#Reproducible miRNA binding sites for the top59 CLIP-detected miRNAs. Called: using microMUMMIE on PARalyzer-derived cluster for AGO1 PARCLIP replicates 1 and 2 separately and restricted to 3'UTR cooridnates #microMUMMIE variance levels indicate stringency levels ( most 0.5 > 0.25 > 0.2 > 0.15 > 0.1 > 0.01 least) microMUMMIE_var miRNA_R1 type_R1 seq_R1 Chr start end strand info porbability_R1 porbability_R2 porbability_mean porbability_sd gene_R1 transcriptid_R1 utr_start_R1 utr_end_R1 Chr_cluster_R1 Strand_cluster_R1 Start_cluster_R1 End_cluster_R1 Aligned_to_cluster_R1 GeneName_cluster_R1 AnnotationSource_R1 ClusterID_R1 ClusterSequence_R1 ReadCount_cluster_R1 ModeLocation_R1 ModeScore_R1 ConversionLocationCount_R1 ConversionEventCount_R1 NonConversionEventCount_R1 T2Cfraction_R1 ConversionSpecificity_R1 endG_fraction_R1 RedundantSeqFraction_R1 RedundantCopyFraction_R1 UniqueReads_R1 None_R1 Other_1_R1 T2C_1_R1 Link_R1 overlap_mirTOcluster_R1 gene_R2 transcriptid_R2 utr_start_R2 utr_end_R2 seq_R2 type_R2 miRNA_R2 Chr_cluster_R2 Strand_cluster_R2 Start_cluster_R2 End_cluster_R2 Aligned_to_cluster_R2 GeneName_cluster_R2 AnnotationSource_R2 ClusterID_R2 ClusterSequence_R2 ReadCount_cluster_R2 ModeLocation_R2 ModeScore_R2 ConversionLocationCount_R2 ConversionEventCount_R2 NonConversionEventCount_R2 T2Cfraction_R2 ConversionSpecificity_R2 endG_fraction_R2 RedundantSeqFraction_R2 RedundantCopyFraction_R2 UniqueReads_R2 None_R2 Other_1_R2 T2C_1_R2 Link_R2 overlap_mirTOcluster_R2 seedCov ORDER gene_id expected_counts FPKM TPM SeedCov_by_expectedCounts SeedCov_by_FPKM SeedCov_by_TPM offset_R1 offset_R2 offset 0.01 dme-miR-2b-2-5p 6mer2-7 TGAAGA 2L 10008145 10008150 + 2L_10008145_10008150_+ 1 0.86246735 0.931233675 0.097250234 CG4747 FBtr0079930|FBtr0303902 10007765|10007765 10008889|10008889 2L + 10008106 10008174 3'utr CG4747 FlyBase G3639.1 TGAAGAGCGCTTGGGTGAGTGTGTTCAACAGCTGGCGGATGAAGAGCACAATCTTTCCGGGATCACTTC 15 10008160 0.746611998 8 14 86 0.947368421 1.255272505 0.052631579 0.133333333 0.315789474 15 1 0 18 2L:10008106-10008174 6 CG4747 FBtr0079930|FBtr0303902 10007765|10007765 10008889|10008889 TGAAGA 6mer2-7 dme-miR-2b-2-5p 2L + 10008067 10008171 3'utr CG4747 FlyBase G2873.2 CGCAGAACCGTGTCGTCCTGCTTTCAACGCAGGAGCCACTGAAGAGCGCTTGGGTGAGTGTGTTCAACAGCTGGCGGATGAAGAGCACAATCTTTCCGGGATCAC 8 10008160 0.971574796 4 7 37 0.923076923 1.079181246 0.692307692 0.375 0.615384615 8 1 0 12 2L:10008067-10008171 6 5.5 1 FBgn0043456 4161.81 159.8633333 245.0833333 0.00132154 0.034404387 0.022441346 -15 -15 -15 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 2L 10008362 10008368 + 2L_10008362_10008368_+ 0.782911824 0.782911824 0.782911824 0 CG4747 FBtr0079930|FBtr0303902 10007765|10007765 10008889|10008889 2L + 10008342 10008391 3'utr CG4747 FlyBase G3640.1 ATACTGCATCCGAATAAAATGTACAAAGCATACTTGTGAAAGACAACGCC 10 10008361 0.930338526 4 9 35 0.916666667 0.740362689 0.083333333 0.2 0.333333333 10 0 1 11 2L:10008342-10008391 7 CG4747 FBtr0079930|FBtr0303902 10007765|10007765 10008889|10008889 GTACAAA 7mer-A1 dme-miR-305-5p 2L + 10008331 10008373 3'utr CG4747 FlyBase G2874.1 AAGTGTATAGAATACTGCATCCGAATAAAATGTACAAAGCATA 6 10008358 0.865282217 3 5 18 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2L:10008331-10008373 7 7 2 FBgn0043456 4161.81 159.8633333 245.0833333 0.00168196 0.043787402 0.028561714 1 4 2.5 0.01 dme-miR-184-3p 6mer3-8 TCCGTC 2L 10011984 10011989 + 2L_10011984_10011989_+ 1 1 1 0 Trp1 FBtr0305986|FBtr0343741 10011911|10011911 10012118|10012118 2L + 10011956 10012010 3'utr Trp1 FlyBase G3649.1 CGAATTTGTATTTATAATTTCTTTTATTTCCGTCGAACTTTTGGTTGTATGTTTT 220 10011983 0.748555056 9 220 2429 1 2.440909082 0.054347826 0.190909091 0.355072464 220 0 0 276 2L:10011956-10012010 6 Trp1 FBtr0305986|FBtr0343741 10011911|10011911 10012118|10012118 TCCGTC 6mer3-8 dme-miR-184-3p 2L + 10011962 10012010 3'utr Trp1 FlyBase G2880.1 TGTATTTATAATTTCTTTTATTTCCGTCGAACTTTTGGTTGTATGTTTT 158 10011983 0.757499048 10 156 1705 0.982300885 2.045322979 0.088495575 0.310126582 0.517699115 158 3 1 222 2L:10011962-10012010 6 188 3 FBgn0011584 1171.806667 85.36666667 131.8133333 0.160436022 2.20226474 1.426259357 1 1 1 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT 2L 10012081 10012086 + 2L_10012081_10012086_+ 1 1 1 0 Trp1 FBtr0305986|FBtr0343741 10011911|10011911 10012118|10012118 2L + 10012025 10012102 3'utr Trp1 FlyBase G3650.1 ATATTGAATAGCGCAAAAGACATACATTAACTTTAGCTTTTAATTGTAAATCCTTTGTTCCTTAATAAATATTATTGT 26 10012079 0.993348097 9 26 317 1 1.505149978 0.125 0.230769231 0.375 26 0 0 32 2L:10012025-10012102 6 Trp1 FBtr0305986|FBtr0343741 10011911|10011911 10012118|10012118 GTTCCT 6mer2-7 dme-miR-276a-3p 2L + 10012026 10012098 3'utr Trp1 FlyBase G2881.1 TATTGAATAGCGCAAAAGACATACATTAACTTTAGCTTTTAATTGTAAATCCTTTGTTCCTTAATAAATATTA 21 10012079 0.992228769 8 19 213 0.870967742 1.431363764 0.225806452 0.380952381 0.580645161 21 4 0 27 2L:10012026-10012098 6 17 4 FBgn0011584 1171.806667 85.36666667 131.8133333 0.014507513 0.199140961 0.128970261 2 2 2 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 10013099 10013104 + 2L_10013099_10013104_+ 1 1 1 0 Trp1 FBtr0079931|FBtr0079932 10012492|10012492 10013170|10013170 2L + 10013080 10013120 3'utr Trp1 FlyBase G3652.1 AAATAAAGCTAGGCAATTCTGATCTGATGTGAGAGATATTT 50 10013099 0.613291843 6 45 346 0.907692308 1.071882007 0.369230769 0.28 0.446153846 50 2 4 59 2L:10013080-10013120 6 Trp1 FBtr0079931|FBtr0079932 10012492|10012492 10013170|10013170 TGATCT 6mer3-8 dme-bantam-3p 2L + 10013065 10013120 3'utr Trp1 FlyBase G2883.1 AATTAACTATTATATAAATAAAGCTAGGCAATTCTGATCTGATGTGAGAGATATTT 53 10013099 0.622704741 8 50 341 0.915662651 1.880813592 0.313253012 0.396226415 0.614457831 53 7 0 76 2L:10013065-10013120 6 49.5 5 FBgn0011584 1171.806667 85.36666667 131.8133333 0.042242463 0.57985162 0.375531054 0 0 0 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 2L 10059636 10059641 + 2L_10059636_10059641_+ 0.999999998 0.999999997 0.999999997 0 Pen FBtr0079937 10059466 10060095 2L + 10059517 10059649 3'utr Pen FlyBase G3662.1 TACACCTTCGACCGCGCTCACACACTATGCCATTGTCAAACATACGCATACTCATCATCACATCTTACAAACATTCCCAAACACTTTGGAGGTATGCATGGAAACACAGGCGAATGCATTAGCTTAAAGTCAT 36 10059635 0.754718326 13 34 177 0.977272727 1.633468456 0.227272727 0.194444444 0.340909091 36 1 0 43 2L:10059517-10059649 6 Pen FBtr0079937 10059466 10060095 TAGCTT 6mer3-8 dme-miR-79-3p 2L + 10059558 10059646 3'utr Pen FlyBase G2895.2 ATACGCATACTCATCATCACATCTTACAAACATTCCCAAACACTTTGGAGGTATGCATGGAAACACAGGCGAATGCATTAGCTTAAAGT 20 10059635 0.96243025 7 19 92 0.962962963 1.414973348 0.148148148 0.3 0.481481481 20 1 0 26 2L:10059558-10059646 6 16.5 6 FBgn0267727 3642.156667 171.07 261.8833333 0.004530283 0.096451745 0.063005155 1 1 1 0.01 dme-miR-8-3p 6mer2-7 AGTATT 2L 10059923 10059928 + 2L_10059923_10059928_+ 1 1 1 0 Pen FBtr0079937 10059466 10060095 2L + 10059771 10060089 3'utr Pen FlyBase G3664.1 CGATGCAACCGCTCGGGCAGCTGCGCTGGCTGGGATCCGTGGATCATAGTATTTCCAGAATCCGTCTGTACAGGGGGCACCTTATGTTTGCGTGTACTAGGCTTTTTATTGGATACGTTTCGAGCTCATTTCGGATATATTTTAGGCTGTTTAGTATTTATTTATGTATACAGGAAACGCTTTTAATCCTCCACCTTCGCGCAAGCATTACAACAACAACAACAACAACAACAACTCATTCCCTTCACACCAGTGTCCTCATTCCCGAATCGCATGTTTATATTCAAAGTTGTCAATAAATAATGAATTGTTTGAATGA 200 10059912 0.991352418 49 185 1976 0.923728814 2.037426498 0.144067797 0.175 0.300847458 200 17 1 218 2L:10059771-10060089 6 Pen FBtr0079937 10059466 10060095 AGTATT 6mer2-7 dme-miR-8-3p 2L + 10059663 10059977 3'utr Pen FlyBase G2896.1 TGGCAAAATCCACTCGCATGAATCCCCATTTAACATACCCGTATTCCTCGCGTTAGACTAGACTTCACAGATTGCAGCATGGATCTTTCTGGCAGTGTTCCTCGTTCACGATGCAACCGCTCGGGCAGCTGCGCTGGCTGGGATCCGTGGATCATAGTATTTCCAGAATCCGTCTGTACAGGGGGCACCTTATGTTTGCGTGTACTAGGCTTTTTATTGGATACGTTTCGAGCTCATTTCGGATATATTTTAGGCTGTTTAGTATTTATTTATGTATACAGGAAACGCTTTTAATCCTCCACCTTCGCGCAAGCA 153 10059912 0.988965294 44 142 1391 0.919491525 1.336459734 0.084745763 0.405228758 0.61440678 153 10 9 217 2L:10059663-10059977 6 64 7 FBgn0267727 3642.156667 171.07 261.8833333 0.017572006 0.374115859 0.244383631 11 11 11 0.01 dme-miR-252-5p 6mer3-8 GTACTT 2L 10121 10126 - 2L_10121_10126_- 0.999988786 0.999999999 0.999994392 7.92E-06 l(2)gl FBtr0078168|FBtr0306591|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0306590|FBtr0078170|FBtr0330655|FBtr0078171|FBtr0306592|FBtr0078166 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11214|11214|11214|11214|11309|11214|11214|11214 2L - 10108 10152 3'utr l(2)gl FlyBase G6257.1 TGAGAAGTAAGTTAATGAGCCTTCAAGTACTTTAGTACATAATGT 25 10137 0.747475541 5 23 187 0.961538462 1.096910013 0.269230769 0.04 0.076923077 25 0 1 25 2L:10108-10152 6 l(2)gl FBtr0306592|FBtr0306590|FBtr0078166|FBtr0330655|FBtr0078171|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0078170|FBtr0078168|FBtr0306591 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11309|11214|11214|11214|11214|11214|11214|11214 GTACTT 6mer3-8 dme-miR-252-5p 2L - 10108 10152 3'utr l(2)gl FlyBase G4879.1 TGAGAAGTAAGTTAATGAGCCTTCAAGTACTTTAGTACATAATGT 13 10121 0.637309891 6 13 93 1 1.322219295 0.142857143 0.461538462 0.666666667 13 0 0 21 2L:10108-10152 6 15 8 FBgn0002121 6538.69 148.3266667 227.85 0.002294037 0.101128141 0.065832785 11 -5 3 0.01 dme-miR-283-5p 7mer-m8 TGATATT 2L 10199632 10199638 - 2L_10199632_10199638_- 0.620203677 0.620203677 0.620203677 0 Ripalpha FBtr0079962 10199399 10199831 2L - 10199604 10199659 3'utr Ripalpha FlyBase G9501.2 AATTTTTGAAACAGTGATACATGATATTCCCCCCCTAATTAATCTAAATCCAAAGA 79 10199633 0.791341577 7 76 563 0.989361702 1.968482949 0.276595745 0.189873418 0.319148936 79 1 0 93 2L:10199604-10199659 7 Ripalpha FBtr0079962 10199399 10199831 TGATATT 7mer-m8 dme-miR-283-5p 2L - 10199561 10199654 3'utr Ripalpha FlyBase G7373.1 TTGAAACAGTGATACATGATATTCCCCCCCTAATTAATCTAAATCCAAAGAATGATATGAGTTATGGCTAGAAATGAGATCTTTAAGCATATTG 34 10199633 0.905026816 5 33 222 0.97826087 1.653212514 0.304347826 0.205882353 0.413043478 34 1 0 45 2L:10199561-10199654 7 52 9 FBgn0032189 194.0066667 18.85 28.7 0.268032026 2.75862069 1.81184669 -5 -5 -5 0.01 dme-bantam-3p 6mer2-7 GATCTC 2L 102021 102026 + 2L_102021_102026_+ 1 1 1 0 Zir FBtr0078103 101917 102086 2L + 101952 102079 3'utr Zir FlyBase G440.1 ATCATACTTTTGGTCTTTCATGTCTAGCGTATCGGATTATTTTAAGTAAATCTTACATTTTAAATTATCGATCTCTATAATTGCTAATGTAATAGCATAACTTTTTTATGCATCTAATAGATTAAGCA 152 102029 0.990765267 18 144 1487 0.952380952 1.954242509 0.259259259 0.171052632 0.333333333 152 8 1 180 2L:101952-102079 6 Zir FBtr0078103 101917 102086 GATCTC 6mer2-7 dme-bantam-3p 2L + 101991 102079 3'utr Zir FlyBase G370.1 TTTTAAGTAAATCTTACATTTTAAATTATCGATCTCTATAATTGCTAATGTAATAGCATAACTTTTTTATGCATCTAATAGATTAAGCA 107 102029 0.974162651 13 97 1051 0.905660377 1.857332496 0.182389937 0.38317757 0.58490566 107 14 1 144 2L:101991-102079 6 122.5 10 FBgn0031216 988 18.33333333 28.1 0.123987854 6.681818182 4.359430605 -8 -8 -8 0.01 dme-miR-34-5p 8mer-A1 CACTGCCA 2L 10202680 10202687 - 2L_10202680_10202687_- 0.678407974 0.678407974 0.678407974 0 CG34159 FBtr0112350 10202518 10202882 2L - 10202635 10202704 3'utr CG34159 FlyBase G9506.1 AAAAAACGATTTAAATCCACTGCCAGCTGAAAGGCAAACCATGATTCAATAAAGTGTACATTGGCAAACG 41 10202689 0.9615275 7 39 196 0.957446809 1.653212514 0.319148936 0.146341463 0.255319149 41 2 0 45 2L:10202635-10202704 8 CG34159 FBtr0112350 10202518 10202882 CACTGCCA 8mer-A1 dme-miR-34-5p 2L - 10202613 10202703 3'utr CG34159 FlyBase G7375.1 AAAAACGATTTAAATCCACTGCCAGCTGAAAGGCAAACCATGATTCAATAAAGTGTACATTGGCAAACGATTTTTATCCCTGGCACCCTGA 15 10202689 0.970356615 5 12 69 0.782608696 0.954242509 0.304347826 0.4 0.608695652 15 4 1 18 2L:10202613-10202703 8 25 11 FBgn0085188 482 64.53 98.53333333 0.05186722 0.387416705 0.253721245 2 2 2 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 2L 10202848 10202853 - 2L_10202848_10202853_- 1 1 1 0 CG34159 FBtr0112350 10202518 10202882 2L - 10202817 10202868 3'utr CG34159 FlyBase G9507.1 ACAGCGGACAACGGCATGTGCTCCATGTGGTAACGATTAATTAAATTATACA 6 10202852 0.970138544 2 5 26 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2L:10202817-10202868 6 CG34159 FBtr0112350 10202518 10202882 ATGTGC 6mer3-8 dme-miR-305-3p 2L - 10202830 10202866 3'utr CG34159 FlyBase G7376.1 AGCGGACAACGGCATGTGCTCCATGTGGTAACGATTA 6 10202843 0.947974797 3 6 28 1 1.041392685 0 0.5 0.727272727 6 0 0 11 2L:10202830-10202866 6 5 12 FBgn0085188 482 64.53 98.53333333 0.010373444 0.077483341 0.050744249 -1 -10 -5.5 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 2L 10204785 10204790 - 2L_10204785_10204790_- 1 1 1 0 CG5734 FBtr0079960 10204755 10205368 2L - 10204764 10204827 3'utr CG5734 FlyBase G9509.1 CTAAACAATGAACTATGAATGTACATTCCCTTATCTGTTGACTCACTTCCAAATAAATGACAAA 21 10204790 0.990806718 8 19 191 0.92 0.884606581 0.04 0.142857143 0.28 21 0 2 23 2L:10204764-10204827 6 CG5734 FBtr0079960 10204755 10205368 TTGACT 6mer3-8 dme-miR-1012-3p 2L - 10204758 10204818 3'utr CG5734 FlyBase G7377.1 GAACTATGAATGTACATTCCCTTATCTGTTGACTCACTTCCAAATAAATGACAAAAATGTT 16 10204790 0.969612823 8 14 138 0.904761905 1.278753601 0.238095238 0.3125 0.476190476 16 2 0 19 2L:10204758-10204818 6 16 13 FBgn0032191 425.53 23.29666667 35.42 0.037600169 0.686793533 0.451722191 0 0 0 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 10205018 10205023 - 2L_10205018_10205023_- 1 1 1 0 CG5734 FBtr0079960 10204755 10205368 2L - 10204970 10205034 3'utr CG5734 FlyBase G9510.1 ACTATTGTAAATGATCTGTAAATGGATGCTCGACGGATACTTTTATCTCTTTTATCATTTCTTGT 17 10205023 0.7975538 8 16 164 0.947368421 0.954242509 0 0.117647059 0.210526316 17 0 1 18 2L:10204970-10205034 6 CG5734 FBtr0079960 10204755 10205368 TGATCT 6mer3-8 dme-bantam-3p 2L - 10204979 10205031 3'utr CG5734 FlyBase G7379.1 ATTGTAAATGATCTGTAAATGGATGCTCGACGGATACTTTTATCTCTTTTATC 20 10205012 0.764931139 6 19 144 0.9375 1.477121255 0.125 0.4 0.625 20 2 0 30 2L:10204979-10205031 6 15 14 FBgn0032191 425.53 23.29666667 35.42 0.035250159 0.643868937 0.423489554 0 -11 -5.5 0.01 dme-miR-1006-3p 7mer-A1 GAATTTA 2L 10256920 10256926 - 2L_10256920_10256926_- 0.823349562 0.823349562 0.823349562 0 Pten FBtr0089905|FBtr0089901 10256317|10256317 10257117|10257117 2L - 10256912 10256960 5'utr Pten FlyBase G9592.1 GATCGATTACAGCTGCGCTCTGCACATCTGTTTAGAATTTAATGTACAT 9 10256931 0.977496252 7 9 66 1 1.041392685 0.181818182 0.222222222 0.363636364 9 0 0 11 2L:10256912-10256960 7 Pten FBtr0089905|FBtr0089901 10256317|10256317 10257117|10257117 GAATTTA 7mer-A1 dme-miR-1006-3p 2L - 10256917 10256962 5'utr Pten FlyBase G7439.1 ACGATCGATTACAGCTGCGCTCTGCACATCTGTTTAGAATTTAATG 8 10256931 0.980928934 5 8 59 1 0.903089987 0.125 0 0 8 0 0 8 2L:10256917-10256962 7 4 15 FBgn0026379 759.45 36.16 55.47 0.00526697 0.110619469 0.072111051 5 5 5 0.01 dme-bantam-3p 6mer2-7 GATCTC 2L 10257077 10257082 - 2L_10257077_10257082_- 1 1 1 0 Pten FBtr0089905|FBtr0089901 10256317|10256317 10257117|10257117 2L - 10257060 10257119 stop_codon Pten FlyBase G9594.1 AATCACCCGAGACGATTTAAAAGACTTCTGGCTGAACGATCTCTTAATTTTGATGTATAA 180 10257075 0.658411447 12 175 1275 0.972972973 2.033423755 0.238738739 0.211111111 0.36036036 180 5 1 216 2L:10257060-10257119 6 Pten FBtr0089905|FBtr0089901 10256317|10256317 10257117|10257117 GATCTC 6mer2-7 dme-bantam-3p 2L - 10257057 10257119 stop_codon Pten FlyBase G7440.2 AATCACCCGAGACGATTTAAAAGACTTCTGGCTGAACGATCTCTTAATTTTGATGTATAAAAC 156 10257075 0.669734764 12 151 1092 0.978070175 2.047274867 0.210526316 0.320512821 0.535087719 156 4 1 223 2L:10257057-10257119 6 129.5 16 FBgn0026379 759.45 36.16 55.47 0.170518138 3.58130531 2.334595277 -7 -7 -7 0.01 dme-miR-33-5p 6mer3-8 CAATGC 2L 10262064 10262069 - 2L_10262064_10262069_- 1 1 1 0 Rsf1 FBtr0333411 10261793 10262815 2L - 10262056 10262085 3'utr Rsf1 FlyBase G9605.1 ACGGCAAAAATCTAGCCAATGCTGCAAGCA 7 10262066 0.726989354 2 7 20 1 1.041392685 0 0.571428571 0.727272727 7 0 0 11 2L:10262056-10262085 6 Rsf1 FBtr0333411 10261793 10262815 CAATGC 6mer3-8 dme-miR-33-5p 2L - 10262057 10262100 3'utr Rsf1 FlyBase G7452.1 TGTAGTTGGGTCGAAACGGCAAAAATCTAGCCAATGCTGCAAGC 7 10262066 0.91261008 3 6 24 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 2L:10262057-10262100 6 6 17 FBgn0011305 436.02 51.88333333 79.38333333 0.013760837 0.115644073 0.075582616 -3 -3 -3 0.01 dme-miR-970-3p 6mer2-7 CTTATG 2L 10317344 10317349 + 2L_10317344_10317349_+ 1 1 1 0 CG4972 FBtr0079988 10317296 10317569 2L + 10317295 10317367 stop_codon CG4972 FlyBase G3754.1 TAGTAACAAAATGGTATTGAGTATAATATTGCGATTGCGAGTAGGGAAACTTATGTTCAAAATTATTTTTCAA 18 10317346 0.982012978 8 17 123 0.952380952 1.301029996 0 0.111111111 0.238095238 18 1 0 20 2L:10317295-10317367 6 CG4972 FBtr0079988 10317296 10317569 CTTATG 6mer2-7 dme-miR-970-3p 2L + 10317296 10317358 stop_codon CG4972 FlyBase G2969.1 AGTAACAAAATGGTATTGAGTATAATATTGCGATTGCGAGTAGGGAAACTTATGTTCAAAATT 18 10317345 0.981129209 4 16 118 0.769230769 1.301029996 0.115384615 0.333333333 0.538461538 18 6 0 20 2L:10317296-10317358 6 11.5 18 FBgn0032217 922.8633333 53.82666667 82.38666667 0.012461217 0.213648749 0.139585693 -2 -1 -1.5 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 2L 10317457 10317462 + 2L_10317457_10317462_+ 1 1 1 0 CG4972 FBtr0079988 10317296 10317569 2L + 10317414 10317504 3'utr CG4972 FlyBase G3755.1 CTGTAGAAATCTGTCCACGTCCATGTCCATGTGGCTATCGAAATTGACTCCTTTTGTTTTAAATGAAAATGGCTCCGATTATCATAAGTAC 18 10317457 0.869035526 9 17 155 0.96 1.380211242 0.04 0.222222222 0.44 18 1 0 24 2L:10317414-10317504 6 CG4972 FBtr0079988 10317296 10317569 TTGACT 6mer3-8 dme-miR-1012-3p 2L + 10317416 10317466 3'utr CG4972 FlyBase G2970.1 GTAGAAATCTGTCCACGTCCATGTCCATGTGGCTATCGAAATTGACTCCTT 7 10317438 0.97806314 3 7 45 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 2L:10317416-10317466 6 4 19 FBgn0032217 922.8633333 53.82666667 82.38666667 0.004334336 0.074312608 0.048551546 0 19 9.5 0.01 dme-miR-252-5p 7mer-m1 TACTTAG 2L 10333024 10333030 + 2L_10333024_10333030_+ 0.702971752 0.702971752 0.702971752 0 CG5037 FBtr0079992 10332970 10333129 2L + 10332992 10333032 3'utr CG5037 FlyBase G3762.1 TAAAATGTTAAGTATCGTGTGAAATTTAAATATACTTAGTG 13 10333017 0.721435231 5 13 107 1 1.255272505 0.055555556 0.230769231 0.444444444 13 0 0 18 2L:10332992-10333032 7 CG5037 FBtr0079992 10332970 10333129 TACTTAG 7mer-m1 dme-miR-252-5p 2L + 10332992 10333044 3'utr CG5037 FlyBase G2976.1 TAAAATGTTAAGTATCGTGTGAAATTTAAATATACTTAGTGTTCTGCAACTTG 9 10333017 0.973890724 4 9 80 1 1.146128036 0.142857143 0.555555556 0.714285714 9 0 0 14 2L:10332992-10333044 7 6.5 20 FBgn0032222 148 12.22666667 18.69333333 0.043918919 0.531624864 0.347717546 7 7 7 0.01 dme-miR-8-3p 7mer-m8 CAGTATT 2L 10338765 10338771 + 2L_10338765_10338771_+ 0.661615243 0.661615243 0.661615243 0 GATAd FBtr0333098 10338407 10339185 2L + 10338740 10338788 3'utr GATAd FlyBase G3783.1 ATTTATATTTATTAAAACCATTTTACAGTATTTTTAATTTTTTAATAAC 17 10338762 0.770127933 7 15 206 0.952380952 1.301029996 0 0.176470588 0.333333333 17 1 0 20 2L:10338740-10338788 7 GATAd FBtr0333098 10338407 10339185 CAGTATT 7mer-m8 dme-miR-8-3p 2L + 10338740 10338785 3'utr GATAd FlyBase G2994.1 ATTTATATTTATTAAAACCATTTTACAGTATTTTTAATTTTTTAAT 8 10338761 0.96382894 3 6 85 0.818181818 0.954242509 0 0.375 0.545454545 8 2 0 9 2L:10338740-10338785 7 11.5 21 FBgn0032223 1151.333333 44.42 68.51 0.009988419 0.258892391 0.167858707 3 4 3.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 10338915 10338921 + 2L_10338915_10338921_+ 0.754178804 0.754178804 0.754178804 0 GATAd FBtr0333098|FBtr0333098|FBtr0333098 10338407|10338407|10338407 10339185|10339185|10339185 2L + 10338870 10338942 3'utr GATAd FlyBase G3784.1 CTAAAAAATAATAATGTTTTAAATCTCTTGCCTATACGAAAATCATGTGATAATATAATAATCTCCACAAAAC 49 10338912 0.909228285 10 46 316 0.954545455 1.799340549 0 0.265306122 0.454545455 49 3 0 63 2L:10338870-10338942 7 GATAd FBtr0333098|FBtr0333098|FBtr0333098 10338407|10338407|10338407 10339185|10339185|10339185 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 10338819 10338939 3'utr GATAd FlyBase G2995.1 AGTTTTAACAATGATTTTTCAGCTGTCTTTGCAATTGAACAACTTCTAAAGCTAAAAAATAATAATGTTTTAAATCTCTTGCCTATACGAAAATCATGTGATAATATAATAATCTCCACAA 40 10338912 0.980032957 11 37 264 0.965517241 1.748188027 0 0.325 0.534482759 40 2 0 56 2L:10338819-10338939 7 37.5 22 FBgn0032223 1151.333333 44.42 68.51 0.032570932 0.844214318 0.547365348 3 3 3 0.01 dme-miR-33-5p 8mer-A1 CAATGCAA 2L 10338981 10338988 + 2L_10338981_10338988_+ 0.634552243 0.634552243 0.634552243 0 GATAd FBtr0333098 10338407 10339185 2L + 10338954 10339014 3'utr GATAd FlyBase G3785.1 AAAACTATGCAAAAAGCAATAATCACGCAATGCAAACTTTTCAAGGAAATATTTAAATTAT 12 10338993 0.97277845 3 12 71 1 1.204119983 0 0.25 0.4375 12 0 0 16 2L:10338954-10339014 8 GATAd FBtr0333098 10338407 10339185 CAATGCAA 8mer-A1 dme-miR-33-5p 2L + 10338978 10339018 3'utr GATAd FlyBase G2996.1 ACGCAATGCAAACTTTTCAAGGAAATATTTAAATTATATAC 9 10338993 0.972825529 3 8 55 0.9 0.653212514 0 0.111111111 0.2 9 0 1 9 2L:10338978-10339018 8 10 23 FBgn0032223 1151.333333 44.42 68.51 0.008685582 0.225123818 0.145964093 -12 -12 -12 0.01 dme-miR-980-5p 7mer-m1 AAAAACT 2L 10339034 10339040 + 2L_10339034_10339040_+ 0.765586663 0.765586663 0.765586663 0 GATAd FBtr0333098 10338407 10339185 2L + 10339025 10339066 3'utr GATAd FlyBase G3786.1 AAGAAACTAAAAAACTTAATGCTGTTTTCGAATCTACATAAA 69 10339050 0.581312782 5 68 529 0.987654321 1.903089987 0.209876543 0.144927536 0.271604938 69 1 0 80 2L:10339025-10339066 7 GATAd FBtr0333098 10338407 10339185 AAAAACT 7mer-m1 dme-miR-980-5p 2L + 10339023 10339070 3'utr GATAd FlyBase G2997.1 ATAAGAAACTAAAAAACTTAATGCTGTTTTCGAATCTACATAAATTGT 53 10339051 0.584910985 4 53 410 1 1.84509804 0.171428571 0.226415094 0.414285714 53 0 0 70 2L:10339023-10339070 7 60 24 FBgn0032223 1151.333333 44.42 68.51 0.052113492 1.350742909 0.875784557 -16 -17 -16.5 0.01 dme-miR-968-5p 6mer3-8 ACTACT 2L 10363887 10363892 + 2L_10363887_10363892_+ 1 1 1 0 pim FBtr0332190|FBtr0080001 10363823|10363823 10364092|10364046 2L + 10363866 10363904 3'utr pim FlyBase G3806.1 TTTTTAGCTAGGTATCTTTGTACTACTAATTAATTATTT 28 10363884 0.718579863 6 28 292 1 1.591064607 0 0.285714286 0.487179487 28 0 0 39 2L:10363866-10363904 6 pim FBtr0332190|FBtr0080001 10363823|10363823 10364092|10364046 ACTACT 6mer3-8 dme-miR-968-5p 2L + 10363868 10363898 3'utr pim FlyBase G3010.1 TTTAGCTAGGTATCTTTGTACTACTAATTAA 20 10363884 0.719897473 2 18 197 0.931034483 1.130333768 0 0.35 0.551724138 20 1 1 27 2L:10363868-10363898 6 23.5 25 FBgn0003087 219.3333333 28.13666667 42.80666667 0.107142857 0.835209098 0.54897991 3 3 3 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 10364060 10364065 + 2L_10364060_10364065_+ 1 1 1 0 pim FBtr0332190 10363823 10364092 2L + 10364038 10364103 3'utr pim FlyBase G3808.1 CAGGCAATTATATGTGTACGATGTACCTCGTTTGGAAGTGATTTTGAATTAAAGCAACTATAAAAA 170 10364080 0.682176502 10 166 1475 0.98206278 2.039414119 0.452914798 0.229411765 0.412556054 170 3 1 219 2L:10364038-10364103 6 pim FBtr0332190 10363823 10364092 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 10364046 10364096 3'utr pim FlyBase G3011.1 TATATGTGTACGATGTACCTCGTTTGGAAGTGATTTTGAATTAAAGCAACT 135 10364080 0.65506144 9 133 1183 0.990147783 2.303196057 0.428571429 0.37037037 0.581280788 135 2 0 201 2L:10364046-10364096 6 116.5 26 FBgn0003087 219.3333333 28.13666667 42.80666667 0.531155015 4.14050468 2.721538701 -20 -20 -20 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 2L 10384820 10384825 - 2L_10384820_10384825_- 0.999793978 0.999573131 0.999683554 0.0001562 Cdk1 FBtr0080051 10384737 10384841 2L - 10384814 10384841 3'utr Cdk1 FlyBase G9760.1 CGTTCGGTATTCTCGTTTGACTTTAACT 9 10384825 0.672188084 4 9 89 1 1.204119983 0.375 0.444444444 0.6875 9 0 0 16 2L:10384814-10384841 6 Cdk1 FBtr0080051 10384737 10384841 TTGACT 6mer3-8 dme-miR-1012-3p 2L - 10384814 10384843 stop_codon Cdk1 FlyBase G7559.1 AACGTTCGGTATTCTCGTTTGACTTTAACT 7 10384825 0.668663115 4 7 69 1 0.954242509 0.666666667 0.285714286 0.444444444 7 0 0 9 2L:10384814-10384843 6 8 27 FBgn0004106 587.3333333 67.51666667 103.53 0.013620885 0.118489262 0.077272288 0 0 0 0.01 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2L 10392262 10392267 + 2L_10392262_10392267_+ 0.999979153 1 0.999989577 1.47E-05 da FBtr0332195|FBtr0332196|FBtr0080008 10392193|10392193|10392193 10393228|10392728|10392787 2L + 10392218 10392278 3'utr da FlyBase G3839.1 CTGGAAATCGTCGTCGTCCCTCTCTTCCATAAAAACCGAATGTATTGAAGGCTCCGCGGCC 11 10392258 0.854687359 7 9 56 0.933333333 1.146128036 0.066666667 0.181818182 0.4 11 1 0 14 2L:10392218-10392278 6 da FBtr0080008|FBtr0332195|FBtr0332196 10392193|10392193|10392193 10392787|10393228|10392728 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2L + 10392226 10392282 3'utr da FlyBase G3035.1 CGTCGTCGTCCCTCTCTTCCATAAAAACCGAATGTATTGAAGGCTCCGCGGCCAAGT 6 10392263 0.950861397 5 6 27 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2L:10392226-10392282 6 4 28 FBgn0000413 2154.396667 82.52666667 127.39 0.001856668 0.048469182 0.031399639 4 -1 1.5 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT 2L 10392546 10392551 + 2L_10392546_10392551_+ 1 1 1 0 da FBtr0332195|FBtr0332196|FBtr0080008 10392193|10392193|10392193 10393228|10392728|10392787 2L + 10392533 10392593 3'utr da FlyBase G3840.2 AACGATTGTATATAGCTGTTCCATTACGTTTAACCTGGGAAGATCTTTTTCGTTTTTTAGA 39 10392556 0.786825866 8 37 356 0.976744186 1.62324929 0.162790698 0.102564103 0.186046512 39 1 0 42 2L:10392533-10392593 6 da FBtr0080008|FBtr0332195|FBtr0332196 10392193|10392193|10392193 10392787|10393228|10392728 AGCTGT 6mer3-8 dme-miR-1008-3p 2L + 10392510 10392603 3'utr da FlyBase G3036.1 ACACACAGAATTGCTCTTTTTAAAACGATTGTATATAGCTGTTCCATTACGTTTAACCTGGGAAGATCTTTTTCGTTTTTTAGAATGTTTGATT 28 10392556 0.987547413 8 28 246 1 1.633468456 0.139534884 0.392857143 0.604651163 28 0 0 43 2L:10392510-10392603 6 22.5 29 FBgn0000413 2154.396667 82.52666667 127.39 0.010443759 0.272639147 0.176622969 -10 -10 -10 0.01 dme-miR-980-5p 7mer-A1 AAAAACA 2L 10392714 10392720 + 2L_10392714_10392720_+ 0.782911319 0.782911291 0.782911305 0 da FBtr0332195|FBtr0080008 10392193|10392193 10393228|10392787 2L + 10392661 10392753 3'utr da FlyBase G3842.1 AATTACATGCATACATAACGACATAATTAAGTGAAAATAGTTTTATAATAAAAAAAAACACAACACATAGACTTACTTCTATATATTCCCGAG 199 10392728 0.992522131 6 196 964 0.987704918 2.080987047 0.016393443 0.195979899 0.344262295 199 2 1 241 2L:10392661-10392753 7 da FBtr0080008|FBtr0332195 10392193|10392193 10392787|10393228 AAAAACA 7mer-A1 dme-miR-980-5p 2L + 10392689 10392778 3'utr da FlyBase G3037.1 AAGTGAAAATAGTTTTATAATAAAAAAAAACACAACACATAGACTTACTTCTATATATTCCCGAGAGCTAAGGAATAAATATGTCCATAT 98 10392728 0.985005528 6 92 445 0.941176471 1.630088715 0.007352941 0.306122449 0.5 98 6 2 128 2L:10392689-10392778 7 140 30 FBgn0000413 2154.396667 82.52666667 127.39 0.064983391 1.696421359 1.098987362 -14 -14 -14 0.01 dme-miR-980-5p 6mer2-7 AAAAAC 2L 103945 103950 + 2L_103945_103950_+ 0.979220166 0.571856406 0.775538286 0.288049705 CG11377 FBtr0078104 103762 104142 2L + 103927 104080 stop_codon CG11377 FlyBase G447.1 AGAATTGTAAAAGTAACCAAAAACGCACACCTTTTGTAGCCAATTTTACTTTAATAGGTAATATTATCAATTGATATGTAATTATAAATTAGAATTTCAAAAAGCAGGGCATGACCATATTTTTTTACACGTACCACACTTAGATATTTATTTG 65 103960 0.96473516 10 64 320 0.987179487 1.886490725 0.076923077 0.169230769 0.307692308 65 1 0 77 2L:103927-104080 6 CG11377 FBtr0330636|FBtr0078104 103935|103762 104142|104142 AAAAAC 6mer2-7 dme-miR-980-5p 2L + 103936 104005 3'utr CG11377 FlyBase G375.1 AAAGTAACCAAAAACGCACACCTTTTGTAGCCAATTTTACTTTAATAGGTAATATTATCAATTGATATGT 43 103960 0.954909758 6 43 211 1 1.755874856 0.140350877 0.23255814 0.421052632 43 0 0 57 2L:103936-104005 6 46.5 31 FBgn0031217 654.94 54.75666667 84.33333333 0.07099887 0.849211664 0.551383399 -15 -15 -15 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2L 10402800 10402805 + 2L_10402800_10402805_+ 1 1 1 0 Cnot4 FBtr0331638|FBtr0304112 10402769|10402769 10403206|10403206 2L + 10402746 10402832 stop_codon Cnot4 FlyBase G3859.1 TTTAAAAAGCCGTCAATTCGTTTAGCTACAATACATATAAATAATACATTTGTTTACCTGTACTCTTTATTAAATATTTCTTAAAGT 25 10402806 0.974140162 8 24 271 1 1.531478917 0 0.32 0.5 25 0 0 34 2L:10402746-10402832 6 Cnot4 FBtr0331638|FBtr0080014|FBtr0304112|FBtr0080013|FBtr0304113|FBtr0080010|FBtr0080012|FBtr0331639|FBtr0331637|FBtr0080009|FBtr0080011 10402769|10402769|10402769|10402769|10402769|10402769|10402769|10402769|10402769|10402769|10402769 10403206|10402882|10403206|10402882|10402882|10402882|10402882|10402882|10402882|10402882|10402882 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2L + 10402788 10402812 3'utr Cnot4 FlyBase G3051.1 AATACATTTGTTTACCTGTACTCTT 6 10402798 0.648814865 3 6 57 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2L:10402788-10402812 6 13.5 32 FBgn0051716 2626.393333 88.17666667 135.32 0.005140129 0.153101728 0.099763523 -6 2 -2 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2L 104098 104104 - 2L_104098_104104_- 0.521223855 0.521223855 0.521223855 0 Nhe1 FBtr0301452 103960 104472 2L - 104079 104166 3'utr Nhe1 FlyBase G6295.1 AAAGCACACTACGTCAGTAATTTTAGTTAAAAATATTTATTCATACGAATATATGCTGTATTTGTGATTTTATACATTTTTGAAACCA 191 104105 0.992929741 16 182 2151 0.960869565 1.742332282 0.126086957 0.183246073 0.32173913 191 6 3 221 2L:104079-104166 7 Nhe1 FBtr0301452 103960 104472 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 104081 104130 3'utr Nhe1 FlyBase G4915.1 TTATTCATACGAATATATGCTGTATTTGTGATTTTATACATTTTTGAAAC 131 104105 0.595449411 9 123 1487 0.945355191 1.635986112 0.202185792 0.34351145 0.530054645 131 7 3 173 2L:104081-104130 7 155 33 FBgn0026787 273.9133333 13.01 19.93 0.565872417 11.91391238 7.777220271 1 1 1 0.01 dme-miR-7-5p 6mer3-8 GTCTTC 2L 104190 104195 - 2L_104190_104195_- 1 1 1 0 Nhe1 FBtr0301452 103960 104472 2L - 104169 104258 3'utr Nhe1 FlyBase G6296.1 TCGTATCACTGTAGCTCCTTTATTAATCCGCTTAAAGCAGTATTACATTGCACACGACAGATGGTCTTCAAAATGAAAATTTGGACGTCA 12 104197 0.985675634 8 11 81 0.875 1.146128036 0 0.333333333 0.5 12 2 0 14 2L:104169-104258 6 Nhe1 FBtr0301452 103960 104472 GTCTTC 6mer3-8 dme-miR-7-5p 2L - 104168 104258 3'utr Nhe1 FlyBase G4916.1 TCGTATCACTGTAGCTCCTTTATTAATCCGCTTAAAGCAGTATTACATTGCACACGACAGATGGTCTTCAAAATGAAAATTTGGACGTCAC 19 104197 0.971953748 7 17 132 0.961538462 1.397940009 0.230769231 0.368421053 0.538461538 19 1 0 25 2L:104168-104258 6 7 34 FBgn0026787 273.9133333 13.01 19.93 0.025555529 0.538047656 0.351229303 2 2 2 0.01 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2L 10420 10425 - 2L_10420_10425_- 1 1 1 0 l(2)gl FBtr0078168|FBtr0306591|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0306590|FBtr0078170|FBtr0330655|FBtr0078171|FBtr0306592|FBtr0078166 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11214|11214|11214|11214|11309|11214|11214|11214 2L - 10403 10480 3'utr l(2)gl FlyBase G6259.2 AACAAATTAGGAGTACAAAAAATAGCCTGATGCAAGGATGGGGAGAAAAAAGACCTTGAAGTTCAAAAGAATTTGTTG 69 10424 0.923055201 8 68 224 0.987341772 1.892094603 0.113924051 0.144927536 0.253164557 69 1 0 78 2L:10403-10480 6 l(2)gl FBtr0306592|FBtr0306590|FBtr0078166|FBtr0330655|FBtr0078171|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0078170|FBtr0078168|FBtr0306591 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11309|11214|11214|11214|11214|11214|11214|11214 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2L - 10385 10476 3'utr l(2)gl FlyBase G4881.1 AATTAGGAGTACAAAAAATAGCCTGATGCAAGGATGGGGAGAAAAAAGACCTTGAAGTTCAAAAGAATTTGTTGTATCAAATCCTCAATAAG 40 10424 0.949488326 7 35 153 0.875 1.748188027 0.15625 0.45 0.65625 40 8 0 56 2L:10385-10476 6 25.5 35 FBgn0002121 6538.69 148.3266667 227.85 0.003899864 0.171917839 0.111915734 -1 -1 -1 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2L 10420744 10420750 - 2L_10420744_10420750_- 0.661615511 0.661615511 0.661615511 0 pie FBtr0080046|FBtr0333490 10420709|10420623 10420827|10420827 2L - 10420726 10420774 3'utr pie FlyBase G9792.1 GTGGGAATTAATTCGTCATAGAATTCTAGTCTCTTTATGCATATATTGT 81 10420751 0.823378966 6 80 765 1 1.991226076 0.112244898 0.185185185 0.326530612 81 0 0 98 2L:10420726-10420774 7 pie FBtr0080046|FBtr0333490 10420709|10420623 10420827|10420827 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2L - 10420739 10420774 3'utr pie FlyBase G7582.1 GTGGGAATTAATTCGTCATAGAATTCTAGTCTCTTT 66 10420751 0.820491423 3 63 577 0.965909091 1.929418926 0.170454545 0.257575758 0.443181818 66 3 0 85 2L:10420739-10420774 7 72 36 FBgn0005683 197.3333333 11.90333333 18.10333333 0.364864865 6.048725847 3.977168109 1 1 1 0.01 dme-miR-317-5p 6mer3-8 GTATCC 2L 10428292 10428297 + 2L_10428292_10428297_+ 1 1 1 0 KdelR FBtr0080023 10427808 10428632 2L + 10428271 10428373 3'utr KdelR FlyBase G3892.1 TAAATAGCTCTTAAGTCGACTGTATCCTAAAAATCCGAGTAAAGTTAAGTCTTATTGTGTGGCTAATAGTAAAGTAAATGATGAGCGATGTCAACATATAATA 36 10428293 0.738596182 13 34 268 0.930232558 1.602059991 0.093023256 0.166666667 0.302325581 36 3 0 40 2L:10428271-10428373 6 KdelR FBtr0080023 10427808 10428632 GTATCC 6mer3-8 dme-miR-317-5p 2L + 10428260 10428350 3'utr KdelR FlyBase G3080.1 AAGTTATGCATTAAATAGCTCTTAAGTCGACTGTATCCTAAAAATCCGAGTAAAGTTAAGTCTTATTGTGTGGCTAATAGTAAAGTAAATG 24 10428293 0.982830603 8 22 170 0.96969697 1.204119983 0.090909091 0.291666667 0.484848485 24 0 1 32 2L:10428260-10428350 6 18 37 FBgn0267330 1541.713333 135.1766667 206.4166667 0.011675322 0.133159076 0.087202261 -1 -1 -1 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 2L 10428418 10428423 + 2L_10428418_10428423_+ 1 1 1 0 KdelR FBtr0080023 10427808 10428632 2L + 10428409 10428435 3'utr KdelR FlyBase G3893.1 AGGAACTCCATGTGCTGTTTTGCACAA 6 10428427 0.633166599 4 6 41 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2L:10428409-10428435 6 KdelR FBtr0080023 10427808 10428632 ATGTGC 6mer3-8 dme-miR-305-3p 2L + 10428392 10428437 3'utr KdelR FlyBase G3081.1 ATAGGCCGCAGGATCGTAGGAACTCCATGTGCTGTTTTGCACAACT 5 10428429 0.981341527 3 4 28 0.571428571 0.602059991 0 0.2 0.428571429 5 3 0 4 2L:10428392-10428437 6 4.5 38 FBgn0267330 1541.713333 135.1766667 206.4166667 0.002918831 0.033289769 0.021800565 -9 -11 -10 0.01 dme-miR-283-5p 7mer-A1 GATATTA 2L 10428606 10428612 + 2L_10428606_10428612_+ 0.782911824 0.782911824 0.782911824 0 KdelR FBtr0080023 10427808 10428632 2L + 10428585 10428622 3'utr KdelR FlyBase G3894.1 AATATTTTAAACACTTTTGCAGATATTATATTATAAAC 14 10428601 0.755408105 4 13 142 0.944444444 1.230448921 0 0.214285714 0.388888889 14 1 0 17 2L:10428585-10428622 7 KdelR FBtr0080023 10427808 10428632 GATATTA 7mer-A1 dme-miR-283-5p 2L + 10428585 10428628 3'utr KdelR FlyBase G3083.1 AATATTTTAAACACTTTTGCAGATATTATATTATAAACAAAGTA 13 10428601 0.768237436 4 13 135 1 1.113943352 0 0 0 13 0 0 13 2L:10428585-10428628 7 13.5 39 FBgn0267330 1541.713333 135.1766667 206.4166667 0.008756492 0.099869307 0.065401696 5 5 5 0.01 dme-miR-307a-3p 6mer3-8 GGTTGT 2L 104322 104327 - 2L_104322_104327_- 1 1 1 0 Nhe1 FBtr0301452 103960 104472 2L - 104304 104382 3'utr Nhe1 FlyBase G6297.1 GCTTAAGTTCCTCTAGTTAATATTTTTAGAGTTTTTATTTATATAGCGCGGTGATGGTTGTTATCTTGTGTATATTTTT 70 104328 0.797996234 12 69 647 0.988372093 1.929418926 0.127906977 0.185714286 0.337209302 70 1 0 85 2L:104304-104382 6 Nhe1 FBtr0301452 103960 104472 GGTTGT 6mer3-8 dme-miR-307a-3p 2L - 104306 104353 3'utr Nhe1 FlyBase G4917.1 AGTTTTTATTTATATAGCGCGGTGATGGTTGTTATCTTGTGTATATTT 56 104328 0.792436769 6 53 482 0.952380952 1.903089987 0.047619048 0.303571429 0.535714286 56 4 0 80 2L:104306-104353 6 60.5 40 FBgn0026787 273.9133333 13.01 19.93 0.220872782 4.650269024 3.035624686 1 1 1 0.01 dme-miR-307a-3p 6mer2-7 GTTGTG 2L 104454 104459 - 2L_104454_104459_- 1 1 1 0 Nhe1 FBtr0301452 103960 104472 2L - 104394 104539 stop_codon Nhe1 FlyBase G6298.1 AGATGAATCGGACGAAGAGATAGGACTAGCGGCCAGCACAAGTCAAATTCATTTGACACGGTCGTAGGGATTAAATGGCTGTTGTGGGGGGAGCTCTGTATCCGTTTCGGACTGTGTTGGATAACTTTAGAAGCCAAAGGGAACGA 125 104464 0.982869808 19 117 885 0.929078014 1.640150041 0.304964539 0.12 0.219858156 125 8 2 131 2L:104394-104539 6 Nhe1 FBtr0301452 103960 104472 GTTGTG 6mer2-7 dme-miR-307a-3p 2L - 104410 104536 stop_codon Nhe1 FlyBase G4918.1 TGAATCGGACGAAGAGATAGGACTAGCGGCCAGCACAAGTCAAATTCATTTGACACGGTCGTAGGGATTAAATGGCTGTTGTGGGGGGAGCTCTGTATCCGTTTCGGACTGTGTTGGATAACTTTAG 84 104464 0.996801461 18 80 521 0.964028777 1.649983544 0.309352518 0.511904762 0.705035971 84 3 2 134 2L:104410-104536 6 67.5 41 FBgn0026787 273.9133333 13.01 19.93 0.246428311 5.188316679 3.386853989 5 5 5 0.01 dme-miR-184-3p 6mer3-8 TCCGTC 2L 1050415 1050420 - 2L_1050415_1050420_- 1 1 1 0 S FBtr0077993 1049672 1052037 2L - 1050339 1050438 3'utr S FlyBase G6716.1 TCAGTTACCACACTCGAATCCGTCACAAGAAGAACTATAGAATCGCGACTAAATCACAAACATCACCTTAGTCTAAGTACAGTGCTAATGTCTGTTTTTT 14 1050420 0.957748288 5 11 56 0.894736842 1.230448921 0 0.285714286 0.473684211 14 2 0 17 2L:1050339-1050438 6 S FBtr0077993 1049672 1052037 TCCGTC 6mer3-8 dme-miR-184-3p 2L - 1050360 1050444 3'utr S FlyBase G5252.1 AGTTACTCAGTTACCACACTCGAATCCGTCACAAGAAGAACTATAGAATCGCGACTAAATCACAAACATCACCTTAGTCTAAGTA 10 1050420 0.940524828 5 10 39 1 1.176091259 0.133333333 0.4 0.6 10 0 0 15 2L:1050360-1050444 6 6.5 42 FBgn0003310 666.94 15.53666667 23.95 0.009746004 0.418365158 0.271398747 0 0 0 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 10507952 10507959 - 2L_10507952_10507959_- 0.650171355 0.650171355 0.650171355 0 CG7384 FBtr0080135|FBtr0080135|FBtr0080135 10507857|10507857|10507857 10508086|10508086|10508086 2L - 10507919 10507969 3'utr CG7384 FlyBase G9821.1 CGTACAGAATCTGTGATAGTGCTAACCTGCAATGGCGTCCATAGCATAGTT 8 10507960 0.973488317 3 8 48 1 1.079181246 0.083333333 0.25 0.5 8 0 0 12 2L:10507919-10507969 8 CG7384 FBtr0080135|FBtr0080135|FBtr0080135 10507857|10507857|10507857 10508086|10508086|10508086 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 10507919 10507969 3'utr CG7384 FlyBase G7601.1 CGTACAGAATCTGTGATAGTGCTAACCTGCAATGGCGTCCATAGCATAGTT 6 10507937 0.869989424 2 4 38 0.666666667 0.77815125 0.333333333 0.5 0.666666667 6 3 0 6 2L:10507919-10507969 8 5.5 43 FBgn0032262 8.333333333 0.46 0.726666667 0.66 11.95652174 7.568807339 1 -22 -10.5 0.01 dme-miR-12-5p 7mer-A1 ATACTCA 2L 1051106 1051112 - 2L_1051106_1051112_- 0.823349562 0.823349562 0.823349562 0 S FBtr0077993 1049672 1052037 2L - 1051094 1051137 3'utr S FlyBase G6717.1 GCAAAATCTGCTTTCAACTCATCTCATACTCATAGTTACAACAT 16 1051111 0.743541404 5 15 139 0.941176471 1.204119983 0.235294118 0.0625 0.117647059 16 1 0 16 2L:1051094-1051137 7 S FBtr0077993 1049672 1052037 ATACTCA 7mer-A1 dme-miR-12-5p 2L - 1051099 1051138 3'utr S FlyBase G5253.1 TGCAAAATCTGCTTTCAACTCATCTCATACTCATAGTTAC 8 1051118 0.68791422 4 8 74 1 1.204119983 0 0.625 0.8125 8 0 0 16 2L:1051099-1051138 7 12 44 FBgn0003310 666.94 15.53666667 23.95 0.017992623 0.772366445 0.501043841 -1 6 2.5 0.01 dme-miR-33-5p 8mer-m1 CAATGCAC 2L 10511504 10511511 - 2L_10511504_10511511_- 0.662435351 0.662435351 0.662435351 0 Fatp FBtr0337007|FBtr0080134|FBtr0080133|FBtr0337006 10511251|10510670|10511251|10511251 10511666|10511666|10511666|10511666 2L - 10511486 10511560 3'utr Fatp FlyBase G9823.1 AGATCATTCAGCCTAGGAGAGATGCATCCGAAGCACATTTCCATGTCAACAATGCACTTTTGTATATCGTAAGCA 16 10511504 0.764814363 9 16 102 1 1.230448921 0 0.0625 0.117647059 16 0 0 17 2L:10511486-10511560 8 Fatp FBtr0337007|FBtr0080134|FBtr0080133|FBtr0337006 10511251|10510670|10511251|10511251 10511666|10511666|10511666|10511666 CAATGCAC 8mer-m1 dme-miR-33-5p 2L - 10511485 10511555 3'utr Fatp FlyBase G7603.1 ATTCAGCCTAGGAGAGATGCATCCGAAGCACATTTCCATGTCAACAATGCACTTTTGTATATCGTAAGCAT 8 10511502 0.978195974 7 8 51 1 1.079181246 0.25 0.25 0.5 8 0 0 12 2L:10511485-10511555 8 8 45 FBgn0021953 551.6433333 26.14666667 40.02666667 0.014502124 0.305966344 0.199866755 -7 -9 -8 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 10534 10540 - 2L_10534_10540_- 0.801970437 0.801970437 0.801970437 0 l(2)gl FBtr0078168|FBtr0078168|FBtr0078168|FBtr0306591|FBtr0306591|FBtr0306591|FBtr0078169|FBtr0078169|FBtr0078169|FBtr0078167|FBtr0078167|FBtr0078167|FBtr0306589|FBtr0306589|FBtr0306589|FBtr0306590|FBtr0306590|FBtr0306590|FBtr0078170|FBtr0078170|FBtr0078170|FBtr0330655|FBtr0330655|FBtr0330655|FBtr0078171|FBtr0078171|FBtr0078171|FBtr0306592|FBtr0306592|FBtr0306592|FBtr0078166|FBtr0078166|FBtr0078166 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11309|11309|11309|11214|11214|11214|11214|11214|11214|11214|11214|11214 2L - 10484 10562 3'utr l(2)gl FlyBase G6260.1 CTTTTATTTTCGGTTAAAATATTGTGATACAAAAAAATGCCCTTACAAAATTAGGACAACAACAATTTGCTTTATTATG 220 10541 0.852784174 12 203 1415 0.926199262 1.195553739 0.520295203 0.195454545 0.346863469 220 5 15 251 2L:10484-10562 7 l(2)gl FBtr0306592|FBtr0306592|FBtr0306592|FBtr0306590|FBtr0306590|FBtr0306590|FBtr0078166|FBtr0078166|FBtr0078166|FBtr0330655|FBtr0330655|FBtr0330655|FBtr0078171|FBtr0078171|FBtr0078171|FBtr0078169|FBtr0078169|FBtr0078169|FBtr0078167|FBtr0078167|FBtr0078167|FBtr0306589|FBtr0306589|FBtr0306589|FBtr0078170|FBtr0078170|FBtr0078170|FBtr0078168|FBtr0078168|FBtr0078168|FBtr0306591|FBtr0306591|FBtr0306591 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11214|11214|11214|11214|11214|11214|11309|11309|11309|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 10513 10561 3'utr l(2)gl FlyBase G4883.1 TTTTATTTTCGGTTAAAATATTGTGATACAAAAAAATGCCCTTACAAAA 112 10541 0.695107335 6 103 724 0.909090909 1.273001272 0.557575758 0.357142857 0.563636364 112 8 7 150 2L:10513-10561 7 154 46 FBgn0002121 6538.69 148.3266667 227.85 0.023552118 1.03824891 0.675883257 1 1 1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 10686409 10686414 - 2L_10686409_10686414_- 1 1 1 0 CG7296 FBtr0336850|FBtr0336850|FBtr0336850|FBtr0080129|FBtr0080129|FBtr0080129 10686122|10686122|10686122|10686389|10686389|10686389 10686461|10686461|10686461|10686461|10686461|10686461 2L - 10686390 10686438 3'utr CG7296 FlyBase G9830.1 TTGGAGTTAAGCGATAAGAAATGACTGTGAATAAAACCTAAATAAATTA 71 10686417 0.875728737 5 71 317 1 1.886490725 0.272727273 0.056338028 0.12987013 71 0 0 77 2L:10686390-10686438 6 CG7296 FBtr0336850|FBtr0336850|FBtr0336850|FBtr0080129|FBtr0080129|FBtr0080129 10686122|10686122|10686122|10686389|10686389|10686389 10686461|10686461|10686461|10686461|10686461|10686461 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 10686395 10686438 3'utr CG7296 FlyBase G7608.1 TTGGAGTTAAGCGATAAGAAATGACTGTGAATAAAACCTAAATA 41 10686417 0.836218124 4 40 176 0.981481481 1.72427587 0.185185185 0.243902439 0.425925926 41 1 0 53 2L:10686395-10686438 6 56 47 FBgn0032283 0 0 0 Inf Inf Inf 3 3 3 0.01 dme-miR-1003-3p 6mer2-7 TGTGAG 2L 10740454 10740459 + 2L_10740454_10740459_+ 1 1 1 0 CG12299 FBtr0080113 10740097 10740762 2L + 10740437 10740471 3'utr CG12299 FlyBase G3948.1 AAGATCAAAAGCGATTTTGTGAGCATTCCCAGTAC 9 10740453 0.674570334 2 9 62 1 1 0.1 0.111111111 0.2 9 0 0 10 2L:10740437-10740471 6 CG12299 FBtr0080113 10740097 10740762 TGTGAG 6mer2-7 dme-miR-1003-3p 2L + 10740431 10740469 3'utr CG12299 FlyBase G3121.1 AATCATAAGATCAAAAGCGATTTTGTGAGCATTCCCAGT 7 10740452 0.904794193 3 6 46 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 2L:10740431-10740469 6 8 48 FBgn0032295 396.6833333 14.49 22.2 0.02016722 0.5521049 0.36036036 1 2 1.5 0.01 dme-miR-190-5p 7mer-A1 CATATCA 2L 10740523 10740529 + 2L_10740523_10740529_+ 0.782911824 0.782911824 0.782911824 0 CG12299 FBtr0080113 10740097 10740762 2L + 10740472 10740587 3'utr CG12299 FlyBase G3949.1 AACTTGTGGCACATTTTGGGCAACCGAAAGCGAAATTCCAGTTTTGTATCTCATATCACACGAAGCCCACACGACTAAAGAAGATTGTCCAGGAAATGGACGTATTGTATTTGCAT 9 10740515 0.98653024 7 9 73 1 0.954242509 0.111111111 0 0 9 0 0 9 2L:10740472-10740587 7 CG12299 FBtr0080113 10740097 10740762 CATATCA 7mer-A1 dme-miR-190-5p 2L + 10740503 10740585 3'utr CG12299 FlyBase G3122.1 GAAATTCCAGTTTTGTATCTCATATCACACGAAGCCCACACGACTAAAGAAGATTGTCCAGGAAATGGACGTATTGTATTTGC 10 10740515 0.857128547 6 10 66 1 1.079181246 0.25 0.2 0.333333333 10 0 0 12 2L:10740503-10740585 7 4 49 FBgn0032295 396.6833333 14.49 22.2 0.01008361 0.27605245 0.18018018 8 8 8 0.01 dme-miR-1002-5p 6mer3-8 CTACTT 2L 10740628 10740633 + 2L_10740628_10740633_+ 0.99999783 0.999989022 0.999993426 6.22E-06 CG12299 FBtr0080113 10740097 10740762 2L + 10740607 10740649 3'utr CG12299 FlyBase G3950.1 ACATTTTGTTAGTATTAAGCCCTACTTTATGCTGCTCATTTTA 29 10740635 0.956028688 5 29 284 1 1.505149978 0 0.103448276 0.1875 29 0 0 32 2L:10740607-10740649 6 CG12299 FBtr0080113 10740097 10740762 CTACTT 6mer3-8 dme-miR-1002-5p 2L + 10740616 10740675 3'utr CG12299 FlyBase G3123.1 TAGTATTAAGCCCTACTTTATGCTGCTCATTTTACATCCCAAGGGATATACCCTTACCCA 30 10740635 0.989750407 8 30 290 1 1.698970004 0.04 0.5 0.7 30 0 0 50 2L:10740616-10740675 6 28.5 50 FBgn0032295 396.6833333 14.49 22.2 0.071845721 1.966873706 1.283783784 -7 -7 -7 0.01 dme-miR-33-5p 7mer-A1 AATGCAA 2L 1082999 1083005 + 2L_1082999_1083005_+ 0.782861172 0.782859975 0.782860574 8.49E-07 Atg4a FBtr0332569|FBtr0077953 1082870|1082870 1085380|1083378 2L + 1082920 1083064 3'utr Atg4a FlyBase G955.1 AGCCCAGCCAGGCGAAAGTGGAGCACCCAATGAGGAGAAAGAGAGTGGGCCGGGAGGTCGAGCCCCTGCGGATGCTGCGAATGCAATAAACTAAGGCTAAAGTGCATAATTAGACGAGTGGTTGAGATTTAGATTTTAGTATGTT 70 1083011 0.962291889 14 68 345 0.975609756 1.602059991 0.268292683 0.157142857 0.280487805 70 1 1 80 2L:1082920-1083064 7 Atg4a FBtr0077953|FBtr0332569 1082870|1082870 1083378|1085380 AATGCAA 7mer-A1 dme-miR-33-5p 2L + 1082923 1083062 3'utr Atg4a FlyBase G769.1 CCAGCCAGGCGAAAGTGGAGCACCCAATGAGGAGAAAGAGAGTGGGCCGGGAGGTCGAGCCCCTGCGGATGCTGCGAATGCAATAAACTAAGGCTAAAGTGCATAATTAGACGAGTGGTTGAGATTTAGATTTTAGTATG 37 1083011 0.962104287 12 34 165 0.945454545 1.414973348 0.418181818 0.351351351 0.563636364 37 2 1 52 2L:1082923-1083062 7 34.5 51 FBgn0031298 484.5333333 26.74 40.88333333 0.071202532 1.290201945 0.843864656 -12 -12 -12 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2L 10837965 10837971 - 2L_10837965_10837971_- 0.521223855 0.521223855 0.521223855 0 CG6700 FBtr0301710|FBtr0080187 10837858|10837730 10839315|10839315 2L - 10837942 10837983 3'utr CG6700 FlyBase G9857.1 TATTAGAGGGAGTGTGATTAGAATCCTAACTATTATATTAAA 35 10837965 0.769002304 4 32 261 0.928571429 1.290034611 0.142857143 0.2 0.333333333 35 2 1 39 2L:10837942-10837983 7 CG6700 FBtr0301710|FBtr0080187 10837858|10837730 10839315|10839315 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 10837945 10837989 3'utr CG6700 FlyBase G7624.1 TATTTTTATTAGAGGGAGTGTGATTAGAATCCTAACTATTATATT 34 10837965 0.724236145 5 33 229 0.980769231 1.707570176 0.115384615 0.411764706 0.615384615 34 1 0 51 2L:10837945-10837989 7 34 52 FBgn0032305 1004.78 26.73333333 40.84666667 0.033838253 1.271820449 0.832381263 -6 -6 -6 0.01 dme-miR-7-5p 7mer-m8 GTCTTCC 2L 10838165 10838171 - 2L_10838165_10838171_- 0.705950313 0.705950313 0.705950313 0 CG6700 FBtr0301710|FBtr0080187 10837858|10837730 10839315|10839315 2L - 10838145 10838225 3'utr CG6700 FlyBase G9859.1 CAAAATTATCGGAAGTTCAAACTCAACGTTTTGGAGTATGGCAAATTCAACCTGGTCTTCCCCGTCGCCACTAAACATCCG 14 10838168 0.695837135 6 13 83 0.875 1.146128036 0.0625 0.142857143 0.25 14 2 0 14 2L:10838145-10838225 7 CG6700 FBtr0301710|FBtr0080187 10837858|10837730 10839315|10839315 GTCTTCC 7mer-m8 dme-miR-7-5p 2L - 10838148 10838198 3'utr CG6700 FlyBase G7625.1 GTTTTGGAGTATGGCAAATTCAACCTGGTCTTCCCCGTCGCCACTAAACAT 8 10838168 0.977616939 2 8 61 1 1.041392685 0.090909091 0.25 0.454545455 8 0 0 11 2L:10838148-10838198 7 9 53 FBgn0032305 1004.78 26.73333333 40.84666667 0.008957185 0.336658354 0.220336217 -3 -3 -3 0.01 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 2L 10839257 10839264 - 2L_10839257_10839264_- 0.674982063 0.674982063 0.674982063 0 CG6700 FBtr0301710|FBtr0080187 10837858|10837730 10839315|10839315 2L - 10839045 10839288 3'utr CG6700 FlyBase G9865.1 TGGCATGAAGCCCTATTCGATTTTGTACCTGATTTCCGAGCTTTTCGGATGTTAGTGTCCTTTTTCGGACTGCGGATGCAACTCTCTTGGCCCTGTTTAAAAATTTGTGTATATATTTCTCTAGATCGCGATTCCCTTTCGTTACAAAGTTAGGACTTGAATTACTCCCATTCTTAGGCTGAAGTCTTCGCTTATTTAGGACCAACTGTTCTTCGTAGGGTTTAAAGTTTTTAGATGGAAAATA 304 10839265 0.988364088 32 297 2794 0.980874317 2.254064453 0.163934426 0.174342105 0.31420765 304 6 1 359 2L:10839045-10839288 8 CG6700 FBtr0301710|FBtr0080187 10837858|10837730 10839315|10839315 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2L - 10839237 10839283 3'utr CG6700 FlyBase G7631.1 TGAAGCCCTATTCGATTTTGTACCTGATTTCCGAGCTTTTCGGATGT 116 10839265 0.699534517 11 113 1170 0.971428571 2.230448921 0.177142857 0.379310345 0.588571429 116 5 0 170 2L:10839237-10839283 8 137.5 54 FBgn0032305 1004.78 26.73333333 40.84666667 0.136845877 5.143391521 3.366247756 1 1 1 0.01 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 2L 10847247 10847253 - 2L_10847247_10847253_- 0.822998098 0.788941256 0.805969677 0.024081794 porin FBtr0080183|FBtr0305260 10847225|10847225 10847867|10847867 2L - 10847237 10847272 3'utr porin FlyBase G9878.1 TACCTTTTCGTTGTGCATTTACCTGAGAAATAAATC 26 10847255 0.730343129 3 26 191 1 1.602059991 0.275 0.346153846 0.575 26 0 0 40 2L:10847237-10847272 7 porin FBtr0305260|FBtr0080183 10847225|10847225 10847867|10847867 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2L - 10847242 10847278 3'utr porin FlyBase G7636.1 AATCTTTACCTTTTCGTTGTGCATTTACCTGAGAAAT 17 10847255 0.742718784 3 17 139 1 1.361727836 0.347826087 0.352941176 0.52173913 17 0 0 23 2L:10847242-10847278 7 21.5 55 FBgn0004363 5030.653333 426.6133333 653.96 0.004273799 0.050396925 0.032876629 2 2 2 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2L 10854658 10854663 - 2L_10854658_10854663_- 1 1 1 0 Dnz1 FBtr0080181 10854433 10855186 2L - 10854620 10854746 3'utr Dnz1 FlyBase G9890.1 AATACTACATAGCAATATGTACCGAGCTAGAAACTAAGTCCTTATCAAAAGCATTTACGATATACCCGAAGAATGACGCATATACCAAAAAGGAAATAAAACGGAGATTAAACACTCAAATAGAAAA 31 10854664 0.952298384 10 30 99 0.974358974 1.579783597 0.230769231 0.225806452 0.384615385 31 1 0 38 2L:10854620-10854746 6 Dnz1 FBtr0080181 10854433 10855186 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 10854634 10854679 3'utr Dnz1 FlyBase G7644.1 GAAGAATGACGCATATACCAAAAAGGAAATAAAACGGAGATTAAAC 9 10854664 0.872682275 3 9 18 1 1.041392685 0.272727273 0.111111111 0.272727273 9 0 0 11 2L:10854634-10854679 6 13 56 FBgn0027453 422.0233333 26.38 40.35333333 0.030803984 0.492797574 0.322154304 1 1 1 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2L 10855091 10855097 - 2L_10855091_10855097_- 0.521223855 0.521223855 0.521223855 0 Dnz1 FBtr0080181 10854433 10855186 2L - 10855047 10855165 3'utr Dnz1 FlyBase G9892.1 TTTTGTCCTTGCGTTTGCTGTGCGGCTAAAAGAGCCCCCGAGTGTTTTTAGTTTTTAATCAATGTGTGTGTGATTATTTTTAAACGACCTATCCCCCTGCCCGCAGCCAGTCAAATTGA 26 10855100 0.988266237 12 25 231 0.965517241 1.447158031 0.103448276 0.076923077 0.172413793 26 1 0 28 2L:10855047-10855165 7 Dnz1 FBtr0080181 10854433 10855186 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 10855060 10855120 3'utr Dnz1 FlyBase G7646.1 TTTTAGTTTTTAATCAATGTGTGTGTGATTATTTTTAAACGACCTATCCCCCTGCCCGCAG 18 10855101 0.922126064 6 15 167 0.884615385 1.361727836 0.038461538 0.222222222 0.461538462 18 3 0 23 2L:10855060-10855120 7 11.5 57 FBgn0027453 422.0233333 26.38 40.35333333 0.027249678 0.435936315 0.284982653 3 4 3.5 0.01 dme-miR-277-3p 6mer3-8 TGCATT 2L 10856854 10856859 - 2L_10856854_10856859_- 1 1 1 0 aurB FBtr0080180 10856795 10856872 2L - 10856827 10856865 3'utr aurB FlyBase G9895.1 CGAGTTTGCATTGTGTAACGACTTATTTCAGATTTTACT 15 10856852 0.681237911 6 14 134 0.944444444 1.230448921 0.833333333 0.133333333 0.277777778 15 1 0 17 2L:10856827-10856865 6 aurB FBtr0080180 10856795 10856872 TGCATT 6mer3-8 dme-miR-277-3p 2L - 10856828 10856864 3'utr aurB FlyBase G7648.1 GAGTTTGCATTGTGTAACGACTTATTTCAGATTTTAC 9 10856839 0.898906544 5 7 91 0.785714286 1.041392685 0.357142857 0.444444444 0.642857143 9 3 0 11 2L:10856828-10856864 6 9 58 FBgn0024227 390.6033333 40.1 60.70333333 0.023041278 0.224438903 0.148262039 -7 -20 -13.5 0.01 dme-miR-184-5p 6mer3-8 TGATAA 2L 10861952 10861957 + 2L_10861952_10861957_+ 1 1 1 0 Stam FBtr0080143 10861520 10862006 2L + 10861901 10861966 3'utr Stam FlyBase G3968.1 ATTTAGTGCAGGGGAGATAACTATTATGTATTATGTTTATTGTACGGATTATGATAAATCTAACGA 5 10861942 0.991558347 5 5 47 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 2L:10861901-10861966 6 Stam FBtr0080143 10861520 10862006 TGATAA 6mer3-8 dme-miR-184-5p 2L + 10861939 10861997 3'utr Stam FlyBase G3139.1 ATTGTACGGATTATGATAAATCTAACGAAACGAATCACATTCATTAAAATCATAAAAAT 6 10861941 0.977782694 3 6 43 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2L:10861939-10861997 6 3.5 59 FBgn0027363 547.6 23.29333333 35.73666667 0.006391527 0.150257584 0.097938625 10 11 10.5 0.01 dme-miR-980-3p 6mer2-7 GCAGCT 2L 10965554 10965559 - 2L_10965554_10965559_- 1 1 1 0 CG33129 FBtr0080172|FBtr0340551|FBtr0080171|FBtr0340550|FBtr0080170|FBtr0340552|FBtr0080169 10964903|10964903|10964903|10964903|10964903|10964903|10965138 10965604|10965604|10965604|10965604|10965604|10965604|10965604 2L - 10965507 10965676 stop_codon CG33129 FlyBase G9910.1 ACGCGTAACGCCGCCCTGGAGTACTACAACCAGTTTCACAAAAAGGTCGACGCATACGCCAAGCTCAAATGATTTTAAGCGTCAGGAACGCTTACTTCTCGAACAGCAACATCATCAGCAGCTGCAGCAGATGCAAACAGAATACGCGTCATAGTAAATAGTGAAGGAAG 30 10965562 0.943828422 13 28 112 0.947368421 1.079181246 0.184210526 0.266666667 0.421052632 30 0 2 36 2L:10965507-10965676 6 CG33129 FBtr0080171|FBtr0340551|FBtr0080172|FBtr0080169|FBtr0340552|FBtr0080170|FBtr0340550 10964903|10964903|10964903|10965138|10964903|10964903|10964903 10965604|10965604|10965604|10965604|10965604|10965604|10965604 GCAGCT 6mer2-7 dme-miR-980-3p 2L - 10965499 10965564 3'utr CG33129 FlyBase G7660.1 CATCAGCAGCTGCAGCAGATGCAAACAGAATACGCGTCATAGTAAATAGTGAAGGAAGCCCTAATT 14 10965534 0.953158582 5 11 52 0.777777778 1.146128036 0.166666667 0.214285714 0.388888889 14 4 0 14 2L:10965499-10965564 6 6 60 FBgn0053129 1429.696667 81.02 123.6933333 0.004196694 0.074055789 0.04850706 3 -25 -11 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2L 10981725 10981731 + 2L_10981725_10981731_+ 0.823349562 0.823349562 0.823349562 0 SCAR FBtr0305255|FBtr0305256|FBtr0329949|FBtr0340223|FBtr0080148 10981664|10981664|10981664|10981664|10981664 10982293|10982395|10982395|10982395|10981854 2L + 10981708 10981770 stop_codon SCAR FlyBase G3987.1 AAAAAGAAGAAGTAATTCCAAAGAGAATTAATCCATACGATGGTCGAAACCAAGCGTGGTATG 64 10981723 0.685091898 4 63 203 0.987654321 1.903089987 0.086419753 0.203125 0.37037037 64 1 0 80 2L:10981708-10981770 7 SCAR FBtr0329949|FBtr0305255|FBtr0340223|FBtr0305256 10981664|10981664|10981664|10981664 10982395|10982293|10982395|10982395 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2L + 10981622 10981768 stop_codon SCAR FlyBase G3146.1 ACGACAGCGAGGGCTGGATGGAACCGAACGAAACATCGGCTTGATCCCTGATTAACTCGTTAAAGCCTGACATAATTCTAAAAAACAAAAAGAAGAAGTAATTCCAAAGAGAATTAATCCATACGATGGTCGAAACCAAGCGTGGTA 49 10981723 0.934655962 9 48 182 1 1.880813592 0.026315789 0.408163265 0.618421053 49 0 0 76 2L:10981622-10981768 7 49 61 FBgn0041781 1138.273333 48.57333333 74.31 0.043047657 1.008783969 0.659399812 2 2 2 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 2L 10981930 10981936 + 2L_10981930_10981936_+ 0.620204266 0.620204266 0.620204266 0 SCAR FBtr0305255|FBtr0329950|FBtr0305256|FBtr0329949|FBtr0340223 10981664|10981721|10981664|10981664|10981664 10982293|10982395|10982395|10982395|10982395 2L + 10981849 10982118 3'utr SCAR FlyBase G3988.2 AAAATCAAAAGTTTCATTGAATTGTATATACACCAACGAGTAATTATCGTTAAATTAATCGCTATAGTGAACGAACGCATTTGCATTTTAAGCCTAGACGACAATCCAAGGAAAGCGATTTAAAAGACTTGCTAATTTTGTTCGCTTCTTTGGAGTCAAGGTCTGAGTAGATATGGGCTTCTGTATCATAGTAGTCGGTGTTTGGATATTAAATTATAAATAATCGATATTATCACTGAACTCAATCCTACCCCAACTTGCAATCGATAC 112 10981929 0.983048478 24 105 795 0.939393939 1.394451681 0.21969697 0.151785714 0.28030303 112 4 4 124 2L:10981849-10982118 7 SCAR FBtr0329949|FBtr0305255|FBtr0340223|FBtr0305256|FBtr0329950 10981664|10981664|10981664|10981664|10981721 10982395|10982293|10982395|10982395|10982395 TGCATTT 7mer-m8 dme-miR-277-3p 2L + 10981909 10981986 3'utr SCAR FlyBase G3147.1 GCTATAGTGAACGAACGCATTTGCATTTTAAGCCTAGACGACAATCCAAGGAAAGCGATTTAAAAGACTTGCTAATTT 23 10981929 0.981091321 5 21 148 0.921052632 1.544068044 0.315789474 0.434782609 0.657894737 23 3 0 35 2L:10981909-10981986 7 29 62 FBgn0041781 1138.273333 48.57333333 74.31 0.025477185 0.59703541 0.390257031 1 1 1 0.01 dme-miR-8-3p 6mer3-8 CAGTAT 2L 10982205 10982210 + 2L_10982205_10982210_+ 0.999997736 0.999406562 0.999702149 0.000417971 SCAR FBtr0305255|FBtr0329950|FBtr0305256|FBtr0329949|FBtr0340223 10981664|10981721|10981664|10981664|10981664 10982293|10982395|10982395|10982395|10982395 2L + 10982176 10982221 3'utr SCAR FlyBase G3989.1 ATTAAAATATATCGAACTCCGTAGCATTTCAGTATACTCAACAAGC 12 10982203 0.672943577 5 12 79 1 1.146128036 0.142857143 0.166666667 0.285714286 12 0 0 14 2L:10982176-10982221 6 SCAR FBtr0329949|FBtr0305255|FBtr0340223|FBtr0305256|FBtr0329950 10981664|10981664|10981664|10981664|10981721 10982395|10982293|10982395|10982395|10982395 CAGTAT 6mer3-8 dme-miR-8-3p 2L + 10982183 10982287 3'utr SCAR FlyBase G3149.1 TATATCGAACTCCGTAGCATTTCAGTATACTCAACAAGCTATGAAATTGTATTATCCTTGTGAAAGTTAAATACCTGTATAATTAATAAAATATGTTTCACGAAT 18 10982203 0.982929762 7 17 131 0.903225806 1.447158031 0 0.5 0.709677419 18 3 0 28 2L:10982183-10982287 6 11 63 FBgn0041781 1138.273333 48.57333333 74.31 0.00966376 0.226461707 0.148028529 2 2 2 0.01 dme-miR-8-3p 8mer-A1 CAGTATTA 2L 10989220 10989227 + 2L_10989220_10989227_+ 0.671698124 0.671698124 0.671698124 0 CG12253 FBtr0080149 10989166 10989241 2L + 10989204 10989232 3'utr CG12253 FlyBase G3994.1 TACAATTTGTAACTTTCAGTATTAAAATT 10 10989218 0.713310949 5 10 97 1 1.079181246 0 0.2 0.333333333 10 0 0 12 2L:10989204-10989232 8 CG12253 FBtr0080149 10989166 10989241 CAGTATTA 8mer-A1 dme-miR-8-3p 2L + 10989207 10989233 3'utr CG12253 FlyBase G3150.1 AATTTGTAACTTTCAGTATTAAAATTA 5 10989218 0.750055121 2 4 44 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2L:10989207-10989233 8 7.5 64 FBgn0026148 79.66666667 7.916666667 12.16 0.094142259 0.947368421 0.616776316 2 2 2 0.01 dme-miR-2a-2-5p 8mer-A1 TGATGAGA 2L 11013291 11013298 - 2L_11013291_11013298_- 0.601217767 0.601217767 0.601217767 0 Samuel FBtr0080161|FBtr0331197 11013204|11013204 11014199|11014199 2L - 11013271 11013315 3'utr Samuel FlyBase G9962.1 TTTCTACAAAATAGGCATGATGAGAATGAACTTGATTTATTTTAT 66 11013295 0.84673306 4 65 303 1 1.913813852 0.024390244 0.196969697 0.353658537 66 0 0 82 2L:11013271-11013315 8 Samuel FBtr0080161|FBtr0331197 11013204|11013204 11014199|11014199 TGATGAGA 8mer-A1 dme-miR-2a-2-5p 2L - 11013269 11013308 3'utr Samuel FlyBase G7697.1 AAAATAGGCATGATGAGAATGAACTTGATTTATTTTATAC 42 11013295 0.908976223 4 40 185 0.971428571 1.832508913 0.014285714 0.404761905 0.642857143 42 2 0 68 2L:11013269-11013308 8 52.5 65 FBgn0032330 367.82 9.873333333 15.09333333 0.142732858 5.31735314 3.47835689 -3 -3 -3 0.01 dme-miR-7-5p 8mer-A1 GTCTTCCA 2L 11013949 11013956 - 2L_11013949_11013956_- 0.675381664 0.675381664 0.675381664 0 Samuel FBtr0080161|FBtr0331197 11013204|11013204 11014199|11014199 2L - 11013943 11013978 3'utr Samuel FlyBase G9966.1 GAGAAACAACAATAATCGCAAAGTCTTCCATTTGCA 5 11013948 0.963936234 3 5 30 1 0.698970004 0.2 0 0 5 0 0 5 2L:11013943-11013978 8 Samuel FBtr0080161|FBtr0331197 11013204|11013204 11014199|11014199 GTCTTCCA 8mer-A1 dme-miR-7-5p 2L - 11013944 11013976 3'utr Samuel FlyBase G7699.1 GAAACAACAATAATCGCAAAGTCTTCCATTTGC 5 11013950 0.885494638 4 5 27 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 2L:11013944-11013976 8 5 66 FBgn0032330 367.82 9.873333333 15.09333333 0.013593606 0.506414585 0.331272085 -8 -6 -7 0.01 dme-miR-1007-3p 7mer-m8 TGAGCTT 2L 11014119 11014125 - 2L_11014119_11014125_- 0.618577907 0.618985328 0.618781617 0.000288075 Samuel FBtr0080161|FBtr0331197 11013204|11013204 11014199|11014199 2L - 11014100 11014150 3'utr Samuel FlyBase G9968.1 TCACCTGCTAAAATGCTGAACCAAATGAGCTTTCAACACAATTAAGAAAGG 131 11014125 0.946624692 5 130 563 1 2.195899652 0.420382166 0.167938931 0.305732484 131 0 0 157 2L:11014100-11014150 7 Samuel FBtr0080161|FBtr0331197 11013204|11013204 11014199|11014199 TGAGCTT 7mer-m8 dme-miR-1007-3p 2L - 11014110 11014141 3'utr Samuel FlyBase G7700.1 AAAATGCTGAACCAAATGAGCTTTCAACACAA 86 11014125 0.949480115 2 86 351 1 2.08278537 0.595041322 0.302325581 0.504132231 86 0 0 121 2L:11014110-11014141 7 108 67 FBgn0032330 367.82 9.873333333 15.09333333 0.29362188 10.93855503 7.155477032 0 0 0 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2L 1103593 1103598 - 2L_1103593_1103598_- 1 1 1 0 mtRNApol FBtr0077989|FBtr0332273 1103481|1103252 1103690|1103690 2L - 1103574 1103618 3'utr mtRNApol FlyBase G6728.1 TGAACAATTCGGCTTTCGATACCAAAAAACACGAAGGAAGACAGA 54 1103599 0.977377824 4 54 209 1 1.785329835 0.147540984 0.111111111 0.213114754 54 0 0 61 2L:1103574-1103618 6 mtRNApol FBtr0332273|FBtr0077989 1103252|1103481 1103690|1103690 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 1103569 1103618 3'utr mtRNApol FlyBase G5258.1 TGAACAATTCGGCTTTCGATACCAAAAAACACGAAGGAAGACAGAAGCTA 36 1103599 0.974249827 4 35 140 0.981132075 1.414973348 0.094339623 0.25 0.490566038 36 0 1 52 2L:1103569-1103618 6 44 68 FBgn0261938 910.7533333 24.69666667 38.17333333 0.048311654 1.781616952 1.152637094 1 1 1 0.01 dme-miR-965-3p 6mer2-7 ACGCTT 2L 11095578 11095583 - 2L_11095578_11095583_- 1 0.999996528 0.999998264 2.47E-06 Ge-1 FBtr0080232|FBtr0080231 11095148|11095351 11095687|11095687 2L - 11095563 11095603 3'utr Ge-1 FlyBase G9972.1 ACAAACACATTTATAAATACACGCTTGTAGTTAAGTCCAAA 9 11095586 0.849635666 3 8 73 0.888888889 0.903089987 0 0 0 9 1 0 8 2L:11095563-11095603 6 Ge-1 FBtr0080232|FBtr0080231 11095148|11095351 11095687|11095687 ACGCTT 6mer2-7 dme-miR-965-3p 2L - 11095520 11095601 3'utr Ge-1 FlyBase G7701.1 AAACACATTTATAAATACACGCTTGTAGTTAAGTCCAAAAAGAAGTTAGTATGCTAAAAAGCTCTCAGCTAAGTTCATCCCT 10 11095576 0.987074551 6 9 73 0.842105263 1.204119983 0 0.6 0.789473684 10 3 0 16 2L:11095520-11095601 6 8 69 FBgn0032340 1621.653333 39.62666667 60.70666667 0.004933237 0.201884253 0.131781243 3 -7 -2 0.01 dme-miR-277-3p 6mer3-8 TGCATT 2L 11101954 11101959 - 2L_11101954_11101959_- 0.999695923 1 0.999847961 0.000215031 Reps FBtr0306139|FBtr0080230 11100961|11100961 11102626|11102626 2L - 11101914 11101997 3'utr Reps FlyBase G9992.1 AGAAACACCAGCGATGGATCTGATAGCTCGTCCGTTTATGCATTGAAGTTGCTAATTTAATTTGTAGGCTAGTTAAATCTCAAG 16 11101983 0.976135704 8 16 101 1 1.230448921 0.058823529 0.0625 0.117647059 16 0 0 17 2L:11101914-11101997 6 Reps FBtr0306139|FBtr0080230 11100961|11100961 11102626|11102626 TGCATT 6mer3-8 dme-miR-277-3p 2L - 11101955 11101997 3'utr Reps FlyBase G7718.1 AGAAACACCAGCGATGGATCTGATAGCTCGTCCGTTTATGCAT 8 11101982 0.948614366 4 8 39 1 1 0.1 0.25 0.4 8 0 0 10 2L:11101955-11101997 4 2.5 70 FBgn0032341 1121.163333 28.39333333 43.52333333 0.002229827 0.088048838 0.057440453 24 23 23.5 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 11102606 11102611 - 2L_11102606_11102611_- 1 1 1 0 Reps FBtr0306139|FBtr0080230 11100961|11100961 11102626|11102626 2L - 11102552 11102629 stop_codon Reps FlyBase G9994.1 TAAGCAGCGAAAATGATCATGTGAATGAGGGTGAATCGATTTATTTTTGGGCGATATGTGACTTTCGTTTGCCTGTGT 16 11102604 0.978453119 5 15 106 0.9375 1.176091259 0.375 0 0 16 1 0 15 2L:11102552-11102629 6 Reps FBtr0306139|FBtr0080230 11100961|11100961 11102626|11102626 ATGTGA 6mer3-8 dme-miR-1003-3p 2L - 11102555 11102620 3'utr Reps FlyBase G7719.1 AAAATGATCATGTGAATGAGGGTGAATCGATTTATTTTTGGGCGATATGTGACTTTCGTTTGCCTG 13 11102604 0.896656608 5 12 87 0.904761905 0.801632346 0 0.384615385 0.619047619 13 0 2 19 2L:11102555-11102620 6 11.5 71 FBgn0032341 1121.163333 28.39333333 43.52333333 0.010257203 0.405024654 0.264226086 -7 -7 -7 0.01 dme-miR-965-3p 7mer-m8 TACGCTT 2L 11110556 11110562 + 2L_11110556_11110562_+ 0.620204855 0.620204855 0.620204855 0 l(2)gd1 FBtr0080197|FBtr0306138 11110434|11110434 11110851|11110851 2L + 11110512 11110605 3'utr l(2)gd1 FlyBase G4062.1 GTTTGTAAATATCCCTCACAGAAAATTCAATTTATCTAAGTATGTACGCTTTTGCCGATTCCTTCGCAGGAAGAAGGCATTTATATATTACGAA 155 11110563 0.989691289 10 145 1420 0.936507937 1.645913275 0.264550265 0.167741935 0.317460317 155 9 3 177 2L:11110512-11110605 7 l(2)gd1 FBtr0306138|FBtr0080197 11110434|11110434 11110851|11110851 TACGCTT 7mer-m8 dme-miR-965-3p 2L + 11110521 11110625 3'utr l(2)gd1 FlyBase G3192.1 TATCCCTCACAGAAAATTCAATTTATCTAAGTATGTACGCTTTTGCCGATTCCTTCGCAGGAAGAAGGCATTTATATATTACGAACACAACACATATAATGTACT 77 11110563 0.987945002 16 74 663 0.975 2.068185862 0.15 0.337662338 0.575 77 3 0 117 2L:11110521-11110625 7 104.5 72 FBgn0261983 621.6366667 24.99666667 38.09666667 0.168104627 4.180557408 2.743022137 -7 -7 -7 0.01 dme-miR-283-5p 7mer-m8 TGATATT 2L 11110662 11110668 + 2L_11110662_11110668_+ 0.620203677 0.620203677 0.620203677 0 l(2)gd1 FBtr0080197|FBtr0306138 11110434|11110434 11110851|11110851 2L + 11110653 11110715 3'utr l(2)gd1 FlyBase G4064.1 ATGTATATATGATATTGCCGGCGTTAAGGCGAAGGCGCAAGTCCAGAAGATTGTGCCGGTGAA 10 11110667 0.747844062 7 8 49 0.916666667 1.041392685 0.083333333 0.2 0.333333333 10 1 0 11 2L:11110653-11110715 7 l(2)gd1 FBtr0306138|FBtr0080197 11110434|11110434 11110851|11110851 TGATATT 7mer-m8 dme-miR-283-5p 2L + 11110651 11110719 3'utr l(2)gd1 FlyBase G3193.1 ATATGTATATATGATATTGCCGGCGTTAAGGCGAAGGCGCAAGTCCAGAAGATTGTGCCGGTGAAGTCA 8 11110676 0.886655924 6 8 31 1 1.079181246 0.166666667 0.25 0.5 8 0 0 12 2L:11110651-11110719 7 4.5 73 FBgn0261983 621.6366667 24.99666667 38.09666667 0.007238955 0.180024003 0.11812057 -5 -14 -9.5 0.01 dme-miR-79-3p 7mer-m8 TAGCTTT 2L 11110789 11110795 + 2L_11110789_11110795_+ 0.620204031 0.620204031 0.620204031 0 l(2)gd1 FBtr0080197|FBtr0306138 11110434|11110434 11110851|11110851 2L + 11110760 11110806 3'utr l(2)gd1 FlyBase G4065.1 ACTAGCGCCTAGCCGAAACCTGATTATGTTAGCTTTCACATTGCATA 15 11110787 0.741500413 4 14 119 0.875 1.146128036 0 0.066666667 0.125 15 2 0 14 2L:11110760-11110806 7 l(2)gd1 FBtr0306138|FBtr0080197 11110434|11110434 11110851|11110851 TAGCTTT 7mer-m8 dme-miR-79-3p 2L + 11110754 11110801 3'utr l(2)gd1 FlyBase G3194.1 CGGTCCACTAGCGCCTAGCCGAAACCTGATTATGTTAGCTTTCACATT 12 11110787 0.98590921 2 11 96 0.9375 1.176091259 0 0.333333333 0.5 12 1 0 15 2L:11110754-11110801 7 11 74 FBgn0261983 621.6366667 24.99666667 38.09666667 0.017695224 0.440058674 0.288739172 2 2 2 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 2L 11144 11149 - 2L_11144_11149_- 1 1 1 0 l(2)gl FBtr0078168|FBtr0306591|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0306590|FBtr0078170|FBtr0330655|FBtr0078171|FBtr0306592|FBtr0078166 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11214|11214|11214|11214|11309|11214|11214|11214 2L - 11126 11211 3'utr l(2)gl FlyBase G6264.1 TGACAGAAGCCGTAACCTACTAATTATTTTATACCTTTACAGAAATACGACGCAAACGAGTACTAGTCCTGATGTAATTTAATCTA 132 11150 0.942780601 10 126 653 0.956521739 1.710399466 0.167701863 0.174242424 0.322981366 132 5 2 154 2L:11126-11211 6 l(2)gl FBtr0306592|FBtr0306590|FBtr0078166|FBtr0330655|FBtr0078171|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0078170|FBtr0078168|FBtr0306591 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11309|11214|11214|11214|11214|11214|11214|11214 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 2L - 11075 11173 3'utr l(2)gl FlyBase G4888.1 ACAGAAATACGACGCAAACGAGTACTAGTCCTGATGTAATTTAATCTATAATTACAAACATGTCTCACTAAAAATCGAACGGGGACAGCAAAATAGGAA 109 11142 0.961532016 8 105 523 0.97752809 1.939519253 0.101123596 0.412844037 0.640449438 109 3 1 174 2L:11075-11173 6 115 75 FBgn0002121 6538.69 148.3266667 227.85 0.017587621 0.775315745 0.504718016 1 -7 -3 0.01 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 2L 1115025 1115030 - 2L_1115025_1115030_- 1 1 1 0 Pino FBtr0077988|FBtr0332272|FBtr0077987 1114652|1114652|1114652 1115733|1115733|1115733 2L - 1114991 1115038 3'utr Pino FlyBase G6742.1 AGCTGCGATGGTGCCGGCGGAGGGTTCAGTGAGCGAAGAAAGAAGAAT 9 1115011 0.900475457 4 9 24 1 1.113943352 0.384615385 0.333333333 0.538461538 9 0 0 13 2L:1114991-1115038 6 Pino FBtr0077988|FBtr0332272|FBtr0077987 1114652|1114652|1114652 1115733|1115733|1115733 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 2L - 1114984 1115062 3'utr Pino FlyBase G5269.1 GCTCCGCGGGCACAGATCAAAGCTAGCTGCGATGGTGCCGGCGGAGGGTTCAGTGAGCGAAGAAAGAAGAATCTTCCAG 11 1115011 0.932420805 5 9 35 0.923076923 1.079181246 0.307692308 0.181818182 0.307692308 11 1 0 12 2L:1114984-1115062 6 7.5 76 FBgn0016926 853.46 50.28 77.25 0.008787758 0.149164678 0.097087379 -19 -19 -19 0.01 dme-miR-184-5p 6mer3-8 TGATAA 2L 1115278 1115283 - 2L_1115278_1115283_- 1 1 1 0 Pino FBtr0077988|FBtr0332272|FBtr0077987 1114652|1114652|1114652 1115733|1115733|1115733 2L - 1115161 1115466 3'utr Pino FlyBase G6744.1 GTTTTATGATTTCACCGGTATCGTTTTCGTTCCGATTCGTTGTGTGACAGTGCAAATATTTAGCAACTAAGTTAGTTCCTTTGTTTACCTTCCAATGGCACCATTTGGTTTGCGCACATTACCTGTTCTATCCAGGAGAAGACTTCTTTCTGCCTAGACTTAAGCCGAGTTTAGGCAATGCAGTGATAACGGTGATATTAGCCAGAAAGAATCGTGAGCAAATAGTGAATTTACATGATGTAGCAAATGTCTAACGATAGCTATAGATCGACATGAGATGATCATTTTTGTATAACCCCACACGCA 443 1115288 0.971095918 61 427 2948 0.965973535 2.106360909 0.228733459 0.162528217 0.298676749 443 15 3 511 2L:1115161-1115466 6 Pino FBtr0077988|FBtr0332272|FBtr0077987 1114652|1114652|1114652 1115733|1115733|1115733 TGATAA 6mer3-8 dme-miR-184-5p 2L - 1115224 1115474 3'utr Pino FlyBase G5271.2 AATCTTTTGTTTTATGATTTCACCGGTATCGTTTTCGTTCCGATTCGTTGTGTGACAGTGCAAATATTTAGCAACTAAGTTAGTTCCTTTGTTTACCTTCCAATGGCACCATTTGGTTTGCGCACATTACCTGTTCTATCCAGGAGAAGACTTCTTTCTGCCTAGACTTAAGCCGAGTTTAGGCAATGCAGTGATAACGGTGATATTAGCCAGAAAGAATCGTGAGCAAATAGTGAATTTACATGATGTAG 385 1115288 0.901952578 52 361 2408 0.935587762 2.162116141 0.241545894 0.420779221 0.640901771 385 37 3 581 2L:1115224-1115474 6 190.5 77 FBgn0016926 853.46 50.28 77.25 0.223209055 3.788782816 2.466019417 5 5 5 0.01 dme-miR-965-3p 6mer2-7 ACGCTT 2L 11180036 11180041 + 2L_11180036_11180041_+ 1 1 1 0 CG4788 FBtr0080202 11179989 11180430 2L + 11180009 11180088 3'utr CG4788 FlyBase G4102.2 CGGAGGAATACTTTAGTTAAGCCAAAAACGCTTGGGTCAACTACTACAGCGACCTACCCTAAATATAGTTAATCTAGGCC 86 11180041 0.773992348 8 80 287 0.957264957 1.572096768 0.017094017 0.244186047 0.444444444 86 3 2 112 2L:11180009-11180088 6 CG4788 FBtr0080202 11179989 11180430 ACGCTT 6mer2-7 dme-miR-965-3p 2L + 11179939 11180082 stop_codon CG4788 FlyBase G3216.1 TGTCGAGTTGCGACGTACGGTGGCGCGCTTGGAGGAGAATAGTCGCCGCTAGATGACCGACTTCCCTTTGCGGAGGAATACTTTAGTTAAGCCAAAAACGCTTGGGTCAACTACTACAGCGACCTACCCTAAATATAGTTAATC 66 11180041 0.941537613 10 64 260 0.965517241 1.924279286 0.126436782 0.212121212 0.402298851 66 3 0 84 2L:11179939-11180082 6 61 78 FBgn0032354 97.66666667 9.44 14.38333333 0.624573379 6.461864407 4.241019699 -5 -5 -5 0.01 dme-miR-14-3p 7mer-m8 AAGACTG 2L 11180259 11180265 + 2L_11180259_11180265_+ 0.671795832 0.671795832 0.671795832 0 CG4788 FBtr0080202 11179989 11180430 2L + 11180237 11180278 3'utr CG4788 FlyBase G4104.1 ACATAGATGTTTTCAAACAATTAAGACTGGAAAAATACAAAA 11 11180257 0.95103807 2 10 47 1 1.146128036 0.071428571 0.090909091 0.285714286 11 0 0 14 2L:11180237-11180278 7 CG4788 FBtr0080202 11179989 11180430 AAGACTG 7mer-m8 dme-miR-14-3p 2L + 11180239 11180272 3'utr CG4788 FlyBase G3217.1 ATAGATGTTTTCAAACAATTAAGACTGGAAAAAT 9 11180257 0.808056068 3 7 55 0.8 0.903089987 0 0.111111111 0.2 9 2 0 8 2L:11180239-11180272 7 9.5 79 FBgn0032354 97.66666667 9.44 14.38333333 0.097269625 1.006355932 0.660486674 2 2 2 0.01 dme-miR-2b-2-5p 7mer-A1 TGAAGAA 2L 11227 11233 - 2L_11227_11233_- 0.823349562 0.823349562 0.823349562 0 l(2)gl FBtr0330655 9837 11309 2L - 11216 11295 stop_codon l(2)gl FlyBase G6265.1 ACAAACATTTCTCATGAAAAAACGAACGGAGACAACAAAATAGGAACGCCAAAAACAGCGCCTGAAGAAAGCCAATTTTA 12 11233 0.934810111 4 11 11 0.928571429 1.113943352 0.142857143 0.166666667 0.285714286 12 1 0 13 2L:11216-11295 7 l(2)gl FBtr0330655 9837 11309 TGAAGAA 7mer-A1 dme-miR-2b-2-5p 2L - 11217 11254 3'utr l(2)gl FlyBase G4889.1 AGGAACGCCAAAAACAGCGCCTGAAGAAAGCCAATTTT 9 11233 0.514032001 2 8 8 1 1.176091259 0 0.444444444 0.666666667 9 0 0 15 2L:11217-11254 7 8.5 80 FBgn0002121 6538.69 148.3266667 227.85 0.001299955 0.057305946 0.037305245 0 0 0 0.01 dme-miR-14-3p 8mer-A1 AAGACTGA 2L 11277478 11277485 + 2L_11277478_11277485_+ 0.643565469 0.643565469 0.643565469 0 cana FBtr0344017|FBtr0091678|FBtr0344016 11277334|11277334|11277334 11277846|11277846|11277846 2L + 11277439 11277526 intron-3'utr cana FlyBase G4113.1 AGGTGGCAATTGCCACTGCGAGCAGCGGAGCTGCAAACAAAGACTGAGTTCGGACTGGAGGCAAAACGTTGAGTTCAACGATGATAAA 54 11277493 0.945825481 7 48 189 0.916666667 1.439332694 0.316666667 0.092592593 0.183333333 54 4 1 55 2L:11277439-11277526 8 cana FBtr0344017|FBtr0091678|FBtr0344016 11277334|11277334|11277334 11277846|11277846|11277846 AAGACTGA 8mer-A1 dme-miR-14-3p 2L + 11277448 11277521 3'utr cana FlyBase G3221.1 TTGCCACTGCGAGCAGCGGAGCTGCAAACAAAGACTGAGTTCGGACTGGAGGCAAAACGTTGAGTTCAACGATG 37 11277488 0.942388917 6 32 128 0.915254237 1.130333768 0.576271186 0.378378378 0.610169492 37 2 3 54 2L:11277448-11277521 8 35.5 81 FBgn0040233 712.72 14.75333333 22.66 0.049809182 2.406235879 1.566637246 -15 -10 -12.5 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC 2L 112797 112803 + 2L_112797_112803_+ 0.661615645 0.661615645 0.661615645 0 Sam-S FBtr0330656|FBtr0089428 112780|112740 114432|114210 2L + 112764 112818 stop_codon Sam-S FlyBase G455.2 AAACGAAAAGATTGCTGAGCTGCGTCGCTCAGATGTGTTCTGGTGGGCTCGCCCC 14 112804 0.976396693 4 13 82 0.894736842 1.230448921 0.315789474 0.285714286 0.473684211 14 2 0 17 2L:112764-112818 7 Sam-S FBtr0089428|FBtr0330656 112740|112780 114210|114432 TGTGTTC 7mer-m8 dme-miR-317-3p 2L + 112723 112822 stop_codon Sam-S FlyBase G382.1 GAGGAATGTATGCCCCTAACCGTCGTTTTGGCTCACAAACTAAACGAAAAGATTGCTGAGCTGCGTCGCTCAGATGTGTTCTGGTGGGCTCGCCCCGATT 21 112804 0.980591471 8 20 141 0.95 1.579783597 0.25 0.571428571 0.775 21 2 0 38 2L:112723-112822 7 12.5 82 FBgn0005278 1886.66 102.5866667 157.21 0.006625465 0.121848193 0.079511481 -7 -7 -7 0.01 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 11281713 11281719 + 2L_11281713_11281719_+ 0.727611883 0.82333885 0.775475367 0.067689211 Ppt2 FBtr0080212 11281669 11281920 2L + 11281593 11281750 stop_codon Ppt2 FlyBase G4121.1 AAACCCCATGTTCATCATCTTGCCTGGCACACGCGAAGGGATGTCATCCACGAAGTGATATTTCCATATCTGGACTGAATAAGAAACCAAAACTACTGAACTATACTGAGCGATCAAACGGCTGTGATCGGAAAGGCGGACAAAGGCTCACTCTCATC 86 11281698 0.969928004 18 70 398 0.83 1.317018101 0.25 0.127906977 0.25 86 14 3 83 2L:11281593-11281750 7 Ppt2 FBtr0080212 11281669 11281920 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L + 11281589 11281749 stop_codon Ppt2 FlyBase G3230.1 GGTCAAACCCCATGTTCATCATCTTGCCTGGCACACGCGAAGGGATGTCATCCACGAAGTGATATTTCCATATCTGGACTGAATAAGAAACCAAAACTACTGAACTATACTGAGCGATCAAACGGCTGTGATCGGAAAGGCGGACAAAGGCTCACTCTCAT 57 11281698 0.975088893 16 45 279 0.822222222 1.392110465 0.255555556 0.368421053 0.6 57 14 2 74 2L:11281589-11281749 7 36.5 83 FBgn0032358 64.33333333 6.69 10.29333333 0.567357513 5.455904335 3.545984456 15 15 15 0.01 dme-miR-33-5p 6mer3-8 CAATGC 2L 1132056 1132061 + 2L_1132056_1132061_+ 1 1 1 0 CG4552 FBtr0077956 1131952 1132411 2L + 1132041 1132130 3'utr CG4552 FlyBase G972.1 CAGAGACACAAAGTGCAATGCGCCGCTGCGAGCGGTGTAATAGTTTGTAATTGGCATTGTTTTCCTTGTATTAGCTGAAATAGTATAGTT 34 1132059 0.973325131 10 32 237 0.95 1.278753601 0.3 0.147058824 0.275 34 1 1 38 2L:1132041-1132130 6 CG4552 FBtr0077956 1131952 1132411 CAATGC 6mer3-8 dme-miR-33-5p 2L + 1132037 1132079 3'utr CG4552 FlyBase G780.1 AAATCAGAGACACAAAGTGCAATGCGCCGCTGCGAGCGGTGTA 12 1132059 0.974488497 2 9 33 0.933333333 1.146128036 0.4 0.25 0.4 12 1 0 14 2L:1132037-1132079 6 13 84 FBgn0031304 726.5833333 32.48666667 49.62 0.01789196 0.40016417 0.261991133 -3 -3 -3 0.01 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA 2L 1132193 1132200 + 2L_1132193_1132200_+ 0.627007348 0.627007348 0.627007348 0 CG4552 FBtr0077956 1131952 1132411 2L + 1132133 1132223 3'utr CG4552 FlyBase G973.1 TATTGTAAACGAAGCGCTGGCTGCAATTGTAACATAGTGCACTCGGTGCAGAGACCGGATTTGAAGAAAATAGTCGAACGTAGTCCCAGAT 32 1132192 0.962180837 7 30 156 0.951219512 1.113943352 0.243902439 0.25 0.414634146 32 0 2 39 2L:1132133-1132223 8 CG4552 FBtr0077956 1131952 1132411 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p 2L + 1132127 1132247 3'utr CG4552 FlyBase G781.1 AGTTCTTATTGTAAACGAAGCGCTGGCTGCAATTGTAACATAGTGCACTCGGTGCAGAGACCGGATTTGAAGAAAATAGTCGAACGTAGTCCCAGATCACATGGCCATCCCGAGCATGCCA 18 1132192 0.955255859 8 16 88 0.925925926 1.397940009 0.259259259 0.444444444 0.62962963 18 2 0 25 2L:1132127-1132247 8 15 85 FBgn0031304 726.5833333 32.48666667 49.62 0.020644569 0.461727888 0.302297461 1 1 1 0.01 dme-miR-2a-2-5p 8mer-A1 TGATGAGA 2L 1132328 1132335 + 2L_1132328_1132335_+ 0.601217766 0.601217767 0.601217766 0 CG4552 FBtr0077956 1131952 1132411 2L + 1132272 1132344 3'utr CG4552 FlyBase G974.1 TTTCTAAGTGCGAATAAGGAACCCTTACCGAAGCCCTGAGACTTACAACGTGTACATGATGAGAGTAACTAAT 123 1132308 0.935610087 6 116 496 0.943262411 2.123851641 0.212765957 0.105691057 0.219858156 123 8 0 133 2L:1132272-1132344 8 CG4552 FBtr0077956 1131952 1132411 TGATGAGA 8mer-A1 dme-miR-2a-2-5p 2L + 1132281 1132334 3'utr CG4552 FlyBase G782.1 GCGAATAAGGAACCCTTACCGAAGCCCTGAGACTTACAACGTGTACATGATGAG 51 1132308 0.902792504 8 49 192 0.966666667 1.462397998 0.155555556 0.450980392 0.688888889 51 1 2 87 2L:1132281-1132334 7 21 86 FBgn0031304 726.5833333 32.48666667 49.62 0.028902397 0.646419044 0.423216445 20 20 20 0.01 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2L 113341 113346 + 2L_113341_113346_+ 1 1 1 0 Sam-S FBtr0330656|FBtr0089428 112780|112740 114432|114210 2L + 113296 113368 5'utr Sam-S FlyBase G458.2 TCTCACAAGTCACAAAAAGAACTTCTGGATATCATCCGTCGAAACTTTGACCTCAGGCCCGGCAAGATTGTCA 250 113342 0.685262887 9 243 1015 0.982698962 2.152288344 0.342560554 0.14 0.256055363 250 4 1 284 2L:113296-113368 6 Sam-S FBtr0089428|FBtr0330656 112740|112780 114210|114432 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2L + 113290 113363 5'utr Sam-S FlyBase G386.1 GGAACTTCTCACAAGTCACAAAAAGAACTTCTGGATATCATCCGTCGAAACTTTGACCTCAGGCCCGGCAAGAT 98 113342 0.935522472 5 96 369 0.992592593 2.127104798 0.318518519 0.295918367 0.488888889 98 1 0 134 2L:113290-113363 6 167 87 FBgn0005278 1886.66 102.5866667 157.21 0.088516214 1.627891864 1.062273392 -1 -1 -1 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG 2L 113734 113739 + 2L_113734_113739_+ 1 1 1 0 Sam-S FBtr0330656|FBtr0089429|FBtr0089431|FBtr0089430|FBtr0089436|FBtr0089434|FBtr0089435|FBtr0089437|FBtr0089432|FBtr0089428|FBtr0089433 112780|113541|113541|113541|113541|113541|113541|113541|113541|112740|113541 114432|114432|114432|114432|114210|114432|114432|114432|114210|114210|114432 2L + 113694 113904 3'utr Sam-S FlyBase G461.2 TAGGCTTGCCAACTCTTATGGGCTTTCTTCTCTAACTTATGCTGTGCTCTTCGCTATATAATTTAAACCATTCTGATGTGTGTAGTCTTCTCACACGGAACTAGTTTTAGTCGTCTTAATACCCGCATATATACCTAATAGAGAGCTCCAAAAGAATTGATGAGCTTTAGTTATGCATATACATAGTATAGTGTCGGTCAGTTCAGTAAAA 148 113733 0.951739125 30 141 1345 0.947674419 1.610127613 0.13372093 0.162162162 0.279069767 148 6 3 163 2L:113694-113904 6 Sam-S FBtr0089433|FBtr0089432|FBtr0089428|FBtr0089437|FBtr0089435|FBtr0089434|FBtr0089436|FBtr0089430|FBtr0089431|FBtr0089429|FBtr0330656 113541|113541|112740|113541|113541|113541|113541|113541|113541|113541|112780 114432|114210|114210|114432|114432|114432|114210|114432|114432|114432|114432 GCTGTG 6mer2-7 dme-miR-1008-3p 2L + 113675 113877 3'utr Sam-S FlyBase G387.2 GTCAGAGGAGAAGGCGGCATAGGCTTGCCAACTCTTATGGGCTTTCTTCTCTAACTTATGCTGTGCTCTTCGCTATATAATTTAAACCATTCTGATGTGTGTAGTCTTCTCACACGGAACTAGTTTTAGTCGTCTTAATACCCGCATATATACCTAATAGAGAGCTCCAAAAGAATTGATGAGCTTTAGTTATGCATATACAT 79 113733 0.939056871 21 71 694 0.896551724 1.716003344 0.137931034 0.316455696 0.534482759 79 11 1 104 2L:113675-113877 6 45 88 FBgn0005278 1886.66 102.5866667 157.21 0.023851674 0.438653496 0.286241333 1 1 1 0.01 dme-miR-92b-3p 7mer-m1 TGCAATT 2L 11508892 11508898 - 2L_11508892_11508898_- 0.765586663 0.765586663 0.765586663 0 CG6509 FBtr0336630|FBtr0080247|FBtr0080246|FBtr0336631 11508397|11508397|11508772|11508397 11511170|11509299|11509299|11509299 2L - 11508876 11508967 3'utr CG6509 FlyBase G10060.1 AATTTATATATACCGTTTGGAACTAGATTTCCTTCTCTGGCGACATTCTAAGCCAAAAGTCTGTTTGTATGCAATTTATTATTATGTAATTG 22 11508902 0.985644958 12 20 174 0.931034483 1.431363764 0.068965517 0.272727273 0.448275862 22 2 0 27 2L:11508876-11508967 7 CG6509 FBtr0080246|FBtr0336631|FBtr0336630|FBtr0080247 11508772|11508397|11508397|11508397 11509299|11509299|11511170|11509299 TGCAATT 7mer-m1 dme-miR-92b-3p 2L - 11508897 11508944 3'utr CG6509 FlyBase G7755.1 TAGATTTCCTTCTCTGGCGACATTCTAAGCCAAAAGTCTGTTTGTATG 11 11508905 0.78637229 5 11 75 1 1.204119983 0 0.454545455 0.625 11 0 0 16 2L:11508897-11508944 1 3.5 89 FBgn0032363 893.76 15.01 22.98666667 0.00391604 0.233177881 0.152262181 4 7 5.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2L 11509100 11509105 - 2L_11509100_11509105_- 1 1 1 0 CG6509 FBtr0336630|FBtr0080247|FBtr0080246|FBtr0336631 11508397|11508397|11508772|11508397 11511170|11509299|11509299|11509299 2L - 11509002 11509110 3'utr CG6509 FlyBase G10061.1 ATTTCTACCTGTTTCTTGTCTCTGTCACCTAATTAATGTCTATAGACTTACTCTTTATTTGCGGTTAGTCCGACCGCTCTGACGGCAAAATATGGTCAGCTTTAATCAC 15 11509098 0.965186762 11 15 128 1 1.278753601 0 0.266666667 0.421052632 15 0 0 19 2L:11509002-11509110 6 CG6509 FBtr0080246|FBtr0336631|FBtr0336630|FBtr0080247 11508772|11508397|11508397|11508397 11509299|11509299|11511170|11509299 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2L - 11509018 11509110 3'utr CG6509 FlyBase G7756.1 ATTTCTACCTGTTTCTTGTCTCTGTCACCTAATTAATGTCTATAGACTTACTCTTTATTTGCGGTTAGTCCGACCGCTCTGACGGCAAAATAT 14 11509096 0.988549035 5 11 120 0.8 0.903089987 0 0.357142857 0.55 14 3 1 16 2L:11509018-11509110 6 4 90 FBgn0032363 893.76 15.01 22.98666667 0.004475474 0.266489007 0.174013921 -7 -9 -8 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 2L 11509893 11509898 - 2L_11509893_11509898_- 1 1 1 0 CG6509 FBtr0336630 11508397 11511170 2L - 11509827 11509964 5'utr CG6509 FlyBase G10067.1 CACCCATTCGCCGGCCCGTGCTGATTATCGGACCGTTGTCCGAGTGTCTGATGGTTCGCCTTACAATTGACTTCTCCAACCTCTTCAAACTGTGCGAGGTGACGGCCATGGACTGTTCGCAGGAGGCCATGGAGGAGG 28 11509898 0.974689336 11 28 169 1 1.51851394 0.393939394 0.142857143 0.272727273 28 0 0 33 2L:11509827-11509964 6 CG6509 FBtr0336630 11508397 11511170 TTGACT 6mer3-8 dme-miR-1012-3p 2L - 11509838 11509964 5'utr CG6509 FlyBase G7758.1 CACCCATTCGCCGGCCCGTGCTGATTATCGGACCGTTGTCCGAGTGTCTGATGGTTCGCCTTACAATTGACTTCTCCAACCTCTTCAAACTGTGCGAGGTGACGGCCATGGACTGTTCGCAGGAGGC 16 11509898 0.949430077 9 16 100 1 1.477121255 0.433333333 0.4375 0.7 16 0 0 30 2L:11509838-11509964 6 5.5 91 FBgn0032363 893.76 15.01 22.98666667 0.006153777 0.366422385 0.239269142 0 0 0 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 11510219 11510226 - 2L_11510219_11510226_- 0.650171355 0.650171355 0.650171355 0 CG6509 FBtr0336630|FBtr0336630|FBtr0336630 11508397|11508397|11508397 11511170|11511170|11511170 2L - 11510184 11510250 5'utr CG6509 FlyBase G10068.1 ACTGCGTTCGGGTGAGGTGGTCGACTGTGATACGGGAACGGCCAGACGCGGCAGCACTTCGGCCAGA 6 11510233 0.979863718 4 4 27 0.714285714 0.698970004 0.428571429 0.166666667 0.285714286 6 2 0 5 2L:11510184-11510250 8 CG6509 FBtr0336630|FBtr0336630|FBtr0336630 11508397|11508397|11508397 11511170|11511170|11511170 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 11510210 11510245 5'utr CG6509 FlyBase G7759.1 GTTCGGGTGAGGTGGTCGACTGTGATACGGGAACGG 5 11510230 0.86229746 3 5 27 1 0.954242509 0.666666667 0.6 0.777777778 5 0 0 9 2L:11510210-11510245 8 4 92 FBgn0032363 893.76 15.01 22.98666667 0.004475474 0.266489007 0.174013921 7 4 5.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 11523071 11523077 - 2L_11523071_11523077_- 0.801970437 0.801970437 0.801970437 0 CG31705 FBtr0345719|FBtr0345719|FBtr0345719 11523019|11523019|11523019 11523549|11523549|11523549 2L - 11523054 11523094 3'utr CG31705 FlyBase G10102.1 CAGACCACTATAACATTTGTGATACAATAACAATTGGAAAA 11 11523079 0.970156949 3 11 79 1 1.041392685 0 0 0 11 0 0 11 2L:11523054-11523094 7 CG31705 FBtr0345719|FBtr0345719|FBtr0345719 11523019|11523019|11523019 11523549|11523549|11523549 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 11523064 11523093 3'utr CG31705 FlyBase G7779.1 AGACCACTATAACATTTGTGATACAATAAC 9 11523079 0.715347665 2 9 60 1 1.230448921 0 0.444444444 0.705882353 9 0 0 17 2L:11523064-11523093 7 10 93 FBgn0028490 1886.113333 87.62 132.81 0.005301908 0.114129194 0.075295535 2 2 2 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 2L 11523516 11523521 - 2L_11523516_11523521_- 1 1 1 0 CG31705 FBtr0345719|FBtr0321293|FBtr0080242 11523019|11523302|11523302 11523549|11523549|11523549 2L - 11523497 11523569 stop_codon CG31705 FlyBase G10105.1 TGGCCTACTGTCTCCACTAACGGCCCATTGCCTCCATACAATCCTTAATTGACTCAAGGACACAGTCTCGTTG 29 11523521 0.820683836 7 26 157 0.894736842 0.929418926 0.052631579 0.24137931 0.421052632 29 1 3 34 2L:11523497-11523569 6 CG31705 FBtr0080242|FBtr0321293|FBtr0345719 11523302|11523302|11523019 11523549|11523549|11523549 TTGACT 6mer3-8 dme-miR-1012-3p 2L - 11523496 11523551 stop_codon CG31705 FlyBase G7782.1 AACGGCCCATTGCCTCCATACAATCCTTAATTGACTCAAGGACACAGTCTCGTTGG 20 11523521 0.870384457 7 19 103 0.925925926 1.397940009 0 0.25 0.444444444 20 2 0 25 2L:11523496-11523551 6 21 94 FBgn0028490 1886.113333 87.62 132.81 0.011134008 0.239671308 0.158120623 0 0 0 0.01 dme-miR-14-3p 7mer-m8 AAGACTG 2L 1166384 1166390 + 2L_1166384_1166390_+ 0.671795832 0.671779106 0.671787469 1.18E-05 IntS14 FBtr0077962 1166360 1166425 2L + 1166372 1166405 3'utr IntS14 FlyBase G990.1 TGTCCTTACTTTAAGACTGTGTTTACTTTGTAAT 6 1166381 0.895502368 5 6 63 1 0.903089987 0 0.166666667 0.375 6 0 0 8 2L:1166372-1166405 7 IntS14 FBtr0077962 1166360 1166425 AAGACTG 7mer-m8 dme-miR-14-3p 2L + 1166367 1166408 3'utr IntS14 FlyBase G793.1 TTTTATGTCCTTACTTTAAGACTGTGTTTACTTTGTAATACA 7 1166391 0.987049466 4 7 78 1 1.176091259 0 0.571428571 0.8 7 0 0 15 2L:1166367-1166408 7 6.5 95 FBgn0031314 268.3333333 16.95333333 25.93333333 0.024223602 0.383405427 0.250642674 3 -7 -2 0.01 dme-miR-283-5p 7mer-m8 TGATATT 2L 117202 117208 - 2L_117202_117208_- 0.620203677 0.620203677 0.620203677 0 CG4822 FBtr0100309|FBtr0100310|FBtr0330646 117077|117172|117077 119269|119426|119201 2L - 117100 117791 lincRNA_intron-lincRNA_exon CG4822 FlyBase G6309.1 AATATATCCTGATTAGTTCACTTATACTTTAGAATGCAATGTTCATGGGGCCAGTTCTCGCCGTGCCGCTGATCCTGCTTTCCATTTACGGCATTGGGTATGGCGGAGGAACATACATATCCCCTCTTATGAGGTTTCTCATGCATCTTAGCTACCTTCGCCATAGTATGGAAGGCCTAGTCGCATCCTTGTACGACTACGGACGCGCCGACACAATTTGCGAAGACACGGAAATCTTTTGCTCATTTAAAAAGTCGAAAGTTTTGTTAGCCTTTTTAGGATTCGAAAACATGCACTATTTGTGGTCTCTATCTTGCTTGATGAGTTTTTATTTGCTGTTCACCGTAGCAGCATACTTTATGATTAGACTGCGACTGAAACACTCCGAGGTCAGCCCCATTTTTGCATATGTCATACAGCTGTTAACGAAATATTTTAACTTTACTTCGTACAATTACTAACATTAACAACATGGGCGGTTTGACCTCGGTGCTAGAAAAATTATTTTAAGCGGTATTTCAGGGGACAGTCTTAACCTCCCATATTATTTATGGGCTTCAATAATATTAATAAACTATCAAAGTGATATTGGATTCTGAATAAAAGTTTATGATCAAGAATACAAATATAATCAAGGGAACAATAAATTACTATAATTCGATCATATTGTTAACAAGGCAGAAGAAACACTA 1262 117203 0.938729087 153 1181 9042 0.936821953 2.052782703 0.128908743 0.198098257 0.354179962 1262 87 12 1468 2L:117100-117791 7 CG4822 FBtr0100310|FBtr0330646|FBtr0100309 117172|117077|117077 119426|119201|119269 TGATATT 7mer-m8 dme-miR-283-5p 2L - 117098 117754 stop_codon CG4822 FlyBase G4924.1 AATGTTCATGGGGCCAGTTCTCGCCGTGCCGCTGATCCTGCTTTCCATTTACGGCATTGGGTATGGCGGAGGAACATACATATCCCCTCTTATGAGGTTTCTCATGCATCTTAGCTACCTTCGCCATAGTATGGAAGGCCTAGTCGCATCCTTGTACGACTACGGACGCGCCGACACAATTTGCGAAGACACGGAAATCTTTTGCTCATTTAAAAAGTCGAAAGTTTTGTTAGCCTTTTTAGGATTCGAAAACATGCACTATTTGTGGTCTCTATCTTGCTTGATGAGTTTTTATTTGCTGTTCACCGTAGCAGCATACTTTATGATTAGACTGCGACTGAAACACTCCGAGGTCAGCCCCATTTTTGCATATGTCATACAGCTGTTAACGAAATATTTTAACTTTACTTCGTACAATTACTAACATTAACAACATGGGCGGTTTGACCTCGGTGCTAGAAAAATTATTTTAAGCGGTATTTCAGGGGACAGTCTTAACCTCCCATATTATTTATGGGCTTCAATAATATTAATAAACTATCAAAGTGATATTGGATTCTGAATAAAAGTTTATGATCAAGAATACAAATATAATCAAGGGAACAATAAATTACTATAATTCGATCATATTGTTAACAAGGCAGAAGAAACACTACG 863 117203 0.982810554 128 792 5976 0.926584235 1.736396502 0.14992272 0.351100811 0.567233385 863 74 21 1199 2L:117098-117754 7 235.5 96 FBgn0031220 2984.836667 134.1266667 204.7566667 0.07889879 1.755802972 1.150145701 -5 -5 -5 0.01 dme-miR-14-3p 6mer2-7 AGACTG 2L 117421 117426 - 2L_117421_117426_- 1 1 1 0 CG4822 FBtr0100309|FBtr0100310|FBtr0330646 117077|117172|117077 119269|119426|119201 2L - 117100 117791 lincRNA_intron-lincRNA_exon CG4822 FlyBase G6309.1 AATATATCCTGATTAGTTCACTTATACTTTAGAATGCAATGTTCATGGGGCCAGTTCTCGCCGTGCCGCTGATCCTGCTTTCCATTTACGGCATTGGGTATGGCGGAGGAACATACATATCCCCTCTTATGAGGTTTCTCATGCATCTTAGCTACCTTCGCCATAGTATGGAAGGCCTAGTCGCATCCTTGTACGACTACGGACGCGCCGACACAATTTGCGAAGACACGGAAATCTTTTGCTCATTTAAAAAGTCGAAAGTTTTGTTAGCCTTTTTAGGATTCGAAAACATGCACTATTTGTGGTCTCTATCTTGCTTGATGAGTTTTTATTTGCTGTTCACCGTAGCAGCATACTTTATGATTAGACTGCGACTGAAACACTCCGAGGTCAGCCCCATTTTTGCATATGTCATACAGCTGTTAACGAAATATTTTAACTTTACTTCGTACAATTACTAACATTAACAACATGGGCGGTTTGACCTCGGTGCTAGAAAAATTATTTTAAGCGGTATTTCAGGGGACAGTCTTAACCTCCCATATTATTTATGGGCTTCAATAATATTAATAAACTATCAAAGTGATATTGGATTCTGAATAAAAGTTTATGATCAAGAATACAAATATAATCAAGGGAACAATAAATTACTATAATTCGATCATATTGTTAACAAGGCAGAAGAAACACTA 1262 117425 0.938729087 153 1181 9042 0.936821953 2.052782703 0.128908743 0.198098257 0.354179962 1262 87 12 1468 2L:117100-117791 6 CG4822 FBtr0100310|FBtr0330646|FBtr0100309 117172|117077|117077 119426|119201|119269 AGACTG 6mer2-7 dme-miR-14-3p 2L - 117098 117754 stop_codon CG4822 FlyBase G4924.1 AATGTTCATGGGGCCAGTTCTCGCCGTGCCGCTGATCCTGCTTTCCATTTACGGCATTGGGTATGGCGGAGGAACATACATATCCCCTCTTATGAGGTTTCTCATGCATCTTAGCTACCTTCGCCATAGTATGGAAGGCCTAGTCGCATCCTTGTACGACTACGGACGCGCCGACACAATTTGCGAAGACACGGAAATCTTTTGCTCATTTAAAAAGTCGAAAGTTTTGTTAGCCTTTTTAGGATTCGAAAACATGCACTATTTGTGGTCTCTATCTTGCTTGATGAGTTTTTATTTGCTGTTCACCGTAGCAGCATACTTTATGATTAGACTGCGACTGAAACACTCCGAGGTCAGCCCCATTTTTGCATATGTCATACAGCTGTTAACGAAATATTTTAACTTTACTTCGTACAATTACTAACATTAACAACATGGGCGGTTTGACCTCGGTGCTAGAAAAATTATTTTAAGCGGTATTTCAGGGGACAGTCTTAACCTCCCATATTATTTATGGGCTTCAATAATATTAATAAACTATCAAAGTGATATTGGATTCTGAATAAAAGTTTATGATCAAGAATACAAATATAATCAAGGGAACAATAAATTACTATAATTCGATCATATTGTTAACAAGGCAGAAGAAACACTACG 863 117423 0.982810554 128 792 5976 0.926584235 1.736396502 0.14992272 0.351100811 0.567233385 863 74 21 1199 2L:117098-117754 6 166.5 97 FBgn0031220 2984.836667 134.1266667 204.7566667 0.055781947 1.241363885 0.813160337 -1 -3 -2 0.01 dme-miR-31a-5p 6mer3-8 TCTTGC 2L 117475 117480 - 2L_117475_117480_- 1 1 1 0 CG4822 FBtr0100309|FBtr0100310|FBtr0330646 117077|117172|117077 119269|119426|119201 2L - 117100 117791 lincRNA_intron-lincRNA_exon CG4822 FlyBase G6309.1 AATATATCCTGATTAGTTCACTTATACTTTAGAATGCAATGTTCATGGGGCCAGTTCTCGCCGTGCCGCTGATCCTGCTTTCCATTTACGGCATTGGGTATGGCGGAGGAACATACATATCCCCTCTTATGAGGTTTCTCATGCATCTTAGCTACCTTCGCCATAGTATGGAAGGCCTAGTCGCATCCTTGTACGACTACGGACGCGCCGACACAATTTGCGAAGACACGGAAATCTTTTGCTCATTTAAAAAGTCGAAAGTTTTGTTAGCCTTTTTAGGATTCGAAAACATGCACTATTTGTGGTCTCTATCTTGCTTGATGAGTTTTTATTTGCTGTTCACCGTAGCAGCATACTTTATGATTAGACTGCGACTGAAACACTCCGAGGTCAGCCCCATTTTTGCATATGTCATACAGCTGTTAACGAAATATTTTAACTTTACTTCGTACAATTACTAACATTAACAACATGGGCGGTTTGACCTCGGTGCTAGAAAAATTATTTTAAGCGGTATTTCAGGGGACAGTCTTAACCTCCCATATTATTTATGGGCTTCAATAATATTAATAAACTATCAAAGTGATATTGGATTCTGAATAAAAGTTTATGATCAAGAATACAAATATAATCAAGGGAACAATAAATTACTATAATTCGATCATATTGTTAACAAGGCAGAAGAAACACTA 1262 117491 0.938729087 153 1181 9042 0.936821953 2.052782703 0.128908743 0.198098257 0.354179962 1262 87 12 1468 2L:117100-117791 6 CG4822 FBtr0100310|FBtr0330646|FBtr0100309 117172|117077|117077 119426|119201|119269 TCTTGC 6mer3-8 dme-miR-31a-5p 2L - 117098 117754 stop_codon CG4822 FlyBase G4924.1 AATGTTCATGGGGCCAGTTCTCGCCGTGCCGCTGATCCTGCTTTCCATTTACGGCATTGGGTATGGCGGAGGAACATACATATCCCCTCTTATGAGGTTTCTCATGCATCTTAGCTACCTTCGCCATAGTATGGAAGGCCTAGTCGCATCCTTGTACGACTACGGACGCGCCGACACAATTTGCGAAGACACGGAAATCTTTTGCTCATTTAAAAAGTCGAAAGTTTTGTTAGCCTTTTTAGGATTCGAAAACATGCACTATTTGTGGTCTCTATCTTGCTTGATGAGTTTTTATTTGCTGTTCACCGTAGCAGCATACTTTATGATTAGACTGCGACTGAAACACTCCGAGGTCAGCCCCATTTTTGCATATGTCATACAGCTGTTAACGAAATATTTTAACTTTACTTCGTACAATTACTAACATTAACAACATGGGCGGTTTGACCTCGGTGCTAGAAAAATTATTTTAAGCGGTATTTCAGGGGACAGTCTTAACCTCCCATATTATTTATGGGCTTCAATAATATTAATAAACTATCAAAGTGATATTGGATTCTGAATAAAAGTTTATGATCAAGAATACAAATATAATCAAGGGAACAATAAATTACTATAATTCGATCATATTGTTAACAAGGCAGAAGAAACACTACG 863 117491 0.982810554 128 792 5976 0.926584235 1.736396502 0.14992272 0.351100811 0.567233385 863 74 21 1199 2L:117098-117754 6 167.5 98 FBgn0031220 2984.836667 134.1266667 204.7566667 0.056116973 1.248819524 0.818044183 11 11 11 0.01 dme-bantam-3p 7mer-m8 TGATCTC 2L 117839 117845 - 2L_117839_117845_- 0.661615243 0.661615243 0.661615243 0 CG4822 FBtr0100309|FBtr0100310|FBtr0330646 117077|117172|117077 119269|119426|119201 2L - 117809 118068 3'utr-intron CG4822 FlyBase G6310.1 GAAATCAATCTGTTAAAAAGGGAGTACAACAACCAGTGGTACCGTCTGAGCTCCTACTACGCAGCAATGGTTACCTCAAAGCTACCATCTATGTTTATTTTGGCCGTTATTTATCTATCCATTGTGTACTTAATGTCCAGCCAACCACTTGAATGGTTCCGCTTTGCCATGCTATTTACAATAGCTTTCGTAACGGCCCTAACTTCCGACAGTTTTGGCTTGTTGATCTCCAGTAGACTGAGCTTAGTGGTAAGCGATTT 4416 117846 0.849819808 65 4268 40796 0.967397521 2.290377115 0.186081983 0.154211957 0.287893232 4416 146 25 5074 2L:117809-118068 7 CG4822 FBtr0100310|FBtr0330646|FBtr0100309 117172|117077|117077 119426|119201|119269 TGATCTC 7mer-m8 dme-bantam-3p 2L - 117809 118076 3'utr-intron CG4822 FlyBase G4926.1 TTCCCACGGAAATCAATCTGTTAAAAAGGGAGTACAACAACCAGTGGTACCGTCTGAGCTCCTACTACGCAGCAATGGTTACCTCAAAGCTACCATCTATGTTTATTTTGGCCGTTATTTATCTATCCATTGTGTACTTAATGTCCAGCCAACCACTTGAATGGTTCCGCTTTGCCATGCTATTTACAATAGCTTTCGTAACGGCCCTAACTTCCGACAGTTTTGGCTTGTTGATCTCCAGTAGACTGAGCTTAGTGGTAAGCGATTT 2638 117846 0.83996091 58 2539 23816 0.962350547 2.072686363 0.188756042 0.354435178 0.566776902 2638 117 31 3783 2L:117809-118076 7 3173.5 99 FBgn0031220 2984.836667 134.1266667 204.7566667 1.063207255 23.6604702 15.49888486 1 1 1 0.01 dme-miR-8-3p 6mer3-8 CAGTAT 2L 11794900 11794905 - 2L_11794900_11794905_- 1 1 1 0 crol FBtr0335474|FBtr0335475|FBtr0335473|FBtr0080260 11794325|11794325|11794325|11794325 11797124|11797124|11797124|11797124 2L - 11794885 11794935 3'utr crol FlyBase G10116.1 TTTTGGATTTTTGGTGATGTGTATAGAGCGCAGTATATAGAATGCATATAG 5 11794925 0.984223369 5 5 42 1 1 0.3 0.6 0.8 5 0 0 10 2L:11794885-11794935 6 crol FBtr0335473|FBtr0080260|FBtr0335474|FBtr0335475 11794325|11794325|11794325|11794325 11797124|11797124|11797124|11797124 CAGTAT 6mer3-8 dme-miR-8-3p 2L - 11794879 11794931 3'utr crol FlyBase G7795.1 GGATTTTTGGTGATGTGTATAGAGCGCAGTATATAGAATGCATATAGAGATAT 6 11794915 0.980883097 5 6 41 1 0.954242509 0.444444444 0.333333333 0.555555556 6 0 0 9 2L:11794879-11794931 6 2.5 100 FBgn0020309 6740.04 140.5266667 216.61 0.000370918 0.017790218 0.01154148 20 10 15 0.01 dme-miR-276a-3p 6mer3-8 AGTTCC 2L 11795755 11795760 - 2L_11795755_11795760_- 0.998762438 1 0.999381219 0.000875115 crol FBtr0335474|FBtr0080262|FBtr0335475|FBtr0080263|FBtr0305262|FBtr0080261|FBtr0335473|FBtr0335476|FBtr0080260 11794325|11795170|11794325|11795170|11795170|11795494|11794325|11795167|11794325 11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124 2L - 11795620 11796051 3'utr crol FlyBase G10119.2 GCATTTTCCAAGGAGGAACATTAATAACGAGCTAACGCGCGAAAACTTTCACATATATTGGCCAAGTGTAGTCCTTAACCCAGTTTACAATATATCGAGCCCTGAAAGTGGGGCTGTGATGATTATGAGATATATATACAATTATATGACAGTGGAAACAGAAGCAGCATAACGGCAGACCCAACTAACGAGATAATGAAAAGGGATTAAACAAACAAGTTATTATATTTAATGTTAGTTGAACTACTAAAAGTAATGATTGAAAGCACGGATCGAAGGAATGGAGATAGGAGTTCCCGCGTGGGAGTGCGAGTAGTTTTTAGTTGGGCGCGTCGCCCAATCATTATGATTACAATTACAATTACGATTATGATATATGGAATACTAAACCTATAACAACAAGTTATTACCCCACTATTAAAGTTAACAAGC 149 11795731 0.954818023 61 138 840 0.93902439 1.886490725 0.286585366 0.100671141 0.182926829 149 9 1 154 2L:11795620-11796051 6 crol FBtr0305262|FBtr0335473|FBtr0080261|FBtr0335476|FBtr0080260|FBtr0335474|FBtr0080262|FBtr0335475|FBtr0080263 11795170|11794325|11795494|11795167|11794325|11794325|11795170|11794325|11795170 11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124 AGTTCC 6mer3-8 dme-miR-276a-3p 2L - 11795696 11795830 3'utr crol FlyBase G7801.1 ATTATATTTAATGTTAGTTGAACTACTAAAAGTAATGATTGAAAGCACGGATCGAAGGAATGGAGATAGGAGTTCCCGCGTGGGAGTGCGAGTAGTTTTTAGTTGGGCGCGTCGCCCAATCATTATGATTACAAT 26 11795758 0.967139632 12 24 136 0.926829268 1.579783597 0.414634146 0.423076923 0.634146341 26 3 0 38 2L:11795696-11795830 6 13 101 FBgn0020309 6740.04 140.5266667 216.61 0.001928772 0.092509132 0.060015696 -29 -2 -15.5 0.01 dme-miR-304-5p 6mer3-8 TGAGAT 2L 11795921 11795926 - 2L_11795921_11795926_- 0.948558255 1 0.974279128 0.036374775 crol FBtr0335474|FBtr0080262|FBtr0335475|FBtr0080263|FBtr0305262|FBtr0080261|FBtr0335473|FBtr0335476|FBtr0080260 11794325|11795170|11794325|11795170|11795170|11795494|11794325|11795167|11794325 11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124 2L - 11795620 11796051 3'utr crol FlyBase G10119.2 GCATTTTCCAAGGAGGAACATTAATAACGAGCTAACGCGCGAAAACTTTCACATATATTGGCCAAGTGTAGTCCTTAACCCAGTTTACAATATATCGAGCCCTGAAAGTGGGGCTGTGATGATTATGAGATATATATACAATTATATGACAGTGGAAACAGAAGCAGCATAACGGCAGACCCAACTAACGAGATAATGAAAAGGGATTAAACAAACAAGTTATTATATTTAATGTTAGTTGAACTACTAAAAGTAATGATTGAAAGCACGGATCGAAGGAATGGAGATAGGAGTTCCCGCGTGGGAGTGCGAGTAGTTTTTAGTTGGGCGCGTCGCCCAATCATTATGATTACAATTACAATTACGATTATGATATATGGAATACTAAACCTATAACAACAAGTTATTACCCCACTATTAAAGTTAACAAGC 149 11795948 0.954818023 61 138 840 0.93902439 1.886490725 0.286585366 0.100671141 0.182926829 149 9 1 154 2L:11795620-11796051 6 crol FBtr0305262|FBtr0335473|FBtr0080261|FBtr0335476|FBtr0080260|FBtr0335474|FBtr0080262|FBtr0335475|FBtr0080263 11795170|11794325|11795494|11795167|11794325|11794325|11795170|11794325|11795170 11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124 TGAGAT 6mer3-8 dme-miR-304-5p 2L - 11795863 11796056 3'utr crol FlyBase G7802.1 TTTTTGCATTTTCCAAGGAGGAACATTAATAACGAGCTAACGCGCGAAAACTTTCACATATATTGGCCAAGTGTAGTCCTTAACCCAGTTTACAATATATCGAGCCCTGAAAGTGGGGCTGTGATGATTATGAGATATATATACAATTATATGACAGTGGAAACAGAAGCAGCATAACGGCAGACCCAACTAAC 43 11795949 0.981581062 23 37 251 0.850746269 1.45484486 0.298507463 0.452380952 0.656716418 42 9 1 57 2L:11795863-11796056 6 9.5 102 FBgn0020309 6740.04 140.5266667 216.61 0.001409487 0.067602827 0.043857624 22 23 22.5 0.01 dme-miR-190-5p 6mer3-8 ACATAT 2L 11795996 11796001 - 2L_11795996_11796001_- 1 0.990859462 0.995429731 0.00646331 crol FBtr0335474|FBtr0080262|FBtr0335475|FBtr0080263|FBtr0305262|FBtr0080261|FBtr0335473|FBtr0335476|FBtr0080260 11794325|11795170|11794325|11795170|11795170|11795494|11794325|11795167|11794325 11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124 2L - 11795620 11796051 3'utr crol FlyBase G10119.2 GCATTTTCCAAGGAGGAACATTAATAACGAGCTAACGCGCGAAAACTTTCACATATATTGGCCAAGTGTAGTCCTTAACCCAGTTTACAATATATCGAGCCCTGAAAGTGGGGCTGTGATGATTATGAGATATATATACAATTATATGACAGTGGAAACAGAAGCAGCATAACGGCAGACCCAACTAACGAGATAATGAAAAGGGATTAAACAAACAAGTTATTATATTTAATGTTAGTTGAACTACTAAAAGTAATGATTGAAAGCACGGATCGAAGGAATGGAGATAGGAGTTCCCGCGTGGGAGTGCGAGTAGTTTTTAGTTGGGCGCGTCGCCCAATCATTATGATTACAATTACAATTACGATTATGATATATGGAATACTAAACCTATAACAACAAGTTATTACCCCACTATTAAAGTTAACAAGC 149 11796004 0.954818023 61 138 840 0.93902439 1.886490725 0.286585366 0.100671141 0.182926829 149 9 1 154 2L:11795620-11796051 6 crol FBtr0305262|FBtr0335473|FBtr0080261|FBtr0335476|FBtr0080260|FBtr0335474|FBtr0080262|FBtr0335475|FBtr0080263 11795170|11794325|11795494|11795167|11794325|11794325|11795170|11794325|11795170 11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124 ACATAT 6mer3-8 dme-miR-190-5p 2L - 11795863 11796056 3'utr crol FlyBase G7802.1 TTTTTGCATTTTCCAAGGAGGAACATTAATAACGAGCTAACGCGCGAAAACTTTCACATATATTGGCCAAGTGTAGTCCTTAACCCAGTTTACAATATATCGAGCCCTGAAAGTGGGGCTGTGATGATTATGAGATATATATACAATTATATGACAGTGGAAACAGAAGCAGCATAACGGCAGACCCAACTAAC 43 11795985 0.981581062 23 37 251 0.850746269 1.45484486 0.298507463 0.452380952 0.656716418 42 9 1 57 2L:11795863-11796056 6 14.5 103 FBgn0020309 6740.04 140.5266667 216.61 0.002151323 0.103183263 0.066940584 3 -16 -6.5 0.01 dme-miR-92b-3p 8mer-A1 GTGCAATA 2L 11796543 11796550 - 2L_11796543_11796550_- 0.628916032 0.628916032 0.628916032 0 crol FBtr0335474|FBtr0080262|FBtr0335475|FBtr0080263|FBtr0305262|FBtr0080261|FBtr0335473|FBtr0335476|FBtr0080260 11794325|11795170|11794325|11795170|11795170|11795494|11794325|11795167|11794325 11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124 2L - 11796146 11796593 3'utr crol FlyBase G10120.1 AAATTAAACACTCCTCAATTAGTCTGCCGCCGCCAGCTTTAACGTGCAATACGAATCATCTCATAGTTTGTTCTTGGTATCTCTCCCTTTTATGTGTATCTTTAATGCTTAGGCGCTTAGCGTCTAATTTTATTCACGTGTTTTCTACATTTTTGAAATGTGTGCCAGGCGGCGCGTGACTTTGTTTGGGTCGATCGATATGGTTTTTGTGATATCCGATTGTTCCTTAGCTGCGCTCAGTGAATCAAATGGATCCGAAGACCAATCCGTCTCAGGCAATTTTCTCGCTAGACACTTAAAGTTAAGGGGTTTTTGTTGCCGTAACCAGCAGAAGCGCACCATCTTGTATTTTTATTGTGTTTTGACTAAGTTATGATTATATCCATATGGAGCGACATTCATAGAAAGCATCCTCATCATACATAAACATATGCAGATATGCATAGGC 299 11796521 0.858632965 74 284 2847 0.953678474 1.765916794 0.307901907 0.190635452 0.340599455 299 12 5 350 2L:11796146-11796593 8 crol FBtr0305262|FBtr0335473|FBtr0080261|FBtr0335476|FBtr0080260|FBtr0335474|FBtr0080262|FBtr0335475|FBtr0080263 11795170|11794325|11795494|11795167|11794325|11794325|11795170|11794325|11795170 11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124 GTGCAATA 8mer-A1 dme-miR-92b-3p 2L - 11796468 11796638 3'utr crol FlyBase G7805.1 AAATCACCCTGGAAACTCAACGAGATATGTGTCCCAATCGCAAGCAAATTAAACACTCCTCAATTAGTCTGCCGCCGCCAGCTTTAACGTGCAATACGAATCATCTCATAGTTTGTTCTTGGTATCTCTCCCTTTTATGTGTATCTTTAATGCTTAGGCGCTTAGCGTCTA 141 11796521 0.971161985 27 136 1410 0.970149254 1.68797462 0.308457711 0.333333333 0.532338308 141 3 3 195 2L:11796468-11796638 8 21.5 104 FBgn0020309 6740.04 140.5266667 216.61 0.003189892 0.152995873 0.099256729 -29 -29 -29 0.01 dme-miR-980-3p 7mer-A1 GCAGCTA 2L 11796912 11796918 - 2L_11796912_11796918_- 0.823349562 0.823349562 0.823349562 0 crol FBtr0335474|FBtr0080262|FBtr0335475|FBtr0080263|FBtr0305262|FBtr0080261|FBtr0335473|FBtr0335476|FBtr0080260 11794325|11795170|11794325|11795170|11795170|11795494|11794325|11795167|11794325 11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124 2L - 11796907 11797013 3'utr crol FlyBase G10122.2 AGGCATGCGTGCCACCAGTGAGCCAGTGCTAGTGAGCCGAGCTGACGCGACTTCTCTAGATAGGACACACATCATAACAAGCGCACCCCATATAAGCAGCTAGTTGT 119 11796921 0.855509757 14 115 513 0.964285714 1.528273777 0.3 0.176470588 0.3 119 2 3 135 2L:11796907-11797013 7 crol FBtr0305262|FBtr0335473|FBtr0080261|FBtr0335476|FBtr0080260|FBtr0335474|FBtr0080262|FBtr0335475|FBtr0080263 11795170|11794325|11795494|11795167|11794325|11794325|11795170|11794325|11795170 11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124 GCAGCTA 7mer-A1 dme-miR-980-3p 2L - 11796821 11797006 3'utr crol FlyBase G7807.1 CGTGCCACCAGTGAGCCAGTGCTAGTGAGCCGAGCTGACGCGACTTCTCTAGATAGGACACACATCATAACAAGCGCACCCCATATAAGCAGCTAGTTGTATGTACAATAGTTTTAGCAGCGCGCTGGTTACGCTGATCGGTGGCCCCAAGCGGATATCGTGATACGCTGGGTTTCTAGGGTGTGT 126 11796921 0.844030463 28 112 658 0.880208333 1.324796718 0.276041667 0.365079365 0.583333333 126 16 7 169 2L:11796821-11797006 7 30 105 FBgn0020309 6740.04 140.5266667 216.61 0.004451012 0.213482613 0.138497761 3 3 3 0.01 dme-miR-318-3p 6mer2-7 CCAGTG 2L 11796986 11796991 - 2L_11796986_11796991_- 1 1 1 0 crol FBtr0335474|FBtr0080262|FBtr0335475|FBtr0080263|FBtr0305262|FBtr0080261|FBtr0335473|FBtr0335476|FBtr0080260 11794325|11795170|11794325|11795170|11795170|11795494|11794325|11795167|11794325 11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124 2L - 11796907 11797013 3'utr crol FlyBase G10122.2 AGGCATGCGTGCCACCAGTGAGCCAGTGCTAGTGAGCCGAGCTGACGCGACTTCTCTAGATAGGACACACATCATAACAAGCGCACCCCATATAAGCAGCTAGTTGT 119 11796962 0.855509757 14 115 513 0.964285714 1.528273777 0.3 0.176470588 0.3 119 2 3 135 2L:11796907-11797013 6 crol FBtr0305262|FBtr0335473|FBtr0080261|FBtr0335476|FBtr0080260|FBtr0335474|FBtr0080262|FBtr0335475|FBtr0080263 11795170|11794325|11795494|11795167|11794325|11794325|11795170|11794325|11795170 11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124 CCAGTG 6mer2-7 dme-miR-318-3p 2L - 11796821 11797006 3'utr crol FlyBase G7807.1 CGTGCCACCAGTGAGCCAGTGCTAGTGAGCCGAGCTGACGCGACTTCTCTAGATAGGACACACATCATAACAAGCGCACCCCATATAAGCAGCTAGTTGTATGTACAATAGTTTTAGCAGCGCGCTGGTTACGCTGATCGGTGGCCCCAAGCGGATATCGTGATACGCTGGGTTTCTAGGGTGTGT 126 11796971 0.844030463 28 112 658 0.880208333 1.324796718 0.276041667 0.365079365 0.583333333 126 16 7 169 2L:11796821-11797006 6 13.5 106 FBgn0020309 6740.04 140.5266667 216.61 0.002002955 0.096067176 0.062323992 -29 -20 -24.5 0.01 dme-miR-1003-3p 6mer2-7 TGTGAG 2L 11810188 11810193 - 2L_11810188_11810193_- 1 1 1 0 CycY FBtr0333425 11810090 11811116 2L - 11810141 11810240 3'utr CycY FlyBase G10150.1 CGAGCGAGAGTTGCAAGGAGCACAGCGCAATATTAACCCAAAAGATTTGTGAGTAAATTAATGTACTAGACATATAAGGATACGAATTATATGCAAAATG 49 11810194 0.971613355 7 49 282 1 1.72427587 0.056603774 0.081632653 0.150943396 49 0 0 53 2L:11810141-11810240 6 CycY FBtr0333425 11810090 11811116 TGTGAG 6mer2-7 dme-miR-1003-3p 2L - 11810179 11810224 3'utr CycY FlyBase G7828.1 GGAGCACAGCGCAATATTAACCCAAAAGATTTGTGAGTAAATTAAT 23 11810194 0.967355399 4 22 119 0.948717949 1.568201724 0.128205128 0.47826087 0.692307692 23 2 0 37 2L:11810179-11810224 6 31.5 107 FBgn0032378 829.4 43.03666667 66.07 0.037979262 0.73193401 0.476767065 1 1 1 0.01 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 11810369 11810376 - 2L_11810369_11810376_- 0.625364009 0.625364009 0.625364009 0 CycY FBtr0333425 11810090 11811116 2L - 11810365 11810420 3'utr CycY FlyBase G10151.1 AATAACTCAATATGATTTCGTGTGATTCTTATATAGTTTCCATTTAGCTTTATATA 20 11810377 0.820306031 5 20 206 1 1.380211242 0.083333333 0.15 0.291666667 20 0 0 24 2L:11810365-11810420 8 CycY FBtr0333425 11810090 11811116 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 11810365 11810420 3'utr CycY FlyBase G7830.1 AATAACTCAATATGATTTCGTGTGATTCTTATATAGTTTCCATTTAGCTTTATATA 25 11810377 0.779495814 6 25 256 1 1.491361694 0.064516129 0.2 0.35483871 25 0 0 31 2L:11810365-11810420 8 14 108 FBgn0032378 829.4 43.03666667 66.07 0.016879672 0.325304004 0.211896473 1 1 1 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 2L 11811104 11811109 - 2L_11811104_11811109_- 0.999999992 1 0.999999996 0 CycY FBtr0080259|FBtr0333425 11810495|11810090 11811116|11811116 2L - 11811046 11811152 stop_codon CycY FlyBase G10154.1 GGCGGGCCGCGACGCAGCGTGGCCATACTATCGTGATTTATATTAGCTTACTAAAACCGAACAACCAACCAACAGCAGCAATGAGATCCGTACTCTGTAGTCCGTAG 66 11811115 0.999437249 6 63 604 0.96 1.556302501 0.24 0.090909091 0.2 66 2 1 72 2L:11811046-11811152 6 CycY FBtr0080259|FBtr0333425 11810495|11810090 11811116|11811116 TAGCTT 6mer3-8 dme-miR-79-3p 2L - 11811097 11811140 stop_codon CycY FlyBase G7833.1 CGCAGCGTGGCCATACTATCGTGATTTATATTAGCTTACTAAAA 44 11811115 0.661512762 7 44 413 1 1.832508913 0.294117647 0.386363636 0.602941176 44 0 0 68 2L:11811097-11811140 6 31 109 FBgn0032378 829.4 43.03666667 66.07 0.037376417 0.72031601 0.469199334 6 6 6 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 118176 118182 - 2L_118176_118182_- 0.801970437 0.801970437 0.801970437 0 CG4822 FBtr0100309|FBtr0100309|FBtr0100309|FBtr0100310|FBtr0100310|FBtr0100310|FBtr0330646|FBtr0330646|FBtr0330646 117077|117077|117077|117172|117172|117172|117077|117077|117077 119269|119269|119269|119426|119426|119426|119201|119201|119201 2L - 118136 118303 3'utr CG4822 FlyBase G6311.1 CGTACATCAAGCTTAAGTTCTACATGAACATCGTTCTTGCTTTACTGGTGGGTTCGCTCTACTTTGGTATGGGAACCTCGGCCTCTAAAGCGCTTTTTAACTTCGGTTTCATGTTCACCATTGTGATAGCATACCTCTACCTTCCTATGATGCCTGTGCTCTTATATT 677 118183 0.799572564 41 607 5604 0.90295858 1.174954362 0.146745562 0.209748892 0.366863905 677 32 50 763 2L:118136-118303 7 CG4822 FBtr0100310|FBtr0100310|FBtr0100310|FBtr0330646|FBtr0330646|FBtr0330646|FBtr0100309|FBtr0100309|FBtr0100309 117172|117172|117172|117077|117077|117077|117077|117077|117077 119426|119426|119426|119201|119201|119201|119269|119269|119269 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 118136 118245 3'utr CG4822 FlyBase G4927.1 CTACTTTGGTATGGGAACCTCGGCCTCTAAAGCGCTTTTTAACTTCGGTTTCATGTTCACCATTGTGATAGCATACCTCTACCTTCCTATGATGCCTGTGCTCTTATATT 400 118183 0.793520742 26 359 3210 0.904040404 1.252853031 0.131313131 0.3625 0.570707071 400 28 29 537 2L:118136-118245 7 441 110 FBgn0031220 2984.836667 134.1266667 204.7566667 0.147746778 3.287936776 2.153776027 1 1 1 0.01 dme-miR-282-5p 6mer2-7 GAGGCT 2L 1181768 1181773 + 2L_1181768_1181773_+ 1 1 1 0 CG4896 FBtr0335394|FBtr0335395|FBtr0308698 1179902|1179230|1179230 1182454|1182454|1182454 2L + 1181722 1181790 3'utr CG4896 FlyBase G1010.1 TCTACACAAGGAGAATCTGGACAAGCTTAAACGGAATCCCGCAGTTGAGGCTGGCACGGATGAGGGTCT 51 1181767 0.918268572 5 49 173 0.966101695 1.45484486 0.372881356 0.098039216 0.220338983 51 1 1 57 2L:1181722-1181790 6 CG4896 FBtr0308698|FBtr0335394|FBtr0335395 1179230|1179902|1179230 1182454|1182454|1182454 GAGGCT 6mer2-7 dme-miR-282-5p 2L + 1181727 1181791 3'utr CG4896 FlyBase G804.1 ACAAGGAGAATCTGGACAAGCTTAAACGGAATCCCGCAGTTGAGGCTGGCACGGATGAGGGTCTA 33 1181739 0.842965586 4 32 111 0.955555556 1.633468456 0.288888889 0.242424242 0.444444444 33 2 0 43 2L:1181727-1181791 6 25.5 111 FBgn0031319 314.3566667 11.06666667 17.08 0.081118051 2.304216867 1.492974239 1 29 15 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2L 1181949 1181954 + 2L_1181949_1181954_+ 1 1 1 0 CG4896 FBtr0335394|FBtr0335395|FBtr0308698 1179902|1179230|1179230 1182454|1182454|1182454 2L + 1181872 1182078 3'utr CG4896 FlyBase G1011.1 AGGAACGCAGGCTGAAGTACGGTGAGAGCGATCCTCCTCCACCAAATAGGAGCCGGGAGCGTTTCGAGCAAGAGATAAAGACTTTGCAGTCGCGCCAGAAGGATTCTTTTGGCGCCACTGCAGCCATGCCCATCAGTTCGACCAACGTGGGCAGCCGCCTGATGCAGAAGATGGGCTGGTCGGAGGGCCAGGGACTGGGCAAAAAGA 461 1181956 0.949576558 19 438 1900 0.952198853 1.998259338 0.544933078 0.114967462 0.219885277 461 21 4 498 2L:1181872-1182078 6 CG4896 FBtr0308698|FBtr0335394|FBtr0335395 1179230|1179902|1179230 1182454|1182454|1182454 AAGACT 6mer3-8 dme-miR-14-3p 2L + 1181862 1182074 3'utr CG4896 FlyBase G805.1 GATCGTGCCAAGGAACGCAGGCTGAAGTACGGTGAGAGCGATCCTCCTCCACCAAATAGGAGCCGGGAGCGTTTCGAGCAAGAGATAAAGACTTTGCAGTCGCGCCAGAAGGATTCTTTTGGCGCCACTGCAGCCATGCCCATCAGTTCGACCAACGTGGGCAGCCGCCTGATGCAGAAGATGGGCTGGTCGGAGGGCCAGGGACTGGGCAAA 333 1181956 0.8896486 20 327 1379 0.979338843 2.374748346 0.516528926 0.345345345 0.549586777 333 9 1 474 2L:1181862-1182074 6 350 112 FBgn0031319 314.3566667 11.06666667 17.08 1.113385009 31.62650602 20.49180328 -7 -7 -7 0.01 dme-miR-277-3p 7mer-A1 GCATTTA 2L 1182331 1182337 + 2L_1182331_1182337_+ 0.823349429 0.823349562 0.823349495 1.41E-07 CG4896 FBtr0335394|FBtr0335395|FBtr0308698 1179902|1179230|1179230 1182454|1182454|1182454 2L + 1182267 1182344 stop_codon CG4896 FlyBase G1013.1 AGCGTTATGAGAACGCCTGAGACTCTTCTTAAAGTGTATGATTTTATTCCGCTTGAATATAGGGGCATTTAAGCATTG 17 1182313 0.98025318 6 16 112 0.947368421 1.255272505 0.105263158 0.117647059 0.210526316 17 1 0 18 2L:1182267-1182344 7 CG4896 FBtr0344790|FBtr0308698|FBtr0335394|FBtr0335395|FBtr0077968 1182285|1179230|1179902|1179230|1182285 1182454|1182454|1182454|1182454|1182454 GCATTTA 7mer-A1 dme-miR-277-3p 2L + 1182304 1182341 3'utr CG4896 FlyBase G807.1 ATGATTTTATTCCGCTTGAATATAGGGGCATTTAAGCA 9 1182319 0.983252631 4 7 57 1 1.079181246 0.083333333 0.222222222 0.416666667 9 0 0 12 2L:1182304-1182341 7 5.5 113 FBgn0031319 314.3566667 11.06666667 17.08 0.01749605 0.496987952 0.322014052 18 12 15 0.01 dme-miR-276a-3p 8mer-A1 AGTTCCTA 2L 11827385 11827392 - 2L_11827385_11827392_- 0.637906983 0.637906983 0.637906983 0 esc FBtr0080325 11827202 11827459 2L - 11827335 11827448 5'utr esc FlyBase G10163.1 GGCGCAACCACAAACCAAATCTCACGTGGCCAAAACTTACAACATTTCCCTCAATTAGTTCCTAGTTGGTTAGCATTAAGATATAGAATTACGCTCCTGTGCTGTTCCAAATTA 83 11827403 0.988596207 15 76 710 0.911111111 1.612783857 0.044444444 0.084337349 0.155555556 83 7 1 82 2L:11827335-11827448 8 esc FBtr0080325 11827202 11827459 AGTTCCTA 8mer-A1 dme-miR-276a-3p 2L - 11827336 11827422 5'utr esc FlyBase G7840.1 TGGCCAAAACTTACAACATTTCCCTCAATTAGTTCCTAGTTGGTTAGCATTAAGATATAGAATTACGCTCCTGTGCTGTTCCAAATT 49 11827403 0.769280404 7 42 388 0.869565217 1.477121255 0.043478261 0.326530612 0.52173913 49 8 1 60 2L:11827336-11827422 8 34 114 FBgn0000588 215.62 15.44 23.56 0.157684816 2.202072539 1.443123939 11 11 11 0.01 dme-miR-304-5p 7mer-A1 GAGATTA 2L 118450 118456 - 2L_118450_118456_- 0.823349562 0.823349562 0.823349562 0 CG4822 FBtr0100309|FBtr0100310|FBtr0330646 117077|117172|117077 119269|119426|119201 2L - 118363 118476 3'utr CG4822 FlyBase G6312.1 AAAGGGATCAGTTTGACGAAGAGATTAGCCCAAAACTTTTGGAGGCCAAATGTAGCTGGTGGCTACAGTACAAGCTATTGCTTGTGCGTATGCTAATCCAAATGTGGAGAGATA 77 118437 0.84617316 16 75 432 0.978021978 1.949390007 0.087912088 0.155844156 0.285714286 77 2 0 89 2L:118363-118476 7 CG4822 FBtr0100310|FBtr0330646|FBtr0100309 117172|117077|117077 119426|119201|119269 GAGATTA 7mer-A1 dme-miR-304-5p 2L - 118361 118471 3'utr CG4822 FlyBase G4929.1 GATCAGTTTGACGAAGAGATTAGCCCAAAACTTTTGGAGGCCAAATGTAGCTGGTGGCTACAGTACAAGCTATTGCTTGTGCGTATGCTAATCCAAATGTGGAGAGATAAG 45 118427 0.855381981 14 44 227 0.971428571 1.832508913 0.171428571 0.422222222 0.628571429 45 2 0 68 2L:118361-118471 7 18.5 115 FBgn0031220 2984.836667 134.1266667 204.7566667 0.006197994 0.137929321 0.090351149 -19 -29 -24 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 118798 118803 - 2L_118798_118803_- 1 1 1 0 CG4822 FBtr0100309|FBtr0100310|FBtr0330646 117077|117172|117077 119269|119426|119201 2L - 118514 118873 3'utr CG4822 FlyBase G6313.1 GGTTTAGACGATTTATCGAGTTCACAATGCATTGCCCTACTCAAAGTTTTGGCCGCCGGGGGGCGCACTGTGATCTGCTCCATCCATACGCCATCTGCCAAGATCTTCGAGATGCTCGATGCAGTCTACGTTCTAGCCGAAGGCCAGTGCGTCTACCAAGGAAAGGGGTCCAACATTGTACCTTTCTTGAAGAACTTTGGGCTTTGTTGTCCAATAACCTACAACCCGGCTGACTTCATTATCGAAGTTGCTTGCCTTGAGTATGGCGGGTCCTATCACGAGCCAATGGTAGAAGCCGTGGGCAACGGCAAAGTTGCGCGATGGAGTCCTCCAGCAGTGGAAGGTGAAACAACAACAACC 356 118798 0.969903548 64 339 2197 0.956416465 1.897627091 0.341404358 0.137640449 0.256658596 356 14 4 395 2L:118514-118873 6 CG4822 FBtr0100310|FBtr0330646|FBtr0100309 117172|117077|117077 119426|119201|119269 TGATCT 6mer3-8 dme-bantam-3p 2L - 118491 118868 3'utr CG4822 FlyBase G4930.1 AGACGATTTATCGAGTTCACAATGCATTGCCCTACTCAAAGTTTTGGCCGCCGGGGGGCGCACTGTGATCTGCTCCATCCATACGCCATCTGCCAAGATCTTCGAGATGCTCGATGCAGTCTACGTTCTAGCCGAAGGCCAGTGCGTCTACCAAGGAAAGGGGTCCAACATTGTACCTTTCTTGAAGAACTTTGGGCTTTGTTGTCCAATAACCTACAACCCGGCTGACTTCATTATCGAAGTTGCTTGCCTTGAGTATGGCGGGTCCTATCACGAGCCAATGGTAGAAGCCGTGGGCAACGGCAAAGTTGCGCGATGGAGTCCTCCAGCAGTGGAAGGTGAAACAACAACAACCAAAACCGACACCACATCGGGGGC 243 118798 0.975629668 54 233 1471 0.948275862 2.51851394 0.353448276 0.341563786 0.540229885 243 18 0 330 2L:118491-118868 6 110.5 116 FBgn0031220 2984.836667 134.1266667 204.7566667 0.037020451 0.823848104 0.539664968 -5 -5 -5 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 2L 119231 119237 - 2L_119231_119237_- 0.823349562 0.823349562 0.823349562 0 CG4822 FBtr0100309 117077 119269 2L - 119140 119282 lincRNA_intron-lincRNA_exon CG4822 FlyBase G6315.1 AGTGGATTACTGAATTGCGTTCCCATAAATATTGGTGTAATTCATAGACTGATGTCCTGGACTCACAGTTTACCGTACTAGAAATGATGATTTTGGCGGCAAACTTGAAGTTGGGAAAAGAACTAAATTTAAAACAAAAGCTA 189 119238 0.984613655 23 179 1440 0.947136564 1.48734042 0.348017621 0.169312169 0.308370044 189 6 6 215 2L:119140-119282 7 CG4822 FBtr0100309 117077 119269 AGACTGA 7mer-A1 dme-miR-14-3p 2L - 119140 119255 3'utr CG4822 FlyBase G4932.1 AATATTGGTGTAATTCATAGACTGATGTCCTGGACTCACAGTTTACCGTACTAGAAATGATGATTTTGGCGGCAAACTTGAAGTTGGGAAAAGAACTAAATTTAAAACAAAAGCTA 131 119238 0.921793217 20 123 950 0.921658986 1.397940009 0.313364055 0.419847328 0.649769585 131 10 7 200 2L:119140-119255 7 114.5 117 FBgn0031220 2984.836667 134.1266667 204.7566667 0.038360558 0.85367066 0.559200352 1 1 1 0.01 dme-miR-988-3p 6mer3-8 ACAAGG 2L 11984883 11984888 - 2L_11984883_11984888_- 1 1 1 0 CG6686 FBtr0301171 11984325 11987330 2L - 11984876 11984920 5'utr CG6686 FlyBase G10171.1 CTTCCACTTTGGACCGATTACAGACTTTAAGGACAAGGAGACCTT 29 11984893 0.967807585 3 27 153 0.9375 1 0.15625 0.142857143 0.25 28 0 2 30 2L:11984876-11984920 6 CG6686 FBtr0301171 11984325 11987330 ACAAGG 6mer3-8 dme-miR-988-3p 2L - 11984869 11984918 5'utr CG6686 FlyBase G7849.1 TCCACTTTGGACCGATTACAGACTTTAAGGACAAGGAGACCTTCAAGCCC 12 11984893 0.973133183 3 11 62 0.941176471 0.903089987 0.058823529 0.416666667 0.588235294 12 0 1 16 2L:11984869-11984918 6 14.5 118 FBgn0032388 1118.523333 42.80333333 65.72 0.01296352 0.338758664 0.220632988 5 5 5 0.01 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2L 11985312 11985317 - 2L_11985312_11985317_- 1 1 1 0 CG6686 FBtr0301171 11984325 11987330 2L - 11985309 11985357 5'utr CG6686 FlyBase G10173.1 GGCGGGCAACCGTAATGAGGACTCCAATGACATGATGGACTTTGACAAG 17 11985322 0.960565574 4 17 85 1 1.322219295 0.19047619 0.176470588 0.333333333 17 0 0 21 2L:11985309-11985357 6 CG6686 FBtr0301171 11984325 11987330 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2L - 11985256 11985341 5'utr CG6686 FlyBase G7850.1 GAGGACTCCAATGACATGATGGACTTTGACAAGACCGAACAGCCGGAGGAGCATATGGAAACACATACCGATGAGCCTGCCCTGAG 22 11985322 0.961757567 5 21 104 0.971428571 1.531478917 0.2 0.363636364 0.6 22 1 0 34 2L:11985256-11985341 6 16.5 119 FBgn0032388 1118.523333 42.80333333 65.72 0.014751592 0.385483997 0.251065125 5 5 5 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2L 11985976 11985982 - 2L_11985976_11985982_- 0.521223855 0.521223855 0.521223855 0 CG6686 FBtr0301171 11984325 11987330 2L - 11985857 11986018 5'utr CG6686 FlyBase G10176.1 TGAAATGGAAGGTCAGCCGAAAAAGCGCAAGAACTTTGTGATTGGTGAGAATATGGATGAGGAGCGGGAGCACAGACGCAAGCTCCTGGAGATTAAGACCAAATTAGCCGGCAAGCGTTTGGAAACCTTGGAGGACACCAATCTGCAGCTAGCATCGGACAC 302 11985976 0.765601636 18 295 1655 0.979591837 2.049218023 0.131195335 0.11589404 0.221574344 302 5 2 336 2L:11985857-11986018 7 CG6686 FBtr0301171 11984325 11987330 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 11985896 11986011 5'utr CG6686 FlyBase G7852.1 GAAGGTCAGCCGAAAAAGCGCAAGAACTTTGTGATTGGTGAGAATATGGATGAGGAGCGGGAGCACAGACGCAAGCTCCTGGAGATTAAGACCAAATTAGCCGGCAAGCGTTTGGA 181 11985976 0.969730041 13 178 1007 0.988847584 2.123851641 0.130111524 0.342541436 0.557620818 181 2 1 266 2L:11985896-11986011 7 183 120 FBgn0032388 1118.523333 42.80333333 65.72 0.163608567 4.275367962 2.784540475 -6 -6 -6 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 2L 11986197 11986202 - 2L_11986197_11986202_- 1 1 1 0 CG6686 FBtr0301171 11984325 11987330 2L - 11986098 11986222 5'utr CG6686 FlyBase G10177.1 TCTAACTCTTAAGGATCAAGATGTGCTTAACGAGGAGGAAGGCGACACTCTAGTCAATGTTAACATGGTCGACGAAGAGCGCTATAAGAAGAATGTGGCCAACAAGAAGCAGAATCCGCTCAGTT 52 11986174 0.971986572 12 43 254 0.826086957 1.278753601 0.217391304 0.25 0.434782609 52 10 2 57 2L:11986098-11986222 6 CG6686 FBtr0301171 11984325 11987330 ATGTGC 6mer3-8 dme-miR-305-3p 2L - 11986120 11986222 5'utr CG6686 FlyBase G7853.1 TCTAACTCTTAAGGATCAAGATGTGCTTAACGAGGAGGAAGGCGACACTCTAGTCAATGTTAACATGGTCGACGAAGAGCGCTATAAGAAGAATGTGGCCAAC 32 11986196 0.984003151 9 22 164 0.723404255 1.054357662 0.170212766 0.3125 0.531914894 32 11 2 34 2L:11986120-11986222 6 16 121 FBgn0032388 1118.523333 42.80333333 65.72 0.014304574 0.373802663 0.243457091 -28 -6 -17 0.01 dme-miR-988-3p 6mer3-8 ACAAGG 2L 11987298 11987303 - 2L_11987298_11987303_- 1 0.999966113 0.999983057 2.40E-05 CG6686 FBtr0301171 11984325 11987330 2L - 11987273 11987307 5'utr CG6686 FlyBase G10180.1 CGTGACAAGGAGCGGGATTCTGGACGCGATCGTGA 6 11987289 0.891892238 3 6 19 1 0.77815125 0.333333333 0 0 6 0 0 6 2L:11987273-11987307 6 CG6686 FBtr0301171 11984325 11987330 ACAAGG 6mer3-8 dme-miR-988-3p 2L - 11987267 11987347 stop_codon CG6686 FlyBase G7855.1 GGCGCAGGCCAAGTTGAGGGACGCCAGAGAATCGTCCAATCGTGACAAGGAGCGGGATTCTGGACGCGATCGTGAACTCCT 7 11987288 0.848751911 4 7 19 1 1 0.9 0.428571429 0.6 7 0 0 10 2L:11987267-11987347 6 4.5 122 FBgn0032388 1118.523333 42.80333333 65.72 0.004023161 0.105131999 0.068472307 -14 -15 -14.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 11988947 11988952 - 2L_11988947_11988952_- 0.948675547 1 0.974337773 0.036291902 zuc FBtr0080316 11988733 11989062 2L - 11988928 11988978 3'utr zuc FlyBase G10182.1 TTAAACTAAAACTTTTTAAGGCAGCTTGATCTTCACACACAAAGGAGTGCC 41 11988953 0.970892376 5 41 240 1 1.716003344 0.057692308 0.195121951 0.365384615 41 0 0 52 2L:11988928-11988978 6 zuc FBtr0080316 11988733 11989062 TGATCT 6mer3-8 dme-bantam-3p 2L - 11988932 11988973 3'utr zuc FlyBase G7858.1 CTAAAACTTTTTAAGGCAGCTTGATCTTCACACACAAAGGAG 26 11988952 0.963710235 5 25 158 0.975609756 1.301029996 0 0.384615385 0.609756098 26 0 1 40 2L:11988932-11988973 6 33.5 123 FBgn0261266 108.3366667 11.63 17.8 0.309221255 2.880481513 1.882022472 1 0 0.5 0.01 dme-miR-1006-3p 6mer2-7 GAATTT 2L 11996408 11996413 + 2L_11996408_11996413_+ 1 1 1 0 Qtzl FBtr0080288|FBtr0339524 11996242|11996242 11996469|11996723 2L + 11996377 11996451 3'utr Qtzl FlyBase G4156.1 GTCAATTAGGATGAGTGTTTCTAGGCTAAAAGAATTTTCCTTATCCTTCTAAATCCGATACCATATTTATGTAAC 15 11996430 0.956330228 11 14 152 0.882352941 1.176091259 0.058823529 0.133333333 0.235294118 15 2 0 15 2L:11996377-11996451 6 Qtzl FBtr0080288|FBtr0339524 11996242|11996242 11996469|11996723 GAATTT 6mer2-7 dme-miR-1006-3p 2L + 11996382 11996446 3'utr Qtzl FlyBase G3261.1 TTAGGATGAGTGTTTCTAGGCTAAAAGAATTTTCCTTATCCTTCTAAATCCGATACCATATTTAT 19 11996412 0.723687559 11 16 173 0.740740741 1.301029996 0 0.263157895 0.481481481 19 7 0 20 2L:11996382-11996446 6 11 124 FBgn0051864 168.2133333 28.36333333 43.04666667 0.065393152 0.387824656 0.255536627 -22 -4 -13 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2L 12036163 12036168 - 2L_12036163_12036168_- 1 1 1 0 Tom70 FBtr0080311|FBtr0080309|FBtr0080310 12036001|12036001|12035982 12036270|12036270|12036270 2L - 12036144 12036184 3'utr Tom70 FlyBase G10197.1 AAGTTAATATCGACCATACCTGTTATTTATATATATATATA 43 12036162 0.728928565 6 41 406 0.96 1.204119983 0 0.162790698 0.28 43 0 2 48 2L:12036144-12036184 6 Tom70 FBtr0080310|FBtr0080309|FBtr0080311 12035982|12036001|12036001 12036270|12036270|12036270 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2L - 12036141 12036184 3'utr Tom70 FlyBase G7868.1 AAGTTAATATCGACCATACCTGTTATTTATATATATATATATAA 29 12036162 0.735522856 4 29 257 1 1.653212514 0 0.448275862 0.644444444 29 0 0 45 2L:12036141-12036184 6 36 125 FBgn0032397 498.9933333 27.16 41.57 0.072145252 1.325478645 0.866009141 -6 -6 -6 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 2L 12045461 12045466 - 2L_12045461_12045466_- 1 1 1 0 CG6770 FBtr0080306 12045341 12045765 2L - 12045405 12045488 3'utr CG6770 FlyBase G10210.1 AAAGAAAGGCACATACTACTCTTAGCTTCTAATATATTCCTAAACTAATTCAGACTTGCAAGTTTTAGTTGCTAAGCCTTAGAG 55 12045467 0.907090788 16 54 414 0.985714286 1.537819095 0.085714286 0.218181818 0.385714286 55 0 1 69 2L:12045405-12045488 6 CG6770 FBtr0080306 12045341 12045765 TAGCTT 6mer3-8 dme-miR-79-3p 2L - 12045410 12045488 3'utr CG6770 FlyBase G7875.2 AAAGAAAGGCACATACTACTCTTAGCTTCTAATATATTCCTAAACTAATTCAGACTTGCAAGTTTTAGTTGCTAAGCCT 35 12045467 0.932264527 12 33 278 0.888888889 1.204119983 0.037037037 0.371428571 0.592592593 35 4 2 48 2L:12045410-12045488 6 26 126 FBgn0032400 867.8766667 144.29 222.0833333 0.029958174 0.180192668 0.117073171 1 1 1 0.01 dme-miR-1006-3p 8mer-A1 CGAATTTA 2L 12045681 12045688 - 2L_12045681_12045688_- 0.671697512 0.671697512 0.671697512 0 CG6770 FBtr0080306 12045341 12045765 2L - 12045668 12045787 stop_codon CG6770 FlyBase G10211.2 AGCCGCCGCCTGCAAGAACTGATGCAGGGCATCGACGGAGGCGGTGGAACAGGAGAGAAAGAAGTAACGGGGCCGCGCTGAAAGGAGAAAAGAAATCTTCGAATTTAAAAGGAAAGCAAA 122 12045689 0.979955211 8 116 547 0.951048951 2.133538908 0.181818182 0.163934426 0.286713287 122 7 0 136 2L:12045668-12045787 8 CG6770 FBtr0080306 12045341 12045765 CGAATTTA 8mer-A1 dme-miR-1006-3p 2L - 12045670 12045740 3'utr CG6770 FlyBase G7878.1 AACAGGAGAGAAAGAAGTAACGGGGCCGCGCTGAAAGGAGAAAAGAAATCTTCGAATTTAAAAGGAAAGCA 67 12045689 0.959389796 5 65 316 0.97826087 1.954242509 0.097826087 0.268656716 0.467391304 67 2 0 90 2L:12045670-12045740 8 84.5 127 FBgn0032400 867.8766667 144.29 222.0833333 0.097364065 0.58562617 0.380487805 1 1 1 0.01 dme-miR-999-3p 8mer-A1 AGTTAACA 2L 12051995 12052002 - 2L_12051995_12052002_- 0.643926235 0.643926235 0.643926235 0 JhI-21 FBtr0305089|FBtr0342608|FBtr0346427|FBtr0089655|FBtr0089656 12051753|12051753|12051753|12051753|12051753 12052229|12052229|12052229|12052229|12052229 2L - 12051948 12052020 3'utr JhI-21 FlyBase G10216.1 TTTTTTAGCGATCCCCTCAGTTAACAGGTTTTTGCAAAACCCCCGCCTTTTTGGCCCACTTCCCACAAAAGTT 18 12052005 0.962218537 8 15 119 0.833333333 0.698970004 0.166666667 0 0 18 1 2 15 2L:12051948-12052020 8 JhI-21 FBtr0089656|FBtr0346427|FBtr0089655|FBtr0305089|FBtr0342608 12051753|12051753|12051753|12051753|12051753 12052229|12052229|12052229|12052229|12052229 AGTTAACA 8mer-A1 dme-miR-999-3p 2L - 12051956 12052020 3'utr JhI-21 FlyBase G7882.1 TTTTTTAGCGATCCCCTCAGTTAACAGGTTTTTGCAAAACCCCCGCCTTTTTGGCCCACTTCCCA 8 12051973 0.969920619 7 8 53 1 1.041392685 0.181818182 0.375 0.545454545 8 0 0 11 2L:12051956-12052020 8 8.5 128 FBgn0028425 1112.883333 63.32333333 95.85666667 0.007637818 0.134231721 0.088674062 3 -29 -13 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2L 12052070 12052075 - 2L_12052070_12052075_- 1 1 1 0 JhI-21 FBtr0305089|FBtr0342608|FBtr0346427|FBtr0089655|FBtr0089656 12051753|12051753|12051753|12051753|12051753 12052229|12052229|12052229|12052229|12052229 2L - 12052035 12052445 stop_codon JhI-21 FlyBase G10217.1 AGCTGCGTGACACTCGTACTGCTGCCCAATTTGGAGGAGCCACAAAATCTGCTCATTGGCATCGGCATAACCCTGGCTGGCATTCCGTTCTACTACGCCTTCATCGCCCGAAAAAAGAAGCCCAAGTGCTACGGCCGATTGTCCAATTCCGTAGTGGAGATTTGCCGGGCCATCTTCAATACCACCATTATCGAATCGAATGAGGCTATTAACTAGGCCTACATATATGTGTGTACCACAACCGTAGAATTTATGCATTTAGTTAAAAAAAAACACTCGTAATTGATATTCGAAAAACGTGAAACTGAAAACTTGTTAAATTTGAAACCGTTTTAAGTGCCGTTTGTATGATATTTTAGCATTGCTCATCACCAAAATTGGCGTCGATTAGAATTTAGTTTTTATCGTATG 1432 12052068 0.979666652 71 1383 9932 0.965075669 2.178191841 0.120488941 0.172486034 0.31024447 1432 50 10 1658 2L:12052035-12052445 6 JhI-21 FBtr0089656|FBtr0346427|FBtr0089655|FBtr0305089|FBtr0342608 12051753|12051753|12051753|12051753|12051753 12052229|12052229|12052229|12052229|12052229 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 12052038 12052116 3'utr JhI-21 FlyBase G7883.1 GTTTTAAGTGCCGTTTGTATGATATTTTAGCATTGCTCATCACCAAAATTGGCGTCGATTAGAATTTAGTTTTTATCGT 280 12052068 0.840262515 23 260 2449 0.947115385 2.118374967 0.088942308 0.371428571 0.576923077 280 20 2 394 2L:12052038-12052116 6 329.5 129 FBgn0028425 1112.883333 63.32333333 95.85666667 0.296077756 5.203453177 3.437423932 -7 -7 -7 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 2L 12100612 12100617 + 2L_12100612_12100617_+ 1 0.99989155 0.999945775 7.67E-05 Ced-12 FBtr0080330 12100540 12100839 2L + 12100575 12100622 3'utr Ced-12 FlyBase G4188.1 GATTCATTCTAGACTCCCCCATCACCCAAGATACATGCCAAAGTGTAC 12 12100618 0.935264128 4 11 43 0.944444444 1.230448921 0 0.5 0.666666667 12 1 0 17 2L:12100575-12100622 6 Ced-12 FBtr0080330 12100540 12100839 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 2L + 12100572 12100621 3'utr Ced-12 FlyBase G3273.1 TTCGATTCATTCTAGACTCCCCCATCACCCAAGATACATGCCAAAGTGTA 12 12100583 0.885631194 5 12 67 1 1.255272505 0 0.416666667 0.611111111 12 0 0 18 2L:12100572-12100621 6 7 130 FBgn0032409 609.2533333 28.43666667 43.38333333 0.011489473 0.24616106 0.161352286 -6 29 11.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 12100649 12100654 + 2L_12100649_12100654_+ 1 1 1 0 Ced-12 FBtr0080330 12100540 12100839 2L + 12100627 12100697 3'utr Ced-12 FlyBase G4189.1 AACATAATCGTATTCTCCGATCTGATCTTCTACTAGTATTACTTGTGCAATTCCCCGAACACAAAATGAAC 38 12100649 0.989470837 11 37 354 0.977777778 1.643452676 0.2 0.184210526 0.311111111 38 1 0 44 2L:12100627-12100697 6 Ced-12 FBtr0080330 12100540 12100839 TGATCT 6mer3-8 dme-bantam-3p 2L + 12100627 12100693 3'utr Ced-12 FlyBase G3274.1 AACATAATCGTATTCTCCGATCTGATCTTCTACTAGTATTACTTGTGCAATTCCCCGAACACAAAAT 28 12100649 0.989335581 12 24 238 0.846153846 1.51851394 0.384615385 0.392857143 0.564102564 28 6 0 33 2L:12100627-12100693 6 24.5 131 FBgn0032409 609.2533333 28.43666667 43.38333333 0.040213157 0.861563709 0.564733 0 0 0 0.01 dme-bantam-3p 7mer-m8 TGATCTC 2L 12100792 12100798 - 2L_12100792_12100798_- 0.661615243 0.661615243 0.661615243 0 Patsas FBtr0080362 12100763 12101247 2L - 12100777 12100819 3'utr Patsas FlyBase G10238.1 TGTATAAAATGTGTTATTTAATGATCTCTATATATTATATACC 15 12100798 0.929621022 6 13 180 0.894736842 1.230448921 0.684210526 0.266666667 0.421052632 15 2 0 17 2L:12100777-12100819 7 Patsas FBtr0080362 12100763 12101247 TGATCTC 7mer-m8 dme-bantam-3p 2L - 12100782 12100818 3'utr Patsas FlyBase G7899.1 GTATAAAATGTGTTATTTAATGATCTCTATATATTAT 10 12100791 0.887344079 5 9 113 0.933333333 1.146128036 0.6 0.4 0.6 10 1 0 14 2L:12100782-12100818 7 12.5 132 FBgn0029137 12.51333333 0.613333333 0.946666667 0.99893447 20.38043478 13.20422535 0 -7 -3.5 0.01 dme-miR-970-3p 8mer-A1 TCTTATGA 2L 12107479 12107486 - 2L_12107479_12107486_- 0.630790218 0.630790218 0.630790218 0 Rab6 FBtr0346437|FBtr0080361 12107219|12107285 12108172|12108172 2L - 12107475 12107540 3'utr Rab6 FlyBase G10239.1 GCGAACGCGACTGCTAACTGGAACTGTGGATGGCATAGGACTTGGCCACGTGCATCTTATGAATAA 10 12107498 0.938815867 6 9 54 0.9 0.954242509 0.4 0 0 10 1 0 9 2L:12107475-12107540 8 Rab6 FBtr0346437|FBtr0080361 12107219|12107285 12108172|12108172 TCTTATGA 8mer-A1 dme-miR-970-3p 2L - 12107470 12107548 3'utr Rab6 FlyBase G7901.1 TTAGCACAGCGAACGCGACTGCTAACTGGAACTGTGGATGGCATAGGACTTGGCCACGTGCATCTTATGAATAAATATA 10 12107516 0.963745132 8 10 55 1 1.079181246 0.083333333 0.2 0.333333333 10 0 0 12 2L:12107470-12107548 8 3 133 FBgn0015797 1477.666667 97.91333333 149.3266667 0.002030228 0.030639341 0.020090183 12 30 21 0.01 dme-miR-317-3p 8mer-A1 TGTGTTCA 2L 12107651 12107658 - 2L_12107651_12107658_- 0.631136783 0.631136783 0.631136783 0 Rab6 FBtr0346437|FBtr0080361 12107219|12107285 12108172|12108172 2L - 12107636 12107688 3'utr Rab6 FlyBase G10240.1 CCAGCAGTCGTAGATACCACGCAGCCAGTCTGTGTTCAATGATTCCACCAGCC 63 12107659 0.828854345 9 58 416 0.943661972 1.826074803 0.183098592 0.111111111 0.211267606 63 4 0 67 2L:12107636-12107688 8 Rab6 FBtr0346437|FBtr0080361 12107219|12107285 12108172|12108172 TGTGTTCA 8mer-A1 dme-miR-317-3p 2L - 12107626 12107690 3'utr Rab6 FlyBase G7902.1 CTCCAGCAGTCGTAGATACCACGCAGCCAGTCTGTGTTCAATGATTCCACCAGCCAGGCATTTTG 26 12107659 0.97817345 8 24 159 0.941176471 1.505149978 0.205882353 0.269230769 0.441176471 26 2 0 32 2L:12107626-12107690 8 38 134 FBgn0015797 1477.666667 97.91333333 149.3266667 0.025716219 0.388098318 0.254475646 1 1 1 0.01 dme-miR-252-5p 7mer-m8 GTACTTA 2L 12107740 12107746 - 2L_12107740_12107746_- 0.588089437 0.588299905 0.588194671 0.000148846 Rab6 FBtr0346437|FBtr0080361 12107219|12107285 12108172|12108172 2L - 12107713 12107763 3'utr Rab6 FlyBase G10241.1 AAAAAACCCAAGACCATGTACTTATGTCAGGCCAGGCGGTCCCAGGATCCT 18 12107747 0.958349405 3 17 84 1 1.255272505 0.055555556 0 0 18 0 0 18 2L:12107713-12107763 7 Rab6 FBtr0346437|FBtr0080361 12107219|12107285 12108172|12108172 GTACTTA 7mer-m8 dme-miR-252-5p 2L - 12107718 12107762 3'utr Rab6 FlyBase G7903.1 AAAAACCCAAGACCATGTACTTATGTCAGGCCAGGCGGTCCCAGG 13 12107747 0.966781849 2 12 64 0.944444444 1.230448921 0 0.384615385 0.555555556 13 1 0 17 2L:12107718-12107762 7 14.5 135 FBgn0015797 1477.666667 97.91333333 149.3266667 0.009812768 0.148090148 0.097102549 1 1 1 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2L 12171289 12171294 - 2L_12171289_12171294_- 1 1 1 0 CG6583 FBtr0080358 12171202 12171697 2L - 12171234 12171333 3'utr CG6583 FlyBase G10249.1 CCGAAAATGCTTACGTTTGACATATTTATTACTAGTATTTACCTGCCATATCCGAATAACCACTACCATATCGAAAAACCAGTAAATTGTACACACAGAA 20 12171295 0.986393499 6 17 144 0.923076923 1.079181246 0.038461538 0.3 0.461538462 20 1 1 24 2L:12171234-12171333 6 CG6583 FBtr0080358 12171202 12171697 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2L - 12171248 12171336 3'utr CG6583 FlyBase G7909.1 ATTCCGAAAATGCTTACGTTTGACATATTTATTACTAGTATTTACCTGCCATATCCGAATAACCACTACCATATCGAAAAACCAGTAAA 17 12171296 0.983026609 9 17 134 1 1.342422681 0.045454545 0.176470588 0.363636364 17 0 0 22 2L:12171248-12171336 6 12.5 136 FBgn0032420 73.66666667 8.476666667 12.93333333 0.169683258 1.474636256 0.966494845 1 2 1.5 0.01 dme-miR-184-3p 8mer-A1 TCCGTCCA 2L 12173897 12173904 + 2L_12173897_12173904_+ 0.631136385 0.631136385 0.631136385 0 crok FBtr0080342 12173602 12174091 2L + 12173829 12173970 3'utr crok FlyBase G4207.1 GAGCGATGTGTAATCAAGTGCCTTTTCTGTAACGGACTCGTATTGTAACTTAAGCCTGGAATACTATTTCCGTCCAAAAAATATCTTACGCCTATGACATTCCATCTCGTAAACTGAATCTTGTAATACTTTCTATTTTCTA 765 12173896 0.979153126 20 743 5110 0.973952435 2.633468456 0.005662514 0.130718954 0.246885617 765 22 1 860 2L:12173829-12173970 8 crok FBtr0080342 12173602 12174091 TCCGTCCA 8mer-A1 dme-miR-184-3p 2L + 12173828 12173960 3'utr crok FlyBase G3289.1 TGAGCGATGTGTAATCAAGTGCCTTTTCTGTAACGGACTCGTATTGTAACTTAAGCCTGGAATACTATTTCCGTCCAAAAAATATCTTACGCCTATGACATTCCATCTCGTAAACTGAATCTTGTAATACTTT 477 12173896 0.978275238 23 460 3084 0.958333333 2.139879086 0.005555556 0.368972746 0.581944444 477 26 4 690 2L:12173828-12173960 8 568.5 137 FBgn0032421 76 9.133333333 13.88666667 7.480263158 62.24452555 40.93855017 1 1 1 0.01 dme-miR-932-5p 6mer3-8 GGAATT 2L 122680 122685 - 2L_122680_122685_- 0.591720885 0.591720885 0.591720885 0 CG3164 FBtr0078153|FBtr0078155|FBtr0100379|FBtr0078154 122622|122622|122622|122622 123128|123128|123128|123128 2L - 122668 122710 3'utr CG3164 FlyBase G6327.1 TATTCAAGGTACTTTAAGACCCTTTGGAATTTTTTGTAATATT 11 122687 0.755698906 5 10 90 1 1.230448921 0 0.363636364 0.588235294 11 0 0 17 2L:122668-122710 6 CG3164 FBtr0100379|FBtr0078154|FBtr0078153|FBtr0078155 122622|122622|122622|122622 123128|123128|123128|123128 GGAATT 6mer3-8 dme-miR-932-5p 2L - 122639 122703 3'utr CG3164 FlyBase G4943.1 GGTACTTTAAGACCCTTTGGAATTTTTTGTAATATTTTCTTATTACAGGTTTAGAATAAACATTT 17 122678 0.819502112 10 15 162 0.863636364 0.67669361 0.090909091 0.294117647 0.454545455 17 0 3 19 2L:122639-122703 6 9 138 FBgn0025683 1716.21 73.79 112.3166667 0.005244113 0.121967746 0.080130583 2 -7 -2.5 0.01 dme-miR-92b-3p 8mer-A1 GTGCAATA 2L 12403309 12403316 - 2L_12403309_12403316_- 0.628916032 0.628916032 0.628916032 0 vir-1 FBtr0100125|FBtr0334761|FBtr0080390|FBtr0080389|FBtr0305263 12403268|12403268|12403268|12403268|12403268 12403580|12403580|12403580|12403580|12403580 2L - 12403274 12403320 3'utr vir-1 FlyBase G10252.1 TGAAGTGCAATAAAATATATGCGATGTCTTTGATAAAACTGACTATT 9 12403303 0.9806546 3 9 65 1 1 0.1 0.111111111 0.2 9 0 0 10 2L:12403274-12403320 8 vir-1 FBtr0305263|FBtr0080389|FBtr0080390|FBtr0334761|FBtr0100125 12403268|12403268|12403268|12403268|12403268 12403580|12403580|12403580|12403580|12403580 GTGCAATA 8mer-A1 dme-miR-92b-3p 2L - 12403278 12403312 3'utr vir-1 FlyBase G7912.1 AATAAAATATATGCGATGTCTTTGATAAAACTGAC 8 12403303 0.969674885 2 8 56 1 1.079181246 0.25 0.375 0.583333333 8 0 0 12 2L:12403278-12403312 4 7.5 139 FBgn0043841 3920.323333 419.3833333 639.8233333 0.001913108 0.0178834 0.011721986 -13 -13 -13 0.01 dme-miR-8-3p 7mer-A1 AGTATTA 2L 12403424 12403430 - 2L_12403424_12403430_- 0.823349562 0.823349562 0.823349562 0 vir-1 FBtr0100125|FBtr0334761|FBtr0080390|FBtr0080389|FBtr0305263 12403268|12403268|12403268|12403268|12403268 12403580|12403580|12403580|12403580|12403580 2L - 12403414 12403444 3'utr vir-1 FlyBase G10253.1 TTTCACAGACAACGAGTATTATGTATGCAAG 6 12403423 0.956170905 3 6 29 1 0.954242509 0.222222222 0.5 0.666666667 6 0 0 9 2L:12403414-12403444 7 vir-1 FBtr0305263|FBtr0080389|FBtr0080390|FBtr0334761|FBtr0100125 12403268|12403268|12403268|12403268|12403268 12403580|12403580|12403580|12403580|12403580 AGTATTA 7mer-A1 dme-miR-8-3p 2L - 12403418 12403446 3'utr vir-1 FlyBase G7913.1 ATTTTCACAGACAACGAGTATTATGTATG 10 12403423 0.644779254 3 10 54 1 1.146128036 0 0.4 0.571428571 10 0 0 14 2L:12403418-12403446 7 8 140 FBgn0043841 3920.323333 419.3833333 639.8233333 0.002040648 0.019075627 0.012503451 -7 -7 -7 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2L 12403483 12403489 - 2L_12403483_12403489_- 0.823349562 0.823349562 0.823349562 0 vir-1 FBtr0100125|FBtr0334761|FBtr0080390|FBtr0080389|FBtr0305263 12403268|12403268|12403268|12403268|12403268 12403580|12403580|12403580|12403580|12403580 2L - 12403453 12403525 3'utr vir-1 FlyBase G10254.1 GCTTGTAAACATAAAACGAGGATATCTCTGAGAGATCCAAAGAAATCGGCGCTCATTTCATCCGTAATTTATC 24 12403497 0.817183334 5 22 114 0.933333333 1.447158031 0.1 0.208333333 0.366666667 24 2 0 28 2L:12403453-12403525 7 vir-1 FBtr0305263|FBtr0080389|FBtr0080390|FBtr0334761|FBtr0100125 12403268|12403268|12403268|12403268|12403268 12403580|12403580|12403580|12403580|12403580 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 12403457 12403513 3'utr vir-1 FlyBase G7914.1 AAAACGAGGATATCTCTGAGAGATCCAAAGAAATCGGCGCTCATTTCATCCGTAATT 24 12403497 0.730113815 8 21 110 0.857142857 0.77815125 0.142857143 0.333333333 0.542857143 24 1 4 30 2L:12403457-12403513 7 16.5 141 FBgn0043841 3920.323333 419.3833333 639.8233333 0.004208837 0.039343481 0.025788369 8 8 8 0.01 dme-miR-1003-3p 6mer2-7 TGTGAG 2L 12426966 12426971 - 2L_12426966_12426971_- 1 1 1 0 CG5446 FBtr0080388|FBtr0333093|FBtr0333094 12426898|12426898|12426629 12427225|12427225|12427225 2L - 12426938 12426988 3'utr CG5446 FlyBase G10266.1 AAGTAAAGTAATTCTTTTGTGAGCAATGGCCAATAATTTTGAATTATTGCC 11 12426973 0.986215474 5 10 86 0.916666667 0.740362689 0 0.090909091 0.166666667 11 0 1 11 2L:12426938-12426988 6 CG5446 FBtr0333094|FBtr0080388|FBtr0333093 12426629|12426898|12426898 12427225|12427225|12427225 TGTGAG 6mer2-7 dme-miR-1003-3p 2L - 12426949 12426982 3'utr CG5446 FlyBase G7925.1 AGTAATTCTTTTGTGAGCAATGGCCAATAATTTT 5 12426972 0.643184605 3 5 44 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2L:12426949-12426982 6 7.5 142 FBgn0032429 186 33.08333333 50.87 0.040322581 0.226700252 0.147434637 2 1 1.5 0.01 dme-miR-318-3p 6mer3-8 CCCAGT 2L 12427140 12427145 - 2L_12427140_12427145_- 1 1 1 0 CG5446 FBtr0080388|FBtr0333093|FBtr0333094 12426898|12426898|12426629 12427225|12427225|12427225 2L - 12427059 12427203 3'utr CG5446 FlyBase G10267.2 ACGCCCATTCGGAAAGTGCATCCCAATACCATTAGATACATACATCGAACACCTGGCACCCAGTCACCCGTATCAAGTTTACAATTCCAGGTTCTCACATTCATTTAATCTCCTCCGCACCCAGCTGCTCCCCAAGAAATGAAGA 41 12427119 0.974603774 17 37 210 0.92 1.662757832 0.08 0.170731707 0.32 41 4 0 46 2L:12427059-12427203 6 CG5446 FBtr0333094|FBtr0080388|FBtr0333093 12426629|12426898|12426898 12427225|12427225|12427225 CCCAGT 6mer3-8 dme-miR-318-3p 2L - 12427034 12427162 3'utr CG5446 FlyBase G7926.1 ACATCGAACACCTGGCACCCAGTCACCCGTATCAAGTTTACAATTCCAGGTTCTCACATTCATTTAATCTCCTCCGCACCCAGCTGCTCCCCAAGAAATGAAGAAAAGAACACATTTGCTCATCCATTT 24 12427119 0.96469758 7 20 127 0.742857143 0.937852093 0 0.416666667 0.6 24 7 2 26 2L:12427034-12427162 6 6.5 143 FBgn0032429 186 33.08333333 50.87 0.034946237 0.196473552 0.127776686 -26 -26 -26 0.01 dme-miR-277-3p 6mer3-8 TGCATT 2L 12439867 12439872 + 2L_12439867_12439872_+ 1 1 1 0 Elf FBtr0333089|FBtr0080369|FBtr0344859|FBtr0333090 12439563|12439563|12439563|12439563 12441279|12440602|12440602|12440602 2L + 12439793 12439890 3'utr Elf FlyBase G4233.1 CGGAACGGAACGGCAATGTAGGCAGGCGAAAAGTTAATTTACAACAAGGACGAGTTCGGAGATAGAAACAGAAATGCATTATATACGAATTATAAACT 42 12439871 0.958182844 9 40 195 0.978723404 1.662757832 0.085106383 0.119047619 0.212765957 42 1 0 46 2L:12439793-12439890 6 Elf FBtr0344859|FBtr0333090|FBtr0333089|FBtr0080369 12439563|12439563|12439563|12439563 12440602|12440602|12441279|12440602 TGCATT 6mer3-8 dme-miR-277-3p 2L + 12439838 12439876 3'utr Elf FlyBase G3312.1 AAGGACGAGTTCGGAGATAGAAACAGAAATGCATTATAT 18 12439871 0.69487766 5 16 91 0.916666667 1.342422681 0 0.333333333 0.5 18 2 0 22 2L:12439838-12439876 6 24.5 144 FBgn0020443 5168.45 195.0133333 300.5566667 0.004740299 0.125632435 0.08151541 -4 -4 -4 0.01 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA 2L 12440009 12440016 + 2L_12440009_12440016_+ 0.627007348 0.627007348 0.627007348 0 Elf FBtr0333089|FBtr0080369|FBtr0344859|FBtr0333090 12439563|12439563|12439563|12439563 12441279|12440602|12440602|12440602 2L + 12439984 12440026 3'utr Elf FlyBase G4234.1 TATATATGCAAAGAGAGAGAAAGAGTTGAAGAAGAGGAGTTGC 14 12440009 0.848260403 4 12 29 0.85 1.230448921 0.45 0.285714286 0.5 14 3 0 17 2L:12439984-12440026 8 Elf FBtr0344859|FBtr0333090|FBtr0333089|FBtr0080369 12439563|12439563|12439563|12439563 12440602|12440602|12441279|12440602 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p 2L + 12439981 12440027 3'utr Elf FlyBase G3313.1 ACGTATATATGCAAAGAGAGAGAAAGAGTTGAAGAAGAGGAGTTGCA 9 12440009 0.755924404 3 8 20 0.923076923 0.77815125 0.461538462 0.444444444 0.615384615 9 0 1 12 2L:12439981-12440027 8 10 145 FBgn0020443 5168.45 195.0133333 300.5566667 0.001934816 0.051278545 0.033271596 0 0 0 0.01 dme-miR-968-5p 7mer-A1 CTACTTA 2L 12440481 12440487 + 2L_12440481_12440487_+ 0.82333965 0.823295115 0.823317382 3.15E-05 Elf FBtr0333089|FBtr0080369|FBtr0344859|FBtr0333090 12439563|12439563|12439563|12439563 12441279|12440602|12440602|12440602 2L + 12440460 12440491 3'utr Elf FlyBase G4236.1 ATTTAAAACCATTTGATTTTGCTACTTAAAAC 6 12440479 0.956390759 3 6 51 1 0.903089987 0 0.166666667 0.375 6 0 0 8 2L:12440460-12440491 7 Elf FBtr0344859|FBtr0333090|FBtr0333089|FBtr0080369 12439563|12439563|12439563|12439563 12440602|12440602|12441279|12440602 CTACTTA 7mer-A1 dme-miR-968-5p 2L + 12440464 12440498 3'utr Elf FlyBase G3315.1 AAAACCATTTGATTTTGCTACTTAAAACACATTTG 5 12440479 0.976572703 2 4 39 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 2L:12440464-12440498 7 5.5 146 FBgn0020443 5168.45 195.0133333 300.5566667 0.001064149 0.0282032 0.018299378 2 2 2 0.01 dme-miR-970-3p 8mer-A1 TCTTATGA 2L 12452005 12452012 - 2L_12452005_12452012_- 0.630790218 0.630790218 0.630790218 0 CG5418 FBtr0080382 12451943 12452060 2L - 12451966 12452021 3'utr CG5418 FlyBase G10276.1 TTTAATTGTTCTTATGATTTGTCTTGGCACATTGGATCGATCTTAAGTTTACGAAT 10 12452012 0.9944873 6 9 113 0.833333333 1 0.083333333 0.2 0.333333333 10 2 0 10 2L:12451966-12452021 8 CG5418 FBtr0080382 12451943 12452060 TCTTATGA 8mer-A1 dme-miR-970-3p 2L - 12451972 12452029 3'utr CG5418 FlyBase G7931.1 AGAATAACTTTAATTGTTCTTATGATTTGTCTTGGCACATTGGATCGATCTTAAGTTT 8 12452010 0.988322705 7 8 81 1 1 0.3 0.125 0.3 8 0 0 10 2L:12451972-12452029 8 5.5 147 FBgn0032436 3.666666667 0.376666667 0.583333333 1.5 14.60176991 9.428571429 0 -2 -1 0.01 dme-miR-12-5p 6mer2-7 ATACTC 2L 12455886 12455891 - 2L_12455886_12455891_- 1 1 1 0 bun FBtr0339528|FBtr0300523|FBtr0299652 12455538|12455538|12455538 12457755|12457755|12457755 2L - 12455650 12455934 3'utr bun FlyBase G10281.2 GAAAATTATCATCCAAAATGAAAAGGGATTAAAACCAAATATGATACTCCAACTCCAAGTGCCGAAAACTAGCTGTCTACAGGGCAAACACCAATGGACAGACAAATCAGATAGACGGACGGACAGGACAGACTAATGTCACATCCCCCGAACACAGTAATTCTGTTGAAAAGTATTTCCCTTTATGATTTTTGTATTCAATTCAGAGAACCATCTTCATGCGTTTCATGTTTAGTTCTTCTCCTATGAGTTTTACGACTTAAGCCTCTTTTTAAGCTAACTATT 150 12455893 0.986153183 28 145 814 0.966850829 2.243038049 0.082872928 0.173333333 0.314917127 150 6 0 175 2L:12455650-12455934 6 bun FBtr0299652|FBtr0300523|FBtr0339528 12455538|12455538|12455538 12457755|12457755|12457755 ATACTC 6mer2-7 dme-miR-12-5p 2L - 12455845 12455994 3'utr bun FlyBase G7938.1 AGAACACAAAATGCAGCCTGCGGAGACGCAAATTGTCTAAGGCTAGCGTGGATTAAACAAGAAAATTATCATCCAAAATGAAAAGGGATTAAAACCAAATATGATACTCCAACTCCAAGTGCCGAAAACTAGCTGTCTACAGGGCAAACA 68 12455893 0.953924569 12 62 283 0.934065934 1.929418926 0.021978022 0.25 0.43956044 68 6 0 85 2L:12455845-12455994 6 65.5 148 FBgn0259176 10573.67 421.1233333 647.0833333 0.006194633 0.155536383 0.101223439 2 2 2 0.01 dme-miR-2b-2-5p 6mer2-7 TGAAGA 2L 12456336 12456341 - 2L_12456336_12456341_- 1 1 1 0 bun FBtr0339528|FBtr0300523|FBtr0299652 12455538|12455538|12455538 12457755|12457755|12457755 2L - 12456312 12456468 3'utr bun FlyBase G10284.2 AAATATTGTGTAAAACTAAAAACTAAAATTGAGAACAAACTTCGAAAGTCGCCGACGAGGAAGATACATTGCAACAAAAATTTAAATCACACAAAATCAACATGATGGAAAAGCTAAAATTGTAAGATGAAGACAAACTCGTCCTATTTTTTGTTAA 51 12456323 0.977286609 18 49 270 0.965517241 1.748188027 0.172413793 0.137254902 0.24137931 51 2 0 56 2L:12456312-12456468 6 bun FBtr0299652|FBtr0300523|FBtr0339528 12455538|12455538|12455538 12457755|12457755|12457755 TGAAGA 6mer2-7 dme-miR-2b-2-5p 2L - 12456313 12456367 3'utr bun FlyBase G7941.1 ATGATGGAAAAGCTAAAATTGTAAGATGAAGACAAACTCGTCCTATTTTTTGTTA 27 12456324 0.681168414 7 26 142 0.934782609 1.031408464 0.239130435 0.444444444 0.673913043 27 0 3 43 2L:12456313-12456367 6 27.5 149 FBgn0259176 10573.67 421.1233333 647.0833333 0.0026008 0.065301535 0.04249839 -18 -17 -17.5 0.01 dme-miR-980-5p 7mer-m1 AAAAACT 2L 12456500 12456506 - 2L_12456500_12456506_- 0.765586663 0.765586663 0.765586663 0 bun FBtr0339528|FBtr0300523|FBtr0299652 12455538|12455538|12455538 12457755|12457755|12457755 2L - 12456494 12456538 3'utr bun FlyBase G10285.1 AGAAAGCTTATCAAAATTGTTTGTTAAACTCTAAAAACTATCTGC 5 12456517 0.987093955 4 5 39 1 0.698970004 0 0 0 5 0 0 5 2L:12456494-12456538 7 bun FBtr0299652|FBtr0300523|FBtr0339528 12455538|12455538|12455538 12457755|12457755|12457755 AAAAACT 7mer-m1 dme-miR-980-5p 2L - 12456445 12456538 3'utr bun FlyBase G7943.1 AGAAAGCTTATCAAAATTGTTTGTTAAACTCTAAAAACTATCTGCAAACAAAAAACCCAAAAATATCTGTAAATATTGTGTAAAACTAAAAACT 11 12456498 0.98448074 8 8 64 0.684210526 1.113943352 0 0.545454545 0.736842105 11 6 0 13 2L:12456445-12456538 7 3.5 150 FBgn0259176 10573.67 421.1233333 647.0833333 0.000331011 0.008311104 0.005408886 11 -8 1.5 0.01 dme-miR-988-3p 8mer-m1 ACAAGGGG 2L 12456705 12456712 - 2L_12456705_12456712_- 0.628235101 0.628235101 0.628235101 0 bun FBtr0339528|FBtr0299658|FBtr0346622|FBtr0300523|FBtr0300522|FBtr0299652|FBtr0300524|FBtr0299656 12455538|12456575|12456575|12455538|12456575|12455538|12456575|12456575 12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755 2L - 12456644 12456738 3'utr bun FlyBase G10287.1 TTAATCCTAACTTTTATTGTAAAAATACAAGGGGAAATATTAACTACATCATAAATATGAATATGTTTCAAATTAAACAATGGATAACAAAAAAA 88 12456713 0.965473444 13 80 418 0.95412844 2.017033339 0.027522936 0.215909091 0.366972477 88 5 0 104 2L:12456644-12456738 8 bun FBtr0300524|FBtr0299656|FBtr0300522|FBtr0299652|FBtr0346622|FBtr0300523|FBtr0339528|FBtr0299658 12456575|12456575|12456575|12455538|12456575|12455538|12455538|12456575 12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755 ACAAGGGG 8mer-m1 dme-miR-988-3p 2L - 12456647 12456735 3'utr bun FlyBase G7945.1 ATCCTAACTTTTATTGTAAAAATACAAGGGGAAATATTAACTACATCATAAATATGAATATGTTTCAAATTAAACAATGGATAACAAAA 59 12456713 0.973930095 10 53 322 0.916666667 1.58546073 0.05952381 0.355932203 0.547619048 59 6 1 77 2L:12456647-12456735 8 67 151 FBgn0259176 10573.67 421.1233333 647.0833333 0.006336494 0.159098285 0.103541533 1 1 1 0.01 dme-miR-14-3p 6mer2-7 AGACTG 2L 12457318 12457323 - 2L_12457318_12457323_- 1 1 1 0 bun FBtr0339528|FBtr0299658|FBtr0299657|FBtr0346622|FBtr0300523|FBtr0300521|FBtr0300522|FBtr0299652|FBtr0300524|FBtr0299656 12455538|12456575|12457136|12456575|12455538|12456885|12456575|12455538|12456575|12456575 12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755 2L - 12457211 12457561 5'utr bun FlyBase G10290.1 AGCAATAGCAGCGCAGCGGCAGGCAGACTCACCCAAACATGTTAAGTTCGTGTTAGGTAGACTAGCCTGCTGTTAAGAATTGTTATGTTGTTGCTGGCTGTTAATCTGCTGCAGCCGCCGTTTTGTTAATTTCTCGATTGTGATATTTGTTTAACACACATACAGACCACCACACACACACACACTCATACGCATTTACACACACATCCATACGAAATACACACACAAACACACAGATAGACTGCACGCTAACAGCGGCTGCGGCTGGCGCTGTTAACGTCCGCTGTTAACTCGAAGCGAGTATAGGAGTTCTTTTAAATATCGCGCTGCTGCGCCTCCACATTTTTGTTT 3062 12457324 0.994606079 68 2920 18402 0.95735901 1.77815125 0.049793673 0.153494448 0.2869326 3062 98 57 3480 2L:12457211-12457561 6 bun FBtr0300524|FBtr0299656|FBtr0300522|FBtr0299652|FBtr0299657|FBtr0346622|FBtr0300523|FBtr0300521|FBtr0339528|FBtr0299658 12456575|12456575|12456575|12455538|12457136|12456575|12455538|12456885|12455538|12456575 12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755 AGACTG 6mer2-7 dme-miR-14-3p 2L - 12457257 12457395 5'utr bun FlyBase G7948.1 CCACCACACACACACACACTCATACGCATTTACACACACATCCATACGAAATACACACACAAACACACAGATAGACTGCACGCTAACAGCGGCTGCGGCTGGCGCTGTTAACGTCCGCTGTTAACTCGAAGCGAGTATA 965 12457324 0.98266962 17 922 2062 0.965362412 2.098355254 0.030788967 0.421761658 0.642078255 965 43 11 1505 2L:12457257-12457395 6 1273.5 152 FBgn0259176 10573.67 421.1233333 647.0833333 0.12044068 3.024054711 1.968061816 1 1 1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 12457417 12457423 - 2L_12457417_12457423_- 0.801970432 0.801162314 0.801566373 0.000571413 bun FBtr0339528|FBtr0339528|FBtr0339528|FBtr0299658|FBtr0299658|FBtr0299658|FBtr0299657|FBtr0299657|FBtr0299657|FBtr0346622|FBtr0346622|FBtr0346622|FBtr0300523|FBtr0300523|FBtr0300523|FBtr0300521|FBtr0300521|FBtr0300521|FBtr0300522|FBtr0300522|FBtr0300522|FBtr0299652|FBtr0299652|FBtr0299652|FBtr0300524|FBtr0300524|FBtr0300524|FBtr0299656|FBtr0299656|FBtr0299656 12455538|12455538|12455538|12456575|12456575|12456575|12457136|12457136|12457136|12456575|12456575|12456575|12455538|12455538|12455538|12456885|12456885|12456885|12456575|12456575|12456575|12455538|12455538|12455538|12456575|12456575|12456575|12456575|12456575|12456575 12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755 2L - 12457211 12457561 5'utr bun FlyBase G10290.1 AGCAATAGCAGCGCAGCGGCAGGCAGACTCACCCAAACATGTTAAGTTCGTGTTAGGTAGACTAGCCTGCTGTTAAGAATTGTTATGTTGTTGCTGGCTGTTAATCTGCTGCAGCCGCCGTTTTGTTAATTTCTCGATTGTGATATTTGTTTAACACACATACAGACCACCACACACACACACACTCATACGCATTTACACACACATCCATACGAAATACACACACAAACACACAGATAGACTGCACGCTAACAGCGGCTGCGGCTGGCGCTGTTAACGTCCGCTGTTAACTCGAAGCGAGTATAGGAGTTCTTTTAAATATCGCGCTGCTGCGCCTCCACATTTTTGTTT 3062 12457424 0.994606079 68 2920 18402 0.95735901 1.77815125 0.049793673 0.153494448 0.2869326 3062 98 57 3480 2L:12457211-12457561 7 bun FBtr0300524|FBtr0300524|FBtr0300524|FBtr0299656|FBtr0299656|FBtr0299656|FBtr0300522|FBtr0300522|FBtr0300522|FBtr0299652|FBtr0299652|FBtr0299652|FBtr0299657|FBtr0299657|FBtr0299657|FBtr0346622|FBtr0346622|FBtr0346622|FBtr0300523|FBtr0300523|FBtr0300523|FBtr0300521|FBtr0300521|FBtr0300521|FBtr0339528|FBtr0339528|FBtr0339528|FBtr0299658|FBtr0299658|FBtr0299658 12456575|12456575|12456575|12456575|12456575|12456575|12456575|12456575|12456575|12455538|12455538|12455538|12457136|12457136|12457136|12456575|12456575|12456575|12455538|12455538|12455538|12456885|12456885|12456885|12455538|12455538|12455538|12456575|12456575|12456575 12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 12457398 12457533 5'utr bun FlyBase G7949.1 TCACCCAAACATGTTAAGTTCGTGTTAGGTAGACTAGCCTGCTGTTAAGAATTGTTATGTTGTTGCTGGCTGTTAATCTGCTGCAGCCGCCGTTTTGTTAATTTCTCGATTGTGATATTTGTTTAACACACATACA 824 12457424 0.9933989 34 773 9476 0.938690969 1.753199914 0.090306545 0.347087379 0.554266777 824 55 19 1133 2L:12457398-12457533 7 974 153 FBgn0259176 10573.67 421.1233333 647.0833333 0.092115604 2.312861632 1.505215712 1 1 1 0.01 dme-miR-999-3p 6mer2-7 GTTAAC 2L 12457642 12457647 - 2L_12457642_12457647_- 1 1 1 0 bun FBtr0339528|FBtr0299658|FBtr0299657|FBtr0346622|FBtr0300523|FBtr0300521|FBtr0300522|FBtr0299652|FBtr0300524|FBtr0299656 12455538|12456575|12457136|12456575|12455538|12456885|12456575|12455538|12456575|12456575 12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755 2L - 12457620 12457996 stop_codon bun FlyBase G10291.1 TGCTCCAGCTGCCGCGGGTCAGGCAGTTCAGCAGCAGGCCGCTGGAGCGGTAGCGGTAACGGGTGTGGCCACCAGTCCAGCGTCCGCGGTGGTACCCACGAGCATTCCCAACGGCAGCGCCGAGAACGGCAGCAGTGCAGTCGAGTCAGCAGCGGTATCGGTGGAGCAGCAGGTGCAGCAGGTGACATCAGCAGCGGCAGCAGCAGCATCGGTAGTCACAGCCAATGGTCCCATGTCCTAAACAGTTGCTGCTGTGGCCCGAACACACAGTGTTTGTTTTTTTTAAGGCGCCCACGCACCGTGGTGTGTGTGGGGGGAAATGAACGTTTTTAAGAATGAAAACCGTAATGTTAACTCAGCCGCAGTCTCTTTCTTAG 216 12457666 0.963967427 46 197 1025 0.924 1.761551989 0.244 0.143518519 0.26 216 16 3 231 2L:12457620-12457996 6 bun FBtr0300524|FBtr0299656|FBtr0300522|FBtr0299652|FBtr0299657|FBtr0346622|FBtr0300523|FBtr0300521|FBtr0339528|FBtr0299658 12456575|12456575|12456575|12455538|12457136|12456575|12455538|12456885|12455538|12456575 12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755 GTTAAC 6mer2-7 dme-miR-999-3p 2L - 12457627 12457718 5'utr bun FlyBase G7951.1 TTTTTTAAGGCGCCCACGCACCGTGGTGTGTGTGGGGGGAAATGAACGTTTTTAAGAATGAAAACCGTAATGTTAACTCAGCCGCAGTCTCT 67 12457666 0.975158716 12 59 375 0.886597938 1.457377197 0.257731959 0.313432836 0.525773196 67 9 2 86 2L:12457627-12457718 6 36.5 154 FBgn0259176 10573.67 421.1233333 647.0833333 0.003451971 0.086672946 0.056406954 19 19 19 0.01 dme-miR-970-3p 7mer-m8 TCTTATG 2L 12690454 12690460 - 2L_12690454_12690460_- 0.658999343 0.658999343 0.658999343 0 CG5525 FBtr0080411 12690334 12690537 2L - 12690457 12690512 3'utr CG5525 FlyBase G10308.1 GTCTGCCTCTGATCAAGATCAATCTTCACGCAAATTCATCTAAAGTCTCACATCTT 12 12690472 0.806102959 5 11 88 0.916666667 0.740362689 0.333333333 0 0 12 0 1 11 2L:12690457-12690512 3 CG5525 FBtr0080411 12690334 12690537 TCTTATG 7mer-m8 dme-miR-970-3p 2L - 12690457 12690512 3'utr CG5525 FlyBase G7966.1 GTCTGCCTCTGATCAAGATCAATCTTCACGCAAATTCATCTAAAGTCTCACATCTT 7 12690472 0.735204266 4 6 44 1 0.903089987 0.5 0.142857143 0.25 7 0 0 8 2L:12690457-12690512 3 5.5 155 FBgn0032444 3029.9 191.6766667 292.56 0.001815241 0.028694155 0.018799562 12 12 12 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 12708635 12708640 + 2L_12708635_12708640_+ 1 1 1 0 CG6180 FBtr0080398|FBtr0080398|FBtr0080398 12708543|12708543|12708543 12708680|12708680|12708680 2L + 12708558 12708658 3'utr CG6180 FlyBase G4258.1 AACCATGCTTATATAAGCCAGTCTGAATTGGATTCAAATCTATTGTAACCTAGAAATTAAAGACACCTATGAACACTCTGTGAAACCCTCTGTTGCTGGCA 130 12708634 0.763928041 15 117 729 0.896774194 1.540954809 0.24516129 0.184615385 0.316129032 130 13 3 139 2L:12708558-12708658 6 CG6180 FBtr0080398|FBtr0080398|FBtr0080398 12708543|12708543|12708543 12708680|12708680|12708680 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 12708550 12708662 3'utr CG6180 FlyBase G3331.1 ACGCCAAAAACCATGCTTATATAAGCCAGTCTGAATTGGATTCAAATCTATTGTAACCTAGAAATTAAAGACACCTATGAACACTCTGTGAAACCCTCTGTTGCTGGCAATAA 62 12708633 0.961440018 17 59 339 0.955555556 1.633468456 0.144444444 0.274193548 0.5 62 3 1 86 2L:12708550-12708662 6 69 156 FBgn0032453 1365.473333 166.0266667 253.2533333 0.050531928 0.415595888 0.272454459 1 2 1.5 0.01 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 12713308 12713314 - 2L_12713308_12713314_- 0.822971461 0.821378717 0.822175089 0.00112628 Pih1D1 FBtr0089908 12713274 12713339 2L - 12713276 12713327 3'utr Pih1D1 FlyBase G10347.1 ATGAATAATGCCCGCTGTGATAATGTTAATAAAGGCGCAAATTTTACAATTT 35 12713319 0.977756556 6 33 220 0.959183673 1.672097858 0.204081633 0.285714286 0.489795918 35 2 0 47 2L:12713276-12713327 7 Pih1D1 FBtr0089908 12713274 12713339 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L - 12713276 12713327 3'utr Pih1D1 FlyBase G8000.1 ATGAATAATGCCCGCTGTGATAATGTTAATAAAGGCGCAAATTTTACAATTT 30 12713319 0.763971088 8 25 189 0.891304348 1.612783857 0.130434783 0.366666667 0.586956522 30 5 0 41 2L:12713276-12713327 7 31 157 FBgn0032455 841.0766667 43.54 66.97 0.03685752 0.711988976 0.462893833 5 5 5 0.01 dme-miR-999-3p 6mer2-7 GTTAAC 2L 12744183 12744188 + 2L_12744183_12744188_+ 1 1 1 0 MRP FBtr0090014|FBtr0090013|FBtr0090027|FBtr0090022|FBtr0090024|FBtr0090028|FBtr0090017|FBtr0090026|FBtr0090020|FBtr0090016|FBtr0090021|FBtr0090029|FBtr0090015|FBtr0090023|FBtr0090025|FBtr0090019|FBtr0090018 12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170 12744806|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807 2L + 12744160 12744201 stop_codon MRP FlyBase G4268.1 AATCTAGTTTAAGATCCATGAATGTTAACTTGAAACTCCACG 5 12744182 0.975687607 3 5 35 1 0.84509804 0.142857143 0.2 0.428571429 5 0 0 7 2L:12744160-12744201 6 MRP FBtr0090015|FBtr0090023|FBtr0090026|FBtr0090019|FBtr0090018|FBtr0090016|FBtr0090020|FBtr0090029|FBtr0090021|FBtr0090025|FBtr0090014|FBtr0090028|FBtr0090027|FBtr0090017|FBtr0090024|FBtr0090013|FBtr0090022 12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170 12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744806|12744807|12744807|12744807|12744807|12744807|12744807 GTTAAC 6mer2-7 dme-miR-999-3p 2L + 12744153 12744236 stop_codon MRP FlyBase G3338.1 GGACGCCAATCTAGTTTAAGATCCATGAATGTTAACTTGAAACTCCACGAAACTCAAACGGAAGAGTGAGTGCCCCAAAACAAC 14 12744189 0.992493655 6 13 47 1 1.301029996 0 0.214285714 0.45 14 0 0 20 2L:12744153-12744236 6 5.5 158 FBgn0032456 4513.983333 98.30333333 150.4066667 0.001218436 0.055949273 0.036567528 1 -6 -2.5 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 12744636 12744643 + 2L_12744636_12744643_+ 0.500120318 0.500120318 0.500120318 0 MRP FBtr0090014|FBtr0090013|FBtr0090027|FBtr0090022|FBtr0090024|FBtr0090028|FBtr0090017|FBtr0090026|FBtr0090020|FBtr0090016|FBtr0090021|FBtr0090029|FBtr0090015|FBtr0090023|FBtr0090025|FBtr0090019|FBtr0090018 12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170 12744806|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807 2L + 12744614 12744771 3'utr MRP FlyBase G4271.1 CTTATGTATGCCACATATTTATGTACTTAAATTAACAAATCAGAAGATTGAGATACTACTTAAACTCCCTCAAGAATTTTTGCCTTCAACTGATAAGATCAGTACGAAAAACGGTCAATGTAGTTAAATCAATTTATTGAAACTTTTGTAGATTGTAT 56 12744635 0.854623124 15 52 464 0.935483871 1.462397998 0.064516129 0.107142857 0.193548387 56 3 1 58 2L:12744614-12744771 8 MRP FBtr0090015|FBtr0090023|FBtr0090026|FBtr0090019|FBtr0090018|FBtr0090016|FBtr0090020|FBtr0090029|FBtr0090021|FBtr0090025|FBtr0090014|FBtr0090028|FBtr0090027|FBtr0090017|FBtr0090024|FBtr0090013|FBtr0090022 12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170 12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744806|12744807|12744807|12744807|12744807|12744807|12744807 GTACTTAA 8mer-A1 dme-miR-252-5p 2L + 12744620 12744653 3'utr MRP FlyBase G3341.1 TATGCCACATATTTATGTACTTAAATTAACAAAT 13 12744634 0.690525964 3 12 122 0.888888889 1.204119983 0 0.307692308 0.5 13 2 0 16 2L:12744620-12744653 8 22 159 FBgn0032456 4513.983333 98.30333333 150.4066667 0.004873744 0.223797091 0.146270112 1 2 1.5 0.01 dme-miR-33-5p 6mer2-7 AATGCA 2L 12817079 12817084 - 2L_12817079_12817084_- 1 1 1 0 kek1 FBtr0332210 12816998 12819017 2L - 12817051 12817098 3'utr kek1 FlyBase G10356.1 AAAGGCGGGCATTGAATGCATGAAAGCAACTGAATGAACAACAAAGCA 7 12817085 0.914460605 5 6 20 0.857142857 0.77815125 0 0 0 7 1 0 6 2L:12817051-12817098 6 kek1 FBtr0332210 12816998 12819017 AATGCA 6mer2-7 dme-miR-33-5p 2L - 12817052 12817097 3'utr kek1 FlyBase G8009.1 AAGGCGGGCATTGAATGCATGAAAGCAACTGAATGAACAACAAAGC 6 12817085 0.882899209 3 5 14 0.857142857 0.77815125 0.285714286 0.166666667 0.285714286 6 1 0 6 2L:12817052-12817097 6 4.5 160 FBgn0015399 5185.06 109.4633333 168.6866667 0.000867878 0.041109656 0.026676679 1 1 1 0.01 dme-miR-277-3p 7mer-A1 GCATTTA 2L 12817260 12817266 - 2L_12817260_12817266_- 0.823349562 0.823349562 0.823349562 0 kek1 FBtr0332210 12816998 12819017 2L - 12817247 12817290 3'utr kek1 FlyBase G10358.1 AAAAAAGAGCAAGAAAAAACCGTAGCATTTAAGTTGAACTTATG 6 12817268 0.962192479 3 5 24 0.833333333 0.698970004 0.166666667 0 0 6 1 0 5 2L:12817247-12817290 7 kek1 FBtr0332210 12816998 12819017 GCATTTA 7mer-A1 dme-miR-277-3p 2L - 12817233 12817286 3'utr kek1 FlyBase G8011.1 AAGAGCAAGAAAAAACCGTAGCATTTAAGTTGAACTTATGTATTATGTATTGTA 7 12817265 0.986867539 5 6 56 0.875 0.84509804 0.125 0.142857143 0.25 7 1 0 7 2L:12817233-12817286 7 6 161 FBgn0015399 5185.06 109.4633333 168.6866667 0.001157171 0.054812875 0.035568905 2 -1 0.5 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2L 12817405 12817410 - 2L_12817405_12817410_- 1 1 1 0 kek1 FBtr0332210 12816998 12819017 2L - 12817374 12817433 3'utr kek1 FlyBase G10359.1 AATAATATTTTTAAGGTAAACCAAAGACTTTTTTCTTTGCATCTAAATGAGCGCAGGAGT 76 12817403 0.911117367 11 72 541 0.956989247 1.949390007 0.096774194 0.197368421 0.344086022 76 4 0 89 2L:12817374-12817433 6 kek1 FBtr0332210 12816998 12819017 AAGACT 6mer3-8 dme-miR-14-3p 2L - 12817383 12817432 3'utr kek1 FlyBase G8012.1 ATAATATTTTTAAGGTAAACCAAAGACTTTTTTCTTTGCATCTAAATGAG 44 12817403 0.622138027 5 43 320 0.982758621 1.45484486 0.189655172 0.272727273 0.448275862 44 0 1 57 2L:12817383-12817432 6 58.5 162 FBgn0015399 5185.06 109.4633333 168.6866667 0.011282415 0.534425531 0.346796823 -7 -7 -7 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 12818801 12818807 - 2L_12818801_12818807_- 0.801970437 0.801970437 0.801970437 0 kek1 FBtr0332210|FBtr0332210|FBtr0332210 12816998|12816998|12816998 12819017|12819017|12819017 2L - 12818785 12818864 3'utr kek1 FlyBase G10362.1 CTGATAGATAGCTCCGGGGTCCTAGGCGAGCAGCGATTATTGTGCAAGCGAACTGTTTGTGATAGTGTCTGACAAAAAGA 53 12818809 0.96985266 9 49 356 0.972972973 1.380211242 0.216216216 0.301886792 0.5 53 0 2 72 2L:12818785-12818864 7 kek1 FBtr0332210|FBtr0332210|FBtr0332210 12816998|12816998|12816998 12819017|12819017|12819017 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 12818743 12818843 3'utr kek1 FlyBase G8013.1 CTAGGCGAGCAGCGATTATTGTGCAAGCGAACTGTTTGTGATAGTGTCTGACAAAAAGATAATGCGAATGAAGATAATAATTGCCCAAAGCAAAGAGAAAG 25 12818809 0.97937753 8 21 153 0.928571429 1.591064607 0.095238095 0.48 0.69047619 25 3 0 39 2L:12818743-12818843 7 32.5 163 FBgn0015399 5185.06 109.4633333 168.6866667 0.006268008 0.296903073 0.192664901 2 2 2 0.01 dme-miR-1012-3p 7mer-A1 TGACTAA 2L 12818962 12818968 - 2L_12818962_12818968_- 0.823349562 0.823349562 0.823349562 0 kek1 FBtr0332210 12816998 12819017 2L - 12818935 12819074 stop_codon kek1 FlyBase G10363.1 AGCAGCCGGAATTCGCCGGACGAGGGATACCAGGAAGGATGCGGCACGGATGTGTAAGCGCAGCGCTTCTCGGCGGAAGGAACGGCGAGGAAACCAAACCAAGAACTGACTAAACTTAACACAACTAAACAAGAGATATA 50 12818964 0.870300491 9 48 124 0.967741935 1.477121255 0.096774194 0.18 0.338709677 50 1 1 60 2L:12818935-12819074 7 kek1 FBtr0332210 12816998 12819017 TGACTAA 7mer-A1 dme-miR-1012-3p 2L - 12818939 12819089 stop_codon kek1 FlyBase G8014.1 AGGGCCCTGATCAGCAGCAGCCGGAATTCGCCGGACGAGGGATACCAGGAAGGATGCGGCACGGATGTGTAAGCGCAGCGCTTCTCGGCGGAAGGAACGGCGAGGAAACCAAACCAAGAACTGACTAAACTTAACACAACTAAACAAGAGA 46 12818963 0.858609974 13 44 108 0.942028986 1.210853365 0.173913043 0.391304348 0.594202899 46 1 3 65 2L:12818939-12819089 7 36 164 FBgn0015399 5185.06 109.4633333 168.6866667 0.006943025 0.32887725 0.213413429 -4 -5 -4.5 0.01 dme-miR-277-3p 6mer3-8 TGCATT 2L 12978190 12978195 + 2L_12978190_12978195_+ 1 1 1 0 Vha68-2 FBtr0080420|FBtr0080419|FBtr0336613|FBtr0305551|FBtr0336614|FBtr0080418 12978068|12978068|12978068|12978068|12978068|12978068 12978607|12978607|12978607|12978607|12978607|12978607 2L + 12978169 12978202 3'utr Vha68-2 FlyBase G4282.1 CAAACACCAACAATTCCGTGCTGCATTCGATGAA 6 12978182 0.931333273 2 6 24 1 0.77815125 0.166666667 0 0 6 0 0 6 2L:12978169-12978202 6 Vha68-2 FBtr0305551|FBtr0336613|FBtr0080419|FBtr0080420|FBtr0080418|FBtr0336614 12978068|12978068|12978068|12978068|12978068|12978068 12978607|12978607|12978607|12978607|12978607|12978607 TGCATT 6mer3-8 dme-miR-277-3p 2L + 12978159 12978193 3'utr Vha68-2 FlyBase G3352.1 AAAGCCTAATCAAACACCAACAATTCCGTGCTGCA 5 12978182 0.92564336 2 4 14 1 0.84509804 0.142857143 0.2 0.428571429 5 0 0 7 2L:12978159-12978193 4 5 165 FBgn0263598 3088.803333 152.71 233.77 0.00161875 0.032741798 0.021388544 8 8 8 0.01 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 13001290 13001297 - 2L_13001290_13001297_- 0.63113665 0.63113665 0.63113665 0 Vha68-1 FBtr0080429|FBtr0336618 13000768|13000963 13001411|13001411 2L - 13001280 13001347 3'utr Vha68-1 FlyBase G10383.1 AAACGAAATAAGAAACCAAAGCTAGGTTATTATTCGAATTCCCCATTCAATCTAGTCATATTTACATA 15 13001299 0.990715221 5 13 131 0.866666667 0.812913357 0.133333333 0 0 15 1 1 13 2L:13001280-13001347 8 Vha68-1 FBtr0336618|FBtr0080429 13000963|13000768 13001411|13001411 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 13001260 13001312 3'utr Vha68-1 FlyBase G8028.1 GAATTCCCCATTCAATCTAGTCATATTTACATAATGCATAATAAGATATTTGA 9 13001298 0.993367954 5 7 83 0.75 0.653212514 0.083333333 0.333333333 0.5 9 2 1 9 2L:13001260-13001312 8 10.5 166 FBgn0265262 180.4566667 8.25 12.47 0.058185714 1.272727273 0.84202085 2 1 1.5 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 2L 13012973 13012978 + 2L_13012973_13012978_+ 0.999789034 1 0.999894517 0.0001492 Tor FBtr0080422|FBtr0336615 13012931|13012931 13013197|13013197 2L + 13012918 13013002 stop_codon Tor FlyBase G4303.1 TGTCCGTTTTGGTAGGTCAACCGATCCGGCATAGATCCCGTGCGACAACCGGCAATTGACTGAGCGAGATTACGAACTTACGATT 17 13012973 0.890689766 6 17 58 1 1.255272505 0.388888889 0.058823529 0.111111111 17 0 0 18 2L:13012918-13013002 6 Tor FBtr0080422|FBtr0336615 13012931|13012931 13013197|13013197 TTGACT 6mer3-8 dme-miR-1012-3p 2L + 13012953 13013005 3'utr Tor FlyBase G3361.1 TCCCGTGCGACAACCGGCAATTGACTGAGCGAGATTACGAACTTACGATTACT 14 13012973 0.740099263 4 12 48 0.882352941 0.875061263 0.470588235 0.142857143 0.294117647 14 1 1 15 2L:13012953-13013005 6 12.5 167 FBgn0021796 1145.65 17.29333333 26.52 0.010910837 0.722821897 0.471342383 0 0 0 0.01 dme-miR-307a-3p 6mer2-7 GTTGTG 2L 13013330 13013335 - 2L_13013330_13013335_- 1 1 1 0 CG9934 FBtr0080428 13013274 13013614 2L - 13013304 13013357 3'utr CG9934 FlyBase G10385.1 GAAAAAAACGACACAATACCGAGTTGTGCGGGTAATTTGGTGATTTAAAAAATT 15 13013321 0.981231346 6 14 99 1 1.230448921 0.529411765 0.133333333 0.235294118 15 0 0 17 2L:13013304-13013357 6 CG9934 FBtr0080428 13013274 13013614 GTTGTG 6mer2-7 dme-miR-307a-3p 2L - 13013306 13013335 3'utr CG9934 FlyBase G8029.1 GTTGTGCGGGTAATTTGGTGATTTAAAAAA 9 13013313 0.641283164 4 9 68 1 1.079181246 0.666666667 0.333333333 0.5 9 0 0 12 2L:13013306-13013335 6 8.5 168 FBgn0032467 964.9333333 25.60666667 39.19333333 0.008808899 0.331944806 0.216873618 -14 -22 -18 0.01 dme-miR-252-5p 7mer-m1 TACTTAG 2L 13013580 13013586 - 2L_13013580_13013586_- 0.702971752 0.702971752 0.702971752 0 CG9934 FBtr0080428|FBtr0301247 13013274|13013386 13013614|13013614 2L - 13013544 13013606 3'utr CG9934 FlyBase G10387.1 CCCTTTAACCCATACTGCTATACTTAGGACTAGTTTAATGTGCAGTTTTAGTGTCTACCTATC 11 13013583 0.98895868 8 10 92 0.928571429 1.113943352 0.071428571 0.181818182 0.357142857 11 1 0 13 2L:13013544-13013606 7 CG9934 FBtr0080428 13013274 13013614 TACTTAG 7mer-m1 dme-miR-252-5p 2L - 13013541 13013605 3'utr CG9934 FlyBase G8030.1 CCTTTAACCCATACTGCTATACTTAGGACTAGTTTAATGTGCAGTTTTAGTGTCTACCTATCTTC 7 13013594 0.989740106 5 6 61 0.923076923 1.079181246 0 0.571428571 0.769230769 7 1 0 12 2L:13013541-13013605 7 6.5 169 FBgn0032467 964.9333333 25.60666667 39.19333333 0.006736217 0.253840146 0.165844531 -3 8 2.5 0.01 dme-miR-33-5p 7mer-A1 AATGCAA 2L 13022236 13022242 - 2L_13022236_13022242_- 0.782911824 0.782911824 0.782911824 0 CG9932 FBtr0310277|FBtr0336617 13021866|13021866 13023322|13023322 2L - 13022194 13022421 3'utr CG9932 FlyBase G10413.1 TTAGTTTCTACTACGGATTAGTTATGTTCTCATCATTAGTGCGAATGTTTTCCAGCAAACGGCGTCTTTGTAGCACAGTGTAGGCGTTAACACTACAAACAAAATGTTATCATTAAACTATAAGCAAACAAAAAGAACACATGTGGAATAGCGGGGCCATATTTAAATAGTTTAAACTTAATGCAAGGAAACATTTGAAAACAAAGCAAATCAAAACCAGAAGATATA 81 13022240 0.974564496 24 79 486 0.966292135 1.934498451 0.056179775 0.098765432 0.179775281 81 3 0 86 2L:13022194-13022421 7 CG9932 FBtr0336617|FBtr0310277 13021866|13021866 13023322|13023322 AATGCAA 7mer-A1 dme-miR-33-5p 2L - 13022224 13022292 3'utr CG9932 FlyBase G8052.1 AAAAAGAACACATGTGGAATAGCGGGGCCATATTTAAATAGTTTAAACTTAATGCAAGGAAACATTTGA 43 13022240 0.962165106 6 41 209 0.966666667 1.763427994 0.016666667 0.255813953 0.466666667 43 2 0 58 2L:13022224-13022292 7 43.5 170 FBgn0262160 822.2633333 11.45 17.61 0.05290276 3.799126638 2.470187394 -2 -2 -2 0.01 dme-miR-92b-3p 6mer2-7 TGCAAT 2L 13022627 13022632 - 2L_13022627_13022632_- 1 1 1 0 CG9932 FBtr0310277|FBtr0336617 13021866|13021866 13023322|13023322 2L - 13022604 13022654 3'utr CG9932 FlyBase G10414.1 AAGAAAGTGAGCGCGTATATCATGCAATGAATATGGTACTATATACATACT 24 13022636 0.66228318 6 23 124 0.965517241 1.447158031 0.344827586 0.166666667 0.310344828 24 1 0 28 2L:13022604-13022654 6 CG9932 FBtr0336617|FBtr0310277 13021866|13021866 13023322|13023322 TGCAAT 6mer2-7 dme-miR-92b-3p 2L - 13022601 13022652 3'utr CG9932 FlyBase G8054.1 GAAAGTGAGCGCGTATATCATGCAATGAATATGGTACTATATACATACTATA 19 13022635 0.979678543 6 15 106 0.740740741 1.301029996 0.481481481 0.315789474 0.518518519 19 7 0 20 2L:13022601-13022652 6 20.5 171 FBgn0262160 822.2633333 11.45 17.61 0.024931186 1.790393013 1.1641113 4 3 3.5 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 2L 13022756 13022761 - 2L_13022756_13022761_- 1 1 1 0 CG9932 FBtr0310277|FBtr0336616|FBtr0089956|FBtr0336617 13021866|13022669|13022669|13021866 13023322|13023322|13023322|13023322 2L - 13022729 13022801 3'utr CG9932 FlyBase G10416.1 AGATCCAAAAGCGTTTCAAGGAAATCAACTTTGTACAGGAGAAAAAGAGATAAATTCAAAATTATGTCTTGCT 41 13022751 0.931965765 8 38 192 0.955555556 1.633468456 0.155555556 0.097560976 0.177777778 41 2 0 43 2L:13022729-13022801 6 CG9932 FBtr0089956|FBtr0336617|FBtr0310277|FBtr0336616 13022669|13021866|13021866|13022669 13023322|13023322|13023322|13023322 GAAAAA 6mer3-8 dme-miR-980-5p 2L - 13022736 13022769 3'utr CG9932 FlyBase G8056.1 GTACAGGAGAAAAAGAGATAAATTCAAAATTATG 17 13022751 0.915378272 4 16 65 0.96 1.079181246 0.2 0.352941176 0.56 17 0 1 24 2L:13022736-13022769 6 25 172 FBgn0262160 822.2633333 11.45 17.61 0.030403885 2.183406114 1.419647927 -10 -10 -10 0.01 dme-miR-277-3p 6mer2-7 GCATTT 2L 13022876 13022881 - 2L_13022876_13022881_- 1 1 1 0 CG9932 FBtr0310277|FBtr0336616|FBtr0089956|FBtr0336617 13021866|13022669|13022669|13021866 13023322|13023322|13023322|13023322 2L - 13022865 13022997 3'utr CG9932 FlyBase G10417.1 CGAATACTTTGCAAATGGGATAAGCCGGAATTCTTAATGTAATTACTTGCTAGAACGGTGCAAAATGTAATTTAAACTAATCGTATTGTAACTTATCAAAGAGATAACTATAGAAGGCATTTTAATATAGAAC 32 13022876 0.967776255 15 29 202 0.891891892 1.041392685 0.108108108 0.15625 0.27027027 32 2 2 33 2L:13022865-13022997 6 CG9932 FBtr0089956|FBtr0336617|FBtr0310277|FBtr0336616 13022669|13021866|13021866|13022669 13023322|13023322|13023322|13023322 GCATTT 6mer2-7 dme-miR-277-3p 2L - 13022865 13022949 3'utr CG9932 FlyBase G8057.1 GCTAGAACGGTGCAAAATGTAATTTAAACTAATCGTATTGTAACTTATCAAAGAGATAACTATAGAAGGCATTTTAATATAGAAC 13 13022877 0.967949889 7 13 76 1 1.230448921 0.294117647 0.307692308 0.470588235 13 0 0 17 2L:13022865-13022949 6 7 173 FBgn0262160 822.2633333 11.45 17.61 0.008513088 0.611353712 0.39750142 -5 -4 -4.5 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT 2L 13023079 13023084 - 2L_13023079_13023084_- 1 1 1 0 CG9932 FBtr0310277|FBtr0336616|FBtr0089956|FBtr0336617 13021866|13022669|13022669|13021866 13023322|13023322|13023322|13023322 2L - 13023048 13023102 3'utr CG9932 FlyBase G10418.1 CACACCTAGTTGGAACATGTTCCTGCACTTTTACGTTTTTTCTAGAACCTAAGGT 21 13023085 0.975201836 5 19 162 0.916666667 1.342422681 0.125 0.142857143 0.25 21 2 0 22 2L:13023048-13023102 6 CG9932 FBtr0089956|FBtr0336617|FBtr0310277|FBtr0336616 13022669|13021866|13021866|13022669 13023322|13023322|13023322|13023322 GTTCCT 6mer2-7 dme-miR-276a-3p 2L - 13023048 13023104 3'utr CG9932 FlyBase G8058.1 TACACACCTAGTTGGAACATGTTCCTGCACTTTTACGTTTTTTCTAGAACCTAAGGT 8 13023085 0.979996243 3 7 64 0.916666667 1.041392685 0 0.375 0.583333333 8 1 0 11 2L:13023048-13023104 6 13.5 174 FBgn0262160 822.2633333 11.45 17.61 0.016418098 1.179039301 0.766609881 1 1 1 0.01 dme-miR-282-5p 6mer2-7 GAGGCT 2L 13168888 13168893 + 2L_13168888_13168893_+ 0.999999999 0.999999156 0.999999578 5.66E-07 Sir2 FBtr0080434 13168640 13169551 2L + 13168864 13168964 3'utr Sir2 FlyBase G4323.1 CGGATCCACTAGTTTACTCAATTCGAGGCTTTAGAGATCTGACCCTCGTTGCTTTACCACCAACCCCTTATGCCCAATCCCGTTTTGATATTTTTGAAAAA 49 13168894 0.981189427 15 47 343 0.95 1.45484486 0.216666667 0.224489796 0.366666667 49 2 1 57 2L:13168864-13168964 6 Sir2 FBtr0080434 13168640 13169551 GAGGCT 6mer2-7 dme-miR-282-5p 2L + 13168843 13168956 3'utr Sir2 FlyBase G3368.1 GAAGTTTTCAAGAAATGAAACCGGATCCACTAGTTTACTCAATTCGAGGCTTTAGAGATCTGACCCTCGTTGCTTTACCACCAACCCCTTATGCCCAATCCCGTTTTGATATTT 35 13168894 0.974111332 15 35 214 1 1.672097858 0.340425532 0.257142857 0.446808511 35 0 0 47 2L:13168843-13168956 6 29.5 175 FBgn0024291 729.5333333 23.15666667 35.49 0.040436809 1.273931193 0.831220062 -6 -6 -6 0.01 dme-miR-8-3p 6mer2-7 AGTATT 2L 13169017 13169022 + 2L_13169017_13169022_+ 1 0.999279997 0.999639999 0.000509117 Sir2 FBtr0080434 13168640 13169551 2L + 13169002 13169057 3'utr Sir2 FlyBase G4324.1 AACGCTGTAAATGTTAGTATTTTATTATATTAAGTTGTTATTGAGGCCTTTTTAGA 16 13169043 0.845895814 6 16 190 1 1.301029996 0.15 0.1875 0.35 16 0 0 20 2L:13169002-13169057 6 Sir2 FBtr0080434 13168640 13169551 AGTATT 6mer2-7 dme-miR-8-3p 2L + 13168971 13169057 3'utr Sir2 FlyBase G3369.1 GTTTATTTATTATCTCTCTTTTTCAAAACGAAACGCTGTAAATGTTAGTATTTTATTATATTAAGTTGTTATTGAGGCCTTTTTAGA 13 13169043 0.989256709 7 13 132 1 1.301029996 0.05 0.307692308 0.55 13 0 0 20 2L:13168971-13169057 6 6.5 176 FBgn0024291 729.5333333 23.15666667 35.49 0.008909805 0.280696704 0.183150183 -26 -26 -26 0.01 dme-miR-33-5p 7mer-A1 AATGCAA 2L 13169181 13169187 + 2L_13169181_13169187_+ 0.782911824 0.782911824 0.782911824 0 Sir2 FBtr0080434 13168640 13169551 2L + 13169160 13169277 3'utr Sir2 FlyBase G4325.1 TAACATATTCAAAACTATGCAAATGCAAACGGAAAAATACGTTAGTTTTAGTTAAAAACTAGACACAAACACTCTGTATATAAGCACTCGCCCCTAATTTGTATTGTACATGATTCTT 16 13169177 0.979437784 10 16 112 1 1.255272505 0.333333333 0.125 0.222222222 16 0 0 18 2L:13169160-13169277 7 Sir2 FBtr0080434 13168640 13169551 AATGCAA 7mer-A1 dme-miR-33-5p 2L + 13169143 13169211 3'utr Sir2 FlyBase G3371.1 AAATCTAGTTCTAAGCGTAACATATTCAAAACTATGCAAATGCAAACGGAAAAATACGTTAGTTTTAGT 12 13169177 0.931831143 5 12 51 1 1.278753601 0.473684211 0.5 0.684210526 12 0 0 19 2L:13169143-13169211 7 9 177 FBgn0024291 729.5333333 23.15666667 35.49 0.012336654 0.388656974 0.253592561 4 4 4 0.01 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA 2L 13169746 13169753 - 2L_13169746_13169753_- 0.627007348 0.627007348 0.627007348 0 Sfmbt FBtr0080491|FBtr0333236|FBtr0289981|FBtr0080492 13169647|13169647|13169647|13169647 13170451|13170451|13170451|13170451 2L - 13169728 13169806 3'utr Sfmbt FlyBase G10449.1 TTCCGGTGTCACACATCTCTGCAAGGAGGGCATTATTGGTGTAAGGCAAACTTTTGAAGAAGGCAACCTTAATGATAAA 24 13169754 0.852733185 6 24 116 1 1.491361694 0.193548387 0.25 0.419354839 24 0 0 31 2L:13169728-13169806 8 Sfmbt FBtr0080492|FBtr0289981|FBtr0333236|FBtr0080491 13169647|13169647|13169647|13169647 13170451|13170451|13170451|13170451 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p 2L - 13169728 13169809 3'utr Sfmbt FlyBase G8077.1 TCGTTCCGGTGTCACACATCTCTGCAAGGAGGGCATTATTGGTGTAAGGCAAACTTTTGAAGAAGGCAACCTTAATGATAAA 27 13169754 0.911199588 6 25 146 0.973684211 1.568201724 0.236842105 0.333333333 0.526315789 27 1 0 37 2L:13169728-13169809 8 10 178 FBgn0032475 1744.74 46.46666667 71.1 0.005731513 0.215208034 0.140646976 1 1 1 0.01 dme-miR-980-3p 6mer3-8 GGCAGC 2L 13169905 13169910 - 2L_13169905_13169910_- 1 1 1 0 Sfmbt FBtr0080491|FBtr0333236|FBtr0289981|FBtr0080492 13169647|13169647|13169647|13169647 13170451|13170451|13170451|13170451 2L - 13169873 13169929 3'utr Sfmbt FlyBase G10450.1 AGCGCAAGCAAATAACCCAGGCAGCATGCCCTCAACTTTCAGTCGTAAACGGAGCGA 23 13169903 0.898305652 4 23 65 1 1.447158031 0.035714286 0.217391304 0.357142857 23 0 0 28 2L:13169873-13169929 6 Sfmbt FBtr0080492|FBtr0289981|FBtr0333236|FBtr0080491 13169647|13169647|13169647|13169647 13170451|13170451|13170451|13170451 GGCAGC 6mer3-8 dme-miR-980-3p 2L - 13169869 13169945 3'utr Sfmbt FlyBase G8078.1 ATTTTATATAGAAGCAAGCGCAAGCAAATAACCCAGGCAGCATGCCCTCAACTTTCAGTCGTAAACGGAGCGATTGG 14 13169903 0.982518449 4 14 46 1 1.278753601 0.105263158 0.357142857 0.526315789 14 0 0 19 2L:13169869-13169945 6 15 179 FBgn0032475 1744.74 46.46666667 71.1 0.00859727 0.322812052 0.210970464 -7 -7 -7 0.01 dme-miR-283-5p 8mer-A1 TGATATTA 2L 13178947 13178954 + 2L_13178947_13178954_+ 0.592192292 0.592192292 0.592192292 0 CG5439 FBtr0080435 13178812 13178978 2L + 13178876 13178970 3'utr CG5439 FlyBase G4333.1 TTTATCTATTTCGTTGTAGATATCTTTATCTATATGTGTAATAACGGAGTTGGTCCAAGTGTTGTAATCATTGATATTAAATAAAGTTAAGCCTT 51 13178946 0.986672498 8 51 490 1 1.740362689 0.090909091 0.058823529 0.127272727 51 0 0 55 2L:13178876-13178970 8 CG5439 FBtr0080435 13178812 13178978 TGATATTA 8mer-A1 dme-miR-283-5p 2L + 13178901 13178969 3'utr CG5439 FlyBase G3378.1 TTATCTATATGTGTAATAACGGAGTTGGTCCAAGTGTTGTAATCATTGATATTAAATAAAGTTAAGCCT 33 13178946 0.989590839 5 32 311 0.980769231 1.707570176 0.019230769 0.424242424 0.634615385 33 1 0 51 2L:13178901-13178969 8 37.5 180 FBgn0032476 436.6666667 29.4 45.33 0.085877863 1.275510204 0.827266711 1 1 1 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 2L 13180601 13180606 - 2L_13180601_13180606_- 0.999833819 0.928104042 0.963968931 0.050720628 CG31849 FBtr0080490 13180396 13180988 2L - 13180576 13180623 3'utr CG31849 FlyBase G10470.1 ACACACACGATCTGTATGAAAAAGCTTTTTAGACTTACTTTAAATATT 27 13180594 0.715521735 6 26 198 0.970588235 1.51851394 0.029411765 0.222222222 0.382352941 27 1 0 33 2L:13180576-13180623 6 CG31849 FBtr0080490 13180396 13180988 GAAAAA 6mer3-8 dme-miR-980-5p 2L - 13180585 13180629 3'utr CG31849 FlyBase G8087.1 GACATAACACACACGATCTGTATGAAAAAGCTTTTTAGACTTACT 15 13180594 0.773014934 4 15 102 1 1.414973348 0.269230769 0.533333333 0.730769231 15 0 0 26 2L:13180585-13180629 6 20.5 181 FBgn0051849 77.33333333 4.373333333 6.81 0.265086207 4.6875 3.010279001 -12 -12 -12 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 13180752 13180759 - 2L_13180752_13180759_- 0.650171355 0.650171355 0.650171355 0 CG31849 FBtr0080490|FBtr0080490|FBtr0080490 13180396|13180396|13180396 13180988|13180988|13180988 2L - 13180720 13180786 3'utr CG31849 FlyBase G10472.1 AGCAGACAGGACAGACAGACCCGCCATCTGTGATAAGAAAAACCAGAACTAAACAATGAATTTATGA 48 13180760 0.95162593 4 46 143 0.947368421 1.73239376 0.157894737 0.145833333 0.280701754 48 3 0 54 2L:13180720-13180786 8 CG31849 FBtr0080490|FBtr0080490|FBtr0080490 13180396|13180396|13180396 13180988|13180988|13180988 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 13180746 13180783 3'utr CG31849 FlyBase G8088.1 AGACAGGACAGACAGACCCGCCATCTGTGATAAGAAAA 32 13180760 0.959104993 2 32 96 1 1.602059991 0.175 0.21875 0.375 32 0 0 40 2L:13180746-13180783 8 39 182 FBgn0051849 77.33333333 4.373333333 6.81 0.504310345 8.917682927 5.726872247 1 1 1 0.01 dme-bantam-3p 7mer-m8 TGATCTC 2L 13183895 13183901 - 2L_13183895_13183901_- 0.661615243 0.661615243 0.661615243 0 CG16974 FBtr0305555 13183847 13185416 2L - 13183856 13183930 3'utr CG16974 FlyBase G10475.1 GGCGACCCTTCCTGTAGTTCCCATCATACTGATCTCCGTTGGGCAGGATGGCCCAACCTCTACCTTGTCTCTGTC 32 13183901 0.999830633 7 30 220 0.973684211 1.267171728 0.078947368 0.15625 0.289473684 32 0 1 37 2L:13183856-13183930 7 CG16974 FBtr0305555 13183847 13185416 TGATCTC 7mer-m8 dme-bantam-3p 2L - 13183858 13183916 3'utr CG16974 FlyBase G8089.1 TAGTTCCCATCATACTGATCTCCGTTGGGCAGGATGGCCCAACCTCTACCTTGTCTCTG 20 13183901 0.985176194 7 18 147 0.857142857 1.380211242 0.178571429 0.3 0.5 20 4 0 24 2L:13183858-13183916 7 24 183 FBgn0032479 2807.686667 76.92 117.31 0.008547962 0.31201248 0.204586139 0 0 0 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2L 13185071 13185077 - 2L_13185071_13185077_- 0.521223855 0.521223855 0.521223855 0 CG16974 FBtr0305555|FBtr0080489 13183847|13184945 13185416|13185416 2L - 13185059 13185097 3'utr CG16974 FlyBase G10477.1 TGAAAAGAGAGCCCCCCATTTGTGATTTCATTACTTAAC 15 13185078 0.981420804 4 15 110 1 1.361727836 0.304347826 0.333333333 0.565217391 15 0 0 23 2L:13185059-13185097 7 CG16974 FBtr0080489|FBtr0305555 13184945|13183847 13185416|13185416 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 13185065 13185093 3'utr CG16974 FlyBase G8090.1 AAGAGAGCCCCCCATTTGTGATTTCATTA 11 13185072 0.972060849 4 11 68 1 1.230448921 0.176470588 0.272727273 0.529411765 11 0 0 17 2L:13185065-13185093 7 13 184 FBgn0032479 2807.686667 76.92 117.31 0.004630146 0.16900676 0.110817492 1 -5 -2 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 2L 13196492 13196498 + 2L_13196492_13196498_+ 0.620204266 0.620204266 0.620204266 0 Edem2 FBtr0080438|FBtr0333235 13196270|13196270 13197281|13197281 2L + 13196457 13196539 3'utr Edem2 FlyBase G4347.1 ATGCCACGAGTTATGGAACTCAGTTTAGGGATCTTTGCATTTCGTGGTTGGTTCTCAGGCAGGCAATTGGCTTCCTAGTGGCT 20 13196491 0.989274348 8 18 169 0.92 1.361727836 0.4 0.2 0.36 20 2 0 23 2L:13196457-13196539 7 Edem2 FBtr0333235|FBtr0080438 13196270|13196270 13197281|13197281 TGCATTT 7mer-m8 dme-miR-277-3p 2L + 13196382 13196540 3'utr Edem2 FlyBase G3385.1 GTAACGTGTGTACAGTAAGCGAACGTAACTAAATTGGAATTTCCTGTACTTTACTAGACATGTAAGAGCGATTTAATGCCACGAGTTATGGAACTCAGTTTAGGGATCTTTGCATTTCGTGGTTGGTTCTCAGGCAGGCAATTGGCTTCCTAGTGGCTA 43 13196491 0.988508391 18 40 372 0.9375 1.77815125 0.4375 0.348837209 0.5625 43 4 0 60 2L:13196382-13196540 7 17.5 185 FBgn0032480 836.01 24.70333333 37.89 0.020932764 0.708406423 0.461863288 1 1 1 0.01 dme-miR-980-5p 7mer-m1 AAAAACT 2L 13196653 13196659 + 2L_13196653_13196659_+ 0.765586663 0.765586663 0.765586663 0 Edem2 FBtr0080438|FBtr0333235 13196270|13196270 13197281|13197281 2L + 13196627 13196712 3'utr Edem2 FlyBase G4348.1 TTGATGTAAGTAAAACTTCTGTATATAAAAACTTAGAACTTAGAGACTAACAAAATCGTAAATAATGATTAGTTTTAAGAAGTTAG 11 13196667 0.976328453 7 11 69 1 1.041392685 0.363636364 0 0 11 0 0 11 2L:13196627-13196712 7 Edem2 FBtr0333235|FBtr0080438 13196270|13196270 13197281|13197281 AAAAACT 7mer-m1 dme-miR-980-5p 2L + 13196653 13196686 3'utr Edem2 FlyBase G3386.1 AAAAACTTAGAACTTAGAGACTAACAAAATCGTA 6 13196666 0.934437705 4 6 25 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 2L:13196653-13196686 6 5 186 FBgn0032480 836.01 24.70333333 37.89 0.00598079 0.202401835 0.13196094 -14 -13 -13.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 13197053 13197058 + 2L_13197053_13197058_+ 0.999998706 1 0.999999353 9.19E-07 Edem2 FBtr0080438|FBtr0080438|FBtr0080438|FBtr0333235|FBtr0333235|FBtr0333235 13196270|13196270|13196270|13196270|13196270|13196270 13197281|13197281|13197281|13197281|13197281|13197281 2L + 13197035 13197073 3'utr Edem2 FlyBase G4351.1 TTGTGGATGACAACATATCTGTGAATCGACTAGATGCAA 15 13197052 0.700675943 3 14 93 1 1.230448921 0.235294118 0.133333333 0.235294118 15 0 0 17 2L:13197035-13197073 6 Edem2 FBtr0333235|FBtr0333235|FBtr0333235|FBtr0080438|FBtr0080438|FBtr0080438 13196270|13196270|13196270|13196270|13196270|13196270 13197281|13197281|13197281|13197281|13197281|13197281 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 13197036 13197066 3'utr Edem2 FlyBase G3387.1 TGTGGATGACAACATATCTGTGAATCGACTA 6 13197052 0.707589229 2 4 34 0.857142857 0.77815125 0.142857143 0.166666667 0.285714286 6 1 0 6 2L:13197036-13197066 6 10.5 187 FBgn0032480 836.01 24.70333333 37.89 0.012559658 0.425043854 0.277117973 1 1 1 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 2L 13197438 13197443 - 2L_13197438_13197443_- 1 1 1 0 CG16972 FBtr0080488 13197100 13197555 2L - 13197358 13197474 3'utr CG16972 FlyBase G10502.1 TTGAATATCACCCAGAATACCCGATCTATAAATGTGCTTTTGGCTGTCTGCCCAAGTATAGTTCAAATATAGGAAACTATAATAAGTTGCGTGTTAAGCCCTGTAGTCCTAACAATC 25 13197457 0.925816835 11 22 158 0.896551724 1.414973348 0.275862069 0.16 0.275862069 25 3 0 26 2L:13197358-13197474 6 CG16972 FBtr0080488 13197100 13197555 ATGTGC 6mer3-8 dme-miR-305-3p 2L - 13197391 13197469 3'utr CG16972 FlyBase G8104.1 TATCACCCAGAATACCCGATCTATAAATGTGCTTTTGGCTGTCTGCCCAAGTATAGTTCAAATATAGGAAACTATAATA 16 13197416 0.858847894 7 15 103 0.952380952 1.301029996 0 0.3125 0.476190476 16 1 0 20 2L:13197391-13197469 6 7.5 188 FBgn0032481 619.7033333 12.68666667 19.43 0.012102565 0.591171834 0.386001029 14 -27 -6.5 0.01 dme-miR-283-5p 6mer3-8 TGATAT 2L 13210453 13210458 + 2L_13210453_13210458_+ 1 1 1 0 Pect FBtr0334752|FBtr0080440|FBtr0080439|FBtr0080441 13210227|13210227|13210227|13210227 13210828|13210828|13210828|13210828 2L + 13210313 13210469 3'utr Pect FlyBase G4365.2 TCTTGTTTAGTATGTCGTCCCCTGATGATGGCGCTTTAATTTTTTGTTGCGTAAAAAGCGAAGCGACGCTGCCTGAGGATTCAGCGCACCGCTCTCTCGATTTCTAGTACAATTTTAGAATATCTGCACATGCGCCTTAATGATATAAGGTTATACA 604 13210443 0.937495122 37 580 4894 0.962264151 2.122543524 0.256894049 0.120860927 0.229317852 604 22 4 663 2L:13210313-13210469 6 Pect FBtr0334752|FBtr0080440|FBtr0080439|FBtr0080441 13210227|13210227|13210227|13210227 13210828|13210828|13210828|13210828 TGATAT 6mer3-8 dme-miR-283-5p 2L + 13210317 13210468 3'utr Pect FlyBase G3401.1 GTTTAGTATGTCGTCCCCTGATGATGGCGCTTTAATTTTTTGTTGCGTAAAAAGCGAAGCGACGCTGCCTGAGGATTCAGCGCACCGCTCTCTCGATTTCTAGTACAATTTTAGAATATCTGCACATGCGCCTTAATGATATAAGGTTATAC 404 13210443 0.927744805 29 390 3153 0.964227642 2.295933439 0.247154472 0.391089109 0.6 404 20 2 593 2L:13210317-13210468 6 322 189 FBgn0032482 3914.103333 217.82 333.33 0.082266607 1.478284822 0.96600966 10 10 10 0.01 dme-miR-33-5p 6mer2-7 AATGCA 2L 13210742 13210747 + 2L_13210742_13210747_+ 1 1 1 0 Pect FBtr0334752|FBtr0080440|FBtr0080439|FBtr0080441 13210227|13210227|13210227|13210227 13210828|13210828|13210828|13210828 2L + 13210491 13210762 3'utr Pect FlyBase G4366.1 CATTAACGTAGAATATTTAAAATCTAAATTTTATGTATGTAAGCTCAAAATTTGTAAATTCCCTTTAAAGTACGATGTAAGTGTGAGGAACAACAAAATTGTACGAATAGCATGTTATCCAAACTGTTGCCGAATTGAAAAGCCTTGTACGACTTGTATGTATATATATTCAGCAACGGAAGTAGGATGCCTGGATCAGGAAGTAGCTGCTTTTATCAAATGTAATCTCTGATACTTTGTCCTAATTTATTAATGCATATAGTAAGTGCGAG 211 13210712 0.985450504 44 201 1685 0.964980545 1.792391689 0.151750973 0.194312796 0.338521401 211 6 3 248 2L:13210491-13210762 6 Pect FBtr0334752|FBtr0080440|FBtr0080439|FBtr0080441 13210227|13210227|13210227|13210227 13210828|13210828|13210828|13210828 AATGCA 6mer2-7 dme-miR-33-5p 2L + 13210540 13210753 3'utr Pect FlyBase G3403.1 ATTTGTAAATTCCCTTTAAAGTACGATGTAAGTGTGAGGAACAACAAAATTGTACGAATAGCATGTTATCCAAACTGTTGCCGAATTGAAAAGCCTTGTACGACTTGTATGTATATATATTCAGCAACGGAAGTAGGATGCCTGGATCAGGAAGTAGCTGCTTTTATCAAATGTAATCTCTGATACTTTGTCCTAATTTATTAATGCATATAGT 132 13210712 0.938776599 37 117 1063 0.892655367 1.596597096 0.124293785 0.28030303 0.463276836 132 16 3 158 2L:13210540-13210753 6 5.5 190 FBgn0032482 3914.103333 217.82 333.33 0.001405175 0.025250207 0.016500165 30 30 30 0.01 dme-bantam-3p 6mer2-7 GATCTC 2L 13289481 13289486 + 2L_13289481_13289486_+ 1 1 1 0 Uvrag FBtr0080460|FBtr0334865 13289289|13289289 13289556|13289556 2L + 13289438 13289492 3'utr Uvrag FlyBase G4386.1 TGAACGGTAGTCCATTGCGATAATATTATTTTTAGTTGTTTAAGATCTCTGTGTA 19 13289487 0.991711212 6 19 200 1 1.414973348 0.730769231 0.210526316 0.423076923 19 0 0 26 2L:13289438-13289492 6 Uvrag FBtr0334865|FBtr0080460 13289289|13289289 13289556|13289556 GATCTC 6mer2-7 dme-bantam-3p 2L + 13289437 13289499 3'utr Uvrag FlyBase G3415.1 GTGAACGGTAGTCCATTGCGATAATATTATTTTTAGTTGTTTAAGATCTCTGTGTAAATTCCC 21 13289487 0.992520929 7 21 236 1 1.414973348 0.576923077 0.238095238 0.384615385 21 0 0 26 2L:13289437-13289499 6 18 191 FBgn0032499 266.2566667 13.1 20.21333333 0.067603941 1.374045802 0.890501319 -6 -6 -6 0.01 dme-miR-1012-3p 6mer2-7 TGACTA 2L 13301106 13301111 + 2L_13301106_13301111_+ 1 1 1 0 CG31729 FBtr0080462|FBtr0344140|FBtr0080461|FBtr0344851 13301064|13301064|13301064|13301064 13301668|13301668|13301516|13301516 2L + 13301050 13301119 stop_codon CG31729 FlyBase G4407.1 CTTGAAGCTCTCTTAGATGGCGGCCTGGCAAATGAAATACAAATTACACATTATCCTGACTATAATTTCC 33 13301100 0.943179603 11 32 204 0.975609756 1.602059991 0.024390244 0.212121212 0.365853659 33 1 0 40 2L:13301050-13301119 6 CG31729 FBtr0344851|FBtr0080461|FBtr0344140|FBtr0080462 13301064|13301064|13301064|13301064 13301516|13301516|13301668|13301668 TGACTA 6mer2-7 dme-miR-1012-3p 2L + 13301088 13301122 3'utr CG31729 FlyBase G3429.2 ACAAATTACACATTATCCTGACTATAATTTCCATT 16 13301100 0.755958543 2 13 111 0.782608696 1.255272505 0 0.3125 0.52173913 16 5 0 18 2L:13301088-13301122 6 18 192 FBgn0051729 1443.476667 38.43 58.66333333 0.012469893 0.468384075 0.306835616 6 6 6 0.01 dme-miR-283-5p 6mer3-8 TGATAT 2L 13301247 13301252 + 2L_13301247_13301252_+ 1 1 1 0 CG31729 FBtr0080462|FBtr0344140|FBtr0080461|FBtr0344851 13301064|13301064|13301064|13301064 13301668|13301668|13301516|13301516 2L + 13301201 13301303 3'utr CG31729 FlyBase G4409.1 AACTATTCTTTGTTTTGCCAATACCCGCACCAATCCCAAATATACGTGATATCAGGTTAAACTCCCCATCTTCGACACTACACTTTTCACTATGGTATTTTTG 91 13301242 0.886068369 16 86 597 0.953271028 2.008600172 0.102803738 0.142857143 0.271028037 91 5 0 102 2L:13301201-13301303 6 CG31729 FBtr0344851|FBtr0080461|FBtr0344140|FBtr0080462 13301064|13301064|13301064|13301064 13301516|13301516|13301668|13301668 TGATAT 6mer3-8 dme-miR-283-5p 2L + 13301152 13301291 3'utr CG31729 FlyBase G3430.1 GTTATTTACCACTTGATGAGTTGTTCTTTGAACTTGGCAACCATCCCACAACTATTCTTTGTTTTGCCAATACCCGCACCAATCCCAAATATACGTGATATCAGGTTAAACTCCCCATCTTCGACACTACACTTTTCACT 66 13301242 0.986498323 14 58 499 0.901098901 1.311753861 0.164835165 0.272727273 0.472527473 66 6 3 82 2L:13301152-13301291 6 58.5 193 FBgn0051729 1443.476667 38.43 58.66333333 0.040527153 1.522248244 0.997215751 5 5 5 0.01 dme-miR-277-3p 6mer3-8 TGCATT 2L 13301606 13301611 + 2L_13301606_13301611_+ 1 1 1 0 CG31729 FBtr0080462|FBtr0344140 13301064|13301064 13301668|13301668 2L + 13301505 13301634 3'utr CG31729 FlyBase G4412.1 AATGATAATTGTAACTATGACTAATAATGAAATCAATTACCATGGTATAAGAATTAAAATGTAAAACAAAAAATATAGATTTTGTATAAGGATTTAGAAATTGCATTGCATTGTGTAATAATAATAATAA 29 13301598 0.988315634 14 28 251 0.941176471 1.505149978 0.294117647 0.137931034 0.264705882 29 2 0 32 2L:13301505-13301634 6 CG31729 FBtr0344140|FBtr0080462 13301064|13301064 13301668|13301668 TGCATT 6mer3-8 dme-miR-277-3p 2L + 13301576 13301629 3'utr CG31729 FlyBase G3434.1 AATATAGATTTTGTATAAGGATTTAGAAATTGCATTGCATTGTGTAATAATAAT 13 13301598 0.800716386 4 13 117 1 1.176091259 0.333333333 0.153846154 0.266666667 13 0 0 15 2L:13301576-13301629 6 8.5 194 FBgn0051729 1443.476667 38.43 58.66333333 0.005888561 0.221181369 0.144894596 8 8 8 0.01 dme-miR-2a-2-5p 8mer-A1 TGATGAGA 2L 13376051 13376058 + 2L_13376051_13376058_+ 0.601217767 0.601217767 0.601217767 0 CG6565 FBtr0080468|FBtr0346420|FBtr0342631 13375839|13375839|13375839 13376165|13376404|13376165 2L + 13375998 13376072 3'utr CG6565 FlyBase G4433.1 TCAGAGCAAGTGTGCAATAGGTGGAAGTTTTGCTCTTAACATGAGTGCCACTTTGATGAGAAACTTAAAAATAAA 9 13376050 0.976265819 6 8 49 0.888888889 0.903089987 0.111111111 0 0 9 1 0 8 2L:13375998-13376072 8 CG6565 FBtr0342631|FBtr0080468|FBtr0346420 13375839|13375839|13375839 13376165|13376165|13376404 TGATGAGA 8mer-A1 dme-miR-2a-2-5p 2L + 13376016 13376062 3'utr CG6565 FlyBase G3445.1 AGGTGGAAGTTTTGCTCTTAACATGAGTGCCACTTTGATGAGAAACT 8 13376050 0.978307487 4 7 48 1 1.113943352 0 0.5 0.692307692 8 0 0 13 2L:13376016-13376062 8 6 195 FBgn0032513 608.7166667 34.34 52.78 0.009856803 0.174723355 0.113679424 1 1 1 0.01 dme-miR-317-5p 6mer2-7 TATCCC 2L 13376490 13376495 - 2L_13376490_13376495_- 1 1 1 0 CG9302 FBtr0080470 13376453 13376712 2L - 13376482 13376515 3'utr CG9302 FlyBase G10581.1 AATTTCATTTTTACTGCGCTTATCCCTCTATAAT 9 13376501 0.833467586 3 9 101 1 1.079181246 0 0.333333333 0.5 9 0 0 12 2L:13376482-13376515 6 CG9302 FBtr0080470 13376453 13376712 TATCCC 6mer2-7 dme-miR-317-5p 2L - 13376480 13376509 3'utr CG9302 FlyBase G8159.1 ATTTTTACTGCGCTTATCCCTCTATAATAA 13 13376501 0.786437851 5 13 126 1 1.301029996 0 0.307692308 0.55 13 0 0 20 2L:13376480-13376509 6 11 196 FBgn0032514 1605.19 98.23333333 149.59 0.006852771 0.111978283 0.073534327 6 6 6 0.01 dme-miR-986-5p 6mer2-7 TTCGAG 2L 13382259 13382264 + 2L_13382259_13382264_+ 1 1 1 0 beta'COP FBtr0080469 13382180 13382382 2L + 13382246 13382296 3'utr beta'COP FlyBase G4456.1 ACATTTCGTGCATTTCGAGCCACAGAATTCCGCGCATGCATTCACATTTGA 15 13382273 0.930221863 4 15 60 1 1.342422681 0.272727273 0.4 0.590909091 15 0 0 22 2L:13382246-13382296 6 beta'COP FBtr0080469 13382180 13382382 TTCGAG 6mer2-7 dme-miR-986-5p 2L + 13382248 13382301 3'utr beta'COP FlyBase G3462.1 ATTTCGTGCATTTCGAGCCACAGAATTCCGCGCATGCATTCACATTTGATTTGA 14 13382273 0.783818562 4 13 63 0.956521739 1.342422681 0.565217391 0.428571429 0.652173913 14 1 0 22 2L:13382248-13382301 6 13.5 197 FBgn0025724 1623.336667 63.76333333 97.48 0.008316205 0.211720424 0.138489947 -14 -14 -14 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2L 13385551 13385557 + 2L_13385551_13385557_+ 0.661615511 0.661615511 0.661615511 0 loqs FBtr0080497|FBtr0342633|FBtr0342632|FBtr0100220|FBtr0080498 13385231|13385231|13385231|13384666|13385231 13385671|13385671|13385671|13385671|13385671 2L + 13385522 13385574 3'utr loqs FlyBase G4461.1 AGACAAGCGTGTAATCGATATTGGAATCTTCTAGTCGCTTTCAAATTCTGAAA 64 13385550 0.987526409 6 64 568 1 1.944482672 0 0.28125 0.477272727 64 0 0 88 2L:13385522-13385574 7 loqs FBtr0342633|FBtr0342632|FBtr0100220|FBtr0080498|FBtr0080497 13385231|13385231|13384666|13385231|13385231 13385671|13385671|13385671|13385671|13385671 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2L + 13385521 13385566 3'utr loqs FlyBase G3466.1 CAGACAAGCGTGTAATCGATATTGGAATCTTCTAGTCGCTTTCAAA 49 13385550 0.98663556 5 49 413 1 1.838849091 0 0.244897959 0.463768116 49 0 0 69 2L:13385521-13385566 7 55.5 198 FBgn0032515 158.85 11.16666667 17.08333333 0.349386213 4.970149254 3.248780488 1 1 1 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 2L 13394050 13394056 - 2L_13394050_13394056_- 0.823349562 0.823349562 0.823349562 0 RpL24 FBtr0342637 13393685 13394412 2L - 13394034 13394074 3'utr RpL24 FlyBase G10595.1 AATTGAATATCCGAAGTTAGACTGAGAGTATAAAAATCGCA 15 13394058 0.801497233 2 15 75 1 1.361727836 0.086956522 0.266666667 0.52173913 15 0 0 23 2L:13394034-13394074 7 RpL24 FBtr0342637 13393685 13394412 AGACTGA 7mer-A1 dme-miR-14-3p 2L - 13394038 13394072 3'utr RpL24 FlyBase G8167.1 TTGAATATCCGAAGTTAGACTGAGAGTATAAAAAT 18 13394058 0.785353793 3 18 74 1 1.431363764 0.222222222 0.444444444 0.62962963 18 0 0 27 2L:13394038-13394072 7 16 199 FBgn0032518 6558.51 1040.203333 1578.5 0.002439579 0.015381608 0.010136205 2 2 2 0.01 dme-miR-932-5p 7mer-A1 GAATTGA 2L 13394348 13394354 - 2L_13394348_13394354_- 0.823349562 0.823349562 0.823349562 0 RpL24 FBtr0342637 13393685 13394412 2L - 13394339 13394449 stop_codon RpL24 FlyBase G10596.1 GCAGAAGGCTGCTCCCCGCGTCGGAGGCAAGCGGTAAACACCTTTCGCCGGTAGTGATGTGCTAAAGTTAGTCCAGGATTTAAGGAACCACTCGTGAATTGAAAATTAAAC 107 13394351 0.761265761 19 102 506 0.940740741 1.50174373 0.140740741 0.214953271 0.377777778 107 5 3 127 2L:13394339-13394449 7 RpL24 FBtr0342637 13393685 13394412 GAATTGA 7mer-A1 dme-miR-932-5p 2L - 13394304 13394419 stop_codon RpL24 FlyBase G8168.1 GCGGTAAACACCTTTCGCCGGTAGTGATGTGCTAAAGTTAGTCCAGGATTTAAGGAACCACTCGTGAATTGAAAATTAAACAAACGCCGCGAATGCGAATTCGTGGTGACCAAAAA 122 13394351 0.953629484 18 120 547 0.989795918 2.28780173 0.12244898 0.401639344 0.62755102 122 2 0 194 2L:13394304-13394419 7 69.5 200 FBgn0032518 6558.51 1040.203333 1578.5 0.010596919 0.06681386 0.044029142 -3 -3 -3 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 134009 134014 + 2L_134009_134014_+ 1 1 1 0 Gs1 FBtr0078115|FBtr0078114 133681|133681 134472|134472 2L + 133997 134030 5'utr Gs1 FlyBase G475.1 CGTTAATTTTTTGTACCTTTTAGATCAAACAAAC 13 134016 0.70171495 3 13 147 1 1.204119983 0 0.153846154 0.3125 13 0 0 16 2L:133997-134030 6 Gs1 FBtr0078114|FBtr0078115 133681|133681 134472|134472 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 133996 134027 5'utr Gs1 FlyBase G395.1 ACGTTAATTTTTTGTACCTTTTAGATCAAACA 17 134016 0.742041269 2 17 193 1 1.447158031 0 0.470588235 0.678571429 17 0 0 28 2L:133996-134027 6 15 201 FBgn0001142 30.66666667 1.793333333 2.72 0.489130435 8.364312268 5.514705882 -7 -7 -7 0.01 dme-miR-1007-3p 6mer3-8 TGAGCT 2L 13410801 13410806 + 2L_13410801_13410806_+ 1 1 1 0 CG7110 FBtr0080500|FBtr0345438 13410635|13410635 13411047|13410955 2L + 13410765 13410857 3'utr CG7110 FlyBase G4481.1 ATTTTGTAAACAACTCATGTAGTTATAACTTTATAGTGAGCTGGTTCCAAGTGCTTCGGCTGTTTCATTCAGCGACTCTAATACATAAGGCAT 19 13410820 0.748782427 12 17 137 0.923076923 1.380211242 0.153846154 0.210526316 0.423076923 19 2 0 24 2L:13410765-13410857 6 CG7110 FBtr0080500|FBtr0345438 13410635|13410635 13411047|13410955 TGAGCT 6mer3-8 dme-miR-1007-3p 2L + 13410767 13410827 3'utr CG7110 FlyBase G3479.1 TTTGTAAACAACTCATGTAGTTATAACTTTATAGTGAGCTGGTTCCAAGTGCTTCGGCTGT 14 13410784 0.776642792 6 13 105 1 1.322219295 0.19047619 0.285714286 0.523809524 14 0 0 21 2L:13410767-13410827 6 9 202 FBgn0032521 924.9866667 37.5 57.29 0.00972987 0.24 0.157095479 -19 17 -1 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2L 13502806 13502812 - 2L_13502806_13502812_- 0.661615511 0.661615511 0.661615511 0 B4 FBtr0332509|FBtr0080514|FBtr0080513 13500622|13502654|13502654 13504503|13504503|13504503 2L - 13502752 13502841 3'utr B4 FlyBase G10603.1 AAGTAGAGTTTAGACACTAAGGTCCAGTTTCTAGTCTTAATTTGAAAACAAATATGAAGCCGTTTCGAAATGGAGACATGCCAAACTTTT 61 13502813 0.952635164 6 58 479 0.974025974 1.875061263 0.077922078 0.229508197 0.38961039 61 2 0 75 2L:13502752-13502841 7 B4 FBtr0080513|FBtr0332509|FBtr0080514 13502654|13500622|13502654 13504503|13504503|13504503 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2L - 13502793 13502840 3'utr B4 FlyBase G8172.1 AGTAGAGTTTAGACACTAAGGTCCAGTTTCTAGTCTTAATTTGAAAAC 45 13502813 0.73558114 2 44 376 0.983606557 1.77815125 0.06557377 0.333333333 0.508196721 45 1 0 60 2L:13502793-13502840 7 48 203 FBgn0023407 923.55 17.94 27.61666667 0.051973364 2.675585284 1.738080869 1 1 1 0.01 dme-bantam-3p 6mer2-7 GATCTC 2L 13503093 13503098 - 2L_13503093_13503098_- 1 1 1 0 B4 FBtr0332509|FBtr0080514|FBtr0080513 13500622|13502654|13502654 13504503|13504503|13504503 2L - 13503075 13503154 3'utr B4 FlyBase G10605.1 ATTGTATATTTGTAAAATAGCATAAACTTTTAGGGCAAAATGCCAAACTTTTACACGATCTCTCGTATTTTGTCGTTCTT 40 13503103 0.791648182 11 36 336 0.96 1.681241237 0.02 0.175 0.34 40 2 0 48 2L:13503075-13503154 6 B4 FBtr0080513|FBtr0332509|FBtr0080514 13502654|13500622|13502654 13504503|13504503|13504503 GATCTC 6mer2-7 dme-bantam-3p 2L - 13503074 13503137 3'utr B4 FlyBase G8173.1 TAGCATAAACTTTTAGGGCAAAATGCCAAACTTTTACACGATCTCTCGTATTTTGTCGTTCTTT 30 13503104 0.681875235 10 28 262 0.866666667 1.591064607 0 0.333333333 0.555555556 30 6 0 39 2L:13503074-13503137 6 29 204 FBgn0023407 923.55 17.94 27.61666667 0.031400574 1.616499443 1.050090525 5 6 5.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2L 13636744 13636750 + 2L_13636744_13636750_+ 0.823349562 0.823349562 0.823349562 0 kuz FBtr0080509|FBtr0080510|FBtr0342903 13636648|13636648|13636247 13638238|13639411|13636995 2L + 13636728 13636757 3'utr kuz FlyBase G4505.1 ATAGAATCGCCCGCTGCTAGTCATCGAACT 12 13636742 0.860059869 2 12 49 1 1.079181246 0.166666667 0 0 12 0 0 12 2L:13636728-13636757 7 kuz FBtr0342903|FBtr0080509|FBtr0080510 13636247|13636648|13636648 13636995|13638238|13639411 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L + 13636720 13636757 3'utr kuz FlyBase G3496.1 AACCACATATAGAATCGCCCGCTGCTAGTCATCGAACT 6 13636742 0.945611426 3 6 27 1 0.84509804 0.428571429 0.166666667 0.285714286 6 0 0 7 2L:13636720-13636757 7 9 205 FBgn0259984 6208.386667 134.8066667 206.8566667 0.001449652 0.066762277 0.043508387 2 2 2 0.01 dme-miR-79-3p 7mer-A1 AGCTTTA 2L 13637314 13637320 + 2L_13637314_13637320_+ 0.823349562 0.823349562 0.823349562 0 kuz FBtr0080509|FBtr0080510 13636648|13636648 13638238|13639411 2L + 13637289 13637339 stop_codon kuz FlyBase G4507.1 CGTCGCGCCGCCTCCGCTACAAGTAAGCTTTAGTCGGCCGACATCGTTGCA 10 13637312 0.961517742 2 9 58 0.833333333 1 0.416666667 0.2 0.333333333 10 2 0 10 2L:13637289-13637339 7 kuz FBtr0080509|FBtr0080510 13636648|13636648 13638238|13639411 AGCTTTA 7mer-A1 dme-miR-79-3p 2L + 13637298 13637331 stop_codon kuz FlyBase G3497.1 GCCTCCGCTACAAGTAAGCTTTAGTCGGCCGACA 5 13637321 0.894000975 3 5 26 1 0.903089987 0.125 0.2 0.5 5 0 0 8 2L:13637298-13637331 7 7.5 206 FBgn0259984 6208.386667 134.8066667 206.8566667 0.001208043 0.055635231 0.03625699 2 -7 -2.5 0.01 dme-miR-283-5p 8mer-m1 TGATATTT 2L 13637779 13637786 + 2L_13637779_13637786_+ 0.555593841 0.555593841 0.555593841 0 kuz FBtr0100660|FBtr0080509|FBtr0080510|FBtr0301412 13637320|13636648|13636648|13637495 13639411|13638238|13639411|13638238 2L + 13637747 13637786 3'utr kuz FlyBase G4509.1 AATTTCGTAATACAGAAAAAGCTGAAAGTGAATGATATTT 9 13637778 0.873734376 4 9 38 1 1.113943352 0.153846154 0.333333333 0.538461538 9 0 0 13 2L:13637747-13637786 8 kuz FBtr0301412|FBtr0080509|FBtr0080510|FBtr0100660 13637495|13636648|13636648|13637320 13638238|13638238|13639411|13639411 TGATATTT 8mer-m1 dme-miR-283-5p 2L + 13637755 13637786 3'utr kuz FlyBase G3500.1 AATACAGAAAAAGCTGAAAGTGAATGATATTT 5 13637779 0.915451934 2 5 19 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2L:13637755-13637786 8 6.5 207 FBgn0259984 6208.386667 134.8066667 206.8566667 0.001046971 0.0482172 0.031422724 1 0 0.5 0.01 dme-miR-968-5p 6mer3-8 ACTACT 2L 13638795 13638800 + 2L_13638795_13638800_+ 1 1 1 0 kuz FBtr0100660|FBtr0080510 13637320|13636648 13639411|13639411 2L + 13638724 13638808 3'utr kuz FlyBase G4511.3 TTTTGTCTGTGTTTCGTATTTGCATGCTCAAGAACTAATCGTGCAACTACTCACGGAGTCCCGACTGATGTACTACTCCAAGAAA 107 13638796 0.933798296 10 101 525 0.960629921 2.086359831 0.322834646 0.177570093 0.307086614 107 5 0 122 2L:13638724-13638808 6 kuz FBtr0080510|FBtr0100660 13636648|13637320 13639411|13639411 ACTACT 6mer3-8 dme-miR-968-5p 2L + 13638769 13638808 3'utr kuz FlyBase G3504.1 ACTACTCACGGAGTCCCGACTGATGTACTACTCCAAGAAA 64 13638796 0.703937022 4 62 307 0.990291262 1.707570176 0.40776699 0.40625 0.631067961 64 0 1 102 2L:13638769-13638808 6 73.5 208 FBgn0259984 6208.386667 134.8066667 206.8566667 0.011838824 0.545225261 0.355318498 -1 -1 -1 0.01 dme-miR-92b-3p 7mer-A1 TGCAATA 2L 13773525 13773531 + 2L_13773525_13773531_+ 0.782911824 0.782911824 0.782911824 0 TM9SF4 FBtr0343657|FBtr0080532 13773482|13773482 13773905|13773905 2L + 13773453 13773550 stop_codon TM9SF4 FlyBase G4524.1 AAGAATCTACGGAGCTGTGAAGATCGACTAAGCTGTGTCACCCACTCGTCACGCTGTACACCAAACTATCCTTGCAATATCATTCGATCATAAATATA 27 13773524 0.98178056 12 26 189 0.96875 1.491361694 0.0625 0.185185185 0.3125 27 1 0 31 2L:13773453-13773550 7 TM9SF4 FBtr0343657|FBtr0080532 13773482|13773482 13773905|13773905 TGCAATA 7mer-A1 dme-miR-92b-3p 2L + 13773453 13773587 stop_codon TM9SF4 FlyBase G3514.1 AAGAATCTACGGAGCTGTGAAGATCGACTAAGCTGTGTCACCCACTCGTCACGCTGTACACCAAACTATCCTTGCAATATCATTCGATCATAAATATATTTATAGAGCAACTGAACCCAGTCTCGTCCAGCTGCA 22 13773524 0.803947929 14 21 133 0.971428571 1.531478917 0.285714286 0.363636364 0.6 22 1 0 34 2L:13773453-13773587 7 14.5 209 FBgn0028541 781.57 38.32 58.46 0.018552401 0.378392484 0.248032843 1 1 1 0.01 dme-miR-1007-3p 6mer3-8 TGAGCT 2L 13773642 13773647 + 2L_13773642_13773647_+ 0.999301991 1 0.999650996 0.000493561 TM9SF4 FBtr0343657|FBtr0080532 13773482|13773482 13773905|13773905 2L + 13773557 13773684 3'utr TM9SF4 FlyBase G4525.1 GAGCAACTGAACCCAGTCTCGTCCAGCTGCAGAAATCAATATAAACAAAACGGAAACTAAGCGAAAACTCGACGACTCAGCCATGTGAGCTAACTTCCCCTTCTTGTCCCCAGCTGCAGAAAGTCACC 22 13773657 0.949852624 12 21 89 1 1.414973348 0.269230769 0.238095238 0.384615385 21 0 0 26 2L:13773557-13773684 6 TM9SF4 FBtr0343657|FBtr0080532 13773482|13773482 13773905|13773905 TGAGCT 6mer3-8 dme-miR-1007-3p 2L + 13773627 13773678 3'utr TM9SF4 FlyBase G3515.1 GACGACTCAGCCATGTGAGCTAACTTCCCCTTCTTGTCCCCAGCTGCAGAAA 14 13773658 0.980288688 5 12 93 0.761904762 1.204119983 0.095238095 0.357142857 0.571428571 14 5 0 16 2L:13773627-13773678 6 5.5 210 FBgn0028541 781.57 38.32 58.46 0.007037118 0.143528184 0.094081423 -15 -16 -15.5 0.01 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 13782423 13782429 - 2L_13782423_13782429_- 0.823342577 0.823349562 0.82334607 4.95E-06 CG16890 FBtr0343661|FBtr0329825 13782229|13782229 13782609|13782609 2L - 13782411 13782462 3'utr CG16890 FlyBase G10642.1 GACACCAAATCTAAAGTTGAACTGGACATTAAGGCTGTGACTCTGATTGATT 21 13782440 0.743182755 7 20 134 0.966666667 1.462397998 0.233333333 0.333333333 0.533333333 21 1 0 29 2L:13782411-13782462 7 CG16890 FBtr0329825|FBtr0343661 13782229|13782229 13782609|13782609 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L - 13782414 13782448 3'utr CG16890 FlyBase G8199.1 AGTTGAACTGGACATTAAGGCTGTGACTCTGATTG 9 13782433 0.73314951 3 9 56 1 1.041392685 0.272727273 0.222222222 0.363636364 9 0 0 11 2L:13782414-13782448 7 14 211 FBgn0028932 129.2066667 16.03333333 24.55666667 0.108353542 0.873180873 0.57010995 11 4 7.5 0.01 dme-miR-968-5p 7mer-A1 CTACTTA 2L 13790418 13790424 + 2L_13790418_13790424_+ 0.823242564 0.82319958 0.823221072 3.04E-05 CG31731 FBtr0110941 13790300 13790562 2L + 13790360 13790439 3'utr CG31731 FlyBase G4546.1 ATTTCATTATTTCCCTCAAATATGGAACTTTTATGAATCTCTATCCGGTGGGAATAATCTACTTAATGTATTTAGGGACT 81 13790393 0.988732859 11 76 714 0.9375 1.954242509 0.197916667 0.172839506 0.302083333 81 6 0 90 2L:13790360-13790439 7 CG31731 FBtr0110941 13790300 13790562 CTACTTA 7mer-A1 dme-miR-968-5p 2L + 13790372 13790422 3'utr CG31731 FlyBase G3527.1 CCCTCAAATATGGAACTTTTATGAATCTCTATCCGGTGGGAATAATCTACT 46 13790393 0.703545887 8 42 400 0.940298507 1.799340549 0.268656716 0.347826087 0.552238806 46 4 0 63 2L:13790372-13790422 5 7 212 FBgn0028539 1454.836667 37.27 56.71 0.004811537 0.187818621 0.12343502 25 25 25 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 2L 1380381 1380386 - 2L_1380381_1380386_- 1 1 1 0 lea FBtr0329985|FBtr0077941 1380084|1380084 1381443|1381611 2L - 1380346 1380410 3'utr lea FlyBase G6793.1 TAGAAATACCACCCAGGCATATATGAAAAAATCCTTCAATTTGAGCCAAGAAAAGCAAGAAGATC 62 1380370 0.741412192 7 58 320 0.959459459 1.851258349 0.013513514 0.14516129 0.283783784 62 3 0 71 2L:1380346-1380410 6 lea FBtr0329985|FBtr0077941 1380084|1380084 1381443|1381611 GAAAAA 6mer3-8 dme-miR-980-5p 2L - 1380347 1380397 3'utr lea FlyBase G5311.1 CAGGCATATATGAAAAAATCCTTCAATTTGAGCCAAGAAAAGCAAGAAGAT 41 1380370 0.967239744 6 39 211 0.941176471 1.681241237 0.019607843 0.219512195 0.37254902 41 3 0 48 2L:1380347-1380397 6 7.5 213 FBgn0002543 15.93666667 0.32 0.503333333 0.470612843 23.4375 14.90066225 -16 -16 -16 0.01 dme-miR-980-3p 6mer3-8 GGCAGC 2L 1380777 1380782 - 2L_1380777_1380782_- 0.99996957 0.999990546 0.999980058 1.48E-05 lea FBtr0329985|FBtr0077941 1380084|1380084 1381443|1381611 2L - 1380723 1380813 3'utr lea FlyBase G6798.1 TAGTGTATACACCCACTTAGATAGATCGATGGGCAGCATTTTGTTTGTTACTTAAGGGGTTCGTAATTAGTCTAAGCGTCCAGGCAGATAT 31 1380774 0.704633136 12 30 190 0.972972973 1.556302501 0.135135135 0.161290323 0.297297297 31 1 0 36 2L:1380723-1380813 6 lea FBtr0329985|FBtr0077941 1380084|1380084 1381443|1381611 GGCAGC 6mer3-8 dme-miR-980-3p 2L - 1380700 1380814 3'utr lea FlyBase G5313.1 ATAGTGTATACACCCACTTAGATAGATCGATGGGCAGCATTTTGTTTGTTACTTAAGGGGTTCGTAATTAGTCTAAGCGTCCAGGCAGATATCAATTCAGTAGCCACGAATGTTT 27 1380773 0.981193301 11 26 191 0.974358974 1.579783597 0.076923077 0.37037037 0.564102564 27 1 0 38 2L:1380700-1380814 6 19 214 FBgn0002543 15.93666667 0.32 0.503333333 1.192219201 59.375 37.74834437 -8 -9 -8.5 0.01 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 1380829 1380836 - 2L_1380829_1380836_- 0.625364009 0.625364009 0.625364009 0 lea FBtr0329985|FBtr0077941 1380084|1380084 1381443|1381611 2L - 1380816 1380880 3'utr lea FlyBase G6799.1 AAGTTCCTCCAAGTATGCAGACGATGATAGCCAAAACGCTGCGTTAGCTTTAGAGTATACACATA 37 1380837 0.790261873 9 37 221 1 1.633468456 0.023255814 0.162162162 0.279069767 37 0 0 43 2L:1380816-1380880 8 lea FBtr0329985|FBtr0077941 1380084|1380084 1381443|1381611 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 1380817 1380877 3'utr lea FlyBase G5314.1 TTCCTCCAAGTATGCAGACGATGATAGCCAAAACGCTGCGTTAGCTTTAGAGTATACACAT 26 1380837 0.801575355 5 24 140 0.930232558 1.301029996 0.069767442 0.461538462 0.674418605 26 2 1 40 2L:1380817-1380877 8 23 215 FBgn0002543 15.93666667 0.32 0.503333333 1.443212717 71.875 45.69536424 1 1 1 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 2L 1381143 1381149 - 2L_1381143_1381149_- 0.823349562 0.823349562 0.823349562 0 lea FBtr0329985|FBtr0077941 1380084|1380084 1381443|1381611 2L - 1381116 1381179 3'utr lea FlyBase G6800.2 TGTCACAAATGAGAAATGTGACCAAGACTGAGACTGACAGAGTGCGAGATTCGTGTGAGGATTA 1386 1381151 0.978131239 10 1347 4095 0.975609756 2.369745808 0.387269482 0.164502165 0.311124331 1386 35 6 1640 2L:1381116-1381179 7 lea FBtr0329985|FBtr0077941 1380084|1380084 1381443|1381611 AGACTGA 7mer-A1 dme-miR-14-3p 2L - 1381119 1381176 3'utr lea FlyBase G5316.1 CACAAATGAGAAATGTGACCAAGACTGAGACTGACAGAGTGCGAGATTCGTGTGAGGA 979 1381151 0.967139608 8 943 2772 0.97146402 2.495821753 0.377171216 0.433094995 0.655707196 979 42 4 1566 2L:1381119-1381176 7 1170.5 216 FBgn0002543 15.93666667 0.32 0.503333333 73.44697762 3657.8125 2325.496689 2 2 2 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 13819396 13819402 + 2L_13819396_13819402_+ 0.754178804 0.754178804 0.754178804 0 Sos FBtr0080541|FBtr0080541|FBtr0080541 13819377|13819377|13819377 13819824|13819824|13819824 2L + 13819333 13819416 lincRNA_intron-lincRNA_exon Sos FlyBase G4579.1 AGATAAAGGTACGATGTTTCTTTACCCAAGTACAAACGAAGAATAATTTAAATTGCCTGGCGATGTGATAAGGACGAAAACTAC 33 13819387 0.974682324 9 29 191 0.868421053 1.041392685 0.368421053 0.151515152 0.263157895 33 3 2 33 2L:13819333-13819416 7 Sos FBtr0080541|FBtr0080541|FBtr0080541 13819377|13819377|13819377 13819824|13819824|13819824 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 13819377 13819409 stop_codon Sos FlyBase G3558.1 AATTTAAATTGCCTGGCGATGTGATAAGGACGA 10 13819388 0.701574928 6 9 49 0.75 1.079181246 0.5625 0.3 0.5625 10 4 0 12 2L:13819377-13819409 7 15 217 FBgn0001965 887.1 19.05333333 29.30333333 0.016909029 0.787263821 0.511887157 9 8 8.5 0.01 dme-miR-304-5p 6mer3-8 TGAGAT 2L 13819488 13819493 + 2L_13819488_13819493_+ 1 0.999592505 0.999796253 0.000288146 Sos FBtr0080541 13819377 13819824 2L + 13819432 13819500 3'utr Sos FlyBase G4580.1 GATTCAAAGTTGCGAGCACTGCTTGAGTGCAGATATATATATGAGAGAACGGAACGTGAGATATATATA 12 13819488 0.915053286 7 11 65 0.916666667 0.740362689 0.166666667 0 0 12 0 1 11 2L:13819432-13819500 6 Sos FBtr0080541 13819377 13819824 TGAGAT 6mer3-8 dme-miR-304-5p 2L + 13819474 13819508 3'utr Sos FlyBase G3559.1 GAGAGAACGGAACGTGAGATATATATATATATATA 6 13819488 0.97085743 3 6 33 1 0.77815125 0 0 0 6 0 0 6 2L:13819474-13819508 6 6 218 FBgn0001965 887.1 19.05333333 29.30333333 0.006763612 0.314905528 0.204754863 0 0 0 0.01 dme-miR-33-5p 6mer2-7 AATGCA 2L 13819663 13819668 + 2L_13819663_13819668_+ 1 1 1 0 Sos FBtr0080541 13819377 13819824 2L + 13819608 13819722 3'utr Sos FlyBase G4582.1 AGACAGACAAAATACGCTCTCATTTACACACAACAGGCACGCGCATATGGATAGGAATGCAGGACACACAAACCAAGCAAGCAACCAAGCAACCAACAAGAAATGCAAACAAGAA 24 13819665 0.876529361 7 22 56 0.928571429 1.414973348 0.071428571 0.125 0.25 24 2 0 26 2L:13819608-13819722 6 Sos FBtr0080541 13819377 13819824 AATGCA 6mer2-7 dme-miR-33-5p 2L + 13819643 13819681 3'utr Sos FlyBase G3560.1 GGCACGCGCATATGGATAGGAATGCAGGACACACAAACC 5 13819665 0.9112595 2 5 12 1 0.903089987 0 0.4 0.625 5 0 0 8 2L:13819643-13819681 6 10.5 219 FBgn0001965 887.1 19.05333333 29.30333333 0.011836321 0.551084675 0.35832101 -2 -2 -2 0.01 dme-miR-282-5p 6mer2-7 GAGGCT 2L 13824070 13824075 - 2L_13824070_13824075_- 1 1 1 0 tam FBtr0080571 13823978 13824139 2L - 13824042 13824098 3'utr tam FlyBase G10648.1 ACTCAGGAAGTCAAGGAGACTTGGAGGCTGTTACTAGTTCCTCTTAAATTGTAAGGC 28 13824077 0.814754382 7 26 155 0.96875 1.491361694 0.125 0.107142857 0.21875 28 1 0 31 2L:13824042-13824098 6 tam FBtr0080571 13823978 13824139 GAGGCT 6mer2-7 dme-miR-282-5p 2L - 13824042 13824098 3'utr tam FlyBase G8204.1 ACTCAGGAAGTCAAGGAGACTTGGAGGCTGTTACTAGTTCCTCTTAAATTGTAAGGC 19 13824077 0.920677179 7 18 92 1 1.51851394 0.212121212 0.578947368 0.757575758 19 0 0 33 2L:13824042-13824098 6 21 220 FBgn0004406 477.07 15.66333333 23.98666667 0.044018697 1.34071079 0.875486381 2 2 2 0.01 dme-miR-12-5p 6mer3-8 AATACT 2L 13824128 13824133 - 2L_13824128_13824133_- 1 0.999999987 0.999999993 0 tam FBtr0080571 13823978 13824139 2L - 13824114 13824151 stop_codon tam FlyBase G10649.1 AAGAAGAGTTAGCTGCCAAATACTAGAGATTAAATCAT 19 13824138 0.89744506 3 19 117 1 1.301029996 0.1 0.052631579 0.1 19 0 0 20 2L:13824114-13824151 6 tam FBtr0080571 13823978 13824139 AATACT 6mer3-8 dme-miR-12-5p 2L - 13824116 13824151 stop_codon tam FlyBase G8205.1 AAGAAGAGTTAGCTGCCAAATACTAGAGATTAAATC 12 13824138 0.85235001 3 11 65 0.894736842 1.230448921 0.315789474 0.416666667 0.631578947 12 2 0 17 2L:13824116-13824151 6 15.5 221 FBgn0004406 477.07 15.66333333 23.98666667 0.032489991 0.989572249 0.646192329 5 5 5 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 2L 13827997 13828002 - 2L_13827997_13828002_- 1 1 1 0 Arpc1 FBtr0080570|FBtr0080569 13827939|13827939 13828215|13828215 2L - 13827965 13828031 3'utr Arpc1 FlyBase G10654.1 AACTTCCATAATGGTTCCGAAAGTGTGTGTGTGTTTTAAAGTGTTTCACCTTTATAGCAAACTGAAT 11 13828020 0.978799198 7 11 103 1 1.079181246 0 0.090909091 0.166666667 11 0 0 12 2L:13827965-13828031 6 Arpc1 FBtr0080569|FBtr0080570 13827939|13827939 13828215|13828215 TGTGTT 6mer3-8 dme-miR-317-3p 2L - 13827995 13828031 3'utr Arpc1 FlyBase G8210.1 AACTTCCATAATGGTTCCGAAAGTGTGTGTGTGTTTT 5 13828020 0.823430351 2 4 42 0.714285714 0.698970004 0 0.4 0.571428571 5 2 0 5 2L:13827995-13828031 6 5 222 FBgn0001961 2571.706667 187.57 286.9733333 0.001944234 0.026656715 0.017423222 18 18 18 0.01 dme-miR-8-3p 6mer2-7 AGTATT 2L 13828140 13828145 - 2L_13828140_13828145_- 1 0.999999997 0.999999999 0 Arpc1 FBtr0080570|FBtr0080569 13827939|13827939 13828215|13828215 2L - 13828081 13828243 stop_codon Arpc1 FlyBase G10656.1 TGGCGGCATGCGCAACCTGCAGATCTAGTGCGGCCCGGAACGGACCAGCGTTACGTGTTATTGTCTGTTAGCGAGTGTGTTGGCCTGGCCAGGAGCGAAGTATTTGCCAAAATGTTTTCCAAAATCGCTTTTCCCATTGTTCTGTACCGTGCGAAAGCCTTTT 56 13828131 0.966847073 18 50 381 0.888888889 1.748188027 0.238095238 0.125 0.222222222 56 7 0 56 2L:13828081-13828243 6 Arpc1 FBtr0080569|FBtr0080570 13827939|13827939 13828215|13828215 AGTATT 6mer2-7 dme-miR-8-3p 2L - 13828080 13828309 stop_codon Arpc1 FlyBase G8211.1 CAAGGTGTCCACCTCGGGCGTCGACGGGCAGCTGGTCATTTGGAATGTGGAGCAGGGCGGCATCAATGGCGGCATGCGCAACCTGCAGATCTAGTGCGGCCCGGAACGGACCAGCGTTACGTGTTATTGTCTGTTAGCGAGTGTGTTGGCCTGGCCAGGAGCGAAGTATTTGCCAAAATGTTTTCCAAAATCGCTTTTCCCATTGTTCTGTACCGTGCGAAAGCCTTTTT 45 13828163 0.977464129 22 42 300 0.956521739 1.51851394 0.391304348 0.333333333 0.565217391 45 2 1 66 2L:13828080-13828309 6 12.5 223 FBgn0001961 2571.706667 187.57 286.9733333 0.004860585 0.066641787 0.043558054 -14 18 2 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-m8 CTGTGAT 2L 13831861 13831867 - 2L_13831861_13831867_- 0.383034805 0.494985708 0.439010256 0.079161241 CG33649 FBtr0091626|FBtr0091626|FBtr0091626 13831480|13831480|13831480 13832624|13832624|13832624 2L - 13831830 13831884 intron-3'utr CG33649 FlyBase G10670.1 GCTCTGCTTCTGGATGGCTGTGATCATGGCCGGGACTCGCAATCCCTGCTCTTAC 45 13831858 0.841147265 5 44 281 0.981132075 1.716003344 0.698113208 0.155555556 0.283018868 45 1 0 52 2L:13831830-13831884 7 CG33649 FBtr0091626|FBtr0091626|FBtr0091626 13831480|13831480|13831480 13832624|13832624|13832624 CTGTGAT 7mer-m8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 13831831 13831882 3'utr CG33649 FlyBase G8220.1 TCTGCTTCTGGATGGCTGTGATCATGGCCGGGACTCGCAATCCCTGCTCTTA 34 13831858 0.859863205 4 32 205 0.929824561 1.72427587 0.561403509 0.529411765 0.719298246 34 4 0 53 2L:13831831-13831882 7 38.5 224 FBgn0064115 259.7433333 20.19 30.89333333 0.148223246 1.906884596 1.246223565 -9 -9 -9 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 13831960 13831967 - 2L_13831960_13831967_- 0.650171355 0.650171355 0.650171355 0 CG33649 FBtr0091626|FBtr0091626|FBtr0091626 13831480|13831480|13831480 13832624|13832624|13832624 2L - 13831945 13831991 5'utr CG33649 FlyBase G10671.1 TTGTGCAACCGACTGTCATAAGGTCTGTGATAGAGCTGGAAACTACC 41 13831968 0.738875031 8 35 257 0.85106383 1.124938737 0.468085106 0.146341463 0.255319149 41 5 2 40 2L:13831945-13831991 8 CG33649 FBtr0091626|FBtr0091626|FBtr0091626 13831480|13831480|13831480 13832624|13832624|13832624 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 13831947 13831982 5'utr CG33649 FlyBase G8221.1 CGACTGTCATAAGGTCTGTGATAGAGCTGGAAACTA 17 13831968 0.751527328 3 14 105 0.90625 1.161368002 0.09375 0.411764706 0.6875 17 2 1 29 2L:13831947-13831982 8 27.5 225 FBgn0064115 259.7433333 20.19 30.89333333 0.105873747 1.362060426 0.890159689 1 1 1 0.01 dme-miR-190-5p 6mer3-8 ACATAT 2L 13899027 13899032 - 2L_13899027_13899032_- 1 1 1 0 Smg5 FBtr0080562 13898826 13899821 2L - 13899020 13899087 3'utr Smg5 FlyBase G10676.1 GCTTCTGACTAGGCAATCCGCGTGATCCTCTTCGCAAGAACAAAGTATATGGTATACATATATATATA 16 13899062 0.788678145 5 15 102 0.95 1.278753601 0.2 0.1875 0.35 16 1 0 19 2L:13899020-13899087 6 Smg5 FBtr0080562 13898826 13899821 ACATAT 6mer3-8 dme-miR-190-5p 2L - 13899027 13899078 3'utr Smg5 FlyBase G8226.1 TAGGCAATCCGCGTGATCCTCTTCGCAAGAACAAAGTATATGGTATACATAT 17 13899062 0.726627003 6 16 85 0.965517241 1.447158031 0.103448276 0.470588235 0.689655172 17 1 0 28 2L:13899027-13899078 5 3 226 FBgn0019890 1083.97 27.57666667 42.05333333 0.002767604 0.108787622 0.071337984 30 30 30 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 13899145 13899150 - 2L_13899145_13899150_- 1 1 1 0 Smg5 FBtr0080562 13898826 13899821 2L - 13899133 13899216 3'utr Smg5 FlyBase G10677.1 TGTACCATGTCGTATTCAAGATTTCGCATTTCCTGTGTCGGGCTGGACTATGGATCCAAAAACTCTTGATCTTTCCTGCAGTTG 20 13899150 0.787885031 11 20 153 1 1.342422681 0.136363636 0.1 0.181818182 20 0 0 22 2L:13899133-13899216 6 Smg5 FBtr0080562 13898826 13899821 TGATCT 6mer3-8 dme-bantam-3p 2L - 13899133 13899181 3'utr Smg5 FlyBase G8227.1 TGTCGGGCTGGACTATGGATCCAAAAACTCTTGATCTTTCCTGCAGTTG 9 13899150 0.979768736 4 9 61 1 1.079181246 0.083333333 0.222222222 0.416666667 9 0 0 12 2L:13899133-13899181 6 11 227 FBgn0019890 1083.97 27.57666667 42.05333333 0.010147882 0.398887949 0.261572606 0 0 0 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG 2L 14048793 14048798 + 2L_14048793_14048798_+ 0.999997071 0.99834022 0.999168645 0.001171605 NimC4 FBtr0080592 14048763 14048863 2L + 14048771 14048818 3'utr NimC4 FlyBase G4599.1 CAGGTTCATCCCTTGGCGTTGGGCTGTGTTATATCAACATTGATTGTT 44 14048799 0.978310372 8 43 408 0.957446809 1.653212514 0 0.068181818 0.127659574 44 2 0 45 2L:14048771-14048818 6 NimC4 FBtr0080592 14048763 14048863 GCTGTG 6mer2-7 dme-miR-1008-3p 2L + 14048772 14048816 3'utr NimC4 FlyBase G3570.1 AGGTTCATCCCTTGGCGTTGGGCTGTGTTATATCAACATTGATTG 32 14048799 0.899308396 8 31 294 0.980769231 1.707570176 0.019230769 0.5 0.692307692 32 1 0 51 2L:14048772-14048816 6 37.5 228 FBgn0260011 2 0.196666667 0.31 18.75 190.6779661 120.9677419 -6 -6 -6 0.01 dme-miR-14-3p 6mer2-7 AGACTG 2L 14184939 14184944 - 2L_14184939_14184944_- 0.999999999 1 1 0 Dyrk2 FBtr0089290|FBtr0089289|FBtr0329933|FBtr0100448|FBtr0100447 14184476|14184476|14184476|14184476|14184476 14186137|14186137|14186065|14186137|14186137 2L - 14184927 14185000 3'utr Dyrk2 FlyBase G10700.1 AAGACGGCAGACAGTTTGATATGAACTTGAGCTGGGTAAGATTGCTTACCAAATCCAGACTGTAATTTGAACGA 9 14184947 0.97246596 6 9 57 1 1.041392685 0.545454545 0.222222222 0.363636364 9 0 0 11 2L:14184927-14185000 6 Dyrk2 FBtr0100447|FBtr0100448|FBtr0329933|FBtr0089289|FBtr0089290 14184476|14184476|14184476|14184476|14184476 14186137|14186137|14186065|14186137|14186137 AGACTG 6mer2-7 dme-miR-14-3p 2L - 14184910 14184968 3'utr Dyrk2 FlyBase G8244.1 TGGGTAAGATTGCTTACCAAATCCAGACTGTAATTTGAACGAAGTTTGTAACCTGTAAT 13 14184935 0.906287318 7 12 84 0.888888889 1.204119983 0.277777778 0.307692308 0.5 13 2 0 16 2L:14184910-14184968 6 7.5 229 FBgn0016930 948.1733333 27.29666667 41.49333333 0.007909946 0.274758823 0.180751928 3 -9 -3 0.01 dme-miR-33-5p 8mer-A1 CAATGCAA 2L 14185290 14185297 - 2L_14185290_14185297_- 0.634552243 0.634552243 0.634552243 0 Dyrk2 FBtr0089288|FBtr0089290|FBtr0089289|FBtr0329933|FBtr0100448|FBtr0100447 14185024|14184476|14184476|14184476|14184476|14184476 14186137|14186137|14186137|14186065|14186137|14186137 2L - 14185195 14185325 3'utr Dyrk2 FlyBase G10702.1 ACTACAGGAAATCAACTCTGTAGCCTGCCAATGCAAGATAAATTTGAATTCCGCTTGGATACATATACTTGATCCCATTAAACCAATCCATACGGAATACATGTCATAATTTAATGAAAACACATATTTAA 63 14185294 0.977292234 16 61 387 0.972222222 1.544068044 0.097222222 0.142857143 0.25 63 1 1 70 2L:14185195-14185325 8 Dyrk2 FBtr0100447|FBtr0100448|FBtr0329933|FBtr0089289|FBtr0089290|FBtr0089288 14184476|14184476|14184476|14184476|14184476|14185024 14186137|14186137|14186065|14186137|14186137|14186137 CAATGCAA 8mer-A1 dme-miR-33-5p 2L - 14185280 14185316 3'utr Dyrk2 FlyBase G8246.2 AATCAACTCTGTAGCCTGCCAATGCAAGATAAATTTG 33 14185294 0.951264222 4 32 165 1 1.763427994 0.362068966 0.515151515 0.724137931 33 0 0 58 2L:14185280-14185316 8 39 230 FBgn0016930 948.1733333 27.29666667 41.49333333 0.04113172 1.428745879 0.939910026 -3 -3 -3 0.01 dme-miR-7-5p 6mer2-7 TCTTCC 2L 14185712 14185717 - 2L_14185712_14185717_- 1 1 1 0 Dyrk2 FBtr0089288|FBtr0089290|FBtr0089289|FBtr0329933|FBtr0100448|FBtr0336949|FBtr0100447 14185024|14184476|14184476|14184476|14184476|14185660|14184476 14186137|14186137|14186137|14186065|14186137|14186137|14186137 2L - 14185664 14185790 3'utr Dyrk2 FlyBase G10704.1 TATTTCGCTACTGCCATAGCTAAAGGTATTCAAAATCGTATTCACACCCACAAACCCTTCCTGAAAAGTATTCTCTTCCCTCCAACTCCCTCCATCCTTTTACACTGTATTCAAAATGAACAAACCA 467 14185715 0.984860647 17 458 3806 0.979890311 2.428134794 0.142595978 0.139186296 0.265082267 467 10 1 536 2L:14185664-14185790 6 Dyrk2 FBtr0100447|FBtr0336949|FBtr0100448|FBtr0329933|FBtr0089289|FBtr0089290|FBtr0089288 14184476|14185660|14184476|14184476|14184476|14184476|14185024 14186137|14186137|14186137|14186065|14186137|14186137|14186137 TCTTCC 6mer2-7 dme-miR-7-5p 2L - 14185688 14185739 3'utr Dyrk2 FlyBase G8249.1 AAACCCTTCCTGAAAAGTATTCTCTTCCCTCCAACTCCCTCCATCCTTTTAC 223 14185715 0.74952948 6 215 1746 0.968847352 1.714609139 0.130841121 0.349775785 0.548286604 223 5 5 311 2L:14185688-14185739 6 335.5 231 FBgn0016930 948.1733333 27.29666667 41.49333333 0.353838257 12.29087801 8.085636247 -2 -2 -2 0.01 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 14325959 14325966 + 2L_14325959_14325966_+ 0.625364009 0.625364009 0.625364009 0 wb FBtr0305063 14325709 14326280 2L + 14325937 14326000 3'utr wb FlyBase G4600.1 CACTCTCATGGGCAGACTGATTTAGCTTTAAGCTAGCGCATCTTGATCCTCAGATAACCGAAAC 27 14325980 0.755398847 5 26 185 0.967741935 1.477121255 0.161290323 0.148148148 0.258064516 27 1 0 30 2L:14325937-14326000 8 wb FBtr0305063 14325709 14326280 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L + 14325935 14325996 3'utr wb FlyBase G3572.1 TTCACTCTCATGGGCAGACTGATTTAGCTTTAAGCTAGCGCATCTTGATCCTCAGATAACCG 18 14325957 0.752506779 4 18 130 1 1.568201724 0.108108108 0.611111111 0.810810811 18 0 0 37 2L:14325935-14325996 8 15.5 232 FBgn0261563 1083 12.21333333 18.64 0.014312096 1.269104803 0.831545064 -21 2 -9.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2L 14327834 14327839 + 2L_14327834_14327839_+ 1 1 1 0 wb FBtr0302732|FBtr0302732|FBtr0302732|FBtr0302734|FBtr0302734|FBtr0302734|FBtr0302731|FBtr0302731|FBtr0302731|FBtr0302733|FBtr0302733|FBtr0302733|FBtr0302735|FBtr0302735|FBtr0302735 14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750 14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262 2L + 14327814 14327918 3'utr wb FlyBase G4602.2 AAAACTTTTTCCAAATGTATTGTGATCAATAACGAGTTTAGAGCCACCTATTTATAGCCCTTCACTGCCATATAAGTTAGGTTACTGTAGGATTAGCTTTGAATG 113 14327833 0.861015229 16 103 969 0.916030534 1.602059991 0.083969466 0.123893805 0.244274809 113 9 2 120 2L:14327814-14327918 6 wb FBtr0302731|FBtr0302731|FBtr0302731|FBtr0302732|FBtr0302732|FBtr0302732|FBtr0302734|FBtr0302734|FBtr0302734|FBtr0302733|FBtr0302733|FBtr0302733|FBtr0302735|FBtr0302735|FBtr0302735 14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750 14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 14327782 14327860 3'utr wb FlyBase G3573.1 CGGGCGCATCTGGTTCCTGTTGACGCCACACCAAAACTTTTTCCAAATGTATTGTGATCAATAACGAGTTTAGAGCCAC 45 14327833 0.991308004 8 34 361 0.768115942 0.87917783 0 0.4 0.608695652 45 10 6 53 2L:14327782-14327860 6 49 233 FBgn0261563 1083 12.21333333 18.64 0.045244691 4.012008734 2.628755365 1 1 1 0.01 dme-miR-34-5p 8mer-A1 CACTGCCA 2L 14327876 14327883 + 2L_14327876_14327883_+ 0.678407974 0.678407969 0.678407972 0 wb FBtr0302732|FBtr0302734|FBtr0302731|FBtr0302733|FBtr0302735 14327750|14327750|14327750|14327750|14327750 14328262|14328262|14328262|14328262|14328262 2L + 14327814 14327918 3'utr wb FlyBase G4602.2 AAAACTTTTTCCAAATGTATTGTGATCAATAACGAGTTTAGAGCCACCTATTTATAGCCCTTCACTGCCATATAAGTTAGGTTACTGTAGGATTAGCTTTGAATG 113 14327874 0.861015229 16 103 969 0.916030534 1.602059991 0.083969466 0.123893805 0.244274809 113 9 2 120 2L:14327814-14327918 8 wb FBtr0302731|FBtr0302732|FBtr0302734|FBtr0302733|FBtr0302735 14327750|14327750|14327750|14327750|14327750 14328262|14328262|14328262|14328262|14328262 CACTGCCA 8mer-A1 dme-miR-34-5p 2L + 14327861 14327911 3'utr wb FlyBase G3573.2 CTATTTATAGCCCTTCACTGCCATATAAGTTAGGTTACTGTAGGATTAGCT 29 14327874 0.871061385 7 24 254 0.857142857 1.556302501 0.19047619 0.379310345 0.571428571 29 6 0 36 2L:14327861-14327911 8 33.5 234 FBgn0261563 1083 12.21333333 18.64 0.030932595 2.74290393 1.7972103 2 2 2 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 2L 14328085 14328090 + 2L_14328085_14328090_+ 1 1 1 0 wb FBtr0302732|FBtr0302734|FBtr0302731|FBtr0302733|FBtr0302735 14327750|14327750|14327750|14327750|14327750 14328262|14328262|14328262|14328262|14328262 2L + 14328069 14328105 3'utr wb FlyBase G4605.1 ACGGCTTATCAAAAATTGTGTTTATCGAATCTCCAGT 15 14328084 0.802460095 4 13 125 0.944444444 1.230448921 0.222222222 0.2 0.333333333 15 1 0 17 2L:14328069-14328105 6 wb FBtr0302731|FBtr0302732|FBtr0302734|FBtr0302733|FBtr0302735 14327750|14327750|14327750|14327750|14327750 14328262|14328262|14328262|14328262|14328262 TGTGTT 6mer3-8 dme-miR-317-3p 2L + 14328066 14328104 3'utr wb FlyBase G3575.1 CATACGGCTTATCAAAAATTGTGTTTATCGAATCTCCAG 11 14328084 0.830723643 2 11 102 1 1.146128036 0.357142857 0.272727273 0.428571429 11 0 0 14 2L:14328066-14328104 6 12.5 235 FBgn0261563 1083 12.21333333 18.64 0.011542013 1.023471616 0.670600858 1 1 1 0.01 dme-miR-282-5p 6mer2-7 GAGGCT 2L 14345435 14345440 + 2L_14345435_14345440_+ 1 1 1 0 CG33090 FBtr0343673|FBtr0343675|FBtr0080624|FBtr0343674 14345339|14345339|14345339|14345339 14345795|14345795|14345790|14345790 2L + 14345416 14345485 3'utr CG33090 FlyBase G4608.1 TTAGTTCGATTCTTCTTTTGAGGCTGAATGTGTAACGAGCTTATCGAGATGGTGCGAGTCGAGGAAGATG 33 14345434 0.911428974 3 33 274 1 1.591064607 0.512820513 0.181818182 0.307692308 33 0 0 39 2L:14345416-14345485 6 CG33090 FBtr0343674|FBtr0080624|FBtr0343675|FBtr0343673 14345339|14345339|14345339|14345339 14345790|14345790|14345795|14345795 GAGGCT 6mer2-7 dme-miR-282-5p 2L + 14345394 14345483 3'utr CG33090 FlyBase G3578.1 AGCACAAAGATTTTCTTAGCGTTTAGTTCGATTCTTCTTTTGAGGCTGAATGTGTAACGAGCTTATCGAGATGGTGCGAGTCGAGGAAGA 40 14345434 0.987651497 8 38 336 0.984375 1.498310554 0.59375 0.375 0.609375 40 0 1 63 2L:14345394-14345483 6 27.5 236 FBgn0028916 435.3333333 15.55666667 24.00333333 0.063169985 1.767730876 1.145674212 1 1 1 0.01 dme-miR-1008-3p 7mer-m8 AGCTGTG 2L 14345533 14345539 + 2L_14345533_14345539_+ 0.671795832 0.671795832 0.671795832 0 CG33090 FBtr0343673|FBtr0343675|FBtr0080624|FBtr0343674 14345339|14345339|14345339|14345339 14345795|14345795|14345790|14345790 2L + 14345496 14345560 3'utr CG33090 FlyBase G4609.1 AGTGGTTTTCAAATTTATAGCTTTATCTGTACTTTTAAGCTGTGGAATCTGTTGGCGCTTACTCC 14 14345547 0.726806581 8 14 125 1 1.255272505 0.388888889 0.142857143 0.333333333 14 0 0 18 2L:14345496-14345560 7 CG33090 FBtr0343674|FBtr0080624|FBtr0343675|FBtr0343673 14345339|14345339|14345339|14345339 14345790|14345790|14345795|14345795 AGCTGTG 7mer-m8 dme-miR-1008-3p 2L + 14345506 14345560 3'utr CG33090 FlyBase G3579.1 AAATTTATAGCTTTATCTGTACTTTTAAGCTGTGGAATCTGTTGGCGCTTACTCC 9 14345547 0.98792199 4 8 77 0.857142857 1.079181246 0.142857143 0.555555556 0.714285714 9 2 0 12 2L:14345506-14345560 7 8.5 237 FBgn0028916 435.3333333 15.55666667 24.00333333 0.019525268 0.546389544 0.354117484 -14 -14 -14 0.01 dme-miR-305-5p 7mer-m8 AGTACAA 2L 14345615 14345621 + 2L_14345615_14345621_+ 0.643265917 0.643267551 0.643266734 1.20E-06 CG33090 FBtr0343673|FBtr0343675|FBtr0080624|FBtr0343674 14345339|14345339|14345339|14345339 14345795|14345795|14345790|14345790 2L + 14345575 14345676 3'utr CG33090 FlyBase G4610.1 TTTAAAGCCAGTCACAAATCAAACTGCTACTCTCTGTTGAAGTACAACTACGCAATGGTATTCAAATGGAGCACAAGTCGTATTTAGATGTTAGCTAAGAGA 18 14345612 0.973984384 10 18 113 1 1.342422681 0.272727273 0.166666667 0.318181818 18 0 0 22 2L:14345575-14345676 7 CG33090 FBtr0343674|FBtr0080624|FBtr0343675|FBtr0343673 14345339|14345339|14345339|14345339 14345790|14345790|14345795|14345795 AGTACAA 7mer-m8 dme-miR-305-5p 2L + 14345562 14345626 3'utr CG33090 FlyBase G3580.1 TGTCTTCTCTAGCTTTAAAGCCAGTCACAAATCAAACTGCTACTCTCTGTTGAAGTACAACTACG 6 14345612 0.983750357 4 4 32 0.8 0.903089987 0.5 0.333333333 0.6 6 2 0 8 2L:14345562-14345626 7 7.5 238 FBgn0028916 435.3333333 15.55666667 24.00333333 0.017228178 0.482108421 0.312456603 3 3 3 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 14358579 14358584 + 2L_14358579_14358584_+ 1 1 1 0 Rab14 FBtr0080627 14358182 14358764 2L + 14358560 14358592 3'utr Rab14 FlyBase G4622.1 AGATCATGTTTTTGTTGGCTGATGAATCCCTGT 12 14358575 0.748451684 2 11 113 0.923076923 1.079181246 0 0.083333333 0.153846154 12 1 0 12 2L:14358560-14358592 6 Rab14 FBtr0080627 14358182 14358764 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L + 14358540 14358590 3'utr Rab14 FlyBase G3589.1 GATGAATTCGTTTGAGATATAGATCATGTTTTTGTTGGCTGATGAATCCCT 9 14358575 0.990281418 5 8 78 0.9375 1.176091259 0.0625 0.444444444 0.6875 9 1 0 15 2L:14358540-14358590 6 10 239 FBgn0015791 1010.613333 102.9433333 157.37 0.009894981 0.097140822 0.063544513 4 4 4 0.01 dme-miR-988-3p 6mer3-8 ACAAGG 2L 14365390 14365395 + 2L_14365390_14365395_+ 1 1 1 0 spel1 FBtr0309281|FBtr0080630 14365229|14365229 14366840|14365568 2L + 14365340 14365416 5'utr spel1 FlyBase G4638.1 ACTGAATATTGCTCATCCATGGTTACAAACCATATTCTCCTGATTTGATTACAAGGCTACATCGAAAATGTTGTTTA 22 14365374 0.83156888 9 20 174 0.92 1.361727836 0.28 0.136363636 0.24 22 2 0 23 2L:14365340-14365416 6 spel1 FBtr0080630|FBtr0309281 14365229|14365229 14365568|14366840 ACAAGG 6mer3-8 dme-miR-988-3p 2L + 14365340 14365401 5'utr spel1 FlyBase G3596.1 ACTGAATATTGCTCATCCATGGTTACAAACCATATTCTCCTGATTTGATTACAAGGCTACAT 11 14365374 0.979894701 6 10 78 1 1.301029996 0.1 0.636363636 0.8 11 0 0 20 2L:14365340-14365401 6 4 240 FBgn0015546 654.7233333 24.05333333 36.85 0.006109451 0.166297118 0.108548168 16 16 16 0.01 dme-miR-980-5p 7mer-A1 AAAAACA 2L 15011367 15011373 + 2L_15011367_15011373_+ 0.782911821 0.782911824 0.782911823 0 l(2)35Bd FBtr0080696 15011357 15011764 2L + 15011326 15011418 stop_codon l(2)35Bd FlyBase G4655.1 AATGGCAAACCATTGTTCGAATTTGACGACTGATTATTGCCAAAAACATTCACGTTATAGACTATTATTCTGTACCCGTGGCTTAGCACTTTT 36 15011396 0.949183914 12 35 312 0.956521739 1.166331422 0.086956522 0.277777778 0.434782609 36 0 2 44 2L:15011326-15011418 7 l(2)35Bd FBtr0080696 15011357 15011764 AAAAACA 7mer-A1 dme-miR-980-5p 2L + 15011284 15011416 stop_codon l(2)35Bd FlyBase G3605.1 TTGGTTTGTGCCTTTAAGAAATGCAAAAACACCTGGGACACCAATGGCAAACCATTGTTCGAATTTGACGACTGATTATTGCCAAAAACATTCACGTTATAGACTATTATTCTGTACCCGTGGCTTAGCACTT 23 15011396 0.987286321 12 22 186 0.954545455 1.146128036 0.136363636 0.652173913 0.818181818 23 0 2 42 2L:15011284-15011416 7 8 241 FBgn0001974 148.6633333 10.34 15.90666667 0.053812866 0.773694391 0.50293378 -29 -29 -29 0.01 dme-miR-317-3p 8mer-A1 TGTGTTCA 2L 15011511 15011518 + 2L_15011511_15011518_+ 0.631136783 0.631136783 0.631136783 0 l(2)35Bd FBtr0080696 15011357 15011764 2L + 15011502 15011532 3'utr l(2)35Bd FlyBase G4656.1 ATGTTTGTTTGTGTTCATAGGTTTCAATTCA 45 15011510 0.73910665 3 45 557 1 1.698970004 0.08 0.111111111 0.2 45 0 0 50 2L:15011502-15011532 8 l(2)35Bd FBtr0080696 15011357 15011764 TGTGTTCA 8mer-A1 dme-miR-317-3p 2L + 15011500 15011531 3'utr l(2)35Bd FlyBase G3606.1 GTATGTTTGTTTGTGTTCATAGGTTTCAATTC 31 15011510 0.725946935 4 31 379 1 1.72427587 0.037735849 0.483870968 0.698113208 31 0 0 53 2L:15011500-15011531 8 38 242 FBgn0001974 148.6633333 10.34 15.90666667 0.255611112 3.675048356 2.388935457 1 1 1 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2L 15036518 15036520 - 2L_15036518_15036520_- 1 1 1 0 CIAPIN1 FBtr0080725 15036291 15036520 2L - 15036494 15036532 intron-3'utr CIAPIN1 FlyBase G10734.2 TTTACATTTCAGACTTGTTTAGTTACTAATTACATTTAA 13 15036514 0.619005118 6 10 127 0.722222222 1.113943352 0.333333333 0.307692308 0.5 13 5 0 13 2L:15036494-15036532 3 CIAPIN1 FBtr0080725 15036291 15036520 AAGACT 6mer3-8 dme-miR-14-3p 2L - 15036492 15036531 intron-3'utr CIAPIN1 FlyBase G8275.1 TTACATTTCAGACTTGTTTAGTTACTAATTACATTTAAAC 6 15036515 0.950625623 3 5 65 0.9 0.954242509 0 0.5 0.7 6 1 0 9 2L:15036492-15036531 3 8.5 243 FBgn0001977 734.5966667 37.76666667 57.75333333 0.011570975 0.225066196 0.147177652 -6 -5 -5.5 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 15045019 15045024 - 2L_15045019_15045024_- 1 1 1 0 ck FBtr0080724|FBtr0080723|FBtr0343687 15044961|15044961|15044961 15045413|15045413|15045413 2L - 15045016 15045043 3'utr ck FlyBase G10744.1 CCTAACTGCATATCTGTACTGATGACGT 8 15045021 0.925497486 2 8 51 1 1.041392685 0 0.375 0.545454545 8 0 0 11 2L:15045016-15045043 6 ck FBtr0080723|FBtr0343687|FBtr0080724 15044961|15044961|15044961 15045413|15045413|15045413 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L - 15044973 15045040 3'utr ck FlyBase G8282.1 AACTGCATATCTGTACTGATGACGTTTTGTATCAAATACATAGAAATGTTCAATTATTTAATAAATTA 7 15045022 0.980708503 5 7 59 1 0.84509804 0 0 0 7 0 0 7 2L:15044973-15045040 6 6 244 FBgn0000317 907.6633333 14.81666667 22.80666667 0.006610381 0.404949381 0.26308097 -3 -2 -2.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2L 15064064 15064070 - 2L_15064064_15064070_- 0.823349562 0.823349562 0.823349562 0 vig FBtr0080718|FBtr0080721 15062929|15062929 15064433|15064433 2L - 15064044 15064091 3'utr vig FlyBase G10763.1 AAGCAAGTGACCTCGTGTAAACTAGTCAGTGTCAGGCTAAGTTATCCT 10 15064069 0.795443369 5 10 62 1 1.079181246 0 0.2 0.333333333 10 0 0 12 2L:15064044-15064091 7 vig FBtr0080721|FBtr0080718 15062929|15062929 15064433|15064433 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 15064049 15064099 3'utr vig FlyBase G8290.1 TCGCGATCAAGCAAGTGACCTCGTGTAAACTAGTCAGTGTCAGGCTAAGTT 9 15064062 0.930467197 4 7 54 0.846153846 1.041392685 0.307692308 0.222222222 0.461538462 9 2 0 11 2L:15064049-15064099 7 8.5 245 FBgn0024183 3911.293333 182.2033333 280.32 0.002173194 0.046651177 0.030322489 -1 -8 -4.5 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2L 15117761 15117766 + 2L_15117761_15117766_+ 1 1 1 0 stc FBtr0080705|FBtr0332474|FBtr0332473|FBtr0080706 15117654|15117654|15117654|15117654 15118069|15118069|15118069|15118069 2L + 15117738 15117794 3'utr stc FlyBase G4678.1 TGCAAATGGAAGCCTGGATGTGGAAGACTTATTGATTGAACCTAAATGAGGAAAATT 19 15117758 0.979937767 6 18 128 1 1.301029996 0.3 0.052631579 0.1 19 0 0 20 2L:15117738-15117794 6 stc FBtr0332473|FBtr0080706|FBtr0080705|FBtr0332474 15117654|15117654|15117654|15117654 15118069|15118069|15118069|15118069 AAGACT 6mer3-8 dme-miR-14-3p 2L + 15117743 15117816 3'utr stc FlyBase G3622.1 ATGGAAGCCTGGATGTGGAAGACTTATTGATTGAACCTAAATGAGGAAAATTTTGTGGATGCGCTGCGAGGACA 13 15117770 0.700741998 10 13 78 1 1.278753601 0.210526316 0.384615385 0.578947368 13 0 0 19 2L:15117743-15117816 6 12.5 246 FBgn0001978 2544.616667 74.99333333 115.5233333 0.004912331 0.166681483 0.108203249 3 -9 -3 0.01 dme-miR-1012-3p 7mer-A1 TGACTAA 2L 15504068 15504074 + 2L_15504068_15504074_+ 0.823349562 0.823349562 0.823349562 0 lace FBtr0343735|FBtr0080738 15503914|15503914 15504591|15505018 2L + 15503931 15504149 3'utr lace FlyBase G4694.1 CATAGAAGTTAAGCTTGGGGAAATGGTAACCTCCCCGATTGGTAAACCAAAACTACAACACAGTCCAGATAGTGCTAAATCAATCACGAACGGTGGCTTACATTGACCAAGTTTCAGTTGCACTGGGCTTCTATTTATGACTAATTCTCTGGTTATATGCCTTAAAAGGGAAGATCACTACAGCAACAGAAACAAAACACTACAGCACATAGCTTAAAT 64 15504080 0.98263667 26 61 453 0.961038961 1.568201724 0.155844156 0.171875 0.311688312 64 2 1 74 2L:15503931-15504149 7 lace FBtr0343735|FBtr0080738 15503914|15503914 15504591|15505018 TGACTAA 7mer-A1 dme-miR-1012-3p 2L + 15503926 15504103 3'utr lace FlyBase G3637.1 ACACACATAGAAGTTAAGCTTGGGGAAATGGTAACCTCCCCGATTGGTAAACCAAAACTACAACACAGTCCAGATAGTGCTAAATCAATCACGAACGGTGGCTTACATTGACCAAGTTTCAGTTGCACTGGGCTTCTATTTATGACTAATTCTCTGGTTATATGCCTTAAAAGGGAAG 33 15504046 0.853527746 24 33 196 1 1.672097858 0.14893617 0.363636364 0.553191489 33 0 0 47 2L:15503926-15504103 7 12 247 FBgn0002524 4527.636667 202.88 309.75 0.002650389 0.059148265 0.03874092 -12 22 5 0.01 dme-miR-7-5p 6mer3-8 GTCTTC 2L 15504218 15504223 + 2L_15504218_15504223_+ 1 1 1 0 lace FBtr0343735|FBtr0080738 15503914|15503914 15504591|15505018 2L + 15504161 15504321 3'utr lace FlyBase G4695.1 ATTAATTATTTAGCATTTACCTCTACGTAGTTGTTATTGTATATGTAAAATCCAATCGTCTTCTTTGGTCGGCTGCTGCATTTTAAGTATTTATAGAAGAGAAAATGACAGCGCAATGTATTGGGCAAATCAGGGTTTGGTTACTTTTATAGCTAAGCTAA 77 15504226 0.843882716 21 71 628 0.936170213 1.245512668 0.308510638 0.168831169 0.319148936 77 2 4 88 2L:15504161-15504321 6 lace FBtr0343735|FBtr0080738 15503914|15503914 15504591|15505018 GTCTTC 6mer3-8 dme-miR-7-5p 2L + 15504194 15504305 3'utr lace FlyBase G3638.1 TTATTGTATATGTAAAATCCAATCGTCTTCTTTGGTCGGCTGCTGCATTTTAAGTATTTATAGAAGAGAAAATGACAGCGCAATGTATTGGGCAAATCAGGGTTTGGTTACT 54 15504226 0.919508083 19 53 414 0.989583333 1.67669361 0.229166667 0.5 0.71875 54 0 1 95 2L:15504194-15504305 6 32.5 248 FBgn0002524 4527.636667 202.88 309.75 0.007178138 0.160193218 0.104923325 -8 -8 -8 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 15646806 15646811 - 2L_15646806_15646811_- 0.755363009 0.755363009 0.755363009 0 CG4587 FBtr0344778|FBtr0344778|FBtr0344778|FBtr0344775|FBtr0344775|FBtr0344775|FBtr0344773|FBtr0344773|FBtr0344773|FBtr0344774|FBtr0344774|FBtr0344774|FBtr0344776|FBtr0344776|FBtr0344776|FBtr0344777|FBtr0344777|FBtr0344777|FBtr0344779|FBtr0344779|FBtr0344779|FBtr0344780|FBtr0344780|FBtr0344780 15644181|15644181|15644181|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15644181|15644181|15644181|15646334|15646334|15646334|15646334|15646334|15646334 15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834 2L - 15646799 15646840 3'utr CG4587 FlyBase G10811.1 TGTAATCGTTCTAATTATTTTAGACTATACTGTGAGTTCTTT 10 15646804 0.985825752 2 9 85 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 2L:15646799-15646840 6 CG4587 FBtr0344779|FBtr0344779|FBtr0344779|FBtr0344780|FBtr0344780|FBtr0344780|FBtr0344776|FBtr0344776|FBtr0344776|FBtr0344777|FBtr0344777|FBtr0344777|FBtr0344773|FBtr0344773|FBtr0344773|FBtr0344774|FBtr0344774|FBtr0344774|FBtr0344778|FBtr0344778|FBtr0344778|FBtr0344775|FBtr0344775|FBtr0344775 15646334|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15644181|15644181|15644181|15646334|15646334|15646334|15646334|15646334|15646334|15644181|15644181|15644181|15646334|15646334|15646334 15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 15646777 15646822 3'utr CG4587 FlyBase G8318.1 TTTAGACTATACTGTGAGTTCTTTACGTTTCCTTTGTTAACTTATT 6 15646804 0.988047964 3 6 57 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 2L:15646777-15646822 6 7 249 FBgn0028863 451.99 9.723333333 14.98333333 0.015487068 0.719917724 0.467185762 -7 -7 -7 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2L 15647128 15647133 - 2L_15647128_15647133_- 1 1 1 0 CG4587 FBtr0344778|FBtr0344775|FBtr0344773|FBtr0344774|FBtr0344776|FBtr0344777|FBtr0344779|FBtr0344780 15644181|15646334|15646334|15646334|15646334|15644181|15646334|15646334 15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834 2L - 15647112 15647146 3'utr CG4587 FlyBase G10812.1 ACTGAACAAATGGAAGACTTGAAATACCCGACAGC 5 15647122 0.903427731 2 4 20 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2L:15647112-15647146 6 CG4587 FBtr0344779|FBtr0344780|FBtr0344776|FBtr0344777|FBtr0344773|FBtr0344774|FBtr0344778|FBtr0344775 15646334|15646334|15646334|15644181|15646334|15646334|15644181|15646334 15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834 AAGACT 6mer3-8 dme-miR-14-3p 2L - 15647122 15647172 3'utr CG4587 FlyBase G8319.1 TTTACAACCAAAACTAAATCGAATTCACTGAACAAATGGAAGACTTGAAAT 6 15647136 0.94121709 3 5 26 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 2L:15647122-15647172 6 4.5 250 FBgn0028863 451.99 9.723333333 14.98333333 0.009955972 0.462804251 0.300333704 -11 3 -4 0.01 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 15727656 15727663 - 2L_15727656_15727663_- 0.625364919 0.625364919 0.625364919 0 CycE FBtr0080777|FBtr0080776|FBtr0080773 15727579|15727579|15727579 15728880|15728880|15728880 2L - 15727607 15727688 3'utr CycE FlyBase G10821.1 ATTTAATTTTAAATAATTTCAGAACTACGCTTATATCCATGATTTGATGTTAATAAATAAACGATCGCAAAATCGTAAACTA 23 15727663 0.975729288 8 23 158 1 1.544068044 0.028571429 0.391304348 0.6 23 0 0 35 2L:15727607-15727688 8 CycE FBtr0080776|FBtr0080773|FBtr0080777 15727579|15727579|15727579 15728880|15728880|15728880 TACGCTTA 8mer-A1 dme-miR-965-3p 2L - 15727638 15727674 3'utr CycE FlyBase G8325.1 AATTTCAGAACTACGCTTATATCCATGATTTGATGTT 9 15727663 0.960119302 4 8 60 1 0.954242509 0.111111111 0 0 9 0 0 9 2L:15727638-15727674 8 14 251 FBgn0010382 855.2666667 26.80666667 41.17666667 0.016369164 0.522258145 0.339998381 0 0 0 0.01 dme-miR-317-3p 7mer-A1 GTGTTCA 2L 15727818 15727824 - 2L_15727818_15727824_- 0.823349562 0.823349562 0.823349562 0 CycE FBtr0080775|FBtr0080777|FBtr0080774|FBtr0080776|FBtr0305561|FBtr0080773 15727782|15727579|15727782|15727579|15727782|15727579 15728880|15728880|15728880|15728880|15728880|15728880 2L - 15727797 15727852 3'utr CycE FlyBase G10822.1 CGTTAGCTTAGGCATAAATAACATGTAAGTGTTCATACGATTAAGGCTGGATTGAA 14 15727813 0.67459831 7 11 88 0.8125 0.812913357 0.0625 0.142857143 0.25 14 2 1 13 2L:15727797-15727852 7 CycE FBtr0080774|FBtr0080776|FBtr0305561|FBtr0080773|FBtr0080775|FBtr0080777 15727782|15727579|15727782|15727579|15727782|15727579 15728880|15728880|15728880|15728880|15728880|15728880 GTGTTCA 7mer-A1 dme-miR-317-3p 2L - 15727799 15727843 3'utr CycE FlyBase G8326.1 AGGCATAAATAACATGTAAGTGTTCATACGATTAAGGCTGGATTG 20 15727828 0.791528631 8 13 140 0.68 1.230448921 0.24 0.2 0.36 20 8 0 17 2L:15727799-15727843 7 15 252 FBgn0010382 855.2666667 26.80666667 41.17666667 0.01753839 0.559562298 0.36428398 -11 4 -3.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2L 15728514 15728519 - 2L_15728514_15728519_- 1 1 1 0 CycE FBtr0080775|FBtr0080777|FBtr0080774|FBtr0080776|FBtr0305561|FBtr0080773 15727782|15727579|15727782|15727579|15727782|15727579 15728880|15728880|15728880|15728880|15728880|15728880 2L - 15728499 15728582 3'utr CycE FlyBase G10825.1 TATATATACACATACACTTATAGTATAGCAGACCAGACAAAACTGAATTAACCATTAGACTAATACCTGCTGAAAAGGAGCACA 60 15728528 0.893784426 9 59 381 0.985294118 1.826074803 0.220588235 0.116666667 0.220588235 60 1 0 67 2L:15728499-15728582 6 CycE FBtr0080774|FBtr0080776|FBtr0305561|FBtr0080773|FBtr0080775|FBtr0080777 15727782|15727579|15727782|15727579|15727782|15727579 15728880|15728880|15728880|15728880|15728880|15728880 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2L - 15728500 15728581 3'utr CycE FlyBase G8328.1 ATATATACACATACACTTATAGTATAGCAGACCAGACAAAACTGAATTAACCATTAGACTAATACCTGCTGAAAAGGAGCAC 36 15728528 0.889757844 9 34 192 0.960784314 1.69019608 0.274509804 0.305555556 0.509803922 36 2 0 49 2L:15728500-15728581 6 36.5 253 FBgn0010382 855.2666667 26.80666667 41.17666667 0.042676748 1.361601592 0.88642435 9 9 9 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 15765909 15765914 + 2L_15765909_15765914_+ 1 1 1 0 CG3793 FBtr0080761|FBtr0305560 15765710|15765710 15766123|15766267 2L + 15765881 15765936 3'utr CG3793 FlyBase G4713.1 TTATCCTACACAGAGACCCACTCACAAATGATCTAATTTGTATTAATTTAGTTGTT 72 15765909 0.982706057 6 70 523 0.976470588 1.618048097 0.235294118 0.152777778 0.282352941 72 1 1 83 2L:15765881-15765936 6 CG3793 FBtr0080761|FBtr0305560 15765710|15765710 15766123|15766267 TGATCT 6mer3-8 dme-bantam-3p 2L + 15765888 15765934 3'utr CG3793 FlyBase G3654.1 ACACAGAGACCCACTCACAAATGATCTAATTTGTATTAATTTAGTTG 40 15765909 0.950972225 5 39 276 1 1.755874856 0.315789474 0.3 0.50877193 40 0 0 57 2L:15765888-15765934 6 54.5 254 FBgn0028507 251.2366667 19.03666667 29.20666667 0.216926935 2.862896165 1.866012326 0 0 0 0.01 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 2L 1594849 1594856 - 2L_1594849_1594856_- 0.625364009 0.625364009 0.625364009 0 CG31935 FBtr0077916 1594820 1595042 2L - 1594845 1594882 3'utr CG31935 FlyBase G6814.1 AATCATGCTACTCAAATTGGTGTTATTGGTGCTATGCA 48 1594857 0.784968798 6 47 417 0.982758621 1.755874856 0.224137931 0.145833333 0.293103448 48 1 0 57 2L:1594845-1594882 8 CG31935 FBtr0077916 1594820 1595042 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 2L - 1594845 1594878 3'utr CG31935 FlyBase G5325.1 ATGCTACTCAAATTGGTGTTATTGGTGCTATGCA 31 1594857 0.666701911 2 27 256 0.886363636 0.892094603 0.25 0.290322581 0.5 31 1 4 39 2L:1594845-1594878 8 39 255 FBgn0051935 254.24 10.08666667 15.46333333 0.153398364 3.866490416 2.522095279 1 1 1 0.01 dme-miR-252-5p 8mer-m1 GTACTTAG 2L 16040344 16040351 + 2L_16040344_16040351_+ 0.636789085 0.636789085 0.636789085 0 beat-Ic FBtr0343727|FBtr0080801|FBtr0343726 16039529|16039529|16039529 16041703|16040407|16041703 2L + 16040319 16040374 3'utr beat-Ic FlyBase G4730.1 GTGCTCAGTCACTGAAAATCAAAATGTACTTAGAATAAATACTATGTACTTCAAAC 11 16040343 0.96332242 3 10 64 1 1.041392685 0 0 0 11 0 0 11 2L:16040319-16040374 8 beat-Ic FBtr0343726|FBtr0080801|FBtr0343727 16039529|16039529|16039529 16041703|16040407|16041703 GTACTTAG 8mer-m1 dme-miR-252-5p 2L + 16040330 16040376 3'utr beat-Ic FlyBase G3665.1 CTGAAAATCAAAATGTACTTAGAATAAATACTATGTACTTCAAACTC 6 16040343 0.974847067 2 6 36 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2L:16040330-16040376 8 7 256 FBgn0028644 8.996666667 0.243333333 0.383333333 0.77806595 28.76712329 18.26086957 1 1 1 0.01 dme-miR-307a-3p 7mer-A1 GTTGTGA 2L 16041276 16041282 + 2L_16041276_16041282_+ 0.823332726 0.823349562 0.823341144 1.20E-05 beat-Ic FBtr0343727|FBtr0343726 16039529|16039529 16041703|16041703 2L + 16041240 16041305 3'utr beat-Ic FlyBase G4732.1 AAACTGCATGCCGCCAGATTTTTGTAATCAAATCGTGTTGTGAAAGTTGTCTTCCCTAATTTATGC 6 16041286 0.991820514 5 5 59 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2L:16041240-16041305 7 beat-Ic FBtr0343726|FBtr0343727 16039529|16039529 16041703|16041703 GTTGTGA 7mer-A1 dme-miR-307a-3p 2L + 16041264 16041288 3'utr beat-Ic FlyBase G3666.1 TAATCAAATCGTGTTGTGAAAGTTG 6 16041274 0.688689033 4 6 36 1 1.041392685 0.636363636 0.5 0.727272727 6 0 0 11 2L:16041264-16041288 7 4.5 257 FBgn0028644 8.996666667 0.243333333 0.383333333 0.500185254 18.49315068 11.73913043 -10 2 -4 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 16245846 16245851 - 2L_16245846_16245851_- 1 1 1 0 PRL-1 FBtr0332358|FBtr0080856|FBtr0080857|FBtr0332357 16245833|16245833|16245833|16245833 16247074|16247074|16247074|16247074 2L - 16245829 16245885 3'utr PRL-1 FlyBase G10852.1 TTTTAAAATGTTAGTCATTACAAGGAAATAAAAATGATCTATATTAAAATTAACCAA 108 16245851 0.839246314 10 107 690 0.992 2.093421685 0.024 0.148148148 0.264 108 1 0 124 2L:16245829-16245885 6 PRL-1 FBtr0332357|FBtr0080857|FBtr0080856|FBtr0332358 16245833|16245833|16245833|16245833 16247074|16247074|16247074|16247074 TGATCT 6mer3-8 dme-bantam-3p 2L - 16245830 16245881 3'utr PRL-1 FlyBase G8347.1 AAAATGTTAGTCATTACAAGGAAATAAAAATGATCTATATTAAAATTAACCA 69 16245851 0.848801118 6 66 436 0.966292135 1.633468456 0.078651685 0.260869565 0.426966292 69 2 1 86 2L:16245830-16245881 6 83 258 FBgn0024734 9266.433333 401.94 617.5566667 0.00895706 0.206498482 0.134400622 0 0 0 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 16246491 16246498 - 2L_16246491_16246498_- 0.500120318 0.500120318 0.500120318 0 PRL-1 FBtr0332358|FBtr0080856|FBtr0080857|FBtr0332357 16245833|16245833|16245833|16245833 16247074|16247074|16247074|16247074 2L - 16246386 16246523 3'utr PRL-1 FlyBase G10854.1 CATCTATATTCTAAAACTGTAAAATGTACTTAATCGCATATTAGTTTGAAGCTCAGCCCTCAAAAATTTGCATTATTTATATTTTGTTTTTTATCTTCTTTTCACTTCGTCCACTTTTCGCTATCAATGGGTGAAGGC 216 16246499 0.982459859 10 214 1606 0.988549618 2.413299764 0.053435115 0.171296296 0.316793893 216 3 0 259 2L:16246386-16246523 8 PRL-1 FBtr0332357|FBtr0080857|FBtr0080856|FBtr0332358 16245833|16245833|16245833|16245833 16247074|16247074|16247074|16247074 GTACTTAA 8mer-A1 dme-miR-252-5p 2L - 16246462 16246519 3'utr PRL-1 FlyBase G8350.1 TATATTCTAAAACTGTAAAATGTACTTAATCGCATATTAGTTTGAAGCTCAGCCCTCA 153 16246499 0.972799835 4 149 1111 0.980952381 1.836745966 0.052380952 0.274509804 0.471428571 153 2 2 206 2L:16246462-16246519 8 178 259 FBgn0024734 9266.433333 401.94 617.5566667 0.019209117 0.442852167 0.288232659 1 1 1 0.01 dme-miR-278-3p 6mer3-8 CCCACC 2L 16247046 16247051 - 2L_16247046_16247051_- 1 1 1 0 PRL-1 FBtr0332358|FBtr0080856|FBtr0080857|FBtr0332357 16245833|16245833|16245833|16245833 16247074|16247074|16247074|16247074 2L - 16246892 16247134 stop_codon PRL-1 FlyBase G10856.1 AAGCCAAAGGCGAGACTAAAGCACAAAAATGGTCATAAGAATTCATGTTCTGTGCAATAGATTTCCAACACCATATGTATATTCCCACCAGACAAAAAGTGTTCATTTTTTCAAAAACAAAAAAAAAAAATGCAAGCGGATAGAAAAGCGCATACACAAATATGAATTGATAGGCAGCAATCCGTAAAATTGAACTAACCACAGAGAGCCCAAAAATATGGAAGGAGAAATTGAGTTACAGCC 175 16247053 0.98599814 31 153 1335 0.874371859 1.939519253 0.08040201 0.125714286 0.231155779 175 24 1 174 2L:16246892-16247134 6 PRL-1 FBtr0332357|FBtr0080857|FBtr0080856|FBtr0332358 16245833|16245833|16245833|16245833 16247074|16247074|16247074|16247074 CCCACC 6mer3-8 dme-miR-278-3p 2L - 16247021 16247177 stop_codon PRL-1 FlyBase G8352.1 CGGAGCCATTAATGCCAAGCAGCTGTCCTTTTTGGAAAAATACAAGCCAAAGGCGAGACTAAAGCACAAAAATGGTCATAAGAATTCATGTTCTGTGCAATAGATTTCCAACACCATATGTATATTCCCACCAGACAAAAAGTGTTCATTTTTTCAA 131 16247053 0.952278126 24 105 1068 0.811428571 1.374137094 0.137142857 0.27480916 0.457142857 131 28 5 142 2L:16247021-16247177 6 114.5 260 FBgn0024734 9266.433333 401.94 617.5566667 0.012356426 0.284868388 0.185408087 2 2 2 0.01 dme-miR-307a-3p 7mer-A1 GTTGTGA 2L 16260057 16260063 - 2L_16260057_16260063_- 0.823349562 0.823349562 0.823349562 0 twe FBtr0331445|FBtr0331444|FBtr0080855|FBtr0331446 16259412|16259875|16259412|16259875 16260224|16260224|16260224|16260224 2L - 16260045 16260091 3'utr twe FlyBase G10871.1 GGTTCATTTCTTGTTGCGTTGTTCAAATGTTGTGAAAGCACTTTATA 19 16260062 0.984895325 4 19 164 1 1.361727836 0.652173913 0.210526316 0.347826087 19 0 0 23 2L:16260045-16260091 7 twe FBtr0080855|FBtr0331446|FBtr0331445|FBtr0331444 16259412|16259875|16259412|16259875 16260224|16260224|16260224|16260224 GTTGTGA 7mer-A1 dme-miR-307a-3p 2L - 16260042 16260076 3'utr twe FlyBase G8366.1 GCGTTGTTCAAATGTTGTGAAAGCACTTTATATTT 10 16260062 0.677341797 4 10 74 1 1.255272505 0.722222222 0.6 0.777777778 10 0 0 18 2L:16260042-16260076 7 14.5 261 FBgn0002673 160.84 8.683333333 13.39 0.090151704 1.669865643 1.082897685 -1 -1 -1 0.01 dme-bantam-3p 7mer-A1 GATCTCA 2L 16260161 16260167 - 2L_16260161_16260167_- 0.823349562 0.823349562 0.823349562 0 twe FBtr0331445|FBtr0331444|FBtr0080855|FBtr0331446 16259412|16259875|16259412|16259875 16260224|16260224|16260224|16260224 2L - 16260116 16260201 3'utr twe FlyBase G10872.1 TCTCGAATCGATCCACCTGCCATAAGCTCACAGAGATCTCAATGAGAAACGATGGCTGCCCAATTTTACTCATAGAATTATTTTGT 71 16260159 0.904819227 9 67 276 0.945054945 1.33243846 0.241758242 0.23943662 0.406593407 71 2 3 86 2L:16260116-16260201 7 twe FBtr0080855|FBtr0331446|FBtr0331445|FBtr0331444 16259412|16259875|16259412|16259875 16260224|16260224|16260224|16260224 GATCTCA 7mer-A1 dme-bantam-3p 2L - 16260116 16260200 3'utr twe FlyBase G8367.1 CTCGAATCGATCCACCTGCCATAAGCTCACAGAGATCTCAATGAGAAACGATGGCTGCCCAATTTTACTCATAGAATTATTTTGT 82 16260159 0.931880483 9 81 298 0.991596639 2.071882007 0.25210084 0.353658537 0.554621849 82 1 0 118 2L:16260116-16260200 7 47.5 262 FBgn0002673 160.84 8.683333333 13.39 0.295324546 5.47024952 3.54742345 -8 -8 -8 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 16263763 16263768 - 2L_16263763_16263768_- 1 1 1 0 crp FBtr0343814 16263554 16265520 2L - 16263603 16263891 3'utr crp FlyBase G10876.1 AAGTGTCCCTGCTCGGACGCCACTGTTGAGACCCGGATTTGAATTGAAGAAACTCTTCTTCGCTCAGCGCTGCCCCGCGGCTAGGCGTACCGCATTTTCCCACAAGGAGAGAGACTATGAGAATGATGAAGGATACAGCCAATGCATGCAAGGCAGCTACATTGTGTCAACCACGCCTGCTCGCCTGCTCGCCGCTCGTCCGCATTCGAAATATTTGATTAAGGAAACATTATGCAGGCCGTTCATAGTTAAAGGAAAAGAATCGTGAAGAATATATAAGCCAGATCAT 1543 16263774 0.869475913 49 1484 5951 0.960442118 2.314657086 0.038394415 0.103694102 0.195462478 1543 61 7 1651 2L:16263603-16263891 6 crp FBtr0343814 16263554 16265520 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L - 16263683 16263878 3'utr crp FlyBase G8370.1 CGGACGCCACTGTTGAGACCCGGATTTGAATTGAAGAAACTCTTCTTCGCTCAGCGCTGCCCCGCGGCTAGGCGTACCGCATTTTCCCACAAGGAGAGAGACTATGAGAATGATGAAGGATACAGCCAATGCATGCAAGGCAGCTACATTGTGTCAACCACGCCTGCTCGCCTGCTCGCCGCTCGTCCGCATTCGA 879 16263774 0.787086413 25 840 3237 0.961143695 2.214512705 0.042521994 0.406143345 0.617302053 879 46 7 1311 2L:16263683-16263878 6 1117.5 263 FBgn0001994 2020.376667 59.00666667 90.54333333 0.553114683 18.93853802 12.34215661 6 6 6 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 2L 16263929 16263934 - 2L_16263929_16263934_- 1 1 1 0 crp FBtr0343814 16263554 16265520 2L - 16263892 16264032 3'utr crp FlyBase G10877.1 CTTTCAACAAAAGAATGCGCACGTTTGAGCTAGAGGTCAATGCTGCAGCTGTCTGCCTTCGCCAAGCTGCGTCTGCGCTGTGCAATTTCAGTTTCTTCTTGACTTTGTTCAACACGTCTCATAGCTGCCAGCTAGGACACC 147 16263927 0.786876637 24 136 1139 0.951351351 1.643452676 0.064864865 0.19047619 0.356756757 147 6 3 176 2L:16263892-16264032 6 crp FBtr0343814 16263554 16265520 TTGACT 6mer3-8 dme-miR-1012-3p 2L - 16263893 16264028 3'utr crp FlyBase G8371.1 CAACAAAAGAATGCGCACGTTTGAGCTAGAGGTCAATGCTGCAGCTGTCTGCCTTCGCCAAGCTGCGTCTGCGCTGTGCAATTTCAGTTTCTTCTTGACTTTGTTCAACACGTCTCATAGCTGCCAGCTAGGACAC 87 16263927 0.98380322 19 81 630 0.95 1.755874856 0.141666667 0.298850575 0.491666667 87 5 1 114 2L:16263893-16264028 6 34.5 264 FBgn0001994 2020.376667 59.00666667 90.54333333 0.017076024 0.584679697 0.381033023 -7 -7 -7 0.01 dme-miR-2a-2-5p 7mer-m8 TGATGAG 2L 16264470 16264476 - 2L_16264470_16264476_- 0.658999343 0.658999343 0.658999343 0 crp FBtr0343814|FBtr0080854 16263554|16264419 16265520|16265520 2L - 16264445 16264573 3'utr crp FlyBase G10878.1 GTTCATAGGCGTACATTATATACTTTTGAATGGAACTTATTGAGTTTTTGTTGATATATTTGTGTAAAAAAATTTTAAGTCTAATTATGTAAGCGAGTGATGAGCGTAGGTGGTAAACATTAAACAAAG 56 16264473 0.988091356 21 52 484 0.939393939 1.491361694 0.454545455 0.160714286 0.287878788 56 3 1 62 2L:16264445-16264573 7 crp FBtr0343814|FBtr0080854 16263554|16264419 16265520|16265520 TGATGAG 7mer-m8 dme-miR-2a-2-5p 2L - 16264455 16264559 3'utr crp FlyBase G8373.1 ATTATATACTTTTGAATGGAACTTATTGAGTTTTTGTTGATATATTTGTGTAAAAAAATTTTAAGTCTAATTATGTAAGCGAGTGATGAGCGTAGGTGGTAAACA 27 16264498 0.726366758 13 25 214 0.880952381 1.267171728 0.214285714 0.222222222 0.5 27 4 1 37 2L:16264455-16264559 7 18 265 FBgn0001994 2020.376667 59.00666667 90.54333333 0.00890923 0.305050277 0.198799838 -3 22 9.5 0.01 dme-miR-283-5p 6mer3-8 TGATAT 2L 16264517 16264522 - 2L_16264517_16264522_- 1 1 1 0 crp FBtr0343814|FBtr0080854 16263554|16264419 16265520|16265520 2L - 16264445 16264573 3'utr crp FlyBase G10878.1 GTTCATAGGCGTACATTATATACTTTTGAATGGAACTTATTGAGTTTTTGTTGATATATTTGTGTAAAAAAATTTTAAGTCTAATTATGTAAGCGAGTGATGAGCGTAGGTGGTAAACATTAAACAAAG 56 16264525 0.988091356 21 52 484 0.939393939 1.491361694 0.454545455 0.160714286 0.287878788 56 3 1 62 2L:16264445-16264573 6 crp FBtr0343814|FBtr0080854 16263554|16264419 16265520|16265520 TGATAT 6mer3-8 dme-miR-283-5p 2L - 16264455 16264559 3'utr crp FlyBase G8373.1 ATTATATACTTTTGAATGGAACTTATTGAGTTTTTGTTGATATATTTGTGTAAAAAAATTTTAAGTCTAATTATGTAAGCGAGTGATGAGCGTAGGTGGTAAACA 27 16264526 0.726366758 13 25 214 0.880952381 1.267171728 0.214285714 0.222222222 0.5 27 4 1 37 2L:16264455-16264559 6 13.5 266 FBgn0001994 2020.376667 59.00666667 90.54333333 0.006681922 0.228787708 0.149099879 3 4 3.5 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 16264651 16264656 - 2L_16264651_16264656_- 0.993491771 0.999938349 0.99671506 0.004558364 crp FBtr0343814|FBtr0080854 16263554|16264419 16265520|16265520 2L - 16264597 16264701 3'utr crp FlyBase G10879.1 TTTGAACGTTGAACGAGATGCCGAAATTGTTTAAGCATGTTTAATTGATGATTCCTTGAACTCTATAAAAACCATCGCATTAATTTTTACCTTTTTTTAAATTAT 26 16264646 0.981888561 11 26 196 1 1.51851394 0.454545455 0.115384615 0.303030303 26 0 0 33 2L:16264597-16264701 6 crp FBtr0343814|FBtr0080854 16263554|16264419 16265520|16265520 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L - 16264603 16264666 3'utr crp FlyBase G8374.1 CATGTTTAATTGATGATTCCTTGAACTCTATAAAAACCATCGCATTAATTTTTACCTTTTTTTA 13 16264645 0.97451474 6 12 120 0.928571429 1.113943352 0.214285714 0.076923077 0.142857143 13 1 0 13 2L:16264603-16264666 6 13 267 FBgn0001994 2020.376667 59.00666667 90.54333333 0.006434444 0.220314089 0.143577661 -10 -11 -10.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2L 16265188 16265193 - 2L_16265188_16265193_- 1 1 1 0 crp FBtr0343814|FBtr0080854 16263554|16264419 16265520|16265520 2L - 16265152 16265242 3'utr crp FlyBase G10884.1 TAGTAGCATCATCAGCAGCAGCAGCCACAGAAATGTTAAAGAGACTGTTACCAAACAGAGGCAGAGGCAAAAGAATGTAAATTAGTAAGAG 54 16265195 0.865602634 10 53 219 0.985294118 1.525044807 0.117647059 0.203703704 0.367647059 54 0 1 67 2L:16265152-16265242 6 crp FBtr0343814|FBtr0080854 16263554|16264419 16265520|16265520 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 16265146 16265265 3'utr crp FlyBase G8375.1 AACCTTATTGTAAGCAGTAAAACTAGTAGCATCATCAGCAGCAGCAGCCACAGAAATGTTAAAGAGACTGTTACCAAACAGAGGCAGAGGCAAAAGAATGTAAATTAGTAAGAGTTTAAC 48 16265195 0.95831287 10 44 215 0.9375 1.301029996 0.15625 0.270833333 0.453125 48 2 2 60 2L:16265146-16265265 6 39 268 FBgn0001994 2020.376667 59.00666667 90.54333333 0.019303331 0.660942266 0.430732982 2 2 2 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 2L 16290916 16290922 + 2L_16290916_16290922_+ 0.782911824 0.782911824 0.782911824 0 pkaap FBtr0080826 16290778 16291195 2L + 16290875 16290957 3'utr pkaap FlyBase G4749.1 AGAAGTCGCAACAGAAGCTCTCTCTAGTACCCTCTCCTTATGTACAAATTGTGTTGAACAAATCAAATACTTTACTTTAACTT 30 16290914 0.98682668 10 29 249 0.972972973 1.255272505 0.081081081 0.166666667 0.324324324 30 0 1 36 2L:16290875-16290957 7 pkaap FBtr0080826 16290778 16291195 GTACAAA 7mer-A1 dme-miR-305-5p 2L + 16290878 16290942 3'utr pkaap FlyBase G3682.1 AGTCGCAACAGAAGCTCTCTCTAGTACCCTCTCCTTATGTACAAATTGTGTTGAACAAATCAAAT 31 16290914 0.98586447 9 30 254 0.976190476 1.311753861 0.357142857 0.258064516 0.452380952 31 0 1 41 2L:16290878-16290942 7 26.5 269 FBgn0040079 291.3133333 14.45 22.03666667 0.090967343 1.833910035 1.202541219 2 2 2 0.01 dme-miR-932-5p 6mer2-7 GAATTG 2L 16296080 16296085 - 2L_16296080_16296085_- 0.989222759 1 0.994611379 0.007620631 heix FBtr0080852 16296049 16297554 2L - 16296060 16296202 3'utr heix FlyBase G10900.1 TAACCGAGTGGAATTGAACTAAGTGAAAACTTCGTAGACTACAAATCAACAACCAGATGAACAATAATAATTATAATGCTATTGATAATTAAATGTTTAATTAGACAATGTAAACGAGAATTGTGTAATATAAACTGATTTAT 35 16296081 0.994806867 13 34 196 0.975609756 1.301029996 0.12195122 0.171428571 0.292682927 35 0 1 40 2L:16296060-16296202 6 heix FBtr0080852 16296049 16297554 GAATTG 6mer2-7 dme-miR-932-5p 2L - 16296065 16296093 3'utr heix FlyBase G8386.1 GTAAACGAGAATTGTGTAATATAAACTGA 6 16296082 0.934527011 3 6 31 1 0.903089987 0.375 0.333333333 0.5 6 0 0 8 2L:16296065-16296093 6 8 270 FBgn0028375 808.1233333 31.42 48.33666667 0.009899479 0.254614895 0.165505827 -4 -3 -3.5 0.01 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 16296371 16296378 - 2L_16296371_16296378_- 0.625364009 0.625364009 0.625364009 0 heix FBtr0080852 16296049 16297554 2L - 16296364 16296398 3'utr heix FlyBase G10902.1 AGCGTATGCATATAAACAAATAGCTTTAAATAACA 8 16296378 0.865181327 2 6 49 0.75 0.77815125 0 0 0 8 2 0 6 2L:16296364-16296398 8 heix FBtr0080852 16296049 16297554 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 16296360 16296401 3'utr heix FlyBase G8388.1 AATAGCGTATGCATATAAACAAATAGCTTTAAATAACAAACA 10 16296378 0.902756392 2 9 55 0.909090909 0.698970004 0 0.1 0.181818182 10 0 1 10 2L:16296360-16296401 8 9 271 FBgn0028375 808.1233333 31.42 48.33666667 0.011136914 0.286441757 0.186194056 0 0 0 0.01 dme-miR-33-5p 6mer2-7 AATGCA 2L 16296725 16296730 - 2L_16296725_16296730_- 1 1 1 0 heix FBtr0080852 16296049 16297554 2L - 16296717 16296746 3'utr heix FlyBase G10904.1 AAGTTTCGCGAATCAAAATGCAGATTTACT 5 16296742 0.786109469 4 5 32 1 0.77815125 0.5 0.2 0.333333333 5 0 0 6 2L:16296717-16296746 6 heix FBtr0080852 16296049 16297554 AATGCA 6mer2-7 dme-miR-33-5p 2L - 16296712 16296746 3'utr heix FlyBase G8389.1 AAGTTTCGCGAATCAAAATGCAGATTTACTTTATG 6 16296734 0.826028147 3 5 40 0.8 0.903089987 0.1 0.666666667 0.8 6 2 0 8 2L:16296712-16296746 6 5.5 272 FBgn0028375 808.1233333 31.42 48.33666667 0.006805892 0.17504774 0.113785256 12 4 8 0.01 dme-miR-190-5p 7mer-m8 ACATATC 2L 16297344 16297350 - 2L_16297344_16297350_- 0.674514898 0.674514898 0.674514898 0 heix FBtr0080852 16296049 16297554 2L - 16297328 16297398 3'utr heix FlyBase G10905.1 ATTTCGAATGCTGCTAGTCGCCCGTTTGATTCTAAACTTTTGAACTGAACATATCCTAGCCCTAATGGGTC 15 16297342 0.864212075 6 15 92 1 1.278753601 0.052631579 0.266666667 0.421052632 15 0 0 19 2L:16297328-16297398 7 heix FBtr0080852 16296049 16297554 ACATATC 7mer-m8 dme-miR-190-5p 2L - 16297326 16297387 3'utr heix FlyBase G8390.1 TGCTAGTCGCCCGTTTGATTCTAAACTTTTGAACTGAACATATCCTAGCCCTAATGGGTCGA 9 16297343 0.820352521 4 7 65 1 1.204119983 0.0625 0.555555556 0.75 9 0 0 16 2L:16297326-16297387 7 8.5 273 FBgn0028375 808.1233333 31.42 48.33666667 0.010518196 0.270528326 0.175849941 -8 -7 -7.5 0.01 dme-miR-31a-5p 7mer-A1 CTTGCCA 2L 16301756 16301762 - 2L_16301756_16301762_- 0.823349562 0.598584094 0.710966828 0.158933209 CG5869 FBtr0080851 16301654 16302076 2L - 16301720 16301781 3'utr CG5869 FlyBase G10913.1 AATCTTAATAGAAGCTGTGCTTGCCAAATTTCTACATGTATTTATTGTAAAGATATAAAAGC 16 16301760 0.723374332 9 16 117 1 1.397940009 0.04 0.375 0.6 16 0 0 25 2L:16301720-16301781 7 CG5869 FBtr0080851 16301654 16302076 CTTGCCA 7mer-A1 dme-miR-31a-5p 2L - 16301741 16301819 3'utr CG5869 FlyBase G8394.1 GGAGTTTTTAGTGATTTTAGTTCTTGCATTTAAGTAATAATCTTAATAGAAGCTGTGCTTGCCAAATTTCTACATGTAT 14 16301760 0.772567062 7 14 130 1 1.342422681 0.181818182 0.428571429 0.636363636 14 0 0 22 2L:16301741-16301819 7 10 274 FBgn0028894 1010.62 123.5733333 189.1366667 0.009894916 0.080923608 0.052871821 -2 -2 -2 0.01 dme-bantam-3p 6mer2-7 GATCTC 2L 16302062 16302067 - 2L_16302062_16302067_- 1 1 1 0 CG5869 FBtr0080851 16301654 16302076 2L - 16302032 16302133 stop_codon CG5869 FlyBase G10914.2 GAGATACGCGAACTAGACGAACTCACCGAGGAGTGGCTGAAAGCCAAGCTCAAGTAGAGAGGTTTCGATCTCTGGGATCAATCAATCCGGGCCGTTGTCAAA 92 16302061 0.948172567 10 87 525 0.939130435 1.556302501 0.4 0.239130435 0.391304348 92 5 2 108 2L:16302032-16302133 6 CG5869 FBtr0080851 16301654 16302076 GATCTC 6mer2-7 dme-bantam-3p 2L - 16302028 16302167 stop_codon CG5869 FlyBase G8396.1 TCTTCAGCGCGAAGTAGATCTCACACGCGTCTACGAGATACGCGAACTAGACGAACTCACCGAGGAGTGGCTGAAAGCCAAGCTCAAGTAGAGAGGTTTCGATCTCTGGGATCAATCAATCCGGGCCGTTGTCAAAAGCA 88 16302061 0.97275659 11 85 478 0.96350365 2.120573931 0.284671533 0.409090909 0.620437956 88 5 0 132 2L:16302028-16302167 6 66 275 FBgn0028894 1010.62 123.5733333 189.1366667 0.065306446 0.534095814 0.348954019 -6 -6 -6 0.01 dme-miR-304-5p 7mer-m8 TGAGATT 2L 16305881 16305887 - 2L_16305881_16305887_- 0.620203442 0.620203442 0.620203442 0 CG5861 FBtr0080850 16305799 16305958 2L - 16305848 16305907 3'utr CG5861 FlyBase G10918.1 TTTGGTGTTGTCAGAGAAATTGAGATTTTGTAACAAAGACAACAATTACGGTTTAGAGAA 19 16305887 0.826703406 6 18 135 1 1.431363764 0.37037037 0.315789474 0.518518519 19 0 0 27 2L:16305848-16305907 7 CG5861 FBtr0080850 16305799 16305958 TGAGATT 7mer-m8 dme-miR-304-5p 2L - 16305874 16305904 3'utr CG5861 FlyBase G8398.1 GGTGTTGTCAGAGAAATTGAGATTTTGTAAC 5 16305888 0.800498582 2 5 45 1 0.84509804 0.571428571 0.4 0.571428571 5 0 0 7 2L:16305874-16305904 7 9.5 276 FBgn0015338 312.2366667 33.98666667 51.41 0.030425639 0.279521381 0.184788952 0 1 0.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 16309163 16309168 + 2L_16309163_16309168_+ 1 1 1 0 Syx5 FBtr0080832|FBtr0080831 16309130|16309130 16309274|16309274 2L + 16309123 16309197 stop_codon Syx5 FlyBase G4760.1 ATGTCGTAATCAAACGCCAGTTGCCCATTAAAAGCCCCATGTACCTATCCATGTATACAGCTTTTTATTTTAATC 22 16309162 0.960240976 6 22 110 1 1.414973348 0 0.181818182 0.307692308 22 0 0 26 2L:16309123-16309197 6 Syx5 FBtr0080832|FBtr0080831 16309130|16309130 16309274|16309274 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 16309136 16309183 3'utr Syx5 FlyBase G3691.1 ACGCCAGTTGCCCATTAAAAGCCCCATGTACCTATCCATGTATACAGC 16 16309162 0.953664802 2 14 60 1 1.278753601 0.052631579 0.266666667 0.421052632 15 0 0 19 2L:16309136-16309183 6 17 277 FBgn0011708 839 57.82 88.43666667 0.020262217 0.294015911 0.19222796 1 1 1 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2L 16309761 16309766 - 2L_16309761_16309766_- 1 1 1 0 cni FBtr0080848|FBtr0080849|FBtr0337082 16309594|16309594|16309290 16309902|16309902|16309902 2L - 16309728 16309781 3'utr cni FlyBase G10925.1 ACTTCACTTGTAAATTCTAGTGTAAATCCATAAAGACATCTTGAAGCTTTGTTT 14 16309767 0.986721575 4 14 120 1 1.255272505 0 0.285714286 0.444444444 14 0 0 18 2L:16309728-16309781 6 cni FBtr0080849|FBtr0337082|FBtr0080848 16309594|16309290|16309594 16309902|16309902|16309902 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2L - 16309729 16309776 3'utr cni FlyBase G8401.1 ACTTGTAAATTCTAGTGTAAATCCATAAAGACATCTTGAAGCTTTGTT 12 16309767 0.784609783 4 12 93 1 1.204119983 0 0.333333333 0.5 12 0 0 16 2L:16309729-16309776 6 10.5 278 FBgn0000339 410.67 56.70333333 85.98333333 0.025567974 0.185174299 0.122116689 1 1 1 0.01 dme-bantam-3p 7mer-A1 GATCTCA 2L 16309879 16309885 - 2L_16309879_16309885_- 0.823349562 0.823349562 0.823349562 0 cni FBtr0080848|FBtr0080849|FBtr0337082 16309594|16309594|16309290 16309902|16309902|16309902 2L - 16309857 16309924 stop_codon cni FlyBase G10926.1 TTATTCGCTCATCTCGACATAGGCAAGCTCTTGCCTGGGGATCTCAGTGTTGGCGCCAACGCATCAGC 32 16309877 0.98253826 7 29 219 0.891891892 1.51851394 0.081081081 0.15625 0.27027027 32 4 0 33 2L:16309857-16309924 7 cni FBtr0080849|FBtr0337082|FBtr0080848 16309594|16309290|16309594 16309902|16309902|16309902 GATCTCA 7mer-A1 dme-bantam-3p 2L - 16309861 16309919 stop_codon cni FlyBase G8402.1 CGCTCATCTCGACATAGGCAAGCTCTTGCCTGGGGATCTCAGTGTTGGCGCCAACGCAT 33 16309877 0.919761546 5 31 218 0.962962963 1.414973348 0.018518519 0.545454545 0.722222222 33 1 1 52 2L:16309861-16309919 7 28 279 FBgn0000339 410.67 56.70333333 85.98333333 0.068181265 0.493798131 0.325644505 -8 -8 -8 0.01 dme-miR-305-3p 7mer-m8 ATGTGCC 2L 16312998 16313004 + 2L_16312998_16313004_+ 0.674515655 0.674515655 0.674515655 0 fzy FBtr0080833 16312826 16313097 2L + 16312976 16313019 3'utr fzy FlyBase G4772.1 AATTACGGATAAATCTCTGATTATGTGCCCCCGCCGACGATATA 7 16312992 0.979340395 4 6 46 0.888888889 0.903089987 0.222222222 0.142857143 0.333333333 7 1 0 8 2L:16312976-16313019 7 fzy FBtr0080833 16312826 16313097 ATGTGCC 7mer-m8 dme-miR-305-3p 2L + 16312969 16313021 3'utr fzy FlyBase G3699.1 ACTTTGTAATTACGGATAAATCTCTGATTATGTGCCCCCGCCGACGATATATG 8 16312994 0.972907743 6 7 45 1 0.954242509 0.333333333 0.125 0.222222222 8 0 0 9 2L:16312969-16313021 7 5.5 280 FBgn0001086 1113.016667 67.49 102.82 0.004941525 0.081493555 0.053491539 6 4 5 0.01 dme-miR-252-5p 7mer-m8 GTACTTA 2L 16313186 16313192 - 2L_16313186_16313192_- 0.588299917 0.588299917 0.588299917 0 cact FBtr0337081|FBtr0080844|FBtr0080845|FBtr0080847 16313095|16313095|16313034|16313095 16313378|16313378|16313378|16313378 2L - 16313141 16313216 3'utr cact FlyBase G10928.1 TGCATCCAGGAAATGGAACCTTATGTACTTACTGTCCCGGCACGTGGGAATCCGAAACGAATAGAATTCCTTGTGT 120 16313193 0.983688937 6 118 919 0.985815603 2.1430148 0.14893617 0.166666667 0.290780142 120 2 0 139 2L:16313141-16313216 7 cact FBtr0080847|FBtr0337081|FBtr0080844|FBtr0080845 16313095|16313095|16313095|16313034 16313378|16313378|16313378|16313378 GTACTTA 7mer-m8 dme-miR-252-5p 2L - 16313166 16313209 3'utr cact FlyBase G8404.1 AGGAAATGGAACCTTATGTACTTACTGTCCCGGCACGTGGGAAT 68 16313193 0.723457135 4 64 523 0.949494949 1.973127854 0.212121212 0.352941176 0.555555556 68 5 0 94 2L:16313166-16313209 7 92 281 FBgn0000250 1526.01 89.34 137.2866667 0.06028794 1.029773897 0.670130627 1 1 1 0.01 dme-miR-980-5p 7mer-m1 AAAAACT 2L 16314340 16314346 - 2L_16314340_16314346_- 0.765586663 0.765586663 0.765586663 0 cact FBtr0080846 16313683 16314432 2L - 16314306 16314434 stop_codon cact FlyBase G10931.1 AAGAACATGTACCAAGAAAAGATCACTGCGATCGCGTAGAGCGTAAGACACAATTTGAAATGGGCCACCACCAGCTTCCAAAATGTTCAAAAACTAAGTAAGAGAGGAGAAGAGAAGTACCCAGCTGAA 57 16314359 0.961071341 14 52 252 0.919354839 1.45484486 0.241935484 0.052631579 0.129032258 57 4 1 57 2L:16314306-16314434 7 cact FBtr0080846 16313683 16314432 AAAAACT 7mer-m1 dme-miR-980-5p 2L - 16314340 16314447 stop_codon cact FlyBase G8407.1 AGCGTCACTGCTTAAGAACATGTACCAAGAAAAGATCACTGCGATCGCGTAGAGCGTAAGACACAATTTGAAATGGGCCACCACCAGCTTCCAAAATGTTCAAAAACT 37 16314359 0.830120442 10 31 153 0.849056604 1.176091259 0.20754717 0.351351351 0.547169811 37 6 2 45 2L:16314340-16314447 6 25 282 FBgn0000250 1526.01 89.34 137.2866667 0.016382593 0.279829863 0.182100714 13 13 13 0.01 dme-miR-986-5p 6mer3-8 ATTCGA 2L 16342555 16342560 - 2L_16342555_16342560_- 1 1 1 0 CG42231 FBtr0273183 16342428 16342605 2L - 16342492 16342565 3'utr CG42231 FlyBase G10942.1 ACTTCATTCGATTCCGCTGAACTGCAGTGATTACTCACACTTATTTATACTTGTATCCATTCTTAACTCATCAT 33 16342535 0.978404747 10 32 220 0.931818182 1.612783857 0.25 0.242424242 0.431818182 33 3 0 41 2L:16342492-16342565 6 CG42231 FBtr0273183 16342428 16342605 ATTCGA 6mer3-8 dme-miR-986-5p 2L - 16342517 16342558 3'utr CG42231 FlyBase G8416.1 TCGATTCCGCTGAACTGCAGTGATTACTCACACTTATTTATA 18 16342536 0.652760935 5 17 110 1 1.447158031 0.321428571 0.388888889 0.607142857 18 0 0 28 2L:16342517-16342558 4 8.5 283 FBgn0087041 239.1333333 19.58333333 30.12333333 0.035545024 0.434042553 0.282173288 -25 -24 -24.5 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2L 16353615 16353620 + 2L_16353615_16353620_+ 1 1 1 0 CG4455 FBtr0080836 16353552 16354539 2L + 16353567 16353678 3'utr CG4455 FlyBase G4780.2 CACCTGGAGGATAGTGGTTTAGTAGTACTTCAATTTAGTAACGCGAAAAAGACTTAAATGCCAGCCAGAAACGAAAACCCATTAGTATGACTACAGATTTAGGTCCTAAGTT 43 16353625 0.976963338 12 42 167 1 1.73239376 0.148148148 0.209302326 0.37037037 43 0 0 54 2L:16353567-16353678 6 CG4455 FBtr0080836 16353552 16354539 AAGACT 6mer3-8 dme-miR-14-3p 2L + 16353603 16353678 3'utr CG4455 FlyBase G3704.1 AGTAACGCGAAAAAGACTTAAATGCCAGCCAGAAACGAAAACCCATTAGTATGACTACAGATTTAGGTCCTAAGTT 38 16353625 0.967973034 7 38 96 1 1.73239376 0.203703704 0.263157895 0.481481481 38 0 0 54 2L:16353603-16353678 6 30 284 FBgn0028506 237.38 18.83333333 28.63666667 0.126379644 1.592920354 1.047607962 -10 -10 -10 0.01 dme-miR-184-3p 6mer2-7 CCGTCC 2L 16354263 16354268 + 2L_16354263_16354268_+ 1 1 1 0 CG4455 FBtr0080836 16353552 16354539 2L + 16354168 16354436 3'utr CG4455 FlyBase G4781.1 ACGCAACCCAATTTGCATTAAGAATCCGAATCGTACTAACAGACGAACTCTTCGTGATGCCTCGAATTTTGCACTACATTTTAAAACGCCGATTCCCGTCCCTTTATATACACAGGTTGTACTTAAATCGAAACCAAGTACTTAATAATTGTACCATGCCAATCATAGTTTAAGCGCCAATCTGCCGCCACGAATACATTTAAGAAATCTTCAGTTTGTGCATTTAGACCAGCATGAGTATCCTTCTATATATTGTGTCAAAAAAAACG 505 16354260 0.976422367 41 484 3115 0.953895072 1.93305321 0.06200318 0.194059406 0.352941176 505 23 6 600 2L:16354168-16354436 6 CG4455 FBtr0080836 16353552 16354539 CCGTCC 6mer2-7 dme-miR-184-3p 2L + 16354204 16354396 3'utr CG4455 FlyBase G3707.1 TAACAGACGAACTCTTCGTGATGCCTCGAATTTTGCACTACATTTTAAAACGCCGATTCCCGTCCCTTTATATACACAGGTTGTACTTAAATCGAAACCAAGTACTTAATAATTGTACCATGCCAATCATAGTTTAAGCGCCAATCTGCCGCCACGAATACATTTAAGAAATCTTCAGTTTGTGCATTTAGAC 352 16354260 0.914340584 26 330 2000 0.940839695 1.613665673 0.041984733 0.372159091 0.578244275 352 20 11 493 2L:16354204-16354396 6 303.5 285 FBgn0028506 237.38 18.83333333 28.63666667 1.278540736 16.11504425 10.59830055 3 3 3 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2L 16400240 16400245 - 2L_16400240_16400245_- 1 1 1 0 CG5888 FBtr0340234|FBtr0080880 16400173|16400173 16400500|16400500 2L - 16400198 16400378 3'utr CG5888 FlyBase G10973.1 CTTAAAATTAATACTCCCATATATGTTCACCTGCTAAGTATCTTTTGAAATATAACACGATTTGTATCTTTAGTGTAAAAGTTTTGAAATAGTTGCTATCATTAAAGACTATAATTTTATGTTTGCTGATTGTAAGACTATAAAATCGAAAAGTTGGAAATATTACTGTATCAATAAACTT 80 16400248 0.988673082 27 74 699 0.91 1.959041392 0.2 0.2 0.36 80 9 0 91 2L:16400198-16400378 6 CG5888 FBtr0340234|FBtr0080880 16400173|16400173 16400500|16400500 AAGACT 6mer3-8 dme-miR-14-3p 2L - 16400220 16400286 3'utr CG5888 FlyBase G8435.1 TTGCTATCATTAAAGACTATAATTTTATGTTTGCTGATTGTAAGACTATAAAATCGAAAAGTTGGAA 20 16400248 0.968553142 7 18 148 0.862068966 1.397940009 0.551724138 0.35 0.551724138 20 4 0 25 2L:16400220-16400286 6 22.5 286 FBgn0028523 337.3833333 21.57333333 32.72 0.06668972 1.042954265 0.687652812 3 3 3 0.01 dme-miR-304-5p 8mer-A1 TGAGATTA 2L 16400411 16400418 - 2L_16400411_16400418_- 0.625363359 0.625363359 0.625363359 0 CG5888 FBtr0340234|FBtr0080880 16400173|16400173 16400500|16400500 2L - 16400395 16400440 3'utr CG5888 FlyBase G10974.1 TAGCTTATTTCTGAGACTATAATGAGATTAAAATAGGCTGAAGCTA 102 16400407 0.811007327 10 90 550 0.889830508 1.176091259 0.355932203 0.12745098 0.245762712 102 7 6 105 2L:16400395-16400440 8 CG5888 FBtr0340234|FBtr0080880 16400173|16400173 16400500|16400500 TGAGATTA 8mer-A1 dme-miR-304-5p 2L - 16400395 16400440 3'utr CG5888 FlyBase G8437.1 TAGCTTATTTCTGAGACTATAATGAGATTAAAATAGGCTGAAGCTA 71 16400407 0.764266672 8 66 350 0.921568627 1.194976603 0.450980392 0.352112676 0.549019608 71 3 5 94 2L:16400395-16400440 8 82.5 287 FBgn0028523 337.3833333 21.57333333 32.72 0.244528973 3.824165637 2.521393643 -11 -11 -11 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 16508405 16508410 - 2L_16508405_16508410_- 1 0.999995237 0.999997618 3.39E-06 CG5953 FBtr0337091 16508076 16510135 2L - 16508374 16508457 3'utr CG5953 FlyBase G10983.1 TAGTTAGTCACATAAACGAGAGAAAGAGATAGCTGGTTAGTTGAGGATGATGAAATGCAGTTCGGCTTTTGCTGCTGCGTTTTT 56 16508424 0.746316233 13 55 259 0.986111111 1.851258349 0.069444444 0.214285714 0.388888889 56 1 0 71 2L:16508374-16508457 6 CG5953 FBtr0337091 16508076 16510135 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L - 16508377 16508474 3'utr CG5953 FlyBase G8445.1 ATAAAATATGGGCAAATTAGTTAGTCACATAAACGAGAGAAAGAGATAGCTGGTTAGTTGAGGATGATGAAATGCAGTTCGGCTTTTGCTGCTGCGTT 48 16508424 0.953337647 8 48 217 1 1.838849091 0.057971014 0.3125 0.52173913 48 0 0 69 2L:16508377-16508474 6 15 288 FBgn0032587 1367.886667 37.83 57.85 0.010965821 0.396510706 0.259291271 14 14 14 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 16508867 16508872 - 2L_16508867_16508872_- 1 1 1 0 CG5953 FBtr0337091 16508076 16510135 2L - 16508848 16508895 3'utr CG5953 FlyBase G10985.1 AAAAATATATAATATATATCATTGTACCTTATTTTGAAACAGAGATGT 37 16508873 0.93267216 6 35 410 0.957446809 1.352182518 0 0.216216216 0.382978723 37 1 1 45 2L:16508848-16508895 6 CG5953 FBtr0337091 16508076 16510135 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L - 16508845 16508893 3'utr CG5953 FlyBase G8448.1 AAATATATAATATATATCATTGTACCTTATTTTGAAACAGAGATGTTTT 18 16508873 0.696121129 3 18 203 1 1.380211242 0 0.277777778 0.458333333 18 0 0 24 2L:16508845-16508893 6 27 289 FBgn0032587 1367.886667 37.83 57.85 0.019738477 0.71371927 0.466724287 1 1 1 0.01 dme-miR-8-3p 8mer-A1 CAGTATTA 2L 16509284 16509291 - 2L_16509284_16509291_- 0.671698124 0.671698124 0.671698124 0 CG5953 FBtr0337091|FBtr0301144|FBtr0080874|FBtr0080873 16508076|16509118|16509118|16509118 16510135|16510135|16510135|16510135 2L - 16509203 16509310 3'utr CG5953 FlyBase G10987.1 CGTCTAACTAGCAGAATCTCAGTATTAACTATAAAATACACTTTACATAGGGATCCAAGCATTTGCCATAGATCGTTTCCTTTGGGGCCCGATCGTCCACTTCTGGGT 29 16509292 0.986117033 8 24 210 0.833333333 1.397940009 0.2 0.034482759 0.066666667 29 5 0 25 2L:16509203-16509310 8 CG5953 FBtr0080874|FBtr0080873|FBtr0337091|FBtr0301144 16509118|16509118|16508076|16509118 16510135|16510135|16510135|16510135 CAGTATTA 8mer-A1 dme-miR-8-3p 2L - 16509272 16509313 3'utr CG5953 FlyBase G8451.1 AGACGTCTAACTAGCAGAATCTCAGTATTAACTATAAAATAC 20 16509292 0.781826373 4 19 127 0.961538462 1.397940009 0.153846154 0.25 0.423076923 20 1 0 25 2L:16509272-16509313 8 18 290 FBgn0032587 1367.886667 37.83 57.85 0.013158985 0.475812847 0.311149525 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2L 16509468 16509474 - 2L_16509468_16509474_- 0.671796082 0.671796082 0.671796082 0 CG5953 FBtr0337091|FBtr0301144|FBtr0080874|FBtr0080873 16508076|16509118|16509118|16509118 16510135|16510135|16510135|16510135 2L - 16509440 16509503 3'utr CG5953 FlyBase G10988.2 AAACACAAAAACCACAATATAGAACACAAACCAAAGTTACTTTCTATTCTGTTCGAAGGGCTGC 51 16509467 0.972894093 4 48 267 0.983333333 1.770852012 0.033333333 0.156862745 0.283333333 51 1 0 59 2L:16509440-16509503 7 CG5953 FBtr0080874|FBtr0080873|FBtr0337091|FBtr0301144 16509118|16509118|16508076|16509118 16510135|16510135|16510135|16510135 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 16509446 16509496 3'utr CG5953 FlyBase G8452.3 AAAACCACAATATAGAACACAAACCAAAGTTACTTTCTATTCTGTTCGAAG 37 16509467 0.908297506 3 35 147 0.981818182 1.73239376 0.054545455 0.324324324 0.545454545 37 1 0 54 2L:16509446-16509496 7 40 291 FBgn0032587 1367.886667 37.83 57.85 0.029242189 1.057361882 0.691443388 -7 -7 -7 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 2L 16509900 16509906 - 2L_16509900_16509906_- 0.782911824 0.782911824 0.782911824 0 CG5953 FBtr0337091|FBtr0301144|FBtr0080874|FBtr0080873 16508076|16509118|16509118|16509118 16510135|16510135|16510135|16510135 2L - 16509865 16510035 3'utr CG5953 FlyBase G10990.1 GGAGCCTTCTCGCCCCGCAGCATGGCAAGTGAATTCCATTTGATGAAATAGTCGACAGAGAGTAGTAGGCAAATACAGAGAACACAGTACAACTTATTTTTAGTTTGGCCAGGATCGGGGTCACCACTTGTACAAAGCTTGGCTTGAACGGGGGCAGTGTTACTTAGCCGG 95 16509908 0.970790249 16 86 518 0.880733945 1.681241237 0.330275229 0.126315789 0.23853211 95 12 1 96 2L:16509865-16510035 7 CG5953 FBtr0080874|FBtr0080873|FBtr0337091|FBtr0301144 16509118|16509118|16508076|16509118 16510135|16510135|16510135|16510135 GTACAAA 7mer-A1 dme-miR-305-5p 2L - 16509860 16510034 3'utr CG5953 FlyBase G8456.1 GAGCCTTCTCGCCCCGCAGCATGGCAAGTGAATTCCATTTGATGAAATAGTCGACAGAGAGTAGTAGGCAAATACAGAGAACACAGTACAACTTATTTTTAGTTTGGCCAGGATCGGGGTCACCACTTGTACAAAGCTTGGCTTGAACGGGGGCAGTGTTACTTAGCCGGAAAGA 66 16509908 0.972483331 18 59 356 0.899082569 1.991226076 0.330275229 0.46969697 0.678899083 66 11 0 98 2L:16509860-16510034 7 45.5 292 FBgn0032587 1367.886667 37.83 57.85 0.03326299 1.202749141 0.786516854 2 2 2 0.01 dme-miR-2a-2-5p 7mer-A1 GATGAGA 2L 16662062 16662068 + 2L_16662062_16662068_+ 0.782911824 0.782911824 0.782911824 0 CG42389 FBtr0335497 16661777 16663218 2L + 16662039 16662083 3'utr CG42389 FlyBase G4872.1 GGAAAGTGGAATAGAGAAGGAGAGATGAGAAGGCAAAACCCCATT 18 16662064 0.713627686 3 16 11 0.818181818 1.255272505 0.045454545 0.166666667 0.318181818 18 4 0 18 2L:16662039-16662083 7 CG42389 FBtr0335497 16661777 16663218 GATGAGA 7mer-A1 dme-miR-2a-2-5p 2L + 16662023 16662083 3'utr CG42389 FlyBase G3795.1 AAAAAAAAAATGGAATGGAAAGTGGAATAGAGAAGGAGAGATGAGAAGGCAAAACCCCATT 17 16662064 0.936852329 4 17 26 1 1.505149978 0.3125 0.529411765 0.75 17 0 0 32 2L:16662023-16662083 7 15.5 293 FBgn0259735 3930.076667 62.35333333 96.36 0.003943943 0.248583342 0.160855127 -2 -2 -2 0.01 dme-miR-965-3p 6mer2-7 ACGCTT 2L 16662724 16662729 + 2L_16662724_16662729_+ 1 1 1 0 CG42389 FBtr0335497 16661777 16663218 2L + 16662710 16662741 3'utr CG42389 FlyBase G4879.1 ATGTAAAACAGCAGACGCTTCTTTCATTCTCA 20 16662731 0.620196093 2 20 110 1 1.397940009 0 0.2 0.36 20 0 0 25 2L:16662710-16662741 6 CG42389 FBtr0335497 16661777 16663218 ACGCTT 6mer2-7 dme-miR-965-3p 2L + 16662710 16662743 3'utr CG42389 FlyBase G3798.1 ATGTAAAACAGCAGACGCTTCTTTCATTCTCACA 19 16662731 0.656739165 4 19 105 1 1.491361694 0 0.421052632 0.64516129 19 0 0 31 2L:16662710-16662743 6 19.5 294 FBgn0259735 3930.076667 62.35333333 96.36 0.004961735 0.312733882 0.202366127 -7 -7 -7 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 2L 16662861 16662867 + 2L_16662861_16662867_+ 0.620204266 0.620204266 0.620204266 0 CG42389 FBtr0335497 16661777 16663218 2L + 16662828 16662873 3'utr CG42389 FlyBase G4880.1 GGGGGCTGCTATATTCGCTGGCAATCCAACTGTTGCATTTCACAAC 10 16662860 0.689674502 5 9 59 0.923076923 1.079181246 0.307692308 0.3 0.461538462 10 1 0 12 2L:16662828-16662873 7 CG42389 FBtr0335497 16661777 16663218 TGCATTT 7mer-m8 dme-miR-277-3p 2L + 16662817 16662877 3'utr CG42389 FlyBase G3799.1 GCAACCCCAGTGGGGGCTGCTATATTCGCTGGCAATCCAACTGTTGCATTTCACAACCAAC 10 16662841 0.873268497 4 8 55 0.846153846 1.041392685 0.307692308 0.3 0.461538462 10 2 0 11 2L:16662817-16662877 7 5.5 295 FBgn0259735 3930.076667 62.35333333 96.36 0.001399464 0.088206992 0.057077626 1 20 10.5 0.01 dme-miR-277-3p 7mer-A1 GCATTTA 2L 16663031 16663037 + 2L_16663031_16663037_+ 0.823349562 0.452885092 0.638117327 0.26195796 CG42389 FBtr0335497 16661777 16663218 2L + 16663009 16663078 3'utr CG42389 FlyBase G4882.1 AATGTAATTGTTTCTTTCCATAGCATTTAATGTGAATTATACAAAACGGATTCTTATCTAAAAAACCAAG 32 16663021 0.860041263 9 30 305 0.947368421 1.255272505 0.289473684 0.125 0.263157895 32 1 1 36 2L:16663009-16663078 7 CG42389 FBtr0335497 16661777 16663218 GCATTTA 7mer-A1 dme-miR-277-3p 2L + 16663014 16663075 3'utr CG42389 FlyBase G3801.1 AATTGTTTCTTTCCATAGCATTTAATGTGAATTATACAAAACGGATTCTTATCTAAAAAACC 15 16663020 0.874298366 8 15 127 1 1.342422681 0.045454545 0.4 0.590909091 15 0 0 22 2L:16663014-16663075 7 15 296 FBgn0259735 3930.076667 62.35333333 96.36 0.003816719 0.240564525 0.155666252 10 11 10.5 0.01 dme-miR-970-3p 6mer3-8 TCTTAT 2L 16663060 16663065 + 2L_16663060_16663065_+ 1 1 1 0 CG42389 FBtr0335497 16661777 16663218 2L + 16663009 16663078 3'utr CG42389 FlyBase G4882.1 AATGTAATTGTTTCTTTCCATAGCATTTAATGTGAATTATACAAAACGGATTCTTATCTAAAAAACCAAG 32 16663059 0.860041263 9 30 305 0.947368421 1.255272505 0.289473684 0.125 0.263157895 32 1 1 36 2L:16663009-16663078 6 CG42389 FBtr0335497 16661777 16663218 TCTTAT 6mer3-8 dme-miR-970-3p 2L + 16663014 16663075 3'utr CG42389 FlyBase G3801.1 AATTGTTTCTTTCCATAGCATTTAATGTGAATTATACAAAACGGATTCTTATCTAAAAAACC 15 16663063 0.874298366 8 15 127 1 1.342422681 0.045454545 0.4 0.590909091 15 0 0 22 2L:16663014-16663075 6 8 297 FBgn0259735 3930.076667 62.35333333 96.36 0.002035584 0.12830108 0.083022001 1 -3 -1 0.01 dme-miR-283-5p 6mer3-8 TGATAT 2L 16681598 16681603 + 2L_16681598_16681603_+ 1 1 1 0 squ FBtr0335140|FBtr0305565|FBtr0080887 16681443|16681443|16681443 16681653|16681653|16681653 2L + 16681583 16681620 3'utr squ FlyBase G4898.1 AGAAAGAAAAATACTTGATATCATAGGGTAAACAAAAT 107 16681597 0.697261625 5 105 636 0.975206612 1.594760753 0.024793388 0.112149533 0.214876033 107 1 2 118 2L:16681583-16681620 6 squ FBtr0080887|FBtr0335140|FBtr0305565 16681443|16681443|16681443 16681653|16681653|16681653 TGATAT 6mer3-8 dme-miR-283-5p 2L + 16681536 16681625 3'utr squ FlyBase G3815.1 AACGTCGTTTAGAAAACCGAATTTATATTGGATGCAGTTCTACAAATAGAAAGAAAAATACTTGATATCATAGGGTAAACAAAATATTTA 86 16681597 0.975047993 6 85 537 0.991071429 2.045322979 0.089285714 0.197674419 0.383928571 86 1 0 111 2L:16681536-16681625 6 93.5 298 FBgn0267347 773.79 92.38333333 140.8866667 0.120833818 1.012087317 0.663654001 1 1 1 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 2L 16699762 16699767 + 2L_16699762_16699767_+ 1 1 1 0 grp FBtr0080886|FBtr0100459|FBtr0080884|FBtr0339514|FBtr0080885 16699640|16699640|16699640|16699640|16699640 16699926|16699926|16699926|16699926|16699926 2L + 16699750 16699773 3'utr grp FlyBase G4915.1 CTAAAATTCTCAATGTGCTAACTT 5 16699757 0.769838117 2 4 37 0.8 0.602059991 0 0 0 5 1 0 4 2L:16699750-16699773 6 grp FBtr0080885|FBtr0080884|FBtr0339514|FBtr0080886|FBtr0100459 16699640|16699640|16699640|16699640|16699640 16699926|16699926|16699926|16699926|16699926 ATGTGC 6mer3-8 dme-miR-305-3p 2L + 16699751 16699786 3'utr grp FlyBase G3833.1 TAAAATTCTCAATGTGCTAACTTATTTTTAATTCAT 10 16699763 0.746083946 4 8 100 0.785714286 1.041392685 0 0.2 0.428571429 10 3 0 11 2L:16699751-16699786 6 7.5 299 FBgn0261278 1105.166667 59.92666667 91.90666667 0.006786307 0.125152965 0.081604526 5 -1 2 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 16705113 16705118 - 2L_16705113_16705118_- 1 1 1 0 CG31808 FBtr0303445 16704284 16705521 2L - 16705095 16705140 3'utr CG31808 FlyBase G11015.1 AACGGAATTTCTCGCGCCTTTCGTACCTTTTGTATTGTAATAAGTC 23 16705111 0.707252985 6 21 227 0.903225806 1.447158031 0.064516129 0.304347826 0.483870968 23 3 0 28 2L:16705095-16705140 6 CG31808 FBtr0303445 16704284 16705521 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L - 16705099 16705140 3'utr CG31808 FlyBase G8474.1 AACGGAATTTCTCGCGCCTTTCGTACCTTTTGTATTGTAATA 13 16705111 0.701802266 3 13 126 1 1.342422681 0.090909091 0.461538462 0.681818182 13 0 0 22 2L:16705099-16705140 6 17 300 FBgn0062978 13.66666667 0.833333333 1.236666667 1.243902439 20.4 13.74663073 -7 -7 -7 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC 2L 16723429 16723435 - 2L_16723429_16723435_- 0.661615645 0.661615645 0.661615645 0 VhaSFD FBtr0080942|FBtr0335143|FBtr0080941|FBtr0080940 16723230|16722881|16723230|16723230 16723992|16723818|16723818|16723818 2L - 16723356 16723576 3'utr VhaSFD FlyBase G11016.1 AAGTATTGAGAGAAAAATTCGATTTTTTGTTGGCATTCCAAAAAGCAATTCACTGTAATGGCAGAACAAATACAAGCAACTATCCTCTACAAATTGTTCCATTCAATTCGATTGTTTATATATTTTGTTGTTATTATTATTTGTGTTCTTAATTTTATGAGTGCGCCGCTGTACAGAGTTTTTCTAAACCAGATGATATGCGCTTCTTACGTTTATATAGT 35 16723436 0.991898932 15 34 375 0.953488372 1.612783857 0.209302326 0.171428571 0.325581395 35 2 0 41 2L:16723356-16723576 7 VhaSFD FBtr0080941|FBtr0080940|FBtr0080942|FBtr0335143 16723230|16723230|16723230|16722881 16723818|16723818|16723992|16723818 TGTGTTC 7mer-m8 dme-miR-317-3p 2L - 16723415 16723455 3'utr VhaSFD FlyBase G8476.1 ATTTTGTTGTTATTATTATTTGTGTTCTTAATTTTATGAGT 15 16723436 0.803846157 2 11 209 0.740740741 1.301029996 0.222222222 0.428571429 0.703703704 14 7 0 20 2L:16723415-16723455 7 15 301 FBgn0027779 484.9333333 25.11333333 38.29666667 0.030932087 0.597292275 0.391678997 1 1 1 0.01 dme-miR-988-3p 6mer3-8 ACAAGG 2L 16723847 16723852 - 2L_16723847_16723852_- 1 1 1 0 VhaSFD FBtr0080942 16723230 16723992 2L - 16723781 16723856 stop_codon VhaSFD FlyBase G11019.1 AGAAACAAGGTGCCGCCCCCATCGCTGGCAAGGCCTAGGTGGTCTAATCAACAAGTCATCCATGCACAGGCACACA 11 16723846 0.999198389 6 10 24 0.916666667 1.041392685 0.083333333 0.090909091 0.166666667 11 1 0 11 2L:16723781-16723856 6 VhaSFD FBtr0080942 16723230 16723992 ACAAGG 6mer3-8 dme-miR-988-3p 2L - 16723811 16723879 stop_codon VhaSFD FlyBase G8479.1 GCTGGAGAAGGAAAACGAGAACCAGAAACAAGGTGCCGCCCCCATCGCTGGCAAGGCCTAGGTGGTCTA 5 16723846 0.784122908 3 5 9 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 2L:16723811-16723879 6 3.5 302 FBgn0027779 484.9333333 25.11333333 38.29666667 0.007217487 0.139368198 0.091391766 -6 -6 -6 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 2L 16730963 16730968 + 2L_16730963_16730968_+ 1 1 1 0 CG31812 FBtr0290062 16730532 16731199 2L + 16730914 16730974 3'utr CG31812 FlyBase G4920.1 CCATGGGGATTGTGGGGATCCACGGCTGGCTGTTGTTCAAGGCTCATATTGTGTTAAAAAT 9 16730962 0.985866227 4 9 74 1 1 0 0.111111111 0.2 9 0 0 10 2L:16730914-16730974 6 CG31812 FBtr0290062 16730532 16731199 TGTGTT 6mer3-8 dme-miR-317-3p 2L + 16730900 16730975 3'utr CG31812 FlyBase G3837.1 AGGACTCACCCAGTCCATGGGGATTGTGGGGATCCACGGCTGGCTGTTGTTCAAGGCTCATATTGTGTTAAAAATA 8 16730962 0.985180342 3 8 61 1 1.204119983 0.25 0.5 0.75 8 0 0 16 2L:16730900-16730975 6 5.5 303 FBgn0051812 34.62 3.073333333 4.633333333 0.158867707 1.789587852 1.18705036 1 1 1 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2L 16746943 16746948 + 2L_16746943_16746948_+ 1 1 1 0 CG17912 FBtr0343767 16746627 16748781 2L + 16746918 16746956 3'utr CG17912 FlyBase G4935.1 ATGGTTAACCGAAACGCACACTCATAAGACTAATCTGAA 13 16746942 0.941258907 4 12 50 0.928571429 1.113943352 0.214285714 0.076923077 0.142857143 13 1 0 13 2L:16746918-16746956 6 CG17912 FBtr0343767 16746627 16748781 AAGACT 6mer3-8 dme-miR-14-3p 2L + 16746929 16746955 3'utr CG17912 FlyBase G3849.1 AAACGCACACTCATAAGACTAATCTGA 15 16746941 0.744566897 3 12 60 0.85 0.929418926 0.35 0.333333333 0.5 15 2 1 17 2L:16746929-16746955 6 14 304 FBgn0032600 1948.576667 105.4366667 161.06 0.007184731 0.132781132 0.086924128 1 2 1.5 0.01 dme-miR-318-3p 6mer3-8 CCCAGT 2L 16821224 16821229 - 2L_16821224_16821229_- 1 1 1 0 Cas FBtr0080930 16821154 16821323 2L - 16821183 16821249 3'utr Cas FlyBase G11060.1 ACTCGATCACTCATTGCATGCCCAGTTTATTGTCATTTAAAAATTGTATCTAATATATGTAAGTTTT 16 16821205 0.788820971 8 16 142 1 1.301029996 0 0.1875 0.35 16 0 0 20 2L:16821183-16821249 6 Cas FBtr0080930 16821154 16821323 CCCAGT 6mer3-8 dme-miR-318-3p 2L - 16821185 16821227 3'utr Cas FlyBase G8512.1 CAGTTTATTGTCATTTAAAAATTGTATCTAATATATGTAAGTT 5 16821222 0.992682591 3 3 46 0.857142857 0.77815125 0.142857143 0.2 0.428571429 5 1 0 6 2L:16821185-16821227 4 4.5 305 FBgn0022213 1584.566667 59.12 90.5 0.002839893 0.076116373 0.049723757 -24 -7 -15.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2L 16835168 16835174 - 2L_16835168_16835174_- 0.823349562 0.823349562 0.823349562 0 CG13283 FBtr0080928 16835134 16835259 2L - 16835142 16835202 3'utr CG13283 FlyBase G11085.1 AAAAAATAAAATGTATTGTTATATTTACCTAGTCATTGGAAATATACTTGTTATCAACATT 15 16835181 0.989186626 8 15 142 1 1.230448921 0.058823529 0.133333333 0.235294118 15 0 0 17 2L:16835142-16835202 7 CG13283 FBtr0080928 16835134 16835259 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 16835160 16835190 3'utr CG13283 FlyBase G8531.1 GTATTGTTATATTTACCTAGTCATTGGAAAT 9 16835179 0.623950934 5 9 86 1 1.041392685 0.545454545 0.111111111 0.272727273 9 0 0 11 2L:16835160-16835190 7 10.5 306 FBgn0032613 497 28.40666667 43.38333333 0.021126761 0.369631542 0.242028429 7 5 6 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2L 16886094 16886100 + 2L_16886094_16886100_+ 0.521223855 0.521223855 0.521223855 0 CG31743 FBtr0080947|FBtr0340171 16886024|16886024 16886319|16886319 2L + 16885959 16886149 stop_codon CG31743 FlyBase G4977.1 ATATGAGGATGACTTTCGACTCTTTGACTACGCACTGGACGAGGTACTCGGCTTTGAGTTTGGCTAATTGTGAATGAAAAGCTGCTCTCTCAATATCCCCAAGTCACCACCATAACGCTTTCCACTGGAAAAGATTGTGATTTTAGGCTAGGACTTGTAGATTTAGGTGCACTCCCATGCGAATATTATTT 581 16886093 0.933615634 31 559 4781 0.963358779 1.896939372 0.116030534 0.111876076 0.21221374 581 17 7 631 2L:16885959-16886149 7 CG31743 FBtr0340171|FBtr0080947 16886024|16886024 16886319|16886319 TGTGATT 7mer-m1 dme-miR-308-3p 2L + 16885957 16886139 stop_codon CG31743 FlyBase G3873.1 ATATATGAGGATGACTTTCGACTCTTTGACTACGCACTGGACGAGGTACTCGGCTTTGAGTTTGGCTAATTGTGAATGAAAAGCTGCTCTCTCAATATCCCCAAGTCACCACCATAACGCTTTCCACTGGAAAAGATTGTGATTTTAGGCTAGGACTTGTAGATTTAGGTGCACTCCCATGCG 388 16886093 0.986406284 31 366 3119 0.933913043 1.775731776 0.114782609 0.360824742 0.568695652 388 30 8 537 2L:16885957-16886139 7 411 307 FBgn0032618 47.81666667 2.756666667 4.25 8.595329383 149.0931076 96.70588235 1 1 1 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 2L 16886197 16886202 + 2L_16886197_16886202_+ 0.91214997 0.827141313 0.869645641 0.060110228 CG31743 FBtr0080947|FBtr0340171 16886024|16886024 16886319|16886319 2L + 16886177 16886224 3'utr CG31743 FlyBase G4978.1 ACAAATGTTTCCAAGGGTTTTTGACTGTAAAACTTAGTTATAATCATT 104 16886197 0.708366811 9 94 983 0.898305085 1.72427587 0.008474576 0.125 0.228813559 104 11 1 106 2L:16886177-16886224 6 CG31743 FBtr0340171|FBtr0080947 16886024|16886024 16886319|16886319 TTGACT 6mer3-8 dme-miR-1012-3p 2L + 16886146 16886224 3'utr CG31743 FlyBase G3874.1 ATTTTTGTTCTGTATACATACCTTCCCGCGCACAAATGTTTCCAAGGGTTTTTGACTGTAAAACTTAGTTATAATCATT 89 16886197 0.671865876 12 75 777 0.854700855 1.15490196 0.034188034 0.280898876 0.452991453 89 11 6 100 2L:16886146-16886224 6 84 308 FBgn0032618 47.81666667 2.756666667 4.25 1.756709655 30.47158404 19.76470588 0 0 0 0.01 dme-miR-33-5p 6mer2-7 AATGCA 2L 16887270 16887275 - 2L_16887270_16887275_- 1 1 1 0 CG6115 FBtr0345447|FBtr0080959 16887107|16887123 16887461|16887461 2L - 16887235 16887296 3'utr CG6115 FlyBase G11091.1 AAAAAAATATATACATACTGAAATGCATATTGTTCGGCCAAAAGAAACGTAACCCAAAACAC 11 16887265 0.942020656 7 11 53 1 1.079181246 0.166666667 0.090909091 0.166666667 11 0 0 12 2L:16887235-16887296 6 CG6115 FBtr0345447|FBtr0080959 16887107|16887123 16887461|16887461 AATGCA 6mer2-7 dme-miR-33-5p 2L - 16887253 16887291 3'utr CG6115 FlyBase G8534.1 AATATATACATACTGAAATGCATATTGTTCGGCCAAAAG 5 16887264 0.963599783 3 5 26 1 0.84509804 0.428571429 0.4 0.571428571 5 0 0 7 2L:16887253-16887291 6 6.5 309 FBgn0040985 1485.056667 264.5733333 406.8133333 0.004376937 0.024567858 0.015977844 -10 -11 -10.5 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG 2L 16887381 16887386 - 2L_16887381_16887386_- 1 1 1 0 CG6115 FBtr0345447|FBtr0080959 16887107|16887123 16887461|16887461 2L - 16887358 16887417 3'utr CG6115 FlyBase G11093.1 CGGAAATCGCTGCAAAAACTCAAGGACTGATGCTGTGGATCGGGGGGAGCACGAAGAAGG 320 16887387 0.953226922 7 316 1427 0.983651226 2.256477206 0.049046322 0.125 0.237057221 320 5 1 361 2L:16887358-16887417 6 CG6115 FBtr0345447|FBtr0080959 16887107|16887123 16887461|16887461 GCTGTG 6mer2-7 dme-miR-1008-3p 2L - 16887301 16887444 3'utr CG6115 FlyBase G8535.1 CGGCGGGCGGGAGGCGTGGCAGCGATGCGGAAATCGCTGCAAAAACTCAAGGACTGATGCTGTGGATCGGGGGGAGCACGAAGAAGGAGGTGTAGAAAGAATCATGAGAATATGATACGTTTCGCCTTGCTTGTCGCACACAAA 212 16887387 0.971968762 11 208 891 0.978527607 2.503790683 0.079754601 0.386792453 0.601226994 212 7 0 319 2L:16887301-16887444 6 260.5 310 FBgn0040985 1485.056667 264.5733333 406.8133333 0.175414182 0.984604143 0.640342827 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 2L 16916602 16916607 + 2L_16916602_16916607_+ 1 1 1 0 tweek FBtr0304930|FBtr0304927|FBtr0304929|FBtr0340173|FBtr0304928|FBtr0340172 16916563|16916563|16916563|16916563|16916563|16916563 16917052|16917052|16917052|16917052|16917052|16917052 2L + 16916550 16916630 stop_codon tweek FlyBase G5006.1 CCCCCAACGAATTAGCCATGGCAGAGTAGCATCTATGACAGTTGACAATTACCCAAAGTCCTTCGATTTAGTCTAAGTAGC 21 16916617 0.930556028 11 18 129 0.807692308 1.322219295 0.307692308 0.142857143 0.307692308 21 5 0 21 2L:16916550-16916630 6 tweek FBtr0340172|FBtr0304928|FBtr0340173|FBtr0304929|FBtr0304927|FBtr0304930 16916563|16916563|16916563|16916563|16916563|16916563 16917052|16917052|16917052|16917052|16917052|16917052 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 2L + 16916591 16916633 3'utr tweek FlyBase G3895.1 TTGACAATTACCCAAAGTCCTTCGATTTAGTCTAAGTAGCGAT 11 16916617 0.6697694 7 11 84 1 1.230448921 0.117647059 0.272727273 0.529411765 11 0 0 17 2L:16916591-16916633 6 9 311 FBgn0261671 3032.533333 22.31666667 34.24333333 0.002967816 0.403286034 0.262824881 -15 -15 -15 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 16916732 16916738 + 2L_16916732_16916738_+ 0.658999527 0.658999527 0.658999527 0 tweek FBtr0304930|FBtr0304927|FBtr0304929|FBtr0340173|FBtr0304928|FBtr0340172 16916563|16916563|16916563|16916563|16916563|16916563 16917052|16917052|16917052|16917052|16917052|16917052 2L + 16916659 16916803 3'utr tweek FlyBase G5007.1 TTTTTATTATTTATTACCCTGGTTGACCTAGCATGCTTTAAGATTGAAACTGGCGGTATTATGTGGCCAGTATGGCAGCTTCATATATAATGTAAATGGTTTGCTCTCGTTCCCCTTCTTTTTAAGCGTATCTGTATACTCTTTC 349 16916731 0.863210858 24 343 2201 0.986516854 2.341434525 0.042696629 0.220630372 0.388764045 349 5 1 439 2L:16916659-16916803 7 tweek FBtr0340172|FBtr0304928|FBtr0340173|FBtr0304929|FBtr0304927|FBtr0304930 16916563|16916563|16916563|16916563|16916563|16916563 16917052|16917052|16917052|16917052|16917052|16917052 GGCAGCT 7mer-m8 dme-miR-980-3p 2L + 16916656 16916756 3'utr tweek FlyBase G3896.1 AAGTTTTTATTATTTATTACCCTGGTTGACCTAGCATGCTTTAAGATTGAAACTGGCGGTATTATGTGGCCAGTATGGCAGCTTCATATATAATGTAAATG 220 16916731 0.974763009 16 208 1257 0.979228487 2.51851394 0.059347181 0.406392694 0.614243323 219 7 0 330 2L:16916656-16916756 7 254 312 FBgn0261671 3032.533333 22.31666667 34.24333333 0.083758354 11.38162808 7.41750219 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2L 1696897 1696903 + 2L_1696897_1696903_+ 0.823349562 0.823349562 0.823349562 0 chinmo FBtr0303933|FBtr0077878|FBtr0303934|FBtr0307047|FBtr0077877|FBtr0303935 1696856|1696148|1696856|1696148|1696148|1696148 1698617|1697837|1698617|1704682|1698617|1698617 2L + 1696831 1697056 stop_codon chinmo FlyBase G1044.2 ACGCCCAAGGTCAATGTGGAGCAATAGGATGAGGAGAAACGAGGAGATGCCCCCAGAGGATGCCCCCCAAAGAAGCTGCTTAGATTTAGGCTAAGAATCGATGAAACGACGGAGTGAAAGATAGACGAGTGATTTACGCGCGCGCAAAGAAGATGAAACATGACTACTGATGCAACTGCTGTTGCCCTCGGAGACCACCTACGACCAAGCTGGACAAGAAGCCCCA 130 1696891 0.99997418 23 124 515 0.95862069 1.841984805 0.296551724 0.069230769 0.165517241 130 5 1 139 2L:1696831-1697056 7 chinmo FBtr0077877|FBtr0303935|FBtr0303934|FBtr0307047|FBtr0303933|FBtr0077878 1696148|1696148|1696856|1696148|1696856|1696148 1698617|1698617|1698617|1704682|1698617|1697837 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2L + 1696854 1697016 stop_codon chinmo FlyBase G824.1 ATAGGATGAGGAGAAACGAGGAGATGCCCCCAGAGGATGCCCCCCAAAGAAGCTGCTTAGATTTAGGCTAAGAATCGATGAAACGACGGAGTGAAAGATAGACGAGTGATTTACGCGCGCGCAAAGAAGATGAAACATGACTACTGATGCAACTGCTGTTGCC 86 1696891 0.981443073 19 84 368 0.984 2.089905111 0.264 0.290697674 0.512 86 2 0 123 2L:1696854-1697016 7 40 313 FBgn0086758 5795.003333 67.42333333 103.87 0.006902498 0.593266426 0.385096756 6 6 6 0.01 dme-miR-184-5p 8mer-A1 TGATAAGA 2L 1697109 1697116 + 2L_1697109_1697116_+ 0.601217767 0.601217767 0.601217767 0 chinmo FBtr0303933|FBtr0077878|FBtr0303934|FBtr0307047|FBtr0077877|FBtr0303935 1696856|1696148|1696856|1696148|1696148|1696148 1698617|1697837|1698617|1704682|1698617|1698617 2L + 1697090 1697126 3'utr chinmo FlyBase G1045.1 AAGGAAACAAGGAACCTAATGATAAGATGTACCACAC 8 1697108 0.916825403 3 7 22 0.9 0.954242509 0.3 0.125 0.3 8 1 0 9 2L:1697090-1697126 8 chinmo FBtr0077877|FBtr0303935|FBtr0303934|FBtr0307047|FBtr0303933|FBtr0077878 1696148|1696148|1696856|1696148|1696856|1696148 1698617|1698617|1698617|1704682|1698617|1697837 TGATAAGA 8mer-A1 dme-miR-184-5p 2L + 1697090 1697140 3'utr chinmo FlyBase G825.2 AAGGAAACAAGGAACCTAATGATAAGATGTACCACACACGTGCACGTGTGC 5 1697117 0.934169996 2 4 16 0.666666667 0.77815125 0 0.4 0.666666667 5 3 0 6 2L:1697090-1697140 8 6 314 FBgn0086758 5795.003333 67.42333333 103.87 0.001035375 0.088989964 0.057764513 1 -8 -3.5 0.01 dme-miR-8-3p 6mer3-8 CAGTAT 2L 1697332 1697337 + 2L_1697332_1697337_+ 1 1 1 0 chinmo FBtr0303933|FBtr0077878|FBtr0303934|FBtr0307047|FBtr0077877|FBtr0303935 1696856|1696148|1696856|1696148|1696148|1696148 1698617|1697837|1698617|1704682|1698617|1698617 2L + 1697312 1697342 3'utr chinmo FlyBase G1046.1 CAAACCAAACCAATTAATGGCAGTATGAAAC 5 1697328 0.951202363 2 4 18 0.833333333 0.698970004 0 0.2 0.333333333 5 1 0 5 2L:1697312-1697342 6 chinmo FBtr0077877|FBtr0303935|FBtr0303934|FBtr0307047|FBtr0303933|FBtr0077878 1696148|1696148|1696856|1696148|1696856|1696148 1698617|1698617|1698617|1704682|1698617|1697837 CAGTAT 6mer3-8 dme-miR-8-3p 2L + 1697314 1697352 3'utr chinmo FlyBase G826.1 AACCAAACCAATTAATGGCAGTATGAAACAGGACACTCA 6 1697329 0.87736228 3 6 23 1 0.954242509 0 0.5 0.666666667 6 0 0 9 2L:1697314-1697352 6 5.5 315 FBgn0086758 5795.003333 67.42333333 103.87 0.000949094 0.081574134 0.052950804 4 3 3.5 0.01 dme-miR-92b-3p 6mer2-7 TGCAAT 2L 1698806 1698811 + 2L_1698806_1698811_+ 0.999977848 0.999999999 0.999988923 1.57E-05 chinmo FBtr0307047 1696148 1704682 2L + 1698791 1698857 3'utr chinmo FlyBase G1051.1 ATCTAAGATCCAAAATGCAATGGAAAATATTGAGAAAATCTGCCAAGGCTAGCAAGTTCTTGGCCTG 11 1698806 0.963622621 7 10 54 0.923076923 1.079181246 0.384615385 0.181818182 0.307692308 11 1 0 12 2L:1698791-1698857 6 chinmo FBtr0307047 1696148 1704682 TGCAAT 6mer2-7 dme-miR-92b-3p 2L + 1698790 1698858 3'utr chinmo FlyBase G830.1 AATCTAAGATCCAAAATGCAATGGAAAATATTGAGAAAATCTGCCAAGGCTAGCAAGTTCTTGGCCTGT 8 1698808 0.935412167 6 8 32 1 1.255272505 0.277777778 0.625 0.833333333 8 0 0 18 2L:1698790-1698858 6 5.5 316 FBgn0086758 5795.003333 67.42333333 103.87 0.000949094 0.081574134 0.052950804 0 -2 -1 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2L 1698964 1698969 + 2L_1698964_1698969_+ 0.999999999 0.999999999 0.999999999 0 chinmo FBtr0307047 1696148 1704682 2L + 1698894 1699064 3'utr chinmo FlyBase G1052.1 ATCGATAGCATGTGTGTATGCGTGGCCTCAGTTGTATAATGATAGAACCTAGATATAATATGTATTCGTATACCTGTAAACCTATACCTAAAAACTACTAAGCGCATATGTAGGAACACACTAGGCTCGCCAACGGAGAGGAGAGGAGAGAAGAGTTGAGATGGGTTTTAT 176 1698962 0.932441431 19 170 1206 0.965346535 2.290034611 0.069306931 0.142045455 0.252475248 176 7 0 195 2L:1698894-1699064 6 chinmo FBtr0307047 1696148 1704682 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2L + 1698868 1698985 3'utr chinmo FlyBase G831.1 TATTATTACTATTAACGCATATATATATCGATAGCATGTGTGTATGCGTGGCCTCAGTTGTATAATGATAGAACCTAGATATAATATGTATTCGTATACCTGTAAACCTATACCTAAA 50 1698962 0.973409926 13 49 390 0.986666667 1.568201724 0.013333333 0.32 0.546666667 50 0 1 74 2L:1698868-1698985 6 68.5 317 FBgn0086758 5795.003333 67.42333333 103.87 0.011820528 1.015968755 0.659478194 2 2 2 0.01 dme-miR-304-5p 6mer3-8 TGAGAT 2L 1699050 1699055 + 2L_1699050_1699055_+ 0.999999999 0.999999999 0.999999999 0 chinmo FBtr0307047 1696148 1704682 2L + 1698894 1699064 3'utr chinmo FlyBase G1052.1 ATCGATAGCATGTGTGTATGCGTGGCCTCAGTTGTATAATGATAGAACCTAGATATAATATGTATTCGTATACCTGTAAACCTATACCTAAAAACTACTAAGCGCATATGTAGGAACACACTAGGCTCGCCAACGGAGAGGAGAGGAGAGAAGAGTTGAGATGGGTTTTAT 176 1699050 0.932441431 19 170 1206 0.965346535 2.290034611 0.069306931 0.142045455 0.252475248 176 7 0 195 2L:1698894-1699064 6 chinmo FBtr0307047 1696148 1704682 TGAGAT 6mer3-8 dme-miR-304-5p 2L + 1698986 1699087 3'utr chinmo FlyBase G831.2 AACTACTAAGCGCATATGTAGGAACACACTAGGCTCGCCAACGGAGAGGAGAGGAGAGAAGAGTTGAGATGGGTTTTATTTGATCAGGGCCCAACTGAATTT 50 1699050 0.973409926 9 46 193 0.959459459 1.851258349 0.148648649 0.36 0.567567568 50 3 0 71 2L:1698986-1699087 6 48.5 318 FBgn0086758 5795.003333 67.42333333 103.87 0.008369279 0.719335542 0.466929816 0 0 0 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 1699298 1699305 + 2L_1699298_1699305_+ 0.650171354 0.650171354 0.650171354 0 chinmo FBtr0307047|FBtr0307047|FBtr0307047 1696148|1696148|1696148 1704682|1704682|1704682 2L + 1699255 1699336 3'utr chinmo FlyBase G1054.1 ATGCAGATGCAGACTACCAGTGTCACCCGATCCCCAGTTTGTTCTGTGATATCGTTTTCAAGTTGCAAGAACGAGTGGCGTT 87 1699296 0.989004859 13 76 838 0.834951456 1.457377197 0.223300971 0.149425287 0.281553398 87 15 2 86 2L:1699255-1699336 8 chinmo FBtr0307047|FBtr0307047|FBtr0307047 1696148|1696148|1696148 1704682|1704682|1704682 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 1699242 1699322 3'utr chinmo FlyBase G832.1 CTAACCATAGAAGATGCAGATGCAGACTACCAGTGTCACCCGATCCCCAGTTTGTTCTGTGATATCGTTTTCAAGTTGCAA 42 1699296 0.991286337 12 35 397 0.85 1.707570176 0.183333333 0.333333333 0.533333333 42 9 0 51 2L:1699242-1699322 8 58.5 319 FBgn0086758 5795.003333 67.42333333 103.87 0.010094904 0.867652148 0.563204005 2 2 2 0.01 dme-miR-79-3p 7mer-A1 AGCTTTA 2L 1700007 1700013 + 2L_1700007_1700013_+ 0.823349561 0.823349561 0.823349561 0 chinmo FBtr0307047 1696148 1704682 2L + 1699969 1700139 3'utr chinmo FlyBase G1057.2 ACCGAATGTTTCGCTGTAATCGAAGATGCTATCAAGAAAGCTTTAGTTCTTAGTTCGATTATCGGTTAGCTAGCTAGCTAGTGGCTAAGTGGCACCTAAGTTTAGTAGGAGGATTTAATTTTAAATGCAAAAGACACAATCACACACAATGAACACACAATAGCAATAATA 43 1700011 0.918129811 23 37 286 0.882352941 1.176091259 0.235294118 0.186046512 0.31372549 43 4 2 45 2L:1699969-1700139 7 chinmo FBtr0307047 1696148 1704682 AGCTTTA 7mer-A1 dme-miR-79-3p 2L + 1699974 1700066 3'utr chinmo FlyBase G836.1 ATGTTTCGCTGTAATCGAAGATGCTATCAAGAAAGCTTTAGTTCTTAGTTCGATTATCGGTTAGCTAGCTAGCTAGTGGCTAAGTGGCACCTA 29 1700011 0.851577693 9 23 183 0.818181818 1.079181246 0.272727273 0.379310345 0.590909091 29 6 2 36 2L:1699974-1700066 7 15 320 FBgn0086758 5795.003333 67.42333333 103.87 0.002588437 0.22247491 0.144411283 -4 -4 -4 0.01 dme-miR-14-3p 6mer2-7 AGACTG 2L 1700200 1700205 + 2L_1700200_1700205_+ 0.999999999 0.999999999 0.999999999 0 chinmo FBtr0307047 1696148 1704682 2L + 1700191 1700246 3'utr chinmo FlyBase G1058.1 TTTAGCCATAGACTGCGCAGTGACGAGATGAGCATGATACCACCACATAAACTTAT 25 1700199 0.904818819 4 25 116 1 1.431363764 0.444444444 0.08 0.148148148 25 0 0 27 2L:1700191-1700246 6 chinmo FBtr0307047 1696148 1704682 AGACTG 6mer2-7 dme-miR-14-3p 2L + 1700191 1700248 3'utr chinmo FlyBase G837.1 TTTAGCCATAGACTGCGCAGTGACGAGATGAGCATGATACCACCACATAAACTTATAC 18 1700199 0.897878472 5 14 67 0.857142857 1.079181246 0.285714286 0.388888889 0.607142857 18 3 1 24 2L:1700191-1700248 6 15.5 321 FBgn0086758 5795.003333 67.42333333 103.87 0.002674718 0.22989074 0.149224993 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2L 1700628 1700633 + 2L_1700628_1700633_+ 0.999999999 0.999999999 0.999999999 0 chinmo FBtr0307047 1696148 1704682 2L + 1700589 1700643 3'utr chinmo FlyBase G1062.1 TGTATACATCAATTTCGGCAAAGCAACTGAATGAGGCAAACCAAACAAAAAAAAA 826 1700620 0.976523064 5 816 1900 0.988974642 2.475671188 0.002205072 0.090799031 0.17199559 826 8 2 897 2L:1700589-1700643 6 chinmo FBtr0307047 1696148 1704682 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L + 1700593 1700643 3'utr chinmo FlyBase G839.2 TACATCAATTTCGGCAAAGCAACTGAATGAGGCAAACCAAACAAAAAAAAA 363 1700620 0.967612272 5 357 822 0.990990991 2.263241435 0.003603604 0.377410468 0.592792793 363 3 2 550 2L:1700593-1700643 6 584.5 322 FBgn0086758 5795.003333 67.42333333 103.87 0.100862755 8.669105651 5.627226341 8 8 8 0.01 dme-miR-252-5p 7mer-m8 GTACTTA 2L 1701697 1701703 + 2L_1701697_1701703_+ 0.588299916 0.588299916 0.588299916 0 chinmo FBtr0307047 1696148 1704682 2L + 1701675 1701712 3'utr chinmo FlyBase G1068.1 AAAGCCCCTCAACAAGCCAATTGTACTTACGATTACTT 32 1701696 0.771457759 2 32 191 1 1.602059991 0 0.21875 0.375 32 0 0 40 2L:1701675-1701712 7 chinmo FBtr0307047 1696148 1704682 GTACTTA 7mer-m8 dme-miR-252-5p 2L + 1701673 1701709 3'utr chinmo FlyBase G844.1 CGAAAGCCCCTCAACAAGCCAATTGTACTTACGATTA 19 1701696 0.783020989 2 18 111 1 1.477121255 0.033333333 0.526315789 0.7 19 0 0 30 2L:1701673-1701709 7 25.5 323 FBgn0086758 5795.003333 67.42333333 103.87 0.004400343 0.378207347 0.245499182 1 1 1 0.01 dme-miR-8-3p 6mer2-7 AGTATT 2L 1706674 1706679 + 2L_1706674_1706679_+ 0.99998907 0.99999291 0.99999099 2.69E-06 cpb FBtr0077881|FBtr0331630 1706226|1706226 1706777|1706962 2L + 1706580 1706696 3'utr cpb FlyBase G1081.1 AACTGTCCTCCCACATTGTTGCCGTTTGGAGTCGCGCTTCATCCAGAGTTCAGCCGAAAATGCCAACTTCGCCGCCCTCAAGACAGTATCCATAAGTATTTGTATCTTATTTGTAAT 35 1706680 0.98478382 12 33 237 0.956521739 1.342422681 0.108695652 0.285714286 0.456521739 35 1 1 44 2L:1706580-1706696 6 cpb FBtr0077881|FBtr0331630 1706226|1706226 1706777|1706962 AGTATT 6mer2-7 dme-miR-8-3p 2L + 1706582 1706684 3'utr cpb FlyBase G855.1 CTGTCCTCCCACATTGTTGCCGTTTGGAGTCGCGCTTCATCCAGAGTTCAGCCGAAAATGCCAACTTCGCCGCCCTCAAGACAGTATCCATAAGTATTTGTAT 23 1706680 0.982654664 9 20 144 0.857142857 1.079181246 0.035714286 0.217391304 0.357142857 23 3 1 24 2L:1706582-1706684 6 14.5 324 FBgn0011570 1677.946667 128.21 196.5033333 0.008641514 0.113095702 0.073790097 -6 -6 -6 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 2L 1706762 1706767 + 2L_1706762_1706767_+ 1 1 1 0 cpb FBtr0077881|FBtr0331630 1706226|1706226 1706777|1706962 2L + 1706705 1706795 3'utr cpb FlyBase G1081.2 TTTGCACCGAAGTCGAGGCACTTGCGTTTCGTTCTTAATCCTTCCGCGAATAAATATTGTGTTTATTAATTGTAACTTTGTGTTTGTGTGT 29 1706761 0.984897192 13 27 253 0.9375 1.176091259 0.15625 0.103448276 0.1875 29 1 1 30 2L:1706705-1706795 6 cpb FBtr0077881|FBtr0331630 1706226|1706226 1706777|1706962 TGTGTT 6mer3-8 dme-miR-317-3p 2L + 1706700 1706783 3'utr cpb FlyBase G856.1 GCATATTTGCACCGAAGTCGAGGCACTTGCGTTTCGTTCTTAATCCTTCCGCGAATAAATATTGTGTTTATTAATTGTAACTTT 28 1706761 0.734445526 14 25 250 0.902439024 1.267171728 0.073170732 0.428571429 0.609756098 28 3 1 37 2L:1706700-1706783 6 10.5 325 FBgn0011570 1677.946667 128.21 196.5033333 0.006257648 0.081896888 0.053434208 1 1 1 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2L 1706843 1706849 + 2L_1706843_1706849_+ 0.521223855 0.521223855 0.521223855 0 cpb FBtr0331630 1706226 1706962 2L + 1706817 1706869 3'utr cpb FlyBase G1082.1 AAGCAAAATATTAACTGAAATCGCTTTGTGATTGTATTATCTGAGGAAATGCA 20 1706848 0.931265133 7 20 168 1 1.414973348 0.038461538 0.2 0.384615385 20 0 0 26 2L:1706817-1706869 7 cpb FBtr0331630 1706226 1706962 TGTGATT 7mer-m1 dme-miR-308-3p 2L + 1706815 1706867 3'utr cpb FlyBase G857.1 CGAAGCAAAATATTAACTGAAATCGCTTTGTGATTGTATTATCTGAGGAAATG 22 1706848 0.970157702 7 22 179 1 1.544068044 0.057142857 0.454545455 0.657142857 22 0 0 35 2L:1706815-1706867 7 19.5 326 FBgn0011570 1677.946667 128.21 196.5033333 0.011621347 0.15209422 0.099234958 -5 -5 -5 0.01 dme-miR-190-5p 6mer3-8 ACATAT 2L 1707198 1707203 - 2L_1707198_1707203_- 0.999999952 1 0.999999976 0 CG17660 FBtr0077912 1707130 1707771 2L - 1707162 1707437 3'utr CG17660 FlyBase G6826.1 CGACTTGAATTCTTGTGCTGCTGCCCCTAACTACACTCGCAAAGGTGTATGAGTGAGCTGTTGGTGGTCGCCTCATTGTATGTATATAGCTGGTAACACAAGACGAAACGATCTATATAAATCTACGAGTATATTCTGTAATAACTATGATAAAACGCGACTATGCAAAGATTAAAAGTAATTGTCTAAGTAAGCACACAATCGTTTGCGTCACACACCTCAAGGTATTTAATTACATATTTTTAATCAAACGGTCTCCGATTTTCATAAATAAAT 213 1707176 0.824466227 44 193 1575 0.908745247 1.533299861 0.155893536 0.183098592 0.338403042 213 18 6 239 2L:1707162-1707437 6 CG17660 FBtr0077912 1707130 1707771 ACATAT 6mer3-8 dme-miR-190-5p 2L - 1707162 1707397 3'utr CG17660 FlyBase G5337.1 AAAGGTGTATGAGTGAGCTGTTGGTGGTCGCCTCATTGTATGTATATAGCTGGTAACACAAGACGAAACGATCTATATAAATCTACGAGTATATTCTGTAATAACTATGATAAAACGCGACTATGCAAAGATTAAAAGTAATTGTCTAAGTAAGCACACAATCGTTTGCGTCACACACCTCAAGGTATTTAATTACATATTTTTAATCAAACGGTCTCCGATTTTCATAAATAAAT 151 1707195 0.893197824 43 139 1060 0.918918919 1.531478917 0.166666667 0.337748344 0.54954955 151 13 5 204 2L:1707162-1707397 6 28 327 FBgn0031356 556.82 28.87 44.32666667 0.05028555 0.969864912 0.631673936 -27 -8 -17.5 0.01 dme-miR-184-5p 6mer3-8 TGATAA 2L 1707285 1707290 - 2L_1707285_1707290_- 1 1 1 0 CG17660 FBtr0077912 1707130 1707771 2L - 1707162 1707437 3'utr CG17660 FlyBase G6826.1 CGACTTGAATTCTTGTGCTGCTGCCCCTAACTACACTCGCAAAGGTGTATGAGTGAGCTGTTGGTGGTCGCCTCATTGTATGTATATAGCTGGTAACACAAGACGAAACGATCTATATAAATCTACGAGTATATTCTGTAATAACTATGATAAAACGCGACTATGCAAAGATTAAAAGTAATTGTCTAAGTAAGCACACAATCGTTTGCGTCACACACCTCAAGGTATTTAATTACATATTTTTAATCAAACGGTCTCCGATTTTCATAAATAAAT 213 1707303 0.824466227 44 193 1575 0.908745247 1.533299861 0.155893536 0.183098592 0.338403042 213 18 6 239 2L:1707162-1707437 6 CG17660 FBtr0077912 1707130 1707771 TGATAA 6mer3-8 dme-miR-184-5p 2L - 1707162 1707397 3'utr CG17660 FlyBase G5337.1 AAAGGTGTATGAGTGAGCTGTTGGTGGTCGCCTCATTGTATGTATATAGCTGGTAACACAAGACGAAACGATCTATATAAATCTACGAGTATATTCTGTAATAACTATGATAAAACGCGACTATGCAAAGATTAAAAGTAATTGTCTAAGTAAGCACACAATCGTTTGCGTCACACACCTCAAGGTATTTAATTACATATTTTTAATCAAACGGTCTCCGATTTTCATAAATAAAT 151 1707304 0.893197824 43 139 1060 0.918918919 1.531478917 0.166666667 0.337748344 0.54954955 151 13 5 204 2L:1707162-1707397 6 21.5 328 FBgn0031356 556.82 28.87 44.32666667 0.038612119 0.7447177 0.485035344 13 14 13.5 0.01 dme-miR-7-5p 7mer-A1 TCTTCCA 2L 1707615 1707621 - 2L_1707615_1707621_- 0.803592491 0.81447288 0.809032685 0.007693605 CG17660 FBtr0077912 1707130 1707771 2L - 1707542 1707679 3'utr CG17660 FlyBase G6828.2 TAGTTCTATCCGCCATTGAGGAGGAAAACCCCTTATTGCTGCGCTGCGCTGACACTGATCTTCCAATTTCGAGAACCGTCTGTCCGGCCACGCCTTCTGAGCCCGTGTAAAATAATGTATGTAATCGTAGTTCCTTCT 180 1707631 0.801228029 29 162 1080 0.887892377 1.092545208 0.197309417 0.194444444 0.349775785 180 10 15 198 2L:1707542-1707679 7 CG17660 FBtr0077912 1707130 1707771 TCTTCCA 7mer-A1 dme-miR-7-5p 2L - 1707549 1707679 3'utr CG17660 FlyBase G5340.1 TAGTTCTATCCGCCATTGAGGAGGAAAACCCCTTATTGCTGCGCTGCGCTGACACTGATCTTCCAATTTCGAGAACCGTCTGTCCGGCCACGCCTTCTGAGCCCGTGTAAAATAATGTATGTAATCGTAGT 171 1707630 0.780137689 25 148 1006 0.88973384 1.290034611 0.16730038 0.409356725 0.615969582 171 18 11 234 2L:1707549-1707679 7 57 329 FBgn0031356 556.82 28.87 44.32666667 0.102367013 1.974367856 1.285907655 10 9 9.5 0.01 dme-miR-184-3p 6mer2-7 CCGTCC 2L 1711399 1711404 - 2L_1711399_1711404_- 0.99999985 0.999999907 0.999999878 0 frtz FBtr0333545|FBtr0077911 1711300|1711300 1711751|1711751 2L - 1711337 1711412 3'utr frtz FlyBase G6837.1 AACTATTGCCGTCCCAGTTAGTGCAAAGCTTTAAATAGGAAAGTTTTACTCATAGGTTCTCTATACTCTTTACACA 57 1711406 0.982518515 9 46 376 0.830985915 1.770852012 0.028169014 0.210526316 0.366197183 57 12 0 59 2L:1711337-1711412 6 frtz FBtr0333545|FBtr0077911 1711300|1711300 1711751|1711751 CCGTCC 6mer2-7 dme-miR-184-3p 2L - 1711378 1711412 3'utr frtz FlyBase G5348.2 AACTATTGCCGTCCCAGTTAGTGCAAAGCTTTAAA 38 1711406 0.683313038 6 31 206 0.833333333 0.954242509 0 0.342105263 0.537037037 38 5 4 45 2L:1711378-1711412 6 38.5 330 FBgn0086698 6514.663333 221.8366667 342.0966667 0.005909745 0.173551111 0.112541289 2 2 2 0.01 dme-miR-7-5p 8mer-A1 GTCTTCCA 2L 1711693 1711700 - 2L_1711693_1711700_- 0.675381664 0.675381664 0.675381664 0 frtz FBtr0333545|FBtr0077911|FBtr0333544 1711300|1711300|1711598 1711751|1711751|1711751 2L - 1711678 1711714 3'utr frtz FlyBase G6838.1 CGGTTAAGCGCTGCGTCTTCCAATCGTTTGTAACTAT 19 1711697 0.630435661 6 16 133 0.80952381 0.929418926 0.380952381 0.105263158 0.19047619 19 3 1 17 2L:1711678-1711714 8 frtz FBtr0333545|FBtr0077911|FBtr0333544 1711300|1711300|1711598 1711751|1711751|1711751 GTCTTCCA 8mer-A1 dme-miR-7-5p 2L - 1711650 1711713 3'utr frtz FlyBase G5349.1 GGTTAAGCGCTGCGTCTTCCAATCGTTTGTAACTATTGTAGTAGGCTGCTCCTTCTACCCTCTT 18 1711697 0.971354525 5 18 111 1 1.322219295 0.238095238 0.111111111 0.238095238 18 0 0 21 2L:1711650-1711713 8 18 331 FBgn0086698 6514.663333 221.8366667 342.0966667 0.002762998 0.081140779 0.052616707 -3 -3 -3 0.01 dme-miR-92b-3p 8mer-m1 GTGCAATT 2L 1711735 1711742 - 2L_1711735_1711742_- 0.596698356 0.596698356 0.596698356 0 frtz FBtr0333545|FBtr0077911|FBtr0333544 1711300|1711300|1711598 1711751|1711751|1711751 2L - 1711717 1711763 stop_codon frtz FlyBase G6839.1 GGCGTGGTCTAATAATTCATAGTGCAATTCCCAGGCGTACACCACAC 25 1711744 0.684334359 4 21 148 0.892857143 1.397940009 0.285714286 0.12 0.214285714 25 3 0 25 2L:1711717-1711763 8 frtz FBtr0333545|FBtr0077911|FBtr0333544 1711300|1711300|1711598 1711751|1711751|1711751 GTGCAATT 8mer-m1 dme-miR-92b-3p 2L - 1711720 1711778 stop_codon frtz FlyBase G5350.1 AAGGTGGTCCACTTCGGCGTGGTCTAATAATTCATAGTGCAATTCCCAGGCGTACACCA 7 1711744 0.802747528 5 7 38 1 1.079181246 0 0.571428571 0.75 7 0 0 12 2L:1711720-1711778 8 14 332 FBgn0086698 6514.663333 221.8366667 342.0966667 0.002148998 0.063109495 0.040924105 2 2 2 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 1716306 1716311 - 2L_1716306_1716311_- 0.999999997 0.999999974 0.999999985 0 Rim2 FBtr0305618|FBtr0305618|FBtr0305618|FBtr0306167|FBtr0306167|FBtr0306167 1716242|1716242|1716242|1716242|1716242|1716242 1717102|1717102|1717102|1717102|1717102|1717102 2L - 1716247 1716354 3'utr Rim2 FlyBase G6844.1 AAAACGTATTTCACTGATAATGAGCAAAGAACTAAGGAAACCACTGTGAATAATTGATTGCAATCCGATTTGATGGTGAAATCAATAAATACAACAATTTTGTTTAAA 191 1716304 0.959861953 16 174 855 0.909465021 1.742332282 0.230452675 0.219895288 0.386831276 191 19 3 221 2L:1716247-1716354 6 Rim2 FBtr0305618|FBtr0305618|FBtr0305618|FBtr0306167|FBtr0306167|FBtr0306167 1716242|1716242|1716242|1716242|1716242|1716242 1717102|1717102|1717102|1717102|1717102|1717102 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 1716250 1716354 3'utr Rim2 FlyBase G5354.1 AAAACGTATTTCACTGATAATGAGCAAAGAACTAAGGAAACCACTGTGAATAATTGATTGCAATCCGATTTGATGGTGAAATCAATAAATACAACAATTTTGTTT 130 1716304 0.957515363 17 121 580 0.926829268 1.67669361 0.243902439 0.415384615 0.629268293 130 12 3 190 2L:1716250-1716354 6 138 333 FBgn0031359 376.9533333 20.33333333 30.89333333 0.366093062 6.786885246 4.466983168 -7 -7 -7 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 2L 1716730 1716735 - 2L_1716730_1716735_- 1 1 1 0 Rim2 FBtr0305618|FBtr0306167 1716242|1716242 1717102|1717102 2L - 1716444 1716877 3'utr Rim2 FlyBase G6845.2 AAGAAAAAACCAATAATGGGAAACACGCACCAGGATCGAAGTGCACCATCCACACCCTAAACCCACTTGCTGCATGCCACAGAAGGATGTGGTATGCCACCGCAGGGCGAAACGTTATCAAAATTTGAAAAGGCTGCTATTTAGTTAAAGTTACAATATATATTGAGTGTATAAATGTGGTTGATACTTGGATAATATAGTGTACATAGGACTCGATTCGCTCAGAGTGCATTGTAAATAGTTAAAGAGTGAGTTCGCTGGCGTAGTTTTCTTAGTTGTAAGCACAAAATGTTGAATCGGCCGCAGTTGCCAGTAGATGCCGCTAAATATATATATATATAGATATAAAGCCGACCGATCCGATTCGTAAACTGTAAAAGTTTCCGTTAAGTTTCCTCAAATGCGATATACGATTTAGTTATCATTACTCTACT 656 1716739 0.997252881 77 585 5290 0.888020833 1.833784375 0.203125 0.149390244 0.2734375 656 77 9 682 2L:1716444-1716877 6 Rim2 FBtr0305618|FBtr0306167 1716242|1716242 1717102|1717102 AGTTAA 6mer3-8 dme-miR-999-3p 2L - 1716503 1716860 3'utr Rim2 FlyBase G5355.2 GGGAAACACGCACCAGGATCGAAGTGCACCATCCACACCCTAAACCCACTTGCTGCATGCCACAGAAGGATGTGGTATGCCACCGCAGGGCGAAACGTTATCAAAATTTGAAAAGGCTGCTATTTAGTTAAAGTTACAATATATATTGAGTGTATAAATGTGGTTGATACTTGGATAATATAGTGTACATAGGACTCGATTCGCTCAGAGTGCATTGTAAATAGTTAAAGAGTGAGTTCGCTGGCGTAGTTTTCTTAGTTGTAAGCACAAAATGTTGAATCGGCCGCAGTTGCCAGTAGATGCCGCTAAATATATATATATATAGATATAAAGCCGACCGATCCGATTCGTAAACTGT 284 1716739 0.989492683 50 255 2137 0.904761905 1.734685557 0.169047619 0.348591549 0.55952381 284 34 6 380 2L:1716503-1716860 6 121.5 334 FBgn0031359 376.9533333 20.33333333 30.89333333 0.322321065 5.975409836 3.932887354 4 4 4 0.01 dme-miR-190-5p 6mer3-8 ACATAT 2L 17367730 17367735 - 2L_17367730_17367735_- 1 1 1 0 Lrch FBtr0080968|FBtr0080969 17367509|17367509 17368196|17368196 2L - 17367698 17367814 3'utr Lrch FlyBase G11109.1 CACCCATACGAGCGAAATATCGGGCCAAAATTACGACTAGCGATTAGTTGCATATTGAATACTGTTTTAAGTATGAATCACATATGAACATCCAAATATTTAGATATTTATCGAATT 15 17367731 0.970578688 11 14 85 0.9375 0.875061263 0.125 0.066666667 0.125 15 0 1 15 2L:17367698-17367814 6 Lrch FBtr0080968|FBtr0080969 17367509|17367509 17368196|17368196 ACATAT 6mer3-8 dme-miR-190-5p 2L - 17367707 17367746 3'utr Lrch FlyBase G8545.1 AAGTATGAATCACATATGAACATCCAAATATTTAGATATT 7 17367730 0.741111066 3 6 37 1 0.954242509 0.222222222 0.142857143 0.333333333 7 0 0 9 2L:17367707-17367746 6 6.5 335 FBgn0032633 3134.436667 93.34666667 144.12 0.002073738 0.06963291 0.045101304 -4 -5 -4.5 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 17368997 17369003 - 2L_17368997_17369003_- 0.658999527 0.658999527 0.658999527 0 Lrch FBtr0339797 17368740 17370818 2L - 17368970 17369027 3'utr Lrch FlyBase G11113.1 ATTGAAGGGAAGACAAAGCATTGAGGCAGCTGTAATCAGTCATACATTTTTTATGAAA 156 17369007 0.90037982 5 156 522 1 2.240549248 0.327586207 0.096153846 0.189655172 156 0 0 174 2L:17368970-17369027 7 Lrch FBtr0339797 17368740 17370818 GGCAGCT 7mer-m8 dme-miR-980-3p 2L - 17368983 17369026 3'utr Lrch FlyBase G8549.1 TTGAAGGGAAGACAAAGCATTGAGGCAGCTGTAATCAGTCATAC 102 17369007 0.782052038 4 102 318 1 2.184691431 0.37254902 0.37254902 0.581699346 102 0 0 153 2L:17368983-17369026 7 128.5 336 FBgn0032633 3134.436667 93.34666667 144.12 0.040996202 1.376589059 0.891618096 4 4 4 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 17369156 17369163 - 2L_17369156_17369163_- 0.500120318 0.500120318 0.500120318 0 Lrch FBtr0339797 17368740 17370818 2L - 17369149 17369183 3'utr Lrch FlyBase G11114.1 ATTAATTTAGGCATACTATTGTACTTAAACGATGA 14 17369164 0.732390734 2 14 116 1 1.146128036 0 0 0 14 0 0 14 2L:17369149-17369183 8 Lrch FBtr0339797 17368740 17370818 GTACTTAA 8mer-A1 dme-miR-252-5p 2L - 17369146 17369181 3'utr Lrch FlyBase G8550.1 TAATTTAGGCATACTATTGTACTTAAACGATGAAAA 11 17369164 0.674633709 4 10 92 0.944444444 1.230448921 0.333333333 0.454545455 0.666666667 11 1 0 17 2L:17369146-17369181 8 12.5 337 FBgn0032633 3134.436667 93.34666667 144.12 0.003987957 0.133909442 0.086733278 1 1 1 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2L 17370113 17370118 - 2L_17370113_17370118_- 1 1 1 0 Lrch FBtr0339797 17368740 17370818 2L - 17370110 17370168 3'utr Lrch FlyBase G11118.1 ATATAACTCGACTATAAGCAAAGCTACCTTTCAACGACTTCGATTGTGCATACCTGTAG 16 17370139 0.729741522 8 14 102 0.894736842 1.230448921 0.105263158 0.1875 0.315789474 16 2 0 17 2L:17370110-17370168 6 Lrch FBtr0339797 17368740 17370818 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2L - 17370111 17370164 3'utr Lrch FlyBase G8556.1 AACTCGACTATAAGCAAAGCTACCTTTCAACGACTTCGATTGTGCATACCTGTA 12 17370139 0.98186904 6 11 80 0.9375 1.176091259 0.0625 0.333333333 0.5 12 1 0 15 2L:17370111-17370164 6 6.5 338 FBgn0032633 3134.436667 93.34666667 144.12 0.002073738 0.06963291 0.045101304 21 21 21 0.01 dme-miR-1012-3p 7mer-A1 TGACTAA 2L 17370316 17370322 - 2L_17370316_17370322_- 0.823349562 0.813086788 0.818218175 0.007256895 Lrch FBtr0339797 17368740 17370818 2L - 17370262 17370339 3'utr Lrch FlyBase G11119.1 TATGACTATGATGACTATGACTAATAATGACTGTTTTAATTTAATAGATTTTATAATAATCTCCGGACTAAACATTAA 27 17370306 0.865440668 10 27 230 1 1.602059991 0.1 0.333333333 0.55 27 0 0 40 2L:17370262-17370339 7 Lrch FBtr0339797 17368740 17370818 TGACTAA 7mer-A1 dme-miR-1012-3p 2L - 17370290 17370338 3'utr Lrch FlyBase G8557.1 ATGACTATGATGACTATGACTAATAATGACTGTTTTAATTTAATAGATT 20 17370314 0.713741484 7 18 179 0.933333333 1.447158031 0.1 0.35 0.566666667 20 2 0 28 2L:17370290-17370338 7 21 339 FBgn0032633 3134.436667 93.34666667 144.12 0.006699768 0.224967862 0.145711907 -16 -8 -12 0.01 dme-miR-277-3p 7mer-A1 GCATTTA 2L 17370582 17370588 - 2L_17370582_17370588_- 0.823349562 0.823349562 0.823349562 0 Lrch FBtr0339797 17368740 17370818 2L - 17370561 17370621 3'utr Lrch FlyBase G11122.1 AAATTCCCCAAAAGACAAGCAGAACACATTGAGGCATTTAATGAGAGGAAACGCAAAGACT 108 17370592 0.760599074 6 99 433 0.949152542 2.049218023 0.025423729 0.074074074 0.152542373 108 6 0 112 2L:17370561-17370621 7 Lrch FBtr0339797 17368740 17370818 GCATTTA 7mer-A1 dme-miR-277-3p 2L - 17370523 17370619 3'utr Lrch FlyBase G8559.1 ATTCCCCAAAAGACAAGCAGAACACATTGAGGCATTTAATGAGAGGAAACGCAAAGACTTCAAATCAATATTTGGCTCCTATTTCTGTATGATTATT 90 17370592 0.951887446 7 86 387 0.969230769 1.62324929 0.084615385 0.377777778 0.569230769 90 2 2 126 2L:17370523-17370619 7 92.5 340 FBgn0032633 3134.436667 93.34666667 144.12 0.029510885 0.990929867 0.641826256 4 4 4 0.01 dme-miR-282-5p 6mer2-7 GAGGCT 2L 17370697 17370702 - 2L_17370697_17370702_- 1 1 1 0 Lrch FBtr0339797 17368740 17370818 2L - 17370662 17370755 3'utr Lrch FlyBase G11123.2 CAATAGAGTTAAGAGAGCTGCTTTTGCGCTTTTCCACTGGGTAGTGAGTTCTTGAGGCTGCTTTTGTTTACTGCTTAGGATTACGTCCCATATT 232 17370703 0.807255448 19 224 2219 0.971119134 1.65160103 0.472924188 0.159482759 0.296028881 232 3 5 269 2L:17370662-17370755 6 Lrch FBtr0339797 17368740 17370818 GAGGCT 6mer2-7 dme-miR-282-5p 2L - 17370664 17370753 3'utr Lrch FlyBase G8560.1 ATAGAGTTAAGAGAGCTGCTTTTGCGCTTTTCCACTGGGTAGTGAGTTCTTGAGGCTGCTTTTGTTTACTGCTTAGGATTACGTCCCATA 142 17370704 0.988497431 13 141 1330 0.995192308 2.315970345 0.408653846 0.373239437 0.572115385 142 1 0 207 2L:17370664-17370753 6 174.5 341 FBgn0032633 3134.436667 93.34666667 144.12 0.055671886 1.869375803 1.210796558 1 2 1.5 0.01 dme-miR-8-3p 7mer-A1 AGTATTA 2L 17413196 17413202 + 2L_17413196_17413202_+ 0.823349562 0.820747074 0.822048318 0.001840245 CG15141 FBtr0080979 17413170 17413499 2L + 17413130 17413230 stop_codon CG15141 FlyBase G5019.1 GAGAACAATGCCAACCTGGGTCAGCCCTATTTCTGTCGCTAAACAGTTAGCACTCTATATTACTCTAGTATTACCCACATTCCCCCATGAAAGCGAAACAT 13 17413209 0.982462454 6 10 73 0.875 1.146128036 0.1875 0.153846154 0.3125 13 2 0 14 2L:17413130-17413230 7 CG15141 FBtr0080979 17413170 17413499 AGTATTA 7mer-A1 dme-miR-8-3p 2L + 17413178 17413216 3'utr CG15141 FlyBase G3902.1 AGCACTCTATATTACTCTAGTATTACCCACATTCCCCCA 6 17413195 0.770006391 3 5 45 0.692307692 0.954242509 0.307692308 0.5 0.769230769 6 4 0 9 2L:17413178-17413216 7 6.5 342 FBgn0032635 404.2066667 29.24 44.61666667 0.016080883 0.222298222 0.145685469 -13 1 -6 0.01 dme-miR-932-5p 7mer-A1 GAATTGA 2L 17413287 17413293 - 2L_17413287_17413293_- 0.823349562 0.823349562 0.823349562 0 Dif FBtr0081009|FBtr0081008|FBtr0301578 17413246|17413246|17413246 17413514|17413514|17413514 2L - 17413266 17413379 3'utr Dif FlyBase G11138.1 TTACCGCAATGTACATAAATTTAATGAGGGAAATGCGAATCTCATTGCCCGATGCCTTGTTACGACTTTTCGTTATTGACAAAAGTGAATTGAAAATGATTATTGTTTAAATAA 26 17413290 0.979002354 14 25 172 0.966666667 1.462397998 0.4 0.153846154 0.266666667 26 1 0 29 2L:17413266-17413379 7 Dif FBtr0081008|FBtr0301578|FBtr0081009 17413246|17413246|17413246 17413514|17413514|17413514 GAATTGA 7mer-A1 dme-miR-932-5p 2L - 17413275 17413382 3'utr Dif FlyBase G8572.1 ATTTTACCGCAATGTACATAAATTTAATGAGGGAAATGCGAATCTCATTGCCCGATGCCTTGTTACGACTTTTCGTTATTGACAAAAGTGAATTGAAAATGATTATTG 23 17413319 0.976773326 13 21 142 0.96875 1.190331698 0.21875 0.304347826 0.5 23 0 1 31 2L:17413275-17413382 7 5.5 343 FBgn0011274 1172.133333 42.98333333 65.76666667 0.004692299 0.127956572 0.083628991 -3 26 11.5 0.01 dme-miR-304-5p 7mer-m8 TGAGATT 2L 17413336 17413342 + 2L_17413336_17413342_+ 0.62020343 0.620203428 0.620203429 0 CG15141 FBtr0080979 17413170 17413499 2L + 17413245 17413396 3'utr CG15141 FlyBase G5019.2 TGTAAATTCTAAAGTTATATTTTATTTAAACAATAATCATTTTCAATTCACTTTTGTCAATAACGAAAAGTCGTAACAAGGCATCGGGCAATGAGATTCGCATTTCCCTCATTAAATTTATGTACATTGCGGTAAAATAGAATTATATAAGA 33 17413328 0.982462453 15 28 199 0.880952381 1.091080469 0.095238095 0.212121212 0.380952381 33 3 2 37 2L:17413245-17413396 7 CG15141 FBtr0080979 17413170 17413499 TGAGATT 7mer-m8 dme-miR-304-5p 2L + 17413294 17413361 3'utr CG15141 FlyBase G3903.1 ACTTTTGTCAATAACGAAAAGTCGTAACAAGGCATCGGGCAATGAGATTCGCATTTCCCTCATTAAAT 15 17413328 0.940488661 7 15 61 1 1.301029996 0.2 0.333333333 0.5 15 0 0 20 2L:17413294-17413361 7 10 344 FBgn0032635 404.2066667 29.24 44.61666667 0.02473982 0.341997264 0.22413149 8 8 8 0.01 dme-miR-1012-3p 7mer-m8 TTGACTA 2L 17415132 17415138 - 2L_17415132_17415138_- 0.631525976 0.631525999 0.631525988 0 Dif FBtr0301577 17414905 17415684 2L - 17415065 17415170 5'utr Dif FlyBase G11142.2 CACAAACTCATCACTCGATGGTGTTATTTATATTGACTAGCAAAAATGTTTGCTGAAAATTCACTATTGATAGTACAGGATTGAATACCTTGTGGACCAATGGATA 7 17415153 0.96188691 5 6 43 1 0.903089987 0 0.142857143 0.25 7 0 0 8 2L:17415065-17415170 7 Dif FBtr0301577 17414905 17415684 TTGACTA 7mer-m8 dme-miR-1012-3p 2L - 17415052 17415158 5'utr Dif FlyBase G8578.1 ACTCGATGGTGTTATTTATATTGACTAGCAAAAATGTTTGCTGAAAATTCACTATTGATAGTACAGGATTGAATACCTTGTGGACCAATGGATAAAGTTGTTGTCCG 9 17415139 0.980496726 8 9 72 1 1 0 0.111111111 0.2 9 0 0 10 2L:17415052-17415158 7 2.5 345 FBgn0011274 1172.133333 42.98333333 65.76666667 0.002132863 0.058162078 0.038013178 15 1 8 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2L 17415522 17415528 - 2L_17415522_17415528_- 0.661615511 0.661615511 0.661615511 0 Dif FBtr0301577 17414905 17415684 2L - 17415441 17415566 5'utr Dif FlyBase G11145.1 ACAGCAAAACACACAACTGCACCAACAAATTAAACTTTTCTAGTCGTCTTTTTGTTTCAGTATTAATTATAATGATTACACAAATTTCTAGCTAAGAACCCCTGAGATCGATCGCTCACCAAATTC 218 17415529 0.992561497 18 210 2415 0.955172414 2.141449773 0.044827586 0.252293578 0.437931034 218 12 1 277 2L:17415441-17415566 7 Dif FBtr0301577 17414905 17415684 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2L - 17415486 17415544 5'utr Dif FlyBase G8580.1 CAACAAATTAAACTTTTCTAGTCGTCTTTTTGTTTCAGTATTAATTATAATGATTACAC 167 17415529 0.730211041 15 160 1896 0.954166667 2.359835482 0.016666667 0.317365269 0.525 167 11 0 229 2L:17415486-17415544 7 178.5 346 FBgn0011274 1172.133333 42.98333333 65.76666667 0.152286429 4.152772392 2.714140902 1 1 1 0.01 dme-miR-2b-2-5p 7mer-m8 TTGAAGA 2L 17415653 17415659 - 2L_17415653_17415659_- 0.631525999 0.631525999 0.631525999 0 Dif FBtr0301577 17414905 17415684 2L - 17415635 17415681 5'utr Dif FlyBase G11146.1 AATTGGGTTACGGATAACTGATTTGAAGACAAAATGGGATAACGAGA 5 17415658 0.985592211 3 4 30 0.8 0.602059991 0 0 0 5 1 0 4 2L:17415635-17415681 7 Dif FBtr0301577 17414905 17415684 TTGAAGA 7mer-m8 dme-miR-2b-2-5p 2L - 17415647 17415683 5'utr Dif FlyBase G8581.1 TGAATTGGGTTACGGATAACTGATTTGAAGACAAAAT 8 17415678 0.930858254 4 8 56 1 1.113943352 0.230769231 0.375 0.615384615 8 0 0 13 2L:17415647-17415683 7 4.5 347 FBgn0011274 1172.133333 42.98333333 65.76666667 0.003839154 0.104691741 0.06842372 -1 19 9 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 2L 17436913 17436918 - 2L_17436913_17436918_- 1 0.999562028 0.999781014 0.000309713 dl FBtr0081005|FBtr0301384|FBtr0301383|FBtr0081006 17436828|17436828|17436828|17436828 17437047|17437047|17437047|17437047 2L - 17436875 17436971 3'utr dl FlyBase G11160.1 TTAAATCTAACCGACCTGGTCGTCGTCTAAATGATTGTTTAGTGCTGTAATAACTAGTCTTAAGGCGAAATGTAATGTGTTTTTGTAGGAAGTAAGG 29 17436912 0.841383862 14 26 255 0.90625 1.161368002 0.34375 0.103448276 0.1875 29 2 1 29 2L:17436875-17436971 6 dl FBtr0301384|FBtr0081005|FBtr0301383|FBtr0081006 17436828|17436828|17436828|17436828 17437047|17437047|17437047|17437047 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 2L - 17436873 17436964 3'utr dl FlyBase G8589.1 TAACCGACCTGGTCGTCGTCTAAATGATTGTTTAGTGCTGTAATAACTAGTCTTAAGGCGAAATGTAATGTGTTTTTGTAGGAAGTAAGGTT 26 17436930 0.992579452 12 21 246 0.871794872 1.531478917 0.230769231 0.346153846 0.564102564 26 5 0 34 2L:17436873-17436964 6 15 348 FBgn0260632 1797.99 61.25333333 93.53666667 0.008342649 0.244884632 0.160364919 -6 12 3 0.01 dme-miR-304-5p 6mer2-7 GAGATT 2L 17438779 17438784 - 2L_17438779_17438784_- 0.953752178 0.999999851 0.976876014 0.032702062 dl FBtr0081007|FBtr0340250 17438644|17438644 17439788|17439788 2L - 17438734 17438816 3'utr dl FlyBase G11164.1 ATGATTAGTCGAAATTATAGTCAAGAAAATGAGAGATTGATTCGAAATCAATATGAAATTTTTGTCGCTTTTCTACTCGTTTA 18 17438780 0.969136251 9 18 106 1 1.322219295 0.142857143 0.111111111 0.238095238 18 0 0 21 2L:17438734-17438816 6 dl FBtr0340250|FBtr0081007 17438644|17438644 17439788|17439788 GAGATT 6mer2-7 dme-miR-304-5p 2L - 17438768 17438815 3'utr dl FlyBase G8592.1 TGATTAGTCGAAATTATAGTCAAGAAAATGAGAGATTGATTCGAAATC 16 17438780 0.78324676 6 16 77 1 1.447158031 0.178571429 0.4375 0.678571429 16 0 0 28 2L:17438768-17438815 6 10 349 FBgn0260632 1797.99 61.25333333 93.53666667 0.005561766 0.163256421 0.106909946 -4 -4 -4 0.01 dme-miR-33-5p 8mer-m1 CAATGCAC 2L 17438894 17438901 - 2L_17438894_17438901_- 0.662435351 0.662435351 0.662435351 0 dl FBtr0081007|FBtr0340250 17438644|17438644 17439788|17439788 2L - 17438877 17439067 3'utr dl FlyBase G11165.1 TGTTTTGAGATGGATGCTAGACATCTAACTGAATCCTACCTAGTCAAATAGCATCATATATATTTGATGTTTTCTTCGGTATACCAAAGACTACTTAACAAATCATCGCCCCCGATGACGTATTACTCGAATAGACTCTTTTAGAAACTATTAGAAAGCACTCAATCAATGCACAAATCCACTCACCCAGA 281 17438902 0.916373081 31 263 1689 0.949704142 1.904445041 0.159763314 0.170818505 0.310650888 281 14 3 321 2L:17438877-17439067 8 dl FBtr0340250|FBtr0081007 17438644|17438644 17439788|17439788 CAATGCAC 8mer-m1 dme-miR-33-5p 2L - 17438865 17439006 3'utr dl FlyBase G8593.1 ATTTGATGTTTTCTTCGGTATACCAAAGACTACTTAACAAATCATCGCCCCCGATGACGTATTACTCGAATAGACTCTTTTAGAAACTATTAGAAAGCACTCAATCAATGCACAAATCCACTCACCCAGAACACCATGAAAT 157 17438928 0.976044885 19 147 938 0.951020408 2.367355921 0.093877551 0.324840764 0.567346939 157 12 0 233 2L:17438865-17439006 8 51 350 FBgn0260632 1797.99 61.25333333 93.53666667 0.028365008 0.832607749 0.545240726 1 27 14 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 17439328 17439333 - 2L_17439328_17439333_- 1 1 1 0 dl FBtr0081007|FBtr0340250 17438644|17438644 17439788|17439788 2L - 17439248 17439360 3'utr dl FlyBase G11167.1 AAATTGAAACCGAAAACCCGATCATATGTACCTACAACACGGTGTGTATATTTTGTCTTATAGATCCAGCGCACTTGAGGCGGAAACGTCAGAAGACTGGCGGTGATCCCATG 84 17439334 0.953880843 10 80 370 0.95959596 1.977723605 0.303030303 0.154761905 0.282828283 84 4 0 95 2L:17439248-17439360 6 dl FBtr0340250|FBtr0081007 17438644|17438644 17439788|17439788 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L - 17439313 17439358 3'utr dl FlyBase G8595.1 ATTGAAACCGAAAACCCGATCATATGTACCTACAACACGGTGTGTA 50 17439334 0.958975607 3 47 230 0.962025316 1.880813592 0.240506329 0.44 0.64556962 50 3 0 76 2L:17439313-17439358 6 60 351 FBgn0260632 1797.99 61.25333333 93.53666667 0.033370597 0.979538529 0.641459677 1 1 1 0.01 dme-miR-970-3p 6mer3-8 TCTTAT 2L 17460903 17460908 - 2L_17460903_17460908_- 0.966958464 1 0.983479232 0.023363869 BicD FBtr0081002|FBtr0330225|FBtr0330226 17460815|17459603|17460815 17461725|17461725|17461665 2L - 17460816 17460921 3'utr BicD FlyBase G11186.1 CTAAGTTTTTGCGTCTTATTTAGCATTAATTGCAAACATAACTTATGATTTGTGCATTATTATTTAATACAATTAATAAATTGCAACGCAACAAAATTGAGCAAGA 13 17460914 0.994048428 9 10 127 0.846153846 0.740362689 0.384615385 0 0 13 1 1 11 2L:17460816-17460921 6 BicD FBtr0081002|FBtr0330225|FBtr0330226 17460815|17459603|17460815 17461725|17461725|17461665 TCTTAT 6mer3-8 dme-miR-970-3p 2L - 17460829 17460919 3'utr BicD FlyBase G8606.1 AAGTTTTTGCGTCTTATTTAGCATTAATTGCAAACATAACTTATGATTTGTGCATTATTATTTAATACAATTAATAAATTGCAACGCAACA 10 17460903 0.993639402 9 9 102 0.857142857 1.079181246 0.357142857 0.4 0.571428571 10 2 0 12 2L:17460829-17460919 6 6 352 FBgn0000183 544.58 15.32 23.58666667 0.011017665 0.391644909 0.254381006 6 -5 0.5 0.01 dme-miR-283-5p 7mer-m8 TGATATT 2L 17461215 17461221 - 2L_17461215_17461221_- 0.620203677 0.620203677 0.620203677 0 BicD FBtr0081002|FBtr0330225|FBtr0330226 17460815|17459603|17460815 17461725|17461725|17461665 2L - 17461198 17461240 3'utr BicD FlyBase G11189.1 GATGTTGAACAGATGGTATTGATATTGGCAACTGAAACATGCA 9 17461215 0.836989282 4 9 57 1 1.041392685 0.272727273 0.222222222 0.363636364 9 0 0 11 2L:17461198-17461240 7 BicD FBtr0081002|FBtr0330225|FBtr0330226 17460815|17459603|17460815 17461725|17461725|17461665 TGATATT 7mer-m8 dme-miR-283-5p 2L - 17461203 17461248 3'utr BicD FlyBase G8608.1 CACAAATTGATGTTGAACAGATGGTATTGATATTGGCAACTGAAAC 7 17461226 0.782233352 5 7 49 1 1.176091259 0 0.714285714 0.866666667 7 0 0 15 2L:17461203-17461248 7 6.5 353 FBgn0000183 544.58 15.32 23.58666667 0.011935804 0.424281984 0.275579423 -6 5 -0.5 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 2L 17461499 17461504 - 2L_17461499_17461504_- 1 1 1 0 BicD FBtr0081002|FBtr0330225|FBtr0305688|FBtr0330226 17460815|17459603|17461396|17460815 17461725|17461725|17462145|17461665 2L - 17461430 17461674 stop_codon BicD FlyBase G11191.1 AAGTTGTAAAGTCGTTGGAGTTCCTGCGGAAATGAGAGATTCCCAAAACCACATGATATACTGCGAACGTATTTGAGAACGAAGCTATATCCCAGCTGTATCCAACTACTATAACTATGTTTGTTTGTATTGTACTTGTATTTATTGAAAGTTTAGTTAGATGAAAGTTTTGTGTTAGGCAAGGGAGCAACAAACGGTTATTAACGGTTAGTTACTTAAACGTCCATTTAATTTAATTAAAAACA 159 17461505 0.943649442 31 154 1175 0.972677596 1.949390007 0.169398907 0.144654088 0.256830601 159 4 1 178 2L:17461430-17461674 6 BicD FBtr0081002|FBtr0330225|FBtr0305688|FBtr0330226 17460815|17459603|17461396|17460815 17461725|17461725|17462145|17461665 TGTGTT 6mer3-8 dme-miR-317-3p 2L - 17461431 17461525 3'utr BicD FlyBase G8609.1 AGTTTAGTTAGATGAAAGTTTTGTGTTAGGCAAGGGAGCAACAAACGGTTATTAACGGTTAGTTACTTAAACGTCCATTTAATTTAATTAAAAAC 72 17461505 0.756518576 14 68 614 0.944954128 2.012837225 0.247706422 0.416666667 0.614678899 72 6 0 103 2L:17461431-17461525 6 44.5 354 FBgn0000183 544.58 15.32 23.58666667 0.081714349 2.904699739 1.886659129 1 1 1 0.01 dme-miR-283-5p 6mer3-8 TGATAT 2L 17461616 17461621 - 2L_17461616_17461621_- 1 1 1 0 BicD FBtr0081002|FBtr0330225|FBtr0305688|FBtr0330226 17460815|17459603|17461396|17460815 17461725|17461725|17462145|17461665 2L - 17461430 17461674 stop_codon BicD FlyBase G11191.1 AAGTTGTAAAGTCGTTGGAGTTCCTGCGGAAATGAGAGATTCCCAAAACCACATGATATACTGCGAACGTATTTGAGAACGAAGCTATATCCCAGCTGTATCCAACTACTATAACTATGTTTGTTTGTATTGTACTTGTATTTATTGAAAGTTTAGTTAGATGAAAGTTTTGTGTTAGGCAAGGGAGCAACAAACGGTTATTAACGGTTAGTTACTTAAACGTCCATTTAATTTAATTAAAAACA 159 17461621 0.943649442 31 154 1175 0.972677596 1.949390007 0.169398907 0.144654088 0.256830601 159 4 1 178 2L:17461430-17461674 6 BicD FBtr0081002|FBtr0330225|FBtr0305688|FBtr0330226 17460815|17459603|17461396|17460815 17461725|17461725|17462145|17461665 TGATAT 6mer3-8 dme-miR-283-5p 2L - 17461593 17461651 3'utr BicD FlyBase G8610.1 CTGCGGAAATGAGAGATTCCCAAAACCACATGATATACTGCGAACGTATTTGAGAACGA 25 17461621 0.888477998 7 25 101 1 1.602059991 0.175 0.44 0.65 25 0 0 40 2L:17461593-17461651 6 35 355 FBgn0000183 544.58 15.32 23.58666667 0.064269712 2.2845953 1.483889203 0 0 0 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 2L 17475521 17475526 - 2L_17475521_17475526_- 1 1 1 0 Aac11 FBtr0081001 17474910 17475587 2L - 17475510 17475548 3'utr Aac11 FlyBase G11207.1 ACTTCACTTGAATGGTTTGTCCCTAGTCCGTAGACATAC 7 17475518 0.975400187 5 7 52 1 0.954242509 0.444444444 0.142857143 0.333333333 7 0 0 9 2L:17475510-17475548 6 Aac11 FBtr0081001 17474910 17475587 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 2L - 17475511 17475540 3'utr Aac11 FlyBase G8624.1 TGAATGGTTTGTCCCTAGTCCGTAGACATA 11 17475532 0.55876014 6 10 80 0.956521739 1.342422681 0.173913043 0.636363636 0.826086957 11 1 0 22 2L:17475511-17475540 6 9 356 FBgn0027885 2398.67 116.9633333 177.4933333 0.003752079 0.076947191 0.05070613 -8 6 -1 0.01 dme-bantam-3p 8mer-A1 TGATCTCA 2L 17481931 17481938 + 2L_17481931_17481938_+ 0.631136385 0.631136385 0.631136385 0 CG5110 FBtr0306162 17481785 17482037 2L + 17481886 17481965 3'utr CG5110 FlyBase G5034.1 CACCATTGTACTATTCCGGGAATTTATTTCATATCCTGCGAAGGGTGATCTCAAAGATGAACAAAGTTCCGAGTCCTCCG 38 17481931 0.978760997 7 34 229 0.931818182 1.311753861 0.454545455 0.157894737 0.272727273 38 2 1 41 2L:17481886-17481965 8 CG5110 FBtr0306162 17481785 17482037 TGATCTCA 8mer-A1 dme-bantam-3p 2L + 17481890 17481944 3'utr CG5110 FlyBase G3918.1 ATTGTACTATTCCGGGAATTTATTTCATATCCTGCGAAGGGTGATCTCAAAGATG 19 17481931 0.971694183 6 18 109 0.962962963 1.414973348 0.518518519 0.368421053 0.555555556 19 1 0 26 2L:17481890-17481944 8 25.5 357 FBgn0032642 238.3333333 55.84666667 85.14666667 0.106993007 0.456607377 0.299483245 0 0 0 0.01 dme-miR-304-5p 6mer2-7 GAGATT 2L 17482375 17482380 - 2L_17482375_17482380_- 1 1 1 0 CG6453 FBtr0080998|FBtr0305684 17481986|17482196 17482446|17482446 2L - 17482251 17482433 3'utr CG6453 FlyBase G11232.2 CGACGATGAGGATGAGCCGCAGAGAAATGTGAATGCTTGGCATGCGTAGACCAGAGATTTGGGGATTGTATTTTAGTTTTAAAGGAGAATATCAATTTTGTCGAGATCATTCCCAAACTGCAGCAGGAAAACCATCAAGAATTGTAGCTAATTAACTCAGTATATGCATTTAAGCAAAAAGTA 120 17482398 0.92162616 27 116 811 0.964788732 1.835690571 0.295774648 0.175 0.302816901 120 4 1 137 2L:17482251-17482433 6 CG6453 FBtr0080998|FBtr0305684 17481986|17482196 17482446|17482446 GAGATT 6mer2-7 dme-miR-304-5p 2L - 17482254 17482436 3'utr CG6453 FlyBase G8643.1 AATCGACGATGAGGATGAGCCGCAGAGAAATGTGAATGCTTGGCATGCGTAGACCAGAGATTTGGGGATTGTATTTTAGTTTTAAAGGAGAATATCAATTTTGTCGAGATCATTCCCAAACTGCAGCAGGAAAACCATCAAGAATTGTAGCTAATTAACTCAGTATATGCATTTAAGCAAAAA 91 17482398 0.981030098 22 88 628 0.976 2.086359831 0.296 0.307692308 0.496 91 3 0 122 2L:17482254-17482436 6 22.5 358 FBgn0032643 2643.526667 148.89 226.0466667 0.008511357 0.151118275 0.099536969 18 18 18 0.01 dme-miR-307a-3p 7mer-A1 GTTGTGA 2L 17973474 17973480 + 2L_17973474_17973480_+ 0.823349306 0.741633631 0.782491468 0.057781726 CG5674 FBtr0290267|FBtr0081021|FBtr0340182|FBtr0081022 17973392|17973392|17973392|17972122 17974868|17974868|17974868|17974868 2L + 17973453 17973502 3'utr CG5674 FlyBase G5043.1 TTGAGGGCACACACACCTGGAGTTGTGATCGAATTAGCTATGTGATTTAC 9 17973470 0.980914636 3 9 64 1 0.954242509 0 0 0 9 0 0 9 2L:17973453-17973502 7 CG5674 FBtr0340182|FBtr0081022|FBtr0290267|FBtr0081021 17973392|17972122|17973392|17973392 17974868|17974868|17974868|17974868 GTTGTGA 7mer-A1 dme-miR-307a-3p 2L + 17973454 17973502 3'utr CG5674 FlyBase G3922.1 TGAGGGCACACACACCTGGAGTTGTGATCGAATTAGCTATGTGATTTAC 6 17973499 0.985798527 4 5 42 0.8125 1.113943352 0 0.666666667 0.875 6 3 0 13 2L:17973454-17973502 7 3.5 359 FBgn0032656 133.77 5.08 7.833333333 0.026164312 0.688976378 0.446808511 4 -25 -10.5 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2L 17973493 17973499 + 2L_17973493_17973499_+ 0.441363537 0.443131016 0.442247276 0.001249811 CG5674 FBtr0290267|FBtr0081021|FBtr0340182|FBtr0081022 17973392|17973392|17973392|17972122 17974868|17974868|17974868|17974868 2L + 17973453 17973502 3'utr CG5674 FlyBase G5043.1 TTGAGGGCACACACACCTGGAGTTGTGATCGAATTAGCTATGTGATTTAC 9 17973470 0.980914636 3 9 64 1 0.954242509 0 0 0 9 0 0 9 2L:17973453-17973502 7 CG5674 FBtr0340182|FBtr0081022|FBtr0290267|FBtr0081021 17973392|17972122|17973392|17973392 17974868|17974868|17974868|17974868 TGTGATT 7mer-m1 dme-miR-308-3p 2L + 17973454 17973502 3'utr CG5674 FlyBase G3922.1 TGAGGGCACACACACCTGGAGTTGTGATCGAATTAGCTATGTGATTTAC 6 17973499 0.985798527 4 5 42 0.8125 1.113943352 0 0.666666667 0.875 6 3 0 13 2L:17973454-17973502 7 2.5 360 FBgn0032656 133.77 5.08 7.833333333 0.018688794 0.492125984 0.319148936 23 -6 8.5 0.01 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 2L 17973602 17973608 + 2L_17973602_17973608_+ 0.620204031 0.620204031 0.620204031 0 CG5674 FBtr0290267|FBtr0081021|FBtr0340182|FBtr0081022 17973392|17973392|17973392|17972122 17974868|17974868|17974868|17974868 2L + 17973591 17973619 3'utr CG5674 FlyBase G5044.1 AGAGAGCTATGTGGTGCTGAAAATGCAAT 6 17973602 0.682697517 2 6 28 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2L:17973591-17973619 7 CG5674 FBtr0340182|FBtr0081022|FBtr0290267|FBtr0081021 17973392|17972122|17973392|17973392 17974868|17974868|17974868|17974868 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 2L + 17973587 17973616 3'utr CG5674 FlyBase G3923.1 AAGCAGAGAGCTATGTGGTGCTGAAAATGC 5 17973602 0.938693162 3 4 24 1 0.84509804 0.285714286 0.2 0.428571429 5 0 0 7 2L:17973587-17973616 7 5.5 361 FBgn0032656 133.77 5.08 7.833333333 0.041115347 1.082677165 0.70212766 0 0 0 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 17974325 17974331 + 2L_17974325_17974331_+ 0.801970437 0.801970437 0.801970437 0 CG5674 FBtr0290267|FBtr0290267|FBtr0290267|FBtr0081021|FBtr0081021|FBtr0081021|FBtr0340182|FBtr0340182|FBtr0340182|FBtr0081022|FBtr0081022|FBtr0081022 17973392|17973392|17973392|17973392|17973392|17973392|17973392|17973392|17973392|17972122|17972122|17972122 17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868 2L + 17974295 17974344 3'utr CG5674 FlyBase G5045.1 TTATTTTGTATCTTTGGACTAAAAACACATTGTGATAAAATGCACCATGA 101 17974324 0.830697806 5 93 569 0.93495935 1.28254659 0.154471545 0.188118812 0.333333333 101 3 5 115 2L:17974295-17974344 7 CG5674 FBtr0340182|FBtr0340182|FBtr0340182|FBtr0081022|FBtr0081022|FBtr0081022|FBtr0290267|FBtr0290267|FBtr0290267|FBtr0081021|FBtr0081021|FBtr0081021 17973392|17973392|17973392|17972122|17972122|17972122|17973392|17973392|17973392|17973392|17973392|17973392 17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 17974288 17974353 3'utr CG5674 FlyBase G3924.1 AAATAGTTTATTTTGTATCTTTGGACTAAAAACACATTGTGATAAAATGCACCATGAGCTTTAGAG 75 17974324 0.810359648 6 72 415 0.971962617 1.414973348 0.186915888 0.32 0.523364486 75 0 3 104 2L:17974288-17974353 7 71.5 362 FBgn0032656 133.77 5.08 7.833333333 0.534499514 14.07480315 9.127659574 1 1 1 0.01 dme-miR-277-3p 6mer2-7 GCATTT 2L 17974650 17974655 + 2L_17974650_17974655_+ 1 1 1 0 CG5674 FBtr0290267|FBtr0081021|FBtr0340182|FBtr0081022 17973392|17973392|17973392|17972122 17974868|17974868|17974868|17974868 2L + 17974633 17974680 3'utr CG5674 FlyBase G5048.1 TGTCGTCATCGTTTCAAGCATTTCTCTGTTTTTTAGATATGTACGTAT 28 17974665 0.903990638 7 26 332 0.944444444 1.531478917 0.083333333 0.178571429 0.361111111 28 2 0 34 2L:17974633-17974680 6 CG5674 FBtr0340182|FBtr0081022|FBtr0290267|FBtr0081021 17973392|17972122|17973392|17973392 17974868|17974868|17974868|17974868 GCATTT 6mer2-7 dme-miR-277-3p 2L + 17974643 17974674 3'utr CG5674 FlyBase G3927.1 GTTTCAAGCATTTCTCTGTTTTTTAGATATGT 15 17974665 0.727934446 5 14 176 0.95 1.278753601 0.2 0.333333333 0.5 15 1 0 19 2L:17974643-17974674 6 19.5 363 FBgn0032656 133.77 5.08 7.833333333 0.145772595 3.838582677 2.489361702 -15 -15 -15 0.01 dme-miR-12-5p 6mer3-8 AATACT 2L 17974708 17974713 + 2L_17974708_17974713_+ 1 1 1 0 CG5674 FBtr0290267|FBtr0081021|FBtr0340182|FBtr0081022 17973392|17973392|17973392|17972122 17974868|17974868|17974868|17974868 2L + 17974683 17974741 3'utr CG5674 FlyBase G5049.1 TGTTTAGCTAAGTGATAGGAGACACAATACTTGCAAGTTTAGGATGATACGATCTACAA 17 17974710 0.963778407 5 17 91 1 1.301029996 0.1 0.176470588 0.3 17 0 0 20 2L:17974683-17974741 6 CG5674 FBtr0340182|FBtr0081022|FBtr0290267|FBtr0081021 17973392|17972122|17973392|17973392 17974868|17974868|17974868|17974868 AATACT 6mer3-8 dme-miR-12-5p 2L + 17974682 17974733 3'utr CG5674 FlyBase G3928.1 TTGTTTAGCTAAGTGATAGGAGACACAATACTTGCAAGTTTAGGATGATACG 11 17974710 0.978394521 5 9 62 0.875 1.146128036 0.25 0.454545455 0.625 11 2 0 14 2L:17974682-17974733 6 11 364 FBgn0032656 133.77 5.08 7.833333333 0.082230694 2.165354331 1.404255319 -2 -2 -2 0.01 dme-miR-304-5p 7mer-m8 TGAGATT 2L 18129026 18129032 + 2L_18129026_18129032_+ 0.620203442 0.620203442 0.620203442 0 CG5758 FBtr0081037|FBtr0340577|FBtr0340575|FBtr0081036|FBtr0081035|FBtr0340576 18128943|18128943|18128943|18128943|18128943|18128943 18129862|18129862|18129862|18129862|18129862|18129862 2L + 18128986 18129128 3'utr CG5758 FlyBase G5059.1 TATCGCGATGGTAAATGCGAAAATAACACAGGCGGCACTTTGAGATTGTTTTTGGGATCCCTCAATCGGCCTTCGAGTCTTGTATCAGTCTATTTCCGAAGTAGGAGACATTCCAGGCCCTTCGACAATTAGTCTATTGTCGC 39 18129025 0.978304154 14 39 258 1 1.681241237 0.0625 0.179487179 0.333333333 39 0 0 48 2L:18128986-18129128 7 CG5758 FBtr0081035|FBtr0340576|FBtr0340575|FBtr0081036|FBtr0081037|FBtr0340577 18128943|18128943|18128943|18128943|18128943|18128943 18129862|18129862|18129862|18129862|18129862|18129862 TGAGATT 7mer-m8 dme-miR-304-5p 2L + 18129013 18129071 3'utr CG5758 FlyBase G3934.1 ACAGGCGGCACTTTGAGATTGTTTTTGGGATCCCTCAATCGGCCTTCGAGTCTTGTATC 9 18129025 0.954842385 7 9 67 1 1.146128036 0 0.444444444 0.642857143 9 0 0 14 2L:18129013-18129071 7 11 365 FBgn0032666 5 0.196666667 0.306666667 2.2 55.93220339 35.86956522 1 1 1 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 18129181 18129186 + 2L_18129181_18129186_+ 1 1 1 0 CG5758 FBtr0081037|FBtr0340577|FBtr0340575|FBtr0081036|FBtr0081035|FBtr0340576 18128943|18128943|18128943|18128943|18128943|18128943 18129862|18129862|18129862|18129862|18129862|18129862 2L + 18129136 18129353 3'utr CG5758 FlyBase G5060.1 TATTTTGGCAATTAATTAGCAGTATGTACAATATTTTTTTGCAATTGATCTGCGTTAGAGGAACGAATGTGAGAGGGAGGCGAGCGCTAAAAGCGTTTTTGTATAGTTCTGGGCTAATTTTGTAACGAATTTTTCTAGTTTAGTTCTTAGTTTTTCATGTATGTTTTAAGTTTAGCATTGAACGAGGCGGTGAAACGAAGTATACTACAAAGTCAACA 213 18129182 0.98306767 26 209 1617 0.984063745 2.392696953 0.470119522 0.145539906 0.274900398 213 4 0 247 2L:18129136-18129353 6 CG5758 FBtr0081035|FBtr0340576|FBtr0340575|FBtr0081036|FBtr0081037|FBtr0340577 18128943|18128943|18128943|18128943|18128943|18128943 18129862|18129862|18129862|18129862|18129862|18129862 TGATCT 6mer3-8 dme-bantam-3p 2L + 18129134 18129221 3'utr CG5758 FlyBase G3936.1 ATTATTTTGGCAATTAATTAGCAGTATGTACAATATTTTTTTGCAATTGATCTGCGTTAGAGGAACGAATGTGAGAGGGAGGCGAGCG 109 18129182 0.983885704 10 100 743 0.921212121 1.704722333 0.503030303 0.311926606 0.545454545 109 11 2 152 2L:18129134-18129221 6 137 366 FBgn0032666 5 0.196666667 0.306666667 27.4 696.6101695 446.7391304 -1 -1 -1 0.01 dme-miR-190-5p 7mer-m8 ACATATC 2L 18129633 18129639 + 2L_18129633_18129639_+ 0.672777889 0.674514898 0.673646394 0.001228244 CG5758 FBtr0081037|FBtr0340577|FBtr0340575|FBtr0081036|FBtr0081035|FBtr0340576 18128943|18128943|18128943|18128943|18128943|18128943 18129862|18129862|18129862|18129862|18129862|18129862 2L + 18129558 18129813 3'utr CG5758 FlyBase G5063.1 ACGTATACTATGCACATTAGCGCTCATCAGTGTTTATGCTTTTTTGAGTCTATCCATATGAGGGAGCATAGGAAAACATATCGGCTAAATCGGCGAATCGAGCCTAGAGCGACCAAAATTCAAACGCAAAAATCCCTGGCATGATATATCTATAGAACGAGTATATTACGAACAGATATTGTATTTTTTAATTTACGGTATTGATATTTAATGTATCTGTGTATATGAACAACAAAGCAATGAGAACGGAGCATCC 51 18129603 0.99998262 26 49 395 0.96875 1.491361694 0.046875 0.235294118 0.390625 51 1 1 62 2L:18129558-18129813 7 CG5758 FBtr0081035|FBtr0340576|FBtr0340575|FBtr0081036|FBtr0081037|FBtr0340577 18128943|18128943|18128943|18128943|18128943|18128943 18129862|18129862|18129862|18129862|18129862|18129862 ACATATC 7mer-m8 dme-miR-190-5p 2L + 18129563 18129647 3'utr CG5758 FlyBase G3939.1 TACTATGCACATTAGCGCTCATCAGTGTTTATGCTTTTTTGAGTCTATCCATATGAGGGAGCATAGGAAAACATATCGGCTAAAT 24 18129603 0.990060007 9 17 173 0.743589744 1.161368002 0.128205128 0.434782609 0.666666667 23 9 1 29 2L:18129563-18129647 7 2.5 367 FBgn0032666 5 0.196666667 0.306666667 0.5 12.71186441 8.152173913 30 30 30 0.01 dme-miR-305-5p 6mer2-7 GTACAA 2L 18130050 18130055 - 2L_18130050_18130055_- 1 1 1 0 kel FBtr0081043|FBtr0081042 18129882|18129882 18130773|18133613 2L - 18130035 18130158 3'utr kel FlyBase G11245.1 ACTCAAATTTCCATTACCCCATGGCATTTGGCACATGGACCGCTTCGTTTCAGTATGTTAAGTTATGGCTTTAAACCGGAACAATAATATTTAGCCAACTATTGTACAAGCTCTCCACTAGAAT 48 18130057 0.975265359 11 47 299 1 1.716003344 0.057692308 0.083333333 0.153846154 48 0 0 52 2L:18130035-18130158 6 kel FBtr0081043|FBtr0081042 18129882|18129882 18130773|18133613 GTACAA 6mer2-7 dme-miR-305-5p 2L - 18130013 18130097 3'utr kel FlyBase G8649.1 GTTATGGCTTTAAACCGGAACAATAATATTTAGCCAACTATTGTACAAGCTCTCCACTAGAATCCTATTGTTTAAGTCAATTAGA 28 18130057 0.976181702 5 26 159 0.921568627 1.672097858 0.137254902 0.5 0.725490196 28 4 0 47 2L:18130013-18130097 6 29.5 368 FBgn0001301 597.3333333 13.11666667 20.1 0.049386161 2.249047014 1.467661692 2 2 2 0.01 dme-bantam-3p 7mer-A1 GATCTCA 2L 18130470 18130476 - 2L_18130470_18130476_- 0.823349562 0.823349562 0.823349562 0 kel FBtr0081043|FBtr0081042 18129882|18129882 18130773|18133613 2L - 18130442 18130507 3'utr kel FlyBase G11247.1 TTTCTAATTACAACGCTGCTCTACAAAATTGGATCTCAAAACAATACAAGCATAACGAATCGACCA 383 18130478 0.984834489 5 375 3033 0.976905312 2.325310372 0.018475751 0.104438642 0.207852194 383 9 1 423 2L:18130442-18130507 7 kel FBtr0081043|FBtr0081042 18129882|18129882 18130773|18133613 GATCTCA 7mer-A1 dme-bantam-3p 2L - 18130442 18130506 3'utr kel FlyBase G8652.1 TTCTAATTACAACGCTGCTCTACAAAATTGGATCTCAAAACAATACAAGCATAACGAATCGACCA 192 18130478 0.951201856 8 184 1509 0.957692308 2.396199347 0.034615385 0.270833333 0.461538462 192 11 0 249 2L:18130442-18130506 7 280 369 FBgn0001301 597.3333333 13.11666667 20.1 0.46875 21.34688691 13.93034826 2 2 2 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 2L 18130728 18130733 - 2L_18130728_18130733_- 1 0.999999937 0.999999968 7.07E-08 kel FBtr0081043|FBtr0081042 18129882|18129882 18130773|18133613 2L - 18130709 18130792 stop_codon kel FlyBase G11248.1 GAACGAGCACAATGATTAAATGTGGATAAAATAAGTTGCTTCTGGTAGATCAGCGTTGTAGTTAAAATATTTAAGTATGGAGTT 54 18130751 0.989501366 13 49 476 0.895522388 1.77815125 0.208955224 0.240740741 0.388059701 54 7 0 60 2L:18130709-18130792 6 kel FBtr0081043|FBtr0081042 18129882|18129882 18130773|18133613 AGTTAA 6mer3-8 dme-miR-999-3p 2L - 18130721 18130761 3'utr kel FlyBase G8653.1 TAAGTTGCTTCTGGTAGATCAGCGTTGTAGTTAAAATATTT 39 18130750 0.775138111 7 35 334 0.90625 1.763427994 0.1875 0.435897436 0.65625 39 6 0 58 2L:18130721-18130761 6 45 370 FBgn0001301 597.3333333 13.11666667 20.1 0.075334821 3.430749682 2.23880597 18 17 17.5 0.01 dme-miR-184-5p 6mer3-8 TGATAA 2L 18130853 18130858 - 2L_18130853_18130858_- 1 1 1 0 kel FBtr0081042 18129882 18133613 2L - 18130798 18130877 3'utr kel FlyBase G11249.1 TAGATCCTGTCAGCTTAAGTGATAACGAGACTGAGACAACCAGCAGTCAAAACAACCTTCCAAGCACTACCAACAGCAAT 28 18130861 0.931365828 7 25 126 0.911764706 1.190331698 0.029411765 0.214285714 0.352941176 28 2 1 31 2L:18130798-18130877 6 kel FBtr0081042 18129882 18133613 TGATAA 6mer3-8 dme-miR-184-5p 2L - 18130831 18130876 3'utr kel FlyBase G8655.1 AGATCCTGTCAGCTTAAGTGATAACGAGACTGAGACAACCAGCAGT 15 18130862 0.958700917 5 14 69 0.884615385 1.361727836 0.115384615 0.4 0.653846154 15 3 0 23 2L:18130831-18130876 6 19.5 371 FBgn0001301 597.3333333 13.11666667 20.1 0.032645089 1.486658196 0.970149254 3 4 3.5 0.01 dme-miR-252-5p 6mer3-8 GTACTT 2L 18532142 18532147 - 2L_18532142_18532147_- 0.999843659 0.852583718 0.926213689 0.104128545 Pde11 FBtr0303163|FBtr0343830 18532023|18532023 18534130|18533334 2L - 18532120 18532171 3'utr Pde11 FlyBase G11321.1 TGTAATCCTTCTTTAGACTAGATTGTACTTTGTGAGTTTTGTTATTTATTGT 8 18532159 0.795966705 4 8 101 1 1 0 0.25 0.4 8 0 0 10 2L:18532120-18532171 6 Pde11 FBtr0343830|FBtr0303163 18532023|18532023 18533334|18534130 GTACTT 6mer3-8 dme-miR-252-5p 2L - 18532125 18532168 3'utr Pde11 FlyBase G8708.1 AATCCTTCTTTAGACTAGATTGTACTTTGTGAGTTTTGTTATTT 11 18532159 0.762208606 5 9 116 0.857142857 0.77815125 0.142857143 0.272727273 0.428571429 11 1 1 12 2L:18532125-18532168 6 8.5 372 FBgn0085370 2569.533333 47.93666667 73.66666667 0.003307994 0.177317294 0.115384615 12 12 12 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 18532523 18532528 - 2L_18532523_18532528_- 1 1 1 0 Pde11 FBtr0303163|FBtr0343830 18532023|18532023 18534130|18533334 2L - 18532494 18532582 3'utr Pde11 FlyBase G11323.1 TTATCTCTATGGGTACCAAAAGTCTAACTTTAGTAGCATTAACCAACCGCTTAGTGATGATGTTAGCTGTCAAGTAACGAGAAACCGAT 30 18532532 0.980472453 8 30 212 1 1.612783857 0.073170732 0.266666667 0.463414634 30 0 0 41 2L:18532494-18532582 6 Pde11 FBtr0343830|FBtr0303163 18532023|18532023 18533334|18534130 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L - 18532472 18532586 3'utr Pde11 FlyBase G8709.1 TGAATTATCTCTATGGGTACCAAAAGTCTAACTTTAGTAGCATTAACCAACCGCTTAGTGATGATGTTAGCTGTCAAGTAACGAGAAACCGATCCGATCGCGAGCCTAGATTGTA 22 18532532 0.977051825 10 21 134 0.965517241 1.447158031 0.068965517 0.227272727 0.413793103 22 1 0 28 2L:18532472-18532586 6 19 373 FBgn0085370 2569.533333 47.93666667 73.66666667 0.007394339 0.396356303 0.257918552 4 4 4 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 18532881 18532886 - 2L_18532881_18532886_- 1 1 1 0 Pde11 FBtr0303162|FBtr0303163|FBtr0343830|FBtr0112544|FBtr0343831|FBtr0112545 18532726|18532023|18532023|18532726|18532726|18532726 18534130|18534130|18533334|18533334|18533334|18533334 2L - 18532857 18532899 3'utr Pde11 FlyBase G11326.1 TATGTGTATATTCTGATCTGTGTGTGTTTGTAACTTAAATTTT 14 18532886 0.735108972 5 10 164 0.6875 0.740362689 0.5 0.142857143 0.25 14 4 1 11 2L:18532857-18532899 6 Pde11 FBtr0112545|FBtr0343831|FBtr0112544|FBtr0343830|FBtr0303163|FBtr0303162 18532726|18532726|18532726|18532023|18532023|18532726 18533334|18533334|18533334|18533334|18534130|18534130 TGATCT 6mer3-8 dme-bantam-3p 2L - 18532869 18532900 3'utr Pde11 FlyBase G8711.1 GTATGTGTATATTCTGATCTGTGTGTGTTTGT 12 18532886 0.761587683 4 8 122 0.928571429 1.113943352 0.642857143 0.083333333 0.214285714 12 1 0 13 2L:18532869-18532900 6 11 374 FBgn0085370 2569.533333 47.93666667 73.66666667 0.004280933 0.229469439 0.149321267 0 0 0 0.01 dme-miR-11-3p 7mer-m1 TGTGATG 2L 18533243 18533249 - 2L_18533243_18533249_- 0.535000064 0.535593435 0.535296749 0.000419526 Pde11 FBtr0303162|FBtr0303163|FBtr0343830|FBtr0112544|FBtr0343831|FBtr0112545 18532726|18532023|18532023|18532726|18532726|18532726 18534130|18534130|18533334|18533334|18533334|18533334 2L - 18533222 18533277 3'utr Pde11 FlyBase G11329.1 TTTAACATGATAACTCTTAAACCACATATGTGATGCCTAAAAGTATGCAAGAAATC 11 18533251 0.977564917 3 10 60 0.857142857 1.079181246 0.071428571 0.272727273 0.428571429 11 2 0 12 2L:18533222-18533277 7 Pde11 FBtr0112545|FBtr0343831|FBtr0112544|FBtr0343830|FBtr0303163|FBtr0303162 18532726|18532726|18532726|18532023|18532023|18532726 18533334|18533334|18533334|18533334|18534130|18534130 TGTGATG 7mer-m1 dme-miR-11-3p 2L - 18533234 18533331 3'utr Pde11 FlyBase G8713.1 CATCCCAATCTGGTGTGTTCCTAGAAACTCGGAAACAGATTAAAGGGGATCATATTTAACATGATAACTCTTAAACCACATATGTGATGCCTAAAAGT 15 18533251 0.848829717 7 14 93 0.961538462 1.397940009 0 0.333333333 0.615384615 15 1 0 25 2L:18533234-18533331 7 7.5 375 FBgn0085370 2569.533333 47.93666667 73.66666667 0.002918818 0.156456436 0.101809955 2 2 2 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC 2L 18533312 18533318 - 2L_18533312_18533318_- 0.650741965 0.661615645 0.656178805 0.007688796 Pde11 FBtr0303162|FBtr0303163|FBtr0343830|FBtr0112544|FBtr0343831|FBtr0112545 18532726|18532023|18532023|18532726|18532726|18532726 18534130|18534130|18533334|18533334|18533334|18533334 2L - 18533300 18533331 3'utr Pde11 FlyBase G11330.1 CATCCCAATCTGGTGTGTTCCTAGAAACTCGG 7 18533320 0.65789402 3 5 50 0.777777778 0.84509804 0 0.285714286 0.444444444 7 2 0 7 2L:18533300-18533331 7 Pde11 FBtr0112545|FBtr0343831|FBtr0112544|FBtr0343830|FBtr0303163|FBtr0303162 18532726|18532726|18532726|18532023|18532023|18532726 18533334|18533334|18533334|18533334|18534130|18534130 TGTGTTC 7mer-m8 dme-miR-317-3p 2L - 18533234 18533331 3'utr Pde11 FlyBase G8713.1 CATCCCAATCTGGTGTGTTCCTAGAAACTCGGAAACAGATTAAAGGGGATCATATTTAACATGATAACTCTTAAACCACATATGTGATGCCTAAAAGT 15 18533322 0.848829717 7 14 93 0.961538462 1.397940009 0 0.333333333 0.615384615 15 1 0 25 2L:18533234-18533331 7 6 376 FBgn0085370 2569.533333 47.93666667 73.66666667 0.002335054 0.125165148 0.081447964 2 4 3 0.01 dme-miR-980-3p 8mer-A1 GGCAGCTA 2L 18533435 18533442 - 2L_18533435_18533442_- 0.668734122 0.668734347 0.668734234 1.41E-07 Pde11 FBtr0303162|FBtr0303163 18532726|18532023 18534130|18534130 2L - 18533411 18533624 3'utr Pde11 FlyBase G11332.1 AGCACGGAATCGGGATTGGCAGTGCCAGCATCGGTGGTAGTGGGCTAATCAGCCTGACCACACCACTGCTGGCTATGGACAGTGATAGGATACCAAAAATCGTAGGCAAAATTGGAAATCTCGATGGCCTGCCCTTCGCCAATGGCATTGGAGGTCCACAAAATGGTCATGGGTTGCCCTTCGGCAGCTATCAGCATCATCATCATCACCAGCA 169 18533450 0.946060564 20 164 940 0.969387755 1.67669361 0.285714286 0.142011834 0.260204082 169 3 3 190 2L:18533411-18533624 8 Pde11 FBtr0303163|FBtr0303162 18532023|18532726 18534130|18534130 GGCAGCTA 8mer-A1 dme-miR-980-3p 2L - 18533416 18533465 3'utr Pde11 FlyBase G8714.1 AAAATGGTCATGGGTTGCCCTTCGGCAGCTATCAGCATCATCATCATCAC 29 18533451 0.793795703 6 25 204 0.88372093 1.579783597 0.534883721 0.379310345 0.581395349 29 5 0 38 2L:18533416-18533465 8 46 377 FBgn0085370 2569.533333 47.93666667 73.66666667 0.017902083 0.959599472 0.624434389 8 9 8.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2L 18533528 18533533 - 2L_18533528_18533533_- 1 1 1 0 Pde11 FBtr0303162|FBtr0303163 18532726|18532023 18534130|18534130 2L - 18533411 18533624 3'utr Pde11 FlyBase G11332.1 AGCACGGAATCGGGATTGGCAGTGCCAGCATCGGTGGTAGTGGGCTAATCAGCCTGACCACACCACTGCTGGCTATGGACAGTGATAGGATACCAAAAATCGTAGGCAAAATTGGAAATCTCGATGGCCTGCCCTTCGCCAATGGCATTGGAGGTCCACAAAATGGTCATGGGTTGCCCTTCGGCAGCTATCAGCATCATCATCATCACCAGCA 169 18533512 0.946060564 20 164 940 0.969387755 1.67669361 0.285714286 0.142011834 0.260204082 169 3 3 190 2L:18533411-18533624 6 Pde11 FBtr0303163|FBtr0303162 18532023|18532726 18534130|18534130 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 18533486 18533575 3'utr Pde11 FlyBase G8715.1 CAGCCTGACCACACCACTGCTGGCTATGGACAGTGATAGGATACCAAAAATCGTAGGCAAAATTGGAAATCTCGATGGCCTGCCCTTCGC 69 18533512 0.913085474 8 66 316 0.963302752 2.021189299 0.100917431 0.376811594 0.605504587 69 4 0 105 2L:18533486-18533575 6 21 378 FBgn0085370 2569.533333 47.93666667 73.66666667 0.00817269 0.43807802 0.285067873 -21 -21 -21 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2L 18594640 18594645 + 2L_18594640_18594645_+ 1 1 1 0 CG15160 FBtr0343825|FBtr0081070 18594208|18594208 18595429|18595429 2L + 18594612 18594666 3'utr CG15160 FlyBase G5077.1 TCAAGGGGAATCTAGGACAACACGTGCAAAGACTTTACACTTACACCCTCGACTT 8 18594647 0.978755523 2 6 45 1 1 0.3 0.25 0.4 8 0 0 10 2L:18594612-18594666 6 CG15160 FBtr0081070|FBtr0343825 18594208|18594208 18595429|18595429 AAGACT 6mer3-8 dme-miR-14-3p 2L + 18594610 18594691 3'utr CG15160 FlyBase G3951.1 CATCAAGGGGAATCTAGGACAACACGTGCAAAGACTTTACACTTACACCCTCGACTTAACTTATGTTTGTGTGTTGACATAG 10 18594647 0.97703442 6 9 57 0.95 1.278753601 0.25 0.6 0.8 10 1 0 19 2L:18594610-18594691 6 5.5 379 FBgn0032688 740.6666667 26.16333333 40.19333333 0.007425743 0.210217862 0.136838613 -7 -7 -7 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2L 18599774 18599779 - 2L_18599774_18599779_- 1 1 1 0 CG10413 FBtr0081080|FBtr0343829 18599753|18599753 18600609|18600609 2L - 18599754 18599910 3'utr CG10413 FlyBase G11351.1 GGACGGACATTGATCGATTGTCGTAGACAAGTGTTTTGTGTGTGTAAACTTTATGGAACTGTGACCTAGCTAATAATATAATAATTGATCACAGCATTCATTGTAATCGGTTCTTTCCAATATTTTAAATAAAGACTTAGCGATATGTATTTATGTA 32 18599774 0.966256522 15 31 251 0.974358974 1.579783597 0.051282051 0.15625 0.307692308 32 1 0 38 2L:18599754-18599910 6 CG10413 FBtr0343829|FBtr0081080 18599753|18599753 18600609|18600609 AAGACT 6mer3-8 dme-miR-14-3p 2L - 18599759 18599824 3'utr CG10413 FlyBase G8729.1 GATCACAGCATTCATTGTAATCGGTTCTTTCCAATATTTTAAATAAAGACTTAGCGATATGTATTT 15 18599774 0.831795305 6 14 128 1 1.322219295 0.095238095 0.266666667 0.476190476 15 0 0 21 2L:18599759-18599824 6 13 380 FBgn0032689 528.2066667 16.84 25.75 0.024611579 0.771971496 0.504854369 -5 -5 -5 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 18599962 18599967 - 2L_18599962_18599967_- 1 1 1 0 CG10413 FBtr0081080|FBtr0343829 18599753|18599753 18600609|18600609 2L - 18599921 18599982 3'utr CG10413 FlyBase G11352.1 TTGTGGTTGTAAAATTGATGATTTCATATTGCACTTAGTTTGTAATCCATTTTTGGAAGACC 13 18599943 0.991598997 8 12 138 0.928571429 1.113943352 0.071428571 0.076923077 0.142857143 13 1 0 13 2L:18599921-18599982 6 CG10413 FBtr0343829|FBtr0081080 18599753|18599753 18600609|18600609 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L - 18599888 18599974 3'utr CG10413 FlyBase G8731.1 GTAAAATTGATGATTTCATATTGCACTTAGTTTGTAATCCATTTTTGGAAGACCTTCACAGCTCGGACGGACATTGATCGATTGTCG 10 18599964 0.994864959 6 8 90 0.866666667 1.113943352 0.266666667 0.3 0.533333333 10 2 0 13 2L:18599888-18599974 6 6 381 FBgn0032689 528.2066667 16.84 25.75 0.01135919 0.356294537 0.233009709 -24 -3 -13.5 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2L 18600059 18600065 - 2L_18600059_18600065_- 0.521223855 0.521223855 0.521223855 0 CG10413 FBtr0081080|FBtr0343829 18599753|18599753 18600609|18600609 2L - 18600045 18600080 3'utr CG10413 FlyBase G11353.1 CGATATTAACCTCTTTGTGATTGATTATGAATATCT 24 18600066 0.621603319 4 22 235 0.911764706 0.889301703 0.058823529 0.291666667 0.5 24 0 3 31 2L:18600045-18600080 7 CG10413 FBtr0343829|FBtr0081080 18599753|18599753 18600609|18600609 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 18600045 18600094 3'utr CG10413 FlyBase G8732.1 AACGGAACTCACACCGATATTAACCTCTTTGTGATTGATTATGAATATCT 19 18600066 0.991504092 5 17 187 0.869565217 0.698970004 0 0.210526316 0.347826087 19 0 3 20 2L:18600045-18600094 7 21 382 FBgn0032689 528.2066667 16.84 25.75 0.039757166 1.247030879 0.815533981 1 1 1 0.01 dme-miR-184-5p 6mer3-8 TGATAA 2L 18600571 18600576 - 2L_18600571_18600576_- 1 1 1 0 CG10413 FBtr0081080|FBtr0343829 18599753|18599753 18600609|18600609 2L - 18600560 18600662 stop_codon CG10413 FlyBase G11356.1 CGCCCACCATTCTCGTCCATGGTGTCAGCACGGTGACCTCCACAACGCTCTAGACTTCGAATTGGAGATATTCGCGTTTCCATGAGTGATAAAATCCGGAGTG 53 18600580 0.808499054 8 50 331 0.936507937 1.469822016 0.587301587 0.188679245 0.317460317 53 3 1 59 2L:18600560-18600662 6 CG10413 FBtr0343829|FBtr0081080 18599753|18599753 18600609|18600609 TGATAA 6mer3-8 dme-miR-184-5p 2L - 18600528 18600696 stop_codon CG10413 FlyBase G8733.2 ATGGAACTGCTAACCGAACTGACCGCCGATTTGCCGCCCACCATTCTCGTCCATGGTGTCAGCACGGTGACCTCCACAACGCTCTAGACTTCGAATTGGAGATATTCGCGTTTCCATGAGTGATAAAATCCGGAGTGCAACCGGATTTAACCAATTGTGAGGGTGTATT 39 18600580 0.889122212 11 37 235 0.981132075 1.716003344 0.283018868 0.205128205 0.41509434 39 1 0 52 2L:18600528-18600696 6 27.5 383 FBgn0032689 528.2066667 16.84 25.75 0.052062955 1.633016627 1.067961165 4 4 4 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 18661256 18661263 + 2L_18661256_18661263_+ 0.650171355 0.650171355 0.650171355 0 MESR3 FBtr0343808|FBtr0343808|FBtr0343808|FBtr0329971|FBtr0329971|FBtr0329971|FBtr0329972|FBtr0329972|FBtr0329972|FBtr0081073|FBtr0081073|FBtr0081073 18661050|18661050|18661050|18661104|18661104|18661104|18661050|18661050|18661050|18661050|18661050|18661050 18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776 2L + 18661020 18661494 stop_codon MESR3 FlyBase G5088.1 TCGGACCCCCCAATCCCCAGCAGCATCGTTGAGTAGGGTCGGGCGCGTGGATCTGGAACACGAGCGCCCTATGGTGGCAGAACTGAATCTGCCTCGAAGCCACAACCCAACACAACCACGAAGAAATCCAGGAAAAACCAACCCTTAGTTCGTATGGCTAGTTATAGATCCATTTGTTATAGGCCTAAGTTATGCCAATGTGCGATCCGAGTGCGGAACTCGGCCAACACATTTATCTGTGATACGATTTAGGCGTCTTTACTTTAGAGAGGGATACTGATAACACAATTTGATAAAGAACATTTTTAAACGAAGAACATAGCAAATGAAGCGAGAGTTTTTGCAAGTTATTAAAACATATTAAGCGATTAACGTTTGTCGATAAGCAAGTTTTTTGTAAAACCTTTTCTAATATCACACATATACCCTTATGCATAATTATATTCGTACCATATAGTCCTGATATCTATCGAGT 1283 18661255 0.98555517 81 1160 9566 0.906088083 1.730844367 0.305051813 0.163678878 0.305051813 1283 120 25 1399 2L:18661020-18661494 8 MESR3 FBtr0081073|FBtr0081073|FBtr0081073|FBtr0329972|FBtr0329972|FBtr0329972|FBtr0329971|FBtr0329971|FBtr0329971|FBtr0343808|FBtr0343808|FBtr0343808 18661050|18661050|18661050|18661050|18661050|18661050|18661104|18661104|18661104|18661050|18661050|18661050 18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 18661173 18661408 3'utr MESR3 FlyBase G3962.2 ATGGCTAGTTATAGATCCATTTGTTATAGGCCTAAGTTATGCCAATGTGCGATCCGAGTGCGGAACTCGGCCAACACATTTATCTGTGATACGATTTAGGCGTCTTTACTTTAGAGAGGGATACTGATAACACAATTTGATAAAGAACATTTTTAAACGAAGAACATAGCAAATGAAGCGAGAGTTTTTGCAAGTTATTAAAACATATTAAGCGATTAACGTTTGTCGATAAGCAA 766 18661255 0.96837547 45 670 5377 0.886054422 1.762595214 0.308673469 0.392950392 0.604591837 766 117 17 1042 2L:18661173-18661408 8 589.5 384 FBgn0032694 1795.86 104.38 160.0933333 0.328254986 5.647633646 3.682227034 1 1 1 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA 2L 18661728 18661733 + 2L_18661728_18661733_+ 1 1 1 0 MESR3 FBtr0343808|FBtr0329971|FBtr0329972|FBtr0081073 18661050|18661104|18661050|18661050 18661776|18661776|18661776|18661776 2L + 18661629 18661772 3'utr MESR3 FlyBase G5090.1 ACATAAATATATATGCTATATTACACCTATCTATATATTATATATAGCTCTAAGCATTACATCATAGCCACTTGTCTGTATGAACTTCATATTTTGCCTGTGCAAAACAATCGCGAGAATCAAATAAAGCTGACAAAGAGAGCC 39 18661701 0.983022018 21 33 287 0.860465116 1.091080469 0.069767442 0.102564103 0.186046512 39 4 2 37 2L:18661629-18661772 6 MESR3 FBtr0081073|FBtr0329972|FBtr0329971|FBtr0343808 18661050|18661050|18661104|18661050 18661776|18661776|18661776|18661776 GTGCAA 6mer3-8 dme-miR-92b-3p 2L + 18661687 18661774 3'utr MESR3 FlyBase G3965.1 ACATCATAGCCACTTGTCTGTATGAACTTCATATTTTGCCTGTGCAAAACAATCGCGAGAATCAAATAAAGCTGACAAAGAGAGCCAA 15 18661704 0.982719571 8 13 102 0.846153846 1.342422681 0.076923077 0.466666667 0.692307692 15 4 0 22 2L:18661687-18661774 6 8 385 FBgn0032694 1795.86 104.38 160.0933333 0.00445469 0.076643035 0.04997085 27 24 25.5 0.01 dme-miR-995-5p 6mer3-8 AATTCG 2L 18684523 18684528 - 2L_18684523_18684528_- 1 1 1 0 msl-1 FBtr0081130 18683718 18685245 2L - 18684499 18684547 3'utr msl-1 FlyBase G11387.1 TTTTGGAGAAAAACAATGAAATTCGTAGACTTATATTTTTAAATATTTT 60 18684522 0.796462289 7 58 577 0.985074627 1.819543936 0.044776119 0.1 0.194029851 60 1 0 66 2L:18684499-18684547 6 msl-1 FBtr0081130 18683718 18685245 AATTCG 6mer3-8 dme-miR-995-5p 2L - 18684499 18684534 3'utr msl-1 FlyBase G8751.1 CAATGAAATTCGTAGACTTATATTTTTAAATATTTT 53 18684522 0.778774341 7 48 545 0.901234568 1.562292864 0.086419753 0.377358491 0.592592593 53 7 1 73 2L:18684499-18684534 6 55.5 386 FBgn0005617 2040.813333 60.53666667 92.9 0.02719504 0.916799736 0.597416577 -6 -6 -6 0.01 dme-miR-79-3p 7mer-A1 AGCTTTA 2L 18684620 18684626 - 2L_18684620_18684626_- 0.823349562 0.823349562 0.823349562 0 msl-1 FBtr0081130 18683718 18685245 2L - 18684561 18684647 3'utr msl-1 FlyBase G11388.1 TTAGATTGGTTAACTCATCTCAGCTTTATCACCTTTAAAATCGCCCGCACTAAAGTGATAAGAACACGAAAGATATTCACATAAGTT 35 18684628 0.991579344 4 30 316 0.780487805 1.204119983 0.073170732 0.085714286 0.219512195 35 8 1 32 2L:18684561-18684647 7 msl-1 FBtr0081130 18683718 18685245 AGCTTTA 7mer-A1 dme-miR-79-3p 2L - 18684600 18684664 3'utr msl-1 FlyBase G8752.1 TCAAACCAGTCGCTTAGTTAGATTGGTTAACTCATCTCAGCTTTATCACCTTTAAAATCGCCCGC 23 18684630 0.990693712 6 20 213 0.9375 1.176091259 0.1875 0.260869565 0.46875 23 1 1 30 2L:18684600-18684664 7 26.5 387 FBgn0005617 2040.813333 60.53666667 92.9 0.012985019 0.437751225 0.28525296 2 4 3 0.01 dme-miR-2a-2-5p 7mer-A1 GATGAGA 2L 18684905 18684911 - 2L_18684905_18684911_- 0.782911824 0.782911824 0.782911824 0 msl-1 FBtr0081130 18683718 18685245 2L - 18684860 18684924 3'utr msl-1 FlyBase G11390.1 TCGTTTCTTATGCGATGAGAGATCTTAAAAGGCAAGTAAATTGAGCTGTCCTATTCAAACATTTT 7 18684914 0.988381823 5 6 51 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 2L:18684860-18684924 7 msl-1 FBtr0081130 18683718 18685245 GATGAGA 7mer-A1 dme-miR-2a-2-5p 2L - 18684891 18684931 3'utr msl-1 FlyBase G8753.1 AGTTTTGTCGTTTCTTATGCGATGAGAGATCTTAAAAGGCA 7 18684914 0.812968305 3 7 57 1 1.041392685 0.090909091 0.285714286 0.545454545 7 0 0 11 2L:18684891-18684931 7 4.5 388 FBgn0005617 2040.813333 60.53666667 92.9 0.002205003 0.074335114 0.048439182 3 3 3 0.01 dme-miR-14-3p 7mer-m8 AAGACTG 2L 18685199 18685205 - 2L_18685199_18685205_- 0.671795832 0.671795832 0.671795832 0 msl-1 FBtr0081130|FBtr0343118 18683718|18684982 18685245|18685245 2L - 18685175 18685243 3'utr msl-1 FlyBase G11392.1 AGGAAACGCCTGGGGGATCTGATACTGGAGCTAAGCAGAAGACTGTCGGTTGGGGGAAGTCGTTGCGTT 20 18685195 0.714050345 7 16 96 0.772727273 0.753327667 0.136363636 0.1 0.181818182 20 3 2 17 2L:18685175-18685243 7 msl-1 FBtr0343118|FBtr0081130 18684982|18683718 18685245|18685245 AAGACTG 7mer-m8 dme-miR-14-3p 2L - 18685179 18685237 3'utr msl-1 FlyBase G8755.1 CGCCTGGGGGATCTGATACTGGAGCTAAGCAGAAGACTGTCGGTTGGGGGAAGTCGTTG 17 18685196 0.974253973 7 12 75 0.7 1.146128036 0.1 0.176470588 0.3 17 6 0 14 2L:18685179-18685237 7 13 389 FBgn0005617 2040.813333 60.53666667 92.9 0.006370009 0.214745884 0.139935414 -10 -9 -9.5 0.01 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2L 18697931 18697936 + 2L_18697931_18697936_+ 1 1 1 0 CG10338 FBtr0343108|FBtr0081096 18697884|18697884 18698571|18698571 2L + 18697874 18697946 stop_codon CG10338 FlyBase G5102.1 TGGAAGGTGTAGGAGAATGGTGACTTTGATTGCTAGATTTTGACCTTAGTTGCTTGCTTTGACCTGAAGAATT 53 18697931 0.713999041 6 50 395 0.949152542 1.447158031 0.13559322 0.094339623 0.186440678 53 2 1 56 2L:18697874-18697946 6 CG10338 FBtr0081096|FBtr0343108 18697884|18697884 18698571|18698571 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2L + 18697913 18697955 3'utr CG10338 FlyBase G3974.1 TTGACCTTAGTTGCTTGCTTTGACCTGAAGAATTAATTTCATT 25 18697931 0.731040271 4 24 197 0.951219512 1.591064607 0.195121951 0.48 0.682926829 25 2 0 39 2L:18697913-18697955 6 34.5 390 FBgn0032700 302.7966667 15.66333333 24.19 0.113937846 2.202596297 1.426209177 0 0 0 0.01 dme-miR-283-5p 8mer-A1 TGATATTA 2L 18698010 18698017 + 2L_18698010_18698017_+ 0.592192292 0.592192292 0.592192292 0 CG10338 FBtr0343108|FBtr0081096 18697884|18697884 18698571|18698571 2L + 18697947 18698031 3'utr CG10338 FlyBase G5103.1 AATTTCATTAGACTTCATTATCATTCTCACATATCTCACATGGCTACCATAGAGCGAAAACATTGATATTAACTAAGTGCTATTG 16 18698009 0.897352355 4 16 108 1 1.255272505 0.222222222 0.125 0.222222222 16 0 0 18 2L:18697947-18698031 8 CG10338 FBtr0081096|FBtr0343108 18697884|18697884 18698571|18698571 TGATATTA 8mer-A1 dme-miR-283-5p 2L + 18697977 18698020 3'utr CG10338 FlyBase G3975.1 ATATCTCACATGGCTACCATAGAGCGAAAACATTGATATTAACT 8 18698009 0.968120893 2 7 41 0.928571429 1.113943352 0 0.5 0.714285714 8 1 0 13 2L:18697977-18698020 8 8.5 391 FBgn0032700 302.7966667 15.66333333 24.19 0.028071643 0.542668653 0.35138487 1 1 1 0.01 dme-miR-79-3p 7mer-m8 TAGCTTT 2L 18698047 18698053 + 2L_18698047_18698053_+ 0.620204031 0.620204031 0.620204031 0 CG10338 FBtr0343108|FBtr0081096 18697884|18697884 18698571|18698571 2L + 18698034 18698104 3'utr CG10338 FlyBase G5104.1 ATTTACCTAGATTTAGCTTTGTGAATCTCGTTCGCACTTGAACATCTTCCAACTAACTCTGCCTTAGCACA 26 18698055 0.870797669 5 25 237 0.965517241 1.447158031 0.172413793 0.115384615 0.206896552 26 1 0 28 2L:18698034-18698104 7 CG10338 FBtr0081096|FBtr0343108 18697884|18697884 18698571|18698571 TAGCTTT 7mer-m8 dme-miR-79-3p 2L + 18698027 18698072 3'utr CG10338 FlyBase G3976.1 TATTGATATTTACCTAGATTTAGCTTTGTGAATCTCGTTCGCACTT 14 18698055 0.989808043 6 13 136 0.869565217 1.301029996 0.260869565 0.5 0.695652174 14 3 0 20 2L:18698027-18698072 7 17 392 FBgn0032700 302.7966667 15.66333333 24.19 0.056143286 1.085337306 0.70276974 -8 -8 -8 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 18700725 18700730 - 2L_18700725_18700730_- 1 1 1 0 CG10376 FBtr0081128 18700604 18701626 2L - 18700690 18700747 3'utr CG10376 FlyBase G11429.1 GATCCCACACAGATTAAGTACCTTTTTATACAAATCCAACGAACCTTTCATGCATTTT 13 18700723 0.983208014 3 12 92 1 1.255272505 0.166666667 0.307692308 0.5 13 0 0 18 2L:18700690-18700747 6 CG10376 FBtr0081128 18700604 18701626 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L - 18700686 18700750 3'utr CG10376 FlyBase G8780.1 AATGATCCCACACAGATTAAGTACCTTTTTATACAAATCCAACGAACCTTTCATGCATTTTATCG 15 18700723 0.983883696 5 14 109 0.944444444 0.929418926 0.055555556 0.2 0.333333333 15 0 1 17 2L:18700686-18700750 6 12 393 FBgn0032702 2337.326667 113.6933333 174.6866667 0.005134071 0.105547086 0.068694424 -7 -7 -7 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 18701315 18701321 - 2L_18701315_18701321_- 0.754178804 0.754178804 0.754178804 0 CG10376 FBtr0081128|FBtr0081128|FBtr0081128 18700604|18700604|18700604 18701626|18701626|18701626 2L - 18701307 18701334 3'utr CG10376 FlyBase G11433.1 CGCAATCGTTTAATGTGATACAACGAAA 6 18701322 0.680065494 5 6 35 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2L:18701307-18701334 7 CG10376 FBtr0081128|FBtr0081128|FBtr0081128 18700604|18700604|18700604 18701626|18701626|18701626 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 18701309 18701368 3'utr CG10376 FlyBase G8783.1 ATATAATCCATTTTCTAAAAGATTATTGAACGTACGCAATCGTTTAATGTGATACAACGA 5 18701322 0.977643299 4 5 39 1 0.698970004 0 0 0 5 0 0 5 2L:18701309-18701368 7 4.5 394 FBgn0032702 2337.326667 113.6933333 174.6866667 0.001925276 0.039580157 0.025760409 1 1 1 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 2L 18701559 18701565 - 2L_18701559_18701565_- 0.782911824 0.782911824 0.782911824 0 CG10376 FBtr0081128 18700604 18701626 2L - 18701546 18701587 3'utr CG10376 FlyBase G11434.1 CGCCTTGGGATGGGTTAATTTTGTACAAATTCAAAGCAACTT 10 18701568 0.925135535 5 8 87 0.923076923 0.77815125 0.076923077 0.2 0.384615385 10 0 1 12 2L:18701546-18701587 7 CG10376 FBtr0081128 18700604 18701626 GTACAAA 7mer-A1 dme-miR-305-5p 2L - 18701555 18701591 3'utr CG10376 FlyBase G8784.1 TACCCGCCTTGGGATGGGTTAATTTTGTACAAATTCA 6 18701567 0.917906071 3 5 48 1 0.84509804 0.428571429 0.166666667 0.285714286 6 0 0 7 2L:18701555-18701591 7 6.5 395 FBgn0032702 2337.326667 113.6933333 174.6866667 0.002780955 0.057171338 0.03720948 3 2 2.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 18704413 18704419 + 2L_18704413_18704419_+ 0.754178804 0.754178804 0.754178804 0 CG10343 FBtr0081098|FBtr0081098|FBtr0081098 18704335|18704335|18704335 18704454|18704454|18704454 2L + 18704368 18704427 3'utr CG10343 FlyBase G5115.1 CATCGAGGAAACCTTAAATTGAAATCAAAAGCCAATACTATTTTATGTGATAGAATAAAC 13 18704409 0.975584137 4 11 100 0.857142857 1.079181246 0.142857143 0.076923077 0.142857143 13 2 0 12 2L:18704368-18704427 7 CG10343 FBtr0081098|FBtr0081098|FBtr0081098 18704335|18704335|18704335 18704454|18704454|18704454 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 18704372 18704452 3'utr CG10343 FlyBase G3989.1 GAGGAAACCTTAAATTGAAATCAAAAGCCAATACTATTTTATGTGATAGAATAAACGCGAGTAACTGCATGGGCGGCTATC 7 18704409 0.98105319 4 7 43 1 1 0 0.428571429 0.6 7 0 0 10 2L:18704372-18704452 7 7 396 FBgn0032703 216.33 32.94333333 50.78 0.032357972 0.212486087 0.137849547 4 4 4 0.01 dme-miR-184-3p 6mer3-8 TCCGTC 2L 18706203 18706208 - 2L_18706203_18706208_- 1 1 1 0 Faf FBtr0343115 18706008 18706532 2L - 18706175 18706235 3'utr Faf FlyBase G11451.1 CGTTGTTATGTTAGCTGTACTTATACTTCCGTCTATTTAACGAATAATAGAGGCACATTCT 12 18706209 0.990508639 6 12 124 1 1.230448921 0.058823529 0.333333333 0.529411765 12 0 0 17 2L:18706175-18706235 6 Faf FBtr0343115 18706008 18706532 TCCGTC 6mer3-8 dme-miR-184-3p 2L - 18706197 18706228 3'utr Faf FlyBase G8798.1 ATGTTAGCTGTACTTATACTTCCGTCTATTTA 8 18706209 0.789001306 2 8 82 1 1.079181246 0 0.375 0.583333333 8 0 0 12 2L:18706197-18706228 6 9 397 FBgn0025608 1253.34 66.89333333 102.5866667 0.007180813 0.134542555 0.087730699 1 1 1 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 18706342 18706347 - 2L_18706342_18706347_- 1 1 1 0 Faf FBtr0343115 18706008 18706532 2L - 18706325 18706360 3'utr Faf FlyBase G11452.1 TAGGTTGATTCTCTGATCTGCCCAACACCATCAACC 6 18706344 0.727158865 3 6 36 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2L:18706325-18706360 6 Faf FBtr0343115 18706008 18706532 TGATCT 6mer3-8 dme-bantam-3p 2L - 18706322 18706359 3'utr Faf FlyBase G8799.1 AGGTTGATTCTCTGATCTGCCCAACACCATCAACCAAC 5 18706342 0.964017397 2 5 27 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 2L:18706322-18706359 6 5.5 398 FBgn0025608 1253.34 66.89333333 102.5866667 0.004388275 0.08222045 0.053613205 -3 -5 -4 0.01 dme-miR-980-3p 6mer3-8 GGCAGC 2L 18711278 18711283 - 2L_18711278_18711283_- 1 1 1 0 Irk3 FBtr0081125|FBtr0343114 18711069|18711069 18711336|18711336 2L - 18711248 18711297 3'utr Irk3 FlyBase G11464.1 CGCATTACACTTTTGGCAGCACTATATTAATAACGAATTCAAAAACATTT 8 18711284 0.988187978 3 7 62 1 0.954242509 0 0.125 0.222222222 8 0 0 9 2L:18711248-18711297 6 Irk3 FBtr0081125|FBtr0343114 18711069|18711069 18711336|18711336 GGCAGC 6mer3-8 dme-miR-980-3p 2L - 18711262 18711297 3'utr Irk3 FlyBase G8807.1 CGCATTACACTTTTGGCAGCACTATATTAATAACGA 5 18711284 0.950480016 2 4 32 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2L:18711262-18711297 6 5 399 FBgn0032706 11.00333333 0.756666667 1.173333333 0.454407755 6.607929515 4.261363636 1 1 1 0.01 dme-miR-184-5p 6mer3-8 TGATAA 2L 18833776 18833781 - 2L_18833776_18833781_- 1 1 1 0 CG10600 FBtr0273228|FBtr0081120|FBtr0331194 18833708|18833708|18833708 18834497|18834497|18834497 2L - 18833687 18833801 3'utr CG10600 FlyBase G11472.1 GCGTAGAACAATACACACATTGATAATTACTATATATATATATACCATATATAACTTTAGGACTAAGACAGCTTACACGTTGAAGAAACAATAAAGATTCGGATCGTACAAAATT 20 18833781 0.984725234 10 18 146 0.851851852 1.361727836 0.074074074 0.25 0.444444444 20 4 0 23 2L:18833687-18833801 6 CG10600 FBtr0331194|FBtr0081120|FBtr0273228 18833708|18833708|18833708 18834497|18834497|18834497 TGATAA 6mer3-8 dme-miR-184-5p 2L - 18833685 18833785 3'utr CG10600 FlyBase G8814.1 ACATTGATAATTACTATATATATATATACCATATATAACTTTAGGACTAAGACAGCTTACACGTTGAAGAAACAATAAAGATTCGGATCGTACAAAATTAG 12 18833775 0.981320813 9 12 89 1 1.301029996 0 0.416666667 0.65 12 0 0 20 2L:18833685-18833785 6 5.5 400 FBgn0032717 1261.5 29.36666667 45.24666667 0.004359889 0.187287174 0.121555916 0 -6 -3 0.01 dme-miR-318-3p 6mer3-8 CCCAGT 2L 18833846 18833851 - 2L_18833846_18833851_- 1 1 1 0 CG10600 FBtr0273228|FBtr0081120|FBtr0331194 18833708|18833708|18833708 18834497|18834497|18834497 2L - 18833826 18833851 3'utr CG10600 FlyBase G11473.1 CCCAGTTTGATTTCCTTCTCAACAAC 8 18833840 0.64628406 3 8 63 1 0.954242509 0.444444444 0.125 0.222222222 8 0 0 9 2L:18833826-18833851 6 CG10600 FBtr0331194|FBtr0081120|FBtr0273228 18833708|18833708|18833708 18834497|18834497|18834497 CCCAGT 6mer3-8 dme-miR-318-3p 2L - 18833826 18833871 3'utr CG10600 FlyBase G8815.1 ATAACAATACATTTAAAGGTCCCAGTTTGATTTCCTTCTCAACAAC 5 18833844 0.981847282 4 4 32 1 0.903089987 0 0.4 0.625 5 0 0 8 2L:18833826-18833871 6 5.5 401 FBgn0032717 1261.5 29.36666667 45.24666667 0.004359889 0.187287174 0.121555916 -11 -7 -9 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT 2L 18833929 18833934 - 2L_18833929_18833934_- 0.999998255 0.844417637 0.922207946 0.110012168 CG10600 FBtr0273228|FBtr0081120|FBtr0331194 18833708|18833708|18833708 18834497|18834497|18834497 2L - 18833915 18833962 3'utr CG10600 FlyBase G11474.1 AAGTTTTTTAATGCAGGCTGGTACACTGAGCTGTTATAGTGTGTATTT 5 18833936 0.9850188 3 4 39 0.8 0.602059991 0.2 0 0 5 1 0 4 2L:18833915-18833962 6 CG10600 FBtr0331194|FBtr0081120|FBtr0273228 18833708|18833708|18833708 18834497|18834497|18834497 AGCTGT 6mer3-8 dme-miR-1008-3p 2L - 18833916 18833962 3'utr CG10600 FlyBase G8816.1 AAGTTTTTTAATGCAGGCTGGTACACTGAGCTGTTATAGTGTGTATT 9 18833937 0.805101533 6 9 66 1 1.041392685 0.090909091 0.111111111 0.272727273 9 0 0 11 2L:18833916-18833962 6 5 402 FBgn0032717 1261.5 29.36666667 45.24666667 0.003963535 0.170261067 0.110505378 2 3 2.5 0.01 dme-miR-283-5p 6mer2-7 GATATT 2L 18834198 18834203 - 2L_18834198_18834203_- 1 1 1 0 CG10600 FBtr0273228|FBtr0081120|FBtr0331194 18833708|18833708|18833708 18834497|18834497|18834497 2L - 18834178 18834256 3'utr CG10600 FlyBase G11476.1 GCAGGAGTCGCTATTATACCATTTATTTTGAAAATTGTTATTCCTTGTTCTGCGATATTGAGCAGCCACAGTTTTGTGC 23 18834208 0.990206449 8 22 221 0.962962963 1.414973348 0.296296296 0.173913043 0.296296296 23 1 0 26 2L:18834178-18834256 6 CG10600 FBtr0331194|FBtr0081120|FBtr0273228 18833708|18833708|18833708 18834497|18834497|18834497 GATATT 6mer2-7 dme-miR-283-5p 2L - 18834183 18834226 3'utr CG10600 FlyBase G8818.1 AAAATTGTTATTCCTTGTTCTGCGATATTGAGCAGCCACAGTTT 18 18834208 0.991854551 4 14 163 0.878787879 0.860338007 0.090909091 0.555555556 0.757575758 18 1 3 29 2L:18834183-18834226 6 17.5 403 FBgn0032717 1261.5 29.36666667 45.24666667 0.013872374 0.595913734 0.386768823 5 5 5 0.01 dme-bantam-3p 7mer-A1 GATCTCA 2L 18834354 18834360 - 2L_18834354_18834360_- 0.823349562 0.823349562 0.823349562 0 CG10600 FBtr0273228|FBtr0081120|FBtr0331194 18833708|18833708|18833708 18834497|18834497|18834497 2L - 18834334 18834394 3'utr CG10600 FlyBase G11477.1 AACGGATTTCGAGTAGCTGAATCCTTTAAAGGAAGATCTCAACTCTGAAAGGGATTTCAAT 25 18834371 0.670145898 10 25 145 1 1.477121255 0.066666667 0.16 0.3 25 0 0 30 2L:18834334-18834394 7 CG10600 FBtr0331194|FBtr0081120|FBtr0273228 18833708|18833708|18833708 18834497|18834497|18834497 GATCTCA 7mer-A1 dme-bantam-3p 2L - 18834309 18834395 3'utr CG10600 FlyBase G8819.1 AAACGGATTTCGAGTAGCTGAATCCTTTAAAGGAAGATCTCAACTCTGAAAGGGATTTCAATACTTACTGAAGGTTGGCCATACAAT 21 18834373 0.930348484 9 18 128 0.766666667 0.662757832 0.1 0.333333333 0.533333333 21 3 4 23 2L:18834309-18834395 7 12.5 404 FBgn0032717 1261.5 29.36666667 45.24666667 0.009908839 0.425652667 0.276263445 11 13 12 0.01 dme-miR-282-5p 7mer-m8 AGAGGCT 2L 18834458 18834464 - 2L_18834458_18834464_- 0.631524569 0.631524569 0.631524569 0 CG10600 FBtr0273228|FBtr0081120|FBtr0331194 18833708|18833708|18833708 18834497|18834497|18834497 2L - 18834425 18834570 stop_codon CG10600 FlyBase G11478.1 CTCATCATCGACATCCTCGGCAACAACGAATAGTTCGCTCTCCTCTTACGCCGGTTCCAACAATAGCTTTTGAAACTGGGAAAAGAAATGGACGGAAAGCGAGAGTAGAGGCTCCTATTTGGACTTTATGTGAAACTATATATTTT 271 18834465 0.97438594 18 269 1661 0.993865031 2.51054501 0.457055215 0.162361624 0.303680982 271 2 0 324 2L:18834425-18834570 7 CG10600 FBtr0331194|FBtr0081120|FBtr0273228 18833708|18833708|18833708 18834497|18834497|18834497 AGAGGCT 7mer-m8 dme-miR-282-5p 2L - 18834419 18834523 stop_codon CG10600 FlyBase G8820.1 ACGCCGGTTCCAACAATAGCTTTTGAAACTGGGAAAAGAAATGGACGGAAAGCGAGAGTAGAGGCTCCTATTTGGACTTTATGTGAAACTATATATTTTGTAAAT 195 18834451 0.912020358 16 187 1261 0.964788732 1.960629308 0.461267606 0.317948718 0.531690141 195 8 2 274 2L:18834419-18834523 7 206 405 FBgn0032717 1261.5 29.36666667 45.24666667 0.163297662 7.014755959 4.552821571 1 -13 -6 0.01 dme-miR-317-3p 7mer-A1 GTGTTCA 2L 18951229 18951235 - 2L_18951229_18951235_- 0.823349562 0.823349562 0.823349562 0 Nedd8 FBtr0342928|FBtr0081192 18951004|18951145 18951240|18951240 2L - 18951217 18951300 stop_codon Nedd8 FlyBase G11525.1 GTTCTTCACTTGGTATTGGCTCTGCGAGGAGGTGATTCAATCCTAACACCTTGTGTGTAACTAGCGTGTTCATAAGTGGAAAAC 10 18951228 0.988259449 6 8 75 0.916666667 0.740362689 0.416666667 0.2 0.333333333 10 0 1 11 2L:18951217-18951300 7 Nedd8 FBtr0342928 18951004 18951240 GTGTTCA 7mer-A1 dme-miR-317-3p 2L - 18951171 18951242 stop_codon Nedd8 FlyBase G8850.1 AACTAGCGTGTTCATAAGTGGAAAACATTCATTTAAAATTCACTCAAATATATTAAGCTTGAGAAGCGTCAT 7 18951229 0.954417196 5 7 36 1 1 0.1 0.428571429 0.6 7 0 0 10 2L:18951171-18951242 7 4.5 406 FBgn0032725 237 52.96333333 80.68 0.018987342 0.084964441 0.055775905 -7 -6 -6.5 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2L 18957924 18957930 - 2L_18957924_18957930_- 0.443131018 0.443131018 0.443131018 0 Nak FBtr0340325|FBtr0081187 18957730|18957898 18958299|18958299 2L - 18957907 18957952 3'utr Nak FlyBase G11531.1 ATTATATATTTATACAAAACTATGTGATTATACACCCACACCCAAT 28 18957923 0.971102071 3 28 172 1 1.556302501 0 0.285714286 0.444444444 28 0 0 36 2L:18957907-18957952 7 Nak FBtr0081187|FBtr0340325 18957898|18957730 18958299|18958299 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 18957907 18957945 3'utr Nak FlyBase G8855.1 ATTTATACAAAACTATGTGATTATACACCCACACCCAAT 21 18957923 0.972774494 4 20 122 0.966666667 1.161368002 0 0.285714286 0.5 21 0 1 29 2L:18957907-18957945 7 24.5 407 FBgn0015772 651.1433333 17.45333333 26.77666667 0.037626124 1.403743316 0.914975725 -7 -7 -7 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA 2L 18958064 18958069 - 2L_18958064_18958069_- 1 1 1 0 Nak FBtr0340325|FBtr0081187 18957730|18957898 18958299|18958299 2L - 18957985 18958090 3'utr Nak FlyBase G11532.1 AATACCTATAACTGTTATTTAGTGCAAAAATTTAAACTAGTTTTAGAAGCGAAACATGTTTTAGAATTTATACAGTGCGTAAGTTTACCAAAGTTACATTTATTTT 21 18958072 0.985143957 8 20 171 0.96 1.380211242 0.04 0.19047619 0.32 21 1 0 24 2L:18957985-18958090 6 Nak FBtr0081187|FBtr0340325 18957898|18957730 18958299|18958299 GTGCAA 6mer3-8 dme-miR-92b-3p 2L - 18958058 18958096 3'utr Nak FlyBase G8856.1 AAGAACAATACCTATAACTGTTATTTAGTGCAAAAATTT 8 18958072 0.698491242 4 8 76 1 1.176091259 0 0.375 0.666666667 8 0 0 15 2L:18958058-18958096 6 11 408 FBgn0015772 651.1433333 17.45333333 26.77666667 0.016893362 0.630252101 0.410805428 3 3 3 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 2L 18958258 18958264 - 2L_18958258_18958264_- 0.823349562 0.823349562 0.823349562 0 Nak FBtr0340325|FBtr0081187 18957730|18957898 18958299|18958299 2L - 18958245 18958292 3'utr Nak FlyBase G11533.2 AGTGGGGCGAGACCATCAAGGAGACCTGAGACTGAGTGTTTCAAATTA 165 18958266 0.966311253 6 159 540 0.961904762 2.305351369 0.138095238 0.224242424 0.39047619 165 8 0 202 2L:18958245-18958292 7 Nak FBtr0081187|FBtr0340325 18957898|18957730 18958299|18958299 AGACTGA 7mer-A1 dme-miR-14-3p 2L - 18958246 18958292 3'utr Nak FlyBase G8858.1 AGTGGGGCGAGACCATCAAGGAGACCTGAGACTGAGTGTTTCAAATT 98 18958266 0.958550746 4 91 307 0.942857143 1.643452676 0.078571429 0.326530612 0.528571429 98 6 2 132 2L:18958246-18958292 7 129 409 FBgn0015772 651.1433333 17.45333333 26.77666667 0.198113063 7.391138273 4.817627287 2 2 2 0.01 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 18961469 18961476 - 2L_18961469_18961476_- 0.625364009 0.625364009 0.625364009 0 Nak FBtr0340326|FBtr0081189 18960925|18961114 18962750|18962873 2L - 18961463 18961492 3'utr Nak FlyBase G11544.1 AATTGAAATGTTCAATTAGCTTTAATTACT 12 18961477 0.785599795 2 12 109 1 1.204119983 0.25 0.166666667 0.375 12 0 0 16 2L:18961463-18961492 8 Nak FBtr0081189|FBtr0340326 18961114|18960925 18962873|18962750 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 18961453 18961525 3'utr Nak FlyBase G8866.1 TGATCACTTTTGTTCTCTACACACAGACACACCAATTGAAATGTTCAATTAGCTTTAATTACTACTCTTGTTA 10 18961477 0.985264676 5 9 84 0.9375 1.176091259 0.0625 0.3 0.5625 10 1 0 15 2L:18961453-18961525 8 8.5 410 FBgn0015772 651.1433333 17.45333333 26.77666667 0.013053961 0.487012987 0.317440558 1 1 1 0.01 dme-miR-8-3p 7mer-m8 CAGTATT 2L 18977655 18977661 - 2L_18977655_18977661_- 0.661615243 0.661615243 0.661615243 0 Swip-1 FBtr0340322 18977517 18978354 2L - 18977634 18977685 3'utr Swip-1 FlyBase G11555.2 AAAGTAAAACAATAAGTTTCGATTCAGTATTTCACGTTTAAAGTTAGCGATT 72 18977663 0.780386058 7 64 605 0.875 1.886490725 0.056818182 0.208333333 0.352272727 72 11 0 77 2L:18977634-18977685 7 Swip-1 FBtr0340322 18977517 18978354 CAGTATT 7mer-m8 dme-miR-8-3p 2L - 18977594 18977690 3'utr Swip-1 FlyBase G8872.1 AGCCTAAAGTAAAACAATAAGTTTCGATTCAGTATTTCACGTTTAAAGTTAGCGATTTAAGCAATACTAATGCGTTAAATACGAATACACAAGAAAA 69 18977663 0.98739128 9 65 564 0.944954128 1.53571597 0.082568807 0.449275362 0.651376147 69 4 2 103 2L:18977594-18977690 7 66 411 FBgn0032731 3016.77 219.0933333 334.6766667 0.021877704 0.30124148 0.197205263 2 2 2 0.01 dme-miR-965-3p 7mer-m8 TACGCTT 2L 18978265 18978271 - 2L_18978265_18978271_- 0.620204855 0.620204855 0.620204855 0 Swip-1 FBtr0340322 18977517 18978354 2L - 18978156 18978317 3'utr Swip-1 FlyBase G11557.2 CTGGCGTAGGTTAATCGAATGTGGAACTAATCCCGGGAGAAGAGGATACGCTTCGTACAAGCATTTTTCAAGCATCACATACTCTAATTATATTCATACTTATCGCCCCATACATATAAAAACTCGATTTGCTGGCAAAAACATCTTGGGAATTGAATGTTA 752 18978287 0.85864425 31 706 2827 0.953810624 2.01389006 0.282909931 0.123670213 0.239030023 752 33 7 826 2L:18978156-18978317 7 Swip-1 FBtr0340322 18977517 18978354 TACGCTT 7mer-m8 dme-miR-965-3p 2L - 18978140 18978356 stop_codon Swip-1 FlyBase G8874.1 AGAGGACTTAGGTTCGCCCTTAGTCTAGCGAGTAATTATCTGGCGTAGGTTAATCGAATGTGGAACTAATCCCGGGAGAAGAGGATACGCTTCGTACAAGCATTTTTCAAGCATCACATACTCTAATTATATTCATACTTATCGCCCCATACATATAAAAACTCGATTTGCTGGCAAAAACATCTTGGGAATTGAATGTTATCTTTGACTAATGTTT 420 18978287 0.86937726 31 400 1625 0.957841484 2.055378331 0.291736931 0.302380952 0.505902192 420 21 4 568 2L:18978140-18978356 7 301 412 FBgn0032731 3016.77 219.0933333 334.6766667 0.099775588 1.37384372 0.899375517 16 16 16 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 19008169 19008176 + 2L_19008169_19008176_+ 0.500120318 0.500120318 0.500120318 0 CG31793 FBtr0340318|FBtr0081138 19008052|19008052 19008234|19008234 2L + 19008129 19008187 3'utr CG31793 FlyBase G5156.1 TCGTGGTCATAGATTCAGTTTTATAGAATACAAAACGTTTGTACTTAAGGGAGTAAAGC 19 19008168 0.797798843 3 19 146 1 1.342422681 0.045454545 0.157894737 0.272727273 19 0 0 22 2L:19008129-19008187 8 CG31793 FBtr0081138|FBtr0340318 19008052|19008052 19008234|19008234 GTACTTAA 8mer-A1 dme-miR-252-5p 2L + 19008131 19008187 3'utr CG31793 FlyBase G4010.1 GTGGTCATAGATTCAGTTTTATAGAATACAAAACGTTTGTACTTAAGGGAGTAAAGC 11 19008142 0.976547565 3 11 84 1 1.146128036 0.142857143 0.272727273 0.428571429 11 0 0 14 2L:19008131-19008187 8 8 413 FBgn0051793 240.37 6.446666667 9.863333333 0.033282024 1.240951396 0.811084826 1 27 14 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2L 19041185 19041191 + 2L_19041185_19041191_+ 0.671796082 0.671796082 0.671796082 0 mib2 FBtr0336840|FBtr0336841|FBtr0081142 19041121|19041121|19041121 19041473|19041541|19041541 2L + 19041148 19041201 3'utr mib2 FlyBase G5180.1 AGCAAAGGCGGCAGGATCAGCAGCAATTCAAACAGCAACCAAAGTGGCTTGTAT 9 19041194 0.924647342 3 9 30 1 1 0 0.111111111 0.2 9 0 0 10 2L:19041148-19041201 7 mib2 FBtr0336840|FBtr0336841|FBtr0081142 19041121|19041121|19041121 19041473|19041541|19041541 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L + 19041176 19041212 3'utr mib2 FlyBase G4025.1 CAAACAGCAACCAAAGTGGCTTGTATATATACATACA 8 19041194 0.942204511 2 8 34 1 1 0 0.25 0.4 8 0 0 10 2L:19041176-19041212 7 8 414 FBgn0086442 1398.326667 43.78666667 67.22333333 0.005721124 0.182704019 0.119006297 -9 -9 -9 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 2L 19041244 19041249 + 2L_19041244_19041249_+ 1 0.999999999 1 0 mib2 FBtr0336840|FBtr0336841|FBtr0081142 19041121|19041121|19041121 19041473|19041541|19041541 2L + 19041211 19041257 3'utr mib2 FlyBase G5181.1 CACAAAACAAACACACACTCACATTGCCGTGTCATGTGCAAATCGAA 6 19041235 0.959420325 4 6 30 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 2L:19041211-19041257 6 mib2 FBtr0336840|FBtr0336841|FBtr0081142 19041121|19041121|19041121 19041473|19041541|19041541 ATGTGC 6mer3-8 dme-miR-305-3p 2L + 19041227 19041269 3'utr mib2 FlyBase G4026.1 ACTCACATTGCCGTGTCATGTGCAAATCGAAATTATTATTTAT 6 19041235 0.784715718 4 5 37 0.714285714 0.698970004 0.285714286 0.166666667 0.285714286 6 2 0 5 2L:19041227-19041269 6 4 415 FBgn0086442 1398.326667 43.78666667 67.22333333 0.002860562 0.09135201 0.059503149 9 9 9 0.01 dme-miR-305-3p 7mer-m1 TGTGCCG 2L 19043405 19043411 + 2L_19043405_19043411_+ 0.570458338 0.825582373 0.698020355 0.180399981 Catsup FBtr0081143 19043349 19043614 2L + 19043308 19043409 stop_codon Catsup FlyBase G5188.1 AACCGGCGTAGCCCTAATGATCGTTATCGCCAAGTTCGAGTAATATCAAAATTGTGGAAAGTTAACACAAAAAAGATCTAATTGCATGTACTGAAAGTGTGC 35 19043389 0.937414963 8 34 185 0.933333333 1.021189299 0.266666667 0.2 0.377777778 35 0 3 42 2L:19043308-19043409 5 Catsup FBtr0081143 19043349 19043614 TGTGCCG 7mer-m1 dme-miR-305-3p 2L + 19043348 19043413 stop_codon Catsup FlyBase G4033.1 TAATATCAAAATTGTGGAAAGTTAACACAAAAAAGATCTAATTGCATGTACTGAAAGTGTGCCGCA 21 19043390 0.965420938 9 21 113 1 1.579783597 0.210526316 0.571428571 0.763157895 21 0 0 38 2L:19043348-19043413 7 5.5 416 FBgn0002022 1764.906667 126.34 193.0266667 0.003116312 0.043533323 0.028493472 16 15 15.5 0.01 dme-miR-1006-3p 6mer3-8 CGAATT 2L 19057607 19057612 + 2L_19057607_19057612_+ 1 1 1 0 CG10492 FBtr0113043|FBtr0081148 19057519|19057519 19058410|19058821 2L + 19057544 19057642 3'utr CG10492 FlyBase G5229.1 TACATATATGGAAATATTATTACTGCTATATTAATGATTATGCATAATCCTTACCTACTTATACGAATTACCATTTATTATGATTGTGTAGTGCGGAAA 13 19057629 0.988927074 11 12 112 0.941176471 1.204119983 0.470588235 0.307692308 0.470588235 13 1 0 16 2L:19057544-19057642 6 CG10492 FBtr0081148|FBtr0113043 19057519|19057519 19058821|19058410 CGAATT 6mer3-8 dme-miR-1006-3p 2L + 19057608 19057643 3'utr CG10492 FlyBase G4062.1 GAATTACCATTTATTATGATTGTGTAGTGCGGAAAT 5 19057635 0.989300662 3 4 40 0.833333333 0.698970004 0 0.2 0.333333333 5 1 0 5 2L:19057608-19057643 4 3.5 417 FBgn0032748 504.75 13.92666667 21.35 0.006934126 0.251316419 0.163934426 -22 -28 -25 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 19058231 19058236 + 2L_19058231_19058236_+ 1 0.88299254 0.94149627 0.082736797 CG10492 FBtr0113043|FBtr0081148 19057519|19057519 19058410|19058821 2L + 19058177 19058270 3'utr CG10492 FlyBase G5233.1 GTGTAGCAGCACAGTGTGCATAGTTAACCGACTTCTGATTCCAACCGAGCCCTCTGATCTACTAACACCCTGTACTCTAGTTACTCCGCCATCT 20 19058215 0.966465711 8 19 98 0.958333333 1.361727836 0.166666667 0.15 0.291666667 20 1 0 23 2L:19058177-19058270 6 CG10492 FBtr0081148|FBtr0113043 19057519|19057519 19058821|19058410 TGATCT 6mer3-8 dme-bantam-3p 2L + 19058198 19058239 3'utr CG10492 FlyBase G4066.1 AGTTAACCGACTTCTGATTCCAACCGAGCCCTCTGATCTACT 15 19058215 0.724992974 4 14 77 0.944444444 0.929418926 0.222222222 0.2 0.333333333 15 0 1 17 2L:19058198-19058239 6 7 418 FBgn0032748 504.75 13.92666667 21.35 0.013868252 0.502632839 0.327868852 16 16 16 0.01 dme-miR-970-3p 7mer-m8 TCTTATG 2L 19058620 19058626 + 2L_19058620_19058626_+ 0.423880853 0.658999343 0.541440098 0.166253815 CG10492 FBtr0081148 19057519 19058821 2L + 19058569 19058634 3'utr CG10492 FlyBase G5236.1 CGCCAAAACCGCCCACGGTTGACCACAAAATACAATTGCCTGCCCTTAGTTTCTTATGTATAGACG 24 19058605 0.988329383 5 23 213 0.96 1.380211242 0.08 0.041666667 0.08 24 1 0 24 2L:19058569-19058634 7 CG10492 FBtr0081148 19057519 19058821 TCTTATG 7mer-m8 dme-miR-970-3p 2L + 19058588 19058628 3'utr CG10492 FlyBase G4069.1 TGACCACAAAATACAATTGCCTGCCCTTAGTTTCTTATGTA 13 19058605 0.822722443 4 13 90 1 1.301029996 0.3 0.461538462 0.65 13 0 0 20 2L:19058588-19058628 7 10.5 419 FBgn0032748 504.75 13.92666667 21.35 0.020802377 0.753949258 0.491803279 15 15 15 0.01 dme-miR-932-5p 6mer3-8 GGAATT 2L 19069445 19069450 + 2L_19069445_19069450_+ 1 1 1 0 CG17343 FBtr0081151 19065246 19069673 2L + 19069444 19069501 3'utr CG17343 FlyBase G5241.1 GGGAATTAACACTTTGATCGTCACTACCTCAATGGATGAAGCACTTAGTTTTTAAGAA 32 19069457 0.76503057 9 31 222 0.974358974 1.579783597 0.076923077 0.15625 0.307692308 32 1 0 38 2L:19069444-19069501 6 CG17343 FBtr0081151 19065246 19069673 GGAATT 6mer3-8 dme-miR-932-5p 2L + 19069444 19069485 3'utr CG17343 FlyBase G4074.1 GGGAATTAACACTTTGATCGTCACTACCTCAATGGATGAAGC 22 19069457 0.684272063 7 20 153 0.838709677 1.414973348 0.032258065 0.272727273 0.483870968 22 5 0 26 2L:19069444-19069485 6 14 420 FBgn0032751 35 7.813333333 11.57333333 0.4 1.791808874 1.209677419 -12 -12 -12 0.01 dme-miR-932-5p 7mer-A1 GAATTGA 2L 19069567 19069573 + 2L_19069567_19069573_+ 0.823349562 0.823349562 0.823349562 0 CG17343 FBtr0081151 19065246 19069673 2L + 19069535 19069593 3'utr CG17343 FlyBase G5242.1 TTGTGCTTTTTCGCGCACTGCAAGCGAAATTAGAATTGATCGTCGTAGTTCACTAATAT 37 19069570 0.7690261 7 33 303 0.886363636 1.290034611 0.068181818 0.162162162 0.295454545 37 4 1 39 2L:19069535-19069593 7 CG17343 FBtr0081151 19065246 19069673 GAATTGA 7mer-A1 dme-miR-932-5p 2L + 19069534 19069597 3'utr CG17343 FlyBase G4075.1 CTTGTGCTTTTTCGCGCACTGCAAGCGAAATTAGAATTGATCGTCGTAGTTCACTAATATATTT 30 19069570 0.730505974 7 29 235 0.96969697 1.505149978 0.060606061 0.1 0.181818182 30 1 0 32 2L:19069534-19069597 7 29.5 421 FBgn0032751 35 7.813333333 11.57333333 0.842857143 3.77559727 2.548963134 -3 -3 -3 0.01 dme-miR-14-3p 6mer2-7 AGACTG 2L 19069642 19069647 + 2L_19069642_19069647_+ 1 1 1 0 CG17343 FBtr0081151 19065246 19069673 2L + 19069615 19069663 3'utr CG17343 FlyBase G5243.1 ACCTCAATTAGTTGGTGCCAAACAGCCAGACTGTTAAATATAAGAATTC 84 19069648 0.668437311 4 82 375 0.970588235 1.995635195 0.029411765 0.19047619 0.333333333 84 3 0 99 2L:19069615-19069663 6 CG17343 FBtr0081151 19065246 19069673 AGACTG 6mer2-7 dme-miR-14-3p 2L + 19069620 19069665 3'utr CG17343 FlyBase G4076.1 AATTAGTTGGTGCCAAACAGCCAGACTGTTAAATATAAGAATTCTA 60 19069648 0.66357283 5 60 263 1 1.924279286 0.071428571 0.316666667 0.511904762 60 0 0 84 2L:19069620-19069665 6 71.5 422 FBgn0032751 35 7.813333333 11.57333333 2.042857143 9.151023891 6.177995392 -6 -6 -6 0.01 dme-miR-1002-5p 6mer3-8 CTACTT 2L 19171327 19171332 + 2L_19171327_19171332_+ 0.999222427 0.999155671 0.999189049 4.72E-05 brat FBtr0081158|FBtr0081159|FBtr0344846|FBtr0081160 19171258|19171258|19171258|19171258 19171852|19172567|19172567|19179758 2L + 19171255 19171544 stop_codon brat FlyBase G5274.1 TGTAAACACACAGACACACACACTCCATGGATGTGAGTCCGGAAAGGAGGAGGATCTGTGGTCCGGCACTCACTACTTCTATAGGCTAAGTTCTCAATAGTCTGACTTGCTCGGTCTCTCCAGCTCTAATTCTAAATCTACACAATCGAAGTTGAAATCGAAATCTATAAGATCCCTACTATCTCCCCCGATCTGTCATCTCTCATAGCCTTAGACTTTGCTCGCTATGTAATAACACACACGCACACTGTTGGAATGATTTTTATTATCTTTTAAATTATTGTTGAATT 377 19171352 0.986517778 48 347 2969 0.920993228 1.531478917 0.198645598 0.148541114 0.275395034 377 24 11 408 2L:19171255-19171544 6 brat FBtr0081159|FBtr0344846|FBtr0081160|FBtr0081158 19171258|19171258|19171258|19171258 19172567|19172567|19179758|19171852 CTACTT 6mer3-8 dme-miR-1002-5p 2L + 19171269 19171532 5'utr brat FlyBase G4101.1 CACACACACTCCATGGATGTGAGTCCGGAAAGGAGGAGGATCTGTGGTCCGGCACTCACTACTTCTATAGGCTAAGTTCTCAATAGTCTGACTTGCTCGGTCTCTCCAGCTCTAATTCTAAATCTACACAATCGAAGTTGAAATCGAAATCTATAAGATCCCTACTATCTCCCCCGATCTGTCATCTCTCATAGCCTTAGACTTTGCTCGCTATGTAATAACACACACGCACACTGTTGGAATGATTTTTATTATCTTTTAAAT 283 19171352 0.813500909 44 261 2208 0.907621247 1.480449198 0.302540416 0.378091873 0.593533487 283 28 12 393 2L:19171269-19171532 6 33.5 423 FBgn0010300 4742.333333 86.64666667 133.0666667 0.007064033 0.386627683 0.251753507 -25 -25 -25 0.01 dme-miR-252-5p 6mer3-8 GTACTT 2L 19171600 19171605 + 2L_19171600_19171605_+ 1 1 1 0 brat FBtr0081158|FBtr0081159|FBtr0344846|FBtr0081160 19171258|19171258|19171258|19171258 19171852|19172567|19172567|19179758 2L + 19171567 19171724 5'utr brat FlyBase G5275.1 ATTTACACTGTTAAGCTTAGTTTTTATTTGTGCGTACTTGTTTATGATAAATATATATTATGTGTATTCATGTTCATGTTCAAATCGGATAGTGCCGCCGCCTCTCTATATCTTTGCACACTTCTCACTTCAAACCCTCGTATCTCTATCTCGCGTGC 75 19171605 0.846700112 27 64 715 0.833333333 1.176091259 0.155555556 0.186666667 0.322222222 75 11 4 75 2L:19171567-19171724 6 brat FBtr0081159|FBtr0344846|FBtr0081160|FBtr0081158 19171258|19171258|19171258|19171258 19172567|19172567|19179758|19171852 GTACTT 6mer3-8 dme-miR-252-5p 2L + 19171568 19171717 5'utr brat FlyBase G4102.1 TTTACACTGTTAAGCTTAGTTTTTATTTGTGCGTACTTGTTTATGATAAATATATATTATGTGTATTCATGTTCATGTTCAAATCGGATAGTGCCGCCGCCTCTCTATATCTTTGCACACTTCTCACTTCAAACCCTCGTATCTCTATCT 50 19171604 0.817523602 25 45 461 0.911764706 1.792391689 0.117647059 0.285714286 0.485294118 49 6 0 62 2L:19171568-19171717 6 18 424 FBgn0010300 4742.333333 86.64666667 133.0666667 0.0037956 0.207740248 0.135270541 -5 -4 -4.5 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 2L 19171852 19171857 + 2L_19171852_19171857_+ 1 1 1 0 brat FBtr0081159|FBtr0344846|FBtr0081160 19171258|19171258|19171258 19172567|19172567|19179758 2L + 19171764 19171874 5'utr brat FlyBase G5276.1 AAACAAAAAAAATGACACTTTTTAACTATATATAGTAGATACCAGAAGAAATCCCTCCACTTTTTTTATGTTCGTTGCCGACTGCAAGGAAAAAAAAGGAAAAAAATTATG 93 19171825 0.979053321 20 81 549 0.875 1.322219295 0.075 0.204301075 0.383333333 93 11 4 105 2L:19171764-19171874 6 brat FBtr0081159|FBtr0344846|FBtr0081160 19171258|19171258|19171258 19172567|19172567|19179758 GAAAAA 6mer3-8 dme-miR-980-5p 2L + 19171764 19171858 5'utr brat FlyBase G4103.1 AAACAAAAAAAATGACACTTTTTAACTATATATAGTAGATACCAGAAGAAATCCCTCCACTTTTTTTATGTTCGTTGCCGACTGCAAGGAAAAAA 54 19171824 0.966512562 14 45 342 0.844155844 1.812913357 0.103896104 0.37037037 0.558441558 54 12 0 65 2L:19171764-19171858 6 8.5 425 FBgn0010300 4742.333333 86.64666667 133.0666667 0.001792367 0.098099561 0.063877756 27 28 27.5 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT 2L 19172049 19172054 + 2L_19172049_19172054_+ 1 1 1 0 brat FBtr0081159|FBtr0344846|FBtr0081160 19171258|19171258|19171258 19172567|19172567|19179758 2L + 19171911 19172183 5'utr brat FlyBase G5277.1 AACCGCCAACAAAATGGAGCCGCGTATCGAGCATTAATTAATTAATAATTGATTGTAATTTTTAGATATATGATTGCGCAAATTGTTTGTTATTATTATTTTTGATTGCATAAACATTTGATACATTATATATTATATAGCTGTTTTTTACGTTTATAAATTATTTTTGATTATACCACTTATTGATTACTGATTATTTATATTTATATACATTAATTAATTATCCTCTAAGACATGTTTGCTACTTTTATACGAAATCAACCGAACCCAAAA 121 19172058 0.999927854 45 112 1283 0.917808219 1.649983544 0.095890411 0.173553719 0.315068493 121 10 2 134 2L:19171911-19172183 6 brat FBtr0081159|FBtr0344846|FBtr0081160 19171258|19171258|19171258 19172567|19172567|19179758 AGCTGT 6mer3-8 dme-miR-1008-3p 2L + 19172008 19172183 5'utr brat FlyBase G4105.1 ATTTTTGATTGCATAAACATTTGATACATTATATATTATATAGCTGTTTTTTACGTTTATAAATTATTTTTGATTATACCACTTATTGATTACTGATTATTTATATTTATATACATTAATTAATTATCCTCTAAGACATGTTTGCTACTTTTATACGAAATCAACCGAACCCAAAA 60 19172058 0.994298124 19 50 689 0.83908046 1.562292864 0.08045977 0.333333333 0.540229885 60 13 1 73 2L:19172008-19172183 6 34 426 FBgn0010300 4742.333333 86.64666667 133.0666667 0.007169467 0.392398246 0.255511022 -9 -9 -9 0.01 dme-miR-980-5p 7mer-A1 AAAAACA 2L 19172355 19172361 + 2L_19172355_19172361_+ 0.782911824 0.782911824 0.782911824 0 brat FBtr0081159|FBtr0344846|FBtr0081160 19171258|19171258|19171258 19172567|19172567|19179758 2L + 19172212 19172393 5'utr brat FlyBase G5278.1 AATTTTTATACTCGCTTAGAATTTATGTTTTCCATTGTTTTATTGTAACCACGACAGCGGAAAGAAAAGATGGAATTACCTACCTACACCGTAATAATAATGCAGACAAAAACCCACTGGCGATTCTTTAATTTAATTTAAACAAAAACAACTGAACGCACTGAGAATAGTTGAAATTTTTG 49 19172364 0.965859315 16 40 231 0.857142857 1.380211242 0.071428571 0.12244898 0.232142857 49 7 1 48 2L:19172212-19172393 7 brat FBtr0081159|FBtr0344846|FBtr0081160 19171258|19171258|19171258 19172567|19172567|19179758 AAAAACA 7mer-A1 dme-miR-980-5p 2L + 19172347 19172385 5'utr brat FlyBase G4107.1 ATTTAAACAAAAACAACTGAACGCACTGAGAATAGTTGA 12 19172364 0.872197664 2 12 32 1 1.278753601 0.315789474 0.5 0.684210526 12 0 0 19 2L:19172347-19172385 7 14 427 FBgn0010300 4742.333333 86.64666667 133.0666667 0.002952133 0.161575748 0.105210421 -9 -9 -9 0.01 dme-miR-8-3p 6mer2-7 AGTATT 2L 19172669 19172674 + 2L_19172669_19172674_+ 0.999999998 0.999999998 0.999999998 0 brat FBtr0081160 19171258 19179758 2L + 19172635 19172683 3'utr brat FlyBase G5280.1 GTATCTTGAGGATGTGTGTGCATAGATCTAATTGAGTATTTAAAAGTAA 12 19172666 0.798441665 7 12 98 1 1.255272505 0.111111111 0.25 0.5 12 0 0 18 2L:19172635-19172683 6 brat FBtr0081160 19171258 19179758 AGTATT 6mer2-7 dme-miR-8-3p 2L + 19172630 19172684 3'utr brat FlyBase G4109.1 TCAAAGTATCTTGAGGATGTGTGTGCATAGATCTAATTGAGTATTTAAAAGTAAC 12 19172652 0.670140593 6 12 100 1 1.397940009 0.36 0.666666667 0.84 12 0 0 25 2L:19172630-19172684 6 4.5 428 FBgn0010300 4742.333333 86.64666667 133.0666667 0.0009489 0.051935062 0.033817635 3 17 10 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2L 19172714 19172719 + 2L_19172714_19172719_+ 0.999999998 0.999999998 0.999999998 0 brat FBtr0081160 19171258 19179758 2L + 19172688 19172735 3'utr brat FlyBase G5281.1 TAACTAAAAGTTGGCAATCAGCGCAGAAGACTTGAAACATTTATAACT 56 19172705 0.896557466 5 47 194 0.885245902 1.431363764 0.049180328 0.089285714 0.163934426 56 6 1 54 2L:19172688-19172735 6 brat FBtr0081160 19171258 19179758 AAGACT 6mer3-8 dme-miR-14-3p 2L + 19172693 19172746 3'utr brat FlyBase G4110.1 AAAAGTTGGCAATCAGCGCAGAAGACTTGAAACATTTATAACTATTATAATTAT 47 19172705 0.929431339 6 43 158 0.917808219 1.348953548 0.04109589 0.404255319 0.616438356 47 4 2 67 2L:19172693-19172746 6 49.5 429 FBgn0010300 4742.333333 86.64666667 133.0666667 0.0104379 0.571285681 0.371993988 9 9 9 0.01 dme-miR-970-3p 6mer2-7 CTTATG 2L 19172881 19172886 + 2L_19172881_19172886_+ 0.999999998 0.999999998 0.999999998 0 brat FBtr0081160 19171258 19179758 2L + 19172884 19172942 3'utr brat FlyBase G5283.1 ATGTTTACTTCCTTGACAGAAATAGGGACTAAATACGAAAGCCACACGGTGGGCAACAA 16 19172896 0.961923938 5 14 71 0.952380952 1.301029996 0.047619048 0.25 0.428571429 16 1 0 20 2L:19172884-19172942 2 brat FBtr0081160 19171258 19179758 CTTATG 6mer2-7 dme-miR-970-3p 2L + 19172878 19172953 3'utr brat FlyBase G4112.1 CCACTTATGTTTACTTCCTTGACAGAAATAGGGACTAAATACGAAAGCCACACGGTGGGCAACAATCAGGATATGG 12 19172906 0.946180698 6 11 53 0.947368421 1.255272505 0.210526316 0.333333333 0.578947368 12 1 0 18 2L:19172878-19172953 6 3 430 FBgn0010300 4742.333333 86.64666667 133.0666667 0.0006326 0.034623375 0.02254509 -15 -25 -20 0.01 dme-miR-92b-3p 6mer2-7 TGCAAT 2L 19173019 19173024 + 2L_19173019_19173024_+ 0.999999998 0.999999998 0.999999998 0 brat FBtr0081160 19171258 19179758 2L + 19172967 19173041 3'utr brat FlyBase G5284.1 CGTCACATATCCTCTTGATCTGTTGCGCACCGTGTGCACATGGACTTCTAATTGCAATGATTTAGTTAAAGCATT 813 19173007 0.926654495 11 804 6655 0.990131579 2.95568775 0.060307018 0.108241082 0.20504386 813 9 0 903 2L:19172967-19173041 6 brat FBtr0081160 19171258 19179758 TGCAAT 6mer2-7 dme-miR-92b-3p 2L + 19172971 19173038 3'utr brat FlyBase G4113.1 ACATATCCTCTTGATCTGTTGCGCACCGTGTGCACATGGACTTCTAATTGCAATGATTTAGTTAAAGC 458 19173007 0.921903916 9 447 3718 0.973426573 2.365487985 0.071328671 0.403930131 0.618181818 458 17 2 696 2L:19172971-19173038 6 108 431 FBgn0010300 4742.333333 86.64666667 133.0666667 0.022773599 1.246441486 0.811623246 12 12 12 0.01 dme-miR-980-5p 6mer2-7 AAAAAC 2L 19173437 19173442 + 2L_19173437_19173442_+ 0.996637079 0.999996696 0.998316887 0.002375596 brat FBtr0081160 19171258 19179758 2L + 19173391 19173485 3'utr brat FlyBase G5287.1 GTTTCCCCCCTTCCTCATCCTCTTTATATTCCCTTGTTTGTTTTGAAAAAACGCCTTGCTCTGTGTAATTTCTGATTTGCTTGACCTATTATTTT 31 19173450 0.910840651 17 31 304 1 1.612783857 0.146341463 0.258064516 0.43902439 31 0 0 41 2L:19173391-19173485 6 brat FBtr0081160 19171258 19179758 AAAAAC 6mer2-7 dme-miR-980-5p 2L + 19173414 19173490 3'utr brat FlyBase G4116.1 TTATATTCCCTTGTTTGTTTTGAAAAAACGCCTTGCTCTGTGTAATTTCTGATTTGCTTGACCTATTATTTTAATTA 21 19173447 0.98803532 11 20 180 0.896551724 1.414973348 0.137931034 0.285714286 0.482758621 21 3 0 26 2L:19173414-19173490 6 14.5 432 FBgn0010300 4742.333333 86.64666667 133.0666667 0.003057567 0.167346311 0.108967936 -13 -10 -11.5 0.01 dme-miR-304-5p 8mer-A1 TGAGATTA 2L 19173529 19173536 + 2L_19173529_19173536_+ 0.625363358 0.523139895 0.574251626 0.07228293 brat FBtr0081160 19171258 19179758 2L + 19173494 19173548 3'utr brat FlyBase G5288.1 GATAATTACCTATGTTTTGTGTGTATCTACTTAAGTGAGATTATTAAATATACGA 23 19173528 0.969755715 8 21 212 0.923076923 1.380211242 0.038461538 0.086956522 0.192307692 23 2 0 24 2L:19173494-19173548 8 brat FBtr0081160 19171258 19179758 TGAGATTA 8mer-A1 dme-miR-304-5p 2L + 19173507 19173549 3'utr brat FlyBase G4117.1 GTTTTGTGTGTATCTACTTAAGTGAGATTATTAAATATACGAA 22 19173528 0.748183524 6 18 181 0.848484848 1.447158031 0.03030303 0.363636364 0.575757576 22 5 0 28 2L:19173507-19173549 8 20.5 433 FBgn0010300 4742.333333 86.64666667 133.0666667 0.004322767 0.23659306 0.154058116 1 1 1 0.01 dme-miR-2b-2-5p 7mer-m8 TTGAAGA 2L 19173609 19173615 + 2L_19173609_19173615_+ 0.631525998 0.631525854 0.631525926 7.07E-08 brat FBtr0081160 19171258 19179758 2L + 19173562 19173707 3'utr brat FlyBase G5289.1 AGTTCTTTCTTGTTGTAATCTTAATTGACTTTAATCGACCTATTGTATTGAAGATTAATGTATCGATGTAATGGTAGCTGTAATAACGACAAAGGGTTTAAACAAAGTATTGTACGTTTTCTGTGTGAGAAACACTTTTTACTTGA 85 19173633 0.985533348 20 80 657 0.932692308 1.986771734 0.298076923 0.211764706 0.355769231 85 7 0 97 2L:19173562-19173707 7 brat FBtr0081160 19171258 19179758 TTGAAGA 7mer-m8 dme-miR-2b-2-5p 2L + 19173580 19173676 3'utr brat FlyBase G4118.1 TCTTAATTGACTTTAATCGACCTATTGTATTGAAGATTAATGTATCGATGTAATGGTAGCTGTAATAACGACAAAGGGTTTAAACAAAGTATTGTAC 63 19173633 0.828407953 13 61 484 0.952380952 1.903089987 0.273809524 0.253968254 0.44047619 63 4 0 80 2L:19173580-19173676 7 35 434 FBgn0010300 4742.333333 86.64666667 133.0666667 0.007380333 0.403939371 0.263026052 -24 -24 -24 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA 2L 19174103 19174108 + 2L_19174103_19174108_+ 0.999999998 0.999999998 0.999999998 0 brat FBtr0081160 19171258 19179758 2L + 19174077 19174115 3'utr brat FlyBase G5292.1 AGACAGCAAATGTACATCTGTGCTCTGTGCAAAAATGTT 5 19174087 0.979101796 2 5 33 1 0.698970004 0 0 0 5 0 0 5 2L:19174077-19174115 6 brat FBtr0081160 19171258 19179758 GTGCAA 6mer3-8 dme-miR-92b-3p 2L + 19174077 19174107 3'utr brat FlyBase G4120.1 AGACAGCAAATGTACATCTGTGCTCTGTGCA 5 19174087 0.943714495 3 5 31 1 1.041392685 0.181818182 0.6 0.818181818 5 0 0 11 2L:19174077-19174107 5 4 435 FBgn0010300 4742.333333 86.64666667 133.0666667 0.000843467 0.046164499 0.03006012 16 16 16 0.01 dme-miR-14-3p 6mer2-7 AGACTG 2L 19174483 19174488 + 2L_19174483_19174488_+ 0.999999977 0.998645862 0.99932292 0.000957493 brat FBtr0081160 19171258 19179758 2L + 19174464 19174502 3'utr brat FlyBase G5294.1 GATGAATTGAGAATCTAATAGACTGTGCAACCACAAAAA 46 19174482 0.891133762 5 44 235 0.96 1.380211242 0 0.086956522 0.16 46 1 1 48 2L:19174464-19174502 6 brat FBtr0081160 19171258 19179758 AGACTG 6mer2-7 dme-miR-14-3p 2L + 19174459 19174503 3'utr brat FlyBase G4122.1 AAATTGATGAATTGAGAATCTAATAGACTGTGCAACCACAAAAAT 40 19174489 0.960105864 5 35 205 0.876923077 1.056904851 0 0.45 0.661538462 40 4 4 57 2L:19174459-19174503 6 42.5 436 FBgn0010300 4742.333333 86.64666667 133.0666667 0.008961833 0.490497807 0.319388778 1 -6 -2.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 19177915 19177922 + 2L_19177915_19177922_+ 0.63113665 0.63113665 0.63113665 0 brat FBtr0336627|FBtr0081160 19177522|19171258 19179758|19179758 2L + 19177881 19177935 3'utr brat FlyBase G5295.1 ATATAGTGCAACTAAGCCGATCATGGTATCATCATCTAGTCATCATGCATACATA 17 19177912 0.980899443 7 17 122 1 1.380211242 0.041666667 0.352941176 0.541666667 17 0 0 24 2L:19177881-19177935 8 brat FBtr0336627|FBtr0081160 19177522|19171258 19179758|19179758 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L + 19177876 19177930 3'utr brat FlyBase G4123.1 ACGCTATATAGTGCAACTAAGCCGATCATGGTATCATCATCTAGTCATCATGCAT 8 19177915 0.981039364 3 8 58 1 1.176091259 0 0.625 0.8 8 0 0 15 2L:19177876-19177930 8 11.5 437 FBgn0010300 4742.333333 86.64666667 133.0666667 0.002424967 0.132722936 0.086422846 3 0 1.5 0.01 dme-miR-92b-3p 7mer-m8 GTGCAAT 2L 19179882 19179888 - 2L_19179882_19179888_- 0.657411152 0.659000076 0.658205614 0.001123522 CG17568 FBtr0081233 19179747 19179946 2L - 19179873 19179901 3'utr CG17568 FlyBase G11636.1 ATCAGATAGGAATGTGCAATCTCAAATTT 13 19179888 0.799746802 2 11 70 0.933333333 0.84509804 0.133333333 0.153846154 0.266666667 13 0 1 14 2L:19179873-19179901 7 CG17568 FBtr0081233 19179747 19179946 GTGCAAT 7mer-m8 dme-miR-92b-3p 2L - 19179872 19179905 3'utr CG17568 FlyBase G8935.1 TGGCATCAGATAGGAATGTGCAATCTCAAATTTT 8 19179888 0.79263559 3 7 44 1 1.113943352 0.076923077 0.375 0.615384615 8 0 0 13 2L:19179872-19179905 7 9.5 438 FBgn0032763 137.99 9.22 14.17666667 0.068845569 1.030368764 0.670115213 0 0 0 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2L 19189662 19189668 + 2L_19189662_19189668_+ 0.823349562 0.823349562 0.823349562 0 pigeon FBtr0302561|FBtr0081194 19189305|19189584 19189938|19189938 2L + 19189596 19189861 3'utr pigeon FlyBase G5309.1 AAGAGTAACTAATGAAGTATTGTGTCAAATTATCAAGTACTTAGCCAAGGCCAGTTTGCAAATATTCCAAAGATTTGATTTGTCAAATGTATTAGTTAAGATTCTTCTCGTGCAGCTTTGATTTTTGTTAGGGTTCTTCTGTGTGCTTTTAGTATTAATTTTCTGTTCCTATTATTTGTGTAACGACTGATACACATTCCAAGTCTGTAATTATAAATTATTTATGTTGTTAATTGATGTACCTAAAATCATGTACGTATTTATAT 326 19189660 0.837831772 58 307 3172 0.950904393 1.611605309 0.124031008 0.165644172 0.297157623 326 11 8 368 2L:19189596-19189861 7 pigeon FBtr0302561|FBtr0081194 19189305|19189584 19189938|19189938 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2L + 19189639 19189675 3'utr pigeon FlyBase G4130.2 GCCAAGGCCAGTTTGCAAATATTCCAAAGATTTGATT 44 19189660 0.847628176 4 43 299 1 1.812913357 0.338461538 0.325581395 0.553846154 43 0 0 65 2L:19189639-19189675 7 73.5 439 FBgn0010309 154.9266667 5.81 8.776666667 0.474418004 12.65060241 8.374477782 2 2 2 0.01 dme-miR-283-5p 6mer3-8 TGATAT 2L 19338722 19338727 - 2L_19338722_19338727_- 1 1 1 0 dnt FBtr0336820|FBtr0081224 19338667|19338676 19339164|19339164 2L - 19338708 19338756 3'utr dnt FlyBase G11640.1 AATTTACCGTTTATACGAGAGATCAAACATGATATACAAATATATACAC 30 19338734 0.971582474 4 29 191 0.96875 1.491361694 0.1875 0.066666667 0.125 30 1 0 31 2L:19338708-19338756 6 dnt FBtr0336820|FBtr0081224 19338667|19338676 19339164|19339164 TGATAT 6mer3-8 dme-miR-283-5p 2L - 19338712 19338749 3'utr dnt FlyBase G8940.1 CGTTTATACGAGAGATCAAACATGATATACAAATATAT 15 19338734 0.949903851 3 15 73 1 1.342422681 0.136363636 0.4 0.590909091 15 0 0 22 2L:19338712-19338749 6 22 440 FBgn0024245 411 18.84333333 28.87333333 0.053527981 1.16752167 0.761948742 7 7 7 0.01 dme-miR-283-5p 8mer-m1 TGATATTT 2L 19338842 19338849 - 2L_19338842_19338849_- 0.555593841 0.555593841 0.555593841 0 dnt FBtr0336820|FBtr0081224 19338667|19338676 19339164|19339164 2L - 19338827 19338881 3'utr dnt FlyBase G11641.1 CTAGCTAAAACAAAGGCCGAAATCAAATATAGTGATATTTATAAATAGAGATAGC 26 19338853 0.824696096 8 22 194 0.866666667 1.414973348 0.133333333 0.153846154 0.266666667 26 4 0 26 2L:19338827-19338881 8 dnt FBtr0336820|FBtr0081224 19338667|19338676 19339164|19339164 TGATATTT 8mer-m1 dme-miR-283-5p 2L - 19338831 19338869 3'utr dnt FlyBase G8941.1 AAGGCCGAAATCAAATATAGTGATATTTATAAATAGAGA 11 19338853 0.850910768 3 9 80 0.882352941 0.698970004 0.235294118 0.454545455 0.647058824 11 0 2 15 2L:19338831-19338869 8 16.5 441 FBgn0024245 411 18.84333333 28.87333333 0.040145985 0.875641252 0.571461556 4 4 4 0.01 dme-miR-318-3p 8mer-A1 CCCAGTGA 2L 19390517 19390524 - 2L_19390517_19390524_- 0.678004647 0.678004647 0.678004647 0 CG17544 FBtr0081216|FBtr0300822|FBtr0081218|FBtr0081217 19390368|19390368|19390368|19390368 19390668|19390668|19390668|19390668 2L - 19390510 19390542 3'utr CG17544 FlyBase G11650.1 ATGGCCAACTACATTGATCCCAGTGAAAGGTTT 12 19390529 0.694743677 2 12 61 1 1.113943352 0.153846154 0.083333333 0.153846154 12 0 0 13 2L:19390510-19390542 8 CG17544 FBtr0081217|FBtr0081218|FBtr0300822|FBtr0081216 19390368|19390368|19390368|19390368 19390668|19390668|19390668|19390668 CCCAGTGA 8mer-A1 dme-miR-318-3p 2L - 19390507 19390541 3'utr CG17544 FlyBase G8947.1 TGGCCAACTACATTGATCCCAGTGAAAGGTTTTTT 8 19390528 0.679659964 2 7 48 0.9 0.653212514 0 0.125 0.3 8 0 1 9 2L:19390507-19390541 8 10 442 FBgn0032775 1454.426667 69.89666667 107.4566667 0.006875562 0.143068339 0.093060769 5 4 4.5 0.01 dme-miR-31a-5p 8mer-A1 TCTTGCCA 2L 19429101 19429108 + 2L_19429101_19429108_+ 0.631136385 0.631136385 0.631136385 0 CG16771 FBtr0334164|FBtr0302874|FBtr0302938|FBtr0334165|FBtr0081204 19429037|19429037|19429037|19429037|19429037 19429224|19429224|19429224|19429224|19429224 2L + 19429057 19429161 3'utr CG16771 FlyBase G5315.1 AGCCAACAAAACACTTTGATATATGTAGTTATAATGAAAACTGTTCTTGCCAAGCTTACAAATTAGATATAAGTCAAAGATTGGGTCACCGAAATAGGACATGAG 42 19429100 0.974806979 13 40 272 0.97826087 1.653212514 0.260869565 0.095238095 0.173913043 42 1 0 45 2L:19429057-19429161 8 CG16771 FBtr0334165|FBtr0302938|FBtr0302874|FBtr0334164|FBtr0081204 19429037|19429037|19429037|19429037|19429037 19429224|19429224|19429224|19429224|19429224 TCTTGCCA 8mer-A1 dme-miR-31a-5p 2L + 19429056 19429114 3'utr CG16771 FlyBase G4133.1 TAGCCAACAAAACACTTTGATATATGTAGTTATAATGAAAACTGTTCTTGCCAAGCTTA 25 19429100 0.98478031 3 19 169 0.794117647 0.73239376 0.235294118 0.28 0.470588235 25 3 4 27 2L:19429056-19429114 8 23 443 FBgn0032779 937.25 47.39333333 72.85666667 0.024539877 0.485300324 0.315688338 1 1 1 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 2L 1943248 1943253 + 2L_1943248_1943253_+ 1 1 1 0 CG7337 FBtr0309828|FBtr0333006|FBtr0110882|FBtr0113011|FBtr0113012|FBtr0077811|FBtr0110883|FBtr0333007 1942964|1942964|1942964|1942964|1942964|1942964|1942964|1942964 1943818|1943818|1943939|1944289|1943461|1943818|1943947|1943461 2L + 1943220 1943357 3'utr CG7337 FlyBase G1109.1 AATAATTTATATGTCAACCGATTGCGTTTAGCTTGAATTAAATTCTGTAAATGTTAAGTTTAATAAGCTTAATAGATTTATGTACGTGTTAAGTGTTATTTGAGTTTAAGGCGGAATGATACGGAATGACCGGACCGG 113 1943241 0.986544894 11 113 960 1 2.120573931 0.234848485 0.159292035 0.28030303 113 0 0 132 2L:1943220-1943357 6 CG7337 FBtr0110883|FBtr0333007|FBtr0113012|FBtr0077811|FBtr0110882|FBtr0113011|FBtr0309828|FBtr0333006 1942964|1942964|1942964|1942964|1942964|1942964|1942964|1942964 1943947|1943461|1943461|1943818|1943939|1944289|1943818|1943818 TAGCTT 6mer3-8 dme-miR-79-3p 2L + 1943219 1943302 3'utr CG7337 FlyBase G877.1 CAATAATTTATATGTCAACCGATTGCGTTTAGCTTGAATTAAATTCTGTAAATGTTAAGTTTAATAAGCTTAATAGATTTATGT 62 1943241 0.844787228 6 62 532 1 2.025305865 0.216981132 0.5 0.70754717 62 0 0 106 2L:1943219-1943302 6 75.5 444 FBgn0031374 1209.94 21.90666667 33.73666667 0.062399788 3.44643944 2.237921154 7 7 7 0.01 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 19435335 19435342 + 2L_19435335_19435342_+ 0.625364919 0.625364919 0.625364919 0 Rab9 FBtr0081206 19435305 19435841 2L + 19435278 19435396 stop_codon Rab9 FlyBase G5327.1 AGGCGCCAGCCACCAATTATCGGCTATGAGCAGACAGACAGGAGCTGTCAGGAAACTTACGCTTAATTTAACCACTCACCCCGCCGGGTTGACCTTCAGATTCAATGCATTCCAGTCCG 230 19435334 0.980366963 11 226 1628 0.985185185 1.947760382 0.022222222 0.12173913 0.251851852 230 2 2 266 2L:19435278-19435396 8 Rab9 FBtr0081206 19435305 19435841 TACGCTTA 8mer-A1 dme-miR-965-3p 2L + 19435284 19435408 stop_codon Rab9 FlyBase G4142.1 CAGCCACCAATTATCGGCTATGAGCAGACAGACAGGAGCTGTCAGGAAACTTACGCTTAATTTAACCACTCACCCCGCCGGGTTGACCTTCAGATTCAATGCATTCCAGTCCGCGGAGGGGCAGG 104 19435334 0.979911182 11 100 697 0.966216216 2.155336037 0.060810811 0.307692308 0.513513514 104 5 0 143 2L:19435284-19435408 8 158.5 445 FBgn0032782 68.33333333 5.243333333 8.043333333 2.319512195 30.22886205 19.70576046 1 1 1 0.01 dme-miR-283-5p 7mer-m8 TGATATT 2L 19435480 19435486 + 2L_19435480_19435486_+ 0.421230102 0.594364338 0.50779722 0.122424367 Rab9 FBtr0081206 19435305 19435841 2L + 19435422 19435515 3'utr Rab9 FlyBase G5328.1 AAGGCAACCCATCCACCCAATGTTGATGGCTGTAGAGAGTGGATTGCCTCGTTGTGGTTGATATTCTAAGGGAACTATGCTTCACAGCGAGCTA 28 19435450 0.955997867 9 26 211 0.939393939 1.491361694 0.333333333 0.142857143 0.272727273 28 2 0 31 2L:19435422-19435515 7 Rab9 FBtr0081206 19435305 19435841 TGATATT 7mer-m8 dme-miR-283-5p 2L + 19435436 19435561 3'utr Rab9 FlyBase G4143.1 ACCCAATGTTGATGGCTGTAGAGAGTGGATTGCCTCGTTGTGGTTGATATTCTAAGGGAACTATGCTTCACAGCGAGCTAACTATGAGCTAGCTTCTATGTCAAGAATAGGATCTCCATTTTTACT 33 19435450 0.777402925 11 30 217 0.886792453 1.672097858 0.264150943 0.393939394 0.622641509 33 6 0 47 2L:19435436-19435561 7 8.5 446 FBgn0032782 68.33333333 5.243333333 8.043333333 0.124390244 1.621106167 1.056775798 30 30 30 0.01 dme-bantam-3p 6mer2-7 GATCTC 2L 19435546 19435551 + 2L_19435546_19435551_+ 1 1 1 0 Rab9 FBtr0081206 19435305 19435841 2L + 19435521 19435580 3'utr Rab9 FlyBase G5329.1 GAGCTAGCTTCTATGTCAAGAATAGGATCTCCATTTTTACTTGCTATGCTTTAATATTAT 26 19435555 0.692278769 9 24 201 0.894736842 1.531478917 0.078947368 0.346153846 0.552631579 26 4 0 34 2L:19435521-19435580 6 Rab9 FBtr0081206 19435305 19435841 GATCTC 6mer2-7 dme-bantam-3p 2L + 19435436 19435561 3'utr Rab9 FlyBase G4143.1 ACCCAATGTTGATGGCTGTAGAGAGTGGATTGCCTCGTTGTGGTTGATATTCTAAGGGAACTATGCTTCACAGCGAGCTAACTATGAGCTAGCTTCTATGTCAAGAATAGGATCTCCATTTTTACT 33 19435554 0.777402925 11 30 217 0.886792453 1.672097858 0.264150943 0.393939394 0.622641509 33 6 0 47 2L:19435436-19435561 6 16 447 FBgn0032782 68.33333333 5.243333333 8.043333333 0.234146341 3.051493961 1.989225031 -9 -8 -8.5 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 19443179 19443186 - 2L_19443179_19443186_- 0.495592321 0.500120305 0.497856313 0.00320178 Hs2st FBtr0081288 19442831 19443303 2L - 19443105 19443229 3'utr Hs2st FlyBase G11682.1 TTGTATTGTAAATACGTAATTCTCCTTCGCATAGATTTGATCTGTACTTAAGAGTAACTCATCCGTACACTTAAGCGCTACCTAAGACTTTAGCATTGAATATCGTTGACATATTACTAACCCAA 139 19443187 0.717122147 23 133 1097 0.975 1.892094603 0.225 0.122302158 0.2375 139 3 1 156 2L:19443105-19443229 8 Hs2st FBtr0081288 19442831 19443303 GTACTTAA 8mer-A1 dme-miR-252-5p 2L - 19443129 19443216 3'utr Hs2st FlyBase G8968.1 ACGTAATTCTCCTTCGCATAGATTTGATCTGTACTTAAGAGTAACTCATCCGTACACTTAAGCGCTACCTAAGACTTTAGCATTGAAT 87 19443187 0.785361728 11 83 710 0.961538462 2.096910013 0.176923077 0.379310345 0.584615385 87 5 0 125 2L:19443129-19443216 8 81.5 448 FBgn0024230 209.3333333 15.55 23.84 0.38933121 5.241157556 3.418624161 1 1 1 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 19443249 19443254 - 2L_19443249_19443254_- 1 1 1 0 Hs2st FBtr0081288 19442831 19443303 2L - 19443231 19443329 stop_codon Hs2st FlyBase G11682.2 TGTACGAGAAGATTCGGCCCAAATGATTGCAGAGGAGGCGACGGAGTCGCAGAGCGAGGATTCGGCCGACTCCAGTGATCTAACCAGGAGTCTCCGACA 72 19443254 0.913667648 5 69 345 0.977011494 1.929418926 0.103448276 0.152777778 0.298850575 72 2 0 85 2L:19443231-19443329 6 Hs2st FBtr0081288 19442831 19443303 TGATCT 6mer3-8 dme-bantam-3p 2L - 19443232 19443273 3'utr Hs2st FlyBase G8969.1 AGGATTCGGCCGACTCCAGTGATCTAACCAGGAGTCTCCGAC 26 19443254 0.766458696 3 26 124 1 1.51851394 0.151515152 0.192307692 0.363636364 26 0 0 33 2L:19443232-19443273 6 40 449 FBgn0024230 209.3333333 15.55 23.84 0.191082803 2.572347267 1.677852349 0 0 0 0.01 dme-miR-276a-3p 6mer3-8 AGTTCC 2L 19497418 19497423 + 2L_19497418_19497423_+ 1 1 1 0 swm FBtr0081245|FBtr0331326|FBtr0081244|FBtr0331325 19497383|19497383|19497383|19497383 19497978|19497835|19497835|19497978 2L + 19497382 19497484 stop_codon swm FlyBase G5373.1 TGATCCATCGCCCTCCGCTGTTGAGGCGGCCGGGAAAGTTCCGTGGGGCTCACAAGTGTTAGGAAACCCTTAACATGTATTTGTTGTTATTCTATATCTAACT 27 19497424 0.966080544 12 27 167 1 1.491361694 0.096774194 0.074074074 0.193548387 27 0 0 31 2L:19497382-19497484 6 swm FBtr0081244|FBtr0331325|FBtr0081245|FBtr0331326 19497383|19497383|19497383|19497383 19497835|19497978|19497978|19497835 AGTTCC 6mer3-8 dme-miR-276a-3p 2L + 19497404 19497472 3'utr swm FlyBase G4177.1 GAGGCGGCCGGGAAAGTTCCGTGGGGCTCACAAGTGTTAGGAAACCCTTAACATGTATTTGTTGTTATT 12 19497421 0.974695135 5 11 76 0.941176471 1.204119983 0.117647059 0.333333333 0.529411765 12 1 0 16 2L:19497404-19497472 6 10.5 450 FBgn0002044 1462.05 43.20666667 66.00333333 0.007181697 0.243018053 0.159082875 -6 -3 -4.5 0.01 dme-miR-33-5p 7mer-A1 AATGCAA 2L 19497920 19497926 + 2L_19497920_19497926_+ 0.782911824 0.782911824 0.782911824 0 swm FBtr0081245|FBtr0331325 19497383|19497383 19497978|19497978 2L + 19497901 19497944 3'utr swm FlyBase G5376.1 AAAAAATCGTAGCAACGTGAATGCAAAACAGCAAGTTATATAGA 13 19497919 0.841590246 2 12 40 0.928571429 1.113943352 0.214285714 0.076923077 0.142857143 13 1 0 13 2L:19497901-19497944 7 swm FBtr0331325|FBtr0081245 19497383|19497383 19497978|19497978 AATGCAA 7mer-A1 dme-miR-33-5p 2L + 19497898 19497933 3'utr swm FlyBase G4178.1 AGAAAAAAATCGTAGCAACGTGAATGCAAAACAGCA 14 19497920 0.778568695 2 14 34 1 1.230448921 0.117647059 0.214285714 0.352941176 14 0 0 17 2L:19497898-19497933 7 13 451 FBgn0002044 1462.05 43.20666667 66.00333333 0.008891625 0.300879494 0.19695975 1 0 0.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 19502970 19502975 - 2L_19502970_19502975_- 1 1 1 0 CG10188 FBtr0329963|FBtr0081283|FBtr0081282 19502333|19502333|19502333 19503098|19503128|19503128 2L - 19502956 19502999 3'utr CG10188 FlyBase G11737.1 ATGTACTTCCATACCTGTTGAACTGTACCTATACCATTCGAAAA 32 19502976 0.739775857 5 32 232 1 1.591064607 0.256410256 0.1875 0.333333333 32 0 0 39 2L:19502956-19502999 6 CG10188 FBtr0081282|FBtr0081283|FBtr0329963 19502333|19502333|19502333 19503128|19503128|19503098 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L - 19502957 19502998 3'utr CG10188 FlyBase G9023.1 TGTACTTCCATACCTGTTGAACTGTACCTATACCATTCGAAA 31 19502976 0.670337714 3 31 200 1 1.568201724 0.324324324 0.161290323 0.297297297 31 0 0 37 2L:19502957-19502998 6 27 452 FBgn0032796 423.2433333 9.72 14.90666667 0.06379309 2.777777778 1.811270125 1 1 1 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 19503022 19503027 - 2L_19503022_19503027_- 1 1 1 0 CG10188 FBtr0329963|FBtr0081283|FBtr0081282 19502333|19502333|19502333 19503098|19503128|19503128 2L - 19503002 19503063 3'utr CG10188 FlyBase G11738.1 GATATAAAAACCTTCTTGAAGTCATAACCGGAAGCCTGATCTTGGGCAATGAGGGGAACTGG 17 19503022 0.999722823 6 14 74 0.869565217 1 0.173913043 0.235294118 0.434782609 17 2 1 20 2L:19503002-19503063 6 CG10188 FBtr0081282|FBtr0081283|FBtr0329963 19502333|19502333|19502333 19503128|19503128|19503098 TGATCT 6mer3-8 dme-bantam-3p 2L - 19503015 19503046 3'utr CG10188 FlyBase G9024.1 GAAGTCATAACCGGAAGCCTGATCTTGGGCAA 9 19503021 0.749335943 3 7 27 0.909090909 1 0.090909091 0.111111111 0.272727273 9 1 0 10 2L:19503015-19503046 6 10.5 453 FBgn0032796 423.2433333 9.72 14.90666667 0.024808424 1.080246914 0.704382826 -5 -6 -5.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 19532732 19532739 + 2L_19532732_19532739_+ 0.63113665 0.63113665 0.63113665 0 CG10137 FBtr0081248 19532669 19532985 2L + 19532716 19532751 3'utr CG10137 FlyBase G5389.1 TTATTAGAGCAACTATTCTAGTCAGGATACCTACTC 87 19532731 0.691852162 7 84 505 0.970588235 1.995635195 0.078431373 0.126436782 0.254901961 87 3 0 99 2L:19532716-19532751 8 CG10137 FBtr0081248 19532669 19532985 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L + 19532670 19532756 3'utr CG10137 FlyBase G4187.1 GAAAGCGTACACTTAATCGATCTATTGGCCTAGCGAATTAGCGAATTTATTAGAGCAACTATTCTAGTCAGGATACCTACTCAAGGA 53 19532731 0.974949412 6 51 318 0.977272727 1.934498451 0.113636364 0.433962264 0.659090909 53 2 0 86 2L:19532670-19532756 8 68 454 FBgn0032800 178.3133333 6.72 10.33 0.38135118 10.11904762 6.582768635 1 1 1 0.01 dme-miR-1006-3p 6mer2-7 GAATTT 2L 19532930 19532935 + 2L_19532930_19532935_+ 0.999999967 0.999999999 0.999999983 0 CG10137 FBtr0081248 19532669 19532985 2L + 19532893 19532950 3'utr CG10137 FlyBase G5390.1 ATTTTTTGTACGCAATGTGATTTGTTAAATGTAACGAGAATTTTTGAAACGTCCTTAC 8 19532947 0.983916022 4 8 66 1 1.041392685 0.090909091 0.375 0.545454545 8 0 0 11 2L:19532893-19532950 6 CG10137 FBtr0081248 19532669 19532985 GAATTT 6mer2-7 dme-miR-1006-3p 2L + 19532928 19532965 3'utr CG10137 FlyBase G4189.1 GAGAATTTTTGAAACGTCCTTACAATAAATAAAGCCCA 5 19532947 0.978708868 2 5 36 1 0.903089987 0 0.6 0.75 5 0 0 8 2L:19532928-19532965 6 4.5 455 FBgn0032800 178.3133333 6.72 10.33 0.025236475 0.669642857 0.435624395 -17 -17 -17 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 2L 19536540 19536545 + 2L_19536540_19536545_+ 0.999979691 1 0.999989845 1.44E-05 CG33116 FBtr0081249 19536464 19537363 2L + 19536510 19536575 3'utr CG33116 FlyBase G5399.2 AAGTTTTTCTGTATATCAAGGAGGCTGTTTAGTTAAACAATTCTTGTGAGATTATGTATAATTTGT 103 19536539 0.612808769 16 89 921 0.884297521 1.330413773 0.099173554 0.165048544 0.289256198 103 10 4 107 2L:19536510-19536575 6 CG33116 FBtr0081249 19536464 19537363 AGTTAA 6mer3-8 dme-miR-999-3p 2L + 19536428 19536574 stop_codon CG33116 FlyBase G4194.1 AGCCACAAGCGGAGGAGCCATTGAAGAAAGATATATAAGGCATCGGATTGCGCTATTTTGGATTAGTTGCGAGTTATTTTGCAAGTTTTTCTGTATATCAAGGAGGCTGTTTAGTTAAACAATTCTTGTGAGATTATGTATAATTTG 94 19536538 0.990349243 23 86 857 0.930555556 1.649983544 0.069444444 0.404255319 0.611111111 94 8 2 134 2L:19536428-19536574 6 72.5 456 FBgn0053116 946.2166667 45.74 70.24333333 0.076620929 1.585045912 1.032126418 1 2 1.5 0.01 dme-miR-7-5p 7mer-A1 TCTTCCA 2L 19536674 19536680 + 2L_19536674_19536680_+ 0.823349562 0.823349562 0.823349562 0 CG33116 FBtr0081249 19536464 19537363 2L + 19536652 19536708 3'utr CG33116 FlyBase G5400.1 AATGACTATTCACGTAATGCTCTCTTCCAATGATAATTTTTAAACTCGGTTTACGGT 59 19536676 0.781261388 4 57 583 0.970149254 1.812913357 0.059701493 0.101694915 0.208955224 59 2 0 65 2L:19536652-19536708 7 CG33116 FBtr0081249 19536464 19537363 TCTTCCA 7mer-A1 dme-miR-7-5p 2L + 19536647 19536697 3'utr CG33116 FlyBase G4195.1 TTTCCAATGACTATTCACGTAATGCTCTCTTCCAATGATAATTTTTAAACT 24 19536676 0.917917245 4 23 225 0.971428571 1.531478917 0 0.25 0.485714286 24 1 0 34 2L:19536647-19536697 7 40 457 FBgn0053116 946.2166667 45.74 70.24333333 0.042273616 0.874508089 0.569449058 -2 -2 -2 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 19536803 19536808 + 2L_19536803_19536808_+ 1 1 1 0 CG33116 FBtr0081249 19536464 19537363 2L + 19536718 19536866 3'utr CG33116 FlyBase G5401.1 ACTTGACGTTATCTGTAATCCGTATTGTATCCAAACTTCAAAGACCCCTTGTAGATCGATTGAATTTACGAGTAATCATGACAAGTGATCTAATCTGCTGCTAAGATATCCAATAAGTATTAGGTAGTAGGCTAAAGTAGCGGCCAGGC 43 19536803 0.978171313 14 43 294 1 1.748188027 0.25 0.279069767 0.446428571 43 0 0 56 2L:19536718-19536866 6 CG33116 FBtr0081249 19536464 19537363 TGATCT 6mer3-8 dme-bantam-3p 2L + 19536711 19536859 3'utr CG33116 FlyBase G4196.1 AATTCCCACTTGACGTTATCTGTAATCCGTATTGTATCCAAACTTCAAAGACCCCTTGTAGATCGATTGAATTTACGAGTAATCATGACAAGTGATCTAATCTGCTGCTAAGATATCCAATAAGTATTAGGTAGTAGGCTAAAGTAGCG 36 19536803 0.982036807 11 32 240 0.929824561 1.423245874 0.210526316 0.388888889 0.614035088 36 3 1 53 2L:19536711-19536859 6 29 458 FBgn0053116 946.2166667 45.74 70.24333333 0.030648372 0.634018365 0.412850567 0 0 0 0.01 dme-miR-79-3p 7mer-m8 TAGCTTT 2L 19536934 19536940 + 2L_19536934_19536940_+ 0.620204031 0.620204031 0.620204031 0 CG33116 FBtr0081249 19536464 19537363 2L + 19536890 19536960 3'utr CG33116 FlyBase G5402.1 TTAACTTTGCAACTACAGAGCAGCTAACTACTTGTTCTAGCCTTTAGCTTTCCAACTTCATTGCTACGGTT 11 19536933 0.989966537 4 11 112 1 1.079181246 0 0.090909091 0.166666667 11 0 0 12 2L:19536890-19536960 7 CG33116 FBtr0081249 19536464 19537363 TAGCTTT 7mer-m8 dme-miR-79-3p 2L + 19536894 19536947 3'utr CG33116 FlyBase G4197.1 CTTTGCAACTACAGAGCAGCTAACTACTTGTTCTAGCCTTTAGCTTTCCAACTT 10 19536933 0.802010323 4 10 85 1 1.204119983 0 0.5 0.6875 10 0 0 16 2L:19536894-19536947 7 8 459 FBgn0053116 946.2166667 45.74 70.24333333 0.008454723 0.174901618 0.113889812 1 1 1 0.01 dme-miR-283-5p 7mer-m1 GATATTT 2L 19580661 19580667 - 2L_19580661_19580667_- 0.765586655 0.765586663 0.765586659 0 Hakai FBtr0081263|FBtr0331245|FBtr0331246|FBtr0081264 19580610|19580610|19580610|19580610 19581331|19580775|19580775|19581331 2L - 19580660 19580695 3'utr Hakai FlyBase G11776.1 ATGTTAAGCTGAACTGAACACTATTAAAGATATTTT 11 19580681 0.918781589 2 11 62 1 1.176091259 0 0.363636364 0.533333333 11 0 0 15 2L:19580660-19580695 7 Hakai FBtr0081264|FBtr0331246|FBtr0331245|FBtr0081263 19580610|19580610|19580610|19580610 19581331|19580775|19580775|19581331 GATATTT 7mer-m1 dme-miR-283-5p 2L - 19580660 19580698 3'utr Hakai FlyBase G9049.1 TGTATGTTAAGCTGAACTGAACACTATTAAAGATATTTT 11 19580681 0.937888754 3 10 66 0.941176471 1.204119983 0 0.363636364 0.588235294 11 1 0 16 2L:19580660-19580698 7 4 460 FBgn0032812 276.3333333 19.83333333 30.45 0.014475271 0.201680672 0.13136289 14 14 14 0.01 dme-miR-965-3p 6mer2-7 ACGCTT 2L 19580736 19580741 - 2L_19580736_19580741_- 1 1 1 0 Hakai FBtr0081263|FBtr0331245|FBtr0331246|FBtr0081264 19580610|19580610|19580610|19580610 19581331|19580775|19580775|19581331 2L - 19580702 19580813 3'utr Hakai FlyBase G11777.1 CGAGTGGCAACTGGCAGCAGTCGCAATACTACAGATAGGGGGACGAAAGCGAGGGGCTAGTAACCAGGGTAGACGCTTTAACGCAGGCACGCAGGCTTTTAATTAAGTGAAC 24 19580715 0.984079867 8 22 86 0.923076923 1.079181246 0.192307692 0.083333333 0.153846154 24 1 1 24 2L:19580702-19580813 6 Hakai FBtr0081264|FBtr0331246|FBtr0331245|FBtr0081263 19580610|19580610|19580610|19580610 19581331|19580775|19580775|19581331 ACGCTT 6mer2-7 dme-miR-965-3p 2L - 19580704 19580755 3'utr Hakai FlyBase G9050.1 AGTAACCAGGGTAGACGCTTTAACGCAGGCACGCAGGCTTTTAATTAAGTGA 10 19580716 0.713251799 5 9 43 0.904761905 1.278753601 0.285714286 0.8 0.904761905 10 2 0 19 2L:19580704-19580755 6 6 461 FBgn0032812 276.3333333 19.83333333 30.45 0.021712907 0.302521008 0.197044335 -26 -25 -25.5 0.01 dme-miR-282-5p 6mer2-7 GAGGCT 2L 19580838 19580843 - 2L_19580838_19580843_- 1 1 1 0 Hakai FBtr0081263|FBtr0081264 19580610|19580610 19581331|19581331 2L - 19580830 19580869 3'utr Hakai FlyBase G11778.1 CGCTGTTGGCCCAGGTGCCCTGATTGGAGGCTCCACCGAC 6 19580845 0.759629189 2 5 29 1 0.77815125 0.333333333 0 0 6 0 0 6 2L:19580830-19580869 6 Hakai FBtr0081264|FBtr0081263 19580610|19580610 19581331|19581331 GAGGCT 6mer2-7 dme-miR-282-5p 2L - 19580822 19580866 3'utr Hakai FlyBase G9051.1 TGTTGGCCCAGGTGCCCTGATTGGAGGCTCCACCGACGCGCCAAC 6 19580845 0.959170192 3 6 29 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2L:19580822-19580866 6 5 462 FBgn0032812 276.3333333 19.83333333 30.45 0.018094089 0.25210084 0.164203612 2 2 2 0.01 dme-miR-184-3p 6mer2-7 CCGTCC 2L 19581228 19581233 - 2L_19581228_19581233_- 1 1 1 0 Hakai FBtr0081263|FBtr0081264 19580610|19580610 19581331|19581331 2L - 19581210 19581360 stop_codon Hakai FlyBase G11779.1 GCAAGGCGAGTGGTAGCTATGGCTCCTAAACTAAGCTGTCCTGTCTATAAAAAAACAACCGCTTGCCCCTTGCAGCTCTCCGAGTCGTCTGTCCCCATATCCGTTTCCGCCTCCATTGCGTCCCGTCCCGTCCTGTCGCGGCTGCCACTGA 51 19581235 0.976629298 13 47 315 0.950819672 1.763427994 0.295081967 0.176470588 0.31147541 51 3 0 58 2L:19581210-19581360 6 Hakai FBtr0081264|FBtr0081263 19580610|19580610 19581331|19581331 CCGTCC 6mer2-7 dme-miR-184-3p 2L - 19581200 19581271 3'utr Hakai FlyBase G9052.1 TGTCCCCATATCCGTTTCCGCCTCCATTGCGTCCCGTCCCGTCCTGTCGCGGCTGCCACTGACCGGCGGTGT 20 19581235 0.973533567 7 19 115 0.96 1.079181246 0.24 0.2 0.36 20 0 1 24 2L:19581200-19581271 6 24.5 463 FBgn0032812 276.3333333 19.83333333 30.45 0.088661037 1.235294118 0.804597701 2 2 2 0.01 dme-miR-304-5p 7mer-m8 TGAGATT 2L 19586325 19586331 + 2L_19586325_19586331_+ 0.620203442 0.620203442 0.620203442 0 CG10366 FBtr0081259 19586225 19586440 2L + 19586274 19586345 3'utr CG10366 FlyBase G5446.1 GTTTCCAAATTCGCCGTATGTTGTGTATTTATAGCTGTTTAAAGATATAGTTGAGATTGTTTTGCATACACT 14 19586324 0.990378153 4 13 138 0.944444444 0.929418926 0.055555556 0.214285714 0.388888889 14 0 1 17 2L:19586274-19586345 7 CG10366 FBtr0081259 19586225 19586440 TGAGATT 7mer-m8 dme-miR-304-5p 2L + 19586280 19586343 3'utr CG10366 FlyBase G4232.1 AAATTCGCCGTATGTTGTGTATTTATAGCTGTTTAAAGATATAGTTGAGATTGTTTTGCATACA 12 19586324 0.989172878 4 12 113 1 1.230448921 0.117647059 0.333333333 0.529411765 12 0 0 17 2L:19586280-19586343 7 11 464 FBgn0032814 191.6666667 11.32 17.29666667 0.057391304 0.971731449 0.635960686 1 1 1 0.01 dme-miR-8-3p 7mer-A1 AGTATTA 2L 19730291 19730297 + 2L_19730291_19730297_+ 0.759630976 0.823349557 0.791490267 0.045055854 Lar FBtr0331242|FBtr0112800|FBtr0331239|FBtr0331240|FBtr0081260|FBtr0331241|FBtr0305950 19730161|19730161|19730161|19730161|19730161|19730161|19730161 19732069|19732069|19731561|19731561|19731561|19731561|19731561 2L + 19730162 19730375 3'utr Lar FlyBase G5452.1 AGTGCATTTCTCAATGGGATTGCCAGGTCCACAGAGCTAAAATCTCATCGACCCTGCGTTCGTTGCATACTTATTTCGAACTCTACGCATAATACGCATTTACGATATACACGGATATCATAACTCTAAAGTATTATAGCCAGCTACTGCCCACACTTACTTAATACACCTATACTTATATACGTGGATATGTTTAGTTGATAAGCGCACCCCC 55 19730297 0.978948744 28 48 331 0.876923077 1.755874856 0.230769231 0.181818182 0.307692308 55 8 0 57 2L:19730162-19730375 7 Lar FBtr0305950|FBtr0081260|FBtr0331241|FBtr0331239|FBtr0331240|FBtr0331242|FBtr0112800 19730161|19730161|19730161|19730161|19730161|19730161|19730161 19731561|19731561|19731561|19731561|19731561|19732069|19732069 AGTATTA 7mer-A1 dme-miR-8-3p 2L + 19730161 19730331 stop_codon Lar FlyBase G4239.1 GAGTGCATTTCTCAATGGGATTGCCAGGTCCACAGAGCTAAAATCTCATCGACCCTGCGTTCGTTGCATACTTATTTCGAACTCTACGCATAATACGCATTTACGATATACACGGATATCATAACTCTAAAGTATTATAGCCAGCTACTGCCCACACTTACTTAATACACC 35 19730298 0.986041395 14 26 214 0.760869565 1.243038049 0.043478261 0.285714286 0.456521739 35 10 1 35 2L:19730161-19730331 7 24 465 FBgn0000464 569.28 8.026666667 12.27666667 0.042158516 2.990033223 1.954928048 -6 -7 -6.5 0.01 dme-miR-14-3p 7mer-m8 AAGACTG 2L 19730462 19730468 + 2L_19730462_19730468_+ 0.671795832 0.671795832 0.671795832 0 Lar FBtr0331242|FBtr0112800|FBtr0331239|FBtr0331240|FBtr0081260|FBtr0331241|FBtr0305950 19730161|19730161|19730161|19730161|19730161|19730161|19730161 19732069|19732069|19731561|19731561|19731561|19731561|19731561 2L + 19730392 19730506 3'utr Lar FlyBase G5453.1 ACCATTACGATTCTTTGGGGGACTCGATCTTATATATTGCGTTCTATTTTATTGATAATGTAAACTAAAGAAGACTGTTACACGTTTAATTATCAAAACCTTATATATCAACCCA 143 19730469 0.957709914 11 138 658 0.968253968 1.961421094 0.015873016 0.244755245 0.428571429 143 5 1 183 2L:19730392-19730506 7 Lar FBtr0305950|FBtr0081260|FBtr0331241|FBtr0331239|FBtr0331240|FBtr0331242|FBtr0112800 19730161|19730161|19730161|19730161|19730161|19730161|19730161 19731561|19731561|19731561|19731561|19731561|19732069|19732069 AAGACTG 7mer-m8 dme-miR-14-3p 2L + 19730391 19730507 3'utr Lar FlyBase G4240.1 TACCATTACGATTCTTTGGGGGACTCGATCTTATATATTGCGTTCTATTTTATTGATAATGTAAACTAAAGAAGACTGTTACACGTTTAATTATCAAAACCTTATATATCAACCCAC 103 19730469 0.962167997 12 99 509 0.962732919 2.190331698 0.031055901 0.427184466 0.633540373 103 6 0 155 2L:19730391-19730507 7 111 466 FBgn0000464 569.28 8.026666667 12.27666667 0.194983137 13.82890365 9.041542221 -7 -7 -7 0.01 dme-bantam-3p 7mer-m8 TGATCTC 2L 19730947 19730953 + 2L_19730947_19730953_+ 0.661615243 0.661615218 0.661615231 0 Lar FBtr0331242|FBtr0112800|FBtr0331239|FBtr0331240|FBtr0081260|FBtr0331241|FBtr0305950 19730161|19730161|19730161|19730161|19730161|19730161|19730161 19732069|19732069|19731561|19731561|19731561|19731561|19731561 2L + 19730880 19730995 3'utr Lar FlyBase G5456.2 CTTGCATAGCGCATATTTTATAAGGCAGCTAGATTCTAAAATTAGTTTTCAAACACAACTTACGTTTTGATCTCCCCGCAAAAGATGACGAACCTTATGGACTGATCGATGTCTTG 150 19730976 0.762559265 19 140 961 0.93989071 1.934498451 0.207650273 0.193333333 0.338797814 150 10 1 172 2L:19730880-19730995 7 Lar FBtr0305950|FBtr0081260|FBtr0331241|FBtr0331239|FBtr0331240|FBtr0331242|FBtr0112800 19730161|19730161|19730161|19730161|19730161|19730161|19730161 19731561|19731561|19731561|19731561|19731561|19732069|19732069 TGATCTC 7mer-m8 dme-bantam-3p 2L + 19730855 19730996 3'utr Lar FlyBase G4242.1 ACGGTCCGTGCAATTAGTCAAAAGTCTTGCATAGCGCATATTTTATAAGGCAGCTAGATTCTAAAATTAGTTTTCAAACACAACTTACGTTTTGATCTCCCCGCAAAAGATGACGAACCTTATGGACTGATCGATGTCTTGG 120 19730976 0.789540178 17 111 695 0.945054945 2.235528447 0.335164835 0.375 0.587912088 120 10 0 172 2L:19730855-19730996 7 47 467 FBgn0000464 569.28 8.026666667 12.27666667 0.082560427 5.855481728 3.82840076 -29 -29 -29 0.01 dme-miR-970-3p 6mer2-7 CTTATG 2L 19730973 19730978 + 2L_19730973_19730978_+ 1 1 1 0 Lar FBtr0331242|FBtr0112800|FBtr0331239|FBtr0331240|FBtr0081260|FBtr0331241|FBtr0305950 19730161|19730161|19730161|19730161|19730161|19730161|19730161 19732069|19732069|19731561|19731561|19731561|19731561|19731561 2L + 19730880 19730995 3'utr Lar FlyBase G5456.2 CTTGCATAGCGCATATTTTATAAGGCAGCTAGATTCTAAAATTAGTTTTCAAACACAACTTACGTTTTGATCTCCCCGCAAAAGATGACGAACCTTATGGACTGATCGATGTCTTG 150 19730977 0.762559265 19 140 961 0.93989071 1.934498451 0.207650273 0.193333333 0.338797814 150 10 1 172 2L:19730880-19730995 6 Lar FBtr0305950|FBtr0081260|FBtr0331241|FBtr0331239|FBtr0331240|FBtr0331242|FBtr0112800 19730161|19730161|19730161|19730161|19730161|19730161|19730161 19731561|19731561|19731561|19731561|19731561|19732069|19732069 CTTATG 6mer2-7 dme-miR-970-3p 2L + 19730855 19730996 3'utr Lar FlyBase G4242.1 ACGGTCCGTGCAATTAGTCAAAAGTCTTGCATAGCGCATATTTTATAAGGCAGCTAGATTCTAAAATTAGTTTTCAAACACAACTTACGTTTTGATCTCCCCGCAAAAGATGACGAACCTTATGGACTGATCGATGTCTTGG 120 19730977 0.789540178 17 111 695 0.945054945 2.235528447 0.335164835 0.375 0.587912088 120 10 0 172 2L:19730855-19730996 6 63.5 468 FBgn0000464 569.28 8.026666667 12.27666667 0.111544407 7.911129568 5.172413793 -4 -4 -4 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 19731199 19731204 + 2L_19731199_19731204_+ 1 1 1 0 Lar FBtr0331242|FBtr0112800|FBtr0331239|FBtr0331240|FBtr0081260|FBtr0331241|FBtr0305950 19730161|19730161|19730161|19730161|19730161|19730161|19730161 19732069|19732069|19731561|19731561|19731561|19731561|19731561 2L + 19731117 19731223 3'utr Lar FlyBase G5458.1 ATTCCTGTATATACCACAGTCGATACCCGAGCTAGCCACTTATGTATGTGTAATTTAGATTGAAAAGCTATGAAAAGTTATTGTACCTAAGGTGTATGAAGACATAG 35 19731198 0.898902249 8 33 235 0.95 1.278753601 0.425 0.142857143 0.25 35 1 1 38 2L:19731117-19731223 6 Lar FBtr0305950|FBtr0081260|FBtr0331241|FBtr0331239|FBtr0331240|FBtr0331242|FBtr0112800 19730161|19730161|19730161|19730161|19730161|19730161|19730161 19731561|19731561|19731561|19731561|19731561|19732069|19732069 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 19731122 19731226 3'utr Lar FlyBase G4244.1 TGTATATACCACAGTCGATACCCGAGCTAGCCACTTATGTATGTGTAATTTAGATTGAAAAGCTATGAAAAGTTATTGTACCTAAGGTGTATGAAGACATAGAGA 40 19731198 0.933378582 8 37 265 0.947368421 1.431363764 0.298245614 0.375 0.561403509 40 2 1 54 2L:19731122-19731226 6 25.5 469 FBgn0000464 569.28 8.026666667 12.27666667 0.044793423 3.176910299 2.077111051 1 1 1 0.01 dme-miR-184-5p 6mer3-8 TGATAA 2L 19731250 19731255 + 2L_19731250_19731255_+ 1 1 1 0 Lar FBtr0331242|FBtr0112800|FBtr0331239|FBtr0331240|FBtr0081260|FBtr0331241|FBtr0305950 19730161|19730161|19730161|19730161|19730161|19730161|19730161 19732069|19732069|19731561|19731561|19731561|19731561|19731561 2L + 19731235 19731307 3'utr Lar FlyBase G5459.1 GCGAACAGATTAGAATGATAACTGTAGATATGTACTGTAGCATATAATTTTTACCATAAAATAGAGCGACACA 8 19731265 0.994101684 5 6 65 0.75 0.77815125 0.125 0 0 8 2 0 6 2L:19731235-19731307 6 Lar FBtr0305950|FBtr0081260|FBtr0331241|FBtr0331239|FBtr0331240|FBtr0331242|FBtr0112800 19730161|19730161|19730161|19730161|19730161|19730161|19730161 19731561|19731561|19731561|19731561|19731561|19732069|19732069 TGATAA 6mer3-8 dme-miR-184-5p 2L + 19731234 19731267 3'utr Lar FlyBase G4245.1 AGCGAACAGATTAGAATGATAACTGTAGATATGT 6 19731245 0.956442556 3 6 30 1 1 0 0.5 0.7 6 0 0 10 2L:19731234-19731267 6 5.5 470 FBgn0000464 569.28 8.026666667 12.27666667 0.009661327 0.685215947 0.448004344 -15 5 -5 0.01 dme-miR-2535b-3p 6mer3-8 CCGTGA 2L 19732471 19732476 - 2L_19732471_19732476_- 1 1 1 0 CG10462 FBtr0305952|FBtr0100351|FBtr0331244|FBtr0331243|FBtr0100352|FBtr0081325 19732078|19732078|19732078|19732078|19732078|19732078 19732650|19732650|19732650|19732650|19732650|19732650 2L - 19732423 19732613 3'utr CG10462 FlyBase G11785.1 AAAGTCTGGAGAGGTATTCCCACGGAATAGTGCAGGAAAGGGTCTGGCTACTCATTGTATTAAGATTCAAATGAATTAATTAATAATGGCAATTACTTTTGAAATACATTCTATTCAAATGTGGACGTGTATGTTGACCGTGAAGGAAGATGGCTATGTTTATTGTTAGCTTGAATACCAAACGAGACCAT 46 19732463 0.986060815 18 44 366 0.964912281 1.740362689 0.385964912 0.195652174 0.350877193 46 2 0 55 2L:19732423-19732613 6 CG10462 FBtr0331243|FBtr0331244|FBtr0100351|FBtr0305952|FBtr0081325|FBtr0100352 19732078|19732078|19732078|19732078|19732078|19732078 19732650|19732650|19732650|19732650|19732650|19732650 CCGTGA 6mer3-8 dme-miR-2535b-3p 2L - 19732442 19732516 3'utr CG10462 FlyBase G9054.2 TTTGAAATACATTCTATTCAAATGTGGACGTGTATGTTGACCGTGAAGGAAGATGGCTATGTTTATTGTTAGCTT 19 19732505 0.872574838 6 16 141 0.8 1.447158031 0.314285714 0.526315789 0.742857143 19 7 0 28 2L:19732442-19732516 6 15.5 471 FBgn0032815 740.9966667 29.21666667 44.68666667 0.020917773 0.53051911 0.346859615 -13 29 8 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 2L 19736733 19736738 + 2L_19736733_19736738_+ 0.99999999 1 0.999999995 0 Nf-YB FBtr0081289|FBtr0081289|FBtr0343854|FBtr0343854 19736722|19736722|19736722|19736722 19737088|19737088|19736956|19736956 2L + 19736720 19736771 stop_codon Nf-YB FlyBase G5465.1 GTAACCCCTTTCTTACTTACCCTGTTAGTTAAGGTTCTTTTGACATTAAGGA 11 19736736 0.984569941 4 11 124 1 1.176091259 0.066666667 0.363636364 0.533333333 11 0 0 15 2L:19736720-19736771 6 Nf-YB FBtr0343854|FBtr0343854|FBtr0081289|FBtr0081289 19736722|19736722|19736722|19736722 19736956|19736956|19737088|19737088 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 2L + 19736719 19736770 stop_codon Nf-YB FlyBase G4248.1 AGTAACCCCTTTCTTACTTACCCTGTTAGTTAAGGTTCTTTTGACATTAAGG 14 19736736 0.981739131 6 14 160 1 1.255272505 0.111111111 0.285714286 0.444444444 14 0 0 18 2L:19736719-19736770 6 11 472 FBgn0032816 140.6666667 20.89666667 32.17 0.078199052 0.526399745 0.341933478 -3 -3 -3 0.01 dme-miR-1012-3p 7mer-m8 TTGACTA 2L 19736823 19736829 + 2L_19736823_19736829_+ 0.631525999 0.631525999 0.631525999 0 Nf-YB FBtr0081289|FBtr0343854 19736722|19736722 19737088|19736956 2L + 19736806 19736837 3'utr Nf-YB FlyBase G5466.1 CTAACAGTACACCTTGATTGACTATTTAAGTT 6 19736823 0.874956832 4 6 39 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2L:19736806-19736837 7 Nf-YB FBtr0343854|FBtr0081289 19736722|19736722 19736956|19737088 TTGACTA 7mer-m8 dme-miR-1012-3p 2L + 19736806 19736842 3'utr Nf-YB FlyBase G4249.1 CTAACAGTACACCTTGATTGACTATTTAAGTTAATAT 7 19736824 0.654809606 5 7 62 1 1.079181246 0.083333333 0.428571429 0.666666667 7 0 0 12 2L:19736806-19736842 7 6.5 473 FBgn0032816 140.6666667 20.89666667 32.17 0.046208531 0.311054395 0.202051601 0 -1 -0.5 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT 2L 19743020 19743025 - 2L_19743020_19743025_- 1 1 1 0 CG10631 FBtr0081324 19742815 19743219 2L - 19742965 19743079 3'utr CG10631 FlyBase G11803.1 TCATAAGTGGCTTGTGAAGAAAAGATATGCCATACAAAGAAACAAACACAAAATGTTCCTTAAGTTTTTGTTTTTACTTATTATACATACGTACTTTAACTGTGAGATAAATGTG 20 19743026 0.963390161 9 19 110 0.964285714 1.130333768 0.035714286 0.25 0.464285714 20 0 1 27 2L:19742965-19743079 6 CG10631 FBtr0081324 19742815 19743219 GTTCCT 6mer2-7 dme-miR-276a-3p 2L - 19743016 19743079 3'utr CG10631 FlyBase G9074.1 TCATAAGTGGCTTGTGAAGAAAAGATATGCCATACAAAGAAACAAACACAAAATGTTCCTTAAG 14 19743026 0.943741751 6 14 56 1 1.255272505 0 0.285714286 0.444444444 14 0 0 18 2L:19743016-19743079 6 8.5 474 FBgn0032817 1456.62 14.47 22.22333333 0.005835427 0.587422253 0.382480876 1 1 1 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 1976171 1976177 - 2L_1976171_1976177_- 0.658999527 0.658999527 0.658999527 0 CG15356 FBtr0077869 1975461 1976541 2L - 1976108 1976217 3'utr CG15356 FlyBase G6882.1 CCTGGGAGCCCGGAGTCGATCACCTCCCTCCTGTAAATAGGGCAGCTGCCTCTGCGGACTACCTTAATTTGTATAGCTTGTAAATAGATTCCACACTTCGCCCAGAAACC 17 1976192 0.971213245 6 15 94 0.952380952 1 0.333333333 0.176470588 0.333333333 17 0 1 20 2L:1976108-1976217 7 CG15356 FBtr0077869 1975461 1976541 GGCAGCT 7mer-m8 dme-miR-980-3p 2L - 1976156 1976241 3'utr CG15356 FlyBase G5378.1 GCGCCCATTTCATCCGCCTGCAATCCTGGGAGCCCGGAGTCGATCACCTCCCTCCTGTAAATAGGGCAGCTGCCTCTGCGGACTAC 12 1976186 0.960362997 6 12 68 1 1.204119983 0.3125 0.25 0.4375 12 0 0 16 2L:1976156-1976241 7 4 475 FBgn0031377 219.9966667 6.103333333 9.273333333 0.018182094 0.655379574 0.431344357 15 9 12 0.01 dme-miR-932-5p 6mer3-8 GGAATT 2L 1976265 1976270 - 2L_1976265_1976270_- 1 1 1 0 CG15356 FBtr0077869 1975461 1976541 2L - 1976235 1976299 3'utr CG15356 FlyBase G6883.1 ATAGTATCGTTTAGTGAAAAGTATACCCTGGAATTCGTGTTAGTTTTAGTTTAGTTAAGCGCCCA 43 1976276 0.852619947 5 40 271 0.946428571 1.72427587 0.25 0.209302326 0.392857143 43 3 0 53 2L:1976235-1976299 6 CG15356 FBtr0077869 1975461 1976541 GGAATT 6mer3-8 dme-miR-932-5p 2L - 1976244 1976299 3'utr CG15356 FlyBase G5379.1 ATAGTATCGTTTAGTGAAAAGTATACCCTGGAATTCGTGTTAGTTTTAGTTTAGTT 27 1976276 0.977515709 5 27 181 1 1.643452676 0.227272727 0.481481481 0.681818182 27 0 0 44 2L:1976244-1976299 6 31 476 FBgn0031377 219.9966667 6.103333333 9.273333333 0.140911226 5.079191699 3.342918763 6 6 6 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 2L 1976453 1976458 - 2L_1976453_1976458_- 1 1 1 0 CG15356 FBtr0077869 1975461 1976541 2L - 1976393 1976511 3'utr CG15356 FlyBase G6884.1 AGAACGCACACACACACAGCAGACCCGGTTTGAATTAGATTTAGTTGGTAGTTTAGCTTGAATGTCGAAGGTTTTCCCACTAATTTCCAATTATCGCAACCCGCAGCCTTGGAGCAAAG 63 1976459 0.987509438 10 57 511 0.901408451 1.505149978 0.14084507 0.095238095 0.197183099 63 6 1 64 2L:1976393-1976511 6 CG15356 FBtr0077869 1975461 1976541 TAGCTT 6mer3-8 dme-miR-79-3p 2L - 1976438 1976508 3'utr CG15356 FlyBase G5380.1 ACGCACACACACACAGCAGACCCGGTTTGAATTAGATTTAGTTGGTAGTTTAGCTTGAATGTCGAAGGTTT 37 1976459 0.985148426 6 37 303 1 1.755874856 0.263157895 0.486486486 0.666666667 37 0 0 57 2L:1976438-1976508 6 28 477 FBgn0031377 219.9966667 6.103333333 9.273333333 0.127274656 4.587657018 3.019410496 1 1 1 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 2L 19776906 19776911 - 2L_19776906_19776911_- 1 1 1 0 CdGAPr FBtr0300966|FBtr0081318|FBtr0332179|FBtr0300967 19776255|19775102|19774872|19776255 19776941|19776941|19776941|19776941 2L - 19776852 19777019 stop_codon CdGAPr FlyBase G11831.1 AACAGAGAAAAGATCTCACCACAATTCTCAATACGCGACGTGACAGCGATGTTCGAATCTCGTTCACAAAATCAATAGGCTAAGGCAACTTTAGCAACTAATTACATCGAAAAAATGAGACCGCTACCTACATATAATCACAGTTCTGGAGCAGCGTGTATATATGCC 84 19776904 0.980423884 17 80 370 0.946808511 1.648360011 0.117021277 0.119047619 0.212765957 84 4 1 89 2L:19776852-19777019 6 CdGAPr FBtr0332179|FBtr0300967|FBtr0300966|FBtr0081318 19774872|19776255|19776255|19775102 19776941|19776941|19776941|19776941 GAAAAA 6mer3-8 dme-miR-980-5p 2L - 19776848 19776916 5'utr CdGAPr FlyBase G9092.1 ACATCGAAAAAATGAGACCGCTACCTACATATAATCACAGTTCTGGAGCAGCGTGTATATATGCCAATG 25 19776904 0.974267814 5 24 75 0.973684211 1.568201724 0.052631579 0.4 0.605263158 25 1 0 37 2L:19776848-19776916 6 26 478 FBgn0032821 977 18.21666667 27.97 0.026612078 1.42726441 0.929567394 -7 -7 -7 0.01 dme-miR-970-3p 6mer2-7 CTTATG 2L 19793783 19793788 - 2L_19793783_19793788_- 1 1 1 0 fs(2)ltoPP43 FBtr0332246|FBtr0081317 19793609|19793484 19794265|19794524 2L - 19793737 19793831 3'utr fs(2)ltoPP43 FlyBase G11855.1 AGTGTACTATTTGGAATCGTTTTAGGCAAATGTCTCTCATTACCTTATGTTCATAGAATTAATTAGCTATTAGATTAGAATAATTTACCCCCACA 23 19793801 0.990687535 11 20 204 0.884615385 1.06069784 0.192307692 0.130434783 0.230769231 23 2 1 23 2L:19793737-19793831 6 fs(2)ltoPP43 FBtr0081317|FBtr0332246 19793484|19793609 19794524|19794265 CTTATG 6mer2-7 dme-miR-970-3p 2L - 19793775 19793813 3'utr fs(2)ltoPP43 FlyBase G9106.1 GTTTTAGGCAAATGTCTCTCATTACCTTATGTTCATAGA 12 19793792 0.674375356 3 11 96 0.933333333 1.146128036 0.133333333 0.166666667 0.333333333 12 1 0 14 2L:19793775-19793813 6 12.5 479 FBgn0004811 606.5633333 48.93333333 75.4 0.020607906 0.255449591 0.165782493 13 4 8.5 0.01 "dme-miR-995-3p,dme-miR-998-3p" 7mer-A1 GGTGCTA 2L 19794454 19794460 - 2L_19794454_19794460_- 0.823349562 0.823349562 0.823349562 0 fs(2)ltoPP43 FBtr0081317 19793484 19794524 2L - 19794446 19794483 5'utr fs(2)ltoPP43 FlyBase G11858.1 TCTAAGCGGTGTGTCTGTGTGTCGGTGCTATGGGCGTA 9 19794453 0.82185157 5 8 70 0.909090909 1 0.363636364 0.222222222 0.363636364 9 1 0 10 2L:19794446-19794483 7 fs(2)ltoPP43 FBtr0081317 19793484 19794524 GGTGCTA 7mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 2L - 19794443 19794480 5'utr fs(2)ltoPP43 FlyBase G9108.1 AAGCGGTGTGTCTGTGTGTCGGTGCTATGGGCGTATCT 9 19794454 0.815659624 3 9 77 1 1.041392685 0.272727273 0.222222222 0.363636364 9 0 0 11 2L:19794443-19794480 7 9 480 FBgn0004811 606.5633333 48.93333333 75.4 0.014837692 0.183923706 0.119363395 -7 -6 -6.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 1984546 1984551 - 2L_1984546_1984551_- 1 1 1 0 Got2 FBtr0077867|FBtr0077868 1984510|1984510 1984705|1984705 2L - 1984520 1984617 3'utr Got2 FlyBase G6898.1 TGCGAAGTCTAGATAAGCCAATGCATTTTGCACACTCTCTATCCATATCTCTGTATATAAGCTAAATGATCTGCCTTTTAAAAAATAAAGCATTTAAA 290 1984551 0.780995854 17 275 2269 0.953168044 1.693978059 0.060606061 0.196551724 0.358126722 290 11 6 346 2L:1984520-1984617 6 Got2 FBtr0077867|FBtr0077868 1984510|1984510 1984705|1984705 TGATCT 6mer3-8 dme-bantam-3p 2L - 1984527 1984621 3'utr Got2 FlyBase G5386.1 AAATTGCGAAGTCTAGATAAGCCAATGCATTTTGCACACTCTCTATCCATATCTCTGTATATAAGCTAAATGATCTGCCTTTTAAAAAATAAAGC 163 1984551 0.796026987 18 155 1210 0.963709677 1.901276646 0.056451613 0.374233129 0.588709677 163 7 2 239 2L:1984527-1984621 6 207.5 481 FBgn0001125 531.6666667 41.34 63.08 0.390282132 5.019351717 3.289473684 0 0 0 0.01 dme-miR-8-3p 7mer-m8 CAGTATT 2L 20058264 20058270 - 2L_20058264_20058270_- 0.661615243 0.661615243 0.661615243 0 barr FBtr0081348|FBtr0343850|FBtr0081349 20058161|20058161|20058161 20058384|20058384|20058384 2L - 20058234 20058365 3'utr barr FlyBase G11864.2 AATTCATAGTTCTAGTTGCCCTTAAATGCTGTTACAATTTATTTTCACGGCTACTCCTTAATCTCTTACCTCTATTTTTAACTCCCAATTCGTATCAGTATTCTGAAACAGATATCCTCACCCCAGTCGAAT 86 20058271 0.74930785 14 80 686 0.940594059 1.977723605 0.00990099 0.151162791 0.277227723 86 6 0 95 2L:20058234-20058365 7 barr FBtr0081348|FBtr0343850|FBtr0081349 20058161|20058161|20058161 20058384|20058384|20058384 CAGTATT 7mer-m8 dme-miR-8-3p 2L - 20058240 20058288 3'utr barr FlyBase G9115.2 TTAACTCCCAATTCGTATCAGTATTCTGAAACAGATATCCTCACCCCAG 32 20058271 0.734508833 7 24 227 0.803921569 1.612783857 0.078431373 0.4375 0.647058824 32 10 0 41 2L:20058240-20058288 7 31 482 FBgn0014127 727.3466667 33.53666667 51.05 0.042620667 0.924361395 0.607247796 1 1 1 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 20063902 20063907 + 2L_20063902_20063907_+ 1 1 1 0 lok FBtr0306234 20063184 20064378 2L + 20063840 20063953 3'utr lok FlyBase G5496.1 CGACGACGTTTTGCAGAGCAGCTGGCTGCGCGATGCGCCCATGCTGCAGAAGGCGAAGAGGCTGATGAAGCTCGATGGCATGGAAATCGAGGAGGAGAACTTCCTTGAGCCACC 15 20063905 0.981906363 6 14 38 0.947368421 1.255272505 0.473684211 0.266666667 0.421052632 15 1 0 18 2L:20063840-20063953 6 lok FBtr0306234 20063184 20064378 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L + 20063855 20063924 3'utr lok FlyBase G4275.1 GAGCAGCTGGCTGCGCGATGCGCCCATGCTGCAGAAGGCGAAGAGGCTGATGAAGCTCGATGGCATGGAA 7 20063905 0.895168659 3 7 23 1 1.113943352 0.307692308 0.857142857 0.923076923 7 0 0 13 2L:20063855-20063924 6 6.5 483 FBgn0019686 524.4266667 29.24666667 44.53333333 0.012394488 0.22224755 0.145958084 -3 -3 -3 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 2L 20063986 20063991 + 2L_20063986_20063991_+ 1 1 1 0 lok FBtr0081330|FBtr0306234|FBtr0081328|FBtr0081329 20063974|20063184|20063974|20063974 20064378|20064378|20064381|20064381 2L + 20063966 20064021 stop_codon lok FlyBase G5497.1 GCGACGCTAGGTTTCGTTTCTGTGTTTCCATCGTTAATACGTGAGGGTCGAGGCGC 49 20063984 0.73622517 10 24 381 0.545454545 1.176091259 0.327272727 0.12244898 0.218181818 49 24 1 30 2L:20063966-20064021 6 lok FBtr0081328|FBtr0081329|FBtr0081330|FBtr0306234 20063974|20063974|20063974|20063184 20064381|20064381|20064378|20064378 TGTGTT 6mer3-8 dme-miR-317-3p 2L + 20063938 20064006 stop_codon lok FlyBase G4276.1 ACTTCCTTGAGCCACCCACCAAGCGATCGCGACGCTAGGTTTCGTTTCTGTGTTTCCATCGTTAATACG 24 20063983 0.997549566 5 9 143 0.342857143 1.079181246 0.285714286 0.416666667 0.6 24 23 0 12 2L:20063938-20064006 6 16.5 484 FBgn0019686 524.4266667 29.24666667 44.53333333 0.031462931 0.564166857 0.370508982 2 3 2.5 0.01 dme-miR-276a-3p 7mer-A1 GTTCCTA 2L 20073147 20073153 + 2L_20073147_20073153_+ 0.823349562 0.823349562 0.823349562 0 bwa FBtr0081331 20072671 20073719 2L + 20073118 20073170 3'utr bwa FlyBase G5504.1 AATTCATCCCATGACTTCCAGAACAAATGGTTCCTACGCTTTCCCAAAGAGAC 16 20073145 0.966319387 3 16 85 1 1.255272505 0.055555556 0.125 0.222222222 16 0 0 18 2L:20073118-20073170 7 bwa FBtr0081331 20072671 20073719 GTTCCTA 7mer-A1 dme-miR-276a-3p 2L + 20073097 20073166 3'utr bwa FlyBase G4282.1 GACTGTGATATGTTATGAACTAATTCATCCCATGACTTCCAGAACAAATGGTTCCTACGCTTTCCCAAAG 14 20073145 0.990700854 3 13 78 0.894736842 1.230448921 0.052631579 0.357142857 0.526315789 14 2 0 17 2L:20073097-20073166 7 13 485 FBgn0045064 300.39 20.15 30.82666667 0.043277073 0.64516129 0.421712803 2 2 2 0.01 dme-miR-283-5p 6mer3-8 TGATAT 2L 20073504 20073509 + 2L_20073504_20073509_+ 1 1 1 0 bwa FBtr0331184|FBtr0081331 20073453|20072671 20073719|20073719 2L + 20073484 20073521 3'utr bwa FlyBase G5505.1 AAACAGAGACATACACAGCGTGATATAAGTTAGAGTTG 15 20073510 0.906964008 3 11 80 0.65 1.113943352 0.25 0.266666667 0.45 15 7 0 13 2L:20073484-20073521 6 bwa FBtr0331184|FBtr0081331 20073453|20072671 20073719|20073719 TGATAT 6mer3-8 dme-miR-283-5p 2L + 20073488 20073523 3'utr bwa FlyBase G4283.1 AGAGACATACACAGCGTGATATAAGTTAGAGTTGCA 8 20073495 0.884015696 3 6 43 0.818181818 0.954242509 0.272727273 0.375 0.545454545 8 2 0 9 2L:20073488-20073523 6 11.5 486 FBgn0045064 300.39 20.15 30.82666667 0.038283565 0.570719603 0.373053633 -6 9 1.5 0.01 dme-miR-277-3p 6mer3-8 TGCATT 2L 20081774 20081779 - 2L_20081774_20081779_- 1 1 1 0 fok FBtr0310559 20081604 20082782 2L - 20081761 20081790 3'utr fok FlyBase G11884.1 GATTTAACAATTGCATTAGTCATTTAAGTA 6 20081775 0.743476026 3 6 50 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 2L:20081761-20081790 6 fok FBtr0310559 20081604 20082782 TGCATT 6mer3-8 dme-miR-277-3p 2L - 20081762 20081796 3'utr fok FlyBase G9128.1 AAAAACGATTTAACAATTGCATTAGTCATTTAAGT 6 20081775 0.69648804 4 6 51 1 1 0.4 0.333333333 0.6 6 0 0 10 2L:20081762-20081796 6 6 487 FBgn0263773 896.66 79.66 118.1266667 0.0066915 0.07532011 0.050792934 -4 -4 -4 0.01 dme-miR-999-3p 6mer2-7 GTTAAC 2L 20081881 20081886 - 2L_20081881_20081886_- 1 1 1 0 fok FBtr0310559 20081604 20082782 2L - 20081853 20081926 3'utr fok FlyBase G11885.1 AAGTTGAAATTGTTCAAAAGTTTATGCCTGGTTACATTTTGTTAACTCAACTTGTCGTTACAGAACAGAAATTG 22 20081875 0.982490947 4 21 162 1 1.380211242 0.125 0.090909091 0.166666667 22 0 0 24 2L:20081853-20081926 6 fok FBtr0310559 20081604 20082782 GTTAAC 6mer2-7 dme-miR-999-3p 2L - 20081863 20081887 3'utr fok FlyBase G9129.1 TGTTAACTCAACTTGTCGTTACAGA 6 20081875 0.717073317 2 6 40 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 2L:20081863-20081887 6 12.5 488 FBgn0263773 896.66 79.66 118.1266667 0.013940624 0.156916897 0.105818613 -11 -11 -11 0.01 dme-miR-980-3p 7mer-A1 GCAGCTA 2L 20082577 20082583 - 2L_20082577_20082583_- 0.823349562 0.823349562 0.823349562 0 fok FBtr0310558|FBtr0310559 20082302|20081604 20082782|20082782 2L - 20082571 20082613 3'utr fok FlyBase G11891.1 AGATTGCGCGAGAGAGCGAGACAGCAGCCTGCAGCTACAATAA 13 20082584 0.747986033 4 11 19 0.857142857 0.77815125 0.214285714 0.076923077 0.142857143 13 1 1 12 2L:20082571-20082613 7 fok FBtr0310558|FBtr0310559 20082302|20081604 20082782|20082782 GCAGCTA 7mer-A1 dme-miR-980-3p 2L - 20082570 20082629 3'utr fok FlyBase G9132.1 AAGCTGTCGAAGACGAAGATTGCGCGAGAGAGCGAGACAGCAGCCTGCAGCTACAATAAT 10 20082578 0.825257513 5 8 21 0.833333333 1.176091259 0.555555556 0.5 0.722222222 10 3 0 15 2L:20082570-20082629 7 8 489 FBgn0263773 896.66 79.66 118.1266667 0.008921999 0.100426814 0.067723912 1 -5 -2 0.01 dme-miR-252-5p 6mer3-8 GTACTT 2L 20089976 20089981 - 2L_20089976_20089981_- 1 1 1 0 CG10747 FBtr0331618|FBtr0081341 20089634|20089634 20090028|20090028 2L - 20089977 20090014 3'utr CG10747 FlyBase G11901.1 AAGGCAGAGGGAACACATGGTTATTAGCCTGCGGTACT 10 20089993 0.970938425 4 10 59 1 1.079181246 0.416666667 0.2 0.333333333 10 0 0 12 2L:20089977-20090014 4 CG10747 FBtr0081341|FBtr0331618 20089634|20089634 20090028|20090028 GTACTT 6mer3-8 dme-miR-252-5p 2L - 20089972 20090012 3'utr CG10747 FlyBase G9137.1 GGCAGAGGGAACACATGGTTATTAGCCTGCGGTACTTTTAA 5 20089994 0.970964356 3 5 32 1 0.84509804 0.285714286 0.2 0.428571429 5 0 0 7 2L:20089972-20090012 6 6 490 FBgn0032845 41.66666667 3.346666667 5.133333333 0.144 1.792828685 1.168831169 12 13 12.5 0.01 dme-miR-1006-3p 6mer3-8 CGAATT 2L 20093153 20093158 - 2L_20093153_20093158_- 1 1 1 0 Taf13 FBtr0081340 20093086 20093223 2L - 20093124 20093196 3'utr Taf13 FlyBase G11903.1 CCAGGTATAAGCCAAACCTAGCAGTTAGCTCCAAGATGCGAATTATTTTTAATGTCTTTAATACTCTAAGCTA 18 20093188 0.967328873 8 18 99 1 1.322219295 0.095238095 0.166666667 0.285714286 18 0 0 21 2L:20093124-20093196 6 Taf13 FBtr0081340 20093086 20093223 CGAATT 6mer3-8 dme-miR-1006-3p 2L - 20093139 20093195 3'utr Taf13 FlyBase G9139.1 CAGGTATAAGCCAAACCTAGCAGTTAGCTCCAAGATGCGAATTATTTTTAATGTCTT 7 20093169 0.987594947 5 6 45 0.777777778 0.84509804 0.222222222 0.285714286 0.444444444 7 2 0 7 2L:20093139-20093195 6 6.5 491 FBgn0032847 298 62.63 96.09 0.021812081 0.103784129 0.067644916 30 11 20.5 0.01 dme-miR-965-3p 6mer3-8 TACGCT 2L 201533 201538 + 2L_201533_201538_+ 1 1 1 0 spen FBtr0330652|FBtr0332336|FBtr0078122|FBtr0330653|FBtr0078123|FBtr0078121|FBtr0306341|FBtr0332337 201413|201413|201413|201413|201413|201413|201413|201413 201588|203250|201588|203250|203250|203397|201588|201588 2L + 201461 201586 3'utr spen FlyBase G617.1 CCAGATGTTAAACTTCACAGGCTTACACGACAACATAAGAGGAACCAGATAAAGAAACCAACAAAAACATGTTACGCTCTTCTAGTATTTTAAGTAATTTTAAATAGCGATTAAACAAGCAAAAGT 693 201532 0.947549737 23 669 7251 0.9625323 2.173186268 0.025839793 0.098124098 0.19250646 693 25 4 745 2L:201461-201586 6 spen FBtr0078123|FBtr0078121|FBtr0332336|FBtr0330653 201413|201413|201413|201413 203250|203397|203250|203250 TACGCT 6mer3-8 dme-miR-965-3p 2L + 201471 201604 3'utr spen FlyBase G492.2 AACTTCACAGGCTTACACGACAACATAAGAGGAACCAGATAAAGAAACCAACAAAAACATGTTACGCTCTTCTAGTATTTTAAGTAATTTTAAATAGCGATTAAACAAGCAAAAGTTTAAAAAAAAGCAAAGGA 392 201532 0.990917382 21 357 3876 0.92293578 1.6601753 0.044036697 0.304347826 0.500917431 391 32 10 503 2L:201471-201604 6 500.5 492 FBgn0016977 7307.703333 43.43 66.34333333 0.06848937 11.52429196 7.544088831 1 1 1 0.01 dme-bantam-3p 8mer-A1 TGATCTCA 2L 201860 201867 + 2L_201860_201867_+ 0.631136385 0.631136385 0.631136385 0 spen FBtr0332336|FBtr0330653|FBtr0078123|FBtr0078121 201413|201413|201413|201413 203250|203250|203250|203397 2L + 201800 201890 3'utr spen FlyBase G618.3 TTATATAACTCTCCGTAATTAAAAACCTTAAAGAAAAAGCTTGCAAAGTATCGTTAAGTTTGATCTCAAGAAAGAATGTTTTATTTTTGCT 1179 201859 0.786842431 15 1148 9915 0.973856209 2.086036093 0.328976035 0.146734521 0.269426289 1179 26 10 1341 2L:201800-201890 8 spen FBtr0078123|FBtr0078121|FBtr0332336|FBtr0330653 201413|201413|201413|201413 203250|203397|203250|203250 TGATCTCA 8mer-A1 dme-bantam-3p 2L + 201788 201902 3'utr spen FlyBase G495.1 TGTCTAAATTAATTATATAACTCTCCGTAATTAAAAACCTTAAAGAAAAAGCTTGCAAAGTATCGTTAAGTTTGATCTCAAGAAAGAATGTTTTATTTTTGCTTATTTAAAAAGA 710 201859 0.986641201 16 680 5881 0.957364341 1.994756945 0.304263566 0.322535211 0.533914729 710 35 9 988 2L:201788-201902 8 935 493 FBgn0016977 7307.703333 43.43 66.34333333 0.127947175 21.52889708 14.09335276 1 1 1 0.01 dme-miR-282-5p 7mer-m8 AGAGGCT 2L 202284 202290 + 2L_202284_202290_+ 0.631524569 0.631524569 0.631524569 0 spen FBtr0332336|FBtr0330653|FBtr0078123|FBtr0078121 201413|201413|201413|201413 203250|203250|203250|203397 2L + 201907 202413 3'utr spen FlyBase G619.1 AACAAACAGAAAAACCTACACATACAAATTGAATTGAAAGAAATGTTACAGAAAGCTTACAACATATTAACTGTTTACTGTACTATGCATACTACTACCCATACATAATATTAATATTCGATCCTAATCCTAAAACGATTAAGTTTTTATTGGTGAATAACTTTCGACTACTTCGATAGAAACGTAACTACACCACGTTATACAAAGTTTCCGCCTTCGAACAACCGACCATTTTTTTTGACAGATCGGTTCCTTGGCTCTATGGAATGCCTGCATATAAAACTAGTATACAGGGCCTAGCATAGACCCAAAGAACTTAAGATGAGTCCGGACTGTCACCCACGCTGTTAAGCACAATTAGGTTTAAAGTTGCGCCCAGAGGCTTTTCCTACGATAACATACACACACATACATTATACTACGATTATTTATCTAGACGCGTATTTAATTATAATTAATATGTTAAGCTCATTATTTTAAAACTCAGACACGTTTCACATCGTGTTT 497 202291 0.982279671 84 457 3689 0.922535211 2.020361283 0.107394366 0.116700201 0.227112676 497 40 4 524 2L:201907-202413 7 spen FBtr0078123|FBtr0078121|FBtr0332336|FBtr0330653 201413|201413|201413|201413 203250|203397|203250|203250 AGAGGCT 7mer-m8 dme-miR-282-5p 2L + 202092 202305 3'utr spen FlyBase G496.1 AACTACACCACGTTATACAAAGTTTCCGCCTTCGAACAACCGACCATTTTTTTTGACAGATCGGTTCCTTGGCTCTATGGAATGCCTGCATATAAAACTAGTATACAGGGCCTAGCATAGACCCAAAGAACTTAAGATGAGTCCGGACTGTCACCCACGCTGTTAAGCACAATTAGGTTTAAAGTTGCGCCCAGAGGCTTTTCCTACGATAACA 261 202291 0.823164389 33 237 1904 0.912234043 1.632204133 0.085106383 0.346153846 0.54787234 260 26 7 343 2L:202092-202305 7 178 494 FBgn0016977 7307.703333 43.43 66.34333333 0.024357858 4.09854939 2.683012611 -7 -7 -7 0.01 dme-miR-968-5p 6mer3-8 ACTACT 2L 202757 202762 + 2L_202757_202762_+ 1 1 1 0 spen FBtr0332336|FBtr0330653|FBtr0078123|FBtr0078121 201413|201413|201413|201413 203250|203250|203250|203397 2L + 202745 202841 3'utr spen FlyBase G621.1 AAAAATCTATATACTACTCTCCTTGAACACTCCCTAAACTTAAACGTAATTTTTTACACAACTTGTAAATTATGTAACCGGAATAATATAGAAAGCA 38 202768 0.967660967 9 35 229 0.909090909 1.602059991 0.045454545 0.131578947 0.25 38 4 0 40 2L:202745-202841 6 spen FBtr0078123|FBtr0078121|FBtr0332336|FBtr0330653 201413|201413|201413|201413 203250|203397|203250|203250 ACTACT 6mer3-8 dme-miR-968-5p 2L + 202748 202791 3'utr spen FlyBase G499.1 AATCTATATACTACTCTCCTTGAACACTCCCTAAACTTAAACGT 26 202768 0.805950366 4 25 168 0.941176471 1.505149978 0.029411765 0.269230769 0.441176471 26 2 0 32 2L:202748-202791 6 25 495 FBgn0016977 7307.703333 43.43 66.34333333 0.003421047 0.575638959 0.376827614 -11 -11 -11 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 20344937 20344942 + 2L_20344937_20344942_+ 1 1 1 0 spir FBtr0339234 20344661 20348386 2L + 20344911 20344986 5'utr spir FlyBase G5541.1 AATCTCGAAATATTTTGTAAAAACAAATGTGAATGTAGAAATAAAAGAAAGTCTACTGCAATTCGCCCCTAGTATT 23 20344944 0.755527657 8 23 139 1 1.477121255 0.233333333 0.260869565 0.433333333 23 0 0 30 2L:20344911-20344986 6 spir FBtr0339234 20344661 20348386 ATGTGA 6mer3-8 dme-miR-1003-3p 2L + 20344922 20344991 5'utr spir FlyBase G4303.1 ATTTTGTAAAAACAAATGTGAATGTAGAAATAAAAGAAAGTCTACTGCAATTCGCCCCTAGTATTATTTA 31 20344944 0.813418026 5 31 156 1 1.579783597 0.289473684 0.193548387 0.342105263 31 0 0 38 2L:20344922-20344991 6 22.5 496 FBgn0003475 1306.356667 49.26 74.34 0.017223474 0.456760049 0.302663438 -7 -7 -7 0.01 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 20345095 20345102 + 2L_20345095_20345102_+ 0.625364919 0.625364919 0.625364919 0 spir FBtr0339234 20344661 20348386 2L + 20345071 20345114 3'utr spir FlyBase G5542.1 TGTATTTTTAACTTGACAAAAAATTACGCTTACAAACAAAATAA 84 20345094 0.833271381 4 81 387 0.98019802 1.995635195 0 0.166666667 0.306930693 84 2 0 99 2L:20345071-20345114 8 spir FBtr0339234 20344661 20348386 TACGCTTA 8mer-A1 dme-miR-965-3p 2L + 20345039 20345114 3'utr spir FlyBase G4304.1 TTTCTCGGCTGCCAATAATCGTATAAAAATAATGTATTTTTAACTTGACAAAAAATTACGCTTACAAACAAAATAA 57 20345094 0.946662175 4 56 242 1 1.908485019 0 0.263157895 0.481481481 57 0 0 81 2L:20345039-20345114 8 68.5 497 FBgn0003475 1306.356667 49.26 74.34 0.05243591 1.390580593 0.921442023 1 1 1 0.01 dme-miR-305-3p 6mer2-7 TGTGCC 2L 20346153 20346158 + 2L_20346153_20346158_+ 1 1 1 0 spir FBtr0339234 20344661 20348386 2L + 20346135 20346169 3'utr spir FlyBase G5543.1 AGCGTCGCGTCTGCTTCCTGTGCCTGCGCACTCGG 7 20346153 0.813906897 2 7 51 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 2L:20346135-20346169 6 spir FBtr0339234 20344661 20348386 TGTGCC 6mer2-7 dme-miR-305-3p 2L + 20346133 20346166 3'utr spir FlyBase G4305.1 AAAGCGTCGCGTCTGCTTCCTGTGCCTGCGCACT 5 20346153 0.708734623 2 5 35 1 0.84509804 0 0.4 0.571428571 5 0 0 7 2L:20346133-20346166 6 6 498 FBgn0003475 1306.356667 49.26 74.34 0.004592926 0.12180268 0.08071025 0 0 0 0.01 dme-bantam-3p 7mer-m8 TGATCTC 2L 20346351 20346357 + 2L_20346351_20346357_+ 0.661615243 0.661615243 0.661615243 0 spir FBtr0339234 20344661 20348386 2L + 20346335 20346375 3'utr spir FlyBase G5544.1 AACGTGCCCCTCGTGCTGATCTCGCCATCGCTGCTGTCCAG 15 20346351 0.773587931 2 14 98 0.933333333 1.146128036 0.266666667 0 0 15 1 0 14 2L:20346335-20346375 7 spir FBtr0339234 20344661 20348386 TGATCTC 7mer-m8 dme-bantam-3p 2L + 20346334 20346375 3'utr spir FlyBase G4306.1 AAACGTGCCCCTCGTGCTGATCTCGCCATCGCTGCTGTCCAG 7 20346350 0.728864804 3 7 41 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 2L:20346334-20346375 7 11 499 FBgn0003475 1306.356667 49.26 74.34 0.008420365 0.223304913 0.147968792 0 1 0.5 0.01 dme-miR-79-3p 6mer2-7 AGCTTT 2L 20347554 20347559 + 2L_20347554_20347559_+ 1 1 1 0 spir FBtr0339234|FBtr0306556|FBtr0081353|FBtr0081355|FBtr0301884|FBtr0081352 20344661|20347168|20347168|20347168|20347168|20347168 20348386|20348386|20348386|20348386|20348386|20348386 2L + 20347501 20347566 3'utr spir FlyBase G5548.1 ATCGTGTTAGTCTAGTGAATAAGCAGAGGAGAATACCGAGAATTCCTGGCTGAAGCTTTGTACATT 63 20347544 0.884710222 6 58 287 0.932432432 1.838849091 0.081081081 0.142857143 0.27027027 63 5 0 69 2L:20347501-20347566 6 spir FBtr0301884|FBtr0081352|FBtr0339234|FBtr0306556|FBtr0081353|FBtr0081355 20347168|20347168|20344661|20347168|20347168|20347168 20348386|20348386|20348386|20348386|20348386|20348386 AGCTTT 6mer2-7 dme-miR-79-3p 2L + 20347513 20347563 3'utr spir FlyBase G4309.1 TAGTGAATAAGCAGAGGAGAATACCGAGAATTCCTGGCTGAAGCTTTGTAC 26 20347543 0.816031972 6 23 118 0.840909091 1.568201724 0.295454545 0.5 0.704545455 26 7 0 37 2L:20347513-20347563 6 26.5 500 FBgn0003475 1306.356667 49.26 74.34 0.020285425 0.537961835 0.356470272 10 11 10.5 0.01 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 2L 20361281 20361288 + 2L_20361281_20361288_+ 0.625363704 0.625364009 0.625363856 2.12E-07 RtGEF FBtr0302106 20360849 20361429 2L + 20361255 20361314 3'utr RtGEF FlyBase G5562.1 AAGATCAACAAACTCAACTCTGCAATTGGTGCTAAGCAGCGAACAAAGGAATCCAAAGTT 151 20361280 0.765162728 4 146 773 0.981707317 2.206825876 0.237804878 0.079470199 0.152439024 151 3 0 161 2L:20361255-20361314 8 RtGEF FBtr0302106 20360849 20361429 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 2L + 20361198 20361308 3'utr RtGEF FlyBase G4319.1 ATGTTTAAGAGAAAAGATTGATTTTTTGGTTGAACCATTGGCCACTGATTTCGTTTTAAGATCAACAAACTCAACTCTGCAATTGGTGCTAAGCAGCGAACAAAGGAATCC 109 20361280 0.963488341 8 107 556 0.967567568 2.252853031 0.210810811 0.495412844 0.702702703 109 6 0 179 2L:20361198-20361308 8 125.5 501 FBgn0015803 1414.776667 51.74333333 79.37666667 0.08870658 2.425433228 1.581069164 1 1 1 0.01 dme-miR-190-5p 6mer3-8 ACATAT 2L 20364642 20364647 + 2L_20364642_20364647_+ 1 1 1 0 RtGEF FBtr0081357|FBtr0112885|FBtr0336747|FBtr0081356 20364489|20364489|20360566|20364489 20365254|20365254|20365254|20365254 2L + 20364581 20364687 3'utr RtGEF FlyBase G5566.1 TCTTAGACACTTTTACTTTGCATCTTCGGGGGGCAGTGGGTCAATTACCAAAAAATTATCTACATATGGACTTTGTAATCGTATATGGATTGTATTTACCGAGTACT 178 20364647 0.892882906 16 178 1550 1 2.33243846 0.106976744 0.202247191 0.339534884 178 0 0 215 2L:20364581-20364687 6 RtGEF FBtr0081356|FBtr0336747|FBtr0112885|FBtr0081357 20364489|20360566|20364489|20364489 20365254|20365254|20365254|20365254 ACATAT 6mer3-8 dme-miR-190-5p 2L + 20364589 20364686 3'utr RtGEF FlyBase G4324.1 ACTTTTACTTTGCATCTTCGGGGGGCAGTGGGTCAATTACCAAAAAATTATCTACATATGGACTTTGTAATCGTATATGGATTGTATTTACCGAGTAC 134 20364647 0.880216575 11 130 1164 0.978723404 1.963787827 0.085106383 0.305970149 0.505319149 134 3 1 184 2L:20364589-20364686 6 119 502 FBgn0015803 1414.776667 51.74333333 79.37666667 0.084112216 2.29981318 1.49918112 -5 -5 -5 0.01 dme-miR-190-5p 6mer3-8 ACATAT 2L 20364991 20364996 + 2L_20364991_20364996_+ 1 1 1 0 RtGEF FBtr0081357|FBtr0112885|FBtr0336747|FBtr0081356 20364489|20364489|20360566|20364489 20365254|20365254|20365254|20365254 2L + 20364957 20365019 3'utr RtGEF FlyBase G5568.1 CACAACATGCATATTTTACTGGCATAGATTCTACACATATTAGACTTATTGTATTTTACCTAT 14 20364996 0.988941344 5 14 130 1 1.176091259 0.466666667 0.071428571 0.133333333 14 0 0 15 2L:20364957-20365019 6 RtGEF FBtr0081356|FBtr0336747|FBtr0112885|FBtr0081357 20364489|20360566|20364489|20364489 20365254|20365254|20365254|20365254 ACATAT 6mer3-8 dme-miR-190-5p 2L + 20364982 20365017 3'utr RtGEF FlyBase G4326.1 AGATTCTACACATATTAGACTTATTGTATTTTACCT 7 20364997 0.920977446 2 7 64 1 1.079181246 0.75 0.428571429 0.666666667 7 0 0 12 2L:20364982-20365017 6 9 503 FBgn0015803 1414.776667 51.74333333 79.37666667 0.006361428 0.173935451 0.113383446 -5 -6 -5.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 20365091 20365096 + 2L_20365091_20365096_+ 1 0.999999768 0.999999884 1.41E-07 RtGEF FBtr0081357|FBtr0112885|FBtr0336747|FBtr0081356 20364489|20364489|20360566|20364489 20365254|20365254|20365254|20365254 2L + 20365029 20365170 3'utr RtGEF FlyBase G5569.1 TTGCCACCATGCAACTTTTGAGAGCTGCTTGTGTAAGTTATACGAATAGATAGACCCAGTTTTGATCTTAACTTTGACGATGATTTCAAATGGACAATGCAAAATTATTAAAAATGTGCCAATACTTTAGTAAGATGCAGCA 69 20365090 0.828118523 17 64 571 0.901234568 1.562292864 0.259259259 0.15942029 0.283950617 69 7 1 73 2L:20365029-20365170 6 RtGEF FBtr0081356|FBtr0336747|FBtr0112885|FBtr0081357 20364489|20360566|20364489|20364489 20365254|20365254|20365254|20365254 TGATCT 6mer3-8 dme-bantam-3p 2L + 20365024 20365163 3'utr RtGEF FlyBase G4327.1 CGACGTTGCCACCATGCAACTTTTGAGAGCTGCTTGTGTAAGTTATACGAATAGATAGACCCAGTTTTGATCTTAACTTTGACGATGATTTCAAATGGACAATGCAAAATTATTAAAAATGTGCCAATACTTTAGTAAGA 55 20365090 0.979103256 15 53 435 0.971014493 1.826074803 0.333333333 0.181818182 0.347826087 55 2 0 67 2L:20365024-20365163 6 29 504 FBgn0015803 1414.776667 51.74333333 79.37666667 0.020497935 0.560458674 0.365346659 1 1 1 0.01 dme-miR-8-3p 6mer3-8 CAGTAT 2L 20422503 20422508 + 2L_20422503_20422508_+ 1 1 1 0 Arpc2 FBtr0346418|FBtr0081358 20422495|20422495 20423027|20423027 2L + 20422469 20422519 stop_codon Arpc2 FlyBase G5582.1 GGGGAGAACTTTCAAGCGCATCGATTGATGTGTTCAGTATATTTAGTTGTT 35 20422497 0.990742771 6 34 358 0.977272727 1.633468456 0.386363636 0.228571429 0.386363636 35 1 0 43 2L:20422469-20422519 6 Arpc2 FBtr0081358|FBtr0346418 20422495|20422495 20423027|20423027 CAGTAT 6mer3-8 dme-miR-8-3p 2L + 20422482 20422517 stop_codon Arpc2 FlyBase G4340.1 AAGCGCATCGATTGATGTGTTCAGTATATTTAGTTG 11 20422497 0.743823902 3 8 106 0.666666667 0.669006781 0.142857143 0.545454545 0.761904762 11 5 2 14 2L:20422482-20422517 6 21.5 505 FBgn0032859 3866.656667 244 375.5233333 0.005560359 0.088114754 0.057253433 6 6 6 0.01 dme-miR-995-5p 6mer3-8 AATTCG 2L 20422554 20422559 + 2L_20422554_20422559_+ 0.998972926 0.999999932 0.999486429 0.000726199 Arpc2 FBtr0346418|FBtr0081358 20422495|20422495 20423027|20423027 2L + 20422533 20422573 3'utr Arpc2 FlyBase G5583.1 AAAAAATAAATTGTGTATTAAAATTCGATATCCGAATGGTG 7 20422544 0.919751115 5 7 56 1 0.84509804 0.142857143 0 0 7 0 0 7 2L:20422533-20422573 6 Arpc2 FBtr0081358|FBtr0346418 20422495|20422495 20423027|20423027 AATTCG 6mer3-8 dme-miR-995-5p 2L + 20422531 20422573 3'utr Arpc2 FlyBase G4341.1 ACAAAAAATAAATTGTGTATTAAAATTCGATATCCGAATGGTG 5 20422544 0.978981578 4 5 31 1 0.954242509 0.111111111 0.4 0.666666667 5 0 0 9 2L:20422531-20422573 6 5.5 506 FBgn0032859 3866.656667 244 375.5233333 0.001422417 0.022540984 0.014646227 10 10 10 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA 2L 20422815 20422820 + 2L_20422815_20422820_+ 1 1 1 0 Arpc2 FBtr0346418|FBtr0081358 20422495|20422495 20423027|20423027 2L + 20422801 20422844 3'utr Arpc2 FlyBase G5587.1 AAACGTAGACTTAAGTGCAACATGAGAACTAAAACTACCATGTC 18 20422823 0.930038024 4 17 70 0.954545455 1.021189299 0.045454545 0.222222222 0.363636364 18 0 1 21 2L:20422801-20422844 6 Arpc2 FBtr0081358|FBtr0346418 20422495|20422495 20423027|20423027 GTGCAA 6mer3-8 dme-miR-92b-3p 2L + 20422796 20422842 3'utr Arpc2 FlyBase G4343.1 CAAATAAACGTAGACTTAAGTGCAACATGAGAACTAAAACTACCATG 9 20422823 0.958347781 2 9 28 1 1.079181246 0.083333333 0.333333333 0.5 9 0 0 12 2L:20422796-20422842 6 13.5 507 FBgn0032859 3866.656667 244 375.5233333 0.003491388 0.055327869 0.03594983 -8 -8 -8 0.01 dme-miR-92b-3p 6mer2-7 TGCAAT 2L 20423015 20423020 + 2L_20423015_20423020_+ 1 1 1 0 Arpc2 FBtr0346418|FBtr0081358 20422495|20422495 20423027|20423027 2L + 20422983 20423032 3'utr Arpc2 FlyBase G5589.1 AATCGGAATTAATAAAAACGAGAAAATCAAACTGCAATGTAAAATAAAAA 8 20423020 0.938144659 3 8 31 1 0.954242509 0 0.125 0.222222222 8 0 0 9 2L:20422983-20423032 6 Arpc2 FBtr0081358|FBtr0346418 20422495|20422495 20423027|20423027 TGCAAT 6mer2-7 dme-miR-92b-3p 2L + 20422983 20423034 3'utr Arpc2 FlyBase G4345.1 AATCGGAATTAATAAAAACGAGAAAATCAAACTGCAATGTAAAATAAAAAAA 11 20423009 0.847411698 2 10 36 0.923076923 1.079181246 0.538461538 0.181818182 0.307692308 11 1 0 12 2L:20422983-20423034 6 9 508 FBgn0032859 3866.656667 244 375.5233333 0.002327592 0.036885246 0.023966553 -5 6 0.5 0.01 dme-miR-184-3p 6mer2-7 CCGTCC 2L 2043247 2043252 + 2L_2043247_2043252_+ 1 1 1 0 Su(dx) FBtr0339529|FBtr0077823|FBtr0077822|FBtr0077824|FBtr0334778 2043182|2043182|2043182|2043182|2043182 2043677|2044372|2044372|2044372|2043677 2L + 2043182 2043412 stop_codon Su(dx) FlyBase G1147.1 GAGTGGCAGTCGATTTGTGGTCGGTTTGTTGATTAATGTTTAATTCCAGTTAAGCGCCTGCTTTACCGTCCCCTCCCCCTTTCCATTTGACGACCACGTTGCGTTAAATAGTTACTGTTATTATTATTATTACATACGTATGTATTACTACTGTATACTGTAAACACGAAACACACACTTCTGTCTGTCTATTCCTATGTTCGCAACCGATATCACACGAGATATTTGTTA 522 2043245 0.978794256 37 507 3452 0.972580645 2.081347308 0.022580645 0.155172414 0.288709677 522 13 4 603 2L:2043182-2043412 6 Su(dx) FBtr0077824|FBtr0334778|FBtr0077823|FBtr0077822|FBtr0339529 2043182|2043182|2043182|2043182|2043182 2044372|2043677|2044372|2044372|2043677 CCGTCC 6mer2-7 dme-miR-184-3p 2L + 2043182 2043269 stop_codon Su(dx) FlyBase G903.2 GAGTGGCAGTCGATTTGTGGTCGGTTTGTTGATTAATGTTTAATTCCAGTTAAGCGCCTGCTTTACCGTCCCCTCCCCCTTTCCATTT 243 2043245 0.697044065 14 232 1494 0.943243243 1.940765436 0.008108108 0.386831276 0.597297297 243 18 3 349 2L:2043182-2043269 6 337.5 509 FBgn0003557 1814.713333 49.05333333 75.26666667 0.185979787 6.880266377 4.484056687 2 2 2 0.01 dme-miR-283-5p 8mer-m1 TGATATTT 2L 2043558 2043565 + 2L_2043558_2043565_+ 0.555593841 0.555593841 0.555593841 0 Su(dx) FBtr0339529|FBtr0077823|FBtr0077822|FBtr0077824|FBtr0334778 2043182|2043182|2043182|2043182|2043182 2043677|2044372|2044372|2044372|2043677 2L + 2043486 2043576 3'utr Su(dx) FlyBase G1148.1 TTAGGCATAATTTATCCACTGCATAACTCTCCTGTGTAAATTTAAGACAAAGTTTGATTGATTCGCTTCTGTTGATATTTCTTACGACCAT 50 2043552 0.729324422 15 47 489 0.926470588 1.799340549 0.132352941 0.28 0.470588235 50 5 0 63 2L:2043486-2043576 8 Su(dx) FBtr0077824|FBtr0334778|FBtr0077823|FBtr0077822|FBtr0339529 2043182|2043182|2043182|2043182|2043182 2044372|2043677|2044372|2044372|2043677 TGATATTT 8mer-m1 dme-miR-283-5p 2L + 2043488 2043568 3'utr Su(dx) FlyBase G904.1 AGGCATAATTTATCCACTGCATAACTCTCCTGTGTAAATTTAAGACAAAGTTTGATTGATTCGCTTCTGTTGATATTTCTT 28 2043552 0.98874498 14 28 259 1 1.643452676 0.068181818 0.428571429 0.636363636 28 0 0 44 2L:2043488-2043568 8 19 510 FBgn0003557 1814.713333 49.05333333 75.26666667 0.010469973 0.387333515 0.252435784 6 6 6 0.01 dme-miR-263a-5p 6mer2-7 TGCCAT 2L 20443003 20443008 + 2L_20443003_20443008_+ 0.999996154 0.999957577 0.999976866 2.73E-05 CG31688 FBtr0330661|FBtr0330203|FBtr0330204|FBtr0308895|FBtr0273378 20441856|20441889|20441889|20441856|20441856 20447905|20443944|20443944|20444823|20443944 2L + 20442982 20443028 3'utr CG31688 FlyBase G5593.1 CTTTGCCGCCACATACCGCACTGCCATGGTCGAGAGCAGCTCGCACG 21 20443008 0.887047371 2 19 56 0.956521739 1.342422681 0.130434783 0.095238095 0.173913043 21 1 0 22 2L:20442982-20443028 6 CG31688 FBtr0308895|FBtr0330204|FBtr0330203|FBtr0330661|FBtr0273378 20441856|20441889|20441889|20441856|20441856 20444823|20443944|20443944|20447905|20443944 TGCCAT 6mer2-7 dme-miR-263a-5p 2L + 20442985 20443024 3'utr CG31688 FlyBase G4348.1 TGCCGCCACATACCGCACTGCCATGGTCGAGAGCAGCTCG 9 20443008 0.898508352 2 8 27 0.8 1.079181246 0.2 0.555555556 0.733333333 9 3 0 12 2L:20442985-20443024 6 14.5 511 FBgn0263355 715.8866667 19.27333333 29.67 0.020254603 0.752334832 0.488709134 -5 -5 -5 0.01 dme-miR-92b-3p 6mer2-7 TGCAAT 2L 2044324 2044329 + 2L_2044324_2044329_+ 0.999998255 0.999973368 0.999985811 1.76E-05 Su(dx) FBtr0077823|FBtr0077822|FBtr0077824 2043182|2043182|2043182 2044372|2044372|2044372 2L + 2044298 2044382 3'utr Su(dx) FlyBase G1151.1 TATTAAATAGATTTTATTTAGTTTAATGCAATGTGTACTGTATTATATAAAATAAATGCAAAATTATTTAGTGATACACGGCCGA 23 2044331 0.976351797 11 20 237 0.928571429 1.414973348 0.285714286 0.217391304 0.357142857 23 2 0 26 2L:2044298-2044382 6 Su(dx) FBtr0077824|FBtr0077823|FBtr0077822 2043182|2043182|2043182 2044372|2044372|2044372 TGCAAT 6mer2-7 dme-miR-92b-3p 2L + 2044313 2044355 3'utr Su(dx) FlyBase G905.1 ATTTAGTTTAATGCAATGTGTACTGTATTATATAAAATAAATG 14 2044330 0.74261912 7 12 150 0.913043478 1.322219295 0.173913043 0.571428571 0.739130435 14 2 0 21 2L:2044313-2044355 6 15 512 FBgn0003557 1814.713333 49.05333333 75.26666667 0.008265768 0.305789617 0.199291408 -7 -6 -6.5 0.01 dme-miR-263a-5p 6mer2-7 TGCCAT 2L 20452121 20452126 + 2L_20452121_20452126_+ 0.99999872 1 0.99999936 9.19E-07 CG31687 FBtr0332968|FBtr0302224 20451413|20451413 20456978|20453935 2L + 20452088 20452143 3'utr CG31687 FlyBase G5603.1 GGAGACAAACTACTTTGCCGCCACATACCGCACTGCCATGGTCGAGAGCAGCTCGC 23 20452126 0.759484322 3 22 71 0.964285714 1.431363764 0.25 0.173913043 0.321428571 23 1 0 27 2L:20452088-20452143 6 CG31687 FBtr0302224|FBtr0332968 20451413|20451413 20453935|20456978 TGCCAT 6mer2-7 dme-miR-263a-5p 2L + 20452102 20452145 3'utr CG31687 FlyBase G4353.1 TTGCCGCCACATACCGCACTGCCATGGTCGAGAGCAGCTCGCAC 16 20452126 0.754764766 2 15 44 0.962962963 1.414973348 0.296296296 0.4375 0.666666667 16 1 0 26 2L:20452102-20452145 6 18.5 513 FBgn0051687 1365.03 44.63666667 68.55 0.013552816 0.414457471 0.269876003 -5 -5 -5 0.01 dme-miR-263a-5p 6mer2-7 TGCCAT 2L 20647248 20647253 + 2L_20647248_20647253_+ 0.570826529 0.595995769 0.583411149 0.017797383 CG2608 FBtr0081384 20646861 20647381 2L + 20647182 20647267 3'utr CG2608 FlyBase G5619.1 TGACAGCCTTGTATCGAGTGAGATTAGTTTTGTTGATTCAGATTAGTCACATGAAAGGTCTCTGACTGCCATGTAAATCATAAGTA 14 20647244 0.984343313 6 12 101 0.882352941 0.875061263 0.176470588 0.214285714 0.352941176 14 1 1 15 2L:20647182-20647267 6 CG2608 FBtr0081384 20646861 20647381 TGCCAT 6mer2-7 dme-miR-263a-5p 2L + 20647221 20647268 3'utr CG2608 FlyBase G4365.1 AGATTAGTCACATGAAAGGTCTCTGACTGCCATGTAAATCATAAGTAA 9 20647253 0.956937515 4 9 57 1 1.230448921 0.235294118 0.777777778 0.882352941 9 0 0 17 2L:20647221-20647268 6 8.5 514 FBgn0032870 618.86 51.52 79.05666667 0.013734932 0.164984472 0.107517814 4 -5 -0.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2L 20650744 20650749 + 2L_20650744_20650749_+ 1 1 1 0 CG2611 FBtr0081387 20650724 20650898 2L + 20650736 20650765 3'utr CG2611 FlyBase G5625.1 CCAAAGACACCAAATGTTTCGTCAAATAGA 8 20650750 0.971450825 3 7 40 0.9 0.954242509 0 0.25 0.4 8 1 0 9 2L:20650736-20650765 6 CG2611 FBtr0081387 20650724 20650898 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L + 20650738 20650768 3'utr CG2611 FlyBase G4371.1 AAAGACACCAAATGTTTCGTCAAATAGAGTT 6 20650752 0.967652711 3 5 33 1 1 0 0.5 0.7 6 0 0 10 2L:20650738-20650768 6 6.5 515 FBgn0032871 63.36 12.95666667 19.59 0.102588384 0.501672241 0.33180194 -6 -8 -7 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2L 20730913 20730919 - 2L_20730913_20730919_- 0.521223855 0.521223855 0.521223855 0 CG9318 FBtr0081393|FBtr0335149 20730643|20730414 20730999|20730999 2L - 20730809 20730974 3'utr CG9318 FlyBase G12008.1 TGCGAATGTATTTTTGTATGTGTAGCCACAAATTTACACTTAAGCCTAATGTGTGTGTGATTTCTGCGCTGTGCGCCCGGCACAGACAGTTTTCTGTTTACTATAATTACGATTGATATGTGTATAATAACATATGTTTGTATCAGGCAAGGAACAGTGGAGTAAC 93 20730913 0.985962272 25 92 775 0.990740741 2.029383778 0.231481481 0.139784946 0.259259259 93 1 0 107 2L:20730809-20730974 7 CG9318 FBtr0081393|FBtr0335149 20730643|20730414 20730999|20730999 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 20730886 20730957 3'utr CG9318 FlyBase G9212.1 ATGTGTAGCCACAAATTTACACTTAAGCCTAATGTGTGTGTGATTTCTGCGCTGTGCGCCCGGCACAGACAG 67 20730913 0.987733209 12 65 588 0.962264151 2.008600172 0.160377358 0.432835821 0.641509434 67 4 0 102 2L:20730886-20730957 7 65 516 FBgn0032880 1856.426667 79.74 121.9 0.035013503 0.815149235 0.533223954 -6 -6 -6 0.01 dme-miR-278-3p 6mer3-8 CCCACC 2L 20738935 20738940 + 2L_20738935_20738940_+ 1 1 1 0 Fs(2)Ket FBtr0305587|FBtr0305586|FBtr0305585|FBtr0081392|FBtr0305584 20738901|20738901|20738901|20738901|20738901 20750941|20750941|20750941|20739764|20739764 2L + 20738895 20738969 stop_codon Fs(2)Ket FlyBase G5668.1 CGCAGTAGGCCACCTGCTAGAGGTTAATGTTTCTTCGCTTCCCACCAGACCCTCAAGATTGTGTGTAATGCAGTG 34 20738953 0.920342401 8 33 254 0.975609756 1.602059991 0.463414634 0.176470588 0.317073171 34 1 0 40 2L:20738895-20738969 6 Fs(2)Ket FBtr0305584|FBtr0081392|FBtr0305585|FBtr0305586|FBtr0305587 20738901|20738901|20738901|20738901|20738901 20739764|20739764|20750941|20750941|20750941 CCCACC 6mer3-8 dme-miR-278-3p 2L + 20738908 20738973 3'utr Fs(2)Ket FlyBase G4399.1 CTGCTAGAGGTTAATGTTTCTTCGCTTCCCACCAGACCCTCAAGATTGTGTGTAATGCAGTGAAAG 24 20738953 0.757483815 6 23 158 0.96969697 1.505149978 0.121212121 0.291666667 0.484848485 24 1 0 32 2L:20738908-20738973 6 19 517 FBgn0262743 4510.123333 82.11666667 125.5566667 0.004212745 0.231378121 0.151326094 -18 -18 -18 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2L 20739566 20739571 + 2L_20739566_20739571_+ 1 1 1 0 Fs(2)Ket FBtr0305586|FBtr0305585|FBtr0081392|FBtr0305584 20738901|20738901|20738901|20738901 20750941|20750941|20739764|20739764 2L + 20739516 20739601 3'utr Fs(2)Ket FlyBase G5670.1 AGGCTACGGCAACCAGCGCTTTGTTAACCCGATTTTAAGCATTACCAAAAACCAAACGTTGCTGTTACTCAAATTATGTAAAATTC 33 20739575 0.965016189 7 33 180 1 1.653212514 0 0.242424242 0.444444444 33 0 0 45 2L:20739516-20739601 6 Fs(2)Ket FBtr0305584|FBtr0081392|FBtr0305585|FBtr0305586 20738901|20738901|20738901|20738901 20739764|20739764|20750941|20750941 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L + 20739522 20739603 3'utr Fs(2)Ket FlyBase G4401.1 CGGCAACCAGCGCTTTGTTAACCCGATTTTAAGCATTACCAAAAACCAAACGTTGCTGTTACTCAAATTATGTAAAATTCAC 24 20739575 0.978294085 8 20 133 0.909090909 1.477121255 0.03030303 0.333333333 0.515151515 24 3 0 30 2L:20739522-20739603 6 23.5 518 FBgn0262743 4510.123333 82.11666667 125.5566667 0.005210501 0.286178202 0.187166485 -9 -9 -9 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 20740044 20740050 + 2L_20740044_20740050_+ 0.801965702 0.801943558 0.80195463 1.56E-05 Fs(2)Ket FBtr0305586|FBtr0305586|FBtr0305586|FBtr0305585|FBtr0305585|FBtr0305585 20738901|20738901|20738901|20738901|20738901|20738901 20750941|20750941|20750941|20750941|20750941|20750941 2L + 20739947 20740111 5'utr-coding Fs(2)Ket FlyBase G5673.1 TATGTACGTGGTATTTTGATTGCGACAAACCCCCGAAATGTTTGGAAACGGATGAGGATTCCCCCTTTCTGTGGCGCGCGTGTGCATCGGCGTGTTGTGTGATATTATGGATTAAGCGTAAGAACTTTTCTAGTGAAACGAATGATTTTAGACCTAAGCAAAACC 244 20740042 0.777988656 33 226 1966 0.929078014 2.117271296 0.460992908 0.118852459 0.237588652 244 19 1 262 2L:20739947-20740111 7 Fs(2)Ket FBtr0305585|FBtr0305585|FBtr0305585|FBtr0305586|FBtr0305586|FBtr0305586 20738901|20738901|20738901|20738901|20738901|20738901 20750941|20750941|20750941|20750941|20750941|20750941 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 20739895 20740106 5'utr-coding Fs(2)Ket FlyBase G4403.2 TACCCCTATGCCAATAGTTATGCTGTGATGGATGCTTGAGAGGAACTATGTCTATGTACGTGGTATTTTGATTGCGACAAACCCCCGAAATGTTTGGAAACGGATGAGGATTCCCCCTTTCTGTGGCGCGCGTGTGCATCGGCGTGTTGTGTGATATTATGGATTAAGCGTAAGAACTTTTCTAGTGAAACGAATGATTTTAGACCTAAGCA 159 20740042 0.986032248 32 146 1331 0.927419355 1.759667845 0.584677419 0.408805031 0.620967742 159 15 3 230 2L:20739895-20740106 7 114.5 519 FBgn0262743 4510.123333 82.11666667 125.5566667 0.025387332 1.394357621 0.911938832 2 2 2 0.01 dme-miR-932-5p 6mer3-8 GGAATT 2L 20749193 20749198 + 2L_20749193_20749198_+ 0.591720885 0.591720885 0.591720885 0 Fs(2)Ket FBtr0305586 20738901 20750941 2L + 20749151 20749217 3'utr Fs(2)Ket FlyBase G5679.1 AAGGGAACATTTGTTTTATCAGATTCGAACATATCAGAAATTGGAATTTGAAATGGCAACTTGGAGC 6 20749196 0.974645763 5 6 42 1 0.903089987 0.625 0.166666667 0.375 6 0 0 8 2L:20749151-20749217 6 Fs(2)Ket FBtr0305586 20738901 20750941 GGAATT 6mer3-8 dme-miR-932-5p 2L + 20749160 20749224 3'utr Fs(2)Ket FlyBase G4410.1 TTTGTTTTATCAGATTCGAACATATCAGAAATTGGAATTTGAAATGGCAACTTGGAGCACTTGAT 5 20749192 0.988272988 4 4 41 0.8 0.903089987 0.5 0.8 0.9 5 2 0 8 2L:20749160-20749224 6 4 520 FBgn0262743 4510.123333 82.11666667 125.5566667 0.000886894 0.048711183 0.031858125 -3 1 -1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 20749805 20749810 + 2L_20749805_20749810_+ 1 1 1 0 Fs(2)Ket FBtr0305587|FBtr0305587|FBtr0305587|FBtr0305586|FBtr0305586|FBtr0305586|FBtr0305585|FBtr0305585|FBtr0305585 20738901|20738901|20738901|20738901|20738901|20738901|20738901|20738901|20738901 20750941|20750941|20750941|20750941|20750941|20750941|20750941|20750941|20750941 2L + 20749786 20749818 3'utr Fs(2)Ket FlyBase G5682.1 AAGAGTAGTGTGTTTGGAACTGTGACTGAGTAA 8 20749807 0.708485111 4 7 57 0.909090909 1 0 0.25 0.454545455 8 1 0 10 2L:20749786-20749818 6 Fs(2)Ket FBtr0305585|FBtr0305585|FBtr0305585|FBtr0305586|FBtr0305586|FBtr0305586|FBtr0305587|FBtr0305587|FBtr0305587 20738901|20738901|20738901|20738901|20738901|20738901|20738901|20738901|20738901 20750941|20750941|20750941|20750941|20750941|20750941|20750941|20750941|20750941 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 20749795 20749824 3'utr Fs(2)Ket FlyBase G4414.1 GTGTTTGGAACTGTGACTGAGTAAATTTGT 8 20749801 0.630032987 5 8 55 1 1 0 0.25 0.4 8 0 0 10 2L:20749795-20749824 6 8 521 FBgn0262743 4510.123333 82.11666667 125.5566667 0.001773787 0.097422367 0.06371625 -2 4 1 0.01 dme-miR-308-3p 8mer-m1 CTGTGATT 2L 20750127 20750134 + 2L_20750127_20750134_+ 0.385560641 0.385560641 0.385560641 0 Fs(2)Ket FBtr0305587|FBtr0305586|FBtr0305585 20738901|20738901|20738901 20750941|20750941|20750941 2L + 20750104 20750186 3'utr Fs(2)Ket FlyBase G5683.1 TAAAAACACAACTGTAACATTGCCTGTGATTCATTCGATCATCTGTGTGTGGAGTGTACGCTGTGTGAAAGACTTGTGTGGAT 58 20750124 0.98960313 8 51 500 0.848484848 1.271066772 0.03030303 0.120689655 0.227272727 58 8 2 56 2L:20750104-20750186 8 Fs(2)Ket FBtr0305585|FBtr0305586|FBtr0305587 20738901|20738901|20738901 20750941|20750941|20750941 CTGTGATT 8mer-m1 dme-miR-308-3p 2L + 20750108 20750145 3'utr Fs(2)Ket FlyBase G4416.1 AACACAACTGTAACATTGCCTGTGATTCATTCGATCAT 31 20750124 0.774842722 7 29 254 0.9375 1.653212514 0.0625 0.483870968 0.666666667 31 3 0 45 2L:20750108-20750145 8 43.5 522 FBgn0262743 4510.123333 82.11666667 125.5566667 0.009644969 0.529734118 0.346457111 3 3 3 0.01 dme-miR-190-5p 6mer3-8 ACATAT 2L 20750332 20750337 + 2L_20750332_20750337_+ 1 1 1 0 Fs(2)Ket FBtr0305587|FBtr0305586|FBtr0305585 20738901|20738901|20738901 20750941|20750941|20750941 2L + 20750322 20750384 3'utr Fs(2)Ket FlyBase G5684.1 GAGAAACGTAACATATGGTACTGATTTTTATACTGAGAACTGAGACTTACTATATATACATAC 41 20750361 0.936290411 10 41 332 1 1.633468456 0 0.024390244 0.069767442 41 0 0 43 2L:20750322-20750384 6 Fs(2)Ket FBtr0305585|FBtr0305586|FBtr0305587 20738901|20738901|20738901 20750941|20750941|20750941 ACATAT 6mer3-8 dme-miR-190-5p 2L + 20750322 20750376 3'utr Fs(2)Ket FlyBase G4417.1 GAGAAACGTAACATATGGTACTGATTTTTATACTGAGAACTGAGACTTACTATAT 8 20750337 0.901373174 4 8 54 1 1.230448921 0 0.5 0.764705882 8 0 0 17 2L:20750322-20750376 6 10 523 FBgn0262743 4510.123333 82.11666667 125.5566667 0.002217234 0.121777958 0.079645313 -29 -5 -17 0.01 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 2L 20788624 20788629 + 2L_20788624_20788629_+ 1 1 1 0 Pomp FBtr0081414 20788537 20789098 2L + 20788551 20788666 3'utr Pomp FlyBase G5710.1 GAAGTTGCTAAATGCCTGGCATTCAGCCTTTAAACTCTAAGACACTCTTAAGATCAGCAAATAAAATATATTTTGGTGCGACCAGCTAGAGGTAAACAAAATTCACCATTTCTTTG 42 20788623 0.706173228 19 39 254 0.886792453 1.070037867 0.113207547 0.238095238 0.396226415 42 3 3 47 2L:20788551-20788666 6 Pomp FBtr0081414 20788537 20789098 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 2L + 20788550 20788644 3'utr Pomp FlyBase G4437.1 TGAAGTTGCTAAATGCCTGGCATTCAGCCTTTAAACTCTAAGACACTCTTAAGATCAGCAAATAAAATATATTTTGGTGCGACCAGCTAGAGGTA 21 20788624 0.776688047 8 20 118 0.967741935 1.176091259 0.258064516 0.428571429 0.612903226 21 0 1 30 2L:20788550-20788644 6 13.5 524 FBgn0032884 886.4133333 100.35 153.2666667 0.015229915 0.134529148 0.088081775 1 0 0.5 0.01 dme-miR-999-3p 6mer2-7 GTTAAC 2L 20813823 20813828 + 2L_20813823_20813828_+ 1 0.999976445 0.999988222 1.67E-05 CG9328 FBtr0081416 20813711 20814331 2L + 20813656 20814022 stop_codon CG9328 FlyBase G5718.1 AATCCCGAGTATCTGAACGTGCGGGCCAAGCTGCGCACGGCGCACGCCAACAATTAAGGAGCAGCCCACTCGGATACCCCTCATCCTGTAATCCTCAGCCTATTTAATGTTTAGTTTTAGTAAGAGACCTAACCAAATTATGTGTAAGGAAACCATGTGTTTTATATGTTAACTTTGTGAGCGGTTTTCATTTTGATATTATGCAAAACTAGAGTTGATTATTATAATTAAAAATGTACACCTAGACTAAGCCATTTACTTGTTTAGTTTGTTAGTCCTTATCTCTAATCTAAGTTGAAGCTTTCTTGCGCTAAATTCGTTGTGTATAAACCAAGTGTATAAAGTTTTAGTTTCTAAAAGGACCCCA 257 20813817 0.987709092 60 244 2185 0.950331126 1.980760642 0.086092715 0.147859922 0.274834437 257 13 2 287 2L:20813656-20814022 6 CG9328 FBtr0081415|FBtr0081416 20813711|20813711 20814030|20814331 GTTAAC 6mer2-7 dme-miR-999-3p 2L + 20813711 20813908 stop_codon CG9328 FlyBase G4442.1 AAGGAGCAGCCCACTCGGATACCCCTCATCCTGTAATCCTCAGCCTATTTAATGTTTAGTTTTAGTAAGAGACCTAACCAAATTATGTGTAAGGAAACCATGTGTTTTATATGTTAACTTTGTGAGCGGTTTTCATTTTGATATTATGCAAAACTAGAGTTGATTATTATAATTAAAAATGTACACCTAGACTAAGCC 99 20813817 0.974532774 32 95 806 0.967948718 1.576916956 0.051282051 0.404040404 0.621794872 99 2 3 151 2L:20813711-20813908 6 26.5 525 FBgn0032886 2087.65 162.9466667 249.96 0.012693699 0.162629899 0.106016963 6 6 6 0.01 dme-miR-31a-5p 6mer3-8 TCTTGC 2L 20813959 20813964 + 2L_20813959_20813964_+ 1 0.997361755 0.998680878 0.001865489 CG9328 FBtr0081416 20813711 20814331 2L + 20813656 20814022 stop_codon CG9328 FlyBase G5718.1 AATCCCGAGTATCTGAACGTGCGGGCCAAGCTGCGCACGGCGCACGCCAACAATTAAGGAGCAGCCCACTCGGATACCCCTCATCCTGTAATCCTCAGCCTATTTAATGTTTAGTTTTAGTAAGAGACCTAACCAAATTATGTGTAAGGAAACCATGTGTTTTATATGTTAACTTTGTGAGCGGTTTTCATTTTGATATTATGCAAAACTAGAGTTGATTATTATAATTAAAAATGTACACCTAGACTAAGCCATTTACTTGTTTAGTTTGTTAGTCCTTATCTCTAATCTAAGTTGAAGCTTTCTTGCGCTAAATTCGTTGTGTATAAACCAAGTGTATAAAGTTTTAGTTTCTAAAAGGACCCCA 257 20813961 0.987709092 60 244 2185 0.950331126 1.980760642 0.086092715 0.147859922 0.274834437 257 13 2 287 2L:20813656-20814022 6 CG9328 FBtr0081415|FBtr0081416 20813711|20813711 20814030|20814331 TCTTGC 6mer3-8 dme-miR-31a-5p 2L + 20813915 20813988 5'utr CG9328 FlyBase G4443.1 TTGTTTAGTTTGTTAGTCCTTATCTCTAATCTAAGTTGAAGCTTTCTTGCGCTAAATTCGTTGTGTATAAACCA 51 20813961 0.706274107 9 50 466 1 1.77815125 0.166666667 0.18 0.316666667 50 0 0 60 2L:20813915-20813988 6 56 526 FBgn0032886 2087.65 162.9466667 249.96 0.02682442 0.343670731 0.224035846 -2 -2 -2 0.01 dme-miR-283-5p 7mer-m1 GATATTT 2L 20814189 20814195 + 2L_20814189_20814195_+ 0.765586663 0.765586663 0.765586663 0 CG9328 FBtr0081416 20813711 20814331 2L + 20814089 20814216 3'utr CG9328 FlyBase G5719.2 ATTGTATATGTATATCTAAAGATTAGTGAGACCGAAAATGCTGTAAACAGGGCAATGTGTTAGAAAATAAGACAGAGAGACAGACAGAACTTGGGCGGAAGATATTTGATCTACATAGAACAACTATT 891 20814179 0.847840071 22 859 2683 0.969756098 2.152288344 0.269268293 0.126823793 0.24097561 891 25 6 994 2L:20814089-20814216 7 CG9328 FBtr0081416 20813711 20814331 GATATTT 7mer-m1 dme-miR-283-5p 2L + 20814091 20814216 3'utr CG9328 FlyBase G4444.2 TGTATATGTATATCTAAAGATTAGTGAGACCGAAAATGCTGTAAACAGGGCAATGTGTTAGAAAATAAGACAGAGAGACAGACAGAACTTGGGCGGAAGATATTTGATCTACATAGAACAACTATT 588 20814179 0.841080702 17 560 1484 0.971367975 2.058805487 0.300106045 0.430272109 0.644750795 588 20 7 916 2L:20814091-20814216 7 223.5 527 FBgn0032886 2087.65 162.9466667 249.96 0.107058175 1.371614434 0.894143063 10 10 10 0.01 dme-miR-283-5p 6mer2-7 GATATT 2L 20871592 20871597 - 2L_20871592_20871597_- 1 1 1 0 sky FBtr0081443|FBtr0330257|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081447|FBtr0081444|FBtr0330256|FBtr0081441|FBtr0081442|FBtr0081446 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 2L - 20871578 20871626 3'utr sky FlyBase G12035.1 TGTTTGACGATCAAGAAATCAATGGACTAGATATTGAAACAGAAATTGT 77 20871604 0.884704138 3 77 307 1 1.977723605 0.115789474 0.181818182 0.336842105 77 0 0 95 2L:20871578-20871626 6 sky FBtr0081442|FBtr0081447|FBtr0081446|FBtr0330256|FBtr0081444|FBtr0081441|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081443|FBtr0330257 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 GATATT 6mer2-7 dme-miR-283-5p 2L - 20871555 20871622 3'utr sky FlyBase G9230.1 TGACGATCAAGAAATCAATGGACTAGATATTGAAACAGAAATTGTGTGTATCGATTTGAAAGTGTTAT 87 20871604 0.94080225 5 87 350 1 2.093421685 0.016129032 0.333333333 0.532258065 87 0 0 124 2L:20871555-20871622 6 81.5 528 FBgn0032901 1773.08 43.72 66.94 0.045965213 1.864135407 1.217508216 7 7 7 0.01 dme-miR-932-5p 6mer2-7 GAATTG 2L 20871824 20871829 - 2L_20871824_20871829_- 1 1 1 0 sky FBtr0081443|FBtr0330257|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081447|FBtr0081444|FBtr0330256|FBtr0081441|FBtr0081442|FBtr0081446 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 2L - 20871789 20871845 3'utr sky FlyBase G12037.1 AAATTGTTTTCTATCTGAATTGTTCTCAATGTGTAGTTTATATACAATATCTTGATA 58 20871826 0.98340103 9 57 639 0.987179487 1.886490725 0.115384615 0.293103448 0.474358974 58 1 0 77 2L:20871789-20871845 6 sky FBtr0081442|FBtr0081447|FBtr0081446|FBtr0330256|FBtr0081444|FBtr0081441|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081443|FBtr0330257 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 GAATTG 6mer2-7 dme-miR-932-5p 2L - 20871786 20871840 3'utr sky FlyBase G9231.1 GTTTTCTATCTGAATTGTTCTCAATGTGTAGTTTATATACAATATCTTGATAAAT 34 20871826 0.990208216 6 34 344 1 1.755874856 0.105263158 0.411764706 0.649122807 34 0 0 57 2L:20871786-20871840 6 43 529 FBgn0032901 1773.08 43.72 66.94 0.024251585 0.983531565 0.642366298 -3 -3 -3 0.01 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 20872586 20872593 - 2L_20872586_20872593_- 0.63113665 0.63113665 0.63113665 0 sky FBtr0081443|FBtr0330257|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081447|FBtr0081444|FBtr0330256|FBtr0081441|FBtr0081442|FBtr0081446 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 2L - 20872530 20872667 3'utr sky FlyBase G12041.1 ATTTTCAATACCAACGAAATTCTTTGCTCACCTCCACCTAAAAACTGCACGTACACAAAATTTTTGCACACTTTTCTAGTCAATTTTTATGTTTTACAAAAATAACATGGTGTGTCTCCTCCCATTTCCCTCTGGACG 186 20872594 0.914851519 22 176 1855 0.948717949 1.86923172 0.11965812 0.188172043 0.354700855 186 10 2 222 2L:20872530-20872667 8 sky FBtr0081442|FBtr0081447|FBtr0081446|FBtr0330256|FBtr0081444|FBtr0081441|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081443|FBtr0330257 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 20872526 20872625 3'utr sky FlyBase G9235.1 AACTGCACGTACACAAAATTTTTGCACACTTTTCTAGTCAATTTTTATGTTTTACAAAAATAACATGGTGTGTCTCCTCCCATTTCCCTCTGGACGAACA 138 20872594 0.990473723 17 133 1362 0.974358974 2.278753601 0.082051282 0.297101449 0.502564103 138 5 0 190 2L:20872526-20872625 8 141.5 530 FBgn0032901 1773.08 43.72 66.94 0.079804634 3.236505032 2.113833284 1 1 1 0.01 dme-bantam-3p 8mer-A1 TGATCTCA 2L 20872779 20872786 - 2L_20872779_20872786_- 0.631136385 0.631136385 0.631136385 0 sky FBtr0081443|FBtr0330257|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081447|FBtr0081444|FBtr0330256|FBtr0081441|FBtr0081442|FBtr0081446 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 2L - 20872764 20872844 3'utr sky FlyBase G12043.1 AAATAAGTTGAAGGAACGATTGGGCAGTGGAGAGCTGCCATGTGCCACCATGTGCAATTGATCTCAAAACGAAAAACGAAA 1074 20872787 0.830645749 11 1049 5578 0.979405034 1.932473765 0.439359268 0.175977654 0.324942792 1074 13 14 1284 2L:20872764-20872844 8 sky FBtr0081442|FBtr0081447|FBtr0081446|FBtr0330256|FBtr0081444|FBtr0081441|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081443|FBtr0330257 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 TGATCTCA 8mer-A1 dme-bantam-3p 2L - 20872766 20872872 3'utr sky FlyBase G9236.1 GCGGAATTTGTAGTCGGTTCAAAGTCCAAAATAAGTTGAAGGAACGATTGGGCAGTGGAGAGCTGCCATGTGCCACCATGTGCAATTGATCTCAAAACGAAAAACGA 647 20872787 0.963957029 13 634 3280 0.97718254 2.090346244 0.446428571 0.404945904 0.618055556 647 16 7 985 2L:20872766-20872872 8 842 531 FBgn0032901 1773.08 43.72 66.94 0.47487987 19.2589204 12.57842844 1 1 1 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 2L 20873124 20873129 - 2L_20873124_20873129_- 1 1 1 0 sky FBtr0081443|FBtr0330257|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081445|FBtr0081447|FBtr0081444|FBtr0330256|FBtr0081441|FBtr0081442|FBtr0081446 20871333|20871333|20871333|20871333|20871333|20872993|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 2L - 20873090 20873159 3'utr sky FlyBase G12045.1 TTTTTCTTTCTGTAAACCAAATTTACTGACTTGACTGAATTCGTTATTAATGTTATTAATATTATTATTG 97 20873132 0.983889909 10 91 844 0.933333333 1.748188027 0.041666667 0.18556701 0.341666667 97 7 1 112 2L:20873090-20873159 6 sky FBtr0081442|FBtr0081447|FBtr0081446|FBtr0330256|FBtr0081444|FBtr0081441|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081445|FBtr0081443|FBtr0330257 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20872993|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 TTGACT 6mer3-8 dme-miR-1012-3p 2L - 20873104 20873177 3'utr sky FlyBase G9237.1 TTAATTTATGAAACTGTATTTTTCTTTCTGTAAACCAAATTTACTGACTTGACTGAATTCGTTATTAATGTTAT 64 20873132 0.66544607 13 62 539 0.975 1.414973348 0.0125 0.21875 0.375 64 0 2 78 2L:20873104-20873177 6 76 532 FBgn0032901 1773.08 43.72 66.94 0.042863266 1.738334858 1.135345085 3 3 3 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 20873435 20873440 - 2L_20873435_20873440_- 0.755363009 0.755363009 0.755363009 0 sky FBtr0081443|FBtr0081443|FBtr0081443|FBtr0330257|FBtr0330257|FBtr0330257|FBtr0301961|FBtr0301961|FBtr0301961|FBtr0330255|FBtr0330255|FBtr0330255|FBtr0081440|FBtr0081440|FBtr0081440|FBtr0081445|FBtr0081445|FBtr0081445|FBtr0081447|FBtr0081447|FBtr0081447|FBtr0081444|FBtr0081444|FBtr0081444|FBtr0330256|FBtr0330256|FBtr0330256|FBtr0081441|FBtr0081441|FBtr0081441|FBtr0081442|FBtr0081442|FBtr0081442|FBtr0081446|FBtr0081446|FBtr0081446 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20872993|20872993|20872993|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 2L - 20873407 20873569 3'utr sky FlyBase G12049.1 AAGCTTATTTATAAAAATGTATCGAAAGTGGCCAAGCAGCAGTAAATGCTGCCGTCGTCGTGTTAATGTTAAATGTTAATGAAAAAATGCAAAGCTAAAACAAATTATATATTATATAATGGAAATACTCTGTGAGTTCATGTTTCAAAACGCAAAGCTTTGA 76 20873433 0.988552082 15 67 538 0.869047619 1.562292864 0.083333333 0.105263158 0.19047619 76 10 1 73 2L:20873407-20873569 6 sky FBtr0081442|FBtr0081442|FBtr0081442|FBtr0081447|FBtr0081447|FBtr0081447|FBtr0081446|FBtr0081446|FBtr0081446|FBtr0330256|FBtr0330256|FBtr0330256|FBtr0081444|FBtr0081444|FBtr0081444|FBtr0081441|FBtr0081441|FBtr0081441|FBtr0301961|FBtr0301961|FBtr0301961|FBtr0330255|FBtr0330255|FBtr0330255|FBtr0081440|FBtr0081440|FBtr0081440|FBtr0081445|FBtr0081445|FBtr0081445|FBtr0081443|FBtr0081443|FBtr0081443|FBtr0330257|FBtr0330257|FBtr0330257 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20872993|20872993|20872993|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 20873335 20873459 3'utr sky FlyBase G9240.1 ATTATATAATGGAAATACTCTGTGAGTTCATGTTTCAAAACGCAAAGCTTTGAAATTACAATACCCTAGTTGTTATAACCCCTTTACATACGTATATACATGATATCTATACAAACAAGTATATA 50 20873433 0.98032649 14 47 335 0.956521739 1.51851394 0.144927536 0.3 0.492753623 50 2 1 66 2L:20873335-20873459 6 47.5 533 FBgn0032901 1773.08 43.72 66.94 0.026789541 1.086459286 0.709590678 -7 -7 -7 0.01 dme-miR-283-5p 6mer2-7 GATATT 2L 20873720 20873725 - 2L_20873720_20873725_- 1 1 1 0 sky FBtr0081443|FBtr0330257|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081445|FBtr0081447|FBtr0081444|FBtr0330256|FBtr0081441|FBtr0081442|FBtr0081446 20871333|20871333|20871333|20871333|20871333|20872993|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 2L - 20873676 20873778 stop_codon sky FlyBase G12050.1 CTGGAAGTCTACGGATTCGTGGGCATCTAAAAACCTTCTTTCTTAGTCTGACCGATATTGCCCGCCGATGATCAAGTGCTCAGCAAAACTGCTCGACGTTCCC 25 20873736 0.978455624 13 25 169 1 1.505149978 0.03125 0.24 0.40625 25 0 0 32 2L:20873676-20873778 6 sky FBtr0081442|FBtr0081447|FBtr0081446|FBtr0330256|FBtr0081444|FBtr0081441|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081445|FBtr0081443|FBtr0330257 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20872993|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 GATATT 6mer2-7 dme-miR-283-5p 2L - 20873674 20873748 3'utr sky FlyBase G9243.1 AAACCTTCTTTCTTAGTCTGACCGATATTGCCCGCCGATGATCAAGTGCTCAGCAAAACTGCTCGACGTTCCCCC 13 20873735 0.830357217 8 12 70 0.952380952 1.301029996 0.19047619 0.384615385 0.619047619 13 1 0 20 2L:20873674-20873748 6 14.5 534 FBgn0032901 1773.08 43.72 66.94 0.00817786 0.331655993 0.216611891 11 10 10.5 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2L 20919164 20919169 - 2L_20919164_20919169_- 1 1 1 0 Mtp FBtr0081439 20919092 20919238 2L - 20919125 20919222 3'utr Mtp FlyBase G12065.1 TATTGGAGATTCCTTGCATAAAAACTATATTTCTATGTGAAAACTCAGAGATTAAGACTCGATATAGTTGTAAACTTAAACGAACAAAGACCATTTAA 50 20919171 0.982220912 9 46 337 0.93220339 1.439332694 0.271186441 0.18 0.305084746 50 3 1 55 2L:20919125-20919222 6 Mtp FBtr0081439 20919092 20919238 AAGACT 6mer3-8 dme-miR-14-3p 2L - 20919131 20919198 3'utr Mtp FlyBase G9252.1 CTATATTTCTATGTGAAAACTCAGAGATTAAGACTCGATATAGTTGTAAACTTAAACGAACAAAGACC 22 20919171 0.977658197 5 21 141 0.965517241 1.447158031 0.413793103 0.272727273 0.448275862 22 1 0 28 2L:20919131-20919198 6 30 535 FBgn0266369 334.6733333 13.78 21.06333333 0.089639649 2.177068215 1.424275993 2 2 2 0.01 dme-miR-184-3p 7mer-m8 TCCGTCC 2L 20965583 20965589 - 2L_20965583_20965589_- 0.661615243 0.661615243 0.661615243 0 CG42238 FBtr0290305|FBtr0331200|FBtr0331199|FBtr0290306 20965518|20965518|20965518|20965518 20967385|20967385|20967385|20967385 2L - 20965555 20965607 3'utr CG42238 FlyBase G12079.1 TACAAATTATTAACTGATTCCGTCCGCACCCTGACAACTGTGTTAACTAACTT 444 20965590 0.741900509 9 440 2489 0.99255121 2.425697213 0.009310987 0.177927928 0.320297952 444 3 1 533 2L:20965555-20965607 7 CG42238 FBtr0290306|FBtr0331199|FBtr0331200|FBtr0290305 20965518|20965518|20965518|20965518 20967385|20967385|20967385|20967385 TCCGTCC 7mer-m8 dme-miR-184-3p 2L - 20965549 20965606 3'utr CG42238 FlyBase G9257.1 ACAAATTATTAACTGATTCCGTCCGCACCCTGACAACTGTGTTAACTAACTTTAAGAT 230 20965590 0.963040554 7 227 1277 0.983651226 2.557507202 0 0.386956522 0.615803815 230 6 0 361 2L:20965549-20965606 7 335.5 536 FBgn0250867 324.93 11.38 17.49333333 1.032530083 29.48154657 19.17873476 1 1 1 0.01 dme-miR-14-3p 6mer2-7 AGACTG 2L 20965825 20965830 - 2L_20965825_20965830_- 1 1 1 0 CG42238 FBtr0290305|FBtr0331200|FBtr0331199|FBtr0290306 20965518|20965518|20965518|20965518 20967385|20967385|20967385|20967385 2L - 20965803 20965843 3'utr CG42238 FlyBase G12080.1 TCAAATCGCCTATAGACTGTAGCACTATAGCTAAAAGGTAT 10 20965832 0.955877721 2 10 51 1 1.113943352 0 0.3 0.461538462 10 0 0 13 2L:20965803-20965843 6 CG42238 FBtr0290306|FBtr0331199|FBtr0331200|FBtr0290305 20965518|20965518|20965518|20965518 20967385|20967385|20967385|20967385 AGACTG 6mer2-7 dme-miR-14-3p 2L - 20965811 20965848 3'utr CG42238 FlyBase G9258.1 AAACGTCAAATCGCCTATAGACTGTAGCACTATAGCTA 5 20965831 0.956116811 3 5 26 1 0.84509804 0 0.2 0.428571429 5 0 0 7 2L:20965811-20965848 6 7.5 537 FBgn0250867 324.93 11.38 17.49333333 0.023081895 0.659050967 0.428734756 2 1 1.5 0.01 dme-miR-965-3p 6mer3-8 TACGCT 2L 209931 209936 + 2L_209931_209936_+ 1 1 1 0 Tbc1d15-17 FBtr0332339|FBtr0332338|FBtr0078125 209857|209857|209857 210725|210506|210506 2L + 209878 209971 3'utr Tbc1d15-17 FlyBase G639.1 ATGGACACCTGGAAAAAACAAAGCCAATAGCCCACAGAAAAGTATGCGCAAATTACGCTGCCCTTCAAGATGGTTGCCTAACTAGATTATATTT 18 209922 0.976205898 9 16 98 0.95 1.278753601 0.15 0.111111111 0.2 18 1 0 19 2L:209878-209971 6 Tbc1d15-17 FBtr0332338|FBtr0332339|FBtr0078125 209857|209857|209857 210506|210725|210506 TACGCT 6mer3-8 dme-miR-965-3p 2L + 209905 209960 3'utr Tbc1d15-17 FlyBase G511.1 TAGCCCACAGAAAAGTATGCGCAAATTACGCTGCCCTTCAAGATGGTTGCCTAACT 5 209922 0.940106891 3 5 25 1 0.84509804 0 0.4 0.571428571 5 0 0 7 2L:209905-209960 6 7.5 538 FBgn0031233 273.62 11.06666667 17.00333333 0.027410277 0.677710843 0.441089982 9 9 9 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 210344 210349 + 2L_210344_210349_+ 1 1 1 0 Tbc1d15-17 FBtr0332339|FBtr0332339|FBtr0332339|FBtr0332338|FBtr0332338|FBtr0332338|FBtr0078125|FBtr0078125|FBtr0078125 209857|209857|209857|209857|209857|209857|209857|209857|209857 210725|210725|210725|210506|210506|210506|210506|210506|210506 2L + 210324 210408 3'utr Tbc1d15-17 FlyBase G642.1 AAAGAAATTAGTTCTCGTGCCTGTGAACTCAAAACATTTTAGGTATCACTTTGCTTTATCGGACTTCAACACGCCTGTCTTTTTT 35 210341 0.987792847 9 35 312 1 1.612783857 0.097560976 0.171428571 0.292682927 35 0 0 41 2L:210324-210408 6 Tbc1d15-17 FBtr0332338|FBtr0332338|FBtr0332338|FBtr0332339|FBtr0332339|FBtr0332339|FBtr0078125|FBtr0078125|FBtr0078125 209857|209857|209857|209857|209857|209857|209857|209857|209857 210506|210506|210506|210725|210725|210725|210506|210506|210506 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 210324 210358 3'utr Tbc1d15-17 FlyBase G515.1 AAAGAAATTAGTTCTCGTGCCTGTGAACTCAAAAC 13 210342 0.738464643 4 13 87 1 1.255272505 0 0.230769231 0.444444444 13 0 0 18 2L:210324-210358 6 13 539 FBgn0031233 273.62 11.06666667 17.00333333 0.047511147 1.174698795 0.764555969 3 2 2.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 210427 210432 + 2L_210427_210432_+ 1 1 1 0 Tbc1d15-17 FBtr0332339|FBtr0332339|FBtr0332339|FBtr0332338|FBtr0332338|FBtr0332338|FBtr0078125|FBtr0078125|FBtr0078125 209857|209857|209857|209857|209857|209857|209857|209857|209857 210725|210725|210725|210506|210506|210506|210506|210506|210506 2L + 210410 210448 3'utr Tbc1d15-17 FlyBase G643.1 TTAAGTTTAGTCAATTACTGTGAATATACATCCGTATAC 16 210434 0.732856639 4 12 143 0.705882353 1.079181246 0.058823529 0.0625 0.117647059 16 5 0 12 2L:210410-210448 6 Tbc1d15-17 FBtr0332338|FBtr0332338|FBtr0332338|FBtr0332339|FBtr0332339|FBtr0332339|FBtr0078125|FBtr0078125|FBtr0078125 209857|209857|209857|209857|209857|209857|209857|209857|209857 210506|210506|210506|210725|210725|210725|210506|210506|210506 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 210412 210448 3'utr Tbc1d15-17 FlyBase G517.1 AAGTTTAGTCAATTACTGTGAATATACATCCGTATAC 12 210425 0.676549666 5 11 100 0.9375 1.176091259 0 0.25 0.4375 12 1 0 15 2L:210412-210448 6 14 540 FBgn0031233 273.62 11.06666667 17.00333333 0.05116585 1.265060241 0.823367967 -7 2 -2.5 0.01 dme-miR-34-5p 7mer-A1 ACTGCCA 2L 21136321 21136327 - 2L_21136321_21136327_- 0.823349562 0.823349562 0.823349562 0 Dap160 FBtr0333087|FBtr0333086 21135274|21135274 21137095|21137095 2L - 21136307 21136359 3'utr Dap160 FlyBase G12107.1 TGATTTATTGACTAAGTTAAGCGCTTATCTGAACTGCCATAACTGTATTAATT 49 21136330 0.795762379 7 47 358 0.962962963 1.238882089 0.111111111 0.040816327 0.12962963 49 0 2 52 2L:21136307-21136359 7 Dap160 FBtr0333086|FBtr0333087 21135274|21135274 21137095|21137095 ACTGCCA 7mer-A1 dme-miR-34-5p 2L - 21136306 21136352 3'utr Dap160 FlyBase G9277.1 TTGACTAAGTTAAGCGCTTATCTGAACTGCCATAACTGTATTAATTT 43 21136330 0.787847382 6 41 323 1 1.763427994 0.275862069 0.302325581 0.482758621 43 0 0 58 2L:21136306-21136352 7 44 541 FBgn0023388 1725.443333 51.01 78.44666667 0.025500693 0.862575965 0.560890626 3 3 3 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2L 21137286 21137292 - 2L_21137286_21137292_- 0.521223855 0.521223855 0.521223855 0 Dap160 FBtr0081504|FBtr0081503|FBtr0301276 21137129|21137129|21137129 21137476|21137476|21137476 2L - 21137180 21137376 5'utr Dap160 FlyBase G12110.1 AAGTTCTCGCCTATTCTCGCTATTGAAACCCCCACTTTAGTGTTTATTTGTTGCAATATTTCCAAGATGTATCTAATTGTTAATTGTGATTATTTAGTTTTTAGATTTACTCCTAAGCTTATCACTAGCGACCTCTCTATTTTCGCTTAGCTAATTTCTAGTGTTATTTCATTTATGTATTTATTTAGTCGGCATAA 81 21137293 0.995423466 30 71 1049 0.87628866 1.62838893 0.164948454 0.172839506 0.309278351 81 11 1 85 2L:21137180-21137376 7 Dap160 FBtr0301276|FBtr0081503|FBtr0081504 21137129|21137129|21137129 21137476|21137476|21137476 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 21137212 21137320 5'utr Dap160 FlyBase G9278.1 TATTTCCAAGATGTATCTAATTGTTAATTGTGATTATTTAGTTTTTAGATTTACTCCTAAGCTTATCACTAGCGACCTCTCTATTTTCGCTTAGCTAATTTCTAGTGTT 58 21137293 0.995472367 22 53 786 0.928571429 1.414973348 0.130952381 0.362068966 0.55952381 58 4 2 78 2L:21137212-21137320 7 45 542 FBgn0023388 1725.443333 51.01 78.44666667 0.026080254 0.882179965 0.573638141 1 1 1 0.01 dme-miR-190-5p 6mer3-8 ACATAT 2L 21137423 21137428 - 2L_21137423_21137428_- 1 1 1 0 Dap160 FBtr0081504|FBtr0081503|FBtr0301276 21137129|21137129|21137129 21137476|21137476|21137476 2L - 21137410 21137541 lincRNA_exon-lincRNA_intron Dap160 FlyBase G12111.1 ACTATGTGGGGCCCTTCGTGACGTCCGGTAAGCCAGCAAAAGCAAATGGCACCACCAAGAAGTGAATCTCACATACCGATCCAGCTTAGCTCTCTAGTTACCACATTCCGTACACATATTGTTATGTTTACT 155 21137436 0.946183089 12 154 1016 0.994565217 2.26245109 0.086956522 0.148387097 0.282608696 155 1 0 183 2L:21137410-21137541 6 Dap160 FBtr0301276|FBtr0081503|FBtr0081504 21137129|21137129|21137129 21137476|21137476|21137476 ACATAT 6mer3-8 dme-miR-190-5p 2L - 21137398 21137496 stop_codon Dap160 FlyBase G9279.1 ATGGCACCACCAAGAAGTGAATCTCACATACCGATCCAGCTTAGCTCTCTAGTTACCACATTCCGTACACATATTGTTATGTTTACTATTATTTTCGAA 108 21137436 0.973929657 8 107 655 0.993975904 2.217483944 0.102409639 0.416666667 0.620481928 108 1 0 165 2L:21137398-21137496 6 94 543 FBgn0023388 1725.443333 51.01 78.44666667 0.054478752 1.842775926 1.198266338 8 8 8 0.01 dme-miR-276a-3p 7mer-A1 GTTCCTA 2L 21145189 21145195 - 2L_21145189_21145195_- 0.823349562 0.823349562 0.823349562 0 del FBtr0333085|FBtr0333084|FBtr0081502 21145135|21145135|21145135 21145298|21145298|21145298 2L - 21145177 21145216 3'utr del FlyBase G12127.1 AAATTAAGTTATCAAATTATTGTTCCTATTTGATTATTAC 47 21145197 0.729575614 9 46 557 0.963636364 1.72427587 0.036363636 0.170212766 0.290909091 47 2 0 53 2L:21145177-21145216 7 del FBtr0333084|FBtr0081502|FBtr0333085 21145135|21145135|21145135 21145298|21145298|21145298 GTTCCTA 7mer-A1 dme-miR-276a-3p 2L - 21145176 21145263 3'utr del FlyBase G9290.1 CTTGACATATATCATAATCTCTTCATTATTGATGCACATAATTGAATAAATTAAGTTATCAAATTATTGTTCCTATTTGATTATTACA 38 21145197 0.910733043 13 38 443 1 1.770852012 0.203389831 0.368421053 0.593220339 38 0 0 59 2L:21145176-21145263 7 39 544 FBgn0086251 92 3.553333333 5.473333333 0.423913043 10.97560976 7.12545676 2 2 2 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 21160797 21160802 - 2L_21160797_21160802_- 1 1 1 0 Nbr FBtr0081499 21160634 21161011 2L - 21160764 21160816 3'utr Nbr FlyBase G12152.1 ATCAGAAGGAAACTATGTGACTGCGAGCAGGATATGAAAGAATGAATTTTATT 55 21160801 0.715927094 7 55 225 1 1.785329835 0.213114754 0.109090909 0.196721311 55 0 0 61 2L:21160764-21160816 6 Nbr FBtr0081499 21160634 21161011 ATGTGA 6mer3-8 dme-miR-1003-3p 2L - 21160721 21160825 3'utr Nbr FlyBase G9309.1 ATGTTACAAATCAGAAGGAAACTATGTGACTGCGAGCAGGATATGAAAGAATGAATTTTATTACGTTATGATTTCAAGCTCACTGTATCTCCATACTTTAAATAC 76 21160800 0.756674088 11 74 396 0.975409836 1.774516966 0.172131148 0.434210526 0.647540984 76 2 1 119 2L:21160721-21160825 6 45.5 545 FBgn0032924 175.9366667 9.03 13.69333333 0.25861579 5.03875969 3.32278481 -1 -2 -1.5 0.01 dme-miR-277-3p 6mer2-7 GCATTT 2L 21166652 21166657 - 2L_21166652_21166657_- 0.999996705 1 0.999998352 2.33E-06 CG43345 FBtr0346589|FBtr0306974 21166044|21166044 21166678|21166678 2L - 21166614 21166687 stop_codon CG43345 FlyBase G12168.1 CGAATTTGAATTACGCTTTTAAACCTGCCGGCATTTTGCAACACCGCCACCAGCTGTTCATGTCATAACAAACG 36 21166677 0.775732219 9 34 236 0.930232558 1 0.162790698 0.194444444 0.325581395 36 0 3 40 2L:21166614-21166687 6 CG43345 FBtr0306974|FBtr0346589 21166044|21166044 21166678|21166678 GCATTT 6mer2-7 dme-miR-277-3p 2L - 21166616 21166688 stop_codon CG43345 FlyBase G9321.1 ACGAATTTGAATTACGCTTTTAAACCTGCCGGCATTTTGCAACACCGCCACCAGCTGTTCATGTCATAACAAA 20 21166677 0.82383495 9 20 157 1 1.380211242 0.333333333 0.2 0.333333333 20 0 0 24 2L:21166616-21166688 6 11 546 FBgn0263050 171.61 9.2 13.98666667 0.064098829 1.195652174 0.786463298 20 20 20 0.01 dme-miR-7-5p 6mer2-7 TCTTCC 2L 21172700 21172705 + 2L_21172700_21172705_+ 1 1 1 0 Acon FBtr0300425|FBtr0346587|FBtr0343871 21172647|21172647|21172647 21173017|21173184|21173185 2L + 21172631 21172761 stop_codon Acon FlyBase G5785.1 AAGGAGCTGGCCCAGTAAATGGTCCTGGACCTACTTAAGACACCCAGTCAAGAAGCCTGATCCCAACCTTCTTCCTGTAGGTGAACACACTCAAATTCACAACGGAAGCAATCGAATTATGGTATTGTTAT 21 21172701 0.967201718 14 19 103 0.964285714 1.431363764 0.071428571 0.285714286 0.464285714 21 1 0 27 2L:21172631-21172761 6 Acon FBtr0081473|FBtr0346587|FBtr0343871|FBtr0300425 21172647|21172647|21172647|21172647 21172895|21173184|21173185|21173017 TCTTCC 6mer2-7 dme-miR-7-5p 2L + 21172668 21172740 3'utr Acon FlyBase G4492.2 AGACACCCAGTCAAGAAGCCTGATCCCAACCTTCTTCCTGTAGGTGAACACACTCAAATTCACAACGGAAGCA 16 21172711 0.965395777 7 11 58 0.681818182 1.176091259 0.136363636 0.375 0.545454545 16 7 0 15 2L:21172668-21172740 6 7 547 FBgn0010100 1510.516667 65.87 100.8933333 0.004634176 0.106269926 0.069380204 -1 -11 -6 0.01 dme-miR-317-5p 6mer3-8 GTATCC 2L 21212752 21212757 - 2L_21212752_21212757_- 1 1 1 0 Atg18b FBtr0081487|FBtr0331678 21212691|21212320 21213065|21213065 2L - 21212730 21212767 3'utr Atg18b FlyBase G12187.1 ATCAAACTCTGTATCCTTTAGAAACGTAGGTATAAGTG 6 21212750 0.773786343 2 6 49 1 0.903089987 0 0.166666667 0.375 6 0 0 8 2L:21212730-21212767 6 Atg18b FBtr0081487|FBtr0331678 21212691|21212320 21213065|21213065 GTATCC 6mer3-8 dme-miR-317-5p 2L - 21212730 21212779 3'utr Atg18b FlyBase G9337.1 CTTAGGCACTAAATCAAACTCTGTATCCTTTAGAAACGTAGGTATAAGTG 5 21212750 0.981768717 3 5 38 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2L:21212730-21212779 6 5 548 FBgn0032935 177.3333333 8.876666667 13.63666667 0.028195489 0.563274502 0.366658519 -7 -7 -7 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 21212838 21212843 - 2L_21212838_21212843_- 1 1 1 0 Atg18b FBtr0081487|FBtr0331678 21212691|21212320 21213065|21213065 2L - 21212824 21212868 3'utr Atg18b FlyBase G12188.1 TGGATGTATGTATGTATATAGAAATGTACCTAAAAGAATTTCACA 127 21212844 0.830497384 2 126 624 0.993939394 2.214843848 0.060606061 0.220472441 0.4 127 1 0 164 2L:21212824-21212868 6 Atg18b FBtr0081487|FBtr0331678 21212691|21212320 21213065|21213065 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L - 21212795 21212865 3'utr Atg18b FlyBase G9338.1 ATGTATGTATGTATATAGAAATGTACCTAAAAGAATTTCACATAAAAATCTAGATATTCTTGTGTTAGTTT 83 21212844 0.961400997 4 81 408 0.983870968 2.086359831 0.064516129 0.34939759 0.564516129 83 2 0 122 2L:21212795-21212865 6 103 549 FBgn0032935 177.3333333 8.876666667 13.63666667 0.580827068 11.60345475 7.553165485 1 1 1 0.01 dme-miR-986-5p 7mer-A1 TTCGAGA 2L 21213031 21213037 - 2L_21213031_21213037_- 0.823349562 0.823306908 0.823328235 3.02E-05 Atg18b FBtr0081487|FBtr0331678 21212691|21212320 21213065|21213065 2L - 21213007 21213080 stop_codon Atg18b FlyBase G12189.1 ACCGCTAAGGATTGACTACGTAACCGTAACATCAAGGATATGGTTCGAGATAATAGACAGCAGAATTTTTAAGC 34 21213027 0.945303711 6 34 154 1 1.579783597 0.289473684 0.117647059 0.210526316 34 0 0 38 2L:21213007-21213080 7 Atg18b FBtr0081487|FBtr0331678 21212691|21212320 21213065|21213065 TTCGAGA 7mer-A1 dme-miR-986-5p 2L - 21213006 21213041 3'utr Atg18b FlyBase G9339.1 ATGGTTCGAGATAATAGACAGCAGAATTTTTAAGCA 15 21213027 0.934248509 2 15 61 1 1.255272505 0.388888889 0.133333333 0.277777778 15 0 0 18 2L:21213006-21213041 7 22.5 550 FBgn0032935 177.3333333 8.876666667 13.63666667 0.126879699 2.534735261 1.649963334 -10 -10 -10 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 2L 21231161 21231166 + 2L_21231161_21231166_+ 1 1 1 0 CG8677 FBtr0346586|FBtr0331677 21231107|21231107 21232059|21231692 2L + 21231129 21231171 3'utr CG8677 FlyBase G5817.1 ATTTAAATTTGTATATATCGATCTGCTTGTAAAGTTAAAAAAC 26 21231155 0.70602144 7 26 224 1 1.505149978 0.21875 0.230769231 0.375 26 0 0 32 2L:21231129-21231171 6 CG8677 FBtr0346586|FBtr0331677 21231107|21231107 21232059|21231692 AGTTAA 6mer3-8 dme-miR-999-3p 2L + 21231100 21231171 stop_codon CG8677 FlyBase G4519.1 GACACATAACAAACGCCGGCGGGAGCATTATTTAAATTTGTATATATCGATCTGCTTGTAAAGTTAAAAAAC 26 21231156 0.991159164 5 22 232 0.828571429 0.985276743 0.085714286 0.230769231 0.428571429 26 4 2 29 2L:21231100-21231171 6 18 551 FBgn0026577 1892.863333 25.80333333 39.86666667 0.009509403 0.697584291 0.451505017 6 5 5.5 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 2L 21231411 21231416 + 2L_21231411_21231416_+ 1 0.999999999 1 0 CG8677 FBtr0346586|FBtr0331677 21231107|21231107 21232059|21231692 2L + 21231401 21231488 3'utr CG8677 FlyBase G5819.2 AGTTCCCTTTATGTGCTGTTACAGTTTAGCTAAATCAAGCATCAACTACTTTTAGTATTTTAATTTAGCTCTATATGATTTGAGCCCT 14 21231412 0.879832397 7 13 137 0.944444444 1.230448921 0.166666667 0.142857143 0.333333333 14 1 0 17 2L:21231401-21231488 6 CG8677 FBtr0346586|FBtr0331677 21231107|21231107 21232059|21231692 ATGTGC 6mer3-8 dme-miR-305-3p 2L + 21231392 21231486 3'utr CG8677 FlyBase G4522.1 ATTTAACTTAGTTCCCTTTATGTGCTGTTACAGTTTAGCTAAATCAAGCATCAACTACTTTTAGTATTTTAATTTAGCTCTATATGATTTGAGCC 16 21231412 0.909646223 7 15 159 0.958333333 1.361727836 0 0.375 0.583333333 16 1 0 23 2L:21231392-21231486 6 5 552 FBgn0026577 1892.863333 25.80333333 39.86666667 0.002641501 0.193773414 0.12541806 -1 -1 -1 0.01 dme-miR-8-3p 6mer2-7 AGTATT 2L 21231454 21231459 + 2L_21231454_21231459_+ 1 1 1 0 CG8677 FBtr0346586|FBtr0331677 21231107|21231107 21232059|21231692 2L + 21231401 21231488 3'utr CG8677 FlyBase G5819.2 AGTTCCCTTTATGTGCTGTTACAGTTTAGCTAAATCAAGCATCAACTACTTTTAGTATTTTAATTTAGCTCTATATGATTTGAGCCCT 14 21231452 0.879832397 7 13 137 0.944444444 1.230448921 0.166666667 0.142857143 0.333333333 14 1 0 17 2L:21231401-21231488 6 CG8677 FBtr0346586|FBtr0331677 21231107|21231107 21232059|21231692 AGTATT 6mer2-7 dme-miR-8-3p 2L + 21231392 21231486 3'utr CG8677 FlyBase G4522.1 ATTTAACTTAGTTCCCTTTATGTGCTGTTACAGTTTAGCTAAATCAAGCATCAACTACTTTTAGTATTTTAATTTAGCTCTATATGATTTGAGCC 16 21231452 0.909646223 7 15 159 0.958333333 1.361727836 0 0.375 0.583333333 16 1 0 23 2L:21231392-21231486 6 6.5 553 FBgn0026577 1892.863333 25.80333333 39.86666667 0.003433951 0.251905439 0.163043478 2 2 2 0.01 dme-miR-305-3p 7mer-m8 ATGTGCC 2L 21257941 21257947 + 2L_21257941_21257947_+ 0.674515655 0.674515655 0.674515655 0 Hr39 FBtr0081479|FBtr0081481 21257828|21257828 21259675|21259675 2L + 21257904 21257984 3'utr Hr39 FlyBase G5836.2 TTCTATAGATAAGATCCTTACTGTAAGTTCTGAAAACATGTGCCTAAAAACCAAAGCCACGATAGCAGTCACATCAGGCCC 21 21257942 0.906102357 8 19 101 0.913043478 1.322219295 0 0.095238095 0.173913043 21 2 0 21 2L:21257904-21257984 7 Hr39 FBtr0081480|FBtr0081481|FBtr0081479 21257828|21257828|21257828 21258196|21259675|21259675 ATGTGCC 7mer-m8 dme-miR-305-3p 2L + 21257914 21257972 3'utr Hr39 FlyBase G4533.1 AAGATCCTTACTGTAAGTTCTGAAAACATGTGCCTAAAAACCAAAGCCACGATAGCAGT 8 21257942 0.938136675 3 8 36 1 1.041392685 0 0.375 0.545454545 8 0 0 11 2L:21257914-21257972 7 10 554 FBgn0261239 651.04 19.10333333 29.40333333 0.015360039 0.523468854 0.340097495 -1 -1 -1 0.01 dme-miR-33-5p 8mer-A1 CAATGCAA 2L 21259641 21259648 + 2L_21259641_21259648_+ 0.634552243 0.634551471 0.634551857 4.95E-07 Hr39 FBtr0081479|FBtr0081481 21257828|21257828 21259675|21259675 2L + 21259575 21259663 3'utr Hr39 FlyBase G5842.1 AAAACTCAATTTTGCTTTTAAATAAATTTAATAAGTAAAATTCAACAATAATTGATATACAATTGTCAATGCAATATTTTGTAATAAAA 13 21259640 0.991411029 3 13 135 1 1.146128036 0.142857143 0.076923077 0.142857143 13 0 0 14 2L:21259575-21259663 8 Hr39 FBtr0081481|FBtr0081479 21257828|21257828 21259675|21259675 CAATGCAA 8mer-A1 dme-miR-33-5p 2L + 21259624 21259664 3'utr Hr39 FlyBase G4537.1 AATTGATATACAATTGTCAATGCAATATTTTGTAATAAAAA 10 21259640 0.821326769 2 10 88 1 1.113943352 0 0.3 0.461538462 10 0 0 13 2L:21259624-21259664 8 10 555 FBgn0261239 651.04 19.10333333 29.40333333 0.015360039 0.523468854 0.340097495 1 1 1 0.01 dme-miR-965-3p 6mer3-8 TACGCT 2L 21281651 21281656 + 2L_21281651_21281656_+ 1 1 1 0 CG8671 FBtr0330680|FBtr0081484|FBtr0330678|FBtr0114602|FBtr0346464|FBtr0081483|FBtr0330679 21281513|21281513|21281513|21281513|21281513|21281513|21281513 21282037|21282037|21282514|21282037|21282790|21282037|21282514 2L + 21281411 21281713 stop_codon CG8671 FlyBase G5870.1 TGTACATCGCTCGCGATGGAACCGCCTCCCTGGGCGGACATGAGGTTAAATCAAGCGTACGAGCGGGCGCCCTAAAGCAGGTGGTAATGCAGGATAGAAGATAGTAGTATCCGAGACTCACAACTCCTTTTTAAAATTAATTAGAAGACTTATTGATCAATTAAAATGGAGTATTGAACTAAAAGAAATAGTTTAGGTAATACAAACATGTTTACTCTCAAACAAAAGTGAGAATGCAAATACGCTATATAAGAGTATATAAAATGTTTGTCGGAACTACACTGCTATGAATGTAATTAGCTA 143 21281651 0.967535235 30 141 772 0.989130435 1.959041392 0.10326087 0.258741259 0.423913043 143 1 1 182 2L:21281411-21281713 6 CG8671 FBtr0081483|FBtr0330679|FBtr0114602|FBtr0346464|FBtr0330678|FBtr0330680|FBtr0081484 21281513|21281513|21281513|21281513|21281513|21281513|21281513 21282037|21282514|21282037|21282790|21282514|21282037|21282037 TACGCT 6mer3-8 dme-miR-965-3p 2L + 21281613 21281673 3'utr CG8671 FlyBase G4561.2 CAAACATGTTTACTCTCAAACAAAAGTGAGAATGCAAATACGCTATATAAGAGTATATAAA 19 21281651 0.948675233 4 18 81 0.923076923 1.380211242 0 0.263157895 0.461538462 19 2 0 24 2L:21281613-21281673 6 32.5 556 FBgn0032938 1894.276667 62.21666667 95.35 0.017156945 0.522368069 0.340849502 0 0 0 0.01 dme-miR-999-3p 7mer-A1 GTTAACA 2L 21281764 21281770 + 2L_21281764_21281770_+ 0.823349562 0.823349562 0.823349562 0 CG8671 FBtr0330680|FBtr0081484|FBtr0330678|FBtr0114602|FBtr0346464|FBtr0081483|FBtr0330679 21281513|21281513|21281513|21281513|21281513|21281513|21281513 21282037|21282037|21282514|21282037|21282790|21282037|21282514 2L + 21281728 21281866 3'utr CG8671 FlyBase G5871.1 TGTTTATAGACAAATACGCATGTATATTATAGATTTGTTAACAGGCATAACTTGTCTAGTTGTATTTGCAAGTGTTGTGAATCAGGTAAACAACCGTTAACAATTAGGAAAACCAAAAATGAAATTCATAAAGCTGCAC 25 21281748 0.987085319 10 21 190 0.866666667 1.414973348 0.166666667 0.2 0.333333333 25 4 0 26 2L:21281728-21281866 7 CG8671 FBtr0081483|FBtr0330679|FBtr0114602|FBtr0346464|FBtr0330678|FBtr0330680|FBtr0081484 21281513|21281513|21281513|21281513|21281513|21281513|21281513 21282037|21282514|21282037|21282790|21282514|21282037|21282037 GTTAACA 7mer-A1 dme-miR-999-3p 2L + 21281735 21281815 3'utr CG8671 FlyBase G4563.1 AGACAAATACGCATGTATATTATAGATTTGTTAACAGGCATAACTTGTCTAGTTGTATTTGCAAGTGTTGTGAATCAGGTA 10 21281748 0.978508433 6 10 73 1 1.113943352 0.153846154 0.3 0.461538462 10 0 0 13 2L:21281735-21281815 7 5.5 557 FBgn0032938 1894.276667 62.21666667 95.35 0.002903483 0.08840075 0.057682223 16 16 16 0.01 dme-miR-307a-3p 7mer-A1 GTTGTGA 2L 21281801 21281807 + 2L_21281801_21281807_+ 0.823349562 0.823348357 0.823348959 8.49E-07 CG8671 FBtr0330680|FBtr0081484|FBtr0330678|FBtr0114602|FBtr0346464|FBtr0081483|FBtr0330679 21281513|21281513|21281513|21281513|21281513|21281513|21281513 21282037|21282037|21282514|21282037|21282790|21282037|21282514 2L + 21281728 21281866 3'utr CG8671 FlyBase G5871.1 TGTTTATAGACAAATACGCATGTATATTATAGATTTGTTAACAGGCATAACTTGTCTAGTTGTATTTGCAAGTGTTGTGAATCAGGTAAACAACCGTTAACAATTAGGAAAACCAAAAATGAAATTCATAAAGCTGCAC 25 21281809 0.987085319 10 21 190 0.866666667 1.414973348 0.166666667 0.2 0.333333333 25 4 0 26 2L:21281728-21281866 7 CG8671 FBtr0081483|FBtr0330679|FBtr0114602|FBtr0346464|FBtr0330678|FBtr0330680|FBtr0081484 21281513|21281513|21281513|21281513|21281513|21281513|21281513 21282037|21282514|21282037|21282790|21282514|21282037|21282037 GTTGTGA 7mer-A1 dme-miR-307a-3p 2L + 21281735 21281815 3'utr CG8671 FlyBase G4563.1 AGACAAATACGCATGTATATTATAGATTTGTTAACAGGCATAACTTGTCTAGTTGTATTTGCAAGTGTTGTGAATCAGGTA 10 21281809 0.978508433 6 10 73 1 1.113943352 0.153846154 0.3 0.461538462 10 0 0 13 2L:21281735-21281815 7 5 558 FBgn0032938 1894.276667 62.21666667 95.35 0.00263953 0.080364318 0.052438385 -8 -8 -8 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 2L 21286198 21286204 - 2L_21286198_21286204_- 0.782911824 0.782911824 0.782911824 0 Mio FBtr0301461|FBtr0301459|FBtr0301457|FBtr0301460|FBtr0301464|FBtr0081524|FBtr0301458|FBtr0081525|FBtr0301462|FBtr0081527|FBtr0301463 21286076|21286076|21286079|21286076|21286076|21286076|21286076|21286076|21286076|21286076|21286076 21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291 2L - 21286182 21286236 3'utr Mio FlyBase G12195.2 AAATAATTTTTGCTAACTGCTCAGCACTAATTGTACAAAATGCCTGATGAGCATA 31 21286206 0.971763703 6 28 169 0.921052632 1.544068044 0.368421053 0.193548387 0.342105263 31 3 0 35 2L:21286182-21286236 7 Mio FBtr0081525|FBtr0301462|FBtr0081527|FBtr0301463|FBtr0081524|FBtr0301458|FBtr0301460|FBtr0301459|FBtr0301464|FBtr0301461|FBtr0301457 21286076|21286076|21286076|21286076|21286076|21286076|21286076|21286076|21286076|21286076|21286079 21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291 GTACAAA 7mer-A1 dme-miR-305-5p 2L - 21286179 21286215 3'utr Mio FlyBase G9342.1 CAGCACTAATTGTACAAAATGCCTGATGAGCATATTT 10 21286206 0.764914298 3 8 61 0.846153846 1.041392685 0.076923077 0.2 0.384615385 10 2 0 11 2L:21286179-21286215 7 19.5 559 FBgn0032940 1888.76 53.04 81.26333333 0.010324234 0.367647059 0.239960622 2 2 2 0.01 dme-miR-283-5p 6mer3-8 TGATAT 2L 21286267 21286272 - 2L_21286267_21286272_- 1 1 1 0 Mio FBtr0301461|FBtr0301459|FBtr0301457|FBtr0301460|FBtr0301464|FBtr0081524|FBtr0301458|FBtr0081525|FBtr0301462|FBtr0081527|FBtr0301463 21286076|21286076|21286079|21286076|21286076|21286076|21286076|21286076|21286076|21286076|21286076 21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291 2L - 21286257 21286322 stop_codon Mio FlyBase G12196.1 TGGCCAGCATCCAAATCTGCATGGACCCTAACCGTTGATGCTGATGTCCTTGATATGAATTTATTT 12 21286272 0.980147276 6 11 87 1 1.176091259 0.2 0.25 0.4 12 0 0 15 2L:21286257-21286322 6 Mio FBtr0081525|FBtr0301462|FBtr0081527|FBtr0301463|FBtr0081524|FBtr0301458|FBtr0301460|FBtr0301459|FBtr0301464|FBtr0301461|FBtr0301457 21286076|21286076|21286076|21286076|21286076|21286076|21286076|21286076|21286076|21286076|21286079 21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291 TGATAT 6mer3-8 dme-miR-283-5p 2L - 21286267 21286301 stop_codon Mio FlyBase G9343.1 TGGACCCTAACCGTTGATGCTGATGTCCTTGATAT 8 21286273 0.858599406 4 8 55 1 1 0.3 0.25 0.4 8 0 0 10 2L:21286267-21286301 5 6.5 560 FBgn0032940 1888.76 53.04 81.26333333 0.003441411 0.12254902 0.079986874 0 1 0.5 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 2L 21319110 21319115 + 2L_21319110_21319115_+ 0.99999987 0.999999972 0.999999921 7.07E-08 crc FBtr0081512|FBtr0332001|FBtr0081513|FBtr0332002 21319056|21319056|21319056|21319056 21319527|21319527|21319527|21319527 2L + 21319086 21319133 3'utr crc FlyBase G5894.1 CGTCGTTTGCAAAGTTATTGTTATAGTTAAACCCAAGCCTCTTCCATA 7 21319103 0.930633238 4 6 58 0.888888889 0.602059991 0.222222222 0.285714286 0.444444444 7 0 1 8 2L:21319086-21319133 6 crc FBtr0081513|FBtr0332002|FBtr0081512|FBtr0332001 21319056|21319056|21319056|21319056 21319527|21319527|21319527|21319527 AGTTAA 6mer3-8 dme-miR-999-3p 2L + 21319004 21319135 stop_codon crc FlyBase G4578.1 ATGCGCTATCTGCGCCAGCTGATTCGAGAGTTCTACCATGAACGCAAGCGCTAGGCTTTATTTTCTTTGAAATCAATTTTATCGTCGTTTGCAAAGTTATTGTTATAGTTAAACCCAAGCCTCTTCCATAAA 27 21319103 0.877541477 19 24 227 0.771428571 1.431363764 0.057142857 0.148148148 0.342857143 27 8 0 27 2L:21319004-21319135 6 7 561 FBgn0000370 8504.88 510.09 782.7766667 0.000823057 0.013723068 0.008942525 7 7 7 0.01 dme-miR-318-3p 6mer2-7 CCAGTG 2L 21319285 21319290 + 2L_21319285_21319290_+ 1 1 1 0 crc FBtr0081512|FBtr0332001|FBtr0081513|FBtr0332002 21319056|21319056|21319056|21319056 21319527|21319527|21319527|21319527 2L + 21319146 21319340 3'utr crc FlyBase G5895.1 TCATAATGTTTCAATGTAATACTATCAATAACAATCTCCGGGTTGCCCAAAATCTACAAATCACCAAAGTACGCAGCCTGTCCTTTGTCCTACATTTTTGGCACTAATGACGAGTCTCTGAATTCGGAAATATTTGTTGCCAGTGGGGCCTAAAGGCGACCCCATATCCCAAGCAGCACGGTCCAATGTAAAAAC 62 21319280 0.97814563 23 57 379 0.927536232 1.505149978 0.202898551 0.112903226 0.202898551 62 4 1 64 2L:21319146-21319340 6 crc FBtr0081513|FBtr0332002|FBtr0081512|FBtr0332001 21319056|21319056|21319056|21319056 21319527|21319527|21319527|21319527 CCAGTG 6mer2-7 dme-miR-318-3p 2L + 21319242 21319337 3'utr crc FlyBase G4580.1 TTTGGCACTAATGACGAGTCTCTGAATTCGGAAATATTTGTTGCCAGTGGGGCCTAAAGGCGACCCCATATCCCAAGCAGCACGGTCCAATGTAAA 24 21319279 0.901642514 10 22 140 0.875 1.544068044 0.175 0.416666667 0.65 24 5 0 35 2L:21319242-21319337 6 15 562 FBgn0000370 8504.88 510.09 782.7766667 0.001763693 0.029406575 0.019162554 5 6 5.5 0.01 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2L 21356913 21356918 + 2L_21356913_21356918_+ 0.999999893 1 0.999999947 7.07E-08 Tsp39D FBtr0273404 21356804 21358271 2L + 21356898 21356965 3'utr Tsp39D FlyBase G5903.1 TATTTTACATGCCCATTGAAGGCTGATTATCTTATTTATAACTAGATATATTATATTAATTTAATTTA 68 21356914 0.811831203 14 63 602 0.933333333 1.367976785 0.026666667 0.102941176 0.186666667 68 3 2 70 2L:21356898-21356965 6 Tsp39D FBtr0273404 21356804 21358271 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2L + 21356856 21356940 3'utr Tsp39D FlyBase G4584.1 GCTTCACAAGAACTATTACAAAAATGAAATCACAAAATATTCTATTTTACATGCCCATTGAAGGCTGATTATCTTATTTATAACT 50 21356914 0.979807676 7 43 410 0.861111111 1.315270435 0.027777778 0.36 0.555555556 50 8 2 62 2L:21356856-21356940 6 52.5 563 FBgn0032943 321.6666667 16.54333333 25.32333333 0.163212435 3.17348378 2.073186784 -1 -1 -1 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 2L 21357313 21357318 + 2L_21357313_21357318_+ 1 1 1 0 Tsp39D FBtr0273404 21356804 21358271 2L + 21357125 21357336 3'utr Tsp39D FlyBase G5905.1 TTTTAATGTTTGCTTGAATTTGTATGCCATATACAAATTTAAGTACGTTTTATTAAGGCTGTCACTTTGGTTCGATTTCCATTCATTCGTACTTCAATATTTCATATTATAATAAAGTGACCTTGTAGCGTTTATCTATGTACTACCTTTATTCACATAAAGAATGTTCGAAGGTATGTAGAGTGACGATGTGCATCTCTTTACAGTAAAAA 49 21357316 0.89632265 21 46 457 0.928571429 1.716003344 0.142857143 0.142857143 0.25 49 4 0 52 2L:21357125-21357336 6 Tsp39D FBtr0273404 21356804 21358271 ATGTGC 6mer3-8 dme-miR-305-3p 2L + 21357295 21357335 3'utr Tsp39D FlyBase G4587.1 AAGGTATGTAGAGTGACGATGTGCATCTCTTTACAGTAAAA 11 21357325 0.659094719 6 11 80 1 1.204119983 0.125 0.363636364 0.5625 11 0 0 16 2L:21357295-21357335 6 14 564 FBgn0032943 321.6666667 16.54333333 25.32333333 0.043523316 0.846262341 0.552849809 -3 -12 -7.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 21357585 21357590 + 2L_21357585_21357590_+ 1 1 1 0 Tsp39D FBtr0273404 21356804 21358271 2L + 21357555 21357606 3'utr Tsp39D FlyBase G5908.1 CGGAACCAAAACATTATCAAATAAAACTAATGATCTGTAAAAATATTTGTAT 24 21357585 0.962892583 4 24 125 1 1.505149978 0 0.25 0.4375 24 0 0 32 2L:21357555-21357606 6 Tsp39D FBtr0273404 21356804 21358271 TGATCT 6mer3-8 dme-bantam-3p 2L + 21357567 21357597 3'utr Tsp39D FlyBase G4589.1 ATTATCAAATAAAACTAATGATCTGTAAAAA 9 21357585 0.731309113 2 9 48 1 1 0 0.111111111 0.2 9 0 0 10 2L:21357567-21357597 6 16 565 FBgn0032943 321.6666667 16.54333333 25.32333333 0.049740933 0.967156962 0.631828353 0 0 0 0.01 dme-miR-282-5p 6mer2-7 GAGGCT 2L 21358089 21358094 + 2L_21358089_21358094_+ 1 1 1 0 Tsp39D FBtr0273404 21356804 21358271 2L + 21358030 21358108 3'utr Tsp39D FlyBase G5912.1 ATATACCTAAATATATCGAATTTACAATTTTCATATCGACTTATATGTAGATTAACTTCGAGGCTTTACAATAAAACAA 43 21358095 0.985229093 6 41 339 0.960784314 1.389166084 0.019607843 0.11627907 0.254901961 43 1 1 49 2L:21358030-21358108 6 Tsp39D FBtr0273404 21356804 21358271 GAGGCT 6mer2-7 dme-miR-282-5p 2L + 21358066 21358106 3'utr Tsp39D FlyBase G4590.1 CGACTTATATGTAGATTAACTTCGAGGCTTTACAATAAAAC 28 21358095 0.781068908 4 27 222 0.97826087 1.653212514 0 0.392857143 0.630434783 28 1 0 45 2L:21358066-21358106 6 35 566 FBgn0032943 321.6666667 16.54333333 25.32333333 0.10880829 2.115655853 1.382124523 -6 -6 -6 0.01 dme-miR-1006-3p 6mer2-7 GAATTT 2L 2137598 2137603 - 2L_2137598_2137603_- 1 1 1 0 tho2 FBtr0077853|FBtr0334814|FBtr0301660 2137348|2137348|2137348 2137668|2137668|2137668 2L - 2137564 2137662 3'utr tho2 FlyBase G6924.1 TCCGGGCTTTTGCTTGCCCGTTCCGTGCATTGTGAAGCGCATTTTGTTTAACTTTTAAAGAATTTGGAATGGCCTTTCCATCCATTGTAGCAAAGAACG 13 2137587 0.986611339 6 13 116 1 1.113943352 0 0 0 13 0 0 13 2L:2137564-2137662 6 tho2 FBtr0077853|FBtr0334814|FBtr0301660 2137348|2137348|2137348 2137668|2137668|2137668 GAATTT 6mer2-7 dme-miR-1006-3p 2L - 2137560 2137599 3'utr tho2 FlyBase G5411.1 TTGGAATGGCCTTTCCATCCATTGTAGCAAAGAACGAAAC 6 2137587 0.972261298 3 6 37 1 1 0.2 0.333333333 0.6 6 0 0 10 2L:2137560-2137599 2 3.5 567 FBgn0031390 1017.133333 22.60333333 34.56333333 0.003441043 0.154844418 0.101263381 -16 -16 -16 0.01 dme-miR-7-5p 7mer-A1 TCTTCCA 2L 2156563 2156569 - 2L_2156563_2156569_- 0.823349562 0.823349562 0.823349562 0 aop FBtr0077850|FBtr0330658|FBtr0077851 2156482|2156482|2156482 2158164|2158164|2158164 2L - 2156518 2156786 3'utr aop FlyBase G6954.1 TTGAAGCACTTTATTAATTACATTAAACGGAATGAACAGAGTTAGGAGAAGATATCATCGCTGCACGTTCATACAATTAGCCTGTAGTGCAACTGTAATTATTAATTATTGTGTAGATCTACGCTAAAGTTAATTTTCTATTTGTTTTTCGTACGCCTTAAGTTTAAACACCGCCAATAGCTAATAATTAGCACTCTAGTGTCGCCACAATACCTGTTCTTCCATTGAAAACGTTATCTTTCGATCAATACATAATTTATATATGTATA 166 2156570 0.986510365 32 163 1204 0.984615385 1.982271233 0.179487179 0.138554217 0.266666667 166 2 1 192 2L:2156518-2156786 7 aop FBtr0077851|FBtr0330658|FBtr0077850 2156482|2156482|2156482 2158164|2158164|2158164 TCTTCCA 7mer-A1 dme-miR-7-5p 2L - 2156529 2156643 3'utr aop FlyBase G5437.1 GTTTTTCGTACGCCTTAAGTTTAAACACCGCCAATAGCTAATAATTAGCACTCTAGTGTCGCCACAATACCTGTTCTTCCATTGAAAACGTTATCTTTCGATCAATACATAATTT 76 2156570 0.776862656 17 76 540 1 2.033423755 0.12037037 0.368421053 0.555555556 76 0 0 108 2L:2156529-2156643 7 91 568 FBgn0000097 634.18 16.10666667 24.79666667 0.143492384 5.649834437 3.669848098 1 1 1 0.01 dme-miR-980-5p 8mer-A1 GAAAAACA 2L 2157057 2157064 - 2L_2157057_2157064_- 0.639886926 0.639886926 0.639886926 0 aop FBtr0077850|FBtr0330658|FBtr0330659|FBtr0077851 2156482|2156482|2156790|2156482 2158164|2158164|2158164|2158164 2L - 2156970 2157134 5'utr aop FlyBase G6955.2 AAAGAGCTTTCAAAATTCAATTTCAATTGAGCCCCTAGCCCTAGATACACTGCAACAAGAAACACGGATAGAAAAACATTGGCTTCCATTTTAATATAGCAATGATGATACACACAAGCATATATGTATACACATTAGTTTTCTATTGCTCTTAATTTTATTTTT 110 2157056 0.983029803 15 107 858 0.976377953 2.093421685 0.165354331 0.127272727 0.244094488 110 3 0 124 2L:2156970-2157134 8 aop FBtr0330659|FBtr0077851|FBtr0330658|FBtr0077850 2156790|2156482|2156482|2156482 2158164|2158164|2158164|2158164 GAAAAACA 8mer-A1 dme-miR-980-5p 2L - 2156966 2157077 5'utr aop FlyBase G5440.1 AGAAACACGGATAGAAAAACATTGGCTTCCATTTTAATATAGCAATGATGATACACACAAGCATATATGTATACACATTAGTTTTCTATTGCTCTTAATTTTATTTTTATTA 76 2157056 0.985104175 11 75 616 0.990291262 2.008600172 0.281553398 0.289473684 0.475728155 76 1 0 102 2L:2156966-2157077 8 76.5 569 FBgn0000097 634.18 16.10666667 24.79666667 0.120628213 4.749586093 3.085092082 -8 -8 -8 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 2157269 2157275 - 2L_2157269_2157275_- 0.801970437 0.801970437 0.801970437 0 aop FBtr0077850|FBtr0077850|FBtr0077850|FBtr0330658|FBtr0330658|FBtr0330658|FBtr0330659|FBtr0330659|FBtr0330659|FBtr0077851|FBtr0077851|FBtr0077851 2156482|2156482|2156482|2156482|2156482|2156482|2156790|2156790|2156790|2156482|2156482|2156482 2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164 2L - 2157214 2157287 5'utr aop FlyBase G6956.1 AAATTGATTTCGTGTGATAACAACAGAATTATCTTTGATTCACATTGGCTGAATGCTAACGAAACCAGAGCAGT 12 2157282 0.977306607 11 12 78 1 1.255272505 0.055555556 0.333333333 0.555555556 12 0 0 18 2L:2157214-2157287 7 aop FBtr0330659|FBtr0330659|FBtr0330659|FBtr0077851|FBtr0077851|FBtr0077851|FBtr0330658|FBtr0330658|FBtr0330658|FBtr0077850|FBtr0077850|FBtr0077850 2156790|2156790|2156790|2156482|2156482|2156482|2156482|2156482|2156482|2156482|2156482|2156482 2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 2157222 2157288 5'utr aop FlyBase G5442.1 CAAATTGATTTCGTGTGATAACAACAGAATTATCTTTGATTCACATTGGCTGAATGCTAACGAAACC 14 2157283 0.98809634 8 11 102 0.833333333 0.698970004 0.166666667 0.5 0.708333333 14 1 3 20 2L:2157222-2157288 7 10 570 FBgn0000097 634.18 16.10666667 24.79666667 0.015768394 0.620860927 0.403280011 7 8 7.5 0.01 dme-miR-305-3p 8mer-A1 ATGTGCCA 2L 2157603 2157610 - 2L_2157603_2157610_- 0.61264775 0.612817969 0.612732859 0.00012042 aop FBtr0077850|FBtr0330660|FBtr0330658|FBtr0330659|FBtr0077851 2156482|2157425|2156482|2156790|2156482 2158164|2158164|2158164|2158164|2158164 2L - 2157588 2157859 3'utr aop FlyBase G6958.1 AATTCAATTCTTGATCAAAGGCTTCTTCTAACCATTGCTGCTTTATACTTTCTTTGCGGCTGTCAAACGACCTTTCCGACTTTCTGTACATAGAAATCACATCTGCATAAACCAACAAACAATCATACATAAATACATTTATTTTATACATCAAGCGTATTTATTAAGCTAAGCTAAGCAAGAGCAGAGTGCATGTAATTTCGTTGTTGTAAGTAGATTTCTTGAGCCGGCGCAGCGCAGCCTTCGATTATGTGCCAATTTCTACATTTATC 54 2157611 0.985471234 31 49 409 0.869565217 1.477121255 0.202898551 0.148148148 0.333333333 54 8 1 60 2L:2157588-2157859 8 aop FBtr0330659|FBtr0077851|FBtr0330660|FBtr0330658|FBtr0077850 2156790|2156482|2157425|2156482|2156482 2158164|2158164|2158164|2158164|2158164 ATGTGCCA 8mer-A1 dme-miR-305-3p 2L - 2157584 2157694 3'utr aop FlyBase G5445.1 AAGCTAAGCTAAGCAAGAGCAGAGTGCATGTAATTTCGTTGTTGTAAGTAGATTTCTTGAGCCGGCGCAGCGCAGCCTTCGATTATGTGCCAATTTCTACATTTATCAAAC 32 2157637 0.965322325 13 30 157 0.976190476 1.311753861 0.166666667 0.28125 0.452380952 32 0 1 41 2L:2157584-2157694 8 9 571 FBgn0000097 634.18 16.10666667 24.79666667 0.014191554 0.558774834 0.36295201 1 27 14 0.01 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 2L 2158088 2158094 - 2L_2158088_2158094_- 0.823349562 0.823349562 0.823349562 0 aop FBtr0077850|FBtr0330660|FBtr0330658|FBtr0330659|FBtr0077851 2156482|2157425|2156482|2156790|2156482 2158164|2158164|2158164|2158164|2158164 2L - 2157949 2158132 3'utr aop FlyBase G6959.1 ACATCCATCTTCCACTCCCTCCTGAACACACACAACATTACCTGAGCTAAATAATGTGGGACCAGCACAACAAGCGCACAGACACATAGACAGACACTCTGCTGGATAAAATTCTGGATGCCTTTCGGTTAGGATGGGTCGCTTAGAATGCAATCGAAACGGAAAACTCATTATTGAAGATTGT 415 2158095 0.99054615 24 393 1572 0.943248532 1.382017043 0.113502935 0.180722892 0.334637965 415 10 19 482 2L:2157949-2158132 7 aop FBtr0330659|FBtr0077851|FBtr0330660|FBtr0330658|FBtr0077850 2156790|2156482|2157425|2156482|2156482 2158164|2158164|2158164|2158164|2158164 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2L - 2158020 2158213 stop_codon aop FlyBase G5448.1 TTGCAATGGCGGCGAGTCGGAGGACTCCTTCCGACACATGCAGCAGTAGGAGGAGAAGTGTCCTGAGACAATCACCGCACTACATCCATCTTCCACTCCCTCCTGAACACACACAACATTACCTGAGCTAAATAATGTGGGACCAGCACAACAAGCGCACAGACACATAGACAGACACTCTGCTGGATAAAATT 228 2158095 0.977614159 18 212 806 0.949295775 2.050508646 0.098591549 0.399122807 0.614084507 228 16 2 337 2L:2158020-2158213 7 182 572 FBgn0000097 634.18 16.10666667 24.79666667 0.286984768 11.29966887 7.339696196 1 1 1 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2L 21614804 21614809 - 2L_21614804_21614809_- 1 1 1 0 CG2201 FBtr0305503|FBtr0085922|FBtr0085921|FBtr0345685|FBtr0085923 21614230|21614764|21614764|21614764|21614764 21614977|21614977|21614977|21614977|21614977 2L - 21614790 21614823 3'utr CG2201 FlyBase G12226.1 TCGAACTACTTTAAAAGACTATTAAAATTTGTAA 12 21614802 0.679622164 4 11 80 0.947368421 1.255272505 0.263157895 0.333333333 0.578947368 12 1 0 18 2L:21614790-21614823 6 CG2201 FBtr0085923|FBtr0085921|FBtr0345685|FBtr0305503|FBtr0085922 21614764|21614764|21614764|21614230|21614764 21614977|21614977|21614977|21614977|21614977 AAGACT 6mer3-8 dme-miR-14-3p 2L - 21614795 21614823 3'utr CG2201 FlyBase G9363.1 TCGAACTACTTTAAAAGACTATTAAAATT 11 21614802 0.703262973 3 9 73 0.833333333 0.698970004 0 0.090909091 0.166666667 11 1 1 10 2L:21614795-21614823 6 11.5 573 FBgn0032955 595.71 31.05 47.65333333 0.019304695 0.37037037 0.241326245 -7 -7 -7 0.01 dme-bantam-3p 6mer2-7 GATCTC 2L 21616746 21616751 - 2L_21616746_21616751_- 1 1 1 0 CG2201 FBtr0100511 21616669 21617273 2L - 21616737 21616771 3'utr CG2201 FlyBase G12232.1 CAGAATATACGTTTCAAAAAGATCTCTTTTCAAAA 10 21616745 0.878922512 4 10 80 1 1.204119983 0.0625 0.4 0.625 10 0 0 16 2L:21616737-21616771 6 CG2201 FBtr0100511 21616669 21617273 GATCTC 6mer2-7 dme-bantam-3p 2L - 21616738 21616763 3'utr CG2201 FlyBase G9368.1 ACGTTTCAAAAAGATCTCTTTTCAAA 7 21616745 0.673251725 2 7 55 1 0.903089987 0 0.142857143 0.25 7 0 0 8 2L:21616738-21616763 6 8.5 574 FBgn0032955 595.71 31.05 47.65333333 0.014268688 0.273752013 0.178371572 -6 -6 -6 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 21647061 21647066 + 2L_21647061_21647066_+ 1 1 1 0 Ac3 FBtr0085897 21646824 21647964 2L + 21647045 21647071 3'utr Ac3 FlyBase G5932.1 TGCTTTTGTAAACTGTGTACCTAAAAC 12 21647060 0.753637546 3 11 85 0.933333333 0.84509804 0 0.25 0.4 12 0 1 14 2L:21647045-21647071 6 Ac3 FBtr0085897 21646824 21647964 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 21647037 21647072 3'utr Ac3 FlyBase G4605.1 AATAGATTTGCTTTTGTAAACTGTGTACCTAAAACA 9 21647060 0.917437236 2 9 56 1 1.146128036 0 0.444444444 0.642857143 9 0 0 14 2L:21647037-21647072 6 10 575 FBgn0023416 614.5733333 23.08666667 35.21333333 0.016271451 0.433150448 0.28398334 1 1 1 0.01 dme-miR-980-3p 7mer-A1 GCAGCTA 2L 21647196 21647202 + 2L_21647196_21647202_+ 0.823349562 0.823349562 0.823349562 0 Ac3 FBtr0085897 21646824 21647964 2L + 21647167 21647216 3'utr Ac3 FlyBase G5933.1 AGCTCTGTAATATTTAAGTGATTCGCTTTGCAGCTAATTGATGTGCAGAT 62 21647194 0.78478928 6 59 620 0.955882353 1.511883361 0.352941176 0.080645161 0.161764706 62 2 1 65 2L:21647167-21647216 7 Ac3 FBtr0085897 21646824 21647964 GCAGCTA 7mer-A1 dme-miR-980-3p 2L + 21647170 21647216 3'utr Ac3 FlyBase G4606.1 TCTGTAATATTTAAGTGATTCGCTTTGCAGCTAATTGATGTGCAGAT 41 21647193 0.796142289 5 41 432 1 1.755874856 0.333333333 0.268292683 0.473684211 41 0 0 57 2L:21647170-21647216 7 51.5 576 FBgn0023416 614.5733333 23.08666667 35.21333333 0.083797974 2.230724805 1.462514199 2 3 2.5 0.01 dme-miR-8-3p 6mer2-7 AGTATT 2L 21663973 21663978 - 2L_21663973_21663978_- 1 0.999999967 0.999999983 0 CG2225 FBtr0085917|FBtr0304885|FBtr0085915|FBtr0085914|FBtr0332967|FBtr0100618|FBtr0085918 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 2L - 21663921 21663991 3'utr CG2225 FlyBase G12239.1 TCAGCGACTTAAAAGTATTTTTTATTTATTCCGTTCAATGAACTAGTGTTATTTGATATAGGAAGTTAATA 28 21663963 0.782821586 8 26 320 0.972222222 1.544068044 0.055555556 0.178571429 0.361111111 28 1 0 35 2L:21663921-21663991 6 CG2225 FBtr0100618|FBtr0085918|FBtr0085914|FBtr0332967|FBtr0304885|FBtr0085915|FBtr0085917 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 AGTATT 6mer2-7 dme-miR-8-3p 2L - 21663937 21663991 3'utr CG2225 FlyBase G9375.1 TCAGCGACTTAAAAGTATTTTTTATTTATTCCGTTCAATGAACTAGTGTTATTTG 17 21663963 0.757007939 5 17 169 1 1.361727836 0.086956522 0.176470588 0.391304348 17 0 0 23 2L:21663937-21663991 6 6.5 577 FBgn0032957 1484.293333 32.49333333 50.1 0.004379188 0.200041034 0.129740519 -15 -15 -15 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2L 21664320 21664326 - 2L_21664320_21664326_- 0.823349562 0.823349562 0.823349562 0 CG2225 FBtr0085917|FBtr0304885|FBtr0085915|FBtr0085914|FBtr0332967|FBtr0100618|FBtr0085918 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 2L - 21664178 21664371 3'utr CG2225 FlyBase G12241.1 GAAGTTGAGTGGTTGGAAAGGAAAATTGCAATATGTAAACGTTTACTAGTCATTAAATATAAAAAATGAACCATAAAAAATGTATAAGAAAGATAACATATTTTTTATTAACACTCAGTGGATGCCAAAAACATAAATATTGGAATCATTTTATCAGCGGGAGCTGTGGCACTCAAAAACAAGATAAAATTATT 108 21664328 0.983677919 21 99 767 0.9375 1.77815125 0.2578125 0.157407407 0.2890625 108 7 1 120 2L:21664178-21664371 7 CG2225 FBtr0100618|FBtr0085918|FBtr0085914|FBtr0332967|FBtr0304885|FBtr0085915|FBtr0085917 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 21664296 21664373 3'utr CG2225 FlyBase G9377.1 ATGAAGTTGAGTGGTTGGAAAGGAAAATTGCAATATGTAAACGTTTACTAGTCATTAAATATAAAAAATGAACCATAA 51 21664319 0.87925287 9 41 369 0.829268293 1.355387658 0.317073171 0.450980392 0.658536585 51 12 2 68 2L:21664296-21664373 7 59 578 FBgn0032957 1484.293333 32.49333333 50.1 0.039749555 1.815757078 1.177644711 2 -7 -2.5 0.01 dme-miR-304-5p 8mer-A1 TGAGATTA 2L 21664568 21664575 - 2L_21664568_21664575_- 0.625363359 0.625363359 0.625363359 0 CG2225 FBtr0085917|FBtr0304885|FBtr0085915|FBtr0085914|FBtr0332967|FBtr0100618|FBtr0085918 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 2L - 21664480 21664599 3'utr CG2225 FlyBase G12242.1 GAGTGCAACACAGGAAAATCAAGTTGAGATTATAAAAAAATTCTTAAAACTGATACGTATAGAATTTCCAAAAACTGAAACAGAATGAAGTTAAACCCTCCACATTTTAACGAATGTTTG 39 21664576 0.968466409 6 39 217 1 1.643452676 0.090909091 0.128205128 0.227272727 39 0 0 44 2L:21664480-21664599 8 CG2225 FBtr0100618|FBtr0085918|FBtr0085914|FBtr0332967|FBtr0304885|FBtr0085915|FBtr0085917 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 TGAGATTA 8mer-A1 dme-miR-304-5p 2L - 21664530 21664589 3'utr CG2225 FlyBase G9378.1 CAGGAAAATCAAGTTGAGATTATAAAAAAATTCTTAAAACTGATACGTATAGAATTTCCA 33 21664576 0.791235382 5 33 180 1 1.69019608 0.142857143 0.363636364 0.571428571 33 0 0 49 2L:21664530-21664589 8 31 579 FBgn0032957 1484.293333 32.49333333 50.1 0.02088536 0.954041855 0.618762475 1 1 1 0.01 dme-miR-14-3p 8mer-A1 AAGACTGA 2L 21665191 21665198 - 2L_21665191_21665198_- 0.643565469 0.643565469 0.643565469 0 CG2225 FBtr0085917|FBtr0304885|FBtr0085915|FBtr0085914|FBtr0332967|FBtr0100618|FBtr0085918 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 2L - 21665183 21665242 3'utr CG2225 FlyBase G12245.1 GAAGACAATTGGAAAATTCAAATGCACAAAAGCCGTGAATCGTAAAGACTGACAATGAAA 21 21665200 0.940429867 3 20 79 0.958333333 1.361727836 0.375 0.142857143 0.25 21 1 0 23 2L:21665183-21665242 8 CG2225 FBtr0100618|FBtr0085918|FBtr0085914|FBtr0332967|FBtr0304885|FBtr0085915|FBtr0085917 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 AAGACTGA 8mer-A1 dme-miR-14-3p 2L - 21665179 21665223 3'utr CG2225 FlyBase G9381.1 AAATGCACAAAAGCCGTGAATCGTAAAGACTGACAATGAAAAAAA 12 21665200 0.943823986 4 11 40 0.85 1.230448921 0.35 0.333333333 0.6 12 3 0 17 2L:21665179-21665223 8 14.5 580 FBgn0032957 1484.293333 32.49333333 50.1 0.009768959 0.446245384 0.289421158 2 2 2 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC 2L 21665290 21665296 - 2L_21665290_21665296_- 0.661615645 0.661615645 0.661615645 0 CG2225 FBtr0085917|FBtr0304885|FBtr0085915|FBtr0085914|FBtr0332967|FBtr0100618|FBtr0085918 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 2L - 21665274 21665347 3'utr CG2225 FlyBase G12246.1 ATCTTTGCACTCACCTAGTCACTCACCTGCTCATTCGATCAGCAAAGCGCTTGTGTTCGTTCGCCTTGAAAAAA 34 21665297 0.894278006 8 32 241 0.951219512 1.290034611 0.146341463 0.176470588 0.317073171 34 1 1 39 2L:21665274-21665347 7 CG2225 FBtr0100618|FBtr0085918|FBtr0085914|FBtr0332967|FBtr0304885|FBtr0085915|FBtr0085917 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 TGTGTTC 7mer-m8 dme-miR-317-3p 2L - 21665270 21665381 3'utr CG2225 FlyBase G9382.1 CATTAACTTCTATCGGGTCGAAACCTGCCAGTTCATCTTTGCACTCACCTAGTCACTCACCTGCTCATTCGATCAGCAAAGCGCTTGTGTTCGTTCGCCTTGAAAAAATACA 23 21665297 0.983318551 10 23 167 1 1.51851394 0.121212121 0.260869565 0.484848485 23 0 0 33 2L:21665270-21665381 7 22 581 FBgn0032957 1484.293333 32.49333333 50.1 0.014821868 0.677061961 0.439121756 1 1 1 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 21678058 21678063 - 2L_21678058_21678063_- 1 1 1 0 EF2 FBtr0332966 21677911 21678310 2L - 21678049 21678079 3'utr EF2 FlyBase G12261.1 AAATCAGAGCGCCGCTATGTGACTGACACGA 6 21678061 0.579204898 3 5 21 0.833333333 0.698970004 0.166666667 0 0 6 1 0 5 2L:21678049-21678079 6 EF2 FBtr0332966 21677911 21678310 ATGTGA 6mer3-8 dme-miR-1003-3p 2L - 21678050 21678084 3'utr EF2 FlyBase G9388.1 TACATAAATCAGAGCGCCGCTATGTGACTGACACG 14 21678062 0.905374703 2 14 45 1 1.414973348 0.115384615 0.5 0.730769231 14 0 0 26 2L:21678050-21678084 6 10 582 FBgn0000559 36020.00333 1557.58 2372.66 0.000277624 0.006420216 0.004214679 -2 -1 -1.5 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 2L 21728586 21728591 + 2L_21728586_21728591_+ 1 1 1 0 CG31619 FBtr0085901|FBtr0339131|FBtr0110959|FBtr0339132|FBtr0307497|FBtr0301000 21728172|21728122|21728172|21728172|21728172|21728172 21729051|21729051|21729051|21729051|21729051|21729051 2L + 21728554 21728605 3'utr CG31619 FlyBase G5974.1 TGACATCCATTGTCGGTTCATAGCACTGAAATTAGCTTCGATTACCACTTAG 29 21728574 0.71678821 5 28 215 0.970588235 1.217483944 0.147058824 0.137931034 0.264705882 29 0 1 33 2L:21728554-21728605 6 CG31619 FBtr0339132|FBtr0110959|FBtr0339131|FBtr0085901|FBtr0301000|FBtr0307497 21728172|21728172|21728122|21728172|21728172|21728172 21729051|21729051|21729051|21729051|21729051|21729051 TAGCTT 6mer3-8 dme-miR-79-3p 2L + 21728562 21728601 3'utr CG31619 FlyBase G4638.1 ATTGTCGGTTCATAGCACTGAAATTAGCTTCGATTACCAC 13 21728586 0.72101481 6 12 83 0.944444444 1.230448921 0.055555556 0.307692308 0.5 13 1 0 17 2L:21728562-21728601 6 16.5 583 FBgn0051619 2354.866667 61.1 93.72666667 0.007006766 0.2700491 0.176043815 12 0 6 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 2L 21729007 21729013 + 2L_21729007_21729013_+ 0.782911824 0.782911824 0.782911824 0 CG31619 FBtr0085901|FBtr0339131|FBtr0110959|FBtr0339132|FBtr0307497|FBtr0301000 21728172|21728122|21728172|21728172|21728172|21728172 21729051|21729051|21729051|21729051|21729051|21729051 2L + 21728991 21729019 3'utr CG31619 FlyBase G5977.1 AAATTTGAGATGCATTGTACAAAAATTGG 12 21729005 0.712881828 2 11 64 1 1.113943352 0.307692308 0.083333333 0.153846154 12 0 0 13 2L:21728991-21729019 7 CG31619 FBtr0339132|FBtr0110959|FBtr0339131|FBtr0085901|FBtr0301000|FBtr0307497 21728172|21728172|21728122|21728172|21728172|21728172 21729051|21729051|21729051|21729051|21729051|21729051 GTACAAA 7mer-A1 dme-miR-305-5p 2L + 21728989 21729022 3'utr CG31619 FlyBase G4640.1 ACAAATTTGAGATGCATTGTACAAAAATTGGAAC 7 21729005 0.971409473 3 5 36 0.8 0.903089987 0.2 0.428571429 0.6 7 2 0 8 2L:21728989-21729022 7 8.5 584 FBgn0051619 2354.866667 61.1 93.72666667 0.003609546 0.139116203 0.090689238 2 2 2 0.01 dme-miR-252-5p 6mer3-8 GTACTT 2L 21740122 21740127 - 2L_21740122_21740127_- 1 1 1 0 step FBtr0332471 21740039 21741582 2L - 21740098 21740195 3'utr step FlyBase G12273.1 AGAAATAAAAAATGTTTATGTATCGTGATGTTGAATATAAAGGACGGCGGTAAATATAGTGTAGATTAGTACTTTGTATACTTTGCTTTAAAACTAAT 37 21740113 0.928595853 13 34 339 0.869565217 1.602059991 0.195652174 0.189189189 0.347826087 37 6 0 40 2L:21740098-21740195 6 step FBtr0332471 21740039 21741582 GTACTT 6mer3-8 dme-miR-252-5p 2L - 21740101 21740185 3'utr step FlyBase G9400.1 AATGTTTATGTATCGTGATGTTGAATATAAAGGACGGCGGTAAATATAGTGTAGATTAGTACTTTGTATACTTTGCTTTAAAACT 29 21740113 0.754729496 13 25 264 0.846153846 1.217483944 0.205128205 0.206896552 0.41025641 29 5 1 33 2L:21740101-21740185 6 8 585 FBgn0086779 2401.73 84.77 129.5966667 0.003330932 0.094373009 0.061729983 -14 -14 -14 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG 2L 21740333 21740338 - 2L_21740333_21740338_- 0.999998228 0.999517886 0.999758057 0.000339623 step FBtr0332471 21740039 21741582 2L - 21740316 21740384 3'utr step FlyBase G12275.1 AATTGCAATATTATAAATACTTTAGTTTGATTTGTACATATACACTGCTGTGCACTATCCATTTCGTAT 8 21740338 0.979079289 6 8 66 1 1.113943352 0.153846154 0.5 0.692307692 8 0 0 13 2L:21740316-21740384 6 step FBtr0332471 21740039 21741582 GCTGTG 6mer2-7 dme-miR-1008-3p 2L - 21740322 21740363 3'utr step FlyBase G9402.1 TTAGTTTGATTTGTACATATACACTGCTGTGCACTATCCATT 7 21740338 0.741299185 5 7 56 1 1.041392685 0.090909091 0.428571429 0.636363636 7 0 0 11 2L:21740322-21740363 6 5.5 586 FBgn0086779 2401.73 84.77 129.5966667 0.002290016 0.064881444 0.042439363 0 0 0 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 2L 21740514 21740520 - 2L_21740514_21740520_- 0.823080187 0.823272126 0.823176157 0.000135694 step FBtr0332471 21740039 21741582 2L - 21740505 21740702 3'utr step FlyBase G12276.2 AAGAATGTATAAATTGCCCGTTGATGTGTAAGCAAAAAACTATAAGTCAAAAAATCATCAAACAAGAACTCTGTTGCCAGCACTGATTTTATAGTAGCCTAAAGATGCTATTAGAAAATAGTTATAGTAAATTGTGTGTCGTGGCGCTGTGATATCATTGATAGGAAAGAGCTTCTGTGTTGAGACTGAAAAAACATT 859 21740523 0.81204467 35 833 5454 0.968335036 2.374748346 0.233912155 0.124563446 0.231869254 859 28 3 948 2L:21740505-21740702 7 step FBtr0332471 21740039 21741582 AGACTGA 7mer-A1 dme-miR-14-3p 2L - 21740505 21740649 3'utr step FlyBase G9404.1 ATCATCAAACAAGAACTCTGTTGCCAGCACTGATTTTATAGTAGCCTAAAGATGCTATTAGAAAATAGTTATAGTAAATTGTGTGTCGTGGCGCTGTGATATCATTGATAGGAAAGAGCTTCTGTGTTGAGACTGAAAAAACATT 500 21740523 0.732976311 24 482 3131 0.966942149 2.147367108 0.252066116 0.34 0.545454545 500 20 4 702 2L:21740505-21740649 7 610 587 FBgn0086779 2401.73 84.77 129.5966667 0.253983587 7.195941961 4.706911186 3 3 3 0.01 dme-miR-1006-3p 6mer2-7 GAATTT 2L 21740913 21740918 - 2L_21740913_21740918_- 1 1 1 0 step FBtr0332471 21740039 21741582 2L - 21740825 21740971 3'utr step FlyBase G12277.1 TTAATAAATGCAATTCTTAAATTAGTTTAGACGGCAAATTATGTTCTTTCTGAGAATTTGGACTACGTGACATAGTTTTTATTGAACCAAAGATCGAATTTAAACTATTATTACTATCAATACCAACTTTCACCACAATACACACTT 731 21740913 0.985530995 25 717 5952 0.976640712 2.244524512 0.071190211 0.191518468 0.342602892 731 17 4 878 2L:21740825-21740971 6 step FBtr0332471 21740039 21741582 GAATTT 6mer2-7 dme-miR-1006-3p 2L - 21740831 21740953 3'utr step FlyBase G9406.1 AAATTAGTTTAGACGGCAAATTATGTTCTTTCTGAGAATTTGGACTACGTGACATAGTTTTTATTGAACCAAAGATCGAATTTAAACTATTATTACTATCAATACCAACTTTCACCACAATAC 485 21740913 0.793076961 25 476 3743 0.987359551 2.36983407 0.077247191 0.364948454 0.56741573 485 7 2 703 2L:21740831-21740953 6 563 588 FBgn0086779 2401.73 84.77 129.5966667 0.23441436 6.641500531 4.344247537 -5 -5 -5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2L 21760633 21760638 + 2L_21760633_21760638_+ 1 1 1 0 CG1416 FBtr0085903|FBtr0085904|FBtr0085905 21760622|21760622|21760622 21761000|21760915|21760915 2L + 21760610 21760755 stop_codon CG1416 FlyBase G5988.1 CTGATGCCTTATAAGAGGACGCTTCTAGTGCGGATTGCACTGAATGATTGAGGGCTTGGTGTATGGCGGATTATCGAAGGATTATTATTTGTATTCAACCTAGAGTACTGCGAGAATTTCATTTCCAATCATAACTGTAATTTCTG 33 21760658 0.987203881 14 28 245 0.9 1.556302501 0.3 0.181818182 0.325 33 4 0 36 2L:21760610-21760755 6 CG1416 FBtr0085905|FBtr0085903|FBtr0085904 21760622|21760622|21760622 21760915|21761000|21760915 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2L + 21760623 21760710 3'utr CG1416 FlyBase G4649.1 AGAGGACGCTTCTAGTGCGGATTGCACTGAATGATTGAGGGCTTGGTGTATGGCGGATTATCGAAGGATTATTATTTGTATTCAACCT 15 21760658 0.97740607 8 15 102 1 1.255272505 0.111111111 0.2 0.333333333 15 0 0 18 2L:21760623-21760710 6 5 589 FBgn0032961 1407.876667 113.9066667 174.8766667 0.003551447 0.043895587 0.028591579 -25 -25 -25 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2L 21836980 21836985 + 2L_21836980_21836985_+ 1 1 1 0 tsh FBtr0085906|FBtr0085906|FBtr0085906 21836181|21836181|21836181 21837011|21837011|21837011 2L + 21836939 21837002 3'utr tsh FlyBase G6008.1 CATGCCAAGGCGAAAAGATATAAAATTGGATAAGAAAACATTGTGATCAAATACAAGATAAAAG 249 21836979 0.954628108 5 238 1092 0.96039604 1.50965048 0.00660066 0.176706827 0.323432343 249 4 8 291 2L:21836939-21837002 6 tsh FBtr0085906|FBtr0085906|FBtr0085906 21836181|21836181|21836181 21837011|21837011|21837011 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 21836938 21837002 3'utr tsh FlyBase G4666.1 ACATGCCAAGGCGAAAAGATATAAAATTGGATAAGAAAACATTGTGATCAAATACAAGATAAAAG 224 21836979 0.955795549 5 213 992 0.952095808 1.461034435 0.005988024 0.361607143 0.571856287 224 6 10 318 2L:21836938-21837002 6 234 590 FBgn0003866 1100.013333 28.07333333 43.04 0.212724694 8.335312277 5.436802974 1 1 1 0.01 dme-miR-190-5p 8mer-A1 ACATATCA 2L 2210047 2210054 - 2L_2210047_2210054_- 0.612817321 0.612817321 0.612817321 0 CG15385 FBtr0077845|FBtr0331649 2209572|2209944 2210248|2210248 2L - 2210020 2210070 3'utr CG15385 FlyBase G6989.1 ACAAATCGAAAACGATACATATCAATGGAGCACTTGTTAGACTATAAGAAC 25 2210055 0.948275306 5 20 120 0.8125 1.414973348 0.15625 0.24 0.40625 25 6 0 26 2L:2210020-2210070 8 CG15385 FBtr0331649|FBtr0077845 2209944|2209572 2210248|2210248 ACATATCA 8mer-A1 dme-miR-190-5p 2L - 2210037 2210069 3'utr CG15385 FlyBase G5475.1 CAAATCGAAAACGATACATATCAATGGAGCACT 8 2210055 0.857112441 2 8 30 1 1.146128036 0.214285714 0.625 0.785714286 8 0 0 14 2L:2210037-2210069 8 15.5 591 FBgn0031397 4.333333333 0.213333333 0.323333333 3.576923077 72.65625 47.93814433 1 1 1 0.01 dme-miR-2535b-3p 6mer3-8 CCGTGA 2L 22125077 22125082 + 2L_22125077_22125082_+ 1 1 1 0 CG3651 FBtr0331655|FBtr0331656|FBtr0331657 22124938|22124938|22124938 22125151|22125120|22126614 2L + 22125048 22125096 3'utr CG3651 FlyBase G6025.2 CTTCCATATTAAATCAGGTGATCGCATGGCCGTGACCCACCGCTTAAGT 194 22125074 0.884127704 9 193 704 0.99543379 2.338456494 0.155251142 0.097938144 0.200913242 194 1 0 218 2L:22125048-22125096 6 CG3651 FBtr0331657|FBtr0331655|FBtr0331656 22124938|22124938|22124938 22126614|22125151|22125120 CCGTGA 6mer3-8 dme-miR-2535b-3p 2L + 22125024 22125092 3'utr CG3651 FlyBase G4688.1 GTTTAATTTTTTTTAATAAGTCATCTTCCATATTAAATCAGGTGATCGCATGGCCGTGACCCACCGCTT 136 22125074 0.929743114 7 136 498 1 2.328379603 0.159624413 0.441176471 0.643192488 136 0 0 213 2L:22125024-22125092 6 163 592 FBgn0032974 1358.31 57.56666667 88.28333333 0.120002061 2.83149971 1.84632811 3 3 3 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG 2L 22125633 22125638 + 2L_22125633_22125638_+ 0.999404442 0.993662811 0.996533626 0.004059924 CG3651 FBtr0331657 22124938 22126614 2L + 22125606 22125664 3'utr CG3651 FlyBase G6026.1 AGTGCTTAAACTTTTCTCATAAGGCTGGCTGTGTTCTGCACGTCGTTCAAGGGCCGTGA 46 22125629 0.898311189 6 44 432 0.964285714 1.431363764 0.375 0.152173913 0.303571429 46 1 1 54 2L:22125606-22125664 6 CG3651 FBtr0331657 22124938 22126614 GCTGTG 6mer2-7 dme-miR-1008-3p 2L + 22125589 22125652 3'utr CG3651 FlyBase G4689.1 TTAACGACTGCAATCCAAGTGCTTAAACTTTTCTCATAAGGCTGGCTGTGTTCTGCACGTCGTT 24 22125631 0.988125073 8 23 207 0.90625 0.860338007 0.40625 0.208333333 0.40625 24 0 3 29 2L:22125589-22125652 6 33.5 593 FBgn0032974 1358.31 57.56666667 88.28333333 0.024663 0.58193399 0.379460072 4 2 3 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 2L 2212809 2212814 - 2L_2212809_2212814_- 1 1 1 0 Uch FBtr0303459|FBtr0077844|FBtr0330676 2212736|2212736|2212736 2212969|2212969|2212969 2L - 2212758 2212862 3'utr Uch FlyBase G6991.1 CCGCCTTTCAGCCGGTCAATAGTTTACGCATATTTATTCCGCATTGAGCCAAAGCCGCATATGTATTGGGAACACCATGATTGTTATTAAAGAGTGCACTCTAGC 19 2212785 0.976178799 12 18 119 0.95 1.278753601 0.2 0.052631579 0.1 19 1 0 19 2L:2212758-2212862 6 Uch FBtr0330676|FBtr0303459|FBtr0077844 2212736|2212736|2212736 2212969|2212969|2212969 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 2212763 2212826 3'utr Uch FlyBase G5477.1 TTCCGCATTGAGCCAAAGCCGCATATGTATTGGGAACACCATGATTGTTATTAAAGAGTGCACT 8 2212803 0.978270569 3 6 49 0.705882353 0.602059991 0.470588235 0.75 0.882352941 8 3 2 12 2L:2212763-2212826 6 6 594 FBgn0010288 838 99.6 152.0966667 0.007159905 0.060240964 0.039448596 -29 -11 -20 0.01 dme-miR-1012-3p 7mer-A1 TGACTAA 2L 22128505 22128511 - 2L_22128505_22128511_- 0.823349562 0.823349562 0.823349562 0 CycK FBtr0085941|FBtr0085942|FBtr0344022 22128262|22128262|22124283 22128520|22128520|22128520 2L - 22128493 22128653 stop_codon CycK FlyBase G12315.1 GGGAGTCCAGCAGACAGTGGTCGGACACTATAGCGGGAGCGCTGCACCACCACCACCAATGCCGCCTAGCTTGCCTCCAGGAGCCAGTGGATACTACAACGCCGGTGGGCGTCCATCGCAGCAGCGCTACTAGTAGATGCAATGACTAATAAACAAGTAAA 26 22128516 0.94457109 11 25 102 1 1.505149978 0.375 0.115384615 0.28125 26 0 0 32 2L:22128493-22128653 7 CycK FBtr0085941|FBtr0085942|FBtr0344022 22128262|22128262|22124283 22128520|22128520|22128520 TGACTAA 7mer-A1 dme-miR-1012-3p 2L - 22128489 22128538 stop_codon CycK FlyBase G9437.1 TCGCAGCAGCGCTACTAGTAGATGCAATGACTAATAAACAAGTAAAAAAA 14 22128516 0.916662662 4 14 63 1 1.230448921 0.235294118 0.214285714 0.352941176 14 0 0 17 2L:22128489-22128538 7 15 595 FBgn0025674 1467.203333 91.78 140.27 0.010223532 0.163434299 0.106936622 5 5 5 0.01 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 2L 22158795 22158800 + 2L_22158795_22158800_+ 1 0.999999992 0.999999996 0 CG42748 FBtr0333745|FBtr0303274|FBtr0303272|FBtr0333742|FBtr0303273|FBtr0303271 22157031|22158743|22158743|22158743|22156833|22158743 22159611|22161348|22159611|22159611|22159611|22159611 2L + 22158754 22158811 5'utr CG42748 FlyBase G6049.1 AGAGTAGAAATACTGGTAACCGGCAGTTTATGCTTTTTGTTTGGTGCACGGCATTTTT 8 22158795 0.991179188 3 6 69 0.888888889 0.903089987 0.111111111 0.125 0.222222222 8 1 0 8 2L:22158754-22158811 6 CG42748 FBtr0303274|FBtr0333745|FBtr0303271|FBtr0303273|FBtr0333742|FBtr0303272 22158743|22157031|22158743|22156833|22158743|22158743 22161348|22159611|22159611|22159611|22159611|22159611 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 2L + 22158783 22158828 5'utr CG42748 FlyBase G4706.1 ATGCTTTTTGTTTGGTGCACGGCATTTTTGTAGCCTATCTGCAAAC 7 22158811 0.970251608 5 7 64 1 1.176091259 0.2 0.571428571 0.8 7 0 0 15 2L:22158783-22158828 6 5 596 FBgn0261802 1164 24.91333333 38.18666667 0.004295533 0.200695745 0.130935754 0 -16 -8 0.01 dme-miR-184-5p 6mer2-7 GATAAG 2L 22166277 22166282 - 2L_22166277_22166282_- 1 1 1 0 Clamp FBtr0100407|FBtr0085964 22165718|22165964 22166551|22166551 2L - 22166226 22166411 3'utr Clamp FlyBase G12338.1 ATATATCACCACAATGATATTAAAGAATAGAAAACGATGTTCCATCGTTAACACTTCAGCTGCATATGTCCTTTCTCCACTTTCATGTGGGATCTTCAAAAATGGGCGAAACCCAAAAACGCTTTTTACGATAAGCATACAAATGAACCTAATTTATTTGATAGCTTGTATAATATACTTAAACAT 207 22166286 0.931790669 28 198 1369 0.948207171 1.899455702 0.131474104 0.178743961 0.322709163 207 11 2 238 2L:22166226-22166411 6 Clamp FBtr0085964|FBtr0100407 22165964|22165718 22166551|22166551 GATAAG 6mer2-7 dme-miR-184-5p 2L - 22166244 22166370 3'utr Clamp FlyBase G9452.2 CCATCGTTAACACTTCAGCTGCATATGTCCTTTCTCCACTTTCATGTGGGATCTTCAAAAATGGGCGAAACCCAAAAACGCTTTTTACGATAAGCATACAAATGAACCTAATTTATTTGATAGCTTG 123 22166286 0.915477747 22 115 751 0.968421053 1.963787827 0.121052632 0.422764228 0.626315789 123 5 1 184 2L:22166244-22166370 6 48 597 FBgn0032979 2178.656667 96.29333333 147.5566667 0.022031925 0.498476876 0.325298755 4 4 4 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 22166522 22166528 - 2L_22166522_22166528_- 0.656727722 0.658999465 0.657863593 0.001606405 Clamp FBtr0100407|FBtr0085964 22165718|22165964 22166551|22166551 2L - 22166476 22166668 stop_codon Clamp FlyBase G12340.1 AAGTACGGCCAAACTGCTCCTCGCCAGACCAGCAGCGATGGGATGATAGTGCATAAGCAGGAGATTCCTGACATGGAGGATGAGGCCCAACAGGAAGTGATTATCGGTGGGTTATAGATAGTTTAAATGCAGAGGTGACAGGCAGCTTAATGAAGTCACAGACACTGGAGTCCACCCTGCTTAGCTTCAGTTT 47 22166521 0.934894167 19 45 176 0.967213115 1.469822016 0.180327869 0.234042553 0.409836066 47 1 1 59 2L:22166476-22166668 7 Clamp FBtr0085964|FBtr0100407 22165964|22165718 22166551|22166551 GGCAGCT 7mer-m8 dme-miR-980-3p 2L - 22166493 22166639 stop_codon Clamp FlyBase G9454.1 CAGCAGCGATGGGATGATAGTGCATAAGCAGGAGATTCCTGACATGGAGGATGAGGCCCAACAGGAAGTGATTATCGGTGGGTTATAGATAGTTTAAATGCAGAGGTGACAGGCAGCTTAATGAAGTCACAGACACTGGAGTCCACC 41 22166521 0.95141308 17 40 175 0.966666667 1.763427994 0.3 0.365853659 0.566666667 41 2 0 58 2L:22166493-22166639 7 16.5 598 FBgn0032979 2178.656667 96.29333333 147.5566667 0.007573474 0.171351426 0.111821447 -7 -7 -7 0.01 dme-miR-278-3p 6mer3-8 CCCACC 2L 2220423 2220428 + 2L_2220423_2220428_+ 1 1 1 0 mio FBtr0077835 2220409 2220625 2L + 2220394 2220454 stop_codon mio FlyBase G1197.1 TGAGAGACATTTCCTAGCTGTCCGGAGCACCCACCATACACAGCCCTTACTCGCCCAGGCC 6 2220442 0.932306984 5 6 22 1 0.77815125 0.166666667 0 0 6 0 0 6 2L:2220394-2220454 6 mio FBtr0077835 2220409 2220625 CCCACC 6mer3-8 dme-miR-278-3p 2L + 2220406 2220454 stop_codon mio FlyBase G937.1 CCTAGCTGTCCGGAGCACCCACCATACACAGCCCTTACTCGCCCAGGCC 8 2220441 0.789471339 6 8 22 1 0.954242509 0 0.125 0.222222222 8 0 0 9 2L:2220406-2220454 6 3.5 599 FBgn0031399 136 5.556666667 8.516666667 0.025735294 0.629874025 0.410958904 -19 -18 -18.5 0.01 dme-miR-252-5p 8mer-m1 GTACTTAG 2L 2220526 2220533 + 2L_2220526_2220533_+ 0.636789085 0.636789085 0.636789085 0 mio FBtr0077835 2220409 2220625 2L + 2220463 2220553 3'utr mio FlyBase G1198.1 ATGCATTAAGTTGTTGATTTGTTCCAAACGCGTGCGCCTTAAACAAACTCAGAAGTGTTCATTGTACTTAGACAAGGGATGTGCCCGTAGC 29 2220524 0.757774811 7 26 191 0.948717949 1.267171728 0.153846154 0.172413793 0.384615385 29 1 1 37 2L:2220463-2220553 8 mio FBtr0077835 2220409 2220625 GTACTTAG 8mer-m1 dme-miR-252-5p 2L + 2220478 2220550 3'utr mio FlyBase G938.1 GATTTGTTCCAAACGCGTGCGCCTTAAACAAACTCAGAAGTGTTCATTGTACTTAGACAAGGGATGTGCCCGT 16 2220525 0.979047126 6 15 100 0.956521739 1.342422681 0.347826087 0.3125 0.52173913 16 1 0 22 2L:2220478-2220550 8 18.5 600 FBgn0031399 136 5.556666667 8.516666667 0.136029412 3.329334133 2.17221135 2 1 1.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2L 2225589 2225594 - 2L_2225589_2225594_- 1 1 1 0 CG15387 FBtr0113015 2225543 2225797 2L - 2225546 2225607 3'utr CG15387 FlyBase G6997.1 TCTGAAACAGGCCACCAAAATAGACTTAAGCTTGATATTCTTATAAAATGCATTTCTTTTGA 25 2225587 0.972255682 5 25 101 1 1.491361694 0.193548387 0.2 0.35483871 25 0 0 31 2L:2225546-2225607 6 CG15387 FBtr0113015 2225543 2225797 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 2225557 2225601 3'utr CG15387 FlyBase G5482.1 ACAGGCCACCAAAATAGACTTAAGCTTGATATTCTTATAAAATGC 12 2225587 0.96883937 2 10 46 0.894736842 1.230448921 0 0.416666667 0.631578947 12 2 0 17 2L:2225557-2225601 6 15.5 601 FBgn0031403 487 91.37333333 139.89 0.031827515 0.169633737 0.110801344 -7 -7 -7 0.01 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 2230248 2230254 + 2L_2230248_2230254_+ 0.823349562 0.823349562 0.823349562 0 sau FBtr0100673|FBtr0077840 2230125|2230125 2231099|2231088 2L + 2230223 2230279 3'utr sau FlyBase G1218.2 TTGCTGCTTTTGTTTTAGAAACTTTGCTGTGAGTGGAACCGAATCGGGCGATAGGAT 393 2230246 0.736067226 8 377 2570 0.972457627 1.883661435 0.527542373 0.152671756 0.294491525 393 8 5 459 2L:2230223-2230279 7 sau FBtr0100674|FBtr0077840|FBtr0100673 2230125|2230125|2230125 2230413|2231088|2231099 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L + 2230188 2230299 3'utr sau FlyBase G953.1 AACACAGAAATACAGACCCACATCTGGAATACATTTTGCTGCTTTTGTTTTAGAAACTTTGCTGTGAGTGGAACCGAATCGGGCGATAGGATTTTCTTAAATGGCAACCACC 288 2230246 0.974789341 16 282 1886 0.967667436 1.844062773 0.51039261 0.361111111 0.575057737 288 9 5 419 2L:2230188-2230299 7 328 602 FBgn0267378 3863.503333 238.82 367.2833333 0.084897041 1.373419312 0.893043518 2 2 2 0.01 dme-miR-184-5p 6mer3-8 TGATAA 2L 2230630 2230635 + 2L_2230630_2230635_+ 1 1 1 0 sau FBtr0100673|FBtr0077840 2230125|2230125 2231099|2231088 2L + 2230620 2230661 3'utr sau FlyBase G1219.1 AAGAAAACTTTGATAAAGTCTGGGCAAGCTGCGTGCGATTGT 8 2230633 0.949137054 3 8 44 1 0.903089987 0.125 0 0 8 0 0 8 2L:2230620-2230661 6 sau FBtr0077840|FBtr0100673 2230125|2230125 2231088|2231099 TGATAA 6mer3-8 dme-miR-184-5p 2L + 2230621 2230649 3'utr sau FlyBase G955.1 AGAAAACTTTGATAAAGTCTGGGCAAGCT 5 2230632 0.724736941 2 3 25 0.666666667 0.77815125 0.333333333 0.4 0.666666667 5 3 0 6 2L:2230621-2230649 6 5.5 603 FBgn0267378 3863.503333 238.82 367.2833333 0.001423578 0.023029897 0.014974815 -3 -2 -2.5 0.01 dme-miR-1003-3p 7mer-A1 TGTGAGA 2L 2231425 2231431 - 2L_2231425_2231431_- 0.823349562 0.823349562 0.823349562 0 Sec24CD FBtr0329964 2231104 2232047 2L - 2231394 2231434 3'utr Sec24CD FlyBase G7001.1 TCGTGTGAGAATTACTCGACTTATATGGTATATTGCCCCTT 5 2231411 0.976544323 3 4 42 1 0.84509804 0.142857143 0.2 0.428571429 5 0 0 7 2L:2231394-2231434 7 Sec24CD FBtr0329964 2231104 2232047 TGTGAGA 7mer-A1 dme-miR-1003-3p 2L - 2231393 2231429 3'utr Sec24CD FlyBase G5488.1 TGAGAATTACTCGACTTATATGGTATATTGCCCCTTC 5 2231412 0.975355028 4 5 38 1 1 0.2 0.6 0.8 5 0 0 10 2L:2231393-2231429 5 3 604 FBgn0262126 1107.336667 30.21333333 46.15333333 0.002709203 0.09929391 0.065000722 -20 -19 -19.5 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT 2L 2231884 2231889 - 2L_2231884_2231889_- 1 1 1 0 Sec24CD FBtr0329964|FBtr0077810 2231104|2231776 2232047|2232047 2L - 2231861 2232023 5'utr Sec24CD FlyBase G7002.1 AAGCCCGAGCAGCGATGGGCGGACAGTTATTCCCAAAACAGGGCTCGGATGCGTCGTCTGTCGTCCATGCGCAGTCGCCTCGGAAAATAAGAAATGCAAAGGGTTTAGGATCAGAAGCAGAAACTGGCGCTGAAAGCTGTTGGAACTTCAATTATATTTACAT 30 2231919 0.964289039 12 28 144 0.921052632 1.544068044 0.184210526 0.166666667 0.342105263 30 3 0 35 2L:2231861-2232023 6 Sec24CD FBtr0077810|FBtr0329964 2231776|2231104 2232047|2232047 AGCTGT 6mer3-8 dme-miR-1008-3p 2L - 2231851 2231974 5'utr Sec24CD FlyBase G5490.1 TGCGTCGTCTGTCGTCCATGCGCAGTCGCCTCGGAAAATAAGAAATGCAAAGGGTTTAGGATCAGAAGCAGAAACTGGCGCTGAAAGCTGTTGGAACTTCAATTATATTTACATCAAAATACAT 21 2231919 0.965847527 12 20 109 0.961538462 1.397940009 0.153846154 0.238095238 0.384615385 21 1 0 25 2L:2231851-2231974 6 10 605 FBgn0262126 1107.336667 30.21333333 46.15333333 0.009030677 0.3309797 0.216669074 30 30 30 0.01 dme-miR-263a-5p 6mer3-8 GTGCCA 2L 22368702 22368707 + 2L_22368702_22368707_+ 1 1 1 0 CG17018 FBtr0085956|FBtr0306235|FBtr0306236|FBtr0085957|FBtr0085958 22368442|22368442|22368442|22368442|22368442 22368776|22368796|22368776|22368776|22368776 2L + 22368628 22368757 3'utr CG17018 FlyBase G6130.1 ATATAAATGTTTTATAATGTCGAAGTATTGATTGTAAAGAAAATCAGGGATAGCAACTGGATCGGCCGTACTCAGTGCCAAAAGTTCTTACAAATCCACAAAATGTGTCGAATATATCTCTTTAAGGTCC 47 22368703 0.998130145 12 44 241 0.962962963 1.716003344 0.166666667 0.14893617 0.259259259 47 2 0 52 2L:22368628-22368757 6 CG17018 FBtr0085956|FBtr0085958|FBtr0085957|FBtr0306236|FBtr0306235 22368442|22368442|22368442|22368442|22368442 22368776|22368776|22368776|22368776|22368796 GTGCCA 6mer3-8 dme-miR-263a-5p 2L + 22368639 22368716 3'utr CG17018 FlyBase G4776.1 TTATAATGTCGAAGTATTGATTGTAAAGAAAATCAGGGATAGCAACTGGATCGGCCGTACTCAGTGCCAAAAGTTCTT 31 22368703 0.938385762 5 30 132 1 1.643452676 0.159090909 0.35483871 0.545454545 31 0 0 44 2L:22368639-22368716 6 26.5 606 FBgn0039972 1088.566667 27.93333333 43.30333333 0.024343939 0.948687351 0.611962128 -1 -1 -1 0.01 dme-bantam-3p 7mer-m8 TGATCTC 2L 22533675 22533681 - 2L_22533675_22533681_- 0.661615243 0.661615243 0.661615243 0 RpL5 FBtr0344793 22532277 22534868 2L - 22533592 22533705 3'utr RpL5 FlyBase G12384.1 ATCTAAACCTCTAATCGTGCAAACTGATCTCTTTCTGTACTATAAAGTTTAATTTTAATTTTGCGTAGCTAGAGATAGTTTTCGTTGAGCTGATGATCTCCTTTCTGTGCTAGA 43 22533673 0.817529416 13 41 376 0.958333333 1.662757832 0.375 0.11627907 0.208333333 43 2 0 46 2L:22533592-22533705 7 RpL5 FBtr0344793 22532277 22534868 TGATCTC 7mer-m8 dme-bantam-3p 2L - 22533591 22533693 3'utr RpL5 FlyBase G9489.1 AATCGTGCAAACTGATCTCTTTCTGTACTATAAAGTTTAATTTTAATTTTGCGTAGCTAGAGATAGTTTTCGTTGAGCTGATGATCTCCTTTCTGTGCTAGAT 34 22533674 0.988880417 14 32 301 0.941176471 1.681241237 0.352941176 0.294117647 0.529411765 34 3 0 48 2L:22533591-22533693 7 23 607 FBgn0064225 23918.45333 2812.8 4275.716667 0.000961601 0.008176906 0.005379215 -8 -7 -7.5 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 22534570 22534577 - 2L_22534570_22534577_- 0.500120318 0.500120318 0.500120318 0 RpL5 FBtr0344793|FBtr0332633 22532277|22533915 22534868|22534868 2L - 22534553 22534596 3'utr RpL5 FlyBase G12386.1 TGGTAAGATGGGAACTTGTGTACTTAATTCGGTTTCGGCCGCAG 33 22534578 0.740691695 6 31 310 0.972972973 1.556302501 0.432432432 0.121212121 0.216216216 33 1 0 36 2L:22534553-22534596 8 RpL5 FBtr0344793|FBtr0332633 22532277|22533915 22534868|22534868 GTACTTAA 8mer-A1 dme-miR-252-5p 2L - 22534525 22534596 3'utr RpL5 FlyBase G9490.1 TGGTAAGATGGGAACTTGTGTACTTAATTCGGTTTCGGCCGCAGTGGAACACTATTTCATCAATTCACTGCT 22 22534578 0.988479049 5 22 205 1 1.544068044 0.285714286 0.318181818 0.571428571 22 0 0 35 2L:22534525-22534596 8 26 608 FBgn0064225 23918.45333 2812.8 4275.716667 0.001087027 0.009243458 0.006080852 1 1 1 0.01 dme-miR-1002-5p 6mer3-8 CTACTT 2L 22551445 22551450 + 2L_22551445_22551450_+ 0.999993908 0.999993193 0.99999355 4.95E-07 CG17493 FBtr0332631|FBtr0332632|FBtr0332630 22551106|22551106|22551106 22551662|22556295|22551785 2L + 22551401 22551473 3'utr CG17493 FlyBase G6151.1 GGGAACTAATTATTGGTATATGTTACTTGAATTAGGTCACAACGCTACTTTTTACAGCTTATTGTCTAAATCT 22 22551452 0.953891445 7 21 194 0.892857143 0.795880017 0.142857143 0.181818182 0.357142857 22 0 3 25 2L:22551401-22551473 6 CG17493 FBtr0332630|FBtr0332632|FBtr0332631 22551106|22551106|22551106 22551785|22556295|22551662 CTACTT 6mer3-8 dme-miR-1002-5p 2L + 22551433 22551465 3'utr CG17493 FlyBase G4797.1 TAGGTCACAACGCTACTTTTTACAGCTTATTGT 7 22551452 0.956821511 2 7 43 1 1 0.3 0.428571429 0.6 7 0 0 10 2L:22551433-22551465 6 11 609 FBgn0040010 2105.436667 147.0866667 226.3066667 0.005224569 0.074785841 0.04860661 -7 -7 -7 0.01 dme-bantam-3p 6mer2-7 GATCTC 2L 22849162 22849167 + 2L_22849162_22849167_+ 1 1 1 0 CG17715 FBtr0111244|FBtr0111248 22849099|22849099 22850310|22850310 2L + 22849138 22849185 3'utr CG17715 FlyBase G6179.1 TATTACAGCAGCCGGACCATCATCGATCTCTTGTCGCAATGAAGGTAT 36 22849168 0.649552912 4 36 222 1 1.633468456 0.186046512 0.166666667 0.302325581 36 0 0 43 2L:22849138-22849185 6 CG17715 FBtr0111248|FBtr0111244 22849099|22849099 22850310|22850310 GATCTC 6mer2-7 dme-bantam-3p 2L + 22849141 22849187 3'utr CG17715 FlyBase G4821.1 TACAGCAGCCGGACCATCATCGATCTCTTGTCGCAATGAAGGTATCA 27 22849168 0.974960663 4 27 172 1 1.602059991 0.1 0.333333333 0.55 27 0 0 40 2L:22849141-22849187 6 31 610 FBgn0041004 1535.806667 93.98666667 143.51 0.020184832 0.329834019 0.216012821 -6 -6 -6 0.01 dme-miR-999-3p 7mer-A1 GTTAACA 2L 22849976 22849982 + 2L_22849976_22849982_+ 0.823349562 0.823349562 0.823349562 0 CG17715 FBtr0306550|FBtr0111245|FBtr0111246|FBtr0111244|FBtr0111248|FBtr0111247|FBtr0111249 22849802|22849802|22849802|22849099|22849099|22849802|22849802 22850310|22850310|22850310|22850310|22850310|22854208|22853034 2L + 22849915 22850003 3'utr CG17715 FlyBase G6181.1 AATTTGAATATGTATCAAATGTTTGTTAGGCAACTTAAAAAACGTACCAAAAGTATCTGAGGTTAACATATGCTCATCGGCGGTAATTT 17 22849972 0.957168219 8 17 109 1 1.342422681 0.136363636 0.294117647 0.454545455 17 0 0 22 2L:22849915-22850003 7 CG17715 FBtr0111246|FBtr0111245|FBtr0306550|FBtr0111249|FBtr0111247|FBtr0111248|FBtr0111244 22849802|22849802|22849802|22849802|22849802|22849099|22849099 22850310|22850310|22850310|22853034|22854208|22850310|22850310 GTTAACA 7mer-A1 dme-miR-999-3p 2L + 22849948 22849998 3'utr CG17715 FlyBase G4822.1 CTTAAAAAACGTACCAAAAGTATCTGAGGTTAACATATGCTCATCGGCGGT 18 22849972 0.963339674 3 17 92 1 1.397940009 0.2 0.333333333 0.52 18 0 0 25 2L:22849948-22849998 7 15 611 FBgn0041004 1535.806667 93.98666667 143.51 0.009766854 0.159597106 0.104522333 4 4 4 0.01 dme-miR-2535b-3p 7mer-A1 CGTGAGA 2L 22992024 22992030 + 2L_22992024_22992030_+ 0.770553199 0.528266616 0.649409908 0.171322498 cta FBtr0111126|FBtr0334157 22991942|22991942 22992343|22992951 2L + 22991932 22992138 stop_codon cta FlyBase G6221.1 ATGCTTCAGTAGTAACCACCATTCTTATAAACAAAAATGAAGAGTAAGAACTTGCAGTTATTTTAAACGACCCATGAACAGAATTTTACAATCGTGAGACTGACCCTTGCTGAAGCTATTTGCAATTCAAAGGGAAATGCACATGGTTTTCAATGCCTTAGACACGTGAAGTTAAGCTACAGTGAAATCCTTCGGTAACTATGATAA 279 22992026 0.860956752 29 262 1598 0.946107784 2.022565828 0.371257485 0.17562724 0.311377246 279 16 2 316 2L:22991932-22992138 7 cta FBtr0111126|FBtr0334157 22991942|22991942 22992343|22992951 CGTGAGA 7mer-A1 dme-miR-2535b-3p 2L + 22991967 22992141 3'utr cta FlyBase G4850.1 AATGAAGAGTAAGAACTTGCAGTTATTTTAAACGACCCATGAACAGAATTTTACAATCGTGAGACTGACCCTTGCTGAAGCTATTTGCAATTCAAAGGGAAATGCACATGGTTTTCAATGCCTTAGACACGTGAAGTTAAGCTACAGTGAAATCCTTCGGTAACTATGATAAATA 207 22992026 0.901181686 25 190 1130 0.926666667 1.745074792 0.326666667 0.342995169 0.546666667 207 18 4 278 2L:22991967-22992141 7 193.5 612 FBgn0000384 1592.86 81.62333333 124.9 0.121479603 2.370645649 1.549239392 -2 -2 -2 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 22992234 22992240 + 2L_22992234_22992240_+ 0.801970431 0.801969948 0.80197019 3.54E-07 cta FBtr0111126|FBtr0111126|FBtr0111126|FBtr0334157|FBtr0334157|FBtr0334157 22991942|22991942|22991942|22991942|22991942|22991942 22992343|22992343|22992343|22992951|22992951|22992951 2L + 22992147 22992259 3'utr cta FlyBase G6222.1 ATATAATGATAAAAACCGAGACTACAGCATTTTAATATGCATATAGACTTATTTAAACCCATCGGCAAACTTAGTTATCGTGGTATTTGTGATATAATAATATTAATAACAAC 289 22992232 0.906334045 23 265 3111 0.928774929 1.399274248 0.017094017 0.173010381 0.319088319 289 13 12 326 2L:22992147-22992259 7 cta FBtr0111126|FBtr0111126|FBtr0111126|FBtr0334157|FBtr0334157|FBtr0334157 22991942|22991942|22991942|22991942|22991942|22991942 22992343|22992343|22992343|22992951|22992951|22992951 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 22992146 22992260 3'utr cta FlyBase G4850.2 TATATAATGATAAAAACCGAGACTACAGCATTTTAATATGCATATAGACTTATTTAAACCCATCGGCAAACTTAGTTATCGTGGTATTTGTGATATAATAATATTAATAACAACT 203 22992232 0.770985657 24 187 2111 0.93015873 1.352924268 0.015873016 0.403940887 0.615873016 203 10 12 293 2L:22992146-22992260 7 196.5 613 FBgn0000384 1592.86 81.62333333 124.9 0.123363007 2.407399845 1.573258607 2 2 2 0.01 dme-miR-1003-3p 8mer-A1 ATGTGAGA 2L 22992406 22992413 + 2L_22992406_22992413_+ 0.643565034 0.643563417 0.643564226 1.13E-06 cta FBtr0334157 22991942 22992951 2L + 22992380 22992456 3'utr cta FlyBase G6224.1 CGTTTTGAAAAGCCATTAACCAATTTATGTGAGATTTTAAAAGCAGCTGAAATATTTTTAAATGGTCGTTAAAAGTA 48 22992404 0.827311584 10 43 400 0.870967742 1.73239376 0.064516129 0.229166667 0.403225806 48 8 0 54 2L:22992380-22992456 8 cta FBtr0334157 22991942 22992951 ATGTGAGA 8mer-A1 dme-miR-1003-3p 2L + 22992365 22992456 3'utr cta FlyBase G4851.1 TTTTGCGTGCATCTTCGTTTTGAAAAGCCATTAACCAATTTATGTGAGATTTTAAAAGCAGCTGAAATATTTTTAAATGGTCGTTAAAAGTA 41 22992404 0.988034305 15 38 348 0.901639344 1.740362689 0.098360656 0.390243902 0.590163934 41 6 0 55 2L:22992365-22992456 8 37 614 FBgn0000384 1592.86 81.62333333 124.9 0.023228658 0.453301752 0.29623699 2 2 2 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG 2L 22992592 22992597 + 2L_22992592_22992597_+ 1 1 1 0 cta FBtr0334157 22991942 22992951 2L + 22992559 22992629 3'utr cta FlyBase G6226.1 CGTAGGCGTTTTCGTTTTAAGAAGCTAATCACCGCTGTGCGTCAAATTTAAAAAGCAGCAGACACTTTTTT 46 22992594 0.972239392 3 46 275 1 1.707570176 0.058823529 0.108695652 0.196078431 46 0 0 51 2L:22992559-22992629 6 cta FBtr0334157 22991942 22992951 GCTGTG 6mer2-7 dme-miR-1008-3p 2L + 22992561 22992613 3'utr cta FlyBase G4852.1 TAGGCGTTTTCGTTTTAAGAAGCTAATCACCGCTGTGCGTCAAATTTAAAAAG 35 22992594 0.972851584 3 34 208 1 1.643452676 0.022727273 0.228571429 0.386363636 35 0 0 44 2L:22992561-22992613 6 38.5 615 FBgn0000384 1592.86 81.62333333 124.9 0.02417036 0.47167885 0.308246597 -2 -2 -2 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 22992669 22992674 + 2L_22992669_22992674_+ 1 1 1 0 cta FBtr0334157 22991942 22992951 2L + 22992652 22992719 3'utr cta FlyBase G6227.1 CGACTTCTAATGGAATGATGTGACTGTATACCACACTTTAAAACGGATTTAAAATAAATTAAAAAATT 18 22992670 0.970685795 8 18 116 1 1.342422681 0.045454545 0.222222222 0.363636364 18 0 0 22 2L:22992652-22992719 6 cta FBtr0334157 22991942 22992951 ATGTGA 6mer3-8 dme-miR-1003-3p 2L + 22992649 22992684 3'utr cta FlyBase G4853.1 TATCGACTTCTAATGGAATGATGTGACTGTATACCA 7 22992670 0.967233462 3 7 43 1 1.176091259 0 0.428571429 0.733333333 7 0 0 15 2L:22992649-22992684 6 11 616 FBgn0000384 1592.86 81.62333333 124.9 0.006905817 0.134765386 0.088070456 -1 -1 -1 0.01 dme-miR-1006-3p 7mer-A1 GAATTTA 2L 22992850 22992856 + 2L_22992850_22992856_+ 0.69984865 0.69984865 0.69984865 0 cta FBtr0334157 22991942 22992951 2L + 22992822 22992862 3'utr cta FlyBase G6228.1 ATATCATGTGCAACACAGAAAATACACGGAATTTATACCTA 12 22992844 0.947224235 3 11 52 0.923076923 1.079181246 0.076923077 0.083333333 0.153846154 12 1 0 12 2L:22992822-22992862 7 cta FBtr0334157 22991942 22992951 GAATTTA 7mer-A1 dme-miR-1006-3p 2L + 22992828 22992871 3'utr cta FlyBase G4854.1 TGTGCAACACAGAAAATACACGGAATTTATACCTACTAAGAATG 11 22992844 0.978373613 3 10 51 1 1.176091259 0.2 0.272727273 0.466666667 11 0 0 15 2L:22992828-22992871 7 11 617 FBgn0000384 1592.86 81.62333333 124.9 0.006905817 0.134765386 0.088070456 6 6 6 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2L 23161222 23161228 - 2L_23161222_23161228_- 0.671796082 0.671796082 0.671796082 0 CG12567 FBtr0300704|FBtr0113705|FBtr0300703|FBtr0300702|FBtr0344847|FBtr0113704 23161120|23161120|23161120|23161120|23161120|23161120 23161957|23162856|23162903|23161957|23161957|23161957 2L - 23161167 23161246 3'utr CG12567 FlyBase G12434.1 CTTTTAATATATGTAGTAACCAAAGTGCTCAAAATTAAGAGATACATTATAGGTAGGATAATGTTACTTATGTACATTTT 14 23161221 0.985153247 7 14 110 1 1.176091259 0 0.071428571 0.133333333 14 0 0 15 2L:23161167-23161246 7 CG12567 FBtr0300702|FBtr0300703|FBtr0113705|FBtr0300704|FBtr0113704|FBtr0344847 23161120|23161120|23161120|23161120|23161120|23161120 23161957|23162903|23162856|23161957|23161957|23161957 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 23161206 23161238 3'utr CG12567 FlyBase G9526.1 ATATGTAGTAACCAAAGTGCTCAAAATTAAGAG 5 23161220 0.744184911 4 5 19 1 0.698970004 0 0 0 5 0 0 5 2L:23161206-23161238 7 7 618 FBgn0039958 1066.65 65.05666667 99.82333333 0.006562603 0.107598504 0.070123886 -7 -8 -7.5 0.01 dme-miR-1008-3p 8mer-A1 AGCTGTGA 2L 23161633 23161640 - 2L_23161633_23161640_- 0.643559238 0.643565469 0.643562353 4.45E-06 CG12567 FBtr0300704|FBtr0113705|FBtr0300703|FBtr0300702|FBtr0344847|FBtr0113704 23161120|23161120|23161120|23161120|23161120|23161120 23161957|23162856|23162903|23161957|23161957|23161957 2L - 23161532 23161677 3'utr CG12567 FlyBase G12436.2 AATTATCAAATATCACTTCATTGTGTAGTCTACTAACAGCTGTGAAGAGTTTGTAATGCACTTAGAATTTTAAAAGTAGTGTTGAGCTGGTTTGTATTTGAATAATGAACAAAATAATGACAAATTCTAAAATTCTGCTAAAAAAT 70 23161646 0.92462623 24 63 495 0.905882353 1.284430734 0.294117647 0.185714286 0.329411765 70 5 3 77 2L:23161532-23161677 8 CG12567 FBtr0300702|FBtr0300703|FBtr0113705|FBtr0300704|FBtr0113704|FBtr0344847 23161120|23161120|23161120|23161120|23161120|23161120 23161957|23162903|23162856|23161957|23161957|23161957 AGCTGTGA 8mer-A1 dme-miR-1008-3p 2L - 23161619 23161723 3'utr CG12567 FlyBase G9529.3 TTTTATTTCACAATATCGGTCAGCATTAAGAAGTAAAATTATTACAAATTATCAAATATCACTTCATTGTGTAGTCTACTAACAGCTGTGAAGAGTTTGTAATGC 70 23161646 0.865760245 14 65 399 0.948717949 1.568201724 0.162393162 0.471428571 0.683760684 70 4 2 111 2L:23161619-23161723 8 41.5 619 FBgn0039958 1066.65 65.05666667 99.82333333 0.038906858 0.637905416 0.415734464 6 6 6 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 2L 23161834 23161839 - 2L_23161834_23161839_- 1 1 1 0 CG12567 FBtr0300704|FBtr0113705|FBtr0300703|FBtr0300702|FBtr0344847|FBtr0113704 23161120|23161120|23161120|23161120|23161120|23161120 23161957|23162856|23162903|23161957|23161957|23161957 2L - 23161771 23161915 3'utr CG12567 FlyBase G12438.1 CTACAAAGAAATATTAATGCAAGCTCAAAACAAAATAAAAGTGATTGTAATTGAAGTGAACTTTCTGAAGCCCAGGCTAGTCTCCAAGAGGTAAACATTAATGGACGTATTGCCCTTCCCTAGAAGTCTGATTATAAAATGAAGT 167 23161869 0.799807763 28 153 1214 0.917525773 1.551449998 0.067010309 0.131736527 0.25257732 167 12 4 178 2L:23161771-23161915 6 CG12567 FBtr0300702|FBtr0300703|FBtr0113705|FBtr0300704|FBtr0113704|FBtr0344847 23161120|23161120|23161120|23161120|23161120|23161120 23161957|23162903|23162856|23161957|23161957|23161957 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 2L - 23161775 23161910 3'utr CG12567 FlyBase G9530.1 AAGAAATATTAATGCAAGCTCAAAACAAAATAAAAGTGATTGTAATTGAAGTGAACTTTCTGAAGCCCAGGCTAGTCTCCAAGAGGTAAACATTAATGGACGTATTGCCCTTCCCTAGAAGTCTGATTATAAAATG 118 23161869 0.80589514 20 114 853 0.960893855 2.235528447 0.150837989 0.393162393 0.603351955 117 7 0 172 2L:23161775-23161910 6 8.5 620 FBgn0039958 1066.65 65.05666667 99.82333333 0.007968875 0.130655326 0.085150432 30 30 30 0.01 dme-miR-31a-5p 8mer-A1 TCTTGCCA 2L 23162033 23162040 - 2L_23162033_23162040_- 0.631136385 0.631136385 0.631136385 0 CG12567 FBtr0113705|FBtr0300703 23161120|23161120 23162856|23162903 2L - 23161998 23162083 3'utr CG12567 FlyBase G12439.1 ACGTACAAGACACGCTTTGAGCAATCCATAAAACAACCTCAATTCTTGCCAGGTGATTCCAAAAACTGTAACTGTGCAATATTTCA 48 23162041 0.79079679 7 46 260 0.981481481 1.423245874 0.018518519 0.083333333 0.185185185 48 0 1 53 2L:23161998-23162083 8 CG12567 FBtr0300703|FBtr0113705 23161120|23161120 23162903|23162856 TCTTGCCA 8mer-A1 dme-miR-31a-5p 2L - 23162000 23162082 3'utr CG12567 FlyBase G9531.1 CGTACAAGACACGCTTTGAGCAATCCATAAAACAACCTCAATTCTTGCCAGGTGATTCCAAAAACTGTAACTGTGCAATATTT 40 23162041 0.968761512 5 39 216 1 1.799340549 0.031746032 0.375 0.603174603 40 0 0 63 2L:23162000-23162082 8 38 621 FBgn0039958 1066.65 65.05666667 99.82333333 0.035625557 0.584106164 0.380672521 1 1 1 0.01 dme-miR-305-3p 6mer2-7 TGTGCC 2L 23162361 23162366 - 2L_23162361_23162366_- 0.999998715 1 0.999999357 9.19E-07 CG12567 FBtr0113705|FBtr0300703 23161120|23161120 23162856|23162903 2L - 23162315 23162434 5'utr CG12567 FlyBase G12442.1 TTTGAAAGCCGACAAGGACTTTTTCCCAATACCGAATATGTTTTCGACTTAGAGCTACCACTTGACTTTGTGCCTCAAAACGCTGACGGGGAGGTCCAGGCCTTTGAGCTGCTAACAGCC 60 23162366 0.840406626 14 59 416 0.987012987 1.880813592 0.116883117 0.233333333 0.402597403 60 1 0 76 2L:23162315-23162434 6 CG12567 FBtr0300703|FBtr0113705 23161120|23161120 23162903|23162856 TGTGCC 6mer2-7 dme-miR-305-3p 2L - 23162323 23162393 5'utr CG12567 FlyBase G9532.1 TTTCGACTTAGAGCTACCACTTGACTTTGTGCCTCAAAACGCTGACGGGGAGGTCCAGGCCTTTGAGCTGC 27 23162366 0.980996732 6 27 193 1 1.653212514 0.155555556 0.333333333 0.6 27 0 0 45 2L:23162323-23162393 6 34.5 622 FBgn0039958 1066.65 65.05666667 99.82333333 0.032344255 0.530306912 0.345610579 0 0 0 0.01 dme-miR-184-5p 6mer3-8 TGATAA 2L 2360349 2360354 - 2L_2360349_2360354_- 1 1 1 0 Rab5 FBtr0330670|FBtr0077797|FBtr0077793|FBtr0077796|FBtr0330668|FBtr0077794|FBtr0077798|FBtr0077795|FBtr0330669 2359564|2359140|2359564|2359140|2359564|2359564|2359564|2359564|2359564 2360468|2360468|2360468|2360468|2360468|2360468|2360468|2360468|2360468 2L - 2360332 2360395 intron-3'utr Rab5 FlyBase G7031.1 AGAAAATGAAATTTCCAACGAGAGATTTGAAAAGTTTATGCTGATAATTATAAATAAAAAAATT 69 2360358 0.705093441 9 67 590 0.974683544 1.886490725 0.17721519 0.101449275 0.215189873 69 2 0 77 2L:2360332-2360395 6 Rab5 FBtr0330668|FBtr0077794|FBtr0077795|FBtr0077798|FBtr0330669|FBtr0330670|FBtr0077797|FBtr0077793|FBtr0077796 2359564|2359564|2359564|2359564|2359564|2359564|2359140|2359564|2359140 2360468|2360468|2360468|2360468|2360468|2360468|2360468|2360468|2360468 TGATAA 6mer3-8 dme-miR-184-5p 2L - 2360335 2360389 3'utr Rab5 FlyBase G5515.1 TGAAATTTCCAACGAGAGATTTGAAAAGTTTATGCTGATAATTATAAATAAAAAA 49 2360358 0.702205175 9 43 416 0.894736842 1.531478917 0.223684211 0.408163265 0.618421053 49 7 1 68 2L:2360335-2360389 6 53 623 FBgn0014010 2481.693333 154.6633333 236.7366667 0.021356386 0.342679799 0.223877445 4 4 4 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2L 2369389 2369394 + 2L_2369389_2369394_+ 1 1 1 0 Axud1 FBtr0077762|FBtr0330666|FBtr0330665|FBtr0077763 2368980|2368980|2368980|2368980 2370137|2370137|2370137|2370137 2L + 2369332 2369422 3'utr Axud1 FlyBase G1227.1 CCGAGGAGGAGGCAGCTGAGAGCTGAGAATAGTTTTTATAGCAATTTTACACAGCAAAAGACTTCATTACGTTTAAGGCGGCGGCGGGCTT 48 2369398 0.97705049 12 44 282 0.924528302 1.69019608 0.377358491 0.0625 0.150943396 48 4 0 49 2L:2369332-2369422 6 Axud1 FBtr0077763|FBtr0330665|FBtr0330666|FBtr0077762 2368980|2368980|2368980|2368980 2370137|2370137|2370137|2370137 AAGACT 6mer3-8 dme-miR-14-3p 2L + 2369376 2369431 3'utr Axud1 FlyBase G960.1 TTTTACACAGCAAAAGACTTCATTACGTTTAAGGCGGCGGCGGGCTTGGCTGGAAA 19 2369398 0.970466168 5 18 102 0.967741935 1.477121255 0.483870968 0.368421053 0.612903226 19 1 0 30 2L:2369376-2369431 6 24.5 624 FBgn0261647 491.4533333 14.28 22 0.049852139 1.715686275 1.113636364 -9 -9 -9 0.01 dme-miR-276a-3p 6mer3-8 AGTTCC 2L 2369659 2369664 + 2L_2369659_2369664_+ 1 1 1 0 Axud1 FBtr0077762|FBtr0330666|FBtr0330665|FBtr0077763 2368980|2368980|2368980|2368980 2370137|2370137|2370137|2370137 2L + 2369542 2369682 3'utr Axud1 FlyBase G1229.1 AATCGGACTCAAGTCGCCTTGTATAAATCATTTTATTGTTAAATTCGAGTTAGTCTCTAAGTACATACTGTAGTTTAGTTACTTTGTTGCTTAAGTTAAGTTCACTTCGCAAAATCAAGTTCCCTTCCTACTCAACTTTAA 20 2369661 0.990769375 10 16 170 0.833333333 1 0.041666667 0.15 0.291666667 20 3 1 20 2L:2369542-2369682 6 Axud1 FBtr0077763|FBtr0330665|FBtr0330666|FBtr0077762 2368980|2368980|2368980|2368980 2370137|2370137|2370137|2370137 AGTTCC 6mer3-8 dme-miR-276a-3p 2L + 2369630 2369676 3'utr Axud1 FlyBase G962.1 GCTTAAGTTAAGTTCACTTCGCAAAATCAAGTTCCCTTCCTACTCAA 6 2369661 0.969950406 3 6 36 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 2L:2369630-2369676 6 8 625 FBgn0261647 491.4533333 14.28 22 0.01627825 0.56022409 0.363636364 -2 -2 -2 0.01 dme-miR-79-3p 7mer-m8 TAGCTTT 2L 2422688 2422694 + 2L_2422688_2422694_+ 0.620204031 0.620204031 0.620204031 0 CG9886 FBtr0077770|FBtr0335462 2422414|2422414 2422910|2424647 2L + 2422668 2422706 3'utr CG9886 FlyBase G1242.1 TGACAGCATAAAACGGCAATTAGCTTTCGTCTCCGGTTA 6 2422687 0.980892215 2 6 46 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 2L:2422668-2422706 7 CG9886 FBtr0077770|FBtr0335462 2422414|2422414 2422910|2424647 TAGCTTT 7mer-m8 dme-miR-79-3p 2L + 2422677 2422702 3'utr CG9886 FlyBase G972.1 AAAACGGCAATTAGCTTTCGTCTCCG 5 2422687 0.943960656 2 5 30 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 2L:2422677-2422702 7 5.5 626 FBgn0031428 49.66666667 2.643333333 4.073333333 0.110738255 2.080706179 1.350245499 1 1 1 0.01 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 2497415 2497422 + 2L_2497415_2497422_+ 0.625329815 0.623263726 0.62429677 0.001460953 oaf FBtr0077777|FBtr0077780|FBtr0077778 2496696|2497161|2496696 2498846|2498846|2498454 2L + 2497304 2497462 3'utr oaf FlyBase G1249.1 TATACTACAGCAAAAAAGGAGTAAAACGAAATAAATGTAAAAAAGTGCTTCTGTATACTATGTATATATATGTATATTTAACGATGATTAGCTTTTAGCCAGCTTACGTTTTACGCTTATGCCGGATTTAAGTTTAGACCTAGATTAGGTGTCCTTATT 46 2497391 0.989282309 15 44 412 0.962962963 1.716003344 0.240740741 0.152173913 0.277777778 46 2 0 52 2L:2497304-2497462 8 oaf FBtr0077780|FBtr0077778|FBtr0077777 2497161|2496696|2496696 2498846|2498454|2498846 TACGCTTA 8mer-A1 dme-miR-965-3p 2L + 2497373 2497467 3'utr oaf FlyBase G976.1 ATGTATATTTAACGATGATTAGCTTTTAGCCAGCTTACGTTTTACGCTTATGCCGGATTTAAGTTTAGACCTAGATTAGGTGTCCTTATTTAATT 21 2497414 0.988198333 6 20 189 0.970588235 1.217483944 0.411764706 0.428571429 0.647058824 21 0 1 33 2L:2497373-2497467 8 17 627 FBgn0011818 255.6 10.51666667 16.17333333 0.066510172 1.616481775 1.051112943 24 1 12.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2L 2497550 2497555 + 2L_2497550_2497555_+ 0.999999869 0.99999727 0.999998569 1.84E-06 oaf FBtr0077777|FBtr0077777|FBtr0077777|FBtr0077780|FBtr0077780|FBtr0077780|FBtr0077778|FBtr0077778|FBtr0077778 2496696|2496696|2496696|2497161|2497161|2497161|2496696|2496696|2496696 2498846|2498846|2498846|2498846|2498846|2498846|2498454|2498454|2498454 2L + 2497534 2497563 3'utr oaf FlyBase G1250.1 TCCTTTCCTACTACAGTGTGATCTTTTATC 10 2497545 0.769796121 5 10 88 1 1.176091259 0 0.3 0.533333333 10 0 0 15 2L:2497534-2497563 6 oaf FBtr0077780|FBtr0077780|FBtr0077780|FBtr0077778|FBtr0077778|FBtr0077778|FBtr0077777|FBtr0077777|FBtr0077777 2497161|2497161|2497161|2496696|2496696|2496696|2496696|2496696|2496696 2498846|2498846|2498846|2498454|2498454|2498454|2498846|2498846|2498846 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 2497531 2497563 3'utr oaf FlyBase G977.1 TAATCCTTTCCTACTACAGTGTGATCTTTTATC 9 2497546 0.782081952 4 9 97 1 1.113943352 0 0.444444444 0.615384615 9 0 0 13 2L:2497531-2497563 6 9.5 628 FBgn0011818 255.6 10.51666667 16.17333333 0.037167449 0.903328051 0.587386645 5 4 4.5 0.01 dme-miR-932-5p 6mer3-8 GGAATT 2L 2498090 2498095 + 2L_2498090_2498095_+ 1 1 1 0 oaf FBtr0077777|FBtr0077780|FBtr0077778 2496696|2497161|2496696 2498846|2498846|2498454 2L + 2498041 2498111 3'utr oaf FlyBase G1253.1 ATTCATTGAACTAAGGAATATGTATGTATGTCAGGCGTTGGCAAAACTCGGAATTAATTGTGCTCATAATA 6 2498098 0.973158993 5 6 40 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 2L:2498041-2498111 6 oaf FBtr0077780|FBtr0077778|FBtr0077777 2497161|2496696|2496696 2498846|2498454|2498846 GGAATT 6mer3-8 dme-miR-932-5p 2L + 2498047 2498111 3'utr oaf FlyBase G980.1 TGAACTAAGGAATATGTATGTATGTCAGGCGTTGGCAAAACTCGGAATTAATTGTGCTCATAATA 10 2498098 0.984050599 4 9 69 0.923076923 0.77815125 0 0.3 0.461538462 10 0 1 12 2L:2498047-2498111 6 6 629 FBgn0011818 255.6 10.51666667 16.17333333 0.023474178 0.570522979 0.370981039 -8 -8 -8 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 2498712 2498717 + 2L_2498712_2498717_+ 1 1 1 0 oaf FBtr0077777|FBtr0077780 2496696|2497161 2498846|2498846 2L + 2498692 2498754 3'utr oaf FlyBase G1256.1 TTAAAACTGGTAAGACTCGATGATCTGAATTGTGTGAATAGCATTTGCCAATATTAACGATTA 104 2498712 0.812186062 7 102 642 0.991935484 2.089905111 0.290322581 0.163461538 0.298387097 104 1 0 123 2L:2498692-2498754 6 oaf FBtr0077780|FBtr0077777 2497161|2496696 2498846|2498846 TGATCT 6mer3-8 dme-bantam-3p 2L + 2498689 2498737 3'utr oaf FlyBase G981.1 CATTTAAAACTGGTAAGACTCGATGATCTGAATTGTGTGAATAGCATTT 74 2498712 0.823319657 5 73 463 0.98245614 1.572096768 0.289473684 0.337837838 0.570175439 74 0 2 112 2L:2498689-2498737 6 88 630 FBgn0011818 255.6 10.51666667 16.17333333 0.34428795 8.367670365 5.441055235 0 0 0 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 2739622 2739628 + 2L_2739622_2739628_+ 0.801970437 0.801970437 0.801970437 0 CG31689 FBtr0077707|FBtr0077707|FBtr0077707|FBtr0334158|FBtr0334158|FBtr0334158|FBtr0077708|FBtr0077708|FBtr0077708|FBtr0077705|FBtr0077705|FBtr0077705|FBtr0077706|FBtr0077706|FBtr0077706|FBtr0334160|FBtr0334160|FBtr0334160|FBtr0334159|FBtr0334159|FBtr0334159|FBtr0334161|FBtr0334161|FBtr0334161 2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499 2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830 2L + 2739581 2739647 3'utr CG31689 FlyBase G1277.1 TCGCTTAGTTGCAAGTAAACCCAATCTTTTATATACCGGCGTGTGATACTTTAACAAATGCAACGGA 44 2739624 0.985105863 10 41 334 0.905660377 1.681241237 0 0.204545455 0.339622642 44 5 0 48 2L:2739581-2739647 7 CG31689 FBtr0077705|FBtr0077705|FBtr0077705|FBtr0077708|FBtr0077708|FBtr0077708|FBtr0334158|FBtr0334158|FBtr0334158|FBtr0077707|FBtr0077707|FBtr0077707|FBtr0334161|FBtr0334161|FBtr0334161|FBtr0334159|FBtr0334159|FBtr0334159|FBtr0334160|FBtr0334160|FBtr0334160|FBtr0077706|FBtr0077706|FBtr0077706 2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499 2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 2739603 2739651 3'utr CG31689 FlyBase G996.2 AATCTTTTATATACCGGCGTGTGATACTTTAACAAATGCAACGGACCAT 38 2739624 0.886701381 8 34 293 0.95 1.755874856 0.083333333 0.421052632 0.633333333 38 3 0 57 2L:2739603-2739651 7 38.5 631 FBgn0031449 1015.49 47.98666667 73.49333333 0.037912732 0.802306196 0.523857039 -2 -2 -2 0.01 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2L 2756584 2756589 + 2L_2756584_2756589_+ 1 0.999999986 0.999999993 0 Bacc FBtr0307080|FBtr0335125 2756293|2756293 2757975|2757920 2L + 2756543 2756774 5'utr-coding Bacc FlyBase G1300.2 ACTTTTTTTATAAAAAACTACAAAACAAACAAAAATTGTAATTGAAGGCATTTTCGTATAAACGCAACCTATACGGAATCCAACAAAAAGTAAACATCCCCACTATATACAAGAACAAAACAAAACCAAAATCTTTCTTTCCTTTATCTCATAAGTCCTAATTTAAACGCCCAGTTGATGCGTAAACCAAGATATACAAAGATTTCAAATGTAGCGTAAACGAAGCCCGCGA 111 2756578 0.970383919 30 99 603 0.911764706 1.61630043 0.147058824 0.216216216 0.360294118 111 10 2 124 2L:2756543-2756774 6 Bacc FBtr0307080|FBtr0335125 2756293|2756293 2757975|2757920 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2L + 2756526 2756662 5'utr Bacc FlyBase G1011.1 AATTGTATTTTATGTGTACTTTTTTTATAAAAAACTACAAAACAAACAAAAATTGTAATTGAAGGCATTTTCGTATAAACGCAACCTATACGGAATCCAACAAAAAGTAAACATCCCCACTATATACAAGAACAAAA 53 2756578 0.967969085 18 47 264 0.911392405 1.857332496 0.253164557 0.396226415 0.594936709 53 7 0 72 2L:2756526-2756662 6 34.5 632 FBgn0031453 6284.453333 781.6066667 1192.22 0.005489738 0.044139849 0.028937612 6 6 6 0.01 dme-miR-8-3p 8mer-A1 CAGTATTA 2L 2757260 2757267 + 2L_2757260_2757267_+ 0.671698124 0.671698124 0.671698124 0 Bacc FBtr0307080|FBtr0335125 2756293|2756293 2757975|2757920 2L + 2757236 2757330 5'utr Bacc FlyBase G1304.1 ATGACTAATCTTAAGTACTTATGTCAGTATTAAAGCGAGGGCTTTATTATTCTGTTGATAAGTTGTGCGAGCGAGTCGTTGATAAGCCTAATTCA 217 2757257 0.858738949 9 214 1930 0.987234043 2.365487985 0.370212766 0.069124424 0.140425532 217 3 0 232 2L:2757236-2757330 8 Bacc FBtr0307080|FBtr0335125 2756293|2756293 2757975|2757920 CAGTATTA 8mer-A1 dme-miR-8-3p 2L + 2757236 2757329 5'utr Bacc FlyBase G1014.1 ATGACTAATCTTAAGTACTTATGTCAGTATTAAAGCGAGGGCTTTATTATTCTGTTGATAAGTTGTGCGAGCGAGTCGTTGATAAGCCTAATTC 113 2757257 0.867345377 14 105 951 0.943396226 1.875061263 0.402515723 0.309734513 0.509433962 113 8 1 150 2L:2757236-2757329 8 144.5 633 FBgn0031453 6284.453333 781.6066667 1192.22 0.022993249 0.184875598 0.121202463 3 3 3 0.01 dme-miR-277-3p 6mer2-7 GCATTT 2L 2758590 2758595 - 2L_2758590_2758595_- 1 1 1 0 Snapin FBtr0077737 2758425 2759242 2L - 2758551 2758638 3'utr Snapin FlyBase G7079.1 AGTTCCGGGCTGTTAAGTTCATGGAGCGACGCATTCCTGGCGAGCATTTGTGCATACTGAAGGTCACCAGGTACTTGGCATCATCATG 9 2758591 0.977234402 5 8 59 0.9 0.954242509 0 0.111111111 0.2 9 1 0 9 2L:2758551-2758638 6 Snapin FBtr0077737 2758425 2759242 GCATTT 6mer2-7 dme-miR-277-3p 2L - 2758544 2758614 3'utr Snapin FlyBase G5556.1 AGCGACGCATTCCTGGCGAGCATTTGTGCATACTGAAGGTCACCAGGTACTTGGCATCATCATGACTCGTG 10 2758591 0.970047881 5 10 55 1 1.230448921 0.117647059 0.4 0.647058824 10 0 0 17 2L:2758544-2758614 6 6 634 FBgn0031455 48.16666667 4.743333333 7.233333333 0.124567474 1.26493324 0.829493088 -4 -4 -4 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2L 2763587 2763593 - 2L_2763587_2763593_- 0.521223855 0.521223855 0.521223855 0 CG3077 FBtr0335129 2763414 2764305 2L - 2763565 2763609 3'utr CG3077 FlyBase G7083.1 TTCCAGCCCAATGTCTTGTGATTGCTTTTTCAATAAATAAATATT 58 2763594 0.601201452 6 54 474 0.941176471 1.329058719 0.029411765 0.155172414 0.279411765 58 2 2 64 2L:2763565-2763609 7 CG3077 FBtr0335129 2763414 2764305 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 2763555 2763611 3'utr CG3077 FlyBase G5559.1 TCTTCCAGCCCAATGTCTTGTGATTGCTTTTTCAATAAATAAATATTATACTCAAGT 35 2763594 0.986368474 7 34 284 0.961538462 1.22184875 0.038461538 0.428571429 0.615384615 35 0 2 50 2L:2763555-2763611 7 44.5 635 FBgn0031457 325.67 20.19 30.60333333 0.136641385 2.204061417 1.454089968 1 1 1 0.01 dme-miR-283-5p 6mer3-8 TGATAT 2L 2763811 2763816 - 2L_2763811_2763816_- 1 1 1 0 CG3077 FBtr0335129 2763414 2764305 2L - 2763784 2763838 3'utr CG3077 FlyBase G7084.1 ATGTTTCATGTTACGTATTGTTTGATATCTCTTCAATCGTCTAGTTTGTAGTTTG 11 2763828 0.816704759 5 9 122 0.769230769 1 0.076923077 0.181818182 0.307692308 11 3 0 10 2L:2763784-2763838 6 CG3077 FBtr0335129 2763414 2764305 TGATAT 6mer3-8 dme-miR-283-5p 2L - 2763764 2763884 3'utr CG3077 FlyBase G5560.1 CGTAACGTACTGCTTTGGTAACTTAAAGGTTAGTCTAAGCATATTTATGTTTCATGTTACGTATTGTTTGATATCTCTTCAATCGTCTAGTTTGTAGTTTGTACCCAGTGGGAGTTGTGAT 18 2763817 0.992229097 11 14 171 0.884615385 1.361727836 0.269230769 0.333333333 0.538461538 18 3 0 23 2L:2763764-2763884 6 6.5 636 FBgn0031457 325.67 20.19 30.60333333 0.019958854 0.321941555 0.212395164 12 1 6.5 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 2811983 2811990 + 2L_2811983_2811990_+ 0.500120318 0.500120318 0.500120318 0 daw FBtr0077720|FBtr0077721|FBtr0335151 2811758|2811758|2811758 2812145|2812145|2812376 2L + 2811906 2812042 3'utr daw FlyBase G1341.1 ATTAGCGTTGTCATTTAATCGTAGTTACCTGTAGTGCCTGAGCTGCCACTAGTTGATAGTTAAAAGCTAAAGTCAATGTACTTAAGCTCTCGAAGTATGTAGGTAGTTAGCCAATGGCTTCAATTAATTTAATAGCT 1340 2811982 0.830240232 34 1281 9622 0.956386293 2.072165028 0.251713396 0.163432836 0.301557632 1340 58 12 1535 2L:2811906-2812042 8 daw FBtr0335151|FBtr0077720|FBtr0077721 2811758|2811758|2811758 2812376|2812145|2812145 GTACTTAA 8mer-A1 dme-miR-252-5p 2L + 2811900 2812040 3'utr daw FlyBase G1042.1 ATTTACATTAGCGTTGTCATTTAATCGTAGTTACCTGTAGTGCCTGAGCTGCCACTAGTTGATAGTTAAAAGCTAAAGTCAATGTACTTAAGCTCTCGAAGTATGTAGGTAGTTAGCCAATGGCTTCAATTAATTTAATAG 935 2811982 0.954507947 31 891 6677 0.953058321 1.848351197 0.280227596 0.351871658 0.568990043 935 48 18 1340 2L:2811900-2812040 8 799 637 FBgn0031461 129.3333333 5.623333333 8.523333333 6.177835052 142.0865442 93.74266719 1 1 1 0.01 dme-miR-12-5p 8mer-A1 AATACTCA 2L 281843 281850 + 2L_281843_281850_+ 0.643927113 0.643927113 0.643927113 0 smo FBtr0078129 281513 282167 2L + 281799 281872 3'utr smo FlyBase G662.1 CGATTACTGGAACAGACTGAGCGAAACTAGAACTACGAATTACGAATACTCATAGTCATTAGGCTGCAACTTTA 26 281857 0.726756547 10 24 165 0.84375 1.431363764 0.125 0.153846154 0.3125 26 5 0 27 2L:281799-281872 8 smo FBtr0078129 281513 282167 AATACTCA 8mer-A1 dme-miR-12-5p 2L + 281833 281870 3'utr smo FlyBase G532.1 ACGAATTACGAATACTCATAGTCATTAGGCTGCAACTT 13 281856 0.624053993 5 13 81 1 1.278753601 0.157894737 0.307692308 0.526315789 13 0 0 19 2L:281833-281870 8 17 638 FBgn0003444 542.8533333 16.28333333 24.88333333 0.031316009 1.044012282 0.683188212 -14 -13 -13.5 0.01 dme-miR-986-5p 6mer3-8 ATTCGA 2L 281908 281913 + 2L_281908_281913_+ 1 1 1 0 smo FBtr0078129 281513 282167 2L + 281883 281986 3'utr smo FlyBase G663.1 TCATCACCCCATCTAGCTTGTAAGCATTCGAATCTCTGTGTACGTTTGTGAATGACTGTTTCCTTAATCCTGGTACTCACGCCAAAGTAAATGCCAAAGAGGAT 94 281919 0.973217608 17 86 746 0.918181818 2.004321374 0.254545455 0.14893617 0.272727273 94 9 0 101 2L:281883-281986 6 smo FBtr0078129 281513 282167 ATTCGA 6mer3-8 dme-miR-986-5p 2L + 281881 281985 3'utr smo FlyBase G533.1 ATTCATCACCCCATCTAGCTTGTAAGCATTCGAATCTCTGTGTACGTTTGTGAATGACTGTTTCCTTAATCCTGGTACTCACGCCAAAGTAAATGCCAAAGAGGA 66 281919 0.98589252 13 59 573 0.854166667 1.436692598 0.291666667 0.363636364 0.5625 66 12 2 82 2L:281881-281985 6 28.5 639 FBgn0003444 542.8533333 16.28333333 24.88333333 0.052500368 1.750255885 1.145344943 -11 -11 -11 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2L 2856844 2856849 + 2L_2856844_2856849_+ 1 1 1 0 RpS21 FBtr0335131|FBtr0077623 2856639|2856639 2857029|2857029 2L + 2856828 2856891 3'utr RpS21 FlyBase G1348.1 TATTCTGACTTCCAATAAGACTTTTCAGCCACTAAGAATTTACGGGTGCTTTCAGGAACCAATT 45 2856851 0.899704603 4 42 321 0.980769231 1.707570176 0.076923077 0.155555556 0.269230769 45 1 0 51 2L:2856828-2856891 6 RpS21 FBtr0077623|FBtr0335131 2856639|2856639 2857029|2857029 AAGACT 6mer3-8 dme-miR-14-3p 2L + 2856802 2856859 3'utr RpS21 FlyBase G1051.1 CTAAGATGCTTAGTGTGTGGAGTAATTATTCTGACTTCCAATAAGACTTTTCAGCCAC 24 2856851 0.980093334 3 24 170 1 1.612783857 0.146341463 0.5 0.707317073 24 0 0 41 2L:2856802-2856859 6 29.5 640 FBgn0015521 2211.816667 583.0333333 884.8866667 0.013337453 0.05059745 0.033337603 -7 -7 -7 0.01 dme-miR-2b-2-5p 6mer2-7 TGAAGA 2L 2868070 2868075 + 2L_2868070_2868075_+ 1 1 1 0 CG2991 FBtr0077626|FBtr0077627|FBtr0077625 2867666|2867666|2867666 2868548|2868548|2868548 2L + 2867900 2868125 3'utr CG2991 FlyBase G1366.1 TTTCGTCTCTCAAATTATCATGCAGATTTCCAGAAGCAAAGTGTATTACAAGAAGCCAAATATTACGTAGAATAAGTGTAGGTCAGTATCAATTGCGAAAGCGAAACGGAAACGGAAACAGAAACGAGAACATCCTGAGATTATGATTACGAACGCGTTGCCAAGTAGCCTGAAGAGCGAATAAGCGAGAAGATAGTGCTTAGATGCGCCAGTGAGTCAGTCCCCA 138 2868065 0.969029327 32 122 632 0.894409938 2.158362492 0.322981366 0.139705882 0.273291925 136 17 0 144 2L:2867900-2868125 6 CG2991 FBtr0077627|FBtr0077625|FBtr0077626 2867666|2867666|2867666 2868548|2868548|2868548 TGAAGA 6mer2-7 dme-miR-2b-2-5p 2L + 2868019 2868149 3'utr CG2991 FlyBase G1070.1 AGAAACGAGAACATCCTGAGATTATGATTACGAACGCGTTGCCAAGTAGCCTGAAGAGCGAATAAGCGAGAAGATAGTGCTTAGATGCGCCAGTGAGTCAGTCCCCATGCTGATTTATAGTTTATAGTTTT 75 2868065 0.945112188 18 72 309 0.957983193 2.056904851 0.378151261 0.4 0.621848739 75 5 0 114 2L:2868019-2868149 6 37 641 FBgn0031474 1557.266667 62.85666667 96.35333333 0.023759579 0.588640823 0.384003321 5 5 5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 2868509 2868515 + 2L_2868509_2868515_+ 0.801970437 0.801970437 0.801970437 0 CG2991 FBtr0077626|FBtr0077626|FBtr0077626|FBtr0077627|FBtr0077627|FBtr0077627|FBtr0077625|FBtr0077625|FBtr0077625 2867666|2867666|2867666|2867666|2867666|2867666|2867666|2867666|2867666 2868548|2868548|2868548|2868548|2868548|2868548|2868548|2868548|2868548 2L + 2868322 2868534 3'utr CG2991 FlyBase G1368.1 AAGTTTACTCCTTAAGAAACTGATTTGTATAAGCTGCGCCCATATATACATACACACGAACATATATAATATATATATATAAATTTTATTGTAGTTACTACACAAAATTTGTCAAAGCAAAGAAAAACAAAACAAAATCCACAAAAGGAAAGAATCCAACATACAATTTAAGTTACCATACAATTTTTGTGATAAAACTAACAAATAAAATAC 236 2868507 0.999997792 26 221 1812 0.940972222 1.65481804 0.038194444 0.177966102 0.326388889 236 12 5 271 2L:2868322-2868534 7 CG2991 FBtr0077627|FBtr0077627|FBtr0077627|FBtr0077625|FBtr0077625|FBtr0077625|FBtr0077626|FBtr0077626|FBtr0077626 2867666|2867666|2867666|2867666|2867666|2867666|2867666|2867666|2867666 2868548|2868548|2868548|2868548|2868548|2868548|2868548|2868548|2868548 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 2868490 2868533 3'utr CG2991 FlyBase G1072.1 TAAGTTACCATACAATTTTTGTGATAAAACTAACAAATAAAATA 112 2868507 0.651175358 8 108 917 0.95483871 1.693140461 0 0.276785714 0.477419355 112 5 2 148 2L:2868490-2868533 7 146.5 642 FBgn0031474 1557.266667 62.85666667 96.35333333 0.094075089 2.330699475 1.520445582 2 2 2 0.01 dme-miR-190-5p 6mer3-8 ACATAT 2L 2868670 2868675 - 2L_2868670_2868675_- 1 1 1 0 CG31694 FBtr0077685 2868625 2869170 2L - 2868648 2868724 3'utr CG31694 FlyBase G7116.1 TCATAACTTGACATGGCTTTTAATACGCATAATAAGCGGCTCTATGAATACATATATTTTGTAGTAAATAAGTGTAA 14 2868702 0.900111063 7 12 126 0.75 1.079181246 0.0625 0.071428571 0.1875 14 4 0 12 2L:2868648-2868724 6 CG31694 FBtr0077685 2868625 2869170 ACATAT 6mer3-8 dme-miR-190-5p 2L - 2868651 2868702 3'utr CG31694 FlyBase G5583.1 ATACGCATAATAAGCGGCTCTATGAATACATATATTTTGTAGTAAATAAGTG 6 2868669 0.98745762 6 6 39 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2L:2868651-2868702 6 4.5 643 FBgn0051694 1042 47.93 73.36 0.004318618 0.093886918 0.06134133 27 -6 10.5 0.01 dme-miR-965-3p 7mer-m8 TACGCTT 2L 2868815 2868821 - 2L_2868815_2868821_- 0.620191648 0.620204842 0.620198245 9.33E-06 CG31694 FBtr0077685 2868625 2869170 2L - 2868733 2868859 3'utr CG31694 FlyBase G7117.1 GAATTTAAATTAACACTGCGATTGTTACGACTGGCATTTACGCTTTGCGATTTGGGTTAACCTCTTTTGTTGTTGATCTTTTTAAATTACAAGCGTAGGAAAACATAGTCTGCTTTAATGCTGCGAA 128 2868837 0.747326193 32 126 1043 0.9875 2.198657087 0.2375 0.1875 0.35 128 2 0 158 2L:2868733-2868859 7 CG31694 FBtr0077685 2868625 2869170 TACGCTT 7mer-m8 dme-miR-965-3p 2L - 2868724 2868855 3'utr CG31694 FlyBase G5584.1 TTAAATTAACACTGCGATTGTTACGACTGGCATTTACGCTTTGCGATTTGGGTTAACCTCTTTTGTTGTTGATCTTTTTAAATTACAAGCGTAGGAAAACATAGTCTGCTTTAATGCTGCGAAAAAGTTATT 99 2868837 0.780898553 23 92 734 0.938650307 1.707570176 0.263803681 0.454545455 0.668711656 99 8 2 153 2L:2868724-2868855 7 40 644 FBgn0051694 1042 47.93 73.36 0.038387716 0.834550386 0.54525627 16 16 16 0.01 dme-miR-79-3p 7mer-m8 TAGCTTT 2L 2876816 2876822 + 2L_2876816_2876822_+ 0.620204031 0.620204031 0.620204031 0 CG8814 FBtr0077629 2876361 2877168 2L + 2876787 2876841 3'utr CG8814 FlyBase G1379.1 TCTTCGGTTACGGGCACGAGCTTGGTCTTTAGCTTTCTTCTATCCTAGAAAGCGC 27 2876810 0.732747655 7 27 259 1 1.505149978 0 0.148148148 0.28125 27 0 0 32 2L:2876787-2876841 7 CG8814 FBtr0077629 2876361 2877168 TAGCTTT 7mer-m8 dme-miR-79-3p 2L + 2876788 2876826 3'utr CG8814 FlyBase G1079.1 CTTCGGTTACGGGCACGAGCTTGGTCTTTAGCTTTCTTC 23 2876809 0.750623232 6 21 186 0.972222222 1.544068044 0.138888889 0.434782609 0.638888889 23 1 0 35 2L:2876788-2876826 7 23 645 FBgn0031478 361.3733333 24.66 37.60666667 0.063646091 0.932684509 0.611593689 6 7 6.5 0.01 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 2877098 2877105 - 2L_2877098_2877105_- 0.625364919 0.625364919 0.625364919 0 Prx6005 FBtr0077684 2877089 2877187 2L - 2877090 2877115 3'utr Prx6005 FlyBase G7126.1 CAATAAAGTATACGCTTACAACCGTA 8 2877105 0.758865998 2 6 28 0.916666667 1.041392685 0 0.25 0.5 8 1 0 11 2L:2877090-2877115 8 Prx6005 FBtr0077684 2877089 2877187 TACGCTTA 8mer-A1 dme-miR-965-3p 2L - 2877090 2877116 3'utr Prx6005 FlyBase G5590.1 ACAATAAAGTATACGCTTACAACCGTA 6 2877105 0.731785716 2 6 28 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2L:2877090-2877116 8 6 646 FBgn0031479 67.29333333 9.753333333 14.81333333 0.089161878 0.615174299 0.405040504 0 0 0 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 2880714 2880719 - 2L_2880714_2880719_- 1 1 1 0 NTPase FBtr0332459|FBtr0332460|FBtr0077683|FBtr0077682|FBtr0077680 2880702|2880702|2880703|2880702|2880702 2881227|2881227|2881227|2881227|2881227 2L - 2880701 2880737 5'utr-coding NTPase FlyBase G7128.1 AATAAATCAAATGTTAACTGATCTGAATTAAAGTAAA 9 2880710 0.701303948 5 8 69 0.888888889 0.903089987 0.111111111 0 0 9 1 0 8 2L:2880701-2880737 6 NTPase FBtr0077682|FBtr0077680|FBtr0332460|FBtr0077683|FBtr0332459 2880702|2880702|2880702|2880703|2880702 2881227|2881227|2881227|2881227|2881227 TGATCT 6mer3-8 dme-bantam-3p 2L - 2880702 2880729 5'utr-coding NTPase FlyBase G5592.1 AAATGTTAACTGATCTGAATTAAAGTAA 9 2880710 0.660348524 4 8 64 1 1.113943352 0.076923077 0.333333333 0.538461538 9 0 0 13 2L:2880702-2880729 6 9 647 FBgn0024947 993.2366667 56.17666667 85.57666667 0.009061284 0.160208865 0.105168854 -9 -9 -9 0.01 dme-miR-283-5p 6mer3-8 TGATAT 2L 2880833 2880838 - 2L_2880833_2880838_- 1 1 1 0 NTPase FBtr0332459|FBtr0332460|FBtr0077683|FBtr0077682|FBtr0077680 2880702|2880702|2880703|2880702|2880702 2881227|2881227|2881227|2881227|2881227 2L - 2880789 2880844 5'utr NTPase FlyBase G7129.1 ACACAATGATATGTATTTACCTAATATGTATAACGACCTAGACTACTAGCCGCAAA 14 2880829 0.740140529 5 14 115 1 1.255272505 0.166666667 0.214285714 0.388888889 14 0 0 18 2L:2880789-2880844 6 NTPase FBtr0077682|FBtr0077680|FBtr0332460|FBtr0077683|FBtr0332459 2880702|2880702|2880702|2880703|2880702 2881227|2881227|2881227|2881227|2881227 TGATAT 6mer3-8 dme-miR-283-5p 2L - 2880791 2880843 5'utr NTPase FlyBase G5593.1 CACAATGATATGTATTTACCTAATATGTATAACGACCTAGACTACTAGCCGCA 13 2880829 0.893102647 3 12 118 0.866666667 1.113943352 0.266666667 0.153846154 0.266666667 13 2 0 13 2L:2880791-2880843 6 10.5 648 FBgn0024947 993.2366667 56.17666667 85.57666667 0.010571499 0.186910342 0.122696997 -9 -9 -9 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2L 2880929 2880935 - 2L_2880929_2880935_- 0.521223855 0.521223855 0.521223855 0 NTPase FBtr0332459|FBtr0332460|FBtr0077683|FBtr0077682|FBtr0077680 2880702|2880702|2880703|2880702|2880702 2881227|2881227|2881227|2881227|2881227 2L - 2880912 2881012 5'utr NTPase FlyBase G7130.1 TCGTTTCAATTGCCTCTAATTGAGCTAACCCATACACGGTGACTACACTTAGCGTTTAGTTTGTAATTCCAATTTTGTGTGATTCGCCATATTTGTAATGC 50 2880938 0.946440731 18 48 332 0.964285714 1.73239376 0.321428571 0.12 0.214285714 50 2 0 54 2L:2880912-2881012 7 NTPase FBtr0077682|FBtr0077680|FBtr0332460|FBtr0077683|FBtr0332459 2880702|2880702|2880702|2880703|2880702 2881227|2881227|2881227|2881227|2881227 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 2880912 2880995 5'utr NTPase FlyBase G5594.1 AATTGAGCTAACCCATACACGGTGACTACACTTAGCGTTTAGTTTGTAATTCCAATTTTGTGTGATTCGCCATATTTGTAATGC 34 2880937 0.934436892 11 32 224 0.93877551 1.662757832 0.204081633 0.294117647 0.510204082 34 3 0 46 2L:2880912-2880995 7 16.5 649 FBgn0024947 993.2366667 56.17666667 85.57666667 0.016612355 0.293716252 0.192809566 3 2 2.5 0.01 dme-miR-1012-3p 6mer2-7 TGACTA 2L 2880968 2880973 - 2L_2880968_2880973_- 1 0.99999869 0.999999345 9.19E-07 NTPase FBtr0332459|FBtr0332460|FBtr0077683|FBtr0077682|FBtr0077680 2880702|2880702|2880703|2880702|2880702 2881227|2881227|2881227|2881227|2881227 2L - 2880912 2881012 5'utr NTPase FlyBase G7130.1 TCGTTTCAATTGCCTCTAATTGAGCTAACCCATACACGGTGACTACACTTAGCGTTTAGTTTGTAATTCCAATTTTGTGTGATTCGCCATATTTGTAATGC 50 2880980 0.946440731 18 48 332 0.964285714 1.73239376 0.321428571 0.12 0.214285714 50 2 0 54 2L:2880912-2881012 6 NTPase FBtr0077682|FBtr0077680|FBtr0332460|FBtr0077683|FBtr0332459 2880702|2880702|2880702|2880703|2880702 2881227|2881227|2881227|2881227|2881227 TGACTA 6mer2-7 dme-miR-1012-3p 2L - 2880912 2880995 5'utr NTPase FlyBase G5594.1 AATTGAGCTAACCCATACACGGTGACTACACTTAGCGTTTAGTTTGTAATTCCAATTTTGTGTGATTCGCCATATTTGTAATGC 34 2880980 0.934436892 11 32 224 0.93877551 1.662757832 0.204081633 0.294117647 0.510204082 34 3 0 46 2L:2880912-2880995 6 23 650 FBgn0024947 993.2366667 56.17666667 85.57666667 0.023156616 0.409422655 0.26876485 7 7 7 0.01 dme-miR-932-5p 6mer2-7 GAATTG 2L 293397 293402 - 2L_293397_293402_- 1 1 1 0 U2af38 FBtr0078133|FBtr0333408 293351|292957 293621|293621 2L - 293390 293438 3'utr U2af38 FlyBase G6509.1 AAACCCCCCGCGAAATATTTTACCGAGCGCCCATTAGAATTGTAATTTA 18 293419 0.976038361 5 18 119 1 1.301029996 0.25 0.111111111 0.2 18 0 0 20 2L:293390-293438 6 U2af38 FBtr0078133|FBtr0333408 293351|292957 293621|293621 GAATTG 6mer2-7 dme-miR-932-5p 2L - 293391 293431 3'utr U2af38 FlyBase G5089.1 CCGCGAAATATTTTACCGAGCGCCCATTAGAATTGTAATTT 6 293419 0.967724073 3 5 31 1 0.84509804 0 0.2 0.428571429 5 0 0 7 2L:293391-293431 6 6 651 FBgn0017457 340.28 32.69666667 50.14 0.017632538 0.183504944 0.119664938 17 17 17 0.01 dme-miR-999-3p 6mer2-7 GTTAAC 2L 297163 297168 + 2L_297163_297168_+ 1 1 1 0 Hop FBtr0078131 297048 297449 2L + 297095 297289 3'utr Hop FlyBase G678.2 ACACACAAACCCCATTGATAAACATTCAGGAGAGAACCATTACGCATTATTATGGCGTCTCTAAGCTGGTTAACCAATATATCGTTTTTGATGAAACGGGCCACAATTAATGCTAAACGTAATTACCTAAGAAATCACATCGCCTATTCGCAGAACGACGATAACTACCATTAACAGAAATTTAAACTAAAAGGA 74 297164 0.948156903 25 67 352 0.886597938 1.633468456 0.113402062 0.243243243 0.422680412 74 10 1 86 2L:297095-297289 6 Hop FBtr0078131 297048 297449 GTTAAC 6mer2-7 dme-miR-999-3p 2L + 297084 297292 3'utr Hop FlyBase G548.1 ATCACTAACTCACACACAAACCCCATTGATAAACATTCAGGAGAGAACCATTACGCATTATTATGGCGTCTCTAAGCTGGTTAACCAATATATCGTTTTTGATGAAACGGGCCACAATTAATGCTAAACGTAATTACCTAAGAAATCACATCGCCTATTCGCAGAACGACGATAACTACCATTAACAGAAATTTAAACTAAAAGGAGAA 45 297164 0.968926417 22 42 236 0.944444444 1.531478917 0.166666667 0.4 0.625 45 3 1 68 2L:297084-297292 6 9 652 FBgn0024352 5110.506667 309.7066667 476.4533333 0.001761078 0.029059755 0.018889573 -1 -1 -1 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 297183 297188 + 2L_297183_297188_+ 1 1 1 0 Hop FBtr0078131 297048 297449 2L + 297095 297289 3'utr Hop FlyBase G678.2 ACACACAAACCCCATTGATAAACATTCAGGAGAGAACCATTACGCATTATTATGGCGTCTCTAAGCTGGTTAACCAATATATCGTTTTTGATGAAACGGGCCACAATTAATGCTAAACGTAATTACCTAAGAAATCACATCGCCTATTCGCAGAACGACGATAACTACCATTAACAGAAATTTAAACTAAAAGGA 74 297201 0.948156903 25 67 352 0.886597938 1.633468456 0.113402062 0.243243243 0.422680412 74 10 1 86 2L:297095-297289 6 Hop FBtr0078131 297048 297449 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L + 297084 297292 3'utr Hop FlyBase G548.1 ATCACTAACTCACACACAAACCCCATTGATAAACATTCAGGAGAGAACCATTACGCATTATTATGGCGTCTCTAAGCTGGTTAACCAATATATCGTTTTTGATGAAACGGGCCACAATTAATGCTAAACGTAATTACCTAAGAAATCACATCGCCTATTCGCAGAACGACGATAACTACCATTAACAGAAATTTAAACTAAAAGGAGAA 45 297164 0.968926417 22 42 236 0.944444444 1.531478917 0.166666667 0.4 0.625 45 3 1 68 2L:297084-297292 6 2.5 653 FBgn0024352 5110.506667 309.7066667 476.4533333 0.000489188 0.008072154 0.005247104 -18 19 0.5 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 2L 297395 297400 + 2L_297395_297400_+ 1 1 1 0 Hop FBtr0078131 297048 297449 2L + 297302 297415 3'utr Hop FlyBase G679.1 ATTGATAAATGTCTGCCTAATTGATTTACGCAGACGGGTGGAGTAGGCTCCAAACGTCATGGTCCTTATTTTCTTACTACAATAAATATGCTGTAGCTTAGCTCTAAAATAAGT 35 297390 0.807157538 11 32 257 0.928571429 0.989004616 0.166666667 0.142857143 0.285714286 35 0 3 39 2L:297302-297415 6 Hop FBtr0078131 297048 297449 TAGCTT 6mer3-8 dme-miR-79-3p 2L + 297300 297432 3'utr Hop FlyBase G549.1 TCATTGATAAATGTCTGCCTAATTGATTTACGCAGACGGGTGGAGTAGGCTCCAAACGTCATGGTCCTTATTTTCTTACTACAATAAATATGCTGTAGCTTAGCTCTAAAATAAGTTTCTGTTTGTACAATAA 24 297390 0.912276558 13 22 196 0.935483871 1.462397998 0.096774194 0.208333333 0.387096774 24 2 0 29 2L:297300-297432 6 10 654 FBgn0024352 5110.506667 309.7066667 476.4533333 0.001956753 0.032288617 0.020988414 5 5 5 0.01 dme-miR-184-5p 8mer-A1 TGATAAGA 2L 2974707 2974714 + 2L_2974707_2974714_+ 0.601217767 0.601217767 0.601217767 0 gammaTub23C FBtr0077641 2974603 2974858 2L + 2974692 2974733 3'utr gammaTub23C FlyBase G1415.1 ATCCTTAAGTAGTAGTGATAAGACGATTGTTGGTATGACTCG 6 2974722 0.678962101 4 6 38 1 0.77815125 0.666666667 0 0 6 0 0 6 2L:2974692-2974733 8 gammaTub23C FBtr0077641 2974603 2974858 TGATAAGA 8mer-A1 dme-miR-184-5p 2L + 2974699 2974751 3'utr gammaTub23C FlyBase G1100.1 AGTAGTAGTGATAAGACGATTGTTGGTATGACTCGCATGTATGTAAACGCTGT 6 2974718 0.986652589 3 4 39 0.909090909 1 0.363636364 0.5 0.727272727 6 1 0 10 2L:2974699-2974751 8 5 655 FBgn0260639 328 21.35666667 32.38 0.015243902 0.234118932 0.154416306 -15 -11 -13 0.01 dme-miR-980-3p 6mer2-7 GCAGCT 2L 2974991 2974996 - 2L_2974991_2974996_- 1 1 1 0 CG9641 FBtr0077677|FBtr0077676 2974857|2974857 2975177|2975177 2L - 2974978 2975024 3'utr CG9641 FlyBase G7155.1 GACAACGGAACAAGGACAGCAGTATCGTGCAGCTTCACAAGTGAATT 6 2974997 0.937676622 3 5 21 1 0.903089987 0.625 0.333333333 0.5 6 0 0 8 2L:2974978-2975024 6 CG9641 FBtr0077677|FBtr0077676 2974857|2974857 2975177|2975177 GCAGCT 6mer2-7 dme-miR-980-3p 2L - 2974986 2975026 3'utr CG9641 FlyBase G5611.1 ATGACAACGGAACAAGGACAGCAGTATCGTGCAGCTTCACA 8 2975002 0.948118601 3 7 25 0.909090909 1 0.272727273 0.375 0.545454545 8 1 0 10 2L:2974986-2975026 6 5.5 656 FBgn0031483 465.01 30.09666667 46.35666667 0.011827703 0.18274449 0.118645287 1 6 3.5 0.01 dme-miR-305-5p 6mer2-7 GTACAA 2L 2980026 2980031 - 2L_2980026_2980031_- 0.999999999 1 1 0 Chd1 FBtr0331654|FBtr0305980|FBtr0077674 2979560|2979697|2979697 2980175|2980175|2980175 2L - 2979964 2980069 3'utr Chd1 FlyBase G7171.1 ACCCGCATACAGTACGTTAAGCGTAGCTCCATACACCTGTACAAGTAATTCCTAGCAGCTAACTATACTTCTATAAATGACTATACATCCGATCGCACAGAGGGCC 21 2980038 0.965034444 14 21 120 1 1.380211242 0 0.142857143 0.25 21 0 0 24 2L:2979964-2980069 6 Chd1 FBtr0331654|FBtr0305980|FBtr0077674 2979560|2979697|2979697 2980175|2980175|2980175 GTACAA 6mer2-7 dme-miR-305-5p 2L - 2979957 2980065 3'utr Chd1 FlyBase G5623.1 GCATACAGTACGTTAAGCGTAGCTCCATACACCTGTACAAGTAATTCCTAGCAGCTAACTATACTTCTATAAATGACTATACATCCGATCGCACAGAGGGCCGGCATTG 21 2980038 0.972356882 13 20 111 0.964285714 1.431363764 0.5 0.238095238 0.428571429 21 1 0 27 2L:2979957-2980065 6 12.5 657 FBgn0250786 1504.04 28.31666667 43.57333333 0.008310949 0.441436139 0.286872705 7 7 7 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 2L 2989540 2989545 + 2L_2989540_2989545_+ 0.999997299 0.999682475 0.999839887 0.000222597 Bem46 FBtr0077643 2989510 2990075 2L + 2989522 2989560 3'utr Bem46 FlyBase G1427.1 ATCAAGTGTTCAATTGACTGTGTTAACACTGCGAATGGT 21 2989536 0.723940947 6 21 174 1 1.397940009 0.16 0.142857143 0.28 21 0 0 25 2L:2989522-2989560 6 Bem46 FBtr0077643 2989510 2990075 TGTGTT 6mer3-8 dme-miR-317-3p 2L + 2989516 2989552 3'utr Bem46 FlyBase G1112.1 GAATACATCAAGTGTTCAATTGACTGTGTTAACACTG 15 2989536 0.947763754 6 13 124 0.875 0.84509804 0.041666667 0.4 0.625 15 1 2 21 2L:2989516-2989552 6 18 658 FBgn0025109 189.0366667 13.54 20.76666667 0.095219622 1.329394387 0.866773676 4 4 4 0.01 dme-miR-190-5p 6mer3-8 ACATAT 2L 2998275 2998280 + 2L_2998275_2998280_+ 1 1 1 0 CG3558 FBtr0331653|FBtr0077644|FBtr0273230|FBtr0077645 2998247|2998247|2998247|2998247 2998726|2998726|2998726|2998726 2L + 2998125 2998284 stop_codon CG3558 FlyBase G1444.1 TGGCACCGAGCGATCACGCGATCTGGCCCTATGTGCTGTGCTCATGGACGAGTGGCTTAAGGAGCTGGCTGCCATTGCGCAGGAGCAGAGCGTTGTGCTGGTCACGGAGCAGGGGTCTTTATGATCGCTTGGAACGGAAAGCTTGTGTATACATATTTTA 61 2998267 0.976727293 16 57 375 0.947368421 1.255272505 0.118421053 0.196721311 0.355263158 61 1 3 72 2L:2998125-2998284 6 CG3558 FBtr0273230|FBtr0077645|FBtr0331653|FBtr0077644 2998247|2998247|2998247|2998247 2998726|2998726|2998726|2998726 ACATAT 6mer3-8 dme-miR-190-5p 2L + 2998243 2998281 stop_codon CG3558 FlyBase G1126.2 TTATGATCGCTTGGAACGGAAAGCTTGTGTATACATATT 34 2998267 0.859968453 5 32 196 0.962962963 1.716003344 0.018518519 0.441176471 0.648148148 34 2 0 52 2L:2998243-2998281 6 31 659 FBgn0025681 2409.06 69.7 106.8566667 0.01286809 0.444763271 0.290108245 8 8 8 0.01 dme-miR-33-5p 7mer-m1 AATGCAC 2L 2998420 2998426 + 2L_2998420_2998426_+ 0.829692068 0.829691826 0.829691947 2.12E-07 CG3558 FBtr0331653|FBtr0077644|FBtr0273230|FBtr0077645 2998247|2998247|2998247|2998247 2998726|2998726|2998726|2998726 2L + 2998407 2998443 3'utr CG3558 FlyBase G1447.1 AGATTTACAAGTTAATGCACACGGACTCAACTAAAAA 6 2998422 0.877258049 3 6 24 1 0.77815125 0 0 0 6 0 0 6 2L:2998407-2998443 7 CG3558 FBtr0273230|FBtr0077645|FBtr0331653|FBtr0077644 2998247|2998247|2998247|2998247 2998726|2998726|2998726|2998726 AATGCAC 7mer-m1 dme-miR-33-5p 2L + 2998383 2998438 3'utr CG3558 FlyBase G1128.1 TTAACGAACAATGCAGTTTTGAACAGATTTACAAGTTAATGCACACGGACTCAACT 11 2998421 0.886031998 7 11 49 1 1.301029996 0.05 0.545454545 0.75 11 0 0 20 2L:2998383-2998438 7 7 660 FBgn0025681 2409.06 69.7 106.8566667 0.002905698 0.100430416 0.065508313 -2 -1 -1.5 0.01 dme-miR-317-3p 7mer-A1 GTGTTCA 2L 2998524 2998530 + 2L_2998524_2998530_+ 0.823349562 0.823349562 0.823349562 0 CG3558 FBtr0331653|FBtr0077644|FBtr0273230|FBtr0077645 2998247|2998247|2998247|2998247 2998726|2998726|2998726|2998726 2L + 2998465 2998535 3'utr CG3558 FlyBase G1448.1 GCGTTAAACAAATAGATTTAGGTTAAATGTTTTAAGTGAATCGGGACGGTGGATCTTAAGTGTTCAGATGT 17 2998520 0.981275975 8 12 134 0.761904762 0.726998728 0.666666667 0.176470588 0.333333333 17 3 2 16 2L:2998465-2998535 7 CG3558 FBtr0273230|FBtr0077645|FBtr0331653|FBtr0077644 2998247|2998247|2998247|2998247 2998726|2998726|2998726|2998726 GTGTTCA 7mer-A1 dme-miR-317-3p 2L + 2998474 2998546 3'utr CG3558 FlyBase G1129.1 AAATAGATTTAGGTTAAATGTTTTAAGTGAATCGGGACGGTGGATCTTAAGTGTTCAGATGTAAACAAATATT 16 2998519 0.980150922 9 15 106 0.954545455 1.322219295 0.590909091 0.3125 0.5 16 1 0 21 2L:2998474-2998546 7 11.5 661 FBgn0025681 2409.06 69.7 106.8566667 0.004773646 0.164992826 0.1076208 4 5 4.5 0.01 dme-miR-8-3p 7mer-A1 AGTATTA 2L 2998696 2998702 + 2L_2998696_2998702_+ 0.823349562 0.823349562 0.823349562 0 CG3558 FBtr0331653|FBtr0077644|FBtr0273230|FBtr0077645 2998247|2998247|2998247|2998247 2998726|2998726|2998726|2998726 2L + 2998678 2998732 3'utr CG3558 FlyBase G1449.1 ATGTAAAGCCAACTTGAAAGTATTAAATTGGTCCAAGTAAATGCACAGCCAAGAA 15 2998691 0.959410576 6 15 77 1 1.230448921 0.235294118 0.133333333 0.235294118 15 0 0 17 2L:2998678-2998732 7 CG3558 FBtr0273230|FBtr0077645|FBtr0331653|FBtr0077644 2998247|2998247|2998247|2998247 2998726|2998726|2998726|2998726 AGTATTA 7mer-A1 dme-miR-8-3p 2L + 2998678 2998706 3'utr CG3558 FlyBase G1130.1 ATGTAAAGCCAACTTGAAAGTATTAAATT 6 2998691 0.835623903 3 6 41 1 0.77815125 0 0 0 6 0 0 6 2L:2998678-2998706 7 8.5 662 FBgn0025681 2409.06 69.7 106.8566667 0.003528347 0.12195122 0.079545809 5 5 5 0.01 dme-miR-11-3p 7mer-m1 TGTGATG 2L 3021308 3021314 + 2L_3021308_3021314_+ 0.612071121 0.612071118 0.612071119 0 CG17264 FBtr0331628|FBtr0077647 3021226|3021226 3021506|3021506 2L + 3021268 3021328 3'utr CG17264 FlyBase G1457.1 TTATTTTTCAATTATCGAAATAGAGTTAAGATACTGTGTTTGTGATGACTTAAATACTTCT 133 3021307 0.777493441 12 125 1318 0.937888199 1.701855693 0.049689441 0.165413534 0.310559006 133 8 2 151 2L:3021268-3021328 7 CG17264 FBtr0077647|FBtr0331628 3021226|3021226 3021506|3021506 TGTGATG 7mer-m1 dme-miR-11-3p 2L + 3021271 3021375 3'utr CG17264 FlyBase G1132.1 TTTTTCAATTATCGAAATAGAGTTAAGATACTGTGTTTGTGATGACTTAAATACTTCTATTTTATTTGTAGGTTGATAGTAACATTCCCTGGATAAATAGTATGT 91 3021307 0.894286967 17 84 825 0.919117647 1.096910013 0.058823529 0.32967033 0.551470588 91 2 9 125 2L:3021271-3021375 7 98 663 FBgn0031490 217.3433333 9.67 14.60333333 0.450899498 10.1344364 6.710796622 1 1 1 0.01 dme-miR-8-3p 6mer2-7 AGTATT 2L 3021432 3021437 + 2L_3021432_3021437_+ 1 1 1 0 CG17264 FBtr0331628|FBtr0077647 3021226|3021226 3021506|3021506 2L + 3021412 3021446 3'utr CG17264 FlyBase G1459.1 AAACTACAATGATTCAAAATAGTATTCTAAGCGAC 13 3021432 0.90615954 4 12 78 0.933333333 0.84509804 0.733333333 0.153846154 0.266666667 13 0 1 14 2L:3021412-3021446 6 CG17264 FBtr0077647|FBtr0331628 3021226|3021226 3021506|3021506 AGTATT 6mer2-7 dme-miR-8-3p 2L + 3021416 3021445 3'utr CG17264 FlyBase G1133.1 TACAATGATTCAAAATAGTATTCTAAGCGA 6 3021432 0.712939716 4 5 36 0.777777778 0.84509804 0.222222222 0.5 0.666666667 6 2 0 7 2L:3021416-3021445 6 8.5 664 FBgn0031490 217.3433333 9.67 14.60333333 0.03910863 0.879007239 0.582058891 0 0 0 0.01 dme-miR-12-5p 6mer3-8 AATACT 2L 3021517 3021522 - 2L_3021517_3021522_- 1 1 1 0 alpha4GT1 FBtr0077670 3021307 3021785 2L - 3021452 3021573 3'utr alpha4GT1 FlyBase G7221.1 ATTTTGCGATAAGCTTTACCTCTCCGATTGCACATTATATATATGTATTTAAATACTGATTGTGAATATAATTCGATAATATAAGCAAGCGAACAACTCACATAGACATTTATTGAAAGCTG 49 3021514 0.983700733 14 49 380 1 1.792391689 0.064516129 0.244897959 0.403225806 49 0 0 62 2L:3021452-3021573 6 alpha4GT1 FBtr0077670 3021307 3021785 AATACT 6mer3-8 dme-miR-12-5p 2L - 3021459 3021584 3'utr alpha4GT1 FlyBase G5645.1 AATGGTTTTTTATTTTGCGATAAGCTTTACCTCTCCGATTGCACATTATATATATGTATTTAAATACTGATTGTGAATATAATTCGATAATATAAGCAAGCGAACAACTCACATAGACATTTATTG 44 3021514 0.948261835 13 42 352 0.9375 1.77815125 0.078125 0.318181818 0.53125 44 4 0 60 2L:3021459-3021584 6 30.5 665 FBgn0031491 448.0066667 31.68666667 48.21 0.068079344 0.962549968 0.632648828 -8 -8 -8 0.01 dme-miR-317-5p 7mer-m8 GTATCCC 2L 3021686 3021692 - 2L_3021686_3021692_- 0.705949576 0.705949576 0.705949576 0 alpha4GT1 FBtr0077670 3021307 3021785 2L - 3021658 3021697 3'utr alpha4GT1 FlyBase G7222.2 TAAATGTATCCCTACCTATTTGCTGTCATCCTGTTGGCAT 5 3021679 0.679228955 3 4 45 0.857142857 0.77815125 0.142857143 0.4 0.571428571 5 1 0 6 2L:3021658-3021697 7 alpha4GT1 FBtr0077670 3021307 3021785 GTATCCC 7mer-m8 dme-miR-317-5p 2L - 3021657 3021696 3'utr alpha4GT1 FlyBase G5647.1 AAATGTATCCCTACCTATTTGCTGTCATCCTGTTGGCATT 5 3021693 0.979531055 4 5 37 1 0.84509804 0.428571429 0.4 0.571428571 5 0 0 7 2L:3021657-3021696 7 4 666 FBgn0031491 448.0066667 31.68666667 48.21 0.008928439 0.126236061 0.082970338 -13 1 -6 0.01 dme-miR-31a-5p 6mer2-7 CTTGCC 2L 3026244 3026249 + 2L_3026244_3026249_+ 1 1 1 0 CG3542 FBtr0077648 3026115 3026439 2L + 3026222 3026341 3'utr CG3542 FlyBase G1465.1 TGGACAAGTTCTCTTTTCAGTCCTTGCCTTCCACTGCACTCTGCTTCGTTTGGTTTAGATACTGTCCTGGTCCCAGCACAAACCACACAGCGAACCACAATTGTAATTTCTTAGTCTCAA 15 3026245 0.988193845 8 15 133 1 1.204119983 0.25 0.066666667 0.125 15 0 0 16 2L:3026222-3026341 6 CG3542 FBtr0077648 3026115 3026439 CTTGCC 6mer2-7 dme-miR-31a-5p 2L + 3026200 3026262 3'utr CG3542 FlyBase G1137.1 AGCTAGCCCTGGACTCAGTTGCTGGACAAGTTCTCTTTTCAGTCCTTGCCTTCCACTGCACTC 7 3026245 0.981976273 3 7 56 1 1.079181246 0.083333333 0.571428571 0.75 7 0 0 12 2L:3026200-3026262 6 8 667 FBgn0031492 1159.55 48.74 75.20666667 0.006899228 0.164136233 0.106373548 -1 -1 -1 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 2L 302727 302732 + 2L_302727_302732_+ 1 1 1 0 Pi3K21B FBtr0331206|FBtr0331207|FBtr0331208|FBtr0331205 302658|302658|302658|302658 305233|305233|305233|303934 2L + 302653 302765 stop_codon Pi3K21B FlyBase G695.1 GCAGTAGGAGCCGCACATCAAATTGCCGCTAAACGAGCCCTCAACCTCAGGCTAGCTATCTATCTCTCTAATTCTAGCTTGCTCTAAAGCCCTAACTCTCTCTAACTCTAGAT 36 302699 0.976526844 18 35 229 0.976190476 1.612783857 0.119047619 0.138888889 0.261904762 36 1 0 41 2L:302653-302765 6 Pi3K21B FBtr0331205|FBtr0331208|FBtr0331207|FBtr0331206 302658|302658|302658|302658 303934|305233|305233|305233 TAGCTT 6mer3-8 dme-miR-79-3p 2L + 302658 302767 stop_codon Pi3K21B FlyBase G558.1 AGGAGCCGCACATCAAATTGCCGCTAAACGAGCCCTCAACCTCAGGCTAGCTATCTATCTCTCTAATTCTAGCTTGCTCTAAAGCCCTAACTCTCTCTAACTCTAGATAT 29 302705 0.982144712 11 24 172 0.833333333 1.602059991 0.083333333 0.413793103 0.645833333 29 8 0 40 2L:302658-302767 6 4 668 FBgn0020622 2718.376667 71.30333333 109.6833333 0.001471466 0.056098359 0.036468622 28 22 25 0.01 dme-miR-8-3p 6mer3-8 CAGTAT 2L 302832 302837 + 2L_302832_302837_+ 1 1 1 0 Pi3K21B FBtr0331206|FBtr0331207|FBtr0331208|FBtr0331205 302658|302658|302658|302658 305233|305233|305233|303934 2L + 302797 302837 3'utr Pi3K21B FlyBase G696.1 TGCAGGCTCTGTCAAAAGGCTTAAGCTGGATATGCCAGTAT 9 302805 0.746797221 6 8 53 1 0.954242509 0.555555556 0 0 9 0 0 9 2L:302797-302837 6 Pi3K21B FBtr0331205|FBtr0331208|FBtr0331207|FBtr0331206 302658|302658|302658|302658 303934|305233|305233|305233 CAGTAT 6mer3-8 dme-miR-8-3p 2L + 302797 302837 3'utr Pi3K21B FlyBase G559.1 TGCAGGCTCTGTCAAAAGGCTTAAGCTGGATATGCCAGTAT 8 302828 0.75013305 5 8 48 1 1.113943352 0.153846154 0.5 0.692307692 8 0 0 13 2L:302797-302837 6 4.5 669 FBgn0020622 2718.376667 71.30333333 109.6833333 0.0016554 0.063110654 0.0410272 27 4 15.5 0.01 dme-miR-11-3p 7mer-m1 TGTGATG 2L 303180 303186 + 2L_303180_303186_+ 0.612071121 0.612071121 0.612071121 0 Pi3K21B FBtr0331206|FBtr0331207|FBtr0331208|FBtr0331205 302658|302658|302658|302658 305233|305233|305233|303934 2L + 303070 303243 3'utr Pi3K21B FlyBase G697.1 TAGTGTTACAATAGCAATGCTATTATTTCGGCCATCGCCGATTGTGTACATCAGCATATATAGGCTATATATATATATATATATATATCTGTGCATGATTACTTTTTGTGTGTGATGGATGGCGCTGGCAGTTTAACTGCCCTCCGCTATCCCCTCAAGAATTAGACGGCTCCA 173 303178 0.991519902 24 148 1606 0.853658537 1.544068044 0.136585366 0.138728324 0.273170732 173 26 4 175 2L:303070-303243 7 Pi3K21B FBtr0331205|FBtr0331208|FBtr0331207|FBtr0331206 302658|302658|302658|302658 303934|305233|305233|305233 TGTGATG 7mer-m1 dme-miR-11-3p 2L + 303145 303247 3'utr Pi3K21B FlyBase G561.2 TATATATATATATCTGTGCATGATTACTTTTTGTGTGTGATGGATGGCGCTGGCAGTTTAACTGCCCTCCGCTATCCCCTCAAGAATTAGACGGCTCCAGAAA 109 303178 0.919607242 19 89 939 0.826086957 2.181843588 0.179347826 0.486238532 0.695652174 109 32 0 152 2L:303145-303247 7 116.5 670 FBgn0020622 2718.376667 71.30333333 109.6833333 0.04285646 1.633864709 1.06214861 2 2 2 0.01 dme-miR-8-3p 6mer2-7 AGTATT 2L 3032186 3032191 + 2L_3032186_3032191_+ 1 0.999982061 0.99999103 1.27E-05 GABPI FBtr0077651|FBtr0344735|FBtr0077652|FBtr0344734 3032133|3032133|3032133|3032133 3032300|3032300|3032300|3032300 2L + 3032148 3032251 3'utr GABPI FlyBase G1476.1 AAAAAGCAAAAAGCACAAGCATGTCGCTTAGATACTAAAGTATTTCAAATCTTAACGCTGTTCTCGGTAGTCGTACTTAGTCGTACCGCTTTGAAGTCTTTATT 38 3032169 0.982143496 14 35 260 0.934782609 1.633468456 0.173913043 0.184210526 0.326086957 38 3 0 43 2L:3032148-3032251 6 GABPI FBtr0344734|FBtr0077652|FBtr0344735|FBtr0077651 3032133|3032133|3032133|3032133 3032300|3032300|3032300|3032300 AGTATT 6mer2-7 dme-miR-8-3p 2L + 3032155 3032255 3'utr GABPI FlyBase G1147.1 AAAAAGCACAAGCATGTCGCTTAGATACTAAAGTATTTCAAATCTTAACGCTGTTCTCGGTAGTCGTACTTAGTCGTACCGCTTTGAAGTCTTTATTGCAA 31 3032169 0.983624285 12 29 226 0.956521739 1.166331422 0.260869565 0.387096774 0.586956522 31 0 2 44 2L:3032155-3032255 6 7.5 671 FBgn0031495 240.32 18.52333333 28.10666667 0.031208389 0.404894727 0.266840607 17 17 17 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2L 303748 303753 + 2L_303748_303753_+ 0.730949445 0.730949445 0.730949445 0 Pi3K21B FBtr0331206|FBtr0331206|FBtr0331206|FBtr0331207|FBtr0331207|FBtr0331207|FBtr0331208|FBtr0331208|FBtr0331208|FBtr0331205|FBtr0331205|FBtr0331205 302658|302658|302658|302658|302658|302658|302658|302658|302658|302658|302658|302658 305233|305233|305233|305233|305233|305233|305233|305233|305233|303934|303934|303934 2L + 303691 303792 3'utr Pi3K21B FlyBase G701.2 GTTATATTATAACTGATTTAAAGTAGTTTTAAGTGAAATCTACGTACGTTTACTCGATGTGATCAGTTGATTGTTGCTAACGTTAATTTTCCTTCAATTTTT 34 303741 0.719943953 16 30 334 0.909090909 1.124938737 0.295454545 0.264705882 0.431818182 34 2 2 40 2L:303691-303792 6 Pi3K21B FBtr0331205|FBtr0331205|FBtr0331205|FBtr0331208|FBtr0331208|FBtr0331208|FBtr0331207|FBtr0331207|FBtr0331207|FBtr0331206|FBtr0331206|FBtr0331206 302658|302658|302658|302658|302658|302658|302658|302658|302658|302658|302658|302658 303934|303934|303934|305233|305233|305233|305233|305233|305233|305233|305233|305233 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 303736 303790 3'utr Pi3K21B FlyBase G568.1 ACGTTTACTCGATGTGATCAGTTGATTGTTGCTAACGTTAATTTTCCTTCAATTT 14 303745 0.989052646 8 13 122 0.9375 1.176091259 0.5 0.142857143 0.25 14 1 0 15 2L:303736-303790 6 17 672 FBgn0020622 2718.376667 71.30333333 109.6833333 0.006253732 0.238418026 0.154991643 7 3 5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2L 304490 304495 + 2L_304490_304495_+ 1 1 1 0 Pi3K21B FBtr0331206|FBtr0331207|FBtr0331208 302658|302658|302658 305233|305233|305233 2L + 304332 304626 3'utr Pi3K21B FlyBase G704.1 CTTCGTAAGCGTGTTGAAAGAATGTTGACCTTTCTGTTTGCATTCTCCCTATTGAATTTGAGCGATCCACTTACTAGCACACACAAAAACTGTCGCGTCTTTAAGATATTCTTACATATATAAATTCGATGTATTCATTATACTGTATCTGCATACTTTACCTGTAATTCCTAATTTAACTTATTTAACTTGTAATTTGTGTGTTTCATTTTGCTTAAATTCTATGAGATTTTGGCGGATCTCGTACGTTGTAGTATTTATAAGTTTTAAATTTAGTTTGTAAAATGCGTTTCAA 146 304488 0.989493447 46 141 1371 0.960227273 1.926856709 0.159090909 0.164383562 0.306818182 146 6 1 169 2L:304332-304626 6 Pi3K21B FBtr0331208|FBtr0331207|FBtr0331206 302658|302658|302658 305233|305233|305233 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2L + 304421 304503 3'utr Pi3K21B FlyBase G569.1 CTGTCGCGTCTTTAAGATATTCTTACATATATAAATTCGATGTATTCATTATACTGTATCTGCATACTTTACCTGTAATTCCT 33 304489 0.988718234 10 32 306 0.978723404 1.361727836 0.063829787 0.303030303 0.510638298 33 0 1 46 2L:304421-304503 6 36 673 FBgn0020622 2718.376667 71.30333333 109.6833333 0.013243198 0.504885232 0.328217596 2 1 1.5 0.01 dme-miR-263a-5p 7mer-A1 TGCCATA 2L 304774 304780 + 2L_304774_304780_+ 0.782911824 0.782911824 0.782911824 0 Pi3K21B FBtr0331206|FBtr0331207|FBtr0331208 302658|302658|302658 305233|305233|305233 2L + 304745 304810 3'utr Pi3K21B FlyBase G705.2 TGTTTGCTAACTGATAGATGATGACTTTTTGCCATACCTAAATGTTAAATGGAAATATTTGTGAAT 43 304772 0.636625074 15 35 275 0.903846154 1.672097858 0.173076923 0.238095238 0.384615385 42 5 0 47 2L:304745-304810 7 Pi3K21B FBtr0331208|FBtr0331207|FBtr0331206 302658|302658|302658 305233|305233|305233 TGCCATA 7mer-A1 dme-miR-263a-5p 2L + 304736 304779 3'utr Pi3K21B FlyBase G571.1 TGTCAATAATGTTTGCTAACTGATAGATGATGACTTTTTGCCAT 13 304772 0.928410656 5 13 99 1 1.361727836 0.217391304 0.538461538 0.739130435 13 0 0 23 2L:304736-304779 6 13 674 FBgn0020622 2718.376667 71.30333333 109.6833333 0.004782266 0.182319667 0.118523021 2 2 2 0.01 dme-miR-1006-3p 6mer2-7 GAATTT 2L 304807 304812 + 2L_304807_304812_+ 1 1 1 0 Pi3K21B FBtr0331206|FBtr0331207|FBtr0331208 302658|302658|302658 305233|305233|305233 2L + 304745 304810 3'utr Pi3K21B FlyBase G705.2 TGTTTGCTAACTGATAGATGATGACTTTTTGCCATACCTAAATGTTAAATGGAAATATTTGTGAAT 43 304802 0.636625074 15 35 275 0.903846154 1.672097858 0.173076923 0.238095238 0.384615385 42 5 0 47 2L:304745-304810 4 Pi3K21B FBtr0331208|FBtr0331207|FBtr0331206 302658|302658|302658 305233|305233|305233 GAATTT 6mer2-7 dme-miR-1006-3p 2L + 304791 304853 3'utr Pi3K21B FlyBase G572.1 AAATGGAAATATTTGTGAATTTTTCTATCTTTGCTCCTCGTCTGCATTTTTGGCGCAGGCCGG 18 304802 0.976167563 7 16 171 0.892857143 1.397940009 0.25 0.444444444 0.642857143 18 3 0 25 2L:304791-304853 6 16.5 675 FBgn0020622 2718.376667 71.30333333 109.6833333 0.006069799 0.231405731 0.150433065 5 5 5 0.01 dme-miR-1006-3p 6mer3-8 CGAATT 2L 304908 304913 + 2L_304908_304913_+ 0.507200502 0.507200502 0.507200502 0 Pi3K21B FBtr0331206|FBtr0331207|FBtr0331208 302658|302658|302658 305233|305233|305233 2L + 304869 304922 3'utr Pi3K21B FlyBase G705.4 AAACGATAACAATGAACGGCGACGAAACTGAATGTAAAACGAATTGCAAATTTG 26 304897 0.960678286 6 25 65 0.96875 1.491361694 0.375 0.192307692 0.34375 26 1 0 31 2L:304869-304922 6 Pi3K21B FBtr0331208|FBtr0331207|FBtr0331206 302658|302658|302658 305233|305233|305233 CGAATT 6mer3-8 dme-miR-1006-3p 2L + 304873 304915 3'utr Pi3K21B FlyBase G573.1 GATAACAATGAACGGCGACGAAACTGAATGTAAAACGAATTGC 14 304897 0.907166535 3 11 33 0.863636364 1.278753601 0.272727273 0.428571429 0.636363636 14 3 0 19 2L:304873-304915 6 13 676 FBgn0020622 2718.376667 71.30333333 109.6833333 0.004782266 0.182319667 0.118523021 11 11 11 0.01 dme-miR-307a-3p 7mer-A1 GTTGTGA 2L 3067527 3067533 + 2L_3067527_3067533_+ 0.823349562 0.823349562 0.823349562 0 CG3523 FBtr0077659|FBtr0335387 3067501|3067501 3068177|3068177 2L + 3067408 3067532 stop_codon CG3523 FlyBase G1509.1 AAGTACACACTGTTGAGGGCAACCACCGCACCTTCCTCATCGAGGATCAGTCCCTGAAGACCATCCAGAGCATACTGAAGCGTCTGTTCAACTAAGCTAGAAAGAGGATTAGAATAAGAGTTGTG 99 3067517 0.910324072 12 89 444 0.906976744 1.46612587 0.379844961 0.242424242 0.418604651 99 9 3 117 2L:3067408-3067532 6 CG3523 FBtr0077659|FBtr0335387 3067501|3067501 3068177|3068177 GTTGTGA 7mer-A1 dme-miR-307a-3p 2L + 3067403 3067532 stop_codon CG3523 FlyBase G1187.1 CGTGGAAGTACACACTGTTGAGGGCAACCACCGCACCTTCCTCATCGAGGATCAGTCCCTGAAGACCATCCAGAGCATACTGAAGCGTCTGTTCAACTAAGCTAGAAAGAGGATTAGAATAAGAGTTGTG 70 3067517 0.962433231 14 63 308 0.914893617 0.980255942 0.5 0.285714286 0.468085106 70 0 8 86 2L:3067403-3067532 6 38.5 677 FBgn0027571 21016.13 290.6166667 443.8066667 0.001831926 0.132476917 0.086749486 10 10 10 0.01 dme-miR-999-3p 8mer-A1 AGTTAACA 2L 3067726 3067733 + 2L_3067726_3067733_+ 0.643926235 0.643926231 0.643926233 0 CG3523 FBtr0077659|FBtr0335387 3067501|3067501 3068177|3068177 2L + 3067730 3067796 3'utr CG3523 FlyBase G1511.1 AACAGATTGGATTTGCGTCGATCGGATTGAATCTGCCTAACTGCTGTCTTGCAGGGCTGTAGGCTTC 26 3067740 0.797891894 13 22 221 0.833333333 1.096910013 0.366666667 0.153846154 0.266666667 26 4 1 25 2L:3067730-3067796 3 CG3523 FBtr0077659|FBtr0335387 3067501|3067501 3068177|3068177 AGTTAACA 8mer-A1 dme-miR-999-3p 2L + 3067730 3067795 3'utr CG3523 FlyBase G1190.1 AACAGATTGGATTTGCGTCGATCGGATTGAATCTGCCTAACTGCTGTCTTGCAGGGCTGTAGGCTT 17 3067741 0.711409244 10 14 135 0.884615385 1.06069784 0.269230769 0.352941176 0.576923077 17 2 1 23 2L:3067730-3067795 3 7.5 678 FBgn0027571 21016.13 290.6166667 443.8066667 0.000356869 0.025807192 0.01689925 -14 -15 -14.5 0.01 dme-miR-283-5p 7mer-A1 GATATTA 2L 3068149 3068155 + 2L_3068149_3068155_+ 0.782911824 0.782911824 0.782911824 0 CG3523 FBtr0077659|FBtr0335387 3067501|3067501 3068177|3068177 2L + 3067836 3068167 3'utr CG3523 FlyBase G1512.1 GTTGAAATGATGCAAGATGAGAGGCTCAGTCCATAACACTTAACGCTTTGTGCACCGTACAATTTAGTACCCGACATTCCTTGAGAGCTAGACGGCACCAGACGTCCCAACTTACCAAATATATCTTTTATGCTCTATCTATAATGTATGTCGCATATTCTAGTTTTATTGCCTAGTTGTAAGCCTACAGTTTGTAGTCGCGCATGTAATGAATTTCATTCCTCGAACTAACCCAAGAAAGAGACTACAACATTCGTTATCTCTCTTGATGTATAAAATAATCGCCCAAAAATTATCACTCATGAATATTGTGGATATTAAAATTACACCAT 1637 3068144 0.860889925 74 1526 12254 0.926841834 1.893303327 0.079855744 0.153329261 0.285935085 1637 120 22 1799 2L:3067836-3068167 7 CG3523 FBtr0077659|FBtr0335387 3067501|3067501 3068177|3068177 GATATTA 7mer-A1 dme-miR-283-5p 2L + 3067981 3068167 3'utr CG3523 FlyBase G1191.2 GTATGTCGCATATTCTAGTTTTATTGCCTAGTTGTAAGCCTACAGTTTGTAGTCGCGCATGTAATGAATTTCATTCCTCGAACTAACCCAAGAAAGAGACTACAACATTCGTTATCTCTCTTGATGTATAAAATAATCGCCCAAAAATTATCACTCATGAATATTGTGGATATTAAAATTACACCAT 560 3068144 0.774923827 39 534 4862 0.95377129 1.991226076 0.0243309 0.3625 0.565693431 560 31 7 784 2L:3067981-3068167 7 672 679 FBgn0027571 21016.13 290.6166667 443.8066667 0.03197544 2.312324368 1.514172838 5 5 5 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 3146647 3146652 - 2L_3146647_3146652_- 1 1 1 0 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 2L - 3146626 3146721 3'utr Mad FlyBase G7252.1 ACAAGAAAAGATACCAGCGAAATTTAAGAATGGAAAAATGCTACTGAATCAATACGTTTTCCCAGACAATGATCTTTTGTTATCTTAAGTAAAACT 178 3146652 0.950769641 8 175 1917 0.985294118 2.002166062 0.191176471 0.129213483 0.240196078 178 2 1 201 2L:3146626-3146721 6 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 TGATCT 6mer3-8 dme-bantam-3p 2L - 3146580 3146719 3'utr Mad FlyBase G5672.1 AAGAAAAGATACCAGCGAAATTTAAGAATGGAAAAATGCTACTGAATCAATACGTTTTCCCAGACAATGATCTTTTGTTATCTTAAGTAAAACTAATATTGTTTAGACCACGAGAAAATTGCCTTTTTATATAAATATAC 152 3146651 0.999995364 13 148 1524 0.981981982 2.037426498 0.256756757 0.322368421 0.536036036 152 3 1 218 2L:3146580-3146719 6 145.5 680 FBgn0011648 490.6766667 21.49 32.97333333 0.296529283 6.770590973 4.412656692 0 -1 -0.5 0.01 dme-miR-1006-3p 6mer3-8 CGAATT 2L 3146798 3146803 - 2L_3146798_3146803_- 1 1 1 0 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 2L - 3146773 3146826 3'utr Mad FlyBase G7253.1 ATTTGCGGTTCGCCTTGGATCAACGAATTCAATGTTCAATATAGTTGATTTAAA 5 3146820 0.978863562 4 5 36 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 2L:3146773-3146826 6 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 CGAATT 6mer3-8 dme-miR-1006-3p 2L - 3146766 3146824 3'utr Mad FlyBase G5673.1 TTGCGGTTCGCCTTGGATCAACGAATTCAATGTTCAATATAGTTGATTTAAATATATAT 6 3146807 0.990579045 5 5 45 0.777777778 0.84509804 0.111111111 0.5 0.666666667 6 2 0 7 2L:3146766-3146824 6 2 681 FBgn0011648 490.6766667 21.49 32.97333333 0.004076004 0.093066543 0.060655075 17 4 10.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 3147043 3147048 - 2L_3147043_3147048_- 1 1 1 0 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 2L - 3146958 3147095 3'utr Mad FlyBase G7254.1 ACAAAATGGTATAACTATTTACAATGATCTACATGCTATAATATTAATGATCTATGCCCATTGGCAAAACAGTTCTTGTTCAAGTCTATTTCAAGTGCTAATTATGTGTCATTGCAAAACTGCTTTAAATATAAAAAC 124 3147071 0.985414107 16 121 1009 0.973856209 2.173186268 0.039215686 0.177419355 0.333333333 124 4 0 149 2L:3146958-3147095 6 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 TGATCT 6mer3-8 dme-bantam-3p 2L - 3147023 3147095 3'utr Mad FlyBase G5674.1 ACAAAATGGTATAACTATTTACAATGATCTACATGCTATAATATTAATGATCTATGCCCATTGGCAAAACAGT 77 3147071 0.837392034 11 72 620 0.936936937 2.017033339 0.045045045 0.337662338 0.540540541 77 7 0 104 2L:3147023-3147095 6 46 682 FBgn0011648 490.6766667 21.49 32.97333333 0.093748089 2.140530479 1.395066721 23 23 23 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 3147066 3147071 - 2L_3147066_3147071_- 1 1 1 0 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 2L - 3146958 3147095 3'utr Mad FlyBase G7254.1 ACAAAATGGTATAACTATTTACAATGATCTACATGCTATAATATTAATGATCTATGCCCATTGGCAAAACAGTTCTTGTTCAAGTCTATTTCAAGTGCTAATTATGTGTCATTGCAAAACTGCTTTAAATATAAAAAC 124 3147071 0.985414107 16 121 1009 0.973856209 2.173186268 0.039215686 0.177419355 0.333333333 124 4 0 149 2L:3146958-3147095 6 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 TGATCT 6mer3-8 dme-bantam-3p 2L - 3147023 3147095 3'utr Mad FlyBase G5674.1 ACAAAATGGTATAACTATTTACAATGATCTACATGCTATAATATTAATGATCTATGCCCATTGGCAAAACAGT 77 3147071 0.837392034 11 72 620 0.936936937 2.017033339 0.045045045 0.337662338 0.540540541 77 7 0 104 2L:3147023-3147095 6 45 683 FBgn0011648 490.6766667 21.49 32.97333333 0.091710087 2.093997208 1.364739183 0 0 0 0.01 dme-miR-980-3p 8mer-A1 GGCAGCTA 2L 3147213 3147220 - 2L_3147213_3147220_- 0.668734347 0.668734347 0.668734347 0 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 2L - 3147182 3147243 3'utr Mad FlyBase G7255.1 GCAGATTTATATAGATGATGTACGGCAGCTACTCCAATACCCGCCCTTTGCCCATATTTTAT 71 3147227 0.718320133 9 68 366 0.962962963 1.892094603 0.209876543 0.14084507 0.24691358 71 3 0 78 2L:3147182-3147243 8 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 GGCAGCTA 8mer-A1 dme-miR-980-3p 2L - 3147149 3147239 3'utr Mad FlyBase G5675.1 ATTTATATAGATGATGTACGGCAGCTACTCCAATACCCGCCCTTTGCCCATATTTTATAGTTTATCGTATGATTTTCTATGCGAATGTCAT 46 3147227 0.969233548 12 44 259 0.971428571 1.832508913 0.285714286 0.347826087 0.571428571 46 2 0 68 2L:3147149-3147239 8 54 684 FBgn0011648 490.6766667 21.49 32.97333333 0.110052105 2.51279665 1.63768702 7 7 7 0.01 dme-miR-282-5p 6mer2-7 GAGGCT 2L 3147404 3147409 - 2L_3147404_3147409_- 0.999999991 0.999999429 0.99999971 4.24E-07 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 2L - 3147378 3147481 stop_codon Mad FlyBase G7257.1 TGGCTGGACAAGGTGCTCACCCAAATGGGCTCTCCGCATAATGCAATTAGTTCGGTATCCTAAGCTTAAGATGAGGCTCGAGTCCTCAATGGAGACGGAAGAGA 24 3147410 0.967203984 9 23 127 0.965517241 1.146128036 0.172413793 0.208333333 0.344827586 24 0 1 28 2L:3147378-3147481 6 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 GAGGCT 6mer2-7 dme-miR-282-5p 2L - 3147351 3147459 stop_codon Mad FlyBase G5677.1 AAATGGGCTCTCCGCATAATGCAATTAGTTCGGTATCCTAAGCTTAAGATGAGGCTCGAGTCCTCAATGGAGACGGAAGAGAAGGAACACAAAACCGGTAGCTAAATGA 19 3147410 0.994928317 8 18 109 0.942857143 1.51851394 0.2 0.578947368 0.771428571 19 2 0 33 2L:3147351-3147459 6 8 685 FBgn0011648 490.6766667 21.49 32.97333333 0.016304016 0.37226617 0.242620299 1 1 1 0.01 dme-miR-307a-3p 6mer3-8 GGTTGT 2L 3168259 3168264 + 2L_3168259_3168264_+ 1 0.970793302 0.985396651 0.020652256 Hydr2 FBtr0332371|FBtr0077576|FBtr0308315 3168200|3168200|3168200 3168988|3168988|3169462 2L + 3168216 3168275 3'utr Hydr2 FlyBase G1531.1 TTCACACGCATACACGACTATTTAACGCTTCTGTGTCAAAATTGGTTGTCGCTGTCGAAT 30 3168258 0.985161205 8 29 235 0.972222222 1.544068044 0.5 0.133333333 0.277777778 30 1 0 35 2L:3168216-3168275 6 Hydr2 FBtr0308315|FBtr0077576|FBtr0332371 3168200|3168200|3168200 3169462|3168988|3168988 GGTTGT 6mer3-8 dme-miR-307a-3p 2L + 3168222 3168365 3'utr Hydr2 FlyBase G1204.1 CGCATACACGACTATTTAACGCTTCTGTGTCAAAATTGGTTGTCGCTGTCGAATATAAATCTTTGAAGAACCATCGGAACGGAAGAGAGCCCGAAAGACCCCATACATATAGTTCTAACATATGATATCGTTGTGCAGCAATTA 33 3168258 0.980669903 16 32 232 0.94 1.672097858 0.46 0.363636364 0.58 33 3 0 47 2L:3168222-3168365 6 14 686 FBgn0014906 1672.66 89.72666667 137.1866667 0.008369902 0.156029423 0.102050734 1 1 1 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 3168509 3168514 + 2L_3168509_3168514_+ 0.994739196 0.999708533 0.997223864 0.003513826 Hydr2 FBtr0332371|FBtr0077576|FBtr0308315 3168200|3168200|3168200 3168988|3168988|3169462 2L + 3168484 3168563 3'utr Hydr2 FlyBase G1533.2 AACATACAATGTATCAGTTGAACTCGTACCTTAGTTAGTTAACGCGACCACATGTATCCATGTACTTATGTCTAAGCAAA 91 3168518 0.772219073 15 84 750 0.946902655 1.728353782 0.17699115 0.131868132 0.300884956 91 5 1 107 2L:3168484-3168563 6 Hydr2 FBtr0308315|FBtr0077576|FBtr0332371 3168200|3168200|3168200 3169462|3168988|3168988 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 3168444 3168561 3'utr Hydr2 FlyBase G1205.1 GAACGATTTTTATGCTTTTTAATGACTTTTTGAAGAGCCAAACATACAATGTATCAGTTGAACTCGTACCTTAGTTAGTTAACGCGACCACATGTATCCATGTACTTATGTCTAAGCA 56 3168517 0.985954201 15 52 438 0.91011236 1.063386979 0.101123596 0.339285714 0.584269663 56 2 6 81 2L:3168444-3168561 6 55 687 FBgn0014906 1672.66 89.72666667 137.1866667 0.032881757 0.612972732 0.400913597 -9 -8 -8.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 3359554 3359559 - 2L_3359554_3359559_- 1 1 1 0 CG34394 FBtr0332409|FBtr0306333|FBtr0306335|FBtr0112638|FBtr0112641|FBtr0112639 3358638|3358638|3358638|3358638|3358638|3358638 3360717|3360717|3360717|3360717|3360717|3360717 2L - 3359525 3359578 3'utr CG34394 FlyBase G7275.1 GGTAAGAAAAGCGCGTGTATGATCTAAGTAGCTGCATTTTAGTTAGACTAGAGC 13 3359561 0.980829675 6 11 77 0.923076923 1.079181246 0.461538462 0 0 13 1 0 12 2L:3359525-3359578 6 CG34394 FBtr0112638|FBtr0306335|FBtr0306333|FBtr0332409|FBtr0112639|FBtr0112641 3358638|3358638|3358638|3358638|3358638|3358638 3360717|3360717|3360717|3360717|3360717|3360717 TGATCT 6mer3-8 dme-bantam-3p 2L - 3359526 3359586 3'utr CG34394 FlyBase G5688.1 GTTTTAATGGTAAGAAAAGCGCGTGTATGATCTAAGTAGCTGCATTTTAGTTAGACTAGAG 14 3359560 0.717420369 5 13 94 0.941176471 0.903089987 0.294117647 0.214285714 0.352941176 14 0 1 16 2L:3359526-3359586 6 10 688 FBgn0085423 1284.263333 25.49333333 39.12 0.007786565 0.392259414 0.255623722 2 1 1.5 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 2L 3359841 3359847 - 2L_3359841_3359847_- 0.823349562 0.823349562 0.823349562 0 CG34394 FBtr0332409|FBtr0306333|FBtr0306335|FBtr0112638|FBtr0112641|FBtr0112639 3358638|3358638|3358638|3358638|3358638|3358638 3360717|3360717|3360717|3360717|3360717|3360717 2L - 3359809 3359856 3'utr CG34394 FlyBase G7277.1 TTGTTTTTCAGACTGAAAGAACTTTGGCTGAAATCGTAGTACGCTAGC 12 3359833 0.955231069 5 12 63 1 1.176091259 0.133333333 0.25 0.4 12 0 0 15 2L:3359809-3359856 7 CG34394 FBtr0112638|FBtr0306335|FBtr0306333|FBtr0332409|FBtr0112639|FBtr0112641 3358638|3358638|3358638|3358638|3358638|3358638 3360717|3360717|3360717|3360717|3360717|3360717 AGACTGA 7mer-A1 dme-miR-14-3p 2L - 3359810 3359859 3'utr CG34394 FlyBase G5690.1 CTTTTGTTTTTCAGACTGAAAGAACTTTGGCTGAAATCGTAGTACGCTAG 12 3359832 0.976220246 4 12 79 1 1.204119983 0.25 0.25 0.4375 12 0 0 16 2L:3359810-3359859 7 9 689 FBgn0085423 1284.263333 25.49333333 39.12 0.007007909 0.353033473 0.23006135 -14 -15 -14.5 0.01 dme-miR-317-5p 8mer-A1 GTATCCCA 2L 3360255 3360262 - 2L_3360255_3360262_- 0.675380922 0.675380922 0.675380922 0 CG34394 FBtr0332409|FBtr0306333|FBtr0306335|FBtr0112638|FBtr0112641|FBtr0112639 3358638|3358638|3358638|3358638|3358638|3358638 3360717|3360717|3360717|3360717|3360717|3360717 2L - 3360240 3360304 3'utr CG34394 FlyBase G7281.2 ATCCTCTGACACTGAATGTTAAGGTTAATGTTGAAAATTCATGTATCCCAATCAAGGTTTAACCT 11 3360246 0.789631528 5 9 69 0.785714286 1.041392685 0.142857143 0.181818182 0.357142857 11 3 0 11 2L:3360240-3360304 8 CG34394 FBtr0112638|FBtr0306335|FBtr0306333|FBtr0332409|FBtr0112639|FBtr0112641 3358638|3358638|3358638|3358638|3358638|3358638 3360717|3360717|3360717|3360717|3360717|3360717 GTATCCCA 8mer-A1 dme-miR-317-5p 2L - 3360239 3360291 3'utr CG34394 FlyBase G5692.1 GAATGTTAAGGTTAATGTTGAAAATTCATGTATCCCAATCAAGGTTTAACCTA 10 3360246 0.977205411 3 9 61 1 1.146128036 0.142857143 0.3 0.5 10 0 0 14 2L:3360239-3360291 8 7 690 FBgn0085423 1284.263333 25.49333333 39.12 0.005450596 0.27458159 0.178936605 -16 -16 -16 0.01 dme-bantam-3p 7mer-m8 TGATCTC 2L 3360367 3360373 - 2L_3360367_3360373_- 0.661615243 0.661615243 0.661615243 0 CG34394 FBtr0332409|FBtr0306333|FBtr0306335|FBtr0112638|FBtr0112641|FBtr0112639 3358638|3358638|3358638|3358638|3358638|3358638 3360717|3360717|3360717|3360717|3360717|3360717 2L - 3360306 3360421 3'utr CG34394 FlyBase G7282.1 AGGTCTGATAGTTTTGAAACGCACTGCACCAGCGGGCATTTGTTACTTTGATCTCCTAGTTAGCAATACACAAAACCCAAACTTGTGCATGTTCTATTCTCTCGGATTAAGATACA 496 3360374 0.807763879 18 476 5025 0.961148649 2.056142262 0.336148649 0.157258065 0.293918919 496 19 4 569 2L:3360306-3360421 7 CG34394 FBtr0112638|FBtr0306335|FBtr0306333|FBtr0332409|FBtr0112639|FBtr0112641 3358638|3358638|3358638|3358638|3358638|3358638 3360717|3360717|3360717|3360717|3360717|3360717 TGATCTC 7mer-m8 dme-bantam-3p 2L - 3360345 3360423 3'utr CG34394 FlyBase G5693.1 AAAGGTCTGATAGTTTTGAAACGCACTGCACCAGCGGGCATTTGTTACTTTGATCTCCTAGTTAGCAATACACAAAACC 266 3360374 0.720383739 16 249 2609 0.938931298 1.721928326 0.361323155 0.342105263 0.554707379 266 18 6 369 2L:3360345-3360423 7 367 691 FBgn0085423 1284.263333 25.49333333 39.12 0.285766938 14.3959205 9.381390593 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2L 3375997 3376002 - 2L_3375997_3376002_- 1 1 1 0 CG9662 FBtr0332407|FBtr0077594 3375830|3375881 3376109|3376109 2L - 3375968 3376043 3'utr CG9662 FlyBase G7293.1 TCGCCAGAAATTCTAGTTTAAAAGGCTTAAAGCTGCGGAATACCAAACAAAAACTTTGATTTCGTTTTAAAATTTT 16 3376003 0.997557214 3 15 62 1 1.278753601 0.105263158 0.125 0.263157895 16 0 0 19 2L:3375968-3376043 6 CG9662 FBtr0332407|FBtr0077594 3375830|3375881 3376109|3376109 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 3375975 3376054 3'utr CG9662 FlyBase G5701.1 CCGAACTGCATTCGCCAGAAATTCTAGTTTAAAAGGCTTAAAGCTGCGGAATACCAAACAAAAACTTTGATTTCGTTTTA 12 3376003 0.961843316 4 12 53 1 1.204119983 0.1875 0.333333333 0.5 12 0 0 16 2L:3375975-3376054 6 9.5 692 FBgn0031529 163.3333333 24.98 37.89333333 0.058163265 0.380304243 0.25070373 1 1 1 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 3405151 3405157 - 2L_3405151_3405157_- 0.658999527 0.658999527 0.658999527 0 pgant2 FBtr0077592|FBtr0303992 3404458|3404458 3405576|3405576 2L - 3405145 3405180 3'utr pgant2 FlyBase G7299.1 ACTGTAACCCTAATGCAACCTTTGGCAGCTGATTAA 63 3405158 0.75787803 3 62 395 0.975308642 1.897627091 0.086419753 0.19047619 0.37037037 63 2 0 79 2L:3405145-3405180 7 pgant2 FBtr0077592|FBtr0303992 3404458|3404458 3405576|3405576 GGCAGCT 7mer-m8 dme-miR-980-3p 2L - 3405145 3405181 3'utr pgant2 FlyBase G5706.1 TACTGTAACCCTAATGCAACCTTTGGCAGCTGATTAA 60 3405158 0.740495215 5 59 373 0.978021978 1.949390007 0.131868132 0.366666667 0.582417582 60 2 0 89 2L:3405145-3405181 7 61.5 693 FBgn0031530 60.33333333 2.156666667 3.27 1.019337017 28.51622875 18.80733945 1 1 1 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 2L 3405235 3405241 - 2L_3405235_3405241_- 0.823349518 0.823349562 0.82334954 7.07E-08 pgant2 FBtr0077592|FBtr0303992 3404458|3404458 3405576|3405576 2L - 3405214 3405267 3'utr pgant2 FlyBase G7300.1 ATAAAGGGCATACAAAAAACGTACTTAGACTGATTAATTTTTTGTATATGTATA 57 3405243 0.833765255 4 55 503 0.971830986 1.537819095 0.014084507 0.228070175 0.38028169 57 1 1 69 2L:3405214-3405267 7 pgant2 FBtr0077592|FBtr0303992 3404458|3404458 3405576|3405576 AGACTGA 7mer-A1 dme-miR-14-3p 2L - 3405221 3405267 3'utr pgant2 FlyBase G5707.1 ATAAAGGGCATACAAAAAACGTACTTAGACTGATTAATTTTTTGTAT 44 3405243 0.985200751 3 42 347 0.9 1.799340549 0.071428571 0.363636364 0.6 44 7 0 63 2L:3405221-3405267 7 50 694 FBgn0031530 60.33333333 2.156666667 3.27 0.828729282 23.18392581 15.29051988 2 2 2 0.01 dme-miR-277-3p 6mer2-7 GCATTT 2L 3451763 3451768 + 2L_3451763_3451768_+ 0.999971407 1 0.999985703 2.02E-05 Snx1 FBtr0343238|FBtr0077517 3451566|3451566 3452106|3452106 2L + 3451727 3451953 3'utr Snx1 FlyBase G1550.1 CGTATTTTTTGGGAAACTGCTTCCGATTCCTCTCAAGCATTTCGCGATGCATTCACAATGCCTCTATCTCTTTATTCGTACACAGTAATTATTATCAGAAAGCTGAAAGTTTGCTACAGACCCAGGGATCTGCGTATTCTCATTCAAAAATTGTATTCGGTATTATCTAAAACAAAGCCATGGATCTAGTTAGTTAGTTGAAAGTGAAGAAGACTCATTGGCAATTT 84 3451767 0.977545644 26 78 684 0.928571429 1.481920138 0.071428571 0.130952381 0.255102041 84 5 2 91 2L:3451727-3451953 6 Snx1 FBtr0343238|FBtr0077517 3451566|3451566 3452106|3452106 GCATTT 6mer2-7 dme-miR-277-3p 2L + 3451744 3451822 3'utr Snx1 FlyBase G1224.1 TGCTTCCGATTCCTCTCAAGCATTTCGCGATGCATTCACAATGCCTCTATCTCTTTATTCGTACACAGTAATTATTATC 34 3451767 0.985779371 11 33 276 0.960784314 1.69019608 0 0.323529412 0.549019608 34 2 0 49 2L:3451744-3451822 6 26.5 695 FBgn0031534 591 35.52666667 54.49666667 0.044839255 0.745918559 0.486268273 -4 -4 -4 0.01 dme-miR-965-3p 7mer-m8 TACGCTT 2L 3453778 3453784 - 2L_3453778_3453784_- 0.620204855 0.620204855 0.620204855 0 Cog3 FBtr0077573 3453695 3453922 2L - 3453757 3453799 3'utr Cog3 FlyBase G7302.1 GTGTTAAAAACTATCTACGCTTTCCAAATGTAGACTTAACATT 14 3453784 0.751685691 4 12 103 0.875 0.84509804 0.375 0.142857143 0.25 14 1 1 14 2L:3453757-3453799 7 Cog3 FBtr0077573 3453695 3453922 TACGCTT 7mer-m8 dme-miR-965-3p 2L - 3453748 3453806 3'utr Cog3 FlyBase G5709.1 AAGATCCGTGTTAAAAACTATCTACGCTTTCCAAATGTAGACTTAACATTAATTTATTT 13 3453784 0.745647707 7 10 101 0.842105263 1.204119983 0.315789474 0.384615385 0.578947368 13 3 0 16 2L:3453748-3453806 7 11 696 FBgn0031536 124 5.03 7.693333333 0.088709677 2.186878728 1.429809359 0 0 0 0.01 dme-miR-8-3p 7mer-m8 CAGTATT 2L 345528 345534 + 2L_345528_345534_+ 0.661615243 0.661615243 0.661615243 0 Plc21C FBtr0078049|FBtr0078050|FBtr0330674|FBtr0078047|FBtr0330673|FBtr0078048 345447|345447|345447|345447|345447|345447 355566|347927|346255|346255|346255|346541 2L + 345515 345564 3'utr Plc21C FlyBase G717.1 AGTTGTTAGTCTTCAGTATTTACAGCAGAAACATAGGAATGAAAAGTCTT 12 345527 0.994932734 5 11 76 0.933333333 1.146128036 0.2 0.25 0.4 12 1 0 14 2L:345515-345564 7 Plc21C FBtr0330673|FBtr0078048|FBtr0330674|FBtr0078047|FBtr0078049|FBtr0078050 345447|345447|345447|345447|345447|345447 346255|346541|346255|346255|355566|347927 CAGTATT 7mer-m8 dme-miR-8-3p 2L + 345491 345555 3'utr Plc21C FlyBase G579.1 CCCTAGGATTAATTGTGGTTCTAAAGTTGTTAGTCTTCAGTATTTACAGCAGAAACATAGGAATG 9 345526 0.989069386 6 8 50 0.923076923 1.079181246 0.461538462 0.222222222 0.461538462 9 1 0 12 2L:345491-345555 7 7.5 697 FBgn0004611 260.3233333 5.52 8.483333333 0.028810326 1.358695652 0.884086444 1 2 1.5 0.01 dme-miR-13b-2-5p 7mer-m8 TTTGACG 2L 345612 345618 + 2L_345612_345618_+ 0.658962966 0.659000274 0.65898162 2.64E-05 Plc21C FBtr0078049|FBtr0078050|FBtr0330674|FBtr0078047|FBtr0330673|FBtr0078048 345447|345447|345447|345447|345447|345447 355566|347927|346255|346255|346255|346541 2L + 345608 345648 3'utr Plc21C FlyBase G718.1 CCTATTTGACGGGAACTGACCTCGATTAGATCTTAGGACCT 5 345630 0.96882523 5 5 28 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2L:345608-345648 7 Plc21C FBtr0330673|FBtr0078048|FBtr0330674|FBtr0078047|FBtr0078049|FBtr0078050 345447|345447|345447|345447|345447|345447 346255|346541|346255|346255|355566|347927 TTTGACG 7mer-m8 dme-miR-13b-2-5p 2L + 345610 345646 3'utr Plc21C FlyBase G580.1 TATTTGACGGGAACTGACCTCGATTAGATCTTAGGAC 5 345633 0.972097879 2 4 29 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 2L:345610-345646 7 3 698 FBgn0004611 260.3233333 5.52 8.483333333 0.01152413 0.543478261 0.353634578 -18 -21 -19.5 0.01 dme-miR-307a-3p 7mer-m8 GGTTGTG 2L 346001 346007 + 2L_346001_346007_+ 0.702972035 0.702972035 0.702972035 0 Plc21C FBtr0078049|FBtr0078050|FBtr0330674|FBtr0078047|FBtr0330673|FBtr0078048 345447|345447|345447|345447|345447|345447 355566|347927|346255|346255|346255|346541 2L + 345963 346020 3'utr Plc21C FlyBase G719.1 AAGGAGACTGAGTGCTCCATTTGTCTAATGCTAATTGTGGTTGTGTGTATTTTACATC 26 345999 0.991496352 7 26 279 1 1.505149978 0.09375 0.192307692 0.34375 26 0 0 32 2L:345963-346020 7 Plc21C FBtr0330673|FBtr0078048|FBtr0330674|FBtr0078047|FBtr0078049|FBtr0078050 345447|345447|345447|345447|345447|345447 346255|346541|346255|346255|355566|347927 GGTTGTG 7mer-m8 dme-miR-307a-3p 2L + 345983 346022 3'utr Plc21C FlyBase G581.1 TTGTCTAATGCTAATTGTGGTTGTGTGTATTTTACATCAG 16 346001 0.701867721 5 15 177 0.964285714 1.431363764 0.321428571 0.5 0.714285714 16 1 0 27 2L:345983-346022 7 20.5 699 FBgn0004611 260.3233333 5.52 8.483333333 0.078748223 3.713768116 2.416502947 2 0 1 0.01 dme-miR-988-3p 6mer3-8 ACAAGG 2L 346094 346099 + 2L_346094_346099_+ 1 0.999785898 0.999892949 0.000151392 Plc21C FBtr0078049|FBtr0078050|FBtr0330674|FBtr0078047|FBtr0330673|FBtr0078048 345447|345447|345447|345447|345447|345447 355566|347927|346255|346255|346255|346541 2L + 346043 346108 3'utr Plc21C FlyBase G720.1 ACAATTAGTTTAAGCCTCTCACACAAACTGTGGATTGAATCTCGTGCGCACACAAGGCGGATGCTA 44 346078 0.973135495 6 43 262 0.978723404 1.361727836 0.276595745 0.068181818 0.127659574 44 0 1 46 2L:346043-346108 6 Plc21C FBtr0330673|FBtr0078048|FBtr0330674|FBtr0078047|FBtr0078049|FBtr0078050 345447|345447|345447|345447|345447|345447 346255|346541|346255|346255|355566|347927 ACAAGG 6mer3-8 dme-miR-988-3p 2L + 346031 346117 3'utr Plc21C FlyBase G582.1 GATATAATTTATACAATTAGTTTAAGCCTCTCACACAAACTGTGGATTGAATCTCGTGCGCACACAAGGCGGATGCTAGAGCGGATG 40 346078 0.978550247 7 36 240 0.90625 1.763427994 0.375 0.575 0.734375 40 6 0 58 2L:346031-346117 6 14 700 FBgn0004611 260.3233333 5.52 8.483333333 0.053779274 2.536231884 1.650294695 16 16 16 0.01 dme-miR-1006-3p 6mer2-7 GAATTT 2L 3462339 3462344 - 2L_3462339_3462344_- 1 1 1 0 msl-2 FBtr0077571|FBtr0077570 3462216|3462216 3463265|3463265 2L - 3462260 3462372 3'utr msl-2 FlyBase G7308.1 TGAATAGGCTAAGACTTTTTTTGAGCATGAATTTTTTTGAGCACGTGAACCTAGGATTAAGAACAACAATTCAAGTAAGCCATATATACCCATATTATATATGCGAACATATA 16 3462353 0.988682103 11 13 120 0.863636364 1.278753601 0.090909091 0.25 0.454545455 16 3 0 19 2L:3462260-3462372 6 msl-2 FBtr0077570|FBtr0077571 3462216|3462216 3463265|3463265 GAATTT 6mer2-7 dme-miR-1006-3p 2L - 3462251 3462384 3'utr msl-2 FlyBase G5713.1 AAGACATTTTTTTGAATAGGCTAAGACTTTTTTTGAGCATGAATTTTTTTGAGCACGTGAACCTAGGATTAAGAACAACAATTCAAGTAAGCCATATATACCCATATTATATATGCGAACATATAACTATTAAA 29 3462352 0.985707609 16 28 224 0.923076923 1.556302501 0.256410256 0.275862069 0.461538462 29 3 0 36 2L:3462251-3462384 6 11 701 FBgn0005616 482.6633333 15.65666667 24.13 0.022790213 0.702576112 0.45586407 9 8 8.5 0.01 dme-miR-970-3p 6mer3-8 TCTTAT 2L 3463113 3463118 - 2L_3463113_3463118_- 1 1 1 0 msl-2 FBtr0077571|FBtr0077570 3462216|3462216 3463265|3463265 2L - 3463090 3463151 3'utr msl-2 FlyBase G7313.1 ATTGCATCCATAACGTGGTATCGTCTTTGATCCTCTTATCATACCCGTTATTCGTAGAGTAA 141 3463124 0.750628951 15 118 1573 0.825301205 1.437750563 0.228915663 0.163120567 0.289156627 141 25 4 137 2L:3463090-3463151 6 msl-2 FBtr0077570|FBtr0077571 3462216|3462216 3463265|3463265 TCTTAT 6mer3-8 dme-miR-970-3p 2L - 3463089 3463149 3'utr msl-2 FlyBase G5717.1 TGCATCCATAACGTGGTATCGTCTTTGATCCTCTTATCATACCCGTTATTCGTAGAGTAAA 105 3463124 0.757283674 12 82 1058 0.781456954 2.071882007 0.145695364 0.342857143 0.543046358 105 33 0 118 2L:3463089-3463149 6 121.5 702 FBgn0005616 482.6633333 15.65666667 24.13 0.251728258 7.760272514 5.03522586 6 6 6 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 2L 3463226 3463231 - 2L_3463226_3463231_- 1 1 1 0 msl-2 FBtr0077571|FBtr0077570 3462216|3462216 3463265|3463265 2L - 3463200 3463234 3'utr msl-2 FlyBase G7314.1 TTTATGTGCTCAGTGATGTCCAGGTATCAATCCTT 8 3463220 0.834318038 4 8 55 1 1.079181246 0.5 0.375 0.583333333 8 0 0 12 2L:3463200-3463234 6 msl-2 FBtr0077570|FBtr0077571 3462216|3462216 3463265|3463265 ATGTGC 6mer3-8 dme-miR-305-3p 2L - 3463204 3463231 3'utr msl-2 FlyBase G5718.1 ATGTGCTCAGTGATGTCCAGGTATCAAT 6 3463221 0.731764143 2 5 34 1 1 0.3 0.666666667 0.8 6 0 0 10 2L:3463204-3463231 6 7 703 FBgn0005616 482.6633333 15.65666667 24.13 0.014502863 0.44709389 0.290095317 -11 -10 -10.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 3621106 3621111 + 2L_3621106_3621111_+ 1 1 1 0 Dot FBtr0339571|FBtr0339571|FBtr0339571|FBtr0077532|FBtr0077532|FBtr0077532 3621072|3621072|3621072|3621072|3621072|3621072 3621573|3621573|3621573|3621171|3621171|3621171 2L + 3621087 3621126 3'utr Dot FlyBase G1591.1 ACGCATGACTTGACAATTTCTGTGACAACAAATATATATA 17 3621104 0.636724767 6 16 116 0.947368421 1.255272505 0 0.117647059 0.210526316 17 1 0 18 2L:3621087-3621126 6 Dot FBtr0339571|FBtr0339571|FBtr0339571|FBtr0077532|FBtr0077532|FBtr0077532 3621072|3621072|3621072|3621072|3621072|3621072 3621573|3621573|3621573|3621171|3621171|3621171 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 3621080 3621128 3'utr Dot FlyBase G1254.1 AAGATTTACGCATGACTTGACAATTTCTGTGACAACAAATATATATATT 12 3621104 0.95693276 5 12 93 1 1.230448921 0 0.333333333 0.529411765 12 0 0 17 2L:3621080-3621128 6 13.5 704 FBgn0015663 146.7833333 8.573333333 13.06 0.091972295 1.574650078 1.033690658 2 2 2 0.01 dme-miR-932-5p 8mer-A1 GGAATTGA 2L 3622414 3622421 - 2L_3622414_3622421_- 0.674982804 0.674982804 0.674982804 0 for FBtr0089307|FBtr0089304|FBtr0089310|FBtr0089312|FBtr0089306|FBtr0089308|FBtr0089309|FBtr0100363 3622072|3622072|3622072|3622072|3622072|3622072|3622072|3622072 3622777|3622777|3622777|3622777|3622777|3622777|3622777|3622777 2L - 3622326 3622437 3'utr for FlyBase G7353.1 TGTGTCTAGTTCGCTTGGAATTGATGTAAATTGTAAGTAGGTCTGTGACTCTGTTTCAGAGCTCTGTTAGCCATGTGCATTGTATAAATTCAGCTATTTGTATCTATTAAAT 19 3622422 0.990417228 8 17 176 0.92 1.361727836 0.24 0.210526316 0.4 19 2 0 23 2L:3622326-3622437 8 for FBtr0100363|FBtr0089306|FBtr0089308|FBtr0089309|FBtr0089310|FBtr0089312|FBtr0089307|FBtr0089304 3622072|3622072|3622072|3622072|3622072|3622072|3622072|3622072 3622777|3622777|3622777|3622777|3622777|3622777|3622777|3622777 GGAATTGA 8mer-A1 dme-miR-932-5p 2L - 3622394 3622443 3'utr for FlyBase G5751.1 GATATATGTGTCTAGTTCGCTTGGAATTGATGTAAATTGTAAGTAGGTCT 7 3622422 0.992924074 3 5 69 0.888888889 0.903089987 0.222222222 0.142857143 0.333333333 7 1 0 8 2L:3622394-3622443 8 10 705 FBgn0000721 694.3333333 18.66333333 28.79666667 0.014402304 0.535809966 0.347262415 1 1 1 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 3622683 3622688 - 2L_3622683_3622688_- 1 1 1 0 for FBtr0089307|FBtr0089304|FBtr0089310|FBtr0089312|FBtr0089306|FBtr0089308|FBtr0089309|FBtr0100363|FBtr0301399 3622072|3622072|3622072|3622072|3622072|3622072|3622072|3622072|3622615 3622777|3622777|3622777|3622777|3622777|3622777|3622777|3622777|3622777 2L - 3622657 3622710 5'utr for FlyBase G7355.1 ATGAAAGCCAGGGAAGAAAAATTGATCTTAAGTGCGCCATATGTACGCCAAAGC 111 3622689 0.961736445 4 110 552 0.992 1.792391689 0.24 0.108108108 0.208 111 0 1 124 2L:3622657-3622710 6 for FBtr0100363|FBtr0301399|FBtr0089306|FBtr0089308|FBtr0089309|FBtr0089310|FBtr0089312|FBtr0089307|FBtr0089304 3622072|3622615|3622072|3622072|3622072|3622072|3622072|3622072|3622072 3622777|3622777|3622777|3622777|3622777|3622777|3622777|3622777|3622777 TGATCT 6mer3-8 dme-bantam-3p 2L - 3622654 3622706 5'utr for FlyBase G5752.1 AAGCCAGGGAAGAAAAATTGATCTTAAGTGCGCCATATGTACGCCAAAGCCAA 83 3622689 0.960144891 4 79 388 0.966101695 1.45484486 0.288135593 0.337349398 0.533898305 83 1 3 114 2L:3622654-3622706 6 96 706 FBgn0000721 694.3333333 18.66333333 28.79666667 0.138262122 5.143775674 3.33371918 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2L 3716579 3716584 + 2L_3716579_3716584_+ 1 1 1 0 CG2818 FBtr0077537|FBtr0077538 3716507|3716507 3716810|3716810 2L + 3716512 3716596 3'utr CG2818 FlyBase G1599.1 TTGAATATCGGAACTGCTCGACTATTTTATACTCATCTTTATGTACGAAAATAACCGCCCGGCTTGGACCAAAACTCATCAGATT 15 3716576 0.934484325 7 14 61 0.941176471 1.204119983 0.117647059 0.133333333 0.235294118 15 1 0 16 2L:3716512-3716596 6 CG2818 FBtr0077537|FBtr0077538 3716507|3716507 3716810|3716810 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L + 3716556 3716594 3'utr CG2818 FlyBase G1258.1 ACGAAAATAACCGCCCGGCTTGGACCAAAACTCATCAGA 10 3716576 0.590312994 5 9 25 0.933333333 1.146128036 0.066666667 0.4 0.6 10 1 0 14 2L:3716556-3716594 6 10 707 FBgn0031566 211.58 9.483333333 14.51333333 0.047263446 1.054481547 0.689021589 3 3 3 0.01 dme-miR-305-5p 8mer-m1 AGTACAAT 2L 3783588 3783595 + 2L_3783588_3783595_+ 0.570363044 0.570363044 0.570363044 0 bowl FBtr0307029|FBtr0077490|FBtr0307027|FBtr0077492|FBtr0077491|FBtr0077493|FBtr0307028 3783283|3783283|3783283|3783283|3783283|3783283|3783283 3784121|3784121|3784121|3784121|3784121|3784121|3784121 2L + 3783564 3783645 3'utr bowl FlyBase G1619.1 TAGATCTACAATTTAATACTTTTTAGTACAATGTCTAGGCAAGGCAATAGACCTAAACTAAGTAATAAAATCAGTTAAGCGA 121 3783586 0.989399388 13 111 1090 0.935714286 1.8162413 0.192857143 0.123966942 0.242857143 121 8 1 131 2L:3783564-3783645 8 bowl FBtr0077491|FBtr0077493|FBtr0307028|FBtr0307029|FBtr0077490|FBtr0307027|FBtr0077492 3783283|3783283|3783283|3783283|3783283|3783283|3783283 3784121|3784121|3784121|3784121|3784121|3784121|3784121 AGTACAAT 8mer-m1 dme-miR-305-5p 2L + 3783538 3783704 3'utr bowl FlyBase G1283.1 GACCCACAAGTACATTAAAATAAATTTAGATCTACAATTTAATACTTTTTAGTACAATGTCTAGGCAAGGCAATAGACCTAAACTAAGTAATAAAATCAGTTAAGCGATAATTGTAAGCGAAACAAACTCCGTTGTTGCATTTTATAGAGCTCTTATGCGTTAGGAT 171 3783586 0.834758409 17 161 1556 0.937743191 1.603865792 0.155642023 0.385964912 0.591439689 171 11 5 241 2L:3783538-3783704 8 92.5 708 FBgn0004893 346.31 11.79 17.92333333 0.26710173 7.845631891 5.160870374 2 2 2 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 2L 3783674 3783680 + 2L_3783674_3783680_+ 0.620204266 0.620204266 0.620204266 0 bowl FBtr0307029|FBtr0077490|FBtr0307027|FBtr0077492|FBtr0077491|FBtr0077493|FBtr0307028 3783283|3783283|3783283|3783283|3783283|3783283|3783283 3784121|3784121|3784121|3784121|3784121|3784121|3784121 2L + 3783646 3783859 3'utr bowl FlyBase G1619.2 TAATTGTAAGCGAAACAAACTCCGTTGTTGCATTTTATAGAGCTCTTATGCGTTAGGATTTTAGCTTAAATCTACCGATTTAAATGTTTAAGCCTTTAGTACGAGAGTCTATCGATTAGTTTTTAATGTGTGGCCCAACACTAAGTGTTGCTGTTTGCTGAGTGAATTCCAATTTTTTATTTATGTTTCCTTATCCGGTAAGCTAATCTTAATG 182 3783673 0.98939516 33 169 1736 0.925925926 1.698970004 0.162037037 0.159340659 0.291666667 182 13 3 200 2L:3783646-3783859 7 bowl FBtr0077491|FBtr0077493|FBtr0307028|FBtr0307029|FBtr0077490|FBtr0307027|FBtr0077492 3783283|3783283|3783283|3783283|3783283|3783283|3783283 3784121|3784121|3784121|3784121|3784121|3784121|3784121 TGCATTT 7mer-m8 dme-miR-277-3p 2L + 3783538 3783704 3'utr bowl FlyBase G1283.1 GACCCACAAGTACATTAAAATAAATTTAGATCTACAATTTAATACTTTTTAGTACAATGTCTAGGCAAGGCAATAGACCTAAACTAAGTAATAAAATCAGTTAAGCGATAATTGTAAGCGAAACAAACTCCGTTGTTGCATTTTATAGAGCTCTTATGCGTTAGGAT 171 3783673 0.834758409 17 161 1556 0.937743191 1.603865792 0.155642023 0.385964912 0.591439689 171 11 5 241 2L:3783538-3783704 7 102.5 709 FBgn0004893 346.31 11.79 17.92333333 0.295977592 8.693808312 5.718802306 1 1 1 0.01 dme-miR-7-5p 7mer-m8 GTCTTCC 2L 3784044 3784050 + 2L_3784044_3784050_+ 0.705950313 0.705950313 0.705950313 0 bowl FBtr0307029|FBtr0077490|FBtr0307027|FBtr0077492|FBtr0077491|FBtr0077493|FBtr0307028 3783283|3783283|3783283|3783283|3783283|3783283|3783283 3784121|3784121|3784121|3784121|3784121|3784121|3784121 2L + 3784018 3784101 3'utr bowl FlyBase G1620.1 ATATAAGCAACCCATAGAATTCCATGGTCTTCCTTCAATTTTAAATGATTTTATTCAAACCATAGCGAGTTAGTTGATTTCAAA 138 3784042 0.773076778 12 130 1064 0.947368421 1.364416975 0 0.195652174 0.350877193 138 3 6 162 2L:3784018-3784101 7 bowl FBtr0077491|FBtr0077493|FBtr0307028|FBtr0307029|FBtr0077490|FBtr0307027|FBtr0077492 3783283|3783283|3783283|3783283|3783283|3783283|3783283 3784121|3784121|3784121|3784121|3784121|3784121|3784121 GTCTTCC 7mer-m8 dme-miR-7-5p 2L + 3784016 3784103 3'utr bowl FlyBase G1286.1 TAATATAAGCAACCCATAGAATTCCATGGTCTTCCTTCAATTTTAAATGATTTTATTCAAACCATAGCGAGTTAGTTGATTTCAAATA 119 3784042 0.783192276 12 118 966 0.994444444 2.252853031 0.016666667 0.411764706 0.611111111 119 1 0 179 2L:3784016-3784103 7 119.5 710 FBgn0004893 346.31 11.79 17.92333333 0.345066559 10.13570823 6.667286591 2 2 2 0.01 dme-miR-283-5p 7mer-A1 GATATTA 2L 408978 408984 - 2L_408978_408984_- 0.489877847 0.782911824 0.636394835 0.207206329 AP-2alpha FBtr0089489|FBtr0089488 408874|408028 409387|409387 2L - 408959 409019 3'utr AP-2alpha FlyBase G6532.1 TATATTGTTGCATCATTTCGAGGCAGTAGCAATTGGATATTATATACCTATATACAGATCT 25 408987 0.832907339 7 21 188 0.892857143 1.397940009 0.214285714 0.12 0.214285714 25 3 0 25 2L:408959-409019 7 AP-2alpha FBtr0089488|FBtr0089489 408028|408874 409387|409387 GATATTA 7mer-A1 dme-miR-283-5p 2L - 408961 408999 3'utr AP-2alpha FlyBase G5105.1 AGGCAGTAGCAATTGGATATTATATACCTATATACAGAT 5 408979 0.996005565 2 2 31 0.461538462 0.77815125 0 0.8 0.923076923 5 7 0 6 2L:408961-408999 7 8.5 711 FBgn0264855 2009.92 51.58333333 79.16333333 0.004229024 0.164781906 0.107372942 3 -5 -1 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 409213 409218 - 2L_409213_409218_- 1 1 1 0 AP-2alpha FBtr0089489|FBtr0089488 408874|408028 409387|409387 2L - 409103 409232 3'utr AP-2alpha FlyBase G6533.1 TACACTCTTCTTAAGTACCTTTCATCTTCTCCAACAGCGAGTTGATTTACCCACTGTCCTGTTTATTTGAATATTATGTTTGTAAACCTACTCTTACTTTAACCATTTTCAATTTCATGTTCCCAAACTT 37 409211 0.974841541 14 33 346 0.933333333 1.62324929 0.022222222 0.162162162 0.311111111 37 3 0 42 2L:409103-409232 6 AP-2alpha FBtr0089488|FBtr0089489 408028|408874 409387|409387 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L - 409168 409274 3'utr AP-2alpha FlyBase G5106.2 GGCCCTAGAACTGTACGCGTTTAGTTATGCCAGGCACACTCCTACACTCTTCTTAAGTACCTTTCATCTTCTCCAACAGCGAGTTGATTTACCCACTGTCCTGTTTA 12 409211 0.988852438 6 9 94 0.933333333 1.146128036 0.066666667 0.25 0.4 12 1 0 14 2L:409168-409274 6 11.5 712 FBgn0264855 2009.92 51.58333333 79.16333333 0.005721621 0.222940226 0.145269274 -7 -7 -7 0.01 dme-miR-965-3p 7mer-A1 ACGCTTA 2L 417675 417681 + 2L_417675_417681_+ 0.823349562 0.823349562 0.823349562 0 ebi FBtr0078055 417633 418536 2L + 417619 417703 stop_codon ebi FlyBase G751.1 CCTGCGAAAGTTCTGATTGCCGGAGCAGCCACAACTGGATTTCGTGTATTGAGCCAACGCTTAAAATAGTCAAGATTCCTTTTCC 15 417667 0.970188174 7 15 85 1 1.322219295 0.142857143 0.266666667 0.476190476 15 0 0 21 2L:417619-417703 7 ebi FBtr0078055 417633 418536 ACGCTTA 7mer-A1 dme-miR-965-3p 2L + 417645 417683 3'utr ebi FlyBase G602.1 AGCCACAACTGGATTTCGTGTATTGAGCCAACGCTTAAA 11 417667 0.757518519 4 11 73 1 1.204119983 0 0.363636364 0.5625 11 0 0 16 2L:417645-417683 7 8.5 713 FBgn0263933 724.51 26.33666667 40.32333333 0.011732067 0.322743956 0.210796065 8 8 8 0.01 dme-miR-277-3p 8mer-A1 TGCATTTA 2L 417785 417792 + 2L_417785_417792_+ 0.625364269 0.625364269 0.625364269 0 ebi FBtr0078055 417633 418536 2L + 417764 417810 3'utr ebi FlyBase G752.1 TTTTACTTTTGATTCAAAAATTGCATTTAACTATATTTTTTAAAGAA 78 417784 0.876237012 2 76 713 0.989130435 1.658011397 0 0.153846154 0.282608696 78 0 1 91 2L:417764-417810 8 ebi FBtr0078055 417633 418536 TGCATTTA 8mer-A1 dme-miR-277-3p 2L + 417765 417813 3'utr ebi FlyBase G603.1 TTTACTTTTGATTCAAAAATTGCATTTAACTATATTTTTTAAAGAAGTG 50 417784 0.867074054 3 49 428 0.97260274 1.851258349 0.02739726 0.44 0.616438356 50 2 0 71 2L:417765-417813 8 63 714 FBgn0263933 724.51 26.33666667 40.32333333 0.086955322 2.392102266 1.562370836 1 1 1 0.01 dme-miR-317-5p 6mer2-7 TATCCC 2L 417893 417898 + 2L_417893_417898_+ 0.999996771 0.999999995 0.999998383 2.26E-06 ebi FBtr0078055 417633 418536 2L + 417845 418008 3'utr ebi FlyBase G753.1 AGTCGATTTGGATCTGGAGTCCGGACCTTAGGTAACTCCTTTCTTAGCTATCCCGCCCTGCAATCGTATTTGTAATTGCTTTAAATTCTAATTAGTTCTTTAAGGTATACCTCTTGAGATGAGATCCTCCCGCTTTTGTCCACGTCTATTTCGTACGCTTAGTT 76 417895 0.823181114 19 74 560 0.977272727 1.934498451 0.068181818 0.131578947 0.25 76 2 0 86 2L:417845-418008 6 ebi FBtr0078055 417633 418536 TATCCC 6mer2-7 dme-miR-317-5p 2L + 417841 417912 3'utr ebi FlyBase G604.1 CATAAGTCGATTTGGATCTGGAGTCCGGACCTTAGGTAACTCCTTTCTTAGCTATCCCGCCCTGCAATCGTA 35 417895 0.773981067 12 34 234 1 1.681241237 0.145833333 0.371428571 0.541666667 35 0 0 48 2L:417841-417912 6 39 715 FBgn0263933 724.51 26.33666667 40.32333333 0.053829485 1.480825212 0.967181946 -2 -2 -2 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 2L 418174 418180 + 2L_418174_418180_+ 0.620204266 0.620204266 0.620204266 0 ebi FBtr0078055 417633 418536 2L + 418153 418230 3'utr ebi FlyBase G755.1 GAAAATCGTTTAGTATAACTTTGCATTTTGTTATTGTATCGATCAAAGATGCCAGCCAACTCCCCGCCCTCCCCACCA 33 418202 0.968361584 4 29 182 0.923076923 1.255272505 0.025641026 0.151515152 0.282051282 33 2 1 36 2L:418153-418230 7 ebi FBtr0078055 417633 418536 TGCATTT 7mer-m8 dme-miR-277-3p 2L + 418164 418227 3'utr ebi FlyBase G608.1 AGTATAACTTTGCATTTTGTTATTGTATCGATCAAAGATGCCAGCCAACTCCCCGCCCTCCCCA 11 418202 0.994714044 2 11 67 1 1.176091259 0 0.363636364 0.533333333 11 0 0 15 2L:418164-418227 7 8 716 FBgn0263933 724.51 26.33666667 40.32333333 0.011041946 0.303759018 0.198396297 -28 -28 -28 0.01 dme-miR-184-3p 7mer-m8 TCCGTCC 2L 4345023 4345029 + 2L_4345023_4345029_+ 0.661615243 0.661615243 0.661615243 0 Atet FBtr0112898|FBtr0077426|FBtr0112899|FBtr0077427 4344479|4344479|4344479|4344479 4345776|4345411|4345776|4345411 2L + 4344933 4345042 3'utr Atet FlyBase G1643.1 AAAACATAACAAATTGTAGACAAGATCCTTTAGAACGGAAACCGAATCGGTGCAGAGTTTAGGACACGACTTTCTCCCAACGTTCTTCACTCCGTCCCTAAGTTGTACTC 35 4345006 0.801708613 12 34 211 0.976744186 1.62324929 0.186046512 0.171428571 0.325581395 35 1 0 42 2L:4344933-4345042 7 Atet FBtr0112898|FBtr0077426|FBtr0112899|FBtr0077427 4344479|4344479|4344479|4344479 4345776|4345411|4345776|4345411 TCCGTCC 7mer-m8 dme-miR-184-3p 2L + 4344892 4345032 3'utr Atet FlyBase G1302.1 CTTGTGACCATGCAGAAAAGAGTCTGAACTTAAGTAGGTTGAAAACATAACAAATTGTAGACAAGATCCTTTAGAACGGAAACCGAATCGGTGCAGAGTTTAGGACACGACTTTCTCCCAACGTTCTTCACTCCGTCCCTA 22 4345006 0.974252763 10 19 121 0.896551724 1.414973348 0.103448276 0.272727273 0.448275862 22 3 0 26 2L:4344892-4345032 7 6.5 717 FBgn0020762 413.91 11.67333333 17.79666667 0.015703897 0.556824672 0.365236936 17 17 17 0.01 dme-miR-283-5p 6mer3-8 TGATAT 2L 4345260 4345265 + 2L_4345260_4345265_+ 1 1 1 0 Atet FBtr0112898|FBtr0077426|FBtr0112899|FBtr0077427 4344479|4344479|4344479|4344479 4345776|4345411|4345776|4345411 2L + 4345233 4345272 3'utr Atet FlyBase G1645.1 ATCGGAGAAGGGAACCTGGCCAACTGGTGATATAAAGCAA 35 4345257 0.940023133 3 34 137 0.972222222 1.544068044 0.388888889 0.028571429 0.055555556 35 1 0 35 2L:4345233-4345272 6 Atet FBtr0112898|FBtr0077426|FBtr0112899|FBtr0077427 4344479|4344479|4344479|4344479 4345776|4345411|4345776|4345411 TGATAT 6mer3-8 dme-miR-283-5p 2L + 4345233 4345270 3'utr Atet FlyBase G1303.1 ATCGGAGAAGGGAACCTGGCCAACTGGTGATATAAAGC 17 4345257 0.774797544 4 17 62 1 1.431363764 0.037037037 0.470588235 0.666666667 17 0 0 27 2L:4345233-4345270 6 25 718 FBgn0020762 413.91 11.67333333 17.79666667 0.060399604 2.141633352 1.404757445 3 3 3 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2L 4345324 4345330 + 2L_4345324_4345330_+ 0.521223855 0.521223855 0.521223855 0 Atet FBtr0112898|FBtr0077426|FBtr0112899|FBtr0077427 4344479|4344479|4344479|4344479 4345776|4345411|4345776|4345411 2L + 4345274 4345349 3'utr Atet FlyBase G1646.1 TACTATTTTTACGATGGGATGCAATCGGATTTGTGTTAGCTGCGCGTATTTGTGATTATTACATTTTAATTTAGTA 254 4345323 0.973262597 18 247 2579 0.973684211 1.86923172 0.006578947 0.177165354 0.3125 254 5 3 296 2L:4345274-4345349 7 Atet FBtr0112898|FBtr0077426|FBtr0112899|FBtr0077427 4344479|4344479|4344479|4344479 4345776|4345411|4345776|4345411 TGTGATT 7mer-m1 dme-miR-308-3p 2L + 4345271 4345348 3'utr Atet FlyBase G1304.1 AATTACTATTTTTACGATGGGATGCAATCGGATTTGTGTTAGCTGCGCGTATTTGTGATTATTACATTTTAATTTAGT 164 4345323 0.796964753 19 152 1701 0.926829268 1.316542162 0.040650407 0.353658537 0.569105691 164 8 10 228 2L:4345271-4345348 7 196 719 FBgn0020762 413.91 11.67333333 17.79666667 0.473532894 16.79040548 11.01329837 1 1 1 0.01 dme-miR-980-3p 6mer3-8 GGCAGC 2L 4345435 4345440 + 2L_4345435_4345440_+ 1 1 1 0 Atet FBtr0112898|FBtr0112899 4344479|4344479 4345776|4345776 2L + 4345413 4345453 3'utr Atet FlyBase G1647.1 AACAGCACGCTCTCCTTCCTTCGGCAGCCACACCCAAAGTA 15 4345433 0.960407463 2 15 75 1 1.278753601 0.105263158 0.2 0.368421053 15 0 0 19 2L:4345413-4345453 6 Atet FBtr0112898|FBtr0112899 4344479|4344479 4345776|4345776 GGCAGC 6mer3-8 dme-miR-980-3p 2L + 4345416 4345453 3'utr Atet FlyBase G1306.1 AGCACGCTCTCCTTCCTTCGGCAGCCACACCCAAAGTA 7 4345433 0.904276849 2 6 31 0.833333333 1 0 0.571428571 0.75 7 2 0 10 2L:4345416-4345453 6 11 720 FBgn0020762 413.91 11.67333333 17.79666667 0.026575826 0.942318675 0.618093276 2 2 2 0.01 dme-miR-986-5p 6mer3-8 ATTCGA 2L 4382994 4382999 - 2L_4382994_4382999_- 1 1 1 0 CG3338 FBtr0077462 4382923 4383136 2L - 4382956 4383048 3'utr CG3338 FlyBase G7439.1 AGGTCTATCCGGTTTATATGGTTGGTATGTTTTAAGACAGCTATGGAACATTCGATTTTGTATTATTCGCAATCCATCCGCCTATTTTAAATA 14 4382983 0.987462135 9 13 123 1 1.322219295 0.142857143 0.428571429 0.619047619 14 0 0 21 2L:4382956-4383048 6 CG3338 FBtr0077462 4382923 4383136 ATTCGA 6mer3-8 dme-miR-986-5p 2L - 4382961 4382999 3'utr CG3338 FlyBase G5811.1 ATTCGATTTTGTATTATTCGCAATCCATCCGCCTATTTT 8 4382992 0.954036074 5 8 71 1 0.903089987 0.5 0 0 8 0 0 8 2L:4382961-4382999 6 5.5 721 FBgn0031598 254.6666667 10.37 15.86333333 0.021596859 0.530376085 0.346711494 -16 -7 -11.5 0.01 dme-miR-277-3p 6mer2-7 GCATTT 2L 4399866 4399871 + 2L_4399866_4399871_+ 1 1 1 0 l(2)k05819 FBtr0331447|FBtr0305968|FBtr0077432 4399732|4399732|4399732 4400487|4400105|4400105 2L + 4399852 4399882 3'utr l(2)k05819 FlyBase G1665.1 AGTTGTTTCTGTCAGCATTTGTTCTTAGGTG 5 4399871 0.717877533 4 5 50 1 0.698970004 0.2 0 0 5 0 0 5 2L:4399852-4399882 6 l(2)k05819 FBtr0305968|FBtr0331447|FBtr0077432 4399732|4399732|4399732 4400105|4400487|4400105 GCATTT 6mer2-7 dme-miR-277-3p 2L + 4399831 4399877 3'utr l(2)k05819 FlyBase G1323.1 AGTCTGGGTATCCTTAGACGAAGTTGTTTCTGTCAGCATTTGTTCTT 5 4399862 0.991013988 4 5 53 1 0.903089987 0.125 0.4 0.625 5 0 0 8 2L:4399831-4399877 6 4.5 722 FBgn0022153 937.2133333 22.65666667 34.38 0.004801468 0.198617037 0.130890052 -5 4 -0.5 0.01 dme-miR-184-5p 6mer3-8 TGATAA 2L 4446696 4446701 - 2L_4446696_4446701_- 1 1 1 0 MFS18 FBtr0077456 4446668 4446987 2L - 4446687 4446752 3'utr MFS18 FlyBase G7461.1 TATATATTTAAGAGAGTAGTTTTAAGTAGCGAAATCTTACTGCTCCTAGCGTGATAAAATACAAAT 36 4446707 0.982377547 8 32 242 0.897959184 1.342422681 0.163265306 0.25 0.448979592 36 4 1 44 2L:4446687-4446752 6 MFS18 FBtr0077456 4446668 4446987 TGATAA 6mer3-8 dme-miR-184-5p 2L - 4446677 4446743 3'utr MFS18 FlyBase G5821.1 AAGAGAGTAGTTTTAAGTAGCGAAATCTTACTGCTCCTAGCGTGATAAAATACAAATATTTAATCCT 24 4446706 0.818101911 7 21 169 0.875 0.970036777 0.21875 0.291666667 0.46875 24 2 2 28 2L:4446677-4446743 6 24.5 723 FBgn0025684 397.49 26.06 39.8 0.061636771 0.940138143 0.615577889 6 5 5.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 4446791 4446796 - 2L_4446791_4446796_- 0.755363009 0.755363009 0.755363009 0 MFS18 FBtr0077456|FBtr0077456|FBtr0077456 4446668|4446668|4446668 4446987|4446987|4446987 2L - 4446756 4446929 3'utr MFS18 FlyBase G7462.1 TTGGAGTGGATCGATTTATGTTCATGCTGCTTATATTATTTAGTATACACGTTTATGATTGACGATCATTTAGTTGTTCTTGTGAGATGTTAAAGCCAAAAAATATGTGGTATCATTGATACTTTAAAGGACCCTGTGAGTTTTAGCCAATAAATCGATTCATTCTATATATTA 33 4446788 0.987130868 17 32 312 0.975 1.591064607 0.1 0.151515152 0.3 33 1 0 39 2L:4446756-4446929 6 MFS18 FBtr0077456|FBtr0077456|FBtr0077456 4446668|4446668|4446668 4446987|4446987|4446987 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 4446761 4446864 3'utr MFS18 FlyBase G5822.1 TCATTTAGTTGTTCTTGTGAGATGTTAAAGCCAAAAAATATGTGGTATCATTGATACTTTAAAGGACCCTGTGAGTTTTAGCCAATAAATCGATTCATTCTATA 19 4446788 0.982603553 9 18 143 0.961538462 1.397940009 0.230769231 0.263157895 0.461538462 19 1 0 25 2L:4446761-4446864 6 13 724 FBgn0025684 397.49 26.06 39.8 0.032705225 0.49884881 0.326633166 -8 -8 -8 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 2L 4461630 4461635 + 2L_4461630_4461635_+ 1 1 1 0 CG15435 FBtr0077441|FBtr0345632 4461558|4461558 4461746|4461746 2L + 4461612 4461645 3'utr CG15435 FlyBase G1682.1 TGTTGACCACTTTGCATCTGTGTTTTTGTCGTAT 13 4461628 0.793264365 3 11 146 0.882352941 1.176091259 0.294117647 0.307692308 0.470588235 13 2 0 15 2L:4461612-4461645 6 CG15435 FBtr0345632|FBtr0077441 4461558|4461558 4461746|4461746 TGTGTT 6mer3-8 dme-miR-317-3p 2L + 4461611 4461648 3'utr CG15435 FlyBase G1333.1 ATGTTGACCACTTTGCATCTGTGTTTTTGTCGTATTGT 9 4461628 0.753238236 4 8 95 0.923076923 1.079181246 0.153846154 0.333333333 0.538461538 9 1 0 12 2L:4461611-4461648 6 10 725 FBgn0031608 120.9866667 8.103333333 12.34333333 0.082653736 1.234060058 0.810153929 2 2 2 0.01 dme-miR-305-5p 6mer3-8 AGTACA 2L 4461772 4461777 - 2L_4461772_4461777_- 1 1 1 0 CG15443 FBtr0335134|FBtr0077450 4461655|4461655 4461823|4461823 2L - 4461765 4461806 3'utr CG15443 FlyBase G7496.1 AGTCTTGCAAATCTCTTTATTGGTCTTAGAGTACATATAAAT 8 4461786 0.946777082 2 7 73 1 1.041392685 0 0.125 0.363636364 8 0 0 11 2L:4461765-4461806 6 CG15443 FBtr0077450|FBtr0335134 4461655|4461655 4461823|4461823 AGTACA 6mer3-8 dme-miR-305-5p 2L - 4461743 4461807 3'utr CG15443 FlyBase G5843.1 AAGTCTTGCAAATCTCTTTATTGGTCTTAGAGTACATATAAATATAAAGCCACGGACTTTTGAGT 10 4461787 0.99448713 4 7 97 0.75 0.602059991 0 0.6 0.75 10 2 2 12 2L:4461743-4461807 6 6.5 726 FBgn0031609 89.34666667 8.563333333 13.03666667 0.072750336 0.759050214 0.49859371 9 10 9.5 0.01 dme-miR-968-5p 7mer-m8 ACTACTT 2L 4478001 4478007 - 2L_4478001_4478007_- 0.631525338 0.631525338 0.631525338 0 dp FBtr0332354|FBtr0332350|FBtr0332348|FBtr0332349|FBtr0332352|FBtr0332345|FBtr0305142|FBtr0332351 4477460|4477460|4477460|4477460|4477460|4477460|4477460|4477460 4479537|4479537|4479537|4479537|4479537|4479537|4479537|4479537 2L - 4477973 4478033 3'utr dp FlyBase G7506.1 ATTAAACGTAAACAAAATGTATAGTCACTACTTTAAGAAGAAAGAGAAATTTTCTTTATAG 15 4478015 0.902368574 4 13 112 0.894736842 0.929418926 0.105263158 0.2 0.368421053 15 1 1 17 2L:4477973-4478033 7 dp FBtr0332348|FBtr0332352|FBtr0305142|FBtr0332351|FBtr0332349|FBtr0332354|FBtr0332345|FBtr0332350 4477460|4477460|4477460|4477460|4477460|4477460|4477460|4477460 4479537|4479537|4479537|4479537|4479537|4479537|4479537|4479537 ACTACTT 7mer-m8 dme-miR-968-5p 2L - 4477993 4478030 3'utr dp FlyBase G5849.1 AAACGTAAACAAAATGTATAGTCACTACTTTAAGAAGA 14 4478015 0.815687082 4 14 101 1 1.301029996 0.05 0.285714286 0.5 14 0 0 20 2L:4477993-4478030 7 13 727 FBgn0053196 31 0.07 0.11 0.419354839 185.7142857 118.1818182 8 8 8 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2L 4478340 4478346 - 2L_4478340_4478346_- 0.521192227 0.521194718 0.521193472 1.77E-06 dp FBtr0332354|FBtr0332350|FBtr0332348|FBtr0332349|FBtr0332352|FBtr0332345|FBtr0305142|FBtr0332351 4477460|4477460|4477460|4477460|4477460|4477460|4477460|4477460 4479537|4479537|4479537|4479537|4479537|4479537|4479537|4479537 2L - 4478307 4478383 3'utr dp FlyBase G7507.1 ATTTTTGTAGTTTTATAGTCAATTAATATTAAATTGTTGTGATTGTTTTTAATGCAAAAGAGATACTTCCACTAACT 30 4478340 0.992832346 8 29 344 0.973684211 1.568201724 0.184210526 0.2 0.368421053 30 1 0 37 2L:4478307-4478383 7 dp FBtr0332348|FBtr0332352|FBtr0305142|FBtr0332351|FBtr0332349|FBtr0332354|FBtr0332345|FBtr0332350 4477460|4477460|4477460|4477460|4477460|4477460|4477460|4477460 4479537|4479537|4479537|4479537|4479537|4479537|4479537|4479537 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 4478320 4478375 3'utr dp FlyBase G5850.1 AGTTTTATAGTCAATTAATATTAAATTGTTGTGATTGTTTTTAATGCAAAAGAGAT 25 4478340 0.883336653 8 25 286 1 1.544068044 0.114285714 0.32 0.514285714 25 0 0 35 2L:4478320-4478375 7 23.5 728 FBgn0053196 31 0.07 0.11 0.758064516 335.7142857 213.6363636 -6 -6 -6 0.01 dme-miR-34-5p 7mer-A1 ACTGCCA 2L 4478549 4478555 - 2L_4478549_4478555_- 0.823349562 0.823349562 0.823349562 0 dp FBtr0332354|FBtr0332350|FBtr0332348|FBtr0332349|FBtr0332352|FBtr0332345|FBtr0305142|FBtr0332351 4477460|4477460|4477460|4477460|4477460|4477460|4477460|4477460 4479537|4479537|4479537|4479537|4479537|4479537|4479537|4479537 2L - 4478534 4478579 3'utr dp FlyBase G7509.1 AATCGTTGAGGGAACATAACTATAACTGCCACTGAGGCGTCATCAG 7 4478557 0.96277779 4 7 37 1 0.954242509 0.222222222 0.285714286 0.444444444 7 0 0 9 2L:4478534-4478579 7 dp FBtr0332348|FBtr0332352|FBtr0305142|FBtr0332351|FBtr0332349|FBtr0332354|FBtr0332345|FBtr0332350 4477460|4477460|4477460|4477460|4477460|4477460|4477460|4477460 4479537|4479537|4479537|4479537|4479537|4479537|4479537|4479537 ACTGCCA 7mer-A1 dme-miR-34-5p 2L - 4478528 4478572 3'utr dp FlyBase G5852.1 GAGGGAACATAACTATAACTGCCACTGAGGCGTCATCAGCGCACA 12 4478557 0.71301643 2 10 55 0.928571429 1.113943352 0.642857143 0.166666667 0.285714286 12 1 0 13 2L:4478528-4478572 7 9 729 FBgn0053196 31 0.07 0.11 0.290322581 128.5714286 81.81818182 2 2 2 0.01 dme-miR-1002-5p 6mer3-8 CTACTT 2L 447936 447941 + 2L_447936_447941_+ 0.99988747 0.999894672 0.999891071 5.09E-06 ex FBtr0329832|FBtr0078059 447248|447248 448701|448701 2L + 447898 447979 3'utr ex FlyBase G792.2 TACTTAGTTAGGCCAGAAATGCGAATACTTAAAACTAACTACTTCCGCCCAAACAACTGTGATTGATTTTTATTTAAACTTA 2898 447940 0.9175729 20 2867 12252 0.990640953 2.543198586 0.033465683 0.178743961 0.32501418 2898 24 9 3493 2L:447898-447979 6 ex FBtr0329832|FBtr0078059 447248|447248 448701|448701 CTACTT 6mer3-8 dme-miR-1002-5p 2L + 447895 447978 3'utr ex FlyBase G634.1 AAATACTTAGTTAGGCCAGAAATGCGAATACTTAAAACTAACTACTTCCGCCCAAACAACTGTGATTGATTTTTATTTAAACTT 1793 447940 0.847468128 16 1743 7292 0.97739066 2.46686762 0.026315789 0.357501394 0.57301705 1793 53 8 2637 2L:447895-447978 6 2135.5 730 FBgn0004583 1742.906667 31.79333333 48.95666667 1.225252069 67.16816943 43.62020835 -4 -4 -4 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 2L 4479454 4479459 - 2L_4479454_4479459_- 1 1 1 0 dp FBtr0332354|FBtr0332350|FBtr0332348|FBtr0332349|FBtr0332352|FBtr0332345|FBtr0305142|FBtr0332351 4477460|4477460|4477460|4477460|4477460|4477460|4477460|4477460 4479537|4479537|4479537|4479537|4479537|4479537|4479537|4479537 2L - 4479434 4479465 3'utr dp FlyBase G7512.1 GAAAAAGAAAAAATTGTGAATATTTGAAAGGC 12 4479452 0.966147962 3 12 68 1 1.204119983 0.375 0.333333333 0.5 12 0 0 16 2L:4479434-4479465 6 dp FBtr0332348|FBtr0332352|FBtr0305142|FBtr0332351|FBtr0332349|FBtr0332354|FBtr0332345|FBtr0332350 4477460|4477460|4477460|4477460|4477460|4477460|4477460|4477460 4479537|4479537|4479537|4479537|4479537|4479537|4479537|4479537 GAAAAA 6mer3-8 dme-miR-980-5p 2L - 4479434 4479465 3'utr dp FlyBase G5853.1 GAAAAAGAAAAAATTGTGAATATTTGAAAGGC 10 4479452 0.967675153 2 10 56 1 1.079181246 0.083333333 0.2 0.333333333 10 0 0 12 2L:4479434-4479465 6 11 731 FBgn0053196 31 0.07 0.11 0.35483871 157.1428571 100 -7 -7 -7 0.01 dme-miR-31a-5p 6mer2-7 CTTGCC 2L 448212 448217 + 2L_448212_448217_+ 1 1 1 0 ex FBtr0329832|FBtr0078059 447248|447248 448701|448701 2L + 448189 448260 3'utr ex FlyBase G794.2 AAAGAATTTCAAGAGTGCCTAGACTTGCCCTCCATCCCCACCATAGTAATAAGCGAGAGATGATTATCATTT 270 448214 0.763266071 11 264 1407 0.976744186 2.46834733 0.172757475 0.1 0.19269103 270 7 0 294 2L:448189-448260 6 ex FBtr0329832|FBtr0078059 447248|447248 448701|448701 CTTGCC 6mer2-7 dme-miR-31a-5p 2L + 448181 448271 3'utr ex FlyBase G635.1 AGGGAACTAAAGAATTTCAAGAGTGCCTAGACTTGCCCTCCATCCCCACCATAGTAATAAGCGAGAGATGATTATCATTTATTTTTTGTAT 152 448214 0.947407549 8 148 791 0.974248927 2.356025857 0.111587983 0.394736842 0.605150215 152 6 0 227 2L:448181-448271 6 200 732 FBgn0004583 1742.906667 31.79333333 48.95666667 0.114750838 6.290626966 4.085245455 -2 -2 -2 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 448867 448873 - 2L_448867_448873_- 0.801970437 0.801970437 0.801970437 0 crq FBtr0078087|FBtr0078087|FBtr0078087|FBtr0331233|FBtr0331233|FBtr0331233 448252|448252|448252|448252|448252|448252 449020|449020|449020|449020|449020|449020 2L - 448816 449139 stop_codon crq FlyBase G6564.1 TATTCGGCTATTCCATGATAGCTTTTGCCAGTGTCTTTCTCATCACCGGCATCACGCTGACTGTGACGAAAAAGTGGGTGCGGCGAACTCCCGAGGATGAGGACATACTTACCAACTAGAGCAAAATAGTTTTTAAGCTTTGCCAAAGTGCCAGGAATTGTTAACTCTCCTAGTTCATTCTGATAGTCGCCCGTCAAATGCTGTTCTTTGTCAGTTATGCGTTATGTAATATGTAAGTGATACGAATCGACGTTCGTCTTGCAGTTTGTGATAGCAAAACCTACTCTAAAAAAAAAACTAAAAACTACTCTAACTCTAAAAAAA 807 448874 0.937649723 54 760 6212 0.944265809 1.564764667 0.175777063 0.133828996 0.250803859 807 29 23 881 2L:448816-449139 7 crq FBtr0331232|FBtr0331232|FBtr0331232|FBtr0078088|FBtr0078088|FBtr0078088|FBtr0078087|FBtr0078087|FBtr0078087|FBtr0331233|FBtr0331233|FBtr0331233|FBtr0304741|FBtr0304741|FBtr0304741 448714|448714|448714|448714|448714|448714|448252|448252|448252|448252|448252|448252|448714|448714|448714 449020|449020|449020|449020|449020|449020|449020|449020|449020|449020|449020|449020|449020|449020|449020 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 448819 449017 3'utr crq FlyBase G5128.1 AAAATAGTTTTTAAGCTTTGCCAAAGTGCCAGGAATTGTTAACTCTCCTAGTTCATTCTGATAGTCGCCCGTCAAATGCTGTTCTTTGTCAGTTATGCGTTATGTAATATGTAAGTGATACGAATCGACGTTCGTCTTGCAGTTTGTGATAGCAAAACCTACTCTAAAAAAAAAACTAAAAACTACTCTAACTCTAAAA 473 448874 0.938145021 44 452 3729 0.952574526 1.700827289 0.185636856 0.412262156 0.623306233 473 22 13 703 2L:448819-449017 7 372.5 733 FBgn0015924 1407.533333 61.27666667 93.41333333 0.264647374 6.07898602 3.98765344 1 1 1 0.01 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 459178 459185 - 2L_459178_459185_- 0.625364919 0.625364919 0.625364919 0 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 459149 459233 3'utr CG4297 FlyBase G6578.1 AGCTTCTAAATGTATGTTCATTCGTTGGTAACTTTTACGACTAAGTAATACGCTTAATTTTAGTACAAACAAAATACAAAGTGCA 32 459185 0.98377861 10 32 245 1 1.579783597 0.105263158 0.1875 0.315789474 32 0 0 38 2L:459149-459233 8 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 TACGCTTA 8mer-A1 dme-miR-965-3p 2L - 459158 459234 3'utr CG4297 FlyBase G5138.1 AAGCTTCTAAATGTATGTTCATTCGTTGGTAACTTTTACGACTAAGTAATACGCTTAATTTTAGTACAAACAAAATA 17 459185 0.964547922 6 16 130 0.875 1.322219295 0.083333333 0.294117647 0.5 17 3 0 21 2L:459158-459234 8 19.5 734 FBgn0031258 226.3333333 3.93 5.996666667 0.086156112 4.961832061 3.251806559 0 0 0 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 2L 459276 459281 - 2L_459276_459281_- 1 1 1 0 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 459257 459300 3'utr CG4297 FlyBase G6579.1 CTTTTTCTCGTAACACATTCCAAAGGACCAAACATTTTGAAACT 42 459283 0.716370799 3 42 112 1 1.73239376 0.185185185 0.261904762 0.425925926 42 0 0 54 2L:459257-459300 6 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 459253 459294 3'utr CG4297 FlyBase G5139.1 CTCGTAACACATTCCAAAGGACCAAACATTTTGAAACTAATA 35 459283 0.883890613 2 34 93 1 1.72427587 0.037735849 0.441176471 0.641509434 34 0 0 53 2L:459253-459294 6 37 735 FBgn0031258 226.3333333 3.93 5.996666667 0.1634757 9.41475827 6.170094497 2 2 2 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2L 459373 459379 - 2L_459373_459379_- 0.661615511 0.661615511 0.661615511 0 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 459352 459417 3'utr CG4297 FlyBase G6580.1 AAGGGCAATGCCAACTATGAAATAGACTTGGATGCTGGTCTAGTCTTAGAATCCTAGCCCACAGCA 81 459372 0.961460502 6 79 567 0.989583333 1.977723605 0.145833333 0.185185185 0.3125 81 1 0 95 2L:459352-459417 7 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2L - 459351 459416 3'utr CG4297 FlyBase G5140.1 AGGGCAATGCCAACTATGAAATAGACTTGGATGCTGGTCTAGTCTTAGAATCCTAGCCCACAGCAA 43 459372 0.924453088 9 40 315 0.943661972 1.224014811 0.225352113 0.418604651 0.647887324 43 1 3 67 2L:459351-459416 7 48.5 736 FBgn0031258 226.3333333 3.93 5.996666667 0.214285714 12.34096692 8.08782657 -7 -7 -7 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 459745 459750 - 2L_459745_459750_- 1 1 1 0 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 459668 459767 3'utr CG4297 FlyBase G6582.1 CATCTGTTGCAATTGTTTGATCTGTTAGTAGCCGAAGACTTTGTTTTAGTGCAATTATTTGTTAGGTTCCTAGAGCAATTTGTTGTGTTTATTTTAAGAT 44 459726 0.770975045 15 43 409 0.979166667 1.672097858 0.104166667 0.090909091 0.166666667 44 1 0 47 2L:459668-459767 6 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 TGATCT 6mer3-8 dme-bantam-3p 2L - 459684 459768 3'utr CG4297 FlyBase G5141.1 ACATCTGTTGCAATTGTTTGATCTGTTAGTAGCCGAAGACTTTGTTTTAGTGCAATTATTTGTTAGGTTCCTAGAGCAATTTGTT 47 459726 0.989408011 12 44 424 0.947368421 1.857332496 0.157894737 0.468085106 0.671052632 47 4 0 72 2L:459684-459768 6 25 737 FBgn0031258 226.3333333 3.93 5.996666667 0.110456554 6.361323155 4.168982768 -24 -24 -24 0.01 dme-miR-33-5p 6mer2-7 AATGCA 2L 459801 459806 - 2L_459801_459806_- 1 1 1 0 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 459779 459822 3'utr CG4297 FlyBase G6582.2 TAAATTTTTGCCACCAAATGCAGCCTAGACCAAAAACTAAAAGA 25 459804 0.965797943 4 22 68 0.970588235 1.51851394 0 0.375 0.558823529 24 1 0 33 2L:459779-459822 6 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 AATGCA 6mer2-7 dme-miR-33-5p 2L - 459783 459816 3'utr CG4297 FlyBase G5142.1 TTTGCCACCAAATGCAGCCTAGACCAAAAACTAA 19 459804 0.963185869 2 18 52 0.962962963 1.414973348 0.037037037 0.210526316 0.444444444 19 1 0 26 2L:459783-459816 6 20.5 738 FBgn0031258 226.3333333 3.93 5.996666667 0.090574374 5.216284987 3.41856587 -2 -2 -2 0.01 dme-miR-986-5p 6mer3-8 ATTCGA 2L 460151 460156 - 2L_460151_460156_- 0.999998098 0.988349926 0.994174012 0.008236521 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 460123 460213 3'utr CG4297 FlyBase G6584.1 TTTAGATATCTGTGCAATATTTACATGGAAAATGTCGTGTTTATCTGGAATGCGCGAATTCGAATCTCGATGGGTAAAGCATGAGTAAGCA 17 460143 0.787901674 8 14 117 0.791666667 1.278753601 0.25 0.352941176 0.541666667 17 5 0 19 2L:460123-460213 6 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 ATTCGA 6mer3-8 dme-miR-986-5p 2L - 460135 460180 3'utr CG4297 FlyBase G5144.1 GTCGTGTTTATCTGGAATGCGCGAATTCGAATCTCGATGGGTAAAG 8 460154 0.837338443 7 8 43 1 1 0.6 0.25 0.4 8 0 0 10 2L:460135-460180 6 7 739 FBgn0031258 226.3333333 3.93 5.996666667 0.030927835 1.781170483 1.167315175 -13 -2 -7.5 0.01 dme-miR-92b-3p 8mer-A1 GTGCAATA 2L 460195 460202 - 2L_460195_460202_- 0.628916032 0.628916032 0.628916032 0 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 460123 460213 3'utr CG4297 FlyBase G6584.1 TTTAGATATCTGTGCAATATTTACATGGAAAATGTCGTGTTTATCTGGAATGCGCGAATTCGAATCTCGATGGGTAAAGCATGAGTAAGCA 17 460203 0.787901674 8 14 117 0.791666667 1.278753601 0.25 0.352941176 0.541666667 17 5 0 19 2L:460123-460213 8 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 GTGCAATA 8mer-A1 dme-miR-92b-3p 2L - 460190 460220 3'utr CG4297 FlyBase G5145.1 TATATATTTTAGATATCTGTGCAATATTTAC 5 460203 0.795599538 2 4 50 0.888888889 0.903089987 0.111111111 0.4 0.666666667 5 1 0 8 2L:460190-460220 8 5.5 740 FBgn0031258 226.3333333 3.93 5.996666667 0.024300442 1.399491094 0.917176209 1 1 1 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2L 460327 460332 - 2L_460327_460332_- 1 1 1 0 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 460261 460425 3'utr CG4297 FlyBase G6585.1 ATAAAAGAAACACCACACGTACACTTTAGATACACCACAAAACAAGAAAACTAAAGATATGGATGCAAAAGCAGCTACACTTTACAGAATCTCAAGACTTTTTTTAACATTTGGATTTATTTAAGGAAACGAAATGTAGCGTAATATAGTCATTTTAGGAAAATC 251 460325 0.984723099 25 243 1953 0.974842767 1.889301703 0.034591195 0.219123506 0.383647799 251 5 3 310 2L:460261-460425 6 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 AAGACT 6mer3-8 dme-miR-14-3p 2L - 460273 460382 3'utr CG4297 FlyBase G5146.1 AAGAAAACTAAAGATATGGATGCAAAAGCAGCTACACTTTACAGAATCTCAAGACTTTTTTTAACATTTGGATTTATTTAAGGAAACGAAATGTAGCGTAATATAGTCAT 155 460325 0.987101545 20 150 1308 0.976851852 2.02325246 0.009259259 0.316129032 0.509259259 155 4 1 211 2L:460273-460382 6 172.5 741 FBgn0031258 226.3333333 3.93 5.996666667 0.762150221 43.89312977 28.7659811 -7 -7 -7 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC 2L 460460 460466 - 2L_460460_460466_- 0.661615645 0.661615645 0.661615645 0 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 460451 460525 stop_codon CG4297 FlyBase G6586.1 AAGTCAAATAGGATTGCAGCTTCTACCAAAGATATTTCTGGTCCCTGGACAGGATCAGATGTGTTCGGCTCGTCG 32 460464 0.821810637 9 26 229 0.8 1.146128036 0.085714286 0.0625 0.142857143 32 6 1 28 2L:460451-460525 7 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 TGTGTTC 7mer-m8 dme-miR-317-3p 2L - 460450 460516 stop_codon CG4297 FlyBase G5147.1 AGGATTGCAGCTTCTACCAAAGATATTTCTGGTCCCTGGACAGGATCAGATGTGTTCGGCTCGTCGA 19 460465 0.849296098 7 18 141 0.961538462 1.397940009 0.153846154 0.315789474 0.5 19 1 0 25 2L:460450-460516 7 10 742 FBgn0031258 226.3333333 3.93 5.996666667 0.044182622 2.544529262 1.667593107 -2 -1 -1.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 2L 460494 460501 - 2L_460494_460501_- 0.64356496 0.64356572 0.64356534 4.95E-07 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 460451 460525 stop_codon CG4297 FlyBase G6586.1 AAGTCAAATAGGATTGCAGCTTCTACCAAAGATATTTCTGGTCCCTGGACAGGATCAGATGTGTTCGGCTCGTCG 32 460502 0.821810637 9 26 229 0.8 1.146128036 0.085714286 0.0625 0.142857143 32 6 1 28 2L:460451-460525 8 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 460450 460516 stop_codon CG4297 FlyBase G5147.1 AGGATTGCAGCTTCTACCAAAGATATTTCTGGTCCCTGGACAGGATCAGATGTGTTCGGCTCGTCGA 19 460502 0.849296098 7 18 141 0.961538462 1.397940009 0.153846154 0.315789474 0.5 19 1 0 25 2L:460450-460516 8 12.5 743 FBgn0031258 226.3333333 3.93 5.996666667 0.055228277 3.180661578 2.084491384 1 1 1 0.01 dme-miR-190-5p 6mer3-8 ACATAT 2L 476118 476123 + 2L_476118_476123_+ 1 1 1 0 MED15 FBtr0078062 475801 476170 2L + 476112 476148 3'utr MED15 FlyBase G826.1 ATTTTAACATATAAGACAAATGGCTTTTATAGCTAAA 8 476132 0.928025895 2 8 52 1 0.903089987 0.25 0 0 8 0 0 8 2L:476112-476148 6 MED15 FBtr0078062 475801 476170 ACATAT 6mer3-8 dme-miR-190-5p 2L + 476115 476148 3'utr MED15 FlyBase G657.1 TTAACATATAAGACAAATGGCTTTTATAGCTAAA 5 476135 0.982268784 2 4 32 0.833333333 0.698970004 0 0.2 0.333333333 5 1 0 5 2L:476115-476148 6 2.5 744 FBgn0027592 861.2266667 40.15 61.36 0.002902836 0.062266501 0.040743155 -14 -17 -15.5 0.01 dme-miR-1012-3p 6mer2-7 TGACTA 2L 4835534 4835539 - 2L_4835534_4835539_- 1 1 1 0 tank FBtr0077412|FBtr0077413 4835333|4835333 4835739|4835739 2L - 4835506 4835563 3'utr tank FlyBase G7565.1 ACAACGCCCTATTCGGAATGGGCATGACTATATATATATAGACTATAGAGTGGCTATA 47 4835525 0.941930015 7 44 337 0.948275862 1.439332694 0.155172414 0.191489362 0.344827586 47 2 1 55 2L:4835506-4835563 6 tank FBtr0077412|FBtr0077413 4835333|4835333 4835739|4835739 TGACTA 6mer2-7 dme-miR-1012-3p 2L - 4835485 4835547 3'utr tank FlyBase G5889.1 AATGGGCATGACTATATATATATAGACTATAGAGTGGCTATATCTGAAATGCGGCTCGCGCAA 34 4835525 0.977682833 7 34 220 1 1.72427587 0.037735849 0.323529412 0.566037736 34 0 0 53 2L:4835485-4835547 6 27.5 745 FBgn0031635 351.94 19.15666667 29.10666667 0.078138319 1.435531582 0.944800733 -14 -14 -14 0.01 dme-miR-995-5p 6mer3-8 AATTCG 2L 4835693 4835698 - 2L_4835693_4835698_- 0.999920211 0.814270462 0.907095336 0.131274162 tank FBtr0077412|FBtr0077413 4835333|4835333 4835739|4835739 2L - 4835630 4835914 stop_codon tank FlyBase G7567.1 AACGCACAGCTCCAATGCGCCGAGCATTAATAGCCATCGGCCGCCGCCTTATTACGGCAGCTCGCTGCGCGGAGCTGCGCCTTTGGTGCCCACTCCTGTGCCCGGTGCACCGAGAGCTCCGCTAACCCCGCCCGTGATACGCCAGGAGTCGGGGCCCGATGACTGGAACTTGTGAGATTTATGCTTATACACGCAACGTAGGCTTTAGCTATATATAATTCGATCTGTGTAATCTACGTATCATCTACCTATCTAACCATCGTGAACTGTGTAAGTTAAAGATAA 120 4835710 0.978391281 36 115 765 0.958041958 1.835690571 0.188811189 0.158333333 0.293706294 120 5 1 137 2L:4835630-4835914 6 tank FBtr0077412|FBtr0077413 4835333|4835333 4835739|4835739 AATTCG 6mer3-8 dme-miR-995-5p 2L - 4835642 4835840 stop_codon tank FlyBase G5890.1 CTGCGCCTTTGGTGCCCACTCCTGTGCCCGGTGCACCGAGAGCTCCGCTAACCCCGCCCGTGATACGCCAGGAGTCGGGGCCCGATGACTGGAACTTGTGAGATTTATGCTTATACACGCAACGTAGGCTTTAGCTATATATAATTCGATCTGTGTAATCTACGTATCATCTACCTATCTAACCATCGTGAACTGTGTA 92 4835710 0.983255391 29 84 633 0.893617021 1.401400541 0.14893617 0.413043478 0.617021277 92 11 4 126 2L:4835642-4835840 6 16.5 746 FBgn0031635 351.94 19.15666667 29.10666667 0.046882991 0.861318949 0.56688044 12 12 12 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2L 4841642 4841648 - 2L_4841642_4841648_- 0.661615511 0.661615511 0.661615511 0 mxt FBtr0077410|FBtr0332479 4841480|4841480 4842233|4842233 2L - 4841619 4841679 3'utr mxt FlyBase G7575.1 TTTTCAAGATTTGAAATTGTATTTTGTTTTCTCTAGTCTATGCATCATAGAAATTTGTATA 26 4841640 0.993160799 6 24 288 0.931034483 1.431363764 0.137931034 0.115384615 0.206896552 26 2 0 27 2L:4841619-4841679 7 mxt FBtr0332479|FBtr0077410 4841480|4841480 4842233|4842233 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2L - 4841629 4841658 3'utr mxt FlyBase G5894.1 TTTTGTTTTCTCTAGTCTATGCATCATAGA 18 4841640 0.826571868 3 18 178 1 1.361727836 0.217391304 0.277777778 0.434782609 18 0 0 23 2L:4841629-4841658 7 20.5 747 FBgn0031637 825.01 33.64666667 51.55333333 0.024848184 0.609272835 0.39764645 -8 -8 -8 0.01 dme-miR-980-3p 7mer-A1 GCAGCTA 2L 4841919 4841925 - 2L_4841919_4841925_- 0.823349562 0.823349561 0.823349561 0 mxt FBtr0077410|FBtr0332479 4841480|4841480 4842233|4842233 2L - 4841907 4841940 3'utr mxt FlyBase G7576.1 ACTAATTCAAAAAATGCAGCTAAATGAAAAGCCT 10 4841926 0.935437701 2 7 37 0.818181818 0.954242509 0 0.1 0.181818182 10 2 0 9 2L:4841907-4841940 7 mxt FBtr0332479|FBtr0077410 4841480|4841480 4842233|4842233 GCAGCTA 7mer-A1 dme-miR-980-3p 2L - 4841889 4841937 3'utr mxt FlyBase G5895.1 AATTCAAAAAATGCAGCTAAATGAAAAGCCTCGAAGCGGCCCTAACTTG 16 4841926 0.951671458 3 12 53 0.708333333 1.230448921 0.041666667 0.4375 0.625 16 7 0 17 2L:4841889-4841937 7 10.5 748 FBgn0031637 825.01 33.64666667 51.55333333 0.012727118 0.312066574 0.203672572 1 1 1 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 2L 4841980 4841985 - 2L_4841980_4841985_- 1 1 1 0 mxt FBtr0077410|FBtr0332479 4841480|4841480 4842233|4842233 2L - 4841976 4842010 3'utr mxt FlyBase G7577.1 AACTAGAAAATTCAACGAAGCTCTTAGTTAAGTTC 26 4841987 0.732248944 2 25 168 1 1.477121255 0 0.153846154 0.266666667 26 0 0 30 2L:4841976-4842010 6 mxt FBtr0332479|FBtr0077410 4841480|4841480 4842233|4842233 AGTTAA 6mer3-8 dme-miR-999-3p 2L - 4841976 4842010 3'utr mxt FlyBase G5896.1 AACTAGAAAATTCAACGAAGCTCTTAGTTAAGTTC 12 4841987 0.712871479 3 11 82 0.941176471 1.204119983 0 0.25 0.470588235 12 1 0 16 2L:4841976-4842010 6 18.5 749 FBgn0031637 825.01 33.64666667 51.55333333 0.022423971 0.549831583 0.358851675 2 2 2 0.01 dme-miR-33-5p 6mer3-8 CAATGC 2L 4842144 4842149 - 2L_4842144_4842149_- 1 1 1 0 mxt FBtr0077410|FBtr0332477|FBtr0332479|FBtr0077409|FBtr0332478|FBtr0077411 4841480|4842088|4841480|4842088|4842088|4842088 4842233|4842233|4842233|4842233|4842233|4842233 2L - 4842123 4842154 3'utr mxt FlyBase G7578.1 TGCTTCAATGCTTTTGGCCATGGCCACATCTA 6 4842140 0.93276304 3 6 44 1 0.903089987 0.25 0.166666667 0.375 6 0 0 8 2L:4842123-4842154 6 mxt FBtr0332478|FBtr0077411|FBtr0077409|FBtr0332477|FBtr0332479|FBtr0077410 4842088|4842088|4842088|4842088|4841480|4841480 4842233|4842233|4842233|4842233|4842233|4842233 CAATGC 6mer3-8 dme-miR-33-5p 2L - 4842121 4842167 3'utr mxt FlyBase G5897.1 CGGAGCTGCAGTATGCTTCAATGCTTTTGGCCATGGCCACATCTAAC 7 4842141 0.985224607 6 7 52 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 2L:4842121-4842167 6 6.5 750 FBgn0031637 825.01 33.64666667 51.55333333 0.007878692 0.19318407 0.126083021 -9 -8 -8.5 0.01 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 4842739 4842745 - 2L_4842739_4842745_- 0.823349562 0.823349562 0.823349562 0 mxt FBtr0300941 4842582 4843059 2L - 4842695 4842881 3'utr mxt FlyBase G7581.1 ATCATTATCATTATCATCATCCAGTCATTAGATTAACGACATACCATCGAAACCAAACCGATCGCTAGTCTTAGAGGTAACAATACATATAATGCATTGAAATTAAAATGTAACTATAGGGAGAATCTGTGTTTTGGCTGTGAAACAGATTAAGTCGTCGCTAAGGATAAGCTGGAAAGGCGGTTGA 574 4842747 0.913793421 22 562 3508 0.981077147 2.527629901 0.288209607 0.160278746 0.298398836 574 12 1 674 2L:4842695-4842881 7 mxt FBtr0300941 4842582 4843059 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L - 4842695 4842873 3'utr mxt FlyBase G5898.1 CATTATCATCATCCAGTCATTAGATTAACGACATACCATCGAAACCAAACCGATCGCTAGTCTTAGAGGTAACAATACATATAATGCATTGAAATTAAAATGTAACTATAGGGAGAATCTGTGTTTTGGCTGTGAAACAGATTAAGTCGTCGCTAAGGATAAGCTGGAAAGGCGGTTGA 328 4842747 0.933448488 18 320 1968 0.968283582 2.715167358 0.229477612 0.457317073 0.667910448 328 17 0 519 2L:4842695-4842873 7 171 751 FBgn0031637 825.01 33.64666667 51.55333333 0.207270215 5.082227066 3.316953317 2 2 2 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 2L 4842812 4842817 - 2L_4842812_4842817_- 1 1 1 0 mxt FBtr0300941 4842582 4843059 2L - 4842695 4842881 3'utr mxt FlyBase G7581.1 ATCATTATCATTATCATCATCCAGTCATTAGATTAACGACATACCATCGAAACCAAACCGATCGCTAGTCTTAGAGGTAACAATACATATAATGCATTGAAATTAAAATGTAACTATAGGGAGAATCTGTGTTTTGGCTGTGAAACAGATTAAGTCGTCGCTAAGGATAAGCTGGAAAGGCGGTTGA 574 4842811 0.913793421 22 562 3508 0.981077147 2.527629901 0.288209607 0.160278746 0.298398836 574 12 1 674 2L:4842695-4842881 6 mxt FBtr0300941 4842582 4843059 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 2L - 4842695 4842873 3'utr mxt FlyBase G5898.1 CATTATCATCATCCAGTCATTAGATTAACGACATACCATCGAAACCAAACCGATCGCTAGTCTTAGAGGTAACAATACATATAATGCATTGAAATTAAAATGTAACTATAGGGAGAATCTGTGTTTTGGCTGTGAAACAGATTAAGTCGTCGCTAAGGATAAGCTGGAAAGGCGGTTGA 328 4842811 0.933448488 18 320 1968 0.968283582 2.715167358 0.229477612 0.457317073 0.667910448 328 17 0 519 2L:4842695-4842873 6 258 752 FBgn0031637 825.01 33.64666667 51.55333333 0.312723482 7.667921538 5.004526057 -6 -6 -6 0.01 dme-miR-8-3p 7mer-m8 CAGTATT 2L 4842961 4842967 - 2L_4842961_4842967_- 0.661615243 0.661615243 0.661615243 0 mxt FBtr0300941 4842582 4843059 2L - 4842915 4843031 3'utr mxt FlyBase G7582.1 AATTTTACGTAGCCGGAATACGTATTATTGAATCTCAGTCACAGATAGGCTTTTCTTTTCATGTCAGTATTTTTGCTGTTTTAATTTTATATAACTTATCATTAAGAAAAGGTGAAG 99 4842970 0.990269486 14 95 956 0.964912281 1.740362689 0.061403509 0.131313131 0.245614035 99 3 1 110 2L:4842915-4843031 7 mxt FBtr0300941 4842582 4843059 CAGTATT 7mer-m8 dme-miR-8-3p 2L - 4842943 4843032 3'utr mxt FlyBase G5899.2 TAATTTTACGTAGCCGGAATACGTATTATTGAATCTCAGTCACAGATAGGCTTTTCTTTTCATGTCAGTATTTTTGCTGTTTTAATTTTA 87 4842979 0.722695713 18 83 801 0.960629921 2.086359831 0.086614173 0.310344828 0.527559055 87 5 0 122 2L:4842943-4843032 7 27 753 FBgn0031637 825.01 33.64666667 51.55333333 0.032726876 0.802456905 0.523729471 3 12 7.5 0.01 dme-bantam-3p 6mer2-7 GATCTC 2L 4878074 4878079 - 2L_4878074_4878079_- 1 1 1 0 Cf2 FBtr0336835|FBtr0304887|FBtr0089647|FBtr0089648|FBtr0089649 4877108|4876889|4877108|4877108|4877108 4879020|4879020|4879020|4879020|4879020 2L - 4878051 4878095 3'utr Cf2 FlyBase G7598.1 ATTTGCACACGAGCAGGATCTCGTTTGTTTTGGCTTTAAAAATTT 27 4878071 0.617901184 4 26 195 0.96969697 1.505149978 0.303030303 0.222222222 0.363636364 27 1 0 32 2L:4878051-4878095 6 Cf2 FBtr0089649|FBtr0089647|FBtr0089648|FBtr0336835|FBtr0304887 4877108|4877108|4877108|4877108|4876889 4879020|4879020|4879020|4879020|4879020 GATCTC 6mer2-7 dme-bantam-3p 2L - 4878019 4878095 3'utr Cf2 FlyBase G5907.1 ATTTGCACACGAGCAGGATCTCGTTTGTTTTGGCTTTAAAAATTTATTTACTTTTAATTAACTAAATGATCTAATCA 42 4878071 0.842401719 9 39 354 0.949152542 1.146128036 0.101694915 0.357142857 0.542372881 42 0 3 56 2L:4878019-4878095 6 27 754 FBgn0000286 431.7866667 13.5 20.64333333 0.062530879 2 1.307928306 -8 -8 -8 0.01 dme-miR-304-5p 8mer-A1 TGAGATTA 2L 4903289 4903296 + 2L_4903289_4903296_+ 0.625363359 0.625363359 0.625363359 0 CG3036 FBtr0077391|FBtr0336832 4903152|4903152 4903889|4903458 2L + 4903266 4903313 3'utr CG3036 FlyBase G1739.1 TAAAGTAGTTGTTACTCCCACATTGAGATTACGGGGCTTTCATTTGGC 65 4903288 0.879752084 2 64 520 0.95890411 1.84509804 0.082191781 0.092307692 0.191780822 65 3 0 70 2L:4903266-4903313 8 CG3036 FBtr0077391|FBtr0336832 4903152|4903152 4903889|4903458 TGAGATTA 8mer-A1 dme-miR-304-5p 2L + 4903269 4903311 3'utr CG3036 FlyBase G1375.1 AGTAGTTGTTACTCCCACATTGAGATTACGGGGCTTTCATTTG 32 4903288 0.847297904 4 32 230 1 1.707570176 0.137254902 0.46875 0.666666667 32 0 0 51 2L:4903269-4903311 8 48 755 FBgn0031645 281.25 12.45666667 19.09 0.170666667 3.853358309 2.514405448 1 1 1 0.01 dme-miR-965-3p 6mer2-7 ACGCTT 2L 4947905 4947910 + 2L_4947905_4947910_+ 1 1 1 0 betaggt-I FBtr0330714|FBtr0078991 4947866|4947832 4948324|4948324 2L + 4947847 4947930 stop_codon betaggt-I FlyBase G1751.1 AAAGCACGAGGGGAAAGTTAAAGCACACTATTGTATTTATATTGGCCACATTTTAGCCACGCTTTTTATGCCCTTGCAGTTAGT 43 4947911 0.991726943 11 35 385 0.829787234 1.290034611 0.212765957 0.093023256 0.170212766 43 7 1 39 2L:4947847-4947930 6 betaggt-I FBtr0078991|FBtr0330714 4947832|4947866 4948324|4948324 ACGCTT 6mer2-7 dme-miR-965-3p 2L + 4947842 4947930 stop_codon betaggt-I FlyBase G1380.1 CGCACAAAGCACGAGGGGAAAGTTAAAGCACACTATTGTATTTATATTGGCCACATTTTAGCCACGCTTTTTATGCCCTTGCAGTTAGT 23 4947912 0.989239742 11 20 195 0.875 1.06694679 0.375 0.47826087 0.7 23 3 2 35 2L:4947842-4947930 6 16 756 FBgn0015000 534.58 37.06666667 56.91333333 0.029930039 0.431654676 0.281129202 -6 -7 -6.5 0.01 dme-miR-79-3p 6mer2-7 AGCTTT 2L 4948199 4948204 + 2L_4948199_4948204_+ 0.9999997 0.999999972 0.999999836 2.12E-07 betaggt-I FBtr0330714|FBtr0078991 4947866|4947832 4948324|4948324 2L + 4948101 4948323 3'utr betaggt-I FlyBase G1753.1 CGGTATAAATGTTATAATTACTGCAAGGGTATATAAGTTTCGGCTTGCCGATTCTAGCTTACTTTCTGGTTTACATGTATTTTAATGCAAAAAGCTCGAGCTTTTGGAGAGAGAGATGAATAAGTTAGTATGTTTATTGTACAGCCTAAATTAATGTTAACAATGTGTAAGATTAAGCTTAAAAGTAAATTAAAGCGTCCCATGCTGAGGCATGTATTTACAG 64 4948204 0.983853615 27 59 466 0.918918919 1.832508913 0.216216216 0.140625 0.256756757 64 6 0 68 2L:4948101-4948323 6 betaggt-I FBtr0078991|FBtr0330714 4947832|4947866 4948324|4948324 AGCTTT 6mer2-7 dme-miR-79-3p 2L + 4948150 4948232 3'utr betaggt-I FlyBase G1382.1 GATTCTAGCTTACTTTCTGGTTTACATGTATTTTAATGCAAAAAGCTCGAGCTTTTGGAGAGAGAGATGAATAAGTTAGTATG 26 4948205 0.981302468 11 22 188 0.875 1.243038049 0.225 0.346153846 0.575 26 4 1 35 2L:4948150-4948232 6 27.5 757 FBgn0015000 534.58 37.06666667 56.91333333 0.051442254 0.741906475 0.483190816 -5 -6 -5.5 0.01 dme-miR-282-5p 6mer2-7 GAGGCT 2L 4948347 4948352 - 2L_4948347_4948352_- 1 1 1 0 jet FBtr0110896|FBtr0079057 4948204|4948204 4948393|4948587 2L - 4948275 4948444 stop_codon jet FlyBase G7611.1 ATGGGCTACATGCCAACTGTGCAACATCACCGCCTGTTCCTGCAGGTTTGAGATTAATTCTGATTCCGGGCCAATATTACCAATGTACCAAGGAGGCTTTCGAGGCTATCCAATACTTTTGCTGTAAATACATGCCTCAGCATGGGACGCTTTAATTTACTTTTAAGCTT 148 4948361 0.823037626 23 147 876 0.994565217 2.26245109 0.032608696 0.189189189 0.347826087 148 1 0 183 2L:4948275-4948444 6 jet FBtr0079057 4948204 4948587 GAGGCT 6mer2-7 dme-miR-282-5p 2L - 4948330 4948414 stop_codon jet FlyBase G5916.2 CGCCTGTTCCTGCAGGTTTGAGATTAATTCTGATTCCGGGCCAATATTACCAATGTACCAAGGAGGCTTTCGAGGCTATCCAATA 91 4948361 0.814623409 9 86 502 0.967479675 1.774516966 0.016260163 0.274725275 0.463414634 91 3 1 119 2L:4948330-4948414 6 59.5 758 FBgn0031652 30.83333333 2.966666667 4.63 1.92972973 20.05617978 12.85097192 9 9 9 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2L 4975378 4975384 - 2L_4975378_4975384_- 0.521223855 0.521223855 0.521223855 0 Gmd FBtr0079049 4975298 4975578 2L - 4975371 4975400 3'utr Gmd FlyBase G7634.1 ACGTTCATGTTCAGTGTGTGATTCTACTTG 8 4975385 0.720897976 4 8 71 1 1.041392685 0.181818182 0.25 0.454545455 8 0 0 11 2L:4975371-4975400 7 Gmd FBtr0079049 4975298 4975578 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 4975358 4975394 3'utr Gmd FlyBase G5933.1 ATGTTCAGTGTGTGATTCTACTTGTTTTTATACAGTA 6 4975386 0.985209722 4 6 49 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 2L:4975358-4975394 7 7 759 FBgn0031661 247.5733333 19.21 29.15 0.028274451 0.364393545 0.240137221 1 2 1.5 0.01 dme-miR-304-5p 6mer2-7 GAGATT 2L 4978464 4978469 + 2L_4978464_4978469_+ 1 1 1 0 CG3792 FBtr0078997 4978417 4978567 2L + 4978439 4978539 3'utr CG3792 FlyBase G1791.1 AAAAGTAGAAACAGATATACATAGAGAGATTTGAACTCGAAACATAGGTTGCAACAACTTCTCGACAATGTAGAACAAATATGCGATGTTTAAATAATTGA 192 4978469 0.888242519 14 188 954 0.98206278 1.738384124 0.058295964 0.140625 0.260089686 192 1 3 219 2L:4978439-4978539 6 CG3792 FBtr0078997 4978417 4978567 GAGATT 6mer2-7 dme-miR-304-5p 2L + 4978439 4978504 3'utr CG3792 FlyBase G1408.1 AAAAGTAGAAACAGATATACATAGAGAGATTTGAACTCGAAACATAGGTTGCAACAACTTCTCGAC 88 4978469 0.697007991 7 85 384 0.97080292 1.646730386 0.051094891 0.409090909 0.620437956 88 2 2 133 2L:4978439-4978504 6 109 760 FBgn0031662 187.28 19.3 29.44333333 0.582016232 5.647668394 3.702026492 -5 -5 -5 0.01 dme-miR-33-5p 6mer3-8 CAATGC 2L 4991633 4991638 + 2L_4991633_4991638_+ 1 1 1 0 CG34126 FBtr0329977|FBtr0329976|FBtr0329974|FBtr0290010 4991610|4991597|4991610|4991610 4992435|4992435|4992702|4992435 2L + 4991605 4991645 stop_codon CG34126 FlyBase G1809.1 TAGGTAGCACAACTGCATGGACTGCATACAATGCTGCGGCG 11 4991622 0.869895551 2 11 51 1 1.176091259 0.4 0.363636364 0.533333333 11 0 0 15 2L:4991605-4991645 6 CG34126 FBtr0329974|FBtr0329976|FBtr0329977|FBtr0290010 4991610|4991597|4991610|4991610 4992702|4992435|4992435|4992435 CAATGC 6mer3-8 dme-miR-33-5p 2L + 4991605 4991646 stop_codon CG34126 FlyBase G1421.1 TAGGTAGCACAACTGCATGGACTGCATACAATGCTGCGGCGA 10 4991622 0.850221556 2 8 40 0.857142857 1.079181246 0.357142857 0.444444444 0.642857143 9 2 0 12 2L:4991605-4991646 6 6.5 761 FBgn0083962 1546.97 31.44666667 48.27666667 0.004201762 0.206699173 0.134640613 11 11 11 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2L 4992149 4992155 + 2L_4992149_4992155_+ 0.521223842 0.521223852 0.521223847 7.07E-08 CG34126 FBtr0329975|FBtr0329977|FBtr0329976|FBtr0329974|FBtr0290010 4991661|4991610|4991597|4991610|4991610 4992702|4992435|4992435|4992702|4992435 2L + 4992115 4992224 3'utr CG34126 FlyBase G1812.1 ACCAATTCCACTAAGATTGGATAGGACATATTGTTGTGATTCATGATCATATCAAAACTGAATTCTAGAAGCTCTATGCATTGCTGTTGTAATCGTGTGCTAACCAAATA 29 4992147 0.986850387 16 26 224 0.911764706 1.491361694 0.147058824 0.172413793 0.294117647 29 3 0 31 2L:4992115-4992224 7 CG34126 FBtr0329974|FBtr0329976|FBtr0329977|FBtr0329975|FBtr0290010 4991610|4991597|4991610|4991661|4991610 4992702|4992435|4992435|4992702|4992435 TGTGATT 7mer-m1 dme-miR-308-3p 2L + 4992111 4992230 3'utr CG34126 FlyBase G1425.1 TAAAACCAATTCCACTAAGATTGGATAGGACATATTGTTGTGATTCATGATCATATCAAAACTGAATTCTAGAAGCTCTATGCATTGCTGTTGTAATCGTGTGCTAACCAAATATTTGGC 36 4992148 0.775562654 19 33 286 0.862745098 1.342422681 0.176470588 0.333333333 0.529411765 36 6 1 44 2L:4992111-4992230 7 14 762 FBgn0083962 1546.97 31.44666667 48.27666667 0.009049949 0.445198219 0.289995167 2 1 1.5 0.01 dme-miR-79-3p 6mer2-7 AGCTTT 2L 4993806 4993811 - 2L_4993806_4993811_- 1 1 1 0 Rtnl1 FBtr0079039|FBtr0079043|FBtr0079040|FBtr0079038|FBtr0079044|FBtr0079042|FBtr0332413|FBtr0301539|FBtr0301540 4993639|4993639|4993639|4993639|4992806|4993639|4993639|4993639|4992806 4994207|4994207|4994207|4994207|4994207|4994207|4994207|4994207|4994207 2L - 4993773 4993820 3'utr Rtnl1 FlyBase G7654.1 GATTTATTCAGCTTTCTTAGTTTTCATGTGACCCTTTTTAAATTAATT 7 4993813 0.995863691 6 6 81 0.857142857 0.77815125 0.285714286 0 0 7 1 0 6 2L:4993773-4993820 6 Rtnl1 FBtr0301540|FBtr0301539|FBtr0332413|FBtr0079042|FBtr0079044|FBtr0079038|FBtr0079040|FBtr0079043|FBtr0079039 4992806|4993639|4993639|4993639|4992806|4993639|4993639|4993639|4993639 4994207|4994207|4994207|4994207|4994207|4994207|4994207|4994207|4994207 AGCTTT 6mer2-7 dme-miR-79-3p 2L - 4993773 4993822 3'utr Rtnl1 FlyBase G5948.1 TCGATTTATTCAGCTTTCTTAGTTTTCATGTGACCCTTTTTAAATTAATT 10 4993813 0.9938489 7 10 115 1 1.176091259 0.266666667 0.3 0.533333333 10 0 0 15 2L:4993773-4993822 6 6.5 763 FBgn0053113 2720.043333 137.31 210.0133333 0.002389668 0.04733814 0.030950416 2 2 2 0.01 dme-miR-282-5p 6mer2-7 GAGGCT 2L 5010334 5010339 - 2L_5010334_5010339_- 1 1 1 0 Tfb5 FBtr0301130 5009929 5010486 2L - 5010315 5010362 3'utr Tfb5 FlyBase G7669.1 AGCGGCGTGCCCGCAAAGCCTTGGAGGCTCTGGAGCAGGACAACTACC 6 5010341 0.931640874 2 6 21 1 0.77815125 0.333333333 0 0 6 0 0 6 2L:5010315-5010362 6 Tfb5 FBtr0301130 5009929 5010486 GAGGCT 6mer2-7 dme-miR-282-5p 2L - 5010322 5010362 3'utr Tfb5 FlyBase G5954.1 AGCGGCGTGCCCGCAAAGCCTTGGAGGCTCTGGAGCAGGAC 5 5010341 0.747334656 2 5 14 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 2L:5010322-5010362 6 5 764 FBgn0265968 206.6566667 30.92333333 47.31 0.024194719 0.161690202 0.105685902 2 2 2 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT 2L 5011996 5012001 + 2L_5011996_5012001_+ 1 1 1 0 CG3887 FBtr0332412|FBtr0079000|FBtr0332411 5011861|5011861|5011861 5012127|5012127|5012127 2L + 5011958 5012034 3'utr CG3887 FlyBase G1817.1 AACTTAAACATAAGCTCTTGTCCCGACATTATCCACTTAGCTGTATTTCTGTTTTCACCCCAACTATAGCCTACTCT 16 5012004 0.991313207 7 14 145 0.9 1.255272505 0.05 0.1875 0.35 16 2 0 18 2L:5011958-5012034 6 CG3887 FBtr0332411|FBtr0332412|FBtr0079000 5011861|5011861|5011861 5012127|5012127|5012127 AGCTGT 6mer3-8 dme-miR-1008-3p 2L + 5011960 5012021 3'utr CG3887 FlyBase G1427.1 CTTAAACATAAGCTCTTGTCCCGACATTATCCACTTAGCTGTATTTCTGTTTTCACCCCAAC 6 5012004 0.98220162 4 5 42 1 0.903089987 0.25 0.333333333 0.5 6 0 0 8 2L:5011960-5012021 6 6.5 765 FBgn0031670 479.6666667 65.39 99.91 0.013551077 0.099403579 0.065058553 -8 -8 -8 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 2L 5047718 5047724 + 2L_5047718_5047724_+ 0.620204266 0.620204266 0.620204266 0 CG44000 FBtr0334121|FBtr0334123|FBtr0334120|FBtr0334119|FBtr0334122 5046974|5046974|5046974|5046974|5046974 5048365|5048365|5048365|5048365|5048365 2L + 5047682 5047744 3'utr CG44000 FlyBase G1844.1 AACACTTAAGCTGGTCAAGGATAAAAAGGACAAAATTGCATTTGAGTACATCATGGAGAACGC 75 5047717 0.915481584 4 69 384 0.917525773 1.648360011 0.288659794 0.173333333 0.360824742 75 7 1 89 2L:5047682-5047744 7 CG44000 FBtr0334121|FBtr0334122|FBtr0334119|FBtr0334120|FBtr0334123 5046974|5046974|5046974|5046974|5046974 5048365|5048365|5048365|5048365|5048365 TGCATTT 7mer-m8 dme-miR-277-3p 2L + 5047686 5047744 3'utr CG44000 FlyBase G1463.1 CTTAAGCTGGTCAAGGATAAAAAGGACAAAATTGCATTTGAGTACATCATGGAGAACGC 54 5047717 0.962872234 5 54 275 1 1.913813852 0.243902439 0.351851852 0.573170732 54 0 0 82 2L:5047686-5047744 7 61 766 FBgn0264742 443.39 23.51666667 36.15 0.1375764 2.593905032 1.687413555 1 1 1 0.01 dme-miR-277-3p 6mer3-8 TGCATT 2L 5047926 5047931 + 2L_5047926_5047931_+ 0.999999051 1 0.999999526 6.36E-07 CG44000 FBtr0334121|FBtr0334123|FBtr0334120|FBtr0334119|FBtr0334122 5046974|5046974|5046974|5046974|5046974 5048365|5048365|5048365|5048365|5048365 2L + 5047856 5048010 3'utr CG44000 FlyBase G1845.1 GTTTTCTATAAAATTGCACCCGATATCGTTGTAAAATCCTACTTAGAAATTGCATACGTCCTTATTTGTTTGCATTGTGTGCGAGATCGATTGTATATGGGAAAAGTAATCTTAACGTTTGCGTAGTCAAATTAACATAGTGGATACATACATCG 29 5047917 0.989679387 15 23 216 0.810810811 1.477121255 0.135135135 0.172413793 0.351351351 29 7 0 30 2L:5047856-5048010 6 CG44000 FBtr0334121|FBtr0334122|FBtr0334119|FBtr0334120|FBtr0334123 5046974|5046974|5046974|5046974|5046974 5048365|5048365|5048365|5048365|5048365 TGCATT 6mer3-8 dme-miR-277-3p 2L + 5047896 5047979 3'utr CG44000 FlyBase G1464.1 ACTTAGAAATTGCATACGTCCTTATTTGTTTGCATTGTGTGCGAGATCGATTGTATATGGGAAAAGTAATCTTAACGTTTGCGT 20 5047917 0.727463908 7 18 148 0.923076923 1.380211242 0.346153846 0.3 0.461538462 20 2 0 24 2L:5047896-5047979 6 4 767 FBgn0264742 443.39 23.51666667 36.15 0.009021403 0.170092133 0.110650069 9 9 9 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT 2L 5055818 5055823 + 2L_5055818_5055823_+ 1 1 1 0 His3.3A FBtr0079010|FBtr0333537|FBtr0333536 5055758|5055758|5055758 5055995|5055995|5056149 2L + 5055761 5055851 3'utr His3.3A FlyBase G1858.1 TGCCCATGACCGCCATCTTGGATTGGAAAAGCAGTGGCGGCAAAACTACCAACCCACAGCTGTCGCTTGGAGGGGGGAACTCGGAGCTAGA 34 5055827 0.704302051 9 33 119 0.975 1.591064607 0.325 0.176470588 0.3 34 1 0 39 2L:5055761-5055851 6 His3.3A FBtr0333536|FBtr0333537|FBtr0079010 5055758|5055758|5055758 5056149|5055995|5055995 AGCTGT 6mer3-8 dme-miR-1008-3p 2L + 5055767 5055848 3'utr His3.3A FlyBase G1477.1 TGACCGCCATCTTGGATTGGAAAAGCAGTGGCGGCAAAACTACCAACCCACAGCTGTCGCTTGGAGGGGGGAACTCGGAGCT 21 5055828 0.898869015 7 20 75 0.931034483 1.431363764 0.482758621 0.285714286 0.482758621 21 2 0 27 2L:5055767-5055848 6 17.5 768 FBgn0014857 1249.59 205.6366667 313.4066667 0.014004594 0.085101555 0.055837995 -9 -10 -9.5 0.01 dme-miR-92b-3p 8mer-m1 GTGCAATT 2L 5072544 5072551 - 2L_5072544_5072551_- 0.596698356 0.596698356 0.596698356 0 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 2L - 5072517 5072647 3'utr pgant5 FlyBase G7737.1 ATTTTTAAAATCGATTATGTGTGACGAACCCATAGTTATAGAGAAACGACGATATATACACATACGGCAAAATAGCAACTATTTTAACTGGTGACGGTGCAATTTTTAATTAACATTTAAAATGAAACAGG 19 5072575 0.97653 11 18 121 0.947368421 1.255272505 0.105263158 0 0 19 1 0 18 2L:5072517-5072647 8 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 GTGCAATT 8mer-m1 dme-miR-92b-3p 2L - 5072534 5072605 3'utr pgant5 FlyBase G6028.1 GAAACGACGATATATACACATACGGCAAAATAGCAACTATTTTAACTGGTGACGGTGCAATTTTTAATTAAC 11 5072545 0.979459481 7 9 64 0.833333333 1.176091259 0.166666667 0.454545455 0.666666667 11 3 0 15 2L:5072534-5072605 8 4.5 769 FBgn0031681 2245.746667 62.23 95.52 0.002003788 0.07231239 0.047110553 24 -6 9 0.01 dme-miR-277-3p 8mer-A1 TGCATTTA 2L 5072906 5072913 - 2L_5072906_5072913_- 0.625364269 0.625364269 0.625364269 0 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 2L - 5072884 5073118 3'utr pgant5 FlyBase G7740.1 AAAGAAAAAAAAATCTCTCAAAATTGCACGCATATCATAAATACAGTGTAAAAATATATATATAAGCTACATTCAAACGAGAACTAAACAAAAACAATGTAAATATGATTAATGTAGCTATTAAAAATATACATTTAAATAAAATATCTATGTAGTACCTATATGATATACACATATGCAAAGCAAGCAAAACTGTACTATAAATTGCATTTAGTTCTAGGCTTAACGTTAAGTT 55 5072914 0.988669298 20 47 441 0.867647059 1.770852012 0.058823529 0.218181818 0.367647059 55 9 0 59 2L:5072884-5073118 8 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 TGCATTTA 8mer-A1 dme-miR-277-3p 2L - 5072888 5072978 3'utr pgant5 FlyBase G6029.1 AAAATATCTATGTAGTACCTATATGATATACACATATGCAAAGCAAGCAAAACTGTACTATAAATTGCATTTAGTTCTAGGCTTAACGTTA 22 5072914 0.930655179 7 22 178 1 1.531478917 0 0.409090909 0.617647059 22 0 0 34 2L:5072888-5072978 8 22.5 770 FBgn0031681 2245.746667 62.23 95.52 0.01001894 0.361561948 0.235552764 1 1 1 0.01 dme-miR-252-5p 6mer3-8 GTACTT 2L 5073313 5073318 - 2L_5073313_5073318_- 1 1 1 0 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 2L - 5073267 5073338 3'utr pgant5 FlyBase G7742.2 TGACATTCCTAGCTAGAATTGTACTTGAGAAAATTTACGTTTGTTTTGTTTTAATTTTACCTTAAGTCACTT 18 5073304 0.797940764 5 15 140 0.952380952 1 0.142857143 0.111111111 0.238095238 18 0 1 20 2L:5073267-5073338 6 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 GTACTT 6mer3-8 dme-miR-252-5p 2L - 5073291 5073329 3'utr pgant5 FlyBase G6030.1 TAGCTAGAATTGTACTTGAGAAAATTTACGTTTGTTTTG 9 5073304 0.693871085 4 7 70 0.894736842 1.230448921 0.578947368 0.666666667 0.842105263 9 2 0 17 2L:5073291-5073329 6 7 771 FBgn0031681 2245.746667 62.23 95.52 0.003117003 0.112485939 0.073283082 -14 -14 -14 0.01 dme-miR-277-3p 7mer-A1 GCATTTA 2L 5073486 5073492 - 2L_5073486_5073492_- 0.823349562 0.823349562 0.823349562 0 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 2L - 5073470 5073514 3'utr pgant5 FlyBase G7744.2 TCGACCAAGTACCAATAAATTGGCATTTAACTGACGTTTTGTGCT 38 5073494 0.766249955 6 36 262 0.934782609 1.633468456 0.152173913 0.210526316 0.347826087 38 3 0 43 2L:5073470-5073514 7 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 GCATTTA 7mer-A1 dme-miR-277-3p 2L - 5073470 5073518 3'utr pgant5 FlyBase G6031.1 AGCTTCGACCAAGTACCAATAAATTGGCATTTAACTGACGTTTTGTGCT 30 5073494 0.809947269 4 29 212 1 1.653212514 0 0.266666667 0.511111111 30 0 0 45 2L:5073470-5073518 7 30 772 FBgn0031681 2245.746667 62.23 95.52 0.013358586 0.482082597 0.314070352 2 2 2 0.01 dme-miR-7-5p 7mer-m8 GTCTTCC 2L 5073648 5073654 - 2L_5073648_5073654_- 0.705950313 0.705950313 0.705950313 0 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 2L - 5073602 5073846 3'utr pgant5 FlyBase G7746.1 TAAATACAACTCAACTCAACGGATCCTACTAACTATACTGAGAACTTCCAATTTATGTTTAATCCTAGCCGGCTCCTGTTTTCGACGTTTATGTAGCCTAAGTTCAAGCGGATTCAATATCCCTCTCTCTCTCTCTATCTTTGTGTGCGTGAATGTGTGTAGGCGGCCGGAGGAGTCCTTCGGCAGCAGGATGTCTTCCCAAAATCTTGATGCGCGTGTGTGAATGTATAGATCTGTTTACATGA 125 5073655 0.906079959 33 118 741 0.944827586 2.136720567 0.172413793 0.136 0.255172414 125 8 0 137 2L:5073602-5073846 7 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 GTCTTCC 7mer-m8 dme-miR-7-5p 2L - 5073579 5073686 3'utr pgant5 FlyBase G6032.1 AGGCGGCCGGAGGAGTCCTTCGGCAGCAGGATGTCTTCCCAAAATCTTGATGCGCGTGTGTGAATGTATAGATCTGTTTACATGATGTGCATGTATATGTGTTTATAT 44 5073655 0.893766348 13 42 264 0.961538462 1.875061263 0.243589744 0.590909091 0.769230769 44 3 0 75 2L:5073579-5073686 7 46 773 FBgn0031681 2245.746667 62.23 95.52 0.020483165 0.739193315 0.481574539 1 1 1 0.01 dme-miR-304-5p 7mer-m8 TGAGATT 2L 5095329 5095335 + 2L_5095329_5095335_+ 0.619289039 0.620202451 0.619745745 0.000645942 CG5828 FBtr0079018|FBtr0329981 5095190|5095190 5095439|5095910 2L + 5095254 5095387 3'utr CG5828 FlyBase G1873.1 GTTCAGTTTGAAATCATTGTTACCGCCACCCAAAACCCACAACCCCCTAAACAATCCCATCCCTCAATCTACCGATGAGATTCATATGTGTATAAATGTAATCTTAATGCAAGTGCTTTCGTGGTCACCCCACC 56 5095329 0.967136086 11 48 355 0.835820896 1.447158031 0.134328358 0.125 0.268656716 56 10 1 56 2L:5095254-5095387 7 CG5828 FBtr0079018|FBtr0329981 5095190|5095190 5095439|5095910 TGAGATT 7mer-m8 dme-miR-304-5p 2L + 5095307 5095389 3'utr CG5828 FlyBase G1491.1 ATCCCATCCCTCAATCTACCGATGAGATTCATATGTGTATAAATGTAATCTTAATGCAAGTGCTTTCGTGGTCACCCCACCCA 29 5095329 0.929161795 5 27 208 0.897435897 1.544068044 0.128205128 0.24137931 0.435897436 29 4 0 35 2L:5095307-5095389 7 25 774 FBgn0031682 105 9.143333333 14.06333333 0.238095238 2.734232592 1.777672434 0 0 0 0.01 dme-bantam-3p 6mer2-7 GATCTC 2L 5098422 5098427 + 2L_5098422_5098427_+ 1 1 1 0 CG4230 FBtr0329982|FBtr0079019 5098383|5098383 5099294|5098613 2L + 5098412 5098500 3'utr CG4230 FlyBase G1876.1 CAAGATAAGCGATCTCTGCTGCAGCAACAGAAACAACAGCAACAGTACGAAGATAGGCTAAAGCGATTCGTCGGCAACATAGTCCCGCA 58 5098428 0.941757226 5 55 226 0.972222222 1.544068044 0.111111111 0.189655172 0.347222222 58 1 1 70 2L:5098412-5098500 6 CG4230 FBtr0079019|FBtr0329982 5098383|5098383 5098613|5099294 GATCTC 6mer2-7 dme-bantam-3p 2L + 5098412 5098440 3'utr CG4230 FlyBase G1493.1 CAAGATAAGCGATCTCTGCTGCAGCAACA 40 5098428 0.689350808 2 39 160 0.982142857 1.740362689 0.160714286 0.35 0.535714286 40 1 0 55 2L:5098412-5098440 6 46.5 775 FBgn0031683 131.3333333 7.34 11.27 0.354060914 6.335149864 4.125998225 -6 -6 -6 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 2L 5099541 5099546 - 2L_5099541_5099546_- 1 1 1 0 CG8680 FBtr0345334|FBtr0345333|FBtr0079025 5099498|5099175|5099498 5099601|5099601|5099601 2L - 5099507 5099564 3'utr CG8680 FlyBase G7764.1 CTTTCTATCCTGTTGCGCTAGCTTGAACTAAACTAAACTAAATAAAATTAGAACACCA 7 5099541 0.987667761 5 7 53 1 0.903089987 0 0.142857143 0.25 7 0 0 8 2L:5099507-5099564 6 CG8680 FBtr0345333|FBtr0079025|FBtr0345334 5099175|5099498|5099498 5099601|5099601|5099601 TAGCTT 6mer3-8 dme-miR-79-3p 2L - 5099499 5099575 3'utr CG8680 FlyBase G6044.1 AGCTAAAACACCTTTCTATCCTGTTGCGCTAGCTTGAACTAAACTAAACTAAATAAAATTAGAACACCAAAAAGCTA 7 5099562 0.984748284 6 7 52 1 1.079181246 0 0.571428571 0.75 7 0 0 12 2L:5099499-5099575 6 5 776 FBgn0031684 213 43.71 66.32666667 0.023474178 0.1143903 0.075384461 -5 16 5.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 2L 5186355 5186361 + 2L_5186355_5186361_+ 0.82334494 0.823349562 0.823347251 3.32E-06 Msp300 FBtr0303384 5186161 5186528 2L + 5186320 5186376 3'utr Msp300 FlyBase G1951.1 AAACGCATCCAATAGGCTTATGTTTTGAGTTTGTATACCTGAACGAAAAAGTTACTA 17 5186353 0.979338163 8 16 113 0.958333333 1.361727836 0.083333333 0.235294118 0.458333333 17 1 0 23 2L:5186320-5186376 7 Msp300 FBtr0303384 5186161 5186528 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2L + 5186323 5186370 3'utr Msp300 FlyBase G1537.1 CGCATCCAATAGGCTTATGTTTTGAGTTTGTATACCTGAACGAAAAAG 8 5186353 0.974249724 5 8 50 1 1.113943352 0.153846154 0.5 0.692307692 8 0 0 13 2L:5186323-5186370 7 9.5 777 FBgn0261836 15716.32333 95.7 146.9 0.000604467 0.099268548 0.064669843 2 2 2 0.01 dme-miR-968-5p 6mer3-8 ACTACT 2L 5186487 5186492 + 2L_5186487_5186492_+ 1 0.999999897 0.999999949 7.07E-08 Msp300 FBtr0303384 5186161 5186528 2L + 5186404 5186507 3'utr Msp300 FlyBase G1952.1 CGTAACCCAAATATGTAGATTTGTTGTAACTTAGTTCCTTTTACTAATTGATATTAACCTTTGTAAAAGCCCAGTAATCAGAGACTACTAATGGTAGTGATAAT 28 5186480 0.833060636 15 27 213 1 1.531478917 0.147058824 0.214285714 0.352941176 28 0 0 34 2L:5186404-5186507 6 Msp300 FBtr0303384 5186161 5186528 ACTACT 6mer3-8 dme-miR-968-5p 2L + 5186407 5186494 3'utr Msp300 FlyBase G1538.1 AACCCAAATATGTAGATTTGTTGTAACTTAGTTCCTTTTACTAATTGATATTAACCTTTGTAAAAGCCCAGTAATCAGAGACTACTAA 12 5186480 0.97896973 10 11 88 1 1.255272505 0.277777778 0.416666667 0.611111111 12 0 0 18 2L:5186407-5186494 6 8 778 FBgn0261836 15716.32333 95.7 146.9 0.000509025 0.083594566 0.054458816 7 7 7 0.01 dme-miR-980-5p 7mer-m1 AAAAACT 2L 5205844 5205850 + 2L_5205844_5205850_+ 0.765586663 0.765586663 0.765586663 0 Msp300 FBtr0303388|FBtr0303385|FBtr0303387|FBtr0332405 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 2L + 5205828 5205871 3'utr Msp300 FlyBase G2009.1 ACGTATATGATCCCAAAAAAACTATAGAGAACCCAAACATTTTG 8 5205834 0.933032584 5 7 25 0.9 0.954242509 0.1 0.125 0.3 8 1 0 9 2L:5205828-5205871 7 Msp300 FBtr0332405|FBtr0303385|FBtr0303387|FBtr0303388 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 AAAAACT 7mer-m1 dme-miR-980-5p 2L + 5205797 5205851 3'utr Msp300 FlyBase G1587.1 CAGCAAACAATTTATATATTCATATATACCCACGTATATGATCCCAAAAAAACTA 8 5205835 0.975254642 7 7 50 0.923076923 1.079181246 0 0.5 0.692307692 8 1 0 12 2L:5205797-5205851 7 6 779 FBgn0261836 15716.32333 95.7 146.9 0.000381769 0.062695925 0.040844112 10 9 9.5 0.01 dme-bantam-3p 8mer-A1 TGATCTCA 2L 5206021 5206028 + 2L_5206021_5206028_+ 0.631136385 0.631136385 0.631136385 0 Msp300 FBtr0303388|FBtr0303385|FBtr0303387|FBtr0332405 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 2L + 5206011 5206052 3'utr Msp300 FlyBase G2011.1 TCGCAGGATATGATCTCAAGTTCCTGCTGCCAGCGATGGGCT 9 5206020 0.96282156 5 9 49 1 1.113943352 0.153846154 0.333333333 0.538461538 9 0 0 13 2L:5206011-5206052 8 Msp300 FBtr0332405|FBtr0303385|FBtr0303387|FBtr0303388 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 TGATCTCA 8mer-A1 dme-bantam-3p 2L + 5205999 5206056 3'utr Msp300 FlyBase G1589.1 CGTGGAACATTTTCGCAGGATATGATCTCAAGTTCCTGCTGCCAGCGATGGGCTAGAA 13 5206019 0.84509398 8 13 77 1 1.146128036 0.5 0.076923077 0.142857143 13 0 0 14 2L:5205999-5206056 8 10.5 780 FBgn0261836 15716.32333 95.7 146.9 0.000668095 0.109717868 0.071477195 1 2 1.5 0.01 dme-miR-12-5p 7mer-A1 ATACTCA 2L 5206385 5206391 + 2L_5206385_5206391_+ 0.823349562 0.823349562 0.823349562 0 Msp300 FBtr0303388|FBtr0303385|FBtr0303387|FBtr0332405 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 2L + 5206368 5206419 3'utr Msp300 FlyBase G2016.1 CATTTCAAGCATTCCTGATACTCATTTCCAAATTACCAATAGACATTGACCA 48 5206382 0.981900934 5 46 343 0.983870968 1.785329835 0 0.229166667 0.403225806 48 1 0 61 2L:5206368-5206419 7 Msp300 FBtr0332405|FBtr0303385|FBtr0303387|FBtr0303388 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 ATACTCA 7mer-A1 dme-miR-12-5p 2L + 5206369 5206432 3'utr Msp300 FlyBase G1594.1 ATTTCAAGCATTCCTGATACTCATTTCCAAATTACCAATAGACATTGACCATCGAAGCCAGCTC 37 5206382 0.987366102 7 29 263 0.804347826 0.966141733 0.065217391 0.189189189 0.347826087 37 6 3 37 2L:5206369-5206432 7 40.5 781 FBgn0261836 15716.32333 95.7 146.9 0.002576939 0.423197492 0.275697754 3 3 3 0.01 "dme-miR-995-3p,dme-miR-998-3p" 7mer-A1 GGTGCTA 2L 5206502 5206508 + 2L_5206502_5206508_+ 0.823349562 0.823349562 0.823349562 0 Msp300 FBtr0303388|FBtr0303385|FBtr0303387|FBtr0332405 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 2L + 5206482 5206526 3'utr Msp300 FlyBase G2018.1 CGAAGCAAGTGTCCTATGCCGGTGCTAAACCAACCTACAAATTTT 12 5206498 0.75712565 3 12 64 1 1.146128036 0 0.166666667 0.285714286 12 0 0 14 2L:5206482-5206526 7 Msp300 FBtr0332405|FBtr0303385|FBtr0303387|FBtr0303388 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 GGTGCTA 7mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 2L + 5206478 5206513 3'utr Msp300 FlyBase G1595.1 AAAACGAAGCAAGTGTCCTATGCCGGTGCTAAACCA 7 5206498 0.948153779 2 7 32 1 1.041392685 0.181818182 0.428571429 0.636363636 7 0 0 11 2L:5206478-5206513 7 9 782 FBgn0261836 15716.32333 95.7 146.9 0.000572653 0.094043887 0.061266167 4 4 4 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 5206966 5206971 + 2L_5206966_5206971_+ 1 1 1 0 Msp300 FBtr0303388|FBtr0303385|FBtr0303387|FBtr0332405 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 2L + 5206929 5206996 3'utr Msp300 FlyBase G2019.3 ATGTAGCATTTTAAGATTTCCTTTCTTGTGAACAACTGTACCTTTATATGCATTATGATTATTAAAAA 755 5206965 0.851126469 20 736 5897 0.982824427 2.167739185 0.055343511 0.274172185 0.477099237 755 12 6 1030 2L:5206929-5206996 6 Msp300 FBtr0332405|FBtr0303385|FBtr0303387|FBtr0303388 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 5206929 5206996 3'utr Msp300 FlyBase G1599.2 ATGTAGCATTTTAAGATTTCCTTTCTTGTGAACAACTGTACCTTTATATGCATTATGATTATTAAAAA 587 5206965 0.849661248 17 574 4508 0.982121573 2.915927212 0.063170441 0.313458262 0.519666269 587 15 0 824 2L:5206929-5206996 6 599 783 FBgn0261836 15716.32333 95.7 146.9 0.03811324 6.259143156 4.077603812 1 1 1 0.01 dme-miR-12-5p 6mer3-8 AATACT 2L 5219248 5219253 - 2L_5219248_5219253_- 1 1 1 0 tkv FBtr0079088|FBtr0079086|FBtr0079087|FBtr0079089 5218998|5218998|5218998|5218998 5220092|5220092|5220092|5220092 2L - 5219197 5219275 3'utr tkv FlyBase G7770.1 TATCGTTATAAGCGATTCTGTAAATACTATATATGTATCTTTATCTGTAACCGTTTAACTTATATCTTATCGTTCTTAT 9 5219260 0.987232071 4 9 91 1 1 0.4 0.111111111 0.2 9 0 0 10 2L:5219197-5219275 6 tkv FBtr0079087|FBtr0079089|FBtr0079088|FBtr0079086 5218998|5218998|5218998|5218998 5220092|5220092|5220092|5220092 AATACT 6mer3-8 dme-miR-12-5p 2L - 5219241 5219271 3'utr tkv FlyBase G6046.1 GTTATAAGCGATTCTGTAAATACTATATATG 5 5219260 0.745489432 2 4 35 0.75 0.77815125 0.125 0.4 0.625 5 2 0 6 2L:5219241-5219271 6 5 784 FBgn0003716 310.6566667 12.88 19.87333333 0.016094939 0.388198758 0.251593425 7 7 7 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA 2L 5219535 5219540 - 2L_5219535_5219540_- 1 1 1 0 tkv FBtr0079088|FBtr0079086|FBtr0079087|FBtr0079089 5218998|5218998|5218998|5218998 5220092|5220092|5220092|5220092 2L - 5219488 5219601 3'utr tkv FlyBase G7773.1 AGAACATGTCCTTATATGTTTTGTTTGTATCTAGTGTTTAAGTGTAAACTTTGCAGACTTTGTGCAAGTAAATGCTGCCTTTTGTAAAATCCACGGAATTAGTTGCCTTAAGAC 42 5219521 0.987873475 14 37 330 0.894736842 1.008600172 0.298245614 0.285714286 0.473684211 42 2 4 51 2L:5219488-5219601 6 tkv FBtr0079087|FBtr0079089|FBtr0079088|FBtr0079086 5218998|5218998|5218998|5218998 5220092|5220092|5220092|5220092 GTGCAA 6mer3-8 dme-miR-92b-3p 2L - 5219509 5219573 3'utr tkv FlyBase G6049.1 ATCTAGTGTTTAAGTGTAAACTTTGCAGACTTTGTGCAAGTAAATGCTGCCTTTTGTAAAATCCA 19 5219522 0.686550624 8 18 164 0.92 1.361727836 0.32 0.263157895 0.44 19 2 0 23 2L:5219509-5219573 6 24.5 785 FBgn0003716 310.6566667 12.88 19.87333333 0.0788652 1.902173913 1.232807783 -19 -18 -18.5 0.01 dme-miR-965-3p 7mer-m8 TACGCTT 2L 5219658 5219664 - 2L_5219658_5219664_- 0.620204855 0.620204855 0.620204855 0 tkv FBtr0079088|FBtr0079086|FBtr0079087|FBtr0079089 5218998|5218998|5218998|5218998 5220092|5220092|5220092|5220092 2L - 5219651 5219678 3'utr tkv FlyBase G7774.1 TGTGCCAGCTTTTGTACGCTTTAACTAA 11 5219665 0.663212313 5 10 91 0.909090909 1 0.272727273 0 0 11 1 0 10 2L:5219651-5219678 7 tkv FBtr0079087|FBtr0079089|FBtr0079088|FBtr0079086 5218998|5218998|5218998|5218998 5220092|5220092|5220092|5220092 TACGCTT 7mer-m8 dme-miR-965-3p 2L - 5219651 5219676 3'utr tkv FlyBase G6050.1 TGCCAGCTTTTGTACGCTTTAACTAA 5 5219664 0.629195756 4 5 37 1 0.903089987 0 0.6 0.75 5 0 0 8 2L:5219651-5219676 7 7.5 786 FBgn0003716 310.6566667 12.88 19.87333333 0.024142408 0.582298137 0.377390138 1 0 0.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 5272052 5272057 - 2L_5272052_5272057_- 1 1 1 0 Bsg25D FBtr0079085|FBtr0310625|FBtr0310624|FBtr0302568|FBtr0079084 5271726|5271726|5271726|5271726|5271726 5272677|5272677|5272677|5272677|5272677 2L - 5272032 5272091 3'utr Bsg25D FlyBase G7786.2 TATTGATAGAGAAAATGGAAATGAGCGTAAAAAATGATCTATGATATTGATATTGATGTA 69 5272076 0.940221704 8 66 327 0.951807229 1.897627091 0.493975904 0.144927536 0.289156627 69 4 0 79 2L:5272032-5272091 6 Bsg25D FBtr0302568|FBtr0079084|FBtr0310624|FBtr0310625|FBtr0079085 5271726|5271726|5271726|5271726|5271726 5272677|5272677|5272677|5272677|5272677 TGATCT 6mer3-8 dme-bantam-3p 2L - 5272030 5272100 3'utr Bsg25D FlyBase G6059.1 TGTTAATTTTATTGATAGAGAAAATGGAAATGAGCGTAAAAAATGATCTATGATATTGATATTGATGTAAT 66 5272056 0.959924864 7 64 340 0.989583333 1.977723605 0.416666667 0.363636364 0.5625 66 1 0 95 2L:5272030-5272100 6 40 787 FBgn0000228 499.75 17.04333333 26.20333333 0.08004002 2.346958733 1.526523343 19 -1 9 0.01 dme-miR-1012-3p 7mer-m8 TTGACTA 2L 5272225 5272231 - 2L_5272225_5272231_- 0.631525999 0.615585909 0.623555954 0.011271353 Bsg25D FBtr0079085|FBtr0310625|FBtr0310624|FBtr0302568|FBtr0079084 5271726|5271726|5271726|5271726|5271726 5272677|5272677|5272677|5272677|5272677 2L - 5272212 5272265 3'utr Bsg25D FlyBase G7788.1 GTAGTATATGTTCGTGCAATGTTGACCTTACTAATTGACTACTGAAACAGTTAT 10 5272233 0.95835254 4 9 94 0.909090909 0.698970004 0.272727273 0.1 0.181818182 10 0 1 10 2L:5272212-5272265 7 Bsg25D FBtr0302568|FBtr0079084|FBtr0310624|FBtr0310625|FBtr0079085 5271726|5271726|5271726|5271726|5271726 5272677|5272677|5272677|5272677|5272677 TTGACTA 7mer-m8 dme-miR-1012-3p 2L - 5272145 5272253 3'utr Bsg25D FlyBase G6060.1 CGTGCAATGTTGACCTTACTAATTGACTACTGAAACAGTTATCGTATATTAATTATATTAGAAGAAACAGTATTTTAAATTTGTTATGCGTCTGAGTAGGCGAGCACGT 14 5272231 0.984624945 8 14 113 1 1.278753601 0 0.285714286 0.473684211 14 0 0 19 2L:5272145-5272253 7 5.5 788 FBgn0000228 499.75 17.04333333 26.20333333 0.011005503 0.322706826 0.20989696 2 0 1 0.01 dme-miR-282-5p 7mer-m8 AGAGGCT 2L 5309785 5309791 + 2L_5309785_5309791_+ 0.631524569 0.631524569 0.631524569 0 vri FBtr0079071|FBtr0342936|FBtr0079070|FBtr0346579|FBtr0300020 5309719|5309719|5309719|5309719|5309719 5310996|5310996|5310625|5311223|5310610 2L + 5309614 5309959 stop_codon vri FlyBase G2052.1 AGGAGGCCAATGTGGTAACCAGTGCCGAGCGCGATCAAATGCTCAAGTCGCAGCTGGAGCGCCTAGAGTCCGAGGTGGCCAGCATCAAGATGATCTTGGCGGAGTAAGCAAGCCCCTGTCCAAGCTGGACAGGATCACGACTAGGCGGATCAGGAGAGAGAGCGAAGAGACAGAGGCTCTGAAGGGATCAGAGTCGGGGGAGCAGAGCAGTAGATGGCAAAGCAGAGAGTTCCATGGCGCCAGTAGTTCTCCTGGACAAAGAAGTTGGTTTAAGCATATGTTAGTAGAGATGTCCAAAACCGAGTGATAACTATTAGATACCGATGCATGCATGTCTCCATCTCTA 273 5309801 0.912508195 32 240 828 0.87654321 1.851258349 0.339506173 0.164835165 0.296296296 273 37 3 284 2L:5309614-5309959 7 vri FBtr0346579|FBtr0300020|FBtr0342936|FBtr0079070|FBtr0079071 5309719|5309719|5309719|5309719|5309719 5311223|5310610|5310996|5310625|5310996 AGAGGCT 7mer-m8 dme-miR-282-5p 2L + 5309650 5309956 stop_codon vri FlyBase G1631.1 AAATGCTCAAGTCGCAGCTGGAGCGCCTAGAGTCCGAGGTGGCCAGCATCAAGATGATCTTGGCGGAGTAAGCAAGCCCCTGTCCAAGCTGGACAGGATCACGACTAGGCGGATCAGGAGAGAGAGCGAAGAGACAGAGGCTCTGAAGGGATCAGAGTCGGGGGAGCAGAGCAGTAGATGGCAAAGCAGAGAGTTCCATGGCGCCAGTAGTTCTCCTGGACAAAGAAGTTGGTTTAAGCATATGTTAGTAGAGATGTCCAAAACCGAGTGATAACTATTAGATACCGATGCATGCATGTCTCCATCT 185 5309801 0.90628912 30 158 480 0.869257951 1.691965103 0.35335689 0.372972973 0.590106007 185 33 4 246 2L:5309650-5309956 7 56.5 789 FBgn0016076 178.9966667 5.846666667 8.973333333 0.315648336 9.663625998 6.296433878 -16 -16 -16 0.01 dme-bantam-3p 6mer2-7 GATCTC 2L 5310099 5310104 + 2L_5310099_5310104_+ 1 1 1 0 vri FBtr0079071|FBtr0342936|FBtr0079070|FBtr0346579|FBtr0300020 5309719|5309719|5309719|5309719|5309719 5310996|5310996|5310625|5311223|5310610 2L + 5310045 5310223 3'utr vri FlyBase G2053.1 ATGTTTATCTATCCACTGTATTGAGTCTTGTAATCGTGAATGTTTAACTATATAGATCTCGTCAACTCGGAGCTAAAAAAAAATCCTTAGGGTCAGCCCAAAAGAATTTCTAATTTAACCTGTTTGTTGTATACACACAAGCTATTTGTTTGCATAGCTAGCTGGTGACCTGCGATGAG 122 5310096 0.927326496 32 104 917 0.854304636 1.156347201 0.178807947 0.18852459 0.344370861 122 14 8 129 2L:5310045-5310223 6 vri FBtr0346579|FBtr0300020|FBtr0342936|FBtr0079070|FBtr0079071 5309719|5309719|5309719|5309719|5309719 5311223|5310610|5310996|5310625|5310996 GATCTC 6mer2-7 dme-bantam-3p 2L + 5310036 5310186 3'utr vri FlyBase G1632.1 TCTGTGTGTATGTTTATCTATCCACTGTATTGAGTCTTGTAATCGTGAATGTTTAACTATATAGATCTCGTCAACTCGGAGCTAAAAAAAAATCCTTAGGGTCAGCCCAAAAGAATTTCTAATTTAACCTGTTTGTTGTATACACACAAGC 73 5310106 0.987533168 21 68 605 0.946902655 2.029383778 0.061946903 0.369863014 0.592920354 73 6 0 107 2L:5310036-5310186 6 59.5 790 FBgn0016076 178.9966667 5.846666667 8.973333333 0.332408425 10.17673888 6.630757801 3 -7 -2 0.01 dme-miR-970-3p 7mer-m8 TCTTATG 2L 5310253 5310259 + 2L_5310253_5310259_+ 0.658999343 0.658999343 0.658999343 0 vri FBtr0079071|FBtr0342936|FBtr0079070|FBtr0346579|FBtr0300020 5309719|5309719|5309719|5309719|5309719 5310996|5310996|5310625|5311223|5310610 2L + 5310224 5310359 3'utr vri FlyBase G2054.1 CATCGGGGTCACCAGCCACGTTATTGTTCTCTTATGCATCCCAAGTTTCCTTATGCACAGCGAAAGTGGAGAAGATAAAGAATTATTATGTTTGTAAGCAAACGTTACAAAGTATTTGCTGTTGTACATATTACAC 63 5310247 0.837967263 19 60 538 0.961038961 1.86923172 0.233766234 0.158730159 0.311688312 63 3 0 74 2L:5310224-5310359 7 vri FBtr0346579|FBtr0300020|FBtr0342936|FBtr0079070|FBtr0079071 5309719|5309719|5309719|5309719|5309719 5311223|5310610|5310996|5310625|5310996 TCTTATG 7mer-m8 dme-miR-970-3p 2L + 5310191 5310286 3'utr vri FlyBase G1633.1 TGTTTGCATAGCTAGCTGGTGACCTGCGATGAGCATCGGGGTCACCAGCCACGTTATTGTTCTCTTATGCATCCCAAGTTTCCTTATGCACAGCGA 28 5310256 0.895660876 10 26 219 0.947368421 1.556302501 0.289473684 0.214285714 0.421052632 28 2 0 36 2L:5310191-5310286 7 21 791 FBgn0016076 178.9966667 5.846666667 8.973333333 0.11732062 3.591790194 2.340267459 6 -3 1.5 0.01 dme-miR-2535b-3p 7mer-A1 CGTGAGA 2L 5310551 5310557 + 2L_5310551_5310557_+ 0.782911824 0.782911824 0.782911824 0 vri FBtr0079071|FBtr0342936|FBtr0079070|FBtr0346579|FBtr0300020 5309719|5309719|5309719|5309719|5309719 5310996|5310996|5310625|5311223|5310610 2L + 5310503 5310589 3'utr vri FlyBase G2057.1 AACAAACATATACATTACACTTAAGAAACGCGTGAAGCACATTCAAAACGTGAGAGATGAAAGAAATCTGAAAAGAATTGATGAATA 190 5310560 0.855065786 12 144 678 0.763285024 1.084713735 0.236714976 0.08994709 0.169082126 189 37 12 158 2L:5310503-5310589 7 vri FBtr0346579|FBtr0300020|FBtr0342936|FBtr0079070|FBtr0079071 5309719|5309719|5309719|5309719|5309719 5311223|5310610|5310996|5310625|5310996 CGTGAGA 7mer-A1 dme-miR-2535b-3p 2L + 5310506 5310586 3'utr vri FlyBase G1636.1 AAACATATACATTACACTTAAGAAACGCGTGAAGCACATTCAAAACGTGAGAGATGAAAGAAATCTGAAAAGAATTGATGA 105 5310560 0.805005433 10 81 358 0.773584906 1.390935107 0.352201258 0.380952381 0.591194969 105 32 4 123 2L:5310506-5310586 7 131.5 792 FBgn0016076 178.9966667 5.846666667 8.973333333 0.734650552 22.49144812 14.65453195 -9 -9 -9 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2L 5316112 5316117 - 2L_5316112_5316117_- 1 1 1 0 Ncoa6 FBtr0329969|FBtr0307041 5315424|5315288 5317209|5317812 2L - 5316098 5316159 3'utr Ncoa6 FlyBase G7813.1 AAATATAAGGAGAAATGAGTGGAGAATATTGAGAATCAGTCGTCTAGTATCTGTCGTTTTGC 11 5316131 0.844541743 7 10 73 0.769230769 1 0.230769231 0.090909091 0.230769231 11 3 0 10 2L:5316098-5316159 6 Ncoa6 FBtr0307041|FBtr0329969 5315288|5315424 5317812|5317209 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2L - 5316101 5316149 3'utr Ncoa6 FlyBase G6074.1 AGAAATGAGTGGAGAATATTGAGAATCAGTCGTCTAGTATCTGTCGTTT 9 5316130 0.977965323 5 8 59 0.875 1.146128036 0.3125 0.777777778 0.875 9 2 0 14 2L:5316101-5316149 6 5.5 793 FBgn0031698 1745.396667 21.13666667 32.68333333 0.003151146 0.260211323 0.168281489 14 13 13.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2L 5316842 5316848 - 2L_5316842_5316848_- 0.823349562 0.823349562 0.823349562 0 Ncoa6 FBtr0329969|FBtr0307041|FBtr0307040 5315424|5315288|5316236 5317209|5317812|5317812 2L - 5316764 5316874 3'utr Ncoa6 FlyBase G7816.1 AAAATCCACCCATTGGAAATGATTTGCTAGTCATGTGAAACAGGCAATTTAATGTATAGCTCAGAAGATGAAATTTGAACAAATTAGTTGAGTAACGTATTTGAGAAGCTC 165 5316851 0.985201458 14 156 1263 0.936585366 1.806179974 0.224390244 0.206060606 0.36097561 165 11 2 192 2L:5316764-5316874 7 Ncoa6 FBtr0307040|FBtr0307041|FBtr0329969 5316236|5315288|5315424 5317812|5317812|5317209 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 5316829 5316886 3'utr Ncoa6 FlyBase G6078.2 TTACTCCCCAAAAAAATCCACCCATTGGAAATGATTTGCTAGTCATGTGAAACAGGCA 124 5316851 0.655334878 10 119 918 0.975247525 2.294466226 0.267326733 0.451612903 0.663366337 124 5 0 197 2L:5316829-5316886 7 134 794 FBgn0031698 1745.396667 21.13666667 32.68333333 0.076773379 6.339694055 4.099949006 3 3 3 0.01 dme-miR-965-3p 6mer2-7 ACGCTT 2L 5317152 5317157 - 2L_5317152_5317157_- 1 1 1 0 Ncoa6 FBtr0329969|FBtr0307041|FBtr0307040 5315424|5315288|5316236 5317209|5317812|5317812 2L - 5317095 5317230 stop_codon Ncoa6 FlyBase G7817.1 AGCTCACCGCAGCTGGCGTAGTGGAGTCGGATTACGGACGGCTACTTGTATATATCACACGCACTGATACCGAACGCTTTCGTTTGTAGTTCTTAGCCCTAGTTTCCGTTGAGGATTATTTTGTATAGTTAGTGGT 47 5317165 0.981013464 16 41 325 0.892857143 1.698970004 0.160714286 0.127659574 0.267857143 47 6 0 50 2L:5317095-5317230 6 Ncoa6 FBtr0307040|FBtr0307041|FBtr0329969 5316236|5315288|5315424 5317812|5317812|5317209 ACGCTT 6mer2-7 dme-miR-965-3p 2L - 5317110 5317223 stop_codon Ncoa6 FlyBase G6079.1 CGCAGCTGGCGTAGTGGAGTCGGATTACGGACGGCTACTTGTATATATCACACGCACTGATACCGAACGCTTTCGTTTGTAGTTCTTAGCCCTAGTTTCCGTTGAGGATTATTT 40 5317164 0.979651676 15 36 255 0.910714286 1.707570176 0.089285714 0.3 0.5 40 5 0 51 2L:5317110-5317223 6 25 795 FBgn0031698 1745.396667 21.13666667 32.68333333 0.014323392 1.182778742 0.764915859 8 7 7.5 0.01 dme-miR-305-3p 6mer2-7 TGTGCC 2L 5317440 5317445 - 2L_5317440_5317445_- 1 1 1 0 Ncoa6 FBtr0307041|FBtr0307040 5315288|5316236 5317812|5317812 2L - 5317421 5317460 3'utr Ncoa6 FlyBase G7819.1 ACGATGAGTTCAATCTGTGCCTGAACAACATCCTCAGCGA 45 5317445 0.756474061 2 44 259 0.980769231 1.707570176 0.423076923 0.111111111 0.230769231 45 1 0 51 2L:5317421-5317460 6 Ncoa6 FBtr0307040|FBtr0307041 5316236|5315288 5317812|5317812 TGTGCC 6mer2-7 dme-miR-305-3p 2L - 5317421 5317544 3'utr Ncoa6 FlyBase G6080.1 GTGCCGCGGATGTTGAGGTGGATGAGGTGCTGATGCCGGAGCTGGACAATGCCACGGCCTTGGACTGCGCCAGCTTTGTCGACTACGATGAGTTCAATCTGTGCCTGAACAACATCCTCAGCGA 29 5317445 0.964938233 10 29 158 1 1.633468456 0.372093023 0.379310345 0.581395349 29 0 0 43 2L:5317421-5317544 6 31.5 796 FBgn0031698 1745.396667 21.13666667 32.68333333 0.018047473 1.490301214 0.963793983 0 0 0 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 2L 540314 540319 + 2L_540314_540319_+ 0.993315599 1 0.996657799 0.004726585 ush FBtr0333012|FBtr0329895|FBtr0078063|FBtr0310027|FBtr0333013 539955|540018|539955|539955|539955 540532|540560|540560|540532|540532 2L + 540219 540355 3'utr ush FlyBase G853.1 ATATACAGTACACCTAAAGGAATAACACATAGATACTTAGGTACATTAATTTAGGCGCATACCCATTAAGTGGGAACCATGACATATAATGCATGCCAAAGCTTACCACTTAGACAGAAATTAAATTGAGGGCGAGA 156 540312 0.966895551 12 145 782 0.943502825 1.523746467 0.107344633 0.128205128 0.231638418 156 6 4 167 2L:540219-540355 6 ush FBtr0310027|FBtr0333013|FBtr0329895|FBtr0078063|FBtr0333012 539955|539955|540018|539955|539955 540532|540532|540560|540560|540532 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 2L + 540261 540523 3'utr ush FlyBase G683.1 ACATTAATTTAGGCGCATACCCATTAAGTGGGAACCATGACATATAATGCATGCCAAAGCTTACCACTTAGACAGAAATTAAATTGAGGGCGAGAAACTACAAGTTTGCAATGGTCTGCGGAGTAGAAGGAGGCGAAGTATTCCAATGTAGATCCAATACTATAATGTAAATTACTCGCTGTTCCCCATAAAGCGAGCAATTCTAACTGTGTAATTTAAATGAGTACATTATTTATTAAGTGTGTGCGACAATAAAAGTAATT 151 540312 0.964665094 28 146 765 0.978070175 2.348304863 0.105263158 0.373333333 0.587719298 150 5 0 223 2L:540261-540523 6 122 797 FBgn0003963 1303.193333 29.53666667 45.16666667 0.093616194 4.130459316 2.701107011 2 2 2 0.01 dme-miR-968-5p 7mer-A1 CTACTTA 2L 541672 541678 - 2L_541672_541678_- 0.611624312 0.512859087 0.5622417 0.069837543 lwr FBtr0310029|FBtr0078081|FBtr0078082 541391|541391|541235 541767|541767|541767 2L - 541639 541727 5'utr lwr FlyBase G6621.1 AAATACACACATCTAGCCGGTAAGCGTTTGTTTGGAATGCTCTCCACGTCTACTTACTTTTAAAGAATCGACTAATTTTGGATAGCCCC 28 541652 0.823710318 13 27 178 0.973684211 1.568201724 0.026315789 0.285714286 0.473684211 28 1 0 37 2L:541639-541727 7 lwr FBtr0078082|FBtr0310029|FBtr0078081 541235|541391|541391 541767|541767|541767 CTACTTA 7mer-m8 dme-miR-1002-5p 2L - 541639 541725 5'utr lwr FlyBase G5178.1 ATACACACATCTAGCCGGTAAGCGTTTGTTTGGAATGCTCTCCACGTCTACTTACTTTTAAAGAATCGACTAATTTTGGATAGCCCC 23 541652 0.737820399 14 22 163 0.967741935 1.176091259 0 0.304347826 0.483870968 23 0 1 30 2L:541639-541725 7 6 798 FBgn0010602 1112.636667 123.4966667 188.6266667 0.005392596 0.048584307 0.031808864 -26 -26 -26 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2L 5539598 5539603 - 2L_5539598_5539603_- 1 1 1 0 Hel25E FBtr0079125|FBtr0079124|FBtr0079123|FBtr0331676 5539324|5539495|5539324|5539492 5539630|5539630|5539630|5540779 2L - 5539561 5539616 3'utr Hel25E FlyBase G7885.1 TGTTAATCGGAACAAGACTATGCACTTCGAATAGATACAAACCTAAAACCTTTTTT 38 5539596 0.784436141 8 37 168 0.977272727 1.633468456 0.113636364 0.105263158 0.227272727 38 1 0 43 2L:5539561-5539616 6 Hel25E FBtr0331676 5539492 5540779 AAGACT 6mer3-8 dme-miR-14-3p 2L - 5539555 5539616 3'utr Hel25E FlyBase G6124.1 TGTTAATCGGAACAAGACTATGCACTTCGAATAGATACAAACCTAAAACCTTTTTTAAAACT 35 5539596 0.742140791 7 32 169 0.903225806 1.748188027 0.096774194 0.485714286 0.709677419 35 6 0 56 2L:5539555-5539616 6 27.5 799 FBgn0014189 1923.333333 131.82 201.5566667 0.014298094 0.208617812 0.136438057 -7 -7 -7 0.01 dme-bantam-3p 6mer2-7 GATCTC 2L 5539717 5539722 - 2L_5539717_5539722_- 1 1 1 0 Hel25E FBtr0331676 5539492 5540779 2L - 5539709 5539827 5'utr Hel25E FlyBase G7886.1 AAGGGACTGGCAATCACATTCGTTTCGGACGAGAACGACGCCAAGATACTTAACGAAGTACAGGATCGTTTCGATGTGAACATCAGTGAGCTGCCCGAGGAAATCGATCTCTCTACATA 49 5539715 0.958529738 10 45 220 0.923076923 1.681241237 0.442307692 0.06122449 0.115384615 49 4 0 48 2L:5539709-5539827 6 Hel25E FBtr0331676 5539492 5540779 GATCTC 6mer2-7 dme-bantam-3p 2L - 5539707 5539792 5'utr Hel25E FlyBase G6125.1 CGACGCCAAGATACTTAACGAAGTACAGGATCGTTTCGATGTGAACATCAGTGAGCTGCCCGAGGAAATCGATCTCTCTACATACA 38 5539715 0.954799446 10 34 156 0.944444444 1.40654018 0.481481481 0.289473684 0.5 38 2 1 51 2L:5539707-5539792 6 28 800 FBgn0014189 1923.333333 131.82 201.5566667 0.014558059 0.212410863 0.138918749 -7 -7 -7 0.01 dme-miR-2a-2-5p 7mer-m1 GATGAGG 2L 5540273 5540279 - 2L_5540273_5540279_- 0.825582373 0.825582373 0.825582373 0 Hel25E FBtr0331676 5539492 5540779 2L - 5540250 5540294 5'utr Hel25E FlyBase G7890.1 GAGGTCTACGTCGACGATGAGGCCAAGCTGACGCTGCACGGACTG 47 5540277 0.983732888 3 45 133 0.963636364 1.72427587 0.145454545 0.127659574 0.254545455 47 2 0 53 2L:5540250-5540294 7 Hel25E FBtr0331676 5539492 5540779 GATGAGG 7mer-m1 dme-miR-2a-2-5p 2L - 5540251 5540294 5'utr Hel25E FlyBase G6129.2 GAGGTCTACGTCGACGATGAGGCCAAGCTGACGCTGCACGGACT 32 5540277 0.974804876 4 29 69 1 1.672097858 0.042553191 0.375 0.574468085 32 0 0 47 2L:5540251-5540294 7 36 801 FBgn0014189 1923.333333 131.82 201.5566667 0.018717504 0.273099681 0.17860982 -2 -2 -2 0.01 dme-miR-304-5p 6mer2-7 GAGATT 2L 5545619 5545624 + 2L_5545619_5545624_+ 1 1 1 0 Lam FBtr0307058|FBtr0079100|FBtr0307059|FBtr0346460 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 2L + 5545565 5545631 3'utr Lam FlyBase G2114.1 AAGCACACACGAAGATCATAATTTAGAACCCAAAAACACACACACCGAGGTACAGAGATTTATTATT 14 5545628 0.965716974 6 13 66 0.882352941 1.176091259 0.058823529 0.214285714 0.352941176 14 2 0 15 2L:5545565-5545631 6 Lam FBtr0307059|FBtr0346460|FBtr0307058|FBtr0079100 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 GAGATT 6mer2-7 dme-miR-304-5p 2L + 5545601 5545635 3'utr Lam FlyBase G1680.2 CACACACACCGAGGTACAGAGATTTATTATTCAGC 8 5545627 0.968723613 4 7 43 0.916666667 1.041392685 0 0.375 0.583333333 8 1 0 11 2L:5545601-5545635 6 9 802 FBgn0002525 6943.616667 266.97 409.4166667 0.001296155 0.033711653 0.021982495 -9 -8 -8.5 0.01 dme-miR-980-5p 7mer-A1 AAAAACA 2L 5545675 5545681 + 2L_5545675_5545681_+ 0.782911824 0.782911824 0.782911824 0 Lam FBtr0307058|FBtr0079100|FBtr0307059|FBtr0346460 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 2L + 5545657 5545706 3'utr Lam FlyBase G2115.1 AGCGCCAATTATTTAATCAAAAACATTTGTGTAGAAGACATCCTGAATCT 15 5545683 0.975726008 6 13 82 0.882352941 1.176091259 0.176470588 0.133333333 0.235294118 15 2 0 15 2L:5545657-5545706 7 Lam FBtr0307059|FBtr0346460|FBtr0307058|FBtr0079100 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 AAAAACA 7mer-A1 dme-miR-980-5p 2L + 5545665 5545711 3'utr Lam FlyBase G1681.1 TTATTTAATCAAAAACATTTGTGTAGAAGACATCCTGAATCTTCGTT 11 5545683 0.729647781 5 10 71 0.941176471 0.903089987 0.411764706 0.363636364 0.588235294 11 0 1 16 2L:5545665-5545711 7 9.5 803 FBgn0002525 6943.616667 266.97 409.4166667 0.001368163 0.035584523 0.023203745 -8 -8 -8 0.01 dme-miR-282-5p 6mer3-8 AGAGGC 2L 5545826 5545831 + 2L_5545826_5545831_+ 1 1 1 0 Lam FBtr0307058|FBtr0079100|FBtr0307059|FBtr0346460 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 2L + 5545799 5545842 3'utr Lam FlyBase G2116.1 TTGTAAACTTTATTTGGTATAAACTGGAGAGGCATGTTGCCTCT 10 5545823 0.948553343 4 10 78 1 1.113943352 0.153846154 0.2 0.384615385 10 0 0 13 2L:5545799-5545842 6 Lam FBtr0307059|FBtr0346460|FBtr0307058|FBtr0079100 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 AGAGGC 6mer3-8 dme-miR-282-5p 2L + 5545799 5545840 3'utr Lam FlyBase G1682.1 TTGTAAACTTTATTTGGTATAAACTGGAGAGGCATGTTGCCT 6 5545823 0.946002277 2 5 47 0.777777778 0.84509804 0.111111111 0.5 0.666666667 6 2 0 7 2L:5545799-5545840 6 6.5 804 FBgn0002525 6943.616667 266.97 409.4166667 0.000936112 0.024347305 0.015876247 3 3 3 0.01 dme-miR-252-5p 7mer-m8 GTACTTA 2L 5545939 5545945 + 2L_5545939_5545945_+ 0.588283329 0.588299917 0.588291623 1.17E-05 Lam FBtr0307058|FBtr0079100|FBtr0307059|FBtr0346460 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 2L + 5545924 5546007 3'utr Lam FlyBase G2118.1 AACAATATTTTCGATGTACTTACGCTCCACCTACATATTTAGTAAATTAGTTTTTAAGCTATATCCCAGATAAACCAGTCGACG 11 5545938 0.985453426 6 10 91 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 2L:5545924-5546007 7 Lam FBtr0307059|FBtr0346460|FBtr0307058|FBtr0079100 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 GTACTTA 7mer-m8 dme-miR-252-5p 2L + 5545927 5545958 3'utr Lam FlyBase G1684.1 AATATTTTCGATGTACTTACGCTCCACCTACA 5 5545940 0.966843465 2 4 29 1 0.84509804 0 0.2 0.428571429 5 0 0 7 2L:5545927-5545958 7 6 805 FBgn0002525 6943.616667 266.97 409.4166667 0.000864103 0.022474435 0.014654997 1 -1 0 0.01 dme-miR-1007-3p 7mer-m8 TGAGCTT 2L 5546305 5546311 + 2L_5546305_5546311_+ 0.620203442 0.620203442 0.620203442 0 Lam FBtr0307058|FBtr0079100|FBtr0307059|FBtr0346460 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 2L + 5546239 5546358 3'utr Lam FlyBase G2121.1 TTTTTAGCCATGGCCATAGGGTTTACGATCCACCAAAACGGCTTTCTCCCGGTTTAGACCGGTTCTTGAGCTTCCTGCAGACATTTTACCGGACGAGCAACAATAAGAACAGCAACAACA 28 5546314 0.999960449 12 26 176 0.90625 0.860338007 0.03125 0.142857143 0.25 28 0 3 29 2L:5546239-5546358 7 Lam FBtr0307059|FBtr0346460|FBtr0307058|FBtr0079100 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 TGAGCTT 7mer-m8 dme-miR-1007-3p 2L + 5546283 5546339 3'utr Lam FlyBase G1687.1 TCTCCCGGTTTAGACCGGTTCTTGAGCTTCCTGCAGACATTTTACCGGACGAGCAAC 13 5546324 0.980947938 9 12 87 0.933333333 1.146128036 0.4 0.153846154 0.266666667 13 1 0 14 2L:5546283-5546339 7 11 806 FBgn0002525 6943.616667 266.97 409.4166667 0.001584189 0.041203131 0.026867494 -9 -19 -14 0.01 dme-miR-980-5p 7mer-m1 AAAAACT 2L 5546538 5546544 + 2L_5546538_5546544_+ 0.764095816 0.765586661 0.764841239 0.001054226 Lam FBtr0307058|FBtr0079100|FBtr0307059|FBtr0346460 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 2L + 5546421 5546574 3'utr Lam FlyBase G2122.1 ACGAAAGAAAATGGAAGTACACGTAGCGGCTCAGCGATCCGTCGCATTTTTTATGGGTGGGCGTGGTCGCGTTTTACGCCGGCCAAACAAATGCAACGCCCACACAGACTATTATACAAAAACTGATGAATACAACTAAATTTTAAGTACATCT 68 5546547 0.999986213 15 61 384 0.904109589 1.819543936 0.04109589 0.073529412 0.136986301 68 7 0 66 2L:5546421-5546574 7 Lam FBtr0307059|FBtr0346460|FBtr0307058|FBtr0079100 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 AAAAACT 7mer-m1 dme-miR-980-5p 2L + 5546512 5546571 3'utr Lam FlyBase G1690.1 TGCAACGCCCACACAGACTATTATACAAAAACTGATGAATACAACTAAATTTTAAGTACA 45 5546547 0.970508596 8 42 243 0.938461538 1.484299839 0.015384615 0.377777778 0.569230769 45 3 1 61 2L:5546512-5546571 7 34.5 807 FBgn0002525 6943.616667 266.97 409.4166667 0.004968592 0.129228003 0.084266232 -9 -9 -9 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 2L 572658 572663 + 2L_572658_572663_+ 1 1 1 0 CG2807 FBtr0332340|FBtr0078068 572649|572649 572907|572716 2L + 572651 572691 3'utr CG2807 FlyBase G877.1 ATTGTAATAGCTTATCTGCTAGTGGTAGGATTCTCTAAGAT 15 572667 0.803950445 3 14 146 0.944444444 1.230448921 0.277777778 0.133333333 0.277777778 15 1 0 17 2L:572651-572691 6 CG2807 FBtr0332340|FBtr0078068 572649|572649 572907|572716 TAGCTT 6mer3-8 dme-miR-79-3p 2L + 572656 572683 3'utr CG2807 FlyBase G703.1 AATAGCTTATCTGCTAGTGGTAGGATTC 7 572665 0.634769946 4 7 49 1 1.079181246 0.416666667 0.428571429 0.666666667 7 0 0 12 2L:572656-572683 6 10 808 FBgn0031266 921 26.72666667 40.98 0.010857763 0.374158144 0.244021474 -9 -7 -8 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 572735 572740 + 2L_572735_572740_+ 1 1 1 0 CG2807 FBtr0332340 572649 572907 2L + 572725 572780 3'utr CG2807 FlyBase G878.1 TGTTCTTAATTGATCTTTCCTGCCGTAAAATACAGAAAATCATTGGATCTTCAATT 16 572740 0.707135701 7 16 131 1 1.278753601 0.105263158 0.1875 0.315789474 16 0 0 19 2L:572725-572780 6 CG2807 FBtr0332340 572649 572907 TGATCT 6mer3-8 dme-bantam-3p 2L + 572725 572782 3'utr CG2807 FlyBase G704.1 TGTTCTTAATTGATCTTTCCTGCCGTAAAATACAGAAAATCATTGGATCTTCAATTAT 10 572741 0.985943312 3 8 72 0.928571429 0.812913357 0.071428571 0.3 0.5 10 0 1 13 2L:572725-572782 6 10 809 FBgn0031266 921 26.72666667 40.98 0.010857763 0.374158144 0.244021474 -5 -6 -5.5 0.01 dme-miR-184-3p 7mer-A1 CCGTCCA 2L 575294 575300 + 2L_575294_575300_+ 0.823349562 0.823349562 0.823349562 0 cold FBtr0310022|FBtr0078069 575235|575235 575734|575734 2L + 575242 575330 3'utr cold FlyBase G882.1 AGAGCCTTTGCTATACCAAGCACATTTCGCTTTTTGTATTATTTAAACGAAGCCGTCCATAAGCTAAGTAGATTCCACACTCCATTTAA 133 575301 0.800175826 19 115 820 0.858108108 1.802773725 0.222972973 0.090225564 0.182432432 133 20 1 127 2L:575242-575330 7 cold FBtr0310022|FBtr0078069 575235|575235 575734|575734 CCGTCCA 7mer-A1 dme-miR-184-3p 2L + 575241 575373 3'utr cold FlyBase G706.1 AAGAGCCTTTGCTATACCAAGCACATTTCGCTTTTTGTATTATTTAAACGAAGCCGTCCATAAGCTAAGTAGATTCCACACTCCATTTAAAACTACACCGTCAAAGTGCCTTGACTCAGTTGGGAAGTAATGC 97 575301 0.840128125 20 85 605 0.888111888 1.626682466 0.27972028 0.350515464 0.559440559 97 14 2 127 2L:575241-575373 7 84.5 810 FBgn0031268 127.6166667 15.33333333 23.50333333 0.662139219 5.510869565 3.595234718 -7 -7 -7 0.01 dme-miR-13b-2-5p 7mer-m8 TTTGACG 2L 575708 575714 + 2L_575708_575714_+ 0.659000274 0.659000274 0.659000274 0 cold FBtr0310022|FBtr0078069 575235|575235 575734|575734 2L + 575701 575736 3'utr cold FlyBase G884.1 AAGCAACTTTGACGTCTTTTTGGCGCTTTAATATAC 15 575720 0.740936823 4 15 166 1 1.204119983 0 0.066666667 0.125 15 0 0 16 2L:575701-575736 7 cold FBtr0310022|FBtr0078069 575235|575235 575734|575734 TTTGACG 7mer-m8 dme-miR-13b-2-5p 2L + 575701 575734 3'utr cold FlyBase G707.1 AAGCAACTTTGACGTCTTTTTGGCGCTTTAATAT 13 575720 0.71836694 2 13 138 1 1.301029996 0 0.384615385 0.6 13 0 0 20 2L:575701-575734 7 13 811 FBgn0031268 127.6166667 15.33333333 23.50333333 0.101867572 0.847826087 0.553113034 -12 -12 -12 0.01 dme-miR-968-5p 6mer3-8 ACTACT 2L 5767057 5767062 - 2L_5767057_5767062_- 1 1 1 0 CG9171 FBtr0301235 5767000 5769315 2L - 5767042 5767188 3'utr CG9171 FlyBase G7897.1 AGGATTTATAACTAATTTGACTAGAAGTCCTTGATCGTAAAATTTAGATTTACACATATTTCAAGAACGCCTCATATGTCCAAATAAAAATGTTTTAATAGGTAATTGCAACTCTGCTGAGCATGGACTACTAGCTAAAACCTAAGG 408 5767065 0.917980231 17 399 2171 0.984189723 2.396199347 0.205533597 0.191176471 0.347826087 408 7 1 498 2L:5767042-5767188 6 CG9171 FBtr0301235 5767000 5769315 ACTACT 6mer3-8 dme-miR-968-5p 2L - 5767041 5767089 3'utr CG9171 FlyBase G6135.1 AGGTAATTGCAACTCTGCTGAGCATGGACTACTAGCTAAAACCTAAGGA 228 5767065 0.912122935 6 228 1120 1 2.562292864 0.298630137 0.434210526 0.646575342 228 0 0 365 2L:5767041-5767089 6 301.5 812 FBgn0031738 813.1933333 26.58333333 40.79333333 0.370760541 11.34169279 7.390913548 3 3 3 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 5767760 5767765 - 2L_5767760_5767765_- 1 1 1 0 CG9171 FBtr0332038|FBtr0301235|FBtr0332039 5767590|5767000|5767590 5769315|5769315|5769315 2L - 5767558 5767780 3'utr CG9171 FlyBase G7901.1 TGATGTACGTTTTCGATGTGACTTGGGAACAACATACAACAATTGGTGTTTGTATAATTACATAAGCCTTGATTCCGCTGATATCATGTTTGCAAATCAAGTCTTCGCTCAAAAATTGATTTAATTGCATATTTTCCATTCGTAAGACTAAAATATCACTAAACATAATAAAAATGTTGAAAATGTAGCTAAGAGCAGAATTAAAATATAATTAGAATACAAC 69 5767758 0.98106772 25 66 482 0.977272727 1.934498451 0.136363636 0.217391304 0.386363636 69 2 0 86 2L:5767558-5767780 6 CG9171 FBtr0332039|FBtr0332038|FBtr0301235 5767590|5767590|5767000 5769315|5769315|5769315 ATGTGA 6mer3-8 dme-miR-1003-3p 2L - 5767544 5767780 3'utr CG9171 FlyBase G6138.1 TGATGTACGTTTTCGATGTGACTTGGGAACAACATACAACAATTGGTGTTTGTATAATTACATAAGCCTTGATTCCGCTGATATCATGTTTGCAAATCAAGTCTTCGCTCAAAAATTGATTTAATTGCATATTTTCCATTCGTAAGACTAAAATATCACTAAACATAATAAAAATGTTGAAAATGTAGCTAAGAGCAGAATTAAAATATAATTAGAATACAACAATTTGAATTAAAG 62 5767758 0.982942839 23 58 438 0.943820225 1.62324929 0.314606742 0.306451613 0.516853933 62 4 1 84 2L:5767544-5767780 6 19.5 813 FBgn0031738 813.1933333 26.58333333 40.79333333 0.023979537 0.73354232 0.478019284 -7 -7 -7 0.01 dme-miR-2535b-3p 6mer3-8 CCGTGA 2L 5768145 5768150 - 2L_5768145_5768150_- 1 1 1 0 CG9171 FBtr0332038|FBtr0301235|FBtr0332039 5767590|5767000|5767590 5769315|5769315|5769315 2L - 5768094 5768477 3'utr CG9171 FlyBase G7903.1 AATGTTTTTTGGGCAATGTAGACTTACTGCAAAGACCAAAATTTAGATTAGACCGATACCGGGCCAAAACAATTCCAACGTTAAATATTTGACTTGATTAGCAGAGTAGGAATCATTGAATTGAAACGTATTAAATAGACTTTGAGAGTTAAAGCGTAATAGTAATAATGATAAAGACAAGTTTCAAACAAAAAAAAACACAATTACTATTAAAATTTATACAAGAAACACACACATTGAGAATTGATTTGTTTACTTACCGCACTGAATGGTAGGCAGAGCAATTAATGCGATTGAAGATTACATTTCAATAAGCATAAATGCGAACCGTGATATTTGTACTAGTAAAGCGATTTGGAGATGTTAAACCTATTTGATAAGAAA 2013 5768156 0.991709654 71 1971 13379 0.98003992 2.544953456 0.097804391 0.184798808 0.34491018 2013 44 6 2455 2L:5768094-5768477 6 CG9171 FBtr0332039|FBtr0332038|FBtr0301235 5767590|5767590|5767000 5769315|5769315|5769315 CCGTGA 6mer3-8 dme-miR-2535b-3p 2L - 5768042 5768253 3'utr CG9171 FlyBase G6142.1 GAAACACACACATTGAGAATTGATTTGTTTACTTACCGCACTGAATGGTAGGCAGAGCAATTAATGCGATTGAAGATTACATTTCAATAAGCATAAATGCGAACCGTGATATTTGTACTAGTAAAGCGATTTGGAGATGTTAAACCTATTTGATAAGAAATGAGTGGGCGACGATCAAAAGGAAAGATCAGAGACCCATATGCATTAAACTT 941 5768156 0.960373701 36 929 5839 0.986256545 2.576053261 0.042539267 0.397449522 0.628926702 941 18 3 1507 2L:5768042-5768253 6 994 814 FBgn0031738 813.1933333 26.58333333 40.79333333 1.222341551 37.39184953 24.36672659 6 6 6 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 2L 5768512 5768517 - 2L_5768512_5768517_- 1 1 1 0 CG9171 FBtr0332038|FBtr0301235|FBtr0301236|FBtr0301234|FBtr0332039 5767590|5767000|5768251|5768251|5767590 5769315|5769315|5769315|5769315|5769315 2L - 5768478 5768629 3'utr CG9171 FlyBase G7904.1 ATTGGATATTCTTTTCAAAATACTCAAAAAGAGAAATTGAGAGCAACATTATTTTCGTATACCGGGGCGAGTTTCCTAGACATCAGCAAAACAAACAGTCTTACCACTTTTTTGTGTTTTATATATTTCCGCATTAAAGGCATAGATTAAAC 31 5768518 0.986638151 12 30 256 0.96875 1.491361694 0.03125 0.032258065 0.0625 31 1 0 31 2L:5768478-5768629 6 CG9171 FBtr0332039|FBtr0301236|FBtr0301234|FBtr0332038|FBtr0301235 5767590|5768251|5768251|5767590|5767000 5769315|5769315|5769315|5769315|5769315 TGTGTT 6mer3-8 dme-miR-317-3p 2L - 5768495 5768533 3'utr CG9171 FlyBase G6144.1 AGTCTTACCACTTTTTTGTGTTTTATATATTTCCGCATT 5 5768518 0.982122955 4 5 69 1 1 0 0.6 0.8 5 0 0 10 2L:5768495-5768533 6 6.5 815 FBgn0031738 813.1933333 26.58333333 40.79333333 0.007993179 0.244514107 0.159339761 1 1 1 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 2L 5768968 5768973 - 2L_5768968_5768973_- 0.999868206 0.999999943 0.999934075 9.31E-05 CG9171 FBtr0332038|FBtr0301235|FBtr0301236|FBtr0301234|FBtr0332039 5767590|5767000|5768251|5768251|5767590 5769315|5769315|5769315|5769315|5769315 2L - 5768962 5769154 3'utr CG9171 FlyBase G7907.2 AAGTGCGTGTTTTACAATTAGCTAGAGACTTAGCCCTAGAACTATAGAGCATTATGTAGTTAGGCTTAGCTATAGGTCAGGACGTGTAACGCCATGGGGGCCTATTGGGTTTTACCGCGTTCTGGGTTATCTTTTTCTACTCTGCAAAGCCTTGAGAGCATGGCTTACATAGACTTAACGTAGTTAAATGTGG 214 5768985 0.900918187 32 205 1440 0.956349206 2.080987047 0.166666667 0.154205607 0.281746032 214 10 1 241 2L:5768962-5769154 6 CG9171 FBtr0332039|FBtr0301236|FBtr0301234|FBtr0332038|FBtr0301235 5767590|5768251|5768251|5767590|5767000 5769315|5769315|5769315|5769315|5769315 AGTTAA 6mer3-8 dme-miR-999-3p 2L - 5768920 5769335 stop_codon CG9171 FlyBase G6147.2 GCAAGGGATGTGCGATATAGTAACTAATACTGAAGCCAAGCTGAGGTCAGTCCCGATTGAACGGGAAGGAGGAAAAGGCGAAAAGACTACAACCAACTTCACTATTACTATTTGCAATGCTATAGATCGGTTGTGTTGACTACCGGTTCCCATTCCCTCTATAGCATTGAATGCGCACTTCAAGTGCGTGTTTTACAATTAGCTAGAGACTTAGCCCTAGAACTATAGAGCATTATGTAGTTAGGCTTAGCTATAGGTCAGGACGTGTAACGCCATGGGGGCCTATTGGGTTTTACCGCGTTCTGGGTTATCTTTTTCTACTCTGCAAAGCCTTGAGAGCATGGCTTACATAGACTTAACGTAGTTAAATGTGGCTTTTAGGTATCATGGTGTATTCCATTTAGCTGGCCATTCTT 217 5768985 0.975952356 52 202 1397 0.941520468 1.808885867 0.16374269 0.391705069 0.614035088 217 16 4 322 2L:5768920-5769335 6 53 816 FBgn0031738 813.1933333 26.58333333 40.79333333 0.065175153 1.993730408 1.299231901 12 12 12 0.01 dme-miR-79-3p 7mer-A1 AGCTTTA 2L 5800823 5800829 - 2L_5800823_5800829_- 0.823349562 0.823342071 0.823345817 5.30E-06 CG14005 FBtr0079160 5800515 5800869 2L - 5800700 5800859 coding-3'utr CG14005 FlyBase G7919.1 TAGCACCACGTGGTAAGGACATTGTATGACAGCTTTAGCTTTAAGTTGGGAATAGAGTCGCGGCGCTCGACCCTGTGTATGTTTTTCAATTCGTTCCTTTCTCAGACACAGATGTCTAATTCACTCGACGTACAAAGCAGCAGCATAGCGAACCGAAGAT 105 5800825 0.999996235 14 100 964 0.96124031 1.792391689 0.186046512 0.19047619 0.341085271 105 4 1 124 2L:5800700-5800859 7 CG14005 FBtr0079160 5800515 5800869 AGCTTTA 7mer-A1 dme-miR-79-3p 2L - 5800788 5800870 stop_codon CG14005 FlyBase G6159.1 ATCCCGACTACTAGCACCACGTGGTAAGGACATTGTATGACAGCTTTAGCTTTAAGTTGGGAATAGAGTCGCGGCGCTCGACC 55 5800825 0.989660082 6 52 502 0.957746479 1.832508913 0.183098592 0.2 0.38028169 55 3 0 68 2L:5800788-5800870 7 68.5 817 FBgn0031739 237 20.57 31.17666667 0.289029536 3.330092368 2.197155993 -4 -4 -4 0.01 dme-miR-970-3p 6mer3-8 TCTTAT 2L 5921339 5921344 + 2L_5921339_5921344_+ 1 1 1 0 bchs FBtr0079144 5921241 5922776 2L + 5921315 5921362 3'utr bchs FlyBase G2161.1 TTAAACGTTAGTTAGGTTTAAAGCTCTTATTTATTCTTTCGGTCCAAT 18 5921352 0.956305005 4 18 201 1 1.342422681 0 0.166666667 0.318181818 18 0 0 22 2L:5921315-5921362 6 bchs FBtr0079144 5921241 5922776 TCTTAT 6mer3-8 dme-miR-970-3p 2L + 5921334 5921362 3'utr bchs FlyBase G1717.1 AAAGCTCTTATTTATTCTTTCGGTCCAAT 11 5921352 0.775190187 2 11 128 1 1.301029996 0 0.545454545 0.75 11 0 0 20 2L:5921334-5921362 6 13.5 818 FBgn0043362 457.73 4.51 6.893333333 0.029493369 2.993348115 1.958413926 -13 -13 -13 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2L 5921394 5921400 + 2L_5921394_5921400_+ 0.671796082 0.671796082 0.671796082 0 bchs FBtr0079144 5921241 5922776 2L + 5921377 5921421 3'utr bchs FlyBase G2162.1 AAGTTATTTTTACTTCAACCAAAGGCTGTTATATGATTTTACACT 81 5921406 0.615073393 7 81 526 1 1.963787827 0.184782609 0.135802469 0.239130435 81 0 0 92 2L:5921377-5921421 7 bchs FBtr0079144 5921241 5922776 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L + 5921377 5921418 3'utr bchs FlyBase G1718.1 AAGTTATTTTTACTTCAACCAAAGGCTGTTATATGATTTTAC 59 5921406 0.617539291 9 59 385 1 1.986771734 0.12371134 0.423728814 0.649484536 59 0 0 97 2L:5921377-5921418 7 70 819 FBgn0043362 457.73 4.51 6.893333333 0.152928582 15.5210643 10.15473888 -12 -12 -12 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 5955067 5955072 + 2L_5955067_5955072_+ 1 1 1 0 CG9044 FBtr0333231|FBtr0273412 5955000|5955000 5955235|5955235 2L + 5955016 5955162 3'utr CG9044 FlyBase G2192.1 TAGAAAATTGAATATAGCCTGTACCAATTATTGTGCAAAGTTTAAAATTGTTGATCTTAATTGACTATGTTATTTAATGTCAGATTAGTTTTATTAACTTAGGCTAGAGCTTTCAATCAATAAGAAATGGTGCTGTACCACGATTTA 136 5955065 0.885226338 25 129 1131 0.935294118 1.50242712 0.123529412 0.205882353 0.364705882 136 7 4 159 2L:5955016-5955162 6 CG9044 FBtr0333231|FBtr0273412 5955000|5955000 5955235|5955235 TGATCT 6mer3-8 dme-bantam-3p 2L + 5955016 5955095 3'utr CG9044 FlyBase G1739.1 TAGAAAATTGAATATAGCCTGTACCAATTATTGTGCAAAGTTTAAAATTGTTGATCTTAATTGACTATGTTATTTAATGT 79 5955065 0.840761897 12 76 675 0.972972973 1.73239376 0.171171171 0.316455696 0.513513514 79 2 1 108 2L:5955016-5955095 6 62.5 820 FBgn0031752 511 13.98 21.38 0.122309198 4.470672389 2.923292797 2 2 2 0.01 dme-miR-184-5p 8mer-A1 TGATAAGA 2L 5973473 5973480 - 2L_5973473_5973480_- 0.601217767 0.601217767 0.601217767 0 chic FBtr0079235|FBtr0309213|FBtr0079234|FBtr0079236 5972898|5973005|5972898|5972113 5973576|5973576|5973576|5973576 2L - 5973412 5973656 stop_codon chic FlyBase G7933.1 ACGAGGATCCCGTTCAGCCCCAGCAGGCCGCTTCCGTGGTAGAGAAACTTGGAGATTATCTGATTACTTGCGGGTACTAGGAGAATAGATCAACACAAACACCCCCATCAACCACAACAACAACAACACACACACACCAACAACTACAACTACAACAACAACAGCAGCAACAAATTTGATAAGAGCGAACCGTAAATGAACTAATAACACATAAAAAGTAATTATTAATATTTAAATTTATGGGA 90 5973481 0.964330644 25 84 434 0.935185185 1.305351369 0.259259259 0.166666667 0.305555556 90 3 4 101 2L:5973412-5973656 8 chic FBtr0079234|FBtr0079236|FBtr0079233|FBtr0309212|FBtr0079235|FBtr0309213 5972898|5972113|5973201|5973322|5972898|5973005 5973576|5973576|5973576|5973576|5973576|5973576 TGATAAGA 8mer-A1 dme-miR-184-5p 2L - 5973440 5973496 3'utr chic FlyBase G6171.1 ACAGCAGCAACAAATTTGATAAGAGCGAACCGTAAATGAACTAATAACACATAAAAA 19 5973481 0.932080192 7 19 74 1 1.431363764 0.148148148 0.263157895 0.481481481 19 0 0 27 2L:5973440-5973496 8 21 821 FBgn0000308 17707.58333 1966.28 3025.8 0.001185933 0.010680066 0.006940313 1 1 1 0.01 dme-miR-317-5p 6mer3-8 GTATCC 2L 5985481 5985486 + 2L_5985481_5985486_+ 0.999960607 1 0.999980303 2.79E-05 eIF-4a FBtr0079178|FBtr0079175|FBtr0079177|FBtr0307068|FBtr0079176|FBtr0331201 5985169|5985169|5985169|5985169|5985169|5985169 5985579|5985579|5985579|5985909|5985559|5985793 2L + 5985435 5985518 3'utr eIF-4a FlyBase G2204.1 GCGGCAGCAACACCACCACCAATTGCCGATTAGCCGGAACCCCTCTGTATCCATTTAGTTCTCTGTGTATCATCAATTTTAAAA 19 5985499 0.990583505 6 19 187 1 1.397940009 0 0.210526316 0.4 19 0 0 25 2L:5985435-5985518 6 eIF-4a FBtr0079176|FBtr0331201|FBtr0079177|FBtr0307068|FBtr0079178|FBtr0079175 5985169|5985169|5985169|5985169|5985169|5985169 5985559|5985793|5985579|5985909|5985579|5985579 GTATCC 6mer3-8 dme-miR-317-5p 2L + 5985449 5985518 3'utr eIF-4a FlyBase G1754.1 ACCACCAATTGCCGATTAGCCGGAACCCCTCTGTATCCATTTAGTTCTCTGTGTATCATCAATTTTAAAA 20 5985499 0.990488314 10 19 197 0.962962963 1.414973348 0.111111111 0.3 0.481481481 20 1 0 26 2L:5985449-5985518 6 8.5 822 FBgn0001942 24813.13333 1794.993333 2727.603333 0.000342561 0.004735394 0.003116289 -18 -18 -18 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC 2L 5990208 5990214 - 2L_5990208_5990214_- 0.661615645 0.661615645 0.661615645 0 lid FBtr0307071|FBtr0345336 5989461|5989398 5990641|5990641 2L - 5990139 5990277 3'utr lid FlyBase G7940.1 AATTTTATAATATATTTTACCATTACCTGCTATTCTTAGTTTTTGTTAATTTAATTCACTTTTTGTGTTCGCCTCTCGAGTTTTGGTTCAGTGCGCACGCAAAGTTTTCTTACGTTTTATTTGACTTTTTCCTTTAATC 197 5990215 0.946594863 15 190 2416 0.969957082 1.655138435 0.060085837 0.137055838 0.270386266 197 3 4 226 2L:5990139-5990277 7 lid FBtr0307071|FBtr0345336 5989461|5989398 5990641|5990641 TGTGTTC 7mer-m8 dme-miR-317-3p 2L - 5990196 5990271 3'utr lid FlyBase G6180.1 ATAATATATTTTACCATTACCTGCTATTCTTAGTTTTTGTTAATTTAATTCACTTTTTGTGTTCGCCTCTCGAGTT 119 5990215 0.827908948 7 111 1396 0.943396226 1.574031268 0.006289308 0.277310924 0.459119497 119 6 3 150 2L:5990196-5990271 7 72 823 FBgn0031759 1960.226667 33.73333333 51.87 0.036730446 2.134387352 1.388085599 1 1 1 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2L 5990249 5990254 - 2L_5990249_5990254_- 1 1 1 0 lid FBtr0307071|FBtr0345336 5989461|5989398 5990641|5990641 2L - 5990139 5990277 3'utr lid FlyBase G7940.1 AATTTTATAATATATTTTACCATTACCTGCTATTCTTAGTTTTTGTTAATTTAATTCACTTTTTGTGTTCGCCTCTCGAGTTTTGGTTCAGTGCGCACGCAAAGTTTTCTTACGTTTTATTTGACTTTTTCCTTTAATC 197 5990255 0.946594863 15 190 2416 0.969957082 1.655138435 0.060085837 0.137055838 0.270386266 197 3 4 226 2L:5990139-5990277 6 lid FBtr0307071|FBtr0345336 5989461|5989398 5990641|5990641 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2L - 5990196 5990271 3'utr lid FlyBase G6180.1 ATAATATATTTTACCATTACCTGCTATTCTTAGTTTTTGTTAATTTAATTCACTTTTTGTGTTCGCCTCTCGAGTT 119 5990255 0.827908948 7 111 1396 0.943396226 1.574031268 0.006289308 0.277310924 0.459119497 119 6 3 150 2L:5990196-5990271 6 78.5 824 FBgn0031759 1960.226667 33.73333333 51.87 0.040046389 2.327075099 1.513398882 1 1 1 0.01 dme-miR-33-5p 7mer-A1 AATGCAA 2L 5990345 5990351 - 2L_5990345_5990351_- 0.782911824 0.782911824 0.782911824 0 lid FBtr0307071|FBtr0345336 5989461|5989398 5990641|5990641 2L - 5990331 5990378 3'utr lid FlyBase G7942.1 GGATTAATAATTAAGCAAAAGATATGAAATGCAAACAAAGCAACACAA 13 5990350 0.90985326 5 13 37 1 1.204119983 0.25 0.230769231 0.375 13 0 0 16 2L:5990331-5990378 7 lid FBtr0307071|FBtr0345336 5989461|5989398 5990641|5990641 AATGCAA 7mer-A1 dme-miR-33-5p 2L - 5990335 5990371 3'utr lid FlyBase G6181.1 TAATTAAGCAAAAGATATGAAATGCAAACAAAGCAAC 6 5990354 0.935340308 2 5 16 0.909090909 1 0.181818182 0.5 0.727272727 6 1 0 10 2L:5990335-5990371 7 6.5 825 FBgn0031759 1960.226667 33.73333333 51.87 0.003315943 0.192687747 0.125313283 -1 3 1 0.01 dme-miR-968-5p 6mer3-8 ACTACT 2L 5990576 5990581 - 2L_5990576_5990581_- 1 1 1 0 lid FBtr0307071|FBtr0345336 5989461|5989398 5990641|5990641 2L - 5990543 5990670 stop_codon lid FlyBase G7943.1 AGCAGCGGGCGGTGCAATCGGCGCGGTAGAGTAACGTATATAGAGTCCAGGAGGTGCAGTAACAGCCGATTGTGTTTTACGCATGATGTACTACTAAATACCCGATAAAGGCCGTCTACCGGTATTTA 93 5990584 0.935817095 14 92 504 0.991666667 2.075546961 0.166666667 0.215053763 0.391666667 93 1 0 119 2L:5990543-5990670 6 lid FBtr0307071|FBtr0345336 5989461|5989398 5990641|5990641 ACTACT 6mer3-8 dme-miR-968-5p 2L - 5990563 5990651 stop_codon lid FlyBase G6182.1 GGCGCGGTAGAGTAACGTATATAGAGTCCAGGAGGTGCAGTAACAGCCGATTGTGTTTTACGCATGATGTACTACTAAATACCCGATAA 72 5990584 0.969101785 6 69 389 0.973451327 1.740362689 0.14159292 0.402777778 0.619469027 72 2 1 110 2L:5990563-5990651 6 70 826 FBgn0031759 1960.226667 33.73333333 51.87 0.035710156 2.075098814 1.349527665 3 3 3 0.01 dme-miR-184-3p 6mer3-8 TCCGTC 2L 6002231 6002236 + 2L_6002231_6002236_+ 1 1 1 0 Tsp26A FBtr0307300|FBtr0332600|FBtr0113024 6001736|6001736|6001736 6003738|6003738|6003738 2L + 6002214 6002288 3'utr Tsp26A FlyBase G2220.1 AACTAAAGCAAACGCATTCCGTCTTCGTGGACATTGACTAATATTAACTAGGTTGCCAAATTTGTTGCTGTTTTT 85 6002230 0.907424073 7 84 493 0.989795918 1.986771734 0.408163265 0.152941176 0.265306122 85 1 0 97 2L:6002214-6002288 6 Tsp26A FBtr0332600|FBtr0113024|FBtr0307300 6001736|6001736|6001736 6003738|6003738|6003738 TCCGTC 6mer3-8 dme-miR-184-3p 2L + 6002215 6002258 3'utr Tsp26A FlyBase G1770.1 ACTAAAGCAAACGCATTCCGTCTTCGTGGACATTGACTAATATT 53 6002230 0.910000636 3 50 278 0.987179487 1.58546073 0.448717949 0.384615385 0.58974359 52 0 1 77 2L:6002215-6002258 6 64 827 FBgn0031760 374.3466667 15.47666667 23.65666667 0.170964525 4.135257377 2.705368466 1 1 1 0.01 dme-miR-1008-3p 8mer-A1 AGCTGTGA 2L 6002422 6002429 + 2L_6002422_6002429_+ 0.634917808 0.643126141 0.639021974 0.005804145 Tsp26A FBtr0307300|FBtr0332600|FBtr0113024 6001736|6001736|6001736 6003738|6003738|6003738 2L + 6002409 6002448 3'utr Tsp26A FlyBase G2221.1 TATCTTGAAATGCAGCTGTGATATATTTTTAAAGAAAAGT 57 6002434 0.705512977 10 46 493 0.825 1.51851394 0.1125 0.263157895 0.475 57 13 1 66 2L:6002409-6002448 8 Tsp26A FBtr0332600|FBtr0113024|FBtr0307300 6001736|6001736|6001736 6003738|6003738|6003738 AGCTGTGA 8mer-A1 dme-miR-1008-3p 2L + 6002408 6002452 3'utr Tsp26A FlyBase G1771.1 TTATCTTGAAATGCAGCTGTGATATATTTTTAAAGAAAAGTATAG 52 6002435 0.961990547 11 47 484 0.9375 1.875061263 0.125 0.403846154 0.6125 52 5 0 75 2L:6002408-6002452 8 54.5 828 FBgn0031760 374.3466667 15.47666667 23.65666667 0.145586978 3.52143011 2.303790334 -12 -13 -12.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 6002839 6002844 + 2L_6002839_6002844_+ 1 1 1 0 Tsp26A FBtr0307300|FBtr0332600|FBtr0113024 6001736|6001736|6001736 6003738|6003738|6003738 2L + 6002817 6002860 3'utr Tsp26A FlyBase G2225.1 AGGAAAACATTGATTCGCTCTTGTACCTTTTTAAATCTATATTG 39 6002838 0.710189588 6 39 430 1 1.662757832 0.043478261 0.179487179 0.304347826 39 0 0 46 2L:6002817-6002860 6 Tsp26A FBtr0332600|FBtr0113024|FBtr0307300 6001736|6001736|6001736 6003738|6003738|6003738 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 6002825 6002861 3'utr Tsp26A FlyBase G1773.1 ATTGATTCGCTCTTGTACCTTTTTAAATCTATATTGC 26 6002838 0.72004263 5 26 302 1 1.544068044 0 0.307692308 0.485714286 26 0 0 35 2L:6002825-6002861 6 32.5 829 FBgn0031760 374.3466667 15.47666667 23.65666667 0.086817923 2.099935387 1.373819924 1 1 1 0.01 dme-miR-980-3p 8mer-A1 GGCAGCTA 2L 6003357 6003364 + 2L_6003357_6003364_+ 0.668734347 0.668734347 0.668734347 0 Tsp26A FBtr0307300|FBtr0332600|FBtr0113024 6001736|6001736|6001736 6003738|6003738|6003738 2L + 6003307 6003382 3'utr Tsp26A FlyBase G2227.1 TGCCCAAAAATCTTGTATGTACACTTGCAACTGAGCAATTGGCCAGATGTGGCAGCTAATACACTTTTTGGATATG 104 6003356 0.966414869 6 101 545 0.977777778 2.120573931 0.007407407 0.230769231 0.407407407 104 3 0 132 2L:6003307-6003382 8 Tsp26A FBtr0332600|FBtr0113024|FBtr0307300 6001736|6001736|6001736 6003738|6003738|6003738 GGCAGCTA 8mer-A1 dme-miR-980-3p 2L + 6003303 6003380 3'utr Tsp26A FlyBase G1775.1 AATATGCCCAAAAATCTTGTATGTACACTTGCAACTGAGCAATTGGCCAGATGTGGCAGCTAATACACTTTTTGGATA 58 6003356 0.965372589 4 57 307 0.988505747 1.934498451 0 0.362068966 0.574712644 58 1 0 86 2L:6003303-6003380 8 79 830 FBgn0031760 374.3466667 15.47666667 23.65666667 0.211034335 5.104458324 3.3394392 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2L 6007585 6007591 - 2L_6007585_6007591_- 0.671796082 0.671796082 0.671796082 0 CG9098 FBtr0332602|FBtr0079228|FBtr0079229 6007362|6007362|6007503 6007907|6007907|6007907 2L - 6007576 6007616 3'utr CG9098 FlyBase G7976.1 AAGAGCCACCTCACTCTGATGTACTACCAAAGTCTTGTATT 22 6007597 0.706474109 4 20 127 0.857142857 1.380211242 0.142857143 0.181818182 0.357142857 22 4 0 24 2L:6007576-6007616 7 CG9098 FBtr0079228|FBtr0079229|FBtr0332602 6007362|6007503|6007362 6007907|6007907|6007907 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 6007580 6007606 3'utr CG9098 FlyBase G6210.1 TCACTCTGATGTACTACCAAAGTCTTG 7 6007595 0.679050878 2 7 37 1 1 0.1 0.428571429 0.6 7 0 0 10 2L:6007580-6007606 7 13.5 831 FBgn0031762 5 0.196666667 0.31 2.7 68.6440678 43.5483871 6 4 5 0.01 dme-miR-277-3p 7mer-A1 GCATTTA 2L 6041268 6041274 - 2L_6041268_6041274_- 0.768095732 0.823349562 0.795722647 0.039070407 ade2 FBtr0079219|FBtr0079220|FBtr0079221 6041179|6041179|6041179 6041313|6041313|6041313 2L - 6041228 6041289 3'utr ade2 FlyBase G7995.1 TTAAATAGGTTCTTGGCATTTATGACCTGATATATCTAAATACTATATACACGAATTTGTTT 63 6041270 0.987501565 14 59 593 0.929411765 1.897627091 0.258823529 0.238095238 0.435294118 63 6 0 79 2L:6041228-6041289 7 ade2 FBtr0079219|FBtr0079220|FBtr0079221 6041179|6041179|6041179 6041313|6041313|6041313 GCATTTA 7mer-A1 dme-miR-277-3p 2L - 6041248 6041289 3'utr ade2 FlyBase G6217.1 TTAAATAGGTTCTTGGCATTTATGACCTGATATATCTAAATA 30 6041269 0.652043457 8 30 277 1 1.716003344 0.173076923 0.6 0.769230769 30 0 0 52 2L:6041248-6041289 7 45 832 FBgn0000052 854.3333333 23.79 36.27666667 0.052672649 1.891551072 1.240466783 -4 -5 -4.5 0.01 dme-miR-79-3p 6mer2-7 AGCTTT 2L 6046713 6046718 - 2L_6046713_6046718_- 1 1 1 0 slmo FBtr0343130|FBtr0079218|FBtr0299810|FBtr0079217|FBtr0112945 6046514|6046652|6046649|6046652|6046649 6047052|6047052|6047052|6047052|6047052 2L - 6046678 6046732 3'utr slmo FlyBase G8015.1 ACATAGTCAATGTAAGCTTTGTAAGCCGCCGCAGATTTCGAAGAACGAGAGGAGC 12 6046719 0.970537166 7 12 69 1 1.113943352 0 0.083333333 0.153846154 12 0 0 13 2L:6046678-6046732 6 slmo FBtr0112945|FBtr0343130|FBtr0079218|FBtr0299810|FBtr0079217 6046649|6046514|6046652|6046649|6046652 6047052|6047052|6047052|6047052|6047052 AGCTTT 6mer2-7 dme-miR-79-3p 2L - 6046686 6046728 3'utr slmo FlyBase G6233.1 AGTCAATGTAAGCTTTGTAAGCCGCCGCAGATTTCGAAGAACG 6 6046720 0.822863583 3 5 35 0.933333333 0.84509804 0.066666667 0.833333333 0.933333333 6 0 1 14 2L:6046686-6046728 6 7 833 FBgn0029161 669.6266667 62.72666667 95.86333333 0.010453586 0.111595281 0.07302062 1 2 1.5 0.01 dme-miR-305-5p 7mer-m8 AGTACAA 2L 6046966 6046972 - 2L_6046966_6046972_- 0.643267584 0.643267584 0.643267584 0 slmo FBtr0343130|FBtr0079218|FBtr0299810|FBtr0079217|FBtr0112945 6046514|6046652|6046649|6046652|6046649 6047052|6047052|6047052|6047052|6047052 2L - 6046929 6047034 3'utr slmo FlyBase G8017.1 TGCAAGGTCGCGCGGGGGCTGTTCACTAGTGAATTATTTAGATGGCGCGCGGTCGTCGTTTTAGTACAACTAATTAATCGATGGCACGATGGACATGGACAGCAAC 82 6046974 0.942682906 14 80 621 0.978947368 1.667452953 0.336842105 0.146341463 0.263157895 82 1 1 93 2L:6046929-6047034 7 slmo FBtr0112945|FBtr0343130|FBtr0079218|FBtr0299810|FBtr0079217 6046649|6046514|6046652|6046649|6046652 6047052|6047052|6047052|6047052|6047052 AGTACAA 7mer-m8 dme-miR-305-5p 2L - 6046929 6047030 3'utr slmo FlyBase G6235.1 AGGTCGCGCGGGGGCTGTTCACTAGTGAATTATTTAGATGGCGCGCGGTCGTCGTTTTAGTACAACTAATTAATCGATGGCACGATGGACATGGACAGCAAC 56 6046974 0.882109073 11 54 384 0.948051948 1.164352856 0.376623377 0.267857143 0.467532468 56 0 4 73 2L:6046929-6047030 7 40.5 834 FBgn0029161 669.6266667 62.72666667 95.86333333 0.060481462 0.645658412 0.422476442 2 2 2 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 2L 6053818 6053824 + 2L_6053818_6053824_+ 0.620204266 0.620204266 0.620204266 0 CG9135 FBtr0343121 6053257 6053877 2L + 6053717 6053866 3'utr CG9135 FlyBase G2252.1 ACTACAAAACACGTAAATTAACGAACTAAGCGCATAGGTTACATATAAAAAGTATACCATGGAAAAATCCAATACCAGTTGCAACTATTAATAGTACATCATGCATTTTAATCTTATACAAAGGAATATTTAAATAAAGAGAATGTTAGT 28 6053818 0.978030085 14 26 180 0.971428571 1.230448921 0.057142857 0.178571429 0.342857143 28 0 1 34 2L:6053717-6053866 7 CG9135 FBtr0343121 6053257 6053877 TGCATTT 7mer-m8 dme-miR-277-3p 2L + 6053760 6053834 3'utr CG9135 FlyBase G1794.1 TATAAAAAGTATACCATGGAAAAATCCAATACCAGTTGCAACTATTAATAGTACATCATGCATTTTAATCTTATA 18 6053818 0.987390213 7 17 148 0.961538462 1.397940009 0 0.333333333 0.538461538 18 1 0 25 2L:6053760-6053834 7 11.5 835 FBgn0031769 791.34 43.62666667 67.18666667 0.014532312 0.263600244 0.171164914 0 0 0 0.01 dme-miR-995-5p 6mer3-8 AATTCG 2L 6073589 6073594 + 2L_6073589_6073594_+ 1 1 1 0 Kr-h2 FBtr0343126|FBtr0079192 6073461|6073461 6073961|6073961 2L + 6073487 6073617 3'utr Kr-h2 FlyBase G2266.2 CAACAATCAAATGACATATGAATAAGGCTATTTAAATACCAGTTCACTTGCATAGATGTTCACACAGGAGATTGGGGTTCATCCGTTTTATTTGTTAGCCGAAATTCGTTGCACCTTTTCGAAGCGAAACT 21 6073596 0.975707433 15 20 169 0.958333333 1.361727836 0.208333333 0.095238095 0.208333333 21 1 0 23 2L:6073487-6073617 6 Kr-h2 FBtr0079192|FBtr0343126|FBtr0302212 6073461|6073461|6073461 6073961|6073961|6073712 AATTCG 6mer3-8 dme-miR-995-5p 2L + 6073581 6073612 3'utr Kr-h2 FlyBase G1808.1 TTAGCCGAAATTCGTTGCACCTTTTCGAAGCG 7 6073596 0.713862806 4 7 49 1 1.204119983 0.25 0.714285714 0.875 7 0 0 16 2L:6073581-6073612 6 6 836 FBgn0266449 611 49.99666667 76.03333333 0.009819967 0.120008001 0.078912758 -7 -7 -7 0.01 dme-miR-14-3p 7mer-m8 AAGACTG 2L 6095586 6095592 + 2L_6095586_6095592_+ 0.671795832 0.671795832 0.671795832 0 Kr-h1 FBtr0344438|FBtr0344437 6095555|6095555 6096498|6096498 2L + 6095552 6095743 stop_codon Kr-h1 FlyBase G2287.1 CCTAGGGGTCCAAGGCCGATCCCCAATCAGCATTAAGACTGTCCAAACAAATTCTAACTGAAATTAGCCTAAGTTTTTTCTCTGAGGTTCGGGGTTAGGCCTGGAAAAAGAAAGCATAGAAACGTATGGATATGGCAGTGAGATAGTTTTCCAGCAGCGAAAATGAAAATGCCAAAAGTATTAAAAAAGGGA 168 6095583 0.941213682 18 157 850 0.928205128 1.78055732 0.087179487 0.160714286 0.276923077 168 12 2 181 2L:6095552-6095743 7 Kr-h1 FBtr0344437|FBtr0344438 6095555|6095555 6096498|6096498 AAGACTG 7mer-m8 dme-miR-14-3p 2L + 6095544 6095661 stop_codon Kr-h1 FlyBase G1818.1 CAAGGCCTCCTAGGGGTCCAAGGCCGATCCCCAATCAGCATTAAGACTGTCCAAACAAATTCTAACTGAAATTAGCCTAAGTTTTTTCTCTGAGGTTCGGGGTTAGGCCTGGAAAAAG 106 6095584 0.999444007 16 101 522 0.953020134 1.851258349 0.053691275 0.320754717 0.516778523 106 6 1 142 2L:6095544-6095661 7 97 837 FBgn0266450 461.9366667 12.49333333 19.07 0.209985496 7.764140875 5.086523335 3 2 2.5 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 2L 6095894 6095899 + 2L_6095894_6095899_+ 1 1 1 0 Kr-h1 FBtr0344438|FBtr0344437 6095555|6095555 6096498|6096498 2L + 6095857 6095940 3'utr Kr-h1 FlyBase G2288.1 AGTTTGGCATATACAATGTAGGTATAGTTTGTTTTCCTGTGTTGTCCACTTAGTCAAATTGCAGCAATTGGCATTATGCGTATT 17 6095899 0.990520638 11 16 166 0.954545455 1.322219295 0.181818182 0.235294118 0.409090909 17 1 0 21 2L:6095857-6095940 6 Kr-h1 FBtr0344437|FBtr0344438 6095555|6095555 6096498|6096498 TGTGTT 6mer3-8 dme-miR-317-3p 2L + 6095856 6095929 3'utr Kr-h1 FlyBase G1820.1 TAGTTTGGCATATACAATGTAGGTATAGTTTGTTTTCCTGTGTTGTCCACTTAGTCAAATTGCAGCAATTGGCA 19 6095906 0.755073136 11 18 168 1 1.397940009 0.4 0.315789474 0.48 19 0 0 25 2L:6095856-6095929 6 10.5 838 FBgn0266450 461.9366667 12.49333333 19.07 0.022730389 0.840448239 0.550603041 -5 -12 -8.5 0.01 dme-miR-980-5p 7mer-m8 GAAAAAC 2L 6096080 6096086 + 2L_6096080_6096086_+ 0.705949576 0.705949576 0.705949576 0 Kr-h1 FBtr0344438|FBtr0344437 6095555|6095555 6096498|6096498 2L + 6096034 6096120 3'utr Kr-h1 FlyBase G2289.1 AATAAGTTACGCGCATAACTACATATATACACATATTAATGAGAACGAAAAACCATGGCCATATTGGCGCTTAATATTTATAAAATA 36 6096089 0.92576977 8 35 126 0.951219512 1.591064607 0.12195122 0.138888889 0.243902439 36 2 0 39 2L:6096034-6096120 7 Kr-h1 FBtr0344437|FBtr0344438 6095555|6095555 6096498|6096498 GAAAAAC 7mer-m8 dme-miR-980-5p 2L + 6096056 6096108 3'utr Kr-h1 FlyBase G1821.1 ATATATACACATATTAATGAGAACGAAAAACCATGGCCATATTGGCGCTTAAT 20 6096089 0.909516138 3 20 44 1 1.51851394 0.090909091 0.5 0.696969697 20 0 0 33 2L:6096056-6096108 7 23.5 839 FBgn0266450 461.9366667 12.49333333 19.07 0.050872775 1.881003202 1.232302045 -9 -9 -9 0.01 dme-miR-7-5p 6mer2-7 TCTTCC 2L 6096161 6096166 + 2L_6096161_6096166_+ 1 1 1 0 Kr-h1 FBtr0344438|FBtr0344437 6095555|6095555 6096498|6096498 2L + 6096132 6096201 3'utr Kr-h1 FlyBase G2290.1 TATTTATTATGAACTCTGCTCGCCAAACTTCTTCCTTCCCCTCCACGATTAGTGTCAACGGCATCTTTGA 14 6096148 0.712390714 7 11 81 0.75 1.079181246 0 0.142857143 0.25 14 4 0 12 2L:6096132-6096201 6 Kr-h1 FBtr0344437|FBtr0344438 6095555|6095555 6096498|6096498 TCTTCC 6mer2-7 dme-miR-7-5p 2L + 6096117 6096174 3'utr Kr-h1 FlyBase G1822.1 AATACATATAATACTTATTTATTATGAACTCTGCTCGCCAAACTTCTTCCTTCCCCTC 12 6096141 0.980015505 5 12 88 1 1.230448921 0 0.25 0.470588235 12 0 0 17 2L:6096117-6096174 6 4.5 840 FBgn0266450 461.9366667 12.49333333 19.07 0.009741595 0.360192102 0.235972732 13 20 16.5 0.01 dme-miR-184-5p 6mer3-8 TGATAA 2L 6096304 6096309 + 2L_6096304_6096309_+ 1 1 1 0 Kr-h1 FBtr0344438|FBtr0344437 6095555|6095555 6096498|6096498 2L + 6096238 6096345 3'utr Kr-h1 FlyBase G2291.1 CTAAATAAGGGAAAACTGAGGAAAAAGGATCGGTAACTTTAATTTTACACACGGAGAATATTGAACTGATAAACAAGAAGAAAGCAAGCATAACTACGTTTATATACA 319 6096298 0.954860386 12 310 1424 0.975062344 1.814025507 0.02244389 0.194357367 0.359102244 319 5 5 391 2L:6096238-6096345 6 Kr-h1 FBtr0344437|FBtr0344438 6095555|6095555 6096498|6096498 TGATAA 6mer3-8 dme-miR-184-5p 2L + 6096259 6096319 3'utr Kr-h1 FlyBase G1823.1 AAAAAGGATCGGTAACTTTAATTTTACACACGGAGAATATTGAACTGATAAACAAGAAGAA 205 6096298 0.680934594 8 193 894 0.949152542 2.146128036 0.047457627 0.356097561 0.552542373 205 14 1 280 2L:6096259-6096319 6 253.5 841 FBgn0266450 461.9366667 12.49333333 19.07 0.548776528 20.29082177 13.29313057 6 6 6 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 6096906 6096912 - 2L_6096906_6096912_- 0.658999527 0.658999527 0.658999527 0 CG9175 FBtr0079212|FBtr0079211 6096696|6096696 6097167|6097167 2L - 6096885 6096954 3'utr CG9175 FlyBase G8041.1 TGTTTATCTCTCTAGCCACCGCAAACGAAGCCTTGCTCGTTTGGCAGCTTTGCCCGTTGTACATGATTTT 1317 6096914 0.790274106 11 1305 11776 0.987991995 2.170555059 0.350233489 0.119210326 0.226150767 1317 9 9 1481 2L:6096885-6096954 7 CG9175 FBtr0079212|FBtr0079211 6096696|6096696 6097167|6097167 GGCAGCT 7mer-m8 dme-miR-980-3p 2L - 6096889 6096958 3'utr CG9175 FlyBase G6254.1 AATTTGTTTATCTCTCTAGCCACCGCAAACGAAGCCTTGCTCGTTTGGCAGCTTTGCCCGTTGTACATGA 891 6096914 0.851952976 11 886 7867 0.995780591 3.151063253 0.319268636 0.405162738 0.627285513 891 6 0 1416 2L:6096889-6096958 7 1092 842 FBgn0031779 121.6666667 7.2 10.92 8.975342466 151.6666667 100 2 2 2 0.01 dme-miR-970-3p 6mer3-8 TCTTAT 2L 6096990 6096995 - 2L_6096990_6096995_- 1 1 1 0 CG9175 FBtr0079212|FBtr0079211 6096696|6096696 6097167|6097167 2L - 6096956 6097024 3'utr CG9175 FlyBase G8042.1 AGTGCATAGTTTGTGCCGGCTGCCTTATCTCTTATACTAATTGCAATGTTTGCTTAGTTGTATCATAAT 115 6096993 0.988423229 12 109 1002 0.954545455 1.46834733 0.207792208 0.269565217 0.454545455 115 3 4 147 2L:6096956-6097024 6 CG9175 FBtr0079212|FBtr0079211 6096696|6096696 6097167|6097167 TCTTAT 6mer3-8 dme-miR-970-3p 2L - 6096981 6097031 3'utr CG9175 FlyBase G6255.1 TAGTTTAAGTGCATAGTTTGTGCCGGCTGCCTTATCTCTTATACTAATTGC 110 6096993 0.723822713 7 105 923 0.9625 1.710399466 0.31875 0.336363636 0.54375 110 4 2 154 2L:6096981-6097031 6 102.5 843 FBgn0031779 121.6666667 7.2 10.92 0.842465753 14.23611111 9.386446886 -2 -2 -2 0.01 dme-miR-277-3p 6mer3-8 TGCATT 2L 6097131 6097136 - 2L_6097131_6097136_- 0.999999999 1 1 0 CG9175 FBtr0079212|FBtr0079211 6096696|6096696 6097167|6097167 2L - 6097110 6097204 stop_codon CG9175 FlyBase G8043.1 CGCCGTGTTCGTGCTGTGCTCCTACATTGGCATCTGATGCTCAATGGCCAGAAGAGAGTTATTCGATTTGCATTATTAGTTTGTAAACAGGGTTT 44 6097138 0.809251049 12 43 476 0.980769231 1.707570176 0.173076923 0.181818182 0.307692308 44 1 0 51 2L:6097110-6097204 6 CG9175 FBtr0079212|FBtr0079211 6096696|6096696 6097167|6097167 TGCATT 6mer3-8 dme-miR-277-3p 2L - 6097097 6097186 stop_codon CG9175 FlyBase G6256.1 CTCCTACATTGGCATCTGATGCTCAATGGCCAGAAGAGAGTTATTCGATTTGCATTATTAGTTTGTAAACAGGGTTTAGTTTTCTGCAAT 26 6097138 0.793856487 9 24 286 0.945945946 1.243038049 0.108108108 0.346153846 0.540540541 26 1 1 35 2L:6097097-6097186 6 27.5 844 FBgn0031779 121.6666667 7.2 10.92 0.226027397 3.819444444 2.518315018 2 2 2 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 2L 6123350 6123355 + 2L_6123350_6123355_+ 0.851209832 0.710401621 0.780805726 0.099566433 stai FBtr0333406|FBtr0079196|FBtr0079197|FBtr0304908|FBtr0079198 6123063|6123063|6123063|6123063|6123063 6123899|6123899|6124653|6124653|6123899 2L + 6123130 6123396 3'utr stai FlyBase G2300.1 AAAAAGAACAGCAACACTGCATAATACACCAACACATATTTAAGCAAGAAAACCCTTAAAACTGAAAACGATTTCTCAAAATTTCCAAGTATTATGAAAGCAAACGAAGCGAAGGGCAAGGGCAAAGTCTCAAGATACCGCTGAGCGAGTTTTCTCACGAGCTCTATAATGAAACACGAATAAGCTACTATAAAGCGAAAAGAAATGAATGCTTACGGCAAGTTAATGCAAAAAAAAAATTAGTAAAGGAAATCTACATTTAAACTT 204 6123352 0.964225743 32 184 958 0.90376569 1.73239376 0.138075314 0.137254902 0.263598326 204 20 3 216 2L:6123130-6123396 6 stai FBtr0079196|FBtr0079197|FBtr0304908|FBtr0079198|FBtr0333406 6123063|6123063|6123063|6123063|6123063 6123899|6124653|6124653|6123899|6123899 AGTTAA 6mer3-8 dme-miR-999-3p 2L + 6123131 6123373 3'utr stai FlyBase G1828.1 AAAAGAACAGCAACACTGCATAATACACCAACACATATTTAAGCAAGAAAACCCTTAAAACTGAAAACGATTTCTCAAAATTTCCAAGTATTATGAAAGCAAACGAAGCGAAGGGCAAGGGCAAAGTCTCAAGATACCGCTGAGCGAGTTTTCTCACGAGCTCTATAATGAAACACGAATAAGCTACTATAAAGCGAAAAGAAATGAATGCTTACGGCAAGTTAATGCAAAAAAAAAATTAGT 135 6123352 0.955968491 28 120 568 0.882022472 1.718778398 0.140449438 0.22962963 0.415730337 135 19 2 157 2L:6123131-6123373 6 48 845 FBgn0266521 1156.12 73.38 111.3866667 0.041518182 0.654129191 0.43093129 -2 -2 -2 0.01 dme-miR-33-5p 6mer2-7 AATGCA 2L 6123429 6123434 + 2L_6123429_6123434_+ 1 1 1 0 stai FBtr0333406|FBtr0079196|FBtr0079197|FBtr0304908|FBtr0079198 6123063|6123063|6123063|6123063|6123063 6123899|6123899|6124653|6124653|6123899 2L + 6123414 6123445 3'utr stai FlyBase G2301.1 AGCCTATGCAAGTTGAATGCATGCCTGTCATT 7 6123431 0.706712033 4 6 45 0.9 0.653212514 0 0.285714286 0.5 7 0 1 9 2L:6123414-6123445 6 stai FBtr0079196|FBtr0079197|FBtr0304908|FBtr0079198|FBtr0333406 6123063|6123063|6123063|6123063|6123063 6123899|6124653|6124653|6123899|6123899 AATGCA 6mer2-7 dme-miR-33-5p 2L + 6123412 6123442 3'utr stai FlyBase G1829.1 AAAGCCTATGCAAGTTGAATGCATGCCTGTC 7 6123426 0.710015409 3 5 32 0.833333333 1 0.25 0.571428571 0.75 7 2 0 10 2L:6123412-6123442 6 6 846 FBgn0266521 1156.12 73.38 111.3866667 0.005189773 0.081766149 0.053866411 -2 3 0.5 0.01 dme-miR-307a-3p 7mer-m8 GGTTGTG 2L 6331071 6331077 + 2L_6331071_6331077_+ 0.702972035 0.702972035 0.702972035 0 PDZ-GEF FBtr0333242|FBtr0300039|FBtr0079249|FBtr0300038 6330837|6330837|6330642|6330837 6332789|6331750|6331750|6331750 2L + 6331044 6331158 3'utr PDZ-GEF FlyBase G2335.1 CAGATAGAGTTGCCAAAATTTGTGAATGGTTGTGGTTTCAATTTCGCCAGCAATCAGAAACAACGTATCCCCGATCACCTTTACCCTTTACGGAGCTGCAAAAATATTACTAGCA 67 6331063 0.956289151 15 66 529 0.986842105 1.875061263 0.276315789 0.134328358 0.236842105 67 1 0 75 2L:6331044-6331158 7 PDZ-GEF FBtr0300038|FBtr0079249|FBtr0300039|FBtr0333242 6330837|6330642|6330837|6330837 6331750|6331750|6331750|6332789 GGTTGTG 7mer-m8 dme-miR-307a-3p 2L + 6331045 6331082 3'utr PDZ-GEF FlyBase G1853.1 AGATAGAGTTGCCAAAATTTGTGAATGGTTGTGGTTTC 16 6331070 0.659142935 5 14 141 0.894736842 0.929418926 0.368421053 0.1875 0.315789474 16 1 1 17 2L:6331045-6331082 7 23 847 FBgn0265778 1055.34 20.3 30.87333333 0.021793924 1.133004926 0.744979486 8 1 4.5 0.01 dme-miR-317-5p 7mer-m8 GTATCCC 2L 6331108 6331114 + 2L_6331108_6331114_+ 0.705949576 0.705949576 0.705949576 0 PDZ-GEF FBtr0333242|FBtr0300039|FBtr0079249|FBtr0300038 6330837|6330837|6330642|6330837 6332789|6331750|6331750|6331750 2L + 6331044 6331158 3'utr PDZ-GEF FlyBase G2335.1 CAGATAGAGTTGCCAAAATTTGTGAATGGTTGTGGTTTCAATTTCGCCAGCAATCAGAAACAACGTATCCCCGATCACCTTTACCCTTTACGGAGCTGCAAAAATATTACTAGCA 67 6331124 0.956289151 15 66 529 0.986842105 1.875061263 0.276315789 0.134328358 0.236842105 67 1 0 75 2L:6331044-6331158 7 PDZ-GEF FBtr0300038|FBtr0079249|FBtr0300039|FBtr0333242 6330837|6330642|6330837|6330837 6331750|6331750|6331750|6332789 GTATCCC 7mer-m8 dme-miR-317-5p 2L + 6331102 6331151 3'utr PDZ-GEF FlyBase G1854.1 AACAACGTATCCCCGATCACCTTTACCCTTTACGGAGCTGCAAAAATATT 24 6331124 0.76006693 7 24 156 1 1.591064607 0.179487179 0.375 0.615384615 24 0 0 39 2L:6331102-6331151 7 17 848 FBgn0265778 1055.34 20.3 30.87333333 0.016108553 0.837438424 0.550637011 -16 -16 -16 0.01 dme-miR-252-5p 6mer3-8 GTACTT 2L 6332132 6332137 + 2L_6332132_6332137_+ 1 1 1 0 PDZ-GEF FBtr0333242 6330837 6332789 2L + 6332079 6332185 3'utr PDZ-GEF FlyBase G2343.1 AAATCAAATCAAACGATATTGGATATGCTATATATGTATACATTGTGCTCTTTGTACTTTTAAGTTAGACTAAATACCAAATTTGCTTTTTAAGGCTTAAGAAAAAC 82 6332161 0.991359336 19 77 828 0.949494949 1.672097858 0.262626263 0.170731707 0.313131313 82 4 1 94 2L:6332079-6332185 6 PDZ-GEF FBtr0333242 6330837 6332789 GTACTT 6mer3-8 dme-miR-252-5p 2L + 6332056 6332201 3'utr PDZ-GEF FlyBase G1861.1 GCTGAATTCGAGAAAACAAAAACAAATCAAATCAAACGATATTGGATATGCTATATATGTATACATTGTGCTCTTTGTACTTTTAAGTTAGACTAAATACCAAATTTGCTTTTTAAGGCTTAAGAAAAACATTAGATCGAAGCCTA 58 6332121 0.990771662 22 55 562 0.975609756 1.903089987 0.158536585 0.310344828 0.512195122 58 2 0 80 2L:6332056-6332201 6 38 849 FBgn0265778 1055.34 20.3 30.87333333 0.036007353 1.871921182 1.230835673 -29 11 -9 0.01 dme-miR-980-5p 7mer-A1 AAAAACA 2L 6333081 6333087 - 2L_6333081_6333087_- 0.782911824 0.782911824 0.782911824 0 Pez FBtr0331226|FBtr0079284 6332879|6332879 6333292|6333292 2L - 6333041 6333116 3'utr Pez FlyBase G8065.1 AACTAGTTTTTAAGCTCTAGATTTGTTATAAAAACAGAACCCCCCACAATGGCCACTTTATAGATACATACATAAA 145 6333067 0.903951837 6 145 666 1 2.212187604 0.073619632 0.110344828 0.208588957 145 0 0 163 2L:6333041-6333116 7 Pez FBtr0331226|FBtr0079284 6332879|6332879 6333292|6333292 AAAAACA 7mer-A1 dme-miR-980-5p 2L - 6333041 6333087 3'utr Pez FlyBase G6275.1 AAAAACAGAACCCCCCACAATGGCCACTTTATAGATACATACATAAA 72 6333067 0.950859943 4 70 309 0.983050847 1.763427994 0.093220339 0.458333333 0.669491525 72 1 1 116 2L:6333041-6333087 7 68.5 850 FBgn0031799 375.3333333 10.13666667 15.53333333 0.18250444 6.757645511 4.409871245 -20 -20 -20 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 6333148 6333154 - 2L_6333148_6333154_- 0.658999527 0.658999527 0.658999527 0 Pez FBtr0331226|FBtr0079284 6332879|6332879 6333292|6333292 2L - 6333124 6333235 3'utr Pez FlyBase G8066.1 TTGTTTATATCGAACAAATTTCCTTTAGTTCTCGTTTTAAAAAATCAGTACAACTCCGTTCAGCAATTTTATATTTCTACTGGCAGCTGTTGTCCCTATAATCGTTAAATTT 483 6333155 0.990083965 23 458 4598 0.953982301 2.129528774 0.02300885 0.144927536 0.269026549 483 23 3 539 2L:6333124-6333235 7 Pez FBtr0331226|FBtr0079284 6332879|6332879 6333292|6333292 GGCAGCT 7mer-m8 dme-miR-980-3p 2L - 6333118 6333197 3'utr Pez FlyBase G6276.1 AAAAAATCAGTACAACTCCGTTCAGCAATTTTATATTTCTACTGGCAGCTGTTGTCCCTATAATCGTTAAATTTTAATAC 281 6333155 0.902582566 17 264 2648 0.93627451 2.104942108 0.046568627 0.341637011 0.546568627 281 24 2 382 2L:6333118-6333197 7 367 851 FBgn0031799 375.3333333 10.13666667 15.53333333 0.977797513 36.20519566 23.62660944 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 2L 6415192 6415199 + 2L_6415192_6415199_+ 0.64356572 0.64356572 0.64356572 0 CG13982 FBtr0079256 6414070 6415335 2L + 6415167 6415298 3'utr CG13982 FlyBase G2382.1 TTGTAAATTTTTAAGTTTAACTGATACCAAAGATTTATTTTGAAACTTGAATGTTACTCTCCATAGACTACATACTAGTATTTAAGTACGTTCACTATTTTCGCTGCACAGTAAATGTCATTTATTTGTGTC 115 6415191 0.903363832 21 113 864 0.984732824 2.11058971 0.022900763 0.113043478 0.221374046 115 2 0 129 2L:6415167-6415298 8 CG13982 FBtr0079256 6414070 6415335 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2L + 6415168 6415253 3'utr CG13982 FlyBase G1887.1 TGTAAATTTTTAAGTTTAACTGATACCAAAGATTTATTTTGAAACTTGAATGTTACTCTCCATAGACTACATACTAGTATTTAAGT 72 6415191 0.904059583 10 71 546 0.990291262 1.707570176 0 0.305555556 0.514563107 72 0 1 102 2L:6415168-6415253 8 80 852 FBgn0031811 23.7 1.106666667 1.73 3.375527426 72.28915663 46.24277457 1 1 1 0.01 dme-miR-283-5p 8mer-A1 TGATATTA 2L 6426138 6426145 + 2L_6426138_6426145_+ 0.379009304 0.59218447 0.485596887 0.15073763 Fic FBtr0079257 6426121 6426371 2L + 6426095 6426150 stop_codon Fic FlyBase G2390.1 CGAATCCGGATCTGGAGATCTACCGTGACCCATCTAGATGCATTGATATTAGACAA 27 6426136 0.722737755 9 27 167 1 1.491361694 0 0.148148148 0.258064516 27 0 0 31 2L:6426095-6426150 8 Fic FBtr0079257 6426121 6426371 TGATATTA 8mer-A1 dme-miR-283-5p 2L + 6426090 6426149 stop_codon Fic FlyBase G1891.1 TTCTACGAATCCGGATCTGGAGATCTACCGTGACCCATCTAGATGCATTGATATTAGACA 16 6426137 0.970407041 7 16 91 1 1.361727836 0.130434783 0.375 0.565217391 16 0 0 23 2L:6426090-6426149 8 14 853 FBgn0263278 143.1166667 8.97 13.60333333 0.09782229 1.560758082 1.02915952 2 1 1.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-m8 CTGTGAT 2L 6426260 6426266 + 2L_6426260_6426266_+ 0.661615693 0.661615693 0.661615693 0 Fic FBtr0079257|FBtr0079257|FBtr0079257 6426121|6426121|6426121 6426371|6426371|6426371 2L + 6426243 6426308 3'utr Fic FlyBase G2392.1 AAAATAACGATGTAATTCTGTGATCATATTTAAGCTAAAAGACAACCAAAAAATGTACATAATGCA 237 6426259 0.854317163 13 218 1974 0.93220339 1.962211439 0.06440678 0.219409283 0.372881356 237 18 2 275 2L:6426243-6426308 7 Fic FBtr0079257|FBtr0079257|FBtr0079257 6426121|6426121|6426121 6426371|6426371|6426371 CTGTGAT 7mer-m8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 6426241 6426318 3'utr Fic FlyBase G1893.1 GAAAAATAACGATGTAATTCTGTGATCATATTTAAGCTAAAAGACAACCAAAAAATGTACATAATGCACAATCCAACT 151 6426258 0.933418858 14 139 1229 0.922018349 1.604226053 0.050458716 0.298013245 0.513761468 151 13 4 201 2L:6426241-6426318 7 174.5 854 FBgn0263278 143.1166667 8.97 13.60333333 1.219284966 19.45373467 12.8277383 1 2 1.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 6448483 6448489 - 2L_6448483_6448489_- 0.458326692 0.801963793 0.630145242 0.242988124 retm FBtr0339788|FBtr0339788|FBtr0339788 6448462|6448462|6448462 6449851|6449851|6449851 2L - 6448467 6448513 3'utr retm FlyBase G8125.1 AAACATTTTGTGAAAACATTGAATTGTGATATTAAAGAAAATTAAAC 46 6448490 0.69888334 6 44 372 0.963636364 1.423245874 0.272727273 0.152173913 0.290909091 46 1 1 53 2L:6448467-6448513 7 retm FBtr0339788|FBtr0339788|FBtr0339788 6448462|6448462|6448462 6449851|6449851|6449851 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 6448467 6448509 3'utr retm FlyBase G6317.1 ATTTTGTGAAAACATTGAATTGTGATATTAAAGAAAATTAAAC 24 6448491 0.716369219 5 22 187 0.921052632 1.544068044 0.526315789 0.416666667 0.631578947 24 3 0 35 2L:6448467-6448509 7 34 855 FBgn0031814 365.7 13.12 20.05 0.092972382 2.591463415 1.695760599 1 2 1.5 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 2L 6449315 6449320 - 2L_6449315_6449320_- 1 1 1 0 retm FBtr0329951|FBtr0339788|FBtr0079272 6448804|6448462|6448804 6449707|6449851|6449851 2L - 6449204 6449320 3'utr retm FlyBase G8127.2 GAAAAAATTGAAATTGTAATCAATAACTACGTGTTACCTAATTAGTTTAATAAACAAATTGCCGAAATGGCTTATTGCAAGGATTTTAGCCAGAACTTATACAAAAGAGTGAAATGT 164 6449291 0.71996675 24 157 1296 0.945945946 1.397940009 0.064864865 0.12804878 0.227027027 164 4 6 175 2L:6449204-6449320 6 retm FBtr0329951|FBtr0339788|FBtr0079272 6448804|6448462|6448804 6449707|6449851|6449851 GAAAAA 6mer3-8 dme-miR-980-5p 2L - 6449195 6449324 3'utr retm FlyBase G6319.2 AATAGAAAAAATTGAAATTGTAATCAATAACTACGTGTTACCTAATTAGTTTAATAAACAAATTGCCGAAATGGCTTATTGCAAGGATTTTAGCCAGAACTTATACAAAAGAGTGAAATGTAAGATTTGA 103 6449291 0.906631751 22 100 804 0.97826087 1.829303773 0.043478261 0.27184466 0.456521739 103 2 1 135 2L:6449195-6449324 6 3 856 FBgn0031814 365.7 13.12 20.05 0.008203445 0.228658537 0.149625935 -29 -29 -29 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 2L 6449682 6449687 - 2L_6449682_6449687_- 1 1 1 0 retm FBtr0329951|FBtr0339788|FBtr0079272 6448804|6448462|6448804 6449707|6449851|6449851 2L - 6449615 6449702 3'utr retm FlyBase G8130.1 AAAGTGGTAATATCTTGTGTTTTAGTTGTCTTTAGTTGTTTAGCAGAATGTTAGTTTGATTTTAAATTGTATTTAGCTCAAATAGGCC 62 6449688 0.71880178 19 57 754 0.909090909 1.146128036 0.324675325 0.193548387 0.350649351 62 3 4 70 2L:6449615-6449702 6 retm FBtr0329951|FBtr0339788|FBtr0079272 6448804|6448462|6448804 6449707|6449851|6449851 TGTGTT 6mer3-8 dme-miR-317-3p 2L - 6449640 6449702 3'utr retm FlyBase G6323.1 AAAGTGGTAATATCTTGTGTTTTAGTTGTCTTTAGTTGTTTAGCAGAATGTTAGTTTGATTTT 47 6449688 0.995314682 8 41 596 0.888888889 0.954242509 0.320987654 0.468085106 0.691358025 47 2 7 72 2L:6449640-6449702 6 45.5 857 FBgn0031814 365.7 13.12 20.05 0.124418923 3.467987805 2.269326683 1 1 1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 6458922 6458927 + 2L_6458922_6458927_+ 1 1 1 0 frj FBtr0079258|FBtr0079258|FBtr0079258|FBtr0079259|FBtr0079259|FBtr0079259 6458584|6458584|6458584|6458584|6458584|6458584 6459008|6459008|6459008|6459008|6459008|6459008 2L + 6458778 6458990 3'utr frj FlyBase G2401.2 TGGTCTTGTTACGCCTTCTACCCGCTTCCATCCGCACTTCTTCTGGGGAAGGTGATGATATTGATATGGATAAAATCTAAAATTAGATGCTAAAAAGTTACTAAAGAAATTTTATTATAGATATACATATATTTTAACCAAAGCCTGTGAAATTGGAGTCAAAAGTTATAGAAATATAAAATCCCAATATGATCATTCAATTGAAAACTATAA 337 6458931 0.821206713 30 324 1929 0.968992248 1.728933228 0.175710594 0.127596439 0.240310078 337 6 6 375 2L:6458778-6458990 6 frj FBtr0079258|FBtr0079258|FBtr0079258|FBtr0079259|FBtr0079259|FBtr0079259 6458584|6458584|6458584|6458584|6458584|6458584 6459008|6459008|6459008|6459008|6459008|6459008 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 6458902 6458979 3'utr frj FlyBase G1898.1 ACATATATTTTAACCAAAGCCTGTGAAATTGGAGTCAAAAGTTATAGAAATATAAAATCCCAATATGATCATTCAATT 110 6458931 0.792500794 6 104 612 0.949367089 2.176091259 0.101265823 0.336363636 0.537974684 110 8 0 150 2L:6458902-6458979 6 138 858 FBgn0031815 339.3333333 19.62666667 29.88333333 0.406679764 7.03125 4.617958728 -9 -9 -9 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 6468697 6468704 - 2L_6468697_6468704_- 0.500120318 0.500120318 0.500120318 0 mmy FBtr0079269|FBtr0079268|FBtr0339787 6468536|6468589|6468536 6468844|6468844|6468844 2L - 6468649 6468754 3'utr mmy FlyBase G8151.1 TTTATGATTCCCCAAACTGTAGTTAGTGCACGGAAATTCCATTGATTTCAGTACTTAAAGGAGACTTGTAAAAATTTGTTACCTATTGTGTCCGTTGATTTATTTT 30 6468712 0.818240221 15 30 265 1 1.556302501 0.305555556 0.166666667 0.305555556 30 0 0 36 2L:6468649-6468754 8 mmy FBtr0079268|FBtr0339787|FBtr0079269 6468589|6468536|6468536 6468844|6468844|6468844 GTACTTAA 8mer-A1 dme-miR-252-5p 2L - 6468656 6468751 3'utr mmy FlyBase G6333.1 ATGATTCCCCAAACTGTAGTTAGTGCACGGAAATTCCATTGATTTCAGTACTTAAAGGAGACTTGTAAAAATTTGTTACCTATTGTGTCCGTTGAT 33 6468713 0.836333334 12 32 237 0.976190476 1.612783857 0.142857143 0.272727273 0.428571429 33 1 0 41 2L:6468656-6468751 8 16.5 859 FBgn0259749 867.8133333 52.42 80.18333333 0.019013305 0.314765357 0.205778424 8 9 8.5 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 2L 6468812 6468818 - 2L_6468812_6468818_- 0.823349562 0.823349562 0.823349562 0 mmy FBtr0079269|FBtr0079268|FBtr0339787 6468536|6468589|6468536 6468844|6468844|6468844 2L - 6468788 6468947 stop_codon mmy FlyBase G8152.1 CACCTACGCCGGCGAGAATCTCGCCTCGCATGTGGAGGGCAAGTCGTTCACCAGTCCCGTCTACCTGCGGGACAGCCGCGATCCCTTGCACGGACACCTTTAAGATGTAGGGGATCTGCATGGACGCATAGACTGATGGACGGATAGTAGTCGTTTCGAT 497 6468811 0.8549048 13 488 1787 0.982200647 2.306067436 0.283171521 0.197183099 0.354368932 497 9 2 607 2L:6468788-6468947 7 mmy FBtr0079268|FBtr0339787|FBtr0079269 6468589|6468536|6468536 6468844|6468844|6468844 AGACTGA 7mer-A1 dme-miR-14-3p 2L - 6468787 6468846 stop_codon mmy FlyBase G6334.1 AAGATGTAGGGGATCTGCATGGACGCATAGACTGATGGACGGATAGTAGTCGTTTCGATT 408 6468811 0.817033383 8 398 1449 0.979073244 2.214181309 0.255605381 0.455882353 0.668161435 408 11 3 655 2L:6468787-6468846 7 433 860 FBgn0259749 867.8133333 52.42 80.18333333 0.498955228 8.260206028 5.400124714 -7 -7 -7 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 2L 6474464 6474469 - 2L_6474464_6474469_- 1 1 1 0 CG9536 FBtr0303229|FBtr0079267 6474436|6474436 6474798|6474798 2L - 6474453 6474494 3'utr CG9536 FlyBase G8161.1 TGTAATTGAAAATGATGCTTTATTTAGTTAATAACTGTAAAT 44 6474474 0.688109184 9 39 472 0.901960784 1.361727836 0.137254902 0.159090909 0.274509804 44 4 1 46 2L:6474453-6474494 6 CG9536 FBtr0303229|FBtr0079267 6474436|6474436 6474798|6474798 AGTTAA 6mer3-8 dme-miR-999-3p 2L - 6474455 6474539 3'utr CG9536 FlyBase G6340.1 CTAGAGCCCTTACATAGATGCATACTTTCTGTTGTAGTCCTTACATGTAATTGAAAATGATGCTTTATTTAGTTAATAACTGTAA 45 6474472 0.807463949 17 36 465 0.788732394 0.84509804 0.267605634 0.422222222 0.633802817 45 8 7 56 2L:6474455-6474539 6 33 861 FBgn0031818 366.33 22.85 34.65666667 0.090082712 1.444201313 0.952197749 5 3 4 0.01 dme-miR-965-3p 7mer-m8 TACGCTT 2L 6474632 6474638 - 2L_6474632_6474638_- 0.620204855 0.620204855 0.620204855 0 CG9536 FBtr0303229|FBtr0079267 6474436|6474436 6474798|6474798 2L - 6474610 6474704 3'utr CG9536 FlyBase G8162.1 CGTACCCCCCATCAGTGTTCCCATTTTGTAATTACCGTTCGTGTGTTTCGTAGTGTCCTGTAGACTTACGCTTGCTTGCTGCGCACACCGCCGGC 44 6474639 0.985849807 16 41 374 0.921568627 1.194976603 0.254901961 0.136363636 0.254901961 44 2 2 47 2L:6474610-6474704 7 CG9536 FBtr0303229|FBtr0079267 6474436|6474436 6474798|6474798 TACGCTT 7mer-m8 dme-miR-965-3p 2L - 6474588 6474655 3'utr CG9536 FlyBase G6341.1 GTAGTGTCCTGTAGACTTACGCTTGCTTGCTGCGCACACCGCCGGCCATGCTGCTAGGAGCGGCGGAG 24 6474639 0.979784162 6 23 186 0.933333333 1.021189299 0.066666667 0.541666667 0.755555556 24 0 3 42 2L:6474588-6474655 7 25.5 862 FBgn0031818 366.33 22.85 34.65666667 0.069609369 1.115973742 0.73578917 1 1 1 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 6474746 6474751 - 2L_6474746_6474751_- 1 1 1 0 CG9536 FBtr0303229|FBtr0079267 6474436|6474436 6474798|6474798 2L - 6474710 6474774 3'utr CG9536 FlyBase G8163.1 TGAATTTTTGATATTTAAACGAATGATCTAATGATTTACGCCCATGTTTTGTATGATTCTGCATC 47 6474751 0.82828254 11 47 400 1 1.740362689 0.109090909 0.127659574 0.254545455 47 0 0 55 2L:6474710-6474774 6 CG9536 FBtr0303229|FBtr0079267 6474436|6474436 6474798|6474798 TGATCT 6mer3-8 dme-bantam-3p 2L - 6474662 6474783 3'utr CG9536 FlyBase G6342.1 ATATATTAATGAATTTTTGATATTTAAACGAATGATCTAATGATTTACGCCCATGTTTTGTATGATTCTGCATCAAGTACGTACCCCCCATCAGTGTTCCCATTTTGTAATTACCGTTCGTG 43 6474751 0.989597655 12 38 352 0.923076923 1.079181246 0.107692308 0.325581395 0.553846154 43 1 4 60 2L:6474662-6474783 6 28.5 863 FBgn0031818 366.33 22.85 34.65666667 0.077798706 1.24726477 0.822352602 0 0 0 0.01 dme-miR-8-3p 7mer-A1 AGTATTA 2L 6496169 6496175 + 2L_6496169_6496175_+ 0.823349562 0.823349562 0.823349562 0 CG31638 FBtr0079262|FBtr0113411 6496064|6496119 6496988|6496988 2L + 6496104 6496177 3'utr CG31638 FlyBase G2444.1 AGGGTAACAGCGACTAGGATAACCAGACAAAAGACATTTGAGAGACATTAATGGTATTAACCTTAAGTATTAAT 27 6496141 0.960003618 11 27 137 1 1.505149978 0.21875 0.185185185 0.3125 27 0 0 32 2L:6496104-6496177 7 CG31638 FBtr0113411|FBtr0079262 6496119|6496064 6496988|6496988 AGTATTA 7mer-A1 dme-miR-8-3p 2L + 6496119 6496178 3'utr CG31638 FlyBase G1928.1 AGGATAACCAGACAAAAGACATTTGAGAGACATTAATGGTATTAACCTTAAGTATTAATT 18 6496142 0.675725676 9 17 114 0.954545455 1.021189299 0.136363636 0.166666667 0.318181818 18 0 1 21 2L:6496119-6496178 7 5.5 864 FBgn0051638 490.34 20.43333333 31.29333333 0.011216707 0.269168026 0.175756285 28 27 27.5 0.01 dme-miR-970-3p 8mer-A1 TCTTATGA 2L 6496452 6496459 + 2L_6496452_6496459_+ 0.630790218 0.630790218 0.630790218 0 CG31638 FBtr0079262|FBtr0113411 6496064|6496119 6496988|6496988 2L + 6496441 6496492 3'utr CG31638 FlyBase G2447.1 GCTGGCCATATTCTTATGAGCTTAACCCGCAGCTAAGACGGTTGTTAGGAGG 15 6496451 0.779152902 4 14 102 0.9375 1.176091259 0.3125 0.066666667 0.125 15 1 0 15 2L:6496441-6496492 8 CG31638 FBtr0113411|FBtr0079262 6496119|6496064 6496988|6496988 TCTTATGA 8mer-A1 dme-miR-970-3p 2L + 6496441 6496472 3'utr CG31638 FlyBase G1929.1 GCTGGCCATATTCTTATGAGCTTAACCCGCAG 7 6496451 0.724868643 2 7 46 1 0.954242509 0.555555556 0.285714286 0.444444444 7 0 0 9 2L:6496441-6496472 8 9.5 865 FBgn0051638 490.34 20.43333333 31.29333333 0.019374312 0.464926591 0.303579037 1 1 1 0.01 dme-miR-263a-5p 6mer3-8 GTGCCA 2L 6496629 6496634 + 2L_6496629_6496634_+ 1 0.999999531 0.999999766 3.54E-07 CG31638 FBtr0079262|FBtr0113411 6496064|6496119 6496988|6496988 2L + 6496612 6496639 3'utr CG31638 FlyBase G2449.1 TTGCGGAATAGCATTTAGTGCCAGAAAT 14 6496630 0.907088606 2 14 71 1 1.278753601 0.315789474 0.285714286 0.473684211 14 0 0 19 2L:6496612-6496639 6 CG31638 FBtr0113411|FBtr0079262 6496119|6496064 6496988|6496988 GTGCCA 6mer3-8 dme-miR-263a-5p 2L + 6496586 6496636 3'utr CG31638 FlyBase G1931.1 ATTGAAGCATAATACAGGTTCGATGTTTGCGGAATAGCATTTAGTGCCAGA 6 6496629 0.95297376 4 6 31 1 0.903089987 0.375 0.333333333 0.5 6 0 0 8 2L:6496586-6496636 6 9 866 FBgn0051638 490.34 20.43333333 31.29333333 0.018354611 0.44045677 0.287601193 -1 0 -0.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 6496814 6496819 + 2L_6496814_6496819_+ 1 1 1 0 CG31638 FBtr0079262|FBtr0113411 6496064|6496119 6496988|6496988 2L + 6496745 6496825 3'utr CG31638 FlyBase G2450.1 ATTTTTGCAGTTGCCTAGTCCGAAATTCTTTTAGTTTTTCAAAAGTCTATCGATATTCAGCGGCATAGTTGATCTTTTACA 30 6496821 0.977348276 9 28 235 0.928571429 1.290034611 0 0.3 0.5 30 2 1 39 2L:6496745-6496825 6 CG31638 FBtr0113411|FBtr0079262 6496119|6496064 6496988|6496988 TGATCT 6mer3-8 dme-bantam-3p 2L + 6496795 6496825 3'utr CG31638 FlyBase G1932.1 CGATATTCAGCGGCATAGTTGATCTTTTACA 21 6496821 0.634827359 4 20 154 0.911764706 1.491361694 0 0.380952381 0.617647059 21 3 0 31 2L:6496795-6496825 6 23 867 FBgn0051638 490.34 20.43333333 31.29333333 0.046906228 1.125611746 0.734980827 -7 -7 -7 0.01 dme-miR-318-3p 7mer-A1 CCAGTGA 2L 6526509 6526515 + 2L_6526509_6526515_+ 0.823349562 0.823349562 0.823349562 0 CG31637 FBtr0079287|FBtr0343155 6526013|6526013 6526996|6526919 2L + 6526490 6526536 3'utr CG31637 FlyBase G2458.1 TTTGGCTTAACAATGAAATCCAGTGATTTAGCATATAACAACCAAAA 279 6526517 0.699895692 4 277 1714 0.994252874 2.539076099 0.037356322 0.204301075 0.362068966 279 2 0 346 2L:6526490-6526536 7 CG31637 FBtr0343155|FBtr0079287 6526013|6526013 6526919|6526996 CCAGTGA 7mer-A1 dme-miR-318-3p 2L + 6526444 6526535 3'utr CG31637 FlyBase G1937.2 TACTTGGCTTTTTGATGTAAATTATTTAGGCAAACAACTTTTGTAATTTGGCTTAACAATGAAATCCAGTGATTTAGCATATAACAACCAAA 233 6526517 0.974547279 8 231 1439 0.994382022 2.549003262 0.061797753 0.394849785 0.603932584 233 2 0 354 2L:6526444-6526535 7 254 868 FBgn0051637 828.8433333 37.8 57.83 0.306451159 6.71957672 4.392183988 -8 -8 -8 0.01 dme-miR-965-3p 7mer-A1 ACGCTTA 2L 6564093 6564099 + 2L_6564093_6564099_+ 0.823349562 0.823349562 0.823349562 0 Ent2 FBtr0343158|FBtr0079290 6564072|6564072 6564709|6564396 2L + 6564077 6564117 3'utr Ent2 FlyBase G2469.1 TACATTTATTAGTATGACGCTTACTAACAATTTTCATTGTT 9 6564091 0.987977865 4 9 79 1 1 0 0.111111111 0.2 9 0 0 10 2L:6564077-6564117 7 Ent2 FBtr0343158|FBtr0079290 6564072|6564072 6564709|6564396 ACGCTTA 7mer-A1 dme-miR-965-3p 2L + 6564080 6564114 3'utr Ent2 FlyBase G1945.1 ATTTATTAGTATGACGCTTACTAACAATTTTCATT 6 6564091 0.674662479 3 6 54 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 2L:6564080-6564114 7 7 869 FBgn0263916 786.86 45.64666667 69.53333333 0.008896119 0.153351833 0.100671141 2 2 2 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2L 6564318 6564323 + 2L_6564318_6564323_+ 1 1 1 0 Ent2 FBtr0343158|FBtr0079290 6564072|6564072 6564709|6564396 2L + 6564248 6564336 3'utr Ent2 FlyBase G2470.1 ATTTTAATAATATGGTGTCTAATATTTCATAGTTAGACTGCACACACATAAATTTAGTTTTGCGCTCAATTCTAGTTCTAGGACTAATC 14 6564317 0.985731552 6 14 121 1 1.204119983 0.125 0.142857143 0.25 14 0 0 16 2L:6564248-6564336 6 Ent2 FBtr0343158|FBtr0079290 6564072|6564072 6564709|6564396 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2L + 6564295 6564335 3'utr Ent2 FlyBase G1947.1 ATAAATTTAGTTTTGCGCTCAATTCTAGTTCTAGGACTAAT 6 6564317 0.987218298 2 6 52 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2L:6564295-6564335 6 7 870 FBgn0263916 786.86 45.64666667 69.53333333 0.008896119 0.153351833 0.100671141 1 1 1 0.01 dme-miR-1008-3p 8mer-A1 AGCTGTGA 2L 6564580 6564587 - 2L_6564580_6564587_- 0.643565469 0.643565468 0.643565469 0 CG13766 FBtr0343161|FBtr0079330 6564110|6564361 6565169|6565169 2L - 6564544 6564608 3'utr CG13766 FlyBase G8188.1 TTATTTCATTCAATCGGATGAAGCTGTGATAAAACGAACCAAATATTCCATTGACTTGTTAGACC 21 6564590 0.77547647 8 19 137 0.916666667 1.041392685 0.083333333 0.095238095 0.208333333 21 1 1 22 2L:6564544-6564608 8 CG13766 FBtr0079330|FBtr0343161 6564361|6564110 6565169|6565169 AGCTGTGA 8mer-A1 dme-miR-1008-3p 2L - 6564540 6564609 3'utr CG13766 FlyBase G6370.1 GTTATTTCATTCAATCGGATGAAGCTGTGATAAAACGAACCAAATATTCCATTGACTTGTTAGACCCCCT 24 6564590 0.862002143 7 17 119 0.625 0.920818754 0.3 0.458333333 0.675 24 13 2 25 2L:6564540-6564609 8 15.5 871 FBgn0031834 61.51666667 4.113333333 6.276666667 0.251964237 3.768233387 2.469463622 3 3 3 0.01 dme-miR-283-5p 6mer3-8 TGATAT 2L 6565065 6565070 - 2L_6565065_6565070_- 1 1 1 0 CG13766 FBtr0343161|FBtr0079330 6564110|6564361 6565169|6565169 2L - 6565020 6565086 3'utr CG13766 FlyBase G8192.1 AAGTGACAAGTGGAACTGATATGTTTATCTGCTACTAGCTGCTCCCACGGTAATTATGTGTCTTCTC 44 6565076 0.972327388 5 43 258 0.983606557 1.77815125 0.081967213 0.272727273 0.475409836 44 1 0 60 2L:6565020-6565086 6 CG13766 FBtr0079330|FBtr0343161 6564361|6564110 6565169|6565169 TGATAT 6mer3-8 dme-miR-283-5p 2L - 6565055 6565086 3'utr CG13766 FlyBase G6372.2 AAGTGACAAGTGGAACTGATATGTTTATCTGC 39 6565076 0.936119819 3 34 229 0.841269841 1.122215878 0.253968254 0.487179487 0.682539683 39 7 3 53 2L:6565055-6565086 6 39.5 872 FBgn0031834 61.51666667 4.113333333 6.276666667 0.642102411 9.602917342 6.29314923 6 6 6 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 6616826 6616831 + 2L_6616826_6616831_+ 1 1 1 0 CG11050 FBtr0079291|FBtr0079293|FBtr0079292 6616512|6616512|6616512 6617117|6617117|6617117 2L + 6616785 6616890 3'utr CG11050 FlyBase G2486.1 AAGCGTAAAGTTGCGGATCGAATTCTATCGATATATTCAATTGATCTGACTAAGGAATCCAATTGTAAATAACTTAAACGAATTGTAGACTATTTAGAAAAAAATT 152 6616825 0.87082934 20 145 1160 0.957219251 1.65079304 0.07486631 0.210526316 0.35828877 152 5 3 179 2L:6616785-6616890 6 CG11050 FBtr0079292|FBtr0079293|FBtr0079291 6616512|6616512|6616512 6617117|6617117|6617117 TGATCT 6mer3-8 dme-bantam-3p 2L + 6616808 6616893 3'utr CG11050 FlyBase G1965.1 TCTATCGATATATTCAATTGATCTGACTAAGGAATCCAATTGTAAATAACTTAAACGAATTGTAGACTATTTAGAAAAAAATTATT 99 6616825 0.927291471 8 95 772 0.97260274 2.152288344 0.061643836 0.373737374 0.575342466 99 4 0 142 2L:6616808-6616893 6 85.5 873 FBgn0031836 528.79 32.3 48.86333333 0.161689896 2.647058824 1.749778293 1 1 1 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 6633068 6633075 - 2L_6633068_6633075_- 0.500120318 0.500120318 0.500120318 0 CG31635 FBtr0331191|FBtr0331187 6632796|6632796 6634810|6634810 2L - 6633006 6633125 3'utr CG31635 FlyBase G8197.1 TGTTTCAACGTATCTTCATCAGTTAAGTGGAATTACTTAAAAAATGTACTGTACTTAATTTACAAATAGTTGATATTTCTGGTGCTTACCGGTCGCTAGAAGTTTGCCTTAAACTAGATC 79 6633076 0.790901547 18 76 710 0.966666667 1.939519253 0.088888889 0.139240506 0.244444444 79 3 0 87 2L:6633006-6633125 8 CG31635 FBtr0331187|FBtr0331191 6632796|6632796 6634810|6634810 GTACTTAA 8mer-A1 dme-miR-252-5p 2L - 6632999 6633091 3'utr CG31635 FlyBase G6376.1 ACTTAAAAAATGTACTGTACTTAATTTACAAATAGTTGATATTTCTGGTGCTTACCGGTCGCTAGAAGTTTGCCTTAAACTAGATCCCCGTTT 38 6633076 0.989174555 5 36 344 0.965517241 1.447158031 0.034482759 0.394736842 0.603448276 38 1 1 56 2L:6632999-6633091 8 44 874 FBgn0051635 607.7033333 10.19333333 15.53666667 0.07240375 4.316546763 2.832010298 1 1 1 0.01 dme-bantam-3p 8mer-A1 TGATCTCA 2L 6633661 6633668 - 2L_6633661_6633668_- 0.631136385 0.631136385 0.631136385 0 CG31635 FBtr0331191|FBtr0331187 6632796|6632796 6634810|6634810 2L - 6633592 6633723 3'utr CG31635 FlyBase G8200.1 TTAACAACGGAAATGAAGCGCAAACGAAAACAAAAGTACCCAAAATAAATCCAATTGATCTCATTATGTGATATTTGTCGTAGTGCCCAAAGCGTTCACTGTACGTGTATCTATAACCAAACCATACCATAT 484 6633669 0.989510946 23 450 4377 0.931389365 2.035829825 0.015437393 0.17768595 0.317324185 484 36 4 543 2L:6633592-6633723 8 CG31635 FBtr0331187|FBtr0331191 6632796|6632796 6634810|6634810 TGATCTCA 8mer-A1 dme-bantam-3p 2L - 6633542 6633721 3'utr CG31635 FlyBase G6379.1 AACAACGGAAATGAAGCGCAAACGAAAACAAAAGTACCCAAAATAAATCCAATTGATCTCATTATGTGATATTTGTCGTAGTGCCCAAAGCGTTCACTGTACGTGTATCTATAACCAAACCATACCATATGAGTTAAGTACAGGGTGTGTACATTCGAACACTTTTGCTCTAAGTAAACT 369 6633669 0.987791287 26 340 3224 0.919847328 1.984077034 0.04389313 0.319783198 0.520992366 369 38 4 482 2L:6633542-6633721 8 394.5 875 FBgn0051635 607.7033333 10.19333333 15.53666667 0.649165437 38.70176586 25.39154688 1 1 1 0.01 dme-miR-252-5p 7mer-m8 GTACTTA 2L 6634160 6634166 - 2L_6634160_6634166_- 0.588299917 0.588299917 0.588299917 0 CG31635 FBtr0331191|FBtr0331187 6632796|6632796 6634810|6634810 2L - 6634134 6634185 3'utr CG31635 FlyBase G8202.1 TCGTGTGGATGAAAAATTTGTACTTACCGATTCAAATGAATACTTACTGAAA 14 6634167 0.986717499 4 13 106 0.9375 1.176091259 0.6875 0.071428571 0.1875 14 1 0 15 2L:6634134-6634185 7 CG31635 FBtr0331187|FBtr0331191 6632796|6632796 6634810|6634810 GTACTTA 7mer-m8 dme-miR-252-5p 2L - 6634147 6634184 3'utr CG31635 FlyBase G6381.1 CGTGTGGATGAAAAATTTGTACTTACCGATTCAAATGA 11 6634167 0.70245094 3 11 86 1 1.230448921 0.294117647 0.454545455 0.647058824 11 0 0 17 2L:6634147-6634184 7 11.5 876 FBgn0051635 607.7033333 10.19333333 15.53666667 0.018923707 1.128188358 0.74018451 1 1 1 0.01 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 6635598 6635605 - 2L_6635598_6635605_- 0.63113665 0.63113665 0.63113665 0 CG31635 FBtr0079326|FBtr0331188|FBtr0331189|FBtr0331190 6635543|6635543|6635543|6635543 6635647|6635647|6635647|6635647 2L - 6635560 6635624 5'utr CG31635 FlyBase G8204.1 TATATACAAAGGGGATAATTCTAGTCATAAAGGAACCATAATATTTGAAGAATTCTCTATAAATG 125 6635606 0.700874894 8 121 720 0.950704225 1.653212514 0.232394366 0.112 0.218309859 125 5 2 135 2L:6635560-6635624 8 CG31635 FBtr0331188|FBtr0079326|FBtr0331190|FBtr0331189 6635543|6635543|6635543|6635543 6635647|6635647|6635647|6635647 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 6635564 6635619 5'utr CG31635 FlyBase G6382.1 ACAAAGGGGATAATTCTAGTCATAAAGGAACCATAATATTTGAAGAATTCTCTATA 52 6635606 0.973309407 6 47 288 0.915492958 1.210853365 0.197183099 0.346153846 0.521126761 52 3 3 65 2L:6635564-6635619 8 85.5 877 FBgn0051635 607.7033333 10.19333333 15.53666667 0.14069365 8.387835186 5.50311092 1 1 1 0.01 dme-miR-283-5p 6mer3-8 TGATAT 2L 6654530 6654535 + 2L_6654530_6654535_+ 1 1 1 0 Tango1 FBtr0079295|FBtr0343864 6654332|6654332 6654574|6654574 2L + 6654458 6654537 3'utr Tango1 FlyBase G2500.1 AACCGATTCCCCAAAACAGGGATCTCAGGAGAGTTCGTGAACAACTAAGAAAACTCCTGTCTCAGCGGTGAATGATATCC 11 6654515 0.958828767 6 9 48 0.818181818 0.954242509 0.181818182 0 0 11 2 0 9 2L:6654458-6654537 6 Tango1 FBtr0079295|FBtr0343864 6654332|6654332 6654574|6654574 TGATAT 6mer3-8 dme-miR-283-5p 2L + 6654497 6654540 3'utr Tango1 FlyBase G1972.1 AACAACTAAGAAAACTCCTGTCTCAGCGGTGAATGATATCCAAG 11 6654515 0.949352685 5 11 49 1 1.301029996 0.6 0.545454545 0.75 11 0 0 20 2L:6654497-6654540 6 4.5 878 FBgn0031842 1588.913333 40.97333333 62.80333333 0.002832124 0.10982753 0.071652248 15 15 15 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2L 6654850 6654855 - 2L_6654850_6654855_- 1 0.999999986 0.999999993 0 CG31633 FBtr0079325 6654758 6654896 2L - 6654826 6654867 3'utr CG31633 FlyBase G8227.1 TTATCTAAACGGACCAAAATTGTGCTATTTAATTGATAAGTC 31 6654848 0.837298057 4 28 227 0.916666667 1.51851394 0.083333333 0.096774194 0.222222222 31 3 0 33 2L:6654826-6654867 6 CG31633 FBtr0079325 6654758 6654896 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 6654811 6654866 3'utr CG31633 FlyBase G6398.1 TATCTAAACGGACCAAAATTGTGCTATTTAATTGATAAGTCTTTCGTCGATAAGCT 32 6654848 0.981663063 6 31 233 0.957446809 1.176091259 0.106382979 0.40625 0.595744681 32 0 2 45 2L:6654811-6654866 6 30.5 879 FBgn0051633 90.66666667 7.633333333 11.67 0.336397059 3.995633188 2.613538989 -7 -7 -7 0.01 dme-miR-317-3p 8mer-A1 TGTGTTCA 2L 6661963 6661970 + 2L_6661963_6661970_+ 0.631136783 0.631136783 0.631136783 0 CG11070 FBtr0079297 6661698 6662033 2L + 6661921 6661994 3'utr CG11070 FlyBase G2512.1 AATAACATGCAAAGGATAAATTATTGTAGTCATATTTGGTTTTGTGTTCACAATATGTTTACATATATGTTTAA 29 6661962 0.992589672 8 28 324 0.970588235 1.217483944 0.058823529 0.137931034 0.264705882 29 0 1 33 2L:6661921-6661994 8 CG11070 FBtr0079297 6661698 6662033 TGTGTTCA 8mer-A1 dme-miR-317-3p 2L + 6661921 6661994 3'utr CG11070 FlyBase G1988.1 AATAACATGCAAAGGATAAATTATTGTAGTCATATTTGGTTTTGTGTTCACAATATGTTTACATATATGTTTAA 21 6661962 0.957462311 4 20 220 0.944444444 1.531478917 0.111111111 0.571428571 0.75 21 2 0 34 2L:6661921-6661994 8 21 880 FBgn0028467 522.98 18.67666667 28.61666667 0.040154499 1.124397644 0.73383809 1 1 1 0.01 dme-miR-317-3p 8mer-A1 TGTGTTCA 2L 6674670 6674677 + 2L_6674670_6674677_+ 0.631136783 0.631136783 0.631136783 0 CG34310 FBtr0346453|FBtr0333516 6674524|6674524 6674780|6674780 2L + 6674496 6674706 stop_codon CG34310 FlyBase G2535.1 GAGTCAAGACCCAAACGGAGCGAATATTGAGCCAAGGCTGCCAGTGCCGTCATAGACATCTTTACATACTTATAGCCTAGTGATTAGTTACCAAATTTCAACGCTGTAACATGGTGAACAATGAATGGACTTTTACTTTCTTACCTTCACTTTGGGTGGAGAGGCCCATCTTCTTGTGTTCATTTTAGAGTTAAACAGAATGGATTTTTTA 157 6674669 0.988137635 25 145 1320 0.934065934 1.62838893 0.065934066 0.133757962 0.252747253 157 9 3 170 2L:6674496-6674706 8 CG34310 FBtr0333516|FBtr0346453 6674524|6674524 6674780|6674780 TGTGTTCA 8mer-A1 dme-miR-317-3p 2L + 6674644 6674696 3'utr CG34310 FlyBase G2004.2 ACTTTGGGTGGAGAGGCCCATCTTCTTGTGTTCATTTTAGAGTTAAACAGAAT 44 6674669 0.675670051 8 42 479 0.944444444 1.707570176 0.092592593 0.204545455 0.351851852 44 3 0 51 2L:6674644-6674696 8 46 881 FBgn0085339 513.3133333 76.24666667 117.4333333 0.089613881 0.603305063 0.391711609 1 1 1 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2L 6674759 6674764 + 2L_6674759_6674764_+ 1 1 1 0 CG34310 FBtr0346453|FBtr0333516 6674524|6674524 6674780|6674780 2L + 6674744 6674770 3'utr CG34310 FlyBase G2536.1 AAATGGTTTGAATAAAAGACTAGAAAC 8 6674751 0.59418431 5 8 36 1 1.079181246 0.166666667 0.375 0.583333333 8 0 0 12 2L:6674744-6674770 6 CG34310 FBtr0333516|FBtr0346453 6674524|6674524 6674780|6674780 AAGACT 6mer3-8 dme-miR-14-3p 2L + 6674712 6674769 3'utr CG34310 FlyBase G2005.1 GTAATATGAATTGAATAAATAATGAAAAGCACAAATGGTTTGAATAAAAGACTAGAAA 7 6674752 0.964214738 6 7 35 1 1 0 0.428571429 0.6 7 0 0 10 2L:6674712-6674769 6 6.5 882 FBgn0085339 513.3133333 76.24666667 117.4333333 0.012662831 0.085249628 0.055350554 8 7 7.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 6677978 6677983 - 2L_6677978_6677983_- 1 1 1 0 Nhe3 FBtr0300327|FBtr0273247|FBtr0273248|FBtr0333348|FBtr0273250 6677833|6677833|6677833|6677833|6677833 6678146|6679193|6678723|6679064|6678723 2L - 6677862 6678007 3'utr Nhe3 FlyBase G8244.1 AAGTTTCAAAGCTGATTCACTTGCTGATCTATAACATTTTCCGATATTACCTAGGACCCTCCTATTTCTTACTATATATACGCTGTATTTAAAACAAAGCGAAGCTCTCTGAAAATATTAATTGTTGTGCTGTTAATTTTTAAGTC 63 6677986 0.987220525 14 62 544 0.987179487 1.886490725 0.051282051 0.206349206 0.358974359 63 1 0 77 2L:6677862-6678007 6 Nhe3 FBtr0273250|FBtr0300327|FBtr0273247|FBtr0273248|FBtr0333348 6677833|6677833|6677833|6677833|6677833 6678723|6678146|6679193|6678723|6679064 TGATCT 6mer3-8 dme-bantam-3p 2L - 6677964 6678039 3'utr Nhe3 FlyBase G6411.1 AAAACGGACTAATTGTATTCGGTTTAGTTTTTAAGTTTCAAAGCTGATTCACTTGCTGATCTATAACATTTTCCGA 56 6677986 0.789584705 6 56 469 1 1.908485019 0.061728395 0.392857143 0.580246914 56 0 0 81 2L:6677964-6678039 6 51.5 883 FBgn0028703 495.63 20.01 30.39666667 0.103908157 2.573713143 1.694264722 3 3 3 0.01 dme-miR-79-3p 7mer-m8 TAGCTTT 2L 6678077 6678083 - 2L_6678077_6678083_- 0.620204031 0.620204031 0.620204031 0 Nhe3 FBtr0300327|FBtr0273247|FBtr0273248|FBtr0333348|FBtr0273250 6677833|6677833|6677833|6677833|6677833 6678146|6679193|6678723|6679064|6678723 2L - 6678064 6678097 3'utr Nhe3 FlyBase G8245.1 ACAACATAAACTTATAGCTTTTTCGTTCTAAGCC 16 6678076 0.625529767 4 15 148 0.954545455 1.322219295 0 0.375 0.545454545 16 1 0 21 2L:6678064-6678097 7 Nhe3 FBtr0273250|FBtr0300327|FBtr0273247|FBtr0273248|FBtr0333348 6677833|6677833|6677833|6677833|6677833 6678723|6678146|6679193|6678723|6679064 TAGCTTT 7mer-m8 dme-miR-79-3p 2L - 6678049 6678095 3'utr Nhe3 FlyBase G6412.1 AACATAAACTTATAGCTTTTTCGTTCTAAGCCAGTTAGTGTAAATAT 12 6678076 0.963675839 3 11 113 0.842105263 1.204119983 0 0.416666667 0.631578947 12 3 0 16 2L:6678049-6678095 7 13 884 FBgn0028703 495.63 20.01 30.39666667 0.026229244 0.649675162 0.427678474 -7 -7 -7 0.01 dme-miR-932-5p 6mer2-7 GAATTG 2L 6678682 6678687 - 2L_6678682_6678687_- 1 1 1 0 Nhe3 FBtr0273247|FBtr0273248|FBtr0273250 6677833|6677833|6677833 6679193|6678723|6678723 2L - 6678624 6678702 3'utr Nhe3 FlyBase G8247.2 CTTTTGTTATTTATTGAATTGGTCTCAACTGAAATCGAAAATGTGAAAACTGTACAAATTAGAATATTACTTTTCAGTT 259 6678684 0.724330692 19 240 2028 0.93015873 1.68871637 0.174603175 0.181467181 0.326984127 259 17 5 293 2L:6678624-6678702 6 Nhe3 FBtr0273250|FBtr0273247|FBtr0273248 6677833|6677833|6677833 6678723|6679193|6678723 GAATTG 6mer2-7 dme-miR-932-5p 2L - 6678630 6678709 3'utr Nhe3 FlyBase G6416.1 TAGTTTTCTTTTGTTATTTATTGAATTGGTCTCAACTGAAATCGAAAATGTGAAAACTGTACAAATTAGAATATTACTTT 182 6678684 0.722392589 16 177 1385 0.97080292 2.123851641 0.142335766 0.357142857 0.572992701 182 7 1 266 2L:6678630-6678709 6 159 885 FBgn0028703 495.63 20.01 30.39666667 0.320803825 7.946026987 5.230836715 -3 -3 -3 0.01 dme-miR-8-3p 6mer3-8 CAGTAT 2L 6679652 6679657 - 2L_6679652_6679657_- 1 1 1 0 Nhe3 FBtr0333347 6679319 6679922 2L - 6679631 6679707 3'utr Nhe3 FlyBase G8249.1 AATGTTAAATTTTGTGGTATAAGCGGAAGTGATGGATAAGTTACACCCTTCAGTATGGTTGACTAATTGTTTAAGTT 21 6679658 0.793852309 9 18 171 0.869565217 1.301029996 0.173913043 0.095238095 0.173913043 21 3 0 20 2L:6679631-6679707 6 Nhe3 FBtr0333347 6679319 6679922 CAGTAT 6mer3-8 dme-miR-8-3p 2L - 6679637 6679671 3'utr Nhe3 FlyBase G6418.1 TAAGTTACACCCTTCAGTATGGTTGACTAATTGTT 22 6679659 0.795544405 5 21 166 0.967741935 1.477121255 0.258064516 0.318181818 0.516129032 22 1 0 30 2L:6679637-6679671 6 17.5 886 FBgn0028703 495.63 20.01 30.39666667 0.035308597 0.874562719 0.575721022 1 2 1.5 0.01 dme-miR-932-5p 6mer2-7 GAATTG 2L 6679758 6679763 - 2L_6679758_6679763_- 0.538465508 1 0.769232754 0.326354175 Nhe3 FBtr0333347 6679319 6679922 2L - 6679745 6679810 3'utr Nhe3 FlyBase G8250.1 TGAATCTACACCACAGAGACTTTGGCAAAGTAGACGTATTATTGTATGAATTGGCCGTGAAAATGT 59 6679759 0.790946292 8 59 311 1 1.875061263 0.08 0.237288136 0.4 59 0 0 75 2L:6679745-6679810 6 Nhe3 FBtr0333347 6679319 6679922 GAATTG 6mer2-7 dme-miR-932-5p 2L - 6679745 6679807 3'utr Nhe3 FlyBase G6419.1 ATCTACACCACAGAGACTTTGGCAAAGTAGACGTATTATTGTATGAATTGGCCGTGAAAATGT 36 6679759 0.750003471 7 35 176 1 1.662757832 0.065217391 0.25 0.413043478 36 0 0 46 2L:6679745-6679807 6 31 887 FBgn0028703 495.63 20.01 30.39666667 0.062546658 1.549225387 1.019848668 -4 -4 -4 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2L 6679889 6679894 - 2L_6679889_6679894_- 1 1 1 0 Nhe3 FBtr0333347 6679319 6679922 2L - 6679854 6679929 stop_codon Nhe3 FlyBase G8251.1 TGAATAACCGAATGAGCGAAGCACCCCAGACACCAAAGACTAATCTAAGCGTAGCAAGCTGGCCACTAACAAAGAA 8 6679870 0.859293783 4 8 20 1 0.954242509 0.222222222 0.125 0.222222222 8 0 0 9 2L:6679854-6679929 6 Nhe3 FBtr0333347 6679319 6679922 AAGACT 6mer3-8 dme-miR-14-3p 2L - 6679859 6679915 3'utr Nhe3 FlyBase G6420.1 AGCGAAGCACCCCAGACACCAAAGACTAATCTAAGCGTAGCAAGCTGGCCACTAACA 7 6679886 0.770125506 4 6 12 1 1 0.2 0.428571429 0.6 7 0 0 10 2L:6679859-6679915 6 3.5 888 FBgn0028703 495.63 20.01 30.39666667 0.007061719 0.174912544 0.115144204 -24 -8 -16 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 2L 6720223 6720228 - 2L_6720223_6720228_- 1 0.9932834 0.9966417 0.004749353 homer FBtr0329892|FBtr0333346|FBtr0079307 6719392|6719894|6719894 6721023|6721023|6721023 2L - 6720194 6720301 3'utr homer FlyBase G8261.1 ATTGATTGATTCTCGTGCGCAGTAAAGTGCAATATACATTTATCTCTAGTATGTAAATGTAAACGATGATATTATGTGCTCTATACACTTTCAGCTGATTGTTAATTA 19 6720227 0.989885991 10 16 159 0.869565217 1.301029996 0.260869565 0.210526316 0.347826087 19 3 0 20 2L:6720194-6720301 6 homer FBtr0079307|FBtr0333346|FBtr0329892 6719894|6719894|6719392 6721023|6721023|6721023 ATGTGC 6mer3-8 dme-miR-305-3p 2L - 6720197 6720301 3'utr homer FlyBase G6428.1 ATTGATTGATTCTCGTGCGCAGTAAAGTGCAATATACATTTATCTCTAGTATGTAAATGTAAACGATGATATTATGTGCTCTATACACTTTCAGCTGATTGTTAA 19 6720228 0.989654244 9 16 157 0.896551724 0.812913357 0.137931034 0.473684211 0.655172414 19 0 3 26 2L:6720197-6720301 6 6.5 889 FBgn0025777 829.61 37.73333333 57.58 0.007835007 0.172261484 0.112886419 -1 0 -0.5 0.01 dme-miR-318-3p 6mer3-8 CCCAGT 2L 6720349 6720354 - 2L_6720349_6720354_- 0.999465332 1 0.999732666 0.00037809 homer FBtr0329892|FBtr0333346|FBtr0079307 6719392|6719894|6719894 6721023|6721023|6721023 2L - 6720304 6720370 3'utr homer FlyBase G8262.1 TGAATGTATACCTATGCCCAGTATTTCGTCAAAATTCTTCGAGTCCTTGTGACACTGATGTAGGTCC 15 6720356 0.984437746 7 15 121 1 1.278753601 0 0.2 0.368421053 15 0 0 19 2L:6720304-6720370 6 homer FBtr0079307|FBtr0333346|FBtr0329892 6719894|6719894|6719392 6721023|6721023|6721023 CCCAGT 6mer3-8 dme-miR-318-3p 2L - 6720306 6720372 3'utr homer FlyBase G6429.1 ATTGAATGTATACCTATGCCCAGTATTTCGTCAAAATTCTTCGAGTCCTTGTGACACTGATGTAGGT 11 6720357 0.985145773 7 11 95 1 1.322219295 0 0.545454545 0.761904762 11 0 0 21 2L:6720306-6720372 6 10 890 FBgn0025777 829.61 37.73333333 57.58 0.012053857 0.265017668 0.173671414 2 3 2.5 0.01 dme-miR-305-5p 6mer2-7 GTACAA 2L 6731084 6731089 + 2L_6731084_6731089_+ 1 1 1 0 Liprin-alpha FBtr0329942|FBtr0079301|FBtr0329943|FBtr0329941|FBtr0079300 6730687|6730687|6730726|6730687|6730687 6731600|6731600|6731345|6732766|6731345 2L + 6731062 6731112 3'utr Liprin-alpha FlyBase G2560.1 AGTCGCTGCCGCTGCCAGGCGTGTACAAGTTTTAGAAGCTAATCAGTTTTC 10 6731094 0.979136204 4 9 62 1 1.146128036 0.142857143 0.4 0.571428571 10 0 0 14 2L:6731062-6731112 6 Liprin-alpha FBtr0329942|FBtr0079300|FBtr0329941|FBtr0329943|FBtr0079301 6730687|6730687|6730687|6730726|6730687 6731600|6731345|6732766|6731345|6731600 GTACAA 6mer2-7 dme-miR-305-5p 2L + 6731042 6731113 3'utr Liprin-alpha FlyBase G2020.1 ACGTAGTTGCATTGGCGCCAAGTCGCTGCCGCTGCCAGGCGTGTACAAGTTTTAGAAGCTAATCAGTTTTCG 9 6731094 0.983026449 5 7 51 0.916666667 1.041392685 0.5 0.333333333 0.5 9 1 0 11 2L:6731042-6731113 6 6.5 891 FBgn0046704 1858.986667 39.04 59.95333333 0.003496529 0.166495902 0.108417658 -10 -10 -10 0.01 dme-miR-252-5p 7mer-m8 GTACTTA 2L 6731985 6731991 + 2L_6731985_6731991_+ 0.588299917 0.588299917 0.588299917 0 Liprin-alpha FBtr0329941 6730687 6732766 2L + 6731974 6732012 3'utr Liprin-alpha FlyBase G2564.1 AAGTTTTGCATGTACTTACTTTCCCTTTATACGTTAAAG 15 6731984 0.930055824 2 15 169 1 1.230448921 0.058823529 0.133333333 0.235294118 15 0 0 17 2L:6731974-6732012 7 Liprin-alpha FBtr0329941 6730687 6732766 GTACTTA 7mer-m8 dme-miR-252-5p 2L + 6731971 6732008 3'utr Liprin-alpha FlyBase G2023.1 TTTAAGTTTTGCATGTACTTACTTTCCCTTTATACGTT 15 6731984 0.811510161 3 14 165 0.9 1.255272505 0 0.266666667 0.45 15 2 0 18 2L:6731971-6732008 7 15 892 FBgn0046704 1858.986667 39.04 59.95333333 0.008068912 0.384221311 0.250194596 1 1 1 0.01 dme-miR-965-3p 6mer2-7 ACGCTT 2L 6732131 6732136 + 2L_6732131_6732136_+ 1 1 1 0 Liprin-alpha FBtr0329941 6730687 6732766 2L + 6732103 6732144 3'utr Liprin-alpha FlyBase G2565.1 TGTGTACAAAAAACCAAAATTGCAACTAACGCTTGTCCTTAA 6 6732128 0.984046085 4 5 41 0.857142857 0.77815125 0.285714286 0.166666667 0.285714286 6 1 0 6 2L:6732103-6732144 6 Liprin-alpha FBtr0329941 6730687 6732766 ACGCTT 6mer2-7 dme-miR-965-3p 2L + 6732117 6732148 3'utr Liprin-alpha FlyBase G2024.1 CAAAATTGCAACTAACGCTTGTCCTTAAGTTG 5 6732129 0.896368235 2 5 36 1 0.903089987 0.125 0.4 0.625 5 0 0 8 2L:6732117-6732148 6 5.5 893 FBgn0046704 1858.986667 39.04 59.95333333 0.002958601 0.140881148 0.091738018 3 2 2.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 6778791 6778796 - 2L_6778791_6778796_- 1 1 1 0 nrv1 FBtr0079384 6778553 6779372 2L - 6778772 6778815 3'utr nrv1 FlyBase G8266.1 CATGGAGAACGAAACATTTTGATCTAAGCTGAATGTCGATTATT 41 6778797 0.656066173 7 38 280 0.936170213 1.643452676 0.234042553 0.12195122 0.234042553 41 3 0 44 2L:6778772-6778815 6 nrv1 FBtr0079384 6778553 6779372 TGATCT 6mer3-8 dme-bantam-3p 2L - 6778772 6778814 3'utr nrv1 FlyBase G6432.1 ATGGAGAACGAAACATTTTGATCTAAGCTGAATGTCGATTATT 32 6778797 0.633711496 8 30 216 0.923076923 1.681241237 0.307692308 0.53125 0.711538462 32 4 0 48 2L:6778772-6778814 6 36 894 FBgn0015776 3384.113333 195.7933333 300.12 0.010637942 0.183867343 0.119952019 1 1 1 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 2L 6778857 6778863 - 2L_6778857_6778863_- 0.782911824 0.782911824 0.782911824 0 nrv1 FBtr0332370|FBtr0079384 6778822|6778553 6779372|6779372 2L - 6778837 6778966 3'utr nrv1 FlyBase G8267.1 GATCATTATTTTCTGTCAGTTGTATTTAGTTTTAATTTATAAATGTTGAAACATGCCCGAAAAATTCTTTGTTTCCCGCACATCGCCTAGGCTTGTTCAATTTGTACAAAGAAGCAACTAAATAAATTAT 76 6778865 0.994659181 15 75 482 0.989583333 1.977723605 0.354166667 0.210526316 0.375 76 1 0 95 2L:6778837-6778966 7 nrv1 FBtr0332370|FBtr0079384 6778822|6778553 6779372|6779372 GTACAAA 7mer-A1 dme-miR-305-5p 2L - 6778844 6778927 3'utr nrv1 FlyBase G6433.1 TAAATGTTGAAACATGCCCGAAAAATTCTTTGTTTCCCGCACATCGCCTAGGCTTGTTCAATTTGTACAAAGAAGCAACTAAAT 59 6778865 0.987244447 7 58 353 0.9875 1.897627091 0.1875 0.271186441 0.4625 59 1 0 79 2L:6778844-6778927 7 34.5 895 FBgn0015776 3384.113333 195.7933333 300.12 0.010194694 0.176206204 0.114954018 2 2 2 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 2L 6778903 6778908 - 2L_6778903_6778908_- 1 1 1 0 nrv1 FBtr0332370|FBtr0079384 6778822|6778553 6779372|6779372 2L - 6778837 6778966 3'utr nrv1 FlyBase G8267.1 GATCATTATTTTCTGTCAGTTGTATTTAGTTTTAATTTATAAATGTTGAAACATGCCCGAAAAATTCTTTGTTTCCCGCACATCGCCTAGGCTTGTTCAATTTGTACAAAGAAGCAACTAAATAAATTAT 76 6778913 0.994659181 15 75 482 0.989583333 1.977723605 0.354166667 0.210526316 0.375 76 1 0 95 2L:6778837-6778966 6 nrv1 FBtr0332370|FBtr0079384 6778822|6778553 6779372|6779372 GAAAAA 6mer3-8 dme-miR-980-5p 2L - 6778844 6778927 3'utr nrv1 FlyBase G6433.1 TAAATGTTGAAACATGCCCGAAAAATTCTTTGTTTCCCGCACATCGCCTAGGCTTGTTCAATTTGTACAAAGAAGCAACTAAAT 59 6778913 0.987244447 7 58 353 0.9875 1.897627091 0.1875 0.271186441 0.4625 59 1 0 79 2L:6778844-6778927 6 24.5 896 FBgn0015776 3384.113333 195.7933333 300.12 0.00723971 0.125131942 0.081634013 5 5 5 0.01 dme-miR-79-3p 7mer-m8 TAGCTTT 2L 6779040 6779046 - 2L_6779040_6779046_- 0.620204031 0.620204006 0.620204018 0 nrv1 FBtr0332370|FBtr0079384 6778822|6778553 6779372|6779372 2L - 6779030 6779141 3'utr nrv1 FlyBase G8268.1 CGTCAATTGAACTCTGAACATCTGGCCTAATAGAGAAATAGAAAGTCGAAAATCTTGAAATTAAAGTTCAAATCGTACACACGCAATTGTTGTTATAGCTTTTAGCTTGTCT 53 6779055 0.838812859 19 51 412 0.967213115 1.469822016 0.147540984 0.113207547 0.229508197 53 1 1 59 2L:6779030-6779141 7 nrv1 FBtr0332370|FBtr0079384 6778822|6778553 6779372|6779372 TAGCTTT 7mer-m8 dme-miR-79-3p 2L - 6778988 6779162 3'utr nrv1 FlyBase G6434.1 CGAAGGAATGATCCGACCGATCGTCAATTGAACTCTGAACATCTGGCCTAATAGAGAAATAGAAAGTCGAAAATCTTGAAATTAAAGTTCAAATCGTACACACGCAATTGTTGTTATAGCTTTTAGCTTGTCTATTGCTATCAGTTATTATTATTAATATTTATCATATTATTTC 36 6779055 0.983199472 18 35 305 1 1.707570176 0.196078431 0.361111111 0.549019608 36 0 0 51 2L:6778988-6779162 7 19.5 897 FBgn0015776 3384.113333 195.7933333 300.12 0.005762218 0.099594811 0.06497401 9 9 9 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2L 6779337 6779342 - 2L_6779337_6779342_- 1 1 1 0 nrv1 FBtr0332370|FBtr0332370|FBtr0332370|FBtr0079384|FBtr0079384|FBtr0079384 6778822|6778822|6778822|6778553|6778553|6778553 6779372|6779372|6779372|6779372|6779372|6779372 2L - 6779330 6779434 stop_codon nrv1 FlyBase G8269.3 AGTACAGTGGCAGTGTCCGCGATCGCAAGGGCTCCGTGACCTTCCAGATCCTCCTGGACTAAGTGCGGGGAATGGGAATCATGTCGCCAACTTGTGATCGCAGCA 451 6779343 0.948859175 12 397 2243 0.880067568 1.06362521 0.170608108 0.241685144 0.422297297 451 27 44 521 2L:6779330-6779434 6 nrv1 FBtr0332370|FBtr0332370|FBtr0332370|FBtr0079384|FBtr0079384|FBtr0079384 6778822|6778822|6778822|6778553|6778553|6778553 6779372|6779372|6779372|6779372|6779372|6779372 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 6779330 6779371 3'utr nrv1 FlyBase G6435.2 TGCGGGGAATGGGAATCATGTCGCCAACTTGTGATCGCAGCA 323 6779343 0.774536091 5 286 1619 0.87755102 1 0.16122449 0.359133127 0.57755102 323 18 42 430 2L:6779330-6779371 6 377.5 898 FBgn0015776 3384.113333 195.7933333 300.12 0.111550638 1.92805339 1.257830201 1 1 1 0.01 dme-miR-305-5p 8mer-A1 AGTACAAA 2L 6906875 6906882 - 2L_6906875_6906882_- 0.605654138 0.605654138 0.605654138 0 CG13773 FBtr0079372 6906664 6906917 2L - 6906862 6906910 3'utr CG13773 FlyBase G8287.1 ACCTTTCGTTTTTAACATCTCTGTATATAGTACAAATTAACAATTACAT 46 6906885 0.781638653 6 45 438 0.980392157 1.397940009 0.098039216 0.086956522 0.176470588 46 0 1 50 2L:6906862-6906910 8 CG13773 FBtr0079372 6906664 6906917 AGTACAAA 8mer-A1 dme-miR-305-5p 2L - 6906870 6906908 3'utr CG13773 FlyBase G6451.1 CTTTCGTTTTTAACATCTCTGTATATAGTACAAATTAAC 14 6906885 0.726582326 5 12 129 0.909090909 1 0 0.428571429 0.636363636 14 1 1 20 2L:6906870-6906908 8 30 899 FBgn0042092 166.9866667 19.41666667 29.97666667 0.179655062 1.545064378 1.000778383 3 3 3 0.01 dme-miR-8-3p 6mer2-7 AGTATT 2L 6911429 6911434 - 2L_6911429_6911434_- 1 1 1 0 Wee1 FBtr0332329|FBtr0079371 6911088|6911341 6911700|6911700 2L - 6911390 6911465 3'utr Wee1 FlyBase G8291.1 TAAACTTTAAGATTCTCGCATAGTTGTAATGAGTATTGTTTTCGAAATTAAAATATTTATTATGTTACATGGAAAT 11 6911432 0.986513279 8 11 96 1 1.176091259 0.133333333 0.272727273 0.466666667 11 0 0 15 2L:6911390-6911465 6 Wee1 FBtr0332329|FBtr0079371 6911088|6911341 6911700|6911700 AGTATT 6mer2-7 dme-miR-8-3p 2L - 6911413 6911448 3'utr Wee1 FlyBase G6455.1 GCATAGTTGTAATGAGTATTGTTTTCGAAATTAAAA 7 6911429 0.951315344 4 6 62 1 1 0.2 0.428571429 0.6 7 0 0 10 2L:6911413-6911448 6 6 900 FBgn0011737 492.04 24.44666667 37.58666667 0.012194131 0.245432233 0.159631075 -2 -5 -3.5 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 2L 6911628 6911633 - 2L_6911628_6911633_- 1 1 1 0 Wee1 FBtr0332329|FBtr0079371 6911088|6911341 6911700|6911700 2L - 6911609 6911700 3'utr Wee1 FlyBase G8293.1 TAAGCTCGCAACAGATGCCGAACCGATAGCTAAACTCTTCCGAATCGAACGTGAACTAAGCTCACATTGTGTTACCTTTTAAGCGTATTCAT 95 6911633 0.98104352 11 93 633 0.98245614 2.049218023 0.140350877 0.178947368 0.315789474 95 2 0 112 2L:6911609-6911700 6 Wee1 FBtr0332329|FBtr0079371 6911088|6911341 6911700|6911700 TGTGTT 6mer3-8 dme-miR-317-3p 2L - 6911608 6911708 stop_codon Wee1 FlyBase G6456.1 ATATCTGATAAGCTCGCAACAGATGCCGAACCGATAGCTAAACTCTTCCGAATCGAACGTGAACTAAGCTCACATTGTGTTACCTTTTAAGCGTATTCATA 53 6911634 0.962293907 9 52 361 0.977272727 1.934498451 0.284090909 0.433962264 0.659090909 53 2 0 86 2L:6911608-6911708 6 43.5 901 FBgn0011737 492.04 24.44666667 37.58666667 0.088407447 1.779383692 1.157325293 0 1 0.5 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 2L 6914413 6914418 - 2L_6914413_6914418_- 1 1 1 0 x16 FBtr0079368|FBtr0332328 6914379|6914299 6915042|6915042 2L - 6914381 6914449 3'utr x16 FlyBase G8310.1 TGCATAATAATTATTCATACATTGATGTCATAGTTAAGTATTAAAAAAATACATATGTATGGATTCTTG 44 6914428 0.990719572 4 43 451 0.981132075 1.716003344 0 0.204545455 0.339622642 44 1 0 52 2L:6914381-6914449 6 x16 FBtr0079368|FBtr0332328 6914379|6914299 6915042|6915042 AGTTAA 6mer3-8 dme-miR-999-3p 2L - 6914407 6914450 3'utr x16 FlyBase G6466.1 GTGCATAATAATTATTCATACATTGATGTCATAGTTAAGTATTA 33 6914428 0.830989791 2 33 347 1 1.716003344 0.019230769 0.333333333 0.576923077 33 0 0 52 2L:6914407-6914450 6 38 902 FBgn0028554 1073.163333 75.76666667 116.1166667 0.035409335 0.501539815 0.327257069 10 10 10 0.01 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 6914654 6914661 - 2L_6914654_6914661_- 0.63113665 0.63113665 0.63113665 0 x16 FBtr0079368|FBtr0332328 6914379|6914299 6915042|6915042 2L - 6914548 6914677 3'utr x16 FlyBase G8311.1 AGCCGCAGATTAACGATCTAGTCAGGATTGCTATGTAAATTGATTTGCCTTGGATTTTATTTTGCTTACCCTGGAATTATACTCGAATGTGCAGAGGACGAAGCATCGCCACCATTTTCATGTCAATTTT 31 6914661 0.934813068 10 29 222 0.941176471 1.204119983 0.205882353 0.096774194 0.176470588 31 1 1 32 2L:6914548-6914677 8 x16 FBtr0079368|FBtr0332328 6914379|6914299 6915042|6915042 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 6914622 6914703 3'utr x16 FlyBase G6467.1 AATTTAAGATATAGAAATGTATCGGCAGCCGCAGATTAACGATCTAGTCAGGATTGCTATGTAAATTGATTTGCCTTGGATT 28 6914667 0.972373818 9 27 162 0.977272727 1.633468456 0.318181818 0.464285714 0.659090909 28 1 0 43 2L:6914622-6914703 8 21 903 FBgn0028554 1073.163333 75.76666667 116.1166667 0.019568317 0.27716674 0.180852591 0 6 3 0.01 dme-miR-305-5p 6mer2-7 GTACAA 2L 6925638 6925643 + 2L_6925638_6925643_+ 1 0.963619977 0.981809989 0.025724545 Hrb27C FBtr0079347|FBtr0307032|FBtr0301404|FBtr0301403|FBtr0079346|FBtr0307031|FBtr0307030 6925454|6925454|6925454|6925454|6925454|6925454|6925454 6926046|6932057|6926046|6926046|6926806|6926806|6928675 2L + 6925481 6925659 3'utr Hrb27C FlyBase G2631.1 AGTAGGAGTAGCGGAGCAGAGAGGAGCGGAGTAGCATGTCGTCCTCGGCGAATGATGAAGAAGACAGAAAAGATGGTGGTAATTGTAAGCTAAAGCGTCGTCTGTTCGTTTTTATTTCAGATCAGATCAGTTGTTGAAATTAATATTTAAAACTCTTGTACAACTATTATTTAAAGCGA 312 6925636 0.976993289 30 305 2031 0.975609756 1.954242509 0.27100271 0.147435897 0.279132791 312 6 3 360 2L:6925481-6925659 6 Hrb27C FBtr0307030|FBtr0079346|FBtr0307031|FBtr0307032 6925454|6925454|6925454|6925454 6928675|6926806|6926806|6932057 GTACAA 6mer2-7 dme-miR-305-5p 2L + 6925617 6925795 3'utr Hrb27C FlyBase G2073.2 AAATTAATATTTAAAACTCTTGTACAACTATTATTTAAAGCGAAAAAAAATTTAACATGAGAATAACTAGCGACAAGTCAGATTCATAGATATACATGTATGTTCTATAGCAGCGAGTATGTAATTCATAGGCGAAACATCAGCACTCTCACCCATTTAGACAAGAGAACATTATTTCT 127 6925636 0.930057685 23 112 905 0.910526316 1.760924848 0.210526316 0.377952756 0.584210526 127 15 2 173 2L:6925617-6925795 6 103 904 FBgn0004838 17779.86667 540.8 834.9466667 0.005793069 0.19045858 0.123361173 2 2 2 0.01 dme-miR-980-5p 7mer-m1 AAAAACT 2L 6926732 6926738 + 2L_6926732_6926738_+ 0.765586663 0.765586663 0.765586663 0 Hrb27C FBtr0307032|FBtr0079346|FBtr0307031|FBtr0307030 6925454|6925454|6925454|6925454 6932057|6926806|6926806|6928675 2L + 6926693 6926802 3'utr Hrb27C FlyBase G2636.2 TATGGAAACCAACAAAACACACTCTTAACCAATATACATAAAAACTATAAACATACTTATAAACAATATATATATATATATATTTAAAGCGAGTATATATATATAAAAGG 57 6926725 0.812491577 12 49 292 0.928571429 1.511883361 0.042857143 0.140350877 0.3 57 4 1 65 2L:6926693-6926802 7 Hrb27C FBtr0307030|FBtr0079346|FBtr0307031|FBtr0307032 6925454|6925454|6925454|6925454 6928675|6926806|6926806|6932057 AAAAACT 7mer-m1 dme-miR-980-5p 2L + 6926628 6926744 3'utr Hrb27C FlyBase G2077.1 TATTTAGTTAAAGCGAAATGAAAGAGCCAAGCAGCAGCAGCATGATAATGATTGATTATAATGGATATGGAAACCAACAAAACACACTCTTAACCAATATACATAAAAACTATAAAC 63 6926725 0.988588256 13 59 271 0.964705882 1.913813852 0.211764706 0.317460317 0.494117647 63 3 0 82 2L:6926628-6926744 7 29.5 905 FBgn0004838 17779.86667 540.8 834.9466667 0.00165918 0.054548817 0.035331598 7 7 7 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 2L 6926924 6926929 + 2L_6926924_6926929_+ 1 1 1 0 Hrb27C FBtr0307032|FBtr0307030 6925454|6925454 6932057|6928675 2L + 6926820 6926952 3'utr Hrb27C FlyBase G2637.1 AGAGTAAAAAAAAGAGCAAAAGGAAACGTAAATTTAAAGCTACAGTTAATGAAAATAATGAGTACAGAGTTAAAAAAGGGGAGGCAGGAAGAGAGAATAGGACAAGTTAAACAAGTTACAAAATACGATGCTT 422 6926917 0.944540358 10 409 729 0.976890756 2.190331698 0.12394958 0.111374408 0.212184874 422 9 2 465 2L:6926820-6926952 6 Hrb27C FBtr0307030|FBtr0307032 6925454|6925454 6928675|6932057 AGTTAA 6mer3-8 dme-miR-999-3p 2L + 6926891 6926956 3'utr Hrb27C FlyBase G2078.1 AAAAAAGGGGAGGCAGGAAGAGAGAATAGGACAAGTTAAACAAGTTACAAAATACGATGCTTAGAG 237 6926917 0.895000813 6 231 414 0.985507246 2.531478917 0.069565217 0.341772152 0.547826087 237 5 0 340 2L:6926891-6926956 6 320 906 FBgn0004838 17779.86667 540.8 834.9466667 0.017997885 0.591715976 0.383258012 7 7 7 0.01 dme-miR-317-3p 6mer2-7 GTGTTC 2L 6927649 6927654 + 2L_6927649_6927654_+ 1 1 1 0 Hrb27C FBtr0307032|FBtr0307030 6925454|6925454 6932057|6928675 2L + 6927607 6927840 3'utr Hrb27C FlyBase G2640.2 AATACAAATACTTTACTTTATTTTTCGGTGATTTATTGCTTAGTGTTCTTCGTATAATTTGTACTCTACTACAACAAAACAAATCCTACAGTTATAAATTCCTAATTTAATTTTGTTTAAATTACAAATACATATGCTTACATTTTATAACTAATTATACAATTTTTAAAAAATACCAACACAAAACAAAAGCAAAAGCGCTAAAACAATGAGTAAACAAGTAAAGTAAACGTG 451 6927639 0.987752877 40 428 5423 0.952117864 1.759248034 0.303867403 0.179600887 0.318600368 451 18 8 517 2L:6927607-6927840 6 Hrb27C FBtr0307030|FBtr0307032 6925454|6925454 6928675|6932057 GTGTTC 6mer2-7 dme-miR-317-3p 2L + 6927516 6927700 3'utr Hrb27C FlyBase G2081.1 AATTTTTTCTATTAAAGTACCATACACTAATTTTTAATTTGTTTATTTACAACAAATCAACTTACAATACATACATTTAATTACAATATACAATACAAATACTTTACTTTATTTTTCGGTGATTTATTGCTTAGTGTTCTTCGTATAATTTGTACTCTACTACAACAAAACAAATCCTACAGTTA 291 6927639 0.993927397 36 278 3552 0.960556845 2.315970345 0.236658933 0.343642612 0.556844548 291 16 1 414 2L:6927516-6927700 6 180.5 907 FBgn0004838 17779.86667 540.8 834.9466667 0.010151932 0.333764793 0.216181473 10 10 10 0.01 dme-miR-305-5p 7mer-m1 GTACAAT 2L 6943798 6943804 - 2L_6943798_6943804_- 0.765586663 0.765586663 0.765586663 0 Fgop2 FBtr0079366|FBtr0332325 6943738|6943176 6944048|6944048 2L - 6943777 6943815 3'utr Fgop2 FlyBase G8331.1 ACAAATGTAATGTACAATGTACCCTGTCGATTTTATGGT 7 6943798 0.763987188 3 7 50 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 2L:6943777-6943815 7 Fgop2 FBtr0332325|FBtr0079366 6943176|6943738 6944048|6944048 GTACAAT 7mer-m1 dme-miR-305-5p 2L - 6943774 6943813 3'utr Fgop2 FlyBase G6484.1 AAATGTAATGTACAATGTACCCTGTCGATTTTATGGTTTG 6 6943798 0.970309138 4 6 40 1 0.903089987 0 0.166666667 0.375 6 0 0 8 2L:6943774-6943813 7 6.5 908 FBgn0031871 525 42.17 64.62333333 0.012380952 0.154138013 0.100582865 -6 -6 -6 0.01 dme-miR-277-3p 6mer3-8 TGCATT 2L 6943939 6943944 - 2L_6943939_6943944_- 1 1 1 0 Fgop2 FBtr0079366|FBtr0332325 6943738|6943176 6944048|6944048 2L - 6943899 6943968 3'utr Fgop2 FlyBase G8332.1 CGCACGAAGAGGGCCCACATAACCTGCATTAGCTCTTAGCGATTGATAATCTCTAAGTAATTTATACATA 19 6943949 0.961067937 6 18 96 0.92 1.361727836 0.28 0.263157895 0.44 19 2 0 23 2L:6943899-6943968 6 Fgop2 FBtr0332325|FBtr0079366 6943176|6943738 6944048|6944048 TGCATT 6mer3-8 dme-miR-277-3p 2L - 6943911 6943963 3'utr Fgop2 FlyBase G6485.1 GAAGAGGGCCCACATAACCTGCATTAGCTCTTAGCGATTGATAATCTCTAAGT 13 6943940 0.974597509 3 12 79 0.882352941 1.176091259 0.176470588 0.230769231 0.411764706 13 2 0 15 2L:6943911-6943963 6 14.5 909 FBgn0031871 525 42.17 64.62333333 0.027619048 0.343846336 0.22437716 5 -4 0.5 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC 2L 6954425 6954431 - 2L_6954425_6954431_- 0.661615645 0.661615642 0.661615643 0 CG13775 FBtr0343775 6954355 6954584 2L - 6954402 6954442 3'utr CG13775 FlyBase G8347.1 ATCAGGATCATTGTGTTCCTCTTCGTCTTCCTCCTCCTCCT 10 6954432 0.79288534 2 10 100 1 1.113943352 0 0.2 0.384615385 10 0 0 13 2L:6954402-6954442 7 CG13775 FBtr0343775 6954355 6954584 TGTGTTC 7mer-m8 dme-miR-317-3p 2L - 6954402 6954442 3'utr CG13775 FlyBase G6497.1 ATCAGGATCATTGTGTTCCTCTTCGTCTTCCTCCTCCTCCT 9 6954432 0.799558189 3 9 101 1 1.079181246 0 0.333333333 0.5 9 0 0 12 2L:6954402-6954442 7 9.5 910 FBgn0031874 57.8 3.896666667 5.98 0.164359862 2.43798118 1.588628763 1 1 1 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA 2L 6954490 6954495 + 2L_6954490_6954495_+ 1 1 1 0 SA FBtr0079349 6954453 6954586 2L + 6954468 6954501 3'utr SA FlyBase G2658.1 ATCAGCCATACACGCGGCTTAAGTGCAAAATCTA 10 6954486 0.785031519 2 10 43 1 1.079181246 0 0.2 0.333333333 10 0 0 12 2L:6954468-6954501 6 SA FBtr0079349 6954453 6954586 GTGCAA 6mer3-8 dme-miR-92b-3p 2L + 6954463 6954500 3'utr SA FlyBase G2093.1 AGGCAATCAGCCATACACGCGGCTTAAGTGCAAAATCT 9 6954486 0.826077279 3 7 36 0.833333333 1 0 0.333333333 0.5 9 2 0 10 2L:6954463-6954500 6 8.5 911 FBgn0020616 1164.703333 38.63666667 59.09 0.007297996 0.219998275 0.143848367 4 4 4 0.01 dme-miR-31a-5p 6mer2-7 CTTGCC 2L 6959136 6959141 - 2L_6959136_6959141_- 1 1 1 0 Atac1 FBtr0079362 6959097 6959182 2L - 6959117 6959164 3'utr Atac1 FlyBase G8351.1 TACTTGAGTACTAAATTACTAGACTTGCCTGTAAAGCTACAAATTAAA 30 6959145 0.761542278 10 27 207 0.916666667 1.217483944 0.166666667 0.2 0.333333333 30 2 1 33 2L:6959117-6959164 6 Atac1 FBtr0079362 6959097 6959182 CTTGCC 6mer2-7 dme-miR-31a-5p 2L - 6959107 6959159 3'utr Atac1 FlyBase G6500.1 GAGTACTAAATTACTAGACTTGCCTGTAAAGCTACAAATTAAATATAAAGAGA 15 6959146 0.824867079 4 12 99 0.842105263 0.903089987 0.263157895 0.2 0.368421053 15 2 1 16 2L:6959107-6959159 6 21 912 FBgn0031876 128 12.98 19.96333333 0.1640625 1.617873652 1.051928536 4 5 4.5 0.01 dme-miR-305-5p 7mer-m8 AGTACAA 2L 6966868 6966874 - 2L_6966868_6966874_- 0.643267584 0.643267584 0.643267584 0 smt3 FBtr0079356|FBtr0346716 6966778|6966778 6967027|6967027 2L - 6966844 6966944 3'utr smt3 FlyBase G8372.2 CAAAAACACAACAACAACAACATGAAGAATCCAACAAACCAGGCCCTAAGAATCGATTGAATATGCTTTTAGTACAACTGTAGATTCTAAATGCGTCTGTG 79 6966876 0.987768481 17 75 701 0.955555556 1.633468456 0.177777778 0.139240506 0.244444444 79 3 1 86 2L:6966844-6966944 7 smt3 FBtr0079356|FBtr0346716 6966778|6966778 6967027|6967027 AGTACAA 7mer-m8 dme-miR-305-5p 2L - 6966850 6966944 3'utr smt3 FlyBase G6514.2 CAAAAACACAACAACAACAACATGAAGAATCCAACAAACCAGGCCCTAAGAATCGATTGAATATGCTTTTAGTACAACTGTAGATTCTAAATGCG 50 6966876 0.984249376 13 47 386 0.948051948 1.86332286 0.337662338 0.34 0.571428571 50 4 0 73 2L:6966850-6966944 7 55 913 FBgn0264922 12150.86667 2306.473333 3557.52 0.004526426 0.023845929 0.015460208 2 2 2 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2L 7015018 7015023 - 2L_7015018_7015023_- 1 1 1 0 ade3 FBtr0339663|FBtr0079431 7014621|7014859 7015085|7015085 2L - 7014997 7015045 3'utr ade3 FlyBase G8383.1 AGGGATGAGTTTATCTTACTCGAAGACTTTTTGTCAAATTAGTTATAAT 30 7015016 0.986413618 5 29 266 0.975 1.290034611 0.025 0.2 0.4 30 0 1 39 2L:7014997-7015045 6 ade3 FBtr0339663|FBtr0079431 7014621|7014859 7015085|7015085 AAGACT 6mer3-8 dme-miR-14-3p 2L - 7015008 7015034 3'utr ade3 FlyBase G6521.1 TATCTTACTCGAAGACTTTTTGTCAAA 23 7015016 0.682794551 3 23 187 1 1.462397998 0.034482759 0.217391304 0.379310345 23 0 0 29 2L:7015008-7015034 6 26.5 914 FBgn0000053 589.7966667 27.05333333 41.45 0.044930739 0.979546575 0.639324487 -7 -7 -7 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 2L 7030904 7030909 - 2L_7030904_7030909_- 1 1 1 0 Rab30 FBtr0079428|FBtr0079426|FBtr0079427 7030491|7030491|7030491 7031433|7031433|7031433 2L - 7030883 7030956 3'utr Rab30 FlyBase G8407.1 AGATCCTATGGGAAACTAGCTGTCAATGACTAAGGATGCTAAATATTTGTGTTACAAGAACTCCATTGGAGGTG 90 7030911 0.821874347 9 83 693 0.935185185 1.703291378 0.333333333 0.177777778 0.314814815 90 6 1 101 2L:7030883-7030956 6 Rab30 FBtr0079427|FBtr0079426|FBtr0079428 7030491|7030491|7030491 7031433|7031433|7031433 TGTGTT 6mer3-8 dme-miR-317-3p 2L - 7030823 7030956 3'utr Rab30 FlyBase G6535.2 AGATCCTATGGGAAACTAGCTGTCAATGACTAAGGATGCTAAATATTTGTGTTACAAGAACTCCATTGGAGGTGTTTAAGACCGCCTGATTTTCTTGATTTGTATTATATAGACGTATGTATTGATCTGATTAT 83 7030911 0.946101567 15 79 662 0.959677419 2.075546961 0.403225806 0.313253012 0.540322581 83 5 0 119 2L:7030823-7030956 6 67 915 FBgn0031882 194.3333333 12.53666667 18.90666667 0.344768439 5.344323318 3.543723554 2 2 2 0.01 dme-miR-980-3p 7mer-A1 GCAGCTA 2L 7031105 7031111 - 2L_7031105_7031111_- 0.823349562 0.823349562 0.823349562 0 Rab30 FBtr0079428|FBtr0079426|FBtr0079427 7030491|7030491|7030491 7031433|7031433|7031433 2L - 7031079 7031152 3'utr Rab30 FlyBase G8408.2 AAACATTTAAAGTACAATGTGCAAACGGATCTGGAAACTGTGCAGCTAATCTGTTATCTGTTATCGTGATATTC 73 7031114 0.86851819 15 57 442 0.846153846 1.40936947 0.230769231 0.164383562 0.32967033 73 12 2 77 2L:7031079-7031152 7 Rab30 FBtr0079427|FBtr0079426|FBtr0079428 7030491|7030491|7030491 7031433|7031433|7031433 GCAGCTA 7mer-A1 dme-miR-980-3p 2L - 7031083 7031201 3'utr Rab30 FlyBase G6536.2 AAGGTATTTAGAGCAATTCTCTTCGCTTTCACTAAACTACGATAACAACAAACATTTAAAGTACAATGTGCAAACGGATCTGGAAACTGTGCAGCTAATCTGTTATCTGTTATCGTGAT 68 7031114 0.85457327 18 59 422 0.909090909 1.653212514 0.151515152 0.323529412 0.535353535 68 8 1 90 2L:7031083-7031201 7 40.5 916 FBgn0031882 194.3333333 12.53666667 18.90666667 0.208404803 3.230523797 2.142101551 3 3 3 0.01 dme-miR-283-5p 7mer-m8 TGATATT 2L 7031367 7031373 - 2L_7031367_7031373_- 0.620203677 0.620203677 0.620203677 0 Rab30 FBtr0079428|FBtr0079426|FBtr0079427 7030491|7030491|7030491 7031433|7031433|7031433 2L - 7031326 7031486 stop_codon Rab30 FlyBase G8410.1 ATTGCTGTGGCGGACTCGCCAGCGGCGGCTCCAACTCTAGTCAAGGCGGCTGAGCAGCTGCAAACTGAACTGGAAGCTGAGCAGCTAATCTGTAACTTGTTAAGGACTAATCGTGATATTCCATTTATCTTTTATTACCACAATGCTCCCACATTCTAACA 131 7031377 0.96686346 20 125 697 0.951219512 1.716003344 0.158536585 0.183206107 0.347560976 131 6 2 156 2L:7031326-7031486 7 Rab30 FBtr0079427|FBtr0079426|FBtr0079428 7030491|7030491|7030491 7031433|7031433|7031433 TGATATT 7mer-m8 dme-miR-283-5p 2L - 7031349 7031507 stop_codon Rab30 FlyBase G6538.1 GTGCCAAGGCAGCGCAGAGCAATTGCTGTGGCGGACTCGCCAGCGGCGGCTCCAACTCTAGTCAAGGCGGCTGAGCAGCTGCAAACTGAACTGGAAGCTGAGCAGCTAATCTGTAACTTGTTAAGGACTAATCGTGATATTCCATTTATCTTTTATTAC 119 7031377 0.971845675 18 109 631 0.891752577 1.459894853 0.12371134 0.428571429 0.649484536 119 16 5 173 2L:7031349-7031507 7 58.5 917 FBgn0031882 194.3333333 12.53666667 18.90666667 0.30102916 4.666312151 3.094146685 4 4 4 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 7034833 7034838 + 2L_7034833_7034838_+ 1 1 1 0 Caper FBtr0344708|FBtr0344712|FBtr0344709|FBtr0344711 7034209|7034497|7034209|7034497 7037613|7037613|7037613|7037878 2L + 7034813 7034842 5'utr Caper FlyBase G2689.1 GCTAAACATTCCCCCAAAACTGATCTGATT 6 7034833 0.755958728 3 6 27 1 0.903089987 0.25 0.333333333 0.5 6 0 0 8 2L:7034813-7034842 6 Caper FBtr0344711|FBtr0344709|FBtr0344712|FBtr0344708 7034497|7034209|7034497|7034209 7037878|7037613|7037613|7037613 TGATCT 6mer3-8 dme-bantam-3p 2L + 7034810 7034849 5'utr Caper FlyBase G2118.1 AGCGCTAAACATTCCCCCAAAACTGATCTGATTGAGAATG 8 7034841 0.889066532 3 8 39 1 1.041392685 0.727272727 0.375 0.545454545 8 0 0 11 2L:7034810-7034849 6 6.5 918 FBgn0031883 799.28 33.26666667 50.99666667 0.008132319 0.195390782 0.127459311 0 -8 -4 0.01 dme-miR-11-3p 7mer-m1 TGTGATG 2L 7054713 7054719 + 2L_7054713_7054719_+ 0.612071121 0.612071121 0.612071121 0 milt FBtr0306230|FBtr0306228|FBtr0306231|FBtr0306232|FBtr0306233|FBtr0306229 7054555|7054555|7054555|7054555|7054555|7054555 7054847|7054847|7056010|7054847|7056010|7056010 2L + 7054673 7054729 5'utr milt FlyBase G2717.1 TACGCGAGAACAAGTTGAATAACGAAACGTAATGTAATCGTGTGATGAACGTTTAGT 14 7054688 0.968250832 9 13 69 0.933333333 1.146128036 0.2 0.071428571 0.133333333 14 1 0 14 2L:7054673-7054729 7 milt FBtr0306233|FBtr0306229|FBtr0306230|FBtr0306228|FBtr0306231|FBtr0306232 7054555|7054555|7054555|7054555|7054555|7054555 7056010|7056010|7054847|7054847|7056010|7054847 TGTGATG 7mer-m1 dme-miR-11-3p 2L + 7054668 7054738 5'utr milt FlyBase G2144.1 AGCACTACGCGAGAACAAGTTGAATAACGAAACGTAATGTAATCGTGTGATGAACGTTTAGTTTAATTTTT 14 7054688 0.967299234 9 14 77 1 1.431363764 0.333333333 0.5 0.740740741 14 0 0 27 2L:7054668-7054738 7 8.5 919 FBgn0262872 1801.88 44.2 67.81666667 0.004717295 0.192307692 0.125337921 25 25 25 0.01 dme-miR-1008-3p 8mer-A1 AGCTGTGA 2L 7054811 7054818 + 2L_7054811_7054818_+ 0.551390948 0.607068641 0.579229794 0.039370079 milt FBtr0306230|FBtr0306228|FBtr0306231|FBtr0306232|FBtr0306233|FBtr0306229 7054555|7054555|7054555|7054555|7054555|7054555 7054847|7054847|7056010|7054847|7056010|7056010 2L + 7054738 7054884 5'utr-coding milt FlyBase G2718.1 TCTGTTTAATACCCCGCATAATGCCTGTCATCGCCACCTTAAGCAACACTGGAAAGAAGGTTTTAGTGTTTGTAGCTGTGATTTGTAAATACATATATAGAGAAATGTTTAAATTTAGTAGTTATTAATCGAGTACTTCGCATATTA 603 7054820 0.84434385 30 565 5992 0.936528497 1.95604831 0.325129534 0.225538972 0.39507772 603 42 7 723 2L:7054738-7054884 8 milt FBtr0306233|FBtr0306229|FBtr0306230|FBtr0306228|FBtr0306231|FBtr0306232 7054555|7054555|7054555|7054555|7054555|7054555 7056010|7056010|7054847|7054847|7056010|7054847 AGCTGTGA 8mer-A1 dme-miR-1008-3p 2L + 7054741 7054867 5'utr-coding milt FlyBase G2145.1 GTTTAATACCCCGCATAATGCCTGTCATCGCCACCTTAAGCAACACTGGAAAGAAGGTTTTAGTGTTTGTAGCTGTGATTTGTAAATACATATATAGAGAAATGTTTAAATTTAGTAGTTATTAATC 451 7054820 0.872320436 28 417 4539 0.935714286 1.774848615 0.312857143 0.399113082 0.612857143 451 35 10 655 2L:7054741-7054867 8 456 920 FBgn0262872 1801.88 44.2 67.81666667 0.253069017 10.31674208 6.724010813 -9 -9 -9 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2L 7055393 7055399 + 2L_7055393_7055399_+ 0.661615511 0.661615511 0.661615511 0 milt FBtr0306231|FBtr0306233|FBtr0306229 7054555|7054555|7054555 7056010|7056010|7056010 2L + 7055363 7055433 3'utr milt FlyBase G2724.1 ACATAAATTATAGCGAAAAACGATTATTTTTCTAGTCCTACACTGGGTGGGTGCTCGTTTGGCTATGCAGA 73 7055392 0.848475309 11 70 658 0.964285714 1.908485019 0.095238095 0.095890411 0.214285714 73 3 0 81 2L:7055363-7055433 7 milt FBtr0306233|FBtr0306229|FBtr0306231 7054555|7054555|7054555 7056010|7056010|7056010 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2L + 7055372 7055428 3'utr milt FlyBase G2149.1 ATAGCGAAAAACGATTATTTTTCTAGTCCTACACTGGGTGGGTGCTCGTTTGGCTAT 38 7055392 0.609120628 6 37 350 0.962264151 1.707570176 0.056603774 0.342105263 0.528301887 38 2 0 51 2L:7055372-7055428 7 49.5 921 FBgn0262872 1801.88 44.2 67.81666667 0.027471308 1.119909502 0.729909069 1 1 1 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 2L 7062286 7062291 + 2L_7062286_7062291_+ 1 1 1 0 Mnn1 FBtr0079401|FBtr0110978 7061720|7061720 7062665|7063586 2L + 7062227 7062303 3'utr Mnn1 FlyBase G2734.1 ATTTATGATGTATTTTTAGCTGTTATACTTTATCCCCTATGTATTTATTGCTACAACTATGTGTTTTCCCCTCAAGC 16 7062287 0.987224303 7 16 142 1 1.278753601 0.157894737 0.125 0.263157895 16 0 0 19 2L:7062227-7062303 6 Mnn1 FBtr0079401|FBtr0110978 7061720|7061720 7062665|7063586 TGTGTT 6mer3-8 dme-miR-317-3p 2L + 7062259 7062300 3'utr Mnn1 FlyBase G2158.1 TCCCCTATGTATTTATTGCTACAACTATGTGTTTTCCCCTCA 8 7062292 0.982090946 4 8 60 1 1.176091259 0 0.5 0.733333333 8 0 0 15 2L:7062259-7062300 6 10 922 FBgn0031885 716.3333333 17.91333333 27.53333333 0.013959981 0.558243394 0.363196126 -1 -6 -3.5 0.01 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 2L 7062349 7062355 + 2L_7062349_7062355_+ 0.620204031 0.620204031 0.620204031 0 Mnn1 FBtr0079401|FBtr0110978 7061720|7061720 7062665|7063586 2L + 7062323 7062425 3'utr Mnn1 FlyBase G2735.1 TTTATTGTGTTTAAGCGTAACTTAATTGGTGCTTTTCTTCGAAAACGAATGAGAAATATAGGTTCTGTGTTTGATTTGATCACACCTTGAGGCAAAAATCTTG 157 7062348 0.85260619 15 153 1482 0.967567568 1.951823035 0.07027027 0.133757962 0.264864865 157 5 1 179 2L:7062323-7062425 7 Mnn1 FBtr0079401|FBtr0110978 7061720|7061720 7062665|7063586 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 2L + 7062325 7062425 3'utr Mnn1 FlyBase G2159.1 TATTGTGTTTAAGCGTAACTTAATTGGTGCTTTTCTTCGAAAACGAATGAGAAATATAGGTTCTGTGTTTGATTTGATCACACCTTGAGGCAAAAATCTTG 113 7062348 0.903132634 10 108 1064 0.970930233 1.921686475 0.063953488 0.336283186 0.563953488 113 4 1 167 2L:7062325-7062425 7 114 923 FBgn0031885 716.3333333 17.91333333 27.53333333 0.159143788 6.363974693 4.140435835 1 1 1 0.01 dme-miR-282-5p 7mer-A1 GAGGCTA 2L 7062515 7062521 + 2L_7062515_7062521_+ 0.823349562 0.823349562 0.823349562 0 Mnn1 FBtr0079401|FBtr0110978 7061720|7061720 7062665|7063586 2L + 7062437 7062559 3'utr Mnn1 FlyBase G2736.1 TTGAACAATAACCGAATTGAAGTCCAAATGGATAGACGGACTGCTCGTATTTATGTATTTACTTTAAAGCATTTTATTGAGGCTAAGCTGATTAATTTAACTCTATTTACATATATATCCTCT 239 7062513 0.985110033 18 235 1917 0.989619377 2.456366033 0.429065744 0.179916318 0.321799308 239 3 0 286 2L:7062437-7062559 7 Mnn1 FBtr0079401|FBtr0110978 7061720|7061720 7062665|7063586 GAGGCTA 7mer-A1 dme-miR-282-5p 2L + 7062493 7062541 3'utr Mnn1 FlyBase G2160.2 ATTTACTTTAAAGCATTTTATTGAGGCTAAGCTGATTAATTTAACTCTA 138 7062513 0.746333047 9 133 1089 0.969387755 2.278753601 0.459183673 0.333333333 0.530612245 138 6 0 190 2L:7062493-7062541 7 179 924 FBgn0031885 716.3333333 17.91333333 27.53333333 0.249883667 9.992556755 6.501210654 2 2 2 0.01 dme-miR-11-3p 8mer-m1 CTGTGATG 2L 7062969 7062976 + 2L_7062969_7062976_+ 0.462274223 0.462274223 0.462274223 0 Mnn1 FBtr0110978 7061720 7063586 2L + 7062950 7062983 3'utr Mnn1 FlyBase G2738.1 TGATTTGTGCGTAGAGCATCTGTGATGAATAATA 26 7062968 0.81241145 2 23 151 0.90625 1.462397998 0 0.192307692 0.34375 26 3 0 29 2L:7062950-7062983 8 Mnn1 FBtr0110978 7061720 7063586 CTGTGATG 8mer-m1 dme-miR-11-3p 2L + 7062946 7062995 3'utr Mnn1 FlyBase G2163.1 AATTTGATTTGTGCGTAGAGCATCTGTGATGAATAATAATGTTTAAAAAA 35 7062968 0.952450363 4 33 211 0.959183673 1.672097858 0 0.314285714 0.510204082 35 2 0 47 2L:7062946-7062995 8 30.5 925 FBgn0031885 716.3333333 17.91333333 27.53333333 0.042577943 1.702642352 1.107748184 1 1 1 0.01 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 7069540 7069547 - 2L_7069540_7069547_- 0.631126202 0.63113665 0.631131426 7.35E-06 Pvf2 FBtr0079423 7069534 7070160 2L - 7069528 7069669 3'utr Pvf2 FlyBase G8418.1 AGATTCCCATGTTCCAATCAGAAGTATTGACAAGCAACATTCGAGTGTACTTAAGTTATTGTCGATTAAGTTGACCTCCTAGCTACTTATTTAATATATTTTTGTATCCAATAAATAATACTTCTAGTCACAGCAAGCTATT 537 7069548 0.799274506 20 524 3790 0.977973568 2.221414238 0.249632893 0.22160149 0.386196769 537 12 3 666 2L:7069528-7069669 8 Pvf2 FBtr0079423 7069534 7070160 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 7069489 7069571 3'utr Pvf2 FlyBase G6543.1 TTTTTGTATCCAATAAATAATACTTCTAGTCACAGCAAGCTATTCACTTTTCTGAGTATGGCAATCGTTAGGATTAAGAGCCC 166 7069548 0.706058385 9 153 928 0.931451613 1.664641976 0.028225806 0.337349398 0.556451613 166 13 4 231 2L:7069489-7069571 8 177 926 FBgn0031888 877.1766667 51.15666667 78.84 0.201783753 3.459959601 2.245053272 1 1 1 0.01 dme-miR-968-5p 7mer-A1 CTACTTA 2L 7069581 7069587 - 2L_7069581_7069587_- 0.823349551 0.823349552 0.823349551 0 Pvf2 FBtr0079423 7069534 7070160 2L - 7069528 7069669 3'utr Pvf2 FlyBase G8418.1 AGATTCCCATGTTCCAATCAGAAGTATTGACAAGCAACATTCGAGTGTACTTAAGTTATTGTCGATTAAGTTGACCTCCTAGCTACTTATTTAATATATTTTTGTATCCAATAAATAATACTTCTAGTCACAGCAAGCTATT 537 7069599 0.799274506 20 524 3790 0.977973568 2.221414238 0.249632893 0.22160149 0.386196769 537 12 3 666 2L:7069528-7069669 7 Pvf2 FBtr0079423 7069534 7070160 CTACTTA 7mer-A1 dme-miR-968-5p 2L - 7069573 7069669 3'utr Pvf2 FlyBase G6543.2 AGATTCCCATGTTCCAATCAGAAGTATTGACAAGCAACATTCGAGTGTACTTAAGTTATTGTCGATTAAGTTGACCTCCTAGCTACTTATTTAATAT 180 7069599 0.797816586 12 176 1369 0.976430976 2.462397998 0.31986532 0.45 0.666666667 180 7 0 290 2L:7069573-7069669 7 209 927 FBgn0031888 877.1766667 51.15666667 78.84 0.238264432 4.085489021 2.65093861 12 12 12 0.01 dme-miR-318-3p 7mer-A1 CCAGTGA 2L 7069854 7069860 - 2L_7069854_7069860_- 0.823349562 0.823349562 0.823349562 0 Pvf2 FBtr0079423 7069534 7070160 2L - 7069819 7069887 3'utr Pvf2 FlyBase G8420.1 AATCTTAATTAAGCTGAGTTTAAGATGCCAGTGAAACTAGATAAAATCAGACATTGAGAACTGAAAGTA 23 7069833 0.946241372 6 23 99 1 1.414973348 0.192307692 0.086956522 0.192307692 23 0 0 26 2L:7069819-7069887 7 Pvf2 FBtr0079423 7069534 7070160 CCAGTGA 7mer-A1 dme-miR-318-3p 2L - 7069817 7069877 3'utr Pvf2 FlyBase G6545.1 AAGCTGAGTTTAAGATGCCAGTGAAACTAGATAAAATCAGACATTGAGAACTGAAAGTATT 13 7069833 0.737697084 5 13 55 1 1.301029996 0.15 0.230769231 0.5 13 0 0 20 2L:7069817-7069877 7 8 928 FBgn0031888 877.1766667 51.15666667 78.84 0.00912017 0.156382355 0.101471334 -27 -27 -27 0.01 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 7099159 7099166 - 2L_7099159_7099166_- 0.63113665 0.63113665 0.63113665 0 Pvf3 FBtr0112612|FBtr0342658 7098186|7098186 7100092|7100092 2L - 7099152 7099189 3'utr Pvf3 FlyBase G8436.1 AAATTAAATTTTCATATTTAATTTCTAGTCAAATTTTC 68 7099167 0.743921356 4 67 723 0.988372093 1.929418926 0 0.235294118 0.395348837 68 1 0 85 2L:7099152-7099189 8 Pvf3 FBtr0112612|FBtr0342658 7098186|7098186 7100092|7100092 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 7099151 7099178 3'utr Pvf3 FlyBase G6556.1 TCATATTTAATTTCTAGTCAAATTTTCA 32 7099167 0.738120811 2 32 330 1 1.544068044 0 0.09375 0.171428571 32 0 0 35 2L:7099151-7099178 8 49.5 929 FBgn0085407 30.66666667 0.876666667 1.326666667 1.614130435 56.46387833 37.31155779 1 1 1 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 2L 7099396 7099401 - 2L_7099396_7099401_- 1 1 1 0 Pvf3 FBtr0112612|FBtr0342658 7098186|7098186 7100092|7100092 2L - 7099375 7099435 3'utr Pvf3 FlyBase G8438.1 ATGCGTATGCTAAATGAAATTCCAAATATATAAATTGACTGCGTTTTTAGTTTTAATTGAC 29 7099401 0.893762097 12 28 353 0.96875 1.491361694 0.09375 0.103448276 0.1875 29 1 0 31 2L:7099375-7099435 6 Pvf3 FBtr0112612|FBtr0342658 7098186|7098186 7100092|7100092 TTGACT 6mer3-8 dme-miR-1012-3p 2L - 7099376 7099428 3'utr Pvf3 FlyBase G6558.1 TGCTAAATGAAATTCCAAATATATAAATTGACTGCGTTTTTAGTTTTAATTGA 14 7099401 0.994798206 9 11 153 0.869565217 1.301029996 0 0.428571429 0.652173913 14 3 0 20 2L:7099376-7099428 6 18 930 FBgn0085407 30.66666667 0.876666667 1.326666667 0.586956522 20.53231939 13.5678392 0 0 0 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2L 7099561 7099566 - 2L_7099561_7099566_- 1 1 1 0 Pvf3 FBtr0112612|FBtr0342658 7098186|7098186 7100092|7100092 2L - 7099549 7099594 3'utr Pvf3 FlyBase G8439.1 AAAAATCTGTATCTTAGCAAATGGAAATAAGACTTTTTTGCGCATG 62 7099559 0.755324505 6 61 536 0.960526316 1.86332286 0.026315789 0.161290323 0.315789474 62 3 0 73 2L:7099549-7099594 6 Pvf3 FBtr0112612|FBtr0342658 7098186|7098186 7100092|7100092 AAGACT 6mer3-8 dme-miR-14-3p 2L - 7099552 7099590 3'utr Pvf3 FlyBase G6559.1 ATCTGTATCTTAGCAAATGGAAATAAGACTTTTTTGCGC 28 7099559 0.69526919 4 23 213 0.904761905 1.579783597 0.047619048 0.321428571 0.547619048 28 4 0 38 2L:7099552-7099590 6 44.5 931 FBgn0085407 30.66666667 0.876666667 1.326666667 1.451086957 50.76045627 33.54271357 -7 -7 -7 0.01 dme-miR-1006-3p 7mer-A1 GAATTTA 2L 7099956 7099962 - 2L_7099956_7099962_- 0.823349562 0.823349562 0.823349562 0 Pvf3 FBtr0112611|FBtr0112612|FBtr0301525|FBtr0342658 7099690|7098186|7099690|7098186 7100092|7100092|7100092|7100092 2L - 7099941 7099988 3'utr Pvf3 FlyBase G8441.1 AAGAGTAAAGGCGAAATGAGAGACGTGAATTTAGTTGCATATCCTATA 6 7099959 0.957615934 3 6 32 1 0.77815125 0.5 0 0 6 0 0 6 2L:7099941-7099988 7 Pvf3 FBtr0112611|FBtr0112612|FBtr0301525|FBtr0342658 7099690|7098186|7099690|7098186 7100092|7100092|7100092|7100092 GAATTTA 7mer-A1 dme-miR-1006-3p 2L - 7099941 7099986 3'utr Pvf3 FlyBase G6560.1 GAGTAAAGGCGAAATGAGAGACGTGAATTTAGTTGCATATCCTATA 6 7099972 0.999004622 4 6 30 1 0.77815125 0.5 0 0 6 0 0 6 2L:7099941-7099986 7 5 932 FBgn0085407 30.66666667 0.876666667 1.326666667 0.163043478 5.703422053 3.768844221 -3 10 3.5 0.01 dme-miR-305-5p 7mer-m8 AGTACAA 2L 71085 71091 + 2L_71085_71091_+ 0.643267584 0.643267584 0.643267584 0 dbr FBtr0306539|FBtr0306537|FBtr0078100 70894|70894|70894 71390|71390|71390 2L + 71074 71112 3'utr dbr FlyBase G402.1 AAGTCAAGAATAGTACAACTATTTAAAGAATAACACGAT 11 71084 0.889820457 2 11 67 1 1.079181246 0 0.090909091 0.166666667 11 0 0 12 2L:71074-71112 7 dbr FBtr0306539|FBtr0306537|FBtr0078100 70894|70894|70894 71390|71390|71390 AGTACAA 7mer-m8 dme-miR-305-5p 2L + 71036 71102 3'utr dbr FlyBase G338.1 TTTATTAAAAGCAATGGCTGGAGTCTACACACGAAAATAAGTCAAGAATAGTACAACTATTTAAAGA 22 71084 0.806308425 7 21 94 0.939393939 1.491361694 0.090909091 0.409090909 0.606060606 22 2 0 31 2L:71036-71102 7 9 933 FBgn0067779 850.6933333 26.96666667 41.62666667 0.010579606 0.333745365 0.216207559 1 1 1 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 71200 71205 + 2L_71200_71205_+ 1 1 1 0 dbr FBtr0306539|FBtr0306537|FBtr0078100 70894|70894|70894 71390|71390|71390 2L + 71144 71267 3'utr dbr FlyBase G403.1 TCGATTAATTATTCAGCGCTTAAGTTTTCTTTTGGGTTAAGTTTTGAACATATAATGTACCTTCTGGTGTATGTTAACATAAAATCCAGAATATGCCTTTAGACAGCAGAACGGAAGATATTTA 38 71199 0.987040899 10 35 308 0.918367347 1.352182518 0.469387755 0.210526316 0.387755102 38 3 1 45 2L:71144-71267 6 dbr FBtr0306539|FBtr0306537|FBtr0078100 70894|70894|70894 71390|71390|71390 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 71177 71217 3'utr dbr FlyBase G339.1 GGGTTAAGTTTTGAACATATAATGTACCTTCTGGTGTATGT 25 71199 0.804881606 3 25 214 1 1.591064607 0.179487179 0.4 0.615384615 25 0 0 39 2L:71177-71217 6 27 934 FBgn0067779 850.6933333 26.96666667 41.62666667 0.031738817 1.001236094 0.648622678 1 1 1 0.01 dme-miR-965-3p 7mer-m8 TACGCTT 2L 7185357 7185363 + 2L_7185357_7185363_+ 0.620204855 0.620204855 0.620204855 0 CG4495 FBtr0079405|FBtr0113028 7185291|7185291 7185519|7185529 2L + 7185317 7185388 3'utr CG4495 FlyBase G2745.1 CGCTTCAAGCGCCCCAATCTTAGTCACTTTTTCCTACGCTTACGCTTTTTACTATTTATTTTTGTAGTTAAC 34 7185355 0.991689567 8 33 357 1 1.633468456 0.023255814 0.264705882 0.418604651 34 0 0 43 2L:7185317-7185388 7 CG4495 FBtr0079405|FBtr0113028 7185291|7185291 7185519|7185529 TACGCTT 7mer-m8 dme-miR-965-3p 2L + 7185306 7185371 3'utr CG4495 FlyBase G2169.1 GTGGATTCTCCCGCTTCAAGCGCCCCAATCTTAGTCACTTTTTCCTACGCTTACGCTTTTTACTAT 21 7185356 0.912091063 9 20 199 0.967741935 1.477121255 0 0.380952381 0.580645161 21 1 0 30 2L:7185306-7185371 7 23.5 935 FBgn0031893 272.69 17.27 26.35 0.086178444 1.36074117 0.891840607 2 1 1.5 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 2L 7190783 7190788 - 2L_7190783_7190788_- 1 1 1 0 CG4497 FBtr0079418|FBtr0302948 7190429|7190429 7191401|7191401 2L - 7190748 7190814 3'utr CG4497 FlyBase G8445.1 TAGCCAGAGTTTATTGCCTCGATCTTTGTGTTATAGAATGTTTTCCCATTTCCAATGTTTCGGTTAA 15 7190790 0.986409356 6 15 131 1 1.230448921 0.058823529 0.133333333 0.235294118 15 0 0 17 2L:7190748-7190814 6 CG4497 FBtr0079418|FBtr0302948 7190429|7190429 7191401|7191401 TGTGTT 6mer3-8 dme-miR-317-3p 2L - 7190773 7190809 3'utr CG4497 FlyBase G6562.1 AGAGTTTATTGCCTCGATCTTTGTGTTATAGAATGTT 10 7190789 0.694115088 5 10 98 1 1.204119983 0 0.6 0.75 10 0 0 16 2L:7190773-7190809 6 9 936 FBgn0031895 127.87 6.053333333 9.286666667 0.070383984 1.486784141 0.969131371 2 1 1.5 0.01 dme-miR-283-5p 6mer3-8 TGATAT 2L 7195075 7195080 - 2L_7195075_7195080_- 1 1 1 0 CG4502 FBtr0079416|FBtr0079417 7194906|7194906 7195555|7195555 2L - 7194956 7195112 3'utr CG4502 FlyBase G8450.1 AAGTTATATAAGATTTACAGAATCAATTAGTCTGATATCTTGGTTCGACTGTGTTATAATTTGTTGTGATTTTTGTTGAACTTAAACAAACCGTGAATAAACCAAATTACAACATCAGCTTGTAAACATAAGTGTGTTCCTCGAACTTCGCACTTTC 114 7195086 0.978657045 26 110 1054 0.962962963 2.113943352 0.125925926 0.157894737 0.288888889 114 5 0 130 2L:7194956-7195112 6 CG4502 FBtr0079416|FBtr0079417 7194906|7194906 7195555|7195555 TGATAT 6mer3-8 dme-miR-283-5p 2L - 7194997 7195110 3'utr CG4502 FlyBase G6565.1 GTTATATAAGATTTACAGAATCAATTAGTCTGATATCTTGGTTCGACTGTGTTATAATTTGTTGTGATTTTTGTTGAACTTAAACAAACCGTGAATAAACCAAATTACAACATC 77 7195086 0.910032319 16 75 644 0.981818182 1.73239376 0.1 0.337662338 0.536363636 77 1 1 108 2L:7194997-7195110 6 63.5 937 FBgn0031896 751.2833333 44.36333333 68.21333333 0.08452204 1.431362236 0.930903049 6 6 6 0.01 dme-miR-8-3p 7mer-A1 AGTATTA 2L 7195195 7195201 - 2L_7195195_7195201_- 0.823322102 0.823349562 0.823335832 1.94E-05 CG4502 FBtr0079416|FBtr0079417 7194906|7194906 7195555|7195555 2L - 7195175 7195214 3'utr CG4502 FlyBase G8451.1 AAATGGATATTTAAGTATTATTAGTTAAACAGGAACAAAA 11 7195205 0.992192846 5 9 109 0.846153846 1.041392685 0.307692308 0.181818182 0.307692308 11 2 0 11 2L:7195175-7195214 7 CG4502 FBtr0079416|FBtr0079417 7194906|7194906 7195555|7195555 AGTATTA 7mer-A1 dme-miR-8-3p 2L - 7195176 7195236 3'utr CG4502 FlyBase G6566.1 ATAGGAAGTTTCGCCGAATACAAAATGGATATTTAAGTATTATTAGTTAAACAGGAACAAA 11 7195204 0.992249327 5 8 83 0.769230769 0.698970004 0.230769231 0.181818182 0.307692308 11 2 1 10 2L:7195176-7195236 7 10 938 FBgn0031896 751.2833333 44.36333333 68.21333333 0.013310557 0.225411376 0.146598905 4 3 3.5 0.01 dme-miR-283-5p 7mer-A1 GATATTA 2L 7205346 7205352 - 2L_7205346_7205352_- 0.782911824 0.782911824 0.782911824 0 CG13784 FBtr0110799|FBtr0330197|FBtr0330199|FBtr0330198 7205251|7204536|7205251|7205251 7208015|7208015|7206347|7206347 2L - 7205337 7205411 3'utr CG13784 FlyBase G8457.1 ATTTTGTAGCCCTGTAAGTTCAATTTGTATTAAAATCAACAAAATCAAACTTTAATCTCGATATTATTCTTTAAA 31 7205360 0.71730796 9 28 251 0.894736842 0.929418926 0.078947368 0.225806452 0.368421053 31 1 3 34 2L:7205337-7205411 7 CG13784 FBtr0330198|FBtr0330199|FBtr0330197|FBtr0110799 7205251|7205251|7204536|7205251 7206347|7206347|7208015|7208015 GATATTA 7mer-A1 dme-miR-283-5p 2L - 7205340 7205407 3'utr CG13784 FlyBase G6572.1 TGTAGCCCTGTAAGTTCAATTTGTATTAAAATCAACAAAATCAAACTTTAATCTCGATATTATTCTTT 18 7205360 0.734807248 6 18 150 1 1.431363764 0.074074074 0.277777778 0.518518519 18 0 0 27 2L:7205340-7205407 7 17 939 FBgn0031897 1244.07 88.35 137.0766667 0.013664826 0.192416525 0.124018189 8 8 8 0.01 dme-miR-1006-3p 7mer-A1 GAATTTA 2L 7205608 7205614 - 2L_7205608_7205614_- 0.823349562 0.823349513 0.823349538 7.07E-08 CG13784 FBtr0110799|FBtr0330197|FBtr0330199|FBtr0330198 7205251|7204536|7205251|7205251 7208015|7208015|7206347|7206347 2L - 7205566 7205631 3'utr CG13784 FlyBase G8459.1 TTAGTTTCGGACAATGTGAATTTAAAGAAAAGGGTTTCAGCTGGGGAAGGGACCAAGCCAGAGTTG 33 7205611 0.975910644 8 32 207 0.95 1.579783597 0.175 0.212121212 0.35 33 2 0 38 2L:7205566-7205631 7 CG13784 FBtr0330198|FBtr0330199|FBtr0330197|FBtr0110799 7205251|7205251|7204536|7205251 7206347|7206347|7208015|7208015 GAATTTA 7mer-A1 dme-miR-1006-3p 2L - 7205582 7205717 3'utr CG13784 FlyBase G6573.1 ACTAGAACATAAAACCAATGTACATTACTTCTTATGTGAGATGCAGCTACAAAAATTAGCTTACAATGTAAACTAGTTTTAAACATTTAGTTTCGGACAATGTGAATTTAAAGAAAAGGGTTTCAGCTGGGGAAGG 77 7205611 0.984363879 17 71 562 0.924369748 1.740362689 0.12605042 0.38961039 0.605042017 77 8 1 110 2L:7205582-7205717 7 26 940 FBgn0031897 1244.07 88.35 137.0766667 0.020899146 0.294284097 0.189674878 -3 -3 -3 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 2L 7207694 7207700 - 2L_7207694_7207700_- 0.823349562 0.823349562 0.823349562 0 CG13784 FBtr0110799|FBtr0330197 7205251|7204536 7208015|7208015 2L - 7207640 7207769 3'utr CG13784 FlyBase G8464.1 AAGGATGATAGCAGTATGGCAGCTGCCTTGGAGGTCGTCATTGTCCATTCCCCGGCATCCAAAGAGCCGAGACTGATTGGCGCTCAGGAGGAGAGTGGGCGCTGTCGCAGGAAGCAAAATAATGCCACCC 55 7207693 0.942347127 7 54 218 0.968253968 1.785329835 0.174603175 0.145454545 0.253968254 55 2 0 61 2L:7207640-7207769 7 CG13784 FBtr0330197|FBtr0110799 7204536|7205251 7208015|7208015 AGACTGA 7mer-A1 dme-miR-14-3p 2L - 7207665 7207710 3'utr CG13784 FlyBase G6577.1 CAAAGAGCCGAGACTGATTGGCGCTCAGGAGGAGAGTGGGCGCTGT 27 7207693 0.894086008 2 27 80 1 1.591064607 0.025641026 0.333333333 0.538461538 27 0 0 39 2L:7207665-7207710 7 31 941 FBgn0031897 1244.07 88.35 137.0766667 0.024918212 0.350877193 0.226150816 -7 -7 -7 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 7220413 7220420 - 2L_7220413_7220420_- 0.650171355 0.65017135 0.650171352 0 ico FBtr0079413|FBtr0079413|FBtr0079413 7220367|7220367|7220367 7220532|7220532|7220532 2L - 7220382 7220440 3'utr ico FlyBase G8472.1 ACAACAATTTTCAGTTTTCACTGTGATAAATGCGAAGTGTACAGTTATTTGTATAATAA 23 7220425 0.987635954 8 20 183 0.870967742 1.431363764 0.096774194 0.304347826 0.483870968 23 4 0 27 2L:7220382-7220440 8 ico FBtr0079413|FBtr0079413|FBtr0079413 7220367|7220367|7220367 7220532|7220532|7220532 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 7220401 7220429 3'utr ico FlyBase G6584.1 CAGTTTTCACTGTGATAAATGCGAAGTGT 14 7220424 0.834684988 4 10 106 0.823529412 1.146128036 0 0.214285714 0.352941176 14 3 0 14 2L:7220401-7220429 8 18.5 942 FBgn0263133 394.38 19.21 29.5 0.046909072 0.963040083 0.627118644 5 4 4.5 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 2L 7226705 7226711 - 2L_7226705_7226711_- 0.620204266 0.620204266 0.620204266 0 Ndae1 FBtr0331659|FBtr0331662|FBtr0299538|FBtr0331661|FBtr0331663|FBtr0331660|FBtr0299537 7226136|7226136|7226460|7226460|7226460|7226460|7226460 7226914|7226914|7226914|7226914|7226914|7226914|7226914 2L - 7226681 7226758 3'utr Ndae1 FlyBase G8477.1 ACAAAACCAACGATAAACTCAATTATTTATAGATTTTTTTAATAATTTGCATTTTGTCGGCCTTGATACATTTTATTG 12 7226695 0.987914998 5 11 113 0.916666667 1.041392685 0 0 0 12 1 0 11 2L:7226681-7226758 7 Ndae1 FBtr0299537|FBtr0331660|FBtr0331663|FBtr0331661|FBtr0299538|FBtr0331662|FBtr0331659 7226460|7226460|7226460|7226460|7226460|7226136|7226136 7226914|7226914|7226914|7226914|7226914|7226914|7226914 TGCATTT 7mer-m8 dme-miR-277-3p 2L - 7226673 7226759 3'utr Ndae1 FlyBase G6588.1 CACAAAACCAACGATAAACTCAATTATTTATAGATTTTTTTAATAATTTGCATTTTGTCGGCCTTGATACATTTTATTGAACTAGTT 8 7226712 0.989669798 6 8 78 1 1.041392685 0 0.25 0.454545455 8 0 0 11 2L:7226673-7226759 7 6.5 943 FBgn0259111 820.0933333 22.69 34.66 0.007925927 0.28646981 0.187536065 -16 1 -7.5 0.01 dme-miR-8-3p 6mer2-7 AGTATT 2L 7384631 7384636 - 2L_7384631_7384636_- 0.999999992 0.999999039 0.999999515 7.07E-07 CG5149 FBtr0079469 7384484 7384886 2L - 7384597 7384674 3'utr CG5149 FlyBase G8484.1 ATACAATGTATAATGGATATAGTTTATGAAATACTGAGAGTATTGTTGTTGCGTTTTAGATCTTAAAGTGAGAAAAGT 10 7384664 0.776102219 8 10 83 1 1.041392685 0.363636364 0.1 0.181818182 10 0 0 11 2L:7384597-7384674 6 CG5149 FBtr0079469 7384484 7384886 AGTATT 6mer2-7 dme-miR-8-3p 2L - 7384603 7384670 3'utr CG5149 FlyBase G6591.1 AATGTATAATGGATATAGTTTATGAAATACTGAGAGTATTGTTGTTGCGTTTTAGATCTTAAAGTGAG 5 7384640 0.972724857 5 5 44 1 0.698970004 0.2 0 0 5 0 0 5 2L:7384603-7384670 6 2.5 944 FBgn0031904 297.6666667 19.02666667 29.12333333 0.008398656 0.131394534 0.085841822 28 4 16 0.01 dme-miR-1003-3p 7mer-A1 TGTGAGA 2L 7384830 7384836 - 2L_7384830_7384836_- 0.823349266 0.823349562 0.823349414 2.12E-07 CG5149 FBtr0079469 7384484 7384886 2L - 7384781 7384859 3'utr CG5149 FlyBase G8486.1 GTTTTGTTTTATCATCGAGAATTTGTGAGACCATGCCCGATATGGGTGTGCAGTTAATGATTCAATTCAGTTTCCTTAG 20 7384837 0.979498461 5 20 144 1 1.361727836 0.304347826 0.15 0.260869565 20 0 0 23 2L:7384781-7384859 7 CG5149 FBtr0079469 7384484 7384886 TGTGAGA 7mer-A1 dme-miR-1003-3p 2L - 7384818 7384860 3'utr CG5149 FlyBase G6592.1 AGTTTTGTTTTATCATCGAGAATTTGTGAGACCATGCCCGATA 14 7384838 0.93459576 3 14 76 1 1.255272505 0.166666667 0.214285714 0.388888889 14 0 0 18 2L:7384818-7384860 7 15.5 945 FBgn0031904 297.6666667 19.02666667 29.12333333 0.052071669 0.814646111 0.532219297 1 2 1.5 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 2L 7430619 7430624 - 2L_7430619_7430624_- 1 1 1 0 CG5958 FBtr0079466 7430528 7430672 2L - 7430548 7430650 3'utr CG5958 FlyBase G8499.1 CTGACATTCGCATCCTACATTGACATTAGCTTAACTTTATGCTTGTAAATACTTTCAATATGTGTTTGCTTAGTTCGTAACATTTTGGCAATAAACTAGTTAC 47 7430631 0.987959369 20 47 429 1 1.792391689 0.129032258 0.234042553 0.419354839 47 0 0 62 2L:7430548-7430650 6 CG5958 FBtr0079466 7430528 7430672 TAGCTT 6mer3-8 dme-miR-79-3p 2L - 7430547 7430649 3'utr CG5958 FlyBase G6600.1 TGACATTCGCATCCTACATTGACATTAGCTTAACTTTATGCTTGTAAATACTTTCAATATGTGTTTGCTTAGTTCGTAACATTTTGGCAATAAACTAGTTACA 22 7430631 0.988092646 12 21 189 0.970588235 1.51851394 0.294117647 0.363636364 0.588235294 22 1 0 33 2L:7430547-7430649 6 22.5 946 FBgn0031913 754 78.02 117.9766667 0.029840849 0.288387593 0.190715678 7 7 7 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2L 7472557 7472562 - 2L_7472557_7472562_- 1 1 1 0 Ziz FBtr0330722|FBtr0330726|FBtr0330724|FBtr0332201|FBtr0330721|FBtr0330728|FBtr0330723|FBtr0330725|FBtr0330727 7472511|7472511|7472511|7472511|7472511|7472511|7472511|7472511|7472511 7473645|7473645|7473645|7473110|7473645|7473645|7473645|7473645|7473645 2L - 7472520 7472600 3'utr Ziz FlyBase G8508.1 TAACAGATCTACGGATATATATTTACATACATGCATTTTCTAGTGAAATCGTATAATGAACTAAATACAAATATACGCATT 71 7472563 0.987798644 10 70 629 0.988636364 1.638489257 0.011363636 0.211267606 0.363636364 71 0 1 87 2L:7472520-7472600 6 Ziz FBtr0330725|FBtr0330727|FBtr0330728|FBtr0330723|FBtr0332201|FBtr0330721|FBtr0330722|FBtr0330726|FBtr0330724 7472511|7472511|7472511|7472511|7472511|7472511|7472511|7472511|7472511 7473645|7473645|7473645|7473645|7473110|7473645|7473645|7473645|7473645 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2L - 7472539 7472680 3'utr Ziz FlyBase G6606.1 AATTAGTTTTAGTGTTAGACAAATAAGTTCCCGCAAGCAACAGAACTTACCAAAGTATTCAGATAAAGGAAAAACCTATTTAACAGATCTACGGATATATATTTACATACATGCATTTTCTAGTGAAATCGTATAATGAACT 104 7472563 0.971371604 15 100 586 0.959183673 1.672097858 0.020408163 0.346153846 0.537414966 104 4 2 141 2L:7472539-7472680 6 48.5 947 FBgn0260486 1355.053333 19.13333333 29.37 0.035791949 2.534843206 1.65134491 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2L 7472626 7472632 - 2L_7472626_7472632_- 0.671796082 0.671796082 0.671796082 0 Ziz FBtr0330722|FBtr0330726|FBtr0330724|FBtr0332201|FBtr0330721|FBtr0330728|FBtr0330723|FBtr0330725|FBtr0330727 7472511|7472511|7472511|7472511|7472511|7472511|7472511|7472511|7472511 7473645|7473645|7473645|7473110|7473645|7473645|7473645|7473645|7473645 2L - 7472604 7472682 3'utr Ziz FlyBase G8509.1 GAAATTAGTTTTAGTGTTAGACAAATAAGTTCCCGCAAGCAACAGAACTTACCAAAGTATTCAGATAAAGGAAAAACCT 109 7472633 0.796257468 8 108 470 0.991935484 2.089905111 0.048387097 0.119266055 0.225806452 109 1 0 123 2L:7472604-7472682 7 Ziz FBtr0330725|FBtr0330727|FBtr0330728|FBtr0330723|FBtr0332201|FBtr0330721|FBtr0330722|FBtr0330726|FBtr0330724 7472511|7472511|7472511|7472511|7472511|7472511|7472511|7472511|7472511 7473645|7473645|7473645|7473645|7473110|7473645|7473645|7473645|7473645 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 7472539 7472680 3'utr Ziz FlyBase G6606.1 AATTAGTTTTAGTGTTAGACAAATAAGTTCCCGCAAGCAACAGAACTTACCAAAGTATTCAGATAAAGGAAAAACCTATTTAACAGATCTACGGATATATATTTACATACATGCATTTTCTAGTGAAATCGTATAATGAACT 104 7472633 0.971371604 15 100 586 0.959183673 1.672097858 0.020408163 0.346153846 0.537414966 104 4 2 141 2L:7472539-7472680 7 83.5 948 FBgn0260486 1355.053333 19.13333333 29.37 0.061621191 4.364111498 2.843037113 1 1 1 0.01 dme-miR-7-5p 6mer3-8 GTCTTC 2L 7472742 7472747 - 2L_7472742_7472747_- 1 1 1 0 Ziz FBtr0330722|FBtr0330726|FBtr0330724|FBtr0332201|FBtr0330721|FBtr0330728|FBtr0330723|FBtr0330725|FBtr0330727 7472511|7472511|7472511|7472511|7472511|7472511|7472511|7472511|7472511 7473645|7473645|7473645|7473110|7473645|7473645|7473645|7473645|7473645 2L - 7472713 7472760 3'utr Ziz FlyBase G8510.1 CTGCTAACTTTGTGTCTTCTTCAGAACTCCAAATGGCTAAGGAATCGT 10 7472744 0.982387088 6 9 81 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 2L:7472713-7472760 6 Ziz FBtr0330725|FBtr0330727|FBtr0330728|FBtr0330723|FBtr0332201|FBtr0330721|FBtr0330722|FBtr0330726|FBtr0330724 7472511|7472511|7472511|7472511|7472511|7472511|7472511|7472511|7472511 7473645|7473645|7473645|7473645|7473110|7473645|7473645|7473645|7473645 GTCTTC 6mer3-8 dme-miR-7-5p 2L - 7472725 7472758 3'utr Ziz FlyBase G6607.1 GCTAACTTTGTGTCTTCTTCAGAACTCCAAATGG 5 7472727 0.947560229 3 4 40 0.8 0.602059991 0.6 0 0 5 1 0 4 2L:7472725-7472758 6 6 949 FBgn0260486 1355.053333 19.13333333 29.37 0.00442787 0.31358885 0.204290092 -3 -20 -11.5 0.01 dme-miR-965-3p 6mer3-8 TACGCT 2L 76150 76155 + 2L_76150_76155_+ 1 1 1 0 galectin FBtr0331680|FBtr0302164|FBtr0301733|FBtr0078101|FBtr0306540 76097|76097|76097|76097|76097 76211|76211|76211|76211|76211 2L + 76126 76181 3'utr galectin FlyBase G418.1 AGTTTAGCGACAATAAAAAAGTGATACGCTCGTGTTTCATTATACAATATTTTTGT 108 76150 0.834531796 8 105 633 0.974789916 2.064457989 0.25210084 0.074074074 0.159663866 108 3 0 116 2L:76126-76181 6 galectin FBtr0306540|FBtr0078101|FBtr0301733|FBtr0302164|FBtr0331680 76097|76097|76097|76097|76097 76211|76211|76211|76211|76211 TACGCT 6mer3-8 dme-miR-965-3p 2L + 76123 76174 3'utr galectin FlyBase G354.1 AGTAGTTTAGCGACAATAAAAAAGTGATACGCTCGTGTTTCATTATACAATA 67 76150 0.821748983 9 65 381 0.97826087 1.954242509 0.27173913 0.298507463 0.489130435 67 2 0 90 2L:76123-76174 6 85.5 950 FBgn0031213 880.07 63.82 97.16666667 0.097151363 1.339705421 0.879931389 0 0 0 0.01 dme-miR-980-5p 6mer2-7 AAAAAC 2L 7723243 7723248 - 2L_7723243_7723248_- 1 1 1 0 CG13795 FBtr0343407 7723043 7723555 2L - 7723238 7723286 3'utr CG13795 FlyBase G8579.1 TTACATAGTTTGTCTATCGAGAGAGAGAGAGAGCTTTTAAAAACGTGTA 26 7723250 0.74404892 6 25 125 0.965517241 1.447158031 0.103448276 0.115384615 0.206896552 26 1 0 28 2L:7723238-7723286 6 CG13795 FBtr0343407 7723043 7723555 AAAAAC 6mer2-7 dme-miR-980-5p 2L - 7723239 7723277 3'utr CG13795 FlyBase G6651.1 TTGTCTATCGAGAGAGAGAGAGAGCTTTTAAAAACGTGT 16 7723250 0.717494537 3 16 80 1 1.380211242 0.041666667 0.4375 0.625 16 0 0 24 2L:7723239-7723277 6 18.5 951 FBgn0031937 195.5733333 10.18333333 15.44666667 0.094593673 1.816693944 1.1976694 2 2 2 0.01 dme-miR-33-5p 7mer-A1 AATGCAA 2L 7786470 7786476 - 2L_7786470_7786476_- 0.782911824 0.782911824 0.782911824 0 CG7149 FBtr0079496 7786158 7786899 2L - 7786433 7786481 3'utr CG7149 FlyBase G8599.1 ATGATAATGCAAAGGCTATGTTCACTGTACCGCCCATCGTATTGTAATT 14 7786454 0.772365507 5 11 102 0.866666667 0.812913357 0.133333333 0.071428571 0.133333333 14 1 1 13 2L:7786433-7786481 7 CG7149 FBtr0079496 7786158 7786899 AATGCAA 7mer-A1 dme-miR-33-5p 2L - 7786437 7786476 3'utr CG7149 FlyBase G6662.1 AATGCAAAGGCTATGTTCACTGTACCGCCCATCGTATTGT 10 7786455 0.761924129 4 9 61 0.933333333 1.146128036 0.266666667 0.4 0.6 10 1 0 14 2L:7786437-7786476 7 5 952 FBgn0031948 141.2833333 6.946666667 10.71666667 0.035389878 0.719769674 0.466562986 -22 -21 -21.5 0.01 dme-miR-305-3p 7mer-m8 ATGTGCC 2L 7786514 7786520 - 2L_7786514_7786520_- 0.674515655 0.674515655 0.674515655 0 CG7149 FBtr0079496 7786158 7786899 2L - 7786496 7786537 3'utr CG7149 FlyBase G8600.1 ATGATCCGATAAGTATTATGTGCCTGAAGACAGCTACTGAAT 119 7786519 0.694548704 4 119 689 1 2.158362492 0.159722222 0.159663866 0.305555556 119 0 0 144 2L:7786496-7786537 7 CG7149 FBtr0079496 7786158 7786899 ATGTGCC 7mer-m8 dme-miR-305-3p 2L - 7786495 7786540 3'utr CG7149 FlyBase G6663.1 TGCATGATCCGATAAGTATTATGTGCCTGAAGACAGCTACTGAATG 79 7786519 0.688869565 4 79 451 1 2.06069784 0.243478261 0.291139241 0.513043478 79 0 0 115 2L:7786495-7786540 7 99 953 FBgn0031948 141.2833333 6.946666667 10.71666667 0.700719594 14.25143954 9.237947123 -1 -1 -1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 7786831 7786837 - 2L_7786831_7786837_- 0.801228013 0.801970355 0.801599184 0.000524956 CG7149 FBtr0079496|FBtr0079496|FBtr0079496|FBtr0343406|FBtr0343406|FBtr0343406 7786158|7786158|7786158|7786158|7786158|7786158 7786899|7786899|7786899|7786899|7786899|7786899 2L - 7786804 7786852 3'utr CG7149 FlyBase G8601.1 CAAAATCAACCATCTTGTGATATATAGTATATATACATATATATATAAA 27 7786839 0.9920715 6 20 234 0.724137931 0.720159303 0.034482759 0.074074074 0.137931034 27 5 3 21 2L:7786804-7786852 7 CG7149 FBtr0079496|FBtr0079496|FBtr0079496|FBtr0343406|FBtr0343406|FBtr0343406 7786158|7786158|7786158|7786158|7786158|7786158 7786899|7786899|7786899|7786899|7786899|7786899 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 7786814 7786852 3'utr CG7149 FlyBase G6665.1 CAAAATCAACCATCTTGTGATATATAGTATATATACATA 16 7786838 0.743488012 4 14 137 0.875 1.021189299 0 0.3125 0.541666667 16 2 1 21 2L:7786814-7786852 7 21 954 FBgn0031948 141.2833333 6.946666667 10.71666667 0.14863749 3.02303263 1.959564541 2 1 1.5 0.01 dme-miR-986-5p 6mer3-8 ATTCGA 2L 7791360 7791365 - 2L_7791360_7791365_- 1 1 1 0 LKR FBtr0343404 7791173 7791757 2L - 7791337 7791397 3'utr LKR FlyBase G8604.1 ATTCCAATTTTCCGTGCGATTTAATCTTTAAGATTCGATTTCCGTTCGATTGTCCCTGTAG 15 7791358 0.778500007 4 14 136 0.944444444 1.230448921 0.111111111 0.2 0.333333333 15 1 0 17 2L:7791337-7791397 6 LKR FBtr0343404 7791173 7791757 ATTCGA 6mer3-8 dme-miR-986-5p 2L - 7791323 7791394 3'utr LKR FlyBase G6667.1 CCAATTTTCCGTGCGATTTAATCTTTAAGATTCGATTTCCGTTCGATTGTCCCTGTAGCGCCTGGCAACCCG 7 7791358 0.98588637 3 7 60 1 1.079181246 0.166666667 0.571428571 0.75 7 0 0 12 2L:7791323-7791394 6 8 955 FBgn0025687 1820.93 67.29333333 103.6233333 0.004393359 0.118882504 0.077202689 -7 -7 -7 0.01 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2L 7791562 7791567 - 2L_7791562_7791567_- 0.999999998 0.982876791 0.991438394 0.012107931 LKR FBtr0079495|FBtr0343404 7791404|7791173 7791757|7791757 2L - 7791481 7791570 3'utr LKR FlyBase G8605.1 AAGTTGAAGTCGTTGTCCAAATTGTGAAACATGTTTCCTTAACGTGAATTCACTACGAGCCTGATTGTAAGTGATTAAATATTTATGGAA 50 7791549 0.78502464 15 50 360 1 1.77815125 0.266666667 0.12 0.266666667 50 0 0 60 2L:7791481-7791570 6 LKR FBtr0079495|FBtr0343404 7791404|7791173 7791757|7791757 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2L - 7791484 7791597 3'utr LKR FlyBase G6668.1 AACTAGAGCTACTTGACGTACGTAAACAAGTTGAAGTCGTTGTCCAAATTGTGAAACATGTTTCCTTAACGTGAATTCACTACGAGCCTGATTGTAAGTGATTAAATATTTATG 44 7791549 0.784713259 11 41 317 0.955882353 1.511883361 0.147058824 0.409090909 0.617647059 44 2 1 65 2L:7791484-7791597 6 21.5 956 FBgn0025687 1820.93 67.29333333 103.6233333 0.011807153 0.319496731 0.207482227 -18 -18 -18 0.01 dme-miR-34-5p 6mer2-7 ACTGCC 2L 7791694 7791699 - 2L_7791694_7791699_- 0.995821982 0.99866208 0.997242031 0.002008254 LKR FBtr0079495|FBtr0343404 7791404|7791173 7791757|7791757 2L - 7791651 7791805 stop_codon LKR FlyBase G8606.1 CGCTCCGAGGGTCTGACTGCCACGGAAACCTCCAGATGGCTAAATTAAGTGATCTTAACTGATCCCGAGAAAATAGGCTTAAGTCTTCATTAATATTACTTTTTTGACTGCCCACCGCGTCGGGTGATACTTCTTGTTTTATCGCTCGGGTATTT 206 7791686 0.978352842 24 189 1276 0.925925926 1.653212514 0.152263374 0.165048544 0.29218107 206 14 4 225 2L:7791651-7791805 6 LKR FBtr0079495|FBtr0343404 7791404|7791173 7791757|7791757 ACTGCC 6mer2-7 dme-miR-34-5p 2L - 7791654 7791805 stop_codon LKR FlyBase G6669.1 CGCTCCGAGGGTCTGACTGCCACGGAAACCTCCAGATGGCTAAATTAAGTGATCTTAACTGATCCCGAGAAAATAGGCTTAAGTCTTCATTAATATTACTTTTTTGACTGCCCACCGCGTCGGGTGATACTTCTTGTTTTATCGCTCGGGTA 131 7791686 0.964811439 20 115 750 0.882051282 1.758407192 0.174358974 0.351145038 0.564102564 131 21 2 172 2L:7791654-7791805 6 86.5 957 FBgn0025687 1820.93 67.29333333 103.6233333 0.047503199 1.285417079 0.834754077 -13 -13 -13 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 7796640 7796645 - 2L_7796640_7796645_- 1 1 1 0 Herp FBtr0343403|FBtr0079493 7796312|7796544 7796929|7796929 2L - 7796624 7796665 3'utr Herp FlyBase G8627.1 AAGAACGTACTCTGTTTTTGATGTGAATAGTAGAATGTTTAT 7 7796650 0.986193808 7 7 59 1 1 0.3 0.285714286 0.5 7 0 0 10 2L:7796624-7796665 6 Herp FBtr0343403|FBtr0079493 7796312|7796544 7796929|7796929 ATGTGA 6mer3-8 dme-miR-1003-3p 2L - 7796571 7796657 3'utr Herp FlyBase G6686.1 ACTCTGTTTTTGATGTGAATAGTAGAATGTTTATAATCTGCACTGCAATCTGTGCTAGAGACGAACCTATGAAACCAAGATGCAATT 11 7796648 0.985970738 7 10 79 0.9375 1.176091259 0.0625 0.454545455 0.625 11 1 0 15 2L:7796571-7796657 6 5.5 958 FBgn0031950 371.7266667 21.11 32.2 0.014795818 0.260540028 0.170807453 5 3 4 0.01 dme-miR-92b-3p 6mer2-7 TGCAAT 2L 7820628 7820633 + 2L_7820628_7820633_+ 0.984679636 1 0.992339818 0.010833159 LanB1 FBtr0079491|FBtr0079490 7820389|7820389 7820771|7820771 2L + 7820477 7820760 3'utr LanB1 FlyBase G2842.1 CATCTAAATTGCCATATTCATGAACAAATAAGCAAATTGCGAAATACGAGAATCAAGTAAAGAACTACAAGAACAACTAGGAAGGCGACAGTTATTATGTAACCACTGTTAAGTTACCGTTACGTTTTGTACTCTAAGCGAAAACCAACACTGCAATGTTAATTTTAAAAATTGAGCGAAAGAAATCGATGCCTTCACTTTTAATGTGTACACACTGAGCTAAGTTTTTCTTATACTATCCCTATACCATTTTGTAATGCAATTAATGTAATTAAATAAAACTA 210 7820634 0.95072908 51 203 1356 0.969581749 2.40654018 0.091254753 0.214285714 0.372623574 210 8 0 255 2L:7820477-7820760 6 LanB1 FBtr0079490|FBtr0079491 7820389|7820389 7820771|7820771 TGCAAT 6mer2-7 dme-miR-92b-3p 2L + 7820482 7820704 3'utr LanB1 FlyBase G2242.1 AAATTGCCATATTCATGAACAAATAAGCAAATTGCGAAATACGAGAATCAAGTAAAGAACTACAAGAACAACTAGGAAGGCGACAGTTATTATGTAACCACTGTTAAGTTACCGTTACGTTTTGTACTCTAAGCGAAAACCAACACTGCAATGTTAATTTTAAAAATTGAGCGAAAGAAATCGATGCCTTCACTTTTAATGTGTACACACTGAGCTAAGTTTT 100 7820634 0.902890668 31 93 556 0.958333333 1.729704621 0.053571429 0.49 0.696428571 100 5 2 161 2L:7820482-7820704 6 34.5 959 FBgn0261800 22089.71333 425.3966667 651.42 0.001561813 0.081100777 0.052961223 -6 -6 -6 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG 2L 7825909 7825914 - 2L_7825909_7825914_- 1 1 1 0 Rack1 FBtr0331237 7825627 7826760 2L - 7825718 7825940 3'utr Rack1 FlyBase G8649.2 CTGTGCTTCTCGCCCAACCGCTACTGGCTGTGCGTGGCCTACGGACCCTCGATCAAGATCTGGGATCTGGCATGCAAGAAGACCGTTGAGGAGCTGCGCCCCGAGGTCGTTTCGCCCACGTCGAAGGCCGATCAGCCCCAGTGCCTGTCCCTGGCCTGGTCCACCGACGGCCAGACTCTGTTCGCCGGCTACTCCGACAACACCATCCGCGTCTGGCAGGTGT 84 7825916 0.812652607 22 75 388 0.961904762 2.004321374 0.19047619 0.19047619 0.352380952 84 4 0 101 2L:7825718-7825940 6 Rack1 FBtr0331237 7825627 7826760 GCTGTG 6mer2-7 dme-miR-1008-3p 2L - 7825866 7825990 3'utr Rack1 FlyBase G6705.1 ATGACGGCAAGAACCTGTACACTCTGGAGCACAACGACATCATCAACGCCCTGTGCTTCTCGCCCAACCGCTACTGGCTGTGCGTGGCCTACGGACCCTCGATCAAGATCTGGGATCTGGCATGC 55 7825916 0.951693585 11 53 238 0.975903614 1.908485019 0.204819277 0.4 0.602409639 55 2 0 81 2L:7825866-7825990 6 38 960 FBgn0020618 8311.833333 901.1766667 1361.153333 0.004571795 0.042167093 0.027917501 2 2 2 0.01 dme-miR-8-3p 6mer3-8 CAGTAT 2L 7832583 7832588 + 2L_7832583_7832588_+ 1 1 1 0 mts FBtr0343416|FBtr0079525 7831805|7831805 7833576|7832668 2L + 7832545 7832641 3'utr mts FlyBase G2859.1 AGGAAGATAACGATGAAGCAGCAGCAAAAAAGTAGGAGCAGTATGTGGCAGGAGCAGCAGCGAACGCCATTGCGATGGGGGAAGCGCGGGGCGGGCC 10 7832587 0.847206809 5 9 18 1 1.041392685 0.181818182 0.1 0.181818182 10 0 0 11 2L:7832545-7832641 6 mts FBtr0343416|FBtr0079525 7831805|7831805 7833576|7832668 CAGTAT 6mer3-8 dme-miR-8-3p 2L + 7832573 7832638 3'utr mts FlyBase G2255.1 AAAGTAGGAGCAGTATGTGGCAGGAGCAGCAGCGAACGCCATTGCGATGGGGGAAGCGCGGGGCGG 7 7832612 0.886885762 3 5 17 0.7 0.84509804 0.8 0.428571429 0.6 7 3 0 7 2L:7832573-7832638 6 4.5 961 FBgn0004177 4998.333333 294.18 451.8766667 0.0009003 0.015296757 0.009958469 -4 -29 -16.5 0.01 dme-miR-980-3p 6mer2-7 GCAGCT 2L 7886004 7886009 + 2L_7886004_7886009_+ 1 1 1 0 CG34132 FBtr0110879 7885974 7886109 2L + 7885996 7886045 3'utr CG34132 FlyBase G2862.1 ATTTTGGAGCAGCTTGGGACTAACTATATCTGCCAGCTATTGATTAGTTG 10 7886009 0.899340048 5 7 78 0.7 0.84509804 0.1 0 0 10 3 0 7 2L:7885996-7886045 6 CG34132 FBtr0110879 7885974 7886109 GCAGCT 6mer2-7 dme-miR-980-3p 2L + 7885974 7886045 stop_codon CG34132 FlyBase G2258.1 AAACACACGAATCGGCTTCTGCATTTTGGAGCAGCTTGGGACTAACTATATCTGCCAGCTATTGATTAGTTG 13 7886010 0.975477194 6 11 75 0.8125 0.812913357 0.3125 0.230769231 0.375 13 2 1 13 2L:7885974-7886045 6 7 962 FBgn0083968 149.97 38.03333333 58.41 0.046676002 0.18404908 0.119842493 -5 -6 -5.5 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2L 7892660 7892665 - 2L_7892660_7892665_- 1 1 1 0 Snoo FBtr0112719|FBtr0112718|FBtr0343409 7892323|7891185|7892323 7894084|7894084|7894084 2L - 7892606 7892685 3'utr Snoo FlyBase G8662.1 ACGTTTGCTAACTAGTTCTTAAGACTTCCCTCCGGCGAAGTTCTTTCCCTATTGTGAATGGCATCGAATGGTCCCCCTTT 25 7892660 0.843977212 5 24 196 0.964285714 1.431363764 0.035714286 0.12 0.214285714 25 1 0 27 2L:7892606-7892685 6 Snoo FBtr0112719|FBtr0112718|FBtr0343409 7892323|7891185|7892323 7894084|7894084|7894084 AAGACT 6mer3-8 dme-miR-14-3p 2L - 7892608 7892679 3'utr Snoo FlyBase G6717.1 GCTAACTAGTTCTTAAGACTTCCCTCCGGCGAAGTTCTTTCCCTATTGTGAATGGCATCGAATGGTCCCCCT 23 7892660 0.979164065 7 22 157 0.935483871 0.985276743 0.096774194 0.217391304 0.419354839 23 0 2 29 2L:7892608-7892679 6 12 963 FBgn0085450 1551.763333 25.89666667 39.58333333 0.007733138 0.4633801 0.303157895 -5 -5 -5 0.01 dme-miR-970-3p 8mer-A1 TCTTATGA 2L 7893169 7893176 - 2L_7893169_7893176_- 0.630790218 0.630790218 0.630790218 0 Snoo FBtr0112719|FBtr0112718|FBtr0343409 7892323|7891185|7892323 7894084|7894084|7894084 2L - 7893124 7893278 3'utr Snoo FlyBase G8667.1 TCGTAAGCTCTGCAAGACATTTAAACCCAAAACAATATTCAAAGCGAGGCTTTCGAAACAAAATTTAGGAAAGGTTTTTCTTTGGTCACACAGGCAGCTGGTTCTTATGACAGTGGGCATCGCCCGCTGGAAACCAATGTAATTACATTAAGTTT 141 7893177 0.921014649 20 128 860 0.917159763 2.190331698 0.218934911 0.156028369 0.295857988 141 14 0 155 2L:7893124-7893278 8 Snoo FBtr0112719|FBtr0112718|FBtr0343409 7892323|7891185|7892323 7894084|7894084|7894084 TCTTATGA 8mer-A1 dme-miR-970-3p 2L - 7893138 7893347 3'utr Snoo FlyBase G6719.1 ATTCAACGACAAATTTGTGCGTGTTTTTTACCACTTACTGCTTAACCTAATTAAGTTATTATTTTTATCTCGTAAGCTCTGCAAGACATTTAAACCCAAAACAATATTCAAAGCGAGGCTTTCGAAACAAAATTTAGGAAAGGTTTTTCTTTGGTCACACAGGCAGCTGGTTCTTATGACAGTGGGCATCGCCCGCTGGAAACCAATGTA 109 7893177 0.97705526 25 103 683 0.945454545 2.193124598 0.193939394 0.376146789 0.587878788 109 9 0 156 2L:7893138-7893347 8 87 964 FBgn0085450 1551.763333 25.89666667 39.58333333 0.05606525 3.359505728 2.197894737 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2L 7893377 7893383 - 2L_7893377_7893383_- 0.671795909 0.671332294 0.671564101 0.000327815 Snoo FBtr0112719|FBtr0112718|FBtr0343409 7892323|7891185|7892323 7894084|7894084|7894084 2L - 7893365 7893419 3'utr Snoo FlyBase G8668.1 AAACTTTCAACGTTGCTTGCAGAAATTATAAATGAAACCAAAGCTTTAAAAAAAA 19 7893375 0.715705283 7 16 102 0.85 1.230448921 0.05 0.052631579 0.1 19 3 0 17 2L:7893365-7893419 7 Snoo FBtr0112719|FBtr0112718|FBtr0343409 7892323|7891185|7892323 7894084|7894084|7894084 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 7893364 7893393 3'utr Snoo FlyBase G6720.1 TATAAATGAAACCAAAGCTTTAAAAAAAAT 7 7893375 0.666087311 3 7 29 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 2L:7893364-7893393 7 11 965 FBgn0085450 1551.763333 25.89666667 39.58333333 0.00708871 0.424765092 0.277894737 -8 -8 -8 0.01 dme-miR-970-3p 6mer2-7 CTTATG 2L 7893547 7893552 - 2L_7893547_7893552_- 1 1 1 0 Snoo FBtr0112719|FBtr0112717|FBtr0112718|FBtr0343409 7892323|7893429|7891185|7892323 7894084|7894084|7894084|7894084 2L - 7893543 7893577 3'utr Snoo FlyBase G8670.1 AACTTTCTTTGGAAAACTTTTTACCCTTATGCAAA 15 7893557 0.727693936 2 15 151 1 1.342422681 0.181818182 0.333333333 0.545454545 15 0 0 22 2L:7893543-7893577 6 Snoo FBtr0112719|FBtr0112717|FBtr0112718|FBtr0343409 7892323|7893429|7891185|7892323 7894084|7894084|7894084|7894084 CTTATG 6mer2-7 dme-miR-970-3p 2L - 7893534 7893577 3'utr Snoo FlyBase G6722.1 AACTTTCTTTGGAAAACTTTTTACCCTTATGCAAAATCTATTCA 9 7893557 0.988801266 3 9 91 1 1.079181246 0 0.333333333 0.5 9 0 0 12 2L:7893534-7893577 6 11.5 966 FBgn0085450 1551.763333 25.89666667 39.58333333 0.007410924 0.444072596 0.290526316 5 5 5 0.01 dme-miR-278-3p 6mer3-8 CCCACC 2L 8038761 8038766 + 2L_8038761_8038766_+ 1 1 1 0 Cka FBtr0306001|FBtr0079537 8038200|8038200 8040826|8040826 2L + 8038735 8038791 3'utr Cka FlyBase G2896.1 TGATCTTGTCGTGGATCTTTATTTTGCCCACCAGTTGGCGGGATCAACCCAAGATCG 22 8038770 0.960144831 5 22 113 1 1.361727836 0.173913043 0.045454545 0.086956522 22 0 0 23 2L:8038735-8038791 6 Cka FBtr0079537|FBtr0306001 8038200|8038200 8040826|8040826 CCCACC 6mer3-8 dme-miR-278-3p 2L + 8038752 8038787 3'utr Cka FlyBase G2287.1 TTTATTTTGCCCACCAGTTGGCGGGATCAACCCAAG 17 8038770 0.798979106 2 16 70 0.956521739 1.342422681 0.130434783 0.352941176 0.52173913 17 1 0 22 2L:8038752-8038787 6 19 967 FBgn0044323 2376.946667 58.08333333 89.27666667 0.007993448 0.327116212 0.212821566 -9 -9 -9 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 8039206 8039211 + 2L_8039206_8039211_+ 1 1 1 0 Cka FBtr0306001|FBtr0079537 8038200|8038200 8040826|8040826 2L + 8039176 8039241 3'utr Cka FlyBase G2898.1 ATTAATTAGAGGACAGTCGAGGTGAGACTTTGATGAACGGCGGCCGGGTTTATATACGCAGGTAGC 34 8039206 0.757407323 7 34 168 1 1.579783597 0.421052632 0.088235294 0.184210526 34 0 0 38 2L:8039176-8039241 6 Cka FBtr0079537|FBtr0306001 8038200|8038200 8040826|8040826 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L + 8039176 8039229 3'utr Cka FlyBase G2289.1 ATTAATTAGAGGACAGTCGAGGTGAGACTTTGATGAACGGCGGCCGGGTTTATA 23 8039206 0.959537009 6 23 115 1 1.491361694 0.516129032 0.260869565 0.451612903 23 0 0 31 2L:8039176-8039229 6 27 968 FBgn0044323 2376.946667 58.08333333 89.27666667 0.011359111 0.464849354 0.302430646 0 0 0 0.01 dme-miR-304-5p 6mer3-8 TGAGAT 2L 8039374 8039379 + 2L_8039374_8039379_+ 0.997548022 0.999798938 0.99867348 0.001591627 Cka FBtr0306001|FBtr0079537 8038200|8038200 8040826|8040826 2L + 8039304 8039411 3'utr Cka FlyBase G2899.1 ATATAATTTCAATTGTCATTACCAAGGGGAGTACGCAATGCTTGATGGATTAACCACGACCATGTGAGGATGAGATATAAATAATAACTGCAGGCAAGCTATAAACGT 18 8039391 0.937994938 13 17 82 0.954545455 1.322219295 0.409090909 0.222222222 0.363636364 18 1 0 21 2L:8039304-8039411 6 Cka FBtr0079537|FBtr0306001 8038200|8038200 8040826|8040826 TGAGAT 6mer3-8 dme-miR-304-5p 2L + 8039316 8039417 3'utr Cka FlyBase G2290.1 TTGTCATTACCAAGGGGAGTACGCAATGCTTGATGGATTAACCACGACCATGTGAGGATGAGATATAAATAATAACTGCAGGCAAGCTATAAACGTATGCTA 15 8039373 0.955696432 8 15 70 1 1.397940009 0.08 0.533333333 0.72 15 0 0 25 2L:8039316-8039417 6 5.5 969 FBgn0044323 2376.946667 58.08333333 89.27666667 0.002313893 0.094691535 0.061606243 -17 1 -8 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 8039613 8039618 + 2L_8039613_8039618_+ 1 1 1 0 Cka FBtr0306001|FBtr0079537 8038200|8038200 8040826|8040826 2L + 8039598 8039642 3'utr Cka FlyBase G2901.1 TGAACAGATTTAGATATGTGACTTGAACGTGAACGCCGAGCAACT 16 8039621 0.96875398 5 14 79 0.947368421 1.255272505 0.263157895 0.1875 0.315789474 16 1 0 18 2L:8039598-8039642 6 Cka FBtr0079537|FBtr0306001 8038200|8038200 8040826|8040826 ATGTGA 6mer3-8 dme-miR-1003-3p 2L + 8039597 8039649 3'utr Cka FlyBase G2291.1 ATGAACAGATTTAGATATGTGACTTGAACGTGAACGCCGAGCAACTCAATATT 13 8039621 0.983132895 4 11 82 0.866666667 0.812913357 0.4 0.153846154 0.266666667 13 1 1 13 2L:8039597-8039649 6 12.5 970 FBgn0044323 2376.946667 58.08333333 89.27666667 0.005258847 0.215208034 0.140014188 -8 -8 -8 0.01 dme-miR-980-5p 6mer2-7 AAAAAC 2L 8039784 8039789 + 2L_8039784_8039789_+ 1 1 1 0 Cka FBtr0306001|FBtr0079537 8038200|8038200 8040826|8040826 2L + 8039747 8039834 3'utr Cka FlyBase G2902.2 CCAAAAACTTGATATTCGAAACCGACGAATCAGAATCAAAAACGATTGCGATCTGTGTACACCAAGCAAATCCTCTATTATTTAAATT 15 8039793 0.75537921 8 13 74 0.842105263 0.602059991 0.157894737 0.133333333 0.315789474 15 0 3 16 2L:8039747-8039834 6 Cka FBtr0079537|FBtr0306001 8038200|8038200 8040826|8040826 AAAAAC 6mer2-7 dme-miR-980-5p 2L + 8039772 8039820 3'utr Cka FlyBase G2293.1 CGAATCAGAATCAAAAACGATTGCGATCTGTGTACACCAAGCAAATCCT 6 8039792 0.971754123 5 6 35 1 0.954242509 0.333333333 0.333333333 0.555555556 6 0 0 9 2L:8039772-8039820 6 6 971 FBgn0044323 2376.946667 58.08333333 89.27666667 0.002524247 0.103299857 0.06720681 -9 -8 -8.5 0.01 dme-miR-1006-3p 6mer2-7 GAATTT 2L 8053442 8053447 + 2L_8053442_8053447_+ 1 1 1 0 CG7466 FBtr0344789|FBtr0344788 8053047|8053047 8054326|8054326 2L + 8053382 8053470 3'utr CG7466 FlyBase G2912.1 GGATACAGCAATGCATTCACGTAGTTTAAAAACAGAACAAATTTTCGGACTGATTTAGATGAATTTTCATTTGGCTAAATATGTAAACT 59 8053425 0.985234179 9 59 485 1 1.84509804 0.114285714 0.169491525 0.3 59 0 0 70 2L:8053382-8053470 6 CG7466 FBtr0344789|FBtr0344788 8053047|8053047 8054326|8054326 GAATTT 6mer2-7 dme-miR-1006-3p 2L + 8053401 8053463 3'utr CG7466 FlyBase G2299.1 CGTAGTTTAAAAACAGAACAAATTTTCGGACTGATTTAGATGAATTTTCATTTGGCTAAATAT 46 8053425 0.983632854 7 45 353 0.966666667 1.763427994 0.3 0.239130435 0.416666667 46 2 0 58 2L:8053401-8053463 6 22.5 972 FBgn0031981 647.3533333 7.71 11.75333333 0.034756908 2.918287938 1.914350539 17 17 17 0.01 dme-miR-980-5p 7mer-A1 AAAAACA 2L 8053711 8053717 + 2L_8053711_8053717_+ 0.782911824 0.768778569 0.775845197 0.009993682 CG7466 FBtr0344789|FBtr0344788 8053047|8053047 8054326|8054326 2L + 8053676 8053755 3'utr CG7466 FlyBase G2913.1 TGAAAGTGTCATAGCAATTAGACGTTGGTGATTCCAAAAACACATAAGTGCATGTCTGTCGCTCAAATAGGTTTCTTTTT 11 8053732 0.983547432 5 9 77 0.846153846 0.740362689 0.153846154 0.090909091 0.230769231 11 1 1 11 2L:8053676-8053755 7 CG7466 FBtr0344789|FBtr0344788 8053047|8053047 8054326|8054326 AAAAACA 7mer-A1 dme-miR-980-5p 2L + 8053696 8053745 3'utr CG7466 FlyBase G2300.1 GACGTTGGTGATTCCAAAAACACATAAGTGCATGTCTGTCGCTCAAATAG 5 8053728 0.981571512 4 5 24 1 0.84509804 0.142857143 0.2 0.428571429 5 0 0 7 2L:8053696-8053745 7 3.5 973 FBgn0031981 647.3533333 7.71 11.75333333 0.00540663 0.453955901 0.297787862 -21 -17 -19 0.01 dme-miR-318-3p 6mer3-8 CCCAGT 2L 8053828 8053833 + 2L_8053828_8053833_+ 0.999993002 0.999999672 0.999996337 4.74E-06 CG7466 FBtr0344789|FBtr0344788 8053047|8053047 8054326|8054326 2L + 8053804 8053849 3'utr CG7466 FlyBase G2914.1 AAAGTATTAATTATGATATTCCTTCCCAGTTGTGGTGGCTAGCATT 33 8053822 0.650022033 7 32 300 0.974358974 1.579783597 0.128205128 0.151515152 0.282051282 33 1 0 38 2L:8053804-8053849 6 CG7466 FBtr0344789|FBtr0344788 8053047|8053047 8054326|8054326 CCCAGT 6mer3-8 dme-miR-318-3p 2L + 8053809 8053848 3'utr CG7466 FlyBase G2301.1 ATTAATTATGATATTCCTTCCCAGTTGTGGTGGCTAGCAT 15 8053822 0.671704879 4 12 135 0.80952381 0.62838893 0.333333333 0.333333333 0.523809524 15 1 3 17 2L:8053809-8053848 6 23.5 974 FBgn0031981 647.3533333 7.71 11.75333333 0.036301659 3.047989624 1.999432785 6 6 6 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 8053898 8053903 + 2L_8053898_8053903_+ 1 1 1 0 CG7466 FBtr0344789|FBtr0344788 8053047|8053047 8054326|8054326 2L + 8053866 8053937 3'utr CG7466 FlyBase G2915.1 TAGCTCTCTACTGCGCACTCTTACGCACCGGTGTACCTACTATTTTAAGAACGAGAAACTATTTTTATGATC 289 8053897 0.914472987 11 284 2129 0.987692308 2.205475037 0.04 0.096885813 0.196923077 289 3 1 321 2L:8053866-8053937 6 CG7466 FBtr0344789|FBtr0344788 8053047|8053047 8054326|8054326 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 8053859 8053920 3'utr CG7466 FlyBase G2302.1 AGTTCTTTAGCTCTCTACTGCGCACTCTTACGCACCGGTGTACCTACTATTTTAAGAACGAG 191 8053897 0.916510197 7 188 1359 0.982578397 2.149219113 0.059233449 0.371727749 0.581881533 191 4 1 282 2L:8053859-8053920 6 230.5 975 FBgn0031981 647.3533333 7.71 11.75333333 0.356065209 29.89623865 19.61145774 1 1 1 0.01 dme-miR-184-3p 7mer-A1 CCGTCCA 2L 8074388 8074394 - 2L_8074388_8074394_- 0.823313066 0.823349562 0.823331314 2.58E-05 Mcr FBtr0079543 8074115 8074955 2L - 8074254 8074437 3'utr Mcr FlyBase G8829.1 GAATACATTTTTAAACGAAATGAAGTGAAAATCGTTGAAGAAACCGTCCAATTAATTTATGCAAATAATGAATCTGCATAGTTTGTAAGTTTTATACGTATATACGCCTTCATATGAACCACAATTAGTTTATAAATTCCCAACACAAATCTCACATAGCCATGTACATGAAGCTACTAAGCGA 182 8074385 0.845855747 25 164 1271 0.906862745 1.966141733 0.274509804 0.10989011 0.205882353 182 18 1 185 2L:8074254-8074437 7 Mcr FBtr0079543 8074115 8074955 CCGTCCA 7mer-A1 dme-miR-184-3p 2L - 8074239 8074417 3'utr Mcr FlyBase G6857.1 TGAAGTGAAAATCGTTGAAGAAACCGTCCAATTAATTTATGCAAATAATGAATCTGCATAGTTTGTAAGTTTTATACGTATATACGCCTTCATATGAACCACAATTAGTTTATAAATTCCCAACACAAATCTCACATAGCCATGTACATGAAGCTACTAAGCGAGAAACAAGGAAATTT 131 8074385 0.982666893 25 120 903 0.921052632 1.640978057 0.405263158 0.328244275 0.536842105 131 12 3 175 2L:8074239-8074417 7 100 976 FBgn0267488 1127.406667 21.51 32.91333333 0.088699138 4.649000465 3.038282358 -9 -9 -9 0.01 dme-miR-184-3p 8mer-A1 TCCGTCCA 2L 8074805 8074812 - 2L_8074805_8074812_- 0.631136385 0.631136385 0.631136385 0 Mcr FBtr0079543 8074115 8074955 2L - 8074780 8074841 3'utr Mcr FlyBase G8830.2 AGTTTTTTTGTTTGCCAACGAAATTGCATTCCGTCCAAAAATGCTGGTCAACATTTTGGTTT 5777 8074813 0.742386623 15 5720 31649 0.991896976 2.689879423 0.277239184 0.157348105 0.295615685 5777 43 13 6855 2L:8074780-8074841 8 Mcr FBtr0079543 8074115 8074955 TCCGTCCA 8mer-A1 dme-miR-184-3p 2L - 8074764 8074841 3'utr Mcr FlyBase G6862.1 AGTTTTTTTGTTTGCCAACGAAATTGCATTCCGTCCAAAAATGCTGGTCAACATTTTGGTTTTATTTTTAGTTCTTTT 3688 8074813 0.924325697 17 3625 19427 0.983850481 2.558068254 0.288332426 0.369577007 0.578116494 3688 75 14 5422 2L:8074764-8074841 8 4719 977 FBgn0267488 1127.406667 21.51 32.91333333 4.185712343 219.3863319 143.3765445 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2L 8107990 8107995 + 2L_8107990_8107995_+ 1 1 1 0 Bsg FBtr0079570|FBtr0079567|FBtr0079571|FBtr0079568|FBtr0079566|FBtr0079572|FBtr0079569|FBtr0079573 8107883|8107883|8107883|8107883|8107883|8107883|8107883|8107883 8109458|8109458|8116531|8116531|8109458|8109458|8109458|8109458 2L + 8107959 8108009 5'utr Bsg FlyBase G2932.1 AAACAAAATACCAACAACATAAACTGTCAACACCAAATAATATTAAAAATC 9 8107978 0.9246572 5 9 28 1 1.041392685 0 0.222222222 0.363636364 9 0 0 11 2L:8107959-8108009 6 Bsg FBtr0079569|FBtr0079573|FBtr0079566|FBtr0079572|FBtr0079571|FBtr0079568|FBtr0079570|FBtr0079567 8107883|8107883|8107883|8107883|8107883|8107883|8107883|8107883 8109458|8109458|8109458|8109458|8116531|8116531|8109458|8109458 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L + 8107954 8107994 5'utr Bsg FlyBase G2319.1 ACAACAAACAAAATACCAACAACATAAACTGTCAACACCAA 5 8107978 0.940691254 2 2 8 0.666666667 0.602059991 0.333333333 0.2 0.333333333 5 2 0 4 2L:8107954-8107994 5 6 978 FBgn0261822 8004.233333 323.89 495.0033333 0.000749603 0.018524808 0.01212113 12 12 12 0.01 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2L 8108095 8108100 + 2L_8108095_8108100_+ 1 1 1 0 Bsg FBtr0079570|FBtr0079567|FBtr0079571|FBtr0079568|FBtr0079566|FBtr0079572|FBtr0079569|FBtr0079573 8107883|8107883|8107883|8107883|8107883|8107883|8107883|8107883 8109458|8109458|8116531|8116531|8109458|8109458|8109458|8109458 2L + 8108041 8108144 5'utr Bsg FlyBase G2933.1 GCAACAGAAGAGGAAAAAGTTGAAATTTTAGTTTTATACTGCAAATTAAAGACGTTGAAGCTGCAGGCGAATGCAGACCAGACACCAACATAACCATACGAAAC 34 8108087 0.97015453 10 34 195 1 1.612783857 0.365853659 0.176470588 0.317073171 34 0 0 41 2L:8108041-8108144 6 Bsg FBtr0079569|FBtr0079573|FBtr0079566|FBtr0079572|FBtr0079571|FBtr0079568|FBtr0079570|FBtr0079567 8107883|8107883|8107883|8107883|8107883|8107883|8107883|8107883 8109458|8109458|8109458|8109458|8116531|8116531|8109458|8109458 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2L + 8108046 8108130 5'utr Bsg FlyBase G2320.1 AGAAGAGGAAAAAGTTGAAATTTTAGTTTTATACTGCAAATTAAAGACGTTGAAGCTGCAGGCGAATGCAGACCAGACACCAACA 26 8108087 0.978337097 12 24 161 0.9375 1.653212514 0.270833333 0.5 0.729166667 26 3 0 45 2L:8108046-8108130 6 20 979 FBgn0261822 8004.233333 323.89 495.0033333 0.002498678 0.061749359 0.040403768 8 8 8 0.01 dme-miR-305-3p 6mer2-7 TGTGCC 2L 8108394 8108399 + 2L_8108394_8108399_+ 1 1 1 0 Bsg FBtr0079570|FBtr0079567|FBtr0079571|FBtr0079568|FBtr0079566|FBtr0079572|FBtr0079569|FBtr0079573 8107883|8107883|8107883|8107883|8107883|8107883|8107883|8107883 8109458|8109458|8116531|8116531|8109458|8109458|8109458|8109458 2L + 8108370 8108521 5'utr Bsg FlyBase G2934.3 ATTTTGTATTATAATGAAGTCCACTGTGCCTGGAGCGTCGCAAAGAAATTAATAAAATAACGAGACCCAGAGTAGTGAAATGGAGAGTGATCCACTAATCGTTGTGGTTTCTACTTTTTTTTCGATGTGTGCTAAGCGAAAGCAAATATATT 507 8108394 0.844704866 16 499 2393 0.988448845 2.476396827 0.268976898 0.169625247 0.305280528 507 6 1 599 2L:8108370-8108521 6 Bsg FBtr0079569|FBtr0079573|FBtr0079566|FBtr0079572|FBtr0079571|FBtr0079568|FBtr0079570|FBtr0079567 8107883|8107883|8107883|8107883|8107883|8107883|8107883|8107883 8109458|8109458|8109458|8109458|8116531|8116531|8109458|8109458 TGTGCC 6mer2-7 dme-miR-305-3p 2L + 8108373 8108417 5'utr Bsg FlyBase G2321.2 TTGTATTATAATGAAGTCCACTGTGCCTGGAGCGTCGCAAAGAAA 301 8108394 0.779209661 6 296 1285 0.98553719 2.678518379 0.274793388 0.438538206 0.650826446 301 7 0 477 2L:8108373-8108417 6 374.5 980 FBgn0261822 8004.233333 323.89 495.0033333 0.046787741 1.156256754 0.756560562 0 0 0 0.01 dme-miR-8-3p 6mer2-7 AGTATT 2L 8109163 8109168 + 2L_8109163_8109168_+ 1 1 1 0 Bsg FBtr0079570|FBtr0079567|FBtr0079571|FBtr0079568|FBtr0079566|FBtr0079572|FBtr0079569|FBtr0079573 8107883|8107883|8107883|8107883|8107883|8107883|8107883|8107883 8109458|8109458|8116531|8116531|8109458|8109458|8109458|8109458 2L + 8109036 8109282 5'utr Bsg FlyBase G2938.1 TTATATAAGCTTATTAATTTCTTGGCAGTGAATAAAACATACACACGAAAACACAGAAGTCGTAGCTCAACACGTTTGCATTGATTTGGAATTATAATTAGAATTATTTGTATATTGTACACAAAAGAGTATTTTCCCCGACACCCAATGCCCCTCAACCCTGCCCCTCTAGTTGCGCACTTTCTGTTTTTTCTTGTCGCCTCTGTTGATTTTGCTGTGTATAAACTCGATAACTTTATCATTTTTA 237 8109169 0.804429196 35 230 1549 0.971119134 2.128722284 0.101083032 0.143459916 0.267148014 237 7 1 269 2L:8109036-8109282 6 Bsg FBtr0079569|FBtr0079573|FBtr0079566|FBtr0079572|FBtr0079571|FBtr0079568|FBtr0079570|FBtr0079567 8107883|8107883|8107883|8107883|8107883|8107883|8107883|8107883 8109458|8109458|8109458|8109458|8116531|8116531|8109458|8109458 AGTATT 6mer2-7 dme-miR-8-3p 2L + 8109038 8109228 5'utr Bsg FlyBase G2326.1 ATATAAGCTTATTAATTTCTTGGCAGTGAATAAAACATACACACGAAAACACAGAAGTCGTAGCTCAACACGTTTGCATTGATTTGGAATTATAATTAGAATTATTTGTATATTGTACACAAAAGAGTATTTTCCCCGACACCCAATGCCCCTCAACCCTGCCCCTCTAGTTGCGCACTTTCTGTTTTTTC 130 8109169 0.903368536 19 121 834 0.942196532 2.212187604 0.092485549 0.261538462 0.445086705 130 10 0 163 2L:8109038-8109228 6 72 981 FBgn0261822 8004.233333 323.89 495.0033333 0.00899524 0.222297694 0.145453566 -6 -6 -6 0.01 dme-miR-304-5p 7mer-m8 TGAGATT 2L 8109358 8109364 + 2L_8109358_8109364_+ 0.620203442 0.620203442 0.620203442 0 Bsg FBtr0079570|FBtr0079567|FBtr0079571|FBtr0079568|FBtr0079566|FBtr0079572|FBtr0079569|FBtr0079573 8107883|8107883|8107883|8107883|8107883|8107883|8107883|8107883 8109458|8109458|8116531|8116531|8109458|8109458|8109458|8109458 2L + 8109288 8109413 stop_codon Bsg FlyBase G2938.2 TGTATCTAGTATCTAAACACTTGTGCTATTCTCTACCGATTACAACTATCCATTATGATTTTGTGAGTTTTGAGATTGATTTCTACCGAAATATAAAACAAACAACAACAACAAAAAATACAATTG 182 8109358 0.985359599 23 171 1745 0.952380952 1.823908741 0.076190476 0.142857143 0.257142857 182 8 2 200 2L:8109288-8109413 7 Bsg FBtr0079569|FBtr0079573|FBtr0079566|FBtr0079572|FBtr0079571|FBtr0079568|FBtr0079570|FBtr0079567 8107883|8107883|8107883|8107883|8107883|8107883|8107883|8107883 8109458|8109458|8109458|8109458|8116531|8116531|8109458|8109458 TGAGATT 7mer-m8 dme-miR-304-5p 2L + 8109283 8109386 stop_codon Bsg FlyBase G2327.1 TTCTTTGTATCTAGTATCTAAACACTTGTGCTATTCTCTACCGATTACAACTATCCATTATGATTTTGTGAGTTTTGAGATTGATTTCTACCGAAATATAAAAC 113 8109358 0.871448912 26 110 1107 0.973856209 1.872156273 0.078431373 0.283185841 0.470588235 113 3 1 149 2L:8109283-8109386 7 83.5 982 FBgn0261822 8004.233333 323.89 495.0033333 0.01043198 0.257803575 0.168685733 0 0 0 0.01 dme-miR-252-5p 7mer-m8 GTACTTA 2L 8117339 8117345 - 2L_8117339_8117345_- 0.588299917 0.588299917 0.588299917 0 mon2 FBtr0339674|FBtr0301229 8117290|8116963 8117519|8117519 2L - 8117311 8117357 3'utr mon2 FlyBase G8843.1 CTAAGCATCTATGTACTTACATACATACCTAAACATATATATATATA 8 8117346 0.979569678 3 8 61 1 0.954242509 0 0.125 0.222222222 8 0 0 9 2L:8117311-8117357 7 mon2 FBtr0339674|FBtr0301229 8117290|8116963 8117519|8117519 GTACTTA 7mer-m8 dme-miR-252-5p 2L - 8117333 8117396 3'utr mon2 FlyBase G6869.1 GAATGTTAATCTTAGCCCTCCCTCGCATAGATGTAACGACTAAGCATCTATGTACTTACATACA 9 8117346 0.733078333 5 7 57 0.941176471 1.204119983 0.705882353 0.444444444 0.705882353 9 1 0 16 2L:8117333-8117396 7 6.5 983 FBgn0031985 610.5 12.61 19.26333333 0.010647011 0.515463918 0.337428621 1 1 1 0.01 dme-miR-1008-3p 7mer-m8 AGCTGTG 2L 8117463 8117469 - 2L_8117463_8117469_- 0.671795832 0.671795832 0.671795832 0 mon2 FBtr0339674|FBtr0301229 8117290|8116963 8117519|8117519 2L - 8117432 8117491 3'utr mon2 FlyBase G8844.1 AGTCCACATCCAGACTGGTGACAGCTGTGCGATGTTTTTCTTAGTTGTTTAAGCGCGAAC 6 8117459 0.929877148 4 6 37 1 0.954242509 0.333333333 0.5 0.666666667 6 0 0 9 2L:8117432-8117491 7 mon2 FBtr0339674|FBtr0301229 8117290|8116963 8117519|8117519 AGCTGTG 7mer-m8 dme-miR-1008-3p 2L - 8117455 8117556 stop_codon mon2 FlyBase G6870.2 AAACGACAATGTAATACAATCGAATGGACAAGAGTGAAAGTATGCCTAGACACAGACAGAGACCAAGTCCACATCCAGACTGGTGACAGCTGTGCGATGTTT 17 8117473 0.931438492 8 13 64 0.84375 1.130333768 0.4375 0.588235294 0.78125 17 4 1 27 2L:8117455-8117556 7 4 984 FBgn0031985 610.5 12.61 19.26333333 0.006552007 0.317208565 0.207648382 -10 4 -3 0.01 dme-miR-980-3p 8mer-A1 GGCAGCTA 2L 8133756 8133763 + 2L_8133756_8133763_+ 0.668734347 0.668734347 0.668734347 0 CG8668 FBtr0079576|FBtr0339671 8133642|8133642 8133989|8133989 2L + 8133461 8133862 stop_codon CG8668 FlyBase G2955.1 ACCACGGGCATAGTAGCCAAGAGCCTTAATGTTAAGCGGGTGCAGGCGAACGAGTTCGTTAACCGACGCATCTCATTTAACCCGTGCAACATCCGCAACGCAATCAGCGTGCACATGATCAAGTCGAACGAACAATTCGATTTGTGGAAAAAGCTGCTGGATCAGACCACCAAGTGTAAATAGTATTTTAAGTTTAGGGTGTAGTTTTTCCGGTATGAAGAACACAGTGTGGTCTTTCGAGAAAAAAGGGGCGAACATATATGTAATATGGTAGGAGTAGAGAATGATTAGCAAAGGCAGCTATATAGGATTATAAAATTAGACTAGTCTCTAAGTCCTAGAAATATCACAAATTCTGTTGTCGATCTCTGCATCCGCCTATATGCATGCGATCCAACAACG 527 8133748 0.899540704 58 483 3354 0.921221865 2.156094631 0.118971061 0.155597723 0.284565916 527 46 3 573 2L:8133461-8133862 8 CG8668 FBtr0079576|FBtr0339671 8133642|8133642 8133989|8133989 GGCAGCTA 8mer-A1 dme-miR-980-3p 2L + 8133704 8133880 3'utr CG8668 FlyBase G2342.2 AAAAGGGGCGAACATATATGTAATATGGTAGGAGTAGAGAATGATTAGCAAAGGCAGCTATATAGGATTATAAAATTAGACTAGTCTCTAAGTCCTAGAAATATCACAAATTCTGTTGTCGATCTCTGCATCCGCCTATATGCATGCGATCCAACAACGATTCGAGTACATTTTAAA 361 8133748 0.977729168 36 315 2289 0.897482014 1.795010559 0.120503597 0.376731302 0.595323741 361 50 7 499 2L:8133704-8133880 8 287.5 985 FBgn0031988 2594.666667 107.8333333 165.63 0.110804214 2.666151468 1.735796655 8 8 8 0.01 dme-miR-184-5p 6mer3-8 TGATAA 2L 8133925 8133930 + 2L_8133925_8133930_+ 1 1 1 0 CG8668 FBtr0079576|FBtr0339671 8133642|8133642 8133989|8133989 2L + 8133923 8133971 3'utr CG8668 FlyBase G2956.1 AATGATAATTACTGAGCGATAACTGTGGTTATATATTAACACTAAATAC 230 8133942 0.868065847 11 223 1835 0.966165414 2.108903128 0 0.134782609 0.251879699 230 8 1 257 2L:8133923-8133971 6 CG8668 FBtr0079576|FBtr0339671 8133642|8133642 8133989|8133989 TGATAA 6mer3-8 dme-miR-184-5p 2L + 8133919 8133971 3'utr CG8668 FlyBase G2343.1 TTTAAATGATAATTACTGAGCGATAACTGTGGTTATATATTAACACTAAATAC 114 8133952 0.759007468 13 107 855 0.940540541 2.240549248 0.016216216 0.412280702 0.637837838 114 11 0 174 2L:8133919-8133971 6 11.5 986 FBgn0031988 2594.666667 107.8333333 165.63 0.004432169 0.106646059 0.069431866 -17 -27 -22 0.01 dme-miR-79-3p 7mer-A1 AGCTTTA 2L 8134398 8134404 - 2L_8134398_8134404_- 0.398524706 0.542441321 0.470483014 0.101764404 CG8552 FBtr0339673|FBtr0302595|FBtr0344863|FBtr0079641 8134245|8134245|8134245|8134245 8134622|8134622|8134622|8134622 2L - 8134308 8134424 3'utr CG8552 FlyBase G8873.1 AAAACCGTAGCAAGTTCTTGAGCTTTACAAAATTACCTATGTATTGATCGGATTGGCACCCATGAGACCTATTTGTTATTTTTGTAATATCGCCTGTGTAACAACTAACTTTGTAAC 37 8134406 0.971145721 11 36 275 0.979166667 1.672097858 0.104166667 0.243243243 0.416666667 37 1 0 47 2L:8134308-8134424 7 CG8552 FBtr0344863|FBtr0079641|FBtr0339673|FBtr0302595 8134245|8134245|8134245|8134245 8134622|8134622|8134622|8134622 AGCTTTA 7mer-A1 dme-miR-79-3p 2L - 8134305 8134424 3'utr CG8552 FlyBase G6888.1 AAAACCGTAGCAAGTTCTTGAGCTTTACAAAATTACCTATGTATTGATCGGATTGGCACCCATGAGACCTATTTGTTATTTTTGTAATATCGCCTGTGTAACAACTAACTTTGTAACATT 13 8134406 0.982793012 8 12 96 1 1.322219295 0.142857143 0.538461538 0.714285714 13 0 0 21 2L:8134305-8134424 7 13 987 FBgn0031990 1987.903333 36.46 55.94333333 0.006539553 0.356555129 0.232378002 2 2 2 0.01 dme-miR-1006-3p 6mer2-7 GAATTT 2L 818173 818178 - 2L_818173_818178_- 1 1 1 0 CG3876 FBtr0078039 818077 818506 2L - 818151 818218 3'utr CG3876 FlyBase G6658.1 TAGGAACAAGGCTTCAATAAGGTTTTATTTTATACGTACTGAATTTGCTTTTATTGGCTTCTAATGTT 10 818174 0.99356708 3 7 96 0.909090909 1 0.181818182 0.1 0.181818182 10 1 0 10 2L:818151-818218 6 CG3876 FBtr0078039 818077 818506 GAATTT 6mer2-7 dme-miR-1006-3p 2L - 818144 818240 3'utr CG3876 FlyBase G5207.1 ATTATTTATACACATACTCATTTAGGAACAAGGCTTCAATAAGGTTTTATTTTATACGTACTGAATTTGCTTTTATTGGCTTCTAATGTTCTAATTC 15 818174 0.987685901 10 14 154 0.958333333 1.06069784 0.041666667 0.533333333 0.708333333 15 0 1 23 2L:818144-818240 6 8 988 FBgn0031284 55.33333333 4.87 7.336666667 0.144578313 1.642710472 1.090413448 -4 -4 -4 0.01 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 818310 818317 - 2L_818310_818317_- 0.625364009 0.625364009 0.625364009 0 CG3876 FBtr0078039 818077 818506 2L - 818272 818375 3'utr CG3876 FlyBase G6659.1 GAGGGATTCCGAGAGGAGACGATTCAGTATGACAGGATCTGATGCATACACACGCTTTTAGCTTTAGGCTCTAACACGATTTTACACCTAAAGGATCTAGTTAA 243 818318 0.985040237 14 236 1911 0.966666667 2.115610512 0.22962963 0.090534979 0.181481481 243 8 1 261 2L:818272-818375 8 CG3876 FBtr0078039 818077 818506 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 818270 818376 3'utr CG3876 FlyBase G5208.1 CGAGGGATTCCGAGAGGAGACGATTCAGTATGACAGGATCTGATGCATACACACGCTTTTAGCTTTAGGCTCTAACACGATTTTACACCTAAAGGATCTAGTTAAAT 183 818318 0.894220167 17 178 1423 0.977198697 2.176091259 0.159609121 0.459016393 0.67752443 183 6 1 300 2L:818270-818376 8 170.5 989 FBgn0031284 55.33333333 4.87 7.336666667 3.081325301 35.01026694 23.23943662 1 1 1 0.01 dme-miR-34-5p 6mer2-7 ACTGCC 2L 8189310 8189315 + 2L_8189310_8189315_+ 1 1 1 0 Piezo FBtr0335176|FBtr0335178|FBtr0335182|FBtr0335183|FBtr0335175|FBtr0335177|FBtr0335180|FBtr0335179|FBtr0335181 8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128 8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137 2L + 8189284 8189352 3'utr Piezo FlyBase G2996.1 CAGTCGTTCGATTTTTTGTCAAAAGTACTGCCCATGTGTAAAACTGTGTATTTAGTAACTAAGCGAAAA 102 8189335 0.741029583 12 97 784 0.967213115 1.770852012 0.43442623 0.176470588 0.31147541 102 3 1 118 2L:8189284-8189352 6 Piezo FBtr0335181|FBtr0335179|FBtr0335180|FBtr0335177|FBtr0335175|FBtr0335183|FBtr0335182|FBtr0335178|FBtr0335176 8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128 8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137 ACTGCC 6mer2-7 dme-miR-34-5p 2L + 8189283 8189351 3'utr Piezo FlyBase G2367.1 ACAGTCGTTCGATTTTTTGTCAAAAGTACTGCCCATGTGTAAAACTGTGTATTTAGTAACTAAGCGAAA 62 8189335 0.985673133 9 57 498 0.929292929 1.963787827 0.626262626 0.403225806 0.626262626 62 7 0 92 2L:8189283-8189351 6 25 990 FBgn0264953 3209.976667 41.34 63.05333333 0.007788219 0.604741171 0.396489744 -25 -25 -25 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 8189487 8189492 + 2L_8189487_8189492_+ 1 1 1 0 Piezo FBtr0335176|FBtr0335178|FBtr0335182|FBtr0335183|FBtr0335175|FBtr0335177|FBtr0335180|FBtr0335179|FBtr0335181 8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128 8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137 2L + 8189483 8189518 3'utr Piezo FlyBase G2997.1 ATAATGATGAAAACTCATATTCAGGGAATTTAGCAT 8 8189502 0.727504568 2 5 50 0.75 0.954242509 0.083333333 0.5 0.666666667 8 3 0 9 2L:8189483-8189518 6 Piezo FBtr0335181|FBtr0335179|FBtr0335180|FBtr0335177|FBtr0335175|FBtr0335183|FBtr0335182|FBtr0335178|FBtr0335176 8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128 8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L + 8189479 8189516 3'utr Piezo FlyBase G2368.1 AATAATAATGATGAAAACTCATATTCAGGGAATTTAGC 7 8189489 0.825528972 3 6 43 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 2L:8189479-8189516 6 6 991 FBgn0264953 3209.976667 41.34 63.05333333 0.001869172 0.145137881 0.095157539 -15 -2 -8.5 0.01 dme-miR-305-3p 6mer2-7 TGTGCC 2L 8189682 8189687 + 2L_8189682_8189687_+ 1 1 1 0 Piezo FBtr0335176|FBtr0335178|FBtr0335182|FBtr0335183|FBtr0335175|FBtr0335177|FBtr0335180|FBtr0335179|FBtr0335181 8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128 8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137 2L + 8189663 8189710 3'utr Piezo FlyBase G2999.1 TCTATGCTGTTTGCCTAATTGTGCCCTTTACAACTGATTAAATATATT 11 8189689 0.857526164 6 11 100 1 1.176091259 0 0.363636364 0.533333333 11 0 0 15 2L:8189663-8189710 6 Piezo FBtr0335181|FBtr0335179|FBtr0335180|FBtr0335177|FBtr0335175|FBtr0335183|FBtr0335182|FBtr0335178|FBtr0335176 8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128 8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137 TGTGCC 6mer2-7 dme-miR-305-3p 2L + 8189681 8189702 3'utr Piezo FlyBase G2369.1 TTGTGCCCTTTACAACTGATTA 5 8189690 0.660049579 3 5 32 1 1 0 0.6 0.8 5 0 0 10 2L:8189681-8189702 6 8 992 FBgn0264953 3209.976667 41.34 63.05333333 0.00249223 0.193517175 0.126876718 -7 -8 -7.5 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 2L 8189774 8189779 + 2L_8189774_8189779_+ 1 1 1 0 Piezo FBtr0335176|FBtr0335178|FBtr0335182|FBtr0335183|FBtr0335175|FBtr0335177|FBtr0335180|FBtr0335179|FBtr0335181 8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128 8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137 2L + 8189749 8189814 3'utr Piezo FlyBase G3000.1 CGATACATATTGCATATATAGAGCGTTGACTTTAGTTTTAGGCATATCACTTGACATATTTTTGTA 95 8189774 0.989815296 11 91 899 0.981818182 1.73239376 0.054545455 0.136842105 0.254545455 95 1 1 108 2L:8189749-8189814 6 Piezo FBtr0335181|FBtr0335179|FBtr0335180|FBtr0335177|FBtr0335175|FBtr0335183|FBtr0335182|FBtr0335178|FBtr0335176 8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128 8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137 TTGACT 6mer3-8 dme-miR-1012-3p 2L + 8189724 8189796 3'utr Piezo FlyBase G2370.1 ACTGTTTACTACTATATAACTAAATCGATACATATTGCATATATAGAGCGTTGACTTTAGTTTTAGGCATATC 52 8189774 0.789974715 11 50 462 0.975 1.892094603 0.025 0.384615385 0.6 52 2 0 78 2L:8189724-8189796 6 68.5 993 FBgn0264953 3209.976667 41.34 63.05333333 0.021339719 1.656990808 1.086381899 0 0 0 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 8192604 8192609 - 2L_8192604_8192609_- 1 1 1 0 CG8475 FBtr0079639 8190952 8194921 2L - 8192578 8192638 5'utr CG8475 FlyBase G8910.1 ATCGAGCATCTTGACTTTATGAACCAAAGTGATCTGACCGACAACGAGAATGCGTTCTCGC 37 8192605 0.786975908 7 36 140 0.977777778 1.643452676 0.111111111 0.189189189 0.333333333 37 1 0 44 2L:8192578-8192638 6 CG8475 FBtr0079639 8190952 8194921 TGATCT 6mer3-8 dme-bantam-3p 2L - 8192590 8192627 5'utr CG8475 FlyBase G6907.1 TGACTTTATGAACCAAAGTGATCTGACCGACAACGAGA 25 8192606 0.922985833 4 23 82 1 1.62324929 0.023809524 0.4 0.642857143 25 0 0 42 2L:8192590-8192627 6 28 994 FBgn0031995 561.1466667 16.95666667 25.92 0.049897828 1.651267938 1.080246914 -4 -3 -3.5 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2L 8200319 8200325 + 2L_8200319_8200325_+ 0.521223855 0.521223855 0.521223855 0 PGAP5 FBtr0079587 8200280 8200652 2L + 8200304 8200394 3'utr PGAP5 FlyBase G3007.1 AGGCATATCCTCTTTTGTGATTTACGCCTGATTGGGGCTTAGTTTAGACTAGATACGCCAGATTCCAGACTCAGATCCCAGATCCAGATCC 77 8200325 0.77869604 14 72 714 0.934782609 1.633468456 0.336956522 0.142857143 0.282608696 77 5 1 86 2L:8200304-8200394 7 PGAP5 FBtr0079587 8200280 8200652 TGTGATT 7mer-m1 dme-miR-308-3p 2L + 8200303 8200358 3'utr PGAP5 FlyBase G2375.1 AAGGCATATCCTCTTTTGTGATTTACGCCTGATTGGGGCTTAGTTTAGACTAGATA 53 8200325 0.712634575 12 50 479 0.942028986 1.335792102 0.434782609 0.264150943 0.434782609 53 2 2 65 2L:8200303-8200358 7 52.5 995 FBgn0031997 251.1233333 19.52 29.58 0.209060621 2.68954918 1.77484787 -6 -6 -6 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 8200491 8200498 - 2L_8200491_8200498_- 0.650171355 0.650171355 0.650171355 0 SLC5A11 FBtr0079637|FBtr0079637|FBtr0079637 8200463|8200463|8200463 8200884|8200884|8200884 2L - 8200474 8200605 3'utr SLC5A11 FlyBase G8915.1 CTTTACTTTCCAGCCTTTGTTCAAGCATTATTTTTTTGGCATTTTCGATTTGTAGTCAGCAGACTGTGTCTCATTATGTATTCCGTTTGACTTTACAAGCATAATGTCTGTGATAAATTCAATAAATAGATC 96 8200500 0.985436533 17 87 760 0.923728814 1.736396502 0.110169492 0.1875 0.338983051 96 8 1 109 2L:8200474-8200605 8 SLC5A11 FBtr0079637|FBtr0079637|FBtr0079637 8200463|8200463|8200463 8200884|8200884|8200884 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 8200482 8200518 3'utr SLC5A11 FlyBase G6910.1 TGACTTTACAAGCATAATGTCTGTGATAAATTCAATA 45 8200500 0.711099359 8 39 342 0.884057971 1.785329835 0.057971014 0.333333333 0.565217391 45 8 0 61 2L:8200482-8200518 8 60 996 FBgn0031998 248.32 11.31333333 17.32 0.241623711 5.303476724 3.464203233 2 2 2 0.01 dme-miR-1012-3p 6mer2-7 TGACTA 2L 8200548 8200553 + 2L_8200548_8200553_+ 1 1 1 0 PGAP5 FBtr0335190|FBtr0079588|FBtr0079587 8200277|8200354|8200280 8200652|8200652|8200652 2L + 8200505 8200577 3'utr PGAP5 FlyBase G3009.1 TGCTTGTAAAGTCAAACGGAATACATAATGAGACACAGTCTGCTGACTACAAATCGAAAATGCCAAAAAAATA 16 8200533 0.992110434 5 15 58 1 1.322219295 0 0.125 0.333333333 16 0 0 21 2L:8200505-8200577 6 PGAP5 FBtr0079587|FBtr0079588|FBtr0335190 8200280|8200354|8200277 8200652|8200652|8200652 TGACTA 6mer2-7 dme-miR-1012-3p 2L + 8200491 8200557 3'utr PGAP5 FlyBase G2376.1 TATCACAGACATTATGCTTGTAAAGTCAAACGGAATACATAATGAGACACAGTCTGCTGACTACAAA 8 8200533 0.955602823 3 7 36 1 1.079181246 0.083333333 0.25 0.5 8 0 0 12 2L:8200491-8200557 6 8 997 FBgn0031997 251.1233333 19.52 29.58 0.031856857 0.409836066 0.270453009 15 15 15 0.01 dme-miR-305-5p 6mer3-8 AGTACA 2L 8200712 8200717 - 2L_8200712_8200717_- 1 1 1 0 SLC5A11 FBtr0079637 8200463 8200884 2L - 8200671 8200889 stop_codon SLC5A11 FlyBase G8916.1 CCTAAAATAGACGAACCAGAACTTCCTGTGCCAAACTAATGGAATTGATGGCATTGAATTCCACACCCTGTTTTGTTAGCATAGTTTGTAGTTGTAGTTGCTTTGTGGTAGTTACCTTATAGATAGCCTAGTCTAGTACAATGTGATCCAGATATTGGAAGACATAAACCGAAGTACAGGAACCTATGAATCTGCATCTCAGAATACAGAGTGCACAAT 57 8200697 0.872434197 26 53 370 0.941176471 1.806179974 0.117647059 0.140350877 0.279411765 57 4 0 64 2L:8200671-8200889 6 SLC5A11 FBtr0079637 8200463 8200884 AGTACA 6mer3-8 dme-miR-305-5p 2L - 8200663 8200717 3'utr SLC5A11 FlyBase G6911.1 AGTACAGGAACCTATGAATCTGCATCTCAGAATACAGAGTGCACAATCATTAACG 8 8200698 0.972385235 5 8 46 1 1.146128036 0.142857143 0.5 0.714285714 8 0 0 14 2L:8200663-8200717 6 9 998 FBgn0031998 248.32 11.31333333 17.32 0.036243557 0.795521509 0.519630485 -20 -19 -19.5 0.01 dme-miR-184-5p 6mer3-8 TGATAA 2L 8209669 8209674 - 2L_8209669_8209674_- 1 1 1 0 Su(var)205 FBtr0079636|FBtr0079635 8209624|8209624 8209834|8209834 2L - 8209625 8209707 3'utr Su(var)205 FlyBase G8917.1 TCCATAAATGTCCAGAGTCAGTGTCTGTATTTATGATAACCATTTTCAATAAATAAAAAAAACCTTTATTCTGCTGGAGCCTA 18 8209664 0.676731094 12 18 127 1 1.431363764 0.333333333 0.333333333 0.555555556 18 0 0 27 2L:8209625-8209707 6 Su(var)205 FBtr0079635|FBtr0079636 8209624|8209624 8209834|8209834 TGATAA 6mer3-8 dme-miR-184-5p 2L - 8209625 8209688 3'utr Su(var)205 FlyBase G6914.1 AGTGTCTGTATTTATGATAACCATTTTCAATAAATAAAAAAAACCTTTATTCTGCTGGAGCCTA 10 8209676 0.98210971 6 10 75 1 1.176091259 0 0.4 0.6 10 0 0 15 2L:8209625-8209688 6 7.5 999 FBgn0003607 3176.68 396.8566667 605.5133333 0.002360955 0.018898511 0.012386185 -10 2 -4 0.01 dme-miR-14-3p 6mer2-7 AGACTG 2L 820991 820996 + 2L_820991_820996_+ 1 1 1 0 Clp FBtr0078011 820968 821209 2L + 820964 821017 stop_codon Clp FlyBase G895.1 AAGTAGGACGCTCTGCTCTGTATGATTAGACTGTAAGAGTGCAGAAATAAAGGT 13 820989 0.980649326 4 13 100 1 1.113943352 0.538461538 0 0 13 0 0 13 2L:820964-821017 6 Clp FBtr0078011 820968 821209 AGACTG 6mer2-7 dme-miR-14-3p 2L + 820964 821008 stop_codon Clp FlyBase G714.1 AAGTAGGACGCTCTGCTCTGTATGATTAGACTGTAAGAGTGCAGA 9 820989 0.976518707 3 9 64 1 1.113943352 0.384615385 0.444444444 0.615384615 9 0 0 13 2L:820964-821008 6 11 1000 FBgn0015621 194.6666667 19.23666667 29.43666667 0.056506849 0.57182464 0.373683615 2 2 2 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 2L 821129 821135 + 2L_821129_821135_+ 0.620204266 0.620204266 0.620204266 0 Clp FBtr0078011 820968 821209 2L + 821046 821190 3'utr Clp FlyBase G896.1 AGTCCAGAGGTCGTAGGTTCCCAACTTCCGCAGGCGAACGTTTCAATCATTCTGTGTTTAAAGTGTATGTTAAGAAACTCATTTGCATTTTTGAAAAAAGTCCCTAGAACTGCCAGTAGAACGTATTGTGTTATCAGCGAAATAA 54 821128 0.839590949 13 49 388 0.915254237 1.255272505 0.338983051 0.092592593 0.169491525 54 3 2 54 2L:821046-821190 7 Clp FBtr0078011 820968 821209 TGCATTT 7mer-m8 dme-miR-277-3p 2L + 821049 821185 3'utr Clp FlyBase G715.1 CCAGAGGTCGTAGGTTCCCAACTTCCGCAGGCGAACGTTTCAATCATTCTGTGTTTAAAGTGTATGTTAAGAAACTCATTTGCATTTTTGAAAAAAGTCCCTAGAACTGCCAGTAGAACGTATTGTGTTATCAGCGA 44 821128 0.987021857 8 41 359 0.920634921 1.462397998 0.349206349 0.318181818 0.523809524 44 4 1 58 2L:821049-821185 7 21 1001 FBgn0015621 194.6666667 19.23666667 29.43666667 0.107876712 1.091665223 0.713395991 1 1 1 0.01 dme-miR-190-5p 6mer3-8 ACATAT 2L 8212070 8212075 - 2L_8212070_8212075_- 1 1 1 0 CG8372 FBtr0079634|FBtr0079633 8212037|8212037 8212118|8212118 2L - 8212043 8212099 3'utr CG8372 FlyBase G8924.1 TGCTATCAATGTACAAATCTATGTACATATGACGTCCAATAAAGGATTCATTCATTT 18 8212070 0.805226514 6 17 116 0.952380952 1.301029996 0 0.055555556 0.19047619 18 1 0 20 2L:8212043-8212099 6 CG8372 FBtr0079634|FBtr0079633 8212037|8212037 8212118|8212118 ACATAT 6mer3-8 dme-miR-190-5p 2L - 8212047 8212080 3'utr CG8372 FlyBase G6921.1 TATGTACATATGACGTCCAATAAAGGATTCATTC 11 8212070 0.951112993 3 11 61 1 1.204119983 0 0.454545455 0.625 11 0 0 16 2L:8212047-8212080 6 13 1002 FBgn0032000 110.3333333 17.38 26.14666667 0.117824773 0.747986191 0.497195309 -5 -5 -5 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 2L 8218103 8218109 - 2L_8218103_8218109_- 0.620204266 0.620204266 0.620204266 0 Snx6 FBtr0079631|FBtr0306170 8218069|8218069 8218410|8218410 2L - 8218050 8218194 3'utr Snx6 FlyBase G8936.1 GTTTTGTGAACAGAGCGCTTTTATATTTGTCAAACAAGCATTCCTCTCTACAGCATAAACTACAACTACATATATTGTAAACACTTGCATTTGAAGCAGAATATAAACGAGAAATATTGTACAGAAGGCTGGCTGTTTGTGAGCA 85 8218110 0.928082335 17 81 538 0.981481481 1.548184611 0.12962963 0.2 0.37037037 85 0 2 106 2L:8218050-8218194 7 Snx6 FBtr0079631|FBtr0306170 8218069|8218069 8218410|8218410 TGCATTT 7mer-m8 dme-miR-277-3p 2L - 8218059 8218150 3'utr Snx6 FlyBase G6935.1 TCTCTACAGCATAAACTACAACTACATATATTGTAAACACTTGCATTTGAAGCAGAATATAAACGAGAAATATTGTACAGAAGGCTGGCTGT 39 8218110 0.95960387 6 34 240 0.886792453 1.371067862 0.075471698 0.333333333 0.509433962 39 5 1 47 2L:8218059-8218150 7 35 1003 FBgn0032005 1985.913333 134.4066667 205.9133333 0.017624133 0.26040375 0.169974423 1 1 1 0.01 dme-miR-7-5p 6mer3-8 GTCTTC 2L 8258679 8258684 - 2L_8258679_8258684_- 1 1 1 0 Btk29A FBtr0112836 8258371 8260537 2L - 8258659 8258684 3'utr Btk29A FlyBase G8996.1 GTCTTCAAAGTGGCAGTGACATGTTG 28 8258674 0.74156704 3 22 143 0.806451613 0.795880017 0.838709677 0.107142857 0.193548387 28 3 3 25 2L:8258659-8258684 6 Btk29A FBtr0112836 8258371 8260537 GTCTTC 6mer3-8 dme-miR-7-5p 2L - 8258662 8258684 3'utr Btk29A FlyBase G6986.1 GTCTTCAAAGTGGCAGTGACATG 23 8258674 0.724213884 5 19 117 0.833333333 1.477121255 1 0.434782609 0.638888889 23 6 0 30 2L:8258662-8258684 6 25.5 1004 FBgn0003502 699.44 22.40333333 34.31333333 0.036457738 1.138223479 0.74315135 -10 -10 -10 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2L 8259591 8259597 - 2L_8259591_8259597_- 0.808818836 0.808818836 0.808818836 0 Btk29A FBtr0330693|FBtr0330693|FBtr0330692|FBtr0330692|FBtr0079618|FBtr0079618|FBtr0079615|FBtr0079615|FBtr0112835|FBtr0112835|FBtr0112836|FBtr0112836|FBtr0079617|FBtr0079617 8259503|8259503|8259503|8259503|8258753|8258753|8259503|8259503|8259503|8259503|8258371|8258371|8259503|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537 2L - 8259578 8259607 3'utr Btk29A FlyBase G8997.1 ATGAACGTTTTACTTAATTAATTTTATCAT 9 8259599 0.818557822 2 9 112 1 1.041392685 0.636363636 0.222222222 0.363636364 9 0 0 11 2L:8259578-8259607 7 Btk29A FBtr0112836|FBtr0112836|FBtr0079617|FBtr0079617|FBtr0079615|FBtr0079615|FBtr0112835|FBtr0112835|FBtr0079618|FBtr0079618|FBtr0330693|FBtr0330693|FBtr0330692|FBtr0330692 8258371|8258371|8259503|8259503|8259503|8259503|8259503|8259503|8258753|8258753|8259503|8259503|8259503|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2L - 8259580 8259608 3'utr Btk29A FlyBase G6987.1 TATGAACGTTTTACTTAATTAATTTTATC 7 8259599 0.725815484 3 6 82 0.888888889 0.903089987 0.333333333 0.285714286 0.444444444 7 1 0 8 2L:8259580-8259608 7 8 1005 FBgn0003502 699.44 22.40333333 34.31333333 0.011437722 0.357089719 0.233145522 2 2 2 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2L 8259816 8259822 - 2L_8259816_8259822_- 0.521223855 0.521223855 0.521223855 0 Btk29A FBtr0330693|FBtr0330692|FBtr0079618|FBtr0079615|FBtr0112835|FBtr0112836|FBtr0079617 8259503|8259503|8258753|8259503|8259503|8258371|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537 2L - 8259790 8260037 3'utr Btk29A FlyBase G9000.1 GTGCTAAGTAAAATATGATTATCTCTAAAGAATGATAGAAACAAACAAACAAGAAAACTGATTATGCATTAAATATTAAATGTAAGCCTCAAGTCGAAAGCGAAATGTTTGCACAACTGATAAAGGATGAAGGAACCGAAGGATGATAAGAAAAGAGTTCGCCAAGAAACATAAACGATTTTTAGACTAGATTTGTACGTGCGTAGTTTAAGTTTTGTGATTTATTGTTTAATTCTTGCAGACGATTT 516 8259816 0.98641716 35 504 6584 0.968152866 1.938805539 0.643312102 0.158914729 0.308917197 516 14 6 608 2L:8259790-8260037 7 Btk29A FBtr0112836|FBtr0079617|FBtr0079615|FBtr0112835|FBtr0079618|FBtr0330693|FBtr0330692 8258371|8259503|8259503|8259503|8258753|8259503|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 8259778 8259865 3'utr Btk29A FlyBase G6988.1 AAACGATTTTTAGACTAGATTTGTACGTGCGTAGTTTAAGTTTTGTGATTTATTGTTTAATTCTTGCAGACGATTTTTATTTTTATTT 409 8259816 0.994162455 17 405 5327 0.988906498 2.318063335 0.703645008 0.393643032 0.606973059 409 5 2 624 2L:8259778-8259865 7 430.5 1006 FBgn0003502 699.44 22.40333333 34.31333333 0.615492394 19.21589049 12.54614338 -6 -6 -6 0.01 dme-miR-277-3p 6mer3-8 TGCATT 2L 8260170 8260175 - 2L_8260170_8260175_- 1 1 1 0 Btk29A FBtr0330693|FBtr0330692|FBtr0079616|FBtr0079618|FBtr0079615|FBtr0112835|FBtr0112836|FBtr0079617 8259503|8259503|8260069|8258753|8259503|8259503|8258371|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537 2L - 8260134 8260233 3'utr Btk29A FlyBase G9001.1 ACGAAGCGCAACAACTGACAGTCACATATAGTAACTATATTAAATGAGAAAACGGAAATGCATTAAAGTATAGAGAACTGTAGTTAATAGTCAAATTTTT 57 8260171 0.938869596 10 55 223 0.984126984 1.792391689 0.349206349 0.105263158 0.19047619 57 1 0 62 2L:8260134-8260233 6 Btk29A FBtr0112836|FBtr0079617|FBtr0079615|FBtr0112835|FBtr0079616|FBtr0079618|FBtr0330693|FBtr0330692 8258371|8259503|8259503|8259503|8260069|8258753|8259503|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537 TGCATT 6mer3-8 dme-miR-277-3p 2L - 8260156 8260229 3'utr Btk29A FlyBase G6990.1 AGCGCAACAACTGACAGTCACATATAGTAACTATATTAAATGAGAAAACGGAAATGCATTAAAGTATAGAGAAC 48 8260171 0.961051709 5 41 189 0.855072464 1.469822016 0.275362319 0.333333333 0.536231884 48 9 1 59 2L:8260156-8260229 6 37.5 1007 FBgn0003502 699.44 22.40333333 34.31333333 0.05361432 1.673858057 1.092869633 -4 -4 -4 0.01 dme-miR-283-5p 6mer3-8 TGATAT 2L 8260274 8260279 - 2L_8260274_8260279_- 1 1 1 0 Btk29A FBtr0330693|FBtr0330692|FBtr0079616|FBtr0079618|FBtr0079615|FBtr0112835|FBtr0112836|FBtr0079617 8259503|8259503|8260069|8258753|8259503|8259503|8258371|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537 2L - 8260242 8260307 3'utr Btk29A FlyBase G9002.1 TTATATGATAGAGCTAGAGCTGAGCAAATGATATCATTATGTTTATGAACGCGTTAACTGTTAGAC 108 8260279 0.854810623 10 103 726 0.953488372 1.788875116 0.255813953 0.157407407 0.294573643 108 5 1 123 2L:8260242-8260307 6 Btk29A FBtr0112836|FBtr0079617|FBtr0079615|FBtr0112835|FBtr0079616|FBtr0079618|FBtr0330693|FBtr0330692 8258371|8259503|8259503|8259503|8260069|8258753|8259503|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537 TGATAT 6mer3-8 dme-miR-283-5p 2L - 8260258 8260311 3'utr Btk29A FlyBase G6991.1 TGGATTATATGATAGAGCTAGAGCTGAGCAAATGATATCATTATGTTTATGAAC 69 8260279 0.8334676 9 66 433 0.91588785 1.088136089 0.392523364 0.405797101 0.61682243 69 2 7 98 2L:8260258-8260311 6 80.5 1008 FBgn0003502 699.44 22.40333333 34.31333333 0.115092074 3.593215295 2.346026812 0 0 0 0.01 dme-miR-283-5p 6mer2-7 GATATT 2L 8260464 8260469 - 2L_8260464_8260469_- 0.999999999 1 0.999999999 0 Btk29A FBtr0330693|FBtr0330692|FBtr0079616|FBtr0079618|FBtr0079615|FBtr0112835|FBtr0112836|FBtr0079617 8259503|8259503|8260069|8258753|8259503|8259503|8258371|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537 2L - 8260420 8260537 3'utr Btk29A FlyBase G9004.1 GGAGCGGACCAGATTGCGGCACCCATCGCCTGAAATTAACACGCACTGAACACACTGAAGCATCTTAAGATATTGAAGAACGTTAAAGGCATTACATTTAAGGTTACAAAAGCGGCGA 29 8260482 0.958395383 15 27 141 0.933333333 1.146128036 0.266666667 0.034482759 0.066666667 29 1 1 28 2L:8260420-8260537 6 Btk29A FBtr0112836|FBtr0079617|FBtr0079615|FBtr0112835|FBtr0079616|FBtr0079618|FBtr0330693|FBtr0330692 8258371|8259503|8259503|8259503|8260069|8258753|8259503|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537 GATATT 6mer2-7 dme-miR-283-5p 2L - 8260431 8260539 stop_codon Btk29A FlyBase G6992.1 AAGGAGCGGACCAGATTGCGGCACCCATCGCCTGAAATTAACACGCACTGAACACACTGAAGCATCTTAAGATATTGAAGAACGTTAAAGGCATTACATTTAAGGTTAC 24 8260499 0.958808004 10 19 95 0.857142857 1.176091259 0.2 0.375 0.571428571 24 4 1 30 2L:8260431-8260539 6 11.5 1009 FBgn0003502 699.44 22.40333333 34.31333333 0.016441725 0.513316471 0.335146687 13 30 21.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 8309906 8309911 - 2L_8309906_8309911_- 1 0.999999655 0.999999827 2.12E-07 CG7810 FBtr0079612 8309874 8310028 2L - 8309890 8309930 3'utr CG7810 FlyBase G9032.1 TCTTAGCCTTAAAAACTTTTGATCTTAGACACTAGAATACA 9 8309911 0.684019832 3 9 79 1 1 0 0.111111111 0.2 9 0 0 10 2L:8309890-8309930 6 CG7810 FBtr0079612 8309874 8310028 TGATCT 6mer3-8 dme-bantam-3p 2L - 8309893 8309969 3'utr CG7810 FlyBase G7013.1 TCAGCATTCTGCAGCAATAGACTTTAATGTTAATCTTATTCTTAGCCTTAAAAACTTTTGATCTTAGACACTAGAAT 11 8309911 0.973331534 6 10 95 0.923076923 1.079181246 0 0.181818182 0.307692308 11 1 0 12 2L:8309893-8309969 6 5.5 1010 FBgn0032017 74.63666667 7.006666667 10.82 0.073690322 0.784966698 0.50831793 0 0 0 0.01 dme-miR-970-3p 6mer3-8 TCTTAT 2L 8309931 8309936 - 2L_8309931_8309936_- 1 1 1 0 CG7810 FBtr0079612 8309874 8310028 2L - 8309933 8309976 3'utr CG7810 FlyBase G9033.1 AGGATACTCAGCATTCTGCAGCAATAGACTTTAATGTTAATCTT 18 8309952 0.902436341 4 16 139 0.894736842 1.230448921 0.052631579 0.055555556 0.105263158 18 2 0 17 2L:8309933-8309976 3 CG7810 FBtr0079612 8309874 8310028 TCTTAT 6mer3-8 dme-miR-970-3p 2L - 8309893 8309969 3'utr CG7810 FlyBase G7013.1 TCAGCATTCTGCAGCAATAGACTTTAATGTTAATCTTATTCTTAGCCTTAAAAACTTTTGATCTTAGACACTAGAAT 11 8309952 0.973331534 6 10 95 0.923076923 1.079181246 0 0.181818182 0.307692308 11 1 0 12 2L:8309893-8309969 6 4 1011 FBgn0032017 74.63666667 7.006666667 10.82 0.053592961 0.570884872 0.369685767 16 16 16 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC 2L 8316762 8316768 + 2L_8316762_8316768_+ 0.66161562 0.661615475 0.661615547 7.07E-08 CG7806 FBtr0079600 8316672 8317011 2L + 8316735 8316784 3'utr CG7806 FlyBase G3042.1 ATTACTTTGTTTAATTTTTATCATACTTGTGTTCCTAACTAACAATTCCA 80 8316761 0.775187002 6 79 830 0.979166667 1.496006599 0 0.175 0.3125 80 0 2 94 2L:8316735-8316784 7 CG7806 FBtr0079600 8316672 8317011 TGTGTTC 7mer-m8 dme-miR-317-3p 2L + 8316736 8316782 3'utr CG7806 FlyBase G2399.1 TTACTTTGTTTAATTTTTATCATACTTGTGTTCCTAACTAACAATTC 54 8316761 0.947220572 5 52 531 0.972972973 1.857332496 0 0.277777778 0.472972973 54 2 0 72 2L:8316736-8316782 7 66.5 1012 FBgn0032018 954.6066667 23.09666667 35.38666667 0.069662199 2.879203348 1.879238885 1 1 1 0.01 dme-miR-304-5p 8mer-A1 TGAGATTA 2L 8317181 8317188 - 2L_8317181_8317188_- 0.625363359 0.625255293 0.625309326 7.64E-05 mtsh FBtr0301169 8316887 8317538 2L - 8317171 8317225 stop_codon mtsh FlyBase G9035.1 TTCAACTATGAAATCTAAGTGAAAAAGTATTGACGGTTGAGATTATCAACTGAAA 11 8317188 0.742529854 5 10 65 0.923076923 1.079181246 0 0.090909091 0.230769231 11 1 0 12 2L:8317171-8317225 8 mtsh FBtr0301169|FBtr0301170 8316887|8316887 8317538|8317207 TGAGATTA 8mer-A1 dme-miR-304-5p 2L - 8317171 8317264 stop_codon mtsh FlyBase G7016.1 CAGTTTGATCACATCATGGGCAGGCCAGGCGAAAAGCTCTTCAACTATGAAATCTAAGTGAAAAAGTATTGACGGTTGAGATTATCAACTGAAA 13 8317189 0.970752231 6 11 72 1 1.204119983 0.25 0.230769231 0.375 13 0 0 16 2L:8317171-8317264 8 5 1013 FBgn0262598 6.67 0.32 0.476666667 0.749625187 15.625 10.48951049 0 1 0.5 0.01 dme-bantam-3p 7mer-m8 TGATCTC 2L 8317316 8317322 - 2L_8317316_8317322_- 0.661615243 0.661615243 0.661615243 0 mtsh FBtr0301169 8316887 8317538 2L - 8317293 8317351 3'utr mtsh FlyBase G9036.1 TACACGGACGAGAACCTCCTCTACTACATTGATCTCTACGAGCGCTCTGTGAACGACAT 298 8317323 0.965429051 10 291 2147 0.973760933 2.222716471 0.049562682 0.127516779 0.241982507 298 8 1 334 2L:8317293-8317351 7 mtsh FBtr0301169 8316887 8317538 TGATCTC 7mer-m8 dme-bantam-3p 2L - 8317290 8317349 3'utr mtsh FlyBase G7017.1 CACGGACGAGAACCTCCTCTACTACATTGATCTCTACGAGCGCTCTGTGAACGACATGCT 180 8317323 0.840018044 10 173 1259 0.962199313 2.447158031 0.06185567 0.405555556 0.632302405 180 11 0 280 2L:8317290-8317349 7 229.5 1014 FBgn0262598 6.67 0.32 0.476666667 34.4077961 717.1875 481.4685315 1 1 1 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 832022 832028 + 2L_832022_832028_+ 0.658999527 0.658999527 0.658999527 0 dock FBtr0332973|FBtr0078013|FBtr0078014|FBtr0078015 831922|831922|831922|831922 832331|833241|833241|833241 2L + 831979 832091 3'utr dock FlyBase G911.1 AACACACATATGCAACACAAAGATATACCAAGGCTAACTTGTAGGCAGCTCAGCTCAGCGCGACGTGTAGTTCAATATAGTTCGGTTTGGATATTTAATTATGGACTCAGTTT 38 832019 0.850271694 9 37 216 0.975609756 1.602059991 0.268292683 0.078947368 0.146341463 38 1 0 40 2L:831979-832091 7 dock FBtr0332973|FBtr0078013|FBtr0078014|FBtr0078015 831922|831922|831922|831922 832331|833241|833241|833241 GGCAGCT 7mer-m8 dme-miR-980-3p 2L + 831974 832042 3'utr dock FlyBase G727.1 TCAACAACACACATATGCAACACAAAGATATACCAAGGCTAACTTGTAGGCAGCTCAGCTCAGCGCGAC 13 832019 0.958801057 5 13 62 1 1.301029996 0.2 0.538461538 0.7 13 0 0 20 2L:831974-832042 7 17 1015 FBgn0010583 684.1466667 22.6 34.75 0.024848473 0.752212389 0.489208633 3 3 3 0.01 dme-miR-999-3p 6mer2-7 GTTAAC 2L 832231 832236 + 2L_832231_832236_+ 1 1 1 0 dock FBtr0332973|FBtr0078013|FBtr0078014|FBtr0078015 831922|831922|831922|831922 832331|833241|833241|833241 2L + 832198 832271 3'utr dock FlyBase G912.1 ACTAAATTAACGCTTAATTACCGCATTGGCTATGTTAACGAGGAACGAGAAACTCAAGAACTCATCATTGCATT 9 832223 0.967938735 5 8 50 0.909090909 1 0.181818182 0.222222222 0.363636364 9 1 0 10 2L:832198-832271 6 dock FBtr0332973|FBtr0078013|FBtr0078014|FBtr0078015 831922|831922|831922|831922 832331|833241|833241|833241 GTTAAC 6mer2-7 dme-miR-999-3p 2L + 832192 832247 3'utr dock FlyBase G728.1 GAATTAACTAAATTAACGCTTAATTACCGCATTGGCTATGTTAACGAGGAACGAGA 5 832224 0.982897718 4 5 34 1 0.84509804 0 0.4 0.571428571 5 0 0 7 2L:832192-832247 6 3 1016 FBgn0010583 684.1466667 22.6 34.75 0.004385025 0.132743363 0.086330935 8 7 7.5 0.01 dme-miR-283-5p 6mer3-8 TGATAT 2L 832694 832699 + 2L_832694_832699_+ 1 1 1 0 dock FBtr0078013|FBtr0078014|FBtr0078015 831922|831922|831922 833241|833241|833241 2L + 832675 832742 3'utr dock FlyBase G913.1 AAAACAAAACAAATACACTTGATATCTCCGCGCGGAGTCTGCTCCCCGCATTATTATAAACATAATCT 48 832694 0.861152199 7 46 247 0.966101695 1.755874856 0.084745763 0.229166667 0.372881356 48 2 0 57 2L:832675-832742 6 dock FBtr0078013|FBtr0078014|FBtr0078015 831922|831922|831922 833241|833241|833241 TGATAT 6mer3-8 dme-miR-283-5p 2L + 832675 832725 3'utr dock FlyBase G729.1 AAAACAAAACAAATACACTTGATATCTCCGCGCGGAGTCTGCTCCCCGCAT 27 832694 0.944894295 7 25 141 0.860465116 1.568201724 0.186046512 0.37037037 0.604651163 27 6 0 37 2L:832675-832725 6 30 1017 FBgn0010583 684.1466667 22.6 34.75 0.043850247 1.327433628 0.863309353 0 0 0 0.01 dme-miR-980-5p 7mer-A1 AAAAACA 2L 833599 833605 - 2L_833599_833605_- 0.782911824 0.782911824 0.782911824 0 drongo FBtr0302121|FBtr0302612|FBtr0078037|FBtr0302120 833582|833582|833585|833582 834544|834544|834544|834544 2L - 833595 833656 3'utr drongo FlyBase G6668.1 TGTCAAACATTATCGAAGCCTTAAAGTTATTTAAAACTACGAAATTTCAATAAAAACAAATA 14 833635 0.736506047 9 14 91 1 1.278753601 0.210526316 0.214285714 0.421052632 14 0 0 19 2L:833595-833656 7 drongo FBtr0078037|FBtr0302120|FBtr0302121|FBtr0302612 833585|833582|833582|833582 834544|834544|834544|834544 AAAAACA 7mer-A1 dme-miR-980-5p 2L - 833600 833657 3'utr drongo FlyBase G5214.1 GTGTCAAACATTATCGAAGCCTTAAAGTTATTTAAAACTACGAAATTTCAATAAAAAC 14 833612 0.75494106 8 14 85 1 1.447158031 0.178571429 0.642857143 0.821428571 14 0 0 28 2L:833600-833657 5 4 1018 FBgn0020304 1071.886667 39.91333333 61.24666667 0.003731738 0.100217137 0.065309677 30 7 18.5 0.01 dme-miR-190-5p 6mer3-8 ACATAT 2L 833778 833783 - 2L_833778_833783_- 1 1 1 0 drongo FBtr0302121|FBtr0302612|FBtr0078037|FBtr0302120 833582|833582|833585|833582 834544|834544|834544|834544 2L - 833728 833875 3'utr drongo FlyBase G6670.1 TATACACTAGTACGTGCGATATCGGCCGTGCAGATAGATTGCTCAGCTCGCGAGTCAAGCCTCTTTTGGTTGCACCCACGGCAGACATTTGTACATATACTGTCTGATTGTAAGCCTCGTGTAATACCTCCATTAACACCACTCCCCC 21 833785 0.96832023 12 19 108 0.931034483 1.431363764 0.103448276 0.333333333 0.517241379 21 2 0 27 2L:833728-833875 6 drongo FBtr0078037|FBtr0302120|FBtr0302121|FBtr0302612 833585|833582|833582|833582 834544|834544|834544|834544 ACATAT 6mer3-8 dme-miR-190-5p 2L - 833727 833785 3'utr drongo FlyBase G5215.1 GTACATATACTGTCTGATTGTAAGCCTCGTGTAATACCTCCATTAACACCACTCCCCCA 5 833768 0.972304029 3 5 31 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 2L:833727-833785 6 2.5 1019 FBgn0020304 1071.886667 39.91333333 61.24666667 0.002332336 0.062635711 0.040818548 2 -15 -6.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 833930 833935 - 2L_833930_833935_- 1 1 1 0 drongo FBtr0302121|FBtr0302612|FBtr0078037|FBtr0302120 833582|833582|833585|833582 834544|834544|834544|834544 2L - 833876 833976 3'utr drongo FlyBase G6671.1 AGACACAGTTAGTACAGATACAGATATACATATACGCTTTTGTACCTAATGAATTGCTTCTTGTTTCCATTGCTAATCATCTGCTTTTCGTGTGCTAATTT 430 833936 0.68117376 18 422 3683 0.980988593 2.411619706 0.053231939 0.181395349 0.330798479 430 9 1 516 2L:833876-833976 6 drongo FBtr0078037|FBtr0302120|FBtr0302121|FBtr0302612 833585|833582|833582|833582 834544|834544|834544|834544 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L - 833910 834018 3'utr drongo FlyBase G5217.1 TATAACGTACGACTATACATATACGGATACAGATACAGATTCAGACACAGTTAGTACAGATACAGATATACATATACGCTTTTGTACCTAATGAATTGCTTCTTGTTTC 293 833936 0.852298231 18 281 2332 0.972157773 2.145092768 0.053364269 0.348122867 0.556844548 293 10 2 419 2L:833910-834018 6 342 1020 FBgn0020304 1071.886667 39.91333333 61.24666667 0.319063583 8.568565225 5.583977359 1 1 1 0.01 dme-miR-184-5p 7mer-A1 GATAAGA 2L 834071 834077 - 2L_834071_834077_- 0.782911824 0.782911824 0.782911824 0 drongo FBtr0302121|FBtr0302612|FBtr0078037|FBtr0302120 833582|833582|833585|833582 834544|834544|834544|834544 2L - 833987 834109 3'utr drongo FlyBase G6672.1 TTGTCTTTGTCCCATTTAGCACTTTCGTTGCGGATAAGAACTTTGTCAGTTATTGATTGTGTGGCCTTAATAAGATTATAAAACTAAATATTATAACGTACGACTATACATATACGGATACAG 26 834048 0.843707618 15 24 203 0.933333333 1.447158031 0.233333333 0.153846154 0.266666667 26 2 0 28 2L:833987-834109 7 drongo FBtr0078037|FBtr0302120|FBtr0302121|FBtr0302612 833585|833582|833582|833582 834544|834544|834544|834544 GATAAGA 7mer-A1 dme-miR-184-5p 2L - 834027 834119 3'utr drongo FlyBase G5218.1 ATCCTCGTACTTGTCTTTGTCCCATTTAGCACTTTCGTTGCGGATAAGAACTTTGTCAGTTATTGATTGTGTGGCCTTAATAAGATTATAAAA 17 834049 0.955377644 10 17 151 1 1.397940009 0.32 0.294117647 0.52 17 0 0 25 2L:834027-834119 7 5.5 1021 FBgn0020304 1071.886667 39.91333333 61.24666667 0.005131139 0.137798564 0.089800805 -29 -28 -28.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 8378334 8378339 - 2L_8378334_8378339_- 1 0.706146437 0.853073218 0.207785873 Aats-ala FBtr0079721|FBtr0079722 8378260|8378260 8378418|8378418 2L - 8378274 8378394 3'utr Aats-ala FlyBase G9076.1 AAGACCTTCAATTACTCACAATTTTGATACACAACTATGCTTAATCTTAATCCGTTGATCTGTTTTAAACAGCATTTCAGATGAATTTTTACGGCTATTTATAAAATAAAAGCATTTATAC 25 8378338 0.982779873 14 24 190 0.941176471 1.505149978 0.088235294 0.28 0.470588235 25 2 0 32 2L:8378274-8378394 6 Aats-ala FBtr0079722|FBtr0079721 8378260|8378260 8378418|8378418 TGATCT 6mer3-8 dme-bantam-3p 2L - 8378328 8378399 3'utr Aats-ala FlyBase G7040.1 GCGGCAAGACCTTCAATTACTCACAATTTTGATACACAACTATGCTTAATCTTAATCCGTTGATCTGTTTTA 13 8378369 0.984157154 7 13 103 1 1.278753601 0.210526316 0.307692308 0.526315789 13 0 0 19 2L:8378328-8378399 6 6 1022 FBgn0027094 1216.56 46.45 71.26333333 0.004931939 0.129171152 0.084194771 -1 30 14.5 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2L 8388308 8388314 + 2L_8388308_8388314_+ 0.521223855 0.521223855 0.521223855 0 CG13384 FBtr0303469|FBtr0303468|FBtr0079655|FBtr0303470|FBtr0303467|FBtr0079658|FBtr0079653|FBtr0079657|FBtr0079654|FBtr0079656|FBtr0303471 8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134 8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804 2L + 8388119 8388333 stop_codon CG13384 FlyBase G3111.1 ACGACAGAACCCACTGAGTTTAATCGAAATAAGCGAATCGAAAACAGAACCTGGCTAGTTCTGCCTACAAATGTGTGCGAATTTATGACGAAGGCTTTATGTAGTTACACTCAGACTACGAATATGTTTACCATTAGTTGTTTACCATTTCCCAACTGGTATCGGTCCAGTCCAGTGGCGGTGCTTTAGTGTGATTAATTTATATTTATGGCAAA 396 8388304 0.959942088 39 386 2771 0.977505112 2.202306642 0.355828221 0.191919192 0.345603272 396 9 2 478 2L:8388119-8388333 7 CG13384 FBtr0303467|FBtr0079655|FBtr0303468|FBtr0303469|FBtr0303471|FBtr0303470|FBtr0079656|FBtr0079657|FBtr0079654|FBtr0079658|FBtr0079653 8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134 8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804 TGTGATT 7mer-m1 dme-miR-308-3p 2L + 8388267 8388329 3'utr CG13384 FlyBase G2454.2 TTCCCAACTGGTATCGGTCCAGTCCAGTGGCGGTGCTTTAGTGTGATTAATTTATATTTATGG 257 8388304 0.681702752 15 249 1796 0.97721519 2.10946605 0.432911392 0.373540856 0.592405063 257 7 2 386 2L:8388267-8388329 7 158 1023 FBgn0032036 4208.186667 203.2133333 311 0.037545863 0.777508038 0.508038585 4 4 4 0.01 dme-miR-8-3p 6mer2-7 AGTATT 2L 8388494 8388499 + 2L_8388494_8388499_+ 1 1 1 0 CG13384 FBtr0303469|FBtr0303468|FBtr0079655|FBtr0303470|FBtr0303467|FBtr0079658|FBtr0079653|FBtr0079657|FBtr0079654|FBtr0079656|FBtr0303471 8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134 8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804 2L + 8388365 8388551 3'utr CG13384 FlyBase G3112.1 AGCTGCAATCGTACCAGACAATAACTAGCATTTTAAGTAGAAAGTTTTTCAACATTTGTTCAGTTTGTCAGTTGGAGATTATTTCTGTGTTAACTCGATGACCGCACAATGCCAAACGTGATTTTACGTAGTATTCTTAACTAAATTATTATTTAGCTTTTACTATGTAGTCTAGGTCGGGGCAGAT 262 8388487 0.84918916 35 241 2098 0.917491749 1.745074792 0.108910891 0.145038168 0.260726073 262 21 4 278 2L:8388365-8388551 6 CG13384 FBtr0303467|FBtr0079655|FBtr0303468|FBtr0303469|FBtr0303471|FBtr0303470|FBtr0079656|FBtr0079657|FBtr0079654|FBtr0079658|FBtr0079653 8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134 8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804 AGTATT 6mer2-7 dme-miR-8-3p 2L + 8388364 8388521 3'utr CG13384 FlyBase G2455.1 CAGCTGCAATCGTACCAGACAATAACTAGCATTTTAAGTAGAAAGTTTTTCAACATTTGTTCAGTTTGTCAGTTGGAGATTATTTCTGTGTTAACTCGATGACCGCACAATGCCAAACGTGATTTTACGTAGTATTCTTAACTAAATTATTATTTAGC 163 8388487 0.816031338 28 149 1260 0.91902834 1.753965866 0.149797571 0.404907975 0.607287449 163 17 3 227 2L:8388364-8388521 6 70.5 1024 FBgn0032036 4208.186667 203.2133333 311 0.016753059 0.346926055 0.226688103 7 7 7 0.01 dme-miR-184-5p 6mer3-8 TGATAA 2L 8407982 8407987 + 2L_8407982_8407987_+ 1 1 1 0 emb FBtr0079663|FBtr0346708 8407923|8407923 8408853|8408280 2L + 8407914 8408016 stop_codon emb FlyBase G3150.1 AGGACGAATAGATGTCGATGTCGATGTCGATGTCACTGAGCTAGAATGTTTTAGTTGATGCTTGAGAATGATAAAAGGATGGTGATGTATGAGTGTTTCTCGA 28 8407993 0.982847339 12 25 189 0.9 1.431363764 0.233333333 0.071428571 0.133333333 28 3 0 27 2L:8407914-8408016 6 emb FBtr0079663|FBtr0346708 8407923|8407923 8408853|8408280 TGATAA 6mer3-8 dme-miR-184-5p 2L + 8407966 8408019 3'utr emb FlyBase G2490.1 AGTTGATGCTTGAGAATGATAAAAGGATGGTGATGTATGAGTGTTTCTCGAGCG 15 8407993 0.977319982 7 14 94 0.95 1.278753601 0.4 0.266666667 0.45 15 1 0 19 2L:8407966-8408019 6 16.5 1025 FBgn0020497 2941.623333 79.20666667 121.6866667 0.005609148 0.208315798 0.135594149 -11 -11 -11 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 8412226 8412233 - 2L_8412226_8412233_- 0.500120318 0.500120318 0.500120318 0 CG13398 FBtr0331990 8412142 8413550 2L - 8412158 8412255 3'utr CG13398 FlyBase G9111.1 ATGAATGTTCTTTCGTTTACATGTACTTAAAATCGCTGCTTAGTCGGCGGCATAAACTAAATTATTGTTAGTGTCTAAGACGAAATACGTGCAATAAA 207 8412234 0.989014861 8 201 1909 0.963855422 2.380211242 0.297188755 0.164251208 0.305220884 207 9 0 240 2L:8412158-8412255 8 CG13398 FBtr0331990 8412142 8413550 GTACTTAA 8mer-A1 dme-miR-252-5p 2L - 8412202 8412255 3'utr CG13398 FlyBase G7070.1 ATGAATGTTCTTTCGTTTACATGTACTTAAAATCGCTGCTTAGTCGGCGGCATA 164 8412234 0.813761594 5 149 1436 0.920704846 1.718086295 0.268722467 0.298780488 0.49339207 164 15 3 209 2L:8412202-8412255 8 183.5 1026 FBgn0032042 445.3533333 18.47333333 28.30333333 0.412032394 9.933237099 6.483335296 1 1 1 0.01 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 8412354 8412360 - 2L_8412354_8412360_- 0.823298837 0.823298837 0.823298837 0 CG13398 FBtr0331990 8412142 8413550 2L - 8412341 8412400 3'utr CG13398 FlyBase G9113.1 AAAAAAAAACAATGGTAGAAAGCATCGCGTTGCATTGTCCGCTGTGAGTTTATAATTTTT 35 8412365 0.98317773 8 31 285 0.909090909 1.602059991 0.295454545 0.257142857 0.409090909 35 4 0 40 2L:8412341-8412400 7 CG13398 FBtr0331990 8412142 8413550 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L - 8412281 8412383 3'utr CG13398 FlyBase G7071.1 GAAAGCATCGCGTTGCATTGTCCGCTGTGAGTTTATAATTTTTTACATATATATATCGCTGAATTGTTATTCAATTTGTTAGGAGTTATATACACTGAGCATT 23 8412365 0.979078631 11 21 203 0.864864865 1.505149978 0.27027027 0.434782609 0.648648649 23 5 0 32 2L:8412281-8412383 7 22.5 1027 FBgn0032042 445.3533333 18.47333333 28.30333333 0.050521683 1.217971851 0.794959369 5 5 5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2L 8412803 8412809 - 2L_8412803_8412809_- 0.823349562 0.823349562 0.823349562 0 CG13398 FBtr0079710|FBtr0331990 8412409|8412142 8413550|8413550 2L - 8412799 8412860 3'utr CG13398 FlyBase G9116.1 CGAATTTACTGCACGAGATTGTGGTAAAGTGAAATTTGAAGAGTGATTTGTCCAAAGATATG 13 8412812 0.988896323 5 10 88 0.846153846 0.740362689 0.615384615 0.083333333 0.153846154 12 1 1 11 2L:8412799-8412860 7 CG13398 FBtr0331990|FBtr0079710 8412142|8412409 8413550|8413550 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 8412799 8412859 3'utr CG13398 FlyBase G7073.1 GAATTTACTGCACGAGATTGTGGTAAAGTGAAATTTGAAGAGTGATTTGTCCAAAGATATG 13 8412813 0.864836602 5 12 83 1 1.380211242 0.333333333 0.461538462 0.708333333 13 0 0 24 2L:8412799-8412859 7 8 1028 FBgn0032042 445.3533333 18.47333333 28.30333333 0.017963265 0.433056658 0.28265222 3 4 3.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 8430817 8430822 + 2L_8430817_8430822_+ 0.999795325 0.983437707 0.991616516 0.01156657 Akap200 FBtr0079665|FBtr0340241|FBtr0079667|FBtr0340239|FBtr0340240|FBtr0079666 8430366|8430366|8430366|8430366|8430366|8430366 8430977|8430977|8430977|8430977|8431297|8430977 2L + 8430787 8430973 3'utr Akap200 FlyBase G3176.1 ACAAGCGCATACATACCATTCTCATATTGATGATCTTGATAGCGAAAGAATCAACAAATCATATACGATGAAATGATGAAAGTGAGGAGAATTTTTTGAATAATTTCTACTATACATTTAACTGTAAGTTCGAAGAAATTTGTAAAGAATTTTTGGACGAAATATTGGATAAAATATATATTATAAA 302 8430817 0.734427636 34 293 2478 0.970430108 2.080385947 0.301075269 0.195364238 0.346774194 302 9 2 361 2L:8430787-8430973 6 Akap200 FBtr0079667|FBtr0340241|FBtr0079665|FBtr0079666|FBtr0340240|FBtr0340239 8430366|8430366|8430366|8430366|8430366|8430366 8430977|8430977|8430977|8430977|8431297|8430977 TGATCT 6mer3-8 dme-bantam-3p 2L + 8430767 8430891 3'utr Akap200 FlyBase G2513.1 AAGCACACACCATCCACCACACAAGCGCATACATACCATTCTCATATTGATGATCTTGATAGCGAAAGAATCAACAAATCATATACGATGAAATGATGAAAGTGAGGAGAATTTTTTGAATAATT 181 8430817 0.987804543 18 168 1510 0.928030303 1.91204483 0.337121212 0.342541436 0.549242424 181 17 2 245 2L:8430767-8430891 6 203.5 1029 FBgn0027932 6995.416667 397.1466667 611.3966667 0.029090476 0.512405157 0.332844471 0 0 0 0.01 dme-miR-283-5p 7mer-A1 GATATTA 2L 8434136 8434142 - 2L_8434136_8434142_- 0.782911824 0.782911824 0.782911824 0 D12 FBtr0079707 8434056 8434208 2L - 8434125 8434178 3'utr D12 FlyBase G9131.2 TTTATCAAGTCCGCGTCATAGTTCAAATTCTACTGGGATATTAGTTGATATCTA 26 8434160 0.79688726 8 23 210 0.931034483 1.431363764 0.103448276 0.115384615 0.206896552 26 2 0 27 2L:8434125-8434178 7 D12 FBtr0079707 8434056 8434208 GATATTA 7mer-A1 dme-miR-283-5p 2L - 8434127 8434176 3'utr D12 FlyBase G7082.1 TATCAAGTCCGCGTCATAGTTCAAATTCTACTGGGATATTAGTTGATATC 16 8434160 0.825125484 3 14 132 0.904761905 1.278753601 0.095238095 0.3125 0.476190476 16 2 0 19 2L:8434127-8434176 7 10.5 1030 FBgn0027490 415.6666667 15.55333333 23.98666667 0.025260626 0.675096442 0.437743191 18 18 18 0.01 dme-miR-8-3p 6mer2-7 AGTATT 2L 8437951 8437956 + 2L_8437951_8437956_+ 1 1 1 0 Chrac-14 FBtr0100268 8437890 8437996 2L + 8437910 8437966 3'utr Chrac-14 FlyBase G3178.1 ATACGGATCAATTATCCTCTTCAGTCATTAAGAACAAAGCTAGTATTGAGCATTAAC 15 8437929 0.69558085 6 15 107 1 1.397940009 0 0.266666667 0.56 15 0 0 25 2L:8437910-8437966 6 Chrac-14 FBtr0100268 8437890 8437996 AGTATT 6mer2-7 dme-miR-8-3p 2L + 8437917 8437967 3'utr Chrac-14 FlyBase G2515.1 TCAATTATCCTCTTCAGTCATTAAGAACAAAGCTAGTATTGAGCATTAACA 11 8437955 0.955922003 5 11 55 1 1.230448921 0 0.454545455 0.647058824 11 0 0 17 2L:8437917-8437967 6 7 1031 FBgn0043002 655.4866667 147.0666667 225.6233333 0.010679088 0.047597461 0.03102516 22 -4 9 0.01 dme-miR-305-3p 6mer2-7 TGTGCC 2L 8446020 8446025 - 2L_8446020_8446025_- 1 1 1 0 U26 FBtr0089673|FBtr0340244|FBtr0340243 8445859|8445859|8445928 8446091|8448279|8446091 2L - 8445970 8446055 3'utr U26 FlyBase G9138.1 AACTTGTTGCTTAGCAGTAAGATAGAAAAGTGTGCCTGATTAAATACATTAATTTACAGAGGAATACAGAATTTACTTGTATAACT 90 8446025 0.975840022 6 90 570 1 2.008600172 0.058823529 0.122222222 0.225490196 90 0 0 102 2L:8445970-8446055 6 U26 FBtr0340243|FBtr0089673|FBtr0340244 8445928|8445859|8445859 8446091|8446091|8448279 TGTGCC 6mer2-7 dme-miR-305-3p 2L - 8446001 8446048 3'utr U26 FlyBase G7085.1 TGCTTAGCAGTAAGATAGAAAAGTGTGCCTGATTAAATACATTAATTT 56 8446025 0.893205478 3 54 353 0.971830986 1.537819095 0.154929577 0.232142857 0.394366197 56 1 1 69 2L:8446001-8446048 6 70 1032 FBgn0027780 159.9633333 5.64 8.636666667 0.437600283 12.41134752 8.104978773 0 0 0 0.01 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 8449759 8449766 - 2L_8449759_8449766_- 0.625364009 0.625364009 0.625364009 0 fu12 FBtr0079703|FBtr0302160|FBtr0079704|FBtr0340242 8449689|8449689|8449689|8449689 8450088|8450088|8450088|8450088 2L - 8449702 8449787 3'utr fu12 FlyBase G9139.1 TAAGCGCATTTGTTGGATGTTTAGCTTTATGCAAATATTGTATTGATTTATATGTGAATAATGAAATGAGACCTATTTAATAAAAC 60 8449767 0.79673289 15 59 543 0.977272727 1.934498451 0.136363636 0.3 0.522727273 60 2 0 86 2L:8449702-8449787 8 fu12 FBtr0079703|FBtr0302160|FBtr0079704|FBtr0340242 8449689|8449689|8449689|8449689 8450088|8450088|8450088|8450088 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 8449689 8449786 3'utr fu12 FlyBase G7086.1 AAGCGCATTTGTTGGATGTTTAGCTTTATGCAAATATTGTATTGATTTATATGTGAATAATGAAATGAGACCTATTTAATAAAACATTTTGCACTGAA 46 8449767 0.98977421 11 45 441 0.986842105 1.875061263 0.25 0.434782609 0.657894737 46 1 0 75 2L:8449689-8449786 8 40.5 1033 FBgn0026718 82 6.056666667 9.28 0.493902439 6.68684645 4.364224138 1 1 1 0.01 dme-miR-79-3p 6mer2-7 AGCTTT 2L 8449836 8449841 - 2L_8449836_8449841_- 0.999996646 0.97527371 0.987635178 0.01748173 fu12 FBtr0079703|FBtr0302160|FBtr0079704|FBtr0340242 8449689|8449689|8449689|8449689 8450088|8450088|8450088|8450088 2L - 8449823 8449901 3'utr fu12 FlyBase G9140.1 GGGTGAATTTTCGATTAATATTAACTGTTTTACCTCCAGTACATGCATGTGTATGCCCAGAGCTTTTTTCGACTAAGCG 25 8449835 0.989636327 10 22 210 0.896551724 1.414973348 0.206896552 0.16 0.275862069 25 3 0 26 2L:8449823-8449901 6 fu12 FBtr0079703|FBtr0302160|FBtr0079704|FBtr0340242 8449689|8449689|8449689|8449689 8450088|8450088|8450088|8450088 AGCTTT 6mer2-7 dme-miR-79-3p 2L - 8449827 8449872 3'utr fu12 FlyBase G7087.1 TTACCTCCAGTACATGCATGTGTATGCCCAGAGCTTTTTTCGACTA 11 8449835 0.674708868 6 10 77 0.866666667 1.113943352 0.4 0.272727273 0.466666667 11 2 0 13 2L:8449827-8449872 6 13 1034 FBgn0026718 82 6.056666667 9.28 0.158536585 2.146395157 1.400862069 -6 -6 -6 0.01 dme-miR-184-3p 7mer-m8 TCCGTCC 2L 8490388 8490394 + 2L_8490388_8490394_+ 0.661615243 0.661615243 0.661615243 0 CG13088 FBtr0079681 8490347 8490546 2L + 8490368 8490403 3'utr CG13088 FlyBase G3203.1 AAATGACATTTCTACCTCAATCCGTCCGGTATACGA 16 8490388 0.724762169 4 14 112 0.894736842 1.230448921 0 0.1875 0.315789474 16 2 0 17 2L:8490368-8490403 7 CG13088 FBtr0079681 8490347 8490546 TCCGTCC 7mer-m8 dme-miR-184-3p 2L + 8490367 8490400 3'utr CG13088 FlyBase G2532.1 TAAATGACATTTCTACCTCAATCCGTCCGGTATA 22 8490397 0.699608806 5 19 149 0.875 1.322219295 0 0.090909091 0.166666667 22 3 0 21 2L:8490367-8490400 7 19 1035 FBgn0032047 48.33333333 4.033333333 6.113333333 0.393103448 4.710743802 3.107960742 0 -9 -4.5 0.01 dme-miR-932-5p 6mer3-8 GGAATT 2L 8512258 8512263 - 2L_8512258_8512263_- 0.591720877 0.591720866 0.591720872 0 CG13097 FBtr0079697 8512172 8512592 2L - 8512223 8512282 3'utr CG13097 FlyBase G9162.1 AGGCACGCGTGCAGCTTGCGGAATTTGACTATTCTTAGAATTATTTACTTAAAATAACTG 14 8512250 0.982134883 7 14 112 1 1.176091259 0.333333333 0.071428571 0.133333333 14 0 0 15 2L:8512223-8512282 6 CG13097 FBtr0079697 8512172 8512592 GGAATT 6mer3-8 dme-miR-932-5p 2L - 8512245 8512286 3'utr CG13097 FlyBase G7103.1 GATTAGGCACGCGTGCAGCTTGCGGAATTTGACTATTCTTAG 11 8512266 0.93218008 5 10 50 0.941176471 1.204119983 0.294117647 0.363636364 0.588235294 11 1 0 16 2L:8512245-8512286 6 11 1036 FBgn0032051 1042.693333 50.99 78.90333333 0.010549602 0.215728574 0.139411094 -13 3 -5 0.01 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2L 8525625 8525630 - 2L_8525625_8525630_- 0.857788843 0.972380777 0.91508481 0.08102878 lmgB FBtr0333420|FBtr0112744 8524997|8525551 8526861|8526861 2L - 8525604 8525647 3'utr lmgB FlyBase G9171.1 AAATCCACACGATCATATTTGACTGTTCTTTATTTCGTTATCAT 13 8525629 0.951911594 5 13 139 1 1.255272505 0.111111111 0.384615385 0.555555556 13 0 0 18 2L:8525604-8525647 6 lmgB FBtr0333420|FBtr0112744 8524997|8525551 8526861|8526861 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2L - 8525617 8525639 3'utr lmgB FlyBase G7107.1 ACGATCATATTTGACTGTTCTTT 9 8525628 0.73741131 3 8 86 0.916666667 0.740362689 0.583333333 0.222222222 0.416666667 9 0 1 11 2L:8525617-8525639 6 11 1037 FBgn0085470 298.48 19.26 29.45666667 0.036853391 0.57113188 0.373429897 -1 -2 -1.5 0.01 dme-miR-283-5p 7mer-m8 TGATATT 2L 8526651 8526657 - 2L_8526651_8526657_- 0.620203677 0.620203677 0.620203677 0 lmgB FBtr0112745|FBtr0333420|FBtr0112744|FBtr0336886 8526603|8524997|8525551|8526603 8526861|8526861|8526861|8526861 2L - 8526637 8526684 3'utr lmgB FlyBase G9173.1 ATAAAGCTTGCCATGGTCCCTCGTTCTTGATATTGAATCTCGAAACAT 9 8526651 0.98506544 4 9 68 1 1 0 0.111111111 0.2 9 0 0 10 2L:8526637-8526684 7 lmgB FBtr0112745|FBtr0333420|FBtr0112744|FBtr0336886 8526603|8524997|8525551|8526603 8526861|8526861|8526861|8526861 TGATATT 7mer-m8 dme-miR-283-5p 2L - 8526634 8526663 3'utr lmgB FlyBase G7110.1 CGTTCTTGATATTGAATCTCGAAACATATG 5 8526657 0.951963129 3 5 39 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 2L:8526634-8526663 7 6.5 1038 FBgn0085470 298.48 19.26 29.45666667 0.021777003 0.33748702 0.220663121 -6 0 -3 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 8537707 8537712 + 2L_8537707_8537712_+ 1 1 1 0 CG17834 FBtr0079689|FBtr0079688|FBtr0333418 8537596|8537596|8537596 8537932|8537932|8537932 2L + 8537691 8537743 3'utr CG17834 FlyBase G3214.1 GACCAATATCGCCAAAATGTGACTTAATATTATTAACTAATTAGCTGTAAGTG 12 8537708 0.907910897 5 12 97 1 1.146128036 0.214285714 0.166666667 0.285714286 12 0 0 14 2L:8537691-8537743 6 CG17834 FBtr0333418|FBtr0079688|FBtr0079689 8537596|8537596|8537596 8537932|8537932|8537932 ATGTGA 6mer3-8 dme-miR-1003-3p 2L + 8537695 8537728 3'utr CG17834 FlyBase G2539.1 AATATCGCCAAAATGTGACTTAATATTATTAACT 9 8537709 0.87117889 2 6 65 0.909090909 0.698970004 0.363636364 0.222222222 0.363636364 9 0 1 10 2L:8537695-8537728 6 8 1039 FBgn0028394 84 8.063333333 12.40666667 0.095238095 0.992145515 0.644814616 -1 -2 -1.5 0.01 dme-miR-276a-3p 6mer3-8 AGTTCC 2L 862082 862087 - 2L_862082_862087_- 0.994885891 0.995844166 0.995365029 0.00067762 aru FBtr0078032|FBtr0078031|FBtr0078033 861847|861847|861847 862165|862165|862165 2L - 861897 862161 3'utr aru FlyBase G6694.1 GAGATGCGATCACCATATACATATACACATATTCCGTAGTGAGGATCTAGCGTTATAGAGAGACAGACATCAGCAGTTCCGTCTAGGATGCTAGTCCTGGTCACTAGCGATCGGATTGGCTCCAATACCTTGCACTCGCTCGCAGGAGTGTGCAAACCAGAACTAACCTTAAGACTAACCTAAGTGGAGCTCCAGACGGGAGCTGTTGAGCAGCACGTGGCTCCTGCTGAGGCGGATGCTTAAGCTGATGCTCATCCAGGCGAAA 719 862085 0.982393128 32 703 5384 0.976771196 2.924795996 0.153310105 0.139082058 0.281068525 719 20 0 841 2L:861897-862161 6 aru FBtr0078031|FBtr0078033|FBtr0078032 861847|861847|861847 862165|862165|862165 AGTTCC 6mer3-8 dme-miR-276a-3p 2L - 862057 862137 3'utr aru FlyBase G5238.1 ACACATATTCCGTAGTGAGGATCTAGCGTTATAGAGAGACAGACATCAGCAGTTCCGTCTAGGATGCTAGTCCTGGTCACT 337 862085 0.984327967 9 322 2562 0.958333333 2.102090526 0.170454545 0.362017804 0.59280303 337 19 3 506 2L:862057-862137 6 491 1040 FBgn0029095 923.38 37.84 58.14666667 0.531742078 12.9756871 8.444164183 -2 -2 -2 0.01 dme-miR-14-3p 6mer2-7 AGACTG 2L 8668152 8668157 + 2L_8668152_8668157_+ 1 1 1 0 Sema-1a FBtr0303878|FBtr0303879|FBtr0329931|FBtr0303877|FBtr0329932 8666210|8664168|8664168|8666210|8666034 8672041|8670014|8671917|8671917|8670014 2L + 8668134 8668174 3'utr Sema-1a FlyBase G3219.1 ACATAGGGTTTGTATTATAGACTGGACGAACGGAGGGCAGA 9 8668149 0.992450258 3 4 49 0.454545455 0.698970004 0.454545455 0.111111111 0.272727273 9 6 0 5 2L:8668134-8668174 6 Sema-1a FBtr0303877|FBtr0329931|FBtr0303879|FBtr0303878|FBtr0329932 8666210|8664168|8664168|8666210|8666034 8671917|8671917|8670014|8672041|8670014 AGACTG 6mer2-7 dme-miR-14-3p 2L + 8668138 8668162 3'utr Sema-1a FlyBase G2545.1 AGGGTTTGTATTATAGACTGGACGA 5 8668149 0.729059413 2 4 32 0.857142857 0.77815125 0 0.2 0.428571429 5 1 0 6 2L:8668138-8668162 6 5.5 1041 FBgn0011259 295.3333333 4.256666667 6.55 0.018623025 1.292090838 0.839694656 3 3 3 0.01 dme-miR-12-5p 7mer-A1 ATACTCA 2L 8668261 8668267 + 2L_8668261_8668267_+ 0.823349562 0.823349562 0.823349562 0 Sema-1a FBtr0303878|FBtr0303879|FBtr0329931|FBtr0303877|FBtr0329932 8666210|8664168|8664168|8666210|8666034 8672041|8670014|8671917|8671917|8670014 2L + 8668202 8668285 3'utr Sema-1a FlyBase G3220.1 GGGGCATTGCTAATGTTGTTCTCATATTAAAGTATATTAGAAATAGGATAAGCTAATTGATACTCAATATTTTGTATGAGAAAC 22 8668259 0.990017337 5 21 208 0.96 1.380211242 0.12 0.090909091 0.2 22 1 0 24 2L:8668202-8668285 7 Sema-1a FBtr0303877|FBtr0329931|FBtr0303879|FBtr0303878|FBtr0329932 8666210|8664168|8664168|8666210|8666034 8671917|8671917|8670014|8672041|8670014 ATACTCA 7mer-A1 dme-miR-12-5p 2L + 8668202 8668282 3'utr Sema-1a FlyBase G2546.1 GGGGCATTGCTAATGTTGTTCTCATATTAAAGTATATTAGAAATAGGATAAGCTAATTGATACTCAATATTTTGTATGAGA 15 8668259 0.987158117 5 14 122 0.952380952 1.301029996 0.142857143 0.333333333 0.523809524 15 1 0 20 2L:8668202-8668282 7 16 1042 FBgn0011259 295.3333333 4.256666667 6.55 0.054176072 3.75880971 2.442748092 2 2 2 0.01 dme-bantam-3p 6mer2-7 GATCTC 2L 8684963 8684968 - 2L_8684963_8684968_- 1 1 1 0 PrBP FBtr0079750 8684821 8685347 2L - 8684946 8685017 3'utr PrBP FlyBase G9185.1 TAAAAATAGCTGCCGAACATTGTGTCATTTGAGATAAATTGTATCTATAGATCTCTGTACCAGTTGTAACCA 18 8684962 0.987377212 7 16 149 0.944444444 1.230448921 0.444444444 0 0 18 1 0 17 2L:8684946-8685017 6 PrBP FBtr0079750 8684821 8685347 GATCTC 6mer2-7 dme-bantam-3p 2L - 8684946 8684990 3'utr PrBP FlyBase G7119.1 TTTGAGATAAATTGTATCTATAGATCTCTGTACCAGTTGTAACCA 6 8684962 0.990315832 2 5 58 0.75 0.77815125 0.25 0.333333333 0.5 6 2 0 6 2L:8684946-8684990 6 11 1043 FBgn0032059 209.34 22.80333333 34.73333333 0.052546097 0.482385616 0.316698656 -6 -6 -6 0.01 dme-miR-33-5p 8mer-A1 CAATGCAA 2L 8685209 8685216 - 2L_8685209_8685216_- 0.634552077 0.631442777 0.632997427 0.002198607 PrBP FBtr0079750 8684821 8685347 2L - 8685151 8685320 3'utr PrBP FlyBase G9186.1 TGATCGACCAGGTGTTCTCGCGTCCACCCACAAGTTTTTTTGGTTGTTCTTCAAGATGTTCTCTACAAAACATGCATACTTCGCTTTTGAGTACTTCAGCATTTCAATGCAATTGTTTGCGCGTTTATGAACTAGTTGTAGTCCAATGCATTTTAATCTAATCTAATTTT 52 8685218 0.977960038 23 51 475 0.983606557 1.77815125 0.262295082 0.173076923 0.295081967 52 1 0 60 2L:8685151-8685320 8 PrBP FBtr0079750 8684821 8685347 CAATGCAA 8mer-A1 dme-miR-33-5p 2L - 8685163 8685289 3'utr PrBP FlyBase G7120.1 AAGTTTTTTTGGTTGTTCTTCAAGATGTTCTCTACAAAACATGCATACTTCGCTTTTGAGTACTTCAGCATTTCAATGCAATTGTTTGCGCGTTTATGAACTAGTTGTAGTCCAATGCATTTTAATC 36 8685217 0.812420349 14 34 338 0.96 1.681241237 0.14 0.305555556 0.5 36 2 0 48 2L:8685163-8685289 8 8.5 1044 FBgn0032059 209.34 22.80333333 34.73333333 0.040603802 0.372752522 0.244721689 2 1 1.5 0.01 dme-miR-307a-3p 6mer3-8 GGTTGT 2L 8685274 8685279 - 2L_8685274_8685279_- 1 1 1 0 PrBP FBtr0079750 8684821 8685347 2L - 8685151 8685320 3'utr PrBP FlyBase G9186.1 TGATCGACCAGGTGTTCTCGCGTCCACCCACAAGTTTTTTTGGTTGTTCTTCAAGATGTTCTCTACAAAACATGCATACTTCGCTTTTGAGTACTTCAGCATTTCAATGCAATTGTTTGCGCGTTTATGAACTAGTTGTAGTCCAATGCATTTTAATCTAATCTAATTTT 52 8685263 0.977960038 23 51 475 0.983606557 1.77815125 0.262295082 0.173076923 0.295081967 52 1 0 60 2L:8685151-8685320 6 PrBP FBtr0079750 8684821 8685347 GGTTGT 6mer3-8 dme-miR-307a-3p 2L - 8685163 8685289 3'utr PrBP FlyBase G7120.1 AAGTTTTTTTGGTTGTTCTTCAAGATGTTCTCTACAAAACATGCATACTTCGCTTTTGAGTACTTCAGCATTTCAATGCAATTGTTTGCGCGTTTATGAACTAGTTGTAGTCCAATGCATTTTAATC 36 8685280 0.812420349 14 34 338 0.96 1.681241237 0.14 0.305555556 0.5 36 2 0 48 2L:8685163-8685289 6 17 1045 FBgn0032059 209.34 22.80333333 34.73333333 0.081207605 0.745505043 0.489443378 -16 1 -7.5 0.01 dme-miR-970-3p 6mer2-7 CTTATG 2L 8710198 8710203 - 2L_8710198_8710203_- 1 1 1 0 raw FBtr0340231|FBtr0303868|FBtr0079746|FBtr0340232|FBtr0079745 8709878|8709878|8709878|8709878|8709878 8710434|8710434|8710434|8710434|8710434 2L - 8710156 8710253 3'utr raw FlyBase G9209.1 CAAGTGTAAAACCACTAAAATGTCGTCGCCCAGAGAGCGCATTTCATAACCTTATGGAGAAAGTCTTGCATTCAGCTCCACTCTCTCTATGATCGCTA 12 8710232 0.961323484 7 12 63 1 1.176091259 0.266666667 0.25 0.4 12 0 0 15 2L:8710156-8710253 6 raw FBtr0340232|FBtr0079745|FBtr0303868|FBtr0079746|FBtr0340231 8709878|8709878|8709878|8709878|8709878 8710434|8710434|8710434|8710434|8710434 CTTATG 6mer2-7 dme-miR-970-3p 2L - 8710185 8710243 3'utr raw FlyBase G7143.1 ACCACTAAAATGTCGTCGCCCAGAGAGCGCATTTCATAACCTTATGGAGAAAGTCTTGC 5 8710200 0.970116399 3 5 28 1 1.113943352 0 0.6 0.846153846 5 0 0 13 2L:8710185-8710243 6 3.5 1046 FBgn0003209 722.0533333 20.74666667 31.84333333 0.004847287 0.168701799 0.109913116 29 -3 13 0.01 dme-miR-276a-3p 6mer3-8 AGTTCC 2L 8710413 8710418 - 2L_8710413_8710418_- 1 1 1 0 raw FBtr0340231|FBtr0303868|FBtr0079746|FBtr0340232|FBtr0079745 8709878|8709878|8709878|8709878|8709878 8710434|8710434|8710434|8710434|8710434 2L - 8710398 8710458 stop_codon raw FlyBase G9211.1 TACAACAACCGCGACCGCTGCTAAATCGTACCTGTATTTAAGTTCCAGCACGTGACAATTT 70 8710423 0.985328005 10 65 537 0.933333333 1.84509804 0.293333333 0.057142857 0.12 70 5 0 70 2L:8710398-8710458 6 raw FBtr0340232|FBtr0079745|FBtr0303868|FBtr0079746|FBtr0340231 8709878|8709878|8709878|8709878|8709878 8710434|8710434|8710434|8710434|8710434 AGTTCC 6mer3-8 dme-miR-276a-3p 2L - 8710394 8710457 stop_codon raw FlyBase G7144.1 ACAACAACCGCGACCGCTGCTAAATCGTACCTGTATTTAAGTTCCAGCACGTGACAATTTAAGC 41 8710422 0.986824969 9 37 318 0.815384615 1.72427587 0.153846154 0.390243902 0.615384615 41 12 0 53 2L:8710394-8710457 6 8.5 1047 FBgn0003209 722.0533333 20.74666667 31.84333333 0.011771984 0.40970437 0.266931854 5 4 4.5 0.01 dme-miR-14-3p 7mer-m8 AAGACTG 2L 876828 876834 + 2L_876828_876834_+ 0.671795832 0.671795832 0.671795832 0 PNUTS FBtr0091489|FBtr0332000 876736|876736 877038|877038 2L + 876801 876854 3'utr PNUTS FlyBase G935.3 AGATTTCCGAAATCGAGTCCCCACATGAAGACTGTATCCAGGTTAGCCGCCGCA 328 876826 0.890271768 7 319 1537 0.9765625 2.096910013 0.111979167 0.131097561 0.2578125 328 7 2 375 2L:876801-876854 7 PNUTS FBtr0332000|FBtr0091489 876736|876736 877038|877038 AAGACTG 7mer-m8 dme-miR-14-3p 2L + 876736 876876 stop_codon PNUTS FlyBase G753.1 AGGACCTACCCGAATCTTCTGCGGAAGATTCAGCTGCATAGATCTCAGACGCGCAACGGAGGCCAAGATTTCCGAAATCGAGTCCCCACATGAAGACTGTATCCAGGTTAGCCGCCGCAAGTTAATCTAAGTGTATATATG 197 876826 0.960188933 16 181 895 0.932659933 1.965358514 0.131313131 0.355329949 0.572390572 197 18 2 277 2L:876736-876876 7 247.5 1048 FBgn0053526 1548.73 47.96666667 73.53 0.159808359 5.159833218 3.365973072 2 2 2 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 8829076 8829082 + 2L_8829076_8829082_+ 0.801970437 0.801970437 0.801970437 0 SoxN FBtr0330210|FBtr0330210|FBtr0330210|FBtr0079733|FBtr0079733|FBtr0079733 8828778|8828778|8828778|8828211|8828211|8828211 8829670|8829670|8829670|8829670|8829670|8829670 2L + 8828888 8829143 3'utr SoxN FlyBase G3269.1 TCGAATTTCGAAGTGGCAGAGTAACACATGCGCATATAAATAAATGAGAATAGGATTAATGTTTAGTCATTTAAATGATGCATACGCACTGTTGTACCACAATAGTAAGATGACAACTCACTTGCATTCCATACCGTTCTGCTTCGATTTCCCTTGATTTCCCGCTTGTTGCATAGCTAAAACAATTGTGTGATACAAATAAACTGTTGCCAATTACGGGGACAACGGCAACAACAACAAATTCGTTTGGTTTAGC 161 8829074 0.974663391 25 153 954 0.954773869 1.579783597 0.070351759 0.180124224 0.336683417 161 5 4 190 2L:8828888-8829143 7 SoxN FBtr0330210|FBtr0330210|FBtr0330210|FBtr0079733|FBtr0079733|FBtr0079733 8828778|8828778|8828778|8828211|8828211|8828211 8829670|8829670|8829670|8829670|8829670|8829670 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 8829032 8829122 3'utr SoxN FlyBase G2583.3 CGATTTCCCTTGATTTCCCGCTTGTTGCATAGCTAAAACAATTGTGTGATACAAATAAACTGTTGCCAATTACGGGGACAACGGCAACAAC 68 8829074 0.969964895 8 64 382 0.969072165 1.973127854 0.020618557 0.323529412 0.525773196 68 3 0 94 2L:8829032-8829122 7 84.5 1049 FBgn0029123 4.333333333 0.126666667 0.19 19.5 667.1052632 444.7368421 2 2 2 0.01 dme-miR-970-3p 7mer-m8 TCTTATG 2L 8829333 8829339 + 2L_8829333_8829339_+ 0.658999343 0.658999343 0.658999343 0 SoxN FBtr0330210|FBtr0079733 8828778|8828211 8829670|8829670 2L + 8829221 8829355 3'utr SoxN FlyBase G3271.1 GACGCGGAATCAAGCACAAGTTTAGTAGGAGTAAAGGCAGTTGTGGCGAGGCGATGAAAATATTTCAGAAAAGCAAAGAAAAATGTCAAAAAACATTCTATTTTATAAATTCTCTTATGCATTAAGTAATTATAA 42 8829335 0.990102542 11 40 382 0.943396226 1.698970004 0.245283019 0.238095238 0.396226415 42 3 0 50 2L:8829221-8829355 7 SoxN FBtr0330210|FBtr0079733 8828778|8828211 8829670|8829670 TCTTATG 7mer-m8 dme-miR-970-3p 2L + 8829315 8829349 3'utr SoxN FlyBase G2585.1 ATTCTATTTTATAAATTCTCTTATGCATTAAGTAA 24 8829335 0.757241616 3 24 249 1 1.544068044 0.314285714 0.333333333 0.542857143 24 0 0 35 2L:8829315-8829349 7 28 1050 FBgn0029123 4.333333333 0.126666667 0.19 6.461538462 221.0526316 147.3684211 -2 -2 -2 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA 2L 8829573 8829578 + 2L_8829573_8829578_+ 1 1 1 0 SoxN FBtr0330210|FBtr0079733 8828778|8828211 8829670|8829670 2L + 8829558 8829608 3'utr SoxN FlyBase G3274.1 AAACCAAGAAGCAGCGTGCAAACGTGATTGTGAAACATGGCGCAAGGCAGC 125 8829585 0.933097586 6 123 519 0.987341772 1.716003344 0.436708861 0.176 0.348101266 125 0 2 156 2L:8829558-8829608 6 SoxN FBtr0330210|FBtr0079733 8828778|8828211 8829670|8829670 GTGCAA 6mer3-8 dme-miR-92b-3p 2L + 8829563 8829608 3'utr SoxN FlyBase G2587.1 AAGAAGCAGCGTGCAAACGTGATTGTGAAACATGGCGCAAGGCAGC 95 8829585 0.693413189 4 95 398 1 2.173186268 0.416107383 0.421052632 0.630872483 95 0 0 149 2L:8829563-8829608 6 107 1051 FBgn0029123 4.333333333 0.126666667 0.19 24.69230769 844.7368421 563.1578947 -12 -12 -12 0.01 dme-miR-965-3p 6mer2-7 ACGCTT 2L 8933405 8933410 + 2L_8933405_8933410_+ 1 1 1 0 CG34398 FBtr0303889|FBtr0112649 8933083|8933083 8933594|8933537 2L + 8933393 8933429 3'utr CG34398 FlyBase G3279.1 AAATGGAAACACACGCTTTGGCATTGCACTCGAAATT 9 8933412 0.674167385 3 7 43 0.833333333 1 0 0.333333333 0.5 9 2 0 10 2L:8933393-8933429 6 CG34398 FBtr0303889|FBtr0112649 8933083|8933083 8933594|8933537 ACGCTT 6mer2-7 dme-miR-965-3p 2L + 8933393 8933425 3'utr CG34398 FlyBase G2591.1 AAATGGAAACACACGCTTTGGCATTGCACTCGA 10 8933411 0.63869363 4 10 45 1 1.230448921 0.352941176 0.3 0.588235294 10 0 0 17 2L:8933393-8933425 6 8.5 1052 FBgn0085427 21 0.376666667 0.593333333 0.404761905 22.56637168 14.3258427 -7 -6 -6.5 0.01 dme-miR-282-5p 8mer-A1 AGAGGCTA 2L 8942229 8942236 - 2L_8942229_8942236_- 0.63790686 0.63790686 0.63790686 0 CG9515 FBtr0079791|FBtr0340262 8942108|8941943 8942304|8942304 2L - 8942214 8942260 3'utr CG9515 FlyBase G9232.1 GAGGTTTATGCGGCAACAAGCGTCAGAGGCTACACACACTCCAGCGA 13 8942252 0.942080001 4 13 51 1 1.176091259 0.8 0.153846154 0.266666667 13 0 0 15 2L:8942214-8942260 8 CG9515 FBtr0079791|FBtr0340262 8942108|8941943 8942304|8942304 AGAGGCTA 8mer-A1 dme-miR-282-5p 2L - 8942186 8942258 3'utr CG9515 FlyBase G7156.1 GGTTTATGCGGCAACAAGCGTCAGAGGCTACACACACTCCAGCGATTTTAATCTTGGTTGATAAGCGGCTATA 12 8942238 0.956359828 5 8 43 0.684210526 0.812913357 0.368421053 0.5 0.684210526 12 5 1 13 2L:8942186-8942258 8 12 1053 FBgn0032077 238.47 34.31666667 52.73333333 0.050320795 0.349684313 0.227560051 16 2 9 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 8953627 8953632 - 2L_8953627_8953632_- 1 1 1 0 CG31886 FBtr0079787|FBtr0113029|FBtr0303885 8953479|8953479|8953479 8954021|8954021|8954021 2L - 8953513 8953806 3'utr CG31886 FlyBase G9261.1 GAATGTAGCCTAAGACGCAAGCATTTTTTGGTCTACAAATGAAAATGGGAAAATAGTAAGATAAAATATGTAAATTGTATATCGTGTACAAATAAATGTAGATACCAAGTAATTTTAAGATGAAATTGTAGTACTTATCAATTAATTCAATTATTCTCATTTTATAAACGACTTTGATCTTTTTGTTTACCTGAACACATTTTAAAGACAATTCTTATGTAGTCATTTGAAGAGGATTAGTTTTAATGCTTTTGTTGACTTTGTATAAGTGATTTGAATTTTAAGGAAATTTTC 969 8953624 0.831691 75 931 9074 0.963288109 1.905616011 0.106145251 0.226006192 0.401436552 969 32 14 1207 2L:8953513-8953806 6 CG31886 FBtr0303885|FBtr0113029|FBtr0079787 8953479|8953479|8953479 8954021|8954021|8954021 TGATCT 6mer3-8 dme-bantam-3p 2L - 8953513 8953805 3'utr CG31886 FlyBase G7179.1 AATGTAGCCTAAGACGCAAGCATTTTTTGGTCTACAAATGAAAATGGGAAAATAGTAAGATAAAATATGTAAATTGTATATCGTGTACAAATAAATGTAGATACCAAGTAATTTTAAGATGAAATTGTAGTACTTATCAATTAATTCAATTATTCTCATTTTATAAACGACTTTGATCTTTTTGTTTACCTGAACACATTTTAAAGACAATTCTTATGTAGTCATTTGAAGAGGATTAGTTTTAATGCTTTTGTTGACTTTGTATAAGTGATTTGAATTTTAAGGAAATTTTC 741 8953623 0.817424036 78 711 7034 0.960637301 1.96933118 0.11715089 0.326585695 0.532333646 741 32 10 1025 2L:8953513-8953805 6 526 1054 FBgn0032079 1123.893333 53.47 82.11333333 0.468015945 9.837291939 6.405780628 -8 -9 -8.5 0.01 dme-miR-190-5p 6mer2-7 CATATC 2L 8953877 8953882 - 2L_8953877_8953882_- 1 1 1 0 CG31886 FBtr0079787|FBtr0113029|FBtr0303885 8953479|8953479|8953479 8954021|8954021|8954021 2L - 8953817 8954242 stop_codon CG31886 FlyBase G9262.1 TGAGCGAGTCACAAAGCTGTCTGAATACCACAAATTGCACATTCAACATCAGTTTCCTTTCGGATGAGATTGTGGTGGTGGAGGTTCCAACACGGGATGGTATCGAGCACGAGGAGGACGATATAACCAATCTGATCTCCACCTGTCATCCGCGCAGCGAGATATACGCCATCTTTCCCATTACGGTGCTGGTGCTGATCCTTTGCTGCTCCTTCCTGTAGTCCTCCTGATCCAATATTATTAATATACTATTGTGATATTTATGGTGAGGTAACTACCGGGTGATATACTCGCTTGTGAGTGTGTTAACGTTATGGCCGGCCCCAAAACGAGAGCTTTTAAAATAGCCATAGAATATTCCATATCGGTTATACACACACGGAATGAACAGTCTGAACAAATCGTTATCAATATTCGTAGATTTTA 1821 8953871 0.91527203 90 1600 12129 0.883221477 1.181403796 0.13064877 0.190005491 0.340044743 1821 132 129 1974 2L:8953817-8954242 6 CG31886 FBtr0303885|FBtr0113029|FBtr0079787 8953479|8953479|8953479 8954021|8954021|8954021 CATATC 6mer2-7 dme-miR-190-5p 2L - 8953820 8954077 stop_codon CG31886 FlyBase G7180.1 ACGCCATCTTTCCCATTACGGTGCTGGTGCTGATCCTTTGCTGCTCCTTCCTGTAGTCCTCCTGATCCAATATTATTAATATACTATTGTGATATTTATGGTGAGGTAACTACCGGGTGATATACTCGCTTGTGAGTGTGTTAACGTTATGGCCGGCCCCAAAACGAGAGCTTTTAAAATAGCCATAGAATATTCCATATCGGTTATACACACACGGAATGAACAGTCTGAACAAATCGTTATCAATATTCGTAGATT 1327 8953871 0.918283761 55 1155 8475 0.878654971 1.301753217 0.153021442 0.39412208 0.608187135 1327 160 89 1803 2L:8953820-8954077 6 374.5 1055 FBgn0032079 1123.893333 53.47 82.11333333 0.333216675 7.003927436 4.560769668 -11 -11 -11 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 2L 8970040 8970046 + 2L_8970040_8970046_+ 0.782911698 0.643590004 0.713250851 0.098515319 CG18088 FBtr0332187|FBtr0079759 8970025|8970025 8970627|8970259 2L + 8970028 8970072 3'utr CG18088 FlyBase G3294.1 TAAGTCTCTTATGTACAAAATAAAGTTTAAGTTTAGTTTAAAACT 48 8970038 0.679852743 7 43 378 0.893939394 1.16879202 0.045454545 0.3125 0.5 48 4 3 59 2L:8970028-8970072 7 CG18088 FBtr0079759|FBtr0332187 8970025|8970025 8970259|8970627 GTACAAA 7mer-A1 dme-miR-305-5p 2L + 8970029 8970060 3'utr CG18088 FlyBase G2604.1 AAGTCTCTTATGTACAAAATAAAGTTTAAGTT 14 8970037 0.657229584 3 12 100 0.857142857 0.77815125 0.19047619 0.428571429 0.619047619 14 1 2 18 2L:8970029-8970060 7 30.5 1056 FBgn0032082 216 12.59666667 19.19 0.141203704 2.42127547 1.589369463 2 3 2.5 0.01 dme-miR-8-3p 6mer2-7 AGTATT 2L 8977904 8977909 - 2L_8977904_8977909_- 1 1 1 0 CG13101 FBtr0079784 8977832 8978041 2L - 8977855 8977924 3'utr CG13101 FlyBase G9274.1 AAATTCGTTCTGCGGAGTATTGTTGCTTAACGGCATTTGAAGGTAAAACCCGGTCTATGTCCTTCGGCGG 12 8977904 0.988786317 7 12 110 1 1.113943352 0.153846154 0.083333333 0.153846154 12 0 0 13 2L:8977855-8977924 6 CG13101 FBtr0079784 8977832 8978041 AGTATT 6mer2-7 dme-miR-8-3p 2L - 8977857 8977924 3'utr CG13101 FlyBase G7194.1 AAATTCGTTCTGCGGAGTATTGTTGCTTAACGGCATTTGAAGGTAAAACCCGGTCTATGTCCTTCGGC 9 8977903 0.987188654 7 9 79 1 1.176091259 0.066666667 0.333333333 0.6 9 0 0 15 2L:8977857-8977924 6 8 1057 FBgn0032084 10 0.853333333 1.306666667 0.8 9.375 6.12244898 -5 -6 -5.5 0.01 dme-miR-932-5p 7mer-m8 GGAATTG 2L 8986006 8986012 - 2L_8986006_8986012_- 0.70297287 0.70297287 0.70297287 0 rost FBtr0079782|FBtr0331454|FBtr0331453 8985934|8985934|8985934 8986340|8986340|8986340 2L - 8985971 8986023 3'utr rost FlyBase G9283.1 AAAAGAATAATGGAATTGTATTAAAATATATCACGAATATCAAAAGTGGAAAG 11 8986013 0.985048824 3 10 80 0.916666667 1.041392685 0.166666667 0.090909091 0.166666667 11 1 0 11 2L:8985971-8986023 7 rost FBtr0079782|FBtr0331454|FBtr0331453 8985934|8985934|8985934 8986340|8986340|8986340 GGAATTG 7mer-m8 dme-miR-932-5p 2L - 8985978 8986023 3'utr rost FlyBase G7201.1 AAAAGAATAATGGAATTGTATTAAAATATATCACGAATATCAAAAG 11 8986013 0.984349602 3 9 69 0.875 1.146128036 0.0625 0.272727273 0.5 11 2 0 14 2L:8985978-8986023 7 9 1058 FBgn0011705 1154.336667 95.13666667 145.5366667 0.007796686 0.09460075 0.061840086 1 1 1 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT 2L 8986140 8986145 - 2L_8986140_8986145_- 1 1 1 0 rost FBtr0079782|FBtr0331454|FBtr0331453 8985934|8985934|8985934 8986340|8986340|8986340 2L - 8986035 8986328 3'utr rost FlyBase G9284.1 AACAAAAAGTCATTGAATATCACCTCATGGGCACCCGCACGTATACCATGTTCTTATATGCATTGCCAGCATTATGTAACTCCCATTAACAAATCCATCCAAAAACGACACTGAAAAGGGAGTCGCACACTTGCATGCATTTATTTATATCTAGTATTTCATATTGTAAGTTTTAATCATTTGGTTCCTTAACATTGAATTGGTTTAGTTAGGTTAATTCTTATACATTATGTTGTTATTACATATTTGGTTTAAATAGTATAAATATGAAATTTGTTGAAAATACTCTACCCA 154 8986147 0.985070251 38 140 1141 0.91160221 1.916453949 0.116022099 0.149350649 0.276243094 154 15 1 165 2L:8986035-8986328 6 rost FBtr0079782|FBtr0331454|FBtr0331453 8985934|8985934|8985934 8986340|8986340|8986340 GTTCCT 6mer2-7 dme-miR-276a-3p 2L - 8986108 8986166 3'utr rost FlyBase G7202.1 ATTGTAAGTTTTAATCATTTGGTTCCTTAACATTGAATTGGTTTAGTTAGGTTAATTCT 23 8986147 0.982498722 5 18 216 0.891891892 1.51851394 0 0.545454545 0.72972973 22 4 0 33 2L:8986108-8986166 6 27 1059 FBgn0011705 1154.336667 95.13666667 145.5366667 0.023390057 0.283802249 0.185520258 2 2 2 0.01 dme-miR-980-5p 6mer2-7 AAAAAC 2L 8986223 8986228 - 2L_8986223_8986228_- 0.999999989 1 0.999999995 0 rost FBtr0079782|FBtr0331454|FBtr0331453 8985934|8985934|8985934 8986340|8986340|8986340 2L - 8986035 8986328 3'utr rost FlyBase G9284.1 AACAAAAAGTCATTGAATATCACCTCATGGGCACCCGCACGTATACCATGTTCTTATATGCATTGCCAGCATTATGTAACTCCCATTAACAAATCCATCCAAAAACGACACTGAAAAGGGAGTCGCACACTTGCATGCATTTATTTATATCTAGTATTTCATATTGTAAGTTTTAATCATTTGGTTCCTTAACATTGAATTGGTTTAGTTAGGTTAATTCTTATACATTATGTTGTTATTACATATTTGGTTTAAATAGTATAAATATGAAATTTGTTGAAAATACTCTACCCA 154 8986243 0.985070251 38 140 1141 0.91160221 1.916453949 0.116022099 0.149350649 0.276243094 154 15 1 165 2L:8986035-8986328 6 rost FBtr0079782|FBtr0331454|FBtr0331453 8985934|8985934|8985934 8986340|8986340|8986340 AAAAAC 6mer2-7 dme-miR-980-5p 2L - 8986173 8986326 3'utr rost FlyBase G7202.2 CAAAAAGTCATTGAATATCACCTCATGGGCACCCGCACGTATACCATGTTCTTATATGCATTGCCAGCATTATGTAACTCCCATTAACAAATCCATCCAAAAACGACACTGAAAAGGGAGTCGCACACTTGCATGCATTTATTTATATCTAGTA 65 8986243 0.956647018 18 58 361 0.897959184 1.643452676 0.010204082 0.353846154 0.571428571 65 9 1 88 2L:8986173-8986326 6 36.5 1060 FBgn0011705 1154.336667 95.13666667 145.5366667 0.031619891 0.383658596 0.250795905 15 15 15 0.01 dme-miR-79-3p 7mer-A1 AGCTTTA 2L 9163658 9163664 + 2L_9163658_9163664_+ 0.823349562 0.823349562 0.823349562 0 CG32982 FBtr0110960|FBtr0301039|FBtr0330218|FBtr0079771|FBtr0303888|FBtr0301040|FBtr0330219 9163162|9163162|9163463|9163448|9163448|9163162|9163448 9163721|9163721|9163721|9163716|9163721|9163721|9163721 2L + 9163627 9163663 3'utr CG32982 FlyBase G3309.1 TAGTACTCGTAGTGTGTGTGCTCCAATGTCCAGCTTT 14 9163645 0.690710413 5 13 99 0.933333333 0.84509804 0.066666667 0.071428571 0.133333333 14 0 1 14 2L:9163627-9163663 6 CG32982 FBtr0079771|FBtr0330218|FBtr0301039|FBtr0110960|FBtr0330219|FBtr0301040|FBtr0303888 9163448|9163463|9163162|9163162|9163448|9163162|9163448 9163716|9163721|9163721|9163721|9163721|9163721|9163721 AGCTTTA 7mer-A1 dme-miR-79-3p 2L + 9163617 9163679 3'utr CG32982 FlyBase G2609.1 AACTATGTAGTAGTACTCGTAGTGTGTGTGCTCCAATGTCCAGCTTTATGTAAATGTTTAAAT 13 9163644 0.977906816 6 12 115 0.947368421 1.255272505 0.052631579 0.384615385 0.578947368 13 1 0 18 2L:9163617-9163679 7 6.5 1061 FBgn0052982 930.23 36.84 56.35333333 0.006987519 0.176438654 0.115343665 13 14 13.5 0.01 dme-miR-2b-2-5p 7mer-m8 TTGAAGA 2L 9165480 9165486 - 2L_9165480_9165486_- 0.631525999 0.631525999 0.631525999 0 CG9586 FBtr0330220|FBtr0079774 9165419|9165419 9165599|9165599 2L - 9165441 9165482 3'utr CG9586 FlyBase G9296.1 AGAGATCTACCGAACTGTTGAATATAAATGTATTAAAATTGA 5 9165465 0.950690834 4 5 23 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2L:9165441-9165482 3 CG9586 FBtr0330220|FBtr0079774 9165419|9165419 9165599|9165599 TTGAAGA 7mer-m8 dme-miR-2b-2-5p 2L - 9165442 9165482 3'utr CG9586 FlyBase G7211.1 AGAGATCTACCGAACTGTTGAATATAAATGTATTAAAATTG 7 9165465 0.962585481 5 7 35 1 1.176091259 0.2 0.714285714 0.866666667 7 0 0 15 2L:9165442-9165482 3 5 1062 FBgn0032101 356 48.28333333 74.56666667 0.014044944 0.103555402 0.06705409 -21 -21 -21 0.01 dme-miR-31a-5p 6mer3-8 TCTTGC 2L 9245858 9245863 + 2L_9245858_9245863_+ 0.971275849 0.848117033 0.909696441 0.087086423 tai FBtr0333405|FBtr0303872|FBtr0303871|FBtr0303873|FBtr0304974|FBtr0303870 9245807|9245807|9245807|9245807|9245807|9245807 9247186|9247186|9247186|9250211|9250211|9247186 2L + 9245819 9245897 3'utr tai FlyBase G3332.1 CCTAGTTCAGAACCAAGGATCACGTACAACCAAAACTTCTCTTGCGCACGCATTTATGGCTCTAGATACGAAAAACAAT 26 9245874 0.975721882 12 25 157 0.96969697 1.204119983 0.060606061 0.115384615 0.303030303 26 0 1 32 2L:9245819-9245897 6 tai FBtr0304974|FBtr0303870|FBtr0303871|FBtr0303873|FBtr0333405|FBtr0303872 9245807|9245807|9245807|9245807|9245807|9245807 9250211|9247186|9247186|9250211|9247186|9247186 TCTTGC 6mer3-8 dme-miR-31a-5p 2L + 9245832 9245885 3'utr tai FlyBase G2628.1 CAAGGATCACGTACAACCAAAACTTCTCTTGCGCACGCATTTATGGCTCTAGAT 12 9245860 0.970394221 6 12 70 1 1.255272505 0.222222222 0.333333333 0.555555556 12 0 0 18 2L:9245832-9245885 6 14.5 1063 FBgn0041092 2562.806667 37.60666667 57.55666667 0.005657859 0.385569934 0.251925639 -16 -2 -9 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 9246846 9246851 + 2L_9246846_9246851_+ 1 1 1 0 tai FBtr0333405|FBtr0303872|FBtr0303871|FBtr0303873|FBtr0304974|FBtr0303870 9245807|9245807|9245807|9245807|9245807|9245807 9247186|9247186|9247186|9250211|9250211|9247186 2L + 9246808 9246874 3'utr tai FlyBase G3340.1 AAGCAAAGCGCGCAAAGCAAAGTTGGCGTTGCAATTTCATGTGAAGGCTATTTTACAGGTTTTGTTT 94 9246849 0.988618154 11 92 856 0.974358974 1.579783597 0.051282051 0.180851064 0.341880342 94 1 2 114 2L:9246808-9246874 6 tai FBtr0304974|FBtr0303870|FBtr0303871|FBtr0303873|FBtr0333405|FBtr0303872 9245807|9245807|9245807|9245807|9245807|9245807 9250211|9247186|9247186|9250211|9247186|9247186 ATGTGA 6mer3-8 dme-miR-1003-3p 2L + 9246822 9246871 3'utr tai FlyBase G2635.1 AAGCAAAGTTGGCGTTGCAATTTCATGTGAAGGCTATTTTACAGGTTTTG 47 9246849 0.843664743 7 47 435 1 1.832508913 0.073529412 0.340425532 0.544117647 47 0 0 68 2L:9246822-9246871 6 68 1064 FBgn0041092 2562.806667 37.60666667 57.55666667 0.02653341 1.808190037 1.181444374 -3 -3 -3 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2L 9331904 9331909 + 2L_9331904_9331909_+ 0.998552132 0.999998541 0.999275337 0.001022759 Cks30A FBtr0079799|FBtr0079799|FBtr0079799 9331350|9331350|9331350 9331981|9331981|9331981 2L + 9331816 9331928 3'utr Cks30A FlyBase G3348.1 ATTTTATCATACTTTATGTTGCCATTTCGAAACGGAAGCGAAAAGAAGAATTTTGCTCACTTCTTTTAAGCTTAAATGAAATCTGATTTGTGATCTTGAAATTTTTAATCAAT 198 9331902 0.89813824 16 190 1752 0.965779468 1.705863712 0.326996198 0.247474747 0.433460076 198 5 4 254 2L:9331816-9331928 6 Cks30A FBtr0079799|FBtr0079799|FBtr0079799 9331350|9331350|9331350 9331981|9331981|9331981 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 9331880 9331925 3'utr Cks30A FlyBase G2643.1 TTTAAGCTTAAATGAAATCTGATTTGTGATCTTGAAATTTTTAATC 140 9331902 0.68933827 7 135 1233 0.961722488 2.303196057 0.320574163 0.35 0.564593301 140 8 0 201 2L:9331880-9331925 6 162 1065 FBgn0010314 382.0366667 41.23 63.10666667 0.424043067 3.929177783 2.567082189 2 2 2 0.01 dme-miR-252-5p 6mer3-8 GTACTT 2L 9435065 9435070 + 2L_9435065_9435070_+ 1 1 1 0 scat FBtr0079809 9434914 9435341 2L + 9435059 9435124 3'utr scat FlyBase G3370.1 TTGCTTGTACTTTTATGTTCCGCCCTATAGCAAAAGGAAATTGGAAATGTATCTCTTTTGTTGCGC 158 9435076 0.826056999 9 155 1365 0.984293194 2.274157849 0.32460733 0.202531646 0.340314136 158 3 0 188 2L:9435059-9435124 6 scat FBtr0079809 9434914 9435341 GTACTT 6mer3-8 dme-miR-252-5p 2L + 9435059 9435123 3'utr scat FlyBase G2668.1 TTGCTTGTACTTTTATGTTCCGCCCTATAGCAAAAGGAAATTGGAAATGTATCTCTTTTGTTGCG 89 9435076 0.767710828 11 85 790 0.968 2.08278537 0.288 0.303370787 0.504 89 4 0 121 2L:9435059-9435123 6 83.5 1066 FBgn0011232 207.99 7.106666667 10.93333333 0.401461609 11.74953096 7.637195122 -11 -11 -11 0.01 dme-miR-970-3p 7mer-A1 CTTATGA 2L 9435161 9435167 + 2L_9435161_9435167_+ 0.823349562 0.823349562 0.823349562 0 scat FBtr0079809 9434914 9435341 2L + 9435140 9435171 3'utr scat FlyBase G3371.1 AAGCTTAAAGTCGATGGAAGGCTTATGATTAA 14 9435154 0.915402481 3 14 91 1 1.146128036 0.142857143 0 0 14 0 0 14 2L:9435140-9435171 7 scat FBtr0079809 9434914 9435341 CTTATGA 7mer-A1 dme-miR-970-3p 2L + 9435140 9435172 3'utr scat FlyBase G2669.1 AAGCTTAAAGTCGATGGAAGGCTTATGATTAAA 13 9435154 0.912953137 3 13 85 1 1.230448921 0.235294118 0.153846154 0.352941176 13 0 0 17 2L:9435140-9435172 7 13.5 1067 FBgn0011232 207.99 7.106666667 10.93333333 0.064906967 1.899624765 1.234756098 7 7 7 0.01 dme-miR-8-3p 7mer-A1 AGTATTA 2L 9435242 9435248 + 2L_9435242_9435248_+ 0.822531528 0.823349562 0.822940545 0.000578484 scat FBtr0079809 9434914 9435341 2L + 9435200 9435266 3'utr scat FlyBase G3372.1 TGCGTACAAATCAATGGCGGTAAACGATTCCCTTGTTCCTTTAGTATTATTATCGTTAGCTGGATTT 46 9435240 0.92517206 10 46 453 1 1.73239376 0.314814815 0.173913043 0.296296296 46 0 0 54 2L:9435200-9435266 7 scat FBtr0079809 9434914 9435341 AGTATTA 7mer-A1 dme-miR-8-3p 2L + 9435183 9435261 3'utr scat FlyBase G2670.1 TAATCAACAAATTTCAATGCGTACAAATCAATGGCGGTAAACGATTCCCTTGTTCCTTTAGTATTATTATCGTTAGCTG 27 9435240 0.989730428 8 26 253 1 1.653212514 0.244444444 0.555555556 0.733333333 27 0 0 45 2L:9435183-9435261 7 30 1068 FBgn0011232 207.99 7.106666667 10.93333333 0.144237704 4.221388368 2.743902439 2 2 2 0.01 dme-miR-1002-5p 6mer3-8 CTACTT 2L 9462896 9462901 + 2L_9462896_9462901_+ 0.999588515 0.999980655 0.999784585 0.000277327 numb FBtr0339526|FBtr0079821|FBtr0079822 9462277|9462277|9462277 9464184|9463123|9463123 2L + 9462838 9462928 3'utr numb FlyBase G3378.1 ATGGCACCCTCTAAGCTTAAATGCAAACTCTGTATTATACTTTGGTAATGCCCTTCCACTACTTGTTGATTGATCCCACTAAGAATAATGA 27 9462907 0.986269655 8 26 218 0.96969697 1.505149978 0.363636364 0.222222222 0.363636364 27 1 0 32 2L:9462838-9462928 6 numb FBtr0339526|FBtr0079821|FBtr0079822 9462277|9462277|9462277 9464184|9463123|9463123 CTACTT 6mer3-8 dme-miR-1002-5p 2L + 9462895 9462930 3'utr numb FlyBase G2675.1 ACTACTTGTTGATTGATCCCACTAAGAATAATGATT 7 9462907 0.700881891 2 7 54 1 1.113943352 0.076923077 0.428571429 0.692307692 7 0 0 13 2L:9462895-9462930 6 8 1069 FBgn0002973 53 1.883333333 2.82 0.150943396 4.247787611 2.836879433 -11 -11 -11 0.01 dme-miR-965-3p 7mer-m8 TACGCTT 2L 9491617 9491623 - 2L_9491617_9491623_- 0.620204855 0.620204855 0.620204855 0 Gdi FBtr0306169|FBtr0345433 9491174|9491174 9492083|9492083 2L - 9491590 9491638 3'utr Gdi FlyBase G9312.1 AGTCAGTCAGACGATTACGCTTGGACTTTAGTTGTACGAGTATATAATA 47 9491624 0.887719025 6 46 352 0.980769231 1.40654018 0.057692308 0.106382979 0.192307692 47 0 1 51 2L:9491590-9491638 7 Gdi FBtr0345433|FBtr0306169 9491174|9491174 9492083|9492083 TACGCTT 7mer-m8 dme-miR-965-3p 2L - 9491598 9491636 3'utr Gdi FlyBase G7222.1 TCAGTCAGACGATTACGCTTGGACTTTAGTTGTACGAGT 28 9491624 0.889160597 4 28 217 1 1.612783857 0.073170732 0.392857143 0.585365854 28 0 0 41 2L:9491598-9491636 7 37 1070 FBgn0004868 1474.943333 78.36666667 119.7266667 0.02508571 0.472139515 0.309037252 1 1 1 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 2L 9492048 9492054 - 2L_9492048_9492054_- 0.603797897 0.62018505 0.611991474 0.0115875 Gdi FBtr0306169|FBtr0345433|FBtr0079862 9491174|9491174|9491934 9492083|9492083|9492083 2L - 9491957 9492073 3'utr Gdi FlyBase G9313.1 AGGCCTCATCTGGTTATGGTGCATTTGGACAGCTCAACATCAGCCACAAACATCGTAGATCGTCTCAGCGTCGTGGCCAAACCTTAAAAAAAAAAATACCCAAGATAAGAAAACCCA 48 9492049 0.98541852 13 48 228 1 1.72427587 0.113207547 0.104166667 0.188679245 48 0 0 53 2L:9491957-9492073 7 Gdi FBtr0345433|FBtr0079862|FBtr0306169 9491174|9491934|9491174 9492083|9492083|9492083 TGCATTT 7mer-m8 dme-miR-277-3p 2L - 9492036 9492096 stop_codon Gdi FlyBase G7224.1 CGAGGAGCAGTAAACGGGAATGAAGGCCTCATCTGGTTATGGTGCATTTGGACAGCTCAAC 9 9492054 0.974722863 5 8 51 1 1.204119983 0.3125 0.555555556 0.75 9 0 0 16 2L:9492036-9492096 7 18.5 1071 FBgn0004868 1474.943333 78.36666667 119.7266667 0.012542855 0.236069758 0.154518626 -5 0 -2.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 2L 9519762 9519768 + 2L_9519762_9519768_+ 0.823349562 0.823349562 0.823349562 0 CG33298 FBtr0089854|FBtr0301065|FBtr0301064 9519753|9519753|9519753 9520696|9520696|9520696 2L + 9519743 9519815 stop_codon CG33298 FlyBase G3404.1 ATCAGATTATAACAACGATTACCTGATTAAGCGCCAAAATGCAATTCTTCGGCTATCTCAGCGGCAACTAAAA 59 9519769 0.653021631 10 56 306 0.957746479 1.531478917 0.112676056 0.152542373 0.295774648 59 2 1 68 2L:9519743-9519815 7 CG33298 FBtr0301064|FBtr0301065|FBtr0089854 9519753|9519753|9519753 9520696|9520696|9520696 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2L + 9519726 9519808 stop_codon CG33298 FlyBase G2690.1 CGATTATGGGTCTAAGAATCAGATTATAACAACGATTACCTGATTAAGCGCCAAAATGCAATTCTTCGGCTATCTCAGCGGCA 35 9519769 0.967301194 6 32 174 0.903846154 1.672097858 0.134615385 0.4 0.596153846 35 5 0 47 2L:9519726-9519808 7 39.5 1072 FBgn0032120 1173.196667 22.66 34.66333333 0.033668694 1.743159753 1.139532647 -7 -7 -7 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 2L 9519853 9519858 + 2L_9519853_9519858_+ 0.679152755 1 0.839576377 0.226873231 CG33298 FBtr0089854|FBtr0301065|FBtr0089853|FBtr0301064 9519753|9519753|9519767|9519753 9520696|9520696|9520696|9520696 2L + 9519829 9519904 3'utr CG33298 FlyBase G3405.1 TAGCAACCCCCAAAACTTGTACACATGTGCTTTCGCTCTTAATATGTGGCCTTCGACACCGATTATTGATAATATT 20 9519878 0.983592534 8 19 151 1 1.431363764 0.111111111 0.25 0.444444444 20 0 0 27 2L:9519829-9519904 6 CG33298 FBtr0301064|FBtr0089853|FBtr0301065|FBtr0089854 9519753|9519767|9519753|9519753 9520696|9520696|9520696|9520696 ATGTGC 6mer3-8 dme-miR-305-3p 2L + 9519842 9519903 3'utr CG33298 FlyBase G2691.1 AACTTGTACACATGTGCTTTCGCTCTTAATATGTGGCCTTCGACACCGATTATTGATAATAT 23 9519881 0.72833523 12 23 169 1 1.568201724 0 0.434782609 0.648648649 23 0 0 37 2L:9519842-9519903 6 8.5 1073 FBgn0032120 1173.196667 22.66 34.66333333 0.007245162 0.375110327 0.245215886 -25 -28 -26.5 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 2L 9520019 9520024 + 2L_9520019_9520024_+ 1 1 1 0 CG33298 FBtr0089854|FBtr0301065|FBtr0089853|FBtr0301064 9519753|9519753|9519767|9519753 9520696|9520696|9520696|9520696 2L + 9520012 9520053 3'utr CG33298 FlyBase G3406.1 GAATATTAGTTAAACTGTTTGCCTTAACACTAGAATGAAAGC 19 9520035 0.787088456 4 17 146 0.916666667 1.041392685 0.125 0.157894737 0.333333333 19 1 1 22 2L:9520012-9520053 6 CG33298 FBtr0301064|FBtr0089853|FBtr0301065|FBtr0089854 9519753|9519767|9519753|9519753 9520696|9520696|9520696|9520696 AGTTAA 6mer3-8 dme-miR-999-3p 2L + 9519983 9520043 3'utr CG33298 FlyBase G2692.1 AAGCGCTTAGATTTCCGAGTTATCTATCTGAATATTAGTTAAACTGTTTGCCTTAACACTA 13 9520035 0.945248742 6 12 107 0.944444444 0.929418926 0 0.230769231 0.444444444 13 0 1 17 2L:9519983-9520043 6 12 1074 FBgn0032120 1173.196667 22.66 34.66333333 0.010228464 0.52956752 0.346187133 -16 -16 -16 0.01 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 9520288 9520294 + 2L_9520288_9520294_+ 0.823288988 0.82328906 0.823289024 7.07E-08 CG33298 FBtr0089854|FBtr0301065|FBtr0089853|FBtr0301064 9519753|9519753|9519767|9519753 9520696|9520696|9520696|9520696 2L + 9520103 9520333 3'utr CG33298 FlyBase G3407.2 ACTAGGGAGCCAGAAGTGCTCGAGAATTGAACCCAACCTAACCGACTATTGTTAAATAGAAGCGAAAATGCAATGCTTATTTATGTGTACGATTATTTAAACTAGCGACTAATAGATGTATCACCCTAACAGAAATACTTGACAATTCAAACACAACAGAACTCCATTGCGAGTTCGATGATAAGGCTGTGATTCTACACTCATGAAGGATATACCTAAGCATATGATATA 667 9520284 0.872483124 32 627 5108 0.941634241 2.161966616 0.029831388 0.142428786 0.258106355 667 41 4 726 2L:9520103-9520333 7 CG33298 FBtr0301064|FBtr0089853|FBtr0301065|FBtr0089854 9519753|9519767|9519753|9519753 9520696|9520696|9520696|9520696 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L + 9520200 9520334 3'utr CG33298 FlyBase G2694.1 TAAACTAGCGACTAATAGATGTATCACCCTAACAGAAATACTTGACAATTCAAACACAACAGAACTCCATTGCGAGTTCGATGATAAGGCTGTGATTCTACACTCATGAAGGATATACCTAAGCATATGATATAT 441 9520283 0.813376428 19 414 3437 0.939882698 2.329736775 0.021994135 0.392290249 0.607038123 441 39 2 641 2L:9520200-9520334 7 510.5 1075 FBgn0032120 1173.196667 22.66 34.66333333 0.435135911 22.52868491 14.72737763 4 5 4.5 0.01 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 9539238 9539244 + 2L_9539238_9539244_+ 0.823349562 0.823349562 0.823349562 0 Oatp30B FBtr0079825|FBtr0079826|FBtr0079828|FBtr0079827 9538653|9538653|9538653|9538653 9540060|9540060|9540060|9540045 2L + 9539212 9539257 3'utr Oatp30B FlyBase G3412.1 ATTTAACCATTGTCAATGGAAATTGTGCTGTGAAACAATTTGTGAG 201 9539235 0.727564593 5 195 1097 0.977011494 1.62838893 0.011494253 0.23880597 0.413793103 201 1 5 255 2L:9539212-9539257 7 Oatp30B FBtr0079827|FBtr0079828|FBtr0079826|FBtr0079825 9538653|9538653|9538653|9538653 9540045|9540060|9540060|9540060 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L + 9539213 9539260 3'utr Oatp30B FlyBase G2697.1 TTTAACCATTGTCAATGGAAATTGTGCTGTGAAACAATTTGTGAGTAT 155 9539235 0.719439841 5 154 833 0.995594714 2.354108439 0 0.35483871 0.559471366 155 1 0 226 2L:9539213-9539260 7 177.5 1076 FBgn0032123 86 1.96 2.986666667 2.063953488 90.56122449 59.43080357 3 3 3 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG 2L 9549156 9549161 - 2L_9549156_9549161_- 1 1 1 0 jp FBtr0079861|FBtr0113030|FBtr0304057|FBtr0304056|FBtr0079860 9548256|9548256|9548256|9549012|9547718 9549578|9549578|9549578|9549578|9549578 2L - 9549147 9549183 3'utr jp FlyBase G9323.1 AAATACATACTTAAATCGCGTGGCTGTGCAGCCAATC 25 9549163 0.829425424 2 23 116 0.939393939 1.491361694 0 0.2 0.393939394 25 2 0 31 2L:9549147-9549183 6 jp FBtr0304057|FBtr0304056|FBtr0079861|FBtr0113030|FBtr0079860 9548256|9549012|9548256|9548256|9547718 9549578|9549578|9549578|9549578|9549578 GCTGTG 6mer2-7 dme-miR-1008-3p 2L - 9549148 9549176 3'utr jp FlyBase G7235.1 TACTTAAATCGCGTGGCTGTGCAGCCAAT 12 9549163 0.811238097 2 12 52 1 1.278753601 0 0.5 0.684210526 12 0 0 19 2L:9549148-9549176 6 18.5 1077 FBgn0032129 7.333333333 0.28 0.416666667 2.522727273 66.07142857 44.4 2 2 2 0.01 dme-miR-2a-2-5p 7mer-m8 TGATGAG 2L 9549370 9549376 - 2L_9549370_9549376_- 0.658999343 0.658999343 0.658999343 0 jp FBtr0079861|FBtr0113030|FBtr0304057|FBtr0304056|FBtr0079860 9548256|9548256|9548256|9549012|9547718 9549578|9549578|9549578|9549578|9549578 2L - 9549358 9549395 3'utr jp FlyBase G9324.1 AAGTTTTTAGCATTTGCAGTGATGAGTTGATATAAAGC 6 9549382 0.629858196 4 6 52 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 2L:9549358-9549395 7 jp FBtr0304057|FBtr0304056|FBtr0079861|FBtr0113030|FBtr0079860 9548256|9549012|9548256|9548256|9547718 9549578|9549578|9549578|9549578|9549578 TGATGAG 7mer-m8 dme-miR-2a-2-5p 2L - 9549346 9549395 3'utr jp FlyBase G7237.1 AAGTTTTTAGCATTTGCAGTGATGAGTTGATATAAAGCAGAACTTATATA 8 9549382 0.979965384 7 8 60 1 1.204119983 0.0625 0.375 0.6875 8 0 0 16 2L:9549346-9549395 7 6.5 1078 FBgn0032129 7.333333333 0.28 0.416666667 0.886363636 23.21428571 15.6 6 6 6 0.01 dme-miR-965-3p 6mer3-8 TACGCT 2L 9573437 9573442 + 2L_9573437_9573442_+ 1 0.999648646 0.999824323 0.000248477 CG3838 FBtr0079835|FBtr0079834 9572964|9572964 9573572|9573572 2L + 9573414 9573485 3'utr CG3838 FlyBase G3419.1 TGTTAGTTTAAGGACACTGTATATACGCTGCTATTGAAACCTAAACTATAGAATCTGTGTACAAATGAATTT 21 9573447 0.976981402 6 20 138 0.962962963 1.414973348 0 0.238095238 0.407407407 21 1 0 26 2L:9573414-9573485 6 CG3838 FBtr0079835|FBtr0079834 9572964|9572964 9573572|9573572 TACGCT 6mer3-8 dme-miR-965-3p 2L + 9573424 9573484 3'utr CG3838 FlyBase G2703.1 AGGACACTGTATATACGCTGCTATTGAAACCTAAACTATAGAATCTGTGTACAAATGAATT 10 9573447 0.981415008 7 9 59 0.875 0.669006781 0.0625 0.3 0.5625 10 0 2 14 2L:9573424-9573484 6 8.5 1079 FBgn0032130 513.3333333 25.81 39.59333333 0.016558442 0.329329717 0.214682606 -10 -10 -10 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 2L 9573472 9573478 + 2L_9573472_9573478_+ 0.782911824 0.782911824 0.782911824 0 CG3838 FBtr0079835|FBtr0079834 9572964|9572964 9573572|9573572 2L + 9573414 9573485 3'utr CG3838 FlyBase G3419.1 TGTTAGTTTAAGGACACTGTATATACGCTGCTATTGAAACCTAAACTATAGAATCTGTGTACAAATGAATTT 21 9573447 0.976981402 6 20 138 0.962962963 1.414973348 0 0.238095238 0.407407407 21 1 0 26 2L:9573414-9573485 7 CG3838 FBtr0079835|FBtr0079834 9572964|9572964 9573572|9573572 GTACAAA 7mer-A1 dme-miR-305-5p 2L + 9573424 9573484 3'utr CG3838 FlyBase G2703.1 AGGACACTGTATATACGCTGCTATTGAAACCTAAACTATAGAATCTGTGTACAAATGAATT 10 9573468 0.981415008 7 9 59 0.875 0.669006781 0.0625 0.3 0.5625 10 0 2 14 2L:9573424-9573484 7 7 1080 FBgn0032130 513.3333333 25.81 39.59333333 0.013636364 0.271212708 0.176797441 25 4 14.5 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG 2L 9573534 9573539 + 2L_9573534_9573539_+ 1 1 1 0 CG3838 FBtr0079835|FBtr0079834 9572964|9572964 9573572|9573572 2L + 9573509 9573552 3'utr CG3838 FlyBase G3420.1 TAAAGAGATAGATCGATATCAAACTGCTGTGTGTAATAATAAAC 17 9573540 0.967257934 5 16 120 0.954545455 1.322219295 0.045454545 0.235294118 0.409090909 17 1 0 21 2L:9573509-9573552 6 CG3838 FBtr0079835|FBtr0079834 9572964|9572964 9573572|9573572 GCTGTG 6mer2-7 dme-miR-1008-3p 2L + 9573517 9573553 3'utr CG3838 FlyBase G2704.1 TAGATCGATATCAAACTGCTGTGTGTAATAATAAACA 8 9573540 0.672032578 3 7 58 0.9 0.954242509 0 0.25 0.4 8 1 0 9 2L:9573517-9573553 6 12.5 1081 FBgn0032130 513.3333333 25.81 39.59333333 0.024350649 0.484308408 0.315709715 -6 -6 -6 0.01 dme-miR-184-3p 6mer2-7 CCGTCC 2L 9615705 9615710 + 2L_9615705_9615710_+ 1 1 1 0 Trx-2 FBtr0079839|FBtr0079840 9615680|9615680 9616404|9616047 2L + 9615577 9615781 stop_codon Trx-2 FlyBase G3425.1 TCCAGCATGCCCACCTTCGTGTTCCTCAAGAACGGCGTCAAGGTCGAAGAGTTCGCCGGAGCCAACGCCAAGCGTCTGGAGGATGTCATCAAGGCCAATATCTAAGTGGGCAGCGCATAGACGTCTGGCCGTCCCCCTGATCCACCTATGAGTTTTCTTCATAACATTTAGTTAATTAATTAATTCCATAAGTGCAGGGTTTTGC 90 9615702 0.980793021 26 83 594 0.923076923 1.380211242 0.230769231 0.155555556 0.269230769 90 5 3 96 2L:9615577-9615781 6 Trx-2 FBtr0079840|FBtr0079839 9615680|9615680 9616047|9616404 CCGTCC 6mer2-7 dme-miR-184-3p 2L + 9615616 9615741 stop_codon Trx-2 FlyBase G2707.1 AAGGTCGAAGAGTTCGCCGGAGCCAACGCCAAGCGTCTGGAGGATGTCATCAAGGCCAATATCTAAGTGGGCAGCGCATAGACGTCTGGCCGTCCCCCTGATCCACCTATGAGTTTTCTTCATAAC 47 9615702 0.885607615 16 42 263 0.944444444 1.531478917 0.166666667 0.361702128 0.583333333 47 3 1 68 2L:9615616-9615741 6 32 1082 FBgn0040070 814.6666667 126.4433333 193.1533333 0.039279869 0.253077795 0.165671487 3 3 3 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 2L 9622451 9622456 + 2L_9622451_9622456_+ 0.999999928 0.999999957 0.999999943 7.07E-08 GlcAT-S FBtr0079842|FBtr0079842|FBtr0079841|FBtr0079841 9622426|9622426|9622426|9622426 9623109|9623109|9623109|9623109 2L + 9622419 9622483 stop_codon GlcAT-S FlyBase G3431.1 CTTAGCTGAGTCCTATGGTCCAACCCGAATAATACTTATAGACTTTTAGAGCTAAATGTATAGTT 74 9622464 0.98430108 7 73 587 0.988235294 1.924279286 0.164705882 0.148648649 0.258823529 74 1 0 84 2L:9622419-9622483 6 GlcAT-S FBtr0079842|FBtr0079842|FBtr0302199|FBtr0302199|FBtr0079841|FBtr0079841 9622426|9622426|9622426|9622426|9622426|9622426 9623109|9623109|9622588|9622588|9623109|9623109 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 2L + 9622443 9622504 3'utr GlcAT-S FlyBase G2713.1 CCGAATAATACTTATAGACTTTTAGAGCTAAATGTATAGTTATTCTAAAACAAATCTCGAAT 42 9622464 0.982664584 7 41 314 1 1.785329835 0.245901639 0.404761905 0.590163934 42 0 0 61 2L:9622443-9622504 6 55 1083 FBgn0032135 82.33333333 4.263333333 6.536666667 0.668016194 12.90070367 8.414074452 -13 -13 -13 0.01 dme-miR-184-5p 6mer2-7 GATAAG 2L 9622675 9622680 + 2L_9622675_9622680_+ 1 1 1 0 GlcAT-S FBtr0079842|FBtr0079841 9622426|9622426 9623109|9623109 2L + 9622652 9622714 3'utr GlcAT-S FlyBase G3432.1 GCATGTATTGTTAATTAGTTGTAGATAAGTTTGTTCGTGATAGCAATATAGGAAACACAGGGA 16 9622683 0.987958162 6 15 141 0.947368421 1.255272505 0.157894737 0.1875 0.315789474 16 1 0 18 2L:9622652-9622714 6 GlcAT-S FBtr0079842|FBtr0079841 9622426|9622426 9623109|9623109 GATAAG 6mer2-7 dme-miR-184-5p 2L + 9622664 9622705 3'utr GlcAT-S FlyBase G2715.1 AATTAGTTGTAGATAAGTTTGTTCGTGATAGCAATATAGGAA 10 9622683 0.695465586 3 10 90 1 1.146128036 0.142857143 0.3 0.5 10 0 0 14 2L:9622664-9622705 6 10 1084 FBgn0032135 82.33333333 4.263333333 6.536666667 0.12145749 2.345582486 1.529831719 -8 -8 -8 0.01 dme-miR-968-5p 7mer-m8 ACTACTT 2L 9682843 9682849 - 2L_9682843_9682849_- 0.63152533 0.631325373 0.631425351 0.000141351 Pka-C1 FBtr0079851|FBtr0079852 9682313|9682313 9696504|9696504 2L - 9682827 9682871 3'utr Pka-C1 FlyBase G9342.1 GATACATTATGCACTAATTTGTACTACTTTTATCGTCTATCTATT 16 9682852 0.80132787 2 16 205 1 1.230448921 0.117647059 0.0625 0.117647059 16 0 0 17 2L:9682827-9682871 7 Pka-C1 FBtr0079852|FBtr0079851 9682313|9682313 9696504|9696504 ACTACTT 7mer-m8 dme-miR-968-5p 2L - 9682831 9682864 3'utr Pka-C1 FlyBase G7262.1 TATGCACTAATTTGTACTACTTTTATCGTCTATC 13 9682852 0.693629994 2 12 137 0.894736842 1.230448921 0 0.461538462 0.631578947 13 2 0 17 2L:9682831-9682864 7 14.5 1085 FBgn0000273 1905.386667 46.66 72.09 0.007610004 0.31075868 0.201137467 3 3 3 0.01 dme-miR-1007-3p 7mer-m8 TGAGCTT 2L 9682921 9682927 - 2L_9682921_9682927_- 0.606689419 0.600095965 0.603392692 0.004662238 Pka-C1 FBtr0079851|FBtr0079852 9682313|9682313 9696504|9696504 2L - 9682875 9682947 3'utr Pka-C1 FlyBase G9343.1 AATATCTGAGGAGCCCAACCTGAGCTTTACTATCTGACTAACGATTTGAATGCATGCTTTACGTTATTGTATT 61 9682927 0.983869295 6 60 378 0.985074627 1.819543936 0.23880597 0.049180328 0.134328358 61 1 0 66 2L:9682875-9682947 7 Pka-C1 FBtr0079852|FBtr0079851 9682313|9682313 9696504|9696504 TGAGCTT 7mer-m8 dme-miR-1007-3p 2L - 9682883 9682946 3'utr Pka-C1 FlyBase G7263.1 ATATCTGAGGAGCCCAACCTGAGCTTTACTATCTGACTAACGATTTGAATGCATGCTTTACGTT 43 9682927 0.98910942 3 43 283 1 1.755874856 0.315789474 0.302325581 0.473684211 43 0 0 57 2L:9682883-9682946 7 49.5 1086 FBgn0000273 1905.386667 46.66 72.09 0.025978979 1.060865838 0.686641698 0 0 0 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2L 9683573 9683578 - 2L_9683573_9683578_- 1 1 1 0 Pka-C1 FBtr0079851|FBtr0335495|FBtr0079852 9682313|9683360|9682313 9696504|9696504|9696504 2L - 9683513 9683603 3'utr Pka-C1 FlyBase G9347.1 CTGTTATTATTTATTTCTAAAAGTGAAGACTTTTAAATTATGTTGTTGTGAGATGAGAGAAGAGATATAAAGAGCGAGAGCAACTCGGGAT 66 9683571 0.986744313 6 65 478 0.976190476 1.913813852 0.05952381 0.196969697 0.369047619 66 2 0 82 2L:9683513-9683603 6 Pka-C1 FBtr0335495|FBtr0079852|FBtr0079851 9683360|9682313|9682313 9696504|9696504|9696504 AAGACT 6mer3-8 dme-miR-14-3p 2L - 9683480 9683597 3'utr Pka-C1 FlyBase G7266.1 TTATTTATTTCTAAAAGTGAAGACTTTTAAATTATGTTGTTGTGAGATGAGAGAAGAGATATAAAGAGCGAGAGCAACTCGGGATCGTAACAAATAACAAATAAATTTAATTTATAGA 49 9683571 0.98632084 10 46 388 0.913043478 1.799340549 0.028985507 0.265306122 0.47826087 49 6 0 63 2L:9683480-9683597 6 49.5 1087 FBgn0000273 1905.386667 46.66 72.09 0.025978979 1.060865838 0.686641698 -7 -7 -7 0.01 dme-miR-283-5p 7mer-m1 GATATTT 2L 9684995 9685001 - 2L_9684995_9685001_- 0.765586663 0.765586663 0.765586663 0 Pka-C1 FBtr0079851|FBtr0335495|FBtr0079852 9682313|9683360|9682313 9696504|9696504|9696504 2L - 9684964 9685020 3'utr Pka-C1 FlyBase G9351.1 ATTTAACCACGAGACTACAGATATTTAGTTGTAAACGTAGCTTAGTCTTAACTAAAG 9 9684993 0.863093103 6 8 73 0.9 0.954242509 0 0.111111111 0.2 9 1 0 9 2L:9684964-9685020 7 Pka-C1 FBtr0335495|FBtr0079852|FBtr0079851 9683360|9682313|9682313 9696504|9696504|9696504 GATATTT 7mer-m1 dme-miR-283-5p 2L - 9684964 9685018 3'utr Pka-C1 FlyBase G7267.1 TTAACCACGAGACTACAGATATTTAGTTGTAAACGTAGCTTAGTCTTAACTAAAG 6 9684996 0.982125427 4 6 50 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 2L:9684964-9685018 7 7 1088 FBgn0000273 1905.386667 46.66 72.09 0.003673795 0.150021432 0.097100846 -8 -5 -6.5 0.01 dme-miR-277-3p 6mer2-7 GCATTT 2L 9708303 9708308 + 2L_9708303_9708308_+ 1 1 1 0 pelo FBtr0079847 9708268 9708883 2L + 9708265 9708345 stop_codon pelo FlyBase G3490.1 ACTAGGATCATAAATAGGAATAGCTTCATGGAATCTTGGCATTTGATAACGGAAAATTTTGACTTAGGAACTTAACTAGCG 40 9708293 0.974859371 8 39 281 0.980392157 1.397940009 0.215686275 0.225 0.392156863 40 0 1 50 2L:9708265-9708345 6 pelo FBtr0079847 9708268 9708883 GCATTT 6mer2-7 dme-miR-277-3p 2L + 9708254 9708346 stop_codon pelo FlyBase G2746.1 TAGCGATAGCGACTAGGATCATAAATAGGAATAGCTTCATGGAATCTTGGCATTTGATAACGGAAAATTTTGACTTAGGAACTTAACTAGCGA 27 9708323 0.98099544 8 24 170 0.923076923 1.255272505 0.025641026 0.296296296 0.512820513 27 2 1 36 2L:9708254-9708346 6 21 1089 FBgn0011207 455.0266667 27.06 41.48666667 0.046151141 0.776053215 0.506186727 10 -20 -5 0.01 dme-miR-184-5p 6mer3-8 TGATAA 2L 9737291 9737296 + 2L_9737291_9737296_+ 1 1 1 0 CG13117 FBtr0079864|FBtr0335503 9737041|9737041 9737329|9737949 2L + 9737165 9737317 3'utr CG13117 FlyBase G3500.1 TTCATGCCCCAAAATTGCTTACCGGATTCGGGAGTCGGAATGGGAGGATAGAAATGGCTGCCCAGGGCTAAACCAACTATGTATATAAGCATCCCATGAATATTTATGTGCCACCCTCCTGTACCCTGATAATGCAATAAAAGTATTATTTGA 124 9737284 0.975840058 16 120 756 0.966666667 2.161368002 0.1 0.169354839 0.313333333 124 5 0 145 2L:9737165-9737317 6 CG13117 FBtr0335503|FBtr0079864 9737041|9737041 9737949|9737329 TGATAA 6mer3-8 dme-miR-184-5p 2L + 9737251 9737320 3'utr CG13117 FlyBase G2751.1 AAGCATCCCATGAATATTTATGTGCCACCCTCCTGTACCCTGATAATGCAATAAAAGTATTATTTGATAG 90 9737284 0.719749638 9 85 544 0.965753425 2.149219113 0.116438356 0.388888889 0.623287671 90 5 0 141 2L:9737251-9737320 6 91.5 1090 FBgn0032140 1013.62 184.7266667 282.6533333 0.090270516 0.495326428 0.3237181 7 7 7 0.01 dme-miR-305-5p 6mer2-7 GTACAA 2L 9762211 9762216 + 2L_9762211_9762216_+ 1 1 1 0 zf30C FBtr0079865 9762140 9762375 2L + 9762187 9762223 3'utr zf30C FlyBase G3517.1 TTGTAAACGGATGCGTATTCTACTGTACAACAAATGG 10 9762209 0.740033823 4 10 68 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 2L:9762187-9762223 6 zf30C FBtr0079865 9762140 9762375 GTACAA 6mer2-7 dme-miR-305-5p 2L + 9762185 9762226 3'utr zf30C FlyBase G2769.1 TTTTGTAAACGGATGCGTATTCTACTGTACAACAAATGGGAT 6 9762210 0.989693604 2 5 54 0.9 0.954242509 0.3 0.333333333 0.6 6 1 0 9 2L:9762185-9762226 6 7.5 1091 FBgn0022720 989.03 40.54 62.34666667 0.007583188 0.185002467 0.120295124 2 1 1.5 0.01 dme-miR-1002-5p 8mer-A1 CTACTTAA 2L 9762246 9762253 + 2L_9762246_9762253_+ 0.624180758 0.551194664 0.587687711 0.051608966 zf30C FBtr0079865 9762140 9762375 2L + 9762236 9762274 3'utr zf30C FlyBase G3518.1 ATAATAATATCTACTTAATGACTGGATTAATTAAATAAC 11 9762252 0.632889169 6 10 86 0.933333333 0.84509804 0.066666667 0.272727273 0.466666667 11 0 1 14 2L:9762236-9762274 8 zf30C FBtr0079865 9762140 9762375 CTACTTAA 8mer-A1 dme-miR-1002-5p 2L + 9762236 9762273 3'utr zf30C FlyBase G2770.1 ATAATAATATCTACTTAATGACTGGATTAATTAAATAA 10 9762250 0.728046111 8 10 76 1 1.255272505 0 0.6 0.777777778 10 0 0 18 2L:9762236-9762273 8 10 1092 FBgn0022720 989.03 40.54 62.34666667 0.010110917 0.246669956 0.160393499 -6 -4 -5 0.01 dme-miR-2b-2-5p 7mer-A1 TGAAGAA 2L 9890063 9890069 + 2L_9890063_9890069_+ 0.823349562 0.823349562 0.823349562 0 FKBP59 FBtr0342837|FBtr0079872 9889989|9889989 9890119|9890119 2L + 9890034 9890092 3'utr FKBP59 FlyBase G3553.1 AATCCCACATCGAAAATCCAGTAATGTAATGAAGAAATGGTCTTAATGCTTATACGAAA 13 9890071 0.973548265 3 13 79 1 1.176091259 0.066666667 0.076923077 0.2 13 0 0 15 2L:9890034-9890092 7 FKBP59 FBtr0342837|FBtr0079872 9889989|9889989 9890119|9890119 TGAAGAA 7mer-A1 dme-miR-2b-2-5p 2L + 9890034 9890115 3'utr FKBP59 FlyBase G2808.1 AATCCCACATCGAAAATCCAGTAATGTAATGAAGAAATGGTCTTAATGCTTATACGAAATAAATATAAACGCTTTGAGAGCT 15 9890071 0.96580578 4 15 84 1 1.414973348 0.038461538 0.466666667 0.692307692 15 0 0 26 2L:9890034-9890115 7 11 1093 FBgn0029174 1272.643333 104.36 159.8766667 0.008643427 0.105404369 0.068803036 -8 -8 -8 0.01 dme-miR-79-3p 6mer2-7 AGCTTT 2L 9909 9914 - 2L_9909_9914_- 1 1 1 0 l(2)gl FBtr0078168|FBtr0306591|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0306590|FBtr0078170|FBtr0330655|FBtr0078171|FBtr0306592|FBtr0078166 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11214|11214|11214|11214|11309|11214|11214|11214 2L - 9885 9932 3'utr l(2)gl FlyBase G6256.1 ATGTTACAGGCAGAAGGAAGCTTTTCCGACCATATAAAGTATATAATT 45 9909 0.747433946 3 43 280 0.957446809 1.653212514 0.106382979 0.044444444 0.085106383 45 2 0 45 2L:9885-9932 6 l(2)gl FBtr0306592|FBtr0306590|FBtr0078166|FBtr0330655|FBtr0078171|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0078170|FBtr0078168|FBtr0306591 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11309|11214|11214|11214|11214|11214|11214|11214 AGCTTT 6mer2-7 dme-miR-79-3p 2L - 9886 9977 3'utr l(2)gl FlyBase G4878.2 AAAAGGTATAGTATATACAATAGTATTGTAGATTCGTTGAGAAGTATGTTACAGGCAGAAGGAAGCTTTTCCGACCATATAAAGTATATAAT 27 9909 0.772933269 9 27 199 1 1.591064607 0.333333333 0.333333333 0.538461538 27 0 0 39 2L:9886-9977 6 30.5 1094 FBgn0002121 6538.69 148.3266667 227.85 0.004664543 0.205627219 0.133859996 -5 -5 -5 0.01 dme-miR-184-3p 6mer2-7 CCGTCC 2L 9917337 9917342 - 2L_9917337_9917342_- 1 1 1 0 CG5885 FBtr0079900 9917219 9917442 2L - 9917330 9917426 3'utr CG5885 FlyBase G9438.1 GTCATCCCATGTTCATGTACTCGTAATGTAAGGCCCTTCAAGAGATTTCCTGGTACAGCGGGCTGGTCCTTCATCCGCCAACCCCCGTCCCATTGGC 56 9917334 0.815881578 13 53 277 0.970588235 1.819543936 0.161764706 0.196428571 0.338235294 56 2 0 66 2L:9917330-9917426 6 CG5885 FBtr0079900 9917219 9917442 CCGTCC 6mer2-7 dme-miR-184-3p 2L - 9917330 9917356 3'utr CG5885 FlyBase G7338.1 TCATCCGCCAACCCCCGTCCCATTGGC 17 9917334 0.796841211 3 16 39 1 1.431363764 0 0.352941176 0.592592593 17 0 0 27 2L:9917330-9917356 6 20 1095 FBgn0025700 675 95.89333333 146.9 0.02962963 0.208565072 0.136147039 -8 -8 -8 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC 2L 9935126 9935132 - 2L_9935126_9935132_- 0.661615645 0.661615645 0.661615645 0 CG31712 FBtr0079896|FBtr0331636 9934765|9934765 9935255|9937003 2L - 9935089 9935143 3'utr CG31712 FlyBase G9443.1 ATTGTTGTAATTGTGTTCTATATTATTTTTATTATTTTAAGGACGAGCTGTGGTG 13 9935133 0.992917741 3 13 159 1 1.176091259 0.333333333 0.153846154 0.266666667 13 0 0 15 2L:9935089-9935143 7 CG31712 FBtr0331636|FBtr0079896 9934765|9934765 9937003|9935255 TGTGTTC 7mer-m8 dme-miR-317-3p 2L - 9935107 9935147 3'utr CG31712 FlyBase G7341.1 TTTCATTGTTGTAATTGTGTTCTATATTATTTTTATTATTT 14 9935133 0.771693206 3 12 182 0.888888889 1.380211242 0.481481481 0.428571429 0.703703704 14 3 0 24 2L:9935107-9935147 7 12.5 1096 FBgn0051712 467.1633333 25.39666667 38.91333333 0.026757237 0.492190576 0.321226658 1 1 1 0.01 dme-miR-14-3p 6mer2-7 AGACTG 2L 9935651 9935656 - 2L_9935651_9935656_- 1 1 1 0 CG31712 FBtr0331636 9934765 9937003 2L - 9935637 9935674 5'utr CG31712 FlyBase G9444.1 TGCATCGCTGATGTCAAGAGACTGTTTATTTCTATAAT 14 9935649 0.695281336 4 13 111 1 1.230448921 0.235294118 0.142857143 0.294117647 14 0 0 17 2L:9935637-9935674 6 CG31712 FBtr0331636 9934765 9937003 AGACTG 6mer2-7 dme-miR-14-3p 2L - 9935640 9935673 5'utr CG31712 FlyBase G7342.1 GCATCGCTGATGTCAAGAGACTGTTTATTTCTAT 16 9935648 0.588694729 6 14 119 0.904761905 0.977723605 0.238095238 0.3125 0.476190476 16 1 1 19 2L:9935640-9935673 6 14.5 1097 FBgn0051712 467.1633333 25.39666667 38.91333333 0.031038395 0.570941068 0.372622923 -7 -8 -7.5 0.01 dme-miR-14-3p 6mer2-7 AGACTG 2L 9959387 9959392 - 2L_9959387_9959392_- 1 1 1 0 CG5850 FBtr0309209 9959246 9961354 2L - 9959362 9959407 3'utr CG5850 FlyBase G9457.1 TGTTTTTAACAGCTTAGACTGGAGATAATGCCGTTTATAACGATAT 10 9959394 0.975115098 3 10 66 1 1.079181246 0.25 0.1 0.25 10 0 0 12 2L:9959362-9959407 6 CG5850 FBtr0309209 9959246 9961354 AGACTG 6mer2-7 dme-miR-14-3p 2L - 9959374 9959402 3'utr CG5850 FlyBase G7348.1 TTAACAGCTTAGACTGGAGATAATGCCGT 6 9959394 0.74304757 2 6 25 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2L:9959374-9959402 6 8 1098 FBgn0032172 968.71 41.72666667 64.24 0.008258406 0.191723918 0.124533001 2 2 2 0.01 dme-miR-1006-3p 6mer2-7 GAATTT 2L 9959858 9959863 + 2L_9959858_9959863_+ 1 1 1 0 CG4658 FBtr0343738|FBtr0079887|FBtr0079885|FBtr0079886 9959719|9959719|9959719|9959719 9960168|9960168|9960168|9960168 2L + 9959806 9959928 3'utr CG4658 FlyBase G3608.1 CTGGGATTTGCTATAGTTATGCACTCGCAGCACGAGAAGTAATCACTGGACTGAATTTGTTTTTAATTGATGTTGATTGATATTCGGTTTACTTGTTTTTCTTTCTATTATCAGTGTTTAGTA 168 9959852 0.979499304 20 163 1170 0.974489796 1.803912113 0.163265306 0.130952381 0.255102041 168 3 2 191 2L:9959806-9959928 6 CG4658 FBtr0079885|FBtr0079886|FBtr0343738|FBtr0079887 9959719|9959719|9959719|9959719 9960168|9960168|9960168|9960168 GAATTT 6mer2-7 dme-miR-1006-3p 2L + 9959781 9959901 3'utr CG4658 FlyBase G2845.1 GAGGGGCATGCCACATTGAAATTTACTGGGATTTGCTATAGTTATGCACTCGCAGCACGAGAAGTAATCACTGGACTGAATTTGTTTTTAATTGATGTTGATTGATATTCGGTTTACTTGT 151 9959852 0.97960447 14 145 1010 0.955752212 2.334453751 0.159292035 0.377483444 0.584070796 151 10 0 216 2L:9959781-9959901 6 144.5 1099 FBgn0032170 375.85 20.51333333 31.41333333 0.384461886 7.044198895 4.599957555 6 6 6 0.01 dme-miR-1006-3p 6mer2-7 GAATTT 2L 9960548 9960553 - 2L_9960548_9960553_- 1 1 1 0 CG5850 FBtr0309209|FBtr0309210|FBtr0309211|FBtr0329986|FBtr0079890|FBtr0303901 9959246|9960448|9960448|9960448|9960448|9960448 9961354|9961354|9961354|9961003|9961354|9961354 2L - 9960458 9960620 3'utr CG5850 FlyBase G9459.1 ATGTAGGTCTCCAACTTTTTGTGTGGCGAAGTAGTTAATTAAAAAAAAACATGCCTGAACCGATTGTGAATTTTGTGACTGCCGCCGGTCAGAAAAGGGCGTGACTTGTATTTAAATAGAAATTCTTATTGTAAAACTAATATACACATCAATAATATAATAT 107 9960556 0.983290046 19 102 789 0.955555556 1.809559715 0.162962963 0.224299065 0.385185185 107 5 1 129 2L:9960458-9960620 6 CG5850 FBtr0079890|FBtr0303901|FBtr0309211|FBtr0329986|FBtr0309209|FBtr0309210 9960448|9960448|9960448|9960448|9959246|9960448 9961354|9961354|9961354|9961003|9961354|9961354 GAATTT 6mer2-7 dme-miR-1006-3p 2L - 9960460 9960579 3'utr CG5850 FlyBase G7350.1 AAAAAAAACATGCCTGAACCGATTGTGAATTTTGTGACTGCCGCCGGTCAGAAAAGGGCGTGACTTGTATTTAAATAGAAATTCTTATTGTAAAACTAATATACACATCAATAATATAAT 87 9960549 0.983647737 15 84 639 0.965517241 2.049218023 0.181034483 0.287356322 0.465517241 87 4 0 112 2L:9960460-9960579 6 80.5 1100 FBgn0032172 968.71 41.72666667 64.24 0.083100205 1.92922192 1.253113325 3 -4 -0.5 0.01 dme-miR-305-5p 6mer3-8 AGTACA 2L 9961012 9961017 - 2L_9961012_9961017_- 1 1 1 0 CG5850 FBtr0309209|FBtr0309210|FBtr0309211|FBtr0079890|FBtr0303901 9959246|9960448|9960448|9960448|9960448 9961354|9961354|9961354|9961354|9961354 2L - 9960890 9961015 stop_codon CG5850 FlyBase G9462.1 TACATCACCTAGACGCGCTGACCTTAAAGCCCCTTATCAGTTATATGCTATGCTTATATTTATTGTTTTTCCCCATCCCATATCTTGATTTGTGCTAGGCTTAGAATACTCATGAAACGAACACTT 71 9960997 0.996414622 21 67 561 0.948717949 1.392110465 0.08974359 0.084507042 0.166666667 71 2 2 74 2L:9960890-9961015 4 CG5850 FBtr0079890|FBtr0303901|FBtr0309211|FBtr0309209|FBtr0309210 9960448|9960448|9960448|9959246|9960448 9961354|9961354|9961354|9961354|9961354 AGTACA 6mer3-8 dme-miR-305-5p 2L - 9960891 9961030 stop_codon CG5850 FlyBase G7353.1 CGCCGCGATCGAGAGTACATCACCTAGACGCGCTGACCTTAAAGCCCCTTATCAGTTATATGCTATGCTTATATTTATTGTTTTTCCCCATCCCATATCTTGATTTGTGCTAGGCTTAGAATACTCATGAAACGAACACT 40 9960997 0.995190496 17 35 293 0.846153846 1.041392685 0.138461538 0.5 0.692307692 40 6 4 55 2L:9960891-9961030 6 8.5 1101 FBgn0032172 968.71 41.72666667 64.24 0.008774556 0.203706662 0.132316314 -20 -20 -20 0.01 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2L 9964338 9964343 - 2L_9964338_9964343_- 1 1 1 0 Dref FBtr0310483|FBtr0079889 9964278|9964145 9964544|9964544 2L - 9964319 9964402 3'utr Dref FlyBase G9472.1 AGCCTTGGGACGTACACGGAACATCTTAAGTTATCGACGTATAAATGTTAAGGGAACATTTTGACATCATATATTCAAATCAAA 12 9964342 0.974404867 5 12 70 1 1.204119983 0.3125 0.333333333 0.5 12 0 0 16 2L:9964319-9964402 6 Dref FBtr0310483|FBtr0079889 9964278|9964145 9964544|9964544 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2L - 9964330 9964353 3'utr Dref FlyBase G7360.1 AAGGGAACATTTTGACATCATATA 7 9964342 0.638058883 2 6 38 1 1.079181246 0.166666667 0.428571429 0.666666667 7 0 0 12 2L:9964330-9964353 6 7.5 1102 FBgn0015664 973.63 41.70666667 63.79666667 0.007703132 0.179827366 0.117561001 -1 -1 -1 0.01 dme-miR-995-5p 7mer-m1 ATTCGGG 2L 9994802 9994808 + 2L_9994802_9994808_+ 0.825582373 0.825582373 0.825582373 0 bib FBtr0079929 9994657 9995538 2L + 9994762 9994809 stop_codon bib FlyBase G3616.1 AGCAGAGCAGTTTGTTTTAGTCGTAGTCGTACGTAGTAGCATTCGGGC 8 9994776 0.882348022 4 6 70 0.777777778 0.84509804 0.111111111 0.125 0.222222222 8 2 0 7 2L:9994762-9994809 7 bib FBtr0329984|FBtr0079929 9994780|9994657 9995538|9995538 ATTCGGG 7mer-m1 dme-miR-995-5p 2L + 9994744 9994818 stop_codon bib FlyBase G2854.1 ACCGCTGCAGCCTAGCCAAGCAGAGCAGTTTGTTTTAGTCGTAGTCGTACGTAGTAGCATTCGGGCATCGCATCC 6 9994803 0.960808783 4 6 33 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 2L:9994744-9994818 7 3.5 1103 FBgn0000180 1.333333333 0.05 0.08 2.625 70 43.75 26 -1 12.5 0.01 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 9994974 9994981 + 2L_9994974_9994981_+ 0.625364919 0.625364919 0.625364919 0 bib FBtr0329984|FBtr0079929 9994780|9994657 9995538|9995538 2L + 9994964 9994991 3'utr bib FlyBase G3617.1 AAAGATCATGTACGCTTAAGGAACTAAT 12 9994973 0.71476225 3 11 55 0.9375 1.176091259 0.125 0.333333333 0.5 12 1 0 15 2L:9994964-9994991 8 bib FBtr0329984|FBtr0079929 9994780|9994657 9995538|9995538 TACGCTTA 8mer-A1 dme-miR-965-3p 2L + 9994959 9994990 3'utr bib FlyBase G2856.1 CTAGCAAAGATCATGTACGCTTAAGGAACTAA 8 9994972 0.793843936 3 7 37 0.818181818 0.954242509 0.363636364 0.375 0.545454545 8 2 0 9 2L:9994959-9994990 8 10 1104 FBgn0000180 1.333333333 0.05 0.08 7.5 200 125 1 2 1.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 2L 9995037 9995042 + 2L_9995037_9995042_+ 0.917112934 0.96065217 0.938882552 0.030786934 bib FBtr0329984|FBtr0079929 9994780|9994657 9995538|9995538 2L + 9995002 9995066 3'utr bib FlyBase G3618.1 ATTCACCGAAGGCTAGACTAAACGAGTGATCTAGATGATCTAGACTGAAAGACAGGTGCATTTAA 15 9995040 0.952063857 5 15 65 1 1.278753601 0.157894737 0.266666667 0.421052632 15 0 0 19 2L:9995002-9995066 6 bib FBtr0329984|FBtr0079929 9994780|9994657 9995538|9995538 TGATCT 6mer3-8 dme-bantam-3p 2L + 9995001 9995065 3'utr bib FlyBase G2857.1 CATTCACCGAAGGCTAGACTAAACGAGTGATCTAGATGATCTAGACTGAAAGACAGGTGCATTTA 21 9995041 0.953744492 8 19 86 0.966666667 1.161368002 0.1 0.333333333 0.533333333 21 0 1 29 2L:9995001-9995065 6 13.5 1105 FBgn0000180 1.333333333 0.05 0.08 10.125 270 168.75 -3 -4 -3.5 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 2L 9995216 9995222 + 2L_9995216_9995222_+ 0.823349562 0.823349562 0.823349562 0 bib FBtr0329984|FBtr0079929 9994780|9994657 9995538|9995538 2L + 9995193 9995242 3'utr bib FlyBase G3619.1 ATGTTTCTTGTAAATGCAAAACTAGACTGAACTTACCTAAAGCATTTTGT 18 9995215 0.916712645 6 17 102 0.95 0.977723605 0.15 0.111111111 0.2 18 0 1 19 2L:9995193-9995242 7 bib FBtr0329984|FBtr0079929 9994780|9994657 9995538|9995538 AGACTGA 7mer-A1 dme-miR-14-3p 2L + 9995200 9995230 3'utr bib FlyBase G2858.1 TTGTAAATGCAAAACTAGACTGAACTTACCT 9 9995215 0.869672552 3 9 40 1 1.230448921 0 0.555555556 0.764705882 9 0 0 17 2L:9995200-9995230 7 13.5 1106 FBgn0000180 1.333333333 0.05 0.08 10.125 270 168.75 1 1 1 0.01 dme-miR-7-5p 7mer-A1 TCTTCCA 2L 9995956 9995962 - 2L_9995956_9995962_- 0.823349562 0.823349562 0.823349562 0 CG31875 FBtr0079973|FBtr0303883|FBtr0303884|FBtr0308121 9995559|9995559|9995559|9995559 9996005|9996005|9996005|9996005 2L - 9995926 9995987 3'utr CG31875 FlyBase G9488.1 GTGAATTAATCCCACATGGACTGTATCTTCCAAGCGCATGGTTATTTGGATTATGATAGTAT 41 9995971 0.978281172 3 40 272 0.979166667 1.672097858 0.1875 0.170731707 0.291666667 41 1 0 47 2L:9995926-9995987 7 CG31875 FBtr0308121|FBtr0303884|FBtr0303883|FBtr0079973 9995559|9995559|9995559|9995559 9996005|9996005|9996005|9996005 TCTTCCA 7mer-A1 dme-miR-7-5p 2L - 9995948 9995988 3'utr CG31875 FlyBase G7367.1 CGTGAATTAATCCCACATGGACTGTATCTTCCAAGCGCATG 22 9995971 0.919652031 4 22 134 1 1.431363764 0.074074074 0.181818182 0.333333333 22 0 0 27 2L:9995948-9995988 7 31 1107 FBgn0051875 18.32333333 1.95 2.983333333 1.691831908 15.8974359 10.39106145 9 9 9 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2R 10029424 10029429 - 2R_10029424_10029429_- 1 1 1 0 CG1407 FBtr0339418|FBtr0088436|FBtr0339420|FBtr0339419 10029261|10029261|10029261|10029261 10029804|10029804|10029804|10029804 2R - 10029377 10029502 3'utr CG1407 FlyBase G21603.1 TATCCTCCGAAGATTTGTACCTTGCTAATGCATTCATGAAACCAACTATCCTTGTAGATATCGAAAGATCTTCAAGACTTAAACCTAATGATAAGCAATGAGATTTCAGTACACACTATTAACACA 36 10029432 0.931954344 13 31 253 0.880952381 1.091080469 0.071428571 0.111111111 0.238095238 36 3 2 37 2R:10029377-10029502 6 CG1407 FBtr0339419|FBtr0088436|FBtr0339420|FBtr0339418 10029261|10029261|10029261|10029261 10029804|10029804|10029804|10029804 AAGACT 6mer3-8 dme-miR-14-3p 2R - 10029406 10029500 3'utr CG1407 FlyBase G16401.1 TCCTCCGAAGATTTGTACCTTGCTAATGCATTCATGAAACCAACTATCCTTGTAGATATCGAAAGATCTTCAAGACTTAAACCTAATGATAAGCA 26 10029432 0.743163647 10 21 161 0.756756757 1.447158031 0.243243243 0.346153846 0.540540541 26 9 0 28 2R:10029406-10029500 6 16 1108 FBgn0033474 835.29 47.03 72.28 0.019155024 0.340208378 0.221361372 3 3 3 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 2R 10029843 10029848 - 2R_10029843_10029848_- 1 1 1 0 CG1407 FBtr0300719 10029713 10031507 2R - 10029792 10029872 stop_codon CG1407 FlyBase G21606.1 ATCCGTTGACAAGCGCTGATCCTGCCAAAGGCTTCCCACGCCCGCCGAATGGCGATCTGCCAGTTTAAATAATAACGTAGA 14 10029853 0.953639791 7 13 61 1 1.176091259 0.2 0.071428571 0.133333333 14 0 0 15 2R:10029792-10029872 6 CG1407 FBtr0300719 10029713 10031507 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 10029826 10029872 3'utr CG1407 FlyBase G16404.1 ATCCGTTGACAAGCGCTGATCCTGCCAAAGGCTTCCCACGCCCGCCG 5 10029854 0.880776931 3 5 19 1 0.954242509 0.333333333 0.6 0.777777778 5 0 0 9 2R:10029826-10029872 6 8 1109 FBgn0033474 835.29 47.03 72.28 0.009577512 0.170104189 0.110680686 5 6 5.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 2R 10030113 10030118 - 2R_10030113_10030118_- 1 1 1 0 CG1407 FBtr0300719 10029713 10031507 2R - 10030097 10030143 3'utr CG1407 FlyBase G21609.1 AATCCAACAGATAAGTTGATTGGCGCTAGTCCCCTCGACACCACTAA 11 10030124 0.941018018 3 11 70 1 1.113943352 0 0.181818182 0.307692308 11 0 0 13 2R:10030097-10030143 6 CG1407 FBtr0300719 10029713 10031507 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 2R - 10030091 10030147 3'utr CG1407 FlyBase G16406.1 TGGCAATCCAACAGATAAGTTGATTGGCGCTAGTCCCCTCGACACCACTAACCATCA 9 10030124 0.970478575 3 9 55 1 1.146128036 0 0.555555556 0.714285714 9 0 0 14 2R:10030091-10030147 6 10 1110 FBgn0033474 835.29 47.03 72.28 0.01197189 0.212630236 0.138350858 6 6 6 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT 2R 10031100 10031105 - 2R_10031100_10031105_- 1 1 1 0 CG1407 FBtr0300719 10029713 10031507 2R - 10031086 10031131 5'utr CG1407 FlyBase G21610.1 GTATTTGGTGACGACTGGCAATACTGGTTCCTGCCCGTGTTTTCGA 7 10031107 0.754959742 5 7 56 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 2R:10031086-10031131 6 CG1407 FBtr0300719 10029713 10031507 GTTCCT 6mer2-7 dme-miR-276a-3p 2R - 10031089 10031137 5'utr CG1407 FlyBase G16407.1 TGCGAAGTATTTGGTGACGACTGGCAATACTGGTTCCTGCCCGTGTTTT 6 10031107 0.971774704 3 6 38 1 0.84509804 0.428571429 0.166666667 0.285714286 6 0 0 7 2R:10031089-10031137 6 4.5 1111 FBgn0033474 835.29 47.03 72.28 0.005387351 0.095683606 0.062257886 2 2 2 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 2R 10036098 10036104 - 2R_10036098_10036104_- 0.823349562 0.823349562 0.823349562 0 oys FBtr0345630|FBtr0088434|FBtr0339416|FBtr0345629 10034593|10035771|10035534|10035534 10036943|10036943|10036943|10036943 2R - 10036088 10036126 3'utr oys FlyBase G21617.1 AAGTCAACCAAATCCTAACTTTAGACTGAAGCTATTGAC 45 10036106 0.688415768 5 45 251 1 1.748188027 0 0.177777778 0.339285714 45 0 0 56 2R:10036088-10036126 7 oys FBtr0339416|FBtr0345629|FBtr0345630|FBtr0088434 10035534|10035534|10034593|10035771 10036943|10036943|10036943|10036943 AGACTGA 7mer-A1 dme-miR-14-3p 2R - 10036067 10036121 3'utr oys FlyBase G16412.1 AACCAAATCCTAACTTTAGACTGAAGCTATTGACATTTACTAAGCAAACAAAAAG 20 10036106 0.967176757 6 20 108 1 1.544068044 0 0.45 0.685714286 20 0 0 35 2R:10036067-10036121 7 32 1112 FBgn0033476 2953.663333 97.33666667 148.7366667 0.010834004 0.328755865 0.215145335 2 2 2 0.01 dme-miR-2535b-3p 6mer3-8 CCGTGA 2R 10050050 10050055 + 2R_10050050_10050055_+ 1 1 1 0 CoVIIc FBtr0088397|FBtr0339412|FBtr0088396|FBtr0339411 10049868|10049868|10049868|10049868 10050066|10050066|10050066|10050066 2R + 10049998 10050067 3'utr CoVIIc FlyBase G14523.1 CAGTGTGTTACAGCTTAAATTTAAGTAAAAAGTGGAAACGAAATAAAGTTACCCGTGACCGTAGAACCGA 15 10050053 0.959598494 8 14 67 0.9375 1.176091259 0.3125 0.066666667 0.125 15 1 0 15 2R:10049998-10050067 6 CoVIIc FBtr0088396|FBtr0339411|FBtr0088397|FBtr0339412 10049868|10049868|10049868|10049868 10050066|10050066|10050066|10050066 CCGTGA 6mer3-8 dme-miR-2535b-3p 2R + 10049968 10050065 3'utr CoVIIc FlyBase G11052.1 TTATCTGCTGAGTTGGCCGGCAGGCCATTACAGTGTGTTACAGCTTAAATTTAAGTAAAAAGTGGAAACGAAATAAAGTTACCCGTGACCGTAGAACC 19 10050059 0.921499353 10 17 89 0.84 1.322219295 0.28 0.263157895 0.44 19 4 0 21 2R:10049968-10050065 6 8.5 1113 FBgn0040773 467.34 157.2566667 240.2766667 0.018188043 0.054051763 0.035375886 -3 -9 -6 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 10071028 10071034 - 2R_10071028_10071034_- 0.661615645 0.661615645 0.661615645 0 CG1371 FBtr0088428 10070979 10071210 2R - 10070963 10071073 3'utr CG1371 FlyBase G21645.1 ATTTTTCACTTTCCATACATAGATTGAGGCAAGTTTATTTGTGTTCGTTATCCACTCTTATAGCTAAAATAAATAAATACAATTAAATAGATTAATTAGACAAGGCTGTTC 125 10071035 0.991200133 11 124 1316 0.993506494 2.184691431 0.181818182 0.16 0.318181818 125 1 0 153 2R:10070963-10071073 7 CG1371 FBtr0088428 10070979 10071210 TGTGTTC 7mer-m8 dme-miR-317-3p 2R - 10070995 10071064 3'utr CG1371 FlyBase G16436.1 TTTCCATACATAGATTGAGGCAAGTTTATTTGTGTTCGTTATCCACTCTTATAGCTAAAATAAATAAATA 71 10071035 0.851982903 7 70 724 0.99 1.995635195 0.18 0.323943662 0.52 71 1 0 99 2R:10070995-10071064 7 82 1114 FBgn0033482 1240.746667 38.63666667 59.06666667 0.066089237 2.122336295 1.388261851 1 1 1 0.01 dme-miR-1003-3p 7mer-A1 TGTGAGA 2R 10071122 10071128 - 2R_10071122_10071128_- 0.598382557 0.598382561 0.598382559 0 CG1371 FBtr0088428 10070979 10071210 2R - 10071111 10071177 3'utr CG1371 FlyBase G21647.1 AGTCACATTTCGAGGTATTCGCGGTAGGTATTCATTTGGTTTTTGTTTCTGTGAGATTTTGTTTAAC 28 10071131 0.668112048 12 25 342 0.947368421 1.255272505 0.447368421 0.25 0.447368421 28 1 1 36 2R:10071111-10071177 7 CG1371 FBtr0088428 10070979 10071210 TGTGAGA 7mer-A1 dme-miR-1003-3p 2R - 10071110 10071251 stop_codon CG1371 FlyBase G16438.1 AGATAAATGCCATCAAGAAGAAAAAGACCAAGAAGATTTAGTTCCGACTGATAGTCGCATTAGTTGTTCAATTTAGTCACATTTCGAGGTATTCGCGGTAGGTATTCATTTGGTTTTTGTTTCTGTGAGATTTTGTTTAACC 32 10071132 0.991875272 16 29 315 0.962264151 1.707570176 0.113207547 0.46875 0.679245283 32 2 0 51 2R:10071110-10071251 7 17 1115 FBgn0033482 1240.746667 38.63666667 59.06666667 0.013701427 0.439996549 0.287810384 3 4 3.5 0.01 dme-miR-980-3p 8mer-A1 GGCAGCTA 2R 10095831 10095838 + 2R_10095831_10095838_+ 0.668734347 0.668734347 0.668734347 0 CG2269 FBtr0088407|FBtr0305653|FBtr0088408|FBtr0088409 10095242|10095242|10095242|10095242 10096416|10096416|10096416|10096416 2R + 10095811 10095858 3'utr CG2269 FlyBase G14538.1 TGAAAGGCAGAGCTCACATTGGCAGCTAGTCCTCCAAAGTCACCGTCA 17 10095829 0.93294433 3 17 87 1 1.301029996 0.1 0.117647059 0.25 17 0 0 20 2R:10095811-10095858 8 CG2269 FBtr0088408|FBtr0088409|FBtr0088407|FBtr0305653 10095242|10095242|10095242|10095242 10096416|10096416|10096416|10096416 GGCAGCTA 8mer-A1 dme-miR-980-3p 2R + 10095810 10095857 3'utr CG2269 FlyBase G11062.1 ATGAAAGGCAGAGCTCACATTGGCAGCTAGTCCTCCAAAGTCACCGTC 8 10095829 0.968057719 3 8 43 1 1.146128036 0 0.5 0.714285714 8 0 0 14 2R:10095810-10095857 8 12.5 1116 FBgn0033484 2.333333333 0.08 0.12 5.357142857 156.25 104.1666667 2 2 2 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 2R 10098186 10098192 + 2R_10098186_10098192_+ 0.823349562 0.823349435 0.823349499 1.41E-07 Jra FBtr0088411|FBtr0088410 10098135|10098135 10098556|10098556 2R + 10098141 10098239 3'utr Jra FlyBase G14544.1 TGGAGTTGTCAGCCGGGGAGAATGATGAGGAGGACGTGGCACTGGAGACTGAAACCCCCTCGAATCCTGAAGATCCCGAGCAACCCATGCCTCTGGAAT 85 10098183 0.928845701 12 75 271 0.876190476 1.662757832 0.504761905 0.211764706 0.361904762 85 12 1 92 2R:10098141-10098239 7 Jra FBtr0088411|FBtr0088410 10098135|10098135 10098556|10098556 AGACTGA 7mer-A1 dme-miR-14-3p 2R + 10098141 10098296 3'utr Jra FlyBase G11067.1 TGGAGTTGTCAGCCGGGGAGAATGATGAGGAGGACGTGGCACTGGAGACTGAAACCCCCTCGAATCCTGAAGATCCCGAGCAACCCATGCCTCTGGAATTCTTTTCAAGTGCTAGCACCGGTGCCTTGGAGCTGGAGGGCTCGGCCTCTCAGGATA 137 10098183 0.958126917 11 113 546 0.816239316 1.201852121 0.534188034 0.467153285 0.688034188 137 32 11 191 2R:10098141-10098296 7 48.5 1117 FBgn0001291 1037.55 83.52666667 128.0966667 0.046744735 0.580652885 0.378620313 3 3 3 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 2R 10098489 10098494 + 2R_10098489_10098494_+ 1 1 1 0 Jra FBtr0088411|FBtr0088410 10098135|10098135 10098556|10098556 2R + 10098453 10098560 3'utr Jra FlyBase G14546.1 GTTATTAGTATAAGCTAGTGTTAATCAAGTATTATCTGTGTTGAACGTAAGATAATATGTAATGTACTTTTAAAATATACGTATATTTTCTGCACTTGATATATACAT 93 10098486 0.988045796 22 84 841 0.914529915 1.330413773 0.444444444 0.239130435 0.401709402 92 6 4 107 2R:10098453-10098560 6 Jra FBtr0088411|FBtr0088410 10098135|10098135 10098556|10098556 TGTGTT 6mer3-8 dme-miR-317-3p 2R + 10098313 10098546 3'utr Jra FlyBase G11068.1 CGAACTCCTGGAGGAGGAGAGCGATAACGAACAGCCTCTGGTGCTCTACATCCTCGCGGACGACGCAACCTGAGGCTTTGTGCCTTTCTTTGGTTTTAGCTGCAATATCTGAAATGCTTCTTAAGTGTTTTGTTTACTTAGTTATTAGTATAAGCTAGTGTTAATCAAGTATTATCTGTGTTGAACGTAAGATAATATGTAATGTACTTTTAAAATATACGTATATTTTCTGCA 109 10098487 0.989263631 39 93 869 0.875776398 0.973127854 0.329192547 0.376146789 0.577639752 109 6 14 141 2R:10098313-10098546 6 48.5 1118 FBgn0001291 1037.55 83.52666667 128.0966667 0.046744735 0.580652885 0.378620313 3 2 2.5 0.01 dme-miR-970-3p 6mer2-7 CTTATG 2R 10108425 10108430 + 2R_10108425_10108430_+ 0.999854874 1 0.999927437 0.000102601 14-3-3zeta FBtr0088418|FBtr0332917|FBtr0088412|FBtr0088414|FBtr0100183|FBtr0088416|FBtr0088419|FBtr0332916|FBtr0088415|FBtr0088417|FBtr0088413 10107621|10107621|10107621|10107621|10107621|10107621|10107621|10107621|10107621|10107621|10107621 10109687|10108474|10109687|10109687|10108474|10108474|10109687|10109687|10109687|10109687|10108474 2R + 10108378 10108462 3'utr 14-3-3zeta FlyBase G14563.1 CAACAACAACCAAGCGAACCAAATGAGAAAACAAAAATAAAAACAAACTTATGTATTATTTGTAATTCTTTTTCTAAACAAATAA 19 10108427 0.97542098 10 18 111 0.956521739 1.342422681 0.304347826 0.210526316 0.347826087 19 1 0 22 2R:10108378-10108462 6 14-3-3zeta FBtr0088419|FBtr0088416|FBtr0088417|FBtr0088413|FBtr0332916|FBtr0088415|FBtr0332917|FBtr0088414|FBtr0088418|FBtr0100183|FBtr0088412 10107621|10107621|10107621|10107621|10107621|10107621|10107621|10107621|10107621|10107621|10107621 10109687|10108474|10109687|10108474|10109687|10109687|10108474|10109687|10109687|10108474|10109687 CTTATG 6mer2-7 dme-miR-970-3p 2R + 10108410 10108466 3'utr 14-3-3zeta FlyBase G11085.1 AAAAATAAAAACAAACTTATGTATTATTTGTAATTCTTTTTCTAAACAAATAAAACC 14 10108426 0.848795061 7 12 124 0.904761905 0.977723605 0.285714286 0.357142857 0.571428571 14 1 1 19 2R:10108410-10108466 6 11 1119 FBgn0004907 11710.04 810.41 1245.203333 0.000939365 0.013573376 0.008833899 -2 -1 -1.5 0.01 dme-miR-34-5p 6mer3-8 CACTGC 2R 10137036 10137041 + 2R_10137036_10137041_+ 1 1 1 0 gem FBtr0346634|FBtr0089758|FBtr0339428|FBtr0089759 10137011|10137011|10137011|10137011 10137472|10137472|10137472|10137472 2R + 10136948 10137059 stop_codon gem FlyBase G14608.1 ACGCGCTGGAGGTGCAGGCCGGCAAGGTGATCCTTAAGCTGATCAACAAGCAGGACAACAACTAAGCGATGTTCTGGCAACGCGTATGCACTGCAGTAGAGACCACCCGAGC 18 10137037 0.946080813 8 16 63 0.9 1.255272505 0.35 0.111111111 0.2 18 2 0 18 2R:10136948-10137059 6 gem FBtr0339428|FBtr0089759|FBtr0346634|FBtr0089758 10137011|10137011|10137011|10137011 10137472|10137472|10137472|10137472 CACTGC 6mer3-8 dme-miR-34-5p 2R + 10136979 10137107 stop_codon gem FlyBase G11114.1 CCTTAAGCTGATCAACAAGCAGGACAACAACTAAGCGATGTTCTGGCAACGCGTATGCACTGCAGTAGAGACCACCCGAGCAATCAAGTATAGTTTATAGCATTTACACGCAGTAAGATGGCACATCGA 13 10137034 0.96976766 10 12 70 0.9375 1.176091259 0.125 0.153846154 0.3125 13 1 0 15 2R:10136979-10137107 6 6.5 1120 FBgn0050011 3271.46 66.12333333 101.57 0.00198688 0.098301154 0.063995274 -1 2 0.5 0.01 dme-miR-277-3p 7mer-A1 GCATTTA 2R 10137078 10137084 + 2R_10137078_10137084_+ 0.823349562 0.823349562 0.823349562 0 gem FBtr0346634|FBtr0089758|FBtr0339428|FBtr0089759 10137011|10137011|10137011|10137011 10137472|10137472|10137472|10137472 2R + 10137064 10137168 3'utr gem FlyBase G14609.1 AAGTATAGTTTATAGCATTTACACGCAGTAAGATGGCACATCGAAACCGTTTTCTATATAGGTTTTAATTTGTATGAGATTTCGCGCAGCAATTTTGAACAAGTA 27 10137075 0.830986318 14 24 239 0.903225806 1.146128036 0.258064516 0.148148148 0.258064516 27 2 1 28 2R:10137064-10137168 7 gem FBtr0339428|FBtr0089759|FBtr0346634|FBtr0089758 10137011|10137011|10137011|10137011 10137472|10137472|10137472|10137472 GCATTTA 7mer-A1 dme-miR-277-3p 2R + 10136979 10137107 stop_codon gem FlyBase G11114.1 CCTTAAGCTGATCAACAAGCAGGACAACAACTAAGCGATGTTCTGGCAACGCGTATGCACTGCAGTAGAGACCACCCGAGCAATCAAGTATAGTTTATAGCATTTACACGCAGTAAGATGGCACATCGA 13 10137096 0.96976766 10 12 70 0.9375 1.176091259 0.125 0.153846154 0.3125 13 1 0 15 2R:10136979-10137107 7 7 1121 FBgn0050011 3271.46 66.12333333 101.57 0.002139717 0.105862782 0.068917988 3 -18 -7.5 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA 2R 10137220 10137225 + 2R_10137220_10137225_+ 1 1 1 0 gem FBtr0346634|FBtr0089758|FBtr0339428|FBtr0089759 10137011|10137011|10137011|10137011 10137472|10137472|10137472|10137472 2R + 10137172 10137239 3'utr gem FlyBase G14610.1 AGCAAGCAGCCTCTAACCCTGTTCCCTAAAATCTTTGTTAAAGAACTAGTGCAAAATATTTAAGTTTC 59 10137218 0.919208087 6 56 351 0.973684211 1.568201724 0 0.220338983 0.394736842 59 1 1 74 2R:10137172-10137239 6 gem FBtr0339428|FBtr0089759|FBtr0346634|FBtr0089758 10137011|10137011|10137011|10137011 10137472|10137472|10137472|10137472 GTGCAA 6mer3-8 dme-miR-92b-3p 2R + 10137114 10137238 3'utr gem FlyBase G11115.1 TTTCTATATAGGTTTTAATTTGTATGAGATTTCGCGCAGCAATTTTGAACAAGTAAAAAGCAAGCAGCCTCTAACCCTGTTCCCTAAAATCTTTGTTAAAGAACTAGTGCAAAATATTTAAGTTT 30 10137218 0.9808813 7 27 193 0.911764706 1.491361694 0.088235294 0.172413793 0.294117647 29 3 0 31 2R:10137114-10137238 6 28 1122 FBgn0050011 3271.46 66.12333333 101.57 0.00855887 0.423451127 0.27567195 2 2 2 0.01 dme-miR-190-5p 6mer3-8 ACATAT 2R 10137307 10137312 + 2R_10137307_10137312_+ 1 1 1 0 gem FBtr0346634|FBtr0089758|FBtr0339428|FBtr0089759 10137011|10137011|10137011|10137011 10137472|10137472|10137472|10137472 2R + 10137269 10137360 3'utr gem FlyBase G14611.1 ATTTTATATGTATTTTATACCACCTACGATATACGACTACATATGCACATTTAATTCTCCGATGCGATTGGATTTCGATTCGTTCTTTTCCT 26 10137336 0.985876601 12 23 183 0.970588235 1.51851394 0.058823529 0.230769231 0.411764706 26 1 0 33 2R:10137269-10137360 6 gem FBtr0339428|FBtr0089759|FBtr0346634|FBtr0089758 10137011|10137011|10137011|10137011 10137472|10137472|10137472|10137472 ACATAT 6mer3-8 dme-miR-190-5p 2R + 10137286 10137360 3'utr gem FlyBase G11116.1 TACCACCTACGATATACGACTACATATGCACATTTAATTCTCCGATGCGATTGGATTTCGATTCGTTCTTTTCCT 12 10137336 0.986712973 5 9 107 0.75 0.77815125 0 0.333333333 0.5 12 3 1 12 2R:10137286-10137360 6 7 1123 FBgn0050011 3271.46 66.12333333 101.57 0.002139717 0.105862782 0.068917988 -29 -29 -29 0.01 dme-miR-317-3p 8mer-A1 TGTGTTCA 2R 10145966 10145973 - 2R_10145966_10145973_- 0.631136783 0.631136783 0.631136783 0 KCNQ FBtr0310097|FBtr0310094|FBtr0299833|FBtr0301443|FBtr0310096|FBtr0310093|FBtr0310095|FBtr0301444 10145895|10145895|10145895|10145895|10145895|10145895|10145895|10145895 10146074|10146074|10146074|10146074|10146074|10146074|10146074|10146074 2R - 10145934 10145989 3'utr KCNQ FlyBase G21678.1 ATTTTGGGACATCATTTGTGTTCAATTAATTGGTAGCAAACAAATGAAAATCAAAC 6 10145974 0.990604435 3 6 60 1 0.77815125 0.166666667 0 0 6 0 0 6 2R:10145934-10145989 8 KCNQ FBtr0310096|FBtr0310093|FBtr0310095|FBtr0301444|FBtr0310097|FBtr0310094|FBtr0299833|FBtr0301443 10145895|10145895|10145895|10145895|10145895|10145895|10145895|10145895 10146074|10146074|10146074|10146074|10146074|10146074|10146074|10146074 TGTGTTCA 8mer-A1 dme-miR-317-3p 2R - 10145935 10145988 3'utr KCNQ FlyBase G16451.1 TTTTGGGACATCATTTGTGTTCAATTAATTGGTAGCAAACAAATGAAAATCAAA 7 10145974 0.987785899 4 7 55 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 2R:10145935-10145988 8 4.5 1124 FBgn0033494 83.10666667 3.453333333 5.296666667 0.054147281 1.303088803 0.849590938 1 1 1 0.01 dme-bantam-3p 6mer3-8 TGATCT 2R 10156573 10156578 - 2R_10156573_10156578_- 0.999999591 0.999507652 0.999753621 0.000347826 mlt FBtr0088370|FBtr0331945|FBtr0088369 10156388|10155914|10156388 10156669|10156669|10156669 2R - 10156567 10156607 3'utr mlt FlyBase G21682.1 CTTCGTCCCCCGCCTGGTGCTACAACTTGTGATCTTGTACA 18 10156581 0.64123762 6 18 151 1 1.397940009 0.4 0.333333333 0.52 18 0 0 25 2R:10156567-10156607 6 mlt FBtr0331945|FBtr0088369|FBtr0088370 10155914|10156388|10156388 10156669|10156669|10156669 TGATCT 6mer3-8 dme-bantam-3p 2R - 10156569 10156592 3'utr mlt FlyBase G16454.1 GGTGCTACAACTTGTGATCTTGTA 10 10156572 0.675230975 4 8 74 0.833333333 0.698970004 0.416666667 0.2 0.333333333 10 1 1 10 2R:10156569-10156592 6 14 1125 FBgn0265512 12.66666667 0.613333333 0.95 1.105263158 22.82608696 14.73684211 3 -6 -1.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2R 10306721 10306727 + 2R_10306721_10306727_+ 0.823349561 0.823349562 0.823349562 0 CAP FBtr0088345|FBtr0088346|FBtr0306691|FBtr0088343|FBtr0088338|FBtr0301131|FBtr0336696|FBtr0088341|FBtr0306690|FBtr0088344|FBtr0301965|FBtr0088340|FBtr0299829|FBtr0336694|FBtr0299828|FBtr0299825|FBtr0088339|FBtr0088342|FBtr0336695|FBtr0088347|FBtr0299826 10306312|10306312|10306312|10306312|10306312|10306312|10306312|10306312|10306312|10306312|10306312|10306312|10306312|10306312|10306312|10306312|10306312|10306312|10306312|10306312|10306312 10307024|10307024|10307024|10307024|10307024|10307024|10307024|10307024|10307024|10307024|10307024|10307024|10307024|10307024|10307024|10307024|10307024|10307024|10307024|10307024|10307024 2R + 10306667 10306748 3'utr CAP FlyBase G14629.1 ATTAAGATCATACATACATACATATGTACTTTGTCGTTTACCTACTAATTTTAACTAGTCACAGCTAATTTCCAAAAAGAAT 20 10306736 0.974267158 6 20 124 1 1.361727836 0.130434783 0.15 0.260869565 20 0 0 23 2R:10306667-10306748 7 CAP FBtr0299828|FBtr0088339|FBtr0299825|FBtr0088342|FBtr0299829|FBtr0088347|FBtr0306688|FBtr0336695|FBtr0301965|FBtr0299826|FBtr0088340|FBtr0336694|FBtr0088346|FBtr0088341|FBtr0088343|FBtr0088344|FBtr0336696|FBtr0088345|FBtr0306691|FBtr0306690|FBtr0088338|FBtr0301131 10306312|10306312|10306312|10306312|10306312|10306312|10306312|10306312|10306312|10306312|10306312|10306312|10306312|10306312|10306312|10306312|10306312|10306312|10306312|10306312|10306312|10306312 10307024|10307024|10307024|10307024|10307024|10307024|10306739|10307024|10307024|10307024|10307024|10307024|10307024|10307024|10307024|10307024|10307024|10307024|10307024|10307024|10307024|10307024 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R + 10306716 10306749 3'utr CAP FlyBase G11131.1 TTTAACTAGTCACAGCTAATTTCCAAAAAGAATA 8 10306736 0.689722603 3 8 37 1 1.176091259 0 0.375 0.666666667 8 0 0 15 2R:10306716-10306749 7 11.5 1126 FBgn0033504 514.4066667 17.85333333 27.51 0.022355853 0.644137416 0.418029807 -15 -15 -15 0.01 dme-miR-283-5p 8mer-m1 TGATATTT 2R 10307099 10307106 - 2R_10307099_10307106_- 0.549923681 0.554071807 0.551997744 0.00293315 JhI-1 FBtr0088360 10307028 10307304 2R - 10307089 10307145 3'utr JhI-1 FlyBase G21693.1 AATTAATAGGGCACCTTTGCTTGTATCTGTATATGCTTGTGATATTTGCATTTGCAT 26 10307109 0.993419074 8 22 278 0.805555556 0.763427994 0.194444444 0.346153846 0.527777778 26 3 4 29 2R:10307089-10307145 8 JhI-1 FBtr0088360 10307028 10307304 TGATATTT 8mer-m1 dme-miR-283-5p 2R - 10307090 10307121 3'utr JhI-1 FlyBase G16459.1 ATCTGTATATGCTTGTGATATTTGCATTTGCA 15 10307109 0.675132212 6 13 142 0.857142857 0.653212514 0.19047619 0.333333333 0.523809524 15 0 3 18 2R:10307090-10307121 8 18.5 1127 FBgn0028426 503.2766667 22.61333333 34.73333333 0.036759105 0.818101415 0.532629559 3 3 3 0.01 dme-miR-970-3p 7mer-m8 TCTTATG 2R 10307242 10307248 - 2R_10307242_10307248_- 0.658999343 0.658999343 0.658999343 0 JhI-1 FBtr0088360 10307028 10307304 2R - 10307180 10307273 3'utr JhI-1 FlyBase G21694.1 AAGTTACTCAAGGAGCTACTGTTAATCTTATGTCAGAGTTGAGTGGTATTTGTTAAGTTTAATGTTATTTCTTGAAACCATAAAATTTGCCCAA 11 10307234 0.990708684 5 11 108 1 1.113943352 0.153846154 0.181818182 0.307692308 11 0 0 13 2R:10307180-10307273 7 JhI-1 FBtr0088360 10307028 10307304 TCTTATG 7mer-m8 dme-miR-970-3p 2R - 10307214 10307263 3'utr JhI-1 FlyBase G16460.1 AGGAGCTACTGTTAATCTTATGTCAGAGTTGAGTGGTATTTGTTAAGTTT 12 10307234 0.989746586 5 11 103 0.941176471 1.204119983 0 0.25 0.470588235 12 1 0 16 2R:10307214-10307263 7 7.5 1128 FBgn0028426 503.2766667 22.61333333 34.73333333 0.01490234 0.331662736 0.215930902 -14 -14 -14 0.01 dme-miR-986-5p 7mer-A1 TTCGAGA 2R 10435706 10435712 + 2R_10435706_10435712_+ 0.823349562 0.823349562 0.823349562 0 RanBPM FBtr0088262|FBtr0100460|FBtr0306247|FBtr0088263 10435221|10435221|10435221|10435221 10436416|10436581|10436581|10436581 2R + 10435686 10435741 3'utr RanBPM FlyBase G14657.2 TCGTCGATCCGCAGGACTTCTTCGAGACACTGGACTAAATTTAGATTATTTACAAT 415 10435716 0.967096361 7 408 3151 0.984682713 2.176091259 0.015317287 0.091566265 0.175054705 415 5 2 450 2R:10435686-10435741 7 RanBPM FBtr0306247|FBtr0088263|FBtr0100460|FBtr0088262 10435221|10435221|10435221|10435221 10436581|10436581|10436581|10436416 TTCGAGA 7mer-A1 dme-miR-986-5p 2R + 10435666 10435741 3'utr RanBPM FlyBase G11156.1 AAACAGCAGCCCATCGATGTTCGTCGATCCGCAGGACTTCTTCGAGACACTGGACTAAATTTAGATTATTTACAAT 287 10435716 0.98403498 8 283 2085 0.992592593 2.604226053 0.022222222 0.324041812 0.520987654 287 3 0 402 2R:10435666-10435741 7 340 1129 FBgn0262114 1559 49.81 76.34333333 0.218088518 6.825938567 4.453565035 -10 -10 -10 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT 2R 10436109 10436114 + 2R_10436109_10436114_+ 0.999958654 1 0.999979327 2.92E-05 RanBPM FBtr0088262|FBtr0346961|FBtr0100460|FBtr0330614|FBtr0306247|FBtr0088263 10435221|10435722|10435221|10435722|10435221|10435221 10436416|10436581|10436581|10436166|10436581|10436581 2R + 10436100 10436147 3'utr RanBPM FlyBase G14660.1 TGGAGCAAAAGCTGTTCAATCATCTCCTTAGCATGTTAATATAGAACC 19 10436127 0.893812228 5 19 145 1 1.380211242 0.416666667 0.210526316 0.375 19 0 0 24 2R:10436100-10436147 6 RanBPM FBtr0306247|FBtr0088263|FBtr0100460|FBtr0330614|FBtr0088262|FBtr0346961 10435221|10435221|10435221|10435722|10435221|10435722 10436581|10436581|10436581|10436166|10436416|10436581 AGCTGT 6mer3-8 dme-miR-1008-3p 2R + 10436070 10436137 3'utr RanBPM FlyBase G11159.1 AATCTAGAATTGATAGTGAAGGGACTAGCCTGGAGCAAAAGCTGTTCAATCATCTCCTTAGCATGTTA 11 10436127 0.988353504 4 9 71 0.909090909 1 0.181818182 0.1 0.181818182 10 1 0 10 2R:10436070-10436137 6 11 1130 FBgn0262114 1559 49.81 76.34333333 0.007055805 0.220839189 0.144085928 -18 -18 -18 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2R 10436240 10436245 + 2R_10436240_10436245_+ 1 1 1 0 RanBPM FBtr0088262|FBtr0346961|FBtr0100460|FBtr0306247|FBtr0088263 10435221|10435722|10435221|10435221|10435221 10436416|10436581|10436581|10436581|10436581 2R + 10436187 10436248 3'utr RanBPM FlyBase G14661.1 TCCGTGTTTTCAGCGATTTTCGATGGACTCCGCGCCATCCCGTGTCTTGTGGCAAGACTAAG 7 10436210 0.9726802 5 7 44 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 2R:10436187-10436248 6 RanBPM FBtr0306247|FBtr0088263|FBtr0100460|FBtr0088262|FBtr0346961 10435221|10435221|10435221|10435221|10435722 10436581|10436581|10436581|10436416|10436581 AAGACT 6mer3-8 dme-miR-14-3p 2R + 10436205 10436254 3'utr RanBPM FlyBase G11160.1 TTCGATGGACTCCGCGCCATCCCGTGTCTTGTGGCAAGACTAAGCAAAAG 6 10436234 0.960692312 3 6 29 1 1.041392685 0.545454545 0.5 0.727272727 6 0 0 11 2R:10436205-10436254 6 3 1131 FBgn0262114 1559 49.81 76.34333333 0.00192431 0.06022887 0.039296162 30 6 18 0.01 dme-miR-932-5p 6mer2-7 GAATTG 2R 10463373 10463378 + 2R_10463373_10463378_+ 1 1 1 0 Galphao FBtr0088266|FBtr0088272 10461699|10461699 10463718|10465701 2R + 10463305 10463403 3'utr Galphao FlyBase G14663.1 AACATCTTCATACATGTACCTATGTATGTGACTGTATCTAGCGAATGGCATTTAACCCCAAGTATGTTGAATTGTTTGATTAGACTTATTATTATAATT 16 10463384 0.994539873 7 15 190 0.9375 0.875061263 0 0 0 16 0 1 15 2R:10463305-10463403 6 Galphao FBtr0088266|FBtr0088272 10461699|10461699 10463718|10465701 GAATTG 6mer2-7 dme-miR-932-5p 2R + 10463308 10463404 3'utr Galphao FlyBase G11163.1 ATCTTCATACATGTACCTATGTATGTGACTGTATCTAGCGAATGGCATTTAACCCCAAGTATGTTGAATTGTTTGATTAGACTTATTATTATAATTA 21 10463384 0.964062722 7 21 228 1 1.544068044 0.057142857 0.523809524 0.714285714 21 0 0 35 2R:10463308-10463404 6 9.5 1132 FBgn0001122 974.5933333 34.4 53.06333333 0.009747655 0.276162791 0.179031346 -11 -11 -11 0.01 dme-miR-965-3p 8mer-A1 TACGCTTA 2R 10469472 10469479 + 2R_10469472_10469479_+ 0.625364919 0.625364919 0.625364919 0 CG11777 FBtr0088273 10469445 10469643 2R + 10469375 10469489 stop_codon CG11777 FlyBase G14666.1 AAGAACTATCGTCCCCATGTGGACAAGAAGATCAATGGAGTAACTATACATGCCAATCCTTTGGCGACGTGATAGAGATAGAGACAAAGGCCAATCGTACGCTTAAAATGAAATA 26 10469470 0.94123465 13 26 99 1 1.491361694 0.129032258 0.192307692 0.322580645 26 0 0 31 2R:10469375-10469489 8 CG11777 FBtr0088273 10469445 10469643 TACGCTTA 8mer-A1 dme-miR-965-3p 2R + 10469432 10469486 stop_codon CG11777 FlyBase G11166.1 CCTTTGGCGACGTGATAGAGATAGAGACAAAGGCCAATCGTACGCTTAAAATGAA 17 10469471 0.907770258 4 13 57 0.857142857 0.954242509 0.142857143 0.235294118 0.380952381 17 2 1 18 2R:10469432-10469486 8 8.5 1133 FBgn0033527 170.1366667 31.64666667 48.74 0.049959836 0.268590689 0.174394748 2 1 1.5 0.01 dme-miR-92b-3p 7mer-m1 TGCAATT 2R 10469618 10469624 - 2R_10469618_10469624_- 0.765586662 0.765586663 0.765586663 0 whd FBtr0088308|FBtr0088307|FBtr0301281|FBtr0301282 10469471|10469471|10469471|10469471 10469762|10469762|10469762|10469762 2R - 10469523 10469730 3'utr whd FlyBase G21717.1 TAGCATTTGTTTTTACCCCCCTAGTTGGTCGTTTTAAACACATCTGATACATCCGTCTAGTTCGAAATGAAGTGCAAAAGTCGTCGTGAGAGTTATACATAAACAATGCAATTTTTTATAAACAATTGTGACTTGGCTGGTTTTAAGATTTAGTCTTTAGATACTTTTGCACAATATTTGATGTTTCTCAATCAATTAGTCTGTAATC 253 10469599 0.987346283 39 236 2062 0.928802589 1.855821905 0.097087379 0.177865613 0.326860841 253 19 3 287 2R:10469523-10469730 7 whd FBtr0301281|FBtr0301282|FBtr0088308|FBtr0088307 10469471|10469471|10469471|10469471 10469762|10469762|10469762|10469762 TGCAATT 7mer-m1 dme-miR-92b-3p 2R - 10469483 10469621 3'utr whd FlyBase G16476.1 AATTTTTTATAAACAATTGTGACTTGGCTGGTTTTAAGATTTAGTCTTTAGATACTTTTGCACAATATTTGATGTTTCTCAATCAATTAGTCTGTAATCGAAGAAATCGCGTAACCTTAAGTGCTATAAATATATTTCA 141 10469598 0.98700871 25 134 1190 0.958715596 2.01911629 0.119266055 0.439716312 0.637614679 141 8 1 209 2R:10469483-10469621 4 17.5 1134 FBgn0261862 690.54 28.43666667 43.09666667 0.025342486 0.615402649 0.406063887 -25 -26 -25.5 0.01 dme-miR-79-3p 7mer-m8 TAGCTTT 2R 10481725 10481731 + 2R_10481725_10481731_+ 0.620204031 0.620204031 0.620204031 0 CG17765 FBtr0088274 10481588 10481886 2R + 10481680 10481746 3'utr CG17765 FlyBase G14674.1 ATAAATTTCGCGACTGGTGCATTTTTCTTAAATTTTCAACGGTGTTAGCTTTTTAATATGTAAATGA 21 10481725 0.985758717 5 20 211 0.962962963 1.414973348 0.111111111 0.19047619 0.37037037 21 1 0 26 2R:10481680-10481746 7 CG17765 FBtr0088274 10481588 10481886 TAGCTTT 7mer-m8 dme-miR-79-3p 2R + 10481660 10481855 3'utr CG17765 FlyBase G11170.1 ACAGCCAACAGTGGATGATCATAAATTTCGCGACTGGTGCATTTTTCTTAAATTTTCAACGGTGTTAGCTTTTTAATATGTAAATGAATCACTCCACAGTCATATTGCAATCTCCTGGTATCAGAATCAAATTTCAAAAGTATTTGTTAACGCAGTTCGACTCAATAATCATAGTACAAAGTCTCTTGCGCCTAAT 36 10481724 0.984866267 19 35 289 0.98 1.69019608 0.12 0.25 0.46 36 1 0 49 2R:10481660-10481855 7 14.5 1135 FBgn0033529 2313.66 293.68 451.0566667 0.006267127 0.049373468 0.032146737 0 1 0.5 0.01 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 10481832 10481839 + 2R_10481832_10481839_+ 0.605654138 0.605654138 0.605654138 0 CG17765 FBtr0088274 10481588 10481886 2R + 10481747 10481856 3'utr CG17765 FlyBase G14674.2 ATCACTCCACAGTCATATTGCAATCTCCTGGTATCAGAATCAAATTTCAAAAGTATTTGTTAACGCAGTTCGACTCAATAATCATAGTACAAAGTCTCTTGCGCCTAATA 47 10481830 0.979817235 12 44 323 0.948275862 1.740362689 0.103448276 0.191489362 0.344827586 47 3 0 55 2R:10481747-10481856 8 CG17765 FBtr0088274 10481588 10481886 AGTACAAA 8mer-A1 dme-miR-305-5p 2R + 10481660 10481855 3'utr CG17765 FlyBase G11170.1 ACAGCCAACAGTGGATGATCATAAATTTCGCGACTGGTGCATTTTTCTTAAATTTTCAACGGTGTTAGCTTTTTAATATGTAAATGAATCACTCCACAGTCATATTGCAATCTCCTGGTATCAGAATCAAATTTCAAAAGTATTTGTTAACGCAGTTCGACTCAATAATCATAGTACAAAGTCTCTTGCGCCTAAT 36 10481830 0.984866267 19 35 289 0.98 1.69019608 0.12 0.25 0.46 36 1 0 49 2R:10481660-10481855 8 22 1136 FBgn0033529 2313.66 293.68 451.0566667 0.009508744 0.074911468 0.048774359 2 2 2 0.01 dme-miR-283-5p 6mer3-8 TGATAT 2R 10482375 10482380 - 2R_10482375_10482380_- 1 1 1 0 lola FBtr0089347|FBtr0089357 10481892|10482205 10482939|10482939 2R - 10482323 10482382 5'utr lola FlyBase G21733.1 AATGATATACATTATGACTGAATTAGTTAAGAGAATTGCATTGAACTGACAACTGAACAA 10 10482371 0.7654728 6 10 81 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 2R:10482323-10482382 6 lola FBtr0089347|FBtr0089357 10481892|10482205 10482939|10482939 TGATAT 6mer3-8 dme-miR-283-5p 2R - 10482317 10482407 5'utr lola FlyBase G16489.1 GATAAGCTCAATCGATGCCATTTACAATGATATACATTATGACTGAATTAGTTAAGAGAATTGCATTGAACTGACAACTGAACAAACCATT 14 10482370 0.984006072 7 14 104 1 1.255272505 0.277777778 0.214285714 0.388888889 14 0 0 18 2R:10482317-10482407 6 7 1137 FBgn0005630 6593.74 266.74 407.4566667 0.001061613 0.026242783 0.017179741 -9 -10 -9.5 0.01 dme-miR-31a-5p 8mer-A1 TCTTGCCA 2R 10491536 10491543 - 2R_10491536_10491543_- 0.631136385 0.631136385 0.631136385 0 lola FBtr0089361 10491258 10491941 2R - 10491523 10491581 5'utr lola FlyBase G21738.1 TAGTTCTACTGTGGTTGGTGTTCTCAAAACTCAAATATTCTTGCCAGCAATTAGGGCTT 11 10491544 0.982935464 5 10 82 0.916666667 1.041392685 0.083333333 0.090909091 0.166666667 11 1 0 11 2R:10491523-10491581 8 lola FBtr0089361 10491258 10491941 TCTTGCCA 8mer-A1 dme-miR-31a-5p 2R - 10491534 10491578 5'utr lola FlyBase G16492.1 TTCTACTGTGGTTGGTGTTCTCAAAACTCAAATATTCTTGCCAGC 6 10491544 0.982279788 3 5 40 0.888888889 0.602059991 0 0.333333333 0.555555556 6 0 1 8 2R:10491534-10491578 8 5.5 1138 FBgn0005630 6593.74 266.74 407.4566667 0.000834124 0.02061933 0.013498368 1 1 1 0.01 dme-bantam-3p 8mer-A1 TGATCTCA 2R 10496614 10496621 - 2R_10496614_10496621_- 0.631136385 0.631136385 0.631136385 0 lola FBtr0089360 10496293 10497178 2R - 10496594 10496646 5'utr lola FlyBase G21752.1 TGTATAAATCCTTAGGAAAACTCAATGATCTCAATGAACTTTTTCTTGATTTT 473 10496621 0.767112619 8 457 2259 0.964028777 1.72916479 0.215827338 0.150105708 0.276978417 473 11 9 536 2R:10496594-10496646 8 lola FBtr0089360 10496293 10497178 TGATCTCA 8mer-A1 dme-bantam-3p 2R - 10496595 10496650 5'utr lola FlyBase G16503.1 GATGTGTATAAATCCTTAGGAAAACTCAATGATCTCAATGAACTTTTTCTTGATTT 375 10496621 0.763432461 6 366 1827 0.97810219 2.030194785 0.260948905 0.309333333 0.527372263 375 8 4 536 2R:10496595-10496650 8 422.5 1139 FBgn0005630 6593.74 266.74 407.4566667 0.064075927 1.583939417 1.036920081 0 0 0 0.01 dme-bantam-3p 6mer3-8 TGATCT 2R 10496953 10496958 - 2R_10496953_10496958_- 1 1 1 0 lola FBtr0089360 10496293 10497178 2R - 10496929 10497062 5'utr lola FlyBase G21753.1 AGGTTTCGGGTCCTTAGTGCCGGGTTTGCTTCAGTCTGAGTCCAAAGTCCTAATCACACAGAGTTCAGTCCAGTCCAGAGCGCGGTTTTGTGTAATTTTCCAAATGATCTTGAAACATATAGTCGTCTTTACAC 125 10496958 0.979930108 14 122 852 0.979310345 2.152288344 0.103448276 0.152 0.268965517 125 3 0 142 2R:10496929-10497062 6 lola FBtr0089360 10496293 10497178 TGATCT 6mer3-8 dme-bantam-3p 2R - 10496931 10497019 5'utr lola FlyBase G16504.1 AAAGTCCTAATCACACAGAGTTCAGTCCAGTCCAGAGCGCGGTTTTGTGTAATTTTCCAAATGATCTTGAAACATATAGTCGTCTTTAC 95 10496958 0.846201207 12 95 650 1 2.100370545 0.023809524 0.273684211 0.452380952 95 0 0 126 2R:10496931-10497019 6 87 1140 FBgn0005630 6593.74 266.74 407.4566667 0.013194333 0.326160306 0.213519638 0 0 0 0.01 dme-miR-282-5p 6mer2-7 GAGGCT 2R 10507648 10507653 - 2R_10507648_10507653_- 1 1 1 0 lola FBtr0343132|FBtr0089350 10507241|10507421 10508346|10508346 2R - 10507630 10507688 5'utr lola FlyBase G21774.1 AAAAATTGAAGAAAATTGTAAACTTATCTATATTGGAGGCTTGCAAAAATAATTTTGTA 106 10507655 0.982049653 8 104 801 0.985507246 2.133538908 0 0.283018868 0.449275362 106 2 0 136 2R:10507630-10507688 6 lola FBtr0089350|FBtr0343132 10507421|10507241 10508346|10508346 GAGGCT 6mer2-7 dme-miR-282-5p 2R - 10507625 10507671 5'utr lola FlyBase G16523.1 GTAAACTTATCTATATTGGAGGCTTGCAAAAATAATTTTGTAAGAAT 81 10507655 0.799882612 4 79 595 1 2.08278537 0.008264463 0.3875 0.595041322 80 0 0 121 2R:10507625-10507671 6 91 1141 FBgn0005630 6593.74 266.74 407.4566667 0.013800969 0.341156182 0.223336633 2 2 2 0.01 dme-miR-1006-3p 8mer-A1 CGAATTTA 2R 10515275 10515282 - 2R_10515275_10515282_- 0.671697512 0.671697512 0.671697512 0 lola FBtr0089348 10515012 10515540 2R - 10515233 10515285 5'utr lola FlyBase G21802.1 AAACGAATTTATTGGATGCCACATCATTTATAAAGGAAATGGATAAAAAAAAA 11 10515274 0.988323061 5 8 70 0.6875 1.041392685 0.1875 0.454545455 0.625 11 5 0 11 2R:10515233-10515285 8 lola FBtr0089348 10515012 10515540 CGAATTTA 8mer-A1 dme-miR-1006-3p 2R - 10515251 10515284 5'utr lola FlyBase G16539.1 AACGAATTTATTGGATGCCACATCATTTATAAAG 9 10515273 0.708628328 2 9 58 1 1.079181246 0.25 0.333333333 0.5 9 0 0 12 2R:10515251-10515284 8 9 1142 FBgn0005630 6593.74 266.74 407.4566667 0.001364931 0.033740721 0.022088238 -8 -9 -8.5 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA 2R 10515463 10515468 - 2R_10515463_10515468_- 1 0.993054511 0.996527256 0.00491121 lola FBtr0089348 10515012 10515540 2R - 10515423 10515601 stop_codon lola FlyBase G21804.1 ACAAAGCTCCCACCTAAAGCGACACCTTGAGAGCGGTGTCTGTGTCAAATATTACTTATGAGATAATGTTTTCTTTAAAATCAAATAGAATAAGCGTTATCCCAATAGGCAGAAGATCAACTGATGATCGAAATGATGATCATGAAAATGAAGATGTAGAACATGAACAAGATTATATA 38 10515467 0.969055673 16 37 211 0.97826087 1.653212514 0.239130435 0.184210526 0.326086957 38 1 0 45 2R:10515423-10515601 6 lola FBtr0089348 10515012 10515540 TGATGA 6mer3-8 dme-miR-2a-2-5p 2R - 10515452 10515495 5'utr lola FlyBase G16540.1 AGGCAGAAGATCAACTGATGATCGAAATGATGATCATGAAAATG 6 10515467 0.944063275 3 6 26 1 0.954242509 0.333333333 0.333333333 0.555555556 6 0 0 9 2R:10515452-10515495 6 8 1143 FBgn0005630 6593.74 266.74 407.4566667 0.001213272 0.029991752 0.01963399 -1 -1 -1 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2R 10522258 10522263 - 2R_10522258_10522263_- 0.999639724 1 0.999819862 0.000254771 lola FBtr0100286 10522026 10522334 2R - 10522194 10522282 5'utr lola FlyBase G21816.1 CTACATAAAACATGCTTATTCTAGTTAAGAAACGTTGTTTAATCTCGCTCTATTGTTCTGTGTCTCTGCTAAGTCAATATCTGAAGTTA 18 10522266 0.834350807 7 13 144 0.72 0.653212514 0.12 0.277777778 0.48 18 4 3 18 2R:10522194-10522282 6 lola FBtr0100286 10522026 10522334 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2R - 10522201 10522279 5'utr lola FlyBase G16551.1 CATAAAACATGCTTATTCTAGTTAAGAAACGTTGTTTAATCTCGCTCTATTGTTCTGTGTCTCTGCTAAGTCAATATCT 11 10522264 0.984226573 7 10 89 1 1.113943352 0.076923077 0.3 0.461538462 10 0 0 13 2R:10522201-10522279 6 5 1144 FBgn0005630 6593.74 266.74 407.4566667 0.000758295 0.018744845 0.012271244 3 1 2 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2R 10615442 10615447 + 2R_10615442_10615447_+ 1 1 1 0 psq FBtr0088278|FBtr0346958|FBtr0088282|FBtr0330607|FBtr0100606|FBtr0088281|FBtr0088277|FBtr0088276|FBtr0088275|FBtr0100607|FBtr0088280|FBtr0088279 10614840|10614840|10614840|10615080|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840 10616248|10617280|10616248|10617280|10616248|10616248|10616248|10616248|10616248|10616248|10616248|10616248 2R + 10615251 10615469 3'utr psq FlyBase G14694.1 ATATATGAATGACCCACAGACAAAAAATTCCCAAGGGTAGGATAAAGCAATCACAAAACCACTTTTCAACTAGATGGACATTAATTACACAACCGAGATGTGTATAAAATGTAAATATATAACGAAATATGCTTTATTTACATTATACGGAACATAGTTATATAGGTTTTAGGTTCGCGAAAGTCCTTTGTTCTAGTTAGGTAAGGTAAGGTGGAGAAA 162 10615437 0.917136905 31 147 1309 0.907103825 1.317018101 0.229508197 0.12962963 0.229508197 162 10 7 166 2R:10615251-10615469 6 psq FBtr0088275|FBtr0088280|FBtr0088277|FBtr0100607|FBtr0088276|FBtr0088279|FBtr0100606|FBtr0088281|FBtr0088278|FBtr0346958|FBtr0088282|FBtr0330607 10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10615080 10616248|10616248|10616248|10616248|10616248|10616248|10616248|10616248|10616248|10617280|10616248|10617280 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 10615409 10615464 3'utr psq FlyBase G11184.2 TATATAGGTTTTAGGTTCGCGAAAGTCCTTTGTTCTAGTTAGGTAAGGTAAGGTGG 45 10615437 0.73696563 8 40 353 0.859375 0.740362689 0.53125 0.333333333 0.53125 45 0 9 55 2R:10615409-10615464 6 22.5 1145 FBgn0263102 4429.833333 90.05333333 137.5466667 0.005079198 0.24985194 0.163580845 5 5 5 0.01 dme-miR-1006-3p 6mer2-7 GAATTT 2R 10615512 10615517 + 2R_10615512_10615517_+ 0.999960405 1 0.999980202 2.80E-05 psq FBtr0088278|FBtr0346958|FBtr0088282|FBtr0330607|FBtr0100606|FBtr0088281|FBtr0088277|FBtr0088276|FBtr0088275|FBtr0100607|FBtr0088280|FBtr0088279 10614840|10614840|10614840|10615080|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840 10616248|10617280|10616248|10617280|10616248|10616248|10616248|10616248|10616248|10616248|10616248|10616248 2R + 10615480 10615581 3'utr psq FlyBase G14695.1 AAGAAAACATACCTTGAACGTAAGAGAATGATGAATTTTAGATTTGCCTCTAGACTCGAAAGTTAATGGATTCGTTTTGGGCTCGCAGTTTTAAGAGCACTT 29 10615529 0.981655876 11 21 224 0.757575758 0.920818754 0.121212121 0.137931034 0.242424242 29 6 2 25 2R:10615480-10615581 6 psq FBtr0088275|FBtr0088280|FBtr0088277|FBtr0100607|FBtr0088276|FBtr0088279|FBtr0100606|FBtr0088281|FBtr0088278|FBtr0346958|FBtr0088282|FBtr0330607 10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10615080 10616248|10616248|10616248|10616248|10616248|10616248|10616248|10616248|10616248|10617280|10616248|10617280 GAATTT 6mer2-7 dme-miR-1006-3p 2R + 10615501 10615582 3'utr psq FlyBase G11185.1 AAGAGAATGATGAATTTTAGATTTGCCTCTAGACTCGAAAGTTAATGGATTCGTTTTGGGCTCGCAGTTTTAAGAGCACTTT 19 10615512 0.785790288 10 17 137 1 1.322219295 0.142857143 0.105263158 0.19047619 19 0 0 21 2R:10615501-10615582 6 8 1146 FBgn0263102 4429.833333 90.05333333 137.5466667 0.001805937 0.088836245 0.058162078 -17 0 -8.5 0.01 dme-miR-1003-3p 7mer-A1 TGTGAGA 2R 10615726 10615732 + 2R_10615726_10615732_+ 0.820123667 0.816940974 0.81853232 0.002250509 psq FBtr0088278|FBtr0346958|FBtr0088282|FBtr0330607|FBtr0100606|FBtr0088281|FBtr0088277|FBtr0088276|FBtr0088275|FBtr0100607|FBtr0088280|FBtr0088279 10614840|10614840|10614840|10615080|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840 10616248|10617280|10616248|10617280|10616248|10616248|10616248|10616248|10616248|10616248|10616248|10616248 2R + 10615703 10615790 3'utr psq FlyBase G14696.1 GCTTTGTTATAATTTTCGCTTAGTGTGAGACTGAAAGTGCGCCTAAAACTGTTGAAAAACCCCATGCCCAATATTATAGTGAAGACGC 377 10615728 0.968846894 15 358 2591 0.947867299 1.903089987 0.462085308 0.103448276 0.199052133 377 18 4 400 2R:10615703-10615790 7 psq FBtr0088275|FBtr0088280|FBtr0088277|FBtr0100607|FBtr0088276|FBtr0088279|FBtr0100606|FBtr0088281|FBtr0088278|FBtr0346958|FBtr0088282|FBtr0330607 10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10615080 10616248|10616248|10616248|10616248|10616248|10616248|10616248|10616248|10616248|10617280|10616248|10617280 TGTGAGA 7mer-A1 dme-miR-1003-3p 2R + 10615704 10615758 3'utr psq FlyBase G11187.1 CTTTGTTATAATTTTCGCTTAGTGTGAGACTGAAAGTGCGCCTAAAACTGTTGAA 196 10615728 0.846520173 10 175 1334 0.904761905 1.822821645 0.510204082 0.397959184 0.598639456 196 25 3 266 2R:10615704-10615758 7 267.5 1147 FBgn0263102 4429.833333 90.05333333 137.5466667 0.060386019 2.970461948 1.944794494 -2 -2 -2 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 10615884 10615889 + 2R_10615884_10615889_+ 1 1 1 0 psq FBtr0088278|FBtr0346958|FBtr0088282|FBtr0330607|FBtr0100606|FBtr0088281|FBtr0088277|FBtr0088276|FBtr0088275|FBtr0100607|FBtr0088280|FBtr0088279 10614840|10614840|10614840|10615080|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840 10616248|10617280|10616248|10617280|10616248|10616248|10616248|10616248|10616248|10616248|10616248|10616248 2R + 10615870 10615929 3'utr psq FlyBase G14697.2 TAACGTAGAATTAAACCAAATTATCAAGGTTCTAGAACTTAAATCATTAGCTTGTAACGA 56 10615893 0.718426822 9 53 407 0.951612903 1.469822016 0.129032258 0.107142857 0.193548387 56 2 1 59 2R:10615870-10615929 6 psq FBtr0088275|FBtr0088280|FBtr0088277|FBtr0100607|FBtr0088276|FBtr0088279|FBtr0100606|FBtr0088281|FBtr0088278|FBtr0346958|FBtr0088282|FBtr0330607 10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10615080 10616248|10616248|10616248|10616248|10616248|10616248|10616248|10616248|10616248|10617280|10616248|10617280 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 10615807 10615916 3'utr psq FlyBase G11188.1 ACATGAATCAAATGCTTTATAACCATATTGTTTGAACAGATAGAACGAAGTGGGAGAATACCTTAACGTAGAATTAAACCAAATTATCAAGGTTCTAGAACTTAAATCAT 44 10615892 0.982648134 11 41 306 0.968253968 1.785329835 0.206349206 0.295454545 0.507936508 44 2 0 61 2R:10615807-10615916 6 43 1148 FBgn0263102 4429.833333 90.05333333 137.5466667 0.009706911 0.477494818 0.312621171 -9 -8 -8.5 0.01 dme-miR-92b-3p 7mer-A1 TGCAATA 2R 10616734 10616740 + 2R_10616734_10616740_+ 0.778310225 0.782673926 0.780492076 0.003085602 psq FBtr0346958|FBtr0330607 10614840|10615080 10617280|10617280 2R + 10616615 10616759 3'utr psq FlyBase G14703.1 ATACATTTGAATAGATTTTTTTAGTTGTTAGCTGACCTAGGGGAACAGGTATCTGAATATTATAAAAATCAAATGTTGCAAATTAATTTATTTTAGCGTTATAGACCCGTAGAACTGAATGCAATATGCTTACCTTAAAACTCAA 73 10616731 0.802353941 22 71 417 0.988764045 1.944482672 0.123595506 0.205479452 0.348314607 73 1 0 88 2R:10616615-10616759 7 psq FBtr0346958|FBtr0330607 10614840|10615080 10617280|10617280 TGCAATA 7mer-A1 dme-miR-92b-3p 2R + 10616621 10616754 3'utr psq FlyBase G11192.1 TTGAATAGATTTTTTTAGTTGTTAGCTGACCTAGGGGAACAGGTATCTGAATATTATAAAAATCAAATGTTGCAAATTAATTTATTTTAGCGTTATAGACCCGTAGAACTGAATGCAATATGCTTACCTTAAAA 67 10616732 0.971410383 18 62 370 0.923913043 1.929418926 0.195652174 0.28358209 0.47826087 67 7 0 85 2R:10616621-10616754 7 50.5 1149 FBgn0263102 4429.833333 90.05333333 137.5466667 0.011399977 0.560778798 0.367148119 3 2 2.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2R 10640934 10640939 + 2R_10640934_10640939_+ 1 1 1 0 CG11883 FBtr0113063|FBtr0088284|FBtr0339461|FBtr0088283 10640587|10640725|10640587|10640587 10640990|10640990|10641807|10640990 2R + 10640818 10640957 3'utr CG11883 FlyBase G14708.1 GTTTATTGTTAATGCTCCACTGTTTTTTTCGGCTAAGTTTCGTTGTGAACGTTTGTAAGACTTCCCCAGAGATATTGATATTGATATTGTATATGATGCATGTGTAGTGAGTACGTGTACCTAAAGCTTACCGCTAGTTT 80 10640933 0.917121354 11 78 632 0.978021978 1.648360011 0.230769231 0.1125 0.21978022 80 1 1 89 2R:10640818-10640957 6 CG11883 FBtr0088283|FBtr0339461|FBtr0088284|FBtr0113063 10640587|10640587|10640725|10640587 10640990|10641807|10640990|10640990 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2R + 10640911 10640955 3'utr CG11883 FlyBase G11195.2 TGATGCATGTGTAGTGAGTACGTGTACCTAAAGCTTACCGCTAGT 25 10640933 0.807858948 4 24 144 0.970588235 1.51851394 0 0.32 0.5 25 1 0 33 2R:10640911-10640955 6 29 1150 FBgn0033538 276.0933333 9.15 14.24666667 0.105036944 3.169398907 2.035563875 1 1 1 0.01 dme-miR-1012-3p 7mer-A1 TGACTAA 2R 10641919 10641925 - 2R_10641919_10641925_- 0.823349562 0.823349562 0.823349562 0 Git FBtr0088258 10641816 10642010 2R - 10641889 10641968 3'utr Git FlyBase G21849.1 TCACTCTTTTTTGAAGTATTAACCGACCACTTTAGTGCCCTGCTGACTAACAAAAGTGCTTCCGCCAAATAATTTAAAGA 30 10641909 0.817330973 5 23 184 0.8 0.970036777 0.057142857 0.133333333 0.257142857 30 5 2 28 2R:10641889-10641968 7 Git FBtr0088258 10641816 10642010 TGACTAA 7mer-A1 dme-miR-1012-3p 2R - 10641869 10641945 3'utr Git FlyBase G16579.1 CGACCACTTTAGTGCCCTGCTGACTAACAAAAGTGCTTCCGCCAAATAATTTAAAGAATCCCCTTTACATATAGTTT 9 10641910 0.97042501 5 7 42 0.6 0.954242509 0 0.333333333 0.6 9 6 0 9 2R:10641869-10641945 7 9.5 1151 FBgn0033539 584.6766667 28.46666667 43.75333333 0.016248297 0.333723653 0.217126314 -16 -15 -15.5 0.01 dme-miR-34-5p 6mer2-7 ACTGCC 2R 10737392 10737397 + 2R_10737392_10737397_+ 0.999999986 0.999994776 0.999997381 3.68E-06 CG7220 FBtr0088216|FBtr0088217|FBtr0339465|FBtr0088219 10737369|10737369|10737369|10737369 10738370|10738370|10738370|10738370 2R + 10737378 10737432 5'utr-coding CG7220 FlyBase G14718.1 TGCCATTTACTAATACTGCCTGCTATTGTTTGCTTTGCGCATCCAACCAAAAAAA 15 10737391 0.988080887 6 14 139 0.863636364 0.67669361 0.045454545 0.2 0.454545455 15 0 3 19 2R:10737378-10737432 6 CG7220 FBtr0339465|FBtr0088219|FBtr0088216|FBtr0088217 10737369|10737369|10737369|10737369 10738370|10738370|10738370|10738370 ACTGCC 6mer2-7 dme-miR-34-5p 2R + 10737363 10737424 stop_codon CG7220 FlyBase G11200.1 CTGTTTAGTTAAAATTGCCATTTACTAATACTGCCTGCTATTGTTTGCTTTGCGCATCCAAC 10 10737390 0.986760763 7 10 90 1 1.176091259 0 0.3 0.533333333 10 0 0 15 2R:10737363-10737424 6 10 1152 FBgn0033544 368.3233333 29.77 45.41666667 0.027150058 0.335908633 0.220183486 1 2 1.5 0.01 dme-miR-980-5p 8mer-m1 GAAAAACT 2R 10737694 10737701 + 2R_10737694_10737701_+ 0.607906106 0.607906106 0.607906106 0 CG7220 FBtr0088216|FBtr0088217|FBtr0339465|FBtr0088219 10737369|10737369|10737369|10737369 10738370|10738370|10738370|10738370 2R + 10737639 10737701 3'utr CG7220 FlyBase G14720.1 GGCGCATGCAAACAATTCTAATTGTAGCTATGTGTAATCAACAAAAGGCGTGTGCGAAAAACT 17 10737676 0.938111976 5 15 63 0.9 1.255272505 0.05 0.117647059 0.25 17 2 0 18 2R:10737639-10737701 8 CG7220 FBtr0339465|FBtr0088219|FBtr0088216|FBtr0088217 10737369|10737369|10737369|10737369 10738370|10738370|10738370|10738370 GAAAAACT 8mer-m1 dme-miR-980-5p 2R + 10737670 10737697 3'utr CG7220 FlyBase G11201.1 GTGTAATCAACAAAAGGCGTGTGCGAAA 8 10737676 0.766415101 2 6 27 0.692307692 0.954242509 0 0.625 0.769230769 8 4 0 9 2R:10737670-10737697 4 12 1153 FBgn0033544 368.3233333 29.77 45.41666667 0.03258007 0.403090359 0.264220183 18 18 18 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 2R 10737984 10737989 + 2R_10737984_10737989_+ 1 1 1 0 CG7220 FBtr0088216|FBtr0088217|FBtr0339465|FBtr0088219 10737369|10737369|10737369|10737369 10738370|10738370|10738370|10738370 2R + 10737959 10737998 3'utr CG7220 FlyBase G14722.1 TGAGAAGCAAAACTCATGCGATCATAGTTAAGATTATGAC 8 10737975 0.953794436 2 8 43 1 1.041392685 0.272727273 0.25 0.454545455 8 0 0 11 2R:10737959-10737998 6 CG7220 FBtr0339465|FBtr0088219|FBtr0088216|FBtr0088217 10737369|10737369|10737369|10737369 10738370|10738370|10738370|10738370 AGTTAA 6mer3-8 dme-miR-999-3p 2R + 10737973 10738050 3'utr CG7220 FlyBase G11202.1 CATGCGATCATAGTTAAGATTATGACATTTTAAATGTATTAGCAGCCATATCCCCGATCGCTCTCATTGTCACCAGTC 12 10737986 0.979170694 9 10 75 0.882352941 1.176091259 0.411764706 0.333333333 0.529411765 12 2 0 15 2R:10737973-10738050 6 5.5 1154 FBgn0033544 368.3233333 29.77 45.41666667 0.014932532 0.184749748 0.121100917 9 -2 3.5 0.01 dme-miR-252-5p 6mer3-8 GTACTT 2R 10738110 10738115 + 2R_10738110_10738115_+ 1 1 1 0 CG7220 FBtr0088216|FBtr0088217|FBtr0339465|FBtr0088219 10737369|10737369|10737369|10737369 10738370|10738370|10738370|10738370 2R + 10738014 10738243 3'utr CG7220 FlyBase G14723.1 GCAGCCATATCCCCGATCGCTCTCATTGTCACCAGTCCTGCACTCTGTAATCTACCCACATTGCCCATGCATAGGTCGTTAAGTTAACCAGTTCATGTACTTGGCTAGGATAGTCCATCTGTGGCCAAAAATCTCGCAAGTGGCCCGATCGCAGAACACATTTACCTCTAACTGTGCAAGTAGATCTTAGGATGTGACGAGCTACTCGTCCGACTATCACACGATTTAAC 47 10738109 0.978623563 22 44 298 0.946428571 1.423245874 0.232142857 0.191489362 0.321428571 47 2 1 53 2R:10738014-10738243 6 CG7220 FBtr0339465|FBtr0088219|FBtr0088216|FBtr0088217 10737369|10737369|10737369|10737369 10738370|10738370|10738370|10738370 GTACTT 6mer3-8 dme-miR-252-5p 2R + 10738065 10738127 3'utr CG7220 FlyBase G11203.1 CTACCCACATTGCCCATGCATAGGTCGTTAAGTTAACCAGTTCATGTACTTGGCTAGGATAGT 9 10738109 0.829877623 2 7 67 0.928571429 1.113943352 0.071428571 0.333333333 0.571428571 9 1 0 13 2R:10738065-10738127 6 6.5 1155 FBgn0033544 368.3233333 29.77 45.41666667 0.017647538 0.218340611 0.143119266 1 1 1 0.01 dme-miR-965-3p 7mer-A1 ACGCTTA 2R 10738705 10738711 - 2R_10738705_10738711_- 0.823349562 0.823349562 0.823349562 0 Mat1 FBtr0088255 10738615 10738757 2R - 10738666 10738747 3'utr Mat1 FlyBase G21856.1 AAATATCCTTTAATGGTCGCACAACCAGAGCACTGAACGCTTAATTTTGTTGAACAAATGTGTCCTATACGAATCCATTCAG 53 10738703 0.967739616 10 51 303 0.95 1.755874856 0.116666667 0.113207547 0.216666667 53 3 0 57 2R:10738666-10738747 7 Mat1 FBtr0088255 10738615 10738757 ACGCTTA 7mer-A1 dme-miR-965-3p 2R - 10738625 10738736 3'utr Mat1 FlyBase G16585.1 AATGGTCGCACAACCAGAGCACTGAACGCTTAATTTTGTTGAACAAATGTGTCCTATACGAATCCATTCAGTTAACTCGTAACTTAATATATGTTAAATAAATAAATGCTAT 54 10738703 0.760862295 14 53 312 0.987951807 1.612783857 0.048192771 0.37037037 0.590361446 54 0 1 82 2R:10738625-10738736 7 43 1156 FBgn0024956 305.3266667 31.30333333 48.17 0.140832769 1.373655628 0.892671787 -8 -8 -8 0.01 dme-miR-7-5p 6mer2-7 TCTTCC 2R 10740586 10740591 - 2R_10740586_10740591_- 1 1 1 0 CG33144 FBtr0088254|FBtr0302517 10740394|10740052 10740928|10740928 2R - 10740532 10740612 3'utr CG33144 FlyBase G21863.1 CTGTATAAATCGAGTAGGTTCTCTTCCTAGCGCATAAGTTAGTCTAAATATATTAGGAGTACGCCTCGTATTGCAACAGTG 11 10740589 0.766086641 3 10 91 0.923076923 1.079181246 0.153846154 0.181818182 0.307692308 11 1 0 12 2R:10740532-10740612 6 CG33144 FBtr0302517|FBtr0088254 10740052|10740394 10740928|10740928 TCTTCC 6mer2-7 dme-miR-7-5p 2R - 10740578 10740608 3'utr CG33144 FlyBase G16589.1 ATAAATCGAGTAGGTTCTCTTCCTAGCGCAT 5 10740590 0.932209028 3 4 29 0.833333333 0.698970004 0.333333333 0.2 0.333333333 5 1 0 5 2R:10740578-10740608 6 6 1157 FBgn0053144 479.6233333 12.36 18.86333333 0.012509817 0.485436893 0.318077399 -2 -1 -1.5 0.01 dme-miR-283-5p 8mer-m1 TGATATTT 2R 10740761 10740768 - 2R_10740761_10740768_- 0.555308889 0.555579192 0.555444041 0.000191131 CG33144 FBtr0088254|FBtr0302517 10740394|10740052 10740928|10740928 2R - 10740705 10740808 3'utr CG33144 FlyBase G21864.1 AGTTATTACAATTATAATTGTATATGTGTTAACTAAATTGTGATATTTACAGTGATTCGATTTCTAATTGAATCGACAAATTTGTTGAGAACCTATACAAAGAC 118 10740771 0.99070226 17 110 1145 0.946666667 1.45331834 0.573333333 0.220338983 0.386666667 118 4 4 142 2R:10740705-10740808 8 CG33144 FBtr0302517|FBtr0088254 10740052|10740394 10740928|10740928 TGATATTT 8mer-m1 dme-miR-283-5p 2R - 10740732 10740882 3'utr CG33144 FlyBase G16590.1 AGCCTGTAAATGCAGCTGCTGTAATTACTGGTAGTTTCTATTGTTAATGACGACAGCTTACGTACATTTATTTTAGTTATTACAATTATAATTGTATATGTGTTAACTAAATTGTGATATTTACAGTGATTCGATTTCTAATTGAATCGAC 94 10740771 0.990140207 20 90 895 0.950704225 2.130333768 0.521126761 0.361702128 0.577464789 94 7 0 135 2R:10740732-10740882 8 95 1158 FBgn0053144 479.6233333 12.36 18.86333333 0.198072098 7.686084142 5.036225482 3 3 3 0.01 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 2R 10815116 10815122 + 2R_10815116_10815122_+ 0.823347062 0.823349562 0.823348312 1.77E-06 CG7222 FBtr0088223|FBtr0345945 10815109|10815109 10815781|10815781 2R + 10815062 10815161 stop_codon CG7222 FlyBase G14731.1 CATTACCACAATCCAAGAGCGCGAAGACTCCGACAACAGTCCCCTTTGAGACGTTACCTGACCGAAAATATGTCACTTGGCGACACACAAGCGATCATAG 24 10815107 0.96317925 9 20 106 0.827586207 1.079181246 0.24137931 0.125 0.275862069 24 4 1 24 2R:10815062-10815161 7 CG7222 FBtr0088223|FBtr0345945 10815109|10815109 10815781|10815781 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2R + 10815099 10815126 stop_codon CG7222 FlyBase G11213.1 AGTCCCCTTTGAGACGTTACCTGACCGA 6 10815107 0.731387243 4 6 28 1 1.041392685 0.272727273 0.666666667 0.818181818 6 0 0 11 2R:10815099-10815126 7 11.5 1159 FBgn0033551 801.0633333 64.22666667 98.17333333 0.014355919 0.179053353 0.117139753 9 9 9 0.01 dme-bantam-3p 6mer3-8 TGATCT 2R 10815752 10815757 + 2R_10815752_10815757_+ 1 1 1 0 CG7222 FBtr0088223|FBtr0345945 10815109|10815109 10815781|10815781 2R + 10815711 10815807 3'utr CG7222 FlyBase G14735.1 ATACAGAGTTCATAAGCCGCATGTCTATCAAAACACCAAAATGATCTGTTATCAATAAATATATGTACTTGACATTCTGATATTTACACATGCATAA 282 10815752 0.908737901 17 275 1699 0.973529412 2.042706739 0.017647059 0.187943262 0.326470588 282 7 2 331 2R:10815711-10815807 6 CG7222 FBtr0088223|FBtr0345945 10815109|10815109 10815781|10815781 TGATCT 6mer3-8 dme-bantam-3p 2R + 10815729 10815797 3'utr CG7222 FlyBase G11215.1 GCATGTCTATCAAAACACCAAAATGATCTGTTATCAATAAATATATGTACTTGACATTCTGATATTTAC 149 10815752 0.899534462 9 144 862 0.958333333 2.315970345 0.009259259 0.33557047 0.541666667 149 9 0 207 2R:10815729-10815797 6 199 1160 FBgn0033551 801.0633333 64.22666667 98.17333333 0.248419809 3.098401495 2.027027027 0 0 0 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 10839439 10839444 - 2R_10839439_10839444_- 0.755363009 0.755363009 0.755363009 0 CG30015 FBtr0113357|FBtr0113357|FBtr0113357|FBtr0306393|FBtr0306393|FBtr0306393|FBtr0331939|FBtr0331939|FBtr0331939|FBtr0088243|FBtr0088243|FBtr0088243|FBtr0113356|FBtr0113356|FBtr0113356|FBtr0331938|FBtr0331938|FBtr0331938|FBtr0088242|FBtr0088242|FBtr0088242 10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100 10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902 2R - 10839314 10839518 3'utr CG30015 FlyBase G21898.1 CTGTGCATGTCGAAAAATGTTTTGAAATAAACTAAATTACGTCTATTAATTGAGAGTCAAGAAAACTGTAAGGACTGTGAGTATAATTACGCGTAGCAAGGAGCCTGATATTCGAAACATTTGATTTACTTTAAGTTGATAATTTGCAAGCTTTTAATTGGTAGAAGAGATTGATTTTACTATTTAGACTAACTATTATTACTTA 61 10839451 0.980851047 19 54 398 0.918918919 1.531478917 0.202702703 0.163934426 0.310810811 61 5 1 68 2R:10839314-10839518 6 CG30015 FBtr0331939|FBtr0331939|FBtr0331939|FBtr0306393|FBtr0306393|FBtr0306393|FBtr0113357|FBtr0113357|FBtr0113357|FBtr0088242|FBtr0088242|FBtr0088242|FBtr0331938|FBtr0331938|FBtr0331938|FBtr0113356|FBtr0113356|FBtr0113356|FBtr0088243|FBtr0088243|FBtr0088243 10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100 10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 10839349 10839480 3'utr CG30015 FlyBase G16612.1 ACGTCTATTAATTGAGAGTCAAGAAAACTGTAAGGACTGTGAGTATAATTACGCGTAGCAAGGAGCCTGATATTCGAAACATTTGATTTACTTTAAGTTGATAATTTGCAAGCTTTTAATTGGTAGAAGAGA 45 10839441 0.971497802 14 38 236 0.884057971 1.484299839 0.202898551 0.422222222 0.623188406 45 7 1 61 2R:10839349-10839480 6 31.5 1161 FBgn0050015 810.93 16.1 24.71 0.03884429 1.956521739 1.274787535 7 -3 2 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2R 10839852 10839857 - 2R_10839852_10839857_- 1 1 1 0 CG30015 FBtr0113357|FBtr0306393|FBtr0331939|FBtr0088243|FBtr0113356|FBtr0331938|FBtr0088242 10839100|10839100|10839100|10839100|10839100|10839100|10839100 10839902|10839902|10839902|10839902|10839902|10839902|10839902 2R - 10839799 10839879 3'utr CG30015 FlyBase G21902.1 TAAATACTCCGCCGACCAGACTGTACCTAGCCTAGCTGCAATCCAAGTGCTTTTGTCTAGTGATGCGCTCTCCTTCAAGCA 27 10839858 0.917414661 8 25 135 0.933333333 1.146128036 0.1 0.111111111 0.2 27 1 1 28 2R:10839799-10839879 6 CG30015 FBtr0331939|FBtr0306393|FBtr0113357|FBtr0088242|FBtr0331938|FBtr0113356|FBtr0088243 10839100|10839100|10839100|10839100|10839100|10839100|10839100 10839902|10839902|10839902|10839902|10839902|10839902|10839902 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2R - 10839825 10839875 3'utr CG30015 FlyBase G16614.1 TACTCCGCCGACCAGACTGTACCTAGCCTAGCTGCAATCCAAGTGCTTTTG 18 10839858 0.887153548 6 14 76 0.964285714 1.431363764 0.214285714 0.388888889 0.607142857 18 1 0 27 2R:10839825-10839875 6 15 1162 FBgn0050015 810.93 16.1 24.71 0.018497281 0.931677019 0.607041684 1 1 1 0.01 dme-miR-307a-3p 7mer-A1 GTTGTGA 2R 10892582 10892588 + 2R_10892582_10892588_+ 0.823349562 0.822131586 0.822740574 0.000861256 CG30020 FBtr0088235|FBtr0339521 10892557|10892557 10893191|10892787 2R + 10892544 10892592 stop_codon CG30020 FlyBase G14783.1 AATGGGCAGCCCTAAGGAGCTGACGATAATTCCAAGTAGTTGTGAACTT 6 10892572 0.971432831 4 6 35 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2R:10892544-10892592 7 CG30020 FBtr0339521|FBtr0088235 10892557|10892557 10892787|10893191 GTTGTGA 7mer-A1 dme-miR-307a-3p 2R + 10892558 10892593 3'utr CG30020 FlyBase G11252.1 AGGAGCTGACGATAATTCCAAGTAGTTGTGAACTTA 7 10892573 0.984597105 4 5 44 0.705882353 0.602059991 0.117647059 1 1 7 3 2 12 2R:10892558-10892593 7 5.5 1163 FBgn0050020 876.3433333 22.63666667 34.61333333 0.006276079 0.242968635 0.158898305 10 9 9.5 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT 2R 10892656 10892661 + 2R_10892656_10892661_+ 1 1 1 0 CG30020 FBtr0088235|FBtr0339521 10892557|10892557 10893191|10892787 2R + 10892617 10892678 3'utr CG30020 FlyBase G14784.1 AATCGCACAATGTACAAAGTTTGATATAGTCTAAGTACTGTTCCTCTCCATCATTTTAGCAC 27 10892658 0.953747423 9 24 219 0.9 0.954242509 0.166666667 0.074074074 0.166666667 27 1 2 27 2R:10892617-10892678 6 CG30020 FBtr0339521|FBtr0088235 10892557|10892557 10892787|10893191 GTTCCT 6mer2-7 dme-miR-276a-3p 2R + 10892614 10892674 3'utr CG30020 FlyBase G11253.1 AGTAATCGCACAATGTACAAAGTTTGATATAGTCTAAGTACTGTTCCTCTCCATCATTTTA 21 10892658 0.987162652 9 19 163 0.942857143 1.51851394 0.028571429 0.476190476 0.685714286 21 2 0 33 2R:10892614-10892674 6 19 1164 FBgn0050020 876.3433333 22.63666667 34.61333333 0.021681 0.839346193 0.548921418 -2 -2 -2 0.01 dme-miR-970-3p 6mer3-8 TCTTAT 2R 10892735 10892740 + 2R_10892735_10892740_+ 1 1 1 0 CG30020 FBtr0088235|FBtr0339521 10892557|10892557 10893191|10892787 2R + 10892698 10892750 3'utr CG30020 FlyBase G14785.1 TCTTGTTAAGTTCTAGACTAGGACATTAAACACAATCTCTTATACAAAATTAG 23 10892737 0.970543825 3 22 155 0.9375 1 0.03125 0.217391304 0.4375 23 0 2 30 2R:10892698-10892750 6 CG30020 FBtr0339521|FBtr0088235 10892557|10892557 10892787|10893191 TCTTAT 6mer3-8 dme-miR-970-3p 2R + 10892706 10892754 3'utr CG30020 FlyBase G11254.1 AGTTCTAGACTAGGACATTAAACACAATCTCTTATACAAAATTAGTTGA 19 10892737 0.685025049 5 19 129 1 1.397940009 0.04 0.210526316 0.4 19 0 0 25 2R:10892706-10892754 6 20.5 1165 FBgn0050020 876.3433333 22.63666667 34.61333333 0.023392658 0.905610367 0.592257319 -2 -2 -2 0.01 dme-miR-34-5p 8mer-A1 CACTGCCA 2R 10982737 10982744 - 2R_10982737_10982744_- 0.678407974 0.678407974 0.678407974 0 luna FBtr0333066 10977954 10983297 2R - 10982717 10982767 3'utr luna FlyBase G21935.1 TTAATAATAATTTTGTTTTCATACACTGCCAAAATGAAAATGTAAAAAAAG 35 10982747 0.792800699 7 33 279 0.952380952 1.602059991 0.214285714 0.2 0.333333333 35 2 0 40 2R:10982717-10982767 8 luna FBtr0333066 10977954 10983297 CACTGCCA 8mer-A1 dme-miR-34-5p 2R - 10982726 10982762 3'utr luna FlyBase G16633.1 AATAATTTTGTTTTCATACACTGCCAAAATGAAAATG 24 10982747 0.750660855 7 24 161 1 1.505149978 0.5 0.291666667 0.46875 24 0 0 32 2R:10982726-10982762 8 29 1166 FBgn0040765 1623.386667 50.45666667 77.46666667 0.017863889 0.574750611 0.374354561 3 3 3 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2R 10982848 10982854 - 2R_10982848_10982854_- 0.671796082 0.671796082 0.671796082 0 luna FBtr0333066|FBtr0088210|FBtr0345675 10977954|10982792|10982792 10983297|10983297|10983297 2R - 10982829 10982879 3'utr luna FlyBase G21936.1 AAACAGCAAAAATTGTGTACAATTTACCAAAGCTAAGCTGATTTCTTTAAT 20 10982855 0.946450111 4 17 119 0.92 1.361727836 0.36 0.2 0.36 20 2 0 23 2R:10982829-10982879 7 luna FBtr0333066|FBtr0088210|FBtr0345675 10977954|10982792|10982792 10983297|10983297|10983297 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 10982834 10982868 3'utr luna FlyBase G16634.1 ATTGTGTACAATTTACCAAAGCTAAGCTGATTTCT 10 10982855 0.676690805 5 9 63 0.923076923 1.079181246 0.538461538 0.3 0.461538462 10 1 0 12 2R:10982834-10982868 7 14.5 1167 FBgn0040765 1623.386667 50.45666667 77.46666667 0.008931945 0.287375306 0.187177281 1 1 1 0.01 dme-miR-305-3p 7mer-A1 TGTGCCA 2R 10983211 10983217 - 2R_10983211_10983217_- 0.781699757 0.782843658 0.782271708 0.000808859 luna FBtr0333066|FBtr0088210|FBtr0345675 10977954|10982792|10982792 10983297|10983297|10983297 2R - 10983196 10983232 3'utr luna FlyBase G21937.1 ATCCAGCGGAAACTGTGTGCCATCAAGGAACGATGAA 12 10983217 0.912142406 2 11 37 0.916666667 1.041392685 0.166666667 0 0 12 1 0 11 2R:10983196-10983232 7 luna FBtr0333066|FBtr0088210|FBtr0345675 10977954|10982792|10982792 10983297|10983297|10983297 TGTGCCA 7mer-A1 dme-miR-305-3p 2R - 10983187 10983232 3'utr luna FlyBase G16636.1 ATCCAGCGGAAACTGTGTGCCATCAAGGAACGATGAAAAACTTGCG 8 10983217 0.882338161 4 7 19 0.9 0.954242509 0.5 0.125 0.3 8 1 0 9 2R:10983187-10983232 7 7.5 1168 FBgn0040765 1623.386667 50.45666667 77.46666667 0.004619971 0.148642399 0.096815835 0 0 0 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA 2R 11147832 11147837 - 2R_11147832_11147837_- 1 1 1 0 CG12391 FBtr0088205 11147600 11147924 2R - 11147816 11147867 5'utr CG12391 FlyBase G21940.1 TTAAGTTTCTCTAGCTGTAGGAAGAATTCAGTGCAAATAAATCACATTTGTA 81 11147840 0.822628134 5 80 498 0.988888889 1.949390007 0.144444444 0.098765432 0.188888889 81 1 0 89 2R:11147816-11147867 6 CG12391 FBtr0088205 11147600 11147924 GTGCAA 6mer3-8 dme-miR-92b-3p 2R - 11147808 11147864 5'utr CG12391 FlyBase G16638.1 AGTTTCTCTAGCTGTAGGAAGAATTCAGTGCAAATAAATCACATTTGTAATAAATAC 32 11147840 0.967108588 5 32 174 1 1.672097858 0.170212766 0.34375 0.553191489 32 0 0 47 2R:11147808-11147864 6 55 1169 FBgn0033581 833.3333333 42.62666667 65.30333333 0.066 1.29027213 0.84222347 3 3 3 0.01 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 1120763 1120769 + 2R_1120763_1120769_+ 0.823349562 0.823349562 0.823349562 0 rl FBtr0329920|FBtr0113700|FBtr0113702|FBtr0329919|FBtr0113703 1120749|1120749|1120749|1120749|1120749 1125927|1121107|1121107|1121771|1121107 2R + 1120739 1120786 stop_codon rl FlyBase G12499.1 AATGCGCCTTAAGAATGCGCTGTAAGCTTTAAGAATTTGAGTATATAG 13 1120761 0.984171241 3 10 85 0.888888889 1.204119983 0.222222222 0.230769231 0.444444444 13 2 0 16 2R:1120739-1120786 7 rl FBtr0113702|FBtr0329919|FBtr0329920|FBtr0113700|FBtr0113703 1120749|1120749|1120749|1120749|1120749 1121107|1121771|1125927|1121107|1121107 AGCTTTA 7mer-A1 dme-miR-79-3p 2R + 1120749 1120773 stop_codon rl FlyBase G9573.1 AAGAATGCGCTGTAAGCTTTAAGAA 6 1120761 0.714694217 2 6 30 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2R:1120749-1120773 7 9 1170 FBgn0003256 2023.603333 112.5466667 172.76 0.004447512 0.079966829 0.052095392 2 2 2 0.01 dme-miR-11-3p 7mer-m1 TGTGATG 2R 1120957 1120963 + 2R_1120957_1120963_+ 0.612071121 0.612071121 0.612071121 0 rl FBtr0329920|FBtr0113700|FBtr0113702|FBtr0329919|FBtr0113703 1120749|1120749|1120749|1120749|1120749 1125927|1121107|1121107|1121771|1121107 2R + 1120938 1120971 3'utr rl FlyBase G12500.1 GATAGGAACTTAAACTATGTGTGATGTTCGTAAA 8 1120955 0.741348628 2 7 67 0.888888889 0.903089987 0.111111111 0.125 0.222222222 8 1 0 8 2R:1120938-1120971 7 rl FBtr0113702|FBtr0329919|FBtr0329920|FBtr0113700|FBtr0113703 1120749|1120749|1120749|1120749|1120749 1121107|1121771|1125927|1121107|1121107 TGTGATG 7mer-m1 dme-miR-11-3p 2R + 1120936 1120968 3'utr rl FlyBase G9575.1 AAGATAGGAACTTAAACTATGTGTGATGTTCGT 6 1120955 0.936099245 2 6 48 1 1.041392685 0.363636364 0.5 0.727272727 6 0 0 11 2R:1120936-1120968 7 7 1171 FBgn0003256 2023.603333 112.5466667 172.76 0.003459176 0.062196422 0.040518639 2 2 2 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2R 1121374 1121379 + 2R_1121374_1121379_+ 1 1 1 0 rl FBtr0329920|FBtr0329919 1120749|1120749 1125927|1121771 2R + 1121353 1121403 3'utr rl FlyBase G12501.1 CATAATTTAATGTGATTTATCAAGACTAGCAGGGTAAACCTTCCTTGGATG 7 1121397 0.957320673 4 7 45 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 2R:1121353-1121403 6 rl FBtr0329919|FBtr0329920 1120749|1120749 1121771|1125927 AAGACT 6mer3-8 dme-miR-14-3p 2R + 1121345 1121405 3'utr rl FlyBase G9576.1 AGTTATATCATAATTTAATGTGATTTATCAAGACTAGCAGGGTAAACCTTCCTTGGATGTT 8 1121369 0.987375139 4 6 62 0.642857143 0.954242509 0.285714286 0.375 0.642857143 8 5 0 9 2R:1121345-1121405 6 3 1172 FBgn0003256 2023.603333 112.5466667 172.76 0.001482504 0.02665561 0.017365131 -23 5 -9 0.01 dme-miR-278-3p 6mer3-8 CCCACC 2R 11216414 11216419 + 2R_11216414_11216419_+ 1 1 1 0 shn FBtr0330620|FBtr0330619|FBtr0088100|FBtr0088099|FBtr0088098|FBtr0088101 11216243|11216213|11216213|11216213|11216213|11216213 11217394|11217394|11217394|11217394|11217394|11217394 2R + 11216383 11216439 3'utr shn FlyBase G14851.1 ACACAACTTACTCTAGAGCTAGCCTATAAGACCCACCTCTCTTCGATGATGGGCCCA 11 11216409 0.91327091 4 10 54 0.916666667 0.740362689 0.083333333 0.090909091 0.166666667 11 0 1 11 2R:11216383-11216439 6 shn FBtr0088098|FBtr0088101|FBtr0088100|FBtr0088099|FBtr0330620|FBtr0330619 11216213|11216213|11216213|11216213|11216243|11216213 11217394|11217394|11217394|11217394|11217394|11217394 CCCACC 6mer3-8 dme-miR-278-3p 2R + 11216379 11216441 3'utr shn FlyBase G11297.1 ACACACACAACTTACTCTAGAGCTAGCCTATAAGACCCACCTCTCTTCGATGATGGGCCCAAC 6 11216391 0.970735399 5 6 32 1 1.146128036 0 0.833333333 0.928571429 6 0 0 14 2R:11216379-11216441 6 5.5 1173 FBgn0003396 1305.2 16.31666667 25.01 0.004213914 0.337078652 0.219912035 5 23 14 0.01 dme-miR-1006-3p 6mer3-8 CGAATT 2R 11216526 11216531 + 2R_11216526_11216531_+ 0.507200502 0.507200502 0.507200502 0 shn FBtr0330620|FBtr0330619|FBtr0088100|FBtr0088099|FBtr0088098|FBtr0088101 11216243|11216213|11216213|11216213|11216213|11216213 11217394|11217394|11217394|11217394|11217394|11217394 2R + 11216508 11216561 3'utr shn FlyBase G14853.1 CAGTGTAAACACTCTAGGCGAATTGCGCTAAAATAATCATATACAAAGCCTTTT 6 11216531 0.963667363 4 6 31 1 0.77815125 0 0 0 6 0 0 6 2R:11216508-11216561 6 shn FBtr0088098|FBtr0088101|FBtr0088100|FBtr0088099|FBtr0330620|FBtr0330619 11216213|11216213|11216213|11216213|11216243|11216213 11217394|11217394|11217394|11217394|11217394|11217394 CGAATT 6mer3-8 dme-miR-1006-3p 2R + 11216499 11216541 3'utr shn FlyBase G11298.1 CAGCTATTCCAGTGTAAACACTCTAGGCGAATTGCGCTAAAAT 6 11216531 0.967870401 3 5 25 0.6 0.77815125 0 0.333333333 0.6 6 4 0 6 2R:11216499-11216541 6 4 1174 FBgn0003396 1305.2 16.31666667 25.01 0.003064664 0.24514811 0.159936026 -5 -5 -5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 11216752 11216757 + 2R_11216752_11216757_+ 0.740819701 0.40877587 0.574797786 0.234790423 shn FBtr0330620|FBtr0330620|FBtr0330620|FBtr0330619|FBtr0330619|FBtr0330619|FBtr0088100|FBtr0088100|FBtr0088100|FBtr0088099|FBtr0088099|FBtr0088099|FBtr0088098|FBtr0088098|FBtr0088098|FBtr0088101|FBtr0088101|FBtr0088101 11216243|11216243|11216243|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213 11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394 2R + 11216657 11216779 3'utr shn FlyBase G14854.2 GCCAACCAACGAGCACACTTATAAATCTATCTATATTGTATACACTTAACCATAATTTGTTTTCGAAATGCATAAATGCAAAAACTCCTGAAGTGCTGTGAGTCTATCTACAAATGTAAAGAT 118 11216750 0.783147818 17 101 729 0.874074074 1.469822016 0.125925926 0.13559322 0.244444444 118 14 3 118 2R:11216657-11216779 6 shn FBtr0088098|FBtr0088098|FBtr0088098|FBtr0088101|FBtr0088101|FBtr0088101|FBtr0088100|FBtr0088100|FBtr0088100|FBtr0088099|FBtr0088099|FBtr0088099|FBtr0330620|FBtr0330620|FBtr0330620|FBtr0330619|FBtr0330619|FBtr0330619 11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216243|11216243|11216243|11216213|11216213|11216213 11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 11216665 11216846 3'utr shn FlyBase G11299.2 ACGAGCACACTTATAAATCTATCTATATTGTATACACTTAACCATAATTTGTTTTCGAAATGCATAAATGCAAAAACTCCTGAAGTGCTGTGAGTCTATCTACAAATGTAAAGATCCGAGAGCGAGAGAAGTGTGTTATTTTTAAGGCCTAGCCCCGAAAATGAACCTCCAAACCGAACCAG 98 11216748 0.97152353 23 90 618 0.921052632 1.447158031 0.125 0.387755102 0.605263158 98 8 4 140 2R:11216665-11216846 6 72.5 1175 FBgn0003396 1305.2 16.31666667 25.01 0.055547043 4.443309499 2.898840464 2 4 3 0.01 dme-miR-7-5p 6mer2-7 TCTTCC 2R 11216920 11216925 + 2R_11216920_11216925_+ 1 1 1 0 shn FBtr0330620|FBtr0330619|FBtr0088100|FBtr0088099|FBtr0088098|FBtr0088101 11216243|11216213|11216213|11216213|11216213|11216213 11217394|11217394|11217394|11217394|11217394|11217394 2R + 11216867 11216948 3'utr shn FlyBase G14856.1 ATATTGGTTTTCTATGTCCAAATCCAAGTTTTGCCCTTTGAAAATCACGTAGTTCTTCCTTATTTCAAATTGTTATCACACC 33 11216926 0.989518234 9 29 297 0.918918919 1.531478917 0 0.090909091 0.189189189 33 3 0 34 2R:11216867-11216948 6 shn FBtr0088098|FBtr0088101|FBtr0088100|FBtr0088099|FBtr0330620|FBtr0330619 11216213|11216213|11216213|11216213|11216243|11216213 11217394|11217394|11217394|11217394|11217394|11217394 TCTTCC 6mer2-7 dme-miR-7-5p 2R + 11216881 11216935 3'utr shn FlyBase G11300.1 TGTCCAAATCCAAGTTTTGCCCTTTGAAAATCACGTAGTTCTTCCTTATTTCAAA 35 11216926 0.988919969 9 33 339 0.964912281 1.740362689 0.070175439 0.485714286 0.684210526 35 2 0 55 2R:11216881-11216935 6 28.5 1176 FBgn0003396 1305.2 16.31666667 25.01 0.021835734 1.746680286 1.139544182 -6 -6 -6 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 2R 11217197 11217203 + 2R_11217197_11217203_+ 0.782911824 0.782911824 0.782911824 0 shn FBtr0330620|FBtr0330619|FBtr0088100|FBtr0088099|FBtr0088098|FBtr0088101 11216243|11216213|11216213|11216213|11216213|11216213 11217394|11217394|11217394|11217394|11217394|11217394 2R + 11217054 11217259 3'utr shn FlyBase G14858.1 TTTTAATTTTGTATTTGACAGAAGAGAAACGAAATGATGAAAAAAAACGCTAACTGTAAATAATCAATATGTTGTCATATATGCATTAAGCGGTAGGTTAGATAAACAAACTACACAAAGTTGATAGATATAAATGAAATATTGTACAAACTGCTATGGCAAGCGCTGCAGCAAAATCTATATATACACATAGATATATATCTATA 581 11217195 0.993823186 28 548 3732 0.944211994 1.985490629 0.337517434 0.179001721 0.334728033 581 34 6 677 2R:11217054-11217259 7 shn FBtr0088098|FBtr0088101|FBtr0088100|FBtr0088099|FBtr0330620|FBtr0330619 11216213|11216213|11216213|11216213|11216243|11216213 11217394|11217394|11217394|11217394|11217394|11217394 GTACAAA 7mer-A1 dme-miR-305-5p 2R + 11217161 11217227 3'utr shn FlyBase G11304.2 AAACTACACAAAGTTGATAGATATAAATGAAATATTGTACAAACTGCTATGGCAAGCGCTGCAGCAA 353 11217195 0.714874836 12 345 2208 0.984703633 2.012837225 0.363288719 0.35694051 0.565965583 353 4 4 515 2R:11217161-11217227 7 432 1177 FBgn0003396 1305.2 16.31666667 25.01 0.330983757 26.47599591 17.27309076 2 2 2 0.01 dme-bantam-3p 6mer3-8 TGATCT 2R 11217302 11217307 + 2R_11217302_11217307_+ 1 1 1 0 shn FBtr0330620|FBtr0330619|FBtr0088100|FBtr0088099|FBtr0088098|FBtr0088101 11216243|11216213|11216213|11216213|11216213|11216213 11217394|11217394|11217394|11217394|11217394|11217394 2R + 11217279 11217329 3'utr shn FlyBase G14859.1 GGTTAAACAACAAGAAAATGAAGTGATCTATTACATTATTGTAAAATATAT 123 11217307 0.973741087 8 122 748 0.987096774 2.184691431 0.006451613 0.203252033 0.367741935 123 2 0 153 2R:11217279-11217329 6 shn FBtr0088098|FBtr0088101|FBtr0088100|FBtr0088099|FBtr0330620|FBtr0330619 11216213|11216213|11216213|11216213|11216243|11216213 11217394|11217394|11217394|11217394|11217394|11217394 TGATCT 6mer3-8 dme-bantam-3p 2R + 11217277 11217332 3'utr shn FlyBase G11305.1 GTGGTTAAACAACAAGAAAATGAAGTGATCTATTACATTATTGTAAAATATATCAA 99 11217297 0.978344205 10 94 629 0.96350365 1.643452676 0.04379562 0.313131313 0.503649635 99 3 2 132 2R:11217277-11217332 6 110.5 1178 FBgn0003396 1305.2 16.31666667 25.01 0.084661355 6.772216547 4.418232707 -5 5 0 0.01 dme-miR-305-5p 6mer3-8 AGTACA 2R 11226232 11226237 + 2R_11226232_11226237_+ 1 1 1 0 CG7737 FBtr0339479|FBtr0088105 11226115|11226115 11226746|11226746 2R + 11226225 11226270 3'utr CG7737 FlyBase G14868.1 ACTGATCAGTACATCCTGGATAGACTTCATATGCCTAAGCTAATAA 127 11226245 0.869160277 3 125 862 0.986486486 2.164352856 0.040540541 0.125984252 0.25 127 2 0 146 2R:11226225-11226270 6 CG7737 FBtr0339479|FBtr0088105 11226115|11226115 11226746|11226746 AGTACA 6mer3-8 dme-miR-305-5p 2R + 11226228 11226268 3'utr CG7737 FlyBase G11311.1 GATCAGTACATCCTGGATAGACTTCATATGCCTAAGCTAAT 56 11226245 0.864558044 4 56 368 1 1.949390007 0.04494382 0.375 0.606741573 56 0 0 89 2R:11226228-11226268 6 83.5 1179 FBgn0033584 242.6633333 12.57333333 19.08 0.344098133 6.641039236 4.376310273 -13 -13 -13 0.01 dme-miR-1008-3p 7mer-m8 AGCTGTG 2R 11226371 11226377 + 2R_11226371_11226377_+ 0.671795832 0.671795828 0.67179583 0 CG7737 FBtr0339479|FBtr0088105 11226115|11226115 11226746|11226746 2R + 11226344 11226392 3'utr CG7737 FlyBase G14869.1 TATGTCAACAAGTGCGCTGCCCAATAAAGCTGTGTTTAAGTCTTCTCTA 12 11226368 0.93717209 3 12 59 1 1.113943352 0.230769231 0.083333333 0.153846154 12 0 0 13 2R:11226344-11226392 7 CG7737 FBtr0339479|FBtr0088105 11226115|11226115 11226746|11226746 AGCTGTG 7mer-m8 dme-miR-1008-3p 2R + 11226338 11226390 3'utr CG7737 FlyBase G11312.1 TGTCAATATGTCAACAAGTGCGCTGCCCAATAAAGCTGTGTTTAAGTCTTCTC 13 11226368 0.779713142 5 11 63 0.954545455 1.322219295 0.227272727 0.538461538 0.727272727 13 1 0 21 2R:11226338-11226390 7 8 1180 FBgn0033584 242.6633333 12.57333333 19.08 0.032967486 0.636267232 0.419287212 3 3 3 0.01 dme-miR-965-3p 6mer2-7 ACGCTT 2R 11226442 11226447 + 2R_11226442_11226447_+ 1 1 1 0 CG7737 FBtr0339479|FBtr0088105 11226115|11226115 11226746|11226746 2R + 11226429 11226467 3'utr CG7737 FlyBase G14870.1 AAGCTAATGAAAAACGCTTCCCTCTCAATCGCATTTAAA 25 11226446 0.847368907 2 25 126 1 1.505149978 0.15625 0.2 0.375 25 0 0 32 2R:11226429-11226467 6 CG7737 FBtr0339479|FBtr0088105 11226115|11226115 11226746|11226746 ACGCTT 6mer2-7 dme-miR-965-3p 2R + 11226429 11226460 3'utr CG7737 FlyBase G11313.1 AAGCTAATGAAAAACGCTTCCCTCTCAATCGC 15 11226446 0.83524243 2 15 72 1 1.255272505 0.055555556 0.2 0.333333333 15 0 0 18 2R:11226429-11226460 6 20 1181 FBgn0033584 242.6633333 12.57333333 19.08 0.082418715 1.590668081 1.048218029 -4 -4 -4 0.01 dme-miR-252-5p 6mer3-8 GTACTT 2R 11226663 11226668 + 2R_11226663_11226668_+ 1 1 1 0 CG7737 FBtr0339479|FBtr0088105 11226115|11226115 11226746|11226746 2R + 11226601 11226690 3'utr CG7737 FlyBase G14871.1 GAGTGTATATACAACTGAGATACAATACGATTAGCTTTAGGTTTTACGGGGGGATTAACTCTGTACTTTGATTTCAACAACGTGTAATAC 24 11226668 0.984325135 6 24 191 1 1.477121255 0.066666667 0.25 0.4 24 0 0 30 2R:11226601-11226690 6 CG7737 FBtr0339479|FBtr0088105 11226115|11226115 11226746|11226746 GTACTT 6mer3-8 dme-miR-252-5p 2R + 11226655 11226684 3'utr CG7737 FlyBase G11315.1 TTAACTCTGTACTTTGATTTCAACAACGTG 14 11226668 0.688101187 3 14 113 1 1.204119983 0.125 0.142857143 0.25 14 0 0 16 2R:11226655-11226684 6 15 1182 FBgn0033584 242.6633333 12.57333333 19.08 0.061814036 1.19300106 0.786163522 -5 -5 -5 0.01 dme-miR-11-3p 7mer-m1 TGTGATG 2R 1125300 1125306 + 2R_1125300_1125306_+ 0.612071121 0.612071121 0.612071121 0 rl FBtr0329920|FBtr0345337 1120749|1125087 1125927|1125927 2R + 1125279 1125323 3'utr rl FlyBase G12503.1 AAGATAGGAACTTAAACTATGTGTGATGTTCGTAAAATGCAAAAC 12 1125298 0.689931011 3 12 94 1 1.146128036 0.357142857 0.166666667 0.285714286 12 0 0 14 2R:1125279-1125323 7 rl FBtr0329920|FBtr0345337 1120749|1125087 1125927|1125927 TGTGATG 7mer-m1 dme-miR-11-3p 2R + 1125279 1125322 3'utr rl FlyBase G9578.1 AAGATAGGAACTTAAACTATGTGTGATGTTCGTAAAATGCAAAA 9 1125298 0.90930168 4 9 78 1 1.146128036 0.357142857 0.444444444 0.642857143 9 0 0 14 2R:1125279-1125322 7 10.5 1183 FBgn0003256 2023.603333 112.5466667 172.76 0.005188764 0.093294633 0.060777958 2 2 2 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2R 1125714 1125719 + 2R_1125714_1125719_+ 1 1 1 0 rl FBtr0329920|FBtr0345337 1120749|1125087 1125927|1125927 2R + 1125689 1125743 3'utr rl FlyBase G12504.1 ATATCATAATTTAATGTGATTTATCAAGACTAGCAGGGTAAACCTTCCTTGGATG 19 1125709 0.754922276 7 17 146 0.9 1.255272505 0.4 0.052631579 0.1 19 2 0 18 2R:1125689-1125743 6 rl FBtr0329920|FBtr0345337 1120749|1125087 1125927|1125927 AAGACT 6mer3-8 dme-miR-14-3p 2R + 1125696 1125751 3'utr rl FlyBase G9579.1 AATTTAATGTGATTTATCAAGACTAGCAGGGTAAACCTTCCTTGGATGTTTAAGTG 8 1125737 0.765795464 5 7 56 0.933333333 1.146128036 0.4 0.5 0.733333333 8 1 0 14 2R:1125696-1125751 6 7.5 1184 FBgn0003256 2023.603333 112.5466667 172.76 0.00370626 0.066639024 0.043412827 5 -23 -9 0.01 dme-miR-252-5p 6mer3-8 GTACTT 2R 11280832 11280837 - 2R_11280832_11280837_- 1 1 1 0 CG9062 FBtr0088181|FBtr0332422 11280482|11280482 11281265|11281106 2R - 11280690 11280854 3'utr CG9062 FlyBase G21954.1 TCGTTAGGAATAAATATGTACTTCAGATTCAGACTTATAACAATTAGGCTTGCGACACACGTAGATAAGCATTGCAAAGGAGTAACTGCAGACATACCATTAAATCGTATTTGCATCTGAAGCAACTAGACCTAGAGTATTGCGCATATATGTATGTATGTAATA 26 11280838 0.976936123 13 24 165 0.96875 1.190331698 0.1875 0.153846154 0.3125 26 0 1 31 2R:11280690-11280854 6 CG9062 FBtr0088181|FBtr0332422 11280482|11280482 11281265|11281106 GTACTT 6mer3-8 dme-miR-252-5p 2R - 11280798 11280873 3'utr CG9062 FlyBase G16647.1 ACTTTTGTTTGTTCACTTCTCGTTAGGAATAAATATGTACTTCAGATTCAGACTTATAACAATTAGGCTTGCGACA 12 11280827 0.799257652 8 11 92 0.941176471 0.903089987 0.058823529 0.333333333 0.529411765 12 0 1 16 2R:11280798-11280873 6 8.5 1185 FBgn0033607 376.12 15.09333333 23.24 0.02259917 0.563162544 0.365748709 1 -10 -4.5 0.01 dme-miR-305-5p 6mer3-8 AGTACA 2R 11280833 11280838 + 2R_11280833_11280838_+ 0.999999998 1 0.999999999 0 Vhl FBtr0088115 11280413 11281033 2R + 11280793 11280854 3'utr Vhl FlyBase G14876.1 ACGTGTGTCGCAAGCCTAATTGTTATAAGTCTGAATCTGAAGTACATATTTATTCCTAACGA 21 11280818 0.731720005 7 19 181 0.923076923 1.380211242 0.153846154 0.238095238 0.384615385 21 2 0 24 2R:11280793-11280854 6 Vhl FBtr0088115 11280413 11281033 AGTACA 6mer3-8 dme-miR-305-5p 2R + 11280801 11280855 3'utr Vhl FlyBase G11318.1 CGCAAGCCTAATTGTTATAAGTCTGAATCTGAAGTACATATTTATTCCTAACGAG 14 11280818 0.990902955 7 10 107 0.789473684 0.698970004 0.473684211 0.214285714 0.421052632 14 2 2 15 2R:11280801-11280855 6 7.5 1186 FBgn0041174 57.31 6.31 9.536666667 0.130867213 1.18858954 0.786438308 15 15 15 0.01 dme-bantam-3p 7mer-m8 TGATCTC 2R 11281089 11281095 - 2R_11281089_11281095_- 0.661615243 0.661615243 0.661615243 0 CG9062 FBtr0088181|FBtr0332422 11280482|11280482 11281265|11281106 2R - 11281034 11281118 stop_codon CG9062 FlyBase G21955.1 CGCAAGTATTGAACGCTGGCAAGTGATCTCCCGCCTAACCGAAGCAGTACCGATGCATTATTGAATGAGAACGAGATTGAGCAGA 71 11281095 0.852989109 7 68 310 0.963414634 1.420505837 0.109756098 0.154929577 0.268292683 71 1 2 79 2R:11281034-11281118 7 CG9062 FBtr0088181|FBtr0332422 11280482|11280482 11281265|11281106 TGATCTC 7mer-m8 dme-bantam-3p 2R - 11281030 11281111 stop_codon CG9062 FlyBase G16648.1 ATTGAACGCTGGCAAGTGATCTCCCGCCTAACCGAAGCAGTACCGATGCATTATTGAATGAGAACGAGATTGAGCAGATCGA 27 11281095 0.793797336 7 27 107 1 1.602059991 0.125 0.407407407 0.6 27 0 0 40 2R:11281030-11281111 7 38.5 1187 FBgn0033607 376.12 15.09333333 23.24 0.102360949 2.550795053 1.656626506 0 0 0 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 11285664 11285669 - 2R_11285664_11285669_- 1 1 1 0 Fbl6 FBtr0088179|FBtr0088180|FBtr0088178 11285146|11285146|11285146 11285963|11285963|11285963 2R - 11285532 11285762 3'utr Fbl6 FlyBase G21963.2 AGGCCCTAGAGCGTAACTACTGTACTAGCATAGTATTCTCTGCACAGCGGCAGCAGCGAGTTCCTCCCTTTTCTGGAGGTGCCCGCATTAGATGCTGTGCGAATAAGCAACCTTTTGTAAATGCAATATGTATTCATAACTAAGTTGATTCGAATTTTTTGCAGCGCGAAAATCATTTCCTTTTGAAGACAACCGTTGCAACGATTTTCAATGATTTTTTTTAGTATATAT 505 11285670 0.948965696 30 500 3238 0.989726027 2.761927838 0.023972603 0.138613861 0.255136986 505 6 0 578 2R:11285532-11285762 6 Fbl6 FBtr0088179|FBtr0088180|FBtr0088178 11285146|11285146|11285146 11285963|11285963|11285963 GCTGTG 6mer2-7 dme-miR-1008-3p 2R - 11285632 11285803 3'utr Fbl6 FlyBase G16655.1 TGCAATCGCTTGCATCTTCCAATAATGCTTATTTTGTTTATAGGCCCTAGAGCGTAACTACTGTACTAGCATAGTATTCTCTGCACAGCGGCAGCAGCGAGTTCCTCCCTTTTCTGGAGGTGCCCGCATTAGATGCTGTGCGAATAAGCAACCTTTTGTAAATGCAATATGT 309 11285670 0.923095296 15 300 1997 0.979123173 2.194051588 0.022964509 0.414239482 0.622129436 309 8 2 469 2R:11285632-11285803 6 320.5 1188 FBgn0033609 266.6666667 9.223333333 14.21 1.201875 34.74882544 22.55453906 1 1 1 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 2R 11309685 11309690 + 2R_11309685_11309690_+ 0.999993911 0.999999972 0.999996941 4.31E-06 CG7745 FBtr0088119 11309524 11309829 2R + 11309671 11309717 3'utr CG7745 FlyBase G14891.1 CGAACACTTTTCAAATGTGCTAGTCAAGACCAGCAATTGGGATTCCA 18 11309687 0.971601645 3 18 108 1 1.322219295 0.238095238 0.166666667 0.285714286 18 0 0 21 2R:11309671-11309717 6 CG7745 FBtr0088119 11309524 11309829 ATGTGC 6mer3-8 dme-miR-305-3p 2R + 11309644 11309704 3'utr CG7745 FlyBase G11325.1 AGTCATTTGCAAAGCTCTACGTTCTACCGAACACTTTTCAAATGTGCTAGTCAAGACCAGC 10 11309687 0.9763679 4 10 66 1 1.146128036 0.214285714 0.3 0.5 10 0 0 14 2R:11309644-11309704 6 13.5 1189 FBgn0033616 171.0033333 10.95666667 16.76333333 0.07894583 1.232126559 0.805329091 -2 -2 -2 0.01 dme-bantam-3p 6mer3-8 TGATCT 2R 11462921 11462926 + 2R_11462921_11462926_+ 1 1 1 0 E(Pc) FBtr0330622|FBtr0330621|FBtr0088140|FBtr0088139|FBtr0330623 11461842|11461812|11461812|11461812|11461842 11464030|11465270|11464030|11464030|11465270 2R + 11462898 11462933 3'utr E(Pc) FlyBase G14939.1 AGGAATGGAACTTCAGAGGCAACTGATCTGAGAGAG 5 11462923 0.866889009 3 5 16 1 0.77815125 0.833333333 0.2 0.333333333 5 0 0 6 2R:11462898-11462933 6 E(Pc) FBtr0330623|FBtr0088139|FBtr0088140|FBtr0330621|FBtr0330622 11461842|11461812|11461812|11461812|11461842 11465270|11464030|11464030|11465270|11464030 TGATCT 6mer3-8 dme-bantam-3p 2R + 11462890 11462965 3'utr E(Pc) FlyBase G11353.1 TTTAACTAAGGAATGGAACTTCAGAGGCAACTGATCTGAGAGAGATGTAGGGAGTTGCAGAAGAAAACTACTATTG 15 11462924 0.973128488 7 10 64 0.833333333 1 0.291666667 0.466666667 0.666666667 15 3 1 20 2R:11462890-11462965 6 7.5 1190 FBgn0000581 1705.15 21.49666667 32.99 0.00439844 0.348891301 0.227341619 -2 -3 -2.5 0.01 dme-miR-12-5p 7mer-A1 ATACTCA 2R 11578959 11578965 - 2R_11578959_11578965_- 0.823349562 0.823349562 0.823349562 0 tou FBtr0333070|FBtr0113066|FBtr0088091|FBtr0333071 11577483|11578878|11578878|11578878 11579826|11579826|11579826|11579826 2R - 11578902 11578977 3'utr tou FlyBase G22042.1 ATGCGAACAATTATACTCAAAAAGGCGGTGCGAGGAGGACTTGTAAATGTAAATGAAAGCAAATTAAAATTAAATG 30 11578967 0.936521028 8 30 118 1 1.544068044 0.457142857 0.1 0.228571429 30 0 0 35 2R:11578902-11578977 7 tou FBtr0333071|FBtr0113066|FBtr0088091|FBtr0333070 11578878|11578878|11578878|11577483 11579826|11579826|11579826|11579826 ATACTCA 7mer-A1 dme-miR-12-5p 2R - 11578901 11579281 3'utr tou FlyBase G16721.1 AAGAAGCCATCTACAGTAGACGCCCGGACTGGATGAACGCTGACAAATGACAAATGAACACGTACAAAAACTGTCTACCAATTTCCGATCCGATCGATCGATCCATCGTTTGAACAGTATTTTGTGCACAAAGCCGCGTCGCTTTATTTTCTACACTTACAATTCGAACCCTAATTTTAACAACTATTTTTTAAGCACCAACGAAGCGCTCATTTAAGTTTTAAAGTGTATTTTGTACTTATAGCAACTCCGAAATCTGTATTTAAACGTATTATAACAAGTGCTAACAGTTGCCCAGGCAAAAATGCGAACAATTATACTCAAAAAGGCGGTGCGAGGAGGACTTGTAAATGTAAATGAAAGCAAATTAAAATTAAATGT 124 11578967 0.977775772 39 120 793 0.971590909 2.23299611 0.181818182 0.298387097 0.505681818 124 5 0 171 2R:11578901-11579281 7 17.5 1191 FBgn0033636 2664.063333 30.46 46.92333333 0.006568913 0.574523966 0.372948782 2 2 2 0.01 dme-miR-252-5p 7mer-m8 GTACTTA 2R 11579041 11579047 - 2R_11579041_11579047_- 0.588299917 0.588299917 0.588299917 0 tou FBtr0333070|FBtr0113066|FBtr0088091|FBtr0333071 11577483|11578878|11578878|11578878 11579826|11579826|11579826|11579826 2R - 11578989 11579093 3'utr tou FlyBase G22043.1 TTTTAAGCACCAACGAAGCGCTCATTTAAGTTTTAAAGTGTATTTTGTACTTATAGCAACTCCGAAATCTGTATTTAAACGTATTATAACAAGTGCTAACAGTTG 46 11579048 0.98838123 10 42 389 0.918032787 1.447158031 0.131147541 0.260869565 0.442622951 46 4 1 56 2R:11578989-11579093 7 tou FBtr0333071|FBtr0113066|FBtr0088091|FBtr0333070 11578878|11578878|11578878|11577483 11579826|11579826|11579826|11579826 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 11578901 11579281 3'utr tou FlyBase G16721.1 AAGAAGCCATCTACAGTAGACGCCCGGACTGGATGAACGCTGACAAATGACAAATGAACACGTACAAAAACTGTCTACCAATTTCCGATCCGATCGATCGATCCATCGTTTGAACAGTATTTTGTGCACAAAGCCGCGTCGCTTTATTTTCTACACTTACAATTCGAACCCTAATTTTAACAACTATTTTTTAAGCACCAACGAAGCGCTCATTTAAGTTTTAAAGTGTATTTTGTACTTATAGCAACTCCGAAATCTGTATTTAAACGTATTATAACAAGTGCTAACAGTTGCCCAGGCAAAAATGCGAACAATTATACTCAAAAAGGCGGTGCGAGGAGGACTTGTAAATGTAAATGAAAGCAAATTAAAATTAAATGT 124 11579048 0.977775772 39 120 793 0.971590909 2.23299611 0.181818182 0.298387097 0.505681818 124 5 0 171 2R:11578901-11579281 7 24 1192 FBgn0033636 2664.063333 30.46 46.92333333 0.009008795 0.787918582 0.511472615 1 1 1 0.01 dme-miR-8-3p 7mer-m8 CAGTATT 2R 11579161 11579167 - 2R_11579161_11579167_- 0.661615243 0.661615243 0.661615243 0 tou FBtr0333070|FBtr0113066|FBtr0088091|FBtr0333071 11577483|11578878|11578878|11578878 11579826|11579826|11579826|11579826 2R - 11579143 11579291 3'utr tou FlyBase G22044.2 CGTATCGCATAAGAAGCCATCTACAGTAGACGCCCGGACTGGATGAACGCTGACAAATGACAAATGAACACGTACAAAAACTGTCTACCAATTTCCGATCCGATCGATCGATCCATCGTTTGAACAGTATTTTGTGCACAAAGCCGCGT 70 11579160 0.981261947 13 65 463 0.963855422 1.903089987 0.072289157 0.142857143 0.277108434 70 3 0 80 2R:11579143-11579291 7 tou FBtr0333071|FBtr0113066|FBtr0088091|FBtr0333070 11578878|11578878|11578878|11577483 11579826|11579826|11579826|11579826 CAGTATT 7mer-m8 dme-miR-8-3p 2R - 11578901 11579281 3'utr tou FlyBase G16721.1 AAGAAGCCATCTACAGTAGACGCCCGGACTGGATGAACGCTGACAAATGACAAATGAACACGTACAAAAACTGTCTACCAATTTCCGATCCGATCGATCGATCCATCGTTTGAACAGTATTTTGTGCACAAAGCCGCGTCGCTTTATTTTCTACACTTACAATTCGAACCCTAATTTTAACAACTATTTTTTAAGCACCAACGAAGCGCTCATTTAAGTTTTAAAGTGTATTTTGTACTTATAGCAACTCCGAAATCTGTATTTAAACGTATTATAACAAGTGCTAACAGTTGCCCAGGCAAAAATGCGAACAATTATACTCAAAAAGGCGGTGCGAGGAGGACTTGTAAATGTAAATGAAAGCAAATTAAAATTAAATGT 124 11579159 0.977775772 39 120 793 0.971590909 2.23299611 0.181818182 0.298387097 0.505681818 124 5 0 171 2R:11578901-11579281 7 22.5 1193 FBgn0033636 2664.063333 30.46 46.92333333 0.008445745 0.73867367 0.479505576 -7 -8 -7.5 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 2R 11579383 11579388 - 2R_11579383_11579388_- 1 1 1 0 tou FBtr0333070|FBtr0113066|FBtr0088091|FBtr0333071 11577483|11578878|11578878|11578878 11579826|11579826|11579826|11579826 2R - 11579328 11579501 3'utr tou FlyBase G22045.1 AAACACACACGCGAGAGTATTCAACGTCCTACGTCGGTAAAGACCTTGGAAAGGGGTAGCTTTGATTAAATTAAATCACCAGCCAAGGCGAACAACAGCGCAAGTATGCAAGTGAAAAAGTGTATTCAGATTTTAAGTATCCAAGGCGGCAGCGGCAGCAGCAGTATATAAACA 35 11579395 0.965923153 14 31 165 0.863636364 0.977723605 0.272727273 0.228571429 0.386363636 35 3 3 38 2R:11579328-11579501 6 tou FBtr0333071|FBtr0113066|FBtr0088091|FBtr0333070 11578878|11578878|11578878|11577483 11579826|11579826|11579826|11579826 GAAAAA 6mer3-8 dme-miR-980-5p 2R - 11579368 11579408 3'utr tou FlyBase G16722.2 AACAGCGCAAGTATGCAAGTGAAAAAGTGTATTCAGATTTT 15 11579395 0.813738143 9 14 72 0.954545455 1.322219295 0.090909091 0.333333333 0.545454545 15 1 0 21 2R:11579368-11579408 6 13 1194 FBgn0033636 2664.063333 30.46 46.92333333 0.004879764 0.426789232 0.277047666 7 7 7 0.01 dme-miR-304-5p 7mer-A1 GAGATTA 2R 11579612 11579618 - 2R_11579612_11579618_- 0.823349562 0.823349562 0.823349562 0 tou FBtr0088094|FBtr0333070|FBtr0113066|FBtr0088091|FBtr0333071 11579515|11577483|11578878|11578878|11578878 11579826|11579826|11579826|11579826|11579826 2R - 11579533 11579655 5'utr tou FlyBase G22046.1 ACAACAGCATTAACTGAAGCAGCACAATTTTGGTCAAGAGATTAGTTTAGATTAAGCAGAGATTGTACATAAATGGGAGGAATGAGGAGAGGGTCGAGAAGCACAGCATACACATTAATATAT 52 11579627 0.810040972 16 47 333 0.90625 1.462397998 0.21875 0.173076923 0.328125 52 5 1 58 2R:11579533-11579655 7 tou FBtr0333071|FBtr0113066|FBtr0088091|FBtr0088094|FBtr0333070 11578878|11578878|11578878|11579515|11577483 11579826|11579826|11579826|11579826|11579826 GAGATTA 7mer-A1 dme-miR-304-5p 2R - 11579553 11579680 5'utr tou FlyBase G16724.1 GGATGAGGAGGCAGCCGTGGAGACGACAACAGCATTAACTGAAGCAGCACAATTTTGGTCAAGAGATTAGTTTAGATTAAGCAGAGATTGTACATAAATGGGAGGAATGAGGAGAGGGTCGAGAAGCA 35 11579627 0.967596227 11 33 175 0.962962963 1.414973348 0.148148148 0.4 0.611111111 35 1 1 52 2R:11579553-11579680 7 22.5 1195 FBgn0033636 2664.063333 30.46 46.92333333 0.008445745 0.73867367 0.479505576 9 9 9 0.01 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 2R 11619646 11619652 - 2R_11619646_11619652_- 0.82334956 0.82334956 0.82334956 0 CG9005 FBtr0300945 11619477 11620844 2R - 11619612 11619665 3'utr CG9005 FlyBase G22107.1 ATTTTCCAATTGATACCTGACTATAACTATTGTATAACAACGTACTACACAGCT 12 11619656 0.989233326 7 10 97 0.857142857 1.079181246 0.071428571 0.166666667 0.285714286 12 2 0 12 2R:11619612-11619665 7 CG9005 FBtr0300945 11619477 11620844 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2R - 11619614 11619665 3'utr CG9005 FlyBase G16756.1 ATTTTCCAATTGATACCTGACTATAACTATTGTATAACAACGTACTACACAG 7 11619655 0.99192614 5 5 46 0.714285714 0.698970004 0.142857143 0 0 7 2 0 5 2R:11619614-11619665 7 7.5 1196 FBgn0033638 313.34 6.546666667 10.11333333 0.023935661 1.145621181 0.741595254 4 3 3.5 0.01 dme-miR-190-5p 6mer2-7 CATATC 2R 11620076 11620081 - 2R_11620076_11620081_- 1 1 1 0 CG9005 FBtr0306029|FBtr0300945 11619848|11619477 11620844|11620844 2R - 11619985 11620117 3'utr CG9005 FlyBase G22109.1 GGGAATAGAATCGATCGATCAGTTGGTGTGCGCGCTCATATCGATCGTTGTTGTTAGTGTGTAGTGTGTTTTAACCACAGAAATTTAAGAATACCATCGATTTCGTTGAGTGCAAGTTTGAAATGAATTAACC 35 11620092 0.986690016 17 34 295 0.974358974 1.579783597 0.358974359 0.114285714 0.205128205 35 1 0 38 2R:11619985-11620117 6 CG9005 FBtr0300945|FBtr0306029 11619477|11619848 11620844|11620844 CATATC 6mer2-7 dme-miR-190-5p 2R - 11620036 11620107 3'utr CG9005 FlyBase G16758.1 TCGATCGATCAGTTGGTGTGCGCGCTCATATCGATCGTTGTTGTTAGTGTGTAGTGTGTTTTAACCACAGAA 22 11620091 0.985496953 6 21 179 0.888888889 1.505149978 0.416666667 0.318181818 0.583333333 22 4 0 32 2R:11620036-11620107 6 19 1197 FBgn0033638 313.34 6.546666667 10.11333333 0.060637008 2.902240326 1.878707976 11 10 10.5 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2R 11642877 11642883 - 2R_11642877_11642883_- 0.521223855 0.521223855 0.521223855 0 CG9003 FBtr0330632|FBtr0330634|FBtr0113069|FBtr0113068|FBtr0330633|FBtr0088088|FBtr0113067 11642266|11641475|11642266|11642266|11642266|11642266|11641475 11643134|11643188|11643188|11643188|11643134|11643188|11643188 2R - 11642747 11642910 3'utr CG9003 FlyBase G22136.1 AAAAACTCGCAGAAACCAGCATCAAATTGTGATTATTTTATTTACTATGCTACGTTATCTAGACCCTCACTTGTGTAAACTGTATTAGCGCCCACACTCTGTTTGTTATTAACTGCAGCCCGATGAATTGCTAGCTTATATAGATCTGTATATATACATATATG 302 11642884 0.862518302 25 293 2501 0.962962963 1.812913357 0.054320988 0.268211921 0.454320988 302 10 5 390 2R:11642747-11642910 7 CG9003 FBtr0088088|FBtr0113067|FBtr0113068|FBtr0330633|FBtr0113069|FBtr0330632|FBtr0330634 11642266|11641475|11642266|11642266|11642266|11642266|11641475 11643188|11643188|11643188|11643134|11643188|11643134|11643188 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 11642864 11642911 3'utr CG9003 FlyBase G16782.1 CAAAAACTCGCAGAAACCAGCATCAAATTGTGATTATTTTATTTACTA 173 11642884 0.987401994 10 162 1437 0.9437751 1.525969822 0.048192771 0.312138728 0.522088353 173 8 6 235 2R:11642864-11642911 7 220 1198 FBgn0033639 532.1833333 18.93 29.13 0.413391375 11.6217644 7.552351528 1 1 1 0.01 dme-bantam-3p 6mer3-8 TGATCT 2R 11643071 11643076 - 2R_11643071_11643076_- 1 1 1 0 CG9003 FBtr0330632|FBtr0330634|FBtr0113069|FBtr0113068|FBtr0330633|FBtr0088088|FBtr0113067 11642266|11641475|11642266|11642266|11642266|11642266|11641475 11643134|11643188|11643188|11643188|11643134|11643188|11643188 2R - 11643008 11643112 3'utr CG9003 FlyBase G22137.1 TGTTCGCCATGGTGTTCAGCCTGACCCTCGTCTCGATGATCTGCATGTACTTGCTGGGCCTGCTCGACGCGGCGATGACCACATGGCCACCAGATTCAAATTAAG 23 11643076 0.977523132 9 23 148 1 1.447158031 0.107142857 0.173913043 0.321428571 23 0 0 28 2R:11643008-11643112 6 CG9003 FBtr0088088|FBtr0113067|FBtr0113068|FBtr0330633|FBtr0113069|FBtr0330632|FBtr0330634 11642266|11641475|11642266|11642266|11642266|11642266|11641475 11643188|11643188|11643188|11643134|11643188|11643134|11643188 TGATCT 6mer3-8 dme-bantam-3p 2R - 11643048 11643111 3'utr CG9003 FlyBase G16783.1 GTTCGCCATGGTGTTCAGCCTGACCCTCGTCTCGATGATCTGCATGTACTTGCTGGGCCTGCTC 9 11643076 0.978087945 5 9 63 1 1.176091259 0.2 0.444444444 0.666666667 9 0 0 15 2R:11643048-11643111 6 6 1199 FBgn0033639 532.1833333 18.93 29.13 0.01127431 0.316957211 0.205973223 0 0 0 0.01 dme-miR-317-3p 7mer-A1 GTGTTCA 2R 11643095 11643101 - 2R_11643095_11643101_- 0.823349562 0.823349562 0.823349562 0 CG9003 FBtr0330632|FBtr0330634|FBtr0113069|FBtr0113068|FBtr0330633|FBtr0088088|FBtr0113067 11642266|11641475|11642266|11642266|11642266|11642266|11641475 11643134|11643188|11643188|11643188|11643134|11643188|11643188 2R - 11643008 11643112 3'utr CG9003 FlyBase G22137.1 TGTTCGCCATGGTGTTCAGCCTGACCCTCGTCTCGATGATCTGCATGTACTTGCTGGGCCTGCTCGACGCGGCGATGACCACATGGCCACCAGATTCAAATTAAG 23 11643076 0.977523132 9 23 148 1 1.447158031 0.107142857 0.173913043 0.321428571 23 0 0 28 2R:11643008-11643112 7 CG9003 FBtr0088088|FBtr0113067|FBtr0113068|FBtr0330633|FBtr0113069|FBtr0330632|FBtr0330634 11642266|11641475|11642266|11642266|11642266|11642266|11641475 11643188|11643188|11643188|11643134|11643188|11643134|11643188 GTGTTCA 7mer-A1 dme-miR-317-3p 2R - 11643048 11643111 3'utr CG9003 FlyBase G16783.1 GTTCGCCATGGTGTTCAGCCTGACCCTCGTCTCGATGATCTGCATGTACTTGCTGGGCCTGCTC 9 11643076 0.978087945 5 9 63 1 1.176091259 0.2 0.444444444 0.666666667 9 0 0 15 2R:11643048-11643111 7 6.5 1200 FBgn0033639 532.1833333 18.93 29.13 0.012213836 0.343370312 0.223137659 -25 -25 -25 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 2R 11688610 11688616 - 2R_11688610_11688616_- 0.782901415 0.782911824 0.782906619 7.35E-06 wal FBtr0088083 11688567 11689078 2R - 11688604 11688636 3'utr wal FlyBase G22155.1 TGTGAAAATGTGAAAACTGTGTACAAAAAAAGA 7 11688619 0.877184095 5 7 27 1 1 0.7 0.285714286 0.5 7 0 0 10 2R:11688604-11688636 7 wal FBtr0088083 11688567 11689078 GTACAAA 7mer-A1 dme-miR-305-5p 2R - 11688591 11688638 3'utr wal FlyBase G16798.1 AGTGTGAAAATGTGAAAACTGTGTACAAAAAAAGATTATAGATCAAAT 8 11688619 0.912093297 3 8 31 1 1.079181246 0.583333333 0.375 0.583333333 8 0 0 12 2R:11688591-11688638 7 6.5 1201 FBgn0010516 627.3333333 62.66 95.9 0.010361318 0.10373444 0.067778936 3 3 3 0.01 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 11689014 11689021 - 2R_11689014_11689021_- 0.625364269 0.625364269 0.625364269 0 wal FBtr0088083 11688567 11689078 2R - 11688990 11689087 stop_codon wal FlyBase G22158.1 AAGTTGTAAGGCGAGATTGTCACTTGCTGTAGTATAAAGATTGTGTACCGATGAATTGATAACTGTTGCATTTATTTGAATTTTGACATAAGTCCGTG 349 11689022 0.989842041 22 338 3491 0.966292135 1.934498451 0.359550562 0.212034384 0.382022472 349 11 4 430 2R:11688990-11689087 8 wal FBtr0088083|FBtr0088082 11688567|11688934 11689078|11689078 TGCATTTA 8mer-A1 dme-miR-277-3p 2R - 11688971 11689087 stop_codon wal FlyBase G16801.1 AAGTTGTAAGGCGAGATTGTCACTTGCTGTAGTATAAAGATTGTGTACCGATGAATTGATAACTGTTGCATTTATTTGAATTTTGACATAAGTCCGTGGAAGATTTTCCCTTAAATT 254 11689022 0.991362397 22 243 2604 0.960106383 1.858537198 0.29787234 0.374015748 0.57712766 254 11 4 361 2R:11688971-11689087 8 275 1202 FBgn0010516 627.3333333 62.66 95.9 0.438363443 4.388764762 2.867570386 1 1 1 0.01 dme-miR-980-3p 7mer-A1 GCAGCTA 2R 11826991 11826997 + 2R_11826991_11826997_+ 0.823349562 0.823349561 0.823349562 0 CG13192 FBtr0088031 11826796 11827097 2R + 11826972 11827037 3'utr CG13192 FlyBase G14964.1 AATTAAAGGGCTTGGCAATGCAGCTATTTGTTACTTAGATGAACTTTGACCACCCTTGAAAAAGAA 32 11826990 0.835183514 10 28 216 0.888888889 1.204119983 0.25 0.09375 0.194444444 32 3 1 32 2R:11826972-11827037 7 CG13192 FBtr0088031 11826796 11827097 GCAGCTA 7mer-A1 dme-miR-980-3p 2R + 11826976 11827029 3'utr CG13192 FlyBase G11369.1 AAAGGGCTTGGCAATGCAGCTATTTGTTACTTAGATGAACTTTGACCACCCTTG 16 11826990 0.835828957 7 15 104 0.884615385 0.759667845 0.461538462 0.5 0.692307692 16 0 3 23 2R:11826976-11827029 7 18 1203 FBgn0033653 156.6666667 14.10333333 21.37666667 0.114893617 1.27629402 0.842039607 1 1 1 0.01 dme-miR-1012-3p 6mer2-7 TGACTA 2R 11860647 11860652 + 2R_11860647_11860652_+ 1 1 1 0 Mtor FBtr0088033|FBtr0332464 11860601|11860601 11860853|11861202 2R + 11860624 11860731 3'utr Mtor FlyBase G14994.1 GCAGACGAAAGTCCGCTGTAGGCTGACTATAAAATCATTGCGTTTACTGGGCTAGAAATAAGTCTCCTCGCATTTAAAAGCGCTTAGGCTAGGATGAGCCACAAATAC 33 11860661 0.980180111 10 32 231 0.971428571 1.531478917 0.2 0.060606061 0.114285714 33 1 0 34 2R:11860624-11860731 6 Mtor FBtr0088033|FBtr0332464 11860601|11860601 11860853|11861202 TGACTA 6mer2-7 dme-miR-1012-3p 2R + 11860626 11860766 3'utr Mtor FlyBase G11387.1 AGACGAAAGTCCGCTGTAGGCTGACTATAAAATCATTGCGTTTACTGGGCTAGAAATAAGTCTCCTCGCATTTAAAAGCGCTTAGGCTAGGATGAGCCACAAATACATATTACTCTACATTCTCCAGCTTGCGAGTCCTGA 28 11860661 0.975769159 12 27 176 0.956521739 1.643452676 0.239130435 0.464285714 0.673913043 28 2 0 44 2R:11860626-11860766 6 8 1204 FBgn0013756 3678.656667 59.76 92.00666667 0.002174707 0.133868809 0.086950221 -14 -14 -14 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 11901057 11901064 + 2R_11901057_11901064_+ 0.500120318 0.500120318 0.500120318 0 Zip48C FBtr0088038 11900986 11901394 2R + 11901028 11901122 3'utr Zip48C FlyBase G15003.1 AATCTAGTGCTAAACTCAAAGATTCCACTGTACTTAACGCAAAACTCTGCTGTCTTGTAAATAGAAGCATGCTGTGTACAAATCTCAGAACCAGC 26 11901056 0.975057564 6 22 139 0.848484848 0.84509804 0.03030303 0.230769231 0.393939394 26 2 3 28 2R:11901028-11901122 8 Zip48C FBtr0088038 11900986 11901394 GTACTTAA 8mer-A1 dme-miR-252-5p 2R + 11901031 11901083 3'utr Zip48C FlyBase G11397.1 CTAGTGCTAAACTCAAAGATTCCACTGTACTTAACGCAAAACTCTGCTGTCTT 22 11901056 0.929426898 2 22 135 1 1.477121255 0.033333333 0.272727273 0.466666667 22 0 0 30 2R:11901031-11901083 8 21 1205 FBgn0033665 71.33333333 4.603333333 6.97 0.294392523 4.561911658 3.012912482 1 1 1 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 2R 11901300 11901305 + 2R_11901300_11901305_+ 1 1 1 0 Zip48C FBtr0088038 11900986 11901394 2R + 11901287 11901322 3'utr Zip48C FlyBase G15004.1 TAAACAAACGTGCATGTGAATTAGGTTTTAAGTTGT 28 11901307 0.800114717 4 26 232 0.942857143 1.51851394 0.314285714 0.214285714 0.371428571 28 2 0 33 2R:11901287-11901322 6 Zip48C FBtr0088038 11900986 11901394 ATGTGA 6mer3-8 dme-miR-1003-3p 2R + 11901284 11901321 3'utr Zip48C FlyBase G11399.1 TTGTAAACAAACGTGCATGTGAATTAGGTTTTAAGTTG 8 11901307 0.9728619 4 8 58 1 1.176091259 0.133333333 0.625 0.8 8 0 0 15 2R:11901284-11901321 6 17.5 1206 FBgn0033665 71.33333333 4.603333333 6.97 0.245327103 3.801593049 2.510760402 -7 -7 -7 0.01 dme-miR-1008-3p 7mer-m8 AGCTGTG 2R 11977117 11977123 + 2R_11977117_11977123_+ 0.671795832 0.671795832 0.671795832 0 ADD1 FBtr0088042 11977075 11977721 2R + 11977056 11977167 stop_codon ADD1 FlyBase G15023.1 ACGGCTGAGATTGTTGGCTAGTTTATGGTGATCATTTGAGGTCCCGCCGAAGAAGATTGGTAGCTGTGGCCCTCAAAACGTGCCATTTAGTATTTGTACTAGAATTTAAAAC 94 11977113 0.950595072 15 91 539 0.963636364 2.025305865 0.109090909 0.138297872 0.263636364 94 4 0 106 2R:11977056-11977167 7 ADD1 FBtr0088042 11977075 11977721 AGCTGTG 7mer-m8 dme-miR-1008-3p 2R + 11977032 11977167 stop_codon ADD1 FlyBase G11413.1 GACTCTGCGCCAGACGAGTTCGCCACGGCTGAGATTGTTGGCTAGTTTATGGTGATCATTTGAGGTCCCGCCGAAGAAGATTGGTAGCTGTGGCCCTCAAAACGTGCCATTTAGTATTTGTACTAGAATTTAAAAC 83 11977113 0.970090565 14 82 464 0.98245614 2.049218023 0.052631579 0.289156627 0.48245614 83 2 0 112 2R:11977032-11977167 7 72.5 1207 FBgn0026573 1224.666667 33.41666667 51.42333333 0.059199782 2.16957606 1.40986582 4 4 4 0.01 dme-bantam-3p 6mer3-8 TGATCT 2R 11977211 11977216 + 2R_11977211_11977216_+ 1 1 1 0 ADD1 FBtr0088042 11977075 11977721 2R + 11977191 11977234 3'utr ADD1 FlyBase G15024.1 AACATTTTATGTAAATACTTTGATCTGTTTATAGTTTAAACAAT 15 11977210 0.641064807 7 13 167 0.9375 1.176091259 0.0625 0.066666667 0.125 15 1 0 15 2R:11977191-11977234 6 ADD1 FBtr0088042 11977075 11977721 TGATCT 6mer3-8 dme-bantam-3p 2R + 11977199 11977234 3'utr ADD1 FlyBase G11414.1 ATGTAAATACTTTGATCTGTTTATAGTTTAAACAAT 17 11977210 0.712294705 6 16 184 0.931034483 1.431363764 0 0.529411765 0.724137931 17 2 0 27 2R:11977199-11977234 6 15 1208 FBgn0026573 1224.666667 33.41666667 51.42333333 0.012248231 0.448877805 0.291696376 1 1 1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 11977302 11977307 + 2R_11977302_11977307_+ 1 1 1 0 ADD1 FBtr0088042|FBtr0088042|FBtr0088042 11977075|11977075|11977075 11977721|11977721|11977721 2R + 11977265 11977324 3'utr ADD1 FlyBase G15025.1 GACATTAACACCATTATATTAACTGAATCGCGTATTCCTGTGAATATAAGTCGGGCACGT 28 11977299 0.983292618 9 27 202 0.941176471 1.505149978 0.088235294 0.178571429 0.323529412 28 2 0 32 2R:11977265-11977324 6 ADD1 FBtr0088042|FBtr0088042|FBtr0088042 11977075|11977075|11977075 11977721|11977721|11977721 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 11977284 11977323 3'utr ADD1 FlyBase G11415.1 TAACTGAATCGCGTATTCCTGTGAATATAAGTCGGGCACG 25 11977299 0.699335887 7 23 184 0.95 1.579783597 0.2 0.48 0.675 25 2 0 38 2R:11977284-11977323 6 26 1209 FBgn0026573 1224.666667 33.41666667 51.42333333 0.021230267 0.778054863 0.505607053 3 3 3 0.01 dme-miR-8-3p 6mer2-7 AGTATT 2R 11980847 11980852 - 2R_11980847_11980852_- 1 1 1 0 CG33145 FBtr0088048|FBtr0088047 11980575|11980575 11981259|11981729 2R - 11980810 11980864 3'utr CG33145 FlyBase G22245.1 AATAGAAGAGAAAGTATTTATTTTTGGACATGACTCGCCACATATATGTATCCTT 6 11980846 0.978703848 4 5 37 1 0.77815125 0 0 0 6 0 0 6 2R:11980810-11980864 6 CG33145 FBtr0088047|FBtr0088048 11980575|11980575 11981729|11981259 AGTATT 6mer2-7 dme-miR-8-3p 2R - 11980821 11980867 3'utr CG33145 FlyBase G16862.1 TATAATAGAAGAGAAAGTATTTATTTTTGGACATGACTCGCCACATA 6 11980841 0.972395318 4 6 38 1 1.079181246 0.25 0.5 0.75 6 0 0 12 2R:11980821-11980867 6 3.5 1210 FBgn0053145 299.43 15.87666667 24.38666667 0.011688876 0.220449297 0.14352105 -6 -11 -8.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2R 11991313 11991320 + 2R_11991313_11991320_+ 0.63113665 0.63113665 0.63113665 0 CG8298 FBtr0306003 11991281 11992350 2R + 11991105 11991372 stop_codon CG8298 FlyBase G15033.1 GAAATGCCTGCACTGGAACAACTACGAGACGTACGAGGCTGATATTGAGCTGTTTGCTCAGCGAGAACTTGATCCCAATTTACCTGTAAGGCGTTCCGTACCGGGCAGTATATTCCTGACCACTTCTTTTGCGATGATTATCCTGGCTAACTACTTAAAGTCCAATCCCCTGAAATAGTGGCTGATGTAGGGAAGAACGGCTGCTCTATCTAGTCAACCAAACACGTTCAAATGTGTGCATTAAAATTTATTGTTTAGTTTAGCATAT 178 11991312 0.976302187 34 169 1094 0.941176471 1.806179974 0.132352941 0.106741573 0.220588235 178 10 2 192 2R:11991105-11991372 8 CG8298 FBtr0306003 11991281 11992350 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R + 11991126 11991364 stop_codon CG8298 FlyBase G11420.1 CTACGAGACGTACGAGGCTGATATTGAGCTGTTTGCTCAGCGAGAACTTGATCCCAATTTACCTGTAAGGCGTTCCGTACCGGGCAGTATATTCCTGACCACTTCTTTTGCGATGATTATCCTGGCTAACTACTTAAAGTCCAATCCCCTGAAATAGTGGCTGATGTAGGGAAGAACGGCTGCTCTATCTAGTCAACCAAACACGTTCAAATGTGTGCATTAAAATTTATTGTTTAGTT 126 11991312 0.750569599 34 117 779 0.948598131 2.006466042 0.130841121 0.436507937 0.668224299 126 10 1 203 2R:11991126-11991364 8 48 1211 FBgn0033673 177.0033333 9.53 14.54 0.271181334 5.036726128 3.301237964 1 1 1 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 2R 12025664 12025669 - 2R_12025664_12025669_- 1 1 1 0 Mppe FBtr0088024|FBtr0339583|FBtr0088025|FBtr0339582 12025612|12025612|12025612|12025612 12025843|12025843|12025843|12025843 2R - 12025626 12025670 3'utr Mppe FlyBase G22268.1 TGAAAAAATGTAACCAATGTCCTCCATCCATATTCATTAAAAAAT 18 12025653 0.771348536 4 18 117 1 1.380211242 0.041666667 0.333333333 0.5 18 0 0 24 2R:12025626-12025670 6 Mppe FBtr0088024|FBtr0339583|FBtr0088025|FBtr0339582 12025612|12025612|12025612|12025612 12025843|12025843|12025843|12025843 GAAAAA 6mer3-8 dme-miR-980-5p 2R - 12025627 12025667 3'utr Mppe FlyBase G16884.1 AAAAATGTAACCAATGTCCTCCATCCATATTCATTAAAAAA 11 12025652 0.793792905 4 10 72 0.923076923 1.079181246 0.230769231 0.181818182 0.307692308 11 1 0 12 2R:12025627-12025667 4 4 1212 FBgn0259985 86.66666667 5.983333333 9.066666667 0.046153846 0.668523677 0.441176471 -16 -17 -16.5 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 2R 12033485 12033490 + 2R_12033485_12033490_+ 1 1 1 0 pds5 FBtr0087974|FBtr0306062 12032980|12032980 12033725|12033725 2R + 12033454 12033503 3'utr pds5 FlyBase G15067.1 AAGTAATTAAAATTAACTTTTCTATGATCGCAGTTAATTTTTAGTTAATG 81 12033478 0.828528072 5 78 941 0.976744186 1.924279286 0.011627907 0.061728395 0.11627907 81 2 0 84 2R:12033454-12033503 6 pds5 FBtr0087974|FBtr0306062 12032980|12032980 12033725|12033725 AGTTAA 6mer3-8 dme-miR-999-3p 2R + 12033455 12033507 3'utr pds5 FlyBase G11442.1 AGTAATTAAAATTAACTTTTCTATGATCGCAGTTAATTTTTAGTTAATGTAAC 51 12033478 0.814268939 6 50 574 0.985915493 1.84509804 0.042253521 0.333333333 0.521126761 51 1 0 70 2R:12033455-12033507 6 65 1213 FBgn0260012 1188.333333 30.65333333 47.06 0.054698457 2.120487168 1.38121547 7 7 7 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 2R 12049766 12049772 + 2R_12049766_12049772_+ 0.823349562 0.823349562 0.823349562 0 Drep-1 FBtr0330629|FBtr0087978 12049191|12049164 12050172|12050172 2R + 12049691 12049788 3'utr Drep-1 FlyBase G15086.1 GTAGAGTGGAAACGCACATCAAATATTGTTTTTAGACCAATGCCATTGTGAATGTCATTCGTTAAAGGCCAATTGAGACTGACTGAATTTATGTGTAA 137 12049764 0.942985892 7 134 550 0.965517241 2.225309282 0.373563218 0.233576642 0.396551724 137 6 0 168 2R:12049691-12049788 7 Drep-1 FBtr0330629|FBtr0087978 12049191|12049164 12050172|12050172 AGACTGA 7mer-A1 dme-miR-14-3p 2R + 12049743 12049790 3'utr Drep-1 FlyBase G11459.1 TGTCATTCGTTAAAGGCCAATTGAGACTGACTGAATTTATGTGTAATA 98 12049764 0.754699072 4 96 372 0.962264151 1.582631439 0.352201258 0.428571429 0.647798742 98 3 3 153 2R:12049743-12049790 7 116 1214 FBgn0024732 75.66666667 4.37 6.78 1.533039648 26.54462243 17.10914454 2 2 2 0.01 dme-miR-12-5p 6mer2-7 ATACTC 2R 12146152 12146157 - 2R_12146152_12146157_- 1 0.99999981 0.999999905 1.41E-07 CG8878 FBtr0088018|FBtr0088017 12146022|12146022 12146701|12146701 2R - 12146123 12146237 3'utr CG8878 FlyBase G22272.1 TAGTTTCGTTAGGCTATCAACAACCATATTATAGACCACATGTACGACTCGTTTCACCCACATTTCATGCAGCCAGGTACATACTCTCCTCAAAAAGTATTTAATATAACTAGAT 24 12146156 0.792361975 10 23 145 1 1.447158031 0.142857143 0.166666667 0.285714286 24 0 0 28 2R:12146123-12146237 6 CG8878 FBtr0088018|FBtr0088017 12146022|12146022 12146701|12146701 ATACTC 6mer2-7 dme-miR-12-5p 2R - 12146112 12146207 3'utr CG8878 FlyBase G16887.1 ATAGACCACATGTACGACTCGTTTCACCCACATTTCATGCAGCCAGGTACATACTCTCCTCAAAAAGTATTTAATATAACTAGATAATGGTTATTT 16 12146156 0.978456746 7 14 89 0.916666667 1.041392685 0.083333333 0.375 0.583333333 16 1 1 22 2R:12146112-12146207 6 9 1215 FBgn0027504 1146.95 34.64 53.11333333 0.007846898 0.259815242 0.169448977 -1 -1 -1 0.01 dme-miR-8-3p 6mer2-7 AGTATT 2R 12166876 12166881 - 2R_12166876_12166881_- 1 1 1 0 Oda FBtr0088015|FBtr0088013 12166293|12166574 12167397|12167397 2R - 12166790 12166906 3'utr Oda FlyBase G22343.1 ATTTTATGTTTAAGCTTATATATGAAGTATTGTAATCCCAATTTGTTCGCACTTAAAAATATTCAATATATTTTTATTCACTTTTTGTACGCCGAAAGCGACGAGAACGGCGAGGTA 13 12166884 0.989741016 8 12 119 0.933333333 1.146128036 0.066666667 0.153846154 0.266666667 13 1 0 14 2R:12166790-12166906 6 Oda FBtr0088015|FBtr0088013 12166293|12166574 12167397|12167397 AGTATT 6mer2-7 dme-miR-8-3p 2R - 12166829 12166894 3'utr Oda FlyBase G16950.1 AGCTTATATATGAAGTATTGTAATCCCAATTTGTTCGCACTTAAAAATATTCAATATATTTTTATT 6 12166876 0.993762778 4 6 62 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2R:12166829-12166894 6 5.5 1216 FBgn0014184 5981.923333 429.3966667 665.3566667 0.000919437 0.01280867 0.008266243 3 -5 -1 0.01 dme-miR-7-5p 6mer3-8 GTCTTC 2R 12167170 12167175 - 2R_12167170_12167175_- 1 1 1 0 Oda FBtr0088015|FBtr0088013|FBtr0088014 12166293|12166574|12167027 12167397|12167397|12167397 2R - 12167064 12167225 5'utr Oda FlyBase G22345.1 CTTTTTGAATCTTCGCGTTGTTTATGTAGTCGAAAATCGTTTTGAAAATTGTCTTCGGAGCGGCTTCATTTTTGGTAGACTTTCAATTATGGCCAGCCACGTTAAGAGCCTGATCGCAAATTACTATATTAAACTATATCCAACAACAACAAAAATCGAACG 37 12167176 0.979509746 17 37 271 1 1.643452676 0.045454545 0.189189189 0.318181818 37 0 0 44 2R:12167064-12167225 6 Oda FBtr0088014|FBtr0088015|FBtr0088013 12167027|12166293|12166574 12167397|12167397|12167397 GTCTTC 6mer3-8 dme-miR-7-5p 2R - 12167058 12167186 5'utr Oda FlyBase G16952.1 TTTTGAAAATTGTCTTCGGAGCGGCTTCATTTTTGGTAGACTTTCAATTATGGCCAGCCACGTTAAGAGCCTGATCGCAAATTACTATATTAAACTATATCCAACAACAACAAAAATCGAACGAAAACG 35 12167177 0.985440326 12 27 223 0.87037037 1.194976603 0.074074074 0.382352941 0.611111111 34 5 2 47 2R:12167058-12167186 6 14 1217 FBgn0014184 5981.923333 429.3966667 665.3566667 0.002340384 0.032603886 0.021041346 1 2 1.5 0.01 dme-miR-277-3p 6mer2-7 GCATTT 2R 12169881 12169886 + 2R_12169881_12169886_+ 1 1 1 0 SmD3 FBtr0087986 12169860 12170003 2R + 12169864 12169937 3'utr SmD3 FlyBase G15105.1 ACTGCCTACTGAACAACGCATTTCTATTCTCTAAGTTGCGGGCATCATATTATTAGCGGGCGGGTCGAACTTCT 13 12169888 0.983637194 8 13 102 1 1.255272505 0.166666667 0.384615385 0.555555556 13 0 0 18 2R:12169864-12169937 6 SmD3 FBtr0087986 12169860 12170003 GCATTT 6mer2-7 dme-miR-277-3p 2R + 12169866 12169910 3'utr SmD3 FlyBase G11472.1 TGCCTACTGAACAACGCATTTCTATTCTCTAAGTTGCGGGCATCA 11 12169888 0.646856793 3 11 87 1 1.146128036 0.071428571 0.272727273 0.428571429 11 0 0 14 2R:12169866-12169910 6 9.5 1218 FBgn0023167 214.3466667 36.93 56.45666667 0.044320727 0.257243434 0.16827065 -7 -7 -7 0.01 dme-miR-965-3p 6mer2-7 ACGCTT 2R 12177371 12177376 + 2R_12177371_12177376_+ 1 0.676976904 0.838488452 0.228411824 Cct5 FBtr0087988|FBtr0087987 12177315|12177315 12177516|12177516 2R + 12177317 12177440 3'utr Cct5 FlyBase G15117.1 CGACCGCCCAGCAGCAGCATCATACATCAGATCTAGTTTCAGATTCACATCCCCACGCTTCGCTATCTCTTCACGAACAACACCCGCGTCAAGCCTCATCTCTATGTACATCTGTATTAATTGT 34 12177386 0.97917329 11 32 221 0.948717949 1.267171728 0.128205128 0.147058824 0.256410256 34 1 1 37 2R:12177317-12177440 6 Cct5 FBtr0087988|FBtr0087987 12177315|12177315 12177516|12177516 ACGCTT 6mer2-7 dme-miR-965-3p 2R + 12177366 12177424 3'utr Cct5 FlyBase G11482.1 TCCCCACGCTTCGCTATCTCTTCACGAACAACACCCGCGTCAAGCCTCATCTCTATGTA 14 12177386 0.764651513 4 13 81 0.954545455 1.021189299 0.045454545 0.357142857 0.590909091 14 0 1 21 2R:12177366-12177424 6 12.5 1219 FBgn0010621 1543.283333 102.1633333 156.5533333 0.008099614 0.122353095 0.079844994 -15 -15 -15 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2R 12177463 12177469 - 2R_12177463_12177469_- 0.823349562 0.823349562 0.823349562 0 EndoG FBtr0088012 12177428 12177540 2R - 12177449 12177483 3'utr EndoG FlyBase G22363.1 AATTTTCTTCTTTTCCAAAGAACTTGTGGATTAAT 6 12177471 0.892011484 2 6 69 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2R:12177449-12177483 7 EndoG FBtr0088012 12177428 12177540 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 12177449 12177482 3'utr EndoG FlyBase G16968.1 ATTTTCTTCTTTTCCAAAGAACTTGTGGATTAAT 5 12177472 0.747228632 2 5 60 1 0.698970004 0 0 0 5 0 0 5 2R:12177449-12177482 7 5.5 1220 FBgn0033690 109.39 12.2 18.82333333 0.050278819 0.450819672 0.292190544 2 3 2.5 0.01 dme-miR-79-3p 8mer-A1 TAGCTTTA 2R 12182209 12182216 + 2R_12182209_12182216_+ 0.625364009 0.625364009 0.625364009 0 wash FBtr0339595|FBtr0087989 12182199|12182199 12182373|12182373 2R + 12182165 12182254 stop_codon wash FlyBase G15122.1 GAACACTCCGAGGACGACGAGGATGGGTGGAACTAGTGAATATTTAGCTTTAGTACCGGTTTAAGTGCCTTGGCTGGCTTAAAGCACTAG 24 12182208 0.974772391 7 23 141 1 1.531478917 0.147058824 0.333333333 0.529411765 24 0 0 34 2R:12182165-12182254 8 wash FBtr0339595|FBtr0087989 12182199|12182199 12182373|12182373 TAGCTTTA 8mer-A1 dme-miR-79-3p 2R + 12182164 12182268 stop_codon wash FlyBase G11488.1 CGAACACTCCGAGGACGACGAGGATGGGTGGAACTAGTGAATATTTAGCTTTAGTACCGGTTTAAGTGCCTTGGCTGGCTTAAAGCACTAGCAACCTAGGTTCTC 16 12182208 0.985694226 10 13 114 0.923076923 1.079181246 0.038461538 0.4375 0.653846154 16 1 1 24 2R:12182164-12182268 8 10 1221 FBgn0033692 122.6666667 8.66 13.35666667 0.081521739 1.154734411 0.748689793 1 1 1 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2R 12192420 12192426 - 2R_12192420_12192426_- 0.521223855 0.521223855 0.521223855 0 CG8858 FBtr0088008 12192372 12192572 2R - 12192373 12192439 3'utr CG8858 FlyBase G22374.1 GATAATTTTCTATTGTGATTCATTGATCCAGGAGTGTAAGGAAACCTTAAATATACTATCATAAATA 14 12192418 0.991198907 6 14 148 1 1.255272505 0.277777778 0.214285714 0.388888889 14 0 0 18 2R:12192373-12192439 7 CG8858 FBtr0088008 12192372 12192572 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 12192412 12192437 3'utr CG8858 FlyBase G16978.1 TAATTTTCTATTGTGATTCATTGATC 7 12192429 0.571277289 4 5 60 0.7 0.84509804 0.1 0.428571429 0.6 7 3 0 7 2R:12192412-12192437 7 9.5 1222 FBgn0033698 597.0133333 12.17333333 18.65666667 0.015912542 0.780394304 0.509201358 -8 3 -2.5 0.01 dme-miR-1008-3p 7mer-m8 AGCTGTG 2R 12273854 12273860 + 2R_12273854_12273860_+ 0.671795832 0.671795832 0.671795832 0 Cam FBtr0345018|FBtr0304963|FBtr0088001|FBtr0304964 12273793|12273793|12273793|12273793 12274625|12278809|12274625|12276621 2R + 12273819 12273921 3'utr Cam FlyBase G15131.1 CCTTTCTATTTTTTTAAGATGTTGACGAAGACTGTAGCTGTGCGCAATAACATCGCGCCACGCTGTTGCTATGGACCCCAGTAAAAGATCTTAAAAAAAAAAC 93 12273853 0.819222965 13 85 478 0.881889764 2.049218023 0.346456693 0.311827957 0.496062992 93 15 0 112 2R:12273819-12273921 7 Cam FBtr0088001|FBtr0304964|FBtr0345018|FBtr0304963 12273793|12273793|12273793|12273793 12274625|12276621|12274625|12278809 AGCTGTG 7mer-m8 dme-miR-1008-3p 2R + 12273825 12273916 3'utr Cam FlyBase G11494.1 TATTTTTTTAAGATGTTGACGAAGACTGTAGCTGTGCGCAATAACATCGCGCCACGCTGTTGCTATGGACCCCAGTAAAAGATCTTAAAAAA 63 12273853 0.900362024 12 61 328 0.958762887 1.491361694 0.237113402 0.380952381 0.597938144 63 2 2 93 2R:12273825-12273916 7 66 1223 FBgn0000253 25804.84 1958.443333 3036.34 0.00255766 0.033700235 0.021736696 1 1 1 0.01 dme-miR-8-3p 7mer-m8 CAGTATT 2R 12274393 12274399 + 2R_12274393_12274399_+ 0.661615243 0.661615243 0.661615243 0 Cam FBtr0345018|FBtr0304963|FBtr0088001|FBtr0304964 12273793|12273793|12273793|12273793 12274625|12278809|12274625|12276621 2R + 12274374 12274416 3'utr Cam FlyBase G15135.1 AAGCAGCAGCAGCATCCACCAGTATTGCCGAAAGATGGCGCCC 19 12274399 0.917330081 2 18 63 0.954545455 1.322219295 0.090909091 0.157894737 0.272727273 19 1 0 21 2R:12274374-12274416 7 Cam FBtr0088001|FBtr0304964|FBtr0345018|FBtr0304963 12273793|12273793|12273793|12273793 12274625|12276621|12274625|12278809 CAGTATT 7mer-m8 dme-miR-8-3p 2R + 12274365 12274415 3'utr Cam FlyBase G11495.2 AGAAGCAAGAAGCAGCAGCAGCATCCACCAGTATTGCCGAAAGATGGCGCC 12 12274399 0.872703081 3 10 33 0.80952381 1.230448921 0.095238095 0.666666667 0.80952381 12 4 0 17 2R:12274365-12274415 7 14.5 1224 FBgn0000253 25804.84 1958.443333 3036.34 0.00056191 0.007403839 0.004775486 -6 -6 -6 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 2R 12274548 12274553 + 2R_12274548_12274553_+ 1 1 1 0 Cam FBtr0345018|FBtr0304963|FBtr0088001|FBtr0304964 12273793|12273793|12273793|12273793 12274625|12278809|12274625|12276621 2R + 12274520 12274595 3'utr Cam FlyBase G15136.1 AAACCCCCCACTCTGTAAGCTAGCAAATTGTGTTTAAAGTATAATGAAAAAATTGTCGATTTCGTTGCGAGAAAGA 31 12274547 0.83175836 6 31 234 1 1.531478917 0.294117647 0.096774194 0.176470588 31 0 0 34 2R:12274520-12274595 6 Cam FBtr0088001|FBtr0304964|FBtr0345018|FBtr0304963 12273793|12273793|12273793|12273793 12274625|12276621|12274625|12278809 TGTGTT 6mer3-8 dme-miR-317-3p 2R + 12274505 12274586 3'utr Cam FlyBase G11497.1 AAAAGAAAATAATGAAAACCCCCCACTCTGTAAGCTAGCAAATTGTGTTTAAAGTATAATGAAAAAATTGTCGATTTCGTTG 21 12274547 0.984556926 4 18 139 0.9 1.130333768 0.3 0.333333333 0.533333333 21 2 1 27 2R:12274505-12274586 6 12.5 1225 FBgn0000253 25804.84 1958.443333 3036.34 0.000484405 0.00638262 0.004116799 1 1 1 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 2R 12274565 12274570 + 2R_12274565_12274570_+ 0.999999858 0.999999974 0.999999916 7.07E-08 Cam FBtr0345018|FBtr0304963|FBtr0088001|FBtr0304964 12273793|12273793|12273793|12273793 12274625|12278809|12274625|12276621 2R + 12274520 12274595 3'utr Cam FlyBase G15136.1 AAACCCCCCACTCTGTAAGCTAGCAAATTGTGTTTAAAGTATAATGAAAAAATTGTCGATTTCGTTGCGAGAAAGA 31 12274547 0.83175836 6 31 234 1 1.531478917 0.294117647 0.096774194 0.176470588 31 0 0 34 2R:12274520-12274595 6 Cam FBtr0088001|FBtr0304964|FBtr0345018|FBtr0304963 12273793|12273793|12273793|12273793 12274625|12276621|12274625|12278809 GAAAAA 6mer3-8 dme-miR-980-5p 2R + 12274505 12274586 3'utr Cam FlyBase G11497.1 AAAAGAAAATAATGAAAACCCCCCACTCTGTAAGCTAGCAAATTGTGTTTAAAGTATAATGAAAAAATTGTCGATTTCGTTG 21 12274547 0.984556926 4 18 139 0.9 1.130333768 0.3 0.333333333 0.533333333 21 2 1 27 2R:12274505-12274586 6 9.5 1226 FBgn0000253 25804.84 1958.443333 3036.34 0.000368148 0.004850791 0.003128767 18 18 18 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 12275344 12275351 + 2R_12275344_12275351_+ 0.500120318 0.500120318 0.500120318 0 Cam FBtr0304963|FBtr0304964 12273793|12273793 12278809|12276621 2R + 12275325 12275363 3'utr Cam FlyBase G15139.1 ATACATATAAATACCTAATGTACTTAATGCAACAGGAAA 34 12275343 0.741351897 4 34 205 1 1.681241237 0.041666667 0.235294118 0.458333333 34 0 0 48 2R:12275325-12275363 8 Cam FBtr0304964|FBtr0304963 12273793|12273793 12276621|12278809 GTACTTAA 8mer-A1 dme-miR-252-5p 2R + 12275305 12275366 3'utr Cam FlyBase G11498.1 AACTCTATACATATATATATATACATATAAATACCTAATGTACTTAATGCAACAGGAAAACC 23 12275343 0.975109623 2 23 145 1 1.51851394 0.121212121 0.391304348 0.575757576 23 0 0 33 2R:12275305-12275366 8 28 1227 FBgn0000253 25804.84 1958.443333 3036.34 0.001085068 0.014297069 0.009221629 1 1 1 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT 2R 12322944 12322949 - 2R_12322944_12322949_- 0.844445595 0.999882753 0.922164174 0.109910698 CG8841 FBtr0087966|FBtr0087964|FBtr0087965 12322505|12322505|12322505 12323316|12323316|12323316 2R - 12322929 12322974 3'utr CG8841 FlyBase G22409.1 GTTTTTGTAATCTGTGACAGAAAATGTTCCTTGTGCCGTATATTTT 30 12322949 0.727617264 4 30 214 1 1.579783597 0.605263158 0.2 0.368421053 30 0 0 38 2R:12322929-12322974 6 CG8841 FBtr0087965|FBtr0087966|FBtr0087964 12322505|12322505|12322505 12323316|12323316|12323316 GTTCCT 6mer2-7 dme-miR-276a-3p 2R - 12322919 12322963 3'utr CG8841 FlyBase G17000.1 CTGTGACAGAAAATGTTCCTTGTGCCGTATATTTTATTGCATGGT 27 12322950 0.976292033 3 27 185 1 1.602059991 0.65 0.37037037 0.575 27 0 0 40 2R:12322919-12322963 6 27.5 1228 FBgn0033713 204.63 7.073333333 10.83333333 0.134388897 3.887841659 2.538461538 0 1 0.5 0.01 dme-miR-282-5p 6mer2-7 GAGGCT 2R 12323140 12323145 - 2R_12323140_12323145_- 1 1 1 0 CG8841 FBtr0087966|FBtr0087964|FBtr0087965 12322505|12322505|12322505 12323316|12323316|12323316 2R - 12323123 12323171 3'utr CG8841 FlyBase G22410.1 TTTTGCTTATTGGCAACAAAAAAAATGAGGCTTATCAGTTACGATGTGG 104 12323146 0.963285008 5 104 426 1 2.075546961 0.201680672 0.125 0.235294118 104 0 0 119 2R:12323123-12323171 6 CG8841 FBtr0087965|FBtr0087966|FBtr0087964 12322505|12322505|12322505 12323316|12323316|12323316 GAGGCT 6mer2-7 dme-miR-282-5p 2R - 12323126 12323168 3'utr CG8841 FlyBase G17001.1 TGCTTATTGGCAACAAAAAAAATGAGGCTTATCAGTTACGATG 69 12323146 0.985004196 3 66 265 1 1.977723605 0.115789474 0.308823529 0.505263158 68 0 0 95 2R:12323126-12323168 6 83.5 1229 FBgn0033713 204.63 7.073333333 10.83333333 0.40805356 11.80490104 7.707692308 1 1 1 0.01 dme-miR-277-3p 7mer-A1 GCATTTA 2R 12323254 12323260 - 2R_12323254_12323260_- 0.823349562 0.823349562 0.823349562 0 CG8841 FBtr0087966|FBtr0087964|FBtr0087965 12322505|12322505|12322505 12323316|12323316|12323316 2R - 12323234 12323382 stop_codon CG8841 FlyBase G22411.1 CGCAACGTGGAGCCTGCCATCTGGTACGATACGGAGGTCAAGCTCTTCGAGATTCAGCGCGTCTAGGTCAGTAAGTGGACTCCCAGCTACACCAGCAGCGCAATCGTAGCTTACACGCTTTGGCATTTACTGTAGTTAATTTATTTAGT 43 12323262 0.980589189 10 41 292 0.980392157 1.397940009 0.117647059 0.162790698 0.294117647 43 0 1 50 2R:12323234-12323382 7 CG8841 FBtr0087965|FBtr0087966|FBtr0087964 12322505|12322505|12322505 12323316|12323316|12323316 GCATTTA 7mer-A1 dme-miR-277-3p 2R - 12323240 12323283 3'utr CG8841 FlyBase G17002.1 GCAATCGTAGCTTACACGCTTTGGCATTTACTGTAGTTAATTTA 18 12323262 0.714205808 4 15 135 0.84 0.84509804 0.12 0.277777778 0.48 18 2 2 21 2R:12323240-12323283 7 25 1230 FBgn0033713 204.63 7.073333333 10.83333333 0.122171725 3.534401508 2.307692308 2 2 2 0.01 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 12333706 12333712 + 2R_12333706_12333712_+ 0.823349562 0.823349562 0.823349562 0 garz FBtr0087897 12333495 12333860 2R + 12333648 12333746 3'utr garz FlyBase G15178.1 AGCTATCCAGAAAAACAAACCTAAATCACAGATGCGAAGTTCGGCTGAACCCCCTATAAGCTTTAGTAATGCAAATAGTTTAATTAATATTAATTAAAT 287 12333704 0.977839565 10 283 1868 0.984520124 2.201397124 0.018575851 0.111498258 0.210526316 287 4 1 318 2R:12333648-12333746 7 garz FBtr0087897 12333495 12333860 AGCTTTA 7mer-A1 dme-miR-79-3p 2R + 12333681 12333732 3'utr garz FlyBase G11521.1 GCGAAGTTCGGCTGAACCCCCTATAAGCTTTAGTAATGCAAATAGTTTAATT 188 12333704 0.827074714 6 185 1164 0.988679245 2.418301291 0.018867925 0.308510638 0.509433962 188 3 0 262 2R:12333681-12333732 7 226 1231 FBgn0264560 903.09 16.44 25.09666667 0.250251913 13.74695864 9.005179971 2 2 2 0.01 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 12339635 12339642 - 2R_12339635_12339642_- 0.625364269 0.625364269 0.625364269 0 CG8839 FBtr0087957|FBtr0087959|FBtr0087958|FBtr0087960 12339608|12339608|12339608|12339608 12339892|12339892|12339892|12339892 2R - 12339620 12339719 3'utr CG8839 FlyBase G22424.1 TCGATGTGGATTTATCTATTTTGTATGTGTTTTTAAATGTAATCTAATCATAGATCCGCGCGGATCCGTTCCCGTTTTGCATTTATAATAAATAATTGCA 26 12339643 0.991061188 8 24 260 0.933333333 1.146128036 0.166666667 0.153846154 0.266666667 26 1 1 28 2R:12339620-12339719 8 CG8839 FBtr0087958|FBtr0087960|FBtr0087957|FBtr0087959 12339608|12339608|12339608|12339608 12339892|12339892|12339892|12339892 TGCATTTA 8mer-A1 dme-miR-277-3p 2R - 12339626 12339704 3'utr CG8839 FlyBase G17018.1 CTATTTTGTATGTGTTTTTAAATGTAATCTAATCATAGATCCGCGCGGATCCGTTCCCGTTTTGCATTTATAATAAATA 20 12339643 0.748667447 7 17 180 0.911764706 1.014240439 0.176470588 0.5 0.705882353 20 1 2 31 2R:12339626-12339704 8 13.5 1232 FBgn0033717 1014.353333 58.28666667 87.84 0.013308972 0.231613863 0.153688525 1 1 1 0.01 dme-miR-999-3p 6mer2-7 GTTAAC 2R 12339829 12339834 - 2R_12339829_12339834_- 1 1 1 0 CG8839 FBtr0087957|FBtr0087959|FBtr0087958|FBtr0087960 12339608|12339608|12339608|12339608 12339892|12339892|12339892|12339892 2R - 12339725 12339984 stop_codon CG8839 FlyBase G22425.1 CCAACTTCAATCAGGATCGACTTTGTTTGGCCGTTGCCGAGGAATTGGAGCGAGCCTTTGGCGGTTGGGCCAAGCCCGAAGTTCGGCTCTAGGAGCAGTCTCAAACGTGCAAGTATGCAGCTTAGCTAGCTTTTAGATAGTAGTGGTCAGGTTAACGTCCTGGTCTCCCCCCACCCATTACTAACTACCCCTACCCACCCGAGCATTCGCCTGGCGATGAAAGGTATTCCTTGTGTACTCCAGTGCCTCATTGTAATATC 87 12339824 0.978622762 29 83 564 0.962616822 1.53571597 0.261682243 0.16091954 0.317757009 87 2 2 103 2R:12339725-12339984 6 CG8839 FBtr0087958|FBtr0087960|FBtr0087957|FBtr0087959 12339608|12339608|12339608|12339608 12339892|12339892|12339892|12339892 GTTAAC 6mer2-7 dme-miR-999-3p 2R - 12339720 12339900 stop_codon CG8839 FlyBase G17019.1 GGCTCTAGGAGCAGTCTCAAACGTGCAAGTATGCAGCTTAGCTAGCTTTTAGATAGTAGTGGTCAGGTTAACGTCCTGGTCTCCCCCCACCCATTACTAACTACCCCTACCCACCCGAGCATTCGCCTGGCGATGAAAGGTATTCCTTGTGTACTCCAGTGCCTCATTGTAATATCAATTT 50 12339824 0.861418317 23 47 316 0.934210526 1.851258349 0.25 0.44 0.631578947 50 5 0 71 2R:12339720-12339900 6 18.5 1233 FBgn0033717 1014.353333 58.28666667 87.84 0.018238221 0.317396775 0.2106102 -10 -10 -10 0.01 dme-miR-980-3p 6mer2-7 GCAGCT 2R 12339863 12339868 - 2R_12339863_12339868_- 0.759497043 0.999375349 0.879436196 0.169619573 CG8839 FBtr0087957|FBtr0087959|FBtr0087958|FBtr0087960 12339608|12339608|12339608|12339608 12339892|12339892|12339892|12339892 2R - 12339725 12339984 stop_codon CG8839 FlyBase G22425.1 CCAACTTCAATCAGGATCGACTTTGTTTGGCCGTTGCCGAGGAATTGGAGCGAGCCTTTGGCGGTTGGGCCAAGCCCGAAGTTCGGCTCTAGGAGCAGTCTCAAACGTGCAAGTATGCAGCTTAGCTAGCTTTTAGATAGTAGTGGTCAGGTTAACGTCCTGGTCTCCCCCCACCCATTACTAACTACCCCTACCCACCCGAGCATTCGCCTGGCGATGAAAGGTATTCCTTGTGTACTCCAGTGCCTCATTGTAATATC 87 12339868 0.978622762 29 83 564 0.962616822 1.53571597 0.261682243 0.16091954 0.317757009 87 2 2 103 2R:12339725-12339984 6 CG8839 FBtr0087958|FBtr0087960|FBtr0087957|FBtr0087959 12339608|12339608|12339608|12339608 12339892|12339892|12339892|12339892 GCAGCT 6mer2-7 dme-miR-980-3p 2R - 12339720 12339900 stop_codon CG8839 FlyBase G17019.1 GGCTCTAGGAGCAGTCTCAAACGTGCAAGTATGCAGCTTAGCTAGCTTTTAGATAGTAGTGGTCAGGTTAACGTCCTGGTCTCCCCCCACCCATTACTAACTACCCCTACCCACCCGAGCATTCGCCTGGCGATGAAAGGTATTCCTTGTGTACTCCAGTGCCTCATTGTAATATCAATTT 50 12339869 0.861418317 23 47 316 0.934210526 1.851258349 0.25 0.44 0.631578947 50 5 0 71 2R:12339720-12339900 6 22.5 1234 FBgn0033717 1014.353333 58.28666667 87.84 0.02218162 0.386023104 0.256147541 0 1 0.5 0.01 dme-miR-252-5p 7mer-m8 GTACTTA 2R 12425347 12425353 + 2R_12425347_12425353_+ 0.588299917 0.588299917 0.588299917 0 CG8520 FBtr0303222|FBtr0087926 12425250|12425250 12425459|12425459 2R + 12425333 12425376 3'utr CG8520 FlyBase G15212.1 ATTCACAATATCTTGTACTTACAAATTTCATATCGAAAATGCAA 16 12425346 0.939407031 2 16 150 1 1.342422681 0.045454545 0.25 0.454545455 16 0 0 22 2R:12425333-12425376 7 CG8520 FBtr0303222|FBtr0087926 12425250|12425250 12425459|12425459 GTACTTA 7mer-m8 dme-miR-252-5p 2R + 12425335 12425367 3'utr CG8520 FlyBase G11545.1 TCACAATATCTTGTACTTACAAATTTCATATCG 13 12425346 0.727559962 2 12 101 1 1.255272505 0.111111111 0.230769231 0.444444444 13 0 0 18 2R:12425335-12425367 7 14 1235 FBgn0033734 185.89 13.06 20.03333333 0.075313357 1.071975498 0.698835275 1 1 1 0.01 dme-miR-7-5p 6mer2-7 TCTTCC 2R 12432109 12432114 - 2R_12432109_12432114_- 1 0.999999974 0.999999987 0 DUBAI FBtr0087951|FBtr0087950 12431925|12431445 12432342|12432342 2R - 12432072 12432118 3'utr DUBAI FlyBase G22444.1 TGTTTCTTCCTTTTCTCCTTGATCCTTCGGCCCGTTGCCCCAAAAAT 13 12432099 0.940388236 6 12 132 0.928571429 1.113943352 0.071428571 0.076923077 0.142857143 13 1 0 13 2R:12432072-12432118 6 DUBAI FBtr0087950|FBtr0087951 12431445|12431925 12432342|12432342 TCTTCC 6mer2-7 dme-miR-7-5p 2R - 12432053 12432109 3'utr DUBAI FlyBase G17033.1 CTTTTCTCCTTGATCCTTCGGCCCGTTGCCCCAAAAATCATTATACTCATCCACTCA 5 12432099 0.986776311 3 5 44 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2R:12432053-12432109 1 4.5 1236 FBgn0033738 614.18 18.92666667 29.05666667 0.007326842 0.237759775 0.154869795 -15 -15 -15 0.01 dme-miR-1008-3p 8mer-A1 AGCTGTGA 2R 12436888 12436895 + 2R_12436888_12436895_+ 0.643562576 0.643562542 0.643562559 7.07E-08 CG30051 FBtr0114521 12436846 12436990 2R + 12436864 12436958 3'utr CG30051 FlyBase G15218.1 ACATGCAGTTAAAAGCACAAGTAGAGCTGTGAAATTATATGTTATGCTTTAAATGGATTTTCCTGTCATCTAGATGTAGTTTGCTGCACAGCTCT 35 12436885 0.965363005 11 31 303 0.894736842 1.531478917 0.289473684 0.085714286 0.157894737 35 4 0 34 2R:12436864-12436958 8 CG30051 FBtr0114521 12436846 12436990 AGCTGTGA 8mer-A1 dme-miR-1008-3p 2R + 12436864 12436956 3'utr CG30051 FlyBase G11549.1 ACATGCAGTTAAAAGCACAAGTAGAGCTGTGAAATTATATGTTATGCTTTAAATGGATTTTCCTGTCATCTAGATGTAGTTTGCTGCACAGCT 25 12436898 0.787843206 12 23 182 0.925 1.267171728 0.2 0.44 0.65 25 2 1 37 2R:12436864-12436956 8 16.5 1237 FBgn0050051 28.33333333 5.406666667 8.236666667 0.582352941 3.051787916 2.003237556 3 -10 -3.5 0.01 dme-miR-79-3p 7mer-m8 TAGCTTT 2R 12452116 12452122 + 2R_12452116_12452122_+ 0.620204031 0.620204031 0.620204031 0 Dyb FBtr0305077|FBtr0100298|FBtr0087929|FBtr0308613|FBtr0087930 12452039|12452039|12451987|12452039|12451987 12452916|12452916|12452916|12452916|12452916 2R + 12452028 12452156 stop_codon Dyb FlyBase G15221.1 GCAGAAGAACTAAGAACTGGCTACCAGTGGAAACCGCAGGACTGGGAATCTCCAGAGGCAGCTGGATGGATGAAGACGAATTCTCGCTTAGCTTTCTACCTTACCTTAACTCATACGTTGACTTAGAGC 22 12452115 0.983257715 12 22 141 1 1.361727836 0.260869565 0.045454545 0.086956522 22 0 0 23 2R:12452028-12452156 7 Dyb FBtr0087930|FBtr0087929|FBtr0308613|FBtr0305077|FBtr0100298 12451987|12451987|12452039|12452039|12452039 12452916|12452916|12452916|12452916|12452916 TAGCTTT 7mer-m8 dme-miR-79-3p 2R + 12452071 12452134 3'utr Dyb FlyBase G11550.1 GGGAATCTCCAGAGGCAGCTGGATGGATGAAGACGAATTCTCGCTTAGCTTTCTACCTTACCTT 17 12452115 0.98766672 5 17 151 1 1.380211242 0.083333333 0.294117647 0.5 17 0 0 24 2R:12452071-12452134 7 13 1238 FBgn0033739 253.3333333 9.266666667 14.15666667 0.051315789 1.402877698 0.918295267 1 1 1 0.01 dme-miR-33-5p 6mer2-7 AATGCA 2R 12464944 12464949 + 2R_12464944_12464949_+ 1 1 1 0 Lac FBtr0087933 12464880 12465630 2R + 12464881 12464959 3'utr Lac FlyBase G15229.1 AGCCAATGGGCCCACGGCCGTCGACTCCAAGCGCTTCAGGTCCAATCCATCAACCAGCCCTCGAATGCATAAAACATAT 17 12464948 0.957507981 7 13 59 0.80952381 0.753327667 0.047619048 0.235294118 0.380952381 17 2 2 17 2R:12464881-12464959 6 Lac FBtr0087933 12464880 12465630 AATGCA 6mer2-7 dme-miR-33-5p 2R + 12464872 12464957 stop_codon Lac FlyBase G11558.1 CGCCAGATAAGCCAATGGGCCCACGGCCGTCGACTCCAAGCGCTTCAGGTCCAATCCATCAACCAGCCCTCGAATGCATAAAACAT 17 12464946 0.998399383 5 16 44 1 1.431363764 0 0.352941176 0.592592593 17 0 0 27 2R:12464872-12464957 6 9 1239 FBgn0010238 279.02 15.78666667 24.22666667 0.032255752 0.570101351 0.371491469 -4 -2 -3 0.01 dme-miR-184-3p 6mer2-7 CCGTCC 2R 12465246 12465251 + 2R_12465246_12465251_+ 1 1 1 0 Lac FBtr0087933 12464880 12465630 2R + 12464976 12465277 3'utr Lac FlyBase G15230.1 GAAAACAAACATCGTGTAACCGCGCAATAGATGTCTCAAACGATTTCGGACACACCAACCCACATCCAGTTCTCAGTTCGTTTTGTAGCTTCTGCTTCCGTTTCCGTATAGTCCAGCCCAATTTTTGTACGTCCAATATTATGTCTTAAGTTAAGTATGATAAGTGAAGGGCCAACGATAACTAGACTATAATTTATTAGCACCCTAGAGCCGAACTCAAACCGAAATTAGACTCCAGCCCAGCCGTAAACGATGCATTTCACCTTGATCCCGTCCGTTTTGCTTTCTGATCTGGCACTGTA 852 12465244 0.954398896 52 806 7154 0.953712633 1.881252939 0.128254581 0.170187793 0.318225651 852 36 12 989 2R:12464976-12465277 6 Lac FBtr0087933 12464880 12465630 CCGTCC 6mer2-7 dme-miR-184-3p 2R + 12465016 12465303 3'utr Lac FlyBase G11559.1 CGATTTCGGACACACCAACCCACATCCAGTTCTCAGTTCGTTTTGTAGCTTCTGCTTCCGTTTCCGTATAGTCCAGCCCAATTTTTGTACGTCCAATATTATGTCTTAAGTTAAGTATGATAAGTGAAGGGCCAACGATAACTAGACTATAATTTATTAGCACCCTAGAGCCGAACTCAAACCGAAATTAGACTCCAGCCCAGCCGTAAACGATGCATTTCACCTTGATCCCGTCCGTTTTGCTTTCTGATCTGGCACTGTATATGTTTTAAATATTTTAATCTAAGC 512 12465244 0.985407996 44 490 4033 0.963824289 2.270678836 0.111111111 0.349609375 0.569767442 512 25 3 746 2R:12465016-12465303 6 498.5 1240 FBgn0010238 279.02 15.78666667 24.22666667 1.786610279 31.57728041 20.57649972 2 2 2 0.01 dme-miR-1003-3p 6mer2-7 TGTGAG 2R 12465564 12465569 + 2R_12465564_12465569_+ 1 1 1 0 Lac FBtr0087933 12464880 12465630 2R + 12465557 12465604 3'utr Lac FlyBase G15233.1 GTGTGGGTGTGAGTAAAATCAATTTCGACTTTGTAACAAAAAAAAAAA 8 12465587 0.978898311 4 8 59 1 0.903089987 0.125 0 0 8 0 0 8 2R:12465557-12465604 6 Lac FBtr0087933 12464880 12465630 TGTGAG 6mer2-7 dme-miR-1003-3p 2R + 12465558 12465603 3'utr Lac FlyBase G11562.1 TGTGGGTGTGAGTAAAATCAATTTCGACTTTGTAACAAAAAAAAAA 13 12465589 0.970090328 4 13 93 1 1.278753601 0 0.307692308 0.526315789 13 0 0 19 2R:12465558-12465603 6 3 1241 FBgn0010238 279.02 15.78666667 24.22666667 0.010751917 0.190033784 0.12383049 -23 -25 -24 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2R 12507934 12507940 - 2R_12507934_12507940_- 0.808782919 0.808818836 0.808800877 2.54E-05 vis FBtr0087945|FBtr0087945|FBtr0087944|FBtr0087944 12507894|12507894|12507894|12507894 12508268|12508268|12508268|12508268 2R - 12507925 12507954 3'utr vis FlyBase G22491.1 GTGTACACTACTGATACTTAAATAAAACAA 5 12507943 0.798321824 2 5 32 1 0.698970004 0.6 0 0 5 0 0 5 2R:12507925-12507954 7 vis FBtr0087945|FBtr0087945|FBtr0087944|FBtr0087944 12507894|12507894|12507894|12507894 12508268|12508268|12508268|12508268 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2R - 12507928 12507970 3'utr vis FlyBase G17062.1 TTTTAAACTTAACATTGTGTACACTACTGATACTTAAATAAAA 6 12507943 0.982665454 2 5 40 1 1.041392685 0.272727273 0.333333333 0.636363636 6 0 0 11 2R:12507928-12507970 7 4.5 1242 FBgn0033748 6.173333333 0.356666667 0.556666667 0.728941685 12.61682243 8.083832335 3 3 3 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2R 12511757 12511763 - 2R_12511757_12511763_- 0.706569248 0.808818836 0.757694042 0.072301386 achi FBtr0339635|FBtr0339635|FBtr0087942|FBtr0087942|FBtr0087943|FBtr0087943 12511532|12511532|12511532|12511532|12511532|12511532 12512070|12512070|12512070|12512070|12512070|12512070 2R - 12511728 12511820 3'utr achi FlyBase G22494.1 AACAAATCGACTTAGTTTTGGACCTGACTCTTTTAAACTTAACATGTACACTACTGATACTTAAATAAAACATAAACAAGCATTTGAAATACA 12 12511766 0.985463607 6 12 97 1 1.113943352 0.153846154 0.083333333 0.153846154 12 0 0 13 2R:12511728-12511820 7 achi FBtr0339635|FBtr0339635|FBtr0087942|FBtr0087942|FBtr0087943|FBtr0087943 12511532|12511532|12511532|12511532|12511532|12511532 12512070|12512070|12512070|12512070|12512070|12512070 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2R - 12511730 12511817 3'utr achi FlyBase G17065.1 AAATCGACTTAGTTTTGGACCTGACTCTTTTAAACTTAACATGTACACTACTGATACTTAAATAAAACATAAACAAGCATTTGAAATA 8 12511766 0.980265247 6 8 60 1 0.954242509 0 0.125 0.222222222 8 0 0 9 2R:12511730-12511817 7 4.5 1243 FBgn0033749 292.4933333 16.57 25.38 0.015384966 0.271575136 0.177304965 3 3 3 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 2R 12563256 12563261 + 2R_12563256_12563261_+ 1 1 1 0 fra FBtr0087821|FBtr0339649|FBtr0087822 12563118|12563118|12563118 12564184|12564184|12564184 2R + 12563199 12563366 3'utr fra FlyBase G15273.1 CTGTTTTATTTTATTGATTTAACTCGAATTTGTGAAATGCAGTGAACCGACTTGAATTGTGTTTCCCTCCAGCGAGGTTCGTTTAGCTTAAGTTAAACAAATGTGCGATATATTAATGACCGAAAAGAATTGTAAATACGAACGACGCCGCCATATAAATTTTTAAGT 537 12563261 0.906356551 27 516 4357 0.962204724 2.00788996 0.247244094 0.137802607 0.270866142 537 19 5 611 2R:12563199-12563366 6 fra FBtr0339649|FBtr0087822|FBtr0087821 12563118|12563118|12563118 12564184|12564184|12564184 TGTGTT 6mer3-8 dme-miR-317-3p 2R + 12563211 12563357 3'utr fra FlyBase G11584.2 ATTGATTTAACTCGAATTTGTGAAATGCAGTGAACCGACTTGAATTGTGTTTCCCTCCAGCGAGGTTCGTTTAGCTTAAGTTAAACAAATGTGCGATATATTAATGACCGAAAAGAATTGTAAATACGAACGACGCCGCCATATAAA 387 12563261 0.937597371 22 376 3107 0.974182444 2.053846427 0.244406196 0.354005168 0.569707401 387 11 4 566 2R:12563211-12563357 6 319.5 1244 FBgn0011592 435.29 8.333333333 12.78666667 0.73399343 38.34 24.98696559 -5 -5 -5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2R 12563742 12563747 + 2R_12563742_12563747_+ 1 1 1 0 fra FBtr0087821|FBtr0339649|FBtr0087822 12563118|12563118|12563118 12564184|12564184|12564184 2R + 12563664 12563760 3'utr fra FlyBase G15278.1 AGAACGTACTTTTAATCTATTGTAACCCAATCAAACAATCAAAATCATTCTATCTAGACTTGTCCCCTAAAGTGTTCTTCTAGTTTGTTTATCCATT 74 12563741 0.993668423 11 64 798 0.88372093 1.403692338 0.093023256 0.148648649 0.26744186 74 8 2 76 2R:12563664-12563760 6 fra FBtr0339649|FBtr0087822|FBtr0087821 12563118|12563118|12563118 12564184|12564184|12564184 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 12563704 12563810 3'utr fra FlyBase G11586.1 AAAATCATTCTATCTAGACTTGTCCCCTAAAGTGTTCTTCTAGTTTGTTTATCCATTCATACGTATGAGTTTGATACGTGCCATTCAATGATTTGTCGCCAATCCAA 66 12563741 0.990837369 13 63 649 0.918367347 1.255272505 0.051020408 0.378787879 0.581632653 66 4 4 90 2R:12563704-12563810 6 44.5 1245 FBgn0011592 435.29 8.333333333 12.78666667 0.102230697 5.34 3.480187696 1 1 1 0.01 dme-miR-980-3p 6mer3-8 GGCAGC 2R 12575627 12575632 - 2R_12575627_12575632_- 1 1 1 0 Sin3A FBtr0303565|FBtr0087889|FBtr0087890|FBtr0339651|FBtr0087887|FBtr0347014|FBtr0339650|FBtr0087888|FBtr0304683|FBtr0303566 12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238 12575974|12578533|12575974|12577703|12575974|12578162|12575974|12577560|12575974|12577560 2R - 12575403 12575639 3'utr Sin3A FlyBase G22507.1 TTACGACGGCAGCGTCCTGTTTTATTGATGCGCTTTTAGAATTAAGATATAAAGTTTATACGCCTAGAGCCACATACACCTTAAACACAATCGCAAGACCACAATTTAAGTCACGGATATTTTTAACGATTTTGCACTAGAAACCGATCGAGACAGTTGTGCTAGTAACTAGGAACCAGAACACGTCTGTTTAGTGTTTTAAGATTTTTTAAAACCAAGCTCTTTTACTTTATCATA 514 12575604 0.969973749 43 501 4872 0.976109215 2.280274774 0.232081911 0.110894942 0.220136519 514 12 2 572 2R:12575403-12575639 6 Sin3A FBtr0303566|FBtr0304683|FBtr0087888|FBtr0339650|FBtr0347014|FBtr0087887|FBtr0339651|FBtr0087890|FBtr0087889|FBtr0303565 12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238 12577560|12575974|12577560|12575974|12578162|12575974|12577703|12575974|12578533|12575974 GGCAGC 6mer3-8 dme-miR-980-3p 2R - 12575433 12575643 3'utr Sin3A FlyBase G17075.2 AATTTTACGACGGCAGCGTCCTGTTTTATTGATGCGCTTTTAGAATTAAGATATAAAGTTTATACGCCTAGAGCCACATACACCTTAAACACAATCGCAAGACCACAATTTAAGTCACGGATATTTTTAACGATTTTGCACTAGAAACCGATCGAGACAGTTGTGCTAGTAACTAGGAACCAGAACACGTCTGTTTAGTGTTTTAAGATTT 313 12575604 0.982530763 32 304 3055 0.974683544 2.187520721 0.261603376 0.357827476 0.575949367 313 10 2 462 2R:12575433-12575643 6 14.5 1246 FBgn0022764 4529.02 67.97 103.85 0.003201576 0.21332941 0.139624458 -28 -28 -28 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 2R 12575718 12575724 - 2R_12575718_12575724_- 0.782911824 0.782911824 0.782911824 0 Sin3A FBtr0303565|FBtr0087889|FBtr0087890|FBtr0339651|FBtr0087887|FBtr0347014|FBtr0339650|FBtr0087888|FBtr0304683|FBtr0303566 12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238 12575974|12578533|12575974|12577703|12575974|12578162|12575974|12577560|12575974|12577560 2R - 12575658 12575952 3'utr Sin3A FlyBase G22508.1 CGGCAGTGGTCGCTGCATGGCCAGATTCTTCATTCACATGACGACAATGAGAAGATGTGGGATGAATTGCCTGCATTGAAATAAATAGTGTTTTAAATGTGATACCAGTTCCTCGACGCGGTCATCGAGATTGCAGCTATACCAACGCGCGATCGACTGTTTAATGTCCGGCATGGCATTGGGCTCTGGAAATTGATTGATGAACGAAGGAAAGCTCTTTTTCATATTGTACAAAAAGTCATTTAATCTTAGGCGAAAGTGCTCCTAAATAAGAATTTTATAGTCTTACGTTGCA 413 12575726 0.840210234 60 385 2778 0.939516129 2.066325925 0.221774194 0.157384988 0.298387097 413 27 3 466 2R:12575658-12575952 7 Sin3A FBtr0303566|FBtr0304683|FBtr0087888|FBtr0339650|FBtr0347014|FBtr0087887|FBtr0339651|FBtr0087890|FBtr0087889|FBtr0303565 12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238 12577560|12575974|12577560|12575974|12578162|12575974|12577703|12575974|12578533|12575974 GTACAAA 7mer-A1 dme-miR-305-5p 2R - 12575667 12575952 3'utr Sin3A FlyBase G17076.1 CGGCAGTGGTCGCTGCATGGCCAGATTCTTCATTCACATGACGACAATGAGAAGATGTGGGATGAATTGCCTGCATTGAAATAAATAGTGTTTTAAATGTGATACCAGTTCCTCGACGCGGTCATCGAGATTGCAGCTATACCAACGCGCGATCGACTGTTTAATGTCCGGCATGGCATTGGGCTCTGGAAATTGATTGATGAACGAAGGAAAGCTCTTTTTCATATTGTACAAAAAGTCATTTAATCTTAGGCGAAAGTGCTCCTAAATAAGAATTTTATAGTCT 271 12575726 0.984678798 50 234 1867 0.871536524 1.760924848 0.214105793 0.332103321 0.544080605 271 46 5 346 2R:12575667-12575952 7 102 1247 FBgn0022764 4529.02 67.97 103.85 0.022521428 1.500662057 0.982185845 2 2 2 0.01 dme-miR-33-5p 6mer3-8 CAATGC 2R 12576069 12576074 - 2R_12576069_12576074_- 1 1 1 0 Sin3A FBtr0087889|FBtr0339651|FBtr0347014|FBtr0087888|FBtr0303566 12575238|12575238|12575238|12575238|12575238 12578533|12577703|12578162|12577560|12577560 2R - 12576059 12576208 3'utr Sin3A FlyBase G22510.1 GTTCCGGCGGTCAATTCCGCGCCATCAGGCTCAGTTTCAACGGTGAACAATGTACAGGGCTCGGCGGCAGTATCCTCAACTTCCCACTCGATGTGCAACAGTAGCATTTTGTCCGCGGACTCCACCACCAATACCAATGCGTCAGCACAG 25 12576076 0.948718114 13 24 101 0.933333333 1.447158031 0.3 0.2 0.333333333 25 2 0 28 2R:12576059-12576208 6 Sin3A FBtr0303566|FBtr0087888|FBtr0347014|FBtr0339651|FBtr0087889 12575238|12575238|12575238|12575238|12575238 12577560|12577560|12578162|12577703|12578533 CAATGC 6mer3-8 dme-miR-33-5p 2R - 12576062 12576170 3'utr Sin3A FlyBase G17077.1 AACGGTGAACAATGTACAGGGCTCGGCGGCAGTATCCTCAACTTCCCACTCGATGTGCAACAGTAGCATTTTGTCCGCGGACTCCACCACCAATACCAATGCGTCAGCA 16 12576077 0.986292657 8 16 63 1 1.361727836 0.173913043 0.375 0.565217391 16 0 0 23 2R:12576062-12576170 6 7 1248 FBgn0022764 4529.02 67.97 103.85 0.001545588 0.102986612 0.067404911 2 3 2.5 0.01 dme-miR-33-5p 6mer3-8 CAATGC 2R 12576360 12576365 - 2R_12576360_12576365_- 1 0.999046672 0.999523336 0.000674085 Sin3A FBtr0087889|FBtr0339651|FBtr0347014|FBtr0087888|FBtr0303566 12575238|12575238|12575238|12575238|12575238 12578533|12577703|12578162|12577560|12577560 2R - 12576311 12576429 3'utr Sin3A FlyBase G22512.1 ATGTCAGCGAGCAACAGCAGCAGAACTGCGTCGACTGGCTGCTGGGCAAGACGGCAGACCAAATCAATGCCAGCGGCTGGGGATCCGCCAGCAAAACCAAGACGGTACAGCAGAAGGAT 27 12576366 0.955944138 8 26 64 1 1.462397998 0.034482759 0.115384615 0.206896552 26 0 0 29 2R:12576311-12576429 6 Sin3A FBtr0303566|FBtr0087888|FBtr0347014|FBtr0339651|FBtr0087889 12575238|12575238|12575238|12575238|12575238 12577560|12577560|12578162|12577703|12578533 CAATGC 6mer3-8 dme-miR-33-5p 2R - 12576348 12576414 3'utr Sin3A FlyBase G17079.1 AGCAGCAGAACTGCGTCGACTGGCTGCTGGGCAAGACGGCAGACCAAATCAATGCCAGCGGCTGGGG 11 12576390 0.850234937 5 11 33 1 1.278753601 0.157894737 0.545454545 0.736842105 11 0 0 19 2R:12576348-12576414 6 11.5 1249 FBgn0022764 4529.02 67.97 103.85 0.002539181 0.169192291 0.110736639 1 25 13 0.01 dme-miR-2a-2-5p 7mer-m1 GATGAGG 2R 12611362 12611368 + 2R_12611362_12611368_+ 0.825582373 0.825582373 0.825582373 0 Amph FBtr0087828|FBtr0333099|FBtr0333100 12611088|12611088|12611088 12612068|12612068|12612068 2R + 12611356 12611407 3'utr Amph FlyBase G15296.1 CACACAGATGAGGAATGAGAGAGAGAATATTTTGAAAATGTTTCAAACATTA 8 12611385 0.976809888 3 7 48 0.888888889 0.602059991 0 0.125 0.222222222 8 0 1 8 2R:12611356-12611407 7 Amph FBtr0087828|FBtr0333099|FBtr0333100 12611088|12611088|12611088 12612068|12612068|12612068 GATGAGG 7mer-m1 dme-miR-2a-2-5p 2R + 12611361 12611396 3'utr Amph FlyBase G11596.1 AGATGAGGAATGAGAGAGAGAATATTTTGAAAATGT 5 12611384 0.957886951 4 4 30 0.833333333 0.698970004 0 0.2 0.333333333 5 1 0 5 2R:12611361-12611396 7 3.5 1250 FBgn0027356 371.21 14.13 21.53333333 0.009428625 0.247699929 0.1625387 -23 -22 -22.5 0.01 dme-miR-33-5p 7mer-m1 AATGCAC 2R 12616087 12616093 + 2R_12616087_12616093_+ 0.829692068 0.829692068 0.829692068 0 CG45086 FBtr0344532|FBtr0344531 12613656|12613656 12619820|12619820 2R + 12616010 12616097 5'utr-coding CG45086 FlyBase G15300.1 AGCAATAGCAATAGCCAAAGAGAGCCTGGATCGTAAGCGCTGGAGGAGGTCTGCAGAGCGAGCAAAGCCGAAGTACAAATGCACCAAT 13 12616089 0.994925438 5 12 26 0.888888889 1.204119983 0.166666667 0.307692308 0.5 13 2 0 16 2R:12616010-12616097 7 CG45086 FBtr0344531|FBtr0344532 12613656|12613656 12619820|12619820 AATGCAC 7mer-m1 dme-miR-33-5p 2R + 12615988 12616092 5'utr-coding CG45086 FlyBase G11601.1 AACTTAGCGTAGACCCGTAATTAGCAATAGCAATAGCCAAAGAGAGCCTGGATCGTAAGCGCTGGAGGAGGTCTGCAGAGCGAGCAAAGCCGAAGTACAAATGCA 12 12616089 0.935843116 7 9 37 0.782608696 0.954242509 0.086956522 0.583333333 0.782608696 12 4 1 18 2R:12615988-12616092 6 4 1251 FBgn0266487 1140.346667 45.66 70.03666667 0.003507705 0.08760403 0.057112941 -2 -2 -2 0.01 dme-miR-965-3p 6mer2-7 ACGCTT 2R 12616865 12616870 + 2R_12616865_12616870_+ 1 1 1 0 CG45086 FBtr0344532|FBtr0344531 12613656|12613656 12619820|12619820 2R + 12616848 12616888 3'utr CG45086 FlyBase G15301.1 ACTTGAATGCCATCAAAACGCTTTGGGACGATGCTGGCATC 22 12616871 0.772459595 4 22 100 1 1.397940009 0.36 0.136363636 0.24 22 0 0 25 2R:12616848-12616888 6 CG45086 FBtr0344531|FBtr0344532 12613656|12613656 12619820|12619820 ACGCTT 6mer2-7 dme-miR-965-3p 2R + 12616848 12616909 3'utr CG45086 FlyBase G11604.1 ACTTGAATGCCATCAAAACGCTTTGGGACGATGCTGGCATCCAGGAGTGCTATGATCGTCGT 9 12616871 0.959263823 3 8 43 0.9 0.954242509 0.3 0.111111111 0.2 9 1 0 9 2R:12616848-12616909 6 14 1252 FBgn0266487 1140.346667 45.66 70.03666667 0.012276968 0.306614104 0.199895293 -6 -6 -6 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2R 12619174 12619180 + 2R_12619174_12619180_+ 0.521223855 0.521223855 0.521223855 0 CG45086 FBtr0344532|FBtr0344531 12613656|12613656 12619820|12619820 2R + 12619137 12619195 stop_codon CG45086 FlyBase G15306.1 TTTGGTCTAAACTGGATTTGGATCGAAAAACTATTTTTGTGATTTTTATACAAACACAC 34 12619172 0.865569687 9 33 412 0.976744186 1.62324929 0 0.176470588 0.348837209 34 1 0 42 2R:12619137-12619195 7 CG45086 FBtr0344531|FBtr0344532 12613656|12613656 12619820|12619820 TGTGATT 7mer-m1 dme-miR-308-3p 2R + 12619137 12619189 stop_codon CG45086 FlyBase G11608.1 TTTGGTCTAAACTGGATTTGGATCGAAAAACTATTTTTGTGATTTTTATACAA 18 12619173 0.993389353 5 18 219 1 1.431363764 0 0.388888889 0.592592593 18 0 0 27 2R:12619137-12619189 7 24 1253 FBgn0266487 1140.346667 45.66 70.03666667 0.021046232 0.525624179 0.342677645 2 1 1.5 0.01 dme-miR-988-3p 6mer3-8 ACAAGG 2R 12620790 12620795 + 2R_12620790_12620795_+ 0.999998949 0.999997571 0.99999826 9.19E-07 Galphaq FBtr0087831|FBtr0304955|FBtr0087833 12619145|12619145|12619145 12621242|12623197|12621242 2R + 12620780 12620832 3'utr Galphaq FlyBase G15312.1 AATTTAATATACAAGGATAACTAAATGAGACGCACATAAATAGAAAACCCCAT 12 12620805 0.932819984 3 9 33 0.8 0.77815125 0.066666667 0.25 0.4 12 2 1 12 2R:12620780-12620832 6 Galphaq FBtr0087833|FBtr0304955|FBtr0087831 12619145|12619145|12619145 12621242|12623197|12621242 ACAAGG 6mer3-8 dme-miR-988-3p 2R + 12620763 12620818 3'utr Galphaq FlyBase G11612.1 TTTTATAATTTTAGTTTAATTTAATATACAAGGATAACTAAATGAGACGCACATAA 13 12620805 0.990580816 3 13 49 1 1.301029996 0 0.461538462 0.65 13 0 0 20 2R:12620763-12620818 6 11 1254 FBgn0004435 2624.776667 94.95333333 145.51 0.004190833 0.115846381 0.075596179 -15 -15 -15 0.01 dme-miR-184-3p 8mer-A1 TCCGTCCA 2R 12621531 12621538 + 2R_12621531_12621538_+ 0.631136385 0.631136385 0.631136385 0 Galphaq FBtr0304955 12619145 12623197 2R + 12621497 12621551 3'utr Galphaq FlyBase G15313.1 GACATTCACACACTGACATACATATATATAGTTTTCCGTCCAATGAATTGCATCA 41 12621530 0.986135704 6 40 339 0.979591837 1.681241237 0.306122449 0.170731707 0.306122449 41 1 0 48 2R:12621497-12621551 8 Galphaq FBtr0304955 12619145 12623197 TCCGTCCA 8mer-A1 dme-miR-184-3p 2R + 12621511 12621545 3'utr Galphaq FlyBase G11613.1 GACATACATATATATAGTTTTCCGTCCAATGAATT 23 12621530 0.699414063 3 21 186 0.896551724 1.414973348 0.413793103 0.260869565 0.413793103 23 3 0 26 2R:12621511-12621545 8 31.5 1255 FBgn0004435 2624.776667 94.95333333 145.51 0.012001021 0.331741908 0.216479967 1 1 1 0.01 dme-miR-2a-2-5p 7mer-m8 TGATGAG 2R 12628557 12628563 + 2R_12628557_12628563_+ 0.658999343 0.658999343 0.658999343 0 CG17760 FBtr0110824 12628520 12628619 2R + 12628547 12628602 3'utr CG17760 FlyBase G15325.1 TAAATCATATTGATGAGTAACAACCTTTGTGTATCATATTTTAAAAATAGGGAAAT 18 12628573 0.993119634 8 14 171 0.80952381 1.230448921 0 0.166666667 0.285714286 18 4 0 17 2R:12628547-12628602 7 CG17760 FBtr0110824 12628520 12628619 TGATGAG 7mer-m8 dme-miR-2a-2-5p 2R + 12628548 12628599 3'utr CG17760 FlyBase G11619.1 AAATCATATTGATGAGTAACAACCTTTGTGTATCATATTTTAAAAATAGGGA 23 12628573 0.66638718 9 18 175 0.857142857 1.477121255 0.171428571 0.391304348 0.6 23 5 0 30 2R:12628548-12628599 7 6.5 1256 FBgn0033756 1012.683333 81.65 126.09 0.006418591 0.079608083 0.05155048 -16 -16 -16 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 12628846 12628852 - 2R_12628846_12628852_- 0.801970437 0.801970437 0.801970437 0 muskelin FBtr0087886|FBtr0087886|FBtr0087886|FBtr0333103|FBtr0333103|FBtr0333103 12628695|12628695|12628695|12628695|12628695|12628695 12629027|12629027|12629027|12629027|12629027|12629027 2R - 12628818 12628862 3'utr muskelin FlyBase G22558.1 ATGATTTTATTGTGATAGTTCACGTGTACTGAAACCCCGGCTAAA 35 12628837 0.786825647 7 34 301 0.977272727 1.33243846 0.386363636 0.228571429 0.386363636 35 0 1 43 2R:12628818-12628862 7 muskelin FBtr0333103|FBtr0333103|FBtr0333103|FBtr0087886|FBtr0087886|FBtr0087886 12628695|12628695|12628695|12628695|12628695|12628695 12629027|12629027|12629027|12629027|12629027|12629027 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 12628818 12628882 3'utr muskelin FlyBase G17109.1 ATGCAAAGCATGACATATATATGATTTTATTGTGATAGTTCACGTGTACTGAAACCCCGGCTAAA 22 12628838 0.90473748 7 20 158 0.935483871 1.462397998 0.35483871 0.272727273 0.483870968 22 2 0 29 2R:12628818-12628882 7 25 1257 FBgn0033757 131.3333333 5.313333333 8.116666667 0.19035533 4.705144291 3.080082136 -15 -14 -14.5 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2R 12640418 12640424 + 2R_12640418_12640424_+ 0.808818836 0.808818836 0.808818836 0 Iswi FBtr0087843|FBtr0087843|FBtr0087842|FBtr0087842|FBtr0087841|FBtr0087841 12640336|12640336|12640336|12640336|12640336|12640336 12640628|12640628|12640628|12640628|12640628|12640628 2R + 12640341 12640472 3'utr Iswi FlyBase G15351.1 GACAAAGCAAACAGATATTTTTCTGAGATTCGGCTCTACACTCAGCACTAGGCAGTTAAATAGTTAAGACAAGCGATTACTTAAACATATTTTACTCTATATAGTTAATAGTTCATATCTCACGCCGGAAGC 67 12640417 0.972699139 19 64 402 0.966292135 1.633468456 0.101123596 0.23880597 0.426966292 67 2 1 86 2R:12640341-12640472 7 Iswi FBtr0087843|FBtr0087843|FBtr0087842|FBtr0087842|FBtr0087841|FBtr0087841 12640336|12640336|12640336|12640336|12640336|12640336 12640628|12640628|12640628|12640628|12640628|12640628 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2R + 12640358 12640437 3'utr Iswi FlyBase G11638.1 TTTTTCTGAGATTCGGCTCTACACTCAGCACTAGGCAGTTAAATAGTTAAGACAAGCGATTACTTAAACATATTTTACTC 18 12640417 0.880993099 7 17 109 0.928571429 1.414973348 0.035714286 0.444444444 0.642857143 18 2 0 26 2R:12640358-12640437 7 16.5 1258 FBgn0011604 1337.66 45.99333333 70.94 0.012334973 0.358747645 0.232590922 1 1 1 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 12640583 12640589 + 2R_12640583_12640589_+ 0.661615645 0.661615645 0.661615645 0 Iswi FBtr0087843|FBtr0087842|FBtr0087841 12640336|12640336|12640336 12640628|12640628|12640628 2R + 12640538 12640622 3'utr Iswi FlyBase G15352.1 ACATTACTATTGCGTGCCGCTGTATTCTATTCCAAATAATTGTATTGTGTTCTAAGACTATAATCATTATATTTATATAAATCAA 64 12640582 0.719276264 16 63 566 0.973684211 1.86923172 0.118421053 0.1875 0.315789474 64 2 0 74 2R:12640538-12640622 7 Iswi FBtr0087843|FBtr0087842|FBtr0087841 12640336|12640336|12640336 12640628|12640628|12640628 TGTGTTC 7mer-m8 dme-miR-317-3p 2R + 12640504 12640623 3'utr Iswi FlyBase G11640.1 AAGTTTTTTTAAACACCCGCCTACACATCCGACTACATTACTATTGCGTGCCGCTGTATTCTATTCCAAATAATTGTATTGTGTTCTAAGACTATAATCATTATATTTATATAAATCAAC 44 12640582 0.987468251 16 43 378 0.985714286 1.838849091 0.2 0.409090909 0.628571429 44 1 0 69 2R:12640504-12640623 7 27 1259 FBgn0011604 1337.66 45.99333333 70.94 0.020184501 0.5870416 0.380603327 1 1 1 0.01 dme-miR-2a-2-5p 6mer2-7 GATGAG 2R 12659919 12659924 - 2R_12659919_12659924_- 1 1 1 0 nemy FBtr0339740|FBtr0087870|FBtr0087867|FBtr0087869|FBtr0302151|FBtr0339742|FBtr0339741|FBtr0087868 12659495|12659495|12659495|12659495|12659495|12659495|12659495|12659587 12660243|12660243|12660243|12660243|12660243|12660243|12660243|12660243 2R - 12659911 12660018 3'utr nemy FlyBase G22574.1 ACATCATACACTTAGACTACTCCATATGGCTATAATCAAAACCTTTGCCCACTTTCAATCTCTCAGTAGGTGTGTAGGATTAGGAATCTCAGCAGATGAGCAGAAGAC 24 12659947 0.949103642 12 22 163 0.923076923 1.079181246 0.076923077 0.083333333 0.153846154 24 1 1 24 2R:12659911-12660018 6 nemy FBtr0302151|FBtr0339742|FBtr0339741|FBtr0087868|FBtr0339740|FBtr0087870|FBtr0087867|FBtr0087869 12659495|12659495|12659495|12659587|12659495|12659495|12659495|12659495 12660243|12660243|12660243|12660243|12660243|12660243|12660243|12660243 GATGAG 6mer2-7 dme-miR-2a-2-5p 2R - 12659915 12659952 3'utr nemy FlyBase G17121.1 TAGGTGTGTAGGATTAGGAATCTCAGCAGATGAGCAGA 8 12659945 0.65022374 5 7 48 0.866666667 1.113943352 0.333333333 0.625 0.8 8 2 0 13 2R:12659915-12659952 6 6 1260 FBgn0261673 7.666666667 0.46 0.703333333 0.782608696 13.04347826 8.530805687 23 21 22 0.01 dme-miR-34-5p 6mer2-7 ACTGCC 2R 1266501 1266506 + 2R_1266501_1266506_+ 1 1 1 0 CG40191 FBtr0113825 1266025 1267747 2R + 1266460 1266520 3'utr CG40191 FlyBase G12545.1 ATACATACAAGCTGTAATATGTTGCGCTATACTTCAAAGTTACTGCCTTACACTGACCGAA 22 1266499 0.961511361 6 22 164 1 1.414973348 0.115384615 0.181818182 0.307692308 22 0 0 26 2R:1266460-1266520 6 CG40191 FBtr0113825 1266025 1267747 ACTGCC 6mer2-7 dme-miR-34-5p 2R + 1266458 1266512 3'utr CG40191 FlyBase G9611.1 TTATACATACAAGCTGTAATATGTTGCGCTATACTTCAAAGTTACTGCCTTACAC 14 1266499 0.980579351 7 14 96 1 1.322219295 0.142857143 0.357142857 0.571428571 14 0 0 21 2R:1266458-1266512 6 15.5 1261 FBgn0058191 1436.35 98.49 150.6766667 0.010791242 0.157376383 0.102869279 2 2 2 0.01 dme-miR-252-5p 6mer3-8 GTACTT 2R 12670961 12670966 - 2R_12670961_12670966_- 1 1 1 0 CG42708 FBtr0302976|FBtr0302977|FBtr0302975|FBtr0302974|FBtr0302973|FBtr0344191|FBtr0302972 12670481|12670481|12670481|12670481|12670604|12670481|12670604 12671175|12671175|12671175|12671175|12671175|12671175|12671175 2R - 12670817 12670996 3'utr CG42708 FlyBase G22583.1 CGAGGCGGATCCACTGCACGAGCGGCATTTGTACTTGTACTTGGTAGCGCTTAGTTAGCCACAAAAATTCCATGTTATCCTACGAAACAATGACAATAATCTTAACGGATATCTAACTTTCCCACATAACTGGGGTCTGTGACCTGCCTAAATGTATTGCATTCGTACTTGTCAATTGAT 105 12670968 0.984096722 21 102 806 0.959016393 2.068185862 0.073770492 0.161904762 0.278688525 105 5 0 117 2R:12670817-12670996 6 CG42708 FBtr0302974|FBtr0302975|FBtr0302977|FBtr0302976|FBtr0302972|FBtr0344191|FBtr0302973 12670481|12670481|12670481|12670481|12670604|12670481|12670604 12671175|12671175|12671175|12671175|12671175|12671175|12671175 GTACTT 6mer3-8 dme-miR-252-5p 2R - 12670926 12670991 3'utr CG42708 FlyBase G17127.1 CGGATCCACTGCACGAGCGGCATTTGTACTTGTACTTGGTAGCGCTTAGTTAGCCACAAAAATTCC 30 12670968 0.986021563 6 29 243 0.977272727 1.633468456 0.045454545 0.266666667 0.5 30 1 0 43 2R:12670926-12670991 6 54 1262 FBgn0261625 1259.506667 54.11 83.17333333 0.042873929 0.997967104 0.649246553 2 2 2 0.01 dme-miR-1006-3p 7mer-m8 CGAATTT 2R 12691440 12691446 - 2R_12691440_12691446_- 0.661614704 0.661614704 0.661614704 0 CG8768 FBtr0087871 12691306 12691537 2R - 12691421 12691461 3'utr CG8768 FlyBase G22611.1 AAGCGCAAATTAAAACGAATTTCTGCGATAGGGGGATTTAT 34 12691441 0.697862937 2 32 214 0.944444444 1.531478917 0.027777778 0.058823529 0.111111111 34 2 0 34 2R:12691421-12691461 7 CG8768 FBtr0087871 12691306 12691537 CGAATTT 7mer-m8 dme-miR-1006-3p 2R - 12691420 12691455 3'utr CG8768 FlyBase G17144.1 AAATTAAAACGAATTTCTGCGATAGGGGGATTTATG 26 12691441 0.682294446 3 25 158 0.971428571 1.531478917 0 0.230769231 0.428571429 26 1 0 34 2R:12691420-12691455 7 30 1263 FBgn0033769 43.33333333 4.476666667 6.923333333 0.692307692 6.701414743 4.333172845 -5 -5 -5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 12750677 12750683 + 2R_12750677_12750683_+ 0.801961606 0.801967816 0.801964711 4.38E-06 CG42663 FBtr0302645|FBtr0302645|FBtr0302645|FBtr0302644|FBtr0302644|FBtr0302644|FBtr0310576|FBtr0310576|FBtr0310576 12750597|12750597|12750597|12750597|12750597|12750597|12750597|12750597|12750597 12751545|12751545|12751545|12751545|12751545|12751545|12751545|12751545|12751545 2R + 12750651 12750763 3'utr CG42663 FlyBase G15384.1 TATTTAAAGATTTAAAAAGACTAAATTGTGATATATTCAAACAAAACAAAACCGAATCGAGAGTTACAGAAGCATTAAGAGATGATGGCCAGGATGAGCAGGCACGTTTTGTA 394 12750676 0.982193439 16 369 2739 0.936734694 1.36078269 0.026530612 0.198473282 0.357142857 393 12 19 459 2R:12750651-12750763 7 CG42663 FBtr0310576|FBtr0310576|FBtr0310576|FBtr0302644|FBtr0302644|FBtr0302644|FBtr0302645|FBtr0302645|FBtr0302645 12750597|12750597|12750597|12750597|12750597|12750597|12750597|12750597|12750597 12751545|12751545|12751545|12751545|12751545|12751545|12751545|12751545|12751545 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 12750652 12750762 3'utr CG42663 FlyBase G11663.1 ATTTAAAGATTTAAAAAGACTAAATTGTGATATATTCAAACAAAACAAAACCGAATCGAGAGTTACAGAAGCATTAAGAGATGATGGCCAGGATGAGCAGGCACGTTTTGT 290 12750676 0.825928625 16 271 1963 0.935323383 1.53379516 0.017412935 0.3 0.495024876 290 16 10 376 2R:12750652-12750762 7 323 1264 FBgn0261545 747.68 22.44 34.5 0.432002996 14.39393939 9.362318841 1 1 1 0.01 dme-miR-34-5p 8mer-A1 CACTGCCA 2R 12750827 12750834 + 2R_12750827_12750834_+ 0.678407974 0.678407974 0.678407974 0 CG42663 FBtr0302645|FBtr0302644|FBtr0310576 12750597|12750597|12750597 12751545|12751545|12751545 2R + 12750794 12750848 3'utr CG42663 FlyBase G15385.1 AAATTTTTGGATGATGTTTTACCTTGTAAGCGGCACTGCCAACTGTTCCCCCTAT 10 12750817 0.981057335 8 10 74 1 1.041392685 0 0.1 0.181818182 10 0 0 11 2R:12750794-12750848 8 CG42663 FBtr0310576|FBtr0302644|FBtr0302645 12750597|12750597|12750597 12751545|12751545|12751545 CACTGCCA 8mer-A1 dme-miR-34-5p 2R + 12750814 12750846 3'utr CG42663 FlyBase G11664.1 ACCTTGTAAGCGGCACTGCCAACTGTTCCCCCT 9 12750837 0.761680561 4 7 30 1 1.146128036 0.285714286 0.444444444 0.642857143 9 0 0 14 2R:12750814-12750846 8 6 1265 FBgn0261545 747.68 22.44 34.5 0.008024823 0.267379679 0.173913043 10 -10 0 0.01 dme-miR-7-5p 7mer-m8 GTCTTCC 2R 12751040 12751046 + 2R_12751040_12751046_+ 0.705950313 0.705950313 0.705950313 0 CG42663 FBtr0302645|FBtr0302644|FBtr0310576 12750597|12750597|12750597 12751545|12751545|12751545 2R + 12751020 12751092 3'utr CG42663 FlyBase G15386.1 GTAGGTGAACCAAGACTGTAGTCTTCCGCACAAGTCGAGTGTATTCGTAGGACTTGGTTAGAGTTAACCACAT 26 12751038 0.716306019 7 24 131 0.935483871 1.462397998 0.129032258 0.115384615 0.258064516 26 2 0 29 2R:12751020-12751092 7 CG42663 FBtr0310576|FBtr0302644|FBtr0302645 12750597|12750597|12750597 12751545|12751545|12751545 GTCTTCC 7mer-m8 dme-miR-7-5p 2R + 12751009 12751050 3'utr CG42663 FlyBase G11665.1 ATGGTCACGTAGTAGGTGAACCAAGACTGTAGTCTTCCGCAC 14 12751038 0.911693186 4 14 59 1 1.342422681 0.227272727 0.5 0.681818182 14 0 0 22 2R:12751009-12751050 7 16 1266 FBgn0261545 747.68 22.44 34.5 0.021399529 0.713012478 0.463768116 2 2 2 0.01 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 12751141 12751148 + 2R_12751141_12751148_+ 0.625364269 0.625364269 0.625364269 0 CG42663 FBtr0302645|FBtr0302644|FBtr0310576 12750597|12750597|12750597 12751545|12751545|12751545 2R + 12751094 12751199 3'utr CG42663 FlyBase G15387.1 AGCTAATCCGGATTAGTGCTCCTCAGACACAACAGCAGTTGAACATTTGCATTTAAGGGTGAAATATTTCAAAGTGTTTACGATGCAGTATATGATGCATATATAT 91 12751140 0.829062939 8 89 684 0.981481481 2.025305865 0.518518519 0.153846154 0.287037037 91 2 0 106 2R:12751094-12751199 8 CG42663 FBtr0310576|FBtr0302644|FBtr0302645 12750597|12750597|12750597 12751545|12751545|12751545 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 12751094 12751203 3'utr CG42663 FlyBase G11667.1 AGCTAATCCGGATTAGTGCTCCTCAGACACAACAGCAGTTGAACATTTGCATTTAAGGGTGAAATATTTCAAAGTGTTTACGATGCAGTATATGATGCATATATATATAT 63 12751140 0.931687536 7 60 479 0.953488372 1.612783857 0.453488372 0.253968254 0.453488372 63 3 1 82 2R:12751094-12751203 8 58 1267 FBgn0261545 747.68 22.44 34.5 0.077573293 2.584670232 1.68115942 1 1 1 0.01 dme-miR-2535b-3p 6mer2-7 CGTGAG 2R 12751453 12751458 + 2R_12751453_12751458_+ 1 1 1 0 CG42663 FBtr0302645|FBtr0302644|FBtr0310576 12750597|12750597|12750597 12751545|12751545|12751545 2R + 12751225 12751515 3'utr CG42663 FlyBase G15388.1 ATATATATATATGTATACGGTTTCTAAGCGAACATTAGACGACAACCATAACAATAAACTGTACATAGCAGTCGTTCTTAAAGCTAATGATAATGATAATGACAAGCTCTTCTTTAACCGTAGTTAGCTCCTCCGGGCTGCTGCCACCGACTACTTCATTGCAGCAGCCCGTTTCCTAAGCATATATACATACATACTTACACTATATAGAACAGAACGCATTATGATCGTGAGGAGGGAATCTAGACGTAAGCTCGTATGAACATTATAAATGTATTTTCTTAGCGTAGC 67 12751449 0.972085064 27 64 385 0.948051948 1.86332286 0.220779221 0.119402985 0.233766234 67 4 0 73 2R:12751225-12751515 6 CG42663 FBtr0310576|FBtr0302644|FBtr0302645 12750597|12750597|12750597 12751545|12751545|12751545 CGTGAG 6mer2-7 dme-miR-2535b-3p 2R + 12751415 12751518 3'utr CG42663 FlyBase G11669.1 TACATACTTACACTATATAGAACAGAACGCATTATGATCGTGAGGAGGGAATCTAGACGTAAGCTCGTATGAACATTATAAATGTATTTTCTTAGCGTAGCGAG 16 12751449 0.968468152 8 16 94 1 1.301029996 0.4 0.1875 0.35 16 0 0 20 2R:12751415-12751518 6 13 1268 FBgn0261545 747.68 22.44 34.5 0.017387117 0.579322638 0.376811594 4 4 4 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 12849494 12849499 - 2R_12849494_12849499_- 0.999911711 1 0.999955856 6.24E-05 CG17574 FBtr0306580|FBtr0087816|FBtr0306583|FBtr0344926|FBtr0306579|FBtr0306581|FBtr0337029|FBtr0306582|FBtr0331979 12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356 12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736 2R - 12849436 12849518 3'utr CG17574 FlyBase G22629.1 AAGCAAATCCAAAACGAAAACCAAACTGAACTACATGAAGTGTTAATTGTAATAAACCAGTGAAGTGCACATCAAATGCAACT 24 12849492 0.984319297 7 22 111 0.911764706 1.491361694 0.117647059 0.333333333 0.529411765 24 3 0 31 2R:12849436-12849518 6 CG17574 FBtr0306579|FBtr0344926|FBtr0087816|FBtr0306583|FBtr0306580|FBtr0331979|FBtr0306582|FBtr0337029|FBtr0306581 12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356 12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 12849466 12849508 3'utr CG17574 FlyBase G17160.1 AAAACGAAAACCAAACTGAACTACATGAAGTGTTAATTGTAAT 5 12849483 0.951090627 3 5 24 1 1 0.2 0.4 0.7 5 0 0 10 2R:12849466-12849508 6 6.5 1269 FBgn0033777 586.8266667 68.93 105.5833333 0.011076525 0.094298564 0.061562747 -7 -16 -11.5 0.01 dme-miR-11-3p 7mer-m1 TGTGATG 2R 12849573 12849579 - 2R_12849573_12849579_- 0.535593563 0.535593563 0.535593563 0 CG17574 FBtr0306580|FBtr0087816|FBtr0306583|FBtr0344926|FBtr0306579|FBtr0306581|FBtr0337029|FBtr0306582|FBtr0331979 12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356 12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736 2R - 12849552 12849644 3'utr CG17574 FlyBase G22629.2 AACTCCAAACTCCTGGTAAAAAACCAAGTGAAAGCGATCGCACAACGAGCCATTTTTATATTCCATGTGATGTATGTAAAGTGTACATATAAC 35 12849585 0.984357853 14 31 306 0.957446809 1.653212514 0.042553191 0.285714286 0.468085106 35 2 0 45 2R:12849552-12849644 7 CG17574 FBtr0306579|FBtr0344926|FBtr0087816|FBtr0306583|FBtr0306580|FBtr0331979|FBtr0306582|FBtr0337029|FBtr0306581 12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356 12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736 TGTGATG 7mer-m1 dme-miR-11-3p 2R - 12849544 12849622 3'utr CG17574 FlyBase G17161.1 ACCAAGTGAAAGCGATCGCACAACGAGCCATTTTTATATTCCATGTGATGTATGTAAAGTGTACATATAACTTAAGCGC 32 12849585 0.848008398 13 30 251 0.897959184 1.643452676 0 0.34375 0.571428571 32 5 0 44 2R:12849544-12849622 7 25 1270 FBgn0033777 586.8266667 68.93 105.5833333 0.042602018 0.362686784 0.236779795 6 6 6 0.01 dme-miR-184-3p 6mer3-8 TCCGTC 2R 12849703 12849708 - 2R_12849703_12849708_- 1 1 1 0 CG17574 FBtr0306580|FBtr0087816|FBtr0306583|FBtr0344926|FBtr0306579|FBtr0306581|FBtr0337029|FBtr0306582|FBtr0331979 12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356 12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736 2R - 12849659 12849758 stop_codon CG17574 FlyBase G22630.1 CAATCCCCACTTTGGCCAGTGAAATCGCACTGTGAACTGAGGATCCCCTTTCCGTCTCGTTATAGCTTTTTTACTCAGCTGAACACTTTACTTTCCATGT 490 12849709 0.794385924 20 483 3738 0.988391376 2.298125005 0.615257048 0.173469388 0.328358209 490 5 2 596 2R:12849659-12849758 6 CG17574 FBtr0306579|FBtr0344926|FBtr0087816|FBtr0306583|FBtr0306580|FBtr0331979|FBtr0306582|FBtr0337029|FBtr0306581 12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356 12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736 TCCGTC 6mer3-8 dme-miR-184-3p 2R - 12849670 12849738 stop_codon CG17574 FlyBase G17162.1 GAAATCGCACTGTGAACTGAGGATCCCCTTTCCGTCTCGTTATAGCTTTTTTACTCAGCTGAACACTTT 340 12849709 0.954244996 10 338 2607 0.996062992 2.704150517 0.572834646 0.376470588 0.582677165 340 2 0 506 2R:12849670-12849738 6 398 1271 FBgn0033777 586.8266667 68.93 105.5833333 0.678224121 5.773973596 3.769534333 1 1 1 0.01 dme-miR-980-5p 7mer-A1 AAAAACA 2R 12870965 12870971 + 2R_12870965_12870971_+ 0.782911824 0.782911824 0.782911824 0 bic FBtr0087783|FBtr0087782 12870911|12870911 12871240|12871794 2R + 12870956 12870986 3'utr bic FlyBase G15406.1 ACCGAACACAAAAACATACATACAAAACATA 7 12870972 0.850528545 2 5 11 0.714285714 0.698970004 0 0 0 7 2 0 5 2R:12870956-12870986 7 bic FBtr0087783|FBtr0087782 12870911|12870911 12871240|12871794 AAAAACA 7mer-A1 dme-miR-980-5p 2R + 12870955 12871036 3'utr bic FlyBase G11684.1 CACCGAACACAAAAACATACATACAAAACATACGGGGCCAGGGAGCAAGACGAAGTGGCTGGCATACAGGGCAGAACCCACA 12 12870985 0.834062785 4 11 16 0.954545455 1.322219295 0.181818182 0.5 0.727272727 12 1 0 21 2R:12870955-12871036 7 4 1272 FBgn0000181 17984.21667 2221.11 3402.376667 0.000222417 0.001800901 0.001175649 -7 -20 -13.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2R 12877458 12877463 - 2R_12877458_12877463_- 0.999999038 1 0.999999519 7.07E-07 Nmda1 FBtr0089878|FBtr0089877|FBtr0309294|FBtr0089875|FBtr0332883|FBtr0089876|FBtr0089873|FBtr0089874|FBtr0309295 12877092|12877092|12877092|12877092|12877092|12877092|12877092|12877092|12877092 12877654|12877654|12877654|12877654|12877654|12877654|12877654|12877654|12877654 2R - 12877420 12877586 3'utr Nmda1 FlyBase G22638.1 ATTGTTGTCGCGTAATCTCATCGGTGTGCTCCCCCAGTGGAGGTAATCTTCAACTAACGAATTACTCAAATACTTACAAATCTATCTACTTCGTGTTGTGTTTGCCCATTTTCCCCGTTTCCTTCTAGTTCTAAATGTCAACTAAGGCTATATGAACTACTTACTTT 42 12877466 0.986632358 23 40 359 0.961538462 1.698970004 0.211538462 0.166666667 0.326923077 42 2 0 50 2R:12877420-12877586 6 Nmda1 FBtr0309295|FBtr0089874|FBtr0089873|FBtr0089876|FBtr0332883|FBtr0089875|FBtr0309294|FBtr0089877|FBtr0089878 12877092|12877092|12877092|12877092|12877092|12877092|12877092|12877092|12877092 12877654|12877654|12877654|12877654|12877654|12877654|12877654|12877654|12877654 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2R - 12877371 12877479 3'utr Nmda1 FlyBase G17166.1 ATTTTCCCCGTTTCCTTCTAGTTCTAAATGTCAACTAAGGCTATATGAACTACTTACTTTTTGTTATGTATGTTTTATTGTTGCTTAAGTTGAGGCGCAAACCAAGTGG 12 12877434 0.984213921 9 12 102 1 1.176091259 0.133333333 0.25 0.4 12 0 0 15 2R:12877371-12877479 6 6.5 1273 FBgn0013305 2589.41 187.14 285.2633333 0.002510224 0.034733355 0.022785964 3 -29 -13 0.01 dme-miR-318-3p 7mer-m8 CCCAGTG 2R 12877548 12877554 - 2R_12877548_12877554_- 0.705949892 0.705949892 0.705949892 0 Nmda1 FBtr0089878|FBtr0089877|FBtr0309294|FBtr0089875|FBtr0332883|FBtr0089876|FBtr0089873|FBtr0089874|FBtr0309295 12877092|12877092|12877092|12877092|12877092|12877092|12877092|12877092|12877092 12877654|12877654|12877654|12877654|12877654|12877654|12877654|12877654|12877654 2R - 12877420 12877586 3'utr Nmda1 FlyBase G22638.1 ATTGTTGTCGCGTAATCTCATCGGTGTGCTCCCCCAGTGGAGGTAATCTTCAACTAACGAATTACTCAAATACTTACAAATCTATCTACTTCGTGTTGTGTTTGCCCATTTTCCCCGTTTCCTTCTAGTTCTAAATGTCAACTAAGGCTATATGAACTACTTACTTT 42 12877565 0.986632358 23 40 359 0.961538462 1.698970004 0.211538462 0.166666667 0.326923077 42 2 0 50 2R:12877420-12877586 7 Nmda1 FBtr0309295|FBtr0089874|FBtr0089873|FBtr0089876|FBtr0332883|FBtr0089875|FBtr0309294|FBtr0089877|FBtr0089878 12877092|12877092|12877092|12877092|12877092|12877092|12877092|12877092|12877092 12877654|12877654|12877654|12877654|12877654|12877654|12877654|12877654|12877654 CCCAGTG 7mer-m8 dme-miR-318-3p 2R - 12877495 12877595 3'utr Nmda1 FlyBase G17167.1 TACACGAATATTGTTGTCGCGTAATCTCATCGGTGTGCTCCCCCAGTGGAGGTAATCTTCAACTAACGAATTACTCAAATACTTACAAATCTATCTACTTC 23 12877566 0.991751118 8 16 167 0.694444444 0.920818754 0.305555556 0.434782609 0.638888889 23 9 2 25 2R:12877495-12877595 7 10 1274 FBgn0013305 2589.41 187.14 285.2633333 0.003861884 0.05343593 0.035055329 11 12 11.5 0.01 dme-miR-980-3p 6mer2-7 GCAGCT 2R 12877622 12877627 - 2R_12877622_12877627_- 1 1 1 0 Nmda1 FBtr0089878|FBtr0089877|FBtr0309294|FBtr0089875|FBtr0332883|FBtr0089876|FBtr0089873|FBtr0089874|FBtr0309295 12877092|12877092|12877092|12877092|12877092|12877092|12877092|12877092|12877092 12877654|12877654|12877654|12877654|12877654|12877654|12877654|12877654|12877654 2R - 12877596 12877780 stop_codon Nmda1 FlyBase G22639.1 ATGGGCGGCGAGCACAAATACTCTATCAGTCCCGAGGAGTACATCTTTGCGGCACTAAACCTCTACCTGGACATCATCAATATCTTCATGTACATTCTGACTATAATCGGCGCATCGCGCGACTAAGTTCCGCTCTATTTCCAAATATTGTTTGCAGCTTAATCGGGTTATTCAGTAACCTGGAA 63 12877629 0.984001133 19 56 438 0.875 1.544068044 0.0875 0.222222222 0.3875 63 9 1 70 2R:12877596-12877780 6 Nmda1 FBtr0309295|FBtr0089874|FBtr0089873|FBtr0089876|FBtr0332883|FBtr0089875|FBtr0309294|FBtr0089877|FBtr0089878 12877092|12877092|12877092|12877092|12877092|12877092|12877092|12877092|12877092 12877654|12877654|12877654|12877654|12877654|12877654|12877654|12877654|12877654 GCAGCT 6mer2-7 dme-miR-980-3p 2R - 12877597 12877644 3'utr Nmda1 FlyBase G17168.1 ATTTCCAAATATTGTTTGCAGCTTAATCGGGTTATTCAGTAACCTGGA 18 12877630 0.664931472 9 17 172 0.909090909 1.301029996 0 0.166666667 0.318181818 18 2 0 20 2R:12877597-12877644 6 17.5 1275 FBgn0013305 2589.41 187.14 285.2633333 0.006758296 0.093512878 0.061346826 2 3 2.5 0.01 dme-miR-14-3p 7mer-m8 AAGACTG 2R 12883098 12883104 + 2R_12883098_12883104_+ 0.671764936 0.671753894 0.671759415 7.78E-06 Aats-asp FBtr0339391|FBtr0087784|FBtr0332882 12882904|12882904|12882904 12883168|12883168|12883168 2R + 12883020 12883117 3'utr Aats-asp FlyBase G15419.1 CCCAATCGTGAGTGTTTTATCCTTCTTCTCAAGACTAACATGCTGCAAAGTTGTTAAACAACGAGAAAAATGTACGGGAAGACTGCCTAGAGTCAAAT 30 12883090 0.936546566 7 27 113 0.942857143 1.217483944 0.114285714 0.133333333 0.257142857 30 1 1 33 2R:12883020-12883117 7 Aats-asp FBtr0332882|FBtr0087784|FBtr0339391 12882904|12882904|12882904 12883168|12883168|12883168 AAGACTG 7mer-m8 dme-miR-14-3p 2R + 12883079 12883121 3'utr Aats-asp FlyBase G11700.1 AACGAGAAAAATGTACGGGAAGACTGCCTAGAGTCAAATTTAT 20 12883107 0.831912073 4 19 62 0.964285714 1.431363764 0.214285714 0.3 0.5 20 1 0 27 2R:12883079-12883121 7 23 1276 FBgn0002069 853.6433333 54.38666667 82.66666667 0.026943337 0.422897769 0.278225806 8 -9 -0.5 0.01 dme-bantam-3p 6mer2-7 GATCTC 2R 12924544 12924549 + 2R_12924544_12924549_+ 1 1 1 0 CG13319 FBtr0087788|FBtr0300890 12924346|12924420 12924664|12924664 2R + 12924513 12924642 5'utr CG13319 FlyBase G15454.2 ACTCTACGCACTCCATCAGCTAACTATCTGGGATCTCCGATTCCCGATCTCCGCTCAGACGTCATGCGGCGGCCGAGTGAGCACGAACTTTAAACGTGTATCGGTGATACGAATTTTGTACAATAAATTT 92 12924540 0.980347566 19 76 578 0.844036697 1.264817823 0.100917431 0.152173913 0.28440367 92 13 4 92 2R:12924513-12924642 6 CG13319 FBtr0300890|FBtr0087788 12924420|12924346 12924664|12924664 GATCTC 6mer2-7 dme-bantam-3p 2R + 12924466 12924653 5'utr CG13319 FlyBase G11726.1 CGTCTATTTCGGGGACCGGCGGCTACCCCACGGACGCAGCTTCACGTACTCTACGCACTCCATCAGCTAACTATCTGGGATCTCCGATTCCCGATCTCCGCTCAGACGTCATGCGGCGGCCGAGTGAGCACGAACTTTAAACGTGTATCGGTGATACGAATTTTGTACAATAAATTTATTGCCCTAAG 94 12924540 0.984274652 21 86 571 0.938356164 1.835690571 0.212328767 0.404255319 0.616438356 94 8 1 137 2R:12924466-12924653 6 38 1277 FBgn0033781 91.88 17.2 26.15333333 0.413582934 2.209302326 1.452969666 4 4 4 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 2R 12934259 12934264 - 2R_12934259_12934264_- 1 1 1 0 CG13322 FBtr0087803|FBtr0087804|FBtr0087805 12934232|12934232|12934232 12934751|12934751|12934751 2R - 12934253 12934289 3'utr CG13322 FlyBase G22666.1 TTACATACTTAACTGTAAGTAGTGGATGTGAATTAAA 7 12934267 0.829755756 3 7 60 1 0.84509804 0 0 0 7 0 0 7 2R:12934253-12934289 6 CG13322 FBtr0087805|FBtr0087804|FBtr0087803 12934232|12934232|12934232 12934751|12934751|12934751 ATGTGA 6mer3-8 dme-miR-1003-3p 2R - 12934246 12934291 3'utr CG13322 FlyBase G17187.1 AATTACATACTTAACTGTAAGTAGTGGATGTGAATTAAATAAAACC 6 12934267 0.98507652 3 5 45 0.857142857 0.77815125 0 0.166666667 0.285714286 6 1 0 6 2R:12934246-12934291 6 6 1278 FBgn0033784 342.93 20 30.73333333 0.017496282 0.3 0.195227766 3 3 3 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 2R 12934398 12934403 - 2R_12934398_12934403_- 1 1 1 0 CG13322 FBtr0087803|FBtr0087804|FBtr0087805 12934232|12934232|12934232 12934751|12934751|12934751 2R - 12934376 12934440 3'utr CG13322 FlyBase G22668.1 AGCTCAATCATCGGAAACCACATGTGTATATAACTAATTGACTTGAAGGCGGAGCAGAAGGTAGA 36 12934403 0.973285421 6 35 208 0.977272727 1.33243846 0.272727273 0.222222222 0.363636364 36 0 1 43 2R:12934376-12934440 6 CG13322 FBtr0087805|FBtr0087804|FBtr0087803 12934232|12934232|12934232 12934751|12934751|12934751 TTGACT 6mer3-8 dme-miR-1012-3p 2R - 12934375 12934421 3'utr CG13322 FlyBase G17188.1 ACATGTGTATATAACTAATTGACTTGAAGGCGGAGCAGAAGGTAGAC 25 12934403 0.972303646 4 23 135 0.903225806 1.146128036 0.032258065 0.24 0.387096774 25 2 1 28 2R:12934375-12934421 6 28.5 1279 FBgn0033784 342.93 20 30.73333333 0.08310734 1.425 0.927331887 0 0 0 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2R 12934462 12934467 - 2R_12934462_12934467_- 1 1 1 0 CG13322 FBtr0087803|FBtr0087804|FBtr0087805 12934232|12934232|12934232 12934751|12934751|12934751 2R - 12934455 12934507 3'utr CG13322 FlyBase G22669.1 CTGGCCGGAGCAACAACGGACGCATTTGTTTATGTAATTAAAGACTTATCGAC 7 12934459 0.962017095 5 6 33 1 1.041392685 0.090909091 0.428571429 0.636363636 7 0 0 11 2R:12934455-12934507 6 CG13322 FBtr0087805|FBtr0087804|FBtr0087803 12934232|12934232|12934232 12934751|12934751|12934751 AAGACT 6mer3-8 dme-miR-14-3p 2R - 12934445 12934476 3'utr CG13322 FlyBase G17189.1 ATGTAATTAAAGACTTATCGACAAGAATTTTG 11 12934470 0.759583719 6 9 68 0.846153846 0.740362689 0.307692308 0.181818182 0.307692308 11 1 1 11 2R:12934445-12934476 6 7.5 1280 FBgn0033784 342.93 20 30.73333333 0.021870353 0.375 0.244034707 -8 3 -2.5 0.01 dme-miR-184-5p 7mer-A1 GATAAGA 2R 12966173 12966179 - 2R_12966173_12966179_- 0.782911824 0.782911824 0.782911824 0 Psc FBtr0345375 12965995 12966517 2R - 12966143 12966297 3'utr Psc FlyBase G22677.1 ACACAATCCAGCCGAGTTTAGGCTGCCCCCCTTCGGTAGTAGTGAGCCAACGCTCTGTAAATATATAATGATATATACAAATGTCTAGACTTAGGAATTGTATTAAAAATAAACGGAGGATAAGACAGTGATTCAGAATCGATATATATATGCAG 196 12966169 0.942631067 17 189 778 0.959821429 2.33243846 0.107142857 0.117346939 0.227678571 196 9 0 215 2R:12966143-12966297 7 Psc FBtr0345375 12965995 12966517 GATAAGA 7mer-A1 dme-miR-184-5p 2R - 12966130 12966199 3'utr Psc FlyBase G17195.1 TGTATTAAAAATAAACGGAGGATAAGACAGTGATTCAGAATCGATATATATATGCAGTTATACGAATTAT 118 12966169 0.9431917 7 109 429 0.928176796 1.380211242 0.093922652 0.423728814 0.624309392 118 7 6 168 2R:12966130-12966199 7 142 1281 FBgn0005624 501.4 9.713333333 15.04 0.28320702 14.6190803 9.441489362 -10 -10 -10 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 2R 13007184 13007189 + 2R_13007184_13007189_+ 1 1 1 0 Su(z)2 FBtr0330613|FBtr0300387|FBtr0087793 13005840|13004375|13004375 13007802|13007911|13007802 2R + 13007173 13007273 3'utr Su(z)2 FlyBase G15478.1 TTCGTACACTCGAAAAAGGCTTTAGATTTTCGTACATTTATTCTCAACTTGCTCTTAGCTGATATTTTTTGTTTTGTTATCTTGTATATGGTCTGTACATA 54 13007194 0.75921551 7 52 416 0.954545455 1.322219295 0.151515152 0.166666667 0.318181818 54 1 2 63 2R:13007173-13007273 6 Su(z)2 FBtr0300387|FBtr0087793|FBtr0330613 13004375|13004375|13005840 13007911|13007802|13007802 GAAAAA 6mer3-8 dme-miR-980-5p 2R + 13007163 13007207 3'utr Su(z)2 FlyBase G11740.1 ATTTACGATATTCGTACACTCGAAAAAGGCTTTAGATTTTCGTAC 21 13007194 0.745434764 4 20 121 1 1.462397998 0.275862069 0.333333333 0.517241379 21 0 0 29 2R:13007163-13007207 6 31 1282 FBgn0265623 1008.286667 18.45 28.45666667 0.030745225 1.680216802 1.089375659 -10 -10 -10 0.01 dme-miR-283-5p 7mer-m8 TGATATT 2R 13007658 13007664 + 2R_13007658_13007664_+ 0.620203677 0.620203677 0.620203677 0 Su(z)2 FBtr0330613|FBtr0300387|FBtr0087793 13005840|13004375|13004375 13007802|13007911|13007802 2R + 13007616 13007689 3'utr Su(z)2 FlyBase G15481.1 TATCTAGTTGTATATGCGAGAAAAGGCTCGACTTATTTAAGCTGATATTGTACTGTTCGGATACCTTAACTAAT 18 13007671 0.985365425 8 17 142 0.95 1.278753601 0.25 0.111111111 0.2 18 1 0 19 2R:13007616-13007689 7 Su(z)2 FBtr0300387|FBtr0087793|FBtr0330613 13004375|13004375|13005840 13007911|13007802|13007802 TGATATT 7mer-m8 dme-miR-283-5p 2R + 13007621 13007681 3'utr Su(z)2 FlyBase G11741.1 AGTTGTATATGCGAGAAAAGGCTCGACTTATTTAAGCTGATATTGTACTGTTCGGATACCT 15 13007671 0.987056171 9 13 112 0.85 0.753327667 0.4 0.266666667 0.45 15 1 2 17 2R:13007621-13007681 7 12.5 1283 FBgn0265623 1008.286667 18.45 28.45666667 0.012397268 0.677506775 0.439264379 -13 -13 -13 0.01 dme-miR-995-5p 7mer-A1 ATTCGGA 2R 13142955 13142961 - 2R_13142955_13142961_- 0.778994884 0.782911824 0.780953354 0.002769667 Ack-like FBtr0330331|FBtr0330329 13142832|13142832 13143125|13143125 2R - 13142908 13143010 3'utr Ack-like FlyBase G22692.2 AGTAATTTGGAACTAACGTAATCACTGCTCGCCATTGGCTCCCTTCTTCATTCGGATCGATAGAATCTCAGCATGTACTTATTCACGCATGCTTGGTCTGCAT 105 13142950 0.847533605 17 99 670 0.953125 1.785329835 0.109375 0.171428571 0.3203125 105 5 1 122 2R:13142908-13143010 7 Ack-like FBtr0330329|FBtr0330331 13142832|13142832 13143125|13143125 ATTCGGA 7mer-A1 dme-miR-995-5p 2R - 13142902 13143029 3'utr Ack-like FlyBase G17208.1 TAAGCATGGGATAGGCTTAAGTAATTTGGAACTAACGTAATCACTGCTCGCCATTGGCTCCCTTCTTCATTCGGATCGATAGAATCTCAGCATGTACTTATTCACGCATGCTTGGTCTGCATGCAAGT 73 13142950 0.837169165 18 70 410 0.975609756 1.77815125 0.138211382 0.452054795 0.674796748 73 2 1 120 2R:13142902-13143029 7 49 1284 FBgn0263998 1708 42.31333333 64.85 0.028688525 1.158027415 0.755589823 -11 -11 -11 0.01 dme-bantam-3p 6mer2-7 GATCTC 2R 13163117 13163122 + 2R_13163117_13163122_+ 0.999999999 0.976588682 0.988294341 0.016554289 Nrk FBtr0087728 13162649 13163484 2R + 13163098 13163149 3'utr Nrk FlyBase G15511.1 TTATACCCTCTGATCTCTCGATCTCGATCGAATAGTCTGCCACAACGAACGC 17 13163128 0.973396519 6 17 110 1 1.301029996 0.35 0.176470588 0.3 17 0 0 20 2R:13163098-13163149 6 Nrk FBtr0087728 13162649 13163484 GATCTC 6mer2-7 dme-bantam-3p 2R + 13163099 13163150 3'utr Nrk FlyBase G11767.1 TATACCCTCTGATCTCTCGATCTCGATCGAATAGTCTGCCACAACGAACGCA 11 13163128 0.979659276 4 11 78 1 1.230448921 0.058823529 0.454545455 0.647058824 11 0 0 17 2R:13163099-13163150 6 14 1285 FBgn0020391 38.01666667 1.393333333 2.09 0.368259535 10.04784689 6.698564593 -11 -11 -11 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 13163173 13163179 + 2R_13163173_13163179_+ 0.661615511 0.661615511 0.661615511 0 Nrk FBtr0087728 13162649 13163484 2R + 13163157 13163195 3'utr Nrk FlyBase G15512.1 ACGTCTCGTATCCATATCTAGTCTGTAGATTAAGTTTAT 27 13163180 0.728612195 6 22 282 0.84375 0.954242509 0.0625 0.111111111 0.25 27 3 2 27 2R:13163157-13163195 7 Nrk FBtr0087728 13162649 13163484 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 13163158 13163193 3'utr Nrk FlyBase G11768.1 CGTCTCGTATCCATATCTAGTCTGTAGATTAAGTTT 14 13163180 0.724604605 5 14 138 1 1.278753601 0.105263158 0.285714286 0.473684211 14 0 0 19 2R:13163158-13163193 7 20.5 1286 FBgn0020391 38.01666667 1.393333333 2.09 0.539237177 14.71291866 9.80861244 -7 -7 -7 0.01 dme-bantam-3p 6mer3-8 TGATCT 2R 13170502 13170507 + 2R_13170502_13170507_+ 1 1 1 0 Spt-I FBtr0087731|FBtr0087729|FBtr0087730 13170480|13170480|13170480 13170744|13170744|13170744 2R + 13170320 13170609 stop_codon Spt-I FlyBase G15517.1 ATTGCTCGTGGAGTGGCTGTGGTACAGGCTGCCTACCTGCAGAACAGGGAACGCCAACCAGTCCGTCCCAGCATTCGCATTGCTGTCAACCGTTTGCTGGAGAGTTCGGAAATAGACAATGCGTTTGAGGTCATCGAGAGTGTTTCCAGCTCCGTCCTATAAGCCTTGTTGTTGGAAAGGAATGATCTTCTTTCGACAATGGCCTTGCTGTTAAGTTTTAAGGCCTGCTGGCCCCATCATTTTTTCATCACTTCTTCACGACCAGTCCAGTATGAATTGTTTAAGTTAAT 179 13170523 0.998902099 33 164 1320 0.917073171 1.672097858 0.263414634 0.134078212 0.243902439 179 14 3 188 2R:13170320-13170609 6 Spt-I FBtr0087730|FBtr0087729|FBtr0087731 13170480|13170480|13170480 13170744|13170744|13170744 TGATCT 6mer3-8 dme-bantam-3p 2R + 13170433 13170544 stop_codon Spt-I FlyBase G11772.1 AGACAATGCGTTTGAGGTCATCGAGAGTGTTTCCAGCTCCGTCCTATAAGCCTTGTTGTTGGAAAGGAATGATCTTCTTTCGACAATGGCCTTGCTGTTAAGTTTTAAGGCC 61 13170520 0.922327645 15 58 437 0.977011494 1.62838893 0.287356322 0.31147541 0.517241379 61 1 1 85 2R:13170433-13170544 6 36 1287 FBgn0086532 546.6266667 38.03 58.04666667 0.065858477 0.946621089 0.620190651 -21 -18 -19.5 0.01 dme-miR-8-3p 6mer3-8 CAGTAT 2R 13170587 13170592 + 2R_13170587_13170592_+ 1 1 1 0 Spt-I FBtr0087731|FBtr0087729|FBtr0087730 13170480|13170480|13170480 13170744|13170744|13170744 2R + 13170320 13170609 stop_codon Spt-I FlyBase G15517.1 ATTGCTCGTGGAGTGGCTGTGGTACAGGCTGCCTACCTGCAGAACAGGGAACGCCAACCAGTCCGTCCCAGCATTCGCATTGCTGTCAACCGTTTGCTGGAGAGTTCGGAAATAGACAATGCGTTTGAGGTCATCGAGAGTGTTTCCAGCTCCGTCCTATAAGCCTTGTTGTTGGAAAGGAATGATCTTCTTTCGACAATGGCCTTGCTGTTAAGTTTTAAGGCCTGCTGGCCCCATCATTTTTTCATCACTTCTTCACGACCAGTCCAGTATGAATTGTTTAAGTTAAT 179 13170585 0.998902099 33 164 1320 0.917073171 1.672097858 0.263414634 0.134078212 0.243902439 179 14 3 188 2R:13170320-13170609 6 Spt-I FBtr0087730|FBtr0087729|FBtr0087731 13170480|13170480|13170480 13170744|13170744|13170744 CAGTAT 6mer3-8 dme-miR-8-3p 2R + 13170566 13170612 3'utr Spt-I FlyBase G11773.1 ATCACTTCTTCACGACCAGTCCAGTATGAATTGTTTAAGTTAATAGC 20 13170585 0.961890933 4 17 150 0.875 1.447158031 0.0625 0.55 0.71875 20 4 0 28 2R:13170566-13170612 6 24 1288 FBgn0086532 546.6266667 38.03 58.04666667 0.043905652 0.631080726 0.413460434 2 2 2 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT 2R 13176721 13176726 - 2R_13176721_13176726_- 1 1 1 0 CG17724 FBtr0339516|FBtr0310499|FBtr0334468|FBtr0087771|FBtr0344197 13176092|13176092|13176551|13176551|13176551 13177352|13177424|13177424|13177424|13177424 2R - 13176667 13176810 3'utr CG17724 FlyBase G22742.1 AACGATTCCGTTTCGATGAAAAGGATAGCTCACTTTTGTAACTACCGGGAGCGTTCTCAAGAAATATACTTATAAATATAATTTGTTCCTTGCATAATGAGAGATAGACAGCTAGAGCGACTATGCAACGTATTTCATGTAGTA 202 13176706 0.952548742 16 193 992 0.953974895 1.880813592 0.112970711 0.143564356 0.276150628 202 9 2 228 2R:13176667-13176810 6 CG17724 FBtr0087771|FBtr0334468|FBtr0310499|FBtr0339516|FBtr0344197 13176551|13176551|13176092|13176092|13176551 13177424|13177424|13177424|13177352|13177424 GTTCCT 6mer2-7 dme-miR-276a-3p 2R - 13176553 13176744 3'utr CG17724 FlyBase G17244.1 TACTTATAAATATAATTTGTTCCTTGCATAATGAGAGATAGACAGCTAGAGCGACTATGCAACGTATTTCATGTAGTATTTATTCGATAAGTTCTCGATCTATTTATTTATTTTTGTTAACTATTTCCATTCGTGTGACCCGCCGCCACCTTTGTCATTACACTTTCTTTTGCCATGTTGTATATTCTTTAC 107 13176706 0.971563763 20 101 601 0.955696203 1.701855693 0.094936709 0.392523364 0.588607595 107 5 2 151 2R:13176553-13176744 6 43.5 1289 FBgn0033802 568.9 19.27666667 29.39333333 0.07646335 2.256614214 1.479927421 -20 -20 -20 0.01 dme-miR-995-5p 6mer2-7 ATTCGG 2R 13176977 13176982 - 2R_13176977_13176982_- 0.990211389 0.999958649 0.995085019 0.006892311 CG17724 FBtr0339516|FBtr0310499|FBtr0334468|FBtr0087771|FBtr0344197 13176092|13176092|13176551|13176551|13176551 13177352|13177424|13177424|13177424|13177424 2R - 13176939 13177023 3'utr CG17724 FlyBase G22744.1 AAACACACACACGCGAATGGATTTGAGGCGGAATCAAATGCATTCGGTTCACGGCAAACTTAAGAGCATCGTAAATTAAAATAAT 16 13177001 0.945059237 8 16 67 1 1.255272505 0.111111111 0.125 0.222222222 16 0 0 18 2R:13176939-13177023 6 CG17724 FBtr0087771|FBtr0334468|FBtr0310499|FBtr0339516|FBtr0344197 13176551|13176551|13176092|13176092|13176551 13177424|13177424|13177424|13177352|13177424 ATTCGG 6mer2-7 dme-miR-995-5p 2R - 13176933 13177021 3'utr CG17724 FlyBase G17246.1 ACACACACACGCGAATGGATTTGAGGCGGAATCAAATGCATTCGGTTCACGGCAAACTTAAGAGCATCGTAAATTAAAATAATTTTTAC 12 13177005 0.952605222 8 12 56 1 1.230448921 0 0.416666667 0.588235294 12 0 0 17 2R:13176933-13177021 6 4 1290 FBgn0033802 568.9 19.27666667 29.39333333 0.007031113 0.207504755 0.13608528 19 23 21 0.01 dme-miR-283-5p 8mer-A1 TGATATTA 2R 13177119 13177126 - 2R_13177119_13177126_- 0.592192292 0.592192292 0.592192292 0 CG17724 FBtr0339516|FBtr0310499|FBtr0334468|FBtr0087771|FBtr0344197 13176092|13176092|13176551|13176551|13176551 13177352|13177424|13177424|13177424|13177424 2R - 13177089 13177163 3'utr CG17724 FlyBase G22745.2 AGGAATATTAACTCAAACTTAAGCCAAGCTAACTCATTGATATTACCACACTGTTGGATGTGCATACGAAATTTA 96 13177127 0.980161189 8 93 660 0.972222222 1.720159303 0.12962963 0.125 0.222222222 96 2 1 105 2R:13177089-13177163 8 CG17724 FBtr0087771|FBtr0334468|FBtr0310499|FBtr0339516|FBtr0344197 13176551|13176551|13176092|13176092|13176551 13177424|13177424|13177424|13177352|13177424 TGATATTA 8mer-A1 dme-miR-283-5p 2R - 13177095 13177163 3'utr CG17724 FlyBase G17247.1 AGGAATATTAACTCAAACTTAAGCCAAGCTAACTCATTGATATTACCACACTGTTGGATGTGCATACGA 45 13177127 0.979371299 4 44 300 0.984375 1.498310554 0.078125 0.288888889 0.5 45 0 1 63 2R:13177095-13177163 8 65.5 1291 FBgn0033802 568.9 19.27666667 29.39333333 0.11513447 3.397890368 2.228396462 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 13227735 13227740 + 2R_13227735_13227740_+ 1 1 1 0 Dp FBtr0333149|FBtr0087740 13227169|13227169 13227745|13227745 2R + 13227698 13227793 3'utr Dp FlyBase G15567.1 TAATGTTATGGGTAATTGTCTCTTAATAATATAATATACCAAAACTGTACACAACCGCAGTGAAATGCAATTATTTTTAGAATGCCACGAGCAGTT 17 13227743 0.963835336 10 17 92 1 1.301029996 0.35 0.176470588 0.3 17 0 0 20 2R:13227698-13227793 6 Dp FBtr0087741|FBtr0087740|FBtr0333149 13227169|13227169|13227169 13228202|13227745|13227745 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 13227713 13227760 3'utr Dp FlyBase G11809.1 TTGTCTCTTAATAATATAATATACCAAAACTGTACACAACCGCAGTGA 11 13227743 0.911781041 3 11 39 1 1.342422681 0.090909091 0.454545455 0.727272727 11 0 0 22 2R:13227713-13227760 6 9 1292 FBgn0011763 1732.31 84.90333333 129.9733333 0.005195375 0.106002905 0.069244973 -8 -8 -8 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2R 13231806 13231812 - 2R_13231806_13231812_- 0.443131018 0.443131018 0.443131018 0 CG4670 FBtr0340493|FBtr0087760 13231756|13231756 13232064|13232064 2R - 13231758 13231903 3'utr CG4670 FlyBase G22787.1 GAACGAACAGTCCTCTTCCAGTTGTAGTCCCTAACCTAATCGCTTTTTACCACGACGATGCACCTGATTGCTTTATTCTTAGGCATGCAAATGTGATTTTTCCCTCCAGAAGTGACAGTTTGAATAAAAACGATCAATGCTAGACG 528 13231804 0.981135199 23 520 3749 0.983508246 2.214843848 0.337331334 0.200757576 0.367316342 528 8 3 656 2R:13231758-13231903 7 CG4670 FBtr0340493|FBtr0087760 13231756|13231756 13232064|13232064 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 13231766 13231862 3'utr CG4670 FlyBase G17284.1 GCTTTTTACCACGACGATGCACCTGATTGCTTTATTCTTAGGCATGCAAATGTGATTTTTCCCTCCAGAAGTGACAGTTTGAATAAAAACGATCAAT 345 13231804 0.989881363 12 341 2476 0.988527725 2.236369288 0.338432122 0.382608696 0.592734226 345 4 2 517 2R:13231766-13231862 7 365.5 1293 FBgn0033814 441.6733333 22.62666667 34.71666667 0.827534679 16.15350619 10.52808449 -8 -8 -8 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2R 13408076 13408082 - 2R_13408076_13408082_- 0.443131018 0.443131018 0.443131018 0 CG18278 FBtr0087716 13408040 13408169 2R - 13408055 13408134 3'utr CG18278 FlyBase G22804.1 AAAACCAAATTCAAGTCCGCTGGGCGCATATAGATTTCATATTCAGATATCATGTGATTTATGTTGCTATATACATAGTC 31 13408076 0.916453104 13 31 283 1 1.602059991 0.075 0.225806452 0.4 31 0 0 40 2R:13408055-13408134 7 CG18278 FBtr0087716 13408040 13408169 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 13408063 13408097 3'utr CG18278 FlyBase G17296.1 CATATTCAGATATCATGTGATTTATGTTGCTATAT 12 13408076 0.64236075 6 11 115 0.95 1.278753601 0.05 0.5 0.7 12 1 0 19 2R:13408063-13408097 7 18 1294 FBgn0033836 254.63 18.40666667 28.13666667 0.070690806 0.977906556 0.639734629 -6 -6 -6 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2R 13412803 13412809 - 2R_13412803_13412809_- 0.443131018 0.443131018 0.443131018 0 CG30059 FBtr0087715 13412767 13412896 2R - 13412790 13412861 3'utr CG30059 FlyBase G22812.1 AAAACCAAATTCAAGTCCGCTGGGCGCATATAGATTTCATATTCAGATATCATGTGATTTATGTTGCTATAT 29 13412803 0.94115204 9 26 262 0.894736842 1.531478917 0.026315789 0.275862069 0.447368421 29 4 0 34 2R:13412790-13412861 7 CG30059 FBtr0087715 13412767 13412896 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 13412793 13412849 3'utr CG30059 FlyBase G17301.1 AAGTCCGCTGGGCGCATATAGATTTCATATTCAGATATCATGTGATTTATGTTGCTA 18 13412803 0.665547843 6 14 158 0.80952381 0.929418926 0 0.166666667 0.285714286 18 3 1 17 2R:13412793-13412849 7 17.5 1295 FBgn0260475 435.0366667 31.53666667 48.24333333 0.040226494 0.554909629 0.362744421 -6 -6 -6 0.01 dme-bantam-3p 7mer-A1 GATCTCA 2R 13415490 13415496 - 2R_13415490_13415496_- 0.823349562 0.823349562 0.823349562 0 CG42321 FBtr0299763|FBtr0299755|FBtr0299757|FBtr0299762|FBtr0299761|FBtr0299754|FBtr0299764|FBtr0306698|FBtr0299758|FBtr0299759 13414976|13414976|13414976|13414976|13414976|13414976|13414976|13414976|13414976|13414976 13415517|13415517|13417569|13415517|13415517|13415517|13417569|13415517|13416931|13417569 2R - 13415482 13415519 stop_codon CG42321 FlyBase G22815.1 AAACCGAAAACGATGGGACTCTGGATCTCACGGTGCAC 13 13415498 0.951568484 4 12 57 0.888888889 1.204119983 0.722222222 0.307692308 0.5 13 2 0 16 2R:13415482-13415519 7 CG42321 FBtr0306698|FBtr0299764|FBtr0299762|FBtr0299761|FBtr0299755|FBtr0299759|FBtr0299754|FBtr0299757|FBtr0299758|FBtr0299763 13414976|13414976|13414976|13414976|13414976|13414976|13414976|13414976|13414976|13414976 13415517|13417569|13415517|13415517|13415517|13417569|13415517|13417569|13416931|13415517 GATCTCA 7mer-A1 dme-bantam-3p 2R - 13415470 13415518 stop_codon CG42321 FlyBase G17304.1 AACCGAAAACGATGGGACTCTGGATCTCACGGTGCACATGTATATAGGA 14 13415498 0.966578041 5 13 69 0.947368421 1.255272505 0.421052632 0.357142857 0.526315789 14 1 0 18 2R:13415470-13415518 7 13.5 1296 FBgn0259221 191.07 4.566666667 6.95 0.070654734 2.95620438 1.942446043 2 2 2 0.01 dme-miR-7-5p 6mer2-7 TCTTCC 2R 13417546 13417551 - 2R_13417546_13417551_- 1 1 1 0 CG42321 FBtr0299757|FBtr0299764|FBtr0299759 13414976|13414976|13414976 13417569|13417569|13417569 2R - 13417529 13417580 stop_codon CG42321 FlyBase G22817.1 TGCACATGTGAGGATGTGGACGATGGACTTCTTCCCTCATCGAAGGCAAATC 26 13417557 0.865026351 3 25 171 0.933333333 1.447158031 0.533333333 0.153846154 0.266666667 26 2 0 28 2R:13417529-13417580 6 CG42321 FBtr0299764|FBtr0299759|FBtr0299757 13414976|13414976|13414976 13417569|13417569|13417569 TCTTCC 6mer2-7 dme-miR-7-5p 2R - 13417530 13417574 stop_codon CG42321 FlyBase G17306.1 TGTGAGGATGTGGACGATGGACTTCTTCCCTCATCGAAGGCAAAT 17 13417557 0.922485591 2 17 116 1 1.380211242 0.666666667 0.294117647 0.5 17 0 0 24 2R:13417530-13417574 6 21 1297 FBgn0259221 191.07 4.566666667 6.95 0.109907364 4.598540146 3.021582734 6 6 6 0.01 dme-miR-317-3p 6mer2-7 GTGTTC 2R 13418341 13418346 - 2R_13418341_13418346_- 1 1 1 0 CG42321 FBtr0303100|FBtr0299756|FBtr0299760|FBtr0299765 13418077|13418077|13418077|13418077 13418982|13418982|13418982|13418982 2R - 13418335 13418387 3'utr CG42321 FlyBase G22820.1 AAACACTATTTTTTCTTGTCATTTGTTATATCCACCCACAAGTGTTCTTTCAT 15 13418339 0.755928961 4 14 142 0.933333333 1.146128036 0 0 0 15 1 0 14 2R:13418335-13418387 6 CG42321 FBtr0303100|FBtr0299756|FBtr0299765|FBtr0299760 13418077|13418077|13418077|13418077 13418982|13418982|13418982|13418982 GTGTTC 6mer2-7 dme-miR-317-3p 2R - 13418335 13418383 3'utr CG42321 FlyBase G17309.1 ACTATTTTTTCTTGTCATTTGTTATATCCACCCACAAGTGTTCTTTCAT 8 13418340 0.992283836 2 8 88 1 1 0 0.25 0.4 8 0 0 10 2R:13418335-13418383 6 8.5 1298 FBgn0259221 191.07 4.566666667 6.95 0.044486314 1.861313869 1.223021583 -7 -6 -6.5 0.01 dme-miR-317-3p 6mer2-7 GTGTTC 2R 1343931 1343936 - 2R_1343931_1343936_- 1 1 1 0 Yeti FBtr0344755 1343401 1344290 2R - 1343911 1343959 3'utr Yeti FlyBase G19234.1 AAAAGACGACGCCACCGATAATAGTGTTCGTTTTGTGATTAGATTTGCT 17 1343938 0.989078419 6 17 163 1 1.255272505 0.111111111 0.058823529 0.111111111 17 0 0 18 2R:1343911-1343959 6 Yeti FBtr0344755 1343401 1344290 GTGTTC 6mer2-7 dme-miR-317-3p 2R - 1343925 1343958 3'utr Yeti FlyBase G14622.1 AAAGACGACGCCACCGATAATAGTGTTCGTTTTG 10 1343938 0.982753503 2 9 70 0.952380952 1.301029996 0.238095238 0.6 0.80952381 10 1 0 20 2R:1343925-1343958 6 13.5 1299 FBgn0267398 2383.886667 322.18 496.1 0.005663021 0.041902042 0.027212256 2 2 2 0.01 dme-miR-12-5p 6mer2-7 ATACTC 2R 13439629 13439634 - 2R_13439629_13439634_- 1 1 1 0 cnn FBtr0309891|FBtr0309889|FBtr0100656|FBtr0309893|FBtr0309892|FBtr0087703|FBtr0100654|FBtr0087704 13439312|13439312|13439312|13439312|13439312|13439312|13439312|13439312 13440071|13440071|13440071|13440071|13440071|13440071|13440071|13440071 2R - 13439509 13439666 3'utr cnn FlyBase G22830.1 TAGTACCATAACTTTAACGAATATTCTCTAGCATACTCGACCTGATTCTTGTCTCGCATAACCCTCCATTTTCCAATCATTTGCGTGTAGTGACTGCCTGATTAATGTATTCTCCTGCTGCTTAACTGCTCTTAATCCTTGATTTCAGTTAACCATCG 40 13439621 0.985117143 14 38 308 0.93877551 1.662757832 0.102040816 0.15 0.306122449 40 3 0 46 2R:13439509-13439666 6 cnn FBtr0100654|FBtr0087704|FBtr0309892|FBtr0087703|FBtr0100656|FBtr0309893|FBtr0309891|FBtr0309889 13439312|13439312|13439312|13439312|13439312|13439312|13439312|13439312 13440071|13440071|13440071|13440071|13440071|13440071|13440071|13440071 ATACTC 6mer2-7 dme-miR-12-5p 2R - 13439593 13439644 3'utr cnn FlyBase G17319.1 ATTCTCTAGCATACTCGACCTGATTCTTGTCTCGCATAACCCTCCATTTTCC 28 13439621 0.690313583 6 26 211 0.945945946 1.544068044 0 0.25 0.432432432 28 2 0 35 2R:13439593-13439644 6 22.5 1300 FBgn0013765 2282.81 64.11 98.51 0.009856274 0.350959289 0.228403208 -13 -13 -13 0.01 dme-miR-14-3p 7mer-m8 AAGACTG 2R 13439843 13439849 - 2R_13439843_13439849_- 0.671795832 0.671795832 0.671795832 0 cnn FBtr0309891|FBtr0309889|FBtr0100656|FBtr0309893|FBtr0309892|FBtr0087703|FBtr0100654|FBtr0087704 13439312|13439312|13439312|13439312|13439312|13439312|13439312|13439312 13440071|13440071|13440071|13440071|13440071|13440071|13440071|13440071 2R - 13439815 13439867 3'utr cnn FlyBase G22833.1 ATACCCATGCATTTTCTAAAGACTGTTGAGGGAATCGAACCCATTGAATGAAC 72 13439842 0.769312979 8 69 532 0.9625 1.886490725 0.0375 0.111111111 0.2 72 3 0 77 2R:13439815-13439867 7 cnn FBtr0100654|FBtr0087704|FBtr0309892|FBtr0087703|FBtr0100656|FBtr0309893|FBtr0309891|FBtr0309889 13439312|13439312|13439312|13439312|13439312|13439312|13439312|13439312 13440071|13440071|13440071|13440071|13440071|13440071|13440071|13440071 AAGACTG 7mer-m8 dme-miR-14-3p 2R - 13439765 13439869 3'utr cnn FlyBase G17320.1 AAATACCCATGCATTTTCTAAAGACTGTTGAGGGAATCGAACCCATTGAATGAACTATCACACACACACACACACACACCTGTTTTAAGCACAAAACGAAACTAA 64 13439842 0.980833802 8 61 433 0.958333333 1.662757832 0.072916667 0.390625 0.59375 64 3 1 92 2R:13439765-13439869 7 60 1301 FBgn0013765 2282.81 64.11 98.51 0.026283396 0.935891437 0.609075221 -7 -7 -7 0.01 dme-miR-8-3p 6mer3-8 CAGTAT 2R 13440050 13440055 - 2R_13440050_13440055_- 1 1 1 0 cnn FBtr0309891|FBtr0309889|FBtr0100656|FBtr0309893|FBtr0309892|FBtr0087703|FBtr0100654|FBtr0087704 13439312|13439312|13439312|13439312|13439312|13439312|13439312|13439312 13440071|13440071|13440071|13440071|13440071|13440071|13440071|13440071 2R - 13439982 13440129 stop_codon cnn FlyBase G22834.1 ACTAAAAACGCACAATGTGCTGCGAAACGTTCGCTCAAACATGGAGAATGAGTTATAACGATCGCGCCGACGTCCAGTATATCAGCATTAACCCGAGAGGCCATTCACCCAATGTTCAATTGCCATTTCTTGCCATTCTTATATTTTG 65 13440048 0.973510686 14 62 382 0.948051948 1.86332286 0.155844156 0.153846154 0.285714286 65 4 0 73 2R:13439982-13440129 6 cnn FBtr0100654|FBtr0087704|FBtr0309892|FBtr0087703|FBtr0100656|FBtr0309893|FBtr0309891|FBtr0309889 13439312|13439312|13439312|13439312|13439312|13439312|13439312|13439312 13440071|13440071|13440071|13440071|13440071|13440071|13440071|13440071 CAGTAT 6mer3-8 dme-miR-8-3p 2R - 13439966 13440084 stop_codon cnn FlyBase G17321.1 GAATGAGTTATAACGATCGCGCCGACGTCCAGTATATCAGCATTAACCCGAGAGGCCATTCACCCAATGTTCAATTGCCATTTCTTGCCATTCTTATATTTTGTATGCATTGTATTTTG 39 13440048 0.97690422 9 38 254 0.981818182 1.73239376 0.236363636 0.384615385 0.563636364 39 1 0 54 2R:13439966-13440084 6 35.5 1302 FBgn0013765 2282.81 64.11 98.51 0.01555101 0.553735767 0.360369506 -7 -7 -7 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2R 13453363 13453369 + 2R_13453363_13453369_+ 0.521193334 0.52122367 0.521208502 2.15E-05 cbs FBtr0087666|FBtr0309886|FBtr0309887 13453210|13453210|13453210 13453393|13453393|13453393 2R + 13453345 13453384 3'utr cbs FlyBase G15585.2 AGTATTTATTTCTACCGTTGTGATTTTTATAATAAACTAA 53 13453369 0.62152229 7 49 599 0.958333333 1.361727836 0 0.283018868 0.472222222 53 1 2 69 2R:13453345-13453384 7 cbs FBtr0309886|FBtr0309887|FBtr0087666 13453210|13453210|13453210 13453393|13453393|13453393 TGTGATT 7mer-m1 dme-miR-308-3p 2R + 13453345 13453385 3'utr cbs FlyBase G11826.1 AGTATTTATTTCTACCGTTGTGATTTTTATAATAAACTAAC 39 13453370 0.666561879 6 36 461 0.905660377 1.204119983 0 0.307692308 0.490566038 39 3 2 48 2R:13453345-13453385 7 45.5 1303 FBgn0086757 496.6633333 26.83333333 41.18333333 0.091611353 1.695652174 1.104815864 -6 -7 -6.5 0.01 dme-miR-14-3p 6mer2-7 AGACTG 2R 13454139 13454144 - 2R_13454139_13454144_- 1 1 1 0 arr FBtr0087702 13453638 13454435 2R - 13454039 13454302 3'utr arr FlyBase G22846.1 GAGTTTAATTGGTCATTTAAGGCTTTAACTAATTTTAATCATAGCTTAGAGAGAGCGTCCATGCCTGAAGGACTTATTCGATCTCGTTAAGTTTCATTTTGCCAGATAGCCCGAAATAGATTGCAGTACAATGCTTTGCAGCTACCATACGCAACAATAGACTGCAGATTATTAGCAATTACCTTAGGTATAAATGATGTAATATTCGATAGGTGAGACAGTCTTTTGAAATTCCGTGTGCCAAATTTTCCGAAACCTGACAGA 285 13454145 0.971995387 36 268 1709 0.9375 1.896250562 0.113095238 0.150877193 0.279761905 285 18 3 315 2R:13454039-13454302 6 arr FBtr0087702 13453638 13454435 AGACTG 6mer2-7 dme-miR-14-3p 2R - 13454118 13454316 3'utr arr FlyBase G17330.1 GTAAATATGTATGTGAGTTTAATTGGTCATTTAAGGCTTTAACTAATTTTAATCATAGCTTAGAGAGAGCGTCCATGCCTGAAGGACTTATTCGATCTCGTTAAGTTTCATTTTGCCAGATAGCCCGAAATAGATTGCAGTACAATGCTTTGCAGCTACCATACGCAACAATAGACTGCAGATTATTAGCAATTACCTT 178 13454145 0.973304798 24 166 1008 0.95 1.693726949 0.153846154 0.342696629 0.55 178 9 4 247 2R:13454118-13454316 6 79 1304 FBgn0000119 295 5.866666667 8.943333333 0.26779661 13.46590909 8.833395453 1 1 1 0.01 dme-miR-12-5p 6mer2-7 ATACTC 2R 13487501 13487506 - 2R_13487501_13487506_- 1 1 1 0 bbc FBtr0087700|FBtr0332928|FBtr0305993|FBtr0087699 13487180|13487180|13486632|13486632 13487567|13487567|13487567|13487567 2R - 13487408 13487539 3'utr bbc FlyBase G22864.1 AATTTTACAAATTTACGTCGTTAGAACCGAGGGATACTCGTAGAAGCAGGCGAAGTGGGAGCGCAATTAATACAAACCAAACCCAACAAAATTCACCGTCGATGTTTTGGCTAAATAAACATAACCAAAACC 31 13487505 0.96222896 13 28 139 0.916666667 1.51851394 0.138888889 0.161290323 0.277777778 31 3 0 33 2R:13487408-13487539 6 bbc FBtr0305993|FBtr0087699|FBtr0087700|FBtr0332928 13486632|13486632|13487180|13487180 13487567|13487567|13487567|13487567 ATACTC 6mer2-7 dme-miR-12-5p 2R - 13487487 13487584 stop_codon bbc FlyBase G17342.1 AGAGCAAACCGCACTAGGCTCCGGTTATGCGCTACATTAATTAGTAATTTTACAAATTTACGTCGTTAGAACCGAGGGATACTCGTAGAAGCAGGCGA 23 13487521 0.955617325 10 22 110 0.973684211 1.568201724 0.131578947 0.434782609 0.657894737 23 1 0 37 2R:13487487-13487584 6 16 1305 FBgn0033844 1978.716667 102.1933333 155.1166667 0.008086049 0.156565986 0.103148168 -1 15 7 0.01 dme-miR-283-5p 7mer-A1 GATATTA 2R 13495322 13495328 - 2R_13495322_13495328_- 0.782911824 0.782911824 0.782911824 0 drk FBtr0087696|FBtr0087697|FBtr0087698 13495220|13495220|13495220 13496977|13496977|13496977 2R - 13495316 13495355 3'utr drk FlyBase G22881.1 AATAAAGCAGGCAATTGACAAGGTTTAGATATTAACTAAC 38 13495331 0.937114394 3 38 233 1 1.662757832 0.130434783 0.131578947 0.282608696 38 0 0 46 2R:13495316-13495355 7 drk FBtr0087698|FBtr0087696|FBtr0087697 13495220|13495220|13495220 13496977|13496977|13496977 GATATTA 7mer-A1 dme-miR-283-5p 2R - 13495316 13495352 3'utr drk FlyBase G17359.1 AAAGCAGGCAATTGACAAGGTTTAGATATTAACTAAC 31 13495331 0.703441228 2 31 151 1 1.633468456 0.069767442 0.35483871 0.534883721 31 0 0 43 2R:13495316-13495352 7 34.5 1306 FBgn0004638 2373.316667 149.8733333 229.7333333 0.014536619 0.230194386 0.150174115 3 3 3 0.01 dme-miR-980-3p 6mer3-8 GGCAGC 2R 13496891 13496896 - 2R_13496891_13496896_- 1 1 1 0 drk FBtr0087695|FBtr0087696|FBtr0087697|FBtr0087694|FBtr0087698 13496439|13495220|13495220|13496764|13495220 13496977|13496977|13496977|13496977|13496977 2R - 13496866 13496923 3'utr drk FlyBase G22889.1 AAACACAACACACACCCATAACGATTAGGCAGCATTATCAGCAATTGCGAATAACAAC 40 13496898 0.946402215 7 38 166 0.955555556 1.633468456 0.022222222 0.1 0.2 40 2 0 43 2R:13496866-13496923 6 drk FBtr0087694|FBtr0087698|FBtr0087696|FBtr0087697|FBtr0087695 13496764|13495220|13495220|13495220|13496439 13496977|13496977|13496977|13496977|13496977 GGCAGC 6mer3-8 dme-miR-980-3p 2R - 13496868 13496919 3'utr drk FlyBase G17366.1 ACAACACACACCCATAACGATTAGGCAGCATTATCAGCAATTGCGAATAACA 27 13496898 0.941129823 6 27 127 1 1.662757832 0.065217391 0.555555556 0.739130435 27 0 0 46 2R:13496868-13496919 6 29.5 1307 FBgn0004638 2373.316667 149.8733333 229.7333333 0.012429863 0.196832881 0.12840975 2 2 2 0.01 dme-miR-965-3p 8mer-A1 TACGCTTA 2R 13537507 13537514 - 2R_13537507_13537514_- 0.625364919 0.625364919 0.625364919 0 CG6145 FBtr0087685|FBtr0087687|FBtr0300193|FBtr0300192|FBtr0087686 13537369|13537369|13537369|13537369|13537369 13537761|13537761|13537761|13537761|13537761 2R - 13537496 13537582 3'utr CG6145 FlyBase G22897.1 GATCGCAATGTTTGCTTAAGCTAGACCTATTCTGTTGATTCTTGTGAACAAAAAAAAAAATTACAGCTTACGCTTAGCTCTTAAGTT 20 13537544 0.986945006 7 18 164 0.958333333 1.06069784 0.125 0.2 0.333333333 20 0 1 23 2R:13537496-13537582 8 CG6145 FBtr0087686|FBtr0300193|FBtr0300192|FBtr0087685|FBtr0087687 13537369|13537369|13537369|13537369|13537369 13537761|13537761|13537761|13537761|13537761 TACGCTTA 8mer-A1 dme-miR-965-3p 2R - 13537500 13537590 3'utr CG6145 FlyBase G17374.1 TTGATTCCGATCGCAATGTTTGCTTAAGCTAGACCTATTCTGTTGATTCTTGTGAACAAAAAAAAAAATTACAGCTTACGCTTAGCTCTTA 12 13537515 0.986556343 5 11 100 1 1.361727836 0 0.5 0.739130435 12 0 0 23 2R:13537500-13537590 8 5.5 1308 FBgn0033853 288.29 16.11333333 24.75 0.019078012 0.34133223 0.222222222 30 1 15.5 0.01 dme-miR-92b-3p 8mer-m1 GTGCAATT 2R 13537672 13537679 - 2R_13537672_13537679_- 0.596698356 0.596698356 0.596698356 0 CG6145 FBtr0087685|FBtr0087687|FBtr0300193|FBtr0300192|FBtr0087686 13537369|13537369|13537369|13537369|13537369 13537761|13537761|13537761|13537761|13537761 2R - 13537649 13537815 stop_codon CG6145 FlyBase G22898.1 GGGTCGGAGGACACGCTCGATGACTTTGACAATCTTCAGATCTACGATGCGTAATGGCAGCCAAACCCAATCACTGTTTGTTAGCGTGGCCAATTAGACTAGTTGTAGTCGTAGTTTTTAGGGCTTGTGTGCTAGTGTGCAATTTGGTAGGCTTAATTATGTAGGAA 29 13537680 0.993499608 12 29 190 1 1.602059991 0.4 0.379310345 0.55 29 0 0 40 2R:13537649-13537815 8 CG6145 FBtr0087686|FBtr0300193|FBtr0300192|FBtr0087685|FBtr0087687 13537369|13537369|13537369|13537369|13537369 13537761|13537761|13537761|13537761|13537761 GTGCAATT 8mer-m1 dme-miR-92b-3p 2R - 13537658 13537723 3'utr CG6145 FlyBase G17375.1 ATTAGACTAGTTGTAGTCGTAGTTTTTAGGGCTTGTGTGCTAGTGTGCAATTTGGTAGGCTTAATT 9 13537689 0.981214508 6 9 74 1 1.113943352 0.230769231 0.444444444 0.615384615 9 0 0 13 2R:13537658-13537723 8 8.5 1309 FBgn0033853 288.29 16.11333333 24.75 0.0294842 0.527513446 0.343434343 1 10 5.5 0.01 dme-miR-92b-3p 7mer-m1 TGCAATT 2R 13555379 13555385 + 2R_13555379_13555385_+ 0.765586663 0.765586663 0.765586663 0 Roe1 FBtr0087675 13555286 13555606 2R + 13555349 13555386 3'utr Roe1 FlyBase G15631.1 AATTTACATGGCGTGTGTCTCTCAATTGTTTGCAATTT 7 13555374 0.971119146 3 6 60 0.857142857 0.77815125 0.428571429 0 0 7 1 0 6 2R:13555349-13555386 7 Roe1 FBtr0087675 13555286 13555606 TGCAATT 7mer-m1 dme-miR-92b-3p 2R + 13555361 13555414 3'utr Roe1 FlyBase G11857.1 GTGTGTCTCTCAATTGTTTGCAATTTGTTTTCCGCTGCAAAATTCATGTACGTA 5 13555386 0.963627659 3 4 38 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2R:13555361-13555414 7 2 1310 FBgn0014877 286 33.49333333 51.28666667 0.006993007 0.059713376 0.03899649 5 -7 -1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 13555501 13555506 + 2R_13555501_13555506_+ 1 1 1 0 Roe1 FBtr0087675|FBtr0087675|FBtr0087675 13555286|13555286|13555286 13555606|13555606|13555606 2R + 13555473 13555526 3'utr Roe1 FlyBase G15633.1 TTAGAATTCCTCCTAGTTTCTAAGAGATCTGTGACTGGATTTGATGGCCACAAT 370 13555502 0.792228521 11 348 3113 0.950236967 1.700054386 0.05450237 0.127027027 0.234597156 370 14 7 401 2R:13555473-13555526 6 Roe1 FBtr0087675|FBtr0087675|FBtr0087675 13555286|13555286|13555286 13555606|13555606|13555606 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 13555441 13555573 3'utr Roe1 FlyBase G11858.1 ACAAACGCATCCTTCGGGCAAAGCTTGCGAATTTAGAATTCCTCCTAGTTTCTAAGAGATCTGTGACTGGATTTGATGGCCACAATTTGTACCATACGCGTGGCCATCGAGTGTTCCACTTTAAGGTTTAATT 228 13555502 0.804102875 19 214 1796 0.943786982 2.202760687 0.062130178 0.355263158 0.565088757 228 18 1 319 2R:13555441-13555573 6 285.5 1311 FBgn0014877 286 33.49333333 51.28666667 0.998251748 8.524084395 5.566748993 -1 -1 -1 0.01 dme-miR-317-5p 7mer-A1 TATCCCA 2R 13580425 13580431 - 2R_13580425_13580431_- 0.823349562 0.823349562 0.823349562 0 CG6191 FBtr0330617 13580311 13580990 2R - 13580388 13580433 3'utr CG6191 FlyBase G22913.1 TATATCCCAAAATTACCTTCGTCCCTGATTCCTAGACTCCTAAGTG 23 13580408 0.666205762 6 23 187 1 1.414973348 0 0.130434783 0.230769231 23 0 0 26 2R:13580388-13580433 7 CG6191 FBtr0330617 13580311 13580990 TATCCCA 7mer-A1 dme-miR-317-5p 2R - 13580388 13580436 3'utr CG6191 FlyBase G17389.1 GAGTATATCCCAAAATTACCTTCGTCCCTGATTCCTAGACTCCTAAGTG 14 13580408 0.668228211 4 13 115 0.904761905 1.278753601 0.047619048 0.357142857 0.571428571 14 2 0 19 2R:13580388-13580436 7 10.5 1312 FBgn0027581 566.66 18.94333333 29.07333333 0.01852963 0.554284709 0.361155698 -23 -23 -23 0.01 dme-miR-252-5p 7mer-m8 GTACTTA 2R 13580891 13580897 - 2R_13580891_13580897_- 0.588299917 0.588299917 0.588299917 0 CG6191 FBtr0330617|FBtr0087678 13580311|13580584 13580990|13580990 2R - 13580885 13580924 stop_codon CG6191 FlyBase G22914.2 CGCAAGGGCAGTCGCAAGTAGGCGTTCGTACTTATAGCAT 34 13580900 0.775550217 7 24 205 0.789473684 1.176091259 0.210526316 0.117647059 0.210526316 34 7 1 30 2R:13580885-13580924 7 CG6191 FBtr0330617|FBtr0087678 13580311|13580584 13580990|13580990 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 13580868 13580922 stop_codon CG6191 FlyBase G17390.1 CAAGGGCAGTCGCAAGTAGGCGTTCGTACTTATAGCATACTTTCGGGTGTTGGGT 13 13580900 0.985075084 3 11 91 0.8 1.204119983 0 0.461538462 0.65 13 4 0 16 2R:13580868-13580922 7 22.5 1313 FBgn0027581 566.66 18.94333333 29.07333333 0.039706349 1.187752947 0.773905068 3 3 3 0.01 dme-miR-995-5p 6mer3-8 AATTCG 2R 13819932 13819937 - 2R_13819932_13819937_- 1 0.57842338 0.78921169 0.298099673 fl(2)d FBtr0304697|FBtr0304696|FBtr0087647|FBtr0087648 13819622|13819622|13819622|13819622 13820154|13820154|13820154|13820154 2R - 13819924 13819968 3'utr fl(2)d FlyBase G22924.1 TATTTCGTTTGCATGCGGCGTAGACATACATAATTCGCAAATTAT 7 13819960 0.947550023 5 7 49 1 0.84509804 0.142857143 0 0 7 0 0 7 2R:13819924-13819968 6 fl(2)d FBtr0087647|FBtr0087648|FBtr0304697|FBtr0304696 13819622|13819622|13819622|13819622 13820154|13820154|13820154|13820154 AATTCG 6mer3-8 dme-miR-995-5p 2R - 13819868 13819985 3'utr fl(2)d FlyBase G17395.1 TTGTAAAATACGTTTATTATTTCGTTTGCATGCGGCGTAGACATACATAATTCGCAAATTATTTAGAAGTCACTGCTTTACATACGAAATGCATTATGTAGAACAGTGTAAAACTTCA 13 13819959 0.986710793 11 13 93 1 1.255272505 0 0.307692308 0.5 13 0 0 18 2R:13819868-13819985 6 3 1314 FBgn0000662 1153.03 55.06666667 84.32666667 0.00260184 0.054479419 0.035575935 23 22 22.5 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 2R 13825535 13825541 + 2R_13825535_13825541_+ 0.782911824 0.782911824 0.782911824 0 CG13339 FBtr0087632 13825430 13825572 2R + 13825511 13825549 3'utr CG13339 FlyBase G15651.1 TAAATATCTAATATTAGGGCTGTTGTACAAATATGTAAA 13 13825533 0.695330293 6 13 100 1 1.146128036 0.5 0.076923077 0.142857143 13 0 0 14 2R:13825511-13825549 7 CG13339 FBtr0087632 13825430 13825572 GTACAAA 7mer-A1 dme-miR-305-5p 2R + 13825516 13825550 3'utr CG13339 FlyBase G11870.1 ATCTAATATTAGGGCTGTTGTACAAATATGTAAAT 15 13825533 0.622546621 6 15 98 1 1.462397998 0.724137931 0.6 0.793103448 15 0 0 29 2R:13825516-13825550 7 14 1315 FBgn0033871 109.33 21.32666667 32.49 0.128052685 0.656455142 0.430901816 2 2 2 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 13863458 13863463 + 2R_13863458_13863463_+ 1 0.999999985 0.999999992 0 CG13344 FBtr0087586|FBtr0087586|FBtr0087586|FBtr0339953|FBtr0339953|FBtr0339953 13863344|13863344|13863344|13863344|13863344|13863344 13864156|13864156|13864156|13863579|13863579|13863579 2R + 13863433 13863491 3'utr CG13344 FlyBase G15662.1 AGGTTTAGTTTTATGAGGCGCACTTCTGTGACTTTGTTTGTGTTCGTACGTTCGTATAT 54 13863467 0.814667431 10 53 463 0.984375 1.799340549 0.3125 0.166666667 0.296875 54 1 0 63 2R:13863433-13863491 6 CG13344 FBtr0339953|FBtr0339953|FBtr0339953|FBtr0087586|FBtr0087586|FBtr0087586 13863344|13863344|13863344|13863344|13863344|13863344 13863579|13863579|13863579|13864156|13864156|13864156 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 13863439 13863489 3'utr CG13344 FlyBase G11878.1 AGTTTTATGAGGCGCACTTCTGTGACTTTGTTTGTGTTCGTACGTTCGTAT 37 13863467 0.615195605 9 33 319 0.886792453 1.194976603 0.339622642 0.378378378 0.566037736 37 4 2 47 2R:13863439-13863489 6 39.5 1316 FBgn0033884 128.6733333 8.203333333 12.55333333 0.306978913 4.815115807 3.146574615 -9 -9 -9 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2R 13863610 13863615 + 2R_13863610_13863615_+ 1 1 1 0 CG13344 FBtr0087586 13863344 13864156 2R + 13863574 13863650 3'utr CG13344 FlyBase G15663.1 TACCTTAACTATAATGATATTTATAATAATTTACAAAAGACTTGCGGCATCATGCCAAGCCGATATTATTAGGGCCT 13 13863604 0.974646381 7 11 79 0.875 1.146128036 0 0.230769231 0.375 13 2 0 14 2R:13863574-13863650 6 CG13344 FBtr0087586 13863344 13864156 AAGACT 6mer3-8 dme-miR-14-3p 2R + 13863508 13863630 3'utr CG13344 FlyBase G11879.1 ATGTTTAGTTAGCTTTAGCGAGCCGTGTTAGCTAATTTGGACTATATTAATGATGATATTTAGTTGTACCTTAACTATAATGATATTTATAATAATTTACAAAAGACTTGCGGCATCATGCCA 39 13863603 0.982498635 13 35 270 0.935483871 1.763427994 0.032258065 0.435897436 0.64516129 39 4 0 58 2R:13863508-13863630 6 14.5 1317 FBgn0033884 128.6733333 8.203333333 12.55333333 0.112688462 1.767574157 1.155071694 6 7 6.5 0.01 dme-miR-980-3p 6mer3-8 GGCAGC 2R 13863699 13863704 + 2R_13863699_13863704_+ 1 1 1 0 CG13344 FBtr0087586 13863344 13864156 2R + 13863682 13863716 3'utr CG13344 FlyBase G15664.1 ATTTAGGAGCACCAACTGGCAGCGCTGGCGTTGAC 10 13863698 0.947115154 2 10 21 1 1.041392685 0.363636364 0.1 0.181818182 10 0 0 11 2R:13863682-13863716 6 CG13344 FBtr0087586 13863344 13864156 GGCAGC 6mer3-8 dme-miR-980-3p 2R + 13863667 13863716 3'utr CG13344 FlyBase G11880.1 AGAGCAGCAGCATGTATTTAGGAGCACCAACTGGCAGCGCTGGCGTTGAC 7 13863698 0.999181601 2 6 22 1 1.041392685 0.363636364 0.571428571 0.727272727 7 0 0 11 2R:13863667-13863716 6 8 1318 FBgn0033884 128.6733333 8.203333333 12.55333333 0.062172944 0.975213328 0.637280935 1 1 1 0.01 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2R 13863903 13863910 + 2R_13863903_13863910_+ 0.63113665 0.63113665 0.63113665 0 CG13344 FBtr0087586 13863344 13864156 2R + 13863815 13863940 3'utr CG13344 FlyBase G15665.1 AACCCCCTCTGGCAGCCCATAGCACAAAGAAACGTATGAACCCAGCTTGTACTTGAGTTAGTTGGATGATTAAAGTTGAAGCGGCATTTCTAGTCAGTAAATGGTGGTCAGAATAGAGGGAACGTA 137 13863902 0.977503484 11 134 886 0.9625 2.187520721 0.0875 0.145985401 0.26875 137 6 0 154 2R:13863815-13863940 8 CG13344 FBtr0087586 13863344 13864156 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R + 13863886 13863980 3'utr CG13344 FlyBase G11881.1 AAAGTTGAAGCGGCATTTCTAGTCAGTAAATGGTGGTCAGAATAGAGGGAACGTAGAAGGAGGAGGAGGAGGAGGAGTAACCCCGATACAGGGCA 70 13863902 0.972006182 8 66 393 0.97 1.685741739 0.2 0.371428571 0.56 70 2 1 97 2R:13863886-13863980 8 97 1319 FBgn0033884 128.6733333 8.203333333 12.55333333 0.753846951 11.8244616 7.727031333 1 1 1 0.01 dme-bantam-3p 6mer3-8 TGATCT 2R 13943680 13943685 - 2R_13943680_13943685_- 1 1 1 0 AGO1 FBtr0305592 13943385 13947971 2R - 13943618 13943697 3'utr AGO1 FlyBase G23018.1 AATGAAAGTTGATGATCTTTTCGATATAATTCTGTCAAGCTGTCTTAACAATTAGTTATAAGCGCTTCAATACAAGAAAC 20 13943678 0.855237785 8 20 165 1 1.414973348 0.115384615 0.15 0.346153846 20 0 0 26 2R:13943618-13943697 6 AGO1 FBtr0305592 13943385 13947971 TGATCT 6mer3-8 dme-bantam-3p 2R - 13943619 13943727 3'utr AGO1 FlyBase G17447.1 CAAAATGCGAGTTTGTGAAATATGCAATTTAATGAAAGTTGATGATCTTTTCGATATAATTCTGTCAAGCTGTCTTAACAATTAGTTATAAGCGCTTCAATACAAGAAA 16 13943679 0.985238221 7 14 124 0.923076923 1.380211242 0.192307692 0.3125 0.576923077 16 2 0 24 2R:13943619-13943727 6 10.5 1320 FBgn0262739 6339.806667 111.4333333 171.8633333 0.001656202 0.094226742 0.061095056 -7 -6 -6.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 2R 13943883 13943888 - 2R_13943883_13943888_- 1 1 1 0 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 2R - 13943866 13943930 3'utr AGO1 FlyBase G23020.1 AAGCAACGTGAGCAACGTAATATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGT 37 13943890 0.86445956 12 34 389 0.886363636 1.591064607 0.159090909 0.162162162 0.295454545 37 5 0 39 2R:13943866-13943930 6 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 TGATCT 6mer3-8 dme-bantam-3p 2R - 13943864 13943921 3'utr AGO1 FlyBase G17448.1 GAGCAACGTAATATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTAA 27 13943890 0.987717694 10 26 285 0.975 1.591064607 0.25 0.296296296 0.525 27 1 0 39 2R:13943864-13943921 6 29 1321 FBgn0262739 6339.806667 111.4333333 171.8633333 0.004574272 0.260245289 0.168738727 2 2 2 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 13944051 13944056 - 2R_13944051_13944056_- 1 1 1 0 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 2R - 13944021 13944109 3'utr AGO1 FlyBase G23021.1 TCGTGCGTTAAGATTAGGGAGATCATCTGGTACATACCTTACTTTAAAAATCAACCAAAATGCCGGGTAATTAATCAATAAAATACATA 998 13944049 0.978693913 13 988 4028 0.993605116 2.793441133 0.007194245 0.182364729 0.347721823 998 7 1 1243 2R:13944021-13944109 6 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 13944025 13944104 3'utr AGO1 FlyBase G17449.1 CGTTAAGATTAGGGAGATCATCTGGTACATACCTTACTTTAAAAATCAACCAAAATGCCGGGTAATTAATCAATAAAATA 609 13944049 0.968658885 12 597 2386 0.977324263 2.458386011 0.003401361 0.318555008 0.529478458 609 18 2 862 2R:13944025-13944104 6 776 1322 FBgn0262739 6339.806667 111.4333333 171.8633333 0.122401209 6.963804966 4.515215578 -7 -7 -7 0.01 dme-miR-995-5p 6mer3-8 AATTCG 2R 13944142 13944147 - 2R_13944142_13944147_- 0.999999929 0.999999951 0.99999994 7.07E-08 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 2R - 13944136 13944170 3'utr AGO1 FlyBase G23022.1 CGGATAACGAACCCCTTAGCTGAAATTCGACTAGC 5 13944155 0.958230762 2 4 19 0.714285714 0.698970004 0.285714286 0.4 0.571428571 5 2 0 5 2R:13944136-13944170 6 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 AATTCG 6mer3-8 dme-miR-995-5p 2R - 13944122 13944213 3'utr AGO1 FlyBase G17450.1 ATCCACACTCGACTTAGTGTTCCAAATGCGCATCGGATCAGATCGGATAACGAACCCCTTAGCTGAAATTCGACTAGCAAAATCAATACGTT 9 13944155 0.91735742 5 9 36 1 1.079181246 0 0.333333333 0.5 9 0 0 12 2R:13944122-13944213 6 2.5 1323 FBgn0262739 6339.806667 111.4333333 171.8633333 0.000394334 0.022434939 0.014546442 8 8 8 0.01 dme-miR-305-3p 8mer-m1 ATGTGCCG 2R 13944588 13944595 - 2R_13944588_13944595_- 0.628736567 0.628736567 0.628736567 0 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 2R - 13944563 13944608 3'utr AGO1 FlyBase G23026.1 ATATTACTTATAAATGTGCCGTTTATAGATGTCTACAATTATATAC 17 13944593 0.738681045 6 16 164 1 1.255272505 0 0.058823529 0.111111111 17 0 0 18 2R:13944563-13944608 8 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 ATGTGCCG 8mer-m1 dme-miR-305-3p 2R - 13944560 13944605 3'utr AGO1 FlyBase G17453.1 TTACTTATAAATGTGCCGTTTATAGATGTCTACAATTATATACAAC 6 13944584 0.982702537 4 6 52 1 1 0.3 0.5 0.7 6 0 0 10 2R:13944560-13944605 8 9.5 1324 FBgn0262739 6339.806667 111.4333333 171.8633333 0.001498468 0.085252767 0.055276479 -2 -11 -6.5 0.01 dme-miR-1007-3p 7mer-m8 TGAGCTT 2R 13944735 13944741 - 2R_13944735_13944741_- 0.477843764 0.473320592 0.475582178 0.003198385 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 2R - 13944714 13944832 3'utr AGO1 FlyBase G23027.1 TATGTTCTGCTCAGAGGCAAGGCCCAAATAAAAAGACAAAAAGCCGGGATATCCAAATGGGAACTTACATTTTTATCTGTCAAAATTCAATTGAGCTTTAAACTAAAGATAGATCGAGA 158 13944741 0.976271152 12 150 963 0.945054945 2.235528447 0.027472527 0.120253165 0.236263736 158 10 0 172 2R:13944714-13944832 7 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 TGAGCTT 7mer-m8 dme-miR-1007-3p 2R - 13944708 13944758 3'utr AGO1 FlyBase G17454.1 ATCTGTCAAAATTCAATTGAGCTTTAAACTAAAGATAGATCGAGAAAAAAC 52 13944741 0.805553155 3 49 371 0.927536232 1.806179974 0 0.288461538 0.463768116 52 5 0 64 2R:13944708-13944758 7 79.5 1325 FBgn0262739 6339.806667 111.4333333 171.8633333 0.012539815 0.71343105 0.462576854 0 0 0 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 2R 13945044 13945049 - 2R_13945044_13945049_- 1 1 1 0 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 2R - 13945004 13945127 3'utr AGO1 FlyBase G23028.1 TGAAGCGGAAATATCGGTGGGAAAACCCTTATCACTAATGAAAATGCCAATAACAAGCTGCTATCTCCTCCCATCCAAGAAAAATGGGCTGTAACAGTTGTCCCTATATACACGCGTAAAACTT 41 13945043 0.985491643 8 36 203 0.888888889 1.602059991 0.288888889 0.073170732 0.155555556 41 5 0 40 2R:13945004-13945127 6 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 GAAAAA 6mer3-8 dme-miR-980-5p 2R - 13945024 13945125 3'utr AGO1 FlyBase G17456.1 AAGCGGAAATATCGGTGGGAAAACCCTTATCACTAATGAAAATGCCAATAACAAGCTGCTATCTCCTCCCATCCAAGAAAAATGGGCTGTAACAGTTGTCCC 21 13945043 0.983608347 8 16 94 0.78125 1.096910013 0.34375 0.333333333 0.5625 21 6 1 25 2R:13945024-13945125 6 7.5 1326 FBgn0262739 6339.806667 111.4333333 171.8633333 0.001183001 0.067304816 0.043639326 -6 -6 -6 0.01 dme-miR-33-5p 6mer2-7 AATGCA 2R 13945225 13945230 - 2R_13945225_13945230_- 1 1 1 0 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 2R - 13945180 13945275 3'utr AGO1 FlyBase G23029.1 ATATTCACTTAGTTTAAGCTGAAGCTGAAATGTGTGCCGACAATGAATGCATCTCGTAGTTGTAAAATGAGCGAAATATTCAACAATAATTTACTT 414 13945228 0.983198604 15 401 3155 0.974248927 2.356025857 0.278969957 0.111111111 0.210300429 414 11 1 454 2R:13945180-13945275 6 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 AATGCA 6mer2-7 dme-miR-33-5p 2R - 13945201 13945340 3'utr AGO1 FlyBase G17457.1 AAAGGAGTTCGCGATTCGGGGCTCGATTTTTGAGATCGGCCAGAAAGAACCAACATTTACATTATATATTCACTTAGTTTAAGCTGAAGCTGAAATGTGTGCCGACAATGAATGCATCTCGTAGTTGTAAAATGAGCGAA 180 13945228 0.983135224 15 171 1306 0.954385965 2.133538908 0.242105263 0.388888889 0.614035088 180 12 1 272 2R:13945201-13945340 6 276.5 1327 FBgn0262739 6339.806667 111.4333333 171.8633333 0.043613317 2.481304218 1.608836479 -2 -2 -2 0.01 dme-miR-1003-3p 7mer-m8 ATGTGAG 2R 13946084 13946090 - 2R_13946084_13946090_- 0.671796207 0.671796207 0.671796207 0 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 2R - 13945974 13946162 3'utr AGO1 FlyBase G23034.1 CATCCTTCTTCACAGAACCTTTAATTTAGATTTAGTTTCCAAGTTTGCAAGCTGTTTTGCCAATCGTACATTATGTGAGCATTATAAAATACATAATATATATAAATCTATATGCTTATATTTAATCATTTACTGCACTTACAAATTAGTTGGTAATCCTCAAGAATATATGTATAAAGAAAAAAAGGG 88 13946090 0.940822388 37 76 698 0.900990099 1.356981401 0.108910891 0.125 0.237623762 88 7 3 91 2R:13945974-13946162 7 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 ATGTGAG 7mer-m8 dme-miR-1003-3p 2R - 13945981 13946170 3'utr AGO1 FlyBase G17459.1 ATTGTATACATCCTTCTTCACAGAACCTTTAATTTAGATTTAGTTTCCAAGTTTGCAAGCTGTTTTGCCAATCGTACATTATGTGAGCATTATAAAATACATAATATATATAAATCTATATGCTTATATTTAATCATTTACTGCACTTACAAATTAGTTGGTAATCCTCAAGAATATATGTATAAAGAAA 62 13946106 0.984202686 24 56 504 0.904255319 1.452297671 0.042553191 0.338709677 0.563829787 62 7 2 85 2R:13945981-13946170 7 19 1328 FBgn0262739 6339.806667 111.4333333 171.8633333 0.002996937 0.170505534 0.110552959 0 16 8 0.01 dme-miR-999-3p 8mer-A1 AGTTAACA 2R 13946251 13946258 - 2R_13946251_13946258_- 0.643926235 0.643926235 0.643926235 0 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 2R - 13946182 13946304 3'utr AGO1 FlyBase G23034.2 ATGAAACGTATGCTTAGTAATTGTACTATATCGAGGACACAGTTCAAGTTAACATTATAATGAGTTGTTATTTATGCGGCGCGGGCGACGACGTTCTATCCACTCGGAATCGCCCGGGCCAAA 56 13946257 0.870147467 19 48 301 0.919354839 1.755874856 0.290322581 0.071428571 0.161290323 56 5 0 57 2R:13946182-13946304 8 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 AGTTAACA 8mer-A1 dme-miR-999-3p 2R - 13946214 13946293 3'utr AGO1 FlyBase G17460.1 GCTTAGTAATTGTACTATATCGAGGACACAGTTCAAGTTAACATTATAATGAGTTGTTATTTATGCGGCGCGGGCGACGA 39 13946255 0.98507182 11 29 236 0.745454545 0.913813852 0.418181818 0.358974359 0.545454545 39 10 4 41 2R:13946214-13946293 8 26 1329 FBgn0262739 6339.806667 111.4333333 171.8633333 0.004101071 0.233323362 0.151282996 -1 -3 -2 0.01 dme-miR-283-5p 8mer-m1 TGATATTT 2R 13946734 13946741 - 2R_13946734_13946741_- 0.55559384 0.55559384 0.55559384 0 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 2R - 13946560 13946840 3'utr AGO1 FlyBase G23036.1 GAAACGATAACCAAGCGGATGGAGCTGTTGTAACAATGTAGATTACTTAAATTCAAAAGTGCAAATAACACGGTAGCAGACACGTTACGTTGGCAGTGCTGATATTTTATGTTAGTCCTTAGTTTACCCTCTTTTATGCACCACACCACCACACAATCAGACTCCGAACTTCTTCAACCCTCCTCGAGTCCAAGGCATATCACTCAATGTCCTCTTATTTATGTACCTCCTACAATAAGCCTTATGATATATTTAGTTGTACCTTATATATATATATATAT 345 13946744 0.942663734 53 306 2742 0.898383372 1.744851561 0.113163972 0.208695652 0.369515012 345 38 6 389 2R:13946560-13946840 8 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 TGATATTT 8mer-m1 dme-miR-283-5p 2R - 13946724 13946835 3'utr AGO1 FlyBase G17461.3 GATAACCAAGCGGATGGAGCTGTTGTAACAATGTAGATTACTTAAATTCAAAAGTGCAAATAACACGGTAGCAGACACGTTACGTTGGCAGTGCTGATATTTTATGTTAGTC 142 13946744 0.986197784 19 113 1058 0.795454545 1.765916794 0.195454545 0.408450704 0.618181818 142 43 2 175 2R:13946724-13946835 8 144.5 1330 FBgn0262739 6339.806667 111.4333333 171.8633333 0.022792493 1.296739456 0.840784344 3 3 3 0.01 dme-miR-988-3p 8mer-A1 ACAAGGGA 2R 13946936 13946943 - 2R_13946936_13946943_- 0.612213441 0.61221408 0.612213761 4.95E-07 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 2R - 13946860 13947264 3'utr AGO1 FlyBase G23037.1 ACAGCAAACACCACATGAACACCAACCACTCGGATTCTCTGTACTGTGAACGAAGACCACCACCAAAATATAAACAAAAACCACAAGCGACATTAAAGCGACAAGCATTGAAAGAGTGTGTAGACACAACTTAGCATGTACTAATGAATTACTTCAATACTTCAACTAGGGCGCTGACAAAACCAAGCAAGAACATTTAATAGTTTGTAAGTTGGGCTCTACCAAAAACCGAACACAAAATGAGAGAGAGAGAGAGAGAGAAAAATGCAAGCAAGGCCAGATAAGTTAAGTGGGCAATGAATAACGAGAACTGCAATTTCAACAAGGGACAAACTTTTGGTCAAAACAATAGCTATACTTATAGAGCAGAGCCTAATATATACATACATAATTAGAATCTAAAAC 268 13946947 0.999995042 55 250 1217 0.938110749 1.681241237 0.182410423 0.130597015 0.241042345 268 14 5 288 2R:13946860-13947264 8 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 ACAAGGGA 8mer-A1 dme-miR-988-3p 2R - 13946845 13947073 3'utr AGO1 FlyBase G17462.1 AACATTTAATAGTTTGTAAGTTGGGCTCTACCAAAAACCGAACACAAAATGAGAGAGAGAGAGAGAGAGAAAAATGCAAGCAAGGCCAGATAAGTTAAGTGGGCAATGAATAACGAGAACTGCAATTTCAACAAGGGACAAACTTTTGGTCAAAACAATAGCTATACTTATAGAGCAGAGCCTAATATATACATACATAATTAGAATCTAAAACTAAAATTTAAAGTTT 142 13946947 0.947976752 26 132 504 0.932126697 1.614897216 0.221719457 0.401408451 0.615384615 142 11 4 206 2R:13946845-13947073 8 56 1331 FBgn0262739 6339.806667 111.4333333 171.8633333 0.008833077 0.502542626 0.325840299 4 4 4 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 2R 13958585 13958590 - 2R_13958585_13958590_- 0.999999999 1 1 0 Rpn13 FBtr0114495|FBtr0114494|FBtr0087611|FBtr0339958|FBtr0087610|FBtr0114493 13958543|13958543|13958543|13958543|13958543|13958543 13958644|13958644|13958644|13958644|13958644|13958644 2R - 13958544 13958590 3'utr Rpn13 FlyBase G23069.1 ATGTGCTGAGTGATTTTTGGATGCTAAATAAATTCAAATGGGAGTTA 21 13958573 0.981961615 5 21 178 1 1.477121255 0.666666667 0.285714286 0.5 21 0 0 30 2R:13958544-13958590 6 Rpn13 FBtr0114493|FBtr0087610|FBtr0339958|FBtr0087611|FBtr0114494|FBtr0114495 13958543|13958543|13958543|13958543|13958543|13958543 13958644|13958644|13958644|13958644|13958644|13958644 ATGTGC 6mer3-8 dme-miR-305-3p 2R - 13958545 13958593 3'utr Rpn13 FlyBase G17494.1 TTCATGTGCTGAGTGATTTTTGGATGCTAAATAAATTCAAATGGGAGTT 8 13958574 0.987915311 4 8 73 1 1.113943352 0.461538462 0.5 0.692307692 8 0 0 13 2R:13958545-13958593 6 5 1332 FBgn0033886 691.7233333 58.53 89.35333333 0.007228323 0.085426277 0.055957621 -17 -16 -16.5 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2R 13973086 13973091 - 2R_13973086_13973091_- 0.999996087 0.999999999 0.999998043 2.76E-06 CG6701 FBtr0339957|FBtr0303991|FBtr0303990|FBtr0303989 13972982|13972982|13972982|13972982 13973652|13973652|13973652|13973652 2R - 13973033 13973129 3'utr CG6701 FlyBase G23078.1 AAGTAAAAACTTGCTGACTCCTTGTGTCATCGGTTCTGAAGACTTGAAACAATTTGACAATGTAGAAAACAATATGTATATGCCCGACAAACTATTT 24 13973093 0.975000055 11 23 150 1 1.505149978 0.15625 0.291666667 0.46875 24 0 0 32 2R:13973033-13973129 6 CG6701 FBtr0303990|FBtr0303989|FBtr0339957|FBtr0303991 13972982|13972982|13972982|13972982 13973652|13973652|13973652|13973652 AAGACT 6mer3-8 dme-miR-14-3p 2R - 13973080 13973107 3'utr CG6701 FlyBase G17496.1 TGTGTCATCGGTTCTGAAGACTTGAAAC 5 13973093 0.794693685 2 5 35 1 0.84509804 0.428571429 0.4 0.571428571 5 0 0 7 2R:13973080-13973107 6 10 1333 FBgn0033889 5221.26 120.4433333 183.47 0.001915247 0.083026596 0.054504824 2 2 2 0.01 dme-bantam-3p 7mer-m8 TGATCTC 2R 13973583 13973589 - 2R_13973583_13973589_- 0.661615243 0.661615243 0.661615243 0 CG6701 FBtr0339957|FBtr0303991|FBtr0303990|FBtr0303989 13972982|13972982|13972982|13972982 13973652|13973652|13973652|13973652 2R - 13973514 13973623 3'utr CG6701 FlyBase G23080.1 CTATAGGGACAACGTGATTGCTTGGCCGAACAAGTGATCTCGCTGTCCTCTTTTTGACTTTGCTATTGGCATTTGTGCGATCTGCGATCATCCATGCGCCAAGTAGCAAA 35 13973589 0.985100945 13 33 265 0.930232558 1.602059991 0.139534884 0.228571429 0.372093023 35 3 0 40 2R:13973514-13973623 7 CG6701 FBtr0303990|FBtr0303989|FBtr0339957|FBtr0303991 13972982|13972982|13972982|13972982 13973652|13973652|13973652|13973652 TGATCTC 7mer-m8 dme-bantam-3p 2R - 13973552 13973622 3'utr CG6701 FlyBase G17500.1 TATAGGGACAACGTGATTGCTTGGCCGAACAAGTGATCTCGCTGTCCTCTTTTTGACTTTGCTATTGGCAT 22 13973607 0.874786682 6 19 149 0.870967742 1.431363764 0.032258065 0.318181818 0.516129032 22 4 0 27 2R:13973552-13973622 7 12.5 1334 FBgn0033889 5221.26 120.4433333 183.47 0.002394058 0.103783245 0.06813103 0 18 9 0.01 dme-miR-33-5p 7mer-A1 AATGCAA 2R 13985083 13985089 - 2R_13985083_13985089_- 0.782911824 0.782911824 0.782911824 0 RN-tre FBtr0087603|FBtr0330626|FBtr0330627 13984813|13984813|13984813 13985779|13985779|13985596 2R - 13985051 13985134 3'utr RN-tre FlyBase G23115.1 GTACCAAACAAAATACAAAGCAACGTTAAAAAGTTACGTCCATGAAATGCAAACGAATGTAAAGGCGAAAGGCAACCAAATATT 45 13985101 0.960432982 8 42 207 0.941176471 1.681241237 0.176470588 0.133333333 0.235294118 45 3 0 48 2R:13985051-13985134 7 RN-tre FBtr0330626|FBtr0330627|FBtr0087603 13984813|13984813|13984813 13985779|13985596|13985779 AATGCAA 7mer-A1 dme-miR-33-5p 2R - 13985031 13985121 3'utr RN-tre FlyBase G17524.1 TACAAAGCAACGTTAAAAAGTTACGTCCATGAAATGCAAACGAATGTAAAGGCGAAAGGCAACCAAATATTAATTGAAAACTATAGATAAC 35 13985101 0.957442506 7 35 166 1 1.748188027 0.25 0.514285714 0.696428571 35 0 0 56 2R:13985031-13985121 7 29 1335 FBgn0020620 1475.656667 67.63 103.75 0.019652268 0.428803785 0.279518072 12 12 12 0.01 dme-miR-252-5p 8mer-m1 GTACTTAG 2R 13986882 13986889 - 2R_13986882_13986889_- 0.636789085 0.636789085 0.636789085 0 RN-tre FBtr0087605 13986424 13987040 2R - 13986850 13986910 3'utr RN-tre FlyBase G23120.1 ATTCGGTAGTAATATCCACATGTACTTAGCTTTAATTTTTGTATTGTCGAACCGACAGAAA 13 13986889 0.989089527 4 13 123 1 1.255272505 0 0.230769231 0.444444444 13 0 0 18 2R:13986850-13986910 8 RN-tre FBtr0087605 13986424 13987040 GTACTTAG 8mer-m1 dme-miR-252-5p 2R - 13986843 13986909 3'utr RN-tre FlyBase G17530.1 TTCGGTAGTAATATCCACATGTACTTAGCTTTAATTTTTGTATTGTCGAACCGACAGAAACCTGAAA 10 13986890 0.98649581 3 10 90 1 1.176091259 0 0.4 0.6 10 0 0 15 2R:13986843-13986909 8 11 1336 FBgn0020620 1475.656667 67.63 103.75 0.007454308 0.162649712 0.106024096 0 1 0.5 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT 2R 14058116 14058121 + 2R_14058116_14058121_+ 1 1 1 0 mam FBtr0339956|FBtr0087597|FBtr0087596 14057913|14057913|14057913 14060356|14060356|14058697 2R + 14058088 14058134 3'utr mam FlyBase G15704.1 AACCGCCCCACACGGCCCCGCCCCCCTTGTTCCTGCCAACGAAGTTA 61 14058117 0.958972264 5 60 246 1 1.819543936 0.303030303 0.066666667 0.151515152 60 0 0 66 2R:14058088-14058134 6 mam FBtr0087596|FBtr0339956|FBtr0087597 14057913|14057913|14057913 14058697|14060356|14060356 GTTCCT 6mer2-7 dme-miR-276a-3p 2R + 14058091 14058135 3'utr mam FlyBase G11911.1 CGCCCCACACGGCCCCGCCCCCCTTGTTCCTGCCAACGAAGTTAT 29 14058117 0.947479265 3 28 121 0.975609756 1.301029996 0.292682927 0.275862069 0.487804878 29 0 1 40 2R:14058091-14058135 6 44.5 1337 FBgn0002643 1627.19 27.33666667 41.79333333 0.027347759 1.627850262 1.06476312 -1 -1 -1 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 14058480 14058487 + 2R_14058480_14058487_+ 0.500120318 0.500120318 0.500120318 0 mam FBtr0339956|FBtr0087597|FBtr0087596 14057913|14057913|14057913 14060356|14060356|14058697 2R + 14058442 14058492 3'utr mam FlyBase G15706.1 TACAGATACTACAGACTCGTTGTGCAACTTAAGCACTTGTACTTAATGCAA 12 14058479 0.982339257 4 12 91 1 1.079181246 0.083333333 0 0 12 0 0 12 2R:14058442-14058492 8 mam FBtr0087596|FBtr0339956|FBtr0087597 14057913|14057913|14057913 14058697|14060356|14060356 GTACTTAA 8mer-A1 dme-miR-252-5p 2R + 14058442 14058492 3'utr mam FlyBase G11914.1 TACAGATACTACAGACTCGTTGTGCAACTTAAGCACTTGTACTTAATGCAA 7 14058479 0.980313255 3 7 52 1 1 0 0.285714286 0.5 7 0 0 10 2R:14058442-14058492 8 8 1338 FBgn0002643 1627.19 27.33666667 41.79333333 0.004916451 0.292647238 0.191418089 1 1 1 0.01 dme-miR-283-5p 8mer-m1 TGATATTT 2R 14058781 14058788 + 2R_14058781_14058788_+ 0.555593841 0.555593841 0.555593841 0 mam FBtr0339956|FBtr0087597 14057913|14057913 14060356|14060356 2R + 14058731 14058801 stop_codon mam FlyBase G15707.1 AATGGGAAAACAGATCGAGAAACTTTCAGAATAAAGAGCAAAAATATTGGTGATATTTTAAATGCTTAAAC 141 14058777 0.984709609 5 139 1113 0.987804878 2.209515015 0.012195122 0.14893617 0.268292683 141 2 0 162 2R:14058731-14058801 8 mam FBtr0339956|FBtr0087597 14057913|14057913 14060356|14060356 TGATATTT 8mer-m1 dme-miR-283-5p 2R + 14058741 14058801 stop_codon mam FlyBase G11915.1 CAGATCGAGAAACTTTCAGAATAAAGAGCAAAAATATTGGTGATATTTTAAATGCTTAAAC 91 14058777 0.961627573 8 90 719 0.991304348 2.056904851 0 0.230769231 0.391304348 91 1 0 114 2R:14058741-14058801 8 113.5 1339 FBgn0002643 1627.19 27.33666667 41.79333333 0.069752149 4.151932691 2.715744138 4 4 4 0.01 dme-miR-33-5p 7mer-A1 AATGCAA 2R 14060560 14060566 - 2R_14060560_14060566_- 0.782911824 0.782911824 0.782911824 0 Prosap FBtr0339764 14060454 14062325 2R - 14060499 14060593 3'utr Prosap FlyBase G23139.1 AGCACACACCACCACACATACACTTTAAATGCAAGTATTTCAAATGGAATAATACGGAAATATATATCATAAGTCGTAAAATATGCAATTATGTA 11 14060575 0.974862043 8 11 61 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 2R:14060499-14060593 7 Prosap FBtr0339764 14060454 14062325 AATGCAA 7mer-A1 dme-miR-33-5p 2R - 14060535 14060578 3'utr Prosap FlyBase G17542.1 ACATACACTTTAAATGCAAGTATTTCAAATGGAATAATACGGAA 5 14060568 0.966030999 3 5 27 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2R:14060535-14060578 7 4.5 1340 FBgn0040752 4396.62 61.27 94.33 0.001023514 0.073445406 0.047704866 9 2 5.5 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 2R 14060765 14060770 - 2R_14060765_14060770_- 1 1 1 0 Prosap FBtr0339764 14060454 14062325 2R - 14060764 14060812 3'utr Prosap FlyBase G23140.1 ATGTAAACAAATATGATTAGCCATCAAGCTTGTTAGTTTTTAAGTTAAA 33 14060780 0.704069052 10 31 363 0.941176471 1.204119983 0.235294118 0.03030303 0.058823529 33 1 1 32 2R:14060764-14060812 6 Prosap FBtr0339764 14060454 14062325 AGTTAA 6mer3-8 dme-miR-999-3p 2R - 14060766 14060804 3'utr Prosap FlyBase G17543.1 AAATATGATTAGCCATCAAGCTTGTTAGTTTTTAAGTTA 18 14060780 0.7070645 5 16 185 0.911764706 1.491361694 0.470588235 0.555555556 0.764705882 18 3 0 31 2R:14060766-14060804 4 16 1341 FBgn0040752 4396.62 61.27 94.33 0.003639159 0.26113922 0.169617301 10 10 10 0.01 dme-miR-12-5p 6mer2-7 ATACTC 2R 14060911 14060916 - 2R_14060911_14060916_- 1 1 1 0 Prosap FBtr0339764 14060454 14062325 2R - 14060860 14060930 3'utr Prosap FlyBase G23141.1 CGAGAATATATTGGATACTCTAGCGTATAACTAGATTTTAGCACACTTTTTAGTTCTCGCAATAGTTGCTA 12 14060920 0.633801613 7 11 99 0.923076923 1.079181246 0.076923077 0.083333333 0.153846154 12 1 0 12 2R:14060860-14060930 6 Prosap FBtr0339764 14060454 14062325 ATACTC 6mer2-7 dme-miR-12-5p 2R - 14060847 14060930 3'utr Prosap FlyBase G17544.1 CGAGAATATATTGGATACTCTAGCGTATAACTAGATTTTAGCACACTTTTTAGTTCTCGCAATAGTTGCTAATTATTTGTAAAT 19 14060920 0.787895924 9 17 143 0.958333333 1.361727836 0.5 0.263157895 0.416666667 19 1 0 23 2R:14060847-14060930 6 8.5 1342 FBgn0040752 4396.62 61.27 94.33 0.001933303 0.138730211 0.090109191 4 4 4 0.01 dme-miR-1006-3p 7mer-m8 CGAATTT 2R 14061620 14061626 - 2R_14061620_14061626_- 0.661614704 0.661614704 0.661614704 0 Prosap FBtr0339765|FBtr0339763|FBtr0087601|FBtr0339764 14061497|14061497|14061497|14060454 14062325|14062325|14062325|14062325 2R - 14061595 14061630 3'utr Prosap FlyBase G23146.1 TAGCCGAATTTCCAGTCAAGTCAAGTCAACTAAACT 5 14061621 0.965974023 2 5 27 1 0.84509804 0 0.2 0.428571429 5 0 0 7 2R:14061595-14061630 7 Prosap FBtr0087601|FBtr0339764|FBtr0339765|FBtr0339763 14061497|14060454|14061497|14061497 14062325|14062325|14062325|14062325 CGAATTT 7mer-m8 dme-miR-1006-3p 2R - 14061595 14061636 3'utr Prosap FlyBase G17548.1 AGCATTTAGCCGAATTTCCAGTCAAGTCAAGTCAACTAAACT 8 14061621 0.962460402 2 7 38 1 1.079181246 0 0.5 0.666666667 8 0 0 12 2R:14061595-14061636 7 6 1343 FBgn0040752 4396.62 61.27 94.33 0.001364685 0.097927207 0.063606488 -5 -5 -5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 14062073 14062079 - 2R_14062073_14062079_- 0.801970437 0.801970437 0.801970437 0 Prosap FBtr0339765|FBtr0339765|FBtr0339765|FBtr0339763|FBtr0339763|FBtr0339763|FBtr0087601|FBtr0087601|FBtr0087601|FBtr0339764|FBtr0339764|FBtr0339764 14061497|14061497|14061497|14061497|14061497|14061497|14061497|14061497|14061497|14060454|14060454|14060454 14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325 2R - 14062041 14062100 3'utr Prosap FlyBase G23151.1 ACTTTTATTATATTTATTGCGTGTGATATAAATTTATGCAAGCTGCCCGCGAGCAGCAAC 131 14062086 0.992824521 11 122 1457 0.91875 1.565257343 0.05 0.20610687 0.35 131 10 3 147 2R:14062041-14062100 7 Prosap FBtr0087601|FBtr0087601|FBtr0087601|FBtr0339764|FBtr0339764|FBtr0339764|FBtr0339765|FBtr0339765|FBtr0339765|FBtr0339763|FBtr0339763|FBtr0339763 14061497|14061497|14061497|14060454|14060454|14060454|14061497|14061497|14061497|14061497|14061497|14061497 14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 14062040 14062135 3'utr Prosap FlyBase G17553.1 GAATTAGAATTTTCTTGATTTCGAAATCTTAAGTTACTTTTATTATATTTATTGCGTGTGATATAAATTTATGCAAGCTGCCCGCGAGCAGCAACT 95 14062086 0.992747966 14 87 1022 0.905109489 2.093421685 0.051094891 0.336842105 0.540145985 95 13 0 124 2R:14062040-14062135 7 105 1344 FBgn0040752 4396.62 61.27 94.33 0.023881982 1.71372613 1.113113538 7 7 7 0.01 dme-miR-34-5p 6mer2-7 ACTGCC 2R 14062221 14062226 - 2R_14062221_14062226_- 1 1 1 0 Prosap FBtr0339765|FBtr0339763|FBtr0087601|FBtr0339764 14061497|14061497|14061497|14060454 14062325|14062325|14062325|14062325 2R - 14062209 14062321 3'utr Prosap FlyBase G23153.1 AGCCTGGGGAATCAAATCAACCGTTTGCCAAATCGTTAAATCGTTAGTTAGTGTAAGTCAACAACAGTCATTGCCACTCACAACGAATAGCCGCAACTGCCTGCACCCAGAAA 51 14062220 0.957023551 12 49 194 0.967213115 1.770852012 0.06557377 0.137254902 0.278688525 51 2 0 59 2R:14062209-14062321 6 Prosap FBtr0087601|FBtr0339764|FBtr0339765|FBtr0339763 14061497|14060454|14061497|14061497 14062325|14062325|14062325|14062325 ACTGCC 6mer2-7 dme-miR-34-5p 2R - 14062209 14062317 3'utr Prosap FlyBase G17555.1 TGGGGAATCAAATCAACCGTTTGCCAAATCGTTAAATCGTTAGTTAGTGTAAGTCAACAACAGTCATTGCCACTCACAACGAATAGCCGCAACTGCCTGCACCCAGAAA 35 14062220 0.932919664 8 33 116 1 1.770852012 0.101694915 0.428571429 0.661016949 35 0 0 59 2R:14062209-14062317 6 24.5 1345 FBgn0040752 4396.62 61.27 94.33 0.005572462 0.39986943 0.259726492 -6 -6 -6 0.01 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 14166705 14166712 + 2R_14166705_14166712_+ 0.605654138 0.605654138 0.605654138 0 CG8323 FBtr0087521 14166669 14166991 2R + 14166653 14166715 stop_codon CG8323 FlyBase G15738.1 AAGTATAGTAATCAATGACCCCAAAGATCACTGGCTAGGTAGCATTAATTTAAGTACAAAATT 5 14166702 0.987759734 4 5 34 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2R:14166653-14166715 8 CG8323 FBtr0087521 14166669 14166991 AGTACAAA 8mer-A1 dme-miR-305-5p 2R + 14166675 14166718 3'utr CG8323 FlyBase G11935.1 AAAGATCACTGGCTAGGTAGCATTAATTTAAGTACAAAATTGTT 6 14166702 0.984168723 3 6 53 1 0.954242509 0 0.5 0.666666667 6 0 0 9 2R:14166675-14166718 8 4 1346 FBgn0033903 176.6666667 14.75333333 22.46333333 0.022641509 0.271125169 0.178067963 3 3 3 0.01 dme-miR-276a-3p 6mer3-8 AGTTCC 2R 14166867 14166872 + 2R_14166867_14166872_+ 1 1 1 0 CG8323 FBtr0087521 14166669 14166991 2R + 14166830 14166890 3'utr CG8323 FlyBase G15740.1 TCTGGCTTTAGTCTTTAGTGAGTTAGCTTAATGTCCTAGTTCCAATCTCTTAGATTAGCAA 10 14166879 0.98697821 5 10 87 1 1.041392685 0 0.1 0.181818182 10 0 0 11 2R:14166830-14166890 6 CG8323 FBtr0087521 14166669 14166991 AGTTCC 6mer3-8 dme-miR-276a-3p 2R + 14166859 14166948 3'utr CG8323 FlyBase G11936.1 AATGTCCTAGTTCCAATCTCTTAGATTAGCAAAGCCCCAGAACCAACTTGTGCCTTCATTAAGCTAATTTAAGAGCTCTTCCTGTAGCCA 20 14166879 0.822705524 7 17 146 0.931034483 1.130333768 0.172413793 0.35 0.551724138 20 1 1 27 2R:14166859-14166948 6 8 1347 FBgn0033903 176.6666667 14.75333333 22.46333333 0.045283019 0.542250339 0.356135925 -12 -12 -12 0.01 dme-miR-305-3p 6mer2-7 TGTGCC 2R 14166907 14166912 + 2R_14166907_14166912_+ 1 1 1 0 CG8323 FBtr0087521 14166669 14166991 2R + 14166895 14166950 3'utr CG8323 FlyBase G15741.1 CCAGAACCAACTTGTGCCTTCATTAAGCTAATTTAAGAGCTCTTCCTGTAGCCATT 23 14166907 0.847413638 7 22 172 0.961538462 1.096910013 0.038461538 0.130434783 0.230769231 23 0 1 25 2R:14166895-14166950 6 CG8323 FBtr0087521 14166669 14166991 TGTGCC 6mer2-7 dme-miR-305-3p 2R + 14166859 14166948 3'utr CG8323 FlyBase G11936.1 AATGTCCTAGTTCCAATCTCTTAGATTAGCAAAGCCCCAGAACCAACTTGTGCCTTCATTAAGCTAATTTAAGAGCTCTTCCTGTAGCCA 20 14166907 0.822705524 7 17 146 0.931034483 1.130333768 0.172413793 0.35 0.551724138 20 1 1 27 2R:14166859-14166948 6 12.5 1348 FBgn0033903 176.6666667 14.75333333 22.46333333 0.070754717 0.847266155 0.556462383 0 0 0 0.01 dme-miR-999-3p 6mer2-7 GTTAAC 2R 14181645 14181650 + 2R_14181645_14181650_+ 1 1 1 0 cg FBtr0339961|FBtr0290035|FBtr0112795|FBtr0346946 14181377|14181377|14180447|14180447 14182838|14182838|14182838|14182838 2R + 14181612 14181680 3'utr cg FlyBase G15767.1 TAGCGGTTAAGTGATCGGATTGTACACATAAATGTTAACTAGCGTTACACACATGAACACACCTTATAT 104 14181631 0.908014466 10 97 735 0.941666667 1.451018452 0.125 0.105769231 0.225 104 4 3 113 2R:14181612-14181680 6 cg FBtr0112795|FBtr0346946|FBtr0339961|FBtr0290035 14180447|14180447|14181377|14181377 14182838|14182838|14182838|14182838 GTTAAC 6mer2-7 dme-miR-999-3p 2R + 14181612 14181693 3'utr cg FlyBase G11958.1 TAGCGGTTAAGTGATCGGATTGTACACATAAATGTTAACTAGCGTTACACACATGAACACACCTTATATAATATATATATAC 49 14181631 0.981765842 10 46 344 0.944444444 1.531478917 0.111111111 0.387755102 0.583333333 49 3 1 68 2R:14181612-14181693 6 50.5 1349 FBgn0000289 2715.146667 76.72333333 117.4833333 0.018599364 0.65820915 0.429848205 14 14 14 0.01 dme-miR-13b-2-5p 7mer-A1 TTGACGA 2R 14181915 14181921 + 2R_14181915_14181921_+ 0.782911824 0.782911824 0.782911824 0 cg FBtr0339961|FBtr0290035|FBtr0112795|FBtr0346946 14181377|14181377|14180447|14180447 14182838|14182838|14182838|14182838 2R + 14181876 14181959 3'utr cg FlyBase G15768.1 ATGCCTAAGTGTAAACTGTATACATATTAACATGAAACATTGACGACTACGGATAGTACTAGACACTAGCATGCGTTGCACTTG 23 14181935 0.971449635 9 21 124 0.92 1.06069784 0.28 0.086956522 0.16 23 1 1 23 2R:14181876-14181959 7 cg FBtr0112795|FBtr0346946|FBtr0339961|FBtr0290035 14180447|14180447|14181377|14181377 14182838|14182838|14182838|14182838 TTGACGA 7mer-A1 dme-miR-13b-2-5p 2R + 14181783 14181958 3'utr cg FlyBase G11959.1 TAAAGCGTTACGTTCAATTGGTTTTACGCATTACACGATTTTTAATAACACAACTTATACACAAACTTATATTCAAATAGACGAAAAATATTTATGCCTAAGTGTAAACTGTATACATATTAACATGAAACATTGACGACTACGGATAGTACTAGACACTAGCATGCGTTGCACTT 25 14181934 0.972757612 14 23 149 0.925 1.091080469 0.275 0.44 0.65 25 1 2 37 2R:14181783-14181958 7 9.5 1350 FBgn0000289 2715.146667 76.72333333 117.4833333 0.00349889 0.123821523 0.080862534 -20 -19 -19.5 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 14215232 14215239 - 2R_14215232_14215239_- 0.500120318 0.500120318 0.500120318 0 RpS23 FBtr0087575 14215094 14215434 2R - 14215216 14215280 3'utr RpS23 FlyBase G23204.1 GAATATAGTGATTCCAATCGATTCTGTTTTATAAGGCCGATGTACTTAATGAGTTACATACTTGC 48 14215240 0.984389598 9 44 342 0.909090909 1.397940009 0.2 0.145833333 0.254545455 48 4 1 50 2R:14215216-14215280 8 RpS23 FBtr0087575 14215094 14215434 GTACTTAA 8mer-A1 dme-miR-252-5p 2R - 14215184 14215267 3'utr RpS23 FlyBase G17590.1 CCAATCGATTCTGTTTTATAAGGCCGATGTACTTAATGAGTTACATACTTGCATATTTAAACTATAACAGTTTACAGTTTTCGT 30 14215240 0.988945282 7 26 246 0.82 1.135662602 0.16 0.466666667 0.68 30 7 2 41 2R:14215184-14215267 8 37 1351 FBgn0033912 13740.81 3287.363333 4993.36 0.002692709 0.011255221 0.00740984 1 1 1 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2R 14215327 14215333 - 2R_14215327_14215333_- 0.443131018 0.443131018 0.443131018 0 RpS23 FBtr0087575 14215094 14215434 2R - 14215316 14215352 3'utr RpS23 FlyBase G23205.1 GTTAAATGTTTCAATTAAATGTGATTTCCTTGAATAT 53 14215327 0.735824712 5 52 499 0.985915493 1.84509804 0.169014085 0.20754717 0.408450704 53 1 0 70 2R:14215316-14215352 7 RpS23 FBtr0087575 14215094 14215434 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 14215315 14215457 stop_codon RpS23 FlyBase G17591.1 AGAAGGAACGCCCAAGATCTTAGATGAACATGCATCTAATCTTTTTCCAGACAAGCAGAGTTAGGGTTTTACAAATCTAAATAAACAAAAAACAGAAACAAACTTGTTAAATGTTTCAATTAAATGTGATTTCCTTGAATATA 95 14215327 0.919477356 24 85 809 0.919708029 1.197280558 0.145985401 0.326315789 0.532846715 95 4 7 126 2R:14215315-14215457 7 59.5 1352 FBgn0033912 13740.81 3287.363333 4993.36 0.004330167 0.018099612 0.011915824 -6 -6 -6 0.01 dme-miR-2b-2-5p 6mer2-7 TGAAGA 2R 14229591 14229596 + 2R_14229591_14229596_+ 1 1 1 0 CG8468 FBtr0087533|FBtr0087534|FBtr0087532 14229566|14229566|14229566 14230620|14230620|14230620 2R + 14229537 14229613 stop_codon CG8468 FlyBase G15802.1 CGAGAAGCTAACACCCCTGCCGGCGGCCTAAGGAGCTGCTTGGATCGGAGCGAATGAAGACATGCCAGACAGCCTGA 21 14229591 0.80576175 8 19 40 0.904761905 1.278753601 0.333333333 0 0 21 2 0 19 2R:14229537-14229613 6 CG8468 FBtr0087532|FBtr0087533|FBtr0087534 14229566|14229566|14229566 14230620|14230620|14230620 TGAAGA 6mer2-7 dme-miR-2b-2-5p 2R + 14229536 14229609 stop_codon CG8468 FlyBase G11989.1 ACGAGAAGCTAACACCCCTGCCGGCGGCCTAAGGAGCTGCTTGGATCGGAGCGAATGAAGACATGCCAGACAGC 16 14229591 0.991188258 6 15 31 0.956521739 1.342422681 0.47826087 0.375 0.565217391 16 1 0 22 2R:14229536-14229609 6 12 1353 FBgn0033913 3375.036667 105.6 161.63 0.003555517 0.113636364 0.074243643 0 0 0 0.01 dme-miR-184-5p 7mer-A1 GATAAGA 2R 14229765 14229771 + 2R_14229765_14229771_+ 0.782911822 0.782911824 0.782911823 0 CG8468 FBtr0087533|FBtr0087534|FBtr0087532 14229566|14229566|14229566 14230620|14230620|14230620 2R + 14229632 14229825 3'utr CG8468 FlyBase G15803.1 AGCCACAACTATCTTCGATAGCACCTTTCGGTATTGGCAACATTAATTGACAATCACTCATCCTGTCGAAGGAACTCCCGATTTCGGAGGGAAGCGAGTGCGAAAGCGTGTTCCGAGTACTTAATACAATTAAGATAAGACTAATCGTAATGTTGTGCCTTCAGCGATATCGAGTGCCTACCACACACACCCCT 75 14229756 0.974011666 26 69 438 0.892857143 1.875061263 0.273809524 0.106666667 0.202380952 75 9 0 75 2R:14229632-14229825 7 CG8468 FBtr0087532|FBtr0087533|FBtr0087534 14229566|14229566|14229566 14230620|14230620|14230620 GATAAGA 7mer-A1 dme-miR-184-5p 2R + 14229724 14229822 3'utr CG8468 FlyBase G11990.2 AGCGAGTGCGAAAGCGTGTTCCGAGTACTTAATACAATTAAGATAAGACTAATCGTAATGTTGTGCCTTCAGCGATATCGAGTGCCTACCACACACACC 36 14229756 0.954831493 14 33 219 0.918367347 1.653212514 0.102040816 0.305555556 0.489795918 36 4 0 45 2R:14229724-14229822 7 17 1354 FBgn0033913 3375.036667 105.6 161.63 0.005036982 0.160984848 0.105178494 9 9 9 0.01 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 14229904 14229910 + 2R_14229904_14229910_+ 0.823349562 0.823349562 0.823349562 0 CG8468 FBtr0087533|FBtr0087534|FBtr0087532 14229566|14229566|14229566 14230620|14230620|14230620 2R + 14229834 14229925 3'utr CG8468 FlyBase G15804.1 ACAACCAACCCTATCCCAAATCACACGCATACGAGCAGAGTGGAGCGCGAGTGTAAATTATGTTTCTATAAGCTTTAGTGGAGGAGCCCATA 571 14229902 0.795326617 16 533 4754 0.937125749 1.517820732 0.393712575 0.133333333 0.260479042 570 24 18 626 2R:14229834-14229925 7 CG8468 FBtr0087532|FBtr0087533|FBtr0087534 14229566|14229566|14229566 14230620|14230620|14230620 AGCTTTA 7mer-A1 dme-miR-79-3p 2R + 14229883 14229925 3'utr CG8468 FlyBase G11991.2 AGTGTAAATTATGTTTCTATAAGCTTTAGTGGAGGAGCCCATA 290 14229902 0.755286871 8 269 2449 0.934939759 1.474888373 0.568674699 0.34375 0.544578313 288 15 12 388 2R:14229883-14229925 7 420 1355 FBgn0033913 3375.036667 105.6 161.63 0.124443092 3.977272727 2.598527501 2 2 2 0.01 dme-miR-277-3p 6mer3-8 TGCATT 2R 14230561 14230566 + 2R_14230561_14230566_+ 1 1 1 0 CG8468 FBtr0087533|FBtr0087534|FBtr0087532 14229566|14229566|14229566 14230620|14230620|14230620 2R + 14230438 14230611 3'utr CG8468 FlyBase G15806.1 AAACACACACGGACCGCTACATACTCAGCACGATGAGTGCGTTTCGCGTTAACGTTTATCAACTACAATTACATTAAAACAGAATGAATGATTTATATTACATTTAAATTAATGAGTTTACATTGCATTGCATGCGACATAAGGTTACACTTCATAAACAATAAAGACGATTTC 52 14230582 0.980736815 22 48 342 0.923076923 1.77815125 0.061538462 0.192307692 0.353846154 52 5 0 60 2R:14230438-14230611 6 CG8468 FBtr0087532|FBtr0087533|FBtr0087534 14229566|14229566|14229566 14230620|14230620|14230620 TGCATT 6mer3-8 dme-miR-277-3p 2R + 14230503 14230625 3'utr CG8468 FlyBase G11995.1 CAATTACATTAAAACAGAATGAATGATTTATATTACATTTAAATTAATGAGTTTACATTGCATTGCATGCGACATAAGGTTACACTTCATAAACAATAAAGACGATTTCAATAATACGAACTA 22 14230531 0.888279803 17 22 126 1 1.491361694 0.258064516 0.272727273 0.483870968 22 0 0 31 2R:14230503-14230625 6 4 1356 FBgn0033913 3375.036667 105.6 161.63 0.001185172 0.037878788 0.024747881 -21 30 4.5 0.01 dme-miR-965-3p 6mer2-7 ACGCTT 2R 14230681 14230686 - 2R_14230681_14230686_- 1 0.999999844 0.999999922 1.41E-07 Opa1 FBtr0339761 14230609 14232701 2R - 14230621 14230760 3'utr Opa1 FlyBase G23211.1 AAGACACAACACCCGAGGCGTTACTTATTTAACTTGATAGTTTAAGACCACATTTGAAATGTTTGTTCATAGTCACGCTTGAGCCCCTTAGTTAAGCATACTTTGTGCTCCGAAAGTAATAAACAAATAGATCGTTAGTT 52 14230690 0.985720637 20 48 393 0.93442623 1.45484486 0.229508197 0.134615385 0.262295082 52 3 1 57 2R:14230621-14230760 6 Opa1 FBtr0339759|FBtr0087574|FBtr0339760|FBtr0339761|FBtr0087573 14230609|14230609|14230609|14230609|14230609 14230773|14230773|14230773|14232701|14230773 ACGCTT 6mer2-7 dme-miR-965-3p 2R - 14230647 14230706 3'utr Opa1 FlyBase G17597.1 TGAAATGTTTGTTCATAGTCACGCTTGAGCCCCTTAGTTAAGCATACTTTGTGCTCCGAA 10 14230682 0.745804669 5 8 75 0.933333333 1.146128036 0.066666667 0.3 0.533333333 10 1 0 14 2R:14230647-14230706 6 10 1357 FBgn0261276 1194.833333 44.64 68.46666667 0.008369368 0.224014337 0.146056475 4 -4 0 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 2R 14230734 14230739 - 2R_14230734_14230739_- 1 1 1 0 Opa1 FBtr0339761|FBtr0339761 14230609|14230609 14232701|14232701 2R - 14230621 14230760 3'utr Opa1 FlyBase G23211.1 AAGACACAACACCCGAGGCGTTACTTATTTAACTTGATAGTTTAAGACCACATTTGAAATGTTTGTTCATAGTCACGCTTGAGCCCCTTAGTTAAGCATACTTTGTGCTCCGAAAGTAATAAACAAATAGATCGTTAGTT 52 14230732 0.985720637 20 48 393 0.93442623 1.45484486 0.229508197 0.134615385 0.262295082 52 3 1 57 2R:14230621-14230760 6 Opa1 FBtr0339759|FBtr0339759|FBtr0087574|FBtr0087574|FBtr0339760|FBtr0339760|FBtr0339761|FBtr0339761|FBtr0087573|FBtr0087573 14230609|14230609|14230609|14230609|14230609|14230609|14230609|14230609|14230609|14230609 14230773|14230773|14230773|14230773|14230773|14230773|14232701|14232701|14230773|14230773 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 2R - 14230712 14230759 3'utr Opa1 FlyBase G17597.2 AGACACAACACCCGAGGCGTTACTTATTTAACTTGATAGTTTAAGACC 12 14230740 0.980322849 4 11 64 1 1.278753601 0.263157895 0.5 0.684210526 12 0 0 19 2R:14230712-14230759 6 17.5 1358 FBgn0261276 1194.833333 44.64 68.46666667 0.014646394 0.39202509 0.255598832 -7 1 -3 0.01 dme-miR-184-5p 6mer3-8 TGATAA 2R 14231362 14231367 - 2R_14231362_14231367_- 1 1 1 0 Opa1 FBtr0339761 14230609 14232701 2R - 14231319 14231422 5'utr Opa1 FlyBase G23214.1 ATTTGCCCACCCTGACCCATGATGAACTGACTACGGTTCGCAAGAACCTTCAGCGTGATAACGTGGATGTGGACACGGACTACATAAGGCAAACGTGGTTCCCG 34 14231373 0.967891792 12 32 177 0.944444444 1.531478917 0.305555556 0.058823529 0.111111111 34 2 0 34 2R:14231319-14231422 6 Opa1 FBtr0339761 14230609 14232701 TGATAA 6mer3-8 dme-miR-184-5p 2R - 14231320 14231404 5'utr Opa1 FlyBase G17598.1 ATGATGAACTGACTACGGTTCGCAAGAACCTTCAGCGTGATAACGTGGATGTGGACACGGACTACATAAGGCAAACGTGGTTCCC 16 14231373 0.982964247 7 11 77 0.7 0.669006781 0.2 0.1875 0.35 16 4 2 14 2R:14231320-14231404 6 14 1359 FBgn0261276 1194.833333 44.64 68.46666667 0.011717115 0.313620072 0.204479065 6 6 6 0.01 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 2R 14231557 14231564 - 2R_14231557_14231564_- 0.674982063 0.674982063 0.674982063 0 Opa1 FBtr0339761 14230609 14232701 2R - 14231544 14231586 5'utr Opa1 FlyBase G23215.1 TGCGACGAATTACCCACTGGCAGTACCTGACGCAGGATCAGCA 15 14231569 0.826937721 6 15 57 1 1.204119983 0.4375 0.066666667 0.125 15 0 0 16 2R:14231544-14231586 8 Opa1 FBtr0339761 14230609 14232701 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2R - 14231536 14231585 5'utr Opa1 FlyBase G17600.1 GCGACGAATTACCCACTGGCAGTACCTGACGCAGGATCAGCAGAAGAGGC 17 14231569 0.935518732 5 16 64 0.954545455 1.322219295 0.227272727 0.235294118 0.409090909 17 1 0 21 2R:14231536-14231585 8 16 1360 FBgn0261276 1194.833333 44.64 68.46666667 0.013390989 0.358422939 0.23369036 5 5 5 0.01 dme-miR-965-3p 8mer-A1 TACGCTTA 2R 14235883 14235890 - 2R_14235883_14235890_- 0.625364919 0.625364919 0.625364919 0 CG8485 FBtr0087572|FBtr0087571|FBtr0087569 14235785|14235785|14235785 14236079|14236079|14236079 2R - 14235861 14235935 3'utr CG8485 FlyBase G23226.1 ATTTAAATTTAGTGGTAGCGTAATTGTTTTGTCTGTCGTCGTCATTACGCTTAAATTATTCTAAATATATTAATT 127 14235891 0.837384015 5 123 1266 0.979166667 1.672097858 0.138888889 0.134920635 0.243055556 126 1 2 141 2R:14235861-14235935 8 CG8485 FBtr0087569|FBtr0087572|FBtr0087571 14235785|14235785|14235785 14236079|14236079|14236079 TACGCTTA 8mer-A1 dme-miR-965-3p 2R - 14235866 14235913 3'utr CG8485 FlyBase G17610.1 ATTGTTTTGTCTGTCGTCGTCATTACGCTTAAATTATTCTAAATATAT 59 14235891 0.81672171 5 57 565 0.969387755 1.375663614 0.142857143 0.338983051 0.602040816 59 0 3 95 2R:14235866-14235913 8 90.5 1361 FBgn0033915 1584.563333 63.64333333 98.23 0.057113527 1.421987116 0.921307136 1 1 1 0.01 dme-miR-282-5p 7mer-A1 GAGGCTA 2R 14243425 14243431 + 2R_14243425_14243431_+ 0.823349562 0.823349562 0.823349562 0 CG8494 FBtr0087535 14243257 14243655 2R + 14243392 14243444 3'utr CG8494 FlyBase G15814.1 AGTAGTTTTATACCTCAGTGTTTTGTTGGGGTGGAGGCTATATAAACTATGTA 23 14243423 0.981281692 5 23 167 1 1.431363764 0.074074074 0.086956522 0.222222222 23 0 0 27 2R:14243392-14243444 7 CG8494 FBtr0087535 14243257 14243655 GAGGCTA 7mer-A1 dme-miR-282-5p 2R + 14243401 14243439 3'utr CG8494 FlyBase G12004.1 ATACCTCAGTGTTTTGTTGGGGTGGAGGCTATATAAACT 14 14243423 0.950742975 4 14 85 1 1.278753601 0.105263158 0.357142857 0.526315789 14 0 0 19 2R:14243401-14243439 7 17.5 1362 FBgn0033916 369.3366667 13.09333333 20.11666667 0.047382244 1.336558045 0.869925435 2 2 2 0.01 dme-miR-968-5p 6mer3-8 ACTACT 2R 14243507 14243512 + 2R_14243507_14243512_+ 1 1 1 0 CG8494 FBtr0087535 14243257 14243655 2R + 14243461 14243566 3'utr CG8494 FlyBase G15815.1 ATTAATCGTATTGCTATCCCGGCGCCTTACCAGTAATCTGATACCAACTACTGGCCAATGGTGATTTTGTATATAGTATGAGAGTGCTTTAATTGGTGTAACGATA 37 14243526 0.772165882 16 35 275 0.955555556 1.633468456 0.577777778 0.162162162 0.311111111 37 2 0 43 2R:14243461-14243566 6 CG8494 FBtr0087535 14243257 14243655 ACTACT 6mer3-8 dme-miR-968-5p 2R + 14243492 14243532 3'utr CG8494 FlyBase G12005.1 AGTAATCTGATACCAACTACTGGCCAATGGTGATTTTGTAT 31 14243526 0.614543243 6 29 223 0.960784314 1.69019608 0.470588235 0.483870968 0.68627451 31 2 0 49 2R:14243492-14243532 6 27.5 1363 FBgn0033916 369.3366667 13.09333333 20.11666667 0.074457812 2.100305499 1.367025684 -19 -19 -19 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 2R 14252662 14252667 - 2R_14252662_14252667_- 1 1 1 0 Hsc70-5 FBtr0339969|FBtr0087568 14252596|14252596 14253189|14253189 2R - 14252614 14252737 3'utr Hsc70-5 FlyBase G23238.1 ATAAGCAGATGCTCATTTGGAGGTTTAAATTTAAGATAAATTGTATGTTGGTTTCCAGTGGACAACCAAATTGACTGGGTAATATGCAATTAAATTTAAACAAATCGATGTAAACTTAAAATAA 76 14252667 0.978910554 17 68 442 0.915789474 1.094421213 0.252631579 0.210526316 0.368421053 76 2 6 87 2R:14252614-14252737 6 Hsc70-5 FBtr0087568|FBtr0339969 14252596|14252596 14253189|14253189 TTGACT 6mer3-8 dme-miR-1012-3p 2R - 14252620 14252694 3'utr Hsc70-5 FlyBase G17618.1 TATGTTGGTTTCCAGTGGACAACCAAATTGACTGGGTAATATGCAATTAAATTTAAACAAATCGATGTAAACTTA 63 14252667 0.957973607 11 58 356 0.93902439 1.40936947 0.463414634 0.26984127 0.43902439 63 3 2 77 2R:14252620-14252694 6 56 1364 FBgn0001220 2208.986667 96.32 148.0166667 0.02535099 0.581395349 0.378335773 0 0 0 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 2R 14252798 14252804 - 2R_14252798_14252804_- 0.782911824 0.782911824 0.782911824 0 Hsc70-5 FBtr0339969|FBtr0087568 14252596|14252596 14253189|14253189 2R - 14252747 14252926 3'utr Hsc70-5 FlyBase G23238.2 TATTGTTTATTATGCAATCAATCGATTTTCTTTCTCCCTTACTTAAAACACGTGGTCACCGTTGTGTTGTGTTCCTGTAAGATTTTGATTATTTTTACGTATCATCTAAACTAGCTGTAGTTGTACAAAAACGAGCACAGCACAAAAATTGAATTCGAATGGCGGCCACGGCGTTCTAGA 91 14252806 0.99353246 22 79 559 0.894230769 1.123384909 0.201923077 0.131868132 0.240384615 91 5 6 93 2R:14252747-14252926 7 Hsc70-5 FBtr0087568|FBtr0339969 14252596|14252596 14253189|14253189 GTACAAA 7mer-A1 dme-miR-305-5p 2R - 14252744 14252819 3'utr Hsc70-5 FlyBase G17619.2 AAACTAGCTGTAGTTGTACAAAAACGAGCACAGCACAAAAATTGAATTCGAATGGCGGCCACGGCGTTCTAGACGC 28 14252806 0.971750105 5 24 123 0.9 0.954242509 0.225 0.25 0.475 28 1 3 36 2R:14252744-14252819 7 40 1365 FBgn0001220 2208.986667 96.32 148.0166667 0.01810785 0.415282392 0.270239838 2 2 2 0.01 dme-miR-2a-2-5p 7mer-A1 GATGAGA 2R 14252992 14252998 - 2R_14252992_14252998_- 0.782911824 0.782911824 0.782911824 0 Hsc70-5 FBtr0339969|FBtr0087568 14252596|14252596 14253189|14253189 2R - 14252973 14253149 3'utr Hsc70-5 FlyBase G23239.1 ATTTAATAATAACCGCTTCTGGATTTCGATTAAGTTCTACGTTAAACACAAACACTTCATATTCCTTTATTGAATCATGAATCACGCAAAGCCACAAGCATTTACCCAAAATGTGAAGTAAACTATCCGATGCGATTAGGTCAAATCAGACGATGAGACTTCCAAGTAAACAGACGA 75 14252996 0.972880971 17 73 440 0.978947368 1.968482949 0.094736842 0.2 0.368421053 75 2 0 93 2R:14252973-14253149 7 Hsc70-5 FBtr0087568|FBtr0339969 14252596|14252596 14253189|14253189 GATGAGA 7mer-A1 dme-miR-2a-2-5p 2R - 14252981 14253019 3'utr Hsc70-5 FlyBase G17621.1 TGCGATTAGGTCAAATCAGACGATGAGACTTCCAAGTAA 31 14252996 0.949659879 5 28 110 0.975609756 1.602059991 0.146341463 0.290322581 0.463414634 31 1 0 40 2R:14252981-14253019 7 26.5 1366 FBgn0001220 2208.986667 96.32 148.0166667 0.011996451 0.275124585 0.179033893 -2 -2 -2 0.01 dme-miR-277-3p 6mer3-8 TGCATT 2R 14355447 14355452 + 2R_14355447_14355452_+ 0.999909356 1 0.999954678 6.41E-05 CG8613 FBtr0087546 14355267 14355674 2R + 14355430 14355459 3'utr CG8613 FlyBase G15846.1 TGTTAAGTCTGAGAGACTGCATTGCTCCCT 7 14355451 0.620954109 4 6 39 0.857142857 0.77815125 0.142857143 0 0 7 1 0 6 2R:14355430-14355459 6 CG8613 FBtr0087546 14355267 14355674 TGCATT 6mer3-8 dme-miR-277-3p 2R + 14355430 14355460 3'utr CG8613 FlyBase G12028.1 TGTTAAGTCTGAGAGACTGCATTGCTCCCTA 6 14355451 0.729137763 3 6 30 1 0.77815125 0 0 0 6 0 0 6 2R:14355430-14355460 6 6.5 1367 FBgn0033924 155.2666667 6.23 9.476666667 0.041863461 1.043338684 0.685895181 -4 -4 -4 0.01 dme-miR-14-3p 8mer-A1 AAGACTGA 2R 14357959 14357966 - 2R_14357959_14357966_- 0.643565469 0.643565469 0.643565469 0 Arc1 FBtr0087560 14357925 14359435 2R - 14357950 14358001 3'utr Arc1 FlyBase G23277.1 CGTGGAACTGCTAAAAATATAAAACTGTAAAACTAAAGACTGAAACTAGAAA 252 14357968 0.765409429 9 222 851 0.886363636 1.290034611 0.090909091 0.174603175 0.324675325 252 22 13 273 2R:14357950-14358001 8 Arc1 FBtr0087560 14357925 14359435 AAGACTGA 8mer-A1 dme-miR-14-3p 2R - 14357950 14358031 3'utr Arc1 FlyBase G17650.1 TGGGGGCCTATGGAAGACCACAAGTGGTTGCGTGGAACTGCTAAAAATATAAAACTGTAAAACTAAAGACTGAAACTAGAAA 228 14357968 0.742143498 13 192 822 0.852090032 1.043034632 0.118971061 0.285087719 0.475884244 228 23 23 265 2R:14357950-14358031 8 219 1368 FBgn0033926 17202.14 891.9533333 1379.15 0.012730974 0.24552854 0.15879346 2 2 2 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 2R 14413758 14413763 + 2R_14413758_14413763_+ 1 1 1 0 Sin1 FBtr0087487 14413615 14413851 2R + 14413739 14413832 3'utr Sin1 FlyBase G15867.1 TTAGTTGCTAACTAAAGATTGTGTTACACATGTTTGCCTAGCCTGTAAGTATTTATTGAACTCACCCAACTACGAAGCCTGGTCCTGAAAATAA 26 14413757 0.852376367 9 25 173 1 1.477121255 0.066666667 0.153846154 0.266666667 26 0 0 30 2R:14413739-14413832 6 Sin1 FBtr0087487 14413615 14413851 TGTGTT 6mer3-8 dme-miR-317-3p 2R + 14413730 14413831 3'utr Sin1 FlyBase G12045.1 TAAGTTGTATTAGTTGCTAACTAAAGATTGTGTTACACATGTTTGCCTAGCCTGTAAGTATTTATTGAACTCACCCAACTACGAAGCCTGGTCCTGAAAATA 24 14413757 0.934973957 12 20 172 0.766666667 1.06069784 0.066666667 0.166666667 0.333333333 24 6 1 23 2R:14413730-14413831 6 11 1369 FBgn0033935 145.3333333 8.676666667 13.25333333 0.075688073 1.26776796 0.829979879 1 1 1 0.01 dme-bantam-3p 6mer3-8 TGATCT 2R 14497088 14497093 + 2R_14497088_14497093_+ 1 1 1 0 L FBtr0087492 14496762 14497312 2R + 14497065 14497188 3'utr L FlyBase G15880.2 AAGTTTTCTTTCATTTTTTCGGATGATCTTCGATTGGAAATGTGTATTTTCTTCGTTCGACGAGTGTACGCCTATCATCGGCTGTTGCACATTGAGTTAACTAACTGATACTGATACTGATGAT 399 14497088 0.860283517 29 392 4025 0.985355649 2.195899652 0.462343096 0.155388471 0.294979079 399 5 2 471 2R:14497065-14497188 6 L FBtr0087492 14496762 14497312 TGATCT 6mer3-8 dme-bantam-3p 2R + 14497066 14497114 3'utr L FlyBase G12059.2 AGTTTTCTTTCATTTTTTCGGATGATCTTCGATTGGAAATGTGTATTTT 271 14497088 0.868710227 8 267 2754 0.984693878 2.586587305 0.538265306 0.346863469 0.548469388 271 6 0 386 2R:14497066-14497114 6 310.5 1370 FBgn0001332 330.9966667 15.39666667 23.77 0.938075912 20.16670275 13.06268406 0 0 0 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2R 14511339 14511345 + 2R_14511339_14511345_+ 0.521172164 0.521223658 0.521197911 3.64E-05 Asx FBtr0332930 14510482 14512493 2R + 14511312 14511391 3'utr Asx FlyBase G15903.1 CGGTGCGGCCAAGCTGTGTGTCGCCTGTGTGATTAGATGAGGTGGATAACGTTTTGTAGTTACTTAGAGACCCGTACTTT 16 14511345 0.982184086 8 16 120 1 1.278753601 0.578947368 0.1875 0.315789474 16 0 0 19 2R:14511312-14511391 7 Asx FBtr0332930 14510482 14512493 TGTGATT 7mer-m1 dme-miR-308-3p 2R + 14511322 14511396 3'utr Asx FlyBase G12078.1 AAGCTGTGTGTCGCCTGTGTGATTAGATGAGGTGGATAACGTTTTGTAGTTACTTAGAGACCCGTACTTTTAGTC 18 14511345 0.984486375 7 17 132 0.965517241 1.447158031 0.275862069 0.388888889 0.620689655 18 1 0 28 2R:14511322-14511396 7 13 1371 FBgn0261823 1306.773333 24.71666667 37.93 0.009948167 0.52596089 0.34273662 -6 -6 -6 0.01 dme-miR-282-5p 7mer-m8 AGAGGCT 2R 14511506 14511512 + 2R_14511506_14511512_+ 0.631524569 0.631524569 0.631524569 0 Asx FBtr0087493|FBtr0332929|FBtr0332930 14511350|14511350|14510482 14512493|14512493|14512493 2R + 14511411 14511529 3'utr Asx FlyBase G15904.1 GGTACCAACCAAATGTTTAAATTGTGAACTATAGCAATCAAAGAGAAATAGCAAAAACCAAGTGTACAACAAACAAATTAAAACAATGGACGTGCAGAGGCTTACGCACAGACACAGCA 46 14511513 0.91222081 8 43 143 0.964912281 1.740362689 0.157894737 0.152173913 0.315789474 46 2 0 55 2R:14511411-14511529 7 Asx FBtr0332929|FBtr0332930|FBtr0087493 14511350|14510482|14511350 14512493|14512493|14512493 AGAGGCT 7mer-m8 dme-miR-282-5p 2R + 14511485 14511529 3'utr Asx FlyBase G12080.1 AAATTAAAACAATGGACGTGCAGAGGCTTACGCACAGACACAGCA 31 14511513 0.875117946 2 30 81 0.978723404 1.662757832 0.191489362 0.322580645 0.553191489 31 1 0 46 2R:14511485-14511529 7 29.5 1372 FBgn0261823 1306.773333 24.71666667 37.93 0.022574688 1.193526635 0.777748484 -7 -7 -7 0.01 dme-miR-965-3p 6mer2-7 ACGCTT 2R 14512072 14512077 + 2R_14512072_14512077_+ 1 1 1 0 Asx FBtr0087493|FBtr0332929|FBtr0332930 14511350|14511350|14510482 14512493|14512493|14512493 2R + 14512052 14512097 3'utr Asx FlyBase G15909.1 ATTCATAATGTATTTTGAAAACGCTTTGGCCCAGCGCTTAGGCTAT 35 14512078 0.852684578 3 35 223 1 1.612783857 0.317073171 0.142857143 0.268292683 35 0 0 41 2R:14512052-14512097 6 Asx FBtr0332929|FBtr0332930|FBtr0087493 14511350|14510482|14511350 14512493|14512493|14512493 ACGCTT 6mer2-7 dme-miR-965-3p 2R + 14512052 14512098 3'utr Asx FlyBase G12082.1 ATTCATAATGTATTTTGAAAACGCTTTGGCCCAGCGCTTAGGCTATA 17 14512078 0.895086528 3 17 112 1 1.342422681 0.272727273 0.235294118 0.409090909 17 0 0 22 2R:14512052-14512098 6 24 1373 FBgn0261823 1306.773333 24.71666667 37.93 0.018365848 0.97100472 0.632744529 -6 -6 -6 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2R 14512142 14512147 + 2R_14512142_14512147_+ 1 1 1 0 Asx FBtr0087493|FBtr0332929|FBtr0332930 14511350|14511350|14510482 14512493|14512493|14512493 2R + 14512109 14512188 3'utr Asx FlyBase G15910.1 CTTTAAGTTTAGTATTATCCACCCAAACGATCTAAGACTCTTCATGCCCACATTTCTTTAGCATGTAGCGTATAAACGTA 29 14512149 0.751203212 9 27 182 0.970588235 1.51851394 0 0.172413793 0.294117647 29 1 0 33 2R:14512109-14512188 6 Asx FBtr0332929|FBtr0332930|FBtr0087493 14511350|14510482|14511350 14512493|14512493|14512493 AAGACT 6mer3-8 dme-miR-14-3p 2R + 14512109 14512180 3'utr Asx FlyBase G12083.1 CTTTAAGTTTAGTATTATCCACCCAAACGATCTAAGACTCTTCATGCCCACATTTCTTTAGCATGTAGCGTA 9 14512141 0.972481451 5 8 58 0.933333333 1.146128036 0.2 0.444444444 0.666666667 9 1 0 14 2R:14512109-14512180 6 13.5 1374 FBgn0261823 1306.773333 24.71666667 37.93 0.010330789 0.546190155 0.355918798 -7 1 -3 0.01 dme-miR-190-5p 6mer3-8 ACATAT 2R 14584274 14584279 + 2R_14584274_14584279_+ 1 1 1 0 ttv FBtr0087495|FBtr0333165|FBtr0333164 14584225|14584225|14584225 14585321|14585321|14587917 2R + 14584247 14584282 3'utr ttv FlyBase G15921.1 TAGCTACAAGCGTTAATAGTACTGAATACATATACA 12 14584263 0.679981291 6 10 69 0.857142857 1.079181246 0 0.166666667 0.285714286 12 2 0 12 2R:14584247-14584282 6 ttv FBtr0333164|FBtr0087495|FBtr0333165 14584225|14584225|14584225 14587917|14585321|14585321 ACATAT 6mer3-8 dme-miR-190-5p 2R + 14584247 14584283 3'utr ttv FlyBase G12092.1 TAGCTACAAGCGTTAATAGTACTGAATACATATACAC 9 14584265 0.948368118 4 8 58 0.933333333 1.146128036 0 0.555555556 0.733333333 9 1 0 14 2R:14584247-14584283 6 9.5 1375 FBgn0265974 763.1366667 22.67 34.72 0.012448622 0.419056021 0.273617512 11 9 10 0.01 dme-miR-13b-2-5p 8mer-m1 TTTGACGC 2R 14584400 14584407 + 2R_14584400_14584407_+ 0.618174508 0.618174508 0.618174508 0 ttv FBtr0087495|FBtr0333165|FBtr0333164 14584225|14584225|14584225 14585321|14585321|14587917 2R + 14584378 14584427 3'utr ttv FlyBase G15922.1 ATGTTTAGATGAAATGCTGTTTTTTGACGCTGGCCAAGCGATGCAAGAAC 12 14584401 0.727431545 6 11 89 0.933333333 1.146128036 0.4 0.166666667 0.333333333 12 1 0 14 2R:14584378-14584427 8 ttv FBtr0333164|FBtr0087495|FBtr0333165 14584225|14584225|14584225 14587917|14585321|14585321 TTTGACGC 8mer-m1 dme-miR-13b-2-5p 2R + 14584380 14584431 3'utr ttv FlyBase G12093.1 GTTTAGATGAAATGCTGTTTTTTGACGCTGGCCAAGCGATGCAAGAACTATG 12 14584392 0.974310119 6 12 89 1 1.255272505 0.611111111 0.25 0.5 12 0 0 18 2R:14584380-14584431 8 11.5 1376 FBgn0265974 763.1366667 22.67 34.72 0.015069385 0.507278341 0.331221198 -1 8 3.5 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 2R 14584581 14584586 + 2R_14584581_14584586_+ 1 1 1 0 ttv FBtr0087495|FBtr0333165|FBtr0333164 14584225|14584225|14584225 14585321|14585321|14587917 2R + 14584554 14584613 3'utr ttv FlyBase G15923.1 ATATATATATAGTCCTTAAATACGATTATGTGAATTAGCCTAGTTAACTGCAAGCGAAGC 35 14584588 0.949189658 4 35 267 1 1.591064607 0.153846154 0.114285714 0.205128205 35 0 0 39 2R:14584554-14584613 6 ttv FBtr0333164|FBtr0087495|FBtr0333165 14584225|14584225|14584225 14587917|14585321|14585321 ATGTGA 6mer3-8 dme-miR-1003-3p 2R + 14584568 14584609 3'utr ttv FlyBase G12095.1 CTTAAATACGATTATGTGAATTAGCCTAGTTAACTGCAAGCG 32 14584588 0.814204783 2 32 251 1 1.69019608 0.204081633 0.375 0.591836735 32 0 0 49 2R:14584568-14584609 6 32.5 1377 FBgn0265974 763.1366667 22.67 34.72 0.042587392 1.433612704 0.936059908 -7 -7 -7 0.01 dme-miR-282-5p 6mer2-7 GAGGCT 2R 14584872 14584877 + 2R_14584872_14584877_+ 1 1 1 0 ttv FBtr0087495|FBtr0333165|FBtr0333164 14584225|14584225|14584225 14585321|14585321|14587917 2R + 14584848 14584887 3'utr ttv FlyBase G15926.1 AATTTCAGTTTTAAATTCCAACTTGAGGCTCCTCGAATTC 23 14584871 0.845713383 2 22 152 0.925925926 0.920818754 0.185185185 0.173913043 0.296296296 23 0 2 25 2R:14584848-14584887 6 ttv FBtr0333164|FBtr0087495|FBtr0333165 14584225|14584225|14584225 14587917|14585321|14585321 GAGGCT 6mer2-7 dme-miR-282-5p 2R + 14584828 14584886 3'utr ttv FlyBase G12097.1 GCGCAAGGCACAGTCGTCTCAATTTCAGTTTTAAATTCCAACTTGAGGCTCCTCGAATT 19 14584871 0.973376014 4 19 114 1 1.491361694 0.096774194 0.473684211 0.677419355 19 0 0 31 2R:14584828-14584886 6 19.5 1378 FBgn0265974 763.1366667 22.67 34.72 0.025552435 0.860167622 0.561635945 1 1 1 0.01 dme-miR-980-5p 7mer-A1 AAAAACA 2R 14584894 14584900 + 2R_14584894_14584900_+ 0.782911824 0.782911824 0.782911824 0 ttv FBtr0087495|FBtr0333165|FBtr0333164 14584225|14584225|14584225 14585321|14585321|14587917 2R + 14584893 14584924 3'utr ttv FlyBase G15927.1 AAAAAACACATCGACTGTATCTTTTGATTATC 9 14584910 0.849963827 3 7 43 0.909090909 1 0 0.222222222 0.363636364 9 1 0 10 2R:14584893-14584924 7 ttv FBtr0333164|FBtr0087495|FBtr0333165 14584225|14584225|14584225 14587917|14585321|14585321 AAAAACA 7mer-A1 dme-miR-980-5p 2R + 14584887 14584921 3'utr ttv FlyBase G12098.1 CCGTATAAAAAACACATCGACTGTATCTTTTGATT 5 14584910 0.982313188 4 5 33 1 1 0.4 0.6 0.8 5 0 0 10 2R:14584887-14584921 7 6 1379 FBgn0265974 763.1366667 22.67 34.72 0.007862288 0.264666961 0.17281106 -16 -16 -16 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 14602127 14602133 - 2R_14602127_14602133_- 0.468719056 0.801970437 0.635344746 0.235644254 tra2 FBtr0089620|FBtr0089620|FBtr0089620|FBtr0089616|FBtr0089616|FBtr0089616|FBtr0089619|FBtr0089619|FBtr0089619|FBtr0089617|FBtr0089617|FBtr0089617|FBtr0089621|FBtr0089621|FBtr0089621|FBtr0089618|FBtr0089618|FBtr0089618|FBtr0089615|FBtr0089615|FBtr0089615 14602002|14602002|14602002|14602002|14602002|14602002|14602002|14602002|14602002|14602002|14602002|14602002|14602002|14602002|14602002|14602002|14602002|14602002|14602002|14602002|14602002 14602419|14602419|14602419|14602419|14602419|14602419|14602419|14602419|14602419|14602419|14602419|14602419|14602419|14602419|14602419|14602893|14602893|14602893|14602419|14602419|14602419 2R - 14602090 14602151 3'utr tra2 FlyBase G23322.1 ACAGAGGTCCGCATGGATTGTGATATGTATTTTAAAGGAACTGCAGCAAACTGATAATGATA 13 14602110 0.864576421 8 13 86 1 1.113943352 0.153846154 0 0 13 0 0 13 2R:14602090-14602151 7 tra2 FBtr0089621|FBtr0089621|FBtr0089621|FBtr0089618|FBtr0089618|FBtr0089618|FBtr0089615|FBtr0089615|FBtr0089615|FBtr0089620|FBtr0089620|FBtr0089620|FBtr0089616|FBtr0089616|FBtr0089616|FBtr0089619|FBtr0089619|FBtr0089619|FBtr0089617|FBtr0089617|FBtr0089617 14602002|14602002|14602002|14602002|14602002|14602002|14602002|14602002|14602002|14602002|14602002|14602002|14602002|14602002|14602002|14602002|14602002|14602002|14602002|14602002|14602002 14602419|14602419|14602419|14602893|14602893|14602893|14602419|14602419|14602419|14602419|14602419|14602419|14602419|14602419|14602419|14602419|14602419|14602419|14602419|14602419|14602419 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 14602093 14602150 3'utr tra2 FlyBase G17675.1 CAGAGGTCCGCATGGATTGTGATATGTATTTTAAAGGAACTGCAGCAAACTGATAATG 11 14602137 0.981566756 5 10 76 0.947368421 1.255272505 0.421052632 0.545454545 0.736842105 11 1 0 18 2R:14602093-14602150 7 8 1380 FBgn0003742 307.7 25.64 38.94 0.02599935 0.31201248 0.205444273 -23 4 -9.5 0.01 dme-miR-1002-5p 6mer3-8 CTACTT 2R 14602397 14602402 - 2R_14602397_14602402_- 0.999998265 0.999998229 0.999998247 7.07E-08 tra2 FBtr0089620|FBtr0089616|FBtr0089619|FBtr0089617|FBtr0089621|FBtr0089618|FBtr0089615 14602002|14602002|14602002|14602002|14602002|14602002|14602002 14602419|14602419|14602419|14602419|14602419|14602893|14602419 2R - 14602368 14602421 3'utr tra2 FlyBase G23324.1 AAAGCGCCTGGGGAGGAGGCTACTTCATTAACTCGTGCTCCTAAGTTCGCCCAA 17 14602394 0.713278414 4 15 99 0.944444444 1.230448921 0.055555556 0.058823529 0.111111111 17 1 0 17 2R:14602368-14602421 6 tra2 FBtr0089621|FBtr0089618|FBtr0089615|FBtr0089620|FBtr0089616|FBtr0089619|FBtr0089617 14602002|14602002|14602002|14602002|14602002|14602002|14602002 14602419|14602893|14602419|14602419|14602419|14602419|14602419 CTACTT 6mer3-8 dme-miR-1002-5p 2R - 14602369 14602422 3'utr tra2 FlyBase G17677.1 TAAAGCGCCTGGGGAGGAGGCTACTTCATTAACTCGTGCTCCTAAGTTCGCCCA 10 14602395 0.741184385 4 8 58 0.933333333 1.146128036 0 0.4 0.6 10 1 0 14 2R:14602369-14602422 6 8 1381 FBgn0003742 307.7 25.64 38.94 0.02599935 0.31201248 0.205444273 -8 -7 -7.5 0.01 dme-miR-980-3p 7mer-A1 GCAGCTA 2R 14760435 14760441 - 2R_14760435_14760441_- 0.823349562 0.823349562 0.823349562 0 Spred FBtr0329880 14759644 14761759 2R - 14760416 14760470 3'utr Spred FlyBase G23385.1 GTTTTCAAAAAGTCAACAAACTCATATATGCAGCTATATATATATATAAAAATAA 62 14760443 0.846923084 4 58 513 0.943661972 1.826074803 0.028169014 0.080645161 0.197183099 62 4 0 67 2R:14760416-14760470 7 Spred FBtr0329880 14759644 14761759 GCAGCTA 7mer-A1 dme-miR-980-3p 2R - 14760415 14760464 3'utr Spred FlyBase G17721.1 AAAAAGTCAACAAACTCATATATGCAGCTATATATATATATAAAAATAAT 31 14760443 0.827300942 3 30 258 0.954545455 1.62324929 0 0.322580645 0.522727273 31 2 0 42 2R:14760415-14760464 7 46.5 1382 FBgn0020767 764.69 30.76 47.25 0.060808955 1.511703511 0.984126984 2 2 2 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2R 14760846 14760852 - 2R_14760846_14760852_- 0.808818836 0.808818836 0.808818836 0 Spred FBtr0329880|FBtr0329880 14759644|14759644 14761759|14761759 2R - 14760833 14760872 3'utr Spred FlyBase G23386.1 TCGCTATGCTCGGCAATTGTTACTTAAATGTGCTTTAGTT 16 14760856 0.84422447 2 15 144 0.941176471 1.204119983 0.352941176 0.0625 0.117647059 16 1 0 16 2R:14760833-14760872 7 Spred FBtr0329880|FBtr0329880 14759644|14759644 14761759|14761759 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2R - 14760810 14760867 3'utr Spred FlyBase G17722.1 ATGCTCGGCAATTGTTACTTAAATGTGCTTTAGTTCAGAACTATGTACCCATTCGGTT 10 14760856 0.990263264 3 9 87 0.916666667 1.041392685 0.416666667 0.2 0.333333333 10 1 0 11 2R:14760810-14760867 7 12 1383 FBgn0020767 764.69 30.76 47.25 0.015692634 0.390117035 0.253968254 4 4 4 0.01 dme-miR-986-5p 6mer3-8 ATTCGA 2R 14761206 14761211 - 2R_14761206_14761211_- 0.999995502 0.999996739 0.99999612 8.49E-07 Spred FBtr0329880|FBtr0087468|FBtr0329879 14759644|14761154|14761154 14761759|14762038|14762038 2R - 14761180 14761226 3'utr Spred FlyBase G23387.1 ACTTGCTTGTTTACAATTCGAAATTGGAGAACAGTATTAAAAGGCCA 6 14761203 0.975110902 2 4 29 0.833333333 0.698970004 0 0 0 6 1 0 5 2R:14761180-14761226 6 Spred FBtr0329879|FBtr0087468|FBtr0329880 14761154|14761154|14759644 14762038|14762038|14761759 ATTCGA 6mer3-8 dme-miR-986-5p 2R - 14761175 14761212 3'utr Spred FlyBase G17723.1 AATTCGAAATTGGAGAACAGTATTAAAAGGCCAAGGCG 6 14761203 0.946932986 2 6 28 1 1.041392685 0.181818182 0.833333333 0.909090909 6 0 0 11 2R:14761175-14761212 6 3 1384 FBgn0020767 764.69 30.76 47.25 0.003923158 0.097529259 0.063492063 -8 -8 -8 0.01 dme-miR-980-5p 6mer2-7 AAAAAC 2R 14761334 14761339 - 2R_14761334_14761339_- 1 1 1 0 Spred FBtr0329880|FBtr0087468|FBtr0329879 14759644|14761154|14761154 14761759|14762038|14762038 2R - 14761320 14761356 3'utr Spred FlyBase G23388.1 CTTAATTATAGTTTTGTAAAAACGGGCTATTTGTTTT 5 14761343 0.96429907 3 5 47 1 0.84509804 0.428571429 0.2 0.428571429 5 0 0 7 2R:14761320-14761356 6 Spred FBtr0329879|FBtr0087468|FBtr0329880 14761154|14761154|14759644 14762038|14762038|14761759 AAAAAC 6mer2-7 dme-miR-980-5p 2R - 14761324 14761348 3'utr Spred FlyBase G17724.1 TAGTTTTGTAAAAACGGGCTATTTG 6 14761343 0.550193491 4 6 43 1 1 0.1 0.5 0.7 6 0 0 10 2R:14761324-14761348 6 5 1385 FBgn0020767 764.69 30.76 47.25 0.006538597 0.162548765 0.105820106 4 4 4 0.01 dme-miR-1006-3p 6mer3-8 CGAATT 2R 14761980 14761985 - 2R_14761980_14761985_- 1 1 1 0 Spred FBtr0087468|FBtr0329879 14761154|14761154 14762038|14762038 2R - 14761923 14762003 3'utr Spred FlyBase G23392.1 TGACCCCAGGCCCAGAAGCGAATTCCACTACCACCACTCCGAGCAGAGCATAATGAACAGCGCCAAGCGTCCGTGGGGCGC 7 14761981 0.836299419 2 6 16 1 0.84509804 0.571428571 0 0 7 0 0 7 2R:14761923-14762003 6 Spred FBtr0329879|FBtr0087468 14761154|14761154 14762038|14762038 CGAATT 6mer3-8 dme-miR-1006-3p 2R - 14761930 14762014 3'utr Spred FlyBase G17726.1 CAGCACGATGATGACCCCAGGCCCAGAAGCGAATTCCACTACCACCACTCCGAGCAGAGCATAATGAACAGCGCCAAGCGTCCGT 10 14761981 0.949132267 6 9 16 1 1.113943352 0.384615385 0.2 0.384615385 10 0 0 13 2R:14761930-14762014 6 3.5 1386 FBgn0020767 764.69 30.76 47.25 0.004577018 0.113784135 0.074074074 -4 -4 -4 0.01 dme-miR-2535b-3p 6mer3-8 CCGTGA 2R 14846178 14846183 - 2R_14846178_14846183_- 1 1 1 0 CG10209 FBtr0329883|FBtr0087462 14846062|14846062 14846330|14846417 2R - 14846151 14846200 3'utr CG10209 FlyBase G23400.1 TTTGTAGTAAGTGGATGCCGTGATCCTCATGTAAATGTTCCCGTGGCAAT 26 14846180 0.809774592 4 26 159 1 1.447158031 0.25 0.038461538 0.107142857 26 0 0 28 2R:14846151-14846200 6 CG10209 FBtr0087462|FBtr0329883 14846062|14846062 14846417|14846330 CCGTGA 6mer3-8 dme-miR-2535b-3p 2R - 14846103 14846200 3'utr CG10209 FlyBase G17730.1 TTTGTAGTAAGTGGATGCCGTGATCCTCATGTAAATGTTCCCGTGGCAATAACAGCGTAGCTCAACTGTGACTCAAGTTCTCAATAGATCGCGACGCA 26 14846181 0.980763921 7 24 166 0.953488372 1.612783857 0.162790698 0.538461538 0.720930233 26 2 0 41 2R:14846103-14846200 6 20.5 1387 FBgn0033971 206.33 12.39 18.95 0.099355402 1.654560129 1.081794195 -3 -2 -2.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2R 14857343 14857350 + 2R_14857343_14857350_+ 0.63113665 0.63113665 0.63113665 0 HPS1 FBtr0087449 14857301 14857502 2R + 14857330 14857369 3'utr HPS1 FlyBase G15977.1 TTATAACATGATTTCTAGTCAATTTTCGAGACTCCTAGGC 66 14857342 0.719346163 5 64 592 0.988095238 1.919078092 0 0.196969697 0.369047619 66 1 0 83 2R:14857330-14857369 8 HPS1 FBtr0087449 14857301 14857502 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R + 14857330 14857372 3'utr HPS1 FlyBase G12133.1 TTATAACATGATTTCTAGTCAATTTTCGAGACTCCTAGGCGAG 50 14857342 0.73809567 6 48 461 0.985915493 1.84509804 0.056338028 0.32 0.521126761 50 1 0 70 2R:14857330-14857372 8 57 1388 FBgn0033973 78.66666667 4.6 7.043333333 0.724576271 12.39130435 8.09275911 1 1 1 0.01 dme-miR-8-3p 8mer-A1 CAGTATTA 2R 14867118 14867125 - 2R_14867118_14867125_- 0.671698124 0.671698124 0.671698124 0 Inr-a FBtr0301513 14866611 14867304 2R - 14867102 14867147 3'utr Inr-a FlyBase G23449.1 TGGTTATAAAAGCGACCATTGCCAGTATTACTTACTGATCAACATT 49 14867128 0.836142673 4 47 311 0.981132075 1.716003344 0.150943396 0.081632653 0.150943396 49 1 0 52 2R:14867102-14867147 8 Inr-a FBtr0301513 14866611 14867304 CAGTATTA 8mer-A1 dme-miR-8-3p 2R - 14867082 14867151 3'utr Inr-a FlyBase G17766.1 GAGATGGTTATAAAAGCGACCATTGCCAGTATTACTTACTGATCAACATTATTGACAAAGATGTCTATAA 47 14867128 0.975054819 2 47 300 1 1.897627091 0.202531646 0.489361702 0.696202532 47 0 0 79 2R:14867082-14867151 8 46 1389 FBgn0264962 1522.043333 60.58 92.41666667 0.03022253 0.75932651 0.497745717 3 3 3 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2R 14867262 14867269 - 2R_14867262_14867269_- 0.595354748 0.586256447 0.590805598 0.00643347 Inr-a FBtr0301513|FBtr0301513|FBtr0301513 14866611|14866611|14866611 14867304|14867304|14867304 2R - 14867175 14867375 stop_codon Inr-a FlyBase G23450.1 TCAACCAGAATGGCGGCACTCGATGGCTTAGGTTGGTGGAAGGGCGGGTTATTGGGACCGTATGTGGTTGACAAGTGGAAATCTTCTGCTCAACTCTAACCGAAGTCTGTGATAAGTACAATTGTGATACCAAAGTGGCGTTCCCAACAATGGAATGTGTTAAACTATAGATTTTGCTTGAATTCTGATAAATATCATATT 139 14867270 0.979531721 25 131 906 0.955307263 1.630936119 0.094972067 0.223021583 0.396648045 139 5 3 171 2R:14867175-14867375 8 Inr-a FBtr0301513|FBtr0301513|FBtr0301513 14866611|14866611|14866611 14867304|14867304|14867304 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 14867196 14867324 stop_codon Inr-a FlyBase G17767.1 TTGGGACCGTATGTGGTTGACAAGTGGAAATCTTCTGCTCAACTCTAACCGAAGTCTGTGATAAGTACAATTGTGATACCAAAGTGGCGTTCCCAACAATGGAATGTGTTAAACTATAGATTTTGCTTG 110 14867270 0.85805092 18 98 710 0.887573964 1.477121255 0.147928994 0.409090909 0.615384615 110 15 4 150 2R:14867196-14867324 8 82 1390 FBgn0264962 1522.043333 60.58 92.41666667 0.053874944 1.35358204 0.887285843 1 1 1 0.01 dme-miR-1007-3p 6mer3-8 TGAGCT 2R 14901679 14901684 - 2R_14901679_14901684_- 0.991087681 1 0.995543841 0.006301948 CG10249 FBtr0303758|FBtr0112929|FBtr0087429|FBtr0303757|FBtr0332856|FBtr0087430|FBtr0301334|FBtr0303756|FBtr0087431 14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473 14901972|14901972|14901972|14901972|14901972|14901972|14902362|14901972|14901972 2R - 14901652 14901731 3'utr CG10249 FlyBase G23465.1 TGAGACACATCGATCAACTAATGCAATTAAGTACTACTGCACAGGCCTGAGCTACCGATCTTAAAGTAGCCGACAAACCA 32 14901694 0.952747833 9 29 153 0.918918919 1.230448921 0.135135135 0.15625 0.27027027 32 2 1 34 2R:14901652-14901731 6 CG10249 FBtr0303757|FBtr0087429|FBtr0112929|FBtr0303758|FBtr0087431|FBtr0303756|FBtr0087430|FBtr0301334|FBtr0332856 14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473 14901972|14901972|14901972|14901972|14901972|14901972|14901972|14902362|14901972 TGAGCT 6mer3-8 dme-miR-1007-3p 2R - 14901658 14901749 3'utr CG10249 FlyBase G17780.1 AACTCTGTGTAATCATTCTGAGACACATCGATCAACTAATGCAATTAAGTACTACTGCACAGGCCTGAGCTACCGATCTTAAAGTAGCCGAC 22 14901680 0.935827302 11 18 99 0.9375 1.176091259 0.1875 0.363636364 0.5625 22 1 1 30 2R:14901658-14901749 6 13.5 1391 FBgn0027596 1054.266667 34.76666667 52.75333333 0.012805109 0.388302972 0.255907999 10 -4 3 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT 2R 14901846 14901852 - 2R_14901846_14901852_- 0.658999527 0.658999527 0.658999527 0 CG10249 FBtr0303758|FBtr0112929|FBtr0087429|FBtr0303757|FBtr0332856|FBtr0087430|FBtr0301334|FBtr0303756|FBtr0087431 14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473 14901972|14901972|14901972|14901972|14901972|14901972|14902362|14901972|14901972 2R - 14901805 14901924 3'utr CG10249 FlyBase G23467.1 AAGATTTAAATTAGCATTTCGTAGAGCTGCTCAGAATACATTCCATACCGCCATACTGCGGAAAGGCACAAGGGCAGCTTACACTTTTCATATGTATATTGTATAACTAGAATTCGTTTG 47 14901845 0.787507029 17 42 337 0.927272727 1.707570176 0.145454545 0.14893617 0.272727273 47 4 0 51 2R:14901805-14901924 7 CG10249 FBtr0303757|FBtr0087429|FBtr0112929|FBtr0303758|FBtr0087431|FBtr0303756|FBtr0087430|FBtr0301334|FBtr0332856 14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473 14901972|14901972|14901972|14901972|14901972|14901972|14901972|14902362|14901972 GGCAGCT 7mer-m8 dme-miR-980-3p 2R - 14901812 14901979 stop_codon CG10249 FlyBase G17781.1 GCAGTAAAGCCATTTCGTATTAGCGGCCAAATCGACGAACAAACAGCTAGTGACTAAGATTTAAATTAGCATTTCGTAGAGCTGCTCAGAATACATTCCATACCGCCATACTGCGGAAAGGCACAAGGGCAGCTTACACTTTTCATATGTATATTGTATAACTAGAAT 41 14901845 0.976038614 14 36 208 0.90625 1.462397998 0.125 0.43902439 0.640625 41 5 1 58 2R:14901812-14901979 7 15.5 1392 FBgn0027596 1054.266667 34.76666667 52.75333333 0.014702163 0.445829338 0.293820296 -7 -7 -7 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 2R 14939139 14939145 + 2R_14939139_14939145_+ 0.620204266 0.620204266 0.620204266 0 Lap1 FBtr0087407|FBtr0303759 14939080|14939080 14940722|14939959 2R + 14939055 14939147 stop_codon Lap1 FlyBase G16002.1 ATGAACATAATGTTGTCGAGAAAATGATGGACCATCTATTTACCGACCTAAGCCGATTCCCATCCCGAGACCGAAGACTTTTTGTGCATTTTT 91 14939135 0.968072193 13 89 470 0.990909091 2.037426498 0.472727273 0.175824176 0.318181818 91 1 0 109 2R:14939055-14939147 7 Lap1 FBtr0087407|FBtr0303759 14939080|14939080 14940722|14939959 TGCATTT 7mer-m8 dme-miR-277-3p 2R + 14939095 14939152 3'utr Lap1 FlyBase G12147.1 TACCGACCTAAGCCGATTCCCATCCCGAGACCGAAGACTTTTTGTGCATTTTTCTAAC 66 14939135 0.701910176 8 59 330 0.914893617 1.457377197 0.478723404 0.318181818 0.521276596 66 6 2 86 2R:14939095-14939152 7 38.5 1393 FBgn0033984 772.6433333 22.73333333 35.04666667 0.049828942 1.693548387 1.098535286 4 4 4 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 2R 14945465 14945470 - 2R_14945465_14945470_- 0.985332723 1 0.992666361 0.010371347 aPKC FBtr0329887|FBtr0329890|FBtr0303431|FBtr0329888|FBtr0303433|FBtr0329889 14945112|14945112|14945112|14945112|14945112|14945112 14946515|14946046|14946515|14946515|14946515|14946063 2R - 14945431 14945490 3'utr aPKC FlyBase G23483.1 ACTCTAATGTAAAATGTGTGTGTGTTAGTATTAGAGAGCAGAGCATGGTTTTTAAAGGCG 10 14945476 0.960664226 5 8 79 0.916666667 1.041392685 0.5 0.1 0.25 10 1 0 11 2R:14945431-14945490 6 aPKC FBtr0329890|FBtr0303431|FBtr0303433|FBtr0329888|FBtr0329889|FBtr0329887 14945112|14945112|14945112|14945112|14945112|14945112 14946046|14946515|14946515|14946515|14946063|14946515 TGTGTT 6mer3-8 dme-miR-317-3p 2R - 14945444 14945485 3'utr aPKC FlyBase G17795.1 AATGTAAAATGTGTGTGTGTTAGTATTAGAGAGCAGAGCATG 5 14945475 0.989935165 4 4 40 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 2R:14945444-14945485 6 5.5 1394 FBgn0261854 1305.743333 49.00666667 75.25333333 0.00421216 0.112229629 0.073086464 6 5 5.5 0.01 dme-miR-33-5p 8mer-A1 CAATGCAA 2R 14945723 14945730 - 2R_14945723_14945730_- 0.634540764 0.555926145 0.595233454 0.055588987 aPKC FBtr0329887|FBtr0329890|FBtr0303431|FBtr0329888|FBtr0303433|FBtr0329889 14945112|14945112|14945112|14945112|14945112|14945112 14946515|14946046|14946515|14946515|14946515|14946063 2R - 14945681 14945745 3'utr aPKC FlyBase G23485.1 AACCATTTCAAAACTCAATGCAAGACTTTTCACCAAGAAACTTAGGGGTTTGACGATCCCGCGAG 42 14945717 0.97226582 5 39 232 0.941176471 1.681241237 0.019607843 0.119047619 0.274509804 42 3 0 48 2R:14945681-14945745 8 aPKC FBtr0329890|FBtr0303431|FBtr0303433|FBtr0329888|FBtr0329889|FBtr0329887 14945112|14945112|14945112|14945112|14945112|14945112 14946046|14946515|14946515|14946515|14946063|14946515 CAATGCAA 8mer-A1 dme-miR-33-5p 2R - 14945703 14945772 3'utr aPKC FlyBase G17796.1 AGGCGAACTTTATGCAAGCAAAAGATAAACCATTTCAAAACTCAATGCAAGACTTTTCACCAAGAAACTT 35 14945717 0.885558642 6 34 172 0.979591837 1.681241237 0.040816327 0.285714286 0.489795918 35 1 0 48 2R:14945703-14945772 8 35 1395 FBgn0261854 1305.743333 49.00666667 75.25333333 0.026804655 0.714188546 0.465095677 -13 -13 -13 0.01 dme-miR-318-3p 7mer-A1 CCAGTGA 2R 14946395 14946401 - 2R_14946395_14946401_- 0.823349562 0.823349562 0.823349562 0 aPKC FBtr0329887|FBtr0303429|FBtr0303430|FBtr0303437|FBtr0303434|FBtr0303435|FBtr0303431|FBtr0329888|FBtr0303433|FBtr0303432 14945112|14946104|14946104|14946104|14944456|14946104|14945112|14945112|14945112|14946104 14946515|14946515|14946515|14946776|14946515|14946515|14946515|14946515|14946515|14946515 2R - 14946360 14946412 3'utr aPKC FlyBase G23486.1 TGGCGAGGATTCCAGTGATTACGATTCCGTGGCTGACGATTTGAGTCTCCTGC 12 14946390 0.688360049 5 12 88 1 1.146128036 0.357142857 0.083333333 0.214285714 12 0 0 14 2R:14946360-14946412 7 aPKC FBtr0303434|FBtr0303432|FBtr0303431|FBtr0303435|FBtr0303433|FBtr0329888|FBtr0329887|FBtr0303429|FBtr0303430|FBtr0303437 14944456|14946104|14945112|14946104|14945112|14945112|14945112|14946104|14946104|14946104 14946515|14946515|14946515|14946515|14946515|14946515|14946515|14946515|14946515|14946776 CCAGTGA 7mer-A1 dme-miR-318-3p 2R - 14946361 14946411 3'utr aPKC FlyBase G17797.1 GGCGAGGATTCCAGTGATTACGATTCCGTGGCTGACGATTTGAGTCTCCTG 7 14946392 0.975518432 4 7 44 1 1.079181246 0.583333333 0.571428571 0.75 7 0 0 12 2R:14946361-14946411 7 8 1396 FBgn0261854 1305.743333 49.00666667 75.25333333 0.006126778 0.163243096 0.106307583 -11 -9 -10 0.01 dme-bantam-3p 7mer-A1 GATCTCA 2R 15142987 15142993 + 2R_15142987_15142993_+ 0.823349562 0.823349562 0.823349562 0 chn FBtr0305217 15140383 15143633 2R + 15142975 15143012 3'utr chn FlyBase G16024.1 AAACGGCAGTTGGATCTCAGCACACCTCGTCGGAGTCC 11 15142984 0.827527859 2 10 43 0.928571429 1.113943352 0 0.272727273 0.428571429 11 1 0 13 2R:15142975-15143012 7 chn FBtr0305217 15140383 15143633 GATCTCA 7mer-A1 dme-bantam-3p 2R + 15142975 15143012 3'utr chn FlyBase G12169.1 AAACGGCAGTTGGATCTCAGCACACCTCGTCGGAGTCC 9 15142985 0.850944964 3 8 38 0.9375 1.176091259 0 0.555555556 0.75 9 1 0 15 2R:15142975-15143012 7 10 1397 FBgn0015371 413.87 9.896666667 15.28666667 0.024162177 1.010441226 0.65416485 3 2 2.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 2R 15143592 15143599 + 2R_15143592_15143599_+ 0.674982063 0.674982063 0.674982063 0 chn FBtr0305217|FBtr0305214|FBtr0111006|FBtr0305213|FBtr0087415|FBtr0305215|FBtr0087416|FBtr0305216 15140383|15143450|15143450|15143450|15143450|15143450|15143450|15143450 15143633|15144783|15143633|15144783|15144783|15144783|15143633|15144783 2R + 15143549 15143617 3'utr chn FlyBase G16025.1 ATTTAAAAAATTGCATTTAATTTTTTAAATTTTAAGTTGTGATGTACCTGAAATATGATTTCTCTTAAA 365 15143591 0.848455508 6 359 2596 0.987288136 2.668385917 0.006355932 0.235616438 0.408898305 365 6 0 466 2R:15143549-15143617 8 chn FBtr0087416|FBtr0305216|FBtr0087415|FBtr0305215|FBtr0111006|FBtr0305213|FBtr0305217|FBtr0305214 15143450|15143450|15143450|15143450|15143450|15143450|15140383|15143450 15143633|15144783|15144783|15144783|15143633|15144783|15143633|15144783 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2R + 15143549 15143619 3'utr chn FlyBase G12170.1 ATTTAAAAAATTGCATTTAATTTTTTAAATTTTAAGTTGTGATGTACCTGAAATATGATTTCTCTTAAACA 276 15143591 0.957782997 6 275 1914 0.997487437 2.598790507 0.005025126 0.358695652 0.555276382 276 1 0 397 2R:15143549-15143619 8 316 1398 FBgn0015371 413.87 9.896666667 15.28666667 0.763524778 31.92994274 20.67160925 1 1 1 0.01 dme-miR-283-5p 8mer-m1 TGATATTT 2R 15204187 15204194 + 2R_15204187_15204194_+ 0.555593841 0.555593841 0.555593841 0 CG11807 FBtr0087363|FBtr0310139 15204105|15204105 15204466|15204466 2R + 15204172 15204212 3'utr CG11807 FlyBase G16044.1 ATAAGTATTGCCTATTGATATTTCTTGCAACTAAACCCTAT 15 15204186 0.754482161 4 13 155 0.882352941 1.176091259 0.117647059 0.133333333 0.235294118 15 2 0 15 2R:15204172-15204212 8 CG11807 FBtr0310139|FBtr0087363 15204105|15204105 15204466|15204466 TGATATTT 8mer-m1 dme-miR-283-5p 2R + 15204170 15204200 3'utr CG11807 FlyBase G12180.1 TTATAAGTATTGCCTATTGATATTTCTTGCA 7 15204186 0.772898109 2 7 82 1 0.954242509 0.333333333 0.285714286 0.444444444 7 0 0 9 2R:15204170-15204200 8 11 1399 FBgn0033996 352.6333333 22.09 33.89 0.031193875 0.497962879 0.324579522 1 1 1 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 2R 15206886 15206891 - 2R_15206886_15206891_- 1 1 1 0 row FBtr0087402 15206525 15206949 2R - 15206881 15206931 stop_codon row FlyBase G23525.2 CTCAAATCACGCGACTATACCCTTCACTGGCAGAACTATTAGTTAAAGTTC 201 15206904 0.852814722 12 161 1631 0.803571429 1.301029996 0.544642857 0.109452736 0.200892857 201 36 8 180 2R:15206881-15206931 6 row FBtr0087402 15206525 15206949 AGTTAA 6mer3-8 dme-miR-999-3p 2R - 15206846 15206929 stop_codon row FlyBase G17822.1 CAAATCACGCGACTATACCCTTCACTGGCAGAACTATTAGTTAAAGTTCATTCATATTCATCGCACATTGGCCATATCCCGAAT 135 15206904 0.989251937 11 111 1064 0.835748792 1.459894853 0.570048309 0.348148148 0.574879227 135 29 5 173 2R:15206846-15206929 6 96 1400 FBgn0033998 1573.363333 48.92333333 74.57333333 0.061015786 1.962253867 1.28732344 13 13 13 0.01 dme-miR-2535b-3p 6mer3-8 CCGTGA 2R 15211531 15211536 - 2R_15211531_15211536_- 1 1 1 0 row FBtr0087403 15211243 15211571 2R - 15211519 15211549 3'utr row FlyBase G23543.1 GTTTTTATTTAGGCCGTGAATAGAATAGTGC 9 15211542 0.689304339 3 9 81 1 1.041392685 0.090909091 0.222222222 0.363636364 9 0 0 11 2R:15211519-15211549 6 row FBtr0087403 15211243 15211571 CCGTGA 6mer3-8 dme-miR-2535b-3p 2R - 15211516 15211551 3'utr row FlyBase G17835.1 AAGTTTTTATTTAGGCCGTGAATAGAATAGTGCGTT 8 15211541 0.694719022 4 8 74 1 1.041392685 0.090909091 0.375 0.545454545 8 0 0 11 2R:15211516-15211551 6 8.5 1401 FBgn0033998 1573.363333 48.92333333 74.57333333 0.005402439 0.173741228 0.113981763 6 5 5.5 0.01 dme-bantam-3p 6mer2-7 GATCTC 2R 15222769 15222774 + 2R_15222769_15222774_+ 1 1 1 0 CG8079 FBtr0339995|FBtr0339994 15222101|15222101 15223671|15223671 2R + 15222738 15222779 3'utr CG8079 FlyBase G16051.1 CAATGGATCCCCAATGTCCAGCGACGCCATGGATCTCGTTCA 7 15222767 0.963412443 3 7 35 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 2R:15222738-15222779 6 CG8079 FBtr0339995|FBtr0339994 15222101|15222101 15223671|15223671 GATCTC 6mer2-7 dme-bantam-3p 2R + 15222751 15222786 3'utr CG8079 FlyBase G12187.1 ATGTCCAGCGACGCCATGGATCTCGTTCACGGCAGT 12 15222767 0.959183692 2 11 56 0.947368421 1.255272505 0.210526316 0.5 0.684210526 12 1 0 18 2R:15222751-15222786 6 9 1402 FBgn0034002 425.32 23.75 36.47 0.021160538 0.378947368 0.246778174 2 2 2 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2R 15258356 15258361 + 2R_15258356_15258361_+ 1 1 1 0 scb FBtr0087369|FBtr0087370 15257714|15257714 15258498|15258498 2R + 15258326 15258366 3'utr scb FlyBase G16057.1 TTGTAAAGGTAGCTTTACAGGGCGACGTGAAAGACTTTATT 23 15258363 0.94031095 3 23 140 1 1.477121255 0.133333333 0.217391304 0.4 23 0 0 30 2R:15258326-15258366 6 scb FBtr0087369|FBtr0087370 15257714|15257714 15258498|15258498 AAGACT 6mer3-8 dme-miR-14-3p 2R + 15258322 15258371 3'utr scb FlyBase G12190.1 AAATTTGTAAAGGTAGCTTTACAGGGCGACGTGAAAGACTTTATTAATGT 12 15258364 0.969296591 6 12 70 1 1.204119983 0.0625 0.25 0.4375 12 0 0 16 2R:15258322-15258371 6 15 1403 FBgn0003328 302.4766667 8.453333333 13.12333333 0.049590602 1.77444795 1.143002286 -7 -8 -7.5 0.01 dme-miR-252-5p 7mer-m8 GTACTTA 2R 15262867 15262873 - 2R_15262867_15262873_- 0.588299917 0.588299917 0.588299917 0 Trpm FBtr0339080|FBtr0339082|FBtr0339077|FBtr0339079|FBtr0339074|FBtr0339081|FBtr0339078|FBtr0339076 15262806|15262806|15262806|15262806|15262806|15262806|15262806|15262806 15263722|15263722|15263722|15263722|15263722|15263722|15263722|15263722 2R - 15262850 15262977 3'utr Trpm FlyBase G23564.1 AAATTGTTCATGTTTGGCCAATGTGTGCTAGTAACTTAAATTAGATTTTTAAATATTTTCAAGGATTAAGAATAACAATGCATTTTAATAAAATATTTATGATTGTACTTATTTATGTTAAGAATTGT 61 15262874 0.89564363 13 58 592 0.945205479 1.537819095 0.068493151 0.180327869 0.315068493 61 3 1 69 2R:15262850-15262977 7 Trpm FBtr0339074|FBtr0339081|FBtr0339078|FBtr0339076|FBtr0339080|FBtr0339077|FBtr0339082|FBtr0339079 15262806|15262806|15262806|15262806|15262806|15262806|15262806|15262806 15263722|15263722|15263722|15263722|15263722|15263722|15263722|15263722 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 15262852 15262915 3'utr Trpm FlyBase G17844.1 GGATTAAGAATAACAATGCATTTTAATAAAATATTTATGATTGTACTTATTTATGTTAAGAATT 26 15262874 0.798963332 8 26 242 1 1.591064607 0.128205128 0.461538462 0.641025641 26 0 0 39 2R:15262852-15262915 7 17 1404 FBgn0265194 654.6833333 11.36 17.34333333 0.025966752 1.496478873 0.980203729 1 1 1 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 2R 15262893 15262899 - 2R_15262893_15262899_- 0.620203699 0.620199422 0.62020156 3.04E-06 Trpm FBtr0339080|FBtr0339082|FBtr0339077|FBtr0339079|FBtr0339074|FBtr0339081|FBtr0339078|FBtr0339076 15262806|15262806|15262806|15262806|15262806|15262806|15262806|15262806 15263722|15263722|15263722|15263722|15263722|15263722|15263722|15263722 2R - 15262850 15262977 3'utr Trpm FlyBase G23564.1 AAATTGTTCATGTTTGGCCAATGTGTGCTAGTAACTTAAATTAGATTTTTAAATATTTTCAAGGATTAAGAATAACAATGCATTTTAATAAAATATTTATGATTGTACTTATTTATGTTAAGAATTGT 61 15262874 0.89564363 13 58 592 0.945205479 1.537819095 0.068493151 0.180327869 0.315068493 61 3 1 69 2R:15262850-15262977 7 Trpm FBtr0339074|FBtr0339081|FBtr0339078|FBtr0339076|FBtr0339080|FBtr0339077|FBtr0339082|FBtr0339079 15262806|15262806|15262806|15262806|15262806|15262806|15262806|15262806 15263722|15263722|15263722|15263722|15263722|15263722|15263722|15263722 TGCATTT 7mer-m8 dme-miR-277-3p 2R - 15262852 15262915 3'utr Trpm FlyBase G17844.1 GGATTAAGAATAACAATGCATTTTAATAAAATATTTATGATTGTACTTATTTATGTTAAGAATT 26 15262874 0.798963332 8 26 242 1 1.591064607 0.128205128 0.461538462 0.641025641 26 0 0 39 2R:15262852-15262915 7 14 1405 FBgn0265194 654.6833333 11.36 17.34333333 0.021384384 1.232394366 0.8072266 -25 -25 -25 0.01 dme-miR-980-3p 6mer2-7 GCAGCT 2R 15263210 15263215 - 2R_15263210_15263215_- 1 0.999854191 0.999927095 0.000103096 Trpm FBtr0339080|FBtr0339082|FBtr0339077|FBtr0339079|FBtr0339074|FBtr0339081|FBtr0339078|FBtr0339076 15262806|15262806|15262806|15262806|15262806|15262806|15262806|15262806 15263722|15263722|15263722|15263722|15263722|15263722|15263722|15263722 2R - 15263185 15263242 3'utr Trpm FlyBase G23566.1 TTACCTCAGCTCAATTAGAAACCTATCGCAGCTCAATGTACTTTATGCCTGTCCCTGT 59 15263217 0.833470585 8 55 324 0.935897436 1.386201605 0.064102564 0.305084746 0.474358974 59 3 2 73 2R:15263185-15263242 6 Trpm FBtr0339074|FBtr0339081|FBtr0339078|FBtr0339076|FBtr0339080|FBtr0339077|FBtr0339082|FBtr0339079 15262806|15262806|15262806|15262806|15262806|15262806|15262806|15262806 15263722|15263722|15263722|15263722|15263722|15263722|15263722|15263722 GCAGCT 6mer2-7 dme-miR-980-3p 2R - 15263177 15263228 3'utr Trpm FlyBase G17846.1 TTAGAAACCTATCGCAGCTCAATGTACTTTATGCCTGTCCCTGTCGGAGTTC 31 15263206 0.718915996 5 30 165 0.976190476 1.612783857 0.119047619 0.322580645 0.5 31 1 0 41 2R:15263177-15263228 6 37.5 1406 FBgn0265194 654.6833333 11.36 17.34333333 0.057279601 3.301056338 2.162214107 2 -9 -3.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2R 15263656 15263662 - 2R_15263656_15263662_- 0.823349562 0.823349562 0.823349562 0 Trpm FBtr0339080|FBtr0339082|FBtr0339077|FBtr0339079|FBtr0339074|FBtr0339081|FBtr0339078|FBtr0339076 15262806|15262806|15262806|15262806|15262806|15262806|15262806|15262806 15263722|15263722|15263722|15263722|15263722|15263722|15263722|15263722 2R - 15263634 15263681 3'utr Trpm FlyBase G23567.1 ACTGTGCTCAATGGGAAAACTAGTCATAAGAGTGGGGTGATAAATAAG 20 15263655 0.780136088 5 19 91 0.954545455 1.322219295 0.363636364 0.05 0.136363636 20 1 0 21 2R:15263634-15263681 7 Trpm FBtr0339074|FBtr0339081|FBtr0339078|FBtr0339076|FBtr0339080|FBtr0339077|FBtr0339082|FBtr0339079 15262806|15262806|15262806|15262806|15262806|15262806|15262806|15262806 15263722|15263722|15263722|15263722|15263722|15263722|15263722|15263722 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R - 15263613 15263713 3'utr Trpm FlyBase G17847.1 AGGCCGACGAAAATGGATCGTGTGTGTCCCACACTGTGCTCAATGGGAAAACTAGTCATAAGAGTGGGGTGATAAATAAGTTGTTGAACTAGCGTTGGGAT 20 15263655 0.957283412 7 18 91 0.884615385 1.361727836 0.269230769 0.25 0.423076923 20 3 0 23 2R:15263613-15263713 7 17 1407 FBgn0265194 654.6833333 11.36 17.34333333 0.025966752 1.496478873 0.980203729 -7 -7 -7 0.01 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2R 15266558 15266563 - 2R_15266558_15266563_- 1 1 1 0 Trpm FBtr0339075 15266379 15267776 2R - 15266540 15266582 3'utr Trpm FlyBase G23572.1 TGCTTTAGCTTCTAGGCTCTTTGACATCAGTAATATTATATAT 17 15266562 0.720090845 5 16 151 1 1.255272505 0.111111111 0.058823529 0.111111111 17 0 0 18 2R:15266540-15266582 6 Trpm FBtr0339075 15266379 15267776 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2R - 15266508 15266585 3'utr Trpm FlyBase G17849.1 ACATGCTTTAGCTTCTAGGCTCTTTGACATCAGTAATATTATATATTTTGCAGACTCTCTTTTAATTATTTTTAAACC 8 15266562 0.984523894 4 8 73 1 1.079181246 0.25 0.375 0.583333333 8 0 0 12 2R:15266508-15266585 6 9.5 1408 FBgn0265194 654.6833333 11.36 17.34333333 0.014510832 0.836267606 0.547760907 -1 -1 -1 0.01 dme-miR-307a-3p 7mer-m8 GGTTGTG 2R 15312904 15312910 + 2R_15312904_15312910_+ 0.702972035 0.702972035 0.702972035 0 mus210 FBtr0308700 15312836 15312964 2R + 15312843 15312937 3'utr mus210 FlyBase G16063.1 CAGCCAGGCTCCCGGAAGAGTTGGCGTTGGCAGAAGGCAGTCGAGCATGCTTATCCAAGTTGGTTGTGGCGCTGGCATTTCTGGTATCTGATGAA 13 15312903 0.980783063 8 13 89 1 1.113943352 0.153846154 0 0 13 0 0 13 2R:15312843-15312937 7 mus210 FBtr0308700 15312836 15312964 GGTTGTG 7mer-m8 dme-miR-307a-3p 2R + 15312891 15312937 3'utr mus210 FlyBase G12192.1 GCTTATCCAAGTTGGTTGTGGCGCTGGCATTTCTGGTATCTGATGAA 6 15312903 0.983056415 4 6 48 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 2R:15312891-15312937 7 7 1409 FBgn0004698 1924.22 65.94333333 101.31 0.003637838 0.106151746 0.069094857 1 1 1 0.01 dme-miR-970-3p 6mer3-8 TCTTAT 2R 15317987 15317992 - 2R_15317987_15317992_- 1 1 1 0 CG8155 FBtr0087391 15317815 15318579 2R - 15317944 15318031 3'utr CG8155 FlyBase G23587.1 GCAAATAAATTGACGGATCTATAACCCAAATAACCATAATCTTATTATCTCAAACGTTCTGTATCTTAAAAATCTCTCAACGTACTCT 9 15317986 0.984105709 8 9 69 1 1 0.2 0.111111111 0.2 9 0 0 10 2R:15317944-15318031 6 CG8155 FBtr0087391 15317815 15318579 TCTTAT 6mer3-8 dme-miR-970-3p 2R - 15317938 15317990 3'utr CG8155 FlyBase G17861.1 TTATTATCTCAAACGTTCTGTATCTTAAAAATCTCTCAACGTACTCTGAAAAC 7 15317972 0.976513542 5 7 46 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 2R:15317938-15317990 4 2.5 1410 FBgn0034009 669.7533333 19.16666667 29.26666667 0.003732718 0.130434783 0.085421412 -6 -20 -13 0.01 dme-miR-33-5p 6mer2-7 AATGCA 2R 15318092 15318097 - 2R_15318092_15318097_- 0.99999559 0.999997861 0.999996725 1.63E-06 CG8155 FBtr0087391 15317815 15318579 2R - 15318058 15318170 3'utr CG8155 FlyBase G23588.1 TTTATCTGCACCTTTGCCAAACGATCAAATGCGAGCTGTTTGGCTGGAAATTGCTTTATTTCTCTAGTCTGCTAATGCATTCCATGCTGTTGTAAAAACTATATTTTAGATTT 100 15318101 0.797159459 17 92 965 0.911290323 2.053078443 0.274193548 0.19 0.346774194 100 11 0 113 2R:15318058-15318170 6 CG8155 FBtr0087391 15317815 15318579 AATGCA 6mer2-7 dme-miR-33-5p 2R - 15318042 15318167 3'utr CG8155 FlyBase G17862.1 ATCTGCACCTTTGCCAAACGATCAAATGCGAGCTGTTTGGCTGGAAATTGCTTTATTTCTCTAGTCTGCTAATGCATTCCATGCTGTTGTAAAAACTATATTTTAGATTTAAAATCGCGCCTAAAT 64 15318101 0.989255874 17 62 594 0.978723404 1.963787827 0.308510638 0.359375 0.563829787 64 2 0 92 2R:15318042-15318167 6 43.5 1411 FBgn0034009 669.7533333 19.16666667 29.26666667 0.064949285 2.269565217 1.486332574 4 4 4 0.01 dme-miR-986-5p 6mer3-8 ATTCGA 2R 15324392 15324397 + 2R_15324392_15324397_+ 1 1 1 0 Arf51F FBtr0087379|FBtr0087376|FBtr0087375|FBtr0087377|FBtr0087378 15324343|15324343|15324343|15324343|15324343 15324892|15324892|15325490|15324892|15324892 2R + 15324188 15324432 lincRNA_intron-lincRNA_exon Arf51F FlyBase G16088.1 GTTCTCTCTTGCAGCAATGAAACCCCATGAAATCCAGGAAAAACTAGGTTTAACTAGAATAAGAGATCGCAATTGGTATGTACAACCATCATGTGCCACATCCGGCGATGGCCTGTCCGAGGGCCTCATTTGGTTAACGTCGAACCATAAGTTATGAGAATCGTAATCGAGCATTTTCTTATATGTATGTATATGGCATGTATTATTCGAAGCGAAGCAAAAGCGAAAATATTCTATTTTATTTA 44 15324381 0.982028839 22 44 322 1 1.73239376 0.240740741 0.181818182 0.333333333 44 0 0 54 2R:15324188-15324432 6 Arf51F FBtr0087378|FBtr0087375|FBtr0087377|FBtr0087379|FBtr0087376 15324343|15324343|15324343|15324343|15324343 15324892|15325490|15324892|15324892|15324892 ATTCGA 6mer3-8 dme-miR-986-5p 2R + 15324360 15324406 3'utr Arf51F FlyBase G12210.1 ATTTTCTTATATGTATGTATATGGCATGTATTATTCGAAGCGAAGCA 14 15324381 0.962592614 6 11 123 0.857142857 0.77815125 0.333333333 0.357142857 0.571428571 14 1 2 18 2R:15324360-15324406 6 12.5 1412 FBgn0013750 5123.97 471.35 724.4566667 0.002439515 0.026519571 0.01725431 11 11 11 0.01 dme-miR-304-5p 7mer-A1 GAGATTA 2R 15324693 15324699 + 2R_15324693_15324699_+ 0.823349562 0.823349562 0.823349562 0 Arf51F FBtr0087379|FBtr0087376|FBtr0087375|FBtr0087377|FBtr0087378 15324343|15324343|15324343|15324343|15324343 15324892|15324892|15325490|15324892|15324892 2R + 15324624 15324718 3'utr Arf51F FlyBase G16089.1 AAGCAGCCGGTAAATATCCGTAAAGTAAATTATGCGTGAAGCACAGAGACATAAAGCAAAACATCAACGGAGATTAGCCTTAAGTAAGTTTTTCT 21 15324698 0.958424837 9 20 97 0.966666667 1.161368002 0.066666667 0.285714286 0.5 21 0 1 29 2R:15324624-15324718 7 Arf51F FBtr0087378|FBtr0087375|FBtr0087377|FBtr0087379|FBtr0087376 15324343|15324343|15324343|15324343|15324343 15324892|15325490|15324892|15324892|15324892 GAGATTA 7mer-A1 dme-miR-304-5p 2R + 15324630 15324712 3'utr Arf51F FlyBase G12211.1 CCGGTAAATATCCGTAAAGTAAATTATGCGTGAAGCACAGAGACATAAAGCAAAACATCAACGGAGATTAGCCTTAAGTAAGT 12 15324697 0.951630036 6 11 46 0.956521739 1.041392685 0.173913043 0.583333333 0.782608696 12 0 1 22 2R:15324630-15324712 7 11.5 1413 FBgn0013750 5123.97 471.35 724.4566667 0.002244353 0.024398006 0.015873965 -5 -4 -4.5 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 15367647 15367653 + 2R_15367647_15367653_+ 0.661615645 0.661615645 0.661615645 0 unc-5 FBtr0087382|FBtr0339998 15367154|15367154 15368300|15368300 2R + 15367607 15367706 3'utr unc-5 FlyBase G16103.1 AAGTGTAGCTGTAGTCATAGTCACTAAGTTACTGTAGTGTTGTGTTCTAAGGTAACTTGCTCAACGAACTTTGTTCCCTATGGGTGCCATGCATTTTATA 26 15367646 0.735667145 14 24 230 0.9375 1.477121255 0.1875 0.153846154 0.3125 26 2 0 30 2R:15367607-15367706 7 unc-5 FBtr0339998|FBtr0087382 15367154|15367154 15368300|15368300 TGTGTTC 7mer-m8 dme-miR-317-3p 2R + 15367606 15367739 3'utr unc-5 FlyBase G12222.1 AAAGTGTAGCTGTAGTCATAGTCACTAAGTTACTGTAGTGTTGTGTTCTAAGGTAACTTGCTCAACGAACTTTGTTCCCTATGGGTGCCATGCATTTTATACACTAAACAGGAAGAATGTAGCGTTTAATTATA 27 15367646 0.771039974 15 24 231 0.95 1.579783597 0.15 0.481481481 0.65 27 2 0 38 2R:15367606-15367739 7 10.5 1414 FBgn0034013 1156.016667 26.96666667 41.28333333 0.009082914 0.389369592 0.254339927 1 1 1 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 2R 15367696 15367702 + 2R_15367696_15367702_+ 0.620204266 0.620204266 0.620204266 0 unc-5 FBtr0087382|FBtr0339998 15367154|15367154 15368300|15368300 2R + 15367607 15367706 3'utr unc-5 FlyBase G16103.1 AAGTGTAGCTGTAGTCATAGTCACTAAGTTACTGTAGTGTTGTGTTCTAAGGTAACTTGCTCAACGAACTTTGTTCCCTATGGGTGCCATGCATTTTATA 26 15367679 0.735667145 14 24 230 0.9375 1.477121255 0.1875 0.153846154 0.3125 26 2 0 30 2R:15367607-15367706 7 unc-5 FBtr0339998|FBtr0087382 15367154|15367154 15368300|15368300 TGCATTT 7mer-m8 dme-miR-277-3p 2R + 15367606 15367739 3'utr unc-5 FlyBase G12222.1 AAAGTGTAGCTGTAGTCATAGTCACTAAGTTACTGTAGTGTTGTGTTCTAAGGTAACTTGCTCAACGAACTTTGTTCCCTATGGGTGCCATGCATTTTATACACTAAACAGGAAGAATGTAGCGTTTAATTATA 27 15367696 0.771039974 15 24 231 0.95 1.579783597 0.15 0.481481481 0.65 27 2 0 38 2R:15367606-15367739 7 6.5 1415 FBgn0034013 1156.016667 26.96666667 41.28333333 0.005622756 0.241038319 0.157448526 17 0 8.5 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT 2R 15367818 15367823 + 2R_15367818_15367823_+ 1 1 1 0 unc-5 FBtr0087382|FBtr0339998 15367154|15367154 15368300|15368300 2R + 15367814 15367872 3'utr unc-5 FlyBase G16105.1 CGACAGCTGTAAGATACGAGTTCACATGGGGCAATAGGCCAAAATACATAGAGTAAGTG 9 15367840 0.948710917 5 9 31 1 0.954242509 0.222222222 0 0 9 0 0 9 2R:15367814-15367872 6 unc-5 FBtr0339998|FBtr0087382 15367154|15367154 15368300|15368300 AGCTGT 6mer3-8 dme-miR-1008-3p 2R + 15367787 15367855 3'utr unc-5 FlyBase G12223.1 ACGGTGAAAAACTGTTTGTGTACGATACGACAGCTGTAAGATACGAGTTCACATGGGGCAATAGGCCAA 7 15367821 0.946514135 4 7 28 1 0.954242509 0.222222222 0.142857143 0.333333333 7 0 0 9 2R:15367787-15367855 6 3 1416 FBgn0034013 1156.016667 26.96666667 41.28333333 0.002595118 0.111248455 0.072668551 -22 -3 -12.5 0.01 dme-miR-12-5p 7mer-A1 ATACTCA 2R 15368156 15368162 + 2R_15368156_15368162_+ 0.823348971 0.823348982 0.823348976 0 unc-5 FBtr0087382|FBtr0339998 15367154|15367154 15368300|15368300 2R + 15368143 15368223 3'utr unc-5 FlyBase G16108.1 TAGTTTGTTAGACATACTCAAGTGATAACCTTTGTATTTGTCTTTAGATGTAAGTCTGATCCTGTCGTTTAATCGTTAATC 32 15368185 0.864630377 15 30 311 0.945945946 1.544068044 0.189189189 0.125 0.243243243 32 2 0 35 2R:15368143-15368223 7 unc-5 FBtr0339998|FBtr0087382 15367154|15367154 15368300|15368300 ATACTCA 7mer-A1 dme-miR-12-5p 2R + 15368132 15368214 3'utr unc-5 FlyBase G12224.1 AACAAAACGAGTAGTTTGTTAGACATACTCAAGTGATAACCTTTGTATTTGTCTTTAGATGTAAGTCTGATCCTGTCGTTTAA 28 15368185 0.991252161 16 24 250 0.808510638 1.102662342 0.212765957 0.464285714 0.680851064 28 7 2 38 2R:15368132-15368214 7 10 1417 FBgn0034013 1156.016667 26.96666667 41.28333333 0.008650394 0.370828183 0.242228502 -29 -29 -29 0.01 dme-miR-1007-3p 6mer3-8 TGAGCT 2R 15386600 15386605 + 2R_15386600_15386605_+ 1 1 1 0 SRPK FBtr0087385|FBtr0087384 15385390|15385390 15387851|15387851 2R + 15386575 15386621 3'utr SRPK FlyBase G16125.1 GTATATGTACATGGATGCAGAAACTTGAGCTGAACATAACAATAATG 14 15386600 0.806709942 3 14 71 1 1.204119983 0.3125 0.071428571 0.1875 14 0 0 16 2R:15386575-15386621 6 SRPK FBtr0087385|FBtr0087384 15385390|15385390 15387851|15387851 TGAGCT 6mer3-8 dme-miR-1007-3p 2R + 15386579 15386614 3'utr SRPK FlyBase G12235.1 ATGTACATGGATGCAGAAACTTGAGCTGAACATAAC 9 15386600 0.720080549 3 9 36 1 1.204119983 0 0.333333333 0.625 9 0 0 16 2R:15386579-15386614 6 11 1418 FBgn0026370 1940.296667 50.52 77.84666667 0.005669236 0.21773555 0.141303417 0 0 0 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 2R 15387573 15387578 + 2R_15387573_15387578_+ 0.999999896 0.999999893 0.999999894 0 SRPK FBtr0087385|FBtr0087385|FBtr0087384|FBtr0087384 15385390|15385390|15385390|15385390 15387851|15387851|15387851|15387851 2R + 15387565 15387603 3'utr SRPK FlyBase G16130.1 TTCGAAAATACTTACGCATATACTCTTTGAAAATCGCCC 12 15387576 0.93515922 3 11 87 0.923076923 1.079181246 0 0.083333333 0.153846154 12 1 0 12 2R:15387565-15387603 6 SRPK FBtr0087385|FBtr0087385|FBtr0087384|FBtr0087384 15385390|15385390|15385390|15385390 15387851|15387851|15387851|15387851 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 2R + 15387530 15387597 3'utr SRPK FlyBase G12236.1 TAAAGAAAATTCAATAATCTTCGGCTGGCCGATGTTTCGAAAATACTTACGCATATACTCTTTGAAAA 7 15387576 0.979581991 2 7 52 1 1.041392685 0.181818182 0.571428571 0.727272727 7 0 0 11 2R:15387530-15387597 6 8 1419 FBgn0026370 1940.296667 50.52 77.84666667 0.004123081 0.158353127 0.102766121 -3 -3 -3 0.01 dme-miR-8-3p 6mer3-8 CAGTAT 2R 15387745 15387750 + 2R_15387745_15387750_+ 0.99998735 1 0.999993675 8.98E-06 SRPK FBtr0087385|FBtr0087384 15385390|15385390 15387851|15387851 2R + 15387718 15387774 3'utr SRPK FlyBase G16131.1 AGGAACCCAGCTGCCGAATTGCAATTCCAGTATGTTCTCACGCTTTCAAAGAGTATA 12 15387750 0.987288356 8 11 94 0.923076923 0.77815125 0.153846154 0.083333333 0.153846154 12 0 1 12 2R:15387718-15387774 6 SRPK FBtr0087385|FBtr0087384 15385390|15385390 15387851|15387851 CAGTAT 6mer3-8 dme-miR-8-3p 2R + 15387726 15387775 3'utr SRPK FlyBase G12237.1 AGCTGCCGAATTGCAATTCCAGTATGTTCTCACGCTTTCAAAGAGTATAA 7 15387743 0.977105951 6 7 61 1 1.041392685 0.181818182 0.428571429 0.636363636 7 0 0 11 2R:15387726-15387775 6 9 1420 FBgn0026370 1940.296667 50.52 77.84666667 0.004638466 0.178147268 0.115611887 -5 2 -1.5 0.01 dme-miR-1012-3p 7mer-A1 TGACTAA 2R 15515073 15515079 + 2R_15515073_15515079_+ 0.823349562 0.823349562 0.823349562 0 GalNAc-T1 FBtr0340001|FBtr0087332|FBtr0087331 15515017|15515017|15515017 15515597|15515597|15515597 2R + 15515013 15515099 stop_codon GalNAc-T1 FlyBase G16135.1 CACTGAGGAGATAGGGTGTAGCGGGGGAATGGGATGGGGACCAAAGCAACTGAGAGATACTGACTAACGCCGACTGAACGGAACTCG 77 15515070 0.936978837 8 67 256 0.894117647 1.579783597 0.305882353 0.077922078 0.164705882 77 8 1 76 2R:15515013-15515099 7 GalNAc-T1 FBtr0087331|FBtr0087332|FBtr0340001 15515017|15515017|15515017 15515597|15515597|15515597 TGACTAA 7mer-A1 dme-miR-1012-3p 2R + 15515055 15515105 3'utr GalNAc-T1 FlyBase G12239.1 AAAGCAACTGAGAGATACTGACTAACGCCGACTGAACGGAACTCGAATTCA 51 15515070 0.738278793 6 47 157 0.931034483 1.431363764 0.252873563 0.509803922 0.712643678 51 4 2 81 2R:15515055-15515105 7 60.5 1421 FBgn0034025 414.2533333 21.30666667 32.93666667 0.146045898 2.839486859 1.836858618 3 3 3 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2R 15515382 15515387 + 2R_15515382_15515387_+ 0.730949445 0.730949445 0.730949445 0 GalNAc-T1 FBtr0340001|FBtr0340001|FBtr0340001|FBtr0087332|FBtr0087332|FBtr0087332|FBtr0087331|FBtr0087331|FBtr0087331 15515017|15515017|15515017|15515017|15515017|15515017|15515017|15515017|15515017 15515597|15515597|15515597|15515597|15515597|15515597|15515597|15515597|15515597 2R + 15515332 15515422 3'utr GalNAc-T1 FlyBase G16136.1 AAGTTGTAAGAATAGAGTCGAACCATCCTATGTAAATGATATAGTCGCCATGTGATCGTGTAAGGATGTAAGGCAGGGTGTGGAACGATTG 25 15515390 0.98071466 9 24 164 0.964285714 1.431363764 0.571428571 0.12 0.214285714 25 1 0 27 2R:15515332-15515422 6 GalNAc-T1 FBtr0087331|FBtr0087331|FBtr0087331|FBtr0087332|FBtr0087332|FBtr0087332|FBtr0340001|FBtr0340001|FBtr0340001 15515017|15515017|15515017|15515017|15515017|15515017|15515017|15515017|15515017 15515597|15515597|15515597|15515597|15515597|15515597|15515597|15515597|15515597 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 15515367 15515405 3'utr GalNAc-T1 FlyBase G12241.1 ATGATATAGTCGCCATGTGATCGTGTAAGGATGTAAGGC 10 15515390 0.748090895 2 8 66 0.764705882 1.113943352 0.176470588 0.6 0.764705882 10 4 0 13 2R:15515367-15515405 6 15.5 1422 FBgn0034025 414.2533333 21.30666667 32.93666667 0.037416718 0.72747184 0.470600142 -8 -8 -8 0.01 dme-miR-980-5p 7mer-m1 AAAAACT 2R 15515562 15515568 + 2R_15515562_15515568_+ 0.765586663 0.765586663 0.765586663 0 GalNAc-T1 FBtr0340001|FBtr0087332|FBtr0087331 15515017|15515017|15515017 15515597|15515597|15515597 2R + 15515536 15515598 3'utr GalNAc-T1 FlyBase G16137.1 TTTGCCATTTGTTTTCATGAATAAAAAAAAACTTCCGACTGGAGGATGTACATCTTCAAACGA 22 15515568 0.886445281 6 22 134 1 1.414973348 0.384615385 0.090909091 0.230769231 22 0 0 26 2R:15515536-15515598 7 GalNAc-T1 FBtr0087331|FBtr0087332|FBtr0340001 15515017|15515017|15515017 15515597|15515597|15515597 AAAAACT 7mer-m1 dme-miR-980-5p 2R + 15515559 15515598 3'utr GalNAc-T1 FlyBase G12242.1 AAAAAAAACTTCCGACTGGAGGATGTACATCTTCAAACGA 9 15515568 0.924470398 2 9 35 1 1.041392685 0.636363636 0.222222222 0.363636364 9 0 0 11 2R:15515559-15515598 7 12.5 1423 FBgn0034025 414.2533333 21.30666667 32.93666667 0.030174772 0.586670839 0.379516243 -6 -6 -6 0.01 dme-miR-11-3p 7mer-m1 TGTGATG 2R 15517768 15517774 - 2R_15517768_15517774_- 0.535593563 0.535593563 0.535593563 0 Khc-73 FBtr0329957|FBtr0087357|FBtr0329956|FBtr0329955|FBtr0346265 15517705|15517705|15515776|15517705|15517705 15518577|15518751|15518751|15518751|15518751 2R - 15517747 15517797 3'utr Khc-73 FlyBase G23622.1 ATGTGTAAATTGTATTATTTTGATGTGATGTATTTATAATTTCCCTTTATA 55 15517779 0.662314028 12 50 715 0.904761905 1.755874856 0.222222222 0.145454545 0.253968254 55 6 0 57 2R:15517747-15517797 7 Khc-73 FBtr0329955|FBtr0346265|FBtr0087357|FBtr0329956|FBtr0329957 15517705|15517705|15517705|15515776|15517705 15518751|15518751|15518751|15518751|15518577 TGTGATG 7mer-m1 dme-miR-11-3p 2R - 15517754 15517813 3'utr Khc-73 FlyBase G17883.1 CGCACCGTCGCAGTTAATGTGTAAATTGTATTATTTTGATGTGATGTATTTATAATTTCC 46 15517778 0.619482257 9 42 572 0.920634921 1.286306739 0.174603175 0.282608696 0.476190476 46 3 2 58 2R:15517754-15517813 7 46.5 1424 FBgn0019968 1323.716667 22.35333333 34.32 0.035128363 2.080226663 1.354895105 5 4 4.5 0.01 dme-miR-1007-3p 6mer3-8 TGAGCT 2R 15517964 15517969 - 2R_15517964_15517969_- 1 1 1 0 Khc-73 FBtr0329957|FBtr0087357|FBtr0329956|FBtr0329955|FBtr0346265 15517705|15517705|15515776|15517705|15517705 15518577|15518751|15518751|15518751|15518751 2R - 15517937 15517994 3'utr Khc-73 FlyBase G23623.1 AATTTCGTCTCCATATGACCTTTCCTGAGCTCATTTTCTTTTTAGCGCATTTATATAC 25 15517979 0.990037848 8 24 237 0.96969697 1.505149978 0.03030303 0.24 0.424242424 25 1 0 32 2R:15517937-15517994 6 Khc-73 FBtr0329955|FBtr0346265|FBtr0087357|FBtr0329956|FBtr0329957 15517705|15517705|15517705|15515776|15517705 15518751|15518751|15518751|15518751|15518577 TGAGCT 6mer3-8 dme-miR-1007-3p 2R - 15517946 15518008 3'utr Khc-73 FlyBase G17884.1 TAAGATCTTGCAATAATTTCGTCTCCATATGACCTTTCCTGAGCTCATTTTCTTTTTAGCGCA 12 15517960 0.989103882 8 11 108 1 1.342422681 0.045454545 0.583333333 0.772727273 12 0 0 22 2R:15517946-15518008 6 14 1425 FBgn0019968 1323.716667 22.35333333 34.32 0.010576281 0.626304802 0.407925408 10 -9 0.5 0.01 dme-miR-283-5p 6mer3-8 TGATAT 2R 15518137 15518142 - 2R_15518137_15518142_- 1 1 1 0 Khc-73 FBtr0329957|FBtr0087357|FBtr0329956|FBtr0329955|FBtr0346265 15517705|15517705|15515776|15517705|15517705 15518577|15518751|15518751|15518751|15518751 2R - 15518019 15518168 3'utr Khc-73 FlyBase G23624.1 TTCGATTTTGGAATGAAGCGTTTTACTGATATATTTTCTAATGGTTCTTTGCCTTTAGTTTAGTTAAATTGTTTTTGATATCAATGTGACTTGTTTAACGATGAGCTTATATTTTTACTTGTTATTGACTATATTCAATATATTTGTATA 70 15518146 0.993028279 21 65 770 0.93902439 1.886490725 0.243902439 0.1 0.231707317 70 5 0 77 2R:15518019-15518168 6 Khc-73 FBtr0329955|FBtr0346265|FBtr0087357|FBtr0329956|FBtr0329957 15517705|15517705|15517705|15515776|15517705 15518751|15518751|15518751|15518751|15518577 TGATAT 6mer3-8 dme-miR-283-5p 2R - 15518102 15518215 3'utr Khc-73 FlyBase G17886.1 TGATTCCATTGTTTTGTGTTCGTGTAGTTAATTGTCGTTTTTTGCTTTTCGATTTTGGAATGAAGCGTTTTACTGATATATTTTCTAATGGTTCTTTGCCTTTAGTTTAGTTAA 21 15518146 0.984626508 10 20 248 0.961538462 1.397940009 0.115384615 0.238095238 0.384615385 21 1 0 25 2R:15518102-15518215 6 11 1426 FBgn0019968 1323.716667 22.35333333 34.32 0.008309935 0.49209663 0.320512821 4 4 4 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 15518195 15518201 - 2R_15518195_15518201_- 0.661615645 0.661615645 0.661615645 0 Khc-73 FBtr0329957|FBtr0087357|FBtr0329956|FBtr0329955|FBtr0346265 15517705|15517705|15515776|15517705|15517705 15518577|15518751|15518751|15518751|15518751 2R - 15518179 15518219 3'utr Khc-73 FlyBase G23625.1 CTTTTGATTCCATTGTTTTGTGTTCGTGTAGTTAATTGTCG 15 15518202 0.755233482 4 15 228 1 1.230448921 0.176470588 0.133333333 0.235294118 15 0 0 17 2R:15518179-15518219 7 Khc-73 FBtr0329955|FBtr0346265|FBtr0087357|FBtr0329956|FBtr0329957 15517705|15517705|15517705|15515776|15517705 15518751|15518751|15518751|15518751|15518577 TGTGTTC 7mer-m8 dme-miR-317-3p 2R - 15518102 15518215 3'utr Khc-73 FlyBase G17886.1 TGATTCCATTGTTTTGTGTTCGTGTAGTTAATTGTCGTTTTTTGCTTTTCGATTTTGGAATGAAGCGTTTTACTGATATATTTTCTAATGGTTCTTTGCCTTTAGTTTAGTTAA 21 15518202 0.984626508 10 20 248 0.961538462 1.397940009 0.115384615 0.238095238 0.384615385 21 1 0 25 2R:15518102-15518215 7 11 1427 FBgn0019968 1323.716667 22.35333333 34.32 0.008309935 0.49209663 0.320512821 1 1 1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 15562855 15562861 - 2R_15562855_15562861_- 0.754178804 0.754178804 0.754178804 0 CG8195 FBtr0087353|FBtr0087353|FBtr0087353 15562695|15562695|15562695 15563163|15563163|15563163 2R - 15562828 15562887 3'utr CG8195 FlyBase G23655.2 TAGATCCCACGAATACCGTTTATCTATGTGATAGTCTACAACGTTTTGCTGAACTCCACC 22 15562865 0.989705506 6 18 194 0.888888889 1.380211242 0.481481481 0.227272727 0.37037037 22 3 0 24 2R:15562828-15562887 7 CG8195 FBtr0087353|FBtr0087353|FBtr0087353 15562695|15562695|15562695 15563163|15563163|15563163 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 15562848 15562890 3'utr CG8195 FlyBase G17905.1 CTTTAGATCCCACGAATACCGTTTATCTATGTGATAGTCTACA 17 15562864 0.992582069 3 13 153 0.8 1 0.44 0.411764706 0.6 17 4 1 20 2R:15562848-15562890 7 17 1428 FBgn0034032 150.0733333 7.953333333 12.14666667 0.113277953 2.137468567 1.399560922 4 3 3.5 0.01 dme-miR-92b-3p 6mer2-7 TGCAAT 2R 15563082 15563087 - 2R_15563082_15563087_- 0.999997509 0.999999948 0.999998729 1.70E-06 CG8195 FBtr0087353 15562695 15563163 2R - 15562920 15563162 3'utr CG8195 FlyBase G23656.1 CAATAGCAATAATCACGAATGGAGGCTTTTTGTAAAAGTCGGGCTTCTACAAACTTTGAATGTTGCTCATTGCAATGCAATCTAAAACTTGGCTGTTTACGAGTTCGTTTCGAATCGTTCTTAAATCATATTGGGACAAGTCCTGCACAATTTCCCTTCGGCCCTGATTTGTGTTTCTCATTTGTGCATTTTTCGTTGGATATTATTGTGTTGCGAACTTACGTACAACTATTTATTATAATC 92 15563073 0.986384431 18 86 777 0.925619835 1.748188027 0.107438017 0.27173913 0.446280992 92 8 1 112 2R:15562920-15563162 6 CG8195 FBtr0087353 15562695 15563163 TGCAAT 6mer2-7 dme-miR-92b-3p 2R - 15563054 15563089 3'utr CG8195 FlyBase G17907.1 AATGCAATCTAAAACTTGGCTGTTTACGAGTTCGTT 39 15563073 0.795119635 2 38 292 0.953125 1.785329835 0.015625 0.487179487 0.6875 39 3 0 61 2R:15563054-15563089 6 33 1429 FBgn0034032 150.0733333 7.953333333 12.14666667 0.219892497 4.149203688 2.716794731 -14 -14 -14 0.01 dme-miR-965-3p 6mer3-8 TACGCT 2R 15566490 15566495 - 2R_15566490_15566495_- 1 1 1 0 Flo1 FBtr0087351|FBtr0087352 15566269|15566269 15566573|15566573 2R - 15566438 15566514 3'utr Flo1 FlyBase G23661.1 AAGAAAACAAAAAAGAAATTACGCTATATTGAACGATCGAATACTTCAAAACTGAAATCGAACGCATTTAAATTTCT 34 15566496 0.96756181 6 32 177 0.955555556 1.633468456 0.022222222 0.235294118 0.422222222 34 2 0 43 2R:15566438-15566514 6 Flo1 FBtr0087351|FBtr0087352 15566269|15566269 15566573|15566573 TACGCT 6mer3-8 dme-miR-965-3p 2R - 15566457 15566508 3'utr Flo1 FlyBase G17910.1 ACAAAAAAGAAATTACGCTATATTGAACGATCGAATACTTCAAAACTGAAAT 26 15566495 0.929498394 5 25 135 0.96969697 1.505149978 0.03030303 0.230769231 0.393939394 26 1 0 32 2R:15566457-15566508 6 27.5 1430 FBgn0024754 1484.76 99.31333333 151.9633333 0.018521512 0.27690139 0.180964706 1 0 0.5 0.01 dme-miR-1007-3p 6mer3-8 TGAGCT 2R 15569895 15569900 - 2R_15569895_15569900_- 1 1 1 0 Cdk5 FBtr0087350 15569526 15570131 2R - 15569873 15569934 3'utr Cdk5 FlyBase G23670.1 AATCCCTACCAATGTGACACTTAATATAGCCATTTGAGCTGCCAAATTAACATTTATCGATA 30 15569901 0.964499519 7 29 199 0.947368421 1.556302501 0.026315789 0.266666667 0.421052632 30 2 0 36 2R:15569873-15569934 6 Cdk5 FBtr0087350 15569526 15570131 TGAGCT 6mer3-8 dme-miR-1007-3p 2R - 15569884 15569935 3'utr Cdk5 FlyBase G17916.1 CAATCCCTACCAATGTGACACTTAATATAGCCATTTGAGCTGCCAAATTAAC 17 15569901 0.968412684 4 16 94 1 1.414973348 0.038461538 0.5 0.692307692 16 0 0 26 2R:15569884-15569935 6 20 1431 FBgn0013762 182.3333333 13.78 20.92333333 0.109689214 1.45137881 0.955870639 1 1 1 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 2R 15572953 15572959 + 2R_15572953_15572959_+ 0.823349562 0.811453371 0.817401467 0.008411884 CG30466 FBtr0340004|FBtr0087339 15572925|15572925 15573170|15573170 2R + 15572941 15572964 3'utr CG30466 FlyBase G16152.1 GAACGAAGCTGTAGACTGATGACT 23 15572960 0.649982143 3 22 73 0.970588235 1.217483944 0.029411765 0.347826087 0.558823529 23 0 1 33 2R:15572941-15572964 7 CG30466 FBtr0087339|FBtr0340004 15572925|15572925 15573170|15573170 AGACTGA 7mer-A1 dme-miR-14-3p 2R + 15572941 15572965 3'utr CG30466 FlyBase G12258.1 GAACGAAGCTGTAGACTGATGACTA 18 15572960 0.660615026 3 17 64 0.928571429 0.937852093 0 0.5 0.678571429 18 0 2 26 2R:15572941-15572965 7 20 1432 FBgn0050466 280.3266667 17.32333333 26.4 0.071345335 1.154512219 0.757575758 -7 -7 -7 0.01 dme-miR-1007-3p 6mer3-8 TGAGCT 2R 15761571 15761576 + 2R_15761571_15761576_+ 1 1 1 0 CG30089 FBtr0340007 15761253 15762044 2R + 15761554 15761595 3'utr CG30089 FlyBase G16203.1 TAGAACATGAGAAACTCTGAGCTCAGCCAACGACTAATTGAA 11 15761571 0.687239859 3 11 33 1 1.079181246 0.166666667 0.090909091 0.166666667 11 0 0 12 2R:15761554-15761595 6 CG30089 FBtr0340007 15761253 15762044 TGAGCT 6mer3-8 dme-miR-1007-3p 2R + 15761560 15761601 3'utr CG30089 FlyBase G12299.1 ATGAGAAACTCTGAGCTCAGCCAACGACTAATTGAACTGTAA 8 15761591 0.87833296 2 8 29 1 1.079181246 0.416666667 0.375 0.583333333 8 0 0 12 2R:15761560-15761601 6 9 1433 FBgn0050089 166.2933333 6.12 9.303333333 0.054121232 1.470588235 0.967395199 0 -20 -10 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 2R 15762806 15762811 - 2R_15762806_15762811_- 0.999999999 1 0.999999999 0 Zasp52 FBtr0310088|FBtr0301313|FBtr0310087|FBtr0310086|FBtr0329913|FBtr0329915|FBtr0111048|FBtr0100387|FBtr0087315|FBtr0329914|FBtr0329916|FBtr0342711|FBtr0100388|FBtr0329912|FBtr0329911 15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563 15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192 2R - 15762768 15762875 3'utr Zasp52 FlyBase G23685.1 ATTCAAACATCGTATCATAACCGAACTACCGAACCCCAGATAACTATGTATGTACTGTGGCCAGAGTTAATTTACTTAGTTGAGCCTGAAAACTGTTGATCAACCCGT 14 15762820 0.97344292 9 14 80 1 1.204119983 0.125 0.071428571 0.1875 14 0 0 16 2R:15762768-15762875 6 Zasp52 FBtr0329912|FBtr0100387|FBtr0329911|FBtr0329913|FBtr0329916|FBtr0310087|FBtr0100388|FBtr0310088|FBtr0329915|FBtr0111048|FBtr0087315|FBtr0329914|FBtr0301313|FBtr0342711|FBtr0310086 15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563 15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192 AGTTAA 6mer3-8 dme-miR-999-3p 2R - 15762732 15762831 3'utr Zasp52 FlyBase G17923.1 TATGTATGTACTGTGGCCAGAGTTAATTTACTTAGTTGAGCCTGAAAACTGTTGATCAACCCGTAACCAAAAGCTAACAAATCGCGCGAGAGGATTTCCC 8 15762822 0.979321101 6 8 50 1 1 0.1 0.25 0.4 8 0 0 10 2R:15762732-15762831 6 4.5 1434 FBgn0265991 371.52 11.31333333 17.32 0.012112403 0.397760754 0.259815242 9 11 10 0.01 dme-miR-92b-3p 7mer-m1 TGCAATT 2R 15763056 15763062 - 2R_15763056_15763062_- 0.765586663 0.765586663 0.765586663 0 Zasp52 FBtr0310088|FBtr0301313|FBtr0310087|FBtr0310086|FBtr0329913|FBtr0329915|FBtr0111048|FBtr0100387|FBtr0087315|FBtr0329914|FBtr0329916|FBtr0342711|FBtr0100388|FBtr0329912|FBtr0329911 15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563 15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192 2R - 15763027 15763123 3'utr Zasp52 FlyBase G23686.1 AGAATCTTCGGATTACTTGGATACGGGAGCTTGCTCCCAACTCGTATCTAATGCTTATTATTGCAATTGTCAGAGTGAATAATGCGTAACTATTATT 15 15763069 0.976960763 9 15 108 1 1.204119983 0.125 0.066666667 0.125 15 0 0 16 2R:15763027-15763123 7 Zasp52 FBtr0329912|FBtr0100387|FBtr0329911|FBtr0329913|FBtr0329916|FBtr0310087|FBtr0100388|FBtr0310088|FBtr0329915|FBtr0111048|FBtr0087315|FBtr0329914|FBtr0301313|FBtr0342711|FBtr0310086 15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563 15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192 TGCAATT 7mer-m1 dme-miR-92b-3p 2R - 15763033 15763109 3'utr Zasp52 FlyBase G17924.1 ACTTGGATACGGGAGCTTGCTCCCAACTCGTATCTAATGCTTATTATTGCAATTGTCAGAGTGAATAATGCGTAACT 12 15763066 0.963067202 9 11 81 0.9 1.255272505 0.05 0.583333333 0.75 12 2 0 18 2R:15763033-15763109 7 6 1435 FBgn0265991 371.52 11.31333333 17.32 0.016149871 0.530347672 0.346420323 7 4 5.5 0.01 dme-miR-980-3p 6mer2-7 GCAGCT 2R 15854293 15854298 + 2R_15854293_15854298_+ 0.999088549 1 0.999544275 0.000644528 tun FBtr0308815|FBtr0308814 15853194|15853194 15854981|15855645 2R + 15854222 15854325 3'utr tun FlyBase G16210.1 CGTATCGTTTCCCCTTCGATTAATGACTTGTGACGCGCAAAGACTGATTCATTATACGCCCTACGGTAGCTGCAGCTCCTCTTCAAATGCCTCCTCGTGTTTTA 37 15854292 0.746358424 14 32 226 0.886363636 1.591064607 0.113636364 0.162162162 0.295454545 37 5 0 39 2R:15854222-15854325 6 tun FBtr0308815|FBtr0308814 15853194|15853194 15854981|15855645 GCAGCT 6mer2-7 dme-miR-980-3p 2R + 15854222 15854305 3'utr tun FlyBase G12305.1 CGTATCGTTTCCCCTTCGATTAATGACTTGTGACGCGCAAAGACTGATTCATTATACGCCCTACGGTAGCTGCAGCTCCTCTTC 17 15854269 0.972673941 6 15 97 0.923076923 1.079181246 0.076923077 0.352941176 0.576923077 17 1 1 24 2R:15854222-15854305 6 9.5 1436 FBgn0034046 647.0966667 28.77333333 44.19 0.01468096 0.330166821 0.214980765 1 24 12.5 0.01 dme-miR-277-3p 7mer-A1 GCATTTA 2R 15854420 15854426 + 2R_15854420_15854426_+ 0.823349562 0.823349562 0.823349562 0 tun FBtr0308815|FBtr0308814 15853194|15853194 15854981|15855645 2R + 15854409 15854461 3'utr tun FlyBase G16211.1 TAACGAAACTCGCATTTATTTATGATTCTCTGGCTTACACATTGATTTTTGAT 7 15854447 0.992180138 6 7 81 1 1 0 0.428571429 0.6 7 0 0 10 2R:15854409-15854461 7 tun FBtr0308815|FBtr0308814 15853194|15853194 15854981|15855645 GCATTTA 7mer-A1 dme-miR-277-3p 2R + 15854376 15854447 3'utr tun FlyBase G12306.1 TGTTCGGCTTCCAACCTTTAGACTCGGATTAGTTAACGAAACTCGCATTTATTTATGATTCTCTGGCTTACA 7 15854428 0.985872301 5 7 69 1 0.84509804 0.285714286 0 0 7 0 0 7 2R:15854376-15854447 7 4.5 1437 FBgn0034046 647.0966667 28.77333333 44.19 0.006954139 0.15639481 0.101832994 -27 -8 -17.5 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 15854560 15854565 + 2R_15854560_15854565_+ 1 1 1 0 tun FBtr0308815|FBtr0308814 15853194|15853194 15854981|15855645 2R + 15854550 15854581 3'utr tun FlyBase G16212.1 AAAAATAAATGCTGTGCAAAAGTCTCAAAGTT 7 15854559 0.76654153 3 7 34 1 1 0.1 0.428571429 0.6 7 0 0 10 2R:15854550-15854581 6 tun FBtr0308815|FBtr0308814 15853194|15853194 15854981|15855645 GCTGTG 6mer2-7 dme-miR-1008-3p 2R + 15854545 15854600 3'utr tun FlyBase G12307.1 TGTATAAAAATAAATGCTGTGCAAAAGTCTCAAAGTTAAACCTAAACTCTTAATTA 10 15854559 0.960943703 2 10 53 1 1.146128036 0.142857143 0.3 0.5 10 0 0 14 2R:15854545-15854600 6 7.5 1438 FBgn0034046 647.0966667 28.77333333 44.19 0.011590231 0.260658017 0.169721656 1 1 1 0.01 dme-miR-317-3p 8mer-A1 TGTGTTCA 2R 15869650 15869657 - 2R_15869650_15869657_- 0.631136783 0.631136783 0.631136783 0 sli FBtr0330732 15869493 15873378 2R - 15869633 15869703 3'utr sli FlyBase G23755.1 TTAACCTTTTTCCGGCGAAGCTTTCGACGGTTCACAGCCGCAAAATTGTGTTCAGCTAATTAATTAGGAAG 74 15869658 0.907520099 4 67 494 0.892857143 1.397940009 0.083333333 0.121621622 0.226190476 74 7 2 75 2R:15869633-15869703 8 sli FBtr0330732 15869493 15873378 TGTGTTCA 8mer-A1 dme-miR-317-3p 2R - 15869632 15869699 3'utr sli FlyBase G17980.1 CCTTTTTCCGGCGAAGCTTTCGACGGTTCACAGCCGCAAAATTGTGTTCAGCTAATTAATTAGGAAGA 38 15869658 0.979534386 4 36 242 0.967741935 1.477121255 0.14516129 0.394736842 0.629032258 38 1 1 60 2R:15869632-15869699 8 53.5 1439 FBgn0264089 1642.536667 21.12333333 32.62 0.032571571 2.532744201 1.640098099 1 1 1 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA 2R 15870223 15870228 - 2R_15870223_15870228_- 1 0.845817957 0.922908979 0.109023138 sli FBtr0330730|FBtr0330729|FBtr0330733|FBtr0330732|FBtr0330734|FBtr0330731 15870052|15870052|15870052|15869493|15870052|15870052 15873378|15873378|15873378|15873378|15871419|15873378 2R - 15870203 15870239 3'utr sli FlyBase G23761.1 AAACTAAATGTGTGCAAATCGAAGCGTAACTAATATT 8 15870231 0.707190774 3 8 42 1 1 0.1 0.125 0.3 8 0 0 10 2R:15870203-15870239 6 sli FBtr0330734|FBtr0330731|FBtr0330733|FBtr0330732|FBtr0330730|FBtr0330729 15870052|15870052|15870052|15869493|15870052|15870052 15871419|15873378|15873378|15873378|15873378|15873378 GTGCAA 6mer3-8 dme-miR-92b-3p 2R - 15870070 15870265 3'utr sli FlyBase G17984.1 GTGTTTTCCTAGAATTAGTCCTAATTAAACTAAATGTGTGCAAATCGAAGCGTAACTAATATTACAATTAATCTAAACTAATTGAGGAAACATAAACCTAAACATAAATCGGATAACAACATCTAAGCTGGGTAGTCGCATGTAAATCTCTAACAATTAACAATTACCGACCTAAGTTAGACCTAAAAATCGAAAC 41 15870231 0.948074765 20 39 232 0.925373134 1.792391689 0.134328358 0.487804878 0.686567164 41 5 0 62 2R:15870070-15870265 6 7 1440 FBgn0264089 1642.536667 21.12333333 32.62 0.004261701 0.331387092 0.214592275 3 3 3 0.01 dme-miR-8-3p 6mer2-7 AGTATT 2R 15870380 15870385 - 2R_15870380_15870385_- 1 1 1 0 sli FBtr0330730|FBtr0330729|FBtr0330733|FBtr0330732|FBtr0330734|FBtr0330731 15870052|15870052|15870052|15869493|15870052|15870052 15873378|15873378|15873378|15873378|15871419|15873378 2R - 15870322 15870411 3'utr sli FlyBase G23762.1 TTTAGTCTAAGTTGCTCAAAGGATAAAGTATTTTGATAGAACCGGAAAGGATCGAGAAACAAACCAATAAACCACAAAGAATCGAATTGA 11 15870380 0.964979251 6 10 49 0.923076923 1.079181246 0.307692308 0.181818182 0.307692308 11 1 0 12 2R:15870322-15870411 6 sli FBtr0330734|FBtr0330731|FBtr0330733|FBtr0330732|FBtr0330730|FBtr0330729 15870052|15870052|15870052|15869493|15870052|15870052 15871419|15873378|15873378|15873378|15873378|15873378 AGTATT 6mer2-7 dme-miR-8-3p 2R - 15870356 15870411 3'utr sli FlyBase G17985.1 TTTAGTCTAAGTTGCTCAAAGGATAAAGTATTTTGATAGAACCGGAAAGGATCGAG 8 15870376 0.970534642 6 8 45 1 1.113943352 0 0.5 0.692307692 8 0 0 13 2R:15870356-15870411 6 4.5 1441 FBgn0264089 1642.536667 21.12333333 32.62 0.002739665 0.213034559 0.137952177 -5 -9 -7 0.01 dme-miR-970-3p 6mer3-8 TCTTAT 2R 15871121 15871126 - 2R_15871121_15871126_- 1 1 1 0 sli FBtr0330730|FBtr0330729|FBtr0330733|FBtr0330732|FBtr0330734|FBtr0330731 15870052|15870052|15870052|15869493|15870052|15870052 15873378|15873378|15873378|15873378|15871419|15873378 2R - 15871051 15871139 3'utr sli FlyBase G23766.1 ATTTATATATCTATCTTATCCTTCGACATTGTGCTCGCAAATGCGGACACTTCCTTGCTACACATGTATTCTATATATTCGCATATATC 16 15871110 0.985008085 7 16 139 1 1.230448921 0.117647059 0.0625 0.117647059 16 0 0 17 2R:15871051-15871139 6 sli FBtr0330734|FBtr0330731|FBtr0330733|FBtr0330732|FBtr0330730|FBtr0330729 15870052|15870052|15870052|15869493|15870052|15870052 15871419|15873378|15873378|15873378|15873378|15873378 TCTTAT 6mer3-8 dme-miR-970-3p 2R - 15871051 15871134 3'utr sli FlyBase G17988.1 TATATCTATCTTATCCTTCGACATTGTGCTCGCAAATGCGGACACTTCCTTGCTACACATGTATTCTATATATTCGCATATATC 14 15871110 0.974977402 10 14 93 1 1.322219295 0 0.285714286 0.523809524 14 0 0 21 2R:15871051-15871134 6 3 1442 FBgn0264089 1642.536667 21.12333333 32.62 0.001826443 0.142023039 0.091968118 -16 -16 -16 0.01 dme-miR-282-5p 6mer2-7 GAGGCT 2R 15871318 15871323 - 2R_15871318_15871323_- 1 1 1 0 sli FBtr0330730|FBtr0330729|FBtr0330733|FBtr0330732|FBtr0330734|FBtr0330731 15870052|15870052|15870052|15869493|15870052|15870052 15873378|15873378|15873378|15873378|15871419|15873378 2R - 15871294 15871366 3'utr sli FlyBase G23768.1 AATCCCCGTTTCCTGCATCGTCATGATCATCATGCAGTCTATGGAGGCTGGCTAGCTGCCTTCGGGATGCAAG 60 15871325 0.834554045 5 59 393 0.985294118 1.826074803 0.147058824 0.1 0.205882353 60 1 0 67 2R:15871294-15871366 6 sli FBtr0330734|FBtr0330731|FBtr0330733|FBtr0330732|FBtr0330730|FBtr0330729 15870052|15870052|15870052|15869493|15870052|15870052 15871419|15873378|15873378|15873378|15873378|15873378 GAGGCT 6mer2-7 dme-miR-282-5p 2R - 15871242 15871393 3'utr sli FlyBase G17990.1 TGTCGAATGCCCCACATCCCCCCACCCAATCCCCGTTTCCTGCATCGTCATGATCATCATGCAGTCTATGGAGGCTGGCTAGCTGCCTTCGGGATGCAAGGTCCTTCTTCTACTACTAGCACTCATATACTCGAATATATACTCGTACTCGT 51 15871325 0.973084258 12 51 311 1 1.913813852 0.146341463 0.392156863 0.62195122 51 0 0 82 2R:15871242-15871393 6 33.5 1443 FBgn0264089 1642.536667 21.12333333 32.62 0.020395283 1.585923939 1.026977315 2 2 2 0.01 dme-miR-305-5p 7mer-m8 AGTACAA 2R 15871415 15871421 - 2R_15871415_15871421_- 0.643267584 0.643267584 0.643267584 0 sli FBtr0330730|FBtr0330729|FBtr0330733|FBtr0330732|FBtr0330731 15870052|15870052|15870052|15869493|15870052 15873378|15873378|15873378|15873378|15873378 2R - 15871399 15871452 stop_codon sli FlyBase G23769.1 ATCCTCGATCAGCTGCGCATGATGCACTGGTAGTACAACAAGGGGGATTCGATT 89 15871422 0.789959357 6 82 461 0.915789474 1.638489257 0.231578947 0.06741573 0.126315789 89 7 1 87 2R:15871399-15871452 7 sli FBtr0330731|FBtr0330733|FBtr0330732|FBtr0330730|FBtr0330729 15870052|15870052|15869493|15870052|15870052 15873378|15873378|15873378|15873378|15873378 AGTACAA 7mer-m8 dme-miR-305-5p 2R - 15871400 15871442 stop_codon sli FlyBase G17991.1 AGCTGCGCATGATGCACTGGTAGTACAACAAGGGGGATTCGAT 26 15871422 0.760137251 4 23 123 0.918918919 1.531478917 0.243243243 0.346153846 0.540540541 26 3 0 34 2R:15871400-15871442 7 55 1444 FBgn0264089 1642.536667 21.12333333 32.62 0.033484793 2.60375572 1.686082158 1 1 1 0.01 dme-bantam-3p 6mer2-7 GATCTC 2R 15873130 15873135 - 2R_15873130_15873135_- 1 1 1 0 sli FBtr0330730|FBtr0330729|FBtr0330733|FBtr0330732|FBtr0330731 15870052|15870052|15870052|15869493|15870052 15873378|15873378|15873378|15873378|15873378 2R - 15873057 15873284 3'utr sli FlyBase G23772.1 ATAGTAACGATAGTCTTAGCCATAGCACTAGGGATAGCACGGATGTTAGGGGGACGAAGGATGAAGCGGAGGAGAGTGCTGACGCGGGGGAGACAACGGAGGAGGTGAGGGACGAGAGTGATGATTACCCCACGGACGGCATGCAGTCCGATCTCTACGACGACACCATCGATGACGACGATGACGATGGTCTCGATGATGATTATGCAGACGAGGAGGATGGGGAGG 92 15873129 0.999981595 19 79 374 0.866071429 1.032529225 0.160714286 0.173913043 0.321428571 92 7 8 97 2R:15873057-15873284 6 sli FBtr0330731|FBtr0330733|FBtr0330732|FBtr0330730|FBtr0330729 15870052|15870052|15869493|15870052|15870052 15873378|15873378|15873378|15873378|15873378 GATCTC 6mer2-7 dme-bantam-3p 2R - 15873120 15873159 3'utr sli FlyBase G17993.1 TACCCCACGGACGGCATGCAGTCCGATCTCTACGACGACA 20 15873129 0.855016061 4 16 80 0.838709677 1.414973348 0.032258065 0.3 0.548387097 20 5 0 26 2R:15873120-15873159 6 33 1445 FBgn0264089 1642.536667 21.12333333 32.62 0.020090876 1.562253432 1.011649295 -6 -6 -6 0.01 dme-miR-970-3p 6mer3-8 TCTTAT 2R 15932271 15932276 - 2R_15932271_15932276_- 1 1 1 0 Diap2 FBtr0087296|FBtr0087297 15932168|15932168 15932631|15932631 2R - 15932177 15932322 3'utr Diap2 FlyBase G23823.1 ATGCACCGGCACGACCGCAGATCACATGGATTTCTTGTTATAGTACTCTTATTAACACATGTATGTATTTTTGTTGATCATGTTTATAGGCCGCTGATAGTATGGTTTACACACAACTATATGCATTCTCCAATAAATGTATATGT 39 15932288 0.946806241 19 38 292 0.977777778 1.643452676 0.088888889 0.153846154 0.266666667 39 1 0 44 2R:15932177-15932322 6 Diap2 FBtr0087297|FBtr0087296 15932168|15932168 15932631|15932631 TCTTAT 6mer3-8 dme-miR-970-3p 2R - 15932275 15932316 3'utr Diap2 FlyBase G18041.1 CGGCACGACCGCAGATCACATGGATTTCTTGTTATAGTACTC 10 15932291 0.982132601 5 9 71 1 1.079181246 0.25 0.2 0.333333333 10 0 0 12 2R:15932275-15932316 1 3.5 1446 FBgn0015247 770.1333333 45.09 68.51666667 0.004544668 0.077622533 0.051082462 12 15 13.5 0.01 dme-miR-307a-3p 6mer3-8 GGTTGT 2R 15932443 15932448 - 2R_15932443_15932448_- 1 1 1 0 Diap2 FBtr0087296|FBtr0087297 15932168|15932168 15932631|15932631 2R - 15932404 15932570 3'utr Diap2 FlyBase G23825.1 TTGCACCCACACAAACTACTACAGCGAAGTTCAAATTATCCGGTGATTAGCTAATATAATCGTCTACTAATCGTCTACTAAGTACTTGGCCAACTGCAGCTATTCGTTTTTACATTAGCTACGGTTGTAAGTTGTCGTTACTAACTATCGCATTGTGTCCGAGCGCA 90 15932439 0.987923482 21 88 787 0.971153846 1.402261382 0.173076923 0.155555556 0.269230769 90 0 3 101 2R:15932404-15932570 6 Diap2 FBtr0087297|FBtr0087296 15932168|15932168 15932631|15932631 GGTTGT 6mer3-8 dme-miR-307a-3p 2R - 15932396 15932502 3'utr Diap2 FlyBase G18042.1 AATCGTCTACTAAGTACTTGGCCAACTGCAGCTATTCGTTTTTACATTAGCTACGGTTGTAAGTTGTCGTTACTAACTATCGCATTGTGTCCGAGCGCATCCCTTTT 33 15932439 0.987464439 7 32 289 0.983050847 1.763427994 0.118644068 0.515151515 0.728813559 33 1 0 58 2R:15932396-15932502 6 34.5 1447 FBgn0015247 770.1333333 45.09 68.51666667 0.044797438 0.765136394 0.503527122 -9 -9 -9 0.01 dme-miR-1012-3p 6mer2-7 TGACTA 2R 15936199 15936204 - 2R_15936199_15936204_- 0.999999987 0.999999746 0.999999866 2.12E-07 Mlf FBtr0087292|FBtr0306650|FBtr0302149|FBtr0087294|FBtr0087295|FBtr0087293|FBtr0306649 15935891|15935891|15935891|15935891|15935891|15935891|15936089 15936459|15936459|15937286|15936459|15936459|15938254|15936459 2R - 15936183 15936256 3'utr Mlf FlyBase G23841.1 GATGTGCACGCAGGATACAGAACAACTTGCTTAAATTTACTTAAAACAAATGTGACTATTCAACGCCGAAATCA 26 15936199 0.675114678 9 23 128 0.931034483 1.431363764 0.275862069 0.076923077 0.172413793 26 2 0 27 2R:15936183-15936256 6 Mlf FBtr0087293|FBtr0306649|FBtr0087294|FBtr0087295|FBtr0306650|FBtr0302149|FBtr0087292 15935891|15936089|15935891|15935891|15935891|15935891|15935891 15938254|15936459|15936459|15936459|15936459|15937286|15936459 TGACTA 6mer2-7 dme-miR-1012-3p 2R - 15936182 15936256 3'utr Mlf FlyBase G18057.1 GATGTGCACGCAGGATACAGAACAACTTGCTTAAATTTACTTAAAACAAATGTGACTATTCAACGCCGAAATCAT 15 15936200 0.960857502 6 14 75 1 1.431363764 0.222222222 0.666666667 0.814814815 15 0 0 27 2R:15936182-15936256 6 14.5 1448 FBgn0034051 2421.99 180.2466667 275.5966667 0.005986812 0.080445316 0.052613118 -5 -4 -4.5 0.01 dme-miR-970-3p 6mer3-8 TCTTAT 2R 15936314 15936319 - 2R_15936314_15936319_- 1 1 1 0 Mlf FBtr0087292|FBtr0306650|FBtr0302149|FBtr0087294|FBtr0087295|FBtr0087293|FBtr0306649 15935891|15935891|15935891|15935891|15935891|15935891|15936089 15936459|15936459|15937286|15936459|15936459|15938254|15936459 2R - 15936305 15936346 3'utr Mlf FlyBase G23842.1 AACAAACACAATTCTTTACCAGTTCTGTCTTATCCTGCGTGA 14 15936324 0.947104158 5 9 127 0.777777778 0.84509804 0 0.142857143 0.333333333 14 3 1 14 2R:15936305-15936346 6 Mlf FBtr0087293|FBtr0306649|FBtr0087294|FBtr0087295|FBtr0306650|FBtr0302149|FBtr0087292 15935891|15936089|15935891|15935891|15935891|15935891|15935891 15938254|15936459|15936459|15936459|15936459|15937286|15936459 TCTTAT 6mer3-8 dme-miR-970-3p 2R - 15936304 15936337 3'utr Mlf FlyBase G18058.1 AATTCTTTACCAGTTCTGTCTTATCCTGCGTGAG 10 15936317 0.606502231 3 10 91 1 1.146128036 0 0.4 0.571428571 10 0 0 14 2R:15936304-15936337 6 11 1449 FBgn0034051 2421.99 180.2466667 275.5966667 0.00454172 0.061027481 0.0399134 5 -2 1.5 0.01 dme-miR-7-5p 6mer3-8 GTCTTC 2R 15937182 15937187 - 2R_15937182_15937187_- 1 1 1 0 Mlf FBtr0306651|FBtr0302149 15936692|15935891 15937286|15937286 2R - 15937145 15937210 3'utr Mlf FlyBase G23844.1 CGAGAAACACTCGACATTCGGCTGTCTTCGACGTAACTACATGCACTCTACTAACCGAAGGCGCCA 11 15937184 0.971439361 5 11 63 1 1.176091259 0.266666667 0.363636364 0.533333333 11 0 0 15 2R:15937145-15937210 6 Mlf FBtr0302149|FBtr0306651 15935891|15936692 15937286|15937286 GTCTTC 6mer3-8 dme-miR-7-5p 2R - 15937153 15937209 3'utr Mlf FlyBase G18060.1 GAGAAACACTCGACATTCGGCTGTCTTCGACGTAACTACATGCACTCTACTAACCGA 9 15937184 0.975207404 4 8 51 0.923076923 1.079181246 0.153846154 0.333333333 0.538461538 9 1 0 12 2R:15937153-15937209 6 8.5 1450 FBgn0034051 2421.99 180.2466667 275.5966667 0.003509511 0.047157599 0.030842173 -3 -3 -3 0.01 dme-miR-252-5p 7mer-m8 GTACTTA 2R 15989698 15989704 - 2R_15989698_15989704_- 0.588299913 0.588299917 0.588299915 0 CG8314 FBtr0087268 15989681 15989940 2R - 15989685 15989736 3'utr CG8314 FlyBase G23862.1 AAATATCCATTTCCGTGGCCGGGTGAAGATGTGTACTTACCTGACAGCCCTA 21 15989702 0.973605614 4 20 126 1 1.397940009 0.36 0.19047619 0.32 21 0 0 25 2R:15989685-15989736 7 CG8314 FBtr0087268 15989681 15989940 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 15989683 15989727 3'utr CG8314 FlyBase G18068.1 TTTCCGTGGCCGGGTGAAGATGTGTACTTACCTGACAGCCCTACT 17 15989705 0.706773237 6 16 109 0.896551724 1.414973348 0.344827586 0.529411765 0.724137931 17 3 0 26 2R:15989683-15989727 7 17.5 1451 FBgn0034057 362 35.10666667 54.10333333 0.048342541 0.49848082 0.323455117 -2 1 -0.5 0.01 dme-miR-277-3p 6mer2-7 GCATTT 2R 15993562 15993567 + 2R_15993562_15993567_+ 1 1 1 0 CG8320 FBtr0087202 15993411 15993707 2R + 15993543 15993586 3'utr CG8320 FlyBase G16234.1 ATTGTTTTAGTTAGTCAAAGCATTTGTGCGATTTAATTGCGGTG 14 15993567 0.725176804 5 13 132 0.933333333 0.84509804 0.266666667 0.071428571 0.133333333 14 0 1 14 2R:15993543-15993586 6 CG8320 FBtr0087202 15993411 15993707 GCATTT 6mer2-7 dme-miR-277-3p 2R + 15993543 15993580 3'utr CG8320 FlyBase G12325.1 ATTGTTTTAGTTAGTCAAAGCATTTGTGCGATTTAATT 8 15993566 0.853755233 3 8 74 1 1.204119983 0 0.5 0.75 8 0 0 16 2R:15993543-15993580 6 11 1452 FBgn0034059 68.78 8.71 13.22666667 0.159930212 1.262916188 0.831653226 -5 -4 -4.5 0.01 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 15994019 15994026 - 2R_15994019_15994026_- 0.625364269 0.625364269 0.625364269 0 ATPCL FBtr0340016|FBtr0300598|FBtr0300596|FBtr0300597 15993801|15993801|15993801|15993529 15994227|15994227|15994227|15994227 2R - 15994016 15994065 3'utr ATPCL FlyBase G23871.1 ATGTGACTCTCCCCAGATCCCTTTCCCTCTCACTTATCCTGCATTTAAAG 46 15994043 0.722097029 8 45 386 0.981132075 1.716003344 0.20754717 0.130434783 0.245283019 46 1 0 52 2R:15994016-15994065 8 ATPCL FBtr0300597|FBtr0300596|FBtr0300598|FBtr0340016 15993529|15993801|15993801|15993801 15994227|15994227|15994227|15994227 TGCATTTA 8mer-A1 dme-miR-277-3p 2R - 15993928 15994069 3'utr ATPCL FlyBase G18075.1 GCGCATGTGACTCTCCCCAGATCCCTTTCCCTCTCACTTATCCTGCATTTAAAGTTCTTAAGTTACCATCATTACCCTCGTTGTTTTTGTAAGCGCTGCGTGTCCCCGGAGCCCTTAGGGGTTTTGGAATCTAGACCTAGTT 35 15994043 0.984142526 16 32 257 0.942307692 1.389166084 0.25 0.382352941 0.596153846 34 2 1 49 2R:15993928-15994069 8 9 1453 FBgn0020236 1766.27 52.70333333 80.88666667 0.005095484 0.170767187 0.111266793 17 17 17 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 2R 15994141 15994146 - 2R_15994141_15994146_- 1 1 1 0 ATPCL FBtr0340016|FBtr0300598|FBtr0300596|FBtr0300597 15993801|15993801|15993801|15993529 15994227|15994227|15994227|15994227 2R - 15994111 15994160 3'utr ATPCL FlyBase G23872.1 TCGGAAGTTGTTGTAGTTAAGCACAGATGTATGATGTTAGGCAAAGAGGT 13 15994150 0.943904136 5 12 76 1 1.176091259 0.266666667 0.153846154 0.266666667 13 0 0 15 2R:15994111-15994160 6 ATPCL FBtr0300597|FBtr0300596|FBtr0300598|FBtr0340016 15993529|15993801|15993801|15993801 15994227|15994227|15994227|15994227 AGTTAA 6mer3-8 dme-miR-999-3p 2R - 15994102 15994164 3'utr ATPCL FlyBase G18076.1 TTATTCGGAAGTTGTTGTAGTTAAGCACAGATGTATGATGTTAGGCAAAGAGGTCACCCGCTC 11 15994124 0.776302388 5 10 74 1 1.176091259 0.333333333 0.272727273 0.466666667 11 0 0 15 2R:15994102-15994164 6 7.5 1454 FBgn0020236 1766.27 52.70333333 80.88666667 0.004246236 0.14230599 0.092722328 4 -22 -9 0.01 dme-bantam-3p 6mer3-8 TGATCT 2R 16006847 16006852 + 2R_16006847_16006852_+ 1 1 1 0 CG8370 FBtr0087203|FBtr0340015 16006745|16006745 16006901|16006901 2R + 16006823 16006888 3'utr CG8370 FlyBase G16244.2 ACGCGACGATGGAGGAACGCTGAATGATCTTTTCCAATTTGACTTTTGACTAATAAACGCAAAGAT 85 16006847 0.744385576 11 82 600 0.944954128 2.012837225 0.064220183 0.235294118 0.403669725 85 6 0 103 2R:16006823-16006888 6 CG8370 FBtr0087203|FBtr0340015 16006745|16006745 16006901|16006901 TGATCT 6mer3-8 dme-bantam-3p 2R + 16006824 16006884 3'utr CG8370 FlyBase G12328.1 CGCGACGATGGAGGAACGCTGAATGATCTTTTCCAATTTGACTTTTGACTAATAAACGCAA 55 16006847 0.768294812 11 54 380 0.988372093 1.62838893 0.034883721 0.454545455 0.651162791 55 0 1 85 2R:16006824-16006884 6 57 1455 FBgn0034060 699.34 15.97 24.45666667 0.081505419 3.569192235 2.330652855 0 0 0 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 2R 16013588 16013593 + 2R_16013588_16013593_+ 0.999999988 0.999986665 0.999993326 9.40E-06 CG8389 FBtr0087205|FBtr0087204 16013535|16013535 16013815|16013815 2R + 16013563 16013625 3'utr CG8389 FlyBase G16250.1 AGAGTTTAAGCGAAGGATATCGGTATTGACTGTCATGTGATAGGCGATGAAATGACTTCCCCG 96 16013593 0.983404927 11 81 626 0.833333333 1.301029996 0.416666667 0.21875 0.375 96 16 4 100 2R:16013563-16013625 6 CG8389 FBtr0087205|FBtr0087204 16013535|16013535 16013815|16013815 TTGACT 6mer3-8 dme-miR-1012-3p 2R + 16013562 16013617 3'utr CG8389 FlyBase G12334.1 AAGAGTTTAAGCGAAGGATATCGGTATTGACTGTCATGTGATAGGCGATGAAATGA 56 16013594 0.979146763 10 53 366 0.933333333 1.447158031 0.355555556 0.428571429 0.644444444 56 4 2 84 2R:16013562-16013617 6 72.5 1456 FBgn0034063 106.9966667 6.81 10.28666667 0.677591202 10.64610866 7.047958522 -5 -6 -5.5 0.01 dme-miR-307a-3p 7mer-A1 GTTGTGA 2R 16013663 16013669 + 2R_16013663_16013669_+ 0.823349562 0.823349547 0.823349555 7.07E-08 CG8389 FBtr0087205|FBtr0087204 16013535|16013535 16013815|16013815 2R + 16013635 16013681 3'utr CG8389 FlyBase G16251.1 TTCCACTCTCGCCGCAGTAGTTATCTGAGTTGTGAGGAAGGACCAGT 10 16013658 0.971705354 6 10 62 1 1.079181246 0.416666667 0.1 0.25 10 0 0 12 2R:16013635-16013681 7 CG8389 FBtr0087205|FBtr0087204 16013535|16013535 16013815|16013815 GTTGTGA 7mer-A1 dme-miR-307a-3p 2R + 16013635 16013687 3'utr CG8389 FlyBase G12335.1 TTCCACTCTCGCCGCAGTAGTTATCTGAGTTGTGAGGAAGGACCAGTGTCAGG 9 16013660 0.96877785 6 9 53 1 1.146128036 0.5 0.444444444 0.642857143 9 0 0 14 2R:16013635-16013687 7 8 1457 FBgn0034063 106.9966667 6.81 10.28666667 0.074768684 1.174743025 0.777705768 5 3 4 0.01 dme-miR-34-5p 7mer-A1 ACTGCCA 2R 16013773 16013779 + 2R_16013773_16013779_+ 0.822681185 0.82327094 0.822976063 0.000416981 CG8389 FBtr0087205|FBtr0087204 16013535|16013535 16013815|16013815 2R + 16013750 16013792 3'utr CG8389 FlyBase G16252.1 TAGCCCCTAGACCTAACTTTTGTACTGCCATAAGAGCCAAAAT 20 16013770 0.915043189 7 19 143 0.956521739 1.041392685 0.043478261 0.15 0.260869565 20 0 1 22 2R:16013750-16013792 7 CG8389 FBtr0087205|FBtr0087204 16013535|16013535 16013815|16013815 ACTGCCA 7mer-A1 dme-miR-34-5p 2R + 16013749 16013789 3'utr CG8389 FlyBase G12336.1 TTAGCCCCTAGACCTAACTTTTGTACTGCCATAAGAGCCAA 15 16013770 0.785004705 5 14 109 0.952380952 1.301029996 0.047619048 0.333333333 0.523809524 15 1 0 20 2R:16013749-16013789 7 17 1458 FBgn0034063 106.9966667 6.81 10.28666667 0.158883454 2.496328928 1.652624757 3 3 3 0.01 dme-miR-79-3p 8mer-A1 TAGCTTTA 2R 16060133 16060140 + 2R_16060133_16060140_+ 0.625364009 0.625364009 0.625364009 0 CG8405 FBtr0340020 16059325 16060835 2R + 16060091 16060163 3'utr CG8405 FlyBase G16263.1 GCCTCCACTGATGCTTCTACTGTTTGCCCAAGCTCTTTGCTTTAGCTTTATGGAATACCATAGGATTGTCAAC 11 16060130 0.991243007 5 9 103 0.9375 1.176091259 0.125 0.272727273 0.5 11 1 0 15 2R:16060091-16060163 8 CG8405 FBtr0340020 16059325 16060835 TAGCTTTA 8mer-A1 dme-miR-79-3p 2R + 16060100 16060174 3'utr CG8405 FlyBase G12340.2 GATGCTTCTACTGTTTGCCCAAGCTCTTTGCTTTAGCTTTATGGAATACCATAGGATTGTCAACTGTAATATATT 11 16060132 0.985149209 7 11 114 1 1.113943352 0.461538462 0.181818182 0.307692308 11 0 0 13 2R:16060100-16060174 8 7 1459 FBgn0034071 1286.916667 39.81333333 61.00666667 0.005439358 0.175820496 0.114741558 3 1 2 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 16060256 16060261 + 2R_16060256_16060261_+ 1 1 1 0 CG8405 FBtr0340020|FBtr0340020|FBtr0340020 16059325|16059325|16059325 16060835|16060835|16060835 2R + 16060246 16060289 3'utr CG8405 FlyBase G16264.1 AGGAAACACACTGTGAATATTCATGAGAAATTGCCGTTGAACGT 9 16060264 0.953622573 3 8 38 1 0.954242509 0 0 0 9 0 0 9 2R:16060246-16060289 6 CG8405 FBtr0340020|FBtr0340020|FBtr0340020 16059325|16059325|16059325 16060835|16060835|16060835 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 16060233 16060267 3'utr CG8405 FlyBase G12341.1 AAAGCCATCACAAAGGAAACACACTGTGAATATTC 6 16060263 0.950266638 2 6 25 1 1.113943352 0 0.666666667 0.846153846 6 0 0 13 2R:16060233-16060267 6 6.5 1460 FBgn0034071 1286.916667 39.81333333 61.00666667 0.005050832 0.163261889 0.106545733 -8 -7 -7.5 0.01 dme-miR-980-3p 8mer-A1 GGCAGCTA 2R 16082658 16082665 - 2R_16082658_16082665_- 0.668734347 0.668734347 0.668734347 0 Dg FBtr0306238|FBtr0087256|FBtr0087258|FBtr0087257 16081174|16081665|16081665|16081665 16083271|16083271|16083271|16083271 2R - 16082618 16082676 3'utr Dg FlyBase G23943.1 CCACGTCCCTGGGCAGCTATTAGACTTTCAGCTTGATTTGCTCAAGCTGAATTGCTTGC 31 16082657 0.841091109 6 29 179 0.947368421 1.255272505 0.236842105 0.193548387 0.342105263 31 1 1 36 2R:16082618-16082676 8 Dg FBtr0087258|FBtr0087257|FBtr0306238|FBtr0087256 16081665|16081665|16081174|16081665 16083271|16083271|16083271|16083271 GGCAGCTA 8mer-A1 dme-miR-980-3p 2R - 16082619 16082676 3'utr Dg FlyBase G18123.1 CCACGTCCCTGGGCAGCTATTAGACTTTCAGCTTGATTTGCTCAAGCTGAATTGCTTG 28 16082657 0.739482349 6 26 155 0.944444444 1.531478917 0.027777778 0.285714286 0.444444444 28 2 0 34 2R:16082619-16082676 8 25.5 1461 FBgn0034072 2596.65 61.60333333 94.99 0.009820345 0.41393864 0.26844931 -8 -8 -8 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 2R 16082709 16082714 - 2R_16082709_16082714_- 1 1 1 0 Dg FBtr0306238|FBtr0087256|FBtr0087258|FBtr0087257 16081174|16081665|16081665|16081665 16083271|16083271|16083271|16083271 2R - 16082692 16082726 3'utr Dg FlyBase G23944.1 GTACTAAAATTAAGTTAAACGCGAGAAAGAAGGCA 9 16082712 0.931765806 3 7 27 0.888888889 0.903089987 0.111111111 0 0 9 1 0 8 2R:16082692-16082726 6 Dg FBtr0087258|FBtr0087257|FBtr0306238|FBtr0087256 16081665|16081665|16081174|16081665 16083271|16083271|16083271|16083271 AGTTAA 6mer3-8 dme-miR-999-3p 2R - 16082693 16082724 3'utr Dg FlyBase G18124.1 ACTAAAATTAAGTTAAACGCGAGAAAGAAGGC 5 16082711 0.961968141 2 3 14 0.857142857 0.77815125 0.285714286 0.4 0.571428571 5 1 0 6 2R:16082693-16082724 6 6.5 1462 FBgn0034072 2596.65 61.60333333 94.99 0.002503225 0.105513771 0.068428256 -2 -3 -2.5 0.01 dme-miR-1007-3p 6mer3-8 TGAGCT 2R 16106266 16106271 + 2R_16106266_16106271_+ 1 1 1 0 Rho1 FBtr0087214|FBtr0087216|FBtr0087211|FBtr0087212|FBtr0087213|FBtr0087217 16106050|16106050|16106050|16106050|16106050|16106050 16106489|16107229|16106489|16107229|16107229|16107229 2R + 16106238 16106377 3'utr Rho1 FlyBase G16277.1 AACAAACATGAGCAGAAAACAGAGAGCTTGAGCTAGAAGATCAGCGGAGGAGGGATGCAGCGAGATATAAGGGAAGGCAGCACCAAGTAGAATGTCAAATGCGGATTTGATTTTATATACAGTCTAGTGTAGTTATAAAC 33 16106278 0.960980034 16 32 156 0.975609756 1.602059991 0.341463415 0.151515152 0.317073171 33 1 0 40 2R:16106238-16106377 6 Rho1 FBtr0087211|FBtr0087212|FBtr0087213|FBtr0087217|FBtr0087214|FBtr0087216 16106050|16106050|16106050|16106050|16106050|16106050 16106489|16107229|16107229|16107229|16106489|16107229 TGAGCT 6mer3-8 dme-miR-1007-3p 2R + 16106257 16106303 3'utr Rho1 FlyBase G12353.1 CAGAGAGCTTGAGCTAGAAGATCAGCGGAGGAGGGATGCAGCGAGAT 11 16106278 0.906236215 3 11 18 1 1.176091259 0.466666667 0.363636364 0.533333333 11 0 0 15 2R:16106257-16106303 6 8 1463 FBgn0014020 13816.13667 1325.1 2048.813333 0.000579033 0.00603728 0.003904699 -12 -12 -12 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2R 16106360 16106365 + 2R_16106360_16106365_+ 1 1 1 0 Rho1 FBtr0087214|FBtr0087216|FBtr0087211|FBtr0087212|FBtr0087213|FBtr0087217 16106050|16106050|16106050|16106050|16106050|16106050 16106489|16107229|16106489|16107229|16107229|16107229 2R + 16106238 16106377 3'utr Rho1 FlyBase G16277.1 AACAAACATGAGCAGAAAACAGAGAGCTTGAGCTAGAAGATCAGCGGAGGAGGGATGCAGCGAGATATAAGGGAAGGCAGCACCAAGTAGAATGTCAAATGCGGATTTGATTTTATATACAGTCTAGTGTAGTTATAAAC 33 16106343 0.960980034 16 32 156 0.975609756 1.602059991 0.341463415 0.151515152 0.317073171 33 1 0 40 2R:16106238-16106377 6 Rho1 FBtr0087211|FBtr0087212|FBtr0087213|FBtr0087217|FBtr0087214|FBtr0087216 16106050|16106050|16106050|16106050|16106050|16106050 16106489|16107229|16107229|16107229|16106489|16107229 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 16106312 16106380 3'utr Rho1 FlyBase G12354.1 AGGCAGCACCAAGTAGAATGTCAAATGCGGATTTGATTTTATATACAGTCTAGTGTAGTTATAAACCGA 9 16106338 0.979705776 6 9 67 1 1.041392685 0 0.222222222 0.363636364 9 0 0 11 2R:16106312-16106380 6 4.5 1464 FBgn0014020 13816.13667 1325.1 2048.813333 0.000325706 0.00339597 0.002196393 17 22 19.5 0.01 dme-miR-980-5p 7mer-m1 AAAAACT 2R 16106418 16106424 + 2R_16106418_16106424_+ 0.765586663 0.765586663 0.765586663 0 Rho1 FBtr0087214|FBtr0087216|FBtr0087211|FBtr0087212|FBtr0087213|FBtr0087217 16106050|16106050|16106050|16106050|16106050|16106050 16106489|16107229|16106489|16107229|16107229|16107229 2R + 16106385 16106452 3'utr Rho1 FlyBase G16278.1 AACAACAGTAATAACTCTGGCATTATTATTTGTAAAAACTAGGGCAGAGCAGATCAATCAGTCAGCCA 11 16106402 0.979376616 9 11 71 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 2R:16106385-16106452 7 Rho1 FBtr0087211|FBtr0087212|FBtr0087213|FBtr0087217|FBtr0087214|FBtr0087216 16106050|16106050|16106050|16106050|16106050|16106050 16106489|16107229|16107229|16107229|16106489|16107229 AAAAACT 7mer-m1 dme-miR-980-5p 2R + 16106386 16106438 3'utr Rho1 FlyBase G12355.1 ACAACAGTAATAACTCTGGCATTATTATTTGTAAAAACTAGGGCAGAGCAGAT 6 16106403 0.967776752 4 5 32 1 1 0 0.5 0.7 6 0 0 10 2R:16106386-16106438 7 3.5 1465 FBgn0014020 13816.13667 1325.1 2048.813333 0.000253327 0.00264131 0.001708306 16 15 15.5 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 16106575 16106580 + 2R_16106575_16106580_+ 1 1 1 0 Rho1 FBtr0087216|FBtr0087212|FBtr0087213|FBtr0087217 16106050|16106050|16106050|16106050 16107229|16107229|16107229|16107229 2R + 16106556 16106623 3'utr Rho1 FlyBase G16280.1 GTTGTCAAGTGTAGAGTCGGCTGTGGCTGGACGAGATTGTGTCGTATGCGAGGGTGAGTGAGTCAGGT 12 16106572 0.982148918 6 9 66 0.769230769 0.698970004 0.692307692 0.083333333 0.153846154 12 2 1 10 2R:16106556-16106623 6 Rho1 FBtr0087212|FBtr0087213|FBtr0087217|FBtr0087216 16106050|16106050|16106050|16106050 16107229|16107229|16107229|16107229 GCTGTG 6mer2-7 dme-miR-1008-3p 2R + 16106531 16106592 3'utr Rho1 FlyBase G12357.1 TGTATGTTATTATTTCGTTAACTGTGTTGTCAAGTGTAGAGTCGGCTGTGGCTGGACGAGAT 6 16106565 0.970215811 3 6 46 1 1.113943352 0.615384615 0.5 0.769230769 6 0 0 13 2R:16106531-16106592 6 6.5 1466 FBgn0014020 13816.13667 1325.1 2048.813333 0.000470464 0.00490529 0.003172568 3 10 6.5 0.01 dme-miR-2a-2-5p 7mer-A1 GATGAGA 2R 16106703 16106709 + 2R_16106703_16106709_+ 0.782911824 0.782911824 0.782911824 0 Rho1 FBtr0087216|FBtr0087212|FBtr0087213|FBtr0087217 16106050|16106050|16106050|16106050 16107229|16107229|16107229|16107229 2R + 16106650 16106732 3'utr Rho1 FlyBase G16281.1 GGAAACGGAATCGGATGTTGGATCCCGGGGTCCAAGGAGGTCGTAGGCGTCAAGATGAGAGTTATGTTCCCATTAAATCTATC 12 16106705 0.983969879 8 11 79 0.923076923 0.77815125 0.153846154 0.083333333 0.153846154 12 0 1 12 2R:16106650-16106732 7 Rho1 FBtr0087212|FBtr0087213|FBtr0087217|FBtr0087216 16106050|16106050|16106050|16106050 16107229|16107229|16107229|16107229 GATGAGA 7mer-A1 dme-miR-2a-2-5p 2R + 16106668 16106758 3'utr Rho1 FlyBase G12358.1 TGGATCCCGGGGTCCAAGGAGGTCGTAGGCGTCAAGATGAGAGTTATGTTCCCATTAAATCTATCAAATACAGAGAGACCAGGCCGCCAAT 12 16106714 0.975307998 5 10 72 1 1.255272505 0.111111111 0.416666667 0.611111111 12 0 0 18 2R:16106668-16106758 7 7.5 1467 FBgn0014020 13816.13667 1325.1 2048.813333 0.000542844 0.00565995 0.003660656 -2 -11 -6.5 0.01 dme-miR-304-5p 6mer3-8 TGAGAT 2R 16106859 16106864 + 2R_16106859_16106864_+ 1 0.615593548 0.807796774 0.271816443 Rho1 FBtr0087216|FBtr0087212|FBtr0087213|FBtr0087217 16106050|16106050|16106050|16106050 16107229|16107229|16107229|16107229 2R + 16106812 16106943 3'utr Rho1 FlyBase G16283.1 CAAAACAAAAACGATAAATGTTTATTTAACTAAACGTAAGCCACAAATGAGATGCATTCAGTTTTCGCGTGGGAGATGCTAAGAGGGAAAATTTTTGATGAAGTGAAAAACTATTTCGAGCGCATTAAGCGA 16 16106859 0.984561085 9 16 95 1 1.278753601 0 0.125 0.263157895 16 0 0 19 2R:16106812-16106943 6 Rho1 FBtr0087212|FBtr0087213|FBtr0087217|FBtr0087216 16106050|16106050|16106050|16106050 16107229|16107229|16107229|16107229 TGAGAT 6mer3-8 dme-miR-304-5p 2R + 16106838 16106916 3'utr Rho1 FlyBase G12359.1 TAACTAAACGTAAGCCACAAATGAGATGCATTCAGTTTTCGCGTGGGAGATGCTAAGAGGGAAAATTTTTGATGAAGTG 12 16106859 0.996731432 10 12 61 1 1.431363764 0.185185185 0.75 0.888888889 12 0 0 27 2R:16106838-16106916 6 5.5 1468 FBgn0014020 13816.13667 1325.1 2048.813333 0.000398085 0.00415063 0.002684481 0 0 0 0.01 dme-bantam-3p 6mer3-8 TGATCT 2R 16107213 16107218 + 2R_16107213_16107218_+ 1 1 1 0 Rho1 FBtr0087216|FBtr0087212|FBtr0087213|FBtr0087217 16106050|16106050|16106050|16106050 16107229|16107229|16107229|16107229 2R + 16107117 16107231 3'utr Rho1 FlyBase G16285.1 ACCGTCAATCGTGTAATTCTCACACAGAAGTTGAAAAACTCGAAGATGCATCAGATACAACCAAACTATATTATACTTATGAATAAACAGTACATTTGATCTACTCTTGGTTTAA 32 16107212 0.984671253 13 31 248 0.975609756 1.602059991 0.219512195 0.28125 0.43902439 32 1 0 40 2R:16107117-16107231 6 Rho1 FBtr0087212|FBtr0087213|FBtr0087217|FBtr0087216 16106050|16106050|16106050|16106050 16107229|16107229|16107229|16107229 TGATCT 6mer3-8 dme-bantam-3p 2R + 16107179 16107225 3'utr Rho1 FlyBase G12360.1 AAACTATATTATACTTATGAATAAACAGTACATTTGATCTACTCTTG 12 16107212 0.98813775 6 10 93 0.8 1.079181246 0.066666667 0.25 0.4 12 3 0 12 2R:16107179-16107225 6 15 1469 FBgn0014020 13816.13667 1325.1 2048.813333 0.001085687 0.0113199 0.007321311 1 1 1 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2R 16107496 16107501 - 2R_16107496_16107501_- 1 1 1 0 Ric FBtr0087254 16107438 16108756 2R - 16107462 16107512 3'utr Ric FlyBase G23955.1 CGAAAACGACATACCTGTTCGGGAATAATATTGTGAAACCTAATACCTAAT 19 16107495 0.822576001 4 15 102 0.826086957 0.977723605 0.260869565 0.210526316 0.347826087 19 3 1 19 2R:16107462-16107512 6 Ric FBtr0087254 16107438 16108756 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2R - 16107472 16107512 3'utr Ric FlyBase G18132.1 CGAAAACGACATACCTGTTCGGGAATAATATTGTGAAACCT 18 16107496 0.665813151 3 18 83 1 1.462397998 0.172413793 0.444444444 0.655172414 18 0 0 29 2R:16107472-16107512 6 13.5 1470 FBgn0265605 681.3433333 39.13333333 60.19 0.019813799 0.344974446 0.224289749 -6 -5 -5.5 0.01 dme-miR-980-5p 7mer-A1 AAAAACA 2R 16107759 16107765 - 2R_16107759_16107765_- 0.782911824 0.782911824 0.782911824 0 Ric FBtr0300576|FBtr0087254 16107675|16107438 16108756|16108756 2R - 16107724 16107803 3'utr Ric FlyBase G23956.1 AACACGGCTTTAATTACTCTGTTTGTTACATGATCCCAAAAAACAGTTGAATGGACTACCCATAATTACTAATAATTAAT 10 16107752 0.96354589 4 10 57 1 1 0.1 0 0 10 0 0 10 2R:16107724-16107803 7 Ric FBtr0300576|FBtr0087254 16107675|16107438 16108756|16108756 AAAAACA 7mer-A1 dme-miR-980-5p 2R - 16107738 16107783 3'utr Ric FlyBase G18133.1 GTTTGTTACATGATCCCAAAAAACAGTTGAATGGACTACCCATAAT 6 16107774 0.710540746 4 6 29 1 0.903089987 0.25 0.166666667 0.375 6 0 0 8 2R:16107738-16107783 7 6.5 1471 FBgn0265605 681.3433333 39.13333333 60.19 0.009539977 0.166098807 0.107991361 -13 9 -2 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 2R 16107996 16108002 - 2R_16107996_16108002_- 0.620204266 0.620204266 0.620204266 0 Ric FBtr0300576|FBtr0087254 16107675|16107438 16108756|16108756 2R - 16107979 16108038 3'utr Ric FlyBase G23957.2 AAGCCCAAATTGATAATTTAAGTCCACGACAGCCGATGCATTTGTTGTTTAAGTTTGAGA 36 16107998 0.840768139 6 35 227 0.957446809 1.653212514 0.085106383 0.222222222 0.404255319 36 2 0 45 2R:16107979-16108038 7 Ric FBtr0300576|FBtr0087254 16107675|16107438 16108756|16108756 TGCATTT 7mer-m8 dme-miR-277-3p 2R - 16107982 16108019 3'utr Ric FlyBase G18134.1 AAGTCCACGACAGCCGATGCATTTGTTGTTTAAGTTTG 31 16107998 0.664441808 5 31 157 1 1.716003344 0.057692308 0.483870968 0.692307692 31 0 0 52 2R:16107982-16108019 7 31.5 1472 FBgn0265605 681.3433333 39.13333333 60.19 0.046232198 0.804940375 0.523342748 -4 -4 -4 0.01 dme-miR-252-5p 6mer3-8 GTACTT 2R 16108556 16108561 - 2R_16108556_16108561_- 1 1 1 0 Ric FBtr0300576|FBtr0087254 16107675|16107438 16108756|16108756 2R - 16108441 16108564 3'utr Ric FlyBase G23959.1 AAAGTACTTGTTGTTGGCCGGAAAGGATAGCGAGGCAGTAGATCAGCGATAGAGTATATCAATACGTTTAAGCACCGATCCAAAAGATACATATTAACAATGCACGTACATATGTTTATGTAGT 21 16108550 0.966670542 9 20 110 0.952380952 1.301029996 0.238095238 0 0 21 1 0 20 2R:16108441-16108564 6 Ric FBtr0300576|FBtr0087254 16107675|16107438 16108756|16108756 GTACTT 6mer3-8 dme-miR-252-5p 2R - 16108519 16108559 3'utr Ric FlyBase G18135.1 ACTTGTTGTTGGCCGGAAAGGATAGCGAGGCAGTAGATCAG 7 16108550 0.85047612 2 6 27 0.888888889 0.903089987 0.222222222 0.285714286 0.444444444 7 1 0 8 2R:16108519-16108559 4 5.5 1473 FBgn0265605 681.3433333 39.13333333 60.19 0.008072289 0.140545145 0.091377305 -11 -11 -11 0.01 dme-miR-278-3p 7mer-A1 CCACCGA 2R 16136242 16136248 + 2R_16136242_16136248_+ 0.823349562 0.823349562 0.823349562 0 spin FBtr0089589 16136204 16138238 2R + 16136217 16136254 3'utr spin FlyBase G16292.1 AAGAACCCCAGCGACTCTGGACTGACCACCGAGCTGCG 12 16136234 0.903867761 3 11 34 0.916666667 1.041392685 0.5 0 0 12 1 0 11 2R:16136217-16136254 7 spin FBtr0089589 16136204 16138238 CCACCGA 7mer-A1 dme-miR-278-3p 2R + 16136208 16136259 3'utr spin FlyBase G12364.1 CACCTGCACAAGAACCCCAGCGACTCTGGACTGACCACCGAGCTGCGAAGCA 13 16136234 0.874094546 4 13 33 1 1.204119983 0.625 0.230769231 0.375 13 0 0 16 2R:16136208-16136259 7 11.5 1474 FBgn0086676 4918.906667 189.3433333 292.6266667 0.002337918 0.060736229 0.039299221 8 8 8 0.01 dme-miR-277-3p 7mer-A1 GCATTTA 2R 16141707 16141713 + 2R_16141707_16141713_+ 0.823349562 0.823349562 0.823349562 0 Got1 FBtr0087231|FBtr0087232 16141592|16141592 16141928|16141928 2R + 16141672 16141794 3'utr Got1 FlyBase G16301.2 ATCCCAAAGCTGGATCACAGATGTCTGCACCATTGGCATTTAAATCAAACCAACAACAATTGCAATTACTAAACGTTTATACGCGGCTTTTAGATGGATATACACATATTATACACCGGAAAC 69 16141705 0.980309831 15 66 466 0.975 1.892094603 0.0875 0.130434783 0.25 69 2 0 78 2R:16141672-16141794 7 Got1 FBtr0087231|FBtr0087232 16141592|16141592 16141928|16141928 GCATTTA 7mer-A1 dme-miR-277-3p 2R + 16141678 16141768 3'utr Got1 FlyBase G12377.1 AAGCTGGATCACAGATGTCTGCACCATTGGCATTTAAATCAAACCAACAACAATTGCAATTACTAAACGTTTATACGCGGCTTTTAGATGG 29 16141705 0.918595857 8 29 185 1 1.672097858 0.063829787 0.413793103 0.638297872 29 0 0 47 2R:16141678-16141768 7 27 1475 FBgn0001124 622.6666667 44.53666667 67.53 0.043361884 0.606242048 0.399822301 2 2 2 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT 2R 16145990 16145996 - 2R_16145990_16145996_- 0.658722863 0.658939875 0.658831369 0.000153442 Ext2 FBtr0100513 16145902 16146381 2R - 16145970 16146010 3'utr Ext2 FlyBase G23963.1 TAGGTCGTAATATTGGCAGCTTTTATCTAGACTTTATTTTG 118 16145997 0.783795038 12 103 1142 0.892307692 1.023065304 0.192307692 0.093220339 0.176923077 118 4 10 116 2R:16145970-16146010 7 Ext2 FBtr0100513 16145902 16146381 GGCAGCT 7mer-m8 dme-miR-980-3p 2R - 16145911 16146010 3'utr Ext2 FlyBase G18137.1 TAGGTCGTAATATTGGCAGCTTTTATCTAGACTTTATTTTGATTTTAAATCAATAATTTAAAAAACTGAAACTGGCCTGTAAATAAGAATTAAAATAATC 112 16145998 0.989554471 18 99 985 0.883040936 1.224734438 0.105263158 0.375 0.590643275 112 12 8 151 2R:16145911-16146010 7 98.5 1476 FBgn0029175 123.3333333 5.64 8.726666667 0.798648649 17.46453901 11.28724217 1 2 1.5 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 2R 16146150 16146155 - 2R_16146150_16146155_- 0.999999426 0.998822233 0.99941083 0.000832406 Ext2 FBtr0100513 16145902 16146381 2R - 16146096 16146161 3'utr Ext2 FlyBase G23965.1 ATTCTTTTGACTTCTCATTGGTACTCAAAAATCCAATTATTCCGTTTGGATTCTCACGTATTTGTC 25 16146144 0.985861528 8 24 215 0.964285714 1.431363764 0.142857143 0.12 0.214285714 25 1 0 27 2R:16146096-16146161 6 Ext2 FBtr0100513 16145902 16146381 TTGACT 6mer3-8 dme-miR-1012-3p 2R - 16146128 16146177 3'utr Ext2 FlyBase G18138.1 AGGCAGGTCCGGTTGTATTCTTTTGACTTCTCATTGGTACTCAAAAATCC 15 16146143 0.746474612 7 14 134 0.896551724 1.414973348 0.379310345 0.4 0.689655172 15 3 0 26 2R:16146128-16146177 6 18 1477 FBgn0029175 123.3333333 5.64 8.726666667 0.145945946 3.191489362 2.062643239 -11 -12 -11.5 0.01 dme-bantam-3p 6mer2-7 GATCTC 2R 16146227 16146232 - 2R_16146227_16146232_- 1 1 1 0 Ext2 FBtr0100513 16145902 16146381 2R - 16146202 16146247 3'utr Ext2 FlyBase G23966.1 AGGCCAACTTATCTGGATCTCGCTTAGAAAATCAATTTCGTCATTG 22 16146235 0.631600099 8 20 139 0.925925926 0.920818754 0.111111111 0.227272727 0.37037037 22 0 2 25 2R:16146202-16146247 6 Ext2 FBtr0100513 16145902 16146381 GATCTC 6mer2-7 dme-bantam-3p 2R - 16146203 16146290 3'utr Ext2 FlyBase G18139.1 AATGTTCGTTTATATCATAGCAATACCTTCTTAACGGATAAAGAGGCCAACTTATCTGGATCTCGCTTAGAAAATCAATTTCGTCATT 11 16146224 0.987250248 6 10 82 0.95 1.278753601 0.05 0.636363636 0.8 11 1 0 19 2R:16146203-16146290 6 12 1478 FBgn0029175 123.3333333 5.64 8.726666667 0.097297297 2.127659574 1.375095493 3 -8 -2.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 2R 16146326 16146333 - 2R_16146326_16146333_- 0.64356572 0.64356572 0.64356572 0 Ext2 FBtr0100513 16145902 16146381 2R - 16146321 16146357 3'utr Ext2 FlyBase G23967.1 TTCCAGAGGAACCTATGCAGATATACCAAAGACTTCT 29 16146334 0.903560685 3 28 134 0.971428571 1.531478917 0.228571429 0.206896552 0.342857143 29 1 0 34 2R:16146321-16146357 8 Ext2 FBtr0100513 16145902 16146381 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 16146321 16146402 stop_codon Ext2 FlyBase G18140.1 AATGATATTGGTAGCTTATAAGGGTCCTTAGCTTTGAGGCCAACATTCCAGAGGAACCTATGCAGATATACCAAAGACTTCT 21 16146334 0.900705693 4 20 109 0.972222222 1.243038049 0.166666667 0.476190476 0.694444444 21 0 1 35 2R:16146321-16146402 8 21.5 1479 FBgn0029175 123.3333333 5.64 8.726666667 0.174324324 3.812056738 2.463712758 1 1 1 0.01 dme-miR-988-3p 6mer2-7 CAAGGG 2R 16183693 16183698 + 2R_16183693_16183698_+ 1 1 1 0 Lis-1 FBtr0087240|FBtr0087241|FBtr0304747|FBtr0087236 16183675|16183675|16183675|16183675 16185103|16185103|16183991|16185103 2R + 16183680 16183733 3'utr Lis-1 FlyBase G16359.1 AAGGAAGAATCGGCAAGGGTTCTGCTTACTTCTCAATTTAAACATAAATAAAGC 26 16183706 0.627784791 6 24 215 0.970588235 1.51851394 0.029411765 0.269230769 0.441176471 26 1 0 33 2R:16183680-16183733 6 Lis-1 FBtr0087236|FBtr0304747|FBtr0087241|FBtr0087240 16183675|16183675|16183675|16183675 16185103|16183991|16185103|16185103 CAAGGG 6mer2-7 dme-miR-988-3p 2R + 16183668 16183720 stop_codon Lis-1 FlyBase G12426.1 TGTCGTTAAATTAAGGAAGAATCGGCAAGGGTTCTGCTTACTTCTCAATTTAA 22 16183706 0.785535448 8 19 168 0.84 0.84509804 0.12 0.136363636 0.24 22 2 2 21 2R:16183668-16183720 6 20.5 1480 FBgn0015754 1628.096667 94.36 143.8866667 0.01259139 0.217253073 0.142473243 -13 -13 -13 0.01 dme-miR-190-5p 6mer3-8 ACATAT 2R 16183840 16183845 + 2R_16183840_16183845_+ 1 1 1 0 Lis-1 FBtr0087240|FBtr0087241|FBtr0304747|FBtr0087236 16183675|16183675|16183675|16183675 16185103|16185103|16183991|16185103 2R + 16183810 16183882 3'utr Lis-1 FlyBase G16360.1 CCAGACGCTTTCTGTGTCAGCGTAAAATGAACATATTGTATTTTAAAACTGAATGAAACTGGCGAAAACGAAT 21 16183862 0.966204157 10 20 101 0.961538462 1.397940009 0.307692308 0.19047619 0.346153846 21 1 0 25 2R:16183810-16183882 6 Lis-1 FBtr0087236|FBtr0304747|FBtr0087241|FBtr0087240 16183675|16183675|16183675|16183675 16185103|16183991|16185103|16185103 ACATAT 6mer3-8 dme-miR-190-5p 2R + 16183808 16183907 3'utr Lis-1 FlyBase G12427.1 TTCCAGACGCTTTCTGTGTCAGCGTAAAATGAACATATTGTATTTTAAAACTGAATGAAACTGGCGAAAACGAATTATTTATTTAATTGTACGACCTTCT 14 16183852 0.971962674 9 14 90 1 1.230448921 0.117647059 0.214285714 0.352941176 14 0 0 17 2R:16183808-16183907 6 6.5 1481 FBgn0015754 1628.096667 94.36 143.8866667 0.003992392 0.068885121 0.045174443 -22 -12 -17 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 2R 16183988 16183993 + 2R_16183988_16183993_+ 1 1 1 0 Lis-1 FBtr0087240|FBtr0087241|FBtr0087236 16183675|16183675|16183675 16185103|16185103|16185103 2R + 16183975 16184012 3'utr Lis-1 FlyBase G16361.1 GATTATCGTTTAAAGTTAATGCCGCCCTCCTTTATAAA 5 16183993 0.717100882 3 5 43 1 0.903089987 0 0.4 0.625 5 0 0 8 2R:16183975-16184012 6 Lis-1 FBtr0087236|FBtr0087241|FBtr0087240 16183675|16183675|16183675 16185103|16185103|16185103 AGTTAA 6mer3-8 dme-miR-999-3p 2R + 16183975 16184008 3'utr Lis-1 FlyBase G12428.1 GATTATCGTTTAAAGTTAATGCCGCCCTCCTTTA 5 16183993 0.73429486 3 5 34 1 0.954242509 0 0.6 0.777777778 5 0 0 9 2R:16183975-16184008 6 5 1482 FBgn0015754 1628.096667 94.36 143.8866667 0.003071071 0.052988554 0.034749571 -5 -5 -5 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 16184444 16184450 + 2R_16184444_16184450_+ 0.661615645 0.661615645 0.661615645 0 Lis-1 FBtr0087240|FBtr0087241|FBtr0087236 16183675|16183675|16183675 16185103|16185103|16185103 2R + 16184394 16184476 3'utr Lis-1 FlyBase G16363.1 GATAACAGTTTGCTTCTTTTAACCATATTCACTTTACACAATTCCTGTTTTGTGTTCTTTTTCGCGAAAGGATCTTCAACAAA 47 16184443 0.994858123 9 45 627 0.981818182 1.73239376 0.036363636 0.170212766 0.290909091 47 1 0 54 2R:16184394-16184476 7 Lis-1 FBtr0087236|FBtr0087241|FBtr0087240 16183675|16183675|16183675 16185103|16185103|16185103 TGTGTTC 7mer-m8 dme-miR-317-3p 2R + 16184409 16184460 3'utr Lis-1 FlyBase G12430.1 CTTTTAACCATATTCACTTTACACAATTCCTGTTTTGTGTTCTTTTTCGCGA 27 16184443 0.99430167 6 27 354 1 1.531478917 0.029411765 0.222222222 0.382352941 27 0 0 34 2R:16184409-16184460 7 34.5 1483 FBgn0015754 1628.096667 94.36 143.8866667 0.021190388 0.365621026 0.239772043 1 1 1 0.01 dme-miR-33-5p 7mer-m8 CAATGCA 2R 16184972 16184978 + 2R_16184972_16184978_+ 0.674515173 0.67377485 0.674145012 0.000523471 Lis-1 FBtr0087240|FBtr0087241|FBtr0087236 16183675|16183675|16183675 16185103|16185103|16185103 2R + 16184938 16184991 3'utr Lis-1 FlyBase G16366.1 AAAAAACAAAATGCGCACTAAAGCCACGACAACTCAATGCATAATTCGCAAAAC 10 16184971 0.918386417 4 10 33 1 1.041392685 0.272727273 0.1 0.181818182 10 0 0 11 2R:16184938-16184991 7 Lis-1 FBtr0087236|FBtr0087241|FBtr0087240 16183675|16183675|16183675 16185103|16185103|16185103 CAATGCA 7mer-m8 dme-miR-33-5p 2R + 16184956 16184985 3'utr Lis-1 FlyBase G12433.1 TAAAGCCACGACAACTCAATGCATAATTCG 5 16184979 0.944892381 4 4 18 0.857142857 0.77815125 0.428571429 0.4 0.571428571 5 1 0 6 2R:16184956-16184985 7 7 1484 FBgn0015754 1628.096667 94.36 143.8866667 0.004299499 0.074183976 0.0486494 1 -7 -3 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT 2R 16194249 16194255 - 2R_16194249_16194255_- 0.658999527 0.658999527 0.658999527 0 calypso FBtr0087245|FBtr0087246 16194060|16194060 16194434|16194434 2R - 16194231 16194291 3'utr calypso FlyBase G23979.1 ACTCAAATGCGGTTCTTTTAAATACGAAATCAACTTGGCAGCTTCATTTTTATTTGATCGC 175 16194257 0.832030415 6 172 1135 0.985148515 1.696793085 0.475247525 0.131428571 0.247524752 175 0 3 199 2R:16194231-16194291 7 calypso FBtr0087246|FBtr0087245 16194060|16194060 16194434|16194434 GGCAGCT 7mer-m8 dme-miR-980-3p 2R - 16194231 16194268 3'utr calypso FlyBase G18147.1 ACGAAATCAACTTGGCAGCTTCATTTTTATTTGATCGC 147 16194257 0.838331054 4 146 982 0.990990991 2.342422681 0.436936937 0.367346939 0.581081081 147 2 0 220 2R:16194231-16194268 7 159.5 1485 FBgn0262166 217.8466667 12.40333333 18.96 0.732166356 12.85944639 8.412447257 2 2 2 0.01 dme-miR-8-3p 7mer-m8 CAGTATT 2R 16194362 16194368 - 2R_16194362_16194368_- 0.661615243 0.661615243 0.661615243 0 calypso FBtr0087245|FBtr0087246 16194060|16194060 16194434|16194434 2R - 16194315 16194391 3'utr calypso FlyBase G23980.1 TGCATTTTTAAGACCATTCATTCCAGTATTGTTTTTCTACAATTTCCCCACCAAGAAGCACCATTAACCCATAAGAT 28 16194371 0.989152823 6 28 266 1 1.477121255 0.1 0.071428571 0.133333333 28 0 0 30 2R:16194315-16194391 7 calypso FBtr0087246|FBtr0087245 16194060|16194060 16194434|16194434 CAGTATT 7mer-m8 dme-miR-8-3p 2R - 16194335 16194392 3'utr calypso FlyBase G18148.1 TTGCATTTTTAAGACCATTCATTCCAGTATTGTTTTTCTACAATTTCCCCACCAAGAA 8 16194371 0.991667507 3 8 87 1 1.146128036 0.142857143 0.375 0.642857143 8 0 0 14 2R:16194335-16194392 7 15 1486 FBgn0262166 217.8466667 12.40333333 18.96 0.06885577 1.209352325 0.791139241 3 3 3 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 16197545 16197550 + 2R_16197545_16197550_+ 1 1 1 0 CG42837 FBtr0303860 16197515 16199378 2R + 16197505 16197560 stop_codon CG42837 FlyBase G16396.1 GCCACAGTCTAAAGTCCAGAGCGACCAAAGCCATTTAAAGACCAAAACGAATAGCG 8 16197538 0.883665675 3 7 16 0.888888889 0.903089987 0.555555556 0.125 0.222222222 8 1 0 8 2R:16197505-16197560 6 CG42837 FBtr0303860 16197515 16199378 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 16197499 16197566 stop_codon CG42837 FlyBase G12450.1 AAGAACGCCACAGTCTAAAGTCCAGAGCGACCAAAGCCATTTAAAGACCAAAACGAATAGCGTAGATA 5 16197556 0.957590216 3 4 18 0.875 0.84509804 0.125 0.4 0.625 5 1 0 7 2R:16197499-16197566 6 5 1487 FBgn0262026 104.31 5.966666667 9.106666667 0.047934043 0.837988827 0.549048316 7 -11 -2 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 2R 16198014 16198020 + 2R_16198014_16198020_+ 0.782911816 0.782910312 0.782911064 1.06E-06 CG42837 FBtr0303860 16197515 16199378 2R + 16197968 16198069 3'utr CG42837 FlyBase G16397.1 CGCAGTCCAGCGATGTGTTCACCAACCTCGCTCTAGAGGATTGGCTGTACAAAAACTTTGATTTCAGCCGCCACCATGTGCTGCTGCTGTGGGCCAACGACC 27 16198009 0.974301643 9 27 160 1 1.51851394 0.060606061 0.148148148 0.303030303 27 0 0 33 2R:16197968-16198069 7 CG42837 FBtr0303860 16197515 16199378 GTACAAA 7mer-A1 dme-miR-305-5p 2R + 16197939 16198052 3'utr CG42837 FlyBase G12451.1 TTCGGAGATCAAGAAGTCCGTGTTCATCTCGCAGTCCAGCGATGTGTTCACCAACCTCGCTCTAGAGGATTGGCTGTACAAAAACTTTGATTTCAGCCGCCACCATGTGCTGCT 14 16198025 0.980568834 7 13 90 0.888888889 0.77815125 0.222222222 0.571428571 0.777777778 14 0 3 24 2R:16197939-16198052 7 16 1488 FBgn0262026 104.31 5.966666667 9.106666667 0.153388937 2.681564246 1.756954612 5 -11 -3 0.01 dme-bantam-3p 6mer3-8 TGATCT 2R 16198185 16198190 + 2R_16198185_16198190_+ 1 1 1 0 CG42837 FBtr0303860 16197515 16199378 2R + 16198164 16198208 3'utr CG42837 FlyBase G16398.1 TGGCGGTGGAGCGGTGTACCATGATCTTGGGAACCTCAACTGCAC 12 16198185 0.840591683 3 11 65 0.857142857 1.079181246 0.214285714 0.166666667 0.285714286 12 2 0 12 2R:16198164-16198208 6 CG42837 FBtr0303860 16197515 16199378 TGATCT 6mer3-8 dme-bantam-3p 2R + 16198161 16198195 3'utr CG42837 FlyBase G12452.1 TAGTGGCGGTGGAGCGGTGTACCATGATCTTGGGA 8 16198185 0.742623543 4 8 49 1 1.204119983 0.3125 0.5 0.75 8 0 0 16 2R:16198161-16198195 6 8.5 1489 FBgn0262026 104.31 5.966666667 9.106666667 0.081487873 1.424581006 0.933382138 0 0 0 0.01 dme-miR-965-3p 7mer-m8 TACGCTT 2R 16198724 16198730 + 2R_16198724_16198730_+ 0.620204855 0.620204855 0.620204855 0 CG42837 FBtr0303860 16197515 16199378 2R + 16198698 16198742 3'utr CG42837 FlyBase G16399.1 TACGAGTATTTGAGAACGGCTGCAACTACGCTTGAAGACGGCGGC 6 16198724 0.902221087 2 6 19 1 0.954242509 0.222222222 0.5 0.666666667 6 0 0 9 2R:16198698-16198742 7 CG42837 FBtr0303860 16197515 16199378 TACGCTT 7mer-m8 dme-miR-965-3p 2R + 16198709 16198746 3'utr CG42837 FlyBase G12454.1 GAGAACGGCTGCAACTACGCTTGAAGACGGCGGCAGCA 5 16198724 0.89781642 2 5 15 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 2R:16198709-16198746 7 4.5 1490 FBgn0262026 104.31 5.966666667 9.106666667 0.043140638 0.754189944 0.494143485 0 0 0 0.01 dme-miR-277-3p 6mer3-8 TGCATT 2R 16199351 16199356 + 2R_16199351_16199356_+ 1 1 1 0 CG42837 FBtr0303860 16197515 16199378 2R + 16199318 16199372 3'utr CG42837 FlyBase G16402.1 TTACTTTTGTTACCACGTTTTATATAAAAGAACTGCATTAAATGTTTAAACATTG 22 16199341 0.983602483 6 21 168 0.956521739 1.342422681 0.086956522 0.045454545 0.086956522 22 1 0 22 2R:16199318-16199372 6 CG42837 FBtr0303860 16197515 16199378 TGCATT 6mer3-8 dme-miR-277-3p 2R + 16199333 16199370 3'utr CG42837 FlyBase G12456.1 CGTTTTATATAAAAGAACTGCATTAAATGTTTAAACAT 19 16199341 0.673189151 8 18 137 0.962962963 1.113943352 0 0.315789474 0.518518519 19 0 1 26 2R:16199333-16199370 6 20.5 1491 FBgn0262026 104.31 5.966666667 9.106666667 0.196529575 3.43575419 2.251098097 10 10 10 0.01 dme-miR-305-5p 6mer2-7 GTACAA 2R 16199546 16199551 - 2R_16199546_16199551_- 1 1 1 0 shark FBtr0087244 16199424 16199724 2R - 16199477 16199571 3'utr shark FlyBase G23983.1 AATATATTTTTTAATCATATGTACAACCAATTTGTGTCAAAAGAAAGCGAACAAGTGCCTTAAAGATTTAGCATATAAGCTTTGTATTCATTTTT 20 16199540 0.967516972 10 19 115 0.96 1.380211242 0.16 0.25 0.4 20 1 0 24 2R:16199477-16199571 6 shark FBtr0087244 16199424 16199724 GTACAA 6mer2-7 dme-miR-305-5p 2R - 16199490 16199568 3'utr shark FlyBase G18151.1 ATATTTTTTAATCATATGTACAACCAATTTGTGTCAAAAGAAAGCGAACAAGTGCCTTAAAGATTTAGCATATAAGCTT 13 16199540 0.976026467 5 12 81 0.933333333 1.146128036 0 0.153846154 0.266666667 13 1 0 14 2R:16199490-16199568 6 9 1492 FBgn0015295 248.9833333 9.48 14.51666667 0.036146998 0.949367089 0.619977038 -11 -11 -11 0.01 dme-miR-184-5p 6mer2-7 GATAAG 2R 16321091 16321096 - 2R_16321091_16321096_- 1 1 1 0 CG30096 FBtr0289994 16320813 16321126 2R - 16321043 16321120 3'utr CG30096 FlyBase G24055.1 TATGTATAAGTAAACTAAGCTGTAGATAAGTCTGAATATTATGAAAGTAAATGTTGTCTCTTGTATTTATTAAGTTAC 27 16321094 0.9867156 4 24 214 0.9 1.431363764 0.033333333 0.111111111 0.2 27 3 0 27 2R:16321043-16321120 6 CG30096 FBtr0289994 16320813 16321126 GATAAG 6mer2-7 dme-miR-184-5p 2R - 16321039 16321109 3'utr CG30096 FlyBase G18206.1 AAACTAAGCTGTAGATAAGTCTGAATATTATGAAAGTAAATGTTGTCTCTTGTATTTATTAAGTTACATTT 24 16321094 0.985629013 2 21 187 0.875 1.447158031 0.0625 0.333333333 0.5 24 4 0 28 2R:16321039-16321109 6 21.5 1493 FBgn0050096 38.66666667 4.263333333 6.543333333 0.556034483 5.043002346 3.285787061 -2 -2 -2 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 2R 16532631 16532636 + 2R_16532631_16532636_+ 1 1 1 0 Sema-2a FBtr0087089|FBtr0345339|FBtr0087090|FBtr0087088 16532399|16532399|16532399|16532399 16533428|16533428|16533428|16533459 2R + 16532523 16532698 5'utr Sema-2a FlyBase G16473.1 ATAATCATTATTATCAGCGACATCATCATAGACATACTTTCTTCAGCAATGAACAGAAAACTCTTCCTAAAGGATTATGCATTTACCGAAGCATTTACAATGCATCCATTGACTTAGACTTAGACATTAGGGTATTATCGCATGACACAGCTCCTCCCATACGGTGCAATTCACCC 30 16532632 0.979991457 14 29 205 0.974358974 1.579783597 0.102564103 0.266666667 0.435897436 30 1 0 38 2R:16532523-16532698 6 Sema-2a FBtr0087088|FBtr0087090|FBtr0345339|FBtr0087089 16532399|16532399|16532399|16532399 16533459|16533428|16533428|16533428 TTGACT 6mer3-8 dme-miR-1012-3p 2R + 16532621 16532679 5'utr Sema-2a FlyBase G12515.1 AATGCATCCATTGACTTAGACTTAGACATTAGGGTATTATCGCATGACACAGCTCCTCC 10 16532635 0.975327284 5 9 67 1 1.278753601 0.157894737 0.6 0.789473684 10 0 0 19 2R:16532621-16532679 6 9.5 1494 FBgn0011260 1008.703333 35.04333333 54.17 0.009418032 0.271092933 0.175373823 -1 -4 -2.5 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 16533360 16533367 + 2R_16533360_16533367_+ 0.500120318 0.500120318 0.500120318 0 Sema-2a FBtr0087089|FBtr0345339|FBtr0087090|FBtr0087088 16532399|16532399|16532399|16532399 16533428|16533428|16533428|16533459 2R + 16533334 16533379 5'utr Sema-2a FlyBase G16474.1 TGACTTGCACTCTCTTCACACTAAATGTACTTAAGGTAATTTGCAA 44 16533359 0.830129931 3 43 337 0.980392157 1.698970004 0.019607843 0.136363636 0.254901961 44 1 0 50 2R:16533334-16533379 8 Sema-2a FBtr0087088|FBtr0087090|FBtr0345339|FBtr0087089 16532399|16532399|16532399|16532399 16533459|16533428|16533428|16533428 GTACTTAA 8mer-A1 dme-miR-252-5p 2R + 16533329 16533428 5'utr Sema-2a FlyBase G12516.1 TTTAGTGACTTGCACTCTCTTCACACTAAATGTACTTAAGGTAATTTGCAAAAATCTTTAGTTCTTAAGCGTTTAGTTATAATAAAATGAGACAAAAACC 34 16533359 0.99907015 6 33 241 0.978723404 1.662757832 0 0.294117647 0.489361702 34 1 0 46 2R:16533329-16533428 8 34 1495 FBgn0011260 1008.703333 35.04333333 54.17 0.03370664 0.970227338 0.627653683 1 1 1 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT 2R 16585157 16585162 + 2R_16585157_16585162_+ 1 1 1 0 Cdk4 FBtr0340063|FBtr0345340|FBtr0087103|FBtr0087104|FBtr0087102 16585034|16585034|16585034|16585034|16585034 16585448|16585448|16585448|16585448|16585448 2R + 16584952 16585184 stop_codon Cdk4 FlyBase G16478.1 AAAATGCTTTCCTACGACCTCCACCTGCGACCATCCGCCTTGGCCTGTTTGGAGCACGATTACTTTCAGCAGGAACCCCTATAGTCTCGATGCCCAGAAGGATAATGGATAATGGATTATGGATTATGGATTATGGATTATGGATGTGGAAGTGAAAGTGGCAGTGGACTGATCATTGCGGCCGCGCTTCGTTCTTGTTACCAATGTTCCTTTAAGTGTAGTGAAGCATTTTG 172 16585156 0.870702173 30 169 1631 0.984615385 1.806179974 0.517948718 0.11627907 0.220512821 172 1 2 192 2R:16584952-16585184 6 Cdk4 FBtr0087102|FBtr0340063|FBtr0345340|FBtr0087103|FBtr0087104 16585034|16585034|16585034|16585034|16585034 16585448|16585448|16585448|16585448|16585448 GTTCCT 6mer2-7 dme-miR-276a-3p 2R + 16585129 16585180 3'utr Cdk4 FlyBase G12519.2 GCGGCCGCGCTTCGTTCTTGTTACCAATGTTCCTTTAAGTGTAGTGAAGCAT 81 16585157 0.709733468 7 79 839 0.992 1.792391689 0.368 0.382716049 0.6 81 0 1 124 2R:16585129-16585180 6 107 1496 FBgn0016131 414.8133333 26.95666667 40.80666667 0.25794735 3.969333498 2.622120569 1 0 0.5 0.01 dme-miR-34-5p 6mer2-7 ACTGCC 2R 16585285 16585290 + 2R_16585285_16585290_+ 0.999999997 0.544496394 0.772248195 0.322089684 Cdk4 FBtr0340063|FBtr0345340|FBtr0087103|FBtr0087104|FBtr0087102 16585034|16585034|16585034|16585034|16585034 16585448|16585448|16585448|16585448|16585448 2R + 16585257 16585337 3'utr Cdk4 FlyBase G16479.1 TTGTAGTCGTAAGTTAAGTGTGAATACTACTGCCGATCAACTATCTGATGACCATTACATGTGAAACGATTCTCGAGGGCG 26 16585284 0.719682314 10 24 139 0.966666667 1.462397998 0.233333333 0.153846154 0.266666667 26 1 0 29 2R:16585257-16585337 6 Cdk4 FBtr0087102|FBtr0340063|FBtr0345340|FBtr0087103|FBtr0087104 16585034|16585034|16585034|16585034|16585034 16585448|16585448|16585448|16585448|16585448 ACTGCC 6mer2-7 dme-miR-34-5p 2R + 16585254 16585325 3'utr Cdk4 FlyBase G12520.1 TGTTTGTAGTCGTAAGTTAAGTGTGAATACTACTGCCGATCAACTATCTGATGACCATTACATGTGAAACGA 16 16585284 0.79437325 6 14 88 0.941176471 1.204119983 0.058823529 0.0625 0.117647059 16 1 0 16 2R:16585254-16585325 6 15 1497 FBgn0016131 414.8133333 26.95666667 40.80666667 0.036160843 0.556448621 0.367586996 1 1 1 0.01 dme-miR-307a-3p 6mer3-8 GGTTGT 2R 16595344 16595349 - 2R_16595344_16595349_- 1 1 1 0 CG8303 FBtr0340064|FBtr0340065 16595026|16595026 16595419|16595419 2R - 16595317 16595350 3'utr CG8303 FlyBase G24095.1 TGGTTGTTCGTTTCCATCCGTAGTTTGTTCTAGT 10 16595339 0.789976009 2 9 105 0.923076923 1.079181246 0.307692308 0.2 0.384615385 10 1 0 12 2R:16595317-16595350 6 CG8303 FBtr0340064|FBtr0340065 16595026|16595026 16595419|16595419 GGTTGT 6mer3-8 dme-miR-307a-3p 2R - 16595317 16595367 3'utr CG8303 FlyBase G18236.1 TGCGATGCTACCACACATGGTTGTTCGTTTCCATCCGTAGTTTGTTCTAGT 10 16595339 0.732474973 3 10 108 1 1.322219295 0.047619048 0.8 0.904761905 10 0 0 21 2R:16595317-16595367 6 9.5 1498 FBgn0034143 4.333333333 0.25 0.39 2.192307692 38 24.35897436 -10 -10 -10 0.01 dme-miR-980-3p 6mer2-7 GCAGCT 2R 16791548 16791553 + 2R_16791548_16791553_+ 1 1 1 0 CG5522 FBtr0087030|FBtr0087029|FBtr0087031|FBtr0087028|FBtr0087026 16791350|16791350|16791350|16791350|16791350 16792472|16792472|16792472|16792472|16792472 2R + 16791477 16791638 3'utr CG5522 FlyBase G16511.1 ACATCGCTCACTCACTCCCTGAAACGAGGCAACCACAGAACATTCCCGCAACCACAACGAACGAACAAATTGCAGCTTGCATCAGATGAATCGATTTCAAAATGGTATTTCAAAAGACTGACACCGAATGAGAACACGAAGATATAGTAAAGGAGGAGCAGT 357 16791546 0.935187844 20 326 1563 0.920187793 1.639043558 0.241784038 0.145658263 0.284037559 357 26 8 392 2R:16791477-16791638 6 CG5522 FBtr0087026|FBtr0087031|FBtr0087028|FBtr0087030|FBtr0087029 16791350|16791350|16791350|16791350|16791350 16792472|16792472|16792472|16792472|16792472 GCAGCT 6mer2-7 dme-miR-980-3p 2R + 16791435 16791628 3'utr CG5522 FlyBase G12555.2 CCTTGAAACGTGCACAGCCAAAAAAAAAAACACCCACCCACCACATCGCTCACTCACTCCCTGAAACGAGGCAACCACAGAACATTCCCGCAACCACAACGAACGAACAAATTGCAGCTTGCATCAGATGAATCGATTTCAAAATGGTATTTCAAAAGACTGACACCGAATGAGAACACGAAGATATAGTAAAG 275 16791547 0.964070358 18 243 1174 0.886419753 1.709996409 0.212345679 0.345454545 0.555555556 275 40 6 359 2R:16791435-16791628 6 99 1499 FBgn0034158 1968.163333 68.45666667 105.0966667 0.050300703 1.446170327 0.941989914 2 1 1.5 0.01 dme-miR-14-3p 8mer-A1 AAGACTGA 2R 16791590 16791597 + 2R_16791590_16791597_+ 0.643565469 0.643565469 0.643565469 0 CG5522 FBtr0087030|FBtr0087029|FBtr0087031|FBtr0087028|FBtr0087026 16791350|16791350|16791350|16791350|16791350 16792472|16792472|16792472|16792472|16792472 2R + 16791477 16791638 3'utr CG5522 FlyBase G16511.1 ACATCGCTCACTCACTCCCTGAAACGAGGCAACCACAGAACATTCCCGCAACCACAACGAACGAACAAATTGCAGCTTGCATCAGATGAATCGATTTCAAAATGGTATTTCAAAAGACTGACACCGAATGAGAACACGAAGATATAGTAAAGGAGGAGCAGT 357 16791584 0.935187844 20 326 1563 0.920187793 1.639043558 0.241784038 0.145658263 0.284037559 357 26 8 392 2R:16791477-16791638 8 CG5522 FBtr0087026|FBtr0087031|FBtr0087028|FBtr0087030|FBtr0087029 16791350|16791350|16791350|16791350|16791350 16792472|16792472|16792472|16792472|16792472 AAGACTGA 8mer-A1 dme-miR-14-3p 2R + 16791435 16791628 3'utr CG5522 FlyBase G12555.2 CCTTGAAACGTGCACAGCCAAAAAAAAAAACACCCACCCACCACATCGCTCACTCACTCCCTGAAACGAGGCAACCACAGAACATTCCCGCAACCACAACGAACGAACAAATTGCAGCTTGCATCAGATGAATCGATTTCAAAATGGTATTTCAAAAGACTGACACCGAATGAGAACACGAAGATATAGTAAAG 275 16791584 0.964070358 18 243 1174 0.886419753 1.709996409 0.212345679 0.345454545 0.555555556 275 40 6 359 2R:16791435-16791628 8 184.5 1500 FBgn0034158 1968.163333 68.45666667 105.0966667 0.09374222 2.695135609 1.755526658 6 6 6 0.01 dme-miR-252-5p 6mer3-8 GTACTT 2R 16791962 16791967 + 2R_16791962_16791967_+ 1 0.980671311 0.990335655 0.013667455 CG5522 FBtr0087030|FBtr0087029|FBtr0087031|FBtr0087028|FBtr0087026 16791350|16791350|16791350|16791350|16791350 16792472|16792472|16792472|16792472|16792472 2R + 16791939 16791982 3'utr CG5522 FlyBase G16512.1 TTTGTTAATGTGCTGTCTTTGCTGTACTTTGTATTTGTAAAATG 10 16791961 0.626880592 8 10 128 1 1.113943352 0.384615385 0.3 0.461538462 10 0 0 13 2R:16791939-16791982 6 CG5522 FBtr0087026|FBtr0087031|FBtr0087028|FBtr0087030|FBtr0087029 16791350|16791350|16791350|16791350|16791350 16792472|16792472|16792472|16792472|16792472 GTACTT 6mer3-8 dme-miR-252-5p 2R + 16791941 16791985 3'utr CG5522 FlyBase G12556.1 TGTTAATGTGCTGTCTTTGCTGTACTTTGTATTTGTAAAATGTTA 11 16791968 0.87526045 8 11 135 1 1.255272505 0.333333333 0.272727273 0.555555556 11 0 0 18 2R:16791941-16791985 6 9.5 1501 FBgn0034158 1968.163333 68.45666667 105.0966667 0.004826835 0.13877392 0.090392972 1 -6 -2.5 0.01 dme-miR-970-3p 6mer3-8 TCTTAT 2R 16860106 16860111 + 2R_16860106_16860111_+ 1 1 1 0 Dek FBtr0100438|FBtr0100436|FBtr0100437|FBtr0332946 16859863|16859863|16859863|16859863 16860358|16860358|16860270|16861738 2R + 16860006 16860108 3'utr Dek FlyBase G16546.1 CCAAGTAGTTGTCTCCTATAAGTATATGATTTGTACTCCTATCCTAAAAGCTATCTGCAGTTCACCTTAATCCTAACGTCAGCGGCAGTCGACTATCCATTCT 26 16860084 0.789470712 15 24 173 0.945945946 1.243038049 0.189189189 0.230769231 0.459459459 26 1 1 35 2R:16860006-16860108 3 Dek FBtr0100437|FBtr0332946|FBtr0100438|FBtr0100436 16859863|16859863|16859863|16859863 16860270|16861738|16860358|16860358 TCTTAT 6mer3-8 dme-miR-970-3p 2R + 16859978 16860175 3'utr Dek FlyBase G12583.1 AGTTGGGCATGGTTCGCGAAATGTAACTCCAAGTAGTTGTCTCCTATAAGTATATGATTTGTACTCCTATCCTAAAAGCTATCTGCAGTTCACCTTAATCCTAACGTCAGCGGCAGTCGACTATCCATTCTTATATATATTCATCTGTATATATAACTTTTTATTTGTCCAACCGTGCGCACGCATGCACATCATTTT 31 16860103 0.978654424 22 29 243 0.9375 1.352182518 0.145833333 0.483870968 0.666666667 31 2 1 45 2R:16859978-16860175 6 3.5 1502 FBgn0026533 3518.623333 168.86 259.8033333 0.000994707 0.02072723 0.013471729 22 3 12.5 0.01 dme-miR-184-3p 7mer-m8 TCCGTCC 2R 16862678 16862684 - 2R_16862678_16862684_- 0.661615243 0.661615243 0.661615243 0 Psi FBtr0087073 16861319 16864685 2R - 16862662 16862711 3'utr Psi FlyBase G24125.1 TTCGGGACTACCATCCAAATCCTGAACTCCGTCCTGCGGCCGGCCGGCAA 7 16862677 0.98113638 2 5 21 0.857142857 0.77815125 0.142857143 0 0 7 1 0 6 2R:16862662-16862711 7 Psi FBtr0087073 16861319 16864685 TCCGTCC 7mer-m8 dme-miR-184-3p 2R - 16862663 16862704 3'utr Psi FlyBase G18259.1 CTACCATCCAAATCCTGAACTCCGTCCTGCGGCCGGCCGGCA 5 16862677 0.971257413 3 5 15 1 0.903089987 0 0.2 0.5 5 0 0 8 2R:16862663-16862704 7 4 1503 FBgn0014870 726.0433333 22.66333333 34.83333333 0.005509313 0.176496544 0.114832536 -7 -7 -7 0.01 dme-miR-932-5p 6mer3-8 GGAATT 2R 16948595 16948600 - 2R_16948595_16948600_- 1 1 1 0 mute FBtr0112692|FBtr0112691 16948294|16948294 16948715|16948715 2R - 16948566 16948624 3'utr mute FlyBase G24137.1 ACCTACAAACCAAACTTTTTGAAGGGAATTCTTTGTTGTACTGATTACCTATTTAAGCA 43 16948586 0.995458461 8 34 528 0.755102041 1.267171728 0 0.139534884 0.244897959 43 11 1 37 2R:16948566-16948624 6 mute FBtr0112692|FBtr0112691 16948294|16948294 16948715|16948715 GGAATT 6mer3-8 dme-miR-932-5p 2R - 16948547 16948613 3'utr mute FlyBase G18268.1 AAACTTTTTGAAGGGAATTCTTTGTTGTACTGATTACCTATTTAAGCATACAAAAATTCCCTTCAGA 34 16948586 0.994788662 9 29 397 0.903225806 1.748188027 0.177419355 0.529411765 0.741935484 34 6 0 56 2R:16948547-16948613 6 34.5 1504 FBgn0085444 1225.333333 34.26666667 52.61333333 0.028155604 1.006809339 0.655727319 -14 -14 -14 0.01 dme-miR-304-5p 7mer-m8 TGAGATT 2R 16952530 16952536 + 2R_16952530_16952536_+ 0.620203442 0.620203442 0.620203442 0 CG34191 FBtr0112384|FBtr0340071 16952500|16952500 16952581|16952581 2R + 16952513 16952570 3'utr CG34191 FlyBase G16563.1 CCATCTTATTTACCCTTTGAGATTTTCCCCCTTTTTGATGCTTATTAAATGTTAAACA 56 16952529 0.805840238 10 54 619 0.971830986 1.838849091 0 0.232142857 0.394366197 56 2 0 69 2R:16952513-16952570 7 CG34191 FBtr0340071|FBtr0112384 16952500|16952500 16952581|16952581 TGAGATT 7mer-m8 dme-miR-304-5p 2R + 16952511 16952567 3'utr CG34191 FlyBase G12597.1 TCCCATCTTATTTACCCTTTGAGATTTTCCCCCTTTTTGATGCTTATTAAATGTTAA 24 16952529 0.765002373 7 24 248 1 1.544068044 0.085714286 0.291666667 0.514285714 24 0 0 35 2R:16952511-16952567 7 28.5 1505 FBgn0085220 88.66666667 25.16333333 38.02 0.321428571 1.132600344 0.749605471 1 1 1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 17008240 17008245 - 2R_17008240_17008245_- 1 1 1 0 Ehbp1 FBtr0114628|FBtr0114628|FBtr0114628|FBtr0340073|FBtr0340073|FBtr0340073|FBtr0114627|FBtr0114627|FBtr0114627|FBtr0087019|FBtr0087019|FBtr0087019 17007904|17007904|17007904|17007672|17007672|17007672|17007904|17007904|17007904|17007904|17007904|17007904 17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454 2R - 17008151 17008270 3'utr Ehbp1 FlyBase G24181.1 TGGTTATTAAAAAAAAAAAGGTATACTGTGAAACAAAACAAATTGCTTTTGTATTTAAGCAAAACAATTCAAGAAATAAGAACAAAACGTCCGTTAGTGAACTAAGTAAAAAGACAGGCA 413 17008247 0.787176222 15 393 1581 0.958515284 2.040404529 0.034934498 0.099273608 0.187772926 413 16 3 439 2R:17008151-17008270 6 Ehbp1 FBtr0087019|FBtr0087019|FBtr0087019|FBtr0114627|FBtr0114627|FBtr0114627|FBtr0340073|FBtr0340073|FBtr0340073|FBtr0114628|FBtr0114628|FBtr0114628 17007904|17007904|17007904|17007904|17007904|17007904|17007672|17007672|17007672|17007904|17007904|17007904 17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 17008207 17008284 3'utr Ehbp1 FlyBase G18305.1 TGGACCACTTGGTATGGTTATTAAAAAAAAAAAGGTATACTGTGAAACAAAACAAATTGCTTTTGTATTTAAGCAAAA 160 17008247 0.922222315 5 156 541 0.973568282 1.645422269 0 0.3125 0.515418502 160 2 4 221 2R:17008207-17008284 6 199 1506 FBgn0034180 1913.18 55.65333333 85.13666667 0.104015304 3.575706756 2.337418269 2 2 2 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2R 17016467 17016472 - 2R_17016467_17016472_- 1 1 1 0 CG8963 FBtr0087017|FBtr0300573|FBtr0340126|FBtr0087016 17016224|17016344|17016344|17016344 17016965|17016965|17016965|17016965 2R - 17016436 17016487 3'utr CG8963 FlyBase G24204.1 ACGCAGCTGCACTCAAAGACTCGTACTCATATGCGCACCCACACACTTGCAT 24 17016464 0.958040527 5 21 103 0.892857143 1.096910013 0.214285714 0.125 0.25 24 2 1 25 2R:17016436-17016487 6 CG8963 FBtr0340126|FBtr0087016|FBtr0087017|FBtr0300573 17016344|17016344|17016224|17016344 17016965|17016965|17016965|17016965 AAGACT 6mer3-8 dme-miR-14-3p 2R - 17016430 17016488 3'utr CG8963 FlyBase G18325.1 CACGCAGCTGCACTCAAAGACTCGTACTCATATGCGCACCCACACACTTGCATGGCACA 25 17016464 0.931795035 4 25 94 1 1.612783857 0.146341463 0.44 0.658536585 25 0 0 41 2R:17016430-17016488 6 22.5 1507 FBgn0034181 880.38 38.95666667 59.94333333 0.025557146 0.577564816 0.375354501 -8 -8 -8 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 17016685 17016691 - 2R_17016685_17016691_- 0.801970437 0.801970437 0.801970437 0 CG8963 FBtr0087017|FBtr0087017|FBtr0087017|FBtr0300573|FBtr0300573|FBtr0300573|FBtr0340126|FBtr0340126|FBtr0340126|FBtr0087016|FBtr0087016|FBtr0087016 17016224|17016224|17016224|17016344|17016344|17016344|17016344|17016344|17016344|17016344|17016344|17016344 17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965 2R - 17016641 17016731 3'utr CG8963 FlyBase G24205.1 AATATGACATGTGTTAATGACTTTGTTCGAACGCTTTTTGTGTGATACGCCCGTTTTGTATCTCTGATAACTAACTCTCTGCCATGATAGC 29 17016693 0.987794464 14 29 257 1 1.602059991 0.3 0.24137931 0.45 29 0 0 40 2R:17016641-17016731 7 CG8963 FBtr0340126|FBtr0340126|FBtr0340126|FBtr0087016|FBtr0087016|FBtr0087016|FBtr0087017|FBtr0087017|FBtr0087017|FBtr0300573|FBtr0300573|FBtr0300573 17016344|17016344|17016344|17016344|17016344|17016344|17016224|17016224|17016224|17016344|17016344|17016344 17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 17016663 17016715 3'utr CG8963 FlyBase G18326.1 ATGACTTTGTTCGAACGCTTTTTGTGTGATACGCCCGTTTTGTATCTCTGATA 14 17016695 0.751333013 7 13 136 0.863636364 1.278753601 0.181818182 0.428571429 0.636363636 14 3 0 19 2R:17016663-17016715 7 15.5 1508 FBgn0034181 880.38 38.95666667 59.94333333 0.017606034 0.397877984 0.258577545 2 4 3 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 17016757 17016763 - 2R_17016757_17016763_- 0.801970437 0.801969576 0.801970007 5.66E-07 CG8963 FBtr0087017|FBtr0087017|FBtr0087017|FBtr0300573|FBtr0300573|FBtr0300573|FBtr0340126|FBtr0340126|FBtr0340126|FBtr0087016|FBtr0087016|FBtr0087016 17016224|17016224|17016224|17016344|17016344|17016344|17016344|17016344|17016344|17016344|17016344|17016344 17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965 2R - 17016738 17016896 3'utr CG8963 FlyBase G24206.1 GGTATAGGAGGGATGGTGGAGAGCGTAGGAGTGGAGCATTTCCAACAAATTCTCGGTTGTAGGATCGATGATTGCAGTTGCTTGGTTCAGAACCAATTGTGATTATCTTTTAAATTATTGATAGCAAATTGTTTGTGATATCTTCGTGTTTCATGCACC 49 17016765 0.988369235 18 46 421 0.949152542 1.748188027 0.288135593 0.183673469 0.322033898 49 3 0 56 2R:17016738-17016896 7 CG8963 FBtr0340126|FBtr0340126|FBtr0340126|FBtr0087016|FBtr0087016|FBtr0087016|FBtr0087017|FBtr0087017|FBtr0087017|FBtr0300573|FBtr0300573|FBtr0300573 17016344|17016344|17016344|17016344|17016344|17016344|17016224|17016224|17016224|17016344|17016344|17016344 17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 17016736 17016780 3'utr CG8963 FlyBase G18327.1 ATTGATAGCAAATTGTTTGTGATATCTTCGTGTTTCATGCACCTA 21 17016765 0.989504091 7 21 207 1 1.531478917 0.264705882 0.476190476 0.676470588 21 0 0 34 2R:17016736-17016780 7 24 1509 FBgn0034181 880.38 38.95666667 59.94333333 0.027260955 0.616069137 0.400378135 2 2 2 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 2R 17016945 17016950 - 2R_17016945_17016950_- 1 1 1 0 CG8963 FBtr0087017|FBtr0300573|FBtr0340126|FBtr0087016 17016224|17016344|17016344|17016344 17016965|17016965|17016965|17016965 2R - 17016906 17017155 stop_codon CG8963 FlyBase G24207.1 GCCCGTCTTCTACGGACCTGATGGCCGCGAATTGACTGCCGAGGAGACCGATTTTCTGGCCGGCGGGGATAATGATGGTGATGATGACTTTGATGGGGATGGTGCCGACCTAGAAATCGACGCGGAAATGGACGAGGAAACCGAGCGGGCATACAAGGAGTTCTGTAAGCAGGGCAAACAGAAGACCTAGACGACTGTGGAGAACTGTGTTGCATTGGACGGATTCATGAGGGCGTGGTCGTTGGCAGGA 40 17016958 0.999958388 22 38 177 0.959183673 1.672097858 0.265306122 0.175 0.326530612 40 2 0 47 2R:17016906-17017155 6 CG8963 FBtr0340126|FBtr0087016|FBtr0087017|FBtr0300573 17016344|17016344|17016224|17016344 17016965|17016965|17016965|17016965 TGTGTT 6mer3-8 dme-miR-317-3p 2R - 17016931 17016986 stop_codon CG8963 FlyBase G18329.1 CAGGGCAAACAGAAGACCTAGACGACTGTGGAGAACTGTGTTGCATTGGACGGATT 13 17016958 0.863348425 3 13 37 1 1.278753601 0.210526316 0.461538462 0.631578947 13 0 0 19 2R:17016931-17016986 6 5.5 1510 FBgn0034181 880.38 38.95666667 59.94333333 0.006247302 0.14118251 0.091753323 8 8 8 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 17024875 17024880 + 2R_17024875_17024880_+ 1 1 1 0 Dark FBtr0086967 17023336 17026703 2R + 17024852 17024895 3'utr Dark FlyBase G16606.1 CCAGAGAGCGGACGCAACTTCTGGCTGTGGACTCCAAGGAGCGC 10 17024873 0.959727336 2 10 49 1 1 0.2 0 0 10 0 0 10 2R:17024852-17024895 6 Dark FBtr0086967 17023336 17026703 GCTGTG 6mer2-7 dme-miR-1008-3p 2R + 17024851 17024895 3'utr Dark FlyBase G12629.1 ACCAGAGAGCGGACGCAACTTCTGGCTGTGGACTCCAAGGAGCGC 5 17024873 0.94947794 2 5 22 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 2R:17024851-17024895 6 7.5 1511 FBgn0263864 792.71 19.97666667 30.85666667 0.009461215 0.375438011 0.243059306 2 2 2 0.01 dme-miR-263a-5p 7mer-A1 TGCCATA 2R 17024982 17024988 + 2R_17024982_17024988_+ 0.782911824 0.782911824 0.782911824 0 Dark FBtr0086967 17023336 17026703 2R + 17024941 17024984 3'utr Dark FlyBase G16607.1 ACAATCACACCCACTCATGCTGCCAGTAACTGTAAGATAAATGC 9 17024958 0.669086179 3 7 56 0.8 0.903089987 0.3 0.111111111 0.2 9 2 0 8 2R:17024941-17024984 3 Dark FBtr0086967 17023336 17026703 TGCCATA 7mer-A1 dme-miR-263a-5p 2R + 17024922 17024984 3'utr Dark FlyBase G12630.1 TAGAATTTCCGAATGGTCCACAATCACACCCACTCATGCTGCCAGTAACTGTAAGATAAATGC 11 17024957 0.966768065 5 10 54 0.764705882 1.113943352 0.235294118 0.272727273 0.529411765 11 4 0 13 2R:17024922-17024984 3 4.5 1512 FBgn0263864 792.71 19.97666667 30.85666667 0.005676729 0.225262807 0.145835584 24 25 24.5 0.01 dme-miR-283-5p 7mer-m8 TGATATT 2R 17025158 17025164 + 2R_17025158_17025164_+ 0.620203677 0.620203677 0.620203677 0 Dark FBtr0086967 17023336 17026703 2R + 17025100 17025178 3'utr Dark FlyBase G16608.1 CTCAAACAGGTCAGTCCCAACATTCTGGTGGCGTCGGCACACAGTGCCCAGAAGACTGTGATATTCCAGCTGGAAAAGA 23 17025162 0.96525622 7 22 117 0.964285714 1.130333768 0.142857143 0.173913043 0.321428571 23 0 1 27 2R:17025100-17025178 7 Dark FBtr0086967 17023336 17026703 TGATATT 7mer-m8 dme-miR-283-5p 2R + 17025111 17025177 3'utr Dark FlyBase G12631.1 CAGTCCCAACATTCTGGTGGCGTCGGCACACAGTGCCCAGAAGACTGTGATATTCCAGCTGGAAAAG 16 17025162 0.952402022 6 16 73 1 1.431363764 0.222222222 0.375 0.62962963 16 0 0 27 2R:17025111-17025177 7 17 1513 FBgn0263864 792.71 19.97666667 30.85666667 0.021445421 0.850992825 0.550934428 -4 -4 -4 0.01 dme-bantam-3p 6mer3-8 TGATCT 2R 17025776 17025781 + 2R_17025776_17025781_+ 1 1 1 0 Dark FBtr0086967 17023336 17026703 2R + 17025765 17025800 3'utr Dark FlyBase G16609.1 AAAAGTTCAACTGATCTACAGCATTGAAGAGGTCCA 10 17025776 0.913875658 2 10 48 1 1.230448921 0.176470588 0.4 0.647058824 10 0 0 17 2R:17025765-17025800 6 Dark FBtr0086967 17023336 17026703 TGATCT 6mer3-8 dme-bantam-3p 2R + 17025763 17025791 3'utr Dark FlyBase G12632.1 AGAAAAGTTCAACTGATCTACAGCATTGA 6 17025776 0.766501969 2 6 25 1 0.903089987 0.25 0.333333333 0.5 6 0 0 8 2R:17025763-17025791 6 7.5 1514 FBgn0263864 792.71 19.97666667 30.85666667 0.009461215 0.375438011 0.243059306 0 0 0 0.01 dme-miR-283-5p 6mer3-8 TGATAT 2R 17026612 17026617 + 2R_17026612_17026617_+ 1 1 1 0 Dark FBtr0086968|FBtr0086967 17026427|17023336 17026703|17026703 2R + 17026598 17026634 3'utr Dark FlyBase G16611.1 CAGCTAACCAAGTATGATATCTCAGAGGGCGGTGGGT 11 17026612 0.749278143 2 10 57 0.923076923 1.079181246 0.692307692 0.181818182 0.307692308 11 1 0 12 2R:17026598-17026634 6 Dark FBtr0086968|FBtr0086967 17026427|17023336 17026703|17026703 TGATAT 6mer3-8 dme-miR-283-5p 2R + 17026595 17026637 3'utr Dark FlyBase G12633.1 ATGCAGCTAACCAAGTATGATATCTCAGAGGGCGGTGGGTGCG 8 17026612 0.762766389 3 8 45 1 1.113943352 0.769230769 0.5 0.692307692 8 0 0 13 2R:17026595-17026637 6 9.5 1515 FBgn0263864 792.71 19.97666667 30.85666667 0.011984206 0.475554814 0.307875122 0 0 0 0.01 dme-miR-968-5p 6mer3-8 ACTACT 2R 17044445 17044450 + 2R_17044445_17044450_+ 1 1 1 0 RhoGEF2 FBtr0086969|FBtr0086970|FBtr0305083|FBtr0340124|FBtr0086971 17044319|17044319|17044319|17044319|17044319 17044653|17044653|17044653|17044653|17044653 2R + 17044421 17044542 3'utr RhoGEF2 FlyBase G16657.1 AGCCTTTCTTAGAGCATGCCTTTTACTACTGTTAATGTAGCTTCATTTGTTTTCTTAAAATATTATGTATTCCACAAGAGCCGATAACACTTTAAATTAAGTCTAACATTGTCCCCTCGTAA 27 17044441 0.840200575 14 27 195 1 1.462397998 0.068965517 0.074074074 0.137931034 27 0 0 29 2R:17044421-17044542 6 RhoGEF2 FBtr0086969|FBtr0086971|FBtr0340124|FBtr0305083|FBtr0086970 17044319|17044319|17044319|17044319|17044319 17044653|17044653|17044653|17044653|17044653 ACTACT 6mer3-8 dme-miR-968-5p 2R + 17044416 17044451 3'utr RhoGEF2 FlyBase G12669.1 CGAGTAGCCTTTCTTAGAGCATGCCTTTTACTACTG 11 17044442 0.690506111 4 9 93 0.875 0.84509804 0.1875 0.272727273 0.5 11 1 1 14 2R:17044416-17044451 6 8 1516 FBgn0023172 2916.61 41.36666667 63.45333333 0.00274291 0.193392425 0.126076907 4 3 3.5 0.01 dme-miR-190-5p 6mer3-8 ACATAT 2R 17044555 17044560 + 2R_17044555_17044560_+ 1 1 1 0 RhoGEF2 FBtr0086969|FBtr0086970|FBtr0305083|FBtr0340124|FBtr0086971 17044319|17044319|17044319|17044319|17044319 17044653|17044653|17044653|17044653|17044653 2R + 17044551 17044589 3'utr RhoGEF2 FlyBase G16658.1 AAATACATATATATATGCATATTATCGACTTAAAAAATA 9 17044573 0.849090036 6 7 74 0.777777778 0.84509804 0 0 0 9 2 0 7 2R:17044551-17044589 6 RhoGEF2 FBtr0086969|FBtr0086971|FBtr0340124|FBtr0305083|FBtr0086970 17044319|17044319|17044319|17044319|17044319 17044653|17044653|17044653|17044653|17044653 ACATAT 6mer3-8 dme-miR-190-5p 2R + 17044557 17044597 3'utr RhoGEF2 FlyBase G12671.1 ATATATATATGCATATTATCGACTTAAAAAATATCAGATAA 9 17044572 0.682583056 5 9 67 1 1.079181246 0 0.222222222 0.416666667 9 0 0 12 2R:17044557-17044597 3 3.5 1517 FBgn0023172 2916.61 41.36666667 63.45333333 0.001200023 0.084609186 0.055158647 -18 -17 -17.5 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2R 17053546 17053552 + 2R_17053546_17053552_+ 0.521223855 0.521223855 0.521223855 0 CG9646 FBtr0086974|FBtr0340125 17053524|17053524 17053855|17053855 2R + 17053547 17053673 3'utr CG9646 FlyBase G16672.1 GTGATTTATATGCTTTATAGTTCTCACATGTATTCCCTATTTATCGATCGAATGTGTGACCAGTCTGTGTGATCAGTCCCAGTTTGATTTATCAGTATATATGCTATGTTCTCGACCAATGTTGAGT 23 17053555 0.990850039 11 21 213 0.931034483 1.130333768 0.068965517 0.217391304 0.379310345 23 1 1 27 2R:17053547-17053673 5 CG9646 FBtr0086974|FBtr0340125 17053524|17053524 17053855|17053855 TGTGATT 7mer-m1 dme-miR-308-3p 2R + 17053541 17053576 3'utr CG9646 FlyBase G12680.1 GCAATTGTGATTTATATGCTTTATAGTTCTCACATG 9 17053556 0.673756293 7 9 96 1 1.204119983 0.0625 0.555555556 0.75 9 0 0 16 2R:17053541-17053576 7 8.5 1518 FBgn0034184 559.1833333 20.39333333 31.34666667 0.015200739 0.416802877 0.271161208 -9 -10 -9.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2R 17053614 17053619 + 2R_17053614_17053619_+ 1 1 1 0 CG9646 FBtr0086974|FBtr0086974|FBtr0086974|FBtr0340125|FBtr0340125|FBtr0340125 17053524|17053524|17053524|17053524|17053524|17053524 17053855|17053855|17053855|17053855|17053855|17053855 2R + 17053547 17053673 3'utr CG9646 FlyBase G16672.1 GTGATTTATATGCTTTATAGTTCTCACATGTATTCCCTATTTATCGATCGAATGTGTGACCAGTCTGTGTGATCAGTCCCAGTTTGATTTATCAGTATATATGCTATGTTCTCGACCAATGTTGAGT 23 17053612 0.990850039 11 21 213 0.931034483 1.130333768 0.068965517 0.217391304 0.379310345 23 1 1 27 2R:17053547-17053673 6 CG9646 FBtr0086974|FBtr0086974|FBtr0086974|FBtr0340125|FBtr0340125|FBtr0340125 17053524|17053524|17053524|17053524|17053524|17053524 17053855|17053855|17053855|17053855|17053855|17053855 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 17053588 17053629 3'utr CG9646 FlyBase G12681.1 TATCGATCGAATGTGTGACCAGTCTGTGTGATCAGTCCCAGT 6 17053603 0.984029371 3 4 28 1 1 0 0.5 0.7 6 0 0 10 2R:17053588-17053629 6 4.5 1519 FBgn0034184 559.1833333 20.39333333 31.34666667 0.00804745 0.220660347 0.143555934 2 11 6.5 0.01 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 17059435 17059441 - 2R_17059435_17059441_- 0.823349189 0.823349558 0.823349373 2.83E-07 CG8950 FBtr0306810 17059329 17059943 2R - 17059421 17059445 3'utr CG8950 FlyBase G24223.1 AGAAAGCTTTAAGTGATCAAGGGGA 6 17059436 0.563147404 4 6 24 1 0.77815125 0 0 0 6 0 0 6 2R:17059421-17059445 7 CG8950 FBtr0306810 17059329 17059943 AGCTTTA 7mer-A1 dme-miR-79-3p 2R - 17059419 17059447 3'utr CG8950 FlyBase G18344.1 CTAGAAAGCTTTAAGTGATCAAGGGGAAA 6 17059436 0.776191181 4 6 27 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 2R:17059419-17059447 7 6 1520 FBgn0034186 159.6633333 6.763333333 10.41 0.037579073 0.88713652 0.576368876 -5 -5 -5 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 2R 17088570 17088576 - 2R_17088570_17088576_- 0.782911824 0.782911824 0.782911824 0 Sply FBtr0087008|FBtr0087007 17088439|17088439 17088719|17088719 2R - 17088507 17088613 3'utr Sply FlyBase G24229.1 AATTTATATTAGGATGCAATTAGTGCTGTAATCGAGGGTACAAAACGTCGTTCTACGCGAAAATCTATCTACCTATGTTCATCCCATTTGTCAACATTCGTCGCTCT 16 17088582 0.982171086 8 14 106 0.85 1.230448921 0.45 0.1875 0.35 16 3 0 17 2R:17088507-17088613 7 Sply FBtr0087008|FBtr0087007 17088439|17088439 17088719|17088719 GTACAAA 7mer-A1 dme-miR-305-5p 2R - 17088561 17088606 3'utr Sply FlyBase G18348.1 ATTAGGATGCAATTAGTGCTGTAATCGAGGGTACAAAACGTCGTTC 9 17088585 0.978822283 4 6 47 0.888888889 0.903089987 0.222222222 0.666666667 0.833333333 9 1 1 16 2R:17088561-17088606 7 8 1521 FBgn0010591 556.6466667 33.54666667 51.29666667 0.014371774 0.238473768 0.155955553 6 9 7.5 0.01 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 17092972 17092979 + 2R_17092972_17092979_+ 0.625364269 0.625364269 0.625364269 0 CG6984 FBtr0086979 17092926 17093070 2R + 17092942 17092992 3'utr CG6984 FlyBase G16685.1 ATGAAATAATGAATCAAAACTGACCAATTGTGCATTTATACTTTTAAGCTT 29 17092970 0.853743806 8 28 236 1 1.544068044 0 0.172413793 0.314285714 29 0 0 35 2R:17092942-17092992 8 CG6984 FBtr0086979 17092926 17093070 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 17092944 17093002 3'utr CG6984 FlyBase G12690.1 GAAATAATGAATCAAAACTGACCAATTGTGCATTTATACTTTTAAGCTTGAATTGTCCA 22 17092969 0.991127551 9 20 210 0.9375 1.176091259 0.09375 0.409090909 0.59375 22 1 1 30 2R:17092944-17093002 8 23 1522 FBgn0034191 139.3066667 16.87666667 25.83666667 0.165103369 1.362828363 0.890207715 2 3 2.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 17107370 17107375 + 2R_17107370_17107375_+ 1 1 1 0 CG30456 FBtr0273337|FBtr0333550|FBtr0273336 17107135|17107135|17107135 17107542|17107542|17107542 2R + 17107230 17107397 3'utr CG30456 FlyBase G16699.1 ACATCTGGAGCTGCCAGTGGCGGCCAATTGTCGGGGGCCATTGAGCCAAGTCAATATTCGAAATTGTTTCAAATTGCTGCTCATTGTTTGTGGCACAAGGAGATCGGGAGTCGAACGCCTTTCGCTTTGAATGCTAAGTAACCAAATATTGAATTATAAGTGTAACTT 64 17107378 0.806464372 18 60 475 0.947368421 1.556302501 0.276315789 0.171875 0.302631579 64 3 1 72 2R:17107230-17107397 6 CG30456 FBtr0273336|FBtr0333550|FBtr0273337 17107135|17107135|17107135 17107542|17107542|17107542 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 17107230 17107400 3'utr CG30456 FlyBase G12698.1 ACATCTGGAGCTGCCAGTGGCGGCCAATTGTCGGGGGCCATTGAGCCAAGTCAATATTCGAAATTGTTTCAAATTGCTGCTCATTGTTTGTGGCACAAGGAGATCGGGAGTCGAACGCCTTTCGCTTTGAATGCTAAGTAACCAAATATTGAATTATAAGTGTAACTTGTT 65 17107378 0.875417105 21 64 446 1 1.954242509 0.233333333 0.292307692 0.488888889 65 0 0 90 2R:17107230-17107400 6 19.5 1523 FBgn0050456 173 7.583333333 11.60333333 0.112716763 2.571428571 1.680551566 -8 -8 -8 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 2R 17139579 17139584 - 2R_17139579_17139584_- 1 1 1 0 CG43103 FBtr0304891 17139448 17139638 2R - 17139565 17139604 3'utr CG43103 FlyBase G24240.1 TATCAGAACGTGCTACAAGCTGTGTTTTTATTGATACTTA 10 17139578 0.834868946 6 10 100 1 1.204119983 0 0.4 0.625 10 0 0 16 2R:17139565-17139604 6 CG43103 FBtr0304891 17139448 17139638 TGTGTT 6mer3-8 dme-miR-317-3p 2R - 17139565 17139633 3'utr CG43103 FlyBase G18355.1 CAAGCTCTGAAGATCGATTTAAAGTTCAATATCAGAACGTGCTACAAGCTGTGTTTTTATTGATACTTA 11 17139579 0.758944397 8 11 88 1 1.079181246 0.25 0.090909091 0.166666667 11 0 0 12 2R:17139565-17139633 6 8.5 1524 FBgn0262563 14 4.063333333 6.323333333 0.607142857 2.091878589 1.344227728 -6 -5 -5.5 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 17364026 17364033 + 2R_17364026_17364033_+ 0.500120318 0.500120318 0.500120318 0 mbl FBtr0336940|FBtr0306604|FBtr0306606|FBtr0306603|FBtr0336941|FBtr0306601|FBtr0336942 17363985|17363985|17363985|17363985|17363985|17363985|17363985 17365386|17365386|17365386|17365386|17365386|17365386|17365386 2R + 17363975 17364093 stop_codon mbl FlyBase G16726.1 AAGACCTCCTAAGAACCCGGGCGATAACAATCTAAAAGTCCAAACACAACTGTACTTAATGCACCAAGCCATCGAACAGATGGAATAGTCACACCATTTTAGATTTATAGATATAAACA 304 17364025 0.959092407 10 299 1403 0.986072423 2.549003262 0.08356546 0.138157895 0.270194986 304 5 0 354 2R:17363975-17364093 8 mbl FBtr0336942|FBtr0306603|FBtr0336941|FBtr0306601|FBtr0306604|FBtr0306606|FBtr0336940 17363985|17363985|17363985|17363985|17363985|17363985|17363985 17365386|17365386|17365386|17365386|17365386|17365386|17365386 GTACTTAA 8mer-A1 dme-miR-252-5p 2R + 17364000 17364092 3'utr mbl FlyBase G12713.1 AACAATCTAAAAGTCCAAACACAACTGTACTTAATGCACCAAGCCATCGAACAGATGGAATAGTCACACCATTTTAGATTTATAGATATAAAC 195 17364025 0.892764008 6 188 905 0.967213115 2.16879202 0.101639344 0.394871795 0.613114754 195 9 1 295 2R:17364000-17364092 8 239 1525 FBgn0265487 1263.543333 28.89333333 44.05 0.189150616 8.271804338 5.425652667 1 1 1 0.01 dme-miR-999-3p 7mer-m8 AGTTAAC 2R 17364465 17364471 + 2R_17364465_17364471_+ 0.674514267 0.674435414 0.674474841 5.58E-05 mbl FBtr0336940|FBtr0306604|FBtr0306606|FBtr0306603|FBtr0336941|FBtr0306601|FBtr0336942 17363985|17363985|17363985|17363985|17363985|17363985|17363985 17365386|17365386|17365386|17365386|17365386|17365386|17365386 2R + 17364410 17364486 3'utr mbl FlyBase G16728.1 GAGAAACAGATGTTAGATGATAGTAATACTTAAGTTCCTTTTTTGAATAGCTCTTAGTTAACTCTAGTTTATAGGAA 10 17364463 0.937767874 7 9 97 0.916666667 1.041392685 0 0.2 0.333333333 10 1 0 11 2R:17364410-17364486 7 mbl FBtr0336942|FBtr0306603|FBtr0336941|FBtr0306601|FBtr0306604|FBtr0306606|FBtr0336940 17363985|17363985|17363985|17363985|17363985|17363985|17363985 17365386|17365386|17365386|17365386|17365386|17365386|17365386 AGTTAAC 7mer-m8 dme-miR-999-3p 2R + 17364397 17364496 3'utr mbl FlyBase G12716.1 CAAGCGAACGGAAGAGAAACAGATGTTAGATGATAGTAATACTTAAGTTCCTTTTTTGAATAGCTCTTAGTTAACTCTAGTTTATAGGAAACGGTCACAC 11 17364449 0.989237958 8 10 93 1 1.176091259 0 0.363636364 0.533333333 11 0 0 15 2R:17364397-17364496 7 4 1526 FBgn0265487 1263.543333 28.89333333 44.05 0.003165701 0.13844024 0.090805902 2 16 9 0.01 dme-miR-184-3p 6mer2-7 CCGTCC 2R 17364695 17364700 + 2R_17364695_17364700_+ 1 1 1 0 mbl FBtr0336940|FBtr0306604|FBtr0306606|FBtr0306603|FBtr0336941|FBtr0306601|FBtr0336942 17363985|17363985|17363985|17363985|17363985|17363985|17363985 17365386|17365386|17365386|17365386|17365386|17365386|17365386 2R + 17364617 17364722 3'utr mbl FlyBase G16730.1 AAACCTCTAATGCTGCTGCCGATGCTGGGTACAGTTGTGTATGCTTGTTGCTAGCTGCGGGTGCTTAATGCCATATTGCCGTCCCTGTCTCCCAAATGCGGTAGTT 165 17364693 0.768736806 15 159 1188 0.969543147 1.803912113 0.147208122 0.145454545 0.284263959 165 4 2 191 2R:17364617-17364722 6 mbl FBtr0336942|FBtr0306603|FBtr0336941|FBtr0306601|FBtr0306604|FBtr0306606|FBtr0336940 17363985|17363985|17363985|17363985|17363985|17363985|17363985 17365386|17365386|17365386|17365386|17365386|17365386|17365386 CCGTCC 6mer2-7 dme-miR-184-3p 2R + 17364679 17364721 3'utr mbl FlyBase G12718.1 GCTTAATGCCATATTGCCGTCCCTGTCTCCCAAATGCGGTAGT 62 17364693 0.745579698 5 58 426 0.947916667 1.959041392 0.135416667 0.370967742 0.59375 62 5 0 91 2R:17364679-17364721 6 104 1527 FBgn0265487 1263.543333 28.89333333 44.05 0.082308218 3.599446239 2.360953462 2 2 2 0.01 dme-miR-986-5p 6mer3-8 ATTCGA 2R 17364975 17364980 + 2R_17364975_17364980_+ 1 1 1 0 mbl FBtr0336940|FBtr0306604|FBtr0306606|FBtr0306603|FBtr0336941|FBtr0306601|FBtr0336942 17363985|17363985|17363985|17363985|17363985|17363985|17363985 17365386|17365386|17365386|17365386|17365386|17365386|17365386 2R + 17364949 17365015 3'utr mbl FlyBase G16732.1 TGTACGTGCTGTATGCTGCTACCCATATTCGATACAATATATACACCCACACTATGTACTCTAACAC 12 17364962 0.958777511 6 12 65 1 1.079181246 0 0 0 12 0 0 12 2R:17364949-17365015 6 mbl FBtr0336942|FBtr0306603|FBtr0336941|FBtr0306601|FBtr0306604|FBtr0306606|FBtr0336940 17363985|17363985|17363985|17363985|17363985|17363985|17363985 17365386|17365386|17365386|17365386|17365386|17365386|17365386 ATTCGA 6mer3-8 dme-miR-986-5p 2R + 17364952 17365012 3'utr mbl FlyBase G12720.1 ACGTGCTGTATGCTGCTACCCATATTCGATACAATATATACACCCACACTATGTACTCTAA 6 17364962 0.936128749 5 6 31 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2R:17364952-17365012 6 3 1528 FBgn0265487 1263.543333 28.89333333 44.05 0.002374276 0.10383018 0.068104427 13 13 13 0.01 dme-miR-1012-3p 6mer2-7 TGACTA 2R 17405370 17405375 - 2R_17405370_17405375_- 1 0.999978832 0.999989416 1.50E-05 CG6568 FBtr0086964|FBtr0340144 17405302|17405302 17405480|17405480 2R - 17405351 17405390 3'utr CG6568 FlyBase G24252.1 ATGCAATGTAGAAACTGACTATTAACAAGTACGATTAAAA 13 17405369 0.965291875 4 12 66 0.9375 1.176091259 0.125 0.230769231 0.375 13 1 0 15 2R:17405351-17405390 6 CG6568 FBtr0086964|FBtr0340144 17405302|17405302 17405480|17405480 TGACTA 6mer2-7 dme-miR-1012-3p 2R - 17405365 17405400 3'utr CG6568 FlyBase G18361.1 TGTATTGTTAATGCAATGTAGAAACTGACTATTAAC 8 17405369 0.956460221 5 7 51 0.928571429 1.113943352 0 0.25 0.571428571 8 1 0 13 2R:17405365-17405400 6 10 1529 FBgn0034210 337.2533333 24.08333333 37.00333333 0.029651301 0.415224913 0.270245924 -6 -6 -6 0.01 dme-miR-7-5p 7mer-m8 GTCTTCC 2R 17414419 17414425 - 2R_17414419_17414425_- 0.705950313 0.705950313 0.705950313 0 cnk FBtr0086962|FBtr0340214 17413968|17413968 17414572|17414572 2R - 17414401 17414476 3'utr cnk FlyBase G24265.1 ATATAGCGATATTCTCGTACGATTTAGGTATACAACTTGTTCATTTTGATCGTCTTCCCTGTCTGTCCACCAGAAA 93 17414422 0.697757003 14 89 1018 0.963302752 1.720159303 0.220183486 0.150537634 0.275229358 93 3 1 105 2R:17414401-17414476 7 cnk FBtr0086962|FBtr0340214 17413968|17413968 17414572|17414572 GTCTTCC 7mer-m8 dme-miR-7-5p 2R - 17414402 17414486 3'utr cnk FlyBase G18369.1 TATATATTATATATAGCGATATTCTCGTACGATTTAGGTATACAACTTGTTCATTTTGATCGTCTTCCCTGTCTGTCCACCAGAA 65 17414422 0.991835438 14 65 715 1 1.986771734 0.206185567 0.369230769 0.577319588 65 0 0 97 2R:17414402-17414486 7 73.5 1530 FBgn0021818 1145.12 24.51333333 37.43 0.064185413 2.998368235 1.963665509 -3 -3 -3 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA 2R 17414562 17414567 - 2R_17414562_17414567_- 1 1 1 0 cnk FBtr0086962|FBtr0340214 17413968|17413968 17414572|17414572 2R - 17414523 17414624 stop_codon cnk FlyBase G24266.1 CAACACCAACACCAACAGCAGTCCCAGTGGCGGCGAACACCATCAGACCTAGATGTGTGATGAAAACTATTGTGAATGCTCGCGGGGATTAGCCCCCGTTTA 138 17414555 0.999691708 9 128 899 0.931677019 1.273001272 0.360248447 0.123188406 0.248447205 138 4 7 150 2R:17414523-17414624 6 cnk FBtr0086962|FBtr0340214 17413968|17413968 17414572|17414572 TGATGA 6mer3-8 dme-miR-2a-2-5p 2R - 17414524 17414588 stop_codon cnk FlyBase G18370.1 ACACCATCAGACCTAGATGTGTGATGAAAACTATTGTGAATGCTCGCGGGGATTAGCCCCCGTTT 87 17414555 0.65580968 11 80 511 0.93220339 1.740362689 0.474576271 0.298850575 0.483050847 87 7 1 110 2R:17414524-17414588 6 84 1531 FBgn0021818 1145.12 24.51333333 37.43 0.073354758 3.426706554 2.244189153 -12 -12 -12 0.01 dme-miR-184-5p 6mer3-8 TGATAA 2R 17448658 17448663 - 2R_17448658_17448663_- 1 1 1 0 mthl3 FBtr0340211|FBtr0340212|FBtr0086955 17448531|17448531|17448531 17449117|17449117|17449117 2R - 17448608 17448823 3'utr mthl3 FlyBase G24317.1 GTGCCATCAAAGCGAGATCAAAGCAACTACTACATGGGGATATGTACGAATCTTATAGGCATGAATACTCGGCATTTATATACCCTGGTCTATTATTATGGATGGAGGATAAAAACTCAGGAAAATACTTTTCGCATCAGCACTTATGTATGCTCACTCGTGATAATAATTTCGTAATAATTCGTACTGTTTTTACTGCCTCAACTTAATTCAAAG 61 17448657 0.971349439 24 58 411 0.961038961 1.86923172 0.233766234 0.196721311 0.363636364 61 3 0 74 2R:17448608-17448823 6 mthl3 FBtr0086955|FBtr0340212|FBtr0340211 17448531|17448531|17448531 17449117|17449117|17449117 TGATAA 6mer3-8 dme-miR-184-5p 2R - 17448646 17448790 3'utr mthl3 FlyBase G18404.1 ATGGGGATATGTACGAATCTTATAGGCATGAATACTCGGCATTTATATACCCTGGTCTATTATTATGGATGGAGGATAAAAACTCAGGAAAATACTTTTCGCATCAGCACTTATGTATGCTCACTCGTGATAATAATTTCGTAAT 28 17448693 0.949251958 19 25 189 0.948717949 1.091080469 0.102564103 0.321428571 0.512820513 28 0 2 37 2R:17448646-17448790 6 20.5 1532 FBgn0028956 336.38 20.09333333 30.48333333 0.060942981 1.020238885 0.672498633 -6 30 12 0.01 dme-miR-317-3p 6mer2-7 GTGTTC 2R 17464316 17464321 + 2R_17464316_17464321_+ 1 1 1 0 CG14478 FBtr0345418|FBtr0086921|FBtr0086922|FBtr0345417 17464232|17464232|17464232|17464232 17465795|17465580|17465580|17465580 2R + 17464246 17464400 3'utr CG14478 FlyBase G16785.1 GAGCAACCAGGATGTGGACAGGGCTTAGAGCACTTGACCGCTATGGCGGTCGTGCAGGCGGACAATGATCGTGTTCCAGAACCTGATCCGAGGAGTAGGCGCTCCTCGGCGTCTGTCAGAGGCCGGAGAGCGAAGGAAGAAAATCTTTATATACA 89 17464317 0.946717142 15 85 370 0.972477064 2.025305865 0.293577982 0.204545455 0.357798165 88 3 0 106 2R:17464246-17464400 6 CG14478 FBtr0345417|FBtr0086922|FBtr0086921|FBtr0345418 17464232|17464232|17464232|17464232 17465580|17465580|17465580|17465795 GTGTTC 6mer2-7 dme-miR-317-3p 2R + 17464288 17464341 3'utr CG14478 FlyBase G12765.2 ATGGCGGTCGTGCAGGCGGACAATGATCGTGTTCCAGAACCTGATCCGAGGAGT 73 17464317 0.672446897 4 69 305 0.935779817 2.008600172 0.321100917 0.383561644 0.587155963 73 7 0 102 2R:17464288-17464341 6 68.5 1533 FBgn0028953 686.9066667 21.63 33.22666667 0.099722427 3.166897827 2.061597111 -1 -1 -1 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT 2R 17465345 17465351 + 2R_17465345_17465351_+ 0.658999527 0.658999527 0.658999527 0 CG14478 FBtr0345418|FBtr0086921|FBtr0086922|FBtr0345417 17464232|17464232|17464232|17464232 17465795|17465580|17465580|17465580 2R + 17465323 17465372 3'utr CG14478 FlyBase G16790.1 TTCCTTGACTACCACCACCCATGGCAGCTTCCTGGGAGCTCCATTGGGGG 51 17465344 0.985752785 2 49 222 0.946428571 1.72427587 0.142857143 0.098039216 0.178571429 51 3 0 53 2R:17465323-17465372 7 CG14478 FBtr0345417|FBtr0086922|FBtr0086921|FBtr0345418 17464232|17464232|17464232|17464232 17465580|17465580|17465580|17465795 GGCAGCT 7mer-m8 dme-miR-980-3p 2R + 17465315 17465365 3'utr CG14478 FlyBase G12770.1 ACGCAAACTTCCTTGACTACCACCACCCATGGCAGCTTCCTGGGAGCTCCA 30 17465344 0.99460853 3 30 130 1 1.612783857 0.12195122 0.366666667 0.536585366 30 0 0 41 2R:17465315-17465365 7 39.5 1534 FBgn0028953 686.9066667 21.63 33.22666667 0.057504173 1.82616736 1.188804173 1 1 1 0.01 dme-miR-263a-5p 6mer3-8 GTGCCA 2R 17466000 17466005 - 2R_17466000_17466005_- 1 1 1 0 Tes FBtr0086954 17465877 17466419 2R - 17465977 17466026 3'utr Tes FlyBase G24328.1 ACAATTCCAACCGCTTTTGCAGTGCCAATAGACCAAGTAGAGTATATACA 12 17465998 0.888393134 3 11 73 0.916666667 0.740362689 0 0 0 12 0 1 11 2R:17465977-17466026 6 Tes FBtr0086954 17465877 17466419 GTGCCA 6mer3-8 dme-miR-263a-5p 2R - 17465922 17466024 3'utr Tes FlyBase G18414.1 AATTCCAACCGCTTTTGCAGTGCCAATAGACCAAGTAGAGTATATACAAATATTTTATATATAATATACACAGATCTATTTACTTATTGAAAAGTATTATGTA 16 17466010 0.956701778 9 15 137 0.95 0.977723605 0.05 0.1875 0.35 16 0 1 19 2R:17465922-17466024 6 8 1535 FBgn0034223 707.2066667 27.67666667 42.61666667 0.011312111 0.28905215 0.187719984 -7 5 -1 0.01 dme-miR-304-5p 8mer-A1 TGAGATTA 2R 17473681 17473688 + 2R_17473681_17473688_+ 0.625363359 0.625363359 0.625363359 0 qkr54B FBtr0306248|FBtr0331464 17472244|17473146 17474648|17475129 2R + 17473656 17473703 3'utr qkr54B FlyBase G16798.1 TGACGGTCGGTAGAGACAGAATCTATGAGATTAATTAACTTAATAGAA 14 17473681 0.981784032 2 14 95 1 1.278753601 0 0.214285714 0.421052632 14 0 0 19 2R:17473656-17473703 8 qkr54B FBtr0306248|FBtr0331464 17472244|17473146 17474648|17475129 TGAGATTA 8mer-A1 dme-miR-304-5p 2R + 17473656 17473704 3'utr qkr54B FlyBase G12775.1 TGACGGTCGGTAGAGACAGAATCTATGAGATTAATTAACTTAATAGAAT 10 17473681 0.783293786 3 8 68 0.714285714 0.698970004 0 0.2 0.428571429 10 3 1 10 2R:17473656-17473704 8 10 1536 FBgn0022987 869.43 42.83333333 65.55 0.011501789 0.233463035 0.152555301 0 0 0 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 17517269 17517276 + 2R_17517269_17517276_+ 0.500120318 0.500120318 0.500120318 0 CG4853 FBtr0340216|FBtr0086938|FBtr0086939 17517103|17517103|17517103 17517445|17517445|17517445 2R + 17517246 17517282 3'utr CG4853 FlyBase G16812.1 ACTTCCACTGTGTTTGTTAATTTGTACTTAAGCTTAG 17 17517268 0.755638286 4 17 189 1 1.278753601 0.157894737 0.117647059 0.210526316 17 0 0 19 2R:17517246-17517282 8 CG4853 FBtr0086939|FBtr0340216|FBtr0086938 17517103|17517103|17517103 17517445|17517445|17517445 GTACTTAA 8mer-A1 dme-miR-252-5p 2R + 17517231 17517289 3'utr CG4853 FlyBase G12784.1 AATAATAACTCTTACACTTCCACTGTGTTTGTTAATTTGTACTTAAGCTTAGACGACGG 18 17517268 0.855340985 6 17 161 0.962962963 1.414973348 0.259259259 0.388888889 0.592592593 18 1 0 26 2R:17517231-17517289 8 16 1537 FBgn0034230 943.6633333 39.8 60.59666667 0.016955199 0.40201005 0.264040926 1 1 1 0.01 dme-miR-965-3p 8mer-A1 TACGCTTA 2R 17555736 17555743 + 2R_17555736_17555743_+ 0.625364919 0.625364919 0.625364919 0 MESR4 FBtr0086946|FBtr0113090|FBtr0340220|FBtr0340219 17555653|17555653|17555653|17555653 17556289|17556289|17556289|17556289 2R + 17555705 17555792 3'utr MESR4 FlyBase G16855.2 CTATAACTACAAACCCCACTACAGAATGGATTACGCTTATTAATTGATAAAAACATATAGTCGCTCATCCCTGGCGATCGTCTAAGGA 1513 17555735 0.834839678 14 1488 12703 0.983954155 2.535800291 0.026361032 0.134170522 0.249283668 1513 24 4 1717 2R:17555705-17555792 8 MESR4 FBtr0340219|FBtr0340220|FBtr0113090|FBtr0086946 17555653|17555653|17555653|17555653 17556289|17556289|17556289|17556289 TACGCTTA 8mer-A1 dme-miR-965-3p 2R + 17555655 17555797 3'utr MESR4 FlyBase G12825.1 ATGAACACGGATTAACTGCATCATTGGTTCCTCCTACCACAAATAAACAACTATAACTACAAACCCCACTACAGAATGGATTACGCTTATTAATTGATAAAAACATATAGTCGCTCATCCCTGGCGATCGTCTAAGGATAAGA 808 17555735 0.825484833 20 790 6518 0.981974922 2.49589108 0.028996865 0.403465347 0.622257053 808 20 3 1253 2R:17555655-17555797 8 1144.5 1538 FBgn0034240 1589.276667 23.95 36.81 0.720138931 47.78705637 31.09209454 1 1 1 0.01 dme-miR-317-5p 8mer-A1 GTATCCCA 2R 17555948 17555955 + 2R_17555948_17555955_+ 0.675380922 0.675380922 0.675380922 0 MESR4 FBtr0086946|FBtr0113090|FBtr0340220|FBtr0340219 17555653|17555653|17555653|17555653 17556289|17556289|17556289|17556289 2R + 17555942 17556081 3'utr MESR4 FlyBase G16857.1 AGAAGAGTATCCCATTATATATACATTTCTATATTCGCTTAAATCGTTTGTAAATATCGATGGCTGCATATTTCGTATGCACTTTGTAAAATAGCTAGATTACAAGATAGACACCATAAACACTTAGGAAATAGGTTATA 22 17555975 0.984487187 11 22 171 1 1.491361694 0.129032258 0.272727273 0.483870968 22 0 0 31 2R:17555942-17556081 8 MESR4 FBtr0340219|FBtr0340220|FBtr0113090|FBtr0086946 17555653|17555653|17555653|17555653 17556289|17556289|17556289|17556289 GTATCCCA 8mer-A1 dme-miR-317-5p 2R + 17555924 17556028 3'utr MESR4 FlyBase G12826.1 GTAATATAAATATTCGCAAGAAGAGTATCCCATTATATATACATTTCTATATTCGCTTAAATCGTTTGTAAATATCGATGGCTGCATATTTCGTATGCACTTTGT 13 17555975 0.982378776 9 13 108 1 1.230448921 0.058823529 0.307692308 0.470588235 13 0 0 17 2R:17555924-17556028 8 2.5 1539 FBgn0034240 1589.276667 23.95 36.81 0.001573043 0.104384134 0.067916327 -27 -27 -27 0.01 dme-miR-1003-3p 7mer-A1 TGTGAGA 2R 17556223 17556229 + 2R_17556223_17556229_+ 0.823349562 0.823349562 0.823349562 0 MESR4 FBtr0086946|FBtr0113090|FBtr0340220|FBtr0340219 17555653|17555653|17555653|17555653 17556289|17556289|17556289|17556289 2R + 17556206 17556244 3'utr MESR4 FlyBase G16859.1 AAATAAACATGCAACATTGTGAGACGTATACAAAAACAA 17 17556222 0.721181271 3 17 74 1 1.414973348 0.076923077 0.352941176 0.576923077 17 0 0 26 2R:17556206-17556244 7 MESR4 FBtr0340219|FBtr0340220|FBtr0113090|FBtr0086946 17555653|17555653|17555653|17555653 17556289|17556289|17556289|17556289 TGTGAGA 7mer-A1 dme-miR-1003-3p 2R + 17556174 17556232 3'utr MESR4 FlyBase G12827.1 AGCTGCAAATCGGAATGCAATGGATTATGAAAAAATAAACATGCAACATTGTGAGACGT 6 17556222 0.94455716 4 5 24 0.714285714 0.698970004 0.285714286 0.166666667 0.285714286 6 2 0 5 2R:17556174-17556232 7 10 1540 FBgn0034240 1589.276667 23.95 36.81 0.006292171 0.417536534 0.271665308 1 1 1 0.01 dme-miR-1006-3p 7mer-A1 GAATTTA 2R 17572023 17572029 + 2R_17572023_17572029_+ 0.823349562 0.823349562 0.823349562 0 POSH FBtr0086828 17572001 17572322 2R + 17571958 17572058 stop_codon POSH FlyBase G16874.1 AAAACCGGGCTGTTCCCCGCCTCCTTTGTTGAACCGGATTGTTAGGAAAGTTATGGTTCAAACTAGAATTTATTAAGCGAAATTCCAAATTACTTGTCTAA 22 17572011 0.834145115 9 21 150 0.962962963 1.414973348 0.037037037 0.181818182 0.333333333 22 1 0 26 2R:17571958-17572058 7 POSH FBtr0086828 17572001 17572322 GAATTTA 7mer-A1 dme-miR-1006-3p 2R + 17572001 17572082 stop_codon POSH FlyBase G12837.2 AGGAAAGTTATGGTTCAAACTAGAATTTATTAAGCGAAATTCCAAATTACTTGTCTAAAAGGATTCAATCGTCGGTCTATTC 9 17572011 0.989343069 4 7 66 0.933333333 0.84509804 0.133333333 0.555555556 0.733333333 9 0 1 14 2R:17572001-17572082 7 7 1541 FBgn0040294 488.92 18.72 28.71333333 0.014317271 0.373931624 0.24378918 12 12 12 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT 2R 17572155 17572161 + 2R_17572155_17572161_+ 0.658999527 0.658999527 0.658999527 0 POSH FBtr0086828 17572001 17572322 2R + 17572120 17572180 3'utr POSH FlyBase G16875.1 AAAAAGAAACCGTTTTGTACTCTTCCAATCGAATGGGCAGCTCGCCGTTGTACTTTTTTAT 94 17572153 0.934780543 9 90 665 0.951456311 1.991226076 0.330097087 0.085106383 0.165048544 94 5 0 98 2R:17572120-17572180 7 POSH FBtr0086828 17572001 17572322 GGCAGCT 7mer-m8 dme-miR-980-3p 2R + 17572127 17572179 3'utr POSH FlyBase G12838.1 AACCGTTTTGTACTCTTCCAATCGAATGGGCAGCTCGCCGTTGTACTTTTTTA 71 17572153 0.931401221 9 67 478 0.942307692 1.514104821 0.182692308 0.338028169 0.548076923 71 4 2 98 2R:17572127-17572179 7 76.5 1542 FBgn0040294 488.92 18.72 28.71333333 0.156467316 4.086538462 2.664267472 2 2 2 0.01 dme-miR-305-3p 6mer2-7 TGTGCC 2R 17572279 17572284 + 2R_17572279_17572284_+ 1 1 1 0 POSH FBtr0086828 17572001 17572322 2R + 17572227 17572320 3'utr POSH FlyBase G16876.1 GTTACTTAAGCCTTAGCGATTAGTTAGCTAGAGAAATAATCTAACCGATCCTTGTGCCCTCTACAAAGTTATTTGTAATATACGATACTCAGTA 32 17572279 0.71423791 11 30 209 0.948717949 1.091080469 0.128205128 0.1875 0.333333333 32 0 2 37 2R:17572227-17572320 6 POSH FBtr0086828 17572001 17572322 TGTGCC 6mer2-7 dme-miR-305-3p 2R + 17572261 17572296 3'utr POSH FlyBase G12839.1 AATAATCTAACCGATCCTTGTGCCCTCTACAAAGTT 11 17572280 0.703449157 2 11 63 1 1.230448921 0.352941176 0.454545455 0.647058824 11 0 0 17 2R:17572261-17572296 6 16 1543 FBgn0040294 488.92 18.72 28.71333333 0.03272519 0.854700855 0.557232412 0 -1 -0.5 0.01 dme-miR-305-3p 8mer-m1 ATGTGCCG 2R 17573205 17573212 + 2R_17573205_17573212_+ 0.628736567 0.628736567 0.628736567 0 CG42239 FBtr0290307 17573200 17573330 2R + 17573156 17573220 stop_codon CG42239 FlyBase G16880.1 TAATTGCTATCAAGACTACGAACCAGAGAAGCAAAAGGATACGTAGACTATGTGCCGGGTTGGAT 23 17573206 0.750190263 11 22 103 0.96 1.380211242 0.36 0.086956522 0.16 23 1 0 24 2R:17573156-17573220 8 CG42239 FBtr0290307 17573200 17573330 ATGTGCCG 8mer-m1 dme-miR-305-3p 2R + 17573179 17573226 stop_codon CG42239 FlyBase G12841.2 CAGAGAAGCAAAAGGATACGTAGACTATGTGCCGGGTTGGATTACCAG 32 17573206 0.636370999 5 30 147 0.9375 1.352182518 0.395833333 0.375 0.583333333 32 2 1 45 2R:17573179-17573226 8 23.5 1544 FBgn0250868 189.67 62.33666667 95.58 0.123899404 0.376985188 0.245867336 -1 -1 -1 0.01 dme-miR-11-3p 7mer-m1 TGTGATG 2R 17573277 17573283 + 2R_17573277_17573283_+ 0.612071121 0.612071121 0.612071121 0 CG42239 FBtr0290307 17573200 17573330 2R + 17573247 17573298 3'utr CG42239 FlyBase G16881.1 TTTATTGCATATATGTATGTATGCAAATTGTGTGATGAATAGAAGAGGGTTT 29 17573275 0.977089508 6 27 214 0.916666667 1.51851394 0.333333333 0.24137931 0.388888889 29 3 0 33 2R:17573247-17573298 7 CG42239 FBtr0290307 17573200 17573330 TGTGATG 7mer-m1 dme-miR-11-3p 2R + 17573238 17573302 3'utr CG42239 FlyBase G12842.1 TTTTATACTTTTATTGCATATATGTATGTATGCAAATTGTGTGATGAATAGAAGAGGGTTTTTGA 30 17573275 0.982820351 6 30 232 1 1.653212514 0.244444444 0.433333333 0.622222222 30 0 0 45 2R:17573238-17573302 7 28.5 1545 FBgn0250868 189.67 62.33666667 95.58 0.15026098 0.457194802 0.298179535 2 2 2 0.01 dme-miR-999-3p 6mer2-7 GTTAAC 2R 17574753 17574758 + 2R_17574753_17574758_+ 1 1 1 0 Rab4 FBtr0086830 17574541 17574979 2R + 17574723 17574768 3'utr Rab4 FlyBase G16889.1 AATTACCACTTTGAAAACCTATGATTTCGGGTTAACCCCAAATGTT 36 17574745 0.703837061 6 34 275 0.928571429 1.591064607 0.095238095 0.166666667 0.285714286 36 3 0 39 2R:17574723-17574768 6 Rab4 FBtr0086830 17574541 17574979 GTTAAC 6mer2-7 dme-miR-999-3p 2R + 17574723 17574765 3'utr Rab4 FlyBase G12846.1 AATTACCACTTTGAAAACCTATGATTTCGGGTTAACCCCAAAT 16 17574744 0.634952727 6 14 115 0.913043478 1.322219295 0.043478261 0.3125 0.52173913 16 2 0 21 2R:17574723-17574765 6 23.5 1546 FBgn0016701 790.7133333 73.45333333 112.1433333 0.02972 0.319931022 0.20955325 8 9 8.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 2R 17574846 17574851 + 2R_17574846_17574851_+ 1 1 1 0 Rab4 FBtr0086830 17574541 17574979 2R + 17574769 17574865 3'utr Rab4 FlyBase G16890.1 ACTTACTATAATTTGTAATTCGTGAAGCACTAGAGCCCTCGAGCAACAAATGATGTATGGCTATAAGCACATGGATCTGATCTAGAGGATGAACAGA 27 17574846 0.966987433 11 25 137 0.939393939 1.491361694 0.575757576 0.185185185 0.333333333 27 2 0 31 2R:17574769-17574865 6 Rab4 FBtr0086830 17574541 17574979 TGATCT 6mer3-8 dme-bantam-3p 2R + 17574817 17574886 3'utr Rab4 FlyBase G12847.1 AATGATGTATGGCTATAAGCACATGGATCTGATCTAGAGGATGAACAGAATACACTCGGCATTTTTAATG 17 17574858 0.958350866 7 17 89 1 1.447158031 0.357142857 0.411764706 0.642857143 17 0 0 28 2R:17574817-17574886 6 14.5 1547 FBgn0016701 790.7133333 73.45333333 112.1433333 0.018337872 0.197404248 0.129298814 0 -12 -6 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 17603202 17603207 + 2R_17603202_17603207_+ 1 1 1 0 Smurf FBtr0333168|FBtr0333168|FBtr0333168|FBtr0086833|FBtr0086833|FBtr0086833 17603185|17603185|17603185|17603185|17603185|17603185 17604461|17604461|17604461|17603981|17603981|17603981 2R + 17603071 17603258 stop_codon Smurf FlyBase G16905.1 CCAAGGCGCACACCTGCTTTAACCGGATCGATTTGCCGCCCTACGAGACGTACCAGCTACTTTGCGACAAGCTGACGCAGGCCGTTGAGGAGACCTGTGGATTTGCCGTGGAGTAAGATCCAGAAGAGACACTGTGACCCTCACCTGATCCACGCATATGCATATACATAGACACCTTTAAATATATT 45 17603204 0.969190671 21 42 226 0.964912281 1.740362689 0.175438596 0.222222222 0.385964912 45 2 0 55 2R:17603071-17603258 6 Smurf FBtr0086833|FBtr0086833|FBtr0086833|FBtr0333168|FBtr0333168|FBtr0333168 17603185|17603185|17603185|17603185|17603185|17603185 17603981|17603981|17603981|17604461|17604461|17604461 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 17603074 17603331 stop_codon Smurf FlyBase G12857.1 AGGCGCACACCTGCTTTAACCGGATCGATTTGCCGCCCTACGAGACGTACCAGCTACTTTGCGACAAGCTGACGCAGGCCGTTGAGGAGACCTGTGGATTTGCCGTGGAGTAAGATCCAGAAGAGACACTGTGACCCTCACCTGATCCACGCATATGCATATACATAGACACCTTTAAATATATTTAGTGCACATTATAAAGAAACATATATCAAGGCGATTTGAAATCAAAATTGTACTGACCCTGGTCAAGATGAT 50 17603204 0.959848513 25 46 235 0.922077922 1.550228353 0.376623377 0.42 0.623376623 50 5 1 71 2R:17603074-17603331 6 12 1548 FBgn0029006 1710.306667 42.38 65.34 0.007016286 0.28315243 0.183654729 -2 -2 -2 0.01 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2R 17603820 17603825 + 2R_17603820_17603825_+ 1 1 1 0 Smurf FBtr0333168|FBtr0086833 17603185|17603185 17604461|17603981 2R + 17603815 17603904 3'utr Smurf FlyBase G16909.1 AGTCCTTTGACACACTTATCGACTTACCCGCTCGCATATTTTATAACTATGCGAGCAAAATGATTGCCTACCCAAAAATAAGATAGGGAA 37 17603833 0.976456222 8 34 228 0.95 1.579783597 0 0.081081081 0.15 37 2 0 38 2R:17603815-17603904 6 Smurf FBtr0086833|FBtr0333168 17603185|17603185 17603981|17604461 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2R + 17603811 17603854 3'utr Smurf FlyBase G12860.1 AAATAGTCCTTTGACACACTTATCGACTTACCCGCTCGCATATT 11 17603833 0.912038211 6 10 61 0.928571429 0.812913357 0.071428571 0.181818182 0.357142857 11 0 1 13 2R:17603811-17603854 6 11.5 1549 FBgn0029006 1710.306667 42.38 65.34 0.00672394 0.271354412 0.176002449 -13 -13 -13 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 17673099 17673105 - 2R_17673099_17673105_- 0.801970437 0.801970437 0.801970437 0 Sema-1b FBtr0086891|FBtr0086891|FBtr0086891|FBtr0086890|FBtr0086890|FBtr0086890 17672837|17672837|17672837|17672837|17672837|17672837 17674309|17674309|17674309|17674309|17674309|17674309 2R - 17673061 17673131 3'utr Sema-1b FlyBase G24433.1 AAACGTAATGTAATGATTTCTCATATTGTGATAGATTTTATTGAAATTTTAGAAAGATGAAATGATATGCC 147 17673106 0.991906343 8 140 1552 0.956756757 1.645913275 0.459459459 0.210884354 0.372972973 147 5 3 177 2R:17673061-17673131 7 Sema-1b FBtr0086890|FBtr0086890|FBtr0086890|FBtr0086891|FBtr0086891|FBtr0086891 17672837|17672837|17672837|17672837|17672837|17672837 17674309|17674309|17674309|17674309|17674309|17674309 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 17673090 17673132 3'utr Sema-1b FlyBase G18485.1 AAAACGTAATGTAATGATTTCTCATATTGTGATAGATTTTATT 95 17673106 0.751582062 6 93 987 0.98630137 1.857332496 0.328767123 0.347368421 0.575342466 95 1 1 144 2R:17673090-17673132 7 120 1550 FBgn0016059 2585.713333 78.05 119.2733333 0.046408857 1.537475977 1.006092449 1 1 1 0.01 dme-miR-282-5p 6mer2-7 GAGGCT 2R 17673567 17673572 - 2R_17673567_17673572_- 1 1 1 0 Sema-1b FBtr0086891|FBtr0302161|FBtr0086890 17672837|17673285|17672837 17674309|17674309|17674309 2R - 17673537 17673638 3'utr Sema-1b FlyBase G24435.1 TAAGGAATTGAACATAGAATGTAATTAAAAGTACGAACTAGGCTAAGAAACGAAGAAAACTTCTATGAGGCTGTTTGATAAGAACTGACACCGCAGCCCCCA 250 17673573 0.99021527 11 243 1776 0.975945017 1.976197085 0.18556701 0.144 0.264604811 250 5 2 284 2R:17673537-17673638 6 Sema-1b FBtr0086890|FBtr0302161|FBtr0086891 17672837|17673285|17672837 17674309|17674309|17674309 GAGGCT 6mer2-7 dme-miR-282-5p 2R - 17673535 17673594 3'utr Sema-1b FlyBase G18488.1 AAGAAACGAAGAAAACTTCTATGAGGCTGTTTGATAAGAACTGACACCGCAGCCCCCACA 170 17673573 0.981792446 8 163 1198 0.958333333 1.662757832 0.2375 0.311764706 0.5125 170 6 4 230 2R:17673535-17673594 6 202.5 1551 FBgn0016059 2585.713333 78.05 119.2733333 0.078314946 2.594490711 1.697781007 1 1 1 0.01 dme-miR-970-3p 6mer2-7 CTTATG 2R 17673910 17673915 - 2R_17673910_17673915_- 1 1 1 0 Sema-1b FBtr0086891|FBtr0302161|FBtr0086890 17672837|17673285|17672837 17674309|17674309|17674309 2R - 17673791 17673949 3'utr Sema-1b FlyBase G24436.1 CGGCTCTTGGCTACGCAGCCCGATTGTGTCGCCCCTTATGTGTACTCTTAATGTATAATCTTTAAGTGCAAATATTAGAGCTGTACAAATTTAATCACATATCATGCATACCGAAATCGAACCCGAAGCGGACCAGCCCCAATTATTTCTCGAAATTCA 32 17673912 0.988397605 19 28 256 0.871794872 1.531478917 0.205128205 0.1875 0.333333333 32 5 0 34 2R:17673791-17673949 6 Sema-1b FBtr0086890|FBtr0302161|FBtr0086891 17672837|17673285|17672837 17674309|17674309|17674309 CTTATG 6mer2-7 dme-miR-970-3p 2R - 17673888 17673982 3'utr Sema-1b FlyBase G18491.1 GACGTCGACCTTTGCTGTCCAAAATAGGAGTGCCGGCTCTTGGCTACGCAGCCCGATTGTGTCGCCCCTTATGTGTACTCTTAATGTATAATCTT 14 17673911 0.979516863 8 11 92 1 1.380211242 0.25 0.571428571 0.75 14 0 0 24 2R:17673888-17673982 6 8 1552 FBgn0016059 2585.713333 78.05 119.2733333 0.003093924 0.102498398 0.06707283 -3 -4 -3.5 0.01 dme-miR-278-3p 6mer3-8 CCCACC 2R 17674209 17674214 - 2R_17674209_17674214_- 1 1 1 0 Sema-1b FBtr0086891|FBtr0302161|FBtr0086890 17672837|17673285|17672837 17674309|17674309|17674309 2R - 17674183 17674316 stop_codon Sema-1b FlyBase G24438.1 CATCTAGTGGCCTTGTGAGGGCAGCCAACTGCAAAATTAGTCGAATTTCTATACTCTAAAACATATTTTCGTTGTTTATGTTGCTGTTAGTTATAGTAACCCCCCACCCAATTTGCGAATAATGTAAACGACAG 34 17674205 0.827135904 18 33 224 0.975609756 1.602059991 0.170731707 0.205882353 0.341463415 34 1 0 40 2R:17674183-17674316 6 Sema-1b FBtr0086890|FBtr0302161|FBtr0086891 17672837|17673285|17672837 17674309|17674309|17674309 CCCACC 6mer3-8 dme-miR-278-3p 2R - 17674202 17674239 3'utr Sema-1b FlyBase G18492.1 ATGTTGCTGTTAGTTATAGTAACCCCCCACCCAATTTG 8 17674230 0.873185365 4 7 54 0.769230769 1 0.076923077 0.375 0.615384615 8 3 0 10 2R:17674202-17674239 6 11 1553 FBgn0016059 2585.713333 78.05 119.2733333 0.004254145 0.140935298 0.092225141 -9 16 3.5 0.01 dme-bantam-3p 6mer2-7 GATCTC 2R 17690185 17690190 + 2R_17690185_17690190_+ 1 1 1 0 HPS4 FBtr0086839|FBtr0086840 17690041|17690041 17690822|17690822 2R + 17690145 17690210 3'utr HPS4 FlyBase G16946.1 GAATAGCCAACTTAATGCCATCCACTGTTATTTCATTTGCGATCTCTGGCTGATTCCTTCGTGAGT 258 17690181 0.890951336 11 244 2630 0.948717949 1.772321707 0.298076923 0.186046512 0.326923077 258 12 4 296 2R:17690145-17690210 6 HPS4 FBtr0086839|FBtr0086840 17690041|17690041 17690822|17690822 GATCTC 6mer2-7 dme-bantam-3p 2R + 17690130 17690211 3'utr HPS4 FlyBase G12894.1 GTCTGGGTCCCCGAAGAATAGCCAACTTAATGCCATCCACTGTTATTTCATTTGCGATCTCTGGCTGATTCCTTCGTGAGTC 153 17690181 0.879159978 15 140 1519 0.894495413 1.511883361 0.408256881 0.320261438 0.52293578 153 18 5 195 2R:17690130-17690211 6 157.5 1554 FBgn0034261 255.3 8.836666667 13.49666667 0.616921269 17.82346284 11.66954804 4 4 4 0.01 dme-miR-1006-3p 6mer2-7 GAATTT 2R 17690383 17690388 + 2R_17690383_17690388_+ 1 0.988724442 0.994362221 0.007973053 HPS4 FBtr0086839|FBtr0086840 17690041|17690041 17690822|17690822 2R + 17690354 17690428 3'utr HPS4 FlyBase G16947.1 ATTCAATGGACTCACGAAGGAAACCAAAAGAATTTTAGATATGCCGCTTACAGCCAGCGAAATATTAAGCCTTGT 63 17690402 0.863888231 9 61 233 0.973333333 1.386201605 0.066666667 0.142857143 0.28 63 0 2 73 2R:17690354-17690428 6 HPS4 FBtr0086839|FBtr0086840 17690041|17690041 17690822|17690822 GAATTT 6mer2-7 dme-miR-1006-3p 2R + 17690356 17690423 3'utr HPS4 FlyBase G12895.1 TCAATGGACTCACGAAGGAAACCAAAAGAATTTTAGATATGCCGCTTACAGCCAGCGAAATATTAAGC 53 17690402 0.885724374 6 49 192 0.971428571 1.531478917 0.114285714 0.283018868 0.457142857 53 1 1 68 2R:17690356-17690423 6 15 1555 FBgn0034261 255.3 8.836666667 13.49666667 0.058754407 1.697472652 1.111385527 -19 -19 -19 0.01 dme-miR-190-5p 6mer2-7 CATATC 2R 17725246 17725251 - 2R_17725246_17725251_- 1 1 1 0 Snx16 FBtr0086885 17725028 17725381 2R - 17725219 17725323 3'utr Snx16 FlyBase G24461.1 ATTATGCTGAGCATAACTCTACGCAACTGCGCCGCTTGGATGCAAATCCAATACAATAATACAAACCAAGTGCATATCGAGGGGTTGGCCCCTACAGTGCTTTAG 85 17725253 0.959123511 10 83 400 0.97826087 1.954242509 0.010869565 0.082352941 0.152173913 85 2 0 90 2R:17725219-17725323 6 Snx16 FBtr0086885 17725028 17725381 CATATC 6mer2-7 dme-miR-190-5p 2R - 17725227 17725267 3'utr Snx16 FlyBase G18506.1 TAATACAAACCAAGTGCATATCGAGGGGTTGGCCCCTACAG 29 17725253 0.97676911 2 28 134 0.981132075 1.716003344 0 0.482758621 0.716981132 29 1 0 52 2R:17725227-17725267 6 55 1556 FBgn0034265 197.3333333 14.34666667 22.20333333 0.278716216 3.833643123 2.47710554 2 2 2 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 2R 17734456 17734461 - 2R_17734456_17734461_- 1 1 1 0 CG6406 FBtr0086883|FBtr0086884 17734417|17734417 17735315|17735315 2R - 17734426 17734474 3'utr CG6406 FlyBase G24467.1 TATTTATTGAACGTTGACTTGAACCATGTTATTGATTTAAAATAAATAC 9 17734461 0.938153825 3 9 82 1 0.954242509 0.222222222 0 0 9 0 0 9 2R:17734426-17734474 6 CG6406 FBtr0086883|FBtr0086884 17734417|17734417 17735315|17735315 TTGACT 6mer3-8 dme-miR-1012-3p 2R - 17734427 17734483 3'utr CG6406 FlyBase G18510.1 ACATACAAATATTTATTGAACGTTGACTTGAACCATGTTATTGATTTAAAATAAATA 9 17734461 0.75691775 5 9 78 1 1.113943352 0.076923077 0.222222222 0.461538462 9 0 0 13 2R:17734427-17734483 6 8.5 1557 FBgn0034269 376.6666667 16.84333333 25.91666667 0.022566372 0.504650703 0.327974277 0 0 0 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 17734916 17734921 - 2R_17734916_17734921_- 1 1 1 0 CG6406 FBtr0086883|FBtr0086884 17734417|17734417 17735315|17735315 2R - 17734768 17734933 3'utr CG6406 FlyBase G24468.1 TCGCCACCTACCGCTGTGTATTAGCCGAATAGAACCGTGGCTCGAAATTTGAATTTATGGCATAAGCATCGTTTGAGTTTGTTGACTTTGATGGGTTTTCTTAGTTGTTCGTATGTATTATCGTATTCCAAATCCAATTGTTGGTTAGATTAAGTGTTGCTAGGAC 19 17734913 0.984658693 13 19 168 1 1.278753601 0.315789474 0 0 19 0 0 19 2R:17734768-17734933 6 CG6406 FBtr0086883|FBtr0086884 17734417|17734417 17735315|17735315 GCTGTG 6mer2-7 dme-miR-1008-3p 2R - 17734880 17734943 3'utr CG6406 FlyBase G18511.1 ATGTGTACATTCGCCACCTACCGCTGTGTATTAGCCGAATAGAACCGTGGCTCGAAATTTGAAT 10 17734925 0.746540287 8 9 59 0.866666667 0.636822098 0.2 0.4 0.6 10 0 2 13 2R:17734880-17734943 6 6.5 1558 FBgn0034269 376.6666667 16.84333333 25.91666667 0.017256637 0.385909361 0.250803859 -8 4 -2 0.01 dme-bantam-3p 6mer2-7 GATCTC 2R 17743608 17743613 + 2R_17743608_17743613_+ 1 1 1 0 CG4996 FBtr0086864 17743444 17743969 2R + 17743532 17743682 3'utr CG4996 FlyBase G16974.1 ACGTGTAATTAACATTCCGTTTAGTTCAAATTAACATTGTGTTTAAGGCTAATGATTCTACCTTAGTTATACAGGCGATCTCCATGAAGTACTTCGTTTCAAATTTAGAATCTCCCAAACCCTCCTTAAGTGCAATCTATCCTATAATCTT 154 17743599 0.789395629 24 147 1196 0.95480226 1.75076545 0.15819209 0.12987013 0.242937853 154 6 2 169 2R:17743532-17743682 6 CG4996 FBtr0086864 17743444 17743969 GATCTC 6mer2-7 dme-bantam-3p 2R + 17743486 17743680 3'utr CG4996 FlyBase G12917.1 AACCCCAAACTAACTTTGTTAGTAGATCAATCTCATGACATTCTTTACGTGTAATTAACATTCCGTTTAGTTCAAATTAACATTGTGTTTAAGGCTAATGATTCTACCTTAGTTATACAGGCGATCTCCATGAAGTACTTCGTTTCAAATTTAGAATCTCCCAAACCCTCCTTAAGTGCAATCTATCCTATAATC 127 17743616 0.850157595 22 116 980 0.93442623 1.755874856 0.147540984 0.322834646 0.530054645 127 10 2 171 2R:17743486-17743680 6 46.5 1559 FBgn0034271 397.55 13.71666667 20.99666667 0.116966419 3.390036452 2.214637244 9 -8 0.5 0.01 dme-miR-92b-3p 7mer-m8 GTGCAAT 2R 17743661 17743667 + 2R_17743661_17743667_+ 0.659000077 0.659000077 0.659000077 0 CG4996 FBtr0086864 17743444 17743969 2R + 17743532 17743682 3'utr CG4996 FlyBase G16974.1 ACGTGTAATTAACATTCCGTTTAGTTCAAATTAACATTGTGTTTAAGGCTAATGATTCTACCTTAGTTATACAGGCGATCTCCATGAAGTACTTCGTTTCAAATTTAGAATCTCCCAAACCCTCCTTAAGTGCAATCTATCCTATAATCTT 154 17743657 0.789395629 24 147 1196 0.95480226 1.75076545 0.15819209 0.12987013 0.242937853 154 6 2 169 2R:17743532-17743682 7 CG4996 FBtr0086864 17743444 17743969 GTGCAAT 7mer-m8 dme-miR-92b-3p 2R + 17743486 17743680 3'utr CG4996 FlyBase G12917.1 AACCCCAAACTAACTTTGTTAGTAGATCAATCTCATGACATTCTTTACGTGTAATTAACATTCCGTTTAGTTCAAATTAACATTGTGTTTAAGGCTAATGATTCTACCTTAGTTATACAGGCGATCTCCATGAAGTACTTCGTTTCAAATTTAGAATCTCCCAAACCCTCCTTAAGTGCAATCTATCCTATAATC 127 17743657 0.850157595 22 116 980 0.93442623 1.755874856 0.147540984 0.322834646 0.530054645 127 10 2 171 2R:17743486-17743680 7 30 1560 FBgn0034271 397.55 13.71666667 20.99666667 0.075462206 2.187120292 1.428798222 4 4 4 0.01 dme-miR-304-5p 8mer-A1 TGAGATTA 2R 17841112 17841119 + 2R_17841112_17841119_+ 0.625363359 0.625363359 0.625363359 0 grh FBtr0300539|FBtr0306625|FBtr0300541|FBtr0299705|FBtr0299707|FBtr0345791|FBtr0299706 17840873|17840873|17840873|17840873|17840873|17840873|17840873 17842820|17841528|17841528|17841613|17841613|17841613|17841613 2R + 17841090 17841127 5'utr grh FlyBase G17014.1 GATTTAGTTATTTTAGCAACAATGAGATTATCTAAAAT 17 17841112 0.952336697 3 16 133 1 1.230448921 0 0 0 17 0 0 17 2R:17841090-17841127 8 grh FBtr0299706|FBtr0299707|FBtr0345791|FBtr0300541|FBtr0299705|FBtr0300539|FBtr0306625 17840873|17840873|17840873|17840873|17840873|17840873|17840873 17841613|17841613|17841613|17841528|17841613|17842820|17841528 TGAGATTA 8mer-A1 dme-miR-304-5p 2R + 17841095 17841144 5'utr grh FlyBase G12955.1 AGTTATTTTAGCAACAATGAGATTATCTAAAATTGTTTGATCAAATTTTA 13 17841112 0.979994809 2 12 91 1 1.278753601 0.105263158 0.384615385 0.578947368 13 0 0 19 2R:17841095-17841144 8 13.5 1561 FBgn0259211 11.04666667 0.27 0.426666667 1.222088111 50 31.640625 0 0 0 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 17859909 17859915 + 2R_17859909_17859915_+ 0.801970437 0.801970437 0.801970437 0 olf186-F FBtr0086795|FBtr0086795|FBtr0086795|FBtr0086797|FBtr0086797|FBtr0086797|FBtr0336699|FBtr0336699|FBtr0336699|FBtr0114614|FBtr0114614|FBtr0114614|FBtr0336698|FBtr0336698|FBtr0336698 17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793 17860582|17860582|17860582|17860582|17860582|17860582|17860582|17860582|17860582|17860284|17860284|17860284|17860582|17860582|17860582 2R + 17859883 17859939 3'utr olf186-F FlyBase G17044.1 ATTGTAAATTTGTAGTTGATTAAAATTGTGATACGCGGAATTCAGTAGATTTCTACT 413 17859908 0.719855606 17 384 3002 0.940357853 1.352641846 0.355864811 0.181598063 0.328031809 413 10 20 473 2R:17859883-17859939 7 olf186-F FBtr0336698|FBtr0336698|FBtr0336698|FBtr0114614|FBtr0114614|FBtr0114614|FBtr0336699|FBtr0336699|FBtr0336699|FBtr0086797|FBtr0086797|FBtr0086797|FBtr0086795|FBtr0086795|FBtr0086795 17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793 17860582|17860582|17860582|17860284|17860284|17860284|17860582|17860582|17860582|17860582|17860582|17860582|17860582|17860582|17860582 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 17859885 17859940 3'utr olf186-F FlyBase G12974.2 TGTAAATTTGTAGTTGATTAAAATTGTGATACGCGGAATTCAGTAGATTTCTACTA 288 17859908 0.72611939 12 258 2037 0.90521327 1.303309762 0.362559242 0.374125874 0.575829384 286 22 18 382 2R:17859885-17859940 7 338 1562 FBgn0041585 1045.89 35.90333333 55.08666667 0.323169741 9.414167672 6.135786034 1 1 1 0.01 dme-miR-7-5p 7mer-m8 GTCTTCC 2R 17860163 17860169 + 2R_17860163_17860169_+ 0.705950313 0.641633771 0.673792042 0.045478633 olf186-F FBtr0086795|FBtr0086797|FBtr0336699|FBtr0114614|FBtr0336698 17859793|17859793|17859793|17859793|17859793 17860582|17860582|17860582|17860284|17860582 2R + 17860112 17860175 3'utr olf186-F FlyBase G17045.1 TTAAATTGTATGCCATGCCGGATTTTCTTTTTTTGCAACCATCCTTAGGCAGTCTTCCCTTTTT 42 17860156 0.913695904 7 40 314 0.941176471 1.380211242 0.098039216 0.214285714 0.352941176 42 2 1 48 2R:17860112-17860175 7 olf186-F FBtr0336698|FBtr0114614|FBtr0336699|FBtr0086797|FBtr0086795 17859793|17859793|17859793|17859793|17859793 17860582|17860284|17860582|17860582|17860582 GTCTTCC 7mer-m8 dme-miR-7-5p 2R + 17860109 17860169 3'utr olf186-F FlyBase G12976.1 ATTTTAAATTGTATGCCATGCCGGATTTTCTTTTTTTGCAACCATCCTTAGGCAGTCTTCC 34 17860156 0.80638871 8 31 259 0.891304348 1.612783857 0.108695652 0.294117647 0.47826087 34 5 0 41 2R:17860109-17860169 7 15.5 1563 FBgn0041585 1045.89 35.90333333 55.08666667 0.014819914 0.43171479 0.281374803 7 7 7 0.01 dme-miR-283-5p 6mer3-8 TGATAT 2R 17860314 17860319 + 2R_17860314_17860319_+ 1 1 1 0 olf186-F FBtr0086795|FBtr0086797|FBtr0336699|FBtr0336698 17859793|17859793|17859793|17859793 17860582|17860582|17860582|17860582 2R + 17860289 17860329 3'utr olf186-F FlyBase G17046.1 GGTGTTGGAGTTTTATTTTTAATCGTGATATATAGCTGAAC 8 17860310 0.981825556 5 8 83 1 0.954242509 0.222222222 0.125 0.222222222 8 0 0 9 2R:17860289-17860329 6 olf186-F FBtr0336698|FBtr0336699|FBtr0086797|FBtr0086795 17859793|17859793|17859793|17859793 17860582|17860582|17860582|17860582 TGATAT 6mer3-8 dme-miR-283-5p 2R + 17860300 17860329 3'utr olf186-F FlyBase G12977.1 TTTATTTTTAATCGTGATATATAGCTGAAC 13 17860307 0.57907223 5 13 125 1 1.230448921 0.411764706 0.230769231 0.411764706 13 0 0 17 2R:17860300-17860329 6 10.5 1564 FBgn0041585 1045.89 35.90333333 55.08666667 0.010039297 0.292451954 0.190608738 4 7 5.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 2R 17867199 17867204 - 2R_17867199_17867204_- 1 1 1 0 Mapmodulin FBtr0086822|FBtr0300410|FBtr0086823|FBtr0113091 17866176|17866317|17866317|17867036 17867209|17867209|17867209|17867209 2R - 17867172 17867226 stop_codon Mapmodulin FlyBase G24543.1 GAAAGCATGATGGTTAAAACCCTGATCTGTCGGTATAGCGTCTTTGTACGTTATA 23 17867204 0.714524877 7 22 170 0.966666667 1.161368002 0.133333333 0.260869565 0.433333333 23 0 1 29 2R:17867172-17867226 6 Mapmodulin FBtr0300410|FBtr0086822|FBtr0086823 17866317|17866176|17866317 17867209|17867209|17867209 TGATCT 6mer3-8 dme-bantam-3p 2R - 17867151 17867219 stop_codon Mapmodulin FlyBase G18567.1 TGATGGTTAAAACCCTGATCTGTCGGTATAGCGTCTTTGTACGTTATAAATTTAAATATACACCCACAC 7 17867204 0.980005899 5 7 53 1 1 0 0.428571429 0.6 7 0 0 10 2R:17867151-17867219 6 14.5 1565 FBgn0034282 4492.536667 281.28 432.79 0.003227575 0.051550057 0.033503547 0 0 0 0.01 dme-miR-995-5p 6mer3-8 AATTCG 2R 18100409 18100414 + 2R_18100409_18100414_+ 1 1 1 0 CG5098 FBtr0329994|FBtr0346952|FBtr0113092|FBtr0086732 18100252|18100207|18100207|18100207 18101031|18101031|18101031|18101031 2R + 18100309 18100410 3'utr CG5098 FlyBase G17060.1 CCGCAGCTCGCTGCATCATTTACTTAAGCTTTGTACATAAGTTTCCGACCGCCGTCGTCGCCAGGAGGGCATTTCGTAATCCAAGAAGTGATTTTGTATAAA 26 18100401 0.98315083 6 24 180 0.941176471 1.505149978 0.411764706 0.230769231 0.411764706 26 2 0 32 2R:18100309-18100410 2 CG5098 FBtr0113092|FBtr0086732|FBtr0329994|FBtr0346952 18100207|18100207|18100252|18100207 18101031|18101031|18101031|18101031 AATTCG 6mer3-8 dme-miR-995-5p 2R + 18100345 18100503 3'utr CG5098 FlyBase G12991.1 ATAAGTTTCCGACCGCCGTCGTCGCCAGGAGGGCATTTCGTAATCCAAGAAGTGATTTTGTATAAATTCGCTGTACATTTTAAGGCTTGACGCACAGCATAGACGATATCAAAGCGTTTGCCACGTTATAGTTAGGTTCCCTTCCCCAAACCTTTAGTT 30 18100401 0.981416668 13 30 220 1 1.612783857 0.365853659 0.333333333 0.512195122 30 0 0 41 2R:18100345-18100503 6 6 1566 FBgn0034300 227 5.456666667 8.356666667 0.026431718 1.099572389 0.717989629 8 8 8 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2R 18100562 18100567 + 2R_18100562_18100567_+ 1 1 1 0 CG5098 FBtr0329994|FBtr0346952|FBtr0113092|FBtr0086732 18100252|18100207|18100207|18100207 18101031|18101031|18101031|18101031 2R + 18100531 18100626 3'utr CG5098 FlyBase G17062.1 ATTTTTTCGCATAGTCCAGAACTTTACATTAGTACCTTTTAGTTCTAACTAATTTTAAAACCACCAGCCCATGTCCTATGCCCACCCATCTGCATC 76 18100569 0.864456841 14 75 707 0.989010989 1.954242509 0.142857143 0.157894737 0.296703297 76 1 0 90 2R:18100531-18100626 6 CG5098 FBtr0113092|FBtr0086732|FBtr0329994|FBtr0346952 18100207|18100207|18100252|18100207 18101031|18101031|18101031|18101031 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2R + 18100504 18100620 3'utr CG5098 FlyBase G12992.1 GTTTATGTTTAAGATACGTCCTAAATTATTTTTTCGCATAGTCCAGAACTTTACATTAGTACCTTTTAGTTCTAACTAATTTTAAAACCACCAGCCCATGTCCTATGCCCACCCATC 62 18100569 0.989677844 12 60 590 0.957446809 1.954242509 0.117021277 0.322580645 0.553191489 62 4 0 90 2R:18100504-18100620 6 52.5 1567 FBgn0034300 227 5.456666667 8.356666667 0.231277533 9.6212584 6.282409254 -7 -7 -7 0.01 dme-miR-8-3p 8mer-A1 CAGTATTA 2R 18118379 18118386 - 2R_18118379_18118386_- 0.628101639 0.666881448 0.647491544 0.02742146 stau FBtr0086783|FBtr0086784 18117894|18117894 18119780|18119780 2R - 18118351 18118425 3'utr stau FlyBase G24567.2 AGCCCCAGCGAACTGTAACCGTTGAAATGAAGTCAATCCCAGTATTAAATGTATAGATAGGGGGCAGTTGTGCGT 19 18118389 0.974347486 7 15 114 0.875 1.322219295 0.125 0.263157895 0.416666667 19 3 0 21 2R:18118351-18118425 8 stau FBtr0086784|FBtr0086783 18117894|18117894 18119780|18119780 CAGTATTA 8mer-A1 dme-miR-8-3p 2R - 18118359 18118426 3'utr stau FlyBase G18586.1 AAGCCCCAGCGAACTGTAACCGTTGAAATGAAGTCAATCCCAGTATTAAATGTATAGATAGGGGGCAG 9 18118389 0.968322356 6 8 43 1 1.322219295 0.142857143 0.666666667 0.857142857 9 0 0 21 2R:18118359-18118426 8 9 1568 FBgn0003520 789.19 18.35 28.11 0.011404098 0.490463215 0.320170758 3 3 3 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA 2R 18119051 18119056 - 2R_18119051_18119056_- 1 1 1 0 stau FBtr0086783|FBtr0086784 18117894|18117894 18119780|18119780 2R - 18119024 18119089 3'utr stau FlyBase G24571.1 ACGACAACCATGAACCGTTTGTGGTCATATGCTTGATGAAACTCGTCGAATAATGAATCTATTATA 16 18119036 0.985857462 8 15 124 0.9375 0.875061263 0.1875 0 0 16 0 1 15 2R:18119024-18119089 6 stau FBtr0086784|FBtr0086783 18117894|18117894 18119780|18119780 TGATGA 6mer3-8 dme-miR-2a-2-5p 2R - 18119003 18119094 3'utr stau FlyBase G18587.1 AAAGCACGACAACCATGAACCGTTTGTGGTCATATGCTTGATGAAACTCGTCGAATAATGAATCTATTATACGTATACTATATTTAAGTGTT 17 18119037 0.978625422 11 17 120 1 1.380211242 0 0.294117647 0.5 17 0 0 24 2R:18119003-18119094 6 8.5 1569 FBgn0003520 789.19 18.35 28.11 0.010770537 0.463215259 0.302383493 -20 -19 -19.5 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA 2R 18119263 18119268 - 2R_18119263_18119268_- 1 1 1 0 stau FBtr0086783|FBtr0086784 18117894|18117894 18119780|18119780 2R - 18119212 18119383 3'utr stau FlyBase G24573.1 GAACAATAACTAGACTTAATGAAAACCCAACAAAATCATGAATGAACAGATGCATATATACATATGTGCAGTACCTAAACTTAAGATTAAAGCTCATTAACCACTTGAATTGAATTGATGAACAAAGGACTATTGATACCTCTTAGCTGCATGCGGCAATCGCTTTCAAAAA 75 18119250 0.973007682 14 71 438 0.946808511 1.648360011 0.276595745 0.24 0.393617021 75 4 1 89 2R:18119212-18119383 6 stau FBtr0086784|FBtr0086783 18117894|18117894 18119780|18119780 TGATGA 6mer3-8 dme-miR-2a-2-5p 2R - 18119213 18119283 3'utr stau FlyBase G18589.1 CCACTTGAATTGAATTGATGAACAAAGGACTATTGATACCTCTTAGCTGCATGCGGCAATCGCTTTCAAAA 41 18119241 0.977042588 6 39 279 0.983606557 1.77815125 0.426229508 0.317073171 0.540983607 41 1 0 60 2R:18119213-18119283 6 13 1570 FBgn0003520 789.19 18.35 28.11 0.016472586 0.708446866 0.462468872 -18 -27 -22.5 0.01 dme-miR-932-5p 7mer-A1 GAATTGA 2R 18119471 18119477 - 2R_18119471_18119477_- 0.823349562 0.823349562 0.823349562 0 stau FBtr0086783|FBtr0086784 18117894|18117894 18119780|18119780 2R - 18119419 18119480 3'utr stau FlyBase G24574.1 TGAGAATTGAATAACGAATCGAACTGATAGTAACCGAAACTGAACAGAGGCGAACACTTAAC 14 18119453 0.939947215 5 14 54 1 1.255272505 0.166666667 0.285714286 0.444444444 14 0 0 18 2R:18119419-18119480 7 stau FBtr0086784|FBtr0086783 18117894|18117894 18119780|18119780 GAATTGA 7mer-A1 dme-miR-932-5p 2R - 18119421 18119479 3'utr stau FlyBase G18591.1 GAGAATTGAATAACGAATCGAACTGATAGTAACCGAAACTGAACAGAGGCGAACACTTA 17 18119452 0.955733922 7 15 67 0.913043478 1.322219295 0.47826087 0.294117647 0.47826087 17 2 0 21 2R:18119421-18119479 7 8.5 1571 FBgn0003520 789.19 18.35 28.11 0.010770537 0.463215259 0.302383493 -24 -25 -24.5 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA 2R 18119508 18119513 - 2R_18119508_18119513_- 1 1 1 0 stau FBtr0086783|FBtr0086784 18117894|18117894 18119780|18119780 2R - 18119486 18119531 3'utr stau FlyBase G24575.1 TATTTATGTGTGCACGTTGTGCAAACTGGTGTTATTATTTTATTTA 10 18119505 0.834196479 7 10 109 1 1.041392685 0.363636364 0.1 0.181818182 10 0 0 11 2R:18119486-18119531 6 stau FBtr0086784|FBtr0086783 18117894|18117894 18119780|18119780 GTGCAA 6mer3-8 dme-miR-92b-3p 2R - 18119493 18119518 3'utr stau FlyBase G18592.1 ACGTTGTGCAAACTGGTGTTATTATT 5 18119497 0.686507538 4 5 36 1 1.113943352 0.538461538 0.8 0.923076923 5 0 0 13 2R:18119493-18119518 6 7.5 1572 FBgn0003520 789.19 18.35 28.11 0.009503415 0.408719346 0.266808965 -8 -16 -12 0.01 dme-miR-92b-3p 7mer-m1 TGCAATT 2R 18119736 18119742 - 2R_18119736_18119742_- 0.765586663 0.765586663 0.765586663 0 stau FBtr0086783|FBtr0086784 18117894|18117894 18119780|18119780 2R - 18119710 18119794 stop_codon stau FlyBase G24578.1 ATGCCATGAAATAAGCATAAAGCGCTGAAAATTTCACAAAACCCTTATTAACTGCAATTTTTGTTGTTGCACATAAGCATGATAA 28 18119744 0.989184775 12 23 213 0.833333333 1.176091259 0.027777778 0.214285714 0.388888889 28 5 1 30 2R:18119710-18119794 7 stau FBtr0086784|FBtr0301614|FBtr0086783 18117894|18119622|18117894 18119780|18119780|18119780 TGCAATT 7mer-m1 dme-miR-92b-3p 2R - 18119711 18119775 3'utr stau FlyBase G18594.1 AAGCGCTGAAAATTTCACAAAACCCTTATTAACTGCAATTTTTGTTGTTGCACATAAGCATGATA 23 18119741 0.993817712 7 15 187 0.675 1.431363764 0.075 0.434782609 0.675 23 13 0 27 2R:18119711-18119775 7 19 1573 FBgn0003520 789.19 18.35 28.11 0.024075318 1.035422343 0.675916044 2 -1 0.5 0.01 dme-miR-283-5p 6mer3-8 TGATAT 2R 18130559 18130564 - 2R_18130559_18130564_- 1 1 1 0 Hsf FBtr0086782|FBtr0110965|FBtr0110966|FBtr0110964 18130301|18130301|18130301|18130301 18130754|18130754|18130754|18130754 2R - 18130501 18130612 3'utr Hsf FlyBase G24589.1 CACTATAATCATATGAATGATCTGTATATGCCTTATGCACTATATATATGATATATAGACTAACCAGTTCTTGTTGTAGAAAGACTCGAAGAATCAGTAAAGATTTAGATTT 49 18130557 0.98706046 10 46 403 0.945454545 1.716003344 0.018181818 0.081632653 0.181818182 49 3 0 52 2R:18130501-18130612 6 Hsf FBtr0110966|FBtr0110964|FBtr0086782|FBtr0110965 18130301|18130301|18130301|18130301 18130754|18130754|18130754|18130754 TGATAT 6mer3-8 dme-miR-283-5p 2R - 18130519 18130639 3'utr Hsf FlyBase G18603.1 GATTCATACGATAATCACATTAATAACCACTATAATCATATGAATGATCTGTATATGCCTTATGCACTATATATATGATATATAGACTAACCAGTTCTTGTTGTAGAAAGACTCGAAGAAT 35 18130557 0.985614319 12 34 282 0.976190476 1.311753861 0.071428571 0.2 0.333333333 35 0 1 41 2R:18130519-18130639 6 17.5 1574 FBgn0001222 975.6666667 42.15 64.28666667 0.017936454 0.415183867 0.272218189 -7 -7 -7 0.01 dme-bantam-3p 6mer3-8 TGATCT 2R 18130590 18130595 - 2R_18130590_18130595_- 1 1 1 0 Hsf FBtr0086782|FBtr0110965|FBtr0110966|FBtr0110964 18130301|18130301|18130301|18130301 18130754|18130754|18130754|18130754 2R - 18130501 18130612 3'utr Hsf FlyBase G24589.1 CACTATAATCATATGAATGATCTGTATATGCCTTATGCACTATATATATGATATATAGACTAACCAGTTCTTGTTGTAGAAAGACTCGAAGAATCAGTAAAGATTTAGATTT 49 18130595 0.98706046 10 46 403 0.945454545 1.716003344 0.018181818 0.081632653 0.181818182 49 3 0 52 2R:18130501-18130612 6 Hsf FBtr0110966|FBtr0110964|FBtr0086782|FBtr0110965 18130301|18130301|18130301|18130301 18130754|18130754|18130754|18130754 TGATCT 6mer3-8 dme-bantam-3p 2R - 18130519 18130639 3'utr Hsf FlyBase G18603.1 GATTCATACGATAATCACATTAATAACCACTATAATCATATGAATGATCTGTATATGCCTTATGCACTATATATATGATATATAGACTAACCAGTTCTTGTTGTAGAAAGACTCGAAGAAT 35 18130595 0.985614319 12 34 282 0.976190476 1.311753861 0.071428571 0.2 0.333333333 35 0 1 41 2R:18130519-18130639 6 20.5 1575 FBgn0001222 975.6666667 42.15 64.28666667 0.021011274 0.486358244 0.318884165 0 0 0 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 2R 18139387 18139392 + 2R_18139387_18139392_+ 1 1 1 0 Pcl FBtr0086735|FBtr0329998 18139235|18139235 18139442|18139990 2R + 18139345 18139432 3'utr Pcl FlyBase G17085.1 TGTTAATGTTTAAAAGTTTATTACCAACCCACTGCCAAAATAGAAAAAGATTGTTCAAAATATTGGTTCAGCATTAAAGCGATAAAAT 19 18139395 0.961262431 6 19 98 1 1.342422681 0.136363636 0.157894737 0.272727273 19 0 0 22 2R:18139345-18139432 6 Pcl FBtr0086735|FBtr0329998 18139235|18139235 18139442|18139990 GAAAAA 6mer3-8 dme-miR-980-5p 2R + 18139357 18139428 3'utr Pcl FlyBase G13008.1 AAAGTTTATTACCAACCCACTGCCAAAATAGAAAAAGATTGTTCAAAATATTGGTTCAGCATTAAAGCGATA 13 18139395 0.800346722 7 13 70 1 1.176091259 0.066666667 0.153846154 0.266666667 13 0 0 15 2R:18139357-18139428 6 11.5 1576 FBgn0003044 1047.913333 31.18 47.85 0.01097419 0.368826171 0.240334378 -8 -8 -8 0.01 dme-miR-988-3p 7mer-A1 CAAGGGA 2R 18146837 18146843 + 2R_18146837_18146843_+ 0.782911824 0.782911824 0.782911824 0 pAbp FBtr0086740 18145219 18147191 2R + 18146675 18146952 3'utr pAbp FlyBase G17106.1 AAACAAATAAAAACCCAAGGAAAAATCATTGAAAAAATTGCAAAACACAAAACCACATGTATGCAGAAAATGCAAAATTATTTAAAAAAAACAAACAAACAAAATAATGAGAGTAAAACAGAAAAAAAAAACATAACCAAAACCCGAATTGGAATGTTAGTTCAAGGGAAATTGCGAAGAAGAAAACTTTTACTTTTCACGAAATATACGCAAGTCAACACACTTCTATATATAGCAGATATATATATGTATCCTTATATATTAAAGCGAAATAAAAC 86 18146835 0.972309948 27 79 454 0.93814433 1.356981401 0.092783505 0.127906977 0.226804124 86 3 3 91 2R:18146675-18146952 7 pAbp FBtr0086740 18145219 18147191 CAAGGGA 7mer-A1 dme-miR-988-3p 2R + 18146661 18146858 3'utr pAbp FlyBase G13033.1 AAATCGAAAACTAAAAACAAATAAAAACCCAAGGAAAAATCATTGAAAAAATTGCAAAACACAAAACCACATGTATGCAGAAAATGCAAAATTATTTAAAAAAAACAAACAAACAAAATAATGAGAGTAAAACAGAAAAAAAAAACATAACCAAAACCCGAATTGGAATGTTAGTTCAAGGGAAATTGCGAAGAAGAA 40 18146834 0.952382821 16 37 162 0.940298507 1.498310554 0.23880597 0.5 0.701492537 40 3 1 63 2R:18146661-18146858 7 21 1577 FBgn0265297 43597.22333 1372.25 2113.58 0.000481682 0.015303334 0.009935749 2 3 2.5 0.01 dme-miR-999-3p 6mer2-7 GTTAAC 2R 18147354 18147359 - 2R_18147354_18147359_- 1 1 1 0 CG17680 FBtr0086781 18147295 18147588 2R - 18147279 18147440 3'utr CG17680 FlyBase G24602.1 AAGAATCCGCGCAGCTCTTGCATTTTTTGTGTATTGTCGTGTATTCTTCAAGTCCCGCTTTGATATTTTCGCTTTCTGAATGTTAACTATGCTCGTTAAATACTTGAATGTACTAGAATTAAATAAAGTTTATTCGACTATGCTTAAAACCTGTCTGTTATT 49 18147351 0.987563768 18 46 411 0.950819672 1.286306739 0.31147541 0.183673469 0.344262295 49 1 2 58 2R:18147279-18147440 6 CG17680 FBtr0086781 18147295 18147588 GTTAAC 6mer2-7 dme-miR-999-3p 2R - 18147316 18147438 3'utr CG17680 FlyBase G18613.1 GAATCCGCGCAGCTCTTGCATTTTTTGTGTATTGTCGTGTATTCTTCAAGTCCCGCTTTGATATTTTCGCTTTCTGAATGTTAACTATGCTCGTTAAATACTTGAATGTACTAGAATTAAATA 25 18147360 0.988304384 10 24 221 0.967741935 1.176091259 0.548387097 0.2 0.35483871 25 0 1 30 2R:18147316-18147438 6 14 1578 FBgn0062440 137 25.31333333 38.62666667 0.102189781 0.553068212 0.362443907 -8 1 -3.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 2R 18147544 18147549 - 2R_18147544_18147549_- 1 1 1 0 CG17680 FBtr0086781 18147295 18147588 2R - 18147527 18147597 stop_codon CG17680 FlyBase G24604.1 GAGGATTAAGCATCCGGACACTTGACAATCTCCATGTGGGAGTGCCTCCTAGTCGGGATAAATGTGTTGGC 26 18147553 0.934363125 6 22 138 0.821428571 1.06069784 0.464285714 0.076923077 0.142857143 26 4 1 23 2R:18147527-18147597 6 CG17680 FBtr0086781 18147295 18147588 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 2R - 18147527 18147571 3'utr CG17680 FlyBase G18615.1 AATCTCCATGTGGGAGTGCCTCCTAGTCGGGATAAATGTGTTGGC 18 18147552 0.730883113 6 17 102 0.96969697 1.505149978 0.515151515 0.611111111 0.787878788 18 1 0 32 2R:18147527-18147571 6 17.5 1579 FBgn0062440 137 25.31333333 38.62666667 0.127737226 0.691335265 0.453054884 4 3 3.5 0.01 dme-miR-308-3p 8mer-m1 CTGTGATT 2R 18148475 18148482 - 2R_18148475_18148482_- 0.385510858 0.385528993 0.385519925 1.28E-05 CG5742 FBtr0329999|FBtr0086780|FBtr0330000 18148094|18148462|18148462 18149675|18149675|18149549 2R - 18148463 18148505 3'utr CG5742 FlyBase G24606.1 TAGTTTCGGTTCGCATTGCTTTGCTGTGATTTTGCCCTCTTTA 33 18148484 0.729570457 4 32 380 0.973684211 1.568201724 0.263157895 0.151515152 0.263157895 33 1 0 37 2R:18148463-18148505 8 CG5742 FBtr0330000|FBtr0329999|FBtr0086780 18148462|18148094|18148462 18149549|18149675|18149675 CTGTGATT 8mer-m1 dme-miR-308-3p 2R - 18148465 18148504 3'utr CG5742 FlyBase G18616.1 AGTTTCGGTTCGCATTGCTTTGCTGTGATTTTGCCCTCTT 27 18148484 0.681693238 5 26 322 0.976744186 1.322219295 0.162790698 0.481481481 0.674418605 27 0 1 42 2R:18148465-18148504 8 30 1580 FBgn0034304 304 12.44333333 19.22666667 0.098684211 2.410929547 1.560332871 2 2 2 0.01 dme-miR-1003-3p 7mer-m8 ATGTGAG 2R 18154173 18154179 - 2R_18154173_18154179_- 0.671796207 0.671796207 0.671796207 0 lolal FBtr0086777 18154093 18155147 2R - 18154141 18154197 3'utr lolal FlyBase G24616.1 ATGTATGTATATGTATACATGTGAGCATAGATTTAAAGAAACTACGGTAAATAAACA 27 18154170 0.988774769 7 22 204 0.766666667 1.06069784 0.133333333 0.074074074 0.166666667 27 6 1 23 2R:18154141-18154197 7 lolal FBtr0086777 18154093 18155147 ATGTGAG 7mer-m8 dme-miR-1003-3p 2R - 18154134 18154197 3'utr lolal FlyBase G18621.1 ATGTATGTATATGTATACATGTGAGCATAGATTTAAAGAAACTACGGTAAATAAACAGAATAAT 21 18154182 0.987268663 8 17 145 0.810810811 1.477121255 0.162162162 0.476190476 0.702702703 21 7 0 30 2R:18154134-18154197 7 23.5 1581 FBgn0022238 614.5133333 54.55666667 83.64333333 0.038241644 0.430744791 0.280954848 -9 3 -3 0.01 dme-miR-283-5p 6mer2-7 GATATT 2R 18163556 18163561 + 2R_18163556_18163561_+ 1 1 1 0 CG10915 FBtr0345416|FBtr0086746 18163524|18163524 18164746|18164209 2R + 18163498 18163594 stop_codon CG10915 FlyBase G17120.1 GGCCGCGGGCACGGCGAAGCAGAATTAGACACCTACACTCAGACTTACATTAATAACCGATATTGGGCGTAGCGATAAGCGAAATACTCAAGCGGCG 13 18163559 0.96539504 8 11 54 0.8125 0.636822098 0.3125 0.230769231 0.375 13 1 2 13 2R:18163498-18163594 6 CG10915 FBtr0086746|FBtr0345416 18163524|18163524 18164209|18164746 GATATT 6mer2-7 dme-miR-283-5p 2R + 18163496 18163559 stop_codon CG10915 FlyBase G13042.1 ACGGCCGCGGGCACGGCGAAGCAGAATTAGACACCTACACTCAGACTTACATTAATAACCGATA 7 18163537 0.960910555 5 6 28 1 1 0.1 0.285714286 0.5 7 0 0 10 2R:18163496-18163559 4 4 1582 FBgn0034308 795.0233333 28.65333333 43.94333333 0.005031299 0.139599814 0.091026322 -3 19 8 0.01 dme-miR-305-5p 6mer2-7 GTACAA 2R 18164138 18164143 + 2R_18164138_18164143_+ 1 0.995126558 0.997563279 0.003446014 CG10915 FBtr0345416|FBtr0086746 18163524|18163524 18164746|18164209 2R + 18164083 18164191 3'utr CG10915 FlyBase G17122.1 AAGCCAAGAGACAAGCGACTTTAAATGTAATTCCGTACGTAGTAACCGAACATTTGTACAAGGCCGTGCGATTCTCATAACAAGTAACAGCCACAATATATGATAATTA 93 18164136 0.955038233 13 88 400 0.957264957 1.572096768 0.299145299 0.225806452 0.384615385 93 3 2 112 2R:18164083-18164191 6 CG10915 FBtr0086746|FBtr0345416 18163524|18163524 18164209|18164746 GTACAA 6mer2-7 dme-miR-305-5p 2R + 18164083 18164175 3'utr CG10915 FlyBase G13044.1 AAGCCAAGAGACAAGCGACTTTAAATGTAATTCCGTACGTAGTAACCGAACATTTGTACAAGGCCGTGCGATTCTCATAACAAGTAACAGCCA 81 18164136 0.955813876 12 79 367 0.982142857 2.041392685 0.303571429 0.283950617 0.482142857 81 2 0 110 2R:18164083-18164175 6 58 1583 FBgn0034308 795.0233333 28.65333333 43.94333333 0.072953834 2.024197301 1.319881666 2 2 2 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 2R 18164336 18164341 + 2R_18164336_18164341_+ 0.999719634 0.999986033 0.999852833 0.000188373 CG10915 FBtr0345416 18163524 18164746 2R + 18164292 18164421 3'utr CG10915 FlyBase G17123.2 ATAGTTCTTAGGTGCGTCGCATACGTGTGTAATCAACTTCCTCCATGTGCAGCTAACATACTGAATTATTTCGTAGTGTTTGATTTATATATTAAGTTCTAAGTTCGGCCTAAGCACCTTTGTTTGCCCG 136 18164337 0.981511724 18 129 890 0.958333333 1.90579588 0.035714286 0.183823529 0.339285714 136 6 1 161 2R:18164292-18164421 6 CG10915 FBtr0345416 18163524 18164746 ATGTGC 6mer3-8 dme-miR-305-3p 2R + 18164289 18164389 3'utr CG10915 FlyBase G13045.2 TTAATAGTTCTTAGGTGCGTCGCATACGTGTGTAATCAACTTCCTCCATGTGCAGCTAACATACTGAATTATTTCGTAGTGTTTGATTTATATATTAAGTT 81 18164337 0.796114938 13 79 504 1 2.096910013 0.04 0.419753086 0.624 81 0 0 125 2R:18164289-18164389 6 91.5 1584 FBgn0034308 795.0233333 28.65333333 43.94333333 0.115090962 3.193345742 2.082227111 -1 -1 -1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 18164534 18164539 + 2R_18164534_18164539_+ 1 1 1 0 CG10915 FBtr0345416|FBtr0345416|FBtr0345416 18163524|18163524|18163524 18164746|18164746|18164746 2R + 18164518 18164626 3'utr CG10915 FlyBase G17124.1 ATTTTACAAATGCGTACTGTGAACATCCCTCCAGCCCCCCAGCAGCTTGGATTACCTTTTTAGTCAAAGGGCAGCAGCCAGTCAAGTAGTGTTGTTGGTACAATAAATA 48 18164543 0.764014351 14 43 293 0.877192982 1.096910013 0.333333333 0.125 0.263157895 48 4 3 50 2R:18164518-18164626 6 CG10915 FBtr0345416|FBtr0345416|FBtr0345416 18163524|18163524|18163524 18164746|18164746|18164746 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 18164518 18164619 3'utr CG10915 FlyBase G13047.1 ATTTTACAAATGCGTACTGTGAACATCCCTCCAGCCCCCCAGCAGCTTGGATTACCTTTTTAGTCAAAGGGCAGCAGCCAGTCAAGTAGTGTTGTTGGTACA 29 18164536 0.686504114 12 26 154 0.87755102 1.633468456 0.204081633 0.413793103 0.653061224 29 6 0 43 2R:18164518-18164619 6 7.5 1585 FBgn0034308 795.0233333 28.65333333 43.94333333 0.009433685 0.261749651 0.170674353 -9 -2 -5.5 0.01 dme-miR-980-3p 6mer2-7 GCAGCT 2R 18164559 18164564 + 2R_18164559_18164564_+ 1 0.999999995 0.999999997 0 CG10915 FBtr0345416 18163524 18164746 2R + 18164518 18164626 3'utr CG10915 FlyBase G17124.1 ATTTTACAAATGCGTACTGTGAACATCCCTCCAGCCCCCCAGCAGCTTGGATTACCTTTTTAGTCAAAGGGCAGCAGCCAGTCAAGTAGTGTTGTTGGTACAATAAATA 48 18164543 0.764014351 14 43 293 0.877192982 1.096910013 0.333333333 0.125 0.263157895 48 4 3 50 2R:18164518-18164626 6 CG10915 FBtr0345416 18163524 18164746 GCAGCT 6mer2-7 dme-miR-980-3p 2R + 18164518 18164619 3'utr CG10915 FlyBase G13047.1 ATTTTACAAATGCGTACTGTGAACATCCCTCCAGCCCCCCAGCAGCTTGGATTACCTTTTTAGTCAAAGGGCAGCAGCCAGTCAAGTAGTGTTGTTGGTACA 29 18164575 0.686504114 12 26 154 0.87755102 1.633468456 0.204081633 0.413793103 0.653061224 29 6 0 43 2R:18164518-18164619 6 9.5 1586 FBgn0034308 795.0233333 28.65333333 43.94333333 0.011949335 0.331549558 0.216187514 16 -16 0 0.01 dme-miR-33-5p 8mer-A1 CAATGCAA 2R 18164679 18164686 + 2R_18164679_18164686_+ 0.634552243 0.634552243 0.634552243 0 CG10915 FBtr0345416 18163524 18164746 2R + 18164643 18164698 3'utr CG10915 FlyBase G17125.1 AAGATATAAACAAAATGCGTATGAATAACAAGTTAGCAATGCAAGCGCGATCTATA 12 18164675 0.967743315 6 11 53 0.933333333 1.146128036 0.466666667 0.166666667 0.333333333 12 1 0 14 2R:18164643-18164698 8 CG10915 FBtr0345416 18163524 18164746 CAATGCAA 8mer-A1 dme-miR-33-5p 2R + 18164650 18164696 3'utr CG10915 FlyBase G13048.1 AAACAAAATGCGTATGAATAACAAGTTAGCAATGCAAGCGCGATCTA 6 18164675 0.952376707 2 4 25 1 0.77815125 0.166666667 0 0 6 0 0 6 2R:18164650-18164696 8 8 1587 FBgn0034308 795.0233333 28.65333333 43.94333333 0.010062598 0.279199628 0.182052644 4 4 4 0.01 dme-miR-1006-3p 7mer-A1 GAATTTA 2R 18168936 18168942 - 2R_18168936_18168942_- 0.823349562 0.823349562 0.823349562 0 Dgp-1 FBtr0086773|FBtr0086774 18168741|18168411 18169024|18169024 2R - 18168901 18168960 3'utr Dgp-1 FlyBase G24639.1 TCTTAAAGATAATTGGATGAATTTATTTTGCGACCTTCTAATCTAAAGTGGCATGTGCCC 8 18168925 0.980034818 6 8 67 1 0.954242509 0.111111111 0.125 0.222222222 8 0 0 9 2R:18168901-18168960 7 Dgp-1 FBtr0086774|FBtr0086773 18168411|18168741 18169024|18169024 GAATTTA 7mer-A1 dme-miR-1006-3p 2R - 18168838 18168943 3'utr Dgp-1 FlyBase G18636.1 TGAATTTATTTTGCGACCTTCTAATCTAAAGTGGCATGTGCCCCAATAAACTATTTCGTGTCCCGTTCTTGTCCACTGTACATTGTGCTATATGCCAAACCAAATT 15 18168923 0.989099383 9 13 122 0.952380952 1.301029996 0 0.2 0.428571429 15 1 0 20 2R:18168838-18168943 7 5 1588 FBgn0027836 713.1466667 32.87333333 49.73 0.00701118 0.152098966 0.100542932 -17 -19 -18 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2R 18168991 18168996 - 2R_18168991_18168996_- 1 1 1 0 Dgp-1 FBtr0086773|FBtr0086774 18168741|18168411 18169024|18169024 2R - 18168966 18169077 stop_codon Dgp-1 FlyBase G24640.1 ATCCTTCGTCGTCGTCCTCGGTTGAAGTCACACCGGCCGCTCTCACCGAGTGAAGTGCGCCGCCTGCATGTTTTGGCTCTTTCTAGTTTTGTAAACTAAAGTATTTTTTTTT 29 18168997 0.900177205 17 27 278 0.911764706 1.491361694 0.147058824 0.103448276 0.235294118 29 3 0 31 2R:18168966-18169077 6 Dgp-1 FBtr0086774|FBtr0086773 18168411|18168741 18169024|18169024 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2R - 18168973 18169107 stop_codon Dgp-1 FlyBase G18637.1 CGGCCTCTTTGGGTCTGCCCCTCGGCGAGAATCCTTCGTCGTCGTCCTCGGTTGAAGTCACACCGGCCGCTCTCACCGAGTGAAGTGCGCCGCCTGCATGTTTTGGCTCTTTCTAGTTTTGTAAACTAAAGTATT 32 18168997 0.949764327 12 32 262 1 1.707570176 0.117647059 0.5 0.68627451 32 0 0 51 2R:18168973-18169107 6 15.5 1589 FBgn0027836 713.1466667 32.87333333 49.73 0.02173466 0.471506794 0.311683089 1 1 1 0.01 dme-miR-1003-3p 6mer2-7 TGTGAG 2R 18175472 18175477 - 2R_18175472_18175477_- 1 1 1 0 CG5726 FBtr0086772 18175253 18176079 2R - 18175426 18175498 3'utr CG5726 FlyBase G24656.1 ACGTATTTTTAAAGCAAATTTTGTGAGGCCCTCTGTTGGAACAACAAAGCCAAGCCGGAGTGCAGAGAAAAAC 66 18175478 0.973020183 7 62 449 0.931506849 1.355387658 0.054794521 0.106060606 0.191780822 66 3 2 68 2R:18175426-18175498 6 CG5726 FBtr0086772 18175253 18176079 TGTGAG 6mer2-7 dme-miR-1003-3p 2R - 18175454 18175498 3'utr CG5726 FlyBase G18656.1 ACGTATTTTTAAAGCAAATTTTGTGAGGCCCTCTGTTGGAACAAC 34 18175478 0.680497868 5 32 255 0.9375 1.352182518 0 0.323529412 0.520833333 34 2 1 45 2R:18175454-18175498 6 48 1590 FBgn0034313 580.9266667 20.17 30.98666667 0.082626608 2.379771939 1.549053356 1 1 1 0.01 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 18175678 18175685 - 2R_18175678_18175685_- 0.605654138 0.605654138 0.605654138 0 CG5726 FBtr0086772 18175253 18176079 2R - 18175666 18175697 3'utr CG5726 FlyBase G24658.1 GCTTAGAAACTAAGTACAAAGTCAATGAAAAA 5 18175672 0.866793604 4 5 18 1 0.903089987 0.375 0.6 0.75 5 0 0 8 2R:18175666-18175697 8 CG5726 FBtr0086772 18175253 18176079 AGTACAAA 8mer-A1 dme-miR-305-5p 2R - 18175658 18175701 3'utr CG5726 FlyBase G18657.1 AATTGCTTAGAAACTAAGTACAAAGTCAATGAAAAAACAAAAAT 6 18175696 0.977280583 4 5 25 0.857142857 0.77815125 0 0.166666667 0.285714286 6 1 0 6 2R:18175658-18175701 8 5 1591 FBgn0034313 580.9266667 20.17 30.98666667 0.008606938 0.24789291 0.161359725 -13 11 -1 0.01 dme-miR-14-3p 6mer2-7 AGACTG 2R 18175961 18175966 - 2R_18175961_18175966_- 1 1 1 0 CG5726 FBtr0086772 18175253 18176079 2R - 18175923 18176012 3'utr CG5726 FlyBase G24660.1 TGTTTCGCCTTCGTATATGTTTCCTAATGGATGTGTATATCCACGTAGACTGTTTTCACATTATTTTGTCTTCAACTGAGCTCAAATGTT 39 18175960 0.799523655 10 36 349 0.957446809 1.352182518 0.255319149 0.179487179 0.319148936 39 1 1 45 2R:18175923-18176012 6 CG5726 FBtr0086772 18175253 18176079 AGACTG 6mer2-7 dme-miR-14-3p 2R - 18175923 18175978 3'utr CG5726 FlyBase G18658.1 GTATATCCACGTAGACTGTTTTCACATTATTTTGTCTTCAACTGAGCTCAAATGTT 16 18175960 0.9852749 5 14 123 0.913043478 1.021189299 0.347826087 0.25 0.47826087 16 1 1 21 2R:18175923-18175978 6 16.5 1592 FBgn0034313 580.9266667 20.17 30.98666667 0.028402897 0.818046604 0.532487091 -6 -6 -6 0.01 dme-miR-1007-3p 7mer-m8 TGAGCTT 2R 18275681 18275687 - 2R_18275681_18275687_- 0.620203442 0.620203442 0.620203442 0 Ote FBtr0086768 18275605 18275804 2R - 18275637 18275700 3'utr Ote FlyBase G24678.1 TTTTGATGTAACTTGAGCTTGAGTTTGACTAGCATTTAAGCTGCGTGTTATCCGTGTTCAAATA 28 18275687 0.807666015 6 27 226 1 1.568201724 0.594594595 0.25 0.432432432 28 0 0 37 2R:18275637-18275700 7 Ote FBtr0086768 18275605 18275804 TGAGCTT 7mer-m8 dme-miR-1007-3p 2R - 18275638 18275714 3'utr Ote FlyBase G18673.1 TTGTATGAATCTTGTTTTGATGTAACTTGAGCTTGAGTTTGACTAGCATTTAAGCTGCGTGTTATCCGTGTTCAAAT 18 18275687 0.986411498 5 18 156 1 1.431363764 0.481481481 0.388888889 0.592592593 18 0 0 27 2R:18275638-18275714 7 18 1593 FBgn0266420 914.6666667 70.74 107.93 0.0196793 0.254452926 0.166774761 0 0 0 0.01 dme-miR-33-5p 7mer-A1 AATGCAA 2R 18278585 18278591 - 2R_18278585_18278591_- 0.782911821 0.763468016 0.773189918 0.013748843 sbb FBtr0301550 18278196 18280102 2R - 18278576 18278609 3'utr sbb FlyBase G24684.1 AGGTTTTTTGACATTCTTAATGCAATTTGTAATC 14 18278593 0.757025235 3 14 139 1 1.204119983 0 0.142857143 0.25 14 0 0 16 2R:18278576-18278609 7 sbb FBtr0301550 18278196 18280102 AATGCAA 7mer-A1 dme-miR-33-5p 2R - 18278576 18278619 3'utr sbb FlyBase G18674.1 AGGAGTCGCTAGGTTTTTTGACATTCTTAATGCAATTTGTAATC 13 18278593 0.987181019 5 12 115 1 1.342422681 0.090909091 0.538461538 0.727272727 13 0 0 22 2R:18278576-18278619 7 13 1594 FBgn0010575 986.7266667 17.07666667 26.24333333 0.013174875 0.761272692 0.495363902 2 2 2 0.01 dme-miR-968-5p 6mer3-8 ACTACT 2R 18279254 18279259 - 2R_18279254_18279259_- 1 1 1 0 sbb FBtr0301550|FBtr0329997|FBtr0301551|FBtr0301547 18278196|18279063|18279063|18278978 18280102|18280048|18280102|18280102 2R - 18279226 18279288 3'utr sbb FlyBase G24687.1 TGTGTATCTAAATCTATATCTGTGTGTGTACTACTCGTATCCGTAGTTTCTACTTTATAAGTT 75 18279262 0.916808826 6 71 772 0.942528736 1.612783857 0.114942529 0.12 0.24137931 75 4 1 82 2R:18279226-18279288 6 sbb FBtr0301551|FBtr0301547|FBtr0301550|FBtr0329997 18279063|18278978|18278196|18279063 18280102|18280102|18280102|18280048 ACTACT 6mer3-8 dme-miR-968-5p 2R - 18279224 18279287 3'utr sbb FlyBase G18677.1 GTGTATCTAAATCTATATCTGTGTGTGTACTACTCGTATCCGTAGTTTCTACTTTATAAGTTCT 47 18279262 0.987684976 6 46 452 0.96875 1.792391689 0.09375 0.255319149 0.453125 47 2 0 62 2R:18279224-18279287 6 57.5 1595 FBgn0010575 986.7266667 17.07666667 26.24333333 0.058273483 3.367167675 2.191032643 3 3 3 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 2R 18279374 18279379 - 2R_18279374_18279379_- 1 1 1 0 sbb FBtr0301550|FBtr0329997|FBtr0301551|FBtr0301547 18278196|18279063|18279063|18278978 18280102|18280048|18280102|18280102 2R - 18279350 18279458 3'utr sbb FlyBase G24688.2 ATTGTTTAACTAAATGATTAAATTATGCAAGTAGAACGTACAAGATTAGCATTTAGCGTGTGTATTAATTATCCTTATCTGTGTTGCGGATGGAGCTGCGCGGGATTTG 233 18279381 0.984492968 21 165 1912 0.701886792 1.667452953 0.230188679 0.124463519 0.230188679 233 76 3 186 2R:18279350-18279458 6 sbb FBtr0301551|FBtr0301547|FBtr0301550|FBtr0329997 18279063|18278978|18278196|18279063 18280102|18280102|18280102|18280048 TGTGTT 6mer3-8 dme-miR-317-3p 2R - 18279301 18279393 3'utr sbb FlyBase G18678.1 TAATTATCCTTATCTGTGTTGCGGATGGAGCTGCGCGGGATTTGCATCTAAAAGACAAATTGGGCGCGCCGCCCATTCAATTCTTATAAATAT 220 18279381 0.885389879 16 135 1533 0.630813953 1.222516382 0.296511628 0.404545455 0.619186047 220 115 12 217 2R:18279301-18279393 6 211.5 1596 FBgn0010575 986.7266667 17.07666667 26.24333333 0.214345074 12.3853211 8.059189635 2 2 2 0.01 dme-miR-282-5p 6mer3-8 AGAGGC 2R 18279633 18279638 - 2R_18279633_18279638_- 1 1 1 0 sbb FBtr0301550|FBtr0329997|FBtr0301551|FBtr0301547 18278196|18279063|18279063|18278978 18280102|18280048|18280102|18280102 2R - 18279607 18279706 3'utr sbb FlyBase G24689.1 AGCGACTTTTTCCTAAGTGTATTTGCATCTGCATATAGATATCTATATTTATATTTATATCATACGAGAGAGGCGTAATCCGAACATGAACAAACACAAC 33 18279628 0.941496006 7 29 127 0.894736842 1.230448921 0.052631579 0.121212121 0.236842105 33 3 1 34 2R:18279607-18279706 6 sbb FBtr0301551|FBtr0301547|FBtr0301550|FBtr0329997 18279063|18278978|18278196|18279063 18280102|18280102|18280102|18280048 AGAGGC 6mer3-8 dme-miR-282-5p 2R - 18279580 18279650 3'utr sbb FlyBase G18680.1 ATATCATACGAGAGAGGCGTAATCCGAACATGAACAAACACAACCAACAAACAGATTACATGAAACATGCA 15 18279620 0.882041956 3 13 38 0.904761905 1.278753601 0.095238095 0.266666667 0.476190476 15 2 0 19 2R:18279580-18279650 6 19 1597 FBgn0010575 986.7266667 17.07666667 26.24333333 0.019255586 1.112629319 0.723993395 -10 -18 -14 0.01 dme-miR-8-3p 6mer2-7 AGTATT 2R 18279813 18279818 - 2R_18279813_18279818_- 1 1 1 0 sbb FBtr0301550|FBtr0329997|FBtr0301551|FBtr0301547 18278196|18279063|18279063|18278978 18280102|18280048|18280102|18280102 2R - 18279810 18280075 stop_codon sbb FlyBase G24691.1 AAGGCGTATAACGTAAAGAACAACTAGTGTGGAGCGGAAAGTCATGGTGCCCGCCCCATAGTGCATTTGCTATTTTCTGAGATCCCCAGACAGACAGATAGAATGGGAGAAGGATAAGGCTTTGTTCCCCGTTGGATTCCAACTTCTTCCCGTCGAAACCTGTCACAGTCTTGGCTGCCTCAACGAGTCCTTTCGATGCTGATGCATCGGCGGTCGAGGAACCGAGAGGAACACAGAATCGACTATTTATATGCATAAGTATTTTT 108 18279829 0.976214703 27 104 673 0.96875 1.792391689 0.1484375 0.12037037 0.2578125 108 3 1 124 2R:18279810-18280075 6 sbb FBtr0301551|FBtr0301547|FBtr0301550|FBtr0329997 18279063|18278978|18278196|18279063 18280102|18280102|18280102|18280048 AGTATT 6mer2-7 dme-miR-8-3p 2R - 18279762 18279885 3'utr sbb FlyBase G18681.1 TTTCGATGCTGATGCATCGGCGGTCGAGGAACCGAGAGGAACACAGAATCGACTATTTATATGCATAAGTATTTTTTGATGTTTCGTTCGATGTGGTTAACTATAACTAGCCTAAGGTATCACT 56 18279830 0.915556926 11 51 417 0.864197531 1.544068044 0.209876543 0.303571429 0.518518519 56 10 1 70 2R:18279762-18279885 6 22.5 1598 FBgn0010575 986.7266667 17.07666667 26.24333333 0.022802667 1.317587351 0.8573606 11 12 11.5 0.01 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 18409811 18409817 - 2R_18409811_18409817_- 0.823349562 0.823349562 0.823349562 0 imd FBtr0086725|FBtr0345891 18409794|18409794 18410171|18410171 2R - 18409801 18409830 3'utr imd FlyBase G24719.1 TTATACAAATAGAAGCTTTATTGTTACGTA 5 18409821 0.854286714 2 5 41 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2R:18409801-18409830 7 imd FBtr0086725|FBtr0345891 18409794|18409794 18410171|18410171 AGCTTTA 7mer-A1 dme-miR-79-3p 2R - 18409804 18409861 3'utr imd FlyBase G18701.1 GAGCTGGTATTTAAAAGCATTTTTGTAAAGTTTATACAAATAGAAGCTTTATTGTTAC 9 18409813 0.98230543 6 8 67 1 1.176091259 0.6 0.333333333 0.6 9 0 0 15 2R:18409804-18409861 7 6 1599 FBgn0013983 396 36.13 55.28 0.015151515 0.16606698 0.10853835 4 -4 0 0.01 dme-miR-277-3p 6mer3-8 TGCATT 2R 18409929 18409934 - 2R_18409929_18409934_- 1 1 1 0 imd FBtr0086725|FBtr0345891 18409794|18409794 18410171|18410171 2R - 18409884 18409994 3'utr imd FlyBase G24720.1 ACGGGATATATGTGCAATATTTGATTTATAAATCCAACCTATCGAATAAGTGCGTAGAATTGCATTAACTGTTATTACTGCAGTTTAATCTTTAAGTTGTGATACTTGTGT 27 18409930 0.772176735 13 24 239 0.914285714 1.505149978 0.457142857 0.148148148 0.342857143 27 3 0 32 2R:18409884-18409994 6 imd FBtr0086725|FBtr0345891 18409794|18409794 18410171|18410171 TGCATT 6mer3-8 dme-miR-277-3p 2R - 18409885 18409993 3'utr imd FlyBase G18702.1 CGGGATATATGTGCAATATTTGATTTATAAATCCAACCTATCGAATAAGTGCGTAGAATTGCATTAACTGTTATTACTGCAGTTTAATCTTTAAGTTGTGATACTTGTG 33 18409931 0.793735591 12 26 274 0.790697674 0.929418926 0.23255814 0.272727273 0.441860465 33 6 3 34 2R:18409885-18409993 6 10 1600 FBgn0013983 396 36.13 55.28 0.025252525 0.276778301 0.18089725 -4 -3 -3.5 0.01 dme-miR-92b-3p 8mer-A1 GTGCAATA 2R 18409976 18409983 - 2R_18409976_18409983_- 0.628914005 0.62808917 0.628501588 0.000583222 imd FBtr0086725|FBtr0345891 18409794|18409794 18410171|18410171 2R - 18409884 18409994 3'utr imd FlyBase G24720.1 ACGGGATATATGTGCAATATTTGATTTATAAATCCAACCTATCGAATAAGTGCGTAGAATTGCATTAACTGTTATTACTGCAGTTTAATCTTTAAGTTGTGATACTTGTGT 27 18409984 0.772176735 13 24 239 0.914285714 1.505149978 0.457142857 0.148148148 0.342857143 27 3 0 32 2R:18409884-18409994 8 imd FBtr0086725|FBtr0345891 18409794|18409794 18410171|18410171 GTGCAATA 8mer-A1 dme-miR-92b-3p 2R - 18409885 18409993 3'utr imd FlyBase G18702.1 CGGGATATATGTGCAATATTTGATTTATAAATCCAACCTATCGAATAAGTGCGTAGAATTGCATTAACTGTTATTACTGCAGTTTAATCTTTAAGTTGTGATACTTGTG 33 18409984 0.793735591 12 26 274 0.790697674 0.929418926 0.23255814 0.272727273 0.441860465 33 6 3 34 2R:18409885-18409993 8 9 1601 FBgn0013983 396 36.13 55.28 0.022727273 0.249100471 0.162807525 1 1 1 0.01 dme-miR-12-5p 6mer3-8 AATACT 2R 18419466 18419471 + 2R_18419466_18419471_+ 1 1 1 0 Dp1 FBtr0345226|FBtr0086682|FBtr0086679|FBtr0086680|FBtr0086681|FBtr0086683|FBtr0340329 18419424|18419424|18419424|18419424|18419424|18419424|18419424 18420742|18420742|18420742|18420742|18420742|18421124|18420742 2R + 18419403 18419509 stop_codon Dp1 FlyBase G17182.1 CCGTGTGGGGCCCCAAAAACTAAGTGCATCGGGCCGAGTGTCCCGATCGCCAGCAGTAGCAGCAATACTACAAGTCGGGGTGCGCCGGGGATCGGAGCTGGAGATGG 18 18419459 0.925145507 8 17 57 0.954545455 1.021189299 0.545454545 0.111111111 0.272727273 18 0 1 21 2R:18419403-18419509 6 Dp1 FBtr0086683|FBtr0340329|FBtr0086680|FBtr0086681|FBtr0086682|FBtr0086679|FBtr0345226 18419424|18419424|18419424|18419424|18419424|18419424|18419424 18421124|18420742|18420742|18420742|18420742|18420742|18420742 AATACT 6mer3-8 dme-miR-12-5p 2R + 18419457 18419561 3'utr Dp1 FlyBase G13100.1 AGTAGCAGCAATACTACAAGTCGGGGTGCGCCGGGGATCGGAGCTGGAGATGGACCAGGAGCTGGAGCAGAAGCTGGAACTGGAACTTGAATTGGATTATCGGGC 10 18419495 0.938497857 8 9 37 0.941176471 1.204119983 0.176470588 0.4 0.647058824 10 1 0 16 2R:18419457-18419561 6 4 1602 FBgn0027835 9328.583333 204.7766667 314.1966667 0.00042879 0.019533475 0.01273088 7 -29 -11 0.01 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 18419784 18419791 + 2R_18419784_18419791_+ 0.625364269 0.625364269 0.625364269 0 Dp1 FBtr0345226|FBtr0086682|FBtr0086679|FBtr0086680|FBtr0086681|FBtr0086683|FBtr0340329 18419424|18419424|18419424|18419424|18419424|18419424|18419424 18420742|18420742|18420742|18420742|18420742|18421124|18420742 2R + 18419761 18419817 3'utr Dp1 FlyBase G17185.1 ACACATGCTCACACATATGAAATTGCATTTATACAACATATAGAATACGAGAATCGA 84 18419783 0.807586703 7 77 648 0.914893617 1.33243846 0.031914894 0.107142857 0.20212766 84 5 3 86 2R:18419761-18419817 8 Dp1 FBtr0086683|FBtr0340329|FBtr0086680|FBtr0086681|FBtr0086682|FBtr0086679|FBtr0345226 18419424|18419424|18419424|18419424|18419424|18419424|18419424 18421124|18420742|18420742|18420742|18420742|18420742|18420742 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 18419762 18419805 3'utr Dp1 FlyBase G13102.1 CACATGCTCACACATATGAAATTGCATTTATACAACATATAGAA 41 18419783 0.964412269 4 39 282 0.938461538 1.785329835 0.123076923 0.390243902 0.615384615 41 4 0 61 2R:18419762-18419805 8 60.5 1603 FBgn0027835 9328.583333 204.7766667 314.1966667 0.006485443 0.295443817 0.192554557 1 1 1 0.01 dme-miR-1012-3p 6mer2-7 TGACTA 2R 18420019 18420024 + 2R_18420019_18420024_+ 1 1 1 0 Dp1 FBtr0345226|FBtr0086682|FBtr0086679|FBtr0086680|FBtr0086681|FBtr0086683|FBtr0340329 18419424|18419424|18419424|18419424|18419424|18419424|18419424 18420742|18420742|18420742|18420742|18420742|18421124|18420742 2R + 18419965 18420037 3'utr Dp1 FlyBase G17186.1 TCCCTAAAAGTAAGCAGAAAGTTCAGCAAAATGGTTTGTTAATTGAATTAAAACTGACTAGCGAAGCACGTTC 14 18420011 0.970726222 6 11 63 0.8125 1.113943352 0.5 0.142857143 0.25 14 3 0 13 2R:18419965-18420037 6 Dp1 FBtr0086683|FBtr0340329|FBtr0086680|FBtr0086681|FBtr0086682|FBtr0086679|FBtr0345226 18419424|18419424|18419424|18419424|18419424|18419424|18419424 18421124|18420742|18420742|18420742|18420742|18420742|18420742 TGACTA 6mer2-7 dme-miR-1012-3p 2R + 18419977 18420060 3'utr Dp1 FlyBase G13104.1 AGCAGAAAGTTCAGCAAAATGGTTTGTTAATTGAATTAAAACTGACTAGCGAAGCACGTTCAAGAACGAATGTAATTTTAAGCA 21 18420012 0.841890371 8 15 119 0.807692308 1.021189299 0.269230769 0.19047619 0.346153846 21 4 1 21 2R:18419977-18420060 6 10.5 1604 FBgn0027835 9328.583333 204.7766667 314.1966667 0.001125573 0.051275373 0.03341856 8 7 7.5 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA 2R 18420166 18420171 + 2R_18420166_18420171_+ 1 1 1 0 Dp1 FBtr0345226|FBtr0086682|FBtr0086679|FBtr0086680|FBtr0086681|FBtr0086683|FBtr0340329 18419424|18419424|18419424|18419424|18419424|18419424|18419424 18420742|18420742|18420742|18420742|18420742|18421124|18420742 2R + 18420149 18420231 3'utr Dp1 FlyBase G17188.1 AACCCTTCCCAATTAAGTGATGATTATTATGATTTATGCGAAAGTAAATGTTAAATGAACGTTGATTGTATTGTACAAACGTT 14 18420162 0.985921137 9 14 119 1 1.176091259 0.133333333 0.071428571 0.133333333 14 0 0 15 2R:18420149-18420231 6 Dp1 FBtr0086683|FBtr0340329|FBtr0086680|FBtr0086681|FBtr0086682|FBtr0086679|FBtr0345226 18419424|18419424|18419424|18419424|18419424|18419424|18419424 18421124|18420742|18420742|18420742|18420742|18420742|18420742 TGATGA 6mer3-8 dme-miR-2a-2-5p 2R + 18420149 18420184 3'utr Dp1 FlyBase G13105.1 AACCCTTCCCAATTAAGTGATGATTATTATGATTTA 4 18420166 0.987765367 2 3 23 1 0.602059991 0 0.333333333 0.5 3 0 0 4 2R:18420149-18420184 6 5 1605 FBgn0027835 9328.583333 204.7766667 314.1966667 0.000535987 0.024416844 0.0159136 4 0 2 0.01 dme-miR-276a-3p 6mer3-8 AGTTCC 2R 18425970 18425975 + 2R_18425970_18425975_+ 1 1 1 0 CG5174 FBtr0306637|FBtr0340359|FBtr0086687|FBtr0086686|FBtr0306636|FBtr0301149|FBtr0086690 18425446|18425446|18425446|18425446|18425446|18425446|18425446 18426221|18426221|18426221|18426221|18426221|18426221|18426221 2R + 18425897 18426001 3'utr CG5174 FlyBase G17201.1 ATTAGAAAATCATGCATTGCGGTTAAAGTGAATATACATTTGTTTTACGCTTTTATTTCTTCTCTAGGCGTTGAGTTCCGTGGTTAGATGGCGTTCCCTAATCCG 15 18425977 0.803246165 9 14 126 1 1.278753601 0.263157895 0.133333333 0.315789474 15 0 0 19 2R:18425897-18426001 6 CG5174 FBtr0301149|FBtr0086690|FBtr0306636|FBtr0086686|FBtr0340359|FBtr0086687|FBtr0306637 18425446|18425446|18425446|18425446|18425446|18425446|18425446 18426221|18426221|18426221|18426221|18426221|18426221|18426221 AGTTCC 6mer3-8 dme-miR-276a-3p 2R + 18425934 18426043 3'utr CG5174 FlyBase G13119.1 ATTTGTTTTACGCTTTTATTTCTTCTCTAGGCGTTGAGTTCCGTGGTTAGATGGCGTTCCCTAATCCGTTGAAAAGCCAATTCCAAATTTATTTAGTACTAAATATTTGT 15 18425979 0.987409418 11 14 136 0.961538462 1.096910013 0.192307692 0.6 0.769230769 15 0 1 25 2R:18425934-18426043 6 5 1606 FBgn0034345 1826.563333 198.1366667 302.45 0.002737381 0.025235107 0.016531658 -7 -9 -8 0.01 dme-miR-282-5p 6mer3-8 AGAGGC 2R 18430576 18430581 - 2R_18430576_18430581_- 1 1 1 0 CG30118 FBtr0113361 18430313 18430829 2R - 18430575 18430641 3'utr CG30118 FlyBase G24725.1 ACACACCCTGTTACTTATTTGCGTACTTAACCGCAGGAGGATGAAGGAAGCGTAAACTCTAGAGGCG 6 18430600 0.99888356 4 6 26 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2R:18430575-18430641 6 CG30118 FBtr0113361 18430313 18430829 AGAGGC 6mer3-8 dme-miR-282-5p 2R - 18430571 18430624 3'utr CG30118 FlyBase G18706.1 TTTGCGTACTTAACCGCAGGAGGATGAAGGAAGCGTAAACTCTAGAGGCGTATG 6 18430600 0.999395918 3 5 25 0.888888889 0.903089987 0.222222222 0.333333333 0.555555556 6 1 0 8 2R:18430571-18430624 6 3 1607 FBgn0050118 452.95 21.67666667 33.06 0.006623248 0.138397663 0.090744102 19 19 19 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2R 18445384 18445389 + 2R_18445384_18445389_+ 1 1 1 0 slim FBtr0086693 18444783 18445526 2R + 18445374 18445422 3'utr slim FlyBase G17219.1 AATTAACAATAAGACTCCATCAATATTGCGATATCATGTACCATGCAGT 17 18445398 0.975381481 5 16 101 0.947368421 0.954242509 0.052631579 0.117647059 0.210526316 17 0 1 18 2R:18445374-18445422 6 slim FBtr0086693 18444783 18445526 AAGACT 6mer3-8 dme-miR-14-3p 2R + 18445374 18445424 3'utr slim FlyBase G13130.1 AATTAACAATAAGACTCCATCAATATTGCGATATCATGTACCATGCAGTAC 13 18445398 0.968417423 3 12 69 0.947368421 0.954242509 0.157894737 0.384615385 0.578947368 13 0 1 18 2R:18445374-18445424 6 10.5 1608 FBgn0261477 905.8466667 35.99333333 55.57333333 0.011591366 0.291720689 0.188939539 -14 -14 -14 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2R 18445480 18445485 + 2R_18445480_18445485_+ 1 1 1 0 slim FBtr0086693 18444783 18445526 2R + 18445461 18445497 3'utr slim FlyBase G17220.1 TGCTCGGTTTACATTACCCAAGACTAAATTTGGTTGA 9 18445475 0.728883053 4 8 61 0.888888889 0.903089987 0.333333333 0 0 9 1 0 8 2R:18445461-18445497 6 slim FBtr0086693 18444783 18445526 AAGACT 6mer3-8 dme-miR-14-3p 2R + 18445433 18445492 3'utr slim FlyBase G13131.1 CTGCTCGCCCCCGTGGCGAACGTTGGTTTGCTCGGTTTACATTACCCAAGACTAAATTTG 7 18445475 0.980120861 5 7 51 1 1.041392685 0.454545455 0.285714286 0.545454545 7 0 0 11 2R:18445433-18445492 6 6.5 1609 FBgn0261477 905.8466667 35.99333333 55.57333333 0.007175607 0.180588998 0.116962572 5 5 5 0.01 dme-miR-8-3p 7mer-A1 AGTATTA 2R 18554195 18554201 - 2R_18554195_18554201_- 0.823349488 0.823349562 0.823349525 7.07E-08 GEFmeso FBtr0310055|FBtr0340387|FBtr0300421 18554117|18554117|18554117 18556919|18554332|18554332 2R - 18554151 18554210 3'utr GEFmeso FlyBase G24746.1 ATCTTAGATAGTATTAGTCGACTGTTTTATATTTAGAGCTTAGTTGCATAACCGCAGAGT 7 18554186 0.992829544 5 7 83 1 0.84509804 0.142857143 0 0 7 0 0 7 2R:18554151-18554210 7 GEFmeso FBtr0300421|FBtr0340387|FBtr0310055 18554117|18554117|18554117 18554332|18554332|18556919 AGTATTA 7mer-A1 dme-miR-8-3p 2R - 18554173 18554212 3'utr GEFmeso FlyBase G18719.1 TAATCTTAGATAGTATTAGTCGACTGTTTTATATTTAGAG 7 18554199 0.897308631 5 7 72 1 1.041392685 0.181818182 0.571428571 0.727272727 7 0 0 11 2R:18554173-18554212 7 6 1610 FBgn0050115 776.3133333 15.20333333 23.32 0.007728838 0.394650296 0.25728988 -15 -2 -8.5 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 2R 18620532 18620537 - 2R_18620532_18620537_- 1 1 1 0 Atg7 FBtr0086712|FBtr0086711 18620464|18620464 18620720|18620720 2R - 18620503 18620636 3'utr Atg7 FlyBase G24755.1 AGCATTTATAGTTCAATGTCTATACCAAAAATGTGTGTACTTCAATGCTTTTATTCTATCTAGTCGTTAAGCAAATTGTGAATCATTCAAATGAAATTGATGTGAAAATTAGGCATAAGAAAAATGTGAATTTA 39 18620528 0.981159422 11 37 268 0.957446809 1.352182518 0.170212766 0.179487179 0.319148936 39 1 1 45 2R:18620503-18620636 6 Atg7 FBtr0086712|FBtr0086711 18620464|18620464 18620720|18620720 ATGTGA 6mer3-8 dme-miR-1003-3p 2R - 18620503 18620622 3'utr Atg7 FlyBase G18724.1 AATGTCTATACCAAAAATGTGTGTACTTCAATGCTTTTATTCTATCTAGTCGTTAAGCAAATTGTGAATCATTCAAATGAAATTGATGTGAAAATTAGGCATAAGAAAAATGTGAATTTA 26 18620561 0.985100189 12 24 192 0.976744186 1.62324929 0.255813953 0.423076923 0.651162791 26 1 0 42 2R:18620503-18620622 6 10 1611 FBgn0034366 131 6.586666667 10.04 0.076335878 1.518218623 0.996015936 -9 24 7.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 18620608 18620613 - 2R_18620608_18620613_- 1 1 1 0 Atg7 FBtr0086712|FBtr0086711 18620464|18620464 18620720|18620720 2R - 18620503 18620636 3'utr Atg7 FlyBase G24755.1 AGCATTTATAGTTCAATGTCTATACCAAAAATGTGTGTACTTCAATGCTTTTATTCTATCTAGTCGTTAAGCAAATTGTGAATCATTCAAATGAAATTGATGTGAAAATTAGGCATAAGAAAAATGTGAATTTA 39 18620601 0.981159422 11 37 268 0.957446809 1.352182518 0.170212766 0.179487179 0.319148936 39 1 1 45 2R:18620503-18620636 6 Atg7 FBtr0086712|FBtr0086711 18620464|18620464 18620720|18620720 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 18620503 18620622 3'utr Atg7 FlyBase G18724.1 AATGTCTATACCAAAAATGTGTGTACTTCAATGCTTTTATTCTATCTAGTCGTTAAGCAAATTGTGAATCATTCAAATGAAATTGATGTGAAAATTAGGCATAAGAAAAATGTGAATTTA 26 18620602 0.985100189 12 24 192 0.976744186 1.62324929 0.255813953 0.423076923 0.651162791 26 1 0 42 2R:18620503-18620622 6 9.5 1612 FBgn0034366 131 6.586666667 10.04 0.072519084 1.442307692 0.946215139 -12 -11 -11.5 0.01 dme-miR-305-5p 7mer-m8 AGTACAA 2R 18632444 18632450 - 2R_18632444_18632450_- 0.643267584 0.643267584 0.643267584 0 CG30122 FBtr0086660|FBtr0300924|FBtr0300923 18632326|18632326|18632326 18632821|18632821|18632821 2R - 18632433 18632482 3'utr CG30122 FlyBase G24772.1 GCGGTCTTTACTCTGGCACTACGTATCTAGGCAGTACAACTTGTTTTAAC 11 18632442 0.800389867 5 11 67 1 1.301029996 0.45 0.363636364 0.65 11 0 0 20 2R:18632433-18632482 7 CG30122 FBtr0300923|FBtr0300924|FBtr0086660 18632326|18632326|18632326 18632821|18632821|18632821 AGTACAA 7mer-m8 dme-miR-305-5p 2R - 18632425 18632516 3'utr CG30122 FlyBase G18735.1 TCTATATGACAGTGACGAAGCAATTGAATGAAACGCGGTCTTTACTCTGGCACTACGTATCTAGGCAGTACAACTTGTTTTAACGTTTATTA 10 18632442 0.978831488 5 10 67 1 1.146128036 0.214285714 0.3 0.5 10 0 0 14 2R:18632425-18632516 7 6.5 1613 FBgn0050122 2646.33 69.24 106.41 0.002456232 0.093876372 0.061084485 -8 -8 -8 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 2R 18632585 18632591 - 2R_18632585_18632591_- 0.782911824 0.782911824 0.782911824 0 CG30122 FBtr0086660|FBtr0300924|FBtr0300923 18632326|18632326|18632326 18632821|18632821|18632821 2R - 18632567 18632658 3'utr CG30122 FlyBase G24773.1 AAACCAAACAATTGCGAGGGCTAACCAAACCCTAAGTCAAAATTCTTACCTTACCTTCGGATGGATTGTACAAAACTAAGACTACATATATC 51 18632593 0.937656251 11 47 300 0.911764706 1.491361694 0.088235294 0.254901961 0.441176471 51 5 1 62 2R:18632567-18632658 7 CG30122 FBtr0300923|FBtr0300924|FBtr0086660 18632326|18632326|18632326 18632821|18632821|18632821 GTACAAA 7mer-A1 dme-miR-305-5p 2R - 18632538 18632620 3'utr CG30122 FlyBase G18736.1 AAAATTCTTACCTTACCTTCGGATGGATTGTACAAAACTAAGACTACATATATCATTTGAAATTGAACGTGAATGTTTCGCTT 34 18632593 0.972391331 10 31 222 0.94 1.371067862 0.04 0.352941176 0.56 34 2 1 47 2R:18632538-18632620 7 33 1614 FBgn0050122 2646.33 69.24 106.41 0.0124701 0.47660312 0.310121229 2 2 2 0.01 dme-miR-999-3p 7mer-m8 AGTTAAC 2R 18632751 18632757 - 2R_18632751_18632757_- 0.674514267 0.674514267 0.674514267 0 CG30122 FBtr0086660|FBtr0300924|FBtr0300923 18632326|18632326|18632326 18632821|18632821|18632821 2R - 18632694 18632760 3'utr CG30122 FlyBase G24774.1 AGGAGTTAACCACAAATCTGAACTAAACTTTATATAATAGTTTTAAACGATTAACGAACAGTAAAAC 9 18632732 0.980233219 6 9 58 1 0.954242509 0.111111111 0 0 9 0 0 9 2R:18632694-18632760 7 CG30122 FBtr0300923|FBtr0300924|FBtr0086660 18632326|18632326|18632326 18632821|18632821|18632821 AGTTAAC 7mer-m8 dme-miR-999-3p 2R - 18632694 18632760 3'utr CG30122 FlyBase G18738.1 AGGAGTTAACCACAAATCTGAACTAAACTTTATATAATAGTTTTAAACGATTAACGAACAGTAAAAC 7 18632731 0.971633408 3 6 40 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 2R:18632694-18632760 7 3.5 1615 FBgn0050122 2646.33 69.24 106.41 0.001322586 0.050548816 0.032891646 -25 -26 -25.5 0.01 dme-miR-31a-5p 6mer2-7 CTTGCC 2R 18641338 18641343 - 2R_18641338_18641343_- 1 1 1 0 SP2637 FBtr0301861|FBtr0301862 18640860|18640860 18641446|18641446 2R - 18641324 18641414 5'utr SP2637 FlyBase G24798.1 CGAAAATGTCGCAGATGTGTTAATTGACTGGTGCATGTGTTAATTGTCGCTGTCCACCGCAAATGCTTCTGCTTGCCTTTTGTTTAAGTTT 18 18641338 0.687561821 10 16 170 0.857142857 0.77815125 0.238095238 0.166666667 0.285714286 18 1 2 18 2R:18641324-18641414 6 SP2637 FBtr0301861|FBtr0301862 18640860|18640860 18641446|18641446 CTTGCC 6mer2-7 dme-miR-31a-5p 2R - 18641330 18641405 5'utr SP2637 FlyBase G18754.1 CGCAGATGTGTTAATTGACTGGTGCATGTGTTAATTGTCGCTGTCCACCGCAAATGCTTCTGCTTGCCTTTTGTTT 16 18641371 0.621200146 10 13 120 0.88 1.342422681 0.12 0.3125 0.56 16 3 0 22 2R:18641330-18641405 6 5.5 1616 FBgn0034371 900.1366667 60.64 93.18 0.006110183 0.090699208 0.059025542 -5 28 11.5 0.01 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 2R 18641381 18641386 - 2R_18641381_18641386_- 0.874557437 0.999569844 0.937063641 0.088397116 SP2637 FBtr0301861|FBtr0301862 18640860|18640860 18641446|18641446 2R - 18641324 18641414 5'utr SP2637 FlyBase G24798.1 CGAAAATGTCGCAGATGTGTTAATTGACTGGTGCATGTGTTAATTGTCGCTGTCCACCGCAAATGCTTCTGCTTGCCTTTTGTTTAAGTTT 18 18641390 0.687561821 10 16 170 0.857142857 0.77815125 0.238095238 0.166666667 0.285714286 18 1 2 18 2R:18641324-18641414 6 SP2637 FBtr0301861|FBtr0301862 18640860|18640860 18641446|18641446 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 2R - 18641330 18641405 5'utr SP2637 FlyBase G18754.1 CGCAGATGTGTTAATTGACTGGTGCATGTGTTAATTGTCGCTGTCCACCGCAAATGCTTCTGCTTGCCTTTTGTTT 16 18641371 0.621200146 10 13 120 0.88 1.342422681 0.12 0.3125 0.56 16 3 0 22 2R:18641330-18641405 6 9.5 1617 FBgn0034371 900.1366667 60.64 93.18 0.010553953 0.156662269 0.101953209 4 -15 -5.5 0.01 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 2R 18658548 18658553 - 2R_18658548_18658553_- 1 1 1 0 CG42306 FBtr0299689|FBtr0299688|FBtr0340393 18658416|18658416|18658416 18660044|18660044|18660044 2R - 18658469 18658577 3'utr CG42306 FlyBase G24808.1 ACTTAAAGGAAGACCTTCTAATGCTGGTGCAGGCTATGTAGAAGTGCTTTAACCCATATATTCAGCGGTATTTGTCCCTTATATTATAACAGAGCTGTTGTTATTTATT 32 18658551 0.825056641 14 30 254 0.972972973 1.255272505 0.054054054 0.15625 0.27027027 32 0 1 36 2R:18658469-18658577 6 CG42306 FBtr0340393|FBtr0299688|FBtr0299689 18658416|18658416|18658416 18660044|18660044|18660044 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 2R - 18658531 18658592 3'utr CG42306 FlyBase G18763.1 AAACGGATATAAACTACTTAAAGGAAGACCTTCTAATGCTGGTGCAGGCTATGTAGAAGTGC 10 18658541 0.97499045 4 9 58 1 1.146128036 0.071428571 0.3 0.5 10 0 0 14 2R:18658531-18658592 6 13.5 1618 FBgn0259202 627.1666667 39.15666667 59.96 0.021525379 0.344768877 0.2251501 -2 -12 -7 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 18658818 18658824 - 2R_18658818_18658824_- 0.66161564 0.661615645 0.661615643 0 CG42306 FBtr0299689|FBtr0299688|FBtr0340393 18658416|18658416|18658416 18660044|18660044|18660044 2R - 18658731 18658845 5'utr CG42306 FlyBase G24809.1 TGTGTACGAAAAAATATCCGATGTGTTCGAGTTTGTCCAATCTTGCCTGGCGGACGAAAGCCTGGATTTTAGCTTGGTGTCCAACAGCGATGGCAAACTGGGCGATGAGGACTTG 22 18658824 0.980418377 8 21 151 0.96 1.380211242 0.04 0.136363636 0.24 22 1 0 24 2R:18658731-18658845 7 CG42306 FBtr0340393|FBtr0299688|FBtr0299689 18658416|18658416|18658416 18660044|18660044|18660044 TGTGTTC 7mer-m8 dme-miR-317-3p 2R - 18658788 18658835 5'utr CG42306 FlyBase G18764.1 AAAATATCCGATGTGTTCGAGTTTGTCCAATCTTGCCTGGCGGACGAA 5 18658824 0.974173228 2 4 27 1 0.84509804 0 0.2 0.428571429 5 0 0 7 2R:18658788-18658835 7 7.5 1619 FBgn0259202 627.1666667 39.15666667 59.96 0.011958544 0.191538265 0.125083389 0 0 0 0.01 dme-miR-965-3p 7mer-m8 TACGCTT 2R 18658958 18658964 - 2R_18658958_18658964_- 0.620204855 0.620204855 0.620204855 0 CG42306 FBtr0299689|FBtr0299688|FBtr0340393 18658416|18658416|18658416 18660044|18660044|18660044 2R - 18658921 18659000 5'utr CG42306 FlyBase G24810.1 GAACGCGAGGAGCAGCGCAATTTGCGCATGTATCGATACGCTTTAGTCAGGGTTAAATTTCCCAATGGACTCTTTATACA 88 18658964 0.985590529 12 82 683 0.951923077 1.393575203 0.240384615 0.159090909 0.288461538 88 2 3 99 2R:18658921-18659000 7 CG42306 FBtr0340393|FBtr0299688|FBtr0299689 18658416|18658416|18658416 18660044|18660044|18660044 TACGCTT 7mer-m8 dme-miR-965-3p 2R - 18658922 18658998 5'utr CG42306 FlyBase G18765.1 ACGCGAGGAGCAGCGCAATTTGCGCATGTATCGATACGCTTTAGTCAGGGTTAAATTTCCCAATGGACTCTTTATAC 52 18658964 0.983447231 7 51 398 1 1.875061263 0.306666667 0.288461538 0.506666667 52 0 0 75 2R:18658922-18658998 7 56 1620 FBgn0259202 627.1666667 39.15666667 59.96 0.08929046 1.430152379 0.933955971 0 0 0 0.01 dme-miR-276a-3p 6mer3-8 AGTTCC 2R 18659853 18659858 - 2R_18659853_18659858_- 1 1 1 0 CG42306 FBtr0299689|FBtr0299688|FBtr0340393 18658416|18658416|18658416 18660044|18660044|18660044 2R - 18659843 18659918 5'utr CG42306 FlyBase G24814.1 GGCAGCGGCATGGGCACTGGCCACAAGCTGAATTCCCCCAAACAGGAGACTCCTTCAAGTAGTTCCCGCCAAAAGT 13 18659856 0.880017291 5 13 48 1 1.113943352 0.153846154 0 0 13 0 0 13 2R:18659843-18659918 6 CG42306 FBtr0340393|FBtr0299688|FBtr0299689 18658416|18658416|18658416 18660044|18660044|18660044 AGTTCC 6mer3-8 dme-miR-276a-3p 2R - 18659843 18659876 5'utr CG42306 FlyBase G18768.1 CAGGAGACTCCTTCAAGTAGTTCCCGCCAAAAGT 13 18659856 0.740489111 2 12 52 1 1.230448921 0.235294118 0.307692308 0.470588235 13 0 0 17 2R:18659843-18659876 6 9 1621 FBgn0259202 627.1666667 39.15666667 59.96 0.014350252 0.229845918 0.150100067 -2 -2 -2 0.01 dme-miR-33-5p 6mer3-8 CAATGC 2R 18667587 18667592 - 2R_18667587_18667592_- 1 1 1 0 edl FBtr0086652 18667525 18667828 2R - 18667541 18667664 3'utr edl FlyBase G24818.1 AGATTGCTTCAAGTTTTCAATTCATTTTGAAAGAAAAGTGATTGGAGTGAATAGAATAAAAGATTGAAGTTACAATGCTGTCCTATTAGTTAACTAAGTTCGCATATGATGAAAATATAAAATG 1064 18667589 0.878959278 27 1022 10526 0.958064516 2.171726454 0.253225806 0.142857143 0.264516129 1064 45 7 1188 2R:18667541-18667664 6 edl FBtr0086652 18667525 18667828 CAATGC 6mer3-8 dme-miR-33-5p 2R - 18667527 18667654 3'utr edl FlyBase G18770.1 AAGTTTTCAATTCATTTTGAAAGAAAAGTGATTGGAGTGAATAGAATAAAAGATTGAAGTTACAATGCTGTCCTATTAGTTAACTAAGTTCGCATATGATGAAAATATAAAATGAAATTTTATAACTG 653 18667589 0.989705681 25 614 6020 0.94438723 2.184218085 0.270854789 0.370597243 0.576725026 653 49 5 917 2R:18667527-18667654 6 693.5 1622 FBgn0023214 335.02 28.75666667 44.53 2.07002567 24.11614698 15.57377049 -3 -3 -3 0.01 dme-miR-8-3p 7mer-A1 AGTATTA 2R 18667696 18667702 - 2R_18667696_18667702_- 0.823349562 0.8233434 0.823346481 4.38E-06 edl FBtr0086652 18667525 18667828 2R - 18667676 18667753 3'utr edl FlyBase G24819.1 TCTAGTTATGCTAGCTTATAATGCCTAGTCCTTAGTTCTGCTCGTCATTTAAGTATTAGCGATAATATTCTGCATTTC 42 18667699 0.815674908 17 39 392 0.9375 1.176091259 0.083333333 0.095238095 0.208333333 42 1 2 45 2R:18667676-18667753 7 edl FBtr0086652 18667525 18667828 AGTATTA 7mer-A1 dme-miR-8-3p 2R - 18667680 18667746 3'utr edl FlyBase G18771.1 ATGCTAGCTTATAATGCCTAGTCCTTAGTTCTGCTCGTCATTTAAGTATTAGCGATAATATTCTGCA 29 18667721 0.732285855 12 29 243 1 1.633468456 0.11627907 0.379310345 0.581395349 29 0 0 43 2R:18667680-18667746 7 19.5 1623 FBgn0023214 335.02 28.75666667 44.53 0.05820548 0.678103628 0.437907029 -3 19 8 0.01 dme-miR-307a-3p 6mer3-8 GGTTGT 2R 18667783 18667788 - 2R_18667783_18667788_- 1 1 1 0 edl FBtr0086652 18667525 18667828 2R - 18667766 18667902 stop_codon edl FlyBase G24820.1 TTCCCGTGGGCGGCAAGATGCTCTACCGCGACTTCCGGGTGCGACTCGCCCGAGCAATGGCCCTGCTATCATAGGGATTACCCATATATCTCACGGATACCCAGTCCTCTCTATGGTTGTACATATCTCTAGGATTC 300 18667789 0.82265435 27 270 2591 0.902506964 1.095571662 0.114206128 0.163333333 0.300835655 300 10 25 324 2R:18667766-18667902 6 edl FBtr0086652 18667525 18667828 GGTTGT 6mer3-8 dme-miR-307a-3p 2R - 18667765 18667902 stop_codon edl FlyBase G18772.1 TTCCCGTGGGCGGCAAGATGCTCTACCGCGACTTCCGGGTGCGACTCGCCCGAGCAATGGCCCTGCTATCATAGGGATTACCCATATATCTCACGGATACCCAGTCCTCTCTATGGTTGTACATATCTCTAGGATTCG 209 18667789 0.922196601 20 181 1682 0.858044164 0.94320721 0.19873817 0.365384615 0.583596215 208 15 30 272 2R:18667765-18667902 6 192.5 1624 FBgn0023214 335.02 28.75666667 44.53 0.574592562 6.694099919 4.322928363 1 1 1 0.01 dme-miR-308-3p 8mer-m1 CTGTGATT 2R 18705649 18705656 + 2R_18705649_18705656_+ 0.385560394 0.385560392 0.385560393 0 Sik3 FBtr0340388|FBtr0344259|FBtr0304025|FBtr0344258|FBtr0304026 18704794|18704794|18704794|18704794|18704794 18705805|18705805|18705805|18705805|18705805 2R + 18705602 18705701 3'utr Sik3 FlyBase G17298.1 ACGGATTAAACACAACATTGATAAATCTATTTTTTAATGAAAGACTGCTGTGATTTTACATGTAATTAATTTAGAGCGAAAGAAGGTAGGAGTAAATAAC 277 18705647 0.987338983 20 271 2392 0.973988439 2.527629901 0.046242775 0.198555957 0.358381503 277 9 0 337 2R:18705602-18705701 8 Sik3 FBtr0304026|FBtr0340388|FBtr0344259|FBtr0304025|FBtr0344258 18704794|18704794|18704794|18704794|18704794 18705805|18705805|18705805|18705805|18705805 CTGTGATT 8mer-m1 dme-miR-308-3p 2R + 18705620 18705693 3'utr Sik3 FlyBase G13186.1 TGATAAATCTATTTTTTAATGAAAGACTGCTGTGATTTTACATGTAATTAATTTAGAGCGAAAGAAGGTAGGAG 262 18705647 0.987533432 15 259 2301 0.984415584 2.57863921 0.051948052 0.351145038 0.558441558 262 6 0 379 2R:18705620-18705693 8 261.5 1625 FBgn0262103 424.8866667 8.64 13.18 0.61545824 30.2662037 19.84066768 2 2 2 0.01 dme-miR-276a-3p 6mer3-8 AGTTCC 2R 18773994 18773999 + 2R_18773994_18773999_+ 1 1 1 0 Mctp FBtr0346955|FBtr0330004|FBtr0110970|FBtr0345950|FBtr0330005|FBtr0110971 18773742|18773952|18773742|18773742|18773742|18773742 18774667|18774667|18774667|18774824|18774667|18774667 2R + 18773862 18774077 3'utr Mctp FlyBase G17316.1 TGATGCAGCGCTTCCGGGCCAACACCAGCCAGTTGAAGCACAAGTTTGGCCAGGCCAAGAGCCTCAGTCTGAGCCATAGCGAATTCAATTAGACACCAAAGTTAGTTAGCTAGTTAAGAATCGAAGTCAACCAGTTCCACCCATAGAAGGAAACAACACACGCAATTCACCTTGACTCAATTATGCAGCACAAAATTGCTTTACTTATTTTAATAT 246 18773996 0.905648492 25 236 1143 0.939799331 1.971585065 0.193979933 0.174796748 0.321070234 246 16 2 281 2R:18773862-18774077 6 Mctp FBtr0330005|FBtr0110971|FBtr0346955|FBtr0330004|FBtr0110970|FBtr0345950 18773742|18773742|18773742|18773952|18773742|18773742 18774667|18774667|18774667|18774667|18774667|18774824 AGTTCC 6mer3-8 dme-miR-276a-3p 2R + 18773842 18774020 3'utr Mctp FlyBase G13200.1 CGGCGGAAGGCAGCAGCAGTTGATGCAGCGCTTCCGGGCCAACACCAGCCAGTTGAAGCACAAGTTTGGCCAGGCCAAGAGCCTCAGTCTGAGCCATAGCGAATTCAATTAGACACCAAAGTTAGTTAGCTAGTTAAGAATCGAAGTCAACCAGTTCCACCCATAGAAGGAAACAACAC 102 18773996 0.965449706 15 90 427 0.918367347 2.130333768 0.197278912 0.396039604 0.585034014 101 12 0 135 2R:18773842-18774020 6 75.5 1626 FBgn0034389 335.3666667 10.34333333 15.83333333 0.225126727 7.299387689 4.768421053 -2 -2 -2 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2R 18774214 18774219 + 2R_18774214_18774219_+ 1 1 1 0 Mctp FBtr0346955|FBtr0330004|FBtr0110970|FBtr0345950|FBtr0330005|FBtr0110971 18773742|18773952|18773742|18773742|18773742|18773742 18774667|18774667|18774667|18774824|18774667|18774667 2R + 18774152 18774265 3'utr Mctp FlyBase G17317.2 AAGCGATTATGTACATACACAATGATAGCGGATATAAATAGGAATCTATTGAAACATTGCATGTACCTAAGGTAACCTCTCTCAAAGATCTATTCGAATATTTACCAAAACTCA 124 18774213 0.777117406 18 117 790 0.954248366 1.687231601 0.117647059 0.185483871 0.339869281 124 5 2 146 2R:18774152-18774265 6 Mctp FBtr0330005|FBtr0110971|FBtr0346955|FBtr0330004|FBtr0110970|FBtr0345950 18773742|18773742|18773742|18773952|18773742|18773742 18774667|18774667|18774667|18774667|18774667|18774824 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2R + 18774187 18774250 3'utr Mctp FlyBase G13202.2 AAATAGGAATCTATTGAAACATTGCATGTACCTAAGGTAACCTCTCTCAAAGATCTATTCGAAT 63 18774213 0.776665747 10 61 381 0.958762887 1.968482949 0.072164948 0.428571429 0.628865979 63 4 0 93 2R:18774187-18774250 6 72 1627 FBgn0034389 335.3666667 10.34333333 15.83333333 0.214690389 6.961005479 4.547368421 1 1 1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 18774336 18774342 + 2R_18774336_18774342_+ 0.801957488 0.801970437 0.801963963 9.12E-06 Mctp FBtr0346955|FBtr0346955|FBtr0346955|FBtr0330004|FBtr0330004|FBtr0330004|FBtr0110970|FBtr0110970|FBtr0110970|FBtr0345950|FBtr0345950|FBtr0345950|FBtr0330005|FBtr0330005|FBtr0330005|FBtr0110971|FBtr0110971|FBtr0110971 18773742|18773742|18773742|18773952|18773952|18773952|18773742|18773742|18773742|18773742|18773742|18773742|18773742|18773742|18773742|18773742|18773742|18773742 18774667|18774667|18774667|18774667|18774667|18774667|18774667|18774667|18774667|18774824|18774824|18774824|18774667|18774667|18774667|18774667|18774667|18774667 2R + 18774280 18774507 3'utr Mctp FlyBase G17318.1 AGATTCCTTTTTGCGCGAATCCAAATGCGATTAATTATTTATTGTGTATTTCAATTTGTGATATTTTCAAAGAATTTTGCAACTAGGCTTACTACTTAATGTGACTTAAACCACGGAAGCTCCGTACCGCACAGAAGTTTCCCCCAAACTCCATTTACAATTTACCACTCGATTGCACTCGACTCGTTTAAGGACGCTTTTTCATTATATACCTTTACATATATACCT 159 18774334 0.92636924 40 153 1654 0.970149254 2.290034611 0.114427861 0.194968553 0.36318408 159 6 0 195 2R:18774280-18774507 7 Mctp FBtr0330005|FBtr0330005|FBtr0330005|FBtr0110971|FBtr0110971|FBtr0110971|FBtr0346955|FBtr0346955|FBtr0346955|FBtr0330004|FBtr0330004|FBtr0330004|FBtr0110970|FBtr0110970|FBtr0110970|FBtr0345950|FBtr0345950|FBtr0345950 18773742|18773742|18773742|18773742|18773742|18773742|18773742|18773742|18773742|18773952|18773952|18773952|18773742|18773742|18773742|18773742|18773742|18773742 18774667|18774667|18774667|18774667|18774667|18774667|18774667|18774667|18774667|18774667|18774667|18774667|18774667|18774667|18774667|18774824|18774824|18774824 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 18774316 18774405 3'utr Mctp FlyBase G13204.1 ATTTATTGTGTATTTCAATTTGTGATATTTTCAAAGAATTTTGCAACTAGGCTTACTACTTAATGTGACTTAAACCACGGAAGCTCCGTA 108 18774334 0.764711591 14 99 1191 0.915584416 1.848189117 0.168831169 0.342592593 0.538961039 108 12 1 141 2R:18774316-18774405 7 87 1628 FBgn0034389 335.3666667 10.34333333 15.83333333 0.259417553 8.411214953 5.494736842 2 2 2 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2R 18794753 18794758 - 2R_18794753_18794758_- 1 1 1 0 MFS15 FBtr0086636|FBtr0086637 18794616|18794616 18794808|18794808 2R - 18794690 18794794 3'utr MFS15 FlyBase G24838.1 CGTGGCCTAAGGATTGGTTGTAGATGTGAAACATTTGTACCTTGAAGGCGAAGCATTCCTTGGAATTGATGAATCGCAATTAGTATCGTATTACTAGTTATACAC 155 18794759 0.843930028 15 151 1016 0.978142077 2.252853031 0.398907104 0.15483871 0.284153005 155 4 0 179 2R:18794690-18794794 6 MFS15 FBtr0086637|FBtr0086636 18794616|18794616 18794808|18794808 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2R - 18794689 18794791 3'utr MFS15 FlyBase G18790.1 GGCCTAAGGATTGGTTGTAGATGTGAAACATTTGTACCTTGAAGGCGAAGCATTCCTTGGAATTGATGAATCGCAATTAGTATCGTATTACTAGTTATACACG 104 18794759 0.977631924 14 101 669 0.972222222 2.146128036 0.381944444 0.317307692 0.506944444 104 4 0 140 2R:18794689-18794791 6 114.5 1629 FBgn0034392 393.6666667 26.16666667 39.91 0.290855207 4.375796178 2.868955149 1 1 1 0.01 dme-miR-11-3p 7mer-m1 TGTGATG 2R 18797094 18797100 - 2R_18797094_18797100_- 0.612071121 0.612071121 0.612071121 0 l(2)08717 FBtr0345426 18796973 18797478 2R - 18797070 18797124 3'utr l(2)08717 FlyBase G24849.1 TTAAGTTAGGCATTAGCGAAAACTTGTGATGAAAAAAGTAAACTAAAAAAGGCAA 467 18797101 0.808376542 6 422 2218 0.912162162 1.119609903 0.089527027 0.207708779 0.375 467 12 40 540 2R:18797070-18797124 7 l(2)08717 FBtr0345426 18796973 18797478 TGTGATG 7mer-m1 dme-miR-11-3p 2R - 18797069 18797122 3'utr l(2)08717 FlyBase G18796.1 AAGTTAGGCATTAGCGAAAACTTGTGATGAAAAAAGTAAACTAAAAAAGGCAAA 334 18797101 0.801552329 5 297 1513 0.902083333 1.117973956 0.070833333 0.317365269 0.525 334 15 32 433 2R:18797069-18797122 7 397 1630 FBgn0010651 461.1766667 23.46 35.57 0.860841471 16.92242114 11.16109081 1 1 1 0.01 dme-miR-252-5p 6mer3-8 GTACTT 2R 18821341 18821346 + 2R_18821341_18821346_+ 1 1 1 0 Phb2 FBtr0086616|FBtr0086615|FBtr0086614|FBtr0112863 18821290|18821290|18821290|18821290 18821839|18821839|18821839|18821839 2R + 18821308 18821358 3'utr Phb2 FlyBase G17331.1 CAAAAAGAGTTTACTTTTAAGTTGAAAACACTTGTACTTTTGGTTTCAATC 20 18821340 0.98698034 5 20 181 1 1.380211242 0.166666667 0.2 0.333333333 20 0 0 24 2R:18821308-18821358 6 Phb2 FBtr0086615|FBtr0086614|FBtr0112863|FBtr0086616 18821290|18821290|18821290|18821290 18821839|18821839|18821839|18821839 GTACTT 6mer3-8 dme-miR-252-5p 2R + 18821326 18821393 3'utr Phb2 FlyBase G13214.1 AAGTTGAAAACACTTGTACTTTTGGTTTCAATCACATTGGCCAAAACTTAGACATAGCCTTCATAATT 22 18821340 0.854977068 9 22 164 1 1.531478917 0.294117647 0.454545455 0.647058824 22 0 0 34 2R:18821326-18821393 6 17.5 1631 FBgn0010551 1156.073333 96.49666667 146.7133333 0.015137448 0.181353415 0.119280229 1 1 1 0.01 dme-miR-986-5p 6mer2-7 TTCGAG 2R 18821554 18821559 + 2R_18821554_18821559_+ 1 1 1 0 Phb2 FBtr0086616|FBtr0112861|FBtr0086615|FBtr0086614|FBtr0112863 18821290|18821508|18821290|18821290|18821290 18821839|18821839|18821839|18821839|18821839 2R + 18821543 18821595 3'utr Phb2 FlyBase G17334.1 ATTGAAATTCCTTCGAGCTAGAGCCTAAGTACCGTTTAGTTTTAACCACTCCC 7 18821550 0.985069156 3 6 50 0.875 0.84509804 0.125 0.142857143 0.25 7 1 0 7 2R:18821543-18821595 6 Phb2 FBtr0086615|FBtr0086614|FBtr0112863|FBtr0086616|FBtr0112861 18821290|18821290|18821290|18821290|18821508 18821839|18821839|18821839|18821839|18821839 TTCGAG 6mer2-7 dme-miR-986-5p 2R + 18821543 18821573 3'utr Phb2 FlyBase G13215.1 ATTGAAATTCCTTCGAGCTAGAGCCTAAGTA 6 18821551 0.66355227 3 5 34 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2R:18821543-18821573 6 5 1632 FBgn0010551 1156.073333 96.49666667 146.7133333 0.004324985 0.051815261 0.034080065 4 3 3.5 0.01 dme-miR-263a-5p 6mer3-8 GTGCCA 2R 18821690 18821695 + 2R_18821690_18821695_+ 1 1 1 0 Phb2 FBtr0112861|FBtr0086615|FBtr0086614|FBtr0112863 18821508|18821290|18821290|18821290 18821839|18821839|18821839|18821839 2R + 18821677 18821710 3'utr Phb2 FlyBase G17335.1 ATCCGTTCACTGGGTGCCAAGGATTGAAACACGG 22 18821687 0.728859539 4 21 93 0.965517241 1.447158031 0.172413793 0.272727273 0.448275862 22 1 0 28 2R:18821677-18821710 6 Phb2 FBtr0086615|FBtr0086614|FBtr0112863|FBtr0112861 18821290|18821290|18821290|18821508 18821839|18821839|18821839|18821839 GTGCCA 6mer3-8 dme-miR-263a-5p 2R + 18821677 18821702 3'utr Phb2 FlyBase G13216.1 ATCCGTTCACTGGGTGCCAAGGATTG 20 18821687 0.737826102 3 17 81 0.866666667 1.414973348 0.4 0.3 0.533333333 20 4 0 26 2R:18821677-18821702 6 21 1633 FBgn0010551 1156.073333 96.49666667 146.7133333 0.018164938 0.217624098 0.143136275 3 3 3 0.01 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 18822136 18822143 + 2R_18822136_18822143_+ 0.605654138 0.605654138 0.605654138 0 Phb2 FBtr0112862 18822099 18822250 2R + 18822046 18822155 stop_codon Phb2 FlyBase G17337.1 GAAGGAGAAGAACGTGGGCAACGTGGCGAGCAGCATGGCCGAGCGGATGATGTGATCCACACCTTAGCGGGGGCTTCCTGTCAAGATCCTAGTACAAAGCGCATACAGAA 31 18822135 0.971134777 7 24 133 0.815789474 1.190331698 0.342105263 0.193548387 0.342105263 31 6 1 31 2R:18822046-18822155 8 Phb2 FBtr0112862 18822099 18822250 AGTACAAA 8mer-A1 dme-miR-305-5p 2R + 18822109 18822161 3'utr Phb2 FlyBase G13218.1 TTAGCGGGGGCTTCCTGTCAAGATCCTAGTACAAAGCGCATACAGAACAGAGC 23 18822135 0.951850554 5 15 116 0.676470588 0.884606581 0.235294118 0.347826087 0.558823529 23 9 2 23 2R:18822109-18822161 8 21.5 1634 FBgn0010551 1156.073333 96.49666667 146.7133333 0.018597436 0.222805624 0.146544281 1 1 1 0.01 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2R 18822378 18822385 - 2R_18822378_18822385_- 0.63113665 0.63113665 0.63113665 0 CG15097 FBtr0303237|FBtr0330604|FBtr0086630|FBtr0330605 18822186|18822186|18822186|18822186 18822959|18822608|18822959|18822581 2R - 18822327 18822400 3'utr CG15097 FlyBase G24859.1 ACACACACACATGTTTCTAGTCAAGATCTCTCACACACACACAACATGGGAATGCCGCGGGGACACAACTCCTG 133 18822386 0.999702155 8 127 871 0.960784314 1.69019608 0.019607843 0.135338346 0.248366013 133 4 2 147 2R:18822327-18822400 8 CG15097 FBtr0330605|FBtr0086630|FBtr0330604|FBtr0303237 18822186|18822186|18822186|18822186 18822581|18822959|18822608|18822959 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R - 18822357 18822400 3'utr CG15097 FlyBase G18804.1 ACACACACACATGTTTCTAGTCAAGATCTCTCACACACACACAA 74 18822386 0.83947615 9 71 461 0.965217391 2.045322979 0.017391304 0.432432432 0.634782609 74 4 0 111 2R:18822357-18822400 8 101 1635 FBgn0034396 75.66666667 3.096666667 4.676666667 1.334801762 32.61571582 21.59657876 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 18833538 18833543 - 2R_18833538_18833543_- 1 1 1 0 CG15098 FBtr0086629 18833370 18833650 2R - 18833476 18833565 3'utr CG15098 FlyBase G24867.1 CAATATTTTTCTAGCTAGTAGCACCAAAATTATATACTACGTTGTATTTCATGCATCAGAGAATGAAAATCTGTGTGTACATCATATATA 63 18833536 0.894179267 16 61 431 0.958333333 1.537819095 0.097222222 0.126984127 0.236111111 63 2 1 69 2R:18833476-18833565 6 CG15098 FBtr0086629 18833370 18833650 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 18833525 18833564 3'utr CG15098 FlyBase G18812.1 AATATTTTTCTAGCTAGTAGCACCAAAATTATATACTACG 22 18833536 0.829882296 7 19 150 0.9 1.431363764 0.033333333 0.318181818 0.5 22 3 0 27 2R:18833525-18833564 6 28.5 1636 FBgn0034398 1735.853333 226.72 344.04 0.016418438 0.125705716 0.082839205 -7 -7 -7 0.01 dme-miR-1003-3p 7mer-m8 ATGTGAG 2R 18836879 18836885 - 2R_18836879_18836885_- 0.671796206 0.671796207 0.671796206 0 CG15099 FBtr0086628 18836819 18837346 2R - 18836820 18837117 stop_codon CG15099 FlyBase G24874.1 CCAACTTTCCATTTTATGTCTAAGTAAGCAGATTGGAGCAGAAGACGATGCCGAGTATGATAGCTAGCTATATAGATAGAGAACTGTGTCGAGAGTATATAATTGTCCGTAGTGTGATCGATCGTTTTAAATGTTGAATGTTTAAGAACGCGGTAGCCCAATAGCCAATAGCACCCTGTATGTATATGTATGTAACCAATGTATTTAACTGTTGATAGTTGATCCCAAGTCGATGTGAGTAAGAGATGTGCGTTAACGACAAACTGCAATCAAATAAAAAACAAAGCATTTTATTGCA 223 18836899 0.987241876 50 186 1633 0.816176471 1.443262987 0.202205882 0.188340807 0.334558824 223 43 7 222 2R:18836820-18837117 7 CG15099 FBtr0086628 18836819 18837346 ATGTGAG 7mer-m8 dme-miR-1003-3p 2R - 18836861 18837123 stop_codon CG15099 FlyBase G18818.1 AGATGACCAACTTTCCATTTTATGTCTAAGTAAGCAGATTGGAGCAGAAGACGATGCCGAGTATGATAGCTAGCTATATAGATAGAGAACTGTGTCGAGAGTATATAATTGTCCGTAGTGTGATCGATCGTTTTAAATGTTGAATGTTTAAGAACGCGGTAGCCCAATAGCCAATAGCACCCTGTATGTATATGTATGTAACCAATGTATTTAACTGTTGATAGTTGATCCCAAGTCGATGTGAGTAAGAGATGTGCGTTAAC 167 18836899 0.94438242 44 136 1187 0.812244898 1.395763089 0.220408163 0.293413174 0.518367347 167 39 7 199 2R:18836861-18837123 7 23.5 1637 FBgn0034400 3071.393333 43.47333333 66.98666667 0.007651251 0.540561264 0.350816083 14 14 14 0.01 dme-miR-986-5p 6mer2-7 TTCGAG 2R 18837284 18837289 - 2R_18837284_18837289_- 1 1 1 0 CG15099 FBtr0086628 18836819 18837346 2R - 18837228 18837322 3'utr CG15099 FlyBase G24876.1 ACGCAGTCGCAGATCCAAGCGAGTGGGTCACACTTCGAGCTCAAGCTGAACCTGAACCTAGGTATGGAGTCTGCCATGGAGTCGGGCAGTACTGG 35 18837288 0.951119793 10 33 143 0.972222222 1.544068044 0.361111111 0.058823529 0.111111111 34 1 0 35 2R:18837228-18837322 6 CG15099 FBtr0086628 18836819 18837346 TTCGAG 6mer2-7 dme-miR-986-5p 2R - 18837233 18837306 3'utr CG15099 FlyBase G18819.1 AAGCGAGTGGGTCACACTTCGAGCTCAAGCTGAACCTGAACCTAGGTATGGAGTCTGCCATGGAGTCGGGCAGT 16 18837288 0.717558608 7 15 74 0.947368421 1.255272505 0.421052632 0.1875 0.315789474 16 1 0 18 2R:18837233-18837306 6 16.5 1638 FBgn0034400 3071.393333 43.47333333 66.98666667 0.005372155 0.379543015 0.246317675 -1 -1 -1 0.01 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 18846948 18846955 - 2R_18846948_18846955_- 0.625364269 0.625364269 0.625364269 0 CG15100 FBtr0086627 18846856 18847082 2R - 18846901 18847065 3'utr CG15100 FlyBase G24926.1 TAAAAATCACGCTGGACGCTTTTACCTCAGCCCTTTTAATCAGGCATTCGATGGCAAATCTTTAGTCACGGACTGGCACAGTTCAATTCATCTCCCATAAGTTTTGCGTTTGCATTTAACAACCTTTTGTATTTATTCGAAGTATGGCTAAATATTCAGTTAGTA 38 18846956 0.797852664 12 38 298 1 1.643452676 0.113636364 0.105263158 0.227272727 38 0 0 44 2R:18846901-18847065 8 CG15100 FBtr0086627 18846856 18847082 TGCATTTA 8mer-A1 dme-miR-277-3p 2R - 18846928 18846967 3'utr CG15100 FlyBase G18855.1 AAGTTTTGCGTTTGCATTTAACAACCTTTTGTATTTATTC 11 18846956 0.989241882 2 10 103 0.923076923 1.079181246 0 0.181818182 0.307692308 11 1 0 12 2R:18846928-18846967 8 12.5 1639 FBgn0034401 874.54 30.91333333 47.1 0.014293228 0.404356265 0.265392781 1 1 1 0.01 dme-miR-14-3p 7mer-m8 AAGACTG 2R 18971406 18971412 - 2R_18971406_18971412_- 0.671773488 0.671795832 0.67178466 1.58E-05 CG15107 FBtr0331978|FBtr0086600 18971307|18971307 18971590|18971590 2R - 18971383 18971423 3'utr CG15107 FlyBase G24977.1 TAGTCGTTTTTAAGACTGTTGTTATGCATATCGTTCGACGA 9 18971403 0.633926329 4 7 86 0.818181818 0.954242509 0.090909091 0.222222222 0.363636364 9 2 0 9 2R:18971383-18971423 7 CG15107 FBtr0086600|FBtr0331978 18971307|18971307 18971590|18971590 AAGACTG 7mer-m8 dme-miR-14-3p 2R - 18971401 18971422 3'utr CG15107 FlyBase G18891.1 AGTCGTTTTTAAGACTGTTGTT 5 18971405 0.788339959 2 2 27 0.444444444 0.602059991 0.777777778 0.4 0.666666667 5 5 0 4 2R:18971401-18971422 7 6.5 1640 FBgn0041702 455.9833333 51.29666667 78.86 0.014254907 0.126713887 0.08242455 -9 -7 -8 0.01 dme-miR-1007-3p 6mer3-8 TGAGCT 2R 18971536 18971541 - 2R_18971536_18971541_- 0.999773301 1 0.999886651 0.000160301 CG15107 FBtr0331978|FBtr0086600 18971307|18971307 18971590|18971590 2R - 18971510 18971605 stop_codon CG15107 FlyBase G24978.1 GTTCCGGAATTATAGCCCATGCTAGCCATGCACATTGATATAATGTATAATGTAATATAATATGTGAGCTCAGAGGGACCTGCTGATTTCGCCTCG 25 18971522 0.856713146 10 22 142 0.903225806 1.447158031 0.419354839 0.2 0.35483871 25 3 0 28 2R:18971510-18971605 6 CG15107 FBtr0086600|FBtr0331978 18971307|18971307 18971590|18971590 TGAGCT 6mer3-8 dme-miR-1007-3p 2R - 18971510 18971552 3'utr CG15107 FlyBase G18892.1 AATATAATATGTGAGCTCAGAGGGACCTGCTGATTTCGCCTCG 14 18971522 0.691002842 4 14 63 1 1.397940009 0.52 0.357142857 0.64 14 0 0 25 2R:18971510-18971552 6 16.5 1641 FBgn0041702 455.9833333 51.29666667 78.86 0.036185533 0.321658327 0.20923155 -19 -19 -19 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2R 19133203 19133208 + 2R_19133203_19133208_+ 1 1 1 0 botv FBtr0086579 19133117 19133706 2R + 19133050 19133222 stop_codon botv FlyBase G17377.1 CGAGCGGACTCCATTCTCTTCAAGACGCGCATCCCGCACGACAAGCAAAAGTGCTTCAAGTACATCTAGTCGTACAACTGATCCCAGAATCCCTATTCCGACAAAGGCGGCCACTTCACTTATTATAACGAGGTGATCACCAGCTGAATGACTTCTAGTTGTAAGTAAAACTT 137 19133205 0.787927289 25 131 885 0.942675159 2.170261715 0.070063694 0.102189781 0.21656051 137 9 0 148 2R:19133050-19133222 6 botv FBtr0086579 19133117 19133706 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 19133045 19133224 stop_codon botv FlyBase G13244.1 AGTACCGAGCGGACTCCATTCTCTTCAAGACGCGCATCCCGCACGACAAGCAAAAGTGCTTCAAGTACATCTAGTCGTACAACTGATCCCAGAATCCCTATTCCGACAAAGGCGGCCACTTCACTTATTATAACGAGGTGATCACCAGCTGAATGACTTCTAGTTGTAAGTAAAACTTAT 68 19133205 0.979698851 15 61 440 0.91 1.481920138 0.13 0.338235294 0.55 68 7 2 91 2R:19133045-19133224 6 57.5 1642 FBgn0027535 455.35 15.33 23.50666667 0.126276491 3.750815395 2.446114577 -2 -2 -2 0.01 dme-miR-12-5p 6mer2-7 ATACTC 2R 19133438 19133443 + 2R_19133438_19133443_+ 0.99991887 1 0.999959435 5.73E-05 botv FBtr0086579 19133117 19133706 2R + 19133392 19133473 3'utr botv FlyBase G17379.1 GAACAAATCGTATAATCTGTGAAAACCAAAACAAGCCCATATGTATATACTCTAAATGGACACAAGTTAGCCACTGATAAGC 9 19133448 0.958560744 5 9 46 1 1.041392685 0 0.222222222 0.363636364 9 0 0 11 2R:19133392-19133473 6 botv FBtr0086579 19133117 19133706 ATACTC 6mer2-7 dme-miR-12-5p 2R + 19133437 19133486 3'utr botv FlyBase G13245.1 TATACTCTAAATGGACACAAGTTAGCCACTGATAAGCCAATCGAGATAGC 7 19133448 0.959353082 3 6 30 1 1.113943352 0.307692308 0.571428571 0.769230769 7 0 0 13 2R:19133437-19133486 6 3.5 1643 FBgn0027535 455.35 15.33 23.50666667 0.007686395 0.228310502 0.148893931 -10 -10 -10 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 2R 19133618 19133623 + 2R_19133618_19133623_+ 1 1 1 0 botv FBtr0086579 19133117 19133706 2R + 19133570 19133660 3'utr botv FlyBase G17380.1 AGGAAATAGTCTTGAGTAGAGATACCAAATCAAATTTTGAGACTTTATTGTGTTTGCTTAATTAGCATAAGTTGTGTACCGATTTTGAATT 36 19133607 0.960860407 12 35 330 1 1.633468456 0.162790698 0.111111111 0.255813953 36 0 0 43 2R:19133570-19133660 6 botv FBtr0086579 19133117 19133706 TGTGTT 6mer3-8 dme-miR-317-3p 2R + 19133570 19133656 3'utr botv FlyBase G13246.1 AGGAAATAGTCTTGAGTAGAGATACCAAATCAAATTTTGAGACTTTATTGTGTTTGCTTAATTAGCATAAGTTGTGTACCGATTTTG 14 19133606 0.984779594 11 14 117 1 1.342422681 0.454545455 0.428571429 0.636363636 14 0 0 22 2R:19133570-19133656 6 15.5 1644 FBgn0027535 455.35 15.33 23.50666667 0.03403975 1.011089367 0.659387408 11 12 11.5 0.01 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2R 19134188 19134193 - 2R_19134188_19134193_- 1 1 1 0 CG15118 FBtr0086592|FBtr0086590|FBtr0086591|FBtr0113096 19133725|19133725|19133725|19133725 19134214|19134214|19134214|19134530 2R - 19134151 19134365 stop_codon CG15118 FlyBase G24989.1 AGACGACGATGGTGGCTTCCGGTATGTGGATCCCGATTTGGCCATGGCCATGCGACTGTCACAGCAAGAGCAGAGAAAGTTCGAACTGGAGCGGCAGCAGGAGCAGGAGATGATCGAGCAGGCGTTAAAGCTTAGCCTGCAAGAGCACTAATATACTATCAGCAATTCCAAATTGAAGTTATATTGATTTCAAGTGTAACCTTCGGGCTAAGTTG 70 19134182 0.98355735 23 68 521 0.974358974 1.880813592 0.307692308 0.1 0.192307692 70 2 0 76 2R:19134151-19134365 6 CG15118 FBtr0113096|FBtr0086591|FBtr0086590|FBtr0086592 19133725|19133725|19133725|19133725 19134530|19134214|19134214|19134214 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2R - 19134092 19134215 stop_codon CG15118 FlyBase G18900.2 ATATACTATCAGCAATTCCAAATTGAAGTTATATTGATTTCAAGTGTAACCTTCGGGCTAAGTTGTATAAATACTACGAGTACTTTAAGTTACCCTCGCATCCTTCTGCGCCCTGTCCTTGTTT 45 19134182 0.961756419 14 38 380 0.818181818 0.829303773 0.303030303 0.355555556 0.560606061 45 5 7 54 2R:19134092-19134215 6 36 1645 FBgn0034418 690.5133333 34.72333333 53.01 0.052135127 1.036766823 0.679117148 -11 -11 -11 0.01 dme-miR-283-5p 7mer-A1 GATATTA 2R 19140920 19140926 + 2R_19140920_19140926_+ 0.782911824 0.782911824 0.782911824 0 CG15111 FBtr0086581|FBtr0086580 19140905|19140905 19141034|19141034 2R + 19140871 19140934 stop_codon CG15111 FlyBase G17386.1 AAGTTTGTGGAGAACTACCGTGACGCCGTATACTAGGTGCGATCAACTGGATATTAATTTATGT 13 19140914 0.76680705 6 11 71 0.875 1.146128036 0.25 0.230769231 0.375 13 2 0 14 2R:19140871-19140934 7 CG15111 FBtr0086580|FBtr0086581 19140905|19140905 19141034|19141034 GATATTA 7mer-A1 dme-miR-283-5p 2R + 19140894 19140935 stop_codon CG15111 FlyBase G13251.1 CGCCGTATACTAGGTGCGATCAACTGGATATTAATTTATGTA 5 19140918 0.943838026 3 5 39 1 0.903089987 0 0.6 0.75 5 0 0 8 2R:19140894-19140935 7 5.5 1646 FBgn0034419 145.4233333 10.22333333 15.81333333 0.037820616 0.537985002 0.347807757 6 2 4 0.01 dme-miR-305-5p 6mer2-7 GTACAA 2R 19141002 19141007 + 2R_19141002_19141007_+ 1 1 1 0 CG15111 FBtr0086581|FBtr0086580 19140905|19140905 19141034|19141034 2R + 19140966 19141031 3'utr CG15111 FlyBase G17387.1 CGCAATCAAACTGACACGTTCCAAATTTTCCGCCCTGTACAAGCAAATTAAAGCAGTCGAGGAACC 39 19140993 0.870640751 6 38 255 0.977777778 1.643452676 0.066666667 0.102564103 0.222222222 39 1 0 44 2R:19140966-19141031 6 CG15111 FBtr0086580|FBtr0086581 19140905|19140905 19141034|19141034 GTACAA 6mer2-7 dme-miR-305-5p 2R + 19140954 19141017 3'utr CG15111 FlyBase G13252.1 TTAGTTTTTTACCGCAATCAAACTGACACGTTCCAAATTTTCCGCCCTGTACAAGCAAATTAAA 25 19140993 0.972801609 6 24 177 0.952380952 1.602059991 0 0.4 0.642857143 25 2 0 40 2R:19140954-19141017 6 28.5 1647 FBgn0034419 145.4233333 10.22333333 15.81333333 0.195979554 2.787740463 1.80227656 9 9 9 0.01 dme-miR-278-3p 6mer3-8 CCCACC 2R 19162210 19162215 + 2R_19162210_19162215_+ 1 1 1 0 ena FBtr0100176|FBtr0086582|FBtr0114623|FBtr0340450|FBtr0086583|FBtr0086584 19161687|19161687|19161687|19161687|19161687|19161687 19162598|19162598|19162598|19163705|19162598|19162598 2R + 19162186 19162334 3'utr ena FlyBase G17407.1 TTTTTCGTTTGTTCTCCATACTACCCCACCTCTACCTTTTAGTTTGTTATGCTCGCCGGGATTTATCTATTGTTTCGTACCAAAAAACAACAAAATCAAAATGAACAACGTTTGTAATTATACATAGAACGTATCTCTCTATACACAGC 78 19162224 0.98295812 20 74 620 0.96875 1.968482949 0.208333333 0.166666667 0.322916667 78 3 0 93 2R:19162186-19162334 6 ena FBtr0086583|FBtr0086584|FBtr0114623|FBtr0340450|FBtr0100176|FBtr0086582 19161687|19161687|19161687|19161687|19161687|19161687 19162598|19162598|19162598|19163705|19162598|19162598 CCCACC 6mer3-8 dme-miR-278-3p 2R + 19162187 19162361 3'utr ena FlyBase G13272.1 TTTTCGTTTGTTCTCCATACTACCCCACCTCTACCTTTTAGTTTGTTATGCTCGCCGGGATTTATCTATTGTTTCGTACCAAAAAACAACAAAATCAAAATGAACAACGTTTGTAATTATACATAGAACGTATCTCTCTATACACAGCCACAAAAACATGCATATATATATATAT 63 19162224 0.907698834 25 58 489 0.933333333 1.924279286 0.188888889 0.317460317 0.522222222 63 6 0 84 2R:19162187-19162361 6 22.5 1648 FBgn0000578 7091.176667 212.0766667 326.4733333 0.003172957 0.106093708 0.068918339 -14 -14 -14 0.01 dme-miR-968-5p 6mer3-8 ACTACT 2R 19162388 19162393 + 2R_19162388_19162393_+ 1 1 1 0 ena FBtr0100176|FBtr0086582|FBtr0114623|FBtr0340450|FBtr0086583|FBtr0086584 19161687|19161687|19161687|19161687|19161687|19161687 19162598|19162598|19162598|19163705|19162598|19162598 2R + 19162374 19162480 3'utr ena FlyBase G17408.1 TTTAATATATATGGACTACTCATTAAACTAACCTAAAGGGAACTAGTATTACGACTCAAAAACGAAATGAAAACAATTCCACAAACGTCATCCATCAAAGCTCCTGA 41 19162388 0.952222152 13 38 244 0.918367347 1.653212514 0.020408163 0.170731707 0.306122449 41 4 0 45 2R:19162374-19162480 6 ena FBtr0086583|FBtr0086584|FBtr0114623|FBtr0340450|FBtr0100176|FBtr0086582 19161687|19161687|19161687|19161687|19161687|19161687 19162598|19162598|19162598|19163705|19162598|19162598 ACTACT 6mer3-8 dme-miR-968-5p 2R + 19162372 19162453 3'utr ena FlyBase G13273.1 GGTTTAATATATATGGACTACTCATTAAACTAACCTAAAGGGAACTAGTATTACGACTCAAAAACGAAATGAAAACAATTCC 36 19162386 0.981496756 11 35 251 0.979591837 1.681241237 0 0.305555556 0.489795918 36 1 0 48 2R:19162372-19162453 6 27.5 1649 FBgn0000578 7091.176667 212.0766667 326.4733333 0.003878059 0.129670088 0.084233526 0 2 1 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 2R 19163187 19163192 + 2R_19163187_19163192_+ 1 1 1 0 ena FBtr0340450 19161687 19163705 2R + 19163168 19163354 3'utr ena FlyBase G17411.1 AATTTAACAATAATTTATATTGACTGTGCGAGGTTGCGTCGATATATGATATATATGATTATATAGAGTATATGAAATACCTAGTTATATGACGGCCACACACACGGTCCGGTCCGGTGTGTATGTAAATGTTATGATTTTTGTATTTTTATATATGATCTTTGCATTGCGAAAACAATGGAAACAA 314 19163188 0.917210258 31 301 3073 0.957783641 2.08278537 0.335092348 0.156050955 0.300791557 314 14 2 363 2R:19163168-19163354 6 ena FBtr0340450 19161687 19163705 TTGACT 6mer3-8 dme-miR-1012-3p 2R + 19163168 19163300 3'utr ena FlyBase G13277.1 AATTTAACAATAATTTATATTGACTGTGCGAGGTTGCGTCGATATATGATATATATGATTATATAGAGTATATGAAATACCTAGTTATATGACGGCCACACACACGGTCCGGTCCGGTGTGTATGTAAATGTT 84 19163188 0.785318395 16 76 671 0.928571429 1.369215857 0.388888889 0.380952381 0.587301587 84 5 4 117 2R:19163168-19163300 6 83.5 1650 FBgn0000578 7091.176667 212.0766667 326.4733333 0.011775197 0.39372554 0.255763615 -1 -1 -1 0.01 dme-miR-2a-2-5p 7mer-m1 GATGAGG 2R 19163497 19163503 + 2R_19163497_19163503_+ 0.825582373 0.825582373 0.825582373 0 ena FBtr0340450 19161687 19163705 2R + 19163370 19163539 3'utr ena FlyBase G17412.1 ACGTAAACTATTTTAAACGAAGCAAATGAAAATCGATGCGCCTTGCAGTGGGCGCAACCTTTTTATGTATTAAATTAAATATATTATACACTTATATACAACCAGAATATTCAATATACATACAAGAGATGAGGAAACGATGTAGCAGCCAGCATTGACTCGAGATCAAA 43 19163477 0.971331247 14 39 223 0.893617021 1.62324929 0.042553191 0.069767442 0.14893617 43 5 0 42 2R:19163370-19163539 7 ena FBtr0340450 19161687 19163705 GATGAGG 7mer-m1 dme-miR-2a-2-5p 2R + 19163459 19163498 3'utr ena FlyBase G13278.1 ACTTATATACAACCAGAATATTCAATATACATACAAGAGA 7 19163477 0.813790791 2 7 42 1 1.113943352 0.153846154 0.714285714 0.846153846 7 0 0 13 2R:19163459-19163498 2 3.5 1651 FBgn0000578 7091.176667 212.0766667 326.4733333 0.000493571 0.016503466 0.010720631 20 20 20 0.01 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA 2R 19226817 19226824 + 2R_19226817_19226824_+ 0.627007348 0.627007348 0.627007348 0 hppy FBtr0340454|FBtr0340456|FBtr0086504|FBtr0340455|FBtr0086503 19226138|19226138|19226138|19226138|19226138 19227193|19227193|19227193|19227193|19227193 2R + 19226762 19226838 3'utr hppy FlyBase G17434.1 GGTTAAACTGCTTTCGATTGGCTCAAAACCGCAACGGAAAATCAAGAACGAGAAATTGAAGAATGCGATATAGGATG 60 19226817 0.932200672 4 58 215 0.96969697 1.505149978 0.090909091 0.1 0.181818182 60 1 1 64 2R:19226762-19226838 8 hppy FBtr0086503|FBtr0340454|FBtr0340456|FBtr0086504|FBtr0340455 19226138|19226138|19226138|19226138|19226138 19227193|19227193|19227193|19227193|19227193 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p 2R + 19226805 19226840 3'utr hppy FlyBase G13296.1 AAGAACGAGAAATTGAAGAATGCGATATAGGATGAT 38 19226817 0.941939091 2 37 138 0.96 1.681241237 0.18 0.315789474 0.48 38 2 0 48 2R:19226805-19226840 8 46 1652 FBgn0263395 662.23 18.48666667 28.52 0.069462271 2.488279841 1.612903226 0 0 0 0.01 dme-miR-33-5p 7mer-A1 AATGCAA 2R 19226912 19226918 + 2R_19226912_19226918_+ 0.782911824 0.782911824 0.782911824 0 hppy FBtr0340454|FBtr0340456|FBtr0086504|FBtr0340455|FBtr0086503 19226138|19226138|19226138|19226138|19226138 19227193|19227193|19227193|19227193|19227193 2R + 19226893 19226934 3'utr hppy FlyBase G17435.1 ACGAATTCAAAACAAAATAAATGCAAATTAATGGTCTGTATC 10 19226924 0.973942569 3 9 55 0.923076923 1.079181246 0.076923077 0.3 0.461538462 10 1 0 12 2R:19226893-19226934 7 hppy FBtr0086503|FBtr0340454|FBtr0340456|FBtr0086504|FBtr0340455 19226138|19226138|19226138|19226138|19226138 19227193|19227193|19227193|19227193|19227193 AATGCAA 7mer-A1 dme-miR-33-5p 2R + 19226896 19227043 3'utr hppy FlyBase G13297.1 AATTCAAAACAAAATAAATGCAAATTAATGGTCTGTATCTGTATGTTAAAAAAGTAAACTGATTGTCATAGTTACGGTTCTAGGCTATAAGATAAGCGATGAAAACAGACAACTTTCCGAACAGCACATTTGTCGATTGAGTTGTATA 40 19226910 0.997036693 12 39 260 0.98 1.69019608 0.24 0.225 0.38 40 1 0 49 2R:19226896-19227043 7 10.5 1653 FBgn0263395 662.23 18.48666667 28.52 0.015855518 0.56797692 0.368162693 -12 2 -5 0.01 dme-miR-92b-3p 7mer-A1 TGCAATA 2R 19281584 19281590 - 2R_19281584_19281590_- 0.782911824 0.782911824 0.782911824 0 CG11906 FBtr0086563 19281416 19281622 2R - 19281511 19281655 stop_codon CG11906 FlyBase G24997.1 GAGCGAAATCCGAACTGCGTTGGATGTCACTGATTACGAACTTGTTGTGAGCTCCATTCTTCGTCTGCAATATATTCGAATAGGTCATGCTACACGTTACTAGTAGAGTGTAAAGTGCTAATATGCACACTCTTTGGTCGAGCAA 23 19281592 0.9858103 13 21 168 0.9375 1.176091259 0.28125 0.260869565 0.46875 23 1 1 30 2R:19281511-19281655 7 CG11906 FBtr0086563 19281416 19281622 TGCAATA 7mer-A1 dme-miR-92b-3p 2R - 19281581 19281620 3'utr CG11906 FlyBase G18913.2 ACGAACTTGTTGTGAGCTCCATTCTTCGTCTGCAATATAT 7 19281611 0.706293346 3 6 62 0.916666667 1.041392685 0.25 0.285714286 0.583333333 7 1 0 11 2R:19281581-19281620 7 6.5 1654 FBgn0034425 277.52 15.04333333 23.38333333 0.023421735 0.432085088 0.277975766 2 21 11.5 0.01 dme-miR-999-3p 8mer-A1 AGTTAACA 2R 19307854 19307861 - 2R_19307854_19307861_- 0.643926235 0.643926235 0.643926235 0 EndoB FBtr0113097|FBtr0113098|FBtr0086558|FBtr0086559 19307445|19307445|19307445|19307445 19308386|19308386|19308386|19308386 2R - 19307823 19307866 3'utr EndoB FlyBase G25011.1 ATCTTAGTTAACAAGCGAAATTCTCTGTGCTTTACTATATATCC 10 19307836 0.986357798 6 10 89 1 1.079181246 0.25 0.2 0.333333333 10 0 0 12 2R:19307823-19307866 8 EndoB FBtr0086559|FBtr0086558|FBtr0113098|FBtr0113097 19307445|19307445|19307445|19307445 19308386|19308386|19308386|19308386 AGTTAACA 8mer-A1 dme-miR-999-3p 2R - 19307821 19307874 3'utr EndoB FlyBase G18922.1 TTGTCAATATCTTAGTTAACAAGCGAAATTCTCTGTGCTTTACTATATATCCTA 6 19307838 0.985975524 4 6 56 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 2R:19307821-19307874 8 5 1655 FBgn0034433 435.3966667 24.15666667 36.94666667 0.011483781 0.2069822 0.135330206 -25 -23 -24 0.01 dme-miR-12-5p 8mer-A1 AATACTCA 2R 19308294 19308301 - 2R_19308294_19308301_- 0.643927113 0.643927113 0.643927113 0 EndoB FBtr0113097|FBtr0113098|FBtr0086558|FBtr0086559 19307445|19307445|19307445|19307445 19308386|19308386|19308386|19308386 2R - 19308283 19308315 3'utr EndoB FlyBase G25012.1 ACTCCAAGTACGGCAATACTCATATGTTAAGAA 6 19308299 0.948809333 3 5 26 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2R:19308283-19308315 8 EndoB FBtr0086559|FBtr0086558|FBtr0113098|FBtr0113097 19307445|19307445|19307445|19307445 19308386|19308386|19308386|19308386 AATACTCA 8mer-A1 dme-miR-12-5p 2R - 19308232 19308312 3'utr EndoB FlyBase G18923.1 CCAAGTACGGCAATACTCATATGTTAAGAAAGCAGACACGATCGAGAGAAGGGAACGGCAATTGGACAATTAAAGGATGCG 11 19308290 0.940412771 5 11 44 1 1.113943352 0.076923077 0.181818182 0.307692308 11 0 0 13 2R:19308232-19308312 8 6.5 1656 FBgn0034433 435.3966667 24.15666667 36.94666667 0.014928915 0.269076859 0.175929267 -2 -11 -6.5 0.01 dme-miR-1012-3p 7mer-m8 TTGACTA 2R 19392027 19392033 - 2R_19392027_19392033_- 0.631525719 0.579713836 0.605619777 0.036636546 SdhA FBtr0086553|FBtr0086552|FBtr0086554 19391861|19391861|19391861 19392398|19392398|19392398 2R - 19391998 19392071 3'utr SdhA FlyBase G25031.1 TGTGTGTGAGTAGACAACGAGTTAGGTCTGAGGCGATATTGACTACGCAGCCTGTTTAGAAGCAAATGAAAACA 21 19392016 0.773642721 8 21 97 1 1.431363764 0.296296296 0.285714286 0.444444444 21 0 0 27 2R:19391998-19392071 7 SdhA FBtr0086553|FBtr0086552|FBtr0086554 19391861|19391861|19391861 19392398|19392398|19392398 TTGACTA 7mer-m8 dme-miR-1012-3p 2R - 19392001 19392064 3'utr SdhA FlyBase G18933.1 GAGTAGACAACGAGTTAGGTCTGAGGCGATATTGACTACGCAGCCTGTTTAGAAGCAAATGAAA 12 19392016 0.96266556 4 12 57 1 1.322219295 0.333333333 0.666666667 0.80952381 12 0 0 21 2R:19392001-19392064 7 7 1657 FBgn0261439 831.86 37.47666667 57.27666667 0.008414878 0.186782887 0.122213816 -17 -17 -17 0.01 dme-miR-11-3p 7mer-m1 TGTGATG 2R 19392219 19392225 - 2R_19392219_19392225_- 0.612071121 0.612071121 0.612071121 0 SdhA FBtr0086553|FBtr0086552|FBtr0086554 19391861|19391861|19391861 19392398|19392398|19392398 2R - 19392214 19392246 3'utr SdhA FlyBase G25033.1 CGGCAGCGGTTCCGGGCATTTTGTGATGAAACG 8 19392226 0.6701727 2 8 54 1 0.903089987 0.25 0 0 8 0 0 8 2R:19392214-19392246 7 SdhA FBtr0086553|FBtr0086552|FBtr0086554 19391861|19391861|19391861 19392398|19392398|19392398 TGTGATG 7mer-m1 dme-miR-11-3p 2R - 19392214 19392242 3'utr SdhA FlyBase G18934.1 AGCGGTTCCGGGCATTTTGTGATGAAACG 6 19392227 0.698667055 3 6 39 1 0.77815125 0.166666667 0 0 6 0 0 6 2R:19392214-19392242 7 7 1658 FBgn0261439 831.86 37.47666667 57.27666667 0.008414878 0.186782887 0.122213816 1 2 1.5 0.01 dme-miR-283-5p 7mer-m8 TGATATT 2R 19397993 19397999 - 2R_19397993_19397999_- 0.620203677 0.620203677 0.620203677 0 hts FBtr0309114|FBtr0340491|FBtr0309110|FBtr0309115|FBtr0309112|FBtr0309109 19397333|19397030|19397333|19397030|19397030|19397333 19398691|19398691|19398691|19398691|19398691|19398691 2R - 19397960 19398019 3'utr hts FlyBase G25053.2 CGATGACAACAACTACAATTTGATATTCTAGGCATGTGTGTGTTTTGTGAAAGCGCGTTT 14 19398000 0.723602945 7 12 127 1 1.146128036 0.142857143 0 0 14 0 0 14 2R:19397960-19398019 7 hts FBtr0309112|FBtr0309109|FBtr0309110|FBtr0309115|FBtr0309114|FBtr0340491 19397030|19397333|19397333|19397030|19397333|19397030 19398691|19398691|19398691|19398691|19398691|19398691 TGATATT 7mer-m8 dme-miR-283-5p 2R - 19397967 19398011 3'utr hts FlyBase G18943.1 ACAACTACAATTTGATATTCTAGGCATGTGTGTGTTTTGTGAAAG 7 19397978 0.707019448 5 6 65 0.857142857 0.77815125 0 0 0 7 1 0 6 2R:19397967-19398011 7 8.5 1659 FBgn0263391 2797.676667 82.51666667 126.2733333 0.003038235 0.103009493 0.067314292 1 -21 -10 0.01 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 2R 19430692 19430697 - 2R_19430692_19430697_- 1 0.999999954 0.999999977 0 Fak FBtr0301883|FBtr0086542|FBtr0301882|FBtr0114605|FBtr0086543|FBtr0086544 19430657|19430657|19430657|19430657|19430657|19430657 19431105|19431105|19431105|19431105|19431105|19431105 2R - 19430669 19430712 3'utr Fak FlyBase G25076.1 CGAAGCTAATTATTTTGGTGCAAGGTTCAATCACAAAAAATAAA 6 19430698 0.986234677 4 6 48 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 2R:19430669-19430712 6 Fak FBtr0086543|FBtr0086544|FBtr0301882|FBtr0114605|FBtr0301883|FBtr0086542 19430657|19430657|19430657|19430657|19430657|19430657 19431105|19431105|19431105|19431105|19431105|19431105 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 2R - 19430676 19430713 3'utr Fak FlyBase G18957.1 TCGAAGCTAATTATTTTGGTGCAAGGTTCAATCACAAA 7 19430697 0.801824257 2 7 60 1 1 0.2 0.428571429 0.6 7 0 0 10 2R:19430676-19430713 6 6 1660 FBgn0020440 860.4633333 21.11 32.3 0.006972987 0.284225486 0.185758514 1 0 0.5 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2R 19430739 19430745 - 2R_19430739_19430745_- 0.521223855 0.521223855 0.521223855 0 Fak FBtr0301883|FBtr0086542|FBtr0301882|FBtr0114605|FBtr0086543|FBtr0086544 19430657|19430657|19430657|19430657|19430657|19430657 19431105|19431105|19431105|19431105|19431105|19431105 2R - 19430726 19430783 3'utr Fak FlyBase G25077.1 TTCATCATCAATTCGGGTGTGTTTTAAGACATTTATATTGTGATTTATAGTTTACCAT 28 19430746 0.714967241 10 27 306 0.971428571 1.531478917 0.171428571 0.214285714 0.371428571 28 1 0 34 2R:19430726-19430783 7 Fak FBtr0086543|FBtr0086544|FBtr0301882|FBtr0114605|FBtr0301883|FBtr0086542 19430657|19430657|19430657|19430657|19430657|19430657 19431105|19431105|19431105|19431105|19431105|19431105 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 19430718 19430758 3'utr Fak FlyBase G18958.1 AAGACATTTATATTGTGATTTATAGTTTACCATTATAGGCT 20 19430747 0.587276912 8 18 239 0.923076923 1.079181246 0.230769231 0.2 0.384615385 20 1 1 24 2R:19430718-19430758 7 22.5 1661 FBgn0020440 860.4633333 21.11 32.3 0.026148703 1.065845571 0.696594427 1 2 1.5 0.01 dme-miR-2b-2-5p 7mer-m8 TTGAAGA 2R 19430842 19430848 - 2R_19430842_19430848_- 0.631525999 0.631525999 0.631525999 0 Fak FBtr0301883|FBtr0086542|FBtr0301882|FBtr0114605|FBtr0086543|FBtr0086544 19430657|19430657|19430657|19430657|19430657|19430657 19431105|19431105|19431105|19431105|19431105|19431105 2R - 19430797 19430924 3'utr Fak FlyBase G25078.1 GACCCCAACTCGGCCGGCCGCATTCTCACATCGTCATGTAGTCAAAATAATTTAAGAAACAAAGACACGTTTTTGATTGAAGATGGCTAGTAATAGTAATTTATAGATAATCTACTCGATCTAATACA 28 19430841 0.98434722 14 25 200 0.9375 1.176091259 0.28125 0.142857143 0.25 28 1 1 30 2R:19430797-19430924 7 Fak FBtr0086543|FBtr0086544|FBtr0301882|FBtr0114605|FBtr0301883|FBtr0086542 19430657|19430657|19430657|19430657|19430657|19430657 19431105|19431105|19431105|19431105|19431105|19431105 TTGAAGA 7mer-m8 dme-miR-2b-2-5p 2R - 19430794 19430935 3'utr Fak FlyBase G18959.1 AAGTTTGACGAGACCCCAACTCGGCCGGCCGCATTCTCACATCGTCATGTAGTCAAAATAATTTAAGAAACAAAGACACGTTTTTGATTGAAGATGGCTAGTAATAGTAATTTATAGATAATCTACTCGATCTAATACAACT 22 19430842 0.98157243 15 21 109 0.973684211 1.568201724 0.315789474 0.545454545 0.736842105 22 1 0 37 2R:19430794-19430935 7 9.5 1662 FBgn0020440 860.4633333 21.11 32.3 0.011040563 0.450023685 0.294117647 -7 -6 -6.5 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 2R 19482264 19482269 + 2R_19482264_19482269_+ 1 1 1 0 par-1 FBtr0100390|FBtr0301506|FBtr0086457|FBtr0301505 19481162|19481162|19481162|19481162 19482575|19482575|19482575|19482575 2R + 19482252 19482292 3'utr par-1 FlyBase G17628.1 CCCAGAAGCCAGATGTGCAGCGTATCTAGTAATTAAGCATA 12 19482266 0.979182934 2 10 73 0.785714286 0.740362689 0 0.166666667 0.285714286 12 2 1 11 2R:19482252-19482292 6 par-1 FBtr0301505|FBtr0301506|FBtr0100390|FBtr0086457 19481162|19481162|19481162|19481162 19482575|19482575|19482575|19482575 ATGTGC 6mer3-8 dme-miR-305-3p 2R + 19482238 19482290 3'utr par-1 FlyBase G13422.1 GCAATTCATAATCACCCAGAAGCCAGATGTGCAGCGTATCTAGTAATTAAGCA 7 19482265 0.960201912 3 6 33 1 1.146128036 0.071428571 0.571428571 0.785714286 7 0 0 14 2R:19482238-19482290 6 8.5 1663 FBgn0260934 5641.8 137.7133333 211.53 0.001506611 0.061722419 0.040183426 -2 -1 -1.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 19483412 19483417 + 2R_19483412_19483417_+ 1 1 1 0 par-1 FBtr0301503|FBtr0086450|FBtr0330244 19483406|19483406|19483406 19484473|19484473|19485686 2R + 19483380 19483416 stop_codon par-1 FlyBase G17632.1 GCGCATTGCTTTTGACCTCAAGCTGTGACTTAACCAA 8 19483409 0.805572456 3 7 52 0.9 0.954242509 0 0.125 0.3 8 1 0 9 2R:19483380-19483416 5 par-1 FBtr0086450|FBtr0301503|FBtr0330244 19483406|19483406|19483406 19484473|19484473|19485686 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 19483375 19483454 stop_codon par-1 FlyBase G13423.1 GCGTCGCGCATTGCTTTTGACCTCAAGCTGTGACTTAACCAAACGAACAACGAGGGGAATGCGGCCGCCACCGCCTCGCG 8 19483409 0.955974238 5 7 38 1 0.954242509 0.333333333 0.125 0.222222222 8 0 0 9 2R:19483375-19483454 6 5 1664 FBgn0260934 5641.8 137.7133333 211.53 0.000886242 0.036307305 0.023637309 3 3 3 0.01 dme-miR-33-5p 6mer3-8 CAATGC 2R 19484165 19484170 + 2R_19484165_19484170_+ 1 1 1 0 par-1 FBtr0301503|FBtr0086450|FBtr0330244|FBtr0330245 19483406|19483406|19483406|19484102 19484473|19484473|19485686|19484473 2R + 19484158 19484198 3'utr par-1 FlyBase G17635.1 ATGAAGGCAATGCGGCGAATACCCTGCTGGAATCTCAAGAA 14 19484184 0.728821813 4 10 57 0.6875 1.041392685 0.3125 0.142857143 0.25 14 5 0 11 2R:19484158-19484198 6 par-1 FBtr0330245|FBtr0086450|FBtr0301503|FBtr0330244 19484102|19483406|19483406|19483406 19484473|19484473|19484473|19485686 CAATGC 6mer3-8 dme-miR-33-5p 2R + 19484162 19484215 3'utr par-1 FlyBase G13424.1 AGGCAATGCGGCGAATACCCTGCTGGAATCTCAAGAAATAATTAATGTTAGCAT 11 19484178 0.725549951 7 10 51 0.909090909 1 0.181818182 0 0 11 1 0 10 2R:19484162-19484215 6 7 1665 FBgn0260934 5641.8 137.7133333 211.53 0.001240739 0.050830227 0.033092233 -19 -13 -16 0.01 dme-miR-980-3p 6mer2-7 GCAGCT 2R 19484384 19484389 + 2R_19484384_19484389_+ 1 1 1 0 par-1 FBtr0301503|FBtr0086450|FBtr0330244|FBtr0330245 19483406|19483406|19483406|19484102 19484473|19484473|19485686|19484473 2R + 19484369 19484403 3'utr par-1 FlyBase G17636.1 AATATATGTCATCGCGCAGCTTGCAAGATGGAACA 13 19484389 0.755320292 4 10 55 0.882352941 1.176091259 0.529411765 0.230769231 0.411764706 13 2 0 15 2R:19484369-19484403 6 par-1 FBtr0330245|FBtr0086450|FBtr0301503|FBtr0330244 19484102|19483406|19483406|19483406 19484473|19484473|19484473|19485686 GCAGCT 6mer2-7 dme-miR-980-3p 2R + 19484374 19484438 3'utr par-1 FlyBase G13426.1 ATGTCATCGCGCAGCTTGCAAGATGGAACAGAAGTGAATATATAAGGGTAACAAACACACCACTC 14 19484390 0.949737284 4 13 58 0.909090909 0.823908741 0.363636364 0.5 0.681818182 14 0 2 20 2R:19484374-19484438 6 10.5 1666 FBgn0260934 5641.8 137.7133333 211.53 0.001861108 0.076245341 0.049638349 -5 -6 -5.5 0.01 dme-miR-282-5p 6mer2-7 GAGGCT 2R 19485069 19485074 + 2R_19485069_19485074_+ 1 1 1 0 par-1 FBtr0330244 19483406 19485686 2R + 19484995 19485139 3'utr par-1 FlyBase G17637.1 AAAACATACCTTAGGGAGGAGCGATCTCAAGTGAGATGTAGAAAAGAAAAAGACGACCATTTATCTAAGTTGTGGAGGCTCAAAAAACAGTCTATATATATATACCAAAACATATACAAAGTTGCACATCAAGTTGTCTTCATCA 114 19485067 0.80210614 11 113 519 1 2.139879086 0.028985507 0.192982456 0.333333333 114 0 0 138 2R:19484995-19485139 6 par-1 FBtr0330244 19483406 19485686 GAGGCT 6mer2-7 dme-miR-282-5p 2R + 19485042 19485109 3'utr par-1 FlyBase G13427.2 AAAAGACGACCATTTATCTAAGTTGTGGAGGCTCAAAAAACAGTCTATATATATATACCAAAACATAT 100 19485067 0.950925639 3 99 431 0.992907801 2.146128036 0 0.33 0.524822695 100 1 0 140 2R:19485042-19485109 6 96.5 1667 FBgn0260934 5641.8 137.7133333 211.53 0.01710447 0.700730987 0.456200066 2 2 2 0.01 dme-miR-317-3p 6mer2-7 GTGTTC 2R 19485562 19485567 - 2R_19485562_19485567_- 1 1 1 0 TBCB FBtr0086502 19485492 19485802 2R - 19485554 19485603 3'utr TBCB FlyBase G25102.1 AATTCTATAATCGGCTTTATCATAACTGATTTAATGGTGTTCTCAATCAT 36 19485569 0.786405796 8 36 360 1 1.612783857 0.170731707 0.083333333 0.195121951 36 0 0 41 2R:19485554-19485603 6 TBCB FBtr0086502 19485492 19485802 GTGTTC 6mer2-7 dme-miR-317-3p 2R - 19485554 19485606 3'utr TBCB FlyBase G18982.1 GTAAATTCTATAATCGGCTTTATCATAACTGATTTAATGGTGTTCTCAATCAT 21 19485569 0.80556756 6 20 206 0.965517241 1.447158031 0.206896552 0.285714286 0.482758621 21 1 0 28 2R:19485554-19485606 6 24 1668 FBgn0034451 695.71 73.74666667 112.8533333 0.034497132 0.325438438 0.212665406 2 2 2 0.01 dme-miR-283-5p 6mer3-8 TGATAT 2R 19485631 19485636 + 2R_19485631_19485636_+ 1 1 1 0 par-1 FBtr0330244 19483406 19485686 2R + 19485611 19485671 3'utr par-1 FlyBase G17639.1 AATCATGTTGTAAGAATATCTGATATACATACATACATAGATGTTTTAATTAATAAATAAA 5 19485634 0.96577454 3 5 37 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 2R:19485611-19485671 6 par-1 FBtr0330244 19483406 19485686 TGATAT 6mer3-8 dme-miR-283-5p 2R + 19485607 19485647 3'utr par-1 FlyBase G13429.1 GAATAATCATGTTGTAAGAATATCTGATATACATACATACA 12 19485634 0.756985156 5 12 79 1 1.301029996 0.1 0.583333333 0.75 12 0 0 20 2R:19485607-19485647 6 7 1669 FBgn0260934 5641.8 137.7133333 211.53 0.001240739 0.050830227 0.033092233 -3 -3 -3 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2R 19485734 19485739 - 2R_19485734_19485739_- 1 1 1 0 TBCB FBtr0086502 19485492 19485802 2R - 19485648 19485785 3'utr TBCB FlyBase G25103.1 ACACACAGGTCACACAATCTCGCATCGCACATGCCACCTTAAACAGAAGACTTACGAACCGCTAAAACTATTTGTACGCATGAAAGAACATTACAAATTATAGTTATGCCATTTTTTATTTATTAATTAAAACATCTA 65 19485747 0.970363389 19 52 310 0.825 1.120573931 0.0875 0.215384615 0.3625 65 10 4 66 2R:19485648-19485785 6 TBCB FBtr0086502 19485492 19485802 AAGACT 6mer3-8 dme-miR-14-3p 2R - 19485700 19485782 3'utr TBCB FlyBase G18983.1 CACAGGTCACACAATCTCGCATCGCACATGCCACCTTAAACAGAAGACTTACGAACCGCTAAAACTATTTGTACGCATGAAAG 27 19485747 0.948789915 6 24 103 0.902439024 1.568201724 0.024390244 0.37037037 0.585365854 27 4 0 37 2R:19485700-19485782 6 25 1670 FBgn0034451 695.71 73.74666667 112.8533333 0.035934513 0.338998373 0.221526465 8 8 8 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 2R 19494075 19494081 + 2R_19494075_19494081_+ 0.620204266 0.620204266 0.620204266 0 Rep FBtr0086462 19493874 19494125 2R + 19494052 19494090 3'utr Rep FlyBase G17649.1 ATGTTTAAATGTGAGTGTTTCTGTGCATTTTGCTTTGAT 9 19494081 0.966513053 5 9 88 1 1.041392685 0.272727273 0.111111111 0.272727273 9 0 0 11 2R:19494052-19494090 7 Rep FBtr0086462 19493874 19494125 TGCATTT 7mer-m8 dme-miR-277-3p 2R + 19494053 19494093 3'utr Rep FlyBase G13436.1 TGTTTAAATGTGAGTGTTTCTGTGCATTTTGCTTTGATAAA 5 19494069 0.974675023 5 5 57 1 0.903089987 0.125 0.4 0.625 5 0 0 8 2R:19494053-19494093 7 6 1671 FBgn0026378 268.7033333 16.93666667 25.81 0.022329459 0.354260972 0.232468036 -6 6 0 0.01 dme-bantam-3p 6mer3-8 TGATCT 2R 19494350 19494355 - 2R_19494350_19494355_- 1 1 1 0 hpo FBtr0331920|FBtr0086500 19493994|19494295 19494681|19494681 2R - 19494323 19494379 3'utr hpo FlyBase G25107.1 GGTTTCTTATATCCTAGCTTTCATTGATCTGTCTTTTAATATAAATAGGTATGCTCG 169 19494355 0.809692525 8 161 2042 0.958549223 1.790050474 0.015544041 0.130177515 0.238341969 169 6 2 185 2R:19494323-19494379 6 hpo FBtr0331920|FBtr0086500 19493994|19494295 19494681|19494681 TGATCT 6mer3-8 dme-bantam-3p 2R - 19494327 19494380 3'utr hpo FlyBase G18987.1 TGGTTTCTTATATCCTAGCTTTCATTGATCTGTCTTTTAATATAAATAGGTATG 85 19494355 0.779552891 12 79 990 0.93495935 1.759667845 0.024390244 0.317647059 0.528455285 85 7 1 115 2R:19494327-19494380 6 125 1672 FBgn0261456 615.7733333 26.58 40.65333333 0.202996774 4.702784048 3.074778616 0 0 0 0.01 dme-miR-263a-5p 7mer-m8 GTGCCAT 2R 19504023 19504029 + 2R_19504023_19504029_+ 0.659000065 0.659000077 0.659000071 0 CG11007 FBtr0086464|FBtr0345929 19504002|19504002 19504268|19504594 2R + 19504010 19504066 3'utr CG11007 FlyBase G17652.1 CTGTCCACCACTGGTGCCATCTCATTTCTGCGTGCACGTGCTAATAACTGTTATTCG 11 19504022 0.965188487 9 10 79 0.923076923 1.079181246 0.153846154 0.090909091 0.230769231 11 1 0 12 2R:19504010-19504066 7 CG11007 FBtr0345929|FBtr0086464 19504002|19504002 19504594|19504268 GTGCCAT 7mer-m8 dme-miR-263a-5p 2R + 19504009 19504057 3'utr CG11007 FlyBase G13437.1 CCTGTCCACCACTGGTGCCATCTCATTTCTGCGTGCACGTGCTAATAAC 5 19504035 0.98888547 4 4 33 0.833333333 0.698970004 0.166666667 0.2 0.333333333 5 1 0 5 2R:19504009-19504057 7 3 1673 FBgn0034455 282.3433333 27.99666667 42.39333333 0.010625362 0.107155614 0.070765844 1 -12 -5.5 0.01 dme-miR-8-3p 7mer-m8 CAGTATT 2R 19665393 19665399 - 2R_19665393_19665399_- 0.661615243 0.661615243 0.661615243 0 hrg FBtr0111010 19665258 19666023 2R - 19665347 19665419 3'utr hrg FlyBase G25135.1 ACTTTTACGTATTCTATAACCAGTATTCCGCCAATGTGGAAACAATCTAACAAAAACATACCTCTAATTTTTT 13 19665394 0.983287683 8 12 92 0.9375 1.176091259 0 0.230769231 0.375 13 1 0 15 2R:19665347-19665419 7 hrg FBtr0111010 19665258 19666023 CAGTATT 7mer-m8 dme-miR-8-3p 2R - 19665337 19665403 3'utr hrg FlyBase G19008.1 TAACCAGTATTCCGCCAATGTGGAAACAATCTAACAAAAACATACCTCTAATTTTTTAAGTTTTAAA 6 19665385 0.95826897 4 6 33 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 2R:19665337-19665403 7 7.5 1674 FBgn0015949 2895.236667 92.73333333 142.2466667 0.002590462 0.080877067 0.052725313 -5 -14 -9.5 0.01 dme-miR-14-3p 6mer2-7 AGACTG 2R 19665450 19665455 - 2R_19665450_19665455_- 0.987627523 0.99199017 0.989808847 0.003084895 hrg FBtr0111010 19665258 19666023 2R - 19665429 19665505 3'utr hrg FlyBase G25136.1 TTCCTCGTTATCGTACTCTCTTTTCATTTTCCCCAACTTCCTTTGACACGAGACTGTTTCTGTACTCTTAAGTTGCC 144 19665448 0.672721724 18 137 1319 0.949438202 1.625826713 0.02247191 0.201388889 0.353932584 144 6 3 169 2R:19665429-19665505 6 hrg FBtr0111010 19665258 19666023 AGACTG 6mer2-7 dme-miR-14-3p 2R - 19665414 19665509 3'utr hrg FlyBase G19009.1 GTTTTTCCTCGTTATCGTACTCTCTTTTCATTTTCCCCAACTTCCTTTGACACGAGACTGTTTCTGTACTCTTAAGTTGCCTATCTACTTACTTTT 95 19665448 0.984980435 16 89 887 0.944055944 1.653212514 0.041958042 0.410526316 0.608391608 95 6 2 135 2R:19665414-19665509 6 104.5 1675 FBgn0015949 2895.236667 92.73333333 142.2466667 0.036093768 1.126887132 0.734639359 -7 -7 -7 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA 2R 19665677 19665682 - 2R_19665677_19665682_- 1 1 1 0 hrg FBtr0086484|FBtr0086483|FBtr0111010 19663917|19663917|19665258 19666023|19666023|19666023 2R - 19665634 19665726 3'utr hrg FlyBase G25138.1 AACGGCGGTGGCGGCGGCAGCCACTACAACAAAACGTACTACATTGATGATGATGACGAGGACAACAATCAACCACTTTTGACACCTAACAAC 48 19665683 0.718161014 8 47 240 0.980769231 1.707570176 0.057692308 0.083333333 0.153846154 48 1 0 51 2R:19665634-19665726 6 hrg FBtr0111010|FBtr0086484|FBtr0086483 19665258|19663917|19663917 19666023|19666023|19666023 TGATGA 6mer3-8 dme-miR-2a-2-5p 2R - 19665659 19665702 3'utr hrg FlyBase G19010.1 TACAACAAAACGTACTACATTGATGATGATGACGAGGACAACAA 14 19665683 0.956381414 4 14 69 1 1.397940009 0.08 0.642857143 0.8 14 0 0 25 2R:19665659-19665702 6 28 1676 FBgn0015949 2895.236667 92.73333333 142.2466667 0.009671057 0.30194105 0.196841168 1 1 1 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 2R 19672899 19672904 + 2R_19672899_19672904_+ 1 1 1 0 isopeptidase-T-3 FBtr0330247|FBtr0086473|FBtr0086474 19672808|19672808|19672808 19673477|19673477|19673175 2R + 19672875 19672918 3'utr isopeptidase-T-3 FlyBase G17657.1 TCACACACCCGAAGTGCATGGCTGTAGCTTGGTCCATTTTGGGG 9 19672893 0.977757846 3 8 58 0.909090909 1 0.272727273 0.222222222 0.363636364 9 1 0 10 2R:19672875-19672918 6 isopeptidase-T-3 FBtr0330247|FBtr0086473|FBtr0086474 19672808|19672808|19672808 19673477|19673477|19673175 TAGCTT 6mer3-8 dme-miR-79-3p 2R + 19672873 19672910 3'utr isopeptidase-T-3 FlyBase G13442.1 AATCACACACCCGAAGTGCATGGCTGTAGCTTGGTCCA 6 19672893 0.962992376 3 6 29 1 1.041392685 0.272727273 0.5 0.727272727 6 0 0 11 2R:19672873-19672910 6 7.5 1677 FBgn0028372 205.4433333 10.11 15.41666667 0.036506417 0.741839763 0.486486486 6 6 6 0.01 dme-miR-1006-3p 6mer3-8 CGAATT 2R 19673064 19673069 + 2R_19673064_19673069_+ 0.507200502 0.507200502 0.507200502 0 isopeptidase-T-3 FBtr0330247|FBtr0086473|FBtr0086474 19672808|19672808|19672808 19673477|19673477|19673175 2R + 19673022 19673090 3'utr isopeptidase-T-3 FlyBase G17658.1 AAGAGCACGCGGCTGCACTCTACAAACGCTTACCGATCAGTACGAATTGCATTTTATACATACATATAC 70 19673058 0.938364935 6 68 371 0.967032967 1.944482672 0.241758242 0.257142857 0.428571429 70 3 0 88 2R:19673022-19673090 6 isopeptidase-T-3 FBtr0330247|FBtr0086473|FBtr0086474 19672808|19672808|19672808 19673477|19673477|19673175 CGAATT 6mer3-8 dme-miR-1006-3p 2R + 19673024 19673079 3'utr isopeptidase-T-3 FlyBase G13443.1 GAGCACGCGGCTGCACTCTACAAACGCTTACCGATCAGTACGAATTGCATTTTATA 30 19673058 0.96641962 4 29 152 0.978723404 1.361727836 0.340425532 0.3 0.553191489 30 0 1 46 2R:19673024-19673079 6 46.5 1678 FBgn0028372 205.4433333 10.11 15.41666667 0.226339786 4.599406528 3.016216216 6 6 6 0.01 dme-miR-8-3p 7mer-A1 AGTATTA 2R 19673396 19673402 + 2R_19673396_19673402_+ 0.823349562 0.823349562 0.823349562 0 isopeptidase-T-3 FBtr0330247|FBtr0086473 19672808|19672808 19673477|19673477 2R + 19673373 19673415 3'utr isopeptidase-T-3 FlyBase G17661.1 TTAAACCATCAACTTGAACTCAAAGTATTATTTTGTAAACCAA 69 19673386 0.746401271 8 68 323 0.961538462 1.875061263 0.256410256 0.101449275 0.205128205 69 3 0 75 2R:19673373-19673415 7 isopeptidase-T-3 FBtr0330247|FBtr0086473 19672808|19672808 19673477|19673477 AGTATTA 7mer-A1 dme-miR-8-3p 2R + 19673373 19673414 3'utr isopeptidase-T-3 FlyBase G13445.1 TTAAACCATCAACTTGAACTCAAAGTATTATTTTGTAAACCA 56 19673386 0.751416925 7 51 297 0.9375 1.875061263 0.2 0.285714286 0.5 56 5 0 75 2R:19673373-19673414 7 62 1679 FBgn0028372 205.4433333 10.11 15.41666667 0.301786381 6.132542038 4.021621622 10 10 10 0.01 dme-miR-12-5p 7mer-A1 ATACTCA 2R 20261272 20261278 + 2R_20261272_20261278_+ 0.823349562 0.823349562 0.823349562 0 Hsl FBtr0086270|FBtr0086271|FBtr0086272 20260958|20260958|20260958 20261726|20261726|20261726 2R + 20261240 20261354 3'utr Hsl FlyBase G17690.1 AATTTTATATGACACAGCTTTCTATGTTTTATATACTCACAAACTAAGTATAGGATACGTATGTATGTAGCTTCTAGCATAAGCAAGCCAAGTATGCAAGTATTGGAAGCGTGTA 33 20261267 0.895440853 15 32 291 0.976744186 1.62324929 0.139534884 0.272727273 0.441860465 33 1 0 42 2R:20261240-20261354 7 Hsl FBtr0086272|FBtr0086270|FBtr0086271 20260958|20260958|20260958 20261726|20261726|20261726 ATACTCA 7mer-A1 dme-miR-12-5p 2R + 20261244 20261284 3'utr Hsl FlyBase G13466.2 TTATATGACACAGCTTTCTATGTTTTATATACTCACAAACT 9 20261266 0.635329449 7 8 87 0.928571429 1.113943352 0.071428571 0.444444444 0.642857143 9 1 0 13 2R:20261244-20261284 7 9 1680 FBgn0034491 654.3266667 22.12333333 33.89333333 0.013754598 0.406810306 0.265538946 5 6 5.5 0.01 dme-miR-33-5p 6mer2-7 AATGCA 2R 20261402 20261407 + 2R_20261402_20261407_+ 1 1 1 0 Hsl FBtr0086270|FBtr0086271|FBtr0086272 20260958|20260958|20260958 20261726|20261726|20261726 2R + 20261386 20261644 3'utr Hsl FlyBase G17691.1 ACGATTAATGCTCTTGAATGCAGGCACACACTCGCTTAAAGCTCTTTGTTGCAAAACTCCCGACTATGTGCCTCATACGGAACGAGTACTTATACACAGTGAATAGAATAATCGCCCATTATTACCCTTGATTTAGAACTCCCCAATGGTATGTCCAGATTTTCTGCAGCTGCGGAGGCTAACAAACTTCAATGTCGGAGATATGCCAAGGTTTTTTGTCTATCCCACGCCAAGGTGTTTGATAAACCACTACTCTTAA 64 20261401 0.813340494 29 59 388 0.935064935 1.380211242 0.233766234 0.125 0.272727273 64 3 2 72 2R:20261386-20261644 6 Hsl FBtr0086272|FBtr0086270|FBtr0086271 20260958|20260958|20260958 20261726|20261726|20261726 AATGCA 6mer2-7 dme-miR-33-5p 2R + 20261375 20261414 3'utr Hsl FlyBase G13468.1 TGTATTTACATACGATTAATGCTCTTGAATGCAGGCACAC 7 20261396 0.967624036 5 7 38 1 1.113943352 0.153846154 0.285714286 0.615384615 7 0 0 13 2R:20261375-20261414 6 7.5 1681 FBgn0034491 654.3266667 22.12333333 33.89333333 0.011462165 0.339008588 0.221282455 1 6 3.5 0.01 dme-miR-305-3p 7mer-m8 ATGTGCC 2R 20261451 20261457 + 2R_20261451_20261457_+ 0.674515655 0.674515655 0.674515655 0 Hsl FBtr0086270|FBtr0086271|FBtr0086272 20260958|20260958|20260958 20261726|20261726|20261726 2R + 20261386 20261644 3'utr Hsl FlyBase G17691.1 ACGATTAATGCTCTTGAATGCAGGCACACACTCGCTTAAAGCTCTTTGTTGCAAAACTCCCGACTATGTGCCTCATACGGAACGAGTACTTATACACAGTGAATAGAATAATCGCCCATTATTACCCTTGATTTAGAACTCCCCAATGGTATGTCCAGATTTTCTGCAGCTGCGGAGGCTAACAAACTTCAATGTCGGAGATATGCCAAGGTTTTTTGTCTATCCCACGCCAAGGTGTTTGATAAACCACTACTCTTAA 64 20261452 0.813340494 29 59 388 0.935064935 1.380211242 0.233766234 0.125 0.272727273 64 3 2 72 2R:20261386-20261644 7 Hsl FBtr0086272|FBtr0086270|FBtr0086271 20260958|20260958|20260958 20261726|20261726|20261726 ATGTGCC 7mer-m8 dme-miR-305-3p 2R + 20261424 20261460 3'utr Hsl FlyBase G13469.1 AAGCTCTTTGTTGCAAAACTCCCGACTATGTGCCTCA 5 20261452 0.884878499 2 5 28 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2R:20261424-20261460 7 7 1682 FBgn0034491 654.3266667 22.12333333 33.89333333 0.01069802 0.316408016 0.206530291 -1 -1 -1 0.01 dme-miR-980-3p 6mer2-7 GCAGCT 2R 20261551 20261556 + 2R_20261551_20261556_+ 1 1 1 0 Hsl FBtr0086270|FBtr0086271|FBtr0086272 20260958|20260958|20260958 20261726|20261726|20261726 2R + 20261386 20261644 3'utr Hsl FlyBase G17691.1 ACGATTAATGCTCTTGAATGCAGGCACACACTCGCTTAAAGCTCTTTGTTGCAAAACTCCCGACTATGTGCCTCATACGGAACGAGTACTTATACACAGTGAATAGAATAATCGCCCATTATTACCCTTGATTTAGAACTCCCCAATGGTATGTCCAGATTTTCTGCAGCTGCGGAGGCTAACAAACTTCAATGTCGGAGATATGCCAAGGTTTTTTGTCTATCCCACGCCAAGGTGTTTGATAAACCACTACTCTTAA 64 20261549 0.813340494 29 59 388 0.935064935 1.380211242 0.233766234 0.125 0.272727273 64 3 2 72 2R:20261386-20261644 6 Hsl FBtr0086272|FBtr0086270|FBtr0086271 20260958|20260958|20260958 20261726|20261726|20261726 GCAGCT 6mer2-7 dme-miR-980-3p 2R + 20261479 20261573 3'utr Hsl FlyBase G13470.1 ACACAGTGAATAGAATAATCGCCCATTATTACCCTTGATTTAGAACTCCCCAATGGTATGTCCAGATTTTCTGCAGCTGCGGAGGCTAACAAACT 23 20261532 0.977059728 9 22 143 0.967741935 1.477121255 0.258064516 0.260869565 0.451612903 23 1 0 30 2R:20261479-20261573 6 13.5 1683 FBgn0034491 654.3266667 22.12333333 33.89333333 0.020631896 0.610215459 0.398308419 2 19 10.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 20270862 20270867 + 2R_20270862_20270867_+ 0.999999957 1 0.999999979 0 CG8908 FBtr0339542|FBtr0339542|FBtr0339542 20270784|20270784|20270784 20270994|20270994|20270994 2R + 20270836 20270881 3'utr CG8908 FlyBase G17697.1 AACCCTTATCGTATCAGCGAAACTATCTGTGAAAGCTTTGCTTCCG 10 20270861 0.983664445 3 9 73 0.818181818 0.954242509 0.181818182 0.1 0.181818182 10 2 0 9 2R:20270836-20270881 6 CG8908 FBtr0339542|FBtr0339542|FBtr0339542 20270784|20270784|20270784 20270994|20270994|20270994 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 20270851 20270875 3'utr CG8908 FlyBase G13478.1 AGCGAAACTATCTGTGAAAGCTTTG 5 20270861 0.873066299 2 4 22 0.666666667 0.602059991 0.5 0.2 0.333333333 5 2 0 4 2R:20270851-20270875 6 7.5 1684 FBgn0034493 153.9366667 3.596666667 5.44 0.048721336 2.085264133 1.378676471 1 1 1 0.01 dme-miR-12-5p 6mer2-7 ATACTC 2R 20270957 20270962 + 2R_20270957_20270962_+ 1 1 1 0 CG8908 FBtr0339542 20270784 20270994 2R + 20270937 20270975 3'utr CG8908 FlyBase G17698.1 AATCATCAGTCGCCAAATTGATACTCTTATATGTAAATC 17 20270955 0.838425112 2 16 148 0.944444444 1.230448921 0 0.058823529 0.111111111 17 1 0 17 2R:20270937-20270975 6 CG8908 FBtr0339542 20270784 20270994 ATACTC 6mer2-7 dme-miR-12-5p 2R + 20270944 20270974 3'utr CG8908 FlyBase G13479.1 AGTCGCCAAATTGATACTCTTATATGTAAAT 14 20270955 0.707905213 4 13 100 0.913043478 1.322219295 0.043478261 0.357142857 0.608695652 14 2 0 21 2R:20270944-20270974 6 15.5 1685 FBgn0034493 153.9366667 3.596666667 5.44 0.10069076 4.309545876 2.849264706 2 2 2 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 2R 20271812 20271817 - 2R_20271812_20271817_- 1 1 1 0 CG10444 FBtr0086305|FBtr0086305 20271651|20271651 20272417|20272417 2R - 20271751 20272207 3'utr CG10444 FlyBase G25199.1 TTATTAGTCGTGTTGCAAATGTTCACAAGCGCATCATTAAGAGGCCTCTTAAGAATAGTCAAATGTTTTTTACAAGAACGTATCAAAAGTAGGAGTCTACCTCAATGAACTTTTACAGAGGGACAATAATCAATTTGGAGCCTAAAAGCGAGTTGGCCGACTACTTTCCCATGTTGAGCATTGGCAGCCACAATGCCCCACATAAATTATTGATTTAGTAGTACATCTAATTTTAATGGGATATTTATATTCATACCTCTTAGTTACTCGATATTTGCATACATAGATAACATAATAACATTACAATAATACACTACAGTGAGCACCGCCTATAAATAGTTACTACATGGCTCTTAAAGCATTACATTGCGCCACAGTGTGAATTCTGTTTACTTATATACCTCTACTATATGTACACAAATATACTATAGACTAATTATATACTCGTGTCGTGTCG 76 20271824 0.984333272 42 70 552 0.921348315 1.612783857 0.134831461 0.171052632 0.292134831 76 6 1 82 2R:20271751-20272207 6 CG10444 FBtr0086305|FBtr0086305 20271651|20271651 20272417|20272417 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 2R - 20271735 20271889 3'utr CG10444 FlyBase G19056.1 GTGAGCACCGCCTATAAATAGTTACTACATGGCTCTTAAAGCATTACATTGCGCCACAGTGTGAATTCTGTTTACTTATATACCTCTACTATATGTACACAAATATACTATAGACTAATTATATACTCGTGTCGTGTCGCAATCAACCATTGAAC 21 20271824 0.979099797 13 20 144 0.9 1.431363764 0.1 0.380952381 0.566666667 21 3 0 27 2R:20271735-20271889 6 5.5 1686 FBgn0034494 948.11 41.53333333 63.96 0.005801015 0.132423756 0.085991245 7 7 7 0.01 dme-miR-252-5p 7mer-m8 GTACTTA 2R 20281767 20281773 - 2R_20281767_20281773_- 0.588299917 0.588299917 0.588299917 0 CG16868 FBtr0086302 20281627 20282149 2R - 20281714 20281800 3'utr CG16868 FlyBase G25216.1 TATTTGATAAGCACCAACAACAGAAATGTACTTACTTGTCTGATTGTAAGATACCATGTCGTATATCGTTTTTTGTAATAGCCCCTA 76 20281774 0.980514084 9 75 469 1 1.991226076 0.020408163 0.236842105 0.408163265 76 0 0 98 2R:20281714-20281800 7 CG16868 FBtr0086302 20281627 20282149 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 20281738 20281797 3'utr CG16868 FlyBase G19068.1 TTGATAAGCACCAACAACAGAAATGTACTTACTTGTCTGATTGTAAGATACCATGTCGTA 58 20281774 0.978303672 5 55 372 0.95 1.880813592 0.0125 0.25862069 0.4625 58 4 0 76 2R:20281738-20281797 7 63 1687 FBgn0034498 322.4366667 7.546666667 11.61333333 0.195387208 8.348056537 5.424799082 1 1 1 0.01 dme-miR-980-3p 6mer2-7 GCAGCT 2R 20309486 20309491 - 2R_20309486_20309491_- 1 1 1 0 CG13868 FBtr0086298|FBtr0301209 20309025|20308775 20309572|20309572 2R - 20309335 20309516 3'utr CG13868 FlyBase G25221.1 ACAGGCGATAAAAGACATTGACAACGCAGCTGCAACTTAGAGTTCCGAACCTATTTGAATACTTTGAATACTTTGTCCTTTCCACAGTAATATTCTTTTTAGTAGCATATAGGCACCTCTTACACCAGCACACACGATTCAAGTATATATTCAATTTAGTCTAGTATATATTTCAAAATATT 19 20309499 0.973044184 15 18 119 1 1.342422681 0.136363636 0.157894737 0.272727273 19 0 0 22 2R:20309335-20309516 6 CG13868 FBtr0301209|FBtr0086298 20308775|20309025 20309572|20309572 GCAGCT 6mer2-7 dme-miR-980-3p 2R - 20309460 20309508 3'utr CG13868 FlyBase G19073.1 TAAAAGACATTGACAACGCAGCTGCAACTTAGAGTTCCGAACCTATTTG 8 20309499 0.95516207 4 8 41 1 1.079181246 0.25 0.375 0.583333333 8 0 0 12 2R:20309460-20309508 6 6.5 1688 FBgn0034501 2191.81 83.72333333 128.32 0.002965586 0.07763666 0.050654613 8 8 8 0.01 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 2R 20324528 20324533 + 2R_20324528_20324533_+ 1 1 1 0 CG8920 FBtr0086281|FBtr0301207 20324518|20324518 20324717|20324717 2R + 20324504 20324539 stop_codon CG8920 FlyBase G17711.1 AAACAACGACATCTGAATTGTGACTGGTGCCCTATA 59 20324522 0.612507206 6 58 386 0.987654321 1.903089987 0.12345679 0.322033898 0.50617284 59 1 0 80 2R:20324504-20324539 6 CG8920 FBtr0086281|FBtr0301207 20324518|20324518 20324717|20324717 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 2R + 20324504 20324549 stop_codon CG8920 FlyBase G13490.1 AAACAACGACATCTGAATTGTGACTGGTGCCCTATAAGTTTATATT 22 20324523 0.948628914 4 21 146 0.975 1.591064607 0.075 0.5 0.725 22 1 0 39 2R:20324504-20324549 6 40.5 1689 FBgn0027529 763.31 27.44 42.03333333 0.05305839 1.475947522 0.963521015 6 5 5.5 0.01 dme-miR-283-5p 6mer3-8 TGATAT 2R 20324615 20324620 + 2R_20324615_20324620_+ 1 1 1 0 CG8920 FBtr0086281|FBtr0301207 20324518|20324518 20324717|20324717 2R + 20324598 20324635 3'utr CG8920 FlyBase G17712.1 ATAAACCGGAACTGACTTGATATGTTATTGCTAACACA 8 20324615 0.735816155 3 8 52 1 0.954242509 0.222222222 0.125 0.222222222 8 0 0 9 2R:20324598-20324635 6 CG8920 FBtr0086281|FBtr0301207 20324518|20324518 20324717|20324717 TGATAT 6mer3-8 dme-miR-283-5p 2R + 20324584 20324620 3'utr CG8920 FlyBase G13491.1 CTATAAGTGCTTCAATAAACCGGAACTGACTTGATAT 5 20324599 0.931782444 3 5 24 1 0.698970004 0 0 0 5 0 0 5 2R:20324584-20324620 6 6 1690 FBgn0027529 763.31 27.44 42.03333333 0.007860502 0.218658892 0.142743854 0 16 8 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2R 20559469 20559475 - 2R_20559469_20559475_- 0.521223855 0.521223855 0.521223855 0 Mgat1 FBtr0086259 20559154 20560039 2R - 20559451 20559566 3'utr Mgat1 FlyBase G25232.2 TAGCAATGGTTAAGTTATAGTATGCAGCGTGTAATTTGTAGCATTTAAGTTGATCCAACTAGAGTTCTAACGGCAACGGACGTGTAATATTTGTGATTTTTGATTATTTAATTTAC 172 20559477 0.985210997 18 162 1872 0.95631068 1.817344971 0.427184466 0.162790698 0.300970874 172 7 2 197 2R:20559451-20559566 7 Mgat1 FBtr0086259 20559154 20560039 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 20559451 20559534 3'utr Mgat1 FlyBase G19081.1 AATTTGTAGCATTTAAGTTGATCCAACTAGAGTTCTAACGGCAACGGACGTGTAATATTTGTGATTTTTGATTATTTAATTTAC 118 20559477 0.975422873 14 111 1290 0.948571429 1.742986833 0.394285714 0.389830508 0.588571429 118 7 2 166 2R:20559451-20559534 7 129.5 1691 FBgn0034521 428.4 18.24333333 27.83333333 0.302287582 7.098483464 4.652694611 2 2 2 0.01 dme-miR-14-3p 8mer-A1 AAGACTGA 2R 20620888 20620895 + 2R_20620888_20620895_+ 0.643565469 0.643565469 0.643565469 0 CG9945 FBtr0086226|FBtr0086225 20620747|20620747 20620997|20621081 2R + 20620842 20620914 3'utr CG9945 FlyBase G17751.1 ATATTCACCACAGTCGGGCCGGCTGGGATAATTGGTTCTATTAAATAAGACTGAAGAATATGTCACTCACTTG 88 20620887 0.785108672 15 84 616 0.94 1.973127854 0.17 0.125 0.23 88 6 0 94 2R:20620842-20620914 8 CG9945 FBtr0086225 20620747 20621081 AAGACTGA 8mer-A1 dme-miR-14-3p 2R + 20620814 20620907 3'utr CG9945 FlyBase G13517.1 TAGTGGCTTGCCTAAGCGACGCACGAGAATATTCACCACAGTCGGGCCGGCTGGGATAATTGGTTCTATTAAATAAGACTGAAGAATATGTCAC 40 20620886 0.985662323 10 34 282 0.8125 1.414973348 0.140625 0.375 0.609375 40 11 1 52 2R:20620814-20620907 8 42.5 1692 FBgn0034527 339.9533333 21.37333333 32.82 0.125017159 1.988459139 1.294942108 1 2 1.5 0.01 dme-miR-932-5p 8mer-A1 GGAATTGA 2R 20634028 20634035 - 2R_20634028_20634035_- 0.674982804 0.674982804 0.674982804 0 rig FBtr0086252 20633874 20634190 2R - 20634009 20634053 3'utr rig FlyBase G25265.1 AATAGCCAGAAACTGTGTGGAATTGAAACCGATTTGAGTCGCCTT 11 20634037 0.895031137 4 8 48 0.923076923 1.079181246 0.307692308 0.181818182 0.307692308 11 1 0 12 2R:20634009-20634053 8 rig FBtr0086252 20633874 20634190 GGAATTGA 8mer-A1 dme-miR-932-5p 2R - 20634009 20634052 3'utr rig FlyBase G19107.1 ATAGCCAGAAACTGTGTGGAATTGAAACCGATTTGAGTCGCCTT 10 20634036 0.767282895 6 10 44 1 1.113943352 0 0.3 0.461538462 10 0 0 13 2R:20634009-20634052 8 9 1693 FBgn0250850 1237.703333 36.17666667 55.41333333 0.007271532 0.248779139 0.162415784 2 1 1.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 20662888 20662893 - 2R_20662888_20662893_- 1 1 1 0 Fem-1 FBtr0086246|FBtr0086246|FBtr0086246|FBtr0086245|FBtr0086245|FBtr0086245 20662472|20662472|20662472|20662472|20662472|20662472 20662931|20662931|20662931|20662931|20662931|20662931 2R - 20662868 20662946 stop_codon Fem-1 FlyBase G25284.1 AAGGTGCTGCCGTAGATAGTCAATGGCTTGAGCCGCAACTGAAGTAATTAGAACTGTGAATACAATAAGCCACGTTGGA 42 20662886 0.926851832 10 38 223 0.9 1.352182518 0.14 0.166666667 0.3 42 4 1 45 2R:20662868-20662946 6 Fem-1 FBtr0086245|FBtr0086245|FBtr0086245|FBtr0086246|FBtr0086246|FBtr0086246 20662472|20662472|20662472|20662472|20662472|20662472 20662931|20662931|20662931|20662931|20662931|20662931 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 20662875 20662942 stop_codon Fem-1 FlyBase G19121.1 TGCTGCCGTAGATAGTCAATGGCTTGAGCCGCAACTGAAGTAATTAGAACTGTGAATACAATAAGCCA 28 20662899 0.789405457 10 24 144 0.825 1.041392685 0.275 0.321428571 0.525 28 5 2 33 2R:20662875-20662942 6 27.5 1694 FBgn0034542 388.61 17.94666667 27.52666667 0.070765034 1.532317979 0.999031242 -7 6 -0.5 0.01 dme-miR-2b-2-5p 6mer2-7 TGAAGA 2R 20827604 20827609 - 2R_20827604_20827609_- 1 1 1 0 sktl FBtr0071563 20827280 20827991 2R - 20827599 20827647 5'utr sktl FlyBase G25309.1 TTCTACTTGGTTGGAATTTGTTAGCGTGTTGCCTTAGCTGAAGATTTTG 15 20827614 0.686285335 7 14 122 0.944444444 0.929418926 0.166666667 0.133333333 0.277777778 15 0 1 17 2R:20827599-20827647 6 sktl FBtr0071563 20827280 20827991 TGAAGA 6mer2-7 dme-miR-2b-2-5p 2R - 20827553 20827628 5'utr sktl FlyBase G19138.1 GTTAGCGTGTTGCCTTAGCTGAAGATTTTGTTTTAATTTTTGAAATTATTGTGCTCGACAAGCGATGGGCTCAATC 8 20827614 0.979389517 5 7 54 1 1.146128036 0.357142857 0.375 0.642857143 8 0 0 14 2R:20827553-20827628 6 8 1695 FBgn0016984 2187.616667 79.33666667 122.04 0.003656948 0.100836099 0.065552278 5 5 5 0.01 dme-miR-970-3p 7mer-m8 TCTTATG 2R 21006788 21006794 + 2R_21006788_21006794_+ 0.658999343 0.658999343 0.658999343 0 CG10543 FBtr0071524|FBtr0332594 21006244|21006244 21007740|21007740 2R + 21006709 21006809 3'utr CG10543 FlyBase G17812.1 ATATGAAGCATATATATTAGGCTAAGCAACTATACAATAATGGCAGACAGACCACAACCACAAGCAACTTTCGAACAAATCTTATGCTTATTTAACATTTA 32 21006790 0.981538828 10 31 244 0.973684211 1.568201724 0.052631579 0.125 0.263157895 32 1 0 37 2R:21006709-21006809 7 CG10543 FBtr0332594|FBtr0071524 21006244|21006244 21007740|21007740 TCTTATG 7mer-m8 dme-miR-970-3p 2R + 21006764 21006833 3'utr CG10543 FlyBase G13554.1 AACCACAAGCAACTTTCGAACAAATCTTATGCTTATTTAACATTTACCATACGAGTTATGAACGCAACGC 11 21006790 0.984034172 6 11 90 1 1.322219295 0 0.636363636 0.80952381 11 0 0 21 2R:21006764-21006833 7 16 1696 FBgn0034570 1491.83 26.02 40.1 0.010725083 0.614911606 0.399002494 -2 -2 -2 0.01 dme-miR-190-5p 7mer-A1 CATATCA 2R 21007058 21007064 + 2R_21007058_21007064_+ 0.782911824 0.782911824 0.782911824 0 CG10543 FBtr0071524|FBtr0332594 21006244|21006244 21007740|21007740 2R + 21006902 21007181 3'utr CG10543 FlyBase G17813.1 CCGTACATACGATATCTATGTAAAGCTCGAGAGAGAGACGCCCAAGTTGTAGATGAGATGATTGATTTTAATCGCAAACAAATCGCATCACAAACGGAGACGAAAGATAGATAGAAAACAAAAGTACACGACGCTTTGACCACACAAAGTTGTAACCATATCATGAGGCCTCTTTCCCCGTATAATTAATTGTATTTTCGATAGTGCTTGTTATTTTCTATTTAGTTAACGAATTGATTATACTTACGAAGCCTTTCTGCTGATTACCGCCAGCCACACT 136 21007065 0.997362143 26 134 861 0.981707317 2.206825876 0.048780488 0.154411765 0.298780488 136 3 0 161 2R:21006902-21007181 7 CG10543 FBtr0332594|FBtr0071524 21006244|21006244 21007740|21007740 CATATCA 7mer-A1 dme-miR-190-5p 2R + 21006986 21007092 3'utr CG10543 FlyBase G13555.1 GCATCACAAACGGAGACGAAAGATAGATAGAAAACAAAAGTACACGACGCTTTGACCACACAAAGTTGTAACCATATCATGAGGCCTCTTTCCCCGTATAATTAATT 95 21007065 0.975566791 9 90 570 0.959183673 1.672097858 0.102040816 0.4 0.612244898 95 4 2 141 2R:21006986-21007092 7 67.5 1697 FBgn0034570 1491.83 26.02 40.1 0.045246442 2.59415834 1.683291771 -7 -7 -7 0.01 dme-miR-986-5p 6mer2-7 TTCGAG 2R 21015835 21015840 - 2R_21015835_21015840_- 1 1 1 0 CG3295 FBtr0071547 21015592 21015901 2R - 21015796 21015898 3'utr CG3295 FlyBase G25341.1 ACATCTATGTATTCACCTTATGATAATCACCACTGCTTATATGACCAGGCTCAGGCGGTTCGAGGACTGGTGTTGGTTGGCCGGCTTTCCTTAACAAAACGTA 21 21015822 0.982532256 11 20 153 0.916666667 1.342422681 0.083333333 0.142857143 0.25 21 2 0 22 2R:21015796-21015898 6 CG3295 FBtr0071547 21015592 21015901 TTCGAG 6mer2-7 dme-miR-986-5p 2R - 21015806 21015859 3'utr CG3295 FlyBase G19166.1 TATGACCAGGCTCAGGCGGTTCGAGGACTGGTGTTGGTTGGCCGGCTTTCCTTA 16 21015822 0.846549839 5 13 103 0.826086957 1.278753601 0.260869565 0.375 0.565217391 16 4 0 19 2R:21015806-21015859 6 11.5 1698 FBgn0034573 416.6666667 27.28666667 41.51 0.0276 0.421451258 0.277041677 -18 -18 -18 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2R 21050760 21050765 - 2R_21050760_21050765_- 1 1 1 0 shg FBtr0071546 21049652 21050805 2R - 21050726 21050807 stop_codon shg FlyBase G25351.1 AGGAATCTTCGCCAGCCGCGGTATGATGACGTAGAAATTGAAAAGACTTTTTATATACTAAGAGTTGTACGGATGTTGATAG 55 21050758 0.985065834 10 54 440 0.984615385 1.806179974 0.2 0.145454545 0.276923077 55 1 0 64 2R:21050726-21050807 6 shg FBtr0071546 21049652 21050805 AAGACT 6mer3-8 dme-miR-14-3p 2R - 21050743 21050785 3'utr shg FlyBase G19172.1 ATGATGACGTAGAAATTGAAAAGACTTTTTATATACTAAGAGT 48 21050758 0.676075888 3 47 381 0.985507246 1.832508913 0.202898551 0.3125 0.52173913 48 1 0 68 2R:21050743-21050785 6 49 1699 FBgn0003391 514.9966667 9.77 15.06666667 0.095146247 5.015353122 3.252212389 -7 -7 -7 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 2R 21059237 21059242 + 2R_21059237_21059242_+ 1 1 1 0 cpa FBtr0071532 21059060 21059883 2R + 21059226 21059267 3'utr cpa FlyBase G17833.1 AGGTGCCTGCCGAAAAAGCAAATGTCTGTAATTGGCTATATA 51 21059258 0.726238908 6 50 321 0.983333333 1.770852012 0.2 0.156862745 0.283333333 51 1 0 59 2R:21059226-21059267 6 cpa FBtr0071532 21059060 21059883 GAAAAA 6mer3-8 dme-miR-980-5p 2R + 21059226 21059271 3'utr cpa FlyBase G13569.1 AGGTGCCTGCCGAAAAAGCAAATGTCTGTAATTGGCTATATACATA 39 21059258 0.619731618 6 38 241 0.984126984 1.491361694 0.063492063 0.487179487 0.682539683 39 0 1 62 2R:21059226-21059271 6 37.5 1700 FBgn0034577 1983.766667 126.3666667 193.9 0.018903433 0.296755473 0.193398659 -21 -21 -21 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2R 21059772 21059777 + 2R_21059772_21059777_+ 1 1 1 0 cpa FBtr0071532 21059060 21059883 2R + 21059695 21059793 3'utr cpa FlyBase G17836.1 CCTAGTATGAGCATGAATAATAACTATGCTAAACCACTGATCATTTTTGCCAGCTCTCCATTGACAAACAATAACTAAAGACTTTGATTTTATAAAAAC 83 21059779 0.982072357 10 83 616 1 1.982271233 0.020833333 0.144578313 0.260416667 83 0 0 96 2R:21059695-21059793 6 cpa FBtr0071532 21059060 21059883 AAGACT 6mer3-8 dme-miR-14-3p 2R + 21059729 21059794 3'utr cpa FlyBase G13571.1 CACTGATCATTTTTGCCAGCTCTCCATTGACAAACAATAACTAAAGACTTTGATTTTATAAAAACA 58 21059779 0.982576389 5 58 437 1 1.934498451 0.023255814 0.327586207 0.546511628 58 0 0 86 2R:21059729-21059794 6 65.5 1701 FBgn0034577 1983.766667 126.3666667 193.9 0.033017996 0.518332894 0.337802991 -7 -7 -7 0.01 dme-miR-8-3p 8mer-A1 CAGTATTA 2R 21088057 21088064 + 2R_21088057_21088064_+ 0.671696981 0.671698106 0.671697543 7.78E-07 Treh FBtr0071540|FBtr0071538|FBtr0071539|FBtr0071536|FBtr0332423|FBtr0071537 21086953|21086953|21086953|21086953|21086953|21086953 21088226|21088226|21088226|21088226|21088226|21088226 2R + 21087963 21088129 3'utr Treh FlyBase G17844.1 ATTGCTACTCAAGTAGTGTGATTCCCCCCTCCGTGTTTGTGCGTGTGTTGTGAAGTCTGTAGTTGCTAACGTTTTTCGTTGAGTGCGGAGATTGCAGTATTAGTTTATCATTATTTGGTAGTTGAAGTGAGAGTTGTATATACTGAATTTATATGGGCATGCCCGAA 232 21088054 0.898140458 22 228 2040 0.985714286 2.139879086 0.05 0.168103448 0.310714286 232 3 1 276 2R:21087963-21088129 8 Treh FBtr0071536|FBtr0332423|FBtr0071537|FBtr0071540|FBtr0071538|FBtr0071539 21086953|21086953|21086953|21086953|21086953|21086953 21088226|21088226|21088226|21088226|21088226|21088226 CAGTATTA 8mer-A1 dme-miR-8-3p 2R + 21088009 21088138 3'utr Treh FlyBase G13577.1 GTTGTGAAGTCTGTAGTTGCTAACGTTTTTCGTTGAGTGCGGAGATTGCAGTATTAGTTTATCATTATTTGGTAGTTGAAGTGAGAGTTGTATATACTGAATTTATATGGGCATGCCCGAAATTGTTATT 186 21088054 0.900389723 20 181 1678 0.97689769 2.170261715 0.02970297 0.440860215 0.656765677 186 6 1 296 2R:21088009-21088138 8 151.5 1702 FBgn0003748 466.8133333 20.13666667 30.89333333 0.324540859 7.52358881 4.903970652 3 3 3 0.01 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 21123786 21123793 - 2R_21123786_21123793_- 0.479504594 0.625364269 0.552434432 0.103138383 CG4050 FBtr0071637|FBtr0071638 21123733|21123733 21124117|21124117 2R - 21123782 21123824 3'utr CG4050 FlyBase G25374.2 ACGTAATTTATATATGAAGGCCTGACGGTCTTGCATTTATTTA 8 21123794 0.968906009 3 6 64 0.75 0.77815125 0.125 0 0 8 2 0 6 2R:21123782-21123824 8 CG4050 FBtr0071637|FBtr0071638 21123733|21123733 21124117|21124117 TGCATTTA 8mer-A1 dme-miR-277-3p 2R - 21123755 21123808 3'utr CG4050 FlyBase G19189.1 AAGGCCTGACGGTCTTGCATTTATTTAAATAACGTTAGGACGTGTACTAAAATA 7 21123794 0.987773602 4 7 62 1 1 0.3 0.428571429 0.6 7 0 0 10 2R:21123755-21123808 8 6 1703 FBgn0020312 364 12.77333333 19.31 0.016483516 0.469728601 0.310719834 1 1 1 0.01 dme-miR-252-5p 7mer-m8 GTACTTA 2R 21123956 21123962 - 2R_21123956_21123962_- 0.588299917 0.588299917 0.588299917 0 CG4050 FBtr0071637|FBtr0071638 21123733|21123733 21124117|21124117 2R - 21123896 21124048 3'utr CG4050 FlyBase G25375.1 AAGGTTCCCACATTCTGTGAGACATACGGAGTCTGATAAAAATAACACAAAGTGAAGATATGTGGTCCATTCCACACAATTCCGTTGTACTTATTAGTTATTAACGTAATTCTTTGATCATATACTCGTTTTGAAGATATTTATACAATTTTT 144 21123963 0.758965847 33 134 1291 0.934911243 1.596597096 0.142011834 0.166666667 0.289940828 144 8 3 158 2R:21123896-21124048 7 CG4050 FBtr0071637|FBtr0071638 21123733|21123733 21124117|21124117 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 21123903 21124046 3'utr CG4050 FlyBase G19190.1 GGTTCCCACATTCTGTGAGACATACGGAGTCTGATAAAAATAACACAAAGTGAAGATATGTGGTCCATTCCACACAATTCCGTTGTACTTATTAGTTATTAACGTAATTCTTTGATCATATACTCGTTTTGAAGATATTTATAC 95 21123963 0.772790172 26 90 783 0.957142857 1.826074803 0.221428571 0.347368421 0.557142857 95 5 1 134 2R:21123903-21124046 7 57 1704 FBgn0020312 364 12.77333333 19.31 0.156593407 4.462421712 2.951838426 1 1 1 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 21129646 21129653 - 2R_21129646_21129653_- 0.500120318 0.500120318 0.500120318 0 Magi FBtr0071636|FBtr0342874|FBtr0342873 21129461|21129461|21129461 21129874|21129874|21129874 2R - 21129550 21129695 3'utr Magi FlyBase G25389.1 TTCTTAAGATACCGATCATTATCTTAGGCTAAGTTACTGCTTGTACTTAAACGTTAAGACAATTTGCCAGTTTGTGAGATATTAATCACTTAGCTTAAGCTGTTTTAGACATATACGAATTGTACAAATGTAAAGGACTTTAAATT 98 21129654 0.797334114 26 89 797 0.925 1.443262987 0.066666667 0.183673469 0.333333333 98 6 3 111 2R:21129550-21129695 8 Magi FBtr0071636|FBtr0342874|FBtr0342873 21129461|21129461|21129461 21129874|21129874|21129874 GTACTTAA 8mer-A1 dme-miR-252-5p 2R - 21129526 21129690 3'utr Magi FlyBase G19200.1 AAGATACCGATCATTATCTTAGGCTAAGTTACTGCTTGTACTTAAACGTTAAGACAATTTGCCAGTTTGTGAGATATTAATCACTTAGCTTAAGCTGTTTTAGACATATACGAATTGTACAAATGTAAAGGACTTTAAATTTTTATCTCGAGTATGTATATTATT 92 21129654 0.988612359 24 84 787 0.923076923 1.51851394 0.13986014 0.391304348 0.608391608 92 8 3 132 2R:21129526-21129690 8 43.5 1705 FBgn0034590 938.3433333 22.88 35.01 0.046358298 1.901223776 1.242502142 1 1 1 0.01 dme-miR-1006-3p 7mer-A1 GAATTTA 2R 21129763 21129769 - 2R_21129763_21129769_- 0.823349562 0.823349562 0.823349562 0 Magi FBtr0071636|FBtr0342874|FBtr0342873 21129461|21129461|21129461 21129874|21129874|21129874 2R - 21129725 21129892 stop_codon Magi FlyBase G25390.1 CAGCAGCCACAATTATGACTCTGAGACCTACGCATTCGGCTCTATAAGAGCTTTCTATAGTGTTGCATCGCCTGCAGGCCCTTAGTTTGTACTTTCGTTAGCAAAGTACTCACCCCAAAGACTGAATTTAGTAGCATATGTAAGCCAAACCCTTTGCAAGTCTCAAAA 125 21129766 0.974034658 20 115 711 0.923611111 1.822821645 0.118055556 0.128 0.243055556 125 10 1 133 2R:21129725-21129892 7 Magi FBtr0071636|FBtr0342874|FBtr0342873 21129461|21129461|21129461 21129874|21129874|21129874 GAATTTA 7mer-A1 dme-miR-1006-3p 2R - 21129725 21129838 3'utr Magi FlyBase G19201.1 CTATAGTGTTGCATCGCCTGCAGGCCCTTAGTTTGTACTTTCGTTAGCAAAGTACTCACCCCAAAGACTGAATTTAGTAGCATATGTAAGCCAAACCCTTTGCAAGTCTCAAAA 89 21129765 0.972189483 20 81 505 0.902255639 2.079181246 0.082706767 0.348314607 0.563909774 89 13 0 120 2R:21129725-21129838 7 76 1706 FBgn0034590 938.3433333 22.88 35.01 0.080993808 3.321678322 2.17080834 -3 -4 -3.5 0.01 dme-miR-184-3p 6mer3-8 TCCGTC 2R 21145187 21145192 + 2R_21145187_21145192_+ 1 1 1 0 Xbp1 FBtr0310044 21144863 21145750 2R + 21144965 21145267 3'utr Xbp1 FlyBase G17859.1 GAGAACAGCCACAATCACAGCGACAGCGGCCGCCTCGCAACTACAGGCCACTCCGGACACAGTGTACGGCACGTATGATGCCAAGACGAACTCGATCACCATCGTGATGGACGGGGATGCGGTGCCGGTGAACGAGGCCGTCGAGGAGATCTACTGTGACGGCGTCAGCGCTGGCGACGACTCAACGGACGTGATCATGAAGTGTCCGCCGCCAGCGACGTCTCCGTCACAGGTCTATCTCAACGTGATGAACGCCGTCGACAATTCGGACGACGAGGAAAGCTTCGATCCGATCGACCGATT 121 21145166 0.987481973 34 112 433 0.924137931 1.826074803 0.386206897 0.140495868 0.282758621 121 10 1 134 2R:21144965-21145267 6 Xbp1 FBtr0310044 21144863 21145750 TCCGTC 6mer3-8 dme-miR-184-3p 2R + 21144988 21145262 3'utr Xbp1 FlyBase G13595.1 CAGCGGCCGCCTCGCAACTACAGGCCACTCCGGACACAGTGTACGGCACGTATGATGCCAAGACGAACTCGATCACCATCGTGATGGACGGGGATGCGGTGCCGGTGAACGAGGCCGTCGAGGAGATCTACTGTGACGGCGTCAGCGCTGGCGACGACTCAACGGACGTGATCATGAAGTGTCCGCCGCCAGCGACGTCTCCGTCACAGGTCTATCTCAACGTGATGAACGCCGTCGACAATTCGGACGACGAGGAAAGCTTCGATCCGATCGAC 79 21145167 0.944342392 28 70 289 0.865546218 1.167739185 0.378151261 0.367088608 0.579831933 79 10 6 103 2R:21144988-21145262 6 25 1707 FBgn0021872 6665.376667 377.2933333 573.4833333 0.003750726 0.066261441 0.043593246 21 20 20.5 0.01 dme-miR-2a-2-5p 7mer-m1 GATGAGG 2R 21145401 21145407 + 2R_21145401_21145407_+ 0.825582373 0.825582373 0.825582373 0 Xbp1 FBtr0310044 21144863 21145750 2R + 21145285 21145523 stop_codon Xbp1 FlyBase G17860.1 AGGCGATCTCCCCGTTGGCCAAATCCCCCGCATTGTCTCTACACTCGGCCACCTCGGACCATGGATACGAGTCCATACTGGGCTCTCCCACATCCGTGGCTCTCACTCTGCCCGCAGATGAGGACGATTTCCCCTGGGAGAGCAACTTTGACGAGCTGTTTCCCAGTTTGATCTGAGTTTTTCAAGCTGAAAACTTCGTTCTGTCTCTCTTTTATTGTTAAGTTTGGCCGGCCGCCGTT 201 21145413 0.90449879 44 195 1596 0.976284585 1.790636962 0.134387352 0.208955224 0.371541502 201 3 3 247 2R:21145285-21145523 7 Xbp1 FBtr0310044 21144863 21145750 GATGAGG 7mer-m1 dme-miR-2a-2-5p 2R + 21145374 21145473 stop_codon Xbp1 FlyBase G13597.1 ACATCCGTGGCTCTCACTCTGCCCGCAGATGAGGACGATTTCCCCTGGGAGAGCAACTTTGACGAGCTGTTTCCCAGTTTGATCTGAGTTTTTCAAGCTG 79 21145413 0.858162389 16 66 450 0.956896552 1.744292983 0.224137931 0.358974359 0.568965517 78 4 1 111 2R:21145374-21145473 7 30 1708 FBgn0021872 6665.376667 377.2933333 573.4833333 0.004500871 0.079513729 0.052311895 -12 -12 -12 0.01 dme-bantam-3p 6mer3-8 TGATCT 2R 21145453 21145458 + 2R_21145453_21145458_+ 1 1 1 0 Xbp1 FBtr0310044 21144863 21145750 2R + 21145285 21145523 stop_codon Xbp1 FlyBase G17860.1 AGGCGATCTCCCCGTTGGCCAAATCCCCCGCATTGTCTCTACACTCGGCCACCTCGGACCATGGATACGAGTCCATACTGGGCTCTCCCACATCCGTGGCTCTCACTCTGCCCGCAGATGAGGACGATTTCCCCTGGGAGAGCAACTTTGACGAGCTGTTTCCCAGTTTGATCTGAGTTTTTCAAGCTGAAAACTTCGTTCTGTCTCTCTTTTATTGTTAAGTTTGGCCGGCCGCCGTT 201 21145452 0.90449879 44 195 1596 0.976284585 1.790636962 0.134387352 0.208955224 0.371541502 201 3 3 247 2R:21145285-21145523 6 Xbp1 FBtr0310044 21144863 21145750 TGATCT 6mer3-8 dme-bantam-3p 2R + 21145374 21145473 stop_codon Xbp1 FlyBase G13597.1 ACATCCGTGGCTCTCACTCTGCCCGCAGATGAGGACGATTTCCCCTGGGAGAGCAACTTTGACGAGCTGTTTCCCAGTTTGATCTGAGTTTTTCAAGCTG 79 21145452 0.858162389 16 66 450 0.956896552 1.744292983 0.224137931 0.358974359 0.568965517 78 4 1 111 2R:21145374-21145473 6 44.5 1709 FBgn0021872 6665.376667 377.2933333 573.4833333 0.006676292 0.117945365 0.077595978 1 1 1 0.01 dme-miR-1012-3p 8mer-A1 TTGACTAA 2R 21145710 21145717 + 2R_21145710_21145717_+ 0.39614471 0.478701532 0.437423121 0.058376473 Xbp1 FBtr0310044|FBtr0310045 21144863|21145459 21145750|21145750 2R + 21145608 21145741 3'utr Xbp1 FlyBase G17861.2 TAGCTGTAGGTTTCCATTTATATTTAACAATCTCTAACCACATAGGCTTATGATTACTCTTATATGTATGTATTGTGCTCAAAGAATTTGAAAAAAAAACATTTGACTAAAAAATATTCAAAATATAAACCAAA 429 21145709 0.846178406 28 409 2740 0.960784314 2.088136089 0.145098039 0.153846154 0.288235294 429 17 3 490 2R:21145608-21145741 8 Xbp1 FBtr0310044|FBtr0310045 21144863|21145459 21145750|21145750 TTGACTAA 8mer-A1 dme-miR-1012-3p 2R + 21145623 21145748 3'utr Xbp1 FlyBase G13598.2 ATTTATATTTAACAATCTCTAACCACATAGGCTTATGATTACTCTTATATGTATGTATTGTGCTCAAAGAATTTGAAAAAAAAACATTTGACTAAAAAATATTCAAAATATAAACCAAACCAAACA 254 21145709 0.967857902 28 241 1539 0.96 1.681241237 0.105714286 0.279527559 0.477142857 254 8 6 336 2R:21145623-21145748 8 183 1710 FBgn0021872 6665.376667 377.2933333 573.4833333 0.027455313 0.485033749 0.31910256 1 1 1 0.01 dme-miR-276a-3p 7mer-A1 GTTCCTA 2R 21148379 21148385 - 2R_21148379_21148385_- 0.823349562 0.823349562 0.823349562 0 CG30389 FBtr0310423 21148263 21149340 2R - 21148373 21148404 3'utr CG30389 FlyBase G25405.1 ATTTTTGTTTAGTTCTGCTGTTCCTAAGAAAC 13 21148386 0.740578779 3 13 115 1 1.113943352 0.230769231 0 0 13 0 0 13 2R:21148373-21148404 7 CG30389 FBtr0310423 21148263 21149340 GTTCCTA 7mer-A1 dme-miR-276a-3p 2R - 21148368 21148400 3'utr CG30389 FlyBase G19216.1 TTGTTTAGTTCTGCTGTTCCTAAGAAACAAAAA 11 21148386 0.962646018 2 8 75 0.588235294 0.698970004 0 0.363636364 0.588235294 11 6 1 10 2R:21148368-21148400 7 12 1711 FBgn0050389 2516.626667 66.38 102.5 0.004768288 0.180777343 0.117073171 1 1 1 0.01 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2R 21148537 21148542 - 2R_21148537_21148542_- 1 1 1 0 CG30389 FBtr0310423 21148263 21149340 2R - 21148461 21148587 3'utr CG30389 FlyBase G25406.1 TTTGCACGACCTCTGCCTCTTGCCCAACGATTCAATGGAATATTTTTGAAGTCTGCGCCCTTGATTTATTATCTCATTAAATTATTTTTGTTATAAAACCTTAAATGTATGCTATAATTTAGAACCT 52 21148521 0.824957765 14 45 466 0.867647059 1.293730757 0.25 0.269230769 0.441176471 52 7 2 59 2R:21148461-21148587 6 CG30389 FBtr0310423 21148263 21149340 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2R - 21148498 21148581 3'utr CG30389 FlyBase G19217.1 CGACCTCTGCCTCTTGCCCAACGATTCAATGGAATATTTTTGAAGTCTGCGCCCTTGATTTATTATCTCATTAAATTATTTTTG 33 21148535 0.801786664 18 32 303 0.98 1.69019608 0.22 0.393939394 0.6 33 1 0 49 2R:21148498-21148581 6 23 1712 FBgn0050389 2516.626667 66.38 102.5 0.009139218 0.346489907 0.224390244 -21 -7 -14 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 21148649 21148654 - 2R_21148649_21148654_- 0.999999999 0.999999999 0.999999999 0 CG30389 FBtr0310423 21148263 21149340 2R - 21148613 21148705 3'utr CG30389 FlyBase G25407.1 AAGCCAAGGAAGTACCCCCCAAAATCCTATGTAAAATGTTTTCTATTTTTTACCAAACGCTGTGACAGAGTTGGACCAACCGAAGTGATGGCC 22 21148656 0.999947989 9 20 133 0.916666667 1.342422681 0 0.090909091 0.166666667 22 2 0 22 2R:21148613-21148705 6 CG30389 FBtr0310423 21148263 21149340 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 21148599 21148661 3'utr CG30389 FlyBase G19218.1 ATTTTTTACCAAACGCTGTGACAGAGTTGGACCAACCGAAGTGATGGCCATGATCTTGGGGAG 15 21148656 0.97120576 7 13 74 0.869565217 1.301029996 0 0.533333333 0.695652174 15 3 0 20 2R:21148599-21148661 6 13 1713 FBgn0050389 2516.626667 66.38 102.5 0.005165645 0.195842121 0.126829268 2 2 2 0.01 dme-miR-304-5p 8mer-A1 TGAGATTA 2R 21149249 21149256 - 2R_21149249_21149256_- 0.625363359 0.625363359 0.625363359 0 CG30389 FBtr0310423|FBtr0071632|FBtr0071633|FBtr0330235 21148263|21148731|21148731|21148731 21149340|21149340|21149340|21149340 2R - 21149238 21149283 stop_codon CG30389 FlyBase G25409.1 TCGCACATGCATCTGCGACGACAAGTTTGAGATTATTATACTTTAT 65 21149257 0.780796593 3 63 489 0.958333333 1.537819095 0.347222222 0.107692308 0.194444444 65 2 1 69 2R:21149238-21149283 8 CG30389 FBtr0310423|FBtr0330235|FBtr0071633|FBtr0071632 21148263|21148731|21148731|21148731 21149340|21149340|21149340|21149340 TGAGATTA 8mer-A1 dme-miR-304-5p 2R - 21149238 21149284 stop_codon CG30389 FlyBase G19221.1 CTCGCACATGCATCTGCGACGACAAGTTTGAGATTATTATACTTTAT 34 21149257 0.769324624 4 33 253 0.981132075 1.716003344 0.471698113 0.411764706 0.622641509 34 1 0 52 2R:21149238-21149284 8 49.5 1714 FBgn0050389 2516.626667 66.38 102.5 0.019669187 0.745706538 0.482926829 1 1 1 0.01 dme-miR-304-5p 8mer-A1 TGAGATTA 2R 21162115 21162122 - 2R_21162115_21162122_- 0.625363359 0.625363359 0.625363359 0 CG4266 FBtr0342871|FBtr0113100|FBtr0310422|FBtr0071629 21161711|21161711|21161711|21161711 21162255|21162255|21164953|21162255 2R - 21162065 21162160 3'utr CG4266 FlyBase G25426.1 GTAACTCCATACATGCGAACATTTTACCGTTTTTAAATTGAGATTACGTAGCATTTTTGACGAGGGGGGTGGGGGTTGAACCGGACGCTTTTAAAA 23 21162123 0.986398093 6 22 182 0.961538462 1.397940009 0.192307692 0.130434783 0.230769231 23 1 0 25 2R:21162065-21162160 8 CG4266 FBtr0310422|FBtr0071629|FBtr0342871|FBtr0113100 21161711|21161711|21161711|21161711 21164953|21162255|21162255|21162255 TGAGATTA 8mer-A1 dme-miR-304-5p 2R - 21162106 21162140 3'utr CG4266 FlyBase G19232.1 ATTTTACCGTTTTTAAATTGAGATTACGTAGCATT 6 21162123 0.819123942 2 6 61 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 2R:21162106-21162140 8 10.5 1715 FBgn0034598 911.3333333 25.02 38.24333333 0.01152158 0.419664269 0.274557657 1 1 1 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2R 21162660 21162665 - 2R_21162660_21162665_- 1 1 1 0 CG4266 FBtr0310422 21161711 21164953 2R - 21162636 21162699 3'utr CG4266 FlyBase G25428.1 GTGGACACCGAGGAGGATTGGGATCAGGAACTTCAAGACTATGAGGCGAGAATGGAGGCCCAGA 55 21162658 0.924243743 5 53 187 0.983870968 1.785329835 0.161290323 0.127272727 0.225806452 55 1 0 61 2R:21162636-21162699 6 CG4266 FBtr0310422 21161711 21164953 AAGACT 6mer3-8 dme-miR-14-3p 2R - 21162633 21162696 3'utr CG4266 FlyBase G19234.1 GACACCGAGGAGGATTGGGATCAGGAACTTCAAGACTATGAGGCGAGAATGGAGGCCCAGAAGC 38 21162658 0.909998636 4 37 121 0.983333333 1.770852012 0.266666667 0.394736842 0.616666667 38 1 0 59 2R:21162633-21162696 6 44.5 1716 FBgn0034598 911.3333333 25.02 38.24333333 0.048829554 1.778577138 1.163601499 -7 -7 -7 0.01 dme-miR-968-5p 6mer3-8 ACTACT 2R 21164783 21164788 - 2R_21164783_21164788_- 1 1 1 0 CG4266 FBtr0310422 21161711 21164953 2R - 21164700 21164816 5'utr CG4266 FlyBase G25431.1 AAGGGTGTGAAAAGCAAGGAGTGGAAGGACTACTGGGACCTCGAATTGGGTGTTACTTACATTCCTTGGTCCAAACTCAGTTCGGATACGGACTTCGACGCGCTGGAGGAGGGTGGT 17 21164783 0.932414116 6 17 69 1 1.322219295 0.333333333 0.235294118 0.380952381 17 0 0 21 2R:21164700-21164816 6 CG4266 FBtr0310422 21161711 21164953 ACTACT 6mer3-8 dme-miR-968-5p 2R - 21164763 21164801 5'utr CG4266 FlyBase G19236.1 AAGGAGTGGAAGGACTACTGGGACCTCGAATTGGGTGTT 9 21164783 0.824259855 2 9 38 1 1 0.4 0.111111111 0.2 9 0 0 10 2R:21164763-21164801 6 11 1717 FBgn0034598 911.3333333 25.02 38.24333333 0.012070227 0.439648281 0.287631831 -5 -5 -5 0.01 dme-miR-277-3p 6mer3-8 TGCATT 2R 21169989 21169994 - 2R_21169989_21169994_- 1 1 1 0 LSm1 FBtr0071628 21169967 21170064 2R - 21169976 21170009 3'utr LSm1 FlyBase G25437.1 TTTGTATATTTGTACTGCATTAAAAAACTATGTT 22 21169999 0.68222221 5 22 204 1 1.431363764 0 0.227272727 0.37037037 22 0 0 27 2R:21169976-21170009 6 LSm1 FBtr0071628 21169967 21170064 TGCATT 6mer3-8 dme-miR-277-3p 2R - 21169969 21170012 3'utr LSm1 FlyBase G19241.1 CTCTTTGTATATTTGTACTGCATTAAAAAACTATGTTAAAACCT 9 21170000 0.989505528 5 9 86 1 1.079181246 0 0.333333333 0.5 9 0 0 12 2R:21169969-21170012 6 15.5 1718 FBgn0261067 205 46.4 71.04 0.075609756 0.334051724 0.218186937 5 6 5.5 0.01 dme-miR-33-5p 6mer2-7 AATGCA 2R 21169989 21169994 + 2R_21169989_21169994_+ 1 1 1 0 hng1 FBtr0071575 21169943 21170010 2R + 21169969 21170006 3'utr hng1 FlyBase G17876.1 AGGTTTTAACATAGTTTTTTAATGCAGTACAAATATAC 23 21169991 0.821629737 6 20 211 0.807692308 1.322219295 0 0.130434783 0.230769231 23 5 0 21 2R:21169969-21170006 6 hng1 FBtr0071575 21169943 21170010 AATGCA 6mer2-7 dme-miR-33-5p 2R + 21169969 21170007 3'utr hng1 FlyBase G13608.1 AGGTTTTAACATAGTTTTTTAATGCAGTACAAATATACA 18 21169991 0.833590818 3 17 178 0.952380952 1.301029996 0.142857143 0.111111111 0.238095238 18 1 0 20 2R:21169969-21170007 6 19 1719 FBgn0034599 146 16.78333333 25.62333333 0.130136986 1.132075472 0.741511643 -2 -2 -2 0.01 dme-miR-34-5p 6mer2-7 ACTGCC 2R 21174115 21174120 + 2R_21174115_21174120_+ 1 1 1 0 Xpd FBtr0071576 21174077 21174504 2R + 21174088 21174138 3'utr Xpd FlyBase G17887.1 GGTGCTCTGCCAACCGGCTCTTTGTCGACTGCCTTCCGGGAATAACTCAAC 11 21174121 0.779960928 3 11 75 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 2R:21174088-21174138 6 Xpd FBtr0071576 21174077 21174504 ACTGCC 6mer2-7 dme-miR-34-5p 2R + 21174082 21174134 3'utr Xpd FlyBase G13614.1 GTGGAAGGTGCTCTGCCAACCGGCTCTTTGTCGACTGCCTTCCGGGAATAACT 11 21174121 0.714868072 4 11 82 1 1.113943352 0.230769231 0.181818182 0.307692308 11 0 0 13 2R:21174082-21174134 6 10.5 1720 FBgn0261850 258.9866667 11.14666667 16.99 0.040542628 0.941985646 0.618010594 -6 -6 -6 0.01 dme-miR-317-5p 6mer3-8 GTATCC 2R 21174398 21174403 + 2R_21174398_21174403_+ 1 1 1 0 Xpd FBtr0071576 21174077 21174504 2R + 21174380 21174407 3'utr Xpd FlyBase G17889.1 GTATCTATACCTGTGATTGTATCCGGAT 11 21174397 0.694988051 5 11 95 1 1.079181246 0 0.090909091 0.166666667 11 0 0 12 2R:21174380-21174407 6 Xpd FBtr0071576 21174077 21174504 GTATCC 6mer3-8 dme-miR-317-5p 2R + 21174354 21174402 3'utr Xpd FlyBase G13615.1 CGAGTTTTGCTCTTGCAGTTGTATTTGTATCTATACCTGTGATTGTATC 12 21174397 0.987362668 5 12 104 1 1.414973348 0 0.583333333 0.807692308 12 0 0 26 2R:21174354-21174402 5 11 1721 FBgn0261850 258.9866667 11.14666667 16.99 0.042473229 0.986842105 0.64743967 1 1 1 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2R 21192178 21192184 + 2R_21192178_21192184_+ 0.521223855 0.521223855 0.521223855 0 tud FBtr0342870|FBtr0071582 21192125|21192125 21192913|21192913 2R + 21192066 21192379 stop_codon tud FlyBase G17941.1 TGTCGTACGACTCTTCTACCAGAGCAAGAACATCAGCGAGAAGCTTCAGGAATGTCAGTGATCACCCCGTTGTACAGTCAGATCGGACTCATATGTGCTCCATGCAGGAGATTGTGATTGGGTTGGCTAAAAACATGCGATGTATTATCCATTAAGTTGAACGAGTTAAACTTATTCAAAGGGAAGAGGAGGACACCACACGATTAGCCAAGATGCTTCATTGACTTTTCATGGAAAACCAAAATGAAAGCAATTTTTAATATTAATTAAAGAATCAATACGGAATGCAAAACATTATCACCAAAAACACAACA 474 21192184 0.980054934 35 459 3211 0.970017637 1.837272703 0.276895944 0.160337553 0.298059965 474 10 7 550 2R:21192066-21192379 7 tud FBtr0342870|FBtr0071582 21192125|21192125 21192913|21192913 TGTGATT 7mer-m1 dme-miR-308-3p 2R + 21192096 21192227 stop_codon tud FlyBase G13660.1 CATCAGCGAGAAGCTTCAGGAATGTCAGTGATCACCCCGTTGTACAGTCAGATCGGACTCATATGTGCTCCATGCAGGAGATTGTGATTGGGTTGGCTAAAAACATGCGATGTATTATCCATTAAGTTGAAC 275 21192184 0.983545622 23 256 1974 0.932400932 1.397940009 0.282051282 0.392727273 0.610722611 275 14 15 400 2R:21192096-21192227 7 293 1722 FBgn0003891 6434.526667 87.37 133.74 0.045535595 3.353553851 2.190818005 -6 -6 -6 0.01 dme-miR-252-5p 6mer3-8 GTACTT 2R 21192672 21192677 + 2R_21192672_21192677_+ 1 0.603169147 0.801584573 0.28060182 tud FBtr0342870|FBtr0071582 21192125|21192125 21192913|21192913 2R + 21192660 21192702 3'utr tud FlyBase G17943.1 ATAACTGTATTTGTACTTTCTTTTCTCGATTAACCAACTGAAG 9 21192679 0.659397589 4 7 86 0.785714286 1.041392685 0.071428571 0.444444444 0.642857143 9 3 0 11 2R:21192660-21192702 6 tud FBtr0342870|FBtr0071582 21192125|21192125 21192913|21192913 GTACTT 6mer3-8 dme-miR-252-5p 2R + 21192647 21192710 3'utr tud FlyBase G13664.1 ATTTTTTCCCTTTATAACTGTATTTGTACTTTCTTTTCTCGATTAACCAACTGAAGAATCACAT 12 21192689 0.985546015 8 10 117 0.833333333 1.176091259 0.166666667 0.416666667 0.611111111 12 3 0 15 2R:21192647-21192710 6 7 1723 FBgn0003891 6434.526667 87.37 133.74 0.001087881 0.080119034 0.052340362 -7 -17 -12 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 21290965 21290970 - 2R_21290965_21290970_- 1 0.99966083 0.999830415 0.000239851 CG30392 FBtr0071618 21290912 21291285 2R - 21290908 21291036 3'utr CG30392 FlyBase G25441.1 AAGACGTAAGTTTTAATTTTGCATTTTGAATTGCCTGCAATCGCTCATCTATCGCCTTGTCCACAGGCTGTGCAATATTTCCAAAATCCCCCGTATTTTAACGCCATTAAAGCTTTAGTCATGAATGAA 59 21290979 0.771781535 15 54 541 0.926470588 1.322219295 0.058823529 0.13559322 0.25 59 3 2 63 2R:21290908-21291036 6 CG30392 FBtr0071618 21290912 21291285 GCTGTG 6mer2-7 dme-miR-1008-3p 2R - 21290942 21291087 3'utr CG30392 FlyBase G19245.1 TGTAGCTAAAATTTTCTGTATTGATTGTGTAACTGCAAGTATTCGTTTCCTAAGACGTAAGTTTTAATTTTGCATTTTGAATTGCCTGCAATCGCTCATCTATCGCCTTGTCCACAGGCTGTGCAATATTTCCAAAATCCCCCGTA 44 21290979 0.990112018 19 38 376 0.896551724 1.238882089 0.137931034 0.25 0.431034483 44 4 2 52 2R:21290942-21291087 6 33 1724 FBgn0050392 270.5033333 29.71666667 45.16666667 0.1219948 1.110487942 0.730627306 9 9 9 0.01 dme-miR-8-3p 6mer2-7 AGTATT 2R 21291045 21291050 - 2R_21291045_21291050_- 1 1 1 0 CG30392 FBtr0342889|FBtr0071618 21290912|21290912 21291285|21291285 2R - 21291040 21291081 3'utr CG30392 FlyBase G25442.1 TAAAATTTTCTGTATTGATTGTGTAACTGCAAGTATTCGTTT 14 21291064 0.671440816 6 14 149 1 1.301029996 0 0.285714286 0.5 14 0 0 20 2R:21291040-21291081 6 CG30392 FBtr0071618|FBtr0342889 21290912|21290912 21291285|21291285 AGTATT 6mer2-7 dme-miR-8-3p 2R - 21290942 21291087 3'utr CG30392 FlyBase G19245.1 TGTAGCTAAAATTTTCTGTATTGATTGTGTAACTGCAAGTATTCGTTTCCTAAGACGTAAGTTTTAATTTTGCATTTTGAATTGCCTGCAATCGCTCATCTATCGCCTTGTCCACAGGCTGTGCAATATTTCCAAAATCCCCCGTA 44 21291063 0.990112018 19 38 376 0.896551724 1.238882089 0.137931034 0.25 0.431034483 44 4 2 52 2R:21290942-21291087 6 5 1725 FBgn0050392 270.5033333 29.71666667 45.16666667 0.018484061 0.168255749 0.110701107 14 13 13.5 0.01 dme-miR-8-3p 8mer-A1 CAGTATTA 2R 21309176 21309183 + 2R_21309176_21309183_+ 0.671698124 0.671698124 0.671698124 0 CG42672 FBtr0302702|FBtr0302703|FBtr0302704|FBtr0344188 21308996|21308996|21308996|21308996 21309434|21309434|21309434|21309434 2R + 21309134 21309187 3'utr CG42672 FlyBase G17967.1 CGATTTCTCGTATTACTTGTTTTATTCTTGCTTTGTCATGGTCAGTATTATTGA 15 21309175 0.990778344 6 14 150 0.947368421 0.954242509 0.368421053 0.266666667 0.421052632 15 0 1 18 2R:21309134-21309187 8 CG42672 FBtr0344188|FBtr0302704|FBtr0302703|FBtr0302702 21308996|21308996|21308996|21308996 21309434|21309434|21309434|21309434 CAGTATTA 8mer-A1 dme-miR-8-3p 2R + 21309127 21309188 3'utr CG42672 FlyBase G13682.1 CGAAACACGATTTCTCGTATTACTTGTTTTATTCTTGCTTTGTCATGGTCAGTATTATTGAC 16 21309175 0.993024053 7 14 169 0.826086957 1.278753601 0.347826087 0.4375 0.608695652 16 4 0 19 2R:21309127-21309188 8 14 1726 FBgn0261554 652.3633333 14.67 22.79 0.021460434 0.954328562 0.61430452 1 1 1 0.01 dme-miR-12-5p 8mer-A1 AATACTCA 2R 21319412 21319419 + 2R_21319412_21319419_+ 0.643927074 0.604651358 0.624289216 0.027772114 CG9485 FBtr0310327|FBtr0071599|FBtr0071601|FBtr0300395|FBtr0300394|FBtr0071600 21319401|21319401|21319401|21319401|21319401|21319401 21319569|21319569|21319569|21319569|21319569|21319569 2R + 21319403 21319445 3'utr CG9485 FlyBase G17973.1 ACCACCGTAAATACTCATATTCAAACCTGTTAGTTGCTACCAA 17 21319432 0.921745471 9 16 121 0.952380952 1.301029996 0.19047619 0.176470588 0.333333333 17 1 0 20 2R:21319403-21319445 8 CG9485 FBtr0300394|FBtr0071600|FBtr0071601|FBtr0300395|FBtr0310327|FBtr0071599 21319401|21319401|21319401|21319401|21319401|21319401 21319569|21319569|21319569|21319569|21319569|21319569 AATACTCA 8mer-A1 dme-miR-12-5p 2R + 21319402 21319444 3'utr CG9485 FlyBase G13685.1 AACCACCGTAAATACTCATATTCAAACCTGTTAGTTGCTACCA 7 21319433 0.983928252 5 7 53 1 0.903089987 0 0.142857143 0.25 7 0 0 8 2R:21319402-21319444 8 9.5 1727 FBgn0034618 1036.04 24.30333333 37.13 0.00916953 0.390892882 0.255857797 -20 -21 -20.5 0.01 dme-miR-14-3p 6mer2-7 AGACTG 2R 21336209 21336214 + 2R_21336209_21336214_+ 1 1 1 0 dom FBtr0071604 21336064 21336986 2R + 21335998 21336277 stop_codon dom FlyBase G18016.1 CTAGCTCATCAGCAGCAGTCAGTGGTGTTTCGGGAGGAAATGCCTCCTCGAGCGGAACAGCCAGGTGATGATGTTCACTATCATACCTCAGTCAGTATTATCAGCTGTGTGTGTTGTGTGCGTTTTAGTGGGCGACTAATTATCTGTGGGGAGACGGGTCCTTCCCCGGCTGTTACTGCTGCCAGGCGACTGATGCATAATGAGTATTTATAGACTGTAACAAGTTTCCTTCTATCGTATGAGATAAGTTAGTTAGGCGCCGGAACCCACGCTAGAATCT 341 21336207 0.983059955 42 324 2466 0.955607477 2.310693312 0.119158879 0.211143695 0.371495327 341 18 1 409 2R:21335998-21336277 6 dom FBtr0071604 21336064 21336986 AGACTG 6mer2-7 dme-miR-14-3p 2R + 21336123 21336299 3'utr dom FlyBase G13724.2 TAGTGGGCGACTAATTATCTGTGGGGAGACGGGTCCTTCCCCGGCTGTTACTGCTGCCAGGCGACTGATGCATAATGAGTATTTATAGACTGTAACAAGTTTCCTTCTATCGTATGAGATAAGTTAGTTAGGCGCCGGAACCCACGCTAGAATCTAGAATAACAAATTAAACTTCAT 176 21336207 0.888485132 26 162 1215 0.922509225 1.795880017 0.084870849 0.392045455 0.605166052 176 18 3 250 2R:21336123-21336299 6 193 1728 FBgn0020306 6085.363333 78.23 120.3133333 0.031715444 2.467084239 1.604144733 2 2 2 0.01 dme-miR-1012-3p 8mer-A1 TTGACTAA 2R 21336851 21336858 + 2R_21336851_21336858_+ 0.627007348 0.627007189 0.627007269 7.07E-08 dom FBtr0071604 21336064 21336986 2R + 21336814 21336877 3'utr dom FlyBase G18019.1 AATGGAACATTAACAATCTAAAGACTATGAGCATAGATTGACTAACCAATAAGACACAGAACTC 29 21336842 0.692505155 5 25 139 0.921052632 1.544068044 0.315789474 0.310344828 0.473684211 29 3 0 35 2R:21336814-21336877 8 dom FBtr0071604 21336064 21336986 TTGACTAA 8mer-A1 dme-miR-1012-3p 2R + 21336791 21336877 3'utr dom FlyBase G13725.1 AATTTATTTTGTACTCTAACCTAAATGGAACATTAACAATCTAAAGACTATGAGCATAGATTGACTAACCAATAAGACACAGAACTC 24 21336841 0.965206843 6 22 124 0.942857143 1.51851394 0.142857143 0.333333333 0.542857143 24 2 0 33 2R:21336791-21336877 8 16 1729 FBgn0020306 6085.363333 78.23 120.3133333 0.00262926 0.204525118 0.132986092 9 10 9.5 0.01 dme-bantam-3p 8mer-A1 TGATCTCA 2R 21341389 21341396 + 2R_21341389_21341396_+ 0.631136385 0.631136385 0.631136385 0 dom FBtr0342890|FBtr0071603 21341126|21341126 21341847|21341847 2R + 21341362 21341655 stop_codon dom FlyBase G18032.2 CAGTCAATCAGCCCGTCATTGCTAAATTGATCTCAATTTCTGTCGATTGGTTTTGCAGCCATGAGCGATCTAACTGTTCTGGAGGATTGTGAGCTCAAGGTGAAACGCTGAAGATTACAACGATGATCGCTTCAATCAGCTCAAGGCATGGAAGCCGTATTACTAATTTTACTGATCCTTAGATATAGCACCTTAGCTTAAGTGAAATTTCATTGTATCTATTCATATTACGAGAATAGTTTTAAGGAAGTGTAGGTGGAGTGCCTAGTGTGTAGGCTAACTGCTTTAAATTCA 265 21341388 0.877750261 45 254 2351 0.957928803 1.994170456 0.090614887 0.15530303 0.278317152 264 11 2 296 2R:21341362-21341655 8 dom FBtr0071603|FBtr0342890 21341126|21341126 21341847|21341847 TGATCTCA 8mer-A1 dme-bantam-3p 2R + 21341348 21341497 stop_codon dom FlyBase G13736.1 ATCAGTCAGTCAGTCAGTCAATCAGCCCGTCATTGCTAAATTGATCTCAATTTCTGTCGATTGGTTTTGCAGCCATGAGCGATCTAACTGTTCTGGAGGATTGTGAGCTCAAGGTGAAACGCTGAAGATTACAACGATGATCGCTTCAAT 173 21341388 0.989425342 18 160 1550 0.921259843 2.369215857 0.062992126 0.323699422 0.539370079 173 20 0 234 2R:21341348-21341497 8 179 1730 FBgn0020306 6085.363333 78.23 120.3133333 0.029414842 2.28812476 1.487781903 1 1 1 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2R 21341789 21341794 + 2R_21341789_21341794_+ 1 1 1 0 dom FBtr0342890|FBtr0071602|FBtr0071603 21341126|21341424|21341126 21341847|21341847|21341847 2R + 21341691 21341799 3'utr dom FlyBase G18033.1 CTATTCCCGTAGAGCAGTATGTACATTGGTAAATCTAATTCAGATCTATCAGATACTACATAAACACACCTAATATGTAGCTATAACTAAATGTCCTTTCTAGTTGTAT 19 21341787 0.986855854 9 17 154 0.913043478 1.322219295 0.173913043 0.210526316 0.347826087 19 2 0 21 2R:21341691-21341799 6 dom FBtr0071603|FBtr0342890|FBtr0071602 21341126|21341126|21341424 21341847|21341847|21341847 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 21341698 21341799 3'utr dom FlyBase G13738.1 CGTAGAGCAGTATGTACATTGGTAAATCTAATTCAGATCTATCAGATACTACATAAACACACCTAATATGTAGCTATAACTAAATGTCCTTTCTAGTTGTAT 15 21341788 0.988854569 8 14 131 0.944444444 1.230448921 0.333333333 0.2 0.333333333 15 1 0 17 2R:21341698-21341799 6 7 1731 FBgn0020306 6085.363333 78.23 120.3133333 0.001150301 0.089479739 0.058181415 2 1 1.5 0.01 dme-miR-1002-5p 6mer3-8 CTACTT 2R 21355075 21355080 - 2R_21355075_21355080_- 0.992869884 0.999999811 0.996434848 0.005041601 cv-2 FBtr0071610 21355013 21356005 2R - 21355048 21355096 3'utr cv-2 FlyBase G25470.1 AATAACTCTTTATATACTACTTGTATGGCTGGAACTGTAAGTTTACGAT 5 21355082 0.987447398 4 5 50 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2R:21355048-21355096 6 cv-2 FBtr0071610 21355013 21356005 CTACTT 6mer3-8 dme-miR-1002-5p 2R - 21355058 21355082 3'utr cv-2 FlyBase G19262.1 TACTACTTGTATGGCTGGAACTGTA 5 21355075 0.634511094 2 3 34 0.555555556 0.698970004 0 0.6 0.777777778 5 4 0 5 2R:21355058-21355082 6 5 1732 FBgn0000395 482.9966667 13.41666667 20.45666667 0.010352038 0.372670807 0.244419097 2 -5 -1.5 0.01 dme-miR-263a-5p 7mer-m1 TGCCATT 2R 21355152 21355158 - 2R_21355152_21355158_- 0.765586663 0.765586663 0.765586663 0 cv-2 FBtr0071610 21355013 21356005 2R - 21355135 21355203 3'utr cv-2 FlyBase G25471.1 CAGCTAATTATGCACCTAACCGGCGGAAAGGAGGAGTCAGCTCTTTGCCATTTTTCGATTCTACAAATT 8 21355152 0.966570076 6 8 47 1 0.903089987 0 0 0 8 0 0 8 2R:21355135-21355203 7 cv-2 FBtr0071610 21355013 21356005 TGCCATT 7mer-m1 dme-miR-263a-5p 2R - 21355152 21355183 3'utr cv-2 FlyBase G19263.1 CGGCGGAAAGGAGGAGTCAGCTCTTTGCCATT 6 21355159 0.975610347 2 4 27 0.625 0.698970004 0.25 0.333333333 0.5 6 3 0 5 2R:21355152-21355183 6 4.5 1733 FBgn0000395 482.9966667 13.41666667 20.45666667 0.009316834 0.335403727 0.219977188 -6 1 -2.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 2R 21355536 21355541 - 2R_21355536_21355541_- 1 1 1 0 cv-2 FBtr0071610 21355013 21356005 2R - 21355505 21355638 3'utr cv-2 FlyBase G25474.1 TTATCCGGAGATCCTGTTGTTGCTTGTGTGCCTGTTTTGTATTTGTATTTGTATTTGTACTACTATATGTGTGTTTCGTCGCTGCGCTAAACTAAACTGATCTAAAAACTATAACTATAATTATAACTATAACT 52 21355541 0.849850421 13 46 396 0.861538462 1.447158031 0.307692308 0.192307692 0.353846154 52 8 1 56 2R:21355505-21355638 6 cv-2 FBtr0071610 21355013 21356005 TGATCT 6mer3-8 dme-bantam-3p 2R - 21355522 21355638 3'utr cv-2 FlyBase G19265.1 TTATCCGGAGATCCTGTTGTTGCTTGTGTGCCTGTTTTGTATTTGTATTTGTATTTGTACTACTATATGTGTGTTTCGTCGCTGCGCTAAACTAAACTGATCTAAAAACTATAACTA 34 21355541 0.831257545 13 33 259 0.97826087 1.653212514 0.347826087 0.323529412 0.5 34 1 0 45 2R:21355522-21355638 6 26 1734 FBgn0000395 482.9966667 13.41666667 20.45666667 0.053830599 1.937888199 1.270979306 0 0 0 0.01 dme-miR-999-3p 7mer-m8 AGTTAAC 2R 21486857 21486863 + 2R_21486857_21486863_+ 0.674514267 0.674514267 0.674514267 0 Sara FBtr0071641 21486704 21487107 2R + 21486826 21486905 3'utr Sara FlyBase G18067.1 ATGAGGACATGTTGGTATTGTTGGATGGCTCAGTTAACTGTGTATATATTTAAGTAGCTCATCGTTTGGTTTTTGTCTAT 33 21486860 0.648207506 17 30 342 0.918918919 1.531478917 0.162162162 0.121212121 0.216216216 33 3 0 34 2R:21486826-21486905 7 Sara FBtr0071641 21486704 21487107 AGTTAAC 7mer-m8 dme-miR-999-3p 2R + 21486808 21486909 3'utr Sara FlyBase G13761.1 GAGTCCATGGGGCAAGAAATGAGGACATGTTGGTATTGTTGGATGGCTCAGTTAACTGTGTATATATTTAAGTAGCTCATCGTTTGGTTTTTGTCTATACAT 15 21486837 0.988138844 11 15 141 1 1.361727836 0.217391304 0.4 0.608695652 15 0 0 23 2R:21486808-21486909 7 10.5 1735 FBgn0026369 1340.356667 34.97 53.53333333 0.007833736 0.300257363 0.196139477 -3 20 8.5 0.01 dme-miR-11-3p 7mer-m1 TGTGATG 2R 21487034 21487040 + 2R_21487034_21487040_+ 0.535593563 0.535593563 0.535593563 0 Sara FBtr0071641 21486704 21487107 2R + 21486991 21487082 3'utr Sara FlyBase G18069.1 AAGTAAAACGTATCTAAGAAACCTAAATATATATATATTTGTATGTGATGTTCTTTAATATGCTTTACACATTTACCACTCGAGTATATATG 26 21487031 0.994925881 9 22 300 0.9 0.954242509 0.066666667 0.153846154 0.266666667 26 1 2 27 2R:21486991-21487082 7 Sara FBtr0071641 21486704 21487107 TGTGATG 7mer-m1 dme-miR-11-3p 2R + 21487007 21487083 3'utr Sara FlyBase G13762.1 AGAAACCTAAATATATATATATTTGTATGTGATGTTCTTTAATATGCTTTACACATTTACCACTCGAGTATATATGA 18 21487030 0.992858473 9 16 210 0.821428571 0.884606581 0.178571429 0.388888889 0.607142857 18 3 2 23 2R:21487007-21487083 7 18 1736 FBgn0026369 1340.356667 34.97 53.53333333 0.013429261 0.514726909 0.336239103 3 4 3.5 0.01 dme-miR-305-5p 7mer-m1 GTACAAT 2R 21487370 21487376 - 2R_21487370_21487376_- 0.765586663 0.765586663 0.765586663 0 Fkbp14 FBtr0300397|FBtr0342897|FBtr0342896|FBtr0071703|FBtr0306013 21487165|21487165|21487165|21487165|21487165 21487665|21487665|21487665|21487665|21487665 2R - 21487334 21487440 3'utr Fkbp14 FlyBase G25504.1 ATTAGAGGAGTGCATTAGTAGTTTGTGTGTCTGTAACCCCGGTACTAGACGTAGTTTAAATTATGTACAATCTGAGAGAGAATGAACATCATTTTTATATACATTTA 90 21487358 0.939522629 15 84 573 0.942307692 1.991226076 0.182692308 0.144444444 0.259615385 90 6 0 98 2R:21487334-21487440 7 Fkbp14 FBtr0071703|FBtr0306013|FBtr0342897|FBtr0342896|FBtr0300397 21487165|21487165|21487165|21487165|21487165 21487665|21487665|21487665|21487665|21487665 GTACAAT 7mer-m1 dme-miR-305-5p 2R - 21487320 21487421 3'utr Fkbp14 FlyBase G19287.1 AGTTTGTGTGTCTGTAACCCCGGTACTAGACGTAGTTTAAATTATGTACAATCTGAGAGAGAATGAACATCATTTTTATATACATTTATAGGTTGTTATATA 55 21487358 0.980377846 14 51 365 0.891566265 1.568201724 0.168674699 0.345454545 0.56626506 55 8 1 74 2R:21487320-21487421 7 36.5 1737 FBgn0010470 1256.333333 117.3933333 179.62 0.029052799 0.310920552 0.20320677 -18 -18 -18 0.01 dme-miR-2a-2-5p 7mer-m1 GATGAGG 2R 21487554 21487560 - 2R_21487554_21487560_- 0.825582373 0.825582373 0.825582373 0 Fkbp14 FBtr0300397|FBtr0342897|FBtr0342896|FBtr0071703|FBtr0306013 21487165|21487165|21487165|21487165|21487165 21487665|21487665|21487665|21487665|21487665 2R - 21487442 21487581 3'utr Fkbp14 FlyBase G25505.1 AAAAATAGAACATATACAACAGATGAGGCACGAGCCGAGCAATAAATCGAGTGCAACCAAATGCTTCCCGATGTCATTTTGTATATAGCATACATATCAGCATCAGCATCAGCATCTGCATCTGCATCTAAACACCAACA 121 21487558 0.993367532 14 119 293 0.993197279 2.164352856 0.013605442 0.181818182 0.326530612 121 1 0 146 2R:21487442-21487581 7 Fkbp14 FBtr0071703|FBtr0306013|FBtr0342897|FBtr0342896|FBtr0300397 21487165|21487165|21487165|21487165|21487165 21487665|21487665|21487665|21487665|21487665 GATGAGG 7mer-m1 dme-miR-2a-2-5p 2R - 21487459 21487581 3'utr Fkbp14 FlyBase G19288.1 AAAAATAGAACATATACAACAGATGAGGCACGAGCCGAGCAATAAATCGAGTGCAACCAAATGCTTCCCGATGTCATTTTGTATATAGCATACATATCAGCATCAGCATCAGCATCTGCATCT 58 21487558 0.982340569 8 53 142 0.923913043 1.452297671 0 0.413793103 0.630434783 58 5 2 85 2R:21487459-21487581 7 68 1738 FBgn0010470 1256.333333 117.3933333 179.62 0.054125763 0.579249248 0.378576996 -2 -2 -2 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA 2R 21512684 21512689 + 2R_21512684_21512689_+ 1 1 1 0 MESK2 FBtr0089710|FBtr0089703 21512447|21512447 21512725|21512725 2R + 21512570 21512706 3'utr MESK2 FlyBase G18084.1 ACGCACACACAAAGTACACAAACGTCCCTGACCCAACCTGATTTTAGTCTAAACGAAAATCTTTGAGAATCAAAAGCTTTTTGAGATGCATTGAAACGAAACCAAAAATCTATTGTGCAAAATTTTATATTTACAAA 125 21512682 0.957945587 18 121 707 0.972413793 2.149219113 0.034482759 0.128 0.248275862 125 4 0 141 2R:21512570-21512706 6 MESK2 FBtr0089703|FBtr0089710 21512447|21512447 21512725|21512725 GTGCAA 6mer3-8 dme-miR-92b-3p 2R + 21512575 21512706 3'utr MESK2 FlyBase G13772.1 CACACAAAGTACACAAACGTCCCTGACCCAACCTGATTTTAGTCTAAACGAAAATCTTTGAGAATCAAAAGCTTTTTGAGATGCATTGAAACGAAACCAAAAATCTATTGTGCAAAATTTTATATTTACAAA 90 21512682 0.952035687 13 89 496 0.992424242 2.117271296 0.068181818 0.344444444 0.553030303 90 1 0 131 2R:21512575-21512706 6 49 1739 FBgn0043070 584.3833333 29.10666667 44.48666667 0.083849072 1.683463124 1.101453619 2 2 2 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 2R 21605707 21605712 - 2R_21605707_21605712_- 0.994974671 0.867157583 0.931066127 0.090380338 CG10433 FBtr0071690|FBtr0344882|FBtr0071691 21605674|21605674|21605674 21606071|21606071|21606325 2R - 21605679 21605797 3'utr CG10433 FlyBase G25520.1 TTAACTATATGTATATTAATTATATTGTACGAATAATTTTGTATGACATCTTAAGAGCCCCAAATCTACCCACAATGTGAAATATTTGACTGCTTCCAATAAATGCATTGTAAATATTT 53 21605712 0.983568705 15 51 406 0.942028986 1.812913357 0.507246377 0.264150943 0.434782609 53 4 0 65 2R:21605679-21605797 6 CG10433 FBtr0071691|FBtr0344882|FBtr0071690 21605674|21605674|21605674 21606325|21606071|21606071 TTGACT 6mer3-8 dme-miR-1012-3p 2R - 21605676 21605759 3'utr CG10433 FlyBase G19305.1 TTGTATGACATCTTAAGAGCCCCAAATCTACCCACAATGTGAAATATTTGACTGCTTCCAATAAATGCATTGTAAATATTTTCC 44 21605704 0.831555834 13 42 297 0.970149254 1.511883361 0.447761194 0.363636364 0.582089552 44 1 1 65 2R:21605676-21605759 6 39.5 1740 FBgn0034638 6526.64 846.7433333 1285.906667 0.006052119 0.046649319 0.030717626 0 -8 -4 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2R 21606062 21606068 - 2R_21606062_21606068_- 0.808818836 0.808818836 0.808818836 0 CG10433 FBtr0071691|FBtr0071691 21605674|21605674 21606325|21606325 2R - 21606017 21606174 stop_codon CG10433 FlyBase G25523.1 CTGTGCGGAACACCTGGGACAGTGCATGGACCGATGCCACCAGAGGCTCCTGCGACCCGGTTCGGATTGCAAGAATGGCCAAGTCTGCTGCGTCCTGATTTAGTTATACTTAACCACACCATACACATACCCGTGCAGAGGAACAGCATCGTCAAATG 52 21606078 0.976479716 16 49 320 0.966101695 1.755874856 0.152542373 0.115384615 0.220338983 52 2 0 57 2R:21606017-21606174 7 CG10433 FBtr0071691|FBtr0071691 21605674|21605674 21606325|21606325 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2R - 21606061 21606103 stop_codon CG10433 FlyBase G19307.1 AGAATGGCCAAGTCTGCTGCGTCCTGATTTAGTTATACTTAAC 14 21606078 0.738780726 5 13 120 0.92 1.361727836 0.12 0.571428571 0.76 14 2 0 23 2R:21606061-21606103 7 9 1741 FBgn0034638 6526.64 846.7433333 1285.906667 0.001378964 0.010628959 0.006998953 10 10 10 0.01 dme-miR-92b-3p 6mer2-7 TGCAAT 2R 21614881 21614886 - 2R_21614881_21614886_- 1 1 1 0 CG18870 FBtr0071688|FBtr0345664 21614761|21613843 21615593|21615593 2R - 21614852 21614965 3'utr CG18870 FlyBase G25531.1 TCAATTTCGAGTATAAGATGTAGGCGCATACGCTCACAAGATAATGTACGAACTACAGTATTTACTCCACACATGTAACTGCAATGTAACTGAAAGTTCGGGCTAGTGGTCAGT 21 21614881 0.969143481 8 21 115 1 1.380211242 0.125 0.095238095 0.208333333 21 0 0 24 2R:21614852-21614965 6 CG18870 FBtr0345664|FBtr0071688 21613843|21614761 21615593|21615593 TGCAAT 6mer2-7 dme-miR-92b-3p 2R - 21614856 21614976 3'utr CG18870 FlyBase G19310.1 GTGTCAATTGTTCAATTTCGAGTATAAGATGTAGGCGCATACGCTCACAAGATAATGTACGAACTACAGTATTTACTCCACACATGTAACTGCAATGTAACTGAAAGTTCGGGCTAGTGGT 22 21614881 0.968206536 9 20 120 0.9 1.431363764 0.2 0.272727273 0.466666667 22 3 0 27 2R:21614856-21614976 6 12.5 1742 FBgn0042180 173 9.316666667 14.31333333 0.072254335 1.341681574 0.873311598 -5 -5 -5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG 2R 21615068 21615074 - 2R_21615068_21615074_- 0.70297214 0.70297214 0.70297214 0 CG18870 FBtr0071688|FBtr0345664 21614761|21613843 21615593|21615593 2R - 21615043 21615102 3'utr CG18870 FlyBase G25533.1 AAGACTGGGCCGAGCATTCCACATAGTTGTACCTGTTTCTGTACTGCATAGATATGTATA 155 21615075 0.744084706 10 148 1397 0.948186528 2.26245109 0.062176166 0.2 0.357512953 155 10 0 183 2R:21615043-21615102 7 CG18870 FBtr0345664|FBtr0071688 21613843|21614761 21615593|21615593 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" 2R - 21615044 21615102 3'utr CG18870 FlyBase G19312.1 AAGACTGGGCCGAGCATTCCACATAGTTGTACCTGTTTCTGTACTGCATAGATATGTAT 113 21615075 0.901522729 8 109 993 0.957575758 1.897627091 0.096969697 0.336283186 0.545454545 113 6 1 158 2R:21615044-21615102 7 129.5 1743 FBgn0042180 173 9.316666667 14.31333333 0.748554913 13.89982111 9.047508151 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 21619648 21619653 - 2R_21619648_21619653_- 1 1 1 0 PTP-ER FBtr0071686 21619319 21620046 2R - 21619601 21619677 3'utr PTP-ER FlyBase G25548.2 AATTATTATACCCTACCTTACCTTACCAAAACCATACCTTACCATAAAGATGCGCATCTATATATGACTCGCGACGT 26 21619627 0.861228897 10 22 159 0.8 0.970036777 0 0.346153846 0.514285714 26 5 2 28 2R:21619601-21619677 6 PTP-ER FBtr0071686 21619319 21620046 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 21619612 21619673 3'utr PTP-ER FlyBase G19320.1 ATTATACCCTACCTTACCTTACCAAAACCATACCTTACCATAAAGATGCGCATCTATATATG 17 21619660 0.796097938 7 16 101 0.952380952 1.301029996 0 0.235294118 0.380952381 17 1 0 20 2R:21619612-21619673 6 12 1744 FBgn0016641 329.97 7.83 11.97333333 0.036366942 1.53256705 1.002227171 -26 7 -9.5 0.01 dme-miR-277-3p 6mer3-8 TGCATT 2R 21631123 21631128 + 2R_21631123_21631128_+ 1 1 1 0 mahj FBtr0304728|FBtr0071658 21630876|21630876 21631422|21631276 2R + 21631081 21631177 3'utr mahj FlyBase G18104.1 ATTTTTGAATTTTGTACAAATCAAATACGAATGCCGCAGGATTGCATTAAAGCCAGCTAAAGATTATTAAAGAGATCGCATAATGAGTACCAACTGT 35 21631127 0.826716667 8 35 189 1 1.62324929 0.095238095 0.142857143 0.285714286 35 0 0 42 2R:21631081-21631177 6 mahj FBtr0304728|FBtr0071658 21630876|21630876 21631422|21631276 TGCATT 6mer3-8 dme-miR-277-3p 2R + 21631085 21631145 3'utr mahj FlyBase G13789.1 TTGAATTTTGTACAAATCAAATACGAATGCCGCAGGATTGCATTAAAGCCAGCTAAAGATT 19 21631127 0.743143861 3 19 95 1 1.447158031 0.142857143 0.368421053 0.571428571 19 0 0 28 2R:21631085-21631145 6 17.5 1745 FBgn0034641 1067.043333 24.44 37.54 0.016400459 0.71603928 0.466169419 -4 -4 -4 0.01 dme-miR-305-5p 6mer2-7 GTACAA 2R 21631215 21631220 + 2R_21631215_21631220_+ 1 1 1 0 mahj FBtr0304728|FBtr0071658 21630876|21630876 21631422|21631276 2R + 21631187 21631231 3'utr mahj FlyBase G18105.1 ATCTATAAATTGTTTAACAATTTTCATTGTACAAGCCTGAATAAA 6 21631213 0.983126183 3 5 40 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 2R:21631187-21631231 6 mahj FBtr0304728|FBtr0071658 21630876|21630876 21631422|21631276 GTACAA 6mer2-7 dme-miR-305-5p 2R + 21631188 21631228 3'utr mahj FlyBase G13790.1 TCTATAAATTGTTTAACAATTTTCATTGTACAAGCCTGAAT 5 21631213 0.983945263 2 5 40 1 0.84509804 0.285714286 0.2 0.428571429 5 0 0 7 2R:21631188-21631228 6 4.5 1746 FBgn0034641 1067.043333 24.44 37.54 0.004217261 0.184124386 0.119872136 2 2 2 0.01 dme-miR-305-3p 7mer-A1 TGTGCCA 2R 21638217 21638223 + 2R_21638217_21638223_+ 0.782907748 0.782453606 0.782680677 0.000321097 CG10321 FBtr0071660|FBtr0330228 21637910|21637970 21638399|21638399 2R + 21638138 21638235 3'utr CG10321 FlyBase G18127.1 AGCAGATACGAAACTTTAGGTAGGCAGATCGAGGCGGATCCTCACATCCAAACGCTTGGGGCATAAATCCTGCGTGGACTGTGCCAGTTTTTGTTTTT 71 21638219 0.882143491 10 69 374 0.974683544 1.58546073 0.17721519 0.098591549 0.189873418 71 1 1 77 2R:21638138-21638235 7 CG10321 FBtr0330228|FBtr0071660 21637970|21637910 21638399|21638399 TGTGCCA 7mer-A1 dme-miR-305-3p 2R + 21638131 21638236 3'utr CG10321 FlyBase G13803.1 TTTTGTAAGCAGATACGAAACTTTAGGTAGGCAGATCGAGGCGGATCCTCACATCCAAACGCTTGGGGCATAAATCCTGCGTGGACTGTGCCAGTTTTTGTTTTTA 54 21638219 0.764653944 12 52 272 0.952380952 1.425968732 0.30952381 0.388888889 0.607142857 54 2 2 80 2R:21638131-21638236 7 43.5 1747 FBgn0034643 611.73 22.34 34.24 0.071109803 1.947179946 1.270443925 -2 -2 -2 0.01 dme-miR-14-3p 6mer2-7 AGACTG 2R 21638281 21638286 + 2R_21638281_21638286_+ 1 1 1 0 CG10321 FBtr0071660|FBtr0330228 21637910|21637970 21638399|21638399 2R + 21638240 21638307 3'utr CG10321 FlyBase G18128.1 TTATTACCCTACTATTATTATTTTGTTTTCCCGGGGAATACAGACTGGCATTTTAGGCTAAACGTATT 104 21638278 0.986806351 7 100 705 0.965517241 2.049218023 0.086206897 0.105769231 0.198275862 104 4 0 112 2R:21638240-21638307 6 CG10321 FBtr0330228|FBtr0071660 21637970|21637910 21638399|21638399 AGACTG 6mer2-7 dme-miR-14-3p 2R + 21638240 21638341 3'utr CG10321 FlyBase G13804.1 TTATTACCCTACTATTATTATTTTGTTTTCCCGGGGAATACAGACTGGCATTTTAGGCTAAACGTATTTTGGCGTTGGGTTTTCATTGTTGGGCTTTGAAAT 62 21638278 0.980888622 9 58 407 0.943820225 1.924279286 0.134831461 0.370967742 0.561797753 62 5 0 84 2R:21638240-21638341 6 78 1748 FBgn0034643 611.73 22.34 34.24 0.127507234 3.491495076 2.278037383 3 3 3 0.01 dme-miR-305-5p 8mer-m1 AGTACAAT 2R 21657153 21657160 + 2R_21657153_21657160_+ 0.570363044 0.570363044 0.570363044 0 CG10082 FBtr0071661|FBtr0071662 21657072|21657072 21657935|21657428 2R + 21657087 21657186 3'utr CG10082 FlyBase G18152.1 ACCACATCGGGAGAAAAGAATATGAATATATATATGGGGCAACTGGGCGGGAACACACAAGTTAAAAGTACAATTTGATTTCAGAATACCTAAATTGTTG 48 21657161 0.972558346 13 46 271 0.95 1.45484486 0.116666667 0.1875 0.35 48 2 1 57 2R:21657087-21657186 8 CG10082 FBtr0071662|FBtr0071661 21657072|21657072 21657428|21657935 AGTACAAT 8mer-m1 dme-miR-305-5p 2R + 21657082 21657193 3'utr CG10082 FlyBase G13818.1 TAGAAACCACATCGGGAGAAAAGAATATGAATATATATATGGGGCAACTGGGCGGGAACACACAAGTTAAAAGTACAATTTGATTTCAGAATACCTAAATTGTTGTAGCAAC 43 21657161 0.941819812 12 42 228 0.966666667 1.763427994 0.1 0.279069767 0.483333333 43 2 0 58 2R:21657082-21657193 8 25 1749 FBgn0034644 417.2733333 12.82666667 19.61 0.059912767 1.949064449 1.274859765 -8 -8 -8 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2R 21657242 21657248 + 2R_21657242_21657248_+ 0.443131018 0.443131018 0.443131018 0 CG10082 FBtr0071661|FBtr0071662 21657072|21657072 21657935|21657428 2R + 21657231 21657305 3'utr CG10082 FlyBase G18153.2 GAAATTCAAAATGTGATTCAAGCAAACCTATTTAACAACCGGATATAGACCTTAACTTTTAACTTTTAACCGACG 22 21657271 0.786637742 7 17 157 0.84 1.021189299 0.12 0.136363636 0.24 22 3 1 21 2R:21657231-21657305 7 CG10082 FBtr0071662|FBtr0071661 21657072|21657072 21657428|21657935 TGTGATT 7mer-m1 dme-miR-308-3p 2R + 21657213 21657290 3'utr CG10082 FlyBase G13819.1 AAAATCAACTTATCTTTAGAAATTCAAAATGTGATTCAAGCAAACCTATTTAACAACCGGATATAGACCTTAACTTTT 19 21657262 0.976074933 9 16 107 0.846153846 0.643452676 0.115384615 0.315789474 0.5 19 0 4 22 2R:21657213-21657290 7 5 1750 FBgn0034644 417.2733333 12.82666667 19.61 0.011982553 0.38981289 0.254971953 -29 -20 -24.5 0.01 dme-miR-277-3p 6mer2-7 GCATTT 2R 21657354 21657359 + 2R_21657354_21657359_+ 1 1 1 0 CG10082 FBtr0071661|FBtr0071662 21657072|21657072 21657935|21657428 2R + 21657322 21657376 3'utr CG10082 FlyBase G18154.1 AGGGCGGAGCGTGTTTCCCCCGATTAATCGCAGCATTTGTGGAGAACCAGGAGCG 5 21657360 0.943789359 4 5 22 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 2R:21657322-21657376 6 CG10082 FBtr0071662|FBtr0071661 21657072|21657072 21657428|21657935 GCATTT 6mer2-7 dme-miR-277-3p 2R + 21657347 21657377 3'utr CG10082 FlyBase G13820.1 AATCGCAGCATTTGTGGAGAACCAGGAGCGG 6 21657358 0.958133549 3 4 15 0.8 0.602059991 0.3 0.333333333 0.6 6 1 1 8 2R:21657347-21657377 6 4 1751 FBgn0034644 417.2733333 12.82666667 19.61 0.009586043 0.311850312 0.203977562 -6 -4 -5 0.01 dme-miR-33-5p 8mer-A1 CAATGCAA 2R 21657623 21657630 + 2R_21657623_21657630_+ 0.634552243 0.634552243 0.634552243 0 CG10082 FBtr0071661 21657072 21657935 2R + 21657598 21657679 3'utr CG10082 FlyBase G18156.1 GATTTTATACCTAGCCATTACAATTCAATGCAAAATGACAAAGCGATAGAGCGTAATCATCAGTATTTCGTTGTATGTATCT 28 21657622 0.859954774 5 28 207 1 1.491361694 0.612903226 0.107142857 0.193548387 28 0 0 31 2R:21657598-21657679 8 CG10082 FBtr0071661 21657072 21657935 CAATGCAA 8mer-A1 dme-miR-33-5p 2R + 21657608 21657670 3'utr CG10082 FlyBase G13821.1 CTAGCCATTACAATTCAATGCAAAATGACAAAGCGATAGAGCGTAATCATCAGTATTTCGTTG 23 21657622 0.800931886 3 22 138 0.939393939 1.491361694 0.575757576 0.304347826 0.515151515 23 2 0 31 2R:21657608-21657670 8 14 1752 FBgn0034644 417.2733333 12.82666667 19.61 0.03355115 1.091476091 0.713921469 1 1 1 0.01 dme-miR-79-3p 6mer2-7 AGCTTT 2R 21665047 21665052 + 2R_21665047_21665052_+ 0.999946945 0.999900806 0.999923875 3.26E-05 CG42362 FBtr0345939|FBtr0299961 21664971|21664971 21666108|21666108 2R + 21665045 21665094 3'utr CG42362 FlyBase G18163.1 AGAGCTTTGAGGAAACTTGTACCCGAAATGATTTCATTAGTAAATAAATA 21 21665062 0.703485133 4 21 105 1 1.477121255 0.166666667 0.285714286 0.5 21 0 0 30 2R:21665045-21665094 6 CG42362 FBtr0299961|FBtr0345939 21664971|21664971 21666108|21666108 AGCTTT 6mer2-7 dme-miR-79-3p 2R + 21665046 21665084 3'utr CG42362 FlyBase G13827.1 GAGCTTTGAGGAAACTTGTACCCGAAATGATTTCATTAG 15 21665062 0.678526169 3 15 61 1 1.361727836 0.260869565 0.266666667 0.52173913 15 0 0 23 2R:21665046-21665084 6 4 1753 FBgn0259708 134.4466667 10.37333333 16 0.029751574 0.385604113 0.25 -15 -15 -15 0.01 dme-miR-988-3p 6mer3-8 ACAAGG 2R 21668814 21668819 - 2R_21668814_21668819_- 1 1 1 0 CG42379 FBtr0299991|FBtr0299990 21667539|21667539 21669216|21669216 2R - 21668777 21668925 3'utr CG42379 FlyBase G25580.1 AGCTTTCGGACCCATCTACTAATATCCGCCCTGCTGCGAATAGCTTTAATTTGCTACGGACAATTACACGACAGTCAGTCCGCCGTGCCCTACACCGATATAGACTACAAGGTGGTGACTGATGGAGCCCGTCAAGTTCTGGCTGGGGA 47 21668825 0.969281008 11 47 265 1 1.72427587 0.113207547 0.127659574 0.226415094 47 0 0 53 2R:21668777-21668925 6 CG42379 FBtr0299990|FBtr0299991 21667539|21667539 21669216|21669216 ACAAGG 6mer3-8 dme-miR-988-3p 2R - 21668776 21668837 3'utr CG42379 FlyBase G19342.1 CCTACACCGATATAGACTACAAGGTGGTGACTGATGGAGCCCGTCAAGTTCTGGCTGGGGAC 18 21668825 0.95444188 5 18 81 1 1.462397998 0.034482759 0.333333333 0.586206897 18 0 0 29 2R:21668776-21668837 6 22.5 1754 FBgn0259725 127.28 6.776666667 10.41 0.176775613 3.320216429 2.161383285 6 6 6 0.01 dme-miR-11-3p 7mer-m1 TGTGATG 2R 21692013 21692019 + 2R_21692013_21692019_+ 0.535541908 0.53550894 0.535525424 2.33E-05 CG42496 FBtr0300625|FBtr0342958 21691979|21691979 21692764|21692764 2R + 21691973 21692044 start_codon CG42496 FlyBase G18183.1 AGCAATAGCCGGCATTGTGAGCCATGAAACCCGAACGTAATGTGATGATAGCGGCCACCGGAAGTGTGGCCA 45 21692021 0.972963913 9 33 193 0.759259259 1.010723865 0.518518519 0.177777778 0.314814815 45 10 3 41 2R:21691973-21692044 7 CG42496 FBtr0342958|FBtr0300625 21691979|21691979 21692764|21692764 TGTGATG 7mer-m1 dme-miR-11-3p 2R + 21691977 21692058 start_codon CG42496 FlyBase G13838.1 ATAGCCGGCATTGTGAGCCATGAAACCCGAACGTAATGTGATGATAGCGGCCACCGGAAGTGTGGCCACCATTAAGTTAGCC 36 21692021 0.955417194 5 31 148 0.928571429 1.414973348 0.5 0.388888889 0.607142857 36 3 1 52 2R:21691977-21692058 7 35 1755 FBgn0260222 113.5 13.05 20.08333333 0.308370044 2.681992337 1.742738589 -8 -8 -8 0.01 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 21716636 21716643 + 2R_21716636_21716643_+ 0.625364269 0.625364269 0.625364269 0 HmgD FBtr0071709|FBtr0071708 21715879|21715879 21716727|21716727 2R + 21716482 21716689 3'utr HmgD FlyBase G18195.1 ACGAAAAACAATACACACACCGCAAATGAATCGAACGAAATTTCGCTCAGGTCTTTTCGTCATTTTGCATTAAACTTAATGTTTAACGTCTTGTTAGCTAAAGATGTATAGCAGAAGAGGAAGTCGGAAGTTAGATGAGACAAGCAGATGTAATTGCATTTAATCGGTAGTTTTAATTGATTACTATACGTACTATTTAAAGAGAAAA 561 21716635 0.989745973 24 546 5364 0.975688817 2.001445241 0.235008104 0.08912656 0.171799028 561 10 5 602 2R:21716482-21716689 8 HmgD FBtr0071709|FBtr0071708 21715879|21715879 21716727|21716727 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 21716590 21716663 3'utr HmgD FlyBase G13848.1 TAGCAGAAGAGGAAGTCGGAAGTTAGATGAGACAAGCAGATGTAATTGCATTTAATCGGTAGTTTTAATTGATT 304 21716635 0.975189149 13 291 2786 0.958963283 2.170261715 0.306695464 0.368421053 0.585313175 304 17 2 444 2R:21716590-21716663 8 394 1756 FBgn0004362 7189.043333 869.6 1331.753333 0.054805623 0.453081877 0.295850583 1 1 1 0.01 dme-miR-263a-5p 7mer-A1 TGCCATA 2R 21717256 21717262 - 2R_21717256_21717262_- 0.782911824 0.782911824 0.782911824 0 Tango11 FBtr0342965|FBtr0071747|FBtr0071746 21716778|21716778|21716778 21717417|21717417|21717417 2R - 21717235 21717384 3'utr Tango11 FlyBase G25606.1 TCTGCGCTGGGTGCCAAGACAACCACCTTGCTATGGACACCCTTTTTGGAACAGCTTCTTTCGTTTCTTGACTTTTGTGTTTCTTTTGTGGAAAGGCTCTGAGAGAGACTTTGTTTTTTGTTTGCCATAATTTTGTAGACTAAGCTCCGT 55 21717273 0.926836458 21 54 503 0.984126984 1.491361694 0.19047619 0.127272727 0.238095238 55 0 1 62 2R:21717235-21717384 7 Tango11 FBtr0071746|FBtr0071747|FBtr0342965 21716778|21716778|21716778 21717417|21717417|21717417 TGCCATA 7mer-A1 dme-miR-263a-5p 2R - 21717239 21717335 3'utr Tango11 FlyBase G19365.1 AACAGCTTCTTTCGTTTCTTGACTTTTGTGTTTCTTTTGTGGAAAGGCTCTGAGAGAGACTTTGTTTTTTGTTTGCCATAATTTTGTAGACTAAGCT 40 21717273 0.768185878 11 37 411 0.952380952 1.77815125 0.26984127 0.4 0.619047619 40 3 0 60 2R:21717239-21717335 7 7.5 1757 FBgn0050404 496.0066667 38.97333333 59.5 0.015120765 0.192439275 0.12605042 11 11 11 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 2R 21717304 21717309 - 2R_21717304_21717309_- 1 1 1 0 Tango11 FBtr0342965|FBtr0071747|FBtr0071746 21716778|21716778|21716778 21717417|21717417|21717417 2R - 21717235 21717384 3'utr Tango11 FlyBase G25606.1 TCTGCGCTGGGTGCCAAGACAACCACCTTGCTATGGACACCCTTTTTGGAACAGCTTCTTTCGTTTCTTGACTTTTGTGTTTCTTTTGTGGAAAGGCTCTGAGAGAGACTTTGTTTTTTGTTTGCCATAATTTTGTAGACTAAGCTCCGT 55 21717310 0.926836458 21 54 503 0.984126984 1.491361694 0.19047619 0.127272727 0.238095238 55 0 1 62 2R:21717235-21717384 6 Tango11 FBtr0071746|FBtr0071747|FBtr0342965 21716778|21716778|21716778 21717417|21717417|21717417 TGTGTT 6mer3-8 dme-miR-317-3p 2R - 21717239 21717335 3'utr Tango11 FlyBase G19365.1 AACAGCTTCTTTCGTTTCTTGACTTTTGTGTTTCTTTTGTGGAAAGGCTCTGAGAGAGACTTTGTTTTTTGTTTGCCATAATTTTGTAGACTAAGCT 40 21717310 0.768185878 11 37 411 0.952380952 1.77815125 0.26984127 0.4 0.619047619 40 3 0 60 2R:21717239-21717335 6 19.5 1758 FBgn0050404 496.0066667 38.97333333 59.5 0.039313988 0.500342114 0.327731092 1 1 1 0.01 dme-miR-970-3p 6mer2-7 CTTATG 2R 21723924 21723929 + 2R_21723924_21723929_+ 1 1 1 0 LBR FBtr0071712|FBtr0071713|FBtr0071711 21723656|21723656|21723656 21724055|21724055|21724055 2R + 21723894 21723958 3'utr LBR FlyBase G18209.1 ATAGTTAAAAAACCCATCTAGCTGTACGAACTTATGCGCTTAAGATCTAGACATCTTATATAATC 350 21723928 0.965202527 11 339 2368 0.962529274 1.710751835 0.049180328 0.191428571 0.337236534 350 9 7 411 2R:21723894-21723958 6 LBR FBtr0071713|FBtr0071711|FBtr0071712 21723656|21723656|21723656 21724055|21724055|21724055 CTTATG 6mer2-7 dme-miR-970-3p 2R + 21723900 21723958 3'utr LBR FlyBase G13862.1 AAAAAACCCATCTAGCTGTACGAACTTATGCGCTTAAGATCTAGACATCTTATATAATC 211 21723928 0.754587737 9 208 1342 0.986970684 2.180412633 0.03257329 0.336492891 0.543973941 211 3 1 303 2R:21723900-21723958 6 276 1759 FBgn0034657 642.43 28.1 42.96 0.429618791 9.822064057 6.424581006 -4 -4 -4 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 2R 21975811 21975816 + 2R_21975811_21975816_+ 0.885167618 0.683635735 0.784401676 0.142504573 CG9304 FBtr0071726|FBtr0345537 21975523|21975523 21976196|21976386 2R + 21975790 21975826 3'utr CG9304 FlyBase G18216.1 AAGTTAACATTTAACTGACTTTTGACTTGAGCTGAGT 6 21975811 0.762634674 3 6 54 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 2R:21975790-21975826 6 CG9304 FBtr0071726|FBtr0345537 21975523|21975523 21976196|21976386 TTGACT 6mer3-8 dme-miR-1012-3p 2R + 21975790 21975825 3'utr CG9304 FlyBase G13868.1 AAGTTAACATTTAACTGACTTTTGACTTGAGCTGAG 11 21975810 0.821556826 4 11 80 1 1.278753601 0.473684211 0.545454545 0.736842105 11 0 0 19 2R:21975790-21975825 6 8.5 1760 FBgn0034674 656.3166667 28.69666667 44.06 0.012951065 0.296201649 0.192918747 0 1 0.5 0.01 dme-miR-278-3p 6mer3-8 CCCACC 2R 21975839 21975844 + 2R_21975839_21975844_+ 1 1 1 0 CG9304 FBtr0071726|FBtr0345537 21975523|21975523 21976196|21976386 2R + 21975827 21975856 3'utr CG9304 FlyBase G18217.1 TTTTAAAATCGACCCACCATTATCTCGACA 5 21975846 0.946895696 3 3 14 1 0.698970004 0.4 0 0 5 0 0 5 2R:21975827-21975856 6 CG9304 FBtr0071726|FBtr0345537 21975523|21975523 21976196|21976386 CCCACC 6mer3-8 dme-miR-278-3p 2R + 21975832 21975871 3'utr CG9304 FlyBase G13869.1 AAATCGACCCACCATTATCTCGACACAAATTTATCTGAGT 6 21975846 0.951378963 4 6 27 1 1 0 0.333333333 0.6 6 0 0 10 2R:21975832-21975871 6 3.5 1761 FBgn0034674 656.3166667 28.69666667 44.06 0.005332792 0.121965385 0.079437131 -7 -7 -7 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2R 21975944 21975950 + 2R_21975944_21975950_+ 0.521223855 0.521223855 0.521223855 0 CG9304 FBtr0071726|FBtr0345537 21975523|21975523 21976196|21976386 2R + 21975913 21975982 3'utr CG9304 FlyBase G18218.1 AGCGAGTGCAAGAATGCACCAGAGATTGTTGTGTGATTTTATGTAATATGCTTGAATTTATAATTAGTTT 51 21975942 0.991628349 10 50 544 0.983870968 1.785329835 0.064516129 0.196078431 0.338709677 51 1 0 61 2R:21975913-21975982 7 CG9304 FBtr0071726|FBtr0345537 21975523|21975523 21976196|21976386 TGTGATT 7mer-m1 dme-miR-308-3p 2R + 21975911 21975964 3'utr CG9304 FlyBase G13870.1 AGAGCGAGTGCAAGAATGCACCAGAGATTGTTGTGTGATTTTATGTAATATGCT 32 21975942 0.991411445 8 31 336 0.979166667 1.672097858 0.125 0.40625 0.604166667 32 1 0 47 2R:21975911-21975964 7 40 1762 FBgn0034674 656.3166667 28.69666667 44.06 0.06094619 1.393890115 0.907852928 2 2 2 0.01 dme-miR-965-3p 7mer-m8 TACGCTT 2R 21976016 21976022 + 2R_21976016_21976022_+ 0.620204855 0.620204855 0.620204855 0 CG9304 FBtr0071726|FBtr0345537 21975523|21975523 21976196|21976386 2R + 21976003 21976035 3'utr CG9304 FlyBase G18219.1 CGATTCGATACAATACGCTTCAGCATCATCATT 51 21976016 0.873361361 3 50 258 0.984375 1.799340549 0.03125 0.235294118 0.390625 51 1 0 63 2R:21976003-21976035 7 CG9304 FBtr0071726|FBtr0345537 21975523|21975523 21976196|21976386 TACGCTT 7mer-m8 dme-miR-965-3p 2R + 21976003 21976050 3'utr CG9304 FlyBase G13871.1 CGATTCGATACAATACGCTTCAGCATCATCATTTCGTTGCGGTAGTTT 43 21976016 0.956900754 5 43 206 1 1.812913357 0.076923077 0.325581395 0.553846154 43 0 0 65 2R:21976003-21976050 7 46 1763 FBgn0034674 656.3166667 28.69666667 44.06 0.070088118 1.602973632 1.044030867 0 0 0 0.01 dme-miR-184-5p 8mer-A1 TGATAAGA 2R 22069514 22069521 + 2R_22069514_22069521_+ 0.601039903 0.493669137 0.54735452 0.075922621 Snp FBtr0339101|FBtr0339102|FBtr0339100|FBtr0339099 22069312|22069312|22069312|22069312 22069757|22069757|22069757|22069757 2R + 22069469 22069573 3'utr Snp FlyBase G18225.1 TTTTTTTTTTTTTGCCCTGATTTTATATTTTATTGTAACGGCAATTGATAAGACTTGAACAATTCGAAGCATCGCAGCGATCATACATACAAATAAATTTATAAA 66 22069516 0.965860183 7 64 352 0.950617284 1.886490725 0.12345679 0.181818182 0.333333333 66 4 0 77 2R:22069469-22069573 8 Snp FBtr0339100|FBtr0339099|FBtr0339101|FBtr0339102 22069312|22069312|22069312|22069312 22069757|22069757|22069757|22069757 TGATAAGA 8mer-A1 dme-miR-184-5p 2R + 22069500 22069538 3'utr Snp FlyBase G13876.1 ATTGTAACGGCAATTGATAAGACTTGAACAATTCGAAGC 26 22069516 0.692366864 6 20 124 0.825 1.51851394 0.1 0.461538462 0.65 26 7 0 33 2R:22069500-22069538 8 38 1764 FBgn0265192 273.9833333 20.67666667 31.70333333 0.138694568 1.837820409 1.198612133 -2 -2 -2 0.01 dme-miR-8-3p 7mer-A1 AGTATTA 2R 22077766 22077772 + 2R_22077766_22077772_+ 0.823349562 0.823349562 0.823349562 0 GlcT-1 FBtr0071755 22077671 22079381 2R + 22077680 22077961 3'utr GlcT-1 FlyBase G18240.1 TAGTTAAGTTTGTTATTTTGTACTTGTGAGCAAACGAACTCAGCGGACTGCAAGCGACTGGCGGGCGGCGTCTAGCGTCTGGTAGTAGTATTATTAGCTGAACCTTAGTCACTACGTAAGTCTAGACTTAAAGCTGTAAAAAGGCGAATGCGGAGCGGCATCCACGCACTCCTCCTGGACGTGAAGCGCGGCAGGCGGACCTAGATTAGTTTAGAAGACACTGTTTAGACGACGAGCGTATCGCTGCGATCGCTCGCCAGAGATTTAGATGTAGGCGTTCGA 158 22077776 0.999910226 36 151 1006 0.948979592 1.491361694 0.295918367 0.189873418 0.346938776 158 5 5 186 2R:22077680-22077961 7 GlcT-1 FBtr0071755 22077671 22079381 AGTATTA 7mer-A1 dme-miR-8-3p 2R + 22077613 22077877 stop_codon GlcT-1 FlyBase G13885.1 GGAACAACGGGGGACACGCTGATCTGCACGGGCGCCAAACAGCGACTGCTGGTGTCGTAGCACCTAATAGTTAAGTTTGTTATTTTGTACTTGTGAGCAAACGAACTCAGCGGACTGCAAGCGACTGGCGGGCGGCGTCTAGCGTCTGGTAGTAGTATTATTAGCTGAACCTTAGTCACTACGTAAGTCTAGACTTAAAGCTGTAAAAAGGCGAATGCGGAGCGGCATCCACGCACTCCTCCTGGACGTGAAGCGCGGCAGGCGG 87 22077776 0.970258852 29 81 467 0.928 1.763427994 0.36 0.298850575 0.512 87 8 1 116 2R:22077613-22077877 7 32.5 1765 FBgn0067102 306.5833333 10.92333333 16.72333333 0.106007067 2.97528227 1.943392466 -10 -10 -10 0.01 dme-miR-304-5p 6mer2-7 GAGATT 2R 22077939 22077944 + 2R_22077939_22077944_+ 1 1 1 0 GlcT-1 FBtr0071755 22077671 22079381 2R + 22077680 22077961 3'utr GlcT-1 FlyBase G18240.1 TAGTTAAGTTTGTTATTTTGTACTTGTGAGCAAACGAACTCAGCGGACTGCAAGCGACTGGCGGGCGGCGTCTAGCGTCTGGTAGTAGTATTATTAGCTGAACCTTAGTCACTACGTAAGTCTAGACTTAAAGCTGTAAAAAGGCGAATGCGGAGCGGCATCCACGCACTCCTCCTGGACGTGAAGCGCGGCAGGCGGACCTAGATTAGTTTAGAAGACACTGTTTAGACGACGAGCGTATCGCTGCGATCGCTCGCCAGAGATTTAGATGTAGGCGTTCGA 158 22077944 0.999910226 36 151 1006 0.948979592 1.491361694 0.295918367 0.189873418 0.346938776 158 5 5 186 2R:22077680-22077961 6 GlcT-1 FBtr0071755 22077671 22079381 GAGATT 6mer2-7 dme-miR-304-5p 2R + 22077891 22077960 3'utr GlcT-1 FlyBase G13886.1 TAGAAGACACTGTTTAGACGACGAGCGTATCGCTGCGATCGCTCGCCAGAGATTTAGATGTAGGCGTTCG 16 22077944 0.712944728 6 16 86 1 1.301029996 0.4 0.25 0.4 16 0 0 20 2R:22077891-22077960 6 16.5 1766 FBgn0067102 306.5833333 10.92333333 16.72333333 0.053818973 1.510527922 0.986645406 -5 -5 -5 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 2R 22078192 22078197 + 2R_22078192_22078197_+ 0.820820865 0.995111436 0.907966151 0.123241994 GlcT-1 FBtr0071755|FBtr0071755 22077671|22077671 22079381|22079381 2R + 22078050 22078218 3'utr GlcT-1 FlyBase G18241.1 TAGCCAGCCTGTACAGAGACGTAAGCCCTAGTTAGCATTATGATTGCGATAGTTAGTTCTCCCCGCTTCTGTTGTTGCTTTATTGAGTTGTAATTATTTATTTTGGCCAAGCACACTAGGTATACTGTTATCGCTAAGCCTATACTTATGATTATTTTTAGTTAAGTTG 51 22078192 0.990870265 24 51 534 1 1.785329835 0.06557377 0.196078431 0.327868852 51 0 0 61 2R:22078050-22078218 6 GlcT-1 FBtr0071755|FBtr0071755 22077671|22077671 22079381|22079381 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 2R + 22078156 22078230 3'utr GlcT-1 FlyBase G13889.1 CCAAGCACACTAGGTATACTGTTATCGCTAAGCCTATACTTATGATTATTTTTAGTTAAGTTGTTTGTGTTGTTT 10 22078177 0.988178915 8 10 104 1 1.113943352 0.076923077 0.2 0.384615385 10 0 0 13 2R:22078156-22078230 6 6.5 1767 FBgn0067102 306.5833333 10.92333333 16.72333333 0.021201413 0.595056454 0.388678493 0 15 7.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2R 22085376 22085382 + 2R_22085376_22085382_+ 0.823349562 0.823349562 0.823349562 0 Synj FBtr0071757|FBtr0308239|FBtr0071756 22084902|22084902|22084902 22085767|22085767|22085421 2R + 22085362 22085397 3'utr Synj FlyBase G18263.1 AAATTATAGCCGTACTAGTCAAATTATGAAGTAAAG 10 22085373 0.757413683 4 10 64 1 1.146128036 0.071428571 0.3 0.5 10 0 0 14 2R:22085362-22085397 7 Synj FBtr0071757|FBtr0308239|FBtr0071756 22084902|22084902|22084902 22085767|22085767|22085421 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R + 22085306 22085386 3'utr Synj FlyBase G13903.1 TGAAGTATATGGGCGACAAAGTATTACACTAATCTGCATAAATGTAATGTTTAAATAAATTATAGCCGTACTAGTCAAATT 9 22085367 0.976053773 7 8 51 0.8 1.079181246 0 0.444444444 0.666666667 9 3 0 12 2R:22085306-22085386 7 7.5 1768 FBgn0034691 628.3666667 16.23 24.76333333 0.011935706 0.462107209 0.302867142 3 9 6 0.01 dme-miR-282-5p 7mer-A1 GAGGCTA 2R 22085548 22085554 + 2R_22085548_22085554_+ 0.823349562 0.82308779 0.823218676 0.000185121 Synj FBtr0071757|FBtr0308239 22084902|22084902 22085767|22085767 2R + 22085535 22085567 3'utr Synj FlyBase G18265.1 ATTCCGTCAATTTGAGGCTACATCCGGATTTCT 8 22085546 0.734100956 3 8 51 1 1 0 0.125 0.3 8 0 0 10 2R:22085535-22085567 7 Synj FBtr0071757|FBtr0308239 22084902|22084902 22085767|22085767 GAGGCTA 7mer-A1 dme-miR-282-5p 2R + 22085519 22085563 3'utr Synj FlyBase G13904.1 GTTAAACTATCGTTGTATTCCGTCAATTTGAGGCTACATCCGGAT 13 22085546 0.96545828 4 12 85 1 1.255272505 0.111111111 0.307692308 0.5 13 0 0 18 2R:22085519-22085563 7 9.5 1769 FBgn0034691 628.3666667 16.23 24.76333333 0.015118561 0.585335798 0.383631714 2 2 2 0.01 dme-miR-283-5p 7mer-A1 GATATTA 2R 22107934 22107940 - 2R_22107934_22107940_- 0.782911824 0.782911824 0.782911824 0 Vrp1 FBtr0302295|FBtr0071792|FBtr0071796|FBtr0071791|FBtr0071795|FBtr0071793|FBtr0302298|FBtr0071794|FBtr0342980 22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579 22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477 2R - 22107910 22107970 3'utr Vrp1 FlyBase G25635.1 AAGGGAAGGACTATGGAAGCTTCCCCTCGCGATATTACCACTAAGCACACACAATATTATT 36 22107936 0.972761253 7 31 175 0.895833333 0.934498451 0.229166667 0.305555556 0.479166667 36 1 4 43 2R:22107910-22107970 7 Vrp1 FBtr0071793|FBtr0302298|FBtr0071794|FBtr0342980|FBtr0302295|FBtr0071796|FBtr0071792|FBtr0071791|FBtr0071795 22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579 22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477 GATATTA 7mer-A1 dme-miR-283-5p 2R - 22107924 22107987 3'utr Vrp1 FlyBase G19387.1 ATTTTGTTACATTTCAAAAGGGAAGGACTATGGAAGCTTCCCCTCGCGATATTACCACTAAGCA 31 22107936 0.842584372 5 23 172 0.790697674 0.753327667 0.465116279 0.290322581 0.488372093 31 4 5 34 2R:22107924-22107987 7 29 1770 FBgn0243516 610.6533333 20.62333333 31.73 0.04749012 1.406174236 0.913961551 -4 -4 -4 0.01 dme-miR-999-3p 7mer-A1 GTTAACA 2R 22108107 22108113 - 2R_22108107_22108113_- 0.823349562 0.823349562 0.823349562 0 Vrp1 FBtr0302295|FBtr0071792|FBtr0071796|FBtr0071791|FBtr0071795|FBtr0071793|FBtr0302298|FBtr0071794|FBtr0342980 22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579 22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477 2R - 22108057 22108119 3'utr Vrp1 FlyBase G25636.1 TTTACTGTTAACAAGCAATGAAATGATTGCGTAAAGCGCAGCGGAGGAATGTTATTTTGTATA 16 22108092 0.958229834 3 16 82 1 1.255272505 0.111111111 0.125 0.222222222 16 0 0 18 2R:22108057-22108119 7 Vrp1 FBtr0071793|FBtr0302298|FBtr0071794|FBtr0342980|FBtr0302295|FBtr0071796|FBtr0071792|FBtr0071791|FBtr0071795 22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579 22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477 GTTAACA 7mer-A1 dme-miR-999-3p 2R - 22108028 22108116 3'utr Vrp1 FlyBase G19388.1 ACTGTTAACAAGCAATGAAATGATTGCGTAAAGCGCAGCGGAGGAATGTTATTTTGTATATTGATTGCATAACACTAAAGTTGAATAGC 12 22108093 0.955511798 7 12 60 1 1.230448921 0 0.333333333 0.529411765 12 0 0 17 2R:22108028-22108116 7 8 1771 FBgn0243516 610.6533333 20.62333333 31.73 0.013100723 0.387910134 0.252127324 -21 -20 -20.5 0.01 dme-miR-8-3p 6mer3-8 CAGTAT 2R 22108229 22108234 - 2R_22108229_22108234_- 1 1 1 0 Vrp1 FBtr0302295|FBtr0071792|FBtr0071796|FBtr0071791|FBtr0071795|FBtr0071793|FBtr0302298|FBtr0071794|FBtr0342980 22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579 22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477 2R - 22108163 22108262 3'utr Vrp1 FlyBase G25637.1 AATTTTAATTTTAAAAGTGTATTACTACCAGTATAGATTATTATTGTATAGGAAGGGAAAGCCCAGGCTTACAATCCACAGCACACACATATATATGTTA 13 22108231 0.971263209 10 13 79 1 1.146128036 0.071428571 0.076923077 0.142857143 13 0 0 14 2R:22108163-22108262 6 Vrp1 FBtr0071793|FBtr0302298|FBtr0071794|FBtr0342980|FBtr0302295|FBtr0071796|FBtr0071792|FBtr0071791|FBtr0071795 22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579 22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477 CAGTAT 6mer3-8 dme-miR-8-3p 2R - 22108191 22108254 3'utr Vrp1 FlyBase G19389.1 TTTTAAAAGTGTATTACTACCAGTATAGATTATTATTGTATAGGAAGGGAAAGCCCAGGCTTAC 8 22108223 0.993185206 5 6 72 0.846153846 1.041392685 0.076923077 0.375 0.615384615 8 2 0 11 2R:22108191-22108254 6 6 1772 FBgn0243516 610.6533333 20.62333333 31.73 0.009825542 0.290932601 0.189095493 -3 -11 -7 0.01 dme-miR-184-5p 7mer-m8 TGATAAG 2R 22124374 22124380 + 2R_22124374_22124380_+ 0.658999343 0.657532008 0.658265676 0.001037538 mei-S332 FBtr0342979 22124263 22124566 2R + 22124360 22124410 3'utr mei-S332 FlyBase G18282.1 AAATCGTCAGGCCCTGATAAGTTTAATTTATAGACTAAAAGCTGACATCGG 7 22124390 0.98655707 4 7 54 1 0.954242509 0.444444444 0.285714286 0.444444444 7 0 0 9 2R:22124360-22124410 7 mei-S332 FBtr0342979 22124263 22124566 TGATAAG 7mer-m8 dme-miR-184-5p 2R + 22124378 22124430 3'utr mei-S332 FlyBase G13917.1 AAGTTTAATTTATAGACTAAAAGCTGACATCGGATTACTTTTTGCCTGCAATA 5 22124390 0.981859914 3 5 43 1 0.84509804 0.428571429 0.4 0.571428571 5 0 0 7 2R:22124378-22124430 2 3.5 1773 FBgn0002715 104.3466667 8.076666667 12.3 0.033542039 0.43334709 0.284552846 -16 -16 -16 0.01 dme-miR-965-3p 7mer-A1 ACGCTTA 2R 22216499 22216505 + 2R_22216499_22216505_+ 0.823349562 0.823349562 0.823349562 0 ari-2 FBtr0071774 22216391 22217264 2R + 22216422 22216518 3'utr ari-2 FlyBase G18323.1 ACGGACAGCCTGTCTTGTTTAGCACAAACACTCTTTGATTGACTGCTGACAGGTCGACGTGACGCGACAGTATAGAGACGCTTATTTAAATTAAATT 62 22216506 0.886261505 10 57 413 0.9375 1.875061263 0.0375 0.258064516 0.425 62 5 0 75 2R:22216422-22216518 7 ari-2 FBtr0071774 22216391 22217264 ACGCTTA 7mer-A1 dme-miR-965-3p 2R + 22216452 22216520 3'utr ari-2 FlyBase G13947.2 CTCTTTGATTGACTGCTGACAGGTCGACGTGACGCGACAGTATAGAGACGCTTATTTAAATTAAATTAT 31 22216506 0.821617939 7 27 207 0.886363636 1.591064607 0.045454545 0.35483871 0.545454545 31 5 0 39 2R:22216452-22216520 7 34 1774 FBgn0025186 276.3333333 11.22 17.22333333 0.123039807 3.03030303 1.974066189 -7 -7 -7 0.01 dme-miR-8-3p 6mer2-7 AGTATT 2R 22217036 22217041 + 2R_22217036_22217041_+ 1 1 1 0 ari-2 FBtr0071774 22216391 22217264 2R + 22217013 22217075 3'utr ari-2 FlyBase G18326.1 TTAGCCCCGCGTGAACAGCATCAAGTATTCGCAATCTGTATCTCGTAACTAATCGCAGCACAT 21 22217049 0.981506427 5 20 140 0.956521739 1.342422681 0.130434783 0.047619048 0.130434783 21 1 0 22 2R:22217013-22217075 6 ari-2 FBtr0071774 22216391 22217264 AGTATT 6mer2-7 dme-miR-8-3p 2R + 22217039 22217070 3'utr ari-2 FlyBase G13950.2 ATTCGCAATCTGTATCTCGTAACTAATCGCAG 16 22217049 0.739261123 3 15 100 1 1.447158031 0.035714286 0.5625 0.75 16 0 0 28 2R:22217039-22217070 2 13.5 1775 FBgn0025186 276.3333333 11.22 17.22333333 0.048854041 1.203208556 0.783820399 -13 -13 -13 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT 2R 22217135 22217140 + 2R_22217135_22217140_+ 0.92810338 1 0.96405169 0.050838573 ari-2 FBtr0071774 22216391 22217264 2R + 22217100 22217248 3'utr ari-2 FlyBase G18327.1 AAGAACGAAGATAGATACTCCCCGTCCCCGATCCCGTTCCTTTTGATTCTCACTCGATTCTCGATTAACTTTGTAAGCTGAATCATAAATTATATTCTAGGATTACGCTATGTATGTATGCTTATGCGACTGAATTTGAATTAAATTTA 101 22217143 0.900660744 28 97 888 0.941176471 1.748188027 0.201680672 0.148514851 0.277310924 101 6 1 112 2R:22217100-22217248 6 ari-2 FBtr0071774 22216391 22217264 GTTCCT 6mer2-7 dme-miR-276a-3p 2R + 22217099 22217155 3'utr ari-2 FlyBase G13951.1 TAAGAACGAAGATAGATACTCCCCGTCCCCGATCCCGTTCCTTTTGATTCTCACTCG 31 22217142 0.934373258 8 28 232 0.87755102 1.633468456 0.040816327 0.35483871 0.591836735 31 6 0 43 2R:22217099-22217155 6 26 1776 FBgn0025186 276.3333333 11.22 17.22333333 0.094089264 2.317290553 1.509580027 -8 -7 -7.5 0.01 dme-miR-1006-3p 6mer2-7 GAATTT 2R 22217231 22217236 + 2R_22217231_22217236_+ 0.999998351 0.989327065 0.994662708 0.007545749 ari-2 FBtr0071774 22216391 22217264 2R + 22217100 22217248 3'utr ari-2 FlyBase G18327.1 AAGAACGAAGATAGATACTCCCCGTCCCCGATCCCGTTCCTTTTGATTCTCACTCGATTCTCGATTAACTTTGTAAGCTGAATCATAAATTATATTCTAGGATTACGCTATGTATGTATGCTTATGCGACTGAATTTGAATTAAATTTA 101 22217223 0.900660744 28 97 888 0.941176471 1.748188027 0.201680672 0.148514851 0.277310924 101 6 1 112 2R:22217100-22217248 6 ari-2 FBtr0071774 22216391 22217264 GAATTT 6mer2-7 dme-miR-1006-3p 2R + 22217167 22217248 3'utr ari-2 FlyBase G13951.2 ACTTTGTAAGCTGAATCATAAATTATATTCTAGGATTACGCTATGTATGTATGCTTATGCGACTGAATTTGAATTAAATTTA 39 22217222 0.987367256 13 36 328 0.9375 1.77815125 0.28125 0.461538462 0.671875 39 4 0 60 2R:22217167-22217248 6 46 1777 FBgn0025186 276.3333333 11.22 17.22333333 0.166465621 4.099821747 2.670795433 8 9 8.5 0.01 dme-miR-11-3p 7mer-m1 TGTGATG 2R 22298338 22298344 - 2R_22298338_22298344_- 0.535593563 0.535593563 0.535593563 0 wdp FBtr0071851|FBtr0071852|FBtr0071849|FBtr0071850|FBtr0342984 22298212|22298212|22298212|22298212|22298212 22298905|22298905|22298905|22298905|22298905 2R - 22298329 22298440 3'utr wdp FlyBase G25682.1 TGAATTCAGTCGTCGAGTGCAAAATATCAATGAGCCGGGGAAAGCGGAAAGGAGTTAACTCTTTTGCATGATAAATGCTATCAATCTGCATCTGCATGTGATGTTCACACCA 19 22298353 0.995783327 9 19 133 1 1.342422681 0.090909091 0.157894737 0.272727273 19 0 0 22 2R:22298329-22298440 7 wdp FBtr0071850|FBtr0342984|FBtr0071852|FBtr0071849|FBtr0071851 22298212|22298212|22298212|22298212|22298212 22298905|22298905|22298905|22298905|22298905 TGTGATG 7mer-m1 dme-miR-11-3p 2R - 22298329 22298410 3'utr wdp FlyBase G19428.1 TGAGCCGGGGAAAGCGGAAAGGAGTTAACTCTTTTGCATGATAAATGCTATCAATCTGCATCTGCATGTGATGTTCACACCA 12 22298351 0.980695754 7 11 72 0.916666667 1.342422681 0.166666667 0.75 0.875 12 2 0 22 2R:22298329-22298410 7 8 1778 FBgn0034718 26.33333333 1.036666667 1.556666667 0.303797468 7.717041801 5.139186296 9 7 8 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2R 22298467 22298473 - 2R_22298467_22298473_- 0.671796081 0.555803406 0.613799743 0.082019225 wdp FBtr0071851|FBtr0071852|FBtr0071849|FBtr0071850|FBtr0342984 22298212|22298212|22298212|22298212|22298212 22298905|22298905|22298905|22298905|22298905 2R - 22298453 22298499 3'utr wdp FlyBase G25683.1 ACTCCTAAGCGTAAATCTAGTTTAATACCAAAGTTAAAAAAATATAT 77 22298474 0.784598154 4 74 530 0.943820225 1.447158031 0.123595506 0.142857143 0.258426966 77 3 2 84 2R:22298453-22298499 7 wdp FBtr0071850|FBtr0342984|FBtr0071852|FBtr0071849|FBtr0071851 22298212|22298212|22298212|22298212|22298212 22298905|22298905|22298905|22298905|22298905 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 22298443 22298493 3'utr wdp FlyBase G19429.1 AAGCGTAAATCTAGTTTAATACCAAAGTTAAAAAAATATATGCGTTTAAAC 31 22298466 0.952245437 4 30 190 0.977272727 1.633468456 0.068181818 0.290322581 0.5 31 1 0 43 2R:22298443-22298493 7 54 1779 FBgn0034718 26.33333333 1.036666667 1.556666667 2.050632911 52.09003215 34.68950749 1 -7 -3 0.01 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2R 22328788 22328793 + 2R_22328788_22328793_+ 1 1 1 0 Gp150 FBtr0071815|FBtr0071813|FBtr0342986|FBtr0342985|FBtr0071816|FBtr0071814 22328523|22328523|22328523|22328523|22328523|22328523 22329416|22329416|22329416|22329416|22329416|22329416 2R + 22328617 22328848 3'utr Gp150 FlyBase G18349.2 AAAGTGGAAAATCACATCAGACAATTGACTAAACACAAGCACAAGAATGTAAGAAACAGGAGGAGGAGCAGTAGGTGGCAGTTAAAAGTATTAGCGAAAGTGCGAGGAAACAAAGCAACAACTAAAAAATACTTGAATCCAAATAAGAGATTGAAAGAGAGAGAATAAATCTTTGACAAAATCCTTTATCCTTGAAATATCCTGTACCATCAAATACTGTTAAGACCAGTCA 339 22328789 0.975198585 24 318 1705 0.945595855 1.717194824 0.098445596 0.109144543 0.21761658 339 15 6 365 2R:22328617-22328848 6 Gp150 FBtr0071814|FBtr0071816|FBtr0342985|FBtr0342986|FBtr0071813|FBtr0071815 22328523|22328523|22328523|22328523|22328523|22328523 22329416|22329416|22329416|22329416|22329416|22329416 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2R + 22328615 22328813 3'utr Gp150 FlyBase G13968.2 AAAAAGTGGAAAATCACATCAGACAATTGACTAAACACAAGCACAAGAATGTAAGAAACAGGAGGAGGAGCAGTAGGTGGCAGTTAAAAGTATTAGCGAAAGTGCGAGGAAACAAAGCAACAACTAAAAAATACTTGAATCCAAATAAGAGATTGAAAGAGAGAGAATAAATCTTTGACAAAATCCTTTATCCTTGAAA 184 22328788 0.973954171 24 168 822 0.928057554 1.566521666 0.133093525 0.375 0.586330935 184 14 6 258 2R:22328615-22328813 6 147 1780 FBgn0013272 4600.843333 132.9433333 202.8033333 0.031950664 1.105734273 0.724840157 -1 0 -0.5 0.01 dme-miR-190-5p 6mer2-7 CATATC 2R 22328968 22328973 + 2R_22328968_22328973_+ 1 1 1 0 Gp150 FBtr0071815|FBtr0071813|FBtr0342986|FBtr0342985|FBtr0071816|FBtr0071814 22328523|22328523|22328523|22328523|22328523|22328523 22329416|22329416|22329416|22329416|22329416|22329416 2R + 22328894 22329041 3'utr Gp150 FlyBase G18350.1 GATGAGCAACCGTTTCGAAAGCAACGGATTTGCAATTTATCAAACCTCTGCCCACAATCCGTATCCAATTAGTCCATATCCGGGAACAACTTGAAGATTTAGTGCCATTTTGCCAAAATTCAAACCGAGCGAAAATTACTTAAACACA 49 22328971 0.972487237 17 42 252 0.86440678 1.230448921 0.033898305 0.163265306 0.305084746 49 6 2 51 2R:22328894-22329041 6 Gp150 FBtr0071814|FBtr0071816|FBtr0342985|FBtr0342986|FBtr0071813|FBtr0071815 22328523|22328523|22328523|22328523|22328523|22328523 22329416|22329416|22329416|22329416|22329416|22329416 CATATC 6mer2-7 dme-miR-190-5p 2R + 22328936 22328999 3'utr Gp150 FlyBase G13969.1 AACCTCTGCCCACAATCCGTATCCAATTAGTCCATATCCGGGAACAACTTGAAGATTTAGTGCC 25 22328971 0.935253529 4 24 96 1 1.602059991 0.025 0.32 0.575 25 0 0 40 2R:22328936-22328999 6 24.5 1781 FBgn0013272 4600.843333 132.9433333 202.8033333 0.005325111 0.184289045 0.120806693 -3 -3 -3 0.01 dme-miR-2a-2-5p 7mer-A1 GATGAGA 2R 22329187 22329193 + 2R_22329187_22329193_+ 0.782911824 0.782911824 0.782911824 0 Gp150 FBtr0071815|FBtr0071813|FBtr0342986|FBtr0342985|FBtr0071816|FBtr0071814 22328523|22328523|22328523|22328523|22328523|22328523 22329416|22329416|22329416|22329416|22329416|22329416 2R + 22329078 22329240 3'utr Gp150 FlyBase G18351.1 GAAACGAGGAGCGAGGAACAGAAAGTAGTAAGAGTTTTAGATGCGGGTCTGTGTAGCAAACGGTTAGGAGACTCCCTAGAATGACGTCTGATTTTTAATATGATCAAGAGATGAGAGAAATAATTAATGCATAAACTATGTTAAGACTTTTTTATTATCTTTT 124 22329159 0.983790929 28 118 918 0.957446809 1.829303773 0.134751773 0.120967742 0.226950355 124 5 1 135 2R:22329078-22329240 7 Gp150 FBtr0071814|FBtr0071816|FBtr0342985|FBtr0342986|FBtr0071813|FBtr0071815 22328523|22328523|22328523|22328523|22328523|22328523 22329416|22329416|22329416|22329416|22329416|22329416 GATGAGA 7mer-A1 dme-miR-2a-2-5p 2R + 22329078 22329232 3'utr Gp150 FlyBase G13970.2 GAAACGAGGAGCGAGGAACAGAAAGTAGTAAGAGTTTTAGATGCGGGTCTGTGTAGCAAACGGTTAGGAGACTCCCTAGAATGACGTCTGATTTTTAATATGATCAAGAGATGAGAGAAATAATTAATGCATAAACTATGTTAAGACTTTTTTAT 48 22329159 0.980972361 17 46 332 0.959459459 1.851258349 0.162162162 0.416666667 0.621621622 48 3 0 71 2R:22329078-22329232 7 21 1782 FBgn0013272 4600.843333 132.9433333 202.8033333 0.004564381 0.157962039 0.103548594 28 28 28 0.01 dme-miR-986-5p 6mer3-8 ATTCGA 2R 22329272 22329277 + 2R_22329272_22329277_+ 1 1 1 0 Gp150 FBtr0071815|FBtr0071813|FBtr0342986|FBtr0342985|FBtr0071816|FBtr0071814 22328523|22328523|22328523|22328523|22328523|22328523 22329416|22329416|22329416|22329416|22329416|22329416 2R + 22329248 22329406 3'utr Gp150 FlyBase G18352.1 CGAAGGCAAGTAACAGCTTGACCTATTCGACATTGAAACCGATTCCGAAAACAATAAATTATTTTAACCAAACCGATCGTAATCTTTACAATGCATACTTAATAGACATACACACTTGCATACGTACTTTAAACAATAACATGCCTTTCAATAAAATTG 29 22329290 0.955875425 11 29 146 1 1.579783597 0.078947368 0.206896552 0.394736842 29 0 0 38 2R:22329248-22329406 6 Gp150 FBtr0071814|FBtr0071816|FBtr0342985|FBtr0342986|FBtr0071813|FBtr0071815 22328523|22328523|22328523|22328523|22328523|22328523 22329416|22329416|22329416|22329416|22329416|22329416 ATTCGA 6mer3-8 dme-miR-986-5p 2R + 22329272 22329303 3'utr Gp150 FlyBase G13971.1 ATTCGACATTGAAACCGATTCCGAAAACAATA 18 22329290 0.76458258 3 16 56 1 1.322219295 0.047619048 0.166666667 0.285714286 18 0 0 21 2R:22329272-22329303 5 6 1783 FBgn0013272 4600.843333 132.9433333 202.8033333 0.001304109 0.045132011 0.029585313 -18 -18 -18 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 2R 22425793 22425799 - 2R_22425793_22425799_- 0.782911824 0.782911824 0.782911824 0 CG10344 FBtr0071840|FBtr0071841 22425731|22425731 22426203|22426021 2R - 22425768 22425819 3'utr CG10344 FlyBase G25719.1 ATGAAAGCACATGCTACCCTGTACAAAAATACCTAAGAGATCTTCCACTTTA 11 22425808 0.954752003 3 11 53 1 1.041392685 0.090909091 0 0 11 0 0 11 2R:22425768-22425819 7 CG10344 FBtr0071841|FBtr0071840 22425731|22425731 22426021|22426203 GTACAAA 7mer-A1 dme-miR-305-5p 2R - 22425791 22425827 3'utr CG10344 FlyBase G19455.1 ATGTTTATATGAAAGCACATGCTACCCTGTACAAAAA 8 22425808 0.93932337 2 8 31 1 1.176091259 0.533333333 0.625 0.8 8 0 0 15 2R:22425791-22425827 7 9 1784 FBgn0034729 69.31 7.356666667 11.47666667 0.129851392 1.223380154 0.784199826 9 9 9 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 22425950 22425955 - 2R_22425950_22425955_- 1 1 1 0 CG10344 FBtr0071840|FBtr0071840|FBtr0071840|FBtr0071841|FBtr0071841|FBtr0071841 22425731|22425731|22425731|22425731|22425731|22425731 22426203|22426203|22426203|22426021|22426021|22426021 2R - 22425905 22426006 3'utr CG10344 FlyBase G25720.1 AGGATAAATATCTGCTGTGCAGTTCCTACCTGGGGATCCCGTAAATGACTACTGTGACTTTGGCAACCTCTGGCTGGTTAAATGTTAGTCTTAAGATAGTGA 43 22425947 0.979602929 14 41 285 0.961538462 1.397940009 0.096153846 0.139534884 0.288461538 43 1 1 50 2R:22425905-22426006 6 CG10344 FBtr0071841|FBtr0071841|FBtr0071841|FBtr0071840|FBtr0071840|FBtr0071840 22425731|22425731|22425731|22425731|22425731|22425731 22426021|22426021|22426021|22426203|22426203|22426203 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 22425905 22425998 3'utr CG10344 FlyBase G19456.1 TATCTGCTGTGCAGTTCCTACCTGGGGATCCCGTAAATGACTACTGTGACTTTGGCAACCTCTGGCTGGTTAAATGTTAGTCTTAAGATAGTGA 29 22425948 0.983546925 9 27 212 0.930232558 1.602059991 0.046511628 0.379310345 0.581395349 29 3 0 40 2R:22425905-22425998 6 23.5 1785 FBgn0034729 69.31 7.356666667 11.47666667 0.339056413 3.194381513 2.047632878 -8 -7 -7.5 0.01 dme-miR-999-3p 8mer-A1 AGTTAACA 2R 22496708 22496715 - 2R_22496708_22496715_- 0.643926235 0.643926235 0.643926235 0 px FBtr0331941|FBtr0112820|FBtr0071838 22496502|22496502|22496502 22496802|22496802|22496802 2R - 22496680 22496739 3'utr px FlyBase G25726.1 TGAAAGTCGCATCGGATCGGAACTAGTTAACATCTACCTTCAGTAACATTATACTAAGCG 18 22496715 0.692980713 8 16 126 0.9 0.954242509 0.1 0.111111111 0.2 18 1 1 18 2R:22496680-22496739 8 px FBtr0112820|FBtr0071838|FBtr0331941 22496502|22496502|22496502 22496802|22496802|22496802 AGTTAACA 8mer-A1 dme-miR-999-3p 2R - 22496687 22496739 3'utr px FlyBase G19460.1 TGAAAGTCGCATCGGATCGGAACTAGTTAACATCTACCTTCAGTAACATTATA 11 22496715 0.773194885 5 11 68 1 1.278753601 0.368421053 0.454545455 0.684210526 11 0 0 19 2R:22496687-22496739 8 13.5 1786 FBgn0003175 880.3466667 16.72333333 25.61666667 0.015334868 0.807255332 0.527000651 0 0 0 0.01 dme-miR-305-5p 6mer2-7 GTACAA 2R 22563548 22563553 - 2R_22563548_22563553_- 1 1 1 0 dnr1 FBtr0071837|FBtr0330229 22563509|22563150 22564119|22564059 2R - 22563535 22563576 3'utr dnr1 FlyBase G25744.1 CTTATACGATGTAGCCCTTGAATGTACAACATAGTTACTTAC 6 22563554 0.861688499 3 6 42 1 0.77815125 0.166666667 0 0 6 0 0 6 2R:22563535-22563576 6 dnr1 FBtr0071837|FBtr0330229 22563509|22563150 22564119|22564059 GTACAA 6mer2-7 dme-miR-305-5p 2R - 22563534 22563577 3'utr dnr1 FlyBase G19472.1 CCTTATACGATGTAGCCCTTGAATGTACAACATAGTTACTTACT 8 22563555 0.84610267 3 8 54 1 1 0.3 0.25 0.4 8 0 0 10 2R:22563534-22563577 6 6 1787 FBgn0260866 45.33333333 1.52 2.263333333 0.132352941 3.947368421 2.65095729 1 2 1.5 0.01 dme-miR-8-3p 6mer2-7 AGTATT 2R 22563863 22563868 - 2R_22563863_22563868_- 1 1 1 0 dnr1 FBtr0071837|FBtr0330229 22563509|22563150 22564119|22564059 2R - 22563826 22563915 3'utr dnr1 FlyBase G25745.1 AGCGGCGTAGTCAGTCTTTCAAACAATCTTAGCTCTATCTTTACTCAAGTATTCTAGCGACATAAGCAACTGAAACTTTAACTCTAACTC 46 22563861 0.988486033 7 40 406 0.884615385 1.662757832 0.115384615 0.108695652 0.211538462 46 6 0 46 2R:22563826-22563915 6 dnr1 FBtr0071837|FBtr0330229 22563509|22563150 22564119|22564059 AGTATT 6mer2-7 dme-miR-8-3p 2R - 22563832 22563903 3'utr dnr1 FlyBase G19474.1 AGTCTTTCAAACAATCTTAGCTCTATCTTTACTCAAGTATTCTAGCGACATAAGCAACTGAAACTTTAACTC 27 22563861 0.989427262 8 25 242 0.972972973 1.556302501 0.135135135 0.296296296 0.486486486 27 1 0 36 2R:22563832-22563903 6 30.5 1788 FBgn0260866 45.33333333 1.52 2.263333333 0.672794118 20.06578947 13.47569956 -7 -7 -7 0.01 dme-miR-1008-3p 7mer-A1 GCTGTGA 2R 22600273 22600279 + 2R_22600273_22600279_+ 0.82334956 0.823349561 0.82334956 0 CG4269 FBtr0343001|FBtr0071854|FBtr0343000 22600206|22600206|22600206 22600695|22600336|22600336 2R + 22600252 22600305 3'utr CG4269 FlyBase G18424.1 TTCGCGCTCCTGCATGGATTGGCTGTGATAAACCCACTGTATTTATTTAAATTA 252 22600271 0.767058443 10 232 1885 0.927007299 1.404833717 0.00729927 0.079365079 0.153284672 252 11 9 254 2R:22600252-22600305 7 CG4269 FBtr0071854|FBtr0343000|FBtr0343001 22600206|22600206|22600206 22600336|22600336|22600695 GCTGTGA 7mer-A1 dme-miR-1008-3p 2R + 22600252 22600306 3'utr CG4269 FlyBase G14017.1 TTCGCGCTCCTGCATGGATTGGCTGTGATAAACCCACTGTATTTATTTAAATTAT 137 22600271 0.984321713 8 121 972 0.868932039 1.298610522 0.038834951 0.350364964 0.567961165 137 19 8 179 2R:22600252-22600306 7 192.5 1789 FBgn0034741 15.34666667 2.056666667 3.076666667 12.54344049 93.59805511 62.56771398 2 2 2 0.01 dme-miR-8-3p 6mer3-8 CAGTAT 2R 22638940 22638945 - 2R_22638940_22638945_- 1 1 1 0 CG3732 FBtr0071936 22638805 22639037 2R - 22638901 22638965 3'utr CG3732 FlyBase G25769.1 TTGCCTTCTTATTTATTTGCCAGTATGCGCTCAGATGATCATGACATAGGGTACGATGTCCAGCC 36 22638930 0.971490308 8 36 217 1 1.633468456 0.302325581 0.166666667 0.302325581 36 0 0 43 2R:22638901-22638965 6 CG3732 FBtr0071936 22638805 22639037 CAGTAT 6mer3-8 dme-miR-8-3p 2R - 22638883 22638954 3'utr CG3732 FlyBase G19494.1 TTTATTTGCCAGTATGCGCTCAGATGATCATGACATAGGGTACGATGTCCAGCCTAACTCTTAAAGTATAAT 29 22638930 0.821157287 6 28 165 0.978723404 1.361727836 0.127659574 0.379310345 0.617021277 29 0 1 46 2R:22638883-22638954 6 17 1790 FBgn0034750 437.0033333 42.87333333 66.05 0.038901305 0.396516871 0.257380772 -15 -15 -15 0.01 dme-miR-263a-5p 7mer-m1 TGCCATT 2R 22641834 22641840 - 2R_22641834_22641840_- 0.765586663 0.765586663 0.765586663 0 Ugt58Fa FBtr0345505 22641784 22641949 2R - 22641824 22641872 3'utr Ugt58Fa FlyBase G25776.1 AAGAAAAGCTGAATCATCAGAAAGTTGGTTGCTGCCATTCAAGAAAGTC 18 22641847 0.769249744 5 17 120 1 1.301029996 0 0.111111111 0.2 18 0 0 20 2R:22641824-22641872 7 Ugt58Fa FBtr0345505 22641784 22641949 TGCCATT 7mer-m1 dme-miR-263a-5p 2R - 22641829 22641870 3'utr Ugt58Fa FlyBase G19502.1 GAAAAGCTGAATCATCAGAAAGTTGGTTGCTGCCATTCAAGA 9 22641847 0.708573702 4 8 57 1 1.113943352 0.153846154 0.444444444 0.615384615 9 0 0 13 2R:22641829-22641870 7 12.5 1791 FBgn0040091 525 36.25 55.4 0.023809524 0.344827586 0.225631769 7 7 7 0.01 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 22672188 22672195 + 2R_22672188_22672195_+ 0.625364269 0.625364269 0.625364269 0 RYBP FBtr0071868|FBtr0345500 22671942|22671942 22673212|22673212 2R + 22672116 22672213 3'utr RYBP FlyBase G18451.1 AAGCCCCCACTAGTTCATGACTTCCAGCCCAGGCCAAGATGGCAAAGCAAAGCGAAGCGACGGCGAGTCGATTGCATTTACACGACGCTCTCCAAATC 80 22672187 0.918998936 3 76 381 0.96039604 1.50965048 0.257425743 0.225 0.386138614 80 2 2 97 2R:22672116-22672213 8 RYBP FBtr0071868|FBtr0345500 22671942|22671942 22673212|22673212 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 22672165 22672215 3'utr RYBP FlyBase G14033.1 AAGCGAAGCGACGGCGAGTCGATTGCATTTACACGACGCTCTCCAAATCCC 24 22672187 0.97069128 2 23 133 0.95 1.579783597 0.225 0.458333333 0.675 24 2 0 38 2R:22672165-22672215 8 35 1792 FBgn0034763 242.2733333 14.13333333 21.79333333 0.144464929 2.476415094 1.605995717 1 1 1 0.01 dme-miR-276a-3p 6mer3-8 AGTTCC 2R 22672255 22672260 + 2R_22672255_22672260_+ 1 1 1 0 RYBP FBtr0071868|FBtr0345500 22671942|22671942 22673212|22673212 2R + 22672243 22672300 3'utr RYBP FlyBase G18452.1 TAGCGATGCATGAGTTCCCTGAATATCTCTGTCTCGTATCGTAATTTTAGTTGTAATT 7 22672272 0.986012599 4 7 66 1 0.903089987 0 0.142857143 0.25 7 0 0 8 2R:22672243-22672300 6 RYBP FBtr0071868|FBtr0345500 22671942|22671942 22673212|22673212 AGTTCC 6mer3-8 dme-miR-276a-3p 2R + 22672231 22672295 3'utr RYBP FlyBase G14034.1 AGACCCTGTAAATAGCGATGCATGAGTTCCCTGAATATCTCTGTCTCGTATCGTAATTTTAGTTG 7 22672272 0.988156647 4 7 67 1 1 0.3 0.285714286 0.5 7 0 0 10 2R:22672231-22672295 6 4.5 1793 FBgn0034763 242.2733333 14.13333333 21.79333333 0.018574062 0.318396226 0.206485164 -17 -17 -17 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 2R 22672429 22672434 + 2R_22672429_22672434_+ 1 1 1 0 RYBP FBtr0071868|FBtr0345500 22671942|22671942 22673212|22673212 2R + 22672422 22672464 3'utr RYBP FlyBase G18454.1 AAGTGCAAGTTAATCTCAATGTTCCACTAGCAGCGCCCATCCC 13 22672431 0.759341852 5 12 76 0.9375 1.176091259 0.0625 0.230769231 0.375 13 1 0 15 2R:22672422-22672464 6 RYBP FBtr0071868|FBtr0345500 22671942|22671942 22673212|22673212 AGTTAA 6mer3-8 dme-miR-999-3p 2R + 22672422 22672466 3'utr RYBP FlyBase G14036.1 AAGTGCAAGTTAATCTCAATGTTCCACTAGCAGCGCCCATCCCCC 8 22672441 0.971807227 3 8 48 1 0.954242509 0.222222222 0.125 0.222222222 8 0 0 9 2R:22672422-22672466 6 8.5 1794 FBgn0034763 242.2733333 14.13333333 21.79333333 0.03508434 0.601415094 0.390027531 -2 -12 -7 0.01 dme-miR-14-3p 8mer-A1 AAGACTGA 2R 22672600 22672607 + 2R_22672600_22672607_+ 0.643565469 0.643565469 0.643565469 0 RYBP FBtr0071868|FBtr0345500 22671942|22671942 22673212|22673212 2R + 22672578 22672695 3'utr RYBP FlyBase G18456.1 TAATTTTAATTTGTTTGTATACAAGACTGATTAAGCGTTACCAACCAGATATAGAGAGGTCCGCACACGCACCCAGCCCGAATCCGATTTTCCTTTTGGTTTACACCCGAGATAGCCT 32 22672609 0.984839309 11 32 254 1 1.556302501 0.222222222 0.125 0.222222222 32 0 0 36 2R:22672578-22672695 8 RYBP FBtr0071868|FBtr0345500 22671942|22671942 22673212|22673212 AAGACTGA 8mer-A1 dme-miR-14-3p 2R + 22672542 22672629 3'utr RYBP FlyBase G14037.1 GAAGAGAGCCACGTAGCTTGGTTGTAGACAATTTGCTAATTTTAATTTGTTTGTATACAAGACTGATTAAGCGTTACCAACCAGATAT 22 22672593 0.991646961 9 17 188 0.806451613 0.795880017 0.096774194 0.318181818 0.516129032 22 3 3 25 2R:22672542-22672629 8 24.5 1795 FBgn0034763 242.2733333 14.13333333 21.79333333 0.101125451 1.733490566 1.124197002 -9 7 -1 0.01 dme-miR-283-5p 8mer-m1 TGATATTT 2R 22685061 22685068 - 2R_22685061_22685068_- 0.555593841 0.555593841 0.555593841 0 Ppa FBtr0343014 22684953 22687104 2R - 22685006 22685070 3'utr Ppa FlyBase G25789.1 ATTGATATTTCTGTTTTAGGAGGCGCAACCCCCAAAAAATTTGAGCGATACGATGTGGAAGGAGG 12 22685061 0.940690088 5 11 88 0.916666667 1.041392685 0.083333333 0 0 12 1 0 11 2R:22685006-22685070 8 Ppa FBtr0343014 22684953 22687104 TGATATTT 8mer-m1 dme-miR-283-5p 2R - 22685036 22685074 3'utr Ppa FlyBase G19512.1 GACAATTGATATTTCTGTTTTAGGAGGCGCAACCCCCAA 6 22685061 0.994922889 2 4 41 0.777777778 0.84509804 0.666666667 0.333333333 0.555555556 6 2 0 7 2R:22685036-22685074 8 6 1796 FBgn0020257 1130.93 34.32 53.00666667 0.005305368 0.174825175 0.113193309 -7 -7 -7 0.01 dme-miR-92b-3p 7mer-A1 TGCAATA 2R 22685184 22685190 - 2R_22685184_22685190_- 0.782911824 0.782911824 0.782911824 0 Ppa FBtr0343014 22684953 22687104 2R - 22685145 22685195 3'utr Ppa FlyBase G25790.1 TGAACTGCAATATACTGAATGCCTTAATTCCATTTGCAAACTATATATTAT 5 22685161 0.982752713 3 4 37 1 0.602059991 0.5 0 0 4 0 0 4 2R:22685145-22685195 7 Ppa FBtr0343014 22684953 22687104 TGCAATA 7mer-A1 dme-miR-92b-3p 2R - 22685150 22685215 3'utr Ppa FlyBase G19513.1 CGAATTCGATGACCTTTTGTTGAACTGCAATATACTGAATGCCTTAATTCCATTTGCAAACTATAT 6 22685195 0.987558913 6 6 50 1 0.954242509 0.444444444 0.5 0.666666667 6 0 0 9 2R:22685150-22685215 7 3.5 1797 FBgn0020257 1130.93 34.32 53.00666667 0.003094798 0.101981352 0.06602943 -29 5 -12 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 22685402 22685408 - 2R_22685402_22685408_- 0.801970437 0.801970144 0.801970291 2.12E-07 Ppa FBtr0343014|FBtr0343014|FBtr0343014 22684953|22684953|22684953 22687104|22687104|22687104 2R - 22685364 22685457 3'utr Ppa FlyBase G25792.1 AGAGAAGGTAACGATTGAAAAGAATACGCGAATTAATTCTTTTTTCTATTGTGATATAAAATGTATTGTATAAAAAAGAACACATAAGCAAGCA 60 22685409 0.993571404 13 51 628 0.844155844 0.967815317 0.064935065 0.233333333 0.402597403 60 6 6 65 2R:22685364-22685457 7 Ppa FBtr0343014|FBtr0343014|FBtr0343014 22684953|22684953|22684953 22687104|22687104|22687104 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 22685361 22685457 3'utr Ppa FlyBase G19514.1 AGAGAAGGTAACGATTGAAAAGAATACGCGAATTAATTCTTTTTTCTATTGTGATATAAAATGTATTGTATAAAAAAGAACACATAAGCAAGCAGCA 49 22685409 0.984489713 12 45 482 0.905405405 1.047923552 0.094594595 0.408163265 0.608108108 49 2 5 67 2R:22685361-22685457 7 41.5 1798 FBgn0020257 1130.93 34.32 53.00666667 0.036695463 1.209207459 0.782920387 1 1 1 0.01 dme-miR-79-3p 7mer-m8 TAGCTTT 2R 22686980 22686986 - 2R_22686980_22686986_- 0.620204031 0.619918869 0.62006145 0.000201596 Ppa FBtr0343014|FBtr0071924 22684953|22685523 22687104|22687104 2R - 22686966 22687046 5'utr Ppa FlyBase G25793.1 ATTCCCAACCATAGATTCCGGGCGGGAAAGAGAGGGCAGACAAGATACACTGAAAACTCATAGCTTTCGTTTGCCATACCA 55 22687000 0.959040854 11 52 256 0.969230769 1.799340549 0.246153846 0.181818182 0.307692308 55 2 0 63 2R:22686966-22687046 7 Ppa FBtr0343014|FBtr0071924 22684953|22685523 22687104|22687104 TAGCTTT 7mer-m8 dme-miR-79-3p 2R - 22686972 22687049 5'utr Ppa FlyBase G19515.1 ATAATTCCCAACCATAGATTCCGGGCGGGAAAGAGAGGGCAGACAAGATACACTGAAAACTCATAGCTTTCGTTTGCC 28 22686977 0.973391808 10 24 130 0.894736842 1.531478917 0.342105263 0.214285714 0.421052632 28 4 0 34 2R:22686972-22687049 7 25.5 1799 FBgn0020257 1130.93 34.32 53.00666667 0.022547815 0.743006993 0.481071563 14 -9 2.5 0.01 dme-miR-34-5p 6mer2-7 ACTGCC 2R 22692827 22692832 - 2R_22692827_22692832_- 1 1 1 0 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 2R - 22692787 22692854 3'utr robo FlyBase G25801.1 GAAACCAACTTGCTTGAGTTGAACTGCCCTTCCGTAGCCATATACATATAGAGAAAGCATAGTTGGGT 124 22692825 0.762779106 9 123 868 0.993421053 1.877946952 0.25 0.185483871 0.335526316 124 0 1 151 2R:22692787-22692854 6 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 ACTGCC 6mer2-7 dme-miR-34-5p 2R - 22692766 22692854 3'utr robo FlyBase G19522.1 GAAACCAACTTGCTTGAGTTGAACTGCCCTTCCGTAGCCATATACATATAGAGAAAGCATAGTTGGGTCTGGGTTTTAATAATTAGCAA 83 22692825 0.977956071 10 82 558 0.991735537 1.77815125 0.214876033 0.361445783 0.561983471 83 0 1 120 2R:22692766-22692854 6 96.5 1800 FBgn0005631 940.4766667 16.89666667 25.92333333 0.102607543 5.711185638 3.722515109 -7 -7 -7 0.01 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG 2R 22693469 22693475 - 2R_22693469_22693475_- 0.67973901 0.696634774 0.688186892 0.011947135 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 2R - 22693422 22693574 3'utr robo FlyBase G25805.1 CGAACCAACCCCAGTTGTCCGTTCCGTTGTCCTGTCCCTGTGCAGATCCCTCCAAGACACAATGTTTTCTACAATCTTGCATTTTGAAAAGTCTAAAATGTACCTGTGATATAACCCCATTATACATTATAGTATTTTAATAATTTTTATATT 358 22693475 0.98091123 24 335 2417 0.934831461 2.619093331 0.139325843 0.187150838 0.346067416 358 29 0 416 2R:22693422-22693574 7 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" 2R - 22693434 22693572 3'utr robo FlyBase G19525.1 AACCAACCCCAGTTGTCCGTTCCGTTGTCCTGTCCCTGTGCAGATCCCTCCAAGACACAATGTTTTCTACAATCTTGCATTTTGAAAAGTCTAAAATGTACCTGTGATATAACCCCATTATACATTATAGTATTTTAAT 205 22693476 0.980634727 17 190 1353 0.918918919 1.957447649 0.094594595 0.326829268 0.533783784 205 22 2 272 2R:22693434-22693572 7 247 1801 FBgn0005631 940.4766667 16.89666667 25.92333333 0.262632778 14.6182679 9.528095667 0 1 0.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2R 22693884 22693890 - 2R_22693884_22693890_- 0.823349562 0.823349562 0.823349562 0 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 2R - 22693859 22693950 3'utr robo FlyBase G25807.1 TGTAGTTAGAACCAAAGTACACCATTTGTACAGCATGTTTTGGGGGCTTTTGAATCGGTCCTAGTCAATAGGCTTGATAGCGATACAATACG 46 22693882 0.980837236 9 43 315 0.967213115 1.770852012 0.229508197 0.260869565 0.442622951 46 2 0 59 2R:22693859-22693950 7 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R - 22693870 22693925 3'utr robo FlyBase G19528.1 TTGTACAGCATGTTTTGGGGGCTTTTGAATCGGTCCTAGTCAATAGGCTTGATAGC 19 22693910 0.743677599 7 18 163 0.961538462 1.096910013 0.076923077 0.315789474 0.5 19 0 1 25 2R:22693870-22693925 7 21.5 1802 FBgn0005631 940.4766667 16.89666667 25.92333333 0.022860748 1.272440324 0.829368651 -8 20 6 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 22694136 22694143 - 2R_22694136_22694143_- 0.500120318 0.500120318 0.500120318 0 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 2R - 22694112 22694297 3'utr robo FlyBase G25808.1 ACTTGTCACAATCATGGGGGCATTGTGCAGCTTTAGCAATTACGAATTTTTCCATTATCACATCTACCAGCGTAGAGACTCATAGACAGGCACAGTGCCCCTTCCCCATCCATGCACCACAGAAATGTTTCCCCAATGGGAAACGAGAACCTTTGTACTTAAGAGACGCGAGTGCTGTACGATAGA 368 22694144 0.961475004 18 354 1902 0.954545455 1.998912904 0.277511962 0.116847826 0.222488038 368 16 3 399 2R:22694112-22694297 8 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 GTACTTAA 8mer-A1 dme-miR-252-5p 2R - 22694116 22694168 3'utr robo FlyBase G19530.1 TCCCCAATGGGAAACGAGAACCTTTGTACTTAAGAGACGCGAGTGCTGTACGA 144 22694144 0.648028922 7 141 760 0.957345972 2.305351369 0.383886256 0.354166667 0.559241706 144 9 0 202 2R:22694116-22694168 8 188.5 1803 FBgn0005631 940.4766667 16.89666667 25.92333333 0.200430278 11.15604656 7.27144143 1 1 1 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 22694494 22694500 - 2R_22694494_22694500_- 0.661615511 0.661615511 0.661615511 0 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 2R - 22694421 22694528 3'utr robo FlyBase G25809.1 AATAGGGGGATTAGGATTAAAGATAGCATCTAGTCTAACTCTTCATTCATATCGAACTGGAAATCAGTCTAGGAACTGAGTGAACTCAAAGTTTCTGCATCAGTTATC 53 22694500 0.981465663 10 51 372 0.951612903 1.770852012 0.112903226 0.150943396 0.274193548 53 3 0 59 2R:22694421-22694528 7 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R - 22694467 22694516 3'utr robo FlyBase G19532.1 AGGATTAAAGATAGCATCTAGTCTAACTCTTCATTCATATCGAACTGGAA 22 22694500 0.721435469 4 17 127 0.793103448 1.06069784 0.068965517 0.227272727 0.413793103 22 5 1 23 2R:22694467-22694516 7 32 1804 FBgn0005631 940.4766667 16.89666667 25.92333333 0.034025299 1.893864668 1.234409155 0 0 0 0.01 dme-miR-92b-3p 8mer-m1 GTGCAATT 2R 22801729 22801736 + 2R_22801729_22801736_+ 0.596698356 0.596698356 0.596698356 0 blw FBtr0071883 22801691 22802180 2R + 22801691 22801754 stop_codon blw FlyBase G18466.1 AAGCATCAGCAGCAAACGAAGAATAGGAGTAGCGGTGCGTGCAATTAACATCATAGATGGCTCG 21 22801744 0.753714101 6 20 116 0.962962963 1.414973348 0.37037037 0.238095238 0.407407407 21 1 0 26 2R:22801691-22801754 8 blw FBtr0071883 22801691 22802180 GTGCAATT 8mer-m1 dme-miR-92b-3p 2R + 22801709 22801752 3'utr blw FlyBase G14049.1 AAGAATAGGAGTAGCGGTGCGTGCAATTAACATCATAGATGGCT 12 22801744 0.91427173 4 11 68 0.944444444 1.230448921 0.055555556 0.333333333 0.555555556 12 1 0 17 2R:22801709-22801752 8 15 1805 FBgn0011211 3676.656667 198.3566667 303.6133333 0.004079794 0.075621355 0.049404945 -15 -15 -15 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2R 22804138 22804143 - 2R_22804138_22804143_- 1 1 1 0 CycB FBtr0309858|FBtr0071911|FBtr0071913|FBtr0071914 22803519|22803519|22803519|22803519 22804293|22804293|22804293|22804293 2R - 22804123 22804179 3'utr CycB FlyBase G25819.1 GCGTATAGTTACCGTAGTCGCATTGCCAACTATCTTTACCTGCATCACCCATCCCTA 51 22804145 0.653371247 8 50 382 0.984615385 1.505149978 0.061538462 0.196078431 0.369230769 51 0 1 64 2R:22804123-22804179 6 CycB FBtr0309858|FBtr0071911|FBtr0071913|FBtr0071914 22803519|22803519|22803519|22803519 22804293|22804293|22804293|22804293 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2R - 22804124 22804167 3'utr CycB FlyBase G19540.1 CGTAGTCGCATTGCCAACTATCTTTACCTGCATCACCCATCCCT 32 22804145 0.632276229 5 27 222 0.844444444 0.880813592 0.088888889 0.34375 0.533333333 32 3 4 38 2R:22804124-22804167 6 38 1806 FBgn0000405 1807.483333 83.51333333 128.11 0.021023707 0.455017163 0.296620092 2 2 2 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2R 22931818 22931824 + 2R_22931818_22931824_+ 0.521223855 0.521223855 0.521223855 0 CG42678 FBtr0345078|FBtr0302769|FBtr0302773|FBtr0345077|FBtr0302768|FBtr0344190|FBtr0302772|FBtr0345079|FBtr0302770|FBtr0302771 22931633|22931278|22931633|22931533|22929536|22931533|22931278|22931633|22931278|22931278 22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044 2R + 22931806 22931843 3'utr CG42678 FlyBase G18491.1 GTGTACTTTGTTTGTGATTCTATTAGAGCTCCGGGCGC 17 22931816 0.618590426 8 16 176 0.818181818 1.255272505 0.181818182 0.176470588 0.363636364 17 4 0 18 2R:22931806-22931843 7 CG42678 FBtr0345077|FBtr0302773|FBtr0302769|FBtr0345078|FBtr0302770|FBtr0302771|FBtr0302772|FBtr0345079|FBtr0344190|FBtr0302768 22931533|22931633|22931278|22931633|22931278|22931278|22931278|22931633|22931533|22929536 22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044 TGTGATT 7mer-m1 dme-miR-308-3p 2R + 22931806 22931826 3'utr CG42678 FlyBase G14067.1 GTGTACTTTGTTTGTGATTCT 5 22931817 0.657456855 3 5 55 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2R:22931806-22931826 7 10.5 1807 FBgn0261564 564.6666667 33.59333333 51.19333333 0.018595041 0.312562016 0.205104831 2 1 1.5 0.01 dme-miR-1012-3p 6mer2-7 TGACTA 2R 22931877 22931882 + 2R_22931877_22931882_+ 1 1 1 0 CG42678 FBtr0345078|FBtr0302769|FBtr0302773|FBtr0345077|FBtr0302768|FBtr0344190|FBtr0302772|FBtr0345079|FBtr0302770|FBtr0302771 22931633|22931278|22931633|22931533|22929536|22931533|22931278|22931633|22931278|22931278 22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044 2R + 22931847 22931898 3'utr CG42678 FlyBase G18492.1 TCGTCCTGGTTGCCACTGGTACTCATTTCGTGACTAGTTTAGCGTTAAGCGA 7 22931872 0.988352294 3 7 64 1 0.84509804 0 0 0 7 0 0 7 2R:22931847-22931898 6 CG42678 FBtr0345077|FBtr0302773|FBtr0302769|FBtr0345078|FBtr0302770|FBtr0302771|FBtr0302772|FBtr0345079|FBtr0344190|FBtr0302768 22931533|22931633|22931278|22931633|22931278|22931278|22931278|22931633|22931533|22929536 22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044 TGACTA 6mer2-7 dme-miR-1012-3p 2R + 22931846 22931897 3'utr CG42678 FlyBase G14068.1 TTCGTCCTGGTTGCCACTGGTACTCATTTCGTGACTAGTTTAGCGTTAAGCG 7 22931872 0.987490085 5 6 55 1 1.079181246 0.333333333 0.571428571 0.75 7 0 0 12 2R:22931846-22931897 6 5.5 1808 FBgn0261564 564.6666667 33.59333333 51.19333333 0.00974026 0.163722961 0.107435864 5 5 5 0.01 dme-miR-308-3p 8mer-m1 CTGTGATT 2R 22934614 22934621 - 2R_22934614_22934621_- 0.385560641 0.385560641 0.385560641 0 CG3800 FBtr0071994|FBtr0303464 22934567|22934567 22936014|22936014 2R - 22934560 22934651 3'utr CG3800 FlyBase G25898.1 ACGATGAAGGAAATGAAAATTCAAATATCACTGTGATTGTTTTTTAATTGTAAATTAAAATGCTGGAGCTGCTGATTTGAGACAAAAAAAAA 107 22934614 0.985027004 20 98 1119 0.906976744 1.767155866 0.046511628 0.158878505 0.302325581 107 11 1 117 2R:22934560-22934651 8 CG3800 FBtr0071994|FBtr0303464 22934567|22934567 22936014|22936014 CTGTGATT 8mer-m1 dme-miR-308-3p 2R - 22934570 22934638 3'utr CG3800 FlyBase G19600.1 TGAAAATTCAAATATCACTGTGATTGTTTTTTAATTGTAAATTAAAATGCTGGAGCTGCTGATTTGAGA 60 22934614 0.991282586 8 58 624 0.990291262 2.008600172 0.029126214 0.516666667 0.718446602 60 1 0 102 2R:22934570-22934638 8 74 1809 FBgn0034802 11327.54667 555.1 855.97 0.006532747 0.133309314 0.086451628 -7 -7 -7 0.01 dme-miR-276a-3p 6mer3-8 AGTTCC 2R 22935229 22935234 - 2R_22935229_22935234_- 1 0.99995395 0.999976975 3.25E-05 CG3800 FBtr0071994|FBtr0303464 22934567|22934567 22936014|22936014 2R - 22935218 22935255 5'utr CG3800 FlyBase G25902.1 AAAGCAAATGATCCTATTAGGAGTTCCACAGCCAGAAA 5 22935239 0.974057801 2 4 24 0.8 0.602059991 0 0 0 5 1 0 4 2R:22935218-22935255 6 CG3800 FBtr0071994|FBtr0303464 22934567|22934567 22936014|22936014 AGTTCC 6mer3-8 dme-miR-276a-3p 2R - 22935218 22935309 5'utr CG3800 FlyBase G19604.1 GGAATGAAACTATATAAGATTATATAAAGAAAAATACCTTAAAGAATACTATTTAAAGCAAATGATCCTATTAGGAGTTCCACAGCCAGAAA 13 22935238 0.980217687 12 12 66 1 1.278753601 0.105263158 0.307692308 0.526315789 13 0 0 19 2R:22935218-22935309 6 4.5 1810 FBgn0034802 11327.54667 555.1 855.97 0.000397262 0.008106647 0.005257194 5 4 4.5 0.01 dme-miR-1006-3p 7mer-A1 GAATTTA 2R 22935330 22935336 - 2R_22935330_22935336_- 0.823349562 0.823349562 0.823349562 0 CG3800 FBtr0071994|FBtr0303464 22934567|22934567 22936014|22936014 2R - 22935271 22935378 5'utr CG3800 FlyBase G25903.1 TAATTATACCTATATGATTATATGATTATGCTGCAAGTGTTTGAATTTACTAATTACATTATAACGAATGGAATGAAACTATATAAGATTATATAAAGAAAAATACCT 26 22935338 0.986494315 16 23 195 0.892857143 1.397940009 0.178571429 0.076923077 0.142857143 26 3 0 25 2R:22935271-22935378 7 CG3800 FBtr0071994|FBtr0303464 22934567|22934567 22936014|22936014 GAATTTA 7mer-A1 dme-miR-1006-3p 2R - 22935312 22935372 5'utr CG3800 FlyBase G19604.2 TACCTATATGATTATATGATTATGCTGCAAGTGTTTGAATTTACTAATTACATTATAACGA 19 22935339 0.901070562 9 14 164 0.84375 0.954242509 0.28125 0.578947368 0.75 19 3 2 27 2R:22935312-22935372 7 12.5 1811 FBgn0034802 11327.54667 555.1 855.97 0.001103505 0.022518465 0.014603316 2 3 2.5 0.01 dme-miR-2a-2-5p 7mer-A1 GATGAGA 2R 22935431 22935437 - 2R_22935431_22935437_- 0.782911824 0.782911824 0.782911824 0 CG3800 FBtr0071994|FBtr0303464 22934567|22934567 22936014|22936014 2R - 22935405 22935548 5'utr CG3800 FlyBase G25904.1 AGAAGACGATAGCCAACGGCAGCTGTGCAGCCGAGAGAGCAGATGACACCGACGACGAGGAAGAGGATGAGGTAGAAGATGAGGAAGAAGACACGACGACCCAATTTGTAAGATGAGACTAAACCACAACAGCAACAACAAAAG 363 22935435 0.938356045 12 352 1369 0.96912114 2.309630167 0.104513064 0.14600551 0.263657957 363 12 1 408 2R:22935405-22935548 7 CG3800 FBtr0071994|FBtr0303464 22934567|22934567 22936014|22936014 GATGAGA 7mer-A1 dme-miR-2a-2-5p 2R - 22935394 22935548 5'utr CG3800 FlyBase G19605.1 AGAAGACGATAGCCAACGGCAGCTGTGCAGCCGAGAGAGCAGATGACACCGACGACGAGGAAGAGGATGAGGTAGAAGATGAGGAAGAAGACACGACGACCCAATTTGTAAGATGAGACTAAACCACAACAGCAACAACAAAAGAAATCACCAAG 241 22935435 0.930028914 11 233 846 0.971910112 2.539076099 0.070224719 0.340248963 0.553370787 241 10 0 346 2R:22935394-22935548 7 284 1812 FBgn0034802 11327.54667 555.1 855.97 0.025071625 0.511619528 0.331787329 -2 -2 -2 0.01 dme-miR-980-3p 6mer2-7 GCAGCT 2R 22938801 22938806 + 2R_22938801_22938806_+ 1 1 1 0 CG9849 FBtr0302895|FBtr0071951 22938783|22938783 22939025|22939025 2R + 22938764 22938822 stop_codon CG9849 FlyBase G18494.1 CCGCCGTGGCTGGGCTGGTGACGTGATCGGATTACATGCAGCTCAAAGGACTCGTGTGA 22 22938800 0.857419269 5 21 132 0.958333333 1.361727836 0.208333333 0.090909091 0.166666667 22 1 0 23 2R:22938764-22938822 6 CG9849 FBtr0302895|FBtr0071951 22938783|22938783 22939025|22939025 GCAGCT 6mer2-7 dme-miR-980-3p 2R + 22938779 22938822 stop_codon CG9849 FlyBase G14069.1 TGGTGACGTGATCGGATTACATGCAGCTCAAAGGACTCGTGTGA 9 22938800 0.785550638 3 9 48 1 1.322219295 0.238095238 0.777777778 0.904761905 9 0 0 21 2R:22938779-22938822 6 14.5 1813 FBgn0034803 110.3333333 14.92666667 22.72333333 0.13141994 0.971415811 0.638110606 1 1 1 0.01 dme-miR-8-3p 6mer2-7 AGTATT 2R 23061899 23061904 - 2R_23061899_23061904_- 1 1 1 0 l(2)06496 FBtr0336732|FBtr0071985 23061418|23061418 23061931|23061931 2R - 23061894 23061937 stop_codon l(2)06496 FlyBase G25914.1 GATTGAGCGGATATAGATCCAAAGACTGCTGAAAGTATTTTATA 36 23061908 0.766403908 8 34 163 0.951219512 1.290034611 0.292682927 0.138888889 0.243902439 36 1 1 39 2R:23061894-23061937 6 l(2)06496 FBtr0071985 23061418 23061931 AGTATT 6mer2-7 dme-miR-8-3p 2R - 23061881 23061933 stop_codon l(2)06496 FlyBase G19613.1 GAGCGGATATAGATCCAAAGACTGCTGAAAGTATTTTATACGACCCCGTTTCC 29 23061908 0.966433693 6 24 127 0.76744186 0.6734159 0.279069767 0.344827586 0.558139535 29 4 6 33 2R:23061881-23061933 6 19.5 1814 FBgn0010622 174.3333333 19.28333333 29.72666667 0.111854685 1.011235955 0.655976676 4 4 4 0.01 dme-miR-283-5p 6mer3-8 TGATAT 2R 23071589 23071594 + 2R_23071589_23071594_+ 1 1 1 0 l(2)k09913 FBtr0071960|FBtr0343188|FBtr0343192|FBtr0071959|FBtr0343191|FBtr0071961|FBtr0343189|FBtr0343190|FBtr0071958 23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554 23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875 2R + 23071539 23071725 stop_codon l(2)k09913 FlyBase G18510.1 AGCGCGCCAAGTTGTAGGTGTCTCTAACGAGGAGCGGCTGATCAGTTCAGTGATATACATTTATTCAAGAATCAATGCGATTATGATTTTACCCTAGTTGCTAAGACCTAAAGATTAACGAGCAATGTAAAACCAATGTCCTCTTTGAATGATTATGATCTGTGTGTCTCTCGCGAGGCAGAATCTT 284 23071584 0.986472032 37 272 2343 0.964391691 2.034762106 0.228486647 0.151408451 0.284866469 284 10 2 325 2R:23071539-23071725 6 l(2)k09913 FBtr0071961|FBtr0343191|FBtr0343190|FBtr0071958|FBtr0343189|FBtr0343188|FBtr0071960|FBtr0071959|FBtr0343192 23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554 23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875 TGATAT 6mer3-8 dme-miR-283-5p 2R + 23071564 23071722 3'utr l(2)k09913 FlyBase G14081.1 AACGAGGAGCGGCTGATCAGTTCAGTGATATACATTTATTCAAGAATCAATGCGATTATGATTTTACCCTAGTTGCTAAGACCTAAAGATTAACGAGCAATGTAAAACCAATGTCCTCTTTGAATGATTATGATCTGTGTGTCTCTCGCGAGGCAGAAT 168 23071584 0.893394118 23 159 1351 0.940677966 2.346352974 0.266949153 0.297619048 0.5 168 14 0 222 2R:23071564-23071722 6 71.5 1815 FBgn0021979 722.6 59.48666667 89.72333333 0.098948242 1.201950017 0.796894156 5 5 5 0.01 dme-bantam-3p 6mer3-8 TGATCT 2R 23071694 23071699 + 2R_23071694_23071699_+ 1 1 1 0 l(2)k09913 FBtr0071960|FBtr0343188|FBtr0343192|FBtr0071959|FBtr0343191|FBtr0071961|FBtr0343189|FBtr0343190|FBtr0071958 23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554 23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875 2R + 23071539 23071725 stop_codon l(2)k09913 FlyBase G18510.1 AGCGCGCCAAGTTGTAGGTGTCTCTAACGAGGAGCGGCTGATCAGTTCAGTGATATACATTTATTCAAGAATCAATGCGATTATGATTTTACCCTAGTTGCTAAGACCTAAAGATTAACGAGCAATGTAAAACCAATGTCCTCTTTGAATGATTATGATCTGTGTGTCTCTCGCGAGGCAGAATCTT 284 23071694 0.986472032 37 272 2343 0.964391691 2.034762106 0.228486647 0.151408451 0.284866469 284 10 2 325 2R:23071539-23071725 6 l(2)k09913 FBtr0071961|FBtr0343191|FBtr0343190|FBtr0071958|FBtr0343189|FBtr0343188|FBtr0071960|FBtr0071959|FBtr0343192 23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554 23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875 TGATCT 6mer3-8 dme-bantam-3p 2R + 23071564 23071722 3'utr l(2)k09913 FlyBase G14081.1 AACGAGGAGCGGCTGATCAGTTCAGTGATATACATTTATTCAAGAATCAATGCGATTATGATTTTACCCTAGTTGCTAAGACCTAAAGATTAACGAGCAATGTAAAACCAATGTCCTCTTTGAATGATTATGATCTGTGTGTCTCTCGCGAGGCAGAAT 168 23071694 0.893394118 23 159 1351 0.940677966 2.346352974 0.266949153 0.297619048 0.5 168 14 0 222 2R:23071564-23071722 6 112 1816 FBgn0021979 722.6 59.48666667 89.72333333 0.154995848 1.882774852 1.248281755 0 0 0 0.01 dme-miR-33-5p 7mer-m1 AATGCAC 2R 23071789 23071795 + 2R_23071789_23071795_+ 0.829692068 0.829692068 0.829692068 0 l(2)k09913 FBtr0071960|FBtr0343188|FBtr0343192|FBtr0071959|FBtr0343191|FBtr0071961|FBtr0343189|FBtr0343190|FBtr0071958 23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554 23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875 2R + 23071771 23071849 3'utr l(2)k09913 FlyBase G18511.1 TTCATCAACCGAGAGAAGAATGCACTACGCCTCTATATTGTTACATATATTTTGAGATCGCTGCAAAACAGCTAAATAA 23 23071791 0.972095263 4 23 141 1 1.431363764 0.185185185 0.130434783 0.259259259 23 0 0 27 2R:23071771-23071849 7 l(2)k09913 FBtr0071961|FBtr0343191|FBtr0343190|FBtr0071958|FBtr0343189|FBtr0343188|FBtr0071960|FBtr0071959|FBtr0343192 23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554 23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875 AATGCAC 7mer-m1 dme-miR-33-5p 2R + 23071728 23071793 3'utr l(2)k09913 FlyBase G14082.1 AAAGCCCGCACGGGAAATTCCTAGGCTAAGCTTAAAGTCGTATTTCATCAACCGAGAGAAGAATGC 8 23071791 0.982132218 4 5 28 0.8 0.602059991 0.2 0.25 0.4 8 1 1 8 2R:23071728-23071793 5 6.5 1817 FBgn0021979 722.6 59.48666667 89.72333333 0.008995295 0.109268183 0.072444923 -2 -2 -2 0.01 dme-miR-304-5p 6mer3-8 TGAGAT 2R 23071823 23071828 + 2R_23071823_23071828_+ 1 1 1 0 l(2)k09913 FBtr0071960|FBtr0343188|FBtr0343192|FBtr0071959|FBtr0343191|FBtr0071961|FBtr0343189|FBtr0343190|FBtr0071958 23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554 23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875 2R + 23071771 23071849 3'utr l(2)k09913 FlyBase G18511.1 TTCATCAACCGAGAGAAGAATGCACTACGCCTCTATATTGTTACATATATTTTGAGATCGCTGCAAAACAGCTAAATAA 23 23071822 0.972095263 4 23 141 1 1.431363764 0.185185185 0.130434783 0.259259259 23 0 0 27 2R:23071771-23071849 6 l(2)k09913 FBtr0071961|FBtr0343191|FBtr0343190|FBtr0071958|FBtr0343189|FBtr0343188|FBtr0071960|FBtr0071959|FBtr0343192 23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554 23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875 TGAGAT 6mer3-8 dme-miR-304-5p 2R + 23071807 23071848 3'utr l(2)k09913 FlyBase G14083.1 ATTGTTACATATATTTTGAGATCGCTGCAAAACAGCTAAATA 14 23071822 0.703581161 3 13 108 0.95 1.278753601 0 0.428571429 0.6 14 1 0 19 2R:23071807-23071848 6 13.5 1818 FBgn0021979 722.6 59.48666667 89.72333333 0.018682535 0.226941612 0.150462533 1 1 1 0.01 dme-bantam-3p 7mer-m8 TGATCTC 2R 23355188 23355194 + 2R_23355188_23355194_+ 0.661615243 0.661615243 0.661615243 0 CG30409 FBtr0072004|FBtr0305674 23354922|23354922 23355321|23355321 2R + 23355169 23355208 5'utr CG30409 FlyBase G18522.1 AAATCCCGCACCGGCGGCTTGATCTCTGTGACATTGAAGT 14 23355187 0.790699754 3 13 80 0.9375 1.176091259 0.25 0.142857143 0.25 14 1 0 15 2R:23355169-23355208 7 CG30409 FBtr0305674|FBtr0072004 23354922|23354922 23355321|23355321 TGATCTC 7mer-m8 dme-bantam-3p 2R + 23355170 23355200 5'utr CG30409 FlyBase G14091.1 AATCCCGCACCGGCGGCTTGATCTCTGTGAC 11 23355187 0.71377672 3 11 58 1 1.255272505 0.722222222 0.545454545 0.722222222 11 0 0 18 2R:23355170-23355200 7 12.5 1819 FBgn0050409 2.333333333 0.296666667 0.423333333 5.357142857 42.13483146 29.52755906 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2R 23355266 23355272 + 2R_23355266_23355272_+ 0.823349562 0.823349562 0.823349562 0 CG30409 FBtr0072004|FBtr0305674 23354922|23354922 23355321|23355321 2R + 23355253 23355320 5'utr CG30409 FlyBase G18523.1 TGCGACGAGGCGTCCAAAGAGCACGGTTCACCTTCACCCAGCAACTCGGCGAAGATCTTTTGAGCGGC 10 23355285 0.960759977 5 7 43 0.727272727 0.903089987 0.090909091 0.1 0.181818182 10 3 0 8 2R:23355253-23355320 7 CG30409 FBtr0305674|FBtr0072004 23354922|23354922 23355321|23355321 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 23355267 23355321 5'utr CG30409 FlyBase G14092.1 CAAAGAGCACGGTTCACCTTCACCCAGCAACTCGGCGAAGATCTTTTGAGCGGCG 8 23355285 0.935974327 4 7 33 0.923076923 1.079181246 0.538461538 0.5 0.692307692 8 1 0 12 2R:23355267-23355321 5 6 1820 FBgn0050409 2.333333333 0.296666667 0.423333333 2.571428571 20.2247191 14.17322835 -19 -19 -19 0.01 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 23356109 23356116 + 2R_23356109_23356116_+ 0.625364269 0.625364269 0.625364269 0 Rpi FBtr0301852|FBtr0305675 23356078|23356078 23356192|23356441 2R + 23356082 23356152 3'utr Rpi FlyBase G18526.1 CTTGGGCGGAGTTGGGGGAGCGCTTTTTGCATTTATGTTTCACCAAGTTGTTCCTTAAATTTTAGGTTTGC 41 23356108 0.74232017 10 41 406 1 1.698970004 0.08 0.195121951 0.34 41 0 0 50 2R:23356082-23356152 8 Rpi FBtr0305675 23356078 23356441 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 23356078 23356153 stop_codon Rpi FlyBase G14095.1 AGTTCTTGGGCGGAGTTGGGGGAGCGCTTTTTGCATTTATGTTTCACCAAGTTGTTCCTTAAATTTTAGGTTTGCC 41 23356108 0.736360172 10 40 419 1 1.785329835 0.098360656 0.317073171 0.540983607 41 0 0 61 2R:23356078-23356153 8 27 1821 FBgn0050410 217.7933333 24.45 37.62 0.123970737 1.104294479 0.717703349 1 1 1 0.01 dme-miR-932-5p 6mer2-7 GAATTG 2R 23359157 23359162 + 2R_23359157_23359162_+ 1 1 1 0 CG34423 FBtr0301854|FBtr0112724 23359099|23359099 23359204|23359204 2R + 23359109 23359171 3'utr CG34423 FlyBase G18529.1 AGGAGCTTTGAACTCCACTAGCTTAACTATGGTTAGGCTGGATTGTCTGAATTGTATTTAATG 20 23359147 0.985482393 5 20 164 1 1.462397998 0.275862069 0.3 0.517241379 20 0 0 29 2R:23359109-23359171 6 CG34423 FBtr0112724|FBtr0301854 23359099|23359099 23359204|23359204 GAATTG 6mer2-7 dme-miR-932-5p 2R + 23359117 23359172 3'utr CG34423 FlyBase G14097.1 TGAACTCCACTAGCTTAACTATGGTTAGGCTGGATTGTCTGAATTGTATTTAATGG 11 23359148 0.988994073 4 10 91 0.928571429 1.113943352 0.357142857 0.181818182 0.357142857 11 1 0 13 2R:23359117-23359172 6 12.5 1822 FBgn0085452 42.98333333 13.67333333 21.07666667 0.290810392 0.914188201 0.593072908 10 9 9.5 0.01 dme-miR-1002-5p 6mer3-8 CTACTT 2R 23371601 23371606 - 2R_23371601_23371606_- 0.999942655 0.999897174 0.999919915 3.22E-05 Golgin245 FBtr0072036 23371358 23371842 2R - 23371447 23371614 3'utr Golgin245 FlyBase G25951.1 AAGTATAGCTACTTCTGTCCAAATCCACGCTAAGCACTTTTGTACATTTTGATTACGCTTTCCTTTGTTTCATTCACTTGCTTGCGCTCCATGTCCCATGTCCACGACTTACCTTAACCCCAGCCTAACCTAAGTGCAATCGTTTTGTGTATTTTAGTTGTAAGTTTA 334 23371602 0.850153201 24 329 2448 0.985185185 2.2999429 0.111111111 0.173652695 0.318518519 334 5 1 399 2R:23371447-23371614 6 Golgin245 FBtr0072036 23371358 23371842 CTACTT 6mer3-8 dme-miR-1002-5p 2R - 23371485 23371615 3'utr Golgin245 FlyBase G19638.1 TAAGTATAGCTACTTCTGTCCAAATCCACGCTAAGCACTTTTGTACATTTTGATTACGCTTTCCTTTGTTTCATTCACTTGCTTGCGCTCCATGTCCCATGTCCACGACTTACCTTAACCCCAGCCTAACC 179 23371602 0.897360209 14 179 1190 1 2.456366033 0.059440559 0.430167598 0.643356643 179 0 0 286 2R:23371485-23371615 6 200 1823 FBgn0034854 1865.833333 44.14333333 67.57666667 0.10719071 4.530695462 2.95960144 -4 -4 -4 0.01 dme-miR-304-5p 6mer2-7 GAGATT 2R 23371812 23371817 - 2R_23371812_23371817_- 1 1 1 0 Golgin245 FBtr0072036 23371358 23371842 2R - 23371739 23371874 lincRNA_intron-lincRNA_exon Golgin245 FlyBase G25953.1 ACAAACACTTGCAGCTGAACAAACTGATCTAGCATGAACTGATGGCTCTCTACGGCGGAGATTGGAACTGGGAGCCCTGCCCGGTGGCGCTTCTAGACCGCAAATGATGTCGGAGATCACAAGTACCTTATACTTA 29 23371832 0.836401609 16 28 125 0.970588235 1.217483944 0.264705882 0.172413793 0.294117647 29 0 1 33 2R:23371739-23371874 6 Golgin245 FBtr0072036 23371358 23371842 GAGATT 6mer2-7 dme-miR-304-5p 2R - 23371742 23371877 lincRNA_intron-lincRNA_exon Golgin245 FlyBase G19639.1 AATACAAACACTTGCAGCTGAACAAACTGATCTAGCATGAACTGATGGCTCTCTACGGCGGAGATTGGAACTGGGAGCCCTGCCCGGTGGCGCTTCTAGACCGCAAATGATGTCGGAGATCACAAGTACCTTATAC 19 23371840 0.962609248 12 18 90 0.965517241 1.447158031 0.310344828 0.263157895 0.517241379 19 1 0 28 2R:23371742-23371877 6 4.5 1824 FBgn0034854 1865.833333 44.14333333 67.57666667 0.002411791 0.101940648 0.066591032 15 23 19 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 2R 23377977 23377983 - 2R_23377977_23377983_- 0.620204266 0.620204266 0.620204266 0 CG13551 FBtr0072033|FBtr0072034 23377864|23377864 23378048|23378048 2R - 23377876 23377997 3'utr CG13551 FlyBase G25966.1 GACATTTACTAAAATGCATTTCACTCTCTTTTGTATGTTCCCAAGTGCTCACTACCACTTACCAGTAACCCAAAAATTATATATGTATTTGAAAAGTGCGTAATAAACCATCCATATTTTGA 27 23377962 0.984391864 18 26 211 1 1.505149978 0.21875 0.111111111 0.25 27 0 0 32 2R:23377876-23377997 7 CG13551 FBtr0072034|FBtr0072033 23377864|23377864 23378048|23378048 TGCATTT 7mer-m8 dme-miR-277-3p 2R - 23377907 23377998 3'utr CG13551 FlyBase G19651.1 AGACATTTACTAAAATGCATTTCACTCTCTTTTGTATGTTCCCAAGTGCTCACTACCACTTACCAGTAACCCAAAAATTATATATGTATTTG 14 23377962 0.978445615 10 14 95 1 1.322219295 0.047619048 0.285714286 0.523809524 14 0 0 21 2R:23377907-23377998 7 2.5 1825 FBgn0040660 1029.333333 229.2433333 349.6133333 0.002428756 0.010905443 0.007150757 -21 -21 -21 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT 2R 23385930 23385935 - 2R_23385930_23385935_- 1 1 1 0 CG30415 FBtr0072030|FBtr0072031 23385676|23385462 23385977|23385977 2R - 23385882 23385981 stop_codon CG30415 FlyBase G25969.1 CTAGGCGGCCAGTAACTTAGTCTTAATTGTCGCATCAACATTTCAGAGCTGTTTGTGTCGGACCCAACGTGAAATCGGCGAATAAATGATTTGAAACGAG 27 23385928 0.980755482 12 25 176 0.9375 1 0.15625 0.185185185 0.3125 27 0 2 30 2R:23385882-23385981 6 CG30415 FBtr0072031|FBtr0072030 23385462|23385676 23385977|23385977 AGCTGT 6mer3-8 dme-miR-1008-3p 2R - 23385884 23385950 3'utr CG30415 FlyBase G19654.1 GCATCAACATTTCAGAGCTGTTTGTGTCGGACCCAACGTGAAATCGGCGAATAAATGATTTGAAACG 15 23385928 0.988338566 7 12 112 0.857142857 1.255272505 0.380952381 0.333333333 0.523809524 15 3 0 18 2R:23385884-23385950 6 14.5 1826 FBgn0250838 841 182.8166667 280.3366667 0.017241379 0.079314432 0.051723523 -7 -7 -7 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 2R 23389315 23389320 - 2R_23389315_23389320_- 1 1 1 0 CG3530 FBtr0112940|FBtr0072028|FBtr0072029 23389007|23389007|23389007 23389520|23389520|23389520 2R - 23389282 23389351 3'utr CG3530 FlyBase G25973.1 ATCCACCAGCGATTGGCTTCCAGGCATCGTCCTAGTCTATAAGCCGGGCACAAAACTGTATTTTGTTATT 7 23389339 0.965256377 4 7 40 1 0.954242509 0.111111111 0.142857143 0.333333333 7 0 0 9 2R:23389282-23389351 6 CG3530 FBtr0072029|FBtr0112940|FBtr0072028 23389007|23389007|23389007 23389520|23389520|23389520 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 2R - 23389271 23389344 3'utr CG3530 FlyBase G19656.1 AGCGATTGGCTTCCAGGCATCGTCCTAGTCTATAAGCCGGGCACAAAACTGTATTTTGTTATTAGAATCTAGAG 12 23389314 0.975351629 7 12 75 1 1.146128036 0.285714286 0.166666667 0.285714286 12 0 0 14 2R:23389271-23389344 6 7.5 1827 FBgn0028497 778.9933333 33.31 50.96666667 0.00962781 0.22515761 0.147155003 19 -6 6.5 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 2R 23421617 23421622 - 2R_23421617_23421622_- 0.997456273 0.999994999 0.998725636 0.001795132 CG9815 FBtr0072024|FBtr0113111|FBtr0343264|FBtr0343263 23421519|23421519|23421519|23421519 23421708|23421708|23421708|23421708 2R - 23421522 23421688 3'utr CG9815 FlyBase G25981.1 AGTAGTTGTGCGTGAATGTTGTAATTTCTGTCAGTGTATGTGCATTTTGACCCTTGTGATATATGTATGTGACTTTGCTGTAAGCCTAGACTAAGGATATTTATGTCCAGCCACAAGAAAATTCCAAAAAAATATTAGAATGTAGAATAAATGTTATGTGTAAAATC 617 23421615 0.964558232 35 572 5619 0.918421053 1.889612913 0.269736842 0.183144246 0.336842105 617 54 8 698 2R:23421522-23421688 6 CG9815 FBtr0343264|FBtr0343263|FBtr0072024|FBtr0113111 23421519|23421519|23421519|23421519 23421708|23421708|23421708|23421708 ATGTGA 6mer3-8 dme-miR-1003-3p 2R - 23421588 23421688 3'utr CG9815 FlyBase G19659.2 AGTAGTTGTGCGTGAATGTTGTAATTTCTGTCAGTGTATGTGCATTTTGACCCTTGTGATATATGTATGTGACTTTGCTGTAAGCCTAGACTAAGGATATT 441 23421615 0.72630689 27 401 4102 0.911504425 1.790988475 0.315634218 0.410430839 0.616519174 441 51 9 618 2R:23421588-23421688 6 346 1828 FBgn0034861 0 0 0 Inf Inf Inf -7 -7 -7 0.01 dme-miR-277-3p 6mer2-7 GCATTT 2R 23421694 23421699 - 2R_23421694_23421699_- 1 1 1 0 CG9815 FBtr0072024|FBtr0113111|FBtr0343264|FBtr0343263 23421519|23421519|23421519|23421519 23421708|23421708|23421708|23421708 2R - 23421691 23421752 stop_codon CG9815 FlyBase G25982.1 GTGCCCATCCCAGTGGGCAACGGATGCGCGAGGAGATGGCGTAATCTTGGGCCGCATTTTAG 12 23421706 0.95010532 7 12 53 1 1.204119983 0.5 0.166666667 0.375 12 0 0 16 2R:23421691-23421752 6 CG9815 FBtr0343264|FBtr0343263|FBtr0072024|FBtr0113111 23421519|23421519|23421519|23421519 23421708|23421708|23421708|23421708 GCATTT 6mer2-7 dme-miR-277-3p 2R - 23421695 23421752 stop_codon CG9815 FlyBase G19660.1 GTGCCCATCCCAGTGGGCAACGGATGCGCGAGGAGATGGCGTAATCTTGGGCCGCATT 9 23421706 0.932948593 6 8 34 0.923076923 1.079181246 0.384615385 0.444444444 0.615384615 9 1 0 12 2R:23421695-23421752 4 5.5 1829 FBgn0034861 0 0 0 Inf Inf Inf 7 7 7 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2R 23491136 23491141 + 2R_23491136_23491141_+ 1 1 1 0 CG43795 FBtr0331989 23490922 23491997 2R + 23491100 23491158 3'utr CG43795 FlyBase G18552.1 CGAAAATGTTTTATGCTTAGGCCAGTTGAATTATCAAAGACTTTACTAAATTATATTTG 21 23491143 0.984930478 9 20 163 0.962962963 1.414973348 0.185185185 0.238095238 0.407407407 21 1 0 26 2R:23491100-23491158 6 CG43795 FBtr0331989 23490922 23491997 AAGACT 6mer3-8 dme-miR-14-3p 2R + 23491096 23491157 3'utr CG43795 FlyBase G14108.1 CAATCGAAAATGTTTTATGCTTAGGCCAGTTGAATTATCAAAGACTTTACTAAATTATATTT 18 23491144 0.984776396 6 18 149 1 1.380211242 0.041666667 0.222222222 0.416666667 18 0 0 24 2R:23491096-23491157 6 17.5 1830 FBgn0264339 32.66666667 0.67 1.033333333 0.535714286 26.11940299 16.93548387 -7 -8 -7.5 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 2R 23519884 23519890 - 2R_23519884_23519890_- 0.782911824 0.782911824 0.782911824 0 RabX1 FBtr0072120 23519837 23520357 2R - 23519848 23519910 3'utr RabX1 FlyBase G25992.1 TAACACAAACACCAATTCATGTACAAAGCATTTTATACTGCATGCCTATAATAAATGTAAATG 15 23519895 0.953792759 4 15 71 1 1.255272505 0 0.133333333 0.277777778 15 0 0 18 2R:23519848-23519910 7 RabX1 FBtr0072120 23519837 23520357 GTACAAA 7mer-A1 dme-miR-305-5p 2R - 23519852 23519906 3'utr RabX1 FlyBase G19668.1 ACAAACACCAATTCATGTACAAAGCATTTTATACTGCATGCCTATAATAAATGTA 10 23519894 0.923300996 6 10 45 1 1.176091259 0 0.2 0.466666667 10 0 0 15 2R:23519852-23519906 7 11 1831 FBgn0015372 359.1933333 26.49333333 40.52 0.030624176 0.415198792 0.271470879 5 4 4.5 0.01 dme-miR-1008-3p 7mer-m8 AGCTGTG 2R 23520065 23520071 - 2R_23520065_23520071_- 0.671795829 0.671795832 0.671795831 0 RabX1 FBtr0072120 23519837 23520357 2R - 23520023 23520182 3'utr RabX1 FlyBase G25993.1 TTGGCTTGAAGCTATGTATTAGATCACTGATTAGGCTAGATCCAGGATCCCCTCGATCCACTGACAAGGCGCTGCGACAACCGCTTCATCATAATCTTAGTTCTTAATGACAGCTGTGTACAGCAATTGCCGCGTGCATATTATGACTTTATACACTCGT 64 23520075 0.849084846 21 58 456 0.9 1.556302501 0.2 0.203125 0.3625 64 7 1 72 2R:23520023-23520182 7 RabX1 FBtr0072120 23519837 23520357 AGCTGTG 7mer-m8 dme-miR-1008-3p 2R - 23520028 23520093 3'utr RabX1 FlyBase G19669.1 CATAATCTTAGTTCTTAATGACAGCTGTGTACAGCAATTGCCGCGTGCATATTATGACTTTATACA 24 23520075 0.894445287 8 21 195 0.916666667 1.51851394 0.194444444 0.375 0.583333333 24 3 0 33 2R:23520028-23520093 7 16 1832 FBgn0015372 359.1933333 26.49333333 40.52 0.044544257 0.603925516 0.394866732 4 4 4 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 23520325 23520330 - 2R_23520325_23520330_- 1 1 1 0 RabX1 FBtr0072120|FBtr0072120|FBtr0072120 23519837|23519837|23519837 23520357|23520357|23520357 2R - 23520282 23520358 stop_codon RabX1 FlyBase G25994.1 AGATCTATCAGATCCCCAGGATCCACATCTGTGAAAGAACCAATGTGATTTTAACAGAACCAGACTGCAGTTCGAAT 103 23520331 0.784510395 9 101 434 1 2.064457989 0.25 0.106796117 0.206896552 103 0 0 116 2R:23520282-23520358 6 RabX1 FBtr0072120|FBtr0072120|FBtr0072120 23519837|23519837|23519837 23520357|23520357|23520357 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 23520274 23520352 3'utr RabX1 FlyBase G19671.1 ATCAGATCCCCAGGATCCACATCTGTGAAAGAACCAATGTGATTTTAACAGAACCAGACTGCAGTTCGAATATGGGCTC 80 23520331 0.943054685 11 80 352 1 2.113943352 0.192307692 0.4375 0.653846154 80 0 0 130 2R:23520274-23520352 6 72.5 1833 FBgn0015372 359.1933333 26.49333333 40.52 0.201841163 2.736537494 1.789239882 1 1 1 0.01 dme-miR-33-5p 8mer-A1 CAATGCAA 2R 23528178 23528185 + 2R_23528178_23528185_+ 0.634552243 0.634552243 0.634552243 0 mi FBtr0072058 23527637 23528260 2R + 23528153 23528205 3'utr mi FlyBase G18577.1 TTTACTTAACTACCGCACGAGTACTCAATGCAACTGAAATTAAGCTGAAGCAA 27 23528177 0.752974174 8 26 134 0.96969697 1.505149978 0.393939394 0.185185185 0.333333333 27 1 0 32 2R:23528153-23528205 8 mi FBtr0072058 23527637 23528260 CAATGCAA 8mer-A1 dme-miR-33-5p 2R + 23528160 23528199 3'utr mi FlyBase G14126.1 AACTACCGCACGAGTACTCAATGCAACTGAAATTAAGCTG 23 23528177 0.666945338 7 22 80 0.967741935 1.477121255 0.258064516 0.304347826 0.483870968 23 1 0 30 2R:23528160-23528199 8 25 1834 FBgn0261786 586.8166667 18.49 28.43 0.042602744 1.352082207 0.879352796 1 1 1 0.01 dme-miR-33-5p 7mer-A1 AATGCAA 2R 23544848 23544854 - 2R_23544848_23544854_- 0.782911824 0.782911824 0.782911824 0 wmd FBtr0113112|FBtr0072114 23544821|23544821 23545063|23545063 2R - 23544832 23544920 3'utr wmd FlyBase G25995.1 TATTCCAACGCTGAACTCTCTCATTGGCATTAAATGATAATCACAACACACAAAACTACATTGTGAAATGCAATAGAAATAAATAACTT 42 23544860 0.838011463 8 40 220 0.963636364 1.423245874 0.127272727 0.238095238 0.418181818 42 1 1 53 2R:23544832-23544920 7 wmd FBtr0113112|FBtr0072114 23544821|23544821 23545063|23545063 AATGCAA 7mer-A1 dme-miR-33-5p 2R - 23544832 23544921 3'utr wmd FlyBase G19673.1 ATATTCCAACGCTGAACTCTCTCATTGGCATTAAATGATAATCACAACACACAAAACTACATTGTGAAATGCAATAGAAATAAATAACTT 29 23544860 0.713735031 9 29 152 1 1.681241237 0.104166667 0.448275862 0.666666667 29 0 0 48 2R:23544832-23544921 7 21 1835 FBgn0034876 541.5 41.29666667 63.21666667 0.038781163 0.508515619 0.332190878 6 6 6 0.01 dme-miR-8-3p 7mer-m8 CAGTATT 2R 23598763 23598769 + 2R_23598763_23598769_+ 0.661615243 0.661615243 0.661615243 0 apt FBtr0072069|FBtr0072067|FBtr0332926|FBtr0072068|FBtr0072066|FBtr0072070 23598526|23598526|23598526|23598526|23598526|23598526 23599526|23599526|23599526|23599526|23599526|23599526 2R + 23598741 23598784 3'utr apt FlyBase G18592.1 AGACATTCCTGGCATTGTTGATCAGTATTTGAAAGCTAGAAGCG 10 23598761 0.725171402 4 10 98 1 1 0.5 0 0 10 0 0 10 2R:23598741-23598784 7 apt FBtr0072066|FBtr0072070|FBtr0332926|FBtr0072068|FBtr0072069|FBtr0072067 23598526|23598526|23598526|23598526|23598526|23598526 23599526|23599526|23599526|23599526|23599526|23599526 CAGTATT 7mer-m8 dme-miR-8-3p 2R + 23598749 23598775 3'utr apt FlyBase G14139.1 CTGGCATTGTTGATCAGTATTTGAAAG 8 23598762 0.730993826 2 6 60 0.75 0.954242509 0.083333333 0.5 0.666666667 8 3 0 9 2R:23598749-23598775 7 9 1836 FBgn0015903 402.1966667 17.62666667 27.31666667 0.022377112 0.510590015 0.329469189 2 1 1.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG 2R 23679333 23679339 + 2R_23679333_23679339_+ 0.70297214 0.70297214 0.70297214 0 Pde8 FBtr0344184|FBtr0344179|FBtr0344182|FBtr0344178|FBtr0344183|FBtr0344177|FBtr0344176 23678688|23678688|23678688|23678688|23678688|23678688|23678688 23680017|23680017|23680844|23680844|23680844|23680017|23680017 2R + 23679294 23679355 3'utr Pde8 FlyBase G18602.1 CACAGCATATTGACCAGATCATATGGCGTGCGCTCCACTGTACCTGGCAACGGTATAATGTA 163 23679332 0.968632819 5 158 876 0.97311828 2.257678575 0.123655914 0.128834356 0.23655914 163 5 0 181 2R:23679294-23679355 7 Pde8 FBtr0344182|FBtr0344178|FBtr0344183|FBtr0344176|FBtr0344177|FBtr0344184|FBtr0344179 23678688|23678688|23678688|23678688|23678688|23678688|23678688 23680844|23680844|23680844|23680017|23680017|23680017|23680017 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" 2R + 23679305 23679350 3'utr Pde8 FlyBase G14147.1 GACCAGATCATATGGCGTGCGCTCCACTGTACCTGGCAACGGTATA 102 23679332 0.806597499 4 99 550 0.967320261 2.170261715 0.124183007 0.401960784 0.60130719 102 5 0 148 2R:23679305-23679350 7 131 1837 FBgn0266377 2144.47 62.20666667 95.11333333 0.061087355 2.105883614 1.377304269 1 1 1 0.01 dme-miR-12-5p 6mer2-7 ATACTC 2R 23699399 23699404 - 2R_23699399_23699404_- 0.999999997 1 0.999999998 0 CG4091 FBtr0072097|FBtr0072096|FBtr0072098 23698947|23698947|23698947 23699964|23699964|23699964 2R - 23699375 23699423 3'utr CG4091 FlyBase G26028.1 ATTCGTGGTCTACTTTTTGATACTCCCAAACTCGCTGTGTGCACCCGCA 19 23699406 0.815683846 6 17 115 0.916666667 1.342422681 0.166666667 0.210526316 0.375 19 2 0 22 2R:23699375-23699423 6 CG4091 FBtr0072096|FBtr0072098|FBtr0072097 23698947|23698947|23698947 23699964|23699964|23699964 ATACTC 6mer2-7 dme-miR-12-5p 2R - 23699368 23699422 3'utr CG4091 FlyBase G19695.1 TTCGTGGTCTACTTTTTGATACTCCCAAACTCGCTGTGTGCACCCGCAAGTAACT 10 23699407 0.987895681 5 10 79 1 1.230448921 0.529411765 0.4 0.647058824 10 0 0 17 2R:23699368-23699422 6 12.5 1838 FBgn0034894 369.3166667 23.85666667 36.49333333 0.033846293 0.523962554 0.342528316 2 3 2.5 0.01 dme-miR-92b-3p 7mer-m1 TGCAATT 2R 23699934 23699940 - 2R_23699934_23699940_- 0.751229154 0.765586663 0.758407908 0.010152286 CG4091 FBtr0072097|FBtr0072096|FBtr0072098 23698947|23698947|23698947 23699964|23699964|23699964 2R - 23699906 23699952 3'utr CG4091 FlyBase G26031.1 AGCGAGCTGAGCTGCAATTGCGTGCTATGAACGAAAGGCTATATATC 6 23699935 0.972921211 5 6 37 1 0.77815125 0.333333333 0 0 6 0 0 6 2R:23699906-23699952 7 CG4091 FBtr0072096|FBtr0072098|FBtr0072097 23698947|23698947|23698947 23699964|23699964|23699964 TGCAATT 7mer-m1 dme-miR-92b-3p 2R - 23699906 23699953 3'utr CG4091 FlyBase G19698.1 AAGCGAGCTGAGCTGCAATTGCGTGCTATGAACGAAAGGCTATATATC 7 23699935 0.969706042 4 7 37 1 1.113943352 0.153846154 0.857142857 0.923076923 7 0 0 13 2R:23699906-23699953 7 5 1839 FBgn0034894 369.3166667 23.85666667 36.49333333 0.013538517 0.209585022 0.137011326 -5 -5 -5 0.01 dme-miR-33-5p 8mer-A1 CAATGCAA 2R 23735298 23735305 - 2R_23735298_23735305_- 0.634548758 0.634548749 0.634548753 7.07E-08 egl FBtr0114586|FBtr0343272 23734902|23734902 23735574|23735574 2R - 23735294 23735324 3'utr egl FlyBase G26042.1 AACAATCGACAAATCGTGGCAATGCAATCTT 7 23735309 0.680310251 3 6 36 0.875 0.84509804 0 0.142857143 0.25 7 1 0 7 2R:23735294-23735324 8 egl FBtr0114586|FBtr0343272 23734902|23734902 23735574|23735574 CAATGCAA 8mer-A1 dme-miR-33-5p 2R - 23735289 23735325 3'utr egl FlyBase G19706.1 TAACAATCGACAAATCGTGGCAATGCAATCTTACCGA 8 23735309 0.70124795 5 8 43 1 1.204119983 0 0.75 0.875 8 0 0 16 2R:23735289-23735325 8 7.5 1840 FBgn0000562 583.3166667 16.09333333 24.84 0.01285751 0.466031483 0.301932367 4 4 4 0.01 dme-miR-92b-3p 7mer-A1 TGCAATA 2R 23735449 23735455 - 2R_23735449_23735455_- 0.701833649 0.782911824 0.742372736 0.057330945 egl FBtr0114586|FBtr0343272 23734902|23734902 23735574|23735574 2R - 23735453 23735481 3'utr egl FlyBase G26043.1 TTGGGTCCCTCGACGCTTAACGACTTTGC 12 23735455 0.765068961 2 11 75 1 1.176091259 0.333333333 0.25 0.4 12 0 0 15 2R:23735453-23735481 2 egl FBtr0114586|FBtr0343272 23734902|23734902 23735574|23735574 TGCAATA 7mer-A1 dme-miR-92b-3p 2R - 23735434 23735495 3'utr egl FlyBase G19707.1 TGAGGGGCTTGGCCTTGGGTCCCTCGACGCTTAACGACTTTGCAATAACTTTCATACCAATT 11 23735455 0.978799473 4 10 69 1 1.230448921 0.588235294 0.545454545 0.705882353 11 0 0 17 2R:23735434-23735495 7 10 1841 FBgn0000562 583.3166667 16.09333333 24.84 0.017143347 0.621375311 0.40257649 0 0 0 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 2R 23806460 23806465 - 2R_23806460_23806465_- 1 1 1 0 Ssrp FBtr0072242 23806359 23806554 2R - 23806435 23806478 3'utr Ssrp FlyBase G26058.1 ATTCGCCTAGTTTAGTTAAGTGCTGCCTGTTGGATACAGACCCA 6 23806450 0.976469755 4 6 40 1 0.903089987 0.375 0.166666667 0.375 6 0 0 8 2R:23806435-23806478 6 Ssrp FBtr0072242 23806359 23806554 AGTTAA 6mer3-8 dme-miR-999-3p 2R - 23806435 23806476 3'utr Ssrp FlyBase G19715.1 TCGCCTAGTTTAGTTAAGTGCTGCCTGTTGGATACAGACCCA 7 23806450 0.764678727 4 7 60 1 0.954242509 0.444444444 0.285714286 0.444444444 7 0 0 9 2R:23806435-23806476 6 5.5 1842 FBgn0010278 2602.646667 127.1966667 195.99 0.002113233 0.043240127 0.028062656 -15 -15 -15 0.01 dme-miR-304-5p 6mer3-8 TGAGAT 2R 23811416 23811421 - 2R_23811416_23811421_- 1 1 1 0 Nxt1 FBtr0343270 23811319 23811686 2R - 23811371 23811506 3'utr Nxt1 FlyBase G26072.1 ACGCAAATTTCAGCAGACTTTCATCGTTACCGCCGAGAATGATAAATGGAAGGTCGTCTCCGATTGCTACCGAATGCAGGAGGTCTGAGATCCACACACTTGTATTTTAAGCTAAGCTAAAGTTCTTACGTCGTAA 17 23811405 0.973029836 10 17 101 1 1.361727836 0.173913043 0.235294118 0.434782609 17 0 0 23 2R:23811371-23811506 6 Nxt1 FBtr0343270 23811319 23811686 TGAGAT 6mer3-8 dme-miR-304-5p 2R - 23811370 23811435 3'utr Nxt1 FlyBase G19726.1 GAATGCAGGAGGTCTGAGATCCACACACTTGTATTTTAAGCTAAGCTAAAGTTCTTACGTCGTAAC 11 23811405 0.967848707 5 11 61 1 1.255272505 0.611111111 0.272727273 0.555555556 11 0 0 18 2R:23811370-23811435 6 5 1843 FBgn0028411 120.6666667 31.62 48.83333333 0.041436464 0.158127767 0.102389078 -16 -16 -16 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2R 23812252 23812257 - 2R_23812252_23812257_- 1 1 1 0 CG4797 FBtr0072239|FBtr0072239|FBtr0072239 23812183|23812183|23812183 23812425|23812425|23812425 2R - 23812233 23812281 3'utr CG4797 FlyBase G26074.1 AAATGTTAGGTTACCAATTCAAATTGTGATCGCTATGCTTTAAATTGTG 76 23812258 0.781653802 9 75 656 0.975903614 1.908485019 0.108433735 0.092105263 0.168674699 76 2 0 81 2R:23812233-23812281 6 CG4797 FBtr0072239|FBtr0072239|FBtr0072239 23812183|23812183|23812183 23812425|23812425|23812425 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 23812236 23812281 3'utr CG4797 FlyBase G19729.1 AAATGTTAGGTTACCAATTCAAATTGTGATCGCTATGCTTTAAATT 54 23812258 0.759231431 8 52 467 0.977777778 1.467361417 0.2 0.462962963 0.677777778 54 0 2 88 2R:23812236-23812281 6 65 1844 FBgn0034909 31.51666667 1.766666667 2.636666667 2.062400846 36.79245283 24.65233881 1 1 1 0.01 dme-miR-276a-3p 6mer3-8 AGTTCC 2R 23841612 23841617 - 2R_23841612_23841617_- 1 1 1 0 shu FBtr0072237 23841459 23841694 2R - 23841528 23841669 3'utr shu FlyBase G26083.1 ATATTTCATATCTTACTCAAAAAAAAAAACATACCAAACATGAAGGTAATTTAGTTCCAAGTTCTAGAAGAGCAGTATCATTAGTTATTTCGATATTAGCAACATGAATATCGTAAGCCCAGACGAATGTTAACGTTTTTTG 171 23841619 0.983912788 14 166 1308 0.974226804 1.975431809 0.128865979 0.116959064 0.221649485 171 4 1 189 2R:23841528-23841669 6 shu FBtr0072237 23841459 23841694 AGTTCC 6mer3-8 dme-miR-276a-3p 2R - 23841592 23841651 3'utr shu FlyBase G19735.1 AAAAAAAAAAACATACCAAACATGAAGGTAATTTAGTTCCAAGTTCTAGAAGAGCAGTAT 102 23841619 0.986593798 7 91 743 0.920529801 2.1430148 0.185430464 0.392156863 0.589403974 102 12 0 139 2R:23841592-23841651 6 113.5 1845 FBgn0003401 190.3333333 13.83333333 21.23 0.596322242 8.204819277 5.346208196 2 2 2 0.01 dme-miR-317-3p 8mer-A1 TGTGTTCA 2R 23846904 23846911 + 2R_23846904_23846911_+ 0.631136783 0.631136783 0.631136783 0 CG5554 FBtr0343273|FBtr0072126 23846588|23846588 23847024|23847024 2R + 23846848 23846924 3'utr CG5554 FlyBase G18643.1 AACTAAATGTAACTTTAGTCGTATATTTTTACCTTTTGCCAAGCATTTTTGTATTTTGTGTTCAACTTGGTTTCCAC 46 23846903 0.993718318 9 45 576 0.966666667 1.763427994 0.15 0.239130435 0.416666667 46 2 0 58 2R:23846848-23846924 8 CG5554 FBtr0343273|FBtr0072126 23846588|23846588 23847024|23847024 TGTGTTCA 8mer-A1 dme-miR-317-3p 2R + 23846864 23846925 3'utr CG5554 FlyBase G14184.1 AGTCGTATATTTTTACCTTTTGCCAAGCATTTTTGTATTTTGTGTTCAACTTGGTTTCCACA 31 23846903 0.711980043 6 30 344 0.973684211 1.568201724 0.236842105 0.193548387 0.342105263 31 1 0 37 2R:23846864-23846925 8 33 1846 FBgn0034914 870.3333333 68.06 104.0466667 0.037916507 0.484866294 0.317165375 1 1 1 0.01 dme-miR-965-3p 7mer-m8 TACGCTT 2R 23848341 23848347 - 2R_23848341_23848347_- 0.620204855 0.620204855 0.620204855 0 ytr FBtr0343278|FBtr0072234 23847159|23847159 23848456|23848456 2R - 23848292 23848393 3'utr ytr FlyBase G26096.1 CGCCATCGCAGCAGCCACATCCTTTTCCGTTGCCCAACTAGTTTGCTACGCTTTTTTACTTGTCCGTGCCCAATGGGCAATGGGCGGCGGACGAAGACCTGC 53 23848340 0.984032123 9 51 402 0.939393939 1.190331698 0.060606061 0.20754717 0.363636364 53 1 3 62 2R:23848292-23848393 7 ytr FBtr0343278|FBtr0072234 23847159|23847159 23848456|23848456 TACGCTT 7mer-m8 dme-miR-965-3p 2R - 23848336 23848386 3'utr ytr FlyBase G19741.2 GCAGCAGCCACATCCTTTTCCGTTGCCCAACTAGTTTGCTACGCTTTTTTA 18 23848339 0.933267857 9 17 168 0.96 1.079181246 0.04 0.222222222 0.44 18 0 1 24 2R:23848336-23848386 7 19.5 1847 FBgn0021895 420.7166667 24.65 37.71666667 0.046349483 0.791075051 0.517012815 -7 -8 -7.5 0.01 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 2R 23866617 23866623 + 2R_23866617_23866623_+ 0.620204031 0.620204031 0.620204031 0 CG5569 FBtr0072128 23866579 23866654 2R + 23866593 23866641 3'utr CG5569 FlyBase G18658.1 ACATCTAATGATTGTTTGAAAGGCTGGTGCTCTGTTAGAAATTAAACTG 27 23866618 0.753833411 8 26 220 0.965517241 1.146128036 0.172413793 0.074074074 0.137931034 27 0 1 28 2R:23866593-23866641 7 CG5569 FBtr0072128 23866579 23866654 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 2R + 23866598 23866641 3'utr CG5569 FlyBase G14196.1 TAATGATTGTTTGAAAGGCTGGTGCTCTGTTAGAAATTAAACTG 19 23866620 0.681212384 6 17 144 0.931034483 1.130333768 0.137931034 0.421052632 0.620689655 19 1 1 27 2R:23866598-23866641 7 23 1848 FBgn0034919 94.64666667 15.64666667 23.91333333 0.243009086 1.469961653 0.961806524 -1 -3 -2 0.01 dme-miR-1006-3p 6mer2-7 GAATTT 2R 23876883 23876888 + 2R_23876883_23876888_+ 1 1 1 0 ken FBtr0072129 23876776 23877442 2R + 23876657 23876928 stop_codon ken FlyBase G18667.1 TACGGAGAACCGGTACAGCTGCTGCTTCTGCTCCATGTGCTTCGAGTCGGTACAGGAGCTCGTCCGTCACCTGTCCGGCCACCACAATAACCTGCTGCTGACAAAGAATCTGCGCGAATAGTGTCCCGGGCATCGGCAACCGCATAATCCGAGAGTATCCCATCTGTCCGATCCGATCCAAGTCGATCCGAGGTGATTCGCCGGACGGACAATTGCAAAGAGACCTGAATTTTAAATAGTAGCAGTAGCAGATTTAATTGCCTATTGTATAA 284 23876886 0.891365903 38 264 1475 0.92816092 1.554960013 0.16954023 0.183098592 0.333333333 284 17 8 323 2R:23876657-23876928 6 ken FBtr0072129 23876776 23877442 GAATTT 6mer2-7 dme-miR-1006-3p 2R + 23876658 23876907 stop_codon ken FlyBase G14206.1 ACGGAGAACCGGTACAGCTGCTGCTTCTGCTCCATGTGCTTCGAGTCGGTACAGGAGCTCGTCCGTCACCTGTCCGGCCACCACAATAACCTGCTGCTGACAAAGAATCTGCGCGAATAGTGTCCCGGGCATCGGCAACCGCATAATCCGAGAGTATCCCATCTGTCCGATCCGATCCAAGTCGATCCGAGGTGATTCGCCGGACGGACAATTGCAAAGAGACCTGAATTTTAAATAGTAGCAGTAGCAG 246 23876886 0.96674328 34 225 1214 0.926229508 1.831229694 0.144808743 0.345528455 0.56010929 246 23 4 339 2R:23876658-23876907 6 145 1849 FBgn0011236 845.1733333 33.37333333 51.22333333 0.171562441 4.344786256 2.830741199 -3 -3 -3 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2R 23877307 23877312 + 2R_23877307_23877312_+ 1 1 1 0 ken FBtr0072129 23876776 23877442 2R + 23877234 23877339 3'utr ken FlyBase G18671.1 TGTCTATACGAGAGGTATTTTAATTGCTATTGTATTTCCAACTCGTCTAGCATGAACTTCATGGCCCAAACTTGTACCTATATCTACATTTTTGATAGTTTTGATA 222 23877306 0.980806451 16 213 1585 0.969465649 2.103803721 0.022900763 0.153153153 0.282442748 222 7 1 254 2R:23877234-23877339 6 ken FBtr0072129 23876776 23877442 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2R + 23877257 23877337 3'utr ken FlyBase G14210.1 TTGCTATTGTATTTCCAACTCGTCTAGCATGAACTTCATGGCCCAAACTTGTACCTATATCTACATTTTTGATAGTTTTGA 138 23877306 0.787548952 10 134 931 1 2.334453751 0.046296296 0.427536232 0.634259259 138 0 0 216 2R:23877257-23877337 6 161.5 1850 FBgn0011236 845.1733333 33.37333333 51.22333333 0.191085063 4.839192968 3.152860025 1 1 1 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2R 23896706 23896711 + 2R_23896706_23896711_+ 1 1 1 0 CG17658 FBtr0072133 23896698 23896997 2R + 23896689 23896726 stop_codon CG17658 FlyBase G18679.1 AATGCCAATGACTACCAAAGACTATATAAGGCTTAGTT 6 23896713 0.893689285 3 6 26 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2R:23896689-23896726 6 CG17658 FBtr0072133 23896698 23896997 AAGACT 6mer3-8 dme-miR-14-3p 2R + 23896678 23896713 stop_codon CG17658 FlyBase G14215.1 AAGCAAAAAAAAATGCCAATGACTACCAAAGACTAT 5 23896701 0.888260236 2 5 15 1 0.954242509 0 0.6 0.777777778 5 0 0 9 2R:23896678-23896713 6 5 1851 FBgn0034924 26.68 1.76 2.723333333 0.187406297 2.840909091 1.835985312 -7 5 -1 0.01 dme-miR-34-5p 7mer-A1 ACTGCCA 2R 23896809 23896815 + 2R_23896809_23896815_+ 0.823349562 0.823349562 0.823349562 0 CG17658 FBtr0072133 23896698 23896997 2R + 23896789 23896827 3'utr CG17658 FlyBase G18680.1 ATATTCTAAGTTACCTGATTACTGCCACAAGTATCAAGT 7 23896807 0.972159745 2 7 47 1 1.176091259 0.333333333 0.571428571 0.8 7 0 0 15 2R:23896789-23896827 7 CG17658 FBtr0072133 23896698 23896997 ACTGCCA 7mer-A1 dme-miR-34-5p 2R + 23896789 23896861 3'utr CG17658 FlyBase G14216.1 ATATTCTAAGTTACCTGATTACTGCCACAAGTATCAAGTTAGATGCATTAAAACTACCCAAGACTGTAGAATA 10 23896807 0.857858643 4 10 58 1 1.255272505 0.111111111 0.5 0.722222222 10 0 0 18 2R:23896789-23896861 7 6 1852 FBgn0034924 26.68 1.76 2.723333333 0.224887556 3.409090909 2.203182375 2 2 2 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 23896961 23896966 - 2R_23896961_23896966_- 1 1 1 0 CG5339 FBtr0072220 23896894 23897117 2R - 23896930 23896983 3'utr CG5339 FlyBase G26145.1 TTTATTCTTAAAGAATTACCAAAAATGTAAATGGATAAACAAACATGTTTAAAT 11 23896967 0.985968869 2 9 77 0.846153846 1.041392685 0 0.181818182 0.307692308 11 2 0 11 2R:23896930-23896983 6 CG5339 FBtr0072220 23896894 23897117 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 23896940 23896974 3'utr CG5339 FlyBase G19772.1 AAAGAATTACCAAAAATGTAAATGGATAAACAAAC 5 23896967 0.614491343 3 4 22 1 0.903089987 0 0.4 0.625 5 0 0 8 2R:23896940-23896974 6 7.5 1853 FBgn0034925 184.9866667 18.32333333 27.93333333 0.040543463 0.409314171 0.26849642 1 1 1 0.01 dme-miR-277-3p 7mer-A1 GCATTTA 2R 23897022 23897028 - 2R_23897022_23897028_- 0.823349562 0.823349534 0.823349548 7.07E-08 CG5339 FBtr0072220 23896894 23897117 2R - 23896994 23897098 3'utr CG5339 FlyBase G26146.1 AAAAAGAACCCTTCTGAAGTTATTGTAACCGTTTTCCTCGTAGAGTTAAGTGGCTGCATTGAGAAACTGAGCATTTATACTTATTACAAATGTAGGCTATCAACT 30 23897031 0.957571383 15 29 229 0.96969697 1.505149978 0.242424242 0.1 0.181818182 30 1 0 32 2R:23896994-23897098 7 CG5339 FBtr0072220 23896894 23897117 GCATTTA 7mer-A1 dme-miR-277-3p 2R - 23896996 23897098 3'utr CG5339 FlyBase G19773.1 AAAAAGAACCCTTCTGAAGTTATTGTAACCGTTTTCCTCGTAGAGTTAAGTGGCTGCATTGAGAAACTGAGCATTTATACTTATTACAAATGTAGGCTATCAA 14 23897031 0.978847474 9 14 97 1 1.301029996 0.1 0.285714286 0.5 14 0 0 20 2R:23896996-23897098 7 10.5 1854 FBgn0034925 184.9866667 18.32333333 27.93333333 0.056760848 0.57303984 0.375894988 3 3 3 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 2R 23928916 23928921 - 2R_23928916_23928921_- 1 1 1 0 Ca-P60A FBtr0072216 23927480 23929230 2R - 23928902 23928945 3'utr Ca-P60A FlyBase G26166.1 CGTATACCCTACCCTATAGATATCTGTGTTTGTATATTACTATA 17 23928923 0.780194526 7 15 169 0.916666667 1.342422681 0.041666667 0.411764706 0.583333333 17 2 0 22 2R:23928902-23928945 6 Ca-P60A FBtr0072216 23927480 23929230 TGTGTT 6mer3-8 dme-miR-317-3p 2R - 23928906 23928945 3'utr Ca-P60A FlyBase G19788.2 CGTATACCCTACCCTATAGATATCTGTGTTTGTATATTAC 12 23928915 0.680136648 5 9 110 0.833333333 1.176091259 0 0.333333333 0.555555556 12 3 0 15 2R:23928906-23928945 6 12.5 1855 FBgn0263006 3996.03 108.55 166.07 0.003128105 0.115154307 0.075269465 2 -6 -2 0.01 dme-bantam-3p 6mer3-8 TGATCT 2R 23937288 23937293 - 2R_23937288_23937293_- 1 1 1 0 CG3735 FBtr0343280 23937075 23937467 2R - 23937276 23937317 3'utr CG3735 FlyBase G26189.1 TTTAGGAGGAACTGGCTAGGTGATTGATCTGATGTTAAGGGT 8 23937297 0.865217589 5 8 59 1 0.903089987 0.125 0 0 8 0 0 8 2R:23937276-23937317 6 CG3735 FBtr0343280 23937075 23937467 TGATCT 6mer3-8 dme-bantam-3p 2R - 23937275 23937319 3'utr CG3735 FlyBase G19804.1 ATTTTAGGAGGAACTGGCTAGGTGATTGATCTGATGTTAAGGGTG 17 23937294 0.726474016 5 16 121 1 1.414973348 0.230769231 0.294117647 0.538461538 17 0 0 26 2R:23937275-23937319 6 12 1856 FBgn0034933 271.7233333 14.71 22.62666667 0.044162567 0.815771584 0.530347672 4 1 2.5 0.01 dme-miR-190-5p 6mer3-8 ACATAT 2R 23937430 23937435 - 2R_23937430_23937435_- 1 1 1 0 CG3735 FBtr0343280 23937075 23937467 2R - 23937425 23937467 3'utr CG3735 FlyBase G26190.1 ATGCTTACACGAGAGCTGACTTTGAAATATGTACATATTTAGT 15 23937445 0.890879564 2 15 82 1 1.322219295 0.333333333 0.266666667 0.476190476 15 0 0 21 2R:23937425-23937467 6 CG3735 FBtr0343280 23937075 23937467 ACATAT 6mer3-8 dme-miR-190-5p 2R - 23937422 23937473 stop_codon CG3735 FlyBase G19806.1 ACGTAAATGCTTACACGAGAGCTGACTTTGAAATATGTACATATTTAGTTGT 14 23937445 0.965429146 2 14 79 1 1.361727836 0 0.5 0.695652174 14 0 0 23 2R:23937422-23937473 6 2 1857 FBgn0034933 271.7233333 14.71 22.62666667 0.007360428 0.135961931 0.088391279 10 10 10 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 2R 23942064 23942069 + 2R_23942064_23942069_+ 1 1 1 0 Tal FBtr0072141 23942013 23942114 2R + 23942063 23942091 3'utr Tal FlyBase G18711.1 TGAAAAAGACAATGATTTTATACTTTAAT 6 23942076 0.975254404 4 6 37 1 0.77815125 0 0 0 6 0 0 6 2R:23942063-23942091 6 Tal FBtr0072141 23942013 23942114 GAAAAA 6mer3-8 dme-miR-980-5p 2R + 23942033 23942093 3'utr Tal FlyBase G14240.1 TAGCAGGTGGAGGATGAATACATTCGTTTTTGAAAAAGACAATGATTTTATACTTTAATAA 5 23942075 0.989014265 3 5 43 1 0.903089987 0 0.2 0.5 5 0 0 8 2R:23942033-23942093 6 4 1858 FBgn0023477 409 45.06666667 68.61 0.009779951 0.088757396 0.058300539 -12 -11 -11.5 0.01 dme-miR-33-5p 7mer-A1 AATGCAA 2R 23946765 23946771 + 2R_23946765_23946771_+ 0.782911824 0.782911824 0.782911824 0 Galphas FBtr0072142|FBtr0343279|FBtr0072143|FBtr0072144|FBtr0301411 23946746|23946746|23946746|23946746|23946746 23946936|23946936|23946936|23946936|23946936 2R + 23946691 23946809 stop_codon Galphas FlyBase G18722.1 AATGATTGCAGAGACATTATTCAAAGGATGCACCTTCGTCAATATGAATTGTTATAGGTTATCCCCATCGCCGTAATGCAAGTAAATAAAAATATTAATGACTTACTGTTTTAAATATA 21 23946785 0.985666685 13 18 151 0.909090909 1.301029996 0.181818182 0.047619048 0.090909091 21 2 0 20 2R:23946691-23946809 7 Galphas FBtr0072144|FBtr0072143|FBtr0343279|FBtr0072142|FBtr0301411 23946746|23946746|23946746|23946746|23946746 23946936|23946936|23946936|23946936|23946936 AATGCAA 7mer-A1 dme-miR-33-5p 2R + 23946696 23946808 stop_codon Galphas FlyBase G14246.1 TTGCAGAGACATTATTCAAAGGATGCACCTTCGTCAATATGAATTGTTATAGGTTATCCCCATCGCCGTAATGCAAGTAAATAAAAATATTAATGACTTACTGTTTTAAATAT 13 23946764 0.973314139 7 13 84 1 1.301029996 0.1 0.384615385 0.6 13 0 0 20 2R:23946696-23946808 7 4 1859 FBgn0001123 1422.84 105.62 161.5433333 0.002811279 0.037871615 0.024761158 -20 1 -9.5 0.01 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 23946865 23946872 + 2R_23946865_23946872_+ 0.625364269 0.625364269 0.625364269 0 Galphas FBtr0072142|FBtr0343279|FBtr0072143|FBtr0072144|FBtr0301411 23946746|23946746|23946746|23946746|23946746 23946936|23946936|23946936|23946936|23946936 2R + 23946851 23946892 3'utr Galphas FlyBase G18723.1 AACAAAAAATTCGCTGCATTTAGATCTGGTATGACCTTTCAC 7 23946863 0.856928223 6 6 45 0.933333333 1.146128036 0.133333333 0.571428571 0.8 7 1 0 14 2R:23946851-23946892 8 Galphas FBtr0072144|FBtr0072143|FBtr0343279|FBtr0072142|FBtr0301411 23946746|23946746|23946746|23946746|23946746 23946936|23946936|23946936|23946936|23946936 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 23946854 23946881 3'utr Galphas FlyBase G14247.1 AAAAAATTCGCTGCATTTAGATCTGGTA 5 23946860 0.837023196 3 4 34 0.666666667 0.77815125 0 0.4 0.666666667 5 3 0 6 2R:23946854-23946881 8 5.5 1860 FBgn0001123 1422.84 105.62 161.5433333 0.003865508 0.052073471 0.034046592 2 5 3.5 0.01 dme-miR-14-3p 6mer2-7 AGACTG 2R 23985196 23985201 - 2R_23985196_23985201_- 1 1 1 0 Phm FBtr0072203 23985173 23985526 2R - 23985134 23985221 3'utr Phm FlyBase G26210.3 ATTCCACTACGCAGTAAATGAGACTGCTCCGACGTAAATATTTTCAATGCAAAGCATTTATTCTCGCGTTTTTTGTATGTATATAGAA 90 23985203 0.960679406 9 88 382 0.979591837 1.982271233 0.163265306 0.077777778 0.153061224 90 2 0 96 2R:23985134-23985221 6 Phm FBtr0072203 23985173 23985526 AGACTG 6mer2-7 dme-miR-14-3p 2R - 23985149 23985220 3'utr Phm FlyBase G19823.1 TTCCACTACGCAGTAAATGAGACTGCTCCGACGTAAATATTTTCAATGCAAAGCATTTATTCTCGCGTTTTT 50 23985203 0.941227515 8 49 198 0.986842105 1.574031268 0.171052632 0.42 0.618421053 50 0 1 75 2R:23985149-23985220 6 65 1861 FBgn0019948 999.0666667 82.65666667 126.22 0.065060723 0.78638545 0.514973855 2 2 2 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 2R 24020022 24020027 - 2R_24020022_24020027_- 1 0.999999997 0.999999999 0 CG3907 FBtr0072195|FBtr0072196 24019896|24019896 24020237|24020237 2R - 24019974 24020109 3'utr CG3907 FlyBase G26229.1 GAAAACTGCAATGTACATATGGTTCGAAGAGCTATTTAACTTAATGACAATTTATAGGATGACGATGTGCACGTGTGATTTCAGTTAAGCAGTTAAGTTTAGAAAGAGTAAATGTACATATGGGGGGGGCGAAGTA 426 24020030 0.979985828 21 408 3226 0.958 1.777245526 0.354 0.143192488 0.27 426 14 7 479 2R:24019974-24020109 6 CG3907 FBtr0072195|FBtr0072196 24019896|24019896 24020237|24020237 AGTTAA 6mer3-8 dme-miR-999-3p 2R - 24019923 24020128 3'utr CG3907 FlyBase G19835.1 AATTACATTTATTGCACACGAAAACTGCAATGTACATATGGTTCGAAGAGCTATTTAACTTAATGACAATTTATAGGATGACGATGTGCACGTGTGATTTCAGTTAAGCAGTTAAGTTTAGAAAGAGTAAATGTACATATGGGGGGGGCGAAGTAAGTGTAAGTCCAACATTATTCACTTTAGATACACGATATGTATTTTATTTG 350 24020030 0.982182462 23 344 2560 0.987084871 2.126293791 0.348708487 0.394285714 0.608856089 350 4 3 535 2R:24019923-24020128 6 267 1862 FBgn0034958 1493.146667 107.1866667 164.3533333 0.178816995 2.490981465 1.624548736 3 3 3 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 24020208 24020213 - 2R_24020208_24020213_- 1 1 1 0 CG3907 FBtr0072195|FBtr0072196 24019896|24019896 24020237|24020237 2R - 24020149 24020323 lincRNA_intron-lincRNA_exon CG3907 FlyBase G26230.1 AGCCCGAAGCGATTGCCGTCAAGCAGGAAGTCATAAAGCCGTCTGCAAATGCTACAGTGAAGCTTCAGGAATCCTTGAAGCTGTAAGCTGCTGCATTGCTGCGTTGTATTACCAAATTTGTTCGATTCCGTATTTAGCCATTAAGACCTCATGGATTCCATGTGTCCGAGTTACA 83 24020198 0.881809046 27 78 648 0.951923077 1.995635195 0.201923077 0.192771084 0.355769231 83 5 0 99 2R:24020149-24020323 6 CG3907 FBtr0072195|FBtr0072196 24019896|24019896 24020237|24020237 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 24020142 24020252 stop_codon CG3907 FlyBase G19836.1 TCCTTGAAGCTGTAAGCTGCTGCATTGCTGCGTTGTATTACCAAATTTGTTCGATTCCGTATTTAGCCATTAAGACCTCATGGATTCCATGTGTCCGAGTTACAGCCAACG 48 24020206 0.931047451 19 45 409 0.972222222 1.84509804 0.277777778 0.291666667 0.527777778 48 2 0 70 2R:24020142-24020252 6 27.5 1863 FBgn0034958 1493.146667 107.1866667 164.3533333 0.018417481 0.256561761 0.167322435 -15 -7 -11 0.01 dme-miR-79-3p 6mer2-7 AGCTTT 2R 24027986 24027991 - 2R_24027986_24027991_- 1 1 1 0 HSPC300 FBtr0343346 24027715 24028014 2R - 24027910 24028022 stop_codon HSPC300 FlyBase G26240.1 TAACGTAAACGCTGCCCACAACCTTATACTAAGCTTTGTACATTTATAAGTAATTAAAATACTGATTTAATATTTAATATCTTTTGATTCGCAATGTGAATTGCCGTGACATT 19 24027994 0.814564407 13 18 160 0.956521739 1.041392685 0.086956522 0.157894737 0.304347826 19 0 1 22 2R:24027910-24028022 6 HSPC300 FBtr0343346 24027715 24028014 AGCTTT 6mer2-7 dme-miR-79-3p 2R - 24027934 24028013 NoAnnotation G19842.1 CGCTGCCCACAACCTTATACTAAGCTTTGTACATTTATAAGTAATTAAAATACTGATTTAATATTTAATATCTTTTGATT 8 24027997 0.993936641 4 5 68 0.777777778 0.84509804 0.222222222 0.125 0.222222222 8 2 0 7 2R:24027934-24028013 6 5.5 1864 FBgn0061198 194.6666667 73.75 112.1833333 0.028253425 0.074576271 0.049026891 3 6 4.5 0.01 dme-miR-305-5p 7mer-m1 GTACAAT 2R 24044373 24044379 + 2R_24044373_24044379_+ 0.765586663 0.765586663 0.765586663 0 IntS1 FBtr0072168 24044337 24044458 2R + 24044344 24044384 3'utr IntS1 FlyBase G18814.2 CGGTCTATAAGTTAGAACCGTCATCATATGTACAATGTAAT 10 24044369 0.597909211 5 9 57 1 1.113943352 0.153846154 0.3 0.461538462 10 0 0 13 2R:24044344-24044384 7 IntS1 FBtr0072168 24044337 24044458 GTACAAT 7mer-m1 dme-miR-305-5p 2R + 24044353 24044384 3'utr IntS1 FlyBase G14309.1 AGTTAGAACCGTCATCATATGTACAATGTAAT 8 24044368 0.640308137 3 8 54 1 1.041392685 0.090909091 0.25 0.454545455 8 0 0 11 2R:24044353-24044384 7 8 1865 FBgn0034964 864.9966667 16.29666667 25.03666667 0.009248591 0.490897934 0.319531354 4 5 4.5 0.01 dme-miR-282-5p 7mer-A1 GAGGCTA 2R 24052999 24053005 + 2R_24052999_24053005_+ 0.823349562 0.823349562 0.823349562 0 sei FBtr0343342|FBtr0072169|FBtr0072170 24052939|24052939|24052939 24053035|24053035|24053035 2R + 24052982 24053014 3'utr sei FlyBase G18820.1 TGTGCACAAGCTGTTGCGAGGCTAAAGAGCGAA 21 24052996 0.707925865 2 21 71 1 1.361727836 0.304347826 0.047619048 0.130434783 21 0 0 23 2R:24052982-24053014 7 sei FBtr0072170|FBtr0343342|FBtr0072169 24052939|24052939|24052939 24053035|24053035|24053035 GAGGCTA 7mer-A1 dme-miR-282-5p 2R + 24052982 24053015 3'utr sei FlyBase G14312.1 TGTGCACAAGCTGTTGCGAGGCTAAAGAGCGAAA 17 24052996 0.721416372 2 17 62 1 1.380211242 0.666666667 0.411764706 0.583333333 17 0 0 24 2R:24052982-24053015 7 19 1866 FBgn0003353 165.25 6.316666667 9.546666667 0.114977307 3.007915567 1.990223464 3 3 3 0.01 dme-bantam-3p 8mer-A1 TGATCTCA 2R 24089378 24089385 + 2R_24089378_24089385_+ 0.631136385 0.631136385 0.631136385 0 snama FBtr0307174 24089270 24089512 2R + 24089309 24089420 3'utr snama FlyBase G18849.1 GATCGAGTCAAGTGTCGAGGCCACTGGAACTCCGAGGTGTTGACGAGTCCATACGCAGCCGGTCCTGCCTGATCTCAATATTTTTAAGTTCCAACAGAGACTATACACACAC 48 24089376 0.982996232 13 45 341 0.927272727 1.40654018 0.054545455 0.145833333 0.254545455 48 3 1 51 2R:24089309-24089420 8 snama FBtr0307174 24089270 24089512 TGATCTCA 8mer-A1 dme-bantam-3p 2R + 24089337 24089420 3'utr snama FlyBase G14345.1 ACTCCGAGGTGTTGACGAGTCCATACGCAGCCGGTCCTGCCTGATCTCAATATTTTTAAGTTCCAACAGAGACTATACACACAC 27 24089377 0.987153797 7 23 201 0.844444444 1.579783597 0 0.481481481 0.688888889 27 7 0 38 2R:24089337-24089420 8 27.5 1867 FBgn0086129 1271.946667 47.64 73.46 0.021620403 0.577246012 0.37435339 2 1 1.5 0.01 dme-miR-986-5p 6mer3-8 ATTCGA 2R 24107224 24107229 - 2R_24107224_24107229_- 1 1 1 0 CG4049 FBtr0072285 24107085 24107905 2R - 24107196 24107254 3'utr CG4049 FlyBase G26295.1 AATAGAAAAACTCATACGGAATAACATTCGAAGATTGGTCTCTTTTTGTTAAGGGCAGC 119 24107220 0.857736199 8 117 1135 0.985815603 1.841984805 0.092198582 0.159663866 0.290780142 119 1 1 139 2R:24107196-24107254 6 CG4049 FBtr0072285 24107085 24107905 ATTCGA 6mer3-8 dme-miR-986-5p 2R - 24107196 24107239 3'utr CG4049 FlyBase G19886.1 ACGGAATAACATTCGAAGATTGGTCTCTTTTTGTTAAGGGCAGC 59 24107220 0.838692198 4 56 565 0.977777778 1.944482672 0.011111111 0.322033898 0.555555556 59 2 0 88 2R:24107196-24107239 6 86.5 1868 FBgn0034976 380.64 7.436666667 11.32 0.227248844 11.63155536 7.641342756 -9 -9 -9 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 24127704 24127710 - 2R_24127704_24127710_- 0.661615511 0.661615511 0.661615511 0 tamo FBtr0072282|FBtr0072281|FBtr0343438 24126636|24126636|24127142 24127812|24127812|24127812 2R - 24127677 24127745 3'utr tamo FlyBase G26309.1 ACGACCAATGTAAGCCTGTGCGCGTGTCTCTAAGATCTAGTCTCGATCGAAGTCGTCGTTCGATGGCAG 22 24127710 0.674359391 9 19 141 0.870967742 1.431363764 0.290322581 0.363636364 0.548387097 22 4 0 27 2R:24127677-24127745 7 tamo FBtr0072282|FBtr0072281|FBtr0343438 24126636|24126636|24127142 24127812|24127812|24127812 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R - 24127655 24127745 3'utr tamo FlyBase G19899.1 ACGACCAATGTAAGCCTGTGCGCGTGTCTCTAAGATCTAGTCTCGATCGAAGTCGTCGTTCGATGGCAGGCAGCCCTTTGTCATCCGCATT 14 24127710 0.877752855 8 12 103 0.888888889 0.903089987 0.333333333 0.142857143 0.333333333 14 1 1 16 2R:24127655-24127745 7 8.5 1869 FBgn0041582 428.8966667 12.44 19.01333333 0.019818293 0.683279743 0.447054698 0 0 0 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT 2R 24177180 24177185 + 2R_24177180_24177185_+ 1 1 1 0 Nop60B FBtr0300861|FBtr0100213|FBtr0300227 24177104|24177104|24177104 24186343|24186343|24186343 2R + 24177104 24177279 stop_codon Nop60B FlyBase G18885.1 AGGAATCAGAAGTTTCTATAGGATTAGGTTTTAAAGAGAATTCTACGCTTTTTTGTAGAGGCACCTACCGATTGCTAGCTGTTAGGTTTAAGGAGTGTTTTTATGTGTAGAAGTGCATACAAATTACAAATGCATTTAAGTGACATTCGCAATGCAATAAATTGAACATTTTATTG 380 24177176 0.832317126 39 351 3036 0.917410714 1.437750563 0.303571429 0.157894737 0.285714286 380 23 14 411 2R:24177104-24177279 6 Nop60B FBtr0300227|FBtr0300861|FBtr0100213 24177104|24177104|24177104 24186343|24186343|24186343 AGCTGT 6mer3-8 dme-miR-1008-3p 2R + 24177090 24177270 stop_codon Nop60B FlyBase G14369.1 CGAAGCTCAGGAATAGGAATCAGAAGTTTCTATAGGATTAGGTTTTAAAGAGAATTCTACGCTTTTTTGTAGAGGCACCTACCGATTGCTAGCTGTTAGGTTTAAGGAGTGTTTTTATGTGTAGAAGTGCATACAAATTACAAATGCATTTAAGTGACATTCGCAATGCAATAAATTGAAC 207 24177176 0.987847291 32 182 1632 0.898360656 1.358569317 0.275409836 0.347826087 0.557377049 207 20 11 274 2R:24177090-24177270 6 146.5 1870 FBgn0259937 3319.8 215.61 334.3133333 0.044129164 0.679467557 0.438211658 4 4 4 0.01 dme-miR-92b-3p 7mer-A1 TGCAATA 2R 24185495 24185501 + 2R_24185495_24185501_+ 0.782911824 0.782911824 0.782911824 0 Nop60B FBtr0300861|FBtr0100213|FBtr0300227 24177104|24177104|24177104 24186343|24186343|24186343 2R + 24185494 24185524 5'utr Nop60B FlyBase G18886.1 ATGCAATATATGGACTATAACTTTAATAAAA 42 24185504 0.827926661 2 40 321 0.963636364 1.423245874 0 0.214285714 0.4 42 1 1 53 2R:24185494-24185524 7 Nop60B FBtr0300227|FBtr0300861|FBtr0100213 24177104|24177104|24177104 24186343|24186343|24186343 TGCAATA 7mer-A1 dme-miR-92b-3p 2R + 24185494 24185524 5'utr Nop60B FlyBase G14370.1 ATGCAATATATGGACTATAACTTTAATAAAA 43 24185504 0.79304305 5 42 311 0.984126984 1.792391689 0 0.372093023 0.571428571 43 1 0 62 2R:24185494-24185524 7 41.5 1871 FBgn0259937 3319.8 215.61 334.3133333 0.012500753 0.192477158 0.124135043 -9 -9 -9 0.01 dme-miR-283-5p 7mer-m1 GATATTT 2R 24264452 24264458 + 2R_24264452_24264458_+ 0.765586663 0.765586663 0.765586663 0 CG3376 FBtr0072265 24264348 24265213 2R + 24264363 24264493 3'utr CG3376 FlyBase G18960.1 CAAGTTCGTGTTTCTATGGTGTAGGTGGCTCACACAAACTAATGCAACTCGAGTTGTAATTGTAATCAATCACATATTTTAAGCCATTAGATATTTAAAGCTATTTGATCGTCATTTCGCATTCTCAAAAC 86 24264468 0.716275619 20 83 723 0.981818182 1.556302501 0.072727273 0.209302326 0.381818182 86 0 2 108 2R:24264363-24264493 7 CG3376 FBtr0072265 24264348 24265213 GATATTT 7mer-m1 dme-miR-283-5p 2R + 24264446 24264494 3'utr CG3376 FlyBase G14424.1 CCATTAGATATTTAAAGCTATTTGATCGTCATTTCGCATTCTCAAAACA 50 24264467 0.707326845 9 48 450 0.953846154 1.792391689 0.015384615 0.2 0.384615385 50 3 0 62 2R:24264446-24264494 7 25.5 1872 FBgn0034997 1791.34 62.30666667 94.61 0.014235154 0.409265996 0.269527534 -16 -15 -15.5 0.01 dme-miR-33-5p 8mer-A1 CAATGCAA 2R 24264882 24264889 + 2R_24264882_24264889_+ 0.634552243 0.634552243 0.634552243 0 CG3376 FBtr0072265 24264348 24265213 2R + 24264853 24265208 3'utr CG3376 FlyBase G18961.4 TGGTCGTTTGAGGTCATCCAACTGCAAGTCAATGCAATCGCAACGAAGGAAAACTCCTACCCCATAAGCTTACTATGTGATAACTAGTGCTTAAAACCATTTCGCTTAGTGTACGTTAACGCAATGATGTCCCAAAACTGCCTGCTTTGAAACCTTACAATCGCCCTTCGGAATCTGAGTCAGTGAAGAATAGTCATTTATCTGTAATCGAGTCGATGCTGTTGCCCACTCCGCAGCATTTGCGGTCGTGGCATGTTGCGCGCTTTTACGCAATGGAAATTGTCGAGCAAATTACCTTCTAAGACACCTAATTGTAAAGCTAACCTAGGTCTTAACTTAAATAAAGTGCAATTATT 255 24264881 0.974749414 47 237 1375 0.920127796 1.857332496 0.309904153 0.192156863 0.341853035 255 22 3 288 2R:24264853-24265208 8 CG3376 FBtr0072265|FBtr0343442 24264348|24264838 24265213|24265213 CAATGCAA 8mer-A1 dme-miR-33-5p 2R + 24264851 24264963 3'utr CG3376 FlyBase G14427.2 GATGGTCGTTTGAGGTCATCCAACTGCAAGTCAATGCAATCGCAACGAAGGAAAACTCCTACCCCATAAGCTTACTATGTGATAACTAGTGCTTAAAACCATTTCGCTTAGTG 93 24264881 0.923431083 14 79 385 0.869565217 1.037788561 0.326086957 0.344086022 0.557971014 93 8 10 120 2R:24264851-24264963 8 70.5 1873 FBgn0034997 1791.34 62.30666667 94.61 0.039356013 1.131500107 0.745164359 1 1 1 0.01 dme-miR-1006-3p 8mer-A1 CGAATTTA 2R 24312766 24312773 + 2R_24312766_24312773_+ 0.671697512 0.671373026 0.671535269 0.000229456 betaTub60D FBtr0072270|FBtr0343443 24312146|24312146 24313099|24313099 2R + 24312675 24312853 3'utr betaTub60D FlyBase G18982.1 AACCCCAAGTTATCCCACGTCATTCTTATACTACTATTTATATCGCAACGTCAGCAGAAGGACCACAAGTATCTAGTATTGCAAAGGATATCGAATTTATGCAGAAATCTCAAAACGAGAATGTCCAGCGTCTAGGAAGTCGGCACTCAAGACTTGGCGGCACTTACGTTTAGGGCTAT 110 24312765 0.968301615 22 105 645 0.94488189 2.079181246 0.212598425 0.145454545 0.25984252 110 7 0 120 2R:24312675-24312853 8 betaTub60D FBtr0343443|FBtr0072270 24312146|24312146 24313099|24313099 CGAATTTA 8mer-A1 dme-miR-1006-3p 2R + 24312670 24312786 3'utr betaTub60D FlyBase G14446.1 TTCATAACCCCAAGTTATCCCACGTCATTCTTATACTACTATTTATATCGCAACGTCAGCAGAAGGACCACAAGTATCTAGTATTGCAAAGGATATCGAATTTATGCAGAAATCTCA 54 24312748 0.965927473 16 50 287 0.934065934 1.452297671 0.131868132 0.518518519 0.714285714 54 4 2 85 2R:24312670-24312786 8 27 1874 FBgn0003888 691.4333333 33.13333333 50.45333333 0.039049318 0.814889336 0.535147992 1 18 9.5 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2R 24312823 24312828 + 2R_24312823_24312828_+ 1 1 1 0 betaTub60D FBtr0072270|FBtr0343443 24312146|24312146 24313099|24313099 2R + 24312675 24312853 3'utr betaTub60D FlyBase G18982.1 AACCCCAAGTTATCCCACGTCATTCTTATACTACTATTTATATCGCAACGTCAGCAGAAGGACCACAAGTATCTAGTATTGCAAAGGATATCGAATTTATGCAGAAATCTCAAAACGAGAATGTCCAGCGTCTAGGAAGTCGGCACTCAAGACTTGGCGGCACTTACGTTTAGGGCTAT 110 24312838 0.968301615 22 105 645 0.94488189 2.079181246 0.212598425 0.145454545 0.25984252 110 7 0 120 2R:24312675-24312853 6 betaTub60D FBtr0343443|FBtr0072270 24312146|24312146 24313099|24313099 AAGACT 6mer3-8 dme-miR-14-3p 2R + 24312811 24312910 3'utr betaTub60D FlyBase G14447.1 AAGTCGGCACTCAAGACTTGGCGGCACTTACGTTTAGGGCTATACGATAAACGAGCTCATCCAAAGATAATCGAACGACAACTCTCATGAGATCCTCTAT 21 24312838 0.963971773 7 20 107 0.96875 1.491361694 0.15625 0.476190476 0.65625 21 1 0 31 2R:24312811-24312910 6 16 1875 FBgn0003888 691.4333333 33.13333333 50.45333333 0.023140336 0.482897384 0.317124736 -15 -15 -15 0.01 dme-miR-304-5p 6mer3-8 TGAGAT 2R 24312898 24312903 + 2R_24312898_24312903_+ 1 1 1 0 betaTub60D FBtr0072270|FBtr0343443 24312146|24312146 24313099|24313099 2R + 24312856 24312911 3'utr betaTub60D FlyBase G18983.1 GATAAACGAGCTCATCCAAAGATAATCGAACGACAACTCTCATGAGATCCTCTATA 12 24312898 0.844203346 4 9 47 0.8 1.079181246 0.2 0.166666667 0.333333333 12 3 0 12 2R:24312856-24312911 6 betaTub60D FBtr0343443|FBtr0072270 24312146|24312146 24313099|24313099 TGAGAT 6mer3-8 dme-miR-304-5p 2R + 24312811 24312910 3'utr betaTub60D FlyBase G14447.1 AAGTCGGCACTCAAGACTTGGCGGCACTTACGTTTAGGGCTATACGATAAACGAGCTCATCCAAAGATAATCGAACGACAACTCTCATGAGATCCTCTAT 21 24312898 0.963971773 7 20 107 0.96875 1.491361694 0.15625 0.476190476 0.65625 21 1 0 31 2R:24312811-24312910 6 5.5 1876 FBgn0003888 691.4333333 33.13333333 50.45333333 0.007954491 0.165995976 0.109011628 0 0 0 0.01 dme-miR-92b-3p 7mer-m1 TGCAATT 2R 24312935 24312941 + 2R_24312935_24312941_+ 0.765586663 0.765586663 0.765586663 0 betaTub60D FBtr0072270|FBtr0343443 24312146|24312146 24313099|24313099 2R + 24312926 24313070 3'utr betaTub60D FlyBase G18984.1 AAAAGCATCTGCAATTGTATTTACATAATCTTAGGGCACAATCTATTCACTTTGTATTCGTGTGCAGTACTTCTCTTGTAGTTTTATATGGATAAAAACATTTGTACCCAATAAATAACTAATAATAATGGCAAACATTTTTGAC 61 24312940 0.890466309 18 55 552 0.917808219 1.525044807 0.164383562 0.131147541 0.273972603 61 5 1 67 2R:24312926-24313070 7 betaTub60D FBtr0343443|FBtr0072270 24312146|24312146 24313099|24313099 TGCAATT 7mer-m1 dme-miR-92b-3p 2R + 24312927 24313059 3'utr betaTub60D FlyBase G14448.1 AAAGCATCTGCAATTGTATTTACATAATCTTAGGGCACAATCTATTCACTTTGTATTCGTGTGCAGTACTTCTCTTGTAGTTTTATATGGATAAAAACATTTGTACCCAATAAATAACTAATAATAATGGCAA 43 24312941 0.870051223 16 36 364 0.825396825 1.414973348 0.047619048 0.348837209 0.555555556 43 10 1 52 2R:24312927-24313059 7 19 1877 FBgn0003888 691.4333333 33.13333333 50.45333333 0.02747915 0.573440644 0.376585624 -5 -6 -5.5 0.01 dme-miR-980-3p 7mer-A1 GCAGCTA 2R 24392975 24392981 - 2R_24392975_24392981_- 0.823349562 0.823349562 0.823349562 0 slik FBtr0072366|FBtr0332925|FBtr0072364|FBtr0100470 24392127|24392127|24392127|24392821 24393053|24393053|24393053|24393053 2R - 24392891 24392999 3'utr slik FlyBase G26332.1 AAAGGAACTGCAGCGGCAGCAGCTATGACAGCTATGCAGAACGTAACAAAACAATTGTCAGCCATCCATTAAGGCTTCCGCCAGAGATTGAGCGCCTCTGCTTTGCTTA 52 24392974 0.866627364 11 51 214 0.964912281 1.740362689 0.210526316 0.076923077 0.157894737 52 2 0 55 2R:24392891-24392999 7 slik FBtr0332925|FBtr0072364|FBtr0100470|FBtr0072366 24392127|24392127|24392821|24392127 24393053|24393053|24393053|24393053 GCAGCTA 7mer-A1 dme-miR-980-3p 2R - 24392955 24392999 3'utr slik FlyBase G19917.1 AAAGGAACTGCAGCGGCAGCAGCTATGACAGCTATGCAGAACGTA 19 24392975 0.755108189 4 18 64 1 1.531478917 0.323529412 0.421052632 0.676470588 19 0 0 34 2R:24392955-24392999 7 28.5 1878 FBgn0035001 5352.49 110.13 168.49 0.005324625 0.258785072 0.169149504 -7 -6 -6.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2R 24394005 24394010 - 2R_24394005_24394010_- 1 1 1 0 slik FBtr0290019 24393676 24394246 2R - 24393988 24394036 3'utr slik FlyBase G26335.1 AATTTGTAAAGCTTTTCTCACCTAATTACCTGCAACGGAAAATGCCATA 15 24394011 0.978960368 2 13 92 0.941176471 0.903089987 0.117647059 0.133333333 0.235294118 15 0 1 16 2R:24393988-24394036 6 slik FBtr0290019 24393676 24394246 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2R - 24393900 24394038 3'utr slik FlyBase G19920.1 CGAATTTGTAAAGCTTTTCTCACCTAATTACCTGCAACGGAAAATGCCATACATTCTGTCTTGCCAAAAGTTGATTGTTTGTTGGAAATGCTATTTTAATGAACGAAAGTGGATTACTTGTTTGCCTATTTTTAATGTT 17 24394011 0.984509555 9 17 141 1 1.397940009 0.12 0.470588235 0.64 17 0 0 25 2R:24393900-24394038 6 11 1879 FBgn0035001 5352.49 110.13 168.49 0.002055118 0.099881958 0.065285774 1 1 1 0.01 dme-miR-277-3p 6mer3-8 TGCATT 2R 24404712 24404717 - 2R_24404712_24404717_- 1 0.999999999 1 0 SerT FBtr0072362|FBtr0343316 24404593|24404593 24405451|24405451 2R - 24404700 24404736 3'utr SerT FlyBase G26370.1 TAGAGAACGCCCTGTACAATGCATTACTCAACCGTTT 26 24404713 0.720391733 5 26 126 1 1.531478917 0.176470588 0.192307692 0.382352941 26 0 0 34 2R:24404700-24404736 6 SerT FBtr0072362|FBtr0343316 24404593|24404593 24405451|24405451 TGCATT 6mer3-8 dme-miR-277-3p 2R - 24404702 24404739 3'utr SerT FlyBase G19950.1 AGATAGAGAACGCCCTGTACAATGCATTACTCAACCGT 14 24404713 0.702134529 5 14 63 1 1.414973348 0.230769231 0.571428571 0.769230769 14 0 0 26 2R:24404702-24404739 6 19.5 1880 FBgn0010414 3 0.116666667 0.176666667 6.5 167.1428571 110.3773585 -4 -4 -4 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 24405175 24405181 - 2R_24405175_24405181_- 0.661615511 0.661615511 0.661615511 0 SerT FBtr0072362|FBtr0343316 24404593|24404593 24405451|24405451 2R - 24405132 24405228 3'utr SerT FlyBase G26374.1 ATCATCACCATCAGCATCAGCATCGGATCAGCAGCGATATCATTAGCTCTAGTCTTAGGCAGTCGCACAGCCATAGTTTAAGCCTCTGCTCGGTGCA 76 24405174 0.982051349 10 72 536 0.957894737 1.959041392 0.031578947 0.236842105 0.389473684 76 4 0 91 2R:24405132-24405228 7 SerT FBtr0072362|FBtr0343316 24404593|24404593 24405451|24405451 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R - 24405155 24405228 3'utr SerT FlyBase G19953.1 ATCATCACCATCAGCATCAGCATCGGATCAGCAGCGATATCATTAGCTCTAGTCTTAGGCAGTCGCACAGCCAT 46 24405174 0.980204359 10 46 319 1 1.886490725 0.090909091 0.434782609 0.662337662 46 0 0 77 2R:24405155-24405228 7 55.5 1881 FBgn0010414 3 0.116666667 0.176666667 18.5 475.7142857 314.1509434 -7 -7 -7 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2R 24414144 24414150 + 2R_24414144_24414150_+ 0.671796082 0.671796082 0.671796082 0 CG45068 FBtr0344430 24414110 24415295 2R + 24414096 24414169 stop_codon CG45068 FlyBase G19003.1 GGAAACCGCGGCGTAGTCTTCACTTCTTGGCCAGTCCAAGTGCCTTATACCAAAGTTCTAGGTTAAGATTAACT 42 24414143 0.988669692 7 41 378 0.976744186 1.62324929 0.023255814 0.023809524 0.046511628 42 1 0 42 2R:24414096-24414169 7 CG45068 FBtr0344430 24414110 24415295 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 24414093 24414165 stop_codon CG45068 FlyBase G14462.1 GACGGAAACCGCGGCGTAGTCTTCACTTCTTGGCCAGTCCAAGTGCCTTATACCAAAGTTCTAGGTTAAGATT 23 24414143 0.985142535 6 23 188 1 1.556302501 0.138888889 0.347826087 0.583333333 23 0 0 36 2R:24414093-24414165 7 30 1882 FBgn0266438 77.02666667 2.906666667 4.47 0.389475506 10.32110092 6.711409396 1 1 1 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2R 24509897 24509903 - 2R_24509897_24509903_- 0.808818836 0.808818836 0.808818836 0 Letm1 FBtr0072347|FBtr0072347|FBtr0072348|FBtr0072348|FBtr0072349|FBtr0072349 24509762|24509762|24509506|24509506|24509762|24509762 24510085|24510085|24510085|24510085|24510085|24510085 2R - 24509837 24510035 3'utr Letm1 FlyBase G26380.1 ACCTAAGCCGAAGTGATGTGTTGGAGTAGGGGCGGTGGCGGTGTTGCTCGTGTGTCCCATATTGTTCCGACTATGCAATGAATTAACTGTTACCATTTAACATAAACGTAGCAGGATGAGGAGAGTTTGCTATACTTAACGCGTGGCTGTAGTACGGTATCTTCTTTAAGTAAGGCACAAATCAGAAACTACTAGAAAT 49 24509892 0.975966539 15 48 314 0.983870968 1.785329835 0.048387097 0.224489796 0.387096774 49 1 0 61 2R:24509837-24510035 7 Letm1 FBtr0072349|FBtr0072349|FBtr0072348|FBtr0072348|FBtr0072347|FBtr0072347 24509762|24509762|24509506|24509506|24509762|24509762 24510085|24510085|24510085|24510085|24510085|24510085 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2R - 24509873 24509926 3'utr Letm1 FlyBase G19956.1 AGCAGGATGAGGAGAGTTTGCTATACTTAACGCGTGGCTGTAGTACGGTATCTT 28 24509892 0.971348171 2 27 159 1 1.602059991 0.1 0.285714286 0.5 28 0 0 40 2R:24509873-24509926 7 30 1883 FBgn0019886 912.2366667 28.66666667 44.02666667 0.032886203 1.046511628 0.681405209 -11 -11 -11 0.01 dme-miR-8-3p 7mer-A1 AGTATTA 2R 24523359 24523365 - 2R_24523359_24523365_- 0.823349562 0.823349562 0.823349562 0 CG4612 FBtr0306137 24521872 24524317 2R - 24523341 24523382 3'utr CG4612 FlyBase G26393.1 CCTGCGGACAGTACATGAGTATTAAAATTTTAGCGATTACAA 12 24523367 0.876618982 2 10 76 0.833333333 1 0.25 0 0 12 2 0 10 2R:24523341-24523382 7 CG4612 FBtr0306137 24521872 24524317 AGTATTA 7mer-A1 dme-miR-8-3p 2R - 24523340 24523385 3'utr CG4612 FlyBase G19968.1 TATCCTGCGGACAGTACATGAGTATTAAAATTTTAGCGATTACAAG 7 24523367 0.967021972 3 7 44 1 1 0.3 0.428571429 0.6 7 0 0 10 2R:24523340-24523385 7 9.5 1884 FBgn0035016 1738.693333 59.93333333 91.91666667 0.005463873 0.158509455 0.103354488 2 2 2 0.01 dme-miR-980-3p 7mer-A1 GCAGCTA 2R 24524194 24524200 - 2R_24524194_24524200_- 0.823349562 0.823349562 0.823349562 0 CG4612 FBtr0306137|FBtr0072346 24521872|24523703 24524317|24524317 2R - 24524092 24524239 3'utr CG4612 FlyBase G26396.1 ATATAAACCTATATAGATATTTACGAGAAATTGTATCGAGCAGCTAGGCGGACATTCAGGCAGCAGACGGACGGGAGGCAGCTCCTTCGCATATACACTTAGATGTAGGCAAAAGTCTTGCAACACAGTTGAAATTTATAGAAAGAAC 37 24524208 0.96359276 16 33 172 0.840909091 1.267171728 0.363636364 0.135135135 0.272727273 37 6 1 37 2R:24524092-24524239 7 CG4612 FBtr0306137|FBtr0072346 24521872|24523703 24524317|24524317 GCAGCTA 7mer-A1 dme-miR-980-3p 2R - 24524152 24524221 3'utr CG4612 FlyBase G19970.1 ATTTACGAGAAATTGTATCGAGCAGCTAGGCGGACATTCAGGCAGCAGACGGACGGGAGGCAGCTCCTTC 29 24524208 0.92062927 9 24 97 0.808510638 1.579783597 0.255319149 0.344827586 0.595744681 29 9 0 38 2R:24524152-24524221 7 19.5 1885 FBgn0035016 1738.693333 59.93333333 91.91666667 0.011215319 0.325361513 0.212148685 8 8 8 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT 2R 24524299 24524305 - 2R_24524299_24524305_- 0.658999527 0.658999527 0.658999527 0 CG4612 FBtr0306137|FBtr0072346 24521872|24523703 24524317|24524317 2R - 24524287 24524325 stop_codon CG4612 FlyBase G26397.1 ACTACTAAGGCTTCGGCGGCGGCAGCTGATCCAAGGACA 9 24524314 0.697929103 4 9 29 1 1 0.3 0.111111111 0.2 9 0 0 10 2R:24524287-24524325 7 CG4612 FBtr0306137|FBtr0072346 24521872|24523703 24524317|24524317 GGCAGCT 7mer-m8 dme-miR-980-3p 2R - 24524290 24524319 stop_codon CG4612 FlyBase G19971.1 AAGGCTTCGGCGGCGGCAGCTGATCCAAGG 7 24524314 0.618939687 3 4 21 0.636363636 0.84509804 0 0.285714286 0.545454545 7 4 0 7 2R:24524290-24524319 7 8 1886 FBgn0035016 1738.693333 59.93333333 91.91666667 0.004601156 0.133481646 0.087035358 9 9 9 0.01 dme-miR-278-3p 6mer3-8 CCCACC 2R 24533454 24533459 - 2R_24533454_24533459_- 1 1 1 0 CG4622 FBtr0300490|FBtr0072344 24533372|24533372 24533500|24533500 2R - 24533449 24533482 3'utr CG4622 FlyBase G26402.1 AATACAAACCACATCAATTCCCGCCCACCATATG 26 24533465 0.685718313 2 26 71 1 1.51851394 0 0.230769231 0.393939394 26 0 0 33 2R:24533449-24533482 6 CG4622 FBtr0300490|FBtr0072344 24533372|24533372 24533500|24533500 CCCACC 6mer3-8 dme-miR-278-3p 2R - 24533449 24533482 3'utr CG4622 FlyBase G19973.1 AATACAAACCACATCAATTCCCGCCCACCATATG 9 24533465 0.669045635 2 9 25 1 1.113943352 0 0.444444444 0.615384615 9 0 0 13 2R:24533449-24533482 6 17.5 1887 FBgn0035021 190.4166667 12.30333333 18.86 0.09190372 1.422378759 0.927889714 6 6 6 0.01 dme-miR-8-3p 6mer2-7 AGTATT 2R 24557174 24557179 + 2R_24557174_24557179_+ 1 1 1 0 ITP FBtr0290219 24556424 24558961 2R + 24557142 24557206 3'utr ITP FlyBase G19026.1 ACACACATATATACACCGCAATCGAGACCGAAAGTATTTTGCAAATGTATTACACTTACAATTTT 16 24557181 0.978272963 5 16 109 1 1.278753601 0 0.1875 0.315789474 16 0 0 19 2R:24557142-24557206 6 ITP FBtr0290219 24556424 24558961 AGTATT 6mer2-7 dme-miR-8-3p 2R + 24557163 24557243 3'utr ITP FlyBase G14477.1 TCGAGACCGAAAGTATTTTGCAAATGTATTACACTTACAATTTTGTGCTATTTTGTAAAGATGAAACCCTGAATTAGTGTA 14 24557180 0.980865037 7 14 97 1 1.397940009 0 0.642857143 0.8 14 0 0 25 2R:24557163-24557243 6 9.5 1888 FBgn0035023 1304.81 56.75666667 87.48 0.007280754 0.167381218 0.108596251 -7 -6 -6.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 24557543 24557549 + 2R_24557543_24557549_+ 0.801970437 0.801970437 0.801970437 0 ITP FBtr0290219|FBtr0290219|FBtr0290219 24556424|24556424|24556424 24558961|24558961|24558961 2R + 24557499 24557593 3'utr ITP FlyBase G19028.1 AAAGGATAATCAATCATTCGCTGGCTATTTGAGAGCATCAAAATTGTGATAAATGAGAATTAGAATGCGAATGCGCGACGCAGGACACCGCCAGA 236 24557542 0.970189644 11 222 1268 0.939285714 1.419955748 0.189285714 0.156779661 0.289285714 236 8 9 263 2R:24557499-24557593 7 ITP FBtr0290219|FBtr0290219|FBtr0290219 24556424|24556424|24556424 24558961|24558961|24558961 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 24557491 24557583 3'utr ITP FlyBase G14478.1 AAATTAATAAAGGATAATCAATCATTCGCTGGCTATTTGAGAGCATCAAAATTGTGATAAATGAGAATTAGAATGCGAATGCGCGACGCAGGA 156 24557542 0.969239642 10 148 831 0.946188341 1.421192468 0.174887892 0.314102564 0.520179372 156 5 7 211 2R:24557491-24557583 7 182 1889 FBgn0035023 1304.81 56.75666667 87.48 0.13948391 3.206671757 2.080475537 1 1 1 0.01 dme-miR-980-3p 6mer2-7 GCAGCT 2R 24557636 24557641 + 2R_24557636_24557641_+ 1 1 1 0 ITP FBtr0290219 24556424 24558961 2R + 24557597 24557656 3'utr ITP FlyBase G19029.1 AGAGACCGCCATACAGAAGGCGACAGAGACAGACAGACTGCAGCTGGCGATTTGCGCGCG 8 24557647 0.875103766 5 8 19 1 0.954242509 0.333333333 0.125 0.222222222 8 0 0 9 2R:24557597-24557656 6 ITP FBtr0290219 24556424 24558961 GCAGCT 6mer2-7 dme-miR-980-3p 2R + 24557614 24557656 3'utr ITP FlyBase G14479.1 AGGCGACAGAGACAGACAGACTGCAGCTGGCGATTTGCGCGCG 6 24557647 0.918304157 3 5 17 0.9 0.954242509 0.7 0.666666667 0.8 6 1 0 9 2R:24557614-24557656 6 6.5 1890 FBgn0035023 1304.81 56.75666667 87.48 0.004981568 0.114523991 0.074302698 -11 -11 -11 0.01 dme-miR-282-5p 7mer-m8 AGAGGCT 2R 24558069 24558075 + 2R_24558069_24558075_+ 0.631524569 0.631524569 0.631524569 0 ITP FBtr0290219 24556424 24558961 2R + 24558035 24558100 3'utr ITP FlyBase G19030.1 AATGCTTCGGATCGCCCTTCTTCAACGCCTGCATAGAGGCTCTTCAGCTGCACGAGGAGATGGACA 65 24558068 0.913785312 6 62 363 0.948717949 1.86923172 0.397435897 0.184615385 0.320512821 65 4 0 74 2R:24558035-24558100 7 ITP FBtr0290219 24556424 24558961 AGAGGCT 7mer-m8 dme-miR-282-5p 2R + 24558047 24558091 3'utr ITP FlyBase G14480.1 CGCCCTTCTTCAACGCCTGCATAGAGGCTCTTCAGCTGCACGAGG 25 24558068 0.874456466 3 20 129 0.815789474 1.491361694 0.552631579 0.32 0.552631579 25 7 0 31 2R:24558047-24558091 7 41 1891 FBgn0035023 1304.81 56.75666667 87.48 0.031422199 0.722382099 0.468678555 1 1 1 0.01 dme-miR-79-3p 6mer2-7 AGCTTT 2R 24558473 24558478 + 2R_24558473_24558478_+ 0.867019569 0.999825926 0.933422747 0.093908235 ITP FBtr0300186|FBtr0290219 24558137|24556424 24558961|24558961 2R + 24558448 24558492 3'utr ITP FlyBase G19032.1 CATCTGTCATGAAACAGTCTCGTGGAGCTTTTAGTTGTAGTGAAT 12 24558478 0.988365208 8 12 114 1 1.113943352 0.153846154 0.083333333 0.153846154 12 0 0 13 2R:24558448-24558492 6 ITP FBtr0290219|FBtr0300186 24556424|24558137 24558961|24558961 AGCTTT 6mer2-7 dme-miR-79-3p 2R + 24558458 24558492 3'utr ITP FlyBase G14481.1 GAAACAGTCTCGTGGAGCTTTTAGTTGTAGTGAAT 10 24558479 0.610112055 7 9 95 0.933333333 1.146128036 0.4 0.5 0.666666667 10 1 0 14 2R:24558458-24558492 6 11 1892 FBgn0035023 1304.81 56.75666667 87.48 0.008430346 0.193809831 0.125743027 -5 -6 -5.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 24558909 24558915 + 2R_24558909_24558915_+ 0.661615511 0.661615511 0.661615511 0 ITP FBtr0300186|FBtr0290219 24558137|24556424 24558961|24558961 2R + 24558890 24558934 3'utr ITP FlyBase G19035.1 TAATTTAAACTTGTTTGGATCTAGTCGTAAAATATAAATAAAGAT 51 24558907 0.626572594 12 43 451 0.877192982 1.096910013 0.01754386 0.098039216 0.192982456 51 4 3 50 2R:24558890-24558934 7 ITP FBtr0290219|FBtr0300186 24556424|24558137 24558961|24558961 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 24558886 24558938 3'utr ITP FlyBase G14485.1 TAATTAATTTAAACTTGTTTGGATCTAGTCGTAAAATATAAATAAAGATTGTA 31 24558904 0.644614109 12 25 267 0.840909091 1.267171728 0.113636364 0.35483871 0.545454545 31 6 1 37 2R:24558886-24558938 7 39.5 1893 FBgn0035023 1304.81 56.75666667 87.48 0.030272607 0.695953486 0.451531779 2 5 3.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 2R 24568160 24568165 - 2R_24568160_24568165_- 1 1 1 0 Fcp1 FBtr0343489|FBtr0072342 24567985|24567985 24568459|24568459 2R - 24568154 24568185 3'utr Fcp1 FlyBase G26412.1 TGAATCAAAAACTCTCATTCTGATCTAATGTA 9 24568166 0.684736527 4 8 63 0.846153846 1.041392685 0 0.222222222 0.461538462 9 2 0 11 2R:24568154-24568185 6 Fcp1 FBtr0343489|FBtr0072342 24567985|24567985 24568459|24568459 TGATCT 6mer3-8 dme-bantam-3p 2R - 24568128 24568177 3'utr Fcp1 FlyBase G19979.1 AAACTCTCATTCTGATCTAATGTAAATTGAAGCCTACTGTAAATGTAAAT 6 24568165 0.990418314 4 5 46 0.8 0.903089987 0 0.333333333 0.6 6 2 0 8 2R:24568128-24568177 6 6.5 1894 FBgn0035026 362.9966667 13.60666667 20.97333333 0.017906501 0.477707006 0.309917355 1 0 0.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2R 24577629 24577634 + 2R_24577629_24577634_+ 1 1 1 0 Start1 FBtr0089868|FBtr0305054|FBtr0089867|FBtr0343485 24577463|24577463|24577260|24577463 24577676|24577676|24577676|24577676 2R + 24577553 24577648 3'utr Start1 FlyBase G19067.1 AATTTGAAGCAGGAGAGCGAGTTCAGTGCTGTAAGTTTATTGAGTATTTTATGTATATGTATGGCATAAGTTCTATGTACCTATATGCACGGCTTA 18 24577628 0.987528605 11 18 158 1 1.342422681 0.227272727 0.166666667 0.318181818 18 0 0 22 2R:24577553-24577648 6 Start1 FBtr0089867|FBtr0343485|FBtr0089868|FBtr0305054 24577260|24577463|24577463|24577463 24577676|24577676|24577676|24577676 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2R + 24577613 24577640 3'utr Start1 FlyBase G14505.1 ATGGCATAAGTTCTATGTACCTATATGC 5 24577628 0.873907199 2 5 36 1 0.77815125 0.5 0.2 0.333333333 5 0 0 6 2R:24577613-24577640 6 7 1895 FBgn0035028 314 17.47 26.84 0.022292994 0.400686892 0.260804769 1 1 1 0.01 dme-miR-92b-3p 8mer-m1 GTGCAATT 2R 24601850 24601857 + 2R_24601850_24601857_+ 0.59645845 0.596698356 0.596578403 0.000169635 CG3548 FBtr0072315 24601611 24602367 2R + 24601780 24601891 3'utr CG3548 FlyBase G19071.1 CGCCGGACGCGCATACAATACTCATCGACACACTCAAGTTGCCACTCGGACGAATGGACTGTTGTTTATTGTGCAATTCGCACGAGACGAACTCACAGGCATTGCATTTTCA 35 24601879 0.977236267 9 35 224 1 1.643452676 0.181818182 0.228571429 0.386363636 35 0 0 44 2R:24601780-24601891 8 CG3548 FBtr0072315 24601611 24602367 GTGCAATT 8mer-m1 dme-miR-92b-3p 2R + 24601849 24601916 3'utr CG3548 FlyBase G14508.2 TGTGCAATTCGCACGAGACGAACTCACAGGCATTGCATTTTCAAGAAATTAGTATTACATAATTGTAT 9 24601879 0.978425132 3 6 52 0.8125 0.812913357 0.1875 0.444444444 0.6875 9 2 1 13 2R:24601849-24601916 8 2.5 1896 FBgn0035033 297.01 16.31333333 24.96666667 0.008417225 0.153248876 0.100133511 -29 -29 -29 0.01 dme-miR-8-3p 7mer-m8 CAGTATT 2R 24602054 24602060 + 2R_24602054_24602060_+ 0.661615243 0.661615243 0.661615243 0 CG3548 FBtr0072315 24601611 24602367 2R + 24602036 24602080 3'utr CG3548 FlyBase G19073.1 CGCAATTTACTCATCAGTCAGTATTCTCTATGGCCACTGTATTAT 39 24602066 0.798322698 6 38 313 1 1.653212514 0.022222222 0.102564103 0.222222222 39 0 0 45 2R:24602036-24602080 7 CG3548 FBtr0072315 24601611 24602367 CAGTATT 7mer-m8 dme-miR-8-3p 2R + 24601983 24602092 3'utr CG3548 FlyBase G14509.1 ACAAACTCGAAAATACTCATGCACAGACTCTGAATAAGTTCCCCTTTGCAGAACGCAATTTACTCATCAGTCAGTATTCTCTATGGCCACTGTATTATTTTTATACCTTC 37 24602066 0.975211145 8 34 276 0.929824561 1.72427587 0.105263158 0.405405405 0.614035088 37 4 0 53 2R:24601983-24602092 7 31.5 1897 FBgn0035033 297.01 16.31333333 24.96666667 0.106057035 1.93093584 1.261682243 -12 -12 -12 0.01 dme-miR-932-5p 7mer-m8 GGAATTG 2R 24671705 24671711 - 2R_24671705_24671711_- 0.70297287 0.70297287 0.70297287 0 Mmp1 FBtr0304005|FBtr0304008|FBtr0273263|FBtr0304009|FBtr0304011|FBtr0304010|FBtr0306656 24671292|24671292|24671292|24671292|24671292|24671292|24671292 24673278|24672142|24672142|24672765|24672765|24673278|24673278 2R - 24671686 24671763 3'utr Mmp1 FlyBase G26433.1 GCTGTTTTGGTAATGACAAATTGCGATATTAAATTTAACGAGCCATATGCAAGGAATTGGAGAGAACCAAACAAAAAT 51 24671716 0.865118391 8 43 256 0.836065574 1.008600172 0.229508197 0.176470588 0.31147541 51 6 4 51 2R:24671686-24671763 7 Mmp1 FBtr0304011|FBtr0306656|FBtr0304009|FBtr0304010|FBtr0273263|FBtr0304005|FBtr0304008 24671292|24671292|24671292|24671292|24671292|24671292|24671292 24672765|24673278|24672765|24673278|24672142|24673278|24672142 GGAATTG 7mer-m8 dme-miR-932-5p 2R - 24671689 24671762 3'utr Mmp1 FlyBase G19998.1 CTGTTTTGGTAATGACAAATTGCGATATTAAATTTAACGAGCCATATGCAAGGAATTGGAGAGAACCAAACAAA 23 24671716 0.975477956 4 20 124 0.868421053 1.51851394 0.184210526 0.47826087 0.684210526 23 5 0 33 2R:24671689-24671762 7 22 1898 FBgn0035049 2672.446667 111.6666667 172.33 0.008232157 0.197014925 0.127662044 5 5 5 0.01 dme-miR-283-5p 7mer-A1 GATATTA 2R 24671733 24671739 - 2R_24671733_24671739_- 0.782911824 0.782911824 0.782911824 0 Mmp1 FBtr0304005|FBtr0304008|FBtr0273263|FBtr0304009|FBtr0304011|FBtr0304010|FBtr0306656 24671292|24671292|24671292|24671292|24671292|24671292|24671292 24673278|24672142|24672142|24672765|24672765|24673278|24673278 2R - 24671686 24671763 3'utr Mmp1 FlyBase G26433.1 GCTGTTTTGGTAATGACAAATTGCGATATTAAATTTAACGAGCCATATGCAAGGAATTGGAGAGAACCAAACAAAAAT 51 24671716 0.865118391 8 43 256 0.836065574 1.008600172 0.229508197 0.176470588 0.31147541 51 6 4 51 2R:24671686-24671763 7 Mmp1 FBtr0304011|FBtr0306656|FBtr0304009|FBtr0304010|FBtr0273263|FBtr0304005|FBtr0304008 24671292|24671292|24671292|24671292|24671292|24671292|24671292 24672765|24673278|24672765|24673278|24672142|24673278|24672142 GATATTA 7mer-A1 dme-miR-283-5p 2R - 24671689 24671762 3'utr Mmp1 FlyBase G19998.1 CTGTTTTGGTAATGACAAATTGCGATATTAAATTTAACGAGCCATATGCAAGGAATTGGAGAGAACCAAACAAA 23 24671716 0.975477956 4 20 124 0.868421053 1.51851394 0.184210526 0.47826087 0.684210526 23 5 0 33 2R:24671689-24671762 7 12.5 1899 FBgn0035049 2672.446667 111.6666667 172.33 0.004677362 0.111940299 0.072535252 -23 -23 -23 0.01 dme-miR-92b-3p 7mer-A1 TGCAATA 2R 24756305 24756311 + 2R_24756305_24756311_+ 0.782911824 0.782911824 0.782911824 0 CG30421 FBtr0072369|FBtr0343495|FBtr0343494 24756087|24756087|24756087 24756976|24756385|24756976 2R + 24756273 24756329 3'utr CG30421 FlyBase G19110.1 AATTTAAGATACGTACTCATATATACGATACTTGCAATACTGCATAACGTTTGAAAG 14 24756293 0.736913037 6 14 103 1 1.204119983 0.25 0.142857143 0.25 14 0 0 16 2R:24756273-24756329 7 CG30421 FBtr0343494|FBtr0343495|FBtr0072369 24756087|24756087|24756087 24756976|24756385|24756976 TGCAATA 7mer-A1 dme-miR-92b-3p 2R + 24756213 24756306 3'utr CG30421 FlyBase G14532.1 TTTCTTAACCGGAGCTCCCGAGCGATAAGCTCGGGATGAAGATGTTATACAACTTTGTTTAATTTAAGATACGTACTCATATATACGATACTTG 10 24756293 0.986019199 6 8 75 0.833333333 1 0.25 0.2 0.333333333 10 2 0 10 2R:24756213-24756306 2 8.5 1900 FBgn0050421 690.78 16.95 26.02 0.012304931 0.501474926 0.326671791 12 12 12 0.01 dme-miR-1007-3p 7mer-m8 TGAGCTT 2R 24766341 24766347 + 2R_24766341_24766347_+ 0.620203442 0.620203442 0.620203442 0 CG3894 FBtr0300130 24766264 24766750 2R + 24766331 24766412 3'utr CG3894 FlyBase G19117.1 GAAGTGTGCATGAGCTTGGGTCGTGATAGTCTGTTTACCCATATATATATTGTATACGCCTGCAGCGCTAGTGAAGGGCCCT 24 24766363 0.953718487 13 23 171 0.931034483 1.431363764 0.24137931 0.208333333 0.344827586 24 2 0 27 2R:24766331-24766412 7 CG3894 FBtr0300130 24766264 24766750 TGAGCTT 7mer-m8 dme-miR-1007-3p 2R + 24766317 24766373 3'utr CG3894 FlyBase G14538.1 AATGCGTGTTTGGGGAAGTGTGCATGAGCTTGGGTCGTGATAGTCTGTTTACCCATA 17 24766362 0.771413649 9 16 135 0.965517241 1.146128036 0.034482759 0.529411765 0.724137931 17 0 1 28 2R:24766317-24766373 7 15.5 1901 FBgn0035059 104 8.213333333 12.5 0.149038462 1.887175325 1.24 -22 -21 -21.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2R 24766540 24766545 + 2R_24766540_24766545_+ 1 1 1 0 CG3894 FBtr0300130 24766264 24766750 2R + 24766485 24766599 3'utr CG3894 FlyBase G19119.1 TTGTAATTTCTGTAGATATATTTTATACTTTGGTTCTAGTTACCAATACACTCTTTACCTGGACGACCTATGTTGTAGATCATAATCCTCGCCATCGTTTGTGTATGTGTGGATC 217 24766539 0.805256069 16 209 1532 0.967479675 1.677606953 0.227642276 0.124423963 0.227642276 217 4 4 238 2R:24766485-24766599 6 CG3894 FBtr0300130 24766264 24766750 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2R + 24766513 24766642 3'utr CG3894 FlyBase G14540.2 TTTGGTTCTAGTTACCAATACACTCTTTACCTGGACGACCTATGTTGTAGATCATAATCCTCGCCATCGTTTGTGTATGTGTGGATCACCAACACCAGCGGAGGTCTCCTGGGCGCCCCGACTTTTAGCG 146 24766539 0.803524858 15 141 962 0.969026549 1.641474111 0.230088496 0.431506849 0.632743363 146 3 4 219 2R:24766513-24766642 6 148 1902 FBgn0035059 104 8.213333333 12.5 1.423076923 18.01948052 11.84 1 1 1 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2R 24768647 24768653 - 2R_24768647_24768653_- 0.443131018 0.443131018 0.443131018 0 Eps-15 FBtr0072433|FBtr0072435|FBtr0072434 24768312|24768312|24768312 24768680|24768680|24768680 2R - 24768631 24768675 3'utr Eps-15 FlyBase G26447.1 ATGAAAACCTTGGTGGGTTGGATGTGATTGACCCATGAGAAGTTG 17 24768647 0.859046333 4 16 131 1 1.322219295 0.238095238 0.235294118 0.380952381 17 0 0 21 2R:24768631-24768675 7 Eps-15 FBtr0072434|FBtr0072433|FBtr0072435 24768312|24768312|24768312 24768680|24768680|24768680 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 24768623 24768670 3'utr Eps-15 FlyBase G20011.1 AACCTTGGTGGGTTGGATGTGATTGACCCATGAGAAGTTGCAGTGGCA 15 24768647 0.857747814 2 15 112 1 1.301029996 0.3 0.333333333 0.5 15 0 0 20 2R:24768623-24768670 7 15.5 1903 FBgn0035060 692.06 19.62666667 29.91 0.022396902 0.789741848 0.518221331 -6 -6 -6 0.01 dme-miR-304-5p 6mer2-7 GAGATT 2R 24788051 24788056 - 2R_24788051_24788056_- 1 1 1 0 Reg-5 FBtr0072427|FBtr0305671 24788006|24788006 24788287|24788287 2R - 24788007 24788096 3'utr Reg-5 FlyBase G26491.1 AATTTTATTTATTCGCGTGCATTAGTCGTAAGATCACATAGAGATTCTTGAGTAATAAACCGCATGATGATTATCATTGTTACGAACGTA 57 24788075 0.874270557 13 56 401 0.970588235 1.819543936 0.235294118 0.175438596 0.308823529 57 2 0 66 2R:24788007-24788096 6 Reg-5 FBtr0305671|FBtr0072427 24788006|24788006 24788287|24788287 GAGATT 6mer2-7 dme-miR-304-5p 2R - 24788011 24788090 3'utr Reg-5 FlyBase G20034.1 ATTTATTCGCGTGCATTAGTCGTAAGATCACATAGAGATTCTTGAGTAATAAACCGCATGATGATTATCATTGTTACGAA 42 24788058 0.873442876 9 41 300 0.984126984 1.792391689 0.111111111 0.30952381 0.53968254 42 1 0 62 2R:24788011-24788090 6 24.5 1904 FBgn0015801 337.6666667 24.48 36.89333333 0.072556762 1.000816993 0.664076617 19 2 10.5 0.01 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 24788132 24788138 - 2R_24788132_24788138_- 0.469676672 0.4822437 0.475960186 0.008886211 Reg-5 FBtr0072427|FBtr0305671 24788006|24788006 24788287|24788287 2R - 24788111 24788284 3'utr Reg-5 FlyBase G26492.1 CGCGGTCAGAGGATCCGCAGGCCTAGACCTAAGTCCTTGTGTGAATGTGATAGAGCAGATGAGGAGATCCTGCATCATAGAGTGCGAGAGTGAACGTGTGAGTCTTCTAGTTGTAGCCGTTTGAGGAGTTTTCTTGAATGCACTTGAGCTTTAATGGAATTTCGTATCGTATTC 597 24788140 0.82031255 30 572 4538 0.957983193 2.136086097 0.256302521 0.162479062 0.299719888 597 26 4 684 2R:24788111-24788284 7 Reg-5 FBtr0305671|FBtr0072427 24788006|24788006 24788287|24788287 AGCTTTA 7mer-A1 dme-miR-79-3p 2R - 24788113 24788271 3'utr Reg-5 FlyBase G20035.1 TCCGCAGGCCTAGACCTAAGTCCTTGTGTGAATGTGATAGAGCAGATGAGGAGATCCTGCATCATAGAGTGCGAGAGTGAACGTGTGAGTCTTCTAGTTGTAGCCGTTTGAGGAGTTTTCTTGAATGCACTTGAGCTTTAATGGAATTTCGTATCGTAT 366 24788140 0.849085515 30 360 2638 0.983576642 2.731588765 0.28649635 0.366120219 0.576642336 366 9 0 539 2R:24788113-24788271 7 353 1905 FBgn0015801 337.6666667 24.48 36.89333333 1.045409674 14.41993464 9.568124322 2 2 2 0.01 dme-miR-304-5p 7mer-A1 GAGATTA 2R 24886506 24886512 + 2R_24886506_24886512_+ 0.823349562 0.823349562 0.823349562 0 NKAIN FBtr0301847|FBtr0305056|FBtr0301849|FBtr0301848 24885969|24885969|24885969|24885969 24886945|24888615|24886945|24886945 2R + 24886432 24886523 5'utr NKAIN FlyBase G19152.1 TTTGTTGAGAATACGAGCGATAAATGAAATTTTGAGCCAATTGCAACCAGATGCCTTGGATGTATGACGGAATAGAGATTAGAATATACAAC 35 24886488 0.978195836 13 31 206 0.829268293 1.230448921 0.268292683 0.142857143 0.268292683 35 6 1 34 2R:24886432-24886523 7 NKAIN FBtr0301848|FBtr0301849|FBtr0305056|FBtr0301847 24885969|24885969|24885969|24885969 24886945|24886945|24888615|24886945 GAGATTA 7mer-A1 dme-miR-304-5p 2R + 24886430 24886591 5'utr NKAIN FlyBase G14568.1 AATTTGTTGAGAATACGAGCGATAAATGAAATTTTGAGCCAATTGCAACCAGATGCCTTGGATGTATGACGGAATAGAGATTAGAATATACAACATACATATATATACCGATGTTATGGGCGGGAGAGCCCAGCCTCCCCAAGAGTTGCCTTTGTTGTTTAA 39 24886488 0.965242274 19 38 209 0.981818182 1.73239376 0.363636364 0.256410256 0.472727273 39 1 0 54 2R:24886430-24886591 7 8 1906 FBgn0085442 1933.686667 63.05666667 96.30333333 0.004137175 0.126870011 0.083070853 18 18 18 0.01 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 2R 24888493 24888499 + 2R_24888493_24888499_+ 0.620204031 0.620204031 0.620204031 0 NKAIN FBtr0305056|FBtr0301851|FBtr0343497 24885969|24888369|24887234 24888615|24888615|24888615 2R + 24888476 24888571 3'utr NKAIN FlyBase G19160.1 AAGCCAAGGCTACCACTTGGTGCTTTAACCACATGGATAGCATATACTTGATCAGTAAAATAACGATATCTGTAGTGCTTAATTTATACGTAAGTT 20 24888492 0.830209509 8 20 162 1 1.342422681 0.181818182 0.1 0.181818182 20 0 0 22 2R:24888476-24888571 7 NKAIN FBtr0343497|FBtr0301851|FBtr0305056 24887234|24888369|24885969 24888615|24888615|24888615 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 2R + 24888458 24888560 3'utr NKAIN FlyBase G14572.1 TATTATATCTTGTGCAACAAGCCAAGGCTACCACTTGGTGCTTTAACCACATGGATAGCATATACTTGATCAGTAAAATAACGATATCTGTAGTGCTTAATTT 13 24888492 0.984153153 7 12 95 0.961538462 1.397940009 0.038461538 0.615384615 0.807692308 13 1 0 25 2R:24888458-24888560 7 5 1907 FBgn0085442 1933.686667 63.05666667 96.30333333 0.002585734 0.079293757 0.051919283 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2R 24888583 24888589 + 2R_24888583_24888589_+ 0.671796082 0.671796082 0.671796082 0 NKAIN FBtr0305056|FBtr0301851|FBtr0343497 24885969|24888369|24887234 24888615|24888615|24888615 2R + 24888573 24888610 3'utr NKAIN FlyBase G19161.1 CTGTCGTTTTACCAAAGTGCCTTTGTAAATAAATACTT 9 24888595 0.652906795 5 8 65 0.916666667 0.740362689 0.083333333 0.333333333 0.5 9 0 1 11 2R:24888573-24888610 7 NKAIN FBtr0343497|FBtr0301851|FBtr0305056 24887234|24888369|24885969 24888615|24888615|24888615 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 24888565 24888599 3'utr NKAIN FlyBase G14573.1 GTAAGTTTCTGTCGTTTTACCAAAGTGCCTTTGTA 21 24888594 0.744534432 7 20 176 0.9375 1.477121255 0.15625 0.476190476 0.65625 21 2 0 30 2R:24888565-24888599 7 15 1908 FBgn0085442 1933.686667 63.05666667 96.30333333 0.007757203 0.237881271 0.155757848 -12 -11 -11.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-m8 CTGTGAT 2R 24909999 24910005 + 2R_24909999_24910005_+ 0.661615693 0.661615693 0.661615693 0 NaCP60E FBtr0333816|FBtr0333816|FBtr0333816|FBtr0333815|FBtr0333815|FBtr0333815 24905200|24905200|24905200|24907305|24907305|24907305 24920265|24920265|24920265|24920265|24920265|24920265 2R + 24909971 24910022 3'utr NaCP60E FlyBase G19162.1 TTAGCATCTCAAATGAGATACGCAAAATCTGTGATCAAATCCACGCCCCCTT 12 24909998 0.977141563 3 9 65 0.769230769 0.698970004 0 0.083333333 0.153846154 12 2 1 10 2R:24909971-24910022 7 NaCP60E FBtr0333816|FBtr0333816|FBtr0333816|FBtr0333815|FBtr0333815|FBtr0333815 24905200|24905200|24905200|24907305|24907305|24907305 24920265|24920265|24920265|24920265|24920265|24920265 CTGTGAT 7mer-m8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 24909984 24910012 3'utr NaCP60E FlyBase G14574.1 TGAGATACGCAAAATCTGTGATCAAATCC 6 24909998 0.954754139 2 5 23 0.833333333 0.698970004 0.166666667 0 0 6 1 0 5 2R:24909984-24910012 7 8.5 1909 FBgn0085434 365.8266667 3.443333333 5.213333333 0.023235048 2.468538238 1.630434783 1 1 1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 24959960 24959965 - 2R_24959960_24959965_- 0.755363009 0.755363009 0.755363009 0 CG2765 FBtr0113119|FBtr0113119|FBtr0113119|FBtr0308687|FBtr0308687|FBtr0308687|FBtr0308686|FBtr0308686|FBtr0308686|FBtr0113118|FBtr0113118|FBtr0113118 24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839 24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846 2R - 24959930 24959996 3'utr CG2765 FlyBase G26547.2 AAATCCCACCAAAGGTGACCTGGATACCCGACTGTGAGTCCCTGGTTCGGCAACGAGGACTGCAGAG 41 24959951 0.916515296 7 39 190 0.93877551 1.361727836 0.265306122 0.170731707 0.306122449 41 2 1 46 2R:24959930-24959996 6 CG2765 FBtr0308686|FBtr0308686|FBtr0308686|FBtr0113118|FBtr0113118|FBtr0113118|FBtr0113119|FBtr0113119|FBtr0113119|FBtr0308687|FBtr0308687|FBtr0308687 24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839 24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 24959932 24959993 3'utr CG2765 FlyBase G20073.1 TCCCACCAAAGGTGACCTGGATACCCGACTGTGAGTCCCTGGTTCGGCAACGAGGACTGCAG 30 24959951 0.947729707 9 25 147 0.830188679 1.166331422 0.471698113 0.466666667 0.698113208 30 7 2 44 2R:24959932-24959993 6 28.5 1910 FBgn0035087 3658.343333 190.7466667 291.4366667 0.007790412 0.149412834 0.097791401 -14 -14 -14 0.01 dme-miR-2b-2-5p 6mer2-7 TGAAGA 2R 24991079 24991084 - 2R_24991079_24991084_- 0.999999983 0.999989947 0.999994965 7.14E-06 zip FBtr0302575|FBtr0072398 24990946|24990568 24991607|24991136 2R - 24991025 24991163 stop_codon zip FlyBase G26564.1 TTAGATGGAGAGGATTCTGCCAATTGACGCGTTAATTATTAGATGAAGAAAAAGTTGAATCGCAGGAAGAAGGTGATGATGAAGAGCAAAATAAACGATTATATTTAATGTTTCTTTTATATAATTTCTCTGTTATTTT 31 24991072 0.972058515 12 31 191 1 1.591064607 0.230769231 0.193548387 0.358974359 31 0 0 39 2R:24991025-24991163 6 zip FBtr0302575|FBtr0072398 24990946|24990568 24991607|24991136 TGAAGA 6mer2-7 dme-miR-2b-2-5p 2R - 24991057 24991170 stop_codon zip FlyBase G20095.1 TGAATCATTAGATGGAGAGGATTCTGCCAATTGACGCGTTAATTATTAGATGAAGAAAAAGTTGAATCGCAGGAAGAAGGTGATGATGAAGAGCAAAATAAACGATTATATTTA 27 24991084 0.909120612 11 26 136 0.972222222 1.544068044 0.444444444 0.259259259 0.444444444 27 1 0 35 2R:24991057-24991170 6 10.5 1911 FBgn0265434 6756.406667 120.88 185.8533333 0.001554081 0.086863005 0.056496162 -12 0 -6 0.01 dme-miR-13b-2-5p 7mer-m1 TTGACGC 2R 24991134 24991140 - 2R_24991134_24991140_- 0.829692068 0.829692068 0.829692068 0 zip FBtr0302575 24990946 24991607 2R - 24991025 24991163 stop_codon zip FlyBase G26564.1 TTAGATGGAGAGGATTCTGCCAATTGACGCGTTAATTATTAGATGAAGAAAAAGTTGAATCGCAGGAAGAAGGTGATGATGAAGAGCAAAATAAACGATTATATTTAATGTTTCTTTTATATAATTTCTCTGTTATTTT 31 24991140 0.972058515 12 31 191 1 1.591064607 0.230769231 0.193548387 0.358974359 31 0 0 39 2R:24991025-24991163 7 zip FBtr0302575 24990946 24991607 TTGACGC 7mer-m1 dme-miR-13b-2-5p 2R - 24991057 24991170 stop_codon zip FlyBase G20095.1 TGAATCATTAGATGGAGAGGATTCTGCCAATTGACGCGTTAATTATTAGATGAAGAAAAAGTTGAATCGCAGGAAGAAGGTGATGATGAAGAGCAAAATAAACGATTATATTTA 27 24991140 0.909120612 11 26 136 0.972222222 1.544068044 0.444444444 0.259259259 0.444444444 27 1 0 35 2R:24991057-24991170 7 15 1912 FBgn0265434 6756.406667 120.88 185.8533333 0.002220115 0.124090007 0.080708803 0 0 0 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 25073733 25073738 - 2R_25073733_25073738_- 1 1 1 0 gol FBtr0300178 25073667 25074917 2R - 25073723 25073752 3'utr gol FlyBase G26605.1 TGAAACAAGACCATGCTGTGCTAGACACCT 25 25073739 0.704674315 3 25 85 1 1.477121255 0 0.2 0.333333333 25 0 0 30 2R:25073723-25073752 6 gol FBtr0300178 25073667 25074917 GCTGTG 6mer2-7 dme-miR-1008-3p 2R - 25073723 25073760 3'utr gol FlyBase G20122.1 ACCAACTTTGAAACAAGACCATGCTGTGCTAGACACCT 23 25073731 0.817010128 3 21 89 0.897435897 0.942008053 0.025641026 0.47826087 0.692307692 23 1 3 35 2R:25073723-25073760 6 24 1913 FBgn0004919 407.4766667 15.40666667 23.45 0.058899078 1.5577672 1.023454158 1 -7 -3 0.01 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 25073939 25073946 - 2R_25073939_25073946_- 0.625364269 0.625364269 0.625364269 0 gol FBtr0300178 25073667 25074917 2R - 25073929 25073988 3'utr gol FlyBase G26606.1 CATTTTTATGTACTTACATTATTATTGCTTAATTCGTTTGATTGCATTTATTTTTCAATT 165 25073947 0.815672286 8 163 2036 0.987068966 2.359835482 0.409482759 0.303030303 0.504310345 165 3 0 229 2R:25073929-25073988 8 gol FBtr0300178 25073667 25074917 TGCATTTA 8mer-A1 dme-miR-277-3p 2R - 25073890 25073987 3'utr gol FlyBase G20123.1 ATTTTTATGTACTTACATTATTATTGCTTAATTCGTTTGATTGCATTTATTTTTCAATTGTTTTTATAGCTCATACATAAATTATTTATATTCCATTT 103 25073947 0.992849771 9 102 1278 0.985915493 2.146128036 0.35915493 0.281553398 0.478873239 103 2 0 140 2R:25073890-25073987 8 126 1914 FBgn0004919 407.4766667 15.40666667 23.45 0.30922016 8.178277802 5.373134328 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 2R 25074028 25074033 - 2R_25074028_25074033_- 0.91984507 0.990202363 0.955023716 0.049750124 gol FBtr0300178 25073667 25074917 2R - 25074000 25074085 3'utr gol FlyBase G26607.1 AATCGCAGCCAGCGCATATTGTGAATCAATGACTGCTGTAATATCACAGGTGCCAAAGTATTTGCTTTTAGTTTTTTATATTAAAT 47 25074053 0.880427914 13 45 297 0.950819672 1.286306739 0.180327869 0.276595745 0.442622951 47 1 2 58 2R:25074000-25074085 6 gol FBtr0300178 25073667 25074917 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 25074012 25074169 3'utr gol FlyBase G20124.1 AAGCTGTAGAAAAGGTAATGGTAAATGCAATAAATATAGCAAGATCACCGACTGTGTTGCTAGTCACCCATAGACGGCTACACAAATCGCAGCCAGCGCATATTGTGAATCAATGACTGCTGTAATATCACAGGTGCCAAAGTATTTGCTTTTAGTTT 63 25074049 0.814913105 23 62 377 0.978947368 1.968482949 0.189473684 0.428571429 0.621052632 63 2 0 93 2R:25074012-25074169 6 12 1915 FBgn0004919 407.4766667 15.40666667 23.45 0.029449539 0.7788836 0.511727079 20 16 18 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2R 25074104 25074110 - 2R_25074104_25074110_- 0.822800784 0.434356985 0.628578884 0.274671245 gol FBtr0300178|FBtr0306330 25073667|25072625 25074917|25074917 2R - 25074086 25074153 3'utr gol FlyBase G26607.2 AATGGTAAATGCAATAAATATAGCAAGATCACCGACTGTGTTGCTAGTCACCCATAGACGGCTACACA 30 25074113 0.816100577 11 27 161 0.885714286 1.014240439 0 0.166666667 0.285714286 30 2 2 31 2R:25074086-25074153 7 gol FBtr0300178|FBtr0306330 25073667|25072625 25074917|25074917 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R - 25074012 25074169 3'utr gol FlyBase G20124.1 AAGCTGTAGAAAAGGTAATGGTAAATGCAATAAATATAGCAAGATCACCGACTGTGTTGCTAGTCACCCATAGACGGCTACACAAATCGCAGCCAGCGCATATTGTGAATCAATGACTGCTGTAATATCACAGGTGCCAAAGTATTTGCTTTTAGTTT 63 25074114 0.814913105 23 62 377 0.978947368 1.968482949 0.189473684 0.428571429 0.621052632 63 2 0 93 2R:25074012-25074169 7 20 1916 FBgn0004919 407.4766667 15.40666667 23.45 0.049082565 1.298139334 0.852878465 3 4 3.5 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2R 25074280 25074285 - 2R_25074280_25074285_- 1 1 1 0 gol FBtr0300178|FBtr0306330 25073667|25072625 25074917|25074917 2R - 25074248 25074300 3'utr gol FlyBase G26609.1 ATGATTATGTTCTATAAGACTAACAATTGTCGATAAAAGTATGCAAAGGAAAT 405 25074274 0.747427903 9 401 1961 0.992945326 2.449478399 0.074074074 0.254320988 0.467372134 405 3 1 563 2R:25074248-25074300 6 gol FBtr0300178|FBtr0306330 25073667|25072625 25074917|25074917 AAGACT 6mer3-8 dme-miR-14-3p 2R - 25074237 25074298 3'utr gol FlyBase G20125.1 GATTATGTTCTATAAGACTAACAATTGTCGATAAAAGTATGCAAAGGAAATTACTTCCGAGT 262 25074274 0.754158167 7 261 1277 0.997752809 2.64738297 0.083146067 0.393129771 0.642696629 262 1 0 444 2R:25074237-25074298 6 325 1917 FBgn0004919 407.4766667 15.40666667 23.45 0.797591682 21.09476417 13.85927505 -11 -11 -11 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 25074446 25074453 - 2R_25074446_25074453_- 0.500120318 0.500120318 0.500120318 0 gol FBtr0300178|FBtr0306330 25073667|25072625 25074917|25074917 2R - 25074421 25074480 3'utr gol FlyBase G26609.3 GTGTAAATAAACTCATTTAAGAGCAGTGTACTTAAAAAAGCTGATACAAAGACTTCCATT 379 25074454 0.887832611 12 373 1733 0.984581498 2.650307523 0.085903084 0.166226913 0.303964758 379 7 0 447 2R:25074421-25074480 8 gol FBtr0300178|FBtr0306330 25073667|25072625 25074917|25074917 GTACTTAA 8mer-A1 dme-miR-252-5p 2R - 25074423 25074480 3'utr gol FlyBase G20126.1 GTGTAAATAAACTCATTTAAGAGCAGTGTACTTAAAAAAGCTGATACAAAGACTTCCA 273 25074454 0.880422527 9 267 1120 0.990049751 2.599883072 0.07960199 0.380952381 0.57960199 273 4 0 398 2R:25074423-25074480 8 318.5 1918 FBgn0004919 407.4766667 15.40666667 23.45 0.781639848 20.67286889 13.58208955 1 1 1 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 2R 25074572 25074577 - 2R_25074572_25074577_- 1 1 1 0 gol FBtr0300178|FBtr0306330 25073667|25072625 25074917|25074917 2R - 25074532 25074900 3'utr gol FlyBase G26610.1 ACGAACAAGGCTTAGGTACAAAGTACAGCCTACTCTGTACATAAAAACTCGTGTATTCAATAGTCAGCTATACCACCAGACCAATATTCATATTCCTTTAGTAAGACCCTTGCATCGGAATTTGTATAGTTAAACTGGCGCAAACCCGTCCGTTGAGTCCAATGTTATATTCAGCCTAATTGTATTTTTTATTATTTTGAAATGTAAGTCTGTAAGTAGTCAATATGCATTTTGGTACAGATTAGGTTCACAGGTTATGCGAATGTGCAGCCTATATTTTTCAATGCCCTTACAAATGGACGTAGTGTAGCAAGTTCAAGCAGTTGACTGAAGTTTAACGTATTCCTCGTTTTACTTAATTATAAGTTA 496 25074577 0.836817795 62 469 3530 0.946577629 1.799340549 0.076794658 0.165322581 0.30884808 496 24 8 567 2R:25074532-25074900 6 gol FBtr0300178|FBtr0306330 25073667|25072625 25074917|25074917 TTGACT 6mer3-8 dme-miR-1012-3p 2R - 25074549 25074773 3'utr gol FlyBase G20127.1 AGTTAAACTGGCGCAAACCCGTCCGTTGAGTCCAATGTTATATTCAGCCTAATTGTATTTTTTATTATTTTGAAATGTAAGTCTGTAAGTAGTCAATATGCATTTTGGTACAGATTAGGTTCACAGGTTATGCGAATGTGCAGCCTATATTTTTCAATGCCCTTACAAATGGACGTAGTGTAGCAAGTTCAAGCAGTTGACTGAAGTTTAACGTATTCCTCGTTT 306 25074577 0.839968223 36 287 2128 0.941422594 1.698970004 0.10251046 0.388888889 0.608786611 306 20 8 450 2R:25074549-25074773 6 114.5 1919 FBgn0004919 407.4766667 15.40666667 23.45 0.280997685 7.431847685 4.882729211 0 0 0 0.01 dme-miR-34-5p 6mer2-7 ACTGCC 2R 3900374 3900379 - 2R_3900374_3900379_- 1 1 1 0 uex FBtr0302226 3900283 3900785 2R - 3900355 3900412 3'utr uex FlyBase G19352.1 TTAGAAGGGCTAAACTCGATGTTAAAAAAATAAACTGCCTGTTTAACTGTATTCCTTA 21 3900371 0.928757019 9 17 173 0.869565217 1 0.043478261 0.095238095 0.173913043 21 2 1 20 2R:3900355-3900412 6 uex FBtr0302226 3900283 3900785 ACTGCC 6mer2-7 dme-miR-34-5p 2R - 3900327 3900436 3'utr uex FlyBase G14709.1 AGTTAATCTTCCTTAGAAATGGTTTTAGAAGGGCTAAACTCGATGTTAAAAAAATAAACTGCCTGTTTAACTGTATTCCTTATTAAACTTAAATGTGTTTGTGAACACAG 20 3900372 0.850428671 11 17 157 1 1.505149978 0.09375 0.5 0.6875 20 0 0 32 2R:3900327-3900436 6 11.5 1920 FBgn0262124 3391.336667 116.7833333 178.7433333 0.003390993 0.098472956 0.064338064 -8 -7 -7.5 0.01 dme-miR-79-3p 7mer-m8 TAGCTTT 2R 3900593 3900599 - 2R_3900593_3900599_- 0.620204031 0.620204031 0.620204031 0 uex FBtr0302226 3900283 3900785 2R - 3900577 3900671 3'utr uex FlyBase G19353.1 ACAATTTTTATACTATACCATAGGTTTTCCCATATTAATTATATTCCTAAACATCTTAAACATAAAAAAAAATAGCTTTTCCAAAACTGTGTATG 17 3900599 0.983686956 7 13 101 0.833333333 0.875061263 0 0.058823529 0.111111111 17 2 1 15 2R:3900577-3900671 7 uex FBtr0302226 3900283 3900785 TAGCTTT 7mer-m8 dme-miR-79-3p 2R - 3900565 3900608 3'utr uex FlyBase G14711.1 AAAAAAAAATAGCTTTTCCAAAACTGTGTATGAATTTATATATA 7 3900594 0.981558222 3 6 46 0.888888889 0.903089987 0 0.285714286 0.444444444 7 1 0 8 2R:3900565-3900608 7 9 1921 FBgn0262124 3391.336667 116.7833333 178.7433333 0.002653821 0.077065791 0.050351528 0 -5 -2.5 0.01 dme-miR-33-5p 6mer2-7 AATGCA 2R 3900774 3900779 - 2R_3900774_3900779_- 1 1 1 0 uex FBtr0302226 3900283 3900785 2R - 3900757 3900803 stop_codon uex FlyBase G19354.1 AAGCAAAGTAAGCCCTAAACACAAAATGCAGGCCACATTTATATATA 47 3900777 0.993770549 2 44 124 0.979166667 1.672097858 0.0625 0.043478261 0.083333333 46 1 0 47 2R:3900757-3900803 6 uex FBtr0302226 3900283 3900785 AATGCA 6mer2-7 dme-miR-33-5p 2R - 3900739 3900804 stop_codon uex FlyBase G14712.1 CAAGCAAAGTAAGCCCTAAACACAAAATGCAGGCCACATTTATATATATGCAGTTAATAAAATAAT 14 3900777 0.999498379 3 14 60 1 1.278753601 0 0.214285714 0.421052632 14 0 0 19 2R:3900739-3900804 6 27 1922 FBgn0262124 3391.336667 116.7833333 178.7433333 0.007961463 0.231197374 0.151054585 -2 -2 -2 0.01 dme-miR-8-3p 6mer2-7 AGTATT 2R 4187554 4187559 - 2R_4187554_4187559_- 1 1 1 0 CG40127 FBtr0111266|FBtr0334986 4187488|4186833 4187593|4187593 2R - 4187534 4187574 3'utr CG40127 FlyBase G19378.1 CAACTACTTAAAACTAGTATTGAAATTTTCCCTTCGATATA 6 4187559 0.777502266 3 5 46 1 0.903089987 0 0.166666667 0.375 6 0 0 8 2R:4187534-4187574 6 CG40127 FBtr0334986|FBtr0111266 4186833|4187488 4187593|4187593 AGTATT 6mer2-7 dme-miR-8-3p 2R - 4187513 4187556 3'utr CG40127 FlyBase G14729.1 ATTGAAATTTTCCCTTCGATATATTTGTTAGAGGTGTTTTCCTT 5 4187547 0.989007054 3 5 53 1 0.954242509 0 0.4 0.666666667 5 0 0 9 2R:4187513-4187556 3 4.5 1923 FBgn0262116 335.1266667 87.01666667 132.72 0.013427759 0.051714231 0.033905967 0 -12 -6 0.01 dme-miR-305-5p 6mer3-8 AGTACA 2R 4564541 4564546 + 2R_4564541_4564546_+ 1 1 1 0 Stlk FBtr0111111|FBtr0308810 4564500|4564500 4565281|4564987 2R + 4564514 4564553 3'utr Stlk FlyBase G12823.1 TGTTTTTCTGATCACTTCGGTGCCTTTAGTACAGAATCTA 19 4564539 0.599846623 7 19 150 1 1.431363764 0.407407407 0.315789474 0.518518519 19 0 0 27 2R:4564514-4564553 6 Stlk FBtr0111111|FBtr0308810 4564500|4564500 4565281|4564987 AGTACA 6mer3-8 dme-miR-305-5p 2R + 4564519 4564555 3'utr Stlk FlyBase G9785.1 TTCTGATCACTTCGGTGCCTTTAGTACAGAATCTACA 13 4564540 0.626645518 5 12 104 0.954545455 1.322219295 0 0.461538462 0.681818182 13 1 0 21 2R:4564519-4564555 6 14.5 1924 FBgn0046692 309.34 20.17666667 30.87 0.04687399 0.718651908 0.469711694 2 1 1.5 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA 2R 4564607 4564612 + 2R_4564607_4564612_+ 1 1 1 0 Stlk FBtr0111111|FBtr0308810 4564500|4564500 4565281|4564987 2R + 4564578 4564629 3'utr Stlk FlyBase G12824.1 ATTTATTTAGGGGTTTAGAACAGCTGACTGTGCAAAAATTAAATTTATGTAT 388 4564602 0.92797494 9 380 2315 0.982142857 2.166331422 0.011160714 0.134020619 0.25 388 6 2 440 2R:4564578-4564629 6 Stlk FBtr0111111|FBtr0308810 4564500|4564500 4565281|4564987 GTGCAA 6mer3-8 dme-miR-92b-3p 2R + 4564565 4564628 3'utr Stlk FlyBase G9786.1 ATTCTTGCTTTCTATTTATTTAGGGGTTTAGAACAGCTGACTGTGCAAAAATTAAATTTATGTA 221 4564602 0.95032688 6 212 1191 0.967065868 2.208172527 0.020958084 0.393665158 0.598802395 221 10 1 323 2R:4564565-4564628 6 301 1925 FBgn0046692 309.34 20.17666667 30.87 0.973039374 14.91822237 9.750566893 5 5 5 0.01 dme-miR-283-5p 7mer-m8 TGATATT 2R 4673393 4673399 + 2R_4673393_4673399_+ 0.620203677 0.620203677 0.620203677 0 CG17883 FBtr0111292 4673085 4673639 2R + 4673320 4673409 3'utr CG17883 FlyBase G12880.1 CGTCAACCGGCCACATCGAATAGAATTCCTATCATAACGAAATGGCTTCCAAATATTTTAACAGCAAAGCCGGTGATATTGACAACAGCA 34 4673398 0.941976783 6 33 135 0.975609756 1.301029996 0.195121951 0.176470588 0.317073171 34 0 1 40 2R:4673320-4673409 7 CG17883 FBtr0111292 4673085 4673639 TGATATT 7mer-m8 dme-miR-283-5p 2R + 4673332 4673409 3'utr CG17883 FlyBase G9826.1 ACATCGAATAGAATTCCTATCATAACGAAATGGCTTCCAAATATTTTAACAGCAAAGCCGGTGATATTGACAACAGCA 20 4673398 0.944382007 5 20 83 1 1.462397998 0.206896552 0.35 0.551724138 20 0 0 29 2R:4673332-4673409 7 23 1926 FBgn0040005 878.32 65.69666667 100.4666667 0.026186356 0.350093866 0.228931652 -5 -5 -5 0.01 dme-miR-8-3p 7mer-m8 CAGTATT 2R 4673452 4673458 + 2R_4673452_4673458_+ 0.661615243 0.661615243 0.661615243 0 CG17883 FBtr0111292 4673085 4673639 2R + 4673415 4673474 3'utr CG17883 FlyBase G12881.1 TATTGTAGTGGGTGTATGTGCCTATTATTACAATAACCAGTATTTGGCGGCAGGTATAAG 20 4673459 0.971812836 5 20 123 1 1.361727836 0.434782609 0.1 0.217391304 20 0 0 23 2R:4673415-4673474 7 CG17883 FBtr0111292 4673085 4673639 CAGTATT 7mer-m8 dme-miR-8-3p 2R + 4673416 4673478 stop_codon CG17883 FlyBase G9827.1 ATTGTAGTGGGTGTATGTGCCTATTATTACAATAACCAGTATTTGGCGGCAGGTATAAGCTGA 13 4673459 0.976439895 4 13 88 1 1.397940009 0.32 0.384615385 0.68 13 0 0 25 2R:4673416-4673478 7 15.5 1927 FBgn0040005 878.32 65.69666667 100.4666667 0.017647327 0.235932823 0.154280027 -7 -7 -7 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT 2R 4673515 4673520 + 2R_4673515_4673520_+ 1 1 1 0 CG17883 FBtr0111291|FBtr0334995|FBtr0111292|FBtr0334996 4673477|4673477|4673085|4673477 4673639|4673639|4673639|4673639 2R + 4673497 4673583 3'utr CG17883 FlyBase G12882.1 ATATCGACATTTAAATTTGTTCCTTATACCGCGGTATAATCACATTCTCCCGAAATTCTGTGTTTTGGTGAAGACCTTATTTTAATA 26 4673514 0.747296779 11 23 240 0.941176471 1.505149978 0.147058824 0.192307692 0.382352941 26 2 0 32 2R:4673497-4673583 6 CG17883 FBtr0334996|FBtr0111292|FBtr0334995|FBtr0111291 4673477|4673085|4673477|4673477 4673639|4673639|4673639|4673639 GTTCCT 6mer2-7 dme-miR-276a-3p 2R + 4673505 4673533 3'utr CG17883 FlyBase G9828.1 ATTTAAATTTGTTCCTTATACCGCGGTAT 7 4673521 0.708839233 4 6 65 0.9 0.954242509 0.2 0.428571429 0.6 7 1 0 9 2R:4673505-4673533 6 9 1928 FBgn0040005 878.32 65.69666667 100.4666667 0.010246835 0.136993252 0.089581951 1 -6 -2.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 2R 4817380 4817385 - 2R_4817380_4817385_- 1 1 1 0 CG17528 FBtr0111277 4815424 4817448 2R - 4817356 4817429 3'utr CG17528 FlyBase G19500.1 AAAAAAAGCAACTTTCACTCTTAAACGACGAACTTTTGTATTTCTGATCTAAAAATGCTTTTATATTAGCCCTA 38 4817386 0.863462485 11 37 295 1 1.591064607 0.128205128 0.054054054 0.102564103 37 0 0 39 2R:4817356-4817429 6 CG17528 FBtr0111277|FBtr0111274 4815424|4817259 4817448|4817448 TGATCT 6mer3-8 dme-bantam-3p 2R - 4817349 4817428 3'utr CG17528 FlyBase G14816.1 AAAAAAGCAACTTTCACTCTTAAACGACGAACTTTTGTATTTCTGATCTAAAAATGCTTTTATATTAGCCCTAATTTATT 26 4817386 0.984012037 10 24 207 0.976190476 1.311753861 0.119047619 0.423076923 0.642857143 26 0 1 41 2R:4817349-4817428 6 18 1929 FBgn0261387 730.0966667 30.65666667 47.04333333 0.02465427 0.587147983 0.382625948 1 1 1 0.01 dme-miR-31a-5p 6mer3-8 TCTTGC 2R 5117430 5117435 - 2R_5117430_5117435_- 0.978946648 0.870668969 0.924807808 0.076563825 gus FBtr0309850|FBtr0309846|FBtr0309848|FBtr0309851 5117211|5117211|5116988|5117211 5117662|5117662|5117662|5117662 2R - 5117356 5117628 NoAnnotation G19516.1 TTTTTGCTGCATGTGATGAAAGCAGCAAATACTAATTGTGTTAGATTATAATAGTATTAGATCAATGTTTGTCTGTCCTCCAACAGGAAAATCATAGGTATACAATTCGTAATAATACTTTACTTAAGCTATAAAGATTGATTGTATATTAAGAAGCATTCAAATAATAGTATGTACACGGAATGACATCTCATCTTGCAATAAATTGGAGAATCGAGTTTCTTCATGTAACATTATTTAAAAACTATACTCACTTCGTGTTATATAAAAAGC 279 5117445 0.969244809 47 268 2013 0.964285714 1.846337112 0.090659341 0.222222222 0.403846154 279 9 4 351 2R:5117356-5117628 6 gus FBtr0309846|FBtr0309852|FBtr0309849|FBtr0309850|FBtr0309847|FBtr0309848|FBtr0309851 5117211|5117330|5117330|5117211|5117392|5116988|5117211 5117662|5117662|5117662|5117662|5117662|5117662|5117662 TCTTGC 6mer3-8 dme-miR-31a-5p 2R - 5117401 5117629 3'utr gus FlyBase G14831.1 ATTTTTGCTGCATGTGATGAAAGCAGCAAATACTAATTGTGTTAGATTATAATAGTATTAGATCAATGTTTGTCTGTCCTCCAACAGGAAAATCATAGGTATACAATTCGTAATAATACTTTACTTAAGCTATAAAGATTGATTGTATATTAAGAAGCATTCAAATAATAGTATGTACACGGAATGACATCTCATCTTGCAATAAATTGGAGAATCGAGTTTCTTCATG 177 5117445 0.982343248 37 170 1275 0.960784314 2.389166084 0.094117647 0.299435028 0.51372549 177 10 0 245 2R:5117401-5117629 6 98.5 1930 FBgn0026238 600.2866667 48.80333333 74.76 0.164088269 2.018304761 1.317549492 10 10 10 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 2R 5154168 5154173 + 2R_5154168_5154173_+ 1 0.998953415 0.999476707 0.000740058 Atf6 FBtr0086080|FBtr0086079 5154029|5154029 5154756|5154756 2R + 5154074 5154173 3'utr Atf6 FlyBase G12956.2 AGGTATAAGGAAGCTTTACCGACCTTTGAAAGTGTACATATTCTTATACCCGTTACTAGTAAAGTAAAAGGGTATACTAGACTTGTTGAAAAGTATGTGA 16 5154151 0.830552462 9 14 99 0.9 1.255272505 0.6 0.1875 0.35 16 2 0 18 2R:5154074-5154173 6 Atf6 FBtr0086079|FBtr0086081|FBtr0086080 5154029|5154029|5154029 5154756|5154194|5154756 ATGTGA 6mer3-8 dme-miR-1003-3p 2R + 5154135 5154172 3'utr Atf6 FlyBase G9886.1 AAGTAAAAGGGTATACTAGACTTGTTGAAAAGTATGTG 7 5154151 0.956752588 3 7 47 1 1.079181246 0.75 0.285714286 0.583333333 7 0 0 12 2R:5154135-5154172 5 1.5 1931 FBgn0033010 930.9533333 36.95333333 56.66 0.001611252 0.040591737 0.026473703 17 17 17 0.01 dme-miR-1003-3p 8mer-A1 ATGTGAGA 2R 5154671 5154678 + 2R_5154671_5154678_+ 0.643565845 0.643565845 0.643565845 0 Atf6 FBtr0086080|FBtr0086079 5154029|5154029 5154756|5154756 2R + 5154646 5154696 3'utr Atf6 FlyBase G12959.1 TAAGTTTTATTAATTAAAACAGCCTATGTGAGAGATGTAGTTTTGTAAAAT 11 5154671 0.976339266 4 11 78 1 1.113943352 0.230769231 0.181818182 0.307692308 11 0 0 13 2R:5154646-5154696 8 Atf6 FBtr0086079|FBtr0086080 5154029|5154029 5154756|5154756 ATGTGAGA 8mer-A1 dme-miR-1003-3p 2R + 5154656 5154696 3'utr Atf6 FlyBase G9888.1 TAATTAAAACAGCCTATGTGAGAGATGTAGTTTTGTAAAAT 8 5154673 0.986396505 4 7 54 0.916666667 1.041392685 0.25 0.375 0.583333333 8 1 0 11 2R:5154656-5154696 8 9.5 1932 FBgn0033010 930.9533333 36.95333333 56.66 0.010204593 0.257081003 0.167666784 0 -2 -1 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 2R 5295929 5295934 + 2R_5295929_5295934_+ 1 1 1 0 d4 FBtr0086082|FBtr0335258|FBtr0086083|FBtr0111115 5295893|5295893|5295893|5295893 5295965|5295965|5295965|5295965 2R + 5295925 5295954 3'utr d4 FlyBase G12979.1 TATAAGTTAATCTTCTCATAAATATAAAAA 14 5295932 0.829688727 6 11 112 0.785714286 0.740362689 0 0 0 14 2 1 11 2R:5295925-5295954 6 d4 FBtr0086083|FBtr0111115|FBtr0086082|FBtr0335258 5295893|5295893|5295893|5295893 5295965|5295965|5295965|5295965 AGTTAA 6mer3-8 dme-miR-999-3p 2R + 5295917 5295956 3'utr d4 FlyBase G9903.1 TCACCAATTATAAGTTAATCTTCTCATAAATATAAAAAAC 14 5295932 0.706228405 5 13 122 0.882352941 1.176091259 0.058823529 0.214285714 0.352941176 14 2 0 15 2R:5295917-5295956 6 14 1933 FBgn0033015 779.7666667 52.91333333 81.00666667 0.017954089 0.264583596 0.172825282 -3 -3 -3 0.01 dme-miR-34-5p 8mer-A1 CACTGCCA 2R 5447156 5447163 + 2R_5447156_5447163_+ 0.678407974 0.678407974 0.678407974 0 laccase2 FBtr0299918|FBtr0301063 5446975|5446975 5447974|5447298 2R + 5447113 5447171 3'utr laccase2 FlyBase G13033.1 ATTTAAAACGCACAATGCACTGTTTTTATTTAATAATTTTAAACACTGCCAATGTCCAA 17 5447150 0.981495538 9 16 121 1 1.230448921 0.058823529 0 0 17 0 0 17 2R:5447113-5447171 8 laccase2 FBtr0301063|FBtr0299918 5446975|5446975 5447298|5447974 CACTGCCA 8mer-A1 dme-miR-34-5p 2R + 5447114 5447168 3'utr laccase2 FlyBase G9945.1 TTTAAAACGCACAATGCACTGTTTTTATTTAATAATTTTAAACACTGCCAATGTC 8 5447142 0.983091335 8 8 63 1 1.176091259 0.2 0.5 0.733333333 8 0 0 15 2R:5447114-5447168 8 9 1934 FBgn0259247 554.2366667 21.22 32.31 0.01623855 0.424128181 0.278551532 6 14 10 0.01 dme-miR-276a-3p 6mer3-8 AGTTCC 2R 5609670 5609675 + 2R_5609670_5609675_+ 1 1 1 0 CG17508 FBtr0307172 5609514 5609994 2R + 5609632 5609738 3'utr CG17508 FlyBase G13043.1 CTGCATATATCAGGAACTCATTCTAAGGATTGGCTTTCAGTTCCCAGGAACCCTATTATATAGAAATTAGAATTGACCAAAGAATTTATTAAATTGCAAGAAAACCG 49 5609661 0.915205379 17 46 354 0.925925926 1.698970004 0.074074074 0.102040816 0.185185185 49 4 0 50 2R:5609632-5609738 6 CG17508 FBtr0307172 5609514 5609994 AGTTCC 6mer3-8 dme-miR-276a-3p 2R + 5609638 5609724 3'utr CG17508 FlyBase G9956.1 ATATCAGGAACTCATTCTAAGGATTGGCTTTCAGTTCCCAGGAACCCTATTATATAGAAATTAGAATTGACCAAAGAATTTATTAAA 30 5609661 0.877027844 14 30 207 1 1.653212514 0.111111111 0.333333333 0.555555556 30 0 0 45 2R:5609638-5609724 6 15 1935 FBgn0039970 517.7666667 53.29333333 81.50333333 0.028970579 0.281461096 0.184041552 9 9 9 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 2R 5609707 5609714 + 2R_5609707_5609714_+ 0.643565719 0.64356572 0.64356572 0 CG17508 FBtr0307172 5609514 5609994 2R + 5609632 5609738 3'utr CG17508 FlyBase G13043.1 CTGCATATATCAGGAACTCATTCTAAGGATTGGCTTTCAGTTCCCAGGAACCCTATTATATAGAAATTAGAATTGACCAAAGAATTTATTAAATTGCAAGAAAACCG 49 5609704 0.915205379 17 46 354 0.925925926 1.698970004 0.074074074 0.102040816 0.185185185 49 4 0 50 2R:5609632-5609738 8 CG17508 FBtr0307172 5609514 5609994 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 5609638 5609724 3'utr CG17508 FlyBase G9956.1 ATATCAGGAACTCATTCTAAGGATTGGCTTTCAGTTCCCAGGAACCCTATTATATAGAAATTAGAATTGACCAAAGAATTTATTAAA 30 5609704 0.877027844 14 30 207 1 1.653212514 0.111111111 0.333333333 0.555555556 30 0 0 45 2R:5609638-5609724 8 18 1936 FBgn0039970 517.7666667 53.29333333 81.50333333 0.034764695 0.337753315 0.220849863 3 3 3 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 2R 5609762 5609767 + 2R_5609762_5609767_+ 1 1 1 0 CG17508 FBtr0307172 5609514 5609994 2R + 5609751 5609793 3'utr CG17508 FlyBase G13044.1 AAATAGACAATTGTGTTTGGAGTGGGCATGCCCAACGTATTTT 10 5609761 0.761410487 7 10 61 1 1.041392685 0.181818182 0.1 0.181818182 10 0 0 11 2R:5609751-5609793 6 CG17508 FBtr0307172 5609514 5609994 TGTGTT 6mer3-8 dme-miR-317-3p 2R + 5609734 5609777 3'utr CG17508 FlyBase G9957.1 AACCGAAACAAAGTGTGAAATAGACAATTGTGTTTGGAGTGGGC 5 5609754 0.962587751 3 5 27 1 0.903089987 0 0.2 0.5 5 0 0 8 2R:5609734-5609777 6 5.5 1937 FBgn0039970 517.7666667 53.29333333 81.50333333 0.010622546 0.103202402 0.067481903 1 8 4.5 0.01 dme-miR-304-5p 6mer2-7 GAGATT 2R 5609875 5609880 + 2R_5609875_5609880_+ 1 1 1 0 CG17508 FBtr0307172 5609514 5609994 2R + 5609797 5609895 3'utr CG17508 FlyBase G13045.1 AATACCATCTTTTTAGCTTTTTGAGGTATAAATATTTGGACTTTCATACGGACGGACATGAACAGATCGATCCTGATAGAGATTCAAGTCTAAAACACT 97 5609880 0.796595566 7 95 534 0.981981982 1.736396502 0.027027027 0.12371134 0.234234234 97 1 1 109 2R:5609797-5609895 6 CG17508 FBtr0307172 5609514 5609994 GAGATT 6mer2-7 dme-miR-304-5p 2R + 5609819 5609894 3'utr CG17508 FlyBase G9958.1 GAGGTATAAATATTTGGACTTTCATACGGACGGACATGAACAGATCGATCCTGATAGAGATTCAAGTCTAAAACAC 41 5609880 0.762003628 8 40 216 0.969230769 1.799340549 0.061538462 0.512195122 0.692307692 41 2 0 63 2R:5609819-5609894 6 61.5 1938 FBgn0039970 517.7666667 53.29333333 81.50333333 0.118779373 1.153990493 0.754570365 -5 -5 -5 0.01 dme-miR-968-5p 6mer3-8 ACTACT 2R 5611502 5611507 + 2R_5611502_5611507_+ 1 1 1 0 CG17508 FBtr0086071 5611404 5611586 2R + 5611480 5611522 3'utr CG17508 FlyBase G13049.1 TGTTTATTTGTAGGAAAAGCGTACTACTACCATCTAGGCAGAT 19 5611507 0.736771137 5 19 104 1 1.301029996 0.25 0.052631579 0.1 19 0 0 20 2R:5611480-5611522 6 CG17508 FBtr0086071 5611404 5611586 ACTACT 6mer3-8 dme-miR-968-5p 2R + 5611482 5611520 3'utr CG17508 FlyBase G9963.1 TTTATTTGTAGGAAAAGCGTACTACTACCATCTAGGCAG 8 5611507 0.967638005 2 7 40 0.846153846 1.041392685 0.769230769 0.5 0.692307692 8 2 0 11 2R:5611482-5611520 6 13.5 1939 FBgn0039970 517.7666667 53.29333333 81.50333333 0.026073521 0.253314986 0.165637397 -5 -5 -5 0.01 dme-miR-2b-2-5p 6mer2-7 TGAAGA 2R 5641928 5641933 - 2R_5641928_5641933_- 1 1 1 0 CG11665 FBtr0345359|FBtr0086072 5640913|5641671 5642010|5642010 2R - 5641879 5641935 3'utr CG11665 FlyBase G19630.1 GATGAAGATAGCAGCCAGGACTAAAAGACCATTAACATTTTTTGTAACCTTTGATTC 6 5641927 0.982355838 4 5 40 0.833333333 0.698970004 0.333333333 0 0 6 1 0 5 2R:5641879-5641935 6 CG11665 FBtr0086072|FBtr0345359 5641671|5640913 5642010|5642010 TGAAGA 6mer2-7 dme-miR-2b-2-5p 2R - 5641907 5642004 3'utr CG11665 FlyBase G14916.1 AAACAACTCTCGTACCAAACCACGTACAATAACAATTAGATTTAAGGCTTAAAACGGCGTACAAACAGTGATGAAGATAGCAGCCAGGACTAAAAGAC 16 5641927 0.995509404 5 14 63 0.923076923 1.380211242 0.346153846 0.4375 0.653846154 16 2 0 24 2R:5641907-5642004 6 3.5 1940 FBgn0033028 1073.073333 45.70666667 69.74666667 0.00326166 0.076575263 0.05018161 -6 -6 -6 0.01 dme-miR-14-3p 6mer2-7 AGACTG 2R 5656095 5656100 + 2R_5656095_5656100_+ 1 1 1 0 CG1344 FBtr0331967 5655809 5656778 2R + 5656046 5656228 3'utr CG1344 FlyBase G13063.1 TTCTCGTTCGCACTCCCACCAGCTGATTGTAATGGGTAGTCGGAGAACTAGACTGTAAAGTTTTCTCTTGTTTGTTCCTTTTTTTGTCCTAACAAATAAATGCTTGCTTACTTTTGTATTATAAAAAATCGACACCTCGGTATTTTTGTTTTTGATTAAGACTTAGTAATAGAATTGTAATCG 107 5656094 0.890763443 19 99 787 0.929133858 1.594760753 0.220472441 0.177570093 0.307086614 107 7 2 118 2R:5656046-5656228 6 CG1344 FBtr0331967 5655809 5656778 AGACTG 6mer2-7 dme-miR-14-3p 2R + 5656075 5656117 3'utr CG1344 FlyBase G9977.1 TAATGGGTAGTCGGAGAACTAGACTGTAAAGTTTTCTCTTGTT 22 5656101 0.766819584 4 21 134 1 1.477121255 0.1 0.227272727 0.433333333 22 0 0 30 2R:5656075-5656117 6 41 1941 FBgn0027507 843.1966667 42.83333333 65.52 0.048624481 0.957198444 0.625763126 1 -6 -2.5 0.01 dme-miR-31a-5p 6mer2-7 CTTGCC 2R 5656452 5656457 + 2R_5656452_5656457_+ 1 1 1 0 CG1344 FBtr0331967 5655809 5656778 2R + 5656409 5656475 3'utr CG1344 FlyBase G13064.1 CTATTCAATCGTCTTTATTCTGTGTTCATACATTTAAACAAGACTTGCCCTCCAAAAGCCTTGGAAA 16 5656454 0.902491671 5 15 87 0.954545455 1.322219295 0.181818182 0.25 0.454545455 16 1 0 21 2R:5656409-5656475 6 CG1344 FBtr0331967 5655809 5656778 CTTGCC 6mer2-7 dme-miR-31a-5p 2R + 5656404 5656489 3'utr CG1344 FlyBase G9979.1 TTCAACTATTCAATCGTCTTTATTCTGTGTTCATACATTTAAACAAGACTTGCCCTCCAAAAGCCTTGGAAATTTTACGTAACAAA 18 5656454 0.959291136 5 16 95 0.925925926 0.920818754 0.185185185 0.5 0.666666667 18 0 2 25 2R:5656404-5656489 6 12 1942 FBgn0027507 843.1966667 42.83333333 65.52 0.014231555 0.280155642 0.183150183 -2 -2 -2 0.01 dme-miR-308-3p 8mer-m1 CTGTGATT 2R 5656725 5656732 + 2R_5656725_5656732_+ 0.385560641 0.385560641 0.385560641 0 CG1344 FBtr0331967 5655809 5656778 2R + 5656694 5656737 3'utr CG1344 FlyBase G13066.1 CAGGTTATATGAGATTGTTTTTGAAAGCCCTCTGTGATTTCTTA 13 5656732 0.803696331 3 13 109 1 1.255272505 0.111111111 0.307692308 0.5 13 0 0 18 2R:5656694-5656737 8 CG1344 FBtr0331967 5655809 5656778 CTGTGATT 8mer-m1 dme-miR-308-3p 2R + 5656715 5656736 3'utr CG1344 FlyBase G9980.1 TGAAAGCCCTCTGTGATTTCTT 6 5656732 0.611158745 2 6 43 1 0.903089987 0 0.166666667 0.375 6 0 0 8 2R:5656715-5656736 8 7.5 1943 FBgn0027507 843.1966667 42.83333333 65.52 0.008894722 0.175097276 0.114468864 -7 -7 -7 0.01 dme-miR-283-5p 7mer-A1 GATATTA 2R 5677561 5677567 - 2R_5677561_5677567_- 0.782911824 0.782911824 0.782911824 0 scaf FBtr0086061|FBtr0086060 5676748|5676748 5677716|5677716 2R - 5677559 5677606 3'utr scaf FlyBase G19676.1 ATTGCAATTTCGTTGGAGCTCAAAATGGAGGGCATTCCCGATATTATC 10 5677572 0.730026474 6 10 64 1 1.113943352 0 0.2 0.384615385 10 0 0 13 2R:5677559-5677606 7 scaf FBtr0086061|FBtr0086060 5676748|5676748 5677716|5677716 GATATTA 7mer-A1 dme-miR-283-5p 2R - 5677559 5677590 3'utr scaf FlyBase G14949.1 AGCTCAAAATGGAGGGCATTCCCGATATTATC 5 5677581 0.856020247 4 5 27 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2R:5677559-5677590 7 4.5 1944 FBgn0033033 687.87 27.26 41.96666667 0.006541934 0.165077036 0.107227959 5 14 9.5 0.01 dme-miR-995-5p 8mer-A1 AATTCGGA 2R 5677699 5677706 - 2R_5677699_5677706_- 0.612214296 0.612214296 0.612214296 0 scaf FBtr0086061|FBtr0086060 5676748|5676748 5677716|5677716 2R - 5677683 5677743 stop_codon scaf FlyBase G19677.1 AAGCCGCTCCTGTTGAAGCGATTTTGAGATGGACTTTAATTCGGAATACGACCAAGGAGCG 54 5677714 0.880343091 4 52 457 0.965517241 1.748188027 0.482758621 0.074074074 0.137931034 54 2 0 56 2R:5677683-5677743 8 scaf FBtr0086061|FBtr0086060 5676748|5676748 5677716|5677716 AATTCGGA 8mer-A1 dme-miR-995-5p 2R - 5677694 5677733 stop_codon scaf FlyBase G14950.1 TGTTGAAGCGATTTTGAGATGGACTTTAATTCGGAATACG 36 5677714 0.893142558 2 36 316 1 1.681241237 0.416666667 0.194444444 0.395833333 36 0 0 48 2R:5677694-5677733 8 43 1945 FBgn0033033 687.87 27.26 41.96666667 0.062511812 1.577402788 1.024622716 8 8 8 0.01 dme-miR-190-5p 6mer3-8 ACATAT 2R 5704961 5704966 + 2R_5704961_5704966_+ 0.992446523 1 0.996223262 0.005341131 vlc FBtr0307530|FBtr0300503|FBtr0086039|FBtr0086040|FBtr0307531|FBtr0086041|FBtr0307532|FBtr0300502 5704918|5704918|5704918|5704918|5704918|5704918|5704918|5704918 5705439|5705439|5705439|5705439|5705439|5705439|5705439|5705439 2R + 5704905 5705002 stop_codon vlc FlyBase G13102.1 AGCAACGGAAGTTAAATAATGCTCACTGCGAATAGCAACTCATGCTTTCTATTTATACATATATTTTTAACTAACACACGTGTACCCCACAAAGGCAT 30 5704947 0.97739004 10 29 196 1 1.602059991 0.05 0.3 0.475 30 0 0 40 2R:5704905-5705002 6 vlc FBtr0307532|FBtr0300502|FBtr0307531|FBtr0086041|FBtr0086039|FBtr0086040|FBtr0307530|FBtr0300503 5704918|5704918|5704918|5704918|5704918|5704918|5704918|5704918 5705439|5705439|5705439|5705439|5705439|5705439|5705439|5705439 ACATAT 6mer3-8 dme-miR-190-5p 2R + 5704800 5705017 stop_codon vlc FlyBase G10014.1 CGTCGCGAGGCTATGACCGCAGCGGCCAAATTGAATCCCATAAATGTTGATGCCGACCCGGACGTGCCGGGAATAATTGGCGATAGTTGTGCTAATCCTAGCGTTAGCAACGGAAGTTAAATAATGCTCACTGCGAATAGCAACTCATGCTTTCTATTTATACATATATTTTTAACTAACACACGTGTACCCCACAAAGGCATACTTAAATTTATAGA 27 5704985 0.981427546 16 23 169 0.886363636 1.290034611 0.136363636 0.444444444 0.659090909 27 4 1 39 2R:5704800-5705017 6 5 1946 FBgn0259978 569 27.35666667 41.84333333 0.008787346 0.182770805 0.119493348 14 -24 -5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 2R 5705043 5705048 + 2R_5705043_5705048_+ 1 1 1 0 vlc FBtr0307530|FBtr0300503|FBtr0086039|FBtr0086040|FBtr0307531|FBtr0086041|FBtr0307532|FBtr0300502 5704918|5704918|5704918|5704918|5704918|5704918|5704918|5704918 5705439|5705439|5705439|5705439|5705439|5705439|5705439|5705439 2R + 5705019 5705063 3'utr vlc FlyBase G13103.1 ATTTCTAGTTGAATTAATCATTTACTAGTCCCAACTAAAATTATT 18 5705040 0.702970362 6 18 137 1 1.414973348 0 0.277777778 0.5 18 0 0 26 2R:5705019-5705063 6 vlc FBtr0307532|FBtr0300502|FBtr0307531|FBtr0086041|FBtr0086039|FBtr0086040|FBtr0307530|FBtr0300503 5704918|5704918|5704918|5704918|5704918|5704918|5704918|5704918 5705439|5705439|5705439|5705439|5705439|5705439|5705439|5705439 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 2R + 5705033 5705057 3'utr vlc FlyBase G10015.1 TAATCATTTACTAGTCCCAACTAAA 10 5705040 0.639672593 4 9 53 1 1.113943352 0.076923077 0.3 0.461538462 10 0 0 13 2R:5705033-5705057 6 14 1947 FBgn0259978 569 27.35666667 41.84333333 0.024604569 0.511758255 0.334581375 3 3 3 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 5705205 5705210 + 2R_5705205_5705210_+ 1 1 1 0 vlc FBtr0307530|FBtr0300503|FBtr0086039|FBtr0086040|FBtr0307531|FBtr0086041|FBtr0307532|FBtr0300502 5704918|5704918|5704918|5704918|5704918|5704918|5704918|5704918 5705439|5705439|5705439|5705439|5705439|5705439|5705439|5705439 2R + 5705071 5705236 3'utr vlc FlyBase G13104.1 AGCTCCTCACTGAAATCTGTCACAAGGCGTCAAATATCTAGGAGATAACGAAGTATTGTCACCAATTGCGACTTACCTAAAGTTGTTCATAAATATTGCCTTATCCGCGAAAGATTTCGCTAATTAATCAATTTGCTGTGCACATTATGTAATTGAAAATTAAAAT 144 5705203 0.806513121 24 142 1075 0.983783784 1.782950133 0.108108108 0.215277778 0.389189189 144 1 2 182 2R:5705071-5705236 6 vlc FBtr0307532|FBtr0300502|FBtr0307531|FBtr0086041|FBtr0086039|FBtr0086040|FBtr0307530|FBtr0300503 5704918|5704918|5704918|5704918|5704918|5704918|5704918|5704918 5705439|5705439|5705439|5705439|5705439|5705439|5705439|5705439 GCTGTG 6mer2-7 dme-miR-1008-3p 2R + 5705157 5705254 3'utr vlc FlyBase G10017.1 TCATAAATATTGCCTTATCCGCGAAAGATTTCGCTAATTAATCAATTTGCTGTGCACATTATGTAATTGAAAATTAAAATTACTTGATTACATATAAA 62 5705203 0.987724126 10 56 500 0.896226415 1.500602351 0.066037736 0.435483871 0.669811321 62 9 2 95 2R:5705157-5705254 6 79 1948 FBgn0259978 569 27.35666667 41.84333333 0.13884007 2.887778725 1.887994902 2 2 2 0.01 dme-miR-252-5p 7mer-m8 GTACTTA 2R 5706257 5706263 - 2R_5706257_5706263_- 0.588299917 0.588299917 0.588299917 0 ap FBtr0086058|FBtr0086059 5706200|5706200 5707932|5707932 2R - 5706196 5706456 3'utr ap FlyBase G19684.1 TATGTAACTAATATTTATTGCCCAAATTTAATAGTTAGAGACGAATTTAGTTTAGAACAGACTATACAATAAAGTCCATATGTACATGTAGTATTACGGTAAAGTAATAGCTTCGCTCAAGCATACGACCAGGTTCGTAAGCTATTAATACGAAACTGTAATTATAATCAAATCAGTAAACACTGGAAGATTTGTACTTACAAATAGTTAACTCATAAGTCTTACCATAGAAGCTTAAATAAAACGTATTCAAGCAAAAAA 822 5706264 0.770457601 64 783 6073 0.951612903 2.196820744 0.069556452 0.177615572 0.318548387 822 43 5 944 2R:5706196-5706456 7 ap FBtr0086058|FBtr0086059 5706200|5706200 5707932|5707932 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 5706195 5706449 3'utr ap FlyBase G14954.1 CTAATATTTATTGCCCAAATTTAATAGTTAGAGACGAATTTAGTTTAGAACAGACTATACAATAAAGTCCATATGTACATGTAGTATTACGGTAAAGTAATAGCTTCGCTCAAGCATACGACCAGGTTCGTAAGCTATTAATACGAAACTGTAATTATAATCAAATCAGTAAACACTGGAAGATTTGTACTTACAAATAGTTAACTCATAAGTCTTACCATAGAAGCTTAAATAAAACGTATTCAAGCAAAAAAA 615 5706264 0.831704405 58 582 4319 0.950854701 2.04630002 0.071581197 0.356097561 0.576923077 615 39 7 890 2R:5706195-5706449 7 323 1949 FBgn0000099 2 0.113333333 0.183333333 161.5 2850 1761.818182 1 1 1 0.01 dme-miR-2b-2-5p 7mer-A1 TGAAGAA 2R 5706506 5706512 - 2R_5706506_5706512_- 0.823349562 0.823349562 0.823349562 0 ap FBtr0086058|FBtr0086059 5706200|5706200 5707932|5707932 2R - 5706490 5706825 3'utr ap FlyBase G19685.2 AGTCTAGTTTACACGTATGTTCTACGAGGAACGGACCGATTGTTCCTATGAGAGCTATAGGTTTTACCATATGTATATGCATGCATTACTTCAGCTCCATCTCTTTTTGATTCATAAACGTATAATGGTTTGAGAGTAAACATTTTGTGGCGTATATAGTTCAAGTTTACATATTTAGAGTACGGTGCCCAAGACGCGCTTTAAAAATATTGAAAACGGGTTGTTAATGAAGTCCCATATGTATAATTGTCTAGGTACATGGATATTGTTAATATATTATTATTTTTATTTAAAGAGCTCTCAACAATATGTATGAAGAAATCTGCGTATATCAAC 1223 5706512 0.882054457 86 1159 8167 0.95379538 1.56880324 0.238283828 0.188216039 0.345214521 1222 32 38 1445 2R:5706490-5706825 7 ap FBtr0086058|FBtr0086059 5706200|5706200 5707932|5707932 TGAAGAA 7mer-A1 dme-miR-2b-2-5p 2R - 5706490 5706820 3'utr ap FlyBase G14955.2 AGTTTACACGTATGTTCTACGAGGAACGGACCGATTGTTCCTATGAGAGCTATAGGTTTTACCATATGTATATGCATGCATTACTTCAGCTCCATCTCTTTTTGATTCATAAACGTATAATGGTTTGAGAGTAAACATTTTGTGGCGTATATAGTTCAAGTTTACATATTTAGAGTACGGTGCCCAAGACGCGCTTTAAAAATATTGAAAACGGGTTGTTAATGAAGTCCCATATGTATAATTGTCTAGGTACATGGATATTGTTAATATATTATTATTTTTATTTAAAGAGCTCTCAACAATATGTATGAAGAAATCTGCGTATATCAAC 816 5706512 0.881105855 68 768 5229 0.941415785 1.586212104 0.260374288 0.378676471 0.587469487 816 43 29 1157 2R:5706490-5706820 7 517.5 1950 FBgn0000099 2 0.113333333 0.183333333 258.75 4566.176471 2822.727273 0 0 0 0.01 dme-miR-276a-3p 7mer-A1 GTTCCTA 2R 5706778 5706784 - 2R_5706778_5706784_- 0.823349562 0.823349562 0.823349562 0 ap FBtr0086058|FBtr0086059 5706200|5706200 5707932|5707932 2R - 5706490 5706825 3'utr ap FlyBase G19685.2 AGTCTAGTTTACACGTATGTTCTACGAGGAACGGACCGATTGTTCCTATGAGAGCTATAGGTTTTACCATATGTATATGCATGCATTACTTCAGCTCCATCTCTTTTTGATTCATAAACGTATAATGGTTTGAGAGTAAACATTTTGTGGCGTATATAGTTCAAGTTTACATATTTAGAGTACGGTGCCCAAGACGCGCTTTAAAAATATTGAAAACGGGTTGTTAATGAAGTCCCATATGTATAATTGTCTAGGTACATGGATATTGTTAATATATTATTATTTTTATTTAAAGAGCTCTCAACAATATGTATGAAGAAATCTGCGTATATCAAC 1223 5706786 0.882054457 86 1159 8167 0.95379538 1.56880324 0.238283828 0.188216039 0.345214521 1222 32 38 1445 2R:5706490-5706825 7 ap FBtr0086058|FBtr0086059 5706200|5706200 5707932|5707932 GTTCCTA 7mer-A1 dme-miR-276a-3p 2R - 5706490 5706820 3'utr ap FlyBase G14955.2 AGTTTACACGTATGTTCTACGAGGAACGGACCGATTGTTCCTATGAGAGCTATAGGTTTTACCATATGTATATGCATGCATTACTTCAGCTCCATCTCTTTTTGATTCATAAACGTATAATGGTTTGAGAGTAAACATTTTGTGGCGTATATAGTTCAAGTTTACATATTTAGAGTACGGTGCCCAAGACGCGCTTTAAAAATATTGAAAACGGGTTGTTAATGAAGTCCCATATGTATAATTGTCTAGGTACATGGATATTGTTAATATATTATTATTTTTATTTAAAGAGCTCTCAACAATATGTATGAAGAAATCTGCGTATATCAAC 816 5706786 0.881105855 68 768 5229 0.941415785 1.586212104 0.260374288 0.378676471 0.587469487 816 43 29 1157 2R:5706490-5706820 7 192 1951 FBgn0000099 2 0.113333333 0.183333333 96 1694.117647 1047.272727 2 2 2 0.01 dme-miR-79-3p 6mer2-7 AGCTTT 2R 5707062 5707067 - 2R_5707062_5707067_- 1 1 1 0 ap FBtr0086058|FBtr0086059 5706200|5706200 5707932|5707932 2R - 5706973 5707099 3'utr ap FlyBase G19687.1 ATATGAATTGCCCGCTGGCAATGTTTTTACCAAGCTTTCACCTTCCGATTAGGTTTGGTGGTCATTTAAGTAAATTCCGATTTAAACTTTGTTTTTAATACGGGAGCGTGTCACTTCCTTTCGGTAT 36 5707050 0.872122181 21 35 325 0.977272727 1.633468456 0.136363636 0.166666667 0.318181818 36 1 0 43 2R:5706973-5707099 6 ap FBtr0086058|FBtr0086059 5706200|5706200 5707932|5707932 AGCTTT 6mer2-7 dme-miR-79-3p 2R - 5707023 5707122 3'utr ap FlyBase G14959.1 GCGGCCAGGTCATGCCCTTCCTCATATGAATTGCCCGCTGGCAATGTTTTTACCAAGCTTTCACCTTCCGATTAGGTTTGGTGGTCATTTAAGTAAATTC 18 5707043 0.743443547 13 18 137 1 1.491361694 0.193548387 0.444444444 0.677419355 18 0 0 31 2R:5707023-5707122 6 11.5 1952 FBgn0000099 2 0.113333333 0.183333333 5.75 101.4705882 62.72727273 -17 -24 -20.5 0.01 dme-miR-31a-5p 6mer2-7 CTTGCC 2R 5707572 5707577 - 2R_5707572_5707577_- 1 1 1 0 ap FBtr0086058|FBtr0086059|FBtr0300504|FBtr0335274 5706200|5706200|5707222|5707222 5707932|5707932|5707932|5707932 2R - 5707369 5708108 lincRNA_intron-lincRNA_exon ap FlyBase G19690.1 AGGTCTGGTTTCAAAATGCAAGGGCCAAATGGCGCCGCATGATGATGAAGCAGGATGGCAGCGGCCTGCTGGAGAAGGGCGAAGGCGCTCTGGACCTCGACAGCATCTCCGTGCACAGTCCTACGTCGTTTATATTGGGAGGACCGAACAGCACACCGCCACTTAACTTGGACTAACGGATGCTCAGGAAACGCGAAAACAAAATGATAGTGACAAAGGAAATGGGCGCAGCAGTCACCTCCGACATCATACGTTCTTATGCCAGTTGTCTATTCGCGTGCCTCATACACAGTCCCGGACCCGGTTTGACTACTGAATCCGGATACTTGTCTAGATCAAGCACGGCTAGCTCTTGAATGCTATGGGCTGCCTTGTCGGATGGGAATCAATTTGGAAAGCTTGTCTTGTGTTCAAAATCGAAAAATTGATTCATCCACACGTTAAACGCCCGGGAAACGCCTCGGAAAATGCTAAGAAAATATGTATTTTTGTATTTGCCTATTGACCGTTTCCAGCACTACTCGCCTCGTCCTTGCCCCACATGTTGTTTCTATAGTTTTAACGTTCACTTGTAAATATGTACTGTAATCACATAGTTTATTTCAAACGATCCATATTAGCCTGACTCCCCTGTTTTTTGTATTCTTTTAAAGCGCAGAATATCAATTCGAACATTGAAATTATGAATCAAAAGAAGGTGGATTCATGCAAAGATTACCAACTTGTAACGTTCTTTCTAA 3863 5707576 0.969481627 161 3733 24210 0.965273312 2.191103949 0.184994641 0.171369402 0.313826367 3863 134 28 4503 2R:5707369-5708108 6 ap FBtr0300504|FBtr0335274|FBtr0086058|FBtr0086059 5707222|5707222|5706200|5706200 5707932|5707932|5707932|5707932 CTTGCC 6mer2-7 dme-miR-31a-5p 2R - 5707542 5708108 lincRNA_intron-lincRNA_exon ap FlyBase G14963.2 AGGTCTGGTTTCAAAATGCAAGGGCCAAATGGCGCCGCATGATGATGAAGCAGGATGGCAGCGGCCTGCTGGAGAAGGGCGAAGGCGCTCTGGACCTCGACAGCATCTCCGTGCACAGTCCTACGTCGTTTATATTGGGAGGACCGAACAGCACACCGCCACTTAACTTGGACTAACGGATGCTCAGGAAACGCGAAAACAAAATGATAGTGACAAAGGAAATGGGCGCAGCAGTCACCTCCGACATCATACGTTCTTATGCCAGTTGTCTATTCGCGTGCCTCATACACAGTCCCGGACCCGGTTTGACTACTGAATCCGGATACTTGTCTAGATCAAGCACGGCTAGCTCTTGAATGCTATGGGCTGCCTTGTCGGATGGGAATCAATTTGGAAAGCTTGTCTTGTGTTCAAAATCGAAAAATTGATTCATCCACACGTTAAACGCCCGGGAAACGCCTCGGAAAATGCTAAGAAAATATGTATTTTTGTATTTGCCTATTGACCGTTTCCAGCACTACTCGCCTCGTCCTTGCCCCACATGTTGTTTCTATAGTTTTAACGTTC 1911 5707576 0.933621155 110 1810 11250 0.954812004 2.027192738 0.133839255 0.381998953 0.592618144 1911 106 25 2768 2R:5707542-5708108 6 993 1953 FBgn0000099 2 0.113333333 0.183333333 496.5 8761.764706 5416.363636 -1 -1 -1 0.01 dme-miR-1006-3p 6mer2-7 GAATTT 2R 5756052 5756057 + 2R_5756052_5756057_+ 1 0.999937139 0.99996857 4.45E-05 l(2)09851 FBtr0335269 5755985 5756327 2R + 5755967 5756111 stop_codon l(2)09851 FlyBase G13126.1 TTCGCACGATCAGTGTCTGACCTCGCTATTATTCTGTTTCTTAACGTTAAAAAAATTAAACCGATCTTGTGTCTTTGGGTTTTAAGAATTTTTTACTGGACTTATTTAAACACAAAAAGAAAGTGGAACACTATTGACTTTTATG 41 5756036 0.792305763 16 39 366 0.958333333 1.662757832 0.166666667 0.170731707 0.291666667 41 2 0 46 2R:5755967-5756111 6 l(2)09851 FBtr0335269 5755985 5756327 GAATTT 6mer2-7 dme-miR-1006-3p 2R + 5755963 5756074 stop_codon l(2)09851 FlyBase G10038.1 ATCTTTCGCACGATCAGTGTCTGACCTCGCTATTATTCTGTTTCTTAACGTTAAAAAAATTAAACCGATCTTGTGTCTTTGGGTTTTAAGAATTTTTTACTGGACTTATTTA 21 5756063 0.834777422 13 19 185 0.911764706 1.491361694 0.088235294 0.428571429 0.647058824 21 3 0 31 2R:5755963-5756074 6 7 1954 FBgn0022288 410.3333333 32.80666667 50.73333333 0.017059301 0.213371266 0.137976347 16 -11 2.5 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 2R 5756100 5756105 + 2R_5756100_5756105_+ 1 1 1 0 l(2)09851 FBtr0335269 5755985 5756327 2R + 5755967 5756111 stop_codon l(2)09851 FlyBase G13126.1 TTCGCACGATCAGTGTCTGACCTCGCTATTATTCTGTTTCTTAACGTTAAAAAAATTAAACCGATCTTGTGTCTTTGGGTTTTAAGAATTTTTTACTGGACTTATTTAAACACAAAAAGAAAGTGGAACACTATTGACTTTTATG 41 5756107 0.792305763 16 39 366 0.958333333 1.662757832 0.166666667 0.170731707 0.291666667 41 2 0 46 2R:5755967-5756111 6 l(2)09851 FBtr0335269 5755985 5756327 TTGACT 6mer3-8 dme-miR-1012-3p 2R + 5756083 5756111 3'utr l(2)09851 FlyBase G10039.1 AAGAAAGTGGAACACTATTGACTTTTATG 10 5756107 0.561431005 2 10 73 1 1.176091259 0.466666667 0.3 0.533333333 10 0 0 15 2R:5756083-5756111 6 10 1955 FBgn0022288 410.3333333 32.80666667 50.73333333 0.024370431 0.304816094 0.197109067 -7 -7 -7 0.01 dme-miR-14-3p 7mer-m8 AAGACTG 2R 5772217 5772223 + 2R_5772217_5772223_+ 0.671795832 0.671795832 0.671795832 0 Gp210 FBtr0086044|FBtr0335270 5772199|5772199 5772492|5774324 2R + 5772194 5772238 stop_codon Gp210 FlyBase G13157.1 TAGTTAGTTGGATACGTAAATTAAAGACTGTCAGCAAACTGACTC 89 5772224 0.694120598 5 85 438 0.962264151 2.008600172 0.169811321 0.168539326 0.301886792 89 4 0 102 2R:5772194-5772238 7 Gp210 FBtr0335270|FBtr0086044 5772199|5772199 5774324|5772492 AAGACTG 7mer-m8 dme-miR-14-3p 2R + 5772134 5772242 stop_codon Gp210 FlyBase G10060.1 GTATATTTATGGACACCCTCGTTTGAACTCTTCAAACAGATCAGAAAACTCGACTAGCTTTAGTTAGTTGGATACGTAAATTAAAGACTGTCAGCAAACTGACTCGGGT 84 5772215 0.967086338 14 80 436 0.959016393 1.767155866 0.262295082 0.369047619 0.56557377 84 4 1 117 2R:5772134-5772242 7 80.5 1956 FBgn0266580 2948.146667 58.77 90.26 0.02730529 1.369746469 0.891867937 -7 2 -2.5 0.01 dme-miR-980-3p 6mer2-7 GCAGCT 2R 5772292 5772297 + 2R_5772292_5772297_+ 1 1 1 0 Gp210 FBtr0086044|FBtr0335270 5772199|5772199 5772492|5774324 2R + 5772256 5772339 3'utr Gp210 FlyBase G13158.1 ATATAAGATAAACTCAGGCATTTGTAATACTTATATGCAGCTTCTGTCCTTTAAAGTAAATTCTTCTCATCCTGACGCCAGAAA 67 5772297 0.914720795 14 65 580 0.974683544 1.58546073 0.075949367 0.164179104 0.291139241 67 1 1 77 2R:5772256-5772339 6 Gp210 FBtr0335270|FBtr0086044 5772199|5772199 5774324|5772492 GCAGCT 6mer2-7 dme-miR-980-3p 2R + 5772260 5772318 3'utr Gp210 FlyBase G10061.1 AAGATAAACTCAGGCATTTGTAATACTTATATGCAGCTTCTGTCCTTTAAAGTAAATTC 45 5772297 0.896308237 9 43 390 0.971014493 1.826074803 0.130434783 0.355555556 0.579710145 45 2 0 67 2R:5772260-5772318 6 49.5 1957 FBgn0266580 2948.146667 58.77 90.26 0.016790209 0.842266462 0.548415688 -5 -5 -5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2R 5774799 5774805 - 2R_5774799_5774805_- 0.823349562 0.823349562 0.823349562 0 ZnT41F FBtr0086053|FBtr0086055|FBtr0086056|FBtr0086054 5774774|5774774|5774774|5774774 5774960|5774960|5774960|5774960 2R - 5774788 5774832 3'utr ZnT41F FlyBase G19917.1 TACTGTTAAACATCCAGTGACATTACCCCAAAGAAAATATATTCT 26 5774809 0.779912539 5 25 91 1 1.531478917 0.029411765 0.153846154 0.352941176 26 0 0 34 2R:5774788-5774832 7 ZnT41F FBtr0086056|FBtr0086054|FBtr0086053|FBtr0086055 5774774|5774774|5774774|5774774 5774960|5774960|5774960|5774960 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 5774792 5774825 3'utr ZnT41F FlyBase G15123.1 AAACATCCAGTGACATTACCCCAAAGAAAATATA 12 5774810 0.770891941 5 11 41 0.941176471 1.204119983 0 0.333333333 0.529411765 12 1 0 16 2R:5774792-5774825 7 17.5 1958 FBgn0025693 1109.333333 64.26 98.72666667 0.01577524 0.272331155 0.177257073 4 5 4.5 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 6011784 6011789 + 2R_6011784_6011789_+ 1 1 1 0 Src42A FBtr0335275|FBtr0335276 6011610|6011610 6012500|6012795 2R + 6011767 6011874 3'utr Src42A FlyBase G13169.1 CCGTTTGGTGCCCGTTGGCTGTGGTTGTCTAGGTACCGATACGATTCATGTTATTAGCATTTAAGGTAAATAGTTGCTGAGGTGGAATGCAATTTCAAATGACGTTCC 221 6011782 0.831153906 18 217 1827 0.985663082 1.962211439 0.508960573 0.20361991 0.369175627 221 2 2 275 2R:6011767-6011874 6 Src42A FBtr0335275|FBtr0335276 6011610|6011610 6012500|6012795 GCTGTG 6mer2-7 dme-miR-1008-3p 2R + 6011766 6011808 3'utr Src42A FlyBase G10068.1 CCCGTTTGGTGCCCGTTGGCTGTGGTTGTCTAGGTACCGATAC 145 6011782 0.824277264 7 143 1173 0.991416309 2.36361198 0.467811159 0.420689655 0.639484979 145 2 0 231 2R:6011766-6011808 6 176 1959 FBgn0264959 2196.93 83.74333333 128.84 0.080111792 2.101659834 1.366035393 2 2 2 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 6020435 6020441 - 2R_6020435_6020441_- 0.661615511 0.661615511 0.661615511 0 Strica FBtr0335289 6020309 6021344 2R - 6020362 6020466 3'utr Strica FlyBase G19970.1 TTATCAGGATCACTAGCCGAGTCGATCTAGTCTTTTTAATTGTCTTGCCTTTTTTCATCTATATATGTAAATCTTGAAAAATCGTCCCAGCAATTGTGACCAATA 33 6020434 0.986366973 10 33 289 1 1.602059991 0.05 0.151515152 0.3 33 0 0 40 2R:6020362-6020466 7 Strica FBtr0335289 6020309 6021344 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R - 6020426 6020453 3'utr Strica FlyBase G15165.1 TAGCCGAGTCGATCTAGTCTTTTTAATT 9 6020434 0.635192538 3 7 74 0.818181818 0.954242509 0.090909091 0.222222222 0.363636364 9 2 0 9 2R:6020426-6020453 7 19 1960 FBgn0033051 1511.393333 79.10666667 121.57 0.012571182 0.240182033 0.156288558 -7 -7 -7 0.01 dme-miR-282-5p 7mer-A1 GAGGCTA 2R 6021100 6021106 - 2R_6021100_6021106_- 0.823322306 0.823347092 0.823334699 1.75E-05 Strica FBtr0335289|FBtr0086028 6020309|6020866 6021344|6021344 2R - 6021063 6021130 3'utr Strica FlyBase G19973.1 AAACTAAAGAGGCGGTAAAAGTGTGAGGCTAAATATTAAAAAAAAATTAGTCTGGGGTCGGAATTGTT 19 6021107 0.955825423 4 19 93 1 1.380211242 0.208333333 0.263157895 0.416666667 19 0 0 24 2R:6021063-6021130 7 Strica FBtr0335289|FBtr0086028 6020309|6020866 6021344|6021344 GAGGCTA 7mer-A1 dme-miR-282-5p 2R - 6021066 6021122 3'utr Strica FlyBase G15167.1 GAGGCGGTAAAAGTGTGAGGCTAAATATTAAAAAAAAATTAGTCTGGGGTCGGAATT 22 6021107 0.824764868 3 21 94 1 1.51851394 0.242424242 0.380952381 0.606060606 21 0 0 33 2R:6021066-6021122 7 12.5 1961 FBgn0033051 1511.393333 79.10666667 121.57 0.008270514 0.158014495 0.10282142 1 1 1 0.01 dme-miR-965-3p 8mer-A1 TACGCTTA 2R 6026298 6026305 - 2R_6026298_6026305_- 0.625364919 0.625364919 0.625364919 0 SCAP FBtr0086027 6026271 6026669 2R - 6026282 6026383 3'utr SCAP FlyBase G19985.1 ACATAGTGTCTTAAAGCGCCTCAGCCTAATATAAAATGACTAAATGTTAAAATAAATACATTATTTATTAGAATCACCTACGCTTAATATTCAGAAAGAATA 54 6026305 0.868138262 9 51 371 0.950819672 1.286306739 0.131147541 0.12962963 0.229508197 54 1 2 58 2R:6026282-6026383 8 SCAP FBtr0086027 6026271 6026669 TACGCTTA 8mer-A1 dme-miR-965-3p 2R - 6026283 6026322 3'utr SCAP FlyBase G15175.1 TATTTATTAGAATCACCTACGCTTAATATTCAGAAAGAAT 18 6026305 0.854438311 3 18 131 1 1.414973348 0.153846154 0.444444444 0.615384615 18 0 0 26 2R:6026283-6026322 8 27.5 1962 FBgn0033052 1236.103333 29.14666667 44.57333333 0.022247331 0.943504117 0.616960814 0 0 0 0.01 dme-miR-965-3p 6mer3-8 TACGCT 2R 6026455 6026460 - 2R_6026455_6026460_- 1 1 1 0 SCAP FBtr0086027 6026271 6026669 2R - 6026437 6026562 3'utr SCAP FlyBase G19986.1 TATACACTATTAGGGTCCGCAGCAACTTACGGTTTTAACACAAGCTGTACGTATCTCATCTCTAGAATTTTGTGTTAGTTTGTGGACACTAAGTGTAACAGCTACGCTCCGGTAGGTTAAGGAACT 51 6026460 0.926251058 18 47 345 0.93220339 1.740362689 0.152542373 0.156862745 0.271186441 51 4 0 55 2R:6026437-6026562 6 SCAP FBtr0086027 6026271 6026669 TACGCT 6mer3-8 dme-miR-965-3p 2R - 6026438 6026567 3'utr SCAP FlyBase G15177.1 AAATATATACACTATTAGGGTCCGCAGCAACTTACGGTTTTAACACAAGCTGTACGTATCTCATCTCTAGAATTTTGTGTTAGTTTGTGGACACTAAGTGTAACAGCTACGCTCCGGTAGGTTAAGGAAC 36 6026484 0.908871633 18 34 279 0.923076923 1.681241237 0.096153846 0.361111111 0.557692308 36 4 0 48 2R:6026438-6026567 6 12.5 1963 FBgn0033052 1236.103333 29.14666667 44.57333333 0.010112423 0.428865508 0.280436733 0 24 12 0.01 dme-miR-283-5p 6mer3-8 TGATAT 2R 6081191 6081196 - 2R_6081191_6081196_- 1 1 1 0 Ars2 FBtr0086020|FBtr0086021|FBtr0086018 6080826|6081126|6080826 6081333|6081333|6081333 2R - 6081180 6081223 3'utr Ars2 FlyBase G20013.1 ATATAAAGATGGTTTATATACGACTAATGATATCTGTTTTCCTG 40 6081196 0.840562396 2 40 324 1 1.69019608 0.326530612 0.175 0.326530612 40 0 0 49 2R:6081180-6081223 6 Ars2 FBtr0086020|FBtr0086021|FBtr0086018 6080826|6081126|6080826 6081333|6081333|6081333 TGATAT 6mer3-8 dme-miR-283-5p 2R - 6081151 6081224 3'utr Ars2 FlyBase G15189.1 CATATAAAGATGGTTTATATACGACTAATGATATCTGTTTTCCTGTACAATGCTAGAACCTACCTTTATTGCCC 35 6081196 0.987058315 5 33 288 0.946428571 1.423245874 0.410714286 0.371428571 0.607142857 35 2 1 53 2R:6081151-6081224 6 36 1964 FBgn0033062 1878.093333 71.69666667 110.3966667 0.019168376 0.502115394 0.326096802 0 0 0 0.01 dme-miR-1003-3p 6mer2-7 TGTGAG 2R 6082370 6082375 - 2R_6082370_6082375_- 1 1 1 0 Ars2 FBtr0310666 6080826 6084356 2R - 6082356 6082403 5'utr Ars2 FlyBase G20017.1 AGTGCACTCAGTAGACTATTACAACCATTGTGAGTATCCATATGAAGA 16 6082376 0.709641842 5 15 104 0.95 0.977723605 0.2 0.1875 0.35 16 0 1 19 2R:6082356-6082403 6 Ars2 FBtr0310666 6080826 6084356 TGTGAG 6mer2-7 dme-miR-1003-3p 2R - 6082352 6082410 5'utr Ars2 FlyBase G15193.1 TGCGTATAGTGCACTCAGTAGACTATTACAACCATTGTGAGTATCCATATGAAGACGAG 15 6082385 0.91753155 7 12 87 0.913043478 1.021189299 0.086956522 0.5 0.695652174 14 1 1 21 2R:6082352-6082410 6 9 1965 FBgn0033062 1878.093333 71.69666667 110.3966667 0.004792094 0.125528848 0.081524201 1 10 5.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 6082803 6082808 - 2R_6082803_6082808_- 1 1 1 0 Ars2 FBtr0310666|FBtr0310666|FBtr0310666 6080826|6080826|6080826 6084356|6084356|6084356 2R - 6082769 6082841 5'utr Ars2 FlyBase G20019.1 TTGCTGGGGTCTAAACAATCAGCGACTGAGAGACTGTGAAATGGGAGCTATCGTCAATCGGGACCTCAGCCGA 35 6082805 0.78144351 9 34 121 0.956521739 1.643452676 0.173913043 0.228571429 0.413043478 35 2 0 44 2R:6082769-6082841 6 Ars2 FBtr0310666|FBtr0310666|FBtr0310666 6080826|6080826|6080826 6084356|6084356|6084356 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 6082784 6082829 5'utr Ars2 FlyBase G15196.1 AAACAATCAGCGACTGAGAGACTGTGAAATGGGAGCTATCGTCAAT 21 6082804 0.780265715 4 20 66 1 1.579783597 0.368421053 0.55 0.763157895 20 0 0 38 2R:6082784-6082829 6 23 1966 FBgn0033062 1878.093333 71.69666667 110.3966667 0.012246463 0.320795946 0.208339624 -3 -4 -3.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 2R 6083058 6083063 - 2R_6083058_6083063_- 1 1 1 0 Ars2 FBtr0310666 6080826 6084356 2R - 6083042 6083100 5'utr Ars2 FlyBase G20021.1 CTGTTGGTAAAGACAAGGTTGTCGAAACCGAGACTATTGATCTAGACAAAGTAAAGGAT 43 6083064 0.68885767 3 41 211 0.98 1.69019608 0.24 0.162790698 0.28 43 1 0 49 2R:6083042-6083100 6 Ars2 FBtr0310666 6080826 6084356 TGATCT 6mer3-8 dme-bantam-3p 2R - 6083048 6083111 5'utr Ars2 FlyBase G15197.1 AGAGAAGCCCTCTGTTGGTAAAGACAAGGTTGTCGAAACCGAGACTATTGATCTAGACAAAGTA 31 6083064 0.953905906 3 30 140 1 1.69019608 0.326530612 0.419354839 0.632653061 31 0 0 49 2R:6083048-6083111 6 34.5 1967 FBgn0033062 1878.093333 71.69666667 110.3966667 0.018369694 0.481193919 0.312509436 1 1 1 0.01 dme-miR-2b-2-5p 6mer2-7 TGAAGA 2R 6083484 6083489 - 2R_6083484_6083489_- 1 1 1 0 Ars2 FBtr0310666 6080826 6084356 2R - 6083473 6083511 5'utr Ars2 FlyBase G20023.1 CAAAAGACAGCGATTCCAAGCCTGAAGACAAACAGTTGA 9 6083498 0.808294038 4 9 18 1 0.954242509 0 0 0 9 0 0 9 2R:6083473-6083511 6 Ars2 FBtr0310666 6080826 6084356 TGAAGA 6mer2-7 dme-miR-2b-2-5p 2R - 6083479 6083510 5'utr Ars2 FlyBase G15198.1 AAAAGACAGCGATTCCAAGCCTGAAGACAAAC 6 6083498 0.801470792 2 6 12 1 1.113943352 0.461538462 0.666666667 0.846153846 6 0 0 13 2R:6083479-6083510 6 7.5 1968 FBgn0033062 1878.093333 71.69666667 110.3966667 0.003993412 0.104607374 0.067936834 9 9 9 0.01 dme-miR-190-5p 6mer3-8 ACATAT 2R 6090955 6090960 - 2R_6090955_6090960_- 1 1 1 0 EcR FBtr0302439|FBtr0086008|FBtr0086010|FBtr0086012 6087871|6090417|6090417|6090417 6092587|6092587|6092587|6092587 2R - 6090941 6090986 3'utr EcR FlyBase G20034.1 TTACACACACGCCTACACATCCAGCCACATATTTTTAATTTTAAGT 10 6090967 0.966916839 3 10 29 1 1.113943352 0 0.2 0.384615385 10 0 0 13 2R:6090941-6090986 6 EcR FBtr0086012|FBtr0086008|FBtr0086010|FBtr0302439 6090417|6090417|6090417|6087871 6092587|6092587|6092587|6092587 ACATAT 6mer3-8 dme-miR-190-5p 2R - 6090937 6090983 3'utr EcR FlyBase G15202.1 CACACACGCCTACACATCCAGCCACATATTTTTAATTTTAAGTCAAC 10 6090967 0.987067312 3 8 25 0.8 0.77815125 0 0.5 0.666666667 10 2 1 12 2R:6090937-6090983 6 7.5 1969 FBgn0000546 917.5266667 23.27333333 35.89 0.008174149 0.322257233 0.208971858 7 7 7 0.01 dme-miR-92b-3p 8mer-m1 GTGCAATT 2R 6091023 6091030 - 2R_6091023_6091030_- 0.596698355 0.596698356 0.596698355 0 EcR FBtr0302439|FBtr0086008|FBtr0086010|FBtr0086012 6087871|6090417|6090417|6090417 6092587|6092587|6092587|6092587 2R - 6091010 6091045 3'utr EcR FlyBase G20035.1 CTTTCTACTTGAATTGTGCAATTTTTTACTTTTACT 14 6091032 0.732402923 6 14 147 1 1.230448921 0 0.214285714 0.352941176 14 0 0 17 2R:6091010-6091045 8 EcR FBtr0086012|FBtr0086008|FBtr0086010|FBtr0302439 6090417|6090417|6090417|6087871 6092587|6092587|6092587|6092587 GTGCAATT 8mer-m1 dme-miR-92b-3p 2R - 6090996 6091041 3'utr EcR FlyBase G15202.2 CTACTTGAATTGTGCAATTTTTTACTTTTACTACTAATCCTAATTT 11 6091032 0.928711765 4 8 120 0.875 0.669006781 0.0625 0.363636364 0.5625 11 0 2 14 2R:6090996-6091041 8 10.5 1970 FBgn0000546 917.5266667 23.27333333 35.89 0.011443809 0.451160126 0.292560602 2 2 2 0.01 dme-miR-965-3p 6mer3-8 TACGCT 2R 6092335 6092340 - 2R_6092335_6092340_- 1 1 1 0 EcR FBtr0302439|FBtr0086009|FBtr0086008|FBtr0086010|FBtr0086011|FBtr0086012 6087871|6091864|6090417|6090417|6092275|6090417 6092587|6092587|6092587|6092587|6092587|6092587 2R - 6092228 6092451 5'utr-coding EcR FlyBase G20041.2 TAAAAAGTGAATAATTAATGGACAAGCGTAAAATGCAGTTATTTAGTCTTAAGCCTGCAAATATTACCTATTATTCATACAAATTAACATATAATACAGCCTATTAACAATTACGCTAAAGCTTAATTGAAAAAGCTTCAACAACAATTGGACAAACGCGTTGAGGAACCGGGAGAAAATTTAAGAAAAAAAAAACCATTGAAAATTATGAAATTTAGTATACA 63 6092341 0.979374601 26 54 375 0.896103896 1.838849091 0.103896104 0.206349206 0.350649351 63 8 0 69 2R:6092228-6092451 6 EcR FBtr0086011|FBtr0086012|FBtr0086008|FBtr0086010|FBtr0302439|FBtr0086009 6092275|6090417|6090417|6090417|6087871|6091864 6092587|6092587|6092587|6092587|6092587|6092587 TACGCT 6mer3-8 dme-miR-965-3p 2R - 6092328 6092441 5'utr EcR FlyBase G15207.1 ATAATTAATGGACAAGCGTAAAATGCAGTTATTTAGTCTTAAGCCTGCAAATATTACCTATTATTCATACAAATTAACATATAATACAGCCTATTAACAATTACGCTAAAGCTT 25 6092341 0.977033311 12 25 182 1 1.591064607 0.051282051 0.44 0.641025641 25 0 0 39 2R:6092328-6092441 6 8.5 1971 FBgn0000546 917.5266667 23.27333333 35.89 0.009264036 0.365224864 0.236834773 1 1 1 0.01 dme-miR-33-5p 6mer2-7 AATGCA 2R 6092415 6092420 - 2R_6092415_6092420_- 1 1 1 0 EcR FBtr0302439|FBtr0086009|FBtr0086008|FBtr0086010|FBtr0086011|FBtr0086012 6087871|6091864|6090417|6090417|6092275|6090417 6092587|6092587|6092587|6092587|6092587|6092587 2R - 6092228 6092451 5'utr-coding EcR FlyBase G20041.2 TAAAAAGTGAATAATTAATGGACAAGCGTAAAATGCAGTTATTTAGTCTTAAGCCTGCAAATATTACCTATTATTCATACAAATTAACATATAATACAGCCTATTAACAATTACGCTAAAGCTTAATTGAAAAAGCTTCAACAACAATTGGACAAACGCGTTGAGGAACCGGGAGAAAATTTAAGAAAAAAAAAACCATTGAAAATTATGAAATTTAGTATACA 63 6092411 0.979374601 26 54 375 0.896103896 1.838849091 0.103896104 0.206349206 0.350649351 63 8 0 69 2R:6092228-6092451 6 EcR FBtr0086011|FBtr0086012|FBtr0086008|FBtr0086010|FBtr0302439|FBtr0086009 6092275|6090417|6090417|6090417|6087871|6091864 6092587|6092587|6092587|6092587|6092587|6092587 AATGCA 6mer2-7 dme-miR-33-5p 2R - 6092328 6092441 5'utr EcR FlyBase G15207.1 ATAATTAATGGACAAGCGTAAAATGCAGTTATTTAGTCTTAAGCCTGCAAATATTACCTATTATTCATACAAATTAACATATAATACAGCCTATTAACAATTACGCTAAAGCTT 25 6092412 0.977033311 12 25 182 1 1.591064607 0.051282051 0.44 0.641025641 25 0 0 39 2R:6092328-6092441 6 15 1972 FBgn0000546 917.5266667 23.27333333 35.89 0.016348299 0.644514466 0.417943717 -9 -8 -8.5 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 2R 6209910 6209915 - 2R_6209910_6209915_- 1 1 1 0 l(2)k14710 FBtr0305967|FBtr0086000 6209780|6209780 6210093|6210093 2R - 6209885 6209930 3'utr l(2)k14710 FlyBase G20069.1 GAGCTTGGCTGTATTATGTGAATGAACCATTCTGCTATCTTCCTTA 21 6209908 0.867402234 7 18 156 0.88 1.041392685 0.52 0.19047619 0.32 21 2 1 22 2R:6209885-6209930 6 l(2)k14710 FBtr0086000|FBtr0305967 6209780|6209780 6210093|6210093 ATGTGA 6mer3-8 dme-miR-1003-3p 2R - 6209882 6209930 3'utr l(2)k14710 FlyBase G15222.1 GAGCTTGGCTGTATTATGTGAATGAACCATTCTGCTATCTTCCTTAATC 19 6209925 0.740576723 5 19 158 1 1.361727836 0.217391304 0.210526316 0.347826087 19 0 0 23 2R:6209882-6209930 6 17 1973 FBgn0021847 147.6666667 5.836666667 8.94 0.115124153 2.912621359 1.901565996 -7 10 1.5 0.01 dme-miR-970-3p 7mer-A1 CTTATGA 2R 6239889 6239895 + 2R_6239889_6239895_+ 0.823349562 0.823349562 0.823349562 0 bin3 FBtr0346718|FBtr0085993 6239761|6239761 6240602|6240602 2R + 6239826 6239921 3'utr bin3 FlyBase G13229.1 CTTAAAAAAAACCCCAAAAAGTTTTCGTAAAGAAAAAATTTAATGCAACCGTAAACGGAGACGCTTATGATTTTCTATGGTATAATGTGCGTATAT 124 6239893 0.965031683 12 118 619 0.947368421 2.158362492 0.118421053 0.153225806 0.309210526 124 8 0 144 2R:6239826-6239921 7 bin3 FBtr0346718|FBtr0085993 6239761|6239761 6240602|6240602 CTTATGA 7mer-A1 dme-miR-970-3p 2R + 6239829 6239913 3'utr bin3 FlyBase G10110.1 AAAAAAAACCCCAAAAAGTTTTCGTAAAGAAAAAATTTAATGCAACCGTAAACGGAGACGCTTATGATTTTCTATGGTATAATGT 95 6239893 0.966798336 10 91 489 0.964285714 1.829303773 0.071428571 0.315789474 0.535714286 95 4 1 135 2R:6239829-6239913 7 71 1974 FBgn0263144 2119.726667 46.07 71.03666667 0.033494885 1.541133058 0.999483835 -4 -4 -4 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 2R 6240009 6240014 + 2R_6240009_6240014_+ 1 1 1 0 bin3 FBtr0346718|FBtr0085993 6239761|6239761 6240602|6240602 2R + 6239945 6240119 3'utr bin3 FlyBase G13230.1 GAATGAATATATACACAAATATATACAGATACAGATCTATATATACAATTGGAACAGAGATGCATGTGTTTAGATTTATTGCATTCTTTAATGTTAGGGCTTACCATTTTTGCTAAAACGCTTTATAGTGAAAGCTTAATTTGATCCTGTTGGCAGTTCAATTGTAATCCTAGTT 34 6239985 0.985752785 17 33 281 0.974358974 1.579783597 0.358974359 0.117647059 0.230769231 34 1 0 38 2R:6239945-6240119 6 bin3 FBtr0346718|FBtr0085993 6239761|6239761 6240602|6240602 TGTGTT 6mer3-8 dme-miR-317-3p 2R + 6239958 6240047 3'utr bin3 FlyBase G10111.1 CACAAATATATACAGATACAGATCTATATATACAATTGGAACAGAGATGCATGTGTTTAGATTTATTGCATTCTTTAATGTTAGGGCTTA 15 6240005 0.921947671 9 14 118 0.947368421 1.255272505 0.052631579 0.2 0.368421053 15 1 0 18 2R:6239958-6240047 6 5.5 1975 FBgn0263144 2119.726667 46.07 71.03666667 0.002594674 0.119383547 0.077424804 24 4 14 0.01 dme-miR-305-5p 6mer3-8 AGTACA 2R 6255095 6255100 + 2R_6255095_6255100_+ 1 1 1 0 Pld FBtr0085997|FBtr0336520|FBtr0085996|FBtr0114492|FBtr0085999|FBtr0085995 6254945|6254945|6254945|6254945|6254945|6254945 6255266|6255266|6255266|6255266|6255266|6255266 2R + 6255094 6255131 3'utr Pld FlyBase G13241.1 AAGTACATGTAGCTATTCCTTACCAATAGTTAATTTAT 8 6255109 0.704824489 3 7 76 0.9 0.954242509 0 0.25 0.4 8 1 0 9 2R:6255094-6255131 6 Pld FBtr0085999|FBtr0085995|FBtr0085996|FBtr0114492|FBtr0085997|FBtr0336520 6254945|6254945|6254945|6254945|6254945|6254945 6255266|6255266|6255266|6255266|6255266|6255266 AGTACA 6mer3-8 dme-miR-305-5p 2R + 6255047 6255133 3'utr Pld FlyBase G10118.1 ATTTTGTAAATAGTGTATAATAGCCGTAGATAACTCTAGATACTTTCAAGTACATGTAGCTATTCCTTACCAATAGTTAATTTATTT 12 6255109 0.727780705 7 12 118 1 1.176091259 0.066666667 0.25 0.4 12 0 0 15 2R:6255047-6255133 6 7.5 1976 FBgn0033075 660.35 16.28666667 25.06 0.011357613 0.460499386 0.299281724 -14 -14 -14 0.01 dme-miR-8-3p 7mer-m8 CAGTATT 2R 6255199 6255205 + 2R_6255199_6255205_+ 0.661615243 0.661615243 0.661615243 0 Pld FBtr0085997|FBtr0336520|FBtr0085996|FBtr0114492|FBtr0085999|FBtr0085995 6254945|6254945|6254945|6254945|6254945|6254945 6255266|6255266|6255266|6255266|6255266|6255266 2R + 6255182 6255247 3'utr Pld FlyBase G13242.2 TTTTGTATGATGTTAAACAGTATTTTAGACCGATTTACACAAGTTTATTAAAGTGATATGAAGTGC 34 6255206 0.805003993 9 29 247 0.930232558 1.301029996 0.162790698 0.176470588 0.348837209 34 2 1 40 2R:6255182-6255247 7 Pld FBtr0085999|FBtr0085995|FBtr0085996|FBtr0114492|FBtr0085997|FBtr0336520 6254945|6254945|6254945|6254945|6254945|6254945 6255266|6255266|6255266|6255266|6255266|6255266 CAGTATT 7mer-m8 dme-miR-8-3p 2R + 6255189 6255255 3'utr Pld FlyBase G10119.1 TGATGTTAAACAGTATTTTAGACCGATTTACACAAGTTTATTAAAGTGATATGAAGTGCAAATGAAG 38 6255206 0.718122199 11 33 260 0.901960784 1.361727836 0.215686275 0.263157895 0.450980392 38 4 1 46 2R:6255189-6255255 7 23 1977 FBgn0033075 660.35 16.28666667 25.06 0.034830014 1.412198117 0.917797287 -7 -7 -7 0.01 dme-miR-986-5p 6mer3-8 ATTCGA 2R 6625315 6625320 - 2R_6625315_6625320_- 1 0.999999989 0.999999994 0 Vha16-1 FBtr0086152|FBtr0086150|FBtr0086153|FBtr0086151 6625240|6625240|6625240|6625240 6627469|6627469|6627469|6627469 2R - 6625241 6625394 3'utr Vha16-1 FlyBase G20116.1 GTTGCATGCACCCCACAACATAGACCTACCTATACATGTATCCAATGGTGCGGTTTTAGAAACTGTAACTGTGTATTCGAAACAACTTATAAAGCAAGTAAACAACCATCAACAACAGACATTGTATGAAATAAATTGTAATTTCTAATTTCCA 36 6625320 0.978912497 17 32 216 0.897435897 1.544068044 0.102564103 0.114285714 0.205128205 35 4 0 35 2R:6625241-6625394 6 Vha16-1 FBtr0086151|FBtr0086153|FBtr0086150|FBtr0086152 6625240|6625240|6625240|6625240 6627469|6627469|6627469|6627469 ATTCGA 6mer3-8 dme-miR-986-5p 2R - 6625261 6625384 3'utr Vha16-1 FlyBase G15266.1 CCCCACAACATAGACCTACCTATACATGTATCCAATGGTGCGGTTTTAGAAACTGTAACTGTGTATTCGAAACAACTTATAAAGCAAGTAAACAACCATCAACAACAGACATTGTATGAAATAA 16 6625321 0.998371042 10 16 74 1 1.447158031 0.035714286 0.375 0.642857143 16 0 0 28 2R:6625261-6625384 6 9 1978 FBgn0262736 36576.97333 1582.373333 2438.476667 0.000246056 0.005687659 0.003690829 0 1 0.5 0.01 dme-miR-277-3p 6mer3-8 TGCATT 2R 6625790 6625795 - 2R_6625790_6625795_- 1 1 1 0 Vha16-1 FBtr0086152|FBtr0086150|FBtr0086153|FBtr0086151 6625240|6625240|6625240|6625240 6627469|6627469|6627469|6627469 2R - 6625749 6625816 3'utr Vha16-1 FlyBase G20118.1 CCACCGCCCGTTGGACGCCGATGCATTCGTGATGCTGAGAATGCGGAGGAGCTCAACCTGTGCGGAGG 17 6625784 0.708690675 9 16 75 1 1.301029996 0.25 0.117647059 0.25 17 0 0 20 2R:6625749-6625816 6 Vha16-1 FBtr0086151|FBtr0086153|FBtr0086150|FBtr0086152 6625240|6625240|6625240|6625240 6627469|6627469|6627469|6627469 TGCATT 6mer3-8 dme-miR-277-3p 2R - 6625694 6625817 3'utr Vha16-1 FlyBase G15269.1 TCCACCGCCCGTTGGACGCCGATGCATTCGTGATGCTGAGAATGCGGAGGAGCTCAACCTGTGCGGAGGCGCTGAATTCCCGGGACCCGAATCGCTCTGCTTGCGCACACCTCCCGATCCCCAC 15 6625783 0.95159212 9 13 62 0.789473684 1.176091259 0.105263158 0.2 0.368421053 15 4 0 15 2R:6625694-6625817 6 7 1979 FBgn0262736 36576.97333 1582.373333 2438.476667 0.000191377 0.004423735 0.002870645 -11 -12 -11.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 6626425 6626431 - 2R_6626425_6626431_- 0.801970437 0.801970437 0.801970437 0 Vha16-1 FBtr0086152|FBtr0086152|FBtr0086152|FBtr0086150|FBtr0086150|FBtr0086150|FBtr0086153|FBtr0086153|FBtr0086153|FBtr0086151|FBtr0086151|FBtr0086151 6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240 6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469 2R - 6626359 6626544 3'utr Vha16-1 FlyBase G20121.3 ACACACATACAAAATGTAACTAAGTCCTACGTTTATTTTTAATTATTGTTCAATTCTAAGAATAATATATTAAAAATTAATAATAATAAATTATATATATAATTATGATTTTTTGTGATAAGAACAGATGGTAATGCAAACAATTACGGTATTGATATACATAATATATACAGAATATATATATAT 408 6626433 0.77285983 31 378 3488 0.928131417 1.509010399 0.223819302 0.159313725 0.295687885 408 22 13 452 2R:6626359-6626544 7 Vha16-1 FBtr0086151|FBtr0086151|FBtr0086151|FBtr0086153|FBtr0086153|FBtr0086153|FBtr0086150|FBtr0086150|FBtr0086150|FBtr0086152|FBtr0086152|FBtr0086152 6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240 6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 6626357 6626457 3'utr Vha16-1 FlyBase G15273.1 AAATTATATATATAATTATGATTTTTTGTGATAAGAACAGATGGTAATGCAAACAATTACGGTATTGATATACATAATATATACAGAATATATATATATAT 263 6626433 0.710250446 20 237 2224 0.92 1.423875743 0.245333333 0.30418251 0.512 263 18 12 345 2R:6626357-6626457 7 283 1980 FBgn0262736 36576.97333 1582.373333 2438.476667 0.007737108 0.178845279 0.116056062 2 2 2 0.01 dme-miR-277-3p 6mer3-8 TGCATT 2R 6626860 6626865 - 2R_6626860_6626865_- 1 1 1 0 Vha16-1 FBtr0086152|FBtr0086150|FBtr0086153|FBtr0086151 6625240|6625240|6625240|6625240 6627469|6627469|6627469|6627469 2R - 6626803 6626934 3'utr Vha16-1 FlyBase G20123.1 CGTTAAACAAAAAGAAAAAATTGTAAAGAAATCAACAACCAACAATTGTCAGAAGAAACTTTGTACATTTGCATTGAGCCTGACGCGGCTGCAACCAATTCAGATCAACAAATTTAGCGAAAGGGCCAAAAC 722 6626860 0.968736552 19 714 4007 0.990453461 2.919078092 0.054892601 0.13434903 0.254176611 722 8 0 830 2R:6626803-6626934 6 Vha16-1 FBtr0086151|FBtr0086153|FBtr0086150|FBtr0086152 6625240|6625240|6625240|6625240 6627469|6627469|6627469|6627469 TGCATT 6mer3-8 dme-miR-277-3p 2R - 6626803 6626984 3'utr Vha16-1 FlyBase G15274.1 TGTTTTTTCCATTATTATTATTAAATAATGTTTAGTGTATATGTAAAGTTCGTTAAACAAAAAGAAAAAATTGTAAAGAAATCAACAACCAACAATTGTCAGAAGAAACTTTGTACATTTGCATTGAGCCTGACGCGGCTGCAACCAATTCAGATCAACAAATTTAGCGAAAGGGCCAAAAC 342 6626860 0.971976736 17 331 1876 0.965073529 2.243038049 0.051470588 0.394736842 0.619485294 342 17 2 525 2R:6626803-6626984 6 505.5 1981 FBgn0262736 36576.97333 1582.373333 2438.476667 0.01382017 0.31945685 0.207301553 -5 -5 -5 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 2R 6627140 6627145 - 2R_6627140_6627145_- 1 1 1 0 Vha16-1 FBtr0086152|FBtr0086150|FBtr0086153|FBtr0086151 6625240|6625240|6625240|6625240 6627469|6627469|6627469|6627469 2R - 6627084 6627240 3'utr Vha16-1 FlyBase G20125.1 CTGCCGGACTGCAGGATCTCCGCCACGCACTGCCCATTGGTGGCCGCCGATTTGCACCTGTTGTTCAGTTTACCTCGATTCGCTGGCGCGTGGTTTAGCTTAGTTATTTTCCGTTCAAAATCAGTCTTAAACACGAGGAAAACAATTTGCAATTAAG 536 6627132 0.98825473 25 528 4835 0.986466165 2.339782585 0.172932331 0.194029851 0.35037594 536 7 2 656 2R:6627084-6627240 6 Vha16-1 FBtr0086151|FBtr0086153|FBtr0086150|FBtr0086152 6625240|6625240|6625240|6625240 6627469|6627469|6627469|6627469 TAGCTT 6mer3-8 dme-miR-79-3p 2R - 6627104 6627210 3'utr Vha16-1 FlyBase G15275.1 TGCCCATTGGTGGCCGCCGATTTGCACCTGTTGTTCAGTTTACCTCGATTCGCTGGCGCGTGGTTTAGCTTAGTTATTTTCCGTTCAAAATCAGTCTTAAACACGAG 461 6627132 0.87731216 19 450 4089 0.979073244 2.339120045 0.162929746 0.331887202 0.53961136 461 12 2 655 2R:6627104-6627210 6 284 1982 FBgn0262736 36576.97333 1582.373333 2438.476667 0.007764448 0.179477241 0.116466154 -13 -13 -13 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA 2R 6627288 6627293 - 2R_6627288_6627293_- 1 1 1 0 Vha16-1 FBtr0086152|FBtr0086150|FBtr0086153|FBtr0086151 6625240|6625240|6625240|6625240 6627469|6627469|6627469|6627469 2R - 6627251 6627378 3'utr Vha16-1 FlyBase G20126.1 AGGAGCAGGTAAAATTGTGTCAAGCCAATGAGCAACGTGCAACATGCAACTTCCAACAAGCAAAAACCACAACAGTGCGTGTGCGGTGCAAGCCCGGCGTGGACCGTTTGTACATAGGGAGAACAACC 22 6627292 0.942840953 9 22 90 1 1.397940009 0.16 0.136363636 0.24 22 0 0 25 2R:6627251-6627378 6 Vha16-1 FBtr0086151|FBtr0086153|FBtr0086150|FBtr0086152 6625240|6625240|6625240|6625240 6627469|6627469|6627469|6627469 GTGCAA 6mer3-8 dme-miR-92b-3p 2R - 6627248 6627312 3'utr Vha16-1 FlyBase G15276.1 CCACAACAGTGCGTGTGCGGTGCAAGCCCGGCGTGGACCGTTTGTACATAGGGAGAACAACCAAA 18 6627292 0.945579313 5 17 71 0.888888889 1.380211242 0 0.222222222 0.481481481 18 3 0 24 2R:6627248-6627312 6 14.5 1983 FBgn0262736 36576.97333 1582.373333 2438.476667 0.000396424 0.009163451 0.005946335 -1 -1 -1 0.01 dme-miR-33-5p 8mer-A1 CAATGCAA 2R 6627456 6627463 - 2R_6627456_6627463_- 0.634552243 0.634552243 0.634552243 0 Vha16-1 FBtr0086152|FBtr0086150|FBtr0086153|FBtr0086151 6625240|6625240|6625240|6625240 6627469|6627469|6627469|6627469 2R - 6627390 6627674 stop_codon Vha16-1 FlyBase G20127.1 GGGCTTCATTCACTTGGGAGCCGGTCTGGCGGTGGGCTTCTCTGGTCTGGCAGCTGGTTTTGCGATCGGCATCGTGGGAGACGCCGGTGTCCGTGGCACAGCACAGCAGCCTAGACTGTTCGTGGGCATGATCCTGATTCTCATCTTCGCCGAAGTGTTGGGTCTCTACGGCTTGATTGTGGCCATTTACCTGTACACGAAATAAATCAATCAATGCAAACACACAACAACAACAGATAGACAAACGGCGCCCAGCGGTCAACAGCAGCCACATCAACATCAGCA 527 6627437 0.991841914 45 505 2120 0.957307061 2.163608563 0.174055829 0.138519924 0.254515599 527 23 3 583 2R:6627390-6627674 8 Vha16-1 FBtr0086151|FBtr0086153|FBtr0086150|FBtr0086152 6625240|6625240|6625240|6625240 6627469|6627469|6627469|6627469 CAATGCAA 8mer-A1 dme-miR-33-5p 2R - 6627409 6627659 stop_codon Vha16-1 FlyBase G15277.1 GGGAGCCGGTCTGGCGGTGGGCTTCTCTGGTCTGGCAGCTGGTTTTGCGATCGGCATCGTGGGAGACGCCGGTGTCCGTGGCACAGCACAGCAGCCTAGACTGTTCGTGGGCATGATCCTGATTCTCATCTTCGCCGAAGTGTTGGGTCTCTACGGCTTGATTGTGGCCATTTACCTGTACACGAAATAAATCAATCAATGCAAACACACAACAACAACAGATAGACAAACGGCGCCCAGCGGTCAACAGC 219 6627437 0.980735945 35 202 868 0.917127072 1.566895574 0.20718232 0.442922374 0.662983425 219 22 8 332 2R:6627409-6627659 8 105.5 1984 FBgn0262736 36576.97333 1582.373333 2438.476667 0.002884328 0.066672003 0.043264716 -26 -26 -26 0.01 dme-miR-932-5p 6mer2-7 GAATTG 2R 6642446 6642451 - 2R_6642446_6642451_- 1 1 1 0 Fmo-2 FBtr0086148 6642416 6642703 2R - 6642433 6642507 3'utr Fmo-2 FlyBase G20142.1 TAACCAGGAGTATATCTGATAATGTCCACCATAGCTCTTTAATTCTAAGCCTCGTAGAATTGTAGAAGTCAAATT 22 6642469 0.777786995 8 21 154 0.965517241 1.447158031 0.068965517 0.227272727 0.413793103 22 1 0 28 2R:6642433-6642507 6 Fmo-2 FBtr0086148 6642416 6642703 GAATTG 6mer2-7 dme-miR-932-5p 2R - 6642431 6642485 3'utr Fmo-2 FlyBase G15285.1 TGTCCACCATAGCTCTTTAATTCTAAGCCTCGTAGAATTGTAGAAGTCAAATTAA 19 6642448 0.765529089 5 17 137 0.90625 1.462397998 0.03125 0.526315789 0.71875 19 3 0 29 2R:6642431-6642485 6 13.5 1985 FBgn0033079 393.3166667 28.71 43.87 0.034323488 0.470219436 0.307727376 18 -3 7.5 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 2R 6642578 6642583 - 2R_6642578_6642583_- 1 1 1 0 Fmo-2 FBtr0086148 6642416 6642703 2R - 6642543 6642600 3'utr Fmo-2 FlyBase G20143.1 ACGGATTATAACTCAGATGTGTTAATTAATATTTTATAAGAACAATGTAAATCAAAGT 16 6642574 0.98556447 10 15 149 0.944444444 1.230448921 0.277777778 0.125 0.222222222 16 1 0 17 2R:6642543-6642600 6 Fmo-2 FBtr0086148 6642416 6642703 TGTGTT 6mer3-8 dme-miR-317-3p 2R - 6642517 6642599 3'utr Fmo-2 FlyBase G15286.1 CGGATTATAACTCAGATGTGTTAATTAATATTTTATAAGAACAATGTAAATCAAAGTATGTTTTGAACGATTAATTCAAAACG 14 6642575 0.990922515 8 13 135 0.952380952 1.301029996 0.238095238 0.357142857 0.571428571 14 1 0 20 2R:6642517-6642599 6 13 1986 FBgn0033079 393.3166667 28.71 43.87 0.033052248 0.452803901 0.296330066 -9 -8 -8.5 0.01 dme-miR-305-5p 6mer3-8 AGTACA 2R 6642638 6642643 - 2R_6642638_6642643_- 1 1 1 0 Fmo-2 FBtr0086148 6642416 6642703 2R - 6642601 6642706 stop_codon Fmo-2 FlyBase G20143.2 TGATGAACCTGATTTCATCCCATTCTAATATCTTACGTTAGGCGATAAAAAGTGTTTCACTGTAGTACACGAAGATTTAGCGGACTCTTCGGTTCGGATTCTTTTA 20 6642646 0.985564473 9 17 122 0.916666667 1.342422681 0.166666667 0.2 0.333333333 20 2 0 22 2R:6642601-6642706 6 Fmo-2 FBtr0086148 6642416 6642703 AGTACA 6mer3-8 dme-miR-305-5p 2R - 6642610 6642671 3'utr Fmo-2 FlyBase G15287.1 CGTTAGGCGATAAAAAGTGTTTCACTGTAGTACACGAAGATTTAGCGGACTCTTCGGTTCGG 13 6642646 0.740402967 5 11 70 1 1.414973348 0.038461538 0.538461538 0.769230769 13 0 0 26 2R:6642610-6642671 6 9 1987 FBgn0033079 393.3166667 28.71 43.87 0.022882326 0.313479624 0.205151584 3 3 3 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2R 6660079 6660084 + 2R_6660079_6660084_+ 0.730949366 0.730948385 0.730948875 7.07E-07 sced FBtr0086110|FBtr0086110|FBtr0086110|FBtr0336663|FBtr0336663|FBtr0336663 6659979|6659979|6659979|6659979|6659979|6659979 6660624|6660624|6660624|6660326|6660326|6660326 2R + 6660055 6660098 3'utr sced FlyBase G13327.1 ATTTATGTTGTAGTTTCTTGTGAATGTGATCTGATTAGTTCGAC 48 6660075 0.768618275 9 44 517 0.945454545 1.414973348 0.145454545 0.125 0.236363636 48 2 1 52 2R:6660055-6660098 6 sced FBtr0086110|FBtr0086110|FBtr0086110|FBtr0336663|FBtr0336663|FBtr0336663 6659979|6659979|6659979|6659979|6659979|6659979 6660624|6660624|6660624|6660326|6660326|6660326 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 6660006 6660104 3'utr sced FlyBase G10179.1 ATGTTTAACACTTCGCTGTGGACACAAACTGCTTTTTAACCATTTCGCTATTTATGTTGTAGTTTCTTGTGAATGTGATCTGATTAGTTCGACAAGTTG 42 6660075 0.964592412 12 39 419 0.93442623 1.755874856 0.131147541 0.380952381 0.573770492 42 4 0 57 2R:6660006-6660104 6 41.5 1988 FBgn0013732 116.0133333 4.383333333 6.713333333 0.357717504 9.467680608 6.181727905 4 4 4 0.01 dme-miR-965-3p 7mer-m8 TACGCTT 2R 6660474 6660480 + 2R_6660474_6660480_+ 0.620204855 0.620204855 0.620204855 0 sced FBtr0086110 6659979 6660624 2R + 6660456 6660505 3'utr sced FlyBase G13330.1 TGGCGGCGTAGCCTGAACTACGCTTTTCGGCTTCGCATAACATATCAGAG 44 6660481 0.955604803 4 42 300 0.97826087 1.352182518 0.347826087 0.022727273 0.065217391 44 0 1 45 2R:6660456-6660505 7 sced FBtr0086110 6659979 6660624 TACGCTT 7mer-m8 dme-miR-965-3p 2R + 6660456 6660495 3'utr sced FlyBase G10181.1 TGGCGGCGTAGCCTGAACTACGCTTTTCGGCTTCGCATAA 21 6660481 0.669762867 3 20 134 1 1.491361694 0.193548387 0.428571429 0.612903226 21 0 0 31 2R:6660456-6660495 7 31.5 1989 FBgn0013732 116.0133333 4.383333333 6.713333333 0.271520515 7.186311787 4.692154916 -7 -7 -7 0.01 dme-miR-2535b-3p 6mer3-8 CCGTGA 2R 6660562 6660567 + 2R_6660562_6660567_+ 0.999999999 1 1 0 sced FBtr0086110 6659979 6660624 2R + 6660534 6660581 3'utr sced FlyBase G13331.1 AAGATAGCATAACCAATGCTGAACTGTACCGTGACTAAACCATAAGCT 16 6660558 0.962489818 5 16 84 1 1.255272505 0.055555556 0.0625 0.166666667 16 0 0 18 2R:6660534-6660581 6 sced FBtr0086110 6659979 6660624 CCGTGA 6mer3-8 dme-miR-2535b-3p 2R + 6660538 6660582 3'utr sced FlyBase G10182.1 TAGCATAACCAATGCTGAACTGTACCGTGACTAAACCATAAGCTT 15 6660558 0.892305244 3 15 78 1 1.301029996 0 0.266666667 0.45 15 0 0 20 2R:6660538-6660582 6 15.5 1990 FBgn0013732 116.0133333 4.383333333 6.713333333 0.133605333 3.536121673 2.308838133 4 4 4 0.01 dme-miR-304-5p 6mer3-8 TGAGAT 2R 6667438 6667443 + 2R_6667438_6667443_+ 1 1 1 0 Adf1 FBtr0086112|FBtr0086113|FBtr0086111 6667376|6667376|6667376 6668085|6668085|6668085 2R + 6667420 6667445 stop_codon Adf1 FlyBase G13338.1 CTGGAGAGCGTTCTGCCCTGAGATCA 10 6667435 0.784926626 2 9 41 0.916666667 0.740362689 0.166666667 0.2 0.333333333 10 0 1 11 2R:6667420-6667445 6 Adf1 FBtr0086112|FBtr0086113|FBtr0086111 6667376|6667376|6667376 6668085|6668085|6668085 TGAGAT 6mer3-8 dme-miR-304-5p 2R + 6667421 6667444 stop_codon Adf1 FlyBase G10186.1 TGGAGAGCGTTCTGCCCTGAGATC 6 6667431 0.575256062 4 6 24 1 0.954242509 0.222222222 0.5 0.666666667 6 0 0 9 2R:6667421-6667444 6 8 1991 FBgn0000054 324.7166667 22.48333333 34.04 0.024636863 0.355819125 0.235017626 3 7 5 0.01 dme-miR-995-5p 6mer3-8 AATTCG 2R 6667666 6667671 + 2R_6667666_6667671_+ 1 1 1 0 Adf1 FBtr0086112|FBtr0086113|FBtr0086111|FBtr0330252 6667376|6667376|6667376|6667439 6668085|6668085|6668085|6668085 2R + 6667584 6667734 3'utr Adf1 FlyBase G13339.1 TAACGCGTAATGATACTTCCCCACGCCCATGTAGACAAACATATATATTTATATGCTTAGTTGACCCCATGATCGGTGATTTAATTCGCGCCCAGTTCTCAGCTCTGTACAAAAAATGCGATTGAAAATAGCGATTCTAGAATTATGAGTA 77 6667665 0.898760895 22 72 491 0.966292135 1.633468456 0.08988764 0.116883117 0.235955056 77 2 1 86 2R:6667584-6667734 6 Adf1 FBtr0086112|FBtr0086113|FBtr0086111|FBtr0330252 6667376|6667376|6667376|6667439 6668085|6668085|6668085|6668085 AATTCG 6mer3-8 dme-miR-995-5p 2R + 6667593 6667827 3'utr Adf1 FlyBase G10188.1 ATGATACTTCCCCACGCCCATGTAGACAAACATATATATTTATATGCTTAGTTGACCCCATGATCGGTGATTTAATTCGCGCCCAGTTCTCAGCTCTGTACAAAAAATGCGATTGAAAATAGCGATTCTAGAATTATGAGTAGCTTGTTAAAAGACCGTGGAAACACTTTATATGCAGCGTATTGTAAATTTTGACTACGATTTAGTTGTAATTTGCCATCGGGTCTTAGCTCTA 88 6667664 0.799933807 33 82 665 0.943089431 2.064457989 0.162601626 0.295454545 0.495934959 88 7 0 116 2R:6667593-6667827 6 28 1992 FBgn0000054 324.7166667 22.48333333 34.04 0.08622902 1.245366938 0.822561692 1 2 1.5 0.01 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2R 6667783 6667788 + 2R_6667783_6667788_+ 0.912509 0.73886653 0.825687765 0.122783789 Adf1 FBtr0086112|FBtr0086113|FBtr0086111|FBtr0330252 6667376|6667376|6667376|6667439 6668085|6668085|6668085|6668085 2R + 6667739 6667789 3'utr Adf1 FlyBase G13339.2 GTTAAAAGACCGTGGAAACACTTTATATGCAGCGTATTGTAAATTTTGACT 49 6667766 0.756989286 9 41 349 0.883333333 1.423245874 0.366666667 0.142857143 0.3 49 6 1 53 2R:6667739-6667789 6 Adf1 FBtr0086112|FBtr0086113|FBtr0086111|FBtr0330252 6667376|6667376|6667376|6667439 6668085|6668085|6668085|6668085 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2R + 6667593 6667827 3'utr Adf1 FlyBase G10188.1 ATGATACTTCCCCACGCCCATGTAGACAAACATATATATTTATATGCTTAGTTGACCCCATGATCGGTGATTTAATTCGCGCCCAGTTCTCAGCTCTGTACAAAAAATGCGATTGAAAATAGCGATTCTAGAATTATGAGTAGCTTGTTAAAAGACCGTGGAAACACTTTATATGCAGCGTATTGTAAATTTTGACTACGATTTAGTTGTAATTTGCCATCGGGTCTTAGCTCTA 88 6667766 0.799933807 33 82 665 0.943089431 2.064457989 0.162601626 0.295454545 0.495934959 88 7 0 116 2R:6667593-6667827 6 15 1993 FBgn0000054 324.7166667 22.48333333 34.04 0.046194118 0.66716086 0.440658049 17 17 17 0.01 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2R 6669838 6669843 + 2R_6669838_6669843_+ 1 1 1 0 CG9410 FBtr0330253 6669378 6670076 2R + 6669834 6669900 3'utr CG9410 FlyBase G13345.1 ATTTTTTGACCTTATCTGCGATCAAATGGAAAACGCTTTTATCCAGGAGGTCCGTCGACGGAGTGGT 63 6669848 0.91409507 8 60 402 0.976190476 1.612783857 0.202380952 0.222222222 0.416666667 63 1 1 82 2R:6669834-6669900 6 CG9410 FBtr0330253 6669378 6670076 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2R + 6669834 6669864 3'utr CG9410 FlyBase G10189.1 ATTTTTTGACCTTATCTGCGATCAAATGGAA 38 6669848 0.727444417 2 36 233 0.953125 1.785329835 0.234375 0.447368421 0.671875 38 3 0 61 2R:6669834-6669864 6 46 1994 FBgn0033086 44.95 6.64 10.13666667 1.023359288 6.927710843 4.537980927 -10 -10 -10 0.01 dme-miR-999-3p 6mer2-7 GTTAAC 2R 6670221 6670226 - 2R_6670221_6670226_- 1 1 1 0 Hsepi FBtr0086145|FBtr0302190 6670152|6670152 6671031|6671031 2R - 6670188 6670257 3'utr Hsepi FlyBase G20162.1 TGTGTCCCACTACTAATCCCAAAACGAGACTGTTAACGAAAATATTTGATTTTGAATATTATGTTAAGTG 145 6670225 0.686670006 9 139 551 0.964705882 1.913813852 0.035294118 0.137931034 0.264705882 145 5 1 164 2R:6670188-6670257 6 Hsepi FBtr0302190|FBtr0086145 6670152|6670152 6671031|6671031 GTTAAC 6mer2-7 dme-miR-999-3p 2R - 6670161 6670258 3'utr Hsepi FlyBase G15301.1 GTGTGTCCCACTACTAATCCCAAAACGAGACTGTTAACGAAAATATTTGATTTTGAATATTATGTTAAGTGAACCAAATTAAAGTACTTAATTTTTGT 127 6670225 0.932323311 9 127 481 1 2.252853031 0.016759777 0.307086614 0.508379888 127 0 0 179 2R:6670161-6670258 6 131 1995 FBgn0033087 180.49 7.23 11.15666667 0.725801983 18.11894882 11.74185838 -1 -1 -1 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 2R 6670275 6670280 - 2R_6670275_6670280_- 1 1 1 0 Hsepi FBtr0086145|FBtr0302190 6670152|6670152 6671031|6671031 2R - 6670266 6670308 3'utr Hsepi FlyBase G20163.1 AATTAAGCAGAGAAATGTACCCTTTCGAAGTTAATCTTCGTAT 28 6670293 0.902290753 3 27 158 0.972972973 1.255272505 0.027027027 0.25 0.432432432 28 0 1 36 2R:6670266-6670308 6 Hsepi FBtr0302190|FBtr0086145 6670152|6670152 6671031|6671031 AGTTAA 6mer3-8 dme-miR-999-3p 2R - 6670268 6670304 3'utr Hsepi FlyBase G15302.1 AAGCAGAGAAATGTACCCTTTCGAAGTTAATCTTCGT 10 6670293 0.974870291 2 10 52 1 1.230448921 0.235294118 0.6 0.764705882 10 0 0 17 2R:6670268-6670304 6 12.5 1996 FBgn0033087 180.49 7.23 11.15666667 0.069255914 1.728907331 1.120406334 13 13 13 0.01 dme-miR-184-5p 7mer-m8 TGATAAG 2R 6670437 6670443 - 2R_6670437_6670443_- 0.657640236 0.658999343 0.658319789 0.000961029 Hsepi FBtr0086145|FBtr0302190 6670152|6670152 6671031|6671031 2R - 6670396 6670503 3'utr Hsepi FlyBase G20165.1 AGCGCTCCCACTCAATACTAACTGCCCAAATAACGATGCACGATAATAACGACTTATATATGATAAGCCTGTAATGTAATGTATTGTAGTGTATGCCACTCGAGAATA 17 6670458 0.971457255 10 16 99 0.947368421 1.255272505 0.263157895 0.117647059 0.210526316 17 1 0 18 2R:6670396-6670503 7 Hsepi FBtr0302190|FBtr0086145 6670152|6670152 6671031|6671031 TGATAAG 7mer-m8 dme-miR-184-5p 2R - 6670415 6670470 3'utr Hsepi FlyBase G15304.1 CGATGCACGATAATAACGACTTATATATGATAAGCCTGTAATGTAATGTATTGTAG 7 6670457 0.971527834 5 7 40 1 0.954242509 0.222222222 0.142857143 0.333333333 7 0 0 9 2R:6670415-6670470 7 6 1997 FBgn0033087 180.49 7.23 11.15666667 0.033242839 0.829875519 0.53779504 15 14 14.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 2R 6670902 6670907 - 2R_6670902_6670907_- 1 1 1 0 Hsepi FBtr0086145|FBtr0302190 6670152|6670152 6671031|6671031 2R - 6670891 6670936 3'utr Hsepi FlyBase G20169.2 GCCGTGTCCTTTCCACAACCTCACACTCCTGATCTGGAAATAGTTT 45 6670907 0.75866488 6 40 233 0.910714286 1.008600172 0.035714286 0.222222222 0.375 45 1 4 51 2R:6670891-6670936 6 Hsepi FBtr0302190|FBtr0086145 6670152|6670152 6671031|6671031 TGATCT 6mer3-8 dme-bantam-3p 2R - 6670760 6670940 3'utr Hsepi FlyBase G15307.1 AAACGCCGTGTCCTTTCCACAACCTCACACTCCTGATCTGGAAATAGTTTCGTGTTTCTATTCTGTTATTTCCGCCCACGTATGTGTGCTGAAATCCTTATTAAGCTTGTCTATCTGGGCGCCTAGTGTTAAGCTGTTGTACCTTTACCTTTGATTGCATTATCAGATGTTGGCCTCGTCT 61 6670907 0.987093559 22 55 474 0.91954023 1.124938737 0.068965517 0.344262295 0.540229885 61 2 5 80 2R:6670760-6670940 6 34 1998 FBgn0033087 180.49 7.23 11.15666667 0.188376087 4.702627939 3.047505229 0 0 0 0.01 dme-miR-980-3p 6mer3-8 GGCAGC 2R 6695212 6695217 - 2R_6695212_6695217_- 0.999998019 1 0.999999009 1.41E-06 Mob4 FBtr0086141|FBtr0307075 6695112|6695112 6695593|6695593 2R - 6695191 6695251 3'utr Mob4 FlyBase G20179.1 TCCCCGTAAACTAAACTAAATTCCCTTGACTACTGGCAGCCAAAACACCAACACAGCTGTA 46 6695218 0.948241395 4 44 174 0.960784314 1.389166084 0.078431373 0.086956522 0.176470588 46 1 1 49 2R:6695191-6695251 6 Mob4 FBtr0086141|FBtr0307075 6695112|6695112 6695593|6695593 GGCAGC 6mer3-8 dme-miR-980-3p 2R - 6695196 6695235 3'utr Mob4 FlyBase G15314.1 TAAATTCCCTTGACTACTGGCAGCCAAAACACCAACACAG 29 6695218 0.982620591 2 29 111 1 1.579783597 0.052631579 0.275862069 0.447368421 29 0 0 38 2R:6695196-6695235 6 37.5 1999 FBgn0259483 539.6566667 46.58333333 71.19333333 0.069488625 0.805008945 0.526734713 1 1 1 0.01 dme-miR-33-5p 6mer2-7 AATGCA 2R 6695459 6695464 - 2R_6695459_6695464_- 1 1 1 0 Mob4 FBtr0086141|FBtr0307075 6695112|6695112 6695593|6695593 2R - 6695451 6695534 3'utr Mob4 FlyBase G20181.1 ATTTACCAATAGCTTGCAAGTTGGGTTGGCTCACCCTGACAGGGAAACGATTCCACGCGGACCCGACTCTAATGCAGATCTTGT 19 6695463 0.979619965 10 16 110 0.821428571 1.361727836 0.357142857 0.368421053 0.571428571 19 5 0 23 2R:6695451-6695534 6 Mob4 FBtr0086141|FBtr0307075 6695112|6695112 6695593|6695593 AATGCA 6mer2-7 dme-miR-33-5p 2R - 6695448 6695534 3'utr Mob4 FlyBase G15315.1 ATTTACCAATAGCTTGCAAGTTGGGTTGGCTCACCCTGACAGGGAAACGATTCCACGCGGACCCGACTCTAATGCAGATCTTGTATG 11 6695464 0.970090156 7 10 59 0.933333333 0.84509804 0.066666667 0.272727273 0.466666667 11 0 1 14 2R:6695448-6695534 6 6 2000 FBgn0259483 539.6566667 46.58333333 71.19333333 0.01111818 0.128801431 0.084277554 -1 0 -0.5 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 2R 6695520 6695525 - 2R_6695520_6695525_- 1 1 1 0 Mob4 FBtr0086141|FBtr0307075 6695112|6695112 6695593|6695593 2R - 6695451 6695534 3'utr Mob4 FlyBase G20181.1 ATTTACCAATAGCTTGCAAGTTGGGTTGGCTCACCCTGACAGGGAAACGATTCCACGCGGACCCGACTCTAATGCAGATCTTGT 19 6695522 0.979619965 10 16 110 0.821428571 1.361727836 0.357142857 0.368421053 0.571428571 19 5 0 23 2R:6695451-6695534 6 Mob4 FBtr0086141|FBtr0307075 6695112|6695112 6695593|6695593 TAGCTT 6mer3-8 dme-miR-79-3p 2R - 6695448 6695534 3'utr Mob4 FlyBase G15315.1 ATTTACCAATAGCTTGCAAGTTGGGTTGGCTCACCCTGACAGGGAAACGATTCCACGCGGACCCGACTCTAATGCAGATCTTGTATG 11 6695508 0.970090156 7 10 59 0.933333333 0.84509804 0.066666667 0.272727273 0.466666667 11 0 1 14 2R:6695448-6695534 6 6 2001 FBgn0259483 539.6566667 46.58333333 71.19333333 0.01111818 0.128801431 0.084277554 -3 -17 -10 0.01 dme-miR-1012-3p 7mer-A1 TGACTAA 2R 6698613 6698619 + 2R_6698613_6698619_+ 0.823349562 0.823349562 0.823349562 0 Rab2 FBtr0086124|FBtr0336658 6698543|6698543 6699469|6698844 2R + 6698553 6698641 3'utr Rab2 FlyBase G13358.1 CGCAGATGCCCGATTGCAATTCTGGGATAGGCGCAGCCGCTTCTGTAAAAGCTACTTTAGTGACTAACTAATAGAAGGTAGTTGAAGGA 22 6698609 0.966296488 10 21 142 0.961538462 1.397940009 0.307692308 0.136363636 0.269230769 22 1 0 25 2R:6698553-6698641 7 Rab2 FBtr0086124|FBtr0336658 6698543|6698543 6699469|6698844 TGACTAA 7mer-A1 dme-miR-1012-3p 2R + 6698559 6698638 3'utr Rab2 FlyBase G10197.1 TGCCCGATTGCAATTCTGGGATAGGCGCAGCCGCTTCTGTAAAAGCTACTTTAGTGACTAACTAATAGAAGGTAGTTGAA 18 6698609 0.979494153 5 15 103 0.896551724 1.414973348 0.068965517 0.388888889 0.620689655 18 3 0 26 2R:6698559-6698638 7 11.5 2002 FBgn0014009 1265.866667 136.76 209.3033333 0.009084685 0.084088915 0.05494418 4 4 4 0.01 dme-miR-2535b-3p 6mer2-7 CGTGAG 2R 6699264 6699269 + 2R_6699264_6699269_+ 1 1 1 0 Rab2 FBtr0086124 6698543 6699469 2R + 6699260 6699289 3'utr Rab2 FlyBase G13360.1 AAAACGTGAGGGCCGAAATGGGGTTATATA 10 6699278 0.923605014 3 9 42 1 1.079181246 0 0.1 0.25 10 0 0 12 2R:6699260-6699289 6 Rab2 FBtr0086124 6698543 6699469 CGTGAG 6mer2-7 dme-miR-2535b-3p 2R + 6699266 6699288 3'utr Rab2 FlyBase G10198.1 TGAGGGCCGAAATGGGGTTATAT 5 6699278 0.922936308 3 5 19 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2R:6699266-6699288 3 6.5 2003 FBgn0014009 1265.866667 136.76 209.3033333 0.005134822 0.047528517 0.031055406 -14 -14 -14 0.01 dme-miR-8-3p 6mer2-7 AGTATT 2R 6699354 6699359 + 2R_6699354_6699359_+ 1 1 1 0 Rab2 FBtr0086124 6698543 6699469 2R + 6699316 6699367 3'utr Rab2 FlyBase G13361.1 AGTGGTAACACGAAATGCTGCGATTCAATGATCAATTTAGTATTTTACGAAG 15 6699344 0.98412494 6 15 122 1 1.230448921 0.058823529 0.133333333 0.235294118 15 0 0 17 2R:6699316-6699367 6 Rab2 FBtr0086124 6698543 6699469 AGTATT 6mer2-7 dme-miR-8-3p 2R + 6699313 6699361 3'utr Rab2 FlyBase G10199.1 ACCAGTGGTAACACGAAATGCTGCGATTCAATGATCAATTTAGTATTTT 6 6699344 0.982868529 3 6 48 1 1.113943352 0.230769231 0.666666667 0.846153846 6 0 0 13 2R:6699313-6699361 6 4.5 2004 FBgn0014009 1265.866667 136.76 209.3033333 0.003554877 0.032904358 0.021499896 10 10 10 0.01 dme-miR-7-5p 6mer3-8 GTCTTC 2R 6700313 6700318 - 2R_6700313_6700318_- 1 1 1 0 CG45092 FBtr0344559|FBtr0344560|FBtr0344561 6700219|6700219|6699693 6705333|6705333|6705333 2R - 6700308 6700336 3'utr CG45092 FlyBase G20186.1 CAAACGGGTCCCTCAATTGTCTTCTTTAC 7 6700320 0.758022796 2 7 63 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 2R:6700308-6700336 6 CG45092 FBtr0344561|FBtr0344560|FBtr0344559 6699693|6700219|6700219 6705333|6705333|6705333 GTCTTC 6mer3-8 dme-miR-7-5p 2R - 6700305 6700338 3'utr CG45092 FlyBase G15320.1 TGCAAACGGGTCCCTCAATTGTCTTCTTTACAAA 6 6700320 0.874754292 2 6 52 1 0.954242509 0.444444444 0.5 0.666666667 6 0 0 9 2R:6700305-6700338 6 6.5 2005 FBgn0266525 326.5166667 7.77 11.99666667 0.0199071 0.836550837 0.541817171 2 2 2 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 2R 6700470 6700475 - 2R_6700470_6700475_- 1 1 1 0 CG45092 FBtr0344559|FBtr0344560|FBtr0344561 6700219|6700219|6699693 6705333|6705333|6705333 2R - 6700450 6700499 3'utr CG45092 FlyBase G20187.1 AAGCTCTAGCCTGTAAGACTATACTTGACTTGACTAATCGTAGCTAAGTA 22 6700475 0.942897846 4 21 165 0.966666667 1.462397998 0 0.272727273 0.466666667 22 1 0 29 2R:6700450-6700499 6 CG45092 FBtr0344561|FBtr0344560|FBtr0344559 6699693|6700219|6700219 6705333|6705333|6705333 TTGACT 6mer3-8 dme-miR-1012-3p 2R - 6700452 6700499 3'utr CG45092 FlyBase G15321.1 AAGCTCTAGCCTGTAAGACTATACTTGACTTGACTAATCGTAGCTAAG 16 6700475 0.696402898 6 16 111 1 1.342422681 0 0.3125 0.5 16 0 0 22 2R:6700452-6700499 6 18.5 2006 FBgn0266525 326.5166667 7.77 11.99666667 0.05665867 2.380952381 1.542095026 0 0 0 0.01 dme-miR-999-3p 7mer-A1 GTTAACA 2R 6705284 6705290 - 2R_6705284_6705290_- 0.823349562 0.823349562 0.823349562 0 CG45092 FBtr0344559|FBtr0344560|FBtr0344561 6700219|6700219|6699693 6705333|6705333|6705333 2R - 6705238 6705297 5'utr CG45092 FlyBase G20192.1 TTTATTCGTTAACAAAAGTTGGCTGTTGGCGTGCGGAGAGAGCATTGCCTGGACTACGAT 29 6705278 0.786943384 6 29 172 1 1.531478917 0.294117647 0.137931034 0.264705882 29 0 0 34 2R:6705238-6705297 7 CG45092 FBtr0344561|FBtr0344560|FBtr0344559 6699693|6700219|6700219 6705333|6705333|6705333 GTTAACA 7mer-A1 dme-miR-999-3p 2R - 6705238 6705299 5'utr CG45092 FlyBase G15325.1 AATTTATTCGTTAACAAAAGTTGGCTGTTGGCGTGCGGAGAGAGCATTGCCTGGACTACGAT 22 6705278 0.786941384 5 21 125 0.970588235 1.51851394 0.147058824 0.363636364 0.588235294 22 1 0 33 2R:6705238-6705299 7 19.5 2007 FBgn0266525 326.5166667 7.77 11.99666667 0.059721301 2.50965251 1.625451514 -12 -12 -12 0.01 dme-miR-305-5p 7mer-m8 AGTACAA 2R 6745772 6745778 + 2R_6745772_6745778_+ 0.643267584 0.643267584 0.643267584 0 phtf FBtr0086125 6745737 6746141 2R + 6745733 6745809 stop_codon phtf FlyBase G13370.1 AAGTAACCTATGCAAGGCGCAGACCCATCATATTTTTGTAGTACAACTTTTTAGAAACGCTTTAAGAGAAATCTAAC 18 6745769 0.798229395 7 15 139 0.85 1.230448921 0.05 0.111111111 0.2 18 3 0 17 2R:6745733-6745809 7 phtf FBtr0086125 6745737 6746141 AGTACAA 7mer-m8 dme-miR-305-5p 2R + 6745758 6745787 3'utr phtf FlyBase G10205.1 CATCATATTTTTGTAGTACAACTTTTTAGA 7 6745769 0.678057599 2 5 66 0.8 0.903089987 0 0.285714286 0.5 7 2 0 8 2R:6745758-6745787 7 7 2008 FBgn0028579 314.3333333 11.34333333 17.39 0.022269353 0.617102557 0.40253019 3 3 3 0.01 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 6748728 6748735 + 2R_6748728_6748735_+ 0.625364269 0.625364269 0.625364269 0 CG3267 FBtr0086126 6748653 6748954 2R + 6748663 6748801 3'utr CG3267 FlyBase G13376.1 TGTATGCTGGAGAAATTTAATCGGAGCGCATTTACAGGCATTTAATGCCTTTATTTCGAAACTGTTGCATTTATTAGCGTTAAGGCAATTGTTAACTGTGTAATGTACAACTGATTGTTTATTAGGAACAGGCGTGTGA 667 6748727 0.986861481 29 646 6148 0.967405476 2.393282651 0.159061278 0.134932534 0.247718383 667 23 2 742 2R:6748663-6748801 8 CG3267 FBtr0086126 6748653 6748954 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 6748671 6748795 3'utr CG3267 FlyBase G10209.1 GGAGAAATTTAATCGGAGCGCATTTACAGGCATTTAATGCCTTTATTTCGAAACTGTTGCATTTATTAGCGTTAAGGCAATTGTTAACTGTGTAATGTACAACTGATTGTTTATTAGGAACAGGC 483 6748727 0.795692984 22 465 4393 0.964238411 2.260071388 0.147019868 0.407867495 0.621192053 483 24 3 728 2R:6748671-6748795 8 538 2009 FBgn0042083 366.6133333 20.74 31.70666667 1.46748618 25.94021215 16.96804037 1 1 1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 6762254 6762260 - 2R_6762254_6762260_- 0.801970437 0.801970437 0.801970437 0 Epac FBtr0329850|FBtr0329850|FBtr0329850|FBtr0112636|FBtr0112636|FBtr0112636|FBtr0329851|FBtr0329851|FBtr0329851|FBtr0329849|FBtr0329849|FBtr0329849 6761911|6761911|6761911|6761911|6761911|6761911|6761911|6761911|6761911|6759713|6759713|6759713 6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646 2R - 6762230 6762279 3'utr Epac FlyBase G20210.1 AAAACTAAACTTGGACGTGTGTGATACTAAACATTTATAGGAGGCAACAT 46 6762262 0.896325008 7 46 287 1 1.740362689 0.054545455 0.195652174 0.327272727 46 0 0 55 2R:6762230-6762279 7 Epac FBtr0329850|FBtr0329850|FBtr0329850|FBtr0112636|FBtr0112636|FBtr0112636|FBtr0329851|FBtr0329851|FBtr0329851|FBtr0329849|FBtr0329849|FBtr0329849 6761911|6761911|6761911|6761911|6761911|6761911|6761911|6761911|6761911|6759713|6759713|6759713 6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 6762237 6762280 3'utr Epac FlyBase G15337.1 AAAAACTAAACTTGGACGTGTGTGATACTAAACATTTATAGGAG 40 6762262 0.776554013 7 40 258 1 1.880813592 0.052631579 0.575 0.776315789 40 0 0 76 2R:6762237-6762280 7 42 2010 FBgn0085421 11.33333333 0.29 0.44 3.705882353 144.8275862 95.45454545 2 2 2 0.01 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 6762343 6762350 - 2R_6762343_6762350_- 0.605654138 0.605654138 0.605654138 0 Epac FBtr0329850|FBtr0112636|FBtr0329851|FBtr0329849 6761911|6761911|6761911|6759713 6762646|6762646|6762646|6762646 2R - 6762307 6762422 3'utr Epac FlyBase G20211.1 AGGAACTATCTCAATCTTCTAATGAACTGAAACCCAAACGCATTTTAATGCAAACGAGAAACTTTTTGCTTTAGTACAAAACGATGGAAAAGATGGAAAACAATTTGAAATTCGGC 43 6762352 0.985434524 12 41 334 0.958333333 1.662757832 0.458333333 0.093023256 0.1875 43 2 0 46 2R:6762307-6762422 8 Epac FBtr0329850|FBtr0112636|FBtr0329851|FBtr0329849 6761911|6761911|6761911|6759713 6762646|6762646|6762646|6762646 AGTACAAA 8mer-A1 dme-miR-305-5p 2R - 6762325 6762422 3'utr Epac FlyBase G15338.1 AGGAACTATCTCAATCTTCTAATGAACTGAAACCCAAACGCATTTTAATGCAAACGAGAAACTTTTTGCTTTAGTACAAAACGATGGAAAAGATGGAA 39 6762352 0.739158666 9 33 270 0.898305085 1.72427587 0.372881356 0.358974359 0.576271186 39 6 0 53 2R:6762325-6762422 8 32.5 2011 FBgn0085421 11.33333333 0.29 0.44 2.867647059 112.0689655 73.86363636 2 2 2 0.01 dme-miR-1007-3p 8mer-A1 TGAGCTTA 2R 6762546 6762553 - 2R_6762546_6762553_- 0.625363359 0.625363359 0.625363359 0 Epac FBtr0329850|FBtr0112636|FBtr0329851|FBtr0329849 6761911|6761911|6761911|6759713 6762646|6762646|6762646|6762646 2R - 6762523 6762576 3'utr Epac FlyBase G20213.1 AACCGCAATTAGCTGCACAGTTATGAGCTTAGCCGGGTTGTTGTTGCTTTCCGA 31 6762553 0.82651848 4 31 272 1 1.556302501 0.083333333 0.161290323 0.277777778 31 0 0 36 2R:6762523-6762576 8 Epac FBtr0329850|FBtr0112636|FBtr0329851|FBtr0329849 6761911|6761911|6761911|6759713 6762646|6762646|6762646|6762646 TGAGCTTA 8mer-A1 dme-miR-1007-3p 2R - 6762528 6762575 3'utr Epac FlyBase G15340.1 ACCGCAATTAGCTGCACAGTTATGAGCTTAGCCGGGTTGTTGTTGCTT 27 6762553 0.818818673 4 26 227 0.973684211 1.267171728 0.236842105 0.296296296 0.5 27 0 1 37 2R:6762528-6762575 8 28.5 2012 FBgn0085421 11.33333333 0.29 0.44 2.514705882 98.27586207 64.77272727 0 0 0 0.01 dme-bantam-3p 6mer3-8 TGATCT 2R 6814355 6814360 + 2R_6814355_6814360_+ 1 0.971303883 0.985651942 0.020291207 koi FBtr0335515|FBtr0335517|FBtr0335516 6814313|6814313|6814313 6814812|6814812|6814812 2R + 6814349 6814473 3'utr koi FlyBase G13408.1 ATTTAGTGATCTGGTTGGGTGCAACGCCCCTTGCACTTAGACAAATATGAGAAACTTTCTTTATGAACAATATGAGTACAAAATAAAGCATTTGATCCGTTTTTTGTCCGTCTGCTTGACCCGCA 49 6814362 0.781396755 20 45 341 0.945454545 1.716003344 0.109090909 0.12244898 0.218181818 49 3 0 52 2R:6814349-6814473 6 koi FBtr0335516|FBtr0335515|FBtr0335517 6814313|6814313|6814313 6814812|6814812|6814812 TGATCT 6mer3-8 dme-bantam-3p 2R + 6814349 6814388 3'utr koi FlyBase G10229.1 ATTTAGTGATCTGGTTGGGTGCAACGCCCCTTGCACTTAG 16 6814361 0.661864172 6 12 121 0.785714286 1.342422681 0.107142857 0.625 0.785714286 16 6 0 22 2R:6814349-6814388 6 16 2013 FBgn0265003 944.7366667 44.58333333 68.22333333 0.016935936 0.358878505 0.234523868 -7 -6 -6.5 0.01 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 6814423 6814430 + 2R_6814423_6814430_+ 0.605654138 0.605654138 0.605654138 0 koi FBtr0335515|FBtr0335517|FBtr0335516 6814313|6814313|6814313 6814812|6814812|6814812 2R + 6814349 6814473 3'utr koi FlyBase G13408.1 ATTTAGTGATCTGGTTGGGTGCAACGCCCCTTGCACTTAGACAAATATGAGAAACTTTCTTTATGAACAATATGAGTACAAAATAAAGCATTTGATCCGTTTTTTGTCCGTCTGCTTGACCCGCA 49 6814421 0.781396755 20 45 341 0.945454545 1.716003344 0.109090909 0.12244898 0.218181818 49 3 0 52 2R:6814349-6814473 8 koi FBtr0335516|FBtr0335515|FBtr0335517 6814313|6814313|6814313 6814812|6814812|6814812 AGTACAAA 8mer-A1 dme-miR-305-5p 2R + 6814396 6814437 3'utr koi FlyBase G10230.1 TGAGAAACTTTCTTTATGAACAATATGAGTACAAAATAAAGC 14 6814421 0.698419374 5 12 70 0.769230769 1.301029996 0.192307692 0.571428571 0.769230769 14 6 0 20 2R:6814396-6814437 8 15 2014 FBgn0265003 944.7366667 44.58333333 68.22333333 0.01587744 0.336448598 0.219866126 2 2 2 0.01 dme-miR-999-3p 6mer2-7 GTTAAC 2R 6814649 6814654 + 2R_6814649_6814654_+ 1 1 1 0 koi FBtr0335515|FBtr0335517|FBtr0335516 6814313|6814313|6814313 6814812|6814812|6814812 2R + 6814626 6814696 3'utr koi FlyBase G13409.1 CAAATTGTAAAACTTTCGTAATCGTTAACTTCATTCTTGTCCAACAATTAGGGCCGTTATCCGTCTGGGTT 27 6814659 0.986717608 4 26 224 1 1.505149978 0.09375 0.185185185 0.3125 27 0 0 32 2R:6814626-6814696 6 koi FBtr0335516|FBtr0335515|FBtr0335517 6814313|6814313|6814313 6814812|6814812|6814812 GTTAAC 6mer2-7 dme-miR-999-3p 2R + 6814634 6814671 3'utr koi FlyBase G10232.1 AAAACTTTCGTAATCGTTAACTTCATTCTTGTCCAACA 15 6814659 0.857893319 4 15 128 1 1.301029996 0 0.2 0.4 15 0 0 20 2R:6814634-6814671 6 18.5 2015 FBgn0265003 944.7366667 44.58333333 68.22333333 0.019582176 0.414953271 0.271168222 -10 -10 -10 0.01 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 6817537 6817543 + 2R_6817537_6817543_+ 0.823349562 0.823349562 0.823349562 0 koi FBtr0335514|FBtr0335512|FBtr0335513 6817004|6817004|6817004 6818199|6818199|6818199 2R + 6817523 6817599 3'utr koi FlyBase G13417.1 ATGTTTAGAATCAAAGCTTTATGCTGATTGAGACGAGAAGTTGATCATGGCCTGGTCTCCAAGCGGAAGCTGTGTTT 14 6817566 0.883646681 9 12 96 0.888888889 1.204119983 0.444444444 0.285714286 0.444444444 14 2 0 16 2R:6817523-6817599 7 koi FBtr0335513|FBtr0335514|FBtr0335512 6817004|6817004|6817004 6818199|6818199|6818199 AGCTTTA 7mer-A1 dme-miR-79-3p 2R + 6817528 6817593 3'utr koi FlyBase G10239.1 TAGAATCAAAGCTTTATGCTGATTGAGACGAGAAGTTGATCATGGCCTGGTCTCCAAGCGGAAGCT 8 6817533 0.976158968 4 7 53 1 1.041392685 0.454545455 0.25 0.454545455 8 0 0 11 2R:6817528-6817593 7 3.5 2016 FBgn0265003 944.7366667 44.58333333 68.22333333 0.003704736 0.078504673 0.051302096 -29 4 -12.5 0.01 dme-miR-184-5p 6mer3-8 TGATAA 2R 6818073 6818078 + 2R_6818073_6818078_+ 1 1 1 0 koi FBtr0335514|FBtr0335512|FBtr0335513 6817004|6817004|6817004 6818199|6818199|6818199 2R + 6818016 6818150 3'utr koi FlyBase G13420.1 AAGTTTTCCTTACTTGTCGTATACGTAATATGTCTAAAGAGTGAACCCAAAAATAGTTGATAATTAAAAATATAGTTTTCTCTTGTTTCTATAAGTTTACTTAATTGGCTAAGTTTGTATCTACTTCCTGCGTTC 9 6818069 0.987388744 9 9 94 1 1 0.5 0.111111111 0.2 9 0 0 10 2R:6818016-6818150 6 koi FBtr0335513|FBtr0335514|FBtr0335512 6817004|6817004|6817004 6818199|6818199|6818199 TGATAA 6mer3-8 dme-miR-184-5p 2R + 6818009 6818074 3'utr koi FlyBase G10242.1 CTATTTCAAGTTTTCCTTACTTGTCGTATACGTAATATGTCTAAAGAGTGAACCCAAAAATAGTTG 6 6818069 0.976299506 4 5 42 0.9 0.954242509 0.2 0.666666667 0.8 6 1 0 9 2R:6818009-6818074 2 3 2017 FBgn0265003 944.7366667 44.58333333 68.22333333 0.003175488 0.06728972 0.043973225 4 4 4 0.01 dme-miR-1008-3p 7mer-A1 GCTGTGA 2R 6818188 6818194 + 2R_6818188_6818194_+ 0.823349562 0.823349562 0.823349562 0 koi FBtr0335514|FBtr0335512|FBtr0335513 6817004|6817004|6817004 6818199|6818199|6818199 2R + 6818161 6818199 3'utr koi FlyBase G13421.1 TTCACCATTTTTAACAATAAACACATTGCTGTGAAAAAA 79 6818186 0.764177338 3 79 334 1 1.973127854 0.010638298 0.164556962 0.29787234 79 0 0 94 2R:6818161-6818199 7 koi FBtr0335513|FBtr0335514|FBtr0335512 6817004|6817004|6817004 6818199|6818199|6818199 GCTGTGA 7mer-A1 dme-miR-1008-3p 2R + 6818154 6818199 3'utr koi FlyBase G10243.1 AAGGTTTTTCACCATTTTTAACAATAAACACATTGCTGTGAAAAAA 33 6818186 0.948439318 4 33 149 1 1.716003344 0.076923077 0.424242424 0.634615385 33 0 0 52 2R:6818154-6818199 7 56 2018 FBgn0265003 944.7366667 44.58333333 68.22333333 0.059275777 1.256074766 0.820833537 2 2 2 0.01 dme-miR-980-3p 6mer3-8 GGCAGC 2R 6876405 6876410 - 2R_6876405_6876410_- 1 1 1 0 Spn42Da FBtr0086205|FBtr0300336|FBtr0086200|FBtr0086202|FBtr0086199 6876151|6876151|6876151|6876151|6876151 6876596|6876596|6876596|6876596|6876596 2R - 6876339 6876435 3'utr Spn42Da FlyBase G20244.2 CAAGGACTCAACCGCTCTCTTCGCTGGCAGCATAAAGAAACTCTAAATAGGCAAACATACTAACCAATCCACAATGTTACTCGAGGGTCTCGTATTC 70 6876411 0.863574409 12 65 403 0.928571429 1.892094603 0.238095238 0.157142857 0.297619048 70 6 0 78 2R:6876339-6876435 6 Spn42Da FBtr0300336|FBtr0086205|FBtr0086199|FBtr0086202|FBtr0086200 6876151|6876151|6876151|6876151|6876151 6876596|6876596|6876596|6876596|6876596 GGCAGC 6mer3-8 dme-miR-980-3p 2R - 6876332 6876434 3'utr Spn42Da FlyBase G15365.1 AAGGACTCAACCGCTCTCTTCGCTGGCAGCATAAAGAAACTCTAAATAGGCAAACATACTAACCAATCCACAATGTTACTCGAGGGTCTCGTATTCATTTAAC 54 6876411 0.91980082 10 47 306 0.891566265 1.392110465 0.301204819 0.333333333 0.56626506 54 7 2 74 2R:6876332-6876434 6 40 2019 FBgn0265137 341.8233333 23.49666667 36.20333333 0.117019513 1.70236913 1.104870638 1 1 1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 6972183 6972189 - 2R_6972183_6972189_- 0.801967625 0.801970428 0.801969027 1.98E-06 Cyp6u1 FBtr0345011|FBtr0345011|FBtr0345011|FBtr0345802|FBtr0345802|FBtr0345802|FBtr0086185|FBtr0086185|FBtr0086185 6972110|6972110|6972110|6971994|6971994|6971994|6972110|6972110|6972110 6972304|6972304|6972304|6972304|6972304|6972304|6972304|6972304|6972304 2R - 6972168 6972228 3'utr Cyp6u1 FlyBase G20259.1 ATGCACCTTTTTCGTTGATTTTCCTAAGCTGTGGACTTGTGTGATAATGCTGACGATGACT 42 6972191 0.634960819 9 38 366 0.901960784 1.361727836 0.235294118 0.19047619 0.333333333 42 4 1 46 2R:6972168-6972228 7 Cyp6u1 FBtr0086185|FBtr0086185|FBtr0086185|FBtr0345011|FBtr0345011|FBtr0345011|FBtr0345802|FBtr0345802|FBtr0345802 6972110|6972110|6972110|6972110|6972110|6972110|6971994|6971994|6971994 6972304|6972304|6972304|6972304|6972304|6972304|6972304|6972304|6972304 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 6972162 6972215 3'utr Cyp6u1 FlyBase G15377.1 GTTGATTTTCCTAAGCTGTGGACTTGTGTGATAATGCTGACGATGACTTTTATA 12 6972192 0.983267933 7 12 91 1 1.146128036 0.571428571 0.166666667 0.285714286 12 0 0 14 2R:6972162-6972215 7 21 2020 FBgn0033121 218 13.62333333 20.59666667 0.096330275 1.541472963 1.019582457 2 3 2.5 0.01 dme-miR-252-5p 7mer-m8 GTACTTA 2R 6975796 6975802 - 2R_6975796_6975802_- 0.588299917 0.588299917 0.588299917 0 vimar FBtr0086183|FBtr0086182 6975283|6975283 6976552|6976552 2R - 6975747 6975862 3'utr vimar FlyBase G20266.1 ACAATAACAACAAATCGTGGTGATATCGCTAAATATATTTAATAAATGTATTTTATGATTGTACTTATAATTTTCAATCGACCTCTTTTAAACCGTTGCTGGCACAAACCAAAAAC 52 6975777 0.990545406 14 44 450 0.875 0.970036777 0.0625 0.192307692 0.34375 52 3 5 56 2R:6975747-6975862 7 vimar FBtr0086182|FBtr0086183 6975283|6975283 6976552|6976552 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 6975745 6975815 3'utr vimar FlyBase G15382.1 GTATTTTATGATTGTACTTATAATTTTCAATCGACCTCTTTTAAACCGTTGCTGGCACAAACCAAAAACGA 22 6975785 0.990150984 8 21 208 0.965517241 1.447158031 0.034482759 0.181818182 0.379310345 22 1 0 28 2R:6975745-6975815 7 6.5 2021 FBgn0022960 1005.046667 35.31333333 54.35 0.006467361 0.184066453 0.119595216 -25 -17 -21 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 2R 6976126 6976131 - 2R_6976126_6976131_- 1 1 1 0 vimar FBtr0086183|FBtr0086182 6975283|6975283 6976552|6976552 2R - 6976108 6976155 3'utr vimar FlyBase G20267.1 CAAAGCAACGATTCAGATGTAGACTTGACTGTAGTTTGGTAAGAAGAA 40 6976136 0.810725046 6 38 321 0.951219512 1.591064607 0.219512195 0.025 0.048780488 40 2 0 39 2R:6976108-6976155 6 vimar FBtr0086182|FBtr0086183 6975283|6975283 6976552|6976552 TTGACT 6mer3-8 dme-miR-1012-3p 2R - 6976096 6976151 3'utr vimar FlyBase G15384.1 GCAACGATTCAGATGTAGACTTGACTGTAGTTTGGTAAGAAGAAAGTGCAGATTCA 18 6976135 0.989496595 5 15 142 0.8 1.079181246 0.2 0.444444444 0.666666667 18 5 1 24 2R:6976096-6976151 6 29 2022 FBgn0022960 1005.046667 35.31333333 54.35 0.028854382 0.821219558 0.533578657 5 4 4.5 0.01 dme-miR-283-5p 6mer3-8 TGATAT 2R 6988812 6988817 + 2R_6988812_6988817_+ 1 1 1 0 CG17002 FBtr0303226|FBtr0086170|FBtr0303225 6988767|6988767|6988767 6988922|6988922|6988922 2R + 6988773 6988871 3'utr CG17002 FlyBase G13437.1 TAACCCCTAACCCCTTTTGTCGCTACGGAACTCGCTAACTGATATACTTACGATTTTAAATAGACATTACAACACTGACTACGCTTCCCACGTGAAGTC 119 6988808 0.959036675 9 114 764 0.963235294 1.8162413 0.014705882 0.134453782 0.242647059 119 4 1 131 2R:6988773-6988871 6 CG17002 FBtr0303225|FBtr0086170|FBtr0303226 6988767|6988767|6988767 6988922|6988922|6988922 TGATAT 6mer3-8 dme-miR-283-5p 2R + 6988771 6988823 3'utr CG17002 FlyBase G10252.1 TCTAACCCCTAACCCCTTTTGTCGCTACGGAACTCGCTAACTGATATACTTAC 51 6988808 0.849952045 5 50 312 0.971014493 1.826074803 0 0.31372549 0.492753623 51 2 0 67 2R:6988771-6988823 6 79 2023 FBgn0033122 348 25.2 38.42666667 0.227011494 3.134920635 2.055863983 4 4 4 0.01 dme-miR-276a-3p 6mer3-8 AGTTCC 2R 6993913 6993918 + 2R_6993913_6993918_+ 1 1 1 0 CG30159 FBtr0089760|FBtr0089761|FBtr0301713 6993846|6993846|6993846 6994306|6994306|6994306 2R + 6993902 6993946 3'utr CG30159 FlyBase G13441.1 ACCATTAACTTAGTTCCATGGCCAGCTACTCTCTATATTTTTATT 16 6993920 0.935077403 2 16 129 1 1.230448921 0 0.0625 0.117647059 16 0 0 17 2R:6993902-6993946 6 CG30159 FBtr0301713|FBtr0089761|FBtr0089760 6993846|6993846|6993846 6994306|6994306|6994306 AGTTCC 6mer3-8 dme-miR-276a-3p 2R + 6993786 6993941 stop_codon CG30159 FlyBase G10253.1 ACAACGAACTGAGGCAGCGCTGGTTGCCCAAGGAGAAGCTGCTGCCGGAGCTAGTGCGCTGATTGCGATCTCCCCGTTCCTGCCTCGATGCTATTTACAGGGCTACCTAGCTCGCCACCATTAACTTAGTTCCATGGCCAGCTACTCTCTATATTT 36 6993920 0.982390259 12 33 249 0.909090909 1.698970004 0.218181818 0.444444444 0.636363636 36 5 0 50 2R:6993786-6993941 6 13 2024 FBgn0050159 319.0933333 29.40333333 44.86 0.040740431 0.442126743 0.289790459 -7 -7 -7 0.01 dme-miR-282-5p 6mer3-8 AGAGGC 2R 7017790 7017795 + 2R_7017790_7017795_+ 1 1 1 0 Tsp42Ee FBtr0336871|FBtr0086180 7017760|7017760 7018362|7018362 2R + 7017741 7017872 stop_codon Tsp42Ee FlyBase G13454.1 AAGCGCCGGAACGCCTACTAAGCAATAGGTGTATCCATCAACTACATCTAGAGGCACACCCACATCCAGTAGCACACACACCTCACATTCTCATTAACTTTTACAGTCGTTGAACGCACATACACAACGGGA 56 7017789 0.968335448 12 50 220 0.909090909 1.146128036 0.051948052 0.25 0.454545455 56 3 4 70 2R:7017741-7017872 6 Tsp42Ee FBtr0086180|FBtr0336871 7017760|7017760 7018362|7018362 AGAGGC 6mer3-8 dme-miR-282-5p 2R + 7017772 7017950 3'utr Tsp42Ee FlyBase G10263.1 TATCCATCAACTACATCTAGAGGCACACCCACATCCAGTAGCACACACACCTCACATTCTCATTAACTTTTACAGTCGTTGAACGCACATACACAACGGGATACACAATAACACCTTGAAATAAGCCATTTAAGTGGATATTTGTCACGGAAAAACAAGAAGAAGCTTAGTTTAAGGCG 58 7017789 0.952836223 14 53 235 0.917525773 1.472268752 0.12371134 0.465517241 0.680412371 58 6 2 89 2R:7017772-7017950 6 32 2025 FBgn0029506 12272.56 1084.96 1657.746667 0.002607443 0.029494175 0.019303311 1 1 1 0.01 dme-miR-12-5p 8mer-A1 AATACTCA 2R 7027789 7027796 + 2R_7027789_7027796_+ 0.643927113 0.643927113 0.643927113 0 Tsp42Ef FBtr0089023 7027772 7028082 2R + 7027680 7027826 lincRNA_intron-lincRNA_exon Tsp42Ef FlyBase G13466.1 AAAATGTCCCCATCTCTTGCAGCTCCTGCTGAGTGTCATCTCTTGCCGCCTGTGCAACAGCATTCGCAACGATGCTCGACGTTCTTACTTTTAGACAGTGAAACCTGAAAATACTCAACTGGGATTGGCAGTCGACTTGTTAAATTT 51 7027805 0.972489007 20 50 298 0.968253968 1.785329835 0.206349206 0.176470588 0.333333333 51 2 0 61 2R:7027680-7027826 8 Tsp42Ef FBtr0089023 7027772 7028082 AATACTCA 8mer-A1 dme-miR-12-5p 2R + 7027705 7027823 stop_codon Tsp42Ef FlyBase G10270.1 CTGCTGAGTGTCATCTCTTGCCGCCTGTGCAACAGCATTCGCAACGATGCTCGACGTTCTTACTTTTAGACAGTGAAACCTGAAAATACTCAACTGGGATTGGCAGTCGACTTGTTAAA 29 7027805 0.89585053 11 29 152 1 1.591064607 0.102564103 0.206896552 0.41025641 29 0 0 39 2R:7027705-7027823 8 21.5 2026 FBgn0033127 637 57.73333333 88.10666667 0.033751962 0.372401848 0.244022397 -16 -16 -16 0.01 dme-miR-263a-5p 6mer3-8 GTGCCA 2R 7058133 7058138 - 2R_7058133_7058138_- 1 1 1 0 pgant3 FBtr0089061 7057652 7058157 2R - 7058076 7058195 stop_codon pgant3 FlyBase G20282.1 AGAAGTGGGGCTTCATACCACTGCCATGGCGCATGTAGAGAGTAGGATGTCATGCCGGTGCCAGGACATTTAATCCAATAACCCTGCCAGCAACTTTTTAACGCAATGTGATATTTATTG 18 7058138 0.955412977 12 17 96 0.95 0.977723605 0.2 0.111111111 0.2 18 0 1 19 2R:7058076-7058195 6 pgant3 FBtr0089061 7057652 7058157 GTGCCA 6mer3-8 dme-miR-263a-5p 2R - 7058105 7058155 3'utr pgant3 FlyBase G15392.1 AGTAGGATGTCATGCCGGTGCCAGGACATTTAATCCAATAACCCTGCCAGC 6 7058142 0.971975001 4 5 29 0.909090909 1 0.181818182 0.666666667 0.818181818 6 1 0 10 2R:7058105-7058155 6 5 2027 FBgn0027558 471.5666667 19.75 30.18 0.010602955 0.253164557 0.165672631 0 4 2 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 2R 7272832 7272837 - 2R_7272832_7272837_- 1 1 1 0 Br140 FBtr0345370|FBtr0089021 7272273|7272531 7273271|7273271 2R - 7272789 7272844 3'utr Br140 FlyBase G20296.1 ATGTTTAAGTTAAATAGTTTTAAGCTCTCCTACTGTTAAGCCCGGAATCAACATTA 18 7272833 0.998449804 6 7 158 0.375 0.653212514 0.041666667 0.166666667 0.375 18 14 1 9 2R:7272789-7272844 6 Br140 FBtr0089021|FBtr0345370 7272531|7272273 7273271|7273271 AGTTAA 6mer3-8 dme-miR-999-3p 2R - 7272784 7272835 3'utr Br140 FlyBase G15401.1 TTAAATAGTTTTAAGCTCTCCTACTGTTAAGCCCGGAATCAACATTATAAGC 20 7272826 0.995949793 9 10 174 0.448275862 0.636822098 0.034482759 0.25 0.482758621 20 14 2 13 2R:7272784-7272835 4 13.5 2028 FBgn0033155 560.6533333 12.28666667 18.82333333 0.024079051 1.098752035 0.717194971 -4 -11 -7.5 0.01 dme-miR-12-5p 6mer2-7 ATACTC 2R 7273157 7273162 - 2R_7273157_7273162_- 1 1 1 0 Br140 FBtr0345370|FBtr0089021 7272273|7272531 7273271|7273271 2R - 7273074 7273308 stop_codon Br140 FlyBase G20299.1 CGACTTGGAGGGCCAAGGACCCGATCCGATCATGTGAAAGCTGATGGCCCGATTGCAACTGTAGGCGCCGCTCGAAAGAATTCAGCCATTTAGTTAGCTCCCCCACAAGGGATCGCCGTATTTTTATATCTCGTTGTTGTTACTTGATACTCGAAGATGACGCAGTTGAAGAAGGCCCTCCATTAGAGTATTTCGTTGGCGAATTTCCAATTTGCACTGCAAGTGTCTTTAATTT 88 7273164 0.98305302 22 84 635 0.963302752 2.021189299 0.412844037 0.215909091 0.366972477 88 4 0 105 2R:7273074-7273308 6 Br140 FBtr0089021|FBtr0345370 7272531|7272273 7273271|7273271 ATACTC 6mer2-7 dme-miR-12-5p 2R - 7273107 7273183 3'utr Br140 FlyBase G15403.1 ATATCTCGTTGTTGTTACTTGATACTCGAAGATGACGCAGTTGAAGAAGGCCCTCCATTAGAGTATTTCGTTGGCGA 58 7273164 0.768418041 8 52 450 0.926829268 1.278753601 0.353658537 0.293103448 0.5 58 3 3 76 2R:7273107-7273183 6 45 2029 FBgn0033155 560.6533333 12.28666667 18.82333333 0.080263502 3.662506782 2.390649903 2 2 2 0.01 dme-bantam-3p 6mer3-8 TGATCT 2R 7319607 7319612 - 2R_7319607_7319612_- 1 1 1 0 Dscam1 FBtr0111083|FBtr0111055|FBtr0111050|FBtr0111066|FBtr0111070|FBtr0111077|FBtr0111100|FBtr0111076|FBtr0111060|FBtr0306779|FBtr0089019|FBtr0111078|FBtr0089020|FBtr0111058|FBtr0111052|FBtr0111087|FBtr0306786|FBtr0306780|FBtr0111085|FBtr0111065|FBtr0111099|FBtr0306772|FBtr0111097|FBtr0306774|FBtr0306783|FBtr0111057|FBtr0306771|FBtr0111061|FBtr0089018|FBtr0111102|FBtr0111068|FBtr0306784|FBtr0306777|FBtr0306778|FBtr0111101|FBtr0306787|FBtr0111082|FBtr0111074|FBtr0111098|FBtr0111096|FBtr0306782|FBtr0111073|FBtr0111088|FBtr0334801|FBtr0111064|FBtr0111062|FBtr0111049|FBtr0111072|FBtr0111084|FBtr0111081|FBtr0111089|FBtr0111071|FBtr0306770|FBtr0111092|FBtr0111051|FBtr0306773|FBtr0111069|FBtr0111063|FBtr0306781|FBtr0306776|FBtr0111053|FBtr0111080|FBtr0111059|FBtr0111056|FBtr0111075|FBtr0089016|FBtr0306769|FBtr0306775|FBtr0111067|FBtr0111079|FBtr0306767|FBtr0111094|FBtr0306768|FBtr0306785|FBtr0111054 7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7317922|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552 7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320675|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682 2R - 7319560 7319710 3'utr Dscam1 FlyBase G20310.1 ACGATTTATTAAACCAATTCTGATATAGACCGTTCTGAACATGAGTTATACGCATTTGAAGCTTTAAGAGAACCTGAAATTGTTTATTTCACTTCATTTGATCTATCCTAAGTTATTAGTTCATAAGTTGCTAAATATATGATTTTGATTT 150 7319613 0.991665558 26 144 1585 0.966666667 1.763427994 0.055555556 0.146666667 0.288888889 150 4 2 174 2R:7319560-7319710 6 Dscam1 FBtr0306787|FBtr0111101|FBtr0111074|FBtr0111082|FBtr0111102|FBtr0111063|FBtr0306778|FBtr0111053|FBtr0306777|FBtr0111068|FBtr0306771|FBtr0111057|FBtr0089018|FBtr0111061|FBtr0089016|FBtr0111099|FBtr0111079|FBtr0306783|FBtr0306774|FBtr0111097|FBtr0306780|FBtr0306786|FBtr0111065|FBtr0111085|FBtr0089020|FBtr0306782|FBtr0111078|FBtr0089019|FBtr0111052|FBtr0111058|FBtr0111076|FBtr0111100|FBtr0306779|FBtr0111060|FBtr0111050|FBtr0111055|FBtr0111084|FBtr0111083|FBtr0111077|FBtr0111066|FBtr0111094|FBtr0306767|FBtr0111054|FBtr0306785|FBtr0306768|FBtr0306775|FBtr0306769|FBtr0306772|FBtr0111067|FBtr0111080|FBtr0111075|FBtr0111056|FBtr0111059|FBtr0306781|FBtr0111069|FBtr0306776|FBtr0306784|FBtr0111092|FBtr0306770|FBtr0111071|FBtr0306773|FBtr0111051|FBtr0111081|FBtr0111072|FBtr0111089|FBtr0111070|FBtr0111064|FBtr0334801|FBtr0111088|FBtr0111049|FBtr0111062|FBtr0111096|FBtr0111098|FBtr0111087|FBtr0111073 7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7317922|7319552|7319552|7319552|7319552|7319552|7319552|7319552 7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320675|7320682|7320682|7320682|7320682|7320682|7320682|7320682 TGATCT 6mer3-8 dme-bantam-3p 2R - 7319554 7319697 3'utr Dscam1 FlyBase G15417.1 CCAATTCTGATATAGACCGTTCTGAACATGAGTTATACGCATTTGAAGCTTTAAGAGAACCTGAAATTGTTTATTTCACTTCATTTGATCTATCCTAAGTTATTAGTTCATAAGTTGCTAAATATATGATTTTGATTTTATTTT 86 7319613 0.990918916 18 83 870 0.946564885 2.093421685 0.076335878 0.348837209 0.572519084 86 7 0 124 2R:7319554-7319697 6 91.5 2030 FBgn0033159 794.49 12.18 18.55333333 0.115168221 7.512315271 4.931728351 1 1 1 0.01 dme-miR-283-5p 6mer3-8 TGATAT 2R 7320075 7320080 - 2R_7320075_7320080_- 1 1 1 0 Dscam1 FBtr0111083|FBtr0111055|FBtr0111050|FBtr0111066|FBtr0111070|FBtr0111077|FBtr0111100|FBtr0111076|FBtr0111060|FBtr0306779|FBtr0089019|FBtr0111078|FBtr0089020|FBtr0111058|FBtr0111052|FBtr0111087|FBtr0306786|FBtr0306780|FBtr0111085|FBtr0111065|FBtr0111099|FBtr0306772|FBtr0111097|FBtr0306774|FBtr0306783|FBtr0111057|FBtr0306771|FBtr0111061|FBtr0089018|FBtr0111102|FBtr0111068|FBtr0306784|FBtr0306777|FBtr0306778|FBtr0111101|FBtr0306787|FBtr0111082|FBtr0111074|FBtr0111098|FBtr0111096|FBtr0306782|FBtr0111073|FBtr0111088|FBtr0334801|FBtr0111064|FBtr0111062|FBtr0111049|FBtr0111072|FBtr0111084|FBtr0111081|FBtr0111089|FBtr0111071|FBtr0306770|FBtr0111092|FBtr0111051|FBtr0306773|FBtr0111069|FBtr0111063|FBtr0306781|FBtr0306776|FBtr0111053|FBtr0111080|FBtr0111059|FBtr0111056|FBtr0111075|FBtr0089016|FBtr0306769|FBtr0306775|FBtr0111067|FBtr0111079|FBtr0306767|FBtr0111094|FBtr0306768|FBtr0306785|FBtr0111054 7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7317922|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552 7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320675|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682 2R - 7320027 7320402 3'utr Dscam1 FlyBase G20312.1 ATATAAGTACATTCAATGGATAACTACTATAAGAGAGTGCTGGAGACACTGAAGGAAATTACTCAAGTTATTCGAGAGGAACAGAAAACGAAATCTCAAGATCAAGATCATACTTACGTATTCGAACTAATTTTCAATAATGTACTTTAGTTTTAAGCGGTGTCTACCGAAATATCAGAGCAACAGCAACTGAGATGGATTCTTGTGTGTAAGAGGAGATGATTCGAAATCTGTTTGTGTAAACTTTTGCCATCTATGCCAGGAGCAGAAAACTCATCCTTTGCCTAGCCTAAGTCAAAGTCATAATATTAACTCGTCTAATTGATATATTTAGTCGTAACATATGCGTAATATGTATGATTTCTTCCTATGCATT 198 7320085 0.935664772 64 181 1332 0.918803419 1.48734042 0.153846154 0.146464646 0.277777778 198 13 6 215 2R:7320027-7320402 6 Dscam1 FBtr0306787|FBtr0111101|FBtr0111074|FBtr0111082|FBtr0111102|FBtr0111063|FBtr0306778|FBtr0111053|FBtr0306777|FBtr0111068|FBtr0306771|FBtr0111057|FBtr0089018|FBtr0111061|FBtr0089016|FBtr0111099|FBtr0111079|FBtr0306783|FBtr0306774|FBtr0111097|FBtr0306780|FBtr0306786|FBtr0111065|FBtr0111085|FBtr0089020|FBtr0306782|FBtr0111078|FBtr0089019|FBtr0111052|FBtr0111058|FBtr0111076|FBtr0111100|FBtr0306779|FBtr0111060|FBtr0111050|FBtr0111055|FBtr0111084|FBtr0111083|FBtr0111077|FBtr0111066|FBtr0111094|FBtr0306767|FBtr0111054|FBtr0306785|FBtr0306768|FBtr0306775|FBtr0306769|FBtr0306772|FBtr0111067|FBtr0111080|FBtr0111075|FBtr0111056|FBtr0111059|FBtr0306781|FBtr0111069|FBtr0306776|FBtr0306784|FBtr0111092|FBtr0306770|FBtr0111071|FBtr0306773|FBtr0111051|FBtr0111081|FBtr0111072|FBtr0111089|FBtr0111070|FBtr0111064|FBtr0334801|FBtr0111088|FBtr0111049|FBtr0111062|FBtr0111096|FBtr0111098|FBtr0111087|FBtr0111073 7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7317922|7319552|7319552|7319552|7319552|7319552|7319552|7319552 7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320675|7320682|7320682|7320682|7320682|7320682|7320682|7320682 TGATAT 6mer3-8 dme-miR-283-5p 2R - 7320003 7320312 3'utr Dscam1 FlyBase G15420.1 AAATCTCAAGATCAAGATCATACTTACGTATTCGAACTAATTTTCAATAATGTACTTTAGTTTTAAGCGGTGTCTACCGAAATATCAGAGCAACAGCAACTGAGATGGATTCTTGTGTGTAAGAGGAGATGATTCGAAATCTGTTTGTGTAAACTTTTGCCATCTATGCCAGGAGCAGAAAACTCATCCTTTGCCTAGCCTAAGTCAAAGTCATAATATTAACTCGTCTAATTGATATATTTAGTCGTAACATATGCGTAATATGTATGATTTCTTCCTATGCATTTTATAATTCGTATGGACAGCGCAC 79 7320082 0.985156236 37 72 585 0.917355372 1.443262987 0.123966942 0.417721519 0.619834711 79 7 3 111 2R:7320003-7320312 6 18 2031 FBgn0033159 794.49 12.18 18.55333333 0.022656043 1.477832512 0.970176069 5 2 3.5 0.01 dme-miR-263a-5p 6mer2-7 TGCCAT 2R 7320150 7320155 - 2R_7320150_7320155_- 1 1 1 0 Dscam1 FBtr0111083|FBtr0111055|FBtr0111050|FBtr0111066|FBtr0111070|FBtr0111077|FBtr0111100|FBtr0111076|FBtr0111060|FBtr0306779|FBtr0089019|FBtr0111078|FBtr0089020|FBtr0111058|FBtr0111052|FBtr0111087|FBtr0306786|FBtr0306780|FBtr0111085|FBtr0111065|FBtr0111099|FBtr0306772|FBtr0111097|FBtr0306774|FBtr0306783|FBtr0111057|FBtr0306771|FBtr0111061|FBtr0089018|FBtr0111102|FBtr0111068|FBtr0306784|FBtr0306777|FBtr0306778|FBtr0111101|FBtr0306787|FBtr0111082|FBtr0111074|FBtr0111098|FBtr0111096|FBtr0306782|FBtr0111073|FBtr0111088|FBtr0334801|FBtr0111064|FBtr0111062|FBtr0111049|FBtr0111072|FBtr0111084|FBtr0111081|FBtr0111089|FBtr0111071|FBtr0306770|FBtr0111092|FBtr0111051|FBtr0306773|FBtr0111069|FBtr0111063|FBtr0306781|FBtr0306776|FBtr0111053|FBtr0111080|FBtr0111059|FBtr0111056|FBtr0111075|FBtr0089016|FBtr0306769|FBtr0306775|FBtr0111067|FBtr0111079|FBtr0306767|FBtr0111094|FBtr0306768|FBtr0306785|FBtr0111054 7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7317922|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552 7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320675|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682 2R - 7320027 7320402 3'utr Dscam1 FlyBase G20312.1 ATATAAGTACATTCAATGGATAACTACTATAAGAGAGTGCTGGAGACACTGAAGGAAATTACTCAAGTTATTCGAGAGGAACAGAAAACGAAATCTCAAGATCAAGATCATACTTACGTATTCGAACTAATTTTCAATAATGTACTTTAGTTTTAAGCGGTGTCTACCGAAATATCAGAGCAACAGCAACTGAGATGGATTCTTGTGTGTAAGAGGAGATGATTCGAAATCTGTTTGTGTAAACTTTTGCCATCTATGCCAGGAGCAGAAAACTCATCCTTTGCCTAGCCTAAGTCAAAGTCATAATATTAACTCGTCTAATTGATATATTTAGTCGTAACATATGCGTAATATGTATGATTTCTTCCTATGCATT 198 7320146 0.935664772 64 181 1332 0.918803419 1.48734042 0.153846154 0.146464646 0.277777778 198 13 6 215 2R:7320027-7320402 6 Dscam1 FBtr0306787|FBtr0111101|FBtr0111074|FBtr0111082|FBtr0111102|FBtr0111063|FBtr0306778|FBtr0111053|FBtr0306777|FBtr0111068|FBtr0306771|FBtr0111057|FBtr0089018|FBtr0111061|FBtr0089016|FBtr0111099|FBtr0111079|FBtr0306783|FBtr0306774|FBtr0111097|FBtr0306780|FBtr0306786|FBtr0111065|FBtr0111085|FBtr0089020|FBtr0306782|FBtr0111078|FBtr0089019|FBtr0111052|FBtr0111058|FBtr0111076|FBtr0111100|FBtr0306779|FBtr0111060|FBtr0111050|FBtr0111055|FBtr0111084|FBtr0111083|FBtr0111077|FBtr0111066|FBtr0111094|FBtr0306767|FBtr0111054|FBtr0306785|FBtr0306768|FBtr0306775|FBtr0306769|FBtr0306772|FBtr0111067|FBtr0111080|FBtr0111075|FBtr0111056|FBtr0111059|FBtr0306781|FBtr0111069|FBtr0306776|FBtr0306784|FBtr0111092|FBtr0306770|FBtr0111071|FBtr0306773|FBtr0111051|FBtr0111081|FBtr0111072|FBtr0111089|FBtr0111070|FBtr0111064|FBtr0334801|FBtr0111088|FBtr0111049|FBtr0111062|FBtr0111096|FBtr0111098|FBtr0111087|FBtr0111073 7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7317922|7319552|7319552|7319552|7319552|7319552|7319552|7319552 7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320675|7320682|7320682|7320682|7320682|7320682|7320682|7320682 TGCCAT 6mer2-7 dme-miR-263a-5p 2R - 7320003 7320312 3'utr Dscam1 FlyBase G15420.1 AAATCTCAAGATCAAGATCATACTTACGTATTCGAACTAATTTTCAATAATGTACTTTAGTTTTAAGCGGTGTCTACCGAAATATCAGAGCAACAGCAACTGAGATGGATTCTTGTGTGTAAGAGGAGATGATTCGAAATCTGTTTGTGTAAACTTTTGCCATCTATGCCAGGAGCAGAAAACTCATCCTTTGCCTAGCCTAAGTCAAAGTCATAATATTAACTCGTCTAATTGATATATTTAGTCGTAACATATGCGTAATATGTATGATTTCTTCCTATGCATTTTATAATTCGTATGGACAGCGCAC 79 7320146 0.985156236 37 72 585 0.917355372 1.443262987 0.123966942 0.417721519 0.619834711 79 7 3 111 2R:7320003-7320312 6 23.5 2032 FBgn0033159 794.49 12.18 18.55333333 0.029578723 1.929392447 1.266618757 -9 -9 -9 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 2R 7320640 7320645 - 2R_7320640_7320645_- 1 1 1 0 Dscam1 FBtr0111083|FBtr0111055|FBtr0111050|FBtr0111066|FBtr0111070|FBtr0111077|FBtr0111100|FBtr0111076|FBtr0111060|FBtr0306779|FBtr0089019|FBtr0111078|FBtr0089020|FBtr0111058|FBtr0111052|FBtr0111087|FBtr0306786|FBtr0306780|FBtr0111085|FBtr0111065|FBtr0111099|FBtr0306772|FBtr0111097|FBtr0306774|FBtr0306783|FBtr0111057|FBtr0306771|FBtr0111061|FBtr0089018|FBtr0111102|FBtr0111068|FBtr0306784|FBtr0306777|FBtr0306778|FBtr0111101|FBtr0306787|FBtr0111082|FBtr0111074|FBtr0111098|FBtr0111096|FBtr0306782|FBtr0111073|FBtr0111088|FBtr0334801|FBtr0111064|FBtr0111062|FBtr0111049|FBtr0111072|FBtr0111084|FBtr0111081|FBtr0111089|FBtr0111071|FBtr0306770|FBtr0111092|FBtr0111051|FBtr0306773|FBtr0111069|FBtr0111063|FBtr0306781|FBtr0306776|FBtr0111053|FBtr0111080|FBtr0111059|FBtr0111056|FBtr0111075|FBtr0089016|FBtr0306769|FBtr0306775|FBtr0111067|FBtr0111079|FBtr0306767|FBtr0111094|FBtr0306768|FBtr0306785|FBtr0111054 7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7317922|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552 7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320675|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682 2R - 7320601 7320707 stop_codon Dscam1 FlyBase G20314.1 AGCCTACGATACTATGGCAGTGTAATTTGTAAGCGCCCTCTGCGGCGGTGGGCGTGGCATTTTAGCTTAGTGTTTTAGGTGCATGAAGTGCGTGGGAGTTGAATGAC 32 7320646 0.815431043 14 30 234 0.914285714 1.505149978 0.228571429 0.09375 0.171428571 32 3 0 32 2R:7320601-7320707 6 Dscam1 FBtr0306787|FBtr0111101|FBtr0111074|FBtr0111082|FBtr0111102|FBtr0111063|FBtr0306778|FBtr0111053|FBtr0306777|FBtr0111068|FBtr0306771|FBtr0111057|FBtr0089018|FBtr0111061|FBtr0089016|FBtr0111099|FBtr0111079|FBtr0306783|FBtr0306774|FBtr0111097|FBtr0306780|FBtr0306786|FBtr0111065|FBtr0111085|FBtr0089020|FBtr0306782|FBtr0111078|FBtr0089019|FBtr0111052|FBtr0111058|FBtr0111076|FBtr0111100|FBtr0306779|FBtr0111060|FBtr0111050|FBtr0111055|FBtr0111084|FBtr0111083|FBtr0111077|FBtr0111066|FBtr0111094|FBtr0306767|FBtr0111054|FBtr0306785|FBtr0306768|FBtr0306775|FBtr0306769|FBtr0306772|FBtr0111067|FBtr0111080|FBtr0111075|FBtr0111056|FBtr0111059|FBtr0306781|FBtr0111069|FBtr0306776|FBtr0306784|FBtr0111092|FBtr0306770|FBtr0111071|FBtr0306773|FBtr0111051|FBtr0111081|FBtr0111072|FBtr0111089|FBtr0111070|FBtr0111064|FBtr0334801|FBtr0111088|FBtr0111049|FBtr0111062|FBtr0111096|FBtr0111098|FBtr0111087|FBtr0111073 7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7317922|7319552|7319552|7319552|7319552|7319552|7319552|7319552 7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320675|7320682|7320682|7320682|7320682|7320682|7320682|7320682 TAGCTT 6mer3-8 dme-miR-79-3p 2R - 7320592 7320708 stop_codon Dscam1 FlyBase G15423.1 CAGCCTACGATACTATGGCAGTGTAATTTGTAAGCGCCCTCTGCGGCGGTGGGCGTGGCATTTTAGCTTAGTGTTTTAGGTGCATGAAGTGCGTGGGAGTTGAATGACACTTAGAGA 24 7320646 0.974802603 12 22 136 1 1.602059991 0.325 0.5 0.7 24 0 0 40 2R:7320592-7320708 6 11 2033 FBgn0033159 794.49 12.18 18.55333333 0.01384536 0.903119869 0.592885375 1 1 1 0.01 dme-miR-7-5p 7mer-m8 GTCTTCC 2R 7382570 7382576 - 2R_7382570_7382576_- 0.705950313 0.705950313 0.705950313 0 cos FBtr0089015|FBtr0336916 7382174|7382521 7383196|7383196 2R - 7382528 7382609 3'utr cos FlyBase G20350.1 TGTTAGTTTTAGCTTAGTTGTAAACACTATTGTGTCTTCCCTCGAATTTTAATTGACCTTCGATACCAATTACAACATACGT 35 7382578 0.847022236 10 35 328 1 1.633468456 0.162790698 0.171428571 0.325581395 35 0 0 43 2R:7382528-7382609 7 cos FBtr0089015|FBtr0336916 7382174|7382521 7383196|7383196 GTCTTCC 7mer-m8 dme-miR-7-5p 2R - 7382547 7382600 3'utr cos FlyBase G15442.1 TAGCTTAGTTGTAAACACTATTGTGTCTTCCCTCGAATTTTAATTGACCTTCGA 22 7382577 0.699560207 5 18 214 0.827586207 1.380211242 0.103448276 0.318181818 0.482758621 22 5 0 24 2R:7382547-7382600 7 25 2034 FBgn0000352 545 14.08 21.54666667 0.04587156 1.775568182 1.160272277 2 1 1.5 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2R 7398051 7398056 - 2R_7398051_7398056_- 1 1 1 0 Eaf FBtr0089007 7396848 7398395 2R - 7398038 7398076 3'utr Eaf FlyBase G20378.1 GATTATGTAAAACTTGTTGGAAGACTAATAATATATCGC 15 7398059 0.803867266 4 13 112 0.875 1.146128036 0.125 0.066666667 0.125 15 2 0 14 2R:7398038-7398076 6 Eaf FBtr0089007 7396848 7398395 AAGACT 6mer3-8 dme-miR-14-3p 2R - 7398038 7398078 3'utr Eaf FlyBase G15457.1 ATGATTATGTAAAACTTGTTGGAAGACTAATAATATATCGC 14 7398059 0.822473815 2 14 111 1 1.255272505 0.166666667 0.285714286 0.444444444 14 0 0 18 2R:7398038-7398078 6 14.5 2035 FBgn0033166 365.6833333 12.62666667 19.28666667 0.039651793 1.148363252 0.751814725 3 3 3 0.01 dme-miR-283-5p 8mer-m1 TGATATTT 2R 7398319 7398326 - 2R_7398319_7398326_- 0.555593841 0.555593841 0.555593841 0 Eaf FBtr0089009|FBtr0089006|FBtr0089008|FBtr0089007 7398224|7398224|7398224|7396848 7398395|7398395|7398395|7398395 2R - 7398226 7398344 3'utr Eaf FlyBase G20379.1 AAGAGCAACAACAATTATTGATATTTTGTCTATATGCGTGTAATTAATTTGTAATTATTGAGAGGTGATTTTACTTGCTAGTGAAATTTTTTAAAATAAATTCTTATTTCTACACCACG 54 7398330 0.989776384 16 52 517 0.968253968 1.785329835 0.365079365 0.148148148 0.26984127 54 2 0 61 2R:7398226-7398344 8 Eaf FBtr0089008|FBtr0089007|FBtr0089009|FBtr0089006 7398224|7396848|7398224|7398224 7398395|7398395|7398395|7398395 TGATATTT 8mer-m1 dme-miR-283-5p 2R - 7398306 7398421 stop_codon Eaf FlyBase G15459.1 ATTCGTCCGACGATGACGACGACTAGCTGTTTAAAGTTTGATCTTATTTGCCTTCTTTTGACTAAACCAACGACAACAAGAGCAACAACAATTATTGATATTTTGTCTATATGCGT 66 7398329 0.97971807 13 64 588 0.978723404 1.963787827 0.234042553 0.333333333 0.531914894 66 2 0 92 2R:7398306-7398421 8 17.5 2036 FBgn0033166 365.6833333 12.62666667 19.28666667 0.047855613 1.385955649 0.907362599 4 3 3.5 0.01 dme-miR-252-5p 7mer-m8 GTACTTA 2R 7444798 7444804 - 2R_7444798_7444804_- 0.588299917 0.588299917 0.588299917 0 kappaB-Ras FBtr0299801|FBtr0089002 7443822|7443822 7445025|7445025 2R - 7444781 7444879 5'utr kappaB-Ras FlyBase G20390.1 GTATTGATCCATTTAGAGTCTACTTGCCTTGTATTAACTGTTGTGCTTTAATGTGGGCCAGAGCCCAAGCCACTTGTACTTATGTCTCTTTGTGTGTGT 20 7444805 0.855629075 10 19 185 1 1.342422681 0.227272727 0.05 0.136363636 20 0 0 22 2R:7444781-7444879 7 kappaB-Ras FBtr0089002|FBtr0299801 7443822|7443822 7445025|7445025 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 7444792 7444845 5'utr kappaB-Ras FlyBase G15466.1 TAACTGTTGTGCTTTAATGTGGGCCAGAGCCCAAGCCACTTGTACTTATGTCTC 6 7444805 0.976794131 2 6 44 1 0.954242509 0.111111111 0.333333333 0.555555556 6 0 0 9 2R:7444792-7444845 7 6.5 2037 FBgn0040513 68.97 4.683333333 7.146666667 0.094243874 1.387900356 0.909514925 1 1 1 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT 2R 7449262 7449267 + 2R_7449262_7449267_+ 0.999995768 0.997675631 0.998835699 0.001640629 CG11125 FBtr0336911|FBtr0088974 7449165|7449165 7449995|7449415 2R + 7449195 7449277 3'utr CG11125 FlyBase G13525.1 ATTAAAGCATTCCATCGACTGACTGACCGAGCGAGCTACTGGAATCTTGGATTTGCAAAACACGCGTGTTCCTTTCAACCATG 49 7449261 0.797983302 11 42 210 0.881355932 1.238882089 0.406779661 0.183673469 0.322033898 49 5 2 52 2R:7449195-7449277 6 CG11125 FBtr0088974|FBtr0336911 7449165|7449165 7449415|7449995 GTTCCT 6mer2-7 dme-miR-276a-3p 2R + 7449195 7449277 3'utr CG11125 FlyBase G10307.1 ATTAAAGCATTCCATCGACTGACTGACCGAGCGAGCTACTGGAATCTTGGATTTGCAAAACACGCGTGTTCCTTTCAACCATG 31 7449267 0.620719046 13 27 150 0.921568627 1.371067862 0.411764706 0.387096774 0.62745098 31 3 1 47 2R:7449195-7449277 6 9.5 2038 FBgn0033174 169.62 12.60333333 19.33 0.056007546 0.753768844 0.491464046 1 -5 -2 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT 2R 7449815 7449820 + 2R_7449815_7449820_+ 0.999998184 1 0.999999092 1.27E-06 CG11125 FBtr0336911 7449165 7449995 2R + 7449752 7449851 3'utr CG11125 FlyBase G13527.1 TCCATGTCGATGGGCATCAATTTGGCAACTGCAGTGCGAAAAACAATCGGATAAGACTTTGCTGTTCCTTTGCGAGCATGATACTCTGCCACTGATTATC 26 7449811 0.978629451 10 25 192 1 1.505149978 0.21875 0.153846154 0.3125 26 0 0 32 2R:7449752-7449851 6 CG11125 FBtr0336911 7449165 7449995 GTTCCT 6mer2-7 dme-miR-276a-3p 2R + 7449796 7449848 3'utr CG11125 FlyBase G10308.2 AATCGGATAAGACTTTGCTGTTCCTTTGCGAGCATGATACTCTGCCACTGATT 14 7449811 0.814440217 8 13 102 0.9375 1.176091259 0.1875 0.142857143 0.25 14 1 0 15 2R:7449796-7449848 6 13.5 2039 FBgn0033174 169.62 12.60333333 19.33 0.079589671 1.0711452 0.698396275 4 4 4 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 2R 7460305 7460310 - 2R_7460305_7460310_- 1 1 1 0 CG11141 FBtr0345799 7459683 7460659 2R - 7460269 7460327 3'utr CG11141 FlyBase G20409.1 AAGTGCAAACATTTCGTCCAAAGGGTGCCCCCCAGCAGGAAATGGATACGGACTGATAC 44 7460316 0.956144497 2 43 202 0.979591837 1.380211242 0.142857143 0.113636364 0.204081633 44 0 1 48 2R:7460269-7460327 6 CG11141 FBtr0345799 7459683 7460659 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 7460269 7460327 3'utr CG11141 FlyBase G15483.1 AAGTGCAAACATTTCGTCCAAAGGGTGCCCCCCAGCAGGAAATGGATACGGACTGATAC 25 7460316 0.958011438 3 24 115 0.972972973 1.255272505 0.135135135 0.32 0.540540541 25 0 1 36 2R:7460269-7460327 6 33.5 2040 FBgn0033177 665.0033333 30.53 46.47333333 0.050375687 1.097281363 0.720843494 6 6 6 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2R 7460549 7460554 - 2R_7460549_7460554_- 0.999994814 0.999534582 0.999764698 0.000325411 CG11141 FBtr0088999|FBtr0088999|FBtr0088999|FBtr0345799|FBtr0345799|FBtr0345799|FBtr0088998|FBtr0088998|FBtr0088998 7460429|7460429|7460429|7459683|7459683|7459683|7460429|7460429|7460429 7460659|7460659|7460659|7460659|7460659|7460659|7460659|7460659|7460659 2R - 7460514 7460603 3'utr CG11141 FlyBase G20411.2 ATTCTCTTTCTATGTTTCTATGTTTGCAAAAGTGTTGTGTTTATCAGATTGTGATCACCGTGATTTAGTTACTCTTTTTAGTGGAATTTA 664 7460539 0.949720983 25 649 5628 0.978391357 1.869764924 0.543817527 0.219879518 0.378151261 664 8 10 815 2R:7460514-7460603 6 CG11141 FBtr0088998|FBtr0088998|FBtr0088998|FBtr0345799|FBtr0345799|FBtr0345799|FBtr0088999|FBtr0088999|FBtr0088999 7460429|7460429|7460429|7459683|7459683|7459683|7460429|7460429|7460429 7460659|7460659|7460659|7460659|7460659|7460659|7460659|7460659|7460659 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 7460516 7460717 stop_codon CG11141 FlyBase G15485.1 AACGCCAGCCACCAGTGACTCAAACACCTCCAGCGAGTGGGAGTTTTTGGACAACTAGTTCAGTATTAGAATTAAGTGCATACTCATTCGATTCCATTTGCATTTTTGCACTTTATTCTCTTTCTATGTTTCTATGTTTGCAAAAGTGTTGTGTTTATCAGATTGTGATCACCGTGATTTAGTTACTCTTTTTAGTGGAATT 712 7460539 0.98422822 37 693 5788 0.977653631 2.544068044 0.474860335 0.373595506 0.584729981 712 22 2 1050 2R:7460516-7460717 6 539.5 2041 FBgn0033177 665.0033333 30.53 46.47333333 0.811274129 17.67114314 11.60880792 -15 -15 -15 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 2R 7466920 7466925 - 2R_7466920_7466925_- 1 1 1 0 Aldh-III FBtr0310674|FBtr0310676|FBtr0088996|FBtr0310675|FBtr0300481|FBtr0300479|FBtr0300477|FBtr0300480|FBtr0088993|FBtr0300478|FBtr0336912|FBtr0308198 7466877|7466877|7466877|7466877|7466877|7466877|7466877|7466877|7466877|7466877|7466877|7466877 7467032|7467295|7467032|7467032|7467295|7467295|7467295|7467295|7467295|7467295|7467295|7467295 2R - 7466901 7466939 3'utr Aldh-III FlyBase G20434.1 GCTATTTAATACAAATGTGAATGCTGTAATGTAATGTAC 13 7466916 0.729045475 4 13 84 1 1.176091259 0.066666667 0.153846154 0.266666667 13 0 0 15 2R:7466901-7466939 6 Aldh-III FBtr0308198|FBtr0336912|FBtr0088993|FBtr0300477|FBtr0300479|FBtr0300481|FBtr0300478|FBtr0310675|FBtr0088996|FBtr0300480|FBtr0310676|FBtr0310674 7466877|7466877|7466877|7466877|7466877|7466877|7466877|7466877|7466877|7466877|7466877|7466877 7467295|7467295|7467295|7467295|7467295|7467295|7467295|7467032|7467032|7467295|7467295|7467032 ATGTGA 6mer3-8 dme-miR-1003-3p 2R - 7466903 7466936 3'utr Aldh-III FlyBase G15503.1 ATTTAATACAAATGTGAATGCTGTAATGTAATGT 20 7466916 0.7488042 4 20 134 1 1.579783597 0.026315789 0.5 0.736842105 20 0 0 38 2R:7466903-7466936 6 16.5 2042 FBgn0010548 1095.666667 59.85333333 91.78333333 0.015059325 0.275673869 0.1797712 -9 -9 -9 0.01 dme-miR-13b-2-5p 7mer-A1 TTGACGA 2R 7478960 7478966 - 2R_7478960_7478966_- 0.782911824 0.782911824 0.782911824 0 wech FBtr0300082 7478851 7483393 2R - 7478955 7478985 3'utr wech FlyBase G20448.1 AGCGTACATAGGTGTGGACTTGACGAGACAA 6 7478969 0.853788871 4 5 27 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2R:7478955-7478985 7 wech FBtr0300082 7478851 7483393 TTGACGA 7mer-A1 dme-miR-13b-2-5p 2R - 7478951 7479020 3'utr wech FlyBase G15509.1 TTATATACCCGAATATATATATATATATATATACAAGCGTACATAGGTGTGGACTTGACGAGACAAGAGT 9 7478971 0.971651016 5 9 57 1 1.079181246 0.083333333 0.222222222 0.416666667 9 0 0 12 2R:7478951-7479020 7 5.5 2043 FBgn0259745 2441.89 39.74 61.13333333 0.002252354 0.138399597 0.089967285 3 5 4 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 7479181 7479186 - 2R_7479181_7479186_- 1 1 1 0 wech FBtr0300082 7478851 7483393 2R - 7479107 7479215 3'utr wech FlyBase G20449.1 AAGGCGATAAATCGAAGTCTAGGAAATCTACCAAATCAAGCGACGGATTCAATAACGAGTTGCAGTTTAAAATTGTAATTGTGTAGTAGTGGAAAGCGAGGAGGAGGTC 28 7479187 0.939193217 6 26 106 0.911764706 1.491361694 0.088235294 0.178571429 0.323529412 28 3 0 31 2R:7479107-7479215 6 wech FBtr0300082 7478851 7483393 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 7479147 7479201 3'utr wech FlyBase G15510.1 AAGTCTAGGAAATCTACCAAATCAAGCGACGGATTCAATAACGAGTTGCAGTTTA 21 7479187 0.928356051 4 18 67 0.9375 1.477121255 0.03125 0.476190476 0.65625 21 2 0 30 2R:7479147-7479201 6 20.5 2044 FBgn0259745 2441.89 39.74 61.13333333 0.008395137 0.515853045 0.335332606 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 7479460 7479465 - 2R_7479460_7479465_- 1 0.590353716 0.795176858 0.289663677 wech FBtr0300082 7478851 7483393 2R - 7479433 7479503 3'utr wech FlyBase G20451.2 ATATATATCTAGGGCAAATGATTACCAAATTACAAATTACCAAAATCCCTCCTAGCCCGCTAATCTAAATC 37 7479451 0.868507629 9 32 182 0.880952381 0.86923172 0 0.081081081 0.19047619 37 1 4 37 2R:7479433-7479503 6 wech FBtr0300082 7478851 7483393 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 7479436 7479500 3'utr wech FlyBase G15511.2 TATATCTAGGGCAAATGATTACCAAATTACAAATTACCAAAATCCCTCCTAGCCCGCTAATCTAA 27 7479451 0.750409282 8 26 126 0.953488372 1.135662602 0 0.481481481 0.674418605 27 0 2 41 2R:7479436-7479500 6 21 2045 FBgn0259745 2441.89 39.74 61.13333333 0.008599896 0.528434826 0.34351145 -14 -14 -14 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2R 7479545 7479551 - 2R_7479545_7479551_- 0.808818836 0.808818836 0.808818836 0 wech FBtr0300082|FBtr0300082 7478851|7478851 7483393|7483393 2R - 7479518 7479560 3'utr wech FlyBase G20452.1 ATACATAGTTACTTAACATAGACTAGCCTAGACTAGCCCGCAA 15 7479542 0.790306065 6 13 70 0.904761905 0.977723605 0 0.2 0.428571429 15 1 1 19 2R:7479518-7479560 7 wech FBtr0300082|FBtr0300082 7478851|7478851 7483393|7483393 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2R - 7479520 7479573 3'utr wech FlyBase G15512.1 AGTACATACATACATACATAGTTACTTAACATAGACTAGCCTAGACTAGCCCGC 10 7479542 0.805630545 5 8 53 0.866666667 0.636822098 0 0.3 0.533333333 10 0 2 13 2R:7479520-7479573 7 9.5 2046 FBgn0259745 2441.89 39.74 61.13333333 0.003890429 0.23905385 0.155398037 -9 -9 -9 0.01 dme-miR-986-5p 7mer-m8 ATTCGAG 2R 7479633 7479639 - 2R_7479633_7479639_- 0.671787575 0.671796683 0.671792129 6.43E-06 wech FBtr0300082 7478851 7483393 2R - 7479597 7479650 3'utr wech FlyBase G20453.1 TTCATATTCATATTCGAGCGGAGGACTGGACTCAGCGAAATAGCCAGCATACTA 291 7479624 0.970730441 3 290 416 0.997260274 2.561101384 0.578082192 0.202749141 0.364383562 291 1 0 364 2R:7479597-7479650 7 wech FBtr0300082 7478851 7483393 ATTCGAG 7mer-m8 dme-miR-986-5p 2R - 7479601 7479654 3'utr wech FlyBase G15513.1 CATATTCATATTCATATTCGAGCGGAGGACTGGACTCAGCGAAATAGCCAGCAT 180 7479624 0.962394358 4 180 270 1 2.432969291 0.627306273 0.355555556 0.57195572 180 0 0 271 2R:7479601-7479654 7 218.5 2047 FBgn0259745 2441.89 39.74 61.13333333 0.08947987 5.498238551 3.574154853 -15 -15 -15 0.01 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 7479805 7479812 - 2R_7479805_7479812_- 0.605654138 0.605654138 0.605654138 0 wech FBtr0300082 7478851 7483393 2R - 7479677 7479854 3'utr wech FlyBase G20454.1 AAATACACGTACATAACATATGTAATAATTATGGAGCAATTGAGTACAAAACGAGTACAAATTTAAATTATAAGCCAGATCGGAGGACACACACGGACACACACCGCTTAAGTTAAACCATACACGGAGCAGTTGAAATATTGATAGGCCAGCTACTGGTTTCGCATAGCAAGTACAG 87 7479815 0.946764696 16 76 320 0.821428571 1.185636577 0.151785714 0.206896552 0.383928571 87 15 5 92 2R:7479677-7479854 8 wech FBtr0300082 7478851 7483393 AGTACAAA 8mer-A1 dme-miR-305-5p 2R - 7479668 7479830 3'utr wech FlyBase G15514.1 ATAATTATGGAGCAATTGAGTACAAAACGAGTACAAATTTAAATTATAAGCCAGATCGGAGGACACACACGGACACACACCGCTTAAGTTAAACCATACACGGAGCAGTTGAAATATTGATAGGCCAGCTACTGGTTTCGCATAGCAAGTACAGCATGTACTC 62 7479815 0.955929955 14 54 250 0.87755102 1.457377197 0.306122449 0.403225806 0.62244898 62 10 2 86 2R:7479668-7479830 8 56.5 2048 FBgn0259745 2441.89 39.74 61.13333333 0.023137815 1.421741319 0.924209378 3 3 3 0.01 dme-miR-970-3p 6mer3-8 TCTTAT 2R 7480160 7480165 - 2R_7480160_7480165_- 1 1 1 0 wech FBtr0300083|FBtr0300082 7480093|7478851 7483393|7483393 2R - 7480141 7480200 5'utr wech FlyBase G20456.1 AATCGATCGACGATGCTAAAGCAAACGGAATGAACTCTTATCAAAATACAATTTTGAGTA 63 7480163 0.775571462 6 62 314 0.985714286 1.838849091 0.057142857 0.111111111 0.2 63 1 0 69 2R:7480141-7480200 6 wech FBtr0300082|FBtr0300083 7478851|7480093 7483393|7483393 TCTTAT 6mer3-8 dme-miR-970-3p 2R - 7480139 7480196 5'utr wech FlyBase G15516.1 GATCGACGATGCTAAAGCAAACGGAATGAACTCTTATCAAAATACAATTTTGAGTAAT 43 7480164 0.951826613 5 41 195 0.963636364 1.72427587 0.2 0.23255814 0.4 43 2 0 53 2R:7480139-7480196 6 50 2049 FBgn0259745 2441.89 39.74 61.13333333 0.020475943 1.258178158 0.817884406 -2 -1 -1.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 2R 7480674 7480679 - 2R_7480674_7480679_- 1 0.999999999 1 0 wech FBtr0300083|FBtr0300082 7480093|7478851 7483393|7483393 2R - 7480671 7480727 5'utr wech FlyBase G20459.1 GTTAGACACAACCAATTACTACAAGTCATGAGGATACTGAACAATTTGCCAAAGGCT 7 7480682 0.946327776 5 7 32 1 1.041392685 0.363636364 0.285714286 0.545454545 7 0 0 11 2R:7480671-7480727 6 wech FBtr0300082|FBtr0300083 7478851|7480093 7483393|7483393 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 7480658 7480692 5'utr wech FlyBase G15518.1 ACTGAACAATTTGCCAAAGGCTAAGAATCAAAAGG 8 7480681 0.932466938 2 7 29 1 1.079181246 0.083333333 0.375 0.583333333 8 0 0 12 2R:7480658-7480692 6 5 2050 FBgn0259745 2441.89 39.74 61.13333333 0.002047594 0.125817816 0.081788441 3 2 2.5 0.01 dme-miR-317-3p 8mer-A1 TGTGTTCA 2R 7481615 7481622 - 2R_7481615_7481622_- 0.631136783 0.631136782 0.631136782 0 wech FBtr0300083|FBtr0300082 7480093|7478851 7483393|7483393 2R - 7481576 7481640 5'utr wech FlyBase G20464.2 CGTTCTATTCTTTGTCCTTGTGTTCAAACCCGACTTCAACGGATCGACGGAGATGATGATACATA 48 7481623 0.895786489 5 45 423 0.948275862 1.439332694 0.103448276 0.104166667 0.25862069 48 2 1 55 2R:7481576-7481640 8 wech FBtr0300082|FBtr0300083 7478851|7480093 7483393|7483393 TGTGTTCA 8mer-A1 dme-miR-317-3p 2R - 7481602 7481634 5'utr wech FlyBase G15522.2 ATTCTTTGTCCTTGTGTTCAAACCCGACTTCAA 26 7481623 0.713993729 3 25 210 0.971428571 1.531478917 0.028571429 0.192307692 0.4 26 1 0 34 2R:7481602-7481634 8 33.5 2051 FBgn0259745 2441.89 39.74 61.13333333 0.013718882 0.842979366 0.547982552 1 1 1 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT 2R 7481907 7481912 - 2R_7481907_7481912_- 1 0.999999999 1 0 wech FBtr0300084|FBtr0300083|FBtr0300080|FBtr0300082 7481874|7480093|7481874|7478851 7483393|7483393|7483393|7483393 2R - 7481891 7481934 3'utr wech FlyBase G20466.1 TGAATACACATTTAGGTGACATGTTCCTCGCAAAAGAAACAAAT 14 7481913 0.974524855 6 14 84 1 1.230448921 0.058823529 0.214285714 0.352941176 14 0 0 17 2R:7481891-7481934 6 wech FBtr0300082|FBtr0300084|FBtr0300083|FBtr0300080 7478851|7481874|7480093|7481874 7483393|7483393|7483393|7483393 GTTCCT 6mer2-7 dme-miR-276a-3p 2R - 7481895 7481944 3'utr wech FlyBase G15525.1 AAGGGCGTATTGAATACACATTTAGGTGACATGTTCCTCGCAAAAGAAAC 15 7481911 0.971674006 6 12 71 0.869565217 0.823908741 0.260869565 0.4 0.608695652 15 1 2 20 2R:7481895-7481944 6 12.5 2052 FBgn0259745 2441.89 39.74 61.13333333 0.005118986 0.31454454 0.204471101 1 -1 0 0.01 dme-miR-317-3p 8mer-A1 TGTGTTCA 2R 7482009 7482016 - 2R_7482009_7482016_- 0.631100735 0.631136782 0.631118758 2.55E-05 wech FBtr0300084|FBtr0300083|FBtr0300080|FBtr0300082 7481874|7480093|7481874|7478851 7483393|7483393|7483393|7483393 2R - 7481959 7482030 3'utr wech FlyBase G20467.1 AATTTTTGACTCAATGTGTTCATTAGCATTTAGTAGACTTAGCGGGCGTGGCATAGTGAAAACGTATGGAAA 318 7482016 0.988577787 19 264 3017 0.84 2.021189299 0.234666667 0.163522013 0.290666667 318 58 2 315 2R:7481959-7482030 8 wech FBtr0300082|FBtr0300084|FBtr0300083|FBtr0300080 7478851|7481874|7480093|7481874 7483393|7483393|7483393|7483393 TGTGTTCA 8mer-A1 dme-miR-317-3p 2R - 7481970 7482030 3'utr wech FlyBase G15526.1 AATTTTTGACTCAATGTGTTCATTAGCATTTAGTAGACTTAGCGGGCGTGGCATAGTGAAA 229 7482016 0.751177039 15 180 2176 0.775216138 2.42975228 0.293948127 0.366812227 0.582132565 229 78 0 269 2R:7481970-7482030 8 249.5 2053 FBgn0259745 2441.89 39.74 61.13333333 0.102174955 6.278309009 4.081243184 0 0 0 0.01 dme-miR-14-3p 8mer-A1 AAGACTGA 2R 7482500 7482507 - 2R_7482500_7482507_- 0.643565469 0.643565469 0.643565469 0 wech FBtr0300084|FBtr0300083|FBtr0300080|FBtr0300082 7481874|7480093|7481874|7478851 7483393|7483393|7483393|7483393 2R - 7482445 7482554 3'utr wech FlyBase G20470.1 AAGAAAATATTGATGGAACCCGCTGACTTTTCGTTGAACTTTATACAAAGACTGATTAACTAAACCGCAATTTCGGAGCCAACTAAAGAACCATATATGGTGAGGCCAAA 241 7482499 0.829855746 19 219 1605 0.902356902 1.826074803 0.215488215 0.174273859 0.32996633 241 26 3 268 2R:7482445-7482554 8 wech FBtr0300082|FBtr0300084|FBtr0300083|FBtr0300080 7478851|7481874|7480093|7481874 7483393|7483393|7483393|7483393 AAGACTGA 8mer-A1 dme-miR-14-3p 2R - 7482280 7482554 3'utr wech FlyBase G15529.1 AAGAAAATATTGATGGAACCCGCTGACTTTTCGTTGAACTTTATACAAAGACTGATTAACTAAACCGCAATTTCGGAGCCAACTAAAGAACCATATATGGTGAGGCCAAAATAAGTGAAAGAGCAACACACTCAAATTGCAATGACATTGATAACGTAAAGTAACTTAACATAGCTTAACATACATACTTTCGCGCATATAGAGCGATACAGATATCATATAGATCCGATCATCCAGTCACGAATCATCATGGGCATAGCTGAAACCGAGTTTAA 229 7482499 0.978696172 34 217 1466 0.946629213 2.226599905 0.306179775 0.366812227 0.592696629 229 18 1 337 2R:7482280-7482554 8 165.5 2054 FBgn0259745 2441.89 39.74 61.13333333 0.067775371 4.164569703 2.707197383 -8 -8 -8 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 2R 7482624 7482630 - 2R_7482624_7482630_- 0.823349562 0.823349562 0.823349562 0 wech FBtr0300084|FBtr0300083|FBtr0300080|FBtr0300082 7481874|7480093|7481874|7478851 7483393|7483393|7483393|7483393 2R - 7482588 7482672 3'utr wech FlyBase G20471.1 TTTGGGACATACATATGTATTTTAATGATTTCCTTATAATTGAGACTGAGCATTTGACAACACGAACTTTGCGTGTACGGAAGCA 374 7482632 0.814231969 12 366 2667 0.980477223 2.354108439 0.106290672 0.200534759 0.351409978 374 8 1 452 2R:7482588-7482672 7 wech FBtr0300082|FBtr0300084|FBtr0300083|FBtr0300080 7478851|7481874|7480093|7481874 7483393|7483393|7483393|7483393 AGACTGA 7mer-A1 dme-miR-14-3p 2R - 7482582 7482652 3'utr wech FlyBase G15530.1 TTTAATGATTTCCTTATAATTGAGACTGAGCATTTGACAACACGAACTTTGCGTGTACGGAAGCAAAGCGA 270 7482632 0.977139938 16 257 1794 0.956632653 2.273001272 0.091836735 0.344444444 0.548469388 270 16 1 375 2R:7482582-7482652 7 308 2055 FBgn0259745 2441.89 39.74 61.13333333 0.126131808 7.750377453 5.038167939 2 2 2 0.01 dme-miR-986-5p 6mer3-8 ATTCGA 2R 7482790 7482795 - 2R_7482790_7482795_- 1 1 1 0 wech FBtr0300084|FBtr0300083|FBtr0300080|FBtr0300082 7481874|7480093|7481874|7478851 7483393|7483393|7483393|7483393 2R - 7482794 7482827 3'utr wech FlyBase G20472.2 TACGGGTTTGCTTAGCGGAATGAGGAAACTACAT 7 7482816 0.81866839 5 6 29 0.875 0.84509804 0.125 0.142857143 0.25 7 1 0 7 2R:7482794-7482827 1 wech FBtr0300082|FBtr0300084|FBtr0300083|FBtr0300080 7478851|7481874|7480093|7481874 7483393|7483393|7483393|7483393 ATTCGA 6mer3-8 dme-miR-986-5p 2R - 7482775 7482826 3'utr wech FlyBase G15532.1 ACGGGTTTGCTTAGCGGAATGAGGAAACTACATTCGACAAGAGTTACTAAAC 13 7482794 0.644513034 8 13 61 1 1.255272505 0.388888889 0.307692308 0.5 13 0 0 18 2R:7482775-7482826 6 5.5 2056 FBgn0259745 2441.89 39.74 61.13333333 0.002252354 0.138399597 0.089967285 21 -1 10 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 2R 7482892 7482898 - 2R_7482892_7482898_- 0.823349562 0.823349562 0.823349562 0 wech FBtr0300084|FBtr0300083|FBtr0300080|FBtr0300082 7481874|7480093|7481874|7478851 7483393|7483393|7483393|7483393 2R - 7482830 7483090 3'utr wech FlyBase G20473.1 AACTAGAACTATAACTAAAACAAAAACAAAAAACAAAAACTAAAGCGAAAGGCAGGCGGTTGAGTAGGATTTAGGAGATATATATAAACGTAGGGTCCGTGAGCATTCAGTAGAGTTACCGAACCTAGTAAAAGATAATGCAAAGAGGGAACTCAACCATTTACTAGATGAAAATATTATTACCTGTTAGTTAGACTGAAAGGCAGTTTGCTAGCTGATAGAAGGAGGTACGAACCAGGTCAGGTGGCGATTGTGTTTTTT 261 7482900 0.977157368 33 247 1617 0.952830189 1.782472624 0.116352201 0.195402299 0.339622642 261 11 4 303 2R:7482830-7483090 7 wech FBtr0300082|FBtr0300084|FBtr0300083|FBtr0300080 7478851|7481874|7480093|7481874 7483393|7483393|7483393|7483393 AGACTGA 7mer-A1 dme-miR-14-3p 2R - 7482857 7482922 3'utr wech FlyBase G15533.1 TGAAAATATTATTACCTGTTAGTTAGACTGAAAGGCAGTTTGCTAGCTGATAGAAGGAGGTACGAA 129 7482900 0.70257958 13 124 775 0.959390863 1.975431809 0.091370558 0.372093023 0.588832487 129 7 1 189 2R:7482857-7482922 7 147.5 2057 FBgn0259745 2441.89 39.74 61.13333333 0.060404031 3.711625566 2.412758997 2 2 2 0.01 dme-miR-283-5p 6mer2-7 GATATT 2R 7483211 7483216 - 2R_7483211_7483216_- 1 1 1 0 wech FBtr0300081|FBtr0300084|FBtr0300083|FBtr0300080|FBtr0300082 7483154|7481874|7480093|7481874|7478851 7483393|7483393|7483393|7483393|7483393 2R - 7483169 7483352 3'utr wech FlyBase G20474.1 AAGAGCGAAACCTTAGCGTAGAGTTTCAAATAACATGACGATTATGAGGAGGTGCCGAAACCGATTTAATAAGAAAAAATCTGAAATCATGAAAGTTAGCGAAAATTTTTAGCTTAAGTGCTACAACGATTACCTCGATATTGCTTAAGAGTTATGGTTACGATTTGGTAATTTACAATACAAT 286 7483223 0.983408018 27 267 2054 0.932748538 1.503790683 0.134502924 0.157342657 0.295321637 286 14 9 319 2R:7483169-7483352 6 wech FBtr0300082|FBtr0300081|FBtr0300084|FBtr0300083|FBtr0300080 7478851|7483154|7481874|7480093|7481874 7483393|7483393|7483393|7483393|7483393 GATATT 6mer2-7 dme-miR-283-5p 2R - 7483200 7483317 3'utr wech FlyBase G15534.2 TGACGATTATGAGGAGGTGCCGAAACCGATTTAATAAGAAAAAATCTGAAATCATGAAAGTTAGCGAAAATTTTTAGCTTAAGTGCTACAACGATTACCTCGATATTGCTTAAGAGTT 189 7483223 0.831774575 21 173 1221 0.924092409 1.405765346 0.194719472 0.428571429 0.643564356 189 13 10 280 2R:7483200-7483317 6 180 2058 FBgn0259745 2441.89 39.74 61.13333333 0.073713394 4.529441369 2.94438386 7 7 7 0.01 dme-miR-8-3p 7mer-m8 CAGTATT 2R 7490928 7490934 - 2R_7490928_7490934_- 0.661615243 0.661615243 0.661615243 0 Coop FBtr0329876|FBtr0088984 7490834|7490834 7491048|7491048 2R - 7490844 7491014 3'utr Coop FlyBase G20494.1 ACTTTATAAGCCTAGCTTACAGTATTATAAGAACGCGACTGACTAACTCTGTGAATCTGCCTACATACGTAGCATGTAATCAGTATTCCGGCCTGCTTTCCTTCATACCAACACACTTCAATACATACCATATTGCATTACAATACATATTTACACTTCAAATAGACGATC 1332 7490929 0.986804976 28 1307 11306 0.982524272 2.227029262 0.150161812 0.13963964 0.258252427 1332 19 8 1518 2R:7490844-7491014 7 Coop FBtr0329876|FBtr0088984 7490834|7490834 7491048|7491048 CAGTATT 7mer-m8 dme-miR-8-3p 2R - 7490899 7491015 3'utr Coop FlyBase G15552.1 TACTTTATAAGCCTAGCTTACAGTATTATAAGAACGCGACTGACTAACTCTGTGAATCTGCCTACATACGTAGCATGTAATCAGTATTCCGGCCTGCTTTCCTTCATACCAACACAC 1000 7490929 0.820737119 23 966 8069 0.973614776 2.390935107 0.132585752 0.363 0.579815303 1000 35 5 1476 2R:7490899-7491015 7 911 2059 FBgn0263240 183.6266667 15.05666667 22.94666667 4.961153064 60.5047598 39.70075537 -5 -5 -5 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 2R 7494115 7494120 - 2R_7494115_7494120_- 1 1 1 0 CG1620 FBtr0300830|FBtr0088983|FBtr0336918 7494010|7493804|7494010 7494823|7494368|7494368 2R - 7494076 7494212 3'utr CG1620 FlyBase G20508.1 AAACATATATATTCCAGATTCTTAAATCGACATCTCTCATAACCCGTAAAGAATTTCTCTATTGTTAAGTGTGCGATTCGTCTATTTGTTACATGTGCGTGTGGATTCCGGAACCAAGTACTTATCGCTTATATATA 104 7494107 0.816846336 19 101 604 0.976377953 2.093421685 0.299212598 0.182692308 0.330708661 104 3 0 124 2R:7494076-7494212 6 CG1620 FBtr0336918|FBtr0300830|FBtr0088983 7494010|7494010|7493804 7494368|7494823|7494368 ATGTGC 6mer3-8 dme-miR-305-3p 2R - 7494074 7494251 3'utr CG1620 FlyBase G15559.2 AAATATGCATACTGTACGTGTAGTATATACCATATGTCTAAACATATATATTCCAGATTCTTAAATCGACATCTCTCATAACCCGTAAAGAATTTCTCTATTGTTAAGTGTGCGATTCGTCTATTTGTTACATGTGCGTGTGGATTCCGGAACCAAGTACTTATCGCTTATATATACA 85 7494107 0.973695573 24 79 546 0.949275362 1.515211304 0.333333333 0.352941176 0.601449275 85 4 3 131 2R:7494074-7494251 6 34.5 2060 FBgn0033183 539.2866667 29.41333333 45.03 0.063973397 1.172937443 0.766155896 -13 -13 -13 0.01 dme-miR-995-5p 6mer2-7 ATTCGG 2R 7494305 7494310 - 2R_7494305_7494310_- 1 1 1 0 CG1620 FBtr0300830|FBtr0088983|FBtr0336918 7494010|7493804|7494010 7494823|7494368|7494368 2R - 7494258 7494324 3'utr CG1620 FlyBase G20509.2 CGCAGGCGCTTTCGATTCGGTTGGGCCAGGCGATGTATTTGCAGGGCGCTTCATTACCATTACCACT 12 7494313 0.974366823 8 11 63 0.866666667 1.113943352 0.133333333 0.25 0.4 12 2 0 13 2R:7494258-7494324 6 CG1620 FBtr0336918|FBtr0300830|FBtr0088983 7494010|7494010|7493804 7494368|7494823|7494368 ATTCGG 6mer2-7 dme-miR-995-5p 2R - 7494276 7494313 3'utr CG1620 FlyBase G15560.1 TCGATTCGGTTGGGCCAGGCGATGTATTTGCAGGGCGC 7 7494285 0.858498218 4 7 30 1 0.903089987 0.375 0.142857143 0.25 7 0 0 8 2R:7494276-7494313 6 5.5 2061 FBgn0033183 539.2866667 29.41333333 45.03 0.010198657 0.186990027 0.122140795 3 -25 -11 0.01 dme-miR-1007-3p 6mer2-7 GAGCTT 2R 7494721 7494726 - 2R_7494721_7494726_- 0.861856704 0.841158715 0.851507709 0.014635696 CG1620 FBtr0300830 7494010 7494823 2R - 7494700 7494752 3'utr CG1620 FlyBase G20512.1 TGGAAGAAGAGTGAGCGCCGGGATCAGAGCTTTGCTTTAAACGACACCATCGA 8 7494721 0.960619817 4 8 41 1 0.903089987 0.375 0 0 8 0 0 8 2R:7494700-7494752 6 CG1620 FBtr0300830 7494010 7494823 GAGCTT 6mer2-7 dme-miR-1007-3p 2R - 7494702 7494747 3'utr CG1620 FlyBase G15563.1 GAAGAGTGAGCGCCGGGATCAGAGCTTTGCTTTAAACGACACCATC 14 7494721 0.700856862 5 14 78 1 1.361727836 0.347826087 0.5 0.695652174 14 0 0 23 2R:7494702-7494747 6 10.5 2062 FBgn0033183 539.2866667 29.41333333 45.03 0.019470164 0.356980961 0.233177881 -5 -5 -5 0.01 dme-bantam-3p 6mer3-8 TGATCT 2R 7507528 7507533 + 2R_7507528_7507533_+ 0.99955146 0.986909245 0.993230352 0.008939456 didum FBtr0089744 7505871 7508237 2R + 7507510 7507563 3'utr didum FlyBase G13547.1 GGATGTTCAGACCATTTGTGATCTGTGTACTTCTCTGAGCACGGCGCAGGTCCT 16 7507525 0.987291717 5 16 144 1 1.204119983 0.25 0 0 16 0 0 16 2R:7507510-7507563 6 didum FBtr0089744 7505871 7508237 TGATCT 6mer3-8 dme-bantam-3p 2R + 7507513 7507562 3'utr didum FlyBase G10321.1 TGTTCAGACCATTTGTGATCTGTGTACTTCTCTGAGCACGGCGCAGGTCC 7 7507533 0.981461847 3 5 42 0.888888889 0.903089987 0.111111111 0.142857143 0.333333333 7 1 0 8 2R:7507513-7507562 6 10 2063 FBgn0261397 963.6266667 18.58333333 28.54333333 0.010377463 0.538116592 0.350344505 3 -5 -1 0.01 dme-miR-34-5p 6mer3-8 CACTGC 2R 7507914 7507919 + 2R_7507914_7507919_+ 1 1 1 0 didum FBtr0089743|FBtr0089745|FBtr0089744 7507857|7507857|7505871 7508237|7508625|7508237 2R + 7507856 7507927 stop_codon didum FlyBase G13548.1 TAAACGTCGCGTGCCTGCGTCTTGCCGGTCGAGAACTTTGCCATTTTGGATGACATTACACTGCTTAGTTTT 13 7507912 0.932591288 7 12 92 0.933333333 1.146128036 0.133333333 0.153846154 0.266666667 13 1 0 14 2R:7507856-7507927 6 didum FBtr0089744|FBtr0089745|FBtr0089743 7505871|7507857|7507857 7508237|7508625|7508237 CACTGC 6mer3-8 dme-miR-34-5p 2R + 7507865 7507927 3'utr didum FlyBase G10322.1 CGTGCCTGCGTCTTGCCGGTCGAGAACTTTGCCATTTTGGATGACATTACACTGCTTAGTTTT 6 7507912 0.990134796 5 5 45 1 1.113943352 0.153846154 0.666666667 0.846153846 6 0 0 13 2R:7507865-7507927 6 5 2064 FBgn0261397 963.6266667 18.58333333 28.54333333 0.005188731 0.269058296 0.175172253 2 2 2 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 2R 7508048 7508053 + 2R_7508048_7508053_+ 0.999999396 1 0.999999698 4.24E-07 didum FBtr0089743|FBtr0089745|FBtr0089744 7507857|7507857|7505871 7508237|7508625|7508237 2R + 7508010 7508066 3'utr didum FlyBase G13549.1 TAGAGCCGTTTTGCCGAAATGTTTGTGTAGTTCCTGTTTAGCTTAAATACCCGTTGT 16 7508047 0.991882828 8 14 156 0.944444444 1.230448921 0.111111111 0.0625 0.166666667 16 1 0 17 2R:7508010-7508066 6 didum FBtr0089744|FBtr0089745|FBtr0089743 7505871|7507857|7507857 7508237|7508625|7508237 TAGCTT 6mer3-8 dme-miR-79-3p 2R + 7508026 7508066 3'utr didum FlyBase G10323.1 AAATGTTTGTGTAGTTCCTGTTTAGCTTAAATACCCGTTGT 16 7508047 0.728151613 6 16 178 1 1.491361694 0.032258065 0.6875 0.838709677 16 0 0 31 2R:7508026-7508066 6 15 2065 FBgn0261397 963.6266667 18.58333333 28.54333333 0.015566194 0.807174888 0.525516758 1 1 1 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2R 7508360 7508365 + 2R_7508360_7508365_+ 1 1 1 0 didum FBtr0089745 7507857 7508625 2R + 7508335 7508391 3'utr didum FlyBase G13551.1 GTGTAAAGCCTACAGATGATAGAGTAAGACTCATAGAGCTCACCGATGATGCATTGC 9 7508359 0.973592774 6 8 45 0.909090909 1 0.181818182 0.222222222 0.363636364 9 1 0 10 2R:7508335-7508391 6 didum FBtr0089745 7507857 7508625 AAGACT 6mer3-8 dme-miR-14-3p 2R + 7508334 7508394 3'utr didum FlyBase G10325.1 CGTGTAAAGCCTACAGATGATAGAGTAAGACTCATAGAGCTCACCGATGATGCATTGCTGT 7 7508368 0.982181723 3 5 33 0.875 1.146128036 0.125 0.857142857 0.9375 7 2 0 14 2R:7508334-7508394 6 5.5 2066 FBgn0261397 963.6266667 18.58333333 28.54333333 0.005707605 0.295964126 0.192689478 1 -8 -3.5 0.01 dme-miR-190-5p 6mer3-8 ACATAT 2R 7513996 7514001 - 2R_7513996_7514001_- 1 1 1 0 CG1603 FBtr0336925 7513844 7514326 2R - 7513961 7514032 3'utr CG1603 FlyBase G20551.1 AACCGTTACTTGTAGAGGAGATATTAGAATAACATATGATTTTTTGGTTCTGGCTCTAGATCTAGAGCTGGC 24 7513988 0.826533364 6 21 280 0.851851852 1.361727836 0.481481481 0.125 0.222222222 24 4 0 23 2R:7513961-7514032 6 CG1603 FBtr0336925 7513844 7514326 ACATAT 6mer3-8 dme-miR-190-5p 2R - 7513964 7513997 3'utr CG1603 FlyBase G15594.1 ATGATTTTTTGGTTCTGGCTCTAGATCTAGAGCT 8 7513988 0.664643074 4 7 83 0.916666667 1.041392685 0.25 0.375 0.583333333 8 1 0 11 2R:7513964-7513997 2 9 2067 FBgn0033185 302 16.58333333 25.34333333 0.029801325 0.542713568 0.355122978 -13 -13 -13 0.01 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 7522477 7522484 - 2R_7522477_7522484_- 0.595800413 0.605654138 0.600727276 0.006967618 Orc1 FBtr0088959 7522435 7522683 2R - 7522437 7522498 3'utr Orc1 FlyBase G20568.1 TTTAAACAATTTAAAGTACAAACTCGTTACTAAAAATACCAAATAGAACACCAGCACAGTGT 12 7522462 0.946033185 5 12 52 1 1.176091259 0.066666667 0.166666667 0.333333333 12 0 0 15 2R:7522437-7522498 8 Orc1 FBtr0088959 7522435 7522683 AGTACAAA 8mer-A1 dme-miR-305-5p 2R - 7522444 7522501 3'utr Orc1 FlyBase G15605.1 ATGTTTAAACAATTTAAAGTACAAACTCGTTACTAAAAATACCAAATAGAACACCAGC 16 7522488 0.870251502 6 14 88 0.857142857 1.255272505 0.095238095 0.1875 0.380952381 16 3 0 18 2R:7522444-7522501 8 8 2068 FBgn0022772 387.5666667 14.83333333 22.67666667 0.02064161 0.539325843 0.352785536 -22 4 -9 0.01 dme-miR-33-5p 6mer3-8 CAATGC 2R 7535626 7535631 + 2R_7535626_7535631_+ 1 1 1 0 Cyt-b5 FBtr0088905|FBtr0088906 7535615|7535615 7535936|7535936 2R + 7535348 7535661 stop_codon Cyt-b5 FlyBase G13564.1 AGGTGCTCATCGAGCAGGCCGGCAAAGATGCCACGGAGAACTTTGAGGACGTTGGCCACAGCAACGATGCCCGCGACATGATGAAGAAGTACAAAATCGGTGAGCTGGTGGAGAGCGAAAGGACAAGCGTGGCCCAGAAGTCGGAGCCGACCTGGAGCACGGAACAGCAAACCGAGGAGAGTTCTGTGAAGTCGTGGCTGGTGCCCCTCGTCCTGTGCTTGGTGGCCACGCTCTTCTACAAGTTCTTCTTTGGCGGTGCCAAGCAATAGGAGGAGCCACAATGCCCAGCAGAGACTTTCCAGCCCGCTCCGGAG 124 7535645 0.955251701 35 104 477 0.826388889 1.121304452 0.458333333 0.153225806 0.270833333 124 17 8 119 2R:7535348-7535661 6 Cyt-b5 FBtr0088905|FBtr0088906 7535615|7535615 7535936|7535936 CAATGC 6mer3-8 dme-miR-33-5p 2R + 7535612 7535661 stop_codon Cyt-b5 FlyBase G10333.2 AATAGGAGGAGCCACAATGCCCAGCAGAGACTTTCCAGCCCGCTCCGGAG 20 7535644 0.932963253 4 18 54 0.84375 1.431363764 0.375 0.45 0.65625 20 5 0 27 2R:7535612-7535661 6 25.5 2069 FBgn0264294 771.6366667 137.7833333 210.6333333 0.033046641 0.185073183 0.121063459 -19 -18 -18.5 0.01 dme-miR-79-3p 6mer2-7 AGCTTT 2R 7535728 7535733 + 2R_7535728_7535733_+ 1 1 1 0 Cyt-b5 FBtr0088905|FBtr0088906 7535615|7535615 7535936|7535936 2R + 7535668 7535757 3'utr Cyt-b5 FlyBase G13565.1 AGTTAATCAACAAACGGAGAGCCCGAGAGTCACATGAGGAGCGGGACAGTGGAGCGGGAAAGCTTTTTATAGTAAATTTGTGCTAAGTTT 100 7535734 0.992726418 10 97 579 0.973451327 2.041392685 0.123893805 0.1 0.203539823 100 3 0 110 2R:7535668-7535757 6 Cyt-b5 FBtr0088905|FBtr0088906 7535615|7535615 7535936|7535936 AGCTTT 6mer2-7 dme-miR-79-3p 2R + 7535683 7535743 3'utr Cyt-b5 FlyBase G10334.1 GGAGAGCCCGAGAGTCACATGAGGAGCGGGACAGTGGAGCGGGAAAGCTTTTTATAGTAAA 46 7535734 0.963374625 4 46 249 1 1.826074803 0.179104478 0.369565217 0.567164179 46 0 0 67 2R:7535683-7535743 6 63 2070 FBgn0264294 771.6366667 137.7833333 210.6333333 0.081644643 0.457239627 0.299097959 -6 -6 -6 0.01 dme-miR-283-5p 7mer-m8 TGATATT 2R 7535855 7535861 + 2R_7535855_7535861_+ 0.620203677 0.620203677 0.620203677 0 Cyt-b5 FBtr0088905|FBtr0088906 7535615|7535615 7535936|7535936 2R + 7535770 7535905 3'utr Cyt-b5 FlyBase G13566.1 TTGGCATTTGGCGTTTTTGTACAACCCTCTACACGTGTAATTCCTTCAGACGGCGGTTCTAGACTCTAAAAGTAATTTATCCCATTGATATTCCAACATTTGAGGCACGGAACGAAAACGATAAGTTTTTATTCGC 250 7535870 0.86373589 21 243 1201 0.982817869 2.456366033 0.226804124 0.148 0.268041237 250 5 0 286 2R:7535770-7535905 7 Cyt-b5 FBtr0088905|FBtr0088906 7535615|7535615 7535936|7535936 TGATATT 7mer-m8 dme-miR-283-5p 2R + 7535802 7535894 3'utr Cyt-b5 FlyBase G10335.1 ACGTGTAATTCCTTCAGACGGCGGTTCTAGACTCTAAAAGTAATTTATCCCATTGATATTCCAACATTTGAGGCACGGAACGAAAACGATAAG 165 7535870 0.860668488 16 152 724 0.958847737 2.367355921 0.304526749 0.363636364 0.567901235 165 10 0 233 2R:7535802-7535894 7 131.5 2071 FBgn0264294 771.6366667 137.7833333 210.6333333 0.170416992 0.954397 0.624307644 -15 -15 -15 0.01 dme-miR-1006-3p 7mer-A1 GAATTTA 2R 7580482 7580488 + 2R_7580482_7580488_+ 0.823349562 0.823349547 0.823349555 7.07E-08 Vps13 FBtr0088910|FBtr0310024 7580470|7580470 7580675|7580675 2R + 7580433 7580487 stop_codon Vps13 FlyBase G13598.2 CCGTTAAGGGCCACCATCGCCTATCCGGCTCATAATTGACAATAGAACTGAATTT 16 7580470 0.972751173 6 15 87 0.96 1.079181246 0 0.4375 0.64 16 0 1 24 2R:7580433-7580487 6 Vps13 FBtr0310024|FBtr0088910 7580470|7580470 7580675|7580675 GAATTTA 7mer-A1 dme-miR-1006-3p 2R + 7580457 7580496 stop_codon Vps13 FlyBase G10357.2 CCGGCTCATAATTGACAATAGAACTGAATTTATTTCCCAA 24 7580469 0.737826024 7 23 152 0.909090909 1.477121255 0 0.291666667 0.484848485 24 3 0 30 2R:7580457-7580496 7 19 2072 FBgn0033194 1638.743333 18.93 29.02666667 0.01159425 1.003697834 0.65457051 12 13 12.5 0.01 dme-miR-283-5p 8mer-A1 TGATATTA 2R 7580650 7580657 + 2R_7580650_7580657_+ 0.592192292 0.592192292 0.592192292 0 Vps13 FBtr0088910|FBtr0310024 7580470|7580470 7580675|7580675 2R + 7580614 7580664 3'utr Vps13 FlyBase G13600.1 ATGTCGCACTTTTACGTATGTTAACAACCATGGTTTTGATATTAAAATTTT 10 7580648 0.98854002 5 10 95 1 1 0.1 0 0 10 0 0 10 2R:7580614-7580664 8 Vps13 FBtr0310024|FBtr0088910 7580470|7580470 7580675|7580675 TGATATTA 8mer-A1 dme-miR-283-5p 2R + 7580627 7580661 3'utr Vps13 FlyBase G10359.1 ACGTATGTTAACAACCATGGTTTTGATATTAAAAT 8 7580648 0.693611658 5 8 68 1 1.278753601 0 0.75 0.894736842 8 0 0 19 2R:7580627-7580661 8 8 2073 FBgn0033194 1638.743333 18.93 29.02666667 0.00488179 0.422609614 0.275608636 2 2 2 0.01 dme-miR-317-3p 6mer2-7 GTGTTC 2R 7595082 7595087 + 2R_7595082_7595087_+ 1 1 1 0 scra FBtr0088911|FBtr0088912 7594975|7594975 7595242|7595242 2R + 7595056 7595104 3'utr scra FlyBase G13625.1 AAGTTACTCAATTTGCTATTTTAATCGTGTTCGCATTGGTATTAATTTT 19 7595091 0.795254454 5 19 192 1 1.477121255 0 0.315789474 0.566666667 19 0 0 30 2R:7595056-7595104 6 scra FBtr0088911|FBtr0088912 7594975|7594975 7595242|7595242 GTGTTC 6mer2-7 dme-miR-317-3p 2R + 7595056 7595115 3'utr scra FlyBase G10378.1 AAGTTACTCAATTTGCTATTTTAATCGTGTTCGCATTGGTATTAATTTTGTTTTATGTTT 14 7595091 0.990428564 5 14 147 1 1.278753601 0 0.285714286 0.473684211 14 0 0 19 2R:7595056-7595115 6 14 2074 FBgn0261385 2335.333333 86.01 131.1166667 0.005994862 0.162771771 0.106775137 -9 -9 -9 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 2R 7595324 7595329 - 2R_7595324_7595329_- 1 1 1 0 CG1358 FBtr0303287 7595263 7596539 2R - 7595281 7595351 3'utr CG1358 FlyBase G20608.1 GTTCTTGCAAAACGATATACATATGTGAATGTAAATGTGTACTACGTGTATAAAAGTATTCAATAAACTAT 58 7595314 0.857099849 8 57 453 0.973684211 1.86923172 0.368421053 0.275862069 0.447368421 58 2 0 74 2R:7595281-7595351 6 CG1358 FBtr0303287 7595263 7596539 ATGTGA 6mer3-8 dme-miR-1003-3p 2R - 7595291 7595348 3'utr CG1358 FlyBase G15637.1 CTTGCAAAACGATATACATATGTGAATGTAAATGTGTACTACGTGTATAAAAGTATTC 51 7595314 0.774482356 6 48 357 0.986666667 1.86923172 0.346666667 0.37254902 0.573333333 51 1 0 74 2R:7595291-7595348 6 30.5 2075 FBgn0033196 1712.173333 72.37333333 112.08 0.017813617 0.42142594 0.272127052 -15 -15 -15 0.01 dme-miR-965-3p 6mer3-8 TACGCT 2R 7595963 7595968 - 2R_7595963_7595968_- 1 1 1 0 CG1358 FBtr0088949|FBtr0088950|FBtr0303287|FBtr0088948 7595733|7595733|7595263|7595733 7596539|7596539|7596539|7596539 2R - 7595924 7595996 3'utr CG1358 FlyBase G20612.1 AGCGAATGCCGAATTACCAAACAGTAGCTACGCTGCTCTCGCCTTCGATTGATGTTCCCCCCTCCTTCCGCCT 9 7595946 0.977912721 6 8 51 0.9 0.954242509 0 0.111111111 0.2 9 1 0 9 2R:7595924-7595996 6 CG1358 FBtr0303287|FBtr0088948|FBtr0088949|FBtr0088950 7595263|7595733|7595733|7595733 7596539|7596539|7596539|7596539 TACGCT 6mer3-8 dme-miR-965-3p 2R - 7595926 7595978 3'utr CG1358 FlyBase G15639.1 AAACAGTAGCTACGCTGCTCTCGCCTTCGATTGATGTTCCCCCCTCCTTCCGC 6 7595963 0.954804687 3 6 31 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2R:7595926-7595978 6 4.5 2076 FBgn0033196 1712.173333 72.37333333 112.08 0.002628239 0.062177598 0.040149893 -22 -5 -13.5 0.01 dme-miR-190-5p 8mer-m1 ACATATCT 2R 7651658 7651665 - 2R_7651658_7651665_- 0.577627638 0.577627638 0.577627638 0 CG17985 FBtr0088946 7651623 7652111 2R - 7651640 7651700 3'utr CG17985 FlyBase G20626.1 GGGATAGTTTCTCTTACGCCAAAAAAGTACGTAATACATATCTTAGAGCTAAATAAATAGT 11 7651658 0.981616119 5 10 68 0.916666667 1.041392685 0.25 0.090909091 0.166666667 11 1 0 11 2R:7651640-7651700 8 CG17985 FBtr0088946 7651623 7652111 ACATATCT 8mer-m1 dme-miR-190-5p 2R - 7651648 7651677 3'utr CG17985 FlyBase G15651.1 AAAGTACGTAATACATATCTTAGAGCTAAA 6 7651658 0.766135231 2 5 31 1 0.954242509 0.222222222 0.333333333 0.555555556 6 0 0 9 2R:7651648-7651677 8 6.5 2077 FBgn0033199 98.75333333 8.186666667 12.54333333 0.065820563 0.793973941 0.518203561 -7 -7 -7 0.01 dme-miR-1008-3p 7mer-A1 GCTGTGA 2R 7651813 7651819 - 2R_7651813_7651819_- 0.823349562 0.823349562 0.823349562 0 CG17985 FBtr0088946 7651623 7652111 2R - 7651798 7651846 3'utr CG17985 FlyBase G20627.1 AATTGCAGGATTCTAAGATCCGATTGTGCTGTGAATATAAATCGTAACC 15 7651822 0.975540418 3 15 116 1 1.230448921 0.117647059 0.133333333 0.235294118 15 0 0 17 2R:7651798-7651846 7 CG17985 FBtr0088946 7651623 7652111 GCTGTGA 7mer-A1 dme-miR-1008-3p 2R - 7651805 7651832 3'utr CG17985 FlyBase G15652.1 AAGATCCGATTGTGCTGTGAATATAAAT 13 7651822 0.719316456 2 11 79 1 1.361727836 0.130434783 0.615384615 0.782608696 13 0 0 23 2R:7651805-7651832 7 14 2078 FBgn0033199 98.75333333 8.186666667 12.54333333 0.141767367 1.71009772 1.116130747 3 3 3 0.01 dme-miR-970-3p 6mer2-7 CTTATG 2R 7667359 7667364 - 2R_7667359_7667364_- 1 1 1 0 CG12042 FBtr0088944 7667246 7667400 2R - 7667312 7667410 stop_codon CG12042 FlyBase G20642.1 AGCCAACTAAACTGGAAACTTATTAGCCAACAGGCGTACTAATCGACTTATGCGAAATATGAAATATGCTTTATGAAAGCTAGAGAAATATGTATTTAT 23 7667368 0.970218556 10 22 126 0.965517241 1.447158031 0.034482759 0.173913043 0.344827586 23 1 0 28 2R:7667312-7667410 6 CG12042 FBtr0088944 7667246 7667400 CTTATG 6mer2-7 dme-miR-970-3p 2R - 7667327 7667386 3'utr CG12042 FlyBase G15662.1 AGCCAACAGGCGTACTAATCGACTTATGCGAAATATGAAATATGCTTTATGAAAGCTAGA 8 7667368 0.957780341 5 8 44 1 1.079181246 0.083333333 0.375 0.583333333 8 0 0 12 2R:7667327-7667386 6 9 2079 FBgn0033206 185.4566667 12.72666667 19.49666667 0.048528857 0.707176532 0.46161737 4 4 4 0.01 dme-miR-980-3p 6mer2-7 GCAGCT 2R 7675163 7675168 + 2R_7675163_7675168_+ 1 1 1 0 CG12107 FBtr0088924 7675089 7675362 2R + 7675136 7675209 3'utr CG12107 FlyBase G13632.1 ACACCACTCCACTCTCCACATAAGCCAGCAGCTCCTCTCGTTTTGTGTCCCCTTTGTACTCGCTGTAGATTGTT 16 7675178 0.987817994 10 15 136 1 1.361727836 0.347826087 0.1875 0.434782609 16 0 0 23 2R:7675136-7675209 6 CG12107 FBtr0088924 7675089 7675362 GCAGCT 6mer2-7 dme-miR-980-3p 2R + 7675132 7675201 3'utr CG12107 FlyBase G10384.1 CACCACACCACTCCACTCTCCACATAAGCCAGCAGCTCCTCTCGTTTTGTGTCCCCTTTGTACTCGCTGT 9 7675179 0.98999118 4 7 68 1 1.176091259 0.2 0.555555556 0.733333333 9 0 0 15 2R:7675132-7675201 6 8 2080 FBgn0033209 93.99 15.24666667 23.18666667 0.085115438 0.524704854 0.345025877 -15 -16 -15.5 0.01 dme-miR-968-5p 6mer2-7 CTACTT 2R 7677926 7677931 - 2R_7677926_7677931_- 0.999999918 0.999552363 0.99977614 0.00031643 CG1399 FBtr0088939|FBtr0300779|FBtr0088940 7677068|7677068|7677068 7677991|7677991|7677991 2R - 7677820 7677949 3'utr CG1399 FlyBase G20659.1 GCGATCAAAATTGGCTGGCTACTTCGCTTGGTTGATTTCGGTGCTCATCCTGTGCGTCTAACATTCGCATTTGCTGCATAGTGTGTATTCCTTAAGTTGTGTCGTATTAGCCAGTATGCCGCATTTTGCC 39 7677938 0.989672158 18 32 313 0.829787234 1.290034611 0.276595745 0.179487179 0.319148936 39 7 1 39 2R:7677820-7677949 6 CG1399 FBtr0088940|FBtr0300779|FBtr0088939 7677068|7677068|7677068 7677991|7677991|7677991 CTACTT 6mer2-7 dme-miR-968-5p 2R - 7677894 7677949 3'utr CG1399 FlyBase G15672.1 GCGATCAAAATTGGCTGGCTACTTCGCTTGGTTGATTTCGGTGCTCATCCTGTGCG 15 7677938 0.990804419 6 11 112 0.739130435 0.929418926 0.47826087 0.333333333 0.565217391 15 5 1 17 2R:7677894-7677949 6 16.5 2081 FBgn0033212 606.67 12.77333333 19.57 0.027197653 1.291753653 0.843127236 7 7 7 0.01 dme-miR-304-5p 7mer-A1 GAGATTA 2R 7716941 7716947 - 2R_7716941_7716947_- 0.823349562 0.823349562 0.823349562 0 CG18812 FBtr0088936 7716805 7719261 2R - 7716921 7716957 3'utr CG18812 FlyBase G20693.1 AATCGGAAACGAGATTAAGAATGATCGTCGTGGCACA 16 7716943 0.951843383 3 16 73 1 1.278753601 0.473684211 0.1875 0.315789474 16 0 0 19 2R:7716921-7716957 7 CG18812 FBtr0088936 7716805 7719261 GAGATTA 7mer-A1 dme-miR-304-5p 2R - 7716917 7716961 3'utr CG18812 FlyBase G15695.1 GTTAAATCGGAAACGAGATTAAGAATGATCGTCGTGGCACAAAAT 8 7716943 0.837867048 3 8 41 1 1.146128036 0.357142857 0.625 0.785714286 8 0 0 14 2R:7716917-7716961 7 12 2082 FBgn0042135 915.0533333 42.71666667 65.20333333 0.01311399 0.280920796 0.184039671 -4 -4 -4 0.01 dme-miR-190-5p 6mer3-8 ACATAT 2R 7718534 7718539 - 2R_7718534_7718539_- 1 1 1 0 CG18812 FBtr0330328|FBtr0306239|FBtr0330327|FBtr0088935|FBtr0088937|FBtr0088936 7718444|7718444|7718277|7718444|7718277|7716805 7719261|7719261|7719237|7719261|7719261|7719261 2R - 7718532 7718615 5'utr CG18812 FlyBase G20696.1 AATTACAAATTGTATTATTAATGTATTAATACTAGAGCTAACGCGTATGCAGTTTGATCCCCCGATATACATACATACATATAC 23 7718550 0.882619992 8 22 156 1 1.380211242 0.25 0.090909091 0.166666667 22 0 0 24 2R:7718532-7718615 6 CG18812 FBtr0306239|FBtr0330328|FBtr0088936|FBtr0088937|FBtr0088935|FBtr0330327 7718444|7718444|7716805|7718277|7718444|7718277 7719261|7719261|7719261|7719261|7719261|7719237 ACATAT 6mer3-8 dme-miR-190-5p 2R - 7718532 7718571 5'utr CG18812 FlyBase G15696.1 GTATGCAGTTTGATCCCCCGATATACATACATACATATAC 12 7718550 0.82412528 3 10 68 0.842105263 0.726998728 0.368421053 0.416666667 0.631578947 12 1 2 16 2R:7718532-7718571 6 7.5 2083 FBgn0042135 915.0533333 42.71666667 65.20333333 0.008196244 0.175575497 0.115024794 11 11 11 0.01 dme-miR-252-5p 6mer3-8 GTACTT 2R 7718684 7718689 - 2R_7718684_7718689_- 1 1 1 0 CG18812 FBtr0330328|FBtr0306239|FBtr0330327|FBtr0088935|FBtr0088937|FBtr0088936 7718444|7718444|7718277|7718444|7718277|7716805 7719261|7719261|7719237|7719261|7719261|7719261 2R - 7718661 7718783 5'utr CG18812 FlyBase G20697.1 AACGTTAGCAATGCTGAAGAAAATAAAATTTGATTAGAGACCCTGCATGTACCGGATATACACAAGATTATTCTAAATATGAAATTGATAAATTGTACTTGATACTTGATTACTGAAGGGAGA 33 7718690 0.97787248 10 33 221 1 1.556302501 0.194444444 0.060606061 0.138888889 33 0 0 36 2R:7718661-7718783 6 CG18812 FBtr0306239|FBtr0330328|FBtr0088936|FBtr0088937|FBtr0088935|FBtr0330327 7718444|7718444|7716805|7718277|7718444|7718277 7719261|7719261|7719261|7719261|7719261|7719237 GTACTT 6mer3-8 dme-miR-252-5p 2R - 7718583 7718698 5'utr CG18812 FlyBase G15697.1 TGATAAATTGTACTTGATACTTGATTACTGAAGGGAGACAGACGTATATATGAATAAGTATACATATTGTTAGTTATCTTTGCAATTACAAATTGTATTATTAATGTATTAATACT 13 7718690 0.987002199 8 13 120 1 1.322219295 0.142857143 0.461538462 0.666666667 13 0 0 21 2R:7718583-7718698 6 12 2084 FBgn0042135 915.0533333 42.71666667 65.20333333 0.01311399 0.280920796 0.184039671 1 1 1 0.01 dme-miR-31a-5p 6mer3-8 TCTTGC 2R 7737111 7737116 - 2R_7737111_7737116_- 1 1 1 0 CG30497 FBtr0331966 7737017 7740276 2R - 7737072 7737167 3'utr CG30497 FlyBase G20712.1 CTATATCTATACCATATACAACAATTACCATACATATTACTTCTGTGCGCTTCTTGCGATCTAAGGAATTTCAATAAAAACAAACAAAAATACCTA 74 7737114 0.987474166 16 72 637 0.97752809 1.939519253 0.078651685 0.175675676 0.314606742 74 2 0 87 2R:7737072-7737167 6 CG30497 FBtr0331966 7737017 7740276 TCTTGC 6mer3-8 dme-miR-31a-5p 2R - 7737052 7737167 3'utr CG30497 FlyBase G15707.1 CTATATCTATACCATATACAACAATTACCATACATATTACTTCTGTGCGCTTCTTGCGATCTAAGGAATTTCAATAAAAACAAACAAAAATACCTAAAAAGTATAAAACCGACGAA 57 7737114 0.941554859 15 53 447 0.962962963 1.892094603 0.111111111 0.315789474 0.518518519 57 3 0 78 2R:7737052-7737167 6 54.5 2085 FBgn0050497 2910.163333 68.06 105.1533333 0.018727471 0.800764032 0.51829075 -2 -2 -2 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 2R 7737616 7737621 - 2R_7737616_7737621_- 1 1 1 0 CG30497 FBtr0331966 7737017 7740276 2R - 7737604 7737734 3'utr CG30497 FlyBase G20714.1 AGGACGATCATCTGAATTGATCTGATTTGTCGGAATTCTTTGGTTTTGCCAGCTGCAATGAAGAGGTTTATTTCATGTTTGGGTCCCATAGCTAATGCCTGGGCTGGGCGGATTGTGTTTTTACATACAAT 48 7737622 0.82279337 18 44 389 0.945454545 1.716003344 0.181818182 0.145833333 0.254545455 48 3 0 52 2R:7737604-7737734 6 CG30497 FBtr0331966 7737017 7740276 TGTGTT 6mer3-8 dme-miR-317-3p 2R - 7737604 7737654 3'utr CG30497 FlyBase G15711.1 GGGTCCCATAGCTAATGCCTGGGCTGGGCGGATTGTGTTTTTACATACAAT 22 7737622 0.749093456 6 22 183 1 1.447158031 0.321428571 0.227272727 0.392857143 22 0 0 28 2R:7737604-7737654 6 22.5 2086 FBgn0050497 2910.163333 68.06 105.1533333 0.007731525 0.330590655 0.213973245 1 1 1 0.01 dme-miR-184-5p 6mer3-8 TGATAA 2R 7738719 7738724 - 2R_7738719_7738724_- 1 1 1 0 CG30497 FBtr0331966|FBtr0088933|FBtr0088934 7737017|7737766|7737766 7740276|7740276|7740276 2R - 7738555 7738790 3'utr CG30497 FlyBase G20719.1 AGACGAAGGCGGCGTTTTGGGTTCCAGTCTAGAAATTCCAAGCAACAATCTAATTGCAGGCTGAAATGATAATTTAAAGCGATGATATGTAAATATTAGTCAAATTAATATGTGGACGAGGATTCGGAAGTGTAGAGGATTTATATATATATATATATATATGTGTCTGGTGTACCAGAAGTTGCTCAATGAAATTCAATCCACAAAGCAAAGTTAAACCGAAATAAATTTTAAAG 119 7738724 0.976392336 32 112 723 0.932885906 1.540954809 0.201342282 0.159663866 0.32885906 119 7 3 139 2R:7738555-7738790 6 CG30497 FBtr0088934|FBtr0088933|FBtr0331966 7737766|7737766|7737017 7740276|7740276|7740276 TGATAA 6mer3-8 dme-miR-184-5p 2R - 7738647 7738784 3'utr CG30497 FlyBase G15716.2 AGGCGGCGTTTTGGGTTCCAGTCTAGAAATTCCAAGCAACAATCTAATTGCAGGCTGAAATGATAATTTAAAGCGATGATATGTAAATATTAGTCAAATTAATATGTGGACGAGGATTCGGAAGTGTAGAGGATTTAT 64 7738724 0.848749464 15 62 371 0.978723404 1.963787827 0.063829787 0.34375 0.553191489 64 2 0 92 2R:7738647-7738784 6 51 2087 FBgn0050497 2910.163333 68.06 105.1533333 0.01752479 0.749338819 0.485006023 0 0 0 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT 2R 7738967 7738972 - 2R_7738967_7738972_- 1 1 1 0 CG30497 FBtr0331966|FBtr0088933|FBtr0088934 7737017|7737766|7737766 7740276|7740276|7740276 2R - 7738922 7738994 3'utr CG30497 FlyBase G20720.1 ATAAACCTACCCAAACACTCAAAGCTGTAATGTAATTTTGGATTTGCCAACCACCCACATGTCCCCGCACACC 20 7738958 0.984258239 7 19 140 0.956521739 1.342422681 0 0.15 0.260869565 20 1 0 22 2R:7738922-7738994 6 CG30497 FBtr0088934|FBtr0088933|FBtr0331966 7737766|7737766|7737017 7740276|7740276|7740276 AGCTGT 6mer3-8 dme-miR-1008-3p 2R - 7738952 7738989 3'utr CG30497 FlyBase G15717.1 CCTACCCAAACACTCAAAGCTGTAATGTAATTTTGGAT 6 7738958 0.984454619 2 5 45 0.888888889 0.903089987 0 0.333333333 0.555555556 6 1 0 8 2R:7738952-7738989 6 10.5 2088 FBgn0050497 2910.163333 68.06 105.1533333 0.003608045 0.154275639 0.099854181 -14 -14 -14 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 2R 7739315 7739321 - 2R_7739315_7739321_- 0.823349562 0.823349562 0.823349562 0 CG30497 FBtr0088932|FBtr0331966|FBtr0088933|FBtr0088934 7739112|7737017|7737766|7737766 7740276|7740276|7740276|7740276 2R - 7739275 7739445 3'utr CG30497 FlyBase G20721.1 ATTTCACTGTTCCTTTTCTATATCTCTAATTGAATGTGTCCGGCGACTTGAAAGCCTTTCCACGACACTTGGCACACACGCGCTCCTACTTTAATAATGTAACTATCCCGAGAGTTTGAACCGCAGACTGAACTTCAGCCGCTGTTAGATGTTGAACAGGGACACCACCTA 93 7739329 0.985039344 31 75 599 0.814159292 1.662757832 0.203539823 0.182795699 0.327433628 93 20 1 92 2R:7739275-7739445 7 CG30497 FBtr0088934|FBtr0088933|FBtr0331966|FBtr0088932 7737766|7737766|7737017|7739112 7740276|7740276|7740276|7740276 AGACTGA 7mer-A1 dme-miR-14-3p 2R - 7739291 7739501 3'utr CG30497 FlyBase G15718.1 CATTACTCATATATTCGGTTGGCTACTTTCTTCGTTAACTGTATGATCAGAGGTCTATTTCACTGTTCCTTTTCTATATCTCTAATTGAATGTGTCCGGCGACTTGAAAGCCTTTCCACGACACTTGGCACACACGCGCTCCTACTTTAATAATGTAACTATCCCGAGAGTTTGAACCGCAGACTGAACTTCAGCCGCTGTTAGATGTTGA 57 7739312 0.985806849 19 43 370 0.755555556 1.531478917 0.266666667 0.385964912 0.611111111 57 21 1 68 2R:7739291-7739501 7 42.5 2089 FBgn0050497 2910.163333 68.06 105.1533333 0.014603991 0.624449016 0.404171686 8 -9 -0.5 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 2R 7787887 7787892 + 2R_7787887_7787892_+ 1 1 1 0 CanB2 FBtr0088930|FBtr0309866 7787760|7787760 7788135|7789053 2R + 7787792 7787921 3'utr CanB2 FlyBase G13646.1 GATGTTATTTATTTATTTTATACACGTCGGCATCCTTCGATTGTCACTATCACCACTATTCATATGGTTATTATTTTTGATCGGCGATTCTCTATAGTTAAATATTGTTATGAGCCTTTGGCGAGCCAGT 30 7787908 0.994383499 17 19 255 0.666666667 1.079181246 0.194444444 0.133333333 0.277777778 30 11 1 24 2R:7787792-7787921 6 CanB2 FBtr0309866 7787760 7789053 AGTTAA 6mer3-8 dme-miR-999-3p 2R + 7787836 7787925 3'utr CanB2 FlyBase G10396.2 CACTATCACCACTATTCATATGGTTATTATTTTTGATCGGCGATTCTCTATAGTTAAATATTGTTATGAGCCTTTGGCGAGCCAGTTCAG 20 7787885 0.994248481 7 9 104 0.482758621 0.669006781 0.24137931 0.4 0.586206897 20 13 2 14 2R:7787836-7787925 6 5.5 2090 FBgn0015614 671.95 42.17666667 64.64333333 0.008185133 0.130403857 0.085082246 -21 2 -9.5 0.01 dme-miR-308-3p 8mer-m1 CTGTGATT 2R 7788280 7788287 + 2R_7788280_7788287_+ 0.385560641 0.385560641 0.385560641 0 CanB2 FBtr0309866 7787760 7789053 2R + 7788233 7788308 3'utr CanB2 FlyBase G13648.1 CGAATGCACTTTCGCTCTATCATATTGATGTTATATTTCTAATTCTCCTGTGATTTTGCCAAAAACAAAACAAAAA 82 7788287 0.989321651 11 79 759 0.970588235 1.694605199 0.137254902 0.219512195 0.37254902 82 2 1 99 2R:7788233-7788308 8 CanB2 FBtr0309866 7787760 7789053 CTGTGATT 8mer-m1 dme-miR-308-3p 2R + 7788231 7788312 3'utr CanB2 FlyBase G10397.1 ATCGAATGCACTTTCGCTCTATCATATTGATGTTATATTTCTAATTCTCCTGTGATTTTGCCAAAAACAAAACAAAAAAAAA 72 7788287 0.989852015 11 70 690 0.97029703 1.991226076 0.148514851 0.333333333 0.524752475 72 3 0 98 2R:7788231-7788312 8 72.5 2091 FBgn0015614 671.95 42.17666667 64.64333333 0.107894933 1.71895993 1.1215387 -7 -7 -7 0.01 dme-miR-1002-5p 6mer3-8 CTACTT 2R 7788481 7788486 + 2R_7788481_7788486_+ 0.773949045 0.99996378 0.886956412 0.159816598 CanB2 FBtr0309866 7787760 7789053 2R + 7788419 7788557 3'utr CanB2 FlyBase G13649.1 GGTCTCCTCTATTGACTTAGTCTTATTTACACGTTGTGTACTTTTTATATATTTATACATACCTACTTGTACTAATCGAATGTTATAACCTACGTAACGTATTTTTATATATCTTGACTAACTTGATAACACCAGAGGA 21 7788485 0.987525644 13 17 158 0.88 0.865301426 0.32 0.19047619 0.32 21 1 2 22 2R:7788419-7788557 6 CanB2 FBtr0309866 7787760 7789053 CTACTT 6mer3-8 dme-miR-1002-5p 2R + 7788411 7788563 3'utr CanB2 FlyBase G10398.2 CCGAAGGAGGTCTCCTCTATTGACTTAGTCTTATTTACACGTTGTGTACTTTTTATATATTTATACATACCTACTTGTACTAATCGAATGTTATAACCTACGTAACGTATTTTTATATATCTTGACTAACTTGATAACACCAGAGGAAGGCGA 23 7788485 0.986639035 11 18 187 0.838709677 1.113943352 0.129032258 0.304347826 0.483870968 23 4 1 26 2R:7788411-7788563 6 6 2092 FBgn0015614 671.95 42.17666667 64.64333333 0.008929236 0.142258753 0.092816996 -4 -4 -4 0.01 dme-miR-277-3p 6mer3-8 TGCATT 2R 7788914 7788919 + 2R_7788914_7788919_+ 0.999977354 1 0.999988677 1.60E-05 CanB2 FBtr0309866 7787760 7789053 2R + 7788910 7788955 3'utr CanB2 FlyBase G13651.1 CCATTGCATTATTCAAAGTAATCGACTCGAGGTCGTATCTCATTGT 18 7788931 0.808221542 3 18 105 1 1.278753601 0.473684211 0.055555556 0.105263158 18 0 0 19 2R:7788910-7788955 6 CanB2 FBtr0309866 7787760 7789053 TGCATT 6mer3-8 dme-miR-277-3p 2R + 7788917 7788963 3'utr CanB2 FlyBase G10401.1 ATTATTCAAAGTAATCGACTCGAGGTCGTATCTCATTGTAAAATGGT 11 7788931 0.809163645 5 11 66 1 1.230448921 0.294117647 0.363636364 0.588235294 11 0 0 17 2R:7788917-7788963 2 2.5 2093 FBgn0015614 671.95 42.17666667 64.64333333 0.003720515 0.05927448 0.038673748 -17 -17 -17 0.01 dme-miR-33-5p 7mer-m8 CAATGCA 2R 7800854 7800860 - 2R_7800854_7800860_- 0.674515173 0.674515173 0.674515173 0 Nop17l FBtr0088901|FBtr0088902|FBtr0088900 7800783|7800783|7800783 7801442|7801442|7801442 2R - 7800789 7800883 3'utr Nop17l FlyBase G20758.1 ATGTTTAGAAGCACTGGCTGAATCAATGCATGTAATTTTAACTTTTATAAGCGAGCTGCAAGTTAAAATACATATACATCTCTTATGAATGAGAA 115 7800861 0.986669353 11 112 968 0.946564885 1.792391689 0.198473282 0.113043478 0.221374046 115 6 1 124 2R:7800789-7800883 7 Nop17l FBtr0088902|FBtr0088900|FBtr0088901 7800783|7800783|7800783 7801442|7801442|7801442 CAATGCA 7mer-m8 dme-miR-33-5p 2R - 7800838 7800893 3'utr Nop17l FlyBase G15746.1 AGCTACGTACATGTTTAGAAGCACTGGCTGAATCAATGCATGTAATTTTAACTTTT 66 7800861 0.745426149 10 65 448 0.990291262 2.008600172 0.213592233 0.439393939 0.640776699 66 1 0 102 2R:7800838-7800893 7 84 2094 FBgn0033224 692.0466667 23.42333333 35.88666667 0.121379098 3.586167639 2.340702211 1 1 1 0.01 dme-miR-8-3p 7mer-A1 AGTATTA 2R 7800931 7800937 - 2R_7800931_7800937_- 0.823349541 0.820137016 0.821743279 0.002271581 Nop17l FBtr0088901|FBtr0088902|FBtr0088900 7800783|7800783|7800783 7801442|7801442|7801442 2R - 7800903 7801011 3'utr Nop17l FlyBase G20759.1 TGGCTCCATGCTCAGCTCATATAACAATCATAACACGATAAACCTAAACAATATCAATAGTTAACAATTCCTCTAGTATTACACACAACAAAATCACCCAATGCATAAG 26 7800937 0.974049211 13 23 153 0.911764706 1.190331698 0.029411765 0.192307692 0.382352941 26 2 1 31 2R:7800903-7801011 7 Nop17l FBtr0088902|FBtr0088900|FBtr0088901 7800783|7800783|7800783 7801442|7801442|7801442 AGTATTA 7mer-A1 dme-miR-8-3p 2R - 7800898 7800955 3'utr Nop17l FlyBase G15747.1 ATAGTTAACAATTCCTCTAGTATTACACACAACAAAATCACCCAATGCATAAGTAGAG 9 7800938 0.757729228 4 7 45 0.714285714 0.698970004 0 0.444444444 0.642857143 9 3 1 10 2R:7800898-7800955 7 9.5 2095 FBgn0033224 692.0466667 23.42333333 35.88666667 0.013727398 0.405578483 0.264722274 0 1 0.5 0.01 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA 2R 7801081 7801088 - 2R_7801081_7801088_- 0.627007348 0.627007348 0.627007348 0 Nop17l FBtr0088901|FBtr0088902|FBtr0088900 7800783|7800783|7800783 7801442|7801442|7801442 2R - 7801051 7801118 3'utr Nop17l FlyBase G20760.1 TATAGATCGATAATTTCATATTCATTCTCATTGAAGAACACACAACAATGATGTCTTACAAGTTAGCA 14 7801097 0.913425905 7 14 111 1 1.230448921 0 0.214285714 0.352941176 14 0 0 17 2R:7801051-7801118 8 Nop17l FBtr0088902|FBtr0088900|FBtr0088901 7800783|7800783|7800783 7801442|7801442|7801442 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p 2R - 7801052 7801107 3'utr Nop17l FlyBase G15748.1 AATTTCATATTCATTCTCATTGAAGAACACACAACAATGATGTCTTACAAGTTAGC 10 7801063 0.962585138 3 9 48 1 1.176091259 0.066666667 0.3 0.533333333 10 0 0 15 2R:7801052-7801107 8 8.5 2096 FBgn0033224 692.0466667 23.42333333 35.88666667 0.012282409 0.362886011 0.236856771 9 -25 -8 0.01 dme-miR-965-3p 6mer3-8 TACGCT 2R 7801142 7801147 - 2R_7801142_7801147_- 1 1 1 0 Nop17l FBtr0088901|FBtr0088902|FBtr0088900 7800783|7800783|7800783 7801442|7801442|7801442 2R - 7801127 7801159 3'utr Nop17l FlyBase G20761.1 AAGATGAAATCCTACGCTGAACTGAAAAAGAAA 14 7801144 0.871131382 4 12 45 0.8125 1.113943352 0.3125 0.142857143 0.25 14 3 0 13 2R:7801127-7801159 6 Nop17l FBtr0088902|FBtr0088900|FBtr0088901 7800783|7800783|7800783 7801442|7801442|7801442 TACGCT 6mer3-8 dme-miR-965-3p 2R - 7801111 7801155 3'utr Nop17l FlyBase G15748.2 TGAAATCCTACGCTGAACTGAAAAAGAAACCTATTATTATAGATC 11 7801146 0.724848605 4 9 50 0.823529412 0.84509804 0.294117647 0.454545455 0.647058824 11 2 1 14 2R:7801111-7801155 6 12 2097 FBgn0033224 692.0466667 23.42333333 35.88666667 0.017339871 0.512309663 0.33438603 -3 -1 -2 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT 2R 7809438 7809443 + 2R_7809438_7809443_+ 1 1 1 0 sax FBtr0308825|FBtr0088832|FBtr0088833 7809418|7809418|7809418 7810067|7810067|7810067 2R + 7809271 7809455 stop_codon sax FlyBase G13672.1 TAATGACTGGCATGTCCAAGCTCATGAAGGAGTGCTGGCACCAAAACCCCGACGTGCGCTTGCCAGCGCTGCGCATCAAAAAGACTATACATAAGCTGGCTTCCGCTGACGAGAAGATACGCCTGGACTTCGACGAGGTCTGCGTTTAGTGGTAGTAGTCGAGCCTTAGCTGTAAGCGGTAATTT 164 7809436 0.833178411 21 160 801 0.980099502 2.294466226 0.373134328 0.195121951 0.343283582 164 4 0 197 2R:7809271-7809455 6 sax FBtr0088833|FBtr0308825|FBtr0088832 7809418|7809418|7809418 7810067|7810067|7810067 AGCTGT 6mer3-8 dme-miR-1008-3p 2R + 7809317 7809451 stop_codon sax FlyBase G10408.1 CCCCGACGTGCGCTTGCCAGCGCTGCGCATCAAAAAGACTATACATAAGCTGGCTTCCGCTGACGAGAAGATACGCCTGGACTTCGACGAGGTCTGCGTTTAGTGGTAGTAGTCGAGCCTTAGCTGTAAGCGGTA 115 7809436 0.918995346 11 113 625 0.983146067 1.765916794 0.494382022 0.382608696 0.601123596 115 1 2 175 2R:7809317-7809451 6 70 2098 FBgn0003317 608.98 30.24 46.27666667 0.114946304 2.314814815 1.51264136 2 2 2 0.01 dme-miR-278-3p 6mer2-7 CCACCG 2R 7809664 7809669 + 2R_7809664_7809669_+ 1 1 1 0 sax FBtr0308825|FBtr0088832|FBtr0088833 7809418|7809418|7809418 7810067|7810067|7810067 2R + 7809469 7809786 3'utr sax FlyBase G13673.1 AGGTAGTCTAAGATTCATTCATTGACATACCCTGCATTTCACACTATTAGTTCGTAGGTATATTATTCAAAGCTAAGCCAAGATCCTGCGTGTTGAAGCAAACTAATCCAAGTACAAGACCCTTGGGAGCTTATAGTTATATAGAAGACTTTAACATATTTACTTTATGTTTGGATTGACTTTATCGTTTCCGTTCCACCGTGAGCCTAGCCTGAAAAGGGTGCCTTTGAAATTGCCTTAAGTTAAAGTTAGCATCGACTCTAATGTATGTTCTTGGGATATCATCCTGTAAAGTTGTCATTTCACTATTTACCATTA 304 7809657 0.988428222 45 290 2672 0.945054945 1.934498451 0.31043956 0.174342105 0.31043956 304 17 3 344 2R:7809469-7809786 6 sax FBtr0088833|FBtr0308825|FBtr0088832 7809418|7809418|7809418 7810067|7810067|7810067 CCACCG 6mer2-7 dme-miR-278-3p 2R + 7809575 7809750 3'utr sax FlyBase G10410.1 TCCAAGTACAAGACCCTTGGGAGCTTATAGTTATATAGAAGACTTTAACATATTTACTTTATGTTTGGATTGACTTTATCGTTTCCGTTCCACCGTGAGCCTAGCCTGAAAAGGGTGCCTTTGAAATTGCCTTAAGTTAAAGTTAGCATCGACTCTAATGTATGTTCTTGGGATAT 145 7809657 0.987145729 26 136 1194 0.948837209 1.531478917 0.451162791 0.372413793 0.576744186 145 6 5 204 2R:7809575-7809750 6 160.5 2099 FBgn0003317 608.98 30.24 46.27666667 0.263555453 5.307539683 3.468270547 7 7 7 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 2R 7810003 7810009 + 2R_7810003_7810009_+ 0.782911824 0.782911824 0.782911824 0 sax FBtr0308825|FBtr0088832|FBtr0088833 7809418|7809418|7809418 7810067|7810067|7810067 2R + 7809790 7810065 3'utr sax FlyBase G13674.1 ATTGTTCATCAAGTGCCATTTGCAATTGAGAATTGTAAACGCCTTAACTTTAAGCTCACTCTTTGAACTTTACACTAAATTCATAACTCTAGAACTTGTCCATGCTATGATAAAACCATAAGCCACACCACCAACTGACTTGCTATCTTAGTTAGTTAAGCCTTTAGGACTTAGATACCCACGCATAGAAGCATACACACCTACTTGTATATTGTACAAATGGCAAGCTATTTAAGTTTTGTATAGTCTAAACGAAATGAAATACACGAATAGGCA 152 7810000 0.94802794 36 146 1070 0.974747475 2.285557309 0.126262626 0.263157895 0.434343434 152 5 0 193 2R:7809790-7810065 7 sax FBtr0088833|FBtr0308825|FBtr0088832 7809418|7809418|7809418 7810067|7810067|7810067 GTACAAA 7mer-A1 dme-miR-305-5p 2R + 7809783 7810060 3'utr sax FlyBase G10411.1 ATTATTCATTGTTCATCAAGTGCCATTTGCAATTGAGAATTGTAAACGCCTTAACTTTAAGCTCACTCTTTGAACTTTACACTAAATTCATAACTCTAGAACTTGTCCATGCTATGATAAAACCATAAGCCACACCACCAACTGACTTGCTATCTTAGTTAGTTAAGCCTTTAGGACTTAGATACCCACGCATAGAAGCATACACACCTACTTGTATATTGTACAAATGGCAAGCTATTTAAGTTTTGTATAGTCTAAACGAAATGAAATACACGAAT 104 7810001 0.982192411 26 96 712 0.891156463 1.640150041 0.081632653 0.288461538 0.496598639 104 14 2 131 2R:7809783-7810060 7 63 2100 FBgn0003317 608.98 30.24 46.27666667 0.103451673 2.083333333 1.361377224 3 2 2.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 7915134 7915140 - 2R_7915134_7915140_- 0.801970437 0.801970435 0.801970436 0 CG12159 FBtr0088889|FBtr0088889|FBtr0088889 7915025|7915025|7915025 7915167|7915167|7915167 2R - 7915045 7915158 3'utr CG12159 FlyBase G20817.1 AAGGAAAACAAAACCACTTGTGATAACGATTACGATGATATGTATGCAAGGCATTAAAAATCTCATAAATACCAATGCTTTCAAATCGCCTCTGCGTCGATGTTCCATATAAAT 60 7915141 0.963796414 14 56 290 0.950617284 1.40936947 0.135802469 0.266666667 0.456790123 60 2 2 77 2R:7915045-7915158 7 CG12159 FBtr0088889|FBtr0088889|FBtr0088889 7915025|7915025|7915025 7915167|7915167|7915167 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 7915083 7915159 3'utr CG12159 FlyBase G15799.1 AAAGGAAAACAAAACCACTTGTGATAACGATTACGATGATATGTATGCAAGGCATTAAAAATCTCATAAATACCAAT 33 7915141 0.937503461 7 33 130 1 1.633468456 0.046511628 0.303030303 0.465116279 33 0 0 43 2R:7915083-7915159 7 34 2101 FBgn0033232 247.6666667 34.99333333 53.14 0.137281292 0.971613641 0.639819345 1 1 1 0.01 dme-miR-92b-3p 8mer-m1 GTGCAATT 2R 7920582 7920589 + 2R_7920582_7920589_+ 0.596698355 0.596698356 0.596698355 0 Cul1 FBtr0088847|FBtr0088845|FBtr0088846|FBtr0088848 7920404|7920404|7920404|7920404 7920898|7920898|7921579|7920898 2R + 7920554 7920613 3'utr Cul1 FlyBase G13724.1 TAAAAATACTCCATGCTTCGCATAAAATGTGCAATTCTCGCCAACGCGTCACTAACTCCA 21 7920588 0.750688644 3 19 122 1 1.397940009 0 0.142857143 0.28 21 0 0 25 2R:7920554-7920613 8 Cul1 FBtr0088847|FBtr0088845|FBtr0088846|FBtr0088848 7920404|7920404|7920404|7920404 7920898|7920898|7921579|7920898 GTGCAATT 8mer-m1 dme-miR-92b-3p 2R + 7920553 7920688 3'utr Cul1 FlyBase G10451.1 CTAAAAATACTCCATGCTTCGCATAAAATGTGCAATTCTCGCCAACGCGTCACTAACTCCATCTTCCGACACCCAGCACCTCATTCAAAGAAAAGGCCAGTCGCAGGGATCAAGTGAACCTATTGACCAGATCACA 12 7920588 0.964820849 7 10 52 0.888888889 1.204119983 0.222222222 0.416666667 0.611111111 12 2 0 16 2R:7920553-7920688 8 10.5 2102 FBgn0015509 2248.283333 84.08 129.1466667 0.00467023 0.124881066 0.081302911 -6 -6 -6 0.01 dme-miR-283-5p 6mer3-8 TGATAT 2R 7929856 7929861 - 2R_7929856_7929861_- 1 1 1 0 CG30381 FBtr0113374|FBtr0339129 7929656|7929656 7929980|7929980 2R - 7929842 7929884 3'utr CG30381 FlyBase G20828.1 GTTTGCATAGAAAACTCACTTATTGATATAGTTAAAGCGACTT 9 7929865 0.827672349 4 9 71 1 1.041392685 0.181818182 0.222222222 0.363636364 9 0 0 11 2R:7929842-7929884 6 CG30381 FBtr0339129|FBtr0113374 7929656|7929656 7929980|7929980 TGATAT 6mer3-8 dme-miR-283-5p 2R - 7929829 7929891 3'utr CG30381 FlyBase G15807.1 ATATGCTGTTTGCATAGAAAACTCACTTATTGATATAGTTAAAGCGACTTCAGCAGCTTCGAA 9 7929864 0.984813254 7 9 71 1 1.079181246 0.083333333 0.333333333 0.5 9 0 0 12 2R:7929829-7929891 6 7 2103 FBgn0050381 66.98 6.973333333 10.62333333 0.104508809 1.003824092 0.65892689 4 3 3.5 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2R 7942171 7942177 - 2R_7942171_7942177_- 0.521223855 0.521223855 0.521223855 0 CG14764 FBtr0088880|FBtr0339128 7942041|7942041 7942634|7942634 2R - 7942153 7942203 3'utr CG14764 FlyBase G20843.1 ATAAAAACATCAAATGGCATACATTTTGTGATTGTATTTTATAGTTACTCA 160 7942179 0.672975227 9 152 1942 0.949748744 1.674401813 0.125628141 0.1875 0.346733668 160 7 3 189 2R:7942153-7942203 7 CG14764 FBtr0339128|FBtr0088880 7942041|7942041 7942634|7942634 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 7942121 7942201 3'utr CG14764 FlyBase G15816.1 AAAAACATCAAATGGCATACATTTTGTGATTGTATTTTATAGTTACTCACGCGTAGACAAACATATACAGTATATAAATAT 124 7942179 0.865553592 13 117 1413 0.946808511 1.551449998 0.14893617 0.362903226 0.579787234 124 6 4 178 2R:7942121-7942201 7 138 2104 FBgn0033236 872.35 39.06666667 59.99333333 0.158193386 3.532423208 2.300255584 2 2 2 0.01 dme-miR-7-5p 8mer-A1 GTCTTCCA 2R 7966217 7966224 + 2R_7966217_7966224_+ 0.671663466 0.674617924 0.673140695 0.002089076 nito FBtr0088857 7965281 7966686 2R + 7966175 7966251 3'utr nito FlyBase G13747.1 GCTGGCGATTCCATATCGTGTTCCGATCCCCGATCAATATCCGTCTTCCATCCGAAGAGAGAACGTCGTGTAGCATT 18 7966194 0.741906853 8 14 108 0.8 1 0.28 0.277777778 0.48 18 4 1 20 2R:7966175-7966251 8 nito FBtr0088857 7965281 7966686 GTCTTCCA 8mer-A1 dme-miR-7-5p 2R + 7966174 7966248 3'utr nito FlyBase G10467.1 GGCTGGCGATTCCATATCGTGTTCCGATCCCCGATCAATATCCGTCTTCCATCCGAAGAGAGAACGTCGTGTAGC 14 7966220 0.972382223 6 14 87 1 1.322219295 0.238095238 0.5 0.666666667 14 0 0 21 2R:7966174-7966248 8 10 2105 FBgn0027548 736.9233333 25.16 38.30666667 0.013569933 0.39745628 0.261051166 23 -3 10 0.01 dme-miR-282-5p 6mer3-8 AGAGGC 2R 7969139 7969144 - 2R_7969139_7969144_- 1 1 1 0 CG8726 FBtr0088874|FBtr0088873|FBtr0301231 7968127|7968127|7968127 7969258|7969258|7969823 2R - 7969131 7969172 3'utr CG8726 FlyBase G20867.1 ACTAATCGAATTCCAAAAGCTACATTTTAGAGGCATATTAAG 7 7969162 0.815869123 4 6 42 0.909090909 1 0 0.571428571 0.727272727 7 1 0 10 2R:7969131-7969172 6 CG8726 FBtr0301231|FBtr0088874|FBtr0088873 7968127|7968127|7968127 7969823|7969258|7969258 AGAGGC 6mer3-8 dme-miR-282-5p 2R - 7969081 7969179 3'utr CG8726 FlyBase G15833.1 AACTTGAACTAATCGAATTCCAAAAGCTACATTTTAGAGGCATATTAAGAAACAGAATACTAGCAGATCGAAGACACCGCTGAGCATAGAATAGTCCCA 9 7969162 0.970068225 6 9 49 1 1.113943352 0 0.444444444 0.615384615 9 0 0 13 2R:7969081-7969179 6 3.5 2106 FBgn0033244 852.3333333 30.71666667 47.01 0.004106375 0.113944655 0.074452244 18 18 18 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT 2R 8075716 8075721 + 2R_8075716_8075721_+ 1 1 1 0 lig FBtr0330630 8075416 8078815 2R + 8075698 8075762 3'utr lig FlyBase G13790.1 AGTGCGCCCATGCTAAATGTTCCTTACGCCTACTTCTATGGTGGCAATGTAATGCCCGGTAGTTT 41 8075715 0.824223447 7 38 279 0.936170213 1.342422681 0.106382979 0.175 0.29787234 40 2 1 44 2R:8075698-8075762 6 lig FBtr0330630 8075416 8078815 GTTCCT 6mer2-7 dme-miR-276a-3p 2R + 8075698 8075763 3'utr lig FlyBase G10492.1 AGTGCGCCCATGCTAAATGTTCCTTACGCCTACTTCTATGGTGGCAATGTAATGCCCGGTAGTTTT 31 8075715 0.898343073 5 29 198 0.976190476 1.311753861 0.095238095 0.3 0.5 30 0 1 41 2R:8075698-8075763 6 30 2107 FBgn0020279 5206.013333 127.7666667 197.3133333 0.005762567 0.234803026 0.152042437 1 1 1 0.01 dme-miR-14-3p 6mer2-7 AGACTG 2R 8076017 8076022 + 2R_8076017_8076022_+ 1 1 1 0 lig FBtr0330630 8075416 8078815 2R + 8075975 8076079 3'utr lig FlyBase G13792.1 AGGGCGGCTACTCGTCGAGCGTGAATCAGCAGAGCAAAACTCAGACTGTGTCCAACCAGTCGCAGGCAGGCACTGGATCCGATCTGACCTCTTCTATGTACGGAA 40 8076015 0.934436514 10 39 153 0.962264151 1.707570176 0.150943396 0.3 0.471698113 40 2 0 51 2R:8075975-8076079 6 lig FBtr0330630 8075416 8078815 AGACTG 6mer2-7 dme-miR-14-3p 2R + 8075976 8076037 3'utr lig FlyBase G10493.1 GGGCGGCTACTCGTCGAGCGTGAATCAGCAGAGCAAAACTCAGACTGTGTCCAACCAGTCGC 16 8076015 0.930839993 4 15 55 0.892857143 0.795880017 0.142857143 0.4375 0.678571429 16 0 3 25 2R:8075976-8076037 6 22.5 2108 FBgn0020279 5206.013333 127.7666667 197.3133333 0.004321925 0.17610227 0.114031828 2 2 2 0.01 dme-miR-308-3p 8mer-m1 CTGTGATT 2R 8076777 8076784 + 2R_8076777_8076784_+ 0.385560638 0.385517824 0.385539231 3.03E-05 lig FBtr0100575 8076675 8077042 2R + 8076764 8076800 3'utr lig FlyBase G13795.1 GTACACTTGTTGACTGTGATTACATATAGGTTTATGT 16 8076774 0.69163216 4 16 153 1 1.278753601 0.052631579 0.1875 0.315789474 16 0 0 19 2R:8076764-8076800 8 lig FBtr0100575 8076675 8077042 CTGTGATT 8mer-m1 dme-miR-308-3p 2R + 8076763 8076804 3'utr lig FlyBase G10497.1 TGTACACTTGTTGACTGTGATTACATATAGGTTTATGTCCTT 19 8076773 0.670633392 7 18 185 0.9375 1.477121255 0.03125 0.421052632 0.65625 19 2 0 30 2R:8076763-8076804 8 17.5 2109 FBgn0020279 5206.013333 127.7666667 197.3133333 0.003361497 0.136968432 0.088691421 3 4 3.5 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2R 8078291 8078297 + 2R_8078291_8078297_+ 0.733010513 0.808818836 0.770914675 0.053604563 lig FBtr0301917|FBtr0301917|FBtr0301916|FBtr0301916|FBtr0304681|FBtr0304681|FBtr0330630|FBtr0330630|FBtr0346957|FBtr0346957|FBtr0088776|FBtr0088776|FBtr0304682|FBtr0304682|FBtr0088775|FBtr0088775|FBtr0088774|FBtr0088774|FBtr0301915|FBtr0301915 8077828|8077828|8077828|8077828|8077828|8077828|8075416|8075416|8077828|8077828|8077828|8077828|8077828|8077828|8077828|8077828|8077828|8077828|8077828|8077828 8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815 2R + 8078269 8078382 stop_codon lig FlyBase G13798.1 ACGATGATAAGCGATCATACTTTACTTAATAAGAAACGTTTTTACTACGAACGCACTGTAAAGGCGCCGCTCAGCAGCGTCCTGACCACCACGCCTCCCTCCTCCCCTCAGCCT 18 8078289 0.963312528 6 18 92 1 1.255272505 0.055555556 0 0 18 0 0 18 2R:8078269-8078382 7 lig FBtr0088776|FBtr0088776|FBtr0088775|FBtr0088775|FBtr0301915|FBtr0301915|FBtr0330630|FBtr0330630|FBtr0304682|FBtr0304682|FBtr0346957|FBtr0346957|FBtr0088774|FBtr0088774|FBtr0304681|FBtr0304681|FBtr0301917|FBtr0301917|FBtr0301916|FBtr0301916 8077828|8077828|8077828|8077828|8077828|8077828|8075416|8075416|8077828|8077828|8077828|8077828|8077828|8077828|8077828|8077828|8077828|8077828|8077828|8077828 8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2R + 8078269 8078303 stop_codon lig FlyBase G10499.1 ACGATGATAAGCGATCATACTTTACTTAATAAGAA 7 8078288 0.743967529 4 6 43 0.9 0.954242509 0.4 0.285714286 0.5 7 1 0 9 2R:8078269-8078303 7 6 2110 FBgn0020279 5206.013333 127.7666667 197.3133333 0.001152513 0.046960605 0.030408487 2 3 2.5 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 2R 8078695 8078700 + 2R_8078695_8078700_+ 0.999999904 0.99999991 0.999999907 0 lig FBtr0301917|FBtr0301916|FBtr0304681|FBtr0330630|FBtr0346957|FBtr0088776|FBtr0330631|FBtr0304682|FBtr0088775|FBtr0088774|FBtr0301915 8077828|8077828|8077828|8075416|8077828|8077828|8078296|8077828|8077828|8077828|8077828 8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815 2R + 8078672 8078707 3'utr lig FlyBase G13800.1 AACCACAAACATAACGTGAATGAGAAAAAACAAAAC 8 8078692 0.846661893 3 8 16 1 0.954242509 0.444444444 0.125 0.222222222 8 0 0 9 2R:8078672-8078707 6 lig FBtr0088776|FBtr0330631|FBtr0088775|FBtr0301915|FBtr0330630|FBtr0304682|FBtr0346957|FBtr0088774|FBtr0304681|FBtr0301917|FBtr0301916 8077828|8078296|8077828|8077828|8075416|8077828|8077828|8077828|8077828|8077828|8077828 8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815 GAAAAA 6mer3-8 dme-miR-980-5p 2R + 8078671 8078705 3'utr lig FlyBase G10502.1 AAACCACAAACATAACGTGAATGAGAAAAAACAAA 11 8078692 0.884746274 3 11 21 1 1.322219295 0.142857143 0.545454545 0.761904762 11 0 0 21 2R:8078671-8078705 6 9 2111 FBgn0020279 5206.013333 127.7666667 197.3133333 0.00172877 0.070440908 0.045612731 3 3 3 0.01 dme-miR-8-3p 7mer-m8 CAGTATT 2R 8079042 8079048 - 2R_8079042_8079048_- 0.563266656 0.661615243 0.61244095 0.069542891 Vps28 FBtr0310370 8078867 8079317 2R - 8079028 8079081 3'utr Vps28 FlyBase G20923.1 CTAATAAAAGGTGCATCTTCAATCTTCATGGATCAGTATTTTGACGCATATAGG 13 8079041 0.939967458 6 11 106 0.882352941 0.875061263 0 0.307692308 0.470588235 13 1 1 15 2R:8079028-8079081 7 Vps28 FBtr0310370 8078867 8079317 CAGTATT 7mer-m8 dme-miR-8-3p 2R - 8079032 8079070 3'utr Vps28 FlyBase G15871.1 TGCATCTTCAATCTTCATGGATCAGTATTTTGACGCATA 10 8079049 0.956123103 6 9 71 0.866666667 0.636822098 0.133333333 0.4 0.6 10 0 2 13 2R:8079032-8079070 7 8.5 2112 FBgn0021814 287.86 39.29666667 59.69 0.029528243 0.216303334 0.142402412 -7 1 -3 0.01 dme-miR-283-5p 7mer-A1 GATATTA 2R 8079259 8079265 - 2R_8079259_8079265_- 0.782911824 0.782911824 0.782911824 0 Vps28 FBtr0310370 8078867 8079317 2R - 8079220 8079338 stop_codon Vps28 FlyBase G20924.1 AAGCTGCTGCACAGCCAGTAGCTATCAGTTTCTCATTGTTTACGTGTATCCCTAAATTTATATAGCATGTTCCGATATTAAACAAGTTTGATATATCACCTTACTTTTAGCGCAGACTA 31 8079271 0.989249939 10 28 273 0.923076923 1.255272505 0.076923077 0.258064516 0.41025641 31 2 1 36 2R:8079220-8079338 7 Vps28 FBtr0310370 8078867 8079317 GATATTA 7mer-A1 dme-miR-283-5p 2R - 8079245 8079325 stop_codon Vps28 FlyBase G15872.1 GCCAGTAGCTATCAGTTTCTCATTGTTTACGTGTATCCCTAAATTTATATAGCATGTTCCGATATTAAACAAGTTTGATAT 20 8079271 0.988412363 8 19 185 0.967741935 1.477121255 0.064516129 0.35 0.580645161 20 1 0 30 2R:8079245-8079325 7 16.5 2113 FBgn0021814 287.86 39.29666667 59.69 0.05731953 0.419882942 0.276428212 6 6 6 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 2R 8086793 8086799 + 2R_8086793_8086799_+ 0.782911824 0.782911824 0.782911824 0 sut1 FBtr0088777 8086579 8087151 2R + 8086770 8086806 3'utr sut1 FlyBase G13808.2 CCGCCTAGCCTGTAAGTTCTTTTGTACAAACCAATAA 9 8086791 0.68849166 2 8 69 1 1.113943352 0 0.222222222 0.461538462 9 0 0 13 2R:8086770-8086806 7 sut1 FBtr0088777 8086579 8087151 GTACAAA 7mer-A1 dme-miR-305-5p 2R + 8086772 8086805 3'utr sut1 FlyBase G10511.1 GCCTAGCCTGTAAGTTCTTTTGTACAAACCAATA 8 8086791 0.97754337 2 8 59 1 1.041392685 0 0.375 0.545454545 8 0 0 11 2R:8086772-8086805 7 8 2114 FBgn0028563 340.6433333 17.19333333 26.42666667 0.023484975 0.465296627 0.302724521 2 2 2 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT 2R 8101980 8101986 + 2R_8101980_8101986_+ 0.658999527 0.658999527 0.658999527 0 CG11210 FBtr0088781 8101903 8102306 2R + 8101947 8102058 3'utr CG11210 FlyBase G13825.1 TATCTACAAAAGCCACTAAGAACTTTTCAAGTTGGCAGCTTTGATTTGCATACGAAAGAATGACAGGAGGATAACAGCAAGGCAATTTGTGATACCTAAACCAGCCTCAATG 601 8101978 0.981650021 17 576 5224 0.959654179 1.64738297 0.103746398 0.141430948 0.25648415 601 14 14 666 2R:8101947-8102058 7 CG11210 FBtr0088781 8101903 8102306 GGCAGCT 7mer-m8 dme-miR-980-3p 2R + 8101952 8102056 3'utr CG11210 FlyBase G10524.1 ACAAAAGCCACTAAGAACTTTTCAAGTTGGCAGCTTTGATTTGCATACGAAAGAATGACAGGAGGATAACAGCAAGGCAATTTGTGATACCTAAACCAGCCTCAA 421 8101978 0.895021184 17 401 3635 0.958333333 1.562642679 0.106481481 0.363420428 0.586419753 421 11 16 621 2R:8101952-8102056 7 434.5 2115 FBgn0033259 595.3333333 24.97666667 38.03333333 0.729843225 17.39623649 11.42418931 2 2 2 0.01 dme-bantam-3p 6mer3-8 TGATCT 2R 8102109 8102114 + 2R_8102109_8102114_+ 1 1 1 0 CG11210 FBtr0088781 8101903 8102306 2R + 8102077 8102129 3'utr CG11210 FlyBase G13826.1 CTGCACGCGAAAGCGATAGCAATATTTATTTCTGATCTGTATATAATCTACCT 21 8102102 0.991404109 9 19 208 0.956521739 1.041392685 0.086956522 0.095238095 0.173913043 21 0 1 22 2R:8102077-8102129 6 CG11210 FBtr0088781 8101903 8102306 TGATCT 6mer3-8 dme-bantam-3p 2R + 8102065 8102145 3'utr CG11210 FlyBase G10525.1 TTAATATGACCCCTGCACGCGAAAGCGATAGCAATATTTATTTCTGATCTGTATATAATCTACCTAATTTCCCAATTTTAT 17 8102102 0.993665925 8 15 179 0.88 1.342422681 0 0.411764706 0.6 17 3 0 22 2R:8102065-8102145 6 16.5 2116 FBgn0033259 595.3333333 24.97666667 38.03333333 0.027715566 0.660616575 0.433829974 7 7 7 0.01 dme-miR-277-3p 6mer3-8 TGCATT 2R 8102254 8102259 + 2R_8102254_8102259_+ 1 1 1 0 CG11210 FBtr0088781 8101903 8102306 2R + 8102239 8102324 3'utr CG11210 FlyBase G13827.2 AAATGAAACACGAAGTGCATTATATTTTCAAGTAATTTTTTATTTATGGTAAATAAAAAACTATTAAGTTATGCGTATCTCTTTTT 9 8102259 0.989644327 7 8 68 1 1.079181246 0.166666667 0.222222222 0.416666667 9 0 0 12 2R:8102239-8102324 6 CG11210 FBtr0088781 8101903 8102306 TGCATT 6mer3-8 dme-miR-277-3p 2R + 8102180 8102264 3'utr CG11210 FlyBase G10526.1 CTGCTTAACAAAGGGCTCGACGCTGATTTTTTGAAGCAGTAATGCTGGTAATATTTTACAAATGAAACACGAAGTGCATTATATT 10 8102258 0.967804344 9 10 60 1 1.146128036 0.285714286 0.4 0.571428571 10 0 0 14 2R:8102180-8102264 6 3.5 2117 FBgn0033259 595.3333333 24.97666667 38.03333333 0.005879059 0.140130789 0.09202454 -5 -4 -4.5 0.01 dme-miR-283-5p 8mer-A1 TGATATTA 2R 8114367 8114374 - 2R_8114367_8114374_- 0.592192292 0.592192292 0.592192292 0 Asap FBtr0300954|FBtr0339300 8114284|8114284 8115265|8115265 2R - 8114315 8114423 3'utr Asap FlyBase G20953.1 ATTTTGTATACACGTTTCAGTATTTATTTAGCAAAACCTTAAAGCATATTGATATTATATGTAAGTCAAATAAACGGAAGAACATAACGCTTATTACATATATACACAT 93 8114376 0.835306613 14 86 843 0.93 1.667452953 0.14 0.064516129 0.13 93 6 1 93 2R:8114315-8114423 8 Asap FBtr0339300|FBtr0300954 8114284|8114284 8115265|8115265 TGATATTA 8mer-A1 dme-miR-283-5p 2R - 8114317 8114427 3'utr Asap FlyBase G15890.1 ACTCATTTTGTATACACGTTTCAGTATTTATTTAGCAAAACCTTAAAGCATATTGATATTATATGTAAGTCAAATAAACGGAAGAACATAACGCTTATTACATATATACAC 46 8114376 0.799174248 12 43 420 0.953846154 1.491361694 0.076923077 0.304347826 0.507692308 46 2 1 62 2R:8114317-8114427 8 27 2118 FBgn0050372 698.41 18.11666667 27.74 0.03865924 1.490340386 0.97332372 2 2 2 0.01 dme-miR-8-3p 7mer-m8 CAGTATT 2R 8114400 8114406 - 2R_8114400_8114406_- 0.661615243 0.661615243 0.661615243 0 Asap FBtr0300954|FBtr0339300 8114284|8114284 8115265|8115265 2R - 8114315 8114423 3'utr Asap FlyBase G20953.1 ATTTTGTATACACGTTTCAGTATTTATTTAGCAAAACCTTAAAGCATATTGATATTATATGTAAGTCAAATAAACGGAAGAACATAACGCTTATTACATATATACACAT 93 8114377 0.835306613 14 86 843 0.93 1.667452953 0.14 0.064516129 0.13 93 6 1 93 2R:8114315-8114423 7 Asap FBtr0339300|FBtr0300954 8114284|8114284 8115265|8115265 CAGTATT 7mer-m8 dme-miR-8-3p 2R - 8114317 8114427 3'utr Asap FlyBase G15890.1 ACTCATTTTGTATACACGTTTCAGTATTTATTTAGCAAAACCTTAAAGCATATTGATATTATATGTAAGTCAAATAAACGGAAGAACATAACGCTTATTACATATATACAC 46 8114408 0.799174248 12 43 420 0.953846154 1.491361694 0.076923077 0.304347826 0.507692308 46 2 1 62 2R:8114317-8114427 7 24 2119 FBgn0050372 698.41 18.11666667 27.74 0.034363769 1.32474701 0.86517664 -29 2 -13.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2R 8114589 8114594 - 2R_8114589_8114594_- 1 1 1 0 Asap FBtr0300954|FBtr0339300 8114284|8114284 8115265|8115265 2R - 8114567 8114617 3'utr Asap FlyBase G20956.1 AAAAAGAAGAGCAAAAGCCCTTTGTACCTAGAAGTTGTTACCAATTAAGTA 59 8114595 0.968369066 3 59 328 1 1.826074803 0.089552239 0.118644068 0.223880597 59 0 0 67 2R:8114567-8114617 6 Asap FBtr0339300|FBtr0300954 8114284|8114284 8115265|8115265 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2R - 8114568 8114614 3'utr Asap FlyBase G15891.1 AAGAAGAGCAAAAGCCCTTTGTACCTAGAAGTTGTTACCAATTAAGT 40 8114595 0.974265662 3 38 236 0.925925926 1.698970004 0.037037037 0.275 0.462962963 40 4 0 50 2R:8114568-8114614 6 49.5 2120 FBgn0050372 698.41 18.11666667 27.74 0.070875274 2.732290708 1.78442682 1 1 1 0.01 dme-miR-995-5p 6mer3-8 AATTCG 2R 8114925 8114930 - 2R_8114925_8114930_- 1 1 1 0 Asap FBtr0300954|FBtr0339300 8114284|8114284 8115265|8115265 2R - 8114908 8115028 3'utr Asap FlyBase G20959.1 AATCAAAGCCTTTAAGTAGCGATCTTGCTGTGCATTTCCCGTTGGCTTCCTTCATAAGGTTAGCGCTTTAATAACTGAATATGTCCTGCAAATGCTGTAATTCGTACCATAACTAGATCTA 84 8114936 0.878334542 17 81 670 0.95959596 1.977723605 0.090909091 0.154761905 0.282828283 84 4 0 95 2R:8114908-8115028 6 Asap FBtr0339300|FBtr0300954 8114284|8114284 8115265|8115265 AATTCG 6mer3-8 dme-miR-995-5p 2R - 8114838 8115076 3'utr Asap FlyBase G15892.1 AAGTTACTCTTAGCTTAGAAGCCAACTACTCATTTACACTTGTATTTCAATCAAAGCCTTTAAGTAGCGATCTTGCTGTGCATTTCCCGTTGGCTTCCTTCATAAGGTTAGCGCTTTAATAACTGAATATGTCCTGCAAATGCTGTAATTCGTACCATAACTAGATCTAACTTTAACTTAGCCTAAAACGCTGTGCGCAAAAGTTACTCAATGTCAGAAGAATTGTCGGGAGATAAGCT 82 8114936 0.892757701 29 78 627 0.944 1.594760753 0.112 0.353658537 0.576 82 5 2 118 2R:8114838-8115076 6 26.5 2121 FBgn0050372 698.41 18.11666667 27.74 0.037943328 1.46274149 0.955299207 6 6 6 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 8114997 8115002 - 2R_8114997_8115002_- 1 1 1 0 Asap FBtr0300954|FBtr0339300 8114284|8114284 8115265|8115265 2R - 8114908 8115028 3'utr Asap FlyBase G20959.1 AATCAAAGCCTTTAAGTAGCGATCTTGCTGTGCATTTCCCGTTGGCTTCCTTCATAAGGTTAGCGCTTTAATAACTGAATATGTCCTGCAAATGCTGTAATTCGTACCATAACTAGATCTA 84 8115003 0.878334542 17 81 670 0.95959596 1.977723605 0.090909091 0.154761905 0.282828283 84 4 0 95 2R:8114908-8115028 6 Asap FBtr0339300|FBtr0300954 8114284|8114284 8115265|8115265 GCTGTG 6mer2-7 dme-miR-1008-3p 2R - 8114838 8115076 3'utr Asap FlyBase G15892.1 AAGTTACTCTTAGCTTAGAAGCCAACTACTCATTTACACTTGTATTTCAATCAAAGCCTTTAAGTAGCGATCTTGCTGTGCATTTCCCGTTGGCTTCCTTCATAAGGTTAGCGCTTTAATAACTGAATATGTCCTGCAAATGCTGTAATTCGTACCATAACTAGATCTAACTTTAACTTAGCCTAAAACGCTGTGCGCAAAAGTTACTCAATGTCAGAAGAATTGTCGGGAGATAAGCT 82 8115004 0.892757701 29 78 627 0.944 1.594760753 0.112 0.353658537 0.576 82 5 2 118 2R:8114838-8115076 6 39.5 2122 FBgn0050372 698.41 18.11666667 27.74 0.056557037 2.180312787 1.423936554 1 2 1.5 0.01 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 8129316 8129322 + 2R_8129316_8129322_+ 0.820589782 0.823251741 0.821920761 0.001882248 Socs44A FBtr0088784 8128794 8129476 2R + 8129254 8129335 3'utr Socs44A FlyBase G13846.3 ATTTTTGTATTCCTAACTTGGACACTAACTTTTTGCTAATCTAGATTGCATGGAATTTAGGCAGCTTTACGGCAATCGAATA 90 8129320 0.760770134 13 84 578 0.964912281 1.740362689 0.175438596 0.211111111 0.377192982 90 3 1 110 2R:8129254-8129335 7 Socs44A FBtr0088784 8128794 8129476 AGCTTTA 7mer-A1 dme-miR-79-3p 2R + 8129293 8129378 3'utr Socs44A FlyBase G10542.1 TCTAGATTGCATGGAATTTAGGCAGCTTTACGGCAATCGAATACGTTCAATGCCAATTACTCTTGTTGCAACGTGTATGTATTTTA 74 8129320 0.778587119 12 71 510 0.963636364 2.025305865 0.236363636 0.405405405 0.6 74 4 0 106 2R:8129293-8129378 7 71.5 2123 FBgn0033266 360.15 23.80333333 36.32666667 0.198528391 3.003780983 1.968251055 -4 -4 -4 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2R 8134070 8134075 + 2R_8134070_8134075_+ 1 1 1 0 Pabp2 FBtr0088785 8133179 8134374 2R + 8134014 8134099 3'utr Pabp2 FlyBase G13856.1 GATGGCAAAAGCAAATAAAGAAGGAAGAAAATATAAAAAAAAAATCAAAAGAACACAAGACTCTTGGGAAAGAAGTAAATCAACAA 259 8134077 0.838609663 4 254 580 0.987421384 2.496929648 0.509433962 0.193050193 0.342767296 259 4 0 314 2R:8134014-8134099 6 Pabp2 FBtr0088785 8133179 8134374 AAGACT 6mer3-8 dme-miR-14-3p 2R + 8134046 8134094 3'utr Pabp2 FlyBase G10554.1 ATAAAAAAAAAATCAAAAGAACACAAGACTCTTGGGAAAGAAGTAAATC 163 8134077 0.579848835 3 161 365 0.987804878 1.908485019 0.548780488 0.374233129 0.585365854 163 1 2 243 2R:8134046-8134094 6 210 2124 FBgn0005648 3045.73 202.1266667 313.4 0.068948988 1.038952472 0.670070198 -7 -7 -7 0.01 dme-miR-1006-3p 7mer-A1 GAATTTA 2R 8134179 8134185 + 2R_8134179_8134185_+ 0.823349562 0.823349562 0.823349562 0 Pabp2 FBtr0088785 8133179 8134374 2R + 8134144 8134213 3'utr Pabp2 FlyBase G13857.1 ATATATAGAGTAAAGAGAAGATAAGAAAAGAAGTTGAATTTACTAAAGCGAAAAAGATGAAGACAAATAT 46 8134177 0.915174772 9 45 185 0.981132075 1.716003344 0.188679245 0.130434783 0.245283019 46 1 0 52 2R:8134144-8134213 7 Pabp2 FBtr0088785 8133179 8134374 GAATTTA 7mer-A1 dme-miR-1006-3p 2R + 8134145 8134205 3'utr Pabp2 FlyBase G10555.1 TATATAGAGTAAAGAGAAGATAAGAAAAGAAGTTGAATTTACTAAAGCGAAAAAGATGAAG 22 8134177 0.957730616 4 22 102 1 1.397940009 0.36 0.090909091 0.2 22 0 0 25 2R:8134145-8134205 7 25 2125 FBgn0005648 3045.73 202.1266667 313.4 0.008208213 0.123684818 0.079770262 2 2 2 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 2R 8137090 8137095 - 2R_8137090_8137095_- 0.999999964 1 0.999999982 0 Lpin FBtr0303583|FBtr0303573|FBtr0303584|FBtr0113055 8136984|8136984|8136984|8136984 8137486|8137486|8137486|8137486 2R - 8137019 8137157 3'utr Lpin FlyBase G20993.1 AGACGGCGCATAGGAGTTGTGATTTTGATTTCATTATTTTTCGTATGTGATCATTTAAATTAAGTTAATTGTGATGAGGTTTTTATTTGAAGTTTTTATGAAAACTGTGCTCTAAACCTATGTATACTTAACTGATAGT 283 8137090 0.822479914 30 253 2521 0.91954023 1.359021943 0.227011494 0.173144876 0.327586207 283 15 13 320 2R:8137019-8137157 6 Lpin FBtr0303573|FBtr0113055|FBtr0303583|FBtr0303584 8136984|8136984|8136984|8136984 8137486|8137486|8137486|8137486 AGTTAA 6mer3-8 dme-miR-999-3p 2R - 8136985 8137157 3'utr Lpin FlyBase G15918.1 AGACGGCGCATAGGAGTTGTGATTTTGATTTCATTATTTTTCGTATGTGATCATTTAAATTAAGTTAATTGTGATGAGGTTTTTATTTGAAGTTTTTATGAAAACTGTGCTCTAAACCTATGTATACTTAACTGATAGTGTTTCAATACCAATAAATGCTTCAAATTCAAACA 189 8137090 0.98958929 31 169 1771 0.876865672 1.416825353 0.23880597 0.285714286 0.496268657 189 25 8 235 2R:8136985-8137157 6 82 2126 FBgn0263593 1170.44 33.67 51.33333333 0.070059123 2.435402435 1.597402597 -5 -5 -5 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2R 8137134 8137140 - 2R_8137134_8137140_- 0.521223853 0.521223855 0.521223854 0 Lpin FBtr0303583|FBtr0303573|FBtr0303584|FBtr0113055 8136984|8136984|8136984|8136984 8137486|8137486|8137486|8137486 2R - 8137019 8137157 3'utr Lpin FlyBase G20993.1 AGACGGCGCATAGGAGTTGTGATTTTGATTTCATTATTTTTCGTATGTGATCATTTAAATTAAGTTAATTGTGATGAGGTTTTTATTTGAAGTTTTTATGAAAACTGTGCTCTAAACCTATGTATACTTAACTGATAGT 283 8137134 0.822479914 30 253 2521 0.91954023 1.359021943 0.227011494 0.173144876 0.327586207 283 15 13 320 2R:8137019-8137157 7 Lpin FBtr0303573|FBtr0113055|FBtr0303583|FBtr0303584 8136984|8136984|8136984|8136984 8137486|8137486|8137486|8137486 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 8136985 8137157 3'utr Lpin FlyBase G15918.1 AGACGGCGCATAGGAGTTGTGATTTTGATTTCATTATTTTTCGTATGTGATCATTTAAATTAAGTTAATTGTGATGAGGTTTTTATTTGAAGTTTTTATGAAAACTGTGCTCTAAACCTATGTATACTTAACTGATAGTGTTTCAATACCAATAAATGCTTCAAATTCAAACA 189 8137134 0.98958929 31 169 1771 0.876865672 1.416825353 0.23880597 0.285714286 0.496268657 189 25 8 235 2R:8136985-8137157 7 79 2127 FBgn0263593 1170.44 33.67 51.33333333 0.067495984 2.346302346 1.538961039 -6 -6 -6 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT 2R 8137196 8137201 - 2R_8137196_8137201_- 1 1 1 0 Lpin FBtr0303583|FBtr0303573|FBtr0303584|FBtr0113055 8136984|8136984|8136984|8136984 8137486|8137486|8137486|8137486 2R - 8137169 8137223 3'utr Lpin FlyBase G20993.2 TAATAGTGACTACTATAAGTATGTTCCTTTGAGACTCCCCGCAGGTTCGTAGATG 86 8137195 0.877702611 10 79 640 0.941176471 1.681241237 0.166666667 0.186046512 0.31372549 86 5 1 96 2R:8137169-8137223 6 Lpin FBtr0303573|FBtr0113055|FBtr0303583|FBtr0303584 8136984|8136984|8136984|8136984 8137486|8137486|8137486|8137486 GTTCCT 6mer2-7 dme-miR-276a-3p 2R - 8137159 8137219 3'utr Lpin FlyBase G15918.2 AGTGACTACTATAAGTATGTTCCTTTGAGACTCCCCGCAGGTTCGTAGATGATGCATATTC 64 8137195 0.774649765 9 60 456 0.913043478 1.447158031 0.076086957 0.34375 0.543478261 64 6 2 84 2R:8137159-8137219 6 67 2128 FBgn0263593 1170.44 33.67 51.33333333 0.05724343 1.98990199 1.305194805 -6 -6 -6 0.01 dme-miR-305-3p 6mer2-7 TGTGCC 2R 8138134 8138139 - 2R_8138134_8138139_- 1 1 1 0 Lpin FBtr0303577|FBtr0303585|FBtr0303575|FBtr0303578|FBtr0088815|FBtr0303574 8137986|8137986|8137986|8137986|8137986|8137986 8138234|8138234|8138234|8138234|8138234|8138234 2R - 8138109 8138172 3'utr Lpin FlyBase G20999.1 AAGAGAGTTAGGATTGTGCTATACCTGTATGTCTGTGCCTGATGTGCCAGGTCAGCGAGCTCCA 46 8138139 0.699495751 6 44 356 0.962264151 1.707570176 0.245283019 0.130434783 0.245283019 46 2 0 51 2R:8138109-8138172 6 Lpin FBtr0303578|FBtr0303575|FBtr0088815|FBtr0303574|FBtr0303577|FBtr0303585 8137986|8137986|8137986|8137986|8137986|8137986 8138234|8138234|8138234|8138234|8138234|8138234 TGTGCC 6mer2-7 dme-miR-305-3p 2R - 8138109 8138174 3'utr Lpin FlyBase G15922.1 TTAAGAGAGTTAGGATTGTGCTATACCTGTATGTCTGTGCCTGATGTGCCAGGTCAGCGAGCTCCA 29 8138139 0.709045539 8 28 221 0.97826087 1.653212514 0.173913043 0.379310345 0.608695652 29 1 0 45 2R:8138109-8138174 6 28.5 2129 FBgn0263593 1170.44 33.67 51.33333333 0.024349817 0.846450846 0.555194805 0 0 0 0.01 dme-miR-980-3p 6mer2-7 GCAGCT 2R 8138195 8138200 - 2R_8138195_8138200_- 1 1 1 0 Lpin FBtr0303577|FBtr0303585|FBtr0303575|FBtr0303578|FBtr0088815|FBtr0303574 8137986|8137986|8137986|8137986|8137986|8137986 8138234|8138234|8138234|8138234|8138234|8138234 2R - 8138189 8138220 3'utr Lpin FlyBase G21000.1 TAGCCCCAGTCGAAGGTTGTGCAGCTTGCAAA 5 8138203 0.718894525 3 5 21 1 0.698970004 0.2 0 0 5 0 0 5 2R:8138189-8138220 6 Lpin FBtr0303578|FBtr0303575|FBtr0088815|FBtr0303574|FBtr0303577|FBtr0303585 8137986|8137986|8137986|8137986|8137986|8137986 8138234|8138234|8138234|8138234|8138234|8138234 GCAGCT 6mer2-7 dme-miR-980-3p 2R - 8138188 8138225 3'utr Lpin FlyBase G15923.1 AGTCCTAGCCCCAGTCGAAGGTTGTGCAGCTTGCAAAT 11 8138194 0.956972445 4 11 55 1 1.113943352 0.076923077 0.181818182 0.307692308 11 0 0 13 2R:8138188-8138225 6 7.5 2130 FBgn0263593 1170.44 33.67 51.33333333 0.006407847 0.222750223 0.146103896 3 -6 -1.5 0.01 dme-miR-7-5p 6mer2-7 TCTTCC 2R 8161809 8161814 - 2R_8161809_8161814_- 1 1 1 0 RagC-D FBtr0088807 8161677 8161902 2R - 8161718 8161887 3'utr RagC-D FlyBase G21017.1 AAGCGGAGAGCCCCTTTTATTGCCCCCCTACGCTAGCTTCTCTGTGGACTCTTTGATTCCAATTTGTACGTTCTCTTCCGTTAAATCTGATGTTACCTTTGTCTATTGATACGTTAGGACGCCACTCTCACAGAGCAGCGTAAAAAATTGCCCAGCGGTTGAAATTATTG 54 8161797 0.966553619 14 52 440 0.968253968 1.785329835 0.079365079 0.12962963 0.253968254 54 2 0 61 2R:8161718-8161887 6 RagC-D FBtr0088807 8161677 8161902 TCTTCC 6mer2-7 dme-miR-7-5p 2R - 8161783 8161818 3'utr RagC-D FlyBase G15932.1 GTTCTCTTCCGTTAAATCTGATGTTACCTTTGTCTA 17 8161797 0.705608818 3 17 185 1 1.361727836 0.47826087 0.294117647 0.47826087 17 0 0 23 2R:8161783-8161818 6 9 2131 FBgn0033272 281 22.17 34.04333333 0.03202847 0.405953992 0.264368942 -17 -17 -17 0.01 dme-miR-965-3p 6mer3-8 TACGCT 2R 8161854 8161859 - 2R_8161854_8161859_- 1 0.999999999 0.999999999 0 RagC-D FBtr0088807 8161677 8161902 2R - 8161718 8161887 3'utr RagC-D FlyBase G21017.1 AAGCGGAGAGCCCCTTTTATTGCCCCCCTACGCTAGCTTCTCTGTGGACTCTTTGATTCCAATTTGTACGTTCTCTTCCGTTAAATCTGATGTTACCTTTGTCTATTGATACGTTAGGACGCCACTCTCACAGAGCAGCGTAAAAAATTGCCCAGCGGTTGAAATTATTG 54 8161867 0.966553619 14 52 440 0.968253968 1.785329835 0.079365079 0.12962963 0.253968254 54 2 0 61 2R:8161718-8161887 6 RagC-D FBtr0088807 8161677 8161902 TACGCT 6mer3-8 dme-miR-965-3p 2R - 8161832 8161883 3'utr RagC-D FlyBase G15933.1 GGAGAGCCCCTTTTATTGCCCCCCTACGCTAGCTTCTCTGTGGACTCTTTGA 11 8161867 0.793289881 6 10 78 0.923076923 1.079181246 0.230769231 0.181818182 0.307692308 11 1 0 12 2R:8161832-8161883 6 14.5 2132 FBgn0033272 281 22.17 34.04333333 0.051601423 0.654036987 0.425927739 8 8 8 0.01 dme-miR-184-5p 6mer3-8 TGATAA 2R 8225718 8225723 + 2R_8225718_8225723_+ 0.999999977 1 0.999999988 0 LRP1 FBtr0344893|FBtr0344894 8225414|8225414 8226438|8226438 2R + 8225693 8225820 3'utr LRP1 FlyBase G13938.1 GCTTACACGTTTTACAAGCGCCTTTTGATAAATGAATTTTTAACATACGTGAATCTGTGTATATCCGAAACGTTTTGTGGATCTGTAAATTTAGTAGTCGGTAGATTTAGTTATAGCCCACGAGCTGA 54 8225746 0.985992465 18 51 425 0.969230769 1.799340549 0.323076923 0.185185185 0.323076923 54 2 0 63 2R:8225693-8225820 6 LRP1 FBtr0344893|FBtr0344894 8225414|8225414 8226438|8226438 TGATAA 6mer3-8 dme-miR-184-5p 2R + 8225635 8225817 3'utr LRP1 FlyBase G10603.1 ACTCGGGCAGCCTTGCTCCCTTTGTTATGTCCCTAACGATGTCCTTATACTATTATTTGCTTACACGTTTTACAAGCGCCTTTTGATAAATGAATTTTTAACATACGTGAATCTGTGTATATCCGAAACGTTTTGTGGATCTGTAAATTTAGTAGTCGGTAGATTTAGTTATAGCCCACGAGC 43 8225716 0.980470707 20 36 347 0.879310345 1.230448921 0.344827586 0.279069767 0.465517241 43 5 2 51 2R:8225635-8225817 6 10.5 2133 FBgn0053087 1624.95 12.3 18.76333333 0.006461737 0.853658537 0.559602061 -28 2 -13 0.01 dme-miR-304-5p 7mer-m8 TGAGATT 2R 8225953 8225959 + 2R_8225953_8225959_+ 0.620203074 0.620203416 0.620203245 2.12E-07 LRP1 FBtr0344893|FBtr0344894 8225414|8225414 8226438|8226438 2R + 8225850 8225998 3'utr LRP1 FlyBase G13939.1 ATTGCCCAAAAGCAGCCTAGTTAACATTTAAACGGAGGAATCATTCGAGCACTCACTAACAATTTGCCAATTAGTGAATGCGGGCGAAATCGAAATCGCCTCTTGAGATTGACCAAATATGCATTTAAATTAATTAAGTATTCACAAAG 70 8225953 0.774345923 19 69 441 0.987654321 1.903089987 0.086419753 0.157142857 0.271604938 70 1 0 80 2R:8225850-8225998 7 LRP1 FBtr0344893|FBtr0344894 8225414|8225414 8226438|8226438 TGAGATT 7mer-m8 dme-miR-304-5p 2R + 8225850 8225990 3'utr LRP1 FlyBase G10604.1 ATTGCCCAAAAGCAGCCTAGTTAACATTTAAACGGAGGAATCATTCGAGCACTCACTAACAATTTGCCAATTAGTGAATGCGGGCGAAATCGAAATCGCCTCTTGAGATTGACCAAATATGCATTTAAATTAATTAAGTAT 47 8225953 0.909663925 14 45 257 0.958333333 1.838849091 0 0.446808511 0.638888889 47 3 0 69 2R:8225850-8225990 7 39 2134 FBgn0053087 1624.95 12.3 18.76333333 0.024000738 3.170731707 2.07852194 0 0 0 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2R 8239727 8239733 + 2R_8239727_8239733_+ 0.808818836 0.808818836 0.808818836 0 pnut FBtr0088793|FBtr0088793|FBtr0088792|FBtr0088792 8239675|8239675|8239675|8239675 8240297|8240297|8240297|8240297 2R + 8239701 8239796 3'utr pnut FlyBase G13947.2 CCCCAAACCCCCTTCCGCTCCTCGTATACTTAAGCGCTAATCTCGAGAACAAAGCAAATGAAAACCCTAGCGTATCCTACTCTTATTCCTACCACA 28 8239713 0.968880627 10 25 139 0.882352941 1 0.029411765 0.178571429 0.323529412 28 2 2 30 2R:8239701-8239796 7 pnut FBtr0088793|FBtr0088793|FBtr0088792|FBtr0088792 8239675|8239675|8239675|8239675 8240297|8240297|8240297|8240297 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2R + 8239702 8239750 3'utr pnut FlyBase G10614.1 CCCAAACCCCCTTCCGCTCCTCGTATACTTAAGCGCTAATCTCGAGAAC 14 8239713 0.96335942 4 14 75 1 1.204119983 0.3125 0.142857143 0.25 14 0 0 16 2R:8239702-8239750 7 9 2135 FBgn0013726 2422.526667 120.4666667 184.8733333 0.003715129 0.074709463 0.04868198 14 14 14 0.01 dme-miR-8-3p 7mer-m8 CAGTATT 2R 8239941 8239947 + 2R_8239941_8239947_+ 0.661615243 0.661615243 0.661615243 0 pnut FBtr0088793|FBtr0088792 8239675|8239675 8240297|8240297 2R + 8239918 8239961 3'utr pnut FlyBase G13949.1 GTACATATAACACATAGCAGTTGCAGTATTTTACCAATATATAT 38 8239938 0.820954135 4 38 304 1 1.62324929 0 0.105263158 0.19047619 38 0 0 42 2R:8239918-8239961 7 pnut FBtr0088793|FBtr0088792 8239675|8239675 8240297|8240297 CAGTATT 7mer-m8 dme-miR-8-3p 2R + 8239920 8239984 3'utr pnut FlyBase G10615.1 ACATATAACACATAGCAGTTGCAGTATTTTACCAATATATATCCACGCATTACTTGACGAAACAC 25 8239938 0.934903954 7 24 174 1 1.505149978 0 0.24 0.40625 25 0 0 32 2R:8239920-8239984 7 29.5 2136 FBgn0013726 2422.526667 120.4666667 184.8733333 0.012177369 0.244881018 0.159568714 3 3 3 0.01 dme-miR-1006-3p 7mer-A1 GAATTTA 2R 8597565 8597571 - 2R_8597565_8597571_- 0.823349562 0.823349562 0.823349562 0 CG8735 FBtr0339357|FBtr0088730 8596970|8597526 8597686|8597686 2R - 8597550 8597598 3'utr CG8735 FlyBase G21027.1 ATTTGAAAAAGAATCATCTGTTATCATGAATTTATTGTCGAAAAAAAAA 7 8597564 0.9807775 5 7 53 1 0.84509804 0.142857143 0 0 7 0 0 7 2R:8597550-8597598 7 CG8735 FBtr0339357|FBtr0088730 8596970|8597526 8597686|8597686 GAATTTA 7mer-A1 dme-miR-1006-3p 2R - 8597559 8597592 3'utr CG8735 FlyBase G15940.1 AAAAGAATCATCTGTTATCATGAATTTATTGTCG 7 8597572 0.664854065 4 5 66 0.818181818 0.954242509 0.454545455 0.428571429 0.636363636 7 2 0 9 2R:8597559-8597592 7 7 2137 FBgn0033309 330.0133333 24.15666667 37.01 0.021211264 0.289775079 0.189138071 -7 1 -3 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 8610969 8610976 + 2R_8610969_8610976_+ 0.500120318 0.500120318 0.500120318 0 rgr FBtr0088692|FBtr0339354 8610887|8610887 8611238|8612295 2R + 8610942 8610995 3'utr rgr FlyBase G13976.1 ATCGTAGGGCGTTAGATGTGTGTCCGTGTACTTAAAGTTATTTTGCCGTCTAGC 100 8610968 0.815166114 6 97 859 0.975 2.068185862 0.058333333 0.18 0.316666667 100 3 0 117 2R:8610942-8610995 8 rgr FBtr0088692|FBtr0339354 8610887|8610887 8611238|8612295 GTACTTAA 8mer-A1 dme-miR-252-5p 2R + 8610933 8611007 3'utr rgr FlyBase G10633.1 TACAAAGCAATCGTAGGGCGTTAGATGTGTGTCCGTGTACTTAAAGTTATTTTGCCGTCTAGCATATACCAATCA 91 8610968 0.951277547 8 87 756 0.957142857 2.127104798 0.035714286 0.384615385 0.6 91 6 0 134 2R:8610933-8611007 8 94 2138 FBgn0267792 576.07 20.24333333 30.99 0.163174614 4.643504034 3.033236528 1 1 1 0.01 dme-miR-263a-5p 7mer-m1 TGCCATT 2R 8623885 8623891 + 2R_8623885_8623891_+ 0.765586663 0.765586663 0.765586663 0 Cirl FBtr0290112|FBtr0305082|FBtr0305081|FBtr0301363|FBtr0310448 8623506|8623506|8623506|8623506|8623506 8625203|8625203|8625203|8624135|8625203 2R + 8623774 8623926 3'utr Cirl FlyBase G13988.1 TTGGAATCGGGCCCTTCGACTTGCATGCATTTTATACCAACTTGGAAATCGATATTAAATATAAATGTATGTACCATATATGTATGATGTATTGTAATACATGTCACCACATGCCATTTTTAAATACTTAAAAACTAATTTAAACAACCAGAA 25 8623885 0.988257074 12 21 191 0.9 1.431363764 0.166666667 0.2 0.333333333 25 3 0 27 2R:8623774-8623926 7 Cirl FBtr0305081|FBtr0301363|FBtr0310448|FBtr0290112|FBtr0305082 8623506|8623506|8623506|8623506|8623506 8625203|8624135|8625203|8625203|8625203 TGCCATT 7mer-m1 dme-miR-263a-5p 2R + 8623844 8623897 3'utr Cirl FlyBase G10644.1 GTACCATATATGTATGATGTATTGTAATACATGTCACCACATGCCATTTTTAAA 8 8623885 0.956786802 4 8 63 1 1.079181246 0.083333333 0.375 0.583333333 8 0 0 12 2R:8623844-8623897 7 7 2139 FBgn0033313 1194.753333 23.36 35.54 0.00585895 0.299657534 0.196961171 0 0 0 0.01 dme-miR-283-5p 6mer3-8 TGATAT 2R 8623986 8623991 + 2R_8623986_8623991_+ 1 1 1 0 Cirl FBtr0290112|FBtr0305082|FBtr0305081|FBtr0301363|FBtr0310448 8623506|8623506|8623506|8623506|8623506 8625203|8625203|8625203|8624135|8625203 2R + 8623963 8624009 3'utr Cirl FlyBase G13989.1 AAGATCTAGGAACTGTATGTACATGATATATAGAATTCAGGCGAATT 25 8623980 0.699055662 6 23 167 0.928571429 1.414973348 0.107142857 0.12 0.214285714 25 2 0 26 2R:8623963-8624009 6 Cirl FBtr0305081|FBtr0301363|FBtr0310448|FBtr0290112|FBtr0305082 8623506|8623506|8623506|8623506|8623506 8625203|8624135|8625203|8625203|8625203 TGATAT 6mer3-8 dme-miR-283-5p 2R + 8623955 8624010 3'utr Cirl FlyBase G10645.1 ATATGTATAAGATCTAGGAACTGTATGTACATGATATATAGAATTCAGGCGAATTA 26 8623980 0.946348872 7 26 166 1 1.62324929 0.023809524 0.384615385 0.619047619 26 0 0 42 2R:8623955-8624010 6 23 2140 FBgn0033313 1194.753333 23.36 35.54 0.019250836 0.984589041 0.647158132 6 6 6 0.01 dme-miR-276a-3p 7mer-m8 AGTTCCT 2R 8664347 8664353 + 2R_8664347_8664353_+ 0.631524679 0.631524679 0.631524679 0 ptc FBtr0089427 8664335 8665223 2R + 8664303 8664392 stop_codon ptc FlyBase G14009.1 CAGGGCGGTGCGCAGCTATAACTTTACGAGTTAGCACTAGCACTAGTTCCTGTAGCTATTAGGACGTATCTTTAGACTCTAGCCTAAGCC 21 8664346 0.944785391 8 19 150 0.913043478 1.021189299 0.217391304 0.095238095 0.173913043 21 1 1 21 2R:8664303-8664392 7 ptc FBtr0089427 8664335 8665223 AGTTCCT 7mer-m8 dme-miR-276a-3p 2R + 8664334 8664385 stop_codon ptc FlyBase G10662.1 TAGCACTAGCACTAGTTCCTGTAGCTATTAGGACGTATCTTTAGACTCTAGC 10 8664346 0.955614806 6 10 78 1 1.301029996 0.05 0.6 0.8 10 0 0 20 2R:8664334-8664385 7 11 2141 FBgn0003892 243 5.353333333 8.3 0.04526749 2.054794521 1.325301205 1 1 1 0.01 dme-miR-252-5p 7mer-m8 GTACTTA 2R 8664859 8664865 + 2R_8664859_8664865_+ 0.588299917 0.588299917 0.588299917 0 ptc FBtr0089427 8664335 8665223 2R + 8664831 8664872 3'utr ptc FlyBase G14011.1 ATTGTAACACACGCAAAACACACACAATGTACTTACATATAA 27 8664858 0.96645889 3 23 117 0.882352941 1.176091259 0 0.185185185 0.352941176 27 3 1 30 2R:8664831-8664872 7 ptc FBtr0089427 8664335 8665223 GTACTTA 7mer-m8 dme-miR-252-5p 2R + 8664811 8664872 3'utr ptc FlyBase G10663.1 ACTTAAACTTAGAGATATTTATTGTAACACACGCAAAACACACACAATGTACTTACATATAA 18 8664858 0.965700495 3 18 87 1 1.477121255 0 0.5 0.7 18 0 0 30 2R:8664811-8664872 7 21 2142 FBgn0003892 243 5.353333333 8.3 0.086419753 3.922789539 2.530120482 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 8664971 8664976 + 2R_8664971_8664976_+ 1 0.999434309 0.999717155 0.00040001 ptc FBtr0089427 8664335 8665223 2R + 8664946 8664989 3'utr ptc FlyBase G14012.1 ATGTACATAAAACACAAGGACTTGAACCAAAATAGTATCGCTTA 26 8664978 0.842737215 3 22 125 0.862068966 0.795880017 0.068965517 0.115384615 0.206896552 26 1 3 25 2R:8664946-8664989 6 ptc FBtr0089427 8664335 8665223 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 8664954 8664990 3'utr ptc FlyBase G10665.1 AAAACACAAGGACTTGAACCAAAATAGTATCGCTTAA 9 8664978 0.942361114 3 9 40 1 1.079181246 0.083333333 0.222222222 0.416666667 9 0 0 12 2R:8664954-8664990 6 16.5 2143 FBgn0003892 243 5.353333333 8.3 0.067901235 3.082191781 1.987951807 -7 -7 -7 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2R 8682571 8682576 + 2R_8682571_8682576_+ 1 1 1 0 Acsl FBtr0088700|FBtr0100430|FBtr0088699|FBtr0100428|FBtr0100431|FBtr0100427|FBtr0100429|FBtr0100426 8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604 8682791|8682791|8682791|8682791|8682791|8683022|8682791|8682791 2R + 8682532 8682608 3'utr Acsl FlyBase G14038.1 ACGTAAAGAGAAAAGTCAAAATTAATATGCAACAAATGAAAGACTTAGTACCAAAATATAATAAAAACACTGAAATC 20 8682568 0.942696423 6 19 80 0.952380952 1.301029996 0 0.05 0.095238095 20 1 0 20 2R:8682532-8682608 6 Acsl FBtr0100428|FBtr0100427|FBtr0100431|FBtr0100426|FBtr0100429|FBtr0088700|FBtr0100430|FBtr0088699 8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604 8682791|8683022|8682791|8682791|8682791|8682791|8682791|8682791 AAGACT 6mer3-8 dme-miR-14-3p 2R + 8682538 8682589 3'utr Acsl FlyBase G10685.1 AGAGAAAAGTCAAAATTAATATGCAACAAATGAAAGACTTAGTACCAAAATA 7 8682568 0.989847246 2 6 29 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 2R:8682538-8682589 6 9.5 2144 FBgn0263120 3324.373333 107.4633333 164.07 0.002857681 0.088402246 0.057902115 3 3 3 0.01 dme-miR-283-5p 6mer2-7 GATATT 2R 8718040 8718045 - 2R_8718040_8718045_- 0.999999315 1 0.999999657 4.95E-07 CG14767 FBtr0088719|FBtr0088720|FBtr0088718 8718015|8718015|8718015 8718693|8718693|8718693 2R - 8718021 8718126 3'utr CG14767 FlyBase G21051.1 AATTATGATGATATTACCAGCAACAGTAAAGTTTTATGTGTGTACAATATCTAAATGTATACTGTGTACTAAATATGCAAAGATATTCGAATAAAAATTAGTTTAT 18 8718063 0.981216166 12 16 131 0.888888889 1.204119983 0.111111111 0 0 18 2 0 16 2R:8718021-8718126 6 CG14767 FBtr0088718|FBtr0088720|FBtr0088719 8718015|8718015|8718015 8718693|8718693|8718693 GATATT 6mer2-7 dme-miR-283-5p 2R - 8718028 8718074 3'utr CG14767 FlyBase G15957.1 AAATGTATACTGTGTACTAAATATGCAAAGATATTCGAATAAAAATT 9 8718061 0.988122105 7 8 67 0.857142857 1.079181246 0.142857143 0.555555556 0.714285714 9 2 0 12 2R:8718028-8718074 6 4 2145 FBgn0040777 1544.016667 90.17333333 137.3633333 0.002590646 0.044359012 0.029119852 18 16 17 0.01 dme-miR-11-3p 7mer-m1 TGTGATG 2R 8718382 8718388 - 2R_8718382_8718388_- 0.612071121 0.612071121 0.612071121 0 CG14767 FBtr0088719|FBtr0088720|FBtr0088718 8718015|8718015|8718015 8718693|8718693|8718693 2R - 8718357 8718411 3'utr CG14767 FlyBase G21054.1 AAGCATTAAAGCCAAAAACATATTGTGATGCTGGCGAGGAAAGCATCAATTCCTT 27 8718389 0.962657695 7 26 131 0.96969697 1.204119983 0 0.185185185 0.333333333 27 0 1 32 2R:8718357-8718411 7 CG14767 FBtr0088718|FBtr0088720|FBtr0088719 8718015|8718015|8718015 8718693|8718693|8718693 TGTGATG 7mer-m1 dme-miR-11-3p 2R - 8718314 8718403 3'utr CG14767 FlyBase G15959.1 AAGCCAAAAACATATTGTGATGCTGGCGAGGAAAGCATCAATTCCTTTTCGGCCGCATCTGACCCGATTTTAGCTGCAACAATCTGTTAG 18 8718389 0.969018511 8 18 100 1 1.380211242 0 0.277777778 0.458333333 18 0 0 24 2R:8718314-8718403 7 17.5 2146 FBgn0040777 1544.016667 90.17333333 137.3633333 0.011334075 0.194070679 0.127399355 1 1 1 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2R 8718433 8718438 - 2R_8718433_8718438_- 0.946879657 0.999997579 0.973438618 0.037560027 CG14767 FBtr0088719|FBtr0088720|FBtr0088718 8718015|8718015|8718015 8718693|8718693|8718693 2R - 8718425 8718495 3'utr CG14767 FlyBase G21055.1 CAAGTTTTCGCTATTAGCCATCGCTCATTATTGTTGTTTAACGTACAACTAAGACGCTCTAGTTGCTGCTA 19 8718465 0.784861119 8 19 153 1 1.361727836 0.086956522 0.105263158 0.260869565 19 0 0 23 2R:8718425-8718495 6 CG14767 FBtr0088718|FBtr0088720|FBtr0088719 8718015|8718015|8718015 8718693|8718693|8718693 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2R - 8718422 8718492 3'utr CG14767 FlyBase G15960.1 GTTTTCGCTATTAGCCATCGCTCATTATTGTTGTTTAACGTACAACTAAGACGCTCTAGTTGCTGCTAATT 13 8718435 0.809437858 7 11 96 0.833333333 1.176091259 0.277777778 0.230769231 0.444444444 13 3 0 15 2R:8718422-8718492 6 1 2147 FBgn0040777 1544.016667 90.17333333 137.3633333 0.000647661 0.011089753 0.007279963 27 -3 12 0.01 dme-miR-305-5p 6mer2-7 GTACAA 2R 8718448 8718453 - 2R_8718448_8718453_- 0.999967188 0.998615786 0.999291487 0.000955584 CG14767 FBtr0088719|FBtr0088720|FBtr0088718 8718015|8718015|8718015 8718693|8718693|8718693 2R - 8718425 8718495 3'utr CG14767 FlyBase G21055.1 CAAGTTTTCGCTATTAGCCATCGCTCATTATTGTTGTTTAACGTACAACTAAGACGCTCTAGTTGCTGCTA 19 8718465 0.784861119 8 19 153 1 1.361727836 0.086956522 0.105263158 0.260869565 19 0 0 23 2R:8718425-8718495 6 CG14767 FBtr0088718|FBtr0088720|FBtr0088719 8718015|8718015|8718015 8718693|8718693|8718693 GTACAA 6mer2-7 dme-miR-305-5p 2R - 8718422 8718492 3'utr CG14767 FlyBase G15960.1 GTTTTCGCTATTAGCCATCGCTCATTATTGTTGTTTAACGTACAACTAAGACGCTCTAGTTGCTGCTAATT 13 8718435 0.809437858 7 11 96 0.833333333 1.176091259 0.277777778 0.230769231 0.444444444 13 3 0 15 2R:8718422-8718492 6 5 2148 FBgn0040777 1544.016667 90.17333333 137.3633333 0.003238307 0.055448765 0.036399816 12 -18 -3 0.01 dme-miR-980-3p 7mer-A1 GCAGCTA 2R 8718575 8718581 - 2R_8718575_8718581_- 0.823349562 0.823349562 0.823349562 0 CG14767 FBtr0088719|FBtr0088720|FBtr0088718 8718015|8718015|8718015 8718693|8718693|8718693 2R - 8718504 8718839 stop_codon CG14767 FlyBase G21056.1 TTGATGTAATCGGTGGCATTCCGCCTCCTCCGCCCTACAACGACGTTGCCGATGCCCAGGTGCAAGTGCCATCGCAATCGCCGCTGCATCGCCAGCCAAACATCCCGGGACAAGTATTCGGCGGACGCGACGAAAGCCAGGCTTAAACAGTACTTTCGACTGGATTGCTTCTCATGGCGAGTGGGTTGTGATCAGCGGTGACCACCCCTCTCCCATCCTCTTCTTGCCCAGATGATCTGGTTTCTGGTCCCTCATTTCGCAGCTATCATTCCCAGGCACACATACACCTTCTTAATGGTTGCTTCAATGTATTGAACACTGTTTTTAGAAAAACGA 272 8718598 0.999953233 54 254 2070 0.943396226 2 0.257861635 0.139705882 0.264150943 272 16 2 300 2R:8718504-8718839 7 CG14767 FBtr0088718|FBtr0088720|FBtr0088719 8718015|8718015|8718015 8718693|8718693|8718693 GCAGCTA 7mer-A1 dme-miR-980-3p 2R - 8718535 8718695 stop_codon CG14767 FlyBase G15961.1 AAACAGTACTTTCGACTGGATTGCTTCTCATGGCGAGTGGGTTGTGATCAGCGGTGACCACCCCTCTCCCATCCTCTTCTTGCCCAGATGATCTGGTTTCTGGTCCCTCATTTCGCAGCTATCATTCCCAGGCACACATACACCTTCTTAATGGTTGCTTC 149 8718598 0.984723318 28 135 1184 0.92173913 1.72427587 0.256521739 0.375838926 0.595652174 149 15 3 212 2R:8718535-8718695 7 48 2149 FBgn0040777 1544.016667 90.17333333 137.3633333 0.031087747 0.532308147 0.34943823 17 17 17 0.01 dme-miR-252-5p 6mer3-8 GTACTT 2R 8729550 8729555 - 2R_8729550_8729555_- 1 1 1 0 stmA FBtr0339341|FBtr0088715|FBtr0088716|FBtr0301639 8729500|8729500|8729500|8729500 8729726|8729726|8729726|8729726 2R - 8729539 8729575 3'utr stmA FlyBase G21064.1 TGTTAAACGACCCCGAATATGTACTTTGATTTAATTG 9 8729556 0.978764051 5 9 61 1 1.079181246 0 0.222222222 0.416666667 9 0 0 12 2R:8729539-8729575 6 stmA FBtr0339341|FBtr0088715|FBtr0088716|FBtr0301639 8729500|8729500|8729500|8729500 8729726|8729726|8729726|8729726 GTACTT 6mer3-8 dme-miR-252-5p 2R - 8729532 8729571 3'utr stmA FlyBase G15970.1 AAACGACCCCGAATATGTACTTTGATTTAATTGTTAGACA 11 8729557 0.977096948 5 10 72 0.933333333 1.146128036 0.066666667 0.181818182 0.4 11 1 0 14 2R:8729532-8729571 6 10 2150 FBgn0086784 383.3333333 16.82 25.63666667 0.026086957 0.594530321 0.390066311 1 2 1.5 0.01 dme-miR-1006-3p 7mer-m8 CGAATTT 2R 8729644 8729650 - 2R_8729644_8729650_- 0.661614704 0.661614704 0.661614704 0 stmA FBtr0339341|FBtr0088715|FBtr0088716|FBtr0301639 8729500|8729500|8729500|8729500 8729726|8729726|8729726|8729726 2R - 8729609 8729663 3'utr stmA FlyBase G21065.1 ATAGCTGAGAAAGCGAATTTGTTTGGTGTCTGTATGGAACTAGGTAAATCTTATT 18 8729633 0.989372297 7 17 171 1 1.301029996 0.3 0.111111111 0.2 18 0 0 20 2R:8729609-8729663 7 stmA FBtr0339341|FBtr0088715|FBtr0088716|FBtr0301639 8729500|8729500|8729500|8729500 8729726|8729726|8729726|8729726 CGAATTT 7mer-m8 dme-miR-1006-3p 2R - 8729611 8729673 3'utr stmA FlyBase G15971.1 ATGTATATCTATAGCTGAGAAAGCGAATTTGTTTGGTGTCTGTATGGAACTAGGTAAATCTTA 19 8729634 0.614548802 9 18 168 0.961538462 1.096910013 0.346153846 0.368421053 0.538461538 19 0 1 25 2R:8729611-8729673 7 10 2151 FBgn0086784 383.3333333 16.82 25.63666667 0.026086957 0.594530321 0.390066311 -17 -16 -16.5 0.01 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 8888480 8888486 - 2R_8888480_8888486_- 0.823349562 0.823349562 0.823349562 0 CG8272 FBtr0088686|FBtr0330246 8888402|8888402 8889036|8888973 2R - 8888433 8888532 3'utr CG8272 FlyBase G21079.1 AACACATTGTGGTTATAATTACAACAAGTCACTGTCACTTCTTATAAGCTTTATACGATTAAATCGTTAACTGAACTCAACTGACTTAAGTGGTTAATGT 43 8888488 0.989829548 8 40 394 0.9 1.653212514 0.02 0.139534884 0.26 43 5 0 45 2R:8888433-8888532 7 CG8272 FBtr0088686|FBtr0330246 8888402|8888402 8889036|8888973 AGCTTTA 7mer-A1 dme-miR-79-3p 2R - 8888434 8888514 3'utr CG8272 FlyBase G15981.1 TTACAACAAGTCACTGTCACTTCTTATAAGCTTTATACGATTAAATCGTTAACTGAACTCAACTGACTTAAGTGGTTAATG 23 8888488 0.974498895 8 22 194 0.966666667 1.462397998 0.033333333 0.260869565 0.433333333 23 1 0 29 2R:8888434-8888514 7 23 2152 FBgn0033337 113.6666667 4.916666667 7.516666667 0.202346041 4.677966102 3.059866962 2 2 2 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2R 8888664 8888669 - 2R_8888664_8888669_- 0.730949445 0.730949445 0.730949445 0 CG8272 FBtr0088686|FBtr0088686|FBtr0088686|FBtr0330246|FBtr0330246|FBtr0330246 8888402|8888402|8888402|8888402|8888402|8888402 8889036|8889036|8889036|8888973|8888973|8888973 2R - 8888634 8888681 3'utr CG8272 FlyBase G21080.1 GATTGTAAATTATGTGATCGGTTGCCAAAATTAAAGTTGTTTGTTTGA 7 8888671 0.990116859 5 6 62 0.7 0.84509804 0.4 0.285714286 0.5 7 3 0 7 2R:8888634-8888681 6 CG8272 FBtr0088686|FBtr0088686|FBtr0088686|FBtr0330246|FBtr0330246|FBtr0330246 8888402|8888402|8888402|8888402|8888402|8888402 8889036|8889036|8889036|8888973|8888973|8888973 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 8888635 8888685 3'utr CG8272 FlyBase G15982.1 ACACGATTGTAAATTATGTGATCGGTTGCCAAAATTAAAGTTGTTTGTTTG 9 8888659 0.882667273 3 9 76 1 1.113943352 0.384615385 0.444444444 0.615384615 9 0 0 13 2R:8888635-8888685 6 8 2153 FBgn0033337 113.6666667 4.916666667 7.516666667 0.070381232 1.627118644 1.064301552 2 -10 -4 0.01 dme-miR-308-3p 8mer-m1 CTGTGATT 2R 8888717 8888724 - 2R_8888717_8888724_- 0.385560641 0.385560641 0.385560641 0 CG8272 FBtr0088686|FBtr0330246 8888402|8888402 8889036|8888973 2R - 8888683 8888747 3'utr CG8272 FlyBase G21081.1 ACGTAACGTTTGTCCGCATTCAACTGTGATTTTTTGTAAGGTACGAATCGTATGATAAGTGTACA 21 8888716 0.991413066 7 20 214 0.964285714 1.431363764 0.214285714 0.19047619 0.392857143 21 1 0 27 2R:8888683-8888747 8 CG8272 FBtr0088686|FBtr0330246 8888402|8888402 8889036|8888973 CTGTGATT 8mer-m1 dme-miR-308-3p 2R - 8888706 8888745 3'utr CG8272 FlyBase G15983.1 GTAACGTTTGTCCGCATTCAACTGTGATTTTTTGTAAGGT 13 8888716 0.596723692 6 12 139 0.823529412 1.146128036 0.529411765 0.153846154 0.352941176 13 3 0 14 2R:8888706-8888745 8 17 2154 FBgn0033337 113.6666667 4.916666667 7.516666667 0.149560117 3.457627119 2.261640798 -8 -8 -8 0.01 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 8888883 8888889 - 2R_8888883_8888889_- 0.82334956 0.82334934 0.82334945 2.12E-07 CG8272 FBtr0088686|FBtr0330246 8888402|8888402 8889036|8888973 2R - 8888835 8888920 3'utr CG8272 FlyBase G21082.1 CGGCCCCCAGCAGCTGGGCTATAGTTGTGAAAGCTTTAGTCAAATATACATACATATACATATATATGCAGACATATATGTATTTG 34 8888896 0.974902213 7 33 272 0.925 1.568201724 0.175 0.147058824 0.275 34 3 0 37 2R:8888835-8888920 7 CG8272 FBtr0088686|FBtr0330246 8888402|8888402 8889036|8888973 AGCTTTA 7mer-A1 dme-miR-79-3p 2R - 8888873 8888911 3'utr CG8272 FlyBase G15984.2 GCAGCTGGGCTATAGTTGTGAAAGCTTTAGTCAAATATA 17 8888886 0.715333809 6 16 126 0.892857143 0.795880017 0.142857143 0.470588235 0.678571429 17 0 3 25 2R:8888873-8888911 7 22 2155 FBgn0033337 113.6666667 4.916666667 7.516666667 0.193548387 4.474576271 2.926829268 7 -3 2 0.01 dme-miR-970-3p 6mer3-8 TCTTAT 2R 8898620 8898625 + 2R_8898620_8898625_+ 1 1 1 0 Sec31 FBtr0088643|FBtr0345224|FBtr0339302|FBtr0088642 8898576|8898576|8898576|8898576 8898798|8898798|8898798|8898798 2R + 8898561 8898654 stop_codon Sec31 FlyBase G14093.1 AGTTGGTTCTGCGTTAGAGCCCCGTCGCCGGATCGCAGCCAAGTTCACTAAACGTATATTCTTATTGTGTCTTCAGATATCGATGTCAAACACA 12 8898604 0.964490998 7 12 66 1 1.176091259 0.333333333 0.25 0.4 12 0 0 15 2R:8898561-8898654 6 Sec31 FBtr0088642|FBtr0339302|FBtr0345224|FBtr0088643 8898576|8898576|8898576|8898576 8898798|8898798|8898798|8898798 TCTTAT 6mer3-8 dme-miR-970-3p 2R + 8898577 8898657 3'utr Sec31 FlyBase G10729.1 GAGCCCCGTCGCCGGATCGCAGCCAAGTTCACTAAACGTATATTCTTATTGTGTCTTCAGATATCGATGTCAAACACAAAA 11 8898619 0.985314224 6 10 84 0.882352941 1.176091259 0.117647059 0.363636364 0.588235294 11 2 0 15 2R:8898577-8898657 6 4.5 2156 FBgn0033339 1910.493333 56.05666667 85.60333333 0.002355413 0.080275911 0.052568046 16 1 8.5 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 2R 8902618 8902623 + 2R_8902618_8902623_+ 1 1 1 0 Ggamma1 FBtr0088645|FBtr0088647|FBtr0088646 8902559|8902559|8902559 8904791|8903130|8903130 2R + 8902559 8902708 stop_codon Ggamma1 FlyBase G14098.1 AAGGAGGCGGTGAGGATGGTCCGCCGTTGCCGAGGAGTCAGCGATCGCCGGCGGACGTTTAGCTTATTTTTAGTTTAGCAAGATGGATTAGGACGCAAACGTGTGTGGAGTACTACCCCAGTACCAGTATCAACGCCACCTGGAACAATA 38 8902643 0.854266942 17 35 211 0.958333333 1.662757832 0.291666667 0.157894737 0.333333333 38 2 0 46 2R:8902559-8902708 6 Ggamma1 FBtr0088646|FBtr0088647|FBtr0088645 8902559|8902559|8902559 8903130|8903130|8904791 TAGCTT 6mer3-8 dme-miR-79-3p 2R + 8902523 8902685 stop_codon Ggamma1 FlyBase G10733.1 ATCCCTTCCGCGAGAAGTCGTCCTGCACCGTTCTCTAAGGAGGCGGTGAGGATGGTCCGCCGTTGCCGAGGAGTCAGCGATCGCCGGCGGACGTTTAGCTTATTTTTAGTTTAGCAAGATGGATTAGGACGCAAACGTGTGTGGAGTACTACCCCAGTACCAG 23 8902644 0.969230001 14 21 118 0.825 0.740362689 0.225 0.391304348 0.65 23 2 5 33 2R:8902523-8902685 6 7.5 2157 FBgn0004921 4069.183333 548.5766667 837.3966667 0.001843122 0.013671744 0.008956329 -25 -26 -25.5 0.01 dme-miR-1012-3p 6mer2-7 TGACTA 2R 8903015 8903020 + 2R_8903015_8903020_+ 1 1 1 0 Ggamma1 FBtr0088645|FBtr0088647|FBtr0088646 8902559|8902559|8902559 8904791|8903130|8903130 2R + 8902868 8903105 3'utr Ggamma1 FlyBase G14099.1 CAGAAACACAAACTCAATGTCAAACCTAAATCTATATCTAAATCTAAATCGAAGCATTTGTTCCAAAGATATCAGAGTTGTTTCCTTTCCGATGAGTAACGCAGTTAATGTACACGAATATCCCAACTATAACGACAATTAATGCGCTGACTATAGCACCTACTACTCTACCTAACCCGAAATTCTATATATACAAAACTATCAACTTAATCCGACATACAAATTTATCAATAAACGC 119 8903006 0.971490904 25 116 685 0.971428571 2.133538908 0.007142857 0.151260504 0.278571429 119 4 0 136 2R:8902868-8903105 6 Ggamma1 FBtr0088646|FBtr0088647|FBtr0088645 8902559|8902559|8902559 8903130|8903130|8904791 TGACTA 6mer2-7 dme-miR-1012-3p 2R + 8902977 8903051 3'utr Ggamma1 FlyBase G10737.1 GTACACGAATATCCCAACTATAACGACAATTAATGCGCTGACTATAGCACCTACTACTCTACCTAACCCGAAATT 40 8903006 0.975490268 12 37 225 0.952380952 1.477121255 0.126984127 0.35 0.587301587 40 2 1 60 2R:8902977-8903051 6 55.5 2158 FBgn0004921 4069.183333 548.5766667 837.3966667 0.0136391 0.101170909 0.066276834 9 9 9 0.01 dme-miR-2b-2-5p 6mer2-7 TGAAGA 2R 8917772 8917777 + 2R_8917772_8917777_+ 0.999999998 1 0.999999999 0 lin FBtr0088651 8917676 8918234 2R + 8917743 8917912 3'utr lin FlyBase G14117.1 GGAATAGGAGAAACTAGCGCAAAATTCGATGAAGATGGAGGCCTTGTAGAATACGTGTATTAGCCGTAGGGACCAACCACTCCGACCATAACTCCGCACCCCGATCCAGTAGCGCGTCAACCGTAGTTAAGATCTTGCACCCTCTTCATCCGCTTCGCCCAGCAGGTCTT 34 8917778 0.965411869 16 33 165 0.973684211 1.267171728 0.131578947 0.117647059 0.210526316 34 0 1 37 2R:8917743-8917912 6 lin FBtr0088651 8917676 8918234 TGAAGA 6mer2-7 dme-miR-2b-2-5p 2R + 8917742 8917840 3'utr lin FlyBase G10749.1 TGGAATAGGAGAAACTAGCGCAAAATTCGATGAAGATGGAGGCCTTGTAGAATACGTGTATTAGCCGTAGGGACCAACCACTCCGACCATAACTCCGCA 20 8917778 0.932843332 9 20 73 1 1.531478917 0.323529412 0.5 0.705882353 20 0 0 34 2R:8917742-8917840 6 16.5 2159 FBgn0002552 347.3366667 11.45666667 17.51666667 0.047504343 1.440209485 0.941960038 -6 -6 -6 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT 2R 8917932 8917937 + 2R_8917932_8917937_+ 1 1 1 0 lin FBtr0088651 8917676 8918234 2R + 8917920 8917962 3'utr lin FlyBase G14118.1 AGATACATACCCAGCTGTATGTAATTGTCATTGTAATTGTAAT 7 8917945 0.987816192 5 6 54 0.888888889 0.602059991 0 0.142857143 0.333333333 7 0 1 8 2R:8917920-8917962 6 lin FBtr0088651 8917676 8918234 AGCTGT 6mer3-8 dme-miR-1008-3p 2R + 8917919 8917970 3'utr lin FlyBase G10750.1 CAGATACATACCCAGCTGTATGTAATTGTCATTGTAATTGTAATGAGCATCA 6 8917944 0.982332006 4 6 47 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 2R:8917919-8917970 6 3.5 2160 FBgn0002552 347.3366667 11.45666667 17.51666667 0.010076679 0.305498982 0.199809705 -13 -12 -12.5 0.01 dme-miR-965-3p 8mer-A1 TACGCTTA 2R 8944614 8944621 - 2R_8944614_8944621_- 0.625364919 0.625364919 0.625364919 0 CG8230 FBtr0088674 8944296 8944905 2R - 8944603 8944634 3'utr CG8230 FlyBase G21138.1 ACATAGACATAGCTACGCTTATACTAATGTGT 8 8944620 0.681315505 4 8 45 1 0.903089987 0 0 0 8 0 0 8 2R:8944603-8944634 8 CG8230 FBtr0088674 8944296 8944905 TACGCTTA 8mer-A1 dme-miR-965-3p 2R - 8944598 8944634 3'utr CG8230 FlyBase G16024.1 ACATAGACATAGCTACGCTTATACTAATGTGTATGTT 6 8944620 0.740289837 4 6 44 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 2R:8944598-8944634 8 7 2161 FBgn0027607 600.88 26.23666667 40.29 0.011649581 0.266802185 0.173740382 -1 -1 -1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 8948437 8948443 - 2R_8948437_8948443_- 0.801970437 0.801970437 0.801970437 0 CG33199 FBtr0307344|FBtr0307344|FBtr0307344|FBtr0088688|FBtr0088688|FBtr0088688 8947679|8947679|8947679|8948111|8948111|8948111 8948752|8948752|8948752|8948752|8948752|8948752 2R - 8948365 8948623 3'utr CG33199 FlyBase G21151.1 TTGCCTAAGTTAAGTCACCCACTCACCACAGACCCAAGCGGAACTCGGACATGGAGGCTTGTTTTGTAATATTCTGTTCGATAAACTAACTGATCGGAGGCGAGGATCTGTGCGCATATATAGATATATTTTCTTGTTTACACATGCACACCATGCGTCGCCAACTAAAAGGAATAAATTTGTGATAAATCGTGTATGAAAAAAGCCCATCGGCAGACAAACTGAACGAAGGAGCGATGGAGGAGAAGATTCGCTGAGC 327 8948445 0.974889446 26 311 1938 0.957178841 1.625541087 0.173803526 0.171253823 0.317380353 327 9 8 380 2R:8948365-8948623 7 CG33199 FBtr0088688|FBtr0088688|FBtr0088688|FBtr0307344|FBtr0307344|FBtr0307344 8948111|8948111|8948111|8947679|8947679|8947679 8948752|8948752|8948752|8948752|8948752|8948752 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 8948357 8948594 3'utr CG33199 FlyBase G16033.1 AGACCCAAGCGGAACTCGGACATGGAGGCTTGTTTTGTAATATTCTGTTCGATAAACTAACTGATCGGAGGCGAGGATCTGTGCGCATATATAGATATATTTTCTTGTTTACACATGCACACCATGCGTCGCCAACTAAAAGGAATAAATTTGTGATAAATCGTGTATGAAAAAAGCCCATCGGCAGACAAACTGAACGAAGGAGCGATGGAGGAGAAGATTCGCTGAGCTTGCGGGA 273 8948445 0.999965586 23 265 1650 0.973614776 2.089905111 0.232189974 0.32967033 0.517150396 273 8 2 369 2R:8948357-8948594 7 228 2162 FBgn0053199 249.6866667 28.21 43.29 0.913144474 8.08224034 5.266805267 2 2 2 0.01 dme-miR-33-5p 6mer3-8 CAATGC 2R 8960665 8960670 + 2R_8960665_8960670_+ 0.999986728 1 0.999993364 9.40E-06 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 2R + 8960494 8960878 3'utr babo FlyBase G14180.1 ACGCCCCGTGGGATCGGGGGCAGACAAATAGTAGTAACCTGTAACCTGGCCCCGCGTTACCTTAAATGTCCTGGCAGCGCTTGCGAAGCAGTTCCAGAATCCAGAAACCCGTTAAGAAATTAAATACAAAGAAGTTGTAAATATTATGTGCTAACTCATCCTTAAAGTTTCCAATGCTTTGCTTTGTTTCCGTTCAGAACGAGCTCGTTATAAGTTTTGTGTTACACCATCCTCAACTATTGTACATAACCTTCGTTGACATTTTCGCTGAGATTTGCTTGTTTCCGGGCGGAGTGATCAAGGCGGCGCGCCACAAAAAAACTGCCGCACTGCCATTAGAGCTACCAATTAGGGCCTAGTTATATACCAACAAAATAACACATTA 160 8960681 0.985944887 37 155 1277 0.966292135 1.758407192 0.196629213 0.09375 0.185393258 160 4 2 172 2R:8960494-8960878 6 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 CAATGC 6mer3-8 dme-miR-33-5p 2R + 8960643 8960709 3'utr babo FlyBase G10786.1 GCTAACTCATCCTTAAAGTTTCCAATGCTTTGCTTTGTTTCCGTTCAGAACGAGCTCGTTATAAGTT 35 8960681 0.990142769 6 34 339 0.979166667 1.672097858 0.166666667 0.228571429 0.4375 35 1 0 47 2R:8960643-8960709 6 38 2163 FBgn0011300 981.73 24.67666667 37.73 0.03870718 1.53991625 1.007156109 -16 -16 -16 0.01 dme-miR-14-3p 8mer-A1 AAGACTGA 2R 8960983 8960990 + 2R_8960983_8960990_+ 0.643565469 0.643565469 0.643565469 0 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 2R + 8960954 8961011 3'utr babo FlyBase G14181.1 TAACGAAAACAAAACAGTAAGACTATGTCAAGACTGAGCAGCAGTGGAAAGCAGTGAG 85 8960980 0.960788884 6 66 330 0.777777778 1.886490725 0.515151515 0.152941176 0.272727273 85 22 0 77 2R:8960954-8961011 8 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 AAGACTGA 8mer-A1 dme-miR-14-3p 2R + 8960958 8961007 3'utr babo FlyBase G10788.1 GAAAACAAAACAGTAAGACTATGTCAAGACTGAGCAGCAGTGGAAAGCAG 55 8960980 0.898445185 5 41 207 0.7625 1.30820858 0.6375 0.345454545 0.55 55 17 2 61 2R:8960958-8961007 8 64.5 2164 FBgn0011300 981.73 24.67666667 37.73 0.065700345 2.613805214 1.709514975 3 3 3 0.01 dme-miR-305-3p 6mer2-7 TGTGCC 2R 8961243 8961248 + 2R_8961243_8961248_+ 0.991188057 0.999857933 0.995522995 0.006130474 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 2R + 8961181 8961281 3'utr babo FlyBase G14182.1 ACGATTTGGCGCGCCGCCTGCTCACGAACAGCTTGCCATGCCCACGTCGCTATTGCTGCTGCTGTGCCTCTAAAACTTAATGAACACCACCCCTCTCCCAT 38 8961242 0.787956745 14 30 224 0.854166667 1.612783857 0.270833333 0.236842105 0.395833333 38 7 0 41 2R:8961181-8961281 6 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 TGTGCC 6mer2-7 dme-miR-305-3p 2R + 8961145 8961263 3'utr babo FlyBase G10789.1 AAATCGTAACGTAAAAAATAAAATGAAAGGAATCAAACGATTTGGCGCGCCGCCTGCTCACGAACAGCTTGCCATGCCCACGTCGCTATTGCTGCTGCTGTGCCTCTAAAACTTAATGA 25 8961243 0.976870605 12 24 156 0.96875 1.491361694 0.28125 0.28 0.4375 25 1 0 31 2R:8961145-8961263 6 17.5 2165 FBgn0011300 981.73 24.67666667 37.73 0.017825675 0.709171957 0.463821892 1 0 0.5 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 2R 8962020 8962025 + 2R_8962020_8962025_+ 1 1 1 0 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 2R + 8962011 8962061 3'utr babo FlyBase G14187.1 CTTTACTGAAGTTAATCACATCCTGTACGAACACAATCGATTTCTTTGGAA 11 8962033 0.637976439 6 11 63 1 1.146128036 0.285714286 0.181818182 0.357142857 11 0 0 14 2R:8962011-8962061 6 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 AGTTAA 6mer3-8 dme-miR-999-3p 2R + 8961998 8962059 3'utr babo FlyBase G10793.1 AATTTAATTTAAGCTTTACTGAAGTTAATCACATCCTGTACGAACACAATCGATTTCTTTGG 11 8962049 0.968914314 6 11 67 1 1.255272505 0.611111111 0.363636364 0.611111111 11 0 0 18 2R:8961998-8962059 6 4 2166 FBgn0011300 981.73 24.67666667 37.73 0.00407444 0.162096447 0.106016433 -13 -29 -21 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2R 8962265 8962270 + 2R_8962265_8962270_+ 1 1 1 0 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 2R + 8962241 8962287 3'utr babo FlyBase G14189.1 AAGTTTAAGCCGAAAGTTGTTCTTAAGACTAACCCCCAATACAACCT 29 8962263 0.734127703 2 27 174 0.939393939 1.190331698 0.090909091 0.103448276 0.212121212 29 1 1 31 2R:8962241-8962287 6 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 AAGACT 6mer3-8 dme-miR-14-3p 2R + 8962241 8962289 3'utr babo FlyBase G10796.1 AAGTTTAAGCCGAAAGTTGTTCTTAAGACTAACCCCCAATACAACCTCC 13 8962263 0.735021929 2 13 86 1 1.301029996 0.05 0.384615385 0.6 13 0 0 20 2R:8962241-8962289 6 20 2167 FBgn0011300 981.73 24.67666667 37.73 0.0203722 0.810482237 0.530082163 2 2 2 0.01 dme-miR-92b-3p 6mer2-7 TGCAAT 2R 8962596 8962601 + 2R_8962596_8962601_+ 1 0.999976253 0.999988127 1.68E-05 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 2R + 8962560 8962749 3'utr babo FlyBase G14191.1 AAGTGTCTCAGCCATAAAGTTAGGGACGAAAGCATTTGCAATGTGTATTATTCGTGAATGGATTGGATCATGAGAGATATATAGAATGTCAGAGAGTTGAAGAACGAAAGGAGGAATGATTTACTTGGGTGTAATGTTAAAAACAAAAGCGTTGAAAGTGTAAACAGAGTCTAACTTTTAGCTTTAAGCT 23 8962609 0.982070945 13 23 165 1 1.414973348 0.230769231 0.130434783 0.230769231 23 0 0 26 2R:8962560-8962749 6 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 TGCAAT 6mer2-7 dme-miR-92b-3p 2R + 8962589 8962651 3'utr babo FlyBase G10797.1 AAGCATTTGCAATGTGTATTATTCGTGAATGGATTGGATCATGAGAGATATATAGAATGTCAG 7 8962618 0.983508741 6 6 43 0.8 0.903089987 0.4 0.428571429 0.6 7 2 0 8 2R:8962589-8962651 6 2 2168 FBgn0011300 981.73 24.67666667 37.73 0.00203722 0.081048224 0.053008216 -13 -22 -17.5 0.01 dme-miR-965-3p 6mer3-8 TACGCT 2R 8969659 8969664 - 2R_8969659_8969664_- 1 1 1 0 CG8213 FBtr0339307|FBtr0273385|FBtr0273384 8969344|8969344|8969344 8971208|8970017|8970017 2R - 8969635 8969679 3'utr CG8213 FlyBase G21162.1 AGTCTGAATGAGAATTACGCTGATTGCAAAACGTAGGGATAAGAC 6 8969660 0.974791014 3 4 30 0.875 0.84509804 0.125 0.333333333 0.5 6 1 0 7 2R:8969635-8969679 6 CG8213 FBtr0273384|FBtr0339307|FBtr0273385 8969344|8969344|8969344 8970017|8971208|8970017 TACGCT 6mer3-8 dme-miR-965-3p 2R - 8969635 8969699 3'utr CG8213 FlyBase G16043.1 CGCGTGCCTAACACTTGTAGAGTCTGAATGAGAATTACGCTGATTGCAAAACGTAGGGATAAGAC 8 8969664 0.970780457 6 7 45 0.923076923 1.079181246 0.230769231 0.5 0.692307692 8 1 0 12 2R:8969635-8969699 6 5 2169 FBgn0033359 56 1.02 1.516666667 0.089285714 4.901960784 3.296703297 -4 0 -2 0.01 dme-miR-317-3p 8mer-A1 TGTGTTCA 2R 9097257 9097264 - 2R_9097257_9097264_- 0.631136783 0.631136783 0.631136783 0 CG8078 FBtr0088631 9096929 9097310 2R - 9097242 9097293 3'utr CG8078 FlyBase G21171.1 ATTTATTCGTGATTCCACAAGATACAAATTGTGTTCATCCAAGGTTGCCAAC 11 9097265 0.790419418 2 11 93 1 1.079181246 0.166666667 0.090909091 0.166666667 11 0 0 12 2R:9097242-9097293 8 CG8078 FBtr0088631 9096929 9097310 TGTGTTCA 8mer-A1 dme-miR-317-3p 2R - 9097240 9097287 3'utr CG8078 FlyBase G16050.1 TCGTGATTCCACAAGATACAAATTGTGTTCATCCAAGGTTGCCAACCT 8 9097265 0.980348838 2 8 60 1 1.079181246 0.166666667 0.25 0.5 8 0 0 12 2R:9097240-9097287 8 9 2170 FBgn0033375 108.7933333 8.903333333 13.57 0.082725657 1.010857357 0.663227708 1 1 1 0.01 dme-miR-1002-5p 6mer3-8 CTACTT 2R 9105448 9105453 + 2R_9105448_9105453_+ 0.993899332 0.997681305 0.995790319 0.002674278 Vang FBtr0088566 9105387 9106796 2R + 9105427 9105480 stop_codon Vang FlyBase G14220.1 TAGCAACCAGACGCAATCGTCCTACTTGCATGTGTTTGTCTGATTTTCCCAGCT 10 9105449 0.965134252 5 10 56 1 1.113943352 0.230769231 0.3 0.461538462 10 0 0 13 2R:9105427-9105480 6 Vang FBtr0088566 9105387 9106796 CTACTT 6mer3-8 dme-miR-1002-5p 2R + 9105401 9105475 stop_codon Vang FlyBase G10814.1 GCCCCTCCAATCAACACTCCCACTCATAGCAACCAGACGCAATCGTCCTACTTGCATGTGTTTGTCTGATTTTCC 13 9105449 0.983290241 8 11 81 0.875 1.146128036 0.0625 0.333333333 0.5 12 2 0 14 2R:9105401-9105475 6 9 2171 FBgn0015838 1538.993333 53.09333333 81.26666667 0.005847979 0.169512808 0.110746514 -1 -1 -1 0.01 dme-miR-980-3p 6mer2-7 GCAGCT 2R 9105997 9106002 + 2R_9105997_9106002_+ 0.999999993 0.999999999 0.999999996 0 Vang FBtr0330624|FBtr0088566 9105468|9105387 9106796|9106796 2R + 9105863 9106011 3'utr Vang FlyBase G14221.3 GTATCATCCTAAACCGACGCGAACATATCACACCCTTTGATAAGCAAACATGACTTACAAGTTCCCAAAGTATTAATTATAAGAATGATGGTTTGGCTTGCCGAACCGCGATCTTCAGATATCAACTCTTAAATGCAGCTCTTTTATAC 125 9105996 0.869110199 27 113 912 0.918367347 1.528273777 0.108843537 0.177419355 0.306122449 124 9 3 135 2R:9105863-9106011 6 Vang FBtr0330624|FBtr0088566 9105468|9105387 9106796|9106796 GCAGCT 6mer2-7 dme-miR-980-3p 2R + 9105695 9106021 3'utr Vang FlyBase G10815.1 AAGTTTAGAAAGGAAAAGTTGTTGTGAGAACAAAATGTCTAGGCAGGCCTCAGCAGCTAAATTTTGATCTTGTAACAAATGATTATTAGATGAGAAGGCAACGTACTTATCAGTGCTAAACTTGAACTTATGACCCGAATATCAAGAAACAATGCTCAAAAGCCCAGTGTATCATCCTAAACCGACGCGAACATATCACACCCTTTGATAAGCAAACATGACTTACAAGTTCCCAAAGTATTAATTATAAGAATGATGGTTTGGCTTGCCGAACCGCGATCTTCAGATATCAACTCTTAAATGCAGCTCTTTTATACACGATTTTTA 161 9105996 0.896804901 44 142 1132 0.902542373 1.425289616 0.199152542 0.347826087 0.555084746 161 16 7 213 2R:9105695-9106021 6 69 2172 FBgn0015838 1538.993333 53.09333333 81.26666667 0.044834502 1.299598192 0.849056604 1 1 1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 9106091 9106096 + 2R_9106091_9106096_+ 0.755363009 0.755363009 0.755363009 0 Vang FBtr0330624|FBtr0330624|FBtr0330624|FBtr0088566|FBtr0088566|FBtr0088566 9105468|9105468|9105468|9105387|9105387|9105387 9106796|9106796|9106796|9106796|9106796|9106796 2R + 9106074 9106227 3'utr Vang FlyBase G14222.1 AAAATTTTACCCGATATCTGTGAGGCGTGAGCCCGATCGCTAGCCTTAAGAAGGAATGGAGTGAGCCAAGGCAAGCCCATGGAATTTTAGCTAGGACTCGGACTTGCGTCGAAAGTGCATTGGCCACTTTTGACGCGACTTAATAAGATTTTAC 66 9106080 0.95527165 17 56 390 0.837837838 1.792391689 0.459459459 0.106060606 0.202702703 66 12 0 62 2R:9106074-9106227 6 Vang FBtr0330624|FBtr0330624|FBtr0330624|FBtr0088566|FBtr0088566|FBtr0088566 9105468|9105468|9105468|9105387|9105387|9105387 9106796|9106796|9106796|9106796|9106796|9106796 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 9106073 9106191 3'utr Vang FlyBase G10816.1 TAAAATTTTACCCGATATCTGTGAGGCGTGAGCCCGATCGCTAGCCTTAAGAAGGAATGGAGTGAGCCAAGGCAAGCCCATGGAATTTTAGCTAGGACTCGGACTTGCGTCGAAAGTGC 30 9106080 0.997749131 11 27 164 0.897959184 1.643452676 0.428571429 0.466666667 0.673469388 30 5 0 44 2R:9106073-9106191 6 17 2173 FBgn0015838 1538.993333 53.09333333 81.26666667 0.011046182 0.320190859 0.209187859 11 11 11 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 2R 9106357 9106363 + 2R_9106357_9106363_+ 0.620204266 0.620204266 0.620204266 0 Vang FBtr0330624|FBtr0088566 9105468|9105387 9106796|9106796 2R + 9106296 9106373 3'utr Vang FlyBase G14224.1 CAACTATAACTCGAATGCAACTGATGACAAATACATAATATAAGCGAAGACTGCCTGAATATGCATTTTATACACACA 50 9106352 0.767491 11 47 248 0.964912281 1.740362689 0.070175439 0.14 0.245614035 50 2 0 55 2R:9106296-9106373 7 Vang FBtr0330624|FBtr0088566 9105468|9105387 9106796|9106796 TGCATTT 7mer-m8 dme-miR-277-3p 2R + 9106301 9106525 3'utr Vang FlyBase G10818.1 ATAACTCGAATGCAACTGATGACAAATACATAATATAAGCGAAGACTGCCTGAATATGCATTTTATACACACAAATTGCCAACAGCCACTAGCAGGTGTATGTACTAGCCTGTGCATAGCAACCACATATATACAAAAACTCGTGTATTTTTAGAGACAAAATTATAGTGATAAGGACCCGAATTCGTATTCGAACATGTGTACGTTCCAGTGAACCCAATCTAT 93 9106351 0.969636089 28 88 494 0.937931034 2.133538908 0.172413793 0.397849462 0.613793103 93 9 0 136 2R:9106301-9106525 7 16.5 2174 FBgn0015838 1538.993333 53.09333333 81.26666667 0.010721294 0.310773481 0.203035275 5 6 5.5 0.01 dme-miR-184-5p 8mer-m1 TGATAAGG 2R 9106469 9106476 + 2R_9106469_9106476_+ 0.614713882 0.614713882 0.614713882 0 Vang FBtr0330624|FBtr0088566 9105468|9105387 9106796|9106796 2R + 9106391 9106540 3'utr Vang FlyBase G14225.1 AGCAGGTGTATGTACTAGCCTGTGCATAGCAACCACATATATACAAAAACTCGTGTATTTTTAGAGACAAAATTATAGTGATAAGGACCCGAATTCGTATTCGAACATGTGTACGTTCCAGTGAACCCAATCTATATATACATACATATA 74 9106465 0.751833902 22 68 433 0.929292929 1.486666573 0.212121212 0.256756757 0.444444444 74 5 2 92 2R:9106391-9106540 8 Vang FBtr0330624|FBtr0088566 9105468|9105387 9106796|9106796 TGATAAGG 8mer-m1 dme-miR-184-5p 2R + 9106301 9106525 3'utr Vang FlyBase G10818.1 ATAACTCGAATGCAACTGATGACAAATACATAATATAAGCGAAGACTGCCTGAATATGCATTTTATACACACAAATTGCCAACAGCCACTAGCAGGTGTATGTACTAGCCTGTGCATAGCAACCACATATATACAAAAACTCGTGTATTTTTAGAGACAAAATTATAGTGATAAGGACCCGAATTCGTATTCGAACATGTGTACGTTCCAGTGAACCCAATCTAT 93 9106465 0.969636089 28 88 494 0.937931034 2.133538908 0.172413793 0.397849462 0.613793103 93 9 0 136 2R:9106301-9106525 8 27.5 2175 FBgn0015838 1538.993333 53.09333333 81.26666667 0.017868823 0.517955801 0.338392125 4 4 4 0.01 dme-miR-318-3p 7mer-A1 CCAGTGA 2R 9106508 9106514 + 2R_9106508_9106514_+ 0.823349562 0.823349562 0.823349562 0 Vang FBtr0330624|FBtr0088566 9105468|9105387 9106796|9106796 2R + 9106391 9106540 3'utr Vang FlyBase G14225.1 AGCAGGTGTATGTACTAGCCTGTGCATAGCAACCACATATATACAAAAACTCGTGTATTTTTAGAGACAAAATTATAGTGATAAGGACCCGAATTCGTATTCGAACATGTGTACGTTCCAGTGAACCCAATCTATATATACATACATATA 74 9106484 0.751833902 22 68 433 0.929292929 1.486666573 0.212121212 0.256756757 0.444444444 74 5 2 92 2R:9106391-9106540 7 Vang FBtr0330624|FBtr0088566 9105468|9105387 9106796|9106796 CCAGTGA 7mer-A1 dme-miR-318-3p 2R + 9106301 9106525 3'utr Vang FlyBase G10818.1 ATAACTCGAATGCAACTGATGACAAATACATAATATAAGCGAAGACTGCCTGAATATGCATTTTATACACACAAATTGCCAACAGCCACTAGCAGGTGTATGTACTAGCCTGTGCATAGCAACCACATATATACAAAAACTCGTGTATTTTTAGAGACAAAATTATAGTGATAAGGACCCGAATTCGTATTCGAACATGTGTACGTTCCAGTGAACCCAATCTAT 93 9106506 0.969636089 28 88 494 0.937931034 2.133538908 0.172413793 0.397849462 0.613793103 93 9 0 136 2R:9106301-9106525 7 17.5 2176 FBgn0015838 1538.993333 53.09333333 81.26666667 0.011371069 0.329608237 0.215340443 24 2 13 0.01 dme-miR-190-5p 6mer3-8 ACATAT 2R 9119425 9119430 + 2R_9119425_9119430_+ 1 1 1 0 Su(var)2-10 FBtr0088576|FBtr0088571|FBtr0088574 9119072|9119072|9119072 9120105|9120105|9119480 2R + 9119395 9119448 5'utr Su(var)2-10 FlyBase G14242.1 ATTGTCCAAAATGAAAATTACATATATGTTACATATGATTCTGACTTCATCATC 7 9119430 0.98713905 6 7 62 1 0.954242509 0 0.142857143 0.333333333 7 0 0 9 2R:9119395-9119448 6 Su(var)2-10 FBtr0088571|FBtr0088574|FBtr0088576 9119072|9119072|9119072 9120105|9119480|9120105 ACATAT 6mer3-8 dme-miR-190-5p 2R + 9119420 9119451 5'utr Su(var)2-10 FlyBase G10838.1 ATGTTACATATGATTCTGACTTCATCATCACT 5 9119442 0.94091494 3 5 38 1 0.84509804 0 0.4 0.571428571 5 0 0 7 2R:9119420-9119451 6 4.5 2177 FBgn0003612 1532.696667 79.66 122.23 0.002936002 0.056490083 0.036815839 -5 -17 -11 0.01 dme-miR-970-3p 7mer-A1 CTTATGA 2R 9119488 9119494 + 2R_9119488_9119494_+ 0.823349562 0.823349562 0.823349562 0 Su(var)2-10 FBtr0088576|FBtr0088571 9119072|9119072 9120105|9120105 2R + 9119449 9119506 5'utr-coding Su(var)2-10 FlyBase G14243.1 ACTTATTGTTATTCAAATATAATTAGGTCCCCGATTCCGCTTATGACTTTAGTGCATC 65 9119483 0.97968658 8 63 434 0.986666667 1.86923172 0.173333333 0.153846154 0.266666667 65 1 0 74 2R:9119449-9119506 7 Su(var)2-10 FBtr0088571|FBtr0088576 9119072|9119072 9120105|9120105 CTTATGA 7mer-A1 dme-miR-970-3p 2R + 9119464 9119504 5'utr-coding Su(var)2-10 FlyBase G10839.1 AATATAATTAGGTCCCCGATTCCGCTTATGACTTTAGTGCA 56 9119483 0.837976182 3 55 363 0.975308642 1.897627091 0.296296296 0.339285714 0.543209877 56 2 0 79 2R:9119464-9119504 7 59.5 2178 FBgn0003612 1532.696667 79.66 122.23 0.038820467 0.746924429 0.486787204 5 5 5 0.01 dme-miR-184-5p 6mer3-8 TGATAA 2R 9119616 9119621 + 2R_9119616_9119621_+ 0.99035177 1 0.995175885 0.006822308 Su(var)2-10 FBtr0088576|FBtr0088571 9119072|9119072 9120105|9120105 2R + 9119574 9119647 3'utr Su(var)2-10 FlyBase G14244.1 ATGTTTATGTTTCAAAAAAGTGACCAGAAGGGCTATTTATCATGATAATTTTGTGTTAGATCTACGGAGTCCAG 7 9119623 0.986005129 6 7 61 1 0.84509804 0.714285714 0 0 7 0 0 7 2R:9119574-9119647 6 Su(var)2-10 FBtr0088571|FBtr0088576 9119072|9119072 9120105|9120105 TGATAA 6mer3-8 dme-miR-184-5p 2R + 9119579 9119646 3'utr Su(var)2-10 FlyBase G10840.1 TATGTTTCAAAAAAGTGACCAGAAGGGCTATTTATCATGATAATTTTGTGTTAGATCTACGGAGTCCA 11 9119610 0.968500286 6 10 61 1 1.255272505 0.055555556 0.363636364 0.611111111 11 0 0 18 2R:9119579-9119646 6 4 2179 FBgn0003612 1532.696667 79.66 122.23 0.002609779 0.050213407 0.03272519 -7 6 -0.5 0.01 dme-miR-317-3p 7mer-A1 GTGTTCA 2R 9119801 9119807 + 2R_9119801_9119807_+ 0.823349562 0.823349562 0.823349562 0 Su(var)2-10 FBtr0088576|FBtr0088571 9119072|9119072 9120105|9120105 2R + 9119673 9119874 3'utr Su(var)2-10 FlyBase G14245.1 GTAAAATCCCCTAGCCAAAACTTGTATAGACTAAGTAGGCTATAAATTGACTCTATCCGCTTTCGTTGCTTGTATTGTAGGTGGTAATGTTTTTAAAAAACCTCAGAAAGCGGAGGAGCTTTACAAGCGTGTTCATTTAGGAGTTTGGCTGCGCCCACGGTATGTTTTCCGTCGATCGATTGTGAAATGGTTCGGGTTTGGA 73 9119808 0.908630734 21 70 597 0.948979592 1.968482949 0.469387755 0.232876712 0.428571429 73 5 0 93 2R:9119673-9119874 7 Su(var)2-10 FBtr0088571|FBtr0088576 9119072|9119072 9120105|9120105 GTGTTCA 7mer-A1 dme-miR-317-3p 2R + 9119772 9119821 3'utr Su(var)2-10 FlyBase G10842.1 ACCTCAGAAAGCGGAGGAGCTTTACAAGCGTGTTCATTTAGGAGTTTGGC 26 9119808 0.983712664 5 25 196 0.970588235 1.51851394 0.323529412 0.307692308 0.470588235 26 1 0 33 2R:9119772-9119821 7 32 2180 FBgn0003612 1532.696667 79.66 122.23 0.020878234 0.401707256 0.261801522 -7 -7 -7 0.01 dme-miR-282-5p 8mer-A1 AGAGGCTA 2R 9120674 9120681 + 2R_9120674_9120681_+ 0.63790686 0.63790686 0.63790686 0 Su(var)2-10 FBtr0088577|FBtr0088570|FBtr0088575 9120537|9120537|9120537 9120816|9120816|9120816 2R + 9120631 9120719 3'utr Su(var)2-10 FlyBase G14248.1 TTTTCGGTTTCACTTCCGGTGGCGCACGGCCACATATTACCTTAGAGGCTATTCTTCGGCGTTCGATTCGCCGCCTTGCATCACCTCAT 36 9120673 0.985591309 9 35 289 0.953488372 1.612783857 0.069767442 0.194444444 0.325581395 36 2 0 41 2R:9120631-9120719 8 Su(var)2-10 FBtr0088575|FBtr0088570|FBtr0088577 9120537|9120537|9120537 9120816|9120816|9120816 AGAGGCTA 8mer-A1 dme-miR-282-5p 2R + 9120656 9120695 3'utr Su(var)2-10 FlyBase G10846.1 ACGGCCACATATTACCTTAGAGGCTATTCTTCGGCGTTCG 20 9120673 0.771858149 4 17 148 0.857142857 1.380211242 0.142857143 0.35 0.535714286 20 4 0 24 2R:9120656-9120695 8 25 2181 FBgn0003612 1532.696667 79.66 122.23 0.01631112 0.313833794 0.204532439 1 1 1 0.01 dme-miR-1012-3p 7mer-m8 TTGACTA 2R 9121505 9121511 + 2R_9121505_9121511_+ 0.625249933 0.631516274 0.628383104 0.004431014 Su(var)2-10 FBtr0302506|FBtr0343996 9121130|9121130 9121610|9121610 2R + 9121494 9121534 3'utr Su(var)2-10 FlyBase G14252.1 TGAACAATGCTTTGACTATGACATGATGCAAACCCCCTAAA 38 9121516 0.767068584 7 35 258 0.902439024 1.091080469 0.024390244 0.078947368 0.146341463 38 2 2 37 2R:9121494-9121534 7 Su(var)2-10 FBtr0343996|FBtr0302506 9121130|9121130 9121610|9121610 TTGACTA 7mer-m8 dme-miR-1012-3p 2R + 9121494 9121551 3'utr Su(var)2-10 FlyBase G10848.1 TGAACAATGCTTTGACTATGACATGATGCAAACCCCCTAAATATCTGAACGAACAAAT 17 9121517 0.980262531 5 15 108 0.846153846 1.342422681 0.076923077 0.470588235 0.653846154 17 4 0 22 2R:9121494-9121551 7 26 2182 FBgn0003612 1532.696667 79.66 122.23 0.016963565 0.326387145 0.212713736 -11 -12 -11.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2R 9121859 9121865 + 2R_9121859_9121865_+ 0.823349562 0.823349562 0.823349562 0 Su(var)2-10 FBtr0302507|FBtr0302505 9121805|9121805 9122000|9122000 2R + 9121843 9121930 3'utr Su(var)2-10 FlyBase G14254.1 AATATCATTAGGCGACCCAAAGAATTAGACTTGGCCTGTTAAGTTAACTTAATGCGCCACAAGTGTATTGTAGCATTCTAAGTATGTT 436 9121867 0.86279952 14 433 2817 0.993914807 2.389166084 0.103448276 0.121559633 0.223123732 436 2 1 490 2R:9121843-9121930 7 Su(var)2-10 FBtr0302507|FBtr0302505 9121805|9121805 9122000|9122000 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 9121842 9121926 3'utr Su(var)2-10 FlyBase G10849.1 CAATATCATTAGGCGACCCAAAGAATTAGACTTGGCCTGTTAAGTTAACTTAATGCGCCACAAGTGTATTGTAGCATTCTAAGTA 222 9121867 0.857190383 11 215 1405 0.961538462 2.034762106 0.127218935 0.36036036 0.579881657 222 11 2 325 2R:9121842-9121926 7 309.5 2183 FBgn0003612 1532.696667 79.66 122.23 0.201931672 3.885262365 2.532111593 -8 -8 -8 0.01 dme-miR-965-3p 6mer3-8 TACGCT 2R 9123400 9123405 - 2R_9123400_9123405_- 1 1 1 0 CG18659 FBtr0339371|FBtr0306382|FBtr0339372|FBtr0088626|FBtr0306381|FBtr0302497|FBtr0302498 9123302|9123302|9123302|9123302|9123302|9123302|9123302 9127111|9125499|9123701|9123701|9127111|9123701|9123701 2R - 9123308 9123462 3'utr CG18659 FlyBase G21196.1 TTTAACAATTGCATGAATCGGAACTCTCGCTAACTACGCATACTTACATACATATTGTACGCTGGACTTCCAAATCAAAAGACACAAGAATCTAGAGTAGCATGAATTTAAGCCAATTAGCCTAACAAATTACCAATAAATATAAAATAAATTCC 113 9123396 0.962317556 17 109 561 0.970588235 1.819543936 0.139705882 0.168141593 0.308823529 113 3 1 132 2R:9123308-9123462 6 CG18659 FBtr0339372|FBtr0306382|FBtr0339371|FBtr0302498|FBtr0302497|FBtr0306381|FBtr0088626 9123302|9123302|9123302|9123302|9123302|9123302|9123302 9123701|9125499|9127111|9123701|9123701|9127111|9123701 TACGCT 6mer3-8 dme-miR-965-3p 2R - 9123320 9123459 3'utr CG18659 FlyBase G16073.1 AACAATTGCATGAATCGGAACTCTCGCTAACTACGCATACTTACATACATATTGTACGCTGGACTTCCAAATCAAAAGACACAAGAATCTAGAGTAGCATGAATTTAAGCCAATTAGCCTAACAAATTACCAATAAATAT 87 9123399 0.964967362 16 85 445 0.967479675 1.598425707 0.097560976 0.310344828 0.512195122 87 2 2 119 2R:9123320-9123459 6 77 2184 FBgn0027561 809.6966667 28.81666667 43.97666667 0.095097341 2.672064777 1.750928523 -9 -6 -7.5 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2R 9123645 9123651 - 2R_9123645_9123651_- 0.521223855 0.521223855 0.521223855 0 CG18659 FBtr0339371|FBtr0306382|FBtr0339372|FBtr0088626|FBtr0306381|FBtr0302497|FBtr0302498 9123302|9123302|9123302|9123302|9123302|9123302|9123302 9127111|9125499|9123701|9123701|9127111|9123701|9123701 2R - 9123591 9123681 3'utr CG18659 FlyBase G21197.2 AACCTGCATCAAATATGATACCAAAATAAGTGTGATTGATAGATTGTGTTGTAAATAGCTAGGAGAGATAGGCAAAATCAAGGATGGGAGA 442 9123645 0.950367801 19 415 2369 0.941287879 1.617175143 0.115530303 0.167420814 0.303030303 442 20 11 497 2R:9123591-9123681 7 CG18659 FBtr0339372|FBtr0306382|FBtr0339371|FBtr0302498|FBtr0302497|FBtr0306381|FBtr0088626 9123302|9123302|9123302|9123302|9123302|9123302|9123302 9123701|9125499|9127111|9123701|9123701|9127111|9123701 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 9123591 9123690 3'utr CG18659 FlyBase G16074.3 TGGTCAGATAACCTGCATCAAATATGATACCAAAATAAGTGTGATTGATAGATTGTGTTGTAAATAGCTAGGAGAGATAGGCAAAATCAAGGATGGGAGA 346 9123645 0.926405101 19 322 2065 0.931863727 1.588271707 0.162324649 0.341040462 0.543086172 346 23 11 465 2R:9123591-9123690 7 242 2185 FBgn0027561 809.6966667 28.81666667 43.97666667 0.298877357 8.397917872 5.502918214 -6 -6 -6 0.01 dme-bantam-3p 6mer3-8 TGATCT 2R 9124111 9124116 - 2R_9124111_9124116_- 1 1 1 0 CG18659 FBtr0339371|FBtr0306382|FBtr0306381 9123302|9123302|9123302 9127111|9125499|9127111 2R - 9124007 9124142 3'utr CG18659 FlyBase G21199.1 CAGCAGCCACTGGAGGACAGCATGAATGATCTGATATCGCTGGACGATAGCAACAACACCAGCTTCGACCTGGAGGACTTCGATCCGCTCAATCAGAATGCTCGTCCGTTGCCGCCGCTCAGCACGGCATTTGCCA 111 9124116 0.96974228 14 107 605 0.95620438 1.8162413 0.299270073 0.189189189 0.343065693 111 5 1 131 2R:9124007-9124142 6 CG18659 FBtr0306382|FBtr0339371|FBtr0306381 9123302|9123302|9123302 9125499|9127111|9127111 TGATCT 6mer3-8 dme-bantam-3p 2R - 9124093 9124144 3'utr CG18659 FlyBase G16078.1 AACAGCAGCCACTGGAGGACAGCATGAATGATCTGATATCGCTGGACGATAG 30 9124116 0.891078334 2 28 169 0.952380952 1.602059991 0.452380952 0.266666667 0.476190476 30 2 0 40 2R:9124093-9124144 6 55 2186 FBgn0027561 809.6966667 28.81666667 43.97666667 0.067926672 1.908617698 1.250663231 0 0 0 0.01 dme-miR-278-3p 7mer-A1 CCACCGA 2R 9124998 9125004 - 2R_9124998_9125004_- 0.823349562 0.823349562 0.823349562 0 CG18659 FBtr0339371|FBtr0306382|FBtr0306381 9123302|9123302|9123302 9127111|9125499|9127111 2R - 9124877 9125070 5'utr CG18659 FlyBase G21201.1 AGACCGCGTCAGCCCCTGCCTACCGCCGATTCCAGCAGCTTTGATAGTCCGCCGGACGTACAATCTCCACCGATTCCGCCCCGGAGGCAGGGCAGCTCGAATGCGATTGTGGCGGCCACGGCTGCAGCCGTCAGTGCAGAGATTAGCAAACTGGAACGTAACTGCTGGAAGGACGAGCCCGGAAATGATTCTGT 488 9124997 0.895668955 13 487 1430 0.990654206 2.72427587 0.011214953 0.081967213 0.162616822 488 5 0 530 2R:9124877-9125070 7 CG18659 FBtr0306382|FBtr0339371|FBtr0306381 9123302|9123302|9123302 9125499|9127111|9127111 CCACCGA 7mer-A1 dme-miR-278-3p 2R - 9124953 9125011 5'utr CG18659 FlyBase G16081.1 ACAATCTCCACCGATTCCGCCCCGGAGGCAGGGCAGCTCGAATGCGATTGTGGCGGCCA 160 9124997 0.895102274 3 156 462 0.973568282 1.566241023 0.013215859 0.35 0.54185022 160 1 5 221 2R:9124953-9125011 7 314 2187 FBgn0027561 809.6966667 28.81666667 43.97666667 0.387799546 10.89647195 7.14015008 -7 -7 -7 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 2R 9125431 9125436 - 2R_9125431_9125436_- 0.999971024 0.999904587 0.999937806 4.70E-05 CG18659 FBtr0306382 9123302 9125499 2R - 9125399 9125482 5'utr CG18659 FlyBase G21203.1 AGCCGTTCACATGCTTGCCGCTAAGCTAAATCGACCACTCATCTCGATGTGCTGTGAATTTATGTTGTTCTCATGCTCTTCTTG 165 9125435 0.987219047 8 162 1432 0.989189189 2.26245109 0.064864865 0.109090909 0.205405405 165 2 0 183 2R:9125399-9125482 6 CG18659 FBtr0306382 9123302 9125499 ATGTGC 6mer3-8 dme-miR-305-3p 2R - 9125385 9125483 5'utr CG18659 FlyBase G16083.1 CAGCCGTTCACATGCTTGCCGCTAAGCTAAATCGACCACTCATCTCGATGTGCTGTGAATTTATGTTGTTCTCATGCTCTTCTTGTTTTTGTTTCCTTG 142 9125435 0.988007058 9 138 1247 0.977578475 1.736396502 0.058295964 0.457746479 0.65470852 142 2 3 218 2R:9125385-9125483 6 144 2188 FBgn0027561 809.6966667 28.81666667 43.97666667 0.177844378 4.997108155 3.274463731 -1 -1 -1 0.01 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 2R 9125683 9125689 - 2R_9125683_9125689_- 0.620204031 0.620204031 0.620204031 0 CG18659 FBtr0339371|FBtr0306381 9123302|9123302 9127111|9127111 2R - 9125553 9125720 5'utr CG18659 FlyBase G21204.1 AGCCGAACGGCCATGCGTACGGTGCGAGTGCTGGTGCTCATTATGGTCATCATCTCGCTGCGTCTCCTGCTGTTAGCTCGGCGAGCTCGCTCTGCTCATCTTCGGAGATGAACCTGTCGCAGGAACTGCAGAACCATCCGCTTTTCAAGACGCCGGCAGTGGACCGCA 34 9125679 0.981685229 17 29 209 0.85 0.929418926 0.225 0.176470588 0.3 34 3 3 34 2R:9125553-9125720 7 CG18659 FBtr0339371|FBtr0306381 9123302|9123302 9127111|9127111 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 2R - 9125679 9125707 5'utr CG18659 FlyBase G16085.1 TGCGTACGGTGCGAGTGCTGGTGCTCATT 8 9125686 0.753738528 3 8 42 1 1.113943352 0.153846154 0.5 0.692307692 8 0 0 13 2R:9125679-9125707 7 8 2189 FBgn0027561 809.6966667 28.81666667 43.97666667 0.009880243 0.27761712 0.181914652 -10 -3 -6.5 0.01 dme-miR-184-3p 6mer2-7 CCGTCC 2R 9125754 9125759 - 2R_9125754_9125759_- 1 1 1 0 CG18659 FBtr0339371|FBtr0306381 9123302|9123302 9127111|9127111 2R - 9125738 9125801 5'utr CG18659 FlyBase G21205.1 GATCCGGCGCCAGGGAGCCGCGGGAGTTCCTGCGACGCGGTCCCGTCCCGCTGGCCATGTCTAG 10 9125761 0.944864259 3 9 37 1 1 0.6 0 0 10 0 0 10 2R:9125738-9125801 6 CG18659 FBtr0339371|FBtr0306381 9123302|9123302 9127111|9127111 CCGTCC 6mer2-7 dme-miR-184-3p 2R - 9125726 9125777 5'utr CG18659 FlyBase G16086.1 AGTTCCTGCGACGCGGTCCCGTCCCGCTGGCCATGTCTAGCTCGAGCAGCCA 6 9125761 0.942814823 2 5 23 0.777777778 0.84509804 0 0.5 0.666666667 6 2 0 7 2R:9125726-9125777 6 7 2190 FBgn0027561 809.6966667 28.81666667 43.97666667 0.008645213 0.24291498 0.15917532 2 2 2 0.01 dme-miR-995-5p 7mer-A1 ATTCGGA 2R 9125942 9125948 - 2R_9125942_9125948_- 0.782911824 0.782911824 0.782911824 0 CG18659 FBtr0339371|FBtr0306381 9123302|9123302 9127111|9127111 2R - 9125919 9125987 5'utr CG18659 FlyBase G21207.1 GTGGCACGCACTTCCACTTTGGACTTGGCTCCCCGAATCATTCGGATCGTCCTGACGGCACCAGCGGAG 19 9125968 0.973974379 8 19 117 1 1.322219295 0.238095238 0.105263158 0.19047619 19 0 0 21 2R:9125919-9125987 7 CG18659 FBtr0339371|FBtr0306381 9123302|9123302 9127111|9127111 ATTCGGA 7mer-A1 dme-miR-995-5p 2R - 9125918 9125972 5'utr CG18659 FlyBase G16087.1 ACTTTGGACTTGGCTCCCCGAATCATTCGGATCGTCCTGACGGCACCAGCGGAGG 9 9125935 0.965487522 3 9 49 1 1.146128036 0 0.444444444 0.642857143 9 0 0 14 2R:9125918-9125972 7 9 2191 FBgn0027561 809.6966667 28.81666667 43.97666667 0.011115274 0.31231926 0.204653983 20 -13 3.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 9135182 9135188 + 2R_9135182_9135188_+ 0.754178726 0.754178349 0.754178537 2.83E-07 Hydr1 FBtr0300180|FBtr0300180|FBtr0300180|FBtr0339361|FBtr0339361|FBtr0339361|FBtr0339360|FBtr0339360|FBtr0339360|FBtr0302496|FBtr0302496|FBtr0302496|FBtr0088580|FBtr0088580|FBtr0088580 9135052|9135052|9135052|9135052|9135052|9135052|9135052|9135052|9135052|9135052|9135052|9135052|9135052|9135052|9135052 9135453|9135453|9135453|9135453|9135453|9135453|9135453|9135453|9135453|9135453|9135453|9135453|9135453|9135453|9135453 2R + 9135074 9135254 3'utr Hydr1 FlyBase G14265.1 GGTCGGTCGGTCCGCTAGTCTAGTTCAGTTTTTGTCCAGTTGAACACGTAGATATACGAGAATGTTTGTATTCCGATAGATTGCCGTCGGCGAAGACTCTTGTACACATGTGATATGAAACGTTGATCAAAATCCAAAGTGTTGTTATACTTATATACAGCGAACAGGGAACCAAATTATC 55 9135174 0.978282638 20 51 338 0.930555556 1.826074803 0.208333333 0.236363636 0.416666667 55 5 0 67 2R:9135074-9135254 7 Hydr1 FBtr0088580|FBtr0088580|FBtr0088580|FBtr0302496|FBtr0302496|FBtr0302496|FBtr0339360|FBtr0339360|FBtr0339360|FBtr0339361|FBtr0339361|FBtr0339361|FBtr0300180|FBtr0300180|FBtr0300180 9135052|9135052|9135052|9135052|9135052|9135052|9135052|9135052|9135052|9135052|9135052|9135052|9135052|9135052|9135052 9135453|9135453|9135453|9135453|9135453|9135453|9135453|9135453|9135453|9135453|9135453|9135453|9135453|9135453|9135453 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 9135130 9135221 3'utr Hydr1 FlyBase G10857.1 CGAGAATGTTTGTATTCCGATAGATTGCCGTCGGCGAAGACTCTTGTACACATGTGATATGAAACGTTGATCAAAATCCAAAGTGTTGTTAT 35 9135173 0.928514117 14 33 199 0.942307692 1.389166084 0.173076923 0.314285714 0.538461538 35 2 1 49 2R:9135130-9135221 7 20.5 2192 FBgn0033382 206.7266667 10.77333333 16.46666667 0.099164759 1.902846535 1.244939271 8 9 8.5 0.01 dme-miR-190-5p 8mer-A1 ACATATCA 2R 9135308 9135315 + 2R_9135308_9135315_+ 0.612817321 0.612817321 0.612817321 0 Hydr1 FBtr0300180|FBtr0339361|FBtr0339360|FBtr0302496|FBtr0088580 9135052|9135052|9135052|9135052|9135052 9135453|9135453|9135453|9135453|9135453 2R + 9135284 9135320 3'utr Hydr1 FlyBase G14266.1 TACTCTTAGATCGTGACTTTAGTGACATATCAGGTTG 6 9135302 0.820679188 4 6 51 1 0.903089987 0.5 0.333333333 0.5 6 0 0 8 2R:9135284-9135320 8 Hydr1 FBtr0088580|FBtr0302496|FBtr0339360|FBtr0339361|FBtr0300180 9135052|9135052|9135052|9135052|9135052 9135453|9135453|9135453|9135453|9135453 ACATATCA 8mer-A1 dme-miR-190-5p 2R + 9135288 9135338 3'utr Hydr1 FlyBase G10858.1 CTTAGATCGTGACTTTAGTGACATATCAGGTTGAAATTGCAAATAAGCTGT 5 9135302 0.97404207 5 5 28 1 0.903089987 0.125 0.6 0.75 5 0 0 8 2R:9135288-9135338 8 4 2193 FBgn0033382 206.7266667 10.77333333 16.46666667 0.019349221 0.371287129 0.24291498 6 6 6 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 2R 9142436 9142442 - 2R_9142436_9142442_- 0.443131018 0.443131018 0.443131018 0 shrb FBtr0088623 9142144 9142614 2R - 9142383 9142515 3'utr shrb FlyBase G21228.1 AGTTCGAAGCGAGGGAGAGAATACAAGGCATTAATTCCTTTGGCAATTCAACAAATGGTACATAAACTAGGAATGTGATTTTAAAATAAACGAAATAAGCATAGTCAGGCCTCACATGAGCAAAAGTAGGTAT 224 9142436 0.979468469 20 213 1477 0.944237918 2.103803721 0.081784387 0.169642857 0.308550186 224 14 1 254 2R:9142383-9142515 7 shrb FBtr0088623 9142144 9142614 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 9142369 9142611 3'utr shrb FlyBase G16102.1 AGAGAGCTATTGAAATCTCCTTACTGTTCTGAAGATACACCCTATCGTTTTTGTTTAATTTAATAATCAATACTGCTGTTAATTAAGCAAAATTTTAGTTCGAAGCGAGGGAGAGAATACAAGGCATTAATTCCTTTGGCAATTCAACAAATGGTACATAAACTAGGAATGTGATTTTAAAATAAACGAAATAAGCATAGTCAGGCCTCACATGAGCAAAAGTAGGTATCAACGTAGTTTCAT 202 9142436 0.98006837 31 192 1355 0.959866221 2.457881897 0.127090301 0.361386139 0.568561873 202 12 0 287 2R:9142369-9142611 7 156 2194 FBgn0086656 1721.663333 168.1933333 258.54 0.09061005 0.927504063 0.603388257 -6 -6 -6 0.01 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 2R 9162302 9162309 - 2R_9162302_9162309_- 0.625364009 0.625364009 0.625364009 0 CG8046 FBtr0088621 9162035 9162726 2R - 9162278 9162328 3'utr CG8046 FlyBase G21237.1 ACTTTTGTACACCAACGATTGGTGCTAACTACGGATCTGAGCGAGCGCTAA 36 9162310 0.93375182 6 33 183 0.923076923 1.681241237 0.192307692 0.388888889 0.576923077 36 4 0 48 2R:9162278-9162328 8 CG8046 FBtr0088621 9162035 9162726 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 2R - 9162280 9162326 3'utr CG8046 FlyBase G16109.1 TTTTGTACACCAACGATTGGTGCTAACTACGGATCTGAGCGAGCGCT 31 9162310 0.824973097 7 30 164 0.951219512 1.113943352 0.195121951 0.290322581 0.463414634 31 0 2 39 2R:9162280-9162326 8 32.5 2195 FBgn0033388 91.66666667 5.236666667 8.053333333 0.354545455 6.206238065 4.035596026 1 1 1 0.01 dme-miR-932-5p 7mer-m8 GGAATTG 2R 9162508 9162514 - 2R_9162508_9162514_- 0.70297287 0.70297287 0.70297287 0 CG8046 FBtr0088620|FBtr0088621 9162424|9162035 9162726|9162726 2R - 9162504 9162537 3'utr CG8046 FlyBase G21240.1 ACAAATCCAAGCGTAGAGTTTGGGGAATTGTGCT 9 9162517 0.671581557 3 8 42 0.916666667 1.041392685 0 0.222222222 0.416666667 9 1 0 11 2R:9162504-9162537 7 CG8046 FBtr0088620|FBtr0088621 9162424|9162035 9162726|9162726 GGAATTG 7mer-m8 dme-miR-932-5p 2R - 9162498 9162534 3'utr CG8046 FlyBase G16111.1 AATCCAAGCGTAGAGTTTGGGGAATTGTGCTTTGCCA 7 9162517 0.918261274 5 7 34 1 1.041392685 0 0.428571429 0.636363636 7 0 0 11 2R:9162498-9162534 7 8 2196 FBgn0033388 91.66666667 5.236666667 8.053333333 0.087272727 1.52768937 0.993377483 3 3 3 0.01 dme-miR-190-5p 6mer3-8 ACATAT 2R 9167792 9167797 - 2R_9167792_9167797_- 1 1 1 0 Rme-8 FBtr0088618|FBtr0339370 9167761|9167761 9168133|9168133 2R - 9167793 9167820 3'utr Rme-8 FlyBase G21252.1 TAGAGCATGCATAAAGTGATTAAACATA 14 9167811 0.631008551 3 14 61 1 1.255272505 0.111111111 0.142857143 0.333333333 14 0 0 18 2R:9167793-9167820 4 Rme-8 FBtr0339370|FBtr0088618 9167761|9167761 9168133|9168133 ACATAT 6mer3-8 dme-miR-190-5p 2R - 9167791 9167823 3'utr Rme-8 FlyBase G16119.1 AACTAGAGCATGCATAAAGTGATTAAACATATT 13 9167809 0.674595167 3 12 65 0.928571429 1.113943352 0.071428571 0.076923077 0.142857143 13 1 0 13 2R:9167791-9167823 6 12 2197 FBgn0015477 1892.016667 29.22333333 44.74333333 0.006342439 0.410630774 0.268196379 14 12 13 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 2R 9167950 9167955 - 2R_9167950_9167955_- 1 1 1 0 Rme-8 FBtr0088618|FBtr0339370 9167761|9167761 9168133|9168133 2R - 9167923 9167969 3'utr Rme-8 FlyBase G21253.1 ATTGTACGTATCGTGAAAAAGGCTGGTACGGTAATCGTTAGCCAGCA 11 9167960 0.70838709 6 10 52 0.666666667 1 0.066666667 0.090909091 0.333333333 11 5 0 10 2R:9167923-9167969 6 Rme-8 FBtr0339370|FBtr0088618 9167761|9167761 9168133|9168133 GAAAAA 6mer3-8 dme-miR-980-5p 2R - 9167923 9167970 3'utr Rme-8 FlyBase G16120.1 AATTGTACGTATCGTGAAAAAGGCTGGTACGGTAATCGTTAGCCAGCA 5 9167960 0.98508412 3 4 31 0.857142857 0.77815125 0.142857143 0.2 0.428571429 5 1 0 6 2R:9167923-9167970 6 7 2198 FBgn0015477 1892.016667 29.22333333 44.74333333 0.003699756 0.239534618 0.156447888 5 5 5 0.01 dme-miR-932-5p 7mer-m8 GGAATTG 2R 9168028 9168034 - 2R_9168028_9168034_- 0.70297287 0.70297287 0.70297287 0 Rme-8 FBtr0088618|FBtr0339370 9167761|9167761 9168133|9168133 2R - 9167996 9168080 3'utr Rme-8 FlyBase G21254.1 CGCTAGCATGAAGCCTTCGATTGCCACGGAATCAGAAAACGGAAACGGAATTGCACGGGTTGCCCCCAATTATTGTATTAAACTT 20 9168009 0.70927178 8 19 119 0.952380952 1.301029996 0.095238095 0.05 0.095238095 20 1 0 20 2R:9167996-9168080 7 Rme-8 FBtr0339370|FBtr0088618 9167761|9167761 9168133|9168133 GGAATTG 7mer-m8 dme-miR-932-5p 2R - 9167989 9168042 3'utr Rme-8 FlyBase G16121.1 ACGGAAACGGAATTGCACGGGTTGCCCCCAATTATTGTATTAAACTTTATTTTA 8 9168030 0.979701294 5 6 43 0.769230769 1 0.307692308 0.5 0.692307692 8 3 0 10 2R:9167989-9168042 7 8 2199 FBgn0015477 1892.016667 29.22333333 44.74333333 0.004228293 0.27375385 0.178797586 -25 -4 -14.5 0.01 dme-miR-184-3p 6mer2-7 CCGTCC 2R 9178253 9178258 - 2R_9178253_9178258_- 1 0.999996655 0.999998327 2.33E-06 ltd FBtr0346635|FBtr0089932|FBtr0089933|FBtr0339369|FBtr0346636|FBtr0089931|FBtr0089934 9177862|9177862|9177862|9177862|9177862|9177862|9177862 9178433|9178433|9178433|9178433|9178433|9178433|9178433 2R - 9178235 9178282 3'utr ltd FlyBase G21289.1 AGACTTAGTGTCATCCGTATCATCCCGTCCGTCTTTATCTTTAACACC 14 9178260 0.88381296 2 12 133 0.823529412 0.669006781 0.117647059 0.142857143 0.294117647 14 1 2 14 2R:9178235-9178282 6 ltd FBtr0089934|FBtr0346636|FBtr0089931|FBtr0089933|FBtr0339369|FBtr0346635|FBtr0089932 9177862|9177862|9177862|9177862|9177862|9177862|9177862 9178433|9178433|9178433|9178433|9178433|9178433|9178433 CCGTCC 6mer2-7 dme-miR-184-3p 2R - 9178233 9178270 3'utr ltd FlyBase G16143.1 ATCCGTATCATCCCGTCCGTCTTTATCTTTAACACCCC 9 9178260 0.973576267 3 9 59 1 1.176091259 0 0.666666667 0.8 9 0 0 15 2R:9178233-9178270 6 11.5 2200 FBgn0002567 31.33333333 1.753333333 2.75 0.367021277 6.558935361 4.181818182 2 2 2 0.01 dme-miR-276a-3p 7mer-A1 GTTCCTA 2R 9186782 9186788 - 2R_9186782_9186788_- 0.823349562 0.823349562 0.823349562 0 CG8026 FBtr0302512|FBtr0088611 9186668|9186668 9186974|9188013 2R - 9186694 9186819 3'utr CG8026 FlyBase G21291.1 TGGTCTTTTCGTAGTAAGTAAAGTGATTGTTGTTCCTAAGTGTGGATCAGAATGGATTTGTGATTGAATTCAGACGAAAGTGTTACAATATACCTGTGAAATATAAGTCCATAGCCTCACTCTTGC 121 9186791 0.987379054 21 113 991 0.945205479 1.662757832 0.212328767 0.165289256 0.308219178 121 6 2 138 2R:9186694-9186819 7 CG8026 FBtr0302512|FBtr0088611 9186668|9186668 9186974|9188013 GTTCCTA 7mer-A1 dme-miR-276a-3p 2R - 9186743 9186839 3'utr CG8026 FlyBase G16145.1 AGTTGTTGCGAAGACTTATTTGGTCTTTTCGTAGTAAGTAAAGTGATTGTTGTTCCTAAGTGTGGATCAGAATGGATTTGTGATTGAATTCAGACGA 95 9186791 0.987564343 17 93 827 0.98630137 1.857332496 0.171232877 0.389473684 0.602739726 95 1 1 144 2R:9186743-9186839 7 58.5 2201 FBgn0033391 992.26 57.94 89.16 0.058956322 1.009665171 0.656123822 3 3 3 0.01 dme-miR-932-5p 7mer-A1 GAATTGA 2R 9187003 9187009 - 2R_9187003_9187009_- 0.731659037 0.731659037 0.731659037 0 CG8026 FBtr0088611 9186668 9188013 2R - 9186973 9187030 stop_codon CG8026 FlyBase G21293.1 TCCTGCTCGCCAGGCGGAAGCGAATTGAGACTAAAGAGGATGCGTCGGACGTGTGATT 48 9187005 0.838945445 4 41 158 0.962264151 1.40654018 0.283018868 0.083333333 0.169811321 48 1 1 51 2R:9186973-9187030 7 CG8026 FBtr0088611 9186668 9188013 GAATTGA 7mer-A1 dme-miR-932-5p 2R - 9186938 9187032 stop_codon CG8026 FlyBase G16146.1 TTTCCTGCTCGCCAGGCGGAAGCGAATTGAGACTAAAGAGGATGCGTCGGACGTGTGATTTTCCTTTGGTTGGATTCCTTTTAGGCTTCTAAGAT 41 9187005 0.823719942 7 39 200 0.929824561 1.72427587 0.280701754 0.317073171 0.50877193 41 4 0 53 2R:9186938-9187032 7 32.5 2202 FBgn0033391 992.26 57.94 89.16 0.032753512 0.560925095 0.364513235 -4 -4 -4 0.01 dme-miR-970-3p 6mer3-8 TCTTAT 2R 9187454 9187459 - 2R_9187454_9187459_- 1 1 1 0 CG8026 FBtr0088611|FBtr0302511 9186668|9187361 9188013|9188013 2R - 9187382 9187533 3'utr CG8026 FlyBase G21295.1 AAGGATAAACCTTGACATTTATGTAAATAAGCATAAACGCATTGTGAAACCAACTTAGTCCTACAGTGGAACAATCTTATTGAAATCAAAGAAAAGATAAGAAATGCGAAATTACTTACCCATATTAAAAGGCCACGATGGCAGACCTAAAT 29 9187454 0.918025492 11 26 144 0.842105263 1.505149978 0.078947368 0.24137931 0.421052632 29 6 0 32 2R:9187382-9187533 6 CG8026 FBtr0302511|FBtr0088611 9187361|9186668 9188013|9188013 TCTTAT 6mer3-8 dme-miR-970-3p 2R - 9187439 9187469 3'utr CG8026 FlyBase G16148.1 AGTGGAACAATCTTATTGAAATCAAAGAAAA 8 9187454 0.685546618 2 7 42 0.9 0.954242509 0.6 0.25 0.4 8 1 0 9 2R:9187439-9187469 6 7 2203 FBgn0033391 992.26 57.94 89.16 0.007054603 0.120814636 0.078510543 -5 -5 -5 0.01 dme-miR-980-5p 7mer-m8 GAAAAAC 2R 9187612 9187618 - 2R_9187612_9187618_- 0.705949576 0.705949576 0.705949576 0 CG8026 FBtr0088611|FBtr0302511 9186668|9187361 9188013|9188013 2R - 9187540 9187645 3'utr CG8026 FlyBase G21296.1 AACGGCTTGGAATTGTGTAAGCACAAAGAAAAACCAGTTACTGTTTAGTTGATACAAAATTTCGTTTTGGCAAAAAGATTCTTCATAGTTTTTGAAAATGGTTTAT 13 9187601 0.9873859 11 12 103 0.9375 1.176091259 0 0.230769231 0.375 13 1 0 15 2R:9187540-9187645 7 CG8026 FBtr0302511|FBtr0088611 9187361|9186668 9188013|9188013 GAAAAAC 7mer-m8 dme-miR-980-5p 2R - 9187511 9187642 3'utr CG8026 FlyBase G16150.1 GGCTTGGAATTGTGTAAGCACAAAGAAAAACCAGTTACTGTTTAGTTGATACAAAATTTCGTTTTGGCAAAAAGATTCTTCATAGTTTTTGAAAATGGTTTATAATTTTAAGGATAAACCTTGACATTTATG 15 9187628 0.975508554 10 14 116 0.909090909 1.301029996 0.181818182 0.333333333 0.545454545 15 2 0 20 2R:9187511-9187642 7 5 2204 FBgn0033391 992.26 57.94 89.16 0.005039002 0.086296168 0.056078959 -17 10 -3.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2R 9187765 9187770 - 2R_9187765_9187770_- 0.730949445 0.730949445 0.730949445 0 CG8026 FBtr0088611|FBtr0088611|FBtr0088611|FBtr0302511|FBtr0302511|FBtr0302511 9186668|9186668|9186668|9187361|9187361|9187361 9188013|9188013|9188013|9188013|9188013|9188013 2R - 9187750 9187807 3'utr CG8026 FlyBase G21297.1 TTGTACATCCTTCACTCCCAACTTCGAAAGTAACTGATGTGATCGGGGCGTCGTCAAA 306 9187773 0.790896844 9 289 1571 0.947674419 1.66811956 0.316860465 0.114379085 0.212209302 306 12 6 326 2R:9187750-9187807 6 CG8026 FBtr0302511|FBtr0302511|FBtr0302511|FBtr0088611|FBtr0088611|FBtr0088611 9187361|9187361|9187361|9186668|9186668|9186668 9188013|9188013|9188013|9188013|9188013|9188013 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 9187752 9187808 3'utr CG8026 FlyBase G16151.2 ATTGTACATCCTTCACTCCCAACTTCGAAAGTAACTGATGTGATCGGGGCGTCGTCA 213 9187773 0.771512385 11 196 1074 0.905198777 1.693140461 0.244648318 0.38028169 0.596330275 213 26 5 296 2R:9187752-9187808 6 252.5 2205 FBgn0033391 992.26 57.94 89.16 0.254469595 4.357956507 2.831987438 3 3 3 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 2R 9187916 9187921 - 2R_9187916_9187921_- 0.99991362 0.999956864 0.999935242 3.06E-05 CG8026 FBtr0088611|FBtr0302511 9186668|9187361 9188013|9188013 2R - 9187817 9188049 stop_codon CG8026 FlyBase G21298.1 ATGGTCATGCTGATCTGGGAGAAGCTGACCAGCTAGATGGAGTATTAGTACTAGATCATCGAATCTGGAATCTGACAGAGAATTTAAGCTAAGCACCTAGAATACACGAATCTTTCTCGTTTCCTCCGATGTGCAGCTAACAGCAGAAAATGACAAACTTATTCTGTATTATTGTTGTAACTCGATTTCGGTTTAGCCCTAGCACCTTACTTTAGCCTTAAGTGTATTCCATA 545 9187920 0.977715505 36 530 3511 0.974151858 2.303196057 0.248788368 0.111926606 0.2180937 545 14 2 603 2R:9187817-9188049 6 CG8026 FBtr0302511|FBtr0088611 9187361|9186668 9188013|9188013 ATGTGC 6mer3-8 dme-miR-305-3p 2R - 9187826 9188028 stop_codon CG8026 FlyBase G16152.1 AAGCTGACCAGCTAGATGGAGTATTAGTACTAGATCATCGAATCTGGAATCTGACAGAGAATTTAAGCTAAGCACCTAGAATACACGAATCTTTCTCGTTTCCTCCGATGTGCAGCTAACAGCAGAAAATGACAAACTTATTCTGTATTATTGTTGTAACTCGATTTCGGTTTAGCCCTAGCACCTTACTTTAGCCTTAAGTG 389 9187920 0.841531504 25 382 2529 0.98791019 2.280274774 0.27806563 0.375321337 0.580310881 389 5 2 572 2R:9187826-9188028 6 413.5 2206 FBgn0033391 992.26 57.94 89.16 0.416725455 7.136693131 4.637729924 -1 -1 -1 0.01 dme-miR-317-3p 8mer-A1 TGTGTTCA 2R 9204658 9204665 - 2R_9204658_9204665_- 0.631136783 0.631136783 0.631136783 0 CG8027 FBtr0088609 9204408 9204905 2R - 9204639 9204689 3'utr CG8027 FlyBase G21307.1 CCAGCTTTTGCAGTCGACCTGTTTTGTGTTCAGTTTCATAATATCTAAGTT 59 9204666 0.718233928 9 57 685 0.955223881 1.329058719 0.343283582 0.101694915 0.208955224 59 1 2 64 2R:9204639-9204689 8 CG8027 FBtr0088609 9204408 9204905 TGTGTTCA 8mer-A1 dme-miR-317-3p 2R - 9204640 9204685 3'utr CG8027 FlyBase G16159.1 CTTTTGCAGTCGACCTGTTTTGTGTTCAGTTTCATAATATCTAAGT 47 9204666 0.722405198 6 45 523 0.961538462 1.875061263 0.371794872 0.425531915 0.653846154 47 3 0 75 2R:9204640-9204685 8 52 2207 FBgn0033392 84.66666667 3.863333333 5.83 0.614173228 13.45987921 8.919382504 1 1 1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 9204863 9204869 - 2R_9204863_9204869_- 0.801961131 0.801961895 0.801961513 5.66E-07 CG8027 FBtr0088609|FBtr0088609|FBtr0088609 9204408|9204408|9204408 9204905|9204905|9204905 2R - 9204764 9204943 stop_codon CG8027 FlyBase G21308.1 AGGCGAAGCTGGTGAGGCGCTGTGTGCAGCGCTTGTAGGATCGATTTCGTGAAGTTCTCTCCCTTCTGCAATGTTGTGATATGTTGTGAACATTTATGTAAATTGGCCATTTCTGCAAGCGATCATAGTCAAATCTAGTTGTAGGCCATGTGTAAGGCTATTTTTCTAGTTCTTTAGGTG 57 9204871 0.841418001 22 54 535 0.945945946 1.367976785 0.135135135 0.228070175 0.405405405 57 2 2 70 2R:9204764-9204943 7 CG8027 FBtr0088609|FBtr0088609|FBtr0088609 9204408|9204408|9204408 9204905|9204905|9204905 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 9204850 9204895 3'utr CG8027 FlyBase G16162.1 GTGAAGTTCTCTCCCTTCTGCAATGTTGTGATATGTTGTGAACATT 26 9204871 0.724780626 9 25 265 0.971428571 1.531478917 0.314285714 0.269230769 0.457142857 26 1 0 34 2R:9204850-9204895 7 24 2208 FBgn0033392 84.66666667 3.863333333 5.83 0.283464567 6.212251941 4.116638079 2 2 2 0.01 dme-miR-33-5p 6mer3-8 CAATGC 2R 9209144 9209149 + 2R_9209144_9209149_+ 1 1 1 0 VhaAC45 FBtr0088588|FBtr0088587 9209104|9209104 9209655|9209774 2R + 9209115 9209163 3'utr VhaAC45 FlyBase G14308.1 ATCATCGGTTCACACCTTATTTGATTGTTCAATGCGCACTCAATATTCA 21 9209135 0.733172323 6 20 189 0.958333333 1.06069784 0.125 0.142857143 0.25 21 0 1 23 2R:9209115-9209163 6 VhaAC45 FBtr0088587|FBtr0088588 9209104|9209104 9209774|9209655 CAATGC 6mer3-8 dme-miR-33-5p 2R + 9209117 9209166 3'utr VhaAC45 FlyBase G10888.1 CATCGGTTCACACCTTATTTGATTGTTCAATGCGCACTCAATATTCATTC 17 9209135 0.680947875 8 14 152 0.727272727 1.204119983 0 0.176470588 0.363636364 17 6 0 16 2R:9209117-9209166 6 16 2209 FBgn0262515 1434.51 91.37 139.18 0.011153634 0.175112181 0.114959046 9 9 9 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA 2R 9209596 9209601 + 2R_9209596_9209601_+ 1 1 1 0 VhaAC45 FBtr0088588|FBtr0088587 9209104|9209104 9209655|9209774 2R + 9209465 9209621 3'utr VhaAC45 FlyBase G14311.1 GAGCGCGCGCGTGTGTGTGTGTGCACATGGGCAGTAAATCTAATCCGAAGTATATCTAAGTGTTTTATAGTTTCTTGTTTGGCGCAAATATGCGAGACTAATTTATGCCTCTGTATGATAGTTTGTCATTTGTGCAACCCTCCTGTTGTTCGCAGGC 20 9209609 0.985963598 14 17 148 0.92 1.361727836 0.36 0.2 0.36 20 2 0 23 2R:9209465-9209621 6 VhaAC45 FBtr0088587|FBtr0088588 9209104|9209104 9209774|9209655 GTGCAA 6mer3-8 dme-miR-92b-3p 2R + 9209569 9209614 3'utr VhaAC45 FlyBase G10891.1 ATGCCTCTGTATGATAGTTTGTCATTTGTGCAACCCTCCTGTTGTT 7 9209609 0.966486979 4 6 59 0.875 0.84509804 0.125 0.142857143 0.25 7 1 0 7 2R:9209569-9209614 6 5.5 2210 FBgn0262515 1434.51 91.37 139.18 0.003834062 0.060194812 0.039517172 -13 -13 -13 0.01 dme-miR-33-5p 7mer-m8 CAATGCA 2R 9252851 9252857 - 2R_9252851_9252857_- 0.674515173 0.674515173 0.674515173 0 Pkn FBtr0302604|FBtr0088603|FBtr0301511|FBtr0112897|FBtr0088604|FBtr0088605|FBtr0088601 9252308|9252308|9252308|9252308|9252308|9252308|9252308 9254063|9254063|9254063|9254063|9254063|9254063|9254063 2R - 9252786 9252890 3'utr Pkn FlyBase G21313.1 TGCACACCTCATGCGAATCGAAACGAGTATAAACAATGCAGATCTTCTATTGTCATTTTTATTATGATTATGCTCACAACTTGCGGCTATAATCATCGATTTAAT 21 9252844 0.927473004 10 18 153 0.92 1.06069784 0.28 0.19047619 0.32 21 1 1 23 2R:9252786-9252890 7 Pkn FBtr0112897|FBtr0301511|FBtr0088603|FBtr0302604|FBtr0088605|FBtr0088604|FBtr0088601 9252308|9252308|9252308|9252308|9252308|9252308|9252308 9254063|9254063|9254063|9254063|9254063|9254063|9254063 CAATGCA 7mer-m8 dme-miR-33-5p 2R - 9252830 9252901 3'utr Pkn FlyBase G16164.1 GATAACGATTTTGCACACCTCATGCGAATCGAAACGAGTATAAACAATGCAGATCTTCTATTGTCATTTTTA 21 9252846 0.910310884 7 19 145 0.933333333 1.146128036 0.233333333 0.333333333 0.533333333 21 1 1 28 2R:9252830-9252901 7 13 2211 FBgn0020621 844.8 19.37333333 29.6 0.015388258 0.671025465 0.439189189 -13 -11 -12 0.01 dme-miR-965-3p 6mer2-7 ACGCTT 2R 9287984 9287989 + 2R_9287984_9287989_+ 1 1 1 0 CG1968 FBtr0088596 9287961 9289026 2R + 9287963 9287998 3'utr CG1968 FlyBase G14317.1 ATATTTCCGACCAGCTGCAGAACGCTTTGGGCTACA 10 9287990 0.663981444 3 9 42 0.9 0.954242509 0.2 0 0 10 1 0 9 2R:9287963-9287998 6 CG1968 FBtr0088596 9287961 9289026 ACGCTT 6mer2-7 dme-miR-965-3p 2R + 9287970 9288005 3'utr CG1968 FlyBase G10895.1 CGACCAGCTGCAGAACGCTTTGGGCTACATAGCCGA 8 9287990 0.66718666 2 8 34 1 1 0 0.25 0.4 8 0 0 10 2R:9287970-9288005 6 9 2212 FBgn0033401 141.2733333 8.553333333 13.19 0.06370629 1.052221356 0.682335102 -6 -6 -6 0.01 dme-miR-2a-2-5p 6mer2-7 GATGAG 2R 9288514 9288519 + 2R_9288514_9288519_+ 1 0.999983177 0.999991589 1.19E-05 CG1968 FBtr0088596 9287961 9289026 2R + 9288471 9288538 3'utr CG1968 FlyBase G14319.2 TCTGCATCACATGCAAAGCTCGCTGGCTGTCTACGAATATATGGATGAGCGCGTGGAGCGGCTGCAGG 14 9288494 0.974579703 5 13 68 0.941176471 1.204119983 0.705882353 0.214285714 0.352941176 14 1 0 16 2R:9288471-9288538 6 CG1968 FBtr0088596 9287961 9289026 GATGAG 6mer2-7 dme-miR-2a-2-5p 2R + 9288480 9288598 3'utr CG1968 FlyBase G10897.1 CATGCAAAGCTCGCTGGCTGTCTACGAATATATGGATGAGCGCGTGGAGCGGCTGCAGGCGCAGTCGGATGCCCAGTTGGACACACTGACCTCCGAGCAGGCATCATCGCTGGTGGCGA 12 9288494 0.959337026 8 12 52 1 1.255272505 0.333333333 0.416666667 0.611111111 12 0 0 18 2R:9288480-9288598 6 2.5 2213 FBgn0033401 141.2733333 8.553333333 13.19 0.017696192 0.29228371 0.189537528 20 20 20 0.01 dme-miR-2b-2-5p 6mer2-7 TGAAGA 2R 9288665 9288670 + 2R_9288665_9288670_+ 1 1 1 0 CG1968 FBtr0088596 9287961 9289026 2R + 9288631 9288692 3'utr CG1968 FlyBase G14320.1 CAGAGCAATCAATCTAAAATAGAAACAAACCTGCTGAAGATCTTCATGTCCAAGATGGACGC 16 9288677 0.975950883 6 13 82 0.909090909 1.301029996 0.272727273 0.25 0.454545455 16 2 0 20 2R:9288631-9288692 6 CG1968 FBtr0088596 9287961 9289026 TGAAGA 6mer2-7 dme-miR-2b-2-5p 2R + 9288657 9288712 3'utr CG1968 FlyBase G10898.1 AAACCTGCTGAAGATCTTCATGTCCAAGATGGACGCCTTTCTGGAACTACCCGATG 12 9288676 0.976448332 6 11 73 1 1.204119983 0.4375 0.333333333 0.5 12 0 0 16 2R:9288657-9288712 6 11.5 2214 FBgn0033401 141.2733333 8.553333333 13.19 0.081402482 1.344505066 0.871872631 -12 -11 -11.5 0.01 dme-miR-8-3p 7mer-A1 AGTATTA 2R 9303113 9303119 - 2R_9303113_9303119_- 0.823349562 0.823349562 0.823349562 0 Myd88 FBtr0333000 9302821 9303893 2R - 9303117 9303160 3'utr Myd88 FlyBase G21340.1 CATCATCACATCGTCTCTTTCAATGTATCTAGAGTCTATATAGT 9 9303138 0.913632128 4 8 74 0.888888889 0.602059991 0 0 0 9 0 1 8 2R:9303117-9303160 2 Myd88 FBtr0333000 9302821 9303893 AGTATTA 7mer-A1 dme-miR-8-3p 2R - 9303112 9303148 3'utr Myd88 FlyBase G16182.1 GTCTCTTTCAATGTATCTAGAGTCTATATAGTATTAT 5 9303127 0.695731322 3 5 53 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 2R:9303112-9303148 7 1.5 2215 FBgn0033402 1078.95 50.21333333 77.45 0.001390241 0.029872544 0.019367334 19 8 13.5 0.01 dme-miR-317-5p 6mer2-7 TATCCC 2R 9396395 9396400 - 2R_9396395_9396400_- 1 1 1 0 Non1 FBtr0300649|FBtr0088554 9396263|9396358 9396478|9396478 2R - 9396386 9396421 3'utr Non1 FlyBase G21351.1 TATAAACTAAGCGTCTATCTTTATCCCTGAAAAACA 22 9396401 0.948088057 6 21 158 0.958333333 1.361727836 0.041666667 0.090909091 0.166666667 22 1 0 23 2R:9396386-9396421 6 Non1 FBtr0300649|FBtr0088554 9396263|9396358 9396478|9396478 TATCCC 6mer2-7 dme-miR-317-5p 2R - 9396384 9396413 3'utr Non1 FlyBase G16192.1 AAGCGTCTATCTTTATCCCTGAAAAACATT 25 9396401 0.623016815 5 24 175 1 1.612783857 0.170731707 0.4 0.634146341 25 0 0 41 2R:9396384-9396413 6 23 2216 FBgn0028473 3601.33 199.31 303.37 0.006386529 0.115398124 0.075815011 1 1 1 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2R 9396443 9396448 - 2R_9396443_9396448_- 1 1 1 0 Non1 FBtr0300649|FBtr0088554 9396263|9396358 9396478|9396478 2R - 9396446 9396537 stop_codon Non1 FlyBase G21352.1 AGATGCCGAAGCATTTGTTCTCCGGCAAGCGTGGAAATGGCAAGACGGATCGCCGTTAAGCGCCGCAGCCTTGGCTGGTTAAGTGATTCTAC 31 9396459 0.855264097 10 30 193 0.970588235 1.217483944 0.117647059 0.096774194 0.176470588 31 0 1 33 2R:9396446-9396537 2 Non1 FBtr0300649|FBtr0088554 9396263|9396358 9396478|9396478 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2R - 9396446 9396479 stop_codon Non1 FlyBase G16193.1 AGCGCCGCAGCCTTGGCTGGTTAAGTGATTCTAC 19 9396459 0.939739857 4 15 127 0.826086957 0.67669361 0.173913043 0.157894737 0.304347826 19 1 3 19 2R:9396446-9396479 2 16 2217 FBgn0028473 3601.33 199.31 303.37 0.004442803 0.080276955 0.052740877 11 11 11 0.01 dme-miR-184-5p 6mer3-8 TGATAA 2R 9399795 9399800 - 2R_9399795_9399800_- 1 1 1 0 CG33774 FBtr0091775 9399751 9399846 2R - 9399752 9399807 3'utr CG33774 FlyBase G21365.1 AGGATAATGATAATGCTGCTTCATTCGCAAAATAAATATGTAGTTGTACAAATCTA 11 9399786 0.947342514 8 10 81 0.933333333 1.146128036 0.066666667 0.181818182 0.4 11 1 0 14 2R:9399752-9399807 6 CG33774 FBtr0091775 9399751 9399846 TGATAA 6mer3-8 dme-miR-184-5p 2R - 9399754 9399807 3'utr CG33774 FlyBase G16207.1 AGGATAATGATAATGCTGCTTCATTCGCAAAATAAATATGTAGTTGTACAAATC 8 9399784 0.982300487 5 8 62 1 1.041392685 0 0.25 0.454545455 8 0 0 11 2R:9399754-9399807 6 8 2218 FBgn0053774 45.25333333 22.76333333 34.59666667 0.176782557 0.351442378 0.23123615 -14 -16 -15 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 9425649 9425655 + 2R_9425649_9425655_+ 0.661615511 0.661615511 0.661615511 0 prel FBtr0300293|FBtr0333003 9425641|9425641 9426107|9426107 2R + 9425603 9425689 stop_codon prel FlyBase G14324.1 TGCCTCCAAGATTGCGCAACTGTTTTCTGTCAAGAACTGAGGAACTTCTAGTCTGTACTTTTTGGAATAGATGTCGAATGGGACCGA 33 9425648 0.978537448 9 33 227 1 1.579783597 0 0.121212121 0.236842105 33 0 0 38 2R:9425603-9425689 7 prel FBtr0300293|FBtr0333003 9425641|9425641 9426107|9426107 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 9425596 9425675 stop_codon prel FlyBase G10903.1 AGAGTCATGCCTCCAAGATTGCGCAACTGTTTTCTGTCAAGAACTGAGGAACTTCTAGTCTGTACTTTTTGGAATAGATG 21 9425648 0.982486341 10 20 145 0.96969697 1.505149978 0.363636364 0.428571429 0.636363636 21 1 0 32 2R:9425596-9425675 7 22.5 2219 FBgn0033413 247.3533333 19.64666667 30.09333333 0.090962995 1.14523244 0.747673903 1 1 1 0.01 dme-bantam-3p 6mer3-8 TGATCT 2R 9425864 9425869 + 2R_9425864_9425869_+ 1 1 1 0 prel FBtr0300293|FBtr0333003 9425641|9425641 9426107|9426107 2R + 9425790 9425962 3'utr prel FlyBase G14326.1 AAACATTTATTCCAAAGCAAATCCAACTACATACTTTGCTGCATTTCATTCCGTGTGTGCGCGAATCAAACGGCTGATCTGAACGGAGACACAATTTGCTGAACACATTTCCTGCATGCTACCAAATTCTATTATTTATCGTTACTTATTTGCACTACATTATTATGTATCAT 76 9425864 0.975451329 23 74 466 0.978723404 1.662757832 0.127659574 0.210526316 0.361702128 76 1 1 92 2R:9425790-9425962 6 prel FBtr0300293|FBtr0333003 9425641|9425641 9426107|9426107 TGATCT 6mer3-8 dme-bantam-3p 2R + 9425822 9425961 3'utr prel FlyBase G10904.1 ACTTTGCTGCATTTCATTCCGTGTGTGCGCGAATCAAACGGCTGATCTGAACGGAGACACAATTTGCTGAACACATTTCCTGCATGCTACCAAATTCTATTATTTATCGTTACTTATTTGCACTACATTATTATGTATCA 62 9425865 0.972013872 14 58 341 0.928571429 1.193124598 0.238095238 0.306451613 0.488095238 62 2 4 78 2R:9425822-9425961 6 37 2220 FBgn0033413 247.3533333 19.64666667 30.09333333 0.149583592 1.883271123 1.229508197 0 -1 -0.5 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 9433367 9433372 + 2R_9433367_9433372_+ 1 1 1 0 Pdk FBtr0306807 9433272 9433952 2R + 9433315 9433415 3'utr Pdk FlyBase G14338.1 AAATAAAAAAGAAATGAGATGTGATGAGTTGAGAAATGAAGCGAACCGCCTGGCTGTGTAAAGAGTTTGCGCCACCCTGCACCAATTGAATTCAATCCAAT 829 9433365 0.961121787 16 803 3218 0.970408163 2.376120526 0.343877551 0.145958987 0.27755102 829 26 3 951 2R:9433315-9433415 6 Pdk FBtr0306807 9433272 9433952 GCTGTG 6mer2-7 dme-miR-1008-3p 2R + 9433315 9433395 3'utr Pdk FlyBase G10915.1 AAATAAAAAAGAAATGAGATGTGATGAGTTGAGAAATGAAGCGAACCGCCTGGCTGTGTAAAGAGTTTGCGCCACCCTGCA 563 9433365 0.964039765 14 545 1977 0.973193473 2.62065648 0.384615385 0.362344583 0.581585082 563 22 1 835 2R:9433315-9433395 6 669.5 2221 FBgn0017558 322.33 15.26666667 23.27333333 2.077063879 43.85371179 28.76682899 2 2 2 0.01 dme-miR-12-5p 6mer2-7 ATACTC 2R 9433770 9433775 + 2R_9433770_9433775_+ 1 1 1 0 Pdk FBtr0306807 9433272 9433952 2R + 9433750 9433863 3'utr Pdk FlyBase G14340.1 TATATACACGACAAACATTTATACTCTGAAGTAAACTGATGTTTTGAAACATTTACGAAATTAGCTTTAATTTGTGGATTTTAATTAGGCTAAAGCCCGAACTGCATGCAATGT 27 9433769 0.972947757 13 27 167 1 1.531478917 0.235294118 0.259259259 0.411764706 27 0 0 34 2R:9433750-9433863 6 Pdk FBtr0306807 9433272 9433952 ATACTC 6mer2-7 dme-miR-12-5p 2R + 9433746 9433782 3'utr Pdk FlyBase G10917.1 AACCTATATACACGACAAACATTTATACTCTGAAGTA 5 9433769 0.963316101 4 4 22 1 0.77815125 0.666666667 0.2 0.333333333 5 0 0 6 2R:9433746-9433782 6 7 2222 FBgn0017558 322.33 15.26666667 23.27333333 0.021716874 0.458515284 0.300773417 1 1 1 0.01 dme-miR-92b-3p 6mer2-7 TGCAAT 2R 9433856 9433861 + 2R_9433856_9433861_+ 1 1 1 0 Pdk FBtr0306807 9433272 9433952 2R + 9433750 9433863 3'utr Pdk FlyBase G14340.1 TATATACACGACAAACATTTATACTCTGAAGTAAACTGATGTTTTGAAACATTTACGAAATTAGCTTTAATTTGTGGATTTTAATTAGGCTAAAGCCCGAACTGCATGCAATGT 27 9433834 0.972947757 13 27 167 1 1.531478917 0.235294118 0.259259259 0.411764706 27 0 0 34 2R:9433750-9433863 6 Pdk FBtr0306807 9433272 9433952 TGCAAT 6mer2-7 dme-miR-92b-3p 2R + 9433796 9433862 3'utr Pdk FlyBase G10918.1 AAACATTTACGAAATTAGCTTTAATTTGTGGATTTTAATTAGGCTAAAGCCCGAACTGCATGCAATG 13 9433856 0.850894784 5 12 85 0.947368421 1.255272505 0.368421053 0.384615385 0.578947368 13 1 0 18 2R:9433796-9433862 6 6.5 2223 FBgn0017558 322.33 15.26666667 23.27333333 0.020165669 0.425764192 0.279289602 22 0 11 0.01 dme-miR-1003-3p 8mer-A1 ATGTGAGA 2R 9434853 9434860 - 2R_9434853_9434860_- 0.643565845 0.643565811 0.643565828 0 ced-6 FBtr0306808|FBtr0088549|FBtr0088548|FBtr0088550|FBtr0339384 9434667|9434667|9434667|9434667|9434667 9435274|9435274|9435274|9435274|9435274 2R - 9434684 9434998 3'utr ced-6 FlyBase G21372.1 AGAAACAACCGCAATGCACCTTGTTTAAACGTATCAATTTGTTGCTGTAGTTGAATAGATTAATTGATGGTCGAGTAAAGCGAATGAAAAAATGTTAACAAGTGATAAATGTGAAAATTGCTAAACAATGCTAACTGAATGTGAGAATTTTGTATAAAATAATTATAAAGACATAACCAGAAGCAAATGAATCGATTACTGTATAGAGCCGAAATACGAGGAGAATTAAAGCAAAATGAACAATATTTAATGTTATTGATGCAATATAGAGAAATATTATTATTACTATTATTATTGTGTACGTAAAGAATAAAA 201 9434864 0.976622056 49 190 1321 0.948207171 2.376576957 0.151394422 0.208955224 0.366533865 201 13 0 238 2R:9434684-9434998 8 ced-6 FBtr0339384|FBtr0088550|FBtr0088548|FBtr0088549|FBtr0306808 9434667|9434667|9434667|9434667|9434667 9435274|9435274|9435274|9435274|9435274 ATGTGAGA 8mer-A1 dme-miR-1003-3p 2R - 9434718 9435033 3'utr ced-6 FlyBase G16210.1 TGATAATAATCTGAGGTCAAGATCAAAAGAACACAAGAAACAACCGCAATGCACCTTGTTTAAACGTATCAATTTGTTGCTGTAGTTGAATAGATTAATTGATGGTCGAGTAAAGCGAATGAAAAAATGTTAACAAGTGATAAATGTGAAAATTGCTAAACAATGCTAACTGAATGTGAGAATTTTGTATAAAATAATTATAAAGACATAACCAGAAGCAAATGAATCGATTACTGTATAGAGCCGAAATACGAGGAGAATTAAAGCAAAATGAACAATATTTAATGTTATTGATGCAATATAGAGAAATATTATT 155 9434869 0.977406578 47 140 923 0.916317992 1.86332286 0.209205021 0.393548387 0.606694561 155 18 2 219 2R:9434718-9435033 8 67.5 2224 FBgn0029092 3414.266667 169.59 258.2733333 0.019769985 0.398018751 0.261351023 4 9 6.5 0.01 dme-miR-277-3p 6mer3-8 TGCATT 2R 9435165 9435170 - 2R_9435165_9435170_- 1 1 1 0 ced-6 FBtr0306808|FBtr0088549|FBtr0088548|FBtr0088550|FBtr0339384 9434667|9434667|9434667|9434667|9434667 9435274|9435274|9435274|9435274|9435274 2R - 9435000 9435211 3'utr ced-6 FlyBase G21373.1 TTTGTCTCATCGTTTATCCTTCTATGTTTCTCCGATTCGCATGCATTCCAATCCAATTGCAATTCGATTTATTTAATGTGTATTATTGTTTATATATTGTATTGTATTTATTATCATTGATTTTTTGTCGATTTTATATTGCATATTATGAATTCTACTATTATTATAATTATAAATATGATAATAATCTGAGGTCAAGATCAAAAGAACAC 146 9435187 0.77173972 42 138 1587 0.961956522 2.247973266 0.119565217 0.212328767 0.375 146 7 0 177 2R:9435000-9435211 6 ced-6 FBtr0339384|FBtr0088550|FBtr0088548|FBtr0088549|FBtr0306808 9434667|9434667|9434667|9434667|9434667 9435274|9435274|9435274|9435274|9435274 TGCATT 6mer3-8 dme-miR-277-3p 2R - 9435041 9435337 stop_codon ced-6 FlyBase G16211.1 AAGCAAAATCAGCTTAACCTTGACGACTTCTCGCTGGAGAGTTTGGATCCCCTGCGAAAGTAGAGCGGTGCTACCAAGGCCATTTTCACACTTCAACATGATTGAAACTTTATGACATCCCAAAAGTTTGTCTCATCGTTTATCCTTCTATGTTTCTCCGATTCGCATGCATTCCAATCCAATTGCAATTCGATTTATTTAATGTGTATTATTGTTTATATATTGTATTGTATTTATTATCATTGATTTTTTGTCGATTTTATATTGCATATTATGAATTCTACTATTATTATAATT 164 9435187 0.859349793 57 151 1487 0.917695473 1.570153613 0.238683128 0.347560976 0.559670782 164 15 5 223 2R:9435041-9435337 6 23 2225 FBgn0029092 3414.266667 169.59 258.2733333 0.006736439 0.135621204 0.089052941 17 17 17 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 9478158 9478164 + 2R_9478158_9478164_+ 0.661615511 0.661615511 0.661615511 0 Camta FBtr0339381 9477617 9480076 2R + 9478117 9478210 3'utr Camta FlyBase G14347.1 ATAGTTACATTTGTATATAGATATTGCCTAACTAACTAAATTCTAGTCTATTTTAACGTACTACCAAGCTCTGCGATGCGACTAAGCTTGTCTC 52 9478157 0.986191193 11 51 435 0.984848485 1.812913357 0.03030303 0.211538462 0.378787879 52 1 0 65 2R:9478117-9478210 7 Camta FBtr0339381 9477617 9480076 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 9478144 9478199 3'utr Camta FlyBase G10923.1 CTAACTAACTAAATTCTAGTCTATTTTAACGTACTACCAAGCTCTGCGATGCGACT 35 9478157 0.877909453 4 35 240 1 1.707570176 0.019607843 0.314285714 0.529411765 35 0 0 51 2R:9478144-9478199 7 31 2226 FBgn0259234 576.11 9.96 15.38666667 0.053809168 3.112449799 2.014731369 1 1 1 0.01 dme-miR-184-3p 8mer-A1 TCCGTCCA 2R 9478755 9478762 + 2R_9478755_9478762_+ 0.631136385 0.631136385 0.631136385 0 Camta FBtr0339381 9477617 9480076 2R + 9478746 9478789 3'utr Camta FlyBase G14349.1 TTATTTTTGTCCGTCCACATTGTTAGCTTTCATAACATACCAAC 6 9478751 0.990542169 4 4 50 0.875 0.84509804 0.25 0.166666667 0.375 6 1 0 7 2R:9478746-9478789 8 Camta FBtr0339381 9477617 9480076 TCCGTCCA 8mer-A1 dme-miR-184-3p 2R + 9478743 9478780 3'utr Camta FlyBase G10924.1 AAATTATTTTTGTCCGTCCACATTGTTAGCTTTCATAA 6 9478751 0.670195448 4 5 63 1 1 0.2 0.5 0.7 6 0 0 10 2R:9478743-9478780 8 5 2227 FBgn0259234 576.11 9.96 15.38666667 0.008678898 0.502008032 0.324956672 4 4 4 0.01 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2R 9566488 9566493 - 2R_9566488_9566493_- 1 1 1 0 Not1 FBtr0304957 9566144 9567977 2R - 9566272 9566682 3'utr Not1 FlyBase G21396.2 TCGAATCTAAATTCATTATCCTACGTTAGGCAATTTGCGAGTTATGTATGTACATGTACGTGTTATTCAGTCCCTCATTCACTCGACACTCAGCAGCCTGCAGCAAAGCAACTCTATTAGTTTTTAGTCTACCGCAAATGAACATTCATTGTATTTACGCAAGTCAAATCTATTTTGAATTAAACTGAATTGAAGCCTGAAGCCGAGCAAAGTGCACATGTAGAAAGCGAGAGAGAGGAGAGTAGAGAGTAGATGATGGAAGAAGGGCTAGCTTTTTAGCCAAAGGCCCAACTCATTTATAGACTAATTCCGTTTGCAATGGCTAAGAAGTATGTATATGATGGATGTACAGACATTCGTTCACCGATCGACCGACACATTCATAAACGAAAGCTGCGACACAAGAAACCA 316 9566493 0.958071144 54 295 1586 0.931232092 2.034762106 0.140401146 0.091772152 0.17765043 316 22 2 325 2R:9566272-9566682 6 Not1 FBtr0304957 9566144 9567977 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2R - 9566410 9566513 3'utr Not1 FlyBase G16233.1 CTATTTTGAATTAAACTGAATTGAAGCCTGAAGCCGAGCAAAGTGCACATGTAGAAAGCGAGAGAGAGGAGAGTAGAGAGTAGATGATGGAAGAAGGGCTAGCT 110 9566493 0.742294772 10 104 419 0.961538462 1.698970004 0.205128205 0.336363636 0.532051282 110 4 2 150 2R:9566410-9566513 6 116.5 2228 FBgn0085436 10306.14667 124.2833333 191.6566667 0.011303934 0.937374279 0.607857801 0 0 0 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 2R 9566954 9566959 - 2R_9566954_9566959_- 1 1 1 0 Not1 FBtr0304957 9566144 9567977 2R - 9566889 9567095 3'utr Not1 FlyBase G21398.1 AGCAGCCACTGCAACATTAACCAGAACCAACCAATGTTTGATCTTCTTATACGCAATATAAGCGATACGTTTTGTTTTAACCTACATTATTTTATGAACTGATTATTAACTGAAATGGAAATACATTGAACACATCTAGCTTGTTAAACGTATAATCGATCCTCCATGTAAAGATAAACGCTGTTAGAATCAGATAGATGAGTGAAT 152 9566961 0.875676875 42 137 1205 0.90052356 1.457377197 0.120418848 0.230263158 0.387434555 152 14 5 172 2R:9566889-9567095 6 Not1 FBtr0304957 9566144 9567977 TAGCTT 6mer3-8 dme-miR-79-3p 2R - 9566939 9566974 3'utr Not1 FlyBase G16237.2 TACATTGAACACATCTAGCTTGTTAAACGTATAATC 15 9566961 0.839258015 3 12 101 0.95 1.278753601 0.1 0.333333333 0.5 15 1 0 19 2R:9566939-9566974 6 20 2229 FBgn0085436 10306.14667 124.2833333 191.6566667 0.001940589 0.160922623 0.104353271 2 2 2 0.01 dme-bantam-3p 6mer3-8 TGATCT 2R 9567052 9567057 - 2R_9567052_9567057_- 0.999797908 0.999999989 0.999898948 0.000142906 Not1 FBtr0304957 9566144 9567977 2R - 9566889 9567095 3'utr Not1 FlyBase G21398.1 AGCAGCCACTGCAACATTAACCAGAACCAACCAATGTTTGATCTTCTTATACGCAATATAAGCGATACGTTTTGTTTTAACCTACATTATTTTATGAACTGATTATTAACTGAAATGGAAATACATTGAACACATCTAGCTTGTTAAACGTATAATCGATCCTCCATGTAAAGATAAACGCTGTTAGAATCAGATAGATGAGTGAAT 152 9567049 0.875676875 42 137 1205 0.90052356 1.457377197 0.120418848 0.230263158 0.387434555 152 14 5 172 2R:9566889-9567095 6 Not1 FBtr0304957 9566144 9567977 TGATCT 6mer3-8 dme-bantam-3p 2R - 9567018 9567092 3'utr Not1 FlyBase G16239.1 AGCCACTGCAACATTAACCAGAACCAACCAATGTTTGATCTTCTTATACGCAATATAAGCGATACGTTTTGTTTT 56 9567058 0.934499158 12 54 454 0.9625 1.886490725 0.0625 0.267857143 0.4875 56 3 0 77 2R:9567018-9567092 6 54 2230 FBgn0085436 10306.14667 124.2833333 191.6566667 0.005239592 0.434491082 0.281753831 -8 1 -3.5 0.01 dme-miR-2a-2-5p 7mer-m1 GATGAGG 2R 9567289 9567295 - 2R_9567289_9567295_- 0.825582362 0.825582373 0.825582368 0 Not1 FBtr0304957 9566144 9567977 2R - 9567239 9567348 3'utr Not1 FlyBase G21400.1 CAAACCTACTCTCAACGCCGCTGAGAGCGATATTTATAGACGGTGAGCATGAGGATGAGGAGAGGAGGAGAAGGAGAAGCCGAGCAGAATGTTGAAAAGATCCTCAAGTC 18 9567313 0.934861369 11 18 65 1 1.278753601 0.473684211 0.055555556 0.105263158 18 0 0 19 2R:9567239-9567348 7 Not1 FBtr0304957 9566144 9567977 GATGAGG 7mer-m1 dme-miR-2a-2-5p 2R - 9567275 9567313 3'utr Not1 FlyBase G16240.1 ATAGACGGTGAGCATGAGGATGAGGAGAGGAGGAGAAGG 5 9567299 0.868858911 3 4 11 0.7 0.84509804 0 0.6 0.8 5 3 0 7 2R:9567275-9567313 7 6 2231 FBgn0085436 10306.14667 124.2833333 191.6566667 0.000582177 0.048276787 0.031305981 18 4 11 0.01 dme-miR-980-3p 6mer3-8 GGCAGC 2R 9567902 9567907 - 2R_9567902_9567907_- 1 1 1 0 Not1 FBtr0339394|FBtr0112672|FBtr0112673|FBtr0112674|FBtr0304957 9567512|9567512|9567512|9567512|9566144 9567977|9567977|9567977|9567977|9567977 2R - 9567892 9567930 3'utr Not1 FlyBase G21404.1 CAGACGCAGGCAGTAGCTGCCTGGGCAGCACACCACCAC 11 9567912 0.799303279 3 11 22 1 1.079181246 0.416666667 0.090909091 0.166666667 11 0 0 12 2R:9567892-9567930 6 Not1 FBtr0112672|FBtr0112673|FBtr0112674|FBtr0304957|FBtr0339394 9567512|9567512|9567512|9566144|9567512 9567977|9567977|9567977|9567977|9567977 GGCAGC 6mer3-8 dme-miR-980-3p 2R - 9567901 9567931 3'utr Not1 FlyBase G16244.1 CCAGACGCAGGCAGTAGCTGCCTGGGCAGCA 6 9567910 0.7967343 2 6 12 1 0.954242509 0.111111111 0.333333333 0.555555556 6 0 0 9 2R:9567901-9567931 6 8.5 2232 FBgn0085436 10306.14667 124.2833333 191.6566667 0.000824751 0.068392115 0.04435014 5 3 4 0.01 dme-miR-12-5p 6mer2-7 ATACTC 2R 9592424 9592429 + 2R_9592424_9592429_+ 1 1 1 0 Map60 FBtr0088530 9592414 9592744 2R + 9592373 9592472 stop_codon Map60 FlyBase G14377.1 GCGCGCCATCCTCGATGTGCAGAGCGACGAACTGGAGCAGTAGACCGACTGATACTCGCAATTTAAATGATTACTCAGCTTACTTATTAGACAAACTAAA 199 9592440 0.729808618 12 188 1148 0.946280992 1.757775491 0.02892562 0.201005025 0.342975207 199 10 3 229 2R:9592373-9592472 6 Map60 FBtr0088530 9592414 9592744 ATACTC 6mer2-7 dme-miR-12-5p 2R + 9592358 9592470 stop_codon Map60 FlyBase G10943.1 GGAGCTGTCCATCTTGCGCGCCATCCTCGATGTGCAGAGCGACGAACTGGAGCAGTAGACCGACTGATACTCGCAATTTAAATGATTACTCAGCTTACTTATTAGACAAACTA 124 9592423 0.970740122 15 117 674 0.956043956 1.763427994 0.098901099 0.338709677 0.549450549 124 6 2 174 2R:9592358-9592470 6 107.5 2233 FBgn0010342 1158.76 77.84 119.11 0.092771583 1.381038027 0.902527076 -16 1 -7.5 0.01 dme-miR-305-3p 7mer-m1 TGTGCCG 2R 9592554 9592560 + 2R_9592554_9592560_+ 0.825582373 0.825582373 0.825582373 0 Map60 FBtr0088530 9592414 9592744 2R + 9592516 9592575 3'utr Map60 FlyBase G14378.1 TATCGTATTATTTTTTCCGTGTTCAAACGTCTGCGTTCTGTGCCGCCCACTTGTAAAATG 59 9592556 0.982674582 8 55 412 0.924242424 1.183269844 0.333333333 0.084745763 0.181818182 59 2 3 61 2R:9592516-9592575 7 Map60 FBtr0088530 9592414 9592744 TGTGCCG 7mer-m1 dme-miR-305-3p 2R + 9592528 9592579 3'utr Map60 FlyBase G10944.1 TTTTCCGTGTTCAAACGTCTGCGTTCTGTGCCGCCCACTTGTAAAATGTATT 56 9592555 0.783456265 9 50 383 0.840909091 1.392110465 0.238636364 0.392857143 0.613636364 56 12 2 74 2R:9592528-9592579 7 55 2234 FBgn0010342 1158.76 77.84 119.11 0.047464531 0.706577595 0.461758039 -2 -1 -1.5 0.01 dme-miR-317-3p 7mer-A1 GTGTTCA 2R 9592600 9592606 + 2R_9592600_9592606_+ 0.823349562 0.823349562 0.823349562 0 Map60 FBtr0088530 9592414 9592744 2R + 9592586 9592621 3'utr Map60 FlyBase G14379.1 CAGTTCTGGTATGAGTGTTCATAGCATTTACGCATG 12 9592597 0.805680015 3 12 103 1 1.113943352 0.307692308 0.083333333 0.153846154 12 0 0 13 2R:9592586-9592621 7 Map60 FBtr0088530 9592414 9592744 GTGTTCA 7mer-A1 dme-miR-317-3p 2R + 9592585 9592619 3'utr Map60 FlyBase G10945.1 ACAGTTCTGGTATGAGTGTTCATAGCATTTACGCA 6 9592596 0.714644962 3 4 42 0.6 0.954242509 0.133333333 1 1 6 6 0 9 2R:9592585-9592619 7 8.5 2235 FBgn0010342 1158.76 77.84 119.11 0.007335428 0.109198356 0.071362606 3 4 3.5 0.01 dme-miR-1006-3p 7mer-m8 CGAATTT 2R 9592667 9592673 + 2R_9592667_9592673_+ 0.661614704 0.661607629 0.661611166 5.02E-06 Map60 FBtr0088530 9592414 9592744 2R + 9592642 9592709 3'utr Map60 FlyBase G14380.1 AATGTATTTCTAATATTTGAGATTTCGAATTTGTCCCTATTTAAGGTTGAATATGCTACTTGATTTTA 13 9592694 0.989261666 7 12 127 0.941176471 1.204119983 0.058823529 0.230769231 0.411764706 13 1 0 16 2R:9592642-9592709 7 Map60 FBtr0088530 9592414 9592744 CGAATTT 7mer-m8 dme-miR-1006-3p 2R + 9592643 9592713 3'utr Map60 FlyBase G10945.2 ATGTATTTCTAATATTTGAGATTTCGAATTTGTCCCTATTTAAGGTTGAATATGCTACTTGATTTTAAAAT 11 9592693 0.989272958 10 10 91 0.882352941 1.176091259 0 0.363636364 0.588235294 11 2 0 15 2R:9592643-9592713 7 5.5 2236 FBgn0010342 1158.76 77.84 119.11 0.004746453 0.07065776 0.046175804 -27 -26 -26.5 0.01 dme-miR-968-5p 6mer2-7 CTACTT 2R 9592697 9592702 + 2R_9592697_9592702_+ 0.989636345 0.536598219 0.763117282 0.320346313 Map60 FBtr0088530 9592414 9592744 2R + 9592642 9592709 3'utr Map60 FlyBase G14380.1 AATGTATTTCTAATATTTGAGATTTCGAATTTGTCCCTATTTAAGGTTGAATATGCTACTTGATTTTA 13 9592694 0.989261666 7 12 127 0.941176471 1.204119983 0.058823529 0.230769231 0.411764706 13 1 0 16 2R:9592642-9592709 6 Map60 FBtr0088530 9592414 9592744 CTACTT 6mer3-8 dme-miR-1002-5p 2R + 9592643 9592713 3'utr Map60 FlyBase G10945.2 ATGTATTTCTAATATTTGAGATTTCGAATTTGTCCCTATTTAAGGTTGAATATGCTACTTGATTTTAAAAT 11 9592693 0.989272958 10 10 91 0.882352941 1.176091259 0 0.363636364 0.588235294 11 2 0 15 2R:9592643-9592713 6 6 2237 FBgn0010342 1158.76 77.84 119.11 0.005177949 0.077081192 0.050373604 3 4 3.5 0.01 dme-miR-33-5p 6mer2-7 AATGCA 2R 9605311 9605316 + 2R_9605311_9605316_+ 1 1 1 0 CG1902 FBtr0088531|FBtr0088532 9604941|9604941 9605624|9605624 2R + 9605263 9605331 3'utr CG1902 FlyBase G14388.2 TACACATTCTAACGTCCGGTCGAACGATTCATTCTACCATGATCCCATAATGCATTTTCATGATGAAAT 16 9605310 0.848544397 7 14 91 0.882352941 1.176091259 0.235294118 0.0625 0.117647059 16 2 0 15 2R:9605263-9605331 6 CG1902 FBtr0088531|FBtr0088532 9604941|9604941 9605624|9605624 AATGCA 6mer2-7 dme-miR-33-5p 2R + 9605288 9605314 3'utr CG1902 FlyBase G10949.1 GATTCATTCTACCATGATCCCATAATG 7 9605310 0.695002709 2 5 40 0.888888889 0.903089987 0.333333333 0.285714286 0.444444444 7 1 0 8 2R:9605288-9605314 4 8 2238 FBgn0033434 795.9833333 54.22333333 82.71333333 0.010050462 0.14753796 0.096719594 1 1 1 0.01 dme-miR-190-5p 6mer3-8 ACATAT 2R 9605487 9605492 + 2R_9605487_9605492_+ 1 1 1 0 CG1902 FBtr0088531|FBtr0088532 9604941|9604941 9605624|9605624 2R + 9605463 9605520 3'utr CG1902 FlyBase G14389.1 AATTTTTGATACTAGTTTACACATACATATACATGCATCTCTATATTTATGGATAATA 11 9605496 0.984291836 3 11 94 1 1.146128036 0 0.272727273 0.428571429 11 0 0 14 2R:9605463-9605520 6 CG1902 FBtr0088531|FBtr0088532 9604941|9604941 9605624|9605624 ACATAT 6mer3-8 dme-miR-190-5p 2R + 9605483 9605520 3'utr CG1902 FlyBase G10951.1 ACATACATATACATGCATCTCTATATTTATGGATAATA 8 9605496 0.757704419 4 8 64 1 0.954242509 0 0.125 0.222222222 8 0 0 9 2R:9605483-9605520 6 8.5 2239 FBgn0033434 795.9833333 54.22333333 82.71333333 0.010678616 0.156759083 0.102764568 -9 -9 -9 0.01 dme-miR-8-3p 6mer2-7 AGTATT 2R 9715158 9715163 + 2R_9715158_9715163_+ 1 1 1 0 dap FBtr0088469 9715082 9716256 2R + 9715072 9715164 stop_codon dap FlyBase G14408.1 CGCCACAACTAATGCTCCAGATTCGCTGGCCAACCCACCGAATTGCAATTTGTAATTTTATTTTTTACAAGCCACTGCGATTGTGTAGTATTT 29 9715153 0.777688983 9 27 179 0.942857143 1.217483944 0.2 0.172413793 0.314285714 29 1 1 33 2R:9715072-9715164 6 dap FBtr0088469 9715082 9716256 AGTATT 6mer2-7 dme-miR-8-3p 2R + 9715134 9715164 3'utr dap FlyBase G10959.1 TTTTACAAGCCACTGCGATTGTGTAGTATTT 18 9715153 0.717407267 3 16 119 0.9 1.130333768 0.133333333 0.555555556 0.733333333 18 2 1 27 2R:9715134-9715164 6 11.5 2240 FBgn0010316 804.5033333 38.63 59.20333333 0.014294534 0.297696091 0.194245819 5 5 5 0.01 dme-miR-988-3p 6mer2-7 CAAGGG 2R 9715199 9715204 + 2R_9715199_9715204_+ 0.806217485 0.840680283 0.823448884 0.02436888 dap FBtr0088469 9715082 9716256 2R + 9715179 9715233 3'utr dap FlyBase G14409.1 ACGAACCTTTTTATGCAGTGCAAGGGCGACAGTTGCGAATATTAATCGTTAGTCT 35 9715211 0.861572698 9 34 177 1 1.62324929 0.071428571 0.171428571 0.30952381 35 0 0 42 2R:9715179-9715233 6 dap FBtr0088469 9715082 9716256 CAAGGG 6mer2-7 dme-miR-988-3p 2R + 9715184 9715417 3'utr dap FlyBase G10960.1 CCTTTTTATGCAGTGCAAGGGCGACAGTTGCGAATATTAATCGTTAGTCTTCAACTACTCGTAACCAGTAATTAGTTGTAAGTCAACCAGTAAGCTCGAGCTAAATGAAACTTTTTAGATTTCTCTAGTGAGAAATGCCATAAACTAAGTGATTAGTTCTTAACAACAAACAACTATTGAACAAGAAGAGAGAGACCGCAAGCTAAATGGAATTAGTCTTAACTATCTTGAAGC 58 9715211 0.980317788 26 51 362 0.886075949 1.84509804 0.075949367 0.344827586 0.518987342 58 9 0 70 2R:9715184-9715417 6 22.5 2241 FBgn0010316 804.5033333 38.63 59.20333333 0.027967566 0.582448874 0.380046169 -12 -12 -12 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2R 9715307 9715312 + 2R_9715307_9715312_+ 1 1 1 0 dap FBtr0088469 9715082 9716256 2R + 9715249 9715409 3'utr dap FlyBase G14410.1 CAGTAATTAGTTGTAAGTCAACCAGTAAGCTCGAGCTAAATGAAACTTTTTAGATTTCTCTAGTGAGAAATGCCATAAACTAAGTGATTAGTTCTTAACAACAAACAACTATTGAACAAGAAGAGAGAGACCGCAAGCTAAATGGAATTAGTCTTAACTAT 58 9715304 0.970822335 21 44 346 0.757142857 1.72427587 0.171428571 0.189655172 0.328571429 58 17 0 53 2R:9715249-9715409 6 dap FBtr0088469 9715082 9716256 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 9715184 9715417 3'utr dap FlyBase G10960.1 CCTTTTTATGCAGTGCAAGGGCGACAGTTGCGAATATTAATCGTTAGTCTTCAACTACTCGTAACCAGTAATTAGTTGTAAGTCAACCAGTAAGCTCGAGCTAAATGAAACTTTTTAGATTTCTCTAGTGAGAAATGCCATAAACTAAGTGATTAGTTCTTAACAACAAACAACTATTGAACAAGAAGAGAGAGACCGCAAGCTAAATGGAATTAGTCTTAACTATCTTGAAGC 58 9715297 0.980317788 26 51 362 0.886075949 1.84509804 0.075949367 0.344827586 0.518987342 58 9 0 70 2R:9715184-9715417 6 14.5 2242 FBgn0010316 804.5033333 38.63 59.20333333 0.018023542 0.375355941 0.244918642 3 10 6.5 0.01 dme-bantam-3p 7mer-m8 TGATCTC 2R 9715858 9715864 + 2R_9715858_9715864_+ 0.661615243 0.661615243 0.661615243 0 dap FBtr0088469 9715082 9716256 2R + 9715780 9715955 3'utr dap FlyBase G14412.1 TGAATGCCGCCGAATGGACACAAATTGTCGCGCTCTCATTTCTTAACCAGTGCTAAAAATGTCTTTTATGATTTGCTATGATCTCTGGGCAAATTATGAAAACAATTTTGCCTGAAACTATCATGTACAAAAACTAGATTATTATACATACTATACACATAGGCAGAGCCTATTCT 1243 9715858 0.984773314 31 1202 9666 0.966003849 1.922552467 0.050032072 0.201930813 0.363694676 1243 36 17 1506 2R:9715780-9715955 7 dap FBtr0088469 9715082 9716256 TGATCTC 7mer-m8 dme-bantam-3p 2R + 9715780 9715926 3'utr dap FlyBase G10962.1 TGAATGCCGCCGAATGGACACAAATTGTCGCGCTCTCATTTCTTAACCAGTGCTAAAAATGTCTTTTATGATTTGCTATGATCTCTGGGCAAATTATGAAAACAATTTTGCCTGAAACTATCATGTACAAAAACTAGATTATTATAC 818 9715858 0.941397623 28 782 6291 0.955028618 2.026050158 0.061324612 0.376528117 0.582992641 818 45 10 1168 2R:9715780-9715926 7 930 2243 FBgn0010316 804.5033333 38.63 59.20333333 1.155992724 24.07455346 15.70857497 0 0 0 0.01 dme-miR-8-3p 6mer2-7 AGTATT 2R 9716011 9716016 + 2R_9716011_9716016_+ 1 1 1 0 dap FBtr0088469 9715082 9716256 2R + 9715986 9716053 3'utr dap FlyBase G14413.1 AAGGCCTAACTAAGAACAAATCCAAAGTATTCTCCTAATATTTATATGTATAGACACTCTATGTATAA 30 9716014 0.942748006 7 29 168 0.96875 1.491361694 0.03125 0.066666667 0.125 30 1 0 31 2R:9715986-9716053 6 dap FBtr0088469 9715082 9716256 AGTATT 6mer2-7 dme-miR-8-3p 2R + 9715982 9716029 3'utr dap FlyBase G10963.1 TTGTAAGGCCTAACTAAGAACAAATCCAAAGTATTCTCCTAATATTTA 21 9716014 0.968472255 7 19 106 0.862068966 0.920818754 0 0.285714286 0.482758621 21 2 2 25 2R:9715982-9716029 6 21.5 2244 FBgn0010316 804.5033333 38.63 59.20333333 0.026724563 0.556562257 0.363155228 -3 -3 -3 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2R 9845106 9845112 + 2R_9845106_9845112_+ 0.823349562 0.823349562 0.823349562 0 CG1667 FBtr0345019|FBtr0345020 9845083|9845083 9845512|9845512 2R + 9845001 9845170 stop_codon CG1667 FlyBase G14436.1 AAGGGCAACCTGGTGGATGTTGGCGAATTGCTTGTAGCTCATATGCAAAACAAAACCAAAACTATTGACGAAATTTCCAACTAAGACTTGAAATCAAAAACGATTCCAAAGATTACGTTTTTTAATAATATATATCTATATATTGTAGTAATACCAAATTATTCTAGTTT 156 9845104 0.857336545 20 148 830 0.952631579 1.78055732 0.036842105 0.198717949 0.342105263 156 7 2 181 2R:9845001-9845170 7 CG1667 FBtr0345019|FBtr0345020 9845083|9845083 9845512|9845512 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 9844999 9845127 stop_codon CG1667 FlyBase G10980.1 GCAAGGGCAACCTGGTGGATGTTGGCGAATTGCTTGTAGCTCATATGCAAAACAAAACCAAAACTATTGACGAAATTTCCAACTAAGACTTGAAATCAAAAACGATTCCAAAGATTACGTTTTTTAATA 107 9845104 0.95303902 15 105 488 0.97515528 2.195899652 0.043478261 0.345794393 0.565217391 107 4 0 157 2R:9844999-9845127 7 83 2245 FBgn0033453 439.85 39.39 60.12 0.188700693 2.10713379 1.380572189 2 2 2 0.01 dme-miR-304-5p 6mer2-7 GAGATT 2R 9850774 9850779 - 2R_9850774_9850779_- 1 1 1 0 CG1516 FBtr0088457|FBtr0088460|FBtr0088459|FBtr0088454|FBtr0088455|FBtr0088462|FBtr0088458|FBtr0088461|FBtr0088456|FBtr0300850 9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701 9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136 2R - 9850753 9850803 3'utr CG1516 FlyBase G21511.1 TTTTAATTCGCAAACACCTGTGTCGAGATTCCCCCTCTAGTAAATACGTAA 26 9850775 0.768568444 5 25 162 0.972222222 1.544068044 0.361111111 0.307692308 0.5 26 1 0 35 2R:9850753-9850803 6 CG1516 FBtr0088456|FBtr0300850|FBtr0088455|FBtr0088462|FBtr0088458|FBtr0088461|FBtr0088459|FBtr0088454|FBtr0088457|FBtr0088460 9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701 9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136 GAGATT 6mer2-7 dme-miR-304-5p 2R - 9850750 9850796 3'utr CG1516 FlyBase G16335.1 TCGCAAACACCTGTGTCGAGATTCCCCCTCTAGTAAATACGTAAGTG 17 9850775 0.962663073 4 17 99 1 1.397940009 0.12 0.352941176 0.56 17 0 0 25 2R:9850750-9850796 6 20.5 2246 FBgn0027580 357.3333333 9.89 15.28666667 0.057369403 2.072800809 1.341037942 -4 -4 -4 0.01 dme-miR-184-5p 6mer3-8 TGATAA 2R 9851055 9851060 - 2R_9851055_9851060_- 1 1 1 0 CG1516 FBtr0088457|FBtr0088460|FBtr0088459|FBtr0088454|FBtr0088455|FBtr0088462|FBtr0088458|FBtr0088461|FBtr0088456|FBtr0300850 9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701 9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136 2R - 9850989 9851089 3'utr CG1516 FlyBase G21513.1 ACACCCAATGTAAAATTAAGTGAAAACAGTGATAATCTTAGGGACTCTGTCAGTTCGATTGATCATAAAACTGTCCAAAGTCGCCTGTGTCTATTTTTATA 25 9851069 0.98500596 9 20 167 0.821428571 1.361727836 0.071428571 0.166666667 0.285714286 24 5 0 23 2R:9850989-9851089 6 CG1516 FBtr0088456|FBtr0300850|FBtr0088455|FBtr0088462|FBtr0088458|FBtr0088461|FBtr0088459|FBtr0088454|FBtr0088457|FBtr0088460 9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701 9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136 TGATAA 6mer3-8 dme-miR-184-5p 2R - 9851051 9851103 3'utr CG1516 FlyBase G16337.2 AGCTGCCACCGCACACACCCAATGTAAAATTAAGTGAAAACAGTGATAATCTT 14 9851069 0.975918626 5 12 72 0.9 1.255272505 0.05 0.357142857 0.55 14 2 0 18 2R:9851051-9851103 6 14.5 2247 FBgn0027580 357.3333333 9.89 15.28666667 0.040578358 1.466127401 0.948539032 9 9 9 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2R 9866617 9866623 + 2R_9866617_9866623_+ 0.823349562 0.823349562 0.823349562 0 Ntmt FBtr0088375 9866533 9866684 2R + 9866601 9866652 3'utr Ntmt FlyBase G14449.1 AATGTCACATTACTAGCTAGTCACTTCAAATTGTAGCGTTCTAATCAACGAA 11 9866639 0.855758552 5 10 69 0.923076923 1.079181246 0.076923077 0.181818182 0.307692308 11 1 0 12 2R:9866601-9866652 7 Ntmt FBtr0088375 9866533 9866684 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R + 9866601 9866653 3'utr Ntmt FlyBase G10987.1 AATGTCACATTACTAGCTAGTCACTTCAAATTGTAGCGTTCTAATCAACGAAT 6 9866639 0.984844175 3 6 45 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2R:9866601-9866653 7 4 2248 FBgn0033457 259 31.11666667 48.00666667 0.015444015 0.128548473 0.083321761 -22 -22 -22 0.01 dme-miR-277-3p 6mer3-8 TGCATT 2R 9876442 9876447 - 2R_9876442_9876447_- 1 1 1 0 Sec24AB FBtr0339406|FBtr0088451|FBtr0339407 9876230|9876230|9876230 9877125|9877125|9877125 2R - 9876409 9876517 3'utr Sec24AB FlyBase G21535.1 GAAAGGCGTTTTGTTGCACTGTAGTTAGCGAACTTATTTCAAACGTATGTACGGATTTGGTATTGTGTATTGCATTCATTGGACTGCTAGGCAGTGAATGTCTTAAGCT 69 9876438 0.732930427 18 68 583 0.986666667 1.568201724 0.24 0.072463768 0.146666667 69 0 1 74 2R:9876409-9876517 6 Sec24AB FBtr0339407|FBtr0088451|FBtr0339406 9876230|9876230|9876230 9877125|9877125|9877125 TGCATT 6mer3-8 dme-miR-277-3p 2R - 9876291 9876548 3'utr Sec24AB FlyBase G16349.1 AGAGAAATCTATATTTATTTATAAGTGTAAGGAAAGGCGTTTTGTTGCACTGTAGTTAGCGAACTTATTTCAAACGTATGTACGGATTTGGTATTGTGTATTGCATTCATTGGACTGCTAGGCAGTGAATGTCTTAAGCTTAGAAGGAATATTATACTGTATCAATAAAGAGACCCCATCCCTGTACCTCAGGTGGCGCAGTTGTCGTTCTTTGAGTGGGCTAACTAATCGAAAAACCATATACAAATACTGTACCAT 71 9876438 0.984972783 17 68 552 0.973451327 2.041392685 0.17699115 0.408450704 0.628318584 71 3 0 110 2R:9876291-9876548 6 48.5 2249 FBgn0033460 661.8766667 16.61 25.35 0.073276492 2.919927754 1.91321499 -9 -9 -9 0.01 dme-miR-1012-3p 6mer2-7 TGACTA 2R 9877042 9877047 - 2R_9877042_9877047_- 1 1 1 0 Sec24AB FBtr0339406|FBtr0088451|FBtr0339407 9876230|9876230|9876230 9877125|9877125|9877125 2R - 9876985 9877145 stop_codon Sec24AB FlyBase G21539.1 TTCGGGCTCAGGTTAAATAGTATATAAGCAGGATATCCTACCACTATTGTATGCAGCATAAATACGAGTTTCTAAGAACCTAAAAACTCAGACTCTGGTGACTAGAAGCACGAAGCGAATGCAGGTGACACTGGTGCGAAACAATGGAGACCAGTTCGGGA 45 9877050 0.997688203 14 44 226 0.980392157 1.698970004 0.078431373 0.133333333 0.235294118 45 1 0 50 2R:9876985-9877145 6 Sec24AB FBtr0339407|FBtr0088451|FBtr0339406 9876230|9876230|9876230 9877125|9877125|9877125 TGACTA 6mer2-7 dme-miR-1012-3p 2R - 9877003 9877122 3'utr Sec24AB FlyBase G16352.1 ATAAGCAGGATATCCTACCACTATTGTATGCAGCATAAATACGAGTTTCTAAGAACCTAAAAACTCAGACTCTGGTGACTAGAAGCACGAAGCGAATGCAGGTGACACTGGTGCGAAACA 39 9877050 0.865125135 13 36 188 0.966666667 1.763427994 0.15 0.358974359 0.583333333 39 2 0 58 2R:9877003-9877122 6 17.5 2250 FBgn0033460 661.8766667 16.61 25.35 0.026439971 1.053582179 0.690335306 3 3 3 0.01 dme-miR-965-3p 7mer-m8 TACGCTT 2R 9882784 9882790 - 2R_9882784_9882790_- 0.620204855 0.620204855 0.620204855 0 CG1513 FBtr0331955|FBtr0088450|FBtr0302176 9882570|9882570|9882570 9883756|9883756|9884080 2R - 9882753 9882843 3'utr CG1513 FlyBase G21563.1 TCTACCGACTACTCTCACGCAAAGTTAACGCAAAATGAAACGAATAAAGTAAATACGCTTCGAAATTGATTTAAAGTAATATTTAACGAAC 32 9882790 0.957203199 6 31 151 0.976190476 1.612783857 0.333333333 0.21875 0.404761905 32 1 0 41 2R:9882753-9882843 7 CG1513 FBtr0088450|FBtr0302176|FBtr0331955 9882570|9882570|9882570 9883756|9884080|9883756 TACGCTT 7mer-m8 dme-miR-965-3p 2R - 9882769 9882803 3'utr CG1513 FlyBase G16371.1 CGAATAAAGTAAATACGCTTCGAAATTGATTTAAA 17 9882790 0.838328462 2 16 77 0.925925926 1.397940009 0.333333333 0.411764706 0.62962963 17 2 0 25 2R:9882769-9882803 7 21.5 2251 FBgn0033463 1345.3 46.16 70.75666667 0.015981565 0.465771231 0.303858294 0 0 0 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 2R 9883068 9883073 - 2R_9883068_9883073_- 1 1 1 0 CG1513 FBtr0331955|FBtr0088450|FBtr0302176 9882570|9882570|9882570 9883756|9883756|9884080 2R - 9883032 9883106 3'utr CG1513 FlyBase G21564.1 GAACACACGGTGCACAATGATTTTCCAGTCGCATAGCTTATAAATCAAATACGATTACCTTTAGTATTATGTTTC 106 9883084 0.74516739 13 102 936 0.957264957 1.748188027 0.102564103 0.094339623 0.179487179 106 4 1 112 2R:9883032-9883106 6 CG1513 FBtr0088450|FBtr0302176|FBtr0331955 9882570|9882570|9882570 9883756|9884080|9883756 TAGCTT 6mer3-8 dme-miR-79-3p 2R - 9883034 9883106 3'utr CG1513 FlyBase G16372.1 GAACACACGGTGCACAATGATTTTCCAGTCGCATAGCTTATAAATCAAATACGATTACCTTTAGTATTATGTT 61 9883084 0.752097632 8 54 510 0.870967742 1.431363764 0.139784946 0.426229508 0.623655914 61 10 2 81 2R:9883034-9883106 6 67.5 2252 FBgn0033463 1345.3 46.16 70.75666667 0.050174682 1.462305026 0.953973713 11 11 11 0.01 dme-miR-14-3p 6mer3-8 AAGACT 2R 9883202 9883207 - 2R_9883202_9883207_- 1 1 1 0 CG1513 FBtr0331955|FBtr0088450|FBtr0302176 9882570|9882570|9882570 9883756|9883756|9884080 2R - 9883185 9883224 3'utr CG1513 FlyBase G21565.1 TTCTATTTTTGAAATAAAAGACTCTGCTATAGACGAAATA 26 9883200 0.786648378 2 24 146 0.970588235 1.51851394 0 0.269230769 0.441176471 26 1 0 33 2R:9883185-9883224 6 CG1513 FBtr0088450|FBtr0302176|FBtr0331955 9882570|9882570|9882570 9883756|9884080|9883756 AAGACT 6mer3-8 dme-miR-14-3p 2R - 9883175 9883283 3'utr CG1513 FlyBase G16373.1 AATGGGATATATCAAAAGTTGTAGATTACAAAATGATAGTTACTTAAGGATAATAGAGATTCTATTTTTGAAATAAAAGACTCTGCTATAGACGAAATACAATACCGAC 33 9883200 0.976595416 10 30 189 0.909090909 1.22184875 0 0.484848485 0.690909091 33 3 2 50 2R:9883175-9883283 6 26 2253 FBgn0033463 1345.3 46.16 70.75666667 0.019326544 0.563258232 0.367456541 -7 -7 -7 0.01 dme-miR-33-5p 6mer2-7 AATGCA 2R 9883618 9883623 - 2R_9883618_9883623_- 1 1 1 0 CG1513 FBtr0331955|FBtr0088450|FBtr0302176 9882570|9882570|9882570 9883756|9883756|9884080 2R - 9883552 9883662 3'utr CG1513 FlyBase G21566.1 AGTGCGCAAACCTCTCAACACTGACGATACAACGTAACGAATGCAGGAAAAGTTAGAGCAACAACTGAACTGGCAGAAGGAGATCCATGATGGAGGCTCCAGGGTCTGGTT 20 9883621 0.931747371 9 17 71 0.869565217 0.823908741 0.130434783 0.15 0.260869565 20 1 2 20 2R:9883552-9883662 6 CG1513 FBtr0088450|FBtr0302176|FBtr0331955 9882570|9882570|9882570 9883756|9884080|9883756 AATGCA 6mer2-7 dme-miR-33-5p 2R - 9883551 9883640 3'utr CG1513 FlyBase G16375.1 GACGATACAACGTAACGAATGCAGGAAAAGTTAGAGCAACAACTGAACTGGCAGAAGGAGATCCATGATGGAGGCTCCAGGGTCTGGTTA 9 9883621 0.990226461 4 9 30 1 1.113943352 0.230769231 0.444444444 0.615384615 9 0 0 13 2R:9883551-9883640 6 6 2254 FBgn0033463 1345.3 46.16 70.75666667 0.004459972 0.129982669 0.084797663 -2 -2 -2 0.01 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2R 9915625 9915630 - 2R_9915625_9915630_- 1 0.999999978 0.999999989 0 Mef2 FBtr0330707|FBtr0088445|FBtr0330708|FBtr0088447 9915500|9913494|9915500|9913494 9916745|9916745|9916454|9916745 2R - 9915617 9915663 3'utr Mef2 FlyBase G21584.1 GTAATTTAAATTTAAAGTGGATTTCTATTCAATTTGAAGTGTTTCAA 47 9915641 0.77491588 3 47 499 1 1.792391689 0.016129032 0.255319149 0.435483871 47 0 0 62 2R:9915617-9915663 6 Mef2 FBtr0088447|FBtr0330707|FBtr0088445|FBtr0330708 9913494|9915500|9913494|9915500 9916745|9916745|9916745|9916454 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2R - 9915623 9915691 3'utr Mef2 FlyBase G16384.1 TCTCTTAAGCGAAACGAAGTCATAATTTGTAATTTAAATTTAAAGTGGATTTCTATTCAATTTGAAGTG 34 9915641 0.991729753 4 33 371 1 1.672097858 0 0.323529412 0.510638298 34 0 0 47 2R:9915623-9915691 6 33.5 2255 FBgn0011656 531.1733333 15.92 24.39333333 0.063067925 2.104271357 1.373326045 11 11 11 0.01 dme-miR-1007-3p 6mer3-8 TGAGCT 2R 9916217 9916222 - 2R_9916217_9916222_- 1 1 1 0 Mef2 FBtr0330707|FBtr0088445|FBtr0330708|FBtr0088444|FBtr0088446|FBtr0088447|FBtr0088443 9915500|9913494|9915500|9916116|9916116|9913494|9916116 9916745|9916745|9916454|9916745|9916745|9916745|9916745 2R - 9916195 9916232 3'utr Mef2 FlyBase G21585.1 GTTAGAGTGTTGAGCTGATTTAGTTTAGTTACAATTAC 6 9916214 0.706100947 4 6 63 1 1.041392685 0.909090909 0.5 0.727272727 6 0 0 11 2R:9916195-9916232 6 Mef2 FBtr0088446|FBtr0088447|FBtr0088443|FBtr0330707|FBtr0088445|FBtr0330708|FBtr0088444 9916116|9913494|9916116|9915500|9913494|9915500|9916116 9916745|9916745|9916745|9916745|9916745|9916454|9916745 TGAGCT 6mer3-8 dme-miR-1007-3p 2R - 9916201 9916234 3'utr Mef2 FlyBase G16385.1 ATGTTAGAGTGTTGAGCTGATTTAGTTTAGTTAC 9 9916222 0.776739322 4 7 106 0.733333333 0.740362689 0.6 0.555555556 0.733333333 9 3 1 11 2R:9916201-9916234 6 6.5 2256 FBgn0011656 531.1733333 15.92 24.39333333 0.01223706 0.408291457 0.266466248 -8 0 -4 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 2R 9962771 9962776 + 2R_9962771_9962776_+ 1 0.999999999 0.999999999 0 Pal1 FBtr0339422 9962739 9963031 2R + 9962747 9962821 3'utr Pal1 FlyBase G14480.2 GTGCTAACTCCTCACTCAATGTCCTGTGTTGTGCTGTCACACTTAACTGATTTAGTGTCCTGTACTTATAAGCTC 174 9962766 0.820377491 19 165 1679 0.955445545 1.507406059 0.173267327 0.137931034 0.257425743 174 4 5 193 2R:9962747-9962821 6 Pal1 FBtr0339422 9962739 9963031 TGTGTT 6mer3-8 dme-miR-317-3p 2R + 9962747 9962821 3'utr Pal1 FlyBase G11011.1 GTGCTAACTCCTCACTCAATGTCCTGTGTTGTGCTGTCACACTTAACTGATTTAGTGTCCTGTACTTATAAGCTC 98 9962766 0.809110673 16 95 910 0.981707317 1.90579588 0.18902439 0.428571429 0.658536585 98 2 1 161 2R:9962747-9962821 6 105.5 2257 FBgn0033466 329.6666667 20.27 30.62666667 0.320020222 5.204736063 3.444710492 5 5 5 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 9962909 9962915 + 2R_9962909_9962915_+ 0.661615645 0.661615645 0.661615645 0 Pal1 FBtr0339422 9962739 9963031 2R + 9962864 9962930 3'utr Pal1 FlyBase G14481.1 ACGCTTTTTTTGGTGTCGTTAATTACACAGCATGTCCACTTCTTGTGTGTTCTGTATTCGTTGGCTT 14 9962916 0.659987744 6 13 153 0.944444444 1.230448921 0.055555556 0.142857143 0.333333333 14 1 0 17 2R:9962864-9962930 7 Pal1 FBtr0339422 9962739 9963031 TGTGTTC 7mer-m8 dme-miR-317-3p 2R + 9962890 9962948 3'utr Pal1 FlyBase G11012.1 ACAGCATGTCCACTTCTTGTGTGTTCTGTATTCGTTGGCTTACTTTTCGTTCAACTTTA 17 9962907 0.992088512 7 14 165 1 1.397940009 0 0.352941176 0.56 17 0 0 25 2R:9962890-9962948 7 11 2258 FBgn0033466 329.6666667 20.27 30.62666667 0.033367037 0.542673902 0.359164127 -7 2 -2.5 0.01 dme-miR-190-5p 6mer3-8 ACATAT 2R 9963956 9963961 - 2R_9963956_9963961_- 1 1 1 0 CG1418 FBtr0088440 9963833 9964029 2R - 9963900 9963969 3'utr CG1418 FlyBase G21594.1 GGGGCTAAACATATTCGCCACTATGGGGCCTTGCAAGTCGACACAATATGTTGTACACCTATTTATAACG 33 9963946 0.81770796 8 32 181 0.95 1.102662342 0.1 0.181818182 0.325 33 0 2 38 2R:9963900-9963969 6 CG1418 FBtr0088440 9963833 9964029 ACATAT 6mer3-8 dme-miR-190-5p 2R - 9963909 9963965 3'utr CG1418 FlyBase G16391.1 CTAAACATATTCGCCACTATGGGGCCTTGCAAGTCGACACAATATGTTGTACACCTA 16 9963946 0.961834292 6 16 81 1 1.301029996 0 0.1875 0.35 16 0 0 20 2R:9963909-9963965 6 17 2259 FBgn0033468 462.32 50.74666667 77.77 0.036771068 0.334997373 0.218593288 -15 -15 -15 0.01 dme-miR-277-3p 6mer3-8 TGCATT 2R 9993395 9993400 + 2R_9993395_9993400_+ 1 1 1 0 TER94 FBtr0112906|FBtr0343852|FBtr0112905|FBtr0088391 9993076|9993076|9993076|9993076 9993559|9993559|9993559|9993559 2R + 9993360 9993420 3'utr TER94 FlyBase G14504.1 TGGCGAACTATTCCGCGCCTCACACTAATCATTCGTGCATTGTCGGTAGAGTGGCTCCGAT 21 9993400 0.789374731 4 18 166 0.869565217 0.698970004 0.043478261 0.095238095 0.173913043 21 0 3 20 2R:9993360-9993420 6 TER94 FBtr0088391|FBtr0112905|FBtr0343852|FBtr0112906 9993076|9993076|9993076|9993076 9993559|9993559|9993559|9993559 TGCATT 6mer3-8 dme-miR-277-3p 2R + 9993352 9993429 3'utr TER94 FlyBase G11038.1 ATTTTAATTGGCGAACTATTCCGCGCCTCACACTAATCATTCGTGCATTGTCGGTAGAGTGGCTCCGATATATGAGTT 9 9993400 0.978635808 7 9 62 1 1.204119983 0.0625 0.444444444 0.6875 9 0 0 16 2R:9993352-9993429 6 11.5 2260 FBgn0261014 4646.64 184.35 281.7433333 0.002474907 0.06238134 0.040817292 -5 -5 -5 0.01 dme-miR-252-5p 6mer3-8 GTACTT 3L 10220647 10220652 - 3L_10220647_10220652_- 1 1 1 0 scramb1 FBtr0076301|FBtr0076303|FBtr0076302 10220483|10220483|10220481 10221072|10221072|10221072 3L - 10220625 10220693 3'utr scramb1 FlyBase G35927.1 GAAGCGACAACTAACTAACGAATGATTCGTTATTGAAACATGTACTTTAAACTGTATGTTAAGTGTCTT 16 10220653 0.942159545 6 14 136 0.944444444 1.230448921 0.111111111 0.125 0.222222222 16 1 0 17 3L:10220625-10220693 6 scramb1 FBtr0076302|FBtr0076303|FBtr0076301 10220481|10220483|10220483 10221072|10221072|10221072 GTACTT 6mer3-8 dme-miR-252-5p 3L - 10220629 10220704 3'utr scramb1 FlyBase G27180.1 ATTGATGCTCTGAAGCGACAACTAACTAACGAATGATTCGTTATTGAAACATGTACTTTAAACTGTATGTTAAGTG 11 10220653 0.989309492 6 11 101 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 3L:10220629-10220704 6 9.5 2261 FBgn0052056 455.3333333 27.11666667 41.42333333 0.020863836 0.350338045 0.229339342 1 1 1 0.01 dme-miR-79-3p 7mer-A1 AGCTTTA 3L 10220719 10220725 - 3L_10220719_10220725_- 0.823349562 0.823349562 0.823349562 0 scramb1 FBtr0076301|FBtr0076303|FBtr0076302 10220483|10220483|10220481 10221072|10221072|10221072 3L - 10220711 10220742 3'utr scramb1 FlyBase G35928.1 GTATTCAACGACAAATCAGCTTTATTTATGAA 8 10220727 0.970590523 2 8 50 1 1.041392685 0.181818182 0.25 0.454545455 8 0 0 11 3L:10220711-10220742 7 scramb1 FBtr0076302|FBtr0076303|FBtr0076301 10220481|10220483|10220483 10221072|10221072|10221072 AGCTTTA 7mer-A1 dme-miR-79-3p 3L - 10220706 10220758 3'utr scramb1 FlyBase G27181.1 CAATTACTTGTGTAAAGTATTCAACGACAAATCAGCTTTATTTATGAATTTTG 14 10220727 0.962669746 4 13 102 1 1.278753601 0.157894737 0.214285714 0.421052632 14 0 0 19 3L:10220706-10220758 7 10 2262 FBgn0052056 455.3333333 27.11666667 41.42333333 0.021961933 0.36877689 0.241409833 2 2 2 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA 3L 10220846 10220851 - 3L_10220846_10220851_- 1 0.999988189 0.999994094 8.34E-06 scramb1 FBtr0076301|FBtr0076303|FBtr0076302 10220483|10220483|10220481 10221072|10221072|10221072 3L - 10220793 10220856 3'utr scramb1 FlyBase G35929.1 AATTTTGATGAACATACTGAACTCAGGCTTCCTTCGAGAGGACATTGCCAGAATATAAAACTAA 15 10220839 0.850880838 8 14 83 0.9 1.255272505 0.35 0.333333333 0.5 15 2 0 18 3L:10220793-10220856 6 scramb1 FBtr0076302|FBtr0076303|FBtr0076301 10220481|10220483|10220483 10221072|10221072|10221072 TGATGA 6mer3-8 dme-miR-2a-2-5p 3L - 10220781 10220870 3'utr scramb1 FlyBase G27182.1 TGAAACTCCTTGTTAATTTTGATGAACATACTGAACTCAGGCTTCCTTCGAGAGGACATTGCCAGAATATAAAACTAACTTTAAGTTAGC 14 10220839 0.972983514 7 14 82 1 1.301029996 0.4 0.357142857 0.55 14 0 0 20 3L:10220781-10220870 6 7 2263 FBgn0052056 455.3333333 27.11666667 41.42333333 0.015373353 0.258143823 0.168986883 -12 -12 -12 0.01 dme-miR-7-5p 6mer3-8 GTCTTC 3L 10220909 10220914 - 3L_10220909_10220914_- 1 1 1 0 scramb1 FBtr0076301|FBtr0076303|FBtr0076302 10220483|10220483|10220481 10221072|10221072|10221072 3L - 10220890 10220952 3'utr scramb1 FlyBase G35930.1 TTTATCCAAATATCTTCCCGGTGAACTGTCGCGTACTAGTCTTCTGTACCAAATGCTTATTGA 34 10220911 0.709349063 7 31 253 0.976744186 1.62324929 0.139534884 0.264705882 0.418604651 34 1 0 42 3L:10220890-10220952 6 scramb1 FBtr0076302|FBtr0076303|FBtr0076301 10220481|10220483|10220483 10221072|10221072|10221072 GTCTTC 6mer3-8 dme-miR-7-5p 3L - 10220894 10220944 3'utr scramb1 FlyBase G27183.1 AATATCTTCCCGGTGAACTGTCGCGTACTAGTCTTCTGTACCAAATGCTTA 27 10220910 0.969422433 3 27 207 1 1.662757832 0.173913043 0.444444444 0.673913043 27 0 0 46 3L:10220894-10220944 6 27 2264 FBgn0052056 455.3333333 27.11666667 41.42333333 0.059297218 0.995697603 0.65180655 -3 -4 -3.5 0.01 dme-bantam-3p 6mer2-7 GATCTC 3L 1037688 1037693 - 3L_1037688_1037693_- 1 1 1 0 bab1 FBtr0333268|FBtr0333270|FBtr0333269|FBtr0072642 1036367|1036367|1036367|1036367 1038321|1038321|1038321|1038321 3L - 1037667 1037704 3'utr bab1 FlyBase G33216.1 AAATAGCGACCGATCTCTTTAGTTGTAAGCTACAGCGA 12 1037686 0.672499411 4 12 96 1 1.113943352 0 0.083333333 0.153846154 12 0 0 13 3L:1037667-1037704 6 bab1 FBtr0333268|FBtr0333270|FBtr0333269|FBtr0072642 1036367|1036367|1036367|1036367 1038321|1038321|1038321|1038321 GATCTC 6mer2-7 dme-bantam-3p 3L - 1037662 1037701 3'utr bab1 FlyBase G25132.1 TAGCGACCGATCTCTTTAGTTGTAAGCTACAGCGAAGGTG 5 1037685 0.973966038 3 5 38 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3L:1037662-1037701 6 8 2265 FBgn0004870 53 1.19 1.816666667 0.150943396 6.722689076 4.403669725 -7 -8 -7.5 0.01 dme-miR-12-5p 7mer-A1 ATACTCA 3L 10590722 10590728 + 3L_10590722_10590728_+ 0.823349562 0.823349562 0.823349562 0 A2bp1 FBtr0305093|FBtr0305094|FBtr0113418|FBtr0305096|FBtr0305097|FBtr0332985|FBtr0113419|FBtr0305095 10590564|10590564|10590564|10590564|10590564|10590564|10590208|10590564 10593403|10590925|10590967|10593403|10590967|10594012|10590967|10594012 3L + 10590693 10590740 3'utr A2bp1 FlyBase G29407.1 GAAGTTACAACTAAACCGATAGATGCAGGATACTCAACACCCAACAGC 15 10590716 0.890983034 3 15 45 1 1.255272505 0.055555556 0.2 0.333333333 15 0 0 18 3L:10590693-10590740 7 A2bp1 FBtr0305095|FBtr0113419|FBtr0332985|FBtr0305097|FBtr0305096|FBtr0113418|FBtr0305094|FBtr0305093 10590564|10590208|10590564|10590564|10590564|10590564|10590564|10590564 10594012|10590967|10594012|10590967|10593403|10590967|10590925|10593403 ATACTCA 7mer-A1 dme-miR-12-5p 3L + 10590688 10590736 3'utr A2bp1 FlyBase G22254.1 AAGTAGAAGTTACAACTAAACCGATAGATGCAGGATACTCAACACCCAA 9 10590715 0.920407786 2 8 30 0.857142857 1.079181246 0 0.333333333 0.571428571 9 2 0 12 3L:10590688-10590736 7 12 2266 FBgn0052062 354.2866667 11.58666667 17.8 0.033870877 1.035673188 0.674157303 6 7 6.5 0.01 dme-miR-12-5p 8mer-A1 AATACTCA 3L 10591456 10591463 + 3L_10591456_10591463_+ 0.643927113 0.643927113 0.643927113 0 A2bp1 FBtr0305093|FBtr0305096|FBtr0332985|FBtr0305095 10590564|10590564|10590564|10590564 10593403|10593403|10594012|10594012 3L + 10591429 10591490 5'utr A2bp1 FlyBase G29411.1 ATATATCTATAATTTGATTACCCAAAGAATACTCATTTCTGTATTGTACCGTATTGTCAACG 17 10591465 0.986713624 5 17 178 1 1.278753601 0.157894737 0.117647059 0.210526316 17 0 0 19 3L:10591429-10591490 8 A2bp1 FBtr0305095|FBtr0332985|FBtr0305096|FBtr0305093 10590564|10590564|10590564|10590564 10594012|10594012|10593403|10593403 AATACTCA 8mer-A1 dme-miR-12-5p 3L + 10591442 10591495 5'utr A2bp1 FlyBase G22255.1 TTGATTACCCAAAGAATACTCATTTCTGTATTGTACCGTATTGTCAACGAATTT 10 10591465 0.990367559 6 10 95 1 1.204119983 0 0.3 0.5625 10 0 0 16 3L:10591442-10591495 8 12.5 2267 FBgn0052062 354.2866667 11.58666667 17.8 0.035282163 1.078826237 0.702247191 -9 -9 -9 0.01 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 10591542 10591549 + 3L_10591542_10591549_+ 0.668734347 0.668734347 0.668734347 0 A2bp1 FBtr0305093|FBtr0305096|FBtr0332985|FBtr0305095 10590564|10590564|10590564|10590564 10593403|10593403|10594012|10594012 3L + 10591502 10591688 5'utr A2bp1 FlyBase G29412.1 AATGCATTGCTTGGTTGTTCCTAATAATTTTATATATTTTGGCAGCTAAAACCACTCACACTCAACTCACGACTCAATTCGAATTGCTCAAAAAAAAATCGTAGCGCATAGGTAAATGCAAAAGATCAACACGTAGACATATCCTTGGAATATACAATAATATTTACTTTAAATGCCGCCATAGCAG 121 10591541 0.983832149 19 112 862 0.927631579 1.848189117 0.019736842 0.214876033 0.375 121 10 1 141 3L:10591502-10591688 8 A2bp1 FBtr0305095|FBtr0332985|FBtr0305096|FBtr0305093 10590564|10590564|10590564|10590564 10594012|10594012|10593403|10593403 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L + 10591502 10591564 5'utr A2bp1 FlyBase G22256.1 AATGCATTGCTTGGTTGTTCCTAATAATTTTATATATTTTGGCAGCTAAAACCACTCACACTC 74 10591541 0.769587865 12 67 530 0.919191919 1.658011397 0 0.256756757 0.444444444 74 7 1 91 3L:10591502-10591564 8 82.5 2268 FBgn0052062 354.2866667 11.58666667 17.8 0.232862277 7.120253165 4.634831461 1 1 1 0.01 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 10592110 10592117 + 3L_10592110_10592117_+ 0.668734347 0.668734347 0.668734347 0 A2bp1 FBtr0305093|FBtr0305096|FBtr0332985|FBtr0305095 10590564|10590564|10590564|10590564 10593403|10593403|10594012|10594012 3L + 10592071 10592136 5'utr A2bp1 FlyBase G29413.1 ATGCTCAATGGAAAATAAGCGAACAAACTTTGATTCTTAGGCAGCTACTGTCGTCAAATTTAAACT 76 10592108 0.988454678 11 69 628 0.913978495 1.327358934 0.161290323 0.197368421 0.344086022 76 5 3 85 3L:10592071-10592136 8 A2bp1 FBtr0305095|FBtr0332985|FBtr0305096|FBtr0305093 10590564|10590564|10590564|10590564 10594012|10594012|10593403|10593403 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L + 10592087 10592133 5'utr A2bp1 FlyBase G22258.1 AAGCGAACAAACTTTGATTCTTAGGCAGCTACTGTCGTCAAATTTAA 56 10592108 0.800372247 9 51 483 0.93258427 1.618048097 0.247191011 0.428571429 0.640449438 56 5 1 83 3L:10592087-10592133 8 65 2269 FBgn0052062 354.2866667 11.58666667 17.8 0.183467249 5.609896433 3.651685393 2 2 2 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3L 10592578 10592583 + 3L_10592578_10592583_+ 1 1 1 0 A2bp1 FBtr0305093|FBtr0305096|FBtr0332985|FBtr0305095 10590564|10590564|10590564|10590564 10593403|10593403|10594012|10594012 3L + 10592560 10592650 5'utr A2bp1 FlyBase G29415.1 ACGTTGACATTTTTAAAGCCAAAGTTTATATTTTAAATGATTTTTAGTTAGGTATTAGTTCGTATGCTGACGACAGATGACACAAATGGAT 13 10592584 0.987204723 7 13 117 1 1.146128036 0 0.076923077 0.142857143 13 0 0 14 3L:10592560-10592650 6 A2bp1 FBtr0305095|FBtr0332985|FBtr0305096|FBtr0305093 10590564|10590564|10590564|10590564 10594012|10594012|10593403|10593403 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 10592560 10592638 5'utr A2bp1 FlyBase G22259.1 ACGTTGACATTTTTAAAGCCAAAGTTTATATTTTAAATGATTTTTAGTTAGGTATTAGTTCGTATGCTGACGACAGATG 14 10592584 0.886481091 7 12 122 0.80952381 1.230448921 0.19047619 0.428571429 0.619047619 14 4 0 17 3L:10592560-10592638 6 6.5 2270 FBgn0052062 354.2866667 11.58666667 17.8 0.018346725 0.560989643 0.365168539 -6 -6 -6 0.01 dme-miR-1003-3p 6mer2-7 TGTGAG 3L 10641055 10641060 - 3L_10641055_10641060_- 1 1 1 0 CG32066 FBtr0076278|FBtr0076277 10640284|10640414 10641200|10641200 3L - 10640962 10641079 3'utr CG32066 FlyBase G35946.1 TGTATTATTTGTAAAAAATTGTGAGCGAGTGTTGTGCTAGCAGGAGGCAACCTCTAGTTTTATTTTTACCCTGTGTGCATTTCCAGCATTTGTTTCGTACTGTTTTAGACTCCAGCCT 65 10641061 0.947171997 9 61 465 0.951219512 1.892094603 0.146341463 0.169230769 0.341463415 65 4 0 78 3L:10640962-10641079 6 CG32066 FBtr0076277|FBtr0076278 10640414|10640284 10641200|10641200 TGTGAG 6mer2-7 dme-miR-1003-3p 3L - 10641035 10641085 3'utr CG32066 FlyBase G27193.1 GGCTTCTGTATTATTTGTAAAAAATTGTGAGCGAGTGTTGTGCTAGCAGGA 52 10641061 0.75648163 6 47 369 0.884615385 1.838849091 0.205128205 0.423076923 0.615384615 52 9 0 69 3L:10641035-10641085 6 53 2271 FBgn0052066 3082.423333 164.4233333 252.2266667 0.017194264 0.322338679 0.210128456 1 1 1 0.01 dme-miR-283-5p 8mer-m1 TGATATTT 3L 10664398 10664405 + 3L_10664398_10664405_+ 0.555593841 0.555593841 0.555593841 0 CG32068 FBtr0113421 10664364 10664435 3L + 10664374 10664433 3'utr CG32068 FlyBase G29436.1 AATCTTATCTTTTACCATCAAGTTTGATATTTTGAAATATAAAATCGCTGTGTATAATCA 21 10664397 0.793768151 8 20 189 0.96 1.380211242 0.2 0.095238095 0.24 21 1 0 24 3L:10664374-10664433 8 CG32068 FBtr0113421 10664364 10664435 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 10664382 10664415 3'utr CG32068 FlyBase G22277.1 CTTTTACCATCAAGTTTGATATTTTGAAATATAA 8 10664397 0.757373083 3 6 72 0.818181818 0.954242509 0.090909091 0.375 0.545454545 8 2 0 9 3L:10664382-10664415 8 10 2272 FBgn0052068 230.5566667 42.00666667 63.54666667 0.043373285 0.238057451 0.157364666 1 1 1 0.01 dme-miR-33-5p 7mer-A1 AATGCAA 3L 10689467 10689473 + 3L_10689467_10689473_+ 0.782911824 0.782911824 0.782911824 0 simj FBtr0331574 10689109 10690734 3L + 10689391 10689493 3'utr simj FlyBase G29447.1 AGTTTCCCTTTTTGTTACACCACTGCATTACATATTTTAATTAATTTGCCAGCCAGAATATAGCAGCCGATAAATGAATGCAAACTTTTAAGCTCCTAGTAAT 53 10689465 0.965463571 9 51 279 0.96875 1.792391689 0.046875 0.169811321 0.3125 53 2 0 62 3L:10689391-10689493 7 simj FBtr0331574 10689109 10690734 AATGCAA 7mer-A1 dme-miR-33-5p 3L + 10689450 10689490 3'utr simj FlyBase G22282.1 ATAGCAGCCGATAAATGAATGCAAACTTTTAAGCTCCTAGT 19 10689465 0.839271138 2 18 96 0.935483871 0.985276743 0 0.473684211 0.677419355 19 0 2 29 3L:10689450-10689490 7 32.5 2273 FBgn0010762 1928.513333 47.80333333 73.36666667 0.01685236 0.679868907 0.442980463 2 2 2 0.01 dme-miR-970-3p 6mer3-8 TCTTAT 3L 10689699 10689704 + 3L_10689699_10689704_+ 1 1 1 0 simj FBtr0331574 10689109 10690734 3L + 10689651 10689705 3'utr simj FlyBase G29448.1 TTGGGAGTCCCAATTGGGATTGCTGAACTGCATGGCTCCCTTTTTTGGTCTTATT 8 10689695 0.993729678 4 7 90 0.9 0.653212514 0.1 0.25 0.4 8 0 1 9 3L:10689651-10689705 6 simj FBtr0331574 10689109 10690734 TCTTAT 6mer3-8 dme-miR-970-3p 3L + 10689652 10689705 3'utr simj FlyBase G22283.1 TGGGAGTCCCAATTGGGATTGCTGAACTGCATGGCTCCCTTTTTTGGTCTTATT 7 10689683 0.987373965 4 7 52 1 1 0.3 0.428571429 0.6 7 0 0 10 3L:10689652-10689705 6 4 2274 FBgn0010762 1928.513333 47.80333333 73.36666667 0.002074137 0.083676173 0.054520672 4 16 10 0.01 dme-miR-995-5p 6mer3-8 AATTCG 3L 10689723 10689728 + 3L_10689723_10689728_+ 1 1 1 0 simj FBtr0331574 10689109 10690734 3L + 10689710 10689756 3'utr simj FlyBase G29449.1 AATTTTGTCGTACAATTCGTTTAGTTCTTAGCATCGTGAATAAATCT 14 10689725 0.792464415 7 12 137 0.866666667 1.113943352 0 0.071428571 0.133333333 14 2 0 13 3L:10689710-10689756 6 simj FBtr0331574 10689109 10690734 AATTCG 6mer3-8 dme-miR-995-5p 3L + 10689710 10689757 3'utr simj FlyBase G22284.1 AATTTTGTCGTACAATTCGTTTAGTTCTTAGCATCGTGAATAAATCTA 9 10689725 0.805875635 4 9 95 1 1.113943352 0 0.222222222 0.461538462 9 0 0 13 3L:10689710-10689757 6 9 2275 FBgn0010762 1928.513333 47.80333333 73.36666667 0.004666807 0.18827139 0.122671513 -2 -2 -2 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 3L 10690292 10690297 + 3L_10690292_10690297_+ 1 1 1 0 simj FBtr0331574 10689109 10690734 3L + 10690276 10690314 3'utr simj FlyBase G29450.1 AGATATGAATATAATATTGACTGAATATTAGCATATACA 13 10690292 0.654188835 5 10 98 0.785714286 0.740362689 0.071428571 0.076923077 0.142857143 13 2 1 11 3L:10690276-10690314 6 simj FBtr0331574 10689109 10690734 TTGACT 6mer3-8 dme-miR-1012-3p 3L + 10690263 10690311 3'utr simj FlyBase G22285.1 GATCCTCCATTGAAGATATGAATATAATATTGACTGAATATTAGCATAT 6 10690292 0.966062322 4 5 39 0.666666667 0.77815125 0.111111111 0.333333333 0.555555556 6 3 0 6 3L:10690263-10690311 6 8 2276 FBgn0010762 1928.513333 47.80333333 73.36666667 0.004148273 0.167352346 0.109041345 0 0 0 0.01 dme-miR-283-5p 8mer-A1 TGATATTA 3L 10691907 10691914 + 3L_10691907_10691914_+ 0.592192292 0.592192292 0.592192292 0 CG11811 FBtr0076265 10691876 10692598 3L + 10691876 10691953 stop_codon CG11811 FlyBase G29452.1 AAGGCGAAGCATTTTGCGGACGAATGTAGAATGATATTAACCTCAATGGGGTGGGGGTAGAAATTGTTTGTGAACTGA 23 10691912 0.91703048 11 22 141 0.962962963 1.414973348 0.074074074 0.173913043 0.296296296 23 1 0 26 3L:10691876-10691953 8 CG11811 FBtr0076265 10691876 10692598 TGATATTA 8mer-A1 dme-miR-283-5p 3L + 10691847 10691956 stop_codon CG11811 FlyBase G22287.1 GAAGCAGGGAGTATCAGTTAACTTGAATTAAGGCGAAGCATTTTGCGGACGAATGTAGAATGATATTAACCTCAATGGGGTGGGGGTAGAAATTGTTTGTGAACTGATCG 29 10691922 0.974754139 12 28 172 0.953488372 1.612783857 0.093023256 0.379310345 0.581395349 29 2 0 41 3L:10691847-10691956 8 17 2277 FBgn0036099 1176.04 91.50333333 140.2833333 0.014455291 0.185785582 0.121183319 -5 -15 -10 0.01 dme-miR-1012-3p 8mer-A1 TTGACTAA 3L 10692389 10692396 + 3L_10692389_10692396_+ 0.626053444 0.627006226 0.626529835 0.000673731 CG11811 FBtr0076265 10691876 10692598 3L + 10692365 10692529 3'utr CG11811 FlyBase G29453.1 GGAGCCCCCACCCTGCAAACCACTTTGACTAATGGCATTTATACTTAAGAAATGGCTTGTATTTATTATATACTCTCCTCCTGTCCACCTCATCATTGTTGTGCAAATTCGTTGTTCTAGTTGTAATTTTAAGCTGAAATTTGTTGCGCGCCGCTTCACGGTCGA 111 10692389 0.899805973 19 103 837 0.937007874 1.376576957 0.173228346 0.108108108 0.220472441 111 4 4 119 3L:10692365-10692529 8 CG11811 FBtr0076265 10691876 10692598 TTGACTAA 8mer-A1 dme-miR-1012-3p 3L + 10692365 10692502 3'utr CG11811 FlyBase G22288.1 GGAGCCCCCACCCTGCAAACCACTTTGACTAATGGCATTTATACTTAAGAAATGGCTTGTATTTATTATATACTCTCCTCCTGTCCACCTCATCATTGTTGTGCAAATTCGTTGTTCTAGTTGTAATTTTAAGCTGAA 65 10692389 0.95501675 17 61 475 0.944444444 1.40654018 0.101851852 0.476923077 0.685185185 65 3 3 102 3L:10692365-10692502 8 64.5 2278 FBgn0036099 1176.04 91.50333333 140.2833333 0.054845073 0.704892354 0.459783771 0 0 0 0.01 dme-miR-932-5p 7mer-A1 GAATTGA 3L 10874507 10874513 + 3L_10874507_10874513_+ 0.823349562 0.823349562 0.823349562 0 tna FBtr0076268|FBtr0301658|FBtr0076267 10874466|10874466|10874466 10875743|10876496|10874646 3L + 10874486 10874619 5'utr tna FlyBase G29488.1 CGAAGCTGGGAGAGAGTTGGAGAATTGAAGTGGCAGAATACCATAAATTGTATATAGTATTATTAATTTTAATGAAATGTGCACTAGACGCCAGTCGCGTACTTCAACCAACATTTTCGTTTCCTCACACAAAC 225 10874503 0.799852762 23 203 1561 0.902040816 1.566241023 0.363265306 0.08 0.155102041 225 19 5 221 3L:10874486-10874619 7 tna FBtr0301658|FBtr0076267|FBtr0076268 10874466|10874466|10874466 10876496|10874646|10875743 GAATTGA 7mer-A1 dme-miR-932-5p 3L + 10874486 10874597 5'utr tna FlyBase G22312.1 CGAAGCTGGGAGAGAGTTGGAGAATTGAAGTGGCAGAATACCATAAATTGTATATAGTATTATTAATTTTAATGAAATGTGCACTAGACGCCAGTCGCGTACTTCAACCAAC 182 10874503 0.766769667 25 157 1145 0.88030888 1.579783597 0.498069498 0.324175824 0.525096525 182 26 5 228 3L:10874486-10874597 7 131.5 2279 FBgn0026160 929.45 23.40666667 36.18333333 0.141481521 5.618057533 3.634269922 4 4 4 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3L 10874758 10874764 + 3L_10874758_10874764_+ 0.443131018 0.443131018 0.443131018 0 tna FBtr0076268|FBtr0301658 10874466|10874466 10875743|10876496 3L + 10874687 10874816 5'utr tna FlyBase G29489.1 ATTACAAACAACACACTGGATGAGAAATCGAAGCGGAAATTTGAATTTGCCCGTGTTGAAAAACAATGAAATGTGATTTAAAAATTAATTAATTAAATTAATTGGCATTTAATTTAAAGCTAACTGAGAA 448 10874764 0.980464226 19 440 3252 0.984819734 2.414137362 0.024667932 0.149553571 0.277039848 448 7 1 519 3L:10874687-10874816 7 tna FBtr0301658|FBtr0076268 10874466|10874466 10876496|10875743 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 10874686 10874791 5'utr tna FlyBase G22313.1 TATTACAAACAACACACTGGATGAGAAATCGAAGCGGAAATTTGAATTTGCCCGTGTTGAAAAACAATGAAATGTGATTTAAAAATTAATTAATTAAATTAATTGG 341 10874764 0.982790011 16 330 2490 0.975609756 1.865301426 0.017738359 0.272727273 0.450110865 341 6 5 440 3L:10874686-10874791 7 373 2280 FBgn0026160 929.45 23.40666667 36.18333333 0.401312604 15.93563087 10.30861354 -6 -6 -6 0.01 dme-miR-317-5p 7mer-A1 TATCCCA 3L 10875017 10875023 + 3L_10875017_10875023_+ 0.823349562 0.823349562 0.823349562 0 tna FBtr0076268|FBtr0301658 10874466|10874466 10875743|10876496 3L + 10875005 10875044 5'utr tna FlyBase G29491.1 TTTGTTTTGCCTTATCCCAGACTTTTGTTGCAAAATGTTT 7 10875030 0.937744082 5 7 60 1 1.041392685 0.272727273 0.428571429 0.636363636 7 0 0 11 3L:10875005-10875044 7 tna FBtr0301658|FBtr0076268 10874466|10874466 10876496|10875743 TATCCCA 7mer-A1 dme-miR-317-5p 3L + 10875011 10875069 5'utr tna FlyBase G22316.1 TTGCCTTATCCCAGACTTTTGTTGCAAAATGTTTCTTGTTCATTTACAAAGTATTAAAA 7 10875029 0.992209256 4 6 67 0.9 0.954242509 0.2 0.428571429 0.6 7 1 0 9 3L:10875011-10875069 7 5.5 2281 FBgn0026160 929.45 23.40666667 36.18333333 0.005917478 0.23497579 0.152003685 -13 -12 -12.5 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 3L 10875278 10875283 + 3L_10875278_10875283_+ 1 1 1 0 tna FBtr0076268|FBtr0301658 10874466|10874466 10875743|10876496 3L + 10875198 10875297 5'utr tna FlyBase G29492.1 AATGAAAACATTTACATTTTAATTGTTGCATAATTTTAATTATTTTTTAAAGCCTATCTACATATTAAAAGTAAATGATTTAGCTTGGTAAACGATAAAC 25 10875277 0.981358984 9 25 190 1 1.477121255 0.2 0.2 0.333333333 25 0 0 30 3L:10875198-10875297 6 tna FBtr0301658|FBtr0076268 10874466|10874466 10876496|10875743 TAGCTT 6mer3-8 dme-miR-79-3p 3L + 10875261 10875291 5'utr tna FlyBase G22317.1 ATTAAAAGTAAATGATTTAGCTTGGTAAACG 15 10875277 0.642842143 4 15 96 1 1.397940009 0.4 0.466666667 0.68 15 0 0 25 3L:10875261-10875291 6 17 2282 FBgn0026160 929.45 23.40666667 36.18333333 0.018290387 0.726288807 0.469829572 1 1 1 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3L 10895050 10895056 - 3L_10895050_10895056_- 0.443131018 0.443131018 0.443131018 0 Aps FBtr0076250|FBtr0076252 10894774|10894774 10896130|10896130 3L - 10895020 10895080 3'utr Aps FlyBase G35978.1 CGAAGAAGAGGAGCATGTTATCAATGTGATTTAAGAGATACAAGATACATACGAGTTAAAC 84 10895050 0.984960126 6 81 653 0.972222222 1.720159303 0.240740741 0.226190476 0.398148148 84 2 1 105 3L:10895020-10895080 7 Aps FBtr0076252|FBtr0076250 10894774|10894774 10896130|10896130 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 10895029 10895078 3'utr Aps FlyBase G27212.1 AAGAAGAGGAGCATGTTATCAATGTGATTTAAGAGATACAAGATACATAC 62 10895050 0.937353226 6 58 478 0.928571429 1.892094603 0.261904762 0.241935484 0.44047619 62 6 0 78 3L:10895029-10895078 7 72 2283 FBgn0036111 1989.25 99.36 152.7433333 0.036194546 0.724637681 0.471379002 -6 -6 -6 0.01 dme-miR-968-5p 6mer3-8 ACTACT 3L 10895162 10895167 - 3L_10895162_10895167_- 1 1 1 0 Aps FBtr0076250|FBtr0076252 10894774|10894774 10896130|10896130 3L - 10895138 10895181 3'utr Aps FlyBase G35980.1 TATGAACTAATTCAACTACTAAGATACGTGCACGTTGTACTTTT 5 10895164 0.987905902 4 4 36 0.833333333 0.698970004 0 0.2 0.333333333 5 1 0 5 3L:10895138-10895181 6 Aps FBtr0076252|FBtr0076250 10894774|10894774 10896130|10896130 ACTACT 6mer3-8 dme-miR-968-5p 3L - 10895128 10895183 3'utr Aps FlyBase G27213.1 ATTATGAACTAATTCAACTACTAAGATACGTGCACGTTGTACTTTTCAGATGCAAA 6 10895162 0.966027961 4 6 33 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 3L:10895128-10895183 6 4 2284 FBgn0036111 1989.25 99.36 152.7433333 0.002010808 0.040257649 0.026187722 -3 -5 -4 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 11059589 11059594 - 3L_11059589_11059594_- 1 1 1 0 CG6321 FBtr0076242 11059435 11059678 3L - 11059575 11059614 3'utr CG6321 FlyBase G35994.1 TTTAAATATGACTTAAAAGGATGTGACTGTGCACTAAACT 6 11059591 0.792210932 3 6 33 1 0.77815125 0 0 0 6 0 0 6 3L:11059575-11059614 6 CG6321 FBtr0076242 11059435 11059678 ATGTGA 6mer3-8 dme-miR-1003-3p 3L - 11059567 11059607 3'utr CG6321 FlyBase G27224.1 ATGACTTAAAAGGATGTGACTGTGCACTAAACTACTTATCA 5 11059592 0.952780089 3 5 27 1 0.84509804 0 0.2 0.428571429 5 0 0 7 3L:11059567-11059607 6 5 2285 FBgn0036117 179.99 13.81333333 21.14333333 0.027779321 0.361969112 0.23648116 -3 -2 -2.5 0.01 dme-bantam-3p 7mer-A1 GATCTCA 3L 11065892 11065898 + 3L_11065892_11065898_+ 0.823349562 0.823349562 0.823349562 0 CG45101 FBtr0344636 11065373 11069025 3L + 11065871 11065945 3'utr CG45101 FlyBase G29508.1 AGCCAACTACGGAGCATTGGAGATCTCAGTCGCCTCAAGTTCGACTACATTATGGTGGATAATCGGGGGCATTCG 29 11065887 0.762199209 7 28 169 0.96875 1.491361694 0.21875 0.103448276 0.1875 29 1 0 31 3L:11065871-11065945 7 CG45101 FBtr0344636 11065373 11069025 GATCTCA 7mer-A1 dme-bantam-3p 3L + 11065868 11065907 3'utr CG45101 FlyBase G22330.1 TGGAGCCAACTACGGAGCATTGGAGATCTCAGTCGCCTCA 13 11065887 0.766055596 4 13 60 1 1.255272505 0.111111111 0.307692308 0.5 13 0 0 18 3L:11065868-11065907 7 17 2286 FBgn0266540 111.74 3.59 5.523333333 0.152138894 4.735376045 3.077851539 5 5 5 0.01 dme-bantam-3p 6mer2-7 GATCTC 3L 11066225 11066230 + 3L_11066225_11066230_+ 1 1 1 0 CG45101 FBtr0344636 11065373 11069025 3L + 11066211 11066235 3'utr CG45101 FlyBase G29509.1 TCAGTAAGCGCATAGATCTCGAGGA 6 11066223 0.758607848 2 4 18 0.857142857 0.77815125 0.571428571 0.166666667 0.285714286 6 1 0 6 3L:11066211-11066235 6 CG45101 FBtr0344636 11065373 11069025 GATCTC 6mer2-7 dme-bantam-3p 3L + 11066211 11066238 3'utr CG45101 FlyBase G22332.1 TCAGTAAGCGCATAGATCTCGAGGAATA 7 11066223 0.896611907 2 5 24 0.8 1.079181246 0 0.857142857 0.933333333 7 3 0 12 3L:11066211-11066238 6 6.5 2287 FBgn0266540 111.74 3.59 5.523333333 0.058170754 1.810584958 1.176825588 2 2 2 0.01 dme-bantam-3p 8mer-A1 TGATCTCA 3L 11066820 11066827 + 3L_11066820_11066827_+ 0.631136385 0.631136385 0.631136385 0 CG45101 FBtr0344636 11065373 11069025 3L + 11066791 11066844 3'utr CG45101 FlyBase G29510.1 AGCAAAAAAACGTCACCGCGCAAAAAAGCTGATCTCACCGATTCCGAAGAGGAT 26 11066820 0.919586977 3 24 79 0.933333333 1.447158031 0.4 0.115384615 0.233333333 26 2 0 28 3L:11066791-11066844 8 CG45101 FBtr0344636 11065373 11069025 TGATCTCA 8mer-A1 dme-bantam-3p 3L + 11066799 11066839 3'utr CG45101 FlyBase G22333.1 AACGTCACCGCGCAAAAAAGCTGATCTCACCGATTCCGAAG 16 11066820 0.920649309 3 16 39 1 1.322219295 0.238095238 0.25 0.428571429 16 0 0 21 3L:11066799-11066839 8 21 2288 FBgn0266540 111.74 3.59 5.523333333 0.187936281 5.849582173 3.802051901 0 0 0 0.01 dme-miR-307a-3p 6mer2-7 GTTGTG 3L 11079930 11079935 - 3L_11079930_11079935_- 1 1 1 0 JIL-1 FBtr0332707|FBtr0076237 11078750|11078750 11080622|11080622 3L - 11079913 11080039 5'utr JIL-1 FlyBase G36018.1 AAGATTTGCAATTAGTTTAGTGCAAAATTATGATTAAGACAAAATTGAGAAAGATATTCTTAGGGCGCCTATATTATATACACTACACACACAGTTTGCTTTTAGTTGTGCTTTATGTTAAGTTATA 59 11079927 0.990652986 16 57 585 0.95890411 1.367976785 0.109589041 0.186440678 0.342465753 59 1 2 70 3L:11079913-11080039 6 JIL-1 FBtr0076237|FBtr0332707 11078750|11078750 11080622|11080622 GTTGTG 6mer2-7 dme-miR-307a-3p 3L - 11079912 11079948 5'utr JIL-1 FlyBase G27235.1 CAGTTTGCTTTTAGTTGTGCTTTATGTTAAGTTATAT 18 11079927 0.75766104 3 18 212 1 1.462397998 0.137931034 0.444444444 0.655172414 18 0 0 29 3L:11079912-11079948 6 30.5 2289 FBgn0020412 872.0633333 16.06666667 24.67666667 0.034974524 1.898340249 1.235985411 -8 -8 -8 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3L 11112028 11112033 + 3L_11112028_11112033_+ 1 1 1 0 CG7638 FBtr0076210 11111863 11112117 3L + 11112014 11112063 3'utr CG7638 FlyBase G29528.1 TAAAGTGTGTTTTAAAGACTTTTAACCAGGCTGCCCGGAGAGTAACCAAA 35 11112035 0.819411551 5 35 252 1 1.612783857 0.243902439 0.171428571 0.292682927 35 0 0 41 3L:11112014-11112063 6 CG7638 FBtr0076210 11111863 11112117 AAGACT 6mer3-8 dme-miR-14-3p 3L + 11111992 11112062 3'utr CG7638 FlyBase G22341.1 ATACTACCTAACTCATTGTTTATAAAGTGTGTTTTAAAGACTTTTAACCAGGCTGCCCGGAGAGTAACCAA 30 11112035 0.750377306 5 28 232 0.926829268 1.579783597 0.219512195 0.366666667 0.536585366 30 3 0 38 3L:11111992-11112062 6 27 2290 FBgn0036133 348.3333333 22.38666667 34.17666667 0.077511962 1.206075045 0.790012679 -7 -7 -7 0.01 dme-miR-1006-3p 6mer2-7 GAATTT 3L 11114974 11114979 - 3L_11114974_11114979_- 1 1 1 0 fd68A FBtr0300785|FBtr0300786|FBtr0300784|FBtr0301967|FBtr0300783|FBtr0332654|FBtr0332653|FBtr0332652 11114268|11114167|11114167|11114167|11114268|11114268|11114167|11114167 11115084|11115084|11115084|11115084|11115084|11115084|11115084|11115042 3L - 11114967 11115009 3'utr fd68A FlyBase G36059.1 AAACAAAAAAGTATCTCCATCTTGTATATTGAATTTGCCAATC 8 11114997 0.977652188 5 6 77 0.777777778 0.84509804 0 0.125 0.222222222 8 2 0 7 3L:11114967-11115009 6 fd68A FBtr0332652|FBtr0332653|FBtr0332654|FBtr0300783|FBtr0301967|FBtr0300784|FBtr0300786|FBtr0300785 11114167|11114167|11114268|11114268|11114167|11114167|11114167|11114268 11115042|11115084|11115084|11115084|11115084|11115084|11115084|11115084 GAATTT 6mer2-7 dme-miR-1006-3p 3L - 11114970 11115006 3'utr fd68A FlyBase G27261.1 CAAAAAAGTATCTCCATCTTGTATATTGAATTTGCCA 8 11114987 0.883761298 5 6 70 0.875 0.84509804 0 0.5 0.75 8 1 1 14 3L:11114970-11115006 6 7 2291 FBgn0036134 852.62 30.46666667 46.7 0.008209988 0.2297593 0.149892934 18 8 13 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 3L 11167055 11167060 - 3L_11167055_11167060_- 1 1 1 0 wls FBtr0076218|FBtr0076218|FBtr0076219|FBtr0076219 11166618|11166618|11166618|11166618 11167228|11167228|11167228|11167228 3L - 11166933 11167321 stop_codon wls FlyBase G36077.1 GAGGAGATCGAGTTCAGTCACCTGCCATCGGACTCCAATCCCAGCGAGATCTCCTCACTCACCTCGTTCACACGCAAGGTGGCCTTCGATTAGGCGGAAGGACTCGAATTATTGTTTTCTAAAGGGTTGTGTGCCAAACTGAGATCACAATTTGGCCTGCAGCCGCAACGCTTAAAGTGTGTGCTCATTTAATTACCATAGTCAGTAGCATTTCTTGCCTAGTTTTGCATTCTGTGCATTCGACAACGCGATCAGCATTATTACTTATCATTAACATATAGATTGTCTAGTTTTTCACAGCATGCTCAAAGTGTACGATTTTATCAAATGTATTTTTATGTATGCGCCTCGGCAGTATTATCTATTGATGTCCAATTGTGCTAGCTTGT 291 11167070 0.990342315 54 275 2124 0.937313433 1.542687139 0.244776119 0.130584192 0.244776119 291 13 8 314 3L:11166933-11167321 6 wls FBtr0076218|FBtr0076218|FBtr0076219|FBtr0076219 11166618|11166618|11166618|11166618 11167228|11167228|11167228|11167228 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 3L - 11167044 11167089 3'utr wls FlyBase G27275.1 TGTGCATTCGACAACGCGATCAGCATTATTACTTATCATTAACATA 86 11167070 0.985164588 8 80 499 0.963768116 2.123851641 0.239130435 0.418604651 0.637681159 86 5 0 133 3L:11167044-11167089 6 134 2292 FBgn0036141 290.3333333 14.00666667 21.44333333 0.461538462 9.566872918 6.249028447 10 10 10 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 3L 11177312 11177317 - 3L_11177312_11177317_- 0.971732432 0.927036146 0.949384289 0.031605057 GlcAT-P FBtr0076190|FBtr0306254|FBtr0076189|FBtr0100422|FBtr0306255 11176952|11176952|11176952|11176952|11176952 11178417|11178417|11178417|11178417|11178417 3L - 11177281 11177353 3'utr GlcAT-P FlyBase G36084.1 CAAGTCCCGCTAAAGCAGGGAGATGCGCAGGGATTGGAAAAAACTCTGACAAATGGTATTACGAGATTTATAC 15 11177300 0.940490166 6 15 65 1 1.255272505 0.222222222 0.133333333 0.277777778 15 0 0 18 3L:11177281-11177353 6 GlcAT-P FBtr0076190|FBtr0306255|FBtr0100422|FBtr0076189|FBtr0306254 11176952|11176952|11176952|11176952|11176952 11178417|11178417|11178417|11178417|11178417 GAAAAA 6mer3-8 dme-miR-980-5p 3L - 11177225 11177337 3'utr GlcAT-P FlyBase G27277.1 AGGGAGATGCGCAGGGATTGGAAAAAACTCTGACAAATGGTATTACGAGATTTATACAATTTATACAATTGAATATGGAATGCGATGTGCCGCAAAGACATTAGTTAGGTACT 16 11177300 0.999767033 9 15 78 0.95 1.278753601 0.05 0.25 0.4 16 1 0 19 3L:11177225-11177337 6 9 2293 FBgn0036144 1851.176667 64.88333333 98.86 0.004861773 0.138710506 0.091037831 -17 -17 -17 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3L 11177482 11177487 - 3L_11177482_11177487_- 0.997714156 0.999999998 0.998857077 0.001616305 GlcAT-P FBtr0076190|FBtr0306254|FBtr0076189|FBtr0100422|FBtr0306255 11176952|11176952|11176952|11176952|11176952 11178417|11178417|11178417|11178417|11178417 3L - 11177475 11177582 3'utr GlcAT-P FlyBase G36086.1 AATTTCATCCTAAACGCTGCACGATTTTTTGTCGAATGAGAACTACTTTTTGTATACCTAAGATATGCGTTTTGTTCTTCGTCCGAAACGGGTTTCCAAAGCAAAACT 20 11177505 0.977013022 11 18 155 0.958333333 1.361727836 0.416666667 0.15 0.291666667 20 1 0 23 3L:11177475-11177582 6 GlcAT-P FBtr0076190|FBtr0306255|FBtr0100422|FBtr0076189|FBtr0306254 11176952|11176952|11176952|11176952|11176952 11178417|11178417|11178417|11178417|11178417 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 11177472 11177538 3'utr GlcAT-P FlyBase G27279.1 ACTTTTTGTATACCTAAGATATGCGTTTTGTTCTTCGTCCGAAACGGGTTTCCAAAGCAAAACTTTT 24 11177505 0.980961886 6 23 172 1 1.62324929 0.619047619 0.5 0.714285714 24 0 0 42 3L:11177472-11177538 6 5 2294 FBgn0036144 1851.176667 64.88333333 98.86 0.002700985 0.077061392 0.050576573 18 18 18 0.01 dme-miR-932-5p 7mer-A1 GAATTGA 3L 11178282 11178288 - 3L_11178282_11178288_- 0.823349562 0.823349562 0.823349562 0 GlcAT-P FBtr0076190|FBtr0306254|FBtr0076189|FBtr0100422|FBtr0306255 11176952|11176952|11176952|11176952|11176952 11178417|11178417|11178417|11178417|11178417 3L - 11178246 11178320 3'utr GlcAT-P FlyBase G36087.2 AGGTACAATCCGGCGCACGGAGATACCAATCAGAATTGATCAGATCATTAGTCGGTGTACATTATTATCATAATC 78 11178285 0.736333693 10 72 412 0.948979592 1.667452953 0.214285714 0.207792208 0.37755102 77 4 1 93 3L:11178246-11178320 7 GlcAT-P FBtr0076190|FBtr0306255|FBtr0100422|FBtr0076189|FBtr0306254 11176952|11176952|11176952|11176952|11176952 11178417|11178417|11178417|11178417|11178417 GAATTGA 7mer-A1 dme-miR-932-5p 3L - 11178167 11178318 3'utr GlcAT-P FlyBase G27282.2 GTACAATCCGGCGCACGGAGATACCAATCAGAATTGATCAGATCATTAGTCGGTGTACATTATTATCATAATCATATGATTAGTTAGGCTCTAAGCGCACACATACCTATGATAATTCTTTGCACCGTAGTCTTTGTTTGTTCGCACACCTA 77 11178285 0.746255967 19 73 461 0.930434783 2.029383778 0.156521739 0.363636364 0.573913043 77 8 0 107 3L:11178167-11178318 7 61.5 2295 FBgn0036144 1851.176667 64.88333333 98.86 0.033222113 0.947855125 0.622091847 -3 -3 -3 0.01 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3L 11227854 11227859 + 3L_11227854_11227859_+ 0.999986086 0.999996958 0.999991522 7.71E-06 CG42671 FBtr0304934|FBtr0302699|FBtr0302696|FBtr0302697|FBtr0330283|FBtr0339906|FBtr0304933 11227708|11227708|11227708|11227708|11227741|11227708|11227708 11229635|11228546|11228546|11228546|11228546|11230512|11229635 3L + 11227832 11227881 3'utr CG42671 FlyBase G29560.1 AAACATGCCACACGATCTAACATGGTGCAAGCAGCAGCGGCAGCAGCAGA 33 11227854 0.908619258 2 31 97 0.976190476 1.311753861 0.523809524 0.151515152 0.333333333 33 0 1 41 3L:11227832-11227881 6 CG42671 FBtr0302696|FBtr0302699|FBtr0304934|FBtr0304933|FBtr0339906|FBtr0330283|FBtr0302697 11227708|11227708|11227708|11227708|11227708|11227741|11227708 11228546|11228546|11229635|11229635|11230512|11228546|11228546 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3L + 11227836 11227876 3'utr CG42671 FlyBase G22362.1 ATGCCACACGATCTAACATGGTGCAAGCAGCAGCGGCAGCA 20 11227854 0.907060548 2 20 63 1 1.579783597 0.473684211 0.55 0.763157895 20 0 0 38 3L:11227836-11227876 6 26 2296 FBgn0261553 751.82 16.21 24.91666667 0.034582746 1.60394818 1.043478261 0 0 0 0.01 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3L 11229809 11229814 + 3L_11229809_11229814_+ 0.999999993 0.999999999 0.999999996 0 CG42671 FBtr0345849|FBtr0339906|FBtr0339907 11229352|11227708|11229352 11230745|11230512|11230512 3L + 11229789 11229834 3'utr CG42671 FlyBase G29563.1 TATTCTAGCATTGTCGACTTTGGTGCAAATAACTTAAATATTATAC 33 11229809 0.751763781 4 32 278 0.975 1.591064607 0.1 0.181818182 0.325 33 1 0 39 3L:11229789-11229834 6 CG42671 FBtr0345849|FBtr0339907|FBtr0339906 11229352|11229352|11227708 11230745|11230512|11230512 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3L + 11229787 11229828 3'utr CG42671 FlyBase G22366.1 GATATTCTAGCATTGTCGACTTTGGTGCAAATAACTTAAATA 29 11229808 0.761275036 3 27 230 0.975 1.591064607 0.175 0.310344828 0.5 29 1 0 39 3L:11229787-11229828 6 30.5 2297 FBgn0261553 751.82 16.21 24.91666667 0.040568221 1.881554596 1.224080268 0 1 0.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 3L 11254488 11254493 + 3L_11254488_11254493_+ 1 1 1 0 scyl FBtr0076168|FBtr0339908 11254474|11254474 11255243|11256172 3L + 11254435 11254665 stop_codon scyl FlyBase G29573.2 CCCATAGACCCAGTGCGGCCATCGCCACGCCCACCAACTAATGGTGATCAGCTTGATCTGTCAGATATGCATATGTTCGTATATGTGTCTGCGCGAAACAAAAAAAACACCACCCCTGTGATGATCGAGAGCAGTAGTTTGTTGCAGTTTGAAGTGCAACAACGAAGCAAGTATTCGAAGCCACCCCACCTACACCACACACACACACACACAAACACCTTTAATACACAC 974 11254488 0.826653055 34 923 7015 0.937552743 1.966532813 0.401687764 0.169404517 0.317299578 974 63 11 1111 3L:11254435-11254665 6 scyl FBtr0076168|FBtr0339908 11254474|11254474 11255243|11256172 TGATCT 6mer3-8 dme-bantam-3p 3L + 11254433 11254530 stop_codon scyl FlyBase G22379.1 CGCCCATAGACCCAGTGCGGCCATCGCCACGCCCACCAACTAATGGTGATCAGCTTGATCTGTCAGATATGCATATGTTCGTATATGTGTCTGCGCGA 530 11254488 0.919211239 16 507 4036 0.955762515 1.914343157 0.464493597 0.435849057 0.651920838 530 29 9 821 3L:11254433-11254530 6 655.5 2298 FBgn0041094 3053.616667 135.47 208.0166667 0.214663486 4.838709677 3.151189809 0 0 0 0.01 dme-miR-252-5p 7mer-m1 TACTTAG 3L 11254795 11254801 + 3L_11254795_11254801_+ 0.702971752 0.702971752 0.702971752 0 scyl FBtr0076168|FBtr0339908 11254474|11254474 11255243|11256172 3L + 11254692 11254867 3'utr scyl FlyBase G29574.1 ACACACACATACACATTAGGTTACGCCAACCACACTCTCATACTAATACTATATATGGGACCGTAAGGCCCGATTTTTGTAATTGTGACTCTCACCACCATTTTACTTAGATGCGTAGTGCTATAACAAATAACTAGAGTTTTAAGTTGTTTCTCCTTTTTCAAAAACGCAAAAGC 157 11254774 0.981559038 31 151 1170 0.963350785 1.963787827 0.041884817 0.178343949 0.32460733 157 6 1 184 3L:11254692-11254867 7 scyl FBtr0076168|FBtr0339908 11254474|11254474 11255243|11256172 TACTTAG 7mer-m1 dme-miR-252-5p 3L + 11254690 11254829 3'utr scyl FlyBase G22381.1 ACACACACACATACACATTAGGTTACGCCAACCACACTCTCATACTAATACTATATATGGGACCGTAAGGCCCGATTTTTGTAATTGTGACTCTCACCACCATTTTACTTAGATGCGTAGTGCTATAACAAATAACTAGA 105 11254775 0.813471592 20 97 734 0.919463087 1.534660576 0.060402685 0.323809524 0.523489933 105 9 3 137 3L:11254690-11254829 7 17.5 2299 FBgn0041094 3053.616667 135.47 208.0166667 0.005730909 0.129179892 0.084127874 21 20 20.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 11255018 11255024 + 3L_11255018_11255024_+ 0.754178804 0.754178804 0.754178804 0 scyl FBtr0076168|FBtr0076168|FBtr0076168|FBtr0339908|FBtr0339908|FBtr0339908 11254474|11254474|11254474|11254474|11254474|11254474 11255243|11255243|11255243|11256172|11256172|11256172 3L + 11254967 11255101 3'utr scyl FlyBase G29576.1 ATATTTCTGGGGCATTCGCTTTGGGGCTCGCCGGTCGACAACTCATGAATATGTGATACTGTTTAAGATGCTAAGAGTTTTTTGCCGGATGCACCAAAGTCCGGCAAAAGACGTTGATAAAATTACACATAACAC 379 11255013 0.814937502 27 324 2884 0.860759494 2.133538908 0.297468354 0.213720317 0.371308017 379 64 2 408 3L:11254967-11255101 7 scyl FBtr0076168|FBtr0076168|FBtr0076168|FBtr0339908|FBtr0339908|FBtr0339908 11254474|11254474|11254474|11254474|11254474|11254474 11255243|11255243|11255243|11256172|11256172|11256172 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 11254915 11255103 3'utr scyl FlyBase G22383.1 AAACCAACATGAAATTCAAAGACGACAGCCCCACGAATCAATCCCCAGAATCATATTTCTGGGGCATTCGCTTTGGGGCTCGCCGGTCGACAACTCATGAATATGTGATACTGTTTAAGATGCTAAGAGTTTTTTGCCGGATGCACCAAAGTCCGGCAAAAGACGTTGATAAAATTACACATAACACAC 313 11255013 0.999641769 30 260 2304 0.834728033 1.822821645 0.336820084 0.370607029 0.587866109 313 74 5 399 3L:11254915-11255103 7 240.5 2300 FBgn0041094 3053.616667 135.47 208.0166667 0.078759067 1.775300805 1.156157359 5 5 5 0.01 dme-bantam-3p 6mer3-8 TGATCT 3L 11255249 11255254 + 3L_11255249_11255254_+ 1 1 1 0 scyl FBtr0339908 11254474 11256172 3L + 11255198 11255347 3'utr scyl FlyBase G29578.1 AATTGTATGCTATATAGTAATAAACAAAGAAACCAACAAAACAAACAAACTTGATCTTGGTAAATTTAAAATTTAACTTTAAAACTGAGAGAGATGAGGGCCTCGAACTGTGAAAGAGGTAGATGATCACACGCTCCAATTTTAGTTAGA 776 11255249 0.925336931 25 730 4868 0.950052029 1.638251483 0.043704475 0.176546392 0.335067638 776 28 20 913 3L:11255198-11255347 6 scyl FBtr0339908 11254474 11256172 TGATCT 6mer3-8 dme-bantam-3p 3L + 11255235 11255366 3'utr scyl FlyBase G22384.1 AAAACAAACAAACTTGATCTTGGTAAATTTAAAATTTAACTTTAAAACTGAGAGAGATGAGGGCCTCGAACTGTGAAAGAGGTAGATGATCACACGCTCCAATTTTAGTTAGACGCAGCTTGCTGCAATAAA 603 11255249 0.872144453 28 570 3535 0.947194719 1.573275315 0.053905391 0.354892206 0.572057206 603 26 22 861 3L:11255235-11255366 6 565.5 2301 FBgn0041094 3053.616667 135.47 208.0166667 0.185190239 4.174355946 2.718532169 0 0 0 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 11255584 11255589 + 3L_11255584_11255589_+ 1 1 1 0 scyl FBtr0339908 11254474 11256172 3L + 11255549 11255676 3'utr scyl FlyBase G29580.1 AAGCATAAAATTTAAGGCAATGAATATCTCAGTAAATGTGAAAGCGTAAAAAATTTGTAAAATTTTTTTGTCTGTGTAAAAACTCCCAATGCGATATGAAAACAAAAACTTAAATGTAGCTGCAAAAA 193 11255581 0.925267651 13 186 1116 0.953974895 1.512836807 0.058577406 0.196891192 0.351464435 193 5 6 228 3L:11255549-11255676 6 scyl FBtr0339908 11254474 11256172 ATGTGA 6mer3-8 dme-miR-1003-3p 3L + 11255561 11255603 3'utr scyl FlyBase G22387.1 TAAGGCAATGAATATCTCAGTAAATGTGAAAGCGTAAAAAATT 123 11255581 0.776072078 7 114 714 0.940540541 1.763427994 0.021621622 0.333333333 0.556756757 123 9 2 174 3L:11255561-11255603 6 133.5 2302 FBgn0041094 3053.616667 135.47 208.0166667 0.043718651 0.985458035 0.641775499 3 3 3 0.01 dme-miR-980-5p 7mer-m8 GAAAAAC 3L 11255873 11255879 + 3L_11255873_11255879_+ 0.705949576 0.705949576 0.705949576 0 scyl FBtr0339908 11254474 11256172 3L + 11255823 11255941 3'utr scyl FlyBase G29582.1 ACAAACACACACGAAAGTATCTATTACCAGCAAAAAGTATCTATCAAAGCGAAAAACCTATTTATTACAAAAAGAGAGAGAGAGAGAAAGAAATAAACAAGCAAAATACGAAAAAAATA 29 11255864 0.999869779 11 27 101 0.9375 1.176091259 0.125 0.103448276 0.1875 29 1 1 30 3L:11255823-11255941 7 scyl FBtr0339908 11254474 11256172 GAAAAAC 7mer-m8 dme-miR-980-5p 3L + 11255830 11255960 3'utr scyl FlyBase G22388.2 CACACGAAAGTATCTATTACCAGCAAAAAGTATCTATCAAAGCGAAAAACCTATTTATTACAAAAAGAGAGAGAGAGAGAAAGAAATAAACAAGCAAAATACGAAAAAAATACATGTATTAATTTTTTATT 35 11255847 0.967835434 11 24 110 0.722222222 0.892094603 0.259259259 0.457142857 0.648148148 35 11 4 39 3L:11255830-11255960 7 7.5 2303 FBgn0041094 3053.616667 135.47 208.0166667 0.002456104 0.055362811 0.036054803 9 26 17.5 0.01 dme-miR-1003-3p 7mer-A1 TGTGAGA 3L 11256039 11256045 + 3L_11256039_11256045_+ 0.823349562 0.823349562 0.823349562 0 scyl FBtr0339908 11254474 11256172 3L + 11256013 11256061 3'utr scyl FlyBase G29583.1 TTTATTGCGTAAAACAACAAAATAATTGTGAGAAATTTGTAACCAAAAC 25 11256038 0.698190375 5 25 143 1 1.505149978 0.25 0.16 0.34375 25 0 0 32 3L:11256013-11256061 7 scyl FBtr0339908 11254474 11256172 TGTGAGA 7mer-A1 dme-miR-1003-3p 3L + 11256020 11256062 3'utr scyl FlyBase G22389.1 CGTAAAACAACAAAATAATTGTGAGAAATTTGTAACCAAAACA 23 11256038 0.962665033 2 23 122 1 1.51851394 0.181818182 0.391304348 0.575757576 23 0 0 33 3L:11256020-11256062 7 24 2304 FBgn0041094 3053.616667 135.47 208.0166667 0.007859533 0.177160995 0.115375371 1 1 1 0.01 dme-miR-932-5p 7mer-A1 GAATTGA 3L 11288177 11288183 - 3L_11288177_11288183_- 0.731659037 0.731659037 0.731659037 0 CG6175 FBtr0076183|FBtr0333389|FBtr0333388 11287934|11287934|11287934 11288850|11288850|11288850 3L - 11288157 11288193 3'utr CG6175 FlyBase G36135.1 AAACGAACGCGAATTGATTGCAAAATGTCTACATGTA 11 11288179 0.959792709 2 11 62 1 1.079181246 0 0.090909091 0.166666667 11 0 0 12 3L:11288157-11288193 7 CG6175 FBtr0333389|FBtr0333388|FBtr0076183 11287934|11287934|11287934 11288850|11288850|11288850 GAATTGA 7mer-A1 dme-miR-932-5p 3L - 11288157 11288190 3'utr CG6175 FlyBase G27317.1 CGAACGCGAATTGATTGCAAAATGTCTACATGTA 5 11288179 0.864773898 3 5 27 1 0.903089987 0.625 0.4 0.625 5 0 0 8 3L:11288157-11288190 7 8 2305 FBgn0036152 153.01 4.68 7.153333333 0.052284164 1.709401709 1.118359739 -4 -4 -4 0.01 dme-miR-980-3p 6mer3-8 GGCAGC 3L 1140740 1140745 - 3L_1140740_1140745_- 1 1 1 0 bab2 FBtr0333271|FBtr0072639 1140427|1140427 1141967|1141967 3L - 1140731 1140761 3'utr bab2 FlyBase G33217.1 ATGGGCAAACAACGCAGGCAGCATCACATTA 15 1140738 0.901957716 2 15 14 1 1.230448921 0.176470588 0.133333333 0.235294118 15 0 0 17 3L:1140731-1140761 6 bab2 FBtr0333271|FBtr0072639 1140427|1140427 1141967|1141967 GGCAGC 6mer3-8 dme-miR-980-3p 3L - 1140705 1140763 3'utr bab2 FlyBase G25133.1 GAATGGGCAAACAACGCAGGCAGCATCACATTAAATTTGTGCTAATTTTATGTAAACAA 10 1140738 0.931752518 3 10 36 1 1.255272505 0.444444444 0.4 0.666666667 10 0 0 18 3L:1140705-1140763 6 11 2306 FBgn0025525 40 0.97 1.503333333 0.275 11.34020619 7.317073171 -7 -7 -7 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 3L 1141097 1141103 - 3L_1141097_1141103_- 0.620204266 0.620204266 0.620204266 0 bab2 FBtr0333271|FBtr0072639 1140427|1140427 1141967|1141967 3L - 1141083 1141124 3'utr bab2 FlyBase G33220.1 AAAGTTACGATTAGAGACTTGTGCATTTCTTAAATGTAGCTT 9 1141103 0.975095415 3 9 61 1 1 0 0.111111111 0.2 9 0 0 10 3L:1141083-1141124 7 bab2 FBtr0333271|FBtr0072639 1140427|1140427 1141967|1141967 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 1141067 1141131 3'utr bab2 FlyBase G25135.1 AAACATTAAAGTTACGATTAGAGACTTGTGCATTTCTTAAATGTAGCTTAACCCTAGAATAGCCC 11 1141104 0.982455407 6 11 84 1 1.204119983 0.0625 0.363636364 0.5625 11 0 0 16 3L:1141067-1141131 7 9 2307 FBgn0025525 40 0.97 1.503333333 0.225 9.278350515 5.986696231 0 1 0.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 3L 11495244 11495249 + 3L_11495244_11495249_+ 1 1 1 0 chrb FBtr0076093|FBtr0344910 11495094|11495094 11499055|11499055 3L + 11495178 11495267 3'utr chrb FlyBase G29589.1 AACAGCAGCAATCGCAATACGAACATCTATTGGTTGTGCCTCCTTCGTCGCAATAGCCAAGATTCATGATCTTCATTATGGAATATAGAG 31 11495244 0.986331879 7 28 244 0.974358974 1.579783597 0.333333333 0.258064516 0.41025641 31 1 0 38 3L:11495178-11495267 6 chrb FBtr0076093|FBtr0344910 11495094|11495094 11499055|11499055 TGATCT 6mer3-8 dme-bantam-3p 3L + 11495223 11495294 3'utr chrb FlyBase G22393.1 CGTCGCAATAGCCAAGATTCATGATCTTCATTATGGAATATAGAGAGATGATGTTTAACCCTAGAGGCAAAC 14 11495244 0.989054931 3 13 108 0.952380952 1.301029996 0.142857143 0.285714286 0.523809524 14 1 0 20 3L:11495223-11495294 6 18.5 2308 FBgn0036165 903.39 19.18 29.98 0.02047842 0.964546403 0.617078052 0 0 0 0.01 dme-miR-970-3p 6mer3-8 TCTTAT 3L 11495452 11495457 + 3L_11495452_11495457_+ 1 1 1 0 chrb FBtr0076093|FBtr0344910 11495094|11495094 11499055|11499055 3L + 11495433 11495483 3'utr chrb FlyBase G29590.1 GTTGCAGGCAACTCAAAACTCTTATTGGACTGACTTTTTGGCTTAAACAAA 22 11495457 0.968234352 4 21 204 0.964285714 1.431363764 0 0.181818182 0.357142857 22 1 0 27 3L:11495433-11495483 6 chrb FBtr0076093|FBtr0344910 11495094|11495094 11499055|11499055 TCTTAT 6mer3-8 dme-miR-970-3p 3L + 11495443 11495482 3'utr chrb FlyBase G22394.1 ACTCAAAACTCTTATTGGACTGACTTTTTGGCTTAAACAA 14 11495457 0.758181299 3 14 118 1 1.230448921 0 0.142857143 0.294117647 14 0 0 17 3L:11495443-11495482 6 18 2309 FBgn0036165 903.39 19.18 29.98 0.019924949 0.938477581 0.600400267 -5 -5 -5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 11496018 11496024 + 3L_11496018_11496024_+ 0.754178804 0.754178649 0.754178726 1.41E-07 chrb FBtr0076093|FBtr0076093|FBtr0076093|FBtr0344910|FBtr0344910|FBtr0344910 11495094|11495094|11495094|11495094|11495094|11495094 11499055|11499055|11499055|11499055|11499055|11499055 3L + 11495994 11496040 3'utr chrb FlyBase G29591.1 TAACAAATATAAAAACAAAGTTGATGTGATATTATATAATAATTATG 53 11496015 0.851912783 6 51 498 0.965517241 1.748188027 0.034482759 0.075471698 0.155172414 53 2 0 56 3L:11495994-11496040 7 chrb FBtr0076093|FBtr0076093|FBtr0076093|FBtr0344910|FBtr0344910|FBtr0344910 11495094|11495094|11495094|11495094|11495094|11495094 11499055|11499055|11499055|11499055|11499055|11499055 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 11495959 11496040 3'utr chrb FlyBase G22395.1 TCGATCAATCGAGGCAGAAAGAGGAAAGTTAATAATAACAAATATAAAAACAAAGTTGATGTGATATTATATAATAATTATG 43 11496015 0.989287264 8 39 372 0.933333333 1.748188027 0.05 0.372093023 0.55 43 4 0 56 3L:11495959-11496040 7 46 2310 FBgn0036165 903.39 19.18 29.98 0.050919315 2.398331595 1.534356237 3 3 3 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3L 11496820 11496825 + 3L_11496820_11496825_+ 1 1 1 0 chrb FBtr0076093|FBtr0344910 11495094|11495094 11499055|11499055 3L + 11496805 11496841 3'utr chrb FlyBase G29592.1 AAATATAAAGTCATCTGTGTTAATAAATTTTAAAATA 9 11496818 0.827834511 2 7 76 0.923076923 1.079181246 0 0.222222222 0.461538462 9 1 0 12 3L:11496805-11496841 6 chrb FBtr0076093|FBtr0344910 11495094|11495094 11499055|11499055 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 11496806 11496830 3'utr chrb FlyBase G22396.1 AATATAAAGTCATCTGTGTTAATAA 5 11496819 0.68393326 2 5 35 1 0.84509804 0 0.4 0.571428571 5 0 0 7 3L:11496806-11496830 6 6.5 2311 FBgn0036165 903.39 19.18 29.98 0.007195121 0.338894682 0.216811207 2 1 1.5 0.01 dme-miR-184-5p 6mer3-8 TGATAA 3L 11497179 11497184 + 3L_11497179_11497184_+ 0.999999285 1 0.999999642 4.95E-07 chrb FBtr0076093|FBtr0344910 11495094|11495094 11499055|11499055 3L + 11497131 11497235 3'utr chrb FlyBase G29593.1 AATCAATCCCACAAAGATCTCGACTAATAAGATGAAGAACTCATTATATGATAAATGATAGAGCGGAAGGAAAATTACACAAGAGAAGATACAATTTAGATATTT 14 11497150 0.987619007 9 9 71 0.8 0.602059991 0.066666667 0.071428571 0.133333333 14 1 2 12 3L:11497131-11497235 6 chrb FBtr0076093|FBtr0344910 11495094|11495094 11499055|11499055 TGATAA 6mer3-8 dme-miR-184-5p 3L + 11497135 11497196 3'utr chrb FlyBase G22397.1 AATCCCACAAAGATCTCGACTAATAAGATGAAGAACTCATTATATGATAAATGATAGAGCGG 5 11497174 0.98591134 3 4 28 0.857142857 0.77815125 0.142857143 0.4 0.571428571 5 1 0 6 3L:11497135-11497196 6 3.5 2312 FBgn0036165 903.39 19.18 29.98 0.003874296 0.182481752 0.116744496 29 5 17 0.01 dme-miR-1012-3p 7mer-m8 TTGACTA 3L 11518941 11518947 - 3L_11518941_11518947_- 0.631525999 0.631525999 0.631525999 0 CG11714 FBtr0346859 11518795 11521365 3L - 11518901 11518948 5'utr CG11714 FlyBase G36153.1 CTTGACTATGCCTGGACTTTTAAAATAACTATAACGTAGTCATAGCCA 12 11518929 0.982745371 5 12 90 1 1.146128036 0.071428571 0.166666667 0.285714286 12 0 0 14 3L:11518901-11518948 7 CG11714 FBtr0346859 11518795 11521365 TTGACTA 7mer-m8 dme-miR-1012-3p 3L - 11518902 11518947 5'utr CG11714 FlyBase G27326.1 TTGACTATGCCTGGACTTTTAAAATAACTATAACGTAGTCATAGCC 8 11518936 0.978050052 3 8 59 1 1.176091259 0 0.625 0.8 8 0 0 15 3L:11518902-11518947 7 7.5 2313 FBgn0036170 2 0.153333333 0.23 3.75 48.91304348 32.60869565 -18 -11 -14.5 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA 3L 11524063 11524068 - 3L_11524063_11524068_- 1 1 1 0 Mob2 FBtr0089333|FBtr0089332 11522755|11522755 11524480|11524480 3L - 11524054 11524091 3'utr Mob2 FlyBase G36155.1 AAAATGTCCTGACTGAAGCCAGAGTGCAAATGCAAAGT 9 11524081 0.611645509 4 9 24 1 0.954242509 0 0 0 9 0 0 9 3L:11524054-11524091 6 Mob2 FBtr0089332|FBtr0089333 11522755|11522755 11524480|11524480 GTGCAA 6mer3-8 dme-miR-92b-3p 3L - 11524047 11524098 3'utr Mob2 FlyBase G27327.1 AACAAATAAAATGTCCTGACTGAAGCCAGAGTGCAAATGCAAAGTCAACGCC 5 11524083 0.961300273 3 4 20 0.857142857 0.77815125 0.142857143 0.2 0.428571429 5 1 0 6 3L:11524047-11524098 6 5.5 2314 FBgn0259481 1602.25 67.59666667 103.25 0.003432673 0.081364959 0.053268765 13 15 14 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA 3L 11563438 11563443 + 3L_11563438_11563443_+ 1 1 1 0 CG7394 FBtr0333215|FBtr0305648 11563415|11563415 11564312|11564312 3L + 11563367 11563497 stop_codon CG7394 FlyBase G29597.1 TGGCGGCCAAGATCAACGAGGCCAAAGACTTTCTGGACAAAGCGAAGTAGTCATCCTCTCCCCGCCGTTCAGTGCAAATAAAGTAGTAGTTCGTGATTAGCATGTAAGCTGAAAGTCTTATGCGTTTTATT 88 11563435 0.874303925 14 85 526 0.96969697 1.681241237 0.232323232 0.113636364 0.212121212 88 2 1 96 3L:11563367-11563497 6 CG7394 FBtr0305648|FBtr0333215|FBtr0290024 11563415|11563415|11563415 11564312|11564312|11563828 GTGCAA 6mer3-8 dme-miR-92b-3p 3L + 11563381 11563478 stop_codon CG7394 FlyBase G22400.1 AACGAGGCCAAAGACTTTCTGGACAAAGCGAAGTAGTCATCCTCTCCCCGCCGTTCAGTGCAAATAAAGTAGTAGTTCGTGATTAGCATGTAAGCTGA 48 11563435 0.972904833 12 42 261 0.876923077 1.755874856 0.230769231 0.3125 0.492307692 48 8 0 57 3L:11563381-11563478 6 31 2315 FBgn0036173 327.5733333 73.10333333 113.5633333 0.094635298 0.424057271 0.272975432 3 3 3 0.01 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3L 11605486 11605491 - 3L_11605486_11605491_- 1 1 1 0 CG6091 FBtr0273305|FBtr0273306 11605434|11605434 11606103|11606103 3L - 11605468 11605511 3'utr CG6091 FlyBase G36169.1 ATTTAATTGACTACAATAAATGGTGCATATTAATCGTAATTTAT 107 11605491 0.863624801 9 105 918 0.974789916 2.064457989 0.092436975 0.093457944 0.18487395 107 3 0 116 3L:11605468-11605511 6 CG6091 FBtr0273306|FBtr0273305 11605434|11605434 11606103|11606103 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3L - 11605468 11605511 3'utr CG6091 FlyBase G27342.1 ATTTAATTGACTACAATAAATGGTGCATATTAATCGTAATTTAT 67 11605491 0.866199681 6 67 570 1 1.944482672 0.090909091 0.23880597 0.420454545 67 0 0 88 3L:11605468-11605511 6 86 2316 FBgn0036180 776.52 29.66333333 45.66333333 0.110750528 2.899202158 1.88334915 0 0 0 0.01 dme-miR-1006-3p 6mer2-7 GAATTT 3L 11605703 11605708 - 3L_11605703_11605708_- 1 1 1 0 CG6091 FBtr0273305|FBtr0273306 11605434|11605434 11606103|11606103 3L - 11605675 11605721 3'utr CG6091 FlyBase G36171.1 TTTTACCATGAATGAATTTTCCCTCCACACCACGTTCCTTTTCCGAT 335 11605703 0.654217136 4 332 1999 0.993181818 2.163360182 0.454545455 0.241791045 0.422727273 335 1 2 437 3L:11605675-11605721 6 CG6091 FBtr0273306|FBtr0273305 11605434|11605434 11606103|11606103 GAATTT 6mer2-7 dme-miR-1006-3p 3L - 11605642 11605736 3'utr CG6091 FlyBase G27344.1 CAGCGTGTTATTTTTTTTTACCATGAATGAATTTTCCCTCCACACCACGTTCCTTTTCCGATAAAATAATGCCTATTTCGTAATTCGTCATAATG 243 11605703 0.970507416 9 241 1391 0.990936556 2.515873844 0.447129909 0.283950617 0.474320242 243 3 0 328 3L:11605642-11605736 6 284.5 2317 FBgn0036180 776.52 29.66333333 45.66333333 0.3663782 9.590965277 6.23038178 -5 -5 -5 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 3L 11629763 11629768 + 3L_11629763_11629768_+ 1 1 1 0 CG18815 FBtr0076103|FBtr0076105|FBtr0076104 11629606|11629606|11629606 11629992|11629992|11629992 3L + 11629745 11629776 3'utr CG18815 FlyBase G29615.1 ATTATGGAAATTATCACTGAAAAATCAATTCG 6 11629756 0.610569028 5 6 33 1 0.77815125 0.166666667 0 0 6 0 0 6 3L:11629745-11629776 6 CG18815 FBtr0076104|FBtr0076105|FBtr0076103 11629606|11629606|11629606 11629992|11629992|11629992 GAAAAA 6mer3-8 dme-miR-980-5p 3L + 11629738 11629783 3'utr CG18815 FlyBase G22410.1 TAGCCCAATTATGGAAATTATCACTGAAAAATCAATTCGAAAAGCA 5 11629748 0.793970976 3 5 34 1 0.903089987 0 0.4 0.625 5 0 0 8 3L:11629738-11629783 6 5 2318 FBgn0042138 741.6666667 76.60333333 116.84 0.006741573 0.065271311 0.042793564 7 15 11 0.01 dme-miR-1008-3p 7mer-A1 GCTGTGA 3L 11642548 11642554 + 3L_11642548_11642554_+ 0.822599051 0.806570585 0.814584818 0.011333861 CG32091 FBtr0076106 11642492 11642902 3L + 11642497 11642597 3'utr CG32091 FlyBase G29620.1 TGAAACCAATATTCCAGATGAATCTTATCCCTAGCTTTAGGCAATGTCAATGCTGTGATGTTCGATTTTAAACAGACAGATAGATACTTCCTGTACATACT 56 11642547 0.985532041 11 55 457 0.986111111 1.851258349 0.111111111 0.196428571 0.375 56 1 0 71 3L:11642497-11642597 7 CG32091 FBtr0076106 11642492 11642902 GCTGTGA 7mer-A1 dme-miR-1008-3p 3L + 11642523 11642574 3'utr CG32091 FlyBase G22414.1 ATCCCTAGCTTTAGGCAATGTCAATGCTGTGATGTTCGATTTTAAACAGACA 37 11642547 0.828858196 4 34 295 0.929824561 1.72427587 0.140350877 0.416666667 0.631578947 36 4 0 53 3L:11642523-11642574 7 42 2319 FBgn0052091 18 0.773333333 1.216666667 2.333333333 54.31034483 34.52054795 1 1 1 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 3L 11683771 11683777 + 3L_11683771_11683777_+ 0.782911824 0.782911824 0.782911824 0 TfIIEalpha FBtr0076108 11683668 11683805 3L + 11683710 11683791 3'utr TfIIEalpha FlyBase G29637.1 GTTTCCCATCTCACGCATAGAGTCATTGTAATTTAAGTTACCCACTAGTTCGAGCGAATGTGTACAAATGAAATGCGTATAA 25 11683768 0.841836871 8 24 152 1 1.491361694 0.129032258 0.24 0.387096774 25 0 0 31 3L:11683710-11683791 7 TfIIEalpha FBtr0076108 11683668 11683805 GTACAAA 7mer-A1 dme-miR-305-5p 3L + 11683707 11683792 3'utr TfIIEalpha FlyBase G22426.1 CGAGTTTCCCATCTCACGCATAGAGTCATTGTAATTTAAGTTACCCACTAGTTCGAGCGAATGTGTACAAATGAAATGCGTATAAA 23 11683769 0.962600594 8 21 113 0.933333333 1.447158031 0.1 0.260869565 0.433333333 23 2 0 28 3L:11683707-11683792 7 17.5 2320 FBgn0015828 547.3633333 41.38 63.43333333 0.031971451 0.422909618 0.275880189 3 2 2.5 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 11688588 11688595 + 3L_11688588_11688595_+ 0.500120318 0.500120318 0.500120318 0 Sug FBtr0273362 11688459 11688825 3L + 11688565 11688617 3'utr Sug FlyBase G29641.1 ATGCAGTGGATACGCTGGCCATTGTACTTAAACCACCATATATTTTGTAAGAT 116 11688587 0.77378824 3 110 727 0.969924812 1.809559715 0.015037594 0.129310345 0.240601504 116 3 1 129 3L:11688565-11688617 8 Sug FBtr0273362 11688459 11688825 GTACTTAA 8mer-A1 dme-miR-252-5p 3L + 11688565 11688606 3'utr Sug FlyBase G22429.1 ATGCAGTGGATACGCTGGCCATTGTACTTAAACCACCATATA 71 11688587 0.759257945 2 71 424 1 2.017033339 0 0.352112676 0.557692308 71 0 0 104 3L:11688565-11688606 8 92.5 2321 FBgn0036191 390.82 14.43333333 22.11666667 0.236681848 6.408775982 4.18236624 1 1 1 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 3L 11689339 11689344 + 3L_11689339_11689344_+ 1 1 1 0 Sug FBtr0344966|FBtr0300100 11689180|11689180 11690155|11690155 3L + 11689309 11689393 3'utr Sug FlyBase G29642.1 ACTCCCGAGCTGCATGTTGAATCGATGTACTACCTGTATTGTAATCTCGCTTTAATTAAGTAGTAACTTATCTCAGTAGCCCCAC 106 11689334 0.824744584 11 103 786 0.977941176 2.123851641 0.176470588 0.235849057 0.404411765 106 3 0 133 3L:11689309-11689393 6 Sug FBtr0344966|FBtr0300100 11689180|11689180 11690155|11690155 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 3L + 11689309 11689392 3'utr Sug FlyBase G22430.1 ACTCCCGAGCTGCATGTTGAATCGATGTACTACCTGTATTGTAATCTCGCTTTAATTAAGTAGTAACTTATCTCAGTAGCCCCA 75 11689334 0.982069065 7 75 554 1 2.086359831 0.180327869 0.426666667 0.647540984 75 0 0 122 3L:11689309-11689392 6 86 2322 FBgn0036191 390.82 14.43333333 22.11666667 0.220050151 5.958429561 3.888470234 5 5 5 0.01 dme-miR-1006-3p 6mer2-7 GAATTT 3L 11689496 11689501 + 3L_11689496_11689501_+ 1 1 1 0 Sug FBtr0344966|FBtr0300100 11689180|11689180 11690155|11690155 3L + 11689472 11689519 3'utr Sug FlyBase G29643.1 AATGTGAGAACTTAATTATTTGTAGAATTTCAAGCGCAGCTGGTTGTT 26 11689499 0.869460364 7 23 154 0.875 1.447158031 0.46875 0.192307692 0.34375 26 4 0 28 3L:11689472-11689519 6 Sug FBtr0344966|FBtr0300100 11689180|11689180 11690155|11690155 GAATTT 6mer2-7 dme-miR-1006-3p 3L + 11689482 11689522 3'utr Sug FlyBase G22431.1 CTTAATTATTTGTAGAATTTCAAGCGCAGCTGGTTGTTTGC 19 11689500 0.758971064 3 15 127 0.821428571 1.361727836 0.428571429 0.263157895 0.5 19 5 0 23 3L:11689482-11689522 6 21 2323 FBgn0036191 390.82 14.43333333 22.11666667 0.053733176 1.454965358 0.949510173 -3 -4 -3.5 0.01 dme-miR-308-3p 8mer-m1 CTGTGATT 3L 11689588 11689595 + 3L_11689588_11689595_+ 0.385559699 0.385360925 0.385460312 0.000140573 Sug FBtr0344966|FBtr0300100 11689180|11689180 11690155|11690155 3L + 11689562 11689617 3'utr Sug FlyBase G29644.1 AGTTTAAATAAGCCGCTGCCTTGGCGCTGTGATTGTTCAACTATTGTTTCTCCACA 92 11689595 0.82371723 10 92 722 1 2.033423755 0.157407407 0.141304348 0.268518519 92 0 0 108 3L:11689562-11689617 8 Sug FBtr0344966|FBtr0300100 11689180|11689180 11690155|11690155 CTGTGATT 8mer-m1 dme-miR-308-3p 3L + 11689565 11689607 3'utr Sug FlyBase G22432.1 TTAAATAAGCCGCTGCCTTGGCGCTGTGATTGTTCAACTATTG 61 11689595 0.691771813 7 59 470 0.961904762 1.703291378 0.152380952 0.475409836 0.695238095 61 3 1 101 3L:11689565-11689607 8 75.5 2324 FBgn0036191 390.82 14.43333333 22.11666667 0.193183563 5.230946882 3.413715147 -7 -7 -7 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 11689729 11689734 + 3L_11689729_11689734_+ 1 1 1 0 Sug FBtr0344966|FBtr0344966|FBtr0344966|FBtr0300100|FBtr0300100|FBtr0300100 11689180|11689180|11689180|11689180|11689180|11689180 11690155|11690155|11690155|11690155|11690155|11690155 3L + 11689720 11689755 3'utr Sug FlyBase G29646.1 TTTTTTTTTCTGTGAAATCTCTTAAGTGCTTACTTA 6 11689728 0.60911767 4 6 69 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3L:11689720-11689755 6 Sug FBtr0344966|FBtr0344966|FBtr0344966|FBtr0300100|FBtr0300100|FBtr0300100 11689180|11689180|11689180|11689180|11689180|11689180 11690155|11690155|11690155|11690155|11690155|11690155 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 11689722 11689749 3'utr Sug FlyBase G22433.1 TTTTTTTCTGTGAAATCTCTTAAGTGCT 5 11689742 0.645295107 3 5 43 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 3L:11689722-11689749 6 5 2325 FBgn0036191 390.82 14.43333333 22.11666667 0.012793613 0.346420323 0.226073851 1 -13 -6 0.01 dme-miR-11-3p 7mer-m1 TGTGATG 3L 11699900 11699906 - 3L_11699900_11699906_- 0.535593563 0.535593563 0.535593563 0 CG11658 FBtr0076126 11699494 11700696 3L - 11699890 11699924 3'utr CG11658 FlyBase G36216.1 GTAGCGTGGGGAAAATCATGTGATGTTGCAGGAAG 7 11699899 0.708582735 3 7 41 1 0.903089987 0.625 0.142857143 0.25 7 0 0 8 3L:11699890-11699924 7 CG11658 FBtr0076126 11699494 11700696 TGTGATG 7mer-m1 dme-miR-11-3p 3L - 11699881 11699924 3'utr CG11658 FlyBase G27373.1 GTAGCGTGGGGAAAATCATGTGATGTTGCAGGAAGCAAAGCTAG 6 11699899 0.957941575 3 6 31 1 0.77815125 1 0 0 6 0 0 6 3L:11699881-11699924 7 6.5 2326 FBgn0036196 52.87 2.63 4.06 0.122943068 2.47148289 1.600985222 -7 -7 -7 0.01 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 3L 11700022 11700029 - 3L_11700022_11700029_- 0.625364009 0.625364009 0.625364009 0 CG11658 FBtr0076126 11699494 11700696 3L - 11700003 11700050 3'utr CG11658 FlyBase G36217.1 TTAACGTTTATCAGCTGCTTTTGGTGCTAAATCGTATTATAAGTTACA 128 11700030 0.753466129 5 124 1365 0.972413793 2.149219113 0.137931034 0.125 0.227586207 128 4 0 141 3L:11700003-11700050 8 CG11658 FBtr0076126 11699494 11700696 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 3L - 11700004 11700050 3'utr CG11658 FlyBase G27374.1 TTAACGTTTATCAGCTGCTTTTGGTGCTAAATCGTATTATAAGTTAC 74 11700030 0.735024211 8 71 748 0.972972973 2.033423755 0.126126126 0.364864865 0.576576577 74 3 0 108 3L:11700004-11700050 8 100.5 2327 FBgn0036196 52.87 2.63 4.06 1.900888973 38.21292776 24.75369458 1 1 1 0.01 dme-miR-8-3p 6mer2-7 AGTATT 3L 11700648 11700653 - 3L_11700648_11700653_- 1 1 1 0 CG11658 FBtr0076127|FBtr0076126|FBtr0076124|FBtr0076128|FBtr0076125 11700089|11699494|11700089|11700089|11700089 11700696|11700696|11700696|11700696|11700696 3L - 11700607 11700690 3'utr CG11658 FlyBase G36220.1 TGTTCGGACCAAGGGAGAGAGATAGAGATAGATCGAAAGTATTTTTACGGCCCAGTGGATAGGTTGTTTATGCGTGTGTTAAAG 42 11700667 0.947913067 8 38 162 0.914893617 1.33243846 0.170212766 0.119047619 0.212765957 42 3 1 43 3L:11700607-11700690 6 CG11658 FBtr0076127|FBtr0076125|FBtr0076128|FBtr0076124|FBtr0076126 11700089|11700089|11700089|11700089|11699494 11700696|11700696|11700696|11700696|11700696 AGTATT 6mer2-7 dme-miR-8-3p 3L - 11700604 11700687 3'utr CG11658 FlyBase G27376.1 TCGGACCAAGGGAGAGAGATAGAGATAGATCGAAAGTATTTTTACGGCCCAGTGGATAGGTTGTTTATGCGTGTGTTAAAGTTT 18 11700668 0.971775366 6 15 91 0.851851852 0.884606581 0.222222222 0.388888889 0.592592593 18 2 2 23 3L:11700604-11700687 6 13.5 2328 FBgn0036196 52.87 2.63 4.06 0.255343295 5.133079848 3.325123153 14 15 14.5 0.01 dme-miR-190-5p 6mer2-7 CATATC 3L 11709930 11709935 + 3L_11709930_11709935_+ 0.999998613 0.933049239 0.966523926 0.047340375 Ccdc56 FBtr0302271 11709346 11710570 3L + 11709896 11709966 3'utr Ccdc56 FlyBase G29653.2 AGCGGATCCATCTGATTGGCAACCTGCCGTTCGCCATATCCACTCGACTGTTGATCAATTGGCTTGATGAT 27 11709946 0.976798817 8 25 165 0.945945946 1.544068044 0.351351351 0.259259259 0.459459459 27 2 0 35 3L:11709896-11709966 6 Ccdc56 FBtr0302271 11709346 11710570 CATATC 6mer2-7 dme-miR-190-5p 3L + 11709918 11709965 3'utr Ccdc56 FlyBase G22435.1 CCTGCCGTTCGCCATATCCACTCGACTGTTGATCAATTGGCTTGATGA 13 11709947 0.733069868 5 12 98 0.888888889 1.204119983 0.111111111 0.384615385 0.555555556 13 2 0 16 3L:11709918-11709965 6 16 2329 FBgn0261353 446.3333333 35.80333333 54.86333333 0.035847647 0.446885765 0.291633757 -16 -17 -16.5 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3L 11710554 11710559 + 3L_11710554_11710559_+ 1 1 1 0 Ccdc56 FBtr0302271 11709346 11710570 3L + 11710517 11710565 3'utr Ccdc56 FlyBase G29657.2 AATATGGTAAAATGTATTTAATTAGTTGAGTAAACACAAGACTCTAAAA 25 11710529 0.951517488 6 23 196 0.928571429 1.414973348 0.25 0.12 0.214285714 25 2 0 26 3L:11710517-11710565 6 Ccdc56 FBtr0302271 11709346 11710570 AAGACT 6mer3-8 dme-miR-14-3p 3L + 11710521 11710567 3'utr Ccdc56 FlyBase G22437.1 TGGTAAAATGTATTTAATTAGTTGAGTAAACACAAGACTCTAAAAGC 15 11710561 0.771619591 6 12 79 0.894736842 1.230448921 0.263157895 0.2 0.368421053 15 2 0 17 3L:11710521-11710567 6 9.5 2330 FBgn0261353 446.3333333 35.80333333 54.86333333 0.021284541 0.265338423 0.173157543 25 -7 9 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3L 11786160 11786166 - 3L_11786160_11786166_- 0.521223855 0.521223855 0.521223855 0 Pi3K68D FBtr0076086|FBtr0332055 11786050|11786050 11786625|11786625 3L - 11786146 11786192 5'utr Pi3K68D FlyBase G36244.1 AACCATGTATTACGAAATGAACAAATTGTGATTTGCTGCTACATATA 60 11786166 0.982590998 4 59 452 0.987341772 1.591064607 0.215189873 0.216666667 0.405063291 60 0 1 78 3L:11786146-11786192 7 Pi3K68D FBtr0332055|FBtr0076086 11786050|11786050 11786625|11786625 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 11786151 11786181 5'utr Pi3K68D FlyBase G27394.1 ACGAAATGAACAAATTGTGATTTGCTGCTAC 35 11786160 0.573528481 5 35 263 1 1.785329835 0.245901639 0.457142857 0.68852459 35 0 0 61 3L:11786151-11786181 7 47.5 2331 FBgn0015278 1326.206667 35.56 54.69 0.035816439 1.335770529 0.868531724 0 -6 -3 0.01 dme-miR-995-5p 6mer3-8 AATTCG 3L 11786391 11786396 - 3L_11786391_11786396_- 1 1 1 0 Pi3K68D FBtr0076086|FBtr0332055 11786050|11786050 11786625|11786625 3L - 11786368 11786413 5'utr Pi3K68D FlyBase G36245.1 ATGTGCCCTCATATCGAAATTCGTGCCTTCCGCTATTGCCGGAATA 11 11786386 0.975210035 4 10 79 0.923076923 1.079181246 0 0.181818182 0.307692308 11 1 0 12 3L:11786368-11786413 6 Pi3K68D FBtr0332055|FBtr0076086 11786050|11786050 11786625|11786625 AATTCG 6mer3-8 dme-miR-995-5p 3L - 11786367 11786414 5'utr Pi3K68D FlyBase G27395.1 TATGTGCCCTCATATCGAAATTCGTGCCTTCCGCTATTGCCGGAATAA 5 11786386 0.975444574 2 5 38 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 3L:11786367-11786414 6 8 2332 FBgn0015278 1326.206667 35.56 54.69 0.006032242 0.224971879 0.146279027 -10 -10 -10 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3L 11817023 11817029 - 3L_11817023_11817029_- 0.443131018 0.443131018 0.443131018 0 CG5946 FBtr0302136|FBtr0076078|FBtr0076079|FBtr0301135 11816981|11816693|11816981|11816981 11817143|11817143|11817143|11818073 3L - 11817008 11817046 3'utr CG5946 FlyBase G36255.1 CGCCAAGATTTCGGCAATGTGATTGAAAACCAAGCGAAT 33 11817023 0.855001821 5 33 173 1 1.653212514 0.088888889 0.303030303 0.488888889 33 0 0 45 3L:11817008-11817046 7 CG5946 FBtr0302136|FBtr0301135|FBtr0076078|FBtr0076079 11816981|11816981|11816693|11816981 11817143|11818073|11817143|11817143 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 11817007 11817042 3'utr CG5946 FlyBase G27398.1 AAGATTTCGGCAATGTGATTGAAAACCAAGCGAATA 15 11817023 0.955892702 2 15 70 1 1.342422681 0.136363636 0.466666667 0.636363636 15 0 0 22 3L:11817007-11817042 7 24 2333 FBgn0036211 623.3566667 60.22666667 92.04666667 0.038501233 0.398494576 0.260737307 -6 -6 -6 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 3L 11817112 11817118 - 3L_11817112_11817118_- 0.620204266 0.620204266 0.620204266 0 CG5946 FBtr0302136|FBtr0076078|FBtr0076079|FBtr0301135 11816981|11816693|11816981|11816981 11817143|11817143|11817143|11818073 3L - 11817099 11817141 3'utr CG5946 FlyBase G36256.1 TGATGGACATTATGGGACGAAATTGCATTTTCGTTGTGTTATA 9 11817119 0.893800346 2 9 84 1 0.954242509 0.333333333 0 0 9 0 0 9 3L:11817099-11817141 7 CG5946 FBtr0302136|FBtr0301135|FBtr0076078|FBtr0076079 11816981|11816981|11816693|11816981 11817143|11818073|11817143|11817143 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 11817082 11817131 3'utr CG5946 FlyBase G27399.1 TATGGGACGAAATTGCATTTTCGTTGTGTTATATTCCTCTTTTTTTATCT 6 11817119 0.991119524 2 5 61 0.7 0.84509804 0 0.5 0.7 6 3 0 7 3L:11817082-11817131 7 7 2334 FBgn0036211 623.3566667 60.22666667 92.04666667 0.011229526 0.116227585 0.076048381 1 1 1 0.01 dme-miR-282-5p 6mer2-7 GAGGCT 3L 11823758 11823763 + 3L_11823758_11823763_+ 1 1 1 0 RpL10Ab FBtr0345073 11823367 11824211 3L + 11823660 11823778 3'utr RpL10Ab FlyBase G29681.1 TGAAGCACATTCCTCGTCCCAAGATGAAGGTGTGCATCCTTGGCGATCAGCAGCATTGCGACGAAGCCAAGGCCAACAACGTCGACTTCATGGATGCCGAGGCTCTGAAGAAGCTGAAC 11 11823765 0.920148591 8 11 43 1 1.176091259 0.4 0.272727273 0.466666667 11 0 0 15 3L:11823660-11823778 6 RpL10Ab FBtr0345073 11823367 11824211 GAGGCT 6mer2-7 dme-miR-282-5p 3L + 11823736 11823820 3'utr RpL10Ab FlyBase G22458.1 CAACGTCGACTTCATGGATGCCGAGGCTCTGAAGAAGCTGAACAAGAACAAGAAGCTGGTGAAGAAGCTGGCCAAGTCCTATGAT 14 11823753 0.948949484 10 13 54 0.958333333 1.06069784 0.458333333 0.428571429 0.666666667 14 0 1 23 3L:11823736-11823820 6 6.5 2335 FBgn0036213 2531.526667 421.71 637.3866667 0.002567621 0.015413436 0.010197891 -7 5 -1 0.01 dme-miR-276a-3p 6mer3-8 AGTTCC 3L 11823894 11823899 + 3L_11823894_11823899_+ 1 1 1 0 RpL10Ab FBtr0345073 11823367 11824211 3L + 11823859 11824035 3'utr RpL10Ab FlyBase G29682.2 TCGTTTGCTTGGCCCTGGCTTGAACAAGGCCGGCAAGTTCCCTGCCCTGCTGTCGCATCAGGAGTCTATGATTGGCAAGATCGAGGAGGTTAAGTCGACCATCAAGTTCCAGATGAAGAAGGTGCTCTGCCTGTCCGTCGCCGTCGGCCACGTTGGCATGAAGTCCGACGAGCTGGC 36 11823896 0.965619748 17 35 166 0.977272727 1.633468456 0.363636364 0.166666667 0.318181818 36 1 0 43 3L:11823859-11824035 6 RpL10Ab FBtr0345073 11823367 11824211 AGTTCC 6mer3-8 dme-miR-276a-3p 3L + 11823827 11823937 3'utr RpL10Ab FlyBase G22459.1 CTGGCCTCTGAGTCGCTGATCAAGCAGATTCCTCGTTTGCTTGGCCCTGGCTTGAACAAGGCCGGCAAGTTCCCTGCCCTGCTGTCGCATCAGGAGTCTATGATTGGCAAG 18 11823896 0.9707545 10 17 97 0.96 1.380211242 0.44 0.388888889 0.56 18 1 0 24 3L:11823827-11823937 6 9.5 2336 FBgn0036213 2531.526667 421.71 637.3866667 0.003752676 0.022527329 0.01490461 -2 -2 -2 0.01 dme-miR-965-3p 8mer-A1 TACGCTTA 3L 11826959 11826966 - 3L_11826959_11826966_- 0.595908228 0.616537192 0.60622271 0.014586906 CycA FBtr0304650 11826717 11827651 3L - 11826842 11827051 3'utr CycA FlyBase G36271.1 TAAAAAACTCACACTGATCGTGCTCAGAACGGCAGGCAGCCGTGGAATGTTGCTAAACTCTTGTTCTTGTAATCTTGTAATCTTATACGCTTACTAAATGTTTACTAAACTTAGTCTAGACCATCTTGCGACCACATATGTAGCTAGAATAGAGCGCTGCCGAAATGCGTACAGCCAGATGATGGGTCTTACTTTACACTTAGGTTTATG 90 11826967 0.953024251 28 82 708 0.91509434 1.384711743 0.150943396 0.166666667 0.29245283 90 6 3 97 3L:11826842-11827051 8 CycA FBtr0304650 11826717 11827651 TACGCTTA 8mer-A1 dme-miR-965-3p 3L - 11826893 11827009 3'utr CycA FlyBase G27411.1 TGGAATGTTGCTAAACTCTTGTTCTTGTAATCTTGTAATCTTATACGCTTACTAAATGTTTACTAAACTTAGTCTAGACCATCTTGCGACCACATATGTAGCTAGAATAGAGCGCTG 55 11826967 0.849991589 14 47 549 0.845238095 1.374137094 0.154761905 0.436363636 0.630952381 55 11 2 71 3L:11826893-11827009 8 43 2337 FBgn0000404 2869.163333 125.9133333 194.37 0.014986947 0.341504739 0.221227556 1 1 1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 11827114 11827119 - 3L_11827114_11827119_- 1 1 1 0 CycA FBtr0076075|FBtr0076075|FBtr0076075|FBtr0304650|FBtr0304650|FBtr0304650 11827081|11827081|11827081|11826717|11826717|11826717 11827651|11827651|11827651|11827651|11827651|11827651 3L - 11827097 11827140 3'utr CycA FlyBase G36272.1 ACTATTTACTCCGTAAATGTTCTGTGAACTCCAAAACAAATATA 26 11827120 0.973508664 6 24 185 0.944444444 1.230448921 0 0.230769231 0.444444444 26 1 1 34 3L:11827097-11827140 6 CycA FBtr0076075|FBtr0076075|FBtr0076075|FBtr0304650|FBtr0304650|FBtr0304650 11827081|11827081|11827081|11826717|11826717|11826717 11827651|11827651|11827651|11827651|11827651|11827651 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 11827099 11827140 3'utr CycA FlyBase G27413.1 ACTATTTACTCCGTAAATGTTCTGTGAACTCCAAAACAAATA 27 11827120 0.804497104 7 26 192 0.951219512 1.591064607 0.048780488 0.37037037 0.585365854 27 2 0 39 3L:11827099-11827140 6 25.5 2338 FBgn0000404 2869.163333 125.9133333 194.37 0.008887608 0.202520252 0.131193085 1 1 1 0.01 dme-miR-79-3p 7mer-A1 AGCTTTA 3L 11993631 11993637 - 3L_11993631_11993637_- 0.823349562 0.823349562 0.823349562 0 Grip163 FBtr0076061 11993272 11993752 3L - 11993623 11993685 3'utr Grip163 FlyBase G36299.1 TATGCATGCATGGCGTCTCCTAAATGTAAAGCTTCGGTGAAGAAAATCAGCTTTAAAGGCATT 19 11993639 0.951815006 5 18 106 0.954545455 1.021189299 0.045454545 0.105263158 0.227272727 19 0 1 21 3L:11993623-11993685 7 Grip163 FBtr0076061 11993272 11993752 AGCTTTA 7mer-A1 dme-miR-79-3p 3L - 11993616 11993685 3'utr Grip163 FlyBase G27430.1 TATGCATGCATGGCGTCTCCTAAATGTAAAGCTTCGGTGAAGAAAATCAGCTTTAAAGGCATTTATTTCT 16 11993639 0.967071286 4 15 86 0.947368421 1.255272505 0.210526316 0.125 0.263157895 16 1 0 18 3L:11993616-11993685 7 13 2339 FBgn0026432 421 10.95666667 16.75333333 0.03087886 1.186492242 0.775964982 2 2 2 0.01 dme-miR-263a-5p 7mer-m1 TGCCATT 3L 11993717 11993723 - 3L_11993717_11993723_- 0.765586663 0.765586663 0.765586663 0 Grip163 FBtr0076061 11993272 11993752 3L - 11993699 11993875 stop_codon Grip163 FlyBase G36300.1 AAGGCGGCCGCTTCTGGTTACCAGGAGGAAATCGGTGACCTGATTTGTATTATTAACTTTAACCACTATTACAAGGTATCTGGGAACCATACTGGTTCCTCAATGGAGGACAAAAAGTGCTAGCCAATAATTGTTAGATAGGGAATTTATCTTGCCATTAAGCTGAGCTTAGAACAT 70 11993718 0.949236192 14 68 606 0.976190476 1.913813852 0.154761905 0.171428571 0.30952381 70 2 0 82 3L:11993699-11993875 7 Grip163 FBtr0076061 11993272 11993752 TGCCATT 7mer-m1 dme-miR-263a-5p 3L - 11993701 11993853 stop_codon Grip163 FlyBase G27431.1 AGGAGGAAATCGGTGACCTGATTTGTATTATTAACTTTAACCACTATTACAAGGTATCTGGGAACCATACTGGTTCCTCAATGGAGGACAAAAAGTGCTAGCCAATAATTGTTAGATAGGGAATTTATCTTGCCATTAAGCTGAGCTTAGAAC 43 11993718 0.895317004 12 42 352 0.958333333 1.236789099 0.097222222 0.441860465 0.666666667 43 0 3 69 3L:11993701-11993853 7 22 2340 FBgn0026432 421 10.95666667 16.75333333 0.052256532 2.007909948 1.313171508 -5 -5 -5 0.01 dme-miR-305-5p 6mer2-7 GTACAA 3L 12121859 12121864 - 3L_12121859_12121864_- 1 1 1 0 yps FBtr0305992|FBtr0076027 12121272|12121678 12122663|12122106 3L - 12121827 12121890 3'utr yps FlyBase G36314.1 TAGTTTCGTAGGGCAGAGAATCAATTGTACAACTCATACCACAACAAAACTAACATCCTCAAAA 31 12121866 0.964967945 3 31 162 1 1.556302501 0.361111111 0.161290323 0.277777778 31 0 0 36 3L:12121827-12121890 6 yps FBtr0305992|FBtr0076027 12121272|12121678 12122663|12122106 GTACAA 6mer2-7 dme-miR-305-5p 3L - 12121846 12121884 3'utr yps FlyBase G27441.1 CGTAGGGCAGAGAATCAATTGTACAACTCATACCACAAC 11 12121866 0.867847302 2 9 45 0.941176471 1.204119983 0.411764706 0.363636364 0.588235294 11 1 0 16 3L:12121846-12121884 6 19.5 2341 FBgn0022959 5324.54 265.4 408.5666667 0.003662288 0.073474002 0.047727829 2 2 2 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 3L 12143112 12143119 + 3L_12143112_12143119_+ 0.64356572 0.64356572 0.64356572 0 RhoGAP68F FBtr0334092|FBtr0334091|FBtr0075997|FBtr0334093 12142827|12142827|12142827|12142827 12143380|12143380|12143380|12143380 3L + 12143062 12143135 3'utr RhoGAP68F FlyBase G29720.1 CCGAAAATCACAATTATTTACCCCCAACAAGCGCTTAATACGATTGATTTACCAAAGAAATTTGCTCGTGTTCG 31 12143111 0.974028894 8 30 186 0.974358974 1.278753601 0.128205128 0.225806452 0.384615385 31 0 1 38 3L:12143062-12143135 8 RhoGAP68F FBtr0334093|FBtr0075997|FBtr0334091|FBtr0334092 12142827|12142827|12142827|12142827 12143380|12143380|12143380|12143380 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 12143083 12143131 3'utr RhoGAP68F FlyBase G22497.1 CCCCAACAAGCGCTTAATACGATTGATTTACCAAAGAAATTTGCTCGTG 22 12143111 0.979592546 4 20 133 0.903225806 1.146128036 0.258064516 0.272727273 0.483870968 22 2 1 28 3L:12143083-12143131 8 23.5 2342 FBgn0036257 644.8233333 34.92 53.27666667 0.036444091 0.672966781 0.441093662 1 1 1 0.01 dme-miR-283-5p 6mer3-8 TGATAT 3L 12143161 12143166 + 3L_12143161_12143166_+ 0.999651417 1 0.999825709 0.000246497 RhoGAP68F FBtr0334092|FBtr0334091|FBtr0075997|FBtr0334093 12142827|12142827|12142827|12142827 12143380|12143380|12143380|12143380 3L + 12143137 12143186 3'utr RhoGAP68F FlyBase G29721.1 TATGCGACGAACAGGAGAGAAATTTGATATGAGATGTTATTATTATATAC 13 12143162 0.828116581 6 12 92 0.866666667 1.113943352 0.2 0.153846154 0.266666667 13 2 0 13 3L:12143137-12143186 6 RhoGAP68F FBtr0334093|FBtr0075997|FBtr0334091|FBtr0334092 12142827|12142827|12142827|12142827 12143380|12143380|12143380|12143380 TGATAT 6mer3-8 dme-miR-283-5p 3L + 12143140 12143172 3'utr RhoGAP68F FlyBase G22498.1 GCGACGAACAGGAGAGAAATTTGATATGAGATG 8 12143161 0.934356752 2 7 28 1 1 0.5 0.25 0.4 8 0 0 10 3L:12143140-12143172 6 10 2343 FBgn0036257 644.8233333 34.92 53.27666667 0.015508124 0.286368843 0.187699431 -1 0 -0.5 0.01 dme-miR-1006-3p 6mer2-7 GAATTT 3L 12143308 12143313 + 3L_12143308_12143313_+ 1 1 1 0 RhoGAP68F FBtr0334092|FBtr0334091|FBtr0075997|FBtr0334093 12142827|12142827|12142827|12142827 12143380|12143380|12143380|12143380 3L + 12143266 12143329 3'utr RhoGAP68F FlyBase G29723.1 AGTGGAGTTGTGGCGAACTCAAAAATCGTACTGTGTAGTCTTGAATTTCCTTATAGTCATACAA 14 12143311 0.993605789 7 10 119 0.764705882 1.113943352 0.176470588 0.142857143 0.294117647 14 4 0 13 3L:12143266-12143329 6 RhoGAP68F FBtr0334093|FBtr0075997|FBtr0334091|FBtr0334092 12142827|12142827|12142827|12142827 12143380|12143380|12143380|12143380 GAATTT 6mer2-7 dme-miR-1006-3p 3L + 12143287 12143331 3'utr RhoGAP68F FlyBase G22500.1 AAAATCGTACTGTGTAGTCTTGAATTTCCTTATAGTCATACAAAC 7 12143316 0.652171008 5 6 64 0.888888889 0.903089987 0 0.285714286 0.444444444 7 1 0 8 3L:12143287-12143331 6 8 2344 FBgn0036257 644.8233333 34.92 53.27666667 0.012406499 0.229095074 0.150159545 -3 -8 -5.5 0.01 dme-miR-34-5p 8mer-A1 CACTGCCA 3L 12156412 12156419 + 3L_12156412_12156419_+ 0.678407974 0.678407974 0.678407974 0 Nrx-IV FBtr0075999|FBtr0075998 12156240|12156240 12156990|12156990 3L + 12156394 12156468 3'utr Nrx-IV FlyBase G29736.1 AGAAAATACTTTTCCATGCACTGCCAATTGTTTTGCGCAAGTAAATGCTAAGATTTGATTTATAATTGGTTGGCT 20 12156410 0.985961967 6 20 165 1 1.397940009 0.32 0.25 0.4 20 0 0 25 3L:12156394-12156468 8 Nrx-IV FBtr0075999|FBtr0075998 12156240|12156240 12156990|12156990 CACTGCCA 8mer-A1 dme-miR-34-5p 3L + 12156339 12156426 3'utr Nrx-IV FlyBase G22508.1 GAGAACGAAGTGAAAATCAAATAGACACGGAAAAGGCTCACCACGCATAACAGACAGAAAATACTTTTCCATGCACTGCCAATTGTTT 18 12156410 0.979549987 4 18 123 1 1.447158031 0.357142857 0.333333333 0.571428571 18 0 0 28 3L:12156339-12156426 8 16.5 2345 FBgn0013997 1120.423333 27.23333333 41.64333333 0.014726577 0.605875153 0.396221884 2 2 2 0.01 dme-miR-184-3p 7mer-A1 CCGTCCA 3L 12156548 12156554 + 3L_12156548_12156554_+ 0.823349562 0.823349562 0.823349562 0 Nrx-IV FBtr0075999|FBtr0075998 12156240|12156240 12156990|12156990 3L + 12156491 12156571 3'utr Nrx-IV FlyBase G29737.1 TTTTTAGTCTTTGGTTCTGTCTGACGGCATTATTGAAATTTCTTCTATCACAGAATACCGTCCATTTTTAGTTAATTTTAT 469 12156546 0.960489492 18 449 4593 0.956603774 1.625826713 0.020754717 0.1108742 0.213207547 469 12 11 507 3L:12156491-12156571 7 Nrx-IV FBtr0075999|FBtr0075998 12156240|12156240 12156990|12156990 CCGTCCA 7mer-A1 dme-miR-184-3p 3L + 12156496 12156571 3'utr Nrx-IV FlyBase G22509.1 AGTCTTTGGTTCTGTCTGACGGCATTATTGAAATTTCTTCTATCACAGAATACCGTCCATTTTTAGTTAATTTTAT 187 12156546 0.951413117 15 173 1622 0.91634981 1.302835797 0.02661597 0.320855615 0.517110266 187 11 11 241 3L:12156496-12156571 7 316.5 2346 FBgn0013997 1120.423333 27.23333333 41.64333333 0.282482514 11.62178703 7.600256143 2 2 2 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 3L 12156856 12156861 + 3L_12156856_12156861_+ 1 1 1 0 Nrx-IV FBtr0075999|FBtr0075998 12156240|12156240 12156990|12156990 3L + 12156824 12156884 3'utr Nrx-IV FlyBase G29739.1 ATTGTATTTTTGGAAAATGCATTTTGAACGTCTTGACTTGAAATTTTCAAATATACATTAG 17 12156856 0.832425744 7 17 137 1 1.342422681 0.090909091 0.235294118 0.409090909 17 0 0 22 3L:12156824-12156884 6 Nrx-IV FBtr0075999|FBtr0075998 12156240|12156240 12156990|12156990 TTGACT 6mer3-8 dme-miR-1012-3p 3L + 12156844 12156876 3'utr Nrx-IV FlyBase G22511.1 ATTTTGAACGTCTTGACTTGAAATTTTCAAATA 17 12156856 0.767644613 2 16 129 0.961538462 1.096910013 0 0.352941176 0.576923077 17 0 1 25 3L:12156844-12156876 6 15.5 2347 FBgn0013997 1120.423333 27.23333333 41.64333333 0.013834057 0.569155447 0.372208437 0 0 0 0.01 dme-miR-8-3p 7mer-m8 CAGTATT 3L 12269248 12269254 + 3L_12269248_12269254_+ 0.661615243 0.661615243 0.661615243 0 CG32100 FBtr0076006 12269199 12269803 3L + 12269231 12269286 3'utr CG32100 FlyBase G29741.1 TATATCGTTAGTGCACTCAGTATTTTCTGTTTGTTATGATTAGCTATAGATTCCTT 11 12269247 0.89090119 6 11 138 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 3L:12269231-12269286 7 CG32100 FBtr0076006 12269199 12269803 CAGTATT 7mer-m8 dme-miR-8-3p 3L + 12269231 12269276 3'utr CG32100 FlyBase G22512.1 TATATCGTTAGTGCACTCAGTATTTTCTGTTTGTTATGATTAGCTA 8 12269255 0.991115255 5 8 88 1 1.113943352 0 0.5 0.692307692 8 0 0 13 3L:12269231-12269276 7 8.5 2348 FBgn0052100 96.87 5.46 8.436666667 0.087746464 1.556776557 1.007506914 1 -7 -3 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3L 12270052 12270057 - 3L_12270052_12270057_- 0.999999999 1 1 0 Pbgs FBtr0076011|FBtr0333357 12269966|12269450 12270291|12270291 3L - 12270031 12270082 3'utr Pbgs FlyBase G36359.1 ATTTTACCGATTAAGTGGCTTAAATAAGACTCAAAGGCTTTTACTTACATCA 59 12270042 0.802408982 8 55 364 0.943661972 1.348953548 0.056338028 0.203389831 0.338028169 59 2 2 67 3L:12270031-12270082 6 Pbgs FBtr0076011|FBtr0333357 12269966|12269450 12270291|12270291 AAGACT 6mer3-8 dme-miR-14-3p 3L - 12270029 12270082 3'utr Pbgs FlyBase G27466.1 ATTTTACCGATTAAGTGGCTTAAATAAGACTCAAAGGCTTTTACTTACATCAAT 28 12270042 0.971497265 7 27 162 0.971428571 1.230448921 0.171428571 0.142857143 0.314285714 28 0 1 34 3L:12270029-12270082 6 41.5 2349 FBgn0036271 224.0566667 17.76333333 27 0.185221001 2.336273222 1.537037037 -15 -15 -15 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 3L 12272080 12272085 - 3L_12272080_12272085_- 1 1 1 0 CG4300 FBtr0076010|FBtr0076010|FBtr0076009|FBtr0076009|FBtr0346393|FBtr0346393|FBtr0346392|FBtr0346392 12271654|12271654|12271654|12271654|12271654|12271654|12271654|12271654 12272457|12272457|12272457|12272457|12272184|12272184|12272184|12272184 3L - 12271953 12272115 3'utr CG4300 FlyBase G36365.1 CAGAGGAAAACACGCACTTCCAATGGCTGTTACTTACAATTGAAAACCAAACCAAATACTGAACCCAATTCGTTTACGCTTAAGTTAGGCTTTAGTTCCGTTTCTCGTTCACTGATTTCAATGCTAAAAACTAAGACAAAAGTACAACCTTTAAGCAAGGACA 316 12272092 0.981231643 22 311 2244 0.984654731 2.284430734 0.079283887 0.196202532 0.350383632 316 5 1 385 3L:12271953-12272115 6 CG4300 FBtr0346393|FBtr0346393|FBtr0346392|FBtr0346392|FBtr0076010|FBtr0076010|FBtr0076009|FBtr0076009 12271654|12271654|12271654|12271654|12271654|12271654|12271654|12271654 12272184|12272184|12272184|12272184|12272457|12272457|12272457|12272457 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 3L - 12272018 12272118 3'utr CG4300 FlyBase G27472.2 AGACAGAGGAAAACACGCACTTCCAATGGCTGTTACTTACAATTGAAAACCAAACCAAATACTGAACCCAATTCGTTTACGCTTAAGTTAGGCTTTAGTTC 233 12272092 0.982641411 12 223 1643 0.966759003 2.065704172 0.113573407 0.407725322 0.617728532 233 10 2 349 3L:12272018-12272118 6 233.5 2350 FBgn0036272 597.6666667 37.11333333 57.19666667 0.390686001 6.291539429 4.082405735 7 7 7 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3L 12281123 12281129 + 3L_12281123_12281129_+ 0.823349562 0.823349562 0.823349562 0 CG10426 FBtr0076007|FBtr0333356 12281032|12281032 12281476|12281476 3L + 12281086 12281153 3'utr CG10426 FlyBase G29745.1 TGAAATCTATTTAGTCATTTACTCGAATCTCAAAGTGCTAGTCAAAGCTTTCCTACGGTTGTGCGACG 30 12281103 0.896095075 9 24 219 0.777777778 0.970036777 0.305555556 0.2 0.333333333 30 6 2 28 3L:12281086-12281153 7 CG10426 FBtr0333356|FBtr0076007 12281032|12281032 12281476|12281476 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L + 12281085 12281156 3'utr CG10426 FlyBase G22514.1 TTGAAATCTATTTAGTCATTTACTCGAATCTCAAAGTGCTAGTCAAAGCTTTCCTACGGTTGTGCGACGCCT 24 12281121 0.960811269 12 22 166 0.971428571 1.230448921 0.085714286 0.333333333 0.542857143 24 0 1 34 3L:12281085-12281156 7 18 2351 FBgn0036273 103.6666667 4.046666667 6.22 0.173633441 4.448105437 2.893890675 20 2 11 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 12281333 12281338 + 3L_12281333_12281338_+ 1 1 1 0 CG10426 FBtr0076007|FBtr0333356 12281032|12281032 12281476|12281476 3L + 12281222 12281377 3'utr CG10426 FlyBase G29746.1 TACTTACCCTGCAATGCTGCGGTAGATCTTAGGCGCTGCCTTTCGCCTCGAGGCCTTAGTCGTAATACGTTCCTTATGAGATTATCTAATACATACTCGTGCAACAATTCTGTACCTCTACTCTGAAGCACAAGCTTAGTTCGTAGATAAACTAAA 70 12281332 0.865425051 18 69 510 0.977272727 1.934498451 0.113636364 0.214285714 0.375 70 2 0 86 3L:12281222-12281377 6 CG10426 FBtr0333356|FBtr0076007 12281032|12281032 12281476|12281476 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 12281314 12281359 3'utr CG10426 FlyBase G22516.1 ATACTCGTGCAACAATTCTGTACCTCTACTCTGAAGCACAAGCTTA 21 12281332 0.97958391 5 20 141 0.933333333 0.970036777 0 0.333333333 0.533333333 21 0 2 28 3L:12281314-12281359 6 28.5 2352 FBgn0036273 103.6666667 4.046666667 6.22 0.274919614 7.042833608 4.581993569 1 1 1 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 3L 12402673 12402678 - 3L_12402673_12402678_- 0.996942799 0.997392243 0.997167521 0.000317774 CG32103 FBtr0332090 12402293 12404054 3L - 12402656 12402691 3'utr CG32103 FlyBase G36373.1 ACACTTGAATCATTTGACTTGATCATTAAAAATCAC 13 12402678 0.971147033 5 13 102 1 1.255272505 0 0.230769231 0.444444444 13 0 0 18 3L:12402656-12402691 6 CG32103 FBtr0332090 12402293 12404054 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 12402653 12402689 3'utr CG32103 FlyBase G27476.1 ACTTGAATCATTTGACTTGATCATTAAAAATCACCCA 12 12402678 0.978657028 4 11 97 0.947368421 1.255272505 0.052631579 0.5 0.684210526 12 1 0 18 3L:12402653-12402689 6 12.5 2353 FBgn0052103 1942.393333 66.43 101.62 0.00643536 0.188167996 0.123007282 0 0 0 0.01 dme-miR-1006-3p 6mer2-7 GAATTT 3L 12402801 12402806 - 3L_12402801_12402806_- 0.999994577 1 0.999997289 3.82E-06 CG32103 FBtr0332090 12402293 12404054 3L - 12402707 12402803 3'utr CG32103 FlyBase G36374.1 TTTTGTACGACTGTAGTGAAAATAATGACTTTTTAAATATGATTTATCACTGTCCCAAAAAACAAAAAAAAAAAACGCTTTACCACAGCACCGCATT 98 12402777 0.981071741 20 92 660 0.975 1.767155866 0.216666667 0.204081633 0.35 98 2 1 117 3L:12402707-12402803 3 CG32103 FBtr0332090 12402293 12404054 GAATTT 6mer2-7 dme-miR-1006-3p 3L - 12402742 12402826 3'utr CG32103 FlyBase G27478.1 TACTCTTAATTAGCCAAATTGAATTTTGTACGACTGTAGTGAAAATAATGACTTTTTAAATATGATTTATCACTGTCCCAAAAAA 59 12402790 0.62675499 18 57 437 0.969072165 1.973127854 0.164948454 0.457627119 0.670103093 59 3 0 94 3L:12402742-12402826 6 21.5 2354 FBgn0052103 1942.393333 66.43 101.62 0.011068819 0.323648954 0.211572525 -29 -16 -22.5 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 12402929 12402934 - 3L_12402929_12402934_- 1 1 1 0 CG32103 FBtr0332090 12402293 12404054 3L - 12402897 12402978 3'utr CG32103 FlyBase G36375.1 AACCAACACAATACCCATACACCATGTAATTTATTTGATATATCATGTGAATCTGAAGCCGATCGCAAAACCGACCAATCAT 48 12402931 0.999981988 12 42 286 0.883333333 1.122215878 0.166666667 0.208333333 0.366666667 48 4 3 53 3L:12402897-12402978 6 CG32103 FBtr0332090 12402293 12404054 ATGTGA 6mer3-8 dme-miR-1003-3p 3L - 12402911 12402960 3'utr CG32103 FlyBase G27479.1 ACACCATGTAATTTATTTGATATATCATGTGAATCTGAAGCCGATCGCAA 24 12402931 0.739951906 8 22 159 0.896551724 1.414973348 0.275862069 0.208333333 0.344827586 24 3 0 26 3L:12402911-12402960 6 29.5 2355 FBgn0052103 1942.393333 66.43 101.62 0.015187449 0.444076471 0.290297186 -3 -3 -3 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA 3L 12403209 12403214 - 3L_12403209_12403214_- 0.915287489 0.999153215 0.957220352 0.059302005 CG32103 FBtr0332090 12402293 12404054 3L - 12403051 12403451 3'utr CG32103 FlyBase G36377.1 AGTTCGTCCCATCCGACTGCTTTCGAAAGCGAATTAGCTTAGCATAAATCAGAGTGAGCCAGGCAGGCGGATTGCGAGTGGGAATCAGGTATCTGAAATCGAGGGATAGACGGATGGATACGGATACTCGGCAGCGTTTAAGCTTAAACACAAAAGACATTAAAACTACGATGTACTCGTTTTTGCTTAGATTAATCGATTACACAAAAAAATGAGAAACACTTAACGTTTACAATGTGATGATAATAGTTTATAATATACACATATAAATACATATAACTATACCTATACCTACTAAAATACCGACTTGTAAGCTTCAAATAGCTGTCGCAGTCTCTTGAGCAAGTTCGGCGGCGAGGCTGAAGAAAACTTTGTAGCATTTTATTTGTTAAGTTTAGTAA 255 12403221 0.887726428 61 235 1896 0.920792079 1.600506163 0.191419142 0.164705882 0.297029703 255 18 6 279 3L:12403051-12403451 6 CG32103 FBtr0332090 12402293 12404054 TGATGA 6mer3-8 dme-miR-2a-2-5p 3L - 12403062 12403240 3'utr CG32103 FlyBase G27481.1 ATGAGAAACACTTAACGTTTACAATGTGATGATAATAGTTTATAATATACACATATAAATACATATAACTATACCTATACCTACTAAAATACCGACTTGTAAGCTTCAAATAGCTGTCGCAGTCTCTTGAGCAAGTTCGGCGGCGAGGCTGAAGAAAACTTTGTAGCATTTTATTTGTT 145 12403208 0.987390968 33 134 1198 0.942477876 1.851258349 0.172566372 0.413793103 0.623893805 145 11 2 213 3L:12403062-12403240 6 102 2356 FBgn0052103 1942.393333 66.43 101.62 0.052512536 1.535450851 1.003739421 7 -6 0.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 12403695 12403700 - 3L_12403695_12403700_- 1 1 1 0 CG32103 FBtr0075982|FBtr0332090|FBtr0075983|FBtr0332089 12403503|12402293|12403503|12403503 12404054|12404054|12404054|12404054 3L - 12403625 12403745 3'utr CG32103 FlyBase G36379.1 TCTTAAAATATAAAATAAGTGATACTATGGCTAATTTATTTATAAACCAAACGCAAAGGAGAAAATGCAACATTTTGCCGTGTGCTAATCCCAAAACATTTCTTAGGCCAACAATCCTGCG 63 12403730 0.83280044 18 57 436 0.888888889 1.329058719 0.125 0.126984127 0.236111111 63 6 2 64 3L:12403625-12403745 6 CG32103 FBtr0332089|FBtr0075983|FBtr0332090|FBtr0075982 12403503|12403503|12402293|12403503 12404054|12404054|12404054|12404054 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 12403696 12403752 3'utr CG32103 FlyBase G27484.2 GTTATTTTCTTAAAATATAAAATAAGTGATACTATGGCTAATTTATTTATAAACCAA 31 12403730 0.859749123 7 29 238 0.947368421 1.556302501 0.026315789 0.225806452 0.368421053 31 2 0 36 3L:12403696-12403752 4 5 2357 FBgn0052103 1942.393333 66.43 101.62 0.002574144 0.075267199 0.049202913 30 30 30 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG 3L 12403920 12403925 - 3L_12403920_12403925_- 1 1 1 0 CG32103 FBtr0075982|FBtr0332090|FBtr0075983|FBtr0332089 12403503|12402293|12403503|12403503 12404054|12404054|12404054|12404054 3L - 12403828 12403946 3'utr CG32103 FlyBase G36380.2 GCGGCTGGTGATCCGGCTGACGCTGTGCTCCATTTTGTATAGTAGTAGCGTTAGGTTAAGTCGGCTCGGTGGTCGCCACTCGCTCTCTGCCGCAATGAGACAGTCTCGTGCTGCTTCTT 70 12403923 0.898326283 26 67 440 0.963414634 1.897627091 0.170731707 0.142857143 0.268292683 70 3 0 79 3L:12403828-12403946 6 CG32103 FBtr0332089|FBtr0075983|FBtr0332090|FBtr0075982 12403503|12403503|12402293|12403503 12404054|12404054|12404054|12404054 GCTGTG 6mer2-7 dme-miR-1008-3p 3L - 12403783 12403948 3'utr CG32103 FlyBase G27485.1 GTGCGGCTGGTGATCCGGCTGACGCTGTGCTCCATTTTGTATAGTAGTAGCGTTAGGTTAAGTCGGCTCGGTGGTCGCCACTCGCTCTCTGCCGCAATGAGACAGTCTCGTGCTGCTTCTTTCCTTAAGTGTAAAGCAGGCCTCTTCCACGTTCTGGGTTATCCGT 100 12403923 0.885428329 29 92 636 0.909722222 1.640150041 0.201388889 0.32 0.527777778 100 11 2 131 3L:12403783-12403948 6 25.5 2358 FBgn0052103 1942.393333 66.43 101.62 0.013128134 0.383862713 0.250934855 -2 -2 -2 0.01 dme-miR-999-3p 6mer2-7 GTTAAC 3L 12404020 12404025 - 3L_12404020_12404025_- 1 1 1 0 CG32103 FBtr0075982|FBtr0332090|FBtr0075983|FBtr0332089 12403503|12402293|12403503|12403503 12404054|12404054|12404054|12404054 3L - 12403953 12404085 stop_codon CG32103 FlyBase G36381.1 GAGTCGCGCCCTGGGCATTAAGATGTCGTGAGATGTCTGTCTTAATCTCGTTCCAATCAGGTTAACTCGGCTCGGCCCGGCCACCTCGGCTCTGCGGCCCCGCTCTGCAGGGCGGATCGGGCTGCGGCCGGGA 34 12404024 0.969390692 16 32 179 0.955555556 1.633468456 0.2 0.235294118 0.422222222 34 2 0 43 3L:12403953-12404085 6 CG32103 FBtr0332089|FBtr0075983|FBtr0332090|FBtr0075982 12403503|12403503|12402293|12403503 12404054|12404054|12404054|12404054 GTTAAC 6mer2-7 dme-miR-999-3p 3L - 12403953 12404147 stop_codon CG32103 FlyBase G27486.1 ACGCCAAACTTCCTCAAGGTCCTGCCGGCGGTGTCCATCAGCTACGTGGTGTACGAGTATACGAGTCGCGCCCTGGGCATTAAGATGTCGTGAGATGTCTGTCTTAATCTCGTTCCAATCAGGTTAACTCGGCTCGGCCCGGCCACCTCGGCTCTGCGGCCCCGCTCTGCAGGGCGGATCGGGCTGCGGCCGGGA 40 12404024 0.958947606 19 31 177 0.830508475 1.389166084 0.152542373 0.35 0.559322034 40 9 1 49 3L:12403953-12404147 6 15 2359 FBgn0052103 1942.393333 66.43 101.62 0.007722432 0.225801596 0.147608738 -1 -1 -1 0.01 dme-miR-932-5p 6mer2-7 GAATTG 3L 12415197 12415202 - 3L_12415197_12415202_- 1 1 1 0 ArfGAP1 FBtr0075981|FBtr0332088 12415024|12415024 12415335|12415335 3L - 12415185 12415329 3'utr ArfGAP1 FlyBase G36396.1 TGGCGAGCAGCTTATGCGATTGTATTTTTTGTATTCCATTCGGTTGTCAAGTTGTGTCTCCTTTGTTTTATGTGTCTCTTGATGTCTGGCCCCGAGGCTGCTATGCGCGCATTTAATGTAACCAACTGAATTGTGTATTCATTCT 18 12415213 0.992104708 12 16 165 0.9 0.954242509 0.1 0.111111111 0.2 18 1 1 18 3L:12415185-12415329 6 ArfGAP1 FBtr0332088|FBtr0075981 12415024|12415024 12415335|12415335 GAATTG 6mer2-7 dme-miR-932-5p 3L - 12415174 12415288 3'utr ArfGAP1 FlyBase G27502.1 GGTTGTCAAGTTGTGTCTCCTTTGTTTTATGTGTCTCTTGATGTCTGGCCCCGAGGCTGCTATGCGCGCATTTAATGTAACCAACTGAATTGTGTATTCATTCTTCGACTTCAAA 15 12415198 0.987314126 10 15 135 1 1.342422681 0.409090909 0.4 0.590909091 15 0 0 22 3L:12415174-12415288 6 5.5 2360 FBgn0020655 326.67 18.98666667 28.99333333 0.016836563 0.289676966 0.189698781 11 -4 3.5 0.01 dme-miR-8-3p 6mer3-8 CAGTAT 3L 1241811 1241816 - 3L_1241811_1241816_- 1 1 1 0 Klp61F FBtr0072733 1241566 1241967 3L - 1241773 1241918 3'utr Klp61F FlyBase G33227.1 TTAGTGGATTTCGGATCGCTGTGTTTGTTTGGCTCTTCTGGATATTCATTTTATCTGTATATCAATCTTTGGAATTTCGTACATTTATTATTTAAATAAACTCAGTATGCTATGTAAAGTTAAGGAAATCTTTAGTTCAAGTGCAG 16 1241813 0.989109591 14 15 147 0.909090909 1.301029996 0.227272727 0.25 0.454545455 16 2 0 20 3L:1241773-1241918 6 Klp61F FBtr0072733 1241566 1241967 CAGTAT 6mer3-8 dme-miR-8-3p 3L - 1241765 1241867 3'utr Klp61F FlyBase G25139.1 TATCTGTATATCAATCTTTGGAATTTCGTACATTTATTATTTAAATAAACTCAGTATGCTATGTAAAGTTAAGGAAATCTTTAGTTCAAGTGCAGGTTTAAGA 17 1241813 0.990546451 11 16 152 0.868421053 1.51851394 0.157894737 0.647058824 0.842105263 17 5 0 33 3L:1241765-1241867 6 7 2361 FBgn0004378 1433.893333 44.94333333 69.04666667 0.004881814 0.155751687 0.101380709 -3 -3 -3 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3L 1241894 1241899 - 3L_1241894_1241899_- 0.999578145 1 0.999789072 0.000298328 Klp61F FBtr0072733 1241566 1241967 3L - 1241773 1241918 3'utr Klp61F FlyBase G33227.1 TTAGTGGATTTCGGATCGCTGTGTTTGTTTGGCTCTTCTGGATATTCATTTTATCTGTATATCAATCTTTGGAATTTCGTACATTTATTATTTAAATAAACTCAGTATGCTATGTAAAGTTAAGGAAATCTTTAGTTCAAGTGCAG 16 1241896 0.989109591 14 15 147 0.909090909 1.301029996 0.227272727 0.25 0.454545455 16 2 0 20 3L:1241773-1241918 6 Klp61F FBtr0072733 1241566 1241967 TGTGTT 6mer3-8 dme-miR-317-3p 3L - 1241886 1241930 3'utr Klp61F FlyBase G25140.1 AACCCGTTTATGTTAGTGGATTTCGGATCGCTGTGTTTGTTTGGC 7 1241893 0.990597254 6 7 65 1 1.041392685 0.181818182 0.571428571 0.727272727 7 0 0 11 3L:1241886-1241930 6 4.5 2362 FBgn0004378 1433.893333 44.94333333 69.04666667 0.003138309 0.100126085 0.065173313 -3 -6 -4.5 0.01 dme-miR-986-5p 6mer3-8 ATTCGA 3L 1241958 1241963 - 3L_1241958_1241963_- 1 1 1 0 Klp61F FBtr0072733 1241566 1241967 3L - 1241919 1241988 stop_codon Klp61F FlyBase G33228.1 AACAAAGAAAACGTAGCCTGATTGCATTCGATGACAGTAGTAGTCTCCCCTTCCCAGTAACCCGTTTATG 31 1241967 0.957087518 8 31 185 1 1.505149978 0.125 0.032258065 0.0625 31 0 0 32 3L:1241919-1241988 6 Klp61F FBtr0072733 1241566 1241967 ATTCGA 6mer3-8 dme-miR-986-5p 3L - 1241949 1241985 stop_codon Klp61F FlyBase G25141.1 AAAGAAAACGTAGCCTGATTGCATTCGATGACAGTAG 14 1241967 0.799088317 3 14 65 1 1.322219295 0.047619048 0.285714286 0.523809524 14 0 0 21 3L:1241949-1241985 6 10 2363 FBgn0004378 1433.893333 44.94333333 69.04666667 0.006974019 0.22250241 0.144829584 4 4 4 0.01 dme-miR-282-5p 7mer-m8 AGAGGCT 3L 12474943 12474949 - 3L_12474943_12474949_- 0.631524569 0.631524569 0.631524569 0 CG10663 FBtr0346570|FBtr0113167 12474416|12474693 12475006|12475006 3L - 12474927 12474956 3'utr CG10663 FlyBase G36401.1 AAGTTGCAGAGGCTGTGAAAAACTAATTTA 14 12474953 0.718193932 3 9 58 0.625 1 0.0625 0.142857143 0.25 14 6 0 10 3L:12474927-12474956 7 CG10663 FBtr0113167|FBtr0346570 12474693|12474416 12475006|12475006 AGAGGCT 7mer-m8 dme-miR-282-5p 3L - 12474930 12474979 3'utr CG10663 FlyBase G27508.1 GTAGACATGGACTTGGGTCCGCTAAGTTGCAGAGGCTGTGAAAAACTAAT 19 12474953 0.82769006 4 14 72 0.80952381 0.929418926 0.238095238 0.105263158 0.19047619 19 3 1 17 3L:12474930-12474979 7 14 2364 FBgn0036287 1.21 0.05 0.08 11.57024793 280 175 4 4 4 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 12492038 12492043 - 3L_12492038_12492043_- 1 1 1 0 CG10657 FBtr0075975 12491828 12492142 3L - 12492026 12492067 3'utr CG10657 FlyBase G36406.1 AAGACGCGCGGGCATGCACACTTCGTACCTATTTAAAAGCAT 14 12492036 0.981318448 3 12 91 0.857142857 1.079181246 0.142857143 0 0 14 2 0 12 3L:12492026-12492067 6 CG10657 FBtr0075975 12491828 12492142 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L - 12491978 12492068 3'utr CG10657 FlyBase G27511.1 CAAGACGCGCGGGCATGCACACTTCGTACCTATTTAAAAGCATCACCACTAAGTTGTATAACTACGGTCTCGCGGGAACTGTGACTCCCTC 7 12492046 0.977150911 6 7 46 1 1.041392685 0.545454545 0.428571429 0.636363636 7 0 0 11 3L:12491978-12492068 6 9 2365 FBgn0036289 3.616666667 0.283333333 0.423333333 2.488479263 31.76470588 21.25984252 -7 3 -2 0.01 dme-miR-184-3p 8mer-A1 TCCGTCCA 3L 12498321 12498328 - 3L_12498321_12498328_- 0.631136385 0.631136385 0.631136385 0 CG10638 FBtr0345350 12498104 12498489 3L - 12498306 12498346 3'utr CG10638 FlyBase G36408.1 TTGATGTTCTCCATGAAATCCGTCCAGTTGCCAACGATCCG 8 12498319 0.787131608 2 8 52 1 1.079181246 0.083333333 0.25 0.5 8 0 0 12 3L:12498306-12498346 8 CG10638 FBtr0345350 12498104 12498489 TCCGTCCA 8mer-A1 dme-miR-184-3p 3L - 12498306 12498345 3'utr CG10638 FlyBase G27512.1 TGATGTTCTCCATGAAATCCGTCCAGTTGCCAACGATCCG 8 12498319 0.821608947 2 7 56 0.888888889 0.903089987 0.222222222 0.125 0.222222222 8 1 0 8 3L:12498306-12498345 8 7.5 2366 FBgn0036290 899.4033333 100.2333333 154.43 0.008338862 0.074825407 0.048565693 -9 -9 -9 0.01 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 1250109 1250115 + 3L_1250109_1250115_+ 0.823349562 0.823349562 0.823349562 0 Sac1 FBtr0303217|FBtr0072652 1250068|1250068 1250451|1250451 3L + 1250076 1250142 3'utr Sac1 FlyBase G26994.1 TGTCGTCTAGCAGAGTCACTGGGAACTACCTCTGCAGCTAAACTGTCCCATTGCTCCGAGAAAGAAC 16 1250108 0.963364916 5 15 80 0.941176471 1.204119983 0.294117647 0.0625 0.117647059 16 1 0 16 3L:1250076-1250142 7 Sac1 FBtr0303217|FBtr0072652 1250068|1250068 1250451|1250451 GCAGCTA 7mer-A1 dme-miR-980-3p 3L + 1250077 1250153 3'utr Sac1 FlyBase G20435.1 GTCGTCTAGCAGAGTCACTGGGAACTACCTCTGCAGCTAAACTGTCCCATTGCTCCGAGAAAGAACAATTGTAAACC 13 1250107 0.969472889 6 12 71 0.944444444 1.230448921 0.166666667 0.307692308 0.5 13 1 0 17 3L:1250077-1250153 7 12 2367 FBgn0035195 492.1933333 25.24666667 38.54333333 0.024380663 0.475310272 0.311337888 1 2 1.5 0.01 dme-miR-988-3p 6mer3-8 ACAAGG 3L 12502559 12502564 + 3L_12502559_12502564_+ 1 1 1 0 CG10681 FBtr0075957|FBtr0332634 12502474|12502474 12502647|12502647 3L + 12502538 12502615 3'utr CG10681 FlyBase G29761.1 TTGTATAACCTGCTACTACATACAAGGACACAATTCGTTTAGTTAGATTTAAATGAAATATGCGTAATAATTTAAGAA 6 12502558 0.979081046 4 6 43 1 0.77815125 0 0 0 6 0 0 6 3L:12502538-12502615 6 CG10681 FBtr0332634|FBtr0075957 12502474|12502474 12502647|12502647 ACAAGG 6mer3-8 dme-miR-988-3p 3L + 12502539 12502571 3'utr CG10681 FlyBase G22530.1 TGTATAACCTGCTACTACATACAAGGACACAAT 8 12502557 0.936367957 4 7 30 0.9 0.954242509 0.1 0.25 0.4 8 1 0 9 3L:12502539-12502571 6 5.5 2368 FBgn0036291 74.39 9.18 14.21333333 0.073934669 0.59912854 0.3869606 1 2 1.5 0.01 dme-miR-1007-3p 6mer2-7 GAGCTT 3L 1250291 1250296 + 3L_1250291_1250296_+ 1 1 1 0 Sac1 FBtr0303217|FBtr0072652 1250068|1250068 1250451|1250451 3L + 1250244 1250307 3'utr Sac1 FlyBase G26996.1 TCTGCAACTTGTTAGTCATTATATACACAGATCACTTACACTTAGGCGAGCTTCAGGCGGCTGG 38 1250279 0.782173147 7 37 222 0.978723404 1.662757832 0.382978723 0.236842105 0.382978723 38 1 0 46 3L:1250244-1250307 6 Sac1 FBtr0303217|FBtr0072652 1250068|1250068 1250451|1250451 GAGCTT 6mer2-7 dme-miR-1007-3p 3L + 1250245 1250306 3'utr Sac1 FlyBase G20436.1 CTGCAACTTGTTAGTCATTATATACACAGATCACTTACACTTAGGCGAGCTTCAGGCGGCTG 22 1250279 0.967479026 6 22 120 1 1.477121255 0.566666667 0.318181818 0.5 22 0 0 30 3L:1250245-1250306 6 20 2369 FBgn0035195 492.1933333 25.24666667 38.54333333 0.040634439 0.792183787 0.51889648 12 12 12 0.01 dme-miR-92b-3p 6mer2-7 TGCAAT 3L 1250382 1250387 + 3L_1250382_1250387_+ 1 1 1 0 Sac1 FBtr0303217|FBtr0072652 1250068|1250068 1250451|1250451 3L + 1250343 1250388 3'utr Sac1 FlyBase G26997.2 GTGGAGTTGTGAAGGCGCCGCTTATTAACTGCGATTAACTGCAATG 26 1250368 0.74744521 6 25 170 0.964285714 1.130333768 0.321428571 0.076923077 0.142857143 26 0 1 27 3L:1250343-1250388 6 Sac1 FBtr0303217|FBtr0072652 1250068|1250068 1250451|1250451 TGCAAT 6mer2-7 dme-miR-92b-3p 3L + 1250351 1250386 3'utr Sac1 FlyBase G20438.1 GTGAAGGCGCCGCTTATTAACTGCGATTAACTGCAA 14 1250368 0.958121976 4 14 97 1 1.380211242 0.291666667 0.571428571 0.75 14 0 0 24 3L:1250351-1250386 5 15.5 2370 FBgn0035195 492.1933333 25.24666667 38.54333333 0.03149169 0.613942435 0.402144772 14 14 14 0.01 dme-miR-970-3p 7mer-m8 TCTTATG 3L 12505366 12505372 + 3L_12505366_12505372_+ 0.658999343 0.658999343 0.658999343 0 vih FBtr0075958 12505147 12505821 3L + 12505323 12505382 3'utr vih FlyBase G29767.1 CGTTCAATGCTGATAGTTCATTTGGCAAAAGACCCCGTGCGTTTCTTATGTAATTGTCGA 6 12505364 0.98410851 5 6 47 1 0.77815125 0.333333333 0 0 6 0 0 6 3L:12505323-12505382 7 vih FBtr0075958 12505147 12505821 TCTTATG 7mer-m8 dme-miR-970-3p 3L + 12505352 12505378 3'utr vih FlyBase G22535.1 AGACCCCGTGCGTTTCTTATGTAATTG 5 12505365 0.833956576 3 5 37 1 0.84509804 0.428571429 0.4 0.571428571 5 0 0 7 3L:12505352-12505378 7 4.5 2371 FBgn0264848 630.4033333 52.49 79.89666667 0.007138287 0.085730615 0.05632275 2 1 1.5 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 12505632 12505637 + 3L_12505632_12505637_+ 1 1 1 0 vih FBtr0075958 12505147 12505821 3L + 12505604 12505650 3'utr vih FlyBase G29770.1 AAGCGACTATGCTGCTGCGCCGGCCATTATGTGAATGTTAGCTAATT 25 12505631 0.691748466 7 25 173 1 1.491361694 0.193548387 0.2 0.35483871 25 0 0 31 3L:12505604-12505650 6 vih FBtr0075958 12505147 12505821 ATGTGA 6mer3-8 dme-miR-1003-3p 3L + 12505594 12505648 3'utr vih FlyBase G22537.1 GATGATTTTTAAGCGACTATGCTGCTGCGCCGGCCATTATGTGAATGTTAGCTAA 18 12505639 0.627681633 7 17 120 0.96969697 1.505149978 0 0.444444444 0.696969697 18 1 0 32 3L:12505594-12505648 6 17.5 2372 FBgn0264848 630.4033333 52.49 79.89666667 0.027760005 0.333396837 0.219032918 1 -7 -3 0.01 dme-miR-304-5p 7mer-m8 TGAGATT 3L 12508106 12508112 - 3L_12508106_12508112_- 0.620203442 0.620203442 0.620203442 0 sti FBtr0075970|FBtr0332643 12507996|12507996 12508356|12508356 3L - 12508091 12508129 3'utr sti FlyBase G36418.1 TATACACAAATAAAACTTGAGATTTTGATAAAAAAGGTA 16 12508113 0.809919574 4 15 104 1 1.278753601 0 0.1875 0.315789474 16 0 0 19 3L:12508091-12508129 7 sti FBtr0075970|FBtr0332643 12507996|12507996 12508356|12508356 TGAGATT 7mer-m8 dme-miR-304-5p 3L - 12508100 12508140 3'utr sti FlyBase G27519.1 ACTTTGTGCTGTATACACAAATAAAACTTGAGATTTTGATA 9 12508113 0.853816163 3 9 69 1 1.113943352 0 0.333333333 0.538461538 9 0 0 13 3L:12508100-12508140 7 11.5 2373 FBgn0002466 1895.133333 37.79 58.17333333 0.006068175 0.30431331 0.197685079 1 1 1 0.01 dme-miR-932-5p 7mer-A1 GAATTGA 3L 12519225 12519231 + 3L_12519225_12519231_+ 0.731659037 0.731659037 0.731659037 0 tral FBtr0332635|FBtr0332642|FBtr0332636|FBtr0332641|FBtr0332638|FBtr0332639|FBtr0332637|FBtr0332640|FBtr0075959 12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150 12520954|12519695|12519695|12519695|12519695|12519695|12520954|12519695|12519695 3L + 12519186 12519246 3'utr tral FlyBase G29788.1 ACACCAACCACAACCAACAAACCACAAATTGATAGATGCGAATTGAGAAGAGCGTAAAGTA 10 12519228 0.943966455 5 9 37 1 1.041392685 0.363636364 0.222222222 0.363636364 9 0 0 11 3L:12519186-12519246 7 tral FBtr0332639|FBtr0332637|FBtr0332640|FBtr0075959|FBtr0332635|FBtr0332636|FBtr0332642|FBtr0332641|FBtr0332638 12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150 12519695|12520954|12519695|12519695|12520954|12519695|12519695|12519695|12519695 GAATTGA 7mer-A1 dme-miR-932-5p 3L + 12519151 12519245 3'utr tral FlyBase G22544.1 GTGCCGCCCGGCCAGTGGAAAGCCACTTTAAATATACACCAACCACAACCAACAAACCACAAATTGATAGATGCGAATTGAGAAGAGCGTAAAGT 8 12519228 0.937618104 7 7 31 1 1.113943352 0.384615385 0.5 0.692307692 8 0 0 13 3L:12519151-12519245 7 6 2374 FBgn0041775 2554.613333 85.08333333 130.6233333 0.002348692 0.070519099 0.0459336 -3 -3 -3 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 12519509 12519514 + 3L_12519509_12519514_+ 1 0.999999752 0.999999876 1.41E-07 tral FBtr0332635|FBtr0332642|FBtr0332636|FBtr0332641|FBtr0332638|FBtr0332639|FBtr0332637|FBtr0332640|FBtr0075959 12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150 12520954|12519695|12519695|12519695|12519695|12519695|12520954|12519695|12519695 3L + 12519463 12519526 3'utr tral FlyBase G29790.1 AGCGCTCTACGATTCGATTAATGATTAGCGACTAGCGCGAATGTGAATGTGAATGTGAACCGAA 24 12519509 0.966297742 10 22 121 0.925925926 1.096910013 0.444444444 0.125 0.222222222 24 1 1 25 3L:12519463-12519526 6 tral FBtr0332639|FBtr0332637|FBtr0332640|FBtr0075959|FBtr0332635|FBtr0332636|FBtr0332642|FBtr0332641|FBtr0332638 12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150 12519695|12520954|12519695|12519695|12520954|12519695|12519695|12519695|12519695 ATGTGA 6mer3-8 dme-miR-1003-3p 3L + 12519471 12519518 3'utr tral FlyBase G22547.1 ACGATTCGATTAATGATTAGCGACTAGCGCGAATGTGAATGTGAATGT 15 12519488 0.82186454 7 15 89 1 1.322219295 0.476190476 0.266666667 0.476190476 15 0 0 21 3L:12519471-12519518 6 14.5 2375 FBgn0041775 2554.613333 85.08333333 130.6233333 0.005676006 0.170421156 0.111006201 0 21 10.5 0.01 dme-miR-304-5p 6mer2-7 GAGATT 3L 12519745 12519750 + 3L_12519745_12519750_+ 1 1 1 0 tral FBtr0332635|FBtr0332637 12519150|12519150 12520954|12520954 3L + 12519710 12519771 3'utr tral FlyBase G29793.1 AACGAAAGCAACCATTTAGCAAGGAGAGGAGCAAGGAGATTTGGCGGAGGAGCCGATAACAA 13 12519750 0.826712978 5 12 27 1 1.176091259 0.333333333 0.153846154 0.266666667 13 0 0 15 3L:12519710-12519771 6 tral FBtr0332637|FBtr0332635 12519150|12519150 12520954|12520954 GAGATT 6mer2-7 dme-miR-304-5p 3L + 12519715 12519765 3'utr tral FlyBase G22549.1 AAGCAACCATTTAGCAAGGAGAGGAGCAAGGAGATTTGGCGGAGGAGCCGA 7 12519750 0.910538684 4 4 11 0.636363636 0.84509804 0 0.571428571 0.727272727 7 4 0 7 3L:12519715-12519765 6 8 2376 FBgn0041775 2554.613333 85.08333333 130.6233333 0.003131589 0.094025465 0.061244801 -5 -5 -5 0.01 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 12519998 12520005 + 3L_12519998_12520005_+ 0.668734347 0.668734347 0.668734347 0 tral FBtr0332635|FBtr0332637 12519150|12519150 12520954|12520954 3L + 12519982 12520021 3'utr tral FlyBase G29795.1 AAAAGAAAATAAAATCGGCAGCTACGCGCTTCTATCAAAA 104 12519996 0.895315589 5 91 412 0.872 1.560305243 0.072 0.153846154 0.296 104 14 2 109 3L:12519982-12520021 8 tral FBtr0332637|FBtr0332635 12519150|12519150 12520954|12520954 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L + 12519981 12520026 3'utr tral FlyBase G22550.1 AAAAAGAAAATAAAATCGGCAGCTACGCGCTTCTATCAAAAGCACA 67 12519996 0.857844646 5 63 246 0.978947368 1.968482949 0.178947368 0.313432836 0.515789474 67 2 0 93 3L:12519981-12520026 8 84.5 2377 FBgn0041775 2554.613333 85.08333333 130.6233333 0.033077413 0.993143976 0.646898206 2 2 2 0.01 dme-bantam-3p 7mer-m8 TGATCTC 3L 12520197 12520203 + 3L_12520197_12520203_+ 0.661615243 0.661615243 0.661615243 0 tral FBtr0332635|FBtr0332637 12519150|12519150 12520954|12520954 3L + 12520159 12520222 3'utr tral FlyBase G29796.1 AAGCCCAAATTTTCGGTTTTCGTACAGTTTATTTTCTCTGATCTCGGTTGGGCAAGGGAAATTA 88 12520197 0.99033327 8 82 827 0.922330097 1.67669361 0.27184466 0.125 0.252427184 88 7 1 95 3L:12520159-12520222 7 tral FBtr0332637|FBtr0332635 12519150|12519150 12520954|12520954 TGATCTC 7mer-m8 dme-bantam-3p 3L + 12520172 12520231 3'utr tral FlyBase G22551.1 CGGTTTTCGTACAGTTTATTTTCTCTGATCTCGGTTGGGCAAGGGAAATTATACTTACGA 50 12520197 0.978167442 8 46 513 0.898734177 1.550228353 0.443037975 0.42 0.632911392 50 7 1 71 3L:12520172-12520231 7 68 2378 FBgn0041775 2554.613333 85.08333333 130.6233333 0.02661851 0.799216454 0.520580805 0 0 0 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA 3L 12520266 12520271 + 3L_12520266_12520271_+ 1 1 1 0 tral FBtr0332635|FBtr0332637 12519150|12519150 12520954|12520954 3L + 12520243 12520329 3'utr tral FlyBase G29797.1 TTGAAAAGATACGATACCTATGGTGATGATGTTCTCAATGTAAATGTTAAGATTGATTGTGTGATTCACTGGCTGCTGCGCTTGAAA 41 12520271 0.737726945 12 36 333 0.894736842 1.707570176 0.333333333 0.341463415 0.526315789 41 6 0 51 3L:12520243-12520329 6 tral FBtr0332637|FBtr0332635 12519150|12519150 12520954|12520954 TGATGA 6mer3-8 dme-miR-2a-2-5p 3L + 12520247 12520327 3'utr tral FlyBase G22552.1 AAAGATACGATACCTATGGTGATGATGTTCTCAATGTAAATGTTAAGATTGATTGTGTGATTCACTGGCTGCTGCGCTTGA 45 12520270 0.721657385 13 40 387 0.87654321 1.152288344 0.37037037 0.444444444 0.691358025 45 6 4 71 3L:12520247-12520327 6 30 2379 FBgn0041775 2554.613333 85.08333333 130.6233333 0.01174346 0.352595495 0.229668002 -5 -4 -4.5 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 12527471 12527477 - 3L_12527471_12527477_- 0.661615645 0.661615645 0.661615645 0 nst FBtr0075967 12527213 12527630 3L - 12527448 12527501 3'utr nst FlyBase G36463.1 ATTCTGCAAATGTTCACTGTCTTTTGTGTTCTAAAGATGACATATTTTTTGCCA 25 12527478 0.659621256 8 25 263 1 1.431363764 0.074074074 0.08 0.148148148 25 0 0 27 3L:12527448-12527501 7 nst FBtr0075967 12527213 12527630 TGTGTTC 7mer-m8 dme-miR-317-3p 3L - 12527434 12527632 stop_codon nst FlyBase G27549.1 AGAGCGGAATGACGAACTAACCTCTCACGGGAATCGACAATTGACACAGATCCTGGATGGAGCAATAAATCTCTTTACTCTAAGGTGCTCAATAACTTAAAAAAAAAACAACTTAACTCTCAAACGCATTTATTCTGCAAATGTTCACTGTCTTTTGTGTTCTAAAGATGACATATTTTTTGCCATTATTTATAAAGTT 42 12527478 0.985356046 20 39 326 0.967213115 1.770852012 0.196721311 0.30952381 0.524590164 42 2 0 59 3L:12527434-12527632 7 19 2380 FBgn0036298 243.65 13.55666667 20.85333333 0.07798071 1.401524465 0.91112532 1 1 1 0.01 "dme-miR-995-3p,dme-miR-998-3p" 6mer2-7 GGTGCT 3L 12527544 12527549 - 3L_12527544_12527549_- 1 1 1 0 nst FBtr0075967 12527213 12527630 3L - 12527506 12527595 3'utr nst FlyBase G36464.1 CAATTGACACAGATCCTGGATGGAGCAATAAATCTCTTTACTCTAAGGTGCTCAATAACTTAAAAAAAAAACAACTTAACTCTCAAACGC 26 12527559 0.987831783 9 22 190 0.6875 1.342422681 0.125 0.115384615 0.28125 26 10 0 22 3L:12527506-12527595 6 nst FBtr0075967 12527213 12527630 GGTGCT 6mer2-7 "dme-miR-995-3p,dme-miR-998-3p" 3L - 12527434 12527632 stop_codon nst FlyBase G27549.1 AGAGCGGAATGACGAACTAACCTCTCACGGGAATCGACAATTGACACAGATCCTGGATGGAGCAATAAATCTCTTTACTCTAAGGTGCTCAATAACTTAAAAAAAAAACAACTTAACTCTCAAACGCATTTATTCTGCAAATGTTCACTGTCTTTTGTGTTCTAAAGATGACATATTTTTTGCCATTATTTATAAAGTT 42 12527558 0.985356046 20 39 326 0.967213115 1.770852012 0.196721311 0.30952381 0.524590164 42 2 0 59 3L:12527434-12527632 6 11 2381 FBgn0036298 243.65 13.55666667 20.85333333 0.045146727 0.811408901 0.527493606 10 9 9.5 0.01 dme-miR-184-3p 7mer-m8 TCCGTCC 3L 12530631 12530637 - 3L_12530631_12530637_- 0.661615243 0.661615243 0.661615243 0 Tsf2 FBtr0075966 12530434 12530747 3L - 12530554 12530742 3'utr Tsf2 FlyBase G36473.2 TAGACTCACTTAGATTTCAGAATTCTACAAGCATCTCTAGCACAAAGAGAAAACATATCAACATTTTTACATTCCAAATATGATTAAGTTAAATGTGAAATCCCTTCCGTCCGAAAATGAAACTCTAACTAGCCGAAAAATATCTGTTGAAGGCTATAGTTTATAATTTATAAAGTCCTGTGCCTTATT 1471 12530638 0.902688607 34 1430 6990 0.982896847 2.565611725 0.631747728 0.205982325 0.375734901 1471 28 4 1839 3L:12530554-12530742 7 Tsf2 FBtr0075966 12530434 12530747 TCCGTCC 7mer-m8 dme-miR-184-3p 3L - 12530609 12530744 3'utr Tsf2 FlyBase G27552.3 ACTAGACTCACTTAGATTTCAGAATTCTACAAGCATCTCTAGCACAAAGAGAAAACATATCAACATTTTTACATTCCAAATATGATTAAGTTAAATGTGAAATCCCTTCCGTCCGAAAATGAAACTCTAACTAGCC 1090 12530638 0.936300892 17 1075 4916 0.981976383 2.420505837 0.617153511 0.351376147 0.560596644 1090 24 5 1580 3L:12530609-12530744 7 1192 2382 FBgn0036299 169.6666667 7.166666667 11.03333333 7.025540275 166.3255814 108.0362538 1 1 1 0.01 dme-miR-8-3p 6mer2-7 AGTATT 3L 12537736 12537741 - 3L_12537736_12537741_- 1 1 1 0 sowah FBtr0300889|FBtr0300888|FBtr0300887 12537511|12537511|12537511 12537814|12537814|12538184 3L - 12537724 12537762 3'utr sowah FlyBase G36484.1 CATTGACCATGGAATCGTGAAAGTATTTGTTTTTCAATT 9 12537735 0.804740307 5 9 76 1 1 0.5 0.111111111 0.2 9 0 0 10 3L:12537724-12537762 6 sowah FBtr0300887|FBtr0300888|FBtr0300889 12537511|12537511|12537511 12538184|12537814|12537814 AGTATT 6mer2-7 dme-miR-8-3p 3L - 12537728 12537759 3'utr sowah FlyBase G27558.1 TGACCATGGAATCGTGAAAGTATTTGTTTTTC 7 12537745 0.738529573 4 7 59 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 3L:12537728-12537759 6 8 2383 FBgn0036302 1488.053333 89.81666667 136.7766667 0.005376151 0.089070328 0.058489508 -6 4 -1 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3L 12733404 12733409 - 3L_12733404_12733409_- 1 1 1 0 SmD1 FBtr0075952 12733362 12733622 3L - 12733383 12733418 3'utr SmD1 FlyBase G36501.1 AATTGAAAGAAGACTCCCGCCATTAAATTATGATTA 101 12733395 0.636262294 6 29 502 0.276422764 1.230448921 0.43902439 0.178217822 0.325203252 101 88 1 34 3L:12733383-12733418 6 SmD1 FBtr0075952 12733362 12733622 AAGACT 6mer3-8 dme-miR-14-3p 3L - 12733382 12733419 3'utr SmD1 FlyBase G27569.1 AAATTGAAAGAAGACTCCCGCCATTAAATTATGATTAA 67 12733395 0.616064577 7 25 315 0.380434783 1.243038049 0.347826087 0.28358209 0.47826087 67 56 1 35 3L:12733382-12733419 6 84 2384 FBgn0261933 352.4666667 62.25333333 95.13333333 0.238320409 1.349325337 0.882971268 -14 -14 -14 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 3L 12741059 12741064 + 3L_12741059_12741064_+ 0.999997806 1 0.999998903 1.56E-06 Ptp69D FBtr0075914|FBtr0075913 12740996|12740996 12741568|12741568 3L + 12741013 12741082 3'utr Ptp69D FlyBase G29832.1 ACTTATACGAGTACAGAATGCACGTGTTGGAACATCAATGCATCAAATGTGCTATGATAAATTATTTGTA 63 12741060 0.824824042 10 61 449 0.971014493 1.348953548 0.072463768 0.095238095 0.173913043 63 0 2 67 3L:12741013-12741082 6 Ptp69D FBtr0075914|FBtr0075913 12740996|12740996 12741568|12741568 ATGTGC 6mer3-8 dme-miR-305-3p 3L + 12741015 12741083 3'utr Ptp69D FlyBase G22575.1 TTATACGAGTACAGAATGCACGTGTTGGAACATCAATGCATCAAATGTGCTATGATAAATTATTTGTAT 34 12741060 0.985104445 7 32 260 0.964285714 1.73239376 0.214285714 0.441176471 0.660714286 34 2 0 54 3L:12741015-12741083 6 41 2385 FBgn0014007 2746.713333 63.97333333 98.05 0.014926931 0.640892038 0.418154003 -1 -1 -1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 3L 12741211 12741217 + 3L_12741211_12741217_+ 0.671796082 0.671796082 0.671796082 0 Ptp69D FBtr0075914|FBtr0075913 12740996|12740996 12741568|12741568 3L + 12741178 12741237 3'utr Ptp69D FlyBase G29833.1 AATGTAGTGTATACGTATCGTATTGATAAAACTACCAAAGGAAAATAAGTAACATATTTT 78 12741210 0.966222122 5 77 212 0.978494624 1.959041392 0.010752688 0.153846154 0.290322581 78 2 0 91 3L:12741178-12741237 7 Ptp69D FBtr0075914|FBtr0075913 12740996|12740996 12741568|12741568 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 12741193 12741224 3'utr Ptp69D FlyBase G22576.1 TATCGTATTGATAAAACTACCAAAGGAAAATA 53 12741210 0.954896332 3 51 117 0.95890411 1.367976785 0.01369863 0.339622642 0.520547945 53 1 2 70 3L:12741193-12741224 7 64.5 2386 FBgn0014007 2746.713333 63.97333333 98.05 0.023482611 1.008232597 0.657827639 1 1 1 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 3L 12746555 12746560 + 3L_12746555_12746560_+ 1 1 1 0 CG32109 FBtr0075918 12746477 12746770 3L + 12746525 12746582 3'utr CG32109 FlyBase G29838.1 AATAATAAATGTTAAGCTGATTCCACTGTAATGTGCTATATCTGGTCCGTATTTTTGG 24 12746557 0.997597545 8 11 234 0.53125 0.929418926 0.09375 0.25 0.4375 24 14 1 17 3L:12746525-12746582 6 CG32109 FBtr0075918 12746477 12746770 ATGTGC 6mer3-8 dme-miR-305-3p 3L + 12746534 12746574 3'utr CG32109 FlyBase G22580.1 TGTTAAGCTGATTCCACTGTAATGTGCTATATCTGGTCCGT 14 12746556 0.998342382 5 6 133 0.3 0.954242509 0 0.714285714 0.866666667 14 21 0 9 3L:12746534-12746574 6 16.5 2387 FBgn0052109 192.0866667 22.89 35.27333333 0.085898726 0.720838794 0.467775468 -2 -1 -1.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 12746628 12746633 - 3L_12746628_12746633_- 1 1 1 0 Klc FBtr0075951|FBtr0331556|FBtr0331555 12746614|12746614|12746614 12746812|12746812|12746812 3L - 12746618 12746675 3'utr Klc FlyBase G36504.1 TACCTTGTTATTTCAAAAAATATGTACCGCTTTTAATAATAAACCAAATATATTTAAC 6 12746643 0.985718879 6 6 45 1 0.954242509 0 0.5 0.666666667 6 0 0 9 3L:12746618-12746675 6 Klc FBtr0331556|FBtr0331555|FBtr0075951 12746614|12746614|12746614 12746812|12746812|12746812 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 12746631 12746662 3'utr Klc FlyBase G27572.1 CAAAAAATATGTACCGCTTTTAATAATAAACC 7 12746643 0.540592785 4 6 48 0.909090909 1 0.090909091 0.571428571 0.727272727 7 1 0 10 3L:12746631-12746662 2 3.5 2388 FBgn0010235 1734.466667 114.96 176.2933333 0.002017911 0.030445372 0.019853275 10 10 10 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 3L 12784674 12784679 - 3L_12784674_12784679_- 1 1 1 0 Atg1 FBtr0075945 12784427 12785336 3L - 12784649 12784736 3'utr Atg1 FlyBase G36532.1 TTATATTATAAACATACCATACAATATTGATGGCTGCACTACACAAACATGTTTACAATGTGCTATGTTCATAGTTTTTAGTTAGGTC 40 12784704 0.786161801 15 37 296 0.955555556 1.633468456 0.177777778 0.05 0.155555556 40 2 0 43 3L:12784649-12784736 6 Atg1 FBtr0075945 12784427 12785336 ATGTGC 6mer3-8 dme-miR-305-3p 3L - 12784643 12784737 3'utr Atg1 FlyBase G27592.1 ATTATATTATAAACATACCATACAATATTGATGGCTGCACTACACAAACATGTTTACAATGTGCTATGTTCATAGTTTTTAGTTAGGTCTTTTCT 25 12784678 0.895281766 6 23 198 0.96969697 1.505149978 0.151515152 0.24 0.424242424 25 1 0 32 3L:12784643-12784737 6 10.5 2389 FBgn0260945 853.22 25.63333333 39.42333333 0.012306322 0.409622887 0.266339731 25 -1 12 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3L 12785223 12785229 - 3L_12785223_12785229_- 0.443128743 0.443128539 0.443128641 1.41E-07 Atg1 FBtr0075945|FBtr0300561 12784427|12785129 12785336|12785336 3L - 12785177 12785254 3'utr Atg1 FlyBase G36537.1 ACCGTTTTCGTTGGGAGTGCAAACATGTGATTGAAACAAAAACTACACTATCCATACATAGACATACCTACAAATAAT 246 12785223 0.968868263 10 231 1275 0.950177936 1.949390007 0.387900356 0.134146341 0.241992883 246 12 2 267 3L:12785177-12785254 7 Atg1 FBtr0075945|FBtr0300561 12784427|12785129 12785336|12785336 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 12785186 12785252 3'utr Atg1 FlyBase G27596.1 CGTTTTCGTTGGGAGTGCAAACATGTGATTGAAACAAAAACTACACTATCCATACATAGACATACCT 180 12785223 0.966771843 6 173 932 0.96819788 2.437750563 0.395759717 0.416666667 0.628975265 180 9 0 274 3L:12785186-12785252 7 205 2390 FBgn0260945 853.22 25.63333333 39.42333333 0.240266285 7.99739922 5.199966179 -6 -6 -6 0.01 dme-miR-79-3p 8mer-A1 TAGCTTTA 3L 12796035 12796042 + 3L_12796035_12796042_+ 0.625364009 0.625364009 0.625364009 0 CG42709 FBtr0302980|FBtr0302981|FBtr0302982|FBtr0344221 12795611|12795611|12795611|12795611 12796084|12796084|12796084|12796084 3L + 12796010 12796059 3'utr CG42709 FlyBase G29865.1 GTAAACCCATAGATACACTAGTTGTTAGCTTTAGACTTTTGCCAAAATAC 8 12796048 0.988253208 5 8 76 1 1 0 0.25 0.4 8 0 0 10 3L:12796010-12796059 8 CG42709 FBtr0344221|FBtr0302982|FBtr0302981|FBtr0302980 12795611|12795611|12795611|12795611 12796084|12796084|12796084|12796084 TAGCTTTA 8mer-A1 dme-miR-79-3p 3L + 12796026 12796064 3'utr CG42709 FlyBase G22603.1 ACTAGTTGTTAGCTTTAGACTTTTGCCAAAATACAATAA 5 12796048 0.986723561 2 5 48 1 0.698970004 0 0 0 5 0 0 5 3L:12796026-12796064 8 6.5 2391 FBgn0261674 613.0033333 33.86666667 51.98 0.010603531 0.191929134 0.125048095 -13 -13 -13 0.01 dme-miR-304-5p 8mer-A1 TGAGATTA 3L 12824572 12824579 + 3L_12824572_12824579_+ 0.625363359 0.625363359 0.625363359 0 CG42588 FBtr0304053|FBtr0301717 12824517|12824517 12824650|12824650 3L + 12824528 12824588 3'utr CG42588 FlyBase G29883.1 TGGAAACACACTGGTAACAGAAAATCTTCTGAACAAGCACCATCTGAGATTATAACTTATT 14 12824570 0.976945955 5 12 75 0.894736842 1.230448921 0 0.214285714 0.421052632 14 2 0 17 3L:12824528-12824588 8 CG42588 FBtr0301717|FBtr0304053 12824517|12824517 12824650|12824650 TGAGATTA 8mer-A1 dme-miR-304-5p 3L + 12824537 12824590 3'utr CG42588 FlyBase G22612.1 ACTGGTAACAGAAAATCTTCTGAACAAGCACCATCTGAGATTATAACTTATTGT 13 12824571 0.9810472 6 12 77 0.941176471 1.204119983 0 0.230769231 0.411764706 13 1 0 16 3L:12824537-12824590 8 10.5 2392 FBgn0260965 649.5 9.203333333 14.18 0.016166282 1.140890982 0.740479549 2 1 1.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 12852253 12852258 + 3L_12852253_12852258_+ 1 1 1 0 Wbp2 FBtr0273240|FBtr0273241|FBtr0332047 12852235|12852235|12852235 12853169|12853169|12853169 3L + 12852232 12852276 stop_codon Wbp2 FlyBase G29892.1 TGTAATTAAAAGCAAACTACTGTACCTCAAATAGCCATCCCGACA 37 12852252 0.654453339 4 37 153 1 1.662757832 0.152173913 0.189189189 0.347826087 37 0 0 46 3L:12852232-12852276 6 Wbp2 FBtr0332047|FBtr0273240|FBtr0273241 12852235|12852235|12852235 12853169|12853169|12853169 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 12852235 12852276 stop_codon Wbp2 FlyBase G22617.1 AATTAAAAGCAAACTACTGTACCTCAAATAGCCATCCCGACA 32 12852252 0.920082361 5 32 131 1 1.72427587 0.150943396 0.5 0.698113208 32 0 0 53 3L:12852235-12852276 6 34.5 2393 FBgn0036318 1204.006667 91.87 139.8366667 0.028654326 0.375530641 0.246716407 1 1 1 0.01 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 12894546 12894553 + 3L_12894546_12894553_+ 0.643565469 0.643565469 0.643565469 0 CG14118 FBtr0075870 12894495 12894758 3L + 12894528 12894564 3'utr CG14118 FlyBase G29896.1 TTTTAAGTGAGTGCAATAAAGACTGAGTGAGTTGTGT 18 12894544 0.872400093 3 17 87 0.947368421 1.255272505 0.736842105 0.055555556 0.105263158 18 1 0 18 3L:12894528-12894564 8 CG14118 FBtr0075870 12894495 12894758 AAGACTGA 8mer-A1 dme-miR-14-3p 3L + 12894529 12894566 3'utr CG14118 FlyBase G22619.1 TTTAAGTGAGTGCAATAAAGACTGAGTGAGTTGTGTGA 14 12894544 0.879132243 2 14 71 1 1.278753601 0.631578947 0.285714286 0.473684211 14 0 0 19 3L:12894529-12894566 8 16 2394 FBgn0036323 1 0.083333333 0.13 16 192 123.0769231 2 2 2 0.01 dme-miR-304-5p 8mer-A1 TGAGATTA 3L 1299857 1299864 + 3L_1299857_1299864_+ 0.625363359 0.625363359 0.625363359 0 scf FBtr0089941|FBtr0089942 1299832|1299832 1300389|1300389 3L + 1299831 1299963 stop_codon scf FlyBase G27015.1 TAGAGTGTCTAGATACCCAGAATCCCTGAGATTAAGATTGATCCTATGAATCTCCCACTTCGCATGCCAAATAACTTGTAATCTTGTCTAGCCCTTAAGACCTTAAGAAAGTGCATTATAAACCGACTCGAAT 587 1299862 0.890049899 29 559 3878 0.949712644 1.820201459 0.096264368 0.160136286 0.291666667 587 26 9 661 3L:1299831-1299963 8 scf FBtr0089941|FBtr0089942 1299832|1299832 1300389|1300389 TGAGATTA 8mer-A1 dme-miR-304-5p 3L + 1299711 1299961 stop_codon scf FlyBase G20453.1 GAGGCCGATGCGGACCACGATGATAAGTTGACAAAGGAGGAAATACTAGACAAGTACGACGTTTTCGTCGGCTCCCAGGCCACCGATTTCGGCGAGGCCTTGGCCCGCCACGATGAGTTCTAGAGTGTCTAGATACCCAGAATCCCTGAGATTAAGATTGATCCTATGAATCTCCCACTTCGCATGCCAAATAACTTGTAATCTTGTCTAGCCCTTAAGACCTTAAGAAAGTGCATTATAAACCGACTCGA 386 1299862 0.979498298 39 361 2483 0.942857143 1.845872874 0.090756303 0.383419689 0.6 386 27 7 561 3L:1299711-1299961 8 269.5 2395 FBgn0025682 1802 152.5933333 234.48 0.149556049 1.766132203 1.149351757 -5 -5 -5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3L 1300222 1300228 + 3L_1300222_1300228_+ 0.823349562 0.823349562 0.823349562 0 scf FBtr0089941|FBtr0089942 1299832|1299832 1300389|1300389 3L + 1300135 1300233 3'utr scf FlyBase G27017.2 AGATACGCCGCCTTTGCCTGTGTAACATATGTATAAACATAAATGATTTTCGCTGTAGCCCGATTTATTTCCAGCTGCGAGAACATTCCAAAGAGAGTG 68 1300220 0.841920804 12 65 265 0.964705882 1.311753861 0.411764706 0.176470588 0.341176471 68 0 3 82 3L:1300135-1300233 7 scf FBtr0089941|FBtr0089942 1299832|1299832 1300389|1300389 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 1300182 1300233 3'utr scf FlyBase G20454.2 TTTCGCTGTAGCCCGATTTATTTCCAGCTGCGAGAACATTCCAAAGAGAGTG 28 1300220 0.809028302 5 27 85 1 1.643452676 0.386363636 0.535714286 0.704545455 28 0 0 44 3L:1300182-1300233 7 34 2396 FBgn0025682 1802 152.5933333 234.48 0.018867925 0.222814452 0.145001706 2 2 2 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 3L 13009226 13009232 + 3L_13009226_13009232_+ 0.823349562 0.823349395 0.823349479 1.41E-07 CG14117 FBtr0306091|FBtr0332074 13009186|13008969 13009450|13009450 3L + 13009209 13009249 3'utr CG14117 FlyBase G29898.1 AATAACCCCAGATTTCGAGACTGATGGCTCAGAACGGATAT 36 13009223 0.616156631 5 36 185 1 1.591064607 0.102564103 0.055555556 0.128205128 36 0 0 39 3L:13009209-13009249 7 CG14117 FBtr0332074|FBtr0306091 13008969|13009186 13009450|13009450 AGACTGA 7mer-A1 dme-miR-14-3p 3L + 13009209 13009290 3'utr CG14117 FlyBase G22622.1 AATAACCCCAGATTTCGAGACTGATGGCTCAGAACGGATATGCGTCAAATTAAACGAGGATGTAGCCTTTAGCTATTTAGTT 38 13009233 0.905760003 8 38 207 1 1.77815125 0.183333333 0.342105263 0.583333333 38 0 0 60 3L:13009209-13009290 7 32 2397 FBgn0036331 82 9.843333333 15.15333333 0.390243902 3.250931256 2.11174659 3 -7 -2 0.01 dme-miR-92b-3p 7mer-m1 TGCAATT 3L 1301189 1301195 - 3L_1301189_1301195_- 0.765586663 0.765586663 0.765586663 0 Rac1 FBtr0331868|FBtr0072730 1300877|1300964 1301767|1301767 3L - 1301177 1301284 3'utr Rac1 FlyBase G33252.1 TGAGCATAAAGCATAGATGTCGCATAGATGTTGATCGAAGGTCCTGCGGAAGGGATCAGGATATTGAGTCAGTAAAGTAAACGTTCCATTGCAATTACACTTACATTA 16 1301198 0.810351232 9 15 81 1 1.278753601 0.263157895 0.1875 0.315789474 16 0 0 19 3L:1301177-1301284 7 Rac1 FBtr0331868|FBtr0072730 1300877|1300964 1301767|1301767 TGCAATT 7mer-m1 dme-miR-92b-3p 3L - 1301122 1301232 3'utr Rac1 FlyBase G25157.1 GGATCAGGATATTGAGTCAGTAAAGTAAACGTTCCATTGCAATTACACTTACATTATTACATACTTGTATTTAGATGTTGTTGGATATCGAAGCGACGGCGCGGGCGAGTA 12 1301190 0.973698504 9 10 69 0.8 0.602059991 0.1 0.5 0.7 12 1 3 16 3L:1301122-1301232 7 5 2398 FBgn0010333 1433.84 96.69333333 148.01 0.003487139 0.051709873 0.033781501 3 -5 -1 0.01 dme-miR-282-5p 6mer2-7 GAGGCT 3L 13020073 13020078 - 3L_13020073_13020078_- 1 1 1 0 AdenoK FBtr0075895|FBtr0075896|FBtr0346531 13019980|13019980|13019713 13020289|13020289|13020289 3L - 13020034 13020097 3'utr AdenoK FlyBase G36605.1 ATGAACAAATAGAGAGAGTGAGGCTTGTGTCTTATAGATAGAGCAATATTCGAATTTAAATTGA 83 13020079 0.974881337 5 81 503 0.97752809 1.939519253 0.146067416 0.072289157 0.134831461 83 2 0 87 3L:13020034-13020097 6 AdenoK FBtr0075896|FBtr0346531|FBtr0075895 13019980|13019713|13019980 13020289|13020289|13020289 GAGGCT 6mer2-7 dme-miR-282-5p 3L - 13020035 13020101 3'utr AdenoK FlyBase G27639.1 TGACATGAACAAATAGAGAGAGTGAGGCTTGTGTCTTATAGATAGAGCAATATTCGAATTTAAATTG 41 13020079 0.975020172 6 40 251 0.983333333 1.770852012 0.183333333 0.317073171 0.533333333 41 1 0 59 3L:13020035-13020101 6 60 2399 FBgn0036337 473.9933333 36.92 56.63666667 0.126584059 1.625135428 1.05938438 1 1 1 0.01 dme-miR-999-3p 7mer-A1 GTTAACA 3L 13020168 13020174 - 3L_13020168_13020174_- 0.823349562 0.823349562 0.823349562 0 AdenoK FBtr0075895|FBtr0075896|FBtr0346531 13019980|13019980|13019713 13020289|13020289|13020289 3L - 13020160 13020202 3'utr AdenoK FlyBase G36606.1 AAGTAAATGAGAGTGACTAAAAGATTTTGTTAACACTGATAAT 27 13020175 0.662619382 6 26 215 0.971428571 1.531478917 0.257142857 0.222222222 0.4 27 1 0 34 3L:13020160-13020202 7 AdenoK FBtr0075896|FBtr0346531|FBtr0075895 13019980|13019713|13019980 13020289|13020289|13020289 GTTAACA 7mer-A1 dme-miR-999-3p 3L - 13020164 13020231 3'utr AdenoK FlyBase G27640.1 AAGCGCAGCAAGATTTGCAATTGTTAATTAAGTAAATGAGAGTGACTAAAAGATTTTGTTAACACTGA 19 13020175 0.983059798 6 18 153 0.941176471 1.505149978 0.117647059 0.631578947 0.794117647 19 2 0 32 3L:13020164-13020231 7 20 2400 FBgn0036337 473.9933333 36.92 56.63666667 0.042194686 0.541711809 0.353128127 1 1 1 0.01 dme-miR-980-3p 6mer2-7 GCAGCT 3L 1311764 1311769 - 3L_1311764_1311769_- 1 1 1 0 CG9186 FBtr0072728|FBtr0072727 1311717|1311717 1311929|1311929 3L - 1311720 1311900 3'utr CG9186 FlyBase G33267.1 AGCCCTGTCCATTACCTAATCCATCCATGCCAATAGACTTGGGAATCCGGATTACGGTTGAACAGCAAACCAATAGCAATTACTCCACTGCCTTTGTGTGGCAATTAGTTCGTTTTTATTAGTATCTTTTTGCAGCTCTCGAAGACAACTCTAAATATAGTCAAAAGTGATTTAACACGGT 78 1311771 0.883379304 21 78 564 1 2.037426498 0.036697248 0.307692308 0.504587156 78 0 0 109 3L:1311720-1311900 6 CG9186 FBtr0072728|FBtr0072727 1311717|1311717 1311929|1311929 GCAGCT 6mer2-7 dme-miR-980-3p 3L - 1311723 1311794 3'utr CG9186 FlyBase G25170.1 AGTTCGTTTTTATTAGTATCTTTTTGCAGCTCTCGAAGACAACTCTAAATATAGTCAAAAGTGATTTAACAC 26 1311771 0.789320498 5 26 207 1 1.591064607 0.051282051 0.384615385 0.58974359 26 0 0 39 3L:1311723-1311794 6 22 2401 FBgn0035206 326.0766667 28.00666667 42.93333333 0.067468796 0.785527255 0.51242236 2 2 2 0.01 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3L 1318252 1318257 + 3L_1318252_1318257_+ 1 1 1 0 CG9153 FBtr0310555|FBtr0072671|FBtr0072670 1318000|1318000|1318000 1318330|1318330|1318330 3L + 1318160 1318278 3'utr CG9153 FlyBase G27049.1 AGTACAATGTCGTGTTATAGCTTTAAACTCTAGACTAGTTATTAATATCGCATTGTTATGGAGAGAAAGGAATTCAAGGAGGTAAATAAGGTTGGTGCATCAGTCTGAGGACAACAACA 91 1318259 0.823387251 18 77 567 0.85046729 1.959041392 0.196261682 0.164835165 0.289719626 91 16 0 91 3L:1318160-1318278 6 CG9153 FBtr0072670|FBtr0310555|FBtr0072671 1318000|1318000|1318000 1318330|1318330|1318330 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3L + 1318152 1318278 3'utr CG9153 FlyBase G20475.1 AATCAGCAAGTACAATGTCGTGTTATAGCTTTAAACTCTAGACTAGTTATTAATATCGCATTGTTATGGAGAGAAAGGAATTCAAGGAGGTAAATAAGGTTGGTGCATCAGTCTGAGGACAACAACA 51 1318258 0.975664576 16 46 295 0.891566265 1.86923172 0.168674699 0.490196078 0.686746988 51 9 0 74 3L:1318152-1318278 6 43 2402 FBgn0035207 1089.59 34.05 51.71333333 0.039464386 1.262848752 0.831507026 -7 -6 -6.5 0.01 dme-miR-988-3p 7mer-m8 ACAAGGG 3L 13278114 13278120 + 3L_13278114_13278120_+ 0.671796207 0.669726756 0.670761482 0.001463287 caps FBtr0075832|FBtr0075833|FBtr0305480 13277310|13277310|13278030 13279642|13279642|13279642 3L + 13278090 13278163 stop_codon caps FlyBase G29944.1 CGGATATCGAGCTGCATTACTTCTACAAGGGTTAAAGAGGAAACTTGAAAAGCAAGGGAATCGATCTAATTTAA 21 13278121 0.93786401 8 18 105 0.888888889 1.380211242 0.148148148 0.285714286 0.444444444 21 3 0 24 3L:13278090-13278163 7 caps FBtr0075832|FBtr0075833|FBtr0305480 13277310|13277310|13278030 13279642|13279642|13279642 ACAAGGG 7mer-m8 dme-miR-988-3p 3L + 13278097 13278162 stop_codon caps FlyBase G22664.1 CGAGCTGCATTACTTCTACAAGGGTTAAAGAGGAAACTTGAAAAGCAAGGGAATCGATCTAATTTA 12 13278135 0.962094551 4 9 49 0.722222222 1.113943352 0.055555556 0.5 0.666666667 12 5 0 13 3L:13278097-13278162 7 9 2403 FBgn0023095 209.6666667 5.27 8.083333333 0.042925278 1.707779886 1.113402062 -7 -21 -14 0.01 dme-miR-31a-5p 6mer3-8 TCTTGC 3L 13278410 13278415 + 3L_13278410_13278415_+ 1 1 1 0 caps FBtr0075832|FBtr0075833|FBtr0305480|FBtr0346864 13277310|13277310|13278030|13278123 13279642|13279642|13279642|13279642 3L + 13278376 13278451 3'utr caps FlyBase G29945.1 AAGCGCAGGAAAATCGCAGGTGTATATAAGAAAATCTTGCGCACAATTTGGCGGACGGTGTGGATTGGGCAAAAAA 47 13278422 0.971047912 8 44 254 0.952380952 1.77815125 0.333333333 0.212765957 0.412698413 47 3 0 60 3L:13278376-13278451 6 caps FBtr0075832|FBtr0075833|FBtr0305480|FBtr0346864 13277310|13277310|13278030|13278123 13279642|13279642|13279642|13279642 TCTTGC 6mer3-8 dme-miR-31a-5p 3L + 13278410 13278449 3'utr caps FlyBase G22665.1 TCTTGCGCACAATTTGGCGGACGGTGTGGATTGGGCAAAA 30 13278423 0.869759777 6 29 157 0.97826087 1.653212514 0.369565217 0.366666667 0.586956522 30 1 0 45 3L:13278410-13278449 5 6.5 2404 FBgn0023095 209.6666667 5.27 8.083333333 0.03100159 1.233396584 0.804123711 -12 -13 -12.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 3L 13278505 13278510 + 3L_13278505_13278510_+ 1 1 1 0 caps FBtr0075832|FBtr0075833|FBtr0305480|FBtr0346864 13277310|13277310|13278030|13278123 13279642|13279642|13279642|13279642 3L + 13278465 13278553 3'utr caps FlyBase G29946.1 ATTGACCATCCTGCTGATCGGCCATTTAATTTGCATACAGTGATCTTAATATTTAGGTTATGCTTAAAAGCAGTTCAATTATTGTAAAT 106 13278510 0.991625236 15 92 1002 0.893129771 1.46612587 0.022900763 0.20754717 0.358778626 106 11 3 117 3L:13278465-13278553 6 caps FBtr0075832|FBtr0075833|FBtr0305480|FBtr0346864 13277310|13277310|13278030|13278123 13279642|13279642|13279642|13279642 TGATCT 6mer3-8 dme-bantam-3p 3L + 13278465 13278529 3'utr caps FlyBase G22666.1 ATTGACCATCCTGCTGATCGGCCATTTAATTTGCATACAGTGATCTTAATATTTAGGTTATGCTT 59 13278509 0.69590373 11 53 502 0.896551724 1.591064607 0.034482759 0.322033898 0.540229885 59 8 1 78 3L:13278465-13278529 6 72 2405 FBgn0023095 209.6666667 5.27 8.083333333 0.343402226 13.66223909 8.907216495 -5 -4 -4.5 0.01 dme-bantam-3p 6mer2-7 GATCTC 3L 1333330 1333335 - 3L_1333330_1333335_- 1 0.999999895 0.999999947 7.07E-08 CG2211 FBtr0331866|FBtr0072723 1333237|1333237 1333416|1333416 3L - 1333287 1333388 3'utr CG2211 FlyBase G33271.1 ATTCAAACAGCCATGTTAGTCCAAACTTTCATATGGTATAAACTCCCTATTAAGATCTCGTTAAAACCACTGAAGACTTGAAATACGTGTAGTGCACTCTAA 77 1333328 0.968417021 14 69 557 0.902173913 1.220108088 0.141304348 0.155844156 0.293478261 77 5 4 83 3L:1333287-1333388 6 CG2211 FBtr0331866|FBtr0072723 1333237|1333237 1333416|1333416 GATCTC 6mer2-7 dme-bantam-3p 3L - 1333294 1333365 3'utr CG2211 FlyBase G25174.2 AACTTTCATATGGTATAAACTCCCTATTAAGATCTCGTTAAAACCACTGAAGACTTGAAATACGTGTAGTGC 62 1333328 0.924516305 11 62 379 1 1.954242509 0.055555556 0.322580645 0.533333333 62 0 0 90 3L:1333294-1333365 6 53 2406 FBgn0035211 37.72 2.756666667 4.2 1.405090138 19.2261185 12.61904762 -7 -7 -7 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 13386376 13386381 - 3L_13386376_13386381_- 1 1 1 0 CG10171 FBtr0075865|FBtr0075865|FBtr0075865|FBtr0075864|FBtr0075864|FBtr0075864 13385944|13385944|13385944|13386092|13386092|13386092 13386714|13386714|13386714|13386714|13386714|13386714 3L - 13386349 13386396 3'utr CG10171 FlyBase G36613.1 ATGACGTTGTTGTTACTGTGACTGTTCACCTCCATTTTGTGTATTAAC 16 13386372 0.98502915 6 16 130 1 1.301029996 0.5 0.1875 0.35 16 0 0 20 3L:13386349-13386396 6 CG10171 FBtr0075864|FBtr0075864|FBtr0075864|FBtr0075865|FBtr0075865|FBtr0075865 13386092|13386092|13386092|13385944|13385944|13385944 13386714|13386714|13386714|13386714|13386714|13386714 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 13386360 13386402 3'utr CG10171 FlyBase G27645.1 CGGATTATGACGTTGTTGTTACTGTGACTGTTCACCTCCATTT 17 13386373 0.700992705 6 16 151 1 1.447158031 0.428571429 0.411764706 0.642857143 17 0 0 28 3L:13386360-13386402 6 15 2407 FBgn0036353 70.39 4.823333333 7.333333333 0.213098451 3.109882516 2.045454545 -9 -8 -8.5 0.01 dme-miR-12-5p 6mer2-7 ATACTC 3L 13388457 13388462 - 3L_13388457_13388462_- 0.999999444 1 0.999999722 4.24E-07 Poc1 FBtr0075863 13388297 13388629 3L - 13388441 13388512 stop_codon Poc1 FlyBase G36617.1 AGCAAACTATTGGACTCGATCGATGAGCGTGTGCGACGATTGGAGGGCATATACTCTTTATAGCCTTCTAAG 18 13388461 0.864732519 7 17 113 0.954545455 1.322219295 0.181818182 0.166666667 0.318181818 18 1 0 21 3L:13388441-13388512 6 Poc1 FBtr0075863 13388297 13388629 ATACTC 6mer2-7 dme-miR-12-5p 3L - 13388443 13388518 stop_codon Poc1 FlyBase G27648.1 GAGATCAGCAAACTATTGGACTCGATCGATGAGCGTGTGCGACGATTGGAGGGCATATACTCTTTATAGCCTTCTA 18 13388460 0.767730182 6 18 113 1 1.361727836 0.260869565 0.277777778 0.434782609 18 0 0 23 3L:13388443-13388518 6 7.5 2408 FBgn0036354 422.6533333 31.14666667 47.30333333 0.017745039 0.240796233 0.158551194 -1 -2 -1.5 0.01 dme-miR-2a-2-5p 6mer2-7 GATGAG 3L 13388486 13388491 - 3L_13388486_13388491_- 0.999999424 1 0.999999712 4.24E-07 Poc1 FBtr0075863 13388297 13388629 3L - 13388441 13388512 stop_codon Poc1 FlyBase G36617.1 AGCAAACTATTGGACTCGATCGATGAGCGTGTGCGACGATTGGAGGGCATATACTCTTTATAGCCTTCTAAG 18 13388502 0.864732519 7 17 113 0.954545455 1.322219295 0.181818182 0.166666667 0.318181818 18 1 0 21 3L:13388441-13388512 6 Poc1 FBtr0075863 13388297 13388629 GATGAG 6mer2-7 dme-miR-2a-2-5p 3L - 13388443 13388518 stop_codon Poc1 FlyBase G27648.1 GAGATCAGCAAACTATTGGACTCGATCGATGAGCGTGTGCGACGATTGGAGGGCATATACTCTTTATAGCCTTCTA 18 13388502 0.767730182 6 18 113 1 1.361727836 0.260869565 0.277777778 0.434782609 18 0 0 23 3L:13388443-13388518 6 7.5 2409 FBgn0036354 422.6533333 31.14666667 47.30333333 0.017745039 0.240796233 0.158551194 11 11 11 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 3L 1339523 1339528 - 3L_1339523_1339528_- 1 1 1 0 CG2199 FBtr0331865|FBtr0072722|FBtr0072721 1339458|1339458|1339458 1339821|1339821|1339821 3L - 1339468 1339598 3'utr CG2199 FlyBase G33274.1 AATTTGTATATTAAGACTTTATTATAACCGCATTGGTTACACCACTTGTACTCACCAAGAGTATATAAATTAGCTTGAATGTAATAAACATATTTGTACTGAGCGATGAACTGTTAATAAAAAATGGCAAA 72 1339529 0.78691201 14 71 509 1 1.973127854 0.106382979 0.180555556 0.372340426 72 0 0 94 3L:1339468-1339598 6 CG2199 FBtr0072721|FBtr0331865|FBtr0072722 1339458|1339458|1339458 1339821|1339821|1339821 TAGCTT 6mer3-8 dme-miR-79-3p 3L - 1339469 1339563 3'utr CG2199 FlyBase G25178.1 GTTACACCACTTGTACTCACCAAGAGTATATAAATTAGCTTGAATGTAATAAACATATTTGTACTGAGCGATGAACTGTTAATAAAAAATGGCAA 51 1339529 0.881639837 9 50 342 0.986666667 1.86923172 0.133333333 0.352941176 0.56 51 1 0 74 3L:1339469-1339563 6 39 2410 FBgn0035213 1503.256667 70.66666667 108.9133333 0.025943673 0.551886792 0.358082879 1 1 1 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 3L 1343903 1343909 - 3L_1343903_1343909_- 0.823349562 0.823349562 0.823349562 0 Ptp61F FBtr0072719|FBtr0310161 1342717|1342717 1344327|1344327 3L - 1343886 1343951 3'utr Ptp61F FlyBase G33294.1 AAAATCGGGTAGAAATCACGTCAAATGTAGATTTTGCGCAATAGACTGACATTTTAGATCAAATTT 59 1343910 0.982685905 9 58 433 0.986486486 1.562292864 0.135135135 0.203389831 0.364864865 59 0 1 73 3L:1343886-1343951 7 Ptp61F FBtr0310161|FBtr0072719 1342717|1342717 1344327|1344327 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 1343886 1343929 3'utr Ptp61F FlyBase G25190.1 AAATGTAGATTTTGCGCAATAGACTGACATTTTAGATCAAATTT 34 1343910 0.923139298 3 31 223 0.88 1.342422681 0.22 0.323529412 0.54 34 5 1 44 3L:1343886-1343929 7 45.5 2411 FBgn0267487 1392.83 58.80666667 89.87333333 0.032667303 0.7737218 0.506268081 1 1 1 0.01 dme-miR-1007-3p 6mer3-8 TGAGCT 3L 1344063 1344068 - 3L_1344063_1344068_- 1 1 1 0 Ptp61F FBtr0072719|FBtr0310161|FBtr0072718 1342717|1342717|1343981 1344327|1344327|1344327 3L - 1344034 1344092 3'utr Ptp61F FlyBase G33295.1 ACGAATTGCGGATGGCGGATTGATTGAGCTGAACGAACGATACAAGATGCATAAATATT 9 1344069 0.961517269 4 9 48 1 1.146128036 0.142857143 0.333333333 0.571428571 9 0 0 14 3L:1344034-1344092 6 Ptp61F FBtr0310161|FBtr0072718|FBtr0072719 1342717|1343981|1342717 1344327|1344327|1344327 TGAGCT 6mer3-8 dme-miR-1007-3p 3L - 1344030 1344081 3'utr Ptp61F FlyBase G25191.1 ATGGCGGATTGATTGAGCTGAACGAACGATACAAGATGCATAAATATTAGGG 6 1344069 0.961935594 4 5 26 0.857142857 0.77815125 0 0.166666667 0.285714286 6 1 0 6 3L:1344030-1344081 6 5.5 2412 FBgn0267487 1392.83 58.80666667 89.87333333 0.003948795 0.093526811 0.061197241 1 1 1 0.01 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 13483952 13483958 - 3L_13483952_13483958_- 0.817398707 0.823288374 0.82034354 0.004164647 Abp1 FBtr0075819 13483531 13484013 3L - 13483912 13483975 3'utr Abp1 FlyBase G36640.1 TAAATATCTACACCAATGCAGCTAGCAACTATATTTTGGATCCGGACTATAGCTACTTAAACAC 81 13483959 0.925631323 11 71 322 0.916666667 1.643452676 0.020833333 0.1875 0.322916667 80 7 1 88 3L:13483912-13483975 7 Abp1 FBtr0075819 13483531 13484013 GCAGCTA 7mer-A1 dme-miR-980-3p 3L - 13483936 13483990 3'utr Abp1 FlyBase G27663.2 GGGACGCCCTTTTGCTAAATATCTACACCAATGCAGCTAGCAACTATATTTTGGA 48 13483959 0.948217751 5 42 176 0.913580247 1.170261715 0.012345679 0.5 0.703703704 48 3 4 74 3L:13483936-13483990 7 53 2413 FBgn0036372 618.6666667 30.00333333 45.8 0.085668103 1.766470392 1.15720524 1 1 1 0.01 dme-miR-283-5p 8mer-A1 TGATATTA 3L 13509895 13509902 + 3L_13509895_13509902_+ 0.592192292 0.592192292 0.592192292 0 Spt20 FBtr0340705|FBtr0304904|FBtr0075812 13509797|13508879|13509797 13510695|13510695|13511541 3L + 13509871 13509914 3'utr Spt20 FlyBase G30001.1 GAAGGCTACGCGTTGTGTATTGCTTGATATTATAGTTTATGGTT 8 13509894 0.98605216 4 8 95 1 1 0 0.25 0.4 8 0 0 10 3L:13509871-13509914 8 Spt20 FBtr0075812|FBtr0304904|FBtr0340705 13509797|13508879|13509797 13511541|13510695|13510695 TGATATTA 8mer-A1 dme-miR-283-5p 3L + 13509837 13509912 3'utr Spt20 FlyBase G22707.1 CGACTGAGAGATGAAGCTATAGAGCGAACAAGTAGAAGGCTACGCGTTGTGTATTGCTTGATATTATAGTTTATGG 16 13509893 0.942297423 6 12 110 0.761904762 0.903089987 0.380952381 0.3125 0.476190476 16 4 1 16 3L:13509837-13509912 8 8 2414 FBgn0036374 444.0733333 7.2 11.05666667 0.018015043 1.111111111 0.723545372 1 2 1.5 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT 3L 13510012 13510018 + 3L_13510012_13510018_+ 0.658999527 0.658999527 0.658999527 0 Spt20 FBtr0340705|FBtr0304904|FBtr0075812 13509797|13508879|13509797 13510695|13510695|13511541 3L + 13509944 13510036 3'utr Spt20 FlyBase G30002.1 TGTATACCCATATAACTATATATGTTTTGATGTGTAATCGTAAGTGTAAATTGCATGGGCAACAGCATGGCAGCTCATAGTTGTGCAACCTAG 292 13510011 0.982357188 8 289 1074 0.991689751 2.553883027 0.318559557 0.178082192 0.335180055 292 3 0 358 3L:13509944-13510036 7 Spt20 FBtr0075812|FBtr0304904|FBtr0340705 13509797|13508879|13509797 13511541|13510695|13510695 GGCAGCT 7mer-m8 dme-miR-980-3p 3L + 13509990 13510036 3'utr Spt20 FlyBase G22708.1 TAAATTGCATGGGCAACAGCATGGCAGCTCATAGTTGTGCAACCTAG 185 13510011 0.973260255 5 181 622 0.982758621 2.45484486 0.437931034 0.358695652 0.593103448 184 5 0 285 3L:13509990-13510036 7 235 2415 FBgn0036374 444.0733333 7.2 11.05666667 0.529191875 32.63888889 21.25414531 1 1 1 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3L 13511094 13511100 + 3L_13511094_13511100_+ 0.443131018 0.443131018 0.443131018 0 Spt20 FBtr0075812 13509797 13511541 3L + 13511082 13511107 3'utr Spt20 FlyBase G30005.1 TTAATTAATAAATGTGATTTAAGATG 9 13511100 0.780936964 2 9 63 1 1.079181246 0.583333333 0.222222222 0.416666667 9 0 0 12 3L:13511082-13511107 7 Spt20 FBtr0075812 13509797 13511541 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 13511072 13511110 3'utr Spt20 FlyBase G22709.1 AATGTTAATATTAATTAATAAATGTGATTTAAGATGAAT 8 13511100 0.981519195 3 8 67 1 1.041392685 0.454545455 0.375 0.545454545 8 0 0 11 3L:13511072-13511110 7 8.5 2416 FBgn0036374 444.0733333 7.2 11.05666667 0.019140983 1.180555556 0.768766958 -6 -6 -6 0.01 dme-miR-34-5p 7mer-A1 ACTGCCA 3L 13515854 13515860 + 3L_13515854_13515860_+ 0.823349562 0.823349562 0.823349562 0 Liprin-beta FBtr0075813|FBtr0330342|FBtr0075814 13515759|13515759|13515759 13516276|13516276|13516276 3L + 13515770 13515875 3'utr Liprin-beta FlyBase G30022.1 CGAAAGGAGCACAAATCGATTGAAAGCAAATATGTTTTTTAGTTGTAAGCCCAAAACCTGGCCAAGGATCCCCAAACTGAATGAACTGCCACCTGAACCAATTATG 59 13515851 0.973035859 16 53 319 0.918918919 1.832508913 0.324324324 0.186440678 0.351351351 59 6 0 68 3L:13515770-13515875 7 Liprin-beta FBtr0330342|FBtr0075814|FBtr0075813 13515759|13515759|13515759 13516276|13516276|13516276 ACTGCCA 7mer-A1 dme-miR-34-5p 3L + 13515771 13515868 3'utr Liprin-beta FlyBase G22720.1 GAAAGGAGCACAAATCGATTGAAAGCAAATATGTTTTTTAGTTGTAAGCCCAAAACCTGGCCAAGGATCCCCAAACTGAATGAACTGCCACCTGAACC 43 13515851 0.975870382 9 38 237 0.892307692 1.763427994 0.307692308 0.325581395 0.553846154 43 7 0 58 3L:13515771-13515868 7 27.5 2417 FBgn0036376 801.8733333 34.78666667 53.21666667 0.034294693 0.790532771 0.516755402 3 3 3 0.01 dme-miR-980-5p 8mer-A1 GAAAAACA 3L 1352108 1352115 + 3L_1352108_1352115_+ 0.639886926 0.639886926 0.639886926 0 CG9166 FBtr0072680 1352030 1352853 3L + 1352079 1352110 3'utr CG9166 FlyBase G27073.1 ACGTGCGAGATCACTTGCAGTGTGATTTGGAA 19 1352105 0.781300346 2 18 126 0.962962963 1.414973348 0.222222222 0.210526316 0.444444444 19 1 0 26 3L:1352079-1352110 3 CG9166 FBtr0072680 1352030 1352853 GAAAAACA 8mer-A1 dme-miR-980-5p 3L + 1352080 1352110 3'utr CG9166 FlyBase G20493.1 CGTGCGAGATCACTTGCAGTGTGATTTGGAA 11 1352106 0.791903675 3 11 71 1 1.230448921 0.411764706 0.454545455 0.647058824 11 0 0 17 3L:1352080-1352110 3 13.5 2418 FBgn0029514 63.66666667 7.47 11.33666667 0.212041885 1.807228916 1.190826228 3 2 2.5 0.01 dme-miR-283-5p 8mer-m1 TGATATTT 3L 13907432 13907439 - 3L_13907432_13907439_- 0.555593841 0.555593841 0.555593841 0 Rgl FBtr0075793|FBtr0330186|FBtr0075794|FBtr0075796|FBtr0075795 13906895|13906895|13906895|13906895|13906895 13907823|13907766|13907823|13907823|13907823 3L - 13907423 13907471 3'utr Rgl FlyBase G36656.1 ATATTATACAGAGACTCTACTGGAATATTTGCTGATATTTACAAACACA 17 13907443 0.73279272 5 16 145 0.952380952 1.301029996 0.19047619 0.235294118 0.380952381 17 1 0 20 3L:13907423-13907471 8 Rgl FBtr0075795|FBtr0075794|FBtr0075796|FBtr0075793|FBtr0330186 13906895|13906895|13906895|13906895|13906895 13907823|13907823|13907823|13907823|13907766 TGATATTT 8mer-m1 dme-miR-283-5p 3L - 13907404 13907463 3'utr Rgl FlyBase G27670.1 CAGAGACTCTACTGGAATATTTGCTGATATTTACAAACACACATATACATTAAGTATATT 16 13907443 0.989560777 5 15 145 0.909090909 1.301029996 0.090909091 0.3125 0.5 16 2 0 20 3L:13907404-13907463 8 13.5 2419 FBgn0026376 1692.026667 44.63666667 68.24666667 0.007978598 0.302441939 0.197811859 4 4 4 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 3L 13907715 13907720 - 3L_13907715_13907720_- 0.999999798 1 0.999999899 1.41E-07 Rgl FBtr0075793|FBtr0330186|FBtr0075794|FBtr0075796|FBtr0075795 13906895|13906895|13906895|13906895|13906895 13907823|13907766|13907823|13907823|13907823 3L - 13907670 13907780 stop_codon Rgl FlyBase G36657.1 AGGGCGAGGAGTGAGGGTTAAGGATTATACATTGGGGGGGAAATTGTAAATAGCTAGAGCTTGACTCGCCCATGACAAAACTGGATAAACCAATTTCTATTTAGGTTCGTA 15 13907718 0.962173523 10 15 80 1 1.204119983 0 0.066666667 0.125 15 0 0 16 3L:13907670-13907780 6 Rgl FBtr0075795|FBtr0075794|FBtr0075796|FBtr0075793|FBtr0330186 13906895|13906895|13906895|13906895|13906895 13907823|13907823|13907823|13907823|13907766 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 13907657 13907732 3'utr Rgl FlyBase G27671.1 AATAGCTAGAGCTTGACTCGCCCATGACAAAACTGGATAAACCAATTTCTATTTAGGTTCGTAACTCGTTTAAGTT 13 13907719 0.985001649 7 10 87 0.6875 1.041392685 0 0.230769231 0.375 13 5 0 11 3L:13907657-13907732 6 8 2420 FBgn0026376 1692.026667 44.63666667 68.24666667 0.004728058 0.179224853 0.117221842 -2 -1 -1.5 0.01 dme-miR-11-3p 8mer-m1 CTGTGATG 3L 13934344 13934351 + 3L_13934344_13934351_+ 0.462274223 0.462274223 0.462274223 0 Gl FBtr0075756 13934192 13934656 3L + 13934314 13934361 3'utr Gl FlyBase G30055.1 AATAACACAGCTCCTCAAGACTCCCTGCTCCTGTGATGTGACCTAAAC 102 13934341 0.696635919 10 99 772 0.956521739 1.740362689 0.113043478 0.117647059 0.217391304 102 4 1 110 3L:13934314-13934361 8 Gl FBtr0075756 13934192 13934656 CTGTGATG 8mer-m1 dme-miR-11-3p 3L + 13934316 13934361 3'utr Gl FlyBase G22738.1 TAACACAGCTCCTCAAGACTCCCTGCTCCTGTGATGTGACCTAAAC 51 13934342 0.670338775 6 46 368 0.921052632 1.367976785 0.118421053 0.352941176 0.565789474 51 4 2 70 3L:13934316-13934361 8 75 2421 FBgn0001108 959.94 25.44 38.93 0.078129883 2.948113208 1.926534806 3 2 2.5 0.01 dme-miR-277-3p 8mer-A1 TGCATTTA 3L 13971881 13971888 + 3L_13971881_13971888_+ 0.625364269 0.625364269 0.625364269 0 ssp2 FBtr0075759|FBtr0346645 13971662|13971662 13972006|13973067 3L + 13971864 13971949 3'utr ssp2 FlyBase G30076.1 AATATTACGACAAATTGTGCATTTAGTTGAACGATACATAAATAGAGAACTTGGCGACTTGTAAAACAATTACGCACTCCCAGAAC 48 13971879 0.965324849 10 45 279 0.943396226 1.22184875 0.113207547 0.104166667 0.188679245 48 1 2 50 3L:13971864-13971949 8 ssp2 FBtr0075759|FBtr0346645 13971662|13971662 13972006|13973067 TGCATTTA 8mer-A1 dme-miR-277-3p 3L + 13971870 13971892 3'utr ssp2 FlyBase G22750.1 ACGACAAATTGTGCATTTAGTTG 6 13971879 0.802077787 4 6 42 1 0.903089987 0.75 0.333333333 0.5 6 0 0 8 3L:13971870-13971892 8 10 2422 FBgn0036389 1101.49 30.04333333 45.97333333 0.009078612 0.332852546 0.217517401 2 2 2 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 13972246 13972251 + 3L_13972246_13972251_+ 1 1 1 0 ssp2 FBtr0346645 13971662 13973067 3L + 13972181 13972278 3'utr ssp2 FlyBase G30078.1 TAACGAATATACAATAAGATCCTGCTCAGTGGCCACTAAACCACAAAAAAAAAGGAACGTATAAAACCAAACTGAAATTGATAGTAACTGATAAGAGT 26 13972256 0.971456671 10 21 124 0.838709677 1.414973348 0.193548387 0.115384615 0.258064516 26 5 0 26 3L:13972181-13972278 6 ssp2 FBtr0346645 13971662 13973067 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 13972232 13972285 3'utr ssp2 FlyBase G22754.1 AAGGAACGTATAAAACCAAACTGAAATTGATAGTAACTGATAAGAGTATTGAGA 11 13972260 0.962646606 4 9 54 0.952380952 1.301029996 0.476190476 0.636363636 0.80952381 11 1 0 20 3L:13972232-13972285 6 8.5 2423 FBgn0036389 1101.49 30.04333333 45.97333333 0.00771682 0.282924664 0.184889791 -10 -14 -12 0.01 dme-miR-980-5p 7mer-A1 AAAAACA 3L 13997983 13997989 + 3L_13997983_13997989_+ 0.782911824 0.782911824 0.782911824 0 CG17361 FBtr0075767 13997837 13998055 3L + 13997957 13998041 3'utr CG17361 FlyBase G30098.1 TGAAAGTACATATGGAGTGTAGTTTTAAAAACAATTTCATGTTCTCATATTGACAATAAGATAATAAAGAAATGATAATCGGATC 46 13997995 0.990520245 13 41 413 0.883333333 1.72427587 0.3 0.217391304 0.4 46 7 0 53 3L:13997957-13998041 7 CG17361 FBtr0075767 13997837 13998055 AAAAACA 7mer-A1 dme-miR-980-5p 3L + 13997915 13998019 3'utr CG17361 FlyBase G22765.1 TTCGATATATTTTTAAAGTAGAAACAAGTTAGCGACTAATAATGAAAGTACATATGGAGTGTAGTTTTAAAAACAATTTCATGTTCTCATATTGACAATAAGATA 38 13997995 0.96893913 14 34 345 0.921568627 1.371067862 0.235294118 0.289473684 0.470588235 38 3 1 47 3L:13997915-13998019 7 31 2424 FBgn0036395 38.90333333 5.8 9.033333333 0.796846885 5.344827586 3.431734317 -12 -12 -12 0.01 dme-miR-965-3p 7mer-m8 TACGCTT 3L 13999609 13999615 - 3L_13999609_13999615_- 0.620204855 0.620204855 0.620204855 0 CG8783 FBtr0333025|FBtr0075786|FBtr0075785 13999378|13999378|13999378 13999734|13999734|13999734 3L - 13999592 13999638 3'utr CG8783 FlyBase G36691.1 AAAGTTTGCGAAGCAAATCAATTTACGCTTGTAGACTACATATTTTG 142 13999616 0.758056456 6 142 1141 1 2.201397124 0.213836478 0.105633803 0.201257862 142 0 0 159 3L:13999592-13999638 7 CG8783 FBtr0075786|FBtr0075785|FBtr0333025 13999378|13999378|13999378 13999734|13999734|13999734 TACGCTT 7mer-m8 dme-miR-965-3p 3L - 13999595 13999639 3'utr CG8783 FlyBase G27698.1 TAAAGTTTGCGAAGCAAATCAATTTACGCTTGTAGACTACATATT 82 13999616 0.75354898 5 81 636 0.992248062 2.10720997 0.317829457 0.390243902 0.612403101 82 1 0 128 3L:13999595-13999639 7 112 2425 FBgn0036397 101 5.286666667 8.043333333 1.108910891 21.18537201 13.92457522 1 1 1 0.01 dme-miR-184-5p 6mer3-8 TGATAA 3L 14018034 14018039 + 3L_14018034_14018039_+ 1 1 1 0 upSET FBtr0075768|FBtr0333050 14017876|14017876 14020148|14020148 3L + 14017973 14018048 3'utr upSET FlyBase G30151.1 AAAGTAATACAGCTTCATACAAAGGCCGCTTTATTGCAGGTTGATTCAAATTTTATGTATCTGATAATAGCTAACC 16 14018028 0.990966598 5 14 146 0.869565217 1.301029996 0.173913043 0.25 0.47826087 16 3 0 20 3L:14017973-14018048 6 upSET FBtr0333050|FBtr0075768 14017876|14017876 14020148|14020148 TGATAA 6mer3-8 dme-miR-184-5p 3L + 14018007 14018055 3'utr upSET FlyBase G22801.1 TGCAGGTTGATTCAAATTTTATGTATCTGATAATAGCTAACCGGTACCA 7 14018028 0.965348333 4 7 75 1 1 0 0.285714286 0.5 7 0 0 10 3L:14018007-14018055 6 9.5 2426 FBgn0036398 2404.643333 22.86666667 35.16333333 0.00395069 0.415451895 0.270167788 6 6 6 0.01 dme-miR-1002-5p 7mer-m8 CTACTTA 3L 14018334 14018340 + 3L_14018334_14018340_+ 0.352016993 0.812993329 0.582505161 0.325959468 upSET FBtr0075768|FBtr0333050 14017876|14017876 14020148|14020148 3L + 14018309 14018421 3'utr upSET FlyBase G30154.1 TGTCACAGCAATCAAACCGCTTAACCTACTTATAAACAAGGAACCTACAATATATATATATGCACATGTATATGCTAGACACCTTTAAATAGAGCCTATGTAGCGCGATATAA 25 14018338 0.888485288 13 25 135 1 1.51851394 0.090909091 0.16 0.363636364 25 0 0 33 3L:14018309-14018421 7 upSET FBtr0333050|FBtr0075768 14017876|14017876 14020148|14020148 CTACTTA 7mer-A1 dme-miR-968-5p 3L + 14018308 14018345 3'utr upSET FlyBase G22803.1 ATGTCACAGCAATCAAACCGCTTAACCTACTTATAAAC 12 14018320 0.912550699 5 9 62 0.8125 0.636822098 0 0.166666667 0.375 12 1 2 13 3L:14018308-14018345 7 10.5 2427 FBgn0036398 2404.643333 22.86666667 35.16333333 0.004366552 0.459183673 0.298606503 -4 14 5 0.01 dme-miR-282-5p 6mer3-8 AGAGGC 3L 14019021 14019026 + 3L_14019021_14019026_+ 1 1 1 0 upSET FBtr0075768|FBtr0333050 14017876|14017876 14020148|14020148 3L + 14018767 14019122 3'utr upSET FlyBase G30159.1 ATTTAAAACACATTACCTAGTACAGAACTTGGCAAATAATACAAACTGTAATTGTTAGAGAGACCAGCGAAAACAAAATCCGGAACTAACAAAATTGTAAATAATATTTTTAAAACCCAAACATGAGCAACCAAAAGGATGAAAGTAAAAACTACTTGTCTTATTAAGCAAGTTAGTTAAGTAAGTTAAAAAGAGTACAAAGCGAGGGTTAATTGATTGAAATTATGCTAATGGATCGCATTAAAATTGTAAATAGAGGCAGCAACAGAAAGTGTCCGTAGCCATTTTCGTATATAGGCTTAATTATTTTAATCTTTCGAATTTCGTCTAAAGTAAAATATTCACAAATTAATTGT 108 14019019 0.9727426 37 100 601 0.932835821 2.096910013 0.186567164 0.175925926 0.335820896 108 9 0 125 3L:14018767-14019122 6 upSET FBtr0333050|FBtr0075768 14017876|14017876 14020148|14020148 AGAGGC 6mer3-8 dme-miR-282-5p 3L + 14018846 14019047 3'utr upSET FlyBase G22808.1 CCGGAACTAACAAAATTGTAAATAATATTTTTAAAACCCAAACATGAGCAACCAAAAGGATGAAAGTAAAAACTACTTGTCTTATTAAGCAAGTTAGTTAAGTAAGTTAAAAAGAGTACAAAGCGAGGGTTAATTGATTGAAATTATGCTAATGGATCGCATTAAAATTGTAAATAGAGGCAGCAACAGAAAGTGTCCGTAG 51 14019019 0.974266107 18 40 212 0.911392405 1.556302501 0.164556962 0.431372549 0.632911392 51 6 1 72 3L:14018846-14019047 6 21.5 2428 FBgn0036398 2404.643333 22.86666667 35.16333333 0.008941035 0.940233236 0.611432363 2 2 2 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 3L 14019144 14019149 + 3L_14019144_14019149_+ 1 1 1 0 upSET FBtr0075768|FBtr0333050 14017876|14017876 14020148|14020148 3L + 14019124 14019209 3'utr upSET FlyBase G30160.1 ACATTAATTTGTTTAATACATAGCTTGTCATTAGACTTAGATCAAGATTTTATTCAGATCAATGCTCACCGAGGAATGTGCCACAA 37 14019155 0.990023079 11 33 320 0.904761905 1.579783597 0.023809524 0.135135135 0.238095238 37 4 0 38 3L:14019124-14019209 6 upSET FBtr0333050|FBtr0075768 14017876|14017876 14020148|14020148 TAGCTT 6mer3-8 dme-miR-79-3p 3L + 14019137 14019168 3'utr upSET FlyBase G22809.1 TAATACATAGCTTGTCATTAGACTTAGATCAA 21 14019154 0.711879998 5 17 173 0.848484848 1.146128036 0 0.333333333 0.575757576 21 4 1 28 3L:14019137-14019168 6 26.5 2429 FBgn0036398 2404.643333 22.86666667 35.16333333 0.011020345 1.158892128 0.753625936 -11 -10 -10.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 3L 14019419 14019424 + 3L_14019419_14019424_+ 1 1 1 0 upSET FBtr0075768|FBtr0333050 14017876|14017876 14020148|14020148 3L + 14019386 14019494 3'utr upSET FlyBase G30161.1 AGAAAGAAACTCATTTATGGACCCTGTGAAAAATGATCTATTATTGATTCAGATAGTCTTTGTTACGGATAACAAACTGGACAAAACATGCTGTAAAAAACATAAGTTG 74 14019419 0.944437177 12 73 433 0.987341772 1.892094603 0.063291139 0.067567568 0.126582278 74 1 0 78 3L:14019386-14019494 6 upSET FBtr0333050|FBtr0075768 14017876|14017876 14020148|14020148 TGATCT 6mer3-8 dme-bantam-3p 3L + 14019389 14019431 3'utr upSET FlyBase G22811.1 AAGAAACTCATTTATGGACCCTGTGAAAAATGATCTATTATTG 23 14019419 0.763769552 5 21 158 0.96969697 1.204119983 0.090909091 0.304347826 0.515151515 23 0 1 32 3L:14019389-14019431 6 22 2430 FBgn0036398 2404.643333 22.86666667 35.16333333 0.009148966 0.962099125 0.625651721 0 0 0 0.01 dme-miR-980-5p 7mer-A1 AAAAACA 3L 14019481 14019487 + 3L_14019481_14019487_+ 0.782911824 0.782911824 0.782911824 0 upSET FBtr0075768|FBtr0333050 14017876|14017876 14020148|14020148 3L + 14019386 14019494 3'utr upSET FlyBase G30161.1 AGAAAGAAACTCATTTATGGACCCTGTGAAAAATGATCTATTATTGATTCAGATAGTCTTTGTTACGGATAACAAACTGGACAAAACATGCTGTAAAAAACATAAGTTG 74 14019474 0.944437177 12 73 433 0.987341772 1.892094603 0.063291139 0.067567568 0.126582278 74 1 0 78 3L:14019386-14019494 7 upSET FBtr0333050|FBtr0075768 14017876|14017876 14020148|14020148 AAAAACA 7mer-A1 dme-miR-980-5p 3L + 14019451 14019488 3'utr upSET FlyBase G22812.1 CGGATAACAAACTGGACAAAACATGCTGTAAAAAACAT 27 14019474 0.884103399 3 27 74 1 1.602059991 0 0.37037037 0.575 27 0 0 40 3L:14019451-14019488 7 28 2431 FBgn0036398 2404.643333 22.86666667 35.16333333 0.011644138 1.224489796 0.796284008 7 7 7 0.01 dme-miR-92b-3p 7mer-m1 TGCAATT 3L 14019551 14019557 + 3L_14019551_14019557_+ 0.680550421 0.765586663 0.723068542 0.060129744 upSET FBtr0075768|FBtr0333050 14017876|14017876 14020148|14020148 3L + 14019555 14019618 3'utr upSET FlyBase G30163.1 ATTTTAATTCTAACAAGCAAATCATGCAGGTGGTCTTTGGCGAAGCGCTTTTTAGTTTTAATTT 53 14019579 0.724322249 9 52 390 0.96875 1.792391689 0.3125 0.169811321 0.3125 53 2 0 62 3L:14019555-14019618 2 upSET FBtr0333050|FBtr0075768 14017876|14017876 14020148|14020148 TGCAATT 7mer-m1 dme-miR-92b-3p 3L + 14019548 14019627 3'utr upSET FlyBase G22813.1 ATATGCAATTTTAATTCTAACAAGCAAATCATGCAGGTGGTCTTTGGCGAAGCGCTTTTTAGTTTTAATTTAACATTTAT 32 14019580 0.98857234 11 31 292 0.979591837 1.681241237 0.367346939 0.4375 0.632653061 32 1 0 48 3L:14019548-14019627 7 2 2432 FBgn0036398 2404.643333 22.86666667 35.16333333 0.000831724 0.087463557 0.056877429 -28 -29 -28.5 0.01 dme-miR-305-5p 7mer-m1 GTACAAT 3L 14019735 14019741 + 3L_14019735_14019741_+ 0.765586663 0.765586663 0.765586663 0 upSET FBtr0075768|FBtr0333050 14017876|14017876 14020148|14020148 3L + 14019731 14019820 3'utr upSET FlyBase G30165.1 CGCTGTACAATACAAACAAGACCTATATAAAACCTTTTGTTAGTTATCTATACATAACTGGACAATAGTTCGTAATTTTCGTAATAGTTT 14 14019764 0.973904485 10 14 90 1 1.230448921 0.352941176 0.214285714 0.352941176 14 0 0 17 3L:14019731-14019820 7 upSET FBtr0333050|FBtr0075768 14017876|14017876 14020148|14020148 GTACAAT 7mer-m1 dme-miR-305-5p 3L + 14019728 14019808 3'utr upSET FlyBase G22815.1 TAGCGCTGTACAATACAAACAAGACCTATATAAAACCTTTTGTTAGTTATCTATACATAACTGGACAATAGTTCGTAATTT 9 14019758 0.96402514 6 9 53 1 1.146128036 0.214285714 0.333333333 0.571428571 9 0 0 14 3L:14019728-14019808 7 2.5 2433 FBgn0036398 2404.643333 22.86666667 35.16333333 0.001039655 0.109329446 0.071096786 -29 -23 -26 0.01 dme-miR-970-3p 8mer-A1 TCTTATGA 3L 14021058 14021065 - 3L_14021058_14021065_- 0.630790218 0.630790218 0.630790218 0 ptip FBtr0075784 14020313 14021220 3L - 14020930 14021106 3'utr ptip FlyBase G36703.1 CGCAATGTCATTGGCCATTGATGTTGTAGGCCGCGCCAATTTCTTATGATATACCAACGCGAAACTAGTCCATAGAGTTCGTCAATTCAATCGGGCATGCCGGAACGAATGAGTTTATAGGGTCTCGGGCACATCGGCATATCGGTCACAGCTAGACAAATTTATTGCATCCCCCTA 82 14021066 0.981844784 15 79 588 0.956521739 1.944482672 0.358695652 0.109756098 0.206521739 82 4 0 88 3L:14020930-14021106 8 ptip FBtr0075784 14020313 14021220 TCTTATGA 8mer-A1 dme-miR-970-3p 3L - 14020997 14021088 3'utr ptip FlyBase G27705.1 TGATGTTGTAGGCCGCGCCAATTTCTTATGATATACCAACGCGAAACTAGTCCATAGAGTTCGTCAATTCAATCGGGCATGCCGGAACGAAT 32 14021066 0.999759654 7 31 195 0.955555556 1.633468456 0.177777778 0.28125 0.488888889 32 2 0 43 3L:14020997-14021088 8 40 2434 FBgn0052133 645.9666667 9.623333333 14.77 0.0619227 4.156563907 2.708192282 1 1 1 0.01 dme-miR-317-5p 6mer3-8 GTATCC 3L 14030211 14030216 - 3L_14030211_14030216_- 1 1 1 0 endos FBtr0075782|FBtr0304673|FBtr0075783|FBtr0304674|FBtr0333053|FBtr0333052 14029823|14029823|14029823|14029823|14029823|14029577 14030246|14030246|14030246|14030246|14030246|14030246 3L - 14030080 14030306 stop_codon endos FlyBase G36719.1 GTGCCGGCGCGCAAGACTTCGATCATCCAACCCTGTAACAAGTTCCCGGCGACGAGCTAATTTACTCACCACTCAACACTCACCTCTACTGTATCCACAACCTCAAGTGCAGCCAGTTCTCCGTTCCCCACTTCAAATGCTCTATACCTAATTTTAATGAAAAACCTAATGCTAAGATGGCTGCTGCCGGATTGTGCGGGCATTTCGCGACAGTTTAAACTGAAATT 88 14030199 0.975305488 26 83 523 0.948979592 1.968482949 0.153061224 0.113636364 0.204081633 88 5 0 93 3L:14030080-14030306 6 endos FBtr0333052|FBtr0333053|FBtr0304674|FBtr0075783|FBtr0304673|FBtr0075782 14029577|14029823|14029823|14029823|14029823|14029823 14030246|14030246|14030246|14030246|14030246|14030246 GTATCC 6mer3-8 dme-miR-317-5p 3L - 14029824 14030229 3'utr endos FlyBase G27718.1 ACTCACCTCTACTGTATCCACAACCTCAAGTGCAGCCAGTTCTCCGTTCCCCACTTCAAATGCTCTATACCTAATTTTAATGAAAAACCTAATGCTAAGATGGCTGCTGCCGGATTGTGCGGGCATTTCGCGACAGTTTAAACTGAAATTCTAGCACCATGTTCCGTGTTTCCCCCGTTAAATTCAATCGCCATCCGCACTGGCCAATCAATCTCAAGATCAACTCATCAGTCCATCTCTCAGGCCGGGGAAGCGAAGATGGCGAGCCGAGCAGCGCGAAATTTATTGCAACAGTTATATATATCTCTATCTTTGTAACATTAAACTAACTTACCCTCGTCGTACATAGTTGTAAGTATTACGAGCATAATAAATTTAAGTTGGAGCAGCCAGCCACACACACACA 95 14030199 0.973743565 41 88 535 0.913043478 1.498310554 0.137681159 0.336842105 0.543478261 95 9 3 126 3L:14029824-14030229 6 7.5 2435 FBgn0061515 1583.87 171.8666667 262.4366667 0.004735237 0.043638479 0.028578324 -17 -17 -17 0.01 dme-miR-8-3p 6mer2-7 AGTATT 3L 14034033 14034038 + 3L_14034033_14034038_+ 1 1 1 0 CG6650 FBtr0075769|FBtr0304672|FBtr0343100 14033995|14033995|14033995 14034640|14034640|14034909 3L + 14033968 14034169 stop_codon CG6650 FlyBase G30174.1 CTGCCTCCGGACTCGCGGCACAGTTGTAGGATCGGCTATCACAATGGGACAGGCAAAGACTGCATAGTATTTCACTAGAAACCTGCAATGAAAGACTCGAATAGAAGGCCAGGACGAAACCCCGATGCATTCCCCCGCTGGATGGACATGAACTCGGCATGTTTAGCACCTTAGTGACCTTAGAAACGCGTTACCTTCACAC 165 14034032 0.952965366 23 147 648 0.897297297 1.178715403 0.178378378 0.096969697 0.194594595 165 9 10 166 3L:14033968-14034169 6 CG6650 FBtr0343100|FBtr0075769|FBtr0304672 14033995|14033995|14033995 14034909|14034640|14034640 AGTATT 6mer2-7 dme-miR-8-3p 3L + 14033963 14034171 stop_codon CG6650 FlyBase G22821.1 CATCTCTGCCTCCGGACTCGCGGCACAGTTGTAGGATCGGCTATCACAATGGGACAGGCAAAGACTGCATAGTATTTCACTAGAAACCTGCAATGAAAGACTCGAATAGAAGGCCAGGACGAAACCCCGATGCATTCCCCCGCTGGATGGACATGAACTCGGCATGTTTAGCACCTTAGTGACCTTAGAAACGCGTTACCTTCACACAA 86 14034032 0.946291426 22 77 314 0.875968992 1.149988456 0.147286822 0.418604651 0.612403101 86 9 7 113 3L:14033963-14034171 6 47 2436 FBgn0036402 661.0066667 31.6 48.21 0.07110367 1.487341772 0.974901473 1 1 1 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3L 14034059 14034064 + 3L_14034059_14034064_+ 0.999999787 0.999998649 0.999999218 8.49E-07 CG6650 FBtr0075769|FBtr0304672|FBtr0343100 14033995|14033995|14033995 14034640|14034640|14034909 3L + 14033968 14034169 stop_codon CG6650 FlyBase G30174.1 CTGCCTCCGGACTCGCGGCACAGTTGTAGGATCGGCTATCACAATGGGACAGGCAAAGACTGCATAGTATTTCACTAGAAACCTGCAATGAAAGACTCGAATAGAAGGCCAGGACGAAACCCCGATGCATTCCCCCGCTGGATGGACATGAACTCGGCATGTTTAGCACCTTAGTGACCTTAGAAACGCGTTACCTTCACAC 165 14034032 0.952965366 23 147 648 0.897297297 1.178715403 0.178378378 0.096969697 0.194594595 165 9 10 166 3L:14033968-14034169 6 CG6650 FBtr0343100|FBtr0075769|FBtr0304672 14033995|14033995|14033995 14034909|14034640|14034640 AAGACT 6mer3-8 dme-miR-14-3p 3L + 14033963 14034171 stop_codon CG6650 FlyBase G22821.1 CATCTCTGCCTCCGGACTCGCGGCACAGTTGTAGGATCGGCTATCACAATGGGACAGGCAAAGACTGCATAGTATTTCACTAGAAACCTGCAATGAAAGACTCGAATAGAAGGCCAGGACGAAACCCCGATGCATTCCCCCGCTGGATGGACATGAACTCGGCATGTTTAGCACCTTAGTGACCTTAGAAACGCGTTACCTTCACACAA 86 14034032 0.946291426 22 77 314 0.875968992 1.149988456 0.147286822 0.418604651 0.612403101 86 9 7 113 3L:14033963-14034171 6 32.5 2437 FBgn0036402 661.0066667 31.6 48.21 0.049167431 1.028481013 0.674133997 27 27 27 0.01 dme-miR-33-5p 7mer-A1 AATGCAA 3L 14034323 14034329 + 3L_14034323_14034329_+ 0.782911824 0.782911824 0.782911824 0 CG6650 FBtr0075769|FBtr0304672|FBtr0343100 14033995|14033995|14033995 14034640|14034640|14034909 3L + 14034293 14034376 3'utr CG6650 FlyBase G30176.1 CGTAAATTCCACGTGTTCAAAATTATTCCTAATGCAACAGCATCGAAACTCGGAAACGAATGTCACCTAGTCCTAAGTTATGTT 27 14034316 0.967944191 9 23 176 0.84375 0.829303773 0.09375 0.148148148 0.28125 27 2 3 27 3L:14034293-14034376 7 CG6650 FBtr0343100|FBtr0075769|FBtr0304672 14033995|14033995|14033995 14034909|14034640|14034640 AATGCAA 7mer-A1 dme-miR-33-5p 3L + 14034305 14034371 3'utr CG6650 FlyBase G22822.1 GTGTTCAAAATTATTCCTAATGCAACAGCATCGAAACTCGGAAACGAATGTCACCTAGTCCTAAGTT 18 14034315 0.752093872 5 14 117 0.814814815 0.740362689 0.037037037 0.444444444 0.62962963 18 2 3 22 3L:14034305-14034371 7 12 2438 FBgn0036402 661.0066667 31.6 48.21 0.018154129 0.379746835 0.248911014 7 8 7.5 0.01 dme-bantam-3p 7mer-A1 GATCTCA 3L 14052405 14052411 + 3L_14052405_14052411_+ 0.82332948 0.82334913 0.823339305 1.39E-05 CG6833 FBtr0302433|FBtr0075774 14052207|14052207 14052469|14052469 3L + 14052392 14052422 3'utr CG6833 FlyBase G30205.1 AAAAGCAGGCTCGGATCTCATGATGAAACCA 17 14052412 0.680372651 3 15 65 0.954545455 1.322219295 0.181818182 0.235294118 0.409090909 17 1 0 21 3L:14052392-14052422 7 CG6833 FBtr0302433|FBtr0075774 14052207|14052207 14052469|14052469 GATCTCA 7mer-A1 dme-bantam-3p 3L + 14052393 14052420 3'utr CG6833 FlyBase G22843.1 AAAGCAGGCTCGGATCTCATGATGAAAC 19 14052412 0.65185109 2 19 71 1 1.397940009 0.32 0.315789474 0.48 19 0 0 25 3L:14052393-14052420 7 18 2439 FBgn0036405 208.48 21.87 33.59 0.086339217 0.823045267 0.535873772 -7 -7 -7 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3L 14070252 14070258 + 3L_14070252_14070258_+ 0.443131018 0.443131018 0.443131018 0 CG32138 FBtr0075776|FBtr0075775|FBtr0114573|FBtr0334053 14070133|14070133|14070133|14069144 14070369|14070369|14071583|14070369 3L + 14070143 14070329 3'utr CG32138 FlyBase G30241.1 ACGAGATAGAGATCGACGCAATGACGACGACGGGGCAATGGCAACGAATCGAAAATCAAAATTCACACTGAAACCGAAACAAAAAGAGAACATTACAGATACTGCAATATGTGATTAGGCGATTAAATTGTTTTCGAGACACTCTTACACATACACAAATTCACATTCCCTTTTATGCAAATCCTTA 3892 14070258 0.983714556 28 3721 28137 0.96001729 2.267367313 0.208126216 0.156731757 0.290685109 3892 162 23 4442 3L:14070143-14070329 7 CG32138 FBtr0334053|FBtr0114573|FBtr0075775|FBtr0075776 14069144|14070133|14070133|14070133 14070369|14071583|14070369|14070369 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 14070144 14070333 3'utr CG32138 FlyBase G22873.1 CGAGATAGAGATCGACGCAATGACGACGACGGGGCAATGGCAACGAATCGAAAATCAAAATTCACACTGAAACCGAAACAAAAAGAGAACATTACAGATACTGCAATATGTGATTAGGCGATTAAATTGTTTTCGAGACACTCTTACACATACACAAATTCACATTCCCTTTTATGCAAATCCTTATATT 2356 14070258 0.980988992 30 2208 16293 0.943160691 2.152410664 0.225232404 0.40959253 0.630544489 2356 190 24 3551 3L:14070144-14070333 7 2967 2440 FBgn0267795 5755.37 129.1033333 198.11 0.515518551 22.98159097 14.97652819 -6 -6 -6 0.01 dme-miR-986-5p 6mer3-8 ATTCGA 3L 14070560 14070565 + 3L_14070560_14070565_+ 0.999991984 0.998656606 0.999324295 0.00094427 CG32138 FBtr0114573 14070133 14071583 3L + 14070546 14070586 3'utr CG32138 FlyBase G30243.1 AGTTGAACTTGAAAATTCGAATGGTGTATTTATCAAATCTT 50 14070567 0.802248191 8 45 418 0.918032787 1.748188027 0.016393443 0.22 0.360655738 50 5 0 56 3L:14070546-14070586 6 CG32138 FBtr0114573 14070133 14071583 ATTCGA 6mer3-8 dme-miR-986-5p 3L + 14070545 14070586 3'utr CG32138 FlyBase G22875.1 AAGTTGAACTTGAAAATTCGAATGGTGTATTTATCAAATCTT 43 14070567 0.815548041 4 41 358 0.928571429 1.812913357 0.085714286 0.441860465 0.657142857 43 5 0 65 3L:14070545-14070586 6 44.5 2441 FBgn0267795 5755.37 129.1033333 198.11 0.00773191 0.344685136 0.224622684 -7 -7 -7 0.01 dme-miR-12-5p 6mer3-8 AATACT 3L 14070706 14070711 + 3L_14070706_14070711_+ 1 1 1 0 CG32138 FBtr0114573 14070133 14071583 3L + 14070612 14070737 3'utr CG32138 FlyBase G30244.1 TTACCCTGTGTACATACATATACTTACATATATATCAAATTATATATGTGCTATTTAATTATATTTTTTAAACTTACGTTTTAACCAAATACGAAATACTTGCTGCATCCATCCGAGATGGCAAAT 41 14070711 0.981452416 19 37 302 0.921568627 0.973127854 0.098039216 0.219512195 0.37254902 41 0 4 47 3L:14070612-14070737 6 CG32138 FBtr0114573 14070133 14071583 AATACT 6mer3-8 dme-miR-12-5p 3L + 14070612 14070734 3'utr CG32138 FlyBase G22876.1 TTACCCTGTGTACATACATATACTTACATATATATCAAATTATATATGTGCTATTTAATTATATTTTTTAAACTTACGTTTTAACCAAATACGAAATACTTGCTGCATCCATCCGAGATGGCA 18 14070711 0.988648262 10 15 134 0.846153846 0.740362689 0 0.277777778 0.5 18 1 3 22 3L:14070612-14070734 6 13.5 2442 FBgn0267795 5755.37 129.1033333 198.11 0.002345635 0.104567401 0.06814396 -5 -5 -5 0.01 dme-miR-932-5p 6mer2-7 GAATTG 3L 14070817 14070822 + 3L_14070817_14070822_+ 1 1 1 0 CG32138 FBtr0114573 14070133 14071583 3L + 14070770 14070855 3'utr CG32138 FlyBase G30245.1 TCCGAATTTTAATTAATTTTATGAAATTAGTAAGTCAAATAAGCATTGAATTGTATGAGAAGAGAGTAAAACGCATTAAACTTTTG 30 14070820 0.977059685 12 28 179 0.971428571 1.531478917 0.485714286 0.1 0.228571429 30 1 0 34 3L:14070770-14070855 6 CG32138 FBtr0114573 14070133 14071583 GAATTG 6mer2-7 dme-miR-932-5p 3L + 14070798 14070836 3'utr CG32138 FlyBase G22877.1 AGTAAGTCAAATAAGCATTGAATTGTATGAGAAGAGAGT 15 14070820 0.599484248 5 15 79 1 1.342422681 0.318181818 0.266666667 0.5 15 0 0 22 3L:14070798-14070836 6 18.5 2443 FBgn0267795 5755.37 129.1033333 198.11 0.003214389 0.143296068 0.093382464 -3 -3 -3 0.01 dme-miR-184-5p 8mer-A1 TGATAAGA 3L 14071464 14071471 + 3L_14071464_14071471_+ 0.601217767 0.601217767 0.601217767 0 CG32138 FBtr0114573 14070133 14071583 3L + 14071442 14071584 3'utr CG32138 FlyBase G30249.1 TTAAATATTGTGTTATTTAATTTGATAAGACGCCAGCATGGTATACGAGGAGCGAAAGTGAAGGGAAATCGATATATTAAATATAAAATGCCGGATCTTTTGTACACATTTACATGACTATATTGAACACTCGAACTATTTTA 83 14071480 0.966524626 18 81 453 0.97826087 1.653212514 0.195652174 0.108433735 0.195652174 83 1 1 90 3L:14071442-14071584 8 CG32138 FBtr0114573 14070133 14071583 TGATAAGA 8mer-A1 dme-miR-184-5p 3L + 14071451 14071507 3'utr CG32138 FlyBase G22881.1 GTGTTATTTAATTTGATAAGACGCCAGCATGGTATACGAGGAGCGAAAGTGAAGGGA 32 14071480 0.943896893 6 26 93 0.785714286 1.041392685 0.238095238 0.1875 0.380952381 32 7 2 33 3L:14071451-14071507 8 21.5 2444 FBgn0267795 5755.37 129.1033333 198.11 0.003735642 0.166533268 0.108525567 -16 -16 -16 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA 3L 143868 143873 + 3L_143868_143873_+ 1 1 1 0 Pdk1 FBtr0072464|FBtr0072470|FBtr0072467|FBtr0072471|FBtr0072466|FBtr0072465|FBtr0333218 143819|143819|143819|143819|143819|143819|143819 144642|145293|145293|145293|145293|144642|145895 3L + 143737 144054 stop_codon Pdk1 FlyBase G26662.1 CAAGCTTCGACGGCGTCTGACAACCGGACATTGGGTAGCACCAGAACGGGGACGTCACCTAGCAAGAAGACGGCGTCTAAGTAAACGTAGTCCTATTTATAGCAATGTGAAATTAATTTAGTTGAAATTTAGTGCAAACGAAGCGATGGCGTAGAAGAGGGCGGGAATAGAAGTAAGCTTAGAAGTAGAAGTAAGTGATGAAGGGGAAATAATGATCGTGTCTCTAGTGCTAATTAGAACCAAATTTCTGTTTTCCGATTTGTATTGTGCTTAGGGCGAAAATATAACACTAGAATAAACTTATCTAAAGTAAAATAC 336 143865 0.981656492 48 321 2349 0.955380577 1.782950133 0.367454068 0.119047619 0.223097113 336 12 5 364 3L:143737-144054 6 Pdk1 FBtr0333218|FBtr0072468|FBtr0072470|FBtr0072466|FBtr0072465|FBtr0072464|FBtr0072469|FBtr0072467|FBtr0072471 143819|143819|143819|143819|143819|143819|143819|143819|143819 145895|144054|145293|145293|144642|144642|144054|145293|145293 GTGCAA 6mer3-8 dme-miR-92b-3p 3L + 143815 143909 stop_codon Pdk1 FlyBase G20164.1 AAGTAAACGTAGTCCTATTTATAGCAATGTGAAATTAATTTAGTTGAAATTTAGTGCAAACGAAGCGATGGCGTAGAAGAGGGCGGGAATAGAAG 169 143865 0.976748223 12 158 1070 0.930041152 1.752048448 0.440329218 0.343195266 0.543209877 169 14 3 226 3L:143815-143909 6 168.5 2445 FBgn0020386 1614.923333 45.11666667 69.42333333 0.104339318 3.734761729 2.42713785 3 3 3 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3L 144608 144613 + 3L_144608_144613_+ 1 1 1 0 Pdk1 FBtr0072464|FBtr0072470|FBtr0072467|FBtr0072471|FBtr0072466|FBtr0072465|FBtr0333218 143819|143819|143819|143819|143819|143819|143819 144642|145293|145293|145293|145293|144642|145895 3L + 144538 144629 5'utr Pdk1 FlyBase G26667.1 CGCTAATTATCATTATTTATCATTCTCATTATGCTTTTCGTTTACCTATTTGCCCTATAATGAAATGTATAAGACTTGAGCTACCCTAATAA 64 144578 0.990181488 16 62 622 0.972972973 1.857332496 0.121621622 0.15625 0.27027027 64 2 0 72 3L:144538-144629 6 Pdk1 FBtr0333218|FBtr0072470|FBtr0072466|FBtr0072465|FBtr0072464|FBtr0072467|FBtr0072471 143819|143819|143819|143819|143819|143819|143819 145895|145293|145293|144642|144642|145293|145293 AAGACT 6mer3-8 dme-miR-14-3p 3L + 144499 144627 5'utr Pdk1 FlyBase G20169.1 CACGCTCAACTGTTTAGGTAATTCTAATATACAGTTTAACGCTAATTATCATTATTTATCATTCTCATTATGCTTTTCGTTTACCTATTTGCCCTATAATGAAATGTATAAGACTTGAGCTACCCTAAT 44 144587 0.986589864 15 40 398 0.876923077 1.755874856 0.184615385 0.386363636 0.584615385 44 8 0 57 3L:144499-144627 6 19.5 2446 FBgn0020386 1614.923333 45.11666667 69.42333333 0.012074877 0.432212782 0.280885389 30 21 25.5 0.01 dme-miR-14-3p 6mer2-7 AGACTG 3L 144795 144800 + 3L_144795_144800_+ 1 1 1 0 Pdk1 FBtr0072470|FBtr0072467|FBtr0072471|FBtr0072466|FBtr0333218 143819|143819|143819|143819|143819 145293|145293|145293|145293|145895 3L + 144747 144830 5'utr Pdk1 FlyBase G26669.1 GTGTGTAAAACAAGTCTTATACAAAGATATATGTAATAGATGTAAGACAGACTGCAAAGTTTCTTGAAACAAATTAGTTAAATG 62 144787 0.843492809 9 57 404 0.942028986 1.511883361 0.15942029 0.112903226 0.202898551 62 3 1 65 3L:144747-144830 6 Pdk1 FBtr0333218|FBtr0072470|FBtr0072466|FBtr0072467|FBtr0072471 143819|143819|143819|143819|143819 145895|145293|145293|145293|145293 AGACTG 6mer2-7 dme-miR-14-3p 3L + 144749 144830 5'utr Pdk1 FlyBase G20170.1 GTGTAAAACAAGTCTTATACAAAGATATATGTAATAGATGTAAGACAGACTGCAAAGTTTCTTGAAACAAATTAGTTAAATG 39 144787 0.839181947 7 33 220 0.822580645 0.929418926 0.177419355 0.384615385 0.612903226 39 6 5 51 3L:144749-144830 6 31 2447 FBgn0020386 1614.923333 45.11666667 69.42333333 0.019195958 0.687107499 0.446535747 8 8 8 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3L 14539898 14539903 + 3L_14539898_14539903_+ 1 1 1 0 Mpcp FBtr0308595|FBtr0075718|FBtr0075719 14539891|14539891|14539891 14540441|14540441|14540441 3L + 14539881 14540033 stop_codon Mpcp FlyBase G30271.1 AAGCAGCATTAAGTGGGCTAGTCCAATTGGTTACCTTAAGGACAGAGTTCACTAGTTGGAGCGATTGTGGGCAGACACAGGAGCAACATACTTTTACTTTCTAACGAATTTCGGTTTCAGTATAGCGAAAATGCTTTATACTTGTTTCTCAGC 70 14539908 0.976732454 19 68 456 0.975609756 1.903089987 0.304878049 0.157142857 0.280487805 70 2 0 80 3L:14539881-14540033 6 Mpcp FBtr0308595|FBtr0075718|FBtr0075719 14539891|14539891|14539891 14540441|14540441|14540441 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3L + 14539858 14539996 stop_codon Mpcp FlyBase G22899.1 AGATGCCAGCTAGCCTGAAGGCCAAGCAGCATTAAGTGGGCTAGTCCAATTGGTTACCTTAAGGACAGAGTTCACTAGTTGGAGCGATTGTGGGCAGACACAGGAGCAACATACTTTTACTTTCTAACGAATTTCGGTT 41 14539908 0.973140363 17 40 243 0.983050847 1.763427994 0.254237288 0.365853659 0.559322034 41 1 0 58 3L:14539858-14539996 6 32.5 2448 FBgn0026409 3078.873333 220.3166667 336.4133333 0.010555809 0.147514941 0.096607348 -10 -10 -10 0.01 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 14541397 14541404 - 3L_14541397_14541404_- 0.643565469 0.643565469 0.643565469 0 Gbs-70E FBtr0333037|FBtr0075724 14540935|14541044 14542118|14542118 3L - 14541352 14541432 3'utr Gbs-70E FlyBase G36754.1 TTTTATCTTTTTGGTTACTTGAAACGCTAAGACTGAAATGGCTTGTTATGGAGAAGAAAACACGTCCTGCAATACATTATA 403 14541405 0.934959122 14 377 2083 0.931623932 1.794388449 0.162393162 0.141439206 0.260683761 403 26 6 436 3L:14541352-14541432 8 Gbs-70E FBtr0075724|FBtr0333037 14541044|14540935 14542118|14542118 AAGACTGA 8mer-A1 dme-miR-14-3p 3L - 14541350 14541420 3'utr Gbs-70E FlyBase G27745.1 GGTTACTTGAAACGCTAAGACTGAAATGGCTTGTTATGGAGAAGAAAACACGTCCTGCAATACATTATATA 261 14541405 0.91487113 10 236 1092 0.908641975 1.963787827 0.187654321 0.390804598 0.607407407 261 34 3 368 3L:14541350-14541420 8 317 2449 FBgn0036428 388.9433333 16.83333333 25.64666667 0.815028753 18.83168317 12.36028074 1 1 1 0.01 dme-miR-1006-3p 6mer2-7 GAATTT 3L 14541613 14541618 - 3L_14541613_14541618_- 1 1 1 0 Gbs-70E FBtr0333037|FBtr0075724|FBtr0075723 14540935|14541044|14541535 14542118|14542118|14542118 3L - 14541586 14541628 3'utr Gbs-70E FlyBase G36755.2 GAAAGGAGATGAATTTTGAGGCGTGAAGCATTCAAGCAAACCA 12 14541612 0.680673601 5 10 48 0.923076923 1.079181246 0.538461538 0.083333333 0.153846154 12 1 0 12 3L:14541586-14541628 6 Gbs-70E FBtr0075723|FBtr0075724|FBtr0333037 14541535|14541044|14540935 14542118|14542118|14542118 GAATTT 6mer2-7 dme-miR-1006-3p 3L - 14541563 14541631 3'utr Gbs-70E FlyBase G27746.1 AATGAAAGGAGATGAATTTTGAGGCGTGAAGCATTCAAGCAAACCATTGTTTCGAAATTTACTGCAACT 15 14541612 0.963503076 7 15 78 1 1.342422681 0.318181818 0.4 0.590909091 15 0 0 22 3L:14541563-14541631 6 9.5 2450 FBgn0036428 388.9433333 16.83333333 25.64666667 0.024425152 0.564356436 0.370418508 -6 -6 -6 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 14541698 14541703 - 3L_14541698_14541703_- 1 1 1 0 Gbs-70E FBtr0333037|FBtr0333037|FBtr0333037|FBtr0075724|FBtr0075724|FBtr0075724|FBtr0075723|FBtr0075723|FBtr0075723 14540935|14540935|14540935|14541044|14541044|14541044|14541535|14541535|14541535 14542118|14542118|14542118|14542118|14542118|14542118|14542118|14542118|14542118 3L - 14541662 14541741 3'utr Gbs-70E FlyBase G36756.1 TTGGAAAAGATAGATTTATATGTTTACCTGTATGCCTGTGTGATCGTCTACATCTATATAACTGATACTAGATTTATGTT 30 14541705 0.863588096 9 27 255 0.906976744 1.290034611 0.046511628 0.3 0.511627907 30 3 1 39 3L:14541662-14541741 6 Gbs-70E FBtr0075723|FBtr0075723|FBtr0075723|FBtr0075724|FBtr0075724|FBtr0075724|FBtr0333037|FBtr0333037|FBtr0333037 14541535|14541535|14541535|14541044|14541044|14541044|14540935|14540935|14540935 14542118|14542118|14542118|14542118|14542118|14542118|14542118|14542118|14542118 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 14541653 14541716 3'utr Gbs-70E FlyBase G27747.1 ACCTGTATGCCTGTGTGATCGTCTACATCTATATAACTGATACTAGATTTATGTTAACTAAAAA 16 14541705 0.759781657 10 16 134 1 1.342422681 0.045454545 0.125 0.363636364 16 0 0 22 3L:14541653-14541716 6 14.5 2451 FBgn0036428 388.9433333 16.83333333 25.64666667 0.037280495 0.861386139 0.565375617 2 2 2 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 3L 14541898 14541903 - 3L_14541898_14541903_- 0.999961382 0.999986554 0.999973968 1.78E-05 Gbs-70E FBtr0333037|FBtr0075724|FBtr0075723 14540935|14541044|14541535 14542118|14542118|14542118 3L - 14541882 14541950 3'utr Gbs-70E FlyBase G36757.1 TGACCTAAGCTAATACCCGGTACAAATATCCCAATTTTAATGTGCCATTGACTTGAGGTTTACTCAATA 15 14541901 0.896376721 4 12 108 0.833333333 0.875061263 0 0.2 0.333333333 15 2 1 15 3L:14541882-14541950 6 Gbs-70E FBtr0075723|FBtr0075724|FBtr0333037 14541535|14541044|14540935 14542118|14542118|14542118 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 14541861 14541913 3'utr Gbs-70E FlyBase G27748.1 TAATGTGCCATTGACTTGAGGTTTACTCAATATAAAATGAGATAGGAGGGCTT 12 14541896 0.985621338 8 11 82 0.894736842 1.230448921 0 0.5 0.684210526 12 2 0 17 3L:14541861-14541913 6 9 2452 FBgn0036428 388.9433333 16.83333333 25.64666667 0.023139618 0.534653465 0.350922797 -2 -7 -4.5 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 3L 14541925 14541931 - 3L_14541925_14541931_- 0.782911824 0.782437852 0.782674838 0.000335098 Gbs-70E FBtr0333037|FBtr0075724|FBtr0075723 14540935|14541044|14541535 14542118|14542118|14542118 3L - 14541882 14541950 3'utr Gbs-70E FlyBase G36757.1 TGACCTAAGCTAATACCCGGTACAAATATCCCAATTTTAATGTGCCATTGACTTGAGGTTTACTCAATA 15 14541937 0.896376721 4 12 108 0.833333333 0.875061263 0 0.2 0.333333333 15 2 1 15 3L:14541882-14541950 7 Gbs-70E FBtr0075723|FBtr0075724|FBtr0333037 14541535|14541044|14540935 14542118|14542118|14542118 GTACAAA 7mer-A1 dme-miR-305-5p 3L - 14541924 14541965 3'utr Gbs-70E FlyBase G27749.1 ACTAACGAAACTTTTTGACCTAAGCTAATACCCGGTACAAAT 6 14541937 0.952401687 3 6 28 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3L:14541924-14541965 7 5 2453 FBgn0036428 388.9433333 16.83333333 25.64666667 0.012855343 0.297029703 0.194957109 6 6 6 0.01 dme-miR-11-3p 7mer-m1 TGTGATG 3L 14628472 14628478 - 3L_14628472_14628478_- 0.612071121 0.612071121 0.612071121 0 RecQ5 FBtr0100362|FBtr0075714 14628158|14628158 14630439|14630508 3L - 14628457 14628496 5'utr-intron RecQ5 FlyBase G36768.1 TTGCTCACTCAGCGCATTTGTGATGGAAGCTTAGGTAAGA 17 14628479 0.752964507 3 17 106 1 1.380211242 0 0.235294118 0.458333333 17 0 0 24 3L:14628457-14628496 7 RecQ5 FBtr0075714|FBtr0100362 14628158|14628158 14630508|14630439 TGTGATG 7mer-m1 dme-miR-11-3p 3L - 14628464 14628504 5'utr RecQ5 FlyBase G27756.1 TGGCAAAATTGCTCACTCAGCGCATTTGTGATGGAAGCTTA 12 14628479 0.71989218 4 11 77 0.823529412 1.146128036 0 0.333333333 0.529411765 12 3 0 14 3L:14628464-14628504 7 14.5 2454 FBgn0027375 1332.03 47.24333333 72.63666667 0.010885641 0.306921612 0.199623698 1 1 1 0.01 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 14630025 14630031 - 3L_14630025_14630031_- 0.823349562 0.823349562 0.823349562 0 RecQ5 FBtr0100362|FBtr0075714 14628158|14628158 14630439|14630508 3L - 14629970 14630054 5'utr RecQ5 FlyBase G36773.1 TTAATCTTCGAAAGCAAATTAGTGCAGCTAGGCAGTTGGAACAGGAAACAATTGCTCAAATATCTCGCGTTCGAATGGCAGAAGC 14 14630035 0.969930584 8 12 70 0.933333333 1.146128036 0.2 0.071428571 0.133333333 14 1 0 14 3L:14629970-14630054 7 RecQ5 FBtr0075714|FBtr0100362 14628158|14628158 14630508|14630439 GCAGCTA 7mer-A1 dme-miR-980-3p 3L - 14630014 14630050 5'utr RecQ5 FlyBase G27759.1 TCTTCGAAAGCAAATTAGTGCAGCTAGGCAGTTGGAA 12 14630035 0.688493435 4 12 50 1 1.230448921 0.235294118 0.25 0.470588235 12 0 0 17 3L:14630014-14630050 7 10 2455 FBgn0027375 1332.03 47.24333333 72.63666667 0.007507338 0.211670077 0.137671516 4 4 4 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 3L 14670961 14670966 + 3L_14670961_14670966_+ 0.999999997 1 0.999999998 0 dlp FBtr0333032|FBtr0075679 14670617|14670617 14671609|14671609 3L + 14670957 14671012 3'utr dlp FlyBase G30279.1 AGGAGAAAAAGAAATTAGTGGAGGAGAGAGAATACGTAACGAGCCCATTTTAGTTT 11 14670990 0.948983077 4 9 42 0.846153846 0.740362689 0.307692308 0.090909091 0.230769231 11 1 1 11 3L:14670957-14671012 6 dlp FBtr0333032|FBtr0075679 14670617|14670617 14671609|14671609 GAAAAA 6mer3-8 dme-miR-980-5p 3L + 14670947 14671010 3'utr dlp FlyBase G22905.1 GAGACCCGATAGGAGAAAAAGAAATTAGTGGAGGAGAGAGAATACGTAACGAGCCCATTTTAGT 13 14670990 0.944740451 6 12 50 0.941176471 0.903089987 0.176470588 0.307692308 0.470588235 13 0 1 16 3L:14670947-14671010 6 2.5 2456 FBgn0041604 137 4.42 6.823333333 0.018248175 0.56561086 0.366389839 -29 -29 -29 0.01 dme-miR-1007-3p 7mer-m8 TGAGCTT 3L 1467403 1467409 + 3L_1467403_1467409_+ 0.620203442 0.620203442 0.620203442 0 rho FBtr0333207|FBtr0072694 1467352|1467352 1468944|1468475 3L + 1467394 1467441 3'utr rho FlyBase G27088.1 GAATCTGCTTGAGCTTCAGGAGAGATCGAGAGACAGAGAGTTGGTGGA 9 1467408 0.955610728 4 8 36 0.9 0.954242509 0.4 0.111111111 0.2 9 1 0 9 3L:1467394-1467441 7 rho FBtr0333207|FBtr0072694 1467352|1467352 1468944|1468475 TGAGCTT 7mer-m8 dme-miR-1007-3p 3L + 1467397 1467436 3'utr rho FlyBase G20506.1 TCTGCTTGAGCTTCAGGAGAGATCGAGAGACAGAGAGTTG 10 1467405 0.671125668 3 6 33 0.6875 0.740362689 0.9375 0.4 0.625 10 4 1 11 3L:1467397-1467436 7 6.5 2457 FBgn0004635 880.87 41.8 65 0.007379068 0.155502392 0.1 -5 -2 -3.5 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 3L 1467539 1467544 + 3L_1467539_1467544_+ 1 1 1 0 rho FBtr0333207|FBtr0072694 1467352|1467352 1468944|1468475 3L + 1467508 1467555 3'utr rho FlyBase G27089.1 TTAGCATTATCTCGTTATCGTTACCGTTTGCAGTTAAACGTTTCAGTT 6 1467535 0.990548828 3 5 62 0.888888889 0.602059991 0 0.333333333 0.555555556 6 0 1 8 3L:1467508-1467555 6 rho FBtr0333207|FBtr0072694 1467352|1467352 1468944|1468475 AGTTAA 6mer3-8 dme-miR-999-3p 3L + 1467505 1467555 3'utr rho FlyBase G20507.1 TCGTTAGCATTATCTCGTTATCGTTACCGTTTGCAGTTAAACGTTTCAGTT 7 1467535 0.986245425 3 7 60 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 3L:1467505-1467555 6 4 2458 FBgn0004635 880.87 41.8 65 0.004540965 0.09569378 0.061538462 4 4 4 0.01 dme-miR-307a-3p 7mer-A1 GTTGTGA 3L 1467675 1467681 + 3L_1467675_1467681_+ 0.821676056 0.822398293 0.822037175 0.000510673 rho FBtr0333207|FBtr0072694 1467352|1467352 1468944|1468475 3L + 1467651 1467702 3'utr rho FlyBase G27090.1 CGAAGCCGAAACGTGTAAACAAATGTTGTGATAGAACCAAAGACTGAATTTA 65 1467675 0.842953324 5 60 354 0.936708861 1.568201724 0 0.2 0.341772152 65 4 1 74 3L:1467651-1467702 7 rho FBtr0333207|FBtr0072694 1467352|1467352 1468944|1468475 GTTGTGA 7mer-A1 dme-miR-307a-3p 3L + 1467657 1467703 3'utr rho FlyBase G20508.1 CGAAACGTGTAAACAAATGTTGTGATAGAACCAAAGACTGAATTTAT 60 1467674 0.829437338 7 56 327 0.94047619 1.897627091 0.023809524 0.3 0.5 60 5 0 79 3L:1467657-1467703 7 59 2459 FBgn0004635 880.87 41.8 65 0.066979236 1.411483254 0.907692308 0 1 0.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 3L 14750650 14750655 - 3L_14750650_14750655_- 1 1 1 0 Trl FBtr0075705|FBtr0075706|FBtr0333046 14750240|14750240|14750240 14751158|14752905|14751158 3L - 14750615 14750709 5'utr Trl FlyBase G36781.1 TAAGTTTAAAAATCCTTGAGTTACAAAGATTTACTTAAGCAGCTCAAAAGTAATTGATCTGATCAAAAGAGAGTTCGCTCAACAAGGTTTCTAAA 27 14750656 0.97315691 9 26 158 0.971428571 1.230448921 0.114285714 0.259259259 0.428571429 27 0 1 34 3L:14750615-14750709 6 Trl FBtr0333046|FBtr0075705|FBtr0075706 14750240|14750240|14750240 14751158|14751158|14752905 TGATCT 6mer3-8 dme-bantam-3p 3L - 14750600 14750677 5'utr Trl FlyBase G27765.1 ACTTAAGCAGCTCAAAAGTAATTGATCTGATCAAAAGAGAGTTCGCTCAACAAGGTTTCTAAAAACCCACCCACCAAC 19 14750656 0.968011888 3 18 103 1 1.397940009 0.24 0.263157895 0.44 19 0 0 25 3L:14750600-14750677 6 17 2460 FBgn0013263 1897.606667 85.71333333 130.6566667 0.008958653 0.198335537 0.130111998 1 1 1 0.01 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3L 14750824 14750831 - 3L_14750824_14750831_- 0.63113665 0.63113665 0.63113665 0 Trl FBtr0075705|FBtr0075706|FBtr0333046 14750240|14750240|14750240 14751158|14752905|14751158 3L - 14750731 14750876 5'utr Trl FlyBase G36782.1 TTATCATTTTGTATGGTTTTACAAATGTCCCAATGCTAGAGGACCTCTAGTCATTTTGAAGTCCTGCAGATCAGTAAACACCTTAATCCAACAAGGATCCCTTGCTCACGTCCAGATTTTGGCCATGAACGAATGCACCTTGATTT 36 14750831 0.985527625 13 31 255 0.888888889 1 0.088888889 0.222222222 0.377777778 36 2 3 40 3L:14750731-14750876 8 Trl FBtr0333046|FBtr0075705|FBtr0075706 14750240|14750240|14750240 14751158|14751158|14752905 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L - 14750731 14750843 5'utr Trl FlyBase G27766.1 TGCTAGAGGACCTCTAGTCATTTTGAAGTCCTGCAGATCAGTAAACACCTTAATCCAACAAGGATCCCTTGCTCACGTCCAGATTTTGGCCATGAACGAATGCACCTTGATTT 34 14750831 0.936371086 15 33 208 0.97826087 1.653212514 0.173913043 0.352941176 0.52173913 34 1 0 45 3L:14750731-14750843 8 17 2461 FBgn0013263 1897.606667 85.71333333 130.6566667 0.008958653 0.198335537 0.130111998 0 0 0 0.01 dme-miR-965-3p 6mer2-7 ACGCTT 3L 14751088 14751093 - 3L_14751088_14751093_- 1 1 1 0 Trl FBtr0075705|FBtr0075706|FBtr0333046|FBtr0075703 14750240|14750240|14750240|14750952 14751158|14752905|14751158|14751158 3L - 14751060 14751100 5'utr Trl FlyBase G36784.1 TTGCTAAACGCTTTAAATATTCTCTTTGCGGAATGCGTAGA 5 14751074 0.970214971 5 5 44 1 0.698970004 0.2 0 0 5 0 0 5 3L:14751060-14751100 6 Trl FBtr0333046|FBtr0075703|FBtr0075705|FBtr0075706 14750240|14750952|14750240|14750240 14751158|14751158|14751158|14752905 ACGCTT 6mer2-7 dme-miR-965-3p 3L - 14751016 14751111 5'utr Trl FlyBase G27768.1 AATTTGGGTTTTTGCTAAACGCTTTAAATATTCTCTTTGCGGAATGCGTAGACAAATTCTAAATTAGTTTTAGAAAGCCAGAAAGGCATATTTAGT 13 14751087 0.986098189 8 12 99 0.944444444 0.929418926 0.333333333 0.384615385 0.555555556 13 0 1 17 3L:14751016-14751111 6 4.5 2462 FBgn0013263 1897.606667 85.71333333 130.6566667 0.002371408 0.052500583 0.034441411 -19 -6 -12.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 14751458 14751463 - 3L_14751458_14751463_- 1 1 1 0 Trl FBtr0075707|FBtr0075706 14747927|14750240 14752905|14752905 3L - 14751417 14751481 5'utr Trl FlyBase G36788.1 AACAACAGCTGCAACATCACCAAATCATAGACTCGTCGGGCAACATTACAACAGCAACAACGAGT 162 14751454 0.939688605 6 157 621 0.973544974 2.264817823 0.015873016 0.12962963 0.253968254 162 5 0 184 3L:14751417-14751481 6 Trl FBtr0075706|FBtr0075707 14750240|14747927 14752905|14752905 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 14751430 14751480 5'utr Trl FlyBase G27772.1 ACAACAGCTGCAACATCACCAAATCATAGACTCGTCGGGCAACATTACAAC 90 14751454 0.795926118 4 90 344 1 2.133538908 0.022058824 0.377777778 0.588235294 90 0 0 136 3L:14751430-14751480 6 121 2463 FBgn0013263 1897.606667 85.71333333 130.6566667 0.063764531 1.411682352 0.926091282 -9 -9 -9 0.01 dme-bantam-3p 6mer3-8 TGATCT 3L 14752760 14752765 - 3L_14752760_14752765_- 0.50199096 0.980858141 0.74142455 0.338610174 Trl FBtr0075707|FBtr0075706 14747927|14750240 14752905|14752905 3L - 14752726 14752795 5'utr Trl FlyBase G36795.1 ATAACAATCAGCAAACAAACAAATTCCCCGTGATCTGATCGAATGATTTGTGTTCATTTCCTGTATCATT 294 14752748 0.637609015 11 286 2205 0.971590909 2.534026106 0.09375 0.173469388 0.309659091 294 10 0 342 3L:14752726-14752795 6 Trl FBtr0075706|FBtr0075707 14750240|14747927 14752905|14752905 TGATCT 6mer3-8 dme-bantam-3p 3L - 14752723 14752828 5'utr Trl FlyBase G27776.1 AAAAAACATAACACTCACAAAAACGATTTGTAAATAACAATCAGCAAACAAACAAATTCCCCGTGATCTGATCGAATGATTTGTGTTCATTTCCTGTATCATTTTT 243 14752748 0.98289456 13 237 1790 0.975903614 2.209515015 0.135542169 0.308641975 0.493975904 243 7 1 324 3L:14752723-14752828 6 223 2464 FBgn0013263 1897.606667 85.71333333 130.6566667 0.117516451 2.601695574 1.706763273 -17 -17 -17 0.01 dme-miR-8-3p 6mer3-8 CAGTAT 3L 14766285 14766290 + 3L_14766285_14766290_+ 0.999999997 1 0.999999998 0 CG9384 FBtr0333044|FBtr0075690 14765702|14765702 14767703|14767703 3L + 14766266 14766296 3'utr CG9384 FlyBase G30297.1 TTGTTTAATCCCAAGCTGTCAGTATATTTTT 7 14766282 0.888513821 2 7 66 1 0.84509804 0 0 0 7 0 0 7 3L:14766266-14766296 6 CG9384 FBtr0333044|FBtr0075690 14765702|14765702 14767703|14767703 CAGTAT 6mer3-8 dme-miR-8-3p 3L + 14766269 14766319 3'utr CG9384 FlyBase G22916.1 TTTAATCCCAAGCTGTCAGTATATTTTTCGCATAACCATATGGATTTGATA 11 14766284 0.741560886 7 8 82 0.75 1.079181246 0 0.363636364 0.5625 11 4 0 12 3L:14766269-14766319 6 7.5 2465 FBgn0036446 489.33 13.20333333 20.20333333 0.01532708 0.568038374 0.37122587 3 1 2 0.01 dme-miR-970-3p 6mer3-8 TCTTAT 3L 14766593 14766598 + 3L_14766593_14766598_+ 1 1 1 0 CG9384 FBtr0333044|FBtr0075690 14765702|14765702 14767703|14767703 3L + 14766564 14766619 3'utr CG9384 FlyBase G30301.1 AGTGATTAAGAATCTCGAACCCGCTGAAATCTTATCGATCAATTAAGAATTAAGAA 7 14766596 0.975953937 5 6 34 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3L:14766564-14766619 6 CG9384 FBtr0333044|FBtr0075690 14765702|14765702 14767703|14767703 TCTTAT 6mer3-8 dme-miR-970-3p 3L + 14766563 14766601 3'utr CG9384 FlyBase G22917.1 AAGTGATTAAGAATCTCGAACCCGCTGAAATCTTATCGA 6 14766595 0.961214724 5 6 27 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 3L:14766563-14766601 6 4 2466 FBgn0036446 489.33 13.20333333 20.20333333 0.008174443 0.3029538 0.197987131 -3 -2 -2.5 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3L 14766729 14766734 + 3L_14766729_14766734_+ 1 1 1 0 CG9384 FBtr0333044|FBtr0075690 14765702|14765702 14767703|14767703 3L + 14766709 14766807 3'utr CG9384 FlyBase G30302.1 ATGAATTCACCCATCATGCTTGTGTTAGTTTTATATAGCCACGTTCTTGAAGATGAAGCCATAACTACATACATAAATAAAATATGCATGAACATAAAC 38 14766725 0.993960087 8 35 425 0.951219512 1.591064607 0.219512195 0.054054054 0.146341463 37 2 0 39 3L:14766709-14766807 6 CG9384 FBtr0333044|FBtr0075690 14765702|14765702 14767703|14767703 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 14766708 14766748 3'utr CG9384 FlyBase G22919.1 TATGAATTCACCCATCATGCTTGTGTTAGTTTTATATAGCC 17 14766725 0.83073772 3 14 187 0.884615385 1.06069784 0.346153846 0.294117647 0.538461538 17 2 1 23 3L:14766708-14766748 6 24.5 2467 FBgn0036446 489.33 13.20333333 20.20333333 0.050068461 1.855592022 1.212671176 4 4 4 0.01 dme-miR-308-3p 8mer-m1 CTGTGATT 3L 14766856 14766863 + 3L_14766856_14766863_+ 0.385560641 0.385560641 0.385560641 0 CG9384 FBtr0333044|FBtr0075690 14765702|14765702 14767703|14767703 3L + 14766816 14766875 3'utr CG9384 FlyBase G30302.2 ATTAAATAACGAAACGATTTTTAGCATTGTTGCTTTTTTACTGTGATTTGTTAATAATTT 49 14766863 0.696481717 10 47 614 0.966101695 1.755874856 0.152542373 0.163265306 0.305084746 49 2 0 57 3L:14766816-14766875 8 CG9384 FBtr0333044|FBtr0075690 14765702|14765702 14767703|14767703 CTGTGATT 8mer-m1 dme-miR-308-3p 3L + 14766830 14766874 3'utr CG9384 FlyBase G22920.1 CGATTTTTAGCATTGTTGCTTTTTTACTGTGATTTGTTAATAATT 37 14766863 0.715685298 10 37 474 1 1.681241237 0.104166667 0.216216216 0.395833333 37 0 0 48 3L:14766830-14766874 8 39 2468 FBgn0036446 489.33 13.20333333 20.20333333 0.079700815 2.953799546 1.930374526 -7 -7 -7 0.01 dme-miR-283-5p 6mer2-7 GATATT 3L 14769424 14769429 - 3L_14769424_14769429_- 1 1 1 0 mop FBtr0075700 14769339 14769665 3L - 14769422 14769460 3'utr mop FlyBase G36810.1 CGAAATCGAAACCGAATCGTGATGTGTATGGGATATTGT 15 14769436 0.678040115 2 15 79 1 1.255272505 0.111111111 0.2 0.333333333 15 0 0 18 3L:14769422-14769460 6 mop FBtr0075700 14769339 14769665 GATATT 6mer2-7 dme-miR-283-5p 3L - 14769426 14769492 3'utr mop FlyBase G27790.1 CGTCTCTTTCAACTGTTATATAAATTGTAATTCGAAATCGAAACCGAATCGTGATGTGTATGGGATA 12 14769443 0.965589508 7 11 71 0.944444444 1.230448921 0.166666667 0.333333333 0.555555556 12 1 0 17 3L:14769426-14769492 3 3.5 2469 FBgn0036448 1896.993333 38.12666667 58.29333333 0.001845025 0.091799266 0.060041171 7 14 10.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 14776668 14776673 - 3L_14776668_14776673_- 1 1 1 0 bmm FBtr0075699|FBtr0300190 14776494|14776494 14777194|14776800 3L - 14776520 14776692 3'utr bmm FlyBase G36845.1 CTTAGTACGACCAACGTATGTACCTAACTTAACTTAGCCGTATGCTGCCATTGTATCATCGTCAGTTTGTAAGCGGCAATTAGCTAATAATTGCATTCTTGTTATTAGTCACCCTCACACGACTTGTATTACATCCAAATCCCCATCTGTGTTTAGCCTAAGTTGATAATGTA 613 14776674 0.975129032 22 604 3799 0.986149584 2.250420002 0.153739612 0.146818923 0.275623269 613 7 3 712 3L:14776520-14776692 6 bmm FBtr0075699|FBtr0300190 14776494|14776494 14777194|14776800 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L - 14776617 14776696 3'utr bmm FlyBase G27811.2 TAGTCTTAGTACGACCAACGTATGTACCTAACTTAACTTAGCCGTATGCTGCCATTGTATCATCGTCAGTTTGTAAGCGG 359 14776674 0.772875575 11 352 2146 0.987522282 2.26638851 0.156862745 0.378830084 0.602495544 359 5 2 554 3L:14776617-14776696 6 412 2470 FBgn0036449 694.9966667 36.28666667 55.66 0.592808599 11.3540327 7.402084082 1 1 1 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 3L 14799435 14799440 + 3L_14799435_14799440_+ 1 1 1 0 CG9425 FBtr0075693|FBtr0333074 14799234|14799234 14801089|14799948 3L + 14799412 14799476 3'utr CG9425 FlyBase G30341.1 ATGGGAAAAACGGAAGAGAAAACGAAAAAGAACTGCTTCTTAATTATAGTTGTCCCTATCCTAAT 40 14799449 0.985186695 7 38 306 0.957446809 1.653212514 0.29787234 0.125 0.255319149 40 2 0 45 3L:14799412-14799476 6 CG9425 FBtr0075693|FBtr0333074 14799234|14799234 14801089|14799948 GAAAAA 6mer3-8 dme-miR-980-5p 3L + 14799409 14799466 3'utr CG9425 FlyBase G22939.1 ACAATGGGAAAAACGGAAGAGAAAACGAAAAAGAACTGCTTCTTAATTATAGTTGTCC 20 14799449 0.982522232 5 19 141 1 1.462397998 0.275862069 0.25 0.482758621 20 0 0 29 3L:14799409-14799466 6 26 2471 FBgn0036451 1200.986667 17.94333333 27.59666667 0.021648866 1.44900613 0.942142771 -14 -14 -14 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 3L 14799528 14799533 + 3L_14799528_14799533_+ 1 1 1 0 CG9425 FBtr0075693|FBtr0333074 14799234|14799234 14801089|14799948 3L + 14799486 14799614 3'utr CG9425 FlyBase G30342.1 TCGTTTAAATTGCAAATAATTTTATTAATTACGGTAGTCTTAAGTTAAAAGTGTGAATTATTATAATTAATTAATAATATACAAACTTACCTATTTAGTTAATGTTTAGTGGTTACTAAAGCTCGCCCA 129 14799543 0.989361891 12 123 1182 0.963855422 1.726998728 0.024096386 0.224806202 0.397590361 129 4 2 160 3L:14799486-14799614 6 CG9425 FBtr0075693|FBtr0333074 14799234|14799234 14801089|14799948 AGTTAA 6mer3-8 dme-miR-999-3p 3L + 14799494 14799630 3'utr CG9425 FlyBase G22940.1 ATTGCAAATAATTTTATTAATTACGGTAGTCTTAAGTTAAAAGTGTGAATTATTATAATTAATTAATAATATACAAACTTACCTATTTAGTTAATGTTTAGTGGTTACTAAAGCTCGCCCAAATGCCGCAGCGGGGA 114 14799543 0.988519464 17 113 1038 0.993630573 2.193124598 0.006369427 0.280701754 0.477707006 114 1 0 156 3L:14799494-14799630 6 91.5 2472 FBgn0036451 1200.986667 17.94333333 27.59666667 0.076187357 5.099386959 3.315617828 -15 -15 -15 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 14800347 14800352 + 3L_14800347_14800352_+ 1 1 1 0 CG9425 FBtr0075693 14799234 14801089 3L + 14800322 14800387 3'utr CG9425 FlyBase G30348.1 ATTTAAATTTGTGCACGAGTTATTTGTTCCTTTGCCCATCCGAAATTGTCGATGCATGTGTAAATT 15 14800346 0.771435887 9 15 148 1 1.255272505 0.222222222 0.2 0.333333333 15 0 0 18 3L:14800322-14800387 6 CG9425 FBtr0075693 14799234 14801089 GTTCCT 6mer2-7 dme-miR-276a-3p 3L + 14800300 14800379 3'utr CG9425 FlyBase G22943.1 TATATATAATATGCATATAAATATTTAAATTTGTGCACGAGTTATTTGTTCCTTTGCCCATCCGAAATTGTCGATGCATG 11 14800346 0.989355944 7 11 108 1 1.176091259 0.266666667 0.272727273 0.466666667 11 0 0 15 3L:14800300-14800379 6 8 2473 FBgn0036451 1200.986667 17.94333333 27.59666667 0.00666119 0.44584804 0.289890083 1 1 1 0.01 dme-miR-8-3p 6mer2-7 AGTATT 3L 14800612 14800617 + 3L_14800612_14800617_+ 1 1 1 0 CG9425 FBtr0075693 14799234 14801089 3L + 14800587 14800638 3'utr CG9425 FlyBase G30350.1 TTAATCAATCTTTGAGTTTTATCGTAGTATTTTGGCTAGCGACTTGGATAGC 8 14800617 0.994434582 5 5 61 0.75 0.77815125 0.375 0 0 8 2 0 6 3L:14800587-14800638 6 CG9425 FBtr0075693 14799234 14801089 AGTATT 6mer2-7 dme-miR-8-3p 3L + 14800600 14800641 3'utr CG9425 FlyBase G22946.1 GAGTTTTATCGTAGTATTTTGGCTAGCGACTTGGATAGCGTA 8 14800618 0.685161862 3 7 76 0.8 1.079181246 0.333333333 0.625 0.8 8 3 0 12 3L:14800600-14800641 6 5.5 2474 FBgn0036451 1200.986667 17.94333333 27.59666667 0.004579568 0.306520528 0.199299432 -5 -6 -5.5 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG 3L 1491256 1491261 - 3L_1491256_1491261_- 1 1 1 0 CG12084 FBtr0332656 1490949 1491753 3L - 1491224 1491289 3'utr CG12084 FlyBase G33306.1 ACGATGCTCACTTAACCCCCCCACATTTGCTGTGCTTTCGCATCACGAACCCAAGTAGCTGCAAGT 21 1491263 0.98295709 5 21 157 1 1.361727836 0.086956522 0.095238095 0.173913043 21 0 0 23 3L:1491224-1491289 6 CG12084 FBtr0332656 1490949 1491753 GCTGTG 6mer2-7 dme-miR-1008-3p 3L - 1491214 1491289 3'utr CG12084 FlyBase G25197.1 ACGATGCTCACTTAACCCCCCCACATTTGCTGTGCTTTCGCATCACGAACCCAAGTAGCTGCAAGTTCAGGATCGG 7 1491263 0.968399461 5 7 34 1 1 0 0.285714286 0.5 7 0 0 10 3L:1491214-1491289 6 11 2475 FBgn0043458 1091.493333 38.07666667 58.14666667 0.010077936 0.288890834 0.189176794 2 2 2 0.01 dme-miR-277-3p 6mer3-8 TGCATT 3L 14991401 14991406 + 3L_14991401_14991406_+ 1 1 1 0 mnd FBtr0075626|FBtr0114529|FBtr0075627 14991215|14991215|14991215 14991667|14991667|14991667 3L + 14991256 14991581 3'utr mnd FlyBase G30373.2 TGTGGATGTATCGATCAACGCAACTATAGAAGGGAATATCTTGTAGTTAGGATAAGTCTCAATTTACCCCTAAGATAGGTTAGCAACGCGAAATTTTGAAAACCTACGCACAACATTACAAAAGTGTTATTGTAAATAACTCAAATGCATTCTGGTAGGGAAGTCCCTGCTTCAATTAATATTATTTGTTAGTCGTACTTTTAATGTATATTTCAAACCCAAAAAAAATGAGTTCCTCGTCGAAAGCAGAAGTACGCCTGTTATACAAAATGCGAACCAATTTTTACATATTATACAAGTAATTAGGAGCTTATTCAGTAAGTAAT 210 14991404 0.972122629 38 194 1265 0.933609959 1.507084478 0.232365145 0.123809524 0.236514523 210 10 6 225 3L:14991256-14991581 6 mnd FBtr0114529|FBtr0075627|FBtr0075626 14991215|14991215|14991215 14991667|14991667|14991667 TGCATT 6mer3-8 dme-miR-277-3p 3L + 14991250 14991428 3'utr mnd FlyBase G22958.1 GCCTTTTGTGGATGTATCGATCAACGCAACTATAGAAGGGAATATCTTGTAGTTAGGATAAGTCTCAATTTACCCCTAAGATAGGTTAGCAACGCGAAATTTTGAAAACCTACGCACAACATTACAAAAGTGTTATTGTAAATAACTCAAATGCATTCTGGTAGGGAAGTCCCTGCTTC 70 14991405 0.976540047 21 67 431 0.971428571 2.008600172 0.180952381 0.314285714 0.542857143 70 3 0 102 3L:14991250-14991428 6 42 2476 FBgn0002778 691.1866667 34.75 53.52333333 0.060765061 1.208633094 0.78470449 -3 -4 -3.5 0.01 dme-miR-276a-3p 7mer-m8 AGTTCCT 3L 14991486 14991492 + 3L_14991486_14991492_+ 0.631524679 0.631524679 0.631524679 0 mnd FBtr0075626|FBtr0114529|FBtr0075627 14991215|14991215|14991215 14991667|14991667|14991667 3L + 14991256 14991581 3'utr mnd FlyBase G30373.2 TGTGGATGTATCGATCAACGCAACTATAGAAGGGAATATCTTGTAGTTAGGATAAGTCTCAATTTACCCCTAAGATAGGTTAGCAACGCGAAATTTTGAAAACCTACGCACAACATTACAAAAGTGTTATTGTAAATAACTCAAATGCATTCTGGTAGGGAAGTCCCTGCTTCAATTAATATTATTTGTTAGTCGTACTTTTAATGTATATTTCAAACCCAAAAAAAATGAGTTCCTCGTCGAAAGCAGAAGTACGCCTGTTATACAAAATGCGAACCAATTTTTACATATTATACAAGTAATTAGGAGCTTATTCAGTAAGTAAT 210 14991485 0.972122629 38 194 1265 0.933609959 1.507084478 0.232365145 0.123809524 0.236514523 210 10 6 225 3L:14991256-14991581 7 mnd FBtr0114529|FBtr0075627|FBtr0075626 14991215|14991215|14991215 14991667|14991667|14991667 AGTTCCT 7mer-m8 dme-miR-276a-3p 3L + 14991470 14991564 3'utr mnd FlyBase G22959.1 AAACCCAAAAAAAATGAGTTCCTCGTCGAAAGCAGAAGTACGCCTGTTATACAAAATGCGAACCAATTTTTACATATTATACAAGTAATTAGGAG 30 14991485 0.969287592 13 29 163 0.954545455 1.62324929 0.159090909 0.3 0.522727273 30 2 0 42 3L:14991470-14991564 7 32 2477 FBgn0002778 691.1866667 34.75 53.52333333 0.046297189 0.920863309 0.597870088 1 1 1 0.01 dme-miR-1006-3p 7mer-m8 CGAATTT 3L 14991621 14991627 + 3L_14991621_14991627_+ 0.661614704 0.661614704 0.661614704 0 mnd FBtr0075626|FBtr0114529|FBtr0075627 14991215|14991215|14991215 14991667|14991667|14991667 3L + 14991593 14991645 3'utr mnd FlyBase G30374.1 ATGCAACTTTTTGCGAAATGTAAAAAATCGAATTTGTTTTGTATAAGAAAGTT 33 14991620 0.929422371 4 30 308 0.947368421 1.556302501 0.184210526 0.121212121 0.236842105 33 2 0 36 3L:14991593-14991645 7 mnd FBtr0114529|FBtr0075627|FBtr0075626 14991215|14991215|14991215 14991667|14991667|14991667 CGAATTT 7mer-m8 dme-miR-1006-3p 3L + 14991593 14991641 3'utr mnd FlyBase G22960.1 ATGCAACTTTTTGCGAAATGTAAAAAATCGAATTTGTTTTGTATAAGAA 12 14991620 0.986979778 3 11 96 1 1.230448921 0.294117647 0.25 0.470588235 12 0 0 17 3L:14991593-14991641 7 21 2478 FBgn0002778 691.1866667 34.75 53.52333333 0.030382531 0.604316547 0.392352245 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 15001485 15001490 - 3L_15001485_15001490_- 1 1 1 0 Reck FBtr0333876|FBtr0075671 15001236|15001236 15001821|15001821 3L - 15001477 15001522 3'utr Reck FlyBase G36875.1 TCTGGATCGTAAAAGTACAAAGAGATTGATGGACCAAAACTCGACA 70 15001493 0.881062089 5 67 197 0.964705882 1.913813852 0.070588235 0.171428571 0.317647059 70 3 0 82 3L:15001477-15001522 6 Reck FBtr0333876|FBtr0075671 15001236|15001236 15001821|15001821 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 15001478 15001526 3'utr Reck FlyBase G27836.1 AAAATCTGGATCGTAAAAGTACAAAGAGATTGATGGACCAAAACTCGAC 48 15001493 0.902513836 3 48 125 1 1.86332286 0.082191781 0.375 0.589041096 48 0 0 73 3L:15001478-15001526 6 55.5 2479 FBgn0036463 378 10.74666667 16.56333333 0.146825397 5.16439206 3.350774804 3 3 3 0.01 dme-bantam-3p 6mer3-8 TGATCT 3L 15001793 15001798 - 3L_15001793_15001798_- 1 1 1 0 Reck FBtr0333876|FBtr0075671 15001236|15001236 15001821|15001821 3L - 15001687 15001958 stop_codon Reck FlyBase G36876.1 CAACCAATCTAGCTCTATCCTGTTTGACAGTATCGCATCTACTAGAACCCACGCCAAATGGAGCTACATCTTATGGTCCCCACGCCATTTGGATACTCCCCTTACTTTTGTTAGTTTCTAGAGTAATCATAGCTTAAGATAGTCCTAGAAGGAGTGTGTATGATCTGACTCAATCAAGTGAATTCTTGGTGCCAATTAACCCGTTATTCTAAGGAGATGGAAAGTGCCTTCAACTGTAAGGAATTGACCCTCTGTACCATGTGATATTAGCT 499 15001773 0.998993863 52 457 3673 0.92092257 1.349471799 0.179571664 0.176352705 0.322899506 499 24 24 559 3L:15001687-15001958 6 Reck FBtr0333876|FBtr0075671 15001236|15001236 15001821|15001821 TGATCT 6mer3-8 dme-bantam-3p 3L - 15001687 15001834 stop_codon Reck FlyBase G27837.1 AATCATAGCTTAAGATAGTCCTAGAAGGAGTGTGTATGATCTGACTCAATCAAGTGAATTCTTGGTGCCAATTAACCCGTTATTCTAAGGAGATGGAAAGTGCCTTCAACTGTAAGGAATTGACCCTCTGTACCATGTGATATTAGCT 350 15001773 0.781999025 34 310 2550 0.877862595 0.990659974 0.185114504 0.365714286 0.576335878 350 18 46 460 3L:15001687-15001834 6 125.5 2480 FBgn0036463 378 10.74666667 16.56333333 0.332010582 11.6780397 7.576977259 -25 -25 -25 0.01 dme-miR-79-3p 8mer-A1 TAGCTTTA 3L 1503362 1503369 - 3L_1503362_1503369_- 0.625364009 0.625364009 0.625364009 0 cue FBtr0072706 1503224 1503826 3L - 1503313 1503407 3'utr cue FlyBase G33337.2 CGTCATGTTGAAATGAATGCAAGTCGCGCGACTGACATTAGCTTTAAAAACGGATTACGCGGCCGCAAGACCATTGCGATTGTGATGATTGCATC 780 1503370 0.786645013 13 768 4364 0.988184748 2.662757832 0.383458647 0.158974359 0.29538131 780 10 1 920 3L:1503313-1503407 8 cue FBtr0072706 1503224 1503826 TAGCTTTA 8mer-A1 dme-miR-79-3p 3L - 1503298 1503417 3'utr cue FlyBase G25215.1 ACTTTGAATACGTCATGTTGAAATGAATGCAAGTCGCGCGACTGACATTAGCTTTAAAAACGGATTACGCGGCCGCAAGACCATTGCGATTGTGATGATTGCATCCGGATCTGTTGTAAT 598 1503370 0.968722558 20 589 3253 0.988358556 2.92890769 0.339930151 0.339464883 0.54016298 598 10 0 849 3L:1503298-1503417 8 658.5 2481 FBgn0011204 1050.61 45.31 69.18333333 0.626778729 14.53321563 9.518188388 1 1 1 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3L 1503555 1503561 - 3L_1503555_1503561_- 0.808818836 0.808818836 0.808818836 0 cue FBtr0072706|FBtr0072706 1503224|1503224 1503826|1503826 3L - 1503543 1503730 3'utr cue FlyBase G33338.2 AAGCTGCTGCCCGCCCGGCCCTCGACCCCGTTAGCCGCCAAGGTGCTCGCCCAGGCAACCAGCAACTAGAAACCAATTACCAACCAGCCACAGCAATGTGCAACCAGCAACAGCAGCCTAATACTTAACACTCGCCTGGGACACTTAACACTCGCCAAACCAAACCATTTACTTAAGCCGAAGCAACA 128 1503563 0.840186522 20 119 458 0.939597315 1.544068044 0.073825503 0.140625 0.261744966 128 6 3 140 3L:1503543-1503730 7 cue FBtr0072706|FBtr0072706 1503224|1503224 1503826|1503826 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3L - 1503546 1503615 3'utr cue FlyBase G25217.1 GCCTAATACTTAACACTCGCCTGGGACACTTAACACTCGCCAAACCAAACCATTTACTTAAGCCGAAGCA 47 1503563 0.802760007 12 43 197 0.929577465 1.342422681 0.042253521 0.425531915 0.61971831 47 3 2 66 3L:1503546-1503615 7 42 2482 FBgn0011204 1050.61 45.31 69.18333333 0.039976775 0.926947694 0.607082631 2 2 2 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 1503773 1503779 - 3L_1503773_1503779_- 0.801970437 0.801970437 0.801970437 0 cue FBtr0072706|FBtr0072706|FBtr0072706 1503224|1503224|1503224 1503826|1503826|1503826 3L - 1503731 1503811 3'utr cue FlyBase G33339.1 CGGACATCCACCTGCGCCTCAAAACTGAACCTTGTGATAGTCGTCGTCGTCGAGTGCGGATTTGGTGTATTCGAGCTTGAA 607 1503780 0.795159161 16 570 4303 0.946478873 1.526339277 0.123943662 0.140032949 0.264788732 607 19 19 672 3L:1503731-1503811 7 cue FBtr0072706|FBtr0072706|FBtr0072706 1503224|1503224|1503224 1503826|1503826|1503826 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 1503745 1503867 stop_codon cue FlyBase G25219.1 AGAAGATACTCATCCACAACATGGAGGATGACCTGTACTAGGGCGCGACGGACGGACGGACATCCACCTGCGCCTCAAAACTGAACCTTGTGATAGTCGTCGTCGTCGAGTGCGGATTTGGTG 416 1503780 0.982078088 20 389 2872 0.93533123 1.411326857 0.140378549 0.360576923 0.58044164 416 19 22 593 3L:1503745-1503867 7 493 2483 FBgn0011204 1050.61 45.31 69.18333333 0.469251197 10.88060031 7.125993736 1 1 1 0.01 dme-miR-1012-3p 6mer2-7 TGACTA 3L 15066351 15066356 - 3L_15066351_15066356_- 1 1 1 0 cp309 FBtr0333940|FBtr0333944|FBtr0333947|FBtr0333945|FBtr0333939|FBtr0333946|FBtr0333943|FBtr0099993|FBtr0305979|FBtr0305977|FBtr0333942|FBtr0333941 15066239|15066079|15066239|15066239|15066239|15066239|15066239|15066239|15066239|15066239|15066239|15066239 15066671|15066671|15066671|15066671|15066671|15066671|15066671|15066671|15066671|15066671|15066671|15066671 3L - 15066275 15066436 3'utr cp309 FlyBase G36882.1 AAGTGTTATTTGTATTTACCGCCCAAATGTAGCCATAAGCATAATGCTAATCCATGTCCCAGTATTTTGATTGGTTCGACTGACTATTGGCTGACAAATCCCAGAGTCACTTACATATATTTAGTTTTATTTCATTTGGGTTCTGACTGTATAAGTTTCCTG 93 15066350 0.880939671 25 87 789 0.946428571 1.423245874 0.133928571 0.161290323 0.303571429 93 3 3 106 3L:15066275-15066436 6 cp309 FBtr0333941|FBtr0333942|FBtr0305977|FBtr0305979|FBtr0099993|FBtr0333943|FBtr0333947|FBtr0333946|FBtr0333939|FBtr0333945|FBtr0333944|FBtr0333940 15066239|15066239|15066239|15066239|15066239|15066239|15066239|15066239|15066239|15066239|15066079|15066239 15066671|15066671|15066671|15066671|15066671|15066671|15066671|15066671|15066671|15066671|15066671|15066671 TGACTA 6mer2-7 dme-miR-1012-3p 3L - 15066310 15066436 3'utr cp309 FlyBase G27843.1 AAGTGTTATTTGTATTTACCGCCCAAATGTAGCCATAAGCATAATGCTAATCCATGTCCCAGTATTTTGATTGGTTCGACTGACTATTGGCTGACAAATCCCAGAGTCACTTACATATATTTAGTTT 42 15066350 0.985488645 19 39 328 0.95 1.755874856 0.15 0.380952381 0.566666667 42 3 0 57 3L:15066310-15066436 6 21.5 2484 FBgn0086690 2713.58 47.46 72.97333333 0.007923113 0.453013064 0.294628175 -6 -6 -6 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 3L 15066536 15066541 - 3L_15066536_15066541_- 1 1 1 0 cp309 FBtr0333940|FBtr0333944|FBtr0333947|FBtr0333945|FBtr0333939|FBtr0333946|FBtr0333943|FBtr0099993|FBtr0305979|FBtr0305977|FBtr0333942|FBtr0333941 15066239|15066079|15066239|15066239|15066239|15066239|15066239|15066239|15066239|15066239|15066239|15066239 15066671|15066671|15066671|15066671|15066671|15066671|15066671|15066671|15066671|15066671|15066671|15066671 3L - 15066465 15066576 3'utr cp309 FlyBase G36883.1 AGCATCAAGGATGTTGGACAAGCGATCCATTTTAGAGTTAATCACCTGTACCATTTCCCCTCATTATTAGATCTTAAGCTGTTGTAACCTATTTTAAGCGTTCGCGCAACCA 34 15066530 0.988202686 12 34 303 1 1.531478917 0.058823529 0 0 34 0 0 34 3L:15066465-15066576 6 cp309 FBtr0333941|FBtr0333942|FBtr0305977|FBtr0305979|FBtr0099993|FBtr0333943|FBtr0333947|FBtr0333946|FBtr0333939|FBtr0333945|FBtr0333944|FBtr0333940 15066239|15066239|15066239|15066239|15066239|15066239|15066239|15066239|15066239|15066239|15066079|15066239 15066671|15066671|15066671|15066671|15066671|15066671|15066671|15066671|15066671|15066671|15066671|15066671 AGTTAA 6mer3-8 dme-miR-999-3p 3L - 15066497 15066548 3'utr cp309 FlyBase G27844.1 ATTTTAGAGTTAATCACCTGTACCATTTCCCCTCATTATTAGATCTTAAGCT 24 15066530 0.832012838 5 20 213 0.787878788 1.414973348 0.090909091 0.25 0.454545455 24 7 0 26 3L:15066497-15066548 6 21.5 2485 FBgn0086690 2713.58 47.46 72.97333333 0.007923113 0.453013064 0.294628175 -11 -11 -11 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3L 15090878 15090883 - 3L_15090878_15090883_- 0.999990205 1 0.999995102 6.93E-06 CG6945 FBtr0075657 15090821 15091353 3L - 15090868 15090924 5'utr CG6945 FlyBase G36900.1 AATATACCGATTGGATACTGATATATTCACCGAGTTTTCTTAAGACTAACTACCGAC 18 15090885 0.691128991 9 16 133 0.904761905 1.278753601 0.380952381 0.166666667 0.285714286 18 2 0 19 3L:15090868-15090924 6 CG6945 FBtr0075657 15090821 15091353 AAGACT 6mer3-8 dme-miR-14-3p 3L - 15090857 15090926 5'utr CG6945 FlyBase G27861.1 TGAATATACCGATTGGATACTGATATATTCACCGAGTTTTCTTAAGACTAACTACCGACAAGCAATAACA 7 15090885 0.979085478 6 7 53 1 1 0.3 0.142857143 0.4 7 0 0 10 3L:15090857-15090926 6 7 2486 FBgn0036476 404.2866667 17.14 26.23666667 0.017314447 0.4084014 0.266802185 2 2 2 0.01 dme-miR-1006-3p 7mer-m8 CGAATTT 3L 15091230 15091236 - 3L_15091230_15091236_- 0.661614704 0.661614704 0.661614704 0 CG6945 FBtr0075657 15090821 15091353 3L - 15091221 15091264 5'utr CG6945 FlyBase G36901.1 AAAGCAGCTCAAACTATTGGACTCCTTTCGAATTTTAAGTTCGT 19 15091247 0.753604077 4 19 137 1 1.342422681 0.045454545 0.157894737 0.272727273 19 0 0 22 3L:15091221-15091264 7 CG6945 FBtr0075657 15090821 15091353 CGAATTT 7mer-m8 dme-miR-1006-3p 3L - 15091231 15091263 5'utr CG6945 FlyBase G27862.1 AAGCAGCTCAAACTATTGGACTCCTTTCGAATT 14 15091247 0.746452802 3 13 93 0.9 1.255272505 0.1 0.428571429 0.6 14 2 0 18 3L:15091231-15091263 5 7 2487 FBgn0036476 404.2866667 17.14 26.23666667 0.017314447 0.4084014 0.266802185 11 11 11 0.01 dme-bantam-3p 8mer-A1 TGATCTCA 3L 15127543 15127550 + 3L_15127543_15127550_+ 0.631136385 0.631136385 0.631136385 0 Cep135 FBtr0333853 15127334 15128029 3L + 15127488 15127572 3'utr Cep135 FlyBase G30414.1 TGCGCGATGAGCTTCAGCAGAGCTTGGCCATTAATCAGGTCACCAACGAAACCACTGATCTCATGCTCGGGCGCTTGCACAATGA 109 15127551 0.95625757 7 107 502 0.983870968 1.785329835 0.274193548 0.128440367 0.233870968 109 1 1 122 3L:15127488-15127572 8 Cep135 FBtr0333853 15127334 15128029 TGATCTCA 8mer-A1 dme-bantam-3p 3L + 15127524 15127570 3'utr Cep135 FlyBase G22997.1 AGGTCACCAACGAAACCACTGATCTCATGCTCGGGCGCTTGCACAAT 68 15127551 0.703646431 4 67 324 0.990825688 1.73239376 0.211009174 0.411764706 0.633027523 68 0 1 108 3L:15127524-15127570 8 88 2488 FBgn0036480 383.3666667 13.55333333 20.77666667 0.229545257 6.492867683 4.235520616 -8 -8 -8 0.01 dme-bantam-3p 6mer3-8 TGATCT 3L 15131749 15131754 - 3L_15131749_15131754_- 1 1 1 0 CG12316 FBtr0075651|FBtr0075652 15131506|15131506 15131804|15131804 3L - 15131699 15131822 stop_codon CG12316 FlyBase G36906.1 TCGAAGGATTTAGTTTAGGATCTCCCCACACAGACCAGTTGTAGTTCCAGTTGCCGATCCAATCCCATTGATCTTGGCCTGCAATAGTATTTGTATTATTTTTTTGAAGAAACGTCTGTAAAAC 86 15131755 0.838501485 18 78 575 0.911764706 1.366422957 0.117647059 0.186046512 0.31372549 86 6 3 93 3L:15131699-15131822 6 CG12316 FBtr0075652|FBtr0075651 15131506|15131506 15131804|15131804 TGATCT 6mer3-8 dme-bantam-3p 3L - 15131699 15131812 stop_codon CG12316 FlyBase G27865.1 TAGTTTAGGATCTCCCCACACAGACCAGTTGTAGTTCCAGTTGCCGATCCAATCCCATTGATCTTGGCCTGCAATAGTATTTGTATTATTTTTTTGAAGAAACGTCTGTAAAAC 54 15131755 0.846206634 15 45 383 0.891566265 1.392110465 0.156626506 0.425925926 0.626506024 54 7 2 74 3L:15131699-15131812 6 46 2489 FBgn0036483 307.04 9.166666667 14.16333333 0.149817613 5.018181818 3.247823017 1 1 1 0.01 dme-miR-932-5p 6mer3-8 GGAATT 3L 15137796 15137801 - 3L_15137796_15137801_- 0.591720794 0.591720802 0.591720798 0 Pdi FBtr0075648|FBtr0346644 15137736|15137736 15138187|15138187 3L - 15137735 15137808 3'utr Pdi FlyBase G36916.1 CTATTTTGGAATTTTTAGAATCATTGAAAGAACTGATTAAGAACGTAACAAATAAAGTTGGTAACAACATTAAA 188 15137785 0.971375751 10 182 1052 0.96728972 1.838849091 0.065420561 0.122340426 0.228971963 188 5 2 207 3L:15137735-15137808 6 Pdi FBtr0075648|FBtr0346644 15137736|15137736 15138187|15138187 GGAATT 6mer3-8 dme-miR-932-5p 3L - 15137747 15137803 3'utr Pdi FlyBase G27873.1 TTGGAATTTTTAGAATCATTGAAAGAACTGATTAAGAACGTAACAAATAAAGTTGGT 138 15137785 0.781882829 7 132 794 0.960784314 1.991226076 0.053921569 0.347826087 0.558823529 138 7 1 196 3L:15137747-15137803 6 14 2490 FBgn0014002 7431.146667 432.6266667 661.87 0.001883962 0.032360465 0.02115219 -16 -16 -16 0.01 dme-miR-305-5p 6mer3-8 AGTACA 3L 15137923 15137928 - 3L_15137923_15137928_- 1 1 1 0 Pdi FBtr0075648|FBtr0346644 15137736|15137736 15138187|15138187 3L - 15137867 15137951 3'utr Pdi FlyBase G36917.1 ATTCGCATACTTCCGTTGTATGTAGTACATTTGCGACGCAGATAACGATGATTACACGTCCGCTGTTTGCATGAACTTAAAATTC 48 15137900 0.769372962 15 48 348 1 1.73239376 0.148148148 0.125 0.222222222 48 0 0 54 3L:15137867-15137951 6 Pdi FBtr0075648|FBtr0346644 15137736|15137736 15138187|15138187 AGTACA 6mer3-8 dme-miR-305-5p 3L - 15137867 15137942 3'utr Pdi FlyBase G27874.1 CTTCCGTTGTATGTAGTACATTTGCGACGCAGATAACGATGATTACACGTCCGCTGTTTGCATGAACTTAAAATTC 30 15137900 0.720167176 12 29 208 0.916666667 1.643452676 0.270833333 0.466666667 0.666666667 30 4 0 44 3L:15137867-15137942 6 16.5 2491 FBgn0014002 7431.146667 432.6266667 661.87 0.002220384 0.038139119 0.024929367 -28 -28 -28 0.01 dme-miR-282-5p 6mer3-8 AGAGGC 3L 15154584 15154589 - 3L_15154584_15154589_- 0.999955643 0.999955643 0.999955643 0 Msh6 FBtr0075646 15154231 15154664 3L - 15154444 15154614 3'utr Msh6 FlyBase G36934.1 AAACATGTTTACTTATGATTCGCCAAGAGGCAGCTATGCTGGAATTTGATGTATACGAAGCTTTTTAAGACTTTTTCACCATTTCAGTATGCATTTTTTTTGTAGTTTTTATAAGGAATTTGAATCAAAACCTGTGCCATTCTCAACATTCTCAATTAAGCAAAATGGAAC 117 15154578 0.980341138 26 103 853 0.881118881 2.100370545 0.083916084 0.205128205 0.34965035 117 17 0 126 3L:15154444-15154614 6 Msh6 FBtr0075646 15154231 15154664 AGAGGC 6mer3-8 dme-miR-282-5p 3L - 15154467 15154610 3'utr Msh6 FlyBase G27890.1 ATGTTTACTTATGATTCGCCAAGAGGCAGCTATGCTGGAATTTGATGTATACGAAGCTTTTTAAGACTTTTTCACCATTTCAGTATGCATTTTTTTTGTAGTTTTTATAAGGAATTTGAATCAAAACCTGTGCCATTCTCAACA 90 15154596 0.887134801 20 86 592 0.944444444 2.075546961 0.126984127 0.3 0.5 90 7 0 119 3L:15154467-15154610 6 50.5 2492 FBgn0036486 1407.773333 41.68666667 63.93666667 0.035872252 1.211418519 0.789844117 -11 7 -2 0.01 dme-miR-282-5p 7mer-A1 GAGGCTA 3L 15154638 15154644 - 3L_15154638_15154644_- 0.823349562 0.823349562 0.823349562 0 Msh6 FBtr0075646 15154231 15154664 3L - 15154629 15154666 stop_codon Msh6 FlyBase G36935.1 AGGGTGCAGAAGCTCCAAAGTTGAGGCTACCAGACACC 46 15154645 0.722163575 2 44 143 0.945454545 1.414973348 0.109090909 0.173913043 0.309090909 46 2 1 52 3L:15154629-15154666 7 Msh6 FBtr0075646 15154231 15154664 GAGGCTA 7mer-A1 dme-miR-282-5p 3L - 15154621 15154657 3'utr Msh6 FlyBase G27891.1 AAGCTCCAAAGTTGAGGCTACCAGACACCATTTCCCA 20 15154646 0.906806879 2 20 63 1 1.568201724 0 0.55 0.756756757 20 0 0 37 3L:15154621-15154657 7 33 2493 FBgn0036486 1407.773333 41.68666667 63.93666667 0.023441274 0.791620022 0.516135759 1 2 1.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 3L 1522942 1522948 + 3L_1522942_1522948_+ 0.671796082 0.671796082 0.671796082 0 Psa FBtr0072700|FBtr0072697|FBtr0072701|FBtr0306557|FBtr0072702|FBtr0072699|FBtr0072698|FBtr0333395 1522918|1522918|1522918|1522918|1522918|1522918|1522918|1522918 1523380|1523380|1523380|1523380|1523380|1523380|1523380|1523380 3L + 1522905 1523042 stop_codon Psa FlyBase G27115.1 AGGGATGACCAATAAACGTTATTGCGCTCGCCAGCATACCAAAGCATTTAACAACAATCACCAGCAGTGTAACCACAGCAACAGCAACGCCAACGCAGCACCATCATCAGCACCAGTAACCCGTAACCAGGTCATCGT 35 1522941 0.961506541 9 34 124 1 1.579783597 0.131578947 0.057142857 0.131578947 35 0 0 38 3L:1522905-1523042 7 Psa FBtr0072698|FBtr0333395|FBtr0072702|FBtr0072699|FBtr0072701|FBtr0306557|FBtr0072700|FBtr0072697 1522918|1522918|1522918|1522918|1522918|1522918|1522918|1522918 1523380|1523380|1523380|1523380|1523380|1523380|1523380|1523380 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 1522918 1522958 stop_codon Psa FlyBase G20523.1 AAACGTTATTGCGCTCGCCAGCATACCAAAGCATTTAACAA 8 1522941 0.925001087 3 6 27 0.692307692 0.954242509 0 0.625 0.769230769 8 4 0 9 3L:1522918-1522958 7 11.5 2494 FBgn0261243 1862.84 60.46333333 92.53333333 0.00617337 0.190197916 0.124279539 1 1 1 0.01 dme-miR-79-3p 8mer-A1 TAGCTTTA 3L 1523143 1523150 + 3L_1523143_1523150_+ 0.625364009 0.625364009 0.625364009 0 Psa FBtr0072700|FBtr0072697|FBtr0072701|FBtr0306557|FBtr0072702|FBtr0072699|FBtr0072698|FBtr0333395 1522918|1522918|1522918|1522918|1522918|1522918|1522918|1522918 1523380|1523380|1523380|1523380|1523380|1523380|1523380|1523380 3L + 1523114 1523222 3'utr Psa FlyBase G27116.1 GTACTCCTAAAGATGAGAGCCAAATAGGTTAGCTTTAGTCAAGGATCCACCTACAGCCACTGCTCCAACCGGGCGTGCTTACATATATCGATTGACTACTCGCCCCAGC 40 1523142 0.948908266 10 40 215 1 1.69019608 0.285714286 0.15 0.306122449 40 0 0 49 3L:1523114-1523222 8 Psa FBtr0072698|FBtr0333395|FBtr0072702|FBtr0072699|FBtr0072701|FBtr0306557|FBtr0072700|FBtr0072697 1522918|1522918|1522918|1522918|1522918|1522918|1522918|1522918 1523380|1523380|1523380|1523380|1523380|1523380|1523380|1523380 TAGCTTTA 8mer-A1 dme-miR-79-3p 3L + 1523106 1523170 3'utr Psa FlyBase G20524.1 TGGCAAACGTACTCCTAAAGATGAGAGCCAAATAGGTTAGCTTTAGTCAAGGATCCACCTACAGC 12 1523142 0.964790097 4 12 64 1 1.278753601 0.052631579 0.5 0.684210526 12 0 0 19 3L:1523106-1523170 8 13.5 2495 FBgn0261243 1862.84 60.46333333 92.53333333 0.007246999 0.223275815 0.145893372 1 1 1 0.01 dme-miR-1012-3p 7mer-m8 TTGACTA 3L 1523205 1523211 + 3L_1523205_1523211_+ 0.60594774 0.631518364 0.618733052 0.018081215 Psa FBtr0072700|FBtr0072697|FBtr0072701|FBtr0306557|FBtr0072702|FBtr0072699|FBtr0072698|FBtr0333395 1522918|1522918|1522918|1522918|1522918|1522918|1522918|1522918 1523380|1523380|1523380|1523380|1523380|1523380|1523380|1523380 3L + 1523114 1523222 3'utr Psa FlyBase G27116.1 GTACTCCTAAAGATGAGAGCCAAATAGGTTAGCTTTAGTCAAGGATCCACCTACAGCCACTGCTCCAACCGGGCGTGCTTACATATATCGATTGACTACTCGCCCCAGC 40 1523205 0.948908266 10 40 215 1 1.69019608 0.285714286 0.15 0.306122449 40 0 0 49 3L:1523114-1523222 7 Psa FBtr0072698|FBtr0333395|FBtr0072702|FBtr0072699|FBtr0072701|FBtr0306557|FBtr0072700|FBtr0072697 1522918|1522918|1522918|1522918|1522918|1522918|1522918|1522918 1523380|1523380|1523380|1523380|1523380|1523380|1523380|1523380 TTGACTA 7mer-m8 dme-miR-1012-3p 3L + 1523173 1523223 3'utr Psa FlyBase G20525.1 CTGCTCCAACCGGGCGTGCTTACATATATCGATTGACTACTCGCCCCAGCA 13 1523205 0.968175557 5 13 76 1 1.397940009 0.16 0.461538462 0.72 13 0 0 25 3L:1523173-1523223 7 17 2496 FBgn0261243 1862.84 60.46333333 92.53333333 0.009125851 0.281162137 0.183717579 0 0 0 0.01 dme-miR-79-3p 8mer-A1 TAGCTTTA 3L 15240169 15240176 + 3L_15240169_15240176_+ 0.625364009 0.625364009 0.625364009 0 Tollo FBtr0075607 15240160 15242832 3L + 15240144 15240185 stop_codon Tollo FlyBase G30434.1 AGAAATCTGCACATGTGAGTGGGGTTAGCTTTAAGCAGAGGG 18 15240163 0.81852234 4 18 116 1 1.278753601 0.368421053 0.055555556 0.105263158 18 0 0 19 3L:15240144-15240185 8 Tollo FBtr0075607 15240160 15242832 TAGCTTTA 8mer-A1 dme-miR-79-3p 3L + 15240142 15240174 stop_codon Tollo FlyBase G23011.1 CTAGAAATCTGCACATGTGAGTGGGGTTAGCTT 18 15240163 0.825695651 3 17 92 0.952380952 1 0.333333333 0.111111111 0.238095238 18 0 1 20 3L:15240142-15240174 6 14 2497 FBgn0029114 1018.113333 17.04 26.18666667 0.013750925 0.821596244 0.534623218 6 6 6 0.01 dme-miR-14-3p 6mer2-7 AGACTG 3L 15242280 15242285 + 3L_15242280_15242285_+ 1 1 1 0 Tollo FBtr0075607 15240160 15242832 3L + 15242260 15242297 3'utr Tollo FlyBase G30437.1 TAGAAGGATTCACTTGGTTTAGACTGTAAAGAGTTAAA 15 15242278 0.683931682 5 14 114 0.944444444 1.230448921 0.166666667 0.2 0.333333333 15 1 0 17 3L:15242260-15242297 6 Tollo FBtr0075607 15240160 15242832 AGACTG 6mer2-7 dme-miR-14-3p 3L + 15242261 15242298 3'utr Tollo FlyBase G23014.1 AGAAGGATTCACTTGGTTTAGACTGTAAAGAGTTAAAT 13 15242278 0.656065455 5 12 93 0.916666667 1.342422681 0.291666667 0.615384615 0.791666667 13 2 0 22 3L:15242261-15242298 6 14 2498 FBgn0029114 1018.113333 17.04 26.18666667 0.013750925 0.821596244 0.534623218 2 2 2 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 3L 15242554 15242559 + 3L_15242554_15242559_+ 1 1 1 0 Tollo FBtr0075607 15240160 15242832 3L + 15242541 15242583 3'utr Tollo FlyBase G30440.1 AAAAGAAACAATCGAAAAAAGGACTGTATGCACTAAAACGATA 21 15242567 0.88946336 2 20 63 1 1.491361694 0.258064516 0.428571429 0.612903226 21 0 0 31 3L:15242541-15242583 6 Tollo FBtr0075607 15240160 15242832 GAAAAA 6mer3-8 dme-miR-980-5p 3L + 15242549 15242582 3'utr Tollo FlyBase G23016.1 CAATCGAAAAAAGGACTGTATGCACTAAAACGAT 12 15242567 0.634449395 3 12 39 1 1.230448921 0.352941176 0.333333333 0.529411765 12 0 0 17 3L:15242549-15242582 6 16 2499 FBgn0029114 1018.113333 17.04 26.18666667 0.015715343 0.938967136 0.610997963 -13 -13 -13 0.01 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 1535130 1535136 - 3L_1535130_1535136_- 0.823349562 0.823349562 0.823349562 0 CG12091 FBtr0333400|FBtr0072831 1534927|1535010 1535595|1535595 3L - 1535077 1535180 3'utr CG12091 FlyBase G33360.1 TGGAAGCTGGATGGATGGTGGACCCGGAATGGAGCGAGTCGAGTGCAGCTATCTGACTGAGGACGGAGGATTACCCATTTACGCGGGCGAACGAACTGTCTTTA 30 1535129 0.777278922 13 24 135 0.846153846 0.916453949 0.307692308 0.266666667 0.435897436 30 3 3 33 3L:1535077-1535180 7 CG12091 FBtr0072831|FBtr0333400 1535010|1534927 1535595|1535595 GCAGCTA 7mer-A1 dme-miR-980-3p 3L - 1535035 1535182 3'utr CG12091 FlyBase G25231.1 GATGGAAGCTGGATGGATGGTGGACCCGGAATGGAGCGAGTCGAGTGCAGCTATCTGACTGAGGACGGAGGATTACCCATTTACGCGGGCGAACGAACTGTCTTTAAACAATTTTTGTCGAAATGTACTCACTGATATTTGCGACCCA 36 1535137 0.92588976 13 31 162 0.854166667 1.612783857 0.416666667 0.222222222 0.416666667 36 7 0 41 3L:1535035-1535182 7 20 2500 FBgn0035228 678.3333333 45.40666667 69.66333333 0.029484029 0.440463955 0.287095076 -7 1 -3 0.01 dme-bantam-3p 6mer2-7 GATCTC 3L 1535285 1535290 - 3L_1535285_1535290_- 1 1 1 0 CG12091 FBtr0333400|FBtr0072831 1534927|1535010 1535595|1535595 3L - 1535253 1535312 3'utr CG12091 FlyBase G33361.1 CGAATTATCTGCCCGATCTGGCGATCTCTGTCGTCAGTGGCGTTCTAATCACCACAAACA 24 1535284 0.878644258 6 24 174 1 1.491361694 0.419354839 0.208333333 0.387096774 24 0 0 31 3L:1535253-1535312 6 CG12091 FBtr0072831|FBtr0333400 1535010|1534927 1535595|1535595 GATCTC 6mer2-7 dme-bantam-3p 3L - 1535267 1535321 3'utr CG12091 FlyBase G25232.1 TAGAGAATGCGAATTATCTGCCCGATCTGGCGATCTCTGTCGTCAGTGGCGTTCT 23 1535284 0.741501405 4 19 157 0.916666667 1.041392685 0.208333333 0.608695652 0.8125 23 1 3 44 3L:1535267-1535321 6 20 2501 FBgn0035228 678.3333333 45.40666667 69.66333333 0.029484029 0.440463955 0.287095076 -6 -6 -6 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3L 1535463 1535469 - 3L_1535463_1535469_- 0.521223734 0.521182816 0.521203275 2.89E-05 CG12091 FBtr0333400|FBtr0072831 1534927|1535010 1535595|1535595 3L - 1535415 1535624 stop_codon CG12091 FlyBase G33363.1 CCGTTGTCCTGGCCACCGTGGCGATGTGAGAGTGGTGCTCCAGCCCATCCTCCCTAGTGATTAACGTTTACTTGTAGTCCGTACGTGTTTAGTTAGCTTTAGGAGCCAGTTTCGTGGTTCTGTCTACCGTTTAAGCTGCATGTTGAGATTGAGATTGTGATTGACGAGGACGACGACCCTTTGACCCTTTGCATTGTTAGTTACATATAT 459 1535470 0.817845686 34 445 3211 0.969811321 1.932811869 0.581132075 0.139433551 0.254716981 459 11 5 514 3L:1535415-1535624 7 CG12091 FBtr0072831|FBtr0333400 1535010|1534927 1535595|1535595 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 1535423 1535583 3'utr CG12091 FlyBase G25234.1 AGCCCATCCTCCCTAGTGATTAACGTTTACTTGTAGTCCGTACGTGTTTAGTTAGCTTTAGGAGCCAGTTTCGTGGTTCTGTCTACCGTTTAAGCTGCATGTTGAGATTGAGATTGTGATTGACGAGGACGACGACCCTTTGACCCTTTGCATTGTTAGTT 352 1535470 0.805250796 24 351 2442 0.998123827 2.424881637 0.544090056 0.352272727 0.572232645 352 0 1 532 3L:1535423-1535583 7 225 2502 FBgn0035228 678.3333333 45.40666667 69.66333333 0.331695332 4.955219498 3.229819609 1 1 1 0.01 dme-miR-79-3p 8mer-A1 TAGCTTTA 3L 1535524 1535531 - 3L_1535524_1535531_- 0.625364009 0.625364009 0.625364009 0 CG12091 FBtr0333400|FBtr0072831 1534927|1535010 1535595|1535595 3L - 1535415 1535624 stop_codon CG12091 FlyBase G33363.1 CCGTTGTCCTGGCCACCGTGGCGATGTGAGAGTGGTGCTCCAGCCCATCCTCCCTAGTGATTAACGTTTACTTGTAGTCCGTACGTGTTTAGTTAGCTTTAGGAGCCAGTTTCGTGGTTCTGTCTACCGTTTAAGCTGCATGTTGAGATTGAGATTGTGATTGACGAGGACGACGACCCTTTGACCCTTTGCATTGTTAGTTACATATAT 459 1535532 0.817845686 34 445 3211 0.969811321 1.932811869 0.581132075 0.139433551 0.254716981 459 11 5 514 3L:1535415-1535624 8 CG12091 FBtr0072831|FBtr0333400 1535010|1534927 1535595|1535595 TAGCTTTA 8mer-A1 dme-miR-79-3p 3L - 1535423 1535583 3'utr CG12091 FlyBase G25234.1 AGCCCATCCTCCCTAGTGATTAACGTTTACTTGTAGTCCGTACGTGTTTAGTTAGCTTTAGGAGCCAGTTTCGTGGTTCTGTCTACCGTTTAAGCTGCATGTTGAGATTGAGATTGTGATTGACGAGGACGACGACCCTTTGACCCTTTGCATTGTTAGTT 352 1535532 0.805250796 24 351 2442 0.998123827 2.424881637 0.544090056 0.352272727 0.572232645 352 0 1 532 3L:1535423-1535583 8 128 2503 FBgn0035228 678.3333333 45.40666667 69.66333333 0.188697789 2.818969314 1.837408488 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 3L 1544622 1544629 + 3L_1544622_1544629_+ 0.64356572 0.64356572 0.64356572 0 CG7852 FBtr0072736|FBtr0072737|FBtr0072735 1544074|1541507|1544074 1544823|1544823|1544823 3L + 1544600 1544641 3'utr CG7852 FlyBase G27133.1 AGCTTTTAGTTTAGTTGATTTTACCAAAGAATCTTTGTTTTT 20 1544621 0.838294311 4 19 209 0.954545455 1.021189299 0 0.1 0.181818182 20 0 1 21 3L:1544600-1544641 8 CG7852 FBtr0072737|FBtr0072735|FBtr0072736 1541507|1544074|1544074 1544823|1544823|1544823 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 1544612 1544634 3'utr CG7852 FlyBase G20537.1 AGTTGATTTTACCAAAGAATCTT 5 1544621 0.724904695 3 5 28 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3L:1544612-1544634 8 12 2504 FBgn0035229 480 10.39 15.81 0.025 1.154956689 0.759013283 1 1 1 0.01 dme-miR-965-3p 6mer2-7 ACGCTT 3L 15503429 15503434 + 3L_15503429_15503434_+ 0.999999994 0.999755622 0.999877808 0.000172817 CG7272 FBtr0075548 15503417 15503769 3L + 15503413 15503479 stop_codon CG7272 FlyBase G30466.1 AAATAATTGAAATCGAACGCTTTACCTAGAAAAAAGGACAAATAATGGGTTGTTGCAACAACATTAC 34 15503435 0.942142138 13 28 157 0.860465116 1.091080469 0.162790698 0.264705882 0.418604651 34 4 2 37 3L:15503413-15503479 6 CG7272 FBtr0075548 15503417 15503769 ACGCTT 6mer2-7 dme-miR-965-3p 3L + 15503417 15503473 stop_codon CG7272 FlyBase G23035.1 AATTGAAATCGAACGCTTTACCTAGAAAAAAGGACAAATAATGGGTTGTTGCAACAA 20 15503434 0.723834527 8 17 93 0.884615385 1.361727836 0.115384615 0.2 0.384615385 20 3 0 23 3L:15503417-15503473 6 16.5 2505 FBgn0036501 774.8233333 80.60666667 124.19 0.021295177 0.204697709 0.132860939 -6 -5 -5.5 0.01 dme-miR-307a-3p 6mer3-8 GGTTGT 3L 15503460 15503465 + 3L_15503460_15503465_+ 1 1 1 0 CG7272 FBtr0075548 15503417 15503769 3L + 15503413 15503479 stop_codon CG7272 FlyBase G30466.1 AAATAATTGAAATCGAACGCTTTACCTAGAAAAAAGGACAAATAATGGGTTGTTGCAACAACATTAC 34 15503435 0.942142138 13 28 157 0.860465116 1.091080469 0.162790698 0.264705882 0.418604651 34 4 2 37 3L:15503413-15503479 6 CG7272 FBtr0075548 15503417 15503769 GGTTGT 6mer3-8 dme-miR-307a-3p 3L + 15503417 15503473 stop_codon CG7272 FlyBase G23035.1 AATTGAAATCGAACGCTTTACCTAGAAAAAAGGACAAATAATGGGTTGTTGCAACAA 20 15503463 0.723834527 8 17 93 0.884615385 1.361727836 0.115384615 0.2 0.384615385 20 3 0 23 3L:15503417-15503473 6 10 2506 FBgn0036501 774.8233333 80.60666667 124.19 0.012906168 0.124059218 0.080521781 25 -3 11 0.01 dme-miR-190-5p 6mer3-8 ACATAT 3L 15503746 15503751 - 3L_15503746_15503751_- 1 1 1 0 CG7857 FBtr0075605 15503598 15503813 3L - 15503745 15503777 3'utr CG7857 FlyBase G36953.1 TCGATTTTGTAACAGATTGTTTTATTACATATT 9 15503760 0.813266715 2 7 94 0.909090909 1 0.272727273 0.222222222 0.363636364 9 1 0 10 3L:15503745-15503777 6 CG7857 FBtr0075605 15503598 15503813 ACATAT 6mer3-8 dme-miR-190-5p 3L - 15503725 15503772 3'utr CG7857 FlyBase G27903.1 TTTGTAACAGATTGTTTTATTACATATTATGTTGACTTTATAAATACG 6 15503761 0.996685333 4 5 75 0.9 0.954242509 0 0.333333333 0.6 6 1 0 9 3L:15503725-15503772 6 4.5 2507 FBgn0026738 329.6833333 33.33333333 51.54 0.013649462 0.135 0.087310827 9 10 9.5 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 15510691 15510696 + 3L_15510691_15510696_+ 1 1 1 0 gdl-ORF39 FBtr0091756 15509667 15510837 3L + 15510671 15510706 3'utr gdl-ORF39 FlyBase G30469.1 AAGGAGATAAAAATACAAATGTTCCTGTTGGACTTC 9 15510690 0.971506622 3 9 62 1 1.204119983 0.5625 0.444444444 0.6875 9 0 0 16 3L:15510671-15510706 6 gdl-ORF39 FBtr0091756 15509667 15510837 GTTCCT 6mer2-7 dme-miR-276a-3p 3L + 15510672 15510705 3'utr gdl-ORF39 FlyBase G23037.1 AGGAGATAAAAATACAAATGTTCCTGTTGGACTT 6 15510690 0.963257686 3 6 40 1 1.041392685 0.818181818 0.666666667 0.818181818 6 0 0 11 3L:15510672-15510705 6 7.5 2508 FBgn0028377 16.80333333 2.22 3.413333333 0.446340012 3.378378378 2.197265625 1 1 1 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 3L 15510787 15510792 + 3L_15510787_15510792_+ 1 1 1 0 gdl-ORF39 FBtr0091756 15509667 15510837 3L + 15510737 15510816 3'utr gdl-ORF39 FlyBase G30470.1 CCCGGCAAATAACAGTTAGTCCACAATCCGGAGAACACAAAAGACTGCACTTGACTTGTTCAAATTAGAATATTAAAGGC 24 15510792 0.986692301 9 22 184 0.888888889 0.903089987 0.222222222 0.125 0.222222222 24 1 2 24 3L:15510737-15510816 6 gdl-ORF39 FBtr0091756 15509667 15510837 TTGACT 6mer3-8 dme-miR-1012-3p 3L + 15510753 15510815 3'utr gdl-ORF39 FlyBase G23038.1 TAGTCCACAATCCGGAGAACACAAAAGACTGCACTTGACTTGTTCAAATTAGAATATTAAAGG 20 15510793 0.989813305 6 17 164 0.888888889 1.204119983 0.194444444 0.45 0.694444444 20 3 1 32 3L:15510753-15510815 6 20 2509 FBgn0028377 16.80333333 2.22 3.413333333 1.190240032 9.009009009 5.859375 -5 -6 -5.5 0.01 dme-miR-980-5p 7mer-A1 AAAAACA 3L 15513107 15513113 + 3L_15513107_15513113_+ 0.782911824 0.782911824 0.782911824 0 Eip71CD FBtr0303531|FBtr0075553|FBtr0330176|FBtr0330177|FBtr0075554|FBtr0075552 15513029|15513029|15513029|15513074|15513029|15512368 15513202|15513202|15513202|15513202|15513202|15513202 3L + 15513107 15513142 3'utr Eip71CD FlyBase G30474.1 AAAAACAGATTGTGTATTACGTAGACTTAGAAACGT 30 15513117 0.851702207 4 27 222 0.882352941 1.477121255 0.264705882 0.133333333 0.235294118 30 4 0 30 3L:15513107-15513142 6 Eip71CD FBtr0330177|FBtr0330176|FBtr0075553|FBtr0303531|FBtr0075552|FBtr0075554 15513074|15513029|15513029|15513029|15512368|15513029 15513202|15513202|15513202|15513202|15513202|15513202 AAAAACA 7mer-A1 dme-miR-980-5p 3L + 15513107 15513143 3'utr Eip71CD FlyBase G23041.1 AAAAACAGATTGTGTATTACGTAGACTTAGAAACGTA 36 15513117 0.838541879 3 31 269 0.838709677 1.716003344 0.193548387 0.527777778 0.725806452 36 10 0 52 3L:15513107-15513143 6 26.5 2510 FBgn0000565 255.6666667 32.52666667 49.39333333 0.103650587 0.81471613 0.53650965 -10 -10 -10 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3L 1552936 1552941 + 3L_1552936_1552941_+ 1 1 1 0 Cct1 FBtr0072739|FBtr0333396|FBtr0345365|FBtr0072741|FBtr0072740|FBtr0072738 1552625|1552625|1552625|1552625|1552625|1552625 1553236|1553236|1553504|1553236|1553236|1553236 3L + 1552809 1553041 3'utr Cct1 FlyBase G27145.1 AGTTGGCACTCGTTCTCCTCCTGCCTCAACTCCACCTGCCCATCTCCATCTGTGAGAATCGAGGGAATCCTGTAGCTAATTTAGCTGTGTGTGTGTGTGTGTGGGACAAGCAACCACCAACGCGGAAAAGACTCATTTTTGTATTAGGCACTCGACGGACTGTGCACGAAATCAATCGGCAGTGGCGGCAGATTCAGGTGCCGAAAATATCTAGAAATATTTATATTAAATTA 153 1552945 0.982640827 29 134 1011 0.897142857 1.292809665 0.2 0.124183007 0.234285714 153 11 7 157 3L:1552809-1553041 6 Cct1 FBtr0072740|FBtr0072738|FBtr0072739|FBtr0333396|FBtr0345365|FBtr0072741 1552625|1552625|1552625|1552625|1552625|1552625 1553236|1553236|1553236|1553236|1553504|1553236 AAGACT 6mer3-8 dme-miR-14-3p 3L + 1552810 1552982 3'utr Cct1 FlyBase G20548.1 GTTGGCACTCGTTCTCCTCCTGCCTCAACTCCACCTGCCCATCTCCATCTGTGAGAATCGAGGGAATCCTGTAGCTAATTTAGCTGTGTGTGTGTGTGTGTGGGACAAGCAACCACCAACGCGGAAAAGACTCATTTTTGTATTAGGCACTCGACGGACTGTGCACGAAATCA 103 1552945 0.969997818 21 91 580 0.866197183 1.48784512 0.253521127 0.300970874 0.492957746 103 16 3 123 3L:1552810-1552982 6 48.5 2511 FBgn0041342 2223.53 107.32 164.7166667 0.021812164 0.451919493 0.294445007 -9 -9 -9 0.01 dme-miR-2b-2-5p 7mer-A1 TGAAGAA 3L 15551449 15551455 + 3L_15551449_15551455_+ 0.823349562 0.823349551 0.823349557 0 CrebA FBtr0075558|FBtr0075557 15551273|15551273 15553214|15551905 3L + 15551421 15551454 3'utr CrebA FlyBase G30489.1 GTTTCGATTTAATCAGTCTGGGAGTTTGTGAAGA 10 15551433 0.772231358 5 10 78 1 1.079181246 0.5 0.2 0.333333333 10 0 0 12 3L:15551421-15551454 6 CrebA FBtr0075557|FBtr0075558 15551273|15551273 15551905|15553214 TGAAGAA 7mer-A1 dme-miR-2b-2-5p 3L + 15551426 15551489 3'utr CrebA FlyBase G23059.1 GATTTAATCAGTCTGGGAGTTTGTGAAGAATTTATGCGACGAGGAAACTTTAATGAATTTTTTG 12 15551447 0.94822406 8 10 82 0.95 1.278753601 0.25 0.333333333 0.6 12 1 0 19 3L:15551426-15551489 7 6 2512 FBgn0004396 2312.63 76.99666667 118.8566667 0.002594449 0.077925451 0.050480971 16 2 9 0.01 dme-bantam-3p 6mer3-8 TGATCT 3L 15551698 15551703 + 3L_15551698_15551703_+ 1 1 1 0 CrebA FBtr0075558|FBtr0075557 15551273|15551273 15553214|15551905 3L + 15551556 15551744 3'utr CrebA FlyBase G30490.2 AATAAATATTCCACAGGGCCGAGATGACCAGAATGCCCATAACTAATATCGTATAAATAATATGTGTATGTAATCCTAGCTACTTGTAGGGCCTATATTATAAAGCTATGTATATTAGTCATGCATTCCTGTTATATAAACTTGATCTAGCTTAGGCAAATGACCAGCTGCAGCAACAACCACAATTAC 308 15551698 0.952304315 31 289 2365 0.941340782 1.92556991 0.097765363 0.149350649 0.268156425 308 18 3 337 3L:15551556-15551744 6 CrebA FBtr0075557|FBtr0075558 15551273|15551273 15551905|15553214 TGATCT 6mer3-8 dme-bantam-3p 3L + 15551617 15551744 3'utr CrebA FlyBase G23061.1 ATGTGTATGTAATCCTAGCTACTTGTAGGGCCTATATTATAAAGCTATGTATATTAGTCATGCATTCCTGTTATATAAACTTGATCTAGCTTAGGCAAATGACCAGCTGCAGCAACAACCACAATTAC 207 15551697 0.736924534 24 189 1582 0.910596026 1.837272703 0.119205298 0.352657005 0.556291391 207 24 3 275 3L:15551617-15551744 6 197.5 2513 FBgn0004396 2312.63 76.99666667 118.8566667 0.085400605 2.565046106 1.661665311 0 1 0.5 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 15552118 15552123 + 3L_15552118_15552123_+ 1 1 1 0 CrebA FBtr0075558 15551273 15553214 3L + 15552057 15552134 3'utr CrebA FlyBase G30493.2 TGAATGAATTAACGAAAGACTCCCGGAGCTCAATCTCTGTGCTGTCTTTGGCATGACTATTGTTCCTTTAAACGATAT 37 15552116 0.770716109 14 32 288 0.895833333 1.156347201 0.1875 0.27027027 0.4375 37 3 2 43 3L:15552057-15552134 6 CrebA FBtr0075558 15551273 15553214 GTTCCT 6mer2-7 dme-miR-276a-3p 3L + 15552072 15552141 3'utr CrebA FlyBase G23064.1 AAGACTCCCGGAGCTCAATCTCTGTGCTGTCTTTGGCATGACTATTGTTCCTTTAAACGATATTTCTCAA 28 15552117 0.713180509 8 27 242 0.956521739 1.643452676 0.304347826 0.428571429 0.652173913 28 2 0 44 3L:15552072-15552141 6 20 2514 FBgn0004396 2312.63 76.99666667 118.8566667 0.008648162 0.259751504 0.168269905 2 1 1.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3L 15552667 15552672 + 3L_15552667_15552672_+ 1 1 1 0 CrebA FBtr0075558 15551273 15553214 3L + 15552642 15552765 3'utr CrebA FlyBase G30495.1 TTTCGCAGCGTTCTAAATGAGTCATTCTAGTTTTTATTAGTTGAATTTATAAACACAAAATTACTTAACGGAAATTTCAAGCGTAACCCGTTGATTTCCTATCAACTCGATAATATGTATCTAT 99 15552666 0.909863664 15 96 907 0.965517241 2.049218023 0.120689655 0.151515152 0.275862069 99 4 0 112 3L:15552642-15552765 6 CrebA FBtr0075558 15551273 15553214 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 15552637 15552870 3'utr CrebA FlyBase G23067.1 ATTCTTTTCGCAGCGTTCTAAATGAGTCATTCTAGTTTTTATTAGTTGAATTTATAAACACAAAATTACTTAACGGAAATTTCAAGCGTAACCCGTTGATTTCCTATCAACTCGATAATATGTATCTATAAAATATAATTTAGCTATTTCTACGTATGTCTGTGCATGTGTGTATAAATCAAGCGGGCGAAGTTGTGCAATTGTTAGAAAATTTTTAAAAGAAAGATATTTAGT 60 15552666 0.988255138 17 52 472 0.873563218 1.579783597 0.310344828 0.333333333 0.540229885 60 10 1 76 3L:15552637-15552870 6 43 2515 FBgn0004396 2312.63 76.99666667 118.8566667 0.018593549 0.558465734 0.361780296 1 1 1 0.01 dme-miR-92b-3p 8mer-m1 GTGCAATT 3L 15552831 15552838 + 3L_15552831_15552838_+ 0.596698356 0.596698356 0.596698356 0 CrebA FBtr0075558 15551273 15553214 3L + 15552773 15552847 3'utr CrebA FlyBase G30496.1 AATTTAGCTATTTCTACGTATGTCTGTGCATGTGTGTATAAATCAAGCGGGCGAAGTTGTGCAATTGTTAGAAAA 19 15552830 0.736639603 10 19 156 1 1.342422681 0.181818182 0.105263158 0.227272727 19 0 0 22 3L:15552773-15552847 8 CrebA FBtr0075558 15551273 15553214 GTGCAATT 8mer-m1 dme-miR-92b-3p 3L + 15552637 15552870 3'utr CrebA FlyBase G23067.1 ATTCTTTTCGCAGCGTTCTAAATGAGTCATTCTAGTTTTTATTAGTTGAATTTATAAACACAAAATTACTTAACGGAAATTTCAAGCGTAACCCGTTGATTTCCTATCAACTCGATAATATGTATCTATAAAATATAATTTAGCTATTTCTACGTATGTCTGTGCATGTGTGTATAAATCAAGCGGGCGAAGTTGTGCAATTGTTAGAAAATTTTTAAAAGAAAGATATTTAGT 60 15552830 0.988255138 17 52 472 0.873563218 1.579783597 0.310344828 0.333333333 0.540229885 60 10 1 76 3L:15552637-15552870 8 11 2516 FBgn0004396 2312.63 76.99666667 118.8566667 0.004756489 0.142863327 0.092548448 1 1 1 0.01 dme-miR-92b-3p 7mer-m8 GTGCAAT 3L 15552915 15552921 + 3L_15552915_15552921_+ 0.659000077 0.659000077 0.659000077 0 CrebA FBtr0075558 15551273 15553214 3L + 15552884 15552929 3'utr CrebA FlyBase G30497.1 TCAGAAATCGATGTTGAAAAACAAAACGCTCGTGCAATGACAAACA 9 15552920 0.994317008 3 9 30 1 0.954242509 0.222222222 0 0 9 0 0 9 3L:15552884-15552929 7 CrebA FBtr0075558 15551273 15553214 GTGCAAT 7mer-m8 dme-miR-92b-3p 3L + 15552886 15553030 3'utr CrebA FlyBase G23068.1 AGAAATCGATGTTGAAAAACAAAACGCTCGTGCAATGACAAACAAAATTTTATTAATAAAGCGTTAAACAAACAAATTAAAGACAACATGAAATATACATTATGATATATTTATATATACAAGTATGAATAATGTACGACTATTT 16 15552920 0.984123635 11 15 76 0.961538462 1.397940009 0.230769231 0.4375 0.653846154 16 1 0 25 3L:15552886-15553030 7 6 2517 FBgn0004396 2312.63 76.99666667 118.8566667 0.002594449 0.077925451 0.050480971 -5 -5 -5 0.01 dme-miR-92b-3p 8mer-m1 GTGCAATT 3L 15553173 15553180 + 3L_15553173_15553180_+ 0.596698356 0.596698356 0.596698356 0 CrebA FBtr0075558 15551273 15553214 3L + 15553129 15553193 3'utr CrebA FlyBase G30499.1 GTAAAACTTTTATGATTGGTTGCTGTAATTTGGCAAAAGTAAAAGTGCAATTCCAAATAAAATTC 11 15553179 0.965474209 3 9 53 0.923076923 1.079181246 0.230769231 0.2 0.384615385 10 1 0 12 3L:15553129-15553193 8 CrebA FBtr0075558 15551273 15553214 GTGCAATT 8mer-m1 dme-miR-92b-3p 3L + 15553169 15553199 3'utr CrebA FlyBase G23069.2 AAAAGTGCAATTCCAAATAAAATTCAAACAA 8 15553179 0.766985485 2 6 31 0.777777778 0.84509804 0.222222222 0.125 0.222222222 8 2 0 7 3L:15553169-15553199 8 7.5 2518 FBgn0004396 2312.63 76.99666667 118.8566667 0.003243061 0.097406814 0.063101214 -6 -6 -6 0.01 dme-miR-970-3p 7mer-A1 CTTATGA 3L 1555544 1555550 - 3L_1555544_1555550_- 0.823349562 0.823349562 0.823349562 0 CG12099 FBtr0072829|FBtr0072828 1555361|1555361 1555568|1555568 3L - 1555526 1555569 stop_codon CG12099 FlyBase G33371.1 AAGAGCTAGATGATGATCGCTTATGAAGTTACAAGATTTATTGT 10 1555556 0.972331617 6 10 61 1 1.176091259 0.466666667 0.4 0.6 10 0 0 15 3L:1555526-1555569 7 CG12099 FBtr0072828|FBtr0072829 1555361|1555361 1555568|1555568 CTTATGA 7mer-A1 dme-miR-970-3p 3L - 1555529 1555568 3'utr CG12099 FlyBase G25241.1 AGAGCTAGATGATGATCGCTTATGAAGTTACAAGATTTAT 6 1555548 0.950875887 4 6 39 1 1.079181246 0.166666667 0.5 0.75 6 0 0 12 3L:1555529-1555568 7 8 2519 FBgn0035232 2030.816667 84.03 129.1233333 0.003939302 0.095204094 0.061956269 6 -2 2 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 15560772 15560778 - 3L_15560772_15560778_- 0.75417877 0.752533972 0.753356371 0.001163049 CG7739 FBtr0075596|FBtr0075596|FBtr0075596 15560724|15560724|15560724 15561085|15561085|15561085 3L - 15560749 15560803 3'utr CG7739 FlyBase G36968.1 TATATTTGTAATATGGTTTAAGAAATGTGATAATATAAAAAAGATAAAAAATAAT 34 15560787 0.709222123 7 32 252 0.951219512 1.591064607 0.170731707 0.117647059 0.268292683 34 2 0 39 3L:15560749-15560803 7 CG7739 FBtr0075596|FBtr0075596|FBtr0075596 15560724|15560724|15560724 15561085|15561085|15561085 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 15560757 15560809 3'utr CG7739 FlyBase G27913.1 ATAATTTATATTTGTAATATGGTTTAAGAAATGTGATAATATAAAAAAGATAA 31 15560787 0.983927689 8 28 220 0.93877551 1.662757832 0.224489796 0.451612903 0.653061224 31 3 0 46 3L:15560757-15560809 7 30 2520 FBgn0036509 636.82 33.70333333 51.37 0.047109073 0.890119672 0.583998443 9 9 9 0.01 dme-miR-2a-2-5p 7mer-m8 TGATGAG 3L 15560836 15560842 + 3L_15560836_15560842_+ 0.658999343 0.658999343 0.658999343 0 AGO2 FBtr0075560|FBtr0331933|FBtr0075559 15560730|15560730|15560730 15561042|15561042|15561042 3L + 15560797 15560877 3'utr AGO2 FlyBase G30521.1 AAATATAAATTATGTAAAGGAGCATCTCTATTGATTCCATGATGAGCTATGATTTTAAAAGCCGCCTTGAGATGGTCCGCC 22 15560807 0.786331365 12 20 141 0.961538462 1.397940009 0.192307692 0.136363636 0.269230769 22 1 0 25 3L:15560797-15560877 7 AGO2 FBtr0075560|FBtr0331933|FBtr0075559 15560730|15560730|15560730 15561042|15561042|15561042 TGATGAG 7mer-m8 dme-miR-2a-2-5p 3L + 15560798 15560844 3'utr AGO2 FlyBase G23088.1 AATATAAATTATGTAAAGGAGCATCTCTATTGATTCCATGATGAGCT 13 15560807 0.877901483 6 10 92 0.764705882 1.113943352 0.176470588 0.307692308 0.470588235 13 4 0 13 3L:15560798-15560844 7 8.5 2521 FBgn0087035 9002.526667 265.6766667 406.73 0.000944179 0.031993777 0.020898385 29 29 29 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3L 15575785 15575790 + 3L_15575785_15575790_+ 1 1 1 0 dop FBtr0332091|FBtr0075562 15575752|15575752 15576313|15576313 3L + 15575763 15575797 3'utr dop FlyBase G30557.1 AGCCGCGGTGGATATGGATGCTTGTGTTTTAAGTT 11 15575777 0.78137355 3 11 76 1 1.079181246 0.583333333 0.090909091 0.166666667 11 0 0 12 3L:15575763-15575797 6 dop FBtr0332091|FBtr0075562 15575752|15575752 15576313|15576313 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 15575752 15575795 stop_codon dop FlyBase G23116.1 AGCGCCAGAGTAGCCGCGGTGGATATGGATGCTTGTGTTTTAAG 5 15575785 0.9748858 4 5 31 1 0.77815125 0.833333333 0.2 0.333333333 5 0 0 6 3L:15575752-15575795 6 7 2522 FBgn0267390 1101.073333 17.43 26.69 0.006357433 0.401606426 0.262270513 8 0 4 0.01 dme-miR-2a-2-5p 8mer-A1 TGATGAGA 3L 15575819 15575826 + 3L_15575819_15575826_+ 0.601217767 0.601217767 0.601217767 0 dop FBtr0332091|FBtr0075562 15575752|15575752 15576313|15576313 3L + 15575808 15575864 3'utr dop FlyBase G30558.1 ATAGTTATTCGTGATGAGAATGGGCGCGGATGGTGGGCAGGAAATGGAAGGCCGCAG 8 15575828 0.939174053 5 7 29 0.875 0.84509804 0.5 0 0 8 1 0 7 3L:15575808-15575864 8 dop FBtr0332091|FBtr0075562 15575752|15575752 15576313|15576313 TGATGAGA 8mer-A1 dme-miR-2a-2-5p 3L + 15575814 15575847 3'utr dop FlyBase G23117.1 ATTCGTGATGAGAATGGGCGCGGATGGTGGGCAG 5 15575828 0.943837141 2 3 15 0.875 0.84509804 0.875 0.4 0.625 5 1 0 7 3L:15575814-15575847 8 4.5 2523 FBgn0267390 1101.073333 17.43 26.69 0.004086921 0.258175559 0.168602473 -9 -9 -9 0.01 dme-miR-318-3p 6mer2-7 CCAGTG 3L 15576211 15576216 + 3L_15576211_15576216_+ 1 1 1 0 dop FBtr0332091|FBtr0075562 15575752|15575752 15576313|15576313 3L + 15576164 15576231 3'utr dop FlyBase G30561.1 TAACGAATTGTGGACTATGGATGATAGTCGATGGGAGAGTCATGGAGCCAGTGGCGCGGTGTTGGGCT 12 15576206 0.925217209 4 11 65 1 1.146128036 0.5 0.083333333 0.214285714 12 0 0 14 3L:15576164-15576231 6 dop FBtr0332091|FBtr0075562 15575752|15575752 15576313|15576313 CCAGTG 6mer2-7 dme-miR-318-3p 3L + 15576167 15576225 3'utr dop FlyBase G23119.1 CGAATTGTGGACTATGGATGATAGTCGATGGGAGAGTCATGGAGCCAGTGGCGCGGTGT 6 15576205 0.961354981 4 6 32 1 1.176091259 0 0.666666667 0.866666667 6 0 0 15 3L:15576167-15576225 6 4.5 2524 FBgn0267390 1101.073333 17.43 26.69 0.004086921 0.258175559 0.168602473 5 6 5.5 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3L 15603042 15603047 + 3L_15603042_15603047_+ 1 1 1 0 RhoGAP71E FBtr0075568|FBtr0075567 15602556|15602699 15603119|15603119 3L + 15603027 15603054 3'utr RhoGAP71E FlyBase G30598.1 AATCAACAACACATTAAGACTTAAGAAT 7 15603041 0.960273592 2 5 24 0.625 0.698970004 0.5 0.142857143 0.25 7 3 0 5 3L:15603027-15603054 6 RhoGAP71E FBtr0075568|FBtr0075567 15602556|15602699 15603119|15603119 AAGACT 6mer3-8 dme-miR-14-3p 3L + 15603022 15603061 3'utr RhoGAP71E FlyBase G23138.1 ACAACAATCAACAACACATTAAGACTTAAGAATTTGAAGA 9 15603041 0.707234511 3 8 32 1 1.041392685 0.090909091 0.25 0.454545455 8 0 0 11 3L:15603022-15603061 6 6.5 2525 FBgn0036518 3855.043333 129.2366667 200.3833333 0.001686103 0.050295324 0.032437827 1 1 1 0.01 dme-miR-34-5p 6mer2-7 ACTGCC 3L 15606996 15607001 + 3L_15606996_15607001_+ 1 1 1 0 RhoGAP71E FBtr0290065|FBtr0332092|FBtr0303510 15606679|15604842|15606675 15609125|15609125|15609125 3L + 15606936 15607009 3'utr RhoGAP71E FlyBase G30606.1 AGCTGCAGGATCGGCCGTCGGTGTTCCGGTGCTAAACAAACCCCTACTGATGGTCGGCCTACTGCCGGGTGCCG 10 15606985 0.944190674 6 10 43 1 1.113943352 0.153846154 0.3 0.461538462 10 0 0 13 3L:15606936-15607009 6 RhoGAP71E FBtr0290065|FBtr0303510|FBtr0332092 15606679|15606675|15604842 15609125|15609125|15609125 ACTGCC 6mer2-7 dme-miR-34-5p 3L + 15606943 15606996 3'utr RhoGAP71E FlyBase G23145.1 GGATCGGCCGTCGGTGTTCCGGTGCTAAACAAACCCCTACTGATGGTCGGCCTA 6 15606983 0.948358068 4 6 28 1 0.903089987 0.25 0.333333333 0.5 6 0 0 8 3L:15606943-15606996 1 4 2526 FBgn0036518 3855.043333 129.2366667 200.3833333 0.001037602 0.030950969 0.01996174 11 13 12 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 3L 15607454 15607459 + 3L_15607454_15607459_+ 1 1 1 0 RhoGAP71E FBtr0290065|FBtr0332093|FBtr0075569|FBtr0332092|FBtr0303510 15606679|15607124|15607124|15604842|15606675 15609125|15609125|15609125|15609125|15609125 3L + 15607347 15607465 3'utr RhoGAP71E FlyBase G30608.1 AAATCTCTGTAGATTTTGACGGCCCCTCTTGAAAACCATCATACATTAGGTTATGGTAAACGATATATGTATTTAATGTGTATAGCAAGAAAAGGCTGATTTTCTTTAGTTAAACAAAC 76 15607447 0.944335258 21 69 612 0.904761905 1.880813592 0.035714286 0.105263158 0.19047619 76 8 0 76 3L:15607347-15607465 6 RhoGAP71E FBtr0332093|FBtr0290065|FBtr0303510|FBtr0332092|FBtr0075569 15607124|15606679|15606675|15604842|15607124 15609125|15609125|15609125|15609125|15609125 AGTTAA 6mer3-8 dme-miR-999-3p 3L + 15607392 15607466 3'utr RhoGAP71E FlyBase G23147.1 TTAGGTTATGGTAAACGATATATGTATTTAATGTGTATAGCAAGAAAAGGCTGATTTTCTTTAGTTAAACAAACA 61 15607446 0.643722742 12 56 473 0.894736842 1.929418926 0.031578947 0.393442623 0.610526316 61 10 0 85 3L:15607392-15607466 6 20 2527 FBgn0036518 3855.043333 129.2366667 200.3833333 0.005188009 0.154754843 0.0998087 7 8 7.5 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3L 15607582 15607588 + 3L_15607582_15607588_+ 0.521223855 0.521223855 0.521223855 0 RhoGAP71E FBtr0290065|FBtr0332093|FBtr0075569|FBtr0332092|FBtr0303510 15606679|15607124|15607124|15604842|15606675 15609125|15609125|15609125|15609125|15609125 3L + 15607541 15607594 3'utr RhoGAP71E FlyBase G30609.1 TGCAACAAATTGCCAAATTTTATTCAGCATTCATTTCGTTGTGTGATTTAGGTT 7 15607588 0.991085839 3 7 70 1 1.041392685 0.090909091 0.571428571 0.727272727 7 0 0 11 3L:15607541-15607594 7 RhoGAP71E FBtr0332093|FBtr0290065|FBtr0303510|FBtr0332092|FBtr0075569 15607124|15606679|15606675|15604842|15607124 15609125|15609125|15609125|15609125|15609125 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 15607566 15607595 3'utr RhoGAP71E FlyBase G23148.1 AGCATTCATTTCGTTGTGTGATTTAGGTTG 7 15607588 0.766555008 2 7 77 1 1.113943352 0.384615385 0.571428571 0.769230769 7 0 0 13 3L:15607566-15607595 7 6 2528 FBgn0036518 3855.043333 129.2366667 200.3833333 0.001556403 0.046426453 0.02994261 -6 -6 -6 0.01 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3L 15608457 15608462 + 3L_15608457_15608462_+ 0.999986632 0.99992816 0.999957396 4.13E-05 RhoGAP71E FBtr0290065|FBtr0332093|FBtr0075569|FBtr0332092|FBtr0303510 15606679|15607124|15607124|15604842|15606675 15609125|15609125|15609125|15609125|15609125 3L + 15608414 15608474 3'utr RhoGAP71E FlyBase G30613.1 TCTTTGCGAAGTTAGAGAAAGAAACAATTTCCTCCTCGCTGTGTTTGACCGACCACATTTG 10 15608458 0.981315789 7 10 70 1 1.204119983 0.125 0.3 0.5625 10 0 0 16 3L:15608414-15608474 6 RhoGAP71E FBtr0332093|FBtr0290065|FBtr0303510|FBtr0332092|FBtr0075569 15607124|15606679|15606675|15604842|15607124 15609125|15609125|15609125|15609125|15609125 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3L + 15608439 15608466 3'utr RhoGAP71E FlyBase G23150.1 AATTTCCTCCTCGCTGTGTTTGACCGAC 5 15608458 0.799343531 3 5 45 1 1 0.3 0.8 0.9 5 0 0 10 3L:15608439-15608466 6 6.5 2529 FBgn0036518 3855.043333 129.2366667 200.3833333 0.001686103 0.050295324 0.032437827 -1 -1 -1 0.01 dme-miR-33-5p 7mer-A1 AATGCAA 3L 15608650 15608656 + 3L_15608650_15608656_+ 0.782911824 0.782911824 0.782911824 0 RhoGAP71E FBtr0290065|FBtr0332093|FBtr0075569|FBtr0332092|FBtr0303510 15606679|15607124|15607124|15604842|15606675 15609125|15609125|15609125|15609125|15609125 3L + 15608614 15608720 3'utr RhoGAP71E FlyBase G30615.1 AAAGCTCTGAATGTTGCCCAGAATTTAGGAATGAGAAATGCAAGAAACACCAATTTGTTGATTAGCAAAGCAAACAAAAAGAAGGTTAATTTTATCGACATCATTTT 242 15608652 0.993931616 7 240 394 0.996336996 2.434568904 0.025641026 0.119834711 0.21978022 242 1 0 272 3L:15608614-15608720 7 RhoGAP71E FBtr0332093|FBtr0290065|FBtr0303510|FBtr0332092|FBtr0075569 15607124|15606679|15606675|15604842|15607124 15609125|15609125|15609125|15609125|15609125 AATGCAA 7mer-A1 dme-miR-33-5p 3L + 15608614 15608672 3'utr RhoGAP71E FlyBase G23152.1 AAAGCTCTGAATGTTGCCCAGAATTTAGGAATGAGAAATGCAAGAAACACCAATTTGTT 155 15608652 0.997891332 2 155 252 1 2.365487985 0.012931034 0.348387097 0.564655172 155 0 0 232 3L:15608614-15608672 7 194.5 2530 FBgn0036518 3855.043333 129.2366667 200.3833333 0.050453389 1.504990844 0.970639607 -2 -2 -2 0.01 dme-miR-252-5p 6mer3-8 GTACTT 3L 15608796 15608801 - 3L_15608796_15608801_- 1 1 1 0 CG7650 FBtr0075591 15608705 15609453 3L - 15608739 15608905 3'utr CG7650 FlyBase G36986.1 TGGAACAGATCCTGCTCACTAAATATAGCGTATATCTATAACGATTCTGTCATCATTTACAACACGATTTATATTTATGTAATAGTATTTAGTGGCTAATGAATGTACTTCACTCGAACTCGTACTCCGTAAGATTTATACAATTATATATTTTATAGCTTATAGCC 66 15608802 0.9856153 18 61 498 0.942528736 1.913813852 0.137931034 0.212121212 0.402298851 66 5 0 82 3L:15608739-15608905 6 CG7650 FBtr0075591 15608705 15609453 GTACTT 6mer3-8 dme-miR-252-5p 3L - 15608772 15608848 3'utr CG7650 FlyBase G27926.1 TACAACACGATTTATATTTATGTAATAGTATTTAGTGGCTAATGAATGTACTTCACTCGAACTCGTACTCCGTAAGA 41 15608802 0.983139447 6 38 297 0.967741935 1.77815125 0.14516129 0.317073171 0.548387097 41 2 0 60 3L:15608772-15608848 6 43.5 2531 FBgn0036519 328.6966667 23.90333333 36.63666667 0.132340861 1.81982987 1.187335092 1 1 1 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 15609176 15609182 - 3L_15609176_15609182_- 0.661615645 0.661615645 0.661615645 0 CG7650 FBtr0075591 15608705 15609453 3L - 15609136 15609261 3'utr CG7650 FlyBase G36989.1 ACACGACTTCTTGGAATCTCCGAGTTACTTGTCAGTTTAAGCCAGGGCTTTAGAATTATACGCAAATTTTGACCAAATATGTGTTCGTAAGATTAGCATTTAAGAGAACTTAAGCCCGCCCTCCGT 81 15609182 0.876618309 18 75 704 0.930693069 1.672097858 0.138613861 0.209876543 0.366336634 81 6 1 94 3L:15609136-15609261 7 CG7650 FBtr0075591 15608705 15609453 TGTGTTC 7mer-m8 dme-miR-317-3p 3L - 15609137 15609288 3'utr CG7650 FlyBase G27928.1 TATAATTTGTATCAACAAAAGAAACTAACACGACTTCTTGGAATCTCCGAGTTACTTGTCAGTTTAAGCCAGGGCTTTAGAATTATACGCAAATTTTGACCAAATATGTGTTCGTAAGATTAGCATTTAAGAGAACTTAAGCCCGCCCTCCG 59 15609182 0.987765252 21 53 469 0.926315789 1.944482672 0.105263158 0.474576271 0.673684211 59 7 0 88 3L:15609137-15609288 7 42 2532 FBgn0036519 328.6966667 23.90333333 36.63666667 0.127777383 1.757077116 1.146392503 0 0 0 0.01 dme-miR-252-5p 6mer3-8 GTACTT 3L 15623068 15623073 + 3L_15623068_15623073_+ 1 1 1 0 CG7372 FBtr0075570 15623010 15624130 3L + 15622976 15623095 stop_codon CG7372 FlyBase G30623.1 TACTTCACTGTCGTGGGTCAGCAGGCGGAAATTTAAAGACTTAAGTTCAGGGTCAGCAACACTTCTTACTCATTACATTTTAAGATGCCACTGTACTTGGAAATGATGGAGACATTTCCC 43 15623067 0.971179522 11 41 236 0.964285714 1.431363764 0.125 0.255813953 0.428571429 43 1 1 54 3L:15622976-15623095 6 CG7372 FBtr0075570 15623010 15624130 GTACTT 6mer3-8 dme-miR-252-5p 3L + 15622995 15623096 stop_codon CG7372 FlyBase G23159.1 AGCAGGCGGAAATTTAAAGACTTAAGTTCAGGGTCAGCAACACTTCTTACTCATTACATTTTAAGATGCCACTGTACTTGGAAATGATGGAGACATTTCCCT 33 15623067 0.976130648 10 32 202 0.97826087 1.653212514 0.304347826 0.272727273 0.47826087 33 1 0 45 3L:15622995-15623096 6 21 2533 FBgn0036522 715.7133333 20.76333333 31.90666667 0.029341356 1.011398298 0.658169662 1 1 1 0.01 dme-miR-8-3p 6mer2-7 AGTATT 3L 15623161 15623166 + 3L_15623161_15623166_+ 1 0.999999972 0.999999986 0 CG7372 FBtr0075570 15623010 15624130 3L + 15623124 15623172 3'utr CG7372 FlyBase G30624.1 TTTTTCGATTTAAAATGCAATCTTGCAGCAGGGATCAAGTATTTTCTAT 13 15623167 0.651479357 6 12 94 0.933333333 1.146128036 0.2 0.153846154 0.266666667 13 1 0 14 3L:15623124-15623172 6 CG7372 FBtr0075570 15623010 15624130 AGTATT 6mer2-7 dme-miR-8-3p 3L + 15623124 15623171 3'utr CG7372 FlyBase G23160.1 TTTTTCGATTTAAAATGCAATCTTGCAGCAGGGATCAAGTATTTTCTA 8 15623167 0.979456994 3 8 54 1 1.041392685 0.363636364 0.375 0.545454545 8 0 0 11 3L:15623124-15623171 6 7 2534 FBgn0036522 715.7133333 20.76333333 31.90666667 0.009780452 0.337132766 0.219389887 -6 -6 -6 0.01 dme-miR-1002-5p 6mer3-8 CTACTT 3L 15623273 15623278 + 3L_15623273_15623278_+ 0.999997324 0.999996882 0.999997103 2.83E-07 CG7372 FBtr0075570 15623010 15624130 3L + 15623194 15623334 3'utr CG7372 FlyBase G30625.1 GATCTAATTTTGAGGATACGGTTAGCCGAGAATTATTCAACGTTGTGAAGGACATAAAGCCGACAAGAACAAGAAAAGACTACTTTATAAAAGAAATAATGATATTTGATATGAAGAAATCAAGCAAGAGACTGCAATGAG 25 15623277 0.989834989 10 23 108 0.935483871 1.462397998 0.387096774 0.2 0.35483871 25 2 0 29 3L:15623194-15623334 6 CG7372 FBtr0075570 15623010 15624130 CTACTT 6mer3-8 dme-miR-1002-5p 3L + 15623249 15623334 3'utr CG7372 FlyBase G23161.2 AAAGCCGACAAGAACAAGAAAAGACTACTTTATAAAAGAAATAATGATATTTGATATGAAGAAATCAAGCAAGAGACTGCAATGAG 17 15623277 0.951685341 5 13 45 0.869565217 1.301029996 0.217391304 0.294117647 0.47826087 17 3 0 20 3L:15623249-15623334 6 8 2535 FBgn0036522 715.7133333 20.76333333 31.90666667 0.01117766 0.38529459 0.2507313 -4 -4 -4 0.01 dme-miR-92b-3p 6mer2-7 TGCAAT 3L 15623326 15623331 + 3L_15623326_15623331_+ 1 0.999999918 0.999999959 7.07E-08 CG7372 FBtr0075570 15623010 15624130 3L + 15623194 15623334 3'utr CG7372 FlyBase G30625.1 GATCTAATTTTGAGGATACGGTTAGCCGAGAATTATTCAACGTTGTGAAGGACATAAAGCCGACAAGAACAAGAAAAGACTACTTTATAAAAGAAATAATGATATTTGATATGAAGAAATCAAGCAAGAGACTGCAATGAG 25 15623331 0.989834989 10 23 108 0.935483871 1.462397998 0.387096774 0.2 0.35483871 25 2 0 29 3L:15623194-15623334 6 CG7372 FBtr0075570 15623010 15624130 TGCAAT 6mer2-7 dme-miR-92b-3p 3L + 15623249 15623334 3'utr CG7372 FlyBase G23161.2 AAAGCCGACAAGAACAAGAAAAGACTACTTTATAAAAGAAATAATGATATTTGATATGAAGAAATCAAGCAAGAGACTGCAATGAG 17 15623331 0.951685341 5 13 45 0.869565217 1.301029996 0.217391304 0.294117647 0.47826087 17 3 0 20 3L:15623249-15623334 6 6.5 2536 FBgn0036522 715.7133333 20.76333333 31.90666667 0.009081848 0.313051854 0.203719181 -5 -5 -5 0.01 dme-miR-277-3p 7mer-A1 GCATTTA 3L 15623676 15623682 + 3L_15623676_15623682_+ 0.823349562 0.823290514 0.823320038 4.18E-05 CG7372 FBtr0075570 15623010 15624130 3L + 15623643 15623686 3'utr CG7372 FlyBase G30628.1 TTGATTTGCAAACATATTCCTTCCATTCCCCCCGCATTTATAAT 34 15623668 0.842535895 2 34 315 1 1.579783597 0.026315789 0.088235294 0.184210526 34 0 0 38 3L:15623643-15623686 7 CG7372 FBtr0075570 15623010 15624130 GCATTTA 7mer-A1 dme-miR-277-3p 3L + 15623625 15623683 3'utr CG7372 FlyBase G23163.1 GCGCACACCGATTCGAATTTGATTTGCAAACATATTCCTTCCATTCCCCCCGCATTTAT 22 15623668 0.983237256 4 22 167 1 1.505149978 0.0625 0.454545455 0.625 22 0 0 32 3L:15623625-15623683 7 25 2537 FBgn0036522 715.7133333 20.76333333 31.90666667 0.034930186 1.204045593 0.783535311 8 8 8 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT 3L 15624067 15624073 + 3L_15624067_15624073_+ 0.658999527 0.658999527 0.658999527 0 CG7372 FBtr0075570 15623010 15624130 3L + 15624025 15624104 3'utr CG7372 FlyBase G30630.1 TTTCCTACATACACTGAACGCATTTTTGTAAATTGAATTTGTGGCAGCTTCTCTCATTCTGTAGCATCTAAGAGAGTCCG 89 15624066 0.988220883 13 81 741 0.935185185 1.305351369 0.046296296 0.179775281 0.324074074 89 3 4 101 3L:15624025-15624104 7 CG7372 FBtr0075570 15623010 15624130 GGCAGCT 7mer-m8 dme-miR-980-3p 3L + 15624026 15624107 3'utr CG7372 FlyBase G23165.1 TTCCTACATACACTGAACGCATTTTTGTAAATTGAATTTGTGGCAGCTTCTCTCATTCTGTAGCATCTAAGAGAGTCCGATG 63 15624066 0.986406259 14 61 518 0.954545455 1.322219295 0.056818182 0.253968254 0.465909091 63 1 3 84 3L:15624026-15624107 7 70 2538 FBgn0036522 715.7133333 20.76333333 31.90666667 0.097804521 3.371327661 2.193898872 1 1 1 0.01 dme-miR-308-3p 8mer-m1 CTGTGATT 3L 15697771 15697778 - 3L_15697771_15697778_- 0.385560641 0.266413537 0.325987089 0.084249722 comm2 FBtr0075580 15697592 15697888 3L - 15697766 15697817 3'utr comm2 FlyBase G36995.1 ATGCTGGAAAGACATACCCATATGTAATTAAACTAAGCGCTGTGATTATCAA 8 15697771 0.97331216 6 8 42 1 1.041392685 0 0.25 0.454545455 8 0 0 11 3L:15697766-15697817 8 comm2 FBtr0075580 15697592 15697888 CTGTGATT 8mer-m1 dme-miR-308-3p 3L - 15697768 15697796 3'utr comm2 FlyBase G27934.1 ATGTAATTAAACTAAGCGCTGTGATTATC 9 15697772 0.64862333 4 8 61 0.923076923 1.079181246 0 0.333333333 0.538461538 9 1 0 12 3L:15697768-15697796 8 7 2539 FBgn0041160 0.666666667 0.056666667 0.09 10.5 123.5294118 77.77777778 -7 -6 -6.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3L 15697829 15697836 - 3L_15697829_15697836_- 0.527663868 0.650171355 0.588917611 0.086625884 comm2 FBtr0075580|FBtr0075580|FBtr0075580 15697592|15697592|15697592 15697888|15697888|15697888 3L - 15697824 15697848 3'utr comm2 FlyBase G36996.1 AGCAACTGAGCTCTGTGATATTTTC 5 15697837 0.689243757 3 5 34 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 3L:15697824-15697848 8 comm2 FBtr0075580|FBtr0075580|FBtr0075580 15697592|15697592|15697592 15697888|15697888|15697888 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 15697824 15697849 3'utr comm2 FlyBase G27935.1 AAGCAACTGAGCTCTGTGATATTTTC 10 15697837 0.792300054 2 8 79 0.705882353 1.079181246 0.058823529 0.4 0.647058824 10 5 0 12 3L:15697824-15697849 8 7.5 2540 FBgn0041160 0.666666667 0.056666667 0.09 11.25 132.3529412 83.33333333 1 1 1 0.01 dme-miR-252-5p 7mer-m8 GTACTTA 3L 1574136 1574142 + 3L_1574136_1574142_+ 0.588299917 0.588299917 0.588299917 0 CG12004 FBtr0072746|FBtr0072745 1574027|1574027 1574732|1574732 3L + 1574075 1574148 3'utr CG12004 FlyBase G27159.1 AATTGCAATCACAATTCCACATTTCCGAGCGGGACGCGATCCGAAAGCGAAGCAAACAAGTGTACTTATAGCCC 38 1574135 0.955006835 6 37 155 0.980392157 1.698970004 0.176470588 0.263157895 0.450980392 38 1 0 50 3L:1574075-1574148 7 CG12004 FBtr0072745|FBtr0072746 1574027|1574027 1574732|1574732 GTACTTA 7mer-m8 dme-miR-252-5p 3L + 1574091 1574148 3'utr CG12004 FlyBase G20557.1 CCACATTTCCGAGCGGGACGCGATCCGAAAGCGAAGCAAACAAGTGTACTTATAGCCC 13 1574135 0.957730548 2 12 52 0.882352941 0.698970004 0.117647059 0.307692308 0.470588235 13 0 2 15 3L:1574091-1574148 7 20.5 2541 FBgn0035236 1184.423333 63.35333333 97.16 0.017308001 0.323582027 0.210992178 1 1 1 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 3L 1574233 1574238 + 3L_1574233_1574238_+ 1 1 1 0 CG12004 FBtr0072746|FBtr0072746|FBtr0072745|FBtr0072745 1574027|1574027|1574027|1574027 1574732|1574732|1574732|1574732 3L + 1574203 1574290 3'utr CG12004 FlyBase G27160.1 AGAGGAAGATACGTACTAGGCCTAGTTACTTACTTACTCACTCCACAAAACGCTGAAAGCTGAACAGAAATTAACTTAGCCAGTCCAT 21 1574237 0.989704286 8 16 154 0.84 1.021189299 0 0.142857143 0.28 21 3 1 21 3L:1574203-1574290 6 CG12004 FBtr0072745|FBtr0072745|FBtr0072746|FBtr0072746 1574027|1574027|1574027|1574027 1574732|1574732|1574732|1574732 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 3L + 1574209 1574249 3'utr CG12004 FlyBase G20558.1 AGATACGTACTAGGCCTAGTTACTTACTTACTCACTCCACA 16 1574236 0.707351064 5 15 125 0.931034483 1.431363764 0 0.5 0.724137931 16 2 0 27 3L:1574209-1574249 6 16.5 2542 FBgn0035236 1184.423333 63.35333333 97.16 0.01393083 0.26044407 0.169822972 -4 -3 -3.5 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3L 1574324 1574329 + 3L_1574324_1574329_+ 1 1 1 0 CG12004 FBtr0072746|FBtr0072745 1574027|1574027 1574732|1574732 3L + 1574311 1574418 3'utr CG12004 FlyBase G27161.1 TTGCCTCTGCGTCTGTGTTTCTGTATTTCCTACGTTTACACTCTACACCTAAACTTAAGCGTTTTTTAAAACAACTTATTTAGACGTTAGCTATGTACGAAACGAACT 24 1574324 0.963673178 12 23 184 0.962962963 1.414973348 0.259259259 0.125 0.222222222 24 1 0 26 3L:1574311-1574418 6 CG12004 FBtr0072745|FBtr0072746 1574027|1574027 1574732|1574732 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 1574308 1574362 3'utr CG12004 FlyBase G20560.1 GAGTTGCCTCTGCGTCTGTGTTTCTGTATTTCCTACGTTTACACTCTACACCTAA 13 1574328 0.991571634 9 12 132 1 1.322219295 0.095238095 0.538461538 0.714285714 13 0 0 21 3L:1574308-1574362 6 9.5 2543 FBgn0035236 1184.423333 63.35333333 97.16 0.008020781 0.149952647 0.097776863 0 -4 -2 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 1574571 1574576 + 3L_1574571_1574576_+ 1 1 1 0 CG12004 FBtr0072746|FBtr0072745 1574027|1574027 1574732|1574732 3L + 1574548 1574594 3'utr CG12004 FlyBase G27162.2 GTGTTTCCGTTTCGCTCAAAGATACCAAAAACGAAGTTTTTCCTTCT 61 1574570 0.991018113 2 59 247 0.971830986 1.838849091 0.338028169 0.131147541 0.253521127 61 2 0 69 3L:1574548-1574594 6 CG12004 FBtr0072745|FBtr0072746 1574027|1574027 1574732|1574732 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 1574451 1574594 3'utr CG12004 FlyBase G20561.1 AAAGATTTTATTATACTGTATGCAACAATGGCAGTCGCTGAACAGGATTCCCCATTCAAGCGATCTTCAAGCTAGTTTCCCCTCAGCATTTATTTACGTGTTTCCGTTTCGCTCAAAGATACCAAAAACGAAGTTTTTCCTTCT 54 1574570 0.992811199 11 54 251 1 1.86332286 0.260273973 0.259259259 0.452054795 54 0 0 73 3L:1574451-1574594 6 48 2544 FBgn0035236 1184.423333 63.35333333 97.16 0.040526051 0.757655477 0.494030465 1 1 1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 1574627 1574633 + 3L_1574627_1574633_+ 0.801970437 0.801970437 0.801970437 0 CG12004 FBtr0072746|FBtr0072746|FBtr0072746|FBtr0072745|FBtr0072745|FBtr0072745 1574027|1574027|1574027|1574027|1574027|1574027 1574732|1574732|1574732|1574732|1574732|1574732 3L + 1574614 1574645 3'utr CG12004 FlyBase G27163.1 TTGACCACCCTTTTGTGATAAGCTCTCGTCGT 94 1574625 0.710938974 4 87 718 0.941176471 1.204119983 0.235294118 0.234042553 0.394957983 94 1 6 112 3L:1574614-1574645 7 CG12004 FBtr0072745|FBtr0072745|FBtr0072745|FBtr0072746|FBtr0072746|FBtr0072746 1574027|1574027|1574027|1574027|1574027|1574027 1574732|1574732|1574732|1574732|1574732|1574732 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 1574602 1574645 3'utr CG12004 FlyBase G20562.1 TGATTTCCCCTTTTGACCACCCTTTTGTGATAAGCTCTCGTCGT 51 1574625 0.738337802 7 49 382 0.972222222 1.544068044 0.25 0.333333333 0.527777778 51 1 1 70 3L:1574602-1574645 7 72 2545 FBgn0035236 1184.423333 63.35333333 97.16 0.060789076 1.136483216 0.741045698 2 2 2 0.01 dme-miR-317-5p 6mer3-8 GTATCC 3L 15810362 15810367 - 3L_15810362_15810367_- 1 1 1 0 fwe FBtr0075542|FBtr0075541|FBtr0075543 15810079|15810079|15810079 15810703|15812758|15812207 3L - 15810310 15810394 3'utr fwe FlyBase G36997.1 TGGTTTTAAAAGCGTTTTGCGTTTTCTGTATCCTATTAATTAATTGTGTTGCCTGTGTCCCATCATTCCAAAACATTTGGTTTCA 11 15810378 0.989172425 7 11 122 1 1.041392685 0.181818182 0 0 11 0 0 11 3L:15810310-15810394 6 fwe FBtr0075541|FBtr0075543|FBtr0075542 15810079|15810079|15810079 15812758|15812207|15810703 GTATCC 6mer3-8 dme-miR-317-5p 3L - 15810319 15810385 3'utr fwe FlyBase G27937.1 AAGCGTTTTGCGTTTTCTGTATCCTATTAATTAATTGTGTTGCCTGTGTCCCATCATTCCAAAACAT 8 15810370 0.965233012 5 8 76 1 1 0.3 0.25 0.4 8 0 0 10 3L:15810319-15810385 6 4.5 2546 FBgn0261722 816.3866667 52.16 79.50666667 0.005512094 0.086273006 0.056599027 11 3 7 0.01 dme-bantam-3p 7mer-m8 TGATCTC 3L 15810495 15810501 - 3L_15810495_15810501_- 0.661615243 0.661615243 0.661615243 0 fwe FBtr0075542|FBtr0075541|FBtr0075543 15810079|15810079|15810079 15810703|15812758|15812207 3L - 15810450 15810515 3'utr fwe FlyBase G36998.1 AATCCGATTAGCTCTGATCTCTTTCTAGAGCAATCCAAATTACTCGATCAGAAAGAAGCCACCCAA 94 15810494 0.986133988 7 88 742 0.941176471 1.447158031 0.075630252 0.212765957 0.378151261 94 4 3 112 3L:15810450-15810515 7 fwe FBtr0075541|FBtr0075543|FBtr0075542 15810079|15810079|15810079 15812758|15812207|15810703 TGATCTC 7mer-m8 dme-bantam-3p 3L - 15810480 15810518 3'utr fwe FlyBase G27938.1 TTAAATCCGATTAGCTCTGATCTCTTTCTAGAGCAATCC 47 15810494 0.707231811 4 47 361 1 1.826074803 0.029850746 0.361702128 0.552238806 47 0 0 67 3L:15810480-15810518 7 70 2547 FBgn0261722 816.3866667 52.16 79.50666667 0.085743684 1.34202454 0.880429314 -7 -7 -7 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3L 15810702 15810708 - 3L_15810702_15810708_- 0.521223855 0.521223855 0.521223855 0 fwe FBtr0075541|FBtr0075543 15810079|15810079 15812758|15812207 3L - 15810687 15810778 stop_codon fwe FlyBase G36999.3 GATCGAGCGGGGATTGTGAACAACGCCCAGCCCTTCTCCTTCACCGGTGCCGTGGGCACGGACAGCAATGTGTGATTCAGAAGCTAGCTGAT 43 15810710 0.951120057 8 40 191 0.981481481 1.72427587 0.425925926 0.209302326 0.37037037 43 1 0 53 3L:15810687-15810778 7 fwe FBtr0075541|FBtr0075543 15810079|15810079 15812758|15812207 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 15810586 15810734 stop_codon fwe FlyBase G27939.1 CGGTGCCGTGGGCACGGACAGCAATGTGTGATTCAGAAGCTAGCTGATCGGGATTTCGAGGAATCGAAGAGCTGGGTGTGCCGTGAGAAAACAAGACTCAAAACGCAACATTTGAAGGGCAAACCTAACCAAGAGAACATCGGCAGGCA 43 15810710 0.952560008 14 41 179 0.970588235 1.51851394 0.441176471 0.441860465 0.647058824 43 1 1 66 3L:15810586-15810734 7 23.5 2548 FBgn0261722 816.3866667 52.16 79.50666667 0.028785379 0.45053681 0.295572698 2 2 2 0.01 dme-miR-1007-3p 6mer3-8 TGAGCT 3L 15819668 15819673 - 3L_15819668_15819673_- 1 1 1 0 DCP2 FBtr0304975 15818732 15821444 3L - 15819614 15819675 3'utr DCP2 FlyBase G37007.1 AATGAGCTGCAAATCTGTTTTAAACACTTCTCTCCTTATTTGGATTTGGATTATACTTCATT 12 15819662 0.954452978 3 12 111 1 1.176091259 0.333333333 0.25 0.4 12 0 0 15 3L:15819614-15819675 6 DCP2 FBtr0304975 15818732 15821444 TGAGCT 6mer3-8 dme-miR-1007-3p 3L - 15819636 15819678 3'utr DCP2 FlyBase G27946.1 CTTAATGAGCTGCAAATCTGTTTTAAACACTTCTCTCCTTATT 10 15819662 0.801532965 4 9 77 0.9375 1.176091259 0.5 0.4 0.625 10 1 0 15 3L:15819636-15819678 6 8.5 2549 FBgn0036534 5151.046667 115.94 176.9933333 0.00165015 0.073313783 0.048024408 -11 -11 -11 0.01 dme-miR-317-3p 8mer-A1 TGTGTTCA 3L 15819805 15819812 - 3L_15819805_15819812_- 0.631136783 0.631136783 0.631136783 0 DCP2 FBtr0304975 15818732 15821444 3L - 15819766 15820013 3'utr DCP2 FlyBase G37008.1 TTCCTATAATTCGTAAGCATGTCACGTTAGCATGTTAACTAATTCCTCCTTCAAACGTAGTCTCCAATGTGTGAAACAGTTGCCTATTAGCGTTTATCTTTAGACTAAGCAATGACCAGCAATGTCTCCAAGGTGGTAACATCAGAGCCAATAGGTTTACATCACCGAAAATCAAAAGAAGTTCCCTGTAACTCGGCCTTTTGTGTTCAATTCGAAAGTAGTTCTCTAAGCGTATCGGCCGAAAACAG 66 15819813 0.980954254 24 63 582 0.960526316 1.86332286 0.105263158 0.136363636 0.25 66 3 0 73 3L:15819766-15820013 8 DCP2 FBtr0304975 15818732 15821444 TGTGTTCA 8mer-A1 dme-miR-317-3p 3L - 15819755 15819834 3'utr DCP2 FlyBase G27947.1 AGTTCCCTGTAACTCGGCCTTTTGTGTTCAATTCGAAAGTAGTTCTCTAAGCGTATCGGCCGAAAACAGTAAGAAATTTG 24 15819813 0.987805672 9 24 214 1 1.544068044 0.228571429 0.333333333 0.542857143 24 0 0 35 3L:15819755-15819834 8 22 2550 FBgn0036534 5151.046667 115.94 176.9933333 0.004270977 0.189753321 0.124298467 1 1 1 0.01 dme-miR-980-3p 6mer3-8 GGCAGC 3L 15820319 15820324 - 3L_15820319_15820324_- 1 0.999974675 0.999987338 1.79E-05 DCP2 FBtr0304975 15818732 15821444 3L - 15820283 15820383 3'utr DCP2 FlyBase G37010.1 ACACCGTTCGAAATGAAGAGCCACTTTCCCACAATCAGGGGCAATATCAGGCATATCTCGGCAGCAAAGTGTTTCGTCAATTTTTGATTGACCACTTGGGA 20 15820327 0.942434576 8 16 71 0.791666667 0.801632346 0.083333333 0.2 0.333333333 20 3 2 19 3L:15820283-15820383 6 DCP2 FBtr0304975 15818732 15821444 GGCAGC 6mer3-8 dme-miR-980-3p 3L - 15820265 15820347 3'utr DCP2 FlyBase G27950.1 AGGGGCAATATCAGGCATATCTCGGCAGCAAAGTGTTTCGTCAATTTTTGATTGACCACTTGGGAATGGGATTGTGAAGCTAA 15 15820328 0.973641092 9 12 78 0.857142857 0.77815125 0.238095238 0.266666667 0.476190476 15 1 2 18 3L:15820265-15820347 6 12 2551 FBgn0036534 5151.046667 115.94 176.9933333 0.002329624 0.103501811 0.067799164 3 4 3.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 3L 15820468 15820473 - 3L_15820468_15820473_- 0.999999983 0.999998005 0.999998994 1.41E-06 DCP2 FBtr0304975 15818732 15821444 3L - 15820417 15820518 3'utr DCP2 FlyBase G37011.1 AATGTAAATAATTAAATTGTGATATAGTATTTCTTAGCACAATTGTGATCTTAGCAAACGGCTGGCAACTACAAAAACTTTTATAAGCGCAACCACAACACC 663 15820469 0.981746994 17 638 4683 0.958083832 1.823908741 0.032335329 0.214177979 0.376047904 663 24 11 800 3L:15820417-15820518 6 DCP2 FBtr0304975 15818732 15821444 TGATCT 6mer3-8 dme-bantam-3p 3L - 15820439 15820619 3'utr DCP2 FlyBase G27951.1 AAATAATATTTCCGGGCCGTATTACTTACTGCCCGCCCCCACCTATGAAAGTTAGACGAGAGAGGAGAGAAAGATGTGTAAGAAATATTACAAATAATAACAATGTAAATAATTAAATTGTGATATAGTATTTCTTAGCACAATTGTGATCTTAGCAAACGGCTGGCAACTACAAAAACTT 500 15820468 0.966631548 27 476 3364 0.951822917 1.96082739 0.029947917 0.406 0.61328125 500 30 7 731 3L:15820439-15820619 6 379.5 2552 FBgn0036534 5151.046667 115.94 176.9933333 0.073674347 3.273244782 2.144148556 -4 -5 -4.5 0.01 dme-miR-1003-3p 6mer2-7 TGTGAG 3L 15820828 15820833 - 3L_15820828_15820833_- 1 0.999999994 0.999999997 0 DCP2 FBtr0304975 15818732 15821444 3L - 15820765 15820846 3'utr DCP2 FlyBase G37016.1 TAAAAGTGTTTATTGTGAGCCTAGTGAACCTAGCCTACTTCAAGCAGAGTGCTCGCCGTTGAACGTATTTTTAGAGAAACCA 26 15820834 0.877724201 9 21 165 0.857142857 1.380211242 0.214285714 0.076923077 0.142857143 26 4 0 24 3L:15820765-15820846 6 DCP2 FBtr0304975 15818732 15821444 TGTGAG 6mer2-7 dme-miR-1003-3p 3L - 15820763 15820843 3'utr DCP2 FlyBase G27953.1 AAGTGTTTATTGTGAGCCTAGTGAACCTAGCCTACTTCAAGCAGAGTGCTCGCCGTTGAACGTATTTTTAGAGAAACCAAC 16 15820834 0.949124334 7 14 118 0.85 0.62838893 0.35 0.25 0.4 16 0 3 17 3L:15820763-15820843 6 6.5 2553 FBgn0036534 5151.046667 115.94 176.9933333 0.001261879 0.056063481 0.036724547 1 1 1 0.01 dme-miR-8-3p 7mer-A1 AGTATTA 3L 15830812 15830818 + 3L_15830812_15830818_+ 0.823349562 0.823349562 0.823349562 0 dbo FBtr0075505|FBtr0332133 15830491|15830602 15832004|15831660 3L + 15830770 15830890 3'utr dbo FlyBase G30648.1 TGGTAGAGCCTAAAGCGCATGTTTGTTAGACTTTTCCGGAATAGTATTAGAGTTAGCATTGTTCCCACGTTCACCTGCAATAACACATCCCCATCACTCCTGTGCGTAATTATATATGATT 57 15830803 0.88690586 15 56 508 0.985507246 1.832508913 0.115942029 0.192982456 0.333333333 57 1 0 68 3L:15830770-15830890 7 dbo FBtr0075505|FBtr0332133 15830491|15830602 15832004|15831660 AGTATTA 7mer-A1 dme-miR-8-3p 3L + 15830773 15830828 3'utr dbo FlyBase G23180.1 TAGAGCCTAAAGCGCATGTTTGTTAGACTTTTCCGGAATAGTATTAGAGTTAGCAT 37 15830803 0.987078166 11 35 316 1 1.770852012 0.305084746 0.324324324 0.576271186 37 0 0 59 3L:15830773-15830828 7 15 2554 FBgn0040230 498.9366667 16.79 25.68 0.030063936 0.893388922 0.58411215 9 9 9 0.01 dme-miR-34-5p 6mer3-8 CACTGC 3L 15834153 15834158 - 3L_15834153_15834158_- 1 1 1 0 CG18081 FBtr0332134|FBtr0306855|FBtr0075537 15834074|15833793|15834074 15834361|15834361|15834361 3L - 15834137 15834165 3'utr CG18081 FlyBase G37041.1 ATATACACACTGCTGACTTTTGGTTTATA 5 15834147 0.660892426 3 4 38 0.8 0.602059991 0 0 0 5 1 0 4 3L:15834137-15834165 6 CG18081 FBtr0075537|FBtr0306855|FBtr0332134 15834074|15833793|15834074 15834361|15834361|15834361 CACTGC 6mer3-8 dme-miR-34-5p 3L - 15834123 15834161 3'utr CG18081 FlyBase G27970.1 ACACACTGCTGACTTTTGGTTTATACTTTGAAAATAACA 7 15834146 0.930443689 4 6 63 0.75 0.77815125 0.5 0.142857143 0.25 7 2 0 6 3L:15834123-15834161 6 5 2555 FBgn0036537 1496.33 267.3833333 411.1366667 0.003341509 0.018699744 0.012161406 -11 -12 -11.5 0.01 dme-miR-14-3p 6mer2-7 AGACTG 3L 15956218 15956223 + 3L_15956218_15956223_+ 1 1 1 0 GXIVsPLA2 FBtr0075509|FBtr0273189|FBtr0333572 15956052|15955390|15956052 15956252|15956252|15956465 3L + 15956181 15956253 3'utr GXIVsPLA2 FlyBase G30661.1 CATTATTGTATACCAAATAGTGGCATGCCAACGGTCCAGACTGTTAAATACATTGATATTTTTACCTATTATA 71 15956224 0.711175127 9 66 364 0.931034483 1.607455023 0.091954023 0.197183099 0.344827586 71 5 1 81 3L:15956181-15956253 6 GXIVsPLA2 FBtr0333572|FBtr0273189 15956052|15955390 15956465|15956252 AGACTG 6mer2-7 dme-miR-14-3p 3L + 15956187 15956265 3'utr GXIVsPLA2 FlyBase G23193.1 TGTATACCAAATAGTGGCATGCCAACGGTCCAGACTGTTAAATACATTGATATTTTTACCTATTATAAAGATGCTATAT 46 15956224 0.723541952 9 43 233 0.897058824 1.785329835 0.014705882 0.347826087 0.558823529 46 7 0 61 3L:15956187-15956265 6 52 2556 FBgn0036545 264.6666667 31.66 47.96 0.196473552 1.642451042 1.084236864 -6 -6 -6 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 3L 15958136 15958142 + 3L_15958136_15958142_+ 0.782911824 0.782911824 0.782911824 0 elgi FBtr0075510|FBtr0333573 15957969|15957969 15958433|15958433 3L + 15958106 15958149 3'utr elgi FlyBase G30668.1 ATTCAAGCGCCTCATGACGACTTTCAAGTTGTACAAAAAATATA 8 15958134 0.967598524 2 8 44 1 1.113943352 0 0.375 0.615384615 8 0 0 13 3L:15958106-15958149 7 elgi FBtr0075510|FBtr0333573 15957969|15957969 15958433|15958433 GTACAAA 7mer-A1 dme-miR-305-5p 3L + 15958096 15958149 3'utr elgi FlyBase G23199.1 AAAACAAACCATTCAAGCGCCTCATGACGACTTTCAAGTTGTACAAAAAATATA 5 15958134 0.9768065 3 5 32 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3L:15958096-15958149 7 5.5 2557 FBgn0036546 86 6.756666667 10.27666667 0.063953488 0.814010853 0.535192994 2 2 2 0.01 dme-bantam-3p 7mer-A1 GATCTCA 3L 15958253 15958259 + 3L_15958253_15958259_+ 0.823349562 0.823349562 0.823349562 0 elgi FBtr0075510|FBtr0333573 15957969|15957969 15958433|15958433 3L + 15958240 15958274 3'utr elgi FlyBase G30669.1 TGTTTGATTAAGCGATCTCAACAAATGTCCCTTTG 12 15958247 0.75025161 4 12 79 1 1.255272505 0.111111111 0.416666667 0.611111111 12 0 0 18 3L:15958240-15958274 7 elgi FBtr0075510|FBtr0333573 15957969|15957969 15958433|15958433 GATCTCA 7mer-A1 dme-bantam-3p 3L + 15958242 15958326 3'utr elgi FlyBase G23200.1 TTTGATTAAGCGATCTCAACAAATGTCCCTTTGTTATCGTTCACTTCATTCTCATTTTGATGGAAGGAAGCTGTGAATGTCCTAA 14 15958247 0.977812943 6 11 79 0.904761905 1.278753601 0.142857143 0.5 0.666666667 14 2 0 19 3L:15958242-15958326 7 9.5 2558 FBgn0036546 86 6.756666667 10.27666667 0.110465116 1.406018747 0.924424262 6 6 6 0.01 dme-miR-968-5p 7mer-m8 ACTACTT 3L 15960891 15960897 - 3L_15960891_15960897_- 0.63152523 0.631525296 0.631525263 7.07E-08 l(3)72Ab FBtr0075527 15960834 15960993 3L - 15960862 15960958 3'utr l(3)72Ab FlyBase G37050.1 AAATGAAAATCAATCATTTTACAATTTACGCGCATTAATTGTAGCAATAATAAATTCGTGTACTACTTTAGTAGAAACCAAATTGTACAAGGATACA 29 15960900 0.979470124 8 28 226 0.971428571 1.230448921 0 0.206896552 0.342857143 29 0 1 34 3L:15960862-15960958 7 l(3)72Ab FBtr0075527 15960834 15960993 ACTACTT 7mer-m8 dme-miR-968-5p 3L - 15960877 15960910 3'utr l(3)72Ab FlyBase G27974.1 AATAAATTCGTGTACTACTTTAGTAGAAACCAAA 10 15960900 0.807530463 2 9 74 1 1.113943352 0 0.3 0.461538462 10 0 0 13 3L:15960877-15960910 7 15.5 2559 FBgn0263599 2057.39 37.04 56.85333333 0.007533817 0.418466523 0.272631332 3 3 3 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3L 15984328 15984333 + 3L_15984328_15984333_+ 1 1 1 0 Arl1 FBtr0075517 15984183 15984362 3L + 15984202 15984362 3'utr Arl1 FlyBase G30679.1 AGACCCCCAGATCCCTGTGTAAAAAATGTGTGTCCAAAGCATCGCCAGCTAGGGAACGTCAACAGCTTTTTTCAAATTGCAGATTGCGCAAAAAATCCACGAACCGAAAGAAACTTTGTAATAACTTCTAGTAATATAATTATTAAATTATAGGATTAAAC 28 15984317 0.974372106 15 26 162 0.944444444 1.531478917 0.083333333 0.178571429 0.361111111 28 2 0 34 3L:15984202-15984362 6 Arl1 FBtr0075517 15984183 15984362 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 15984300 15984344 3'utr Arl1 FlyBase G23208.1 ACGAACCGAAAGAAACTTTGTAATAACTTCTAGTAATATAATTAT 6 15984317 0.979140454 3 6 41 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3L:15984300-15984344 6 5.5 2560 FBgn0000115 423.9933333 62.03666667 94.69666667 0.012971902 0.088657246 0.058080186 11 11 11 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3L 15991617 15991622 + 3L_15991617_15991622_+ 1 1 1 0 Hip14 FBtr0075518|FBtr0333577|FBtr0330161 15990856|15990856|15990910 15991640|15992464|15991640 3L + 15991555 15991633 3'utr Hip14 FlyBase G30692.1 ACGCAACCTTCACAGCCGACAGCTCTCTAGGATCGACTACTTCGCTTCGGGAACGGCACGCAAAGACTTTTCAAATATC 21 15991624 0.92534402 4 20 72 0.956521739 1.342422681 0 0.095238095 0.173913043 21 1 0 22 3L:15991555-15991633 6 Hip14 FBtr0330161|FBtr0333577|FBtr0075518 15990910|15990856|15990856 15991640|15992464|15991640 AAGACT 6mer3-8 dme-miR-14-3p 3L + 15991561 15991629 3'utr Hip14 FlyBase G23217.1 CCTTCACAGCCGACAGCTCTCTAGGATCGACTACTTCGCTTCGGGAACGGCACGCAAAGACTTTTCAAA 20 15991624 0.931736388 3 19 75 0.931034483 1.431363764 0.034482759 0.3 0.517241379 20 2 0 27 3L:15991561-15991629 6 17.5 2561 FBgn0259824 761.04 23.55 36.16 0.022994849 0.743099788 0.483960177 -7 -7 -7 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3L 15991750 15991755 + 3L_15991750_15991755_+ 0.999999906 0.9965388 0.998269353 0.002447367 Hip14 FBtr0333577 15990856 15992464 3L + 15991741 15991780 3'utr Hip14 FlyBase G30694.1 AATTATGCACTAGTCTAGTCAGAAAATTATTTAAGTAAAA 29 15991751 0.716583706 8 25 207 0.875 1.447158031 0.125 0.103448276 0.1875 29 4 0 28 3L:15991741-15991780 6 Hip14 FBtr0333577 15990856 15992464 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3L + 15991738 15991804 3'utr Hip14 FlyBase G23218.1 TCTAATTATGCACTAGTCTAGTCAGAAAATTATTTAAGTAAAATGTTAAAGTGCAACTACAGCCACA 25 15991752 0.819522677 9 23 148 0.888888889 1.505149978 0.027777778 0.32 0.527777778 25 4 0 32 3L:15991738-15991804 6 23.5 2562 FBgn0259824 761.04 23.55 36.16 0.030878797 0.997876858 0.649889381 -1 -2 -1.5 0.01 dme-miR-2535b-3p 7mer-m1 CGTGAGT 3L 15993821 15993827 - 3L_15993821_15993827_- 0.659126002 0.765586663 0.712356333 0.075279083 CG5830 FBtr0333579|FBtr0075521 15992667|15992667 15994730|15994730 3L - 15993754 15993851 3'utr CG5830 FlyBase G37114.1 TGGTTTCCTGAAATGTCTCTCAGTCGTGAGTGGGATTGGGCCGCGCTTAAAGCAGCCAAGTTGCATTGCAAGAGGGTGAAAATGGGCTATCTGTAAGC 17 15993815 0.969120031 7 17 100 1 1.278753601 0.105263158 0.117647059 0.210526316 17 0 0 19 3L:15993754-15993851 7 CG5830 FBtr0333579|FBtr0075521 15992667|15992667 15994730|15994730 CGTGAGT 7mer-m1 dme-miR-2535b-3p 3L - 15993800 15993894 3'utr CG5830 FlyBase G28015.1 TATATCGGGTTTGTCGCATAAATGGCTTCATCGTATCACATTCTGGTTTCCTGAAATGTCTCTCAGTCGTGAGTGGGATTGGGCCGCGCTTAAAG 9 15993816 0.97919042 7 7 57 0.923076923 1.079181246 0.076923077 0.444444444 0.615384615 9 1 0 12 3L:15993800-15993894 7 6 2563 FBgn0036556 753.23 25.73 39.48333333 0.007965694 0.233190828 0.151962854 -12 -11 -11.5 0.01 dme-miR-190-5p 6mer3-8 ACATAT 3L 15994229 15994234 - 3L_15994229_15994234_- 1 1 1 0 CG5830 FBtr0333579|FBtr0075521 15992667|15992667 15994730|15994730 3L - 15994190 15994246 3'utr CG5830 FlyBase G37115.1 AATGATAACTATACATATGAACAGAGAGATAAAATCAAATTCAAAATAGCTATATTT 6 15994207 0.963367429 3 5 28 0.857142857 0.77815125 0.142857143 0.166666667 0.285714286 6 1 0 6 3L:15994190-15994246 6 CG5830 FBtr0333579|FBtr0075521 15992667|15992667 15994730|15994730 ACATAT 6mer3-8 dme-miR-190-5p 3L - 15994203 15994237 3'utr CG5830 FlyBase G28016.1 TATACATATGAACAGAGAGATAAAATCAAATTCAA 8 15994217 0.728051849 5 7 26 0.941176471 1.204119983 0.529411765 0.5 0.764705882 8 1 0 16 3L:15994203-15994237 6 3.5 2564 FBgn0036556 753.23 25.73 39.48333333 0.004646655 0.136027983 0.088644998 -27 -17 -22 0.01 dme-miR-283-5p 6mer3-8 TGATAT 3L 15994508 15994513 - 3L_15994508_15994513_- 1 1 1 0 CG5830 FBtr0333579|FBtr0075521 15992667|15992667 15994730|15994730 3L - 15994469 15994525 3'utr CG5830 FlyBase G37117.1 ATAAGTTTTATATGATATACATAATTTTTACAGAACCCAATTTACACGGCACATTTG 13 15994510 0.857443896 3 12 118 0.933333333 0.84509804 0 0.153846154 0.266666667 13 0 1 14 3L:15994469-15994525 6 CG5830 FBtr0333579|FBtr0075521 15992667|15992667 15994730|15994730 TGATAT 6mer3-8 dme-miR-283-5p 3L - 15994473 15994523 3'utr CG5830 FlyBase G28017.1 AAGTTTTATATGATATACATAATTTTTACAGAACCCAATTTACACGGCACA 13 15994510 0.895769881 4 13 98 1 1.322219295 0.095238095 0.615384615 0.761904762 13 0 0 21 3L:15994473-15994523 6 8 2565 FBgn0036556 753.23 25.73 39.48333333 0.010620926 0.310921104 0.202617138 -3 -3 -3 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3L 1600049 1600055 + 3L_1600049_1600055_+ 0.823349562 0.823349562 0.823349562 0 CG13917 FBtr0072747|FBtr0333359|FBtr0347066|FBtr0303993 1599860|1599860|1599860|1599860 1600845|1600845|1600845|1600320 3L + 1600013 1600060 3'utr CG13917 FlyBase G27171.1 CCGGATCCAGAACCGTACACGTCCCATAAGGCAACACTAGTCAATAAT 5 1600039 0.851112151 3 5 15 1 0.698970004 0.4 0 0 5 0 0 5 3L:1600013-1600060 7 CG13917 FBtr0303993|FBtr0347066|FBtr0333359|FBtr0072747 1599860|1599860|1599860|1599860 1600320|1600845|1600845|1600845 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L + 1600021 1600065 3'utr CG13917 FlyBase G20572.1 AGAACCGTACACGTCCCATAAGGCAACACTAGTCAATAATCTAGC 7 1600057 0.920487318 3 6 23 1 0.954242509 0 0.142857143 0.333333333 7 0 0 9 3L:1600021-1600065 7 4.5 2566 FBgn0035237 346.41 5.056666667 7.816666667 0.012990387 0.889914305 0.575692964 10 -8 1 0.01 dme-miR-970-3p 6mer3-8 TCTTAT 3L 16006592 16006597 - 3L_16006592_16006597_- 1 1 1 0 mib1 FBtr0075520|FBtr0333578 16006550|16006550 16006732|16006732 3L - 16006576 16006625 3'utr mib1 FlyBase G37128.1 TCATATATATAACTATATATCGGATTGGTCTTATAAAGCAAAAATATATT 55 16006601 0.984003367 4 55 461 1 1.84509804 0.014285714 0.236363636 0.4 55 0 0 70 3L:16006576-16006625 6 mib1 FBtr0075520|FBtr0333578 16006550|16006550 16006732|16006732 TCTTAT 6mer3-8 dme-miR-970-3p 3L - 16006576 16006626 3'utr mib1 FlyBase G28027.1 ATCATATATATAACTATATATCGGATTGGTCTTATAAAGCAAAAATATATT 47 16006601 0.983104436 3 47 377 1 1.880813592 0 0.446808511 0.657894737 47 0 0 76 3L:16006576-16006626 6 51 2567 FBgn0263601 566.1 17.78333333 27.41 0.09009009 2.867853796 1.860634805 4 4 4 0.01 dme-miR-970-3p 6mer3-8 TCTTAT 3L 16006650 16006655 - 3L_16006650_16006655_- 1 1 1 0 mib1 FBtr0075520|FBtr0333578 16006550|16006550 16006732|16006732 3L - 16006644 16006694 3'utr mib1 FlyBase G37129.1 ACAGCCTTCGAAGTATTAGGATATTTAAAGGACTCACATTCTTATACACAC 15 16006656 0.738583091 4 12 72 0.882352941 0.698970004 0.058823529 0.214285714 0.352941176 14 0 2 15 3L:16006644-16006694 6 mib1 FBtr0075520|FBtr0333578 16006550|16006550 16006732|16006732 TCTTAT 6mer3-8 dme-miR-970-3p 3L - 16006630 16006669 3'utr mib1 FlyBase G28028.1 TAAAGGACTCACATTCTTATACACACATATATACACACAC 18 16006656 0.9697424 2 17 90 0.961538462 1.397940009 0 0.333333333 0.538461538 18 1 0 25 3L:16006630-16006669 6 12.5 2568 FBgn0263601 566.1 17.78333333 27.41 0.022080904 0.702905342 0.456037942 1 1 1 0.01 dme-miR-277-3p 6mer2-7 GCATTT 3L 1600986 1600991 - 3L_1600986_1600991_- 1 1 1 0 CG12104 FBtr0072825|FBtr0333360|FBtr0344803 1600940|1600724|1600940 1601267|1601267|1601267 3L - 1600960 1601001 3'utr CG12104 FlyBase G33389.1 AATTTACAAAGCATTTGGTATGAGGCCCAATTAATACTAATT 17 1600982 0.862497473 4 17 112 1 1.342422681 0 0.235294118 0.409090909 17 0 0 22 3L:1600960-1601001 6 CG12104 FBtr0344803|FBtr0333360|FBtr0072825 1600940|1600724|1600940 1601267|1601267|1601267 GCATTT 6mer2-7 dme-miR-277-3p 3L - 1600971 1601002 3'utr CG12104 FlyBase G25255.1 GAATTTACAAAGCATTTGGTATGAGGCCCAAT 8 1600982 0.938869191 4 7 45 1 1.113943352 0.153846154 0.375 0.615384615 8 0 0 13 3L:1600971-1601002 6 12 2569 FBgn0035238 425.3866667 44.73 68.24666667 0.028209629 0.268276325 0.175832764 -9 -9 -9 0.01 dme-miR-318-3p 6mer3-8 CCCAGT 3L 16031831 16031836 + 3L_16031831_16031836_+ 0.999905252 1 0.999952626 6.70E-05 Notum FBtr0075435 16031340 16032752 3L + 16031801 16031840 3'utr Notum FlyBase G30706.1 ACACCAAGAAGAAAAGACATGCGCATAGTACCCAGTAATT 13 16031820 0.948337673 2 13 25 1 1.113943352 0.230769231 0 0 13 0 0 13 3L:16031801-16031840 6 Notum FBtr0075435 16031340 16032752 CCCAGT 6mer3-8 dme-miR-318-3p 3L + 16031795 16031836 3'utr Notum FlyBase G23226.1 TAGAACACACCAAGAAGAAAAGACATGCGCATAGTACCCAGT 10 16031820 0.891483423 3 10 21 1 1.204119983 0.25 0.5 0.6875 10 0 0 16 3L:16031795-16031836 6 6 2570 FBgn0044028 1178.056667 37.54333333 57.65 0.005093134 0.159815325 0.104076323 11 11 11 0.01 dme-miR-14-3p 7mer-m8 AAGACTG 3L 16032018 16032024 + 3L_16032018_16032024_+ 0.671795832 0.671795832 0.671795832 0 Notum FBtr0075435 16031340 16032752 3L + 16031971 16032032 3'utr Notum FlyBase G30708.1 AAGAAATGAAATCTGCTTAACGAGAAACTAAACACAAATGCAACCACAAGACTGTTTTTATG 150 16032025 0.892442159 11 147 748 0.974619289 2.283301229 0.025380711 0.246666667 0.426395939 150 5 0 192 3L:16031971-16032032 7 Notum FBtr0075435 16031340 16032752 AAGACTG 7mer-m8 dme-miR-14-3p 3L + 16031969 16032032 3'utr Notum FlyBase G23228.1 CAAAGAAATGAAATCTGCTTAACGAGAAACTAAACACAAATGCAACCACAAGACTGTTTTTATG 109 16032025 0.819916531 9 105 582 0.96969697 2.204119983 0.048484848 0.403669725 0.606060606 109 5 0 160 3L:16031969-16032032 7 112 2571 FBgn0044028 1178.056667 37.54333333 57.65 0.095071827 2.983219391 1.942758023 -7 -7 -7 0.01 dme-miR-14-3p 6mer2-7 AGACTG 3L 16032172 16032177 + 3L_16032172_16032177_+ 1 1 1 0 Notum FBtr0075435 16031340 16032752 3L + 16032126 16032196 3'utr Notum FlyBase G30709.1 TTGATAGTTTATGACCCGTTTAGGATTTTACTTGTGTGTGGAATCTAGACTGTTTCAAATGCCCCACGCAT 66 16032178 0.672011488 11 61 544 0.965116279 1.618048097 0.104651163 0.227272727 0.406976744 66 2 1 83 3L:16032126-16032196 6 Notum FBtr0075435 16031340 16032752 AGACTG 6mer2-7 dme-miR-14-3p 3L + 16032121 16032196 3'utr Notum FlyBase G23229.1 TTTATTTGATAGTTTATGACCCGTTTAGGATTTTACTTGTGTGTGGAATCTAGACTGTTTCAAATGCCCCACGCAT 53 16032178 0.930040603 12 49 453 0.925925926 1.875061263 0.135802469 0.41509434 0.617283951 53 6 0 75 3L:16032121-16032196 6 46.5 2572 FBgn0044028 1178.056667 37.54333333 57.65 0.039471785 1.238568765 0.8065915 -6 -6 -6 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3L 16032344 16032350 + 3L_16032344_16032350_+ 0.808818622 0.808818618 0.80881862 0 Notum FBtr0075435|FBtr0075435 16031340|16031340 16032752|16032752 3L + 16032340 16032382 3'utr Notum FlyBase G30711.1 TTAATACTTAACTTAATACCGCCCGCATTCCGTTAAATAAAGA 8 16032356 0.796047769 3 8 49 1 1.041392685 0 0.375 0.545454545 8 0 0 11 3L:16032340-16032382 7 Notum FBtr0075435|FBtr0075435 16031340|16031340 16032752|16032752 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3L + 16032241 16032368 3'utr Notum FlyBase G23230.1 ATTTATTTTGTACCTACCTCAGATCAGTAAGAATGAATGAAATTGATAAACAGCTGCCTTCACATATCATTGCGTACCTGTGCAACGAAAATCAAATACTTAATACTTAACTTAATACCGCCCGCATT 39 16032356 0.922475075 12 38 215 0.983606557 1.77815125 0.098360656 0.461538462 0.655737705 39 1 0 60 3L:16032241-16032368 7 8.5 2573 FBgn0044028 1178.056667 37.54333333 57.65 0.007215273 0.226405043 0.147441457 -12 -12 -12 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 16032591 16032598 + 3L_16032591_16032598_+ 0.500120318 0.500120318 0.500120318 0 Notum FBtr0075435 16031340 16032752 3L + 16032548 16032666 3'utr Notum FlyBase G30712.1 AAGCCTGTACAGAACTGGTTGAAGTTTAGCCCTAAGAATTGTTGTACTTAAACTTAGTGATAATCATAAACGTAATGCAATTCGCAAGCTTATTAGCTTTTGTTAGCGTTCTTCAAATG 87 16032590 0.972755261 10 82 776 0.951923077 1.995635195 0.115384615 0.16091954 0.298076923 87 5 0 99 3L:16032548-16032666 8 Notum FBtr0075435 16031340 16032752 GTACTTAA 8mer-A1 dme-miR-252-5p 3L + 16032544 16032617 3'utr Notum FlyBase G23231.1 TGCTAAGCCTGTACAGAACTGGTTGAAGTTTAGCCCTAAGAATTGTTGTACTTAAACTTAGTGATAATCATAAA 58 16032590 0.75971643 8 57 519 0.97752809 1.939519253 0.078651685 0.396551724 0.606741573 58 2 0 87 3L:16032544-16032617 8 61 2574 FBgn0044028 1178.056667 37.54333333 57.65 0.051780192 1.624789133 1.05810928 1 1 1 0.01 dme-miR-1007-3p 6mer3-8 TGAGCT 3L 16079246 16079251 + 3L_16079246_16079251_+ 1 1 1 0 Mbs FBtr0333616|FBtr0308216|FBtr0075441 16078935|16063314|16078935 16079589|16079589|16079589 3L + 16079226 16079279 3'utr Mbs FlyBase G30734.1 AGCTAAAATTAAGTTCACATTGAGCTCATTGGCTTTGGACTGGTCACTGGTAAT 26 16079245 0.927387724 5 26 199 1 1.491361694 0.419354839 0.192307692 0.322580645 26 0 0 31 3L:16079226-16079279 6 Mbs FBtr0308216|FBtr0075441|FBtr0333616 16063314|16078935|16078935 16079589|16079589|16079589 TGAGCT 6mer3-8 dme-miR-1007-3p 3L + 16079231 16079268 3'utr Mbs FlyBase G23250.1 AAATTAAGTTCACATTGAGCTCATTGGCTTTGGACTGG 15 16079245 0.813225365 2 15 104 1 1.230448921 0.705882353 0.133333333 0.235294118 15 0 0 17 3L:16079231-16079268 6 20.5 2575 FBgn0005536 2947.596667 72.49666667 111.4433333 0.006954819 0.282771622 0.18394999 1 1 1 0.01 dme-miR-1003-3p 7mer-A1 TGTGAGA 3L 16081969 16081975 + 3L_16081969_16081975_+ 0.823349562 0.823349562 0.823349562 0 Mbs FBtr0112852|FBtr0112851|FBtr0301575|FBtr0301473|FBtr0308213|FBtr0308214|FBtr0301472|FBtr0308215|FBtr0112850 16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844 16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026 3L + 16081862 16081986 3'utr Mbs FlyBase G30741.2 CTGTTATTTATTAAATTCGCCTAAGAGATTTTGTGTTACTCGTAAATGGAAACGATAATCAAGCATAAACAACCATAAGAACGTGAATTGTGTAATATGTAAAATTGTGTGAGAAAATATTTATG 128 16081967 0.741365912 19 120 976 0.97260274 1.851258349 0.164383562 0.134920635 0.253424658 126 3 1 142 3L:16081862-16081986 7 Mbs FBtr0301472|FBtr0308215|FBtr0112850|FBtr0308214|FBtr0301473|FBtr0308213|FBtr0112852|FBtr0112851|FBtr0301575 16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844 16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026 TGTGAGA 7mer-A1 dme-miR-1003-3p 3L + 16081929 16082033 3'utr Mbs FlyBase G23257.1 AACAACCATAAGAACGTGAATTGTGTAATATGTAAAATTGTGTGAGAAAATATTTATGAAAATTTGATTCAAATACGAAACTTAATAAATGTGATCGCAAGCAAA 94 16081967 0.803345873 11 91 629 0.970149254 2.113943352 0.052238806 0.35106383 0.544776119 94 4 0 130 3L:16081929-16082033 7 58 2576 FBgn0005536 2947.596667 72.49666667 111.4433333 0.019677048 0.800036783 0.520443873 2 2 2 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 16082018 16082023 + 3L_16082018_16082023_+ 0.730949445 0.730949445 0.730949445 0 Mbs FBtr0112852|FBtr0112852|FBtr0112852|FBtr0112851|FBtr0112851|FBtr0112851|FBtr0301575|FBtr0301575|FBtr0301575|FBtr0301473|FBtr0301473|FBtr0301473|FBtr0308213|FBtr0308213|FBtr0308213|FBtr0308214|FBtr0308214|FBtr0308214|FBtr0301472|FBtr0301472|FBtr0301472|FBtr0308215|FBtr0308215|FBtr0308215|FBtr0112850|FBtr0112850|FBtr0112850 16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844 16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026 3L + 16081988 16082033 3'utr Mbs FlyBase G30741.3 AAATTTGATTCAAATACGAAACTTAATAAATGTGATCGCAAGCAAA 84 16082014 0.791304106 7 80 450 0.96 1.380211242 0.05 0.154761905 0.29 84 1 3 96 3L:16081988-16082033 6 Mbs FBtr0301472|FBtr0301472|FBtr0301472|FBtr0308215|FBtr0308215|FBtr0308215|FBtr0112850|FBtr0112850|FBtr0112850|FBtr0308214|FBtr0308214|FBtr0308214|FBtr0301473|FBtr0301473|FBtr0301473|FBtr0308213|FBtr0308213|FBtr0308213|FBtr0112852|FBtr0112852|FBtr0112852|FBtr0112851|FBtr0112851|FBtr0112851|FBtr0301575|FBtr0301575|FBtr0301575 16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844 16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 16081929 16082033 3'utr Mbs FlyBase G23257.1 AACAACCATAAGAACGTGAATTGTGTAATATGTAAAATTGTGTGAGAAAATATTTATGAAAATTTGATTCAAATACGAAACTTAATAAATGTGATCGCAAGCAAA 94 16082014 0.803345873 11 91 629 0.970149254 2.113943352 0.052238806 0.35106383 0.544776119 94 4 0 130 3L:16081929-16082033 6 60 2577 FBgn0005536 2947.596667 72.49666667 111.4433333 0.020355567 0.827624259 0.538390213 4 4 4 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 16088030 16088035 - 3L_16088030_16088035_- 1 1 1 0 CG5235 FBtr0333599|FBtr0075497 16087815|16087625 16088100|16088100 3L - 16087993 16088083 3'utr CG5235 FlyBase G37169.1 AAGTATTATTTAAGCCATCCAAAACGTTTTCAGTGAAAATGCTAGCTTACCAAATGAACGATTATCAAATATTCAAAATTATTCTCGTAAT 50 16088036 0.959429883 6 49 242 0.969230769 1.799340549 0.123076923 0.24 0.415384615 50 2 0 63 3L:16087993-16088083 6 CG5235 FBtr0333599|FBtr0075497 16087815|16087625 16088100|16088100 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 16087994 16088058 3'utr CG5235 FlyBase G28067.1 GTTTTCAGTGAAAATGCTAGCTTACCAAATGAACGATTATCAAATATTCAAAATTATTCTCGTAA 36 16088036 0.964036869 8 34 177 0.944444444 1.707570176 0.166666667 0.472222222 0.648148148 36 3 0 51 3L:16087994-16088058 6 39 2578 FBgn0036565 1024 48.82333333 74.77 0.038085938 0.798798389 0.521599572 1 1 1 0.01 dme-bantam-3p 6mer3-8 TGATCT 3L 16095599 16095604 + 3L_16095599_16095604_+ 1 1 1 0 ClC-c FBtr0333598|FBtr0302503|FBtr0075444 16095195|16095195|16095195 16096151|16095854|16095854 3L + 16095564 16095621 3'utr ClC-c FlyBase G30759.1 TATATGTTCACATACAGCTTGATAACACTATGAAATGATCTATAGTTGTAAAAGGAAC 15 16095600 0.742966812 6 15 111 1 1.230448921 0.411764706 0.133333333 0.235294118 15 0 0 17 3L:16095564-16095621 6 ClC-c FBtr0075444|FBtr0302503|FBtr0333598 16095195|16095195|16095195 16095854|16095854|16096151 TGATCT 6mer3-8 dme-bantam-3p 3L + 16095577 16095618 3'utr ClC-c FlyBase G23268.1 ACAGCTTGATAACACTATGAAATGATCTATAGTTGTAAAAGG 12 16095599 0.985004114 3 10 81 0.894736842 1.230448921 0.421052632 0.5 0.684210526 12 2 0 17 3L:16095577-16095618 6 12.5 2579 FBgn0036566 804.2333333 24.65333333 37.96666667 0.015542753 0.507030827 0.329236172 -1 0 -0.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 16095841 16095846 + 3L_16095841_16095846_+ 1 1 1 0 ClC-c FBtr0333598|FBtr0302503|FBtr0075444 16095195|16095195|16095195 16096151|16095854|16095854 3L + 16095742 16095852 3'utr ClC-c FlyBase G30761.1 CTACACAGATAAAATGTCTTGTTTATACAATACATAGTCTATATTTACATGTGGTATTTGTTAGAGATCTGAGAAATTTTAAAATAAAATTGTGTATATACCAAACCTAAG 32 16095831 0.985941492 12 32 280 1 1.62324929 0.047619048 0.1875 0.380952381 32 0 0 42 3L:16095742-16095852 6 ClC-c FBtr0075444|FBtr0302503|FBtr0333598 16095195|16095195|16095195 16095854|16095854|16096151 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 16095770 16095846 3'utr ClC-c FlyBase G23269.1 AATACATAGTCTATATTTACATGTGGTATTTGTTAGAGATCTGAGAAATTTTAAAATAAAATTGTGTATATACCAAA 11 16095831 0.965607776 7 9 104 0.823529412 1.146128036 0.058823529 0.363636364 0.588235294 11 3 0 14 3L:16095770-16095846 6 7.5 2580 FBgn0036566 804.2333333 24.65333333 37.96666667 0.009325652 0.304218496 0.197541703 10 10 10 0.01 dme-miR-7-5p 6mer2-7 TCTTCC 3L 16107184 16107189 - 3L_16107184_16107189_- 1 1 1 0 Zn72D FBtr0333293|FBtr0075493 16106592|16106592 16109613|16109034 3L - 16107158 16107219 3'utr Zn72D FlyBase G37180.1 AGCGCGAGGATCTCACTGTGTCCGCACAGCTCTTCCTGCGCTACATTGCCTTTCGACAGATT 14 16107174 0.850434589 4 13 104 0.882352941 1.176091259 0.352941176 0.214285714 0.352941176 14 2 0 15 3L:16107158-16107219 6 Zn72D FBtr0333293|FBtr0075493 16106592|16106592 16109613|16109034 TCTTCC 6mer2-7 dme-miR-7-5p 3L - 16107156 16107223 3'utr Zn72D FlyBase G28073.1 CAGGAGCGCGAGGATCTCACTGTGTCCGCACAGCTCTTCCTGCGCTACATTGCCTTTCGACAGATTTA 17 16107174 0.967790211 4 16 95 1 1.414973348 0 0.411764706 0.615384615 17 0 0 26 3L:16107156-16107223 6 12 2581 FBgn0263603 1097.933333 38.62 59.09666667 0.010929625 0.310719834 0.203057138 -15 -15 -15 0.01 dme-miR-7-5p 6mer3-8 GTCTTC 3L 16120100 16120105 + 3L_16120100_16120105_+ 1 1 1 0 Taf4 FBtr0075449|FBtr0301911|FBtr0075450|FBtr0075448|FBtr0333291|FBtr0333290|FBtr0114589|FBtr0345951|FBtr0075451 16120071|16120071|16120071|16120071|16120071|16120071|16120071|16120071|16120071 16121368|16121368|16121368|16121651|16121368|16121368|16121368|16121368|16121368 3L + 16120033 16120259 stop_codon Taf4 FlyBase G30782.1 CTGTCGCAGTTCCATGCTGTTCAAGACATACCTCAAGTGATCGCTGCTGTTGCCCATCAATCGCACCGTCTTCTCCTCGCCGATCCTCCTACTCCGTGGACTGTCGTGTTGTTGTTTTATACAGCTTTACGATTTCATCCACTTGCAATATATTTTAGCCTCAACTTTAAATGCGTCGCGTGTCCCCTGTTGTTGTTTCTTTTTAGTTAGGCGGCTCTATTTAATTT 73 16120070 0.778829661 32 68 558 0.9 1.908485019 0.211111111 0.191780822 0.344444444 73 9 0 81 3L:16120033-16120259 6 Taf4 FBtr0333291|FBtr0114589|FBtr0333290|FBtr0345951|FBtr0075451|FBtr0075449|FBtr0301911|FBtr0075450|FBtr0075448 16120071|16120071|16120071|16120071|16120071|16120071|16120071|16120071|16120071 16121368|16121368|16121368|16121368|16121368|16121368|16121368|16121368|16121651 GTCTTC 6mer3-8 dme-miR-7-5p 3L + 16120055 16120146 stop_codon Taf4 FlyBase G23285.1 AAGACATACCTCAAGTGATCGCTGCTGTTGCCCATCAATCGCACCGTCTTCTCCTCGCCGATCCTCCTACTCCGTGGACTGTCGTGTTGTTG 32 16120105 0.715522479 13 29 215 0.88 1.643452676 0.24 0.5 0.68 32 6 0 44 3L:16120055-16120146 6 12.5 2582 FBgn0010280 2452.246667 62.76333333 96.23333333 0.005097366 0.199160869 0.129892622 30 -5 12.5 0.01 dme-miR-13b-2-5p 6mer2-7 TTGACG 3L 16120513 16120518 + 3L_16120513_16120518_+ 0.999999995 1 0.999999998 0 Taf4 FBtr0075449|FBtr0301911|FBtr0075450|FBtr0075448|FBtr0333291|FBtr0333290|FBtr0114589|FBtr0345951|FBtr0075451 16120071|16120071|16120071|16120071|16120071|16120071|16120071|16120071|16120071 16121368|16121368|16121368|16121651|16121368|16121368|16121368|16121368|16121368 3L + 16120493 16120545 3'utr Taf4 FlyBase G30785.1 TAATGTTTGCATCAACTGCATTGACGGCCTTATCTAAACGATATAAACATAAT 17 16120523 0.717692008 6 16 112 0.909090909 1.301029996 0.045454545 0.294117647 0.454545455 17 2 0 20 3L:16120493-16120545 6 Taf4 FBtr0333291|FBtr0114589|FBtr0333290|FBtr0345951|FBtr0075451|FBtr0075449|FBtr0301911|FBtr0075450|FBtr0075448 16120071|16120071|16120071|16120071|16120071|16120071|16120071|16120071|16120071 16121368|16121368|16121368|16121368|16121368|16121368|16121368|16121368|16121651 TTGACG 6mer2-7 dme-miR-13b-2-5p 3L + 16120501 16120535 3'utr Taf4 FlyBase G23289.1 GCATCAACTGCATTGACGGCCTTATCTAAACGATA 5 16120522 0.690117559 3 4 27 0.7 0.84509804 0 0.4 0.7 5 3 0 7 3L:16120501-16120535 6 10 2583 FBgn0010280 2452.246667 62.76333333 96.23333333 0.004077893 0.159328695 0.103914098 -10 -9 -9.5 0.01 dme-miR-988-3p 6mer2-7 CAAGGG 3L 16120619 16120624 + 3L_16120619_16120624_+ 1 0.999965267 0.999982633 2.45E-05 Taf4 FBtr0075449|FBtr0301911|FBtr0075450|FBtr0075448|FBtr0333291|FBtr0333290|FBtr0114589|FBtr0345951|FBtr0075451 16120071|16120071|16120071|16120071|16120071|16120071|16120071|16120071|16120071 16121368|16121368|16121368|16121651|16121368|16121368|16121368|16121368|16121368 3L + 16120587 16120666 3'utr Taf4 FlyBase G30786.1 CGAACCATAATTCCTAGATTTTAAGTAAAAAGCAAGGGCGCGTGAAGAGAAATCGAAACCGAATTACAGATAAAGGTTTT 8 16120612 0.879262943 3 6 29 0.666666667 0.77815125 0.222222222 0.125 0.222222222 8 3 0 6 3L:16120587-16120666 6 Taf4 FBtr0333291|FBtr0114589|FBtr0333290|FBtr0345951|FBtr0075451|FBtr0075449|FBtr0301911|FBtr0075450|FBtr0075448 16120071|16120071|16120071|16120071|16120071|16120071|16120071|16120071|16120071 16121368|16121368|16121368|16121368|16121368|16121368|16121368|16121368|16121651 CAAGGG 6mer2-7 dme-miR-988-3p 3L + 16120558 16120619 3'utr Taf4 FlyBase G23290.1 ATTATTTAGCTTAGTTTGTTAAACGAAAACGAACCATAATTCCTAGATTTTAAGTAAAAAGC 7 16120597 0.98913144 4 6 58 0.888888889 0.903089987 0.111111111 0.285714286 0.444444444 7 1 0 8 3L:16120558-16120619 1 2.5 2584 FBgn0010280 2452.246667 62.76333333 96.23333333 0.001019473 0.039832174 0.025978524 7 22 14.5 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 3L 16121480 16121485 + 3L_16121480_16121485_+ 1 1 1 0 Taf4 FBtr0075448 16120071 16121651 3L + 16121448 16121495 3'utr Taf4 FlyBase G30794.2 TTTATGTCGTATGGAATATGTAACGGTATCTCAGTTAATTAGCTAGTT 12 16121482 0.987204677 5 8 99 0.722222222 1.113943352 0.055555556 0.333333333 0.555555556 12 5 0 13 3L:16121448-16121495 6 Taf4 FBtr0075448 16120071 16121651 AGTTAA 6mer3-8 dme-miR-999-3p 3L + 16121451 16121500 3'utr Taf4 FlyBase G23296.1 ATGTCGTATGGAATATGTAACGGTATCTCAGTTAATTAGCTAGTTAAATC 11 16121482 0.989439887 4 8 91 0.705882353 1.079181246 0 0.363636364 0.588235294 11 5 0 12 3L:16121451-16121500 6 9.5 2585 FBgn0010280 2452.246667 62.76333333 96.23333333 0.003873999 0.15136226 0.098718393 -2 -2 -2 0.01 dme-miR-92b-3p 7mer-m1 TGCAATT 3L 16136528 16136534 + 3L_16136528_16136534_+ 0.765586663 0.765586663 0.765586663 0 elg1 FBtr0089714|FBtr0307518|FBtr0089713 16136465|16136465|16136465 16136691|16136691|16136691 3L + 16136497 16136538 3'utr elg1 FlyBase G30828.1 AAATTGGTGGAGCAGCTCCGCCGGCTTTGTTTGCAATTTATT 10 16136526 0.836103498 6 10 63 1 1.176091259 0.266666667 0.3 0.533333333 10 0 0 15 3L:16136497-16136538 7 elg1 FBtr0089714|FBtr0307518|FBtr0089713 16136465|16136465|16136465 16136691|16136691|16136691 TGCAATT 7mer-m1 dme-miR-92b-3p 3L + 16136493 16136529 3'utr elg1 FlyBase G23321.1 TTTGAAATTGGTGGAGCAGCTCCGCCGGCTTTGTTTG 5 16136525 0.860100951 4 5 34 1 0.77815125 0.666666667 0.2 0.333333333 5 0 0 6 3L:16136493-16136529 2 4.5 2586 FBgn0036574 878.6533333 25.39 38.88333333 0.005121474 0.177235132 0.115730819 2 3 2.5 0.01 dme-miR-304-5p 6mer3-8 TGAGAT 3L 16136604 16136609 + 3L_16136604_16136609_+ 0.999996556 1 0.999998278 2.40E-06 elg1 FBtr0089714|FBtr0307518|FBtr0089713 16136465|16136465|16136465 16136691|16136691|16136691 3L + 16136539 16136668 3'utr elg1 FlyBase G30829.1 CAGATCGTTTAAGAAGAGTTGATCTTTTTTAAGATAGCTTTGTGGACATGAAGATGTAGCTATTATGAGATAAACCTAGAACTATTTACAATTTAACTATGATAAACTAACTACGACCTCATCCTATGTT 16 16136604 0.980340902 11 15 115 0.952380952 1 0.047619048 0.1875 0.380952381 16 0 1 20 3L:16136539-16136668 6 elg1 FBtr0089714|FBtr0307518|FBtr0089713 16136465|16136465|16136465 16136691|16136691|16136691 TGAGAT 6mer3-8 dme-miR-304-5p 3L + 16136579 16136610 3'utr elg1 FlyBase G23322.1 TGTGGACATGAAGATGTAGCTATTATGAGATA 6 16136601 0.989423315 3 4 37 0.75 0.77815125 0 0.166666667 0.375 6 2 0 6 3L:16136579-16136610 6 4 2587 FBgn0036574 878.6533333 25.39 38.88333333 0.004552421 0.15754234 0.102871839 0 3 1.5 0.01 dme-miR-932-5p 6mer3-8 GGAATT 3L 16139512 16139517 - 3L_16139512_16139517_- 1 1 1 0 CG5151 FBtr0307521|FBtr0346525|FBtr0307519|FBtr0307520 16137800|16139499|16139499|16139499 16140460|16140460|16140460|16140460 3L - 16139506 16139553 3'utr CG5151 FlyBase G37208.1 AGTTCAATTGAAATTTGTATTTGTATATTTGCTAACGGAATTACGATG 8 16139541 0.992229324 7 7 78 0.888888889 0.903089987 0.222222222 0.125 0.222222222 8 1 0 8 3L:16139506-16139553 6 CG5151 FBtr0307519|FBtr0307520|FBtr0307521|FBtr0346525 16139499|16139499|16137800|16139499 16140460|16140460|16140460|16140460 GGAATT 6mer3-8 dme-miR-932-5p 3L - 16139509 16139562 3'utr CG5151 FlyBase G28094.1 ACAATTTTTAGTTCAATTGAAATTTGTATTTGTATATTTGCTAACGGAATTACG 7 16139539 0.992576415 6 7 78 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3L:16139509-16139562 6 2 2588 FBgn0036576 611.6966667 13.02666667 19.93 0.003269594 0.153531218 0.100351229 24 22 23 0.01 dme-miR-14-3p 7mer-m8 AAGACTG 3L 16140053 16140059 - 3L_16140053_16140059_- 0.671795832 0.671795832 0.671795832 0 CG5151 FBtr0307521|FBtr0346525|FBtr0307519|FBtr0307520 16137800|16139499|16139499|16139499 16140460|16140460|16140460|16140460 3L - 16139886 16140090 3'utr CG5151 FlyBase G37209.2 GGTCTGTCGCCAACTTTTGCGCTGGTACGAAAAGACTGTTTATTAGTCAGAATTTAATTTGTAAATTTGAGTAACGAGAGGAAAGAAAAGTTAGAGAATGATACGGAGAAGACATATGTATAGTTGCGCTGCCGCCTTTTAAGCACTCACCACAGACCGTAGAAGGTTCATTTTTAAGTTATGTAACATTATTTCCATTCGTCGC 969 16140052 0.911593735 43 919 5163 0.969949917 2.463146137 0.293823038 0.187822497 0.343071786 969 33 3 1162 3L:16139886-16140090 7 CG5151 FBtr0307519|FBtr0307520|FBtr0307521|FBtr0346525 16139499|16139499|16137800|16139499 16140460|16140460|16140460|16140460 AAGACTG 7mer-m8 dme-miR-14-3p 3L - 16140032 16140083 3'utr CG5151 FlyBase G28098.2 CGCCAACTTTTGCGCTGGTACGAAAAGACTGTTTATTAGTCAGAATTTAATT 515 16140052 0.634607789 12 478 3252 0.966292135 2.043642921 0.324594257 0.390291262 0.607990012 515 21 6 774 3L:16140032-16140083 7 516.5 2589 FBgn0036576 611.6966667 13.02666667 19.93 0.844372756 39.64943705 25.91570497 -7 -7 -7 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3L 16140335 16140340 - 3L_16140335_16140340_- 1 1 1 0 CG5151 FBtr0307521|FBtr0346525|FBtr0307519|FBtr0307520 16137800|16139499|16139499|16139499 16140460|16140460|16140460|16140460 3L - 16140235 16140374 3'utr CG5151 FlyBase G37210.2 CAGTTCACTAGCCGATTTGAACTTCTCAAACCGTAAGACTTTGCATGGTATTTGATCATAATTTGTAAACTTACCGCAGGTCTTGTGTCTAAAAAGCTTTACTTGAGGTAAAATATTGCCAAATTTAGTGAAATACTTAT 110 16140333 0.728871046 29 104 808 0.949640288 1.421603927 0.237410072 0.227272727 0.388489209 110 3 4 132 3L:16140235-16140374 6 CG5151 FBtr0307519|FBtr0307520|FBtr0307521|FBtr0346525 16139499|16139499|16137800|16139499 16140460|16140460|16140460|16140460 AAGACT 6mer3-8 dme-miR-14-3p 3L - 16140298 16140532 stop_codon CG5151 FlyBase G28099.2 AACTCTAGCATGATGAGCTACCACTGCAGCTGCAATGGCCGAAATTGCAGCCACTGTGCGGCCAACTCATAACTGAGCTCGTGTTAAGTTTAACTACATTAAACAAATCTGGTGGTGCGGAAACCACTGGAGATTTTAGAACATTAGTTAAGTTTCAACAGTTCACTAGCCGATTTGAACTTCTCAAACCGTAAGACTTTGCATGGTATTTGATCATAATTTGTAAACTTACCGC 102 16140333 0.803005578 37 95 662 0.967105263 2.167317335 0.118421053 0.343137255 0.559210526 102 5 0 147 3L:16140298-16140532 6 34.5 2590 FBgn0036576 611.6966667 13.02666667 19.93 0.056400504 2.648413511 1.731058705 -7 -7 -7 0.01 dme-miR-283-5p 8mer-A1 TGATATTA 3L 1617380 1617387 - 3L_1617380_1617387_- 0.592192292 0.592192292 0.592192292 0 CG13926 FBtr0072823 1617346 1617423 3L - 1617367 1617414 3'utr CG13926 FlyBase G33398.1 AATGGAGGCGTCGCCTCCACAAGTTGTTGATATTACAAGTAAAGTTTT 15 1617391 0.824440077 2 15 123 1 1.204119983 0.0625 0.066666667 0.125 15 0 0 16 3L:1617367-1617414 8 CG13926 FBtr0072823 1617346 1617423 TGATATTA 8mer-A1 dme-miR-283-5p 3L - 1617370 1617414 3'utr CG13926 FlyBase G25263.1 AATGGAGGCGTCGCCTCCACAAGTTGTTGATATTACAAGTAAAGT 8 1617391 0.897763154 2 8 58 1 1.079181246 0.083333333 0.5 0.666666667 8 0 0 12 3L:1617370-1617414 8 11 2591 FBgn0035243 84.33333333 14.92666667 22.79 0.130434783 0.736936132 0.482667837 4 4 4 0.01 dme-bantam-3p 8mer-A1 TGATCTCA 3L 16230842 16230849 + 3L_16230842_16230849_+ 0.631136385 0.631136385 0.631136385 0 CG5027 FBtr0075457 16230770 16231139 3L + 16230792 16230866 3'utr CG5027 FlyBase G30835.1 TCTAGTGAAAGCTTTTGATTGCGAGTGAATGTTAGAGAAAGTAAATAAGATGATCTCATAGTGCATTTCCGAGCA 67 16230842 0.975587111 7 66 419 0.9875 1.897627091 0.5125 0.149253731 0.2875 67 1 0 79 3L:16230792-16230866 8 CG5027 FBtr0075457 16230770 16231139 TGATCTCA 8mer-A1 dme-bantam-3p 3L + 16230820 16230862 3'utr CG5027 FlyBase G23326.1 ATGTTAGAGAAAGTAAATAAGATGATCTCATAGTGCATTTCCG 58 16230842 0.796350367 5 53 362 0.905882353 1.886490725 0.564705882 0.362068966 0.564705882 58 8 0 77 3L:16230820-16230862 8 61 2592 FBgn0036579 214.6666667 14.06 21.50666667 0.284161491 4.338549075 2.83632982 0 0 0 0.01 dme-miR-31a-5p 8mer-A1 TCTTGCCA 3L 16236638 16236645 + 3L_16236638_16236645_+ 0.631136385 0.631136385 0.631136385 0 l(3)72Dp FBtr0075459 16236240 16236999 3L + 16236625 16236662 3'utr l(3)72Dp FlyBase G30844.1 AAGCGTTAAATATTCTTGCCAAATCAAGAGACTAATAT 8 16236637 0.703653725 3 8 57 1 0.954242509 0 0.125 0.222222222 8 0 0 9 3L:16236625-16236662 8 l(3)72Dp FBtr0075459 16236240 16236999 TCTTGCCA 8mer-A1 dme-miR-31a-5p 3L + 16236606 16236661 3'utr l(3)72Dp FlyBase G23333.1 AAAACAAAATTCTATCTTTAAGCGTTAAATATTCTTGCCAAATCAAGAGACTAATA 11 16236639 0.98601774 4 9 70 0.866666667 0.812913357 0.066666667 0.272727273 0.466666667 11 1 1 13 3L:16236606-16236661 8 9 2593 FBgn0263607 58 2.816666667 4.343333333 0.155172414 3.195266272 2.072141213 1 -1 0 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG 3L 16372779 16372784 - 3L_16372779_16372784_- 1 1 1 0 roq FBtr0075423|FBtr0333265 16372435|16370936 16374520|16374520 3L - 16372766 16372808 3'utr roq FlyBase G37250.1 TTGGCGATATCCGCTCAGACTTTGGCTGTGGTGATGATGATTT 46 16372786 0.740223918 8 46 398 1 1.681241237 0.291666667 0.043478261 0.083333333 46 0 0 48 3L:16372766-16372808 6 roq FBtr0075423|FBtr0333265 16372435|16370936 16374520|16374520 GCTGTG 6mer2-7 dme-miR-1008-3p 3L - 16372772 16372807 3'utr roq FlyBase G28130.1 TGGCGATATCCGCTCAGACTTTGGCTGTGGTGATGA 30 16372786 0.718721147 5 30 244 1 1.698970004 0.18 0.366666667 0.62 30 0 0 50 3L:16372772-16372807 6 37.5 2594 FBgn0036621 1477.286667 40.04333333 61.43666667 0.025384376 0.936485474 0.610384678 2 2 2 0.01 dme-miR-1003-3p 7mer-A1 TGTGAGA 3L 16373475 16373481 - 3L_16373475_16373481_- 0.598382561 0.598382561 0.598382561 0 roq FBtr0075423|FBtr0333265|FBtr0331173 16372435|16370936|16373214 16374520|16374520|16374520 3L - 16373444 16373522 3'utr roq FlyBase G37252.1 AATAAATTAAAATCACGTCCCATTTTCCCCTTTTTGTAAACTGTGAGAAGAGTGAAGTACAGGAGAATTGACAAACAGG 10 16373488 0.982669797 7 9 63 0.9 0.954242509 0.2 0 0 10 1 0 9 3L:16373444-16373522 7 roq FBtr0331173|FBtr0075423|FBtr0333265 16373214|16372435|16370936 16374520|16374520|16374520 TGTGAGA 7mer-A1 dme-miR-1003-3p 3L - 16373466 16373519 3'utr roq FlyBase G28133.1 AAATTAAAATCACGTCCCATTTTCCCCTTTTTGTAAACTGTGAGAAGAGTGAAG 5 16373510 0.984506562 4 5 41 1 0.903089987 0 0.4 0.625 5 0 0 8 3L:16373466-16373519 7 3 2595 FBgn0036621 1477.286667 40.04333333 61.43666667 0.00203075 0.074918838 0.048830774 7 29 18 0.01 dme-miR-304-5p 6mer3-8 TGAGAT 3L 16373956 16373961 - 3L_16373956_16373961_- 1 1 1 0 roq FBtr0075423|FBtr0333265|FBtr0331173 16372435|16370936|16373214 16374520|16374520|16374520 3L - 16373922 16373986 3'utr roq FlyBase G37254.1 CAGCGAAGATTTTAAAGCAATTTTCTGAGATGAAATAGAGATACTGTGCACTAATTAACTGAATC 30 16373965 0.986502343 6 30 252 1 1.531478917 0 0.1 0.205882353 30 0 0 34 3L:16373922-16373986 6 roq FBtr0331173|FBtr0075423|FBtr0333265 16373214|16372435|16370936 16374520|16374520|16374520 TGAGAT 6mer3-8 dme-miR-304-5p 3L - 16373937 16373990 3'utr roq FlyBase G28135.2 ATAGCAGCGAAGATTTTAAAGCAATTTTCTGAGATGAAATAGAGATACTGTGCA 18 16373964 0.974481787 4 16 125 0.826086957 1.278753601 0.130434783 0.166666667 0.347826087 18 4 0 19 3L:16373937-16373990 6 22.5 2596 FBgn0036621 1477.286667 40.04333333 61.43666667 0.015230626 0.561891284 0.366230807 4 3 3.5 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 3L 1638011 1638017 - 3L_1638011_1638017_- 0.620204266 0.620204266 0.620204266 0 metl FBtr0072814|FBtr0072813 1637940|1637940 1638040|1638040 3L - 1637994 1638037 3'utr metl FlyBase G33402.1 AATTTAGACGAATAGTTCTGTGCATTTTAAACCTTGTTCAAATC 5 1638018 0.985561738 5 5 43 1 0.954242509 0 0.6 0.777777778 5 0 0 9 3L:1637994-1638037 7 metl FBtr0072814|FBtr0072813 1637940|1637940 1638040|1638040 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 1637993 1638037 3'utr metl FlyBase G25265.1 AATTTAGACGAATAGTTCTGTGCATTTTAAACCTTGTTCAAATCA 6 1638012 0.992272545 5 5 52 0.7 0.84509804 0 0.5 0.7 6 3 0 7 3L:1637993-1638037 7 5.5 2597 FBgn0035247 536.0166667 56.80666667 87.84333333 0.010260875 0.096819622 0.062611467 1 -5 -2 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA 3L 16404084 16404089 - 3L_16404084_16404089_- 1 1 1 0 fax FBtr0075413|FBtr0100478|FBtr0331175|FBtr0100477|FBtr0075412|FBtr0331176 16402794|16402794|16402794|16403576|16402794|16402794 16405116|16405116|16405116|16405116|16405116|16405116 3L - 16404082 16404130 3'utr fax FlyBase G37273.1 TTTATATATATATGATTGCAAATAGTAATTTTGATTCTCGTGTGCAAAT 14 16404100 0.979321819 5 13 141 1 1.230448921 0.058823529 0.142857143 0.294117647 14 0 0 17 3L:16404082-16404130 6 fax FBtr0075412|FBtr0331176|FBtr0331175|FBtr0100477|FBtr0075413|FBtr0100478 16402794|16402794|16402794|16403576|16402794|16402794 16405116|16405116|16405116|16405116|16405116|16405116 GTGCAA 6mer3-8 dme-miR-92b-3p 3L - 16404071 16404119 3'utr fax FlyBase G28150.1 ATGATTGCAAATAGTAATTTTGATTCTCGTGTGCAAATAATTAAACAAA 16 16404099 0.590378522 7 16 156 1 1.414973348 0.153846154 0.5 0.692307692 16 0 0 26 3L:16404071-16404119 6 13 2598 FBgn0014163 1457.54 56.77666667 88.11333333 0.008919138 0.228967299 0.147537263 11 10 10.5 0.01 dme-miR-184-3p 6mer2-7 CCGTCC 3L 1640661 1640666 + 3L_1640661_1640666_+ 1 1 1 0 Bgb FBtr0072758 1640635 1640952 3L + 1640625 1640667 stop_codon Bgb FlyBase G27183.1 TGGCGTCGTTAGTTGGACCTGTGGACGGCTCCTGGGCCGTCCC 6 1640646 0.942517061 2 6 32 1 1.041392685 0 0.333333333 0.636363636 6 0 0 11 3L:1640625-1640667 6 Bgb FBtr0072758 1640635 1640952 CCGTCC 6mer2-7 dme-miR-184-3p 3L + 1640625 1640666 stop_codon Bgb FlyBase G20581.1 TGGCGTCGTTAGTTGGACCTGTGGACGGCTCCTGGGCCGTCC 5 1640638 0.677157436 2 5 35 1 0.903089987 0.25 0.6 0.75 5 0 0 8 3L:1640625-1640666 6 3 2599 FBgn0013753 472.3333333 47.15333333 72.62666667 0.006351447 0.063622225 0.041307142 15 23 19 0.01 dme-miR-995-5p 6mer3-8 AATTCG 3L 1640722 1640727 + 3L_1640722_1640727_+ 1 1 1 0 Bgb FBtr0072758 1640635 1640952 3L + 1640689 1640820 stop_codon Bgb FlyBase G27184.1 AGCAGCAGACGCATCACCAGCAGTTAGAGACTCAATTCGCGAATACTCAATATTTCATGGACAACTGAGAATGCTCCGAACCCCTTAAGAGGGCTTTCACTTGAGAGATTTCAATACGATTACGTTAGACAC 126 1640713 0.773529019 18 120 617 0.959459459 1.67516709 0.054054054 0.142857143 0.27027027 126 4 2 142 3L:1640689-1640820 6 Bgb FBtr0072758 1640635 1640952 AATTCG 6mer3-8 dme-miR-995-5p 3L + 1640689 1640931 stop_codon Bgb FlyBase G20582.1 AGCAGCAGACGCATCACCAGCAGTTAGAGACTCAATTCGCGAATACTCAATATTTCATGGACAACTGAGAATGCTCCGAACCCCTTAAGAGGGCTTTCACTTGAGAGATTTCAATACGATTACGTTAGACACGCTCGAATAATTATGCTCCTAGATTAGTGTTAGATGTAATGCTTACTTTACGTATGCTTTTATGGTATTATACTTACAACTTAGTGTGAAATTAGTGTCGTATCTTTAACT 100 1640713 0.919911696 27 96 560 0.965986395 1.550228353 0.095238095 0.3 0.523809524 100 2 3 142 3L:1640689-1640931 6 78 2600 FBgn0013753 472.3333333 47.15333333 72.62666667 0.165137615 1.654177859 1.07398568 9 9 9 0.01 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 16470650 16470657 - 3L_16470650_16470657_- 0.668734347 0.668734347 0.668734347 0 aos FBtr0075408 16470384 16471298 3L - 16470594 16470686 3'utr aos FlyBase G37291.1 CGAAGGCAGTTTGAAACTGTGGCAACTCTGGCAGCTATTTTAGTGCAATTTTTGTGACGCCTTCACAGCCACTTCTCCGGAATTTGAGCAAGT 1274 16470658 0.868090257 17 1256 9187 0.984866828 2.910357557 0.401331719 0.226059655 0.4031477 1274 24 1 1627 3L:16470594-16470686 8 aos FBtr0075408 16470384 16471298 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L - 16470587 16470688 3'utr aos FlyBase G28164.1 AGCGAAGGCAGTTTGAAACTGTGGCAACTCTGGCAGCTATTTTAGTGCAATTTTTGTGACGCCTTCACAGCCACTTCTCCGGAATTTGAGCAAGTAAATTAG 1016 16470658 0.981606195 18 1003 7362 0.987228608 2.411058239 0.344827586 0.382874016 0.599616858 1016 15 5 1546 3L:16470587-16470688 8 1133 2601 FBgn0004569 11.33333333 0.5 0.773333333 99.97058824 2266 1465.086207 1 1 1 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3L 16491942 16491947 - 3L_16491942_16491947_- 1 1 1 0 CG43373 FBtr0307367 16491836 16507727 3L - 16491873 16491961 3'utr CG43373 FlyBase G37301.1 CGATTCCTAATAAAAAGACTTGAACCCAGAGCAGATATTGAATGCATTGCATTGAATATTTTGCCAATGTAAATCATTCCCATCAACAC 12 16491953 0.959026325 8 12 63 1 1.230448921 0.294117647 0.25 0.470588235 12 0 0 17 3L:16491873-16491961 6 CG43373 FBtr0307367 16491836 16507727 AAGACT 6mer3-8 dme-miR-14-3p 3L - 16491929 16491997 3'utr CG43373 FlyBase G28170.1 GAGGAGCACAAGAACTAGCCTGTGCAATAACTTTAACGATTCCTAATAAAAAGACTTGAACCCAGAGCA 9 16491952 0.97609129 5 6 35 0.777777778 0.84509804 0.444444444 0 0 9 2 0 7 3L:16491929-16491997 6 6.5 2602 FBgn0263131 3.073333333 0.063333333 0.1 2.114967462 102.6315789 65 6 5 5.5 0.01 dme-miR-282-5p 6mer2-7 GAGGCT 3L 16575964 16575969 + 3L_16575964_16575969_+ 1 1 1 0 mbf1 FBtr0075393|FBtr0305570|FBtr0305569|FBtr0075394 16575868|16575868|16575868|16575868 16576408|16576871|16576408|16576871 3L + 16575941 16575994 3'utr mbf1 FlyBase G30873.1 GAACCATCAACACACGGATTCTGGAGGCTGGAGCACTGTAAGCGGCAGACGCAA 8 16575961 0.93051506 3 7 28 1 1 0.7 0.125 0.3 8 0 0 10 3L:16575941-16575994 6 mbf1 FBtr0305570|FBtr0305569|FBtr0075394|FBtr0075393 16575868|16575868|16575868|16575868 16576871|16576408|16576871|16576408 GAGGCT 6mer2-7 dme-miR-282-5p 3L + 16575953 16575991 3'utr mbf1 FlyBase G23350.1 CACGGATTCTGGAGGCTGGAGCACTGTAAGCGGCAGACG 5 16575962 0.961839735 2 4 20 0.75 0.77815125 0.75 0.6 0.75 5 2 0 6 3L:16575953-16575991 6 5.5 2603 FBgn0262732 2231.09 243.8166667 374.3166667 0.002465163 0.022557933 0.014693441 3 2 2.5 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 3L 16576316 16576321 + 3L_16576316_16576321_+ 0.999999966 1 0.999999983 0 mbf1 FBtr0075393|FBtr0330137|FBtr0305570|FBtr0305569|FBtr0075394 16575868|16575997|16575868|16575868|16575868 16576408|16576408|16576871|16576408|16576871 3L + 16576274 16576370 3'utr mbf1 FlyBase G30877.2 GGACGTGAAACGCAAAAGACTAATCTGATATTAACGCGCTCATAGCTTGGAGTAGTGTTATTCGTTCATTTTGGCATTAGAGTATGTTTTGAAACTT 21 16576320 0.963864782 10 19 123 0.821428571 1.361727836 0.321428571 0.238095238 0.428571429 21 5 0 23 3L:16576274-16576370 6 mbf1 FBtr0330137|FBtr0305570|FBtr0305569|FBtr0075394|FBtr0075393 16575997|16575868|16575868|16575868|16575868 16576408|16576871|16576408|16576871|16576408 TAGCTT 6mer3-8 dme-miR-79-3p 3L + 16576239 16576344 3'utr mbf1 FlyBase G23352.1 ACGAGATGCACACAAGTCGGAAACGGAAGCGAGACGGACGTGAAACGCAAAAGACTAATCTGATATTAACGCGCTCATAGCTTGGAGTAGTGTTATTCGTTCATTT 9 16576330 0.971446583 7 9 49 1 1.079181246 0.25 0.333333333 0.5 9 0 0 12 3L:16576239-16576344 6 7.5 2604 FBgn0262732 2231.09 243.8166667 374.3166667 0.003361586 0.030760818 0.020036511 -4 -14 -9 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3L 16576661 16576667 + 3L_16576661_16576667_+ 0.661615511 0.661615511 0.661615511 0 mbf1 FBtr0305570|FBtr0075394 16575868|16575868 16576871|16576871 3L + 16576574 16576687 3'utr mbf1 FlyBase G30878.1 TATCGTGTAAGGCTCTTGAACTGTGCGTTTACTAATGCATTATACATATTATACAAAAACATATGCTAAATGTATTTAGAAACATTTTCTAGTCTACAAAATATTTAAATAATT 91 16576660 0.94012809 11 87 657 0.974137931 1.752048448 0.00862069 0.241758242 0.405172414 91 2 1 113 3L:16576574-16576687 7 mbf1 FBtr0305570|FBtr0075394 16575868|16575868 16576871|16576871 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 16576635 16576682 3'utr mbf1 FlyBase G23354.1 TATGCTAAATGTATTTAGAAACATTTTCTAGTCTACAAAATATTTAAA 61 16576660 0.923070235 6 61 428 1 1.886490725 0.012987013 0.196721311 0.363636364 61 0 0 77 3L:16576635-16576682 7 69 2605 FBgn0262732 2231.09 243.8166667 374.3166667 0.030926587 0.282999521 0.184335901 1 1 1 0.01 dme-bantam-3p 6mer3-8 TGATCT 3L 16589804 16589809 + 3L_16589804_16589809_+ 1 1 1 0 l(3)73Ah FBtr0075311|FBtr0307336 16589773|16589773 16590132|16590132 3L + 16589728 16589892 stop_codon l(3)73Ah FlyBase G30898.1 GGGATCCGCCGCTTCGGCTGCAGTTTCGTCCGCGGGTCGAGCTCTAACCACTGTTTTAGTATAATGCCACAACAAATGATCTATTTTTATAATTTATTGACAATGCGTAAATATCGTAATTAGGAGAGTCGCTAGTGTTAGTCCCCTCGAAACCATGAGTGTATG 151 16589804 0.98487165 21 149 1203 0.983695652 1.655618584 0.048913043 0.165562914 0.315217391 151 0 3 181 3L:16589728-16589892 6 l(3)73Ah FBtr0307336|FBtr0075311 16589773|16589773 16590132|16590132 TGATCT 6mer3-8 dme-bantam-3p 3L + 16589729 16589847 stop_codon l(3)73Ah FlyBase G23376.1 GGATCCGCCGCTTCGGCTGCAGTTTCGTCCGCGGGTCGAGCTCTAACCACTGTTTTAGTATAATGCCACAACAAATGATCTATTTTTATAATTTATTGACAATGCGTAAATATCGTAAT 98 16589804 0.91403582 13 93 817 0.922535211 2.117271296 0.014084507 0.346938776 0.549295775 98 11 0 131 3L:16589729-16589847 6 106.5 2606 FBgn0002283 168.7966667 15.21333333 23.25333333 0.63093663 7.000438212 4.579988532 0 0 0 0.01 dme-miR-317-5p 6mer2-7 TATCCC 3L 16589929 16589934 + 3L_16589929_16589934_+ 1 1 1 0 l(3)73Ah FBtr0075311|FBtr0307336 16589773|16589773 16590132|16590132 3L + 16589922 16589967 3'utr l(3)73Ah FlyBase G30899.1 ATATGGTTATCCCTCCTAGAATTAAGTAACTTCCACTTCCTAACTC 16 16589938 0.983181755 5 15 119 1 1.255272505 0 0.125 0.222222222 16 0 0 18 3L:16589922-16589967 6 l(3)73Ah FBtr0307336|FBtr0075311 16589773|16589773 16590132|16590132 TATCCC 6mer2-7 dme-miR-317-5p 3L + 16589898 16589952 3'utr l(3)73Ah FlyBase G23377.1 ATGTGCATGTATAAAGTCGTAAATATATGGTTATCCCTCCTAGAATTAAGTAACT 6 16589938 0.987517253 3 6 54 1 0.903089987 0 0.333333333 0.5 6 0 0 8 3L:16589898-16589952 6 9.5 2607 FBgn0002283 168.7966667 15.21333333 23.25333333 0.056280732 0.624452235 0.408543578 -9 -9 -9 0.01 dme-miR-184-5p 6mer3-8 TGATAA 3L 16613454 16613459 - 3L_16613454_16613459_- 1 1 1 0 Mo25 FBtr0075358 16613216 16614149 3L - 16613404 16613498 3'utr Mo25 FlyBase G37362.1 GAAAACTAAATACTGCATAAAAATAATAATAATTCATAGTGATAATTGTCTGTGCATCCTTCGGCATGGACTCTACTATATATACACTGATATAT 16 16613453 0.993852154 10 12 137 0.75 0.77815125 0.125 0 0 16 3 1 12 3L:16613404-16613498 6 Mo25 FBtr0075358 16613216 16614149 TGATAA 6mer3-8 dme-miR-184-5p 3L - 16613440 16613471 3'utr Mo25 FlyBase G28215.1 AATAATTCATAGTGATAATTGTCTGTGCATCC 6 16613466 0.885110658 5 6 47 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3L:16613440-16613471 6 7 2608 FBgn0017572 1422.476667 76.83666667 118.16 0.004920995 0.091102338 0.059241706 -6 7 0.5 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3L 16616435 16616440 - 3L_16616435_16616440_- 1 1 1 0 Abl FBtr0345369|FBtr0112790 16615864|16615864 16622773|16622773 3L - 16616324 16616515 3'utr Abl FlyBase G37369.1 ACAGTAGCGAAGCCCAAAGATATTATTATTAACTAACTACAACTACTACTACTCAAATTGATATGTTTAGTGGCAAAGACTATATTGATTTATGTTTAATCTATGTTCGAGAACGAAGCGCATCGAAATGCTTTTAAGACGTATTACACAACCAACTGTAATTATTATCTGATATTTTCAAAGATTTTAAAC 36 16616432 0.985771609 19 32 262 0.913043478 1.62324929 0.217391304 0.25 0.413043478 36 4 0 42 3L:16616324-16616515 6 Abl FBtr0345369|FBtr0112790 16615864|16615864 16622773|16622773 AAGACT 6mer3-8 dme-miR-14-3p 3L - 16616338 16616505 3'utr Abl FlyBase G28218.1 AGCCCAAAGATATTATTATTAACTAACTACAACTACTACTACTCAAATTGATATGTTTAGTGGCAAAGACTATATTGATTTATGTTTAATCTATGTTCGAGAACGAAGCGCATCGAAATGCTTTTAAGACGTATTACACAACCAACTGTAATTATTATCTGATATTTT 32 16616431 0.984756412 15 31 243 0.960784314 1.69019608 0.098039216 0.46875 0.666666667 32 2 0 49 3L:16616338-16616505 6 13.5 2609 FBgn0000017 169917.41 1653.646667 2554.62 7.95E-05 0.008163775 0.005284543 -8 -9 -8.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 3L 16616544 16616549 - 3L_16616544_16616549_- 1 1 1 0 Abl FBtr0345369|FBtr0112790 16615864|16615864 16622773|16622773 3L - 16616516 16616563 3'utr Abl FlyBase G37369.2 TATGTCTATGATCATGATCTATATGTGCTCGGCGTAACCATTGCATAC 14 16616549 0.788815173 5 13 111 0.944444444 1.230448921 0.166666667 0.214285714 0.388888889 14 1 0 17 3L:16616516-16616563 6 Abl FBtr0345369|FBtr0112790 16615864|16615864 16622773|16622773 TGATCT 6mer3-8 dme-bantam-3p 3L - 16616514 16616565 3'utr Abl FlyBase G28219.1 TATATGTCTATGATCATGATCTATATGTGCTCGGCGTAACCATTGCATACAC 11 16616549 0.985251883 4 11 90 1 1.204119983 0 0.363636364 0.5625 11 0 0 16 3L:16616514-16616565 6 11 2610 FBgn0000017 169917.41 1653.646667 2554.62 6.47E-05 0.006651965 0.004305924 0 0 0 0.01 dme-miR-190-5p 6mer3-8 ACATAT 3L 16622071 16622076 - 3L_16622071_16622076_- 1 1 1 0 Abl FBtr0345369|FBtr0112790 16615864|16615864 16622773|16622773 3L - 16621995 16622207 3'utr Abl FlyBase G37371.1 CAAACGTATTCGCGCTTCGTTTGTTTTATATACATAGAAAGACACAAGACATGGCTTAAGAATGAAAGGAAATATATTCATAGAATATCTCAATAAACTTAGTAATTACGAAGAAAACGCAATGCATATATACATATACATACATATATTTACATATACTAGTCGTAAAATGTTTTATTAAACCTATACATTTACATACTTCTACAAGATAAA 91 16622080 0.982891016 27 80 597 0.87962963 1.67669361 0.138888889 0.164835165 0.296296296 91 12 1 95 3L:16621995-16622207 6 Abl FBtr0345369|FBtr0112790 16615864|16615864 16622773|16622773 ACATAT 6mer3-8 dme-miR-190-5p 3L - 16622030 16622149 3'utr Abl FlyBase G28221.1 AGAATGAAAGGAAATATATTCATAGAATATCTCAATAAACTTAGTAATTACGAAGAAAACGCAATGCATATATACATATACATACATATATTTACATATACTAGTCGTAAAATGTTTTAT 67 16622080 0.978272903 20 56 452 0.85 1.929418926 0.16 0.343283582 0.56 67 15 0 85 3L:16622030-16622149 6 18.5 2611 FBgn0000017 169917.41 1653.646667 2554.62 0.000108876 0.011187396 0.007241782 4 4 4 0.01 dme-miR-252-5p 6mer3-8 GTACTT 3L 16649304 16649309 - 3L_16649304_16649309_- 1 1 1 0 Baldspot FBtr0075355|FBtr0075356 16648440|16648839 16650074|16650074 3L - 16649294 16649329 3'utr Baldspot FlyBase G37413.1 AGTTGGGGTCTGAGAACTTTGTACTTCTAAGTCTAT 10 16649309 0.670045333 4 10 86 1 1.079181246 0.166666667 0.2 0.333333333 10 0 0 12 3L:16649294-16649329 6 Baldspot FBtr0075356|FBtr0075355 16648839|16648440 16650074|16650074 GTACTT 6mer3-8 dme-miR-252-5p 3L - 16649292 16649329 3'utr Baldspot FlyBase G28254.1 AGTTGGGGTCTGAGAACTTTGTACTTCTAAGTCTATAC 6 16649309 0.984309826 5 6 46 1 0.954242509 0.333333333 0.5 0.666666667 6 0 0 9 3L:16649292-16649329 6 7 2612 FBgn0260960 2360.606667 103.09 158.2033333 0.002965339 0.067901833 0.044246855 0 0 0 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 16649828 16649833 - 3L_16649828_16649833_- 1 1 1 0 Baldspot FBtr0075355|FBtr0075356 16648440|16648839 16650074|16650074 3L - 16649815 16649965 3'utr Baldspot FlyBase G37417.1 CCTGGGTGGCACACGACCGGTCGGATGAGAGTTTAATTTTGTAAGCCAAAAGTTGTACCGTGTGGACAGGCGTACGAACCATATATCTGAACATGTATATAAAAGAAGAAAAAAACAGACGAACCTAAGCTAACCAAAACTCAGAGTCGAG 12 16649837 0.923792939 9 12 51 1 1.079181246 0.25 0 0 12 0 0 12 3L:16649815-16649965 6 Baldspot FBtr0075356|FBtr0075355 16648839|16648440 16650074|16650074 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 16649769 16649849 3'utr Baldspot FlyBase G28256.1 AGACGAACCTAAGCTAACCAAAACTCAGAGTCGAGTCAGAATAAACTCTATGTAATTGAGGGGCAAAGAAGCGAGCGCATG 7 16649837 0.926931711 6 6 25 0.75 0.77815125 0 0.142857143 0.25 7 2 0 6 3L:16649769-16649849 6 3.5 2613 FBgn0260960 2360.606667 103.09 158.2033333 0.00148267 0.033950917 0.022123428 4 4 4 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3L 16662766 16662771 - 3L_16662766_16662771_- 0.999999999 0.999713298 0.999856649 0.000202728 Galphaf FBtr0075354 16662555 16662848 3L - 16662758 16662796 3'utr Galphaf FlyBase G37424.1 GTCCTCAGGCCCCCACCAACTGTGATCTAGTAGGATATG 17 16662769 0.938051367 3 17 68 1 1.342422681 0.318181818 0.294117647 0.454545455 17 0 0 22 3L:16662758-16662796 6 Galphaf FBtr0075354 16662555 16662848 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3L - 16662763 16662790 3'utr Galphaf FlyBase G28261.1 AGGCCCCCACCAACTGTGATCTAGTAGG 6 16662769 0.92378564 3 6 21 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 3L:16662763-16662790 6 11.5 2614 FBgn0010223 69.33333333 4.69 7.25 0.165865385 2.452025586 1.586206897 -2 -2 -2 0.01 dme-miR-252-5p 6mer3-8 GTACTT 3L 16672363 16672368 - 3L_16672363_16672368_- 1 1 1 0 zetaCOP FBtr0075353 16671937 16672420 3L - 16672353 16672454 lincRNA_exon-lincRNA_intron zetaCOP FlyBase G37429.1 GGTAACTAACACCCTTAATGGTCTATTTTGGTAGTCTAACTACTTGGTAGCTCTTCTAAGTGTTTATAACTCAATGGTAGCCGTTTGTACTTTAATTTTGTC 28 16672380 0.988376901 11 26 263 0.935483871 1.462397998 0.096774194 0.107142857 0.193548387 28 2 0 29 3L:16672353-16672454 6 zetaCOP FBtr0075353 16671937 16672420 GTACTT 6mer3-8 dme-miR-252-5p 3L - 16672342 16672397 3'utr zetaCOP FlyBase G28266.1 AAGTGTTTATAACTCAATGGTAGCCGTTTGTACTTTAATTTTGTCTGGTTTCGTTT 10 16672380 0.986322987 4 10 92 1 1.041392685 0 0.1 0.181818182 10 0 0 11 3L:16672342-16672397 6 13 2615 FBgn0040512 644 115.9 176.2033333 0.020186335 0.11216566 0.0737784 12 12 12 0.01 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3L 16723835 16723842 + 3L_16723835_16723842_+ 0.63113665 0.63113665 0.63113665 0 Dab FBtr0305085|FBtr0305084|FBtr0333625|FBtr0330190|FBtr0305086|FBtr0333626|FBtr0330189|FBtr0075318 16723340|16723340|16723340|16723748|16723340|16723340|16723748|16723340 16724415|16724415|16724415|16724415|16724415|16724415|16724415|16724575 3L + 16723821 16723847 3'utr Dab FlyBase G30935.1 ATTCGCCACATATATCTAGTCAACTCA 13 16723833 0.711802589 3 13 81 1 1.255272505 0 0.307692308 0.5 13 0 0 18 3L:16723821-16723847 8 Dab FBtr0330189|FBtr0075318|FBtr0305086|FBtr0333626|FBtr0333625|FBtr0330190|FBtr0305085|FBtr0305084 16723748|16723340|16723340|16723340|16723340|16723748|16723340|16723340 16724415|16724575|16724415|16724415|16724415|16724415|16724415|16724415 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L + 16723811 16723850 3'utr Dab FlyBase G23405.1 ACGATATTTAATTCGCCACATATATCTAGTCAACTCAATC 6 16723834 0.97049004 4 6 41 1 1 0 0.5 0.7 6 0 0 10 3L:16723811-16723850 8 9.5 2616 FBgn0000414 579.9766667 8.573333333 13.19 0.016379969 1.108087092 0.720242608 2 1 1.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 16777524 16777529 - 3L_16777524_16777529_- 1 1 1 0 CG13025 FBtr0333610|FBtr0333610|FBtr0333610|FBtr0075346|FBtr0075346|FBtr0075346 16777447|16777447|16777447|16776529|16776529|16776529 16777593|16777593|16777593|16777593|16777593|16777593 3L - 16777487 16777539 3'utr CG13025 FlyBase G37456.1 TAGCTAATTTCTGTGAAATATGTGACTACTGATATAAACGAGCTTTTAAGCTA 14 16777531 0.721034062 7 10 108 0.777777778 1.146128036 0.222222222 0.214285714 0.388888889 14 4 0 14 3L:16777487-16777539 6 CG13025 FBtr0075346|FBtr0075346|FBtr0075346|FBtr0333610|FBtr0333610|FBtr0333610 16776529|16776529|16776529|16777447|16777447|16777447 16777593|16777593|16777593|16777593|16777593|16777593 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 16777483 16777543 3'utr CG13025 FlyBase G28288.1 CTTTTAGCTAATTTCTGTGAAATATGTGACTACTGATATAAACGAGCTTTTAAGCTAAGTT 22 16777531 0.684653915 8 21 183 0.962962963 1.113943352 0.222222222 0.227272727 0.37037037 22 0 1 26 3L:16777483-16777543 6 14 2617 FBgn0036660 194.1566667 10.47 16.01333333 0.072106718 1.337153773 0.87427144 2 2 2 0.01 dme-miR-263a-5p 6mer2-7 TGCCAT 3L 16782073 16782078 + 3L_16782073_16782078_+ 1 1 1 0 CG9705 FBtr0333607|FBtr0075325|FBtr0075324 16781837|16781837|16781837 16782419|16782419|16782419 3L + 16782030 16782191 3'utr CG9705 FlyBase G30940.1 AGCCGAAACCAGACCAGAACGTAATAGAATGGAACAACAGGCCTGCCATCCAGCCAGCCAGCGAGCAGCATCACAAGAGTTTCAATTGAACACTTAATTAGAATTTAAGCTAAGCTATGGAAGTCAAACAAAACGCAGTCACAAATATTGCCTTTCCCTCTG 43 16782073 0.942980018 12 41 168 0.960784314 1.69019608 0.254901961 0.186046512 0.31372549 43 2 0 49 3L:16782030-16782191 6 CG9705 FBtr0075325|FBtr0075324|FBtr0333607 16781837|16781837|16781837 16782419|16782419|16782419 TGCCAT 6mer2-7 dme-miR-263a-5p 3L + 16782040 16782098 3'utr CG9705 FlyBase G23411.1 AGACCAGAACGTAATAGAATGGAACAACAGGCCTGCCATCCAGCCAGCCAGCGAGCAGC 18 16782073 0.825946531 3 18 22 1 1.591064607 0.384615385 0.611111111 0.820512821 18 0 0 39 3L:16782040-16782098 6 20.5 2618 FBgn0036661 2532.823333 208.9866667 321.3 0.008093735 0.098092382 0.063803299 0 0 0 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 16782352 16782358 + 3L_16782352_16782358_+ 0.661615645 0.661615645 0.661615645 0 CG9705 FBtr0333607|FBtr0075325|FBtr0075324 16781837|16781837|16781837 16782419|16782419|16782419 3L + 16782329 16782433 3'utr CG9705 FlyBase G30941.2 TTAATTATAACAAAACATCTGAATGTGTTCGCGAAGCAAACAAGCAAAATGCTCTCAGTAATTCACTTTATTATTAAAACAGCTGCAAAACAATTCCATCGGTGA 47 16782352 0.97443808 7 42 255 0.942307692 1.69019608 0.288461538 0.106382979 0.192307692 47 3 0 49 3L:16782329-16782433 7 CG9705 FBtr0075325|FBtr0075324|FBtr0333607 16781837|16781837|16781837 16782419|16782419|16782419 TGTGTTC 7mer-m8 dme-miR-317-3p 3L + 16782331 16782366 3'utr CG9705 FlyBase G23413.1 AATTATAACAAAACATCTGAATGTGTTCGCGAAGCA 21 16782352 0.741387901 3 17 107 0.862068966 0.920818754 0.172413793 0.333333333 0.517241379 21 2 2 25 3L:16782331-16782366 7 29 2619 FBgn0036661 2532.823333 208.9866667 321.3 0.011449673 0.138764833 0.090258326 0 0 0 0.01 dme-miR-277-3p 6mer3-8 TGCATT 3L 16785143 16785148 + 3L_16785143_16785148_+ 1 1 1 0 CG9706 FBtr0075326|FBtr0075327 16785050|16785050 16785246|16785246 3L + 16785114 16785192 3'utr CG9706 FlyBase G30945.1 AACAACTAATTCTAGGATTAGCAGACGTTTGCATTCTGTAGGCTAGCGAAATTACAAATTCCCGCCTTGGTATTGTTTT 23 16785150 0.957349062 8 23 165 1 1.477121255 0.033333333 0.304347826 0.466666667 23 0 0 30 3L:16785114-16785192 6 CG9706 FBtr0075326|FBtr0075327 16785050|16785050 16785246|16785246 TGCATT 6mer3-8 dme-miR-277-3p 3L + 16785121 16785164 3'utr CG9706 FlyBase G23415.1 AATTCTAGGATTAGCAGACGTTTGCATTCTGTAGGCTAGCGAAA 9 16785142 0.974375068 3 9 61 1 1.204119983 0.375 0.555555556 0.75 9 0 0 16 3L:16785121-16785164 6 12.5 2620 FBgn0036662 379.6666667 23.33333333 36.06666667 0.032923617 0.535714286 0.346580407 -7 1 -3 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 16787755 16787760 - 3L_16787755_16787760_- 1 1 1 0 CG9674 FBtr0345074|FBtr0305916|FBtr0333608|FBtr0075344 16787571|16787571|16787571|16787571 16792436|16788409|16788409|16788409 3L - 16787738 16787788 3'utr CG9674 FlyBase G37476.1 GAACTGCATTCGACCGTTGACCGCAAATGTACCTAAGTGGCTATTGTTAAA 107 16787761 0.90662833 2 105 620 0.983870968 1.785329835 0.282258065 0.14953271 0.266129032 107 1 1 122 3L:16787738-16787788 6 CG9674 FBtr0075344|FBtr0305916|FBtr0333608|FBtr0345074 16787571|16787571|16787571|16787571 16788409|16788409|16788409|16792436 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L - 16787734 16787781 3'utr CG9674 FlyBase G28306.1 ATTCGACCGTTGACCGCAAATGTACCTAAGTGGCTATTGTTAAAACAA 43 16787761 0.894103356 2 42 230 0.986111111 1.851258349 0.291666667 0.441860465 0.666666667 43 1 0 71 3L:16787734-16787781 6 75 2621 FBgn0036663 1912.666667 32.48 50.08 0.039212269 2.3091133 1.497603834 1 1 1 0.01 dme-bantam-3p 7mer-m8 TGATCTC 3L 16787891 16787897 - 3L_16787891_16787897_- 0.661615243 0.661615243 0.661615243 0 CG9674 FBtr0345074|FBtr0305916|FBtr0333608|FBtr0075344 16787571|16787571|16787571|16787571 16792436|16788409|16788409|16788409 3L - 16787882 16787909 3'utr CG9674 FlyBase G37477.1 AAATTGATATGCTGATCTCCACCATCCT 15 16787898 0.690610132 4 12 90 0.909090909 1.301029996 0.454545455 0.2 0.454545455 15 2 0 20 3L:16787882-16787909 7 CG9674 FBtr0075344|FBtr0305916|FBtr0333608|FBtr0345074 16787571|16787571|16787571|16787571 16788409|16788409|16788409|16792436 TGATCTC 7mer-m8 dme-bantam-3p 3L - 16787882 16787911 3'utr CG9674 FlyBase G28307.1 GAAAATTGATATGCTGATCTCCACCATCCT 13 16787897 0.718071018 3 11 75 0.764705882 0.636822098 0.529411765 0.307692308 0.470588235 13 2 2 13 3L:16787882-16787911 7 14 2622 FBgn0036663 1912.666667 32.48 50.08 0.007319624 0.431034483 0.279552716 1 0 0.5 0.01 dme-miR-932-5p 7mer-m8 GGAATTG 3L 16788193 16788199 - 3L_16788193_16788199_- 0.70297287 0.70297287 0.70297287 0 CG9674 FBtr0345074|FBtr0305916|FBtr0333608|FBtr0075344 16787571|16787571|16787571|16787571 16792436|16788409|16788409|16788409 3L - 16788150 16788225 3'utr CG9674 FlyBase G37478.1 TTTTATTTTGATCGCAAAGCTGGCTGGGAATTGTTAGTGGTTCGTCGAGATGCCCTCCATATGATGATGATGATGA 31 16788175 0.918574944 6 29 214 0.947368421 1.556302501 0.184210526 0.193548387 0.342105263 31 2 0 36 3L:16788150-16788225 7 CG9674 FBtr0075344|FBtr0305916|FBtr0333608|FBtr0345074 16787571|16787571|16787571|16787571 16788409|16788409|16788409|16792436 GGAATTG 7mer-m8 dme-miR-932-5p 3L - 16788162 16788221 3'utr CG9674 FlyBase G28308.1 ATTTTGATCGCAAAGCTGGCTGGGAATTGTTAGTGGTTCGTCGAGATGCCCTCCATATGA 12 16788175 0.902798559 4 10 76 0.888888889 1.204119983 0.277777778 0.333333333 0.555555556 12 2 0 16 3L:16788162-16788221 7 9.5 2623 FBgn0036663 1912.666667 32.48 50.08 0.004966887 0.292487685 0.189696486 -24 -24 -24 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 16789153 16789158 - 3L_16789153_16789158_- 0.730949445 0.730949445 0.730949445 0 CG9674 FBtr0345074|FBtr0345074|FBtr0345074|FBtr0333609|FBtr0333609|FBtr0333609|FBtr0305915|FBtr0305915|FBtr0305915 16787571|16787571|16787571|16788247|16788247|16788247|16788247|16788247|16788247 16792436|16792436|16792436|16792331|16792331|16792331|16792331|16792331|16792331 3L - 16789124 16789174 5'utr CG9674 FlyBase G37483.1 CTGCCGCTGGCAAGAATGTGATCATCATCGGCGGTGGCGATACCGGATGCG 11 16789140 0.860174076 4 9 46 0.933333333 1.146128036 0.133333333 0.090909091 0.333333333 11 1 0 14 3L:16789124-16789174 6 CG9674 FBtr0333609|FBtr0333609|FBtr0333609|FBtr0305915|FBtr0305915|FBtr0305915|FBtr0345074|FBtr0345074|FBtr0345074 16788247|16788247|16788247|16788247|16788247|16788247|16787571|16787571|16787571 16792331|16792331|16792331|16792331|16792331|16792331|16792436|16792436|16792436 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 16789094 16789175 5'utr CG9674 FlyBase G28310.1 TCTGCCGCTGGCAAGAATGTGATCATCATCGGCGGTGGCGATACCGGATGCGATTGCATTGCCACGTCGTTGCGTCAAGGCG 8 16789140 0.961621248 5 8 44 1 1.041392685 0.090909091 0.375 0.545454545 8 0 0 11 3L:16789094-16789175 6 4.5 2624 FBgn0036663 1912.666667 32.48 50.08 0.002352736 0.138546798 0.08985623 -18 -18 -18 0.01 dme-miR-8-3p 6mer3-8 CAGTAT 3L 16789590 16789595 - 3L_16789590_16789595_- 1 1 1 0 CG9674 FBtr0345074|FBtr0333609|FBtr0305915 16787571|16788247|16788247 16792436|16792331|16792331 3L - 16789574 16789622 5'utr CG9674 FlyBase G37486.1 CGCAACGATCGCGTTGGTGGACTTTTGCAGTATGGTATTCCCACGATGA 11 16789606 0.851354766 6 11 78 1 1.230448921 0.294117647 0.454545455 0.647058824 11 0 0 17 3L:16789574-16789622 6 CG9674 FBtr0333609|FBtr0305915|FBtr0345074 16788247|16788247|16787571 16792331|16792331|16792436 CAGTAT 6mer3-8 dme-miR-8-3p 3L - 16789554 16789625 5'utr CG9674 FlyBase G28311.1 GAGCGCAACGATCGCGTTGGTGGACTTTTGCAGTATGGTATTCCCACGATGAAGCTTTCCAAGGAGGTGGTC 7 16789598 0.983758966 4 7 55 1 1.113943352 0.384615385 0.428571429 0.692307692 7 0 0 13 3L:16789554-16789625 6 5.5 2625 FBgn0036663 1912.666667 32.48 50.08 0.002875566 0.169334975 0.109824281 11 3 7 0.01 dme-miR-1003-3p 6mer2-7 TGTGAG 3L 16857476 16857481 + 3L_16857476_16857481_+ 1 1 1 0 sina FBtr0075333|FBtr0075332|FBtr0344230 16857361|16857361|16857361 16858712|16858712|16858712 3L + 16857453 16857501 3'utr sina FlyBase G30993.2 AGGCGTCTAACTCGTGGACAGATTGTGAGTCTGGAGATTAAGAAGAAAG 24 16857477 0.676598129 7 22 117 1 1.462397998 0.551724138 0.166666667 0.310344828 24 0 0 29 3L:16857453-16857501 6 sina FBtr0075333|FBtr0075332|FBtr0344230 16857361|16857361|16857361 16858712|16858712|16858712 TGTGAG 6mer2-7 dme-miR-1003-3p 3L + 16857429 16857519 3'utr sina FlyBase G23452.1 AGTTTATAGCCCTCTGTTCGCATCAGGCGTCTAACTCGTGGACAGATTGTGAGTCTGGAGATTAAGAAGAAAGAGTTTTGCAGAGTTGTTT 23 16857477 0.969975085 8 23 135 1 1.544068044 0.485714286 0.347826087 0.571428571 23 0 0 35 3L:16857429-16857519 6 19 2626 FBgn0003410 433.1466667 16.57 25.46666667 0.04386505 1.146650573 0.746073298 -1 -1 -1 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3L 16857928 16857933 + 3L_16857928_16857933_+ 1 1 1 0 sina FBtr0075333|FBtr0075332|FBtr0344230 16857361|16857361|16857361 16858712|16858712|16858712 3L + 16857906 16857942 3'utr sina FlyBase G30996.1 GTTTAATCGGTTCGATTGGTACTCTAGTTCTAGGACA 38 16857921 0.787543469 4 38 344 1 1.643452676 0.113636364 0.131578947 0.25 38 0 0 44 3L:16857906-16857942 6 sina FBtr0075333|FBtr0075332|FBtr0344230 16857361|16857361|16857361 16858712|16858712|16858712 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 16857908 16857951 3'utr sina FlyBase G23453.1 TTAATCGGTTCGATTGGTACTCTAGTTCTAGGACATGATTTTTC 24 16857921 0.779171648 6 23 208 1 1.51851394 0.03030303 0.333333333 0.515151515 24 0 0 33 3L:16857908-16857951 6 30.5 2627 FBgn0003410 433.1466667 16.57 25.46666667 0.070414948 1.84067592 1.197643979 7 7 7 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3L 16858202 16858207 + 3L_16858202_16858207_+ 1 0.999717759 0.999858879 0.000199546 sina FBtr0075333|FBtr0075332|FBtr0344230 16857361|16857361|16857361 16858712|16858712|16858712 3L + 16858159 16858214 3'utr sina FlyBase G30998.1 AAGGCGAGGAGGTCACTCATCCACTCGAACATGTACTGCAAAGTCTAGTTTAGTTA 16 16858190 0.964065977 5 15 92 0.947368421 0.954242509 0.157894737 0.1875 0.315789474 16 0 1 18 3L:16858159-16858214 6 sina FBtr0075333|FBtr0075332|FBtr0344230 16857361|16857361|16857361 16858712|16858712|16858712 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 16858166 16858214 3'utr sina FlyBase G23455.1 GGAGGTCACTCATCCACTCGAACATGTACTGCAAAGTCTAGTTTAGTTA 19 16858190 0.93595423 4 18 111 0.923076923 1.380211242 0.115384615 0.368421053 0.538461538 19 2 0 24 3L:16858166-16858214 6 13.5 2628 FBgn0003410 433.1466667 16.57 25.46666667 0.031167272 0.814725407 0.530104712 12 12 12 0.01 dme-miR-318-3p 6mer3-8 CCCAGT 3L 16968160 16968165 + 3L_16968160_16968165_+ 1 1 1 0 Nc73EF FBtr0075263|FBtr0075266 16967480|16967480 16968724|16968724 3L + 16968155 16968202 3'utr Nc73EF FlyBase G31043.1 TACTCCCCAGTAAATTGGACTGGAAGCTTTGATTACGATTCTCAACAA 8 16968169 0.967832417 4 8 44 1 1.041392685 0.363636364 0.25 0.454545455 8 0 0 11 3L:16968155-16968202 6 Nc73EF FBtr0075266|FBtr0075263 16967480|16967480 16968724|16968724 CCCAGT 6mer3-8 dme-miR-318-3p 3L + 16968157 16968183 3'utr Nc73EF FlyBase G23489.1 CTCCCCAGTAAATTGGACTGGAAGCTT 5 16968169 0.752529848 2 4 21 1 0.84509804 0 0.2 0.428571429 5 0 0 7 3L:16968157-16968183 6 5 2629 FBgn0010352 1272.733333 40.25666667 61.91 0.003928553 0.124203031 0.080762397 -9 -9 -9 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 16994230 16994236 + 3L_16994230_16994236_+ 0.754178771 0.754178795 0.754178783 0 Exn FBtr0302649|FBtr0302649|FBtr0302649|FBtr0302651|FBtr0302651|FBtr0302651|FBtr0302650|FBtr0302650|FBtr0302650|FBtr0302647|FBtr0302647|FBtr0302647|FBtr0302648|FBtr0302648|FBtr0302648 16994140|16994140|16994140|16994140|16994140|16994140|16994140|16994140|16994140|16994140|16994140|16994140|16994140|16994140|16994140 16994388|16994388|16994388|16994388|16994388|16994388|16994388|16994388|16994388|16994388|16994388|16994388|16994388|16994388|16994388 3L + 16994190 16994248 3'utr Exn FlyBase G31049.1 ACTCCATAGTCCGCAACCAATAGCCGTACACTTTAGGAAATGTGATAATTATTTAAATC 25 16994238 0.986633424 8 21 183 0.84375 1.431363764 0 0.2 0.375 25 5 0 27 3L:16994190-16994248 7 Exn FBtr0302648|FBtr0302648|FBtr0302648|FBtr0302650|FBtr0302650|FBtr0302650|FBtr0302647|FBtr0302647|FBtr0302647|FBtr0302649|FBtr0302649|FBtr0302649|FBtr0302651|FBtr0302651|FBtr0302651 16994140|16994140|16994140|16994140|16994140|16994140|16994140|16994140|16994140|16994140|16994140|16994140|16994140|16994140|16994140 16994388|16994388|16994388|16994388|16994388|16994388|16994388|16994388|16994388|16994388|16994388|16994388|16994388|16994388|16994388 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 16994208 16994242 3'utr Exn FlyBase G23492.1 AATAGCCGTACACTTTAGGAAATGTGATAATTATT 11 16994222 0.698132704 4 9 83 0.8 1.079181246 0 0.363636364 0.533333333 11 3 0 12 3L:16994208-16994242 7 15.5 2630 FBgn0261547 727.6666667 13.01 19.84 0.021300962 1.191391238 0.78125 -8 8 0 0.01 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 16994830 16994836 - 3L_16994830_16994836_- 0.823349562 0.823349562 0.823349562 0 CG3764 FBtr0321285|FBtr0075297|FBtr0332122 16994715|16994715|16994715 16995408|16995408|16995408 3L - 16994823 16994858 3'utr CG3764 FlyBase G37507.1 AAGTTTAGAATACGCTAGGGATGCAGCTACTAAAAT 35 16994837 0.819794337 4 32 162 0.925 0.966141733 0.225 0.114285714 0.225 35 0 3 37 3L:16994823-16994858 7 CG3764 FBtr0332122|FBtr0321285|FBtr0075297 16994715|16994715|16994715 16995408|16995408|16995408 GCAGCTA 7mer-A1 dme-miR-980-3p 3L - 16994823 16994858 3'utr CG3764 FlyBase G28331.1 AAGTTTAGAATACGCTAGGGATGCAGCTACTAAAAT 29 16994837 0.797038955 4 26 112 0.930232558 1.301029996 0.11627907 0.379310345 0.581395349 29 2 1 40 3L:16994823-16994858 7 31.5 2631 FBgn0036684 919.4833333 18.43 28.02333333 0.03425837 1.709169832 1.124063281 1 1 1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 16995271 16995277 - 3L_16995271_16995277_- 0.801970437 0.801970437 0.801970437 0 CG3764 FBtr0321285|FBtr0321285|FBtr0321285|FBtr0075297|FBtr0075297|FBtr0075297|FBtr0332122|FBtr0332122|FBtr0332122 16994715|16994715|16994715|16994715|16994715|16994715|16994715|16994715|16994715 16995408|16995408|16995408|16995408|16995408|16995408|16995408|16995408|16995408 3L - 16995191 16995444 stop_codon CG3764 FlyBase G37509.2 AAGATCAGCCGCAAGTGCGGCATCAGCTTCAGGTGACAGGTTGTTGCCGTCTGCTGAGCTAGGACATTGCCAAACATTTTATCACTCAACGTTTCAAAGAGCTCTTCTCATGCATCATCCAAAGCGAAACAAGCAAATACTCCAGCGAATTTTAATTTCACTGATTTTGTGATATATTTATATATGTGTAGGAATCTAGCGCCTAAATGCAGGATACGTTTATGAGCCGTAGCTTAGCCGTAGCCCTCGAACGA 438 16995279 0.941714361 46 399 4122 0.914342629 1.457692703 0.109561753 0.116438356 0.229083665 438 28 15 459 3L:16995191-16995444 7 CG3764 FBtr0332122|FBtr0332122|FBtr0332122|FBtr0321285|FBtr0321285|FBtr0321285|FBtr0075297|FBtr0075297|FBtr0075297 16994715|16994715|16994715|16994715|16994715|16994715|16994715|16994715|16994715 16995408|16995408|16995408|16995408|16995408|16995408|16995408|16995408|16995408 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 16995196 16995461 stop_codon CG3764 FlyBase G28333.2 CATATATTCACACGCCCAAGATCAGCCGCAAGTGCGGCATCAGCTTCAGGTGACAGGTTGTTGCCGTCTGCTGAGCTAGGACATTGCCAAACATTTTATCACTCAACGTTTCAAAGAGCTCTTCTCATGCATCATCCAAAGCGAAACAAGCAAATACTCCAGCGAATTTTAATTTCACTGATTTTGTGATATATTTATATATGTGTAGGAATCTAGCGCCTAAATGCAGGATACGTTTATGAGCCGTAGCTTAGCCGTAGCCCTCG 313 16995279 0.989109754 38 262 2654 0.856275304 1.450249108 0.133603239 0.38658147 0.611336032 313 57 14 423 3L:16995196-16995461 7 193.5 2632 FBgn0036684 919.4833333 18.43 28.02333333 0.210444271 10.49918611 6.904960152 2 2 2 0.01 dme-miR-2a-2-5p 7mer-A1 GATGAGA 3L 17013051 17013057 - 3L_17013051_17013057_- 0.782911824 0.782911824 0.782911824 0 CG6664 FBtr0075293|FBtr0075294|FBtr0075295 17012884|17012884|17012884 17013449|17013449|17013449 3L - 17013025 17013092 3'utr CG6664 FlyBase G37540.1 AACACAGCTAATAATGAGATATGGAGGATATAGAGGATGAGAATGAGGATGGACAGCACACGCTAACC 32 17013055 0.953035123 4 30 135 0.942857143 1.51851394 0.114285714 0.09375 0.171428571 32 2 0 33 3L:17013025-17013092 7 CG6664 FBtr0075294|FBtr0075295|FBtr0075293 17012884|17012884|17012884 17013449|17013449|17013449 GATGAGA 7mer-A1 dme-miR-2a-2-5p 3L - 17013006 17013077 3'utr CG6664 FlyBase G28354.1 GAGATATGGAGGATATAGAGGATGAGAATGAGGATGGACAGCACACGCTAACCAGATCGTATGAATTTATAA 32 17013055 0.937619131 4 31 122 0.960784314 1.69019608 0.31372549 0.46875 0.666666667 32 2 0 49 3L:17013006-17013077 7 30.5 2633 FBgn0036685 1328.326667 65.44 100.8833333 0.022961219 0.466075795 0.302329423 -2 -2 -2 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 3L 17013413 17013418 - 3L_17013413_17013418_- 0.923299619 1 0.96164981 0.054235373 CG6664 FBtr0075293|FBtr0075294|FBtr0075295 17012884|17012884|17012884 17013449|17013449|17013449 3L - 17013396 17013422 3'utr CG6664 FlyBase G37543.1 TACAGAAAAATCATGACTTATTCACAC 9 17013402 0.737160672 3 8 42 0.9 0.653212514 0.1 0.111111111 0.2 9 0 1 9 3L:17013396-17013422 6 CG6664 FBtr0075294|FBtr0075295|FBtr0075293 17012884|17012884|17012884 17013449|17013449|17013449 GAAAAA 6mer3-8 dme-miR-980-5p 3L - 17013393 17013458 stop_codon CG6664 FlyBase G28357.1 AAGGACTAGGAGGATGCAGTAGCTCTCGCACAGGGATACAGAAAAATCATGACTTATTCACACACT 10 17013402 0.954140204 4 10 48 1 1.204119983 0.125 0.5 0.6875 10 0 0 16 3L:17013393-17013458 6 8 2634 FBgn0036685 1328.326667 65.44 100.8833333 0.006022615 0.122249389 0.079299521 -16 -16 -16 0.01 dme-miR-33-5p 8mer-A1 CAATGCAA 3L 17026910 17026917 + 3L_17026910_17026917_+ 0.634552243 0.341178044 0.487865143 0.207446886 Fit2 FBtr0075275 17026804 17027117 3L + 17026871 17026933 3'utr Fit2 FlyBase G31065.1 ACTGTTTTAACTGATAACCAACTGATAGACTCACAACTTCAATGCAATACATGTATTTAATTT 178 17026896 0.796616357 5 169 802 0.966824645 2.008600172 0.004739336 0.175141243 0.308056872 177 6 1 204 3L:17026871-17026933 8 Fit2 FBtr0075275 17026804 17027117 CAATGCAA 8mer-A1 dme-miR-33-5p 3L + 17026873 17026921 3'utr Fit2 FlyBase G23500.1 TGTTTTAACTGATAACCAACTGATAGACTCACAACTTCAATGCAATACA 141 17026896 0.796238215 6 136 574 0.955156951 1.726319612 0.004484305 0.397163121 0.618834081 141 7 3 213 3L:17026873-17026921 8 43.5 2635 FBgn0036688 86.10666667 3.683333333 5.58 0.505187365 11.80995475 7.795698925 14 14 14 0.01 dme-bantam-3p 6mer2-7 GATCTC 3L 17037339 17037344 - 3L_17037339_17037344_- 1 1 1 0 scaf6 FBtr0345067 17036857 17039577 3L - 17037326 17037364 5'utr scaf6 FlyBase G37551.1 AAGACGAGTGGACCGCGACAGATCTCTAACACCTCCGAG 41 17037338 0.782007136 2 41 125 1 1.662757832 0.543478261 0.12195122 0.217391304 41 0 0 46 3L:17037326-17037364 6 scaf6 FBtr0345067 17036857 17039577 GATCTC 6mer2-7 dme-bantam-3p 3L - 17037330 17037427 5'utr scaf6 FlyBase G28361.1 CAGAGAGGGCCGTGGTGATCGTGGCAATTCCAATAGCCGAGACAATGGCAACAGCACCAACCTAAGACGAGTGGACCGCGACAGATCTCTAACACCTC 23 17037338 0.907992266 6 21 71 1 1.477121255 0.4 0.260869565 0.433333333 23 0 0 30 3L:17037330-17037427 6 29 2636 FBgn0261872 719.3333333 34.71333333 53.11 0.040315107 0.835413866 0.546036528 -6 -6 -6 0.01 dme-bantam-3p 6mer2-7 GATCTC 3L 17037468 17037473 - 3L_17037468_17037473_- 1 1 1 0 scaf6 FBtr0345067 17036857 17039577 3L - 17037447 17037486 5'utr scaf6 FlyBase G37552.1 AAGGGTCGCAATCGATCTCCTCGCCACGAACGGGACAACA 6 17037466 0.940005926 2 6 24 1 0.77815125 0.166666667 0 0 6 0 0 6 3L:17037447-17037486 6 scaf6 FBtr0345067 17036857 17039577 GATCTC 6mer2-7 dme-bantam-3p 3L - 17037455 17037496 5'utr scaf6 FlyBase G28362.1 TAACAACCGCAAGGGTCGCAATCGATCTCCTCGCCACGAACG 6 17037475 0.937522995 3 6 24 1 0.903089987 0.5 0.333333333 0.5 6 0 0 8 3L:17037455-17037496 6 6 2637 FBgn0261872 719.3333333 34.71333333 53.11 0.008341057 0.172844248 0.112973075 -7 2 -2.5 0.01 dme-miR-2b-2-5p 7mer-A1 TGAAGAA 3L 17037826 17037832 - 3L_17037826_17037832_- 0.823349562 0.823349562 0.823349562 0 scaf6 FBtr0345067 17036857 17039577 3L - 17037831 17037872 5'utr scaf6 FlyBase G37553.1 GAGGGTTGGGAGAAGCTTGGTCTCTATGAGTACTATAAGGTG 7 17037856 0.959625878 3 6 53 0.875 0.84509804 0.875 0.142857143 0.25 7 1 0 7 3L:17037831-17037872 1 scaf6 FBtr0345067 17036857 17039577 TGAAGAA 7mer-A1 dme-miR-2b-2-5p 3L - 17037824 17037872 5'utr scaf6 FlyBase G28363.1 GAGGGTTGGGAGAAGCTTGGTCTCTATGAGTACTATAAGGTGAAGAATG 5 17037846 0.980733 3 5 38 1 0.903089987 0.125 0.6 0.75 5 0 0 8 3L:17037824-17037872 7 1 2638 FBgn0261872 719.3333333 34.71333333 53.11 0.001390176 0.028807375 0.018828846 24 14 19 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3L 17041316 17041322 - 3L_17041316_17041322_- 0.823349029 0.823349562 0.823349296 4.24E-07 scaf6 FBtr0301554 17040932 17041684 3L - 17041291 17041347 5'utr scaf6 FlyBase G37556.1 ATATACTTTCGGACTTAAATGATTTCCAAAGATATTGTCATAGACTCATAGATGGCA 6 17041324 0.98004601 3 6 48 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3L:17041291-17041347 7 scaf6 FBtr0301554 17040932 17041684 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 17041292 17041338 5'utr scaf6 FlyBase G28366.1 CGGACTTAAATGATTTCCAAAGATATTGTCATAGACTCATAGATGGC 10 17041324 0.753904865 4 10 71 1 1.041392685 0 0.1 0.181818182 10 0 0 11 3L:17041292-17041338 7 7 2639 FBgn0261872 719.3333333 34.71333333 53.11 0.009731233 0.201651623 0.131801921 2 2 2 0.01 dme-miR-932-5p 7mer-A1 GAATTGA 3L 17054769 17054775 + 3L_17054769_17054775_+ 0.823349562 0.823349562 0.823349562 0 rogdi FBtr0075282|FBtr0075283 17054365|17054365 17055454|17055454 3L + 17054726 17054822 3'utr rogdi FlyBase G31086.1 CTCCAATTATGCATCAAAATGCATCTAAATAGCATTAGGCTGAGAATTGAGAACAGAGAACGTTTGTGAAAACCAATTGTGTTTGTATGTGTAACAA 53 17054760 0.927686308 10 53 244 1 1.806179974 0.265625 0.132075472 0.28125 53 0 0 64 3L:17054726-17054822 7 rogdi FBtr0075283|FBtr0075282 17054365|17054365 17055454|17055454 GAATTGA 7mer-A1 dme-miR-932-5p 3L + 17054746 17054821 3'utr rogdi FlyBase G23516.1 GCATCTAAATAGCATTAGGCTGAGAATTGAGAACAGAGAACGTTTGTGAAAACCAATTGTGTTTGTATGTGTAACA 36 17054772 0.688269252 8 35 150 1 1.77815125 0.133333333 0.444444444 0.666666667 36 0 0 60 3L:17054746-17054821 7 35 2640 FBgn0036697 653.9633333 39.12 59.84 0.05351982 0.894683027 0.584893048 9 -3 3 0.01 dme-miR-252-5p 7mer-m8 GTACTTA 3L 17055319 17055325 + 3L_17055319_17055325_+ 0.588299917 0.588299917 0.588299917 0 rogdi FBtr0075282|FBtr0075283 17054365|17054365 17055454|17055454 3L + 17055306 17055331 3'utr rogdi FlyBase G31088.1 AACAATTACCACTGTACTTATTGAAT 8 17055318 0.7761632 3 8 58 1 1.041392685 0 0.375 0.545454545 8 0 0 11 3L:17055306-17055331 7 rogdi FBtr0075283|FBtr0075282 17054365|17054365 17055454|17055454 GTACTTA 7mer-m8 dme-miR-252-5p 3L + 17055299 17055328 3'utr rogdi FlyBase G23518.1 CAACGAAAACAATTACCACTGTACTTATTG 8 17055318 0.96245563 3 7 52 0.909090909 1 0.636363636 0.25 0.454545455 8 1 0 10 3L:17055299-17055328 7 8 2641 FBgn0036697 653.9633333 39.12 59.84 0.012233102 0.204498978 0.13368984 1 1 1 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 3L 1715808 1715813 - 3L_1715808_1715813_- 1 1 1 0 drpr FBtr0334079|FBtr0334080|FBtr0072798|FBtr0334078|FBtr0309845|FBtr0072799 1715708|1715593|1715593|1715708|1715708|1715593 1716299|1716704|1716299|1716299|1716704|1716299 3L - 1715785 1715848 3'utr drpr FlyBase G33454.1 TAAATCGAACCCATGCATATACAGATTGAAATCAATAGCTTAAGTATATGGTATTTATATTTTT 41 1715823 0.978939775 6 41 285 1 1.698970004 0.08 0.195121951 0.34 41 0 0 50 3L:1715785-1715848 6 drpr FBtr0072798|FBtr0334078|FBtr0309845|FBtr0072799|FBtr0334079|FBtr0334080 1715593|1715708|1715708|1715593|1715708|1715593 1716299|1716299|1716704|1716299|1716299|1716704 TAGCTT 6mer3-8 dme-miR-79-3p 3L - 1715792 1715898 3'utr drpr FlyBase G25305.1 AATTGCAGAGTGCCTGTGAGACAAACTCGGATCGGAGGTTGCAATAATTTTAAATCGAACCCATGCATATACAGATTGAAATCAATAGCTTAAGTATATGGTATTTA 32 1715823 0.971959575 10 31 185 0.976744186 1.62324929 0.186046512 0.28125 0.465116279 32 1 0 42 3L:1715792-1715898 6 26 2642 FBgn0027594 1820.973333 52.11666667 79.25333333 0.014278078 0.498880716 0.328061911 10 10 10 0.01 dme-miR-1003-3p 7mer-A1 TGTGAGA 3L 1715878 1715884 - 3L_1715878_1715884_- 0.598382561 0.598382561 0.598382561 0 drpr FBtr0334079|FBtr0334080|FBtr0072798|FBtr0334078|FBtr0309845|FBtr0072799 1715708|1715593|1715593|1715708|1715708|1715593 1716299|1716704|1716299|1716299|1716704|1716299 3L - 1715856 1715913 3'utr drpr FlyBase G33455.1 ACCTCTTCCTGGTAAAATTGCAGAGTGCCTGTGAGACAAACTCGGATCGGAGGTTGCA 21 1715882 0.957717069 9 20 94 0.96 1.380211242 0.28 0.095238095 0.24 21 1 0 24 3L:1715856-1715913 7 drpr FBtr0072798|FBtr0334078|FBtr0309845|FBtr0072799|FBtr0334079|FBtr0334080 1715593|1715708|1715708|1715593|1715708|1715593 1716299|1716299|1716704|1716299|1716299|1716704 TGTGAGA 7mer-A1 dme-miR-1003-3p 3L - 1715792 1715898 3'utr drpr FlyBase G25305.1 AATTGCAGAGTGCCTGTGAGACAAACTCGGATCGGAGGTTGCAATAATTTTAAATCGAACCCATGCATATACAGATTGAAATCAATAGCTTAAGTATATGGTATTTA 32 1715882 0.971959575 10 31 185 0.976744186 1.62324929 0.186046512 0.28125 0.465116279 32 1 0 42 3L:1715792-1715898 7 14 2643 FBgn0027594 1820.973333 52.11666667 79.25333333 0.007688196 0.268628078 0.176648721 -2 -2 -2 0.01 dme-miR-276a-3p 6mer3-8 AGTTCC 3L 1716321 1716326 - 3L_1716321_1716326_- 1 1 1 0 drpr FBtr0334080|FBtr0309845 1715593|1715708 1716704|1716704 3L - 1716305 1716359 3'utr drpr FlyBase G33460.1 ACCAACCTGGACAACGTGTCGACGGCGTCGCCTAGTTCCAGTCCGAAATTTCTAA 7 1716324 0.9526497 4 7 32 1 1 0 0.428571429 0.6 7 0 0 10 3L:1716305-1716359 6 drpr FBtr0309845|FBtr0334080 1715708|1715593 1716704|1716704 AGTTCC 6mer3-8 dme-miR-276a-3p 3L - 1716313 1716345 3'utr drpr FlyBase G25308.1 CGTGTCGACGGCGTCGCCTAGTTCCAGTCCGAA 5 1716324 0.739953545 2 5 26 1 0.84509804 0.285714286 0.2 0.428571429 5 0 0 7 3L:1716313-1716345 6 5 2644 FBgn0027594 1820.973333 52.11666667 79.25333333 0.002745784 0.095938599 0.063088829 -2 -2 -2 0.01 dme-miR-283-5p 8mer-m1 TGATATTT 3L 174070 174077 + 3L_174070_174077_+ 0.549118078 0.516174323 0.532646201 0.023294784 p130CAS FBtr0299866|FBtr0072475|FBtr0299864|FBtr0299865|FBtr0301889 173907|173907|173907|173907|173907 174517|174517|174517|174517|174517 3L + 174048 174092 3'utr p130CAS FlyBase G26680.1 TTGCCGCTTATATTTTGCATTGTGATATTTTGAGCAAAACATCTG 23 174067 0.988120099 9 20 254 0.891891892 1.041392685 0.054054054 0.347826087 0.594594595 23 2 2 33 3L:174048-174092 8 p130CAS FBtr0299865|FBtr0299864|FBtr0072475|FBtr0299866|FBtr0301889 173907|173907|173907|173907|173907 174517|174517|174517|174517|174517 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 174049 174086 3'utr p130CAS FlyBase G20176.1 TGCCGCTTATATTTTGCATTGTGATATTTTGAGCAAAA 16 174066 0.664186215 5 14 176 0.769230769 0.823908741 0.269230769 0.4375 0.653846154 16 4 2 20 3L:174049-174086 8 19.5 2645 FBgn0035101 655.3333333 27.27 41.73 0.029755849 0.715071507 0.46728972 3 4 3.5 0.01 dme-miR-184-5p 8mer-m1 TGATAAGG 3L 17429142 17429149 - 3L_17429142_17429149_- 0.614713882 0.614713882 0.614713882 0 frc FBtr0299820 17428934 17431853 3L - 17429122 17429175 stop_codon frc FlyBase G37592.1 TGGGCATTACTGTGCTGAATAAAGCTTGATAAGGCTGTTTATTTTTAAGCCCAT 36 17429146 0.991150602 4 34 364 0.948717949 1.091080469 0.102564103 0.055555556 0.128205128 36 0 2 37 3L:17429122-17429175 8 frc FBtr0299820 17428934 17431853 TGATAAGG 8mer-m1 dme-miR-184-5p 3L - 17429124 17429165 stop_codon frc FlyBase G28385.1 TGTGCTGAATAAAGCTTGATAAGGCTGTTTATTTTTAAGCCC 10 17429146 0.883782039 3 10 93 1 1.204119983 0.125 0.4 0.625 10 0 0 16 3L:17429124-17429165 8 22 2646 FBgn0042641 378.7 26.37333333 40.25 0.058093478 0.834175935 0.546583851 -3 -3 -3 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 17431536 17431542 - 3L_17431536_17431542_- 0.661615645 0.661615645 0.661615645 0 frc FBtr0299820 17428934 17431853 3L - 17431520 17431606 5'utr frc FlyBase G37593.1 AAGAAATAGAAATACACAGACTTCCACTCCTCCGCCTACGGAATGGGTGGGCCAGATAAACAATTGTGTTCCGTCTTCTGTTCCATT 53 17431563 0.883225139 10 49 258 0.935483871 1.286306739 0.064516129 0.132075472 0.258064516 53 2 2 58 3L:17431520-17431606 7 frc FBtr0299820 17428934 17431853 TGTGTTC 7mer-m8 dme-miR-317-3p 3L - 17431525 17431606 5'utr frc FlyBase G28386.1 AAGAAATAGAAATACACAGACTTCCACTCCTCCGCCTACGGAATGGGTGGGCCAGATAAACAATTGTGTTCCGTCTTCTGTT 35 17431543 0.852131848 9 31 184 0.883333333 1.423245874 0.05 0.485714286 0.7 35 6 1 53 3L:17431525-17431606 7 10 2647 FBgn0042641 378.7 26.37333333 40.25 0.026406126 0.37917088 0.248447205 21 1 11 0.01 dme-miR-190-5p 6mer3-8 ACATAT 3L 17431709 17431714 - 3L_17431709_17431714_- 1 1 1 0 frc FBtr0075228|FBtr0299820 17431580|17428934 17431853|17431853 3L - 17431700 17431740 5'utr frc FlyBase G37595.1 ACAACCACACAGCGCATCGTCTCTGTACATATATCTAGCTA 26 17431717 0.70971204 3 21 143 0.868421053 1.217483944 0.026315789 0.307692308 0.526315789 26 4 1 33 3L:17431700-17431740 6 frc FBtr0075228|FBtr0299820 17431580|17428934 17431853|17431853 ACATAT 6mer3-8 dme-miR-190-5p 3L - 17431702 17431792 5'utr frc FlyBase G28388.1 GTACTTCAATTGCGATCTGCGATTCGCGACAACGTTCGTATTTGATTTTCCTACAACCACACAGCGCATCGTCTCTGTACATATATCTAGC 35 17431718 0.679403284 11 32 223 0.944444444 1.707570176 0.018518519 0.457142857 0.648148148 35 3 0 51 3L:17431702-17431792 6 14.5 2648 FBgn0042641 378.7 26.37333333 40.25 0.038288883 0.549797776 0.360248447 3 4 3.5 0.01 dme-miR-252-5p 6mer3-8 GTACTT 3L 17431787 17431792 - 3L_17431787_17431792_- 1 1 1 0 frc FBtr0075228|FBtr0299820 17431580|17428934 17431853|17431853 3L - 17431751 17431792 5'utr frc FlyBase G37595.2 GTACTTCAATTGCGATCTGCGATTCGCGACAACGTTCGTATT 45 17431781 0.688156702 5 40 276 0.888888889 1.380211242 0.092592593 0.133333333 0.277777778 45 5 1 48 3L:17431751-17431792 6 frc FBtr0075228|FBtr0299820 17431580|17428934 17431853|17431853 GTACTT 6mer3-8 dme-miR-252-5p 3L - 17431702 17431792 5'utr frc FlyBase G28388.1 GTACTTCAATTGCGATCTGCGATTCGCGACAACGTTCGTATTTGATTTTCCTACAACCACACAGCGCATCGTCTCTGTACATATATCTAGC 35 17431779 0.679403284 11 32 223 0.944444444 1.707570176 0.018518519 0.457142857 0.648148148 35 3 0 51 3L:17431702-17431792 6 13.5 2649 FBgn0042641 378.7 26.37333333 40.25 0.03564827 0.511880688 0.335403727 -11 -13 -12 0.01 dme-miR-34-5p 6mer3-8 CACTGC 3L 17466564 17466569 + 3L_17466564_17466569_+ 1 1 1 0 CG7603 FBtr0075220 17466555 17466768 3L + 17466485 17466606 stop_codon CG7603 FlyBase G31103.1 AAGGACACGTTCCAGGACTTTGCCCAATCCCCAGCCATCGCCGGCGGTGCGGAGTCCAGTCCGCCGAAGTAACCTGACCCACTGCTCTTCAATGGCAGGCTGTTTTCGTGTTAGCTCATAGT 75 17466589 0.990202365 10 68 678 0.91011236 1.908485019 0.269662921 0.16 0.292134831 75 8 0 81 3L:17466485-17466606 6 CG7603 FBtr0075220 17466555 17466768 CACTGC 6mer3-8 dme-miR-34-5p 3L + 17466555 17466603 stop_codon CG7603 FlyBase G23529.1 AACCTGACCCACTGCTCTTCAATGGCAGGCTGTTTTCGTGTTAGCTCAT 41 17466589 0.675771478 7 37 375 0.928571429 1.716003344 0.392857143 0.317073171 0.5 41 4 0 52 3L:17466555-17466603 6 45 2650 FBgn0036726 197 32.95333333 50.09333333 0.228426396 1.365567469 0.89832313 -25 -25 -25 0.01 dme-miR-184-5p 6mer2-7 GATAAG 3L 17466665 17466670 + 3L_17466665_17466670_+ 1 1 1 0 CG7603 FBtr0075220 17466555 17466768 3L + 17466619 17466726 3'utr CG7603 FlyBase G31104.1 TAATGTCGTTGTAATGTGTCGTTATTCCTCGATCCGCTCGCCAGCGGATAAGCGACTATAGATCTGTTCTCGACGTACTGAAACGCATCGAACTGGAACGTCCAGTTT 20 17466684 0.975888397 8 20 132 1 1.397940009 0.12 0.1 0.28 20 0 0 25 3L:17466619-17466726 6 CG7603 FBtr0075220 17466555 17466768 GATAAG 6mer2-7 dme-miR-184-5p 3L + 17466644 17466706 3'utr CG7603 FlyBase G23530.1 TCCTCGATCCGCTCGCCAGCGGATAAGCGACTATAGATCTGTTCTCGACGTACTGAAACGCAT 10 17466685 0.969137332 6 9 51 0.909090909 1 0.363636364 0.1 0.181818182 10 1 0 10 3L:17466644-17466706 6 6 2651 FBgn0036726 197 32.95333333 50.09333333 0.030456853 0.182075663 0.119776417 -19 -20 -19.5 0.01 dme-miR-970-3p 8mer-A1 TCTTATGA 3L 17477817 17477824 - 3L_17477817_17477824_- 0.630790218 0.630790218 0.630790218 0 CG13733 FBtr0075225 17477793 17477948 3L - 17477810 17477841 3'utr CG13733 FlyBase G37602.1 ACATACATATATAGATCTCTTATGAACAGTAA 30 17477822 0.702536344 4 30 224 1 1.633468456 0 0.266666667 0.488372093 30 0 0 43 3L:17477810-17477841 8 CG13733 FBtr0075225 17477793 17477948 TCTTATGA 8mer-A1 dme-miR-970-3p 3L - 17477811 17477841 3'utr CG13733 FlyBase G28400.1 ACATACATATATAGATCTCTTATGAACAGTA 23 17477821 0.71618281 5 23 174 1 1.544068044 0 0.391304348 0.6 23 0 0 35 3L:17477811-17477841 8 26.5 2652 FBgn0036729 1.666666667 0.2 0.32 15.9 132.5 82.8125 -2 -3 -2.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3L 17511180 17511185 + 3L_17511180_17511185_+ 1 1 1 0 Oatp74D FBtr0075173|FBtr0345117|FBtr0345118|FBtr0302041 17511094|17511094|17511094|17511094 17511693|17511693|17511693|17511693 3L + 17511094 17511259 stop_codon Oatp74D FlyBase G31134.1 AGGAGGAGCGGGTCGGCGACGAGCCTTGCACAAGCTGCAGGATTTCCAATAAACGTTTACCTTAATTGTTAATTAGTTATCATTTGTCTAGTTTGTTAGCCTAGTGCAAGAGTTATGTATTTAGTTAAGTGGCATCTTCGAGCGTCGGGAGACCTCATTCAAATCC 43 17511187 0.909561965 16 38 309 0.901960784 1.662757832 0.254901961 0.162790698 0.294117647 43 5 0 46 3L:17511094-17511259 6 Oatp74D FBtr0302041|FBtr0345118|FBtr0345117|FBtr0075173 17511094|17511094|17511094|17511094 17511693|17511693|17511693|17511693 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 17511095 17511200 3'utr Oatp74D FlyBase G23550.1 GGAGGAGCGGGTCGGCGACGAGCCTTGCACAAGCTGCAGGATTTCCAATAAACGTTTACCTTAATTGTTAATTAGTTATCATTTGTCTAGTTTGTTAGCCTAGTGC 16 17511150 0.886719451 8 15 104 0.884615385 0.759667845 0.230769231 0.4375 0.653846154 16 0 3 23 3L:17511095-17511200 6 5.5 2653 FBgn0036732 1106.486667 32.79 50.10666667 0.004970688 0.167734065 0.109765833 -7 30 11.5 0.01 dme-miR-986-5p 6mer2-7 TTCGAG 3L 17511230 17511235 + 3L_17511230_17511235_+ 1 1 1 0 Oatp74D FBtr0075173|FBtr0345117|FBtr0345118|FBtr0302041 17511094|17511094|17511094|17511094 17511693|17511693|17511693|17511693 3L + 17511094 17511259 stop_codon Oatp74D FlyBase G31134.1 AGGAGGAGCGGGTCGGCGACGAGCCTTGCACAAGCTGCAGGATTTCCAATAAACGTTTACCTTAATTGTTAATTAGTTATCATTTGTCTAGTTTGTTAGCCTAGTGCAAGAGTTATGTATTTAGTTAAGTGGCATCTTCGAGCGTCGGGAGACCTCATTCAAATCC 43 17511251 0.909561965 16 38 309 0.901960784 1.662757832 0.254901961 0.162790698 0.294117647 43 5 0 46 3L:17511094-17511259 6 Oatp74D FBtr0302041|FBtr0345118|FBtr0345117|FBtr0075173 17511094|17511094|17511094|17511094 17511693|17511693|17511693|17511693 TTCGAG 6mer2-7 dme-miR-986-5p 3L + 17511208 17511254 3'utr Oatp74D FlyBase G23551.1 ATGTATTTAGTTAAGTGGCATCTTCGAGCGTCGGGAGACCTCATTCA 12 17511238 0.738013071 7 11 68 0.95 1.278753601 0.35 0.416666667 0.65 12 1 0 19 3L:17511208-17511254 6 14.5 2654 FBgn0036732 1106.486667 32.79 50.10666667 0.013104541 0.44220799 0.28938265 -21 -8 -14.5 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA 3L 17511461 17511466 + 3L_17511461_17511466_+ 1 1 1 0 Oatp74D FBtr0075173|FBtr0345117|FBtr0345118|FBtr0302041 17511094|17511094|17511094|17511094 17511693|17511693|17511693|17511693 3L + 17511439 17511476 3'utr Oatp74D FlyBase G31136.1 TACTACAAACTGATCGACAATTGTGCAAAGTGCAAGAA 16 17511459 0.749004196 3 16 72 1 1.322219295 0.333333333 0.3125 0.476190476 16 0 0 21 3L:17511439-17511476 6 Oatp74D FBtr0302041|FBtr0345118|FBtr0345117|FBtr0075173 17511094|17511094|17511094|17511094 17511693|17511693|17511693|17511693 GTGCAA 6mer3-8 dme-miR-92b-3p 3L + 17511439 17511471 3'utr Oatp74D FlyBase G23553.1 TACTACAAACTGATCGACAATTGTGCAAAGTGC 16 17511459 0.729533522 2 14 79 0.884615385 1.06069784 0.807692308 0.4375 0.653846154 16 2 1 23 3L:17511439-17511471 6 15 2655 FBgn0036732 1106.486667 32.79 50.10666667 0.013556422 0.457456542 0.299361362 2 2 2 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 3L 17511597 17511602 + 3L_17511597_17511602_+ 1 1 1 0 Oatp74D FBtr0075173|FBtr0345117|FBtr0345118|FBtr0302041 17511094|17511094|17511094|17511094 17511693|17511693|17511693|17511693 3L + 17511544 17511653 3'utr Oatp74D FlyBase G31137.1 ATATATTAGACATACACTTACATGTATGTATGTAATTGCAACCTATCTGTGGTAGTTAAATTTTAGTTAAAATTCAAATTAATTGTCTAAGTTTGTCATACAACAAATAT 362 17511589 0.791538694 23 318 3412 0.879271071 1.984527313 0.034168565 0.171270718 0.316628702 362 50 3 386 3L:17511544-17511653 6 Oatp74D FBtr0302041|FBtr0345118|FBtr0345117|FBtr0075173 17511094|17511094|17511094|17511094 17511693|17511693|17511693|17511693 AGTTAA 6mer3-8 dme-miR-999-3p 3L + 17511515 17511615 3'utr Oatp74D FlyBase G23554.1 TATATCGCGATGTATGTAATCTATAATTAATATATTAGACATACACTTACATGTATGTATGTAATTGCAACCTATCTGTGGTAGTTAAATTTTAGTTAAAA 221 17511589 0.872058546 18 190 2032 0.853293413 2.45484486 0.035928144 0.380090498 0.589820359 221 49 0 285 3L:17511515-17511615 6 276 2656 FBgn0036732 1106.486667 32.79 50.10666667 0.249438162 8.417200366 5.508249069 8 8 8 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA 3L 17525937 17525942 - 3L_17525937_17525942_- 1 1 1 0 Edc3 FBtr0075208 17525331 17526958 3L - 17525921 17526032 3'utr Edc3 FlyBase G37610.1 CATCGAATACTAAAAAGAAACCACAACACAATACTTATAATATAAACTGTAGAGCGATTAATTTTATATAAGATTAAATCCAATCTAATAGTGCAAAATTTTAGAAGGTTGC 32 17525944 0.982202803 5 31 222 0.948717949 1.568201724 0 0.1875 0.333333333 32 2 0 37 3L:17525921-17526032 6 Edc3 FBtr0075208 17525331 17526958 GTGCAA 6mer3-8 dme-miR-92b-3p 3L - 17525919 17525985 3'utr Edc3 FlyBase G28407.1 TGTAGAGCGATTAATTTTATATAAGATTAAATCCAATCTAATAGTGCAAAATTTTAGAAGGTTGCGA 20 17525944 0.980601489 3 19 141 1 1.462397998 0 0.3 0.517241379 20 0 0 29 3L:17525919-17525985 6 21.5 2657 FBgn0036735 1377.103333 41.10333333 63.21333333 0.015612481 0.523071933 0.340118119 2 2 2 0.01 dme-miR-7-5p 6mer3-8 GTCTTC 3L 17526409 17526414 - 3L_17526409_17526414_- 1 1 1 0 Edc3 FBtr0075208 17525331 17526958 3L - 17526393 17526442 3'utr Edc3 FlyBase G37613.1 TTACAATTCACTGTCCTTCCTGCAAGTGGTCTTCATAATCGTAAACAACA 16 17526416 0.85685172 3 16 136 1 1.204119983 0 0 0 16 0 0 16 3L:17526393-17526442 6 Edc3 FBtr0075208 17525331 17526958 GTCTTC 6mer3-8 dme-miR-7-5p 3L - 17526390 17526445 3'utr Edc3 FlyBase G28410.1 AATTTACAATTCACTGTCCTTCCTGCAAGTGGTCTTCATAATCGTAAACAACAAAT 15 17526416 0.905317979 5 12 121 0.769230769 1.301029996 0.076923077 0.466666667 0.692307692 15 6 0 20 3L:17526390-17526445 6 13 2658 FBgn0036735 1377.103333 41.10333333 63.21333333 0.009440105 0.316276052 0.205652816 2 2 2 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 17526799 17526804 - 3L_17526799_17526804_- 1 1 1 0 Edc3 FBtr0075208|FBtr0075208|FBtr0075208 17525331|17525331|17525331 17526958|17526958|17526958 3L - 17526739 17526857 3'utr Edc3 FlyBase G37616.1 AACAATAACAATGACACACCCGCACACTTGTGATGATCATCAAGTCCAGTTTCCTGTGAATCTAGCTCTTAGTACTCTTCTCTCATATATTACTCAAGTTAAACATTTTGTTCTACGGC 151 17526829 0.986511311 23 133 1144 0.876344086 1.257945095 0.080645161 0.17218543 0.327956989 151 15 8 163 3L:17526739-17526857 6 Edc3 FBtr0075208|FBtr0075208|FBtr0075208 17525331|17525331|17525331 17526958|17526958|17526958 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 17526764 17526847 3'utr Edc3 FlyBase G28414.1 ATGACACACCCGCACACTTGTGATGATCATCAAGTCCAGTTTCCTGTGAATCTAGCTCTTAGTACTCTTCTCTCATATATTACT 110 17526808 0.796905252 19 99 883 0.911949686 1.207125493 0.100628931 0.345454545 0.547169811 110 6 8 145 3L:17526764-17526847 6 58 2659 FBgn0036735 1377.103333 41.10333333 63.21333333 0.042117391 1.411077771 0.917527948 25 4 14.5 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA 3L 17526822 17526827 - 3L_17526822_17526827_- 0.99999385 0.957095486 0.978544668 0.03033375 Edc3 FBtr0075208 17525331 17526958 3L - 17526739 17526857 3'utr Edc3 FlyBase G37616.1 AACAATAACAATGACACACCCGCACACTTGTGATGATCATCAAGTCCAGTTTCCTGTGAATCTAGCTCTTAGTACTCTTCTCTCATATATTACTCAAGTTAAACATTTTGTTCTACGGC 151 17526829 0.986511311 23 133 1144 0.876344086 1.257945095 0.080645161 0.17218543 0.327956989 151 15 8 163 3L:17526739-17526857 6 Edc3 FBtr0075208 17525331 17526958 TGATGA 6mer3-8 dme-miR-2a-2-5p 3L - 17526764 17526847 3'utr Edc3 FlyBase G28414.1 ATGACACACCCGCACACTTGTGATGATCATCAAGTCCAGTTTCCTGTGAATCTAGCTCTTAGTACTCTTCTCTCATATATTACT 110 17526808 0.796905252 19 99 883 0.911949686 1.207125493 0.100628931 0.345454545 0.547169811 110 6 8 145 3L:17526764-17526847 6 51.5 2660 FBgn0036735 1377.103333 41.10333333 63.21333333 0.037397339 1.252939745 0.81470154 2 -19 -8.5 0.01 dme-miR-252-5p 7mer-m8 GTACTTA 3L 17545826 17545832 + 3L_17545826_17545832_+ 0.588299917 0.588299917 0.588299917 0 Nedd4 FBtr0300520|FBtr0299642|FBtr0331843|FBtr0299647|FBtr0299645|FBtr0299648|FBtr0300519|FBtr0331844|FBtr0299646 17545609|17545609|17545609|17545609|17545609|17545609|17545609|17545609|17545609 17546376|17546376|17546376|17546376|17546376|17546376|17546660|17546376|17546376 3L + 17545812 17545897 3'utr Nedd4 FlyBase G31149.1 CGCCAGCAGATCGTGTACTTATTTGTTCGTTTGCTTTTGTATTATAATCATTTTTGCTAGTTTAGTGTTATTTCGTATGTATTTTA 23 17545825 0.991552874 9 19 214 0.892857143 0.920818754 0.142857143 0.173913043 0.321428571 23 1 2 25 3L:17545812-17545897 7 Nedd4 FBtr0299646|FBtr0331844|FBtr0300519|FBtr0299648|FBtr0299645|FBtr0299647|FBtr0331843|FBtr0299642|FBtr0300520 17545609|17545609|17545609|17545609|17545609|17545609|17545609|17545609|17545609 17546376|17546376|17546660|17546376|17546376|17546376|17546376|17546376|17546376 GTACTTA 7mer-m8 dme-miR-252-5p 3L + 17545811 17545847 3'utr Nedd4 FlyBase G23564.2 CCGCCAGCAGATCGTGTACTTATTTGTTCGTTTGCTT 21 17545833 0.648828154 6 17 172 0.787878788 0.716003344 0.121212121 0.333333333 0.575757576 21 3 4 26 3L:17545811-17545847 7 17.5 2661 FBgn0259174 1914.91 63.1 97.11 0.009138811 0.277337559 0.180208012 1 -7 -3 0.01 dme-miR-986-5p 7mer-m8 ATTCGAG 3L 17551585 17551591 - 3L_17551585_17551591_- 0.671795162 0.671796703 0.671795932 1.06E-06 CycT FBtr0333125|FBtr0333124 17551002|17551002 17552803|17552803 3L - 17551562 17551626 3'utr CycT FlyBase G37629.1 AGTTAGGCATATAGAAATCTAGGCATGATCTATATATTCGAGGCGAAAATGAGAATGAAATGAAA 33 17551577 0.992439641 7 31 154 0.942857143 1.217483944 0.2 0.060606061 0.114285714 33 1 1 33 3L:17551562-17551626 7 CycT FBtr0333125|FBtr0333124 17551002|17551002 17552803|17552803 ATTCGAG 7mer-m8 dme-miR-986-5p 3L - 17551563 17551617 3'utr CycT FlyBase G28425.1 TATAGAAATCTAGGCATGATCTATATATTCGAGGCGAAAATGAGAATGAAATGAA 21 17551577 0.991242216 6 21 103 1 1.477121255 0.3 0.285714286 0.5 21 0 0 30 3L:17551563-17551617 7 22.5 2662 FBgn0025455 628.69 14.30666667 21.88666667 0.035788703 1.572693383 1.02802315 -14 -14 -14 0.01 dme-miR-79-3p 7mer-m8 TAGCTTT 3L 17551897 17551903 - 3L_17551897_17551903_- 0.620204031 0.620204031 0.620204031 0 CycT FBtr0333125|FBtr0333124 17551002|17551002 17552803|17552803 3L - 17551882 17551923 3'utr CycT FlyBase G37630.1 GATCGCCTGGAACGTTGACGTAGCTTTCATTTGTTTTAATTT 13 17551903 0.782869023 7 12 113 0.923076923 1.079181246 0.461538462 0 0 13 1 0 12 3L:17551882-17551923 7 CycT FBtr0333125|FBtr0333124 17551002|17551002 17552803|17552803 TAGCTTT 7mer-m8 dme-miR-79-3p 3L - 17551882 17551933 3'utr CycT FlyBase G28426.1 TATGTTTCAAGATCGCCTGGAACGTTGACGTAGCTTTCATTTGTTTTAATTT 13 17551893 0.975113041 6 13 113 1 1.322219295 0.333333333 0.461538462 0.666666667 13 0 0 21 3L:17551882-17551933 7 11.5 2663 FBgn0025455 628.69 14.30666667 21.88666667 0.018292004 0.803821062 0.525434054 0 -10 -5 0.01 dme-miR-305-5p 6mer3-8 AGTACA 3L 17552323 17552328 - 3L_17552323_17552328_- 1 1 1 0 CycT FBtr0333125|FBtr0333124 17551002|17551002 17552803|17552803 3L - 17552301 17552343 3'utr CycT FlyBase G37633.1 AATCAAGAGATATATAGTACAGACTTCCGCTTAGCAAATATAC 21 17552329 0.810129816 5 18 121 0.8 0.823908741 0.12 0.19047619 0.32 21 3 2 20 3L:17552301-17552343 6 CycT FBtr0333125|FBtr0333124 17551002|17551002 17552803|17552803 AGTACA 6mer3-8 dme-miR-305-5p 3L - 17552311 17552343 3'utr CycT FlyBase G28430.1 AATCAAGAGATATATAGTACAGACTTCCGCTTA 8 17552329 0.785416965 3 7 41 0.909090909 1 0 0.25 0.454545455 8 1 0 10 3L:17552311-17552343 6 14 2664 FBgn0025455 628.69 14.30666667 21.88666667 0.022268527 0.978564772 0.639658849 1 1 1 0.01 dme-miR-92b-3p 7mer-m8 GTGCAAT 3L 17560428 17560434 - 3L_17560428_17560434_- 0.659000077 0.659000077 0.659000077 0 Eip74EF FBtr0075203|FBtr0075204|FBtr0100411|FBtr0075202|FBtr0305796 17560156|17560156|17558670|17560156|17560156 17561769|17561769|17561769|17561769|17561769 3L - 17560408 17560458 3'utr Eip74EF FlyBase G37660.1 CAATTTCCAAACACTGCCCAAAACGTGCAATCTCTTGAAAGGATACCTTGA 11 17560433 0.887387584 5 10 53 0.916666667 1.041392685 0.083333333 0.090909091 0.166666667 11 1 0 11 3L:17560408-17560458 7 Eip74EF FBtr0075203|FBtr0305796|FBtr0075202|FBtr0100411|FBtr0075204 17560156|17560156|17560156|17558670|17560156 17561769|17561769|17561769|17561769|17561769 GTGCAAT 7mer-m8 dme-miR-92b-3p 3L - 17560401 17560444 3'utr Eip74EF FlyBase G28448.1 TGCCCAAAACGTGCAATCTCTTGAAAGGATACCTTGAATAGGAA 6 17560433 0.96192971 3 6 34 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 3L:17560401-17560444 7 7 2665 FBgn0000567 175.3133333 4.123333333 6.33 0.039928509 1.697655618 1.105845182 -1 -1 -1 0.01 dme-miR-92b-3p 7mer-A1 TGCAATA 3L 17560477 17560483 - 3L_17560477_17560483_- 0.43575898 0.782908926 0.609333953 0.245472048 Eip74EF FBtr0075203|FBtr0075204|FBtr0100411|FBtr0075202|FBtr0305796 17560156|17560156|17558670|17560156|17560156 17561769|17561769|17561769|17561769|17561769 3L - 17560467 17560498 3'utr Eip74EF FlyBase G37661.1 AACCGCAATCCTCAATGCAATATACCGACAAC 5 17560478 0.794724932 2 3 14 0.714285714 0.698970004 0 0.4 0.571428571 5 2 0 5 3L:17560467-17560498 7 Eip74EF FBtr0075203|FBtr0305796|FBtr0075202|FBtr0100411|FBtr0075204 17560156|17560156|17560156|17558670|17560156 17561769|17561769|17561769|17561769|17561769 TGCAATA 7mer-A1 dme-miR-92b-3p 3L - 17560465 17560502 3'utr Eip74EF FlyBase G28449.1 CTGCAACCGCAATCCTCAATGCAATATACCGACAACTT 7 17560484 0.968354673 3 4 27 0.8 0.602059991 0.1 0.285714286 0.5 7 1 1 8 3L:17560465-17560502 7 4.5 2666 FBgn0000567 175.3133333 4.123333333 6.33 0.025668327 1.09135004 0.710900474 -5 1 -2 0.01 dme-bantam-3p 6mer3-8 TGATCT 3L 17561167 17561172 - 3L_17561167_17561172_- 1 1 1 0 Eip74EF FBtr0075203|FBtr0075204|FBtr0100411|FBtr0075202|FBtr0305796 17560156|17560156|17558670|17560156|17560156 17561769|17561769|17561769|17561769|17561769 3L - 17561154 17561193 3'utr Eip74EF FlyBase G37664.1 CAAGAATTTCTCTATCTCTATTGATCTAATGCTAAATCTA 17 17561173 0.699280383 5 16 160 0.954545455 1.322219295 0.136363636 0.235294118 0.409090909 17 1 0 21 3L:17561154-17561193 6 Eip74EF FBtr0075203|FBtr0305796|FBtr0075202|FBtr0100411|FBtr0075204 17560156|17560156|17560156|17558670|17560156 17561769|17561769|17561769|17561769|17561769 TGATCT 6mer3-8 dme-bantam-3p 3L - 17561157 17561192 3'utr Eip74EF FlyBase G28451.1 AAGAATTTCTCTATCTCTATTGATCTAATGCTAAAT 7 17561173 0.721636197 4 7 74 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3L:17561157-17561192 6 12 2667 FBgn0000567 175.3133333 4.123333333 6.33 0.068448872 2.910266774 1.895734597 1 1 1 0.01 dme-miR-283-5p 7mer-m8 TGATATT 3L 17561240 17561246 - 3L_17561240_17561246_- 0.620038208 0.620203677 0.620120943 0.000117026 Eip74EF FBtr0075203|FBtr0075204|FBtr0100411|FBtr0075202|FBtr0305796 17560156|17560156|17558670|17560156|17560156 17561769|17561769|17561769|17561769|17561769 3L - 17561205 17561278 3'utr Eip74EF FlyBase G37665.1 AGAGGACGAAGGACGACCGAATTGATTCATATTGATATTCGATAGATGTGTGTAATATGTAAATGAGTACGAAC 12 17561257 0.983680556 5 9 68 0.714285714 1 0.285714286 0.083333333 0.214285714 12 4 0 10 3L:17561205-17561278 7 Eip74EF FBtr0075203|FBtr0305796|FBtr0075202|FBtr0100411|FBtr0075204 17560156|17560156|17560156|17558670|17560156 17561769|17561769|17561769|17561769|17561769 TGATATT 7mer-m8 dme-miR-283-5p 3L - 17561225 17561271 3'utr Eip74EF FlyBase G28452.1 GAAGGACGACCGAATTGATTCATATTGATATTCGATAGATGTGTGTA 7 17561247 0.985221532 4 7 58 1 1.041392685 0.363636364 0.428571429 0.636363636 7 0 0 11 3L:17561225-17561271 7 6.5 2668 FBgn0000567 175.3133333 4.123333333 6.33 0.037076473 1.576394503 1.02685624 11 1 6 0.01 dme-bantam-3p 6mer3-8 TGATCT 3L 17561432 17561437 - 3L_17561432_17561437_- 1 1 1 0 Eip74EF FBtr0075203|FBtr0075204|FBtr0100411|FBtr0075202|FBtr0305796 17560156|17560156|17558670|17560156|17560156 17561769|17561769|17561769|17561769|17561769 3L - 17561347 17561491 3'utr Eip74EF FlyBase G37666.1 ACACCCTGTGTCCTGTACCCTATACATACACCCAGCTAAATCGACGGTAAATAATGATCTATTCATGGGCGTTAGTGTTGTACTTGTAACTGTAGATTTAACTGTAAACTGTAACTGTAATGAATATTGTTATTATTGGTTATTA 87 17561437 0.986486788 14 81 695 0.919191919 1.959041392 0.070707071 0.137931034 0.242424242 87 8 0 91 3L:17561347-17561491 6 Eip74EF FBtr0075203|FBtr0305796|FBtr0075202|FBtr0100411|FBtr0075204 17560156|17560156|17560156|17558670|17560156 17561769|17561769|17561769|17561769|17561769 TGATCT 6mer3-8 dme-bantam-3p 3L - 17561377 17561491 3'utr Eip74EF FlyBase G28453.1 ACACCCTGTGTCCTGTACCCTATACATACACCCAGCTAAATCGACGGTAAATAATGATCTATTCATGGGCGTTAGTGTTGTACTTGTAACTGTAGATTTAACTGTAAACTGTAAC 47 17561437 0.770845622 14 46 360 0.955882353 1.812913357 0.191176471 0.340425532 0.544117647 47 3 0 65 3L:17561377-17561491 6 45.5 2669 FBgn0000567 175.3133333 4.123333333 6.33 0.259535308 11.03476152 7.187993681 0 0 0 0.01 dme-miR-1008-3p 8mer-A1 AGCTGTGA 3L 1759130 1759137 + 3L_1759130_1759137_+ 0.643562749 0.643562748 0.643562749 0 CG8001 FBtr0334073|FBtr0300292|FBtr0334074|FBtr0072774 1759035|1759035|1759035|1759035 1759208|1759208|1759208|1759208 3L + 1759111 1759156 3'utr CG8001 FlyBase G27208.1 TGTTAGAAAGCGTTTCTGAAGCTGTGAATTTGTAACCGTAACACAT 72 1759126 0.678658016 8 68 594 0.952941176 1.607455023 0.235294118 0.138888889 0.270588235 72 3 1 81 3L:1759111-1759156 8 CG8001 FBtr0334074|FBtr0072774|FBtr0334073|FBtr0300292 1759035|1759035|1759035|1759035 1759208|1759208|1759208|1759208 AGCTGTGA 8mer-A1 dme-miR-1008-3p 3L + 1759106 1759156 3'utr CG8001 FlyBase G20596.1 AACTATGTTAGAAAGCGTTTCTGAAGCTGTGAATTTGTAACCGTAACACAT 55 1759127 0.71612987 8 52 453 0.941176471 1.425968732 0.458823529 0.454545455 0.647058824 55 3 2 80 3L:1759106-1759156 8 63 2670 FBgn0035268 473.3333333 22.80666667 34.95333333 0.133098592 2.76235019 1.802403204 4 3 3.5 0.01 dme-miR-308-3p 8mer-m1 CTGTGATT 3L 17630070 17630077 + 3L_17630070_17630077_+ 0.385556977 0.385557078 0.385557027 7.07E-08 CG7510 FBtr0333121|FBtr0075182 17629985|17629985 17630971|17630480 3L + 17630028 17630124 3'utr CG7510 FlyBase G31157.1 CTTGATTTCCTGTTTAGTTTATTTTGAATGTAATTTTGACTGCTGTGATTGTACGCCAAACAAGAACGCACACACAATGCAGTCAGTTGTGTGTGGG 151 17630077 0.756423141 12 144 1193 0.954545455 2.225309282 0.068181818 0.125827815 0.25 151 8 0 168 3L:17630028-17630124 8 CG7510 FBtr0333121|FBtr0075182 17629985|17629985 17630971|17630480 CTGTGATT 8mer-m1 dme-miR-308-3p 3L + 17630046 17630124 3'utr CG7510 FlyBase G23571.1 TTATTTTGAATGTAATTTTGACTGCTGTGATTGTACGCCAAACAAGAACGCACACACAATGCAGTCAGTTGTGTGTGGG 111 17630077 0.79662595 11 104 864 0.977142857 2.23299611 0.165714286 0.405405405 0.622857143 111 4 0 171 3L:17630046-17630124 8 120 2671 FBgn0036741 369.9166667 11.27333333 17.24666667 0.324397387 10.644589 6.957866254 -7 -7 -7 0.01 dme-miR-92b-3p 8mer-A1 GTGCAATA 3L 17630264 17630271 + 3L_17630264_17630271_+ 0.628916032 0.628916032 0.628916032 0 CG7510 FBtr0333121|FBtr0075182 17629985|17629985 17630971|17630480 3L + 17630251 17630289 3'utr CG7510 FlyBase G31159.1 AGAGCTTTATGCAGTGCAATATAGAATACTGAATGTAAC 6 17630260 0.969192641 2 6 33 1 0.954242509 0.333333333 0.333333333 0.555555556 6 0 0 9 3L:17630251-17630289 8 CG7510 FBtr0333121|FBtr0075182 17629985|17629985 17630971|17630480 GTGCAATA 8mer-A1 dme-miR-92b-3p 3L + 17630246 17630290 3'utr CG7510 FlyBase G23573.1 CAGCTAGAGCTTTATGCAGTGCAATATAGAATACTGAATGTAACA 6 17630259 0.862561536 5 6 34 1 0.84509804 0.428571429 0.166666667 0.285714286 6 0 0 7 3L:17630246-17630290 8 5 2672 FBgn0036741 369.9166667 11.27333333 17.24666667 0.013516558 0.443524542 0.289911094 4 5 4.5 0.01 dme-miR-7-5p 6mer2-7 TCTTCC 3L 17638389 17638394 - 3L_17638389_17638394_- 1 1 1 0 Pep FBtr0075200|FBtr0304977|FBtr0075198|FBtr0075199 17638101|17638101|17638116|17638101 17638504|17638504|17640026|17638504 3L - 17638306 17638516 stop_codon Pep FlyBase G37675.1 AATCGCTACTAAGTAGACGTCGAAGGAATTCGTAATTTAACATAACATAAACCTTAATATACAAGAAAAAATTTACATTCACGCCCAGGAGGAGGATGAAGAAAGAACAGATCAAATCGATCTCTTCCCGCAATTTGACATTTGCATCCCAATTTGCATATACACTGAATGAATGGAAACTGAGAAGAAGACGGTCAACTTTTAGTTGAAA 350 17638392 0.799441887 34 344 1763 0.98630137 2.635483747 0.205479452 0.202857143 0.363013699 350 6 0 432 3L:17638306-17638516 6 Pep FBtr0075198 17638116 17640026 TCTTCC 6mer2-7 dme-miR-7-5p 3L - 17638262 17638450 3'utr Pep FlyBase G28460.1 AAAAATTTACATTCACGCCCAGGAGGAGGATGAAGAAAGAACAGATCAAATCGATCTCTTCCCGCAATTTGACATTTGCATCCCAATTTGCATATACACTGAATGAATGGAAACTGAGAAGAAGACGGTCAACTTTTAGTTGAAACAGTTGAATATATTGTACGACGAAGCTTCTTGAAACTGACGAGG 238 17638392 0.999991375 18 234 1184 0.980337079 2.542825427 0.18258427 0.340336134 0.558988764 238 7 0 349 3L:17638262-17638450 6 237 2673 FBgn0004401 3496.79 156.06 239.5966667 0.067776446 1.518646674 0.989162342 -2 -2 -2 0.01 dme-miR-184-5p 6mer3-8 TGATAA 3L 17638884 17638889 - 3L_17638884_17638889_- 1 1 1 0 Pep FBtr0075198 17638116 17640026 3L - 17638861 17638958 3'utr Pep FlyBase G37679.1 AGGCGCTGAGGGTGAGCTGTACGATCCATCGGAAGCCACTGGCGATGACGAGGACGTGGAGATGGTGGATGATAATGCTGAGGGCGAGGGCGAAGGCG 19 17638884 0.930344867 6 18 68 0.954545455 1.322219295 0.409090909 0.157894737 0.272727273 19 1 0 21 3L:17638861-17638958 6 Pep FBtr0075198 17638116 17640026 TGATAA 6mer3-8 dme-miR-184-5p 3L - 17638865 17638925 3'utr Pep FlyBase G28463.1 AGCCACTGGCGATGACGAGGACGTGGAGATGGTGGATGATAATGCTGAGGGCGAGGGCGAA 8 17638883 0.881912087 6 8 22 1 1 0.1 0.25 0.4 8 0 0 10 3L:17638865-17638925 6 8 2674 FBgn0004401 3496.79 156.06 239.5966667 0.002287813 0.051262335 0.033389446 -5 -6 -5.5 0.01 dme-miR-980-3p 6mer3-8 GGCAGC 3L 17639230 17639235 - 3L_17639230_17639235_- 1 0.999288653 0.999644327 0.000502965 Pep FBtr0075198 17638116 17640026 3L - 17639025 17639256 3'utr Pep FlyBase G37680.1 CCCGCCTACCTAAGTACAACTGGCAGCGTGCTGTCGGTCCCGGTCTGATCTCCAAGCTGGAGTGCTATGAGTGCTCGGTGTGCAGCAAGTTCTTCGACACCGAGGTGACCGCCGAGATTCACTCCCGTACGGCGACTCATCACCGCAACTTCTTGAAGTTTATCAACGAGAAATCAAGCGATACCAAGATCGCACAGAAGCGCGCAGCTGCCGCCCTGGAGGAGAATGAGCG 89 17639211 0.973825908 22 76 470 0.884615385 1.264817823 0.201923077 0.146067416 0.269230769 89 8 4 92 3L:17639025-17639256 6 Pep FBtr0075198 17638116 17640026 GGCAGC 6mer3-8 dme-miR-980-3p 3L - 17639168 17639258 3'utr Pep FlyBase G28467.1 TACCCGCCTACCTAAGTACAACTGGCAGCGTGCTGTCGGTCCCGGTCTGATCTCCAAGCTGGAGTGCTATGAGTGCTCGGTGTGCAGCAAG 19 17639212 0.889050501 8 17 109 0.935483871 1.462397998 0.225806452 0.421052632 0.64516129 19 2 0 29 3L:17639168-17639258 6 19.5 2675 FBgn0004401 3496.79 156.06 239.5966667 0.005576543 0.124951942 0.081386775 -24 -23 -23.5 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 3L 17639293 17639298 - 3L_17639293_17639298_- 1 1 1 0 Pep FBtr0075198 17638116 17640026 3L - 17639268 17639399 3'utr Pep FlyBase G37681.1 GGGTGAGGAAGCTGCTGACGAGACAAAGGAGGGCGATGAGCTAAACGAGAGCCAAGAGGAAGAGGAAGTGGCACTGCCCGTGGACCCCGAGGACTGCATCCTTGACTTCAACGACGGCGATGAGATCCCCAG 32 17639298 0.895687552 10 32 71 1 1.612783857 0.43902439 0.28125 0.43902439 32 0 0 41 3L:17639268-17639399 6 Pep FBtr0075198 17638116 17640026 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 17639260 17639334 3'utr Pep FlyBase G28468.1 AAGTGGCACTGCCCGTGGACCCCGAGGACTGCATCCTTGACTTCAACGACGGCGATGAGATCCCCAGCGAGGTGG 12 17639319 0.923067419 6 12 40 1 1.278753601 0.052631579 0.416666667 0.631578947 12 0 0 19 3L:17639260-17639334 6 6 2676 FBgn0004401 3496.79 156.06 239.5966667 0.001715859 0.038446751 0.025042085 0 21 10.5 0.01 dme-miR-34-5p 7mer-m8 CACTGCC 3L 17639322 17639328 - 3L_17639322_17639328_- 0.708953382 0.708953382 0.708953382 0 Pep FBtr0075198 17638116 17640026 3L - 17639268 17639399 3'utr Pep FlyBase G37681.1 GGGTGAGGAAGCTGCTGACGAGACAAAGGAGGGCGATGAGCTAAACGAGAGCCAAGAGGAAGAGGAAGTGGCACTGCCCGTGGACCCCGAGGACTGCATCCTTGACTTCAACGACGGCGATGAGATCCCCAG 32 17639331 0.895687552 10 32 71 1 1.612783857 0.43902439 0.28125 0.43902439 32 0 0 41 3L:17639268-17639399 7 Pep FBtr0075198 17638116 17640026 CACTGCC 7mer-m8 dme-miR-34-5p 3L - 17639260 17639334 3'utr Pep FlyBase G28468.1 AAGTGGCACTGCCCGTGGACCCCGAGGACTGCATCCTTGACTTCAACGACGGCGATGAGATCCCCAGCGAGGTGG 12 17639319 0.923067419 6 12 40 1 1.278753601 0.052631579 0.416666667 0.631578947 12 0 0 19 3L:17639260-17639334 7 8.5 2677 FBgn0004401 3496.79 156.06 239.5966667 0.002430801 0.054466231 0.035476287 3 -9 -3 0.01 dme-miR-282-5p 7mer-A1 GAGGCTA 3L 17639467 17639473 - 3L_17639467_17639473_- 0.823349562 0.823349562 0.823349562 0 Pep FBtr0075198 17638116 17640026 3L - 17639449 17639500 3'utr Pep FlyBase G37682.2 AAGAAGGAGGGCGAAGCAGCCGATGGCGAGGCTAAGAAGGAGGGTGCCGGCG 41 17639477 0.977169677 2 33 41 0.909090909 1.602059991 0.568181818 0.073170732 0.136363636 41 4 0 40 3L:17639449-17639500 7 Pep FBtr0075198 17638116 17640026 GAGGCTA 7mer-A1 dme-miR-282-5p 3L - 17639419 17639499 3'utr Pep FlyBase G28469.1 AGAAGGAGGGCGAAGCAGCCGATGGCGAGGCTAAGAAGGAGGGTGCCGGCGATGGCGAGGGTGCCGAAGGTGATGAAGCCG 21 17639477 0.952206554 6 19 32 0.947368421 1.255272505 0.526315789 0.619047619 0.789473684 21 1 1 36 3L:17639419-17639499 7 23 2678 FBgn0004401 3496.79 156.06 239.5966667 0.006577461 0.147379213 0.095994658 4 4 4 0.01 dme-miR-1012-3p 7mer-m8 TTGACTA 3L 17639655 17639661 - 3L_17639655_17639661_- 0.586908882 0.587608118 0.5872585 0.000494409 Pep FBtr0075198 17638116 17640026 3L - 17639585 17639902 3'utr Pep FlyBase G37683.1 CGCCTCAAGGCCAACATGATCCGTCAGGAGGCTAAGATCGCAGAGCAGCTCAAGTCGATCGAGTTTGACCGCTTGAAGCGCATGGGCAAAAGCAAGCAGCGTCAGCTGGACTACTGCACCATGTGCGACCTGAACTTCCATGGTCACATCTCGACCCATCGCAAGTCGGAGGGACATTTGCAGCTGAAGAAGTTCTTGCACCCCAAGTGCATTGAGTGCAACAAGGAGTTCGCCACTCGCATTGACTACGATACTCATCTGCTGTCCGCCGAGCATCTGAAGAAGGCTGCCGAGAACAACACCAAGGTGGGTGAGCGC 144 17639645 0.970719689 35 132 758 0.915151515 1.480006943 0.151515152 0.125 0.236363636 144 10 4 151 3L:17639585-17639902 7 Pep FBtr0075198 17638116 17640026 TTGACTA 7mer-m8 dme-miR-1012-3p 3L - 17639585 17639675 3'utr Pep FlyBase G28470.1 GTTCGCCACTCGCATTGACTACGATACTCATCTGCTGTCCGCCGAGCATCTGAAGAAGGCTGCCGAGAACAACACCAAGGTGGGTGAGCGC 29 17639645 0.978988996 7 27 177 0.857142857 0.77815125 0.333333333 0.310344828 0.523809524 29 1 5 36 3L:17639585-17639675 7 37 2679 FBgn0004401 3496.79 156.06 239.5966667 0.010581133 0.237088299 0.154426188 -16 -16 -16 0.01 dme-miR-980-3p 6mer2-7 GCAGCT 3L 17639718 17639723 - 3L_17639718_17639723_- 1 1 1 0 Pep FBtr0075198 17638116 17640026 3L - 17639585 17639902 3'utr Pep FlyBase G37683.1 CGCCTCAAGGCCAACATGATCCGTCAGGAGGCTAAGATCGCAGAGCAGCTCAAGTCGATCGAGTTTGACCGCTTGAAGCGCATGGGCAAAAGCAAGCAGCGTCAGCTGGACTACTGCACCATGTGCGACCTGAACTTCCATGGTCACATCTCGACCCATCGCAAGTCGGAGGGACATTTGCAGCTGAAGAAGTTCTTGCACCCCAAGTGCATTGAGTGCAACAAGGAGTTCGCCACTCGCATTGACTACGATACTCATCTGCTGTCCGCCGAGCATCTGAAGAAGGCTGCCGAGAACAACACCAAGGTGGGTGAGCGC 144 17639725 0.970719689 35 132 758 0.915151515 1.480006943 0.151515152 0.125 0.236363636 144 10 4 151 3L:17639585-17639902 6 Pep FBtr0075198 17638116 17640026 GCAGCT 6mer2-7 dme-miR-980-3p 3L - 17639680 17639809 3'utr Pep FlyBase G28471.1 AAGCAGCGTCAGCTGGACTACTGCACCATGTGCGACCTGAACTTCCATGGTCACATCTCGACCCATCGCAAGTCGGAGGGACATTTGCAGCTGAAGAAGTTCTTGCACCCCAAGTGCATTGAGTGCAACA 27 17639725 0.9583296 12 26 125 0.976744186 1.62324929 0.069767442 0.407407407 0.627906977 27 1 0 42 3L:17639680-17639809 6 23 2680 FBgn0004401 3496.79 156.06 239.5966667 0.006577461 0.147379213 0.095994658 2 2 2 0.01 dme-miR-33-5p 7mer-A1 AATGCAA 3L 17645569 17645575 - 3L_17645569_17645575_- 0.782911824 0.782911824 0.782911824 0 CG43085 FBtr0333122|FBtr0304976 17645484|17645484 17645613|17645613 3L - 17645551 17645591 3'utr CG43085 FlyBase G37696.1 TCAAGGCTCAAATGGGAATGCAAGACACAGCGGACTAATTT 44 17645573 0.997209469 2 43 78 1 1.681241237 0.166666667 0.068181818 0.145833333 44 0 0 48 3L:17645551-17645591 7 CG43085 FBtr0304976|FBtr0333122 17645484|17645484 17645613|17645613 AATGCAA 7mer-A1 dme-miR-33-5p 3L - 17645544 17645596 3'utr CG43085 FlyBase G28483.1 AGGACTCAAGGCTCAAATGGGAATGCAAGACACAGCGGACTAATTTTATTCCA 33 17645573 0.98216591 3 33 74 1 1.755874856 0.087719298 0.454545455 0.684210526 33 0 0 57 3L:17645544-17645596 7 37.5 2681 FBgn0262531 5.666666667 0.7 1.11 6.617647059 53.57142857 33.78378378 -2 -2 -2 0.01 dme-miR-8-3p 6mer2-7 AGTATT 3L 17648265 17648270 - 3L_17648265_17648270_- 1 1 1 0 Ndfip FBtr0075210 17647440 17648440 3L - 17648248 17648295 3'utr Ndfip FlyBase G37700.1 TTCTCGAAATCACTATGGACTTGAAAGTATTCCCTCAAATGTATTAGT 33 17648280 0.775661169 3 33 195 1 1.602059991 0.4 0.151515152 0.3 33 0 0 40 3L:17648248-17648295 6 Ndfip FBtr0075210 17647440 17648440 AGTATT 6mer2-7 dme-miR-8-3p 3L - 17648254 17648301 3'utr Ndfip FlyBase G28484.1 GCAGAGTTCTCGAAATCACTATGGACTTGAAAGTATTCCCTCAAATGT 29 17648280 0.753874219 3 29 146 1 1.633468456 0.465116279 0.344827586 0.558139535 29 0 0 43 3L:17648254-17648301 6 29 2682 FBgn0052177 332.66 19.31666667 29.61 0.087176096 1.501294219 0.979398852 10 10 10 0.01 dme-miR-184-5p 6mer2-7 GATAAG 3L 17660037 17660042 - 3L_17660037_17660042_- 1 1 1 0 Crtc FBtr0345384|FBtr0330162 17659816|17659816 17662225|17661949 3L - 17660009 17660073 3'utr Crtc FlyBase G37709.1 ATGAAAATCTTGAAGAATTATAATAATACTAGATAAGTGAGAGAGAAATGCTAATTATAAATTAT 21 17660023 0.979749516 7 18 122 0.888888889 1.380211242 0.111111111 0.142857143 0.333333333 21 3 0 24 3L:17660009-17660073 6 Crtc FBtr0345384|FBtr0330162 17659816|17659816 17662225|17661949 GATAAG 6mer2-7 dme-miR-184-5p 3L - 17660007 17660046 3'utr Crtc FlyBase G28488.1 ACTAGATAAGTGAGAGAGAAATGCTAATTATAAATTATAC 6 17660024 0.942109691 2 5 31 0.818181818 0.954242509 0.272727273 0.666666667 0.818181818 6 2 0 9 3L:17660007-17660046 6 10.5 2683 FBgn0036746 1464.6 32.19333333 49.71333333 0.007169193 0.326154483 0.211210943 -19 -18 -18.5 0.01 dme-miR-968-5p 7mer-A1 CTACTTA 3L 17660480 17660486 - 3L_17660480_17660486_- 0.823349392 0.823349372 0.823349382 0 Crtc FBtr0345384|FBtr0330162 17659816|17659816 17662225|17661949 3L - 17660481 17660514 3'utr Crtc FlyBase G37711.1 ATACACACACAAATCATTGAGTCTAAATCTACTT 12 17660497 0.958315529 2 12 74 1 1.079181246 0 0 0 12 0 0 12 3L:17660481-17660514 5 Crtc FBtr0345384|FBtr0330162 17659816|17659816 17662225|17661949 CTACTTA 7mer-A1 dme-miR-968-5p 3L - 17660477 17660512 3'utr Crtc FlyBase G28491.1 ACACACACAAATCATTGAGTCTAAATCTACTTAACA 14 17660497 0.830123943 4 12 76 0.823529412 0.84509804 0.058823529 0.142857143 0.294117647 14 2 1 14 3L:17660477-17660512 7 11 2684 FBgn0036746 1464.6 32.19333333 49.71333333 0.007510583 0.341685649 0.221268607 11 11 11 0.01 dme-miR-305-3p 8mer-m1 ATGTGCCG 3L 17661159 17661166 - 3L_17661159_17661166_- 0.628736567 0.628736567 0.628736567 0 Crtc FBtr0345384|FBtr0330162 17659816|17659816 17662225|17661949 3L - 17661134 17661191 3'utr Crtc FlyBase G37712.1 ACACCCAACCCATATTATAATCCCAATGTGCCGTGGAAGCAATTACTAGAGTTTAAGA 29 17661163 0.940467417 5 29 122 1 1.51851394 0 0.137931034 0.242424242 29 0 0 33 3L:17661134-17661191 8 Crtc FBtr0345384|FBtr0330162 17659816|17659816 17662225|17661949 ATGTGCCG 8mer-m1 dme-miR-305-3p 3L - 17661132 17661178 3'utr Crtc FlyBase G28492.1 ATTATAATCCCAATGTGCCGTGGAAGCAATTACTAGAGTTTAAGATG 21 17661163 0.775153561 4 20 94 0.933333333 1.447158031 0.166666667 0.333333333 0.533333333 21 2 0 28 3L:17661132-17661178 8 24 2685 FBgn0036746 1464.6 32.19333333 49.71333333 0.016386727 0.745495962 0.482767869 -3 -3 -3 0.01 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3L 1771981 1771986 - 3L_1771981_1771986_- 1 1 1 0 CG13933 FBtr0332881|FBtr0072792 1771807|1771807 1772601|1772601 3L - 1771957 1772042 3'utr CG13933 FlyBase G33475.1 GTTTCCAGTCCCTCATGCTGCGTAAGTTATAGTAGGACATAAACTTAAGGCTGTTTTTTGACAAACATTTCGGGTGTTTTAGAATT 33 1771997 0.987306031 6 32 274 0.972972973 1.556302501 0.108108108 0.121212121 0.216216216 33 1 0 36 3L:1771957-1772042 6 CG13933 FBtr0072792|FBtr0332881 1771807|1771807 1772601|1772601 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3L - 1771981 1772018 3'utr CG13933 FlyBase G25322.1 AGTTATAGTAGGACATAAACTTAAGGCTGTTTTTTGAC 20 1771997 0.755437791 4 19 165 0.882352941 1.477121255 0.117647059 0.45 0.676470588 20 4 0 30 3L:1771981-1772018 5 22 2686 FBgn0035270 373.6633333 14.21333333 21.71 0.058876529 1.547842402 1.0133579 11 11 11 0.01 dme-miR-965-3p 7mer-m8 TACGCTT 3L 1772300 1772306 - 3L_1772300_1772306_- 0.557926061 0.357989023 0.457957542 0.141376879 CG13933 FBtr0332881|FBtr0072792 1771807|1771807 1772601|1772601 3L - 1772278 1772343 3'utr CG13933 FlyBase G33477.1 AGATCGCTAAATTCTCTTAATTTAGGGCCAAAGGAGATACGCTTGATCTGAAGCTGTTGCGTATGA 51 1772286 0.795702591 9 48 323 0.919354839 1.153814864 0.483870968 0.117647059 0.274193548 51 2 3 57 3L:1772278-1772343 7 CG13933 FBtr0072792|FBtr0332881 1771807|1771807 1772601|1772601 TACGCTT 7mer-m8 dme-miR-965-3p 3L - 1772272 1772344 3'utr CG13933 FlyBase G25324.1 TAGATCGCTAAATTCTCTTAATTTAGGGCCAAAGGAGATACGCTTGATCTGAAGCTGTTGCGTATGAGATATG 27 1772286 0.93916862 8 27 174 1 1.681241237 0.375 0.444444444 0.6875 27 0 0 48 3L:1772272-1772344 7 35 2687 FBgn0035270 373.6633333 14.21333333 21.71 0.093667205 2.462476548 1.612160295 -20 -20 -20 0.01 dme-miR-1006-3p 7mer-A1 GAATTTA 3L 1772397 1772403 - 3L_1772397_1772403_- 0.82334956 0.823349562 0.823349561 0 CG13933 FBtr0332881|FBtr0072792 1771807|1771807 1772601|1772601 3L - 1772367 1772430 3'utr CG13933 FlyBase G33478.1 AGCTTAACGATCAGTTCTGAAATGACTGAATTTACTTTGATATCGAAAGCGAATAGTTATGTAT 18 1772394 0.981100677 7 18 132 1 1.322219295 0.142857143 0.166666667 0.285714286 18 0 0 21 3L:1772367-1772430 7 CG13933 FBtr0072792|FBtr0332881 1771807|1771807 1772601|1772601 GAATTTA 7mer-A1 dme-miR-1006-3p 3L - 1772367 1772430 3'utr CG13933 FlyBase G25325.1 AGCTTAACGATCAGTTCTGAAATGACTGAATTTACTTTGATATCGAAAGCGAATAGTTATGTAT 10 1772410 0.980309726 4 10 72 1 1.146128036 0.142857143 0.4 0.571428571 10 0 0 14 3L:1772367-1772430 7 13 2688 FBgn0035270 373.6633333 14.21333333 21.71 0.034790676 0.914634146 0.598802395 -9 7 -1 0.01 dme-miR-304-5p 7mer-m8 TGAGATT 3L 17752172 17752178 - 3L_17752172_17752178_- 0.620203442 0.620203442 0.620203442 0 Adgf-A FBtr0075191|FBtr0075190 17751729|17751729 17752452|17752452 3L - 17752143 17752238 3'utr Adgf-A FlyBase G37727.1 AGCTAATCGTTATGGACTAGTCCTTAGTTAGATCTAGGCTAATACCTCTCTGTAAACCCATGAGATTCTGTCCCACGCCCCTAAAACTGTTTCAAT 58 17752173 0.76055844 9 57 352 0.984375 1.799340549 0.09375 0.103448276 0.1875 58 1 0 63 3L:17752143-17752238 7 Adgf-A FBtr0075191|FBtr0075190 17751729|17751729 17752452|17752452 TGAGATT 7mer-m8 dme-miR-304-5p 3L - 17752148 17752239 3'utr Adgf-A FlyBase G28502.1 AAGCTAATCGTTATGGACTAGTCCTTAGTTAGATCTAGGCTAATACCTCTCTGTAAACCCATGAGATTCTGTCCCACGCCCCTAAAACTGTT 34 17752173 0.751486609 8 32 204 0.982142857 1.439332694 0.053571429 0.441176471 0.660714286 34 0 1 55 3L:17752148-17752239 7 33.5 2689 FBgn0036752 1210.026667 56.79666667 87.13666667 0.02768534 0.589823346 0.38445354 -5 -5 -5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3L 17752385 17752390 - 3L_17752385_17752390_- 1 1 1 0 Adgf-A FBtr0075191|FBtr0075190 17751729|17751729 17752452|17752452 3L - 17752338 17752411 3'utr Adgf-A FlyBase G37728.1 GATGACCTCCAACCTTTGGCGCTAGTCGGAATACACCCCCCTTCGTCCGCTGCTCCTACCACTCCACTTCAACT 8 17752396 0.9804384 4 7 46 0.888888889 0.602059991 0.111111111 0.125 0.222222222 8 0 1 8 3L:17752338-17752411 6 Adgf-A FBtr0075191|FBtr0075190 17751729|17751729 17752452|17752452 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3L - 17752341 17752409 3'utr Adgf-A FlyBase G28503.1 TGACCTCCAACCTTTGGCGCTAGTCGGAATACACCCCCCTTCGTCCGCTGCTCCTACCACTCCACTTCA 6 17752369 0.950455581 6 6 26 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 3L:17752341-17752409 6 3.5 2690 FBgn0036752 1210.026667 56.79666667 87.13666667 0.002892498 0.061623335 0.040166788 6 -21 -7.5 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 3L 17797846 17797852 - 3L_17797846_17797852_- 0.620204266 0.620204266 0.620204266 0 NUCB1 FBtr0075171 17797736 17798085 3L - 17797762 17797871 3'utr NUCB1 FlyBase G37734.1 TTCGCTTTTCCAGTAGCTCTGCATTTGCGTGATGTATTTCTCTAACGAATTTTGTGTACATATGAGTTTATACCTGAACATCAAAAACAAAATAAATGAAATGAAACGAA 85 17797846 0.989664956 15 81 792 0.949494949 1.496006599 0.212121212 0.152941176 0.272727273 85 3 2 94 3L:17797762-17797871 7 NUCB1 FBtr0075171 17797736 17798085 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 17797825 17797869 3'utr NUCB1 FlyBase G28508.2 CGCTTTTCCAGTAGCTCTGCATTTGCGTGATGTATTTCTCTAACG 58 17797847 0.780720965 6 56 568 0.967391304 1.949390007 0.173913043 0.396551724 0.619565217 58 3 0 89 3L:17797825-17797869 7 58.5 2691 FBgn0052190 2200.613333 121.53 186.3466667 0.026583498 0.481362627 0.313931025 -6 -5 -5.5 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3L 17798005 17798011 - 3L_17798005_17798011_- 0.443131018 0.443131018 0.443131018 0 NUCB1 FBtr0075171 17797736 17798085 3L - 17797955 17798058 3'utr NUCB1 FlyBase G37736.1 GGGGCATGCAAGCAAAGCATTATACACTTCTGGTAACGAGAACACAATGTGATTGGACTGAAATAGCTCACTAAAGTCAATATCTCACTATAGTTATGTAGCAA 598 17798006 0.96477575 15 591 3087 0.987412587 2.24674471 0.4 0.175585284 0.31048951 598 6 3 706 3L:17797955-17798058 7 NUCB1 FBtr0075171 17797736 17798085 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 17797978 17798060 3'utr NUCB1 FlyBase G28510.1 TTGGGGCATGCAAGCAAAGCATTATACACTTCTGGTAACGAGAACACAATGTGATTGGACTGAAATAGCTCACTAAAGTCAAT 447 17798006 0.737596664 9 431 2274 0.970546985 2.539076099 0.403927069 0.422818792 0.638148668 447 20 1 692 3L:17797978-17798060 7 509 2692 FBgn0052190 2200.613333 121.53 186.3466667 0.231299153 4.188266272 2.731468231 -5 -5 -5 0.01 dme-miR-7-5p 6mer2-7 TCTTCC 3L 17843964 17843969 - 3L_17843964_17843969_- 1 1 1 0 MED19 FBtr0075160|FBtr0345815 17843813|17843723 17844253|17844253 3L - 17843909 17844063 3'utr MED19 FlyBase G37748.1 AATTTTTCGTTCGTTTTCGCGCTAGCTTAATGAGATTTATTTAAACGCAAGTTATGGTACAAAACGCAAGAACGTTTTCGCTCTCGATTCCAGCTCTTCCCTCCACACAAACACACCCCTCGCCACGCCGCCACAAAAACGCTGCTTTGCAACCT 101 17843967 0.967422233 9 97 531 0.949152542 2.049218023 0.245762712 0.128712871 0.254237288 101 6 0 112 3L:17843909-17844063 6 MED19 FBtr0345815|FBtr0075160 17843723|17843813 17844253|17844253 TCTTCC 6mer2-7 dme-miR-7-5p 3L - 17843936 17844045 3'utr MED19 FlyBase G28522.1 GCGCTAGCTTAATGAGATTTATTTAAACGCAAGTTATGGTACAAAACGCAAGAACGTTTTCGCTCTCGATTCCAGCTCTTCCCTCCACACAAACACACCCCTCGCCACGC 84 17843967 0.710408113 6 81 395 0.975806452 2.08278537 0.266129032 0.357142857 0.564516129 84 3 0 121 3L:17843936-17844045 6 57 2693 FBgn0036761 540.3333333 35.77333333 55.01 0.105490438 1.593365635 1.036175241 -2 -2 -2 0.01 dme-miR-92b-3p 6mer2-7 TGCAAT 3L 17849326 17849331 + 3L_17849326_17849331_+ 1 1 1 0 CG7430 FBtr0331810|FBtr0075140 17849144|17849144 17849372|17849601 3L + 17849309 17849360 3'utr CG7430 FlyBase G31172.1 TGGCGCCAGGCGTTAATTGCAATGTAATATGTGTATTAAGCTAGAATAAATA 6 17849325 0.97142634 4 6 39 1 1.041392685 0 0.5 0.727272727 6 0 0 11 3L:17849309-17849360 6 CG7430 FBtr0331810|FBtr0075140 17849144|17849144 17849372|17849601 TGCAAT 6mer2-7 dme-miR-92b-3p 3L + 17849301 17849360 3'utr CG7430 FlyBase G23584.1 AATGGTAATGGCGCCAGGCGTTAATTGCAATGTAATATGTGTATTAAGCTAGAATAAATA 6 17849309 0.979108581 5 6 39 1 1 0.1 0.333333333 0.6 6 0 0 10 3L:17849301-17849360 6 3.5 2694 FBgn0036762 1043.3 65.57333333 100.5333333 0.00335474 0.053375356 0.034814324 1 17 9 0.01 dme-miR-970-3p 7mer-m8 TCTTATG 3L 17882622 17882628 + 3L_17882622_17882628_+ 0.658999343 0.658999343 0.658999343 0 CG7408 FBtr0300281|FBtr0075142 17882612|17882612 17883653|17883653 3L + 17882607 17882654 stop_codon CG7408 FlyBase G31187.1 TAATTAAATGAAAATTCTTATGTAGGTTAAATATTTAATGATCTTGTT 17 17882621 0.849019879 2 17 176 1 1.278753601 0.052631579 0.117647059 0.210526316 17 0 0 19 3L:17882607-17882654 7 CG7408 FBtr0300281|FBtr0075142 17882612|17882612 17883653|17883653 TCTTATG 7mer-m8 dme-miR-970-3p 3L + 17882612 17882654 stop_codon CG7408 FlyBase G23597.1 AAATGAAAATTCTTATGTAGGTTAAATATTTAATGATCTTGTT 8 17882622 0.812022478 4 8 82 1 1 0 0.25 0.4 8 0 0 10 3L:17882612-17882654 7 11.5 2695 FBgn0036765 3.666666667 0.176666667 0.263333333 3.136363636 65.09433962 43.67088608 1 0 0.5 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 17883427 17883432 + 3L_17883427_17883432_+ 1 1 1 0 CG7408 FBtr0300281|FBtr0075142 17882612|17882612 17883653|17883653 3L + 17883430 17883474 3'utr CG7408 FlyBase G31188.1 TGAAAGGAGACGTCTTTCTTTGCCAGAAATATGAATGTATTAAGA 5 17883446 0.989648395 3 4 53 0.8 0.602059991 0 0 0 5 1 0 4 3L:17883430-17883474 2 CG7408 FBtr0300281|FBtr0075142 17882612|17882612 17883653|17883653 ATGTGA 6mer3-8 dme-miR-1003-3p 3L + 17883406 17883467 3'utr CG7408 FlyBase G23598.1 GGGGACGAATTAATAATTTTGATGTGAAAGGAGACGTCTTTCTTTGCCAGAAATATGAATGT 5 17883450 0.978400561 4 5 38 1 0.84509804 0.571428571 0.2 0.428571429 5 0 0 7 3L:17883406-17883467 6 1 2696 FBgn0036765 3.666666667 0.176666667 0.263333333 0.272727273 5.660377358 3.797468354 -19 -23 -21 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 17899204 17899210 - 3L_17899204_17899210_- 0.738653484 0.481730736 0.61019211 0.181671854 Prestin FBtr0075153|FBtr0075153|FBtr0075153 17898887|17898887|17898887 17899268|17899268|17899268 3L - 17899086 17899341 stop_codon Prestin FlyBase G37766.1 CGAAGGACCTTTTGAGATCTTCCCCACCCTGCACGATTGTGTGGAATATGCCAATGCCTGTCGAACAGCGTGAGAGGGTGTTCCTGCTCCAGACACCCCAGTTAACTGGGGCAGAGAGCCAAACCACGTTTTGTGATATGTCCAAGTGATAGCTTGTGAATCGTAGCATCAAAACCCCTTCCTAGTTGCTAAAATCTATTTTAAACTGAATAGAAACAATGTCGCCGTCTACAATCAAGCAGAATAGGCTAAGTTT 99 17899212 0.982029089 25 88 655 0.905172414 1.419129308 0.129310345 0.131313131 0.25862069 99 8 3 105 3L:17899086-17899341 7 Prestin FBtr0075153|FBtr0075153|FBtr0075153 17898887|17898887|17898887 17899268|17899268|17899268 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 17899085 17899239 3'utr Prestin FlyBase G28536.1 TAACTGGGGCAGAGAGCCAAACCACGTTTTGTGATATGTCCAAGTGATAGCTTGTGAATCGTAGCATCAAAACCCCTTCCTAGTTGCTAAAATCTATTTTAAACTGAATAGAAACAATGTCGCCGTCTACAATCAAGCAGAATAGGCTAAGTTTG 79 17899211 0.983440977 12 71 556 0.92 1.458637849 0.288 0.430379747 0.64 79 7 3 115 3L:17899085-17899239 7 67.5 2697 FBgn0036770 2001.45 68.62666667 105.7333333 0.033725549 0.98358267 0.638398487 2 1 1.5 0.01 dme-bantam-3p 6mer2-7 GATCTC 3L 17952969 17952974 - 3L_17952969_17952974_- 1 1 1 0 Eip75B FBtr0306814|FBtr0075150|FBtr0075149 17950951|17952160|17952160 17953640|17953640|17953640 3L - 17952945 17953039 3'utr Eip75B FlyBase G37797.1 ATTATTATTATTAAATTTTTAAATACCTAAAAACAAAACAATGTGTGTGAAATTTTTTATTGTGCGATCTCCAAGCAGAATTGAAGTGCAGTTTG 128 17952997 0.983848228 16 117 912 0.923566879 1.684246748 0.025477707 0.203125 0.350318471 128 10 2 145 3L:17952945-17953039 6 Eip75B FBtr0075149|FBtr0075150|FBtr0306814 17952160|17952160|17950951 17953640|17953640|17953640 GATCTC 6mer2-7 dme-bantam-3p 3L - 17952935 17953017 3'utr Eip75B FlyBase G28557.1 ATACCTAAAAACAAAACAATGTGTGTGAAATTTTTTATTGTGCGATCTCCAAGCAGAATTGAAGTGCAGTTTGCAACAAATTT 92 17952998 0.980630713 15 86 611 0.957142857 2.127104798 0.035714286 0.369565217 0.585714286 92 6 0 134 3L:17952935-17953017 6 50.5 2698 FBgn0000568 1336.92 32.88666667 50.30333333 0.03777339 1.535576728 1.003909615 23 24 23.5 0.01 dme-miR-190-5p 6mer3-8 ACATAT 3L 17953133 17953138 - 3L_17953133_17953138_- 1 1 1 0 Eip75B FBtr0306814|FBtr0075150|FBtr0075149 17950951|17952160|17952160 17953640|17953640|17953640 3L - 17953076 17953288 3'utr Eip75B FlyBase G37798.1 AACAAACCCAAGGCAGCGCTCTGATTTCGCATTAACTTTTCTTCAGCTGCTACCGAAAACGCCCCTCACCTCCCCCCCACCCAACCCTTCCTCCACACACCAACCGTCTTTCGACCCCTGATTGTTTTATAAGTTTTAAGCTCTTGTTGTACATATTAATTACGTTTATTGGTAACTATGTTTAGCGCTTTAGTTGTAGTTGGAGCAAAACTA 72 17953144 0.985459224 28 70 577 0.965517241 1.447158031 0.034482759 0.180555556 0.32183908 72 1 2 84 3L:17953076-17953288 6 Eip75B FBtr0075149|FBtr0075150|FBtr0306814 17952160|17952160|17950951 17953640|17953640|17953640 ACATAT 6mer3-8 dme-miR-190-5p 3L - 17953077 17953266 3'utr Eip75B FlyBase G28558.1 GATTTCGCATTAACTTTTCTTCAGCTGCTACCGAAAACGCCCCTCACCTCCCCCCCACCCAACCCTTCCTCCACACACCAACCGTCTTTCGACCCCTGATTGTTTTATAAGTTTTAAGCTCTTGTTGTACATATTAATTACGTTTATTGGTAACTATGTTTAGCGCTTTAGTTGTAGTTGGAGCAAAACT 58 17953166 0.921890226 22 55 451 0.941176471 1.602059991 0.058823529 0.344827586 0.552941176 58 4 1 80 3L:17953077-17953266 6 9 2699 FBgn0000568 1336.92 32.88666667 50.30333333 0.006731891 0.27366714 0.178914585 6 28 17 0.01 dme-miR-92b-3p 7mer-m1 TGCAATT 3L 17953464 17953470 - 3L_17953464_17953470_- 0.765586663 0.765586663 0.765586663 0 Eip75B FBtr0306814|FBtr0306813|FBtr0075148|FBtr0075151|FBtr0075150|FBtr0347013|FBtr0075149 17950951|17953356|17953356|17953356|17952160|17953356|17952160 17953640|17953640|17953640|17953640|17953640|17953640|17953640 3L - 17953457 17953486 3'utr Eip75B FlyBase G37800.1 GCAAAACCAACATGCATGCAATTTAAAACT 10 17953473 0.894101181 2 8 33 0.833333333 1 0.166666667 0.2 0.333333333 10 2 0 10 3L:17953457-17953486 7 Eip75B FBtr0075149|FBtr0075150|FBtr0347013|FBtr0075148|FBtr0075151|FBtr0306814|FBtr0306813 17952160|17952160|17953356|17953356|17953356|17950951|17953356 17953640|17953640|17953640|17953640|17953640|17953640|17953640 TGCAATT 7mer-m1 dme-miR-92b-3p 3L - 17953446 17953510 3'utr Eip75B FlyBase G28560.1 TTGAGACGTGTACAAAGTTTGAAAGCAAAACCAACATGCATGCAATTTAAAACTAATATTTAAAG 10 17953474 0.928639991 5 9 55 0.916666667 1.041392685 0 0.2 0.333333333 10 1 0 11 3L:17953446-17953510 7 7 2700 FBgn0000568 1336.92 32.88666667 50.30333333 0.005235915 0.21285222 0.139155788 3 4 3.5 0.01 dme-miR-14-3p 6mer2-7 AGACTG 3L 17953588 17953593 - 3L_17953588_17953593_- 1 1 1 0 Eip75B FBtr0306814|FBtr0306813|FBtr0075148|FBtr0075151|FBtr0075150|FBtr0347013|FBtr0075149 17950951|17953356|17953356|17953356|17952160|17953356|17952160 17953640|17953640|17953640|17953640|17953640|17953640|17953640 3L - 17953527 17953711 stop_codon Eip75B FlyBase G37801.1 CGCCGGCGAGTGTGGGCTCCCCCAATCCGGGCCTGAGCGCCGCCGTGCACAAGGTAATGCTGGAGGCGTAAGAGCGGGAGGAGGTAGGTGGTTTTACGCGGAGAAGTGGGAGAGACAGAGACTGGGAGTGGCAGTTCAGCGAAGCAGGAAGCAGGATCACTTGGAGCGGCGGGAGTTGAATTAAA 90 17953605 0.918980698 17 70 237 0.777777778 1.447158031 0.527777778 0.2 0.333333333 90 22 2 84 3L:17953527-17953711 6 Eip75B FBtr0075149|FBtr0075150|FBtr0347013|FBtr0075148|FBtr0075151|FBtr0306814|FBtr0306813 17952160|17952160|17953356|17953356|17953356|17950951|17953356 17953640|17953640|17953640|17953640|17953640|17953640|17953640 AGACTG 6mer2-7 dme-miR-14-3p 3L - 17953575 17953616 3'utr Eip75B FlyBase G28562.1 ACGCGGAGAAGTGGGAGAGACAGAGACTGGGAGTGGCAGTTC 52 17953605 0.786845943 5 37 126 0.720930233 1.093421685 0.476744186 0.423076923 0.651162791 52 20 4 62 3L:17953575-17953616 6 55.5 2701 FBgn0000568 1336.92 32.88666667 50.30333333 0.041513329 1.687614028 1.103306607 12 12 12 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3L 1802052 1802057 + 3L_1802052_1802057_+ 1 1 1 0 Patj FBtr0301625|FBtr0072781|FBtr0072779 1801823|1801823|1801823 1802184|1802184|1802184 3L + 1802036 1802071 3'utr Patj FlyBase G27229.1 ATTATTAACGCCGAATTGTGTTTGTCCCCTGAAAAC 16 1802051 0.825775458 3 16 118 1 1.301029996 0.45 0.1875 0.35 16 0 0 20 3L:1802036-1802071 6 Patj FBtr0301625|FBtr0072781|FBtr0072779 1801823|1801823|1801823 1802184|1802184|1802184 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 1802030 1802069 3'utr Patj FlyBase G20610.1 ATGCATATTATTAACGCCGAATTGTGTTTGTCCCCTGAAA 8 1802051 0.83287874 4 8 65 1 1 0.7 0.25 0.4 8 0 0 10 3L:1802030-1802069 6 11.5 2702 FBgn0067864 663.1966667 24.43 37.27666667 0.017340256 0.470732706 0.308503979 1 1 1 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 1802151 1802158 + 3L_1802151_1802158_+ 0.500120318 0.500120318 0.500120318 0 Patj FBtr0301625|FBtr0072781|FBtr0072779 1801823|1801823|1801823 1802184|1802184|1802184 3L + 1802126 1802175 3'utr Patj FlyBase G27230.1 TTAACATGGTATTTCCAGAGTGTATGTACTTAAACTAAATTAAATAATGT 111 1802150 0.7685985 3 110 878 1 2.103803721 0.023622047 0.117117117 0.228346457 111 0 0 127 3L:1802126-1802175 8 Patj FBtr0301625|FBtr0072781|FBtr0072779 1801823|1801823|1801823 1802184|1802184|1802184 GTACTTAA 8mer-A1 dme-miR-252-5p 3L + 1802125 1802185 3'utr Patj FlyBase G20611.1 TTTAACATGGTATTTCCAGAGTGTATGTACTTAAACTAAATTAAATAATGTACCTTCCGTA 82 1802150 0.752059427 5 79 628 0.967741935 2.079181246 0.008064516 0.365853659 0.580645161 82 4 0 120 3L:1802125-1802185 8 92.5 2703 FBgn0067864 663.1966667 24.43 37.27666667 0.139475972 3.786328285 2.481445051 1 1 1 0.01 dme-bantam-3p 8mer-A1 TGATCTCA 3L 18168772 18168779 - 3L_18168772_18168779_- 0.631136385 0.631136385 0.631136385 0 hid FBtr0075133 18167743 18170010 3L - 18168761 18168804 3'utr hid FlyBase G37832.1 AAAAACCAATTCCCAAAAATCGCATTGATCTCATGGATTTATAC 30 18168780 0.742862364 5 30 214 1 1.579783597 0.026315789 0.233333333 0.394736842 30 0 0 38 3L:18168761-18168804 8 hid FBtr0075133 18167743 18170010 TGATCTCA 8mer-A1 dme-bantam-3p 3L - 18168761 18168796 3'utr hid FlyBase G28591.1 ATTCCCAAAAATCGCATTGATCTCATGGATTTATAC 20 18168780 0.776140948 2 20 136 1 1.51851394 0 0.3 0.575757576 20 0 0 33 3L:18168761-18168796 8 25 2704 FBgn0003997 37.33333333 1.456666667 2.223333333 0.669642857 17.1624714 11.24437781 1 1 1 0.01 dme-miR-2a-2-5p 6mer2-7 GATGAG 3L 18397603 18397608 - 3L_18397603_18397608_- 1 1 1 0 rpr FBtr0075120 18397533 18398037 3L - 18397576 18397621 3'utr rpr FlyBase G37837.1 AGAAAAAAACGAAGATGAGTCGAAGTTGGCTAAAAATTGCATCAAT 16 18397606 0.960397547 3 16 81 1 1.230448921 0.117647059 0.0625 0.117647059 16 0 0 17 3L:18397576-18397621 6 rpr FBtr0075120 18397533 18398037 GATGAG 6mer2-7 dme-miR-2a-2-5p 3L - 18397562 18397627 3'utr rpr FlyBase G28594.1 AACCCCAGAAAAAAACGAAGATGAGTCGAAGTTGGCTAAAAATTGCATCAATTTTTTGTCAAACAA 8 18397606 0.992888931 3 7 35 1 1.113943352 0.076923077 0.5 0.692307692 8 0 0 13 3L:18397562-18397627 6 10.5 2705 FBgn0011706 109.3166667 15.44666667 23.89666667 0.096051227 0.679758308 0.439391826 -2 -2 -2 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 18397836 18397842 - 3L_18397836_18397842_- 0.801938177 0.799854287 0.800896232 0.00147354 rpr FBtr0075120|FBtr0075120|FBtr0075120 18397533|18397533|18397533 18398037|18398037|18398037 3L - 18397793 18397941 3'utr rpr FlyBase G37840.1 ACAGTCACCACTCATCAGCCGACGGCACTCGATTTCTACTGCAGTCAAGGACACAGAGCCACAACACCCACCCAATTTTAGTTTACTCATCAAAGCGATTGTGATAATGGTTTTGTTTCTACAAAAAAGCGGAGGAAAAATTTGAAAAA 3183 18397843 0.973742105 27 3002 26899 0.9450883 1.742268886 0.061810155 0.121269243 0.228200883 3183 138 61 3425 3L:18397793-18397941 7 rpr FBtr0075120|FBtr0075120|FBtr0075120 18397533|18397533|18397533 18398037|18398037|18398037 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 18397795 18397940 3'utr rpr FlyBase G28597.1 CAGTCACCACTCATCAGCCGACGGCACTCGATTTCTACTGCAGTCAAGGACACAGAGCCACAACACCCACCCAATTTTAGTTTACTCATCAAAGCGATTGTGATAATGGTTTTGTTTCTACAAAAAAGCGGAGGAAAAATTTGAAA 2243 18397843 0.98718596 30 2117 18575 0.944877345 1.891829385 0.062626263 0.380294249 0.598845599 2243 150 41 3274 3L:18397795-18397940 7 2669.5 2706 FBgn0011706 109.3166667 15.44666667 23.89666667 24.41988108 172.8204575 111.7101409 1 1 1 0.01 dme-miR-305-5p 8mer-A1 AGTACAAA 3L 18397975 18397982 - 3L_18397975_18397982_- 0.605654138 0.605654138 0.605654138 0 rpr FBtr0075120 18397533 18398037 3L - 18397944 18398016 3'utr rpr FlyBase G37841.1 ACGGGGAAAACCAATAGTCCAGTCCAAAATCCAGAGTACAAAGGAAATAAGCATGAGCCAACCCAAAACCCAA 107 18397969 0.889056896 6 102 179 0.961832061 1.799340549 0.122137405 0.168224299 0.320610687 107 4 1 126 3L:18397944-18398016 8 rpr FBtr0075120 18397533 18398037 AGTACAAA 8mer-A1 dme-miR-305-5p 3L - 18397943 18398016 3'utr rpr FlyBase G28598.1 ACGGGGAAAACCAATAGTCCAGTCCAAAATCCAGAGTACAAAGGAAATAAGCATGAGCCAACCCAAAACCCAAA 70 18397969 0.900454736 5 67 99 0.923809524 1.384711743 0.095238095 0.357142857 0.571428571 70 5 3 97 3L:18397943-18398016 8 65.5 2707 FBgn0011706 109.3166667 15.44666667 23.89666667 0.599176704 4.240397065 2.740968057 -13 -13 -13 0.01 dme-miR-986-5p 6mer3-8 ATTCGA 3L 1850999 1851004 - 3L_1850999_1851004_- 1 1 1 0 CNMa FBtr0332672|FBtr0303155 1850913|1850913 1851347|1851347 3L - 1850994 1851036 3'utr CNMa FlyBase G33541.1 AATATATAAATATTATCTATGATTCTTGTTGTATTCGAAATAC 16 1851020 0.714863515 6 15 178 0.952380952 1.301029996 0 0.3125 0.476190476 16 1 0 20 3L:1850994-1851036 6 CNMa FBtr0332672|FBtr0303155 1850913|1850913 1851347|1851347 ATTCGA 6mer3-8 dme-miR-986-5p 3L - 1850986 1851030 3'utr CNMa FlyBase G25364.1 TAAATATTATCTATGATTCTTGTTGTATTCGAAATACATTAAATT 11 1851021 0.993203851 5 10 126 0.941176471 1.204119983 0.058823529 0.545454545 0.705882353 11 1 0 16 3L:1850986-1851030 6 5.5 2708 FBgn0035282 2.666666667 0.21 0.333333333 2.0625 26.19047619 16.5 16 17 16.5 0.01 dme-miR-252-5p 7mer-m8 GTACTTA 3L 1851142 1851148 - 3L_1851142_1851148_- 0.588299917 0.588299917 0.588299917 0 CNMa FBtr0332672|FBtr0303155 1850913|1850913 1851347|1851347 3L - 1851041 1851159 3'utr CNMa FlyBase G33542.1 ACGATTACATTGTACTTATACATAATGTCTCGACTTACACACACTGACACACATCTGATACCCGCTCTCTGCACACCGACATTCACACACACGCACACACCGAAGTATTTCCATATTAG 28 1851149 0.872215485 9 26 176 0.939393939 1.491361694 0.333333333 0.178571429 0.303030303 28 2 0 31 3L:1851041-1851159 7 CNMa FBtr0332672|FBtr0303155 1850913|1850913 1851347|1851347 GTACTTA 7mer-m8 dme-miR-252-5p 3L - 1851082 1851157 3'utr CNMa FlyBase G25365.1 GATTACATTGTACTTATACATAATGTCTCGACTTACACACACTGACACACATCTGATACCCGCTCTCTGCACACCG 15 1851149 0.777190814 7 14 84 0.958333333 1.361727836 0.333333333 0.4 0.625 15 1 0 23 3L:1851082-1851157 7 7 2709 FBgn0035282 2.666666667 0.21 0.333333333 2.625 33.33333333 21 1 1 1 0.01 dme-miR-317-5p 7mer-A1 TATCCCA 3L 1858304 1858310 + 3L_1858304_1858310_+ 0.823349562 0.823349562 0.823349562 0 CG12024 FBtr0072833|FBtr0303152|FBtr0072832 1858183|1858183|1858183 1859047|1859047|1859047 3L + 1858187 1858359 3'utr CG12024 FlyBase G27237.1 CGGATCGTTTTGTTATCTAATCTCAACGGCCATAACGTGACGATCACGTGCGCTAGTAATCTCCCCAGTTCCCCAGTCCAAAGTAATCTCCGGGCAAGAACGAAATCTGAAATCTCCTATCCCAATCTCGACACAAAGATGCGATGGTATTACCCTAGTTTTAACCTTAAGTG 74 1858293 0.840945916 19 68 381 0.925925926 1.875061263 0.135802469 0.094594595 0.172839506 74 6 0 75 3L:1858187-1858359 7 CG12024 FBtr0072832|FBtr0303152|FBtr0072833 1858183|1858183|1858183 1859047|1859047|1859047 TATCCCA 7mer-A1 dme-miR-317-5p 3L + 1858246 1858353 3'utr CG12024 FlyBase G20616.1 TCTCCCCAGTTCCCCAGTCCAAAGTAATCTCCGGGCAAGAACGAAATCTGAAATCTCCTATCCCAATCTCGACACAAAGATGCGATGGTATTACCCTAGTTTTAACCT 37 1858294 0.970700306 8 30 178 0.849056604 1.176091259 0.20754717 0.351351351 0.547169811 37 6 2 45 3L:1858246-1858353 7 23 2710 FBgn0035283 210.8633333 14.46 22.18 0.109075388 1.590594744 1.036970243 11 10 10.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3L 1858645 1858651 + 3L_1858645_1858651_+ 0.823349562 0.823349562 0.823349562 0 CG12024 FBtr0072833|FBtr0303152|FBtr0072832 1858183|1858183|1858183 1859047|1859047|1859047 3L + 1858622 1858696 3'utr CG12024 FlyBase G27240.2 TAGCACTTTGCTTAGCCCAAAACCTAGTCATGAAGCGGAACTCGAGCCACTTATTGTACAGTAATAGAAACTACC 23 1858652 0.938010944 9 21 95 0.931034483 1.431363764 0.379310345 0.173913043 0.344827586 23 2 0 27 3L:1858622-1858696 7 CG12024 FBtr0072832|FBtr0303152|FBtr0072833 1858183|1858183|1858183 1859047|1859047|1859047 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L + 1858596 1858678 3'utr CG12024 FlyBase G20619.1 AGGAATCGGAGGCGAGTCCCCCAGTATAGCACTTTGCTTAGCCCAAAACCTAGTCATGAAGCGGAACTCGAGCCACTTATTGT 25 1858652 0.951272565 9 24 105 0.972972973 1.556302501 0.27027027 0.36 0.567567568 25 1 0 36 3L:1858596-1858678 7 18 2711 FBgn0035283 210.8633333 14.46 22.18 0.085363348 1.244813278 0.81154193 -7 -7 -7 0.01 dme-miR-965-3p 6mer3-8 TACGCT 3L 1858900 1858905 + 3L_1858900_1858905_+ 1 1 1 0 CG12024 FBtr0072833|FBtr0303152|FBtr0072832 1858183|1858183|1858183 1859047|1859047|1859047 3L + 1858889 1858928 3'utr CG12024 FlyBase G27242.1 ATCGCAGATCTTACGCTGGATTAACATGCGTGCTATAAAC 8 1858915 0.796853823 4 7 48 0.9 0.954242509 0.1 0.25 0.4 8 1 0 9 3L:1858889-1858928 6 CG12024 FBtr0072832|FBtr0303152|FBtr0072833 1858183|1858183|1858183 1859047|1859047|1859047 TACGCT 6mer3-8 dme-miR-965-3p 3L + 1858882 1858921 3'utr CG12024 FlyBase G20620.1 CGATCCTATCGCAGATCTTACGCTGGATTAACATGCGTGC 5 1858912 0.972540504 4 4 27 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 3L:1858882-1858921 6 6 2712 FBgn0035283 210.8633333 14.46 22.18 0.028454449 0.414937759 0.270513977 -15 -12 -13.5 0.01 dme-bantam-3p 8mer-A1 TGATCTCA 3L 1859248 1859255 - 3L_1859248_1859255_- 0.631136385 0.631136385 0.631136385 0 R FBtr0332671|FBtr0303154|FBtr0072867 1859113|1859113|1859113 1860656|1860656|1860656 3L - 1859212 1859266 3'utr R FlyBase G33545.1 CACAGAGCCTCTGATCTCAGAATCCTGGCAGTCCCGAATTCGCGACGCAGTAGGT 76 1859256 0.708962651 6 70 276 0.867924528 1.361727836 0.08490566 0.263157895 0.471698113 76 11 3 92 3L:1859212-1859266 8 R FBtr0332671|FBtr0072867|FBtr0303154 1859113|1859113|1859113 1860656|1860656|1860656 TGATCTCA 8mer-A1 dme-bantam-3p 3L - 1859212 1859267 3'utr R FlyBase G25367.1 ACACAGAGCCTCTGATCTCAGAATCCTGGCAGTCCCGAATTCGCGACGCAGTAGGT 55 1859255 0.727588916 5 47 201 0.875 1.243038049 0.05 0.309090909 0.525 55 7 3 70 3L:1859212-1859267 8 47 2713 FBgn0004636 4610.196667 206.99 319.1866667 0.010194793 0.227064109 0.147249259 1 0 0.5 0.01 dme-miR-283-5p 7mer-A1 GATATTA 3L 1862987 1862993 - 3L_1862987_1862993_- 0.782911824 0.782911824 0.782911824 0 HBS1 FBtr0345807|FBtr0072866 1862879|1862879 1863032|1863032 3L - 1862938 1863026 3'utr HBS1 FlyBase G33559.1 GACCGCGCTGGATTTTGTACGAAATTTTAGTTAGATATTAACTTTTGTTGATTTCCTAAATATACATAGTTTATATGAATTGATTAAAT 18 1862979 0.994271384 6 16 205 0.9 1.255272505 0.05 0.111111111 0.2 18 2 0 18 3L:1862938-1863026 7 HBS1 FBtr0345807|FBtr0072866 1862879|1862879 1863032|1863032 GATATTA 7mer-A1 dme-miR-283-5p 3L - 1862949 1862991 3'utr HBS1 FlyBase G25379.1 TATTAACTTTTGTTGATTTCCTAAATATACATAGTTTATATGA 14 1862979 0.729864484 4 13 172 0.904761905 1.278753601 0.047619048 0.428571429 0.619047619 14 2 0 19 3L:1862949-1862991 5 10 2714 FBgn0042712 481 25.88 39.68 0.020790021 0.386398764 0.252016129 -14 -14 -14 0.01 dme-miR-305-5p 7mer-m1 GTACAAT 3L 18668904 18668910 - 3L_18668904_18668910_- 0.765586663 0.765586663 0.765586663 0 Capr FBtr0345806|FBtr0075098 18668151|18668151 18669033|18669033 3L - 18668883 18668952 3'utr Capr FlyBase G37851.1 AAGGAAACCAATCATCAACATGCAAGTAATGGCCACGTAGACGTACAATTATTGTTACGCAAACCACTCT 18 18668923 0.953800518 8 17 81 0.947368421 1.255272505 0 0.055555556 0.105263158 18 1 0 18 3L:18668883-18668952 7 Capr FBtr0345806|FBtr0075098 18668151|18668151 18669033|18669033 GTACAAT 7mer-m1 dme-miR-305-5p 3L - 18668875 18668943 3'utr Capr FlyBase G28602.1 AATCATCAACATGCAAGTAATGGCCACGTAGACGTACAATTATTGTTACGCAAACCACTCTCAACCATA 12 18668923 0.956047127 5 11 48 1 1.204119983 0.0625 0.25 0.4375 12 0 0 16 3L:18668875-18668943 7 10 2715 FBgn0042134 2821.936667 86.24666667 132.2433333 0.003543666 0.11594651 0.075618179 13 13 13 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3L 1867575 1867580 + 3L_1867575_1867580_+ 1 1 1 0 CG12025 FBtr0345381|FBtr0072834|FBtr0332668 1867491|1867491|1867491 1869491|1867863|1868644 3L + 1867491 1867609 stop_codon CG12025 FlyBase G27247.1 AAGCGTAAGCGGACATCTGGACAGTCGAGCTGGTTGATCCATGGACGAAGAGAGTGGGAGAAGCCCCATCTATAAATATAAATCTGTGTTTGTTTATACCCGACCCGTATAAACAACTT 34 1867573 0.989900228 8 29 283 0.88372093 1.579783597 0.186046512 0.205882353 0.372093023 34 5 0 38 3L:1867491-1867609 6 CG12025 FBtr0332668|FBtr0072834|FBtr0345381 1867491|1867491|1867491 1868644|1867863|1869491 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 1867562 1867590 3'utr CG12025 FlyBase G20624.1 ATAAATATAAATCTGTGTTTGTTTATACC 11 1867574 0.746220819 3 6 102 0.611111111 0.740362689 0 0.545454545 0.722222222 11 6 1 11 3L:1867562-1867590 6 15.5 2716 FBgn0035285 812.7766667 48.59666667 74.35333333 0.019070429 0.318951917 0.20846409 2 1 1.5 0.01 dme-miR-283-5p 6mer2-7 GATATT 3L 1868260 1868265 + 3L_1868260_1868265_+ 1 1 1 0 CG12025 FBtr0345381|FBtr0332668 1867491|1867491 1869491|1868644 3L + 1868141 1868356 3'utr CG12025 FlyBase G27250.2 AGACCTTAGTCAACGTCGAATTATGATTATGATTATGTTAAAGCCTAATGGCAATGCAGCGAGGACTCCTCGAGCAACCATTATAATACCAAGCTACTAGTGATGTAAGACGATGCGCCGATATTGCAATACGTTCTTTTATAGCTATAGTGATGACGCGTCTCTTTTCCGCTGACCTTTAACCCCGTCCCCTAATGAAATTACATCTCACACTCA 115 1868241 0.853697283 28 105 661 0.909774436 2.08278537 0.187969925 0.139130435 0.255639098 115 12 0 121 3L:1868141-1868356 6 CG12025 FBtr0332668|FBtr0345381 1867491|1867491 1868644|1869491 GATATT 6mer2-7 dme-miR-283-5p 3L + 1868180 1868286 3'utr CG12025 FlyBase G20626.2 AAAGCCTAATGGCAATGCAGCGAGGACTCCTCGAGCAACCATTATAATACCAAGCTACTAGTGATGTAAGACGATGCGCCGATATTGCAATACGTTCTTTTATAGCT 76 1868241 0.99500962 12 61 331 0.894736842 1.40654018 0.307017544 0.328947368 0.552631579 76 9 3 102 3L:1868180-1868286 6 20 2717 FBgn0035285 812.7766667 48.59666667 74.35333333 0.024607006 0.411550861 0.268985923 19 19 19 0.01 dme-miR-33-5p 7mer-A1 AATGCAA 3L 18683015 18683021 - 3L_18683015_18683021_- 0.782892064 0.782911824 0.782901944 1.39E-05 Chmp1 FBtr0345383 18682893 18683218 3L - 18683003 18683083 3'utr Chmp1 FlyBase G37880.1 CTTTAAGTGTAAGTGTGCTGTTTGTATAGGCTTCAAACGGATTATGATTTACATGCTTTTCTAATGCAATATACGATAATC 11 18683035 0.776829692 7 11 99 1 1.041392685 0.090909091 0 0 11 0 0 11 3L:18683003-18683083 7 Chmp1 FBtr0345383 18682893 18683218 AATGCAA 7mer-A1 dme-miR-33-5p 3L - 18683008 18683083 3'utr Chmp1 FlyBase G28623.1 CTTTAAGTGTAAGTGTGCTGTTTGTATAGGCTTCAAACGGATTATGATTTACATGCTTTTCTAATGCAATATACGA 8 18683037 0.986234576 6 7 66 0.933333333 1.146128036 0.066666667 0.625 0.8 8 1 0 14 3L:18683008-18683083 7 2 2718 FBgn0036805 502.6666667 72.55666667 110.72 0.00397878 0.027564662 0.018063584 14 16 15 0.01 dme-miR-1006-3p 6mer2-7 GAATTT 3L 18683191 18683196 - 3L_18683191_18683196_- 1 1 1 0 Chmp1 FBtr0075092|FBtr0345383 18683142|18682893 18683218|18683218 3L - 18683172 18683205 3'utr Chmp1 FlyBase G37882.1 CTGCCCGTTGAATTTCTGTTTTAGCAATTAAGTA 18 18683186 0.672684232 6 15 183 0.772727273 0.929418926 0.363636364 0.166666667 0.318181818 18 4 1 17 3L:18683172-18683205 6 Chmp1 FBtr0345383|FBtr0075092 18682893|18683142 18683218|18683218 GAATTT 6mer2-7 dme-miR-1006-3p 3L - 18683171 18683201 3'utr Chmp1 FlyBase G28625.1 CCGTTGAATTTCTGTTTTAGCAATTAAGTAC 13 18683185 0.690762213 5 10 117 0.764705882 0.812913357 0.176470588 0.307692308 0.470588235 13 3 1 13 3L:18683171-18683201 6 14.5 2719 FBgn0036805 502.6666667 72.55666667 110.72 0.028846154 0.1998438 0.130960983 -10 -11 -10.5 0.01 dme-miR-307a-3p 6mer3-8 GGTTGT 3L 1868455 1868460 + 3L_1868455_1868460_+ 1 1 1 0 CG12025 FBtr0345381|FBtr0332668 1867491|1867491 1869491|1868644 3L + 1868421 1868471 3'utr CG12025 FlyBase G27251.1 GTATAATTTCATTTTAAGAATGAATGCTGAATATGGTTGTATTAAAACGAA 17 1868455 0.98784666 5 15 135 0.923076923 1.079181246 0.076923077 0.411764706 0.615384615 17 1 1 24 3L:1868421-1868471 6 CG12025 FBtr0332668|FBtr0345381 1867491|1867491 1868644|1869491 GGTTGT 6mer3-8 dme-miR-307a-3p 3L + 1868399 1868471 3'utr CG12025 FlyBase G20627.1 CAGCCGCTTAGTTGTTAATGTCGTATAATTTCATTTTAAGAATGAATGCTGAATATGGTTGTATTAAAACGAA 16 1868454 0.984657832 7 16 128 1 1.414973348 0.038461538 0.4375 0.653846154 16 0 0 26 3L:1868399-1868471 6 14 2720 FBgn0035285 812.7766667 48.59666667 74.35333333 0.017224904 0.288085603 0.188290146 0 1 0.5 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 18750833 18750838 - 3L_18750833_18750838_- 0.803995837 1 0.901997919 0.138595899 ftz-f1 FBtr0304627|FBtr0347045 18750605|18750605 18752745|18752745 3L - 18750782 18750847 3'utr ftz-f1 FlyBase G37894.1 TTGATTACGATGTGAACCTGTTATTGCAAATGAAAAGTGATTTTAACTATTAAGAAATCTATATAT 107 18750809 0.744911278 15 104 807 0.976744186 2.100370545 0.170542636 0.196261682 0.333333333 107 3 0 126 3L:18750782-18750847 6 ftz-f1 FBtr0304627|FBtr0347045 18750605|18750605 18752745|18752745 ATGTGA 6mer3-8 dme-miR-1003-3p 3L - 18750790 18750862 3'utr ftz-f1 FlyBase G28632.1 ATGTTTATTGTAAAATTGATTACGATGTGAACCTGTTATTGCAAATGAAAAGTGATTTTAACTATTAAGAAAT 97 18750809 0.984269679 14 91 757 0.937984496 2.08278537 0.240310078 0.237113402 0.426356589 97 8 0 121 3L:18750790-18750862 6 15 2721 FBgn0001078 1154.326667 23.85 36.73 0.012994588 0.628930818 0.408385516 -29 -29 -29 0.01 dme-miR-317-3p 7mer-A1 GTGTTCA 3L 18752045 18752051 - 3L_18752045_18752051_- 0.823349562 0.823349562 0.823349562 0 ftz-f1 FBtr0304627|FBtr0347045|FBtr0075086|FBtr0075087 18750605|18750605|18751747|18751747 18752745|18752745|18752745|18752745 3L - 18752021 18752092 3'utr ftz-f1 FlyBase G37897.2 GGAAAATCCATACAAAGAAAATGAAAACAAAGCAAATTTAGGTGTTCATGGTATGAATGTATGTGTATATTA 21 18752044 0.982275511 7 19 157 0.956521739 1.342422681 0.130434783 0.095238095 0.173913043 21 1 0 22 3L:18752021-18752092 7 ftz-f1 FBtr0075086|FBtr0075087|FBtr0304627|FBtr0347045 18751747|18751747|18750605|18750605 18752745|18752745|18752745|18752745 GTGTTCA 7mer-A1 dme-miR-317-3p 3L - 18752034 18752067 3'utr ftz-f1 FlyBase G28634.1 AACAAAGCAAATTTAGGTGTTCATGGTATGAATG 11 18752055 0.847236164 3 11 79 1 1.176091259 0 0.272727273 0.466666667 11 0 0 15 3L:18752034-18752067 7 14 2722 FBgn0001078 1154.326667 23.85 36.73 0.012128283 0.587002096 0.381159815 -7 4 -1.5 0.01 dme-miR-2b-2-5p 7mer-m8 TTGAAGA 3L 18752169 18752175 - 3L_18752169_18752175_- 0.631525999 0.631525999 0.631525999 0 ftz-f1 FBtr0304627|FBtr0347045|FBtr0075086|FBtr0075087 18750605|18750605|18751747|18751747 18752745|18752745|18752745|18752745 3L - 18752114 18752190 3'utr ftz-f1 FlyBase G37898.1 TAGTATCGTTCCCACTTGAAGATCGATTCTTGTATTTTTTTGCGCCAAGTGTCTTGCATAGTATTTGCGTCTAATCT 17 18752175 0.782322564 8 16 134 0.954545455 1.322219295 0.181818182 0.294117647 0.454545455 17 1 0 21 3L:18752114-18752190 7 ftz-f1 FBtr0075086|FBtr0075087|FBtr0304627|FBtr0347045 18751747|18751747|18750605|18750605 18752745|18752745|18752745|18752745 TTGAAGA 7mer-m8 dme-miR-2b-2-5p 3L - 18752155 18752189 3'utr ftz-f1 FlyBase G28635.1 AGTATCGTTCCCACTTGAAGATCGATTCTTGTATT 5 18752175 0.781863273 3 5 38 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3L:18752155-18752189 7 8.5 2723 FBgn0001078 1154.326667 23.85 36.73 0.0073636 0.35639413 0.231418459 0 0 0 0.01 dme-miR-184-5p 6mer3-8 TGATAA 3L 18752445 18752450 - 3L_18752445_18752450_- 1 1 1 0 ftz-f1 FBtr0304627|FBtr0347045|FBtr0075086|FBtr0075087 18750605|18750605|18751747|18751747 18752745|18752745|18752745|18752745 3L - 18752364 18752459 3'utr ftz-f1 FlyBase G37902.1 TGTAGTCCCTGATAAAGCAATTTTAAAACACTTGAACCTAAACGAGAATATGTAGTAGATGTATGGATTTAAATTTAAATACGGCAAGGAGAAACA 24 18752447 0.984226526 9 20 156 0.846153846 1.342422681 0.115384615 0.083333333 0.153846154 24 4 0 22 3L:18752364-18752459 6 ftz-f1 FBtr0075086|FBtr0075087|FBtr0304627|FBtr0347045 18751747|18751747|18750605|18750605 18752745|18752745|18752745|18752745 TGATAA 6mer3-8 dme-miR-184-5p 3L - 18752442 18752480 3'utr ftz-f1 FlyBase G28638.1 TAAATTAATTCGTGTTTTATTTGTAGTCCCTGATAAAGC 7 18752449 0.81846914 3 5 77 0.875 0.84509804 0.5 0.142857143 0.25 7 1 0 7 3L:18752442-18752480 6 6 2724 FBgn0001078 1154.326667 23.85 36.73 0.005197835 0.251572327 0.163354206 -3 -1 -2 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3L 18752510 18752515 - 3L_18752510_18752515_- 1 1 1 0 ftz-f1 FBtr0304627|FBtr0347045|FBtr0075086|FBtr0075087 18750605|18750605|18751747|18751747 18752745|18752745|18752745|18752745 3L - 18752487 18752591 3'utr ftz-f1 FlyBase G37903.1 CCAACTATCACACCTATACACACACATGCACACATTTGTTGATTCAATGTTAATTATTATTACGTTTACGGTTAGGTCTAGTTTACGTTTAACTAATTAATTAAT 17 18752542 0.992254524 12 15 167 0.9 1.255272505 0.1 0.117647059 0.25 17 2 0 18 3L:18752487-18752591 6 ftz-f1 FBtr0075086|FBtr0075087|FBtr0304627|FBtr0347045 18751747|18751747|18750605|18750605 18752745|18752745|18752745|18752745 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3L - 18752509 18752566 3'utr ftz-f1 FlyBase G28639.1 ATGCACACATTTGTTGATTCAATGTTAATTATTATTACGTTTACGGTTAGGTCTAGTT 14 18752542 0.990484396 9 14 149 1 1.431363764 0.111111111 0.571428571 0.777777778 14 0 0 27 3L:18752509-18752566 6 4.5 2725 FBgn0001078 1154.326667 23.85 36.73 0.003898377 0.188679245 0.122515655 27 27 27 0.01 "dme-miR-995-3p,dme-miR-998-3p" 7mer-A1 GGTGCTA 3L 18802504 18802510 - 3L_18802504_18802510_- 0.823349562 0.823349562 0.823349562 0 CG14073 FBtr0075084|FBtr0332801 18802263|18802263 18802781|18802781 3L - 18802486 18802522 3'utr CG14073 FlyBase G37922.1 AAGTGATACAAAGGTGCTATACACACTCAAAACGAAG 23 18802503 0.770038213 3 19 99 0.8 1 0.24 0.086956522 0.16 23 4 1 20 3L:18802486-18802522 7 CG14073 FBtr0332801|FBtr0075084 18802263|18802263 18802781|18802781 GGTGCTA 7mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 3L - 18802492 18802535 3'utr CG14073 FlyBase G28660.1 TAGAGCTAATGCAAAGTGATACAAAGGTGCTATACACACTCAAA 11 18802503 0.965074885 3 9 48 0.923076923 0.77815125 0.461538462 0.181818182 0.307692308 11 0 1 12 3L:18802492-18802535 7 16.5 2726 FBgn0036814 1280.663333 19.88666667 30.67333333 0.012883948 0.829701643 0.537926538 -7 -7 -7 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 3L 18822088 18822093 + 3L_18822088_18822093_+ 1 1 1 0 HipHop FBtr0075056|FBtr0075057 18821971|18821971 18822353|18822353 3L + 18822069 18822134 3'utr HipHop FlyBase G31237.1 TAAAGAAAGACAGAGATGTTAGCTTGGCAGGAGCCACAGAAAGATAGCCGCCATTTGGAGATTTCC 7 18822086 0.958206453 4 7 35 1 0.954242509 0.222222222 0.142857143 0.333333333 7 0 0 9 3L:18822069-18822134 6 HipHop FBtr0075056|FBtr0075057 18821971|18821971 18822353|18822353 TAGCTT 6mer3-8 dme-miR-79-3p 3L + 18822076 18822134 3'utr HipHop FlyBase G23632.1 AGACAGAGATGTTAGCTTGGCAGGAGCCACAGAAAGATAGCCGCCATTTGGAGATTTCC 8 18822086 0.821962176 6 8 35 1 1.176091259 0.266666667 0.625 0.8 8 0 0 15 3L:18822076-18822134 6 3.5 2727 FBgn0036815 593.3433333 65.71333333 100.9466667 0.005898777 0.053261641 0.034671774 2 2 2 0.01 dme-miR-304-5p 6mer2-7 GAGATT 3L 18822126 18822131 + 3L_18822126_18822131_+ 1 1 1 0 HipHop FBtr0075056|FBtr0075057 18821971|18821971 18822353|18822353 3L + 18822069 18822134 3'utr HipHop FlyBase G31237.1 TAAAGAAAGACAGAGATGTTAGCTTGGCAGGAGCCACAGAAAGATAGCCGCCATTTGGAGATTTCC 7 18822124 0.958206453 4 7 35 1 0.954242509 0.222222222 0.142857143 0.333333333 7 0 0 9 3L:18822069-18822134 6 HipHop FBtr0075056|FBtr0075057 18821971|18821971 18822353|18822353 GAGATT 6mer2-7 dme-miR-304-5p 3L + 18822076 18822134 3'utr HipHop FlyBase G23632.1 AGACAGAGATGTTAGCTTGGCAGGAGCCACAGAAAGATAGCCGCCATTTGGAGATTTCC 8 18822123 0.821962176 6 8 35 1 1.176091259 0.266666667 0.625 0.8 8 0 0 15 3L:18822076-18822134 6 3 2728 FBgn0036815 593.3433333 65.71333333 100.9466667 0.005056095 0.045652836 0.029718663 2 3 2.5 0.01 dme-miR-986-5p 6mer3-8 ATTCGA 3L 18827912 18827917 + 3L_18827912_18827917_+ 1 1 1 0 Cat FBtr0075058 18827897 18828188 3L + 18827897 18827956 stop_codon Cat FlyBase G31253.1 AAGCTGAGCGAGCGGATTCGACGGATCAGACTTGGTTTTTGGCCTTAATTACGATTAATC 18 18827934 0.987782192 7 16 139 0.909090909 1.301029996 0 0.222222222 0.363636364 18 2 0 20 3L:18827897-18827956 6 Cat FBtr0075058 18827897 18828188 ATTCGA 6mer3-8 dme-miR-986-5p 3L + 18827876 18827957 stop_codon Cat FlyBase G23639.1 TGGCCAAGTCCTCGAAGTTCTAAGCTGAGCGAGCGGATTCGACGGATCAGACTTGGTTTTTGGCCTTAATTACGATTAATCC 8 18827935 0.980026058 7 8 53 1 1.113943352 0.230769231 0.5 0.692307692 8 0 0 13 3L:18827876-18827957 6 7 2729 FBgn0000261 825.6266667 49.71666667 75.31333333 0.008478408 0.140797855 0.09294503 -22 -23 -22.5 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 3L 18828832 18828838 - 3L_18828832_18828838_- 0.823349562 0.823349562 0.823349562 0 Indy FBtr0075083|FBtr0075082|FBtr0301857|FBtr0075081 18828630|18828630|18828630|18828630 18829222|18829222|18829222|18829222 3L - 18828819 18828936 3'utr Indy FlyBase G37950.1 ACTTAATTGTTGCATTTAGCATAAAAATGGAAAAGATTTGGAAAAGTTAGAACAGTTTGTTCAATGGCAGCCCTGGCCTGCTAATATTTTAAATAACTAGACTGAGAGAACTTACATA 32 18828839 0.9035187 12 32 185 1 1.591064607 0.051282051 0.1875 0.333333333 32 0 0 39 3L:18828819-18828936 7 Indy FBtr0075083|FBtr0075082|FBtr0301857|FBtr0075081 18828630|18828630|18828630|18828630 18829222|18829222|18829222|18829222 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 18828796 18828892 3'utr Indy FlyBase G28680.1 AGTTAGAACAGTTTGTTCAATGGCAGCCCTGGCCTGCTAATATTTTAAATAACTAGACTGAGAGAACTTACATATTCATACATGTTTTTCAACTTGT 22 18828840 0.972444983 8 19 127 0.891891892 1.217483944 0.108108108 0.409090909 0.648648649 22 3 1 33 3L:18828796-18828892 7 17.5 2730 FBgn0036816 1686.326667 80.33666667 123.0166667 0.010377586 0.217833285 0.142257147 1 2 1.5 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 3L 18829118 18829123 - 3L_18829118_18829123_- 1 1 1 0 Indy FBtr0075083|FBtr0075082|FBtr0301857|FBtr0075081 18828630|18828630|18828630|18828630 18829222|18829222|18829222|18829222 3L - 18828943 18829233 stop_codon Indy FlyBase G37951.1 AGACGCACTAGATAGTTAGTAATTAGTGTAAATAACTAACATACCCGTCACAGCGATAAAGTTGAGGAAAATTTAGGGAATTTTAAACGAAAAGTGCCTTTGCTGACAGCGAAAAATGTGAAAAATATTTAACTATGTATACTTGCATTTCAGAGTTGCGAAAAGTTTTGATACAAAAGCATTACCTACTGTTTAGAAAAATGTGTTAAAAAAAAAACGTATCGCAATATACTGTTAATCAGGAATTGAACACCTGGTCTACGCACTCAGCTAAATATTTAAATACAAATT 84 18829133 0.969581529 27 83 450 0.99047619 2.017033339 0.085714286 0.178571429 0.342857143 84 1 0 104 3L:18828943-18829233 6 Indy FBtr0075083|FBtr0075082|FBtr0301857|FBtr0075081 18828630|18828630|18828630|18828630 18829222|18829222|18829222|18829222 GAAAAA 6mer3-8 dme-miR-980-5p 3L - 18829100 18829159 3'utr Indy FlyBase G28682.1 AGGGAATTTTAAACGAAAAGTGCCTTTGCTGACAGCGAAAAATGTGAAAAATATTTAACT 39 18829133 0.895405702 7 36 181 0.966101695 1.45484486 0.06779661 0.333333333 0.559322034 39 1 1 57 3L:18829100-18829159 6 23 2731 FBgn0036816 1686.326667 80.33666667 123.0166667 0.013639113 0.286295174 0.186966536 10 10 10 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3L 188462 188468 - 3L_188462_188468_- 0.521223645 0.521223855 0.52122375 2.12E-07 rno FBtr0305549|FBtr0305548|FBtr0072532 187205|187984|187205 188548|188548|188548 3L - 188440 188505 3'utr rno FlyBase G32810.1 ACTTCGTTCATTCAAGCTTTCGATAATCCCCTCCCTTTGTGATTTGGTTCCTTGCCCTCGCCCCTA 66 188462 0.616170575 12 63 616 0.960526316 1.562292864 0.105263158 0.121212121 0.236842105 66 2 1 73 3L:188440-188505 7 rno FBtr0072532|FBtr0305549|FBtr0305548 187205|187205|187984 188548|188548|188548 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 188445 188496 3'utr rno FlyBase G24812.1 ATTCAAGCTTTCGATAATCCCCTCCCTTTGTGATTTGGTTCCTTGCCCTCGC 40 188469 0.796783624 8 37 363 0.915254237 1.033423755 0.016949153 0.375 0.576271186 40 1 4 54 3L:188445-188496 7 47.5 2732 FBgn0035106 2909.993333 29.82333333 45.86333333 0.016323061 1.592712641 1.035685733 -6 1 -2.5 0.01 dme-miR-932-5p 6mer2-7 GAATTG 3L 18877959 18877964 + 3L_18877959_18877964_+ 1 1 1 0 Ugt FBtr0075064 18877778 18878245 3L + 18877936 18877972 3'utr Ugt FlyBase G31284.1 AAGAAAACAGCTCACTAAAGTCTGAATTGTGTTTTGT 16 18877950 0.834634529 5 16 101 1 1.301029996 0.35 0.25 0.4 16 0 0 20 3L:18877936-18877972 6 Ugt FBtr0075064 18877778 18878245 GAATTG 6mer2-7 dme-miR-932-5p 3L + 18877933 18877965 3'utr Ugt FlyBase G23659.1 AAAAAGAAAACAGCTCACTAAAGTCTGAATTGT 7 18877951 0.965115805 4 7 35 1 1 0.4 0.285714286 0.5 7 0 0 10 3L:18877933-18877965 6 11.5 2733 FBgn0014075 2195.993333 49.69 76.23666667 0.00523681 0.231434896 0.15084605 9 8 8.5 0.01 dme-miR-980-3p 6mer3-8 GGCAGC 3L 18878829 18878834 - 3L_18878829_18878834_- 1 1 1 0 CG3961 FBtr0333712|FBtr0302322|FBtr0075078|FBtr0075077 18878248|18878651|18878248|18878248 18879086|18879086|18879086|18879086 3L - 18878775 18879064 3'utr CG3961 FlyBase G37968.1 AGACATCAACAACGAATCGAACTCAAGAAACTGGGAAGCATTCATTCAAATATGCCTATACCATTTTAAACTGATGATAACAAAGACTACAGATACAGATACGAAAGCGAACTGTCTAATTTTGTAGTATCGTCAATTCTTAGCACGTAAGAGGAGCGCAAGATACACCAGATACAGATACAATACACATAAAATATACACAACTTCAAACTGACAAGGAGAATCCTTTTGGCAGCCGCATTTTTTTATATAATTTAACCGAGAAGCGAACCTTAATTAATATATTAACT 233 18878835 0.966440359 39 217 1163 0.931899642 1.373580663 0.193548387 0.175965665 0.311827957 233 9 10 260 3L:18878775-18879064 6 CG3961 FBtr0075078|FBtr0075077|FBtr0333712|FBtr0302322 18878248|18878248|18878248|18878651 18879086|18879086|18879086|18879086 GGCAGC 6mer3-8 dme-miR-980-3p 3L - 18878821 18878874 3'utr CG3961 FlyBase G28697.1 AAAATATACACAACTTCAAACTGACAAGGAGAATCCTTTTGGCAGCCGCATTTT 54 18878836 0.712718692 8 51 259 0.941176471 1.204119983 0.258823529 0.425925926 0.635294118 54 1 4 80 3L:18878821-18878874 6 58.5 2734 FBgn0036821 610.73 21.53333333 32.27333333 0.095787009 2.716718266 1.812642016 1 2 1.5 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 3L 18900774 18900779 - 3L_18900774_18900779_- 0.999999239 0.999999999 0.999999619 5.66E-07 arx FBtr0075075 18900593 18900900 3L - 18900766 18900789 3'utr arx FlyBase G37998.1 TAAAATTAACATGTGCTGTGAAAC 8 18900778 0.723892102 2 7 43 0.833333333 1 0 0.375 0.583333333 8 2 0 10 3L:18900766-18900789 6 arx FBtr0075075 18900593 18900900 ATGTGC 6mer3-8 dme-miR-305-3p 3L - 18900764 18900788 3'utr arx FlyBase G28727.1 AAAATTAACATGTGCTGTGAAACAA 7 18900779 0.703538993 3 7 35 1 1.079181246 0 0.571428571 0.75 7 0 0 12 3L:18900764-18900788 6 7.5 2735 FBgn0036826 465.3333333 66.11666667 101.5966667 0.016117479 0.113435846 0.07382132 -1 0 -0.5 0.01 dme-miR-34-5p 8mer-A1 CACTGCCA 3L 18900869 18900876 - 3L_18900869_18900876_- 0.653365142 0.678397025 0.665881083 0.017700226 arx FBtr0075075 18900593 18900900 3L - 18900848 18900890 3'utr arx FlyBase G37999.1 TCAAGAATTACTCCCACTGCCAAAGAACAAAAACCAAAACATT 68 18900873 0.934896065 4 62 176 0.91025641 1.550228353 0.051282051 0.132352941 0.243589744 68 6 1 71 3L:18900848-18900890 8 arx FBtr0075075 18900593 18900900 CACTGCCA 8mer-A1 dme-miR-34-5p 3L - 18900849 18900888 3'utr arx FlyBase G28728.1 AAGAATTACTCCCACTGCCAAAGAACAAAAACCAAAACAT 73 18900873 0.915534299 4 73 175 1 2.021189299 0.057142857 0.356164384 0.552380952 73 0 0 105 3L:18900849-18900888 8 70.5 2736 FBgn0036826 465.3333333 66.11666667 101.5966667 0.151504298 1.06629695 0.693920404 -3 -3 -3 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 18990071 18990076 - 3L_18990071_18990076_- 1 1 1 0 CG18135 FBtr0075045|FBtr0075043|FBtr0075044|FBtr0332651|FBtr0075042 18990024|18990024|18990024|18990024|18990024 18990826|18990826|18990826|18990826|18990826 3L - 18990049 18990091 3'utr CG18135 FlyBase G38010.1 AGTTTTATGACAAAAACCAAAAGTGATTGATTCGTATGTAAAT 10 18990064 0.946240703 2 9 47 1 1.113943352 0 0.2 0.384615385 10 0 0 13 3L:18990049-18990091 6 CG18135 FBtr0075045|FBtr0075042|FBtr0332651|FBtr0075044|FBtr0075043 18990024|18990024|18990024|18990024|18990024 18990826|18990826|18990826|18990826|18990826 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 18990043 18990084 3'utr CG18135 FlyBase G28740.1 TGACAAAAACCAAAAGTGATTGATTCGTATGTAAATAAAATC 9 18990064 0.816459423 2 9 44 1 1.113943352 0 0.222222222 0.461538462 9 0 0 13 3L:18990043-18990084 6 8.5 2737 FBgn0036837 188.8566667 7.11 10.49666667 0.045007678 1.195499297 0.809780883 -12 -12 -12 0.01 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 19003843 19003850 - 3L_19003843_19003850_- 0.643565469 0.643565469 0.643565469 0 nkd FBtr0075039|FBtr0332649|FBtr0332650 19003739|19003739|19003739 19004922|19005670|19004922 3L - 19003826 19003886 3'utr nkd FlyBase G38038.1 AAAAACAAAATGCATTTAACTCTTATTTACATAAAAAAGACTGATTTCCAATTAAACAATA 12 19003842 0.972362984 7 12 66 1 1.204119983 0 0.25 0.4375 12 0 0 16 3L:19003826-19003886 8 nkd FBtr0332649|FBtr0332650|FBtr0075039 19003739|19003739|19003739 19005670|19004922|19004922 AAGACTGA 8mer-A1 dme-miR-14-3p 3L - 19003827 19003869 3'utr nkd FlyBase G28758.1 AACTCTTATTTACATAAAAAAGACTGATTTCCAATTAAACAAT 11 19003842 0.583894125 4 9 64 0.904761905 1.278753601 0.047619048 0.545454545 0.761904762 11 2 0 19 3L:19003827-19003869 8 9.5 2738 FBgn0002945 3.333333333 0.083333333 0.136666667 2.85 114 69.51219512 -8 -8 -8 0.01 dme-miR-14-3p 6mer2-7 AGACTG 3L 19059629 19059634 - 3L_19059629_19059634_- 1 1 1 0 CG3797 FBtr0332648 19059398 19060274 3L - 19059590 19059669 3'utr CG3797 FlyBase G38041.1 TAAAAAGACAAAGCTTGATAGAAACACAAGCGCTTAGACTGCAATTGTTCAGCTCAAAAAAGCAACTGAGTATTGATAAA 100 19059636 0.960150433 6 99 488 1 2.08278537 0.05785124 0.17 0.314049587 100 0 0 121 3L:19059590-19059669 6 CG3797 FBtr0332648 19059398 19060274 AGACTG 6mer2-7 dme-miR-14-3p 3L - 19059610 19059651 3'utr CG3797 FlyBase G28760.1 TAGAAACACAAGCGCTTAGACTGCAATTGTTCAGCTCAAAAA 51 19059636 0.953204497 2 49 226 0.957446809 1.477121255 0.085106383 0.568627451 0.765957447 51 2 2 90 3L:19059610-19059651 6 73.5 2739 FBgn0036842 550.5966667 23.31333333 35.34666667 0.133491546 3.152702316 2.079403998 2 2 2 0.01 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 19059690 19059697 - 3L_19059690_19059697_- 0.643565469 0.643565469 0.643565469 0 CG3797 FBtr0332648 19059398 19060274 3L - 19059676 19059733 3'utr CG3797 FlyBase G38042.1 TTTACAGCTATTTCATTCAATTAATATTTCAATTCAAAGACTGACAACACCTTTCGTA 19 19059701 0.694787016 7 14 130 0.739130435 0.62838893 0 0.210526316 0.347826087 19 3 3 17 3L:19059676-19059733 8 CG3797 FBtr0332648 19059398 19060274 AAGACTGA 8mer-A1 dme-miR-14-3p 3L - 19059671 19059711 3'utr CG3797 FlyBase G28761.1 AATATTTCAATTCAAAGACTGACAACACCTTTCGTATGTTT 23 19059702 0.690026992 5 17 126 0.771428571 0.954242509 0 0.260869565 0.514285714 23 6 2 27 3L:19059671-19059711 8 19.5 2740 FBgn0036842 550.5966667 23.31333333 35.34666667 0.035416124 0.836431227 0.551678612 4 5 4.5 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3L 19059924 19059930 - 3L_19059924_19059930_- 0.521223855 0.521223855 0.521223855 0 CG3797 FBtr0332648|FBtr0075037 19059398|19059770 19060274|19060274 3L - 19059887 19060009 3'utr CG3797 FlyBase G38044.1 CGCATCTATAATCCGTGTCACAAAATCGATCCACCATGCCTATATAAACCTATACATAAAAATATCGTCTAGTGTTAAGTGTGATTTTTTGTTAATACATGTGGTTTTATATTTCGATAAGTT 37 19059924 0.990410344 14 36 366 0.962264151 1.230448921 0.075471698 0.27027027 0.490566038 37 0 2 51 3L:19059887-19060009 7 CG3797 FBtr0332648|FBtr0075037 19059398|19059770 19060274|19060274 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 19059841 19059968 3'utr CG3797 FlyBase G28763.1 ATATAAACCTATACATAAAAATATCGTCTAGTGTTAAGTGTGATTTTTTGTTAATACATGTGGTTTTATATTTCGATAAGTTTTAAAATTTATAAATTGTATATATCTTGAATATTTGTATTGTGTGT 24 19059924 0.990618135 13 24 247 1 1.591064607 0.179487179 0.5 0.692307692 24 0 0 39 3L:19059841-19059968 7 18.5 2741 FBgn0036842 550.5966667 23.31333333 35.34666667 0.033599913 0.793537318 0.523387401 -6 -6 -6 0.01 dme-bantam-3p 6mer2-7 GATCTC 3L 19060076 19060081 - 3L_19060076_19060081_- 1 1 1 0 CG3797 FBtr0332648|FBtr0075037 19059398|19059770 19060274|19060274 3L - 19060066 19060091 3'utr CG3797 FlyBase G38046.1 GTTTCAACTAGATCTCTTAAAGATCC 8 19060075 0.754275183 3 8 57 1 1.079181246 0.583333333 0.375 0.583333333 8 0 0 12 3L:19060066-19060091 6 CG3797 FBtr0332648|FBtr0075037 19059398|19059770 19060274|19060274 GATCTC 6mer2-7 dme-bantam-3p 3L - 19060055 19060090 3'utr CG3797 FlyBase G28764.1 TTTCAACTAGATCTCTTAAAGATCCATTAAAGTTGC 6 19060075 0.980594347 4 6 50 1 0.77815125 0 0 0 6 0 0 6 3L:19060055-19060090 6 7 2742 FBgn0036842 550.5966667 23.31333333 35.34666667 0.012713481 0.300257363 0.198038476 -6 -6 -6 0.01 dme-miR-190-5p 6mer3-8 ACATAT 3L 19068591 19068596 - 3L_19068591_19068596_- 1 1 1 0 Mkp3 FBtr0075036|FBtr0333220|FBtr0075035|FBtr0330089 19067730|19066153|19068366|19067730 19068911|19068911|19068911|19068653 3L - 19068561 19068607 3'utr Mkp3 FlyBase G38058.1 AAACCACACATACATATGAGCCGCTTGTTAAATAGGGGTACGAATTC 21 19068591 0.759164796 6 20 119 1 1.380211242 0.125 0.095238095 0.208333333 21 0 0 24 3L:19068561-19068607 6 Mkp3 FBtr0075036|FBtr0333220|FBtr0075035|FBtr0330089 19067730|19066153|19068366|19067730 19068911|19068911|19068911|19068653 ACATAT 6mer3-8 dme-miR-190-5p 3L - 19068548 19068605 3'utr Mkp3 FlyBase G28771.1 ACCACACATACATATGAGCCGCTTGTTAAATAGGGGTACGAATTCAAACTTTAATAAA 18 19068591 0.973106554 4 18 110 1 1.491361694 0.032258065 0.5 0.709677419 18 0 0 31 3L:19068548-19068605 6 17.5 2743 FBgn0036844 2217.94 92.15 143.0633333 0.007890204 0.189907759 0.122323446 -5 -5 -5 0.01 dme-miR-1006-3p 6mer3-8 CGAATT 3L 19094676 19094681 + 3L_19094676_19094681_+ 1 1 1 0 MESR6 FBtr0075026|FBtr0330090 19094563|19094563 19094760|19094760 3L + 19094620 19094701 3'utr MESR6 FlyBase G31317.1 TACAAAACTCGTTTGGGCGGGAAAACTCCACGACTAAAAGATACCCGTAGTGATTTCGAATTAGAACCTAATGATGGAAAAT 57 19094674 0.77105135 7 55 303 0.955882353 1.335792102 0.294117647 0.157894737 0.294117647 57 1 2 65 3L:19094620-19094701 6 MESR6 FBtr0330090|FBtr0075026 19094563|19094563 19094760|19094760 CGAATT 6mer3-8 dme-miR-1006-3p 3L + 19094594 19094703 3'utr MESR6 FlyBase G23682.1 CGCCACTGCGAATTAGATTCTGAATTTACAAAACTCGTTTGGGCGGGAAAACTCCACGACTAAAAGATACCCGTAGTGATTTCGAATTAGAACCTAATGATGGAAAATCC 34 19094674 0.97297931 10 32 187 0.93877551 1.662757832 0.326530612 0.352941176 0.551020408 34 3 0 46 3L:19094594-19094703 6 31.5 2744 FBgn0036846 174.09 12.22333333 18.78 0.180940893 2.577038451 1.677316294 2 2 2 0.01 dme-bantam-3p 6mer3-8 TGATCT 3L 19095299 19095304 - 3L_19095299_19095304_- 1 1 1 0 CG11577 FBtr0075034 19094888 19095476 3L - 19095099 19095363 3'utr CG11577 FlyBase G38068.1 TAGTTTTTGAATGAACTCAAGCATTGACAAACTAAATGTAGTAGTTACTTAAATTCCAATGATCTTACTTTTTTTCGAAATGGAAATCATTTTAAGTTTTACCACCTATAGAACAAAGCGAAAAGTGTTTAATTAGCTTAAGTGAACTCACTATGTCTCTCAAGCTAATCTGTATAACTTCCACAACGACTGAGCCACAGAATGCTACTGAAAGTTTCGCCTGGGGCCATTGGCTTATTGATTTCGGCCACGAATTGGGGTCGAC 528 19095304 0.859162995 47 498 4850 0.951441578 1.952169501 0.059180577 0.181818182 0.344461305 528 26 6 627 3L:19095099-19095363 6 CG11577 FBtr0075034 19094888 19095476 TGATCT 6mer3-8 dme-bantam-3p 3L - 19095100 19095369 3'utr CG11577 FlyBase G28778.1 AAATTTTAGTTTTTGAATGAACTCAAGCATTGACAAACTAAATGTAGTAGTTACTTAAATTCCAATGATCTTACTTTTTTTCGAAATGGAAATCATTTTAAGTTTTACCACCTATAGAACAAAGCGAAAAGTGTTTAATTAGCTTAAGTGAACTCACTATGTCTCTCAAGCTAATCTGTATAACTTCCACAACGACTGAGCCACAGAATGCTACTGAAAGTTTCGCCTGGGGCCATTGGCTTATTGATTTCGGCCACGAATTGGGGTCGA 365 19095304 0.943204234 44 339 3358 0.931558935 2.088136089 0.034220532 0.320547945 0.52851711 365 33 3 490 3L:19095100-19095369 6 298 2745 FBgn0036847 488.3333333 44.84333333 68.4 0.610238908 6.645357913 4.356725146 0 0 0 0.01 dme-miR-999-3p 6mer2-7 GTTAAC 3L 19099421 19099426 - 3L_19099421_19099426_- 1 1 1 0 Gem2 FBtr0330093|FBtr0075032 19099121|19099121 19099480|19099480 3L - 19099390 19099452 3'utr Gem2 FlyBase G38079.1 AATTTAAGCGCAAATTCGACTATTTTGTTAACTAAAAAGCCAAAAGCTACGCTGGTAATTTTG 14 19099427 0.980144609 8 13 96 0.941176471 0.903089987 0.058823529 0.214285714 0.352941176 14 0 1 16 3L:19099390-19099452 6 Gem2 FBtr0330093|FBtr0075032 19099121|19099121 19099480|19099480 GTTAAC 6mer2-7 dme-miR-999-3p 3L - 19099390 19099447 3'utr Gem2 FlyBase G28787.1 AAGCGCAAATTCGACTATTTTGTTAACTAAAAAGCCAAAAGCTACGCTGGTAATTTTG 14 19099427 0.689386233 8 14 96 1 1.301029996 0.1 0.428571429 0.6 14 0 0 20 3L:19099390-19099447 6 10 2746 FBgn0036850 154 17.00333333 26.24666667 0.064935065 0.588119976 0.381000762 1 1 1 0.01 dme-miR-283-5p 6mer3-8 TGATAT 3L 19257484 19257489 - 3L_19257484_19257489_- 1 1 1 0 nes FBtr0075021|FBtr0075019 19257410|19257280 19258010|19258010 3L - 19257475 19257584 3'utr nes FlyBase G38091.1 ATTTCATTTATTGAAAGGGGAGCAGCGCTCAAGGAGACTAACTAAGCCATAAAGACAGTTTTATACCAATGTAAAGATGATGCGACGATATATTTTGATATGCTCACGCT 39 19257494 0.988591338 13 29 270 0.745098039 1.579783597 0.137254902 0.282051282 0.450980392 39 13 0 38 3L:19257475-19257584 6 nes FBtr0075021|FBtr0075019 19257410|19257280 19258010|19258010 TGATAT 6mer3-8 dme-miR-283-5p 3L - 19257475 19257613 3'utr nes FlyBase G28798.1 ACACCAGGGTCTTTGAAAATCAAACTCAAATTTCATTTATTGAAAGGGGAGCAGCGCTCAAGGAGACTAACTAAGCCATAAAGACAGTTTTATACCAATGTAAAGATGATGCGACGATATATTTTGATATGCTCACGCT 33 19257493 0.986122897 13 29 241 0.906976744 1.591064607 0.186046512 0.242424242 0.418604651 33 4 0 39 3L:19257475-19257613 6 21.5 2747 FBgn0026630 1182.346667 63.70333333 97.51666667 0.018184176 0.337501962 0.220475132 5 4 4.5 0.01 dme-miR-932-5p 7mer-m8 GGAATTG 3L 19257685 19257691 - 3L_19257685_19257691_- 0.702972867 0.70297287 0.702972869 0 nes FBtr0075021|FBtr0075019 19257410|19257280 19258010|19258010 3L - 19257609 19257837 3'utr nes FlyBase G38092.1 ACTTTGAACATATATATATATTGTCTGCCTAGTCAAGGTGGAGTCATCCCCTAGTATGCAGTGTGGATTTTGGCGATAAGATATTGTTTTATCTTGCCTAAGAACACATTCTCAGTCGTATATATATATATATATATAAACATTATGGAATTGTAAATTGTATAAGAGTATAAACCCGTTGAGTTCATCTAGGAACTAGACAGATCACTCGAGACTATAACGATACACC 58 19257692 0.906058157 26 52 435 0.910447761 1.785329835 0.074626866 0.120689655 0.23880597 58 6 0 61 3L:19257609-19257837 7 nes FBtr0075021|FBtr0075019 19257410|19257280 19258010|19258010 GGAATTG 7mer-m8 dme-miR-932-5p 3L - 19257670 19257737 3'utr nes FlyBase G28799.1 AGAACACATTCTCAGTCGTATATATATATATATATATAAACATTATGGAATTGTAAATTGTATAAGAG 12 19257693 0.918960326 5 9 101 0.833333333 1.176091259 0 0.416666667 0.611111111 12 3 0 15 3L:19257670-19257737 7 6 2748 FBgn0026630 1182.346667 63.70333333 97.51666667 0.005074654 0.094186594 0.061527944 1 2 1.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3L 19257803 19257809 - 3L_19257803_19257809_- 0.823349562 0.823349562 0.823349562 0 nes FBtr0075021|FBtr0075019 19257410|19257280 19258010|19258010 3L - 19257609 19257837 3'utr nes FlyBase G38092.1 ACTTTGAACATATATATATATTGTCTGCCTAGTCAAGGTGGAGTCATCCCCTAGTATGCAGTGTGGATTTTGGCGATAAGATATTGTTTTATCTTGCCTAAGAACACATTCTCAGTCGTATATATATATATATATATAAACATTATGGAATTGTAAATTGTATAAGAGTATAAACCCGTTGAGTTCATCTAGGAACTAGACAGATCACTCGAGACTATAACGATACACC 58 19257814 0.906058157 26 52 435 0.910447761 1.785329835 0.074626866 0.120689655 0.23880597 58 6 0 61 3L:19257609-19257837 7 nes FBtr0075021|FBtr0075019 19257410|19257280 19258010|19258010 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L - 19257761 19257826 3'utr nes FlyBase G28800.1 ATATATATATTGTCTGCCTAGTCAAGGTGGAGTCATCCCCTAGTATGCAGTGTGGATTTTGGCGAT 14 19257813 0.979150593 6 13 94 1 1.278753601 0.315789474 0.214285714 0.421052632 14 0 0 19 3L:19257761-19257826 7 19.5 2749 FBgn0026630 1182.346667 63.70333333 97.51666667 0.016492625 0.306106431 0.199965818 5 4 4.5 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT 3L 19262646 19262651 - 3L_19262646_19262651_- 1 1 1 0 Max FBtr0345391|FBtr0075018 19262230|19262524 19262875|19262875 3L - 19262542 19262672 3'utr Max FlyBase G38104.1 CCGATAATCATAATCATCATTAGCTGTAAGCCCAAAATGTAACCCACCCAATCGACCTTAATTTGTATGCGTGCGTCTTTTCTACTTTCAACAAATTGTCACTCTGTGCGCAAAGAATAAAGTAAACTAGT 33 19262653 0.976903271 16 29 215 0.925 1.267171728 0.125 0.181818182 0.325 33 2 1 37 3L:19262542-19262672 6 Max FBtr0345391|FBtr0075018 19262230|19262524 19262875|19262875 AGCTGT 6mer3-8 dme-miR-1008-3p 3L - 19262613 19262672 3'utr Max FlyBase G28808.1 CCGATAATCATAATCATCATTAGCTGTAAGCCCAAAATGTAACCCACCCAATCGACCTTA 13 19262662 0.985424886 3 9 62 0.727272727 0.726998728 0.318181818 0.692307692 0.818181818 13 4 2 16 3L:19262613-19262672 6 12 2750 FBgn0017578 482.9933333 60.31 92.42333333 0.024845063 0.198971978 0.129837343 2 11 6.5 0.01 dme-miR-7-5p 6mer2-7 TCTTCC 3L 19266747 19266752 - 3L_19266747_19266752_- 1 1 1 0 CG9629 FBtr0075017 19266471 19266836 3L - 19266719 19266761 3'utr CG9629 FlyBase G38111.1 TGATATAATTCTTCCTATTCCGTGCCGATTTCAAAGCGCCAGA 10 19266744 0.96534013 3 10 84 1 1.041392685 0 0.1 0.181818182 10 0 0 11 3L:19266719-19266761 6 CG9629 FBtr0075017 19266471 19266836 TCTTCC 6mer2-7 dme-miR-7-5p 3L - 19266730 19266755 3'utr CG9629 FlyBase G28811.1 AATTCTTCCTATTCCGTGCCGATTTC 5 19266744 0.707451638 2 5 42 1 0.903089987 0 0.6 0.75 5 0 0 8 3L:19266730-19266755 6 7 2751 FBgn0036857 368.37 21.64666667 32.97666667 0.019002633 0.323375423 0.212271303 -8 -8 -8 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 3L 19266809 19266814 - 3L_19266809_19266814_- 1 1 1 0 CG9629 FBtr0075017 19266471 19266836 3L - 19266779 19266828 3'utr CG9629 FlyBase G38112.1 TACGATCAATTTTAATGTGCTACAATTTACAATACTATTACATATAATGT 14 19266813 0.785005521 2 13 125 0.941176471 1.204119983 0.058823529 0.214285714 0.352941176 14 1 0 16 3L:19266779-19266828 6 CG9629 FBtr0075017 19266471 19266836 ATGTGC 6mer3-8 dme-miR-305-3p 3L - 19266757 19266826 3'utr CG9629 FlyBase G28812.1 CGATCAATTTTAATGTGCTACAATTTACAATACTATTACATATAATGTCCAAAACTAAATGCAACTGATA 15 19266813 0.9873988 5 15 127 1 1.278753601 0.210526316 0.2 0.368421053 15 0 0 19 3L:19266757-19266826 6 11.5 2752 FBgn0036857 368.37 21.64666667 32.97666667 0.031218612 0.531259624 0.348731426 -1 -1 -1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3L 19282573 19282579 - 3L_19282573_19282579_- 0.823349562 0.823349562 0.823349562 0 Gbs-76A FBtr0332155|FBtr0345390|FBtr0075014|FBtr0331425 19281926|19281362|19281926|19281926 19283222|19283222|19283222|19283222 3L - 19282542 19282595 3'utr Gbs-76A FlyBase G38123.1 AAGGTTCGAATGAATCCCAAAGATAGTTGTTAGTCGTATGTTATAAGAAGAGCA 43 19282581 0.952838037 10 33 345 0.755555556 1.230448921 0.355555556 0.046511628 0.088888889 43 10 1 34 3L:19282542-19282595 7 Gbs-76A FBtr0331425|FBtr0075014|FBtr0345390|FBtr0332155 19281926|19281926|19281362|19281926 19283222|19283222|19283222|19283222 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 19282525 19282599 3'utr Gbs-76A FlyBase G28818.1 CAGCAAGGTTCGAATGAATCCCAAAGATAGTTGTTAGTCGTATGTTATAAGAAGAGCAAGTGATAACAAACTAAA 23 19282581 0.98783679 5 21 186 0.80952381 1.531478917 0.30952381 0.565217391 0.761904762 23 8 0 34 3L:19282525-19282599 7 28 2753 FBgn0036862 172.6666667 4.483333333 6.786666667 0.162162162 6.24535316 4.125736739 2 2 2 0.01 dme-miR-12-5p 7mer-m8 AATACTC 3L 19298458 19298464 + 3L_19298458_19298464_+ 0.67451515 0.67451515 0.67451515 0 fal FBtr0321324|FBtr0347258|FBtr0290284 19298343|19298343|19298343 19298830|19298830|19298830 3L + 19298387 19298507 3'utr fal FlyBase G31345.1 ACGTATGTTATTGTTTCCATTCGCTTCGTTTTCTTATATTTAATAAACTATATTTCATAAAAAGATGTACAAATACTCCAACGGTTGCGTTCGTAGTGCGGCCATTCTTATTGCCATTTAC 55 19298471 0.967152928 10 54 407 0.984126984 1.792391689 0.222222222 0.145454545 0.253968254 55 1 0 62 3L:19298387-19298507 7 fal FBtr0290284|FBtr0321324|FBtr0347258 19298343|19298343|19298343 19298830|19298830|19298830 AATACTC 7mer-m8 dme-miR-12-5p 3L + 19298444 19298505 3'utr fal FlyBase G23701.1 TAAAAAGATGTACAAATACTCCAACGGTTGCGTTCGTAGTGCGGCCATTCTTATTGCCATTT 27 19298471 0.975556022 5 26 171 0.97826087 1.653212514 0.543478261 0.444444444 0.673913043 27 1 0 45 3L:19298444-19298505 7 33 2754 FBgn0028380 346.6733333 21.81333333 33.39 0.095190477 1.512836186 0.988319856 -13 -13 -13 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3L 19450059 19450064 + 3L_19450059_19450064_+ 1 1 1 0 Chd3 FBtr0074998 19449926 19450238 3L + 19450038 19450069 3'utr Chd3 FlyBase G31352.1 AATATATAGTTATTTTGCTCCAAGACTTCACT 5 19450053 0.982416941 4 4 41 0.888888889 0.903089987 0 0.4 0.666666667 5 1 0 8 3L:19450038-19450069 6 Chd3 FBtr0074998 19449926 19450238 AAGACT 6mer3-8 dme-miR-14-3p 3L + 19450038 19450070 3'utr Chd3 FlyBase G23707.1 AATATATAGTTATTTTGCTCCAAGACTTCACTA 7 19450052 0.649954712 3 7 55 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 3L:19450038-19450070 6 6 2755 FBgn0023395 212.48 8.483333333 13.1 0.028237952 0.707269155 0.458015267 6 7 6.5 0.01 dme-miR-318-3p 6mer3-8 CCCAGT 3L 19450132 19450137 + 3L_19450132_19450137_+ 1 1 1 0 Chd3 FBtr0074998 19449926 19450238 3L + 19450096 19450148 3'utr Chd3 FlyBase G31353.1 ACTATTACTTTTTTGTTCGACTGTAACAATTTTTCGCCCAGTAAATATTCTAT 14 19450128 0.751318797 5 14 132 1 1.255272505 0 0.142857143 0.333333333 14 0 0 18 3L:19450096-19450148 6 Chd3 FBtr0074998 19449926 19450238 CCCAGT 6mer3-8 dme-miR-318-3p 3L + 19450084 19450144 3'utr Chd3 FlyBase G23708.1 AGTAATAGCAGTACTATTACTTTTTTGTTCGACTGTAACAATTTTTCGCCCAGTAAATATT 14 19450128 0.987237627 5 12 110 0.95 1.278753601 0.05 0.285714286 0.5 14 1 0 19 3L:19450084-19450144 6 9.5 2756 FBgn0023395 212.48 8.483333333 13.1 0.04471009 1.119842829 0.72519084 4 4 4 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 1950373 1950378 - 3L_1950373_1950378_- 1 1 1 0 mv FBtr0304060 1950304 1950578 3L - 1950355 1950426 3'utr mv FlyBase G33597.1 AAGATTCCTAGGCTTAGGTCTCATAGAGCTGTAAAATACACCTTTTGTACCAAAACTTTATATTATTATTAC 12 1950381 0.982084297 4 12 95 1 1.113943352 0 0.083333333 0.153846154 12 0 0 13 3L:1950355-1950426 6 mv FBtr0304060 1950304 1950578 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 1950357 1950423 3'utr mv FlyBase G25406.1 ATTCCTAGGCTTAGGTCTCATAGAGCTGTAAAATACACCTTTTGTACCAAAACTTTATATTATTATT 9 1950381 0.965160699 5 9 67 1 1.113943352 0.076923077 0.444444444 0.615384615 9 0 0 13 3L:1950357-1950423 6 7 2757 FBgn0265988 597.23 6.253333333 9.486666667 0.011720778 1.119402985 0.737877723 3 3 3 0.01 dme-miR-986-5p 6mer3-8 ATTCGA 3L 19544414 19544419 - 3L_19544414_19544419_- 1 1 1 0 l(3)76BDr FBtr0074974 19544343 19544481 3L - 19544370 19544425 3'utr l(3)76BDr FlyBase G38145.1 CAAACCATTCGATATAGGAAATAGTTTCAGGTCTCACAAATTGTAAATCAGCAATA 18 19544400 0.753992276 6 14 127 0.777777778 1.146128036 0.388888889 0 0 18 4 0 14 3L:19544370-19544425 6 l(3)76BDr FBtr0074974 19544343 19544481 ATTCGA 6mer3-8 dme-miR-986-5p 3L - 19544361 19544461 3'utr l(3)76BDr FlyBase G28827.1 CAATTTTAGCAACACGTATTGAGCAAAAGGCACAACCAAACCATTCGATATAGGAAATAGTTTCAGGTCTCACAAATTGTAAATCAGCAATATTAATAAAT 11 19544400 0.971618769 7 11 64 1 1.255272505 0.111111111 0.454545455 0.666666667 11 0 0 18 3L:19544361-19544461 6 5.5 2758 FBgn0262517 1062.48 23.59666667 36.06 0.005176568 0.233083769 0.152523572 -19 -19 -19 0.01 dme-miR-283-5p 8mer-m1 TGATATTT 3L 19585131 19585138 - 3L_19585131_19585138_- 0.555593841 0.555593841 0.555593841 0 CG9231 FBtr0074972|FBtr0344994 19585091|19585091 19585473|19585473 3L - 19585103 19585150 3'utr CG9231 FlyBase G38172.1 ATAGATATTCAGTGATATTTGTAATGTTGTATTATCAAAAATAAAACA 17 19585143 0.98674877 8 14 145 0.85 0.753327667 0.05 0.176470588 0.3 17 1 2 17 3L:19585103-19585150 8 CG9231 FBtr0074972|FBtr0344994 19585091|19585091 19585473|19585473 TGATATTT 8mer-m1 dme-miR-283-5p 3L - 19585118 19585150 3'utr CG9231 FlyBase G28850.1 ATAGATATTCAGTGATATTTGTAATGTTGTATT 7 19585143 0.957875442 3 7 63 1 1.079181246 0 0.428571429 0.666666667 7 0 0 12 3L:19585118-19585150 8 10.5 2759 FBgn0036887 129 20.06333333 30.59 0.081395349 0.523342748 0.343249428 5 5 5 0.01 dme-miR-2b-2-5p 6mer2-7 TGAAGA 3L 19585346 19585351 - 3L_19585346_19585351_- 1 1 1 0 CG9231 FBtr0074972|FBtr0344994 19585091|19585091 19585473|19585473 3L - 19585320 19585369 3'utr CG9231 FlyBase G38173.1 GCTAATAATCAGTTGGTCTGAAGATTGTTGAAAATTTTTCTTTTTAAATT 13 19585356 0.966359523 5 12 100 1 1.146128036 0.214285714 0.076923077 0.142857143 13 0 0 14 3L:19585320-19585369 6 CG9231 FBtr0074972|FBtr0344994 19585091|19585091 19585473|19585473 TGAAGA 6mer2-7 dme-miR-2b-2-5p 3L - 19585331 19585396 3'utr CG9231 FlyBase G28851.1 TGGCTAAAACTGGCCTTAAAAGATTTTGCTAATAATCAGTTGGTCTGAAGATTGTTGAAAATTTTT 6 19585344 0.987402485 5 5 36 1 1 0.1 0.5 0.7 6 0 0 10 3L:19585331-19585396 6 7.5 2760 FBgn0036887 129 20.06333333 30.59 0.058139535 0.373816249 0.245178163 5 -7 -1 0.01 dme-miR-277-3p 6mer3-8 TGCATT 3L 19590925 19590930 - 3L_19590925_19590930_- 1 1 1 0 ash1 FBtr0306010|FBtr0306009 19590771|19590771 19591301|19591301 3L - 19590912 19590976 3'utr ash1 FlyBase G38179.1 CAAAACTATCCCCCTCTCGTCTTTGCAATTGAAGGCGTTTGACTTTTGCATTGTTATTTTAAATT 46 19590931 0.776344362 12 45 362 0.984615385 1.505149978 0.061538462 0.326086957 0.523076923 46 0 1 64 3L:19590912-19590976 6 ash1 FBtr0306010|FBtr0306009 19590771|19590771 19591301|19591301 TGCATT 6mer3-8 dme-miR-277-3p 3L - 19590911 19590975 3'utr ash1 FlyBase G28856.1 AAAACTATCCCCCTCTCGTCTTTGCAATTGAAGGCGTTTGACTTTTGCATTGTTATTTTAAATTA 35 19590931 0.738578334 7 35 283 1 1.698970004 0.08 0.285714286 0.5 35 0 0 50 3L:19590911-19590975 6 35.5 2761 FBgn0005386 720.8833333 11.4 17.44333333 0.049245139 3.114035088 2.035161475 1 1 1 0.01 dme-miR-282-5p 6mer3-8 AGAGGC 3L 19591250 19591255 - 3L_19591250_19591255_- 1 1 1 0 ash1 FBtr0306010|FBtr0306009 19590771|19590771 19591301|19591301 3L - 19591219 19591308 stop_codon ash1 FlyBase G38181.1 AACATAACCGATGTAACGCGAGTAGATTAAGCCGTGTATATACGCCTAAAGTTAGAGGCATTGATTAATATTTATGGAACTTCAATTAAC 24 19591256 0.976446475 8 24 156 1 1.447158031 0.142857143 0.166666667 0.285714286 24 0 0 28 3L:19591219-19591308 6 ash1 FBtr0306010|FBtr0306009 19590771|19590771 19591301|19591301 AGAGGC 6mer3-8 dme-miR-282-5p 3L - 19591243 19591275 3'utr ash1 FlyBase G28858.1 GTGTATATACGCCTAAAGTTAGAGGCATTGATT 12 19591256 0.78400722 5 11 82 0.909090909 1.301029996 0.181818182 0.416666667 0.681818182 12 2 0 20 3L:19591243-19591275 6 15 2762 FBgn0005386 720.8833333 11.4 17.44333333 0.020807805 1.315789474 0.859927384 1 1 1 0.01 dme-miR-277-3p 6mer2-7 GCATTT 3L 19608338 19608343 - 3L_19608338_19608343_- 1 1 1 0 Lon FBtr0273410|FBtr0074967 19607855|19607855 19608425|19608425 3L - 19608288 19608355 3'utr Lon FlyBase G38198.1 ATTTAGACCATAGCATTTGTTAATTCTAATGCCAAGTAAATTGAATGTACCATCGAACTGAAGACAGT 8 19608345 0.886335933 5 7 53 1 1.041392685 0.181818182 0.25 0.454545455 8 0 0 11 3L:19608288-19608355 6 Lon FBtr0273410|FBtr0074967 19607855|19607855 19608425|19608425 GCATTT 6mer2-7 dme-miR-277-3p 3L - 19608293 19608349 3'utr Lon FlyBase G28870.1 ACCATAGCATTTGTTAATTCTAATGCCAAGTAAATTGAATGTACCATCGAACTGAAG 9 19608326 0.944230637 5 8 52 0.916666667 0.740362689 0.166666667 0.333333333 0.5 9 0 1 11 3L:19608293-19608349 6 3 2763 FBgn0036892 886.7333333 28.81666667 44.24666667 0.003383204 0.10410642 0.067801718 2 -17 -7.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3L 19613357 19613364 + 3L_19613357_19613364_+ 0.63113665 0.63113665 0.63113665 0 CG9376 FBtr0074946 19613260 19613489 3L + 19613339 19613424 3'utr CG9376 FlyBase G31405.1 AACCACGTCATCATCCCGTCTAGTCAGCAGCTTAGGAACTACCAAAAAGCAATTACCACTTTAATGTTACATGTTTAATCATATTA 85 19613352 0.971182698 12 82 478 0.961538462 1.698970004 0.259615385 0.176470588 0.326923077 85 3 1 100 3L:19613339-19613424 8 CG9376 FBtr0074946 19613260 19613489 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L + 19613337 19613390 3'utr CG9376 FlyBase G23745.1 AGAACCACGTCATCATCCCGTCTAGTCAGCAGCTTAGGAACTACCAAAAAGCAA 51 19613352 0.939950201 8 46 277 0.902439024 1.568201724 0.182926829 0.450980392 0.658536585 51 7 1 74 3L:19613337-19613390 8 63 2764 FBgn0036893 103 12.34333333 18.84333333 0.611650485 5.103969754 3.343357509 5 5 5 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 3L 19624535 19624540 - 3L_19624535_19624540_- 1 1 1 0 wnd FBtr0074965|FBtr0074963|FBtr0074964 19624404|19624404|19624404 19625547|19625547|19625547 3L - 19624472 19624554 3'utr wnd FlyBase G38236.1 ACTAGTTGGATGTTTAGCTTCGTAAGATGTGTCGTTCCTTTGTGGGCGACGTTTCTCTACATTATGTAAATGTACTTCATATT 10 19624541 0.987436245 7 10 88 1 1.113943352 0.076923077 0.2 0.384615385 10 0 0 13 3L:19624472-19624554 6 wnd FBtr0074964|FBtr0074965|FBtr0074963 19624404|19624404|19624404 19625547|19625547|19625547 TAGCTT 6mer3-8 dme-miR-79-3p 3L - 19624494 19624555 3'utr wnd FlyBase G28897.1 CACTAGTTGGATGTTTAGCTTCGTAAGATGTGTCGTTCCTTTGTGGGCGACGTTTCTCTACA 6 19624540 0.984860413 5 6 46 1 0.954242509 0.444444444 0.5 0.666666667 6 0 0 9 3L:19624494-19624555 6 5 2765 FBgn0036896 311 9.553333333 14.51666667 0.01607717 0.52337753 0.344431688 1 0 0.5 0.01 dme-miR-1006-3p 6mer3-8 CGAATT 3L 19624624 19624629 - 3L_19624624_19624629_- 1 1 1 0 wnd FBtr0074965|FBtr0074963|FBtr0074964 19624404|19624404|19624404 19625547|19625547|19625547 3L - 19624626 19624671 3'utr wnd FlyBase G38237.1 AAATACGTTTCGCCCCTCTGGAAATCGTTCATCTGCTGCACACGAA 18 19624638 0.868260516 6 17 132 0.95 1.278753601 0.05 0.111111111 0.2 18 1 0 19 3L:19624626-19624671 3 wnd FBtr0074964|FBtr0074965|FBtr0074963 19624404|19624404|19624404 19625547|19625547|19625547 CGAATT 6mer3-8 dme-miR-1006-3p 3L - 19624581 19624667 3'utr wnd FlyBase G28898.1 ACGTTTCGCCCCTCTGGAAATCGTTCATCTGCTGCACACGAATTACAAATTTAATATTATTCTATATACACTCAATATATATATATA 17 19624638 0.980229686 9 17 125 1 1.397940009 0.04 0.352941176 0.56 17 0 0 25 3L:19624581-19624667 6 3.5 2766 FBgn0036896 311 9.553333333 14.51666667 0.011254019 0.366364271 0.241102181 9 9 9 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 3L 19625252 19625258 - 3L_19625252_19625258_- 0.620204266 0.620204266 0.620204266 0 wnd FBtr0074965|FBtr0074963|FBtr0074964 19624404|19624404|19624404 19625547|19625547|19625547 3L - 19625231 19625312 3'utr wnd FlyBase G38241.1 AAACCCTTTTGGGTTCTTTGGGGCGATCTTTGTCCGTGTCGTACTCGTATCGCATGCATTTCCTATTTTGCTAAATATAATT 23 19625258 0.989371264 11 23 235 1 1.397940009 0.2 0.086956522 0.16 23 0 0 25 3L:19625231-19625312 7 wnd FBtr0074964|FBtr0074965|FBtr0074963 19624404|19624404|19624404 19625547|19625547|19625547 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 19625236 19625312 3'utr wnd FlyBase G28901.1 AAACCCTTTTGGGTTCTTTGGGGCGATCTTTGTCCGTGTCGTACTCGTATCGCATGCATTTCCTATTTTGCTAAATA 15 19625258 0.900700155 9 15 156 1 1.431363764 0.185185185 0.533333333 0.740740741 15 0 0 27 3L:19625236-19625312 7 15 2767 FBgn0036896 311 9.553333333 14.51666667 0.048231511 1.570132589 1.033295063 0 0 0 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 19638706 19638711 - 3L_19638706_19638711_- 1 1 1 0 CG8786 FBtr0331862|FBtr0331862|FBtr0331862 19637205|19637205|19637205 19639572|19639572|19639572 3L - 19638688 19638774 5'utr CG8786 FlyBase G38261.1 CAGGGGAATCAGATGCAGTATTAATTATTAAGTCGCCGTGAAGTGCGTTAAACAAAAACATTTCTGTGACAGTTGAATATATTGATA 132 19638713 0.903648385 11 127 860 0.963414634 2.198657087 0.109756098 0.181818182 0.341463415 132 6 0 158 3L:19638688-19638774 6 CG8786 FBtr0331862|FBtr0331862|FBtr0331862 19637205|19637205|19637205 19639572|19639572|19639572 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 19638668 19638773 5'utr CG8786 FlyBase G28916.1 AGGGGAATCAGATGCAGTATTAATTATTAAGTCGCCGTGAAGTGCGTTAAACAAAAACATTTCTGTGACAGTTGAATATATTGATATTTTGTATACTCTAAGTTGC 73 19638713 0.922138269 11 70 511 0.95412844 2.017033339 0.110091743 0.328767123 0.550458716 73 5 0 104 3L:19638668-19638773 6 80 2768 FBgn0036897 334.61 15.00666667 22.97333333 0.239084307 5.330964016 3.482298317 2 2 2 0.01 dme-miR-999-3p 7mer-m8 AGTTAAC 3L 19639042 19639048 - 3L_19639042_19639048_- 0.674514267 0.674514267 0.674514267 0 CG8786 FBtr0331862 19637205 19639572 3L - 19639006 19639054 5'utr CG8786 FlyBase G38263.1 TCGGAAAGTTAACCCTCCCTATGGTCTCATTTGCAAGCTGGCAAAAGTA 464 19639033 0.668438147 6 451 3526 0.977346278 2.178976947 0.03236246 0.232758621 0.42394822 464 11 3 604 3L:19639006-19639054 7 CG8786 FBtr0331862 19637205 19639572 AGTTAAC 7mer-m8 dme-miR-999-3p 3L - 19639008 19639060 5'utr CG8786 FlyBase G28917.1 AAGAATTCGGAAAGTTAACCCTCCCTATGGTCTCATTTGCAAGCTGGCAAAAG 399 19639033 0.674755625 7 390 3047 0.969105691 1.997095009 0.058536585 0.388471178 0.603252033 399 14 5 596 3L:19639008-19639060 7 394.5 2769 FBgn0036897 334.61 15.00666667 22.97333333 1.178984489 26.2883163 17.17208358 -15 -15 -15 0.01 dme-miR-184-5p 6mer3-8 TGATAA 3L 1966728 1966733 + 3L_1966728_1966733_+ 1 1 1 0 SCOT FBtr0333431|FBtr0072843|FBtr0072844 1966678|1966678|1966678 1966805|1966805|1966805 3L + 1966706 1966777 3'utr SCOT FlyBase G27267.1 AGCTGCAATACCTCCGGTTGAGTGATAAACGAGTGCATTTATTTTTTGTTGACCGTGTGACAAAAACATTTG 16 1966723 0.981446333 6 15 113 0.941176471 1.204119983 0.058823529 0.0625 0.117647059 16 1 0 16 3L:1966706-1966777 6 SCOT FBtr0333431|FBtr0072843|FBtr0072844 1966678|1966678|1966678 1966805|1966805|1966805 TGATAA 6mer3-8 dme-miR-184-5p 3L + 1966712 1966750 3'utr SCOT FlyBase G20638.1 AATACCTCCGGTTGAGTGATAAACGAGTGCATTTATTTT 15 1966723 0.73565906 7 14 109 0.947368421 1.255272505 0.105263158 0.2 0.368421053 15 1 0 18 3L:1966712-1966750 6 14 2770 FBgn0035298 434.02 28.30666667 43.56 0.032256578 0.494583137 0.321395776 5 5 5 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 3L 19684066 19684071 - 3L_19684066_19684071_- 1 1 1 0 CG8765 FBtr0089597|FBtr0331859|FBtr0089598 19683939|19683939|19683939 19684831|19684831|19684831 3L - 19684014 19684093 3'utr CG8765 FlyBase G38277.1 AGCGGAAGAAAATAGTGTTTACTAGCTTAGGATGCTTCCGGTGCTGACGCAACCGGAACTAAAAATTCAATTAAATATTT 9 19684081 0.99379003 3 8 67 0.9 0.954242509 0.5 0.111111111 0.2 9 1 0 9 3L:19684014-19684093 6 CG8765 FBtr0331859|FBtr0089598|FBtr0089597 19683939|19683939|19683939 19684831|19684831|19684831 TAGCTT 6mer3-8 dme-miR-79-3p 3L - 19684060 19684099 3'utr CG8765 FlyBase G28926.1 AATAATAGCGGAAGAAAATAGTGTTTACTAGCTTAGGATG 7 19684081 0.981673304 2 7 45 1 0.954242509 0.333333333 0.285714286 0.444444444 7 0 0 9 3L:19684060-19684099 6 6.5 2771 FBgn0036900 407.0933333 15.89333333 24.23666667 0.015966854 0.40897651 0.268188695 10 10 10 0.01 dme-miR-304-5p 7mer-m8 TGAGATT 3L 19714622 19714628 - 3L_19714622_19714628_- 0.620203442 0.620203442 0.620203442 0 Trpml FBtr0074952 19714416 19715268 3L - 19714583 19714648 3'utr Trpml FlyBase G38288.1 AACTGCACTGGTCGACAAAATGAGATTTTTGGCAGTCTAAGCAAATAGTTATTTTAGAAAGTGTTT 8 19714628 0.983870499 4 6 54 0.9 0.954242509 0.1 0.25 0.4 8 1 0 9 3L:19714583-19714648 7 Trpml FBtr0074952 19714416 19715268 TGAGATT 7mer-m8 dme-miR-304-5p 3L - 19714603 19714645 3'utr Trpml FlyBase G28933.1 TGCACTGGTCGACAAAATGAGATTTTTGGCAGTCTAAGCAAAT 5 19714628 0.982196204 3 4 33 0.857142857 0.77815125 0.142857143 0.4 0.571428571 5 1 0 6 3L:19714603-19714645 7 5.5 2772 FBgn0262516 372.8066667 14.61333333 22.29666667 0.014752955 0.376368613 0.246673643 0 0 0 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 19715117 19715122 - 3L_19715117_19715122_- 1 1 1 0 Trpml FBtr0074952 19714416 19715268 3L - 19715090 19715146 3'utr Trpml FlyBase G38290.1 GAGATAAGAGAAACCATAACGTACGTACCTATGAGAAATTCCAAAAGCAGCTGCTCT 16 19715115 0.952527267 4 15 71 0.941176471 1.204119983 0.235294118 0.0625 0.117647059 16 1 0 16 3L:19715090-19715146 6 Trpml FBtr0074952 19714416 19715268 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L - 19715086 19715142 3'utr Trpml FlyBase G28935.1 TAAGAGAAACCATAACGTACGTACCTATGAGAAATTCCAAAAGCAGCTGCTCTGATC 10 19715115 0.948664606 5 10 44 1 1.230448921 0.117647059 0.6 0.764705882 10 0 0 17 3L:19715086-19715142 6 11.5 2773 FBgn0262516 372.8066667 14.61333333 22.29666667 0.030847088 0.786952555 0.515772163 -7 -7 -7 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3L 19719711 19719717 - 3L_19719711_19719717_- 0.521223855 0.521223855 0.521223855 0 CG42637 FBtr0302279|FBtr0302277|FBtr0302278 19719525|19719525|19719525 19720443|19720443|19720443 3L - 19719698 19719754 3'utr CG42637 FlyBase G38298.1 TGTATCAATGTGTTTTGCTAGTACGTAGTTAAGTGCGTGTGATTGTACGTAATATTT 12 19719711 0.819243621 5 10 102 0.846153846 1.041392685 0.153846154 0.083333333 0.153846154 12 2 0 11 3L:19719698-19719754 7 CG42637 FBtr0302278|FBtr0302277|FBtr0302279 19719525|19719525|19719525 19720443|19720443|19720443 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 19719691 19719740 3'utr CG42637 FlyBase G28941.1 TTGCTAGTACGTAGTTAAGTGCGTGTGATTGTACGTAATATTTAAGTCTC 13 19719711 0.930992974 4 13 123 1 1.230448921 0.117647059 0.307692308 0.470588235 13 0 0 17 3L:19719691-19719740 7 9.5 2774 FBgn0261360 1575.906667 29.86333333 45.63333333 0.006028276 0.318115861 0.208181154 -6 -6 -6 0.01 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3L 19720015 19720022 - 3L_19720015_19720022_- 0.63113665 0.63113665 0.63113665 0 CG42637 FBtr0302279|FBtr0302277|FBtr0302278 19719525|19719525|19719525 19720443|19720443|19720443 3L - 19719982 19720036 3'utr CG42637 FlyBase G38300.1 AGCCGAAAAAACCGTCTAGTCACAAGGTCTTCAGACTAGTTATTGTTTTATATAA 10 19720022 0.965434724 3 9 52 0.9375 0.875061263 0.5625 0.5 0.6875 10 0 1 15 3L:19719982-19720036 8 CG42637 FBtr0302278|FBtr0302277|FBtr0302279 19719525|19719525|19719525 19720443|19720443|19720443 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L - 19719992 19720036 3'utr CG42637 FlyBase G28943.1 AGCCGAAAAAACCGTCTAGTCACAAGGTCTTCAGACTAGTTATTG 11 19720022 0.937541916 4 11 43 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 3L:19719992-19720036 8 9.5 2775 FBgn0261360 1575.906667 29.86333333 45.63333333 0.006028276 0.318115861 0.208181154 0 0 0 0.01 dme-miR-304-5p 7mer-m8 TGAGATT 3L 19746038 19746044 - 3L_19746038_19746044_- 0.620203442 0.620203442 0.620203442 0 CG42638 FBtr0302283 19745832 19746684 3L - 19746023 19746063 5'utr CG42638 FlyBase G38320.1 ACTGCACTGGTCGACAAAATGAGATTTTTGGCAGTCTAAGC 8 19746044 0.957016742 2 8 61 1 0.954242509 0.111111111 0.125 0.222222222 8 0 0 9 3L:19746023-19746063 7 CG42638 FBtr0302283 19745832 19746684 TGAGATT 7mer-m8 dme-miR-304-5p 3L - 19746021 19746062 5'utr CG42638 FlyBase G28957.1 CTGCACTGGTCGACAAAATGAGATTTTTGGCAGTCTAAGCAA 8 19746036 0.830166943 3 7 51 0.9 0.954242509 0.3 0.25 0.4 8 1 0 9 3L:19746021-19746062 7 8 2776 FBgn0261361 372.8066667 14.61333333 22.29666667 0.021458844 0.547445255 0.358798027 0 -8 -4 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3L 19751127 19751133 - 3L_19751127_19751133_- 0.521223855 0.521223855 0.521223855 0 Gyc76C FBtr0333879|FBtr0302280|FBtr0302282|FBtr0302281 19750941|19750941|19750941|19750941 19751859|19751859|19751859|19751859 3L - 19751106 19751192 3'utr Gyc76C FlyBase G38330.1 AAAACGAGCGTGAAAAATGTAATGTATCAATGTGTTTTGCTAGTACGTAGTTAAGTGCGTGTGATTGTACGTAATATTTAAGTCTCT 18 19751127 0.962774925 6 14 128 0.857142857 0.954242509 0.047619048 0.166666667 0.285714286 18 2 1 18 3L:19751106-19751192 7 Gyc76C FBtr0302282|FBtr0302281|FBtr0333879|FBtr0302280 19750941|19750941|19750941|19750941 19751859|19751859|19751859|19751859 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 19751092 19751152 3'utr Gyc76C FlyBase G28965.1 TAGTACGTAGTTAAGTGCGTGTGATTGTACGTAATATTTAAGTCTCTAAAGCTAAAATAAT 18 19751127 0.990765368 4 15 161 0.888888889 1.380211242 0.259259259 0.388888889 0.592592593 18 3 0 24 3L:19751092-19751152 7 13 2777 FBgn0266136 1575.906667 29.86333333 45.63333333 0.008249219 0.435316442 0.284879474 -6 -6 -6 0.01 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3L 19751431 19751438 - 3L_19751431_19751438_- 0.63113665 0.63113665 0.63113665 0 Gyc76C FBtr0333879|FBtr0302280|FBtr0302282|FBtr0302281 19750941|19750941|19750941|19750941 19751859|19751859|19751859|19751859 3L - 19751388 19751454 3'utr Gyc76C FlyBase G38332.1 GAAGCCGAAAAAACCGTCTAGTCACAAGGTCTTCAGACTAGTTATTGTTTTATATAAAATAAACACA 15 19751438 0.955641751 5 14 72 0.9375 0.875061263 0.3125 0.066666667 0.125 15 0 1 15 3L:19751388-19751454 8 Gyc76C FBtr0302282|FBtr0302281|FBtr0333879|FBtr0302280 19750941|19750941|19750941|19750941 19751859|19751859|19751859|19751859 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L - 19751401 19751455 3'utr Gyc76C FlyBase G28967.1 AGAAGCCGAAAAAACCGTCTAGTCACAAGGTCTTCAGACTAGTTATTGTTTTATA 12 19751438 0.962288132 4 11 58 0.941176471 1.204119983 0.058823529 0.25 0.470588235 12 1 0 16 3L:19751401-19751455 8 11.5 2778 FBgn0266136 1575.906667 29.86333333 45.63333333 0.007297386 0.385087621 0.252008766 0 0 0 0.01 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3L 19810499 19810505 - 3L_19810499_19810505_- 0.620204031 0.620204031 0.620204031 0 Cyp305a1 FBtr0074925 19810401 19810551 3L - 19810466 19810521 3'utr Cyp305a1 FlyBase G38376.1 TATAGGTCAAGAGATATGGTGCTGAATCCACTAGGATATTTCCAAGGATTCCGAAA 97 19810505 0.962216806 8 96 501 0.991735537 1.77815125 0.074380165 0.206185567 0.363636364 97 0 1 120 3L:19810466-19810521 7 Cyp305a1 FBtr0074925 19810401 19810551 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3L - 19810465 19810536 3'utr Cyp305a1 FlyBase G28998.1 CGATGGTGTCGGTATTATAGGTCAAGAGATATGGTGCTGAATCCACTAGGATATTTCCAAGGATTCCGAAAA 69 19810505 0.966688779 6 65 351 0.96 1.681241237 0.15 0.333333333 0.54 69 3 1 96 3L:19810465-19810536 7 80 2779 FBgn0036910 2.666666667 0.18 0.286666667 30 444.4444444 279.0697674 0 0 0 0.01 dme-miR-1003-3p 7mer-A1 TGTGAGA 3L 19816446 19816452 - 3L_19816446_19816452_- 0.598382561 0.598382561 0.598382561 0 Fibp FBtr0332728 19816163 19816661 3L - 19816440 19816486 5'utr Fibp FlyBase G38390.1 CAATCGGGAGCTGCGCGATCTTTTCGTCGATCTCTGTGAGAAGCTTA 53 19816452 0.776996573 9 50 428 0.952380952 1.77815125 0.142857143 0.150943396 0.285714286 53 3 0 60 3L:19816440-19816486 7 Fibp FBtr0332728 19816163 19816661 TGTGAGA 7mer-A1 dme-miR-1003-3p 3L - 19816398 19816483 5'utr Fibp FlyBase G29003.1 TCGGGAGCTGCGCGATCTTTTCGTCGATCTCTGTGAGAAGCTTATTGATCCTTGGCGTCAGAATGGCTGGAACCGTGAGCAAGTGA 39 19816452 0.782832515 8 37 298 0.964285714 1.431363764 0.178571429 0.358974359 0.553571429 39 1 1 54 3L:19816398-19816483 7 42 2780 FBgn0036911 257 25.10333333 38.12666667 0.163424125 1.673084584 1.101591187 0 0 0 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA 3L 19829562 19829567 + 3L_19829562_19829567_+ 1 1 1 0 Deaf1 FBtr0332153 19829189 19830686 3L + 19829534 19829577 3'utr Deaf1 FlyBase G31463.1 AAAATGTAGCAAGCGAAAATCAAAGCAAGTGCAAAGGCGTAGAG 41 19829553 0.911460505 2 38 73 0.936170213 1.643452676 0.680851064 0.146341463 0.255319149 41 3 0 44 3L:19829534-19829577 6 Deaf1 FBtr0332153 19829189 19830686 GTGCAA 6mer3-8 dme-miR-92b-3p 3L + 19829536 19829575 3'utr Deaf1 FlyBase G23802.1 AATGTAGCAAGCGAAAATCAAAGCAAGTGCAAAGGCGTAG 5 19829553 0.648549364 3 5 7 1 1.041392685 0.545454545 0.6 0.818181818 5 0 0 11 3L:19829536-19829575 6 22.5 2781 FBgn0013799 381.6666667 13.13 20 0.058951965 1.713632902 1.125 9 9 9 0.01 dme-miR-14-3p 6mer2-7 AGACTG 3L 19829848 19829853 + 3L_19829848_19829853_+ 1 1 1 0 Deaf1 FBtr0332153 19829189 19830686 3L + 19829804 19829872 3'utr Deaf1 FlyBase G31466.1 TCTGAAATTACCATACATATTCGTCGATGTATACACTTTTCATTAGACTGTAAGCGCATAGTTAAACTT 30 19829846 0.986658708 7 29 255 0.967741935 1.477121255 0.35483871 0.033333333 0.064516129 30 1 0 30 3L:19829804-19829872 6 Deaf1 FBtr0332153 19829189 19830686 AGACTG 6mer2-7 dme-miR-14-3p 3L + 19829833 19829865 3'utr Deaf1 FlyBase G23803.1 TATACACTTTTCATTAGACTGTAAGCGCATAGT 11 19829846 0.678610043 2 11 85 1 1.113943352 0.384615385 0.181818182 0.307692308 11 0 0 13 3L:19829833-19829865 6 19.5 2782 FBgn0013799 381.6666667 13.13 20 0.051091703 1.485148515 0.975 2 2 2 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3L 19831866 19831872 - 3L_19831866_19831872_- 0.521223855 0.521223855 0.521223855 0 trc FBtr0074922|FBtr0332154 19831389|19830862 19832075|19832075 3L - 19831841 19831935 3'utr trc FlyBase G38394.1 AAATCCCCGATTTTCCTTTTTGAATGTCTTACCTACATGTGTATTTAAATACTAGCTAACATTTGTGATTCCAAACAAGAGAAGAATATGATAAC 71 19831873 0.982442607 11 70 526 0.988636364 1.939519253 0.011363636 0.197183099 0.352272727 71 1 0 87 3L:19831841-19831935 7 trc FBtr0074922|FBtr0332154 19831389|19830862 19832075|19832075 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 19831853 19831896 3'utr trc FlyBase G29007.1 TGTATTTAAATACTAGCTAACATTTGTGATTCCAAACAAGAGAA 35 19831873 0.916829377 6 31 258 0.865384615 1.653212514 0.019230769 0.371428571 0.576923077 35 7 0 45 3L:19831853-19831896 7 48.5 2783 FBgn0003744 320.6866667 15.89666667 24.39333333 0.151237969 3.050954078 1.988248155 1 1 1 0.01 dme-miR-307a-3p 6mer2-7 GTTGTG 3L 19860769 19860774 + 3L_19860769_19860774_+ 1 1 1 0 Papss FBtr0074886|FBtr0074888|FBtr0074887|FBtr0111108|FBtr0332146|FBtr0074885|FBtr0074889|FBtr0332147 19860610|19860610|19860610|19860610|19860610|19860610|19860610|19860610 19860925|19860925|19860925|19860925|19860925|19860925|19860925|19860925 3L + 19860720 19860775 3'utr Papss FlyBase G31502.1 TTTTTCCATTGTTCTAAGCCGAAATCCGTGGCTGTCCCCGTGTGTGAATGTTGTGC 8 19860748 0.984241742 4 7 60 0.875 0.84509804 0.25 0 0 8 1 0 7 3L:19860720-19860775 6 Papss FBtr0332147|FBtr0074889|FBtr0074885|FBtr0332146|FBtr0111108|FBtr0074887|FBtr0074888|FBtr0074886 19860610|19860610|19860610|19860610|19860610|19860610|19860610|19860610 19860925|19860925|19860925|19860925|19860925|19860925|19860925|19860925 GTTGTG 6mer2-7 dme-miR-307a-3p 3L + 19860735 19860784 3'utr Papss FlyBase G23825.1 AAGCCGAAATCCGTGGCTGTCCCCGTGTGTGAATGTTGTGCTCCTCCTAA 6 19860748 0.938390058 2 6 33 1 1.079181246 0.166666667 0.833333333 0.916666667 6 0 0 12 3L:19860735-19860784 6 2.5 2784 FBgn0020389 160.3333333 7.656666667 11.61333333 0.015592516 0.326512843 0.215269805 21 21 21 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 19867589 19867594 - 3L_19867589_19867594_- 1 0.999999998 0.999999999 0 Rab8 FBtr0074921 19867486 19868552 3L - 19867542 19867607 3'utr Rab8 FlyBase G38404.1 AGTAATATAAATAATGTGAAATTAAATGATAACTAATTGCATATTTGATATTAATTAATTACTTGT 16 19867596 0.776200893 8 16 139 1 1.322219295 0.047619048 0.1875 0.380952381 16 0 0 21 3L:19867542-19867607 6 Rab8 FBtr0074921 19867486 19868552 ATGTGA 6mer3-8 dme-miR-1003-3p 3L - 19867548 19867628 3'utr Rab8 FlyBase G29014.1 TTATGAACACATACACAGCGCAGTAATATAAATAATGTGAAATTAAATGATAACTAATTGCATATTTGATATTAATTAATT 12 19867595 0.986614097 9 11 94 0.9375 1.176091259 0.0625 0.333333333 0.5 12 1 0 15 3L:19867548-19867628 6 8 2785 FBgn0262518 1251.336667 71.43666667 109.69 0.006393164 0.111987308 0.072932811 2 1 1.5 0.01 dme-miR-307a-3p 6mer3-8 GGTTGT 3L 19868102 19868107 - 3L_19868102_19868107_- 1 1 1 0 Rab8 FBtr0308832|FBtr0308833|FBtr0074921 19868034|19867706|19867486 19868552|19868552|19868552 3L - 19868080 19868183 3'utr Rab8 FlyBase G38408.1 AGCCAATCCAACCCGCCCGCGTCCTTCTCGAAGAGGTTTTAGTATTTACGGAATTATGATTTTCTCTAGCAGCCATGGTTGTCGATTTGTAAATTATTAATTGT 61 19868107 0.809993318 17 60 451 0.986842105 1.875061263 0.078947368 0.213114754 0.368421053 61 1 0 75 3L:19868080-19868183 6 Rab8 FBtr0308832|FBtr0308833|FBtr0074921 19868034|19867706|19867486 19868552|19868552|19868552 GGTTGT 6mer3-8 dme-miR-307a-3p 3L - 19868086 19868179 3'utr Rab8 FlyBase G29019.1 AATCCAACCCGCCCGCGTCCTTCTCGAAGAGGTTTTAGTATTTACGGAATTATGATTTTCTCTAGCAGCCATGGTTGTCGATTTGTAAATTATT 33 19868107 0.984224098 10 31 247 0.906976744 1.591064607 0.11627907 0.242424242 0.418604651 33 4 0 39 3L:19868086-19868179 6 32 2786 FBgn0262518 1251.336667 71.43666667 109.69 0.025572654 0.447949232 0.291731243 0 0 0 0.01 dme-miR-277-3p 6mer3-8 TGCATT 3L 19868321 19868326 - 3L_19868321_19868326_- 1 1 1 0 Rab8 FBtr0308832|FBtr0308833|FBtr0074921 19868034|19867706|19867486 19868552|19868552|19868552 3L - 19868316 19868400 3'utr Rab8 FlyBase G38409.1 AATCAACCTTAAACATCAATCAGCAGCCGGCTCCCTTTAACCGAATAAGCGCGATAATGGAATAGAACACAAATTGCATTATGAA 22 19868355 0.942268947 10 18 97 0.833333333 1.397940009 0.133333333 0.363636364 0.533333333 22 5 0 25 3L:19868316-19868400 6 Rab8 FBtr0308832|FBtr0308833|FBtr0074921 19868034|19867706|19867486 19868552|19868552|19868552 TGCATT 6mer3-8 dme-miR-277-3p 3L - 19868315 19868386 3'utr Rab8 FlyBase G29020.1 ATCAATCAGCAGCCGGCTCCCTTTAACCGAATAAGCGCGATAATGGAATAGAACACAAATTGCATTATGAAA 15 19868327 0.92898634 7 13 59 0.944444444 0.929418926 0.111111111 0.133333333 0.277777778 15 0 1 17 3L:19868315-19868386 6 5 2787 FBgn0262518 1251.336667 71.43666667 109.69 0.003995727 0.069992068 0.045583007 29 1 15 0.01 dme-miR-2b-2-5p 6mer2-7 TGAAGA 3L 19881092 19881097 + 3L_19881092_19881097_+ 1 1 1 0 CG8334 FBtr0332148|FBtr0332149|FBtr0332150|FBtr0332151 19881066|19881066|19881066|19881066 19881783|19881783|19881783|19881783 3L + 19881021 19881138 stop_codon CG8334 FlyBase G31528.1 TGGACGAGACCGAGGGAGAGCTGAAGAAGCTGTGCTCAATTTCCTAACTGATGTCGTGGACATCGCGGCTATGAAGATATATTTTTCCATTTTATGCGTTCTGTTCTAGAGGGTTTGT 27 19881071 0.982890178 14 24 183 0.84375 1.130333768 0.125 0.148148148 0.28125 27 4 1 27 3L:19881021-19881138 6 CG8334 FBtr0332150|FBtr0332151|FBtr0332148|FBtr0332149 19881066|19881066|19881066|19881066 19881783|19881783|19881783|19881783 TGAAGA 6mer2-7 dme-miR-2b-2-5p 3L + 19881044 19881105 stop_codon CG8334 FlyBase G23840.1 AAGAAGCTGTGCTCAATTTCCTAACTGATGTCGTGGACATCGCGGCTATGAAGATATATTTT 17 19881070 0.658061533 8 16 119 0.92 0.884606581 0.16 0.352941176 0.56 17 0 2 23 3L:19881044-19881105 6 8.5 2788 FBgn0036913 1095.78 21.01 32.23333333 0.007757032 0.404569253 0.263702172 21 22 21.5 0.01 dme-miR-932-5p 6mer2-7 GAATTG 3L 19881258 19881263 + 3L_19881258_19881263_+ 1 0.999999993 0.999999997 0 CG8334 FBtr0332148|FBtr0332149|FBtr0332150|FBtr0332151 19881066|19881066|19881066|19881066 19881783|19881783|19881783|19881783 3L + 19881163 19881380 3'utr CG8334 FlyBase G31529.1 TTGTTATTTACTATTCTAAGCCTATTTTGATTTTCTGCAATAGTTGATTAATTATCCCCTAATTAGTTTTAGGACGAATTATTTTTCTTTGCCGAGAATTGTGTAATGCATGTAATATACAATATTCATATTTAGCTTGTAGATGATATGTTATATTGGTTGGCCAATGTGGAGCTTAGGTTGTTACGCCGAACAAATCCATTCTCAATAGTTTCTTG 42 19881252 0.987587027 19 40 368 0.980769231 1.40654018 0.326923077 0.214285714 0.365384615 42 0 1 51 3L:19881163-19881380 6 CG8334 FBtr0332150|FBtr0332151|FBtr0332148|FBtr0332149 19881066|19881066|19881066|19881066 19881783|19881783|19881783|19881783 GAATTG 6mer2-7 dme-miR-932-5p 3L + 19881214 19881282 3'utr CG8334 FlyBase G23841.1 TTATCCCCTAATTAGTTTTAGGACGAATTATTTTTCTTTGCCGAGAATTGTGTAATGCATGTAATATAC 12 19881252 0.987598913 8 11 112 0.947368421 0.954242509 0.421052632 0.333333333 0.578947368 12 0 1 18 3L:19881214-19881282 6 10.5 2789 FBgn0036913 1095.78 21.01 32.23333333 0.009582215 0.499762018 0.325749741 6 6 6 0.01 dme-miR-1007-3p 7mer-A1 GAGCTTA 3L 19881334 19881340 + 3L_19881334_19881340_+ 0.823349562 0.823349562 0.823349562 0 CG8334 FBtr0332148|FBtr0332149|FBtr0332150|FBtr0332151 19881066|19881066|19881066|19881066 19881783|19881783|19881783|19881783 3L + 19881163 19881380 3'utr CG8334 FlyBase G31529.1 TTGTTATTTACTATTCTAAGCCTATTTTGATTTTCTGCAATAGTTGATTAATTATCCCCTAATTAGTTTTAGGACGAATTATTTTTCTTTGCCGAGAATTGTGTAATGCATGTAATATACAATATTCATATTTAGCTTGTAGATGATATGTTATATTGGTTGGCCAATGTGGAGCTTAGGTTGTTACGCCGAACAAATCCATTCTCAATAGTTTCTTG 42 19881330 0.987587027 19 40 368 0.980769231 1.40654018 0.326923077 0.214285714 0.365384615 42 0 1 51 3L:19881163-19881380 7 CG8334 FBtr0332150|FBtr0332151|FBtr0332148|FBtr0332149 19881066|19881066|19881066|19881066 19881783|19881783|19881783|19881783 GAGCTTA 7mer-A1 dme-miR-1007-3p 3L + 19881286 19881374 3'utr CG8334 FlyBase G23842.1 ATTCATATTTAGCTTGTAGATGATATGTTATATTGGTTGGCCAATGTGGAGCTTAGGTTGTTACGCCGAACAAATCCATTCTCAATAGT 20 19881330 0.983753568 10 16 124 0.903225806 1.447158031 0.225806452 0.45 0.64516129 20 3 0 28 3L:19881286-19881374 7 12 2790 FBgn0036913 1095.78 21.01 32.23333333 0.010951103 0.571156592 0.372285419 4 4 4 0.01 dme-miR-932-5p 6mer3-8 GGAATT 3L 19881472 19881477 + 3L_19881472_19881477_+ 1 1 1 0 CG8334 FBtr0332148|FBtr0332149|FBtr0332150|FBtr0332151 19881066|19881066|19881066|19881066 19881783|19881783|19881783|19881783 3L + 19881448 19881489 3'utr CG8334 FlyBase G31531.1 ATTATTTATGCCAGACCATGTCGTGGAATTCCATTTAATTTG 8 19881476 0.727539148 3 7 68 0.875 0.84509804 0.25 0 0 8 1 0 7 3L:19881448-19881489 6 CG8334 FBtr0332150|FBtr0332151|FBtr0332148|FBtr0332149 19881066|19881066|19881066|19881066 19881783|19881783|19881783|19881783 GGAATT 6mer3-8 dme-miR-932-5p 3L + 19881452 19881495 3'utr CG8334 FlyBase G23844.1 TTTATGCCAGACCATGTCGTGGAATTCCATTTAATTTGTAATTA 5 19881476 0.970495464 5 5 47 1 0.84509804 0.142857143 0.4 0.571428571 5 0 0 7 3L:19881452-19881495 6 6 2791 FBgn0036913 1095.78 21.01 32.23333333 0.005475552 0.285578296 0.186142709 -4 -4 -4 0.01 dme-miR-8-3p 6mer2-7 AGTATT 3L 19881695 19881700 + 3L_19881695_19881700_+ 1 0.99999537 0.999997685 3.25E-06 CG8334 FBtr0332148|FBtr0332149|FBtr0332150|FBtr0332151 19881066|19881066|19881066|19881066 19881783|19881783|19881783|19881783 3L + 19881646 19881730 3'utr CG8334 FlyBase G31534.1 ATGTATTGATTGGCTTGTGTGACGCGCCGAGCAGATTCGGTTCGAAATTAGTATTGCGCTTATCAATTATGACTTCAATATGTCT 36 19881699 0.72950374 10 34 318 0.95 1.579783597 0.125 0.083333333 0.175 36 2 0 38 3L:19881646-19881730 6 CG8334 FBtr0332150|FBtr0332151|FBtr0332148|FBtr0332149 19881066|19881066|19881066|19881066 19881783|19881783|19881783|19881783 AGTATT 6mer2-7 dme-miR-8-3p 3L + 19881680 19881725 3'utr CG8334 FlyBase G23846.1 ATTCGGTTCGAAATTAGTATTGCGCTTATCAATTATGACTTCAATA 24 19881699 0.7325839 6 23 181 0.945945946 1.544068044 0.027027027 0.375 0.594594595 24 2 0 35 3L:19881680-19881725 6 22 2792 FBgn0036913 1095.78 21.01 32.23333333 0.020077023 1.047120419 0.682523268 -4 -4 -4 0.01 dme-bantam-3p 7mer-A1 GATCTCA 3L 19882166 19882172 - 3L_19882166_19882172_- 0.823349562 0.823349562 0.823349562 0 Mi-2 FBtr0100394|FBtr0302046|FBtr0074919|FBtr0332152 19882049|19882049|19882049|19882049 19882448|19882448|19882448|19882448 3L - 19882154 19882247 3'utr Mi-2 FlyBase G38423.1 TGCAAAACGTTTGACACTTGGCGAATGGCGAGTTCGGTGTTTCCAGGCTTCGGTTTCTGCTCCTGGGGCGGATCGGATCTCAGCAGAGCACGAC 12 19882194 0.969452458 7 11 65 1 1.230448921 0.117647059 0.333333333 0.529411765 12 0 0 17 3L:19882154-19882247 7 Mi-2 FBtr0100394|FBtr0302046|FBtr0074919|FBtr0332152 19882049|19882049|19882049|19882049 19882448|19882448|19882448|19882448 GATCTCA 7mer-A1 dme-bantam-3p 3L - 19882155 19882197 3'utr Mi-2 FlyBase G29028.1 CGGTTTCTGCTCCTGGGGCGGATCGGATCTCAGCAGAGCACGA 11 19882194 0.966642918 2 9 56 0.705882353 1.079181246 0.352941176 0.363636364 0.588235294 11 5 0 12 3L:19882155-19882197 7 8.5 2793 FBgn0262519 3000.776667 56.31 86.75333333 0.0028326 0.150950098 0.097978944 22 22 22 0.01 dme-miR-277-3p 6mer2-7 GCATTT 3L 19912425 19912430 + 3L_19912425_19912430_+ 1 1 1 0 Prp3 FBtr0074892|FBtr0074891 19912327|19912327 19912504|19912504 3L + 19912382 19912459 3'utr Prp3 FlyBase G31537.1 TCGGAAAGATACAAGTCTGAATTAAAGTTTTGAAGCGCGCTACGCATTTGATGTTATTATTTTCGAAGCTATTCGGAA 18 19912429 0.980944524 9 15 109 0.884615385 1.361727836 0.192307692 0.222222222 0.461538462 18 3 0 23 3L:19912382-19912459 6 Prp3 FBtr0074892|FBtr0074891 19912327|19912327 19912504|19912504 GCATTT 6mer2-7 dme-miR-277-3p 3L + 19912387 19912436 3'utr Prp3 FlyBase G23847.1 AAGATACAAGTCTGAATTAAAGTTTTGAAGCGCGCTACGCATTTGATGTT 9 19912429 0.990492863 4 6 60 0.777777778 1.146128036 0.555555556 0.555555556 0.777777778 9 4 0 14 3L:19912387-19912436 6 10.5 2794 FBgn0036915 320.61 18.75 28.82333333 0.03275007 0.56 0.364288192 -4 -4 -4 0.01 dme-miR-305-5p 6mer2-7 GTACAA 3L 19918412 19918417 - 3L_19918412_19918417_- 0.994506478 0.999998729 0.997252604 0.003883572 Su(z)12 FBtr0074917|FBtr0074916 19918240|19918240 19919000|19919365 3L - 19918339 19918441 3'utr Su(z)12 FlyBase G38490.1 AAGTCTATTTTTAAAGTAAAGTTCGTACAAGCGAAACAAACAGCTCCAAAAAAAAAATCCAGCAAGAACACTATCACTAGAGCCTACGACTACATACATTTAT 26 19918432 0.98255121 10 24 173 0.892857143 0.920818754 0 0.076923077 0.142857143 26 1 2 25 3L:19918339-19918441 6 Su(z)12 FBtr0074916|FBtr0074917 19918240|19918240 19919365|19919000 GTACAA 6mer2-7 dme-miR-305-5p 3L - 19918402 19918440 3'utr Su(z)12 FlyBase G29076.1 AGTCTATTTTTAAAGTAAAGTTCGTACAAGCGAAACAAA 15 19918432 0.98206353 5 14 116 0.944444444 1.230448921 0.055555556 0.2 0.333333333 15 1 0 17 3L:19918402-19918440 6 17 2795 FBgn0020887 388.31 12.01333333 18.55333333 0.043779455 1.41509434 0.916277398 15 15 15 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3L 19918636 19918642 - 3L_19918636_19918642_- 0.808818836 0.808818836 0.808818836 0 Su(z)12 FBtr0074917|FBtr0074917|FBtr0074916|FBtr0074916 19918240|19918240|19918240|19918240 19919000|19919000|19919365|19919365 3L - 19918544 19918662 3'utr Su(z)12 FlyBase G38492.1 TTTAATTCTAATTTGGCAGTTACTTAAACTTAACAAATCTACAGGGCTAATGGAAAATCAAAATTCAAAATCGATTTGAATTCCCATGCTTACACTTCACATCCGGTTTGGATTGTGTA 24 19918650 0.98759471 11 24 205 1 1.447158031 0 0.166666667 0.285714286 24 0 0 28 3L:19918544-19918662 7 Su(z)12 FBtr0074916|FBtr0074916|FBtr0074917|FBtr0074917 19918240|19918240|19918240|19918240 19919365|19919365|19919000|19919000 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3L - 19918622 19918667 3'utr Su(z)12 FlyBase G29079.1 TATACTTTAATTCTAATTTGGCAGTTACTTAAACTTAACAAATCTA 19 19918648 0.723865686 5 18 173 0.896551724 1.414973348 0 0.315789474 0.551724138 19 3 0 26 3L:19918622-19918667 7 18 2796 FBgn0020887 388.31 12.01333333 18.55333333 0.046354717 1.498335183 0.970176069 8 6 7 0.01 dme-miR-1006-3p 7mer-m8 CGAATTT 3L 19918741 19918747 - 3L_19918741_19918747_- 0.661614704 0.661614704 0.661614704 0 Su(z)12 FBtr0074917|FBtr0074916 19918240|19918240 19919000|19919365 3L - 19918681 19918814 3'utr Su(z)12 FlyBase G38493.1 TCTATTCTATTATGTTGTGTTATATTTTAACTGATTGATCATGTTGGACATTTGTTAAGACTTGTGTCGAATTTGAAATTGACCTCAAAATCGTTCATTTGGTTCGTTGCTACCAGTTGCTACGCCACAATTGT 275 19918736 0.988134076 15 259 2363 0.942307692 1.426954645 0.157051282 0.112727273 0.217948718 275 8 10 294 3L:19918681-19918814 7 Su(z)12 FBtr0074916|FBtr0074917 19918240|19918240 19919365|19919000 CGAATTT 7mer-m8 dme-miR-1006-3p 3L - 19918671 19918832 3'utr Su(z)12 FlyBase G29080.1 AAGTTTATTGCTATATATTCTATTCTATTATGTTGTGTTATATTTTAACTGATTGATCATGTTGGACATTTGTTAAGACTTGTGTCGAATTTGAAATTGACCTCAAAATCGTTCATTTGGTTCGTTGCTACCAGTTGCTACGCCACAATTGTATCTAAAATC 134 19918736 0.986827987 15 130 1130 0.979166667 1.973127854 0.135416667 0.335820896 0.536458333 134 3 1 188 3L:19918671-19918832 7 183 2797 FBgn0020887 388.31 12.01333333 18.55333333 0.471272952 15.23307436 9.863456701 -11 -11 -11 0.01 dme-miR-34-5p 8mer-A1 CACTGCCA 3L 19919163 19919170 - 3L_19919163_19919170_- 0.678407974 0.678407974 0.678407974 0 Su(z)12 FBtr0074916 19918240 19919365 3L - 19919123 19919196 3'utr Su(z)12 FlyBase G38494.2 CAACCGCAACAAAAGCAATAACCATTCACTGCCAGCAACCAGTAACAACGCCAGTAGCAGCAGCAGCAACAGCA 173 19919172 0.999927653 5 171 540 0.979695431 1.586587305 0.020304569 0.10982659 0.218274112 173 0 4 193 3L:19919123-19919196 8 Su(z)12 FBtr0074916 19918240 19919365 CACTGCCA 8mer-A1 dme-miR-34-5p 3L - 19919122 19919195 3'utr Su(z)12 FlyBase G29082.1 AACCGCAACAAAAGCAATAACCATTCACTGCCAGCAACCAGTAACAACGCCAGTAGCAGCAGCAGCAACAGCAA 80 19919172 0.907329834 3 78 240 0.936507937 2.071882007 0 0.3375 0.579365079 80 8 0 118 3L:19919122-19919195 8 123 2798 FBgn0020887 388.31 12.01333333 18.55333333 0.31675723 10.23862375 6.629536471 2 2 2 0.01 dme-miR-965-3p 7mer-m8 TACGCTT 3L 19932238 19932244 + 3L_19932238_19932244_+ 0.620204855 0.620204855 0.620204855 0 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 3L + 19932217 19932276 3'utr RhoGDI FlyBase G31574.1 CACAACTTACAACATACATCATACGCTTTTTGTTTTCCCTCAAACATGCCTTGTAAATGA 53 19932238 0.839527775 8 49 492 0.9375 1.176091259 0.125 0.20754717 0.34375 53 1 3 60 3L:19932217-19932276 7 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 TACGCTT 7mer-m8 dme-miR-965-3p 3L + 19932211 19932272 3'utr RhoGDI FlyBase G23873.1 ACGACACACAACTTACAACATACATCATACGCTTTTTGTTTTCCCTCAAACATGCCTTGTAA 49 19932245 0.923595682 7 42 441 0.882352941 1.77815125 0.235294118 0.367346939 0.544117647 49 8 0 60 3L:19932211-19932272 7 47.5 2799 FBgn0036921 5639.993333 451.2133333 691.66 0.008421996 0.105271712 0.068675361 0 -7 -3.5 0.01 dme-miR-8-3p 6mer2-7 AGTATT 3L 19932334 19932339 + 3L_19932334_19932339_+ 1 1 1 0 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 3L + 19932294 19932352 3'utr RhoGDI FlyBase G31575.1 AAGTGTAAGCGAATTTTTCCAAAAGTGTAATTGATCGTCAAGTATTTTTGTTAACGGTA 20 19932325 0.977382938 6 20 132 1 1.322219295 0.523809524 0.05 0.095238095 20 0 0 21 3L:19932294-19932352 6 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 AGTATT 6mer2-7 dme-miR-8-3p 3L + 19932290 19932356 3'utr RhoGDI FlyBase G23874.1 CCAAAAGTGTAAGCGAATTTTTCCAAAAGTGTAATTGATCGTCAAGTATTTTTGTTAACGGTATTAA 20 19932325 0.981392546 6 20 148 1 1.462397998 0.517241379 0.35 0.551724138 20 0 0 29 3L:19932290-19932356 6 17.5 2800 FBgn0036921 5639.993333 451.2133333 691.66 0.003102841 0.038784315 0.025301449 9 9 9 0.01 dme-miR-277-3p 6mer2-7 GCATTT 3L 19932449 19932454 + 3L_19932449_19932454_+ 1 1 1 0 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 3L + 19932425 19932592 3'utr RhoGDI FlyBase G31576.2 AATTGGAATGTGTGCAGATGAAGAGCATTTTTCGCCTAAGTCCTCCTCAATGAGAGTCAAGTCAAAACCAAGTCAAGTCACTAGGCCAGTCAGTCAGTCAGTCAGCCAACCAGTCAGTCAGACAGTCAGTCGTTTGGTTCTTAATGCCATTGCCTATGTTTAACATAC 52 19932455 0.873984594 18 48 345 0.967741935 1.77815125 0.129032258 0.173076923 0.306451613 52 2 0 60 3L:19932425-19932592 6 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 GCATTT 6mer2-7 dme-miR-277-3p 3L + 19932387 19932594 3'utr RhoGDI FlyBase G23875.1 TGTAAAGCCATGATAAGTATTTTTGATACCCTATTTGCAATTGGAATGTGTGCAGATGAAGAGCATTTTTCGCCTAAGTCCTCCTCAATGAGAGTCAAGTCAAAACCAAGTCAAGTCACTAGGCCAGTCAGTCAGTCAGTCAGCCAACCAGTCAGTCAGACAGTCAGTCGTTTGGTTCTTAATGCCATTGCCTATGTTTAACATACAT 46 19932455 0.98282691 21 43 325 0.971830986 1.537819095 0.14084507 0.347826087 0.577464789 46 1 1 69 3L:19932387-19932594 6 13 2801 FBgn0036921 5639.993333 451.2133333 691.66 0.002304967 0.028811205 0.018795362 -6 -6 -6 0.01 dme-miR-263a-5p 7mer-m1 TGCCATT 3L 19932569 19932575 + 3L_19932569_19932575_+ 0.765586663 0.765586663 0.765586663 0 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 3L + 19932425 19932592 3'utr RhoGDI FlyBase G31576.2 AATTGGAATGTGTGCAGATGAAGAGCATTTTTCGCCTAAGTCCTCCTCAATGAGAGTCAAGTCAAAACCAAGTCAAGTCACTAGGCCAGTCAGTCAGTCAGTCAGCCAACCAGTCAGTCAGACAGTCAGTCGTTTGGTTCTTAATGCCATTGCCTATGTTTAACATAC 52 19932569 0.873984594 18 48 345 0.967741935 1.77815125 0.129032258 0.173076923 0.306451613 52 2 0 60 3L:19932425-19932592 7 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 TGCCATT 7mer-m1 dme-miR-263a-5p 3L + 19932387 19932594 3'utr RhoGDI FlyBase G23875.1 TGTAAAGCCATGATAAGTATTTTTGATACCCTATTTGCAATTGGAATGTGTGCAGATGAAGAGCATTTTTCGCCTAAGTCCTCCTCAATGAGAGTCAAGTCAAAACCAAGTCAAGTCACTAGGCCAGTCAGTCAGTCAGTCAGCCAACCAGTCAGTCAGACAGTCAGTCGTTTGGTTCTTAATGCCATTGCCTATGTTTAACATACAT 46 19932569 0.98282691 21 43 325 0.971830986 1.537819095 0.14084507 0.347826087 0.577464789 46 1 1 69 3L:19932387-19932594 7 13.5 2802 FBgn0036921 5639.993333 451.2133333 691.66 0.00239362 0.029919329 0.01951826 0 0 0 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 3L 19932641 19932647 + 3L_19932641_19932647_+ 0.620204266 0.620204266 0.620204266 0 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 3L + 19932629 19932659 3'utr RhoGDI FlyBase G31577.1 AAGAAAGTTGTTTGCATTTCGCTGTGTATTT 8 19932643 0.620224681 2 8 74 1 1 0.6 0.25 0.4 8 0 0 10 3L:19932629-19932659 7 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 TGCATTT 7mer-m8 dme-miR-277-3p 3L + 19932629 19932658 3'utr RhoGDI FlyBase G23876.1 AAGAAAGTTGTTTGCATTTCGCTGTGTATT 8 19932646 0.66493294 4 8 78 1 1.146128036 0.285714286 0.625 0.785714286 8 0 0 14 3L:19932629-19932658 7 8 2803 FBgn0036921 5639.993333 451.2133333 691.66 0.001418441 0.017729973 0.011566377 -2 -5 -3.5 0.01 dme-miR-33-5p 7mer-A1 AATGCAA 3L 19932884 19932890 + 3L_19932884_19932890_+ 0.782911824 0.782911824 0.782911824 0 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 3L + 19932817 19932902 3'utr RhoGDI FlyBase G31579.1 ATTATTCTAACTATATATCTCTGTGTATTTTTTGTGTACAACATACCATATATGCGAAAGCTGATTGAATGCAACCGAAGAGCAAT 35 19932882 0.957582578 5 34 169 0.973684211 1.568201724 0.210526316 0.057142857 0.131578947 35 1 0 37 3L:19932817-19932902 7 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 AATGCAA 7mer-A1 dme-miR-33-5p 3L + 19932856 19932905 3'utr RhoGDI FlyBase G23877.1 AACATACCATATATGCGAAAGCTGATTGAATGCAACCGAAGAGCAATAAA 35 19932882 0.663941034 6 33 139 0.983050847 1.763427994 0.152542373 0.5 0.711864407 34 1 0 58 3L:19932856-19932905 7 31.5 2804 FBgn0036921 5639.993333 451.2133333 691.66 0.005585113 0.069811767 0.045542608 2 2 2 0.01 dme-miR-1007-3p 6mer3-8 TGAGCT 3L 19979008 19979013 - 3L_19979008_19979013_- 1 1 1 0 CG14182 FBtr0074913|FBtr0346534|FBtr0331802 19978811|19978711|19978811 19979187|19979187|19979187 3L - 19978874 19979058 3'utr CG14182 FlyBase G38509.1 AGTTAACATATTTAAATTAGGTTAAATAAGCTGAAAACTCGAATATGAGCTACACGAATCTCTCATGCACTTGATACATTTTAAAAATTATTTACTTTTAAACCTGATTTTATTTTAATTGATAAATTTAGTTGATAAATGTTTAGTAAGCCAGACTTGATCATATCTAAGGAATAAGCGTAGCC 59 19978993 0.98098522 17 54 398 0.907692308 1.469822016 0.184615385 0.084745763 0.169230769 59 5 1 59 3L:19978874-19979058 6 CG14182 FBtr0331802|FBtr0346534|FBtr0074913 19978811|19978711|19978811 19979187|19979187|19979187 TGAGCT 6mer3-8 dme-miR-1007-3p 3L - 19978948 19979072 3'utr CG14182 FlyBase G29093.1 AAACACTCTATCTTAGTTAACATATTTAAATTAGGTTAAATAAGCTGAAAACTCGAATATGAGCTACACGAATCTCTCATGCACTTGATACATTTTAAAAATTATTTACTTTTAAACCTGATTTT 26 19978994 0.752567745 13 23 177 0.911764706 1.190331698 0.088235294 0.269230769 0.441176471 26 2 1 31 3L:19978948-19979072 6 15 2805 FBgn0036922 39 5.416666667 8.226666667 0.384615385 2.769230769 1.823338736 -20 -19 -19.5 0.01 dme-miR-308-3p 8mer-m1 CTGTGATT 3L 19979131 19979138 - 3L_19979131_19979138_- 0.385560641 0.385560641 0.385560641 0 CG14182 FBtr0074913|FBtr0346534|FBtr0331802 19978811|19978711|19978811 19979187|19979187|19979187 3L - 19979117 19979187 NoAnnotation G38510.1 AGACGTGACCACGGCATCGCTAGATTCCTCATTTCATTTGCAGTTTGCTCTGTGATTTGTTACATCTTTTG 131 19979139 0.810863064 16 124 1446 0.961783439 1.480006943 0.133757962 0.183206107 0.318471338 131 2 4 151 3L:19979117-19979187 8 CG14182 FBtr0331802|FBtr0346534|FBtr0074913 19978811|19978711|19978811 19979187|19979187|19979187 CTGTGATT 8mer-m1 dme-miR-308-3p 3L - 19979117 19979189 stop_codon CG14182 FlyBase G29094.1 AAAGACGTGACCACGGCATCGCTAGATTCCTCATTTCATTTGCAGTTTGCTCTGTGATTTGTTACATCTTTTG 86 19979131 0.992770266 12 80 925 0.946969697 2.096910013 0.075757576 0.465116279 0.651515152 86 7 0 125 3L:19979117-19979189 8 103.5 2806 FBgn0036922 39 5.416666667 8.226666667 2.653846154 19.10769231 12.58103728 1 -7 -3 0.01 dme-miR-282-5p 6mer2-7 GAGGCT 3L 20150143 20150148 - 3L_20150143_20150148_- 1 1 1 0 CG42674 FBtr0302712|FBtr0302713|FBtr0302715|FBtr0302714|FBtr0332699|FBtr0302716|FBtr0332698 20149612|20149612|20149612|20149612|20149612|20149612|20149612 20151571|20151571|20151571|20151571|20151571|20151571|20151571 3L - 20150108 20150172 3'utr CG42674 FlyBase G38525.1 TGATTTAAGGGACTACACCACAGTGAGGCTTTGGATTTGGCCAAACGATTTGTACATATTACCCC 63 20150149 0.965852218 5 61 327 0.971014493 1.826074803 0.333333333 0.079365079 0.15942029 63 2 0 67 3L:20150108-20150172 6 CG42674 FBtr0302714|FBtr0302715|FBtr0302713|FBtr0302712|FBtr0332698|FBtr0302716|FBtr0332699 20149612|20149612|20149612|20149612|20149612|20149612|20149612 20151571|20151571|20151571|20151571|20151571|20151571|20151571 GAGGCT 6mer2-7 dme-miR-282-5p 3L - 20150130 20150173 3'utr CG42674 FlyBase G29101.1 TTGATTTAAGGGACTACACCACAGTGAGGCTTTGGATTTGGCCA 41 20150149 0.925082029 2 40 195 0.985714286 1.838849091 0.2 0.487804878 0.7 41 1 0 69 3L:20150130-20150173 6 51 2807 FBgn0261556 3405.386667 53.14 81.81333333 0.014976273 0.959729018 0.623370274 1 1 1 0.01 dme-miR-8-3p 7mer-A1 AGTATTA 3L 20150610 20150616 - 3L_20150610_20150616_- 0.823349562 0.823349562 0.823349562 0 CG42674 FBtr0302712|FBtr0302713|FBtr0302715|FBtr0302714|FBtr0332699|FBtr0302716|FBtr0332698 20149612|20149612|20149612|20149612|20149612|20149612|20149612 20151571|20151571|20151571|20151571|20151571|20151571|20151571 3L - 20150593 20150642 3'utr CG42674 FlyBase G38527.1 ACGAAAAAGTTTGTATACCAATATAGAGTATTAGCCGATCTTCGGTCAAA 50 20150620 0.86578485 7 40 408 0.806451613 1.397940009 0.258064516 0.18 0.338709677 50 11 1 50 3L:20150593-20150642 7 CG42674 FBtr0302714|FBtr0302715|FBtr0302713|FBtr0302712|FBtr0332698|FBtr0302716|FBtr0332699 20149612|20149612|20149612|20149612|20149612|20149612|20149612 20151571|20151571|20151571|20151571|20151571|20151571|20151571 AGTATTA 7mer-A1 dme-miR-8-3p 3L - 20150595 20150635 3'utr CG42674 FlyBase G29102.2 AGTTTGTATACCAATATAGAGTATTAGCCGATCTTCGGTCA 37 20150620 0.893453878 5 21 265 0.633333333 1.278753601 0.2 0.405405405 0.633333333 37 21 1 38 3L:20150595-20150635 7 42.5 2808 FBgn0261556 3405.386667 53.14 81.81333333 0.012480227 0.799774181 0.519475228 4 4 4 0.01 dme-miR-184-3p 6mer3-8 TCCGTC 3L 20151515 20151520 - 3L_20151515_20151520_- 1 1 1 0 CG42674 FBtr0302712|FBtr0302713|FBtr0302715|FBtr0302714|FBtr0332699|FBtr0302716|FBtr0332698 20149612|20149612|20149612|20149612|20149612|20149612|20149612 20151571|20151571|20151571|20151571|20151571|20151571|20151571 3L - 20151494 20151533 3'utr CG42674 FlyBase G38533.1 ACTTAGCCATAGATCCGTCACAAACTACCAGGATAAACTA 14 20151520 0.734943943 3 13 53 0.941176471 1.204119983 0 0.142857143 0.294117647 14 1 0 16 3L:20151494-20151533 6 CG42674 FBtr0302714|FBtr0302715|FBtr0302713|FBtr0302712|FBtr0332698|FBtr0302716|FBtr0332699 20149612|20149612|20149612|20149612|20149612|20149612|20149612 20151571|20151571|20151571|20151571|20151571|20151571|20151571 TCCGTC 6mer3-8 dme-miR-184-3p 3L - 20151488 20151533 3'utr CG42674 FlyBase G29105.1 ACTTAGCCATAGATCCGTCACAAACTACCAGGATAAACTACACGTA 8 20151520 0.948642068 3 8 32 1 1.230448921 0 0.625 0.823529412 8 0 0 17 3L:20151488-20151533 6 10.5 2809 FBgn0261556 3405.386667 53.14 81.81333333 0.00308335 0.197591268 0.128340939 0 0 0 0.01 dme-miR-33-5p 8mer-A1 CAATGCAA 3L 20233633 20233640 - 3L_20233633_20233640_- 0.634552243 0.634552243 0.634552243 0 CG17233 FBtr0074850|FBtr0306327|FBtr0074851|FBtr0306328 20233547|20233171|20233547|20233171 20233867|20233867|20233867|20233867 3L - 20233634 20233690 3'utr CG17233 FlyBase G38573.1 ATATTGTACTGTGTAGGCCTTTAGTTTAAGATAGAGTCTATAGTCTTGGACAATGCA 37 20233650 0.748925129 7 33 299 0.860465116 0.86923172 0.069767442 0.108108108 0.23255814 37 2 4 37 3L:20233634-20233690 6 CG17233 FBtr0306328|FBtr0074851|FBtr0306327|FBtr0074850 20233171|20233547|20233171|20233547 20233867|20233867|20233867|20233867 CAATGCAA 8mer-A1 dme-miR-33-5p 3L - 20233635 20233685 3'utr CG17233 FlyBase G29135.1 GTACTGTGTAGGCCTTTAGTTTAAGATAGAGTCTATAGTCTTGGACAATGC 22 20233650 0.825666055 6 17 184 0.823529412 0.669006781 0.117647059 0.363636364 0.588235294 22 1 5 28 3L:20233635-20233685 5 17.5 2810 FBgn0036958 822.6966667 24.90333333 38.37 0.02127151 0.702717173 0.456085483 10 10 10 0.01 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3L 20268977 20268984 - 3L_20268977_20268984_- 0.63113665 0.63113665 0.63113665 0 gogo FBtr0074848 20268857 20269444 3L - 20268960 20269031 3'utr gogo FlyBase G38601.1 ATGAAATTTTGTGATCTTCATTTTGTGCTTGTAAGCATTGGAAAAATTCTAGTCAATACATTAGTCAAAATT 36 20268985 0.840256325 7 35 276 0.976744186 1.322219295 0.139534884 0.138888889 0.279069767 36 0 1 42 3L:20268960-20269031 8 gogo FBtr0074848 20268857 20269444 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L - 20268953 20269001 3'utr gogo FlyBase G29151.1 GTAAGCATTGGAAAAATTCTAGTCAATACATTAGTCAAAATTAATTAGC 19 20268985 0.974340804 3 19 128 1 1.491361694 0.096774194 0.473684211 0.677419355 19 0 0 31 3L:20268953-20269001 8 22.5 2811 FBgn0052227 17 0.396666667 0.6 1.323529412 56.72268908 37.5 1 1 1 0.01 dme-miR-2535b-3p 6mer3-8 CCGTGA 3L 20297192 20297197 - 3L_20297192_20297197_- 1 1 1 0 Pex23 FBtr0074846 20297127 20297459 3L - 20297170 20297237 3'utr Pex23 FlyBase G38604.1 TTTAGTTTAAGTCTTTTGTTTAGTTTAACAAATCCAGCAGCCGTGATTGTATTTCCTTTTTGTAAGCA 40 20297190 0.741890731 7 38 298 0.960784314 1.389166084 0.078431373 0.225 0.392156863 40 1 1 49 3L:20297170-20297237 6 Pex23 FBtr0074846 20297127 20297459 CCGTGA 6mer3-8 dme-miR-2535b-3p 3L - 20297170 20297213 3'utr Pex23 FlyBase G29153.1 TTAACAAATCCAGCAGCCGTGATTGTATTTCCTTTTTGTAAGCA 23 20297190 0.666846163 4 21 130 0.944444444 1.531478917 0.027777778 0.47826087 0.666666667 23 2 0 34 3L:20297170-20297213 6 28.5 2812 FBgn0052226 261.2133333 7.016666667 10.72666667 0.109106222 4.06175772 2.65692977 -7 -7 -7 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 20297371 20297376 - 3L_20297371_20297376_- 1 1 1 0 Pex23 FBtr0074846 20297127 20297459 3L - 20297298 20297421 3'utr Pex23 FlyBase G38605.1 ACGGACGATCCTGTTTGTTGTATTTATTCATATTTACAAGCTTATATGTGACCATGCCAACGCTTTTTCCAAAGTATATGAAAATAAGATGTTTCCTATTTAAGCTATTTGAAACGTATTATTT 62 20297355 0.985104955 14 59 476 0.960526316 1.562292864 0.184210526 0.177419355 0.328947368 62 2 1 73 3L:20297298-20297421 6 Pex23 FBtr0074846 20297127 20297459 ATGTGA 6mer3-8 dme-miR-1003-3p 3L - 20297320 20297391 3'utr Pex23 FlyBase G29154.1 TATTTACAAGCTTATATGTGACCATGCCAACGCTTTTTCCAAAGTATATGAAAATAAGATGTTTCCTATTTA 36 20297378 0.980915157 14 32 231 0.842105263 1.681241237 0.105263158 0.444444444 0.649122807 36 9 0 48 3L:20297320-20297391 6 36.5 2813 FBgn0052226 261.2133333 7.016666667 10.72666667 0.13973253 5.201900238 3.402734618 -21 2 -9.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3L 20308852 20308857 + 3L_20308852_20308857_+ 1 1 1 0 CG6597 FBtr0074837|FBtr0332775|FBtr0074838|FBtr0344228 20308825|20308825|20308825|20308825 20309194|20309511|20309511|20309194 3L + 20308802 20308927 stop_codon CG6597 FlyBase G31674.2 CACCTCCACAACCGGATCTAGCTGAGAAAAGCTGTATCGAGTCGCCTATTTCTAGTTCAACTTTGGGAGCTCAGTGCGGAGAGGAGTTCGCGGAGACTGAGTCGGAGATGGGATGCGATGCGATGG 27 20308852 0.979593359 12 25 167 0.96875 1.491361694 0.4375 0.111111111 0.25 27 1 0 31 3L:20308802-20308927 6 CG6597 FBtr0074838|FBtr0344228|FBtr0074837|FBtr0332775 20308825|20308825|20308825|20308825 20309511|20309194|20309194|20309511 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 20308839 20308909 5'utr CG6597 FlyBase G23948.1 CGAGTCGCCTATTTCTAGTTCAACTTTGGGAGCTCAGTGCGGAGAGGAGTTCGCGGAGACTGAGTCGGAGA 15 20308852 0.984716353 6 13 104 0.92 1.361727836 0.2 0.466666667 0.68 15 2 0 23 3L:20308839-20308909 6 12.5 2814 FBgn0036967 626.6566667 51.31333333 78.75333333 0.019947127 0.243601403 0.15872344 0 0 0 0.01 dme-miR-184-5p 6mer3-8 TGATAA 3L 20313245 20313250 + 3L_20313245_20313250_+ 1 1 1 0 polo FBtr0074839 20312872 20313466 3L + 20313221 20313275 3'utr polo FlyBase G31693.1 AATGCCTATATTCACCGAGGTGACTGATAACAAAATTTTAATGCTGGATACATTA 15 20313262 0.779424953 6 15 96 1 1.255272505 0.055555556 0.133333333 0.277777778 15 0 0 18 3L:20313221-20313275 6 polo FBtr0074839 20312872 20313466 TGATAA 6mer3-8 dme-miR-184-5p 3L + 20313219 20313276 3'utr polo FlyBase G23964.1 GAAATGCCTATATTCACCGAGGTGACTGATAACAAAATTTTAATGCTGGATACATTAT 7 20313263 0.969561504 6 7 43 1 1.041392685 0.090909091 0.285714286 0.545454545 7 0 0 11 3L:20313219-20313276 6 5.5 2815 FBgn0003124 1841.773333 94.36 144.4 0.002986252 0.05828741 0.038088643 -17 -18 -17.5 0.01 dme-miR-995-5p 6mer2-7 ATTCGG 3L 20315602 20315607 + 3L_20315602_20315607_+ 1 0.961095885 0.980547942 0.027509353 alphaSnap FBtr0074840 20315546 20316577 3L + 20315586 20315617 3'utr alphaSnap FlyBase G31701.1 ATTTATTAAATGCTTTATTCGGTTCGGATATT 5 20315603 0.915970897 3 5 40 1 0.698970004 0.2 0 0 5 0 0 5 3L:20315586-20315617 6 alphaSnap FBtr0074840 20315546 20316577 ATTCGG 6mer2-7 dme-miR-995-5p 3L + 20315586 20315630 3'utr alphaSnap FlyBase G23971.1 ATTTATTAAATGCTTTATTCGGTTCGGATATTAATCTACCTATAC 7 20315602 0.950778799 4 5 70 0.888888889 0.903089987 0.555555556 0.285714286 0.444444444 7 1 0 8 3L:20315586-20315630 6 5 2816 FBgn0250791 959.9966667 56.11333333 85.60666667 0.005208351 0.089105382 0.058406666 -1 0 -0.5 0.01 dme-miR-277-3p 6mer3-8 TGCATT 3L 20315663 20315668 + 3L_20315663_20315668_+ 1 1 1 0 alphaSnap FBtr0074840 20315546 20316577 3L + 20315659 20315690 3'utr alphaSnap FlyBase G31702.1 GTGTTGCATTGCTTAACCTGAAAGCACCCAAA 5 20315669 0.96623756 3 4 27 0.8 0.602059991 0.2 0 0 5 1 0 4 3L:20315659-20315690 6 alphaSnap FBtr0074840 20315546 20316577 TGCATT 6mer3-8 dme-miR-277-3p 3L + 20315656 20315692 3'utr alphaSnap FlyBase G23972.1 AACGTGTTGCATTGCTTAACCTGAAAGCACCCAAACG 5 20315670 0.979214049 3 5 35 1 0.954242509 0.111111111 0.4 0.666666667 5 0 0 9 3L:20315656-20315692 6 4.5 2817 FBgn0250791 959.9966667 56.11333333 85.60666667 0.004687516 0.080194844 0.052566 -6 -7 -6.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 20381807 20381812 + 3L_20381807_20381812_+ 0.999999165 1 0.999999583 5.66E-07 RhoBTB FBtr0078185|FBtr0078185|FBtr0078185|FBtr0330158|FBtr0330158|FBtr0330158 20381697|20381697|20381697|20381697|20381697|20381697 20382398|20382398|20382398|20382398|20382398|20382398 3L + 20381795 20381849 3'utr RhoBTB FlyBase G31742.1 ACTGCGCTTCATTGTGATCCTGCCGGTCCTGATCTGTTTTATCTGTACGATTTTA 13 20381831 0.949092251 9 13 113 1 1.113943352 0.230769231 0 0 13 0 0 13 3L:20381795-20381849 6 RhoBTB FBtr0330158|FBtr0330158|FBtr0330158|FBtr0078185|FBtr0078185|FBtr0078185 20381697|20381697|20381697|20381697|20381697|20381697 20382398|20382398|20382398|20382398|20382398|20382398 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 20381790 20381834 intron-3'utr RhoBTB FlyBase G23998.1 AGATCACTGCGCTTCATTGTGATCCTGCCGGTCCTGATCTGTTTT 10 20381808 0.966109253 4 10 83 1 1.204119983 0.1875 0.4 0.625 10 0 0 16 3L:20381790-20381834 6 8 2818 FBgn0036980 400.9966667 15.65333333 23.82333333 0.019950291 0.511073254 0.335805233 -24 -1 -12.5 0.01 dme-miR-277-3p 6mer2-7 GCATTT 3L 20382142 20382147 + 3L_20382142_20382147_+ 1 1 1 0 RhoBTB FBtr0078185|FBtr0330157|FBtr0330158 20381697|20381881|20381697 20382398|20382398|20382398 3L + 20382113 20382180 3'utr RhoBTB FlyBase G31744.1 TGTATGCACATGCACCTCGGCGCTGCGAAGCATTTCGCTGTATTGCCTTACGATATATCGGTGTACAC 9 20382156 0.806038364 5 7 51 0.9 0.653212514 0.2 0.111111111 0.2 9 0 1 9 3L:20382113-20382180 6 RhoBTB FBtr0330158|FBtr0078185|FBtr0330157 20381697|20381697|20381881 20382398|20382398|20382398 GCATTT 6mer2-7 dme-miR-277-3p 3L + 20382123 20382181 3'utr RhoBTB FlyBase G24001.1 TGCACCTCGGCGCTGCGAAGCATTTCGCTGTATTGCCTTACGATATATCGGTGTACACT 6 20382146 0.983724521 3 5 50 1 1.146128036 0 0.833333333 0.928571429 6 0 0 14 3L:20382123-20382181 6 4 2819 FBgn0036980 400.9966667 15.65333333 23.82333333 0.009975145 0.255536627 0.167902616 -14 -4 -9 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 20382257 20382262 + 3L_20382257_20382262_+ 1 1 1 0 RhoBTB FBtr0078185|FBtr0330157|FBtr0330158 20381697|20381881|20381697 20382398|20382398|20382398 3L + 20382186 20382292 3'utr RhoBTB FlyBase G31744.2 TTGTTCTGCACGATCCCTCCCATGGAATGTGGACAGCCGAAGGACGCAGACATGTGTATATCCATATATTTGTACCTTTACCTAAGACATGTATGTATGTATATTTT 19 20382265 0.893786405 13 18 165 0.954545455 1.021189299 0.181818182 0.157894737 0.272727273 19 0 1 21 3L:20382186-20382292 6 RhoBTB FBtr0330158|FBtr0078185|FBtr0330157 20381697|20381697|20381881 20382398|20382398|20382398 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 20382247 20382284 3'utr RhoBTB FlyBase G24002.1 CCATATATTTGTACCTTTACCTAAGACATGTATGTATG 10 20382263 0.601295405 4 8 89 0.857142857 0.77815125 0.571428571 0.4 0.571428571 10 1 1 12 3L:20382247-20382284 6 10 2820 FBgn0036980 400.9966667 15.65333333 23.82333333 0.024937863 0.638841567 0.419756541 -8 -6 -7 0.01 dme-miR-1002-5p 7mer-m8 CTACTTA 3L 20382300 20382306 + 3L_20382300_20382306_+ 0.592480863 0.592464544 0.592472704 1.16E-05 RhoBTB FBtr0078185|FBtr0330157|FBtr0330158 20381697|20381881|20381697 20382398|20382398|20382398 3L + 20382293 20382340 3'utr RhoBTB FlyBase G31745.1 TGAATTCCTACTTACGGAAACATTTGTCTAGCCATAGCTCTAAGCAAT 25 20382317 0.87279616 7 22 169 0.892857143 1.397940009 0.071428571 0.08 0.178571429 25 3 0 25 3L:20382293-20382340 7 RhoBTB FBtr0330158|FBtr0078185|FBtr0330157 20381697|20381697|20381881 20382398|20382398|20382398 CTACTTA 7mer-m8 dme-miR-1002-5p 3L + 20382301 20382372 3'utr RhoBTB FlyBase G24003.1 TACTTACGGAAACATTTGTCTAGCCATAGCTCTAAGCAATTCTCTACGATAAGGACGCATTTTGTACAGAAT 15 20382316 0.97638676 7 14 100 1 1.414973348 0.076923077 0.4 0.653846154 15 0 0 26 3L:20382301-20382372 5 7 2821 FBgn0036980 400.9966667 15.65333333 23.82333333 0.017456504 0.447189097 0.293829579 -17 -16 -16.5 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 20391198 20391203 + 3L_20391198_20391203_+ 1 1 1 0 fbl FBtr0307392|FBtr0078189|FBtr0307393|FBtr0078186|FBtr0078190|FBtr0078187|FBtr0078188 20391181|20391181|20391181|20391181|20391181|20391181|20391181 20391454|20391913|20391913|20391454|20391454|20391913|20391454 3L + 20391166 20391225 stop_codon fbl FlyBase G31756.1 AACACTCCACTAGATAGTCGCTATAACCACATGTTCCTCCCAAGGGCACCCAACGTGCGC 105 20391197 0.78491325 4 105 522 1 2.06069784 0.060869565 0.095238095 0.173913043 105 0 0 115 3L:20391166-20391225 6 fbl FBtr0078187|FBtr0078188|FBtr0078190|FBtr0307393|FBtr0078186|FBtr0307392|FBtr0078189 20391181|20391181|20391181|20391181|20391181|20391181|20391181 20391913|20391454|20391454|20391913|20391454|20391454|20391913 GTTCCT 6mer2-7 dme-miR-276a-3p 3L + 20391167 20391229 stop_codon fbl FlyBase G24012.1 ACACTCCACTAGATAGTCGCTATAACCACATGTTCCTCCCAAGGGCACCCAACGTGCGCCAGC 58 20391197 0.919911695 3 58 296 1 1.963787827 0.054347826 0.379310345 0.608695652 58 0 0 92 3L:20391167-20391229 6 80.5 2822 FBgn0011205 689.3733333 36.86333333 56.25 0.116772721 2.183741749 1.431111111 1 1 1 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA 3L 20391357 20391362 + 3L_20391357_20391362_+ 1 1 1 0 fbl FBtr0307392|FBtr0078189|FBtr0307393|FBtr0078186|FBtr0078190|FBtr0078187|FBtr0078188 20391181|20391181|20391181|20391181|20391181|20391181|20391181 20391454|20391913|20391913|20391454|20391454|20391913|20391454 3L + 20391329 20391357 3'utr fbl FlyBase G31758.1 TAATTCTTTCTCGGCTTTAGTTGTAACTT 5 20391345 0.740624447 3 5 59 1 0.698970004 0.2 0 0 5 0 0 5 3L:20391329-20391357 1 fbl FBtr0078187|FBtr0078188|FBtr0078190|FBtr0307393|FBtr0078186|FBtr0307392|FBtr0078189 20391181|20391181|20391181|20391181|20391181|20391181|20391181 20391913|20391454|20391454|20391913|20391454|20391454|20391913 TGATGA 6mer3-8 dme-miR-2a-2-5p 3L + 20391314 20391366 3'utr fbl FlyBase G24014.1 TCTCGGTATTTATCGTAATTCTTTCTCGGCTTTAGTTGTAACTTGATGACGCA 8 20391345 0.991382974 6 7 73 1 1.041392685 0.090909091 0.375 0.545454545 8 0 0 11 3L:20391314-20391366 6 5.5 2823 FBgn0011205 689.3733333 36.86333333 56.25 0.00797826 0.149199747 0.097777778 12 12 12 0.01 dme-miR-968-5p 7mer-A1 CTACTTA 3L 20391837 20391843 + 3L_20391837_20391843_+ 0.823349268 0.823349534 0.823349401 1.41E-07 fbl FBtr0078189|FBtr0307393|FBtr0078187 20391181|20391181|20391181 20391913|20391913|20391913 3L + 20391786 20391914 3'utr fbl FlyBase G31761.1 TGATGATACAGTTTAAAAACAAGACGGTAATAGCCTTCTCTCTACCTTTGCCTACTTATACAATTATTGTTAAGGTTTGTGTTATTCTAAAAAAATTCCGTAATAAACTAGACACGAGTTGTTCTGATA 32 20391834 0.987834736 12 29 259 0.911111111 1.135662602 0.155555556 0.28125 0.488888889 32 2 2 41 3L:20391786-20391914 7 fbl FBtr0078187|FBtr0307393|FBtr0078189 20391181|20391181|20391181 20391913|20391913|20391913 CTACTTA 7mer-A1 dme-miR-968-5p 3L + 20391797 20391839 3'utr fbl FlyBase G24017.1 TTTAAAAACAAGACGGTAATAGCCTTCTCTCTACCTTTGCCTA 12 20391834 0.986940158 2 11 97 0.941176471 0.903089987 0.058823529 0.25 0.470588235 12 0 1 16 3L:20391797-20391839 3 12.5 2824 FBgn0011205 689.3733333 36.86333333 56.25 0.01813241 0.339090334 0.222222222 3 3 3 0.01 dme-miR-1008-3p 7mer-A1 GCTGTGA 3L 20428169 20428175 - 3L_20428169_20428175_- 0.820821045 0.823306007 0.822063526 0.00175716 CG5262 FBtr0078230|FBtr0310615 20428098|20427960 20428352|20428352 3L - 20428141 20428206 3'utr CG5262 FlyBase G38672.1 ATTTTAGCAACGTAAGTCAGTATTGAAATCGGCTGTGACACAAATTTTCAATATATTTTTTATATA 101 20428184 0.969421902 9 92 650 0.920353982 1.539912085 0.10619469 0.118811881 0.212389381 101 7 2 104 3L:20428141-20428206 7 CG5262 FBtr0078230|FBtr0310615 20428098|20427960 20428352|20428352 GCTGTGA 7mer-A1 dme-miR-1008-3p 3L - 20428151 20428213 3'utr CG5262 FlyBase G29203.1 TAATCGAATTTTAGCAACGTAAGTCAGTATTGAAATCGGCTGTGACACAAATTTTCAATATAT 69 20428182 0.673608042 10 59 430 0.845360825 1.135662602 0.257731959 0.31884058 0.515463918 69 10 5 82 3L:20428151-20428213 7 77 2825 FBgn0036988 148.2966667 9.42 14.41 0.519229472 8.174097665 5.34351145 9 7 8 0.01 dme-miR-970-3p 6mer3-8 TCTTAT 3L 20428343 20428348 - 3L_20428343_20428348_- 1 1 1 0 CG5262 FBtr0078230|FBtr0310615 20428098|20427960 20428352|20428352 3L - 20428326 20428354 stop_codon CG5262 FlyBase G38673.1 AAGTTATCTTATCTGCCAATGTGGAGATA 5 20428346 0.591025554 4 5 37 1 0.698970004 0 0 0 5 0 0 5 3L:20428326-20428354 6 CG5262 FBtr0078230|FBtr0310615 20428098|20427960 20428352|20428352 TCTTAT 6mer3-8 dme-miR-970-3p 3L - 20428329 20428354 stop_codon CG5262 FlyBase G29205.1 AAGTTATCTTATCTGCCAATGTGGAG 6 20428346 0.683066354 3 5 38 0.6 0.77815125 0 0.333333333 0.6 6 4 0 6 3L:20428329-20428354 6 5 2826 FBgn0036988 148.2966667 9.42 14.41 0.0337162 0.530785563 0.346981263 -2 -2 -2 0.01 dme-miR-252-5p 8mer-m1 GTACTTAG 3L 20450494 20450501 + 3L_20450494_20450501_+ 0.636789085 0.636789085 0.636789085 0 CG5910 FBtr0300411|FBtr0078195 20450395|20450395 20450580|20450580 3L + 20450459 20450521 3'utr CG5910 FlyBase G31807.1 AAGTAGGATCTAGTCGTAGTAGCATTCAAATAAGTGTACTTAGTTCAACAAATGTCCAGTGGT 7 20450498 0.897652122 5 6 40 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 3L:20450459-20450521 8 CG5910 FBtr0300411|FBtr0078195 20450395|20450395 20450580|20450580 GTACTTAG 8mer-m1 dme-miR-252-5p 3L + 20450455 20450514 3'utr CG5910 FlyBase G24046.1 AGAGAAGTAGGATCTAGTCGTAGTAGCATTCAAATAAGTGTACTTAGTTCAACAAATGTC 7 20450498 0.983702598 5 5 41 0.75 0.77815125 0.375 0.142857143 0.25 7 2 0 6 3L:20450455-20450514 8 3 2827 FBgn0036993 5.333333333 0.613333333 0.916666667 0.5625 4.891304348 3.272727273 -4 -4 -4 0.01 dme-miR-8-3p 6mer2-7 AGTATT 3L 20469711 20469716 - 3L_20469711_20469716_- 1 1 1 0 CG32428 FBtr0303381 20469672 20469796 3L - 20469700 20469747 3'utr CG32428 FlyBase G38694.1 AAGCTGTCGCAAACTAAAGGTGCTTACCAATAGTATTTGAGTTCGAAT 18 20469710 0.700257765 5 18 119 1 1.380211242 0.416666667 0.166666667 0.375 18 0 0 24 3L:20469700-20469747 6 CG32428 FBtr0303381 20469672 20469796 AGTATT 6mer2-7 dme-miR-8-3p 3L - 20469696 20469747 3'utr CG32428 FlyBase G29214.1 AAGCTGTCGCAAACTAAAGGTGCTTACCAATAGTATTTGAGTTCGAATAAAC 14 20469710 0.687443341 5 13 95 1 1.301029996 0.3 0.285714286 0.5 14 0 0 20 3L:20469696-20469747 6 11.5 2828 FBgn0052428 469.8933333 37.72333333 57.65 0.024473639 0.304851109 0.199479618 -6 -6 -6 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 20470525 20470532 - 3L_20470525_20470532_- 0.500120318 0.500120318 0.500120318 0 CG32428 FBtr0300452 20470021 20470894 3L - 20470514 20470556 3'utr CG32428 FlyBase G38700.1 TAAGTCGAACATCGAACATAAACTGTACTTAACTACCTAAAGA 170 20470533 0.821063557 3 170 1032 1 2.322219295 0.161904762 0.205882353 0.357142857 170 0 0 210 3L:20470514-20470556 8 CG32428 FBtr0300452 20470021 20470894 GTACTTAA 8mer-A1 dme-miR-252-5p 3L - 20470447 20470555 3'utr CG32428 FlyBase G29219.1 AAGTCGAACATCGAACATAAACTGTACTTAACTACCTAAAGAATTGAAATACGTAATTAATTTCAAAAAGTAATAGTTAGACCTGCGAAACATTGCAATCACAAAAAAG 141 20470533 0.97224245 7 141 838 1 2.274157849 0.143617021 0.29787234 0.473404255 141 0 0 188 3L:20470447-20470555 8 153.5 2829 FBgn0052428 469.8933333 37.72333333 57.65 0.326669883 4.069099585 2.662619254 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 20510939 20510944 + 3L_20510939_20510944_+ 1 1 1 0 CG32425 FBtr0113436|FBtr0078204 20510792|20510792 20511058|20511058 3L + 20510919 20510959 3'utr CG32425 FlyBase G31834.1 ACAACAAATGCTATACAAATACCAAATCTACACGAGCCGCC 16 20510938 0.940333725 2 14 66 0.888888889 1.204119983 0.055555556 0.125 0.222222222 16 2 0 16 3L:20510919-20510959 6 CG32425 FBtr0078204|FBtr0113436 20510792|20510792 20511058|20511058 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 20510891 20510983 3'utr CG32425 FlyBase G24063.1 ACAACTACCAATTCTACCACCAAGCAGAACAACAAATGCTATACAAATACCAAATCTACACGAGCCGCCCACAACCACGCCCACGCCTCCTGC 11 20510938 0.938303452 5 11 43 1 1.176091259 0 0.363636364 0.533333333 11 0 0 15 3L:20510891-20510983 6 11.5 2830 FBgn0052425 913.0466667 51.64333333 79.68666667 0.012595194 0.222681211 0.144315235 1 1 1 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3L 20514032 20514037 + 3L_20514032_20514037_+ 0.998885772 1 0.999442886 0.000787858 CG32425 FBtr0078205|FBtr0078202|FBtr0078203 20513685|20513685|20513685 20514107|20514107|20514107 3L + 20514003 20514081 3'utr CG32425 FlyBase G31838.1 CCACACGGAATATGTATTAGTTTCGGAACTGTGTTAATCACCTAAGTATTTAGACACTATTACCTAATAAAACTTTAAA 26 20514035 0.976145597 10 21 220 0.8 1.079181246 0.033333333 0.153846154 0.266666667 26 5 1 24 3L:20514003-20514081 6 CG32425 FBtr0078202|FBtr0078205|FBtr0078203 20513685|20513685|20513685 20514107|20514107|20514107 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 20513997 20514045 3'utr CG32425 FlyBase G24070.1 CAGCAACCACACGGAATATGTATTAGTTTCGGAACTGTGTTAATCACCT 8 20514023 0.982026513 7 8 60 1 1.113943352 0 0.5 0.692307692 8 0 0 13 3L:20513997-20514045 6 12 2831 FBgn0052425 913.0466667 51.64333333 79.68666667 0.013142811 0.232363003 0.15058981 -3 9 3 0.01 dme-miR-980-3p 6mer3-8 GGCAGC 3L 20515006 20515011 - 3L_20515006_20515011_- 1 1 1 0 CG5059 FBtr0331567|FBtr0078217|FBtr0078219|FBtr0078218|FBtr0078216 20514596|20514597|20514596|20514596|20514597 20515331|20515331|20515331|20515331|20515331 3L - 20514965 20515038 3'utr CG5059 FlyBase G38709.1 AATTTTATATATTTAACATTATATCAAGGCAGCAAATCTAATGATACAGAAAAGCATTTATAGATGCTCCATAT 52 20514999 0.679503473 12 46 290 0.888888889 1.271066772 0 0.134615385 0.285714286 52 5 2 56 3L:20514965-20515038 6 CG5059 FBtr0078218|FBtr0078216|FBtr0078217|FBtr0078219|FBtr0331567 20514596|20514597|20514597|20514596|20514596 20515331|20515331|20515331|20515331|20515331 GGCAGC 6mer3-8 dme-miR-980-3p 3L - 20514967 20515036 3'utr CG5059 FlyBase G29226.1 TTTTATATATTTAACATTATATCAAGGCAGCAAATCTAATGATACAGAAAAGCATTTATAGATGCTCCAT 38 20514998 0.69539842 10 34 208 0.93442623 1.755874856 0 0.315789474 0.573770492 38 4 0 57 3L:20514967-20515036 6 38 2832 FBgn0037007 1992.566667 140.1466667 214.2533333 0.01907088 0.271144515 0.177360134 -12 -13 -12.5 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 3L 20522335 20522340 + 3L_20522335_20522340_+ 1 1 1 0 CG5104 FBtr0078209 20522285 20522434 3L + 20522253 20522345 stop_codon CG5104 FlyBase G31841.1 CAAGAAGACCATGTCGGCAATTCTGGAGGTCTAGAATCAGATGCGCTTCTGTACATAGCTCGAGAAAAGCCAGATTGGTTTGTAGCTTAAGCT 33 20522330 0.951204548 9 32 203 0.972972973 1.556302501 0.081081081 0.121212121 0.216216216 33 1 0 36 3L:20522253-20522345 6 CG5104 FBtr0078209 20522285 20522434 TAGCTT 6mer3-8 dme-miR-79-3p 3L + 20522308 20522348 3'utr CG5104 FlyBase G24073.1 TAGCTCGAGAAAAGCCAGATTGGTTTGTAGCTTAAGCTAAG 6 20522333 0.987090027 5 5 45 0.875 0.84509804 0.25 0.333333333 0.5 6 1 0 7 3L:20522308-20522348 6 5 2833 FBgn0037009 110.6666667 17.72 26.85333333 0.045180723 0.282167043 0.186196624 5 2 3.5 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 3L 20528355 20528361 - 3L_20528355_20528361_- 0.823349558 0.815890353 0.819619955 0.005274451 Rcd2 FBtr0078213 20527970 20528448 3L - 20528287 20528397 3'utr Rcd2 FlyBase G38736.1 GTTCGTTTTTTCTCTGTGTGAATTCCATCCTCCTGCAGACTGATTTTTGATCTTAAAAATTATACCAAAACAGTGGATGAAGTCTGCATGATAGTACTACTTAGGAAAAGA 86 20528375 0.82865289 11 82 749 0.958762887 1.968482949 0.195876289 0.11627907 0.216494845 86 4 0 93 3L:20528287-20528397 7 Rcd2 FBtr0078213 20527970 20528448 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 20528287 20528395 3'utr Rcd2 FlyBase G29246.1 TCGTTTTTTCTCTGTGTGAATTCCATCCTCCTGCAGACTGATTTTTGATCTTAAAAATTATACCAAAACAGTGGATGAAGTCTGCATGATAGTACTACTTAGGAAAAGA 62 20528375 0.820449168 12 60 514 0.946808511 1.949390007 0.127659574 0.35483871 0.574468085 62 5 0 89 3L:20528287-20528395 7 43 2834 FBgn0037012 147 7.983333333 12.26333333 0.292517007 5.386221294 3.506387605 14 14 14 0.01 dme-bantam-3p 8mer-A1 TGATCTCA 3L 20743899 20743906 + 3L_20743899_20743906_+ 0.631136385 0.631136385 0.631136385 0 CG13252 FBtr0078245 20743657 20744508 3L + 20743879 20743927 3'utr CG13252 FlyBase G31851.1 TGCCTTTATTTGTTTGGTATTGATCTCATTTAAACTTTTCACTCTTCAC 98 20743898 0.623514127 15 96 1093 0.983870968 1.785329835 0 0.214285714 0.379032258 98 1 1 122 3L:20743879-20743927 8 CG13252 FBtr0078245 20743657 20744508 TGATCTCA 8mer-A1 dme-bantam-3p 3L + 20743882 20743917 3'utr CG13252 FlyBase G24078.1 CTTTATTTGTTTGGTATTGATCTCATTTAAACTTTT 68 20743898 0.624469351 9 65 742 0.96875 1.491361694 0 0.294117647 0.5 68 1 2 93 3L:20743882-20743917 8 82.5 2835 FBgn0037016 248.3333333 12.01 18.50666667 0.332214765 6.869275604 4.457853026 1 1 1 0.01 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 20768379 20768386 - 3L_20768379_20768386_- 0.668734347 0.668734347 0.668734347 0 CG4074 FBtr0345811|FBtr0078280 20768205|20768340 20768406|20768406 3L - 20768362 20768405 3'utr CG4074 FlyBase G38739.1 CAAATAAACTTTCCAATATGGCAGCTATTTTATGAACATAAAAG 51 20768388 0.872123206 5 51 442 1 1.799340549 0 0.137254902 0.301587302 51 0 0 63 3L:20768362-20768405 8 CG4074 FBtr0345811|FBtr0078280 20768205|20768340 20768406|20768406 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L - 20768360 20768404 3'utr CG4074 FlyBase G29248.1 AAATAAACTTTCCAATATGGCAGCTATTTTATGAACATAAAAGTT 28 20768387 0.979479987 4 25 256 0.888888889 1.204119983 0 0.285714286 0.444444444 28 3 1 32 3L:20768360-20768404 8 39.5 2836 FBgn0037017 21.33333333 2.336666667 3.576666667 1.8515625 16.90442225 11.04380242 2 1 1.5 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 3L 20776856 20776861 - 3L_20776856_20776861_- 1 1 1 0 Pex16 FBtr0078278 20776764 20777068 3L - 20776853 20776882 3'utr Pex16 FlyBase G38743.2 TGGCATTGCCGCTCTTGAGGTGAAAAATGA 8 20776867 0.827523807 2 7 34 1 1 0.2 0.25 0.4 8 0 0 10 3L:20776853-20776882 6 Pex16 FBtr0078278 20776764 20777068 GAAAAA 6mer3-8 dme-miR-980-5p 3L - 20776802 20776877 3'utr Pex16 FlyBase G29250.1 TTGCCGCTCTTGAGGTGAAAAATGATTATACATCCCAATTGCTTTGTATGGCTTTTTAAATTATATATGGAACAAT 10 20776867 0.901569698 5 10 93 1 1.146128036 0.142857143 0.4 0.571428571 10 0 0 14 3L:20776802-20776877 6 5.5 2837 FBgn0037019 162.54 13.71666667 20.82 0.033837825 0.400972053 0.264169068 6 6 6 0.01 dme-miR-282-5p 6mer2-7 GAGGCT 3L 20780121 20780126 + 3L_20780121_20780126_+ 1 1 1 0 Pex14 FBtr0078251 20780105 20780378 3L + 20780062 20780143 stop_codon Pex14 FlyBase G31875.1 GAGGTGGTCACCAAGAATAGTGACTCCAGCTTGGAGATCATGTAATGCAATCAGAATACGAGGCTGGCTATATAGACGTAGT 11 20780131 0.973522203 7 10 62 0.866666667 1.113943352 0.066666667 0.272727273 0.466666667 11 2 0 13 3L:20780062-20780143 6 Pex14 FBtr0078251 20780105 20780378 GAGGCT 6mer2-7 dme-miR-282-5p 3L + 20780091 20780144 stop_codon Pex14 FlyBase G24092.1 CTTGGAGATCATGTAATGCAATCAGAATACGAGGCTGGCTATATAGACGTAGTA 7 20780131 0.978518441 4 6 42 0.941176471 1.204119983 0.235294118 0.571428571 0.823529412 7 1 0 16 3L:20780091-20780144 6 5 2838 FBgn0037020 373.37 37.02333333 56.88333333 0.013391542 0.135049968 0.087899209 -10 -10 -10 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3L 20780187 20780192 + 3L_20780187_20780192_+ 1 1 1 0 Pex14 FBtr0078251 20780105 20780378 3L + 20780154 20780321 3'utr Pex14 FlyBase G31876.1 GCTGTAAATTGAGTTTCCCCGTTAAATGCCTTCAAGACTTTTGGTTTTTTTTCTTTGCGTTTATAGCATTTAAGGTTTCTTTATAGTCAACAGCTAATCCATATCCAAAAGTACATACACACACTCACATATACACACTTATGCGATACGATGTCTATACAATGTAAT 55 20780208 0.991396945 15 53 567 0.938461538 1.785329835 0.338461538 0.145454545 0.276923077 55 4 0 61 3L:20780154-20780321 6 Pex14 FBtr0078251 20780105 20780378 AAGACT 6mer3-8 dme-miR-14-3p 3L + 20780174 20780248 3'utr Pex14 FlyBase G24093.1 GTTAAATGCCTTCAAGACTTTTGGTTTTTTTTCTTTGCGTTTATAGCATTTAAGGTTTCTTTATAGTCAACAGCT 31 20780194 0.754003682 9 31 323 1 1.662757832 0.369565217 0.35483871 0.565217391 31 0 0 46 3L:20780174-20780248 6 15.5 2839 FBgn0037020 373.37 37.02333333 56.88333333 0.04151378 0.418654902 0.272487548 -21 -7 -14 0.01 dme-miR-277-3p 6mer2-7 GCATTT 3L 20780381 20780386 - 3L_20780381_20780386_- 1 1 1 0 CG11399 FBtr0078277 20780348 20781657 3L - 20780331 20780397 3'utr CG11399 FlyBase G38749.1 AACTACACAAAGCATTTTTGCGCTTAATTAAACAGTTTCTTTCAATTCAAACCTGTTATTATGTAAA 26 20780380 0.690028668 7 25 217 0.965517241 1.447158031 0.034482759 0.115384615 0.206896552 26 1 0 28 3L:20780331-20780397 6 CG11399 FBtr0078277 20780348 20781657 GCATTT 6mer2-7 dme-miR-277-3p 3L - 20780365 20780399 3'utr CG11399 FlyBase G29253.1 AAAACTACACAAAGCATTTTTGCGCTTAATTAAAC 24 20780380 0.674359685 6 24 197 1 1.591064607 0 0.458333333 0.666666667 24 0 0 39 3L:20780365-20780399 6 22.5 2840 FBgn0037021 631 17.94666667 27.51333333 0.035657686 1.25371471 0.817785316 -6 -6 -6 0.01 dme-miR-33-5p 6mer2-7 AATGCA 3L 20780944 20780949 - 3L_20780944_20780949_- 1 1 1 0 CG11399 FBtr0078277 20780348 20781657 3L - 20780872 20781044 3'utr CG11399 FlyBase G38750.2 GAAATAGCTGATAAAAATGCCGGCCTGGCCGCTGTTTATCTTATACGATTGTACCCAACAAACAAGGGCCAAGCTACCCAACAAAAGACTCTAATAATGCATACATAGTATGGGTAGGGGTACTGTTCTCTATCCTTGTTTCAGGGTATTTCGCAATGGTTTGTCCATTCACA 46 20780952 0.963992638 14 44 213 0.962264151 1.707570176 0.169811321 0.130434783 0.245283019 46 2 0 51 3L:20780872-20781044 6 CG11399 FBtr0078277 20780348 20781657 AATGCA 6mer2-7 dme-miR-33-5p 3L - 20780940 20781000 3'utr CG11399 FlyBase G29255.1 ACGATTGTACCCAACAAACAAGGGCCAAGCTACCCAACAAAAGACTCTAATAATGCATACA 18 20780952 0.913435509 5 18 59 1 1.531478917 0.147058824 0.444444444 0.705882353 18 0 0 34 3L:20780940-20781000 6 10 2841 FBgn0037021 631 17.94666667 27.51333333 0.015847861 0.557206538 0.363460141 3 3 3 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT 3L 20781099 20781105 - 3L_20781099_20781105_- 0.658999527 0.658999527 0.658999527 0 CG11399 FBtr0078277 20780348 20781657 3L - 20781061 20781162 3'utr CG11399 FlyBase G38751.1 ATTTTTGTACTTCTTGTCAAAGCTTTAATTTTCAAACGTACACAGTGCTCGGCCTTTGGCAGCTGGTATTGCCCCCATCGCAAGGTATAATTAATTGTAAAT 138 20781106 0.771048009 16 137 943 0.993975904 2.217483944 0.186746988 0.173913043 0.313253012 138 1 0 165 3L:20781061-20781162 7 CG11399 FBtr0078277 20780348 20781657 GGCAGCT 7mer-m8 dme-miR-980-3p 3L - 20781061 20781126 3'utr CG11399 FlyBase G29256.1 CGTACACAGTGCTCGGCCTTTGGCAGCTGGTATTGCCCCCATCGCAAGGTATAATTAATTGTAAAT 102 20781106 0.773926277 7 102 651 1 2.204119983 0.2625 0.352941176 0.5875 102 0 0 160 3L:20781061-20781126 7 110 2842 FBgn0037021 631 17.94666667 27.51333333 0.174326466 6.129271917 3.998061546 1 1 1 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG 3L 20813052 20813057 + 3L_20813052_20813057_+ 1 1 1 0 HIPP1 FBtr0078256|FBtr0331524|FBtr0331525|FBtr0331526 20812877|20812877|20812877|20812877 20813332|20813332|20813332|20813332 3L + 20813038 20813070 3'utr HIPP1 FlyBase G31915.1 TGTAAAGTACGAACGCTGTGTAAATTGTAAGAA 9 20813058 0.712759545 2 8 41 0.888888889 0.903089987 0.222222222 0 0 9 1 0 8 3L:20813038-20813070 6 HIPP1 FBtr0331526|FBtr0331525|FBtr0331524|FBtr0078256 20812877|20812877|20812877|20812877 20813332|20813332|20813332|20813332 GCTGTG 6mer2-7 dme-miR-1008-3p 3L + 20813035 20813069 3'utr HIPP1 FlyBase G24118.1 CATTGTAAAGTACGAACGCTGTGTAAATTGTAAGA 7 20813056 0.675640279 3 6 39 1 1.146128036 0 0.571428571 0.785714286 7 0 0 14 3L:20813035-20813069 6 7 2843 FBgn0037027 1180 42.52 65.28666667 0.005932203 0.16462841 0.107219442 -6 -4 -5 0.01 dme-miR-970-3p 6mer3-8 TCTTAT 3L 20839152 20839157 - 3L_20839152_20839157_- 1 1 1 0 CSN3 FBtr0078269 20839094 20839324 3L - 20839123 20839182 3'utr CSN3 FlyBase G38790.1 CAGCTACCACAACAACAAACTGCGCTCTTATTGCAAATTTAAAGATGAACATGCTATTTT 12 20839155 0.97654121 4 12 78 1 1.176091259 0 0.166666667 0.333333333 12 0 0 15 3L:20839123-20839182 6 CSN3 FBtr0078269 20839094 20839324 TCTTAT 6mer3-8 dme-miR-970-3p 3L - 20839119 20839174 3'utr CSN3 FlyBase G29289.1 ACAACAACAAACTGCGCTCTTATTGCAAATTTAAAGATGAACATGCTATTTTAAAT 9 20839155 0.976491235 4 9 59 1 1.079181246 0 0.222222222 0.416666667 9 0 0 12 3L:20839119-20839174 6 9.5 2844 FBgn0027055 526.47 38.38666667 58.78666667 0.018044713 0.247481765 0.16160127 -2 -2 -2 0.01 dme-miR-31a-5p 6mer3-8 TCTTGC 3L 20839197 20839202 - 3L_20839197_20839202_- 1 1 1 0 CSN3 FBtr0078269 20839094 20839324 3L - 20839187 20839266 3'utr CSN3 FlyBase G38791.1 ATCCCCAACACCGTTTACCAGAACTTGTCGAAGCCGCGAGGCCCTGGGCCCGAAAGCTGACGTCTCTTGCAGTCCGTACT 8 20839200 0.964220181 6 8 42 1 0.903089987 0 0 0 8 0 0 8 3L:20839187-20839266 6 CSN3 FBtr0078269 20839094 20839324 TCTTGC 6mer3-8 dme-miR-31a-5p 3L - 20839185 20839237 3'utr CSN3 FlyBase G29290.1 GAAGCCGCGAGGCCCTGGGCCCGAAAGCTGACGTCTCTTGCAGTCCGTACTCA 6 20839209 0.914893565 3 5 19 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 3L:20839185-20839237 6 4 2845 FBgn0027055 526.47 38.38666667 58.78666667 0.007597774 0.104202848 0.06804264 -2 7 2.5 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 3L 20926200 20926205 - 3L_20926200_20926205_- 1 1 1 0 fng FBtr0078267 20925889 20926399 3L - 20926180 20926226 3'utr fng FlyBase G38802.1 ATGTAGCAATACGCTGGACAGATGTGCTTCCTAATGGTATAAGTAAT 25 20926204 0.880622983 3 25 169 1 1.447158031 0.214285714 0.12 0.214285714 25 0 0 28 3L:20926180-20926226 6 fng FBtr0078267 20925889 20926399 ATGTGC 6mer3-8 dme-miR-305-3p 3L - 20926182 20926226 3'utr fng FlyBase G29296.1 ATGTAGCAATACGCTGGACAGATGTGCTTCCTAATGGTATAAGTA 20 20926204 0.828915419 4 20 120 1 1.447158031 0.178571429 0.4 0.571428571 20 0 0 28 3L:20926182-20926226 6 21.5 2846 FBgn0011591 7.356666667 0.46 0.71 2.922519257 46.73913043 30.28169014 -1 -1 -1 0.01 dme-miR-308-3p 8mer-m1 CTGTGATT 3L 20926278 20926285 - 3L_20926278_20926285_- 0.385560641 0.385560641 0.385560641 0 fng FBtr0078267 20925889 20926399 3L - 20926265 20926302 3'utr fng FlyBase G38803.1 AAAATCAAATCTCGCCACTGTGATTTAACATTAAGTTT 62 20926278 0.732766937 6 58 473 0.947368421 1.556302501 0.013157895 0.161290323 0.315789474 62 3 1 72 3L:20926265-20926302 8 fng FBtr0078267 20925889 20926399 CTGTGATT 8mer-m1 dme-miR-308-3p 3L - 20926264 20926380 3'utr fng FlyBase G29297.1 AGGTCCCTGGGGATCCTATTTGGCTGTTGCAGGCGCACGTCTGCACTGGGTCGGTTGTGAACCGCTGGGGCAGGCGTCAAAATCAAATCTCGCCACTGTGATTTAACATTAAGTTTA 68 20926278 0.984855607 12 62 501 0.932038835 1.681241237 0.116504854 0.382352941 0.59223301 68 6 1 96 3L:20926264-20926380 8 56 2847 FBgn0011591 7.356666667 0.46 0.71 7.612143181 121.7391304 78.87323944 -7 -7 -7 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 3L 20994476 20994482 - 3L_20994476_20994482_- 0.778423481 0.782911824 0.780667653 0.003173707 skd FBtr0078328|FBtr0112830|FBtr0078329|FBtr0333284 20994129|20994129|20992812|20994129 20995703|20995703|20995703|20995703 3L - 20994463 20994526 3'utr skd FlyBase G38807.1 CACATAGCCAATTTTCTAATAATGGAATACTTAAACGAAAATGTGTACAAATTAATAATAACGA 8 20994485 0.982249178 5 7 57 0.888888889 0.602059991 0.333333333 0.125 0.222222222 8 0 1 8 3L:20994463-20994526 7 skd FBtr0078329|FBtr0333284|FBtr0078328|FBtr0112830 20992812|20994129|20994129|20994129 20995703|20995703|20995703|20995703 GTACAAA 7mer-A1 dme-miR-305-5p 3L - 20994465 20994498 3'utr skd FlyBase G29300.1 ACTTAAACGAAAATGTGTACAAATTAATAATAAC 8 20994485 0.958967905 2 8 41 1 1.041392685 0 0.375 0.545454545 8 0 0 11 3L:20994465-20994498 7 6.5 2848 FBgn0003415 2022.95 23.24 35.72666667 0.003213129 0.279690189 0.181936929 3 3 3 0.01 dme-miR-999-3p 7mer-m8 AGTTAAC 3L 20995128 20995134 - 3L_20995128_20995134_- 0.674514267 0.674514267 0.674514267 0 skd FBtr0078328|FBtr0112830|FBtr0078329|FBtr0333284 20994129|20994129|20992812|20994129 20995703|20995703|20995703|20995703 3L - 20995117 20995147 3'utr skd FlyBase G38812.1 AATAGCGGAGTGGAGTTAACGCGAGAAACAT 8 20995132 0.893418574 4 7 21 0.8 0.903089987 0.1 0.25 0.4 8 2 0 8 3L:20995117-20995147 7 skd FBtr0078329|FBtr0333284|FBtr0078328|FBtr0112830 20992812|20994129|20994129|20994129 20995703|20995703|20995703|20995703 AGTTAAC 7mer-m8 dme-miR-999-3p 3L - 20995119 20995155 3'utr skd FlyBase G29304.1 ATATATACAATAGCGGAGTGGAGTTAACGCGAGAAAC 5 20995133 0.948251958 3 5 18 1 0.954242509 0 0.6 0.777777778 5 0 0 9 3L:20995119-20995155 7 6.5 2849 FBgn0003415 2022.95 23.24 35.72666667 0.003213129 0.279690189 0.181936929 -2 -1 -1.5 0.01 dme-miR-304-5p 6mer3-8 TGAGAT 3L 20995209 20995214 - 3L_20995209_20995214_- 1 1 1 0 skd FBtr0078328|FBtr0112830|FBtr0078329|FBtr0333284 20994129|20994129|20992812|20994129 20995703|20995703|20995703|20995703 3L - 20995188 20995281 3'utr skd FlyBase G38813.1 TTATATATATACATAGGCTGGCGTTCGATTAGTGTTTAATATTTATAAATATACAAAGGGGAGCGAATGAGATAGCAAAAAGCAAACAACAACA 260 20995214 0.972717916 6 250 412 0.960573477 1.951013539 0.0609319 0.069498069 0.136200717 259 9 2 268 3L:20995188-20995281 6 skd FBtr0078329|FBtr0333284|FBtr0078328|FBtr0112830 20992812|20994129|20994129|20994129 20995703|20995703|20995703|20995703 TGAGAT 6mer3-8 dme-miR-304-5p 3L - 20995187 20995288 3'utr skd FlyBase G29305.1 TTTATTTTTATATATATACATAGGCTGGCGTTCGATTAGTGTTTAATATTTATAAATATACAAAGGGGAGCGAATGAGATAGCAAAAAGCAAACAACAACAA 138 20995214 0.973194287 9 133 269 0.970731707 2.298853076 0.126829268 0.333333333 0.551219512 138 6 0 199 3L:20995187-20995288 6 189.5 2850 FBgn0003415 2022.95 23.24 35.72666667 0.093675078 8.15404475 5.304161224 0 0 0 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 21074840 21074845 + 3L_21074840_21074845_+ 1 1 1 0 siz FBtr0078290|FBtr0301602|FBtr0078289|FBtr0111038 21074675|21074675|21074675|21074675 21075444|21075444|21075444|21075444 3L + 21074808 21074861 3'utr siz FlyBase G31948.1 CACAGCGTACGAGTATATAGTGAATTCTTAATGTTCCTTCGTTCTCTGCTAATA 29 21074839 0.99334016 3 26 322 0.914285714 1.505149978 0.057142857 0.206896552 0.342857143 29 3 0 32 3L:21074808-21074861 6 siz FBtr0078289|FBtr0111038|FBtr0078290|FBtr0301602 21074675|21074675|21074675|21074675 21075444|21075444|21075444|21075444 GTTCCT 6mer2-7 dme-miR-276a-3p 3L + 21074818 21074868 3'utr siz FlyBase G24146.1 GAGTATATAGTGAATTCTTAATGTTCCTTCGTTCTCTGCTAATATTAATGT 17 21074839 0.838481395 4 15 201 0.88 1.041392685 0 0.411764706 0.6 17 2 1 22 3L:21074818-21074868 6 22 2851 FBgn0026179 221.43 5.13 7.85 0.099354198 4.288499025 2.802547771 1 1 1 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3L 21136876 21136882 - 3L_21136876_21136882_- 0.661615511 0.661615511 0.661615511 0 Ac78C FBtr0330067|FBtr0301701|FBtr0333358|FBtr0330066|FBtr0305501 21136445|21136445|21136445|21136445|21136445 21137079|21137106|21137106|21137106|21137106 3L - 21136859 21136896 3'utr Ac78C FlyBase G38869.1 TATCTCAGCACAATTCTAGTCGTTAAACTTAAGAACTG 28 21136883 0.862302378 3 27 202 0.96875 1.491361694 0 0.107142857 0.21875 28 1 0 31 3L:21136859-21136896 7 Ac78C FBtr0305501|FBtr0330066|FBtr0333358|FBtr0301701|FBtr0330067 21136445|21136445|21136445|21136445|21136445 21137106|21137106|21137106|21137106|21137079 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3L - 21136861 21136899 3'utr Ac78C FlyBase G29348.1 ATTTATCTCAGCACAATTCTAGTCGTTAAACTTAAGAAC 17 21136883 0.848034139 2 17 130 1 1.414973348 0 0.352941176 0.576923077 17 0 0 26 3L:21136861-21136899 7 22.5 2852 FBgn0024150 386.8566667 7.673333333 11.87 0.058161076 2.932232841 1.895534962 1 1 1 0.01 dme-miR-317-5p 6mer3-8 GTATCC 3L 21183079 21183084 + 3L_21183079_21183084_+ 1 1 1 0 chb FBtr0089460|FBtr0089462|FBtr0089461 21182607|21182607|21182607 21183278|21183278|21183278 3L + 21182951 21183153 3'utr chb FlyBase G31984.1 ACATCAGTTGTACGTCTTTTTACCAGCTCCTAACTATTAACGCTGATTCTGTTTAATTTGTAAGCCTATATACCGCTCTTTATGGAAACTCAGACGTGTGCTTTTCTACCTTTGTTTCAGGCGACTTTGTATCCTTATTTCGTTTCCGCTCAACTAAATTCTAATTACTATTATTAATACGATTCTGCTCTTACAACTGAACT 65 21183053 0.985599806 27 64 599 0.985714286 1.838849091 0.042857143 0.076923077 0.142857143 65 1 0 69 3L:21182951-21183153 6 chb FBtr0089461|FBtr0089460|FBtr0089462 21182607|21182607|21182607 21183278|21183278|21183278 GTATCC 6mer3-8 dme-miR-317-5p 3L + 21183032 21183106 3'utr chb FlyBase G24174.1 ATGGAAACTCAGACGTGTGCTTTTCTACCTTTGTTTCAGGCGACTTTGTATCCTTATTTCGTTTCCGCTCAACTA 24 21183053 0.765103297 8 21 188 0.878787879 0.985276743 0 0.25 0.454545455 24 2 2 29 3L:21183032-21183106 6 9.5 2853 FBgn0021760 2411.923333 49.25 75.71333333 0.003938765 0.192893401 0.125473276 26 26 26 0.01 dme-miR-263a-5p 7mer-A1 TGCCATA 3L 21207642 21207648 + 3L_21207642_21207648_+ 0.782911824 0.742372786 0.762642305 0.028665402 CG10512 FBtr0078299|FBtr0078297|FBtr0078298|FBtr0078300 21207593|21207593|21207593|21207593 21208092|21208092|21208092|21208092 3L + 21207630 21207682 3'utr CG10512 FlyBase G31998.1 AAGCATACCCATTGCCATATGTTGAAGACGCCTCTGCATTTTGATGGACCAAA 40 21207641 0.739765202 12 39 250 0.976744186 1.62324929 0.418604651 0.075 0.139534884 40 1 0 42 3L:21207630-21207682 7 CG10512 FBtr0078300|FBtr0078298|FBtr0078297|FBtr0078299 21207593|21207593|21207593|21207593 21208092|21208092|21208092|21208092 TGCCATA 7mer-A1 dme-miR-263a-5p 3L + 21207630 21207683 3'utr CG10512 FlyBase G24182.1 AAGCATACCCATTGCCATATGTTGAAGACGCCTCTGCATTTTGATGGACCAAAG 24 21207671 0.787194722 6 22 161 0.891891892 1.217483944 0.297297297 0.333333333 0.567567568 24 3 1 33 3L:21207630-21207683 7 21 2854 FBgn0037057 268.2233333 18.25666667 27.67 0.078292965 1.150264743 0.758944705 1 -29 -14 0.01 dme-miR-283-5p 8mer-m1 TGATATTT 3L 21207717 21207724 + 3L_21207717_21207724_+ 0.555593841 0.555593841 0.555593841 0 CG10512 FBtr0078299|FBtr0078297|FBtr0078298|FBtr0078300 21207593|21207593|21207593|21207593 21208092|21208092|21208092|21208092 3L + 21207690 21207828 3'utr CG10512 FlyBase G31999.1 AGTAACACTTTACACTGAGAGAAATATTGATATTTGCAACAGTTAGATTAGATTGCACTGGTGCTGAACTAAAGCTAGTTACATATCTCCATGTTGCACTTAAAACATATTTCTAGTCTCCTAAGAGTCTGTCGTTGCT 339 21207716 0.75351299 38 296 2568 0.883663366 1.950608225 0.222772277 0.16519174 0.29950495 339 44 3 357 3L:21207690-21207828 8 CG10512 FBtr0078300|FBtr0078298|FBtr0078297|FBtr0078299 21207593|21207593|21207593|21207593 21208092|21208092|21208092|21208092 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 21207690 21207830 3'utr CG10512 FlyBase G24183.1 AGTAACACTTTACACTGAGAGAAATATTGATATTTGCAACAGTTAGATTAGATTGCACTGGTGCTGAACTAAAGCTAGTTACATATCTCCATGTTGCACTTAAAACATATTTCTAGTCTCCTAAGAGTCTGTCGTTGCTCC 174 21207716 0.755643385 25 154 1326 0.882142857 2.392696953 0.210714286 0.454022989 0.660714286 174 33 0 247 3L:21207690-21207830 8 141.5 2855 FBgn0037057 268.2233333 18.25666667 27.67 0.527545453 7.750593391 5.113841706 1 1 1 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG 3L 21208038 21208043 + 3L_21208038_21208043_+ 0.999999998 1 0.999999999 0 CG10512 FBtr0078299|FBtr0078297|FBtr0078298|FBtr0078300 21207593|21207593|21207593|21207593 21208092|21208092|21208092|21208092 3L + 21207982 21208095 3'utr CG10512 FlyBase G32000.2 AAAACAAAAACTATCTGTTTTAAAATATATTGATTTTGGCACTTTGAGATACCCATGCTGTGTTCAGCAATTTCAAAACTATTAAAATAAACAATATACTCTTCGATAATCAAA 189 21208037 0.839962392 15 187 1232 0.991452991 2.064457989 0.017094017 0.201058201 0.354700855 189 1 1 232 3L:21207982-21208095 6 CG10512 FBtr0078300|FBtr0078298|FBtr0078297|FBtr0078299 21207593|21207593|21207593|21207593 21208092|21208092|21208092|21208092 GCTGTG 6mer2-7 dme-miR-1008-3p 3L + 21208015 21208088 3'utr CG10512 FlyBase G24185.1 TTTTGGCACTTTGAGATACCCATGCTGTGTTCAGCAATTTCAAAACTATTAAAATAAACAATATACTCTTCGAT 165 21208037 0.853424493 10 157 1084 0.931034483 2.385606274 0.007662835 0.406060606 0.624521073 165 18 0 243 3L:21208015-21208088 6 167 2856 FBgn0037057 268.2233333 18.25666667 27.67 0.622615482 9.147343436 6.03541742 1 1 1 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3L 21219029 21219034 + 3L_21219029_21219034_+ 1 1 1 0 Ilk FBtr0078305 21218943 21219240 3L + 21218965 21219172 3'utr Ilk FlyBase G32011.1 AAATGCCAAGCCAAAATGTGCCTTGAGAAACCTTAGATTTGCCAACTAATTGTAATTACTACTTTGTGTTACCTTTGTCTAACTGAGCCTAACCGAAAACCGTACCGAAATGGCAAAGCAAGTGCAACTGCTCTGTCTAGAGTTTATGTTTCTGTGTCTCACTGTTCTCTACTTATGATTTTCCGTCGATGTTTAGTGCGGGTGCTCG 123 21219040 0.948285788 29 115 1086 0.966887417 2.164352856 0.152317881 0.203252033 0.350993377 123 5 0 146 3L:21218965-21219172 6 Ilk FBtr0078305 21218943 21219240 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 21218972 21219085 3'utr Ilk FlyBase G24193.1 AAGCCAAAATGTGCCTTGAGAAACCTTAGATTTGCCAACTAATTGTAATTACTACTTTGTGTTACCTTTGTCTAACTGAGCCTAACCGAAAACCGTACCGAAATGGCAAAGCAA 52 21219040 0.988980554 13 48 452 0.956521739 1.944482672 0.086956522 0.461538462 0.695652174 52 4 0 88 3L:21218972-21219085 6 47.5 2857 FBgn0028427 517.3333333 43.88 67.08 0.09181701 1.082497721 0.70810972 -11 -11 -11 0.01 dme-miR-184-3p 6mer2-7 CCGTCC 3L 2126105 2126110 - 3L_2126105_2126110_- 1 1 1 0 zormin FBtr0332117 2117464 2126635 3L - 2126073 2126129 5'utr zormin FlyBase G33634.1 AACAGCCACAGGCCACATCCCGTCCGACCATGTACTACAATGCTGTTGCTGGAGCTC 141 2126112 0.96916555 3 139 307 0.987878788 2.212187604 0.012121212 0.141843972 0.266666667 141 2 0 163 3L:2126073-2126129 6 zormin FBtr0332117 2117464 2126635 CCGTCC 6mer2-7 dme-miR-184-3p 3L - 2126071 2126133 5'utr zormin FlyBase G25434.1 CAGAAACAGCCACAGGCCACATCCCGTCCGACCATGTACTACAATGCTGTTGCTGGAGCTCCG 48 2126112 0.967881844 3 48 80 1 1.886490725 0.051948052 0.479166667 0.675324675 48 0 0 77 3L:2126071-2126133 6 92.5 2858 FBgn0052311 753.3466667 9.526666667 14.67333333 0.122785437 9.709587124 6.303952749 2 2 2 0.01 dme-miR-283-5p 6mer3-8 TGATAT 3L 21271250 21271255 - 3L_21271250_21271255_- 1 1 1 0 AcCoAS FBtr0333126|FBtr0078413|FBtr0078414 21271207|21270720|21271207 21271704|21271704|21271704 3L - 21271216 21271273 3'utr AcCoAS FlyBase G38884.1 ATGTATTTTTAGTAGAATTGATATGAGACAAAATATATACACGATTCCAATTGTCGCC 58 21271250 0.897842755 7 58 344 1 1.838849091 0.086956522 0.172413793 0.304347826 58 0 0 69 3L:21271216-21271273 6 AcCoAS FBtr0078413|FBtr0078414|FBtr0333126 21270720|21271207|21271207 21271704|21271704|21271704 TGATAT 6mer3-8 dme-miR-283-5p 3L - 21271208 21271266 3'utr AcCoAS FlyBase G29357.1 TTTAGTAGAATTGATATGAGACAAAATATATACACGATTCCAATTGTCGCCACAATTTA 40 21271250 0.968921785 6 39 218 0.982142857 1.740362689 0.089285714 0.275 0.482142857 40 1 0 55 3L:21271208-21271266 6 45.5 2859 FBgn0012034 1039.716667 45.38666667 69.30333333 0.043761922 1.002497062 0.656534077 -5 -5 -5 0.01 dme-miR-307a-3p 7mer-A1 GTTGTGA 3L 21271302 21271308 - 3L_21271302_21271308_- 0.823348641 0.823348565 0.823348603 0 AcCoAS FBtr0333126|FBtr0078413|FBtr0078414 21271207|21270720|21271207 21271704|21271704|21271704 3L - 21271274 21271342 3'utr AcCoAS FlyBase G38885.1 TCGTTGTAGTCGTAGTTTAAGTTCTCGCTAATTCGTTGTGATACAAATTTAATTATATCTTACTTATGT 255 21271309 0.736483011 18 230 2338 0.903846154 1.274157849 0.480769231 0.173228346 0.326923077 254 16 14 282 3L:21271274-21271342 7 AcCoAS FBtr0078413|FBtr0078414|FBtr0333126 21270720|21271207|21271207 21271704|21271704|21271704 GTTGTGA 7mer-A1 dme-miR-307a-3p 3L - 21271270 21271341 3'utr AcCoAS FlyBase G29358.1 CGTTGTAGTCGTAGTTTAAGTTCTCGCTAATTCGTTGTGATACAAATTTAATTATATCTTACTTATGTATGT 154 21271308 0.691948948 16 136 1388 0.887029289 1.627365857 0.464435146 0.376623377 0.59832636 154 23 4 212 3L:21271270-21271341 7 191.5 2860 FBgn0012034 1039.716667 45.38666667 69.30333333 0.184184794 4.219300823 2.763214853 1 0 0.5 0.01 dme-miR-34-5p 6mer3-8 CACTGC 3L 21271545 21271550 - 3L_21271545_21271550_- 1 1 1 0 AcCoAS FBtr0333126|FBtr0078413|FBtr0078414 21271207|21270720|21271207 21271704|21271704|21271704 3L - 21271374 21271596 3'utr AcCoAS FlyBase G38886.1 CGCGATTACGTATCCTGTAAATCTCCCTCTACTTATATGAATTACCCACTGCTTAATGTTTGTTCCGTTCCGGGCTACGGCGTGGTTAGCACCTTTCAAATTCTACTTAGCTCGTAAGCCTAAGCGTGTGCGTAAGTAAGTGACTGGATGGTTTCCGATCCCAGTTATATATCGTCTATATGATTTTGTGTACTTGCCTGTTCATCGTAGTTGACATGCTCAC 137 21271534 0.888264332 34 126 1158 0.913793103 1.72427587 0.172413793 0.218978102 0.385057471 137 13 2 159 3L:21271374-21271596 6 AcCoAS FBtr0078413|FBtr0078414|FBtr0333126 21270720|21271207|21271207 21271704|21271704|21271704 CACTGC 6mer3-8 dme-miR-34-5p 3L - 21271424 21271596 3'utr AcCoAS FlyBase G29359.2 CGCGATTACGTATCCTGTAAATCTCCCTCTACTTATATGAATTACCCACTGCTTAATGTTTGTTCCGTTCCGGGCTACGGCGTGGTTAGCACCTTTCAAATTCTACTTAGCTCGTAAGCCTAAGCGTGTGCGTAAGTAAGTGACTGGATGGTTTCCGATCCCAGTTATATATC 84 21271534 0.863846009 23 78 637 0.958677686 1.763427994 0.115702479 0.357142857 0.553719008 84 4 1 116 3L:21271424-21271596 6 16 2861 FBgn0012034 1039.716667 45.38666667 69.30333333 0.015388808 0.352526439 0.230869126 -16 -16 -16 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 3L 21280652 21280657 - 3L_21280652_21280657_- 1 1 1 0 ppl FBtr0078412 21280489 21280688 3L - 21280624 21280742 stop_codon ppl FlyBase G38901.1 CTTATGACCGAGGATCAGTACAAAGCCTTCCTGAGCAGCAGTGGGGATCACTAGAACCAGCAGCTAATCCTAACCCTAAAGCATCTTGACTGTAGCCTTTAAAACGAGTAATTGTTAGC 33 21280650 0.971040779 9 31 183 0.918918919 1.054357662 0.054054054 0.090909091 0.189189189 33 1 2 34 3L:21280624-21280742 6 ppl FBtr0078412 21280489 21280688 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 21280638 21280670 3'utr ppl FlyBase G29373.1 ACCCTAAAGCATCTTGACTGTAGCCTTTAAAAC 15 21280656 0.634234328 3 15 92 1 1.380211242 0 0.466666667 0.666666667 15 0 0 24 3L:21280638-21280670 6 17 2862 FBgn0027945 285 39.5 59.95666667 0.059649123 0.430379747 0.283538111 -7 -1 -4 0.01 dme-bantam-3p 6mer2-7 GATCTC 3L 21289629 21289634 + 3L_21289629_21289634_+ 1 1 1 0 pzg FBtr0078336|FBtr0331793 21289486|21289486 21290310|21290041 3L + 21289609 21289788 3'utr pzg FlyBase G32033.1 TTAGCTGTGGGCACGCTCAAGATCTCTGGAGGACTTTTGCACACCCCAATTTGAAACCCACTCCCTGACACCCACAACCGAACCAACTTTACAGACAACTGAACACGAAGACAGAAAAATACACACACGAACCTTTTCAATATATATTTACATTTAGTATATGTATTAAACACTCCAGTA 241 21289635 0.94936257 20 235 1005 0.986440678 2.463892989 0.318644068 0.191666667 0.342372881 240 4 0 291 3L:21289609-21289788 6 pzg FBtr0078336|FBtr0331793 21289486|21289486 21290310|21290041 GATCTC 6mer2-7 dme-bantam-3p 3L + 21289608 21289694 3'utr pzg FlyBase G24211.1 TTTAGCTGTGGGCACGCTCAAGATCTCTGGAGGACTTTTGCACACCCCAATTTGAAACCCACTCCCTGACACCCACAACCGAACCAA 174 21289635 0.970078749 8 171 741 0.98540146 2.130333768 0.354014599 0.396551724 0.616788321 174 3 1 270 3L:21289608-21289694 6 176 2863 FBgn0259785 1717.95 53.61666667 82.12666667 0.102447685 3.282561393 2.14303109 -6 -6 -6 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 21302523 21302528 - 3L_21302523_21302528_- 0.729231321 0.730949445 0.730090383 0.00121488 CG11309 FBtr0078407|FBtr0078407|FBtr0078407|FBtr0331798|FBtr0331798|FBtr0331798|FBtr0321283|FBtr0321283|FBtr0321283|FBtr0321282|FBtr0321282|FBtr0321282|FBtr0345883|FBtr0345883|FBtr0345883|FBtr0078406|FBtr0078406|FBtr0078406 21302274|21302274|21302274|21302478|21302478|21302478|21302274|21302274|21302274|21302478|21302478|21302478|21301783|21301783|21301783|21302478|21302478|21302478 21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604 3L - 21302497 21302563 3'utr CG11309 FlyBase G38905.1 ATTGTACAGGTTTTTATACTTAATTGTTTATGCTATGTGATCGCGGCAGAGGACTCGGCTCTGCTAT 16 21302550 0.81657032 10 14 139 0.842105263 1.204119983 0.210526316 0.1875 0.315789474 16 3 0 16 3L:21302497-21302563 6 CG11309 FBtr0321282|FBtr0321282|FBtr0321282|FBtr0321283|FBtr0321283|FBtr0321283|FBtr0331798|FBtr0331798|FBtr0331798|FBtr0078407|FBtr0078407|FBtr0078407|FBtr0078406|FBtr0078406|FBtr0078406|FBtr0345883|FBtr0345883|FBtr0345883 21302478|21302478|21302478|21302274|21302274|21302274|21302478|21302478|21302478|21302274|21302274|21302274|21302478|21302478|21302478|21301783|21301783|21301783 21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 21302512 21302550 3'utr CG11309 FlyBase G29377.1 TTATACTTAATTGTTTATGCTATGTGATCGCGGCAGAGG 8 21302534 0.980490356 5 7 58 0.9 1.255272505 0.8 0.625 0.85 8 2 0 18 3L:21302512-21302550 6 8.5 2864 FBgn0037070 162.24 12.80666667 19.53 0.052391519 0.663716814 0.435227855 22 6 14 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 21306029 21306034 + 3L_21306029_21306034_+ 1 1 1 0 CG7632 FBtr0321281|FBtr0078339 21305971|21305971 21306197|21306197 3L + 21305972 21306087 3'utr CG7632 FlyBase G32041.1 AGACCGCCTTAACATAGACCTCGACATATAGACCCGTGTACAAACTAGCGGATTCGTGTACCTTACTCCTAATGTTTAATTTAACCCAACGCAGATTGATGATATTTACTGGATAT 78 21306028 0.934855111 8 77 531 0.988764045 1.944482672 0.02247191 0.128205128 0.235955056 78 1 0 88 3L:21305972-21306087 6 CG7632 FBtr0321281|FBtr0078339 21305971|21305971 21306197|21306197 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 21305971 21306093 stop_codon CG7632 FlyBase G24218.1 GAGACCGCCTTAACATAGACCTCGACATATAGACCCGTGTACAAACTAGCGGATTCGTGTACCTTACTCCTAATGTTTAATTTAACCCAACGCAGATTGATGATATTTACTGGATATTATATG 55 21306028 0.98199323 9 54 402 1 1.908485019 0.086419753 0.363636364 0.567901235 55 0 0 81 3L:21305971-21306093 6 43 2865 FBgn0037071 107.9566667 9.143333333 13.89 0.398307963 4.702880058 3.09575234 1 1 1 0.01 dme-miR-305-5p 7mer-m1 GTACAAT 3L 21306162 21306168 + 3L_21306162_21306168_+ 0.765586663 0.765586663 0.765586663 0 CG7632 FBtr0321281|FBtr0078339 21305971|21305971 21306197|21306197 3L + 21306129 21306192 3'utr CG7632 FlyBase G32042.1 TGGAAAATTGGTTGCTTCTATTTAATTTATTATGTACAATCAATACCGGCAATAACATTAATGT 8 21306171 0.922158544 4 8 58 1 0.954242509 0 0.125 0.222222222 8 0 0 9 3L:21306129-21306192 7 CG7632 FBtr0321281|FBtr0078339 21305971|21305971 21306197|21306197 GTACAAT 7mer-m1 dme-miR-305-5p 3L + 21306125 21306194 3'utr CG7632 FlyBase G24219.1 ACATTGGAAAATTGGTTGCTTCTATTTAATTTATTATGTACAATCAATACCGGCAATAACATTAATGTTA 14 21306137 0.89570349 6 13 110 0.933333333 0.84509804 0 0.071428571 0.133333333 14 0 1 14 3L:21306125-21306194 7 4.5 2866 FBgn0037071 107.9566667 9.143333333 13.89 0.041683391 0.492161867 0.323974082 -9 25 8 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3L 21315592 21315597 - 3L_21315592_21315597_- 0.999999999 1 0.999999999 0 Pc FBtr0078405 21306136 21316423 3L - 21315515 21315633 5'utr Pc FlyBase G38911.1 AATATTTATTTTAACATGTTCTCTTAGCAGTCATTCAAGACTCAAGTGCTGCCTTTATGGGTTCAGAGCGGTGCAGTGCACAGATAATTCCAAATCGAGCCCATAGACTCATTACTTAA 31 21315610 0.987417936 8 29 264 0.942857143 1.51851394 0.057142857 0.096774194 0.2 31 2 0 33 3L:21315515-21315633 6 Pc FBtr0078405 21306136 21316423 AAGACT 6mer3-8 dme-miR-14-3p 3L - 21315569 21315637 5'utr Pc FlyBase G29381.1 ACGTAATATTTATTTTAACATGTTCTCTTAGCAGTCATTCAAGACTCAAGTGCTGCCTTTATGGGTTCA 22 21315610 0.99074112 7 21 218 0.935483871 1.462397998 0.032258065 0.318181818 0.516129032 22 2 0 29 3L:21315569-21315637 6 7 2867 FBgn0003042 426.7466667 21.12 32.45666667 0.016403174 0.331439394 0.215672178 13 13 13 0.01 dme-miR-965-3p 8mer-A1 TACGCTTA 3L 21315830 21315837 - 3L_21315830_21315837_- 0.625364919 0.625364919 0.625364919 0 Pc FBtr0078405 21306136 21316423 3L - 21315800 21315873 5'utr Pc FlyBase G38913.1 AAGAAAACTCCATGCGAAACCGAAGCAATTGTTGATTACGCTTACAAATATATACAATAGAAGATGCATATATT 37 21315838 0.984513143 5 36 284 0.977777778 1.643452676 0.244444444 0.189189189 0.333333333 37 1 0 44 3L:21315800-21315873 8 Pc FBtr0078405 21306136 21316423 TACGCTTA 8mer-A1 dme-miR-965-3p 3L - 21315810 21315860 5'utr Pc FlyBase G29383.1 GCGAAACCGAAGCAATTGTTGATTACGCTTACAAATATATACAATAGAAGA 20 21315838 0.984584544 2 20 166 1 1.505149978 0.3125 0.3 0.5625 20 0 0 32 3L:21315810-21315860 8 27 2868 FBgn0003042 426.7466667 21.12 32.45666667 0.063269387 1.278409091 0.831878402 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 21316355 21316360 - 3L_21316355_21316360_- 1 1 1 0 Pc FBtr0078405 21306136 21316423 3L - 21316314 21316389 5'utr Pc FlyBase G38915.1 GGAAAACTGATACAATTGTAAATAGACAAACCAAAATGCGAGAAAGTTGAGAGAAGAATTATGCAGAGAAATCCAC 16 21316353 0.948324108 6 14 37 0.944444444 1.230448921 0.277777778 0.125 0.222222222 16 1 0 17 3L:21316314-21316389 6 Pc FBtr0078405 21306136 21316423 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 21316297 21316366 5'utr Pc FlyBase G29386.1 AGACAAACCAAAATGCGAGAAAGTTGAGAGAAGAATTATGCAGAGAAATCCACACTAAATGTTGCTAAGC 10 21316353 0.910485537 6 7 22 0.764705882 0.812913357 0.294117647 0.6 0.764705882 10 3 1 13 3L:21316297-21316366 6 7.5 2869 FBgn0003042 426.7466667 21.12 32.45666667 0.01757483 0.355113636 0.231077334 -7 -7 -7 0.01 dme-miR-995-5p 7mer-m1 ATTCGGG 3L 21338064 21338070 + 3L_21338064_21338070_+ 0.825582373 0.825582373 0.825582373 0 CG7338 FBtr0078342 21337940 21338232 3L + 21338031 21338089 3'utr CG7338 FlyBase G32052.1 AACCTCTAAAAGTATGAAACCTACGAAGTGTCCATTCGGGAAATGTCACCCGAAAAGTA 13 21338075 0.959041307 4 12 58 0.9375 1.176091259 0.0625 0.230769231 0.375 13 1 0 15 3L:21338031-21338089 7 CG7338 FBtr0078342 21337940 21338232 ATTCGGG 7mer-m1 dme-miR-995-5p 3L + 21338048 21338088 3'utr CG7338 FlyBase G24228.1 AACCTACGAAGTGTCCATTCGGGAAATGTCACCCGAAAAGT 10 21338076 0.863105 3 10 32 1 1.230448921 0.235294118 0.4 0.647058824 10 0 0 17 3L:21338048-21338088 7 11.5 2870 FBgn0037073 698.1166667 29.76666667 45.67333333 0.016472891 0.386338186 0.25178806 -11 -12 -11.5 0.01 dme-miR-184-5p 6mer2-7 GATAAG 3L 21420451 21420456 - 3L_21420451_21420456_- 1 1 1 0 barc FBtr0078400|FBtr0078399 21420386|21420386 21420700|21420700 3L - 21420443 21420490 3'utr barc FlyBase G38945.1 TGGCACAGTTATTATCAAGCGGTTGGCTGTTGGAGATAAGTTGCACAT 38 21420467 0.809689219 5 37 254 0.977272727 1.633468456 0 0.157894737 0.272727273 38 1 0 43 3L:21420443-21420490 6 barc FBtr0078400|FBtr0078399 21420386|21420386 21420700|21420700 GATAAG 6mer2-7 dme-miR-184-5p 3L - 21420421 21420482 3'utr barc FlyBase G29416.1 TTATTATCAAGCGGTTGGCTGTTGGAGATAAGTTGCACATAGCTAGAATTGTTGCTTAAGCG 33 21420467 0.981249256 6 32 229 0.946428571 1.72427587 0.142857143 0.515151515 0.714285714 33 3 0 53 3L:21420421-21420482 6 32.5 2871 FBgn0037081 1274.85 68.70666667 106.1366667 0.025493195 0.473025422 0.306208976 11 11 11 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 3L 21423499 21423505 + 3L_21423499_21423505_+ 0.620204266 0.620204266 0.620204266 0 rgn FBtr0333386|FBtr0078346|FBtr0309230|FBtr0333385 21423268|21423268|21423268|21423268 21424061|21424416|21424061|21424061 3L + 21423465 21423544 3'utr rgn FlyBase G32060.1 ATCGCTGCGAAGCAGATTTTGTCGGTTAATTAATTGCATTTCGATCGAGCAGGAAACCCAATCTCCATGCGCTTCGCTAG 9 21423498 0.979194534 3 9 63 1 1 0.6 0.111111111 0.2 9 0 0 10 3L:21423465-21423544 7 rgn FBtr0309230|FBtr0333385|FBtr0333386|FBtr0078346 21423268|21423268|21423268|21423268 21424061|21424061|21424061|21424416 TGCATTT 7mer-m8 dme-miR-277-3p 3L + 21423487 21423549 3'utr rgn FlyBase G24234.1 CGGTTAATTAATTGCATTTCGATCGAGCAGGAAACCCAATCTCCATGCGCTTCGCTAGCTATT 9 21423498 0.883239931 2 9 68 1 1.146128036 0.285714286 0.555555556 0.714285714 9 0 0 14 3L:21423487-21423549 7 5.5 2872 FBgn0261258 1418.933333 41.47666667 64.17666667 0.003876151 0.132604677 0.08570093 1 1 1 0.01 dme-miR-190-5p 6mer2-7 CATATC 3L 21436324 21436329 + 3L_21436324_21436329_+ 1 1 1 0 Aef1 FBtr0078348|FBtr0078350|FBtr0078349 21436208|21436208|21436208 21438639|21437491|21437491 3L + 21436315 21436341 3'utr Aef1 FlyBase G32065.1 CAGCAGCAGCATATCGATCAGCGTGGA 6 21436332 0.881383018 2 4 15 0.666666667 0.77815125 0 0.5 0.666666667 6 3 0 6 3L:21436315-21436341 6 Aef1 FBtr0078348|FBtr0078350|FBtr0078349 21436208|21436208|21436208 21438639|21437491|21437491 CATATC 6mer2-7 dme-miR-190-5p 3L + 21436319 21436363 3'utr Aef1 FlyBase G24238.1 AGCAGCATATCGATCAGCGTGGAGTCACCATAACCACGTTGCCCT 6 21436332 0.734733457 2 4 20 0.7 0.84509804 0.1 0.5 0.7 6 3 0 7 3L:21436319-21436363 6 4.5 2873 FBgn0005694 574.74 23.47666667 36.08 0.007829627 0.191679682 0.124722838 -8 -8 -8 0.01 dme-miR-980-3p 6mer2-7 GCAGCT 3L 21436560 21436565 + 3L_21436560_21436565_+ 1 1 1 0 Aef1 FBtr0078348|FBtr0078350|FBtr0078349 21436208|21436208|21436208 21438639|21437491|21437491 3L + 21436474 21436589 3'utr Aef1 FlyBase G32066.1 TTGGGCGCTGTGACGGCGGACGGGAGCTTTGTGACCATGGGCGGTGTTGTGGTGGGTCGCATCCAGCACACACGAGAGGAACTGCAGCAGCTTGGAGTGATCAAGGTGGAGTCACC 34 21436566 0.949245337 9 32 146 0.958333333 1.361727836 0.520833333 0.323529412 0.520833333 34 1 1 46 3L:21436474-21436589 6 Aef1 FBtr0078348|FBtr0078350|FBtr0078349 21436208|21436208|21436208 21438639|21437491|21437491 GCAGCT 6mer2-7 dme-miR-980-3p 3L + 21436532 21436591 3'utr Aef1 FlyBase G24240.1 GCATCCAGCACACACGAGAGGAACTGCAGCAGCTTGGAGTGATCAAGGTGGAGTCACCAT 19 21436566 0.936880669 2 19 75 1 1.414973348 0.346153846 0.315789474 0.5 19 0 0 26 3L:21436532-21436591 6 22 2874 FBgn0005694 574.74 23.47666667 36.08 0.038278178 0.937100667 0.609756098 -6 -6 -6 0.01 dme-miR-965-3p 8mer-A1 TACGCTTA 3L 21436804 21436811 + 3L_21436804_21436811_+ 0.625364919 0.625364919 0.625364919 0 Aef1 FBtr0330156|FBtr0078348|FBtr0078350|FBtr0078349 21436646|21436208|21436208|21436208 21437491|21438639|21437491|21437491 3L + 21436763 21436827 3'utr Aef1 FlyBase G32068.1 AGGAGCAGCGATCGAGCCAGAAGTGAGCCATGTTTGGTGTGTACGCTTACGTTGTTGTTAGTTGT 11 21436803 0.99120693 4 10 108 1 1.079181246 0.25 0.090909091 0.166666667 11 0 0 12 3L:21436763-21436827 8 Aef1 FBtr0330156|FBtr0078348|FBtr0078350|FBtr0078349 21436646|21436208|21436208|21436208 21437491|21438639|21437491|21437491 TACGCTTA 8mer-A1 dme-miR-965-3p 3L + 21436741 21436827 3'utr Aef1 FlyBase G24241.1 GTGGAAATTCAGGAGCAGAAAGAGGAGCAGCGATCGAGCCAGAAGTGAGCCATGTTTGGTGTGTACGCTTACGTTGTTGTTAGTTGT 10 21436786 0.99966469 6 9 63 0.909090909 0.698970004 0.454545455 0.1 0.181818182 10 0 1 10 3L:21436741-21436827 8 6.5 2875 FBgn0005694 574.74 23.47666667 36.08 0.011309462 0.276870652 0.180155211 1 18 9.5 0.01 dme-miR-1012-3p 7mer-A1 TGACTAA 3L 21436872 21436878 + 3L_21436872_21436878_+ 0.823349562 0.823349562 0.823349562 0 Aef1 FBtr0330156|FBtr0078348|FBtr0078350|FBtr0078349 21436646|21436208|21436208|21436208 21437491|21438639|21437491|21437491 3L + 21436850 21436890 3'utr Aef1 FlyBase G32069.1 TTGTTGTTAAGGTTTAAATGTGTGACTAAGAACTTACCAAG 6 21436868 0.970241029 3 5 44 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 3L:21436850-21436890 7 Aef1 FBtr0330156|FBtr0078348|FBtr0078350|FBtr0078349 21436646|21436208|21436208|21436208 21437491|21438639|21437491|21437491 TGACTAA 7mer-A1 dme-miR-1012-3p 3L + 21436831 21436903 3'utr Aef1 FlyBase G24242.1 ATTGTAGCGAACATTGTTGTTGTTGTTAAGGTTTAAATGTGTGACTAAGAACTTACCAAGATGATTGTATAGC 11 21436870 0.977204163 7 11 80 1 1.342422681 0.363636364 0.545454545 0.772727273 11 0 0 22 3L:21436831-21436903 7 6 2876 FBgn0005694 574.74 23.47666667 36.08 0.010439503 0.255572909 0.166297118 4 2 3 0.01 dme-miR-988-3p 6mer2-7 CAAGGG 3L 21437378 21437383 + 3L_21437378_21437383_+ 1 1 1 0 Aef1 FBtr0330156|FBtr0078348|FBtr0078350|FBtr0078349 21436646|21436208|21436208|21436208 21437491|21438639|21437491|21437491 3L + 21437338 21437410 3'utr Aef1 FlyBase G32070.1 GTTGTACAACTCAAAGTTGGTGACGTTTTTCGCCATCTTGCAAGGGCGTGTTTTAGTCTGGGCTAACACAAAT 15 21437376 0.982115308 7 14 106 1 1.230448921 0.352941176 0.133333333 0.235294118 15 0 0 17 3L:21437338-21437410 6 Aef1 FBtr0330156|FBtr0078348|FBtr0078350|FBtr0078349 21436646|21436208|21436208|21436208 21437491|21438639|21437491|21437491 CAAGGG 6mer2-7 dme-miR-988-3p 3L + 21437342 21437422 3'utr Aef1 FlyBase G24243.1 TACAACTCAAAGTTGGTGACGTTTTTCGCCATCTTGCAAGGGCGTGTTTTAGTCTGGGCTAACACAAATACAATTTGTTTA 17 21437376 0.959326012 7 17 112 1 1.491361694 0.483870968 0.411764706 0.677419355 17 0 0 31 3L:21437342-21437422 6 11.5 2877 FBgn0005694 574.74 23.47666667 36.08 0.020009048 0.489848076 0.318736142 2 2 2 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 3L 21437764 21437770 + 3L_21437764_21437770_+ 0.782911824 0.782911824 0.782911824 0 Aef1 FBtr0078348 21436208 21438639 3L + 21437747 21437806 3'utr Aef1 FlyBase G32073.1 GTAAAGCAACAAGTTCTGTACAAAGCCCAACTCCAATTTGTATGTATAAAGCGAAAGCGA 8 21437761 0.940178436 5 8 35 1 0.903089987 0 0 0 8 0 0 8 3L:21437747-21437806 7 Aef1 FBtr0078348 21436208 21438639 GTACAAA 7mer-A1 dme-miR-305-5p 3L + 21437751 21437786 3'utr Aef1 FlyBase G24245.1 AGCAACAAGTTCTGTACAAAGCCCAACTCCAATTTG 6 21437762 0.758988063 4 5 23 0.857142857 0.77815125 0.142857143 0.166666667 0.285714286 6 1 0 6 3L:21437751-21437786 7 6 2878 FBgn0005694 574.74 23.47666667 36.08 0.010439503 0.255572909 0.166297118 3 2 2.5 0.01 dme-miR-1007-3p 6mer3-8 TGAGCT 3L 21438978 21438983 - 3L_21438978_21438983_- 1 1 1 0 CG5664 FBtr0331822 21438626 21439731 3L - 21438965 21439002 3'utr CG5664 FlyBase G38953.2 ACCTATCTGAACAACTTTCTGAGCTATGAAGAGTCCAT 8 21438983 0.771730533 2 7 50 0.888888889 0.602059991 0.111111111 0.125 0.222222222 8 0 1 8 3L:21438965-21439002 6 CG5664 FBtr0331822 21438626 21439731 TGAGCT 6mer3-8 dme-miR-1007-3p 3L - 21438935 21439002 3'utr CG5664 FlyBase G29421.1 ACCTATCTGAACAACTTTCTGAGCTATGAAGAGTCCATGTCTCCAGTAGACTCTGCGTCTTCCTCCTT 7 21438983 0.979021754 3 7 56 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3L:21438935-21439002 6 6.5 2879 FBgn0037082 240.3466667 11.07666667 16.92666667 0.027044269 0.586819139 0.384009453 0 0 0 0.01 dme-miR-282-5p 6mer2-7 GAGGCT 3L 21439311 21439316 - 3L_21439311_21439316_- 1 1 1 0 CG5664 FBtr0331822 21438626 21439731 3L - 21439292 21439388 3'utr CG5664 FlyBase G38954.1 AGTTGTCGCGTGAGGATTACCTAGCATTACTCCTTAGCGCCTTAAAAGACTATGACAAGTGGTTAAATCTTGGAGGCTTTTGGAAGTACCTAATGAG 16 21439318 0.987719868 7 15 129 0.952380952 1.301029996 0.285714286 0.3125 0.476190476 16 1 0 20 3L:21439292-21439388 6 CG5664 FBtr0331822 21438626 21439731 GAGGCT 6mer2-7 dme-miR-282-5p 3L - 21439300 21439332 3'utr CG5664 FlyBase G29422.1 AAGTGGTTAAATCTTGGAGGCTTTTGGAAGTAC 7 21439318 0.770065742 3 7 61 1 1.079181246 0.083333333 0.428571429 0.666666667 7 0 0 12 3L:21439300-21439332 6 9 2880 FBgn0037082 240.3466667 11.07666667 16.92666667 0.037445911 0.812518808 0.531705396 2 2 2 0.01 dme-miR-307a-3p 7mer-A1 GTTGTGA 3L 21447696 21447702 + 3L_21447696_21447702_+ 0.823349562 0.823349562 0.823349562 0 Syx7 FBtr0078351|FBtr0078352 21447650|21447650 21448128|21448128 3L + 21447645 21447719 stop_codon Syx7 FlyBase G32078.1 GAATTAGAGCCTTCCGGCATCTCCGAATGATTCAAACCAAACTAGTAAATTGTTGTGAAAAGACAAGAGTTGCCG 9 21447695 0.977275824 7 8 53 0.818181818 0.954242509 0.181818182 0.222222222 0.363636364 9 2 0 9 3L:21447645-21447719 7 Syx7 FBtr0078351|FBtr0078352 21447650|21447650 21448128|21448128 GTTGTGA 7mer-A1 dme-miR-307a-3p 3L + 21447669 21447720 3'utr Syx7 FlyBase G24253.1 GAATGATTCAAACCAAACTAGTAAATTGTTGTGAAAAGACAAGAGTTGCCGC 11 21447696 0.971281813 5 9 55 0.944444444 1.230448921 0.055555556 0.636363636 0.777777778 11 1 0 17 3L:21447669-21447720 7 8 2881 FBgn0086377 809 63.10333333 96.81333333 0.009888752 0.126776187 0.082633246 1 0 0.5 0.01 dme-miR-980-5p 7mer-A1 AAAAACA 3L 21447899 21447905 + 3L_21447899_21447905_+ 0.782911824 0.782911824 0.782911824 0 Syx7 FBtr0078351|FBtr0078352 21447650|21447650 21448128|21448128 3L + 21447734 21447998 3'utr Syx7 FlyBase G32079.1 AACCCCGTAATTCCCCACCCAATCCTTTGGACCTTAGGCGAGATTATGGCTTTAATCCTTAATCCAACTTCCAATACTGGCTGAAATCGAAAACTGCGACTCGTAGACGAAGATATAGTGTTTTGAGGAGTATTCACCGGCACGTGCATCTGTTATATTTGCTTTAAAAACAATTTTATATTTTATGTGTACTACTTTTATTATTACGCACCCTGTATATTGATTATTAGTATTGATTAACAACTGTTGGCTTCAAATTCTAATT 178 21447882 0.989020977 39 171 1650 0.97716895 2.330413773 0.150684932 0.191011236 0.342465753 178 5 0 214 3L:21447734-21447998 7 Syx7 FBtr0078351|FBtr0078352 21447650|21447650 21448128|21448128 AAAAACA 7mer-A1 dme-miR-980-5p 3L + 21447793 21447944 3'utr Syx7 FlyBase G24254.2 TAATCCAACTTCCAATACTGGCTGAAATCGAAAACTGCGACTCGTAGACGAAGATATAGTGTTTTGAGGAGTATTCACCGGCACGTGCATCTGTTATATTTGCTTTAAAAACAATTTTATATTTTATGTGTACTACTTTTATTATTACGCAC 103 21447882 0.868991852 22 95 944 0.918367347 2.130333768 0.204081633 0.339805825 0.537414966 103 12 0 135 3L:21447793-21447944 7 36.5 2882 FBgn0086377 809 63.10333333 96.81333333 0.045117429 0.578416354 0.377014185 17 17 17 0.01 dme-miR-305-5p 8mer-A1 AGTACAAA 3L 21497809 21497816 - 3L_21497809_21497816_- 0.605654138 0.605654138 0.605654138 0 Glg1 FBtr0078388|FBtr0332717 21497547|21497547 21498214|21498214 3L - 21497801 21497838 3'utr Glg1 FlyBase G38971.1 TACGGCAGAGCGCCTAGTTTTGAGTACAAAAGTTAAGT 40 21497819 0.944767221 5 40 264 1 1.643452676 0.25 0.1 0.181818182 40 0 0 44 3L:21497801-21497838 8 Glg1 FBtr0078388|FBtr0332717 21497547|21497547 21498214|21498214 AGTACAAA 8mer-A1 dme-miR-305-5p 3L - 21497805 21497837 3'utr Glg1 FlyBase G29436.1 ACGGCAGAGCGCCTAGTTTTGAGTACAAAAGTT 12 21497819 0.961536889 3 12 80 1 1.278753601 0.210526316 0.5 0.684210526 12 0 0 19 3L:21497805-21497837 8 26 2883 FBgn0264561 1367.6 37.22 56.66666667 0.019011407 0.698549167 0.458823529 3 3 3 0.01 dme-miR-1003-3p 6mer2-7 TGTGAG 3L 21498065 21498070 - 3L_21498065_21498070_- 1 0.999999493 0.999999746 3.54E-07 Glg1 FBtr0078388|FBtr0332717 21497547|21497547 21498214|21498214 3L - 21498016 21498100 3'utr Glg1 FlyBase G38973.1 CACTCAACCCTGTCTGCCTTTCGATATTTGTGTGAGCAATTTGTGGCTTAGTCGTTTGTAAGACCAAAAAATACGCGAGAAAGGA 22 21498059 0.985820918 11 21 163 0.965517241 1.447158031 0.448275862 0.227272727 0.413793103 22 1 0 28 3L:21498016-21498100 6 Glg1 FBtr0078388|FBtr0332717 21497547|21497547 21498214|21498214 TGTGAG 6mer2-7 dme-miR-1003-3p 3L - 21498011 21498100 3'utr Glg1 FlyBase G29438.1 CACTCAACCCTGTCTGCCTTTCGATATTTGTGTGAGCAATTTGTGGCTTAGTCGTTTGTAAGACCAAAAAATACGCGAGAAAGGAGAACA 15 21498059 0.984079317 8 14 101 0.952380952 1 0.285714286 0.4 0.571428571 15 0 1 20 3L:21498011-21498100 6 8 2884 FBgn0264561 1367.6 37.22 56.66666667 0.005849664 0.214938205 0.141176471 -11 -11 -11 0.01 dme-miR-14-3p 6mer2-7 AGACTG 3L 21498199 21498204 - 3L_21498199_21498204_- 1 1 1 0 Glg1 FBtr0078388|FBtr0332717 21497547|21497547 21498214|21498214 3L - 21498137 21498276 stop_codon Glg1 FlyBase G38974.1 TCCTCACCGGCATCTTCCTGGGACGGGCCACCAAACGGGCAATGGGCTTAAAGAATAAATAATTGAAATATTAGACTGTAGTGGCACTGTGTAGGCGGAGTGTGCATGTTTGTGAGCTTGCTGATTTCCATTTCGGCCCA 546 21498206 0.989258442 20 532 3875 0.968553459 1.886490725 0.11163522 0.137362637 0.259433962 546 13 7 616 3L:21498137-21498276 6 Glg1 FBtr0078388|FBtr0332717 21497547|21497547 21498214|21498214 AGACTG 6mer2-7 dme-miR-14-3p 3L - 21498151 21498257 stop_codon Glg1 FlyBase G29439.1 GGGACGGGCCACCAAACGGGCAATGGGCTTAAAGAATAAATAATTGAAATATTAGACTGTAGTGGCACTGTGTAGGCGGAGTGTGCATGTTTGTGAGCTTGCTGATT 269 21498206 0.980399184 12 249 1763 0.941860465 1.653212514 0.11627907 0.423791822 0.639534884 269 17 8 405 3L:21498151-21498257 6 356.5 2885 FBgn0264561 1367.6 37.22 56.66666667 0.260675636 9.578183772 6.291176471 2 2 2 0.01 dme-miR-305-3p 7mer-m8 ATGTGCC 3L 21511831 21511837 + 3L_21511831_21511837_+ 0.674515655 0.674515655 0.674515655 0 M6 FBtr0339793 21511707 21512749 3L + 21511781 21511865 3'utr M6 FlyBase G32087.1 TGGCCACTCTGTCCACCCTTTTGGTGCTGCTCAGTCTGGTCCACTACCTGATGTGCCTGTCTGCTAACTACGCCCACATTCGGGA 23 21511832 0.985853263 5 22 171 0.961538462 1.397940009 0.269230769 0.086956522 0.192307692 23 1 0 25 3L:21511781-21511865 7 M6 FBtr0339793 21511707 21512749 ATGTGCC 7mer-m8 dme-miR-305-3p 3L + 21511808 21511847 3'utr M6 FlyBase G24260.1 TGCTCAGTCTGGTCCACTACCTGATGTGCCTGTCTGCTAA 7 21511832 0.811613588 2 7 59 1 1.113943352 0 0.857142857 0.923076923 7 0 0 13 3L:21511808-21511847 7 12.5 2886 FBgn0037092 152.03 9.373333333 14.24333333 0.082220614 1.333570413 0.877603557 -1 -1 -1 0.01 dme-miR-184-3p 8mer-A1 TCCGTCCA 3L 21512254 21512261 + 3L_21512254_21512261_+ 0.619084963 0.572429476 0.595757219 0.03299042 M6 FBtr0332712|FBtr0332713|FBtr0078356|FBtr0332714|FBtr0332715|FBtr0339793 21511946|21511946|21511946|21511946|21511946|21511707 21512749|21512749|21512749|21512749|21512749|21512749 3L + 21512185 21512287 3'utr M6 FlyBase G32088.1 ACTGCCAAATCAAATGTTACACTGAAATTATGCTTCTTATCTACTGTACTGTTCCACTGACTTTTTTCTTCCGTCCATTGACTTAAGTTAGTTTACATTTATT 988 21512253 0.845403067 29 968 12105 0.98245614 2.572096768 0.129824561 0.126518219 0.242982456 988 18 2 1120 3L:21512185-21512287 8 M6 FBtr0332712|FBtr0332713|FBtr0332715|FBtr0339793|FBtr0078356|FBtr0332714 21511946|21511946|21511946|21511707|21511946|21511946 21512749|21512749|21512749|21512749|21512749|21512749 TCCGTCCA 8mer-A1 dme-miR-184-3p 3L + 21512186 21512287 3'utr M6 FlyBase G24263.1 CTGCCAAATCAAATGTTACACTGAAATTATGCTTCTTATCTACTGTACTGTTCCACTGACTTTTTTCTTCCGTCCATTGACTTAAGTTAGTTTACATTTATT 598 21512253 0.770483091 25 572 7045 0.958810069 2.321184027 0.129290618 0.352842809 0.557208238 598 33 3 838 3L:21512186-21512287 8 761 2887 FBgn0037092 152.03 9.373333333 14.24333333 5.005591002 81.18776671 53.42850456 1 1 1 0.01 dme-miR-252-5p 6mer3-8 GTACTT 3L 21513013 21513018 - 3L_21513013_21513018_- 1 1 1 0 SAK FBtr0078387 21512139 21513065 3L - 21512993 21513032 3'utr SAK FlyBase G38997.1 AAGTTTGAACAAATGTACTTGTATTGTAAATTAAGGGTAA 17 21513019 0.902393648 2 17 153 1 1.322219295 0.047619048 0.176470588 0.333333333 17 0 0 21 3L:21512993-21513032 6 SAK FBtr0078387 21512139 21513065 GTACTT 6mer3-8 dme-miR-252-5p 3L - 21512984 21513033 3'utr SAK FlyBase G29451.1 TAAGTTTGAACAAATGTACTTGTATTGTAAATTAAGGGTAAATATATTTT 8 21513019 0.9829522 2 8 64 1 1.079181246 0.25 0.5 0.666666667 8 0 0 12 3L:21512984-21513033 6 12 2888 FBgn0026371 393.3133333 14.06333333 21.48666667 0.030510026 0.853282768 0.558485883 1 1 1 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 21521846 21521851 + 3L_21521846_21521851_+ 0.999999988 0.999999998 0.999999993 0 Cdk12 FBtr0332716|FBtr0078358|FBtr0078357 21521780|21521780|21521780 21522156|21522684|21522156 3L + 21521809 21521888 3'utr Cdk12 FlyBase G32111.1 GTGAAGGAGAGCTACATACAGCGTGAAGGCGAGGAGTGTTCCTGGTGGCACTAGTAACTAGCCGTAACTAGCAATAACGT 23 21521845 0.968018259 4 22 112 0.964285714 1.431363764 0.392857143 0.173913043 0.321428571 23 1 0 27 3L:21521809-21521888 6 Cdk12 FBtr0078357|FBtr0078358|FBtr0332716 21521780|21521780|21521780 21522156|21522684|21522156 GTTCCT 6mer2-7 dme-miR-276a-3p 3L + 21521826 21521869 3'utr Cdk12 FlyBase G24279.1 ACAGCGTGAAGGCGAGGAGTGTTCCTGGTGGCACTAGTAACTAG 9 21521845 0.814845642 3 8 43 1 1.041392685 0.454545455 0.222222222 0.363636364 9 0 0 11 3L:21521826-21521869 6 14 2889 FBgn0037093 1128.82 30.18666667 46.38666667 0.012402332 0.463780919 0.301810865 1 1 1 0.01 dme-miR-1003-3p 7mer-m8 ATGTGAG 3L 21527687 21527693 + 3L_21527687_21527693_+ 0.671796207 0.671796207 0.671796207 0 CG7611 FBtr0301197|FBtr0078365|FBtr0078364|FBtr0301198|FBtr0078361|FBtr0078366|FBtr0078359|FBtr0078362|FBtr0078363 21527663|21527663|21527663|21527663|21527663|21527663|21527663|21527663|21527663 21528163|21528163|21528163|21528163|21528163|21528163|21528163|21528163|21528163 3L + 21527599 21527811 stop_codon CG7611 FlyBase G32127.1 AGCGCAACGACTGAGAGCGACGATTGCTCTTCTAGCTCGTCTTCGTCCTCCTGGAATATGACTTAAGGTCCCGAGCAGTAGCAAATGGATGTGAGTGGGATAGATTTTGGATGCTGATATAGTTATAGTGCGCCCTGATTTCGATATAAAGCTTAATGCGTACCGCTCTGATGGCGCATCGGGGTCGTCGTTGCTACAAACTGCCATTACAAC 246 21527684 0.915601417 39 235 1600 0.960854093 1.73239376 0.380782918 0.117886179 0.227758007 246 7 4 270 3L:21527599-21527811 7 CG7611 FBtr0078359|FBtr0078362|FBtr0078363|FBtr0078361|FBtr0078366|FBtr0078364|FBtr0301198|FBtr0301197|FBtr0078365 21527663|21527663|21527663|21527663|21527663|21527663|21527663|21527663|21527663 21528163|21528163|21528163|21528163|21528163|21528163|21528163|21528163|21528163 ATGTGAG 7mer-m8 dme-miR-1003-3p 3L + 21527631 21527851 stop_codon CG7611 FlyBase G24295.1 TAGCTCGTCTTCGTCCTCCTGGAATATGACTTAAGGTCCCGAGCAGTAGCAAATGGATGTGAGTGGGATAGATTTTGGATGCTGATATAGTTATAGTGCGCCCTGATTTCGATATAAAGCTTAATGCGTACCGCTCTGATGGCGCATCGGGGTCGTCGTTGCTACAAACTGCCATTACAACAATATGTATGAGCAGCATGACTTACGATTAGCATTAATTA 176 21527684 0.917388009 29 170 1023 0.958955224 2.409933123 0.481343284 0.380681818 0.593283582 176 11 0 257 3L:21527631-21527851 7 117 2890 FBgn0037094 718 25.08 38.30333333 0.162952646 4.66507177 3.054564442 3 3 3 0.01 dme-miR-1006-3p 6mer3-8 CGAATT 3L 21527963 21527968 + 3L_21527963_21527968_+ 1 1 1 0 CG7611 FBtr0301197|FBtr0078365|FBtr0078364|FBtr0301198|FBtr0078361|FBtr0078366|FBtr0078359|FBtr0078362|FBtr0078363 21527663|21527663|21527663|21527663|21527663|21527663|21527663|21527663|21527663 21528163|21528163|21528163|21528163|21528163|21528163|21528163|21528163|21528163 3L + 21527939 21528076 3'utr CG7611 FlyBase G32130.1 TATATATGTATGCATACGGCGATGCGAATTAATATTTCCGGCCTATATTAGCGACTCTTCTCGATCTTTTCATTTATTAAAAGTGCGATCGACCTGCTTGGTTTTCAAATTATTAAAGATTGCCATTTGATTTGTTCT 39 21527974 0.785181021 14 39 348 1 1.672097858 0.085106383 0.179487179 0.319148936 39 0 0 47 3L:21527939-21528076 6 CG7611 FBtr0078359|FBtr0078362|FBtr0078363|FBtr0078361|FBtr0078366|FBtr0078364|FBtr0301198|FBtr0301197|FBtr0078365 21527663|21527663|21527663|21527663|21527663|21527663|21527663|21527663|21527663 21528163|21528163|21528163|21528163|21528163|21528163|21528163|21528163|21528163 CGAATT 6mer3-8 dme-miR-1006-3p 3L + 21527908 21528011 3'utr CG7611 FlyBase G24296.1 AAGAAATCGATTCGTTCTCAGATTTCTTTTTTATATATGTATGCATACGGCGATGCGAATTAATATTTCCGGCCTATATTAGCGACTCTTCTCGATCTTTTCAT 28 21527974 0.98655004 9 28 240 1 1.544068044 0.028571429 0.214285714 0.371428571 28 0 0 35 3L:21527908-21528011 6 17.5 2891 FBgn0037094 718 25.08 38.30333333 0.024373259 0.697767145 0.456879297 -11 -11 -11 0.01 dme-miR-283-5p 8mer-m1 TGATATTT 3L 21530167 21530174 - 3L_21530167_21530174_- 0.555593841 0.555593841 0.555593841 0 Mkrn1 FBtr0078383 21529957 21531468 3L - 21530165 21530195 3'utr Mkrn1 FlyBase G39015.1 ATAGCTAAACCTATCCAGAAGTGATATTTTT 8 21530169 0.647468349 4 7 57 0.888888889 0.903089987 0 0.125 0.222222222 8 1 0 8 3L:21530165-21530195 8 Mkrn1 FBtr0078383 21529957 21531468 TGATATTT 8mer-m1 dme-miR-283-5p 3L - 21530160 21530195 3'utr Mkrn1 FlyBase G29460.1 ATAGCTAAACCTATCCAGAAGTGATATTTTTCTTTG 5 21530169 0.972516132 3 5 41 1 0.84509804 0 0.4 0.571428571 5 0 0 7 3L:21530160-21530195 8 6 2892 FBgn0029152 1179.853333 63.02 97.17333333 0.005085378 0.095207871 0.061745335 -5 -5 -5 0.01 dme-miR-2b-2-5p 6mer3-8 TTGAAG 3L 21530430 21530435 - 3L_21530430_21530435_- 1 1 1 0 Mkrn1 FBtr0078383 21529957 21531468 3L - 21530408 21530495 3'utr Mkrn1 FlyBase G39017.1 AAATATATCTTATGAGTAATTGGAAATAAGTACATAGTTTTAAAAACTCAAATATGGTCGTTGAAGTATGATATAGAATGAAAATTTC 56 21530441 0.978038579 8 54 407 0.955882353 1.511883361 0 0.214285714 0.352941176 56 2 1 65 3L:21530408-21530495 6 Mkrn1 FBtr0078383 21529957 21531468 TTGAAG 6mer3-8 dme-miR-2b-2-5p 3L - 21530417 21530465 3'utr Mkrn1 FlyBase G29461.1 TACATAGTTTTAAAAACTCAAATATGGTCGTTGAAGTATGATATAGAAT 33 21530441 0.796246004 4 33 226 1 1.653212514 0.022222222 0.363636364 0.533333333 33 0 0 45 3L:21530417-21530465 6 42 2893 FBgn0029152 1179.853333 63.02 97.17333333 0.035597645 0.666455094 0.432217344 6 6 6 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 21530710 21530715 - 3L_21530710_21530715_- 1 1 1 0 Mkrn1 FBtr0305331|FBtr0078384|FBtr0078383 21530604|21530604|21529957 21531468|21531468|21531468 3L - 21530692 21530779 3'utr Mkrn1 FlyBase G39020.1 ACTGCAAATATGATATGTATAACATCTTTACTGTATATGAATTTTAAGTTTATACTTTCGAAATGTACCTCTTTAAAATGTTTTATTT 99 21530716 0.836772961 11 99 897 1 2.11058971 0.015503876 0.212121212 0.395348837 99 0 0 129 3L:21530692-21530779 6 Mkrn1 FBtr0078383|FBtr0078384|FBtr0305331 21529957|21530604|21530604 21531468|21531468|21531468 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L - 21530690 21530764 3'utr Mkrn1 FlyBase G29464.1 TGTATAACATCTTTACTGTATATGAATTTTAAGTTTATACTTTCGAAATGTACCTCTTTAAAATGTTTTATTTTT 53 21530716 0.859013843 7 53 493 1 1.886490725 0 0.358490566 0.558441558 53 0 0 77 3L:21530690-21530764 6 68 2894 FBgn0029152 1179.853333 63.02 97.17333333 0.057634282 1.079022533 0.699780461 1 1 1 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 3L 21531075 21531081 - 3L_21531075_21531081_- 0.823349562 0.823349562 0.823349562 0 Mkrn1 FBtr0305331|FBtr0078384|FBtr0078383 21530604|21530604|21529957 21531468|21531468|21531468 3L - 21531056 21531116 3'utr Mkrn1 FlyBase G39021.1 ATTTTCAAAACTGGTGACTGTAAATTATGGCTTTCAGACTGAATTGTAAAGATAAAAATGC 102 21531084 0.707398048 9 99 751 0.976 1.785329835 0.04 0.18627451 0.336 102 2 1 122 3L:21531056-21531116 7 Mkrn1 FBtr0078383|FBtr0078384|FBtr0305331 21529957|21530604|21530604 21531468|21531468|21531468 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 21531059 21531110 3'utr Mkrn1 FlyBase G29466.1 AAAACTGGTGACTGTAAATTATGGCTTTCAGACTGAATTGTAAAGATAAAAA 87 21531084 0.636788534 11 84 633 0.947826087 1.736396502 0.07826087 0.252873563 0.434782609 87 5 1 109 3L:21531059-21531110 7 89 2895 FBgn0029152 1179.853333 63.02 97.17333333 0.075433105 1.412250079 0.915889133 3 3 3 0.01 dme-miR-2b-2-5p 6mer2-7 TGAAGA 3L 21540649 21540654 + 3L_21540649_21540654_+ 1 1 1 0 VhaM9.7-b FBtr0078369|FBtr0333454 21540394|21540394 21540698|21541215 3L + 21540633 21540664 3'utr VhaM9.7-b FlyBase G32143.1 ATCGAGTGTCTTAAAATGAAGATTGAAACCTA 5 21540643 0.634010009 4 4 33 0.8 0.602059991 0.2 0 0 5 1 0 4 3L:21540633-21540664 6 VhaM9.7-b FBtr0333454|FBtr0078369 21540394|21540394 21541215|21540698 TGAAGA 6mer2-7 dme-miR-2b-2-5p 3L + 21540636 21540670 3'utr VhaM9.7-b FlyBase G24306.1 GAGTGTCTTAAAATGAAGATTGAAACCTAAAATAA 5 21540649 0.821549564 2 4 31 0.8 0.602059991 0 0 0 5 1 0 4 3L:21540636-21540670 6 5 2896 FBgn0028663 439.5 80.42 122.6266667 0.011376564 0.062173589 0.040774165 6 0 3 0.01 dme-miR-33-5p 7mer-A1 AATGCAA 3L 21630777 21630783 - 3L_21630777_21630783_- 0.782911824 0.782911824 0.782911824 0 MED1 FBtr0302592 21630119 21630911 3L - 21630732 21630784 3'utr MED1 FlyBase G39065.1 TAATGCAAATGCTGTATTTACTTTAGCTATAAAACGATTTGTAATTTGCCTAC 8 21630763 0.991342102 5 7 67 0.875 0.84509804 0.125 0 0 8 1 0 7 3L:21630732-21630784 7 MED1 FBtr0302592 21630119 21630911 AATGCAA 7mer-A1 dme-miR-33-5p 3L - 21630751 21630799 3'utr MED1 FlyBase G29503.1 AACCTATCTTTAAACTAATGCAAATGCTGTATTTACTTTAGCTATAAAA 9 21630775 0.872472412 4 9 86 1 1.113943352 0 0.444444444 0.615384615 9 0 0 13 3L:21630751-21630799 7 6.5 2897 FBgn0037109 608.09 15.64333333 23.92 0.010689207 0.415512465 0.27173913 -20 -8 -14 0.01 dme-miR-11-3p 8mer-m1 CTGTGATG 3L 216363 216370 + 3L_216363_216370_+ 0.462274223 0.462274223 0.462274223 0 CG16940 FBtr0072486|FBtr0072487 216108|216108 216479|216479 3L + 216317 216385 3'utr CG16940 FlyBase G26717.1 TGAACCACATTGTGGGTCCGAGCTTTATGCTTGACAAAAATTGACTCTGTGATGCTTCCTTTTTCGGTT 25 216362 0.890948911 9 21 195 0.903225806 1.447158031 0.129032258 0.24 0.387096774 25 3 0 28 3L:216317-216385 8 CG16940 FBtr0072487|FBtr0072486 216108|216108 216479|216479 CTGTGATG 8mer-m1 dme-miR-11-3p 3L + 216320 216391 3'utr CG16940 FlyBase G20203.1 ACCACATTGTGGGTCCGAGCTTTATGCTTGACAAAAATTGACTCTGTGATGCTTCCTTTTTCGGTTTGCATA 28 216361 0.968264553 12 27 221 1 1.591064607 0.102564103 0.333333333 0.538461538 27 0 0 39 3L:216320-216391 8 21 2898 FBgn0035111 907.85 30.83666667 47.24666667 0.023131575 0.681007459 0.444475801 1 2 1.5 0.01 dme-miR-283-5p 7mer-m8 TGATATT 3L 21642236 21642242 + 3L_21642236_21642242_+ 0.620203677 0.620203677 0.620203677 0 Atox1 FBtr0330117|FBtr0078426 21642160|21642106 21642599|21642599 3L + 21642193 21642282 3'utr Atox1 FlyBase G32188.1 CACGTTGCCGCTCCGAAAGCATTCGATTTGGGTCGCTGTTCAGTGATATTCATGGGATACATACAAATTTTACTCTTAACCAAATCAAAT 61 21642232 0.680270866 17 56 502 0.918918919 1.531478917 0.175675676 0.180327869 0.324324324 61 5 1 68 3L:21642193-21642282 7 Atox1 FBtr0078426|FBtr0330117 21642106|21642160 21642599|21642599 TGATATT 7mer-m8 dme-miR-283-5p 3L + 21642198 21642274 3'utr Atox1 FlyBase G24336.1 TGCCGCTCCGAAAGCATTCGATTTGGGTCGCTGTTCAGTGATATTCATGGGATACATACAAATTTTACTCTTAACCA 55 21642232 0.988571323 10 50 457 0.903614458 1.273001272 0.120481928 0.363636364 0.578313253 55 5 3 75 3L:21642198-21642274 7 45.5 2899 FBgn0052446 139.3333333 19.38666667 29.60666667 0.326555024 2.346973865 1.536816032 4 4 4 0.01 dme-miR-999-3p 7mer-m8 AGTTAAC 3L 21642345 21642351 + 3L_21642345_21642351_+ 0.674514267 0.674514148 0.674514208 1.41E-07 Atox1 FBtr0330117|FBtr0078426 21642160|21642106 21642599|21642599 3L + 21642298 21642395 3'utr Atox1 FlyBase G32189.1 AAATTTTACCTTAGTATTTGCTCTTGCCCAAATTGTATGTAGCTCGTAGTTAACCAATTGAGGTGTTATTATATTATGCATTACTTATGCTTAGATGA 26 21642356 0.86602926 11 26 252 1 1.462397998 0.172413793 0.115384615 0.206896552 26 0 0 29 3L:21642298-21642395 7 Atox1 FBtr0078426|FBtr0330117 21642106|21642160 21642599|21642599 AGTTAAC 7mer-m8 dme-miR-999-3p 3L + 21642306 21642394 3'utr Atox1 FlyBase G24337.1 CCTTAGTATTTGCTCTTGCCCAAATTGTATGTAGCTCGTAGTTAACCAATTGAGGTGTTATTATATTATGCATTACTTATGCTTAGATG 10 21642356 0.987492038 5 10 87 1 1.113943352 0.230769231 0.2 0.384615385 10 0 0 13 3L:21642306-21642394 7 9.5 2900 FBgn0052446 139.3333333 19.38666667 29.60666667 0.068181818 0.49002751 0.320873677 -11 -11 -11 0.01 dme-miR-970-3p 8mer-A1 TCTTATGA 3L 21642527 21642534 + 3L_21642527_21642534_+ 0.630790218 0.630790218 0.630790218 0 Atox1 FBtr0330117|FBtr0078426 21642160|21642106 21642599|21642599 3L + 21642485 21642542 3'utr Atox1 FlyBase G32190.1 AATCCAACGTAGTTGCCAATAAATGATATACGCCAGTTGCCCTCTTATGACTAATCGT 12 21642522 0.990173395 4 9 88 0.6875 0.740362689 0.125 0.25 0.4375 12 4 1 11 3L:21642485-21642542 8 Atox1 FBtr0078426|FBtr0330117 21642106|21642160 21642599|21642599 TCTTATGA 8mer-A1 dme-miR-970-3p 3L + 21642496 21642552 3'utr Atox1 FlyBase G24338.1 GTTGCCAATAAATGATATACGCCAGTTGCCCTCTTATGACTAATCGTAATATTACAA 12 21642522 0.98295292 5 10 83 0.904761905 1.278753601 0.285714286 0.583333333 0.761904762 12 2 0 19 3L:21642496-21642552 8 11 2901 FBgn0052446 139.3333333 19.38666667 29.60666667 0.078947368 0.567400275 0.371537942 5 5 5 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 21683107 21683113 + 3L_21683107_21683113_+ 0.661615645 0.661615645 0.661615645 0 CG11248 FBtr0078430|FBtr0333967|FBtr0078431 21682915|21682915|21682915 21683231|21683231|21683231 3L + 21683060 21683127 3'utr CG11248 FlyBase G32194.1 AGATCCAACTTAGTTCAATTTATATAAATATTTATTTTGTTGTCTTTTGTGTTCGTTATCTTTATTTA 19 21683106 0.879119069 2 19 281 1 1.380211242 0 0.157894737 0.333333333 19 0 0 24 3L:21683060-21683127 7 CG11248 FBtr0078431|FBtr0333967|FBtr0078430 21682915|21682915|21682915 21683231|21683231|21683231 TGTGTTC 7mer-m8 dme-miR-317-3p 3L + 21683093 21683126 3'utr CG11248 FlyBase G24341.1 ATTTTGTTGTCTTTTGTGTTCGTTATCTTTATTT 11 21683106 0.729967988 2 11 156 1 1.204119983 0 0.272727273 0.5 11 0 0 16 3L:21683093-21683126 7 13.5 2902 FBgn0037117 323.0366667 13.05333333 20.00333333 0.041790922 1.03421859 0.674887519 1 1 1 0.01 dme-miR-31a-5p 8mer-A1 TCTTGCCA 3L 21724825 21724832 - 3L_21724825_21724832_- 0.631136258 0.631136173 0.631136215 7.07E-08 CG11247 FBtr0113184|FBtr0078459|FBtr0078458|FBtr0332769 21724324|21724324|21724324|21724324 21724898|21724898|21724898|21724898 3L - 21724742 21724927 stop_codon CG11247 FlyBase G39104.1 TTGCTACCATGTATATGAAACAGAAGTAGAATCCAGGAGTTGATAGCCAACGCCAAATGCGAGTGTGCCATAGAAGAAGGATTTGTAGAACTAGTTCTTGCCATTTAGTTTAGTGTTTAGTAACCCAAAGTTGCAGAACGAAACCCAACCAAATAATTTATCCCAAAGATATATACTTTGTAGTAC 73 21724833 0.898118888 14 70 581 0.954022989 1.919078092 0.229885057 0.178082192 0.310344828 73 4 0 83 3L:21724742-21724927 8 CG11247 FBtr0332769|FBtr0078458|FBtr0078459|FBtr0113184 21724324|21724324|21724324|21724324 21724898|21724898|21724898|21724898 TCTTGCCA 8mer-A1 dme-miR-31a-5p 3L - 21724759 21724886 3'utr CG11247 FlyBase G29528.1 GATAGCCAACGCCAAATGCGAGTGTGCCATAGAAGAAGGATTTGTAGAACTAGTTCTTGCCATTTAGTTTAGTGTTTAGTAACCCAAAGTTGCAGAACGAAACCCAACCAAATAATTTATCCCAAAGA 58 21724862 0.977256959 13 54 348 0.949367089 1.875061263 0.215189873 0.327586207 0.506329114 58 4 0 75 3L:21724759-21724886 8 24.5 2903 FBgn0037120 533.7966667 23.84666667 36.66 0.045897626 1.02739726 0.668303328 1 30 15.5 0.01 dme-miR-305-3p 7mer-A1 TGTGCCA 3L 21724858 21724864 - 3L_21724858_21724864_- 0.782893814 0.781610012 0.782251913 0.000907784 CG11247 FBtr0113184|FBtr0078459|FBtr0078458|FBtr0332769 21724324|21724324|21724324|21724324 21724898|21724898|21724898|21724898 3L - 21724742 21724927 stop_codon CG11247 FlyBase G39104.1 TTGCTACCATGTATATGAAACAGAAGTAGAATCCAGGAGTTGATAGCCAACGCCAAATGCGAGTGTGCCATAGAAGAAGGATTTGTAGAACTAGTTCTTGCCATTTAGTTTAGTGTTTAGTAACCCAAAGTTGCAGAACGAAACCCAACCAAATAATTTATCCCAAAGATATATACTTTGTAGTAC 73 21724835 0.898118888 14 70 581 0.954022989 1.919078092 0.229885057 0.178082192 0.310344828 73 4 0 83 3L:21724742-21724927 7 CG11247 FBtr0332769|FBtr0078458|FBtr0078459|FBtr0113184 21724324|21724324|21724324|21724324 21724898|21724898|21724898|21724898 TGTGCCA 7mer-A1 dme-miR-305-3p 3L - 21724759 21724886 3'utr CG11247 FlyBase G29528.1 GATAGCCAACGCCAAATGCGAGTGTGCCATAGAAGAAGGATTTGTAGAACTAGTTCTTGCCATTTAGTTTAGTGTTTAGTAACCCAAAGTTGCAGAACGAAACCCAACCAAATAATTTATCCCAAAGA 58 21724864 0.977256959 13 54 348 0.949367089 1.875061263 0.215189873 0.327586207 0.506329114 58 4 0 75 3L:21724759-21724886 7 25.5 2904 FBgn0037120 533.7966667 23.84666667 36.66 0.047770999 1.069331842 0.695581015 -29 0 -14.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 21824146 21824151 + 3L_21824146_21824151_+ 0.824818517 0.723191422 0.77400497 0.071861212 CG7407 FBtr0078440|FBtr0078440|FBtr0078440 21824099|21824099|21824099 21824571|21824571|21824571 3L + 21824034 21824244 stop_codon CG7407 FlyBase G32205.1 GGAATTGAACCTCCAGGACCGAATAAGCGACCAGGATCTCAAGCAGCAGGTGCGGCTCTATCGCTGAAGTGGCGCCGAGCCTGGGCTCACCCTACCTGAATGTACAGACTTGTGTGATCTATTAGTTTAATGTTTAAAATTCCAAGATTTGGTGTTGCCTCATACGGTCCACTAAGTGCGGGCAAGTCTTTAGTCAGAGAGCTATCTCATC 258 21824145 0.999997264 26 248 2332 0.963815789 1.767897616 0.217105263 0.158914729 0.286184211 258 7 4 293 3L:21824034-21824244 6 CG7407 FBtr0078440|FBtr0078440|FBtr0078440 21824099|21824099|21824099 21824571|21824571|21824571 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 21824037 21824169 stop_codon CG7407 FlyBase G24348.1 ATTGAACCTCCAGGACCGAATAAGCGACCAGGATCTCAAGCAGCAGGTGCGGCTCTATCGCTGAAGTGGCGCCGAGCCTGGGCTCACCCTACCTGAATGTACAGACTTGTGTGATCTATTAGTTTAATGTTTA 129 21824145 0.988546648 16 121 1145 0.938547486 1.924279286 0.173184358 0.286821705 0.48603352 129 10 1 168 3L:21824037-21824169 6 139.5 2905 FBgn0037134 80.66666667 9.62 14.74333333 1.729338843 14.5010395 9.461903685 1 1 1 0.01 dme-miR-263a-5p 7mer-m1 TGCCATT 3L 21827008 21827014 + 3L_21827008_21827014_+ 0.765586663 0.765586663 0.765586663 0 CG7414 FBtr0303247|FBtr0303245 21826936|21826936 21827856|21827856 3L + 21826956 21827031 3'utr CG7414 FlyBase G32220.1 TTGTCAGCTCCTAGGCTCCACTCACCTCTTTCACACACATTTTGTATTAGCATGCCATTAGGATTAGGGATTGCGC 23 21827013 0.985561845 11 21 171 0.923076923 1.079181246 0.192307692 0.086956522 0.192307692 23 1 1 24 3L:21826956-21827031 7 CG7414 FBtr0303247|FBtr0303245 21826936|21826936 21827856|21827856 TGCCATT 7mer-m1 dme-miR-263a-5p 3L + 21826983 21827025 3'utr CG7414 FlyBase G24361.1 CTTTCACACACATTTTGTATTAGCATGCCATTAGGATTAGGGA 7 21827007 0.981728126 5 6 46 0.9 0.954242509 0.1 0.285714286 0.5 7 1 0 9 3L:21826983-21827025 7 14 2906 FBgn0037135 1558.176667 79.32666667 121.5733333 0.008984861 0.176485419 0.115156833 -5 1 -2 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 21827151 21827156 + 3L_21827151_21827156_+ 1 1 1 0 CG7414 FBtr0303247|FBtr0303245 21826936|21826936 21827856|21827856 3L + 21827130 21827191 3'utr CG7414 FlyBase G32221.1 AACAGCGAAGCGCTAGGAAGGATGTGAACGTTGTAAATGGTGGCGATGCGGATTCTGCCCCG 6 21827143 0.817768569 3 4 22 0.875 0.84509804 0.375 0.333333333 0.5 6 1 0 7 3L:21827130-21827191 6 CG7414 FBtr0303247|FBtr0303245 21826936|21826936 21827856|21827856 ATGTGA 6mer3-8 dme-miR-1003-3p 3L + 21827125 21827153 3'utr CG7414 FlyBase G24362.1 GAACAAACAGCGAAGCGCTAGGAAGGATG 5 21827143 0.542298585 2 5 4 1 0.903089987 0.5 0.4 0.625 5 0 0 8 3L:21827125-21827153 3 4 2907 FBgn0037135 1558.176667 79.32666667 121.5733333 0.002567103 0.050424405 0.032901952 8 8 8 0.01 dme-miR-184-5p 7mer-m1 GATAAGG 3L 21827363 21827369 + 3L_21827363_21827369_+ 0.825582373 0.825582373 0.825582373 0 CG7414 FBtr0303247|FBtr0303245 21826936|21826936 21827856|21827856 3L + 21827330 21827375 3'utr CG7414 FlyBase G32223.1 GGACAGGGTCATCCCAATGGCCAGCACATCAGCGATAAGGAGCGCA 10 21827358 0.98729041 2 10 21 1 1.041392685 0.272727273 0.1 0.181818182 10 0 0 11 3L:21827330-21827375 7 CG7414 FBtr0303247|FBtr0303245 21826936|21826936 21827856|21827856 GATAAGG 7mer-m1 dme-miR-184-5p 3L + 21827301 21827384 3'utr CG7414 FlyBase G24363.1 ACGCTGCCGATCAGCCACCGAATTCGTATGGACAGGGTCATCCCAATGGCCAGCACATCAGCGATAAGGAGCGCAAGATTCGCA 8 21827358 0.89211106 4 8 27 1 1.176091259 0.333333333 0.75 0.866666667 8 0 0 15 3L:21827301-21827384 7 6.5 2908 FBgn0037135 1558.176667 79.32666667 121.5733333 0.004171542 0.081939659 0.053465672 5 5 5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 21827604 21827610 + 3L_21827604_21827610_+ 0.801967798 0.801970437 0.801969117 1.84E-06 CG7414 FBtr0303247|FBtr0303247|FBtr0303247|FBtr0303245|FBtr0303245|FBtr0303245|FBtr0078441|FBtr0078441|FBtr0078441|FBtr0303246|FBtr0303246|FBtr0303246 21826936|21826936|21826936|21826936|21826936|21826936|21827526|21827526|21827526|21827526|21827526|21827526 21827856|21827856|21827856|21827856|21827856|21827856|21827856|21827856|21827856|21827856|21827856|21827856 3L + 21827549 21827636 3'utr CG7414 FlyBase G32225.1 GATGACGACGGCGGCGAGAAGGCTGAGGGATGCGAGGAGTAATTGCTCTTGTGATTGTGATACAGCACCTCTTCTCAGCTCCACTCCA 119 21827603 0.988126831 14 110 1000 0.912162162 1.528273777 0.121621622 0.193277311 0.351351351 119 10 3 135 3L:21827549-21827636 7 CG7414 FBtr0078441|FBtr0078441|FBtr0078441|FBtr0303246|FBtr0303246|FBtr0303246|FBtr0303247|FBtr0303247|FBtr0303247|FBtr0303245|FBtr0303245|FBtr0303245 21827526|21827526|21827526|21827526|21827526|21827526|21826936|21826936|21826936|21826936|21826936|21826936 21827856|21827856|21827856|21827856|21827856|21827856|21827856|21827856|21827856|21827856|21827856|21827856 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 21827514 21827634 3'utr CG7414 FlyBase G24365.1 AGCAGTCTGCCTAGGAGGACGTTAATGGCGTTGACGATGACGACGGCGGCGAGAAGGCTGAGGGATGCGAGGAGTAATTGCTCTTGTGATTGTGATACAGCACCTCTTCTCAGCTCCACTC 64 21827603 0.941208444 14 62 477 0.98019802 1.995635195 0.287128713 0.4375 0.643564356 64 2 0 99 3L:21827514-21827634 7 80.5 2909 FBgn0037135 1558.176667 79.32666667 121.5733333 0.051662948 1.014791159 0.662151788 1 1 1 0.01 dme-miR-965-3p 6mer3-8 TACGCT 3L 21827674 21827679 + 3L_21827674_21827679_+ 1 1 1 0 CG7414 FBtr0303247|FBtr0303245|FBtr0078441|FBtr0303246 21826936|21826936|21827526|21827526 21827856|21827856|21827856|21827856 3L + 21827643 21827691 3'utr CG7414 FlyBase G32226.1 TCACCTCCTGTTCGTCCCCTTCCTGCTGTTTTACGCTCAGTTTGTGGCC 15 21827673 0.736859488 6 12 143 0.85 1.230448921 0.05 0.333333333 0.5 15 3 0 17 3L:21827643-21827691 6 CG7414 FBtr0078441|FBtr0303246|FBtr0303247|FBtr0303245 21827526|21827526|21826936|21826936 21827856|21827856|21827856|21827856 TACGCT 6mer3-8 dme-miR-965-3p 3L + 21827643 21827692 3'utr CG7414 FlyBase G24366.1 TCACCTCCTGTTCGTCCCCTTCCTGCTGTTTTACGCTCAGTTTGTGGCCC 9 21827673 0.722351232 5 8 69 1 1.113943352 0.153846154 0.333333333 0.538461538 9 0 0 13 3L:21827643-21827692 6 8 2910 FBgn0037135 1558.176667 79.32666667 121.5733333 0.005134206 0.100848811 0.065803904 1 1 1 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3L 21827734 21827740 + 3L_21827734_21827740_+ 0.521223855 0.521223855 0.521223855 0 CG7414 FBtr0303247|FBtr0303245|FBtr0078441|FBtr0303246 21826936|21826936|21827526|21827526 21827856|21827856|21827856|21827856 3L + 21827711 21827764 3'utr CG7414 FlyBase G32227.1 AAGTTAAAACATTTTTCTACTATTGTGATTTCCCAACTAATTTCGGCAAAACGT 194 21827740 0.734981933 9 190 1861 0.984 2.089905111 0.004 0.25257732 0.42 194 3 1 246 3L:21827711-21827764 7 CG7414 FBtr0078441|FBtr0303246|FBtr0303247|FBtr0303245 21827526|21827526|21826936|21826936 21827856|21827856|21827856|21827856 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 21827712 21827777 3'utr CG7414 FlyBase G24367.1 AGTTAAAACATTTTTCTACTATTGTGATTTCCCAACTAATTTCGGCAAAACGTACAGTAACTCCCG 138 21827740 0.729529215 8 131 1324 0.955 1.37794338 0.015 0.362318841 0.56 138 2 7 191 3L:21827712-21827777 7 163.5 2911 FBgn0037135 1558.176667 79.32666667 121.5733333 0.104930335 2.061097571 1.344867295 -6 -6 -6 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 3L 21836252 21836257 + 3L_21836252_21836257_+ 1 1 1 0 Nopp140 FBtr0332811|FBtr0089579|FBtr0332812|FBtr0089580 21835879|21836134|21836134|21835879 21836685|21836685|21836685|21836685 3L + 21836170 21836321 3'utr Nopp140 FlyBase G32242.1 CGGATATAACTAACTAGTTTAAGTAAAATATTTGCCTTACGCAATAGTTCCGCCAACATGTAAATTCTTTCCAAACTCTTGATTGACTTCGGGAAGTCCGTACTTCCGTTTTAATGTGAATTATTCGAATGCAAATTGGCGGTCGACAAACC 39 21836251 0.984261835 18 36 293 0.954545455 1.322219295 0.113636364 0.128205128 0.227272727 39 1 1 42 3L:21836170-21836321 6 Nopp140 FBtr0089580|FBtr0332812|FBtr0089579|FBtr0332811 21835879|21836134|21836134|21835879 21836685|21836685|21836685|21836685 TTGACT 6mer3-8 dme-miR-1012-3p 3L + 21836208 21836312 3'utr Nopp140 FlyBase G24377.1 ACGCAATAGTTCCGCCAACATGTAAATTCTTTCCAAACTCTTGATTGACTTCGGGAAGTCCGTACTTCCGTTTTAATGTGAATTATTCGAATGCAAATTGGCGGT 12 21836252 0.98718481 8 12 96 1 1.301029996 0.15 0.5 0.7 12 0 0 20 3L:21836208-21836312 6 9 2912 FBgn0037137 2382.533333 99.02333333 152.5933333 0.003777492 0.09088767 0.058980296 1 0 0.5 0.01 dme-miR-970-3p 7mer-A1 CTTATGA 3L 21836576 21836582 + 3L_21836576_21836582_+ 0.823349562 0.737190995 0.780270279 0.06092333 Nopp140 FBtr0332811|FBtr0089579|FBtr0332812|FBtr0089580 21835879|21836134|21836134|21835879 21836685|21836685|21836685|21836685 3L + 21836506 21836589 3'utr Nopp140 FlyBase G32245.1 TTTCAGACGCTTGGGTTAAATGAAGGGTTGAATTTTCCGCTAACTTGTGGTGATAGCCGGTTTATGAATGCTTATGACAACTTC 16 21836551 0.986985215 9 15 135 0.941176471 0.903089987 0.176470588 0.0625 0.117647059 16 0 1 16 3L:21836506-21836589 7 Nopp140 FBtr0089580|FBtr0332812|FBtr0089579|FBtr0332811 21835879|21836134|21836134|21835879 21836685|21836685|21836685|21836685 CTTATGA 7mer-A1 dme-miR-970-3p 3L + 21836523 21836589 3'utr Nopp140 FlyBase G24378.1 AAATGAAGGGTTGAATTTTCCGCTAACTTGTGGTGATAGCCGGTTTATGAATGCTTATGACAACTTC 13 21836570 0.754474992 5 13 108 1 1.278753601 0.105263158 0.461538462 0.631578947 13 0 0 19 3L:21836523-21836589 7 5 2913 FBgn0037137 2382.533333 99.02333333 152.5933333 0.002098607 0.05049315 0.032766831 25 6 15.5 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3L 21837137 21837143 - 3L_21837137_21837143_- 0.443131017 0.443131018 0.443131017 0 P5CDh1 FBtr0332813|FBtr0303031|FBtr0078446|FBtr0078447|FBtr0078445 21836663|21836663|21836663|21836663|21836663 21837488|21837488|21837488|21837488|21837488 3L - 21837121 21837223 3'utr P5CDh1 FlyBase G39122.1 CTTCGAACTACAAACACACCATGACATGGATATTTTAAATGAATACTATGTAATATCATTATTTTACGATTTAAACGCAATGTGATTATTTAATTATATATGA 47 21837135 0.988599795 15 45 419 0.964912281 1.263241435 0.280701754 0.191489362 0.333333333 47 0 2 55 3L:21837121-21837223 7 P5CDh1 FBtr0078445|FBtr0078446|FBtr0078447|FBtr0332813|FBtr0303031 21836663|21836663|21836663|21836663|21836663 21837488|21837488|21837488|21837488|21837488 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 21837092 21837156 3'utr P5CDh1 FlyBase G29542.1 GATTTAAACGCAATGTGATTATTTAATTATATATGATTTATAATTAAATGGCCCGCCTTATGTTT 23 21837135 0.992063414 8 21 233 0.903225806 1.146128036 0.258064516 0.304347826 0.483870968 23 2 1 28 3L:21837092-21837156 7 31 2914 FBgn0037138 509.79 22.77333333 34.87 0.060809353 1.361241218 0.889016346 -8 -8 -8 0.01 dme-miR-968-5p 6mer3-8 ACTACT 3L 21837410 21837415 - 3L_21837410_21837415_- 1 1 1 0 P5CDh1 FBtr0332813|FBtr0303031|FBtr0078446|FBtr0078447|FBtr0078445 21836663|21836663|21836663|21836663|21836663 21837488|21837488|21837488|21837488|21837488 3L - 21837410 21837506 stop_codon P5CDh1 FlyBase G39124.1 CCATACATGTGCGAGTAAGCTGGCCGACAGAAGATGCGCAAGGGGAATGGGATGAGCAAAAGTAGTGAAAACCAGACAGGAATCTCATATAACTACT 19 21837419 0.917950468 7 16 58 0.863636364 1.278753601 0.181818182 0.105263158 0.227272727 19 3 0 19 3L:21837410-21837506 5 P5CDh1 FBtr0078445|FBtr0078446|FBtr0078447|FBtr0332813|FBtr0303031 21836663|21836663|21836663|21836663|21836663 21837488|21837488|21837488|21837488|21837488 ACTACT 6mer3-8 dme-miR-968-5p 3L - 21837390 21837471 3'utr P5CDh1 FlyBase G29544.1 GCGCAAGGGGAATGGGATGAGCAAAAGTAGTGAAAACCAGACAGGAATCTCATATAACTACTAACTATATAAACATACTTAA 9 21837418 0.937811203 7 8 30 1 1.113943352 0.307692308 0.333333333 0.538461538 9 0 0 13 3L:21837390-21837471 6 4 2915 FBgn0037138 509.79 22.77333333 34.87 0.007846368 0.175644028 0.114711787 4 3 3.5 0.01 dme-miR-79-3p 7mer-A1 AGCTTTA 3L 21923272 21923278 + 3L_21923272_21923278_+ 0.823349562 0.823349562 0.823349562 0 mub FBtr0301364|FBtr0111017|FBtr0304983|FBtr0304980|FBtr0304984 21923187|21923187|21923187|21923187|21923187 21924114|21932702|21924114|21924114|21924114 3L + 21923181 21923279 stop_codon mub FlyBase G32251.1 CGTACTAGGGGTAGGGCTGCAGCTGCGTTAGCTGGAGAGCAGTGGAGATATAGTCCCGTAGATATATAGGTTTTCATGGTAGCGTTGCGAAAGCTTTAG 22 21923265 0.982592127 9 20 154 0.956521739 1.342422681 0.304347826 0.045454545 0.086956522 22 1 0 22 3L:21923181-21923279 7 mub FBtr0304980|FBtr0304984|FBtr0111017|FBtr0304983|FBtr0301364 21923187|21923187|21923187|21923187|21923187 21924114|21924114|21932702|21924114|21924114 AGCTTTA 7mer-A1 dme-miR-79-3p 3L + 21923210 21923289 3'utr mub FlyBase G24382.1 AGCTGGAGAGCAGTGGAGATATAGTCCCGTAGATATATAGGTTTTCATGGTAGCGTTGCGAAAGCTTTAGTCTTTAGATT 13 21923257 0.829339798 5 11 101 0.882352941 1.176091259 0 0.307692308 0.470588235 13 2 0 15 3L:21923210-21923289 7 6.5 2916 FBgn0262737 2368.09 79.81333333 123.0033333 0.002744828 0.081440027 0.052844096 7 15 11 0.01 dme-miR-970-3p 6mer2-7 CTTATG 3L 21923326 21923331 + 3L_21923326_21923331_+ 1 1 1 0 mub FBtr0301364|FBtr0111017|FBtr0304983|FBtr0304980|FBtr0304984 21923187|21923187|21923187|21923187|21923187 21924114|21932702|21924114|21924114|21924114 3L + 21923306 21923341 3'utr mub FlyBase G32252.1 TGTATAAAATTCGCTTTAAACTTATGTGGTATGCAT 6 21923328 0.9841719 2 6 45 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3L:21923306-21923341 6 mub FBtr0304980|FBtr0304984|FBtr0111017|FBtr0304983|FBtr0301364 21923187|21923187|21923187|21923187|21923187 21924114|21924114|21932702|21924114|21924114 CTTATG 6mer2-7 dme-miR-970-3p 3L + 21923306 21923356 3'utr mub FlyBase G24383.1 TGTATAAAATTCGCTTTAAACTTATGTGGTATGCATACAATTTGCAAACGT 7 21923328 0.990100258 2 6 59 0.857142857 1.079181246 0.071428571 0.428571429 0.714285714 7 2 0 12 3L:21923306-21923356 6 6.5 2917 FBgn0262737 2368.09 79.81333333 123.0033333 0.002744828 0.081440027 0.052844096 -2 -2 -2 0.01 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 21923529 21923536 + 3L_21923529_21923536_+ 0.668734347 0.668734347 0.668734347 0 mub FBtr0301364|FBtr0111017|FBtr0304983|FBtr0304980|FBtr0304984 21923187|21923187|21923187|21923187|21923187 21924114|21932702|21924114|21924114|21924114 3L + 21923504 21923546 3'utr mub FlyBase G32253.1 AGTCACACTTAGATTAGCCGCATAGGGCAGCTAGAGATTTGAA 44 21923526 0.970701398 3 42 174 0.92 1.662757832 0.44 0.113636364 0.22 44 4 0 46 3L:21923504-21923546 8 mub FBtr0304980|FBtr0304984|FBtr0111017|FBtr0304983|FBtr0301364 21923187|21923187|21923187|21923187|21923187 21924114|21924114|21932702|21924114|21924114 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L + 21923510 21923548 3'utr mub FlyBase G24384.1 ACTTAGATTAGCCGCATAGGGCAGCTAGAGATTTGAATA 19 21923526 0.962822412 3 18 82 1 1.505149978 0.375 0.368421053 0.625 19 0 0 32 3L:21923510-21923548 8 31 2918 FBgn0262737 2368.09 79.81333333 123.0033333 0.013090719 0.388406281 0.25202569 3 3 3 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 3L 21923940 21923945 + 3L_21923940_21923945_+ 0.99999813 0.99999813 0.99999813 0 mub FBtr0301364|FBtr0301364|FBtr0111017|FBtr0111017|FBtr0304983|FBtr0304983|FBtr0304980|FBtr0304980|FBtr0304984|FBtr0304984 21923187|21923187|21923187|21923187|21923187|21923187|21923187|21923187|21923187|21923187 21924114|21924114|21932702|21932702|21924114|21924114|21924114|21924114|21924114|21924114 3L + 21923941 21923980 3'utr mub FlyBase G32254.1 ACTTATAATCAATTGTACTCTCTTAGATAGTAAGCACTAA 39 21923963 0.627941341 6 35 330 0.916666667 1.643452676 0.041666667 0.205128205 0.354166667 39 4 0 44 3L:21923941-21923980 4 mub FBtr0304980|FBtr0304980|FBtr0304984|FBtr0304984|FBtr0111017|FBtr0111017|FBtr0304983|FBtr0304983|FBtr0301364|FBtr0301364 21923187|21923187|21923187|21923187|21923187|21923187|21923187|21923187|21923187|21923187 21924114|21924114|21924114|21924114|21932702|21932702|21924114|21924114|21924114|21924114 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 3L + 21923943 21923979 3'utr mub FlyBase G24385.1 TTATAATCAATTGTACTCTCTTAGATAGTAAGCACTA 20 21923963 0.614865365 5 19 170 0.96875 1.491361694 0.03125 0.3 0.5625 20 1 0 31 3L:21923943-21923979 2 5.5 2919 FBgn0262737 2368.09 79.81333333 123.0033333 0.002322547 0.068910792 0.044714235 -23 -23 -23 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 3L 21926166 21926172 + 3L_21926166_21926172_+ 0.758218214 0.823349542 0.790783878 0.046054784 mub FBtr0346820|FBtr0078468|FBtr0333222|FBtr0332736|FBtr0304981|FBtr0304982|FBtr0078470|FBtr0111017 21925263|21925263|21925263|21925263|21925263|21925263|21925263|21923187 21932702|21926699|21932702|21926225|21926699|21926699|21932702|21932702 3L + 21926125 21926199 3'utr mub FlyBase G32257.1 AATTGTTATCGAAATTGTATTTGTGATTTTTGAATATGTTTAGACTGATGTGCAAAATTGATTCTGTTTATTAAT 74 21926164 0.72437265 13 73 763 0.99 1.995635195 0.45 0.297297297 0.48 74 1 0 99 3L:21926125-21926199 7 mub FBtr0111017|FBtr0304982|FBtr0346820|FBtr0304981|FBtr0078468|FBtr0078470|FBtr0333222|FBtr0332736 21923187|21925263|21925263|21925263|21925263|21925263|21925263|21925263 21932702|21926699|21932702|21926699|21926699|21932702|21932702|21926225 AGACTGA 7mer-A1 dme-miR-14-3p 3L + 21926127 21926200 3'utr mub FlyBase G24387.1 TTGTTATCGAAATTGTATTTGTGATTTTTGAATATGTTTAGACTGATGTGCAAAATTGATTCTGTTTATTAATT 58 21926164 0.720590759 13 53 594 0.884057971 1.785329835 0.608695652 0.189655172 0.31884058 58 8 0 61 3L:21926127-21926200 7 35.5 2920 FBgn0262737 2368.09 79.81333333 123.0033333 0.014990984 0.444787838 0.288610065 2 2 2 0.01 dme-miR-190-5p 6mer3-8 ACATAT 3L 21926216 21926221 + 3L_21926216_21926221_+ 1 1 1 0 mub FBtr0346820|FBtr0078468|FBtr0333222|FBtr0304981|FBtr0304982|FBtr0078470|FBtr0111017 21925263|21925263|21925263|21925263|21925263|21925263|21923187 21932702|21926699|21932702|21926699|21926699|21932702|21932702 3L + 21926214 21926341 3'utr mub FlyBase G32258.1 ATACATATAAACAATTATGGACTAATTAATATATCTCTCTCCTTCGTTCTATATTCTAATCAAATTACTCATTTATTCAAAATTAGACTTAATTTGTTGGCTGCAACCAACGTGATAAACGAACATCT 18 21926231 0.966520235 11 17 130 0.952380952 1.301029996 0.095238095 0.166666667 0.285714286 18 1 0 20 3L:21926214-21926341 6 mub FBtr0111017|FBtr0304982|FBtr0346820|FBtr0304981|FBtr0078468|FBtr0078470|FBtr0333222 21923187|21925263|21925263|21925263|21925263|21925263|21925263 21932702|21926699|21932702|21926699|21926699|21932702|21932702 ACATAT 6mer3-8 dme-miR-190-5p 3L + 21926216 21926248 3'utr mub FlyBase G24388.1 ACATATAAACAATTATGGACTAATTAATATATC 11 21926231 0.766250542 3 11 74 1 1.255272505 0 0.454545455 0.666666667 11 0 0 18 3L:21926216-21926248 5 5.5 2921 FBgn0262737 2368.09 79.81333333 123.0033333 0.002322547 0.068910792 0.044714235 -15 -15 -15 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3L 21926515 21926520 + 3L_21926515_21926520_+ 1 1 1 0 mub FBtr0346820|FBtr0078468|FBtr0333222|FBtr0304981|FBtr0304982|FBtr0078470|FBtr0111017 21925263|21925263|21925263|21925263|21925263|21925263|21923187 21932702|21926699|21932702|21926699|21926699|21932702|21932702 3L + 21926497 21926535 3'utr mub FlyBase G32259.1 ACTTTTGCGGCGATTAAAAAGACTTTCTGAAGCGTGGAA 11 21926522 0.645501742 4 11 63 1 1.079181246 0.333333333 0.090909091 0.166666667 11 0 0 12 3L:21926497-21926535 6 mub FBtr0111017|FBtr0304982|FBtr0346820|FBtr0304981|FBtr0078468|FBtr0078470|FBtr0333222 21923187|21925263|21925263|21925263|21925263|21925263|21925263 21932702|21926699|21932702|21926699|21926699|21932702|21932702 AAGACT 6mer3-8 dme-miR-14-3p 3L + 21926489 21926533 3'utr mub FlyBase G24389.1 TTTTAAGCACTTTTGCGGCGATTAAAAAGACTTTCTGAAGCGTGG 6 21926523 0.906069804 3 4 39 0.636363636 0.84509804 0.727272727 0.333333333 0.636363636 6 4 0 7 3L:21926489-21926533 6 7.5 2922 FBgn0262737 2368.09 79.81333333 123.0033333 0.003167109 0.093969262 0.060973957 -7 -8 -7.5 0.01 dme-miR-8-3p 6mer2-7 AGTATT 3L 21938973 21938978 - 3L_21938973_21938978_- 1 1 1 0 DNApol-eta FBtr0078489 21938632 21938999 3L - 21938926 21938993 3'utr DNApol-eta FlyBase G39135.1 CCTTACACCGCTCCAAGTATTTGAACCTGTATAAGTACCTACGAATGGACCACAGACAAATTTACTTC 17 21938973 0.971482558 7 17 96 1 1.278753601 0.105263158 0.117647059 0.210526316 17 0 0 19 3L:21938926-21938993 6 DNApol-eta FBtr0078489 21938632 21938999 AGTATT 6mer2-7 dme-miR-8-3p 3L - 21938938 21938992 3'utr DNApol-eta FlyBase G29554.1 CTTACACCGCTCCAAGTATTTGAACCTGTATAAGTACCTACGAATGGACCACAGA 10 21938973 0.980305413 5 9 60 0.916666667 1.041392685 0 0.2 0.333333333 10 1 0 11 3L:21938938-21938992 6 12.5 2923 FBgn0037141 470.7833333 18.66 28.63 0.026551492 0.669882101 0.43660496 -5 -5 -5 0.01 dme-miR-283-5p 8mer-A1 TGATATTA 3L 21949406 21949413 + 3L_21949406_21949413_+ 0.592192292 0.589156906 0.590674599 0.002146352 CG14562 FBtr0078472|FBtr0334088 21949341|21949341 21949452|21949866 3L + 21949388 21949421 3'utr CG14562 FlyBase G32275.1 ATTGAAAATTGATAAGATTGATATTAACGTAGCA 14 21949403 0.7541915 3 11 110 0.857142857 1.079181246 0.142857143 0 0 14 2 0 12 3L:21949388-21949421 8 CG14562 FBtr0334088|FBtr0078472 21949341|21949341 21949866|21949452 TGATATTA 8mer-A1 dme-miR-283-5p 3L + 21949388 21949421 3'utr CG14562 FlyBase G24399.1 ATTGAAAATTGATAAGATTGATATTAACGTAGCA 13 21949405 0.742074261 3 13 91 1 1.397940009 0.12 0.538461538 0.76 13 0 0 25 3L:21949388-21949421 8 13.5 2924 FBgn0037142 391.14 8.676666667 13.24 0.034514496 1.555897042 1.019637462 3 1 2 0.01 dme-miR-1007-3p 6mer3-8 TGAGCT 3L 21949569 21949574 + 3L_21949569_21949574_+ 1 0.999741054 0.999870527 0.00018307 CG14562 FBtr0334088 21949341 21949866 3L + 21949538 21949582 3'utr CG14562 FlyBase G32277.1 GAATACTCTAGCCTTCGGTGATTTATGAAACTGAGCTGACGAGGA 18 21949560 0.592015812 6 17 137 0.909090909 1.301029996 0.318181818 0.222222222 0.363636364 18 2 0 20 3L:21949538-21949582 6 CG14562 FBtr0334088 21949341 21949866 TGAGCT 6mer3-8 dme-miR-1007-3p 3L + 21949527 21949575 3'utr CG14562 FlyBase G24400.1 ACACAACATTCGAATACTCTAGCCTTCGGTGATTTATGAAACTGAGCTG 12 21949561 0.982631994 9 12 90 1 1.204119983 0.5625 0.25 0.4375 12 0 0 16 3L:21949527-21949575 6 5 2925 FBgn0037142 391.14 8.676666667 13.24 0.012783147 0.576258164 0.377643505 9 8 8.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 3L 22066799 22066805 + 3L_22066799_22066805_+ 0.823349562 0.823349562 0.823349562 0 CG14561 FBtr0078480|FBtr0334111 22066716|22066716 22066967|22067216 3L + 22066714 22066833 stop_codon CG14561 FlyBase G32292.1 CTAGTGACCGCAGTCCAGCCTTCCCAACCAAAGCCATGGAGCCCTCGCTCAGACTGCCATCGATGTTCTAGAATAAGTTACCATTTACCTGAATGTATTGTTCACACCCAGCGGTCAGCA 128 22066797 0.985488387 14 123 1012 0.96835443 1.582631439 0.46835443 0.1796875 0.335443038 128 2 3 153 3L:22066714-22066833 7 CG14561 FBtr0334111|FBtr0078480 22066716|22066716 22067216|22066967 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3L + 22066745 22066827 3'utr CG14561 FlyBase G24408.1 AGCCATGGAGCCCTCGCTCAGACTGCCATCGATGTTCTAGAATAAGTTACCATTTACCTGAATGTATTGTTCACACCCAGCGG 110 22066797 0.964249231 10 101 852 0.907407407 1.264227348 0.50617284 0.327272727 0.543209877 110 8 7 147 3L:22066745-22066827 7 108 2926 FBgn0037149 161.3333333 18.83333333 28.89 0.669421488 5.734513274 3.738317757 2 2 2 0.01 dme-miR-7-5p 7mer-A1 TCTTCCA 3L 22067456 22067462 - 3L_22067456_22067462_- 0.823349562 0.823349562 0.823349562 0 CG7139 FBtr0078486 22067268 22067774 3L - 22067446 22067583 3'utr CG7139 FlyBase G39144.2 ATTACTCTATATTACTTTCAATGCTCGTCCCAATTATTTTTAAGTTTGAATAATGCTTCCAGCGTAGAGTTTGTGTACGACGCGAATTCGCAATGCGACTCAGGAAAGTAGTGATTTAGTATCTTCCAATAATATACC 273 22067468 0.765860806 22 267 1892 0.98470948 2.206825876 0.100917431 0.175824176 0.311926606 273 4 1 322 3L:22067446-22067583 7 CG7139 FBtr0078486 22067268 22067774 TCTTCCA 7mer-A1 dme-miR-7-5p 3L - 22067378 22067503 3'utr CG7139 FlyBase G29559.1 CGCGAATTCGCAATGCGACTCAGGAAAGTAGTGATTTAGTATCTTCCAATAATATACCTAATCACAGAATTACTTATTTTTATACTAGTTTACTCAATGTACTACCTAGGTACAATAGGATTAGTG 211 22067468 0.80987533 15 206 1415 0.977198697 2.477121255 0.136807818 0.327014218 0.537459283 211 7 0 300 3L:22067378-22067503 7 83 2927 FBgn0027532 579.5366667 19.16 29.21666667 0.143217858 4.331941545 2.840844267 6 6 6 0.01 dme-miR-995-5p 6mer3-8 AATTCG 3L 22075071 22075076 - 3L_22075071_22075076_- 1 1 1 0 CG7130 FBtr0078484 22075054 22075247 3L - 22075054 22075084 3'utr CG7130 FlyBase G39166.1 AATTATGGAATTCGTCCGACTGTTGCTCGAA 5 22075062 0.717052902 2 5 29 1 0.84509804 0.428571429 0.2 0.428571429 5 0 0 7 3L:22075054-22075084 6 CG7130 FBtr0078484 22075054 22075247 AATTCG 6mer3-8 dme-miR-995-5p 3L - 22075042 22075080 3'utr CG7130 FlyBase G29574.1 ATGGAATTCGTCCGACTGTTGCTCGAAAATAGCTAATAC 6 22075062 0.971367133 3 6 38 1 0.903089987 0.25 0.166666667 0.375 6 0 0 8 3L:22075042-22075080 6 5.5 2928 FBgn0037151 176 32.25666667 49.12666667 0.03125 0.170507389 0.111955489 -14 -14 -14 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 3L 22075151 22075156 - 3L_22075151_22075156_- 1 1 1 0 CG7130 FBtr0078484 22075054 22075247 3L - 22075117 22075220 3'utr CG7130 FlyBase G39167.1 AATCTCGGGTACCTAGCGTTCTTCGCTGAATAGTCTTTAAGATTAATTTATAGGAACTTAATTATTGACTGTTTATCTAATGAATCCTGCGTTACTTATTGATT 73 22075158 0.686629901 23 69 696 0.952941176 1.306425028 0.105882353 0.150684932 0.270588235 73 1 3 81 3L:22075117-22075220 6 CG7130 FBtr0078484 22075054 22075247 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 22075113 22075172 3'utr CG7130 FlyBase G29575.1 TATAGGAACTTAATTATTGACTGTTTATCTAATGAATCCTGCGTTACTTATTGATTAATT 50 22075157 0.710011617 13 49 471 0.959459459 1.851258349 0.094594595 0.38 0.581081081 50 3 0 71 3L:22075113-22075172 6 39 2929 FBgn0037151 176 32.25666667 49.12666667 0.221590909 1.209052392 0.793866196 2 1 1.5 0.01 dme-miR-92b-3p 7mer-A1 TGCAATA 3L 22257836 22257842 - 3L_22257836_22257842_- 0.782911824 0.782911824 0.782911824 0 Rich FBtr0078512 22257747 22258138 3L - 22257823 22257902 3'utr Rich FlyBase G39171.1 AACCGTAAAACCGTATGAAGCATACGCAACGTAATCCATAATTTAGTAGATGAAATTTGCTGCAATATTTGTTAATTAAA 15 22257846 0.984044994 9 15 129 1 1.230448921 0.176470588 0.066666667 0.176470588 15 0 0 17 3L:22257823-22257902 7 Rich FBtr0078512 22257747 22258138 TGCAATA 7mer-A1 dme-miR-92b-3p 3L - 22257824 22257858 3'utr Rich FlyBase G29578.1 AGTAGATGAAATTTGCTGCAATATTTGTTAATTAA 6 22257846 0.786487377 3 6 57 1 1.113943352 0 0.5 0.769230769 6 0 0 13 3L:22257824-22257858 7 8 2930 FBgn0028500 540.74 13.42666667 20.61333333 0.014794541 0.595829196 0.388098318 4 4 4 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3L 22265808 22265814 - 3L_22265808_22265814_- 0.521223855 0.521223855 0.521223855 0 CG11523 FBtr0078511 22265804 22266077 3L - 22265799 22265866 3'utr CG11523 FlyBase G39183.1 AAATGTCGCTCCAGATCCGCGTTAGACCTTAAGACGTTTCAAGAATAAAGATTGTGATTGCAACTCTA 173 22265815 0.650947509 11 163 988 0.947136564 1.55428721 0.061674009 0.231213873 0.414096916 173 7 5 215 3L:22265799-22265866 7 CG11523 FBtr0078511 22265804 22266077 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 22265799 22265880 3'utr CG11523 FlyBase G29587.1 CTTGCATAGCAAACAAATGTCGCTCCAGATCCGCGTTAGACCTTAAGACGTTTCAAGAATAAAGATTGTGATTGCAACTCTA 118 22265815 0.826435357 9 114 669 0.97826087 1.77815125 0.076086957 0.43220339 0.635869565 118 2 2 180 3L:22265799-22265880 7 139 2931 FBgn0037156 234.9133333 34.43333333 53.07666667 0.59170758 4.03678606 2.618853231 1 1 1 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA 3L 22265904 22265909 + 3L_22265904_22265909_+ 1 1 1 0 Ddx1 FBtr0078492 22265844 22266017 3L + 22265848 22265940 3'utr Ddx1 FlyBase G32325.1 CGGATCTGGAGCGACATTTGTTTGCTATGCAAGGAAAGGATGTGGTGAATTGAGAAGTGCAAGACCAACTCACGCGGAAATACTTTTGCGGCA 43 22265905 0.988503108 4 42 230 0.97826087 1.653212514 0.304347826 0.069767442 0.130434783 43 1 0 45 3L:22265848-22265940 6 Ddx1 FBtr0078492 22265844 22266017 GTGCAA 6mer3-8 dme-miR-92b-3p 3L + 22265863 22265927 3'utr Ddx1 FlyBase G24432.1 ATTTGTTTGCTATGCAAGGAAAGGATGTGGTGAATTGAGAAGTGCAAGACCAACTCACGCGGAAA 19 22265905 0.995590542 3 19 90 1 1.531478917 0.176470588 0.526315789 0.735294118 19 0 0 34 3L:22265863-22265927 6 18 2932 FBgn0015075 283.7533333 13.87333333 21.15666667 0.063435378 1.297453148 0.850795651 -1 -1 -1 0.01 dme-miR-2535b-3p 7mer-m1 CGTGAGT 3L 22265915 22265921 - 3L_22265915_22265921_- 0.765586663 0.765586663 0.765586663 0 CG11523 FBtr0078511 22265804 22266077 3L - 22265875 22265997 3'utr CG11523 FlyBase G39184.1 ATTTTTAATAGCAGAGCTTGAGCTCCGACTTCCTACATATACAAAATTGTGTGTTTGTGCCGCAAAAGTATTTCCGCGTGAGTTGGTCTTGCACTTCTCAATTCACCACATCCTTTCCTTGCA 30 22265926 0.982738753 17 28 211 0.944444444 1.531478917 0.111111111 0.166666667 0.305555556 30 2 0 34 3L:22265875-22265997 7 CG11523 FBtr0078511 22265804 22266077 CGTGAGT 7mer-m1 dme-miR-2535b-3p 3L - 22265911 22265940 3'utr CG11523 FlyBase G29588.1 TGCCGCAAAAGTATTTCCGCGTGAGTTGGT 5 22265925 0.733806221 2 4 26 1 0.954242509 0.111111111 0.4 0.666666667 5 0 0 9 3L:22265911-22265940 7 7 2933 FBgn0037156 234.9133333 34.43333333 53.07666667 0.029798223 0.203291384 0.131884695 5 4 4.5 0.01 dme-miR-282-5p 6mer2-7 GAGGCT 3L 22266046 22266051 - 3L_22266046_22266051_- 1 1 1 0 CG11523 FBtr0078511 22265804 22266077 3L - 22266004 22266076 3'utr CG11523 FlyBase G39185.1 GGTAACCGGACTCCAGCTTTCAAACGAGGCTGTTTACTCTTTAGACAGACGATTTTAATGTTAGTTTAATTAA 23 22266043 0.684492009 11 23 169 1 1.462397998 0.24137931 0.260869565 0.413793103 23 0 0 29 3L:22266004-22266076 6 CG11523 FBtr0078511 22265804 22266077 GAGGCT 6mer2-7 dme-miR-282-5p 3L - 22266028 22266084 stop_codon CG11523 FlyBase G29589.1 GAAGTGACGGTAACCGGACTCCAGCTTTCAAACGAGGCTGTTTACTCTTTAGACAGA 13 22266043 0.923026395 7 12 84 0.9 1.255272505 0.15 0.384615385 0.6 13 2 0 18 3L:22266028-22266084 6 15 2934 FBgn0037156 234.9133333 34.43333333 53.07666667 0.063853336 0.435624395 0.282610061 -8 -8 -8 0.01 dme-miR-190-5p 6mer3-8 ACATAT 3L 22272243 22272248 + 3L_22272243_22272248_+ 1 1 1 0 Csp FBtr0078493|FBtr0334746|FBtr0334747 22271769|22271769|22271769 22273745|22272348|22273745 3L + 22272211 22272252 3'utr Csp FlyBase G32333.1 AAATGAAATGAAAATTTTAATTTCCATCCAAGACATATTCAA 41 22272232 0.719096311 4 41 311 1 1.653212514 0.155555556 0.097560976 0.177777778 41 0 0 45 3L:22272211-22272252 6 Csp FBtr0334747|FBtr0334746|FBtr0078493 22271769|22271769|22271769 22273745|22272348|22273745 ACATAT 6mer3-8 dme-miR-190-5p 3L + 22272213 22272256 3'utr Csp FlyBase G24437.1 ATGAAATGAAAATTTTAATTTCCATCCAAGACATATTCAAAGAA 24 22272232 0.705548613 4 24 183 1 1.591064607 0.128205128 0.416666667 0.641025641 24 0 0 39 3L:22272213-22272256 6 29 2935 FBgn0004179 1541.363333 81.29333333 124.7033333 0.018814513 0.356732819 0.232551923 11 11 11 0.01 dme-miR-33-5p 6mer2-7 AATGCA 3L 22293179 22293184 - 3L_22293179_22293184_- 1 1 1 0 Ten-m FBtr0078509 22293042 22295587 3L - 22293047 22293427 3'utr Ten-m FlyBase G39206.1 GGTCCTCTGTTCTTAAAATACTTTGATCTGTACATTTTCAGGATGGGGCAAAAGCTTAACCTACTTAATTAGTTGAGATCATGATTAGGCATATTAACTGACTAACGAAAAAGGCCAGTCCGTTAAGGCAGTTTGAGCATACATAAATTGCGAACAATAATTGTATTTAATGTACGAAATTGTCTTTAAAATATATGGATACCGAGAGAAGTGCAGAGGGTATAGGCTATAAATTACAAATCGAATGCAGACAACAAAGACAATTGTACACAAAGAAATAATTATGGCAAGCCGATATACATACATGATAAAACATCCATATAAATATATATAATAACTAATAATATTACGAGTAAAAAGCGATTTCAATAAAAATGAAAA 175 22293205 0.925795772 47 167 966 0.962264151 1.610660163 0.179245283 0.16 0.306603774 175 4 4 204 3L:22293047-22293427 6 Ten-m FBtr0078509 22293042 22295587 AATGCA 6mer2-7 dme-miR-33-5p 3L - 22293151 22293236 3'utr Ten-m FlyBase G29609.1 TATATGGATACCGAGAGAAGTGCAGAGGGTATAGGCTATAAATTACAAATCGAATGCAGACAACAAAGACAATTGTACACAAAGAA 39 22293205 0.878572998 10 39 143 1 1.763427994 0.155172414 0.41025641 0.603448276 39 0 0 58 3L:22293151-22293236 6 18.5 2936 FBgn0004449 644.2766667 6.713333333 10.31666667 0.028714372 2.75571003 1.793214863 21 21 21 0.01 dme-bantam-3p 6mer3-8 TGATCT 3L 22293399 22293404 - 3L_22293399_22293404_- 1 1 1 0 Ten-m FBtr0078509 22293042 22295587 3L - 22293047 22293427 3'utr Ten-m FlyBase G39206.1 GGTCCTCTGTTCTTAAAATACTTTGATCTGTACATTTTCAGGATGGGGCAAAAGCTTAACCTACTTAATTAGTTGAGATCATGATTAGGCATATTAACTGACTAACGAAAAAGGCCAGTCCGTTAAGGCAGTTTGAGCATACATAAATTGCGAACAATAATTGTATTTAATGTACGAAATTGTCTTTAAAATATATGGATACCGAGAGAAGTGCAGAGGGTATAGGCTATAAATTACAAATCGAATGCAGACAACAAAGACAATTGTACACAAAGAAATAATTATGGCAAGCCGATATACATACATGATAAAACATCCATATAAATATATATAATAACTAATAATATTACGAGTAAAAAGCGATTTCAATAAAAATGAAAA 175 22293405 0.925795772 47 167 966 0.962264151 1.610660163 0.179245283 0.16 0.306603774 175 4 4 204 3L:22293047-22293427 6 Ten-m FBtr0078509 22293042 22295587 TGATCT 6mer3-8 dme-bantam-3p 3L - 22293285 22293485 3'utr Ten-m FlyBase G29611.1 AGATACCAAGCGGATGCCGTTGTCGAGCTCGACTGTGCTTCATCTCGTACATACCCCAGGTCCTCTGTTCTTAAAATACTTTGATCTGTACATTTTCAGGATGGGGCAAAAGCTTAACCTACTTAATTAGTTGAGATCATGATTAGGCATATTAACTGACTAACGAAAAAGGCCAGTCCGTTAAGGCAGTTTGAGCATACA 61 22293405 0.981324038 28 57 412 0.956043956 1.638489257 0.065934066 0.327868852 0.549450549 61 3 1 87 3L:22293285-22293485 6 22.5 2937 FBgn0004449 644.2766667 6.713333333 10.31666667 0.034922885 3.351539225 2.180936995 1 1 1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 22294462 22294468 - 3L_22294462_22294468_- 0.801965119 0.801934098 0.801949608 2.19E-05 Ten-m FBtr0306107|FBtr0306107|FBtr0306107|FBtr0330159|FBtr0330159|FBtr0330159|FBtr0078509|FBtr0078509|FBtr0078509 22293982|22293982|22293982|22293982|22293982|22293982|22293042|22293042|22293042 22295587|22295587|22295587|22295431|22295431|22295431|22295587|22295587|22295587 3L - 22294384 22295099 3'utr Ten-m FlyBase G39208.2 ACGGTGCGTATTATTTAGATTGGTCCATTAACCGATTTTGGTCGAGACAAGAGTGCATAGATCAAACCAATACGAACGGAATGATCTCGCTTGTTTCGGAAATTGGAGTTAGGACAAACACAGGCCAACAAGCCAGTTGCATTACGATGTCAAACGATGAGTATTACACAGCAAATTATGCATACGATAAGTACAGATGTTAAACTACGAAATGAATAAATGTAAAAAGATTAAAGTTCTGCATAGTAGCTCCCTAGTCTTTGGTCCAAACCTGGACTCTTTCCAACACAGCCCACTCTCAAATGGCAACAGAAATGTTGATCGCTGCTTAACCTACTTCTTCATAATTGCTCTGTGTATATACGAACGAATACTTTTCAAGCCTCCACTGACGAAAAAGCGCGTATCCTTTATCCTAACACTCATTTTAGCGAAATAGGTCTCTAAGCCGAATGCTCGAATTTAAATTTAATAGACGCGTCTACCTAATTTGGATAGCCAAGAATCAAAAGGAATTTTTATCAGTCCCCTTTCAATGCAATACAATACTCTAACGACTCTTTTCACTCATTTTATAATGTTAGCTGTTGAATTTATTCAAAGGAAAACGCATTAAAAACTTTTTACAAATTGTGATATATATTTCTAAACATTTCATTTGACAACTTGAAGTGTAGCGAAGAAAAACTCGAATTAACTCAAATCGAACCGAAAGT 1837 22294469 0.972993216 142 1734 16945 0.945722171 1.721958503 0.072217111 0.151333696 0.282888684 1837 80 38 2056 3L:22294384-22295099 7 Ten-m FBtr0078509|FBtr0078509|FBtr0078509|FBtr0330159|FBtr0330159|FBtr0330159|FBtr0306107|FBtr0306107|FBtr0306107 22293042|22293042|22293042|22293982|22293982|22293982|22293982|22293982|22293982 22295587|22295587|22295587|22295431|22295431|22295431|22295587|22295587|22295587 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 22294385 22294866 3'utr Ten-m FlyBase G29615.1 AAGTTCTGCATAGTAGCTCCCTAGTCTTTGGTCCAAACCTGGACTCTTTCCAACACAGCCCACTCTCAAATGGCAACAGAAATGTTGATCGCTGCTTAACCTACTTCTTCATAATTGCTCTGTGTATATACGAACGAATACTTTTCAAGCCTCCACTGACGAAAAAGCGCGTATCCTTTATCCTAACACTCATTTTAGCGAAATAGGTCTCTAAGCCGAATGCTCGAATTTAAATTTAATAGACGCGTCTACCTAATTTGGATAGCCAAGAATCAAAAGGAATTTTTATCAGTCCCCTTTCAATGCAATACAATACTCTAACGACTCTTTTCACTCATTTTATAATGTTAGCTGTTGAATTTATTCAAAGGAAAACGCATTAAAAACTTTTTACAAATTGTGATATATATTTCTAAACATTTCATTTGACAACTTGAAGTGTAGCGAAGAAAAACTCGAATTAACTCAAATCGAACCGAAAG 1034 22294469 0.971539297 102 973 9482 0.942743009 1.808640573 0.05792277 0.34622824 0.549933422 1034 65 21 1416 3L:22294385-22294866 7 817.5 2938 FBgn0004449 644.2766667 6.713333333 10.31666667 1.268864825 121.7725919 79.24071082 1 1 1 0.01 dme-miR-970-3p 7mer-m8 TCTTATG 3L 22295238 22295244 - 3L_22295238_22295244_- 0.658999343 0.658999343 0.658999343 0 Ten-m FBtr0306107|FBtr0330159|FBtr0078509 22293982|22293982|22293042 22295587|22295431|22295587 3L - 22295192 22295351 3'utr Ten-m FlyBase G39210.1 AAAAACAAAGGAAAAGCAAGCATTGAACACACTAATTAATATAAACTTTAATCATGCTTAAAGTTTAGTATTAGCCACAACGCAACCCTCGAATAACCGAAGAAACTTCTTATGTGTACACTGGAACAGAAATATGTATGTTGATGTTGAGTTTAGGCGT 113 22295245 0.979799473 20 80 548 0.73015873 1.185636577 0.23015873 0.097345133 0.19047619 113 29 5 92 3L:22295192-22295351 7 Ten-m FBtr0078509|FBtr0330159|FBtr0306107 22293042|22293982|22293982 22295587|22295431|22295587 TCTTATG 7mer-m8 dme-miR-970-3p 3L - 22295047 22295302 3'utr Ten-m FlyBase G29618.1 AATCATGCTTAAAGTTTAGTATTAGCCACAACGCAACCCTCGAATAACCGAAGAAACTTCTTATGTGTACACTGGAACAGAAATATGTATGTTGATGTTGAGTTTAGGCGTATGTTTAGTCCATGTGTGTAATGTTAAATGTAATTTTTTAAATCAGAATCAGTGTCCCCACGGGCAATCAGCTTGCAATGGCATTTTACGCCACGGTGCGTATTATTTAGATTGGTCCATTAACCGATTTTGGTCGAGACAAGAG 82 22295244 0.973551237 36 75 469 0.893442623 1.736396502 0.114754098 0.317073171 0.540983607 82 12 1 109 3L:22295047-22295302 7 39 2939 FBgn0004449 644.2766667 6.713333333 10.31666667 0.060533001 5.809334657 3.780290792 1 0 0.5 0.01 dme-miR-13b-2-5p 7mer-A1 TTGACGA 3L 22295445 22295451 - 3L_22295445_22295451_- 0.782911824 0.782891419 0.782901621 1.44E-05 Ten-m FBtr0306107|FBtr0078509 22293982|22293042 22295587|22295587 3L - 22295402 22295607 stop_codon Ten-m FlyBase G39211.1 TCGGCGAGCTGAGTGCGTGAGTGGAGGCATATAGAGAGAAGCTGGTGGCGGAGACGAAGCCAGAGGAGAGTGACATGACCGACGAAGAATACGGTGACCAGGAGGACTACCTAATTGCCGTGGGCAAAATGGAGCCAAGGGACAGCAGTGAGGCACTTGACGAGCAGATTTTGTAATTAGGTGAAATGCGCAACAGCGACCACAAG 157 22295459 0.912616298 27 153 495 0.968586387 2.267171728 0.298429319 0.159235669 0.308900524 157 6 0 185 3L:22295402-22295607 7 Ten-m FBtr0078509|FBtr0306107 22293042|22293982 22295587|22295587 TTGACGA 7mer-A1 dme-miR-13b-2-5p 3L - 22295406 22295604 stop_codon Ten-m FlyBase G29620.1 GCGAGCTGAGTGCGTGAGTGGAGGCATATAGAGAGAAGCTGGTGGCGGAGACGAAGCCAGAGGAGAGTGACATGACCGACGAAGAATACGGTGACCAGGAGGACTACCTAATTGCCGTGGGCAAAATGGAGCCAAGGGACAGCAGTGAGGCACTTGACGAGCAGATTTTGTAATTAGGTGAAATGCGCAACAGCGACCA 111 22295439 0.930338078 21 103 388 0.928571429 1.926856709 0.274725275 0.477477477 0.681318681 111 12 1 169 3L:22295406-22295604 7 56.5 2940 FBgn0004449 644.2766667 6.713333333 10.31666667 0.087695245 8.416087388 5.476575121 8 -12 -2 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3L 2235710 2235716 - 3L_2235710_2235716_- 0.661615511 0.66161549 0.6616155 0 CG9018 FBtr0072909 2235644 2235777 3L - 2235679 2235758 3'utr CG9018 FlyBase G33648.1 ATGGGATGTTGTTCGTCACTGCCTCTATTTTATGTTACCTAGTCTAGTCGTTTGTCGGCTATCCACATTTTGTATTAATA 42 2235743 0.842640139 10 38 410 0.927272727 1.40654018 0.272727273 0.238095238 0.418181818 42 3 1 51 3L:2235679-2235758 7 CG9018 FBtr0072909 2235644 2235777 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3L - 2235680 2235758 3'utr CG9018 FlyBase G25444.1 ATGGGATGTTGTTCGTCACTGCCTCTATTTTATGTTACCTAGTCTAGTCGTTTGTCGGCTATCCACATTTTGTATTAAT 43 2235714 0.991354666 15 38 403 0.910447761 1.785329835 0.313432836 0.418604651 0.626865672 43 6 0 61 3L:2235680-2235758 7 21 2941 FBgn0035318 237 21.22666667 32.59333333 0.088607595 0.989321608 0.644303539 27 -2 12.5 0.01 dme-miR-34-5p 7mer-m8 CACTGCC 3L 2235736 2235742 - 3L_2235736_2235742_- 0.708953382 0.708953382 0.708953382 0 CG9018 FBtr0072909 2235644 2235777 3L - 2235679 2235758 3'utr CG9018 FlyBase G33648.1 ATGGGATGTTGTTCGTCACTGCCTCTATTTTATGTTACCTAGTCTAGTCGTTTGTCGGCTATCCACATTTTGTATTAATA 42 2235743 0.842640139 10 38 410 0.927272727 1.40654018 0.272727273 0.238095238 0.418181818 42 3 1 51 3L:2235679-2235758 7 CG9018 FBtr0072909 2235644 2235777 CACTGCC 7mer-m8 dme-miR-34-5p 3L - 2235680 2235758 3'utr CG9018 FlyBase G25444.1 ATGGGATGTTGTTCGTCACTGCCTCTATTTTATGTTACCTAGTCTAGTCGTTTGTCGGCTATCCACATTTTGTATTAAT 43 2235714 0.991354666 15 38 403 0.910447761 1.785329835 0.313432836 0.418604651 0.626865672 43 6 0 61 3L:2235680-2235758 7 18 2942 FBgn0035318 237 21.22666667 32.59333333 0.075949367 0.84798995 0.552260176 1 -28 -13.5 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 225534 225541 + 3L_225534_225541_+ 0.500120318 0.500120318 0.500120318 0 CG33229 FBtr0072499|FBtr0345592 224756|224756 225605|225605 3L + 225444 225577 3'utr CG33229 FlyBase G26725.1 ACGGTTCATATTGAATCACTAGCGCTAGAAAACGGGCAATATTGCAAAGTAAACGAGTGAAAGTCGAAAACCCAACTATTAACTGTAAATGTACTTAAAGTAAGCATACAGAACTGATATTTGATAAAACCTAA 296 225533 0.975595691 19 279 1766 0.940860215 2.06694679 0.129032258 0.202702703 0.365591398 296 20 2 350 3L:225444-225577 8 CG33229 FBtr0345592|FBtr0072499 224756|224756 225605|225605 GTACTTAA 8mer-A1 dme-miR-252-5p 3L + 225446 225582 3'utr CG33229 FlyBase G20211.1 GGTTCATATTGAATCACTAGCGCTAGAAAACGGGCAATATTGCAAAGTAAACGAGTGAAAGTCGAAAACCCAACTATTAACTGTAAATGTACTTAAAGTAAGCATACAGAACTGATATTTGATAAAACCTAAAATAA 212 225533 0.973680409 18 201 1220 0.942073171 1.790988475 0.057926829 0.386792453 0.603658537 212 15 4 309 3L:225446-225582 8 110 2943 FBgn0053229 390.9566667 32.02 49 0.281361106 3.435352904 2.244897959 1 1 1 0.01 dme-miR-305-5p 8mer-A1 AGTACAAA 3L 2258697 2258704 + 3L_2258697_2258704_+ 0.605654138 0.605654138 0.605654138 0 CG2034 FBtr0072877|FBtr0332664 2258672|2258672 2258922|2258922 3L + 2258656 2258801 stop_codon CG2034 FlyBase G27270.1 GAGGATCTGTGCATCTAGGCTGCCCGCCAGCAGCGAACGGCAGTACAAATAGCCTTGGCTTTAAGTCTCCTTAAGTCTAACCTACTAAAACCATAAAATACCTGGAATTCCGGCCCCAAAGTTCCGCCTAGGGGTGTGTTCAACCT 99 2258710 0.817849275 16 98 561 0.98245614 2.049218023 0.157894737 0.131313131 0.245614035 99 2 0 112 3L:2258656-2258801 8 CG2034 FBtr0072877|FBtr0332664 2258672|2258672 2258922|2258922 AGTACAAA 8mer-A1 dme-miR-305-5p 3L + 2258683 2258734 3'utr CG2034 FlyBase G20642.1 CAGCAGCGAACGGCAGTACAAATAGCCTTGGCTTTAAGTCTCCTTAAGTCTA 34 2258710 0.968762948 4 33 216 0.963636364 1.72427587 0 0.441176471 0.654545455 34 2 0 53 3L:2258683-2258734 8 42 2944 FBgn0015359 300.1033333 32.34333333 49.50333333 0.139951794 1.298567453 0.848427715 -13 -13 -13 0.01 dme-miR-932-5p 6mer3-8 GGAATT 3L 2258759 2258764 + 3L_2258759_2258764_+ 1 0.997173358 0.998586679 0.001998708 CG2034 FBtr0072877|FBtr0332664 2258672|2258672 2258922|2258922 3L + 2258656 2258801 stop_codon CG2034 FlyBase G27270.1 GAGGATCTGTGCATCTAGGCTGCCCGCCAGCAGCGAACGGCAGTACAAATAGCCTTGGCTTTAAGTCTCCTTAAGTCTAACCTACTAAAACCATAAAATACCTGGAATTCCGGCCCCAAAGTTCCGCCTAGGGGTGTGTTCAACCT 99 2258763 0.817849275 16 98 561 0.98245614 2.049218023 0.157894737 0.131313131 0.245614035 99 2 0 112 3L:2258656-2258801 6 CG2034 FBtr0072877|FBtr0332664 2258672|2258672 2258922|2258922 GGAATT 6mer3-8 dme-miR-932-5p 3L + 2258741 2258791 3'utr CG2034 FlyBase G20642.2 TAAAACCATAAAATACCTGGAATTCCGGCCCCAAAGTTCCGCCTAGGGGTG 17 2258763 0.934242322 3 16 61 0.913043478 1.322219295 0.260869565 0.294117647 0.47826087 17 2 0 21 3L:2258741-2258791 6 24 2945 FBgn0015359 300.1033333 32.34333333 49.50333333 0.079972454 0.742038545 0.484815837 -4 -4 -4 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 2259195 2259201 - 3L_2259195_2259201_- 0.801953867 0.801968795 0.801961331 1.05E-05 oxt FBtr0072904|FBtr0072904|FBtr0072904 2258837|2258837|2258837 2259328|2259328|2259328 3L - 2259133 2259220 3'utr oxt FlyBase G33658.1 ATGTTTTCGTATAGATTGTTGTGATAATGTGAACTTTTAAGCGCCATTTTGACCGGAAGCGGAACTCCGCCGCTCCAATTGTATTTGA 61 2259204 0.98681453 15 56 527 0.927536232 1.329058719 0.31884058 0.098360656 0.202898551 61 3 2 64 3L:2259133-2259220 7 oxt FBtr0072904|FBtr0072904|FBtr0072904 2258837|2258837|2258837 2259328|2259328|2259328 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 2259151 2259223 3'utr oxt FlyBase G25452.1 TCGATGTTTTCGTATAGATTGTTGTGATAATGTGAACTTTTAAGCGCCATTTTGACCGGAAGCGGAACTCCGC 30 2259204 0.987907542 10 28 248 0.93877551 1.662757832 0.346938776 0.4 0.632653061 30 3 0 46 3L:2259151-2259223 7 30 2946 FBgn0015360 414.5533333 14.81333333 22.68333333 0.072367046 2.02520252 1.322556943 3 3 3 0.01 dme-miR-12-5p 7mer-m8 AATACTC 3L 2259281 2259287 - 3L_2259281_2259287_- 0.67451515 0.67451515 0.67451515 0 oxt FBtr0072904 2258837 2259328 3L - 2259255 2259296 3'utr oxt FlyBase G33659.1 TCTAGTGTAAATACTCGCCAAGATTTAGATGTCGAACCGCAA 10 2259285 0.966964605 2 10 57 1 1 0 0 0 10 0 0 10 3L:2259255-2259296 7 oxt FBtr0072904 2258837 2259328 AATACTC 7mer-m8 dme-miR-12-5p 3L - 2259248 2259295 3'utr oxt FlyBase G25453.1 CTAGTGTAAATACTCGCCAAGATTTAGATGTCGAACCGCAATTAACGA 16 2259285 0.958329289 2 15 73 1 1.380211242 0 0.25 0.5 16 0 0 24 3L:2259248-2259295 7 12.5 2947 FBgn0015360 414.5533333 14.81333333 22.68333333 0.030152936 0.843834383 0.551065393 -2 -2 -2 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 3L 22714513 22714519 - 3L_22714513_22714519_- 0.620204266 0.620204266 0.620204266 0 ArfGAP3 FBtr0330174|FBtr0330173|FBtr0330175|FBtr0078540|FBtr0078539|FBtr0113186|FBtr0331775 22714406|22714406|22714406|22714406|22714311|22714406|22714406 22714943|22714943|22714943|22714943|22714943|22714943|22714943 3L - 22714491 22714529 3'utr ArfGAP3 FlyBase G39308.1 AATTACAATTTGCATTTCGGCTGGGCAGCTTTTAATTTT 5 22714520 0.983505365 2 5 39 1 0.84509804 0.142857143 0.2 0.428571429 5 0 0 7 3L:22714491-22714529 7 ArfGAP3 FBtr0078540|FBtr0330175|FBtr0330173|FBtr0330174|FBtr0331775|FBtr0113186|FBtr0078539 22714406|22714406|22714406|22714406|22714406|22714406|22714311 22714943|22714943|22714943|22714943|22714943|22714943|22714943 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 22714488 22714536 3'utr ArfGAP3 FlyBase G29691.1 GTTTTGAAATTACAATTTGCATTTCGGCTGGGCAGCTTTTAATTTTTTC 6 22714519 0.963016922 4 6 57 1 0.954242509 0.111111111 0.333333333 0.555555556 6 0 0 9 3L:22714488-22714536 7 4.5 2948 FBgn0037182 511.4866667 25.40666667 39.02333333 0.008797883 0.177118866 0.115315623 1 0 0.5 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT 3L 22714838 22714843 - 3L_22714838_22714843_- 1 1 1 0 ArfGAP3 FBtr0330174|FBtr0330173|FBtr0330175|FBtr0078540|FBtr0078539|FBtr0113186|FBtr0331775 22714406|22714406|22714406|22714406|22714311|22714406|22714406 22714943|22714943|22714943|22714943|22714943|22714943|22714943 3L - 22714761 22714845 3'utr ArfGAP3 FlyBase G39310.1 TTAGCTGTCGCGATTATGCAGAAAGTTTTCAAGGACTCCAAGCCGATAGCCACGTAGTCTTGTTACAGAGGAGCAACCACTTCAC 15 22714832 0.769163456 8 14 86 0.941176471 1.204119983 0 0.133333333 0.235294118 15 1 0 16 3L:22714761-22714845 6 ArfGAP3 FBtr0078540|FBtr0330175|FBtr0330173|FBtr0330174|FBtr0331775|FBtr0113186|FBtr0078539 22714406|22714406|22714406|22714406|22714406|22714406|22714311 22714943|22714943|22714943|22714943|22714943|22714943|22714943 AGCTGT 6mer3-8 dme-miR-1008-3p 3L - 22714809 22714850 3'utr ArfGAP3 FlyBase G29692.1 ATATATTAGCTGTCGCGATTATGCAGAAAGTTTTCAAGGACT 7 22714832 0.72959095 2 5 49 0.666666667 0.77815125 0.222222222 0.285714286 0.444444444 7 3 0 6 3L:22714809-22714850 6 6.5 2949 FBgn0037182 511.4866667 25.40666667 39.02333333 0.012708054 0.255838363 0.166567011 -11 -11 -11 0.01 dme-miR-995-5p 7mer-A1 ATTCGGA 3L 22727375 22727381 - 3L_22727375_22727381_- 0.782911824 0.782911824 0.782911824 0 CG14450 FBtr0310503 22726232 22727477 3L - 22727328 22727396 3'utr CG14450 FlyBase G39328.1 CCTGTATGTGGAGGGATTCGGACTGAAGGTGACCACCAAGTTCTTTAAGAGTCTGCTTGCGCCGCCGAG 13 22727379 0.981958413 4 12 84 0.923076923 1.079181246 0.307692308 0 0 13 1 0 12 3L:22727328-22727396 7 CG14450 FBtr0310503 22726232 22727477 ATTCGGA 7mer-A1 dme-miR-995-5p 3L - 22727362 22727390 3'utr CG14450 FlyBase G29705.1 TGTGGAGGGATTCGGACTGAAGGTGACCA 5 22727380 0.721748275 3 4 19 0.875 0.84509804 0.625 0.4 0.625 5 1 0 7 3L:22727362-22727390 7 7.5 2950 FBgn0037184 120.6666667 9.83 15.03666667 0.062154696 0.762970498 0.498780758 -2 -1 -1.5 0.01 dme-miR-14-3p 7mer-m8 AAGACTG 3L 22733108 22733114 + 3L_22733108_22733114_+ 0.671795824 0.671795832 0.671795828 0 CG11367 FBtr0078528 22733038 22733446 3L + 22733081 22733139 3'utr CG11367 FlyBase G32385.1 CAAAGAGAATCTCCTGGACTTTAACAGAAGACTGCGTTTTTGCATTACCTAGTTCAAAC 15 22733101 0.696001017 8 14 104 0.947368421 1.255272505 0 0.266666667 0.421052632 15 1 0 18 3L:22733081-22733139 7 CG11367 FBtr0078528 22733038 22733446 AAGACTG 7mer-m8 dme-miR-14-3p 3L + 22733069 22733132 3'utr CG11367 FlyBase G24474.1 AGGACCCCCAGCCAAAGAGAATCTCCTGGACTTTAACAGAAGACTGCGTTTTTGCATTACCTAG 11 22733102 0.978526703 6 11 67 1 1.230448921 0.235294118 0.363636364 0.588235294 11 0 0 17 3L:22733069-22733132 7 7.5 2951 FBgn0037185 167.9933333 11.46666667 17.67 0.044644629 0.654069767 0.424448217 7 6 6.5 0.01 dme-miR-304-5p 6mer3-8 TGAGAT 3L 22733303 22733308 + 3L_22733303_22733308_+ 1 1 1 0 CG11367 FBtr0078528 22733038 22733446 3L + 22733285 22733327 3'utr CG11367 FlyBase G32386.1 ATTACTTCTAAGAATTCCTGAGATGTACATTTATAAATAAGTC 10 22733315 0.98247389 4 10 83 1 1 0 0 0 10 0 0 10 3L:22733285-22733327 6 CG11367 FBtr0078528 22733038 22733446 TGAGAT 6mer3-8 dme-miR-304-5p 3L + 22733294 22733321 3'utr CG11367 FlyBase G24475.1 AAGAATTCCTGAGATGTACATTTATAAA 5 22733315 0.675238928 4 5 39 1 0.954242509 0 0.6 0.777777778 5 0 0 9 3L:22733294-22733321 6 7 2952 FBgn0037185 167.9933333 11.46666667 17.67 0.04166832 0.610465116 0.396151669 -12 -12 -12 0.01 dme-miR-184-5p 6mer3-8 TGATAA 3L 22738872 22738877 - 3L_22738872_22738877_- 1 1 1 0 l(3)04053 FBtr0078535 22738600 22739100 3L - 22738869 22738912 3'utr l(3)04053 FlyBase G39329.1 ATGTGAGAATCAAAGCGCAAACTCGTGATGTTGGTTGATAAAGC 33 22738882 0.73907171 6 27 177 0.846153846 1.217483944 0.179487179 0.121212121 0.256410256 33 5 1 33 3L:22738869-22738912 6 l(3)04053 FBtr0078535 22738600 22739100 TGATAA 6mer3-8 dme-miR-184-5p 3L - 22738869 22738959 3'utr l(3)04053 FlyBase G29706.1 GTTGCATTGGGTTATATTTGGTGGGAAAATTAAGGGAGGGATGGGCAATGTGAGAATCAAAGCGCAAACTCGTGATGTTGGTTGATAAAGC 32 22738882 0.839916498 11 28 172 0.86 1.633468456 0.26 0.46875 0.66 32 7 0 43 3L:22738869-22738959 6 8.5 2953 FBgn0010830 273 13.44666667 20.59666667 0.031135531 0.632126921 0.412688137 5 5 5 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 22747952 22747958 + 3L_22747952_22747958_+ 0.66161564 0.661615372 0.661615506 1.41E-07 CG7369 FBtr0078530 22747716 22748614 3L + 22747938 22747969 3'utr CG7369 FlyBase G32401.1 ATTTCCGTTATCTTTGTGTTCCTGTTCCAAAT 77 22747951 0.707693543 6 76 831 0.99122807 2.053078443 0.105263158 0.38961039 0.587719298 77 1 0 113 3L:22747938-22747969 7 CG7369 FBtr0078530 22747716 22748614 TGTGTTC 7mer-m8 dme-miR-317-3p 3L + 22747938 22747972 3'utr CG7369 FlyBase G24485.1 ATTTCCGTTATCTTTGTGTTCCTGTTCCAAATTTG 62 22747951 0.707773385 6 61 674 1 1.995635195 0.181818182 0.435483871 0.646464646 62 0 0 99 3L:22747938-22747972 7 69 2954 FBgn0037188 267.3333333 8.483333333 12.97666667 0.258104738 8.133595285 5.317236065 1 1 1 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 22748070 22748077 + 3L_22748070_22748077_+ 0.500120318 0.500120318 0.500120318 0 CG7369 FBtr0078530 22747716 22748614 3L + 22748031 22748103 3'utr CG7369 FlyBase G32403.1 TTAATTAGACCATTGGGAGGATGGGAATAATGAAAGAATGTACTTAAGGCCGTACACGGCTAACAGCTAATGC 492 22748069 0.872856392 8 483 2403 0.984293194 2.751279104 0.139616056 0.16122449 0.282722513 490 9 0 564 3L:22748031-22748103 8 CG7369 FBtr0078530 22747716 22748614 GTACTTAA 8mer-A1 dme-miR-252-5p 3L + 22748037 22748100 3'utr CG7369 FlyBase G24486.1 AGACCATTGGGAGGATGGGAATAATGAAAGAATGTACTTAAGGCCGTACACGGCTAACAGCTAA 271 22748069 0.87474947 6 267 1316 0.995098039 2.608526034 0.137254902 0.357933579 0.573529412 271 2 0 406 3L:22748037-22748100 8 376 2955 FBgn0037188 267.3333333 8.483333333 12.97666667 1.406483791 44.32220039 28.97508348 1 1 1 0.01 dme-miR-8-3p 7mer-m8 CAGTATT 3L 22748217 22748223 + 3L_22748217_22748223_+ 0.661615243 0.661615243 0.661615243 0 CG7369 FBtr0078530 22747716 22748614 3L + 22748170 22748231 3'utr CG7369 FlyBase G32404.1 AAACCAATCTGACAAAGCTACATGAGTACGCGATATCCGTACGTGACCAGTATTTATATTTA 14 22748224 0.751754552 11 14 84 1 1.230448921 0.117647059 0.214285714 0.352941176 14 0 0 17 3L:22748170-22748231 7 CG7369 FBtr0078530 22747716 22748614 CAGTATT 7mer-m8 dme-miR-8-3p 3L + 22748185 22748227 3'utr CG7369 FlyBase G24487.1 AGCTACATGAGTACGCGATATCCGTACGTGACCAGTATTTATA 13 22748222 0.789043986 8 12 75 0.863636364 1.278753601 0 0.384615385 0.636363636 13 3 0 19 3L:22748185-22748227 7 9 2956 FBgn0037188 267.3333333 8.483333333 12.97666667 0.033665835 1.060903733 0.69355253 -7 -5 -6 0.01 dme-miR-282-5p 6mer2-7 GAGGCT 3L 22748323 22748328 + 3L_22748323_22748328_+ 1 1 1 0 CG7369 FBtr0078530 22747716 22748614 3L + 22748297 22748344 3'utr CG7369 FlyBase G32405.1 AACGGATTTCATTCTGATTCTGTCTCGAGGCTTTTTGCATCAGCAACA 41 22748329 0.706988239 6 41 396 1 1.716003344 0.096153846 0.243902439 0.403846154 41 0 0 52 3L:22748297-22748344 6 CG7369 FBtr0078530 22747716 22748614 GAGGCT 6mer2-7 dme-miR-282-5p 3L + 22748307 22748344 3'utr CG7369 FlyBase G24488.1 ATTCTGATTCTGTCTCGAGGCTTTTTGCATCAGCAACA 24 22748330 0.628369442 7 24 229 1 1.568201724 0.189189189 0.375 0.594594595 24 0 0 37 3L:22748307-22748344 6 32.5 2957 FBgn0037188 267.3333333 8.483333333 12.97666667 0.121571072 3.831041257 2.504495248 -6 -7 -6.5 0.01 dme-miR-283-5p 8mer-A1 TGATATTA 3L 22748527 22748534 + 3L_22748527_22748534_+ 0.592192292 0.592192292 0.592192292 0 CG7369 FBtr0078530 22747716 22748614 3L + 22748496 22748539 3'utr CG7369 FlyBase G32406.1 GATTTTGCAATATTGTGGATGAATTCATTATTGATATTAATTAT 7 22748525 0.989985562 5 7 69 1 0.84509804 0.142857143 0 0 7 0 0 7 3L:22748496-22748539 8 CG7369 FBtr0078530 22747716 22748614 TGATATTA 8mer-A1 dme-miR-283-5p 3L + 22748490 22748534 3'utr CG7369 FlyBase G24489.1 TTGCAAGATTTTGCAATATTGTGGATGAATTCATTATTGATATTA 6 22748523 0.993493826 4 5 62 0.833333333 0.698970004 0 0 0 6 1 0 5 3L:22748490-22748534 8 4.5 2958 FBgn0037188 267.3333333 8.483333333 12.97666667 0.016832918 0.530451866 0.346776265 2 4 3 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 3L 22784670 22784675 + 3L_22784670_22784675_+ 0.999933993 0.999999047 0.99996652 4.60E-05 SPoCk FBtr0306600|FBtr0078533|FBtr0113437|FBtr0078531|FBtr0078532|FBtr0332105|FBtr0302134 22784486|22784486|22784486|22784486|22784486|22784486|22784486 22785235|22787631|22785235|22785235|22785235|22785235|22785235 3L + 22784632 22784701 3'utr SPoCk FlyBase G32421.1 GAGCGACGGACCAAGGATGTGTGTGTTTAATTTTACATTTGACTTGACCAATTAAGAATGATTTAATTGT 19 22784684 0.982139242 10 18 135 0.961538462 1.397940009 0.076923077 0.368421053 0.538461538 19 1 0 25 3L:22784632-22784701 6 SPoCk FBtr0302134|FBtr0332105|FBtr0078532|FBtr0078531|FBtr0113437|FBtr0078533|FBtr0306600 22784486|22784486|22784486|22784486|22784486|22784486|22784486 22785235|22785235|22785235|22785235|22785235|22787631|22785235 TTGACT 6mer3-8 dme-miR-1012-3p 3L + 22784616 22784695 3'utr SPoCk FlyBase G24497.1 GAAAAGCCGAAAATAAGAGCGACGGACCAAGGATGTGTGTGTTTAATTTTACATTTGACTTGACCAATTAAGAATGATTT 10 22784676 0.976309438 6 9 59 0.85 1.230448921 0.3 0.5 0.75 10 3 0 17 3L:22784616-22784695 6 7.5 2959 FBgn0052451 1200.69 35.10333333 53.84666667 0.006246408 0.213654924 0.139284388 -14 -6 -10 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 22785085 22785091 + 3L_22785085_22785091_+ 0.754178804 0.754178804 0.754178804 0 SPoCk FBtr0306600|FBtr0306600|FBtr0306600|FBtr0113437|FBtr0113437|FBtr0113437|FBtr0078531|FBtr0078531|FBtr0078531|FBtr0078532|FBtr0078532|FBtr0078532|FBtr0332105|FBtr0332105|FBtr0332105|FBtr0302134|FBtr0302134|FBtr0302134 22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486 22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235 3L + 22784943 22785114 3'utr SPoCk FlyBase G32424.1 TACAATGGGCTGCAAAGCTTTTTTTATTTAACTTTTATTTTCATTTTATCTCTAAGTGCTTCTCTAGTTTCTAATGCTCACCGCGCAATTTGAGTCAATATGAAGTGTTTAATAATCTACAATGTCGGCAAAAACTGTTTAATGTGATATTATTTTAAGCACATAAACCAGA 198 22785081 0.991691345 22 184 2018 0.940677966 1.568201724 0.084745763 0.151515152 0.288135593 198 9 5 222 3L:22784943-22785114 7 SPoCk FBtr0302134|FBtr0302134|FBtr0302134|FBtr0332105|FBtr0332105|FBtr0332105|FBtr0078532|FBtr0078532|FBtr0078532|FBtr0078531|FBtr0078531|FBtr0078531|FBtr0113437|FBtr0113437|FBtr0113437|FBtr0306600|FBtr0306600|FBtr0306600 22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486 22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 22785056 22785115 3'utr SPoCk FlyBase G24498.2 AATCTACAATGTCGGCAAAAACTGTTTAATGTGATATTATTTTAAGCACATAAACCAGAT 107 22785081 0.719970686 11 96 1054 0.89261745 1.220761654 0.067114094 0.289719626 0.489932886 107 9 7 133 3L:22785056-22785115 7 135.5 2960 FBgn0052451 1200.69 35.10333333 53.84666667 0.112851777 3.860032286 2.516404606 4 4 4 0.01 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 22786246 22786253 + 3L_22786246_22786253_+ 0.668734347 0.668734347 0.668734347 0 SPoCk FBtr0078533 22784486 22787631 3L + 22786198 22786275 3'utr SPoCk FlyBase G32425.1 GCTCACTCTGTCCGTCCGTATGTCTATCCGTATAAATGTAGAAATCTTGGCAGCTATAAAAGCTAGAGGTTAGGCATG 32 22786245 0.981636243 7 27 200 0.828571429 0.985276743 0.228571429 0.09375 0.171428571 32 4 2 29 3L:22786198-22786275 8 SPoCk FBtr0078533 22784486 22787631 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L + 22786197 22786272 3'utr SPoCk FlyBase G24500.1 TGCTCACTCTGTCCGTCCGTATGTCTATCCGTATAAATGTAGAAATCTTGGCAGCTATAAAAGCTAGAGGTTAGGC 19 22786245 0.973504655 4 19 119 1 1.477121255 0.433333333 0.526315789 0.7 19 0 0 30 3L:22786197-22786272 8 24.5 2961 FBgn0052451 1200.69 35.10333333 53.84666667 0.020404934 0.697939417 0.454995667 1 1 1 0.01 dme-miR-283-5p 6mer2-7 GATATT 3L 22786502 22786507 + 3L_22786502_22786507_+ 1 1 1 0 SPoCk FBtr0078533 22784486 22787631 3L + 22786496 22786525 3'utr SPoCk FlyBase G32426.1 AGTCGAGATATTGGACTTTAGCGTTTTCAT 8 22786507 0.757560801 2 8 64 1 1.041392685 0.272727273 0.375 0.545454545 8 0 0 11 3L:22786496-22786525 6 SPoCk FBtr0078533 22784486 22787631 GATATT 6mer2-7 dme-miR-283-5p 3L + 22786483 22786520 3'utr SPoCk FlyBase G24501.1 AACGGGTATTTATAGTCGAGATATTGGACTTTAGCGTT 10 22786507 0.873061912 3 10 76 1 1.176091259 0.133333333 0.4 0.6 10 0 0 15 3L:22786483-22786520 6 9 2962 FBgn0052451 1200.69 35.10333333 53.84666667 0.00749569 0.256385908 0.167141265 -5 -5 -5 0.01 dme-miR-12-5p 7mer-A1 ATACTCA 3L 22790253 22790259 - 3L_22790253_22790259_- 0.823349562 0.823349562 0.823349562 0 jim FBtr0078582|FBtr0304985 22789231|22789231 22797911|22797911 3L - 22790212 22790310 3'utr jim FlyBase G39340.1 CGGAACAACACTAATCTCGGTCATTGCAAAATTGATTGCATAAAACAATGTATACTCAAGTCTTGGCAACTATTTAAAAAAAAATTCACGTTTAATTCC 23 22790262 0.974170267 7 23 141 1 1.431363764 0.148148148 0.173913043 0.296296296 23 0 0 27 3L:22790212-22790310 7 jim FBtr0304985|FBtr0078582 22789231|22789231 22797911|22797911 ATACTCA 7mer-A1 dme-miR-12-5p 3L - 22790214 22790268 3'utr jim FlyBase G29715.1 AAACAATGTATACTCAAGTCTTGGCAACTATTTAAAAAAAAATTCACGTTTAATT 11 22790247 0.976771395 5 11 70 1 1.230448921 0.058823529 0.454545455 0.647058824 11 0 0 17 3L:22790214-22790268 7 12.5 2963 FBgn0027339 2455.313333 43.04666667 66.12 0.005091 0.290382531 0.189050212 3 -12 -4.5 0.01 dme-miR-92b-3p 6mer2-7 TGCAAT 3L 22796092 22796097 - 3L_22796092_22796097_- 0.997453586 0.999910951 0.998682268 0.001737644 jim FBtr0078582|FBtr0333212|FBtr0100184|FBtr0330076|FBtr0333213|FBtr0333211|FBtr0304985 22789231|22795975|22795975|22795975|22795975|22795975|22789231 22797911|22797911|22797911|22797557|22797911|22797911|22797911 3L - 22796046 22796107 5'utr jim FlyBase G39342.1 AAGTTTCTAATGCAATCAAAGTAAGTGCTCCGAATACGGTTTGTTTTCACTGTTTTAAATTT 22 22796085 0.879169256 10 21 180 0.931034483 1.431363764 0.275862069 0.272727273 0.448275862 22 2 0 27 3L:22796046-22796107 6 jim FBtr0333211|FBtr0304985|FBtr0330076|FBtr0333213|FBtr0100184|FBtr0078582|FBtr0333212 22795975|22789231|22795975|22795975|22795975|22789231|22795975 22797911|22797911|22797557|22797911|22797911|22797911|22797911 TGCAAT 6mer2-7 dme-miR-92b-3p 3L - 22796010 22796107 5'utr jim FlyBase G29718.1 AAGTTTCTAATGCAATCAAAGTAAGTGCTCCGAATACGGTTTGTTTTCACTGTTTTAAATTTAAAGTTTATGAATTATGTTTGGATATTTTATTTAAA 14 22796068 0.985388586 11 12 115 0.909090909 1 0.045454545 0.5 0.681818182 14 1 1 20 3L:22796010-22796107 6 7 2964 FBgn0027339 2455.313333 43.04666667 66.12 0.00285096 0.162614217 0.105868119 -12 -29 -20.5 0.01 dme-miR-7-5p 7mer-m8 GTCTTCC 3L 22796627 22796633 - 3L_22796627_22796633_- 0.705950313 0.705950313 0.705950313 0 jim FBtr0078582|FBtr0333212|FBtr0100184|FBtr0330076|FBtr0333213|FBtr0333211|FBtr0304985 22789231|22795975|22795975|22795975|22795975|22795975|22789231 22797911|22797911|22797911|22797557|22797911|22797911|22797911 3L - 22796595 22796671 5'utr jim FlyBase G39345.1 ATGAAACCTTAAGTACATTGACTTAGGATTCATTTGTTGTCTTCCCCAACTAATTATGTGTAATTTATGTTGAGTTT 37 22796634 0.989463104 9 36 350 0.956521739 1.643452676 0.086956522 0.216216216 0.369565217 37 2 0 44 3L:22796595-22796671 7 jim FBtr0333211|FBtr0304985|FBtr0330076|FBtr0333213|FBtr0100184|FBtr0078582|FBtr0333212 22795975|22789231|22795975|22795975|22795975|22789231|22795975 22797911|22797911|22797557|22797911|22797911|22797911|22797911 GTCTTCC 7mer-m8 dme-miR-7-5p 3L - 22796618 22796664 5'utr jim FlyBase G29721.1 CTTAAGTACATTGACTTAGGATTCATTTGTTGTCTTCCCCAACTAAT 22 22796634 0.647549083 8 21 194 0.931034483 0.954242509 0.068965517 0.272727273 0.448275862 22 0 2 27 3L:22796618-22796664 7 22 2965 FBgn0027339 2455.313333 43.04666667 66.12 0.00896016 0.511073254 0.332728373 1 1 1 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3L 22796734 22796740 - 3L_22796734_22796740_- 0.440769994 0.443130967 0.441950481 0.001669479 jim FBtr0078582|FBtr0333212|FBtr0100184|FBtr0330076|FBtr0333213|FBtr0333211|FBtr0304985 22789231|22795975|22795975|22795975|22795975|22795975|22789231 22797911|22797911|22797911|22797557|22797911|22797911|22797911 3L - 22796683 22796834 5'utr jim FlyBase G39346.1 CATGGTTGATCGATTTACGCTTGGCTCAGCCAAGGGGATTAGCCAATGGGCCACCAAACTCTTATTAGAAATTTCTTTTTCATTTCAATTGATATGTGATTTTTAAAGTGTATAAATGAATACTGGAATGCAATTTAATGATACGATAAATC 71 22796734 0.99151843 21 64 687 0.89010989 1.607455023 0.10989011 0.225352113 0.395604396 71 9 1 81 3L:22796683-22796834 7 jim FBtr0333211|FBtr0304985|FBtr0330076|FBtr0333213|FBtr0100184|FBtr0078582|FBtr0333212 22795975|22789231|22795975|22795975|22795975|22789231|22795975 22797911|22797911|22797557|22797911|22797911|22797911|22797911 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 22796688 22796780 5'utr jim FlyBase G29722.1 CAAACTCTTATTAGAAATTTCTTTTTCATTTCAATTGATATGTGATTTTTAAAGTGTATAAATGAATACTGGAATGCAATTTAATGATACGAT 63 22796733 0.991663789 20 57 622 0.873563218 1.880813592 0.08045977 0.26984127 0.471264368 63 11 0 76 3L:22796688-22796780 7 45 2966 FBgn0027339 2455.313333 43.04666667 66.12 0.0183276 1.04537711 0.680580762 -6 -7 -6.5 0.01 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 22796997 22797004 - 3L_22796997_22797004_- 0.668734347 0.668734347 0.668734347 0 jim FBtr0078582|FBtr0333212|FBtr0100184|FBtr0330076|FBtr0333213|FBtr0333211|FBtr0304985 22789231|22795975|22795975|22795975|22795975|22795975|22789231 22797911|22797911|22797911|22797557|22797911|22797911|22797911 3L - 22796888 22797086 5'utr jim FlyBase G39347.1 AATTAATCGAGGATATACCACTTAGGCGTAATACTAGGATAGCTCCGATACAATGAGTATGAACATGTGACGTGATAGATAGGGCAGCTATTTGTGGCGAAGGCAGAAGGGGCAGAGCAAAAGGTTGATGGCAAAGAATAGGATGGGGAACGCAGACGTTGGCGCTGAGTAATTTGATTTTTGAAGCAGCATCAAAATT 194 22796995 0.956738101 29 175 1173 0.902542373 1.851258349 0.419491525 0.164948454 0.313559322 194 21 2 213 3L:22796888-22797086 8 jim FBtr0333211|FBtr0304985|FBtr0330076|FBtr0333213|FBtr0100184|FBtr0078582|FBtr0333212 22795975|22789231|22795975|22795975|22795975|22789231|22795975 22797911|22797911|22797557|22797911|22797911|22797911|22797911 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L - 22796917 22797090 5'utr jim FlyBase G29724.1 ATACAATTAATCGAGGATATACCACTTAGGCGTAATACTAGGATAGCTCCGATACAATGAGTATGAACATGTGACGTGATAGATAGGGCAGCTATTTGTGGCGAAGGCAGAAGGGGCAGAGCAAAAGGTTGATGGCAAAGAATAGGATGGGGAACGCAGACGTTGGCGCTGAGT 151 22797007 0.966308775 22 135 919 0.848360656 1.838849091 0.409836066 0.42384106 0.643442623 151 35 2 207 3L:22796917-22797090 8 132.5 2967 FBgn0027339 2455.313333 43.04666667 66.12 0.053964599 3.078054824 2.003932244 -9 3 -3 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3L 22797170 22797175 - 3L_22797170_22797175_- 1 1 1 0 jim FBtr0078582|FBtr0333212|FBtr0100184|FBtr0330076|FBtr0333213|FBtr0333211|FBtr0304985 22789231|22795975|22795975|22795975|22795975|22795975|22789231 22797911|22797911|22797911|22797557|22797911|22797911|22797911 3L - 22797155 22797278 5'utr jim FlyBase G39348.1 GGTCAATGTGTAAGAGAAGTAATGAGCAGAATGAAGGAGAGAAACGAGAGCCAAAACACAACGTTATACGATTTCTATTTGTTTTAGCACCCCAACAACTTTTAAGACTAAAAATACATCAAAT 31 22797177 0.999975171 11 27 131 0.861111111 1.491361694 0.25 0.161290323 0.277777778 31 5 0 31 3L:22797155-22797278 6 jim FBtr0333211|FBtr0304985|FBtr0330076|FBtr0333213|FBtr0100184|FBtr0078582|FBtr0333212 22795975|22789231|22795975|22795975|22795975|22789231|22795975 22797911|22797911|22797557|22797911|22797911|22797911|22797911 AAGACT 6mer3-8 dme-miR-14-3p 3L - 22797156 22797204 5'utr jim FlyBase G29725.1 CTATTTGTTTTAGCACCCCAACAACTTTTAAGACTAAAAATACATCAAA 15 22797176 0.549390533 4 13 77 0.823529412 1.146128036 0 0.133333333 0.235294118 15 3 0 14 3L:22797156-22797204 6 12.5 2968 FBgn0027339 2455.313333 43.04666667 66.12 0.005091 0.290382531 0.189050212 2 1 1.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3L 22797335 22797340 - 3L_22797335_22797340_- 1 1 1 0 jim FBtr0078582|FBtr0333212|FBtr0100184|FBtr0330076|FBtr0333213|FBtr0333211|FBtr0304985 22789231|22795975|22795975|22795975|22795975|22795975|22789231 22797911|22797911|22797911|22797557|22797911|22797911|22797911 3L - 22797317 22797361 5'utr jim FlyBase G39349.1 AGAACGCAAACAGGACGAGTACTAGTCTTTTTGAAAAGGACTCTA 89 22797334 0.980829206 7 84 602 0.954954955 1.247154615 0.072072072 0.202247191 0.36036036 89 0 5 106 3L:22797317-22797361 6 jim FBtr0333211|FBtr0304985|FBtr0330076|FBtr0333213|FBtr0100184|FBtr0078582|FBtr0333212 22795975|22789231|22795975|22795975|22795975|22789231|22795975 22797911|22797911|22797557|22797911|22797911|22797911|22797911 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3L - 22797320 22797362 5'utr jim FlyBase G29726.1 CAGAACGCAAACAGGACGAGTACTAGTCTTTTTGAAAAGGACT 70 22797334 0.979087952 8 67 459 0.944444444 2.008600172 0.037037037 0.371428571 0.592592593 70 6 0 102 3L:22797320-22797362 6 79.5 2969 FBgn0027339 2455.313333 43.04666667 66.12 0.03237876 1.846832895 1.202359347 -6 -6 -6 0.01 dme-bantam-3p 6mer2-7 GATCTC 3L 22797563 22797568 - 3L_22797563_22797568_- 0.999999886 1 0.999999943 7.07E-08 jim FBtr0078582|FBtr0333212|FBtr0100184|FBtr0333213|FBtr0333211|FBtr0304985 22789231|22795975|22795975|22795975|22795975|22789231 22797911|22797911|22797911|22797911|22797911|22797911 3L - 22797366 22797611 stop_codon jim FlyBase G39350.1 TCACACGCGATTCCCATTCATCCACACATACACTCGATATTCGGATCTCTATGATGTCATCAGTAGGAGAGACAGGAGCCGGAGGCAGGAATTCAAAGTTAATAAACACAAACTATTCACCATACTTCATAGGTTCGATTAGTTCTTTAGTATTAGACGCAAAACAAATTCTCCTAGTTTTTAAAACTAATCTTAAAATCACAAAACACAGTTTGGTAATGGCAAACGAACGAACCGAGAGGAGCT 115 22797561 0.983779384 27 105 819 0.925925926 1.619788758 0.192592593 0.147826087 0.274074074 115 8 2 125 3L:22797366-22797611 6 jim FBtr0333211|FBtr0304985|FBtr0333213|FBtr0100184|FBtr0078582|FBtr0333212 22795975|22789231|22795975|22795975|22789231|22795975 22797911|22797911|22797911|22797911|22797911|22797911 GATCTC 6mer2-7 dme-bantam-3p 3L - 22797416 22797598 stop_codon jim FlyBase G29727.1 CCATTCATCCACACATACACTCGATATTCGGATCTCTATGATGTCATCAGTAGGAGAGACAGGAGCCGGAGGCAGGAATTCAAAGTTAATAAACACAAACTATTCACCATACTTCATAGGTTCGATTAGTTCTTTAGTATTAGACGCAAAACAAATTCTCCTAGTTTTTAAAACTAATCTTAA 81 22797561 0.970681368 19 75 596 0.918699187 2.053078443 0.276422764 0.419753086 0.617886179 81 10 0 113 3L:22797416-22797598 6 52.5 2970 FBgn0027339 2455.313333 43.04666667 66.12 0.0213822 1.219606628 0.794010889 -7 -7 -7 0.01 dme-miR-932-5p 6mer2-7 GAATTG 3L 22868808 22868813 - 3L_22868808_22868813_- 0.999194674 1 0.999597337 0.000569433 Arf79F FBtr0078571|FBtr0078574|FBtr0299906|FBtr0078575|FBtr0299907|FBtr0112858|FBtr0332054|FBtr0078573 22868506|22868506|22868378|22868506|22868506|22868506|22868506|22868506 22869081|22869081|22869081|22869081|22869081|22869081|22869081|22869081 3L - 22868812 22868897 3'utr Arf79F FlyBase G39366.1 CAACAACAAGAGCAGCAGATCTTCGCATAACTTAAAGGGCTCCGCATGTCCGTATTTCCAAACAAGAAACTGAAATTGTTTATTGA 14 22868822 0.96845559 7 13 77 0.9375 0.875061263 0 0.142857143 0.25 14 0 1 15 3L:22868812-22868897 1 Arf79F FBtr0332054|FBtr0078573|FBtr0299907|FBtr0112858|FBtr0299906|FBtr0078575|FBtr0078571|FBtr0078574 22868506|22868506|22868506|22868506|22868378|22868506|22868506|22868506 22869081|22869081|22869081|22869081|22869081|22869081|22869081|22869081 GAATTG 6mer2-7 dme-miR-932-5p 3L - 22868809 22868890 3'utr Arf79F FlyBase G29744.1 AAGAGCAGCAGATCTTCGCATAACTTAAAGGGCTCCGCATGTCCGTATTTCCAAACAAGAAACTGAAATTGTTTATTGAATT 12 22868822 0.977574206 8 10 80 0.833333333 1.176091259 0.166666667 0.416666667 0.611111111 12 3 0 15 3L:22868809-22868890 4 1.5 2971 FBgn0010348 8989.26 775.5233333 1192.656667 0.000166866 0.001934178 0.001257696 9 9 9 0.01 dme-miR-8-3p 7mer-A1 AGTATTA 3L 22905391 22905397 + 3L_22905391_22905397_+ 0.823349562 0.823349562 0.823349562 0 BoYb FBtr0078559 22905182 22905470 3L + 22905369 22905405 3'utr BoYb FlyBase G32463.1 TAGAAAAAATCGTGTGCTCTTGAGTATTAAAACCTGT 11 22905389 0.733891611 3 10 89 0.933333333 1.146128036 0.066666667 0.272727273 0.466666667 11 1 0 14 3L:22905369-22905405 7 BoYb FBtr0078559 22905182 22905470 AGTATTA 7mer-A1 dme-miR-8-3p 3L + 22905367 22905401 3'utr BoYb FlyBase G24523.1 ACTAGAAAAAATCGTGTGCTCTTGAGTATTAAAAC 6 22905388 0.974411496 3 6 39 1 1 0 0.666666667 0.8 6 0 0 10 3L:22905367-22905401 7 8 2972 FBgn0037205 488.74 16.67 25.54666667 0.016368621 0.479904019 0.313152401 2 3 2.5 0.01 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 22914478 22914484 + 3L_22914478_22914484_+ 0.823349562 0.823349562 0.823349562 0 CG12768 FBtr0331397|FBtr0331396 22914244|22914244 22914758|22914758 3L + 22914453 22914504 3'utr CG12768 FlyBase G32470.1 AAATAATTTTTTGACTTCGCCTACTGCAGCTATATTATAAAGTCGTCCGATT 12 22914477 0.793827541 5 12 102 1 1.113943352 0 0.083333333 0.153846154 12 0 0 13 3L:22914453-22914504 7 CG12768 FBtr0331396|FBtr0331397 22914244|22914244 22914758|22914758 GCAGCTA 7mer-A1 dme-miR-980-3p 3L + 22914462 22914490 3'utr CG12768 FlyBase G24530.1 TTTGACTTCGCCTACTGCAGCTATATTAT 11 22914475 0.703517005 5 10 74 0.928571429 1.113943352 0.142857143 0.181818182 0.357142857 11 1 0 13 3L:22914462-22914490 7 11 2973 FBgn0037206 334.1233333 20.85 31.84666667 0.032921975 0.527577938 0.345405066 1 3 2 0.01 dme-miR-263a-5p 8mer-A1 GTGCCATA 3L 22951555 22951562 + 3L_22951555_22951562_+ 0.62891525 0.628914722 0.628914986 3.54E-07 Mes2 FBtr0078561|FBtr0078563 22951389|22951389 22952248|22952248 3L + 22951204 22951589 stop_codon Mes2 FlyBase G32487.1 GGGCGTCGCAAGCGGAGGGTTGGATCTGCCGCCCCCACAAACTGTACGTGAGGTTTTGAACTCCAAGTTCTGCGGCTTTATTTCAGCCAAGCTAAACAGCATGGAGGACTCGGACGCGGACAATTTAATGAATCGCATTCTTCTCTTACTGGTTCAAGTGCAGCAGTGCGAAGGGTCCACGAAATAGACAGCGGAGGAGAAGAGCGCTAAGTGTACGGGTGTAATTATAGTAGCCAAAAAAAAGTACATAATGGAATGATGTTGCTGCTCAGAGCACTTATAACTGAATTTTCTTGCCATTATATATTACTTTCCTAAAGAAATACAAATTTACTTGCCAATGCCAAATCTGTGCCATACCAAAAGGATCAATCAAATATGAATGA 970 22951554 0.999995003 64 933 5859 0.966192171 2.190731785 0.072064057 0.135051546 0.253558719 970 32 6 1086 3L:22951204-22951589 8 Mes2 FBtr0078561|FBtr0078563 22951389|22951389 22952248|22952248 GTGCCATA 8mer-A1 dme-miR-263a-5p 3L + 22951332 22951588 stop_codon Mes2 FlyBase G24549.1 TGAATCGCATTCTTCTCTTACTGGTTCAAGTGCAGCAGTGCGAAGGGTCCACGAAATAGACAGCGGAGGAGAAGAGCGCTAAGTGTACGGGTGTAATTATAGTAGCCAAAAAAAAGTACATAATGGAATGATGTTGCTGCTCAGAGCACTTATAACTGAATTTTCTTGCCATTATATATTACTTTCCTAAAGAAATACAAATTTACTTGCCAATGCCAAATCTGTGCCATACCAAAAGGATCAATCAAATATGAATG 652 22951554 0.969292382 43 621 3926 0.952565344 2.390935107 0.065827686 0.377300613 0.60696999 652 46 3 984 3L:22951332-22951588 8 531 2974 FBgn0037207 3401.653333 185.0666667 283.5166667 0.156100563 2.869236311 1.872905767 1 1 1 0.01 dme-miR-79-3p 7mer-A1 AGCTTTA 3L 22951968 22951974 + 3L_22951968_22951974_+ 0.823349562 0.823349562 0.823349562 0 Mes2 FBtr0078561|FBtr0078563 22951389|22951389 22952248|22952248 3L + 22951892 22952067 3'utr Mes2 FlyBase G32488.1 AAAAAGCGAGCATATTACTCATAGTTTCATATACAGCGATATGAATATTAACAATATCTGAACACTAAATGAGAACAGCTTTAACAATTTGTCGTTTTTGAATAAAACACCATCTTTGGCAGTAATGCTTTGCTATCGATGTACGCAGACAATGTTTTGGCCATTCAGCCCAATTT 46 22951961 0.922966987 25 43 358 0.936170213 1.643452676 0.191489362 0.02173913 0.042553191 46 3 0 44 3L:22951892-22952067 7 Mes2 FBtr0078561|FBtr0078563 22951389|22951389 22952248|22952248 AGCTTTA 7mer-A1 dme-miR-79-3p 3L + 22951843 22952013 3'utr Mes2 FlyBase G24552.1 CTTGTTAAGTTGAAAACGTAGAAATTAGAAAAGAAAAGTTTTTAACTTAAAAAAGCGAGCATATTACTCATAGTTTCATATACAGCGATATGAATATTAACAATATCTGAACACTAAATGAGAACAGCTTTAACAATTTGTCGTTTTTGAATAAAACACCATCTTTGGCAG 34 22951980 0.983481742 16 30 237 0.914893617 1.633468456 0.191489362 0.294117647 0.489361702 34 4 0 43 3L:22951843-22952013 7 7 2975 FBgn0037207 3401.653333 185.0666667 283.5166667 0.002057823 0.037824207 0.024689907 7 -12 -2.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 22952122 22952127 + 3L_22952122_22952127_+ 0.701858996 0.999624143 0.850741569 0.210551721 Mes2 FBtr0078561|FBtr0078563 22951389|22951389 22952248|22952248 3L + 22952090 22952135 3'utr Mes2 FlyBase G32489.1 TTTCCGTTTTTCGGTGGATATTGAGTAATAAAGTACCTTTAAATAT 8 22952129 0.638003695 5 8 57 1 0.954242509 0 0.125 0.222222222 8 0 0 9 3L:22952090-22952135 6 Mes2 FBtr0078561|FBtr0078563 22951389|22951389 22952248|22952248 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 22952063 22952182 3'utr Mes2 FlyBase G24553.1 AATTTAAATCAAAAATTTTGAAAAAGTTTTCCGTTTTTCGGTGGATATTGAGTAATAAAGTACCTTTAAATATAAAAAAATCAAACGTGTCTACCGAACATGAACATAATCAGCCGATTT 24 22952129 0.985394676 12 21 176 0.914285714 1.505149978 0.114285714 0.416666667 0.6 24 3 0 32 3L:22952063-22952182 6 9 2976 FBgn0037207 3401.653333 185.0666667 283.5166667 0.002645772 0.048631124 0.031744166 -7 -7 -7 0.01 dme-miR-988-3p 7mer-A1 CAAGGGA 3L 23318907 23318913 - 3L_23318907_23318913_- 0.782911824 0.782911824 0.782911824 0 alpha-Cat FBtr0339894 23318644 23329837 3L - 23318893 23318943 3'utr alpha-Cat FlyBase G39447.2 AAAACCAGAAGAAGTACGGGCCAAAGTTCGCAAGGGATCTCAAAAAAAGGT 31 23318917 0.942441584 3 26 88 0.891891892 1.217483944 0.216216216 0.193548387 0.324324324 31 3 1 33 3L:23318893-23318943 7 alpha-Cat FBtr0339894 23318644 23329837 CAAGGGA 7mer-A1 dme-miR-988-3p 3L - 23318893 23318964 3'utr alpha-Cat FlyBase G29804.1 AAAACCATTGGTCAGGCCTGAAAAACCAGAAGAAGTACGGGCCAAAGTTCGCAAGGGATCTCAAAAAAAGGT 27 23318917 0.759385332 7 25 88 0.930232558 1.602059991 0.209302326 0.481481481 0.674418605 27 3 0 40 3L:23318893-23318964 7 24.5 2977 FBgn0010215 3733.256667 144.9433333 221.23 0.006562635 0.169031576 0.110744474 4 4 4 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 23328751 23328756 - 3L_23328751_23328756_- 1 1 1 0 alpha-Cat FBtr0339894 23318644 23329837 3L - 23328725 23328782 5'utr alpha-Cat FlyBase G39456.1 TGGATAATTATGAACCATGTATTTACACCAAACGAGTCTTAGAAGCAGTCAAAGTTCT 9 23328760 0.961543715 5 9 50 1 1 0.1 0.111111111 0.2 9 0 0 10 3L:23328725-23328782 6 alpha-Cat FBtr0339894 23318644 23329837 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 23328717 23328773 5'utr alpha-Cat FlyBase G29808.1 ATGAACCATGTATTTACACCAAACGAGTCTTAGAAGCAGTCAAAGTTCTACGAGATC 7 23328759 0.93692024 4 7 29 1 1.146128036 0.214285714 0.428571429 0.714285714 7 0 0 14 3L:23328717-23328773 6 7 2978 FBgn0010215 3733.256667 144.9433333 221.23 0.001875039 0.048294736 0.031641278 4 3 3.5 0.01 dme-miR-8-3p 6mer3-8 CAGTAT 3L 23328918 23328923 - 3L_23328918_23328923_- 1 1 1 0 alpha-Cat FBtr0339894 23318644 23329837 3L - 23328896 23328964 5'utr alpha-Cat FlyBase G39458.1 CGAGGCAGTGGATGATATTACAACAATTGACGACTTTTTAGCAGTATCTGAGAATCACATTCTTGAAGA 29 23328928 0.96039115 8 27 219 0.972222222 1.544068044 0.055555556 0.172413793 0.333333333 29 1 0 35 3L:23328896-23328964 6 alpha-Cat FBtr0339894 23318644 23329837 CAGTAT 6mer3-8 dme-miR-8-3p 3L - 23328892 23328948 5'utr alpha-Cat FlyBase G29810.1 ATTACAACAATTGACGACTTTTTAGCAGTATCTGAGAATCACATTCTTGAAGATGTA 13 23328927 0.982071212 6 12 97 1 1.230448921 0 0.230769231 0.411764706 13 0 0 17 3L:23328892-23328948 6 16.5 2979 FBgn0010215 3733.256667 144.9433333 221.23 0.004419734 0.113837592 0.074583013 5 4 4.5 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 3L 23329045 23329050 - 3L_23329045_23329050_- 0.999999334 1 0.999999667 4.95E-07 alpha-Cat FBtr0339894 23318644 23329837 3L - 23328997 23329069 5'utr alpha-Cat FlyBase G39459.1 AATAAATGCAGCATCGATATTGACTGTTAGACCGAATTCAAAAGTAGCTCAAGAAAATATGACTACTTATCGA 173 23329043 0.975078345 8 172 1076 0.995614035 2.054995862 0.210526316 0.25433526 0.434210526 173 0 1 227 3L:23328997-23329069 6 alpha-Cat FBtr0339894 23318644 23329837 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 23329017 23329067 5'utr alpha-Cat FlyBase G29811.1 TAAATGCAGCATCGATATTGACTGTTAGACCGAATTCAAAAGTAGCTCAAG 87 23329043 0.970834668 6 87 541 1 2.117271296 0.145038168 0.413793103 0.610687023 87 0 0 131 3L:23329017-23329067 6 127 2980 FBgn0010215 3733.256667 144.9433333 221.23 0.034018556 0.876204494 0.574063192 -7 -7 -7 0.01 dme-miR-307a-3p 6mer2-7 GTTGTG 3L 23329300 23329305 - 3L_23329300_23329305_- 1 1 1 0 alpha-Cat FBtr0339894 23318644 23329837 3L - 23329258 23329381 5'utr alpha-Cat FlyBase G39462.1 CAGCCCAGGACTCTCTCGAGCGATTGATCAAATGTGTCGAAAGACTCGCGACCTAAGAAGGCAATTGCGAAAGGCTGTTGTGGATCATGTTTCGGACTCTTTTTTGGAGACTACAACTCCTTTG 15 23329317 0.983662649 9 14 112 0.875 1.146128036 0.125 0.066666667 0.125 15 2 0 14 3L:23329258-23329381 6 alpha-Cat FBtr0339894 23318644 23329837 GTTGTG 6mer2-7 dme-miR-307a-3p 3L - 23329256 23329391 5'utr alpha-Cat FlyBase G29812.1 AAAAAGATAACAGCCCAGGACTCTCTCGAGCGATTGATCAAATGTGTCGAAAGACTCGCGACCTAAGAAGGCAATTGCGAAAGGCTGTTGTGGATCATGTTTCGGACTCTTTTTTGGAGACTACAACTCCTTTGCT 11 23329316 0.964560654 11 11 60 1 1.146128036 0.071428571 0.181818182 0.357142857 11 0 0 14 3L:23329256-23329391 6 5 2981 FBgn0010215 3733.256667 144.9433333 221.23 0.001339313 0.03449624 0.022600913 12 11 11.5 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 3L 234028 234034 - 3L_234028_234034_- 0.782911824 0.782911824 0.782911824 0 E(bx) FBtr0332101|FBtr0332103|FBtr0301348|FBtr0072522|FBtr0332102|FBtr0332104|FBtr0072521 233924|233924|233924|233924|233924|233924|233924 236879|234298|234298|234298|234298|234298|234298 3L - 233951 234112 3'utr E(bx) FlyBase G32851.1 AACGTACACCAGTATGCAATAAATTTCATATTCACCAGACATTTGTAAGATTAAAAATAATTAAGTAAAACCCCCTTTGTACAAAACATTAAAGTGTAAATAAACAGCATGCATTTCATTTGATATCCTTATCATATGCTGTAGGTTTAAACTTAGGCGTAT 118 234036 0.940288501 20 113 826 0.957746479 1.531478917 0.035211268 0.169491525 0.309859155 118 3 3 136 3L:233951-234112 7 E(bx) FBtr0072521|FBtr0332104|FBtr0332102|FBtr0072522|FBtr0301348|FBtr0332103|FBtr0332101 233924|233924|233924|233924|233924|233924|233924 234298|234298|234298|234298|234298|234298|236879 GTACAAA 7mer-A1 dme-miR-305-5p 3L - 233965 234094 3'utr E(bx) FlyBase G24839.1 ATAAATTTCATATTCACCAGACATTTGTAAGATTAAAAATAATTAAGTAAAACCCCCTTTGTACAAAACATTAAAGTGTAAATAAACAGCATGCATTTCATTTGATATCCTTATCATATGCTGTAGGTTT 88 234036 0.756104698 16 81 580 0.9375 1.477121255 0.0234375 0.329545455 0.5390625 88 5 3 120 3L:233965-234094 7 60 2982 FBgn0000541 5641.79 79.62333333 122.1466667 0.010634923 0.753547955 0.49121275 2 2 2 0.01 dme-miR-980-5p 7mer-m8 GAAAAAC 3L 234226 234232 - 3L_234226_234232_- 0.705949576 0.705949576 0.705949576 0 E(bx) FBtr0332101|FBtr0332103|FBtr0301348|FBtr0072522|FBtr0332102|FBtr0332104|FBtr0072521 233924|233924|233924|233924|233924|233924|233924 236879|234298|234298|234298|234298|234298|234298 3L - 234201 234321 stop_codon E(bx) FlyBase G32852.1 ATGTTTTTGACCAAAGAACATAAGAAATAATAGCCCTTGAAAACTTTAGAACAAATGATTATAGTTTATAAAGACACTTCTAACAATTTGAAAAACGTCCTTCAGTTATGTATTCTTATTT 98 234221 0.978844029 15 90 614 0.924369748 2.041392685 0.042016807 0.173469388 0.319327731 98 9 0 110 3L:234201-234321 7 E(bx) FBtr0072521|FBtr0332104|FBtr0332102|FBtr0072522|FBtr0301348|FBtr0332103|FBtr0332101 233924|233924|233924|233924|233924|233924|233924 234298|234298|234298|234298|234298|234298|236879 GAAAAAC 7mer-m8 dme-miR-980-5p 3L - 234205 234246 3'utr E(bx) FlyBase G24840.1 ACTTCTAACAATTTGAAAAACGTCCTTCAGTTATGTATTCTT 33 234221 0.768406923 4 33 225 1 1.612783857 0 0.212121212 0.365853659 33 0 0 41 3L:234205-234246 7 41 2983 FBgn0000541 5641.79 79.62333333 122.1466667 0.007267197 0.514924436 0.335662046 -11 -11 -11 0.01 dme-miR-1008-3p 7mer-A1 GCTGTGA 3L 235160 235166 - 3L_235160_235166_- 0.823312044 0.82334908 0.823330562 2.62E-05 E(bx) FBtr0332101 233924 236879 3L - 235106 235189 3'utr E(bx) FlyBase G32856.1 CGACGAGTCACAATTTTATATATGCTGTGATAAATGCCAGGATTGGTTTCATGGCCGTTGCGTTGGAATACTTCAGAGCGAAGC 107 235167 0.732358486 14 95 945 0.888888889 1.572096768 0.023809524 0.177570093 0.301587302 107 12 2 112 3L:235106-235189 7 E(bx) FBtr0332101 233924 236879 GCTGTGA 7mer-A1 dme-miR-1008-3p 3L - 235100 235190 3'utr E(bx) FlyBase G24845.1 ACGACGAGTCACAATTTTATATATGCTGTGATAAATGCCAGGATTGGTTTCATGGCCGTTGCGTTGGAATACTTCAGAGCGAAGCAGAGTT 82 235167 0.990608586 14 71 733 0.846153846 1.439332694 0.053846154 0.426829268 0.638461538 82 17 3 110 3L:235100-235190 7 84 2984 FBgn0000541 5641.79 79.62333333 122.1466667 0.014888892 1.054967137 0.68769785 1 1 1 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT 3L 235201 235206 - 3L_235201_235206_- 1 1 1 0 E(bx) FBtr0332101 233924 236879 3L - 235191 235217 3'utr E(bx) FlyBase G32857.1 AGCTTTACTGTAGCTGTCGTCAACCAT 5 235213 0.764084844 3 4 31 0.833333333 0.698970004 0.166666667 0.2 0.333333333 5 1 0 5 3L:235191-235217 6 E(bx) FBtr0332101 233924 236879 AGCTGT 6mer3-8 dme-miR-1008-3p 3L - 235192 235223 3'utr E(bx) FlyBase G24846.1 CGCAACAGCTTTACTGTAGCTGTCGTCAACCA 5 235212 0.783869917 4 5 32 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3L:235192-235223 6 5 2985 FBgn0000541 5641.79 79.62333333 122.1466667 0.000886244 0.062795663 0.040934396 7 6 6.5 0.01 dme-miR-277-3p 6mer3-8 TGCATT 3L 235246 235251 - 3L_235246_235251_- 1 1 1 0 E(bx) FBtr0332101 233924 236879 3L - 235222 235253 3'utr E(bx) FlyBase G32858.1 TTTGCATTGATTGCAAGAGGGCGAGAGAAACG 7 235244 0.961445126 4 6 32 0.777777778 0.84509804 0 0.285714286 0.444444444 7 2 0 7 3L:235222-235253 6 E(bx) FBtr0332101 233924 236879 TGCATT 6mer3-8 dme-miR-277-3p 3L - 235226 235259 3'utr E(bx) FlyBase G24847.1 AGTTCATTTGCATTGATTGCAAGAGGGCGAGAGA 5 235244 0.983923368 2 4 31 0.625 0.698970004 0.125 0.4 0.625 5 3 0 5 3L:235226-235259 6 6 2986 FBgn0000541 5641.79 79.62333333 122.1466667 0.001063492 0.075354795 0.049121275 -7 -7 -7 0.01 dme-miR-8-3p 8mer-A1 CAGTATTA 3L 235287 235294 - 3L_235287_235294_- 0.671698124 0.671698124 0.671698124 0 E(bx) FBtr0332101 233924 236879 3L - 235257 235315 3'utr E(bx) FlyBase G32859.1 TTGGTTCCATGGGGATTGTGTCAGTATTACCGAGGAAGCTTCTAAAAAACTATCGGAGT 76 235295 0.983374433 8 72 541 0.941860465 1.908485019 0.546511628 0.105263158 0.209302326 76 5 0 81 3L:235257-235315 8 E(bx) FBtr0332101 233924 236879 CAGTATTA 8mer-A1 dme-miR-8-3p 3L - 235271 235340 3'utr E(bx) FlyBase G24848.1 ACGTGGGGTGCGACTTGTGCAGCAATTGGTTCCATGGGGATTGTGTCAGTATTACCGAGGAAGCTTCTAA 46 235295 0.708453638 9 40 329 0.811594203 1.146128036 0.608695652 0.391304348 0.594202899 46 10 3 56 3L:235271-235340 8 56.5 2987 FBgn0000541 5641.79 79.62333333 122.1466667 0.010014552 0.709590991 0.462558673 1 1 1 0.01 dme-miR-79-3p 8mer-A1 TAGCTTTA 3L 2367921 2367928 - 3L_2367921_2367928_- 0.625364009 0.625328868 0.625346439 2.48E-05 CG1317 FBtr0345587 2367841 2368638 3L - 2367910 2367944 3'utr CG1317 FlyBase G33670.1 ATGAACATTTTCGAGTTAGCTTTACGAACTGTAAA 24 2367929 0.799773147 2 23 191 0.964285714 1.130333768 0.035714286 0.166666667 0.285714286 24 0 1 27 3L:2367910-2367944 8 CG1317 FBtr0345587 2367841 2368638 TAGCTTTA 8mer-A1 dme-miR-79-3p 3L - 2367902 2367980 3'utr CG1317 FlyBase G25462.1 AAGTGGTGAAAAATGAATGGATAGTGGAATAGAAAAATGAACATTTTCGAGTTAGCTTTACGAACTGTAAAAATTACAT 14 2367929 0.980145012 5 14 101 1 1.361727836 0.217391304 0.5 0.695652174 14 0 0 23 3L:2367902-2367980 8 17.5 2988 FBgn0035333 712.6366667 22.14333333 33.55333333 0.024556693 0.790305585 0.521557719 1 1 1 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 3L 2368137 2368142 - 3L_2368137_2368142_- 0.999438294 0.999994416 0.999716355 0.000393222 CG1317 FBtr0072901|FBtr0300773|FBtr0345587 2368012|2368012|2367841 2368638|2368638|2368638 3L - 2368067 2368154 3'utr CG1317 FlyBase G33671.2 TTGTATGATATTTTGACTTCCGCCACATCCTTACAAGCACTTACAGAACTAAACGATGGGCAGCGATTAAACCTTGTATTAGAGACGT 16 2368137 0.807679161 9 14 96 0.954545455 1.322219295 0.181818182 0.375 0.545454545 16 1 0 21 3L:2368067-2368154 6 CG1317 FBtr0300773|FBtr0345587|FBtr0072901 2368012|2367841|2368012 2368638|2368638|2368638 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 2368070 2368145 3'utr CG1317 FlyBase G25464.1 ATTTTGACTTCCGCCACATCCTTACAAGCACTTACAGAACTAAACGATGGGCAGCGATTAAACCTTGTATTAGAGA 6 2368137 0.982231392 5 6 41 1 1.041392685 0.090909091 0.333333333 0.636363636 6 0 0 11 3L:2368070-2368145 6 6 2989 FBgn0035333 712.6366667 22.14333333 33.55333333 0.008419438 0.270961915 0.178819789 -5 -5 -5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 2368250 2368255 - 3L_2368250_2368255_- 1 0.540856049 0.770428024 0.324663836 CG1317 FBtr0072901|FBtr0300773|FBtr0345587 2368012|2368012|2367841 2368638|2368638|2368638 3L - 2368205 2368263 3'utr CG1317 FlyBase G33672.1 ATAGCTTAGTACCTTTGTTTTCCCAATCTTATTATCCTTTGCAATACGATTAATTTGTT 5 2368248 0.994454976 2 4 57 0.857142857 0.77815125 0.142857143 0.2 0.428571429 5 1 0 6 3L:2368205-2368263 6 CG1317 FBtr0300773|FBtr0345587|FBtr0072901 2368012|2367841|2368012 2368638|2368638|2368638 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L - 2368240 2368309 3'utr CG1317 FlyBase G25465.2 TATCTATTGCTCTGCGTTACGCAAGGATTTGGATTTGGATTTCGTTATAGCTTAGTACCTTTGTTTTCCC 9 2368248 0.992582761 4 6 81 0.9375 1.176091259 0.375 0.444444444 0.6875 9 1 0 15 3L:2368240-2368309 6 5 2990 FBgn0035333 712.6366667 22.14333333 33.55333333 0.007016198 0.225801596 0.149016491 -7 -7 -7 0.01 dme-miR-282-5p 7mer-A1 GAGGCTA 3L 2368550 2368556 - 3L_2368550_2368556_- 0.823349562 0.823349562 0.823349562 0 CG1317 FBtr0072901 2368012 2368638 3L - 2368533 2368575 3'utr CG1317 FlyBase G33673.1 AATAAATTATCAGCTCATGGAGGCTATTAGGTTCTCACGTTTA 129 2368558 0.913325701 6 126 996 0.981707317 1.90579588 0.018292683 0.209302326 0.37804878 129 2 1 161 3L:2368533-2368575 7 CG1317 FBtr0072901 2368012 2368638 GAGGCTA 7mer-A1 dme-miR-282-5p 3L - 2368531 2368595 3'utr CG1317 FlyBase G25466.1 GCGACAGGAGGAGGGGAATCAATAAATTATCAGCTCATGGAGGCTATTAGGTTCTCACGTTTAAA 59 2368558 0.982214949 5 57 415 0.99009901 2 0.02970297 0.474576271 0.693069307 59 1 0 100 3L:2368531-2368595 7 92 2991 FBgn0035333 712.6366667 22.14333333 33.55333333 0.129098044 4.15474936 2.741903437 2 2 2 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 23749013 23749019 + 3L_23749013_23749019_+ 0.801970437 0.801970437 0.801970437 0 CG17698 FBtr0111166|FBtr0111166|FBtr0111166|FBtr0333913|FBtr0333913|FBtr0333913|FBtr0333914|FBtr0333914|FBtr0333914|FBtr0333912|FBtr0333912|FBtr0333912 23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858 23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058 3L + 23748928 23749036 3'utr CG17698 FlyBase G32572.1 TTGAATTTGACAGTTTCCAAAAGCCAAACACTTGAAATACTTTAAAATATTTAATTATTAGTGATTAAATTTATGTATATTTTTTTGTGATAAAAATAAATTTAGAATA 92 23749011 0.983716914 20 80 1000 0.865384615 1.255272505 0.009615385 0.130434783 0.230769231 92 10 4 90 3L:23748928-23749036 7 CG17698 FBtr0333912|FBtr0333912|FBtr0333912|FBtr0333914|FBtr0333914|FBtr0333914|FBtr0333913|FBtr0333913|FBtr0333913|FBtr0111166|FBtr0111166|FBtr0111166 23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858 23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 23748896 23749045 3'utr CG17698 FlyBase G24619.1 TTTCATAGAACAAAAAAACCAATTTTTTATTTTTGAATTTGACAGTTTCCAAAAGCCAAACACTTGAAATACTTTAAAATATTTAATTATTAGTGATTAAATTTATGTATATTTTTTTGTGATAAAAATAAATTTAGAATATTATAAAGT 80 23749011 0.993574972 18 72 894 0.90990991 1.527200119 0.036036036 0.3125 0.504504505 80 8 2 101 3L:23748896-23749045 7 76 2992 FBgn0040056 619.7966667 30.24 46.48666667 0.12262086 2.513227513 1.634877384 2 2 2 0.01 dme-miR-79-3p 7mer-m8 TAGCTTT 3L 238415 238421 - 3L_238415_238421_- 0.620204031 0.620204031 0.620204031 0 E(bx) FBtr0072523|FBtr0301349 238321|238321 239039|239039 3L - 238392 238565 3'utr E(bx) FlyBase G32865.1 TAAAAGTGTGAATACCTTATTAAATATAAGTAAATATTACATAGTGAGTAGGAAGCACATTAAGCTTATTAACTTAACAATAATCCAGACTGTCACCTAATGTTAAAAACCAAGGCAAAAGTATTAGAACAACTTTGCTCCGATTAGCTTTTCTTGCCTGAGGGACATTTGGTT 473 238422 0.909691581 28 466 4097 0.983271375 2.723455672 0.161710037 0.122621564 0.228624535 473 9 0 529 3L:238392-238565 7 E(bx) FBtr0301349|FBtr0072523 238321|238321 239039|239039 TAGCTTT 7mer-m8 dme-miR-79-3p 3L - 238397 238443 3'utr E(bx) FlyBase G24849.1 ATTAGAACAACTTTGCTCCGATTAGCTTTTCTTGCCTGAGGGACATT 120 238422 0.850697121 11 116 1171 0.970238095 2.212187604 0.178571429 0.316666667 0.511904762 120 5 0 163 3L:238397-238443 7 168 2993 FBgn0000541 5641.79 79.62333333 122.1466667 0.029777783 2.109934274 1.375395699 1 1 1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 238990 238995 - 3L_238990_238995_- 0.755363009 0.755197617 0.755280313 0.000116955 E(bx) FBtr0072523|FBtr0072523|FBtr0072523|FBtr0301349|FBtr0301349|FBtr0301349 238321|238321|238321|238321|238321|238321 239039|239039|239039|239039|239039|239039 3L - 238954 239175 stop_codon E(bx) FlyBase G32869.1 AAATGGCAAACTTGGTGTTCTAGGCCCAACAAAAATATACTTGGCGGTACAGCCGGAAAATGCAGTTCAATCACAGCCACCTCCTCTAACCCCTGTTCACCAATCGGCTGCGCATCAGCAAGTGAGTAGTTTTTAGTTATAATTATAATGTAAAAGTATAAATGAGGAATAGGAACAGGACTGTGAGGGTTGCATTTGCTGATTCTCGACCGAAATGCCAAT 87 238992 0.950903422 21 85 381 0.980582524 1.703291378 0.203883495 0.149425287 0.281553398 87 1 1 101 3L:238954-239175 6 E(bx) FBtr0301349|FBtr0301349|FBtr0301349|FBtr0072523|FBtr0072523|FBtr0072523 238321|238321|238321|238321|238321|238321 239039|239039|239039|239039|239039|239039 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 238924 239014 3'utr E(bx) FlyBase G24853.1 ATGAGGAATAGGAACAGGACTGTGAGGGTTGCATTTGCTGATTCTCGACCGAAATGCCAATTTGTTTTTTGTTCCATCCTACGTTTAAGTT 36 238992 0.935286156 10 34 192 0.966666667 1.763427994 0.333333333 0.5 0.7 36 2 0 58 3L:238924-239014 6 40 2994 FBgn0000541 5641.79 79.62333333 122.1466667 0.007089948 0.502365303 0.327475166 -3 -3 -3 0.01 dme-miR-263a-5p 6mer3-8 GTGCCA 3L 2408753 2408758 + 3L_2408753_2408758_+ 0.999937149 0.999999452 0.9999683 4.41E-05 CG45186 FBtr0345113|FBtr0345115|FBtr0345114 2408340|2408340|2408340 2409103|2409103|2409103 3L + 2408726 2408778 3'utr CG45186 FlyBase G27311.1 AATTAATTGTTAATTTGACTGCAACTTGTGCCAATGATTTTTATACGTTTACT 71 2408754 0.824988414 11 69 619 0.977777778 1.643452676 0.022222222 0.23943662 0.4 71 1 1 88 3L:2408726-2408778 6 CG45186 FBtr0345113|FBtr0345115|FBtr0345114 2408340|2408340|2408340 2409103|2409103|2409103 GTGCCA 6mer3-8 dme-miR-263a-5p 3L + 2408696 2408771 3'utr CG45186 FlyBase G20674.1 CTTTAACACAGTTTCCTCGTTTTCCTTCTTAATTAATTGTTAATTTGACTGCAACTTGTGCCAATGATTTTTATAC 65 2408754 0.886445758 11 61 558 0.966666667 1.638489257 0 0.292307692 0.488888889 65 2 1 87 3L:2408696-2408771 6 60 2995 FBgn0266696 1930.986667 36.99 56.66666667 0.031072198 1.622060016 1.058823529 -1 -1 -1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 2464412 2464418 + 3L_2464412_2464418_+ 0.801970437 0.801970437 0.801970437 0 CG45186 FBtr0345103|FBtr0345103|FBtr0345103|FBtr0345098|FBtr0345098|FBtr0345098|FBtr0345085|FBtr0345085|FBtr0345085|FBtr0345087|FBtr0345087|FBtr0345087|FBtr0345110|FBtr0345110|FBtr0345110|FBtr0345092|FBtr0345092|FBtr0345092|FBtr0345111|FBtr0345111|FBtr0345111|FBtr0345100|FBtr0345100|FBtr0345100|FBtr0345094|FBtr0345094|FBtr0345094|FBtr0345099|FBtr0345099|FBtr0345099|FBtr0345096|FBtr0345096|FBtr0345096|FBtr0345109|FBtr0345109|FBtr0345109|FBtr0345093|FBtr0345093|FBtr0345093|FBtr0345088|FBtr0345088|FBtr0345088|FBtr0345102|FBtr0345102|FBtr0345102|FBtr0345095|FBtr0345095|FBtr0345095 2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302 2464849|2464849|2464849|2464571|2464571|2464571|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464558|2464558|2464558|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849 3L + 2464368 2464443 3'utr CG45186 FlyBase G27340.1 ACACAAACACAAATATTGCTCTCTTCGTGTGGGTCCGCGCTCAGTGTGATAGATGCGTCCGATCCTGATTCCAAGC 28 2464384 0.960225744 9 25 189 0.878787879 1.161368002 0.242424242 0.178571429 0.303030303 28 3 1 29 3L:2464368-2464443 7 CG45186 FBtr0345099|FBtr0345099|FBtr0345099|FBtr0345093|FBtr0345093|FBtr0345093|FBtr0345087|FBtr0345087|FBtr0345087|FBtr0345110|FBtr0345110|FBtr0345110|FBtr0345094|FBtr0345094|FBtr0345094|FBtr0345103|FBtr0345103|FBtr0345103|FBtr0345109|FBtr0345109|FBtr0345109|FBtr0345098|FBtr0345098|FBtr0345098|FBtr0345095|FBtr0345095|FBtr0345095|FBtr0345092|FBtr0345092|FBtr0345092|FBtr0345100|FBtr0345100|FBtr0345100|FBtr0345088|FBtr0345088|FBtr0345088|FBtr0345111|FBtr0345111|FBtr0345111|FBtr0345102|FBtr0345102|FBtr0345102|FBtr0345085|FBtr0345085|FBtr0345085|FBtr0345096|FBtr0345096|FBtr0345096 2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302 2464849|2464849|2464849|2464558|2464558|2464558|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464571|2464571|2464571|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 2464370 2464500 3'utr CG45186 FlyBase G20698.1 ACAAACACAAATATTGCTCTCTTCGTGTGGGTCCGCGCTCAGTGTGATAGATGCGTCCGATCCTGATTCCAAGCTATTAAGCTAACTAGTTGTCTCATAGTAATCCCAATAATGAAAACAAACTGAACGAA 31 2464384 0.982979515 12 29 217 0.958333333 1.662757832 0.354166667 0.419354839 0.625 31 2 0 46 3L:2464370-2464500 7 8.5 2996 FBgn0266696 1930.986667 36.99 56.66666667 0.004401895 0.229791836 0.15 28 28 28 0.01 dme-miR-79-3p 6mer2-7 AGCTTT 3L 2464678 2464683 + 3L_2464678_2464683_+ 1 1 1 0 CG45186 FBtr0345103|FBtr0345085|FBtr0345087|FBtr0345110|FBtr0345092|FBtr0345111|FBtr0345100|FBtr0345094|FBtr0345099|FBtr0345096|FBtr0345109|FBtr0345088|FBtr0345102|FBtr0345095 2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302 2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849 3L + 2464572 2464707 3'utr CG45186 FlyBase G27341.1 ATTTAAACCGAGAGACAGTTTTATTCCCAACGGCTCGTATATTAATTATGTCTGGCCAGCAAAGCCTTCCAGTTTACCTTTATCCTATATTATTATTATGCGAAACAGCTTTGTGCTTATTTATACATAATACACT 28 2464682 0.987888186 11 28 257 1 1.491361694 0.064516129 0.107142857 0.193548387 28 0 0 31 3L:2464572-2464707 6 CG45186 FBtr0345099|FBtr0345087|FBtr0345110|FBtr0345094|FBtr0345103|FBtr0345109|FBtr0345095|FBtr0345092|FBtr0345100|FBtr0345088|FBtr0345111|FBtr0345102|FBtr0345085|FBtr0345096 2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302 2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849 AGCTTT 6mer2-7 dme-miR-79-3p 3L + 2464669 2464701 3'utr CG45186 FlyBase G20699.2 ATGCGAAACAGCTTTGTGCTTATTTATACATAA 10 2464682 0.768610995 3 8 76 0.928571429 1.113943352 0.071428571 0.2 0.428571429 10 1 0 13 3L:2464669-2464701 6 12 2997 FBgn0266696 1930.986667 36.99 56.66666667 0.00621444 0.324412003 0.211764706 -4 -4 -4 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 2464736 2464741 + 3L_2464736_2464741_+ 1 1 1 0 CG45186 FBtr0345103|FBtr0345085|FBtr0345087|FBtr0345110|FBtr0345092|FBtr0345111|FBtr0345100|FBtr0345094|FBtr0345099|FBtr0345096|FBtr0345109|FBtr0345088|FBtr0345102|FBtr0345095 2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302 2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849 3L + 2464713 2464762 3'utr CG45186 FlyBase G27342.1 TTATTTACATTTAAAAACGAATTGTACCTTAAACGGAATTATATTATGAT 276 2464735 0.772560124 8 269 1579 0.968299712 2.049218023 0.18443804 0.195652174 0.360230548 276 9 2 336 3L:2464713-2464762 6 CG45186 FBtr0345099|FBtr0345087|FBtr0345110|FBtr0345094|FBtr0345103|FBtr0345109|FBtr0345095|FBtr0345092|FBtr0345100|FBtr0345088|FBtr0345111|FBtr0345102|FBtr0345085|FBtr0345096 2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302 2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 2464715 2464800 3'utr CG45186 FlyBase G20700.1 ATTTACATTTAAAAACGAATTGTACCTTAAACGGAATTATATTATGATGAGTATGTATTACATTTATTATTATTATTGTAATATTT 181 2464735 0.966755891 7 180 978 0.996363636 2.437750563 0.250909091 0.397790055 0.603636364 181 1 0 274 3L:2464715-2464800 6 222.5 2998 FBgn0266696 1930.986667 36.99 56.66666667 0.115226068 6.015139227 3.926470588 1 1 1 0.01 dme-miR-263a-5p 7mer-m8 GTGCCAT 3L 2492103 2492109 + 3L_2492103_2492109_+ 0.659000077 0.659000077 0.659000077 0 CG1146 FBtr0344219|FBtr0072921|FBtr0072923|FBtr0072922 2492069|2492069|2492069|2492069 2492613|2492613|2492613|2492613 3L + 2492089 2492160 3'utr CG1146 FlyBase G27354.1 AGGAACGTTTTATAGTGCCATCCCCCAGGGTCAGATGGAACAACCAGGTGAACTCCCATCCCAACCAGGCAT 35 2492107 0.807531554 7 33 140 0.953488372 1.612783857 0.186046512 0.228571429 0.372093023 35 2 0 41 3L:2492089-2492160 7 CG1146 FBtr0072923|FBtr0072922|FBtr0344219|FBtr0072921 2492069|2492069|2492069|2492069 2492613|2492613|2492613|2492613 GTGCCAT 7mer-m8 dme-miR-263a-5p 3L + 2492088 2492124 3'utr CG1146 FlyBase G20706.1 AAGGAACGTTTTATAGTGCCATCCCCCAGGGTCAGAT 13 2492106 0.802836265 3 13 66 1 1.322219295 0.285714286 0.461538462 0.666666667 13 0 0 21 3L:2492088-2492124 7 17 2999 FBgn0035346 752.39 49.49 76.20666667 0.022594665 0.343503738 0.223077596 -4 -3 -3.5 0.01 dme-miR-33-5p 8mer-A1 CAATGCAA 3L 2498660 2498667 + 3L_2498660_2498667_+ 0.634552243 0.634552243 0.634552243 0 CG45186 FBtr0345104|FBtr0345105|FBtr0345107|FBtr0345112|FBtr0345108|FBtr0345106 2498644|2498644|2498644|2498644|2498644|2498644 2499226|2499226|2499226|2499226|2499226|2499226 3L + 2498624 2498700 stop_codon CG45186 FlyBase G27363.1 GAAGGAGCGAGGGCTGTTTTAGGAGAGAGGCAGGCACAATGCAACTTTATAGACTTGAACACAATCACAAAACACAA 350 2498673 0.915462757 12 333 2006 0.959139785 2.047274867 0.010752688 0.251428571 0.43655914 350 16 3 446 3L:2498624-2498700 8 CG45186 FBtr0345112|FBtr0345107|FBtr0345105|FBtr0345104|FBtr0345106|FBtr0345108 2498644|2498644|2498644|2498644|2498644|2498644 2499226|2499226|2499226|2499226|2499226|2499226 CAATGCAA 8mer-A1 dme-miR-33-5p 3L + 2498626 2498714 stop_codon CG45186 FlyBase G20713.1 AGGAGCGAGGGCTGTTTTAGGAGAGAGGCAGGCACAATGCAACTTTATAGACTTGAACACAATCACAAAACACAAACCAAGCACTTTTA 239 2498673 0.974279634 12 224 1375 0.948424069 1.820857989 0.008595989 0.334728033 0.544412607 239 14 4 331 3L:2498626-2498714 8 278.5 3000 FBgn0266696 1930.986667 36.99 56.66666667 0.144226786 7.529061909 4.914705882 -13 -13 -13 0.01 dme-miR-968-5p 6mer3-8 ACTACT 3L 2498875 2498880 + 3L_2498875_2498880_+ 1 0.999996711 0.999998355 2.33E-06 CG45186 FBtr0345104|FBtr0345105|FBtr0345107|FBtr0345112|FBtr0345108|FBtr0345106 2498644|2498644|2498644|2498644|2498644|2498644 2499226|2499226|2499226|2499226|2499226|2499226 3L + 2498876 2498905 3'utr CG45186 FlyBase G27365.1 CTACTATGCAAGTGCACGATGCCAGGCAAT 7 2498895 0.745197051 3 6 25 0.857142857 0.77815125 0 0 0 7 1 0 6 3L:2498876-2498905 4 CG45186 FBtr0345112|FBtr0345107|FBtr0345105|FBtr0345104|FBtr0345106|FBtr0345108 2498644|2498644|2498644|2498644|2498644|2498644 2499226|2499226|2499226|2499226|2499226|2499226 ACTACT 6mer3-8 dme-miR-968-5p 3L + 2498867 2498946 3'utr CG45186 FlyBase G20714.1 ATGTAACGACTACTATGCAAGTGCACGATGCCAGGCAATAAATTTCAACTCGCTTCATTCGGTAGCTGTGCGGAGTTTGG 9 2498895 0.981991616 7 8 61 0.857142857 0.602059991 0.428571429 0.555555556 0.714285714 9 0 2 12 3L:2498867-2498946 6 3 3001 FBgn0266696 1930.986667 36.99 56.66666667 0.00155361 0.081103001 0.052941176 -20 -20 -20 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 3L 2498967 2498972 + 3L_2498967_2498972_+ 1 1 1 0 CG45186 FBtr0345104|FBtr0345105|FBtr0345107|FBtr0345112|FBtr0345108|FBtr0345106 2498644|2498644|2498644|2498644|2498644|2498644 2499226|2499226|2499226|2499226|2499226|2499226 3L + 2498915 2498990 3'utr CG45186 FlyBase G27366.1 CTCGCTTCATTCGGTAGCTGTGCGGAGTTTGGAGTTCTTCTATTATATCGTATACCTGTACATAATATTAAGTTGA 23 2498965 0.83496995 6 20 226 0.9 1.130333768 0.2 0.217391304 0.4 23 2 1 27 3L:2498915-2498990 6 CG45186 FBtr0345112|FBtr0345107|FBtr0345105|FBtr0345104|FBtr0345106|FBtr0345108 2498644|2498644|2498644|2498644|2498644|2498644 2499226|2499226|2499226|2499226|2499226|2499226 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 3L + 2498955 2498987 3'utr CG45186 FlyBase G20715.1 TATTATATCGTATACCTGTACATAATATTAAGT 5 2498965 0.793788746 2 5 49 1 1.041392685 0 0.4 0.727272727 5 0 0 11 3L:2498955-2498987 6 9 3002 FBgn0266696 1930.986667 36.99 56.66666667 0.00466083 0.243309002 0.158823529 2 2 2 0.01 dme-miR-1012-3p 6mer2-7 TGACTA 3L 250315 250320 - 3L_250315_250320_- 1 1 1 0 DIP2 FBtr0072520|FBtr0305325|FBtr0332108|FBtr0332110|FBtr0332109 250227|250227|250227|250227|250227 250509|250509|250509|250509|250509 3L - 250274 250328 3'utr DIP2 FlyBase G32911.1 CAATAAAATGACTATTTATCTTTATATGACCATATAAGTGACAGCAAACATTTAA 11 250314 0.993639333 4 9 103 0.818181818 0.954242509 0 0 0 11 2 0 9 3L:250274-250328 6 DIP2 FBtr0332109|FBtr0072520|FBtr0305325|FBtr0332108|FBtr0332110 250227|250227|250227|250227|250227 250509|250509|250509|250509|250509 TGACTA 6mer2-7 dme-miR-1012-3p 3L - 250283 250327 3'utr DIP2 FlyBase G24896.1 AATAAAATGACTATTTATCTTTATATGACCATATAAGTGACAGCA 9 250313 0.987669277 6 9 78 1 1.113943352 0 0.333333333 0.538461538 9 0 0 13 3L:250283-250327 6 8.5 3003 FBgn0024806 1152.88 23.42666667 35.82 0.00737284 0.362834377 0.237297599 -6 -7 -6.5 0.01 dme-miR-79-3p 8mer-A1 TAGCTTTA 3L 2507173 2507180 - 3L_2507173_2507180_- 0.625364009 0.625364009 0.625364009 0 Spn FBtr0304620|FBtr0304614|FBtr0304619 2506569|2505243|2505243 2508306|2508306|2508306 3L - 2507159 2507248 3'utr Spn FlyBase G33690.1 GGAAGCAAGCAGCTTCAAGAGCGATTTCTATTCGTTAGCAAGTATGTCTGTGTGAATGGGCGTGATTGTAGCTTTAATTTCAATTTACTT 161 2507182 0.825294478 11 156 1527 0.972972973 1.653212514 0.324324324 0.124223602 0.237837838 161 2 3 180 3L:2507159-2507248 8 Spn FBtr0304619|FBtr0304614|FBtr0304620 2505243|2505243|2506569 2508306|2508306|2508306 TAGCTTTA 8mer-A1 dme-miR-79-3p 3L - 2507158 2507246 3'utr Spn FlyBase G25473.3 AAGCAAGCAGCTTCAAGAGCGATTTCTATTCGTTAGCAAGTATGTCTGTGTGAATGGGCGTGATTGTAGCTTTAATTTCAATTTACTTT 124 2507182 0.797884509 15 122 1181 0.985221675 2 0.325123153 0.475806452 0.679802956 124 2 1 200 3L:2507158-2507246 8 89.5 3004 FBgn0010905 2101.51 31.02666667 47.43666667 0.042588425 2.884615385 1.886726161 2 2 2 0.01 dme-miR-33-5p 8mer-A1 CAATGCAA 3L 2507289 2507296 - 3L_2507289_2507296_- 0.634552243 0.634552243 0.634552243 0 Spn FBtr0304620|FBtr0304614|FBtr0304619 2506569|2505243|2505243 2508306|2508306|2508306 3L - 2507265 2507316 3'utr Spn FlyBase G33691.1 AGCAGTTTCAGCAGCCAAATCAATGCAAAGTGTCCACCCAAATTTGTTAAGC 148 2507297 0.962321248 3 144 624 0.976744186 2.225309282 0.081395349 0.135135135 0.255813953 148 4 0 168 3L:2507265-2507316 8 Spn FBtr0304619|FBtr0304614|FBtr0304620 2505243|2505243|2506569 2508306|2508306|2508306 CAATGCAA 8mer-A1 dme-miR-33-5p 3L - 2507270 2507340 3'utr Spn FlyBase G25474.1 TGAAATGCAGTCGGTTACATTTCGAGCAGTTTCAGCAGCCAAATCAATGCAAAGTGTCCACCCAAATTTGT 59 2507297 0.945031464 5 55 225 0.954022989 1.441956838 0.057471264 0.406779661 0.597701149 59 2 2 83 3L:2507270-2507340 8 102 3005 FBgn0010905 2101.51 31.02666667 47.43666667 0.048536528 3.287494628 2.150235402 1 1 1 0.01 dme-miR-317-5p 6mer2-7 TATCCC 3L 2507473 2507478 - 3L_2507473_2507478_- 1 1 1 0 Spn FBtr0304620|FBtr0304614|FBtr0304619 2506569|2505243|2505243 2508306|2508306|2508306 3L - 2507464 2507494 3'utr Spn FlyBase G33693.1 ACGGAACGTACTGTACTATCCCCTAAAAATT 14 2507481 0.58831537 5 14 71 1 1.255272505 0.222222222 0.214285714 0.388888889 14 0 0 18 3L:2507464-2507494 6 Spn FBtr0304619|FBtr0304614|FBtr0304620 2505243|2505243|2506569 2508306|2508306|2508306 TATCCC 6mer2-7 dme-miR-317-5p 3L - 2507416 2507497 3'utr Spn FlyBase G25475.1 TTTACGGAACGTACTGTACTATCCCCTAAAAATTAATGCTAAAGTATTGTACTGTATGCTATGCCTGAAAGTCATTTAAGTA 17 2507477 0.868674496 10 16 115 0.956521739 1.342422681 0.173913043 0.235294118 0.434782609 17 1 0 22 3L:2507416-2507497 6 10.5 3006 FBgn0010905 2101.51 31.02666667 47.43666667 0.004996407 0.338418565 0.221347762 3 -1 1 0.01 dme-miR-1012-3p 6mer2-7 TGACTA 3L 2507570 2507575 - 3L_2507570_2507575_- 1 1 1 0 Spn FBtr0304620|FBtr0304614|FBtr0304619 2506569|2505243|2505243 2508306|2508306|2508306 3L - 2507498 2507575 3'utr Spn FlyBase G33694.1 TGACTAGCGCATATTCAATAATATTCAATTCTAGATATACATATACATATGTGTGTGCAACAGTTATATGTCAAGACA 9 2507554 0.990493938 6 8 77 0.888888889 0.903089987 0 0 0 9 1 0 8 3L:2507498-2507575 6 Spn FBtr0304619|FBtr0304614|FBtr0304620 2505243|2505243|2506569 2508306|2508306|2508306 TGACTA 6mer2-7 dme-miR-1012-3p 3L - 2507537 2507597 3'utr Spn FlyBase G25476.1 ATTATTAATCTGTGTAATTTAATGACTAGCGCATATTCAATAATATTCAATTCTAGATATA 9 2507575 0.986858617 5 8 74 0.933333333 1.146128036 0.133333333 0.333333333 0.6 9 1 0 14 3L:2507537-2507597 6 3.5 3007 FBgn0010905 2101.51 31.02666667 47.43666667 0.001665469 0.112806188 0.073782587 -21 0 -10.5 0.01 dme-miR-8-3p 6mer3-8 CAGTAT 3L 2508251 2508256 - 3L_2508251_2508256_- 1 1 1 0 Spn FBtr0304617|FBtr0345046|FBtr0304613|FBtr0304620|FBtr0304618|FBtr0304616|FBtr0304615|FBtr0304621|FBtr0304614|FBtr0304619|FBtr0345047 2508045|2508045|2508045|2506569|2508045|2508045|2508045|2508045|2505243|2505243|2508045 2509405|2508306|2508306|2508306|2508306|2508306|2508306|2508306|2508306|2508306|2508306 3L - 2508214 2508308 stop_codon Spn FlyBase G33699.1 AGTTGAATTCTAGTTGATAAGCATCAAAGTAGCCAAAAACCAAAAGCATACGCAGTATATATTGTAGTCTATATACATACATGCATACACAACAC 30 2508260 0.97581507 12 29 188 0.971428571 1.531478917 0.057142857 0.166666667 0.285714286 30 1 0 34 3L:2508214-2508308 6 Spn FBtr0304619|FBtr0345047|FBtr0304621|FBtr0304614|FBtr0304620|FBtr0304618|FBtr0304617|FBtr0304616|FBtr0304615|FBtr0345046|FBtr0304613 2505243|2508045|2508045|2505243|2506569|2508045|2508045|2508045|2508045|2508045|2508045 2508306|2508306|2508306|2508306|2508306|2508306|2509405|2508306|2508306|2508306|2508306 CAGTAT 6mer3-8 dme-miR-8-3p 3L - 2508213 2508306 5'utr Spn FlyBase G25481.1 TTGAATTCTAGTTGATAAGCATCAAAGTAGCCAAAAACCAAAAGCATACGCAGTATATATTGTAGTCTATATACATACATGCATACACAACACA 16 2508246 0.976267093 10 14 89 0.782608696 1.255272505 0.043478261 0.375 0.565217391 16 5 0 18 3L:2508213-2508306 6 15.5 3008 FBgn0010905 2101.51 31.02666667 47.43666667 0.007375649 0.499570262 0.326751458 4 -10 -3 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3L 25114960 25114965 + 3L_25114960_25114965_+ 1 1 1 0 Set1 FBtr0302246|FBtr0113871|FBtr0113870|FBtr0302245|FBtr0302243|FBtr0302248|FBtr0302247|FBtr0302244|FBtr0113869 25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896 25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180 3L + 25114781 25114995 stop_codon Set1 FlyBase G32670.1 TCAAAGCAACCCATTGGTATCAACGAGGAAATAACTTACGACTATAAATTTCCACTAGAAGACGAAAAAATACCTTGTCTATGCGGCGCCCAAGGATGTCGGGGTACACTTAACTAATACTTATTTACAACAATGAATTAAATATTTTAGAGCACATAAATTTAATTTGTTCATAAAATCCAAAGTGGGGTACGTGTAAGTATATATAGTTTTTT 38 25114966 0.970350423 19 37 211 0.979591837 1.681241237 0.204081633 0.236842105 0.408163265 38 1 0 48 3L:25114781-25114995 6 Set1 FBtr0302248|FBtr0302247|FBtr0302244|FBtr0113869|FBtr0302246|FBtr0113870|FBtr0113871|FBtr0302245|FBtr0302243 25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896 25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 25114918 25114977 3'utr Set1 FlyBase G24702.1 TTAAATATTTTAGAGCACATAAATTTAATTTGTTCATAAAATCCAAAGTGGGGTACGTGT 10 25114966 0.980143904 4 8 58 0.933333333 0.84509804 0.4 0.4 0.6 10 0 1 14 3L:25114918-25114977 6 11 3009 FBgn0040022 1603.58 36.14666667 55.41666667 0.006859652 0.304315751 0.198496241 -6 -6 -6 0.01 dme-miR-283-5p 6mer3-8 TGATAT 3L 25115033 25115038 - 3L_25115033_25115038_- 1 1 1 0 MED21 FBtr0113739|FBtr0113740 25114922|25114922 25115218|25115218 3L - 25114923 25115180 3'utr MED21 FlyBase G39507.1 AAATTTAAGATAATGTATTTATTGCATTTTCGTTCGTGTTTACAGATCAAATGGGTTTTAGTATATACATATTGTTTTTATAAGTAAAGTATTTTAGCTTAATTTAGACCTAAACCATTTTGAACAGCACCTCTGACCTCGTTGATATAATTTTTATAATAATTAATTATAGTTTTAAGTTATAAAAAAAACTATATATACTTACACGTACCCCACTTTGGATTTTATGAACAAATTAAATTTATGTGCTCTAAAATA 233 25115047 0.985169696 44 212 1731 0.918149466 1.809559715 0.149466192 0.175965665 0.316725979 233 20 3 258 3L:25114923-25115180 6 MED21 FBtr0113740|FBtr0113739 25114922|25114922 25115218|25115218 TGATAT 6mer3-8 dme-miR-283-5p 3L - 25115017 25115176 3'utr MED21 FlyBase G29845.1 TTAAGATAATGTATTTATTGCATTTTCGTTCGTGTTTACAGATCAAATGGGTTTTAGTATATACATATTGTTTTTATAAGTAAAGTATTTTAGCTTAATTTAGACCTAAACCATTTTGAACAGCACCTCTGACCTCGTTGATATAATTTTTATAATAATT 141 25115047 0.725898796 26 133 967 0.9543379 1.475048246 0.210045662 0.34751773 0.579908676 141 4 6 209 3L:25115017-25115176 6 117.5 3010 FBgn0040020 302.5833333 44.85333333 68.74333333 0.388322776 2.619649227 1.709256655 9 9 9 0.01 "dme-miR-995-3p,dme-miR-998-3p" 6mer2-7 GGTGCT 3L 25115050 25115055 + 3L_25115050_25115055_+ 1 1 1 0 Set1 FBtr0302246|FBtr0113871|FBtr0113870|FBtr0302245|FBtr0302243|FBtr0302248|FBtr0302247|FBtr0302244|FBtr0113869 25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896 25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180 3L + 25115002 25115088 3'utr Set1 FlyBase G32671.1 CTTAAAACTATAATTAATTATTATAAAAATTATATCAACGAGGTCAGAGGTGCTGTTCAAAATGGTTTAGGTCTAAATTAAGCTAAA 31 25115056 0.978840637 12 30 203 0.970588235 1.51851394 0.235294118 0.096774194 0.176470588 31 1 0 33 3L:25115002-25115088 6 Set1 FBtr0302248|FBtr0302247|FBtr0302244|FBtr0113869|FBtr0302246|FBtr0113870|FBtr0113871|FBtr0302245|FBtr0302243 25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896 25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180 GGTGCT 6mer2-7 "dme-miR-995-3p,dme-miR-998-3p" 3L + 25115023 25115089 3'utr Set1 FlyBase G24703.1 TATAAAAATTATATCAACGAGGTCAGAGGTGCTGTTCAAAATGGTTTAGGTCTAAATTAAGCTAAAA 31 25115054 0.702702687 11 27 162 0.88 1.342422681 0.26 0.451612903 0.66 31 5 1 44 3L:25115023-25115089 6 21 3011 FBgn0040022 1603.58 36.14666667 55.41666667 0.013095698 0.580966433 0.378947368 -6 -4 -5 0.01 dme-bantam-3p 6mer3-8 TGATCT 3L 25115132 25115137 + 3L_25115132_25115137_+ 1 1 1 0 Set1 FBtr0302246|FBtr0113871|FBtr0113870|FBtr0302245|FBtr0302243|FBtr0302248|FBtr0302247|FBtr0302244|FBtr0113869 25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896 25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180 3L + 25115100 25115180 3'utr Set1 FlyBase G32672.1 ATAAAAACAATATGTATATACTAAAACCCATTTGATCTGTAAACACGAACGAAAATGCAATAAATACATTATCTTAAATTT 124 25115131 0.755210737 15 121 710 0.966666667 2.161368002 0.06 0.177419355 0.32 124 5 0 145 3L:25115100-25115180 6 Set1 FBtr0302248|FBtr0302247|FBtr0302244|FBtr0113869|FBtr0302246|FBtr0113870|FBtr0113871|FBtr0302245|FBtr0302243 25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896 25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180 TGATCT 6mer3-8 dme-bantam-3p 3L + 25115108 25115166 3'utr Set1 FlyBase G24704.1 AATATGTATATACTAAAACCCATTTGATCTGTAAACACGAACGAAAATGCAATAAATAC 105 25115131 0.99295358 6 103 573 0.986842105 1.875061263 0.059210526 0.361904762 0.559210526 105 1 1 150 3L:25115108-25115166 6 102 3012 FBgn0040022 1603.58 36.14666667 55.41666667 0.063607678 2.821836961 1.840601504 1 1 1 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 3L 2555890 2555895 - 3L_2555890_2555895_- 1 1 1 0 msn FBtr0333364|FBtr0333362|FBtr0072959|FBtr0333365|FBtr0072956|FBtr0072958|FBtr0072957|FBtr0333363 2555772|2555772|2555772|2554845|2554845|2554845|2554845|2555772 2556555|2556555|2556555|2556555|2556555|2556555|2556555|2556555 3L - 2555889 2555929 3'utr msn FlyBase G33742.1 TGTCGTTTCACGATTGTGTATGATTTCGCTTACAAGTTAAA 10 2555908 0.796792999 5 10 86 1 1.204119983 0.1875 0.4 0.625 10 0 0 16 3L:2555889-2555929 6 msn FBtr0072957|FBtr0333363|FBtr0072956|FBtr0072958|FBtr0072959|FBtr0333365|FBtr0333364|FBtr0333362 2554845|2555772|2554845|2554845|2555772|2554845|2555772|2555772 2556555|2556555|2556555|2556555|2556555|2556555|2556555|2556555 AGTTAA 6mer3-8 dme-miR-999-3p 3L - 2555877 2555937 3'utr msn FlyBase G25511.1 ATTTCAAATGTCGTTTCACGATTGTGTATGATTTCGCTTACAAGTTAAACTTAAGTTGAAA 13 2555908 0.70765889 7 12 118 1 1.278753601 0.157894737 0.384615385 0.578947368 13 0 0 19 3L:2555877-2555937 6 2.5 3013 FBgn0010909 7320.6 159.8166667 245.3066667 0.000341502 0.015642924 0.010191325 13 13 13 0.01 dme-miR-970-3p 7mer-A1 CTTATGA 3L 2556227 2556233 - 3L_2556227_2556233_- 0.823349562 0.823349562 0.823349562 0 msn FBtr0333364|FBtr0333362|FBtr0072959|FBtr0333365|FBtr0072956|FBtr0072958|FBtr0072957|FBtr0333363 2555772|2555772|2555772|2554845|2554845|2554845|2554845|2555772 2556555|2556555|2556555|2556555|2556555|2556555|2556555|2556555 3L - 2556152 2556264 3'utr msn FlyBase G33744.1 CATACCAACAACCCGAGGTCATGAACTTGTGCTTATGAAATTCACCACGACAACGTTTCAATTAGTAAATGTGCTAAGAAAACTCGATCAACGCGAGTCTATATATATATATA 15 2556237 0.985373384 6 12 100 0.736842105 1.146128036 0.105263158 0.133333333 0.315789474 15 5 0 14 3L:2556152-2556264 7 msn FBtr0072957|FBtr0333363|FBtr0072956|FBtr0072958|FBtr0072959|FBtr0333365|FBtr0333364|FBtr0333362 2554845|2555772|2554845|2554845|2555772|2554845|2555772|2555772 2556555|2556555|2556555|2556555|2556555|2556555|2556555|2556555 CTTATGA 7mer-A1 dme-miR-970-3p 3L - 2556176 2556243 3'utr msn FlyBase G25513.1 TGAACTTGTGCTTATGAAATTCACCACGACAACGTTTCAATTAGTAAATGTGCTAAGAAAACTCGATC 13 2556204 0.706290568 7 12 83 0.882352941 1.176091259 0 0.230769231 0.411764706 13 2 0 15 3L:2556176-2556243 7 7 3014 FBgn0010909 7320.6 159.8166667 245.3066667 0.000956206 0.043800188 0.02853571 4 -29 -12.5 0.01 dme-miR-980-3p 6mer3-8 GGCAGC 3L 2556488 2556493 - 3L_2556488_2556493_- 1 1 1 0 msn FBtr0333364|FBtr0333362|FBtr0072959|FBtr0333365|FBtr0072956|FBtr0072958|FBtr0072957|FBtr0333363 2555772|2555772|2555772|2554845|2554845|2554845|2554845|2555772 2556555|2556555|2556555|2556555|2556555|2556555|2556555|2556555 3L - 2556491 2556541 3'utr msn FlyBase G33747.1 AACCAATCCAATTCAATCCAATCCAATCGACGATCGATGATCGTGGCAGGC 16 2556503 0.847041539 6 13 77 0.8 1.204119983 0.05 0.1875 0.35 16 4 0 16 3L:2556491-2556541 2 msn FBtr0072957|FBtr0333363|FBtr0072956|FBtr0072958|FBtr0072959|FBtr0333365|FBtr0333364|FBtr0333362 2554845|2555772|2554845|2554845|2555772|2554845|2555772|2555772 2556555|2556555|2556555|2556555|2556555|2556555|2556555|2556555 GGCAGC 6mer3-8 dme-miR-980-3p 3L - 2556446 2556537 3'utr msn FlyBase G25515.1 AATCCAATTCAATCCAATCCAATCGACGATCGATGATCGTGGCAGGCAGCCTTCGATCGACGGCCCAGCGATCGATTTGCTCAACCGGCAAC 15 2556488 0.938673689 9 15 59 1 1.255272505 0.166666667 0.133333333 0.277777778 15 0 0 18 3L:2556446-2556537 6 4.5 3015 FBgn0010909 7320.6 159.8166667 245.3066667 0.000614704 0.028157264 0.018344385 10 -5 2.5 0.01 dme-miR-304-5p 6mer2-7 GAGATT 3L 2595135 2595140 + 3L_2595135_2595140_+ 1 1 1 0 dos FBtr0072926|FBtr0072927 2595045|2595045 2595590|2595590 3L + 2594882 2595283 stop_codon dos FlyBase G27391.1 TCACAAGGCGGAAATGGAGCTAGTGGAATGCGATTCGCAGGCGTCGAAGCTGGCGGAGCTCGAGCGCCAGTGCCTAGCAGCGTGGTCTATAGATCCGTGGACTTTGTCAAGACGGAGGCATTTAAGAGGATTCGAGAGGAGCGCGAGAGCAGCGGCAACAAGTGAAACTGCTGGTTCAGCTAAATGAAATCATATCTCCAGTACATCTACTTGTCAACGTGCAATAGCAAAGGAAGGACCATGTTGCTGATCCGAGATTTTCGTAGTGCCTATTGGTGGTCAGCTGAGGAGAGCTGACCCCATCCAAAAACAGTGCAAATTTCGAGTGGCTTTTACATTCGTTAACATCGTCAAATTCATTATTCATTAAACCACATATCTAGCTTGTAAGACGGCACCAGC 132 2595154 0.981727473 39 118 866 0.8875 1.67516709 0.29375 0.166666667 0.3125 132 16 2 142 3L:2594882-2595283 6 dos FBtr0072926|FBtr0072927 2595045|2595045 2595590|2595590 GAGATT 6mer2-7 dme-miR-304-5p 3L + 2595035 2595167 stop_codon dos FlyBase G20738.1 GGCAACAAGTGAAACTGCTGGTTCAGCTAAATGAAATCATATCTCCAGTACATCTACTTGTCAACGTGCAATAGCAAAGGAAGGACCATGTTGCTGATCCGAGATTTTCGTAGTGCCTATTGGTGGTCAGCTG 46 2595155 0.985915861 15 41 329 0.863013699 1.799340549 0.191780822 0.413043478 0.630136986 46 10 0 63 3L:2595035-2595167 6 13.5 3016 FBgn0016794 1172.68 41.23 62.95666667 0.011512092 0.327431482 0.214433208 -19 -20 -19.5 0.01 dme-miR-33-5p 8mer-A1 CAATGCAA 3L 2595437 2595444 + 3L_2595437_2595444_+ 0.634552243 0.634552243 0.634552243 0 dos FBtr0072926|FBtr0072927 2595045|2595045 2595590|2595590 3L + 2595284 2595471 3'utr dos FlyBase G27392.1 ATTTCTGTGTGCTGTTTTGAATCTGTAATCTGTAACCCGTATCTGAATCTATGTCGTATTCGTATTTAAATCGTGCTTCCAACACTTCCATGTTTATTGTTAAGCTTCGGAATCAAAATGTAACCATGACAAACGATCTTAGTGCTAATTTTACAATGCAAACAATTATTTTATATACGCAAGCGAAA 142 2595424 0.884786622 36 132 1197 0.933333333 1.447158031 0.116666667 0.225352113 0.388888889 142 7 5 168 3L:2595284-2595471 8 dos FBtr0072926|FBtr0072927 2595045|2595045 2595590|2595590 CAATGCAA 8mer-A1 dme-miR-33-5p 3L + 2595373 2595472 3'utr dos FlyBase G20739.2 ATGTTTATTGTTAAGCTTCGGAATCAAAATGTAACCATGACAAACGATCTTAGTGCTAATTTTACAATGCAAACAATTATTTTATATACGCAAGCGAAAT 49 2595425 0.711057503 18 44 309 0.941176471 1.329058719 0.088235294 0.285714286 0.485294118 49 2 2 64 3L:2595373-2595472 8 12.5 3017 FBgn0016794 1172.68 41.23 62.95666667 0.010659344 0.303177298 0.198549267 13 12 12.5 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 3L 2595548 2595553 + 3L_2595548_2595553_+ 0.939138029 0.999999659 0.969568844 0.043035721 dos FBtr0072926|FBtr0072927 2595045|2595045 2595590|2595590 3L + 2595491 2595587 3'utr dos FlyBase G27393.1 TATATGGTAACAAATTATTTACAATTTAATAATGTAACTCGTGTGCGACACAAGCTGTAGCTTGATTTTGTGCTTTAAAAAATATATATACAATAAT 40 2595559 0.986557692 13 40 349 1 1.698970004 0.06 0.125 0.3 40 0 0 50 3L:2595491-2595587 6 dos FBtr0072926|FBtr0072927 2595045|2595045 2595590|2595590 TAGCTT 6mer3-8 dme-miR-79-3p 3L + 2595513 2595600 3'utr dos FlyBase G20740.1 AATTTAATAATGTAACTCGTGTGCGACACAAGCTGTAGCTTGATTTTGTGCTTTAAAAAATATATATACAATAATACCAATTTTGTGT 24 2595559 0.987019227 10 24 208 1 1.491361694 0.161290323 0.291666667 0.451612903 24 0 0 31 3L:2595513-2595600 6 23 3018 FBgn0016794 1172.68 41.23 62.95666667 0.019613194 0.557846228 0.365330651 -11 -11 -11 0.01 dme-bantam-3p 6mer2-7 GATCTC 3L 26226162 26226167 + 3L_26226162_26226167_+ 1 0.985955256 0.992977628 0.009931103 CG40160 FBtr0333380 26225913 26229433 3L + 26226131 26226182 3'utr CG40160 FlyBase G32715.1 GAAAACGAGTCTGTGTATATTACAAAATTGAGATCTCTGGAACTATAAAGGT 11 26226168 0.97818973 3 10 67 0.923076923 1.079181246 0.076923077 0.181818182 0.307692308 11 1 0 12 3L:26226131-26226182 6 CG40160 FBtr0333380 26225913 26229433 GATCTC 6mer2-7 dme-bantam-3p 3L + 26226152 26226177 3'utr CG40160 FlyBase G24741.1 ACAAAATTGAGATCTCTGGAACTATA 5 26226168 0.662444302 2 5 25 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3L:26226152-26226177 6 7.5 3019 FBgn0058160 1218.203333 81.38333333 124.1133333 0.006156608 0.092156461 0.06042864 -6 -6 -6 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 2641033 2641038 + 3L_2641033_2641038_+ 0.999811987 0.999842707 0.999827347 2.17E-05 MEP-1 FBtr0072931|FBtr0072933|FBtr0290340|FBtr0072936|FBtr0072934|FBtr0072932|FBtr0072935 2641015|2641015|2641015|2641015|2641015|2641015|2641015 2641984|2641984|2641984|2641984|2641984|2641984|2641984 3L + 2641014 2641143 stop_codon MEP-1 FlyBase G27420.1 TAAAGAGCATGTTGGATCAACCAAAAACCTAATCTCGCAACGTTTGCAGCATTGACAGCGCTTTAACATTAGTTTCGTTTTTAAGCCGAACGCGACATTGGCGCCTCACGGTCCCGCTCCTTTACTTCTG 69 2641043 0.825875524 18 63 353 0.914634146 1.273001272 0.073170732 0.130434783 0.268292683 69 4 3 75 3L:2641014-2641143 6 MEP-1 FBtr0072935|FBtr0072932|FBtr0072934|FBtr0072936|FBtr0290340|FBtr0072933|FBtr0072931 2641015|2641015|2641015|2641015|2641015|2641015|2641015 2641984|2641984|2641984|2641984|2641984|2641984|2641984 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 2641010 2641088 stop_codon MEP-1 FlyBase G20763.1 AGATTAAAGAGCATGTTGGATCAACCAAAAACCTAATCTCGCAACGTTTGCAGCATTGACAGCGCTTTAACATTAGTTT 21 2641057 0.957728059 10 19 106 0.9375 1.477121255 0.15625 0.333333333 0.5625 21 2 0 30 3L:2641010-2641088 6 23.5 3020 FBgn0035357 2000.076667 48.38333333 74.09333333 0.01174955 0.485704444 0.317167536 -10 -24 -17 0.01 dme-miR-1012-3p 6mer2-7 TGACTA 3L 2641496 2641501 + 3L_2641496_2641501_+ 0.999963336 0.999997763 0.99998055 2.44E-05 MEP-1 FBtr0072931|FBtr0072933|FBtr0290340|FBtr0072936|FBtr0072934|FBtr0072932|FBtr0072935 2641015|2641015|2641015|2641015|2641015|2641015|2641015 2641984|2641984|2641984|2641984|2641984|2641984|2641984 3L + 2641430 2641520 3'utr MEP-1 FlyBase G27422.1 ACATATATATTTAACTATATTTAAAGCATATTATGAAGAAGCCGCCAGAGCGCATCGTCAGCATGATGACTATGTAAATTAGTTAAAAACT 31 2641501 0.970555489 11 28 166 0.923076923 1.255272505 0.153846154 0.161290323 0.333333333 31 2 1 36 3L:2641430-2641520 6 MEP-1 FBtr0072935|FBtr0072932|FBtr0072934|FBtr0072936|FBtr0290340|FBtr0072933|FBtr0072931 2641015|2641015|2641015|2641015|2641015|2641015|2641015 2641984|2641984|2641984|2641984|2641984|2641984|2641984 TGACTA 6mer2-7 dme-miR-1012-3p 3L + 2641281 2641509 3'utr MEP-1 FlyBase G20765.1 TCACTTGCTGCGGCTACAGGATACGCGATACACATAACGCTAACGGCATAGATTCACTAGAGATACTAGTTACGGATTTTAGTTACATACGTTTTGGAGTGTGCACATAAGTTGAAGTTGTAGCTACTACTAAAATATACCACATACATACATATATATTTAACTATATTTAAAGCATATTATGAAGAAGCCGCCAGAGCGCATCGTCAGCATGATGACTATGTAAATT 49 2641496 0.980043356 23 43 287 0.897058824 1.484299839 0.25 0.346938776 0.529411765 49 6 1 61 3L:2641281-2641509 6 16 3021 FBgn0035357 2000.076667 48.38333333 74.09333333 0.007999693 0.330692387 0.215943855 -5 0 -2.5 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3L 2641556 2641561 + 3L_2641556_2641561_+ 1 1 1 0 MEP-1 FBtr0072931|FBtr0072933|FBtr0290340|FBtr0072936|FBtr0072934|FBtr0072932|FBtr0072935 2641015|2641015|2641015|2641015|2641015|2641015|2641015 2641984|2641984|2641984|2641984|2641984|2641984|2641984 3L + 2641526 2641602 3'utr MEP-1 FlyBase G27423.1 ATTTATACGAGAACTACGAGTATCCAAATGTGTGTTGCAGTATGTATATACATTTTGAAAAGGTCCCCGCCCCGCAG 28 2641556 0.972607606 9 27 189 1 1.544068044 0.228571429 0.214285714 0.371428571 28 0 0 35 3L:2641526-2641602 6 MEP-1 FBtr0072935|FBtr0072932|FBtr0072934|FBtr0072936|FBtr0290340|FBtr0072933|FBtr0072931 2641015|2641015|2641015|2641015|2641015|2641015|2641015 2641984|2641984|2641984|2641984|2641984|2641984|2641984 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 2641518 2641578 3'utr MEP-1 FlyBase G20765.2 ACTAAACTATTTATACGAGAACTACGAGTATCCAAATGTGTGTTGCAGTATGTATATACAT 15 2641556 0.980043341 5 13 97 0.95 1.278753601 0.15 0.214285714 0.45 14 1 0 19 3L:2641518-2641578 6 15 3022 FBgn0035357 2000.076667 48.38333333 74.09333333 0.007499713 0.310024113 0.202447364 0 0 0 0.01 dme-bantam-3p 6mer3-8 TGATCT 3L 2641735 2641740 + 3L_2641735_2641740_+ 1 1 1 0 MEP-1 FBtr0072931|FBtr0072933|FBtr0290340|FBtr0072936|FBtr0072934|FBtr0072932|FBtr0072935 2641015|2641015|2641015|2641015|2641015|2641015|2641015 2641984|2641984|2641984|2641984|2641984|2641984|2641984 3L + 2641612 2641772 3'utr MEP-1 FlyBase G27424.1 GTGCCTCGCTTCGTTCTTCTCTCGAATCTTCTAGCTTATTTGTACGAACAGTCATGATGATGATGAGGCAGAGAGGAGGAAGTTGCATGAAGCGAAGCGTGGGGGGGAAGGACTCTTCTAAACTGATCTGAGAGACGACGAGACGTTCGACATTTTAATTT 255 2641735 0.986680811 16 241 1215 0.962837838 1.977723605 0.476351351 0.133333333 0.253378378 255 9 2 285 3L:2641612-2641772 6 MEP-1 FBtr0072935|FBtr0072932|FBtr0072934|FBtr0072936|FBtr0290340|FBtr0072933|FBtr0072931 2641015|2641015|2641015|2641015|2641015|2641015|2641015 2641984|2641984|2641984|2641984|2641984|2641984|2641984 TGATCT 6mer3-8 dme-bantam-3p 3L + 2641657 2641764 3'utr MEP-1 FlyBase G20766.1 GAACAGTCATGATGATGATGAGGCAGAGAGGAGGAAGTTGCATGAAGCGAAGCGTGGGGGGGAAGGACTCTTCTAAACTGATCTGAGAGACGACGAGACGTTCGACAT 176 2641735 0.968935979 15 167 825 0.937037037 2.102090526 0.462962963 0.392045455 0.603703704 176 16 1 253 3L:2641657-2641764 6 159 3023 FBgn0035357 2000.076667 48.38333333 74.09333333 0.079496953 3.286255598 2.145942055 0 0 0 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3L 265513 265518 + 3L_265513_265518_+ 1 1 1 0 mRpL17 FBtr0310415 265443 265932 3L + 265436 265533 stop_codon mRpL17 FlyBase G26746.1 GTTCACTAATAGCTCTTTTCACTAACCGCCTGTTTATTTAGTAGATTAGCAAGCAGTTTGTCGCTTAGAATTCACGTAAGACTTAAAAGCATCTTTAT 49 265512 0.981346297 10 47 343 0.964912281 1.740362689 0.087719298 0.142857143 0.263157895 49 2 0 55 3L:265436-265533 6 mRpL17 FBtr0310415|FBtr0072503 265443|265443 265932|265596 AAGACT 6mer3-8 dme-miR-14-3p 3L + 265470 265534 3'utr mRpL17 FlyBase G20223.1 TATTTAGTAGATTAGCAAGCAGTTTGTCGCTTAGAATTCACGTAAGACTTAAAAGCATCTTTATT 26 265512 0.871114006 8 25 173 1 1.505149978 0.21875 0.153846154 0.3125 26 0 0 32 3L:265470-265534 6 21.5 3024 FBgn0035122 140.4333333 18.93666667 28.89666667 0.153097555 1.135363492 0.744030453 1 1 1 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 3L 27083335 27083340 - 3L_27083335_27083340_- 0.999842316 0.999352667 0.999597491 0.000346199 CG40228 FBtr0113841 27082089 27083460 3L - 27083316 27083426 3'utr CG40228 FlyBase G39587.1 TAAATTGCTAGAGCCCTCTAAATTATACCATAAAATAAGTTTAATACAAAAAATTTAGCATAATAGCGAGATTGAAATAAACATTTTTGACTTATTAAAATAAGCTGAACC 48 27083340 0.808217654 12 44 415 0.98245614 1.447158031 0.052631579 0.14893617 0.298245614 47 0 1 56 3L:27083316-27083426 6 CG40228 FBtr0113841 27082089 27083460 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 27083302 27083378 3'utr CG40228 FlyBase G29908.1 AAAAATTTAGCATAATAGCGAGATTGAAATAAACATTTTTGACTTATTAAAATAAGCTGAACCCATGAAATTCTAAC 31 27083340 0.988977688 9 29 281 0.958333333 1.361727836 0.041666667 0.387096774 0.604166667 31 1 1 46 3L:27083302-27083378 6 31.5 3025 FBgn0063670 550.58 55.34333333 84.84333333 0.057212394 0.569174246 0.371272542 0 0 0 0.01 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA 3L 27156053 27156060 + 3L_27156053_27156060_+ 0.625653146 0.627007348 0.626330247 0.000957564 vtd FBtr0344093 27147810 27157999 3L + 27156035 27156070 3'utr vtd FlyBase G32749.1 ATGAAACCGATGAGCAATTTGAAGAACGTGTTTTAA 8 27156045 0.80493186 3 6 37 0.666666667 0.77815125 0.333333333 0.125 0.222222222 8 3 0 6 3L:27156035-27156070 8 vtd FBtr0344093 27147810 27157999 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p 3L + 27156035 27156094 3'utr vtd FlyBase G24766.1 ATGAAACCGATGAGCAATTTGAAGAACGTGTTTTAAACAAGAGAGCCGCCCACCTTTTTA 6 27156053 0.965967021 5 5 30 0.9 0.954242509 0.4 0.333333333 0.6 6 1 0 9 3L:27156035-27156094 8 5.5 3026 FBgn0260987 2370.69 125.3933333 192.4 0.00232 0.043861981 0.028586279 8 0 4 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 2718675 2718682 - 3L_2718675_2718682_- 0.500120318 0.500120318 0.500120318 0 Mrtf FBtr0306331 2717613 2719787 3L - 2718662 2718708 3'utr Mrtf FlyBase G33796.1 CGTAAAGTAGTTAAATCCTGCGGCGTGTACTTAACGCACATTTTGTA 148 2718683 0.856178598 8 142 1096 0.963636364 2.201397124 0.218181818 0.114864865 0.206060606 148 6 0 159 3L:2718662-2718708 8 Mrtf FBtr0306331 2717613 2719787 GTACTTAA 8mer-A1 dme-miR-252-5p 3L - 2718660 2718706 3'utr Mrtf FlyBase G25564.1 TAAAGTAGTTAAATCCTGCGGCGTGTACTTAACGCACATTTTGTAAC 96 2718683 0.829986631 7 96 709 1 2.193124598 0.230769231 0.46875 0.673076923 96 0 0 156 3L:2718660-2718706 8 122 3027 FBgn0052296 573.0466667 9.693333333 14.89 0.212897146 12.58596974 8.193418402 1 1 1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 27420971 27420976 + 3L_27420971_27420976_+ 1 1 1 0 Dbp80 FBtr0331783|FBtr0331783|FBtr0331783 27391041|27391041|27391041 27422159|27422159|27422159 3L + 27420943 27420981 intron-3'utr Dbp80 FlyBase G32785.1 TGCCCGTAGACCTTGATGGGATGGCTGACTGTGAAACTT 25 27420968 0.8315868 3 24 149 0.966666667 1.462397998 0.066666667 0.16 0.3 25 1 0 29 3L:27420943-27420981 6 Dbp80 FBtr0331783|FBtr0331783|FBtr0331783 27391041|27391041|27391041 27422159|27422159|27422159 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 27420955 27420987 3'utr Dbp80 FlyBase G24795.1 TTGATGGGATGGCTGACTGTGAAACTTATTTAC 7 27420968 0.773677516 3 7 44 1 1.113943352 0 0.571428571 0.769230769 7 0 0 13 3L:27420955-27420987 6 15.5 3028 FBgn0024804 412.37 35.54666667 54.31666667 0.037587603 0.436046512 0.285363608 3 3 3 0.01 dme-miR-252-5p 6mer3-8 GTACTT 3L 2768674 2768679 - 3L_2768674_2768679_- 1 1 1 0 CG9977 FBtr0073016 2768464 2769383 3L - 2768624 2768685 3'utr CG9977 FlyBase G33808.1 ACTTTTGTACTTTCGTTTCGTCCCGAGAGCGTTAATGGAACAGCAGTGCAAGGTATTCCATT 23 2768670 0.941067843 4 20 175 0.9 1.130333768 0.133333333 0.217391304 0.4 23 2 1 27 3L:2768624-2768685 6 CG9977 FBtr0073016 2768464 2769383 GTACTT 6mer3-8 dme-miR-252-5p 3L - 2768649 2768688 3'utr CG9977 FlyBase G25568.1 TATACTTTTGTACTTTCGTTTCGTCCCGAGAGCGTTAATG 13 2768670 0.722802908 2 13 116 1 1.361727836 0 0.307692308 0.608695652 13 0 0 23 3L:2768649-2768688 6 16.5 3029 FBgn0035371 904.8966667 36.27333333 55.58666667 0.018234126 0.454879618 0.296833773 -9 -9 -9 0.01 dme-miR-31a-5p 7mer-m8 TCTTGCC 3L 2769056 2769062 - 3L_2769056_2769062_- 0.661615243 0.661615243 0.661615243 0 CG9977 FBtr0073016 2768464 2769383 3L - 2769053 2769234 3'utr CG9977 FlyBase G33810.1 AGAACACAAAGTTACTATTACCATTGTATTGCTTAGTTTAGCTCGAGCGGAATTCTTGGTTGCTTTTCGTTAGCATTTAAAGTCTTCGACATAGTATTTAGCACTCGCTTTAGCCGCAGGAGTATTCTCTCCGTTCACCTATCCAACATGACTCTCTAATCCCCAAAACTAATCTTGCCCCA 33 2769076 0.98861351 14 29 267 0.914285714 1.505149978 0.028571429 0.060606061 0.114285714 33 3 0 32 3L:2769053-2769234 7 CG9977 FBtr0073016 2768464 2769383 TCTTGCC 7mer-m8 dme-miR-31a-5p 3L - 2769041 2769096 3'utr CG9977 FlyBase G25569.1 CTATCCAACATGACTCTCTAATCCCCAAAACTAATCTTGCCCCAAGAATTTATCCC 6 2769081 0.991146157 4 4 41 0.5 0.77815125 0 0.5 0.75 6 6 0 6 3L:2769041-2769096 7 2 3030 FBgn0035371 904.8966667 36.27333333 55.58666667 0.002210197 0.055136923 0.035979851 14 19 16.5 0.01 dme-miR-252-5p 8mer-m1 GTACTTAG 3L 2785689 2785696 + 3L_2785689_2785696_+ 0.636789085 0.636789085 0.636789085 0 pgant6 FBtr0333442|FBtr0072972|FBtr0072973 2785657|2785657|2785657 2786010|2786010|2786010 3L + 2785618 2785738 stop_codon pgant6 FlyBase G27471.1 CGCTGGACAACTACTCGCAGGACCTCGTCCTCAGCCTGTAACCGCTGCCCTGCAATAGTATCACTTGCCATGTACTTAGAACACTTCGATGTAAATAACTAGGCTAGATAGGTTGTACGGC 208 2785688 0.978281747 15 196 1318 0.947761194 1.626682466 0.063432836 0.221153846 0.395522388 208 9 5 254 3L:2785618-2785738 8 pgant6 FBtr0072973|FBtr0333442|FBtr0072972 2785657|2785657|2785657 2786010|2786010|2786010 GTACTTAG 8mer-m1 dme-miR-252-5p 3L + 2785630 2785741 stop_codon pgant6 FlyBase G20799.1 ACTCGCAGGACCTCGTCCTCAGCCTGTAACCGCTGCCCTGCAATAGTATCACTTGCCATGTACTTAGAACACTTCGATGTAAATAACTAGGCTAGATAGGTTGTACGGCCGC 139 2785688 0.885150218 11 130 817 0.937198068 2.28780173 0.033816425 0.388489209 0.589371981 139 13 0 194 3L:2785630-2785741 8 160 3031 FBgn0035375 484.66 21.71 33.32666667 0.330128337 7.369875633 4.800960192 1 1 1 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3L 2786673 2786678 - 3L_2786673_2786678_- 1 1 1 0 Tet FBtr0309120|FBtr0309118|FBtr0333880|FBtr0309119|FBtr0309117|FBtr0333881 2786205|2786485|2786205|2786485|2786205|2786485 2788549|2788549|2788549|2788549|2788549|2788549 3L - 2786638 2786732 3'utr Tet FlyBase G33823.1 ATATAGATCGTATGTAAACTGTACGTAATGTAATTTAAATGTAAGGCAGCGAAGAAGACTTTTGAGCAACAAGAAAAAACATGTTTTGATAAATA 626 2786671 0.845787536 11 624 2442 0.998644986 2.566437492 0.117886179 0.1536 0.283197832 625 0 1 737 3L:2786638-2786732 6 Tet FBtr0309117|FBtr0333881|FBtr0333880|FBtr0309119|FBtr0309120|FBtr0309118 2786205|2786485|2786205|2786485|2786205|2786485 2788549|2788549|2788549|2788549|2788549|2788549 AAGACT 6mer3-8 dme-miR-14-3p 3L - 2786630 2786733 3'utr Tet FlyBase G25575.2 CATATAGATCGTATGTAAACTGTACGTAATGTAATTTAAATGTAAGGCAGCGAAGAAGACTTTTGAGCAACAAGAAAAAACATGTTTTGATAAATATTTAAATG 449 2786671 0.657389234 13 440 1721 0.986132512 2.204119983 0.110939908 0.325167038 0.533127889 449 6 3 640 3L:2786630-2786733 6 518.5 3032 FBgn0263392 3136.83 38.19 58.6 0.165294262 13.57685258 8.848122867 -7 -7 -7 0.01 dme-miR-980-3p 6mer3-8 GGCAGC 3L 2786872 2786877 - 3L_2786872_2786877_- 1 1 1 0 Tet FBtr0309120|FBtr0309118|FBtr0333880|FBtr0309119|FBtr0309117|FBtr0333881 2786205|2786485|2786205|2786485|2786205|2786485 2788549|2788549|2788549|2788549|2788549|2788549 3L - 2786797 2786955 3'utr Tet FlyBase G33824.1 AATTGTTGTATAAAACTCAATGAATAATTTGCATCCATCCAAAAGGTAACATACAATTAAAGATTAGAATGCAAATGTGGCAGCGCAACTGAATTTCAAATCAAATTAGTCTACATATACATATAAATATATTTTGCACAAAATAAAACAGAAGAGCGG 90 2786879 0.954854973 25 89 417 0.990566038 1.720159303 0.160377358 0.155555556 0.283018868 90 0 1 105 3L:2786797-2786955 6 Tet FBtr0309117|FBtr0333881|FBtr0333880|FBtr0309119|FBtr0309120|FBtr0309118 2786205|2786485|2786205|2786485|2786205|2786485 2788549|2788549|2788549|2788549|2788549|2788549 GGCAGC 6mer3-8 dme-miR-980-3p 3L - 2786849 2786936 3'utr Tet FlyBase G25576.1 ATGAATAATTTGCATCCATCCAAAAGGTAACATACAATTAAAGATTAGAATGCAAATGTGGCAGCGCAACTGAATTTCAAATCAAATT 68 2786879 0.828179218 10 61 289 0.923809524 1.50965048 0.257142857 0.411764706 0.619047619 68 6 2 97 3L:2786849-2786936 6 57.5 3033 FBgn0263392 3136.83 38.19 58.6 0.018330608 1.505629746 0.981228669 2 2 2 0.01 dme-miR-8-3p 7mer-A1 AGTATTA 3L 2787007 2787013 - 3L_2787007_2787013_- 0.823349562 0.823349562 0.823349562 0 Tet FBtr0309120|FBtr0309118|FBtr0333880|FBtr0309119|FBtr0309117|FBtr0333881 2786205|2786485|2786205|2786485|2786205|2786485 2788549|2788549|2788549|2788549|2788549|2788549 3L - 2786963 2787120 3'utr Tet FlyBase G33825.1 TATATTTATTTATGCGCAAATCGACGGCAAATAAGGGGTTTAATTCTAGTTATTATTATTTCTGCAAGATTTAGTTTGAAAAACCCAAAAAGACTCGAAACCAATCAAGTATTAAGCACTAAACAACCAACAACTAATACTAAACTTATTTGCCTAAC 147 2787016 0.977716629 23 139 870 0.950819672 1.763427994 0.092896175 0.19047619 0.349726776 147 7 2 174 3L:2786963-2787120 7 Tet FBtr0309117|FBtr0333881|FBtr0333880|FBtr0309119|FBtr0309120|FBtr0309118 2786205|2786485|2786205|2786485|2786205|2786485 2788549|2788549|2788549|2788549|2788549|2788549 AGTATTA 7mer-A1 dme-miR-8-3p 3L - 2786996 2787111 3'utr Tet FlyBase G25576.3 TTATGCGCAAATCGACGGCAAATAAGGGGTTTAATTCTAGTTATTATTATTTCTGCAAGATTTAGTTTGAAAAACCCAAAAAGACTCGAAACCAATCAAGTATTAAGCACTAAACA 80 2787016 0.942573712 15 64 432 0.831858407 1.371067862 0.123893805 0.35 0.539823009 80 16 3 94 3L:2786996-2787111 7 64.5 3034 FBgn0263392 3136.83 38.19 58.6 0.02056216 1.688923802 1.100682594 3 3 3 0.01 dme-miR-307a-3p 6mer3-8 GGTTGT 3L 2788157 2788162 - 3L_2788157_2788162_- 1 1 1 0 Tet FBtr0309120|FBtr0309118|FBtr0333880|FBtr0309119|FBtr0309117|FBtr0333881 2786205|2786485|2786205|2786485|2786205|2786485 2788549|2788549|2788549|2788549|2788549|2788549 3L - 2788124 2788176 3'utr Tet FlyBase G33833.1 AAACTGAAGAACAGGGTTGTATGACTGAAAATTCACTCAAAGCAAAGAAAAGA 435 2788155 0.95078635 9 390 2256 0.903409091 1.336095698 0.153409091 0.193103448 0.335227273 435 30 21 477 3L:2788124-2788176 6 Tet FBtr0309117|FBtr0333881|FBtr0333880|FBtr0309119|FBtr0309120|FBtr0309118 2786205|2786485|2786205|2786485|2786205|2786485 2788549|2788549|2788549|2788549|2788549|2788549 GGTTGT 6mer3-8 dme-miR-307a-3p 3L - 2788126 2788176 3'utr Tet FlyBase G25582.1 AAACTGAAGAACAGGGTTGTATGACTGAAAATTCACTCAAAGCAAAGAAAA 420 2788155 0.711712695 9 368 2162 0.870716511 1.256050114 0.152647975 0.395238095 0.604361371 420 53 30 559 3L:2788126-2788176 6 416.5 3035 FBgn0263392 3136.83 38.19 58.6 0.132777358 10.90599633 7.107508532 -7 -7 -7 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT 3L 27967276 27967281 - 3L_27967276_27967281_- 1 1 1 0 CG17514 FBtr0113748 27967242 27967330 3L - 27967269 27967317 3'utr CG17514 FlyBase G39637.1 AAATCGTTCCAAAAATATCTTGAACTCTTAAAAAATAGCTGTATTTCAA 28 27967298 0.662083248 9 27 226 0.967741935 1.176091259 0 0.107142857 0.193548387 28 0 1 30 3L:27967269-27967317 6 CG17514 FBtr0113748 27967242 27967330 AGCTGT 6mer3-8 dme-miR-1008-3p 3L - 27967270 27967311 3'utr CG17514 FlyBase G29945.1 TTCCAAAAATATCTTGAACTCTTAAAAAATAGCTGTATTTCA 12 27967298 0.68082953 6 12 85 1 1.204119983 0.0625 0.333333333 0.5 12 0 0 16 3L:27967270-27967311 6 11 3036 FBgn0039959 2964.206667 45.44666667 69.68666667 0.003710942 0.242041954 0.157849421 17 17 17 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3L 304240 304245 + 3L_304240_304245_+ 1 1 1 0 RhoGEF3 FBtr0333956|FBtr0333962|FBtr0333952 303882|303882|303882 304315|305292|305292 3L + 304219 304281 5'utr RhoGEF3 FlyBase G26760.1 ATATAAAAATGTCGCCGACTGCTAGTCTAAAATCCTGTCCATACTTGTAATTTTAGGTTACGT 166 304240 0.784507104 11 162 1013 0.98019802 2.29666519 0.04950495 0.198795181 0.341584158 166 4 0 198 3L:304219-304281 6 RhoGEF3 FBtr0333952|FBtr0333962|FBtr0333956 303882|303882|303882 305292|305292|304315 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3L + 304213 304282 5'utr RhoGEF3 FlyBase G20229.1 AGTTTTATATAAAAATGTCGCCGACTGCTAGTCTAAAATCCTGTCCATACTTGTAATTTTAGGTTACGTG 144 304240 0.764155675 9 138 859 0.966824645 2.309630167 0.037914692 0.347222222 0.55450237 144 7 0 204 3L:304213-304282 6 150 3037 FBgn0264707 2055.463333 66.05 101.8633333 0.072976247 2.271006813 1.472561275 0 0 0 0.01 dme-miR-282-5p 6mer2-7 GAGGCT 3L 3051543 3051548 + 3L_3051543_3051548_+ 1 1 1 0 CG32485 FBtr0072985 3051513 3051765 3L + 3051479 3051637 stop_codon CG32485 FlyBase G27518.1 TACCTCATCCCCGACATCCTGCCAACGGACATGTAAGGCTTCCGCCACGAAATCAGCATCCGACGAGGCTTCTGCTAGGCGTAGACATATCTCCAAAGAGAACCGAAACCAGTACCTAAGTTTGCAAGGAGGCTTCTGAGAGCTTTTATCCAGTATAGT 52 3051513 0.954857614 13 52 241 1 1.770852012 0.338983051 0.134615385 0.237288136 52 0 0 59 3L:3051479-3051637 6 CG32485 FBtr0072985 3051513 3051765 GAGGCT 6mer2-7 dme-miR-282-5p 3L + 3051481 3051642 stop_codon CG32485 FlyBase G20831.1 CCTCATCCCCGACATCCTGCCAACGGACATGTAAGGCTTCCGCCACGAAATCAGCATCCGACGAGGCTTCTGCTAGGCGTAGACATATCTCCAAAGAGAACCGAAACCAGTACCTAAGTTTGCAAGGAGGCTTCTGAGAGCTTTTATCCAGTATAGTACTCT 38 3051549 0.972591559 13 35 211 0.85 1.707570176 0.15 0.447368421 0.65 38 9 0 51 3L:3051481-3051642 6 10.5 3038 FBgn0052485 128.92 14.17333333 21.81 0.081445858 0.740827846 0.481430536 30 -6 12 0.01 dme-miR-1007-3p 6mer2-7 GAGCTT 3L 3051618 3051623 + 3L_3051618_3051623_+ 0.998556133 0.987812061 0.993184097 0.007597155 CG32485 FBtr0072985 3051513 3051765 3L + 3051479 3051637 stop_codon CG32485 FlyBase G27518.1 TACCTCATCCCCGACATCCTGCCAACGGACATGTAAGGCTTCCGCCACGAAATCAGCATCCGACGAGGCTTCTGCTAGGCGTAGACATATCTCCAAAGAGAACCGAAACCAGTACCTAAGTTTGCAAGGAGGCTTCTGAGAGCTTTTATCCAGTATAGT 52 3051614 0.954857614 13 52 241 1 1.770852012 0.338983051 0.134615385 0.237288136 52 0 0 59 3L:3051479-3051637 6 CG32485 FBtr0072985 3051513 3051765 GAGCTT 6mer2-7 dme-miR-1007-3p 3L + 3051481 3051642 stop_codon CG32485 FlyBase G20831.1 CCTCATCCCCGACATCCTGCCAACGGACATGTAAGGCTTCCGCCACGAAATCAGCATCCGACGAGGCTTCTGCTAGGCGTAGACATATCTCCAAAGAGAACCGAAACCAGTACCTAAGTTTGCAAGGAGGCTTCTGAGAGCTTTTATCCAGTATAGTACTCT 38 3051615 0.972591559 13 35 211 0.85 1.707570176 0.15 0.447368421 0.65 38 9 0 51 3L:3051481-3051642 6 15 3039 FBgn0052485 128.92 14.17333333 21.81 0.116351226 1.058325494 0.687757909 4 3 3.5 0.01 dme-miR-305-5p 8mer-m1 AGTACAAT 3L 3051708 3051715 + 3L_3051708_3051715_+ 0.570363044 0.570363044 0.570363044 0 CG32485 FBtr0072985 3051513 3051765 3L + 3051646 3051720 3'utr CG32485 FlyBase G27519.1 TGTAAATCGATGTGTTTAACAAGTTGATTGTAAAGCGTATTCTATTGGACACCACAACTATTAGTACAATGCTAA 34 3051706 0.982885938 8 30 229 0.875 1.243038049 0.05 0.147058824 0.275 34 4 1 35 3L:3051646-3051720 8 CG32485 FBtr0072985 3051513 3051765 AGTACAAT 8mer-m1 dme-miR-305-5p 3L + 3051679 3051719 3'utr CG32485 FlyBase G20832.1 AGCGTATTCTATTGGACACCACAACTATTAGTACAATGCTA 14 3051706 0.674387683 5 14 88 1 1.397940009 0 0.5 0.72 14 0 0 25 3L:3051679-3051719 8 20 3040 FBgn0052485 128.92 14.17333333 21.81 0.155134967 1.411100659 0.917010546 2 2 2 0.01 dme-miR-33-5p 7mer-A1 AATGCAA 3L 3056074 3056080 - 3L_3056074_3056080_- 0.782911824 0.782911824 0.782911824 0 CG32486 FBtr0073004 3055906 3056724 3L - 3056047 3056096 3'utr CG32486 FlyBase G33918.2 ATAGCCCGGGCCGTAAAATGCAAAGATCCCCCCAAAAGTCCTCACGTTCG 25 3056070 0.965915948 4 24 62 1 1.431363764 0.074074074 0.08 0.148148148 25 0 0 27 3L:3056047-3056096 7 CG32486 FBtr0073004 3055906 3056724 AATGCAA 7mer-A1 dme-miR-33-5p 3L - 3056046 3056145 3'utr CG32486 FlyBase G25646.1 ATATAGAACGCTCTATGATATAACGTAGCGATAGACTAACTACGATCACATAGCCCGGGCCGTAAAATGCAAAGATCCCCCCAAAAGTCCTCACGTTCGA 23 3056070 0.996859188 6 23 67 1 1.544068044 0.142857143 0.347826087 0.571428571 23 0 0 35 3L:3056046-3056145 7 19 3041 FBgn0266918 501.6666667 25.67666667 39.09333333 0.037873754 0.73997144 0.486016371 -10 -10 -10 0.01 dme-bantam-3p 8mer-A1 TGATCTCA 3L 3056302 3056309 - 3L_3056302_3056309_- 0.631136385 0.631136385 0.631136385 0 CG32486 FBtr0073004 3055906 3056724 3L - 3056250 3056499 3'utr CG32486 FlyBase G33920.1 GCAGACGTAACGCGGTAGGTTGTAACCTAAGTTTAGTGTAGATTCGGCTACATTTTGTACATGAGATGAGATAGCGCCATTTTATGGAGACACCTTTCAATAGCTATGTTAACTCTACTGTTAGTGCTGGTGGCGAAATGGATACGATACGATGGACAAGACGACTGATGTGTGTTTGACTAGCGTTTAATGATCTCACAGGAAGGAGCCAGCCCACGCTAACGCGATAATACCGATAATAACCATAAAA 543 3056309 0.820477851 36 523 3349 0.963549921 2.005752329 0.272583201 0.136279926 0.256735341 543 18 5 608 3L:3056250-3056499 8 CG32486 FBtr0073004 3055906 3056724 TGATCTCA 8mer-A1 dme-bantam-3p 3L - 3056260 3056469 3'utr CG32486 FlyBase G25647.1 GTTTAGTGTAGATTCGGCTACATTTTGTACATGAGATGAGATAGCGCCATTTTATGGAGACACCTTTCAATAGCTATGTTAACTCTACTGTTAGTGCTGGTGGCGAAATGGATACGATACGATGGACAAGACGACTGATGTGTGTTTGACTAGCGTTTAATGATCTCACAGGAAGGAGCCAGCCCACGCTAACGCGATAATACCGATAAT 344 3056309 0.976287521 32 326 2093 0.955637708 1.868392503 0.210720887 0.398255814 0.617375231 344 18 6 517 3L:3056260-3056469 8 365 3042 FBgn0266918 501.6666667 25.67666667 39.09333333 0.727574751 14.21524082 9.336630286 0 0 0 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 3L 3056653 3056658 - 3L_3056653_3056658_- 1 1 1 0 CG32486 FBtr0073004 3055906 3056724 3L - 3056632 3056745 stop_codon CG32486 FlyBase G33921.2 ATGTTTCTGCTGAACAAGTAGACGCTTTCGCTGCTCAGCGAACTAAGATTTTCAAATTAGCTTAAGTTTGTTGTTTCAAACTCTTGAATGTGCAAAACCTAGATATAGTTGACT 148 3056661 0.973119223 18 134 1056 0.920731707 1.701855693 0.231707317 0.101351351 0.18902439 148 11 2 151 3L:3056632-3056745 6 CG32486 FBtr0073004 3055906 3056724 ATGTGC 6mer3-8 dme-miR-305-3p 3L - 3056633 3056701 3'utr CG32486 FlyBase G25649.1 AAGATTTTCAAATTAGCTTAAGTTTGTTGTTTCAAACTCTTGAATGTGCAAAACCTAGATATAGTTGAC 58 3056660 0.804554754 6 40 444 0.677777778 1.183269844 0.266666667 0.379310345 0.6 58 26 3 61 3L:3056633-3056701 6 61 3043 FBgn0266918 501.6666667 25.67666667 39.09333333 0.121594684 2.37569778 1.560368349 3 2 2.5 0.01 dme-miR-252-5p 6mer3-8 GTACTT 3L 305714 305719 - 3L_305714_305719_- 0.99999937 1 0.999999685 4.24E-07 fwd FBtr0072516 305391 306358 3L - 305697 305751 3'utr fwd FlyBase G32951.1 TTGAAATGTTTGAGTCGCTGTCCGCTGTGTTTGTACTTGCATATTTAACTAAGTA 33 305721 0.654926989 11 30 320 0.911111111 1.010723865 0.355555556 0.303030303 0.488888889 33 1 3 41 3L:305697-305751 6 fwd FBtr0072516 305391 306358 GTACTT 6mer3-8 dme-miR-252-5p 3L - 305677 305741 3'utr fwd FlyBase G24938.1 TGAGTCGCTGTCCGCTGTGTTTGTACTTGCATATTTAACTAAGTAAACGAAAAAATAAATCCCAA 22 305721 0.986996608 5 20 173 0.942857143 1.51851394 0.485714286 0.409090909 0.628571429 22 2 0 33 3L:305677-305741 6 23.5 3044 FBgn0004373 1952.316667 35.47333333 54.29333333 0.012036982 0.662469461 0.432833988 2 2 2 0.01 dme-miR-12-5p 6mer3-8 AATACT 3L 305847 305852 - 3L_305847_305852_- 1 1 1 0 fwd FBtr0072516 305391 306358 3L - 305826 305899 3'utr fwd FlyBase G32952.1 AAGCATCTAATTCCAATATATAGTCATAAGTATAAGGGTATATGCTTAATACTGCTGCAGCATAGAATTTTAAT 11 305882 0.990233923 6 9 94 0.846153846 1.041392685 0 0.181818182 0.307692308 11 2 0 11 3L:305826-305899 6 fwd FBtr0072516 305391 306358 AATACT 6mer3-8 dme-miR-12-5p 3L - 305817 305899 3'utr fwd FlyBase G24939.1 AAGCATCTAATTCCAATATATAGTCATAAGTATAAGGGTATATGCTTAATACTGCTGCAGCATAGAATTTTAATACAGCAATA 15 305851 0.982190485 9 14 109 1 1.322219295 0 0.4 0.571428571 15 0 0 21 3L:305817-305899 6 5.5 3045 FBgn0004373 1952.316667 35.47333333 54.29333333 0.002817166 0.155046044 0.101301572 30 -1 14.5 0.01 dme-miR-1003-3p 7mer-A1 TGTGAGA 3L 306060 306066 - 3L_306060_306066_- 0.598382561 0.598382561 0.598382561 0 fwd FBtr0072516 305391 306358 3L - 306000 306106 3'utr fwd FlyBase G32954.1 AAGAGAAAAGTGTAAATGCCGAGTGTAATTTTAGTTTGCCTGTGAGAGATCGCGAGACACTCGCTATTCCATTTTGAAATTCATAATTTACATGTACATTTGTGCAC 31 306090 0.98726957 7 28 243 0.885714286 0.792391689 0.114285714 0.129032258 0.228571429 31 0 4 31 3L:306000-306106 7 fwd FBtr0072516 305391 306358 TGTGAGA 7mer-A1 dme-miR-1003-3p 3L - 306042 306099 3'utr fwd FlyBase G24941.1 AAGTGTAAATGCCGAGTGTAATTTTAGTTTGCCTGTGAGAGATCGCGAGACACTCGCT 20 306065 0.82699994 8 17 160 0.884615385 1.06069784 0.192307692 0.25 0.423076923 20 2 1 23 3L:306042-306099 7 14.5 3046 FBgn0004373 1952.316667 35.47333333 54.29333333 0.007427074 0.408757752 0.26706778 24 -1 11.5 0.01 dme-miR-980-3p 6mer2-7 GCAGCT 3L 3088338 3088343 + 3L_3088338_3088343_+ 1 1 1 0 CG11486 FBtr0072995|FBtr0113131|FBtr0072991|FBtr0073001|FBtr0073003|FBtr0072992|FBtr0332113|FBtr0072996|FBtr0073000|FBtr0072993|FBtr0113129|FBtr0073002|FBtr0072999|FBtr0072998|FBtr0113130|FBtr0072994 3088301|3088301|3088301|3088301|3088301|3088301|3088301|3088301|3088301|3088301|3088301|3088301|3088301|3088301|3088301|3088301 3088493|3088634|3088634|3088634|3088634|3088634|3090406|3088634|3090406|3088634|3088634|3088634|3088634|3090406|3088634|3090406 3L + 3088327 3088428 3'utr CG11486 FlyBase G27538.1 AGAAAACACGCGCAGCTCACTTAGCCACCATCCGCACGACCACAAAACGACTACGATAAAGGATTAGATACTAAGCAAAACATTCATTACGACTAAGACATT 21 3088347 0.934398581 6 19 75 0.958333333 1.361727836 0.125 0.142857143 0.25 21 1 0 23 3L:3088327-3088428 6 CG11486 FBtr0332113|FBtr0072994|FBtr0072998|FBtr0073003|FBtr0072991|FBtr0073001|FBtr0113129|FBtr0072995|FBtr0073000|FBtr0113131|FBtr0072996|FBtr0113130|FBtr0072999|FBtr0072992|FBtr0073002|FBtr0072993 3088301|3088301|3088301|3088301|3088301|3088301|3088301|3088301|3088301|3088301|3088301|3088301|3088301|3088301|3088301|3088301 3090406|3090406|3090406|3088634|3088634|3088634|3088634|3088493|3090406|3088634|3088634|3088634|3088634|3088634|3088634|3088634 GCAGCT 6mer2-7 dme-miR-980-3p 3L + 3088329 3088366 3'utr CG11486 FlyBase G20850.1 AAAACACGCGCAGCTCACTTAGCCACCATCCGCACGAC 5 3088347 0.867521093 2 5 13 1 0.84509804 0 0.2 0.428571429 5 0 0 7 3L:3088329-3088366 6 9 3047 FBgn0035397 2018.183333 59.24333333 91.30666667 0.004459456 0.151915827 0.098568925 -9 -9 -9 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 3L 3090163 3090168 + 3L_3090163_3090168_+ 1 1 1 0 CG11486 FBtr0332113|FBtr0332113|FBtr0073000|FBtr0073000|FBtr0072998|FBtr0072998|FBtr0072994|FBtr0072994 3088301|3088301|3088301|3088301|3088301|3088301|3088301|3088301 3090406|3090406|3090406|3090406|3090406|3090406|3090406|3090406 3L + 3090128 3090173 3'utr CG11486 FlyBase G27541.1 AGTAGATGGTTCGTTTACCAGCTTAGTGTGATTTATACTTATTTTG 23 3090160 0.719582455 4 23 224 1 1.505149978 0.03125 0.217391304 0.4375 23 0 0 32 3L:3090128-3090173 6 CG11486 FBtr0332113|FBtr0332113|FBtr0072994|FBtr0072994|FBtr0072998|FBtr0072998|FBtr0073000|FBtr0073000 3088301|3088301|3088301|3088301|3088301|3088301|3088301|3088301 3090406|3090406|3090406|3090406|3090406|3090406|3090406|3090406 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 3L + 3090128 3090169 3'utr CG11486 FlyBase G20854.1 AGTAGATGGTTCGTTTACCAGCTTAGTGTGATTTATACTTAT 26 3090160 0.73747605 3 26 243 1 1.568201724 0 0.230769231 0.459459459 26 0 0 37 3L:3090128-3090169 6 21 3048 FBgn0035397 2018.183333 59.24333333 91.30666667 0.010405398 0.354470264 0.229994159 3 3 3 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3L 3090350 3090355 + 3L_3090350_3090355_+ 1 1 1 0 CG11486 FBtr0332113|FBtr0073000|FBtr0072998|FBtr0072994 3088301|3088301|3088301|3088301 3090406|3090406|3090406|3090406 3L + 3090328 3090370 3'utr CG11486 FlyBase G27542.1 AAATTATTGTGTACATCAACGTAAGACTAATTATTTAATTGAA 11 3090349 0.836169669 5 10 83 0.909090909 1 0.181818182 0 0 11 1 0 10 3L:3090328-3090370 6 CG11486 FBtr0332113|FBtr0072994|FBtr0072998|FBtr0073000 3088301|3088301|3088301|3088301 3090406|3090406|3090406|3090406 AAGACT 6mer3-8 dme-miR-14-3p 3L + 3090328 3090366 3'utr CG11486 FlyBase G20855.1 AAATTATTGTGTACATCAACGTAAGACTAATTATTTAAT 9 3090349 0.849205586 3 8 75 0.857142857 1.079181246 0 0.555555556 0.714285714 9 2 0 12 3L:3090328-3090366 6 9.5 3049 FBgn0035397 2018.183333 59.24333333 91.30666667 0.004707204 0.160355596 0.104044977 1 1 1 0.01 dme-miR-33-5p 7mer-m8 CAATGCA 3L 3115152 3115158 - 3L_3115152_3115158_- 0.67410031 0.658640418 0.666370364 0.0109318 prominin-like FBtr0073118|FBtr0306258 3114557|3114448 3115919|3115919 3L - 3115130 3115229 3'utr prominin-like FlyBase G33926.1 AAATATGATCCAAAATACCAAAACTGCCATTTTAATTTAGAAAAGAGCAGAGCACAGAGTTGGGAGTTATTCAATGCATTTAATGTATTTATTTTAGAAA 41 3115159 0.755576246 14 38 341 0.933333333 1.322219295 0.244444444 0.097560976 0.177777778 41 2 1 42 3L:3115130-3115229 7 prominin-like FBtr0306258|FBtr0073118 3114448|3114557 3115919|3115919 CAATGCA 7mer-m8 dme-miR-33-5p 3L - 3115138 3115224 3'utr prominin-like FlyBase G25655.1 TGATCCAAAATACCAAAACTGCCATTTTAATTTAGAAAAGAGCAGAGCACAGAGTTGGGAGTTATTCAATGCATTTAATGTATTTAT 23 3115159 0.860197531 9 23 182 1 1.579783597 0.289473684 0.391304348 0.631578947 23 0 0 38 3L:3115138-3115224 7 15.5 3050 FBgn0026189 6878.313333 173.88 267.93 0.002253459 0.089141937 0.057850931 1 1 1 0.01 dme-miR-79-3p 7mer-A1 AGCTTTA 3L 3115409 3115415 - 3L_3115409_3115415_- 0.823349562 0.823349562 0.823349562 0 prominin-like FBtr0073118|FBtr0073120|FBtr0306258|FBtr0337056|FBtr0073119 3114557|3115333|3114448|3115333|3115333 3115919|3115919|3115919|3115919|3115919 3L - 3115381 3115465 3'utr prominin-like FlyBase G33927.1 GATGAGTCCCTTGAAGAAGTTGGCCATTCGCCGGGTCGCACGGCCGCAGAAGCTTTAAGGAATCTCATAATTTTATTATGCACAC 34 3115398 0.814270906 11 30 220 0.886363636 1.591064607 0.454545455 0.205882353 0.386363636 34 5 0 39 3L:3115381-3115465 7 prominin-like FBtr0073119|FBtr0337056|FBtr0306258|FBtr0073120|FBtr0073118 3115333|3115333|3114448|3115333|3114557 3115919|3115919|3115919|3115919|3115919 AGCTTTA 7mer-A1 dme-miR-79-3p 3L - 3115349 3115445 3'utr prominin-like FlyBase G25656.1 TGGCCATTCGCCGGGTCGCACGGCCGCAGAAGCTTTAAGGAATCTCATAATTTTATTATGCACACACTCAGAGCAGGCGAGACATACCCAAAAAGGA 28 3115398 0.973783479 9 24 149 0.880952381 1.568201724 0.285714286 0.357142857 0.571428571 28 5 0 37 3L:3115349-3115445 7 17.5 3051 FBgn0026189 6878.313333 173.88 267.93 0.002544228 0.100644122 0.065315567 -17 -17 -17 0.01 dme-miR-190-5p 6mer3-8 ACATAT 3L 3154123 3154128 + 3L_3154123_3154128_+ 1 1 1 0 BtbVII FBtr0330148|FBtr0307305|FBtr0307301|FBtr0307302|FBtr0330149|FBtr0332096|FBtr0307304 3153751|3153532|3153532|3153532|3153532|3153532|3153532 3154225|3154934|3154225|3154934|3154225|3154934|3155678 3L + 3154090 3154135 3'utr BtbVII FlyBase G27567.1 AAGAAATCGGTAGTGCAGATCTTCGATATACATACATATATATATA 23 3154116 0.787515825 4 21 200 0.92 1.361727836 0 0.086956522 0.16 23 2 0 23 3L:3154090-3154135 6 BtbVII FBtr0332096|FBtr0307304|FBtr0307302|FBtr0330149|FBtr0307301|FBtr0330148|FBtr0307305 3153532|3153532|3153532|3153532|3153532|3153751|3153532 3154934|3155678|3154934|3154225|3154225|3154225|3154934 ACATAT 6mer3-8 dme-miR-190-5p 3L + 3154090 3154133 3'utr BtbVII FlyBase G20873.1 AAGAAATCGGTAGTGCAGATCTTCGATATACATACATATATATA 15 3154115 0.673029749 6 13 100 0.92 1.06069784 0 0.466666667 0.68 15 1 1 23 3L:3154090-3154133 6 14 3052 FBgn0263108 1294.493333 34.92 53.58666667 0.010815042 0.40091638 0.26125902 7 8 7.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 3154343 3154348 + 3L_3154343_3154348_+ 1 1 1 0 BtbVII FBtr0307305|FBtr0307302|FBtr0332096|FBtr0307304 3153532|3153532|3153532|3153532 3154934|3154934|3154934|3155678 3L + 3154319 3154462 3'utr BtbVII FlyBase G27569.1 TAATGCAAGCAAGCAATGGACTAAACCAAAAATTCTATCTGTAATCGTAATGATAAACATTAAGGACAAAATGAGATTTATTGGCAATTTCTGGCGAAAATTTCCCACATCCTGCGGTTTGCTAGGCTCTGGCGCATCAGAAAT 197 3154335 0.980724368 16 195 726 0.987068966 2.359835482 0.142241379 0.131979695 0.262931034 197 3 0 229 3L:3154319-3154462 6 BtbVII FBtr0332096|FBtr0307304|FBtr0307302|FBtr0307305 3153532|3153532|3153532|3153532 3154934|3155678|3154934|3154934 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 3154313 3154407 3'utr BtbVII FlyBase G20875.1 TTTTTGTAATGCAAGCAAGCAATGGACTAAACCAAAAATTCTATCTGTAATCGTAATGATAAACATTAAGGACAAAATGAGATTTATTGGCAATT 137 3154335 0.967595337 11 137 460 1 2.346352974 0.094594595 0.445255474 0.657657658 137 0 0 222 3L:3154313-3154407 6 94.5 3053 FBgn0263108 1294.493333 34.92 53.58666667 0.073001535 2.706185567 1.763498383 8 8 8 0.01 dme-miR-304-5p 7mer-m8 TGAGATT 3L 3154390 3154396 + 3L_3154390_3154396_+ 0.620203442 0.620203442 0.620203442 0 BtbVII FBtr0307305|FBtr0307302|FBtr0332096|FBtr0307304 3153532|3153532|3153532|3153532 3154934|3154934|3154934|3155678 3L + 3154319 3154462 3'utr BtbVII FlyBase G27569.1 TAATGCAAGCAAGCAATGGACTAAACCAAAAATTCTATCTGTAATCGTAATGATAAACATTAAGGACAAAATGAGATTTATTGGCAATTTCTGGCGAAAATTTCCCACATCCTGCGGTTTGCTAGGCTCTGGCGCATCAGAAAT 197 3154390 0.980724368 16 195 726 0.987068966 2.359835482 0.142241379 0.131979695 0.262931034 197 3 0 229 3L:3154319-3154462 7 BtbVII FBtr0332096|FBtr0307304|FBtr0307302|FBtr0307305 3153532|3153532|3153532|3153532 3154934|3155678|3154934|3154934 TGAGATT 7mer-m8 dme-miR-304-5p 3L + 3154313 3154407 3'utr BtbVII FlyBase G20875.1 TTTTTGTAATGCAAGCAAGCAATGGACTAAACCAAAAATTCTATCTGTAATCGTAATGATAAACATTAAGGACAAAATGAGATTTATTGGCAATT 137 3154390 0.967595337 11 137 460 1 2.346352974 0.094594595 0.445255474 0.657657658 137 0 0 222 3L:3154313-3154407 7 66 3054 FBgn0263108 1294.493333 34.92 53.58666667 0.050985199 1.890034364 1.231649664 0 0 0 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 3161865 3161870 + 3L_3161865_3161870_+ 1 1 1 0 pfk FBtr0073028|FBtr0073027 3161723|3161723 3162019|3162019 3L + 3161832 3161930 3'utr pfk FlyBase G27592.1 ATGTACATCAACCATATCCTATCTCCTGATGAAACCAAAATTGAGTCCGGAAGAGCAGCAAGAGATGCTATTCTAGAGGTAGTTTTGTAGACTTAGTTC 28 3161873 0.943897244 8 28 121 1 1.477121255 0.3 0.071428571 0.133333333 28 0 0 30 3L:3161832-3161930 6 pfk FBtr0073028|FBtr0073027 3161723|3161723 3162019|3162019 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 3161801 3161907 3'utr pfk FlyBase G20885.1 AGGGTTTAACTTCATGTTGTCCCATCAGTGTATGTACATCAACCATATCCTATCTCCTGATGAAACCAAAATTGAGTCCGGAAGAGCAGCAAGAGATGCTATTCTAG 11 3161873 0.91851142 6 11 47 1 1.204119983 0.375 0.363636364 0.5625 11 0 0 16 3L:3161801-3161907 6 12.5 3055 FBgn0035405 277.3633333 17.59666667 26.86333333 0.04506724 0.710361811 0.465318278 -8 -8 -8 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 3L 3184710 3184716 + 3L_3184710_3184716_+ 0.620204266 0.620204266 0.620204266 0 Girdin FBtr0332097|FBtr0073036|FBtr0332098|FBtr0332099|FBtr0073035 3184665|3184270|3184270|3184665|3184665 3185287|3185287|3185287|3185287|3185287 3L + 3184695 3184737 3'utr Girdin FlyBase G27615.1 TGAACTCGAACATAATGCATTTGCTGACGAAGTATTATTTCGT 56 3184712 0.665012073 9 54 359 0.953125 1.785329835 0.28125 0.125 0.234375 56 3 0 61 3L:3184695-3184737 7 Girdin FBtr0073035|FBtr0332098|FBtr0332099|FBtr0332097|FBtr0073036 3184665|3184270|3184665|3184665|3184270 3185287|3185287|3185287|3185287|3185287 TGCATTT 7mer-m8 dme-miR-277-3p 3L + 3184695 3184746 3'utr Girdin FlyBase G20901.1 TGAACTCGAACATAATGCATTTGCTGACGAAGTATTATTTCGTTTTAGAAAT 51 3184714 0.647639022 7 49 329 0.957746479 1.832508913 0.197183099 0.294117647 0.492957746 51 3 0 68 3L:3184695-3184746 7 52 3056 FBgn0035411 1033.61 24.37 37.36 0.050309111 2.13377103 1.391862955 -2 -4 -3 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT 3L 3185009 3185014 + 3L_3185009_3185014_+ 1 1 1 0 Girdin FBtr0332097|FBtr0073036|FBtr0332098|FBtr0332099|FBtr0073035 3184665|3184270|3184270|3184665|3184665 3185287|3185287|3185287|3185287|3185287 3L + 3185000 3185076 3'utr Girdin FlyBase G27616.1 TTAAATATTAGCTGTACCGGCCTCAATGTACGTCCTAAGCGAAAGGCTTTCTTTTTCGCAGATAAGACAAGATATTT 67 3185026 0.955857321 7 64 356 0.975 1.414973348 0.4125 0.149253731 0.2875 67 0 2 78 3L:3185000-3185076 6 Girdin FBtr0073035|FBtr0332098|FBtr0332099|FBtr0332097|FBtr0073036 3184665|3184270|3184665|3184665|3184270 3185287|3185287|3185287|3185287|3185287 AGCTGT 6mer3-8 dme-miR-1008-3p 3L + 3185004 3185075 3'utr Girdin FlyBase G20903.1 ATATTAGCTGTACCGGCCTCAATGTACGTCCTAAGCGAAAGGCTTTCTTTTTCGCAGATAAGACAAGATATT 48 3185026 0.768932489 9 46 237 0.962962963 1.892094603 0.395061728 0.4375 0.666666667 48 3 0 78 3L:3185004-3185075 6 24.5 3057 FBgn0035411 1033.61 24.37 37.36 0.023703331 1.005334428 0.655781585 -17 -17 -17 0.01 dme-miR-92b-3p 7mer-m1 TGCAATT 3L 3198044 3198050 - 3L_3198044_3198050_- 0.765586663 0.765586663 0.765586663 0 CG32276 FBtr0073107|FBtr0073106 3197861|3197861 3198320|3198320 3L - 3197946 3198111 3'utr CG32276 FlyBase G33982.1 AAGTCCATTTAAAGCATTTTGCATTAATTGATTTAACTGTAAGCTCTGCAATGTGCATTCCTGCAATTCTCTCCTAAGCAACTGAATAATGATCCCCGATCATTTATAGGCGATAAATGCATTTTTAAGATGCTTCTCGGCGCAGTTTTAAATAGTGCAAAGTGTT 51 3198054 0.983207724 16 51 389 1 1.785329835 0.049180328 0.156862745 0.295081967 51 0 0 61 3L:3197946-3198111 7 CG32276 FBtr0073106|FBtr0073107 3197861|3197861 3198320|3198320 TGCAATT 7mer-m1 dme-miR-92b-3p 3L - 3197871 3198100 3'utr CG32276 FlyBase G25695.1 AAGCATTTTGCATTAATTGATTTAACTGTAAGCTCTGCAATGTGCATTCCTGCAATTCTCTCCTAAGCAACTGAATAATGATCCCCGATCATTTATAGGCGATAAATGCATTTTTAAGATGCTTCTCGGCGCAGTTTTAAATAGTGCAAAGTGTTAAAGCGTTGTTTTCTAATGCAAAGACGAGTAGAGAAGAAACTATGAGTACATAACAATGATGAATATATGATAAT 52 3198025 0.983662081 24 48 357 0.938271605 1.880813592 0.12345679 0.384615385 0.604938272 52 5 0 76 3L:3197871-3198100 7 20.5 3058 FBgn0047135 1536 262.94 398.89 0.013346354 0.077964555 0.051392615 4 -25 -10.5 0.01 dme-miR-92b-3p 7mer-A1 TGCAATA 3L 3198141 3198147 - 3L_3198141_3198147_- 0.782829457 0.782911824 0.782870641 5.82E-05 CG32276 FBtr0073107|FBtr0073106 3197861|3197861 3198320|3198320 3L - 3198132 3198423 stop_codon CG32276 FlyBase G33983.1 AGAGGGTCAATATCCGGTGGGTCCCTGGCTCCTGGCGCTGTTCATCTTTGTGGTCTGCGGCTCTGCCATTTTCCAGATTGTTCAGTCGATACGCGCCGCGTAAGGAAAGGCTTCACCTCGCATAAGATACACAGAGAGCAGGTGCATCTGGAGGAAGATAATAGACCTTTCCGGAACCTTCACTTGCTACTACTAACACCTTCCCTAGCTTAATAGTCCCCGGCAACATGTGCAACCAGAGGATGACCCCAAACAACTTGGCTTTATTATCGTTTCTGCAATATCAACTCCT 327 3198165 0.958822692 49 308 2367 0.9375 1.857332496 0.203125 0.143730887 0.270833333 327 20 4 360 3L:3198132-3198423 7 CG32276 FBtr0073106|FBtr0073107 3197861|3197861 3198320|3198320 TGCAATA 7mer-A1 dme-miR-92b-3p 3L - 3198135 3198190 3'utr CG32276 FlyBase G25696.1 AACCAGAGGATGACCCCAAACAACTTGGCTTTATTATCGTTTCTGCAATATCAACT 99 3198165 0.833790383 12 98 765 0.993377483 2.176091259 0.17218543 0.393939394 0.602649007 99 1 0 150 3L:3198135-3198190 7 28.5 3059 FBgn0047135 1536 262.94 398.89 0.018554688 0.108389747 0.071448269 18 18 18 0.01 dme-miR-283-5p 6mer3-8 TGATAT 3L 3211003 3211008 + 3L_3211003_3211008_+ 1 1 1 0 gry FBtr0073042 3210992 3211348 3L + 3210983 3211031 stop_codon gry FlyBase G27647.1 AGAACAAGTAGGGATGATACTGATATAATGCCGCTTTAGTTTAAGTGTT 20 3211012 0.749163617 9 20 165 1 1.397940009 0.4 0.2 0.36 20 0 0 25 3L:3210983-3211031 6 gry FBtr0073042 3210992 3211348 TGATAT 6mer3-8 dme-miR-283-5p 3L + 3210970 3211029 stop_codon gry FlyBase G20931.1 CCTCTGAAGCAACAGAACAAGTAGGGATGATACTGATATAATGCCGCTTTAGTTTAAGTG 10 3211017 0.977659883 5 10 68 1 1.176091259 0.533333333 0.3 0.533333333 10 0 0 15 3L:3210970-3211029 6 12.5 3060 FBgn0035416 1009.253333 26.48 40.54 0.012385394 0.472054381 0.308337444 -9 -14 -11.5 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3L 3211167 3211173 + 3L_3211167_3211173_+ 0.521223855 0.521223855 0.521223855 0 gry FBtr0073042 3210992 3211348 3L + 3211110 3211287 3'utr gry FlyBase G27649.1 ACATACATAAATAACTATATATTTAGAGAGTTGCATAGCGTAATACTTGAGAGTGTGTGTGATTGTATTGTATAATGTATTGTTAAATGGGCCAAGACGCACTAGACATTATTGTTAGTTGATTACGGCGTTTTAGATAAGCAGTGCTAAGTCCTGGTCAGTACCGCAAGTTGCACAT 70 3211173 0.93764961 24 66 608 0.956521739 1.467361417 0.27173913 0.2 0.391304348 70 2 2 88 3L:3211110-3211287 7 gry FBtr0073042 3210992 3211348 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 3211128 3211277 3'utr gry FlyBase G20932.1 ATATTTAGAGAGTTGCATAGCGTAATACTTGAGAGTGTGTGTGATTGTATTGTATAATGTATTGTTAAATGGGCCAAGACGCACTAGACATTATTGTTAGTTGATTACGGCGTTTTAGATAAGCAGTGCTAAGTCCTGGTCAGTACCGCA 44 3211165 0.990940311 16 38 397 0.903225806 1.271066772 0.322580645 0.318181818 0.516129032 44 4 2 56 3L:3211128-3211277 7 38.5 3061 FBgn0035416 1009.253333 26.48 40.54 0.038147013 1.453927492 0.949679329 -6 2 -2 0.01 dme-bantam-3p 6mer3-8 TGATCT 3L 3220818 3220823 + 3L_3220818_3220823_+ 1 1 1 0 CG12034 FBtr0073043 3220717 3220925 3L + 3220737 3220910 3'utr CG12034 FlyBase G27653.1 AGCTCAATGCGCATTTAAAATCCACGTGTAGCGTACTATAAGCAGCGATATATGTTTGACTAGAGTTATAGCGCTCTTACTTGATCTTTTTATTCGTGTAACCGTCAATGCAATTCCATGGTCTCTTTCTGTGTAACGTCATCCATATCCCAGGAATAATAGTTCAATAAAAGT 265 3220818 0.935713125 28 257 2399 0.973214286 2.037426498 0.044642857 0.222641509 0.386904762 265 7 2 327 3L:3220737-3220910 6 CG12034 FBtr0073043 3220717 3220925 TGATCT 6mer3-8 dme-bantam-3p 3L + 3220776 3220910 3'utr CG12034 FlyBase G20935.1 AAGCAGCGATATATGTTTGACTAGAGTTATAGCGCTCTTACTTGATCTTTTTATTCGTGTAACCGTCAATGCAATTCCATGGTCTCTTTCTGTGTAACGTCATCCATATCCCAGGAATAATAGTTCAATAAAAGT 153 3220818 0.735813767 25 152 1316 0.995744681 2.369215857 0.093617021 0.405228758 0.612765957 153 1 0 234 3L:3220776-3220910 6 61.5 3062 FBgn0035421 132.3333333 9.493333333 14.43 0.464735516 6.478230337 4.261954262 0 0 0 0.01 dme-miR-92b-3p 7mer-m1 TGCAATT 3L 3220845 3220851 + 3L_3220845_3220851_+ 0.671552015 0.391612373 0.531582194 0.197947189 CG12034 FBtr0073043 3220717 3220925 3L + 3220737 3220910 3'utr CG12034 FlyBase G27653.1 AGCTCAATGCGCATTTAAAATCCACGTGTAGCGTACTATAAGCAGCGATATATGTTTGACTAGAGTTATAGCGCTCTTACTTGATCTTTTTATTCGTGTAACCGTCAATGCAATTCCATGGTCTCTTTCTGTGTAACGTCATCCATATCCCAGGAATAATAGTTCAATAAAAGT 265 3220854 0.935713125 28 257 2399 0.973214286 2.037426498 0.044642857 0.222641509 0.386904762 265 7 2 327 3L:3220737-3220910 7 CG12034 FBtr0073043 3220717 3220925 TGCAATT 7mer-m1 dme-miR-92b-3p 3L + 3220776 3220910 3'utr CG12034 FlyBase G20935.1 AAGCAGCGATATATGTTTGACTAGAGTTATAGCGCTCTTACTTGATCTTTTTATTCGTGTAACCGTCAATGCAATTCCATGGTCTCTTTCTGTGTAACGTCATCCATATCCCAGGAATAATAGTTCAATAAAAGT 153 3220854 0.735813767 25 152 1316 0.995744681 2.369215857 0.093617021 0.405228758 0.612765957 153 1 0 234 3L:3220776-3220910 7 127.5 3063 FBgn0035421 132.3333333 9.493333333 14.43 0.963476071 13.43047753 8.835758836 -9 -9 -9 0.01 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3L 3232405 3232410 + 3L_3232405_3232410_+ 1 1.000000001 1 0 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3232295 3232433 intron-3'utr CG11505 FlyBase G27688.1 CAGCAGTTGCCGCTGCTCGTTAGGACGCGGAAACGAGAGCAGAGGAAGGAGAGAGCAGCAGGCGATGCTTGGACCAGTTATCATATTAGTAGGCAACGACGAAGAATGAATGGTGCATACCCTTTCTCCAGCTATATTT 222 3232405 0.965250586 14 216 1141 0.974074074 2.419955748 0.096296296 0.175675676 0.322222222 222 7 0 263 3L:3232295-3232433 6 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3L + 3232333 3232429 3'utr CG11505 FlyBase G20959.1 GCAGAGGAAGGAGAGAGCAGCAGGCGATGCTTGGACCAGTTATCATATTAGTAGGCAACGACGAAGAATGAATGGTGCATACCCTTTCTCCAGCTAT 140 3232405 0.961632127 10 138 688 0.990909091 2.338456494 0.127272727 0.392857143 0.613636364 140 2 0 218 3L:3232333-3232429 6 160.5 3064 FBgn0035424 4177.206667 52.67666667 80.83333333 0.038422806 3.046889831 1.98556701 0 0 0 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3L 3232919 3232924 + 3L_3232919_3232924_+ 0.999999999 1 1 0 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3232828 3232959 3'utr CG11505 FlyBase G27690.2 CTCATTTTTGCTTACACATCAGAACGTAATGTTTATAGCCAAAACAGAAGTACACAGATAAGAGTGCGTAGCCCACATAGCTATGTCTCTGCTAGTCTCACAGGTTAGGGTTACTTCTATTATTTAGATATA 74 3232925 0.978720204 21 72 548 0.988888889 1.949390007 0.088888889 0.148648649 0.3 74 1 0 89 3L:3232828-3232959 6 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3L + 3232837 3232943 3'utr CG11505 FlyBase G20964.1 GCTTACACATCAGAACGTAATGTTTATAGCCAAAACAGAAGTACACAGATAAGAGTGCGTAGCCCACATAGCTATGTCTCTGCTAGTCTCACAGGTTAGGGTTACTT 34 3232925 0.984246319 7 33 261 0.978723404 1.662757832 0.021276596 0.294117647 0.489361702 34 1 0 46 3L:3232837-3232943 6 37.5 3065 FBgn0035424 4177.206667 52.67666667 80.83333333 0.008977291 0.711890147 0.463917526 -6 -6 -6 0.01 dme-miR-7-5p 6mer2-7 TCTTCC 3L 3233143 3233148 + 3L_3233143_3233148_+ 0.999999999 1 1 0 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3233003 3233174 3'utr CG11505 FlyBase G27691.1 ATTGTAACATTTTAACGGATGATCTTGTTTGCGCAAGAGGGTTTTTTTTTAATTAACTTGATTATGGGGATTCTCGTACTTAGTTCACGACTTAAGGGATCCTTTACACAGACACACCTGAATACGCCTAGACTAACTTATCTTCCCCCCAGACACCGACCCGTGAATACCC 199 3233145 0.869628357 16 196 1270 0.981900452 2.336459734 0.180995475 0.095477387 0.185520362 199 4 0 217 3L:3233003-3233174 6 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 TCTTCC 6mer2-7 dme-miR-7-5p 3L + 3233109 3233171 3'utr CG11505 FlyBase G20966.1 CACAGACACACCTGAATACGCCTAGACTAACTTATCTTCCCCCCAGACACCGACCCGTGAATA 57 3233145 0.962062124 4 56 279 0.987179487 1.886490725 0.256410256 0.298245614 0.487179487 57 1 0 77 3L:3233109-3233171 6 93.5 3066 FBgn0035424 4177.206667 52.67666667 80.83333333 0.022383379 1.774979434 1.156701031 -2 -2 -2 0.01 dme-miR-7-5p 6mer2-7 TCTTCC 3L 3233578 3233583 + 3L_3233578_3233583_+ 0.999999999 1 1 0 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3233559 3233615 3'utr CG11505 FlyBase G27693.1 AGCTGCTTCATCTTCATCCTCTTCCCAAATTATTGATGCTCACCTTAGGTATACATT 21 3233592 0.795930226 8 21 183 1 1.414973348 0.038461538 0.19047619 0.346153846 21 0 0 26 3L:3233559-3233615 6 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 TCTTCC 6mer2-7 dme-miR-7-5p 3L + 3233578 3233613 3'utr CG11505 FlyBase G20968.1 TCTTCCCAAATTATTGATGCTCACCTTAGGTATACA 9 3233592 0.658856735 4 8 60 1 1.079181246 0.083333333 0.222222222 0.416666667 9 0 0 12 3L:3233578-3233613 5 6.5 3067 FBgn0035424 4177.206667 52.67666667 80.83333333 0.001556064 0.123394292 0.080412371 -14 -14 -14 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 3L 3233766 3233771 + 3L_3233766_3233771_+ 0.999999999 0.999347995 0.999673997 0.000461034 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3233716 3233825 3'utr CG11505 FlyBase G27694.1 AGCATGTAAATTGATTCCCGAAGCATTGAAACAATTGGCAAGGGAGTAATGAAAAATAATCAGTAGACTTAAGAGCGTACACACGATATCTACAAATTATTCTAGGCATA 21 3233779 0.782824844 11 19 103 0.962962963 1.113943352 0.37037037 0.25 0.444444444 20 0 1 26 3L:3233716-3233825 6 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 GAAAAA 6mer3-8 dme-miR-980-5p 3L + 3233698 3233827 3'utr CG11505 FlyBase G20969.1 GTTTATTCAAATTTAAGAAGCATGTAAATTGATTCCCGAAGCATTGAAACAATTGGCAAGGGAGTAATGAAAAATAATCAGTAGACTTAAGAGCGTACACACGATATCTACAAATTATTCTAGGCATAAG 19 3233779 0.961634821 12 18 97 0.96 1.079181246 0.28 0.263157895 0.44 19 0 1 24 3L:3233698-3233827 6 6 3068 FBgn0035424 4177.206667 52.67666667 80.83333333 0.001436367 0.113902424 0.074226804 -13 -13 -13 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 3233942 3233947 + 3L_3233942_3233947_+ 0.999999999 1 1 0 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3233891 3233949 3'utr CG11505 FlyBase G27695.1 AGTCAATTCCTTTGATTTGAGAACAAAACTGCTCCGCCCTTTCACTTCGACACCAAAAC 85 3233930 0.734283014 7 83 404 0.982905983 1.759667845 0.008547009 0.270588235 0.47008547 85 1 1 115 3L:3233891-3233949 6 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 3233904 3233947 3'utr CG11505 FlyBase G20970.1 GATTTGAGAACAAAACTGCTCCGCCCTTTCACTTCGACACCAAA 65 3233930 0.683537868 7 60 285 0.917647059 1.892094603 0.035294118 0.246153846 0.423529412 65 7 0 78 3L:3233904-3233947 6 8 3069 FBgn0035424 4177.206667 52.67666667 80.83333333 0.001915155 0.151869898 0.098969072 12 12 12 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 3233990 3233995 + 3L_3233990_3233995_+ 0.999999999 1 1 0 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3233970 3234090 3'utr CG11505 FlyBase G27696.1 TTTCCATTCGCAACCTCACTACCAAAACGAAGAAAACCCGCGTATTATGATTATCATTCTCTTTAATTAGATGCTTATGATTATGAACCCACTGTGAACACACTGAACAATGTTTTCCCAA 42 3233987 0.842278861 13 37 219 0.888888889 1.681241237 0.074074074 0.238095238 0.407407407 42 6 0 48 3L:3233970-3234090 6 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 3233973 3234030 3'utr CG11505 FlyBase G20971.1 CCATTCGCAACCTCACTACCAAAACGAAGAAAACCCGCGTATTATGATTATCATTCTC 14 3233987 0.824402364 4 13 45 0.95 1.278753601 0.5 0.285714286 0.5 14 1 0 19 3L:3233973-3234030 6 14 3070 FBgn0035424 4177.206667 52.67666667 80.83333333 0.003351522 0.265772322 0.173195876 3 3 3 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 3L 3234140 3234145 + 3L_3234140_3234145_+ 0.99997482 1 0.99998741 1.78E-05 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3234117 3234180 3'utr CG11505 FlyBase G27697.1 AAAATCAAAAACGAATGAGAAATGAAAAATGAACTCTAAACGCAAGACTTCCAACCAAAATGAA 14 3234165 0.864057487 6 14 35 1 1.255272505 0.388888889 0.214285714 0.388888889 14 0 0 18 3L:3234117-3234180 6 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 GAAAAA 6mer3-8 dme-miR-980-5p 3L + 3234125 3234180 3'utr CG11505 FlyBase G20973.1 AAACGAATGAGAAATGAAAAATGAACTCTAAACGCAAGACTTCCAACCAAAATGAA 10 3234139 0.91956582 5 10 33 1 1.146128036 0.071428571 0.4 0.571428571 10 0 0 14 3L:3234125-3234180 6 6 3071 FBgn0035424 4177.206667 52.67666667 80.83333333 0.001436367 0.113902424 0.074226804 -25 1 -12 0.01 dme-miR-184-5p 7mer-A1 GATAAGA 3L 3234200 3234206 + 3L_3234200_3234206_+ 0.782911823 0.782911824 0.782911824 0 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3234188 3234231 3'utr CG11505 FlyBase G27698.1 ATATAAGAGAAGGATAAGAAAACTGAAAAATCAATATATATACA 17 3234202 0.965421836 4 17 41 1 1.361727836 0 0.352941176 0.52173913 17 0 0 23 3L:3234188-3234231 7 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 GATAAGA 7mer-A1 dme-miR-184-5p 3L + 3234185 3234230 3'utr CG11505 FlyBase G20974.1 AAAATATAAGAGAAGGATAAGAAAACTGAAAAATCAATATATATAC 15 3234202 0.918899134 5 15 40 1 1.322219295 0 0.333333333 0.523809524 15 0 0 21 3L:3234185-3234230 7 14.5 3072 FBgn0035424 4177.206667 52.67666667 80.83333333 0.003471219 0.27526419 0.179381443 -2 -2 -2 0.01 dme-miR-34-5p 6mer2-7 ACTGCC 3L 3234396 3234401 + 3L_3234396_3234401_+ 0.999999999 1 1 0 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3234331 3234418 3'utr CG11505 FlyBase G27699.2 AACCCATGTGGCACCATCCGCCCATCAAGTCCCTTCAAATCGCATCTGATCACAAACGACACACAACTGCCTCTAGGACATAAACAGC 16 3234402 0.929571885 6 15 58 0.941176471 1.204119983 0.058823529 0.0625 0.117647059 16 1 0 16 3L:3234331-3234418 6 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 ACTGCC 6mer2-7 dme-miR-34-5p 3L + 3234335 3234418 3'utr CG11505 FlyBase G20976.1 CATGTGGCACCATCCGCCCATCAAGTCCCTTCAAATCGCATCTGATCACAAACGACACACAACTGCCTCTAGGACATAAACAGC 14 3234402 0.965294032 5 10 53 0.736842105 0.84509804 0.263157895 0.285714286 0.473684211 14 4 1 14 3L:3234335-3234418 6 6.5 3073 FBgn0035424 4177.206667 52.67666667 80.83333333 0.001556064 0.123394292 0.080412371 -6 -6 -6 0.01 dme-miR-7-5p 6mer2-7 TCTTCC 3L 3234631 3234636 + 3L_3234631_3234636_+ 0.999999999 1 1 0 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3234548 3234682 3'utr CG11505 FlyBase G27700.2 CAGATAGTATACCTTGCTCAGTGTTTCGTCTCGTACCCGCCACACAAATGTATCTTTAAATAATTCATAGTTTATAGTTTGTATCTTCCCCTCCAAATCGATGAGAAAGACCCAATCAAACTGTAAGCCAACTAA 35 3234634 0.987690095 15 32 311 0.926829268 1.278753601 0.292682927 0.142857143 0.268292683 35 2 1 38 3L:3234548-3234682 6 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 TCTTCC 6mer2-7 dme-miR-7-5p 3L + 3234610 3234670 3'utr CG11505 FlyBase G20979.1 ATTCATAGTTTATAGTTTGTATCTTCCCCTCCAAATCGATGAGAAAGACCCAATCAAACTG 19 3234634 0.986906514 3 18 160 1 1.361727836 0.086956522 0.157894737 0.304347826 19 0 0 23 3L:3234610-3234670 6 18.5 3074 FBgn0035424 4177.206667 52.67666667 80.83333333 0.004428797 0.351199139 0.228865979 -3 -3 -3 0.01 dme-miR-307a-3p 6mer2-7 GTTGTG 3L 3234732 3234737 + 3L_3234732_3234737_+ 0.999999999 1 1 0 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3234695 3234792 3'utr CG11505 FlyBase G27701.1 ACACACACATTTCTTTGGAATGTTCTCAAATGATTTTGTTGTGCTCATCACTCACTGTCGGCTGACAACAGAAAATTATACAAAACAACACTCTACAC 19 3234751 0.99375579 11 14 156 0.714285714 1.176091259 0.095238095 0.105263158 0.19047619 19 6 0 15 3L:3234695-3234792 6 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 GTTGTG 6mer2-7 dme-miR-307a-3p 3L + 3234715 3234775 3'utr CG11505 FlyBase G20980.1 TGTTCTCAAATGATTTTGTTGTGCTCATCACTCACTGTCGGCTGACAACAGAAAATTATAC 13 3234750 0.969453362 7 13 75 1 1.255272505 0.333333333 0.307692308 0.5 13 0 0 18 3L:3234715-3234775 6 9.5 3075 FBgn0035424 4177.206667 52.67666667 80.83333333 0.002274247 0.180345504 0.117525773 -19 -18 -18.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 3234955 3234961 + 3L_3234955_3234961_+ 0.751872088 0.750599594 0.751235841 0.000899793 CG11505 FBtr0073046|FBtr0073046|FBtr0073046|FBtr0308061|FBtr0308061|FBtr0308061 3232050|3232050|3232050|3232050|3232050|3232050 3236604|3236604|3236604|3236604|3236604|3236604 3L + 3234818 3234998 3'utr CG11505 FlyBase G27702.1 TAACACACTGTACAGTTGAACCTCAATAGGGCGGACTGCGGACTGCGCCTTAGGTGAATCAATGGATGAGGAACAGCATGTGGCCAGAGTGGAGCCAGCTGTTCGTTGGCGACGTCTCCAAGCTTCCGACAATGAGATGTGATATTATGCAATTGACAAATCATCAATTGTGTGCGACAAA 77 3234963 0.973348285 23 68 461 0.903225806 1.924279286 0.193548387 0.171052632 0.322580645 76 9 0 84 3L:3234818-3234998 7 CG11505 FBtr0308061|FBtr0308061|FBtr0308061|FBtr0073046|FBtr0073046|FBtr0073046 3232050|3232050|3232050|3232050|3232050|3232050 3236604|3236604|3236604|3236604|3236604|3236604 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 3234907 3234974 3'utr CG11505 FlyBase G20982.1 TGGAGCCAGCTGTTCGTTGGCGACGTCTCCAAGCTTCCGACAATGAGATGTGATATTATGCAATTGAC 47 3234962 0.829281749 10 43 298 0.86746988 1.079181246 0.253012048 0.425531915 0.674698795 47 6 5 72 3L:3234907-3234974 7 43.5 3076 FBgn0035424 4177.206667 52.67666667 80.83333333 0.010413658 0.825792571 0.53814433 -8 -7 -7.5 0.01 dme-miR-34-5p 8mer-A1 CACTGCCA 3L 3235651 3235658 + 3L_3235651_3235658_+ 0.678407974 0.678407975 0.678407974 0 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3235547 3235663 3'utr CG11505 FlyBase G27706.2 CCTATGGAATGTGCCCCCCAACAGACCACTGTACATACCCTTAGCTATACATTTACATTTCCGGGGGCAATTTTCTCCTGATTTCATGCGATCACCTTCTTTGGCACTGCCATCAAA 30 3235647 0.98699469 12 24 209 0.823529412 1.447158031 0.088235294 0.133333333 0.235294118 30 6 0 28 3L:3235547-3235663 8 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 CACTGCCA 8mer-A1 dme-miR-34-5p 3L + 3235603 3235663 3'utr CG11505 FlyBase G20988.1 ATTTCCGGGGGCAATTTTCTCCTGATTTCATGCGATCACCTTCTTTGGCACTGCCATCAAA 16 3235647 0.984673081 8 15 124 0.95 1.278753601 0 0.25 0.4 16 1 0 19 3L:3235603-3235663 8 11 3077 FBgn0035424 4177.206667 52.67666667 80.83333333 0.002633339 0.20882111 0.136082474 4 4 4 0.01 dme-miR-317-5p 6mer2-7 TATCCC 3L 3236067 3236072 + 3L_3236067_3236072_+ 1 1 1 0 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3236056 3236105 3'utr CG11505 FlyBase G27708.2 AAGAAATACAATATCCCTCTATGCAGCAAGCGAAAGCAAAACCAACAGCA 261 3236077 0.974254046 3 255 945 0.982698962 1.976197085 0.100346021 0.095785441 0.183391003 261 3 2 284 3L:3236056-3236105 6 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 TATCCC 6mer2-7 dme-miR-317-5p 3L + 3236026 3236121 3'utr CG11505 FlyBase G20990.1 ATTGCATATGATTTAAACTATAAACTAACTAAGAAATACAATATCCCTCTATGCAGCAAGCGAAAGCAAAACCAACAGCAGTTATACATAATTGAA 105 3236077 0.97517599 6 103 361 0.986842105 2.176091259 0.184210526 0.342857143 0.546052632 105 2 0 150 3L:3236026-3236121 6 168 3078 FBgn0035424 4177.206667 52.67666667 80.83333333 0.040218264 3.189267861 2.078350515 -10 -10 -10 0.01 dme-miR-317-3p 6mer2-7 GTGTTC 3L 3237104 3237109 - 3L_3237104_3237109_- 1 1 1 0 CG17746 FBtr0073093|FBtr0073094 3236945|3236803 3237161|3237161 3L - 3237088 3237145 3'utr CG17746 FlyBase G34016.2 AGCGCTTAGGTCAACTCTTTATACTTAACAGCGCAAGTGTTCTTGGTTAAGTTTTATA 57 3237103 0.696775072 9 52 418 0.897058824 1.785329835 0.014705882 0.175438596 0.308823529 57 7 0 61 3L:3237088-3237145 6 CG17746 FBtr0073094|FBtr0073093 3236803|3236945 3237161|3237161 GTGTTC 6mer2-7 dme-miR-317-3p 3L - 3237094 3237159 3'utr CG17746 FlyBase G25727.1 AGGGTTACAGAAATAGCGCTTAGGTCAACTCTTTATACTTAACAGCGCAAGTGTTCTTGGTTAAGT 30 3237103 0.979886265 5 30 208 1 1.681241237 0 0.5 0.6875 30 0 0 48 3L:3237094-3237159 6 32 3079 FBgn0035425 682.9733333 50 76.58666667 0.046853952 0.64 0.417827298 -6 -6 -6 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 3313055 3313060 + 3L_3313055_3313060_+ 1 1 1 0 ZnT63C FBtr0073056|FBtr0073054|FBtr0073055|FBtr0073057|FBtr0073058|FBtr0330104 3313011|3313011|3313011|3313011|3313011|3313011 3313476|3313476|3314009|3313476|3313476|3313476 3L + 3313004 3313058 stop_codon ZnT63C FlyBase G27712.1 TTGGTTTGACGACAGCCACATCAGGCGCAACAACATGTACACTTTGCCACGACCA 5 3313039 0.943911652 3 5 22 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 3L:3313004-3313058 4 ZnT63C FBtr0330104|FBtr0073055|FBtr0073057|FBtr0073056|FBtr0073054|FBtr0073058 3313011|3313011|3313011|3313011|3313011|3313011 3313476|3314009|3313476|3313476|3313476|3313476 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 3313003 3313058 stop_codon ZnT63C FlyBase G20992.1 TTTGGTTTGACGACAGCCACATCAGGCGCAACAACATGTACACTTTGCCACGACCA 7 3313046 0.943707494 5 7 30 1 0.84509804 0 0 0 7 0 0 7 3L:3313003-3313058 4 2 3080 FBgn0035432 2241.986667 107.03 164.0533333 0.000892066 0.01868635 0.012191157 16 9 12.5 0.01 dme-miR-14-3p 6mer2-7 AGACTG 3L 3313345 3313350 + 3L_3313345_3313350_+ 1 1 1 0 ZnT63C FBtr0073056|FBtr0073054|FBtr0073055|FBtr0073057|FBtr0073058|FBtr0330104 3313011|3313011|3313011|3313011|3313011|3313011 3313476|3313476|3314009|3313476|3313476|3313476 3L + 3313214 3313374 stop_codon ZnT63C FlyBase G27714.1 CGGGAGCTTCAGTTGCAGGCCGAACAGCAGTATCAGGAGCAGGTGTCACCACTGAGTACCAGGAATGGCGACGAGGTGGCACTCTAATTAGGAGCCTAGTTTAACGTTAATTGTGCAAACCGCTGCAATGGAGACTGGTCTGCCATGGTGCAGCTTTCGTG 66 3313342 0.959214535 14 63 311 0.959459459 1.550228353 0.337837838 0.106060606 0.202702703 66 2 1 71 3L:3313214-3313374 6 ZnT63C FBtr0330104|FBtr0073055|FBtr0073057|FBtr0330103|FBtr0073056|FBtr0073054|FBtr0073058 3313011|3313011|3313011|3313299|3313011|3313011|3313011 3313476|3314009|3313476|3313476|3313476|3313476|3313476 AGACTG 6mer2-7 dme-miR-14-3p 3L + 3313286 3313371 stop_codon ZnT63C FlyBase G20995.1 GAGGTGGCACTCTAATTAGGAGCCTAGTTTAACGTTAATTGTGCAAACCGCTGCAATGGAGACTGGTCTGCCATGGTGCAGCTTTC 38 3313342 0.963587387 11 38 198 1 1.763427994 0.206896552 0.342105263 0.568965517 38 0 0 58 3L:3313286-3313371 6 41.5 3081 FBgn0035432 2241.986667 107.03 164.0533333 0.018510369 0.387741755 0.252966515 3 3 3 0.01 dme-miR-1012-3p 7mer-A1 TGACTAA 3L 3313740 3313746 + 3L_3313740_3313746_+ 0.823349562 0.823349562 0.823349562 0 ZnT63C FBtr0073055 3313011 3314009 3L + 3313729 3313769 3'utr ZnT63C FlyBase G27716.2 GGATTAGCAAATGACTAAAGACAGTTTACAAAATACATAGG 14 3313753 0.795231914 4 11 60 0.888888889 1.204119983 0.055555556 0.214285714 0.388888889 14 2 0 16 3L:3313729-3313769 7 ZnT63C FBtr0073055 3313011 3314009 TGACTAA 7mer-A1 dme-miR-1012-3p 3L + 3313727 3313769 3'utr ZnT63C FlyBase G20999.1 ACGGATTAGCAAATGACTAAAGACAGTTTACAAAATACATAGG 7 3313753 0.752063075 4 6 30 0.909090909 1 0.272727273 0.428571429 0.636363636 7 1 0 10 3L:3313727-3313769 7 9.5 3082 FBgn0035432 2241.986667 107.03 164.0533333 0.004237313 0.088760161 0.057907997 -13 -13 -13 0.01 dme-bantam-3p 7mer-m8 TGATCTC 3L 3320887 3320893 + 3L_3320887_3320893_+ 0.661615243 0.661615243 0.661615243 0 CG42456 FBtr0300240 3320650 3322489 3L + 3320867 3320925 3'utr CG42456 FlyBase G27722.1 CACCATTGGCGAGGTGCGTCTGATCTCGCAGGATGACTACTTTCTGCCCGTGGAGGACA 14 3320886 0.735583011 7 12 66 0.882352941 1.176091259 0.588235294 0.142857143 0.294117647 14 2 0 15 3L:3320867-3320925 7 CG42456 FBtr0300240 3320650 3322489 TGATCTC 7mer-m8 dme-bantam-3p 3L + 3320870 3320924 3'utr CG42456 FlyBase G21003.1 CATTGGCGAGGTGCGTCTGATCTCGCAGGATGACTACTTTCTGCCCGTGGAGGAC 6 3320887 0.976263188 3 6 33 1 0.77815125 0.166666667 0 0 6 0 0 6 3L:3320870-3320924 7 6.5 3083 FBgn0259933 101.7866667 5.366666667 8.34 0.063859052 1.211180124 0.779376499 1 0 0.5 0.01 dme-miR-1008-3p 7mer-m8 AGCTGTG 3L 3322226 3322232 + 3L_3322226_3322232_+ 0.671795832 0.671795832 0.671795832 0 CG42456 FBtr0300240 3320650 3322489 3L + 3322137 3322255 3'utr CG42456 FlyBase G27726.1 GTTATTATGGGTGACATGGTCTCTCTTGTGGAGAATGCTCTTGTAACCAGATTGTGAAATGAAGAAACTCGGTTCAGGAATTCATATTTAGCTGTGCTAACTATTATATTGTATTGTTT 147 3322224 0.820435875 21 142 1328 0.963636364 1.900367129 0.248484848 0.102040816 0.2 147 5 1 159 3L:3322137-3322255 7 CG42456 FBtr0300240 3320650 3322489 AGCTGTG 7mer-m8 dme-miR-1008-3p 3L + 3322136 3322247 3'utr CG42456 FlyBase G21005.1 AGTTATTATGGGTGACATGGTCTCTCTTGTGGAGAATGCTCTTGTAACCAGATTGTGAAATGAAGAAACTCGGTTCAGGAATTCATATTTAGCTGTGCTAACTATTATATTG 101 3322224 0.799609662 20 96 880 0.953642384 2.158362492 0.231788079 0.356435644 0.569536424 101 7 0 144 3L:3322136-3322247 7 69.5 3084 FBgn0259933 101.7866667 5.366666667 8.34 0.682800629 12.95031056 8.333333333 2 2 2 0.01 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 3370478 3370485 - 3L_3370478_3370485_- 0.643565469 0.643565469 0.643565469 0 YT521-B FBtr0073078 3370449 3371600 3L - 3370450 3370507 3'utr YT521-B FlyBase G34049.1 TGCACGAAGAAACTTAGAGAGAAAGACTGATGCCTAATAAAGACTCAAGCTGATTGCA 87 3370477 0.757700146 7 84 339 0.963302752 1.720159303 0.128440367 0.206896552 0.366972477 87 3 1 105 3L:3370450-3370507 8 YT521-B FBtr0073078 3370449 3371600 AAGACTGA 8mer-A1 dme-miR-14-3p 3L - 3370455 3370508 3'utr YT521-B FlyBase G25745.1 TTGCACGAAGAAACTTAGAGAGAAAGACTGATGCCTAATAAAGACTCAAGCTGA 75 3370494 0.904162336 5 65 274 0.87037037 1.672097858 0.231481481 0.32 0.527777778 75 13 1 94 3L:3370455-3370508 8 76 3085 FBgn0027616 901.75 38.03333333 58.06666667 0.084280566 1.998247152 1.308840413 -8 9 0.5 0.01 dme-miR-980-5p 7mer-A1 AAAAACA 3L 3371367 3371373 - 3L_3371367_3371373_- 0.782911824 0.782911824 0.782911824 0 YT521-B FBtr0073079|FBtr0073078 3371285|3370449 3371600|3371600 3L - 3371292 3371379 3'utr YT521-B FlyBase G34051.1 AAGATTAAAAACAAACTTACGACTTAAGCAAATTTCAATACAGCAGAGATCTTAATGCTAATTAAATATTTTAAACCACAAAAATACA 31 3371363 0.938872346 8 31 123 1 1.544068044 0 0.096774194 0.2 31 0 0 35 3L:3371292-3371379 7 YT521-B FBtr0073078|FBtr0073079 3370449|3371285 3371600|3371600 AAAAACA 7mer-A1 dme-miR-980-5p 3L - 3371315 3371386 3'utr YT521-B FlyBase G25746.1 CCACACTAAGATTAAAAACAAACTTACGACTTAAGCAAATTTCAATACAGCAGAGATCTTAATGCTAATTAA 25 3371363 0.813800377 5 23 100 0.931818182 1.311753861 0 0.56 0.75 25 2 1 41 3L:3371315-3371386 7 21 3086 FBgn0027616 901.75 38.03333333 58.06666667 0.023288051 0.552147239 0.361653272 -10 -10 -10 0.01 dme-miR-988-3p 6mer3-8 ACAAGG 3L 3377622 3377627 + 3L_3377622_3377627_+ 1 1 1 0 CG12012 FBtr0073076|FBtr0300749|FBtr0346532 3377299|3377299|3377299 3377687|3377687|3377992 3L + 3377591 3377633 3'utr CG12012 FlyBase G27790.1 GTTTTCCAATTGAATAGTGATTTGGCTTTTTACAAGGATTTTA 43 3377612 0.707040914 9 39 403 0.919354839 1.278753601 0.080645161 0.348837209 0.548387097 43 3 2 57 3L:3377591-3377633 6 CG12012 FBtr0346532|FBtr0300749|FBtr0073076 3377299|3377299|3377299 3377992|3377687|3377687 ACAAGG 6mer3-8 dme-miR-988-3p 3L + 3377589 3377632 3'utr CG12012 FlyBase G21047.1 ATGTTTTCCAATTGAATAGTGATTTGGCTTTTTACAAGGATTTT 24 3377612 0.684486737 7 24 227 1 1.477121255 0.033333333 0.208333333 0.366666667 24 0 0 30 3L:3377589-3377632 6 9.5 3087 FBgn0035444 229.66 32.33 49.26666667 0.041365497 0.293844726 0.192828146 10 10 10 0.01 dme-miR-33-5p 7mer-A1 AATGCAA 3L 3401899 3401905 - 3L_3401899_3401905_- 0.782911824 0.782911824 0.782911824 0 sty FBtr0073145 3401151 3402955 3L - 3401862 3402226 3'utr sty FlyBase G34066.2 ATTGATATGTGTATGTGTGTGTATGTTGAGGGCGACGAACTTTTCGATAAATTTAGAGCAACCTATATAGACCAGTCTAAATGTGCTTAGAAACCGATATAGATGTACTGCAAACCAAAAGTCAGTTAGTTTACTTTACCAACTACGAAGCCGGAACAAATCTGAGGAGCGAAAATATGGGATAACGAAATCGATTGCTTATGAACTTATTTTATAGTTGAAGATCGATTGGTGGGTTCGTAGTGTTTCCAGCCAGAAGCCCCAAAAATGTGAGCAAGATTGTATATATGATGAAATTTTTAAGCGAAATGCGAGATACAAAATGCAAGCAAATTCCAAATAATAGAAAAACAAAAAACAACAAA 465 3401893 0.96140427 56 446 2218 0.95840868 1.87917783 0.283905967 0.169892473 0.30198915 465 17 6 530 3L:3401862-3402226 7 sty FBtr0073145 3401151 3402955 AATGCAA 7mer-A1 dme-miR-33-5p 3L - 3401866 3402096 3'utr sty FlyBase G25761.1 TTACTTTACCAACTACGAAGCCGGAACAAATCTGAGGAGCGAAAATATGGGATAACGAAATCGATTGCTTATGAACTTATTTTATAGTTGAAGATCGATTGGTGGGTTCGTAGTGTTTCCAGCCAGAAGCCCCAAAAATGTGAGCAAGATTGTATATATGATGAAATTTTTAAGCGAAATGCGAGATACAAAATGCAAGCAAATTCCAAATAATAGAAAAACAAAAAACAA 306 3401893 0.961620028 41 283 1416 0.940042827 1.943494516 0.331905782 0.379084967 0.593147752 306 24 4 439 3L:3401866-3402096 7 156.5 3088 FBgn0014388 33951.58333 1097.95 1702.483333 0.004609505 0.142538367 0.091924542 -12 -12 -12 0.01 dme-miR-980-5p 7mer-m1 AAAAACT 3L 3402451 3402457 - 3L_3402451_3402457_- 0.765582876 0.765586001 0.765584438 2.19E-06 sty FBtr0073145 3401151 3402955 3L - 3402424 3402504 3'utr sty FlyBase G34069.1 AAGTAAACGGGGCGAAAGTTTTTATTATTTTCATATACAAAACTGAAAAAAACTGAACAATTTGGGGCAAGCGTAACAAAA 21 3402443 0.900405543 9 20 92 0.9 1.431363764 0.1 0.380952381 0.566666667 21 3 0 27 3L:3402424-3402504 7 sty FBtr0073145 3401151 3402955 AAAAACT 7mer-m1 dme-miR-980-5p 3L - 3402306 3402471 3'utr sty FlyBase G25762.2 TATACAAAACTGAAAAAAACTGAACAATTTGGGGCAAGCGTAACAAAACACCATATTATATATACCTATATACACACACGGGAGAACTTTTAGAGAAATATTCAATGGCGTAAATTAGTCAAATATTATATATACCAAGTCCAGTCCATTTTTGATGTTGTAGAAA 46 3402443 0.850836887 22 41 237 0.897058824 1.086359831 0.117647059 0.282608696 0.514705882 46 3 4 61 3L:3402306-3402471 7 11.5 3089 FBgn0014388 33951.58333 1097.95 1702.483333 0.000338718 0.010474065 0.006754839 -14 -14 -14 0.01 dme-miR-988-3p 8mer-m1 ACAAGGGG 3L 3468163 3468170 - 3L_3468163_3468170_- 0.628235101 0.628235101 0.628235101 0 CG14971 FBtr0073143 3468021 3468780 3L - 3468112 3468206 3'utr CG14971 FlyBase G34135.1 AATTTGAAAGCTCCCGCAAACGTCTGATTAAATTAAACAAGGGGCATTGTTCTTTAGCGAATTATAAATAATGTCTTCGTTGTTTTTAGTTAATG 18 3468179 0.967224754 7 18 111 1 1.322219295 0 0.111111111 0.238095238 18 0 0 21 3L:3468112-3468206 8 CG14971 FBtr0073143 3468021 3468780 ACAAGGGG 8mer-m1 dme-miR-988-3p 3L - 3468169 3468201 3'utr CG14971 FlyBase G25816.1 GAAAGCTCCCGCAAACGTCTGATTAAATTAAAC 10 3468179 0.657015895 2 9 50 0.916666667 0.740362689 0.333333333 0.2 0.333333333 10 0 1 11 3L:3468169-3468201 1 5.5 3090 FBgn0035449 481.2366667 24.29333333 37.37 0.011428888 0.226399561 0.14717688 9 9 9 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 3468272 3468277 - 3L_3468272_3468277_- 1 1 1 0 CG14971 FBtr0073143 3468021 3468780 3L - 3468234 3468302 3'utr CG14971 FlyBase G34136.1 AGAAAGCCTTAATGACCCTTTCATTGTTCCTTAACTGACATCTTTAATTTGGCATTCCAAATTGAATTG 25 3468278 0.985077068 10 23 249 0.925925926 1.397940009 0 0.08 0.148148148 25 2 0 25 3L:3468234-3468302 6 CG14971 FBtr0073143 3468021 3468780 GTTCCT 6mer2-7 dme-miR-276a-3p 3L - 3468240 3468318 3'utr CG14971 FlyBase G25817.1 AACCTATGTAAAAATAAGAAAGCCTTAATGACCCTTTCATTGTTCCTTAACTGACATCTTTAATTTGGCATTCCAAATT 23 3468279 0.988176474 10 22 206 0.939393939 1.014240439 0.03030303 0.347826087 0.545454545 23 0 2 31 3L:3468240-3468318 6 18.5 3091 FBgn0035449 481.2366667 24.29333333 37.37 0.038442624 0.761525796 0.495049505 1 2 1.5 0.01 dme-miR-184-3p 6mer3-8 TCCGTC 3L 3468626 3468631 - 3L_3468626_3468631_- 1 1 1 0 CG14971 FBtr0073143 3468021 3468780 3L - 3468599 3468660 3'utr CG14971 FlyBase G34137.1 AGCTAGTTAGTTTGACACTCTTCATTCCTTCCGTCACCGATTCCCTCAACTTCCTCGATGCA 213 3468636 0.734454623 6 211 1698 0.992125984 2.401400541 0.106299213 0.154929577 0.291338583 213 2 0 252 3L:3468599-3468660 6 CG14971 FBtr0073143 3468021 3468780 TCCGTC 6mer3-8 dme-miR-184-3p 3L - 3468554 3468661 3'utr CG14971 FlyBase G25818.1 AAGCTAGTTAGTTTGACACTCTTCATTCCTTCCGTCACCGATTCCCTCAACTTCCTCGATGCATTCCCGCCTTGTGCATTTAGGGGCTAGGCTAGATATATGAGACGT 125 3468636 0.984114619 12 120 977 0.947368421 1.653212514 0.084210526 0.384 0.594736842 125 7 3 180 3L:3468554-3468661 6 164 3092 FBgn0035449 481.2366667 24.29333333 37.37 0.340788663 6.750823271 4.388546963 5 5 5 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 3L 3505233 3505238 + 3L_3505233_3505238_+ 0.887066823 0.931399026 0.909232924 0.031347599 CG42324 FBtr0334633|FBtr0330142 3505096|3505096 3505316|3505316 3L + 3505190 3505251 3'utr CG42324 FlyBase G27820.1 AATCACGAAGACTGCGTTAAGTTAACAATATGATTTCGTTCCCTTGACTGCATTTAACAATC 21 3505233 0.782574145 11 21 168 1 1.397940009 0.08 0.142857143 0.28 21 0 0 25 3L:3505190-3505251 6 CG42324 FBtr0330142|FBtr0334633 3505096|3505096 3505316|3505316 TTGACT 6mer3-8 dme-miR-1012-3p 3L + 3505171 3505246 3'utr CG42324 FlyBase G21076.1 TTTTCTAGGCAACGGATTCAATCACGAAGACTGCGTTAAGTTAACAATATGATTTCGTTCCCTTGACTGCATTTAA 19 3505232 0.990981629 10 16 159 0.869565217 1.301029996 0.086956522 0.210526316 0.347826087 19 3 0 20 3L:3505171-3505246 6 15.5 3093 FBgn0259224 58.33333333 1.43 2.216666667 0.265714286 10.83916084 6.992481203 0 1 0.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 3508575 3508580 + 3L_3508575_3508580_+ 1 1 1 0 CG42324 FBtr0334634|FBtr0334632|FBtr0334635|FBtr0334636 3508532|3508532|3508532|3508532 3510895|3510895|3510895|3510895 3L + 3508529 3508608 stop_codon CG42324 FlyBase G27835.1 TATAAGCAAACGGGGTCGAGGAATGCGCCACACATCCGCGAAGGAAACCAAACTGTATTCTAGCCTAGTTTTGCTAACTT 49 3508589 0.968826642 9 49 276 1 1.819543936 0.181818182 0.244897959 0.439393939 49 0 0 66 3L:3508529-3508608 6 CG42324 FBtr0334636|FBtr0334635|FBtr0334632|FBtr0334634 3508532|3508532|3508532|3508532 3510895|3510895|3510895|3510895 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 3508482 3508600 stop_codon CG42324 FlyBase G21090.1 CGGCCAGTCATCCAACGTCCTGACGCCCCACAGAACTGAAACGAATTTATAAGCAAACGGGGTCGAGGAATGCGCCACACATCCGCGAAGGAAACCAAACTGTATTCTAGCCTAGTTTT 48 3508589 0.976503739 10 46 206 0.971428571 1.531478917 0.171428571 0.3125 0.528571429 48 1 1 68 3L:3508482-3508600 6 36.5 3094 FBgn0259224 58.33333333 1.43 2.216666667 0.625714286 25.52447552 16.46616541 -14 -14 -14 0.01 dme-miR-7-5p 7mer-m8 GTCTTCC 3L 3508949 3508955 + 3L_3508949_3508955_+ 0.705950313 0.705950313 0.705950313 0 CG42324 FBtr0334634|FBtr0334632|FBtr0334635|FBtr0334636 3508532|3508532|3508532|3508532 3510895|3510895|3510895|3510895 3L + 3508924 3508960 3'utr CG42324 FlyBase G27838.1 TGTTCATTATATGTTACCCCTTAAAGTCTTCCTTTTC 13 3508956 0.922617944 5 10 122 0.769230769 0.698970004 0 0 0 13 2 1 10 3L:3508924-3508960 7 CG42324 FBtr0334636|FBtr0334635|FBtr0334632|FBtr0334634 3508532|3508532|3508532|3508532 3510895|3510895|3510895|3510895 GTCTTCC 7mer-m8 dme-miR-7-5p 3L + 3508913 3508961 3'utr CG42324 FlyBase G21094.1 TTTAGTATGTATGTTCATTATATGTTACCCCTTAAAGTCTTCCTTTTCA 10 3508957 0.992842402 7 9 106 0.909090909 0.698970004 0 0.1 0.181818182 10 0 1 10 3L:3508913-3508961 7 10.5 3095 FBgn0259224 58.33333333 1.43 2.216666667 0.18 7.342657343 4.736842105 -7 -8 -7.5 0.01 dme-miR-980-3p 6mer2-7 GCAGCT 3L 3509070 3509075 + 3L_3509070_3509075_+ 1 1 1 0 CG42324 FBtr0334634|FBtr0334632|FBtr0334635|FBtr0334636 3508532|3508532|3508532|3508532 3510895|3510895|3510895|3510895 3L + 3509048 3509086 3'utr CG42324 FlyBase G27839.2 AATCTGAAGCCCAACAGAAATTGCAGCTGAAATCAAAAG 18 3509068 0.809674087 2 17 60 0.95 1.278753601 0.1 0.111111111 0.2 18 1 0 19 3L:3509048-3509086 6 CG42324 FBtr0334636|FBtr0334635|FBtr0334632|FBtr0334634 3508532|3508532|3508532|3508532 3510895|3510895|3510895|3510895 GCAGCT 6mer2-7 dme-miR-980-3p 3L + 3509048 3509084 3'utr CG42324 FlyBase G21096.1 AATCTGAAGCCCAACAGAAATTGCAGCTGAAATCAAA 12 3509068 0.755389678 2 12 36 1 1.230448921 0.058823529 0.333333333 0.529411765 12 0 0 17 3L:3509048-3509084 6 14.5 3096 FBgn0259224 58.33333333 1.43 2.216666667 0.248571429 10.13986014 6.541353383 2 2 2 0.01 dme-miR-986-5p 6mer3-8 ATTCGA 3L 3509197 3509202 + 3L_3509197_3509202_+ 0.999998952 0.999994839 0.999996896 2.97E-06 CG42324 FBtr0334634|FBtr0334632|FBtr0334635|FBtr0334636 3508532|3508532|3508532|3508532 3510895|3510895|3510895|3510895 3L + 3509187 3509350 3'utr CG42324 FlyBase G27840.1 AACCACGAGAATTCGAAAACTTTGCCCAAGCAAACTTAGGTTACACTGGAAATATATGAATTATATTTATAGGAATATATAGATAATTATGCTATATACGATTTATATTTGATAAGCGCGTTATATTTTCTACATTCCGATTGTGCAATATTTTTTGGTAGTGT 27 3509208 0.973582754 13 26 233 0.96875 1.491361694 0.125 0.074074074 0.21875 27 1 0 31 3L:3509187-3509350 6 CG42324 FBtr0334636|FBtr0334635|FBtr0334632|FBtr0334634 3508532|3508532|3508532|3508532 3510895|3510895|3510895|3510895 ATTCGA 6mer3-8 dme-miR-986-5p 3L + 3509186 3509218 3'utr CG42324 FlyBase G21097.1 AAACCACGAGAATTCGAAAACTTTGCCCAAGCA 7 3509208 0.965099228 3 4 21 0.583333333 0.84509804 0.083333333 0.285714286 0.583333333 7 5 0 7 3L:3509186-3509218 6 7 3097 FBgn0259224 58.33333333 1.43 2.216666667 0.12 4.895104895 3.157894737 -11 -11 -11 0.01 dme-miR-92b-3p 8mer-A1 GTGCAATA 3L 3509329 3509336 + 3L_3509329_3509336_+ 0.628916032 0.628916032 0.628916032 0 CG42324 FBtr0334634|FBtr0334632|FBtr0334635|FBtr0334636 3508532|3508532|3508532|3508532 3510895|3510895|3510895|3510895 3L + 3509187 3509350 3'utr CG42324 FlyBase G27840.1 AACCACGAGAATTCGAAAACTTTGCCCAAGCAAACTTAGGTTACACTGGAAATATATGAATTATATTTATAGGAATATATAGATAATTATGCTATATACGATTTATATTTGATAAGCGCGTTATATTTTCTACATTCCGATTGTGCAATATTTTTTGGTAGTGT 27 3509327 0.973582754 13 26 233 0.96875 1.491361694 0.125 0.074074074 0.21875 27 1 0 31 3L:3509187-3509350 8 CG42324 FBtr0334636|FBtr0334635|FBtr0334632|FBtr0334634 3508532|3508532|3508532|3508532 3510895|3510895|3510895|3510895 GTGCAATA 8mer-A1 dme-miR-92b-3p 3L + 3509315 3509348 3'utr CG42324 FlyBase G21098.1 TCTACATTCCGATTGTGCAATATTTTTTGGTAGT 9 3509327 0.842265092 2 7 92 0.705882353 1.079181246 0.117647059 0.555555556 0.764705882 9 5 0 12 3L:3509315-3509348 8 8.5 3098 FBgn0259224 58.33333333 1.43 2.216666667 0.145714286 5.944055944 3.834586466 2 2 2 0.01 dme-miR-980-5p 8mer-m1 GAAAAACT 3L 3509529 3509536 + 3L_3509529_3509536_+ 0.607906103 0.607906048 0.607906075 7.07E-08 CG42324 FBtr0334634|FBtr0334632|FBtr0334635|FBtr0334636 3508532|3508532|3508532|3508532 3510895|3510895|3510895|3510895 3L + 3509502 3509569 3'utr CG42324 FlyBase G27841.1 ATATACAAGTATTGTACCTTTTTGCCCGAAAAACTGTACTCATTCCTGCCCATTAGATGACCTTCATA 47 3509544 0.777480697 5 46 359 0.983606557 1.77815125 0.081967213 0.191489362 0.37704918 47 1 0 60 3L:3509502-3509569 8 CG42324 FBtr0334636|FBtr0334635|FBtr0334632|FBtr0334634 3508532|3508532|3508532|3508532 3510895|3510895|3510895|3510895 GAAAAACT 8mer-m1 dme-miR-980-5p 3L + 3509503 3509566 3'utr CG42324 FlyBase G21099.1 TATACAAGTATTGTACCTTTTTGCCCGAAAAACTGTACTCATTCCTGCCCATTAGATGACCTTC 35 3509544 0.982243168 5 34 257 0.980392157 1.698970004 0.117647059 0.342857143 0.549019608 35 1 0 50 3L:3509503-3509566 8 37.5 3099 FBgn0259224 58.33333333 1.43 2.216666667 0.642857143 26.22377622 16.91729323 -15 -15 -15 0.01 dme-miR-8-3p 6mer2-7 AGTATT 3L 355982 355987 + 3L_355982_355987_+ 1 1 1 0 Ptpmeg FBtr0306560|FBtr0306562|FBtr0306563 355526|355526|355526 356050|356050|356050 3L + 355940 356000 3'utr Ptpmeg FlyBase G26774.1 GCGAACCTTATACACTGATAGACATGAGAAGATAAAACTGTTAGTATTTTAGCACCAAATC 64 355981 0.664473635 11 49 408 0.766233766 1.293730757 0.155844156 0.15625 0.298701299 64 16 2 59 3L:355940-356000 6 Ptpmeg FBtr0306562|FBtr0306563|FBtr0306560 355526|355526|355526 356050|356050|356050 AGTATT 6mer2-7 dme-miR-8-3p 3L + 355924 355998 3'utr Ptpmeg FlyBase G20239.1 AAGAGCAACCGAGAATGCGAACCTTATACACTGATAGACATGAGAAGATAAAACTGTTAGTATTTTAGCACCAAA 40 355981 0.988009629 12 29 256 0.7 1.146128036 0.1 0.325 0.55 40 16 2 42 3L:355924-355998 6 45.5 3100 FBgn0261985 1055.98 31.95666667 49.17666667 0.043087937 1.423803067 0.925235545 1 1 1 0.01 dme-miR-33-5p 7mer-A1 AATGCAA 3L 3607701 3607707 + 3L_3607701_3607707_+ 0.782911824 0.782911824 0.782911824 0 Eip63E FBtr0302598|FBtr0073134|FBtr0110925|FBtr0110923|FBtr0110921|FBtr0110924|FBtr0330068|FBtr0073133|FBtr0073131|FBtr0110920|FBtr0073132|FBtr0073135|FBtr0110922|FBtr0301948 3607565|3607565|3607565|3607565|3607565|3607565|3607613|3607565|3607565|3607565|3607565|3607565|3607565|3607565 3610521|3608549|3608549|3608549|3608549|3610521|3608549|3608549|3608549|3608549|3608549|3608549|3608549|3608549 3L + 3607684 3607723 3'utr Eip63E FlyBase G27860.1 AATCGACAGCCATATATAATGCAAGAGGAACTTCTCGCCC 30 3607699 0.6075269 4 22 123 0.787878788 0.937852093 0.212121212 0.1 0.181818182 30 5 2 26 3L:3607684-3607723 7 Eip63E FBtr0110922|FBtr0073133|FBtr0301948|FBtr0110921|FBtr0073132|FBtr0110925|FBtr0073135|FBtr0302598|FBtr0110924|FBtr0330068|FBtr0073131|FBtr0110920|FBtr0073134|FBtr0110923 3607565|3607565|3607565|3607565|3607565|3607565|3607565|3607565|3607565|3607613|3607565|3607565|3607565|3607565 3608549|3608549|3608549|3608549|3608549|3608549|3608549|3610521|3610521|3608549|3608549|3608549|3608549|3608549 AATGCAA 7mer-A1 dme-miR-33-5p 3L + 3607667 3607836 3'utr Eip63E FlyBase G21110.1 CTATCGCATCATCCAGCAATCGACAGCCATATATAATGCAAGAGGAACTTCTCGCCCGCGCAGAAGTTTTGTACTATAATTCTATGATACTTTTTAGTTATTAGTTCGATTTCGCAGTGAGTTAGCTGAGGGAGTTTAGCAGAAGACACGGCACCAACGGCAGCATTTTA 30 3607699 0.956481142 16 29 145 0.930232558 1.602059991 0.302325581 0.4 0.581395349 30 3 0 40 3L:3607667-3607836 7 20.5 3101 FBgn0005640 1126.993333 37.81333333 57.97333333 0.018189992 0.542136812 0.353610856 2 2 2 0.01 dme-miR-79-3p 7mer-m8 TAGCTTT 3L 3615165 3615171 + 3L_3615165_3615171_+ 0.620204031 0.605508919 0.612856475 0.010391005 CG10359 FBtr0290290|FBtr0273204 3615072|3615072 3615244|3615244 3L + 3615135 3615195 3'utr CG10359 FlyBase G27866.1 AATCGATTGCTTGCATTTTAACCCTAGCTTTAGCTTTGAATCTCTCTGTGCGTGTGTGTGT 24 3615170 0.824682188 10 20 234 0.833333333 1.397940009 0.5 0.208333333 0.366666667 24 5 0 25 3L:3615135-3615195 7 CG10359 FBtr0273204|FBtr0290290 3615072|3615072 3615244|3615244 TAGCTTT 7mer-m8 dme-miR-79-3p 3L + 3615127 3615196 3'utr CG10359 FlyBase G21116.1 TAACCCACAATCGATTGCTTGCATTTTAACCCTAGCTTTAGCTTTGAATCTCTCTGTGCGTGTGTGTGTA 19 3615170 0.994499024 7 14 201 0.724137931 1.322219295 0.206896552 0.421052632 0.620689655 19 8 0 21 3L:3615127-3615196 7 14 3102 FBgn0035452 20.66666667 1.506666667 2.33 0.677419355 9.292035398 6.008583691 -5 -5 -5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 365330 365335 + 3L_365330_365335_+ 1 1 1 0 CG1233 FBtr0072548|FBtr0072549 365245|365245 365681|365681 3L + 365321 365363 3'utr CG1233 FlyBase G26782.1 GAGTTTTATACCAAAACTGTACCAATGTTATTAGTGTTAAGTA 8 365338 0.870981611 4 8 72 1 1 0.1 0.125 0.3 8 0 0 10 3L:365321-365363 6 CG1233 FBtr0072548|FBtr0072549 365245|365245 365681|365681 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 365321 365363 3'utr CG1233 FlyBase G20247.1 GAGTTTTATACCAAAACTGTACCAATGTTATTAGTGTTAAGTA 8 365339 0.854246055 4 7 73 1 1.113943352 0.307692308 0.5 0.692307692 8 0 0 13 3L:365321-365363 6 6.5 3103 FBgn0035137 556 16.52 25.12333333 0.011690647 0.39346247 0.25872363 -8 -9 -8.5 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 3L 3716840 3716845 - 3L_3716840_3716845_- 1 1 1 0 CG32264 FBtr0308639 3714824 3717391 3L - 3716808 3716857 3'utr CG32264 FlyBase G34145.1 ATTTACATTAAAGAAAAATGGCTGAGAAAAATTCATTAAAGCTTAGGCAT 26 3716839 0.923192659 2 26 85 1 1.447158031 0 0.076923077 0.142857143 26 0 0 28 3L:3716808-3716857 6 CG32264 FBtr0308639 3714824 3717391 GAAAAA 6mer3-8 dme-miR-980-5p 3L - 3716808 3716853 3'utr CG32264 FlyBase G25825.1 ACATTAAAGAAAAATGGCTGAGAAAAATTCATTAAAGCTTAGGCAT 11 3716839 0.868356572 2 11 25 1 1.176091259 0 0.363636364 0.533333333 11 0 0 15 3L:3716808-3716853 6 18.5 3104 FBgn0052264 847.8466667 26.52666667 40.85 0.021819983 0.69741141 0.452876377 -6 -6 -6 0.01 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3L 3803886 3803891 - 3L_3803886_3803891_- 1 1 1 0 ntc FBtr0073185 3803830 3803958 3L - 3803858 3803899 5'utr ntc FlyBase G34155.1 TTATTAAGTGGTGCATAAAGATTCTCGGGAATCATTGTATGT 5 3803878 0.908524541 2 5 45 1 0.698970004 0 0 0 5 0 0 5 3L:3803858-3803899 6 ntc FBtr0073185 3803830 3803958 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3L - 3803866 3803899 5'utr ntc FlyBase G25834.1 TTATTAAGTGGTGCATAAAGATTCTCGGGAATCA 5 3803891 0.785204915 2 5 35 1 0.954242509 0 0.4 0.666666667 5 0 0 9 3L:3803866-3803899 6 5 3105 FBgn0035461 62.16 4.68 6.936666667 0.08043758 1.068376068 0.720807304 -13 0 -6.5 0.01 dme-miR-304-5p 8mer-A1 TGAGATTA 3L 3813693 3813700 + 3L_3813693_3813700_+ 0.625363359 0.625363359 0.625363359 0 CG12006 FBtr0073150|FBtr0073149 3813623|3813623 3813958|3813958 3L + 3813605 3813717 stop_codon CG12006 FlyBase G27872.1 ACGAGAATCTGTTCAATTAGATAATAGAGAAAATAAGAGAACCCACCACCGACGCCCTCCGTTCAAAAGCAAGAAGCAATGACACATTTGAGATTAACTAATAGATACAAACC 53 3813692 0.999859162 8 51 308 0.970149254 1.812913357 0.059701493 0.226415094 0.388059701 53 2 0 65 3L:3813605-3813717 8 CG12006 FBtr0073149|FBtr0073150 3813623|3813623 3813958|3813958 TGAGATTA 8mer-A1 dme-miR-304-5p 3L + 3813564 3813704 stop_codon CG12006 FlyBase G21121.1 CGATCATCCGCCGCTGGAGGATCTCGTCCTGGCCAACGAGAACGAGAATCTGTTCAATTAGATAATAGAGAAAATAAGAGAACCCACCACCGACGCCCTCCGTTCAAAAGCAAGAAGCAATGACACATTTGAGATTAACTA 25 3813692 0.974048468 8 22 122 0.875 1.06694679 0.1 0.48 0.675 25 3 2 35 3L:3813564-3813704 8 27 3106 FBgn0035464 622.06 34.45666667 52.80333333 0.043404173 0.783592919 0.511331355 1 1 1 0.01 dme-bantam-3p 6mer2-7 GATCTC 3L 3813928 3813933 + 3L_3813928_3813933_+ 1 1 1 0 CG12006 FBtr0073150|FBtr0073149 3813623|3813623 3813958|3813958 3L + 3813906 3813951 3'utr CG12006 FlyBase G27874.1 ACTTGATCTGTCCTTTCTTTAAGATCTCGAAATAAAGGTTCAGTGG 15 3813924 0.981148013 4 14 134 0.894736842 0.753327667 0.052631579 0.133333333 0.315789474 15 0 2 17 3L:3813906-3813951 6 CG12006 FBtr0073149|FBtr0073150 3813623|3813623 3813958|3813958 GATCTC 6mer2-7 dme-bantam-3p 3L + 3813913 3813938 3'utr CG12006 FlyBase G21124.1 CTGTCCTTTCTTTAAGATCTCGAAAT 12 3813924 0.699683245 4 12 96 1 1.255272505 0 0.333333333 0.555555556 12 0 0 18 3L:3813913-3813938 6 13.5 3107 FBgn0035464 622.06 34.45666667 52.80333333 0.021702087 0.391796459 0.255665678 4 4 4 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA 3L 3818062 3818067 + 3L_3818062_3818067_+ 1 0.999999658 0.999999829 2.12E-07 Scsalpha FBtr0073151 3817998 3818383 3L + 3817910 3818237 stop_codon Scsalpha FlyBase G27883.2 CTGGAGAAGGCCGGCGTCATTGTGACCAGGAGTCCTGCCAAAATGGGCCACGAGCTCTTCAAGGAGATGAAGCGTCTGGAGTTAGTGTAAATAATTAAAGGCCATAACCAAACCGGAATCCGTACGCCGATCAAAGCGTATACGCAAACTCATGATGATGAACCTAACGTTAAGCTAAAAGTGTCGAAAATCGAAATTGCATTCGAGCGAACCCAAATAAATTATTGTGAAAAATTACTAGAGAGAAACGAGAGGCGTTGAATTGTGACATGTATTCCAAGAATTAAGTTAACTACTGCCGTACCACCAAGTTGAACTAAAATAACTC 108 3818062 0.95825696 29 102 487 0.938461538 1.484299839 0.146153846 0.166666667 0.307692308 108 5 3 122 3L:3817910-3818237 6 Scsalpha FBtr0303096|FBtr0073151 3817998|3817998 3818154|3818383 TGATGA 6mer3-8 dme-miR-2a-2-5p 3L + 3818034 3818102 3'utr Scsalpha FlyBase G21130.1 CGCCGATCAAAGCGTATACGCAAACTCATGATGATGAACCTAACGTTAAGCTAAAAGTGTCGAAAATCG 23 3818062 0.953537633 6 22 108 1 1.51851394 0.151515152 0.304347826 0.515151515 23 0 0 33 3L:3818034-3818102 6 22 3108 FBgn0004888 1159.643333 96.01 147.01 0.01897135 0.229142798 0.149649684 0 0 0 0.01 dme-miR-1006-3p 6mer3-8 CGAATT 3L 3818340 3818345 + 3L_3818340_3818345_+ 0.507200502 0.507200502 0.507200502 0 Scsalpha FBtr0073151 3817998 3818383 3L + 3818324 3818374 3'utr Scsalpha FlyBase G27884.1 GCTCGAATTATCAATGCGAATTGTATCTGAATGTGTAATAAATATGCATAA 21 3818345 0.786049582 3 20 156 0.962962963 1.414973348 0.296296296 0.285714286 0.444444444 21 1 0 26 3L:3818324-3818374 6 Scsalpha FBtr0073151 3817998 3818383 CGAATT 6mer3-8 dme-miR-1006-3p 3L + 3818328 3818358 3'utr Scsalpha FlyBase G21132.1 GAATTATCAATGCGAATTGTATCTGAATGTG 16 3818345 0.688206199 4 13 108 0.916666667 0.865301426 0.666666667 0.4375 0.625 16 0 2 22 3L:3818328-3818358 6 17 3109 FBgn0004888 1159.643333 96.01 147.01 0.01465968 0.177064889 0.115638392 -5 -5 -5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3L 3904981 3904986 + 3L_3904981_3904986_+ 1 1 1 0 Sc2 FBtr0073159 3904887 3905035 3L + 3904948 3905011 3'utr Sc2 FlyBase G27915.1 TACACATTTGGCTAGCGTTTAACAGGGTAGTTGTCTAGTGAACTTTGTGCTTTCGTTGATTTAA 7 3904998 0.990205251 5 7 69 1 0.84509804 0.428571429 0 0 7 0 0 7 3L:3904948-3905011 6 Sc2 FBtr0073159 3904887 3905035 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 3904945 3905004 3'utr Sc2 FlyBase G21149.1 ATTTACACATTTGGCTAGCGTTTAACAGGGTAGTTGTCTAGTGAACTTTGTGCTTTCGTT 7 3904999 0.986728422 5 7 59 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 3L:3904945-3905004 6 5 3110 FBgn0035471 431.6666667 47.85666667 72.68333333 0.011583012 0.104478652 0.068791562 -17 -18 -17.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 3936987 3936993 - 3L_3936987_3936993_- 0.80197041 0.801970433 0.801970421 0 CG10866 FBtr0073173|FBtr0073173|FBtr0073173|FBtr0345342|FBtr0345342|FBtr0345342 3936595|3936595|3936595|3936058|3936058|3936058 3937012|3937012|3937012|3937012|3937012|3937012 3L - 3936808 3937030 stop_codon CG10866 FlyBase G34187.1 CGCTACATGCAGGTCTAGGCTATATGTAGGAACACTTTGTGATAATATTGCAAAACATCATCAAATGGTAAATGCAAATTGCTTTTCAAGCTTCAAGCGCTTTAAGATTAGAGATCGCCTAGAAACCCAAATACTTCCTCGCAACAGGACACAATTTTACACGGATCTACTACTAGAAGTACCTTTTTGAGGGAACTATGCTTCCCGTCCAATTGATTTTTCT 422 3936994 0.809104586 37 401 3114 0.950664137 1.62065648 0.168880455 0.201421801 0.360531309 422 15 11 501 3L:3936808-3937030 7 CG10866 FBtr0345342|FBtr0345342|FBtr0345342|FBtr0073173|FBtr0073173|FBtr0073173 3936058|3936058|3936058|3936595|3936595|3936595 3937012|3937012|3937012|3937012|3937012|3937012 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 3936878 3937031 stop_codon CG10866 FlyBase G25861.2 TCGCTACATGCAGGTCTAGGCTATATGTAGGAACACTTTGTGATAATATTGCAAAACATCATCAAATGGTAAATGCAAATTGCTTTTCAAGCTTCAAGCGCTTTAAGATTAGAGATCGCCTAGAAACCCAAATACTTCCTCGCAACAGGACACA 216 3936994 0.802454071 20 198 1548 0.922330097 1.278753601 0.174757282 0.347222222 0.54368932 216 10 14 285 3L:3936878-3937031 7 194.5 3111 FBgn0035475 72.03666667 6.396666667 9.86 2.700013882 30.4064617 19.72616633 1 1 1 0.01 dme-miR-283-5p 8mer-A1 TGATATTA 3L 4037648 4037655 - 3L_4037648_4037655_- 0.592192292 0.592192292 0.592192292 0 CG11593 FBtr0114509|FBtr0332982 4037521|4037521 4038458|4038458 3L - 4037624 4037878 3'utr CG11593 FlyBase G34193.2 CGCATATTGTATATTCCAAGCGTTCCAAACACGACACTTTCGCTGACACATGATGGACCCCATGCCAGTCGACAGTAGGTGCCCCATTTATCTCATCCACCATCAGAGTTAGCCGATTAGCCTGTAAGTGAAATAGCGACCATTCTTTGTGGAATCTACACACGGACACACGTAGAATCTCTCTAGCGGATAATGTGACGTACAATTAGGCAATGTAACCGATTGATATTAAGAGCGACATTTTGTTGGTTTCCT 149 4037656 0.920366462 31 147 846 0.983870968 2.26245109 0.166666667 0.194630872 0.35483871 149 3 0 183 3L:4037624-4037878 8 CG11593 FBtr0332982|FBtr0114509 4037521|4037521 4038458|4038458 TGATATTA 8mer-A1 dme-miR-283-5p 3L - 4037612 4037746 3'utr CG11593 FlyBase G25865.1 ATAGCGACCATTCTTTGTGGAATCTACACACGGACACACGTAGAATCTCTCTAGCGGATAATGTGACGTACAATTAGGCAATGTAACCGATTGATATTAAGAGCGACATTTTGTTGGTTTCCTTTTACCGCTTTA 90 4037656 0.970502511 14 86 495 0.948148148 2.10720997 0.118518519 0.388888889 0.592592593 90 7 0 128 3L:4037612-4037746 8 55 3112 FBgn0035488 490 23.04 35.21 0.112244898 2.387152778 1.562056234 1 1 1 0.01 dme-bantam-3p 7mer-A1 GATCTCA 3L 4038288 4038294 - 3L_4038288_4038294_- 0.823349562 0.823349562 0.823349562 0 CG11593 FBtr0114509|FBtr0332982 4037521|4037521 4038458|4038458 3L - 4038211 4038392 3'utr CG11593 FlyBase G34196.1 ACTCGCTACTCGAGCCTCTGCATTCCCCATCTTCAATAAGGACTGAGGCTAATCCTCCAAACCGATCGTTTGCGCTCTCTCGCTATGCTTTAATTTAAGATCTCAATCTTTGTGATACTTTATTTTTGCCTTCTCTCAGCCAAGTCGAAATCCCCCCCAGCATTTTTCTGTGTGAAGCGTGA 190 4038301 0.987340644 28 178 1597 0.937219731 1.278753601 0.295964126 0.152631579 0.278026906 190 4 10 209 3L:4038211-4038392 7 CG11593 FBtr0332982|FBtr0114509 4037521|4037521 4038458|4038458 GATCTCA 7mer-A1 dme-bantam-3p 3L - 4038231 4038417 3'utr CG11593 FlyBase G25868.1 TGCAAACTTAACGCATTCATGCCACACTCGCTACTCGAGCCTCTGCATTCCCCATCTTCAATAAGGACTGAGGCTAATCCTCCAAACCGATCGTTTGCGCTCTCTCGCTATGCTTTAATTTAAGATCTCAATCTTTGTGATACTTTATTTTTGCCTTCTCTCAGCCAAGTCGAAATCCCCCCCAGCA 108 4038299 0.984197876 30 103 906 0.961783439 2.178976947 0.324840764 0.342592593 0.547770701 108 6 0 151 3L:4038231-4038417 7 80.5 3113 FBgn0035488 490 23.04 35.21 0.164285714 3.493923611 2.286282306 7 5 6 0.01 dme-miR-92b-3p 6mer2-7 TGCAAT 3L 4094423 4094428 - 3L_4094423_4094428_- 0.999999999 0.999999999 0.999999999 0 CG14995 FBtr0073272|FBtr0073271|FBtr0310630|FBtr0073273|FBtr0302304|FBtr0300877 4094341|4094341|4094341|4094341|4094341|4094341 4095008|4095008|4095008|4095008|4095008|4097425 3L - 4094398 4094473 3'utr CG14995 FlyBase G34204.1 AAAGCAAATAACGCTAAACCTTAATTTTAATATATTTACCTAAAATGCAATGAACACGTCCAGTTTATGTTTGCCG 8 4094423 0.977098458 5 7 56 0.888888889 0.602059991 0 0.125 0.222222222 8 0 1 8 3L:4094398-4094473 6 CG14995 FBtr0073272|FBtr0310630|FBtr0302304|FBtr0073271|FBtr0073273|FBtr0300877 4094341|4094341|4094341|4094341|4094341|4094341 4095008|4095008|4095008|4095008|4095008|4097425 TGCAAT 6mer2-7 dme-miR-92b-3p 3L - 4094406 4094445 3'utr CG14995 FlyBase G25875.1 AATATATTTACCTAAAATGCAATGAACACGTCCAGTTTAT 9 4094424 0.95768435 4 8 43 0.923076923 1.079181246 0.384615385 0.222222222 0.461538462 9 1 0 12 3L:4094406-4094445 6 7.5 3114 FBgn0035497 401.3666667 15.55333333 23.84 0.018686156 0.482211745 0.314597315 -5 -4 -4.5 0.01 dme-miR-305-5p 7mer-m1 GTACAAT 3L 4113940 4113946 + 3L_4113940_4113946_+ 0.765586663 0.765586663 0.765586663 0 Ack FBtr0073211 4113786 4114157 3L + 4113723 4113966 stop_codon Ack FlyBase G27961.1 AGGCGCTGCAGCAGACCAACTGGAGCTTAGAGGTGGCAGCTGAACTACTACTGAATGCCGGCTAAACCCACAAACTACAACCATGTATTACCGCCTCGAATGTAATTGCTTTAGTTTTACGTGCTGAATATTCTTTTAAACTTAGCTAACGATGTATCGAATCTTTATCAAAATACTCCTAGGTGAATGCGCGAATGCAAACACATTGTCAACGACTGTACAATTTGTTCTATTTAATGTAAGC 153 4113946 0.942671385 32 146 880 0.956989247 1.773298748 0.290322581 0.189542484 0.333333333 153 6 2 178 3L:4113723-4113966 7 Ack FBtr0073211 4113786 4114157 GTACAAT 7mer-m1 dme-miR-305-5p 3L + 4113810 4113958 3'utr Ack FlyBase G21181.1 TTACCGCCTCGAATGTAATTGCTTTAGTTTTACGTGCTGAATATTCTTTTAAACTTAGCTAACGATGTATCGAATCTTTATCAAAATACTCCTAGGTGAATGCGCGAATGCAAACACATTGTCAACGACTGTACAATTTGTTCTATTTA 95 4113946 0.842325462 21 89 603 0.957746479 1.832508913 0.352112676 0.4 0.598591549 95 5 1 136 3L:4113810-4113958 7 67 3115 FBgn0028484 434.37 11.81666667 17.96333333 0.15424638 5.669957687 3.729820004 -6 -6 -6 0.01 dme-bantam-3p 6mer3-8 TGATCT 3L 4114338 4114343 - 3L_4114338_4114343_- 1 1 1 0 Chd64 FBtr0073270|FBtr0310531 4114287|4114287 4114971|4114971 3L - 4114273 4114364 3'utr Chd64 FlyBase G34209.1 TACGTGTTACACACTTTTGAATGATCTATTTTAAATAATGTCCCCTGTTGAAAATAAATAATTATTCTTTTAACACATATTGCTTGTATCTT 44 4114343 0.992255081 11 42 476 0.961538462 1.698970004 0.057692308 0.136363636 0.269230769 44 2 0 50 3L:4114273-4114364 6 Chd64 FBtr0310531|FBtr0073270 4114287|4114287 4114971|4114971 TGATCT 6mer3-8 dme-bantam-3p 3L - 4114292 4114357 3'utr Chd64 FlyBase G25878.1 TACACACTTTTGAATGATCTATTTTAAATAATGTCCCCTGTTGAAAATAAATAATTATTCTTTTAA 25 4114344 0.992395246 8 24 264 0.973684211 1.568201724 0.157894737 0.4 0.605263158 25 1 0 37 3L:4114292-4114357 6 30 3116 FBgn0035499 3483.076667 314.5766667 480.2833333 0.008613075 0.095366259 0.062463129 0 1 0.5 0.01 dme-miR-2b-2-5p 7mer-m8 TTGAAGA 3L 4123188 4123194 - 3L_4123188_4123194_- 0.631525998 0.631525999 0.631525999 0 ens FBtr0345589|FBtr0073269 4122905|4123136 4124835|4124835 3L - 4123154 4123264 3'utr ens FlyBase G34221.1 TGGCGATATAATCAAAACAAAAGACAAGCCCACATAAGTTAAATGTGTATGCTACCAACATAACAAACCTTTGAAGATCAAGCTGAATTATGTATTTCTAATATTAAATAT 11 4123177 0.981612814 8 10 75 0.857142857 0.602059991 0.142857143 0.272727273 0.428571429 11 0 2 12 3L:4123154-4123264 7 ens FBtr0073269|FBtr0345589 4123136|4122905 4124835|4124835 TTGAAGA 7mer-m8 dme-miR-2b-2-5p 3L - 4123155 4123208 3'utr ens FlyBase G25891.1 AACATAACAAACCTTTGAAGATCAAGCTGAATTATGTATTTCTAATATTAAATA 7 4123194 0.950097947 5 7 51 1 1 0 0.428571429 0.6 7 0 0 10 3L:4123155-4123208 7 2.5 3117 FBgn0264693 3883.083333 100.8 155.21 0.000643818 0.024801587 0.01610721 -17 0 -8.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3L 4123296 4123301 - 3L_4123296_4123301_- 1 0.556341064 0.778170532 0.313714217 ens FBtr0345589|FBtr0073269 4122905|4123136 4124835|4124835 3L - 4123288 4123335 3'utr ens FlyBase G34222.1 GGCAATATGTGTATGCAACTAATAAGCCCTAACTTCTAGTTAATTACT 5 4123302 0.797604013 2 5 38 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 3L:4123288-4123335 6 ens FBtr0073269|FBtr0345589 4123136|4122905 4124835|4124835 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3L - 4123271 4123338 3'utr ens FlyBase G25892.1 AATGGCAATATGTGTATGCAACTAATAAGCCCTAACTTCTAGTTAATTACTGCTTTCCTATGTTATAA 10 4123302 0.657885278 7 9 72 0.933333333 0.84509804 0 0.5 0.666666667 10 0 1 14 3L:4123271-4123338 6 4 3118 FBgn0264693 3883.083333 100.8 155.21 0.001030109 0.03968254 0.025771535 1 1 1 0.01 dme-miR-970-3p 6mer2-7 CTTATG 3L 4123713 4123718 - 3L_4123713_4123718_- 1 1 1 0 ens FBtr0073267|FBtr0310636|FBtr0310634|FBtr0310637|FBtr0073268|FBtr0310635|FBtr0073265|FBtr0073266|FBtr0345589|FBtr0310633|FBtr0113135|FBtr0073269 4123551|4123551|4123551|4123551|4123551|4123551|4123551|4123551|4122905|4123551|4123551|4123136 4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835 3L - 4123652 4123792 3'utr ens FlyBase G34224.1 ATGCCTAGGTCTAGTGGAACTGGTAGTTCTACCATGTTGTACTATTTGTAGTAGGAGTCCCAAATCTGATTATGCTTATGTCACCCTTTATTATAGGAATGTTCTCTGTATATTATTGCGTCTCTTTTGCGTCTACGTATA 48 4123723 0.843640985 18 40 423 0.844827586 1.088136089 0.120689655 0.145833333 0.293103448 48 6 3 49 3L:4123652-4123792 6 ens FBtr0113135|FBtr0073269|FBtr0073265|FBtr0073266|FBtr0345589|FBtr0310633|FBtr0073268|FBtr0310636|FBtr0310635|FBtr0310637|FBtr0073267|FBtr0310634 4123551|4123136|4123551|4123551|4122905|4123551|4123551|4123551|4123551|4123551|4123551|4123551 4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835 CTTATG 6mer2-7 dme-miR-970-3p 3L - 4123710 4123786 3'utr ens FlyBase G25895.1 AGGTCTAGTGGAACTGGTAGTTCTACCATGTTGTACTATTTGTAGTAGGAGTCCCAAATCTGATTATGCTTATGTCA 21 4123724 0.741884886 9 17 137 0.774193548 0.903089987 0.032258065 0.238095238 0.483870968 21 5 2 24 3L:4123710-4123786 6 12 3119 FBgn0264693 3883.083333 100.8 155.21 0.003090328 0.119047619 0.077314606 5 6 5.5 0.01 dme-miR-8-3p 6mer2-7 AGTATT 3L 4124758 4124763 - 3L_4124758_4124763_- 1 1 1 0 ens FBtr0073267|FBtr0310636|FBtr0310634|FBtr0310637|FBtr0073268|FBtr0310635|FBtr0073265|FBtr0073266|FBtr0345589|FBtr0310633|FBtr0113135|FBtr0073269 4123551|4123551|4123551|4123551|4123551|4123551|4123551|4123551|4122905|4123551|4123551|4123136 4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835 3L - 4124691 4124854 stop_codon ens FlyBase G34233.1 AGATATATCGCTGCTGTGAATTGGATGAGGAAACCAAACTGATTGTTTTCTAAACCTAAATCTTGATATAGCTAAATGTGTGTGGAGTCGGAGTATTTATTTATAGGATGAGATCTATATAGGAATGCGAGTGGACAGTGCGACAAATTATGGTTACTAAAAAC 101 4124772 0.790073139 24 95 628 0.944 1.594760753 0.28 0.178217822 0.336 101 5 2 118 3L:4124691-4124854 6 ens FBtr0113135|FBtr0073269|FBtr0073265|FBtr0073266|FBtr0345589|FBtr0310633|FBtr0073268|FBtr0310636|FBtr0310635|FBtr0310637|FBtr0073267|FBtr0310634 4123551|4123136|4123551|4123551|4122905|4123551|4123551|4123551|4123551|4123551|4123551|4123551 4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835 AGTATT 6mer2-7 dme-miR-8-3p 3L - 4124687 4124789 3'utr ens FlyBase G25901.1 ATATAGCTAAATGTGTGTGGAGTCGGAGTATTTATTTATAGGATGAGATCTATATAGGAATGCGAGTGGACAGTGCGACAAATTATGGTTACTAAAAACAGGA 50 4124772 0.774725491 13 41 301 0.837209302 0.903089987 0.197674419 0.46 0.686046512 50 6 8 72 3L:4124687-4124789 6 18.5 3120 FBgn0264693 3883.083333 100.8 155.21 0.004764255 0.183531746 0.119193351 9 9 9 0.01 dme-miR-33-5p 8mer-A1 CAATGCAA 3L 4140749 4140756 + 3L_4140749_4140756_+ 0.634552243 0.634552243 0.634552243 0 Ras64B FBtr0073212 4140459 4141398 3L + 4140714 4140823 3'utr Ras64B FlyBase G27969.1 AAATAGCTACGAAGAATCTTACAACTGACAACTAACAATGCAAAATGCAAACAGAAACACGAAACATAGGTAGATATATACAACAGATTCACACGAATAACTTATATATA 48 4140746 0.940494905 9 44 177 0.9 1.73239376 0.35 0.208333333 0.366666667 48 6 0 54 3L:4140714-4140823 8 Ras64B FBtr0073212 4140459 4141398 CAATGCAA 8mer-A1 dme-miR-33-5p 3L + 4140694 4140766 3'utr Ras64B FlyBase G21184.1 GAATAAACTTCGCCACTCTCAAATAGCTACGAAGAATCTTACAACTGACAACTAACAATGCAAAATGCAAACA 30 4140746 0.850917177 9 28 111 0.955555556 1.633468456 0.488888889 0.333333333 0.555555556 30 2 0 43 3L:4140694-4140766 8 28.5 3121 FBgn0003206 861.7733333 65.11666667 99.82666667 0.033071341 0.437675966 0.285494858 3 3 3 0.01 dme-miR-318-3p 6mer3-8 CCCAGT 3L 4141209 4141214 + 3L_4141209_4141214_+ 1 1 1 0 Ras64B FBtr0073212 4140459 4141398 3L + 4141186 4141253 3'utr Ras64B FlyBase G27971.1 TTAACGATACTTTTGTACATGTCCCCAGTCGGATCCGGATCCTATGGTTTATTGTTCGCCAAATGTAT 8 4141199 0.987090434 6 7 59 0.888888889 0.903089987 0.333333333 0.125 0.222222222 8 1 0 8 3L:4141186-4141253 6 Ras64B FBtr0073212 4140459 4141398 CCCAGT 6mer3-8 dme-miR-318-3p 3L + 4141191 4141223 3'utr Ras64B FlyBase G21185.1 GATACTTTTGTACATGTCCCCAGTCGGATCCGG 6 4141205 0.994872032 2 3 27 0.636363636 0.84509804 0.272727273 0.666666667 0.818181818 6 4 0 7 3L:4141191-4141223 6 5.5 3122 FBgn0003206 861.7733333 65.11666667 99.82666667 0.006382189 0.084463783 0.055095499 10 4 7 0.01 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 4173445 4173451 + 3L_4173445_4173451_+ 0.823349562 0.823349562 0.823349562 0 Ero1L FBtr0073217 4173388 4173789 3L + 4173356 4173623 stop_codon Ero1L FlyBase G27974.1 CGAGATGGAGAATTTCCGGTGCGTGCTGAGGTAACCCATCCAGACTGGACTAACCGAGCGACGAGCCGGATCTCATTCGCCTCACATGAGCAGCTAGTTAATTCATACGCACATCGCTGGGGCTGCGTCTTGGACTTCCTACTGAATGCGGTTTCCCTCCCATAGTTCGTAACATTTTTGAGGCCAGAGGCTAGTAACCCCAGGATAGCTGCTTCCCTGTACATACAAACTATTACCCTAGGCTACTTGTACTTTAGCGCACCGTATC 507 4173442 0.949795386 31 498 3210 0.985148515 2.298853076 0.072607261 0.151873767 0.290429043 507 7 2 597 3L:4173356-4173623 7 Ero1L FBtr0073217 4173388 4173789 GCAGCTA 7mer-A1 dme-miR-980-3p 3L + 4173339 4173629 stop_codon Ero1L FlyBase G21189.1 CTATCCAACAGTATATACGAGATGGAGAATTTCCGGTGCGTGCTGAGGTAACCCATCCAGACTGGACTAACCGAGCGACGAGCCGGATCTCATTCGCCTCACATGAGCAGCTAGTTAATTCATACGCACATCGCTGGGGCTGCGTCTTGGACTTCCTACTGAATGCGGTTTCCCTCCCATAGTTCGTAACATTTTTGAGGCCAGAGGCTAGTAACCCCAGGATAGCTGCTTCCCTGTACATACAAACTATTACCCTAGGCTACTTGTACTTTAGCGCACCGTATCACCCTA 405 4173442 0.973535837 34 392 2374 0.975409836 2.172456974 0.091803279 0.377777778 0.586885246 405 12 3 595 3L:4173339-4173629 7 163 3123 FBgn0261274 553.5433333 32.04333333 49.15666667 0.294466558 5.086861542 3.315928663 3 3 3 0.01 dme-miR-1003-3p 6mer2-7 TGTGAG 3L 4173718 4173723 + 3L_4173718_4173723_+ 1 1 1 0 Ero1L FBtr0073217 4173388 4173789 3L + 4173702 4173749 3'utr Ero1L FlyBase G27975.1 TGTATCTGGAGGAGTTTGTGAGCGGAACTTAATGAGCAAGTAAACGCA 9 4173719 0.726727393 4 8 41 1 1.079181246 0.416666667 0.222222222 0.416666667 9 0 0 12 3L:4173702-4173749 6 Ero1L FBtr0073217 4173388 4173789 TGTGAG 6mer2-7 dme-miR-1003-3p 3L + 4173681 4173762 3'utr Ero1L FlyBase G21190.1 GTAAGTTAGCATAGTATTTATTGTATCTGGAGGAGTTTGTGAGCGGAACTTAATGAGCAAGTAAACGCATTGTGCAATACCA 11 4173718 0.983941633 7 9 77 0.785714286 1.041392685 0.214285714 0.181818182 0.357142857 11 3 0 11 3L:4173681-4173762 6 7 3124 FBgn0261274 553.5433333 32.04333333 49.15666667 0.012645803 0.218454177 0.142401844 -1 0 -0.5 0.01 dme-miR-2b-2-5p 6mer3-8 TTGAAG 3L 4223416 4223421 + 3L_4223416_4223421_+ 0.999999994 0.999999999 0.999999997 0 CG43367 FBtr0307311|FBtr0307309|FBtr0307312|FBtr0307310 4222591|4222591|4222591|4222591 4224003|4224003|4224003|4224003 3L + 4223397 4223473 3'utr CG43367 FlyBase G27991.1 ATTAACAGAGCATTTCCAATTGAAGTATTATCACCACAGCACGATCACAGTCCGTCCACACAGATCCGAGATCCGCA 45 4223416 0.921664097 5 42 291 0.93877551 1.361727836 0.163265306 0.088888889 0.163265306 45 2 1 46 3L:4223397-4223473 6 CG43367 FBtr0307310|FBtr0307312|FBtr0307309|FBtr0307311 4222591|4222591|4222591|4222591 4224003|4224003|4224003|4224003 TTGAAG 6mer3-8 dme-miR-2b-2-5p 3L + 4223399 4223467 3'utr CG43367 FlyBase G21201.1 TAACAGAGCATTTCCAATTGAAGTATTATCACCACAGCACGATCACAGTCCGTCCACACAGATCCGAGA 16 4223416 0.831134552 4 12 91 0.782608696 1.255272505 0.217391304 0.25 0.47826087 16 5 0 18 3L:4223399-4223467 6 22 3125 FBgn0263110 1107.403333 13.19666667 20.14666667 0.019866294 1.667087648 1.091992058 0 0 0 0.01 dme-miR-932-5p 6mer3-8 GGAATT 3L 4245849 4245854 + 3L_4245849_4245854_+ 1 1 1 0 pav FBtr0073227 4245833 4246233 3L + 4245821 4245978 stop_codon pav FlyBase G28008.1 AGTCGAAAATCTAAAAATGACTCAGCGTGGAATTCTCAAAGTCAATTACCCATTTAGTTCATAGTTACTTAGTTTCCATAACTTAAATTTAAGTTTATTACTCACCCACTTCGGTTTTTGGAGTTGAATCGCATTGAAGTGATTTGTTTGATTAAAGA 54 4245853 0.970816333 21 51 408 0.953125 1.30820858 0.28125 0.148148148 0.28125 54 1 2 61 3L:4245821-4245978 6 pav FBtr0073227 4245833 4246233 GGAATT 6mer3-8 dme-miR-932-5p 3L + 4245839 4245870 3'utr pav FlyBase G21213.1 GACTCAGCGTGGAATTCTCAAAGTCAATTACC 5 4245853 0.98212979 3 3 17 0.833333333 0.698970004 0.5 0.2 0.333333333 5 1 0 5 3L:4245839-4245870 6 12 3126 FBgn0011692 1162 44.12333333 67.86333333 0.010327022 0.271964947 0.176825974 -4 -4 -4 0.01 dme-miR-968-5p 6mer3-8 ACTACT 3L 4246123 4246128 + 3L_4246123_4246128_+ 0.999999997 1 0.999999999 0 pav FBtr0073227 4245833 4246233 3L + 4246050 4246137 3'utr pav FlyBase G28010.1 AAATAGTCGGTACCCGGAGGGTATCTGCCAAGAGCAGTTGTTAGAAACTATCCAAGCATCGTCCAATCATAGAACTACTCTAGTGTTA 30 4246116 0.860086798 12 28 159 0.944444444 1.230448921 0.083333333 0.2 0.333333333 30 1 1 34 3L:4246050-4246137 6 pav FBtr0073227 4245833 4246233 ACTACT 6mer3-8 dme-miR-968-5p 3L + 4246080 4246139 3'utr pav FlyBase G21215.1 AGAGCAGTTGTTAGAAACTATCCAAGCATCGTCCAATCATAGAACTACTCTAGTGTTATT 13 4246117 0.952341275 8 13 63 1 1.322219295 0 0.538461538 0.714285714 13 0 0 21 3L:4246080-4246139 6 8.5 3127 FBgn0011692 1162 44.12333333 67.86333333 0.007314974 0.192641837 0.125251731 7 6 6.5 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 3L 4246452 4246458 - 3L_4246452_4246458_- 0.823349562 0.823349562 0.823349562 0 ago FBtr0073247|FBtr0073246|FBtr0073245 4246341|4246341|4246341 4247475|4247475|4247475 3L - 4246433 4246478 3'utr ago FlyBase G34293.1 CGAACATATATTTTAATTATAGACTGATTTATTAGTAATTGAAATT 138 4246461 0.629084531 14 130 1594 0.946428571 1.72427587 0.029761905 0.18115942 0.327380952 138 7 2 159 3L:4246433-4246478 7 ago FBtr0073246|FBtr0073245|FBtr0073247 4246341|4246341|4246341 4247475|4247475|4247475 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 4246425 4246490 3'utr ago FlyBase G25945.1 GAAATCATTAAGCGAACATATATTTTAATTATAGACTGATTTATTAGTAATTGAAATTAATCTACA 117 4246462 0.992941524 15 109 1278 0.942307692 1.866287339 0.038461538 0.256410256 0.442307692 117 8 1 147 3L:4246425-4246490 7 125 3128 FBgn0041171 1117.28 25.37333333 39.01 0.111878849 4.92643195 3.204306588 3 4 3.5 0.01 dme-miR-184-5p 6mer3-8 TGATAA 3L 4247009 4247014 - 3L_4247009_4247014_- 1 1 1 0 ago FBtr0073247|FBtr0073246|FBtr0073245 4246341|4246341|4246341 4247475|4247475|4247475 3L - 4246899 4247112 3'utr ago FlyBase G34295.1 ACGTTGCTTCATAGCCAAAATTCGTTTTCCACCGTAGAATAATTTCGCTTCTTAGTTTTTATTGCTATTGTGTATATGGCAAGAATCGATTACCTTAATGATAATATTATGATTATGATTACGTATTATAAAGCGCAGATTTACAACTGCAGATGCAAATAATTGTTTCGCGTCGTGTGAACCTGAGAGAGCGTTTATGAGAACAGAGCTTTAT 56 4247023 0.830070912 27 54 417 0.971014493 1.826074803 0.188405797 0.160714286 0.31884058 56 2 0 67 3L:4246899-4247112 6 ago FBtr0073246|FBtr0073245|FBtr0073247 4246341|4246341|4246341 4247475|4247475|4247475 TGATAA 6mer3-8 dme-miR-184-5p 3L - 4247007 4247059 3'utr ago FlyBase G25949.1 AGTTTTTATTGCTATTGTGTATATGGCAAGAATCGATTACCTTAATGATAATA 20 4247023 0.780911011 5 15 136 0.870967742 1.431363764 0.096774194 0.45 0.64516129 20 4 0 27 3L:4247007-4247059 6 13.5 3129 FBgn0041171 1117.28 25.37333333 39.01 0.012082916 0.532054651 0.346065112 9 9 9 0.01 dme-miR-1008-3p 7mer-A1 GCTGTGA 3L 4247144 4247150 - 3L_4247144_4247150_- 0.823346972 0.823349139 0.823348055 1.48E-06 ago FBtr0073247|FBtr0073246|FBtr0073245 4246341|4246341|4246341 4247475|4247475|4247475 3L - 4247115 4247181 3'utr ago FlyBase G34296.1 AGGGTAGTCGGGTGGTCGGGGTGTGGCTGTGGCTGTGAGTGTATATTGTTAATAATACCCTTTTAAA 40 4247152 0.984785573 7 39 315 0.975609756 1.301029996 0.414634146 0.025 0.048780488 40 0 1 40 3L:4247115-4247181 7 ago FBtr0073246|FBtr0073245|FBtr0073247 4246341|4246341|4246341 4247475|4247475|4247475 GCTGTGA 7mer-A1 dme-miR-1008-3p 3L - 4247115 4247181 3'utr ago FlyBase G25950.1 AGGGTAGTCGGGTGGTCGGGGTGTGGCTGTGGCTGTGAGTGTATATTGTTAATAATACCCTTTTAAA 42 4247152 0.979895396 7 42 308 1 1.755874856 0.666666667 0.285714286 0.473684211 42 0 0 57 3L:4247115-4247181 7 38.5 3130 FBgn0041171 1117.28 25.37333333 39.01 0.034458685 1.51734104 0.986926429 2 2 2 0.01 dme-miR-304-5p 6mer2-7 GAGATT 3L 4247371 4247376 - 3L_4247371_4247376_- 1 1 1 0 ago FBtr0073247|FBtr0073246|FBtr0073245 4246341|4246341|4246341 4247475|4247475|4247475 3L - 4247343 4247423 3'utr ago FlyBase G34297.1 AGGCGGTGAACGGTCAGGGACGGGGCAGCTAGTATACAGCTTCAAGCGAGATTTCATTGCAAACTCATCCAAACACAGAAA 93 4247372 0.969633283 8 90 612 0.961538462 2 0.048076923 0.096774194 0.192307692 93 4 0 100 3L:4247343-4247423 6 ago FBtr0073246|FBtr0073245|FBtr0073247 4246341|4246341|4246341 4247475|4247475|4247475 GAGATT 6mer2-7 dme-miR-304-5p 3L - 4247345 4247425 3'utr ago FlyBase G25952.1 TCAGGCGGTGAACGGTCAGGGACGGGGCAGCTAGTATACAGCTTCAAGCGAGATTTCATTGCAAACTCATCCAAACACAGA 68 4247372 0.911390196 8 60 415 0.921568627 1.672097858 0.049019608 0.352941176 0.568627451 68 7 1 94 3L:4247345-4247425 6 68 3131 FBgn0041171 1117.28 25.37333333 39.01 0.060862094 2.679978981 1.743142784 -4 -4 -4 0.01 dme-miR-7-5p 6mer3-8 GTCTTC 3L 4261591 4261596 + 3L_4261591_4261596_+ 1 1 1 0 CG1309 FBtr0073229 4261471 4261643 3L + 4261525 4261614 3'utr CG1309 FlyBase G28023.1 TTTAGTAATTTTTGCCTTCTGACTGCTTATTAAATTATTCTAACTGGGAACAGCCGGGTAGCTGGTGTCTTCTGAACTGGTGTGAAATTA 32 4261604 0.883857053 15 32 298 1 1.556302501 0.194444444 0.09375 0.194444444 32 0 0 36 3L:4261525-4261614 6 CG1309 FBtr0073229 4261471 4261643 GTCTTC 6mer3-8 dme-miR-7-5p 3L + 4261569 4261613 3'utr CG1309 FlyBase G21222.1 TGGGAACAGCCGGGTAGCTGGTGTCTTCTGAACTGGTGTGAAATT 13 4261604 0.983827713 7 13 109 1 1.176091259 0.333333333 0.153846154 0.266666667 13 0 0 15 3L:4261569-4261613 6 11 3132 FBgn0035519 279.17 18.09 27.51666667 0.039402515 0.608070757 0.399757723 -13 -13 -13 0.01 dme-miR-2535b-3p 6mer3-8 CCGTGA 3L 4286641 4286646 + 3L_4286641_4286646_+ 1 1 1 0 CG1316 FBtr0073233 4285917 4286865 3L + 4286603 4286703 3'utr CG1316 FlyBase G28041.1 ATGTGTACTCATACCGCTTAGGGGACTTTTGAATCTACCCGTGATACAGAAACGAACTCTCTGTGTAACTTGAACTCTTACAAACTTATTCCGACGAGATT 29 4286670 0.866099862 11 27 190 0.933333333 1.447158031 0.2 0.034482759 0.066666667 29 2 0 28 3L:4286603-4286703 6 CG1316 FBtr0073233 4285917 4286865 CCGTGA 6mer3-8 dme-miR-2535b-3p 3L + 4286593 4286705 3'utr CG1316 FlyBase G21232.1 TGTCGTATATATGTGTACTCATACCGCTTAGGGGACTTTTGAATCTACCCGTGATACAGAAACGAACTCTCTGTGTAACTTGAACTCTTACAAACTTATTCCGACGAGATTCA 16 4286632 0.981451354 11 16 117 1 1.397940009 0.08 0.5 0.68 16 0 0 25 3L:4286593-4286705 6 4 3133 FBgn0035526 1078.71 59.01666667 90.48 0.003708133 0.067777464 0.044208665 -29 9 -10 0.01 dme-miR-79-3p 6mer2-7 AGCTTT 3L 4291475 4291480 - 3L_4291475_4291480_- 1 1 1 0 CG15012 FBtr0300776 4291206 4291513 3L - 4291407 4291510 3'utr CG15012 FlyBase G34336.1 TTCCATTCAAATTATTGCACAAGGGAACGCAGCTTTTAGTATCTAGACTCATTACGTACATAATCAGGAGTCCAAGGAGTTTATGCTTGAGGCCGAGGACACCA 63 4291475 0.973808782 11 60 372 0.96 1.857332496 0.133333333 0.174603175 0.306666667 63 3 0 72 3L:4291407-4291510 6 CG15012 FBtr0300776 4291206 4291513 AGCTTT 6mer2-7 dme-miR-79-3p 3L - 4291404 4291502 3'utr CG15012 FlyBase G25978.1 AAATTATTGCACAAGGGAACGCAGCTTTTAGTATCTAGACTCATTACGTACATAATCAGGAGTCCAAGGAGTTTATGCTTGAGGCCGAGGACACCATCA 41 4291476 0.972817375 12 39 234 0.970588235 1.819543936 0.073529412 0.463414634 0.676470588 41 2 0 66 3L:4291404-4291502 6 38 3134 FBgn0035528 717.9933333 105.47 160.88 0.052925283 0.360292026 0.236200895 -5 -4 -4.5 0.01 dme-miR-995-5p 6mer3-8 AATTCG 3L 4293214 4293219 + 3L_4293214_4293219_+ 1 1 1 0 CG1319 FBtr0300775 4293169 4293432 3L + 4293152 4293246 stop_codon CG1319 FlyBase G28047.1 TGACGCACGTGCCGCGTAGATAGACACCACCACTGTTATCAATTGTTACAAATTTGAGTGCTAATTCGCTTTAGTTCAACCTAGATGTAGTCAAT 43 4293206 0.98958656 13 41 398 0.958333333 1.662757832 0.083333333 0.11627907 0.208333333 43 2 0 46 3L:4293152-4293246 6 CG1319 FBtr0300775 4293169 4293432 AATTCG 6mer3-8 dme-miR-995-5p 3L + 4293158 4293305 stop_codon CG1319 FlyBase G21236.2 ACGTGCCGCGTAGATAGACACCACCACTGTTATCAATTGTTACAAATTTGAGTGCTAATTCGCTTTAGTTCAACCTAGATGTAGTCAATATTTTTGAACGAAATCGTATGTATTGTCCCAGGGACACAAACCTCAGGCGGCTATAATG 58 4293206 0.869250937 20 53 410 0.884615385 1.838849091 0.064102564 0.25862069 0.448717949 58 9 0 69 3L:4293158-4293305 6 25.5 3135 FBgn0035529 158.3333333 23.22 35.56333333 0.161052632 1.098191214 0.71703065 8 8 8 0.01 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3L 4320958 4320965 + 3L_4320958_4320965_+ 0.63113665 0.63113665 0.63113665 0 CG32250 FBtr0073287|FBtr0306092 4320948|4320948 4321109|4321109 3L + 4320907 4320981 stop_codon CG32250 FlyBase G28064.1 AAAGATAGCCGGCACCGTTGGCATGCTGCTTAAGCGCAACTGAAAAGAGGCTCTAGTCAACAAGTAGTTTTACTC 52 4320960 0.921412227 9 52 204 1 1.785329835 0.131147541 0.115384615 0.245901639 52 0 0 61 3L:4320907-4320981 8 CG32250 FBtr0306092|FBtr0073287 4320948|4320948 4321109|4321109 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L + 4320909 4320981 stop_codon CG32250 FlyBase G21248.1 AGATAGCCGGCACCGTTGGCATGCTGCTTAAGCGCAACTGAAAAGAGGCTCTAGTCAACAAGTAGTTTTACTC 29 4320960 0.942728198 4 29 123 1 1.602059991 0.05 0.275862069 0.475 29 0 0 40 3L:4320909-4320981 8 35.5 3136 FBgn0052250 102.0233333 9.57 14.53333333 0.347959617 3.709508882 2.44266055 -2 -2 -2 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 3L 434196 434201 - 3L_434196_434201_- 1 1 1 0 klar FBtr0110818|FBtr0110818 434081|434081 435117|435117 3L - 434189 434282 3'utr klar FlyBase G33021.1 AAAATATCTCTTAGGTTCGTGTTTGGAATTCCTAGACTTAGTTTATGGTTTACTCACTCCTGGCAGATGATCATTGTAATATACTTATAAGGTT 32 434210 0.741794928 12 31 286 0.948717949 1.568201724 0.205128205 0.1875 0.333333333 32 2 0 37 3L:434189-434282 6 klar FBtr0110818|FBtr0110818 434081|434081 435117|435117 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 3L - 434190 434282 3'utr klar FlyBase G24986.1 AAAATATCTCTTAGGTTCGTGTTTGGAATTCCTAGACTTAGTTTATGGTTTACTCACTCCTGGCAGATGATCATTGTAATATACTTATAAGGT 29 434209 0.699419806 11 26 225 0.860465116 1.091080469 0.11627907 0.413793103 0.604651163 29 4 2 37 3L:434190-434282 6 8.5 3137 FBgn0001316 7969.913333 135.5066667 207.9333333 0.001066511 0.062727541 0.040878487 9 8 8.5 0.01 dme-miR-252-5p 8mer-m1 GTACTTAG 3L 434769 434776 - 3L_434769_434776_- 0.636789085 0.636789085 0.636789085 0 klar FBtr0333851|FBtr0333850|FBtr0110818|FBtr0333852|FBtr0343527|FBtr0112807|FBtr0072565 434297|434297|434081|434297|434297|434297|434297 435117|435117|435117|435117|435117|435117|435117 3L - 434699 434801 3'utr klar FlyBase G33023.1 TGCTGTTCGATTGAACGCTGAATATGTACTTAGGCGAGGAGCAGACGATGCCCAGCCACGTGTAAACTGCCGCATAAAGGAACAAAGGGGCGGATCGTCCCCC 481 434777 0.969575209 10 472 2650 0.981916817 2.433769834 0.253164557 0.130977131 0.244122966 481 9 1 543 3L:434699-434801 8 klar FBtr0333852|FBtr0343527|FBtr0112807|FBtr0072565|FBtr0110818|FBtr0333851|FBtr0333850 434297|434297|434297|434297|434081|434297|434297 435117|435117|435117|435117|435117|435117|435117 GTACTTAG 8mer-m1 dme-miR-252-5p 3L - 434721 434801 3'utr klar FlyBase G24989.1 TGCTGTTCGATTGAACGCTGAATATGTACTTAGGCGAGGAGCAGACGATGCCCAGCCACGTGTAAACTGCCGCATAAAGGA 268 434777 0.77170677 7 264 1435 0.992822967 2.618048097 0.265550239 0.402985075 0.61722488 268 3 0 415 3L:434721-434801 8 366.5 3138 FBgn0001316 7969.913333 135.5066667 207.9333333 0.045985444 2.704663977 1.762584162 1 1 1 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 4403037 4403042 + 3L_4403037_4403042_+ 1 1 1 0 slow FBtr0073291|FBtr0073292 4402842|4402842 4403181|4403181 3L + 4402990 4403060 3'utr slow FlyBase G28068.1 CGGGCTATTAGTACTTAAGCGAGAACGTGTGTCATAAATGTATCGAGATGTGAAGTTTTAGACGTAAGCGC 7 4403046 0.984441365 4 7 51 1 0.903089987 0.375 0.142857143 0.25 7 0 0 8 3L:4402990-4403060 6 slow FBtr0073291|FBtr0073292 4402842|4402842 4403181|4403181 ATGTGA 6mer3-8 dme-miR-1003-3p 3L + 4402990 4403063 3'utr slow FlyBase G21250.1 CGGGCTATTAGTACTTAAGCGAGAACGTGTGTCATAAATGTATCGAGATGTGAAGTTTTAGACGTAAGCGCACC 7 4403046 0.960993693 4 7 36 1 0.954242509 0.333333333 0.285714286 0.444444444 7 0 0 9 3L:4402990-4403063 6 4.5 3139 FBgn0035539 0.666666667 0.043333333 0.066666667 6.75 103.8461538 67.5 -9 -9 -9 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3L 4405020 4405026 + 3L_4405020_4405026_+ 0.521223855 0.521223855 0.521223855 0 Syx17 FBtr0073293 4404847 4405168 3L + 4405001 4405037 3'utr Syx17 FlyBase G28070.2 TAGTTCAATATCCCCATTTTGTGATTTTCCACGTGCA 120 4405019 0.602524336 9 113 1180 0.946745562 1.602059991 0.01183432 0.275 0.485207101 120 6 3 160 3L:4405001-4405037 7 Syx17 FBtr0073293 4404847 4405168 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 4404932 4405036 stop_codon Syx17 FlyBase G21253.1 AGCCACCAACGGAGTGATTTGCAGCGTGCGCAGCTATTGTTCCGTTCAGTAGAAATTTGACCACGATTTTAGTTCAATATCCCCATTTTGTGATTTTCCACGTGC 103 4405019 0.989410739 11 101 981 0.981012658 2.190331698 0.056962025 0.398058252 0.607594937 103 3 0 155 3L:4404932-4405036 7 100 3140 FBgn0035540 155.05 12.22333333 18.79666667 0.644953241 8.181074448 5.320092215 1 1 1 0.01 dme-miR-304-5p 6mer2-7 GAGATT 3L 4405293 4405298 - 3L_4405293_4405298_- 1 1 1 0 CG15019 FBtr0073335|FBtr0113139 4405212|4405125 4405360|4405360 3L - 4405263 4405309 3'utr CG15019 FlyBase G34354.1 GCTTAGTTTAGGAGATTTTGTAGGCTTTTTCTACAAAGATGTTATAG 11 4405281 0.989105411 6 11 103 1 1.113943352 0.384615385 0.181818182 0.307692308 11 0 0 13 3L:4405263-4405309 6 CG15019 FBtr0113139|FBtr0073335 4405125|4405212 4405360|4405360 GAGATT 6mer2-7 dme-miR-304-5p 3L - 4405272 4405321 3'utr CG15019 FlyBase G25984.1 TTATAAGTCCTCGCTTAGTTTAGGAGATTTTGTAGGCTTTTTCTACAAAG 14 4405282 0.662701651 7 12 133 0.863636364 0.67669361 0.090909091 0.428571429 0.636363636 14 0 3 19 3L:4405272-4405321 6 8.5 3141 FBgn0035541 1035.333333 200.3066667 308.5366667 0.008209916 0.042434933 0.0275494 -17 -16 -16.5 0.01 dme-miR-8-3p 6mer2-7 AGTATT 3L 4420031 4420036 + 3L_4420031_4420036_+ 1 1 1 0 DOR FBtr0073295|FBtr0073294 4419903|4419903 4420648|4420648 3L + 4419881 4420051 stop_codon DOR FlyBase G28084.1 AACCGCAGCAAGTGCTGCTACTAGGCGGCCACCACCCACGCCACCCACAACCACCCAACACCAACACCACCACCATGCCTCCAGCGCTCGAGGAGCCGACGGAGCCGTAGGAGGAGCATTACAATCATGGCAGGCGACGCGATTTTAATTAGTATTTTAACCTTACCCCCA 85 4420026 0.964096258 17 81 503 0.96039604 1.685741739 0.188118812 0.152941176 0.287128713 85 3 1 97 3L:4419881-4420051 6 DOR FBtr0113141|FBtr0308033|FBtr0073296|FBtr0113140|FBtr0308034|FBtr0073295|FBtr0073294 4419903|4419903|4419903|4419903|4419903|4419903|4419903 4420266|4420266|4420266|4420266|4420266|4420648|4420648 AGTATT 6mer2-7 dme-miR-8-3p 3L + 4419980 4420058 3'utr DOR FlyBase G21268.1 CGGAGCCGTAGGAGGAGCATTACAATCATGGCAGGCGACGCGATTTTAATTAGTATTTTAACCTTACCCCCAGATGAAA 52 4420037 0.799027114 12 50 356 0.961038961 1.86923172 0.142857143 0.384615385 0.584415584 52 3 0 74 3L:4419980-4420058 6 33.5 3142 FBgn0035542 115 6.26 9.503333333 0.291304348 5.3514377 3.52507892 5 -6 -0.5 0.01 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 4420112 4420118 + 3L_4420112_4420118_+ 0.823349562 0.823349562 0.823349562 0 DOR FBtr0073295|FBtr0073294 4419903|4419903 4420648|4420648 3L + 4420059 4420174 3'utr DOR FlyBase G28084.2 CGAGAGAAAATTCGCAAAAAAAGGAAAAATGCCACAAAAATATCAAAAATCTAGCAGCTACAAGAAACGCATATGTTTAATTAACTAAACTTAACAAATACTTGTGTAAAAACGAA 59 4420110 0.964004218 10 52 180 0.875 1.271066772 0.40625 0.084745763 0.15625 59 6 2 56 3L:4420059-4420174 7 DOR FBtr0113141|FBtr0308033|FBtr0073296|FBtr0113140|FBtr0308034|FBtr0073295|FBtr0073294 4419903|4419903|4419903|4419903|4419903|4419903|4419903 4420266|4420266|4420266|4420266|4420266|4420648|4420648 GCAGCTA 7mer-A1 dme-miR-980-3p 3L + 4420060 4420166 3'utr DOR FlyBase G21268.2 GAGAGAAAATTCGCAAAAAAAGGAAAAATGCCACAAAAATATCAAAAATCTAGCAGCTACAAGAAACGCATATGTTTAATTAACTAAACTTAACAAATACTTGTGTA 28 4420110 0.974409107 9 22 84 0.785714286 1.217483944 0.214285714 0.285714286 0.523809524 28 8 1 33 3L:4420060-4420166 7 30.5 3143 FBgn0035542 115 6.26 9.503333333 0.265217391 4.872204473 3.20940021 2 2 2 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3L 4539056 4539062 + 3L_4539056_4539062_+ 0.521223855 0.521223855 0.521223855 0 CG11353 FBtr0073309|FBtr0073308 4538997|4538997 4539270|4539270 3L + 4539025 4539085 3'utr CG11353 FlyBase G28099.1 AAGGTCACCGCACACGCCTCCATCTGACAATTGTGATTGCTTTCATGTACAACTAATCATT 63 4539055 0.825982567 7 58 502 0.934210526 1.073107098 0.026315789 0.174603175 0.315789474 63 0 5 71 3L:4539025-4539085 7 CG11353 FBtr0073308|FBtr0073309 4538997|4538997 4539270|4539270 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 4539026 4539093 3'utr CG11353 FlyBase G21280.1 AGGTCACCGCACACGCCTCCATCTGACAATTGTGATTGCTTTCATGTACAACTAATCATTATTATCGA 57 4539062 0.98701345 8 54 474 0.975308642 1.897627091 0 0.263157895 0.481481481 57 2 0 79 3L:4539026-4539093 7 55 3144 FBgn0035557 9.256666667 0.366666667 0.553333333 5.941663666 150 99.39759036 1 -6 -2.5 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 4552958 4552965 + 3L_4552958_4552965_+ 0.500120318 0.500120318 0.500120318 0 CG11357 FBtr0304987|FBtr0113142|FBtr0073310|FBtr0113143 4552565|4552565|4552565|4552565 4553457|4553457|4553457|4553457 3L + 4552882 4553094 3'utr CG11357 FlyBase G28116.1 AAACTCTAATAGCGGCAACAATAAACGGAGCGCATAACCTTAAGCACAACTCTTAAATCGTAAGAAAACTACAATAGTACTTAATAAACGATAAAATGATTGAAAACTGCTGAAATCAGTGAATAACCAAACCAAATATTGATTTCGATGTAGATCGCGTAACAGTGGACGGAAATATTTATTAAAAAGTATATATACGTAGGGGCAAACGAA 240 4552956 0.930647674 33 229 1274 0.959854015 1.942834494 0.145985401 0.133333333 0.240875912 240 9 2 263 3L:4552882-4553094 8 CG11357 FBtr0113143|FBtr0073310|FBtr0113142|FBtr0304987 4552565|4552565|4552565|4552565 4553457|4553457|4553457|4553457 GTACTTAA 8mer-A1 dme-miR-252-5p 3L + 4552884 4553073 3'utr CG11357 FlyBase G21296.1 ACTCTAATAGCGGCAACAATAAACGGAGCGCATAACCTTAAGCACAACTCTTAAATCGTAAGAAAACTACAATAGTACTTAATAAACGATAAAATGATTGAAAACTGCTGAAATCAGTGAATAACCAAACCAAATATTGATTTCGATGTAGATCGCGTAACAGTGGACGGAAATATTTATTAAAAAGTAT 164 4552956 0.967506674 22 154 818 0.95703125 1.91204483 0.12109375 0.420731707 0.62890625 164 9 2 245 3L:4552884-4553073 8 52 3145 FBgn0035558 4857.766667 204.6066667 314.1433333 0.010704508 0.254146167 0.165529535 2 2 2 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 4553012 4553017 + 3L_4553012_4553017_+ 1 0.999999921 0.999999961 7.07E-08 CG11357 FBtr0304987|FBtr0113142|FBtr0073310|FBtr0113143 4552565|4552565|4552565|4552565 4553457|4553457|4553457|4553457 3L + 4552882 4553094 3'utr CG11357 FlyBase G28116.1 AAACTCTAATAGCGGCAACAATAAACGGAGCGCATAACCTTAAGCACAACTCTTAAATCGTAAGAAAACTACAATAGTACTTAATAAACGATAAAATGATTGAAAACTGCTGAAATCAGTGAATAACCAAACCAAATATTGATTTCGATGTAGATCGCGTAACAGTGGACGGAAATATTTATTAAAAAGTATATATACGTAGGGGCAAACGAA 240 4553021 0.930647674 33 229 1274 0.959854015 1.942834494 0.145985401 0.133333333 0.240875912 240 9 2 263 3L:4552882-4553094 6 CG11357 FBtr0113143|FBtr0073310|FBtr0113142|FBtr0304987 4552565|4552565|4552565|4552565 4553457|4553457|4553457|4553457 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 4552884 4553073 3'utr CG11357 FlyBase G21296.1 ACTCTAATAGCGGCAACAATAAACGGAGCGCATAACCTTAAGCACAACTCTTAAATCGTAAGAAAACTACAATAGTACTTAATAAACGATAAAATGATTGAAAACTGCTGAAATCAGTGAATAACCAAACCAAATATTGATTTCGATGTAGATCGCGTAACAGTGGACGGAAATATTTATTAAAAAGTAT 164 4553021 0.967506674 22 154 818 0.95703125 1.91204483 0.12109375 0.420731707 0.62890625 164 9 2 245 3L:4552884-4553073 6 28 3146 FBgn0035558 4857.766667 204.6066667 314.1433333 0.005763966 0.136847936 0.089131288 -9 -9 -9 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3L 4553239 4553245 + 3L_4553239_4553245_+ 0.808818233 0.808818836 0.808818535 4.24E-07 CG11357 FBtr0304987|FBtr0304987|FBtr0113142|FBtr0113142|FBtr0073310|FBtr0073310|FBtr0113143|FBtr0113143 4552565|4552565|4552565|4552565|4552565|4552565|4552565|4552565 4553457|4553457|4553457|4553457|4553457|4553457|4553457|4553457 3L + 4553206 4553361 3'utr CG11357 FlyBase G28118.1 AGAATCTTCATATGCATTACATTTAGTCAGATATACTTAATGAATAAGATAAGTGGGAACAGAAATGGCAGGAACGTTAACAAGAAATATCAAAAACAAATAGCAAATTGTACGGTCCGAGAACGCTAAAATCGATGAACGAACGAAAATGGTAAC 43 4553226 0.978669685 15 39 250 0.931034483 1.255272505 0.086206897 0.255813953 0.448275862 43 2 2 54 3L:4553206-4553361 7 CG11357 FBtr0113143|FBtr0113143|FBtr0073310|FBtr0073310|FBtr0113142|FBtr0113142|FBtr0304987|FBtr0304987 4552565|4552565|4552565|4552565|4552565|4552565|4552565|4552565 4553457|4553457|4553457|4553457|4553457|4553457|4553457|4553457 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3L + 4553205 4553284 3'utr CG11357 FlyBase G21298.1 CAGAATCTTCATATGCATTACATTTAGTCAGATATACTTAATGAATAAGATAAGTGGGAACAGAAATGGCAGGAACGTTA 25 4553227 0.978397556 8 22 152 0.891891892 1.041392685 0.162162162 0.32 0.540540541 25 2 2 33 3L:4553205-4553284 7 16.5 3147 FBgn0035558 4857.766667 204.6066667 314.1433333 0.003396623 0.080642534 0.052523795 13 12 12.5 0.01 dme-miR-277-3p 6mer2-7 GCATTT 3L 4593187 4593192 - 3L_4593187_4593192_- 1 1 1 0 Src64B FBtr0343995|FBtr0304989|FBtr0304990 4592893|4592893|4592445 4594640|4594640|4594640 3L - 4593171 4593217 3'utr Src64B FlyBase G34374.1 TTCTGTAGCATAAAACCAAAGTTTAGCATTTCGTATTGAGATATATG 14 4593196 0.779006446 4 12 79 0.857142857 1.255272505 0 0.285714286 0.523809524 14 3 0 18 3L:4593171-4593217 6 Src64B FBtr0304989|FBtr0304990|FBtr0343995 4592893|4592445|4592893 4594640|4594640|4594640 GCATTT 6mer2-7 dme-miR-277-3p 3L - 4593174 4593229 3'utr Src64B FlyBase G25997.1 ATTGTGTGCACATTCTGTAGCATAAAACCAAAGTTTAGCATTTCGTATTGAGATAT 10 4593196 0.974891474 3 10 67 1 1.113943352 0.307692308 0.3 0.461538462 10 0 0 13 3L:4593174-4593229 6 11 3148 FBgn0262733 767.5933333 20.04333333 30.95666667 0.014330505 0.54881091 0.355335415 4 4 4 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 3L 4629397 4629402 + 3L_4629397_4629402_+ 0.9999999 1 0.99999995 7.07E-08 Rpd3 FBtr0073317|FBtr0073317 4629114|4629114 4629467|4629467 3L + 4629368 4629407 3'utr Rpd3 FlyBase G28132.1 AGTGTATAGCTAAGCAAAAAGTGAATGCATACTTACAAGC 9 4629396 0.929642568 3 9 35 1 1.079181246 0 0.333333333 0.5 9 0 0 12 3L:4629368-4629407 6 Rpd3 FBtr0073317|FBtr0073317 4629114|4629114 4629467|4629467 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 3L + 4629343 4629427 3'utr Rpd3 FlyBase G21307.1 AAACACAATTTATTTTAAGATCGAAAGTGTATAGCTAAGCAAAAAGTGAATGCATACTTACAAGCGATCCAATGTGGCGAATAAC 12 4629399 0.957794195 7 10 50 1 1.079181246 0 0.2 0.333333333 10 0 0 12 3L:4629343-4629427 6 6.5 3149 FBgn0015805 1165.29 66.60666667 101.9933333 0.005578011 0.097587829 0.063729656 1 -2 -0.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 5144303 5144308 - 3L_5144303_5144308_- 1 1 1 0 CG10671 FBtr0077177|FBtr0077178 5144080|5144080 5144395|5144395 3L - 5144228 5144323 3'utr CG10671 FlyBase G34482.1 CGGATTGGAATTTATACCAAATTTTTGTATATTCAGCAACGATGATATGAAACGATGATGATATTACTAAGCAAGCAGCCGAGGCTGGCACTGGAT 10 5144301 0.98924799 7 8 59 0.866666667 1.113943352 0.2 0.3 0.533333333 10 2 0 13 3L:5144228-5144323 6 CG10671 FBtr0077178|FBtr0077177 5144080|5144080 5144395|5144395 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 5144291 5144345 3'utr CG10671 FlyBase G26060.1 GAAGGAATTGATAGTTAGGTGACGGATTGGAATTTATACCAAATTTTTGTATATT 6 5144301 0.992998419 3 5 54 0.6 0.77815125 0.4 0.333333333 0.6 6 4 0 6 3L:5144291-5144345 6 4 3150 FBgn0035586 278.5933333 18.25333333 27.90333333 0.014357845 0.219138057 0.143352049 -7 -7 -7 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 3L 5158850 5158856 - 3L_5158850_5158856_- 0.823346752 0.823349562 0.823348157 1.98E-06 shep FBtr0308859|FBtr0077174|FBtr0333288|FBtr0333289 5157906|5155819|5155819|5158793 5162466|5162466|5162466|5162466 3L - 5158828 5158871 5'utr shep FlyBase G34491.1 ACGATTATTTGCTTTAGACTGACTACGAACTGAAACTGTAACAA 9 5158858 0.976034573 6 9 65 1 1.041392685 0.181818182 0.111111111 0.272727273 9 0 0 11 3L:5158828-5158871 7 shep FBtr0333288|FBtr0333289|FBtr0308859|FBtr0077174 5155819|5158793|5157906|5155819 5162466|5162466|5162466|5162466 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 5158807 5158869 5'utr shep FlyBase G26066.1 GATTATTTGCTTTAGACTGACTACGAACTGAAACTGTAACAATAACAACAAATGCAGGATTGT 7 5158858 0.982139748 4 7 51 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 3L:5158807-5158869 7 7 3151 FBgn0052423 9763.176667 275.8933333 425.4466667 0.00071698 0.025372124 0.016453296 2 2 2 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3L 5159263 5159269 - 3L_5159263_5159269_- 0.521223855 0.521223855 0.521223855 0 shep FBtr0308859|FBtr0077174|FBtr0333288|FBtr0333289 5157906|5155819|5155819|5158793 5162466|5162466|5162466|5162466 3L - 5159254 5159287 5'utr shep FlyBase G34492.1 AAGCCTAAGCATTGTATTTGTGATTTTTTCGAAT 23 5159270 0.666961311 4 21 237 0.966666667 1.462397998 0.033333333 0.217391304 0.4 23 1 0 29 3L:5159254-5159287 7 shep FBtr0333288|FBtr0333289|FBtr0308859|FBtr0077174 5155819|5158793|5157906|5155819 5162466|5162466|5162466|5162466 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 5159251 5159283 5'utr shep FlyBase G26067.1 CTAAGCATTGTATTTGTGATTTTTTCGAATGTT 6 5159270 0.71937558 4 6 72 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3L:5159251-5159283 7 13.5 3152 FBgn0052423 9763.176667 275.8933333 425.4466667 0.001382747 0.048931954 0.031731357 1 1 1 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3L 5161192 5161197 - 3L_5161192_5161197_- 1 1 1 0 shep FBtr0308859|FBtr0077172|FBtr0077174|FBtr0333287|FBtr0333288|FBtr0077173|FBtr0333289|FBtr0301599 5157906|5160684|5155819|5160684|5155819|5160684|5158793|5160684 5162466|5162466|5162466|5162466|5162466|5162466|5162466|5162466 3L - 5161169 5161215 3'utr shep FlyBase G34499.1 AAAAAGTGAAGAAAAGCAAAGACTTAACTTAAATAATAGAGAATAGT 27 5161187 0.725049732 5 19 114 0.7 1.021189299 0.266666667 0.074074074 0.166666667 27 8 1 21 3L:5161169-5161215 6 shep FBtr0333288|FBtr0077173|FBtr0333289|FBtr0301599|FBtr0308859|FBtr0077172|FBtr0077174|FBtr0333287 5155819|5160684|5158793|5160684|5157906|5160684|5155819|5160684 5162466|5162466|5162466|5162466|5162466|5162466|5162466|5162466 AAGACT 6mer3-8 dme-miR-14-3p 3L - 5161167 5161213 3'utr shep FlyBase G26073.1 AAAGTGAAGAAAAGCAAAGACTTAACTTAAATAATAGAGAATAGTTA 18 5161185 0.895529979 5 16 89 0.925925926 1.397940009 0.222222222 0.333333333 0.555555556 18 2 0 25 3L:5161167-5161213 6 21 3153 FBgn0052423 9763.176667 275.8933333 425.4466667 0.002150939 0.076116373 0.049359888 -10 -12 -11 0.01 dme-miR-7-5p 8mer-A1 GTCTTCCA 3L 5343757 5343764 - 3L_5343757_5343764_- 0.675381664 0.675381664 0.675381664 0 lama FBtr0077160|FBtr0077159|FBtr0333595|FBtr0077161 5343617|5343617|5343617|5343617 5343995|5343995|5343995|5343995 3L - 5343737 5343862 3'utr lama FlyBase G34511.1 TCGTATAATTTGTGTGTTCCTAGTTGGTACATATCTTACGTCCATAGTCTTCTAGTGTCTACTGTACTTATGTATGTATGCGTGTCCAATCGATTATTGTCTTCCAGCTGTACAGCTTTTTATTTT 166 5343765 0.778232526 21 154 1685 0.929648241 1.966141733 0.155778894 0.180722892 0.316582915 166 13 1 185 3L:5343737-5343862 8 lama FBtr0077160|FBtr0077159|FBtr0333595|FBtr0077161 5343617|5343617|5343617|5343617 5343995|5343995|5343995|5343995 GTCTTCCA 8mer-A1 dme-miR-7-5p 3L - 5343729 5343879 3'utr lama FlyBase G26083.1 TAGTGTCCTGTCTTGTCTCGTATAATTTGTGTGTTCCTAGTTGGTACATATCTTACGTCCATAGTCTTCTAGTGTCTACTGTACTTATGTATGTATGCGTGTCCAATCGATTATTGTCTTCCAGCTGTACAGCTTTTTATTTTCCGTAGGT 116 5343766 0.958983483 29 111 1139 0.971264368 2.227886705 0.172413793 0.387931034 0.591954023 116 5 0 169 3L:5343729-5343879 8 35.5 3154 FBgn0016031 538.5966667 18.35333333 28.06333333 0.065912031 1.934253542 1.264995843 1 2 1.5 0.01 dme-miR-1006-3p 7mer-m8 CGAATTT 3L 5343946 5343952 - 3L_5343946_5343952_- 0.661614704 0.661614656 0.66161468 0 lama FBtr0077160|FBtr0077159|FBtr0333595|FBtr0077161 5343617|5343617|5343617|5343617 5343995|5343995|5343995|5343995 3L - 5343917 5343969 3'utr lama FlyBase G34512.1 AACCCGTAGAACCCAATCGAATTTGTACCCAAAACCCACCTCCATCCATTTTG 13 5343953 0.953770271 6 11 62 0.9375 1.176091259 0 0.230769231 0.375 13 1 0 15 3L:5343917-5343969 7 lama FBtr0077160|FBtr0077159|FBtr0333595|FBtr0077161 5343617|5343617|5343617|5343617 5343995|5343995|5343995|5343995 CGAATTT 7mer-m8 dme-miR-1006-3p 3L - 5343917 5343954 3'utr lama FlyBase G26084.1 ATCGAATTTGTACCCAAAACCCACCTCCATCCATTTTG 7 5343923 0.684880783 4 6 31 0.7 0.84509804 0.1 0.285714286 0.5 7 3 0 7 3L:5343917-5343954 7 5 3155 FBgn0016031 538.5966667 18.35333333 28.06333333 0.009283385 0.272430076 0.178168429 1 -29 -14 0.01 dme-miR-12-5p 7mer-A1 ATACTCA 3L 5356869 5356875 - 3L_5356869_5356875_- 0.823349562 0.823349562 0.823349562 0 Klp64D FBtr0077157 5356862 5357220 3L - 5356862 5356905 3'utr Klp64D FlyBase G34519.1 GTGTGCTCTTGGCTTTTAAATAAAAATATGATACTCACACGTAA 30 5356877 0.80619775 6 29 200 0.96969697 1.505149978 0.242424242 0.1 0.181818182 30 1 0 32 3L:5356862-5356905 7 Klp64D FBtr0077157 5356862 5357220 ATACTCA 7mer-A1 dme-miR-12-5p 3L - 5356863 5356929 3'utr Klp64D FlyBase G26088.1 ATTAGGCACAAATATATAACTATTGTGTGCTCTTGGCTTTTAAATAAAAATATGATACTCACACGTA 21 5356877 0.944069004 6 21 122 1 1.505149978 0.0625 0.428571429 0.625 21 0 0 32 3L:5356863-5356929 7 16.5 3156 FBgn0004380 595.0833333 28.55 43.68333333 0.027727209 0.57793345 0.377718428 2 2 2 0.01 dme-miR-282-5p 7mer-A1 GAGGCTA 3L 5362638 5362644 + 3L_5362638_5362644_+ 0.823349562 0.823349562 0.823349562 0 CG4769 FBtr0077144 5362329 5362798 3L + 5362536 5362685 3'utr CG4769 FlyBase G28187.1 GATTCAAAATAAAACTAAATAGCTAAATCTAAAACATCCTTGGTAACCTACTGATGGTAACCAAACAAAGATCGGATCGGAAGATTCAATGAGCGGGGGATTGAGGCTACAAAGACTACAGGAGCCTAGCGAAATGATTGATGGATAATG 80 5362636 0.926462037 10 73 237 0.966292135 1.934498451 0.269662921 0.12987013 0.247191011 77 3 0 86 3L:5362536-5362685 7 CG4769 FBtr0077144 5362329 5362798 GAGGCTA 7mer-A1 dme-miR-282-5p 3L + 5362623 5362661 3'utr CG4769 FlyBase G21341.1 AATGAGCGGGGGATTGAGGCTACAAAGACTACAGGAGCC 37 5362636 0.763653892 2 36 90 0.983050847 1.462397998 0.237288136 0.405405405 0.627118644 37 0 1 58 3L:5362623-5362661 7 52 3157 FBgn0035600 2068.833333 167.37 257.41 0.025134939 0.310688893 0.202012354 2 2 2 0.01 dme-miR-33-5p 7mer-A1 AATGCAA 3L 5363602 5363608 - 3L_5363602_5363608_- 0.782911824 0.782911824 0.782911824 0 Uev1A FBtr0077156|FBtr0077155|FBtr0345026 5362882|5363184|5363148 5363874|5363874|5363874 3L - 5363511 5363659 3'utr Uev1A FlyBase G34531.2 AATGAACGTAATAAAGATCGAGTGCGGTTATTGTGGCAAGAACAACAACCAAATGCAAGCTATATACTATAAGTAAAGGGAACAGCAGCGAAAAATGCGATAGGAGCGTCACTATGAAGAGGTCGTCGTCGTCCCTTCCGTCATGAACT 137 5363606 0.991906987 14 130 743 0.961290323 2.173186268 0.180645161 0.116788321 0.219354839 137 6 0 149 3L:5363511-5363659 7 Uev1A FBtr0345026|FBtr0077155|FBtr0077156 5363148|5363184|5362882 5363874|5363874|5363874 AATGCAA 7mer-A1 dme-miR-33-5p 3L - 5363579 5363643 3'utr Uev1A FlyBase G26097.1 ATCGAGTGCGGTTATTGTGGCAAGAACAACAACCAAATGCAAGCTATATACTATAAGTAAAGGGA 63 5363606 0.987815173 8 61 288 0.97826087 1.954242509 0.163043478 0.349206349 0.554347826 63 2 0 90 3L:5363579-5363643 7 73 3158 FBgn0035601 3984.51 383.0633333 590.3 0.018320948 0.190569009 0.123665933 -2 -2 -2 0.01 dme-miR-184-3p 6mer2-7 CCGTCC 3L 5559567 5559572 - 3L_5559567_5559572_- 1 1 1 0 sinu FBtr0077136 5559468 5560751 3L - 5559503 5559625 3'utr sinu FlyBase G34543.1 ATTTTCTAAACCGAGAATTTAGCAATGTATTAAAGCAATACATACGTCTTTTACCGTCCCATATACAATAATATGTGTAACATTTTTATGTACAAACGACTTTTAGCTAAAGCGAAGAATAAT 414 5559574 0.749079152 20 401 2901 0.968565815 1.847748879 0.074656189 0.18115942 0.333988212 414 10 6 493 3L:5559503-5559625 6 sinu FBtr0077136 5559468 5560751 CCGTCC 6mer2-7 dme-miR-184-3p 3L - 5559545 5559594 3'utr sinu FlyBase G26109.2 AAAGCAATACATACGTCTTTTACCGTCCCATATACAATAATATGTGTAAC 203 5559574 0.64272732 8 190 1495 0.94137931 1.959041392 0.031034483 0.310344828 0.517241379 203 15 2 273 3L:5559545-5559594 6 237 3159 FBgn0010894 232.6666667 13.51333333 20.52333333 1.018624642 17.53823384 11.54783174 2 2 2 0.01 dme-miR-184-3p 7mer-m8 TCCGTCC 3L 5559644 5559650 - 3L_5559644_5559650_- 0.661615243 0.661615243 0.661615243 0 sinu FBtr0077136 5559468 5560751 3L - 5559630 5559683 3'utr sinu FlyBase G34543.2 TTTTAAAGGTAACAATTAGGTCTGTATTAATCATCCGTCCTTTGCACGTATTTG 441 5559643 0.644803719 12 389 4167 0.874766355 0.945969983 0.143925234 0.183673469 0.327102804 441 15 52 468 3L:5559630-5559683 7 sinu FBtr0077136 5559468 5560751 TCCGTCC 7mer-m8 dme-miR-184-3p 3L - 5559631 5559679 3'utr sinu FlyBase G26110.1 AAAGGTAACAATTAGGTCTGTATTAATCATCCGTCCTTTGCACGTATTT 325 5559643 0.697642387 14 275 3109 0.845338983 0.852784869 0.165254237 0.335384615 0.542372881 325 18 55 399 3L:5559631-5559679 7 364.5 3160 FBgn0010894 232.6666667 13.51333333 20.52333333 1.566618911 26.97335964 17.76027286 -7 -7 -7 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3L 5559951 5559956 - 3L_5559951_5559956_- 1 1 1 0 sinu FBtr0077136 5559468 5560751 3L - 5559903 5559966 3'utr sinu FlyBase G34545.1 AAGTCGCAGGCTAGTCGGAACTAGCATCGAAATATTACACTCGTGCCTTAATTAGATAGAACTA 8 5559945 0.930010512 4 7 48 0.9 0.954242509 0 0.125 0.3 8 1 0 9 3L:5559903-5559966 6 sinu FBtr0077136 5559468 5560751 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3L - 5559883 5559966 3'utr sinu FlyBase G26112.1 AAGTCGCAGGCTAGTCGGAACTAGCATCGAAATATTACACTCGTGCCTTAATTAGATAGAACTATTATGGTGTAGTTCGTAGTG 9 5559927 0.985381 7 7 50 0.8 0.903089987 0.4 0.111111111 0.2 9 2 0 8 3L:5559883-5559966 6 2.5 3161 FBgn0010894 232.6666667 13.51333333 20.52333333 0.010744986 0.185002467 0.121812571 -11 -29 -20 0.01 dme-miR-184-3p 7mer-m8 TCCGTCC 3L 5560606 5560612 - 3L_5560606_5560612_- 0.661615243 0.661615243 0.661615243 0 sinu FBtr0077136 5559468 5560751 3L - 5560583 5560641 3'utr sinu FlyBase G34547.2 CAACCAAGAGGAAAACAAAACAAAAACATTCCGTCCCCTCAAAGAATTCTCACCCTAAA 2305 5560613 0.949504949 5 2278 7692 0.991147309 2.492760389 0.002832861 0.18308026 0.333215297 2305 17 8 2799 3L:5560583-5560641 7 sinu FBtr0077136 5559468 5560751 TCCGTCC 7mer-m8 dme-miR-184-3p 3L - 5560562 5560640 3'utr sinu FlyBase G26115.1 AACCAAGAGGAAAACAAAACAAAAACATTCCGTCCCCTCAAAGAATTCTCACCCTAAACATTACAGTCGAACTTCTCTA 1540 5560613 0.945764769 10 1526 5069 0.988743809 2.438542349 0.000900495 0.319480519 0.528140477 1540 18 7 2196 3L:5560562-5560640 7 1910.5 3162 FBgn0010894 232.6666667 13.51333333 20.52333333 8.211318052 141.3788851 93.0891668 1 1 1 0.01 dme-miR-986-5p 7mer-m8 ATTCGAG 3L 5564931 5564937 + 3L_5564931_5564937_+ 0.671796708 0.671796708 0.671796708 0 Sras FBtr0077083 5564827 5565103 3L + 5564918 5564953 3'utr Sras FlyBase G28194.1 AATTGCATATCCCATTCGAGCCAATTCCGCGCACAA 26 5564932 0.737980404 2 26 142 1 1.491361694 0 0.192307692 0.322580645 26 0 0 31 3L:5564918-5564953 7 Sras FBtr0077083 5564827 5565103 ATTCGAG 7mer-m8 dme-miR-986-5p 3L + 5564906 5564955 3'utr Sras FlyBase G21345.1 TGTTTATATGTAAATTGCATATCCCATTCGAGCCAATTCCGCGCACAAAA 21 5564932 0.965155172 4 20 116 1 1.462397998 0 0.285714286 0.482758621 21 0 0 29 3L:5564906-5564955 7 23 3163 FBgn0029121 69.33333333 6.623333333 10.01666667 0.331730769 3.472571716 2.296173045 -1 -1 -1 0.01 dme-miR-2a-2-5p 7mer-m8 TGATGAG 3L 5566092 5566098 + 3L_5566092_5566098_+ 0.658999237 0.658999343 0.65899929 7.07E-08 bc10 FBtr0077084 5565863 5566765 3L + 5565977 5566185 3'utr bc10 FlyBase G28197.1 GCGTTGTTACAGCTTTACATCCTCGAAGATCGGAGAAAGTCAGAGGAGCAGGCGGATATAAGGGATTAGGGATAGCTTGACTAAGTCGGTAAAATCAAGTGATCAGTGATACAAGTGATGAGTGAGTCCGACCAGGAACAAAGATTGTGTGTCTAGTAATACCCATTGCATTATTTCCAGCCCTCTATATGTTACCTTCATAATTCTCT 41 5566121 0.983745117 19 38 282 0.954545455 1.322219295 0.181818182 0.073170732 0.136363636 41 1 1 42 3L:5565977-5566185 7 bc10 FBtr0077084 5565863 5566765 TGATGAG 7mer-m8 dme-miR-2a-2-5p 3L + 5565909 5566210 3'utr bc10 FlyBase G21349.1 AGCCCCCGTAGTCATAGTCAACGAAGATAAAGTGCTAATAATAACTACCTTTTTACGGAATTACGTTCGCGTTGTTACAGCTTTACATCCTCGAAGATCGGAGAAAGTCAGAGGAGCAGGCGGATATAAGGGATTAGGGATAGCTTGACTAAGTCGGTAAAATCAAGTGATCAGTGATACAAGTGATGAGTGAGTCCGACCAGGAACAAAGATTGTGTGTCTAGTAATACCCATTGCATTATTTCCAGCCCTCTATATGTTACCTTCATAATTCTCTTGATTATGAATTGTAATTGTATTGT 56 5566121 0.999929823 27 54 328 0.967032967 1.944482672 0.186813187 0.464285714 0.67032967 56 3 0 88 3L:5565909-5566210 7 8 3164 FBgn0040239 273.54 24.22 36.96666667 0.02924618 0.330305533 0.216411181 -29 -29 -29 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3L 5566128 5566133 + 3L_5566128_5566133_+ 1 0.999999955 0.999999978 0 bc10 FBtr0077084 5565863 5566765 3L + 5565977 5566185 3'utr bc10 FlyBase G28197.1 GCGTTGTTACAGCTTTACATCCTCGAAGATCGGAGAAAGTCAGAGGAGCAGGCGGATATAAGGGATTAGGGATAGCTTGACTAAGTCGGTAAAATCAAGTGATCAGTGATACAAGTGATGAGTGAGTCCGACCAGGAACAAAGATTGTGTGTCTAGTAATACCCATTGCATTATTTCCAGCCCTCTATATGTTACCTTCATAATTCTCT 41 5566121 0.983745117 19 38 282 0.954545455 1.322219295 0.181818182 0.073170732 0.136363636 41 1 1 42 3L:5565977-5566185 6 bc10 FBtr0077084 5565863 5566765 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 5565909 5566210 3'utr bc10 FlyBase G21349.1 AGCCCCCGTAGTCATAGTCAACGAAGATAAAGTGCTAATAATAACTACCTTTTTACGGAATTACGTTCGCGTTGTTACAGCTTTACATCCTCGAAGATCGGAGAAAGTCAGAGGAGCAGGCGGATATAAGGGATTAGGGATAGCTTGACTAAGTCGGTAAAATCAAGTGATCAGTGATACAAGTGATGAGTGAGTCCGACCAGGAACAAAGATTGTGTGTCTAGTAATACCCATTGCATTATTTCCAGCCCTCTATATGTTACCTTCATAATTCTCTTGATTATGAATTGTAATTGTATTGT 56 5566121 0.999929823 27 54 328 0.967032967 1.944482672 0.186813187 0.464285714 0.67032967 56 3 0 88 3L:5565909-5566210 6 10 3165 FBgn0040239 273.54 24.22 36.96666667 0.036557725 0.412881916 0.270513977 7 7 7 0.01 dme-miR-33-5p 8mer-A1 CAATGCAA 3L 5566343 5566350 + 3L_5566343_5566350_+ 0.634552243 0.634552243 0.634552243 0 bc10 FBtr0077084 5565863 5566765 3L + 5566223 5566377 3'utr bc10 FlyBase G28198.1 TAAAGCTTAGACGAATTTAGTTTATACGAAGAAAGCGCTACGAAAACGTATTGTACATCACCCCACCCAAAAGCCCTACCCTTCAAATCAAAAGAAAAAACCCCTATCCAACCCACTTGTCAATGCAACTTACGATTAGTCATATATGTTATATA 135 5566342 0.974351947 20 126 770 0.949685535 1.701855693 0.050314465 0.148148148 0.27672956 135 6 2 151 3L:5566223-5566377 8 bc10 FBtr0077084 5565863 5566765 CAATGCAA 8mer-A1 dme-miR-33-5p 3L + 5566318 5566388 3'utr bc10 FlyBase G21351.1 AAAAACCCCTATCCAACCCACTTGTCAATGCAACTTACGATTAGTCATATATGTTATATATAGATAAATAC 42 5566342 0.979956428 8 37 263 0.921875 1.770852012 0.046875 0.404761905 0.609375 42 5 0 59 3L:5566318-5566388 8 62.5 3166 FBgn0040239 273.54 24.22 36.96666667 0.228485779 2.580511974 1.690712353 1 1 1 0.01 dme-miR-277-3p 8mer-A1 TGCATTTA 3L 5590070 5590077 + 3L_5590070_5590077_+ 0.625364269 0.625364269 0.625364269 0 l(3)psg2 FBtr0077085 5589915 5590390 3L + 5590048 5590128 3'utr l(3)psg2 FlyBase G28229.1 AATTGACCATTTGTAAACAAGTTGCATTTATTCATAGAAGGTCGTTTTCGATTTATTCAGCTTTAGGTTTCTATGTCATTT 31 5590069 0.892120342 5 31 292 1 1.591064607 0.102564103 0.225806452 0.384615385 31 0 0 39 3L:5590048-5590128 8 l(3)psg2 FBtr0077085 5589915 5590390 TGCATTTA 8mer-A1 dme-miR-277-3p 3L + 5590057 5590089 3'utr l(3)psg2 FlyBase G21376.1 TTTGTAAACAAGTTGCATTTATTCATAGAAGGT 14 5590069 0.893072524 2 11 100 0.85 1.230448921 0.1 0.285714286 0.5 14 3 0 17 3L:5590057-5590089 8 17 3167 FBgn0035617 542.34 10 15.43333333 0.03134565 1.7 1.101511879 1 1 1 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 5601193 5601198 - 3L_5601193_5601198_- 1 1 1 0 CG10590 FBtr0077127 5601094 5601788 3L - 5601113 5601219 3'utr CG10590 FlyBase G34576.1 AATCTATGCAACTGCAACAAAATGTGACTTGAACTTGTTTGCGCCAATTAAGTTATGTACGATGCAAGAAATGTGCTGATTAGCAATAGTCGATAATCTAATAATAA 51 5601196 0.748760014 15 49 303 0.96969697 1.806179974 0.196969697 0.254901961 0.424242424 51 2 0 64 3L:5601113-5601219 6 CG10590 FBtr0077127 5601094 5601788 ATGTGA 6mer3-8 dme-miR-1003-3p 3L - 5601110 5601220 3'utr CG10590 FlyBase G26140.1 CAATCTATGCAACTGCAACAAAATGTGACTTGAACTTGTTTGCGCCAATTAAGTTATGTACGATGCAAGAAATGTGCTGATTAGCAATAGTCGATAATCTAATAATAAATT 39 5601191 0.979165506 14 36 252 0.948275862 1.740362689 0.206896552 0.384615385 0.586206897 39 3 0 55 3L:5601110-5601220 6 27 3168 FBgn0035622 320.01 14.52333333 22.10333333 0.084372363 1.859077347 1.221535213 -2 -7 -4.5 0.01 dme-miR-277-3p 8mer-A1 TGCATTTA 3L 5601454 5601461 - 3L_5601454_5601461_- 0.625364269 0.625364269 0.625364269 0 CG10590 FBtr0077127 5601094 5601788 3L - 5601430 5601498 3'utr CG10590 FlyBase G34577.1 ATTTGGGAAAACATTGTGAATTAAAAGCTCTTTCTGTTGCATTTACGTTTTGCTAGTTTTAAGAGTCAA 13 5601462 0.99246232 7 12 133 0.933333333 1.146128036 0.2 0.153846154 0.266666667 13 1 0 14 3L:5601430-5601498 8 CG10590 FBtr0077127 5601094 5601788 TGCATTTA 8mer-A1 dme-miR-277-3p 3L - 5601431 5601499 3'utr CG10590 FlyBase G26141.1 AATTTGGGAAAACATTGTGAATTAAAAGCTCTTTCTGTTGCATTTACGTTTTGCTAGTTTTAAGAGTCA 14 5601485 0.985715514 5 13 113 0.947368421 1.255272505 0.473684211 0.214285714 0.421052632 14 1 0 18 3L:5601431-5601499 8 7.5 3169 FBgn0035622 320.01 14.52333333 22.10333333 0.023436768 0.516410374 0.339315337 1 24 12.5 0.01 dme-miR-184-5p 6mer3-8 TGATAA 3L 5607250 5607255 - 3L_5607250_5607255_- 1 1 1 0 Eaf6 FBtr0077126 5607160 5607280 3L - 5607225 5607256 3'utr Eaf6 FlyBase G34589.1 CTGATAAAGCACTATTTACCTTCAAAGTTTTT 23 5607241 0.693613739 3 23 169 1 1.477121255 0.2 0.217391304 0.4 23 0 0 30 3L:5607225-5607256 6 Eaf6 FBtr0077126 5607160 5607280 TGATAA 6mer3-8 dme-miR-184-5p 3L - 5607202 5607257 3'utr Eaf6 FlyBase G26147.1 TCTGATAAAGCACTATTTACCTTCAAAGTTTTTAAATTAAAATTTGTACATGAAAT 25 5607241 0.981929553 3 25 187 1 1.633468456 0.139534884 0.52 0.720930233 25 0 0 43 3L:5607202-5607257 6 19 3170 FBgn0035624 253.13 37.55333333 58.04333333 0.075060246 0.505947097 0.327341641 -14 -14 -14 0.01 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3L 5659773 5659779 - 3L_5659773_5659779_- 0.620204031 0.620204031 0.620204031 0 Sse FBtr0077125 5659698 5659878 3L - 5659753 5659832 3'utr Sse FlyBase G34593.1 GGAACTGTGTACAATAATTTAATTTAATTGAACTACTTCATTCAAGTGGAAAGTGGTGCTCAAAGTTTGCATTAAACGCT 63 5659779 0.971379222 9 60 344 0.961038961 1.86923172 0.181818182 0.158730159 0.311688312 63 3 0 74 3L:5659753-5659832 7 Sse FBtr0077125 5659698 5659878 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3L - 5659734 5659803 3'utr Sse FlyBase G26150.1 GAACTACTTCATTCAAGTGGAAAGTGGTGCTCAAAGTTTGCATTAAACGCTAAATGTAACACTCAGAATA 33 5659779 0.963026559 4 33 168 1 1.681241237 0.208333333 0.333333333 0.541666667 33 0 0 48 3L:5659734-5659803 7 44.5 3171 FBgn0035627 140.3333333 7.786666667 11.84333333 0.317102138 5.71489726 3.757388123 0 0 0 0.01 dme-miR-13b-2-5p 6mer2-7 TTGACG 3L 574216 574221 + 3L_574216_574221_+ 1 0.999999999 0.999999999 0 hipk FBtr0072552|FBtr0331786|FBtr0072551 574200|574200|574200 581099|576047|576047 3L + 574189 574240 stop_codon hipk FlyBase G26816.2 TGGGGCTGAGTAGACCGACGATGGGAGTTGACGGGGAGAGGGGCGATGAGGA 12 574217 0.813383664 5 10 27 0.923076923 1.079181246 0.538461538 0.083333333 0.153846154 12 1 0 12 3L:574189-574240 6 hipk FBtr0072552|FBtr0331786|FBtr0072551 574200|574200|574200 581099|576047|576047 TTGACG 6mer2-7 dme-miR-13b-2-5p 3L + 574155 574239 stop_codon hipk FlyBase G20277.1 ACGCGGCGCACTTTGCGCCCACCAACATATGGTATGGGGCTGAGTAGACCGACGATGGGAGTTGACGGGGAGAGGGGCGATGAGG 13 574211 0.951330709 8 11 46 0.818181818 1.255272505 0.545454545 0.538461538 0.727272727 13 4 0 18 3L:574155-574239 6 7.5 3172 FBgn0035142 10724.84 157.7366667 241.6366667 0.000699311 0.0475476 0.031038336 -1 5 2 0.01 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 574535 574541 + 3L_574535_574541_+ 0.823349562 0.823349561 0.823349562 0 hipk FBtr0072552|FBtr0331786|FBtr0072551 574200|574200|574200 581099|576047|576047 3L + 574497 574591 3'utr hipk FlyBase G26818.1 AATCCGGAGCAAAGCCAAGAGCTGCAGCAACATCAGCTGCAGCTAACTCAGTGCTGGTGGTTCATGCTACTCATGCAGCAGACTATAATCCAGAA 15 574549 0.956151238 8 15 65 1 1.255272505 0.166666667 0.2 0.333333333 15 0 0 18 3L:574497-574591 7 hipk FBtr0072552|FBtr0331786|FBtr0072551 574200|574200|574200 581099|576047|576047 GCAGCTA 7mer-A1 dme-miR-980-3p 3L + 574514 574587 3'utr hipk FlyBase G20278.1 AGAGCTGCAGCAACATCAGCTGCAGCTAACTCAGTGCTGGTGGTTCATGCTACTCATGCAGCAGACTATAATCC 12 574548 0.957619732 5 10 51 0.761904762 1.204119983 0.19047619 0.5 0.714285714 12 5 0 16 3L:574514-574587 7 4 3173 FBgn0035142 10724.84 157.7366667 241.6366667 0.000372966 0.02535872 0.016553779 -14 -13 -13.5 0.01 dme-bantam-3p 7mer-A1 GATCTCA 3L 574752 574758 + 3L_574752_574758_+ 0.823349562 0.823349561 0.823349562 0 hipk FBtr0072552|FBtr0331786|FBtr0072551 574200|574200|574200 581099|576047|576047 3L + 574730 574773 3'utr hipk FlyBase G26819.1 ATTTTTTTTCGGGGTCCCGCGGGATCTCATTTCTGCTACTATTA 24 574759 0.631444071 8 22 206 0.9375 1.477121255 0.15625 0.291666667 0.46875 24 2 0 30 3L:574730-574773 7 hipk FBtr0072552|FBtr0331786|FBtr0072551 574200|574200|574200 581099|576047|576047 GATCTCA 7mer-A1 dme-bantam-3p 3L + 574729 574772 3'utr hipk FlyBase G20279.1 TATTTTTTTTCGGGGTCCCGCGGGATCTCATTTCTGCTACTATT 18 574760 0.729626507 7 16 125 0.966666667 1.462397998 0.033333333 0.388888889 0.633333333 18 1 0 29 3L:574729-574772 7 20 3174 FBgn0035142 10724.84 157.7366667 241.6366667 0.00186483 0.126793601 0.082768895 -7 -8 -7.5 0.01 dme-miR-307a-3p 6mer2-7 GTTGTG 3L 574867 574872 + 3L_574867_574872_+ 1 0.999999998 0.999999999 0 hipk FBtr0072552|FBtr0331786|FBtr0072551 574200|574200|574200 581099|576047|576047 3L + 574815 574958 3'utr hipk FlyBase G26820.1 AAGCACTCCTACACGCAGCTGGGTGTACAGTGCTCAGGCAAACTTTTGGCAAGTTGTGCATCAGCACAATTTCGCACCCACACACACTACAGCTATAGCTTCTATACCCTCGAAATATGCCAGTTAGATGCATATCGAGAGATG 33 574859 0.820714173 19 31 184 1 1.62324929 0.333333333 0.272727273 0.428571429 33 0 0 42 3L:574815-574958 6 hipk FBtr0072552|FBtr0331786|FBtr0072551 574200|574200|574200 581099|576047|576047 GTTGTG 6mer2-7 dme-miR-307a-3p 3L + 574811 574885 3'utr hipk FlyBase G20280.1 TGTAAAGCACTCCTACACGCAGCTGGGTGTACAGTGCTCAGGCAAACTTTTGGCAAGTTGTGCATCAGCACAATT 10 574859 0.986064835 5 8 69 0.75 0.954242509 0.166666667 0.2 0.333333333 10 3 0 9 3L:574811-574885 6 10 3175 FBgn0035142 10724.84 157.7366667 241.6366667 0.000932415 0.063396801 0.041384448 8 8 8 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 3L 5750322 5750328 - 3L_5750322_5750328_- 0.823349562 0.823349562 0.823349562 0 DnaJ-1 FBtr0077124|FBtr0077123 5750027|5750027 5750588|5750588 3L - 5750070 5750551 3'utr DnaJ-1 FlyBase G34598.1 CGCATATAATTGTTATCACTTTAGTTAAGGCCTATATTTAATTTACCGTACGTACTCGTAAGACAACTTAGCCTAACCAATTGTAGCCCTAAGCTAGTGAGTGTGCCAAGCGAAGAGCTGTAGATATTGGCCGAGGATGCAAGCGCTGGATAGGATTAGGAAAGAGAACAACACACACACACACACACACATAAAGCAGCCCGTGTAGCCCGTTTCGTGTTGGAGACTGATCGATTATTAGCTATTTAGCATTACACAAATTCCATAAGTTGTTTTGTTTACCGCCACATGAATCGGTGCCTCAACATCTTATACATAATAATCCCAAAACAAAATATTAAATAAATGAGGTATTATAAATTTAAAGTAACTAACCATTTTTCAAGCAAAGCACATTTTCGGCATTCCAACACGGGGAGGTTACATCAGTTAGTAGAACACTTATAGATTTATACGCCGTAAGGACATAGTACGTTTTAGTA 679 5750336 0.971579659 70 613 3762 0.910539216 1.829596129 0.234068627 0.176730486 0.31495098 679 63 10 743 3L:5750070-5750551 7 DnaJ-1 FBtr0077124|FBtr0077123 5750027|5750027 5750588|5750588 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 5750185 5750496 3'utr DnaJ-1 FlyBase G26155.1 TCGTAAGACAACTTAGCCTAACCAATTGTAGCCCTAAGCTAGTGAGTGTGCCAAGCGAAGAGCTGTAGATATTGGCCGAGGATGCAAGCGCTGGATAGGATTAGGAAAGAGAACAACACACACACACACACACACATAAAGCAGCCCGTGTAGCCCGTTTCGTGTTGGAGACTGATCGATTATTAGCTATTTAGCATTACACAAATTCCATAAGTTGTTTTGTTTACCGCCACATGAATCGGTGCCTCAACATCTTATACATAATAATCCCAAAACAAAATATTAAATAAATGAGGTATTATAAATTTAAAG 410 5750337 0.975410799 48 353 2257 0.861685215 2.256878032 0.255961844 0.395121951 0.60572337 410 85 2 542 3L:5750185-5750496 7 179.5 3176 FBgn0263106 2505.54 158.3466667 242.02 0.071641243 1.13358875 0.741674242 8 9 8.5 0.01 dme-miR-283-5p 6mer2-7 GATATT 3L 5750424 5750429 - 3L_5750424_5750429_- 1 1 1 0 DnaJ-1 FBtr0077124|FBtr0077123 5750027|5750027 5750588|5750588 3L - 5750070 5750551 3'utr DnaJ-1 FlyBase G34598.1 CGCATATAATTGTTATCACTTTAGTTAAGGCCTATATTTAATTTACCGTACGTACTCGTAAGACAACTTAGCCTAACCAATTGTAGCCCTAAGCTAGTGAGTGTGCCAAGCGAAGAGCTGTAGATATTGGCCGAGGATGCAAGCGCTGGATAGGATTAGGAAAGAGAACAACACACACACACACACACACATAAAGCAGCCCGTGTAGCCCGTTTCGTGTTGGAGACTGATCGATTATTAGCTATTTAGCATTACACAAATTCCATAAGTTGTTTTGTTTACCGCCACATGAATCGGTGCCTCAACATCTTATACATAATAATCCCAAAACAAAATATTAAATAAATGAGGTATTATAAATTTAAAGTAACTAACCATTTTTCAAGCAAAGCACATTTTCGGCATTCCAACACGGGGAGGTTACATCAGTTAGTAGAACACTTATAGATTTATACGCCGTAAGGACATAGTACGTTTTAGTA 679 5750425 0.971579659 70 613 3762 0.910539216 1.829596129 0.234068627 0.176730486 0.31495098 679 63 10 743 3L:5750070-5750551 6 DnaJ-1 FBtr0077124|FBtr0077123 5750027|5750027 5750588|5750588 GATATT 6mer2-7 dme-miR-283-5p 3L - 5750185 5750496 3'utr DnaJ-1 FlyBase G26155.1 TCGTAAGACAACTTAGCCTAACCAATTGTAGCCCTAAGCTAGTGAGTGTGCCAAGCGAAGAGCTGTAGATATTGGCCGAGGATGCAAGCGCTGGATAGGATTAGGAAAGAGAACAACACACACACACACACACACATAAAGCAGCCCGTGTAGCCCGTTTCGTGTTGGAGACTGATCGATTATTAGCTATTTAGCATTACACAAATTCCATAAGTTGTTTTGTTTACCGCCACATGAATCGGTGCCTCAACATCTTATACATAATAATCCCAAAACAAAATATTAAATAAATGAGGTATTATAAATTTAAAG 410 5750414 0.975410799 48 353 2257 0.861685215 2.256878032 0.255961844 0.395121951 0.60572337 410 85 2 542 3L:5750185-5750496 6 99 3177 FBgn0263106 2505.54 158.3466667 242.02 0.03951244 0.625210509 0.409057103 -4 -15 -9.5 0.01 dme-miR-2b-2-5p 7mer-m8 TTGAAGA 3L 575319 575325 + 3L_575319_575325_+ 0.631525999 0.631525988 0.631525994 0 hipk FBtr0072552|FBtr0331786|FBtr0072551 574200|574200|574200 581099|576047|576047 3L + 575286 575491 3'utr hipk FlyBase G26823.1 AAGCAACAAAAGAAATTGAGATGACGAAAGACGTTGAAGATTATGATTATGATGCAGGAGTAGAGTTAGACGAGGTTAGTAGAGAACCACAACAAATTGAATACCGCAAAAACCTTACTAGCAAACAAACAAACAAATAAAATAGATACCCTAGGAGATATCAACAAAGAGAACTTAACAATTACATAGCTCATAGATTTAGTGGA 130 575333 0.966140553 34 111 665 0.859060403 1.408239965 0.234899329 0.130769231 0.241610738 130 17 4 128 3L:575286-575491 7 hipk FBtr0072552|FBtr0331786|FBtr0072551 574200|574200|574200 581099|576047|576047 TTGAAGA 7mer-m8 dme-miR-2b-2-5p 3L + 575282 575418 3'utr hipk FlyBase G20285.1 AAACAAGCAACAAAAGAAATTGAGATGACGAAAGACGTTGAAGATTATGATTATGATGCAGGAGTAGAGTTAGACGAGGTTAGTAGAGAACCACAACAAATTGAATACCGCAAAAACCTTACTAGCAAACAAACAAA 49 575302 0.960826302 14 46 233 0.901408451 1.505149978 0.492957746 0.306122449 0.521126761 49 6 1 64 3L:575282-575418 7 27 3178 FBgn0035142 10724.84 157.7366667 241.6366667 0.00251752 0.171171362 0.111738009 -14 17 1.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 5761437 5761442 + 3L_5761437_5761442_+ 1 1 1 0 Ubp64E FBtr0077095|FBtr0306259 5761383|5761383 5761886|5761886 3L + 5761433 5761468 3'utr Ubp64E FlyBase G28259.1 GTACACCAAACCATGTATGTAAGCGACGGCAGACCA 6 5761447 0.971992641 2 3 21 0.714285714 0.698970004 0.285714286 0.166666667 0.285714286 6 2 0 5 3L:5761433-5761468 6 Ubp64E FBtr0077095|FBtr0306259 5761383|5761383 5761886|5761886 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 5761428 5761464 3'utr Ubp64E FlyBase G21403.1 AAAAAGTACACCAAACCATGTATGTAAGCGACGGCAG 6 5761447 0.904297503 3 6 17 1 0.903089987 0.375 0.333333333 0.5 6 0 0 8 3L:5761428-5761464 6 5.5 3179 FBgn0016756 596.6966667 13.13 20.13333333 0.009217414 0.418888043 0.273178808 -10 -10 -10 0.01 dme-miR-14-3p 6mer2-7 AGACTG 3L 5761770 5761775 + 3L_5761770_5761775_+ 0.971032505 0.933301031 0.952166768 0.0266802 Ubp64E FBtr0077095|FBtr0306259 5761383|5761383 5761886|5761886 3L + 5761682 5761847 3'utr Ubp64E FlyBase G28261.1 TGGGGTGGCCAAGTGAGCACAGCACTAAGTGACGTTTAACATAACGAAGTTATTCTTGCAACTTTCGTAATACAAGAGTTCAAAGATGAGACTGTAAAATTTAAAATAACAAAAGGCAAGAAATCTAAATTACAAATTGTATAATGTGAATGTGAACATCAAAACT 1197 5761768 0.972437919 19 1180 7016 0.985294118 3.127104798 0.0125 0.11946533 0.225 1197 20 0 1340 3L:5761682-5761847 6 Ubp64E FBtr0077095|FBtr0306259 5761383|5761383 5761886|5761886 AGACTG 6mer2-7 dme-miR-14-3p 3L + 5761746 5761848 3'utr Ubp64E FlyBase G21405.1 TCGTAATACAAGAGTTCAAAGATGAGACTGTAAAATTTAAAATAACAAAAGGCAAGAAATCTAAATTACAAATTGTATAATGTGAATGTGAACATCAAAACTA 760 5761768 0.947975984 15 751 4368 0.989954338 2.733999287 0.00456621 0.328947368 0.534246575 760 10 1 1084 3L:5761746-5761848 6 942 3180 FBgn0016756 596.6966667 13.13 20.13333333 1.578691574 71.74409749 46.78807947 2 2 2 0.01 dme-miR-11-3p 7mer-m1 TGTGATG 3L 576386 576392 + 3L_576386_576392_+ 0.612071121 0.61207112 0.61207112 0 hipk FBtr0072552 574200 581099 3L + 576102 576567 3'utr hipk FlyBase G26826.1 TCGTAGTTAGAATTAAACTTAACTTTCGCGATAAAATAACCAAGCAGCAACTAATTTTTCGCCCTCCTGGGGTCGATTACTCGGTTGTCCCAACCGAGAATTTATTAAAATCGGTCCTTCGAGGGAGGCACTTCCTATATAATGAATTACATGCTGATACAAAGCAGAAATATTTAAACCATCCTTCGCCCCTTCCTAGATCAGCTGTGTACAGTAGGCTATTTTGGGATCGGGATCGAGATGAATCAACTCCGACGATTGGAAAAGATCTAGCATATAATTATTGTGATGTAGTTTTTAACGAGGAGCAGAGAAGTCCGCAAACGTTTTTTGTCAGTCGTCGTCGTCGTCGTCGGCGAATAGAAATTACCTAAAATTACGAATAACCAATTGCGATACGGATACGGAATATGCATCTATATGTTAACTAATTAGTGTGCAGGATTCAATAGCGTTAGCACGACAA 2062 576384 0.895443614 90 1833 20753 0.89198172 1.553680794 0.374740341 0.143549952 0.266306606 2062 201 59 2147 3L:576102-576567 7 hipk FBtr0072552 574200 581099 TGTGATG 7mer-m1 dme-miR-11-3p 3L + 576212 576418 3'utr hipk FlyBase G20292.1 TCGGTCCTTCGAGGGAGGCACTTCCTATATAATGAATTACATGCTGATACAAAGCAGAAATATTTAAACCATCCTTCGCCCCTTCCTAGATCAGCTGTGTACAGTAGGCTATTTTGGGATCGGGATCGAGATGAATCAACTCCGACGATTGGAAAAGATCTAGCATATAATTATTGTGATGTAGTTTTTAACGAGGAGCAGAGAAGT 1293 576384 0.863780343 34 1041 14107 0.799591002 1.28575173 0.440695297 0.373549884 0.585889571 1293 312 80 1564 3L:576212-576418 7 1390 3181 FBgn0035142 10724.84 157.7366667 241.6366667 0.129605663 8.81215528 5.752438234 2 2 2 0.01 dme-miR-970-3p 7mer-A1 CTTATGA 3L 577254 577260 + 3L_577254_577260_+ 0.823349562 0.823349561 0.823349562 0 hipk FBtr0072552 574200 581099 3L + 577196 577276 3'utr hipk FlyBase G26827.4 AAAACAAGAAAACAAATCATGAACGCTTTAAATGTAACAAAAACGAAACGTTAATAGACTTATGAAAACAACAAACAAATT 569 577250 0.958469704 11 552 2852 0.973611111 2.368596763 0.118055556 0.20913884 0.375 569 17 2 701 3L:577196-577276 7 hipk FBtr0072552 574200 581099 CTTATGA 7mer-A1 dme-miR-970-3p 3L + 577196 577277 3'utr hipk FlyBase G20296.1 AAAACAAGAAAACAAATCATGAACGCTTTAAATGTAACAAAAACGAAACGTTAATAGACTTATGAAAACAACAAACAAATTA 414 577250 0.954887489 10 405 2070 0.979166667 2.183981219 0.088141026 0.376811594 0.586538462 414 10 3 611 3L:577196-577277 7 460.5 3182 FBgn0035142 10724.84 157.7366667 241.6366667 0.042937703 2.919422666 1.905753818 4 4 4 0.01 dme-miR-8-3p 6mer2-7 AGTATT 3L 577575 577580 + 3L_577575_577580_+ 1 0.999999999 0.999999999 0 hipk FBtr0072552 574200 581099 3L + 577361 577612 3'utr hipk FlyBase G26828.1 TTAAAGTTATATTAAACAAACTCACACTCAACAAATAAATAAGCAGGCAGGTGGACCACGGTCGTTAGCAGACTTTTGTGGCCCACTGTCGGAGGACTTGTATTTAGGAGGAACTCTGGGTGGCTTTCACCACCAGCGAAATGCGGAGAGATCCGCACAAACACTCTAATATACGTATATATTTAAATGAGAAATGTTTTAACTGTGTAGCCTTAGTATTTGTACTCGTCGTCCTCTCGATTTCCGACAAAA 358 577557 0.999951535 45 336 3222 0.934146341 1.88422877 0.146341463 0.125698324 0.236585366 358 23 4 383 3L:577361-577612 6 hipk FBtr0072552 574200 581099 AGTATT 6mer2-7 dme-miR-8-3p 3L + 577533 577639 3'utr hipk FlyBase G20298.1 ACGTATATATTTAAATGAGAAATGTTTTAACTGTGTAGCCTTAGTATTTGTACTCGTCGTCCTCTCGATTTCCGACAAAAATATGATGATATACGATACTGTAGGGC 170 577566 0.802425325 21 146 1635 0.873469388 1.631443769 0.093877551 0.317647059 0.526530612 170 27 4 214 3L:577533-577639 6 139 3183 FBgn0035142 10724.84 157.7366667 241.6366667 0.012960566 0.881215528 0.575243823 18 9 13.5 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA 3L 5776262 5776267 + 3L_5776262_5776267_+ 1 1 1 0 scny FBtr0077100|FBtr0077103|FBtr0330128 5775571|5775571|5774610 5776271|5776271|5776271 3L + 5776219 5776266 3'utr scny FlyBase G28288.1 ATAACCCAAAAAAAATAAAGTATGTTGGATGTAATATGTACCATGATG 6 5776255 0.98003982 3 6 42 1 0.903089987 0.5 0.333333333 0.5 6 0 0 8 3L:5776219-5776266 5 scny FBtr0077100|FBtr0077103|FBtr0330128 5775571|5775571|5774610 5776271|5776271|5776271 TGATGA 6mer3-8 dme-miR-2a-2-5p 3L + 5776172 5776267 3'utr scny FlyBase G21425.1 TATAGAGCATAACCGAACGGCGGCGAGCAGCGATATTGCCAATGTTAATAACCCAAAAAAAATAAAGTATGTTGGATGTAATATGTACCATGATGA 11 5776255 0.968747995 6 11 54 1 1.230448921 0.823529412 0.363636364 0.588235294 11 0 0 17 3L:5776172-5776267 6 4.5 3184 FBgn0260936 2114.12 58.80666667 90.26666667 0.002128545 0.076521936 0.04985229 7 7 7 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 5777529 5777535 - 3L_5777529_5777535_- 0.754178774 0.754178804 0.754178789 0 Myt1 FBtr0077118|FBtr0077118|FBtr0077118 5777474|5777474|5777474 5777763|5777763|5777763 3L - 5777515 5777584 3'utr Myt1 FlyBase G34629.1 AATGTTAATGCTTCTTTAGAAGAACTTGTTGAACTTGAACATATAATCATGTGATATATATACGAAAAGC 28 5777539 0.853584963 9 23 197 0.921052632 1.243038049 0.184210526 0.25 0.447368421 28 2 1 35 3L:5777515-5777584 7 Myt1 FBtr0077118|FBtr0077118|FBtr0077118 5777474|5777474|5777474 5777763|5777763|5777763 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 5777498 5777555 3'utr Myt1 FlyBase G26181.1 TGAACTTGAACATATAATCATGTGATATATATACGAAAAGCGATTTGAAAAGTTTAAA 21 5777538 0.970630995 7 17 157 0.814814815 1.041392685 0.074074074 0.238095238 0.407407407 21 4 1 22 3L:5777498-5777555 7 19 3185 FBgn0040298 171.3866667 10.89333333 16.77 0.110860433 1.744186047 1.132975552 4 3 3.5 0.01 dme-miR-2b-2-5p 6mer3-8 TTGAAG 3L 5789991 5789996 - 3L_5789991_5789996_- 1 1 1 0 Bre1 FBtr0344538 5789829 5790544 3L - 5789977 5790016 3'utr Bre1 FlyBase G34637.1 TTTAAAAGTCGCGCTTTGCTTTGAAGGGCTGCTAACTTGG 14 5790000 0.686575056 5 14 105 1 1.204119983 0.3125 0.142857143 0.25 14 0 0 16 3L:5789977-5790016 6 Bre1 FBtr0344538 5789829 5790544 TTGAAG 6mer3-8 dme-miR-2b-2-5p 3L - 5789961 5790021 3'utr Bre1 FlyBase G26187.1 ATCCGTTTAAAAGTCGCGCTTTGCTTTGAAGGGCTGCTAACTTGGTTATAATTGATAAGTA 10 5789997 0.986866783 4 8 77 0.857142857 1.079181246 0.071428571 0.4 0.571428571 10 2 0 12 3L:5789961-5790021 6 11 3186 FBgn0086694 838.4133333 27.30333333 41.84333333 0.01312002 0.402881211 0.262885366 4 1 2.5 0.01 dme-miR-932-5p 6mer2-7 GAATTG 3L 5799004 5799009 - 3L_5799004_5799009_- 1 1 1 0 S6k FBtr0077114|FBtr0333264 5798946|5797547 5800429|5800429 3L - 5798976 5799039 3'utr S6k FlyBase G34651.1 AAGATGTCAAATATAATCAAAAGGTGCTTTGAATTGTTTAAAAAGACAAGACAACTACAGATTA 144 5799011 0.716662542 11 139 1020 0.969512195 1.900367129 0.018292683 0.125 0.231707317 144 4 1 159 3L:5798976-5799039 6 S6k FBtr0077114|FBtr0333264 5798946|5797547 5800429|5800429 GAATTG 6mer2-7 dme-miR-932-5p 3L - 5798997 5799039 3'utr S6k FlyBase G26200.1 AAGATGTCAAATATAATCAAAAGGTGCTTTGAATTGTTTAAAA 82 5799011 0.721595786 5 78 582 0.962616822 2.012837225 0 0.219512195 0.401869159 82 4 0 103 3L:5798997-5799039 6 110.5 3187 FBgn0015806 3238.726667 104.32 160.0233333 0.034118347 1.059240798 0.690524299 2 2 2 0.01 dme-miR-999-3p 7mer-A1 GTTAACA 3L 5799832 5799838 - 3L_5799832_5799838_- 0.823349562 0.823349562 0.823349562 0 S6k FBtr0077114|FBtr0333264 5798946|5797547 5800429|5800429 3L - 5799805 5799901 3'utr S6k FlyBase G34653.1 AAAACCTATCCGTGTTTATGTATAAAGATTATACTTACACTTATGTTTTATATAGGCAAAAAGGTTAACACAACTTAGTTCAAATGTACACGCAGCA 22 5799827 0.86176034 6 22 178 1 1.414973348 0.076923077 0.181818182 0.307692308 22 0 0 26 3L:5799805-5799901 7 S6k FBtr0077114|FBtr0333264 5798946|5797547 5800429|5800429 GTTAACA 7mer-A1 dme-miR-999-3p 3L - 5799806 5799841 3'utr S6k FlyBase G26202.1 AAGGTTAACACAACTTAGTTCAAATGTACACGCAGC 11 5799827 0.836161878 3 9 62 0.722222222 0.636822098 0.166666667 0.545454545 0.722222222 11 3 2 13 3L:5799806-5799841 7 9.5 3188 FBgn0015806 3238.726667 104.32 160.0233333 0.002933252 0.091065951 0.059366342 -11 -11 -11 0.01 dme-miR-79-3p 7mer-m8 TAGCTTT 3L 5812133 5812139 + 3L_5812133_5812139_+ 0.620204031 0.620204031 0.620204031 0 CG5537 FBtr0310534 5811928 5812228 3L + 5812008 5812208 intron-3'utr CG5537 FlyBase G28303.1 CCTGCGTTGCGCTCCACTAACAAATGCTACCCTCTCTCACTCTGTTTCGTCCTCCAGATTGCATTTGAGACACACAGACAAATAGACGACCCCTGCGGCCAACCAAACTACTACTTAGCAACTGTTAGCTTTTCACAACTGGCTTTTAATGCAACTCTCAAATACGTTACGTTCGTTACGCACTATTGTAAATATAGAAAC 178 5812132 0.991458247 29 170 1114 0.952606635 2.303196057 0.09478673 0.151685393 0.28436019 178 10 0 201 3L:5812008-5812208 7 CG5537 FBtr0310534 5811928 5812228 TAGCTTT 7mer-m8 dme-miR-79-3p 3L + 5812042 5812172 intron-3'utr CG5537 FlyBase G21437.1 TCTCACTCTGTTTCGTCCTCCAGATTGCATTTGAGACACACAGACAAATAGACGACCCCTGCGGCCAACCAAACTACTACTTAGCAACTGTTAGCTTTTCACAACTGGCTTTTAATGCAACTCTCAAATAC 100 5812157 0.990433733 16 93 650 0.956521739 2.187520721 0.093167702 0.41 0.633540373 100 7 0 154 3L:5812042-5812172 7 38.5 3189 FBgn0035639 210.32 23.03 35.33333333 0.183054393 1.671732523 1.089622642 1 -24 -11.5 0.01 dme-miR-33-5p 7mer-A1 AATGCAA 3L 5812155 5812161 + 3L_5812155_5812161_+ 0.782911824 0.782911823 0.782911823 0 CG5537 FBtr0310534 5811928 5812228 3L + 5812008 5812208 intron-3'utr CG5537 FlyBase G28303.1 CCTGCGTTGCGCTCCACTAACAAATGCTACCCTCTCTCACTCTGTTTCGTCCTCCAGATTGCATTTGAGACACACAGACAAATAGACGACCCCTGCGGCCAACCAAACTACTACTTAGCAACTGTTAGCTTTTCACAACTGGCTTTTAATGCAACTCTCAAATACGTTACGTTCGTTACGCACTATTGTAAATATAGAAAC 178 5812132 0.991458247 29 170 1114 0.952606635 2.303196057 0.09478673 0.151685393 0.28436019 178 10 0 201 3L:5812008-5812208 7 CG5537 FBtr0310534 5811928 5812228 AATGCAA 7mer-A1 dme-miR-33-5p 3L + 5812042 5812172 intron-3'utr CG5537 FlyBase G21437.1 TCTCACTCTGTTTCGTCCTCCAGATTGCATTTGAGACACACAGACAAATAGACGACCCCTGCGGCCAACCAAACTACTACTTAGCAACTGTTAGCTTTTCACAACTGGCTTTTAATGCAACTCTCAAATAC 100 5812157 0.990433733 16 93 650 0.956521739 2.187520721 0.093167702 0.41 0.633540373 100 7 0 154 3L:5812042-5812172 7 37 3190 FBgn0035639 210.32 23.03 35.33333333 0.175922404 1.606600087 1.047169811 23 -2 10.5 0.01 dme-miR-1006-3p 6mer3-8 CGAATT 3L 582862 582867 - 3L_582862_582867_- 1 1 1 0 Kah FBtr0072563 582822 583983 3L - 582823 582892 3'utr Kah FlyBase G33051.1 TGTACTATAGATTTGCACATTAACTCGAATTAAACAAGAGATCCGATCCATTGATCCCCGAGAAAATACA 30 582851 0.950426952 5 27 122 0.945945946 1.243038049 0.027027027 0.24137931 0.405405405 29 1 1 35 3L:582823-582892 6 Kah FBtr0072563 582822 583983 CGAATT 6mer3-8 dme-miR-1006-3p 3L - 582829 582863 3'utr Kah FlyBase G24999.1 TTAAACAAGAGATCCGATCCATTGATCCCCGAGAA 19 582842 0.893208852 4 16 75 0.833333333 1.397940009 0 0.526315789 0.7 19 5 0 25 3L:582829-582863 2 3.5 3191 FBgn0035144 229 9.92 15.31333333 0.015283843 0.352822581 0.22855899 -16 -25 -20.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 3L 582986 582993 - 3L_582986_582993_- 0.64356572 0.64356572 0.64356572 0 Kah FBtr0072563 582822 583983 3L - 582917 583044 3'utr Kah FlyBase G33052.1 CGATTCGACTCGATTCACTCCGATTCGATCTACAGCTCTACAGCTAATCGCACCAAAGATACTTCGATTTAGATGCGCACGCATACTACCTTTATTTACTCGTACTTACCATATACACCAAAAGATAT 70 582985 0.981867481 18 64 470 0.911392405 1.857332496 0.151898734 0.128571429 0.227848101 70 7 0 72 3L:582917-583044 8 Kah FBtr0072563 582822 583983 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 582920 583041 3'utr Kah FlyBase G25000.1 TTCGACTCGATTCACTCCGATTCGATCTACAGCTCTACAGCTAATCGCACCAAAGATACTTCGATTTAGATGCGCACGCATACTACCTTTATTTACTCGTACTTACCATATACACCAAAAGA 62 582971 0.966015266 20 52 398 0.867346939 1.452297671 0.102040816 0.370967742 0.602040816 62 11 2 85 3L:582920-583041 8 33 3192 FBgn0035144 229 9.92 15.31333333 0.144104803 3.326612903 2.154984763 -8 -22 -15 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3L 583302 583308 - 3L_583302_583308_- 0.661615511 0.661615511 0.661615511 0 Kah FBtr0072563 582822 583983 3L - 583217 583365 3'utr Kah FlyBase G33054.1 AAGGCATTGATCGGCTTCCTGCTTCCGGCACGGAAGTCGTTCCAAAACGAGAGAATTTCTAGTCTTTATATTTAAATAAAGCGCACATTTGGCGAGATCGGGAGCATTCCCGATCCCATCCCCTTTTGTGCGTGGCGTTACTTTAAGCA 267 583309 0.864403061 18 255 2569 0.952229299 2.174641193 0.544585987 0.119850187 0.251592357 267 14 1 299 3L:583217-583365 7 Kah FBtr0072563 582822 583983 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3L - 583279 583327 3'utr Kah FlyBase G25003.1 GTTCCAAAACGAGAGAATTTCTAGTCTTTATATTTAAATAAAGCGCACA 180 583309 0.988777763 10 169 1757 0.948412698 1.679427897 0.511904762 0.3 0.5 180 9 4 239 3L:583279-583327 7 207.5 3193 FBgn0035144 229 9.92 15.31333333 0.906113537 20.91733871 13.55028298 1 1 1 0.01 dme-miR-31a-5p 7mer-A1 CTTGCCA 3L 583590 583596 - 3L_583590_583596_- 0.823349562 0.823349562 0.823349562 0 Kah FBtr0072563 582822 583983 3L - 583435 583745 3'utr Kah FlyBase G33055.2 CACAGCTCGTCGAACAGAAGAGTTCCCTCTTCTCGGAAAACTCCAAGGAAGGCGAGGTCATACACAGTAGATATAGAGAGACAAGGTTGGATCGATTCCCGATTGATCGTTTGATCTTCACTTAGTTGTAATAAGAGACTTCTTAGAGACTTGCCAAGAACAGCGACAAAAAACCAATGTAACCAGTATTTTTTTATAGCACATACGATTACCGATCGATCGGAGAGCGAAAGATATAGCATCCCAGCCCCAGACGATCGAACTCCGCAGCCAAGCTACAAACTTTACACATAGTCATCTAGCTTTATGAT 243 583603 0.983808384 46 227 1793 0.934782609 1.809559715 0.170289855 0.111111111 0.217391304 243 15 3 258 3L:583435-583745 7 Kah FBtr0072563 582822 583983 CTTGCCA 7mer-A1 dme-miR-31a-5p 3L - 583507 583705 3'utr Kah FlyBase G25007.1 CTCCAAGGAAGGCGAGGTCATACACAGTAGATATAGAGAGACAAGGTTGGATCGATTCCCGATTGATCGTTTGATCTTCACTTAGTTGTAATAAGAGACTTCTTAGAGACTTGCCAAGAACAGCGACAAAAAACCAATGTAACCAGTATTTTTTTATAGCACATACGATTACCGATCGATCGGAGAGCGAAAGATATAG 172 583603 0.984080487 37 158 1240 0.92519685 2.371067862 0.18503937 0.360465116 0.566929134 172 19 0 235 3L:583507-583705 7 67.5 3194 FBgn0035144 229 9.92 15.31333333 0.294759825 6.804435484 4.407923378 7 7 7 0.01 dme-bantam-3p 6mer3-8 TGATCT 3L 583629 583634 - 3L_583629_583634_- 1 1 1 0 Kah FBtr0072563 582822 583983 3L - 583435 583745 3'utr Kah FlyBase G33055.2 CACAGCTCGTCGAACAGAAGAGTTCCCTCTTCTCGGAAAACTCCAAGGAAGGCGAGGTCATACACAGTAGATATAGAGAGACAAGGTTGGATCGATTCCCGATTGATCGTTTGATCTTCACTTAGTTGTAATAAGAGACTTCTTAGAGACTTGCCAAGAACAGCGACAAAAAACCAATGTAACCAGTATTTTTTTATAGCACATACGATTACCGATCGATCGGAGAGCGAAAGATATAGCATCCCAGCCCCAGACGATCGAACTCCGCAGCCAAGCTACAAACTTTACACATAGTCATCTAGCTTTATGAT 243 583634 0.983808384 46 227 1793 0.934782609 1.809559715 0.170289855 0.111111111 0.217391304 243 15 3 258 3L:583435-583745 6 Kah FBtr0072563 582822 583983 TGATCT 6mer3-8 dme-bantam-3p 3L - 583507 583705 3'utr Kah FlyBase G25007.1 CTCCAAGGAAGGCGAGGTCATACACAGTAGATATAGAGAGACAAGGTTGGATCGATTCCCGATTGATCGTTTGATCTTCACTTAGTTGTAATAAGAGACTTCTTAGAGACTTGCCAAGAACAGCGACAAAAAACCAATGTAACCAGTATTTTTTTATAGCACATACGATTACCGATCGATCGGAGAGCGAAAGATATAG 172 583605 0.984080487 37 158 1240 0.92519685 2.371067862 0.18503937 0.360465116 0.566929134 172 19 0 235 3L:583507-583705 6 57.5 3195 FBgn0035144 229 9.92 15.31333333 0.251091703 5.796370968 3.754897693 0 -29 -14.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 583808 583814 - 3L_583808_583814_- 0.749251515 0.749277688 0.749264601 1.85E-05 Kah FBtr0072563|FBtr0072563|FBtr0072563 582822|582822|582822 583983|583983|583983 3L - 583749 583892 3'utr Kah FlyBase G33056.1 TGCCACTTAATCCAAGTCCTTTCACAGCCCACCAGCCACCACCAATCCAGGACATTTTCTTACTGTAGTCAACGAATATGTGATAATAATGCAAAAGAGCTAAAGTACCATTAGAGAGTAGATGATTCCAGAGCAAAGAGGAGC 148 583816 0.972201018 22 142 839 0.966292135 1.934498451 0.179775281 0.155405405 0.297752809 148 5 1 172 3L:583749-583892 7 Kah FBtr0072563|FBtr0072563|FBtr0072563 582822|582822|582822 583983|583983|583983 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 583755 583844 3'utr Kah FlyBase G25008.1 AGGACATTTTCTTACTGTAGTCAACGAATATGTGATAATAATGCAAAAGAGCTAAAGTACCATTAGAGAGTAGATGATTCCAGAGCAAAG 80 583816 0.721174301 13 74 436 0.938596491 1.552262523 0.192982456 0.3125 0.51754386 80 5 2 107 3L:583755-583844 7 82 3196 FBgn0035144 229 9.92 15.31333333 0.358078603 8.266129032 5.354810623 2 2 2 0.01 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3L 5928249 5928255 + 3L_5928249_5928255_+ 0.620204031 0.620204031 0.620204031 0 Vap-33B FBtr0306383 5926792 5930120 3L + 5928226 5928272 3'utr Vap-33B FlyBase G28311.1 CACCTTTGTCGATTCCGCTCCCATGGTGCTCAAGGAGACCAACATCA 12 5928249 0.967132978 3 12 66 1 1.146128036 0.071428571 0.166666667 0.285714286 12 0 0 14 3L:5928226-5928272 7 Vap-33B FBtr0306383 5926792 5930120 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3L + 5928224 5928263 3'utr Vap-33B FlyBase G21446.1 GTCACCTTTGTCGATTCCGCTCCCATGGTGCTCAAGGAGA 8 5928249 0.816999137 3 8 43 1 0.954242509 0.666666667 0.125 0.222222222 8 0 0 9 3L:5928224-5928263 7 10 3197 FBgn0053523 440.65 33.85333333 51.73666667 0.022693748 0.295391887 0.193286515 0 0 0 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 5929181 5929186 + 3L_5929181_5929186_+ 1 1 1 0 Vap-33B FBtr0306383 5926792 5930120 3L + 5929164 5929231 3'utr Vap-33B FlyBase G28313.1 GTGACGCTGGCGCTGTTGTTCCTGTTGTTTGCCGGCTTCGGCTTTCTGATGTACCAGCAGCTCGGCCA 16 5929180 0.989817243 6 14 141 0.9 0.954242509 0.65 0.125 0.3 16 1 1 18 3L:5929164-5929231 6 Vap-33B FBtr0306383 5926792 5930120 GTTCCT 6mer2-7 dme-miR-276a-3p 3L + 5929164 5929200 3'utr Vap-33B FlyBase G21448.1 GTGACGCTGGCGCTGTTGTTCCTGTTGTTTGCCGGCT 6 5929179 0.945783872 3 6 56 1 0.954242509 0.444444444 0.333333333 0.555555556 6 0 0 9 3L:5929164-5929200 6 9.5 3198 FBgn0053523 440.65 33.85333333 51.73666667 0.02155906 0.280622292 0.183622189 1 2 1.5 0.01 dme-miR-968-5p 6mer3-8 ACTACT 3L 5929744 5929749 + 3L_5929744_5929749_+ 1 1 1 0 Vap-33B FBtr0091475|FBtr0091478|FBtr0091476|FBtr0306383|FBtr0091477 5929285|5929285|5929285|5926792|5929285 5930120|5929902|5929902|5930120|5930120 3L + 5929729 5929801 stop_codon Vap-33B FlyBase G28316.1 ATCGTCAGCCGTGTTACTACTCGTAGTGAAGCCAAAACCCTCAACTGTGCATGCCAGGGTGGTTCGATTTGTT 14 5929773 0.916852711 7 13 96 0.933333333 1.146128036 0.2 0.071428571 0.133333333 14 1 0 14 3L:5929729-5929801 6 Vap-33B FBtr0091475|FBtr0091477|FBtr0306383|FBtr0091476|FBtr0091478 5929285|5929285|5926792|5929285|5929285 5930120|5930120|5930120|5929902|5929902 ACTACT 6mer3-8 dme-miR-968-5p 3L + 5929663 5929798 stop_codon Vap-33B FlyBase G21449.1 ACGGCGGAAACTCCACCACCACTACCATAACCACCTCCCTAGCCACAGTCGACTCAGGCAGAGGCAATCGTCAGCCGTGTTACTACTCGTAGTGAAGCCAAAACCCTCAACTGTGCATGCCAGGGTGGTTCGATTT 16 5929755 0.947848194 9 14 70 0.875 0.720159303 0 0.3125 0.541666667 16 0 3 21 3L:5929663-5929798 6 3.5 3199 FBgn0053523 440.65 33.85333333 51.73666667 0.007942812 0.10338716 0.06765028 -29 -11 -20 0.01 dme-miR-965-3p 8mer-A1 TACGCTTA 3L 5930509 5930516 - 3L_5930509_5930516_- 0.625364919 0.625364919 0.625364919 0 Rcc1 FBtr0077076|FBtr0077075|FBtr0077074 5930260|5930260|5930260 5930578|5930578|5930578 3L - 5930489 5930531 3'utr Rcc1 FlyBase G34677.2 TAAGTTACGAACCCGTACGCTTACCCTACGCTTAAGGAAGGCA 56 5930516 0.964751403 4 54 225 0.974025974 1.574031268 0.038961039 0.321428571 0.506493506 56 1 1 75 3L:5930489-5930531 8 Rcc1 FBtr0077076|FBtr0077075|FBtr0077074 5930260|5930260|5930260 5930578|5930578|5930578 TACGCTTA 8mer-A1 dme-miR-965-3p 3L - 5930446 5930530 3'utr Rcc1 FlyBase G26227.1 AAGTTACGAACCCGTACGCTTACCCTACGCTTAAGGAAGGCAATGAGTAGCCCAGATTCGTAAGATAGATCGGAAATTTTGCTTA 55 5930516 0.963896102 8 53 212 0.962025316 1.880813592 0.063291139 0.381818182 0.569620253 55 3 0 76 3L:5930446-5930530 8 53 3200 FBgn0002638 1072.403333 62.51333333 96.14666667 0.049421704 0.847819132 0.551241159 0 0 0 0.01 dme-miR-965-3p 6mer3-8 TACGCT 3L 5930560 5930565 - 3L_5930560_5930565_- 1 1 1 0 Rcc1 FBtr0077076|FBtr0077075|FBtr0077074 5930260|5930260|5930260 5930578|5930578|5930578 3L - 5930537 5930602 stop_codon Rcc1 FlyBase G34678.1 AAGCGGGGCGGTAAAAAGACATAAGATTGAGTATAAATACGCTGACTTTCCCACTTTGTTTTTGGT 28 5930565 0.949735432 7 26 167 0.939393939 1.491361694 0.454545455 0.178571429 0.303030303 28 2 0 31 3L:5930537-5930602 6 Rcc1 FBtr0077076|FBtr0077075|FBtr0077074 5930260|5930260|5930260 5930578|5930578|5930578 TACGCT 6mer3-8 dme-miR-965-3p 3L - 5930546 5930601 stop_codon Rcc1 FlyBase G26228.1 AGCGGGGCGGTAAAAAGACATAAGATTGAGTATAAATACGCTGACTTTCCCACTTT 25 5930565 0.837341976 6 21 143 0.888888889 1.505149978 0.555555556 0.36 0.555555556 25 4 0 32 3L:5930546-5930601 6 19 3201 FBgn0002638 1072.403333 62.51333333 96.14666667 0.017717215 0.30393516 0.197614755 0 0 0 0.01 dme-miR-277-3p 6mer3-8 TGCATT 3L 6056605 6056610 + 3L_6056605_6056610_+ 0.999999929 1 0.999999964 7.07E-08 tan FBtr0077043|FBtr0333390 6056559|6056559 6056839|6057002 3L + 6056514 6056670 stop_codon tan FlyBase G28320.1 TGAGCAGCCAGCACCAGTTCCTCATGCAACCGGCGGGCTTTGAGTAGAGAGACTGAATGATCCATCAAATACGCCCCACATTGATTTGCATTGCATTAAAACTAGCTAATAGTGCCCAAAAATAAATGTACTGATTACCAATTATGAAGTTAGGATT 59 6056634 0.966458494 19 58 316 0.986842105 1.875061263 0.118421053 0.220338983 0.394736842 59 1 0 75 3L:6056514-6056670 6 tan FBtr0077043|FBtr0333390 6056559|6056559 6056839|6057002 TGCATT 6mer3-8 dme-miR-277-3p 3L + 6056538 6056666 stop_codon tan FlyBase G21452.1 TGCAACCGGCGGGCTTTGAGTAGAGAGACTGAATGATCCATCAAATACGCCCCACATTGATTTGCATTGCATTAAAACTAGCTAATAGTGCCCAAAAATAAATGTACTGATTACCAATTATGAAGTTAG 40 6056605 0.970250306 16 38 243 0.964912281 1.740362689 0.245614035 0.35 0.543859649 40 2 0 55 3L:6056538-6056666 6 8 3202 FBgn0028980 273.6666667 22.15666667 33.94333333 0.029232643 0.361065142 0.235686929 -29 0 -14.5 0.01 dme-miR-277-3p 6mer2-7 GCATTT 3L 6096315 6096320 + 3L_6096315_6096320_+ 1 1 1 0 loj FBtr0301446|FBtr0301447|FBtr0301448 6096261|6096261|6096261 6096517|6096517|6096517 3L + 6096269 6096358 3'utr loj FlyBase G28325.1 AAGATACTTTTCAAAGACTTCGCAACATGTTTCTAAAATTCCATCCGCATTTCCAAGACATTCATTCTATTCTACCTGCTGAATGAGTTT 161 6096307 0.839041418 8 157 1311 0.978947368 1.792391689 0.015789474 0.136645963 0.268421053 161 2 2 186 3L:6096269-6096358 6 loj FBtr0301447|FBtr0301448|FBtr0301446 6096261|6096261|6096261 6096517|6096517|6096517 GCATTT 6mer2-7 dme-miR-277-3p 3L + 6096274 6096351 3'utr loj FlyBase G21455.1 ACTTTTCAAAGACTTCGCAACATGTTTCTAAAATTCCATCCGCATTTCCAAGACATTCATTCTATTCTACCTGCTGAA 103 6096307 0.964130329 10 102 802 0.993006993 2.152288344 0.020979021 0.262135922 0.468531469 103 1 0 142 3L:6096274-6096351 6 122 3203 FBgn0061492 141.6666667 16.32666667 25.11333333 0.861176471 7.47243773 4.85797717 8 8 8 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 6096463 6096469 + 3L_6096463_6096469_+ 0.801970437 0.801970437 0.801970437 0 loj FBtr0301446|FBtr0301446|FBtr0301446|FBtr0301447|FBtr0301447|FBtr0301447|FBtr0301448|FBtr0301448|FBtr0301448 6096261|6096261|6096261|6096261|6096261|6096261|6096261|6096261|6096261 6096517|6096517|6096517|6096517|6096517|6096517|6096517|6096517|6096517 3L + 6096368 6096486 3'utr loj FlyBase G28326.1 ATTTTATCACTGGCTAATTGATCAAGCGCAACTGAGCAGACTTTTTTATAATTGGGACTACTTATGTCATACGAGTTATAGACAGCAAAACTTATTGTGATAAGTGTACATTTGTGTGT 291 6096461 0.983343739 20 277 2110 0.95923913 1.50638202 0.41576087 0.223367698 0.385869565 291 5 10 353 3L:6096368-6096486 7 loj FBtr0301447|FBtr0301447|FBtr0301447|FBtr0301448|FBtr0301448|FBtr0301448|FBtr0301446|FBtr0301446|FBtr0301446 6096261|6096261|6096261|6096261|6096261|6096261|6096261|6096261|6096261 6096517|6096517|6096517|6096517|6096517|6096517|6096517|6096517|6096517 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 6096386 6096480 3'utr loj FlyBase G21456.1 TGATCAAGCGCAACTGAGCAGACTTTTTTATAATTGGGACTACTTATGTCATACGAGTTATAGACAGCAAAACTTATTGTGATAAGTGTACATTT 197 6096461 0.771146132 16 181 1386 0.935153584 1.437750563 0.464163823 0.370558376 0.576791809 197 10 9 274 3L:6096386-6096480 7 144.5 3204 FBgn0061492 141.6666667 16.32666667 25.11333333 1.02 8.850551245 5.753915583 2 2 2 0.01 dme-miR-12-5p 7mer-m8 AATACTC 3L 6169335 6169341 - 3L_6169335_6169341_- 0.666315556 0.67451515 0.670415353 0.005797993 CG10289 FBtr0331790|FBtr0077019 6164914|6167311 6169800|6169800 3L - 6169256 6169403 3'utr CG10289 FlyBase G34702.1 AAGAAAACTGTATTTTGTTTGTAATATGTATTAGTCTGTCGATTTAGTACGCTTTTACTTTCAATACTCTCAATGTGTTAGGCAACCTATGAGCATTACTTAAAGTACCAAAATTCACGCAACGTTTAGAATGCTTAGTTTATATTTG 47 6169348 0.98962322 17 43 418 0.909090909 1.397940009 0.181818182 0.14893617 0.272727273 47 4 1 50 3L:6169256-6169403 7 CG10289 FBtr0077019|FBtr0331790 6167311|6164914 6169800|6169800 AATACTC 7mer-m8 dme-miR-12-5p 3L - 6169302 6169366 3'utr CG10289 FlyBase G26239.1 GTCGATTTAGTACGCTTTTACTTTCAATACTCTCAATGTGTTAGGCAACCTATGAGCATTACTTA 14 6169339 0.988631932 5 10 124 0.8 1 0.4 0.428571429 0.68 14 4 1 20 3L:6169302-6169366 7 13.5 3205 FBgn0035688 1894.98 44.00666667 67.31 0.007124086 0.306771701 0.200564552 7 -2 2.5 0.01 dme-miR-283-5p 6mer2-7 GATATT 3L 6169760 6169765 - 3L_6169760_6169765_- 1 1 1 0 CG10289 FBtr0331791|FBtr0331789|FBtr0331790|FBtr0077019 6169567|6169567|6164914|6167311 6169800|6169800|6169800|6169800 3L - 6169745 6169835 stop_codon CG10289 FlyBase G34706.1 CGAACAATGTTGAAATTGCAACTACGACCACATAAATGCACTTCCTCACCACACCATACATCATTCAAGCGATATTGTGTCGACGAGAAAT 16 6169761 0.961508146 6 16 80 1 1.255272505 0.166666667 0.125 0.222222222 16 0 0 18 3L:6169745-6169835 6 CG10289 FBtr0077019|FBtr0331790 6167311|6164914 6169800|6169800 GATATT 6mer2-7 dme-miR-283-5p 3L - 6169708 6169818 stop_codon CG10289 FlyBase G26241.1 GCAACTACGACCACATAAATGCACTTCCTCACCACACCATACATCATTCAAGCGATATTGTGTCGACGAGAAATTGTAAAAACGCCTTTGATTTGCTCTTTGGTCATTATC 18 6169761 0.735857548 10 17 121 1 1.462397998 0.172413793 0.277777778 0.551724138 18 0 0 29 3L:6169708-6169818 6 7.5 3206 FBgn0035688 1894.98 44.00666667 67.31 0.003957825 0.170428723 0.111424751 -4 -4 -4 0.01 dme-miR-995-5p 6mer3-8 AATTCG 3L 6178832 6178837 - 3L_6178832_6178837_- 0.989375564 0.99946237 0.994418967 0.007132445 CG10274 FBtr0113149 6178675 6179056 3L - 6178810 6178862 3'utr CG10274 FlyBase G34722.1 CAGGAGAACACAGAATACCTATGTGAATTCGACTTAAGTTTAATGATTCTGGT 26 6178835 0.971570844 4 24 144 0.942857143 1.041392685 0.171428571 0.269230769 0.457142857 26 0 2 33 3L:6178810-6178862 6 CG10274 FBtr0113149 6178675 6179056 AATTCG 6mer3-8 dme-miR-995-5p 3L - 6178821 6178861 3'utr CG10274 FlyBase G26257.2 AGGAGAACACAGAATACCTATGTGAATTCGACTTAAGTTTA 15 6178836 0.975184735 3 12 76 0.842105263 0.602059991 0.052631579 0.266666667 0.421052632 15 0 3 16 3L:6178821-6178861 6 16.5 3207 FBgn0035690 331.03 13.22333333 20.28333333 0.049844425 1.247794303 0.81347576 -2 -1 -1.5 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 6178851 6178857 + 3L_6178851_6178857_+ 0.661615645 0.661615645 0.661615645 0 CG7376 FBtr0331788 6178643 6178941 3L + 6178828 6178883 3'utr CG7376 FlyBase G28336.1 AAGTCGAATTCACATAGGTATTCTGTGTTCTCCTGAATAATGTACAGTATTATTTG 7 6178854 0.984311664 5 7 64 1 1.041392685 0.454545455 0.428571429 0.636363636 7 0 0 11 3L:6178828-6178883 7 CG7376 FBtr0331788 6178643 6178941 TGTGTTC 7mer-m8 dme-miR-317-3p 3L + 6178833 6178883 3'utr CG7376 FlyBase G21459.1 GAATTCACATAGGTATTCTGTGTTCTCCTGAATAATGTACAGTATTATTTG 7 6178848 0.990218748 6 7 68 1 1.041392685 0.363636364 0.428571429 0.636363636 7 0 0 11 3L:6178833-6178883 7 5.5 3208 FBgn0035689 292.97 8.566666667 13.15333333 0.018773253 0.642023346 0.418144957 -3 3 0 0.01 dme-miR-283-5p 6mer3-8 TGATAT 3L 6178942 6178947 - 3L_6178942_6178947_- 1 1 1 0 CG10274 FBtr0113149 6178675 6179056 3L - 6178930 6178971 3'utr CG10274 FlyBase G34724.1 AGAACAGTGTGTGTAAGATGGATATGATATAGTTTTAAGCTG 9 6178952 0.885437843 4 8 76 1 1.176091259 0.4 0.222222222 0.533333333 9 0 0 15 3L:6178930-6178971 6 CG10274 FBtr0113149 6178675 6179056 TGATAT 6mer3-8 dme-miR-283-5p 3L - 6178927 6178966 3'utr CG10274 FlyBase G26258.1 AGTGTGTGTAAGATGGATATGATATAGTTTTAAGCTGAAA 10 6178953 0.880486114 5 9 81 1 1.176091259 0.266666667 0.4 0.6 10 0 0 15 3L:6178927-6178966 6 8.5 3209 FBgn0035690 331.03 13.22333333 20.28333333 0.025677431 0.642803126 0.41906327 5 6 5.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 3L 6182276 6182281 - 3L_6182276_6182281_- 1 1 1 0 D19B FBtr0077017 6182174 6182416 3L - 6182243 6182307 3'utr D19B FlyBase G34732.1 CAACTAGTTTTCGTCACTTTGCAATTTGATCTTTTTTGTATTTAAATCCCCCCTTTAAACTGCTT 55 6182282 0.791990291 12 53 692 0.96969697 1.806179974 0.121212121 0.181818182 0.318181818 55 2 0 64 3L:6182243-6182307 6 D19B FBtr0077017 6182174 6182416 TGATCT 6mer3-8 dme-bantam-3p 3L - 6182234 6182299 3'utr D19B FlyBase G26262.1 TTTCGTCACTTTGCAATTTGATCTTTTTTGTATTTAAATCCCCCCTTTAAACTGCTTAAGTTTGTA 39 6182282 0.988137582 9 36 452 0.942307692 1.69019608 0.019230769 0.282051282 0.461538462 39 3 0 49 3L:6182234-6182299 6 41 3210 FBgn0022699 264.21 11.84 18.04333333 0.155179592 3.462837838 2.272307408 1 1 1 0.01 dme-miR-318-3p 7mer-A1 CCAGTGA 3L 6186016 6186022 - 3L_6186016_6186022_- 0.823349562 0.823349562 0.823349562 0 D19A FBtr0077016 6185828 6186380 3L - 6186000 6186031 3'utr D19A FlyBase G34742.1 TTTGCAATACCAGTGATTTTTACAAATATATT 6 6186014 0.928917111 3 6 48 1 1.079181246 0.25 0.833333333 0.916666667 6 0 0 12 3L:6186000-6186031 7 D19A FBtr0077016 6185828 6186380 CCAGTGA 7mer-A1 dme-miR-318-3p 3L - 6185998 6186033 3'utr D19A FlyBase G26266.1 ACTTTGCAATACCAGTGATTTTTACAAATATATTTT 8 6186013 0.986024159 3 6 64 0.8 0.602059991 0.2 0.25 0.4 8 1 1 8 3L:6185998-6186033 7 7 3211 FBgn0022935 233.1233333 8.756666667 13.45 0.030027024 0.79939094 0.520446097 -8 -9 -8.5 0.01 dme-miR-1006-3p 6mer3-8 CGAATT 3L 6186263 6186268 - 3L_6186263_6186268_- 0.507200502 0.507200502 0.507200502 0 D19A FBtr0077016 6185828 6186380 3L - 6186221 6186409 stop_codon D19A FlyBase G34743.1 TGGATGCCCTGAAGATCGACCACGTCTAGGCAGCAGGATTGGCTTTACTTTACTAGCATATATGCATCATAACCTAGCCACATCCATATGTATCCACTTCCAATGCAGCTGACACTGTCCGGAAAAGTTGTAGGCATGCCTCGAATTGCTCTCTAGCTGGATCAGATTGTAGGTTTATAGGCACTCCAG 89 6186263 0.975116679 19 88 566 0.990566038 2.021189299 0.141509434 0.168539326 0.301886792 89 1 0 105 3L:6186221-6186409 6 D19A FBtr0077016 6185828 6186380 CGAATT 6mer3-8 dme-miR-1006-3p 3L - 6186220 6186322 3'utr D19A FlyBase G26267.1 ATGTATCCACTTCCAATGCAGCTGACACTGTCCGGAAAAGTTGTAGGCATGCCTCGAATTGCTCTCTAGCTGGATCAGATTGTAGGTTTATAGGCACTCCAGA 39 6186263 0.927633539 10 38 257 0.983606557 1.77815125 0.213114754 0.435897436 0.639344262 39 1 0 60 3L:6186220-6186322 6 22 3212 FBgn0022935 233.1233333 8.756666667 13.45 0.094370648 2.512371526 1.635687732 -5 -5 -5 0.01 dme-miR-980-3p 6mer2-7 GCAGCT 3L 6186300 6186305 - 3L_6186300_6186305_- 0.938153582 0.994312152 0.966232867 0.039710127 D19A FBtr0077016 6185828 6186380 3L - 6186221 6186409 stop_codon D19A FlyBase G34743.1 TGGATGCCCTGAAGATCGACCACGTCTAGGCAGCAGGATTGGCTTTACTTTACTAGCATATATGCATCATAACCTAGCCACATCCATATGTATCCACTTCCAATGCAGCTGACACTGTCCGGAAAAGTTGTAGGCATGCCTCGAATTGCTCTCTAGCTGGATCAGATTGTAGGTTTATAGGCACTCCAG 89 6186306 0.975116679 19 88 566 0.990566038 2.021189299 0.141509434 0.168539326 0.301886792 89 1 0 105 3L:6186221-6186409 6 D19A FBtr0077016 6185828 6186380 GCAGCT 6mer2-7 dme-miR-980-3p 3L - 6186220 6186322 3'utr D19A FlyBase G26267.1 ATGTATCCACTTCCAATGCAGCTGACACTGTCCGGAAAAGTTGTAGGCATGCCTCGAATTGCTCTCTAGCTGGATCAGATTGTAGGTTTATAGGCACTCCAGA 39 6186306 0.927633539 10 38 257 0.983606557 1.77815125 0.213114754 0.435897436 0.639344262 39 1 0 60 3L:6186220-6186322 6 29 3213 FBgn0022935 233.1233333 8.756666667 13.45 0.124397672 3.311762467 2.156133829 1 1 1 0.01 dme-miR-970-3p 6mer2-7 CTTATG 3L 6192360 6192365 - 3L_6192360_6192365_- 1 0.999958401 0.999979201 2.94E-05 CG13298 FBtr0077015 6192122 6192480 3L - 6192342 6192386 3'utr CG13298 FlyBase G34750.1 TTTAGGGAACTTCTTGCTCTGCTTATGTGTATACCAAATTTTTGC 17 6192364 0.973666618 5 16 148 1 1.301029996 0.1 0.176470588 0.3 17 0 0 20 3L:6192342-6192386 6 CG13298 FBtr0077015 6192122 6192480 CTTATG 6mer2-7 dme-miR-970-3p 3L - 6192347 6192387 3'utr CG13298 FlyBase G26271.1 GTTTAGGGAACTTCTTGCTCTGCTTATGTGTATACCAAATT 11 6192364 0.596580178 6 11 102 1 1.230448921 0.058823529 0.272727273 0.529411765 11 0 0 17 3L:6192347-6192387 6 13 3214 FBgn0035692 547.6666667 75.45333333 115.9233333 0.023737066 0.172291924 0.112143083 -1 -1 -1 0.01 dme-miR-278-3p 6mer3-8 CCCACC 3L 6197743 6197748 + 3L_6197743_6197748_+ 1 1 1 0 Trn FBtr0077001|FBtr0333059|FBtr0077002|FBtr0077000 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 3L + 6197729 6197881 3'utr Trn FlyBase G28354.1 CATGCCATAAAACACCCACCTTCACCCATTAGCGAGCCAAGCAGCAACTTTTTAACTAGACAATTATGTACAAGTATGCGTAATAAGCGTGTCGTCTTTATCTTTAGCCTCCTTAAGTTATTCGATGCAGTTCGAATGTTAAGTTAACATTGA 108 6197757 0.787062014 11 106 421 0.991735537 2.079181246 0.256198347 0.092592593 0.190082645 108 1 0 120 3L:6197729-6197881 6 Trn FBtr0077002|FBtr0077000|FBtr0077001|FBtr0333059 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 CCCACC 6mer3-8 dme-miR-278-3p 3L + 6197738 6197880 3'utr Trn FlyBase G21468.1 AAACACCCACCTTCACCCATTAGCGAGCCAAGCAGCAACTTTTTAACTAGACAATTATGTACAAGTATGCGTAATAAGCGTGTCGTCTTTATCTTTAGCCTCCTTAAGTTATTCGATGCAGTTCGAATGTTAAGTTAACATTG 69 6197757 0.801989952 13 69 302 1 2.049218023 0.294642857 0.434782609 0.651785714 69 0 0 112 3L:6197738-6197880 6 57 3215 FBgn0024921 2762.84 61.57666667 94.85333333 0.020630945 0.92567531 0.600927748 -14 -14 -14 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 6198119 6198125 + 3L_6198119_6198125_+ 0.661615645 0.661615645 0.661615645 0 Trn FBtr0077001|FBtr0333059|FBtr0077002|FBtr0077000 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 3L + 6198007 6198175 3'utr Trn FlyBase G28355.1 AAGCTAGAGGATCTTTGATCTGTAGAACCTCTTTAGGCACACGACTGTCCGCTTACAGCATATAAAATGCCTTTCTTGTGCAGAAAACTTAGTAGGAACCACTAGAAAATTATGTGTTCCGGCCGTACTTAACCGGAGTCAGTGCTATAGCAGATATGCCCCATTCTCC 36 6198117 0.941499819 14 34 234 0.976190476 1.612783857 0.166666667 0.138888889 0.261904762 36 1 0 41 3L:6198007-6198175 7 Trn FBtr0077002|FBtr0077000|FBtr0077001|FBtr0333059 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 TGTGTTC 7mer-m8 dme-miR-317-3p 3L + 6198100 6198133 3'utr Trn FlyBase G21469.1 AGGAACCACTAGAAAATTATGTGTTCCGGCCGTA 7 6198116 0.781381192 2 7 40 1 0.954242509 0.555555556 0.285714286 0.444444444 7 0 0 9 3L:6198100-6198133 7 11.5 3216 FBgn0024921 2762.84 61.57666667 94.85333333 0.004162384 0.186759054 0.121239809 2 3 2.5 0.01 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 6198441 6198448 + 3L_6198441_6198448_+ 0.643565469 0.643565469 0.643565469 0 Trn FBtr0077001|FBtr0333059|FBtr0077002|FBtr0077000 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 3L + 6198398 6198457 3'utr Trn FlyBase G28356.1 GGATTCAATGGCAGGTGCACACAAAATTGTTACAAATCAAACAAAGACTGATGTTCAACT 10 6198450 0.940774064 5 10 43 1 1.176091259 0 0.5 0.666666667 10 0 0 15 3L:6198398-6198457 8 Trn FBtr0077002|FBtr0077000|FBtr0077001|FBtr0333059 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 AAGACTGA 8mer-A1 dme-miR-14-3p 3L + 6198429 6198457 3'utr Trn FlyBase G21470.1 ACAAATCAAACAAAGACTGATGTTCAACT 9 6198449 0.777188964 2 7 40 0.8 0.602059991 0 0.111111111 0.2 9 1 1 8 3L:6198429-6198457 8 8.5 3217 FBgn0024921 2762.84 61.57666667 94.85333333 0.003076544 0.138039301 0.089612033 -9 -8 -8.5 0.01 dme-miR-304-5p 8mer-A1 TGAGATTA 3L 6198831 6198838 + 3L_6198831_6198838_+ 0.625363359 0.625363359 0.625363359 0 Trn FBtr0077001|FBtr0333059|FBtr0077002|FBtr0077000 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 3L + 6198812 6198849 3'utr Trn FlyBase G28359.1 TAGGGAAACATTGTAAAATTGAGATTAGGATTTTGTTG 19 6198830 0.795807157 6 18 138 0.961538462 1.397940009 0.115384615 0.368421053 0.538461538 19 1 0 25 3L:6198812-6198849 8 Trn FBtr0077002|FBtr0077000|FBtr0077001|FBtr0333059 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 TGAGATTA 8mer-A1 dme-miR-304-5p 3L + 6198809 6198859 3'utr Trn FlyBase G21473.1 AAATAGGGAAACATTGTAAAATTGAGATTAGGATTTTGTTGAATATCTTAT 17 6198830 0.969663796 4 16 137 0.966666667 1.462397998 0.2 0.411764706 0.666666667 17 1 0 29 3L:6198809-6198859 8 18 3218 FBgn0024921 2762.84 61.57666667 94.85333333 0.006515035 0.292318519 0.189766657 1 1 1 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 3L 6198893 6198898 + 3L_6198893_6198898_+ 1 1 1 0 Trn FBtr0077001|FBtr0333059|FBtr0077002|FBtr0077000 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 3L + 6198865 6198920 3'utr Trn FlyBase G28360.1 TTCCATTAACTGAATACAAAAGCAACCATTGACTGATCACTTTTTAAAGTATTATT 137 6198893 0.829518982 9 131 540 0.955307263 1.278753601 0 0.233576642 0.413407821 137 0 8 171 3L:6198865-6198920 6 Trn FBtr0077002|FBtr0077000|FBtr0077001|FBtr0333059 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 TTGACT 6mer3-8 dme-miR-1012-3p 3L + 6198862 6198972 3'utr Trn FlyBase G21474.1 ATTTTCCATTAACTGAATACAAAAGCAACCATTGACTGATCACTTTTTAAAGTATTATTATATAATTTTTTTTTGTATAGGGACAAGTGTAATTAATGAACTATTATTATT 130 6198893 0.916817379 13 126 530 0.978947368 2.269512944 0.031578947 0.315384615 0.531578947 130 4 0 186 3L:6198862-6198972 6 127 3219 FBgn0024921 2762.84 61.57666667 94.85333333 0.045967193 2.06246955 1.338909193 0 0 0 0.01 dme-miR-968-5p 6mer3-8 ACTACT 3L 6199085 6199090 + 3L_6199085_6199090_+ 1 1 1 0 Trn FBtr0077001|FBtr0333059|FBtr0077002|FBtr0077000 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 3L + 6199060 6199126 3'utr Trn FlyBase G28362.1 AATTATATGATTAGGTGTAAAGTGTACTACTAAATGAAAACAAAAGTCTTTGAAATTGTCGCGGAAC 138 6199082 0.820391054 4 137 873 0.993939394 2.214843848 0.381818182 0.18115942 0.315151515 138 1 0 164 3L:6199060-6199126 6 Trn FBtr0077002|FBtr0077000|FBtr0077001|FBtr0333059 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 ACTACT 6mer3-8 dme-miR-968-5p 3L + 6199060 6199127 3'utr Trn FlyBase G21475.1 AATTATATGATTAGGTGTAAAGTGTACTACTAAATGAAAACAAAAGTCTTTGAAATTGTCGCGGAACA 113 6199082 0.793437155 5 112 681 0.993548387 2.187520721 0.451612903 0.274336283 0.470967742 113 1 0 154 3L:6199060-6199127 6 96 3220 FBgn0024921 2762.84 61.57666667 94.85333333 0.034746855 1.559032101 1.012088839 3 3 3 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 6199299 6199305 + 3L_6199299_6199305_+ 0.801970437 0.801970437 0.801970437 0 Trn FBtr0077001|FBtr0077001|FBtr0077001|FBtr0333059|FBtr0333059|FBtr0333059|FBtr0077002|FBtr0077002|FBtr0077002|FBtr0077000|FBtr0077000|FBtr0077000 6197720|6197720|6197720|6197720|6197720|6197720|6197720|6197720|6197720|6197720|6197720|6197720 6199596|6199596|6199596|6200385|6200385|6200385|6199596|6199596|6199596|6200385|6200385|6200385 3L + 6199275 6199317 3'utr Trn FlyBase G28364.1 TTTCGTTTCGAAAATGGGGGAACGTGTGATAATAAAGTAACTT 42 6199289 0.986476411 4 40 189 0.978723404 1.361727836 0.170212766 0.095238095 0.191489362 42 0 1 46 3L:6199275-6199317 7 Trn FBtr0077002|FBtr0077002|FBtr0077002|FBtr0077000|FBtr0077000|FBtr0077000|FBtr0077001|FBtr0077001|FBtr0077001|FBtr0333059|FBtr0333059|FBtr0333059 6197720|6197720|6197720|6197720|6197720|6197720|6197720|6197720|6197720|6197720|6197720|6197720 6199596|6199596|6199596|6200385|6200385|6200385|6199596|6199596|6199596|6200385|6200385|6200385 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 6199273 6199317 3'utr Trn FlyBase G21476.1 TATTTCGTTTCGAAAATGGGGGAACGTGTGATAATAAAGTAACTT 40 6199289 0.967639425 2 39 201 0.965517241 1.748188027 0.086206897 0.35 0.551724138 40 2 0 56 3L:6199273-6199317 7 38.5 3221 FBgn0024921 2762.84 61.57666667 94.85333333 0.013934937 0.625236832 0.405889795 10 10 10 0.01 dme-miR-304-5p 7mer-A1 GAGATTA 3L 6486510 6486516 - 3L_6486510_6486516_- 0.823349562 0.823349562 0.823349562 0 CG10147 FBtr0333060 6486165 6486934 3L - 6486483 6486522 3'utr CG10147 FlyBase G34827.1 CAAGAAGAGATTATGAATGGAGACAATAACCCTTAATAAC 5 6486507 0.81015869 4 5 19 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 3L:6486483-6486522 7 CG10147 FBtr0333060 6486165 6486934 GAGATTA 7mer-A1 dme-miR-304-5p 3L - 6486482 6486521 3'utr CG10147 FlyBase G26353.1 AAGAAGAGATTATGAATGGAGACAATAACCCTTAATAACA 6 6486508 0.91971515 4 6 22 1 0.77815125 0 0 0 6 0 0 6 3L:6486482-6486521 7 4.5 3222 FBgn0035702 164.6666667 9.066666667 13.86666667 0.027327935 0.496323529 0.324519231 -9 -8 -8.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3L 6486769 6486774 - 3L_6486769_6486774_- 1 1 1 0 CG10147 FBtr0333060|FBtr0076987 6486165|6486595 6486934|6486934 3L - 6486730 6486787 3'utr CG10147 FlyBase G34828.1 AATTTTTAATAAACTAGTCTTAGTTTCTAATGGCACAAATACATGCCATTTTACCCTT 24 6486768 0.748387282 5 21 251 0.884615385 1.06069784 0.038461538 0.083333333 0.153846154 24 2 1 23 3L:6486730-6486787 6 CG10147 FBtr0076987|FBtr0333060 6486595|6486165 6486934|6486934 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3L - 6486730 6486784 3'utr CG10147 FlyBase G26354.1 TTTTAATAAACTAGTCTTAGTTTCTAATGGCACAAATACATGCCATTTTACCCTT 17 6486767 0.755058102 7 17 162 1 1.397940009 0 0.352941176 0.56 17 0 0 25 3L:6486730-6486784 6 16 3223 FBgn0035702 164.6666667 9.066666667 13.86666667 0.097165992 1.764705882 1.153846154 -6 -7 -6.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 651643 651649 - 3L_651643_651649_- 0.801970435 0.801970437 0.801970436 0 CG3402 FBtr0072559|FBtr0072559|FBtr0072559 651540|651540|651540 652087|652087|652087 3L - 651556 651697 3'utr CG3402 FlyBase G33073.1 AGCCGAACGCAGAGTTGTTGAAAGAAACATACATTCATAGTACATACTTGTGATAAATGACTTTAACTGTGCAGATATGTGCGAAGAAGGCGCATCACTTAAGTTTAAAATTGAGTTTTTAATGTTATATTGCATTTGAATA 219 651650 0.984923939 18 198 1606 0.896296296 1.383815366 0.103703704 0.168949772 0.325925926 219 19 9 242 3L:651556-651697 7 CG3402 FBtr0072559|FBtr0072559|FBtr0072559 651540|651540|651540 652087|652087|652087 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 651593 651675 3'utr CG3402 FlyBase G25015.1 AGAAACATACATTCATAGTACATACTTGTGATAAATGACTTTAACTGTGCAGATATGTGCGAAGAAGGCGCATCACTTAAGTT 158 651650 0.879725045 11 140 1146 0.87398374 1.101989539 0.166666667 0.411392405 0.62195122 158 15 16 215 3L:651593-651675 7 176 3224 FBgn0035148 1763.92 212.3 323.94 0.099777768 0.829015544 0.54331049 1 1 1 0.01 dme-miR-190-5p 6mer2-7 CATATC 3L 651923 651928 - 3L_651923_651928_- 0.993556691 0.999977196 0.996766943 0.004539979 CG3402 FBtr0072559 651540 652087 3L - 651896 651924 3'utr CG3402 FlyBase G33074.1 TCGCACACACATGTAGCCAGACGTAAATG 9 651913 0.769532168 2 8 15 1 1 0 0.111111111 0.2 9 0 0 10 3L:651896-651924 2 CG3402 FBtr0072559 651540 652087 CATATC 6mer2-7 dme-miR-190-5p 3L - 651901 651926 3'utr CG3402 FlyBase G25016.1 TATCGCACACACATGTAGCCAGACGT 6 651913 0.734350192 2 5 11 1 1 0.1 0.5 0.7 6 0 0 10 3L:651901-651926 4 7 3225 FBgn0035148 1763.92 212.3 323.94 0.003968434 0.032972209 0.02160894 -15 -15 -15 0.01 dme-bantam-3p 6mer2-7 GATCTC 3L 651996 652001 - 3L_651996_652001_- 1 1 1 0 CG3402 FBtr0072559 651540 652087 3L - 651944 652165 stop_codon CG3402 FlyBase G33075.1 AAAAAGGCCGTGAGCTACATCCGGAAAAACCCGATACTCAACATGCTGGTGGCCCGCAAGGGCGTGACCTCCACATAAGTGGTGCTCGGAGCAGGGTCTCCACAGACTACAGCAGTATTTAAGCGGCATTTAAACTATCCCCTCCACCGCCCCTCTGGGCTACGGATCTCTTTGCCTCCTGCAACCTATGCGAATACTTAGAACTACCATATTATACATATT 1240 651994 0.990396268 33 1207 8153 0.975703325 2.037426498 0.214194373 0.211290323 0.374680307 1240 25 13 1526 3L:651944-652165 6 CG3402 FBtr0072559 651540 652087 GATCTC 6mer2-7 dme-bantam-3p 3L - 651947 652145 stop_codon CG3402 FlyBase G25017.1 CCGGAAAAACCCGATACTCAACATGCTGGTGGCCCGCAAGGGCGTGACCTCCACATAAGTGGTGCTCGGAGCAGGGTCTCCACAGACTACAGCAGTATTTAAGCGGCATTTAAACTATCCCCTCCACCGCCCCTCTGGGCTACGGATCTCTTTGCCTCCTGCAACCTATGCGAATACTTAGAACTACCATATTATACAT 868 651994 0.960498098 34 848 5864 0.979907264 2.061726568 0.192426584 0.373271889 0.579598145 868 16 10 1268 3L:651947-652145 6 844 3226 FBgn0035148 1763.92 212.3 323.94 0.47847975 3.975506359 2.605420757 -7 -7 -7 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 6549759 6549764 + 3L_6549759_6549764_+ 1 1 1 0 sfl FBtr0076968|FBtr0301562 6548788|6548788 6550104|6550104 3L + 6549746 6549793 3'utr sfl FlyBase G28377.1 CAGAAACTTCTGTGTACCTTAAGCATTTCAAATCCATGCCACGACTGT 7 6549758 0.978295849 3 7 44 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 3L:6549746-6549793 6 sfl FBtr0076968|FBtr0301562 6548788|6548788 6550104|6550104 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 6549741 6549810 3'utr sfl FlyBase G21483.1 AGCCACAGAAACTTCTGTGTACCTTAAGCATTTCAAATCCATGCCACGACTGTGACTTTGTTCCAGCAGT 11 6549757 0.937116701 6 11 69 1 1.146128036 0.071428571 0.272727273 0.428571429 11 0 0 14 3L:6549741-6549810 6 5.5 3227 FBgn0020251 430.2866667 9.026666667 13.86333333 0.012782176 0.609305761 0.396729983 1 2 1.5 0.01 dme-miR-995-5p 6mer3-8 AATTCG 3L 657920 657925 + 3L_657920_657925_+ 0.785393871 0.957311569 0.87135272 0.121564171 Rev1 FBtr0072557 657793 657971 3L + 657848 657957 3'utr Rev1 FlyBase G26877.1 TAATGTAACGCCAAGCTATGAATGCGGCCAGCTGATAATGTTAATGAGCCATTAGTTTATAAGCCATCCATTAATTCGAGCCAAAAATAAAACATTCTGGTAAAGAAAAT 60 657921 0.982377421 15 47 355 0.763157895 1.161368002 0.065789474 0.166666667 0.342105263 60 15 3 58 3L:657848-657957 6 Rev1 FBtr0072557 657793 657971 AATTCG 6mer3-8 dme-miR-995-5p 3L + 657841 657938 3'utr Rev1 FlyBase G20338.1 ATTATAATAATGTAACGCCAAGCTATGAATGCGGCCAGCTGATAATGTTAATGAGCCATTAGTTTATAAGCCATCCATTAATTCGAGCCAAAAATAAA 42 657920 0.980466558 13 34 240 0.828125 1.72427587 0.078125 0.380952381 0.59375 42 11 0 53 3L:657841-657938 6 23.5 3228 FBgn0035150 1798.706667 67.56666667 104.0266667 0.013064943 0.347804637 0.225903614 -1 0 -0.5 0.01 dme-miR-283-5p 6mer2-7 GATATT 3L 6618224 6618229 + 3L_6618224_6618229_+ 0.890413225 1 0.945206612 0.077489569 CG8398 FBtr0076978 6617993 6619113 3L + 6618210 6618253 3'utr CG8398 FlyBase G28394.1 GTTAGTCTTATGGGGATATTGGCCATTACTGTGGCAGTGATTTT 5 6618241 0.99469896 3 4 39 0.833333333 0.698970004 0.333333333 0.2 0.333333333 5 1 0 5 3L:6618210-6618253 6 CG8398 FBtr0076978 6617993 6619113 GATATT 6mer2-7 dme-miR-283-5p 3L + 6618208 6618258 3'utr CG8398 FlyBase G21493.1 ACGTTAGTCTTATGGGGATATTGGCCATTACTGTGGCAGTGATTTTATAGC 6 6618229 0.777592249 4 6 52 1 0.903089987 0 0.333333333 0.5 6 0 0 8 3L:6618208-6618258 6 3.5 3229 FBgn0035708 902.63 43.18666667 66.30333333 0.003877558 0.081043532 0.052787693 -17 -5 -11 0.01 dme-miR-34-5p 6mer3-8 CACTGC 3L 6689797 6689802 - 3L_6689797_6689802_- 1 1 1 0 SP1173 FBtr0076960|FBtr0076959|FBtr0076961|FBtr0076958 6689697|6689325|6689325|6689325 6689965|6689965|6689965|6689965 3L - 6689780 6689812 3'utr SP1173 FlyBase G34844.1 TTGAGGGCAACACTGCTAATAGTTTGTAATGCG 6 6689796 0.797776776 2 6 37 1 0.903089987 0 0.333333333 0.5 6 0 0 8 3L:6689780-6689812 6 SP1173 FBtr0076961|FBtr0076958|FBtr0076960|FBtr0076959 6689325|6689325|6689697|6689325 6689965|6689965|6689965|6689965 CACTGC 6mer3-8 dme-miR-34-5p 3L - 6689714 6689811 3'utr SP1173 FlyBase G26364.1 TGAGGGCAACACTGCTAATAGTTTGTAATGCGTATTTTTGCTAAGTGTATACACCAGGAGGATGAAAAGCAAAGGAGTGGAGACGATTAAAACAAAAA 9 6689796 0.980786037 7 9 66 1 1.113943352 0.307692308 0.333333333 0.538461538 9 0 0 13 3L:6689714-6689811 6 4.5 3230 FBgn0035710 0.666666667 0.03 0.043333333 6.75 150 103.8461538 -6 -6 -6 0.01 dme-miR-283-5p 7mer-m8 TGATATT 3L 6689873 6689879 - 3L_6689873_6689879_- 0.620203677 0.620203677 0.620203677 0 SP1173 FBtr0076960|FBtr0076959|FBtr0076961|FBtr0076958 6689697|6689325|6689325|6689325 6689965|6689965|6689965|6689965 3L - 6689828 6689892 3'utr SP1173 FlyBase G34845.1 AATCGAGTGCGAATGATATTCTTAGTTTTTAAATGTGTACACCACGCCTCGTCCTCCTCCACCTA 17 6689871 0.988633972 7 16 151 1 1.230448921 0.352941176 0 0 17 0 0 17 3L:6689828-6689892 7 SP1173 FBtr0076961|FBtr0076958|FBtr0076960|FBtr0076959 6689325|6689325|6689697|6689325 6689965|6689965|6689965|6689965 TGATATT 7mer-m8 dme-miR-283-5p 3L - 6689853 6689894 3'utr SP1173 FlyBase G26365.1 CAAATCGAGTGCGAATGATATTCTTAGTTTTTAAATGTGTAC 12 6689871 0.724554945 4 11 130 0.928571429 0.812913357 0.642857143 0.166666667 0.285714286 12 0 1 13 3L:6689853-6689894 7 12 3231 FBgn0035710 0.666666667 0.03 0.043333333 18 400 276.9230769 -8 -8 -8 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 6728821 6728826 - 3L_6728821_6728826_- 1 1 1 0 dikar FBtr0303750|FBtr0333047 6728798|6728798 6730470|6730470 3L - 6728816 6728876 3'utr dikar FlyBase G34852.1 TGATAGAACACAAATGATAAAGAGAAGCGATGCGAAATTGCGAAGAGACGGTACCTAGAGC 10 6728825 0.901004864 5 10 28 1 1 0.1 0 0 10 0 0 10 3L:6728816-6728876 6 dikar FBtr0333047|FBtr0303750 6728798|6728798 6730470|6730470 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L - 6728803 6728882 3'utr dikar FlyBase G26369.1 AATAGTTGATAGAACACAAATGATAAAGAGAAGCGATGCGAAATTGCGAAGAGACGGTACCTAGAGCATAAAAGAGCAGC 8 6728839 0.953873151 5 7 28 0.909090909 1 0.090909091 0.25 0.454545455 8 1 0 10 3L:6728803-6728882 6 5 3232 FBgn0261934 1905.406667 25.77666667 39.66 0.002624112 0.193973878 0.126071609 -1 13 6 0.01 dme-miR-33-5p 7mer-A1 AATGCAA 3L 6729690 6729696 - 3L_6729690_6729696_- 0.782911824 0.782911824 0.782911824 0 dikar FBtr0303750|FBtr0333047 6728798|6728798 6730470|6730470 3L - 6729618 6729718 3'utr dikar FlyBase G34857.1 AAGCAGAAAACGAAAGAGAAATAATGCAAAAATTCAAAGAATTACTCTCAAGCCCCCCCTGACTATAATTAGATTTTAGTTTTTTCCAGAACCTAACTCGT 58 6729677 0.982134983 8 53 263 0.936507937 1.770852012 0.111111111 0.051724138 0.126984127 58 4 0 59 3L:6729618-6729718 7 dikar FBtr0333047|FBtr0303750 6728798|6728798 6730470|6730470 AATGCAA 7mer-A1 dme-miR-33-5p 3L - 6729598 6729711 3'utr dikar FlyBase G26371.1 AAACGAAAGAGAAATAATGCAAAAATTCAAAGAATTACTCTCAAGCCCCCCCTGACTATAATTAGATTTTAGTTTTTTCCAGAACCTAACTCGTAACTATAGAACTCGTGTAAA 24 6729677 0.961125274 10 22 112 0.9375 1.176091259 0.03125 0.291666667 0.46875 24 1 1 30 3L:6729598-6729711 7 12.5 3233 FBgn0261934 1905.406667 25.77666667 39.66 0.006560279 0.484934695 0.315179022 -19 -19 -19 0.01 dme-bantam-3p 7mer-A1 GATCTCA 3L 6739185 6739191 - 3L_6739185_6739191_- 0.823349562 0.823349562 0.823349562 0 dikar FBtr0303751 6738526 6740644 3L - 6739164 6739201 5'utr dikar FlyBase G34866.1 AAGTATTGCCGATCTCAGTCTGCCCTCGCCGGTGGCAC 15 6739183 0.721318932 4 15 101 1 1.230448921 0.176470588 0.133333333 0.235294118 15 0 0 17 3L:6739164-6739201 7 dikar FBtr0303751 6738526 6740644 GATCTCA 7mer-A1 dme-bantam-3p 3L - 6739164 6739201 5'utr dikar FlyBase G26378.1 AAGTATTGCCGATCTCAGTCTGCCCTCGCCGGTGGCAC 8 6739182 0.656678179 6 8 55 1 1.041392685 0.090909091 0.25 0.454545455 8 0 0 11 3L:6739164-6739201 7 11.5 3234 FBgn0261934 1905.406667 25.77666667 39.66 0.006035457 0.44613992 0.2899647 -8 -9 -8.5 0.01 dme-miR-278-3p 6mer3-8 CCCACC 3L 6744584 6744589 - 3L_6744584_6744589_- 1 1 1 0 velo FBtr0076950|FBtr0076951|FBtr0076952|FBtr0345025 6744424|6744424|6744424|6744424 6744638|6744638|6744638|6744638 3L - 6744567 6744625 3'utr velo FlyBase G34871.1 TCGCCCTGCGAGCTCGCGATCCGGATGCGCACATGCCCCACCTGCCTGCGCTGCTCCAG 15 6744579 0.920989799 4 14 46 0.954545455 1.322219295 0.227272727 0.466666667 0.636363636 15 1 0 21 3L:6744567-6744625 6 velo FBtr0076950|FBtr0076951|FBtr0076952|FBtr0345025 6744424|6744424|6744424|6744424 6744638|6744638|6744638|6744638 CCCACC 6mer3-8 dme-miR-278-3p 3L - 6744570 6744621 3'utr velo FlyBase G26382.1 CCTGCGAGCTCGCGATCCGGATGCGCACATGCCCCACCTGCCTGCGCTGCTC 10 6744579 0.829664643 4 10 30 1 1.204119983 0.125 0.4 0.625 10 0 0 16 3L:6744570-6744621 6 9 3235 FBgn0035713 1469.223333 41.72 63.81666667 0.006125685 0.215723873 0.141028989 -10 -10 -10 0.01 dme-bantam-3p 6mer3-8 TGATCT 3L 691988 691993 - 3L_691988_691993_- 1 1 1 0 Vti1 FBtr0072607 691484 692021 3L - 691947 692018 3'utr Vti1 FlyBase G33100.1 TTTTAGCTAGCAAACCAATAGCCAATGATCTTAGCCCAAATTCAAATGTTATAGAAGCCTGTCCATTCCAAT 46 691993 0.851656532 9 45 220 0.982758621 1.755874856 0.051724138 0.260869565 0.413793103 46 1 0 57 3L:691947-692018 6 Vti1 FBtr0072607 691484 692021 TGATCT 6mer3-8 dme-bantam-3p 3L - 691950 692007 3'utr Vti1 FlyBase G25043.1 AAACCAATAGCCAATGATCTTAGCCCAAATTCAAATGTTATAGAAGCCTGTCCATTCC 39 691993 0.858704861 7 38 200 0.980392157 1.698970004 0.098039216 0.282051282 0.450980392 39 1 0 50 3L:691950-692007 6 34.5 3236 FBgn0260862 79.26 7.14 10.99 0.435276306 4.831932773 3.13921747 0 0 0 0.01 dme-miR-277-3p 7mer-A1 GCATTTA 3L 6949947 6949953 - 3L_6949947_6949953_- 0.823349562 0.823349562 0.823349562 0 CG10077 FBtr0333083|FBtr0076940 6949489|6949489 6950329|6950329 3L - 6949912 6949975 3'utr CG10077 FlyBase G34894.1 GTGCCGATCATCGATGTTGTTGGCATTTATCTTTCCAGAGCCCTGGGCGTATTTGATTTCTTTA 7 6949943 0.987098377 6 7 62 1 0.84509804 0.285714286 0 0 7 0 0 7 3L:6949912-6949975 7 CG10077 FBtr0076940|FBtr0333083 6949489|6949489 6950329|6950329 GCATTTA 7mer-A1 dme-miR-277-3p 3L - 6949911 6949963 3'utr CG10077 FlyBase G26403.1 GATGTTGTTGGCATTTATCTTTCCAGAGCCCTGGGCGTATTTGATTTCTTTAT 8 6949943 0.987179973 7 8 69 1 1.113943352 0.307692308 0.375 0.615384615 8 0 0 13 3L:6949911-6949963 7 2 3237 FBgn0035720 1853.276667 63.62 96.59333333 0.00107917 0.031436655 0.020705363 -10 -10 -10 0.01 dme-miR-965-3p 7mer-m8 TACGCTT 3L 6950083 6950089 - 3L_6950083_6950089_- 0.620204855 0.620204855 0.620204855 0 CG10077 FBtr0333083|FBtr0076940 6949489|6949489 6950329|6950329 3L - 6950037 6950178 3'utr CG10077 FlyBase G34895.1 ATGTTAGATGAGCGTCGGTGATGTACGTATCGTGTAGATCTCCTCCGCCCACATCATAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTTTTAATTTGATTAATCTCTTTGTTCCCCCCAAAACAAAACAAAACAA 460 6950061 0.982828116 29 428 3238 0.937172775 1.729974286 0.188481675 0.2 0.357766143 460 27 9 537 3L:6950037-6950178 7 CG10077 FBtr0076940|FBtr0333083 6949489|6949489 6950329|6950329 TACGCTT 7mer-m8 dme-miR-965-3p 3L - 6950039 6950186 3'utr CG10077 FlyBase G26404.1 GAGGGAAGATGTTAGATGAGCGTCGGTGATGTACGTATCGTGTAGATCTCCTCCGCCCACATCATAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTTTTAATTTGATTAATCTCTTTGTTCCCCCCAAAACAAAACAAAAC 374 6950061 0.979506461 28 359 2482 0.956603774 1.75076545 0.186792453 0.312834225 0.51509434 374 15 8 507 3L:6950039-6950186 7 143 3238 FBgn0035720 1853.276667 63.62 96.59333333 0.077160633 2.247720843 1.480433432 -28 -28 -28 0.01 dme-bantam-3p 6mer2-7 GATCTC 3L 6950137 6950142 - 3L_6950137_6950142_- 1 1 1 0 CG10077 FBtr0333083|FBtr0076940 6949489|6949489 6950329|6950329 3L - 6950037 6950178 3'utr CG10077 FlyBase G34895.1 ATGTTAGATGAGCGTCGGTGATGTACGTATCGTGTAGATCTCCTCCGCCCACATCATAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTTTTAATTTGATTAATCTCTTTGTTCCCCCCAAAACAAAACAAAACAA 460 6950135 0.982828116 29 428 3238 0.937172775 1.729974286 0.188481675 0.2 0.357766143 460 27 9 537 3L:6950037-6950178 6 CG10077 FBtr0076940|FBtr0333083 6949489|6949489 6950329|6950329 GATCTC 6mer2-7 dme-bantam-3p 3L - 6950039 6950186 3'utr CG10077 FlyBase G26404.1 GAGGGAAGATGTTAGATGAGCGTCGGTGATGTACGTATCGTGTAGATCTCCTCCGCCCACATCATAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTTTTAATTTGATTAATCTCTTTGTTCCCCCCAAAACAAAACAAAAC 374 6950135 0.979506461 28 359 2482 0.956603774 1.75076545 0.186792453 0.312834225 0.51509434 374 15 8 507 3L:6950039-6950186 6 154 3239 FBgn0035720 1853.276667 63.62 96.59333333 0.083096066 2.420622446 1.594312927 -7 -7 -7 0.01 dme-miR-282-5p 8mer-A1 AGAGGCTA 3L 6950305 6950312 - 3L_6950305_6950312_- 0.63790686 0.63790686 0.63790686 0 CG10077 FBtr0333083|FBtr0076940 6949489|6949489 6950329|6950329 3L - 6950218 6950409 stop_codon CG10077 FlyBase G34896.1 CGCAGGCGGCACCCTATATGATGGCGAACGGCGGCGACATCTTTGCCTATCCGCCGCCTCCGCTGCCTGTGCAGAACTAGAGGCCCTGCGGTTCGATAGAGGCTACCAGATTGTAGACCAGCTCTACTGTAATTTCCTTTCCCCACACGAACATTACACGCACATCCGCACACCCACCCGTATTAATTGTAC 403 6950313 0.958740188 22 396 1912 0.985355649 2.673020907 0.40167364 0.153846154 0.286610879 403 7 0 471 3L:6950218-6950409 8 CG10077 FBtr0076940|FBtr0333083 6949489|6949489 6950329|6950329 AGAGGCTA 8mer-A1 dme-miR-282-5p 3L - 6950242 6950335 stop_codon CG10077 FlyBase G26405.1 AACTAGAGGCCCTGCGGTTCGATAGAGGCTACCAGATTGTAGACCAGCTCTACTGTAATTTCCTTTCCCCACACGAACATTACACGCACATCCG 202 6950313 0.889044747 12 196 983 0.98125 2.195899652 0.384375 0.405940594 0.625 202 5 1 314 3L:6950242-6950335 8 280.5 3240 FBgn0035720 1853.276667 63.62 96.59333333 0.151353549 4.408990883 2.903927117 1 1 1 0.01 dme-miR-31a-5p 6mer3-8 TCTTGC 3L 6952884 6952889 - 3L_6952884_6952889_- 0.99999973 1 0.999999865 2.12E-07 CG10077 FBtr0300937 6951802 6953758 3L - 6952775 6952963 3'utr CG10077 FlyBase G34903.1 AATGAGGGGAATGTGTTTGTTCTCCATGCATTGCTGGTTATATGATGTTGTTACTTTTAGTTCGTTTGTTGCTCTCTTGCTCATAGTTTTTAGTTGTGTCTCGTCAATCACATTTTGAGTAACTTAATTGTAAAAAAGCGATTTACTGTCAGTCAAGGAGTCAATGGCCAGCAAAATAATCTTAAAACA 29 6952886 0.992061641 17 25 293 0.9 1.431363764 0.066666667 0.034482759 0.066666667 29 3 0 27 3L:6952775-6952963 6 CG10077 FBtr0300937 6951802 6953758 TCTTGC 6mer3-8 dme-miR-31a-5p 3L - 6952839 6952926 3'utr CG10077 FlyBase G26412.1 TTATATGATGTTGTTACTTTTAGTTCGTTTGTTGCTCTCTTGCTCATAGTTTTTAGTTGTGTCTCGTCAATCACATTTTGAGTAACTT 11 6952886 0.992110176 8 11 120 1 1.146128036 0.071428571 0.181818182 0.357142857 11 0 0 14 3L:6952839-6952926 6 9 3241 FBgn0035720 1853.276667 63.62 96.59333333 0.004856264 0.141464948 0.093174132 -3 -3 -3 0.01 dme-miR-986-5p 6mer2-7 TTCGAG 3L 6953060 6953065 - 3L_6953060_6953065_- 1 1 1 0 CG10077 FBtr0300937 6951802 6953758 3L - 6953011 6953065 3'utr CG10077 FlyBase G34904.1 TTCGAGTGGTTCGATGCCGGGTGGACCATTAAGTCTAACTTATTGAACCCTTTAG 7 6953051 0.960227893 5 7 37 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 3L:6953011-6953065 6 CG10077 FBtr0300937 6951802 6953758 TTCGAG 6mer2-7 dme-miR-986-5p 3L - 6952984 6953063 3'utr CG10077 FlyBase G26413.1 CGAGTGGTTCGATGCCGGGTGGACCATTAAGTCTAACTTATTGAACCCTTTAGTTTGCTGAATGATTCTACGAATCCGAA 6 6953051 0.978366979 4 6 44 1 0.954242509 0.222222222 0.5 0.666666667 6 0 0 9 3L:6952984-6953063 4 4 3242 FBgn0035720 1853.276667 63.62 96.59333333 0.002158339 0.06287331 0.041410725 -14 -14 -14 0.01 dme-miR-8-3p 7mer-m8 CAGTATT 3L 6960126 6960132 - 3L_6960126_6960132_- 0.661615243 0.661615243 0.661615243 0 sgl FBtr0076938 6959552 6960185 3L - 6959923 6960238 stop_codon sgl FlyBase G34914.2 AGTACCAGCGCACCGGACTGCTCCGCTCGTGGGGCATTGTGCCGCAGCTTTAGGCGCGTCGGGCGGCGGAGGTGGTGGCATTTACACTTAAAGTTGGCGAAATTTCCAGTATTTGCGAGACTAAACTGTAAATATCCGTATTCTTTTCTGTAGCTGAGTGTATGTTAGATTGGGTCGATTAAGCTTAAGTTGAATCATGTTTAGGAGAATAGAATCGTTTCAAATCATCAGAGGACTCTGTCAGTTTTAAGTGAAAAGTAAAGTTGAATTCTTGCATTTTGTATATTAGTTTCTAAAGGATATAAGCTTTTAAAAC 273 6960157 0.987713674 41 257 2333 0.941558442 1.860338007 0.217532468 0.10989011 0.211038961 273 15 3 290 3L:6959923-6960238 7 sgl FBtr0076938 6959552 6960185 CAGTATT 7mer-m8 dme-miR-8-3p 3L - 6960047 6960247 stop_codon sgl FlyBase G26419.1 TCGGCAAGAAGTACCAGCGCACCGGACTGCTCCGCTCGTGGGGCATTGTGCCGCAGCTTTAGGCGCGTCGGGCGGCGGAGGTGGTGGCATTTACACTTAAAGTTGGCGAAATTTCCAGTATTTGCGAGACTAAACTGTAAATATCCGTATTCTTTTCTGTAGCTGAGTGTATGTTAGATTGGGTCGATTAAGCTTAAGTTG 155 6960157 0.986679355 32 146 1262 0.948356808 1.828230115 0.234741784 0.309677419 0.497652582 155 9 2 202 3L:6960047-6960247 7 61 3243 FBgn0261445 3785.826667 203.07 312.6666667 0.016112729 0.300389028 0.195095949 25 25 25 0.01 dme-miR-277-3p 7mer-A1 GCATTTA 3L 6960155 6960161 - 3L_6960155_6960161_- 0.823349562 0.823349562 0.823349562 0 sgl FBtr0076938 6959552 6960185 3L - 6959923 6960238 stop_codon sgl FlyBase G34914.2 AGTACCAGCGCACCGGACTGCTCCGCTCGTGGGGCATTGTGCCGCAGCTTTAGGCGCGTCGGGCGGCGGAGGTGGTGGCATTTACACTTAAAGTTGGCGAAATTTCCAGTATTTGCGAGACTAAACTGTAAATATCCGTATTCTTTTCTGTAGCTGAGTGTATGTTAGATTGGGTCGATTAAGCTTAAGTTGAATCATGTTTAGGAGAATAGAATCGTTTCAAATCATCAGAGGACTCTGTCAGTTTTAAGTGAAAAGTAAAGTTGAATTCTTGCATTTTGTATATTAGTTTCTAAAGGATATAAGCTTTTAAAAC 273 6960157 0.987713674 41 257 2333 0.941558442 1.860338007 0.217532468 0.10989011 0.211038961 273 15 3 290 3L:6959923-6960238 7 sgl FBtr0076938 6959552 6960185 GCATTTA 7mer-A1 dme-miR-277-3p 3L - 6960047 6960247 stop_codon sgl FlyBase G26419.1 TCGGCAAGAAGTACCAGCGCACCGGACTGCTCCGCTCGTGGGGCATTGTGCCGCAGCTTTAGGCGCGTCGGGCGGCGGAGGTGGTGGCATTTACACTTAAAGTTGGCGAAATTTCCAGTATTTGCGAGACTAAACTGTAAATATCCGTATTCTTTTCTGTAGCTGAGTGTATGTTAGATTGGGTCGATTAAGCTTAAGTTG 155 6960157 0.986679355 32 146 1262 0.948356808 1.828230115 0.234741784 0.309677419 0.497652582 155 9 2 202 3L:6960047-6960247 7 53.5 3244 FBgn0261445 3785.826667 203.07 312.6666667 0.014131656 0.263455951 0.171108742 -4 -4 -4 0.01 dme-miR-1007-3p 6mer2-7 GAGCTT 3L 6972864 6972869 - 3L_6972864_6972869_- 1 1 1 0 Galphai FBtr0076934 6972748 6973342 3L - 6972760 6972893 3'utr Galphai FlyBase G34927.1 TTCCGGACGTTTATTCTTTGCCAAGAGCTTGACAGCGTTATTTAAGGTGAACCTAAGGCCTGGAGTTGTAAGCCCTAAAATGTAACTAGTAAACTTACTAATATGTTTAGTAATAGCCTAAATAAAAGACAATT 74 6972880 0.976724552 16 72 468 0.974683544 1.886490725 0.113924051 0.067567568 0.126582278 74 2 0 77 3L:6972760-6972893 6 Galphai FBtr0076934 6972748 6973342 GAGCTT 6mer2-7 dme-miR-1007-3p 3L - 6972781 6972892 3'utr Galphai FlyBase G26429.1 TCCGGACGTTTATTCTTTGCCAAGAGCTTGACAGCGTTATTTAAGGTGAACCTAAGGCCTGGAGTTGTAAGCCCTAAAATGTAACTAGTAAACTTACTAATATGTTTAGTAA 45 6972880 0.974621043 12 42 267 0.955223881 1.806179974 0.194029851 0.4 0.597014925 45 3 0 64 3L:6972781-6972892 6 29 3245 FBgn0001104 5741.72 340.2133333 523.18 0.005050751 0.085240633 0.055430253 11 11 11 0.01 dme-miR-8-3p 7mer-A1 AGTATTA 3L 6973292 6973298 - 3L_6973292_6973298_- 0.823349562 0.823349562 0.823349562 0 Galphai FBtr0076934 6972748 6973342 3L - 6973232 6973460 stop_codon Galphai FlyBase G34930.2 AAAGGAGATATACACGCATCTCACCTGCGCCACGGATACGAACAACGTGAAGTTCGTCTTCGATGCCGTCACCGATGTGATCATCAAGAACAATCTGAAACAAATTGGCTTATTCTGAGAGGGCGGCGGAGCACAAGATCATCATTATTTAGCTGGCGTCGTAGTATTAAAGGAAAACGCGCATAAACATTTCCATTAAACGCTAAGAACTCGATACATTTACGCTCGT 78 6973312 0.878313935 29 70 453 0.909090909 1.602059991 0.147727273 0.128205128 0.227272727 78 7 1 80 3L:6973232-6973460 7 Galphai FBtr0076934 6972748 6973342 AGTATTA 7mer-A1 dme-miR-8-3p 3L - 6973286 6973461 stop_codon Galphai FlyBase G26431.1 AAAAGGAGATATACACGCATCTCACCTGCGCCACGGATACGAACAACGTGAAGTTCGTCTTCGATGCCGTCACCGATGTGATCATCAAGAACAATCTGAAACAAATTGGCTTATTCTGAGAGGGCGGCGGAGCACAAGATCATCATTATTTAGCTGGCGTCGTAGTATTAAAGGAA 48 6973301 0.964731954 19 40 282 0.835616438 1.183269844 0.164383562 0.333333333 0.561643836 48 9 3 61 3L:6973286-6973461 7 16.5 3246 FBgn0001104 5741.72 340.2133333 523.18 0.002873703 0.048498981 0.031537903 14 3 8.5 0.01 dme-miR-305-3p 7mer-m8 ATGTGCC 3L 706112 706118 - 3L_706112_706118_- 0.674515655 0.674515655 0.674515655 0 CG13895 FBtr0072605|FBtr0331771 705946|705946 706134|706134 3L - 706090 706170 stop_codon CG13895 FlyBase G33103.1 AAAAAGAGTGAGGAAATGGACAAATCCTTAGAATAAGTACCAAACCAAAAACATGTGCCTTAGGTTATAAGTATGTTTAGA 93 706111 0.922031617 7 92 627 0.982142857 2.041392685 0.026785714 0.150537634 0.294642857 93 2 0 110 3L:706090-706170 7 CG13895 FBtr0331771|FBtr0072605 705946|705946 706134|706134 ATGTGCC 7mer-m8 dme-miR-305-3p 3L - 706091 706167 stop_codon CG13895 FlyBase G25046.1 AAGAGTGAGGAAATGGACAAATCCTTAGAATAAGTACCAAACCAAAAACATGTGCCTTAGGTTATAAGTATGTTTAG 74 706111 0.99217772 6 72 492 0.982142857 2.041392685 0.035714286 0.391891892 0.598214286 74 2 0 110 3L:706091-706167 7 70 3247 FBgn0035158 245.0033333 15.73666667 24.28 0.285710398 4.448210125 2.883031301 -7 -7 -7 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 7123385 7123390 - 3L_7123385_7123390_- 0.730949445 0.730949445 0.730949445 0 msl-3 FBtr0076926|FBtr0076926|FBtr0076926 7123211|7123211|7123211 7123532|7123532|7123532 3L - 7123373 7123404 3'utr msl-3 FlyBase G34937.1 AAAAAGTTTCCTAATGTGATCGTATAATCGAA 10 7123397 0.658593152 5 10 81 1 1.146128036 0.071428571 0.3 0.5 10 0 0 14 3L:7123373-7123404 6 msl-3 FBtr0076926|FBtr0076926|FBtr0076926 7123211|7123211|7123211 7123532|7123532|7123532 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 7123362 7123405 3'utr msl-3 FlyBase G26438.1 AAAAAAGTTTCCTAATGTGATCGTATAATCGAATAATGCCTATA 5 7123395 0.989834517 3 4 43 0.833333333 0.698970004 0 0.2 0.333333333 5 1 0 5 3L:7123362-7123405 6 7.5 3248 FBgn0002775 342.2933333 21.25 32.62333333 0.021911031 0.352941176 0.229896802 7 5 6 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3L 7326478 7326483 - 3L_7326478_7326483_- 1 1 1 0 CG8602 FBtr0076884 7326271 7326891 3L - 7326464 7326496 3'utr CG8602 FlyBase G34969.1 ACAAAAAACATTCAAGACTTGTGCGCCTAGAGC 11 7326475 0.740006783 4 11 51 1 1.176091259 0 0.363636364 0.533333333 11 0 0 15 3L:7326464-7326496 6 CG8602 FBtr0076884 7326271 7326891 AAGACT 6mer3-8 dme-miR-14-3p 3L - 7326450 7326494 3'utr CG8602 FlyBase G26456.1 AAAAAACATTCAAGACTTGTGCGCCTAGAGCAACGAATTGCTATT 12 7326475 0.953117455 5 12 54 1 1.278753601 0 0.416666667 0.631578947 12 0 0 19 3L:7326450-7326494 6 11 3249 FBgn0035763 925.6666667 44.84666667 68.68666667 0.011883327 0.245280214 0.16014753 -8 -8 -8 0.01 dme-miR-11-3p 7mer-m1 TGTGATG 3L 7326760 7326766 - 3L_7326760_7326766_- 0.612071121 0.61207111 0.612071115 0 CG8602 FBtr0332734|FBtr0076884 7326523|7326271 7326891|7326891 3L - 7326647 7326865 3'utr CG8602 FlyBase G34970.3 CGCCCGCAGATCGGATTATTATCGGTTATTTAGTGTAGACATAAAAGTTACTCTCTGCGGGCAATGCGCCTTGGTCCGTTCCACGATGTGATGATGATGTGTGATGTGCGTCTCGAGTCGCAAATTGGTATTTACTAACTGCAATTGTTTGTCATCCGACGATAGGGATATACAATACGCCCTGATCAGCCATGAATCAGTATTGATATGCGATTCGAG 202 7326768 0.817454255 39 189 1523 0.944680851 1.568201724 0.442553191 0.133663366 0.255319149 202 8 5 222 3L:7326647-7326865 7 CG8602 FBtr0332734|FBtr0076884 7326523|7326271 7326891|7326891 TGTGATG 7mer-m1 dme-miR-11-3p 3L - 7326660 7326817 3'utr CG8602 FlyBase G26457.3 TACTCTCTGCGGGCAATGCGCCTTGGTCCGTTCCACGATGTGATGATGATGTGTGATGTGCGTCTCGAGTCGCAAATTGGTATTTACTAACTGCAATTGTTTGTCATCCGACGATAGGGATATACAATACGCCCTGATCAGCCATGAATCAGTATTGA 155 7326768 0.910162018 23 141 1185 0.93220339 1.740362689 0.521186441 0.412903226 0.61440678 155 13 3 220 3L:7326660-7326817 7 112.5 3250 FBgn0035763 925.6666667 44.84666667 68.68666667 0.12153403 2.508547644 1.637872464 2 2 2 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 7329872 7329878 + 3L_7329872_7329878_+ 0.661615645 0.661615645 0.661615645 0 CG42307 FBtr0299691|FBtr0344452|FBtr0299692 7329590|7329590|7329590 7333471|7333471|7333471 3L + 7329847 7329896 3'utr CG42307 FlyBase G28429.1 AAATCAAACCAATACGCACCAGCAATGTGTTCGAAAAACCTGGGCCCAAG 25 7329872 0.833473219 5 24 100 0.962962963 1.414973348 0.074074074 0.08 0.148148148 25 1 0 26 3L:7329847-7329896 7 CG42307 FBtr0299692|FBtr0344452|FBtr0299691 7329590|7329590|7329590 7333471|7333471|7333471 TGTGTTC 7mer-m8 dme-miR-317-3p 3L + 7329847 7329893 3'utr CG42307 FlyBase G21514.1 AAATCAAACCAATACGCACCAGCAATGTGTTCGAAAAACCTGGGCCC 13 7329872 0.904467857 3 12 53 0.933333333 1.146128036 0 0.153846154 0.266666667 13 1 0 14 3L:7329847-7329893 7 19 3251 FBgn0259203 453.5333333 57.31 87.29333333 0.041893282 0.331530274 0.217656942 0 0 0 0.01 dme-bantam-3p 6mer2-7 GATCTC 3L 7331024 7331029 + 3L_7331024_7331029_+ 1 1 1 0 CG42307 FBtr0299691|FBtr0344452|FBtr0299692 7329590|7329590|7329590 7333471|7333471|7333471 3L + 7331001 7331038 3'utr CG42307 FlyBase G28430.1 AGTCAACCCGCTGCACCTCGCCGGATCTCTTTGCGGAC 8 7331031 0.904395887 3 8 47 1 0.954242509 0.444444444 0.125 0.222222222 8 0 0 9 3L:7331001-7331038 6 CG42307 FBtr0299692|FBtr0344452|FBtr0299691 7329590|7329590|7329590 7333471|7333471|7333471 GATCTC 6mer2-7 dme-bantam-3p 3L + 7331005 7331039 3'utr CG42307 FlyBase G21515.1 AACCCGCTGCACCTCGCCGGATCTCTTTGCGGACT 6 7331031 0.717695472 4 6 36 1 1.041392685 0.727272727 0.333333333 0.636363636 6 0 0 11 3L:7331005-7331039 6 7 3252 FBgn0259203 453.5333333 57.31 87.29333333 0.015434367 0.122142733 0.0801894 -7 -7 -7 0.01 dme-miR-184-3p 7mer-A1 CCGTCCA 3L 7333767 7333773 - 3L_7333767_7333773_- 0.823349562 0.823349562 0.823349562 0 CG43780 FBtr0331507|FBtr0331508 7333542|7333542 7334274|7334274 3L - 7333577 7333929 3'utr CG43780 FlyBase G34984.1 AAGAGCCCACTAACCCGTCTGCACCCACCAACCATATCAGTTTTGCATGCAGTACAAATAGTTTCATTAGCAACCAGTTTTGTTCGAGCCGATTCCATTCCATTAATCGCAATCTGACAATGTGCCTTTCACGTAGAGACTCGTAAGAAATTTATACCGTCCAAGTGTCTTTTCTAGCGCCGTAAGATCGAATTGTATTTTTACATTTAATACCCATTTAGGGTAGTCTGTCTACAGATGCTGCATTTAATGTTGTCCAATATTCTACTCGTATGAAAATATCAGTGTCTTGTATCTACTACAAACTCTATACATTTGTATTCGTCCATTAGTTTTGTAATATTGTATTTTGA 1024 7333775 0.879387613 70 996 7404 0.97492163 2.140577871 0.123040752 0.1875 0.347962382 1024 24 8 1244 3L:7333577-7333929 7 CG43780 FBtr0331508|FBtr0331507 7333542|7333542 7334274|7334274 CCGTCCA 7mer-A1 dme-miR-184-3p 3L - 7333662 7333927 3'utr CG43780 FlyBase G26467.3 GAGCCCACTAACCCGTCTGCACCCACCAACCATATCAGTTTTGCATGCAGTACAAATAGTTTCATTAGCAACCAGTTTTGTTCGAGCCGATTCCATTCCATTAATCGCAATCTGACAATGTGCCTTTCACGTAGAGACTCGTAAGAAATTTATACCGTCCAAGTGTCTTTTCTAGCGCCGTAAGATCGAATTGTATTTTTACATTTAATACCCATTTAGGGTAGTCTGTCTACAGATGCTGCATTTAATGTTGTCCAATATTCTAC 825 7333775 0.876668664 50 799 5386 0.967585089 2.298853076 0.132090762 0.349090909 0.564829822 825 35 5 1194 3L:7333662-7333927 7 589.5 3253 FBgn0264302 77.98333333 6.63 10.06333333 7.559307544 88.91402715 58.57899967 2 2 2 0.01 dme-miR-970-3p 6mer3-8 TCTTAT 3L 7333967 7333972 - 3L_7333967_7333972_- 1 1 1 0 CG43780 FBtr0331507|FBtr0331508 7333542|7333542 7334274|7334274 3L - 7333945 7334006 3'utr CG43780 FlyBase G34985.1 ATACTTATACATGCCGGCAATGCTACGAATTGCTTCTTATATATCTCTCTCCCCCCAAAACT 19 7333958 0.930624221 7 17 128 0.923076923 1.079181246 0 0.315789474 0.5 19 1 1 24 3L:7333945-7334006 6 CG43780 FBtr0331508|FBtr0331507 7333542|7333542 7334274|7334274 TCTTAT 6mer3-8 dme-miR-970-3p 3L - 7333934 7333986 3'utr CG43780 FlyBase G26468.1 TGCTACGAATTGCTTCTTATATATCTCTCTCCCCCCAAAACTAATCCTAGCTA 19 7333957 0.874467543 8 17 149 0.846153846 1.342422681 0.115384615 0.315789474 0.5 19 4 0 22 3L:7333934-7333986 6 13.5 3254 FBgn0264302 77.98333333 6.63 10.06333333 0.173113913 2.036199095 1.341503809 -14 -15 -14.5 0.01 dme-miR-184-5p 7mer-m8 TGATAAG 3L 7335590 7335596 - 3L_7335590_7335596_- 0.658999343 0.658999343 0.658999343 0 eco FBtr0076882|FBtr0100278 7335440|7335440 7335670|7335670 3L - 7335557 7335672 stop_codon eco FlyBase G34994.1 GATCGGGGAAATCTATTGAAGCTATTGAATAGCTGGATTGTTTTTGAGTTAGGATTGCTTCGAAACCTGTAATAGTTGATAAGCAAGTGCGATTATGTTACTAGCGGCACGAAGAC 67 7335603 0.977787832 14 61 494 0.906666667 1.230448921 0.28 0.119402985 0.213333333 67 4 3 68 3L:7335557-7335672 7 eco FBtr0076882|FBtr0100278 7335440|7335440 7335670|7335670 TGATAAG 7mer-m8 dme-miR-184-5p 3L - 7335553 7335655 3'utr eco FlyBase G26477.1 GAAGCTATTGAATAGCTGGATTGTTTTTGAGTTAGGATTGCTTCGAAACCTGTAATAGTTGATAAGCAAGTGCGATTATGTTACTAGCGGCACGAAGACGCGC 30 7335602 0.984158829 10 28 218 0.952380952 1.602059991 0.238095238 0.3 0.5 30 2 0 40 3L:7335553-7335655 7 25.5 3255 FBgn0035766 1385.486667 47.26666667 72.42333333 0.018405085 0.539492243 0.35209647 7 6 6.5 0.01 dme-miR-34-5p 6mer2-7 ACTGCC 3L 7341923 7341928 - 3L_7341923_7341928_- 0.999999984 0.999989335 0.999994659 7.57E-06 CG8596 FBtr0332733|FBtr0332732|FBtr0076881 7341882|7341882|7341882 7341977|7341977|7341977 3L - 7341902 7341941 3'utr CG8596 FlyBase G35011.1 ACATCGTTGCAATACTGCCCCTTAAACTAGCTTTAAAATA 11 7341928 0.744206599 5 10 71 0.928571429 1.113943352 0.071428571 0.181818182 0.357142857 11 1 0 13 3L:7341902-7341941 6 CG8596 FBtr0332732|FBtr0076881|FBtr0332733 7341882|7341882|7341882 7341977|7341977|7341977 ACTGCC 6mer2-7 dme-miR-34-5p 3L - 7341903 7341945 3'utr CG8596 FlyBase G26489.1 AGACACATCGTTGCAATACTGCCCCTTAAACTAGCTTTAAAAT 9 7341929 0.759191739 6 9 57 1 1.041392685 0 0.222222222 0.363636364 9 0 0 11 3L:7341903-7341945 6 9.5 3256 FBgn0035767 191.44 11.73333333 17.72 0.049623903 0.809659091 0.536117381 0 1 0.5 0.01 dme-miR-304-5p 7mer-m8 TGAGATT 3L 7352547 7352553 + 3L_7352547_7352553_+ 0.620203442 0.620203442 0.620203442 0 qm FBtr0332729|FBtr0076846|FBtr0302045 7352392|7352392|7352392 7353622|7353622|7353622 3L + 7352526 7352567 5'utr qm FlyBase G28446.1 CTGCAGAAGCTGAAGATATTCTGAGATTTATGTTACCCTTTG 19 7352544 0.706644077 5 16 162 0.954545455 1.322219295 0.181818182 0.157894737 0.272727273 19 1 0 21 3L:7352526-7352567 7 qm FBtr0076846|FBtr0302045|FBtr0332729 7352392|7352392|7352392 7353622|7353622|7353622 TGAGATT 7mer-m8 dme-miR-304-5p 3L + 7352530 7352562 5'utr qm FlyBase G21526.1 AGAAGCTGAAGATATTCTGAGATTTATGTTACC 9 7352544 0.578140011 6 9 72 1 1.079181246 0 0.333333333 0.5 9 0 0 12 3L:7352530-7352562 7 12.5 3257 FBgn0019662 681.67 36.89 56.62 0.018337319 0.338845216 0.220770046 3 3 3 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 3L 7366968 7366973 - 3L_7366968_7366973_- 0.998689501 0.891959827 0.945324664 0.075469295 Sh3beta FBtr0076872|FBtr0076872|FBtr0302546|FBtr0302546|FBtr0076873|FBtr0076873 7366839|7366839|7366839|7366839|7366839|7366839 7367552|7367552|7367552|7367552|7367552|7367552 3L - 7366946 7367049 3'utr Sh3beta FlyBase G35046.1 AATATTTATATTCATTAACTGACATCCAAACAACTTGTATGTACCATTTATACACACCTGTAATAAGGACTCGGAATACTTACTCGGAGCACTTAAGCCTAAGT 28 7366970 0.973398142 14 26 170 0.9375 1.477121255 0.03125 0.142857143 0.25 28 2 0 30 3L:7366946-7367049 6 Sh3beta FBtr0076873|FBtr0076873|FBtr0302546|FBtr0302546|FBtr0076872|FBtr0076872 7366839|7366839|7366839|7366839|7366839|7366839 7367552|7367552|7367552|7367552|7367552|7367552 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 3L - 7366944 7367032 3'utr Sh3beta FlyBase G26514.1 ACTGACATCCAAACAACTTGTATGTACCATTTATACACACCTGTAATAAGGACTCGGAATACTTACTCGGAGCACTTAAGCCTAAGTTG 22 7366956 0.764784787 11 21 118 0.896551724 1.414973348 0.24137931 0.227272727 0.413793103 22 3 0 26 3L:7366944-7367032 6 8 3258 FBgn0035772 3075.326667 262.2333333 402.8 0.00260135 0.030507182 0.019860973 -3 -17 -10 0.01 dme-miR-304-5p 6mer2-7 GAGATT 3L 7367217 7367222 - 3L_7367217_7367222_- 1 1 1 0 Sh3beta FBtr0076872|FBtr0302546|FBtr0076873 7366839|7366839|7366839 7367552|7367552|7367552 3L - 7367166 7367226 3'utr Sh3beta FlyBase G35048.1 CTACGAGATTTATTTAGAGACTTTTTAGACCTTCATCGGTAGAGCATGAAATCGAAGATCT 31 7367203 0.690610512 12 29 286 0.972222222 1.544068044 0.5 0.161290323 0.277777778 31 1 0 35 3L:7367166-7367226 6 Sh3beta FBtr0076873|FBtr0302546|FBtr0076872 7366839|7366839|7366839 7367552|7367552|7367552 GAGATT 6mer2-7 dme-miR-304-5p 3L - 7367190 7367222 3'utr Sh3beta FlyBase G26516.1 GAGATTTATTTAGAGACTTTTTAGACCTTCATC 13 7367202 0.61841244 6 11 127 0.875 0.669006781 0.625 0.230769231 0.375 13 0 2 14 3L:7367190-7367222 6 16.5 3259 FBgn0035772 3075.326667 262.2333333 402.8 0.005365284 0.062921063 0.040963257 -19 -20 -19.5 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 7372650 7372655 + 3L_7372650_7372655_+ 1 1 1 0 akirin FBtr0076849|FBtr0302545|FBtr0076848|FBtr0302543|FBtr0332730|FBtr0302544 7372590|7372590|7372590|7372590|7372590|7372590 7373711|7372783|7372783|7373711|7373711|7373711 3L + 7372615 7372704 3'utr akirin FlyBase G28467.1 CAGAAAGAAGAAATTAATAATTGCACTACGATCTTATGTGACGGTAGATCTACCGCGACAACAACAGCCCTCATAAACTATAACAAACAA 319 7372651 0.824285241 14 305 2285 0.960835509 2.565847819 0.274151436 0.169278997 0.308093995 319 15 0 368 3L:7372615-7372704 6 akirin FBtr0332730|FBtr0302544|FBtr0076848|FBtr0302543|FBtr0076849|FBtr0302545 7372590|7372590|7372590|7372590|7372590|7372590 7373711|7373711|7372783|7373711|7373711|7372783 ATGTGA 6mer3-8 dme-miR-1003-3p 3L + 7372620 7372709 3'utr akirin FlyBase G21547.1 AGAAGAAATTAATAATTGCACTACGATCTTATGTGACGGTAGATCTACCGCGACAACAACAGCCCTCATAAACTATAACAAACAACAAAT 242 7372651 0.960643368 14 229 1656 0.949602122 2.076761772 0.265251989 0.396694215 0.612732095 242 17 2 358 3L:7372620-7372709 6 266 3260 FBgn0082598 6331.316667 435.1366667 666.7366667 0.042013378 0.611302196 0.398958109 -1 -1 -1 0.01 dme-miR-190-5p 6mer3-8 ACATAT 3L 7372874 7372879 + 3L_7372874_7372879_+ 1 1 1 0 akirin FBtr0076849|FBtr0302543|FBtr0332730|FBtr0302544 7372590|7372590|7372590|7372590 7373711|7373711|7373711|7373711 3L + 7372857 7372909 3'utr akirin FlyBase G28468.1 AGTTTATGCCTAGATTTACATATATATATTGTATCGGTTAGCAGCAAAGGGAT 5 7372874 0.986273534 5 5 37 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3L:7372857-7372909 6 akirin FBtr0332730|FBtr0302544|FBtr0302543|FBtr0076849 7372590|7372590|7372590|7372590 7373711|7373711|7373711|7373711 ACATAT 6mer3-8 dme-miR-190-5p 3L + 7372876 7372910 3'utr akirin FlyBase G21548.1 ATATATATATTGTATCGGTTAGCAGCAAAGGGATG 5 7372892 0.966750128 4 4 25 0.75 0.77815125 0.5 0.6 0.75 5 2 0 6 3L:7372876-7372910 3 2.5 3261 FBgn0082598 6331.316667 435.1366667 666.7366667 0.000394863 0.005745321 0.003749606 0 -18 -9 0.01 dme-miR-965-3p 7mer-m8 TACGCTT 3L 7373545 7373551 + 3L_7373545_7373551_+ 0.620204855 0.620204855 0.620204855 0 akirin FBtr0076849|FBtr0302543|FBtr0332730|FBtr0302544 7372590|7372590|7372590|7372590 7373711|7373711|7373711|7373711 3L + 7373517 7373587 3'utr akirin FlyBase G28471.1 AAGTTAAATTGAACGCTTTCTTATAAAATACGCTTGACAGAAGATGTTTCATGTTCATTGCAATTATTTTT 121 7373545 0.984754637 13 115 903 0.958041958 1.835690571 0.244755245 0.157024793 0.286713287 121 5 1 137 3L:7373517-7373587 7 akirin FBtr0332730|FBtr0302544|FBtr0302543|FBtr0076849 7372590|7372590|7372590|7372590 7373711|7373711|7373711|7373711 TACGCTT 7mer-m8 dme-miR-965-3p 3L + 7373500 7373572 3'utr akirin FlyBase G21551.1 TATAAAAGTTATTCATTAAGTTAAATTGAACGCTTTCTTATAAAATACGCTTGACAGAAGATGTTTCATGTTC 70 7373545 0.981879236 9 68 504 0.968421053 1.963787827 0.210526316 0.285714286 0.473684211 70 3 0 92 3L:7373500-7373572 7 78 3262 FBgn0082598 6331.316667 435.1366667 666.7366667 0.012319712 0.179254027 0.116987716 0 0 0 0.01 dme-miR-999-3p 7mer-m8 AGTTAAC 3L 7374139 7374145 - 3L_7374139_7374145_- 0.674483287 0.674514203 0.674498745 2.18E-05 SMSr FBtr0076870 7374048 7374593 3L - 7374107 7374153 3'utr SMSr FlyBase G35057.1 GTATTTTTAGTTAACTAGTGTTAAGTTTGGAAAGTTTCTGTTGAACG 36 7374128 0.816255122 5 35 372 0.975 1.591064607 0.2 0.111111111 0.2 36 1 0 39 3L:7374107-7374153 7 SMSr FBtr0076870 7374048 7374593 AGTTAAC 7mer-m8 dme-miR-999-3p 3L - 7374110 7374151 3'utr SMSr FlyBase G26526.1 ATTTTTAGTTAACTAGTGTTAAGTTTGGAAAGTTTCTGTTGA 17 7374128 0.800305017 3 17 174 1 1.380211242 0.083333333 0.352941176 0.541666667 17 0 0 24 3L:7374110-7374151 7 11 3263 FBgn0052380 477.4766667 22.27333333 34.04333333 0.023037775 0.493864113 0.323117595 -17 -17 -17 0.01 dme-miR-283-5p 8mer-m1 TGATATTT 3L 7374497 7374504 - 3L_7374497_7374504_- 0.555593841 0.555593841 0.555593841 0 SMSr FBtr0076870 7374048 7374593 3L - 7374434 7374536 3'utr SMSr FlyBase G35059.1 AAAGCAAACATGCAGAAACTAACCATACCGACTGATATTTTTATTTCGAAATTTCCATCGATCCCCTTCCTTTCACAGCTCTCCCCTGTATTATTGACAGCAT 85 7374501 0.74484519 15 78 602 0.923913043 1.452297671 0.141304348 0.070588235 0.141304348 85 5 2 85 3L:7374434-7374536 8 SMSr FBtr0076870 7374048 7374593 TGATATTT 8mer-m1 dme-miR-283-5p 3L - 7374487 7374548 3'utr SMSr FlyBase G26530.2 GTCGCTCTTCGAAAAGCAAACATGCAGAAACTAACCATACCGACTGATATTTTTATTTCGAA 40 7374511 0.976968592 5 36 228 0.964285714 1.73239376 0.071428571 0.375 0.553571429 40 2 0 54 3L:7374487-7374548 8 49.5 3264 FBgn0052380 477.4766667 22.27333333 34.04333333 0.103669987 2.222388506 1.454029178 -3 7 2 0.01 dme-miR-283-5p 8mer-m1 TGATATTT 3L 7432789 7432796 - 3L_7432789_7432796_- 0.555593841 0.555593841 0.555593841 0 Rac2 FBtr0332800 7432760 7433931 3L - 7432731 7432813 3'utr Rac2 FlyBase G35065.1 GATGTTAATTTATATACTGATATTTATGTTAAATAAATGCATACATTTTGCCAATTTGTTTTAACGAAAGAGAGCGAGCGGTA 18 7432800 0.990313268 12 18 182 1 1.322219295 0.285714286 0.166666667 0.285714286 18 0 0 21 3L:7432731-7432813 8 Rac2 FBtr0332800 7432760 7433931 TGATATTT 8mer-m1 dme-miR-283-5p 3L - 7432770 7432807 3'utr Rac2 FlyBase G26533.1 AATTTATATACTGATATTTATGTTAAATAAATGCATAC 8 7432799 0.947867172 4 8 76 1 1.204119983 0.0625 0.625 0.8125 8 0 0 16 3L:7432770-7432807 8 10.5 3265 FBgn0014011 1633.203333 85.34333333 130.3833333 0.006429083 0.123032457 0.080531765 4 3 3.5 0.01 dme-miR-7-5p 7mer-m8 GTCTTCC 3L 7432877 7432883 - 3L_7432877_7432883_- 0.705950313 0.705950313 0.705950313 0 Rac2 FBtr0332800 7432760 7433931 3L - 7432867 7432916 3'utr Rac2 FlyBase G35067.1 CGTGTGAATGTGTGTGTGTGTGTCTGATCAATGGTCTTCCCGCTCAACGC 26 7432885 0.844410001 3 23 227 0.9 1.130333768 0.733333333 0.153846154 0.266666667 26 2 1 27 3L:7432867-7432916 7 Rac2 FBtr0332800 7432760 7433931 GTCTTCC 7mer-m8 dme-miR-7-5p 3L - 7432817 7432997 3'utr Rac2 FlyBase G26534.1 TGGCCAATATCTGAACAATCGGGGAATGTGGGAAGCCGACAAAAAAAGAACTTTCATTTATACATATAGTATTTAGAGTTACGTGTGAATGTGTGTGTGTGTGTCTGATCAATGGTCTTCCCGCTCAACGCATTTGCCTGGACTTGATTTAATGTATACTAAATGCACAATTAGCCTCTAC 50 7432885 0.980889737 16 49 348 0.986486486 1.86332286 0.378378378 0.32 0.540540541 50 1 0 73 3L:7432817-7432997 7 21.5 3266 FBgn0014011 1633.203333 85.34333333 130.3833333 0.013164313 0.251923603 0.164898377 2 2 2 0.01 dme-miR-305-5p 6mer3-8 AGTACA 3L 752605 752610 + 3L_752605_752610_+ 1 1 1 0 emc FBtr0072578 752306 753492 3L + 752541 752630 3'utr emc FlyBase G26886.1 TAGTTTAAACATTTAATAACAAGAATACAACAACACAAAACCTAGCATTAGAGCAGCGTAAGCAAGTACACATTATGATTATTAATTAAA 14 752613 0.966877354 7 14 78 1 1.146128036 0.142857143 0 0 14 0 0 14 3L:752541-752630 6 emc FBtr0072578 752306 753492 AGTACA 6mer3-8 dme-miR-305-5p 3L + 752576 752623 3'utr emc FlyBase G20347.1 CAAAACCTAGCATTAGAGCAGCGTAAGCAAGTACACATTATGATTATT 9 752613 0.766173566 3 9 46 1 1.146128036 0.142857143 0.444444444 0.642857143 9 0 0 14 3L:752576-752623 6 7 3267 FBgn0000575 1770.966667 105.6933333 162.6966667 0.003952644 0.066229343 0.043024852 -8 -8 -8 0.01 dme-bantam-3p 6mer3-8 TGATCT 3L 753256 753261 + 3L_753256_753261_+ 0.993193581 0.935047099 0.96412034 0.041115784 emc FBtr0072578 752306 753492 3L + 753227 753288 3'utr emc FlyBase G26889.1 CCTATAAATATATATTAATATATGTTCTGTGATCTGTAGCATACTTTGTACAAAGTGTTTTT 1016 753260 0.66567851 18 959 10456 0.947533281 1.827512865 0.247454973 0.203740157 0.366483947 1016 50 17 1210 3L:753227-753288 6 emc FBtr0072578 752306 753492 TGATCT 6mer3-8 dme-bantam-3p 3L + 753224 753287 3'utr emc FlyBase G20350.1 AAACCTATAAATATATATTAATATATGTTCTGTGATCTGTAGCATACTTTGTACAAAGTGTTTT 771 753261 0.715575089 17 727 7850 0.942783945 1.812520152 0.222886422 0.367055772 0.583262169 771 51 16 1104 3L:753224-753287 6 877 3268 FBgn0000575 1770.966667 105.6933333 162.6966667 0.495209772 8.297590513 5.390399312 -4 -5 -4.5 0.01 dme-miR-980-5p 7mer-A1 AAAAACA 3L 753361 753367 + 3L_753361_753367_+ 0.782911824 0.782911824 0.782911824 0 emc FBtr0072578 752306 753492 3L + 753295 753386 3'utr emc FlyBase G26890.1 ATAATTATGCGATTTTAATTATGATCCGCAATCGAAATTACACATTTTTGTTCTCATTTCGATGGTAAAAACACTCTATCATGATGTAAAAA 11 753342 0.988918706 7 11 100 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 3L:753295-753386 7 emc FBtr0072578 752306 753492 AAAAACA 7mer-A1 dme-miR-980-5p 3L + 753334 753364 3'utr emc FlyBase G20351.1 ACACATTTTTGTTCTCATTTCGATGGTAAAA 5 753346 0.929513036 4 4 37 0.833333333 0.698970004 0.166666667 0.2 0.333333333 5 1 0 5 3L:753334-753364 4 3.5 3269 FBgn0000575 1770.966667 105.6933333 162.6966667 0.001976322 0.033114671 0.021512426 19 15 17 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA 3L 753408 753413 + 3L_753408_753413_+ 1 1 1 0 emc FBtr0072578 752306 753492 3L + 753398 753427 3'utr emc FlyBase G26891.1 AGAAAACATTTGATGATGTTGCGAAAAAAT 6 753411 0.793961073 3 6 38 1 0.954242509 0.333333333 0.333333333 0.555555556 6 0 0 9 3L:753398-753427 6 emc FBtr0072578 752306 753492 TGATGA 6mer3-8 dme-miR-2a-2-5p 3L + 753396 753422 3'utr emc FlyBase G20352.1 AAAGAAAACATTTGATGATGTTGCGAA 5 753413 0.854041908 2 4 24 1 0.84509804 0.142857143 0.4 0.571428571 5 0 0 7 3L:753396-753422 6 5 3270 FBgn0000575 1770.966667 105.6933333 162.6966667 0.002823317 0.047306673 0.030732037 -3 -5 -4 0.01 dme-miR-995-5p 6mer2-7 ATTCGG 3L 7538105 7538110 + 3L_7538105_7538110_+ 1 1 1 0 lqf FBtr0112941|FBtr0331834|FBtr0076795|FBtr0331836|FBtr0076796|FBtr0331833|FBtr0076798|FBtr0331838|FBtr0076794|FBtr0076797|FBtr0331837|FBtr0331835 7537034|7537034|7537034|7537034|7537034|7536739|7537034|7536739|7537034|7537034|7537034|7536739 7538279|7540012|7538279|7538279|7538279|7538279|7538279|7538279|7538279|7538279|7538279|7538279 3L + 7538044 7538148 3'utr lqf FlyBase G28524.1 TATAAGAGTAACTTAATGATAAACAAAATATACATATATATATATATATAAAAGAAAGCCGATTCGGTGTGAAATTATGCTTAAGAGATTTACATGCCTGACTAG 13 7538106 0.981933574 7 12 87 0.933333333 1.146128036 0.4 0.076923077 0.2 13 1 0 14 3L:7538044-7538148 6 lqf FBtr0076794|FBtr0076797|FBtr0331837|FBtr0331835|FBtr0076798|FBtr0331838|FBtr0076795|FBtr0076796|FBtr0331836|FBtr0112941|FBtr0331834|FBtr0331833 7537034|7537034|7537034|7536739|7537034|7536739|7537034|7537034|7537034|7537034|7537034|7536739 7538279|7538279|7538279|7538279|7538279|7538279|7538279|7538279|7538279|7538279|7540012|7538279 ATTCGG 6mer2-7 dme-miR-995-5p 3L + 7538093 7538137 3'utr lqf FlyBase G21584.1 AAAAGAAAGCCGATTCGGTGTGAAATTATGCTTAAGAGATTTACA 7 7538106 0.969268682 3 7 42 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 3L:7538093-7538137 6 7 3271 FBgn0028582 1900.05 62.33333333 95.30333333 0.003684114 0.112299465 0.073449687 -1 -1 -1 0.01 dme-miR-965-3p 6mer3-8 TACGCT 3L 7777471 7777476 - 3L_7777471_7777476_- 1 1 1 0 CG32369 FBtr0304992 7777103 7778469 3L - 7777455 7777499 3'utr CG32369 FlyBase G35102.1 ATGAACCTATATATAAAGTGCTATACGCTAAATGCTTATTTCTGT 25 7777476 0.837950856 4 25 169 1 1.491361694 0 0.16 0.322580645 25 0 0 31 3L:7777455-7777499 6 CG32369 FBtr0304992 7777103 7778469 TACGCT 6mer3-8 dme-miR-965-3p 3L - 7777449 7777577 3'utr CG32369 FlyBase G26553.1 CTGAACTATGTCCCTCTCTATAACACCCCTACTCTCTCTTGATTATGCTTAGGCTAACTAAATGATATGCTCACCTATATGAACCTATATATAAAGTGCTATACGCTAAATGCTTATTTCTGTATTCGT 18 7777476 0.982965206 8 17 126 1 1.380211242 0.041666667 0.277777778 0.458333333 18 0 0 24 3L:7777449-7777577 6 17 3272 FBgn0052369 1823.153333 38.16 58.06666667 0.009324504 0.445492662 0.292766935 0 0 0 0.01 dme-miR-92b-3p 7mer-A1 TGCAATA 3L 7777742 7777748 - 3L_7777742_7777748_- 0.782911824 0.782911824 0.782911824 0 CG32369 FBtr0304992 7777103 7778469 3L - 7777721 7777757 3'utr CG32369 FlyBase G35105.1 AAGACAATCTGCAATATTTTTTTGATATACCTAAACG 6 7777750 0.990802709 3 4 45 0.714285714 0.698970004 0 0.166666667 0.285714286 6 2 0 5 3L:7777721-7777757 7 CG32369 FBtr0304992 7777103 7778469 TGCAATA 7mer-A1 dme-miR-92b-3p 3L - 7777724 7777772 3'utr CG32369 FlyBase G26555.1 AGCGGCTGGAACTCTAAGACAATCTGCAATATTTTTTTGATATACCTAA 5 7777750 0.990979677 3 4 51 0.8 0.602059991 0.2 0 0 5 1 0 4 3L:7777724-7777772 7 5 3273 FBgn0052369 1823.153333 38.16 58.06666667 0.002742501 0.131027254 0.086107922 2 2 2 0.01 dme-bantam-3p 7mer-A1 GATCTCA 3L 7814496 7814502 - 3L_7814496_7814502_- 0.823349562 0.823349562 0.823349562 0 Pdp1 FBtr0076775|FBtr0076777|FBtr0306535|FBtr0300500|FBtr0346536|FBtr0076776|FBtr0076782|FBtr0332082|FBtr0332081|FBtr0076780|FBtr0332083|FBtr0332080|FBtr0300499 7814335|7814335|7811456|7814335|7811913|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335 7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325 3L - 7814478 7814526 3'utr Pdp1 FlyBase G35131.1 AATATATAATGAAAACCATACATGGATCTCAAGACAGAGTTAAAGAAAT 18 7814504 0.783370631 2 17 74 0.944444444 1.230448921 0 0 0 18 1 0 17 3L:7814478-7814526 7 Pdp1 FBtr0332080|FBtr0076782|FBtr0076780|FBtr0332082|FBtr0332081|FBtr0332083|FBtr0300499|FBtr0076775|FBtr0076777|FBtr0300500|FBtr0306535|FBtr0076776|FBtr0346536 7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7811456|7814335|7811913 7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325 GATCTCA 7mer-A1 dme-bantam-3p 3L - 7814486 7814520 3'utr Pdp1 FlyBase G26585.1 TAATGAAAACCATACATGGATCTCAAGACAGAGTT 17 7814505 0.73199212 3 17 64 1 1.380211242 0.083333333 0.352941176 0.541666667 17 0 0 24 3L:7814486-7814520 7 17.5 3274 FBgn0016694 2143.56 56.17 86.44 0.008163989 0.31155421 0.202452568 2 3 2.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 3L 7814945 7814950 - 3L_7814945_7814950_- 1 1 1 0 Pdp1 FBtr0076775|FBtr0076777|FBtr0306535|FBtr0300500|FBtr0346536|FBtr0076776|FBtr0076782|FBtr0332082|FBtr0332081|FBtr0076780|FBtr0332083|FBtr0332080|FBtr0300499 7814335|7814335|7811456|7814335|7811913|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335 7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325 3L - 7814927 7814974 3'utr Pdp1 FlyBase G35133.2 TTTGTTATACATTTGAGTTACATTTACCTGCATACAATTATATAGAAA 148 7814952 0.730174722 9 142 1137 0.968085106 1.959041392 0.468085106 0.236486486 0.39893617 148 5 1 182 3L:7814927-7814974 6 Pdp1 FBtr0332080|FBtr0076782|FBtr0076780|FBtr0332082|FBtr0332081|FBtr0332083|FBtr0300499|FBtr0076775|FBtr0076777|FBtr0300500|FBtr0306535|FBtr0076776|FBtr0346536 7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7811456|7814335|7811913 7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 3L - 7814927 7814971 3'utr Pdp1 FlyBase G26587.1 GTTATACATTTGAGTTACATTTACCTGCATACAATTATATAGAAA 101 7814952 0.727914561 4 96 769 0.953947368 1.559308011 0.513157895 0.306930693 0.539473684 101 4 3 145 3L:7814927-7814971 6 123.5 3275 FBgn0016694 2143.56 56.17 86.44 0.057614436 2.198682571 1.428736696 2 2 2 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3L 7815088 7815094 - 3L_7815088_7815094_- 0.521223855 0.521223855 0.521223855 0 Pdp1 FBtr0076775|FBtr0076777|FBtr0306535|FBtr0300500|FBtr0346536|FBtr0076776|FBtr0076782|FBtr0332082|FBtr0332081|FBtr0076780|FBtr0332083|FBtr0332080|FBtr0300499 7814335|7814335|7811456|7814335|7811913|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335 7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325 3L - 7815066 7815117 3'utr Pdp1 FlyBase G35134.1 CAAGAAAAAACTATTTCTTTTGGTGTGATTTGCAAGATCTTAAACAAACAAT 18 7815088 0.912340412 7 17 176 0.96 1.380211242 0.28 0.222222222 0.44 18 1 0 24 3L:7815066-7815117 7 Pdp1 FBtr0332080|FBtr0076782|FBtr0076780|FBtr0332082|FBtr0332081|FBtr0332083|FBtr0300499|FBtr0076775|FBtr0076777|FBtr0300500|FBtr0306535|FBtr0076776|FBtr0346536 7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7811456|7814335|7811913 7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 7815069 7815114 3'utr Pdp1 FlyBase G26588.1 GAAAAAACTATTTCTTTTGGTGTGATTTGCAAGATCTTAAACAAAC 12 7815088 0.67966725 7 12 110 1 1.204119983 0.3125 0.333333333 0.5 12 0 0 16 3L:7815069-7815114 7 15 3276 FBgn0016694 2143.56 56.17 86.44 0.006997705 0.267046466 0.173530773 -6 -6 -6 0.01 dme-miR-2a-2-5p 6mer2-7 GATGAG 3L 7815509 7815514 - 3L_7815509_7815514_- 0.999997984 0.999999304 0.999998644 9.19E-07 Pdp1 FBtr0076775|FBtr0076777|FBtr0306535|FBtr0300500|FBtr0346536|FBtr0076776|FBtr0076782|FBtr0332082|FBtr0332081|FBtr0076780|FBtr0332083|FBtr0332080|FBtr0300499 7814335|7814335|7811456|7814335|7811913|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335 7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325 3L - 7815447 7815530 3'utr Pdp1 FlyBase G35136.1 GAGAAAACCATTTAGAGATGAGCAAAGAACTTCCCTCCTCAGTTGCCGGGCACTTGGCAGCTGTTTAGTTTAAGTGAGCTATGA 2007 7815500 0.896605909 20 1986 11319 0.990959966 2.583954069 0.38484718 0.132037867 0.250107619 2007 16 5 2302 3L:7815447-7815530 6 Pdp1 FBtr0332080|FBtr0076782|FBtr0076780|FBtr0332082|FBtr0332081|FBtr0332083|FBtr0300499|FBtr0076775|FBtr0076777|FBtr0300500|FBtr0306535|FBtr0076776|FBtr0346536 7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7811456|7814335|7811913 7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325 GATGAG 6mer2-7 dme-miR-2a-2-5p 3L - 7815451 7815530 3'utr Pdp1 FlyBase G26589.1 GAGAAAACCATTTAGAGATGAGCAAAGAACTTCCCTCCTCAGTTGCCGGGCACTTGGCAGCTGTTTAGTTTAAGTGAGCT 1172 7815500 0.892653631 17 1154 6502 0.984278495 2.398683876 0.381246491 0.366040956 0.582818641 1172 22 6 1753 3L:7815451-7815530 6 895 3277 FBgn0016694 2143.56 56.17 86.44 0.417529717 15.93377248 10.35400278 -14 -14 -14 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 7896274 7896279 - 3L_7896274_7896279_- 1 1 1 0 pbl FBtr0076771|FBtr0076771|FBtr0076771|FBtr0076774|FBtr0076774|FBtr0076774|FBtr0076773|FBtr0076773|FBtr0076773|FBtr0112817|FBtr0112817|FBtr0112817|FBtr0076772|FBtr0076772|FBtr0076772|FBtr0306647|FBtr0306647|FBtr0306647 7896107|7896107|7896107|7896107|7896107|7896107|7896107|7896107|7896107|7896107|7896107|7896107|7896107|7896107|7896107|7896107|7896107|7896107 7896723|7896723|7896723|7896723|7896723|7896723|7896723|7896723|7896723|7896723|7896723|7896723|7896723|7896723|7896723|7896723|7896723|7896723 3L - 7896256 7896308 3'utr pbl FlyBase G35156.1 CGGTCGGATGATCGCCACACCGCAACAAGCTGTGAATGTTTACTGAGTAAATT 45 7896272 0.693468466 4 44 237 1 1.716003344 0.115384615 0.133333333 0.25 45 0 0 52 3L:7896256-7896308 6 pbl FBtr0076772|FBtr0076772|FBtr0076772|FBtr0306647|FBtr0306647|FBtr0306647|FBtr0076773|FBtr0076773|FBtr0076773|FBtr0112817|FBtr0112817|FBtr0112817|FBtr0076771|FBtr0076771|FBtr0076771|FBtr0076774|FBtr0076774|FBtr0076774 7896107|7896107|7896107|7896107|7896107|7896107|7896107|7896107|7896107|7896107|7896107|7896107|7896107|7896107|7896107|7896107|7896107|7896107 7896723|7896723|7896723|7896723|7896723|7896723|7896723|7896723|7896723|7896723|7896723|7896723|7896723|7896723|7896723|7896723|7896723|7896723 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 7896254 7896304 3'utr pbl FlyBase G26601.1 CGGATGATCGCCACACCGCAACAAGCTGTGAATGTTTACTGAGTAAATTTT 25 7896272 0.838594826 5 25 118 1 1.544068044 0.285714286 0.32 0.514285714 25 0 0 35 3L:7896254-7896304 6 34 3278 FBgn0003041 731.33 22.66666667 34.57666667 0.04649064 1.5 0.983322086 -7 -7 -7 0.01 dme-miR-1012-3p 6mer2-7 TGACTA 3L 7896355 7896360 - 3L_7896355_7896360_- 1 1 1 0 pbl FBtr0076771|FBtr0076774|FBtr0076773|FBtr0112817|FBtr0076772|FBtr0306647 7896107|7896107|7896107|7896107|7896107|7896107 7896723|7896723|7896723|7896723|7896723|7896723 3L - 7896340 7896379 3'utr pbl FlyBase G35157.1 AATCAACTACTCATTGCAGTGACTAGGGATCGAATTCACG 9 7896366 0.727135316 6 9 48 1 1.041392685 0.090909091 0.111111111 0.272727273 9 0 0 11 3L:7896340-7896379 6 pbl FBtr0076772|FBtr0306647|FBtr0076773|FBtr0112817|FBtr0076771|FBtr0076774 7896107|7896107|7896107|7896107|7896107|7896107 7896723|7896723|7896723|7896723|7896723|7896723 TGACTA 6mer2-7 dme-miR-1012-3p 3L - 7896335 7896478 3'utr pbl FlyBase G26602.1 AGCGTTTGCCCGAGCTGTCGATTGATCATGATTAACTTGTAAATAGTTCTCCATATGTGTACTCCCGTGCCCGTATAATTGTGTCGCGTCGCTAAATGTAATCAACTACTCATTGCAGTGACTAGGGATCGAATTCACGCACGC 31 7896366 0.977227081 13 31 210 1 1.681241237 0.25 0.451612903 0.645833333 31 0 0 48 3L:7896335-7896478 6 9 3279 FBgn0003041 731.33 22.66666667 34.57666667 0.012306346 0.397058824 0.26029114 6 6 6 0.01 dme-miR-277-3p 6mer2-7 GCATTT 3L 7913706 7913711 - 3L_7913706_7913711_- 1 1 1 0 CG8111 FBtr0076770 7913662 7913785 3L - 7913670 7913748 3'utr CG8111 FlyBase G35170.1 ATTTATTGTTGATTTTCATTGTTGAGCCAAATTGATCGCATTTGCCATTTATCCCTCGGCCAATAAAAACTTAACACTT 11 7913717 0.985535566 7 11 86 1 1.113943352 0.153846154 0.090909091 0.230769231 11 0 0 13 3L:7913670-7913748 6 CG8111 FBtr0076770 7913662 7913785 GCATTT 6mer2-7 dme-miR-277-3p 3L - 7913702 7913728 3'utr CG8111 FlyBase G26614.1 GTTGAGCCAAATTGATCGCATTTGCCA 7 7913716 0.937652003 3 6 38 0.916666667 1.041392685 0.666666667 0.428571429 0.666666667 7 1 0 11 3L:7913702-7913728 6 7 3280 FBgn0035825 99.28 9.136666667 13.99333333 0.070507655 0.766143743 0.500238209 6 5 5.5 0.01 dme-miR-980-3p 6mer3-8 GGCAGC 3L 7926341 7926346 - 3L_7926341_7926346_- 1 1 1 0 syd FBtr0332791|FBtr0300412|FBtr0332790|FBtr0345912|FBtr0332787|FBtr0332788|FBtr0076769|FBtr0332789|FBtr0300413|FBtr0332792 7926023|7926023|7926023|7916648|7926023|7926023|7926023|7926023|7926023|7926023 7926733|7926830|7926830|7926733|7926830|7926733|7926733|7927563|7926733|7927563 3L - 7926331 7926392 3'utr syd FlyBase G35174.1 TATATATATAATAAGATTGAAATTTGTAAATTTTATGCGCTCTCCTGGCAGCAAGTTATGTA 34 7926347 0.911096467 5 32 179 0.909090909 1.602059991 0.454545455 0.264705882 0.431818182 34 4 0 40 3L:7926331-7926392 6 syd FBtr0332788|FBtr0076769|FBtr0300413|FBtr0332792|FBtr0345912|FBtr0332789|FBtr0332787|FBtr0300412|FBtr0332790|FBtr0332791 7926023|7926023|7926023|7926023|7916648|7926023|7926023|7926023|7926023|7926023 7926733|7926733|7926733|7927563|7926733|7927563|7926830|7926830|7926830|7926733 GGCAGC 6mer3-8 dme-miR-980-3p 3L - 7926329 7926365 3'utr syd FlyBase G26619.1 AAATTTTATGCGCTCTCCTGGCAGCAAGTTATGTATT 29 7926347 0.898375437 2 28 144 0.931818182 1.612783857 0.5 0.379310345 0.590909091 29 3 0 41 3L:7926329-7926365 6 28.5 3281 FBgn0024187 713.5033333 16.67666667 25.62333333 0.039943752 1.708974615 1.112267465 1 1 1 0.01 dme-miR-8-3p 6mer2-7 AGTATT 3L 7971874 7971879 + 3L_7971874_7971879_+ 1 1 1 0 RNaseX25 FBtr0076752 7971844 7972449 3L + 7971799 7971983 stop_codon RNaseX25 FlyBase G28549.1 TAAACGTCTACAAGTTGCTGCAATTCCTCATGTGGTTCACCTTGTAAACAGGTCGTTGTGTAACCCAAGCTGGGAAGTATTTTGAGGCGCGCCTTAGGAGGACTCATCGTTAACTCCAATTTTATTTGATACTTCCACTGATTTGGTGTGCTGGAGATTCGGAGCTTAACAATCATAAACGAACT 45 7971880 0.980252657 20 43 299 0.95 1.278753601 0.15 0.244444444 0.433333333 45 1 2 57 3L:7971799-7971983 6 RNaseX25 FBtr0076752 7971844 7972449 AGTATT 6mer2-7 dme-miR-8-3p 3L + 7971864 7971909 3'utr RNaseX25 FlyBase G21605.1 CAAGCTGGGAAGTATTTTGAGGCGCGCCTTAGGAGGACTCATCGTT 10 7971893 0.924414782 4 10 43 1 1.176091259 0.066666667 0.5 0.666666667 10 0 0 15 3L:7971864-7971909 6 11 3282 FBgn0010406 524.1133333 38.16 57.97666667 0.020987827 0.288259958 0.189731501 -6 -19 -12.5 0.01 dme-miR-999-3p 6mer2-7 GTTAAC 3L 7972152 7972157 + 3L_7972152_7972157_+ 1 1 1 0 RNaseX25 FBtr0076752 7971844 7972449 3L + 7972086 7972201 3'utr RNaseX25 FlyBase G28550.1 ATTGTTTGGTTATCCATCCACAATTCGATAGGATTATATTGTACTAAATTCTAAACATCGTACGATGTTAACCAATCTGTATTTGATTTCACACTTATTAGTTTGTAAGCTCTCCT 26 7972172 0.88076703 16 23 267 0.892857143 1.397940009 0.071428571 0.076923077 0.142857143 26 3 0 25 3L:7972086-7972201 6 RNaseX25 FBtr0076752 7971844 7972449 GTTAAC 6mer2-7 dme-miR-999-3p 3L + 7972148 7972217 3'utr RNaseX25 FlyBase G21606.1 CGATGTTAACCAATCTGTATTTGATTTCACACTTATTAGTTTGTAAGCTCTCCTTTGTTGACATTAACTT 16 7972169 0.767832501 8 15 170 0.875 1.322219295 0.083333333 0.3125 0.541666667 16 3 0 21 3L:7972148-7972217 6 4.5 3283 FBgn0010406 524.1133333 38.16 57.97666667 0.008585929 0.117924528 0.077617432 -20 -17 -18.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 7972314 7972319 + 3L_7972314_7972319_+ 1 1 1 0 RNaseX25 FBtr0076752|FBtr0076752|FBtr0076752 7971844|7971844|7971844 7972449|7972449|7972449 3L + 7972295 7972325 3'utr RNaseX25 FlyBase G28552.1 AAACTCATATATACTATTTCTGTGACGATTA 6 7972311 0.722315116 2 6 61 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 3L:7972295-7972325 6 RNaseX25 FBtr0076752|FBtr0076752|FBtr0076752 7971844|7971844|7971844 7972449|7972449|7972449 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 7972302 7972337 3'utr RNaseX25 FlyBase G21608.1 TATATACTATTTCTGTGACGATTACCTAATTGTTCT 5 7972323 0.855476523 2 4 46 0.833333333 0.698970004 0 0.2 0.333333333 5 1 0 5 3L:7972302-7972337 6 5.5 3284 FBgn0010406 524.1133333 38.16 57.97666667 0.010493914 0.144129979 0.094865751 3 -9 -3 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT 3L 7972378 7972383 + 3L_7972378_7972383_+ 1 1 1 0 RNaseX25 FBtr0076752 7971844 7972449 3L + 7972378 7972421 3'utr RNaseX25 FlyBase G28553.1 AGCTGTCCAATCATACTGTATCTCTTACTAGTTACTAAGATCAC 39 7972402 0.648500422 7 35 400 0.886363636 1.591064607 0 0.128205128 0.227272727 39 5 0 39 3L:7972378-7972421 5 RNaseX25 FBtr0076752 7971844 7972449 AGCTGT 6mer3-8 dme-miR-1008-3p 3L + 7972381 7972419 3'utr RNaseX25 FlyBase G21609.1 TGTCCAATCATACTGTATCTCTTACTAGTTACTAAGATC 16 7972393 0.725139427 5 13 158 0.842105263 1.204119983 0.052631579 0.1875 0.315789474 16 3 0 16 3L:7972381-7972419 2 2 3285 FBgn0010406 524.1133333 38.16 57.97666667 0.003815969 0.052410901 0.034496637 -24 -15 -19.5 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 3L 7975538 7975543 - 3L_7975538_7975543_- 0.999995667 1 0.999997833 3.04E-06 HP4 FBtr0076764|FBtr0076765 7975436|7975436 7975649|7975741 3L - 7975467 7975566 3'utr HP4 FlyBase G35203.1 CATGTCCAAGATAAACCAAATAGATGTGCGGGGCTATCCTTTTCCTGAATATATATGTATAAGATCCTTATCTAAGACTTTATGCAAATCAAGCTCGATT 69 7975526 0.886387225 19 64 580 0.931034483 1.209515015 0.252873563 0.217391304 0.379310345 69 2 4 81 3L:7975467-7975566 6 HP4 FBtr0076764|FBtr0076765 7975436|7975436 7975649|7975741 ATGTGC 6mer3-8 dme-miR-305-3p 3L - 7975482 7975553 3'utr HP4 FlyBase G26634.1 AACCAAATAGATGTGCGGGGCTATCCTTTTCCTGAATATATATGTATAAGATCCTTATCTAAGACTTTATGC 24 7975526 0.822765226 9 21 195 0.90625 1.462397998 0.3125 0.291666667 0.46875 24 3 0 29 3L:7975482-7975553 6 18.5 3286 FBgn0035829 344.3333333 69.53666667 105.82 0.053727009 0.26604669 0.174825175 -17 -17 -17 0.01 dme-miR-12-5p 7mer-A1 ATACTCA 3L 7975636 7975642 - 3L_7975636_7975642_- 0.823349562 0.823349562 0.823349562 0 HP4 FBtr0076764 7975436 7975649 3L - 7975576 7975664 3'utr HP4 FlyBase G35204.1 AATCTGACAATCTAGTCGTCTCATACTCAAAGAGCAATCAACGCATCCAGCTGACAAACTTCTAATCGCACTTGGAGTCATTCGAAGTA 27 7975654 0.757490723 8 26 150 0.975609756 1.301029996 0.024390244 0.407407407 0.609756098 27 0 1 40 3L:7975576-7975664 7 HP4 FBtr0076764 7975436 7975649 ATACTCA 7mer-A1 dme-miR-12-5p 3L - 7975580 7975661 3'utr HP4 FlyBase G26635.1 CTGACAATCTAGTCGTCTCATACTCAAAGAGCAATCAACGCATCCAGCTGACAAACTTCTAATCGCACTTGGAGTCATTCGA 13 7975654 0.971001432 6 11 66 0.888888889 1.204119983 0 0.307692308 0.5 13 2 0 16 3L:7975580-7975661 7 0.5 3287 FBgn0035829 344.3333333 69.53666667 105.82 0.001452081 0.007190451 0.004725005 12 12 12 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3L 7975648 7975654 - 3L_7975648_7975654_- 0.661614459 0.661613992 0.661614225 3.54E-07 HP4 FBtr0076765 7975436 7975741 3L - 7975576 7975664 3'utr HP4 FlyBase G35204.1 AATCTGACAATCTAGTCGTCTCATACTCAAAGAGCAATCAACGCATCCAGCTGACAAACTTCTAATCGCACTTGGAGTCATTCGAAGTA 27 7975654 0.757490723 8 26 150 0.975609756 1.301029996 0.024390244 0.407407407 0.609756098 27 0 1 40 3L:7975576-7975664 7 HP4 FBtr0076765 7975436 7975741 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3L - 7975580 7975661 3'utr HP4 FlyBase G26635.1 CTGACAATCTAGTCGTCTCATACTCAAAGAGCAATCAACGCATCCAGCTGACAAACTTCTAATCGCACTTGGAGTCATTCGA 13 7975654 0.971001432 6 11 66 0.888888889 1.204119983 0 0.307692308 0.5 13 2 0 16 3L:7975580-7975661 7 2 3288 FBgn0035829 344.3333333 69.53666667 105.82 0.005808325 0.028761804 0.018900019 0 0 0 0.01 dme-miR-304-5p 7mer-m8 TGAGATT 3L 7977838 7977844 - 3L_7977838_7977844_- 0.620203442 0.620203442 0.620203442 0 CG8038 FBtr0076763 7977803 7977984 3L - 7977805 7977983 3'utr CG8038 FlyBase G35208.1 AACTACAGGACCAATCATTAGCCATAGAAATTGAATCCTATTGTAATTTAAGGAAAAAAGTTTATTGGAAAGTTAGCATCGCTTTTCAATAGAAATTTAATAATTGCCCTCAAAGATCCTCTAAAACTTTACTTGTATTTGAGATTGTTGTGTTTAATATATATATAAAACCGTACATT 34 7977845 0.988159393 21 32 302 0.909090909 1.124938737 0.159090909 0.205882353 0.386363636 34 2 2 40 3L:7977805-7977983 7 CG8038 FBtr0076763 7977803 7977984 TGAGATT 7mer-m8 dme-miR-304-5p 3L - 7977810 7977882 3'utr CG8038 FlyBase G26638.1 AATTGCCCTCAAAGATCCTCTAAAACTTTACTTGTATTTGAGATTGTTGTGTTTAATATATATATAAAACCGT 16 7977846 0.986385513 10 16 142 1 1.414973348 0.153846154 0.5 0.692307692 16 0 0 26 3L:7977810-7977882 7 11.5 3289 FBgn0035831 191 28.52666667 43.6 0.060209424 0.403131573 0.263761468 1 2 1.5 0.01 dme-miR-33-5p 6mer3-8 CAATGC 3L 8051365 8051370 + 3L_8051365_8051370_+ 1 1 1 0 nmo FBtr0333223|FBtr0076754 8049922|8048075 8054147|8052669 3L + 8051320 8051406 3'utr nmo FlyBase G28564.1 ATGTAATATAGTTTAATTTTCGACTAACTACACCTCTGTCTCTCTCAATGCTCATCGCTATAGACTATAGCTAAGGTGCAGGACAGG 11 8051380 0.982862939 4 10 85 0.846153846 1.041392685 0.384615385 0.181818182 0.307692308 11 2 0 11 3L:8051320-8051406 6 nmo FBtr0076754|FBtr0333223 8048075|8049922 8052669|8054147 CAATGC 6mer3-8 dme-miR-33-5p 3L + 8051350 8051396 3'utr nmo FlyBase G21617.1 CACCTCTGTCTCTCTCAATGCTCATCGCTATAGACTATAGCTAAGGT 8 8051380 0.963267871 5 8 46 1 1.079181246 0.166666667 0.5 0.666666667 8 0 0 12 3L:8051350-8051396 6 5.5 3290 FBgn0011817 321.4666667 10.13333333 15.55 0.017109083 0.542763158 0.353697749 -15 -15 -15 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG 3L 8087780 8087785 - 3L_8087780_8087785_- 1 0.971565848 0.985782924 0.020106016 CG7565 FBtr0076738 8087633 8087997 3L - 8087650 8087804 3'utr CG7565 FlyBase G35223.1 TATATTATTTTAAGCTGCTGCTGTGCAACAAGTATTATATTTAATGTTTATTTCTACTGCGATACTTTTTATGTGTGTATATAGACATAGCTGTTCACAATCAATGTAACAAACGACATGTAACTGCTTAAAAGTGCATTATTACCCACATTAAA 75 8087787 0.990295055 26 72 728 0.964705882 1.913813852 0.141176471 0.12 0.223529412 75 3 0 82 3L:8087650-8087804 6 CG7565 FBtr0076738 8087633 8087997 GCTGTG 6mer2-7 dme-miR-1008-3p 3L - 8087676 8087803 3'utr CG7565 FlyBase G26650.1 ATATTATTTTAAGCTGCTGCTGTGCAACAAGTATTATATTTAATGTTTATTTCTACTGCGATACTTTTTATGTGTGTATATAGACATAGCTGTTCACAATCAATGTAACAAACGACATGTAACTGCTT 41 8087787 0.904267131 19 39 414 0.947368421 1.73239376 0.140350877 0.341463415 0.526315789 41 3 0 54 3L:8087676-8087803 6 27.5 3291 FBgn0035833 598.6666667 19.29666667 29.46666667 0.045935412 1.4251166 0.933257919 2 2 2 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 8087922 8087928 - 3L_8087922_8087928_- 0.801970437 0.801970437 0.801970437 0 CG7565 FBtr0076738|FBtr0076738|FBtr0076738 8087633|8087633|8087633 8087997|8087997|8087997 3L - 8087806 8087967 3'utr CG7565 FlyBase G35224.1 AAATATGTGTGTGTGTTAGTCGATCTACTATACCGTGTGTGTGATATCTATTTGTATTTCTATAATGTACTCGGATCTTTTGTACTTTCCGCAAAACTCGTCTGAAGTCAAGTTGTCTATAAGTTCCTTTACGTGCAATTATTTTAAGTTAAGAGTCATTCT 110 8087930 0.808693797 30 105 1077 0.955882353 2.113943352 0.132352941 0.209090909 0.360294118 110 6 0 130 3L:8087806-8087967 7 CG7565 FBtr0076738|FBtr0076738|FBtr0076738 8087633|8087633|8087633 8087997|8087997|8087997 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 8087808 8087944 3'utr CG7565 FlyBase G26651.1 TCTACTATACCGTGTGTGTGATATCTATTTGTATTTCTATAATGTACTCGGATCTTTTGTACTTTCCGCAAAACTCGTCTGAAGTCAAGTTGTCTATAAGTTCCTTTACGTGCAATTATTTTAAGTTAAGAGTCATT 70 8087930 0.923504311 17 66 659 0.962962963 1.716003344 0.037037037 0.428571429 0.62962963 70 3 1 104 3L:8087808-8087944 7 52.5 3292 FBgn0035833 598.6666667 19.29666667 29.46666667 0.087694878 2.720677146 1.781674208 2 2 2 0.01 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 8106012 8106018 + 3L_8106012_8106018_+ 0.823349562 0.823349562 0.823349562 0 Ect4 FBtr0304994 8105751 8108836 3L + 8105885 8106045 3'utr Ect4 FlyBase G28597.1 ACTTTCTCACTCAACTCAAGCAACCCATTACAACTACACTATCCATTACTCTTTACTCTTACCAATTAATAATTGATTTAATTCTGATTGCCACACACTCGAAATCGCTTGAAACGCCGTCTCATGCGCAGCTAATCACCAGGCAAATAGGTACCGCCAAT 55 8106009 0.913930648 15 52 347 0.951612903 1.469822016 0.080645161 0.109090909 0.209677419 55 2 1 59 3L:8105885-8106045 7 Ect4 FBtr0304994 8105751 8108836 GCAGCTA 7mer-A1 dme-miR-980-3p 3L + 8105885 8106039 3'utr Ect4 FlyBase G21643.1 ACTTTCTCACTCAACTCAAGCAACCCATTACAACTACACTATCCATTACTCTTTACTCTTACCAATTAATAATTGATTTAATTCTGATTGCCACACACTCGAAATCGCTTGAAACGCCGTCTCATGCGCAGCTAATCACCAGGCAAATAGGTACC 34 8106009 0.987127491 16 28 244 0.777777778 1.544068044 0.155555556 0.303030303 0.488888889 33 10 0 35 3L:8105885-8106039 7 15 3293 FBgn0262579 2855.543333 63.41666667 97.15666667 0.005252941 0.23653088 0.154389817 3 3 3 0.01 dme-miR-995-5p 6mer2-7 ATTCGG 3L 8113843 8113848 - 3L_8113843_8113848_- 1 1 1 0 Arp3 FBtr0076737|FBtr0334087 8113405|8113803 8113955|8113955 3L - 8113816 8113897 3'utr Arp3 FlyBase G35232.1 TGATTTATTGATTTATTCTCCAACTATATATATATATATATACATTGCGATTCGGTATTCCACGCTAAAGTATTAGTAATTA 18 8113848 0.736109722 7 17 182 0.95 1.278753601 0.15 0.111111111 0.2 18 1 0 19 3L:8113816-8113897 6 Arp3 FBtr0076737|FBtr0334087 8113405|8113803 8113955|8113955 ATTCGG 6mer2-7 dme-miR-995-5p 3L - 8113820 8113864 3'utr Arp3 FlyBase G26657.1 ATATATATACATTGCGATTCGGTATTCCACGCTAAAGTATTAGTA 6 8113853 0.995568262 3 4 38 0.777777778 0.84509804 0.222222222 0.5 0.666666667 6 2 0 7 3L:8113820-8113864 6 9 3294 FBgn0262716 1345.763333 82.36666667 125.8 0.006687654 0.109267503 0.07154213 0 5 2.5 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3L 8123643 8123648 - 3L_8123643_8123648_- 1 1 1 0 CG7550 FBtr0076736 8123610 8123736 3L - 8123630 8123668 3'utr CG7550 FlyBase G35244.1 CGTATCAGCCAAGTATCTTCTGTGTTATTTAAATAAAAT 16 8123650 0.65486311 8 14 177 0.875 0.669006781 0.0625 0 0 16 0 2 14 3L:8123630-8123668 6 CG7550 FBtr0076736 8123610 8123736 TGTGTT 6mer3-8 dme-miR-317-3p 3L - 8123630 8123664 3'utr CG7550 FlyBase G26668.1 TCAGCCAAGTATCTTCTGTGTTATTTAAATAAAAT 9 8123650 0.613164019 6 8 89 0.714285714 1 0.285714286 0.333333333 0.571428571 9 4 0 10 3L:8123630-8123664 6 12.5 3295 FBgn0035839 38.33333333 5.32 8.246666667 0.326086957 2.34962406 1.515763945 2 2 2 0.01 dme-miR-283-5p 6mer3-8 TGATAT 3L 8130922 8130927 + 3L_8130922_8130927_+ 1 1 1 0 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 3L + 8130908 8130978 3'utr CdsA FlyBase G28655.1 CTATATATATACATTGATATATATCTGTAAGCAAACGGGCCGGCAGTTTGAGCAGCCACATAAAATAAGTT 10 8130934 0.939983613 6 10 42 1 1.079181246 0.083333333 0.2 0.333333333 10 0 0 12 3L:8130908-8130978 6 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 TGATAT 6mer3-8 dme-miR-283-5p 3L + 8130909 8130964 3'utr CdsA FlyBase G21696.1 TATATATATACATTGATATATATCTGTAAGCAAACGGGCCGGCAGTTTGAGCAGCC 7 8130921 0.967909594 5 6 36 0.888888889 0.903089987 0 0.285714286 0.444444444 7 1 0 8 3L:8130909-8130964 6 3 3296 FBgn0010350 708.1033333 35.43 53.93 0.00423667 0.084674005 0.055627665 -12 1 -5.5 0.01 dme-miR-92b-3p 7mer-m8 GTGCAAT 3L 8131118 8131124 + 3L_8131118_8131124_+ 0.659000077 0.659000077 0.659000077 0 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 3L + 8131095 8131133 3'utr CdsA FlyBase G28656.1 TTTATTTGGCAGAACTCTACACAGTGCAATCGTATTGTT 6 8131112 0.685221027 5 6 38 1 0.77815125 0 0 0 6 0 0 6 3L:8131095-8131133 7 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 GTGCAAT 7mer-m8 dme-miR-92b-3p 3L + 8131096 8131146 3'utr CdsA FlyBase G21697.1 TTATTTGGCAGAACTCTACACAGTGCAATCGTATTGTTAAGCGATTCCATT 8 8131128 0.623481819 7 8 59 1 1.113943352 0.230769231 0.5 0.692307692 8 0 0 13 3L:8131096-8131146 7 6 3297 FBgn0010350 708.1033333 35.43 53.93 0.00847334 0.16934801 0.111255331 6 -10 -2 0.01 dme-miR-1006-3p 7mer-A1 GAATTTA 3L 8131200 8131206 + 3L_8131200_8131206_+ 0.823349562 0.823349562 0.823349562 0 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 3L + 8131151 8131248 3'utr CdsA FlyBase G28657.1 TTAATGCCCTCGTGACAAGGCGTCAAGGCAAGGCAAACAGAATAACTATGAATTTAATATCGACTATGTGTGTGTGCGTGTTGTTAGTGAATTTAATT 39 8131218 0.956039278 15 36 306 0.913043478 1.62324929 0.195652174 0.153846154 0.282608696 39 4 0 42 3L:8131151-8131248 7 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 GAATTTA 7mer-A1 dme-miR-1006-3p 3L + 8131169 8131279 3'utr CdsA FlyBase G21698.1 GGCGTCAAGGCAAGGCAAACAGAATAACTATGAATTTAATATCGACTATGTGTGTGTGCGTGTTGTTAGTGAATTTAATTACGATAACTATAGCTTAGAGATGATCAGGCA 26 8131218 0.988859788 11 23 210 0.87755102 1.633468456 0.306122449 0.615384615 0.795918367 26 6 0 43 3L:8131169-8131279 7 13.5 3298 FBgn0010350 708.1033333 35.43 53.93 0.019065014 0.381033023 0.250324495 -18 -18 -18 0.01 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 3L 8131331 8131337 + 3L_8131331_8131337_+ 0.823349442 0.797796768 0.810573105 0.018068417 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 3L + 8131314 8131406 3'utr CdsA FlyBase G28659.1 AGCGCATTTTAGTTAAATACCTGAGGGACGAAATTATGAGATCAAGATACCAGGAAAACTCTTGCAATGCTGTAATTCTATATATAATAGTGC 56 8131326 0.776535826 11 52 343 0.944444444 1.832508913 0.166666667 0.25 0.416666667 56 4 0 68 3L:8131314-8131406 7 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3L + 8131283 8131409 3'utr CdsA FlyBase G21699.1 AACGCCAGAATCTGGAGATTAGCATAATTAAAGCGCATTTTAGTTAAATACCTGAGGGACGAAATTATGAGATCAAGATACCAGGAAAACTCTTGCAATGCTGTAATTCTATATATAATAGTGCAAT 31 8131334 0.925496026 17 30 216 0.972222222 1.544068044 0.111111111 0.161290323 0.277777778 31 1 0 35 3L:8131283-8131409 7 16.5 3299 FBgn0010350 708.1033333 35.43 53.93 0.023301684 0.465707028 0.30595216 5 -3 1 0.01 dme-miR-33-5p 6mer3-8 CAATGC 3L 8131378 8131383 + 3L_8131378_8131383_+ 0.999999983 0.999999999 0.999999991 0 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 3L + 8131314 8131406 3'utr CdsA FlyBase G28659.1 AGCGCATTTTAGTTAAATACCTGAGGGACGAAATTATGAGATCAAGATACCAGGAAAACTCTTGCAATGCTGTAATTCTATATATAATAGTGC 56 8131381 0.776535826 11 52 343 0.944444444 1.832508913 0.166666667 0.25 0.416666667 56 4 0 68 3L:8131314-8131406 6 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 CAATGC 6mer3-8 dme-miR-33-5p 3L + 8131283 8131409 3'utr CdsA FlyBase G21699.1 AACGCCAGAATCTGGAGATTAGCATAATTAAAGCGCATTTTAGTTAAATACCTGAGGGACGAAATTATGAGATCAAGATACCAGGAAAACTCTTGCAATGCTGTAATTCTATATATAATAGTGCAAT 31 8131381 0.925496026 17 30 216 0.972222222 1.544068044 0.111111111 0.161290323 0.277777778 31 1 0 35 3L:8131283-8131409 6 18.5 3300 FBgn0010350 708.1033333 35.43 53.93 0.02612613 0.522156365 0.343037271 -3 -3 -3 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 3L 8131626 8131632 + 3L_8131626_8131632_+ 0.782911824 0.782911824 0.782911824 0 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 3L + 8131577 8131652 3'utr CdsA FlyBase G28661.1 GGCATTTAAGAACGAAAATGCAATTCGTCGGCGTTTTAAAGAACTAAATGTACAAAGATTTCAATATTAAATCTTA 16 8131625 0.963480593 7 15 82 0.952380952 1.301029996 0.285714286 0.3125 0.476190476 16 1 0 20 3L:8131577-8131652 7 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 GTACAAA 7mer-A1 dme-miR-305-5p 3L + 8131587 8131640 3'utr CdsA FlyBase G21700.1 AACGAAAATGCAATTCGTCGGCGTTTTAAAGAACTAAATGTACAAAGATTTCAA 25 8131625 0.95399064 6 24 125 0.966666667 1.462397998 0.066666667 0.2 0.333333333 25 1 0 29 3L:8131587-8131640 7 17.5 3301 FBgn0010350 708.1033333 35.43 53.93 0.024713907 0.493931696 0.324494715 1 1 1 0.01 dme-miR-14-3p 6mer2-7 AGACTG 3L 8131653 8131658 - 3L_8131653_8131658_- 1 1 1 0 CG7504 FBtr0273367|FBtr0273368 8131427|8131427 8131796|8131796 3L - 8131618 8131696 3'utr CG7504 FlyBase G35266.1 AAAAAAGGCTTTGTTATTTTTATATATATTTAACATAGAGACTGTAAGATTTAATATTGAAATCTTTGTACATTTAGTT 29 8131654 0.987865704 10 27 243 0.933333333 1.447158031 0.066666667 0.034482759 0.066666667 29 2 0 28 3L:8131618-8131696 6 CG7504 FBtr0273367|FBtr0273368 8131427|8131427 8131796|8131796 AGACTG 6mer2-7 dme-miR-14-3p 3L - 8131556 8131679 3'utr CG7504 FlyBase G26681.1 TTTTATATATATTTAACATAGAGACTGTAAGATTTAATATTGAAATCTTTGTACATTTAGTTCTTTAAAACGCCGACGAATTGCATTTTCGTTCTTAAATGCCGTACAGTATAACAGGATTTAT 31 8131654 0.98514446 10 27 227 0.888888889 1.602059991 0.111111111 0.290322581 0.511111111 31 5 0 40 3L:8131556-8131679 6 22.5 3302 FBgn0035842 670.3266667 14.32333333 21.90333333 0.033565724 1.570863393 1.027240907 -4 -4 -4 0.01 dme-miR-184-5p 6mer3-8 TGATAA 3L 8170708 8170713 - 3L_8170708_8170713_- 1 1 1 0 RecQ4 FBtr0076729 8170638 8170818 3L - 8170704 8170731 3'utr RecQ4 FlyBase G35284.1 ATTTTACTCGCACAAGTCTGATAATACA 8 8170709 0.710080714 3 8 39 1 1 0 0.25 0.4 8 0 0 10 3L:8170704-8170731 6 RecQ4 FBtr0076729 8170638 8170818 TGATAA 6mer3-8 dme-miR-184-5p 3L - 8170699 8170727 3'utr RecQ4 FlyBase G26690.1 TACTCGCACAAGTCTGATAATACAAAAAT 5 8170710 0.647048515 2 5 21 1 0.903089987 0 0.4 0.625 5 0 0 8 3L:8170699-8170727 6 6.5 3303 FBgn0040290 522 12.57 19.37666667 0.012452107 0.517104216 0.335455015 -4 -3 -3.5 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 3L 8176224 8176230 - 3L_8176224_8176230_- 0.620204266 0.620204266 0.620204266 0 Nmt FBtr0076728 8176133 8176425 3L - 8176192 8176277 3'utr Nmt FlyBase G35292.1 GGAAAGCCCTTTGCGAGCATACACCTAAATAGCATCATTGTGAAAATTGCATTTTGCAACGGCCAAGCTTCGATATTTTTTACTAC 25 8176240 0.978805433 12 23 159 0.931034483 1.431363764 0.103448276 0.16 0.275862069 25 2 0 27 3L:8176192-8176277 7 Nmt FBtr0076728 8176133 8176425 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 8176197 8176253 3'utr Nmt FlyBase G26696.1 CTAAATAGCATCATTGTGAAAATTGCATTTTGCAACGGCCAAGCTTCGATATTTTTT 14 8176240 0.972144641 5 12 95 0.952380952 1 0 0.357142857 0.571428571 14 0 1 20 3L:8176197-8176253 7 15 3304 FBgn0020392 364.3333333 24.34666667 37.14333333 0.041171089 0.616100767 0.403840976 10 10 10 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3L 8182762 8182768 + 3L_8182762_8182768_+ 0.661615511 0.661615511 0.661615511 0 CG7979 FBtr0076690 8182719 8183369 3L + 8182722 8182779 3'utr CG7979 FlyBase G28669.1 ATTAATTGGGCTTAGCTCTAATTGGTGATGATGGAACGTCTCTAGTCTGCAAATGTAA 31 8182769 0.972768601 3 30 211 0.976744186 1.62324929 0.186046512 0.290322581 0.488372093 31 1 0 42 3L:8182722-8182779 7 CG7979 FBtr0076690 8182719 8183369 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 8182714 8182773 stop_codon CG7979 FlyBase G21706.1 ACCGTAGAATTAATTGGGCTTAGCTCTAATTGGTGATGATGGAACGTCTCTAGTCTGCAA 32 8182769 0.972221591 3 32 193 1 1.672097858 0.063829787 0.34375 0.553191489 32 0 0 47 3L:8182714-8182773 7 26.5 3305 FBgn0035848 289.3333333 16.77666667 25.67333333 0.091589862 1.579574806 1.032199429 -7 -7 -7 0.01 dme-miR-33-5p 7mer-m1 AATGCAC 3L 8182913 8182919 + 3L_8182913_8182919_+ 0.829692068 0.829692068 0.829692068 0 CG7979 FBtr0076690 8182719 8183369 3L + 8182849 8182931 3'utr CG7979 FlyBase G28671.1 TTGAAGTTTTGCGATATATCAGCCTATGTATGGATTAGGAAATAGTGATGTATAAATGCGATCAAATGCACTGAATTCTAGAA 13 8182920 0.978519724 8 13 91 1 1.204119983 0.125 0.153846154 0.3125 13 0 0 16 3L:8182849-8182931 7 CG7979 FBtr0076690 8182719 8183369 AATGCAC 7mer-m1 dme-miR-33-5p 3L + 8182867 8182926 3'utr CG7979 FlyBase G21708.1 TCAGCCTATGTATGGATTAGGAAATAGTGATGTATAAATGCGATCAAATGCACTGAATTC 9 8182920 0.982893126 3 7 55 0.857142857 0.77815125 0.142857143 0.333333333 0.571428571 9 1 1 12 3L:8182867-8182926 7 8 3306 FBgn0035848 289.3333333 16.77666667 25.67333333 0.02764977 0.476852772 0.311607375 -7 -7 -7 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 8190590 8190595 + 3L_8190590_8190595_+ 1 1 1 0 Atg18a FBtr0321321|FBtr0076693|FBtr0321320|FBtr0076692|FBtr0076691|FBtr0321319|FBtr0346547 8189976|8189976|8190267|8189976|8189976|8190267|8189976 8190714|8191118|8190965|8190714|8190714|8190714|8190714 3L + 8190568 8190696 3'utr Atg18a FlyBase G28679.1 CGTTCCTGGCGCTGCCATTGGAATGTGAAATGCTTTTGTCATACACTCCTAAGTTAGTTGTTAATTAATAATTTAGACGGATTTACAGATTCGCTTTGATATTTGAGTTGCCAGCTTTTTATACAAAAT 57 8190604 0.83097122 21 56 525 1 1.806179974 0.21875 0.122807018 0.21875 57 0 0 64 3L:8190568-8190696 6 Atg18a FBtr0346547|FBtr0076691|FBtr0321319|FBtr0321320|FBtr0076692|FBtr0321321|FBtr0076693 8189976|8189976|8190267|8190267|8189976|8189976|8189976 8190714|8190714|8190714|8190965|8190714|8190714|8191118 ATGTGA 6mer3-8 dme-miR-1003-3p 3L + 8190558 8190633 3'utr Atg18a FlyBase G21716.1 TTTAAGCCTCCGTTCCTGGCGCTGCCATTGGAATGTGAAATGCTTTTGTCATACACTCCTAAGTTAGTTGTTAATT 35 8190603 0.935417665 10 35 287 1 1.748188027 0.232142857 0.428571429 0.642857143 35 0 0 56 3L:8190558-8190633 6 28 3307 FBgn0035850 441.6666667 25.08666667 38.37666667 0.063396226 1.116130747 0.729610006 -14 -13 -13.5 0.01 dme-miR-283-5p 8mer-m1 TGATATTT 3L 8190664 8190671 + 3L_8190664_8190671_+ 0.555593841 0.555593841 0.555593841 0 Atg18a FBtr0321321|FBtr0076693|FBtr0321320|FBtr0076692|FBtr0076691|FBtr0321319|FBtr0346547 8189976|8189976|8190267|8189976|8189976|8190267|8189976 8190714|8191118|8190965|8190714|8190714|8190714|8190714 3L + 8190568 8190696 3'utr Atg18a FlyBase G28679.1 CGTTCCTGGCGCTGCCATTGGAATGTGAAATGCTTTTGTCATACACTCCTAAGTTAGTTGTTAATTAATAATTTAGACGGATTTACAGATTCGCTTTGATATTTGAGTTGCCAGCTTTTTATACAAAAT 57 8190658 0.83097122 21 56 525 1 1.806179974 0.21875 0.122807018 0.21875 57 0 0 64 3L:8190568-8190696 8 Atg18a FBtr0346547|FBtr0076691|FBtr0321319|FBtr0321320|FBtr0076692|FBtr0321321|FBtr0076693 8189976|8189976|8190267|8190267|8189976|8189976|8189976 8190714|8190714|8190714|8190965|8190714|8190714|8191118 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 8190634 8190674 3'utr Atg18a FlyBase G21717.1 AATAATTTAGACGGATTTACAGATTCGCTTTGATATTTGAG 24 8190657 0.982836463 5 24 195 1 1.612783857 0.097560976 0.5 0.707317073 24 0 0 41 3L:8190634-8190674 8 23.5 3308 FBgn0035850 441.6666667 25.08666667 38.37666667 0.053207547 0.936752591 0.612351255 6 7 6.5 0.01 dme-miR-968-5p 6mer2-7 CTACTT 3L 8191053 8191058 + 3L_8191053_8191058_+ 0.993018803 0.981457561 0.987238182 0.008175003 Atg18a FBtr0076693 8189976 8191118 3L + 8191030 8191076 3'utr Atg18a FlyBase G28680.1 AGTTTACAAATGAAACTCATACGCTACTTTATTGTATTCAATAAATT 21 8191058 0.728716113 6 21 185 1 1.397940009 0 0.19047619 0.32 21 0 0 25 3L:8191030-8191076 6 Atg18a FBtr0076693 8189976 8191118 CTACTT 6mer2-7 dme-miR-968-5p 3L + 8191030 8191070 3'utr Atg18a FlyBase G21718.1 AGTTTACAAATGAAACTCATACGCTACTTTATTGTATTCAA 15 8191058 0.648308209 5 15 112 1 1.397940009 0.04 0.333333333 0.6 15 0 0 25 3L:8191030-8191070 6 17 3309 FBgn0035850 441.6666667 25.08666667 38.37666667 0.038490566 0.677650811 0.442977504 -5 -5 -5 0.01 dme-miR-34-5p 6mer3-8 CACTGC 3L 8196599 8196604 - 3L_8196599_8196604_- 1 1 1 0 UbcE2M FBtr0332139|FBtr0076722|FBtr0332138 8195845|8196531|8196531 8196739|8196739|8196739 3L - 8196580 8196648 3'utr UbcE2M FlyBase G35302.1 AACATCGGCGACAACAAATTATTGTAATAAACGAAAACAAAATCCACTGCGTGCAAAGAAGAAGCCGAG 9 8196601 0.820733226 3 9 20 1 1.079181246 0 0.222222222 0.416666667 9 0 0 12 3L:8196580-8196648 6 UbcE2M FBtr0332138|FBtr0332139|FBtr0076722 8196531|8195845|8196531 8196739|8196739|8196739 CACTGC 6mer3-8 dme-miR-34-5p 3L - 8196588 8196630 3'utr UbcE2M FlyBase G26709.1 TTATTGTAATAAACGAAAACAAAATCCACTGCGTGCAAAGAAG 10 8196601 0.768665859 3 9 32 0.9375 1.176091259 0 0.4 0.625 10 1 0 15 3L:8196588-8196630 6 7.5 3310 FBgn0035853 344.1466667 39.61666667 60.33 0.021793034 0.189314262 0.124316261 -3 -3 -3 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 8209811 8209816 - 3L_8209811_8209816_- 1 1 1 0 CG32364 FBtr0076720 8209575 8209857 3L - 8209742 8209821 3'utr CG32364 FlyBase G35307.1 ATGCTACCAAATCCATAAGGCTCCAAATGTTTTGTTTGTACTACACGTAAGTAGGACGAAAATGTATAAAATACTTTAAT 49 8209806 0.981177077 3 48 349 0.980392157 1.397940009 0.196078431 0.040816327 0.078431373 49 0 1 50 3L:8209742-8209821 6 CG32364 FBtr0076720 8209575 8209857 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 8209763 8209821 3'utr CG32364 FlyBase G26715.1 ATGCTACCAAATCCATAAGGCTCCAAATGTTTTGTTTGTACTACACGTAAGTAGGACGA 36 8209806 0.91584719 4 36 229 1 1.716003344 0.288461538 0.333333333 0.538461538 36 0 0 52 3L:8209763-8209821 6 22 3311 FBgn0052364 198.0266667 23.50666667 35.89333333 0.111096149 0.935904708 0.612927192 -10 -10 -10 0.01 dme-miR-34-5p 6mer2-7 ACTGCC 3L 826829 826834 - 3L_826829_826834_- 1 1 1 0 CG13900 FBtr0331404|FBtr0072597 826718|826718 830720|827877 3L - 826717 826874 3'utr CG13900 FlyBase G33124.1 ATACTAACTGCACATTAAATCACCGATCAACCACTAATCGACTGCCGCATATTTAAACTAGCATATAAGTCAGTGCAAACTCGACAAATTGCACAACCTAAATATAAACCCCTAATCATAAGCAATTTTTAACTTAAATAAAAGTAACTGAAAACAAA 753 826837 0.772646782 25 721 3085 0.959954233 1.923761961 0.177345538 0.139442231 0.258581236 753 26 9 839 3L:826717-826874 6 CG13900 FBtr0072597|FBtr0331404 826718|826718 827877|830720 ACTGCC 6mer2-7 dme-miR-34-5p 3L - 826751 826872 3'utr CG13900 FlyBase G25063.1 ACTAACTGCACATTAAATCACCGATCAACCACTAATCGACTGCCGCATATTTAAACTAGCATATAAGTCAGTGCAAACTCGACAAATTGCACAACCTAAATATAAACCCCTAATCATAAGCA 388 826838 0.947575908 17 359 1522 0.928455285 1.853546121 0.22601626 0.412371134 0.629268293 388 37 7 571 3L:826751-826872 6 515 3312 FBgn0035162 4015.156667 113.57 173.3966667 0.128263986 4.534648235 2.970068629 3 4 3.5 0.01 dme-miR-307a-3p 6mer2-7 GTTGTG 3L 826976 826981 - 3L_826976_826981_- 1 1 1 0 CG13900 FBtr0331404|FBtr0072597 826718|826718 830720|827877 3L - 826950 827003 intron-3'utr CG13900 FlyBase G33125.1 AGATCTTCTTACGTTGGGGTATGTTGTGGCGCTTAATTCTAACTAAATTATACA 12 826979 0.988546395 7 12 114 1 1.113943352 0.230769231 0.083333333 0.153846154 12 0 0 13 3L:826950-827003 6 CG13900 FBtr0072597|FBtr0331404 826718|826718 827877|830720 GTTGTG 6mer2-7 dme-miR-307a-3p 3L - 826954 827003 intron-3'utr CG13900 FlyBase G25064.1 AGATCTTCTTACGTTGGGGTATGTTGTGGCGCTTAATTCTAACTAAATTA 11 826978 0.982079479 7 11 89 1 1.176091259 0.333333333 0.272727273 0.466666667 11 0 0 15 3L:826954-827003 6 11.5 3313 FBgn0035162 4015.156667 113.57 173.3966667 0.002864147 0.101259135 0.066321921 -2 -3 -2.5 0.01 dme-bantam-3p 6mer2-7 GATCTC 3L 827998 828003 - 3L_827998_828003_- 0.999998815 0.999997513 0.999998164 9.19E-07 CG13900 FBtr0331404 826718 830720 3L - 827976 828077 3'utr CG13900 FlyBase G33128.1 ATCCTCCACTCTGTGGACGCGACCATCTCAGCTACAGGAGCTCGTATTATCCGGTCAAAAACGTACTCGACGGCGATCTCTGCGAGCAGTATCTGTCCATTG 232 827997 0.855529877 11 230 843 0.993079585 2.457881897 0.141868512 0.215517241 0.370242215 232 2 0 287 3L:827976-828077 6 CG13900 FBtr0331404 826718 830720 GATCTC 6mer2-7 dme-bantam-3p 3L - 827979 828081 3'utr CG13900 FlyBase G25065.1 GAGAATCCTCCACTCTGTGGACGCGACCATCTCAGCTACAGGAGCTCGTATTATCCGGTCAAAAACGTACTCGACGGCGATCTCTGCGAGCAGTATCTGTCCA 163 827997 0.860141474 11 161 600 0.988095238 2.095169351 0.154761905 0.380368098 0.599206349 163 2 1 249 3L:827979-828081 6 181.5 3314 FBgn0035162 4015.156667 113.57 173.3966667 0.045203716 1.59813331 1.046732925 -6 -6 -6 0.01 dme-miR-33-5p 7mer-A1 AATGCAA 3L 8282717 8282723 - 3L_8282717_8282723_- 0.782911824 0.782911824 0.782911824 0 cert FBtr0345035|FBtr0332136|FBtr0076717 8282526|8282526|8282526 8283085|8283085|8283085 3L - 8282654 8282798 3'utr cert FlyBase G35311.1 TGAAACACAATCATTGTATAGATCTTAGTTCCAAAACTTTCTATCTGTAGTGTATATCTTTATGGAAATGCTTTAAATGCAACAATTGCAAGAATGATGTGAGGGATGCATAGCTACATATACGAAAGCTTTTCTTTTGGTGTGA 29 8282730 0.980490007 12 29 211 1 1.531478917 0.117647059 0.172413793 0.294117647 29 0 0 34 3L:8282654-8282798 7 cert FBtr0345035|FBtr0332136|FBtr0076717 8282526|8282526|8282526 8283085|8283085|8283085 AATGCAA 7mer-A1 dme-miR-33-5p 3L - 8282703 8282750 3'utr cert FlyBase G26720.1 AGTGTATATCTTTATGGAAATGCTTTAAATGCAACAATTGCAAGAATG 7 8282722 0.991769521 4 5 56 0.888888889 0.903089987 0.111111111 0.285714286 0.444444444 7 1 0 8 3L:8282703-8282750 7 10 3315 FBgn0027569 860.3466667 42.59 65.35666667 0.011623222 0.234796901 0.153006579 7 -1 3 0.01 dme-miR-8-3p 7mer-m8 CAGTATT 3L 828503 828509 - 3L_828503_828509_- 0.661615243 0.661615243 0.661615243 0 CG13900 FBtr0331404 826718 830720 3L - 828441 828590 3'utr CG13900 FlyBase G33133.1 GCGAGAACAAGCACATTCCCTATCAGATTGTCAATATCCAAGCCATGGGTCATCGTGTTTACGTGTCGGATGTTCAGGAATCAGTATTTTTCATACGCTATCGTCGCGCGGAGAACCAGCTGATTATATTTGCCGATGACACGCATCCTC 86 828510 0.986014438 16 77 648 0.897959184 1.643452676 0.204081633 0.127906977 0.234693878 86 9 1 88 3L:828441-828590 7 CG13900 FBtr0331404 826718 830720 CAGTATT 7mer-m8 dme-miR-8-3p 3L - 828474 828617 3'utr CG13900 FlyBase G25066.2 TCGGCAAGAAGAAAATGCTGCGCAAATGCGAGAACAAGCACATTCCCTATCAGATTGTCAATATCCAAGCCATGGGTCATCGTGTTTACGTGTCGGATGTTCAGGAATCAGTATTTTTCATACGCTATCGTCGCGCGGAGAACC 48 828510 0.983336756 13 43 335 0.926470588 1.498310554 0.191176471 0.291666667 0.5 48 4 1 63 3L:828474-828617 7 19 3316 FBgn0035162 4015.156667 113.57 173.3966667 0.004732069 0.167297702 0.109575347 1 1 1 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 3L 828817 828822 - 3L_828817_828822_- 1 1 1 0 CG13900 FBtr0331404 826718 830720 3L - 828807 828866 3'utr CG13900 FlyBase G33135.1 CGATGGCCATGCTGAAGTTCTCCATAGCGGCTGATGGCCGGTACTACCTGGCCGTGGGAA 13 828842 0.755833562 4 13 68 1 1.176091259 0.2 0.153846154 0.266666667 13 0 0 15 3L:828807-828866 6 CG13900 FBtr0331404 826718 830720 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 3L - 828806 828869 3'utr CG13900 FlyBase G25068.1 TGTCGATGGCCATGCTGAAGTTCTCCATAGCGGCTGATGGCCGGTACTACCTGGCCGTGGGAAT 11 828842 0.991478842 4 11 53 1 1.146128036 0.285714286 0.272727273 0.428571429 11 0 0 14 3L:828806-828869 6 5 3317 FBgn0035162 4015.156667 113.57 173.3966667 0.001245281 0.044025711 0.028835618 20 20 20 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 8298258 8298263 + 3L_8298258_8298263_+ 1 1 1 0 Rab19 FBtr0076705|FBtr0076705|FBtr0076705|FBtr0331832|FBtr0331832|FBtr0331832 8298223|8298223|8298223|8298223|8298223|8298223 8298506|8298506|8298506|8298506|8298506|8298506 3L + 8298192 8298309 stop_codon Rab19 FlyBase G28696.1 AAGAGTTGCAGCAGCTCATGCAATCTCACCTAGACCTAAATCCGCTCTTTAGTTTGCTTTTACTTTTGTGATCAAATTGTTCTTGTGGCTATATATTAGTATTCTAATGCTTTAACCT 91 8298256 0.960949404 17 82 1009 0.901960784 1.361727836 0.156862745 0.10989011 0.205882353 91 7 3 92 3L:8298192-8298309 6 Rab19 FBtr0331832|FBtr0331832|FBtr0331832|FBtr0076705|FBtr0076705|FBtr0076705 8298223|8298223|8298223|8298223|8298223|8298223 8298506|8298506|8298506|8298506|8298506|8298506 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 8298234 8298301 3'utr Rab19 FlyBase G21730.1 CGCTCTTTAGTTTGCTTTTACTTTTGTGATCAAATTGTTCTTGTGGCTATATATTAGTATTCTAATGC 69 8298256 0.714657309 12 68 762 0.989795918 1.685741739 0.183673469 0.31884058 0.520408163 69 0 1 97 3L:8298234-8298301 6 63.5 3318 FBgn0015793 126.0033333 15.34 23.52333333 0.503954922 4.139504563 2.699447357 2 2 2 0.01 dme-miR-13b-2-5p 8mer-A1 TTTGACGA 3L 8298349 8298356 + 3L_8298349_8298356_+ 0.601218565 0.601218565 0.601218565 0 Rab19 FBtr0076705|FBtr0331832 8298223|8298223 8298506|8298506 3L + 8298342 8298375 3'utr Rab19 FlyBase G28697.1 ATTTATTTTTGACGATAGAGTACAAACAATCTCA 5 8298356 0.777445187 3 5 28 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 3L:8298342-8298375 8 Rab19 FBtr0331832|FBtr0076705 8298223|8298223 8298506|8298506 TTTGACGA 8mer-A1 dme-miR-13b-2-5p 3L + 8298315 8298379 3'utr Rab19 FlyBase G21731.1 TAGACACTAACTTTTACACAACCATGTATTTATTTTTGACGATAGAGTACAAACAATCTCACACA 7 8298351 0.98568958 6 6 56 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 3L:8298315-8298379 8 5 3319 FBgn0015793 126.0033333 15.34 23.52333333 0.03968149 0.325945241 0.21255491 -7 -2 -4.5 0.01 dme-miR-305-3p 7mer-m1 TGTGCCG 3L 830216 830222 - 3L_830216_830222_- 0.825582373 0.825582373 0.825582373 0 CG13900 FBtr0331404 826718 830720 3L - 830192 830237 3'utr CG13900 FlyBase G33141.1 ACGCCCACGCTCTGTTGTGCCGCCCTGGGCGATGATGCGCTGGTTC 10 830222 0.836153189 4 10 58 1 1.176091259 0 0.4 0.6 10 0 0 15 3L:830192-830237 7 CG13900 FBtr0331404 826718 830720 TGTGCCG 7mer-m1 dme-miR-305-3p 3L - 830192 830233 3'utr CG13900 FlyBase G25072.1 CCACGCTCTGTTGTGCCGCCCTGGGCGATGATGCGCTGGTTC 5 830212 0.944903561 2 5 28 1 0.954242509 0.555555556 0.4 0.666666667 5 0 0 9 3L:830192-830233 7 7.5 3320 FBgn0035162 4015.156667 113.57 173.3966667 0.001867922 0.066038567 0.043253427 0 -10 -5 0.01 dme-miR-283-5p 8mer-m1 TGATATTT 3L 8302254 8302261 + 3L_8302254_8302261_+ 0.555593841 0.555593841 0.555593841 0 CG13671 FBtr0076706 8302211 8302341 3L + 8302238 8302288 3'utr CG13671 FlyBase G28703.1 AGTTAAAAGTTACCGTTGATATTTCCTGTAGATCGTAAGGCTAAAGTTGTC 28 8302254 0.751566411 7 26 251 0.914285714 1.505149978 0.314285714 0.25 0.4 28 3 0 32 3L:8302238-8302288 8 CG13671 FBtr0076706 8302211 8302341 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 8302238 8302286 3'utr CG13671 FlyBase G21734.1 AGTTAAAAGTTACCGTTGATATTTCCTGTAGATCGTAAGGCTAAAGTTG 16 8302258 0.669530582 7 12 124 0.75862069 1.041392685 0.137931034 0.6875 0.827586207 16 6 1 22 3L:8302238-8302286 8 17.5 3321 FBgn0035867 449.54 23.89 36.41666667 0.038928683 0.732524069 0.480549199 0 -4 -2 0.01 dme-miR-980-5p 6mer2-7 AAAAAC 3L 8356465 8356470 - 3L_8356465_8356470_- 1 1 1 0 Idh FBtr0076668|FBtr0076673|FBtr0114548|FBtr0076671|FBtr0114549|FBtr0076667|FBtr0333058|FBtr0076670|FBtr0076669 8356402|8356402|8356402|8356402|8356402|8356402|8356402|8356402|8356402 8356654|8356654|8356654|8356654|8356654|8356654|8356654|8356654|8356654 3L - 8356437 8356495 3'utr Idh FlyBase G35356.1 TTCATTGTCTCTGCGAGACGCAAAAAAAAACCCTGATTTCCCTTTAACGTCTAACGGAA 15 8356458 0.770022334 5 15 96 1 1.176091259 0.066666667 0 0 15 0 0 15 3L:8356437-8356495 6 Idh FBtr0333058|FBtr0076670|FBtr0076669|FBtr0114549|FBtr0076667|FBtr0114548|FBtr0076671|FBtr0076668|FBtr0076673 8356402|8356402|8356402|8356402|8356402|8356402|8356402|8356402|8356402 8356654|8356654|8356654|8356654|8356654|8356654|8356654|8356654|8356654 AAAAAC 6mer2-7 dme-miR-980-5p 3L - 8356419 8356542 3'utr Idh FlyBase G26753.1 ATGTCCTAGGCTAAAAATCCGTGTCCTCGATGCATGTTTCCCACTGTTTCATTGTCTCTGCGAGACGCAAAAAAAAACCCTGATTTCCCTTTAACGTCTAACGGAAAAGAAATTTCAAATAAAT 14 8356458 0.980967742 9 13 93 1 1.322219295 0 0.285714286 0.523809524 14 0 0 21 3L:8356419-8356542 6 8 3322 FBgn0001248 1673.826667 115.14 175.1066667 0.004779467 0.069480632 0.045686439 -12 -12 -12 0.01 dme-miR-33-5p 6mer2-7 AATGCA 3L 836607 836612 + 3L_836607_836612_+ 0.873184682 0.999290217 0.936237449 0.089170054 CG42554 FBtr0301253 836552 836770 3L + 836579 836651 3'utr CG42554 FlyBase G26909.1 CTTCAACTAATTTGAAAGATCTCGTGGTAATGCAGTGCCCGCTGAGTGGTGATTAGGATTTAATTTTAGGCAC 45 836603 0.639228599 14 41 322 0.890909091 0.991226076 0.254545455 0.222222222 0.363636364 45 2 4 49 3L:836579-836651 6 CG42554 FBtr0301253 836552 836770 AATGCA 6mer2-7 dme-miR-33-5p 3L + 836572 836644 3'utr CG42554 FlyBase G20367.1 TGTAAAACTTCAACTAATTTGAAAGATCTCGTGGTAATGCAGTGCCCGCTGAGTGGTGATTAGGATTTAATTT 34 836603 0.856427737 13 33 242 0.980392157 1.698970004 0.156862745 0.382352941 0.588235294 34 1 0 50 3L:836572-836644 6 24 3323 FBgn0260756 37.16 4.52 6.893333333 0.645855759 5.309734513 3.481624758 4 4 4 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3L 839469 839474 + 3L_839469_839474_+ 1 1 1 0 CG13887 FBtr0304797|FBtr0072584|FBtr0345588|FBtr0072583 839152|839431|839431|839431 839747|839747|839931|839747 3L + 839446 839513 3'utr CG13887 FlyBase G26916.1 AAGTCCAACATTTAAATAACGATAAGACTTATAAGCATGGCGGTGGGGCAGCGAAAGCAGGCACATTT 389 839482 0.809432961 8 330 1595 0.844444444 2.102662342 0.433333333 0.143958869 0.26 389 68 2 380 3L:839446-839513 6 CG13887 FBtr0072583|FBtr0345588|FBtr0072584|FBtr0304797 839431|839431|839431|839152 839747|839931|839747|839747 AAGACT 6mer3-8 dme-miR-14-3p 3L + 839369 839515 stop_codon CG13887 FlyBase G20372.1 CGAGGAGTACAGCAAGCTGCAGAAGAAGATAACCATCGGCGGAGGCGGAAACAAGGATGATTAAACTCACTGGAGCCAAGTCCAACATTTAAATAACGATAAGACTTATAAGCATGGCGGTGGGGCAGCGAAAGCAGGCACATTTAA 320 839482 0.965389827 15 235 1239 0.738947368 2.068185862 0.412631579 0.35625 0.566315789 320 122 2 351 3L:839369-839515 6 267 3324 FBgn0035165 3558.06 375.0733333 574.87 0.075040893 0.711860792 0.464452833 -13 -13 -13 0.01 dme-bantam-3p 7mer-m8 TGATCTC 3L 840010 840016 - 3L_840010_840016_- 0.661615243 0.661615243 0.661615243 0 CG13902 FBtr0331402|FBtr0300712 839978|839978 840057|840057 3L - 839995 840028 3'utr CG13902 FlyBase G33156.1 ATTTATGTAGGATGATCTCTGTTCAAGTTAAGAT 13 840016 0.746872939 3 13 104 1 1.176091259 0.066666667 0.153846154 0.266666667 13 0 0 15 3L:839995-840028 7 CG13902 FBtr0300712|FBtr0331402 839978|839978 840057|840057 TGATCTC 7mer-m8 dme-bantam-3p 3L - 839990 840024 3'utr CG13902 FlyBase G25084.1 ATGTAGGATGATCTCTGTTCAAGTTAAGATTAAAG 6 840016 0.981906274 3 6 41 1 1 0 0.333333333 0.6 6 0 0 10 3L:839990-840024 7 9 3325 FBgn0035166 125.3433333 11.64666667 17.69 0.071802782 0.772753291 0.508762012 0 0 0 0.01 dme-miR-184-3p 8mer-A1 TCCGTCCA 3L 8407329 8407336 - 3L_8407329_8407336_- 0.631136385 0.631136385 0.631136385 0 Oseg1 FBtr0345038|FBtr0076663 8407266|8407266 8407370|8407370 3L - 8407307 8407360 3'utr Oseg1 FlyBase G35375.1 AGAAGTGTGTGCAAATATATAATTTCCGTCCAAAACTGTACAAATAGGAACTAT 123 8407337 0.721228656 3 123 872 1 2.167317335 0.040816327 0.146341463 0.285714286 123 0 0 147 3L:8407307-8407360 8 Oseg1 FBtr0076663|FBtr0345038 8407266|8407266 8407370|8407370 TCCGTCCA 8mer-A1 dme-miR-184-3p 3L - 8407305 8407358 3'utr Oseg1 FlyBase G26767.1 AAGTGTGTGCAAATATATAATTTCCGTCCAAAACTGTACAAATAGGAACTATAC 99 8407337 0.701736893 5 96 665 0.964788732 2.136720567 0.070422535 0.333333333 0.535211268 99 5 0 137 3L:8407305-8407358 8 111 3326 FBgn0265102 118.8066667 3.826666667 5.82 0.934291005 29.00696864 19.07216495 1 1 1 0.01 dme-miR-970-3p 8mer-A1 TCTTATGA 3L 8427483 8427490 + 3L_8427483_8427490_+ 0.630786564 0.630790216 0.63078839 2.55E-06 Cbl FBtr0076614 8427408 8428655 3L + 8427401 8427581 lincRNA_exon-lincRNA_intron Cbl FlyBase G28745.1 GAGGTATAGTTTTGTTCACAGCCTGATCAGCCTGATCCGCCTGCTCCGCTGCCGCCTGTGCTGCTATTTATATACATATTACTCTTATGATTACCTTTGGTTCGTTTATACAGTTATATATGCCTATATATACATTATATATTTTAGATTTTACAACTGCTATTGTTTATATAAGTTTAAT 61 8427491 0.987756108 26 59 536 0.971014493 1.348953548 0.15942029 0.098360656 0.202898551 61 0 2 67 3L:8427401-8427581 8 Cbl FBtr0076614 8427408 8428655 TCTTATGA 8mer-A1 dme-miR-970-3p 3L + 8427406 8427504 stop_codon Cbl FlyBase G21771.1 ATAGTTTTGTTCACAGCCTGATCAGCCTGATCCGCCTGCTCCGCTGCCGCCTGTGCTGCTATTTATATACATATTACTCTTATGATTACCTTTGGTTCG 35 8427497 0.989904453 16 31 305 0.884615385 1.185636577 0.096153846 0.342857143 0.557692308 35 4 2 46 3L:8427406-8427504 8 21.5 3327 FBgn0020224 1487.473333 60.45 92.97666667 0.014454041 0.35566584 0.231240813 -8 -14 -11 0.01 dme-miR-1006-3p 7mer-A1 GAATTTA 3L 8427989 8427995 + 3L_8427989_8427995_+ 0.69984865 0.69984865 0.69984865 0 Cbl FBtr0076614 8427408 8428655 3L + 8427971 8428044 3'utr Cbl FlyBase G28747.1 TTGTACATAGGCACTATGGAATTTATAATTGTAACCTGTTCTGTATTATTCGTTGAATTTTCTCTTTCACATCC 9 8427987 0.984746636 5 7 76 0.888888889 0.903089987 0.222222222 0 0 9 1 0 8 3L:8427971-8428044 7 Cbl FBtr0076614 8427408 8428655 GAATTTA 7mer-A1 dme-miR-1006-3p 3L + 8427976 8428023 3'utr Cbl FlyBase G21772.1 CATAGGCACTATGGAATTTATAATTGTAACCTGTTCTGTATTATTCGT 7 8427987 0.87987295 4 7 67 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 3L:8427976-8428023 7 4 3328 FBgn0020224 1487.473333 60.45 92.97666667 0.002689124 0.066170389 0.043021547 2 2 2 0.01 dme-miR-190-5p 7mer-A1 CATATCA 3L 8428214 8428220 + 3L_8428214_8428220_+ 0.782911824 0.782911824 0.782911824 0 Cbl FBtr0076614 8427408 8428655 3L + 8428149 8428221 3'utr Cbl FlyBase G28748.1 TTAGTTTATTGTTTAATACTTCCAAAGATACATTTAGTTTGTAGTAGCGTGCGTTTACTTCCCCCCATATCAA 126 8428207 0.824637416 11 123 1014 0.97810219 2.127104798 0.051094891 0.087301587 0.160583942 126 3 0 134 3L:8428149-8428221 7 Cbl FBtr0076614 8427408 8428655 CATATCA 7mer-A1 dme-miR-190-5p 3L + 8428147 8428220 3'utr Cbl FlyBase G21773.1 TTTTAGTTTATTGTTTAATACTTCCAAAGATACATTTAGTTTGTAGTAGCGTGCGTTTACTTCCCCCCATATCA 130 8428207 0.816479966 12 123 1042 0.943877551 2.267171728 0.06122449 0.361538462 0.576530612 130 11 0 185 3L:8428147-8428220 7 95.5 3329 FBgn0020224 1487.473333 60.45 92.97666667 0.064202832 1.579818031 1.027139426 7 7 7 0.01 dme-miR-14-3p 7mer-m8 AAGACTG 3L 8428258 8428264 + 3L_8428258_8428264_+ 0.671795832 0.671795832 0.671795832 0 Cbl FBtr0076614 8427408 8428655 3L + 8428231 8428285 3'utr Cbl FlyBase G28749.1 ATTTGTAAGCAGCCAACGCGCTGCCCTAAGACTGTAATTTATTATTAACAAAAAA 68 8428257 0.800300049 9 55 480 0.805194805 0.83814918 0 0.132352941 0.233766234 68 7 8 62 3L:8428231-8428285 7 Cbl FBtr0076614 8427408 8428655 AAGACTG 7mer-m8 dme-miR-14-3p 3L + 8428234 8428287 3'utr Cbl FlyBase G21774.1 TGTAAGCAGCCAACGCGCTGCCCTAAGACTGTAATTTATTATTAACAAAAAAAA 48 8428257 0.76662485 10 40 309 0.824324324 1.183269844 0 0.333333333 0.567567568 48 10 3 61 3L:8428234-8428287 7 56 3330 FBgn0020224 1487.473333 60.45 92.97666667 0.037647734 0.926385443 0.602301653 1 1 1 0.01 dme-miR-184-5p 6mer3-8 TGATAA 3L 8432784 8432789 - 3L_8432784_8432789_- 1 1 1 0 Unr FBtr0345595|FBtr0308954 8432320|8432320 8434468|8434468 3L - 8432748 8432803 3'utr Unr FlyBase G35382.1 CGAGGTTGATGGAATGATAATGGGATAATCGACAGACATGCCAAACGCCATCGCCT 7 8432797 0.959774829 5 7 32 1 1 0.2 0.285714286 0.5 7 0 0 10 3L:8432748-8432803 6 Unr FBtr0308954|FBtr0345595 8432320|8432320 8434468|8434468 TGATAA 6mer3-8 dme-miR-184-5p 3L - 8432778 8432811 3'utr Unr FlyBase G26772.1 GGGCAAATCGAGGTTGATGGAATGATAATGGGAT 11 8432797 0.634387209 5 9 56 0.928571429 1.113943352 0.214285714 0.272727273 0.428571429 11 1 0 13 3L:8432778-8432811 6 8 3331 FBgn0263352 12905.48667 184.7766667 285.27 0.000619891 0.04329551 0.028043608 8 8 8 0.01 dme-bantam-3p 6mer3-8 TGATCT 3L 8433535 8433540 - 3L_8433535_8433540_- 1 1 1 0 Unr FBtr0345595|FBtr0308954|FBtr0332984|FBtr0114592 8432320|8432320|8433230|8433230 8434468|8434468|8434468|8434468 3L - 8433517 8433554 3'utr Unr FlyBase G35387.1 TATTTCCCATGATTTGATCTTCGCTTGTATAAACACGT 30 8433540 0.688667363 6 26 290 0.897435897 1.243038049 0.128205128 0.2 0.384615385 30 3 1 35 3L:8433517-8433554 6 Unr FBtr0114592|FBtr0308954|FBtr0332984|FBtr0345595 8433230|8432320|8433230|8432320 8434468|8434468|8434468|8434468 TGATCT 6mer3-8 dme-bantam-3p 3L - 8433505 8433556 3'utr Unr FlyBase G26776.1 ATTATTTCCCATGATTTGATCTTCGCTTGTATAAACACGTCAAGTGGTTTTG 20 8433541 0.783196371 11 20 206 1 1.491361694 0.096774194 0.4 0.612903226 20 0 0 31 3L:8433505-8433556 6 23 3332 FBgn0263352 12905.48667 184.7766667 285.27 0.001782188 0.124474591 0.080625372 0 1 0.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 3L 8433800 8433805 - 3L_8433800_8433805_- 0.783417206 1 0.891708603 0.153147167 Unr FBtr0345595|FBtr0308954|FBtr0332984|FBtr0114592 8432320|8432320|8433230|8433230 8434468|8434468|8434468|8434468 3L - 8433791 8433846 3'utr Unr FlyBase G35389.1 ATTTATCTATGGCTGGCATAGTTCCTGCTTCTATTGTATCTTGATCTACTCGTATT 8 8433827 0.74579482 7 7 91 0.9 0.653212514 0.3 0.25 0.4 8 0 1 9 3L:8433791-8433846 6 Unr FBtr0114592|FBtr0308954|FBtr0332984|FBtr0345595 8433230|8432320|8433230|8432320 8434468|8434468|8434468|8434468 TGATCT 6mer3-8 dme-bantam-3p 3L - 8433791 8433834 3'utr Unr FlyBase G26779.1 CTGGCATAGTTCCTGCTTCTATTGTATCTTGATCTACTCGTATT 7 8433806 0.913247696 3 4 70 0.75 0.77815125 0.25 0.142857143 0.25 7 2 0 6 3L:8433791-8433834 6 5 3333 FBgn0263352 12905.48667 184.7766667 285.27 0.000387432 0.027059694 0.017527255 22 1 11.5 0.01 dme-miR-184-5p 6mer2-7 GATAAG 3L 8433968 8433973 - 3L_8433968_8433973_- 1 1 1 0 Unr FBtr0345595|FBtr0308954|FBtr0332984|FBtr0114592 8432320|8432320|8433230|8433230 8434468|8434468|8434468|8434468 3L - 8433956 8433985 3'utr Unr FlyBase G35391.1 AAAACCGATTGGGATAAGTGATGAGAGCAA 8 8433977 0.851583007 2 4 29 0.666666667 0.77815125 0.111111111 0.125 0.222222222 8 3 0 6 3L:8433956-8433985 6 Unr FBtr0114592|FBtr0308954|FBtr0332984|FBtr0345595 8433230|8432320|8433230|8432320 8434468|8434468|8434468|8434468 GATAAG 6mer2-7 dme-miR-184-5p 3L - 8433944 8433990 3'utr Unr FlyBase G26781.1 AATTAAAAACCGATTGGGATAAGTGATGAGAGCAAGGAAACGAGCAA 12 8433977 0.95559408 3 10 42 0.833333333 0.875061263 0 0.5 0.666666667 12 2 1 15 3L:8433944-8433990 6 9.5 3334 FBgn0263352 12905.48667 184.7766667 285.27 0.000736121 0.051413418 0.033301784 4 4 4 0.01 dme-miR-317-3p 8mer-A1 TGTGTTCA 3L 8470858 8470865 + 3L_8470858_8470865_+ 0.631136746 0.631136783 0.631136764 7.07E-08 Gug FBtr0305699|FBtr0076618|FBtr0305696|FBtr0305697|FBtr0305698|FBtr0076616|FBtr0333048|FBtr0076619 8470769|8470769|8470769|8470769|8470769|8470769|8470769|8470769 8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669 3L + 8470756 8470887 stop_codon Gug FlyBase G28769.1 CAACGGCCCAGATAAGTGGACAGACAGCAATTGTAGAGAGCAAGCAACTGAACAAAGACAATACTCGGGCCGCGGCCGTGAGGAACTGCTTTGTGTGATTTTTGTGTTCAAGCGTTTACATTTTGTTTTCCA 92 8470857 0.974565337 18 86 533 0.930434783 2.029383778 0.32173913 0.195652174 0.356521739 92 8 0 107 3L:8470756-8470887 8 Gug FBtr0076619|FBtr0076616|FBtr0333048|FBtr0305697|FBtr0305698|FBtr0305699|FBtr0076618|FBtr0305696 8470769|8470769|8470769|8470769|8470769|8470769|8470769|8470769 8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669 TGTGTTCA 8mer-A1 dme-miR-317-3p 3L + 8470784 8470875 3'utr Gug FlyBase G21793.1 AATTGTAGAGAGCAAGCAACTGAACAAAGACAATACTCGGGCCGCGGCCGTGAGGAACTGCTTTGTGTGATTTTTGTGTTCAAGCGTTTACA 45 8470857 0.962856331 9 40 254 0.873239437 1.792391689 0.169014085 0.444444444 0.647887324 45 9 0 62 3L:8470784-8470875 8 28 3335 FBgn0010825 1916.706667 26.53 40.64 0.014608391 1.055408971 0.688976378 1 1 1 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 3L 8471665 8471671 + 3L_8471665_8471671_+ 0.782911824 0.782911824 0.782911824 0 Gug FBtr0305699|FBtr0076618|FBtr0305696|FBtr0305697|FBtr0305698|FBtr0076616|FBtr0333048|FBtr0333049|FBtr0076619 8470769|8470769|8470769|8470769|8470769|8470769|8470769|8471166|8470769 8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669 3L + 8471642 8471690 3'utr Gug FlyBase G28772.1 TCATATATATATTCGAGAGTATTGTACAAATGGATTCGGAGATAGTTTT 48 8471663 0.720444816 8 45 337 0.943396226 1.698970004 0.301886792 0.083333333 0.169811321 48 3 0 50 3L:8471642-8471690 7 Gug FBtr0333049|FBtr0076619|FBtr0076616|FBtr0333048|FBtr0305697|FBtr0305698|FBtr0305699|FBtr0076618|FBtr0305696 8471166|8470769|8470769|8470769|8470769|8470769|8470769|8470769|8470769 8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669 GTACAAA 7mer-A1 dme-miR-305-5p 3L + 8471644 8471691 3'utr Gug FlyBase G21796.1 ATATATATATTCGAGAGTATTGTACAAATGGATTCGGAGATAGTTTTC 31 8471663 0.693939081 6 30 191 0.97826087 1.653212514 0.239130435 0.387096774 0.586956522 31 1 0 45 3L:8471644-8471691 7 38.5 3336 FBgn0010825 1916.706667 26.53 40.64 0.020086537 1.451187335 0.94734252 2 2 2 0.01 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 8472537 8472543 + 3L_8472537_8472543_+ 0.822906072 0.820552552 0.821729312 0.001664176 Gug FBtr0305699|FBtr0076618|FBtr0305696|FBtr0305697|FBtr0305698|FBtr0076616|FBtr0333048|FBtr0333049|FBtr0076619 8470769|8470769|8470769|8470769|8470769|8470769|8470769|8471166|8470769 8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669 3L + 8472514 8472603 3'utr Gug FlyBase G28780.1 ATACAAAAAAAAACAAAACAAATGCAGCTATATTATTGCAGCTATATTACTAAATAAATTATAAAACAAAAAGATCATACTGAAAAGATA 154 8472549 0.983698849 13 143 1111 0.935483871 2.240549248 0.02688172 0.142857143 0.290322581 154 12 0 174 3L:8472514-8472603 7 Gug FBtr0333049|FBtr0076619|FBtr0076616|FBtr0333048|FBtr0305697|FBtr0305698|FBtr0305699|FBtr0076618|FBtr0305696 8471166|8470769|8470769|8470769|8470769|8470769|8470769|8470769|8470769 8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669 GCAGCTA 7mer-A1 dme-miR-980-3p 3L + 8472502 8472606 3'utr Gug FlyBase G21800.1 ATTTATATATATATACAAAAAAAAACAAAACAAATGCAGCTATATTATTGCAGCTATATTACTAAATAAATTATAAAACAAAAAGATCATACTGAAAAGATAAAT 98 8472549 0.981530708 10 93 680 0.960264901 1.860338007 0.046357616 0.387755102 0.602649007 98 5 1 145 3L:8472502-8472606 7 108 3337 FBgn0010825 1916.706667 26.53 40.64 0.05634665 4.070863174 2.657480315 -12 -12 -12 0.01 dme-bantam-3p 6mer3-8 TGATCT 3L 8533492 8533497 + 3L_8533492_8533497_+ 0.999468057 0.999999986 0.999734021 0.00037611 foi FBtr0331417|FBtr0345601|FBtr0331418|FBtr0076624 8533104|8533104|8533104|8533104 8533984|8534503|8533984|8533984 3L + 8533470 8533636 3'utr foi FlyBase G28803.1 TGAAATTGGCTAGGTTATAAAGTGATCTTGAATTTAGATGAAAACATTTGAAAAGCATGCCGTGATGCTGTCAAATGAGAAAAGGAAGTAACAAAAAATGGATTGGATCTGGATCCCACAATCCTCTAATTACTGATCTTATACACGAAAGAGAACCTAAAAATTAC 122 8533496 0.978077291 20 120 989 0.972222222 2.146128036 0.25 0.147540984 0.277777778 122 4 0 140 3L:8533470-8533636 6 foi FBtr0331418|FBtr0076624|FBtr0331417|FBtr0345601 8533104|8533104|8533104|8533104 8533984|8533984|8533984|8534503 TGATCT 6mer3-8 dme-bantam-3p 3L + 8533422 8533545 3'utr foi FlyBase G21817.1 TGAACTGCGTTCGAATCCATTTCACACCCAATTTAATGTAAGATGTCTTGAAATTGGCTAGGTTATAAAGTGATCTTGAATTTAGATGAAAACATTTGAAAAGCATGCCGTGATGCTGTCAAAT 75 8533494 0.987547831 15 71 641 0.939655172 2.037426498 0.172413793 0.413333333 0.620689655 75 7 0 109 3L:8533422-8533545 6 74 3338 FBgn0024236 2703.683333 97.23 149.9066667 0.027370069 0.761081971 0.493640487 -4 -2 -3 0.01 dme-miR-190-5p 6mer3-8 ACATAT 3L 8533685 8533690 + 3L_8533685_8533690_+ 1 1 1 0 foi FBtr0331417|FBtr0345601|FBtr0331418|FBtr0076624 8533104|8533104|8533104|8533104 8533984|8534503|8533984|8533984 3L + 8533649 8533722 3'utr foi FlyBase G28804.1 ATAAATATACATATATATTGTAGGATATGTATACATACATATACTTTTTGTATTTTGTAGTCTAGAGTGCGCAC 11 8533712 0.988486727 8 11 105 1 1.041392685 0.272727273 0 0 11 0 0 11 3L:8533649-8533722 6 foi FBtr0331418|FBtr0076624|FBtr0331417|FBtr0345601 8533104|8533104|8533104|8533104 8533984|8533984|8533984|8534503 ACATAT 6mer3-8 dme-miR-190-5p 3L + 8533683 8533739 3'utr foi FlyBase G21819.1 ATACATATACTTTTTGTATTTTGTAGTCTAGAGTGCGCACGTTTACTTTATGCGAGT 14 8533703 0.991923041 6 12 138 0.909090909 1.301029996 0.363636364 0.357142857 0.590909091 14 2 0 20 3L:8533683-8533739 6 2 3339 FBgn0024236 2703.683333 97.23 149.9066667 0.000739732 0.020569783 0.013341635 -27 -18 -22.5 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 8533795 8533802 + 3L_8533795_8533802_+ 0.500120318 0.500120318 0.500120318 0 foi FBtr0331417|FBtr0345601|FBtr0331418|FBtr0076624 8533104|8533104|8533104|8533104 8533984|8534503|8533984|8533984 3L + 8533768 8533847 3'utr foi FlyBase G28805.1 TGTCCACCGCTGTTATGATTTTCTACAGTACTTAACGACTTGAACGCATATTTCCTCTTTCGGGAAATGTACACAAAACC 18 8533799 0.978441286 9 15 107 0.869565217 1.301029996 0.347826087 0.277777778 0.434782609 18 3 0 20 3L:8533768-8533847 8 foi FBtr0331418|FBtr0076624|FBtr0331417|FBtr0345601 8533104|8533104|8533104|8533104 8533984|8533984|8533984|8534503 GTACTTAA 8mer-A1 dme-miR-252-5p 3L + 8533772 8533836 3'utr foi FlyBase G21820.1 CACCGCTGTTATGATTTTCTACAGTACTTAACGACTTGAACGCATATTTCCTCTTTCGGGAAATG 15 8533799 0.975530423 6 15 96 1 1.342422681 0.272727273 0.333333333 0.545454545 15 0 0 22 3L:8533772-8533836 8 12.5 3340 FBgn0024236 2703.683333 97.23 149.9066667 0.004623323 0.128561144 0.083385217 -4 -4 -4 0.01 dme-miR-995-5p 6mer3-8 AATTCG 3L 8537122 8537127 + 3L_8537122_8537127_+ 1 1 1 0 ergic53 FBtr0301629|FBtr0076626 8537117|8537117 8537581|8538013 3L + 8537110 8537183 stop_codon ergic53 FlyBase G28811.1 TTCTATTAGGCGAATTCGCGACTTATTGGGATCGTAACGAATAACAAACACACAAGCATACACCCACAGAAATC 19 8537135 0.999924586 7 19 106 1 1.322219295 0.238095238 0.105263158 0.19047619 19 0 0 21 3L:8537110-8537183 6 ergic53 FBtr0076626|FBtr0301629 8537117|8537117 8538013|8537581 AATTCG 6mer3-8 dme-miR-995-5p 3L + 8537098 8537150 stop_codon ergic53 FlyBase G21825.1 CAGGCGAAAAAGTTCTATTAGGCGAATTCGCGACTTATTGGGATCGTAACGAA 11 8537135 0.96904707 4 11 61 1 1.255272505 0.5 0.363636364 0.611111111 11 0 0 18 3L:8537098-8537150 6 12 3341 FBgn0035909 3502.546667 181.83 278.43 0.003426079 0.06599571 0.043098804 -13 -13 -13 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3L 8537247 8537252 + 3L_8537247_8537252_+ 1 1 1 0 ergic53 FBtr0301629|FBtr0076626 8537117|8537117 8537581|8538013 3L + 8537194 8537274 3'utr ergic53 FlyBase G28812.1 AGATTCGCACACCTGACTAGGCAGCAACTAAATTTAGTTAAAATGAAAGATTTAAGACTTCAGCGTAGCATGCTCTACCAT 278 8537245 0.823812781 14 260 1773 0.938271605 2.181843588 0.330246914 0.143884892 0.265432099 278 19 1 304 3L:8537194-8537274 6 ergic53 FBtr0076626|FBtr0301629 8537117|8537117 8538013|8537581 AAGACT 6mer3-8 dme-miR-14-3p 3L + 8537184 8537275 3'utr ergic53 FlyBase G21826.1 ACGAGGAAACAGATTCGCACACCTGACTAGGCAGCAACTAAATTTAGTTAAAATGAAAGATTTAAGACTTCAGCGTAGCATGCTCTACCATT 131 8537245 0.980179067 12 118 829 0.900990099 1.481920138 0.262376238 0.381679389 0.599009901 131 15 5 182 3L:8537184-8537275 6 194 3342 FBgn0035909 3502.546667 181.83 278.43 0.05538827 1.06693065 0.696763998 2 2 2 0.01 dme-bantam-3p 7mer-m8 TGATCTC 3L 8564459 8564465 + 3L_8564459_8564465_+ 0.661615243 0.661615243 0.661615243 0 rhea FBtr0333109 8564005 8574409 3L + 8564441 8564486 3'utr rhea FlyBase G28835.1 TTTGTGCAGTGCCTTCAGTGATCTCCTCAAGGCAGCCGAGCCAGAA 53 8564459 0.977387238 5 50 331 0.942028986 1.335792102 0.057971014 0.283018868 0.449275362 53 2 2 65 3L:8564441-8564486 7 rhea FBtr0333109 8564005 8574409 TGATCTC 7mer-m8 dme-bantam-3p 3L + 8564443 8564485 3'utr rhea FlyBase G21840.1 TGTGCAGTGCCTTCAGTGATCTCCTCAAGGCAGCCGAGCCAGA 30 8564459 0.973834817 5 30 184 1 1.643452676 0.022727273 0.266666667 0.5 30 0 0 44 3L:8564443-8564485 7 41.5 3343 FBgn0260442 4425.776667 56.13 85.46 0.009376885 0.739355069 0.485607302 0 0 0 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT 3L 8564909 8564915 + 3L_8564909_8564915_+ 0.658999526 0.658999526 0.658999526 0 rhea FBtr0333109 8564005 8574409 3L + 8564882 8564936 3'utr rhea FlyBase G28837.1 TGATCCTAAGCTGAAGGCCGATCTCCTGGCAGCTGCTCGTGATGTGTCCAAGAGC 33 8564908 0.845735018 4 32 151 0.973684211 1.568201724 0.342105263 0.121212121 0.236842105 33 1 0 37 3L:8564882-8564936 7 rhea FBtr0333109 8564005 8574409 GGCAGCT 7mer-m8 dme-miR-980-3p 3L + 8564882 8564956 3'utr rhea FlyBase G21842.1 TGATCCTAAGCTGAAGGCCGATCTCCTGGCAGCTGCTCGTGATGTGTCCAAGAGCCTCACTGATATGTTGGAGCA 24 8564908 0.931830374 5 23 91 1 1.612783857 0.414634146 0.416666667 0.658536585 24 0 0 41 3L:8564882-8564956 7 27 3344 FBgn0260442 4425.776667 56.13 85.46 0.006100624 0.481026189 0.315937281 1 1 1 0.01 dme-miR-92b-3p 6mer2-7 TGCAAT 3L 8565329 8565334 + 3L_8565329_8565334_+ 1 1 1 0 rhea FBtr0333109 8564005 8574409 3L + 8565312 8565417 3'utr rhea FlyBase G28840.1 ACTGCGGCTAACACGCCTGCAATGAAACGTGGACTTATCCAGCGACTGGAATTCTGTTCGAAGCAAGCAGCCTCAGCAGCTACCCAGTGCATCTCGGCGGCCCAGA 39 8565341 0.9568493 7 39 183 1 1.643452676 0.272727273 0.128205128 0.227272727 39 0 0 44 3L:8565312-8565417 6 rhea FBtr0333109 8564005 8574409 TGCAAT 6mer2-7 dme-miR-92b-3p 3L + 8565320 8565363 3'utr rhea FlyBase G21843.1 TAACACGCCTGCAATGAAACGTGGACTTATCCAGCGACTGGAAT 20 8565341 0.917908176 4 19 89 0.961538462 1.397940009 0.269230769 0.3 0.461538462 20 1 0 25 3L:8565320-8565363 6 21 3345 FBgn0260442 4425.776667 56.13 85.46 0.00474493 0.37413148 0.245728996 -12 -12 -12 0.01 dme-miR-995-5p 6mer2-7 ATTCGG 3L 8565709 8565714 + 3L_8565709_8565714_+ 0.999999999 1 0.999999999 0 rhea FBtr0333109 8564005 8574409 3L + 8565712 8565751 3'utr rhea FlyBase G28843.1 CGGTAGCACAGCGTGCTCGTGATGCCTGTGGTGGTCAGGA 11 8565725 0.917963783 2 10 70 0.923076923 1.079181246 0.384615385 0.181818182 0.307692308 11 1 0 12 3L:8565712-8565751 2 rhea FBtr0333109 8564005 8574409 ATTCGG 6mer2-7 dme-miR-995-5p 3L + 8565712 8565783 3'utr rhea FlyBase G21846.1 CGGTAGCACAGCGTGCTCGTGATGCCTGTGGTGGTCAGGAACTGGAGTCAGCCCTAGAGGAGGTGCGCAAAC 10 8565725 0.957528377 4 9 43 1 1.301029996 0.1 0.7 0.85 10 0 0 20 3L:8565712-8565783 2 7 3346 FBgn0260442 4425.776667 56.13 85.46 0.001581643 0.124710493 0.081909665 -16 -16 -16 0.01 dme-miR-14-3p 6mer2-7 AGACTG 3L 8566049 8566054 + 3L_8566049_8566054_+ 0.999999999 1 0.999999999 0 rhea FBtr0333109 8564005 8574409 3L + 8566034 8566061 3'utr rhea FlyBase G28846.1 GAATCCAGCTATCATAGACTGTGCTGAT 14 8566048 0.739556424 3 11 78 0.866666667 1.113943352 0.066666667 0.071428571 0.133333333 14 2 0 13 3L:8566034-8566061 6 rhea FBtr0333109 8564005 8574409 AGACTG 6mer2-7 dme-miR-14-3p 3L + 8566035 8566063 3'utr rhea FlyBase G21847.1 AATCCAGCTATCATAGACTGTGCTGATGA 7 8566048 0.703734284 4 7 39 1 0.954242509 0.222222222 0.142857143 0.333333333 7 0 0 9 3L:8566035-8566063 6 10.5 3347 FBgn0260442 4425.776667 56.13 85.46 0.002372465 0.18706574 0.122864498 1 1 1 0.01 dme-miR-1007-3p 7mer-A1 GAGCTTA 3L 8567694 8567700 + 3L_8567694_8567700_+ 0.823349561 0.823349562 0.823349562 0 rhea FBtr0333109 8564005 8574409 3L + 8567667 8567706 3'utr rhea FlyBase G28853.1 AGTGGCCAGACGATGAACTCTGCTTCCGAGCTTATTGACA 6 8567701 0.815675635 5 5 43 0.833333333 0.698970004 0.166666667 0 0 6 1 0 5 3L:8567667-8567706 7 rhea FBtr0333109 8564005 8574409 GAGCTTA 7mer-A1 dme-miR-1007-3p 3L + 8567652 8567711 3'utr rhea FlyBase G21851.1 AACTTGCATGGATTCAGTGGCCAGACGATGAACTCTGCTTCCGAGCTTATTGACAAACTG 5 8567690 0.972506348 4 5 31 1 0.84509804 0.285714286 0.2 0.428571429 5 0 0 7 3L:8567652-8567711 7 4 3348 FBgn0260442 4425.776667 56.13 85.46 0.000903796 0.071263139 0.046805523 -7 4 -1.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 3L 8572052 8572057 + 3L_8572052_8572057_+ 0.999999999 1 0.999999999 0 rhea FBtr0333109 8564005 8574409 3L + 8572037 8572076 3'utr rhea FlyBase G28863.1 TGAAGTTTGACGAAATGATCTTGGAGGCTGCCAAGGGCAT 27 8572052 0.863490363 3 24 131 0.866666667 1.113943352 0.366666667 0.111111111 0.2 27 3 1 26 3L:8572037-8572076 6 rhea FBtr0333109 8564005 8574409 TGATCT 6mer3-8 dme-bantam-3p 3L + 8572036 8572077 3'utr rhea FlyBase G21858.1 ATGAAGTTTGACGAAATGATCTTGGAGGCTGCCAAGGGCATA 12 8572052 0.91152815 2 12 62 1 1.301029996 0.3 0.5 0.7 12 0 0 20 3L:8572036-8572077 6 18 3349 FBgn0260442 4425.776667 56.13 85.46 0.004067083 0.320684126 0.210624854 0 0 0 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 3L 8573832 8573837 + 3L_8573832_8573837_+ 1 1 1 0 rhea FBtr0333109|FBtr0333108|FBtr0333106|FBtr0333107|FBtr0333105|FBtr0305210 8564005|8573788|8573788|8573788|8573788|8573788 8574409|8574409|8574409|8574409|8574409|8574409 3L + 8573820 8573898 3'utr rhea FlyBase G28871.1 AAGTAAATGTTCTAGCTTGGTTCATGATTGCCAAAAGTGCTTTTAACATTTACACACCCATAAACATACTAATAGAAAT 21 8573847 0.941051175 7 17 153 0.791666667 1.278753601 0.166666667 0.095238095 0.208333333 21 5 0 19 3L:8573820-8573898 6 rhea FBtr0333105|FBtr0305210|FBtr0333109|FBtr0333108|FBtr0333106|FBtr0333107 8573788|8573788|8564005|8573788|8573788|8573788 8574409|8574409|8574409|8574409|8574409|8574409 TAGCTT 6mer3-8 dme-miR-79-3p 3L + 8573824 8573853 3'utr rhea FlyBase G21862.1 AAATGTTCTAGCTTGGTTCATGATTGCCAA 5 8573847 0.968137908 3 4 28 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 3L:8573824-8573853 6 9 3350 FBgn0260442 4425.776667 56.13 85.46 0.002033541 0.160342063 0.105312427 -15 -15 -15 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 8574024 8574030 + 3L_8574024_8574030_+ 0.661615645 0.661615645 0.661615645 0 rhea FBtr0333109|FBtr0333108|FBtr0333106|FBtr0333107|FBtr0333105|FBtr0305210 8564005|8573788|8573788|8573788|8573788|8573788 8574409|8574409|8574409|8574409|8574409|8574409 3L + 8573997 8574046 3'utr rhea FlyBase G28873.1 AATCAAGTTTCAATGTTTTCGTATATCTGTGTTCTACGTGTTTATTTGCC 11 8574022 0.992622032 5 9 121 0.916666667 1.041392685 0.083333333 0.090909091 0.166666667 11 1 0 11 3L:8573997-8574046 7 rhea FBtr0333105|FBtr0305210|FBtr0333109|FBtr0333108|FBtr0333106|FBtr0333107 8573788|8573788|8564005|8573788|8573788|8573788 8574409|8574409|8574409|8574409|8574409|8574409 TGTGTTC 7mer-m8 dme-miR-317-3p 3L + 8574008 8574070 3'utr rhea FlyBase G21864.1 AATGTTTTCGTATATCTGTGTTCTACGTGTTTATTTGCCATTAAATTGCCCATATATATTTAT 13 8574022 0.991195885 7 13 138 1 1.322219295 0.19047619 0.384615385 0.619047619 13 0 0 21 3L:8574008-8574070 7 8.5 3351 FBgn0260442 4425.776667 56.13 85.46 0.001920567 0.151434171 0.099461736 2 2 2 0.01 dme-miR-305-3p 7mer-m8 ATGTGCC 3L 8574434 8574440 - 3L_8574434_8574440_- 0.674515655 0.674515655 0.674515655 0 CG6638 FBtr0076651 8574405 8574574 3L - 8574419 8574451 3'utr CG6638 FlyBase G35451.1 TATGTATATGTATGTGCCTTAATAAAAGAAGTA 8 8574438 0.880945592 5 8 67 1 1 0.1 0.25 0.4 8 0 0 10 3L:8574419-8574451 7 CG6638 FBtr0076651 8574405 8574574 ATGTGCC 7mer-m8 dme-miR-305-3p 3L - 8574417 8574446 3'utr CG6638 FlyBase G26825.1 ATATGTATGTGCCTTAATAAAAGAAGTAAA 6 8574438 0.698774397 3 6 39 1 0.954242509 0 0.5 0.666666667 6 0 0 9 3L:8574417-8574446 7 7 3352 FBgn0035911 221 17.94666667 27.59333333 0.031674208 0.390044577 0.253684465 -2 -2 -2 0.01 dme-miR-277-3p 8mer-A1 TGCATTTA 3L 8574495 8574502 - 3L_8574495_8574502_- 0.625364269 0.625364269 0.625364269 0 CG6638 FBtr0076651 8574405 8574574 3L - 8574483 8574563 3'utr CG6638 FlyBase G35452.1 CATCTCTTTTTCCAATGTGGCAATAACGTGGACCAACTCTACTACCTGACAGACTAAATGTTGCATTTATTTTTTGAAGAT 41 8574504 0.885115464 12 37 318 0.916666667 1.643452676 0.125 0.170731707 0.291666667 41 4 0 44 3L:8574483-8574563 8 CG6638 FBtr0076651 8574405 8574574 TGCATTTA 8mer-A1 dme-miR-277-3p 3L - 8574485 8574536 3'utr CG6638 FlyBase G26826.1 GTGGACCAACTCTACTACCTGACAGACTAAATGTTGCATTTATTTTTTGAAG 14 8574503 0.849276496 5 13 125 0.909090909 1.301029996 0.318181818 0.5 0.681818182 14 2 0 20 3L:8574485-8574536 8 17 3353 FBgn0035911 221 17.94666667 27.59333333 0.076923077 0.947251114 0.616090843 2 1 1.5 0.01 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 8678483 8678490 + 3L_8678483_8678490_+ 0.643565469 0.643565469 0.643565469 0 h FBtr0100153|FBtr0076569 8678422|8678422 8679253|8679253 3L + 8678265 8678585 stop_codon h FlyBase G28893.1 AGCTGTAGCTACGCCCCGCCCAGTCCGGCCAACTCTAGCTACGAGCCCATGGACATCAAGCCATCGGTCATCCAGCGCGTGCCAATGGAGCAGCAGCCCCTGTCGCTGGTGATCAAGAAGCAGATCAAGGAGGAGGAGCAGCCCTGGCGGCCCTGGTAGAGGGTGTCTGCATATGCATATCATATAGCATAGCCACCCCTATCGAATCTCCCGCTTTTAAGACTGACCCCCCACAACTCATCCAACTCGCACACATGCGCAGGCGTTGTGCGCATGCGCGTAGACATTTCACATCATTCGCCGGGATTGCGCAAATGTTGC 1311 8678481 0.94834906 48 1139 6193 0.867421719 1.596097044 0.113257828 0.118230359 0.229846769 1311 167 32 1302 3L:8678265-8678585 8 h FBtr0076569|FBtr0100153 8678422|8678422 8679253|8679253 AAGACTGA 8mer-A1 dme-miR-14-3p 3L + 8678259 8678596 stop_codon h FlyBase G21885.1 AGCAGCAGCTGTAGCTACGCCCCGCCCAGTCCGGCCAACTCTAGCTACGAGCCCATGGACATCAAGCCATCGGTCATCCAGCGCGTGCCAATGGAGCAGCAGCCCCTGTCGCTGGTGATCAAGAAGCAGATCAAGGAGGAGGAGCAGCCCTGGCGGCCCTGGTAGAGGGTGTCTGCATATGCATATCATATAGCATAGCCACCCCTATCGAATCTCCCGCTTTTAAGACTGACCCCCCACAACTCATCCAACTCGCACACATGCGCAGGCGTTGTGCGCATGCGCGTAGACATTTCACATCATTCGCCGGGATTGCGCAAATGTTGCTTTGAAGTGTT 885 8678481 0.928873114 47 731 4117 0.827932099 1.729569726 0.143518519 0.340112994 0.549382716 885 204 19 1073 3L:8678259-8678596 8 715 3354 FBgn0001168 3068.926667 171.7433333 259.7866667 0.232980477 4.163189255 2.752258263 2 2 2 0.01 dme-miR-283-5p 6mer3-8 TGATAT 3L 8679113 8679118 + 3L_8679113_8679118_+ 1 1 1 0 h FBtr0100153|FBtr0076569 8678422|8678422 8679253|8679253 3L + 8679084 8679186 3'utr h FlyBase G28896.4 AAACACACAAATCTATTCGTAAGGCCACGTGATATAGTGAACATAATGAGCTTCTAAGAAAACAAAACAAGAATTTGATGCAAGCAAAAGCAAAAAAATCAAC 515 8679118 0.773103064 15 496 2298 0.966076696 2.03809005 0.148967552 0.248543689 0.42920354 515 18 5 655 3L:8679084-8679186 6 h FBtr0076569|FBtr0100153 8678422|8678422 8679253|8679253 TGATAT 6mer3-8 dme-miR-283-5p 3L + 8679085 8679173 3'utr h FlyBase G21886.2 AACACACAAATCTATTCGTAAGGCCACGTGATATAGTGAACATAATGAGCTTCTAAGAAAACAAAACAAGAATTTGATGCAAGCAAAAG 400 8679118 0.729972483 14 390 1809 0.98245614 2.187520721 0.132376396 0.4025 0.618819777 400 8 3 616 3L:8679085-8679173 6 388 3355 FBgn0001168 3068.926667 171.7433333 259.7866667 0.126428567 2.259185218 1.493533155 -5 -5 -5 0.01 dme-bantam-3p 6mer3-8 TGATCT 3L 8725790 8725795 + 3L_8725790_8725795_+ 1 1 1 0 CG6511 FBtr0333887|FBtr0076570 8725510|8725510 8726108|8726108 3L + 8725764 8725865 3'utr CG6511 FlyBase G28919.1 TTTGTAAGCGTTTGGAGACAGTTTTCTGATCTTGTCATCGGCAGCTCGGCTCTTATAAAGTCTGAGGGCCCTGGCCCAAACGTGTCGTTTATCTAGATTAGC 30 8725790 0.808227039 13 28 236 0.921052632 1.544068044 0.131578947 0.233333333 0.394736842 30 3 0 35 3L:8725764-8725865 6 CG6511 FBtr0333887|FBtr0076570 8725510|8725510 8726108|8726108 TGATCT 6mer3-8 dme-bantam-3p 3L + 8725770 8725841 3'utr CG6511 FlyBase G21903.1 AGCGTTTGGAGACAGTTTTCTGATCTTGTCATCGGCAGCTCGGCTCTTATAAAGTCTGAGGGCCCTGGCCCA 23 8725790 0.675211494 8 16 169 0.717948718 1.447158031 0.205128205 0.652173913 0.794871795 23 11 0 28 3L:8725770-8725841 6 15 3356 FBgn0035923 413.53 11.23333333 17.25666667 0.036273064 1.335311573 0.869229283 0 0 0 0.01 dme-miR-11-3p 7mer-m1 TGTGATG 3L 8725908 8725914 + 3L_8725908_8725914_+ 0.612071121 0.612071121 0.612071121 0 CG6511 FBtr0333887|FBtr0076570 8725510|8725510 8726108|8726108 3L + 8725887 8725981 3'utr CG6511 FlyBase G28920.1 ACAAGCTGGCTATATCGGACTTGTGATGGATGTTCAGATCCGTCAATCTTGGCTTGAGGTTTCAGCCGACTTACATTTGCATTGTATTGCGAATA 18 8725901 0.985383597 8 17 142 0.952380952 1.301029996 0.428571429 0.166666667 0.285714286 18 1 0 20 3L:8725887-8725981 7 CG6511 FBtr0333887|FBtr0076570 8725510|8725510 8726108|8726108 TGTGATG 7mer-m1 dme-miR-11-3p 3L + 8725889 8725930 3'utr CG6511 FlyBase G21904.1 AAGCTGGCTATATCGGACTTGTGATGGATGTTCAGATCCGTC 10 8725901 0.975011937 2 10 69 1 1.230448921 0.352941176 0.4 0.647058824 10 0 0 17 3L:8725889-8725930 7 10.5 3357 FBgn0035923 413.53 11.23333333 17.25666667 0.025391145 0.934718101 0.608460498 7 7 7 0.01 dme-miR-79-3p 7mer-m8 TAGCTTT 3L 878166 878172 - 3L_878166_878172_- 0.620204031 0.620204031 0.620204031 0 CG13907 FBtr0072593|FBtr0345005 877289|877289 878452|878452 3L - 878051 878440 3'utr CG13907 FlyBase G33163.1 CGGTTGGAAAGGAGAGAGAAGTGAATTTACAGGGGGCAGTGCGGAGCTTAAGAGGATCCGGTGAGATATTTTTCTATTTACTTATACAGCAGAGGAGGAGGAGATCAGAGATCGAGCACACCTATATACAAAGTGGAGAAGACGGATGGATATATATATAGCCAGCCCCACACCATATATACATATATATATATATATACCTTTAAGCCTAGGCAACAGCGGAGGATGAAGTGCGGAAAATTCACTTTTCTACCAGGAGAACTCAGCTTAGCTTTCGATAAGATATAGAGAAACCTTCGGCTATATATAAAGTTATACTACGCTCATAAATTAACGATCGAAAACTGATACCGATCGCTGGTAGATTGCAACTGTTATACAGCAACCACA 246 878173 0.752724841 45 215 1070 0.884615385 1.289177169 0.22027972 0.142276423 0.262237762 246 21 12 253 3L:878051-878440 7 CG13907 FBtr0345005|FBtr0072593 877289|877289 878452|878452 TAGCTTT 7mer-m8 dme-miR-79-3p 3L - 878129 878187 3'utr CG13907 FlyBase G25093.1 CAGGAGAACTCAGCTTAGCTTTCGATAAGATATAGAGAAACCTTCGGCTATATATAAAG 24 878173 0.788760846 4 22 142 0.894736842 1.230448921 0.157894737 0.416666667 0.631578947 24 3 1 34 3L:878129-878187 7 33 3358 FBgn0035173 483.94 12.91333333 19.71333333 0.068190272 2.555498193 1.673993913 1 1 1 0.01 dme-miR-1006-3p 7mer-A1 GAATTTA 3L 878412 878418 - 3L_878412_878418_- 0.823349562 0.823349562 0.823349562 0 CG13907 FBtr0072593|FBtr0345005 877289|877289 878452|878452 3L - 878051 878440 3'utr CG13907 FlyBase G33163.1 CGGTTGGAAAGGAGAGAGAAGTGAATTTACAGGGGGCAGTGCGGAGCTTAAGAGGATCCGGTGAGATATTTTTCTATTTACTTATACAGCAGAGGAGGAGGAGATCAGAGATCGAGCACACCTATATACAAAGTGGAGAAGACGGATGGATATATATATAGCCAGCCCCACACCATATATACATATATATATATATATACCTTTAAGCCTAGGCAACAGCGGAGGATGAAGTGCGGAAAATTCACTTTTCTACCAGGAGAACTCAGCTTAGCTTTCGATAAGATATAGAGAAACCTTCGGCTATATATAAAGTTATACTACGCTCATAAATTAACGATCGAAAACTGATACCGATCGCTGGTAGATTGCAACTGTTATACAGCAACCACA 246 878414 0.752724841 45 215 1070 0.884615385 1.289177169 0.22027972 0.142276423 0.262237762 246 21 12 253 3L:878051-878440 7 CG13907 FBtr0345005|FBtr0072593 877289|877289 878452|878452 GAATTTA 7mer-A1 dme-miR-1006-3p 3L - 878289 878453 stop_codon CG13907 FlyBase G25094.1 AGGAGACTTCGATCGGTTGGAAAGGAGAGAGAAGTGAATTTACAGGGGGCAGTGCGGAGCTTAAGAGGATCCGGTGAGATATTTTTCTATTTACTTATACAGCAGAGGAGGAGGAGATCAGAGATCGAGCACACCTATATACAAAGTGGAGAAGACGGATGGATA 100 878414 0.69796408 22 87 357 0.869863014 1.200713734 0.226027397 0.35 0.554794521 100 12 7 127 3L:878289-878453 7 40.5 3359 FBgn0035173 483.94 12.91333333 19.71333333 0.083688061 3.136293237 2.054447075 -4 -4 -4 0.01 dme-bantam-3p 7mer-A1 GATCTCA 3L 8798299 8798305 + 3L_8798299_8798305_+ 0.823349562 0.823349562 0.823349562 0 Fhos FBtr0306631|FBtr0306630|FBtr0306632|FBtr0333888|FBtr0302584|FBtr0302085|FBtr0302583|FBtr0333889 8798193|8797744|8798193|8798193|8797744|8798193|8797647|8798193 8798719|8798719|8798719|8798719|8798719|8798719|8798719|8798719 3L + 8798257 8798312 3'utr Fhos FlyBase G28923.1 GACGTCACAAGTCGGGCACTACGCGCACAGACTGAAATTGGCGATCTCAGGCGAGC 10 8798294 0.852523294 3 10 34 1 1.146128036 0.285714286 0.4 0.571428571 10 0 0 14 3L:8798257-8798312 7 Fhos FBtr0302584|FBtr0302085|FBtr0302583|FBtr0333889|FBtr0306631|FBtr0306630|FBtr0306632|FBtr0333888 8797744|8798193|8797647|8798193|8798193|8797744|8798193|8798193 8798719|8798719|8798719|8798719|8798719|8798719|8798719|8798719 GATCTCA 7mer-A1 dme-bantam-3p 3L + 8798275 8798325 3'utr Fhos FlyBase G21908.1 CTACGCGCACAGACTGAAATTGGCGATCTCAGGCGAGCAAGCGAACCCAGA 14 8798295 0.944178409 3 12 50 0.909090909 1 0.318181818 0.428571429 0.636363636 14 1 1 20 3L:8798275-8798325 7 9 3360 FBgn0266084 182.0533333 3.39 5.253333333 0.049436063 2.654867257 1.71319797 5 4 4.5 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3L 8890906 8890912 + 3L_8890906_8890912_+ 0.443131018 0.443131018 0.443131018 0 dally FBtr0305901 8889317 8891192 3L + 8890877 8890932 3'utr dally FlyBase G28925.1 ATTTGTATCATTATTATTTAACTATTGCATGTGATTAATAATATTTAAGTTAAACG 47 8890902 0.785910368 5 43 526 0.921568627 1.371067862 0.058823529 0.042553191 0.117647059 47 3 1 47 3L:8890877-8890932 7 dally FBtr0305901 8889317 8891192 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 8890886 8890930 3'utr dally FlyBase G21910.1 ATTATTATTTAACTATTGCATGTGATTAATAATATTTAAGTTAAA 22 8890902 0.769376841 4 18 236 0.842105263 1.505149978 0 0.454545455 0.684210526 22 6 0 32 3L:8890886-8890930 7 33.5 3361 FBgn0263930 612.92 16.66666667 25.74 0.054656399 2.01 1.301476301 4 4 4 0.01 dme-miR-986-5p 7mer-m8 ATTCGAG 3L 892325 892331 + 3L_892325_892331_+ 0.671796708 0.671796693 0.6717967 0 CG32479 FBtr0333267|FBtr0333266|FBtr0072589 892174|892174|892174 895313|893520|893520 3L + 892275 892357 3'utr CG32479 FlyBase G26957.1 GCGAGTTTGGTTTTATATGCATATACATATACAAATTAACAATTAGATATATTCGAGCGGTATATAGTTAAGCCCAAAGTCCA 15 892323 0.72800944 11 13 104 0.894736842 0.929418926 0.105263158 0.133333333 0.315789474 15 1 1 17 3L:892275-892357 7 CG32479 FBtr0072589|FBtr0333266|FBtr0333267 892174|892174|892174 893520|893520|895313 ATTCGAG 7mer-m8 dme-miR-986-5p 3L + 892267 892343 3'utr CG32479 FlyBase G20405.1 GCGAGAATGCGAGTTTGGTTTTATATGCATATACATATACAAATTAACAATTAGATATATTCGAGCGGTATATAGTT 9 892310 0.987675896 6 7 73 0.857142857 1.079181246 0.142857143 0.333333333 0.571428571 9 2 0 12 3L:892267-892343 7 6 3362 FBgn0052479 4815.663333 78.18666667 119.8133333 0.001245934 0.076739427 0.050077899 2 15 8.5 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 3L 892480 892486 + 3L_892480_892486_+ 0.782911824 0.782911824 0.782911824 0 CG32479 FBtr0333267|FBtr0333266|FBtr0072589 892174|892174|892174 895313|893520|893520 3L + 892425 892521 3'utr CG32479 FlyBase G26958.2 TTAAGGTTGAGTAGAAAAATAGGCAGCAAAAGAAACTCGTTGGAACGAAAACTTTGTACAAAGAGAAACGAAAGAACTCTGTAAACTAAACAGCGAG 313 892478 0.989908944 14 307 1020 0.98944591 1.971971276 0.319261214 0.166134185 0.311345646 313 1 3 375 3L:892425-892521 7 CG32479 FBtr0072589|FBtr0333266|FBtr0333267 892174|892174|892174 893520|893520|895313 GTACAAA 7mer-A1 dme-miR-305-5p 3L + 892416 892521 3'utr CG32479 FlyBase G20406.2 AGACTAGAATTAAGGTTGAGTAGAAAAATAGGCAGCAAAAGAAACTCGTTGGAACGAAAACTTTGTACAAAGAGAAACGAAAGAACTCTGTAAACTAAACAGCGAG 243 892478 0.940600746 14 238 821 0.983002833 2.06320822 0.348441926 0.33744856 0.543909348 243 4 2 347 3L:892416-892521 7 201.5 3363 FBgn0052479 4815.663333 78.18666667 119.8133333 0.041842626 2.577165757 1.681782773 2 2 2 0.01 dme-miR-1006-3p 6mer2-7 GAATTT 3L 8932547 8932552 - 3L_8932547_8932552_- 1 1 1 0 CG43783 FBtr0331518|FBtr0331519|FBtr0331516|FBtr0331517 8932233|8932233|8932233|8932233 8933062|8933062|8933062|8933062 3L - 8932538 8932578 3'utr CG43783 FlyBase G35492.1 AAGTAGATTAGTCCTAGAATGCGTGTGAATTTTAAATAAGA 18 8932559 0.873391453 3 17 152 0.956521739 1.342422681 0.086956522 0.277777778 0.434782609 18 1 0 22 3L:8932538-8932578 6 CG43783 FBtr0331517|FBtr0331516|FBtr0331519|FBtr0331518 8932233|8932233|8932233|8932233 8933062|8933062|8933062|8933062 GAATTT 6mer2-7 dme-miR-1006-3p 3L - 8932543 8932573 3'utr CG43783 FlyBase G26854.1 GATTAGTCCTAGAATGCGTGTGAATTTTAAA 7 8932548 0.713790937 3 7 57 1 1.079181246 0.416666667 0.428571429 0.666666667 7 0 0 12 3L:8932543-8932573 6 12 3364 FBgn0264305 845.6866667 21.05333333 32.24666667 0.014189653 0.569981001 0.372131486 7 -4 1.5 0.01 dme-miR-986-5p 7mer-m8 ATTCGAG 3L 893255 893261 + 3L_893255_893261_+ 0.671796708 0.670457304 0.671127006 0.000947099 CG32479 FBtr0333267|FBtr0333266|FBtr0072589 892174|892174|892174 895313|893520|893520 3L + 893214 893307 3'utr CG32479 FlyBase G26962.1 GATTGTCTCCCCGGCTTGGATGCGATGTTTGCCTTCATGATATTCGAGTCCTTAACTTTCTTTTCTCAGACCTAGAGCATTTAGTTTGTACATC 37 893256 0.989470011 10 36 349 0.955555556 1.633468456 0.044444444 0.162162162 0.311111111 37 2 0 43 3L:893214-893307 7 CG32479 FBtr0072589|FBtr0333266|FBtr0333267 892174|892174|892174 893520|893520|895313 ATTCGAG 7mer-m8 dme-miR-986-5p 3L + 893217 893276 3'utr CG32479 FlyBase G20411.1 TGTCTCCCCGGCTTGGATGCGATGTTTGCCTTCATGATATTCGAGTCCTTAACTTTCTTT 28 893255 0.759927122 7 26 255 0.961538462 1.397940009 0.038461538 0.5 0.730769231 28 1 1 50 3L:893217-893276 7 28 3365 FBgn0052479 4815.663333 78.18666667 119.8133333 0.00581436 0.358117326 0.233696862 -1 0 -0.5 0.01 dme-miR-965-3p 7mer-A1 ACGCTTA 3L 8932826 8932832 - 3L_8932826_8932832_- 0.823349562 0.823349562 0.823349562 0 CG43783 FBtr0331518|FBtr0331519|FBtr0331516|FBtr0331517 8932233|8932233|8932233|8932233 8933062|8933062|8933062|8933062 3L - 8932812 8932875 3'utr CG43783 FlyBase G35493.1 GATGAGTACAAGGGACGACCGATTCCGAATGACAAGTTACAAAACGCTTATTTTCATCACATTC 14 8932824 0.973028007 7 12 73 0.941176471 1.204119983 0.235294118 0.214285714 0.352941176 14 1 0 16 3L:8932812-8932875 7 CG43783 FBtr0331517|FBtr0331516|FBtr0331519|FBtr0331518 8932233|8932233|8932233|8932233 8933062|8933062|8933062|8933062 ACGCTTA 7mer-A1 dme-miR-965-3p 3L - 8932816 8932847 3'utr CG43783 FlyBase G26855.1 ATGACAAGTTACAAAACGCTTATTTTCATCAC 7 8932825 0.60037647 3 6 47 1 1 0.1 0.285714286 0.5 7 0 0 10 3L:8932816-8932847 7 7 3366 FBgn0264305 845.6866667 21.05333333 32.24666667 0.008277297 0.332488917 0.2170767 -8 -7 -7.5 0.01 dme-bantam-3p 6mer2-7 GATCTC 3L 8932914 8932919 - 3L_8932914_8932919_- 1 1 1 0 CG43783 FBtr0331518|FBtr0331519|FBtr0331516|FBtr0331517 8932233|8932233|8932233|8932233 8933062|8933062|8933062|8933062 3L - 8932890 8932938 5'utr-coding CG43783 FlyBase G35494.1 AAGCTTAGATTAAATTTTCGATCTCCAGTTCCGGTTTCGAATACTTAAT 19 8932923 0.985993081 6 18 186 0.954545455 1.021189299 0.045454545 0.157894737 0.272727273 19 0 1 21 3L:8932890-8932938 6 CG43783 FBtr0331517|FBtr0331516|FBtr0331519|FBtr0331518 8932233|8932233|8932233|8932233 8933062|8933062|8933062|8933062 GATCTC 6mer2-7 dme-bantam-3p 3L - 8932897 8932937 5'utr-coding CG43783 FlyBase G26856.1 AGCTTAGATTAAATTTTCGATCTCCAGTTCCGGTTTCGAAT 14 8932923 0.686548543 5 11 136 0.8 1.204119983 0 0.357142857 0.55 14 4 0 16 3L:8932897-8932937 6 16 3367 FBgn0264305 845.6866667 21.05333333 32.24666667 0.018919537 0.759974668 0.496175315 4 4 4 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 3L 893403 893408 + 3L_893403_893408_+ 1 1 1 0 CG32479 FBtr0333267|FBtr0333266|FBtr0072589 892174|892174|892174 895313|893520|893520 3L + 893337 893422 3'utr CG32479 FlyBase G26963.1 AAAAGATTTGAATGGGAATAATTATTAAATGTAATCGGGTACGAACTAAAGCTAATCAACCATACTAGTTAATAGATGTCTTACAA 24 893392 0.882833092 8 22 177 0.961538462 1.397940009 0.192307692 0.130434783 0.230769231 23 1 0 25 3L:893337-893422 6 CG32479 FBtr0072589|FBtr0333266|FBtr0333267 892174|892174|892174 893520|893520|895313 AGTTAA 6mer3-8 dme-miR-999-3p 3L + 893368 893448 3'utr CG32479 FlyBase G20412.1 TAATCGGGTACGAACTAAAGCTAATCAACCATACTAGTTAATAGATGTCTTACAAACGTATACACCCATATATATTTTCTT 13 893417 0.872728849 7 13 97 1 1.278753601 0 0.307692308 0.526315789 13 0 0 19 3L:893368-893448 6 10.5 3368 FBgn0052479 4815.663333 78.18666667 119.8133333 0.002180385 0.134293997 0.087636323 11 -14 -1.5 0.01 dme-miR-263a-5p 6mer3-8 GTGCCA 3L 893491 893496 + 3L_893491_893496_+ 1 1 1 0 CG32479 FBtr0333267|FBtr0333266|FBtr0072589 892174|892174|892174 895313|893520|893520 3L + 893469 893526 3'utr-intron CG32479 FlyBase G26964.1 ATATATATTATTTATAGATATCGTGCCAATGTTAAAACATCTAAAAATTTTCAAAAAA 12 893499 0.708699866 8 12 106 1 1.079181246 0.166666667 0 0 12 0 0 12 3L:893469-893526 6 CG32479 FBtr0072589|FBtr0333266|FBtr0333267 892174|892174|892174 893520|893520|895313 GTGCCA 6mer3-8 dme-miR-263a-5p 3L + 893473 893518 3'utr CG32479 FlyBase G20413.1 ATATTATTTATAGATATCGTGCCAATGTTAAAACATCTAAAAATTT 11 893492 0.771565008 4 10 87 0.9375 1.176091259 0 0.363636364 0.5625 11 1 0 15 3L:893473-893518 6 10.5 3369 FBgn0052479 4815.663333 78.18666667 119.8133333 0.002180385 0.134293997 0.087636323 -8 -1 -4.5 0.01 dme-miR-79-3p 7mer-A1 AGCTTTA 3L 8939394 8939400 - 3L_8939394_8939400_- 0.823349562 0.823349562 0.823349562 0 orb2 FBtr0331515|FBtr0331514 8937098|8939063 8942890|8942890 3L - 8939376 8939411 3'utr orb2 FlyBase G35506.1 GTCGGATTGACAGCTTTAGTTTTATAGAGAATCTTG 12 8939395 0.870360101 5 12 109 1 1.204119983 0.25 0.25 0.4375 12 0 0 16 3L:8939376-8939411 7 orb2 FBtr0331515|FBtr0331514 8937098|8939063 8942890|8942890 AGCTTTA 7mer-A1 dme-miR-79-3p 3L - 8939380 8939410 3'utr orb2 FlyBase G26863.1 TCGGATTGACAGCTTTAGTTTTATAGAGAAT 5 8939396 0.78121999 2 4 47 0.769230769 1 0.230769231 0.8 0.923076923 5 3 0 10 3L:8939380-8939410 7 8.5 3370 FBgn0264307 292.6133333 6.573333333 10.15 0.029048574 1.293103448 0.837438424 -5 -4 -4.5 0.01 dme-miR-190-5p 6mer3-8 ACATAT 3L 893984 893989 + 3L_893984_893989_+ 1 1 1 0 CG32479 FBtr0333267 892174 895313 3L + 893962 893999 3'utr CG32479 FlyBase G26966.1 TATATATATATTTTGATGTTATACATATATGAACTAAT 7 893978 0.770499134 3 4 69 0.636363636 0.84509804 0.363636364 0.571428571 0.727272727 7 4 0 7 3L:893962-893999 6 CG32479 FBtr0333267 892174 895313 ACATAT 6mer3-8 dme-miR-190-5p 3L + 893959 894019 3'utr CG32479 FlyBase G20415.1 ATATATATATATATTTTGATGTTATACATATATGAACTAATTTTAAGCGAAATTATAGGAT 7 893988 0.987964356 6 7 68 1 1.041392685 0.363636364 0.428571429 0.636363636 7 0 0 11 3L:893959-894019 6 5.5 3371 FBgn0052479 4815.663333 78.18666667 119.8133333 0.001142106 0.070344475 0.045904741 6 -4 1 0.01 dme-miR-317-3p 8mer-A1 TGTGTTCA 3L 8941267 8941274 - 3L_8941267_8941274_- 0.631136783 0.631136783 0.631136783 0 orb2 FBtr0331515|FBtr0331514 8937098|8939063 8942890|8942890 3L - 8941247 8941294 3'utr orb2 FlyBase G35508.1 AACAAAACAGTCAAATTGCTTGTGTTCAGTATTATGATTTATTTATGA 48 8941273 0.617789618 7 48 460 1 1.77815125 0.233333333 0.1875 0.35 48 0 0 60 3L:8941247-8941294 8 orb2 FBtr0331515|FBtr0331514 8937098|8939063 8942890|8942890 TGTGTTCA 8mer-A1 dme-miR-317-3p 3L - 8941249 8941290 3'utr orb2 FlyBase G26865.1 AAACAGTCAAATTGCTTGTGTTCAGTATTATGATTTATTTAT 40 8941274 0.659603857 5 38 390 0.962962963 1.716003344 0.203703704 0.275 0.462962963 40 2 0 52 3L:8941249-8941290 8 43.5 3372 FBgn0264307 292.6133333 6.573333333 10.15 0.148660348 6.617647059 4.285714286 -1 0 -0.5 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 3L 8941368 8941374 - 3L_8941368_8941374_- 0.620204266 0.620204266 0.620204266 0 orb2 FBtr0331515|FBtr0331513|FBtr0331514 8937098|8941311|8939063 8942890|8942890|8942890 3L - 8941350 8941402 3'utr orb2 FlyBase G35509.1 AACAACACATTTACACTGAAAGTCTGTTTGCATTTGTTGCCATTTGGCTTAAT 14 8941375 0.870932845 5 13 118 0.941176471 1.204119983 0.176470588 0.214285714 0.352941176 14 1 0 16 3L:8941350-8941402 7 orb2 FBtr0331515|FBtr0331513|FBtr0331514 8937098|8941311|8939063 8942890|8942890|8942890 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 8941350 8941402 3'utr orb2 FlyBase G26866.1 AACAACACATTTACACTGAAAGTCTGTTTGCATTTGTTGCCATTTGGCTTAAT 11 8941375 0.858351224 5 11 102 1 1.176091259 0.066666667 0.272727273 0.466666667 11 0 0 15 3L:8941350-8941402 7 9.5 3373 FBgn0264307 292.6133333 6.573333333 10.15 0.032466053 1.445233266 0.935960591 1 1 1 0.01 dme-miR-282-5p 7mer-A1 GAGGCTA 3L 8942186 8942192 - 3L_8942186_8942192_- 0.823346037 0.823345919 0.823345978 7.07E-08 orb2 FBtr0331515|FBtr0331513|FBtr0331514 8937098|8941311|8939063 8942890|8942890|8942890 3L - 8942147 8942205 3'utr orb2 FlyBase G35513.1 TTGTATGCCAATCGAGGCTAGTCCTAAAATTATTAGTGAGCTGCTCACCCTCTCTCGAA 12 8942195 0.971319829 5 10 65 0.823529412 1.146128036 0.235294118 0.333333333 0.529411765 12 3 0 14 3L:8942147-8942205 7 orb2 FBtr0331515|FBtr0331513|FBtr0331514 8937098|8941311|8939063 8942890|8942890|8942890 GAGGCTA 7mer-A1 dme-miR-282-5p 3L - 8942133 8942208 3'utr orb2 FlyBase G26867.1 ATCTTGTATGCCAATCGAGGCTAGTCCTAAAATTATTAGTGAGCTGCTCACCCTCTCTCGAAAAGGCTTTTTGCTT 10 8942181 0.974224651 7 10 63 1 1.113943352 0.153846154 0.3 0.461538462 10 0 0 13 3L:8942133-8942208 7 8 3374 FBgn0264307 292.6133333 6.573333333 10.15 0.027339834 1.21703854 0.78817734 3 -11 -4 0.01 dme-miR-34-5p 6mer2-7 ACTGCC 3L 894597 894602 + 3L_894597_894602_+ 1 1 1 0 CG32479 FBtr0333267 892174 895313 3L + 894581 894628 3'utr CG32479 FlyBase G26970.1 TTTTTTGTAAGCTCCAACTGCCTGATGGTCTTGAAACGCACTGTTCTG 57 894605 0.776348137 5 54 352 0.973684211 1.568201724 0.328947368 0.263157895 0.447368421 57 1 1 74 3L:894581-894628 6 CG32479 FBtr0333267 892174 895313 ACTGCC 6mer2-7 dme-miR-34-5p 3L + 894584 894618 3'utr CG32479 FlyBase G20418.1 TTTGTAAGCTCCAACTGCCTGATGGTCTTGAAACG 45 894604 0.782563841 4 39 230 0.890625 1.45484486 0.390625 0.409090909 0.59375 44 6 1 57 3L:894584-894618 6 47.5 3375 FBgn0052479 4815.663333 78.18666667 119.8133333 0.009863646 0.607520464 0.396450033 -8 -7 -7.5 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG 3L 894753 894758 + 3L_894753_894758_+ 1 1 1 0 CG32479 FBtr0333267 892174 895313 3L + 894685 894776 3'utr CG32479 FlyBase G26971.1 TTGTAATACCCAAGTCACATTCTGTTGTCCCCGATTAATGTATGTTTTAGTTTTAAGTAGTTTCTAAGGCTGTGTAACTAACTAACATAAGT 49 894746 0.98993941 14 45 542 0.927272727 1.707570176 0.036363636 0.102040816 0.2 49 4 0 51 3L:894685-894776 6 CG32479 FBtr0333267 892174 895313 GCTGTG 6mer2-7 dme-miR-1008-3p 3L + 894689 894776 3'utr CG32479 FlyBase G20419.1 AATACCCAAGTCACATTCTGTTGTCCCCGATTAATGTATGTTTTAGTTTTAAGTAGTTTCTAAGGCTGTGTAACTAACTAACATAAGT 42 894747 0.993944659 14 35 451 0.852459016 1.414973348 0.081967213 0.357142857 0.557377049 42 8 1 52 3L:894689-894776 6 40.5 3376 FBgn0052479 4815.663333 78.18666667 119.8133333 0.008410056 0.517991132 0.338025818 7 6 6.5 0.01 dme-miR-14-3p 7mer-m8 AAGACTG 3L 8961313 8961319 - 3L_8961313_8961319_- 0.671795829 0.671795827 0.671795828 0 CG5660 FBtr0346542|FBtr0076560 8961272|8961272 8961399|8961399 3L - 8961298 8961336 3'utr CG5660 FlyBase G35523.1 CTGTTTGTTTAGAATTAAAGACTGCAATATTTATTAAAT 14 8961322 0.755189438 5 14 114 1 1.176091259 0.133333333 0.071428571 0.133333333 14 0 0 15 3L:8961298-8961336 7 CG5660 FBtr0346542|FBtr0076560 8961272|8961272 8961399|8961399 AAGACTG 7mer-m8 dme-miR-14-3p 3L - 8961298 8961330 3'utr CG5660 FlyBase G26875.1 GTTTAGAATTAAAGACTGCAATATTTATTAAAT 8 8961322 0.73731544 5 8 54 1 1.041392685 0.272727273 0.375 0.545454545 8 0 0 11 3L:8961298-8961330 7 11 3377 FBgn0035942 106.3333333 4.03 6.186666667 0.103448276 2.729528536 1.778017241 3 3 3 0.01 dme-miR-986-5p 6mer3-8 ATTCGA 3L 8971527 8971532 + 3L_8971527_8971532_+ 1 1 1 0 CG5026 FBtr0076516 8971179 8971752 3L + 8971498 8971545 3'utr CG5026 FlyBase G28964.1 ACGCTCTCTACTCTCAGACTCAGATTGGGATTCGAAACAGCACAATGC 17 8971522 0.956905103 4 17 81 1 1.322219295 0.095238095 0.176470588 0.333333333 17 0 0 21 3L:8971498-8971545 6 CG5026 FBtr0076516 8971179 8971752 ATTCGA 6mer3-8 dme-miR-986-5p 3L + 8971478 8971544 3'utr CG5026 FlyBase G21934.1 AAGAAAACTCTCCTTGTAAAACGCTCTCTACTCTCAGACTCAGATTGGGATTCGAAACAGCACAATG 21 8971522 0.962633934 4 20 104 0.882352941 1.477121255 0.058823529 0.285714286 0.558823529 21 4 0 30 3L:8971478-8971544 6 16 3378 FBgn0035945 330 15.41 23.52 0.048484848 1.038286827 0.680272109 5 5 5 0.01 dme-miR-8-3p 7mer-A1 AGTATTA 3L 8971682 8971688 + 3L_8971682_8971688_+ 0.823349562 0.823349562 0.823349562 0 CG5026 FBtr0076516 8971179 8971752 3L + 8971584 8971694 3'utr CG5026 FlyBase G28965.1 TTTTATGGAATTTTTAGCGTATAAGTCTCCAAAATTACCTATTTATAGTACTTACTTGTGTCAGTTATTTAGTGGTCAACAAGCCACAGATCAAATTAAGTATTATAAACT 9 8971680 0.984019702 6 9 78 1 0.954242509 0 0 0 9 0 0 9 3L:8971584-8971694 7 CG5026 FBtr0076516 8971179 8971752 AGTATTA 7mer-A1 dme-miR-8-3p 3L + 8971661 8971697 3'utr CG5026 FlyBase G21935.1 AACAAGCCACAGATCAAATTAAGTATTATAAACTCAA 5 8971680 0.976598387 3 5 34 1 0.698970004 0 0 0 5 0 0 5 3L:8971661-8971697 7 4.5 3379 FBgn0035945 330 15.41 23.52 0.013636364 0.29201817 0.191326531 2 2 2 0.01 dme-miR-252-5p 6mer3-8 GTACTT 3L 8972165 8972170 - 3L_8972165_8972170_- 1 1 1 0 pix FBtr0076557|FBtr0076558 8972054|8972054 8972332|8972332 3L - 8972145 8972256 3'utr pix FlyBase G35527.1 TTCTTTCGTTGAAGAACACATTTGCTTTCAAATTAATTTGTTATTGTTGTCGAGGATTGCGTACAATCGAAAATTGGGGATTAATTGTACTTGATTAAAGTGAGTTTTATAT 32 8972171 0.769394638 12 30 265 0.972222222 1.243038049 0.361111111 0.125 0.222222222 32 0 1 35 3L:8972145-8972256 6 pix FBtr0076557|FBtr0076558 8972054|8972054 8972332|8972332 GTACTT 6mer3-8 dme-miR-252-5p 3L - 8972143 8972196 3'utr pix FlyBase G26878.1 GTACAATCGAAAATTGGGGATTAATTGTACTTGATTAAAGTGAGTTTTATATAC 21 8972171 0.980609178 6 20 182 1 1.447158031 0.464285714 0.238095238 0.428571429 21 0 0 28 3L:8972143-8972196 6 21 3380 FBgn0086706 1403.55 77.59666667 118.19 0.01496206 0.270630182 0.177680007 1 1 1 0.01 dme-miR-190-5p 6mer3-8 ACATAT 3L 8991030 8991035 - 3L_8991030_8991035_- 1 1 1 0 smg FBtr0076550|FBtr0076551|FBtr0076549|FBtr0290103|FBtr0290104 8990315|8990315|8990315|8990315|8990315 8991495|8991495|8991495|8992080|8991495 3L - 8991009 8991048 3'utr smg FlyBase G35549.1 GAGAATCGGAACCACATATTGTATTTTGCATATTTAAGCG 7 8991032 0.983461999 2 6 50 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 3L:8991009-8991048 6 smg FBtr0290104|FBtr0076549|FBtr0290103|FBtr0076550|FBtr0076551 8990315|8990315|8990315|8990315|8990315 8991495|8991495|8992080|8991495|8991495 ACATAT 6mer3-8 dme-miR-190-5p 3L - 8991004 8991054 3'utr smg FlyBase G26896.1 GTGTTTGAGAATCGGAACCACATATTGTATTTTGCATATTTAAGCGTAAGC 6 8991031 0.976975838 3 5 43 1 1.113943352 0.461538462 0.666666667 0.846153846 6 0 0 13 3L:8991004-8991054 6 5 3381 FBgn0016070 840.7666667 21.58333333 33.01666667 0.005946953 0.231660232 0.151438667 -3 -4 -3.5 0.01 dme-miR-190-5p 6mer3-8 ACATAT 3L 8991150 8991155 - 3L_8991150_8991155_- 1 1 1 0 smg FBtr0076550|FBtr0076551|FBtr0076549|FBtr0290103|FBtr0290104 8990315|8990315|8990315|8990315|8990315 8991495|8991495|8991495|8992080|8991495 3L - 8991122 8991162 3'utr smg FlyBase G35551.1 AAAAGGAACATATTTGCTGAACCGTAACTGCACCAGAGGAA 9 8991149 0.945812603 5 8 41 0.923076923 1.079181246 0.461538462 0.444444444 0.615384615 9 1 0 12 3L:8991122-8991162 6 smg FBtr0290104|FBtr0076549|FBtr0290103|FBtr0076550|FBtr0076551 8990315|8990315|8990315|8990315|8990315 8991495|8991495|8992080|8991495|8991495 ACATAT 6mer3-8 dme-miR-190-5p 3L - 8991127 8991161 3'utr smg FlyBase G26897.1 AAAGGAACATATTTGCTGAACCGTAACTGCACCAG 7 8991149 0.744677543 4 5 35 0.636363636 0.84509804 0.545454545 0.428571429 0.636363636 7 4 0 7 3L:8991127-8991161 6 6 3382 FBgn0016070 840.7666667 21.58333333 33.01666667 0.007136344 0.277992278 0.181726401 -6 -6 -6 0.01 dme-miR-932-5p 8mer-A1 GGAATTGA 3L 8991290 8991297 - 3L_8991290_8991297_- 0.607196183 0.674982804 0.641089493 0.047932365 smg FBtr0076550|FBtr0076551|FBtr0076549|FBtr0290103|FBtr0290104 8990315|8990315|8990315|8990315|8990315 8991495|8991495|8991495|8992080|8991495 3L - 8991255 8991320 3'utr smg FlyBase G35552.1 AAGGAAGAAAGCTGGATGGAGAGGGAATTGAAAAGTGAGAATTGAGAAACGAGAGCTGATAATTGT 18 8991293 0.867540953 7 16 63 0.909090909 1 0.045454545 0.166666667 0.318181818 18 1 1 20 3L:8991255-8991320 8 smg FBtr0290104|FBtr0076549|FBtr0290103|FBtr0076550|FBtr0076551 8990315|8990315|8990315|8990315|8990315 8991495|8991495|8992080|8991495|8991495 GGAATTGA 8mer-A1 dme-miR-932-5p 3L - 8991278 8991320 3'utr smg FlyBase G26899.1 AAGGAAGAAAGCTGGATGGAGAGGGAATTGAAAAGTGAGAATT 6 8991293 0.856498459 3 6 16 1 1.113943352 0 0.666666667 0.846153846 6 0 0 13 3L:8991278-8991320 8 10 3383 FBgn0016070 840.7666667 21.58333333 33.01666667 0.011893906 0.463320463 0.302877335 -4 -4 -4 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 3L 8991353 8991359 - 3L_8991353_8991359_- 0.823349562 0.823349562 0.823349562 0 smg FBtr0076550|FBtr0076551|FBtr0076549|FBtr0290103|FBtr0290104 8990315|8990315|8990315|8990315|8990315 8991495|8991495|8991495|8992080|8991495 3L - 8991331 8991386 3'utr smg FlyBase G35553.1 TAAAATGAACTCTGCATCGTGACCATGAGACTGACTAAGATTACTTTTCGCAACTA 934 8991361 0.948247331 10 919 6276 0.98394712 2.540746464 0.271010387 0.124197002 0.227573182 934 15 2 1042 3L:8991331-8991386 7 smg FBtr0290104|FBtr0076549|FBtr0290103|FBtr0076550|FBtr0076551 8990315|8990315|8990315|8990315|8990315 8991495|8991495|8992080|8991495|8991495 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 8991332 8991384 3'utr smg FlyBase G26900.1 AAATGAACTCTGCATCGTGACCATGAGACTGACTAAGATTACTTTTCGCAACT 481 8991361 0.932388816 7 466 3020 0.973262032 2.862131379 0.279411765 0.376299376 0.598930481 481 20 0 728 3L:8991332-8991384 7 702.5 3384 FBgn0016070 840.7666667 21.58333333 33.01666667 0.835546921 32.54826255 21.27713276 2 2 2 0.01 dme-miR-1008-3p 8mer-A1 AGCTGTGA 3L 9002317 9002324 + 3L_9002317_9002324_+ 0.643565408 0.643147853 0.643356631 0.000295217 CG5087 FBtr0076520|FBtr0333908 9002128|9002128 9002566|9002566 3L + 9002293 9002344 3'utr CG5087 FlyBase G28992.1 ATTAAGAAGTAAACATAAACGTATAGCTGTGATAAAACTATAATAAACTAAC 156 9002316 0.768287288 6 145 932 0.932960894 1.921686475 0.005586592 0.128205128 0.240223464 156 11 1 167 3L:9002293-9002344 8 CG5087 FBtr0076520|FBtr0333908 9002128|9002128 9002566|9002566 AGCTGTGA 8mer-A1 dme-miR-1008-3p 3L + 9002296 9002342 3'utr CG5087 FlyBase G21949.1 AAGAAGTAAACATAAACGTATAGCTGTGATAAAACTATAATAAACTA 90 9002316 0.721167928 8 79 520 0.893129771 1.591064607 0.007633588 0.322222222 0.534351145 90 12 2 117 3L:9002296-9002342 8 123 3385 FBgn0035953 365.8866667 11.12666667 17.00666667 0.33616967 11.05452367 7.23245786 1 1 1 0.01 dme-miR-283-5p 7mer-m8 TGATATT 3L 9067509 9067515 - 3L_9067509_9067515_- 0.620203677 0.620203677 0.620203677 0 CG4911 FBtr0345351 9067193 9070515 3L - 9067445 9067519 3'utr CG4911 FlyBase G35570.1 AGATTGATATTCCAGTCAGGATGAAAAGTGAAGATGAGAATGATTCAAATGTTAAATTATATATCGATATGTAGT 66 9067510 0.97437354 6 65 409 0.988095238 1.618048097 0.226190476 0.257575758 0.416666667 66 0 1 83 3L:9067445-9067519 7 CG4911 FBtr0345351 9067193 9070515 TGATATT 7mer-m8 dme-miR-283-5p 3L - 9067465 9067519 3'utr CG4911 FlyBase G26916.1 AGATTGATATTCCAGTCAGGATGAAAAGTGAAGATGAGAATGATTCAAATGTTAA 50 9067510 0.889100063 5 50 283 1 1.892094603 0.230769231 0.38 0.602564103 50 0 0 78 3L:9067465-9067519 7 46 3386 FBgn0035959 1732.163333 43.72333333 67.07666667 0.026556387 1.052069833 0.685782438 -5 -5 -5 0.01 dme-miR-1008-3p 8mer-A1 AGCTGTGA 3L 9067849 9067856 - 3L_9067849_9067856_- 0.637914711 0.608837425 0.623376068 0.020560756 CG4911 FBtr0345351 9067193 9070515 3L - 9067834 9067884 3'utr CG4911 FlyBase G35572.1 TAAAAGTTATAAGAGCAAAAGTGAAGAAAGCTGTGATACAACAAGATCCAA 13 9067863 0.920346242 5 11 38 0.941176471 1.204119983 0.117647059 0.230769231 0.411764706 13 1 0 16 3L:9067834-9067884 8 CG4911 FBtr0345351 9067193 9070515 AGCTGTGA 8mer-A1 dme-miR-1008-3p 3L - 9067843 9067899 3'utr CG4911 FlyBase G26917.1 TATGCAAGTTATGCTTAAAAGTTATAAGAGCAAAAGTGAAGAAAGCTGTGATACAAC 10 9067853 0.957703963 4 8 39 0.733333333 0.740362689 0.066666667 0.4 0.6 10 3 1 11 3L:9067843-9067899 8 8 3387 FBgn0035959 1732.163333 43.72333333 67.07666667 0.004618502 0.182968667 0.119266511 7 -3 2 0.01 dme-miR-277-3p 6mer3-8 TGCATT 3L 9067924 9067929 - 3L_9067924_9067929_- 1 1 1 0 CG4911 FBtr0345351 9067193 9070515 3L - 9067923 9067982 3'utr CG4911 FlyBase G35573.1 GTGACATGGGCGAGGAGGGTAGAAAATCCGAAAGACGATATGTATGACAGCCGTGCATTA 7 9067943 0.68548453 4 5 29 0.714285714 0.698970004 0.428571429 0 0 7 2 0 5 3L:9067923-9067982 6 CG4911 FBtr0345351 9067193 9070515 TGCATT 6mer3-8 dme-miR-277-3p 3L - 9067923 9067953 3'utr CG4911 FlyBase G26918.1 GAAAGACGATATGTATGACAGCCGTGCATTA 4 9067940 0.936030508 3 3 14 0.875 0.84509804 0.75 0.25 0.625 4 1 0 7 3L:9067923-9067953 6 2.5 3388 FBgn0035959 1732.163333 43.72333333 67.07666667 0.001443282 0.057177708 0.037270785 14 11 12.5 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG 3L 9068853 9068858 - 3L_9068853_9068858_- 1 1 1 0 CG4911 FBtr0345351 9067193 9070515 3L - 9068830 9068885 3'utr CG4911 FlyBase G35578.1 TTATGTAACCAGACCTGTTTGTATGTGGCTGTGCATTTAATTTAAGTCTAGTACGT 55 9068860 0.848040432 5 54 615 0.983050847 1.763427994 0.084745763 0.072727273 0.13559322 55 1 0 58 3L:9068830-9068885 6 CG4911 FBtr0345351 9067193 9070515 GCTGTG 6mer2-7 dme-miR-1008-3p 3L - 9068813 9068882 3'utr CG4911 FlyBase G26920.1 TGTAACCAGACCTGTTTGTATGTGGCTGTGCATTTAATTTAAGTCTAGTACGTACCAAACACAACAACCA 43 9068860 0.991976752 6 43 474 1 1.77815125 0.066666667 0.325581395 0.516666667 43 0 0 60 3L:9068813-9068882 6 46.5 3389 FBgn0035959 1732.163333 43.72333333 67.07666667 0.026845043 1.063505375 0.693236595 2 2 2 0.01 dme-miR-92b-3p 7mer-A1 TGCAATA 3L 9069042 9069048 - 3L_9069042_9069048_- 0.782911824 0.782911824 0.782911824 0 CG4911 FBtr0345351 9067193 9070515 3L - 9069027 9069073 3'utr CG4911 FlyBase G35580.1 ATGCATGTAATCATTTTTTATGAACTGCAATAGCAAATATTATTTTT 5 9069043 0.978364312 4 5 42 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3L:9069027-9069073 7 CG4911 FBtr0345351 9067193 9070515 TGCAATA 7mer-A1 dme-miR-92b-3p 3L - 9069037 9069082 3'utr CG4911 FlyBase G26921.1 ATGTAACCAATGCATGTAATCATTTTTTATGAACTGCAATAGCAAA 5 9069054 0.984929473 4 5 35 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3L:9069037-9069082 7 3 3390 FBgn0035959 1732.163333 43.72333333 67.07666667 0.001731938 0.06861325 0.044724942 -5 6 0.5 0.01 dme-bantam-3p 7mer-A1 GATCTCA 3L 9069143 9069149 - 3L_9069143_9069149_- 0.823349562 0.823349562 0.823349562 0 CG4911 FBtr0345351 9067193 9070515 3L - 9069108 9069178 3'utr CG4911 FlyBase G35581.1 GGGACAAGTAACAACCGCAAACAAAATGCGATCTCACAGATAACTCCTACAACTATCCAATCGACCATCTA 75 9069152 0.969327952 5 70 230 0.927710843 1.40936947 0.048192771 0.093333333 0.180722892 75 4 2 77 3L:9069108-9069178 7 CG4911 FBtr0345351 9067193 9070515 GATCTCA 7mer-A1 dme-bantam-3p 3L - 9069120 9069187 3'utr CG4911 FlyBase G26922.1 TTGGTTTCTGGGACAAGTAACAACCGCAAACAAAATGCGATCTCACAGATAACTCCTACAACTATCCA 51 9069152 0.951964142 5 44 173 0.817073171 1.826074803 0.048780488 0.450980392 0.658536585 51 15 0 67 3L:9069120-9069187 7 59.5 3391 FBgn0035959 1732.163333 43.72333333 67.07666667 0.034350109 1.360829458 0.887044675 3 3 3 0.01 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 9069239 9069246 - 3L_9069239_9069246_- 0.643565469 0.643565469 0.643565469 0 CG4911 FBtr0345351 9067193 9070515 3L - 9069205 9069269 3'utr CG4911 FlyBase G35582.1 AAACACAAAATCTATTGAAACAGAAGACTGAACGATAAAGATGGTGTTGACCTTGTTGTCAGAGC 61 9069255 0.713389076 9 53 226 0.861111111 1.792391689 0.041666667 0.163934426 0.291666667 61 10 0 62 3L:9069205-9069269 8 CG4911 FBtr0345351 9067193 9070515 AAGACTGA 8mer-A1 dme-miR-14-3p 3L - 9069212 9069273 3'utr CG4911 FlyBase G26923.1 AAACAAACACAAAATCTATTGAAACAGAAGACTGAACGATAAAGATGGTGTTGACCTTGTTG 48 9069255 0.774301356 7 42 168 0.886075949 1.544068044 0.012658228 0.416666667 0.64556962 48 8 1 70 3L:9069212-9069273 8 51 3392 FBgn0035959 1732.163333 43.72333333 67.07666667 0.029442951 1.16642525 0.760324007 9 9 9 0.01 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 3L 9069343 9069350 - 3L_9069343_9069350_- 0.674982063 0.674982063 0.674982063 0 CG4911 FBtr0345351 9067193 9070515 3L - 9069327 9069372 3'utr CG4911 FlyBase G35583.1 AACAGCAACAACAACAAAAATGGTACCTGAAGATCATGCCGAGCAT 23 9069352 0.935337378 2 19 70 0.833333333 1.301029996 0.041666667 0.043478261 0.083333333 23 4 0 20 3L:9069327-9069372 8 CG4911 FBtr0345351 9067193 9070515 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3L - 9069318 9069370 3'utr CG4911 FlyBase G26924.1 CAGCAACAACAACAAAAATGGTACCTGAAGATCATGCCGAGCATTTAGAGAAC 17 9069352 0.927031509 3 14 47 0.833333333 1.301029996 0 0.411764706 0.583333333 17 4 0 20 3L:9069318-9069370 8 19 3393 FBgn0035959 1732.163333 43.72333333 67.07666667 0.010968942 0.434550583 0.283257964 2 2 2 0.01 dme-miR-283-5p 8mer-A1 TGATATTA 3L 9069700 9069707 - 3L_9069700_9069707_- 0.592192292 0.592192292 0.592192292 0 CG4911 FBtr0345351|FBtr0331549|FBtr0076542 9067193|9069647|9069647 9070515|9070515|9070515 3L - 9069676 9069738 3'utr CG4911 FlyBase G35586.1 CGCTAAGCGCCGCCATTTGTGTAGTTTAAAGTGATATTACCAGCAACAGCAAAGCAAAATGTA 29 9069701 0.986657182 8 26 216 0.918918919 1.531478917 0.27027027 0.206896552 0.378378378 29 3 0 34 3L:9069676-9069738 8 CG4911 FBtr0076542|FBtr0345351|FBtr0331549 9069647|9067193|9069647 9070515|9070515|9070515 TGATATTA 8mer-A1 dme-miR-283-5p 3L - 9069681 9069746 3'utr CG4911 FlyBase G26926.1 TCCTCGTTCGCTAAGCGCCGCCATTTGTGTAGTTTAAAGTGATATTACCAGCAACAGCAAAGCAAA 18 9069713 0.982269566 6 17 127 0.956521739 1.342422681 0.52173913 0.222222222 0.391304348 18 1 0 22 3L:9069681-9069746 8 20 3394 FBgn0035959 1732.163333 43.72333333 67.07666667 0.011546255 0.457421667 0.298166277 -6 6 0 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 9069795 9069801 - 3L_9069795_9069801_- 0.801970437 0.801970437 0.801970437 0 CG4911 FBtr0345351|FBtr0345351|FBtr0345351|FBtr0331549|FBtr0331549|FBtr0331549|FBtr0076542|FBtr0076542|FBtr0076542 9067193|9067193|9067193|9069647|9069647|9069647|9069647|9069647|9069647 9070515|9070515|9070515|9070515|9070515|9070515|9070515|9070515|9070515 3L - 9069784 9069841 3'utr CG4911 FlyBase G35587.1 TTTGTAGTAGTGTGAATAAGTACAGAATCTGGCGCTCAATTGTGATAAACCAACAAAC 81 9069802 0.707621314 10 73 435 0.894736842 1.327358934 0.168421053 0.135802469 0.263157895 81 7 3 85 3L:9069784-9069841 7 CG4911 FBtr0076542|FBtr0076542|FBtr0076542|FBtr0345351|FBtr0345351|FBtr0345351|FBtr0331549|FBtr0331549|FBtr0331549 9069647|9069647|9069647|9067193|9067193|9067193|9069647|9069647|9069647 9070515|9070515|9070515|9070515|9070515|9070515|9070515|9070515|9070515 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 9069762 9069823 3'utr CG4911 FlyBase G26927.1 AGTACAGAATCTGGCGCTCAATTGTGATAAACCAACAAACAACAACATAAGCAAATGTAACA 57 9069802 0.973574064 5 51 308 0.898876404 1.301029996 0.191011236 0.421052632 0.629213483 57 6 3 80 3L:9069762-9069823 7 65 3395 FBgn0035959 1732.163333 43.72333333 67.07666667 0.03752533 1.486620416 0.969040402 1 1 1 0.01 dme-miR-33-5p 6mer2-7 AATGCA 3L 9070054 9070059 - 3L_9070054_9070059_- 0.985358932 0.999989006 0.992673969 0.010345043 CG4911 FBtr0345351|FBtr0331549|FBtr0076542 9067193|9069647|9069647 9070515|9070515|9070515 3L - 9070000 9070085 3'utr CG4911 FlyBase G35589.1 AAGCAACAACAACTGTGATTCAAGCGAATGCAGCAGATGCAAATGCAAGCCAGTGTGAAAGCAAATGCTATACCCAGCTCTCATAC 18 9070042 0.92110816 6 17 56 0.956521739 1.342422681 0.130434783 0.222222222 0.391304348 18 1 0 22 3L:9070000-9070085 6 CG4911 FBtr0076542|FBtr0345351|FBtr0331549 9069647|9067193|9069647 9070515|9070515|9070515 AATGCA 6mer2-7 dme-miR-33-5p 3L - 9070003 9070084 3'utr CG4911 FlyBase G26928.1 AGCAACAACAACTGTGATTCAAGCGAATGCAGCAGATGCAAATGCAAGCCAGTGTGAAAGCAAATGCTATACCCAGCTCTCA 11 9070057 0.99939385 5 9 31 0.8 0.77815125 0.066666667 0.363636364 0.533333333 11 2 1 12 3L:9070003-9070084 6 4.5 3396 FBgn0035959 1732.163333 43.72333333 67.07666667 0.002597907 0.102919875 0.067087412 -17 -2 -9.5 0.01 dme-miR-305-5p 8mer-A1 AGTACAAA 3L 9070214 9070221 - 3L_9070214_9070221_- 0.605654138 0.605654138 0.605654138 0 CG4911 FBtr0345351|FBtr0331549|FBtr0076542 9067193|9069647|9069647 9070515|9070515|9070515 3L - 9070152 9070253 3'utr CG4911 FlyBase G35591.1 GTAATCAAAATCGCGATTAGCCCTTGTTTATTAGTACAAAAGCGACAGATCAAGAGCGACAGGAATGTTAGGAGCAAAGCAAAAGACTTGAGCACTTCACAA 46 9070222 0.859118576 9 39 275 0.862745098 1.342422681 0.235294118 0.108695652 0.196078431 46 6 1 44 3L:9070152-9070253 8 CG4911 FBtr0076542|FBtr0345351|FBtr0331549 9069647|9067193|9069647 9070515|9070515|9070515 AGTACAAA 8mer-A1 dme-miR-305-5p 3L - 9070153 9070283 3'utr CG4911 FlyBase G26929.1 ATGTTAAATTTTCCTAATTTCTTAGCCTTTGTAATCAAAATCGCGATTAGCCCTTGTTTATTAGTACAAAAGCGACAGATCAAGAGCGACAGGAATGTTAGGAGCAAAGCAAAAGACTTGAGCACTTCACA 26 9070222 0.980559667 11 21 160 0.761904762 1.505149978 0.261904762 0.423076923 0.642857143 26 10 0 32 3L:9070153-9070283 8 24.5 3397 FBgn0035959 1732.163333 43.72333333 67.07666667 0.014144163 0.560341542 0.36525369 1 1 1 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 9097398 9097403 + 3L_9097398_9097403_+ 1 1 1 0 CG13315 FBtr0076530 9097219 9097494 3L + 9097360 9097419 3'utr CG13315 FlyBase G29047.2 AATCGAATCTAAACGAAGCTGGCGCTACGACTTTTCATGTACCTTGGCATTATATATATA 145 9097397 0.833298411 10 139 1317 0.956790123 1.713210443 0.055555556 0.110344828 0.203703704 145 5 2 155 3L:9097360-9097419 6 CG13315 FBtr0076530 9097219 9097494 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 9097360 9097418 3'utr CG13315 FlyBase G21986.1 AATCGAATCTAAACGAAGCTGGCGCTACGACTTTTCATGTACCTTGGCATTATATATAT 78 9097397 0.840911965 8 73 679 0.946153846 2.089905111 0.023076923 0.474358974 0.684615385 78 7 0 123 3L:9097360-9097418 6 103 3398 FBgn0040827 102.6933333 24.86 37.96 1.002986237 4.143201931 2.713382508 1 1 1 0.01 dme-miR-283-5p 8mer-A1 TGATATTA 3L 9348311 9348318 + 3L_9348311_9348318_+ 0.592192288 0.592192289 0.592192288 0 PGRP-LC FBtr0308349|FBtr0089492|FBtr0346814|FBtr0089491 9348174|9347217|9348174|9348174 9348336|9348336|9348336|9348336 3L + 9348291 9348330 3'utr PGRP-LC FlyBase G29076.1 ATTCGTTTAAAAAGAAAATGTGATATTAAATAAAACAAAA 80 9348316 0.667474309 7 73 446 0.914893617 1.33243846 0 0.1375 0.265957447 80 5 3 86 3L:9348291-9348330 8 PGRP-LC FBtr0089491|FBtr0346814|FBtr0089492|FBtr0308349 9348174|9348174|9347217|9348174 9348336|9348336|9348336|9348336 TGATATTA 8mer-A1 dme-miR-283-5p 3L + 9348291 9348332 3'utr PGRP-LC FlyBase G22004.1 ATTCGTTTAAAAAGAAAATGTGATATTAAATAAAACAAAATG 58 9348316 0.658098571 6 53 335 0.91954023 1.425968732 0.011494253 0.362068966 0.574712644 58 5 2 80 3L:9348291-9348332 8 68.5 3399 FBgn0035976 208.34 13.13 20.06 0.328789479 5.217060168 3.414755733 -5 -5 -5 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA 3L 9359565 9359570 + 3L_9359565_9359570_+ 1 1 1 0 CG32039 FBtr0345605|FBtr0076441 9359489|9359489 9359996|9359747 3L + 9359541 9359602 3'utr CG32039 FlyBase G29083.1 GTTCCCACATCTTTACTGACTTTTGTGCAAAGTTTTTGTACTACTCCGTATTTGTATTTGTA 34 9359563 0.740841541 8 33 377 0.973684211 1.568201724 0.184210526 0.117647059 0.210526316 34 1 0 37 3L:9359541-9359602 6 CG32039 FBtr0076441|FBtr0345605 9359489|9359489 9359747|9359996 GTGCAA 6mer3-8 dme-miR-92b-3p 3L + 9359534 9359603 3'utr CG32039 FlyBase G22012.1 CAAATTTGTTCCCACATCTTTACTGACTTTTGTGCAAAGTTTTTGTACTACTCCGTATTTGTATTTGTAT 23 9359563 0.991557721 6 23 252 1 1.505149978 0.125 0.304347826 0.5 23 0 0 32 3L:9359534-9359603 6 23 3400 FBgn0052039 133.9666667 27.61666667 42.45333333 0.171684499 0.832830416 0.541771357 2 2 2 0.01 dme-miR-2b-2-5p 7mer-A1 TGAAGAA 3L 9362932 9362938 - 3L_9362932_9362938_- 0.823349562 0.823349562 0.823349562 0 Klp67A FBtr0333886 9362634 9363301 3L - 9362896 9362961 3'utr Klp67A FlyBase G35625.1 CAATCGTGCTGCTTCGTTCCGCCTGAAGAAGTAGAAAACATGAACTCATTCAGTTAGTTTCAACTT 27 9362921 0.980590794 3 22 156 0.833333333 0.920818754 0.333333333 0.074074074 0.166666667 27 3 2 25 3L:9362896-9362961 7 Klp67A FBtr0333886 9362634 9363301 TGAAGAA 7mer-A1 dme-miR-2b-2-5p 3L - 9362828 9362942 3'utr Klp67A FlyBase G26946.1 CGCCTGAAGAAGTAGAAAACATGAACTCATTCAGTTAGTTTCAACTTGTGTTTGCCTTGAAGTAACAACTATTCCGCCAGGACCGAGACAGATTCATGTTCAAATTAACCATAGC 25 9362921 0.981593846 5 23 162 0.918918919 1.531478917 0.216216216 0.32 0.540540541 25 3 0 34 3L:9362828-9362942 7 12 3401 FBgn0004379 703.3133333 29.24333333 44.67666667 0.017062097 0.410349937 0.268596583 -17 -17 -17 0.01 dme-miR-184-5p 8mer-A1 TGATAAGA 3L 9369137 9369144 + 3L_9369137_9369144_+ 0.593375331 0.548778919 0.571077125 0.031534417 CG4452 FBtr0333883 9369104 9370300 3L + 9369093 9369171 stop_codon CG4452 FlyBase G29090.1 AATAGCGGCGTGAATGCCGTAAGCGGAGCTGGATTGGATCTACCTGATAAGATCTCACGCGGAAATGGTGGTAATGGGA 19 9369139 0.974562639 6 16 96 0.826086957 0.977723605 0.52173913 0.210526316 0.347826087 19 3 1 19 3L:9369093-9369171 8 CG4452 FBtr0333883 9369104 9370300 TGATAAGA 8mer-A1 dme-miR-184-5p 3L + 9369116 9369178 3'utr CG4452 FlyBase G22019.1 CGGAGCTGGATTGGATCTACCTGATAAGATCTCACGCGGAAATGGTGGTAATGGGACCATTGC 15 9369139 0.925827438 9 14 78 0.958333333 1.361727836 0.25 0.4 0.625 15 1 0 23 3L:9369116-9369178 8 11.5 3402 FBgn0035981 206.7633333 15.1 22.93333333 0.055619146 0.761589404 0.501453488 -2 -2 -2 0.01 dme-miR-995-5p 6mer3-8 AATTCG 3L 9369207 9369212 + 3L_9369207_9369212_+ 1 1 1 0 CG4452 FBtr0333883 9369104 9370300 3L + 9369179 9369300 3'utr CG4452 FlyBase G29091.1 AGCGCCTGCTGCCATCACCGTGGACACCAATTCGTCTGATCATGTGGTTGCTATAACATACCTAAAGGAACGCATCGCCAGTCTGGAGAAGCGCCTGAATCAAAAAGACAAAGAGCTGCTCG 151 9369223 0.982840804 13 145 1099 0.956989247 1.773298748 0.032258065 0.185430464 0.338709677 151 6 2 178 3L:9369179-9369300 6 CG4452 FBtr0333883 9369104 9370300 AATTCG 6mer3-8 dme-miR-995-5p 3L + 9369179 9369250 3'utr CG4452 FlyBase G22020.1 AGCGCCTGCTGCCATCACCGTGGACACCAATTCGTCTGATCATGTGGTTGCTATAACATACCTAAAGGAACG 68 9369223 0.800855143 11 66 489 0.989361702 1.968482949 0.106382979 0.338235294 0.521276596 68 1 0 93 3L:9369179-9369250 6 53.5 3403 FBgn0035981 206.7633333 15.1 22.93333333 0.25874994 3.543046358 2.332848837 -16 -16 -16 0.01 dme-miR-995-5p 6mer2-7 ATTCGG 3L 9374897 9374902 + 3L_9374897_9374902_+ 0.999794109 0.99268999 0.996242049 0.005023357 Hsp67Bb FBtr0100655 9373443 9374964 3L + 9374874 9374920 3'utr Hsp67Bb FlyBase G29098.1 AAGTTAATTTTAAAACAATTGTGATTCGGTAGCCCGCAAGCCCAATA 140 9374892 0.700553342 9 128 965 0.910828025 1.456366033 0.286624204 0.107142857 0.203821656 140 10 4 143 3L:9374874-9374920 6 Hsp67Bb FBtr0100655 9373443 9374964 ATTCGG 6mer2-7 dme-miR-995-5p 3L + 9374874 9374917 3'utr Hsp67Bb FlyBase G22024.1 AAGTTAATTTTAAAACAATTGTGATTCGGTAGCCCGCAAGCCCA 61 9374892 0.944811498 9 53 418 0.906976744 1.414973348 0.162790698 0.327868852 0.523255814 61 6 2 78 3L:9374874-9374917 6 100.5 3404 FBgn0001228 1.666666667 0.403333333 0.57 60.3 249.1735537 176.3157895 5 5 5 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT 3L 9382624 9382629 + 3L_9382624_9382629_+ 1 1 1 0 Hsp23 FBtr0076453|FBtr0309504 9382557|9382557 9382730|9382765 3L + 9382573 9382680 3'utr Hsp23 FlyBase G29101.1 GAGATGCCCTGCATTATTTAACCATTATCAAAGTCATACATCTGTTTTATAAGCTGTAGTTATCCAAGGACACTTCACTCATACACAATAGCCATTAAGGGTGTCCTG 53 9382612 0.993966182 12 38 494 0.738461538 1.079181246 0.2 0.188679245 0.338461538 53 14 3 48 3L:9382573-9382680 6 Hsp23 FBtr0309504|FBtr0076453 9382557|9382557 9382765|9382730 AGCTGT 6mer3-8 dme-miR-1008-3p 3L + 9382589 9382660 3'utr Hsp23 FlyBase G22027.1 TTTAACCATTATCAAAGTCATACATCTGTTTTATAAGCTGTAGTTATCCAAGGACACTTCACTCATACACAA 25 9382653 0.993106824 8 19 229 0.8 1.146128036 0.171428571 0.32 0.514285714 25 6 1 28 3L:9382589-9382660 6 24 3405 FBgn0001224 279.6666667 39.84 60.63333333 0.085816448 0.602409639 0.39582188 12 -29 -8.5 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3L 9384998 9385003 + 3L_9384998_9385003_+ 0.999998698 1 0.999999349 9.19E-07 Hsp27 FBtr0076454|FBtr0346541 9384826|9384826 9385282|9385694 3L + 9384974 9385046 3'utr Hsp27 FlyBase G29105.1 GTTGCCGCGCTGCTCGGAGAGAGCAAGACTAAAAAGGACACACCACAACACACCCAATGTATTACATTCACAC 10 9384985 0.894294243 3 8 27 0.727272727 0.602059991 0.090909091 0.1 0.181818182 10 2 1 8 3L:9384974-9385046 6 Hsp27 FBtr0346541|FBtr0076454 9384826|9384826 9385694|9385282 AAGACT 6mer3-8 dme-miR-14-3p 3L + 9384976 9385007 3'utr Hsp27 FlyBase G22030.1 TGCCGCGCTGCTCGGAGAGAGCAAGACTAAAA 4 9384985 0.717274014 2 4 10 1 0.698970004 0 0.25 0.4 4 0 0 5 3L:9384976-9385007 6 5.5 3406 FBgn0001226 194.4066667 19.60666667 30.18666667 0.028291211 0.280516831 0.182199647 13 13 13 0.01 dme-miR-308-3p 8mer-m1 CTGTGATT 3L 9387233 9387240 - 3L_9387233_9387240_- 0.385560641 0.385560641 0.385560641 0 CG4080 FBtr0309506 9386825 9387784 3L - 9387145 9387359 3'utr CG4080 FlyBase G35644.1 ACTAAGTTGTCCATGCCAAAAAGCCCAAAAACCAACCAGAGACGGTAATTATTTAGTCCATGTGTAGGATGTGTTTTGTTTCTTAACTTCTAAGTCAAATGAAATTTTAAAAAATTGATCTGTGATTAAGCGTCATTGAATATACATACATAACGTGCATAAATGCAAGCAAAAACATATTGACAGCAGCCGCAGCCGTAGAAAATGCAGAAAAA 153 9387241 0.979650894 20 149 1026 0.973958333 2.271841607 0.052083333 0.215686275 0.375 153 5 0 187 3L:9387145-9387359 8 CG4080 FBtr0309506 9386825 9387784 CTGTGATT 8mer-m1 dme-miR-308-3p 3L - 9387185 9387255 3'utr CG4080 FlyBase G26958.1 TTTTAAAAAATTGATCTGTGATTAAGCGTCATTGAATATACATACATAACGTGCATAAATGCAAGCAAAAA 70 9387241 0.840737221 10 68 476 0.981481481 1.72427587 0.018518519 0.4 0.611111111 70 1 1 106 3L:9387185-9387255 8 84.5 3407 FBgn0035983 376.7 13.10666667 19.99333333 0.224316432 6.447100712 4.226408803 1 1 1 0.01 dme-bantam-3p 6mer3-8 TGATCT 3L 9387739 9387744 - 3L_9387739_9387744_- 1 1 1 0 CG4080 FBtr0309506 9386825 9387784 3L - 9387660 9387784 3'utr CG4080 FlyBase G35646.1 AATGGAGTATCCTGCCCAACTGATCTGATGTGATCCACTATGATCTGCGCGCTCTTTCTCCCCCCAATAAGCTCTGCTCTCTCAAGTATTCACCGCTGGTCGACGGAGACCCCGAGATCCACATA 95 9387726 0.980145537 20 89 626 0.948717949 1.744292983 0.213675214 0.178947368 0.333333333 95 5 1 111 3L:9387660-9387784 6 CG4080 FBtr0076494|FBtr0309506 9387507|9386825 9387784|9387784 TGATCT 6mer3-8 dme-bantam-3p 3L - 9387670 9387788 stop_codon CG4080 FlyBase G26961.1 GTGAAATGGAGTATCCTGCCCAACTGATCTGATGTGATCCACTATGATCTGCGCGCTCTTTCTCCCCCCAATAAGCTCTGCTCTCTCAAGTATTCACCGCTGGTCGACGGAGACCCCGA 76 9387727 0.977708638 15 70 489 0.922330097 1.67669361 0.174757282 0.289473684 0.475728155 76 7 1 95 3L:9387670-9387788 6 42.5 3408 FBgn0035983 376.7 13.10666667 19.99333333 0.112821874 3.242624619 2.12570857 -18 -17 -17.5 0.01 dme-bantam-3p 7mer-m8 TGATCTC 3L 9407489 9407495 - 3L_9407489_9407495_- 0.661615243 0.661615243 0.661615243 0 CG4022 FBtr0309089 9406177 9408212 3L - 9407467 9407567 3'utr CG4022 FlyBase G35671.2 ATATCCATATCCATATCCGTGCAAAAGTATTAAGAAACTTCGCAGATCCAAGAACCCTAACCCTGGATCGATTGATCTCCACGCTTTGAAGTTGAGGGGCA 285 9407496 0.984614598 8 271 2191 0.956140351 2.037426498 0.064327485 0.161403509 0.301169591 285 13 2 327 3L:9407467-9407567 7 CG4022 FBtr0309089 9406177 9408212 TGATCTC 7mer-m8 dme-bantam-3p 3L - 9407459 9407550 3'utr CG4022 FlyBase G26976.1 CGTGCAAAAGTATTAAGAAACTTCGCAGATCCAAGAACCCTAACCCTGGATCGATTGATCTCCACGCTTTGAAGTTGAGGGGCAGTGAAAAC 155 9407496 0.976225355 11 146 1116 0.931623932 2.338456494 0.068376068 0.367741935 0.581196581 155 16 0 218 3L:9407459-9407550 7 199.5 3409 FBgn0035986 448.2433333 14.32333333 21.92 0.445070758 13.92832209 9.101277372 1 1 1 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3L 9412348 9412354 + 3L_9412348_9412354_+ 0.661615511 0.661615511 0.661615511 0 CG3689 FBtr0076456 9412188 9413637 3L + 9412306 9412378 3'utr CG3689 FlyBase G29117.1 ATCGCAAAAGCTGGCGCAGGCGACTCCTTAGTTAGTTTTGATTCTAGTCCAATTGTACAACATGTCGAAAATC 82 9412347 0.975292757 6 79 809 0.972222222 2.021189299 0.5 0.256097561 0.435185185 82 3 0 105 3L:9412306-9412378 7 CG3689 FBtr0076456 9412188 9413637 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 9412317 9412421 3'utr CG3689 FlyBase G22034.1 TGGCGCAGGCGACTCCTTAGTTAGTTTTGATTCTAGTCCAATTGTACAACATGTCGAAAATCAAATTCAAATTGTATTTTTGCTCAGGACTGAGTGTTGGCATAT 68 9412347 0.970091217 10 65 662 0.979591837 1.982271233 0.428571429 0.382352941 0.571428571 68 2 0 96 3L:9412317-9412421 7 68.5 3410 FBgn0035987 792 73.75 112.5233333 0.086489899 0.928813559 0.608762627 1 1 1 0.01 dme-miR-1003-3p 7mer-A1 TGTGAGA 3L 9412500 9412506 + 3L_9412500_9412506_+ 0.823311086 0.82334918 0.823330133 2.69E-05 CG3689 FBtr0076456 9412188 9413637 3L + 9412447 9412523 3'utr CG3689 FlyBase G29119.1 TCGAAATTCAAAGATTGTTCTTGTACTTAATTTTGTAAATATGTCGACATACTTGTGAGACTGAGCGCAGCAATGTT 85 9412501 0.965089625 8 80 584 0.946808511 1.949390007 0.308510638 0.094117647 0.180851064 85 5 0 89 3L:9412447-9412523 7 CG3689 FBtr0076456 9412188 9413637 TGTGAGA 7mer-A1 dme-miR-1003-3p 3L + 9412449 9412533 3'utr CG3689 FlyBase G22035.1 GAAATTCAAAGATTGTTCTTGTACTTAATTTTGTAAATATGTCGACATACTTGTGAGACTGAGCGCAGCAATGTTATCCTTCTAT 57 9412501 0.872860357 8 49 409 0.821917808 1.301029996 0.328767123 0.228070175 0.397260274 57 11 2 60 3L:9412449-9412533 7 58.5 3411 FBgn0035987 792 73.75 112.5233333 0.073863636 0.793220339 0.519892171 -1 -1 -1 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3L 9414949 9414955 - 3L_9414949_9414955_- 0.521223855 0.521223855 0.521223855 0 CG3967 FBtr0076480|FBtr0331584 9414836|9414836 9415286|9415286 3L - 9414915 9414974 3'utr CG3967 FlyBase G35677.1 ACGAAAATACCTGACAAATTGTGATTACAACATATATAACTTATCATTTAACATTTAACT 35 9414956 0.975144011 4 34 216 0.97826087 1.653212514 0.065217391 0.228571429 0.413043478 35 1 0 45 3L:9414915-9414974 7 CG3967 FBtr0076480|FBtr0331584 9414836|9414836 9415286|9415286 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 9414934 9414973 3'utr CG3967 FlyBase G26981.1 CGAAAATACCTGACAAATTGTGATTACAACATATATAACT 23 9414956 0.681656845 3 23 126 1 1.491361694 0.032258065 0.347826087 0.516129032 23 0 0 31 3L:9414934-9414973 7 28.5 3412 FBgn0035989 353.1 23.02 35.35666667 0.080713679 1.238053866 0.806071462 1 1 1 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 3L 9415180 9415186 - 3L_9415180_9415186_- 0.782911824 0.782911824 0.782911824 0 CG3967 FBtr0076480|FBtr0331584 9414836|9414836 9415286|9415286 3L - 9415175 9415225 3'utr CG3967 FlyBase G35678.1 CGACACTAGATAAACTGATATATCAACTAAATAACCATTGTACAAAGCTTT 8 9415188 0.971316898 4 7 43 0.833333333 1 0 0.375 0.583333333 8 2 0 10 3L:9415175-9415225 7 CG3967 FBtr0076480|FBtr0331584 9414836|9414836 9415286|9415286 GTACAAA 7mer-A1 dme-miR-305-5p 3L - 9415148 9415197 3'utr CG3967 FlyBase G26982.1 AAATAACCATTGTACAAAGCTTTGATTTTAGCCAATTATTTATATTTTCG 11 9415188 0.973106305 3 11 73 1 1.204119983 0 0.272727273 0.5 11 0 0 16 3L:9415148-9415197 7 8.5 3413 FBgn0035989 353.1 23.02 35.35666667 0.024072501 0.369244136 0.240407278 2 2 2 0.01 dme-miR-8-3p 6mer2-7 AGTATT 3L 9424401 9424406 + 3L_9424401_9424406_+ 1 1 1 0 aay FBtr0076457 9424361 9424781 3L + 9424371 9424438 3'utr aay FlyBase G29129.1 TACGTAAGGCGGTGGGGGAGTGGCGAATTTAGTATTTGAAATCAACGTGTTATAGCTCGTAGTGATGC 14 9424407 0.973040404 7 12 101 0.9375 0.875061263 0.25 0.142857143 0.25 14 0 1 15 3L:9424371-9424438 6 aay FBtr0076457 9424361 9424781 AGTATT 6mer2-7 dme-miR-8-3p 3L + 9424370 9424454 3'utr aay FlyBase G22041.1 ATACGTAAGGCGGTGGGGGAGTGGCGAATTTAGTATTTGAAATCAACGTGTTATAGCTCGTAGTGATGCACATGTTTATGCCCAA 16 9424409 0.979943091 7 14 102 0.869565217 1.301029996 0.52173913 0.375 0.565217391 16 3 0 20 3L:9424370-9424454 6 7.5 3414 FBgn0023129 178.6666667 14.14 21.50666667 0.041977612 0.530410184 0.348729076 -6 -8 -7 0.01 dme-miR-8-3p 6mer2-7 AGTATT 3L 9438031 9438036 + 3L_9438031_9438036_+ 1 1 1 0 MTF-1 FBtr0113323|FBtr0344237|FBtr0113324|FBtr0113322|FBtr0076459|FBtr0076460 9437921|9437921|9437921|9437921|9437921|9437921 9438711|9438711|9438704|9438711|9438711|9438711 3L + 9438011 9438045 3'utr MTF-1 FlyBase G29148.1 CTGGTATTGGGCCTGTAAAAAGTATTTTTCCCATT 10 9438037 0.685568208 3 10 94 1 1.113943352 0 0.2 0.384615385 10 0 0 13 3L:9438011-9438045 6 MTF-1 FBtr0076460|FBtr0076459|FBtr0113322|FBtr0113324|FBtr0344237|FBtr0113323 9437921|9437921|9437921|9437921|9437921|9437921 9438711|9438711|9438711|9438704|9438711|9438711 AGTATT 6mer2-7 dme-miR-8-3p 3L + 9437999 9438045 3'utr MTF-1 FlyBase G22057.1 AGAAATTTGAAACTGGTATTGGGCCTGTAAAAAGTATTTTTCCCATT 12 9438037 0.981729851 3 12 99 1 1.230448921 0 0.166666667 0.411764706 12 0 0 17 3L:9437999-9438045 6 10 3415 FBgn0040305 420.6966667 14.72 22.57 0.023770096 0.679347826 0.443066017 -6 -6 -6 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 9438111 9438116 + 3L_9438111_9438116_+ 0.730949445 0.730949445 0.730949445 0 MTF-1 FBtr0113323|FBtr0113323|FBtr0113323|FBtr0344237|FBtr0344237|FBtr0344237|FBtr0113324|FBtr0113324|FBtr0113324|FBtr0113322|FBtr0113322|FBtr0113322|FBtr0076459|FBtr0076459|FBtr0076459|FBtr0076460|FBtr0076460|FBtr0076460 9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921 9438711|9438711|9438711|9438711|9438711|9438711|9438704|9438704|9438704|9438711|9438711|9438711|9438711|9438711|9438711|9438711|9438711|9438711 3L + 9438067 9438156 3'utr MTF-1 FlyBase G29149.1 ACAAAAAATATCAAAGTGCATTTAAGTGAAACGATTCAATCATATGTGATCCCAGCGGAGGCTGGCCGCGCTATCCCAAAACCTACTATA 83 9438109 0.876780308 15 61 459 0.739130435 1.355387658 0.195652174 0.096385542 0.184782609 83 22 2 68 3L:9438067-9438156 6 MTF-1 FBtr0076460|FBtr0076460|FBtr0076460|FBtr0076459|FBtr0076459|FBtr0076459|FBtr0113322|FBtr0113322|FBtr0113322|FBtr0113324|FBtr0113324|FBtr0113324|FBtr0344237|FBtr0344237|FBtr0344237|FBtr0113323|FBtr0113323|FBtr0113323 9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921 9438711|9438711|9438711|9438711|9438711|9438711|9438711|9438711|9438711|9438704|9438704|9438704|9438711|9438711|9438711|9438711|9438711|9438711 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 9438070 9438155 3'utr MTF-1 FlyBase G22058.1 AAAAATATCAAAGTGCATTTAAGTGAAACGATTCAATCATATGTGATCCCAGCGGAGGCTGGCCGCGCTATCCCAAAACCTACTAT 64 9438110 0.785474249 13 44 323 0.673076923 1.544068044 0.240384615 0.40625 0.634615385 64 33 1 70 3L:9438070-9438155 6 62 3416 FBgn0040305 420.6966667 14.72 22.57 0.147374593 4.211956522 2.747009304 2 1 1.5 0.01 dme-miR-965-3p 6mer2-7 ACGCTT 3L 9438599 9438604 + 3L_9438599_9438604_+ 1 1 1 0 MTF-1 FBtr0113323|FBtr0344237|FBtr0113324|FBtr0113322|FBtr0076459|FBtr0076460 9437921|9437921|9437921|9437921|9437921|9437921 9438711|9438711|9438704|9438711|9438711|9438711 3L + 9438581 9438631 3'utr MTF-1 FlyBase G29151.1 TTTTGTATGGAGTTTATGACGCTTTATATCATGCCAAATATGAACAGAAAC 29 9438612 0.854183167 5 24 228 0.794117647 1.431363764 0.147058824 0.137931034 0.264705882 29 7 0 27 3L:9438581-9438631 6 MTF-1 FBtr0076460|FBtr0076459|FBtr0113322|FBtr0113324|FBtr0344237|FBtr0113323 9437921|9437921|9437921|9437921|9437921|9437921 9438711|9438711|9438711|9438704|9438711|9438711 ACGCTT 6mer2-7 dme-miR-965-3p 3L + 9438587 9438640 3'utr MTF-1 FlyBase G22060.1 ATGGAGTTTATGACGCTTTATATCATGCCAAATATGAACAGAAACATATTTTCT 23 9438612 0.980032312 6 23 160 1 1.51851394 0.121212121 0.434782609 0.606060606 23 0 0 33 3L:9438587-9438640 6 22.5 3417 FBgn0040305 420.6966667 14.72 22.57 0.053482715 1.528532609 0.996898538 -13 -13 -13 0.01 dme-miR-980-5p 7mer-A1 AAAAACA 3L 9450604 9450610 + 3L_9450604_9450610_+ 0.782911824 0.782902693 0.782907259 6.43E-06 CG3529 FBtr0331582|FBtr0076461|FBtr0331583 9450428|9450428|9450428 9450785|9450785|9450785 3L + 9450588 9450634 3'utr CG3529 FlyBase G29162.1 ATTGATTATATTCCAAAAAAACAAGCGATCTTTTGTTGGTCTAATTG 17 9450621 0.718026049 6 16 101 0.941176471 1.204119983 0.352941176 0 0 17 1 0 16 3L:9450588-9450634 7 CG3529 FBtr0331583|FBtr0331582|FBtr0076461 9450428|9450428|9450428 9450785|9450785|9450785 AAAAACA 7mer-A1 dme-miR-980-5p 3L + 9450590 9450640 3'utr CG3529 FlyBase G22067.1 TGATTATATTCCAAAAAAACAAGCGATCTTTTGTTGGTCTAATTGTAAGCC 14 9450620 0.98050944 7 12 86 1 1.255272505 0.222222222 0.285714286 0.444444444 14 0 0 18 3L:9450590-9450640 7 13.5 3418 FBgn0035995 382.66 21.89333333 33.38 0.03527936 0.616626066 0.404433793 -17 -16 -16.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 9452519 9452524 + 3L_9452519_9452524_+ 1 1 1 0 ghi FBtr0076462 9452442 9452790 3L + 9452451 9452543 3'utr ghi FlyBase G29163.1 ATCAGACCATGCCCAGACCAATCGTGTGTACTGTTCTCCGTTCCAATATCCAAAATAGCCGCGTATCTGTACCTCGCCGCGATGCTTTATCTA 78 9452518 0.974159938 8 74 454 0.96 1.681241237 0.25 0.230769231 0.4 78 3 1 96 3L:9452451-9452543 6 ghi FBtr0076462 9452442 9452790 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 9452502 9452542 3'utr ghi FlyBase G22069.1 AAAATAGCCGCGTATCTGTACCTCGCCGCGATGCTTTATCT 56 9452518 0.686048634 6 55 295 0.987654321 1.903089987 0.296296296 0.357142857 0.555555556 56 1 0 80 3L:9452502-9452542 6 60 3419 FBgn0266124 200.3333333 37.04333333 56.53333333 0.299500832 1.619724647 1.061320755 1 1 1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 9452758 9452763 + 3L_9452758_9452763_+ 0.991326631 0.999998558 0.995662594 0.00613203 ghi FBtr0076462|FBtr0076462|FBtr0076462 9452442|9452442|9452442 9452790|9452790|9452790 3L + 9452731 9452778 3'utr ghi FlyBase G29166.1 AATAAATCTAACGCTTACACAATCGCACTGTGAAATAGTTAAAAAAAG 17 9452766 0.711981419 5 14 86 0.884615385 1.361727836 0.192307692 0.352941176 0.576923077 17 3 0 23 3L:9452731-9452778 6 ghi FBtr0076462|FBtr0076462|FBtr0076462 9452442|9452442|9452442 9452790|9452790|9452790 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 9452637 9452774 3'utr ghi FlyBase G22071.1 ATCTGAAGTGGACAACACCCGGCGACTGTCCATCAATAGCTGCCTCACCGTTTAATGTAGTTATCTAGCAGTAGTTACAAGTTTAAAGTCAGTTAATAAATCTAACGCTTACACAATCGCACTGTGAAATAGTTAAAA 22 9452766 0.93214717 12 19 129 0.909090909 1.477121255 0.121212121 0.409090909 0.606060606 22 3 0 30 3L:9452637-9452774 6 12 3420 FBgn0266124 200.3333333 37.04333333 56.53333333 0.059900166 0.323944929 0.212264151 -8 -8 -8 0.01 dme-bantam-3p 6mer3-8 TGATCT 3L 9453120 9453125 - 3L_9453120_9453125_- 1 1 1 0 phol FBtr0076475|FBtr0345600 9453046|9452801 9453529|9453529 3L - 9453086 9453238 3'utr phol FlyBase G35697.1 AGTTCTAAGAGTTTAGCTTGTACCGTAGGCTAAGTGAGTCCCCCCGCAAAACCAAAACTGAACCGTAATCCCCGAAGAACTCAGCCAAACTGTCACCTTAAAAAGCCCCAATTTGATCTGATACTAATCGTGTGCGATCTTCGCTCGAATAAC 163 9453126 0.970284628 14 157 899 0.971014493 1.826074803 0.004830918 0.226993865 0.391304348 163 4 2 201 3L:9453086-9453238 6 phol FBtr0076475|FBtr0345600 9453046|9452801 9453529|9453529 TGATCT 6mer3-8 dme-bantam-3p 3L - 9453103 9453143 3'utr phol FlyBase G26995.1 CCTTAAAAAGCCCCAATTTGATCTGATACTAATCGTGTGCG 100 9453126 0.961073316 6 98 546 0.980645161 2.181843588 0.012903226 0.38 0.6 100 3 0 152 3L:9453103-9453143 6 121.5 3421 FBgn0035997 881.8933333 31.6 48.47 0.137771764 3.844936709 2.506705178 1 1 1 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA 3L 9453289 9453294 - 3L_9453289_9453294_- 1 1 1 0 phol FBtr0076475|FBtr0345600 9453046|9452801 9453529|9453529 3L - 9453266 9453314 3'utr phol FlyBase G35698.1 TCTAACAAAATAGGATTGCAGTGCAAAAGGAAGTTAGATGGTAGCCATT 12 9453298 0.943150311 4 11 46 1 1.079181246 0 0 0 12 0 0 12 3L:9453266-9453314 6 phol FBtr0076475|FBtr0345600 9453046|9452801 9453529|9453529 GTGCAA 6mer3-8 dme-miR-92b-3p 3L - 9453266 9453315 3'utr phol FlyBase G26997.1 CTCTAACAAAATAGGATTGCAGTGCAAAAGGAAGTTAGATGGTAGCCATT 11 9453298 0.895046873 3 9 48 1 1.079181246 0 0.090909091 0.166666667 11 0 0 12 3L:9453266-9453315 6 9 3422 FBgn0035997 881.8933333 31.6 48.47 0.010205316 0.284810127 0.185681865 4 4 4 0.01 dme-miR-304-5p 6mer3-8 TGAGAT 3L 9453488 9453493 - 3L_9453488_9453493_- 1 0.999999975 0.999999988 0 phol FBtr0076475|FBtr0345600 9453046|9452801 9453529|9453529 3L - 9453452 9453532 stop_codon phol FlyBase G35699.1 TAACTAGTAGTGCGCTTTAATGTGTGGCAGGTATTGGCATGAGATGGTTAAAATATTAAAGCTCCTTTGGCTCCGGAAGGC 18 9453510 0.765783877 8 15 132 0.833333333 1 0.166666667 0.277777778 0.458333333 18 3 1 20 3L:9453452-9453532 6 phol FBtr0076475|FBtr0345600 9453046|9452801 9453529|9453529 TGAGAT 6mer3-8 dme-miR-304-5p 3L - 9453486 9453529 3'utr phol FlyBase G26999.1 CTAGTAGTGCGCTTTAATGTGTGGCAGGTATTGGCATGAGATGG 5 9453510 0.986336216 4 5 34 1 0.84509804 0 0.2 0.428571429 5 0 0 7 3L:9453486-9453529 6 4.5 3423 FBgn0035997 881.8933333 31.6 48.47 0.005102658 0.142405063 0.092840933 17 17 17 0.01 dme-miR-283-5p 7mer-m1 GATATTT 3L 9475735 9475741 - 3L_9475735_9475741_- 0.765586663 0.765586663 0.765586663 0 Uch-L5 FBtr0076472 9475491 9475793 3L - 9475723 9475810 stop_codon Uch-L5 FlyBase G35723.1 AAAAGGATACCGACTAAGCATTTACAGTATATATTTAAAATTTCCCGTTGGACAATTTAAAATTGCTGCGATATTTGAAATAAAAGAA 74 9475748 0.909836493 12 70 665 0.941860465 1.908485019 0.069767442 0.162162162 0.279069767 74 5 0 81 3L:9475723-9475810 7 Uch-L5 FBtr0076472 9475491 9475793 GATATTT 7mer-m1 dme-miR-283-5p 3L - 9475721 9475795 stop_codon Uch-L5 FlyBase G27011.1 AAGCATTTACAGTATATATTTAAAATTTCCCGTTGGACAATTTAAAATTGCTGCGATATTTGAAATAAAAGAAAA 47 9475748 0.990377203 7 42 443 0.911764706 1.315270435 0.058823529 0.361702128 0.558823529 47 4 2 62 3L:9475721-9475795 7 55.5 3424 FBgn0011327 635.3333333 61.73666667 94.22333333 0.087355719 0.898979537 0.589026073 7 7 7 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3L 9485714 9485720 + 3L_9485714_9485720_+ 0.443131018 0.443131018 0.443131018 0 Jarid2 FBtr0076468 9485591 9486530 3L + 9485696 9485767 3'utr Jarid2 FlyBase G29207.1 AAGAAATGTGTATACCTATGTGATTCGCCATCGCTAGTGAGCAGATAATTGATAATTGGGTGAAATATAGAA 41 9485720 0.735398812 9 40 294 0.981481481 1.72427587 0.148148148 0.219512195 0.407407407 41 1 0 53 3L:9485696-9485767 7 Jarid2 FBtr0076468 9485591 9486530 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 9485700 9485740 3'utr Jarid2 FlyBase G22094.1 AATGTGTATACCTATGTGATTCGCCATCGCTAGTGAGCAGA 25 9485719 0.861979896 6 24 168 0.96875 1.491361694 0.1875 0.2 0.375 25 1 0 31 3L:9485700-9485740 7 29.5 3425 FBgn0036004 1195.756667 17.17 26.52666667 0.024670571 1.718112988 1.112088464 -6 -5 -5.5 0.01 dme-miR-33-5p 7mer-A1 AATGCAA 3L 9485810 9485816 + 3L_9485810_9485816_+ 0.777042882 0.782911824 0.779977353 0.004149939 Jarid2 FBtr0076468 9485591 9486530 3L + 9485794 9485868 3'utr Jarid2 FlyBase G29208.1 ACAAAACACACATATTAATGCAACGTTTATCTCCCAGTTGACTAACTGACACTATTACTAACTGTAAGATAAGAG 16 9485831 0.962604106 8 15 102 0.954545455 1.021189299 0.318181818 0.3125 0.5 16 0 1 21 3L:9485794-9485868 7 Jarid2 FBtr0076468 9485591 9486530 AATGCAA 7mer-A1 dme-miR-33-5p 3L + 9485760 9485853 3'utr Jarid2 FlyBase G22095.1 ATATAGAAATGTCTACGAGTTAATCCATGGACACACAAAACACACATATTAATGCAACGTTTATCTCCCAGTTGACTAACTGACACTATTACTA 19 9485808 0.995888613 7 17 109 0.913043478 1.021189299 0 0.210526316 0.347826087 19 1 1 21 3L:9485760-9485853 7 5 3426 FBgn0036004 1195.756667 17.17 26.52666667 0.004181453 0.291205591 0.18848957 -21 2 -9.5 0.01 dme-miR-1012-3p 8mer-A1 TTGACTAA 3L 9485831 9485838 + 3L_9485831_9485838_+ 0.627007342 0.627007348 0.627007345 0 Jarid2 FBtr0076468 9485591 9486530 3L + 9485794 9485868 3'utr Jarid2 FlyBase G29208.1 ACAAAACACACATATTAATGCAACGTTTATCTCCCAGTTGACTAACTGACACTATTACTAACTGTAAGATAAGAG 16 9485831 0.962604106 8 15 102 0.954545455 1.021189299 0.318181818 0.3125 0.5 16 0 1 21 3L:9485794-9485868 8 Jarid2 FBtr0076468 9485591 9486530 TTGACTAA 8mer-A1 dme-miR-1012-3p 3L + 9485760 9485853 3'utr Jarid2 FlyBase G22095.1 ATATAGAAATGTCTACGAGTTAATCCATGGACACACAAAACACACATATTAATGCAACGTTTATCTCCCAGTTGACTAACTGACACTATTACTA 19 9485808 0.995888613 7 17 109 0.913043478 1.021189299 0 0.210526316 0.347826087 19 1 1 21 3L:9485760-9485853 8 7 3427 FBgn0036004 1195.756667 17.17 26.52666667 0.005854034 0.407687828 0.263885398 0 23 11.5 0.01 dme-miR-33-5p 6mer3-8 CAATGC 3L 9485916 9485921 + 3L_9485916_9485921_+ 1 1 1 0 Jarid2 FBtr0076468 9485591 9486530 3L + 9485870 9485941 3'utr Jarid2 FlyBase G29209.1 GTAGGATCGGATATAGAGAGATGTAACTGTTCATATTTCAACGTGGCAATGCTTTCAATTTTGACTAGTTTA 25 9485899 0.742998261 6 25 190 1 1.462397998 0.137931034 0.16 0.275862069 25 0 0 29 3L:9485870-9485941 6 Jarid2 FBtr0076468 9485591 9486530 CAATGC 6mer3-8 dme-miR-33-5p 3L + 9485872 9485935 3'utr Jarid2 FlyBase G22096.1 AGGATCGGATATAGAGAGATGTAACTGTTCATATTTCAACGTGGCAATGCTTTCAATTTTGACT 17 9485891 0.825177105 6 17 127 1 1.414973348 0 0.352941176 0.576923077 17 0 0 26 3L:9485872-9485935 6 5 3428 FBgn0036004 1195.756667 17.17 26.52666667 0.004181453 0.291205591 0.18848957 17 25 21 0.01 dme-miR-79-3p 7mer-m8 TAGCTTT 3L 9486099 9486105 + 3L_9486099_9486105_+ 0.620204031 0.620204031 0.620204031 0 Jarid2 FBtr0076468 9485591 9486530 3L + 9486056 9486179 3'utr Jarid2 FlyBase G29210.1 TATTGTATATAGAGAGCCTTAGTGTATGTACGTACTACGTAGTTAGCTTTCGAATTAAGTCAAAGACCCTCAAAGAAACCATGCTAACGTGTTGCAATTTCTACTACCTTTTATACGCTAAGAT 26 9486076 0.988620572 15 24 224 0.965517241 1.447158031 0.103448276 0.076923077 0.172413793 26 1 0 28 3L:9486056-9486179 7 Jarid2 FBtr0076468 9485591 9486530 TAGCTTT 7mer-m8 dme-miR-79-3p 3L + 9486061 9486115 3'utr Jarid2 FlyBase G22097.1 TATATAGAGAGCCTTAGTGTATGTACGTACTACGTAGTTAGCTTTCGAATTAAGT 11 9486074 0.986847544 6 10 95 0.928571429 1.113943352 0.142857143 0.272727273 0.428571429 11 1 0 13 3L:9486061-9486115 7 8.5 3429 FBgn0036004 1195.756667 17.17 26.52666667 0.00710847 0.495049505 0.320432269 23 25 24 0.01 dme-miR-965-3p 6mer3-8 TACGCT 3L 9486169 9486174 + 3L_9486169_9486174_+ 1 1 1 0 Jarid2 FBtr0076468 9485591 9486530 3L + 9486056 9486179 3'utr Jarid2 FlyBase G29210.1 TATTGTATATAGAGAGCCTTAGTGTATGTACGTACTACGTAGTTAGCTTTCGAATTAAGTCAAAGACCCTCAAAGAAACCATGCTAACGTGTTGCAATTTCTACTACCTTTTATACGCTAAGAT 26 9486166 0.988620572 15 24 224 0.965517241 1.447158031 0.103448276 0.076923077 0.172413793 26 1 0 28 3L:9486056-9486179 6 Jarid2 FBtr0076468 9485591 9486530 TACGCT 6mer3-8 dme-miR-965-3p 3L + 9486144 9486170 3'utr Jarid2 FlyBase G22098.1 GTGTTGCAATTTCTACTACCTTTTATA 6 9486166 0.677102956 2 6 59 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3L:9486144-9486170 2 5.5 3430 FBgn0036004 1195.756667 17.17 26.52666667 0.004599598 0.32032615 0.207338527 3 3 3 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3L 9486489 9486495 - 3L_9486489_9486495_- 0.808818836 0.808818836 0.808818836 0 pall FBtr0076471|FBtr0076471 9486446|9486446 9486622|9486622 3L - 9486448 9486554 3'utr pall FlyBase G35731.1 AGCATTAATTAGGCAGTGCATCTTCGATATATCGCGTTAAGATTTATTGTTGCACTTGTTACTTAAATATTGTATTACTACTATATAAATACATTGAACATCTAGTG 12 9486498 0.99437503 7 11 120 0.916666667 0.740362689 0.083333333 0 0 12 0 1 11 3L:9486448-9486554 7 pall FBtr0076471|FBtr0076471 9486446|9486446 9486622|9486622 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3L - 9486465 9486509 3'utr pall FlyBase G27015.1 ATTGTTGCACTTGTTACTTAAATATTGTATTACTACTATATAAAT 8 9486485 0.787775698 5 8 95 1 1.041392685 0 0.375 0.545454545 8 0 0 11 3L:9486465-9486509 7 7.5 3431 FBgn0036005 105.5133333 10.81333333 16.61 0.071081064 0.693588163 0.45153522 3 -10 -3.5 0.01 dme-miR-932-5p 6mer2-7 GAATTG 3L 9494988 9494993 - 3L_9494988_9494993_- 1 0.99999889 0.999999445 7.78E-07 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 3L - 9494884 9495010 3'utr path FlyBase G35739.1 GAGTAATAAGTTACATTGAATTGCCCCGATATTCACTATGTGTAAACATACTTATTTTGTTGCATACATATTTTTGTATTTTAATTATAGCTATTAAAGAGAAATACTTAGCGAAACTATCAAGTAA 28 9494990 0.986577132 11 22 211 0.878787879 1.462397998 0.060606061 0.178571429 0.303030303 28 4 0 29 3L:9494884-9495010 6 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 GAATTG 6mer2-7 dme-miR-932-5p 3L - 9494974 9495005 3'utr path FlyBase G27021.1 ATAAGTTACATTGAATTGCCCCGATATTCACT 11 9494991 0.649993773 4 10 76 0.947368421 1.255272505 0.052631579 0.545454545 0.736842105 11 1 0 18 3L:9494974-9495005 6 13 3432 FBgn0036007 512.66 22.65333333 35.05666667 0.025357937 0.573866981 0.370828183 -3 -2 -2.5 0.01 dme-miR-276a-3p 6mer3-8 AGTTCC 3L 9495066 9495071 - 3L_9495066_9495071_- 1 1 1 0 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 3L - 9495044 9495088 3'utr path FlyBase G35740.1 CTATTTTGCAATCGATCAGTTCCAAATATGTTGAGCTAAATTACT 24 9495069 0.846063913 5 23 196 0.96 1.079181246 0.08 0.041666667 0.08 24 0 1 24 3L:9495044-9495088 6 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 AGTTCC 6mer3-8 dme-miR-276a-3p 3L - 9495052 9495086 3'utr path FlyBase G27022.1 ATTTTGCAATCGATCAGTTCCAAATATGTTGAGCT 14 9495069 0.853252409 2 11 93 0.85 0.929418926 0.2 0.357142857 0.55 14 2 1 17 3L:9495052-9495086 6 15 3433 FBgn0036007 512.66 22.65333333 35.05666667 0.029259158 0.662154208 0.427878673 -2 -2 -2 0.01 dme-miR-995-5p 6mer3-8 AATTCG 3L 9495160 9495165 - 3L_9495160_9495165_- 1 1 1 0 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 3L - 9495144 9495190 3'utr path FlyBase G35741.1 CCCACTTTTACTTTGTTCCGTGGCAAATTCGCGTGATTTGCGTACAT 40 9495177 0.586167386 14 35 338 0.875 1.62324929 0.104166667 0.15 0.291666667 40 6 0 42 3L:9495144-9495190 6 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 AATTCG 6mer3-8 dme-miR-995-5p 3L - 9495108 9495189 3'utr path FlyBase G27023.1 CCACTTTTACTTTGTTCCGTGGCAAATTCGCGTGATTTGCGTACATTATTTAACATTTTAGCATGTTTAGTAAGTAAGCGTA 36 9495177 0.681578625 15 33 360 0.905660377 1.681241237 0.188679245 0.361111111 0.566037736 36 5 0 48 3L:9495108-9495189 6 26 3434 FBgn0036007 512.66 22.65333333 35.05666667 0.050715874 1.147733961 0.741656366 12 12 12 0.01 dme-miR-282-5p 7mer-m8 AGAGGCT 3L 9495298 9495304 - 3L_9495298_9495304_- 0.631524569 0.631524569 0.631524569 0 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 3L - 9495235 9495509 3'utr path FlyBase G35742.1 CTACCGAGCACCATTATGCCGTTTTAGCACGTTTTAGTACACTCGCGATTATATAATGTAGAGAGTAAGCTAGTTGATAGCCGTTCAGAAACACTTTTAGAACAGTTCTGAACGATTCAAGCGGCATTCAAACTGGAACTTTACTAAGTGCACTTTAATAGTTTCCTATTGATTTCCTATTAATACCATTTAGTATGGATCTGTAAGAGGCTTAGTTACGTACCATCCTCCAAAAATCCCCACCCTTTCCTCTCTGTTCTAAAATAGTATTACTC 153 9495297 0.925718003 52 145 1226 0.95212766 1.775731776 0.14893617 0.189542484 0.340425532 153 7 2 179 3L:9495235-9495509 7 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 AGAGGCT 7mer-m8 dme-miR-282-5p 3L - 9495290 9495353 3'utr path FlyBase G27024.2 AATAGTTTCCTATTGATTTCCTATTAATACCATTTAGTATGGATCTGTAAGAGGCTTAGTTACG 47 9495297 0.679395505 14 45 391 0.96875 1.792391689 0.078125 0.319148936 0.5 47 2 0 62 3L:9495290-9495353 7 42 3435 FBgn0036007 512.66 22.65333333 35.05666667 0.081925643 1.854031783 1.198060283 -7 -7 -7 0.01 dme-miR-34-5p 7mer-A1 ACTGCCA 3L 9507401 9507407 - 3L_9507401_9507407_- 0.822291625 0.823348996 0.82282031 0.000747695 CG3408 FBtr0076426|FBtr0333863 9506816|9506816 9507578|9507578 3L - 9507354 9507484 3'utr CG3408 FlyBase G35760.1 AATTCAAAATGAGATACGTGTTGACCACCTGAACGAGTTATACGACTGCTACTTTGATATACCATTATCTGTAATTTACTGCCATTTATTTTGATAGACACTAAGCCCACTACGTCCATTGAAGGGAGATT 98 9507435 0.804423284 23 93 690 0.947826087 2.037426498 0.295652174 0.153061224 0.27826087 98 6 0 109 3L:9507354-9507484 7 CG3408 FBtr0076426|FBtr0333863 9506816|9506816 9507578|9507578 ACTGCCA 7mer-A1 dme-miR-34-5p 3L - 9507354 9507484 3'utr CG3408 FlyBase G27043.1 AATTCAAAATGAGATACGTGTTGACCACCTGAACGAGTTATACGACTGCTACTTTGATATACCATTATCTGTAATTTACTGCCATTTATTTTGATAGACACTAAGCCCACTACGTCCATTGAAGGGAGATT 90 9507436 0.987277269 25 82 724 0.920863309 1.26211193 0.258992806 0.4 0.611510791 90 5 6 128 3L:9507354-9507484 7 26 3436 FBgn0036008 265.6766667 17.37666667 26.79 0.097863318 1.496259352 0.970511385 28 29 28.5 0.01 dme-miR-1002-5p 6mer3-8 CTACTT 3L 9507431 9507436 - 3L_9507431_9507436_- 0.999950974 0.999789214 0.999870094 0.00011441 CG3408 FBtr0076426|FBtr0333863 9506816|9506816 9507578|9507578 3L - 9507354 9507484 3'utr CG3408 FlyBase G35760.1 AATTCAAAATGAGATACGTGTTGACCACCTGAACGAGTTATACGACTGCTACTTTGATATACCATTATCTGTAATTTACTGCCATTTATTTTGATAGACACTAAGCCCACTACGTCCATTGAAGGGAGATT 98 9507435 0.804423284 23 93 690 0.947826087 2.037426498 0.295652174 0.153061224 0.27826087 98 6 0 109 3L:9507354-9507484 6 CG3408 FBtr0076426|FBtr0333863 9506816|9506816 9507578|9507578 CTACTT 6mer3-8 dme-miR-1002-5p 3L - 9507354 9507484 3'utr CG3408 FlyBase G27043.1 AATTCAAAATGAGATACGTGTTGACCACCTGAACGAGTTATACGACTGCTACTTTGATATACCATTATCTGTAATTTACTGCCATTTATTTTGATAGACACTAAGCCCACTACGTCCATTGAAGGGAGATT 90 9507436 0.987277269 25 82 724 0.920863309 1.26211193 0.258992806 0.4 0.611510791 90 5 6 128 3L:9507354-9507484 6 39.5 3437 FBgn0036008 265.6766667 17.37666667 26.79 0.148676963 2.273163246 1.474430758 -1 0 -0.5 0.01 dme-miR-184-5p 6mer3-8 TGATAA 3L 9509930 9509935 - 3L_9509930_9509935_- 1 1 1 0 RpS9 FBtr0076424 9509888 9510460 3L - 9509888 9510030 stop_codon RpS9 FlyBase G35765.1 AGAAGAACCAGGGCGGTGGCGGTGGAGCTGCTGAAGAGGAGGAGGACTAAGCAGTGGTAGCCAGCTGTAGCCAAGACAAATACATGGCGCAGACTTGATAAAAATCCGTTTGCTTTACACAAATAAATGTAAAAATACACGAA 34 9509921 0.969701429 17 32 179 0.923076923 1.556302501 0.051282051 0.117647059 0.230769231 34 3 0 36 3L:9509888-9510030 6 RpS9 FBtr0076424 9509888 9510460 TGATAA 6mer3-8 dme-miR-184-5p 3L - 9509894 9510023 stop_codon RpS9 FlyBase G27050.1 CCAGGGCGGTGGCGGTGGAGCTGCTGAAGAGGAGGAGGACTAAGCAGTGGTAGCCAGCTGTAGCCAAGACAAATACATGGCGCAGACTTGATAAAAATCCGTTTGCTTTACACAAATAAATGTAAAAATA 32 9509935 0.943657492 14 30 126 0.906976744 1.591064607 0.255813953 0.28125 0.465116279 32 4 0 39 3L:9509894-9510023 6 13.5 3438 FBgn0010408 2997.456667 541.4933333 822.2533333 0.004503818 0.024931055 0.016418298 -14 0 -7 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 3L 9596485 9596491 + 3L_9596485_9596491_+ 0.823349562 0.823349562 0.823349562 0 CG42673 FBtr0302711 9595238 9596713 3L + 9596463 9596513 3'utr CG42673 FlyBase G29216.1 AATTTATGCAAAACGATTTTTGAGACTGAAACTGAAATTTGTACTAAGCAT 59 9596483 0.771565812 4 59 355 1 1.819543936 0.348484848 0.101694915 0.196969697 59 0 0 66 3L:9596463-9596513 7 CG42673 FBtr0302711 9595238 9596713 AGACTGA 7mer-A1 dme-miR-14-3p 3L + 9596463 9596500 3'utr CG42673 FlyBase G22103.1 AATTTATGCAAAACGATTTTTGAGACTGAAACTGAAAT 69 9596483 0.712520464 4 68 417 0.989010989 1.954242509 0.395604396 0.289855072 0.461538462 69 1 0 90 3L:9596463-9596500 7 63.5 3439 FBgn0261555 60.33333333 2.016666667 3.083333333 1.052486188 31.48760331 20.59459459 2 2 2 0.01 dme-miR-79-3p 7mer-A1 AGCTTTA 3L 9623600 9623606 + 3L_9623600_9623606_+ 0.823349562 0.823349562 0.823349562 0 LanB2 FBtr0076382|FBtr0345031 9623389|9623389 9623980|9623980 3L + 9623576 9623671 3'utr LanB2 FlyBase G29254.3 AAGGAGACCAACTGAGCAACGTTAAGCTTTAACGCATCATCGTTCGCCTACTGTATGCCATATACTATAATGATACAACGGATACAAGAGGATGGA 57 9623598 0.97239241 10 50 323 0.884057971 1.183269844 0.376811594 0.175438596 0.31884058 57 5 3 61 3L:9623576-9623671 7 LanB2 FBtr0345031|FBtr0076382 9623389|9623389 9623980|9623980 AGCTTTA 7mer-A1 dme-miR-79-3p 3L + 9623577 9623638 3'utr LanB2 FlyBase G22134.3 AGGAGACCAACTGAGCAACGTTAAGCTTTAACGCATCATCGTTCGCCTACTGTATGCCATAT 38 9623598 0.823802956 5 30 215 0.833333333 1.22184875 0.25 0.394736842 0.616666667 38 8 2 50 3L:9623577-9623638 7 38 3440 FBgn0267348 4568.76 93.89666667 143.73 0.008317355 0.404700202 0.26438461 2 2 2 0.01 dme-miR-1006-3p 7mer-A1 GAATTTA 3L 9680849 9680855 + 3L_9680849_9680855_+ 0.823349562 0.823349562 0.823349562 0 CG16717 FBtr0076392 9680809 9681060 3L + 9680846 9680872 3'utr CG16717 FlyBase G29266.1 AATGAATTTATTTTCGTCCCACTTTAT 14 9680857 0.689677962 3 13 139 0.947368421 1.255272505 0 0.214285714 0.421052632 14 1 0 18 3L:9680846-9680872 7 CG16717 FBtr0076392 9680809 9681060 GAATTTA 7mer-A1 dme-miR-1006-3p 3L + 9680818 9680870 3'utr CG16717 FlyBase G22146.1 AGATGATTATTTATTGTGTCACAGGTTCAATGAATTTATTTTCGTCCCACTTT 25 9680857 0.990818675 6 23 229 0.945945946 1.06694679 0 0.36 0.567567568 25 0 2 35 3L:9680818-9680870 7 18 3441 FBgn0036028 100.6666667 8.713333333 13.39666667 0.178807947 2.065799541 1.343617815 -8 -8 -8 0.01 dme-miR-33-5p 6mer3-8 CAATGC 3L 9716249 9716254 + 3L_9716249_9716254_+ 1 1 1 0 vsg FBtr0076399|FBtr0076400|FBtr0076398|FBtr0076401 9716221|9716221|9716221|9716221 9717716|9717716|9717716|9717716 3L + 9716196 9716339 stop_codon vsg FlyBase G29291.1 AACGAGCGCAACTACCACACCCTTTGAGCCGCCACCGCCTTTACGTCGGCCTTCAATGCGGCAGCCGGAGCTGCGGCGGCCAGCAGCAGTGCCGCATCCACGGATGCGGAGCGCGTGCGGTTTGTCCAGCCTTCGATACCGCTA 63 9716252 0.971479196 14 61 244 0.972972973 1.556302501 0.324324324 0.158730159 0.283783784 63 1 1 72 3L:9716196-9716339 6 vsg FBtr0076401|FBtr0076398|FBtr0076399|FBtr0076400 9716221|9716221|9716221|9716221 9717716|9717716|9717716|9717716 CAATGC 6mer3-8 dme-miR-33-5p 3L + 9716205 9716282 stop_codon vsg FlyBase G22165.1 AACTACCACACCCTTTGAGCCGCCACCGCCTTTACGTCGGCCTTCAATGCGGCAGCCGGAGCTGCGGCGGCCAGCAGC 19 9716252 0.980689344 5 19 61 1 1.414973348 0.423076923 0.315789474 0.5 19 0 0 26 3L:9716205-9716282 6 17.5 3442 FBgn0045823 8137.983333 435.5866667 668.4 0.00215041 0.040175702 0.026181927 -3 -3 -3 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3L 9716508 9716514 + 3L_9716508_9716514_+ 0.800666946 0.823349562 0.812008254 0.016039091 vsg FBtr0076399|FBtr0076400|FBtr0330097|FBtr0076398|FBtr0076401 9716221|9716221|9716461|9716221|9716221 9717716|9717716|9717716|9717716|9717716 3L + 9716382 9716547 stop_codon vsg FlyBase G29292.1 ATGGGTGGCAGTGGTGGTGGTGCGGCTGCAGCTCCACAAAACTGCTCGCCGTCGGCCCGAGATCGGTTGCTGCACACGTAATTTAAAAGCGGGGAGCCACACCATATTACCCAATATAATTAATATCCAAAGAGATGCCCCTATACCCCGATTCCCCAACAAAACA 53 9716533 0.956289891 19 47 221 0.892307692 1.462397998 0.030769231 0.20754717 0.353846154 53 6 1 58 3L:9716382-9716547 7 vsg FBtr0076401|FBtr0330097|FBtr0076398|FBtr0076399|FBtr0076400 9716221|9716461|9716221|9716221|9716221 9717716|9717716|9717716|9717716|9717716 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 9716501 9716546 3'utr vsg FlyBase G22168.1 TTAATATCCAAAGAGATGCCCCTATACCCCGATTCCCCAACAAAAC 9 9716533 0.943791145 2 7 37 0.777777778 0.84509804 0.111111111 0 0 9 2 0 7 3L:9716501-9716546 7 9.5 3443 FBgn0045823 8137.983333 435.5866667 668.4 0.001167365 0.021809667 0.014213046 -25 -25 -25 0.01 dme-miR-14-3p 6mer2-7 AGACTG 3L 9716936 9716941 + 3L_9716936_9716941_+ 1 1 1 0 vsg FBtr0076399|FBtr0076400|FBtr0330097|FBtr0076398|FBtr0076401 9716221|9716221|9716461|9716221|9716221 9717716|9717716|9717716|9717716|9717716 3L + 9716840 9716964 3'utr vsg FlyBase G29295.1 AGGGTCTTCCCAGGGCGACCATGAACCGAGAAATGAGTTATGAGATCGAAACGAAACGAGACGAGAGGAGTAAGAACAAATAACAGCAAATATGTGAGACTGCTTGATAGCGAGAAAGTGAAGAG 573 9716934 0.909584948 12 550 3109 0.96257485 1.853968463 0.359281437 0.144851658 0.266467066 573 17 8 643 3L:9716840-9716964 6 vsg FBtr0076401|FBtr0330097|FBtr0076398|FBtr0076399|FBtr0076400 9716221|9716461|9716221|9716221|9716221 9717716|9717716|9717716|9717716|9717716 AGACTG 6mer2-7 dme-miR-14-3p 3L + 9716821 9716968 3'utr vsg FlyBase G22170.1 AGTCCGGGGAGCCTGTCACAGGGTCTTCCCAGGGCGACCATGAACCGAGAAATGAGTTATGAGATCGAAACGAAACGAGACGAGAGGAGTAAGAACAAATAACAGCAAATATGTGAGACTGCTTGATAGCGAGAAAGTGAAGAGATCA 526 9716934 0.968363719 13 512 2794 0.974452555 2.301572525 0.412408759 0.418250951 0.627737226 526 18 3 801 3L:9716821-9716968 6 502 3444 FBgn0045823 8137.983333 435.5866667 668.4 0.061686044 1.152468701 0.751047277 2 2 2 0.01 dme-miR-190-5p 6mer3-8 ACATAT 3L 9717101 9717106 + 3L_9717101_9717106_+ 1 1 1 0 vsg FBtr0076399|FBtr0076400|FBtr0330097|FBtr0076398|FBtr0076401 9716221|9716221|9716461|9716221|9716221 9717716|9717716|9717716|9717716|9717716 3L + 9717080 9717128 3'utr vsg FlyBase G29297.1 TTCATTCTAGGAACTAAGAATACATATGTACTACCTAAAACCGAGCTAA 217 9717106 0.727599804 4 213 1218 0.976744186 1.924279286 0.003875969 0.147465438 0.282945736 217 4 2 252 3L:9717080-9717128 6 vsg FBtr0076401|FBtr0330097|FBtr0076398|FBtr0076399|FBtr0076400 9716221|9716461|9716221|9716221|9716221 9717716|9717716|9717716|9717716|9717716 ACATAT 6mer3-8 dme-miR-190-5p 3L + 9717063 9717148 3'utr vsg FlyBase G22171.1 TGAATAACTAAAATCGATTCATTCTAGGAACTAAGAATACATATGTACTACCTAAAACCGAGCTAAACACAATGGGAAACGCGTTT 158 9717106 0.969962145 6 153 829 0.966244726 1.757775491 0.008438819 0.392405063 0.594936709 158 5 3 229 3L:9717063-9717148 6 184.5 3445 FBgn0045823 8137.983333 435.5866667 668.4 0.022671464 0.423566684 0.276032316 -5 -5 -5 0.01 dme-miR-190-5p 6mer3-8 ACATAT 3L 9717449 9717454 + 3L_9717449_9717454_+ 1 1 1 0 vsg FBtr0076399|FBtr0076400|FBtr0330097|FBtr0076398|FBtr0076401 9716221|9716221|9716461|9716221|9716221 9717716|9717716|9717716|9717716|9717716 3L + 9717405 9717519 3'utr vsg FlyBase G29300.1 CATACACGCAAATGTTGAATATTTTGTACTAGAATGGAAACTATACATATGAATTACGTTTACCTAACCATACCGCGCTTGCTGTTGGATTAATACACATTTGAAGCTACAAATC 25 9717459 0.983914724 13 22 178 0.9 1.431363764 0.1 0.16 0.3 25 3 0 27 3L:9717405-9717519 6 vsg FBtr0076401|FBtr0330097|FBtr0076398|FBtr0076399|FBtr0076400 9716221|9716461|9716221|9716221|9716221 9717716|9717716|9717716|9717716|9717716 ACATAT 6mer3-8 dme-miR-190-5p 3L + 9717428 9717493 3'utr vsg FlyBase G22172.1 TTGTACTAGAATGGAAACTATACATATGAATTACGTTTACCTAACCATACCGCGCTTGCTGTTGGA 9 9717459 0.984459869 6 7 56 0.615384615 0.903089987 0.076923077 0.333333333 0.538461538 9 5 0 8 3L:9717428-9717493 6 6 3446 FBgn0045823 8137.983333 435.5866667 668.4 0.000737283 0.013774526 0.008976661 -10 -10 -10 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 9721102 9721108 - 3L_9721102_9721108_- 0.801970437 0.801970437 0.801970437 0 nbs FBtr0306041|FBtr0306041|FBtr0306041 9720412|9720412|9720412 9722003|9722003|9722003 3L - 9721089 9721133 5'utr nbs FlyBase G35833.1 GCTAAACGAAAGCGACAGCGATGATTGTGATAATCTTTTTAACTT 40 9721110 0.982852556 2 36 276 0.934782609 1.33243846 0.152173913 0.153846154 0.282608696 39 2 1 43 3L:9721089-9721133 7 nbs FBtr0306041|FBtr0306041|FBtr0306041 9720412|9720412|9720412 9722003|9722003|9722003 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 9721084 9721129 5'utr nbs FlyBase G27102.1 AACGAAAGCGACAGCGATGATTGTGATAATCTTTTTAACTTTGCAG 33 9721109 0.984256654 6 29 231 0.914893617 1.633468456 0.191489362 0.393939394 0.574468085 33 4 0 43 3L:9721084-9721129 7 35.5 3447 FBgn0261530 423 19.85333333 30.51333333 0.08392435 1.788112827 1.163425825 2 1 1.5 0.01 dme-miR-932-5p 6mer3-8 GGAATT 3L 9729294 9729299 + 3L_9729294_9729299_+ 1 1 1 0 Naa60 FBtr0089410|FBtr0089411 9728844|9728844 9729650|9729650 3L + 9729215 9729309 3'utr Naa60 FlyBase G29317.1 AAAAGATATCTATCTGTTCACTACTGCTGTAAATAGTCTTATGATGTTTTGTTTGAATCGAGCTGTAACCGAGTGATTTGGAATTAGCATAGCCC 27 9729292 0.755131322 8 25 202 0.96875 1.491361694 0.5 0.148148148 0.28125 27 1 0 31 3L:9729215-9729309 6 Naa60 FBtr0089411|FBtr0089410 9728844|9728844 9729650|9729650 GGAATT 6mer3-8 dme-miR-932-5p 3L + 9729265 9729302 3'utr Naa60 FlyBase G22185.1 GTTTGAATCGAGCTGTAACCGAGTGATTTGGAATTAGC 10 9729292 0.961810727 3 10 57 1 1.278753601 0.157894737 0.5 0.736842105 10 0 0 19 3L:9729265-9729302 6 12.5 3448 FBgn0036039 253.3733333 14.26 21.89 0.049334316 0.87657784 0.571037003 2 2 2 0.01 dme-miR-283-5p 6mer3-8 TGATAT 3L 9834583 9834588 - 3L_9834583_9834588_- 1 1 1 0 I-2 FBtr0076370|FBtr0112935 9834365|9834365 9835007|9835007 3L - 9834531 9834650 3'utr I-2 FlyBase G35838.1 ATGCGTCTCAGCCGTAGCGTCCTGTATTGTTGCAAATGTAGTTAAACAAAAGTCTTTCAAATTGATATCGAGATGGAAAGCCAACCCGTTCGCAGCTCCGTTTGCATTTAATTTGATTGG 32 9834589 0.795298144 8 31 252 1 1.568201724 0.108108108 0.15625 0.27027027 32 0 0 37 3L:9834531-9834650 6 I-2 FBtr0076370|FBtr0112935 9834365|9834365 9835007|9835007 TGATAT 6mer3-8 dme-miR-283-5p 3L - 9834536 9834648 3'utr I-2 FlyBase G27108.1 GCGTCTCAGCCGTAGCGTCCTGTATTGTTGCAAATGTAGTTAAACAAAAGTCTTTCAAATTGATATCGAGATGGAAAGCCAACCCGTTCGCAGCTCCGTTTGCATTTAATTTG 20 9834589 0.980797384 7 20 152 1 1.397940009 0.2 0.2 0.36 20 0 0 25 3L:9834536-9834648 6 18 3449 FBgn0028429 476.1233333 37.47333333 57.58666667 0.037805331 0.480341576 0.312572355 1 1 1 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 3L 9839158 9839164 - 3L_9839158_9839164_- 0.782911824 0.782911824 0.782911824 0 RasGAP1 FBtr0076368 9839091 9840561 3L - 9839145 9839187 3'utr RasGAP1 FlyBase G35847.1 CATGCCTAGCTGATAAGTTGTTGGTACAAAGAATCGAAAATAA 72 9839166 0.717684998 6 63 499 0.87804878 1.556302501 0.146341463 0.125 0.231707317 72 9 1 72 3L:9839145-9839187 7 RasGAP1 FBtr0076368 9839091 9840561 GTACAAA 7mer-A1 dme-miR-305-5p 3L - 9839096 9839189 3'utr RasGAP1 FlyBase G27116.1 ACCATGCCTAGCTGATAAGTTGTTGGTACAAAGAATCGAAAATAAAAACATAGATATTTTCCAAGGGAAAAATAAAGCGTATCGCCAATGGATA 85 9839166 0.980065407 8 79 551 0.952 1.598425707 0.192 0.364705882 0.568 85 4 2 119 3L:9839096-9839189 7 75.5 3450 FBgn0004390 1606.046667 35.75666667 55.00333333 0.047009842 2.11149436 1.372644082 2 2 2 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 3L 9839216 9839222 - 3L_9839216_9839222_- 0.620204266 0.620204266 0.620204266 0 RasGAP1 FBtr0076368 9839091 9840561 3L - 9839201 9839265 3'utr RasGAP1 FlyBase G35848.1 TGTTTGGAGTTTCCAACGTGGTTCATATACATATAATTTCACTTGCATTTTAAGGACACAATTAT 8 9839224 0.986844698 6 8 69 1 1 0.2 0.25 0.4 8 0 0 10 3L:9839201-9839265 7 RasGAP1 FBtr0076368 9839091 9840561 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 9839203 9839230 3'utr RasGAP1 FlyBase G27117.1 ATTTCACTTGCATTTTAAGGACACAATT 5 9839216 0.97312014 4 5 37 1 0.698970004 0 0 0 5 0 0 5 3L:9839203-9839230 7 4.5 3451 FBgn0004390 1606.046667 35.75666667 55.00333333 0.002801911 0.125850657 0.081813223 2 -6 -2 0.01 dme-miR-7-5p 7mer-m8 GTCTTCC 3L 9839410 9839416 - 3L_9839410_9839416_- 0.705950313 0.705950313 0.705950313 0 RasGAP1 FBtr0076368 9839091 9840561 3L - 9839357 9839436 3'utr RasGAP1 FlyBase G35849.1 CATCAATCGCATTGAAAAGTGTCTTCCTTCGCCGCGTTCAATCATATTGCCTTTTGTTTATGCATTCCAATCCAATAATT 16 9839417 0.989993035 4 14 134 0.882352941 0.875061263 0.117647059 0.0625 0.117647059 16 1 1 15 3L:9839357-9839436 7 RasGAP1 FBtr0076368 9839091 9840561 GTCTTCC 7mer-m8 dme-miR-7-5p 3L - 9839397 9839432 3'utr RasGAP1 FlyBase G27118.1 AATCGCATTGAAAAGTGTCTTCCTTCGCCGCGTTCA 16 9839417 0.775990243 3 16 117 1 1.477121255 0.1 0.75 0.866666667 16 0 0 30 3L:9839397-9839432 7 14 3452 FBgn0004390 1606.046667 35.75666667 55.00333333 0.008717057 0.391535378 0.254530028 1 1 1 0.01 dme-miR-278-3p 7mer-A1 CCACCGA 3L 9839535 9839541 - 3L_9839535_9839541_- 0.823349562 0.823349562 0.823349562 0 RasGAP1 FBtr0076368 9839091 9840561 3L - 9839500 9839565 3'utr RasGAP1 FlyBase G35850.1 GATTTGGTTAGCTTCGACTTACTTCCACCGATTTGTTTCCAAAGCTCTTCCATATTAATTACACAT 37 9839543 0.782668924 11 37 302 1 1.69019608 0.081632653 0.243243243 0.428571429 37 0 0 49 3L:9839500-9839565 7 RasGAP1 FBtr0076368 9839091 9840561 CCACCGA 7mer-A1 dme-miR-278-3p 3L - 9839510 9839560 3'utr RasGAP1 FlyBase G27119.1 GGTTAGCTTCGACTTACTTCCACCGATTTGTTTCCAAAGCTCTTCCATATT 17 9839543 0.98754403 4 16 144 0.925925926 1.397940009 0.037037037 0.470588235 0.666666667 17 2 0 25 3L:9839510-9839560 7 24.5 3453 FBgn0004390 1606.046667 35.75666667 55.00333333 0.015254849 0.685186912 0.44542755 2 2 2 0.01 dme-miR-184-5p 6mer3-8 TGATAA 3L 9840117 9840122 - 3L_9840117_9840122_- 1 1 1 0 RasGAP1 FBtr0076367|FBtr0330168|FBtr0076368 9839684|9839684|9839091 9840561|9840507|9840561 3L - 9840047 9840185 3'utr RasGAP1 FlyBase G35851.1 CAATATGGAAAGAGCATTTCTATACTTGTGTGAGCGCAAAGAGGGCAGAGAACCACTGAAAACTGATAACTTTATAAGCCTAAACTACTAAAAACTCAGAAACTGCTAAGATTTTTTAAAGCCTAGCCTAAGTTAAGTA 107 9840129 0.967023785 17 99 496 0.93220339 1.56427143 0.203389831 0.093457944 0.177966102 107 6 2 110 3L:9840047-9840185 6 RasGAP1 FBtr0076368|FBtr0330168|FBtr0076367 9839091|9839684|9839684 9840561|9840507|9840561 TGATAA 6mer3-8 dme-miR-184-5p 3L - 9840084 9840153 3'utr RasGAP1 FlyBase G27121.1 AGCGCAAAGAGGGCAGAGAACCACTGAAAACTGATAACTTTATAAGCCTAAACTACTAAAAACTCAGAAA 49 9840129 0.982897053 5 43 199 0.921875 1.469822016 0.359375 0.285714286 0.453125 49 4 1 59 3L:9840084-9840153 6 66 3454 FBgn0004390 1606.046667 35.75666667 55.00333333 0.041094696 1.845809639 1.199927277 7 7 7 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 3L 9840436 9840442 - 3L_9840436_9840442_- 0.782911824 0.782911824 0.782911824 0 RasGAP1 FBtr0076367|FBtr0330168|FBtr0076368 9839684|9839684|9839091 9840561|9840507|9840561 3L - 9840408 9840470 3'utr RasGAP1 FlyBase G35853.1 CGCTCCTACGCAACCAGAGGATGCTGCTGTACAAAACGATTAATTGTGCTAATTTCTAGGCTC 60 9840449 0.880378288 9 55 290 0.942857143 1.342422681 0.2 0.15 0.271428571 60 2 2 66 3L:9840408-9840470 7 RasGAP1 FBtr0076368|FBtr0330168|FBtr0076367 9839091|9839684|9839684 9840561|9840507|9840561 GTACAAA 7mer-A1 dme-miR-305-5p 3L - 9840405 9840469 3'utr RasGAP1 FlyBase G27122.1 GCTCCTACGCAACCAGAGGATGCTGCTGTACAAAACGATTAATTGTGCTAATTTCTAGGCTCTTG 37 9840447 0.767307546 6 35 154 0.966101695 1.278753601 0.254237288 0.324324324 0.576271186 37 0 2 57 3L:9840405-9840469 7 42 3455 FBgn0004390 1606.046667 35.75666667 55.00333333 0.02615117 1.174606134 0.763590085 7 5 6 0.01 dme-miR-1007-3p 6mer3-8 TGAGCT 3L 9858027 9858032 - 3L_9858027_9858032_- 1 1 1 0 CG10809 FBtr0300688|FBtr0076366 9857381|9857586 9858412|9858412 3L - 9858017 9858062 3'utr CG10809 FlyBase G35874.1 TTGTTTATCGTTTCCTAATTTGGCTGCCGTTGAGCTGGAGTTGGCA 24 9858043 0.724196412 5 20 211 0.862068966 1.096910013 0.275862069 0.166666667 0.310344828 24 3 1 25 3L:9858017-9858062 6 CG10809 FBtr0076366|FBtr0300688 9857586|9857381 9858412|9858412 TGAGCT 6mer3-8 dme-miR-1007-3p 3L - 9858017 9858053 3'utr CG10809 FlyBase G27139.1 GTTTCCTAATTTGGCTGCCGTTGAGCTGGAGTTGGCA 7 9858042 0.762299319 3 7 61 1 0.903089987 0.375 0.142857143 0.25 7 0 0 8 3L:9858017-9858053 6 15 3456 FBgn0036052 339.3966667 21.02 32.56333333 0.044196073 0.713606089 0.460640803 11 10 10.5 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3L 9860419 9860424 - 3L_9860419_9860424_- 0.621407535 0.999949667 0.810678601 0.267669757 iPLA2-VIA FBtr0076363|FBtr0076362|FBtr0076364|FBtr0076365 9860215|9860215|9860215|9860215 9860704|9860704|9860704|9860704 3L - 9860258 9860530 3'utr iPLA2-VIA FlyBase G35879.1 TCCTCCCACCACTTGGCTACAAAACAGAATCTGTGTGATTATCCTTAATTTTTCCAATTCCGAGGCTTCATCTCCAGGATTAGCAAACGAAATACGCTTTGTATATTGTGTTATTGGACTTAAGAGGGTACCATATCAGCACATTAATTTCGAAAATCTTTTATTTAATGTATTATAATCGGCCATGTATTTTATTGTACGTAACCCTCCAATTGAGTCGTTTAATTGATAAAAACATTCCGTGCCTCTGTTAGAAAATGAATGTGTATGTAG 377 9860431 0.882756776 40 362 2786 0.957746479 2.008600172 0.194835681 0.116710875 0.218309859 377 15 3 408 3L:9860258-9860530 6 iPLA2-VIA FBtr0076365|FBtr0076364|FBtr0076362|FBtr0076363 9860215|9860215|9860215|9860215 9860704|9860704|9860704|9860704 TGTGTT 6mer3-8 dme-miR-317-3p 3L - 9860387 9860531 3'utr iPLA2-VIA FlyBase G27144.2 ATCCTCCCACCACTTGGCTACAAAACAGAATCTGTGTGATTATCCTTAATTTTTCCAATTCCGAGGCTTCATCTCCAGGATTAGCAAACGAAATACGCTTTGTATATTGTGTTATTGGACTTAAGAGGGTACCATATCAGCACAT 231 9860431 0.815684365 22 221 1703 0.947368421 1.556302501 0.204678363 0.350649351 0.561403509 231 10 8 324 3L:9860387-9860531 6 76.5 3457 FBgn0036053 1579.763333 56.89333333 87.11666667 0.048424975 1.344621514 0.878132772 7 7 7 0.01 dme-miR-252-5p 6mer3-8 GTACTT 3L 9860626 9860631 - 3L_9860626_9860631_- 1 1 1 0 iPLA2-VIA FBtr0076363|FBtr0076362|FBtr0076364|FBtr0076365 9860215|9860215|9860215|9860215 9860704|9860704|9860704|9860704 3L - 9860593 9860688 3'utr iPLA2-VIA FlyBase G35881.1 AGACCGCATTTGCTGTAGAGATCTCTCATTCGAGGGATCCTTTCGATTCATGTCCGTGTACTTTAGACTCGTTTAACCCTCTTCGTTTTTATTAAG 35 9860627 0.746402216 12 33 318 0.95 1.579783597 0.35 0.114285714 0.225 35 2 0 38 3L:9860593-9860688 6 iPLA2-VIA FBtr0076365|FBtr0076364|FBtr0076362|FBtr0076363 9860215|9860215|9860215|9860215 9860704|9860704|9860704|9860704 GTACTT 6mer3-8 dme-miR-252-5p 3L - 9860606 9860688 3'utr iPLA2-VIA FlyBase G27145.1 AGACCGCATTTGCTGTAGAGATCTCTCATTCGAGGGATCCTTTCGATTCATGTCCGTGTACTTTAGACTCGTTTAACCCTCTT 27 9860626 0.764961691 11 26 239 0.975 1.290034611 0.125 0.296296296 0.525 27 0 1 39 3L:9860606-9860688 6 20.5 3458 FBgn0036053 1579.763333 56.89333333 87.11666667 0.012976627 0.360323412 0.235316625 -4 -5 -4.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 3L 9892397 9892402 + 3L_9892397_9892402_+ 1 1 1 0 CalpB FBtr0076343|FBtr0304675 9892344|9892344 9893319|9893011 3L + 9892355 9892415 3'utr CalpB FlyBase G29359.1 AATTGCTACTAATCTAATCCTAAGTGCGACGTATACTTAATCTACCTGTGCATCATATTAT 90 9892403 0.911279172 10 87 716 0.973684211 2.045322979 0.00877193 0.211111111 0.377192982 90 3 0 111 3L:9892355-9892415 6 CalpB FBtr0304675|FBtr0076343 9892344|9892344 9893011|9893319 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 3L + 9892373 9892424 3'utr CalpB FlyBase G22210.1 CCTAAGTGCGACGTATACTTAATCTACCTGTGCATCATATTATTCATGCATT 44 9892403 0.851781486 8 43 353 0.985915493 1.84509804 0.014084507 0.477272727 0.676056338 44 1 0 70 3L:9892373-9892424 6 64.5 3459 FBgn0025866 591.89 16.56333333 25.20333333 0.108972951 3.894143691 2.559185293 -6 -6 -6 0.01 dme-miR-282-5p 7mer-m8 AGAGGCT 3L 9893175 9893181 + 3L_9893175_9893181_+ 0.631524569 0.631524569 0.631524569 0 CalpB FBtr0076343 9892344 9893319 3L + 9893160 9893188 3'utr CalpB FlyBase G29363.1 TAACCAATCGGGTTTAGAGGCTCTTTTTG 5 9893174 0.641428468 3 4 43 0.888888889 0.903089987 0.222222222 0.6 0.777777778 5 1 0 8 3L:9893160-9893188 7 CalpB FBtr0076343 9892344 9893319 AGAGGCT 7mer-m8 dme-miR-282-5p 3L + 9893154 9893188 3'utr CalpB FlyBase G22213.1 TGAAATTAACCAATCGGGTTTAGAGGCTCTTTTTG 8 9893174 0.980765952 4 8 64 1 1 0.6 0.125 0.3 8 0 0 10 3L:9893154-9893188 7 6 3460 FBgn0025866 591.89 16.56333333 25.20333333 0.010137019 0.362245925 0.238063748 1 1 1 0.01 dme-miR-283-5p 8mer-A1 TGATATTA 3L 9895667 9895674 - 3L_9895667_9895674_- 0.592192292 0.592192292 0.592192292 0 CG6707 FBtr0076356|FBtr0076358|FBtr0076357 9894805|9894805|9894805 9895759|9895759|9895759 3L - 9895656 9895736 3'utr CG6707 FlyBase G35913.1 AAGGAAGAAAGTGCATTGTTTTATTTTTATATATATATATTATTCATATATATCATTCCTTTTGATATTAAATTTAAAACT 17 9895675 0.963762983 10 16 186 0.95 1.278753601 0.1 0.176470588 0.3 17 1 0 19 3L:9895656-9895736 8 CG6707 FBtr0076357|FBtr0076356|FBtr0076358 9894805|9894805|9894805 9895759|9895759|9895759 TGATATTA 8mer-A1 dme-miR-283-5p 3L - 9895658 9895691 3'utr CG6707 FlyBase G27171.1 ATATATATCATTCCTTTTGATATTAAATTTAAAA 5 9895676 0.918878124 3 5 56 1 0.84509804 0 0.4 0.571428571 5 0 0 7 3L:9895658-9895691 8 7.5 3461 FBgn0036058 1005.72 59.74 91.51 0.007457344 0.125544024 0.081958256 1 2 1.5 0.01 dme-miR-283-5p 7mer-A1 GATATTA 3L 9902465 9902471 + 3L_9902465_9902471_+ 0.782911824 0.782911824 0.782911824 0 nudE FBtr0345694|FBtr0076344|FBtr0113158|FBtr0345695 9902278|9902337|9902278|9902278 9902965|9902965|9902965|9903031 3L + 9902430 9902531 3'utr nudE FlyBase G29378.1 ATTTGAACTAAAATGACTTTGTATAAACCACTTGCGATATTATGAATTACACAACAGTTGATGTTGTTGTTTCGAGCCCAACATATATAACATGCCTTAGTA 108 9902461 0.98142893 16 106 772 0.985185185 1.822821645 0.081481481 0.231481481 0.385185185 108 1 1 133 3L:9902430-9902531 7 nudE FBtr0345694|FBtr0076344|FBtr0113158|FBtr0345695 9902278|9902337|9902278|9902278 9902965|9902965|9902965|9903031 GATATTA 7mer-A1 dme-miR-283-5p 3L + 9902400 9902481 3'utr nudE FlyBase G22228.1 ATTAATTAAGTTTCTGCTGCCTCTTTATTTATTTGAACTAAAATGACTTTGTATAAACCACTTGCGATATTATGAATTACAC 87 9902449 0.831453804 11 86 641 0.992125984 1.799340549 0.007874016 0.344827586 0.551181102 87 0 1 126 3L:9902400-9902481 7 46.5 3462 FBgn0036059 1404.16 85.35333333 130.67 0.033115884 0.544794189 0.355858269 4 16 10 0.01 dme-miR-8-3p 7mer-A1 AGTATTA 3L 9902684 9902690 + 3L_9902684_9902690_+ 0.823349562 0.823349562 0.823349562 0 nudE FBtr0345694|FBtr0076344|FBtr0113158|FBtr0345695 9902278|9902337|9902278|9902278 9902965|9902965|9902965|9903031 3L + 9902594 9902686 3'utr nudE FlyBase G29379.2 ACTCGAACGCAATTGTTTTGGCATACAATGTGTTTAGCGACTAAGTTCAAAGTTGATCAACCAGCAAAACAAGCGAAGAAGCTCTGTCCAAGT 27 9902678 0.912040689 8 24 117 0.862068966 0.920818754 0.275862069 0.074074074 0.137931034 27 2 2 25 3L:9902594-9902686 3 nudE FBtr0345694|FBtr0076344|FBtr0113158|FBtr0345695 9902278|9902337|9902278|9902278 9902965|9902965|9902965|9903031 AGTATTA 7mer-A1 dme-miR-8-3p 3L + 9902623 9902757 3'utr nudE FlyBase G22230.1 GTGTTTAGCGACTAAGTTCAAAGTTGATCAACCAGCAAAACAAGCGAAGAAGCTCTGTCCAAGTATTATACTTCAAGCGGACAACCAATACTCGTAGCGTTTAGGAAAAAGACAAGATCTAACCCGGGAAAAAAA 32 9902678 0.969282324 10 28 124 0.904761905 1.579783597 0.095238095 0.21875 0.404761905 32 4 0 38 3L:9902623-9902757 7 4.5 3463 FBgn0036059 1404.16 85.35333333 130.67 0.003204763 0.052722018 0.034437897 6 6 6 0.01 dme-miR-12-5p 7mer-m8 AATACTC 3L 9902709 9902715 + 3L_9902709_9902715_+ 0.67451515 0.67451515 0.67451515 7.07E-08 nudE FBtr0345694|FBtr0076344|FBtr0113158|FBtr0345695 9902278|9902337|9902278|9902278 9902965|9902965|9902965|9903031 3L + 9902697 9902757 3'utr nudE FlyBase G29380.1 AAGCGGACAACCAATACTCGTAGCGTTTAGGAAAAAGACAAGATCTAACCCGGGAAAAAAA 30 9902716 0.930582198 5 27 96 0.90625 0.985276743 0.1875 0.066666667 0.125 30 1 2 29 3L:9902697-9902757 7 nudE FBtr0345694|FBtr0076344|FBtr0113158|FBtr0345695 9902278|9902337|9902278|9902278 9902965|9902965|9902965|9903031 AATACTC 7mer-m8 dme-miR-12-5p 3L + 9902623 9902757 3'utr nudE FlyBase G22230.1 GTGTTTAGCGACTAAGTTCAAAGTTGATCAACCAGCAAAACAAGCGAAGAAGCTCTGTCCAAGTATTATACTTCAAGCGGACAACCAATACTCGTAGCGTTTAGGAAAAAGACAAGATCTAACCCGGGAAAAAAA 32 9902717 0.969282324 10 28 124 0.904761905 1.579783597 0.095238095 0.21875 0.404761905 32 4 0 38 3L:9902623-9902757 7 15.5 3464 FBgn0036059 1404.16 85.35333333 130.67 0.011038628 0.181598063 0.118619423 -7 -8 -7.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 9970951 9970957 + 3L_9970951_9970957_+ 0.754178801 0.754178804 0.754178802 0 Dronc FBtr0076347|FBtr0076347|FBtr0076347 9970748|9970748|9970748 9971002|9971002|9971002 3L + 9970935 9970974 3'utr Dronc FlyBase G29394.1 GAAATTATGTAATTTATGTGATAACTGCCAGAAATCTACA 35 9970948 0.642870553 6 31 267 0.87804878 1.255272505 0.414634146 0.142857143 0.268292683 35 4 1 36 3L:9970935-9970974 7 Dronc FBtr0076347|FBtr0076347|FBtr0076347 9970748|9970748|9970748 9971002|9971002|9971002 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 9970928 9970971 3'utr Dronc FlyBase G22243.1 AAGGTACGAAATTATGTAATTTATGTGATAACTGCCAGAAATCT 22 9970948 0.899930366 5 21 183 0.962962963 1.414973348 0.333333333 0.227272727 0.37037037 22 1 0 26 3L:9970928-9970971 7 28.5 3465 FBgn0026404 332.5566667 20.05666667 30.72333333 0.08569968 1.420973907 0.92763372 3 3 3 0.01 dme-miR-986-5p 6mer2-7 TTCGAG 3L 997394 997399 - 3L_997394_997399_- 1 1 1 0 trio FBtr0072646|FBtr0072645|FBtr0072649|FBtr0072648|FBtr0072647|FBtr0072644 995980|995980|997208|995980|995980|995980 998084|998084|998084|998084|998084|998084 3L - 997271 997449 3'utr trio FlyBase G33170.1 ACTGGATTTGCTTTGCAAAACTAAAGCAGAGATTTGTGTAATGGCACTCGTTCGAGTGTGACAACTTCGTGAAATAATTTAAGCTTAACTTTAGTTTATGAATGCAATGCAAAGCTTATTTGTACTTTATAATTTACAAATAAAATATGTAAGCTTTAAACGTAATCAAAACCAGAAAC 312 997384 0.88898997 33 298 2177 0.962864721 2.258876629 0.23872679 0.153846154 0.299734748 312 13 1 363 3L:997271-997449 6 trio FBtr0072647|FBtr0072644|FBtr0072646|FBtr0072645|FBtr0072649|FBtr0072648 995980|995980|995980|995980|997208|995980 998084|998084|998084|998084|998084|998084 TTCGAG 6mer2-7 dme-miR-986-5p 3L - 997281 997448 3'utr trio FlyBase G25098.1 CTGGATTTGCTTTGCAAAACTAAAGCAGAGATTTGTGTAATGGCACTCGTTCGAGTGTGACAACTTCGTGAAATAATTTAAGCTTAACTTTAGTTTATGAATGCAATGCAAAGCTTATTTGTACTTTATAATTTACAAATAAAATATGTAAGCTTTAAACGTAATCAA 221 997384 0.81309102 25 209 1510 0.952522255 1.904445041 0.293768546 0.375565611 0.590504451 221 13 3 321 3L:997281-997448 6 115.5 3466 FBgn0024277 3958.67 117.21 180.3966667 0.029176466 0.985410801 0.640255733 -15 -15 -15 0.01 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3L 997693 997698 - 3L_997693_997698_- 1 0.488659421 0.74432971 0.361572406 trio FBtr0072646|FBtr0072645|FBtr0072649|FBtr0072648|FBtr0072647|FBtr0072644 995980|995980|997208|995980|995980|995980 998084|998084|998084|998084|998084|998084 3L - 997673 997751 3'utr trio FlyBase G33172.2 CTATTCCGGATTTGTGTGTATGAAACGCAAAGTATTATATGCTCAAGATTACCTTTGACATTGTGTGCATTTTTAACTT 187 997696 0.779123676 16 180 1367 0.988764045 2.120573931 0.04494382 0.315508021 0.520599251 187 2 1 264 3L:997673-997751 6 trio FBtr0072647|FBtr0072644|FBtr0072646|FBtr0072645|FBtr0072649|FBtr0072648 995980|995980|995980|995980|997208|995980 998084|998084|998084|998084|998084|998084 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3L - 997673 997758 3'utr trio FlyBase G25101.1 TTGTTTTCTATTCCGGATTTGTGTGTATGAAACGCAAAGTATTATATGCTCAAGATTACCTTTGACATTGTGTGCATTTTTAACTT 113 997696 0.80283772 15 109 834 0.966292135 1.457377197 0.04494382 0.451327434 0.651685393 113 1 5 172 3L:997673-997758 6 128 3467 FBgn0024277 3958.67 117.21 180.3966667 0.032334092 1.092056992 0.709547479 -2 -2 -2 0.01 dme-miR-184-3p 6mer3-8 TCCGTC 3L 997929 997934 - 3L_997929_997934_- 1 1 1 0 trio FBtr0072646|FBtr0072645|FBtr0072649|FBtr0072648|FBtr0072647|FBtr0072644 995980|995980|997208|995980|995980|995980 998084|998084|998084|998084|998084|998084 3L - 997891 997959 3'utr trio FlyBase G33174.1 TGAGCATTAGCCTCGCACTTGTTTTTCCGTCTGTGCGTTTGTTTACGGATAGTTTTGCTCACTCACACC 79 997935 0.77147714 7 76 972 0.965517241 1.924279286 0.057471264 0.088607595 0.172413793 79 3 0 84 3L:997891-997959 6 trio FBtr0072647|FBtr0072644|FBtr0072646|FBtr0072645|FBtr0072649|FBtr0072648 995980|995980|995980|995980|997208|995980 998084|998084|998084|998084|998084|998084 TCCGTC 6mer3-8 dme-miR-184-3p 3L - 997837 997961 3'utr trio FlyBase G25102.1 AGTGAGCATTAGCCTCGCACTTGTTTTTCCGTCTGTGCGTTTGTTTACGGATAGTTTTGCTCACTCACACCCAGAAACACTCGCATACTCAATCCTAATTTGTATGTAACTTGTAATTGTAATTT 65 997935 0.987691095 10 64 769 0.97 1.986771734 0.09 0.369230769 0.59 65 3 0 97 3L:997837-997961 6 64.5 3468 FBgn0024277 3958.67 117.21 180.3966667 0.016293351 0.550294343 0.357545409 1 1 1 0.01 dme-miR-1007-3p 6mer3-8 TGAGCT 3R 10002286 10002291 - 3R_10002286_10002291_- 0.848365272 0.840738914 0.844552093 0.005392679 Mical FBtr0347211|FBtr0082207|FBtr0347214|FBtr0347212|FBtr0082213|FBtr0082212|FBtr0082208|FBtr0082209|FBtr0306608|FBtr0347213|FBtr0082210|FBtr0306609 10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552 10009621|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434 3R - 10002262 10002302 3'utr Mical FlyBase G49745.1 ACTAAAACCCGTGAGCTGTAACCGAAACGAGCAACTAACTA 22 10002291 0.895274207 3 22 58 1 1.477121255 0 0.272727273 0.466666667 22 0 0 30 3R:10002262-10002302 6 Mical FBtr0306609|FBtr0306608|FBtr0347213|FBtr0082210|FBtr0082209|FBtr0082208|FBtr0082212|FBtr0082213|FBtr0347212|FBtr0347214|FBtr0082207|FBtr0347211 10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552 10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10009621 TGAGCT 6mer3-8 dme-miR-1007-3p 3R - 10002269 10002356 3'utr Mical FlyBase G37603.1 AGGGAACAGGGGAGAGCGTACCAAAAAGGCAGCTGAATATACAGAATTAACAATACTAAAACCCGTGAGCTGTAACCGAAACGAGCAA 29 10002291 0.900392162 6 27 72 0.953488372 1.612783857 0.162790698 0.413793103 0.604651163 29 2 0 41 3R:10002269-10002356 6 19.5 3469 FBgn0053208 877.6666667 10.30333333 15.81666667 0.022218002 1.892591394 1.232876712 0 0 0 0.01 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3R 10002392 10002397 - 3R_10002392_10002397_- 1 1 1 0 Mical FBtr0347211|FBtr0082207|FBtr0347214|FBtr0347212|FBtr0082213|FBtr0082212|FBtr0082208|FBtr0082209|FBtr0306608|FBtr0347213|FBtr0082210|FBtr0306609 10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552 10009621|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434 3R - 10002361 10002410 3'utr Mical FlyBase G49747.1 CTGGTCTGCGAAGTGGTGCATGGACTGTTGAGCCTAAATACTTAAGATGA 18 10002390 0.977454485 5 17 117 0.913043478 1.322219295 0.304347826 0.222222222 0.391304348 18 2 0 21 3R:10002361-10002410 6 Mical FBtr0306609|FBtr0306608|FBtr0347213|FBtr0082210|FBtr0082209|FBtr0082208|FBtr0082212|FBtr0082213|FBtr0347212|FBtr0347214|FBtr0082207|FBtr0347211 10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552 10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10009621 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3R - 10002369 10002418 3'utr Mical FlyBase G37604.1 GGAGATTGCTGGTCTGCGAAGTGGTGCATGGACTGTTGAGCCTAAATACT 17 10002383 0.672871845 7 16 98 1 1.361727836 0.47826087 0.352941176 0.52173913 17 0 0 23 3R:10002369-10002418 6 16.5 3470 FBgn0053208 877.6666667 10.30333333 15.81666667 0.018799848 1.601423488 1.043203372 -7 -14 -10.5 0.01 dme-bantam-3p 6mer2-7 GATCTC 3R 10005141 10005146 - 3R_10005141_10005146_- 1 1 1 0 Mical FBtr0347211 10001552 10009621 3R - 10005099 10005195 5'utr Mical FlyBase G49752.1 GAGGAAAAGATGCAGCTAATACGTTCAAGATTGCACTACGACCAAAACAGATCTCTGAAGCCGAAGCAACTGGAGGAGATGCCATCCGGGGATCTGG 29 10005140 0.92103967 5 28 73 0.96969697 1.505149978 0.212121212 0.137931034 0.242424242 29 1 0 32 3R:10005099-10005195 6 Mical FBtr0347211 10001552 10009621 GATCTC 6mer2-7 dme-bantam-3p 3R - 10005104 10005189 5'utr Mical FlyBase G37608.1 AAGATGCAGCTAATACGTTCAAGATTGCACTACGACCAAAACAGATCTCTGAAGCCGAAGCAACTGGAGGAGATGCCATCCGGGGA 20 10005140 0.947355953 5 17 71 0.857142857 1.176091259 0.114285714 0.6 0.771428571 20 4 1 30 3R:10005104-10005189 6 18.5 3471 FBgn0053208 877.6666667 10.30333333 15.81666667 0.021078618 1.795535425 1.169652266 -6 -6 -6 0.01 dme-bantam-3p 7mer-m8 TGATCTC 3R 10005448 10005454 - 3R_10005448_10005454_- 0.661615243 0.661615243 0.661615243 0 Mical FBtr0347211 10001552 10009621 3R - 10005381 10005472 5'utr Mical FlyBase G49753.1 AGCGCCCACACGTAGTGCTGATCTCTATAAGCCGCGCCCCTTCAGCGAACACATCGATTCGAACGCTCTGGCGGGTTACAAGCTCGGCAAGA 25 10005446 0.983459107 5 19 148 0.807692308 0.84509804 0.230769231 0.04 0.076923077 25 3 2 21 3R:10005381-10005472 7 Mical FBtr0347211 10001552 10009621 TGATCTC 7mer-m8 dme-bantam-3p 3R - 10005398 10005463 5'utr Mical FlyBase G37609.1 ACGTAGTGCTGATCTCTATAAGCCGCGCCCCTTCAGCGAACACATCGATTCGAACGCTCTGGCGGG 9 10005447 0.964918724 5 9 48 1 1.146128036 0.142857143 0.222222222 0.5 9 0 0 14 3R:10005398-10005463 7 13.5 3472 FBgn0053208 877.6666667 10.30333333 15.81666667 0.015381694 1.310255581 0.853530032 -8 -7 -7.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3R 10005744 10005750 - 3R_10005744_10005750_- 0.823349562 0.823349562 0.823349562 0 Mical FBtr0347211 10001552 10009621 3R - 10005727 10005803 5'utr Mical FlyBase G49754.1 AGCTGGAAGAGATAACCAAAGAACGCACTAAGCAAAAGGATCTGATTCACGACCTAGTCATGGACAAGTTGCAGTCG 15 10005743 0.93936454 4 14 58 0.941176471 1.204119983 0.235294118 0.133333333 0.235294118 15 1 0 16 3R:10005727-10005803 7 Mical FBtr0347211 10001552 10009621 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R - 10005732 10005773 5'utr Mical FlyBase G37610.1 AGCAAAAGGATCTGATTCACGACCTAGTCATGGACAAGTTGC 5 10005743 0.979165846 2 5 24 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 3R:10005732-10005773 7 7.5 3473 FBgn0053208 877.6666667 10.30333333 15.81666667 0.008545385 0.727919767 0.474183351 -7 -7 -7 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 10047344 10047350 - 3R_10047344_10047350_- 0.661615645 0.661615645 0.661615645 0 CG12811 FBtr0082204 10047250 10047380 3R - 10047320 10047374 3'utr CG12811 FlyBase G49764.1 TTAACATTATGTGCTTAAATGTATTGTGTTCTGTTTGGTAATGTGTGGAGGCCAG 13 10047351 0.949943185 4 13 154 1 1.146128036 0.428571429 0.076923077 0.142857143 13 0 0 14 3R:10047320-10047374 7 CG12811 FBtr0082204 10047250 10047380 TGTGTTC 7mer-m8 dme-miR-317-3p 3R - 10047308 10047373 3'utr CG12811 FlyBase G37619.1 TAACATTATGTGCTTAAATGTATTGTGTTCTGTTTGGTAATGTGTGGAGGCCAGTGAAGAATAGCG 10 10047351 0.991319331 4 10 102 1 1.079181246 0.5 0.2 0.333333333 10 0 0 12 3R:10047308-10047373 7 8.5 3474 FBgn0037779 320.7766667 40.53 62.69666667 0.026498187 0.209721194 0.135573396 1 1 1 0.01 dme-miR-283-5p 8mer-m1 TGATATTT 3R 10051478 10051485 + 3R_10051478_10051485_+ 0.555593841 0.555593841 0.555593841 0 CG3925 FBtr0082174 10051320 10051527 3R + 10051414 10051502 3'utr CG3925 FlyBase G41687.1 ATTCGTTTCACAACTACTTTTAGCAAAAACACACGGCGTTTGATGGCGTGGATGTAAACCTAATTGATATTTACGATTATTTGAATAAT 22 10051477 0.984328457 11 20 163 0.92 0.884606581 0.32 0.136363636 0.24 22 0 2 23 3R:10051414-10051502 8 CG3925 FBtr0082174 10051320 10051527 TGATATTT 8mer-m1 dme-miR-283-5p 3R + 10051413 10051489 3'utr CG3925 FlyBase G31461.1 AATTCGTTTCACAACTACTTTTAGCAAAAACACACGGCGTTTGATGGCGTGGATGTAAACCTAATTGATATTTACGA 16 10051477 0.982135605 8 15 114 0.961538462 1.397940009 0.230769231 0.4375 0.653846154 16 1 0 25 3R:10051413-10051489 8 9.5 3475 FBgn0037780 153.6666667 8.94 13.53666667 0.061822126 1.062639821 0.701797587 1 1 1 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 3R 10073731 10073736 + 3R_10073731_10073736_+ 0.741480827 0.97436996 0.857925393 0.164677533 nerfin-2 FBtr0082177 10073452 10073761 3R + 10073668 10073749 stop_codon nerfin-2 FlyBase G41691.1 AGTCCGGCGGAAATGTTATCATGTGACTTAACAACTATTAGCAGCATTGAATCAACGATCTCTAGTTAAAGTTTAATAAATC 73 10073731 0.91463315 12 70 522 0.965909091 1.929418926 0.056818182 0.150684932 0.295454545 73 3 0 85 3R:10073668-10073749 6 nerfin-2 FBtr0082177 10073452 10073761 AGTTAA 6mer3-8 dme-miR-999-3p 3R + 10073662 10073744 stop_codon nerfin-2 FlyBase G31463.1 CTGCAGAGTCCGGCGGAAATGTTATCATGTGACTTAACAACTATTAGCAGCATTGAATCAACGATCTCTAGTTAAAGTTTAAT 49 10073730 0.981557683 12 47 346 0.970149254 1.511883361 0.044776119 0.265306122 0.462686567 49 1 1 65 3R:10073662-10073744 6 36 3476 FBgn0041105 0.666666667 0.036666667 0.056666667 54 981.8181818 635.2941176 0 1 0.5 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 3R 10101533 10101538 - 3R_10101533_10101538_- 1 1 1 0 Fmr1 FBtr0082200|FBtr0082198|FBtr0308123 10101418|10101418|10101418 10103231|10103231|10103231 3R - 10101487 10101562 3'utr Fmr1 FlyBase G49770.1 AATAATATAAATATAATGAGAAAAATGTGCGATTTAAATTTATTATTTATATAAAGATGAACTTATAAAGAATAGA 26 10101537 0.981745345 4 26 190 1 1.462397998 0.655172414 0.115384615 0.206896552 26 0 0 29 3R:10101487-10101562 6 Fmr1 FBtr0308123|FBtr0082200|FBtr0082198 10101418|10101418|10101418 10103231|10103231|10103231 ATGTGC 6mer3-8 dme-miR-305-3p 3R - 10101510 10101547 3'utr Fmr1 FlyBase G37623.1 ATGAGAAAAATGTGCGATTTAAATTTATTATTTATATA 26 10101537 0.932913922 3 26 171 1 1.579783597 0.736842105 0.346153846 0.552631579 26 0 0 38 3R:10101510-10101547 6 25 3477 FBgn0028734 4744.61 148.7233333 229.5766667 0.005269137 0.168097362 0.108896084 -1 -1 -1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 3R 10119215 10119222 + 3R_10119215_10119222_+ 0.64356572 0.64356572 0.64356572 0 CG3940 FBtr0344391|FBtr0082179|FBtr0344392 10119168|10119168|10119168 10119424|10119424|10120081 3R + 10119169 10119257 3'utr CG3940 FlyBase G41707.1 GATTTGAGATGGACAACTTGAAGGGAGCAGCCAATGACATACTCGTACCAAAGAATCGTTTAAGACAACGAATTTGTTTACCAACTATT 157 10119214 0.896310599 13 153 718 0.978609626 1.961421094 0.28342246 0.146496815 0.28342246 157 3 1 183 3R:10119169-10119257 8 CG3940 FBtr0082179|FBtr0344392|FBtr0344391 10119168|10119168|10119168 10119424|10120081|10119424 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 10119187 10119275 3'utr CG3940 FlyBase G31474.1 TGAAGGGAGCAGCCAATGACATACTCGTACCAAAGAATCGTTTAAGACAACGAATTTGTTTACCAACTATTTTAACAATTTAACAAAAA 64 10119214 0.976016478 7 60 282 0.956521739 1.643452676 0.097826087 0.328125 0.532608696 64 3 1 88 3R:10119187-10119275 8 99.5 3478 FBgn0037788 7.956666667 0.546666667 0.833333333 12.5052367 182.0121951 119.4 1 1 1 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3R 10119358 10119364 + 3R_10119358_10119364_+ 0.823349562 0.823349562 0.823349562 0 CG3940 FBtr0344391|FBtr0082179|FBtr0344392 10119168|10119168|10119168 10119424|10119424|10120081 3R + 10119282 10119387 3'utr CG3940 FlyBase G41708.1 GGAGACACAGGAGAGCAACGTCAGACCAGACAATTTATACTCATTAATTGTAATGCAGAACAGAACAAGAATTCAGCTAGTCAGTTTGTGTAAAGTTCATTAAGTG 141 10119354 0.982351544 14 122 913 0.865853659 1.67516709 0.18902439 0.14893617 0.268292683 141 20 2 142 3R:10119282-10119387 7 CG3940 FBtr0082179|FBtr0344392|FBtr0344391 10119168|10119168|10119168 10119424|10120081|10119424 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 10119278 10119379 3'utr CG3940 FlyBase G31474.2 AAACGGAGACACAGGAGAGCAACGTCAGACCAGACAATTTATACTCATTAATTGTAATGCAGAACAGAACAAGAATTCAGCTAGTCAGTTTGTGTAAAGTTC 86 10119354 0.976016478 12 71 552 0.868217054 1.447158031 0.209302326 0.360465116 0.573643411 86 14 3 112 3R:10119278-10119379 7 87.5 3479 FBgn0037788 7.956666667 0.546666667 0.833333333 10.99706745 160.0609756 105 4 4 4 0.01 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3R 10127495 10127500 - 3R_10127495_10127500_- 1 1 1 0 tws FBtr0082187|FBtr0082190|FBtr0345177|FBtr0082188|FBtr0082189 10126127|10126127|10126127|10127125|10126803 10128146|10128146|10128146|10128146|10128146 3R - 10127410 10127499 3'utr tws FlyBase G49796.1 TTGACAACGTTCATTCCATGCAAAAAGAGACGATAGGCCGCGGAGCTTGTCGATCGACTATGTGTCTCATTTTTAATCTCATCAGCAACG 18 10127486 0.979337812 7 15 114 0.894736842 1.230448921 0.105263158 0.055555556 0.105263158 18 2 0 17 3R:10127410-10127499 5 tws FBtr0082189|FBtr0345177|FBtr0082188|FBtr0082187|FBtr0082190 10126803|10126127|10127125|10126127|10126127 10128146|10128146|10128146|10128146|10128146 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3R - 10127388 10127503 3'utr tws FlyBase G37646.1 TCGTTTGACAACGTTCATTCCATGCAAAAAGAGACGATAGGCCGCGGAGCTTGTCGATCGACTATGTGTCTCATTTTTAATCTCATCAGCAACGTCAGCAATCGAACAGCCGGAAG 19 10127486 0.979999548 8 17 121 0.928571429 1.414973348 0.392857143 0.368421053 0.571428571 19 2 0 26 3R:10127388-10127503 6 6 3480 FBgn0004889 1118.713333 47.59666667 73.08666667 0.005363304 0.126059248 0.082094317 -14 -14 -14 0.01 dme-miR-190-5p 6mer3-8 ACATAT 3R 10127562 10127567 - 3R_10127562_10127567_- 1 1 1 0 tws FBtr0082187|FBtr0082190|FBtr0345177|FBtr0082188|FBtr0082189 10126127|10126127|10126127|10127125|10126803 10128146|10128146|10128146|10128146|10128146 3R - 10127524 10127608 3'utr tws FlyBase G49797.1 TTTTCTGTTCGCTTGTTAAGTTTACGATGAAAAGTCAAGAAACATATGCGCCCTGTTTGCTCTACTTTATAAATATAGACTAAAC 19 10127562 0.978667445 7 18 128 0.954545455 1.322219295 0.090909091 0.157894737 0.272727273 19 1 0 21 3R:10127524-10127608 6 tws FBtr0082189|FBtr0345177|FBtr0082188|FBtr0082187|FBtr0082190 10126803|10126127|10127125|10126127|10126127 10128146|10128146|10128146|10128146|10128146 ACATAT 6mer3-8 dme-miR-190-5p 3R - 10127540 10127572 3'utr tws FlyBase G37647.1 AAGAAACATATGCGCCCTGTTTGCTCTACTTTA 9 10127562 0.791565645 4 9 59 1 0.954242509 0.111111111 0 0 9 0 0 9 3R:10127540-10127572 6 10.5 3481 FBgn0004889 1118.713333 47.59666667 73.08666667 0.009385782 0.220603684 0.143665055 -5 -5 -5 0.01 dme-miR-970-3p 7mer-m8 TCTTATG 3R 10128050 10128056 - 3R_10128050_10128056_- 0.658999343 0.658999343 0.658999343 0 tws FBtr0082187|FBtr0082190|FBtr0082192|FBtr0082191|FBtr0082193|FBtr0345177|FBtr0082188|FBtr0082189|FBtr0082186 10126127|10126127|10127649|10127642|10127642|10126127|10127125|10126803|10127642 10128146|10128146|10128146|10128146|10128146|10128146|10128146|10128146|10128146 3R - 10128028 10128211 stop_codon tws FlyBase G49802.1 CCGAAGAAAATATCATCGCCGTGGCTGCGACCAATAACCTCTTCATATTTCAGGATAAATTTTAGCCAACACTCCTCACAAGAACCACACCATACGCCACAATCACACAAGCAACTATATCTACAGAAACACCAAGAAGTACGATCACGCCTCATTCTTATGTTAAATTAATCGGTTTGCTTCA 41 10128057 0.980352169 12 39 282 0.955555556 1.633468456 0.111111111 0.097560976 0.177777778 41 2 0 43 3R:10128028-10128211 7 tws FBtr0082189|FBtr0082186|FBtr0345177|FBtr0082188|FBtr0082191|FBtr0082193|FBtr0082187|FBtr0082190|FBtr0082192 10126803|10127642|10126127|10127125|10127642|10127642|10126127|10126127|10127649 10128146|10128146|10128146|10128146|10128146|10128146|10128146|10128146|10128146 TCTTATG 7mer-m8 dme-miR-970-3p 3R - 10128035 10128075 3'utr tws FlyBase G37651.1 AAGTACGATCACGCCTCATTCTTATGTTAAATTAATCGGTT 20 10128057 0.743410919 6 19 177 0.961538462 1.397940009 0.153846154 0.25 0.423076923 20 1 0 25 3R:10128035-10128075 7 21 3482 FBgn0004889 1118.713333 47.59666667 73.08666667 0.018771565 0.441207367 0.28733011 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3R 10158850 10158855 + 3R_10158850_10158855_+ 1 1 1 0 Invadolysin FBtr0082181 10158308 10159134 3R + 10158783 10158861 3'utr Invadolysin FlyBase G41714.1 AGCCAATCATTTTCGGGTGGATCATCCAAAGGCAGTTCTATGCTTCTTGAATATCGATCTGTACATTCCAAAGCCTATT 14 10158846 0.967226416 8 14 90 1 1.204119983 0.1875 0.142857143 0.25 14 0 0 16 3R:10158783-10158861 6 Invadolysin FBtr0082181 10158308 10159134 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 10158812 10158859 3'utr Invadolysin FlyBase G31480.1 AGGCAGTTCTATGCTTCTTGAATATCGATCTGTACATTCCAAAGCCTA 5 10158847 0.982929752 4 5 38 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:10158812-10158859 6 5 3483 FBgn0086359 69.66666667 2.306666667 3.503333333 0.071770335 2.167630058 1.427212179 4 3 3.5 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3R 10158971 10158977 + 3R_10158971_10158977_+ 0.521223855 0.521223855 0.521223855 0 Invadolysin FBtr0082181 10158308 10159134 3R + 10158941 10158994 3'utr Invadolysin FlyBase G41716.1 AATATGGTTTTCGAAATTTGTTGATTGCCTTGTGATTTATGTATTCTATTAATT 70 10158977 0.745051529 8 70 777 1 1.924279286 0.333333333 0.157142857 0.297619048 70 0 0 84 3R:10158941-10158994 7 Invadolysin FBtr0082181 10158308 10159134 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 10158958 10158996 3'utr Invadolysin FlyBase G31482.1 TTGTTGATTGCCTTGTGATTTATGTATTCTATTAATTTT 60 10158977 0.724593462 7 59 673 0.989690722 1.982271233 0.268041237 0.383333333 0.618556701 60 1 0 96 3R:10158958-10158996 7 64.5 3484 FBgn0086359 69.66666667 2.306666667 3.503333333 0.925837321 27.96242775 18.41103711 -6 -6 -6 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 10161794 10161799 - 3R_10161794_10161799_- 1 1 1 0 Best1 FBtr0114590 10161462 10161984 3R - 10161768 10161911 3'utr Best1 FlyBase G49834.2 AAGCTAAATTACCTATACTATATTCTAGACGTATATGCCGCTGACATATACTGGACATACGCAAATTAACGGACAGTTTAAGAATGCTCATAATGTCTAAAACGAGCTCGAGTGATGATGGACCTAATTAACGCAGTTAATAAC 118 10161793 0.836963465 15 113 596 0.965986395 1.67516709 0.401360544 0.211864407 0.367346939 118 3 2 142 3R:10161768-10161911 6 Best1 FBtr0082183|FBtr0337020|FBtr0114590|FBtr0306023 10161702|10161702|10161462|10161702 10161984|10161984|10161984|10161984 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R - 10161767 10161838 3'utr Best1 FlyBase G37674.1 CAGTTTAAGAATGCTCATAATGTCTAAAACGAGCTCGAGTGATGATGGACCTAATTAACGCAGTTAATAACA 112 10161793 0.846586468 8 112 536 1 2.23299611 0.380116959 0.419642857 0.619883041 112 0 0 171 3R:10161767-10161838 6 103.5 3485 FBgn0040238 1105.333333 45.14 68.90666667 0.093636912 2.292866637 1.502031734 -6 -6 -6 0.01 dme-miR-305-5p 8mer-m1 AGTACAAT 3R 10302596 10302603 + 3R_10302596_10302603_+ 0.570363044 0.570363044 0.570363044 0 CG43143 FBtr0305356|FBtr0337049 10302298|10302298 10302898|10302898 3R + 10302566 10302638 3'utr CG43143 FlyBase G41728.1 AAGGCAGCAGTAGCGCAACCACATTCCCTCAGTACAATGAATATTGTATTATTGTGATTTTGATTTTAAAATT 65 10302589 0.918488346 6 63 438 0.973333333 1.86332286 0.186666667 0.138461538 0.253333333 65 2 0 73 3R:10302566-10302638 8 CG43143 FBtr0337049|FBtr0305356 10302298|10302298 10302898|10302898 AGTACAAT 8mer-m1 dme-miR-305-5p 3R + 10302574 10302638 3'utr CG43143 FlyBase G31490.1 AGTAGCGCAACCACATTCCCTCAGTACAATGAATATTGTATTATTGTGATTTTGATTTTAAAATT 49 10302589 0.93364133 6 47 387 0.970588235 1.51851394 0.161764706 0.265306122 0.470588235 49 1 1 66 3R:10302574-10302638 8 39 3486 FBgn0262617 452.3433333 9.223333333 14.24666667 0.086217696 4.228406216 2.737482452 7 7 7 0.01 dme-miR-7-5p 6mer2-7 TCTTCC 3R 10308348 10308353 - 3R_10308348_10308353_- 1 1 1 0 CG6293 FBtr0082240|FBtr0337051 10308261|10307804 10308565|10308565 3R - 10308334 10308418 3'utr CG6293 FlyBase G49856.1 TTCCGTGTTTCTGTTAATTTGCTTTTTAAATTCGCTTATTGTTTGTTGCTACGATTACCTAACACTCTTCCGTTTCGCTACCAAC 114 10308364 0.847942299 9 110 932 0.969924812 2.11058971 0.503759398 0.114035088 0.240601504 114 4 0 129 3R:10308334-10308418 6 CG6293 FBtr0082240|FBtr0337051 10308261|10307804 10308565|10308565 TCTTCC 6mer2-7 dme-miR-7-5p 3R - 10308329 10308399 3'utr CG6293 FlyBase G37688.1 TGCTTTTTAAATTCGCTTATTGTTTGTTGCTACGATTACCTAACACTCTTCCGTTTCGCTACCAACTCGCA 57 10308364 0.945425316 6 53 468 0.954022989 1.919078092 0.413793103 0.385964912 0.597701149 57 4 0 83 3R:10308329-10308399 6 59.5 3487 FBgn0037807 1669.17 87.66333333 134.2866667 0.035646459 0.678733032 0.443081964 11 11 11 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 3R 10312110 10312115 - 3R_10312110_10312115_- 1 1 1 0 Bruce FBtr0331684|FBtr0331682|FBtr0082239|FBtr0331683|FBtr0331681 10312037|10312037|10312037|10312037|10312037 10312643|10312643|10312643|10312643|10312643 3R - 10312093 10312135 3'utr Bruce FlyBase G49875.1 ATGTATGAACGTAGTGATTTAGTTAAATATTGACACAAGAATA 40 10312117 0.890763749 5 36 333 0.918367347 1.352182518 0.142857143 0.225 0.367346939 40 3 1 45 3R:10312093-10312135 6 Bruce FBtr0331681|FBtr0331683|FBtr0082239|FBtr0331682|FBtr0331684 10312037|10312037|10312037|10312037|10312037 10312643|10312643|10312643|10312643|10312643 AGTTAA 6mer3-8 dme-miR-999-3p 3R - 10312101 10312139 3'utr Bruce FlyBase G37702.1 AACTATGTATGAACGTAGTGATTTAGTTAAATATTGACA 18 10312117 0.704239503 4 18 149 1 1.380211242 0.125 0.333333333 0.5 18 0 0 24 3R:10312101-10312139 6 29 3488 FBgn0266717 4248.75 33.1 50.67666667 0.006825537 0.876132931 0.572255476 2 2 2 0.01 dme-miR-965-3p 8mer-A1 TACGCTTA 3R 10360332 10360339 + 3R_10360332_10360339_+ 0.625364919 0.625364919 0.625364919 0 jumu FBtr0082237 10360257 10361612 3R + 10360291 10360360 3'utr jumu FlyBase G41772.1 ATCAATTAGTTTTAGACCTTTGGCATTTAAGAAACCCATGCTACGCTTAAACGTAATCCTAGAAGCCCCA 54 10360332 0.79811269 7 53 237 1 1.826074803 0.298507463 0.203703704 0.358208955 54 0 0 67 3R:10360291-10360360 8 jumu FBtr0082237 10360257 10361612 TACGCTTA 8mer-A1 dme-miR-965-3p 3R + 10360294 10360355 3'utr jumu FlyBase G31514.1 AATTAGTTTTAGACCTTTGGCATTTAAGAAACCCATGCTACGCTTAAACGTAATCCTAGAAG 55 10360332 0.768103162 8 50 250 0.918604651 1.2955671 0.348837209 0.309090909 0.558139535 55 4 3 79 3R:10360294-10360355 8 45 3489 FBgn0015396 1426.553333 44.76666667 68.68333333 0.031544562 1.005212211 0.655180781 0 0 0 0.01 dme-bantam-3p 7mer-m8 TGATCTC 3R 10360735 10360741 + 3R_10360735_10360741_+ 0.661615243 0.661615243 0.661615243 0 jumu FBtr0082237 10360257 10361612 3R + 10360707 10360817 3'utr jumu FlyBase G41776.2 GAGCTGGTTTGAGTTGCAACTTTTGATTTGATCTCCCTACTGACAAATAAATTTTCATCCTTCAATCGATAAGAAACTTGACAATGCATTTATGACAAACGATTCCACGCT 95 10360734 0.769639749 17 90 867 0.946902655 2.029383778 0.088495575 0.147368421 0.283185841 95 6 0 107 3R:10360707-10360817 7 jumu FBtr0082237 10360257 10361612 TGATCTC 7mer-m8 dme-bantam-3p 3R + 10360663 10360815 3'utr jumu FlyBase G31516.1 CCACTGACGACGCATGAAGCATGTTAATACTTTTTACCAGACTCGAGCTGGTTTGAGTTGCAACTTTTGATTTGATCTCCCTACTGACAAATAAATTTTCATCCTTCAATCGATAAGAAACTTGACAATGCATTTATGACAAACGATTCCACG 80 10360734 0.954561351 21 75 714 0.922330097 1.375663614 0.067961165 0.2625 0.427184466 80 5 3 95 3R:10360663-10360815 7 68 3490 FBgn0015396 1426.553333 44.76666667 68.68333333 0.047667338 1.518987342 0.990050959 1 1 1 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3R 10361265 10361270 + 3R_10361265_10361270_+ 1 1 1 0 jumu FBtr0082237 10360257 10361612 3R + 10361218 10361339 3'utr jumu FlyBase G41779.1 TGTAAACGAAATCCGAATTCCAAATAATACAAGATACGAAAACCAATAAGACTTAAAAGAAGCGTACCAGACTAATGAACATGATCAGGCCTCAGAAGTAAATAGTACAAAGAGCTAGACTT 141 10361264 0.980647242 12 116 397 0.866666667 1.377184787 0.218181818 0.113475177 0.242424242 141 17 5 143 3R:10361218-10361339 6 jumu FBtr0082237 10360257 10361612 AAGACT 6mer3-8 dme-miR-14-3p 3R + 10361248 10361334 3'utr jumu FlyBase G31519.1 AAGATACGAAAACCAATAAGACTTAAAAGAAGCGTACCAGACTAATGAACATGATCAGGCCTCAGAAGTAAATAGTACAAAGAGCTA 82 10361264 0.947483738 7 67 196 0.879032258 2.037426498 0.346774194 0.37804878 0.588709677 82 15 0 109 3R:10361248-10361334 6 69.5 3491 FBgn0015396 1426.553333 44.76666667 68.68333333 0.048718823 1.552494415 1.011890318 1 1 1 0.01 dme-miR-11-3p 7mer-m1 TGTGATG 3R 10361417 10361423 + 3R_10361417_10361423_+ 0.612071121 0.612071121 0.612071121 0 jumu FBtr0082237 10360257 10361612 3R + 10361396 10361509 3'utr jumu FlyBase G41780.1 TTTGTTATTACCCTTTTCTTTTGTGATGCTTCGACTTAGCTTGCGCATTTAACAATTCCATTTACGAACCAGGAACATTTATGCATTTTTTGTTGTAATATTAGCACCTAAATA 52 10361415 0.94948096 19 51 525 0.969230769 1.799340549 0.307692308 0.230769231 0.384615385 52 2 0 63 3R:10361396-10361509 7 jumu FBtr0082237 10360257 10361612 TGTGATG 7mer-m1 dme-miR-11-3p 3R + 10361370 10361556 3'utr jumu FlyBase G31520.1 AGGATGGCTGATGGAATTAAACCGTTTTTGTTATTACCCTTTTCTTTTGTGATGCTTCGACTTAGCTTGCGCATTTAACAATTCCATTTACGAACCAGGAACATTTATGCATTTTTTGTTGTAATATTAGCACCTAAATATTGTATTTAATCATTAAGTGAAGCTCTGTAAATCTTTAAGCTAAGAA 45 10361415 0.991478366 25 41 442 0.921875 1.469822016 0.375 0.311111111 0.515625 45 4 1 59 3R:10361370-10361556 7 22.5 3492 FBgn0015396 1426.553333 44.76666667 68.68333333 0.015772281 0.502606106 0.327590391 2 2 2 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 3R 10361477 10361483 + 3R_10361477_10361483_+ 0.620204266 0.620204266 0.620204266 0 jumu FBtr0082237 10360257 10361612 3R + 10361396 10361509 3'utr jumu FlyBase G41780.1 TTTGTTATTACCCTTTTCTTTTGTGATGCTTCGACTTAGCTTGCGCATTTAACAATTCCATTTACGAACCAGGAACATTTATGCATTTTTTGTTGTAATATTAGCACCTAAATA 52 10361485 0.94948096 19 51 525 0.969230769 1.799340549 0.307692308 0.230769231 0.384615385 52 2 0 63 3R:10361396-10361509 7 jumu FBtr0082237 10360257 10361612 TGCATTT 7mer-m8 dme-miR-277-3p 3R + 10361370 10361556 3'utr jumu FlyBase G31520.1 AGGATGGCTGATGGAATTAAACCGTTTTTGTTATTACCCTTTTCTTTTGTGATGCTTCGACTTAGCTTGCGCATTTAACAATTCCATTTACGAACCAGGAACATTTATGCATTTTTTGTTGTAATATTAGCACCTAAATATTGTATTTAATCATTAAGTGAAGCTCTGTAAATCTTTAAGCTAAGAA 45 10361484 0.991478366 25 41 442 0.921875 1.469822016 0.375 0.311111111 0.515625 45 4 1 59 3R:10361370-10361556 7 18 3493 FBgn0015396 1426.553333 44.76666667 68.68333333 0.012617825 0.402084885 0.262072313 -8 -7 -7.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 10362577 10362582 - 3R_10362577_10362582_- 1 1 1 0 Rfx FBtr0337104|FBtr0337105|FBtr0337103|FBtr0337107|FBtr0305995|FBtr0337106 10362160|10361758|10361758|10361758|10361758|10362160 10363162|10363162|10363162|10363162|10363162|10363162 3R - 10362507 10362609 3'utr Rfx FlyBase G49956.1 GACAGCATCGTCTGGTCTTGTCTGGCCTGATCTGTATTCGTAGGATACGTTTTAGTTTAAGTACATGTGCATTAATAATTGTAATCAACTGTCTACGATAACG 23 10362588 0.992152515 8 21 235 0.92 1.361727836 0.16 0.086956522 0.16 23 2 0 23 3R:10362507-10362609 6 Rfx FBtr0305995|FBtr0337106|FBtr0337103|FBtr0337107|FBtr0337104|FBtr0337105 10361758|10362160|10361758|10361758|10362160|10361758 10363162|10363162|10363162|10363162|10363162|10363162 TGATCT 6mer3-8 dme-bantam-3p 3R - 10362546 10362618 3'utr Rfx FlyBase G37769.1 AGCCAGTGCGACAGCATCGTCTGGTCTTGTCTGGCCTGATCTGTATTCGTAGGATACGTTTTAGTTTAAGTAC 10 10362587 0.991876695 5 9 90 0.947368421 1.255272505 0 0.6 0.789473684 10 1 0 18 3R:10362546-10362618 6 11 3494 FBgn0020379 131.4266667 3.386666667 5.15 0.083696865 3.248031496 2.13592233 6 5 5.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 10399396 10399401 + 3R_10399396_10399401_+ 1 1 1 0 cwo FBtr0082246|FBtr0082246|FBtr0082246|FBtr0305152|FBtr0305152|FBtr0305152|FBtr0305151|FBtr0305151|FBtr0305151 10399337|10399337|10399337|10399337|10399337|10399337|10399337|10399337|10399337 10400752|10400752|10400752|10400752|10400752|10400752|10400752|10400752|10400752 3R + 10399279 10399422 stop_codon cwo FlyBase G41802.1 GTGGCCGCCGCAGCGGTGGCTAAGGCCAAACTGGAGCAGGCCATGAACCAGAGCTGGTAAAGCAAAGCAATCGCAATGCAATGGGTCGACAGATGGAACAACACTACCTCAGTACTTCTGTGAATAATCATTAAATGATTAATC 78 10399395 0.9785535 14 73 483 0.944444444 1.929418926 0.344444444 0.08974359 0.211111111 78 5 0 85 3R:10399279-10399422 6 cwo FBtr0305151|FBtr0305151|FBtr0305151|FBtr0082246|FBtr0082246|FBtr0082246|FBtr0305152|FBtr0305152|FBtr0305152 10399337|10399337|10399337|10399337|10399337|10399337|10399337|10399337|10399337 10400752|10400752|10400752|10400752|10400752|10400752|10400752|10400752|10400752 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 10399307 10399411 stop_codon cwo FlyBase G31537.1 AACTGGAGCAGGCCATGAACCAGAGCTGGTAAAGCAAAGCAATCGCAATGCAATGGGTCGACAGATGGAACAACACTACCTCAGTACTTCTGTGAATAATCATTA 38 10399395 0.976328673 13 35 224 0.896551724 1.716003344 0.24137931 0.421052632 0.620689655 38 6 0 52 3R:10399307-10399411 6 33 3495 FBgn0259938 1085.47 27.38 41.65666667 0.030401577 1.205259313 0.792190126 1 1 1 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 10399460 10399465 + 3R_10399460_10399465_+ 1 1 1 0 cwo FBtr0082246|FBtr0305152|FBtr0305151 10399337|10399337|10399337 10400752|10400752|10400752 3R + 10399435 10399478 3'utr cwo FlyBase G41803.1 CACTAAGCGACATCTGCGCCCAAGTGTACCTACATACAAACAGA 59 10399459 0.886641848 3 58 291 0.967741935 1.77815125 0.032258065 0.050847458 0.096774194 59 2 0 60 3R:10399435-10399478 6 cwo FBtr0305151|FBtr0082246|FBtr0305152 10399337|10399337|10399337 10400752|10400752|10400752 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 10399439 10399479 3'utr cwo FlyBase G31538.1 AAGCGACATCTGCGCCCAAGTGTACCTACATACAAACAGAA 20 10399459 0.874813027 2 19 97 0.9375 1.477121255 0 0.4 0.625 20 2 0 30 3R:10399439-10399479 6 39.5 3496 FBgn0259938 1085.47 27.38 41.65666667 0.036389767 1.442658875 0.948227575 1 1 1 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 3R 10400000 10400005 + 3R_10400000_10400005_+ 1 1 1 0 cwo FBtr0082246|FBtr0305152|FBtr0305151 10399337|10399337|10399337 10400752|10400752|10400752 3R + 10399922 10400109 3'utr cwo FlyBase G41807.1 GTGCAAGCCGATAGAACGTATATGATGCCAAGAGTCAGTCCCACGTAAAAAATCTAATGGATTTTAAAACAAAACTAAATGTGAATTAAATGTATTTTTAGAGGTTAAACGTTTTTTGCAATTTAAATAAGTGTTGTGGTTTCATATAAGGTAGTCAGATAGCCAAGTGACTCCCGTCAAACAAACAA 156 10400007 0.812963609 22 152 1032 0.974489796 2.281033367 0.290816327 0.192307692 0.357142857 156 5 0 191 3R:10399922-10400109 6 cwo FBtr0305151|FBtr0082246|FBtr0305152 10399337|10399337|10399337 10400752|10400752|10400752 ATGTGA 6mer3-8 dme-miR-1003-3p 3R + 10399933 10400032 3'utr cwo FlyBase G31540.1 TAGAACGTATATGATGCCAAGAGTCAGTCCCACGTAAAAAATCTAATGGATTTTAAAACAAAACTAAATGTGAATTAAATGTATTTTTAGAGGTTAAACG 111 10400007 0.748005682 11 102 645 0.919463087 1.835690571 0.409395973 0.272727273 0.463087248 110 11 1 137 3R:10399933-10400032 6 103.5 3497 FBgn0259938 1085.47 27.38 41.65666667 0.095350401 3.780131483 2.484596303 -7 -7 -7 0.01 dme-miR-283-5p 7mer-A1 GATATTA 3R 10403056 10403062 - 3R_10403056_10403062_- 0.782911824 0.782911824 0.782911824 0 CG6325 FBtr0082260 10402965 10403647 3R - 10402997 10403076 3'utr CG6325 FlyBase G49960.1 GAACTACGTTTCAAGATATTAAACATAAGAAATACAATTCAAGATATTGTTCAGGAAGTCTCCAGTCCTCTAAAGTAATG 9 10403067 0.923203949 5 9 56 1 1.079181246 0.333333333 0.222222222 0.416666667 9 0 0 12 3R:10402997-10403076 7 CG6325 FBtr0082260 10402965 10403647 GATATTA 7mer-A1 dme-miR-283-5p 3R - 10403034 10403080 3'utr CG6325 FlyBase G37772.2 CTAGGAACTACGTTTCAAGATATTAAACATAAGAAATACAATTCAAG 10 10403067 0.972669318 4 5 42 0.666666667 0.698970004 0 0.3 0.533333333 10 4 1 10 3R:10403034-10403080 7 5 3498 FBgn0037814 441 14.70666667 22.57666667 0.011337868 0.339981868 0.221467592 5 5 5 0.01 dme-miR-8-3p 6mer2-7 AGTATT 3R 10403397 10403402 - 3R_10403397_10403402_- 1 1 1 0 CG6325 FBtr0082260 10402965 10403647 3R - 10403308 10403479 3'utr CG6325 FlyBase G49962.2 AGTTTTTAGTTTGCAAAACTCGATAAGGTTGCGTGCATCTAGTTCAGTTCTAAACACAAACAACGTGTGCTGTATTTAGTATTTAGTTACCTATACCTTACTTAGTGCAACGAAACGCTTTTCAAAAACATGAAACGCGTCCTTATTTCGACTGAAGTCATTTAAGTAATCT 293 10403414 0.859314629 32 274 2305 0.947513812 2.058172865 0.132596685 0.184300341 0.339779006 293 17 2 343 3R:10403308-10403479 6 CG6325 FBtr0082260 10402965 10403647 AGTATT 6mer2-7 dme-miR-8-3p 3R - 10403309 10403472 3'utr CG6325 FlyBase G37774.1 AGTTTGCAAAACTCGATAAGGTTGCGTGCATCTAGTTCAGTTCTAAACACAAACAACGTGTGCTGTATTTAGTATTTAGTTACCTATACCTTACTTAGTGCAACGAAACGCTTTTCAAAAACATGAAACGCGTCCTTATTTCGACTGAAGTCATTTAAGTAATC 218 10403413 0.884402294 25 212 1702 0.975683891 1.728353782 0.170212766 0.366972477 0.580547112 218 3 5 321 3R:10403309-10403472 6 84.5 3499 FBgn0037814 441 14.70666667 22.57666667 0.191609977 5.745693563 3.742802303 12 11 11.5 0.01 dme-miR-965-3p 6mer2-7 ACGCTT 3R 10766310 10766315 + 3R_10766310_10766315_+ 0.990794318 0.996033337 0.993413827 0.003704532 Cap-H2 FBtr0301310|FBtr0302571|FBtr0301311 10765896|10765896|10765896 10766756|10766756|10766756 3R + 10766297 10766325 3'utr Cap-H2 FlyBase G41830.1 TTAACTTTTTACGACGCTTTTAGTTGCTT 5 10766317 0.684581017 3 5 56 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 3R:10766297-10766325 6 Cap-H2 FBtr0302571|FBtr0301311|FBtr0301310 10765896|10765896|10765896 10766756|10766756|10766756 ACGCTT 6mer2-7 dme-miR-965-3p 3R + 10766295 10766329 3'utr Cap-H2 FlyBase G31562.1 TTTTAACTTTTTACGACGCTTTTAGTTGCTTATGA 6 10766316 0.76784728 2 6 72 1 1.079181246 0.25 0.5 0.75 6 0 0 12 3R:10766295-10766329 6 5.5 3500 FBgn0037831 545.8533333 16.72666667 25.64 0.010075967 0.328816261 0.21450858 -7 -6 -6.5 0.01 dme-bantam-3p 7mer-m8 TGATCTC 3R 10766554 10766560 + 3R_10766554_10766560_+ 0.661615243 0.661615243 0.661615243 0 Cap-H2 FBtr0301310|FBtr0302571|FBtr0301311 10765896|10765896|10765896 10766756|10766756|10766756 3R + 10766449 10766688 stop_codon Cap-H2 FlyBase G41832.1 CTATACCTCCTTTGATTTAGAACAAAAATAGACAAATGACTTTTTGATTGACGAAGCGCGTGTTTTGGAAATCCTCATGAGCTGATAGTACTAAATTCAAGTACCTGATCTCGTCTGTACAAAAGTATAAACATAAGAACTCTTCGGACATAAGACAAAGTTCAAGATAAATTAAGGATAAAGTGTATATATACGTATGTATTTACCAGAGTGCAAGCTAGTGTCTATTTACAATCATTT 205 10766554 0.858930827 32 182 1387 0.881355932 1.363820826 0.233050847 0.131707317 0.245762712 205 20 8 208 3R:10766449-10766688 7 Cap-H2 FBtr0302571|FBtr0301311|FBtr0301310 10765896|10765896|10765896 10766756|10766756|10766756 TGATCTC 7mer-m8 dme-bantam-3p 3R + 10766467 10766744 stop_codon Cap-H2 FlyBase G31563.1 AGAACAAAAATAGACAAATGACTTTTTGATTGACGAAGCGCGTGTTTTGGAAATCCTCATGAGCTGATAGTACTAAATTCAAGTACCTGATCTCGTCTGTACAAAAGTATAAACATAAGAACTCTTCGGACATAAGACAAAGTTCAAGATAAATTAAGGATAAAGTGTATATATACGTATGTATTTACCAGAGTGCAAGCTAGTGTCTATTTACAATCATTTTAAGATATAATGTTTTTTTCGTAAGTATAACGTGTAGTTCTTAAGGAATAAAACGG 153 10766555 0.983348056 33 136 1043 0.8647343 1.349763044 0.173913043 0.287581699 0.473429952 153 21 7 179 3R:10766467-10766744 7 113.5 3501 FBgn0037831 545.8533333 16.72666667 25.64 0.207931312 6.785571941 4.426677067 0 -1 -0.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 10786616 10786621 - 3R_10786616_10786621_- 1 1 1 0 Art1 FBtr0082304 10786479 10786765 3R - 10786566 10786639 3'utr Art1 FlyBase G50013.1 TTCTCCTAAGTTTAAAGTGTACCTTTGTTAGTATACATAATATTTTACACTCGTGCGCCTGTTTAAATTATTAT 43 10786622 0.886610587 4 42 430 0.980392157 1.397940009 0.058823529 0.162790698 0.294117647 43 0 1 50 3R:10786566-10786639 6 Art1 FBtr0082304 10786479 10786765 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 10786566 10786684 3'utr Art1 FlyBase G37813.1 AAGGTTTATTCCAGTGCGAAATGTGCAACGAATTCGTGTTGCGTCTTCTCCTAAGTTTAAAGTGTACCTTTGTTAGTATACATAATATTTTACACTCGTGCGCCTGTTTAAATTATTAT 42 10786622 0.98844668 10 38 386 0.948275862 1.740362689 0.068965517 0.357142857 0.534482759 42 3 0 55 3R:10786566-10786684 6 36 3502 FBgn0037834 664.3333333 53.06 81.07333333 0.054189664 0.678477196 0.444042431 1 1 1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 10817146 10817151 + 3R_10817146_10817151_+ 1 1 1 0 CG4089 FBtr0082281|FBtr0082281|FBtr0082281 10817111|10817111|10817111 10817490|10817490|10817490 3R + 10817120 10817177 3'utr CG4089 FlyBase G41844.1 TAATTATCTTCTTATGTAAATACTTACTGTGACATGGTAACCTCTTATGCTCAGCATT 21 10817144 0.887322493 6 21 150 1 1.342422681 0.045454545 0.047619048 0.090909091 21 0 0 22 3R:10817120-10817177 6 CG4089 FBtr0082281|FBtr0082281|FBtr0082281 10817111|10817111|10817111 10817490|10817490|10817490 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 10817129 10817188 3'utr CG4089 FlyBase G31575.1 TCTTATGTAAATACTTACTGTGACATGGTAACCTCTTATGCTCAGCATTAGTTAATTGGC 19 10817144 0.982143272 9 19 132 1 1.491361694 0.225806452 0.421052632 0.64516129 19 0 0 31 3R:10817129-10817188 6 16.5 3503 FBgn0037838 56.27 3.373333333 5.153333333 0.293229074 4.891304348 3.201811125 2 2 2 0.01 dme-miR-184-3p 6mer2-7 CCGTCC 3R 10817322 10817327 + 3R_10817322_10817327_+ 1 1 1 0 CG4089 FBtr0082281 10817111 10817490 3R + 10817273 10817344 3'utr CG4089 FlyBase G41845.1 ATGGAAACCATCTAGACACTTTGGCAATGAAACATGTACAAATACAAAACCGTCCTTAAATTATTTTAAATT 44 10817328 0.700613459 10 41 237 0.964912281 1.740362689 0.087719298 0.25 0.421052632 44 2 0 55 3R:10817273-10817344 6 CG4089 FBtr0082281 10817111 10817490 CCGTCC 6mer2-7 dme-miR-184-3p 3R + 10817303 10817342 3'utr CG4089 FlyBase G31576.1 AACATGTACAAATACAAAACCGTCCTTAAATTATTTTAAA 33 10817328 0.645402574 5 30 144 0.960784314 1.213074825 0 0.393939394 0.607843137 33 0 2 49 3R:10817303-10817342 6 30 3504 FBgn0037838 56.27 3.373333333 5.153333333 0.533143771 8.893280632 5.821474774 -6 -6 -6 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 10856097 10856102 + 3R_10856097_10856102_+ 1 1 1 0 CG4511 FBtr0302202|FBtr0082286 10855766|10855766 10856412|10856412 3R + 10856080 10856121 3'utr CG4511 FlyBase G41852.2 TAAGCGAACTCAAAATTTGATCTTTATGGTATTTGCAATTCC 37 10856096 0.671803122 10 37 337 1 1.602059991 0.375 0.081081081 0.15 37 0 0 40 3R:10856080-10856121 6 CG4511 FBtr0302202|FBtr0082286 10855766|10855766 10856412|10856412 TGATCT 6mer3-8 dme-bantam-3p 3R + 10856072 10856115 3'utr CG4511 FlyBase G31583.1 AGCGAGCTTAAGCGAACTCAAAATTTGATCTTTATGGTATTTGC 31 10856096 0.945136748 7 31 256 1 1.69019608 0.183673469 0.419354839 0.632653061 31 0 0 49 3R:10856072-10856115 6 31.5 3505 FBgn0037843 1348.566667 118.0666667 181.7 0.023358133 0.266798419 0.173362686 1 1 1 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 10857909 10857914 + 3R_10857909_10857914_+ 1 1 1 0 CG4570 FBtr0082287 10857844 10858066 3R + 10857890 10857920 3'utr CG4570 FlyBase G41860.1 TTGAAAATAACGACGTTCATGATCTTGTTTA 12 10857909 0.681254338 4 12 101 1 1.278753601 0 0.416666667 0.631578947 12 0 0 19 3R:10857890-10857920 6 CG4570 FBtr0082287 10857844 10858066 TGATCT 6mer3-8 dme-bantam-3p 3R + 10857897 10857922 3'utr CG4570 FlyBase G31587.1 TAACGACGTTCATGATCTTGTTTAAT 8 10857917 0.572137203 4 8 65 1 1.113943352 0 0.25 0.538461538 8 0 0 13 3R:10857897-10857922 6 10 3506 FBgn0037844 66 6.4 9.756666667 0.151515152 1.5625 1.024940212 0 -8 -4 0.01 dme-miR-92b-3p 7mer-A1 TGCAATA 3R 10870323 10870329 + 3R_10870323_10870329_+ 0.782911824 0.782911824 0.782911824 0 Tsp86D FBtr0330150|FBtr0082288 10870039|10869964 10870555|10870555 3R + 10870258 10870368 3'utr Tsp86D FlyBase G41868.1 AAACGTCAGCGCATTCTTAGTCACAAGTAAAGTCGAACACATCTAAAGTTTTACTCTTATACGTATGCAATATCAGACTATTTAAAAGACACTTGTGTATAAGCTAGCGAG 22 10870338 0.968045905 7 22 128 1 1.447158031 0.357142857 0.272727273 0.428571429 22 0 0 28 3R:10870258-10870368 7 Tsp86D FBtr0082288|FBtr0330150 10869964|10870039 10870555|10870555 TGCAATA 7mer-A1 dme-miR-92b-3p 3R + 10870286 10870434 3'utr Tsp86D FlyBase G31594.1 AAAGTCGAACACATCTAAAGTTTTACTCTTATACGTATGCAATATCAGACTATTTAAAAGACACTTGTGTATAAGCTAGCGAGTTCCATAAGAAATATGCATTTAAAATGAGATTTATATGTAACGACGAAACCAAAACTGCATGCATG 38 10870338 0.979473894 19 36 243 0.964912281 1.740362689 0.280701754 0.394736842 0.596491228 38 2 0 55 3R:10870286-10870434 7 11 3507 FBgn0037848 356.0066667 24.29333333 37.27666667 0.030898298 0.452799122 0.295090763 -15 -15 -15 0.01 dme-miR-980-5p 8mer-A1 GAAAAACA 3R 10870446 10870453 + 3R_10870446_10870453_+ 0.639886926 0.639886926 0.639886926 0 Tsp86D FBtr0330150|FBtr0082288 10870039|10869964 10870555|10870555 3R + 10870373 10870489 3'utr Tsp86D FlyBase G41869.1 ATAAGAAATATGCATTTAAAATGAGATTTATATGTAACGACGAAACCAAAACTGCATGCATGTTTGTTAAATTGAAAAACATACTAGATACATAGACTTATTATCATTTTTAAGTAT 133 10870465 0.883435511 19 127 999 0.967948718 1.877946952 0.038461538 0.15037594 0.275641026 133 4 1 151 3R:10870373-10870489 8 Tsp86D FBtr0082288|FBtr0330150 10869964|10870039 10870555|10870555 GAAAAACA 8mer-A1 dme-miR-980-5p 3R + 10870444 10870516 3'utr Tsp86D FlyBase G31595.1 TTGAAAAACATACTAGATACATAGACTTATTATCATTTTTAAGTATCTGTACGCGTGTTTGTCTGCAAACGTT 91 10870465 0.822306754 7 88 662 0.977777778 1.819543936 0.022222222 0.32967033 0.548148148 91 2 1 132 3R:10870444-10870516 8 30 3508 FBgn0037848 356.0066667 24.29333333 37.27666667 0.084268085 1.234906696 0.804792989 -19 -19 -19 0.01 dme-miR-995-5p 6mer2-7 ATTCGG 3R 10879726 10879731 - 3R_10879726_10879731_- 1 0.999998038 0.999999019 1.41E-06 Tpc1 FBtr0082333|FBtr0082334 10879570|10879570 10880005|10880005 3R - 10879692 10879903 3'utr Tpc1 FlyBase G50033.1 AAATAATATTAAGACTTAGGCTAACTCTGTTGATTAGTTTTCGGTTGTGCGTATCTTTTCTGGGGGTTCTGTTTATCATAGACCAATTGACTTGGTCAGCGCTTTAGTACACACACGAATAGTTGGCGCACCAGTTAAGTTATAGATTGTATGTGCTAGGTTGTAGTTCATTATTCGGCAGAGCACCTCTATTCACAGACACATTCAAATTT 29 10879714 0.982539805 18 27 212 0.941176471 1.505149978 0.235294118 0.137931034 0.264705882 29 2 0 32 3R:10879692-10879903 6 Tpc1 FBtr0082333|FBtr0082334 10879570|10879570 10880005|10880005 ATTCGG 6mer2-7 dme-miR-995-5p 3R - 10879667 10879730 3'utr Tpc1 FlyBase G37824.1 TTCGGCAGAGCACCTCTATTCACAGACACATTCAAATTTTTATTTATCTTTTGTTTGATTCGCA 6 10879712 0.982861579 4 5 44 0.857142857 0.77815125 0 0.166666667 0.285714286 6 1 0 6 3R:10879667-10879730 5 8 3509 FBgn0037852 341.8033333 20.23333333 31.12 0.023405272 0.39538715 0.257069409 -17 -19 -18 0.01 dme-miR-932-5p 7mer-m8 GGAATTG 3R 10889820 10889826 - 3R_10889820_10889826_- 0.70297287 0.70297287 0.70297287 0 CG6621 FBtr0082329|FBtr0302935 10889766|10889766 10889914|10889914 3R - 10889769 10889837 3'utr CG6621 FlyBase G50052.1 CGCTCCCTTTGGGAATTGTTCATTGGTCACTAAATAAAGAAGCTTGCGAAGCGAATTTATTACAAACTA 29 10889814 0.986960234 6 29 251 1 1.544068044 0.228571429 0.206896552 0.342857143 29 0 0 35 3R:10889769-10889837 7 CG6621 FBtr0082329|FBtr0302935 10889766|10889766 10889914|10889914 GGAATTG 7mer-m8 dme-miR-932-5p 3R - 10889782 10889836 3'utr CG6621 FlyBase G37846.1 GCTCCCTTTGGGAATTGTTCATTGGTCACTAAATAAAGAAGCTTGCGAAGCGAAT 19 10889814 0.804227459 4 17 140 0.892857143 1.096910013 0.178571429 0.368421053 0.571428571 19 2 1 25 3R:10889782-10889836 7 21 3510 FBgn0037855 205.6666667 8.096666667 12.54 0.102106969 2.593659942 1.674641148 -12 -12 -12 0.01 dme-miR-79-3p 6mer2-7 AGCTTT 3R 10895276 10895281 + 3R_10895276_10895281_+ 1 1 1 0 Leash FBtr0082325 10895233 10896418 3R + 10895253 10895299 3'utr Leash FlyBase G41874.1 GAGCAGCCATCCAGTTACGTCCAAGCTTTGCCTAGACATAGAGCTTC 59 10895267 0.754942669 6 55 285 0.914285714 1.329058719 0.3 0.118644068 0.257142857 59 4 2 64 3R:10895253-10895299 6 Leash FBtr0082325 10895233 10896418 AGCTTT 6mer2-7 dme-miR-79-3p 3R + 10895253 10895314 3'utr Leash FlyBase G31599.1 GAGCAGCCATCCAGTTACGTCCAAGCTTTGCCTAGACATAGAGCTTCAGGTTTACTTTATAG 37 10895267 0.968691585 6 33 193 0.927272727 1.40654018 0.218181818 0.297297297 0.527272727 37 3 1 51 3R:10895253-10895314 6 46.5 3511 FBgn0037856 180.5566667 6.93 10.65333333 0.257536877 6.70995671 4.364831039 9 9 9 0.01 dme-miR-965-3p 7mer-m8 TACGCTT 3R 10895356 10895362 + 3R_10895356_10895362_+ 0.620204855 0.620204855 0.620204855 0 Leash FBtr0082325 10895233 10896418 3R + 10895340 10895443 3'utr Leash FlyBase G41875.1 TATATCCTAGACCTTCTACGCTTCGAGCACAAACCATATGCAAATTGTGCACAAATCAAGTTATACGCTGATATACCCTATTTATGTTTACCTTTGATTTCACC 39 10895356 0.848308308 12 37 240 0.941176471 1.204119983 0.058823529 0.205128205 0.392156863 39 1 2 48 3R:10895340-10895443 7 Leash FBtr0082325 10895233 10896418 TACGCTT 7mer-m8 dme-miR-965-3p 3R + 10895339 10895376 3'utr Leash FlyBase G31600.1 ATATATCCTAGACCTTCTACGCTTCGAGCACAAACCAT 17 10895356 0.950258499 3 17 84 1 1.380211242 0.291666667 0.235294118 0.458333333 17 0 0 24 3R:10895339-10895376 7 21 3512 FBgn0037856 180.5566667 6.93 10.65333333 0.116306977 3.03030303 1.971214018 0 0 0 0.01 dme-miR-190-5p 6mer3-8 ACATAT 3R 10895928 10895933 + 3R_10895928_10895933_+ 1 1 1 0 Leash FBtr0082325 10895233 10896418 3R + 10895874 10895955 3'utr Leash FlyBase G41876.1 TGCGAATTACTCAAAGACTCATGAGTATTTATGTCACCACTCACTATACTCGAAACATATTTCCTGCCCGCCTATTTATCTT 61 10895934 0.833636204 6 58 343 0.962962963 1.892094603 0.024691358 0.245901639 0.432098765 61 3 0 78 3R:10895874-10895955 6 Leash FBtr0082325 10895233 10896418 ACATAT 6mer3-8 dme-miR-190-5p 3R + 10895904 10895951 3'utr Leash FlyBase G31602.1 ATGTCACCACTCACTATACTCGAAACATATTTCCTGCCCGCCTATTTA 25 10895934 0.964025455 4 25 131 1 1.612783857 0 0.56 0.731707317 25 0 0 41 3R:10895904-10895951 6 37.5 3513 FBgn0037856 180.5566667 6.93 10.65333333 0.20769103 5.411255411 3.520025031 -6 -6 -6 0.01 dme-miR-79-3p 7mer-A1 AGCTTTA 3R 10896174 10896180 + 3R_10896174_10896180_+ 0.823349562 0.823349562 0.823349562 0 Leash FBtr0082325 10895233 10896418 3R + 10896148 10896196 3'utr Leash FlyBase G41878.1 AGACGCGAAGAATCAATGAATCAATAAGCTTTAGTGCCTCTGTATGATG 62 10896172 0.889442763 3 61 445 0.984848485 1.812913357 0.575757576 0.064516129 0.121212121 62 1 0 65 3R:10896148-10896196 7 Leash FBtr0082325 10895233 10896418 AGCTTTA 7mer-A1 dme-miR-79-3p 3R + 10896149 10896199 3'utr Leash FlyBase G31604.1 GACGCGAAGAATCAATGAATCAATAAGCTTTAGTGCCTCTGTATGATGAAC 33 10896172 0.886276381 5 33 243 1 1.672097858 0.446808511 0.333333333 0.531914894 33 0 0 47 3R:10896149-10896199 7 47 3514 FBgn0037856 180.5566667 6.93 10.65333333 0.26030609 6.782106782 4.411764706 2 2 2 0.01 "dme-miR-995-3p,dme-miR-998-3p" 6mer2-7 GGTGCT 3R 10896323 10896328 + 3R_10896323_10896328_+ 1 1 1 0 Leash FBtr0082325 10895233 10896418 3R + 10896302 10896340 3'utr Leash FlyBase G41879.1 ACGATCAAACGATTTCGTTAAGGTGCTTTACAAATCACT 18 10896329 0.764825833 2 16 138 0.869565217 0.823908741 0.086956522 0.277777778 0.434782609 18 1 2 20 3R:10896302-10896340 6 Leash FBtr0082325 10895233 10896418 GGTGCT 6mer2-7 "dme-miR-995-3p,dme-miR-998-3p" 3R + 10896302 10896337 3'utr Leash FlyBase G31605.1 ACGATCAAACGATTTCGTTAAGGTGCTTTACAAATC 13 10896329 0.936913917 3 12 109 0.857142857 0.653212514 0 0.538461538 0.714285714 13 0 3 18 3R:10896302-10896337 6 15 3515 FBgn0037856 180.5566667 6.93 10.65333333 0.083076412 2.164502165 1.408010013 -6 -6 -6 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 11170840 11170845 - 3R_11170840_11170845_- 1 1 1 0 Ugt35a FBtr0082374|FBtr0082374|FBtr0082374 11170815|11170815|11170815 11170943|11170943|11170943 3R - 11170826 11170880 3'utr Ugt35a FlyBase G50060.1 AGTAAACATTTGCATTTTTGTTTTGTTACCAGCACCTGTGAATTAATTTTTAAAT 37 11170838 0.983040076 7 36 297 0.976190476 1.311753861 0.357142857 0.135135135 0.238095238 37 0 1 41 3R:11170826-11170880 6 Ugt35a FBtr0082374|FBtr0082374|FBtr0082374 11170815|11170815|11170815 11170943|11170943|11170943 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 11170825 11170924 3'utr Ugt35a FlyBase G37853.1 TGTTTGAGTTCATGCCGCCACCGACTTATGTTTCCTCTTAGAGCAGTAAACATTTGCATTTTTGTTTTGTTACCAGCACCTGTGAATTAATTTTTAAATA 34 11170838 0.755976696 10 34 246 1 1.698970004 0.34 0.382352941 0.58 34 0 0 50 3R:11170825-11170924 6 28.5 3516 FBgn0026315 870 59.03666667 89.87 0.032758621 0.482750833 0.317124736 -7 -7 -7 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 11212513 11212518 - 3R_11212513_11212518_- 1 1 1 0 ZnT86D FBtr0082371 11212306 11212867 3R - 11212499 11212537 3'utr ZnT86D FlyBase G50069.1 AAGCTAAGCGAAAGATTTTGTGCAAAGGTAAATATAAAT 7 11212520 0.839247432 3 6 35 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 3R:11212499-11212537 6 ZnT86D FBtr0082371 11212306 11212867 GTGCAA 6mer3-8 dme-miR-92b-3p 3R - 11212509 11212550 3'utr ZnT86D FlyBase G37860.1 TTAGTGTAATTGTAAGCTAAGCGAAAGATTTTGTGCAAAGGT 6 11212520 0.622986519 4 6 33 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 3R:11212509-11212550 6 4.5 3517 FBgn0037875 198.6666667 12.00333333 18.26333333 0.022651007 0.374895862 0.246395328 2 2 2 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 11212826 11212831 - 3R_11212826_11212831_- 1 1 1 0 ZnT86D FBtr0082371 11212306 11212867 3R - 11212811 11212859 3'utr ZnT86D FlyBase G50071.1 GGATCGACCCACCGGTGTCCTTGTACAATGATCTGTATAGTTATCAGCG 27 11212831 0.987790576 6 26 247 0.965517241 1.447158031 0.206896552 0.074074074 0.137931034 27 1 0 28 3R:11212811-11212859 6 ZnT86D FBtr0082371 11212306 11212867 TGATCT 6mer3-8 dme-bantam-3p 3R - 11212812 11212859 3'utr ZnT86D FlyBase G37862.1 GGATCGACCCACCGGTGTCCTTGTACAATGATCTGTATAGTTATCAGC 23 11212831 0.989071878 6 19 185 0.838709677 1.113943352 0.225806452 0.260869565 0.451612903 23 4 1 26 3R:11212812-11212859 6 24.5 3518 FBgn0037875 198.6666667 12.00333333 18.26333333 0.123322148 2.041099695 1.341485673 0 0 0 0.01 dme-miR-2a-2-5p 7mer-m1 GATGAGG 3R 11223253 11223259 + 3R_11223253_11223259_+ 0.825582373 0.825582373 0.825582373 0 RpL3 FBtr0302586 11223138 11224944 3R + 11223193 11223269 3'utr RpL3 FlyBase G41912.1 AAATTGCCTGACGAGTGAGCATGACAAGGAAGACTGCATCTCCGCTCGCCATTCGTTTGCGATGAGGCGCACTTCCT 10 11223249 0.95222705 7 10 48 1 1.113943352 0.076923077 0.3 0.461538462 10 0 0 13 3R:11223193-11223269 7 RpL3 FBtr0302586 11223138 11224944 GATGAGG 7mer-m1 dme-miR-2a-2-5p 3R + 11223223 11223264 3'utr RpL3 FlyBase G31633.1 AGACTGCATCTCCGCTCGCCATTCGTTTGCGATGAGGCGCAC 7 11223249 0.966904424 4 7 36 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 3R:11223223-11223264 7 6 3519 FBgn0020910 9247.463333 756.2966667 1140.143333 0.000648827 0.007933395 0.005262496 4 4 4 0.01 dme-bantam-3p 7mer-m8 TGATCTC 3R 11223446 11223452 + 3R_11223446_11223452_+ 0.661615243 0.661615243 0.661615243 0 RpL3 FBtr0302586 11223138 11224944 3R + 11223399 11223529 3'utr RpL3 FlyBase G41913.1 AAGAGCAAGAAGAAGGCATTCACCAAGGCCAGCAAGAAGTGGACCGATGATCTCGGCAAGAAGAGCATCGAGAATGACTTCCGCAAGATGCTGCGCTACTGCAAGGTGATCCGTGTGATTGCCCACTCGCA 144 11223446 0.92949195 14 142 493 0.988372093 1.929418926 0.168604651 0.166666667 0.302325581 144 1 1 170 3R:11223399-11223529 7 RpL3 FBtr0302586 11223138 11224944 TGATCTC 7mer-m8 dme-bantam-3p 3R + 11223422 11223530 3'utr RpL3 FlyBase G31634.1 CAAGGCCAGCAAGAAGTGGACCGATGATCTCGGCAAGAAGAGCATCGAGAATGACTTCCGCAAGATGCTGCGCTACTGCAAGGTGATCCGTGTGATTGCCCACTCGCAG 97 11223446 0.928367373 12 95 360 0.978571429 2.136720567 0.307142857 0.329896907 0.535714286 97 3 0 137 3R:11223422-11223530 7 89.5 3520 FBgn0020910 9247.463333 756.2966667 1140.143333 0.00967833 0.118339805 0.078498902 0 0 0 0.01 dme-miR-7-5p 6mer3-8 GTCTTC 3R 11223984 11223989 + 3R_11223984_11223989_+ 1 1 1 0 RpL3 FBtr0302586 11223138 11224944 3R + 11223922 11224018 3'utr RpL3 FlyBase G41914.1 CCATCGAGGACAAGGTCAAGTGGGCTCGCGAGCATTTGGAGAAGCCCATCCAGGTCAGCAACGTCTTCGGCCAGGACGAGATGATCGACTGCGTTGG 39 11224004 0.940404484 12 37 148 0.930232558 1.301029996 0.534883721 0.102564103 0.186046512 39 2 1 40 3R:11223922-11224018 6 RpL3 FBtr0302586 11223138 11224944 GTCTTC 6mer3-8 dme-miR-7-5p 3R + 11223927 11224021 3'utr RpL3 FlyBase G31635.1 GAGGACAAGGTCAAGTGGGCTCGCGAGCATTTGGAGAAGCCCATCCAGGTCAGCAACGTCTTCGGCCAGGACGAGATGATCGACTGCGTTGGTGT 23 11223987 0.738172391 13 21 79 0.965517241 1.447158031 0.551724138 0.260869565 0.413793103 23 1 0 28 3R:11223927-11224021 6 11.5 3521 FBgn0020910 9247.463333 756.2966667 1140.143333 0.001243584 0.015205673 0.010086451 -20 -3 -11.5 0.01 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3R 11224118 11224123 + 3R_11224118_11224123_+ 1 1 1 0 RpL3 FBtr0302586 11223138 11224944 3R + 11224093 11224143 3'utr RpL3 FlyBase G41916.1 AGGGTCTGCGCAAGGTGGCCTGTATTGGTGCCTGGCATCCGTCGCGTGTGT 10 11224118 0.724960622 7 10 61 1 1.041392685 0.272727273 0.1 0.181818182 10 0 0 11 3R:11224093-11224143 6 RpL3 FBtr0302586 11223138 11224944 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3R + 11224099 11224170 3'utr RpL3 FlyBase G31636.1 TGCGCAAGGTGGCCTGTATTGGTGCCTGGCATCCGTCGCGTGTGTCCACCACCGTGGCCCGTGCCGGTCAGA 14 11224118 0.980073277 6 12 83 0.863636364 1.278753601 0.181818182 0.428571429 0.636363636 14 3 0 19 3R:11224099-11224170 6 10 3522 FBgn0020910 9247.463333 756.2966667 1140.143333 0.001081378 0.013222325 0.008770827 0 0 0 0.01 dme-miR-988-3p 6mer2-7 CAAGGG 3R 11224598 11224603 + 3R_11224598_11224603_+ 1 1 1 0 RpL3 FBtr0302586 11223138 11224944 3R + 11224497 11224653 3'utr RpL3 FlyBase G41920.1 AAGAACAACGCCTCCACCGAGTACGATCTGACCGACAAGAGCATCACGCCCATGGGTGGCTTCCCCCACTACGGTGAGGTCAACAACGACTTCGTCATGATCAAGGGCTGCTGCATCGGCTCCAAGAAGCGCATCATCACCCTGCGCAAGTCCCTGC 53 11224594 0.902783806 16 45 251 0.859649123 1.088136089 0.210526316 0.075471698 0.140350877 53 5 3 49 3R:11224497-11224653 6 RpL3 FBtr0302586 11223138 11224944 CAAGGG 6mer2-7 dme-miR-988-3p 3R + 11224533 11224658 3'utr RpL3 FlyBase G31639.1 AAGAGCATCACGCCCATGGGTGGCTTCCCCCACTACGGTGAGGTCAACAACGACTTCGTCATGATCAAGGGCTGCTGCATCGGCTCCAAGAAGCGCATCATCACCCTGCGCAAGTCCCTGCTGAAG 27 11224594 0.827723025 9 23 121 0.853658537 0.942008053 0.56097561 0.37037037 0.585365854 27 3 3 35 3R:11224533-11224658 6 18.5 3523 FBgn0020910 9247.463333 756.2966667 1140.143333 0.002000549 0.0244613 0.01622603 4 4 4 0.01 dme-miR-980-3p 6mer3-8 GGCAGC 3R 11224911 11224916 + 3R_11224911_11224916_+ 1 1 1 0 RpL3 FBtr0336783 11224849 11225173 3R + 11224849 11225005 stop_codon RpL3 FlyBase G41923.1 AAACAAAATGTCGTGTCCGCGTTCAATTGTCTGCTCGCTTCTACCACCAACTGCTGCGGTAGGGCAGCGATCAATAAACAGATTTTGGCTAAGCTGACTCATTAATCTTTTCAATTGCATCTAATGGGAAAAGACCACGTCACAGATTTTACAATCG 54 11224932 0.985670351 19 48 382 0.890625 1.45484486 0.234375 0.148148148 0.28125 54 6 1 57 3R:11224849-11225005 6 RpL3 FBtr0302586|FBtr0336783 11223138|11224849 11224944|11225173 GGCAGC 6mer3-8 dme-miR-980-3p 3R + 11224852 11225005 3'utr RpL3 FlyBase G31641.1 CAAAATGTCGTGTCCGCGTTCAATTGTCTGCTCGCTTCTACCACCAACTGCTGCGGTAGGGCAGCGATCAATAAACAGATTTTGGCTAAGCTGACTCATTAATCTTTTCAATTGCATCTAATGGGAAAAGACCACGTCACAGATTTTACAATCG 37 11224903 0.826800289 15 34 252 0.918367347 1.352182518 0.244897959 0.27027027 0.448979592 37 3 1 45 3R:11224852-11225005 6 8.5 3524 FBgn0020910 9247.463333 756.2966667 1140.143333 0.000919171 0.011238976 0.007455203 -21 8 -6.5 0.01 dme-miR-980-3p 6mer2-7 GCAGCT 3R 11230719 11230724 - 3R_11230719_11230724_- 1 1 1 0 CG17187 FBtr0082365 11230615 11230808 3R - 11230701 11230738 3'utr CG17187 FlyBase G50088.1 AATTTAGCAACTATGCAGCTGATTTATAATACATTTAC 22 11230726 0.833959911 4 22 145 1 1.556302501 0 0.363636364 0.611111111 22 0 0 36 3R:11230701-11230738 6 CG17187 FBtr0082365 11230615 11230808 GCAGCT 6mer2-7 dme-miR-980-3p 3R - 11230709 11230738 3'utr CG17187 FlyBase G37874.1 AATTTAGCAACTATGCAGCTGATTTATAAT 28 11230726 0.78404609 5 28 170 1 1.62324929 0 0.321428571 0.547619048 28 0 0 42 3R:11230709-11230738 6 25 3525 FBgn0037882 159.3333333 15.59 23.78333333 0.156903766 1.603592046 1.051156272 2 2 2 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3R 11232501 11232507 - 3R_11232501_11232507_- 0.823349562 0.823349562 0.823349562 0 Arfip FBtr0082364 11232427 11233081 3R - 11232455 11232538 3'utr Arfip FlyBase G50091.1 CGAGCTTGCATAATTTGAAATCATTGTTTTACTAGTCATCGTATTATTTACACTAAAATGAAGTCTATATATATATAAAAATAT 59 11232511 0.825922262 16 53 630 0.922077922 1.851258349 0.077922078 0.271186441 0.441558442 59 6 0 71 3R:11232455-11232538 7 Arfip FBtr0082364 11232427 11233081 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R - 11232460 11232550 3'utr Arfip FlyBase G37877.1 AAACTGTTTTTGCGAGCTTGCATAATTTGAAATCATTGTTTTACTAGTCATCGTATTATTTACACTAAAATGAAGTCTATATATATATAAA 54 11232510 0.800969827 19 47 529 0.91011236 1.607455023 0.224719101 0.462962963 0.674157303 54 7 1 81 3R:11232460-11232550 7 43.5 3526 FBgn0037884 616.2333333 37.68 58.01666667 0.070590144 1.154458599 0.749784545 4 3 3.5 0.01 dme-miR-968-5p 6mer3-8 ACTACT 3R 11232764 11232769 - 3R_11232764_11232769_- 1 1 1 0 Arfip FBtr0082364 11232427 11233081 3R - 11232724 11232783 3'utr Arfip FlyBase G50094.1 ATGTAACTCGCTGTACTACTCACATTTCCACAGCTGGTACGCTGACGTTCCTTTAACTTG 8 11232760 0.963007183 6 7 57 0.875 0.84509804 0 0 0 8 1 0 7 3R:11232724-11232783 6 Arfip FBtr0082364 11232427 11233081 ACTACT 6mer3-8 dme-miR-968-5p 3R - 11232759 11232800 3'utr Arfip FlyBase G37879.1 CAACCGCTTTCCATTGTATGTAACTCGCTGTACTACTCACAT 7 11232772 0.976346405 3 6 43 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3R:11232759-11232800 6 5.5 3527 FBgn0037884 616.2333333 37.68 58.01666667 0.008925191 0.14596603 0.094800345 -9 3 -3 0.01 dme-miR-8-3p 6mer3-8 CAGTAT 3R 11232927 11232932 - 3R_11232927_11232932_- 1 1 1 0 Arfip FBtr0082364 11232427 11233081 3R - 11232808 11232954 3'utr Arfip FlyBase G50095.1 AAGATCGGTGGCAGAGATGATTCAGTATGCGATGCAGTGGACAGAAACACTGCATGGCGAACCATAACAATATTTTCGTGCTAAGTTTAAGTCGAATTCCTAAGCCGTAAGCAGAAAGTGAGAGTGGTAGGTGTATGTTATTTATAT 83 11232934 0.979877153 13 74 527 0.888888889 1.903089987 0.3 0.084337349 0.155555556 83 10 0 80 3R:11232808-11232954 6 Arfip FBtr0082364 11232427 11233081 CAGTAT 6mer3-8 dme-miR-8-3p 3R - 11232876 11232953 3'utr Arfip FlyBase G37880.1 AGATCGGTGGCAGAGATGATTCAGTATGCGATGCAGTGGACAGAAACACTGCATGGCGAACCATAACAATATTTTCGT 66 11232934 0.981257469 8 58 418 0.894117647 1.403692338 0.552941176 0.212121212 0.388235294 66 7 2 76 3R:11232876-11232953 6 66 3528 FBgn0037884 616.2333333 37.68 58.01666667 0.107102288 1.751592357 1.137604137 2 2 2 0.01 dme-miR-283-5p 8mer-A1 TGATATTA 3R 11240079 11240086 + 3R_11240079_11240086_+ 0.592179285 0.592192292 0.592185788 9.19E-06 CG31388 FBtr0304709|FBtr0082356 11238876|11240036 11240114|11240114 3R + 11240051 11240114 3'utr CG31388 FlyBase G41936.1 AGTTGCATGTTAATTATATATACCGAATTGATATTAATAAAGCTTCCGTTCCGCGTTCATGTTT 28 11240078 0.856489537 4 26 256 0.931034483 1.431363764 0.103448276 0.035714286 0.068965517 28 2 0 27 3R:11240051-11240114 8 CG31388 FBtr0082356|FBtr0304709 11240036|11238876 11240114|11240114 TGATATTA 8mer-A1 dme-miR-283-5p 3R + 11240051 11240109 3'utr CG31388 FlyBase G31650.1 AGTTGCATGTTAATTATATATACCGAATTGATATTAATAAAGCTTCCGTTCCGCGTTCA 20 11240078 0.981645834 2 20 150 1 1.531478917 0.323529412 0.5 0.705882353 20 0 0 34 3R:11240051-11240109 8 22.5 3529 FBgn0051388 90 7.313333333 11.29666667 0.25 3.07657247 1.991737976 1 1 1 0.01 dme-miR-283-5p 7mer-m8 TGATATT 3R 11242319 11242325 - 3R_11242319_11242325_- 0.620199262 0.620181368 0.620190315 1.27E-05 CG17734 FBtr0082361|FBtr0082360|FBtr0308073 11242206|11242206|11242206 11242819|11242541|11243554 3R - 11242263 11242351 3'utr CG17734 FlyBase G50101.2 CAGTTTTGTAAACCTGCGTAAGATTGTGATATTGTGTGTTTTAATGTACAAGTTGAACATCCAAACGAAAGCTGTCGAAGCAGACGACA 85 11242328 0.97097103 9 79 680 0.920353982 1.318063335 0.513274336 0.282352941 0.460176991 85 5 4 104 3R:11242263-11242351 7 CG17734 FBtr0308073|FBtr0082360|FBtr0082361 11242206|11242206|11242206 11243554|11242541|11242819 TGATATT 7mer-m8 dme-miR-283-5p 3R - 11242305 11242343 3'utr CG17734 FlyBase G37885.1 TAAACCTGCGTAAGATTGTGATATTGTGTGTTTTAATGT 47 11242328 0.702732431 7 44 389 0.914285714 1.329058719 0.428571429 0.446808511 0.628571429 47 4 2 64 3R:11242305-11242343 7 63 3530 FBgn0037890 228.3333333 38.00666667 58.52666667 0.275912409 1.657603929 1.076432395 3 3 3 0.01 dme-miR-184-3p 7mer-A1 CCGTCCA 3R 11346916 11346922 - 3R_11346916_11346922_- 0.823349562 0.823349562 0.823349562 0 KP78a FBtr0301426 11346292 11348527 3R - 11346893 11346940 5'utr KP78a FlyBase G50107.1 AATCCCAGACGTTCCGAGCCGTCCAGCATTCCACAATCTGCGATGCCC 7 11346929 0.89716536 3 7 22 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 3R:11346893-11346940 7 KP78a FBtr0301426 11346292 11348527 CCGTCCA 7mer-A1 dme-miR-184-3p 3R - 11346890 11346940 5'utr KP78a FlyBase G37889.1 AATCCCAGACGTTCCGAGCCGTCCAGCATTCCACAATCTGCGATGCCCAAG 6 11346928 0.945607173 3 6 24 1 1.041392685 0.090909091 0.333333333 0.636363636 6 0 0 11 3R:11346890-11346940 7 5.5 3531 FBgn0026064 259.0966667 6.236666667 9.53 0.021227598 0.881881347 0.577124869 7 6 6.5 0.01 dme-miR-184-5p 6mer3-8 TGATAA 3R 11348467 11348472 - 3R_11348467_11348472_- 1 1 1 0 KP78a FBtr0301426 11346292 11348527 3R - 11348429 11348519 5'utr KP78a FlyBase G50109.1 CGGGTTGTTTGGGGCAATGTCAAGGTGATAGAGATAGAATGATAGAGTGATAAAGAAAGTGATACAGTCGGCCCTGACCGAGCATTCTAAC 42 11348445 0.962122559 11 34 173 0.803921569 1.135662602 0.215686275 0.214285714 0.352941176 42 8 2 41 3R:11348429-11348519 6 KP78a FBtr0301426 11346292 11348527 TGATAA 6mer3-8 dme-miR-184-5p 3R - 11348434 11348509 5'utr KP78a FlyBase G37890.1 GGGGCAATGTCAAGGTGATAGAGATAGAATGATAGAGTGATAAAGAAAGTGATACAGTCGGCCCTGACCGAGCATT 40 11348474 0.96677576 9 30 159 0.803278689 1.213074825 0.295081967 0.4 0.606557377 40 10 2 49 3R:11348434-11348509 6 28 3532 FBgn0026064 259.0966667 6.236666667 9.53 0.108067774 4.489577766 2.938090241 -27 2 -12.5 0.01 dme-miR-184-5p 6mer3-8 TGATAA 3R 11412301 11412306 + 3R_11412301_11412306_+ 1 1 1 0 Irbp FBtr0334308 11411280 11412440 3R + 11412261 11412356 stop_codon Irbp FlyBase G41952.1 GAGGAACTACATAAGTAATTAAAATATTCCATACTTTGAGTGATAAATCTGTACCAATCTAGCTTGTATTAACCATTGGTAAACTTAGGATTAGAA 46 11412297 0.984122305 13 45 354 0.983050847 1.763427994 0.050847458 0.239130435 0.406779661 46 1 0 58 3R:11412261-11412356 6 Irbp FBtr0334308|FBtr0082385 11411280|11412277 11412440|11412440 TGATAA 6mer3-8 dme-miR-184-5p 3R + 11412283 11412358 3'utr Irbp FlyBase G31660.1 AATATTCCATACTTTGAGTGATAAATCTGTACCAATCTAGCTTGTATTAACCATTGGTAAACTTAGGATTAGAAAA 25 11412296 0.749622771 12 25 203 1 1.612783857 0.024390244 0.44 0.658536585 25 0 0 41 3R:11412283-11412358 6 26 3533 FBgn0011774 334.55 19.15333333 29.45333333 0.077716335 1.357466063 0.882752377 4 5 4.5 0.01 dme-miR-8-3p 6mer2-7 AGTATT 3R 11429846 11429851 + 3R_11429846_11429851_+ 1 0.999986138 0.999993069 9.83E-06 CG5270 FBtr0082387 11429538 11429969 3R + 11429819 11429882 3'utr CG5270 FlyBase G41990.1 AATTTTAATCTTTCCAAAGGGCCAGCAAGTATTCCACCCTCCAGCTCAAAAAGACTCTCCCAGC 30 11429850 0.847737556 5 28 120 0.911764706 1.190331698 0.029411765 0.133333333 0.235294118 30 2 1 31 3R:11429819-11429882 6 CG5270 FBtr0082387 11429538 11429969 AGTATT 6mer2-7 dme-miR-8-3p 3R + 11429819 11429905 3'utr CG5270 FlyBase G31682.1 AATTTTAATCTTTCCAAAGGGCCAGCAAGTATTCCACCCTCCAGCTCAAAAAGACTCTCCCAGCATGTAACCAAATTATATTATTGA 33 11429875 0.783169605 7 30 138 0.930232558 1.301029996 0.255813953 0.272727273 0.441860465 33 2 1 40 3R:11429819-11429905 6 14 3534 FBgn0037897 445.6566667 7.17 10.97666667 0.031414317 1.952580195 1.275432736 -4 -29 -16.5 0.01 "dme-miR-995-3p,dme-miR-998-3p" 6mer2-7 GGTGCT 3R 11433335 11433340 + 3R_11433335_11433340_+ 1 1 1 0 CG5276 FBtr0082390|FBtr0339375 11433291|11433291 11433543|11433543 3R + 11433308 11433352 3'utr CG5276 FlyBase G41994.1 TACCGCACTCCACTCTACTTCGATCCAGGTGCTTCAGTTTTAAAC 11 11433341 0.728153576 5 11 77 1 1.113943352 0.615384615 0.090909091 0.230769231 11 0 0 13 3R:11433308-11433352 6 CG5276 FBtr0082390|FBtr0339375 11433291|11433291 11433543|11433543 GGTGCT 6mer2-7 "dme-miR-995-3p,dme-miR-998-3p" 3R + 11433324 11433352 3'utr CG5276 FlyBase G31684.1 ACTTCGATCCAGGTGCTTCAGTTTTAAAC 5 11433341 0.75996981 2 5 32 1 0.84509804 0.571428571 0.4 0.571428571 5 0 0 7 3R:11433324-11433352 6 8 3535 FBgn0037900 117.3333333 8.9 13.58333333 0.068181818 0.898876404 0.588957055 -6 -6 -6 0.01 dme-miR-2535b-3p 6mer3-8 CCGTGA 3R 11433441 11433446 + 3R_11433441_11433446_+ 1 1 1 0 CG5276 FBtr0082390|FBtr0339375 11433291|11433291 11433543|11433543 3R + 11433355 11433481 3'utr CG5276 FlyBase G41995.1 GTACATATTGTATTATTGTCCCATACGGTAAGCTTTATATTTATAGTCACCTAGATTAGTCCAGAGATGCTCATCTGCCTCATGAACCGTGACTCCTTGTCCCGTCTTGTACCATAGCACAAAAAAA 28 11433469 0.98568787 14 26 218 0.941176471 1.505149978 0.029411765 0.178571429 0.323529412 28 2 0 32 3R:11433355-11433481 6 CG5276 FBtr0082390|FBtr0339375 11433291|11433291 11433543|11433543 CCGTGA 6mer3-8 dme-miR-2535b-3p 3R + 11433419 11433475 3'utr CG5276 FlyBase G31685.1 AGATGCTCATCTGCCTCATGAACCGTGACTCCTTGTCCCGTCTTGTACCATAGCACA 18 11433437 0.837437872 5 16 109 0.923076923 1.380211242 0.192307692 0.333333333 0.538461538 18 2 0 24 3R:11433419-11433475 6 12 3536 FBgn0037900 117.3333333 8.9 13.58333333 0.102272727 1.348314607 0.883435583 -28 4 -12 0.01 dme-miR-184-5p 8mer-m1 TGATAAGG 3R 11465776 11465783 + 3R_11465776_11465783_+ 0.614713882 0.614713882 0.614713882 0 CG17230 FBtr0339376 11465566 11467372 3R + 11465758 11465812 3'utr CG17230 FlyBase G41998.1 ACTATGTGCACTTGTAGTTGATAAGGCTGATAGATAGGCGCACCCCCCTACCCCC 134 11465779 0.864715658 4 129 891 0.966442953 2.158362492 0.167785235 0.089552239 0.181208054 134 5 0 144 3R:11465758-11465812 8 CG17230 FBtr0339376 11465566 11467372 TGATAAGG 8mer-m1 dme-miR-184-5p 3R + 11465748 11465807 3'utr CG17230 FlyBase G31687.1 AGCGAACACCACTATGTGCACTTGTAGTTGATAAGGCTGATAGATAGGCGCACCCCCCTA 85 11465779 0.856076045 5 81 552 0.96350365 2.120573931 0.328467153 0.423529412 0.642335766 85 5 0 132 3R:11465748-11465807 8 106.5 3537 FBgn0046225 82.24 4.006666667 6.103333333 1.294990272 26.58069884 17.44948116 -3 -3 -3 0.01 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 11466578 11466585 + 3R_11466578_11466585_+ 0.631136385 0.631136385 0.631136385 0 CG17230 FBtr0339376 11465566 11467372 3R + 11466561 11466601 3'utr CG17230 FlyBase G41999.1 TGATATCTGCATTTGTTTCCGTCCAGAGTCGAGCCATCGAA 38 11466577 0.71232571 2 37 301 0.975609756 1.602059991 0.097560976 0.078947368 0.146341463 38 1 0 40 3R:11466561-11466601 8 CG17230 FBtr0339376 11465566 11467372 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R + 11466562 11466597 3'utr CG17230 FlyBase G31688.1 GATATCTGCATTTGTTTCCGTCCAGAGTCGAGCCAT 14 11466577 0.700897143 2 14 113 1 1.322219295 0.142857143 0.5 0.666666667 14 0 0 21 3R:11466562-11466597 8 26 3538 FBgn0046225 82.24 4.006666667 6.103333333 0.31614786 6.489184692 4.259967231 1 1 1 0.01 dme-miR-92b-3p 7mer-A1 TGCAATA 3R 11560055 11560061 - 3R_11560055_11560061_- 0.782863907 0.782911824 0.782887865 3.39E-05 sea FBtr0100462|FBtr0100465|FBtr0100461|FBtr0100464 11559894|11559894|11559894|11559894 11560164|11560164|11560164|11560164 3R - 11559961 11560111 3'utr sea FlyBase G50134.1 AAACCCACTCGTGCATTTTCCTCTGTTCCCATTGTTCCCTAGTCGACTGTTGCAATAGTTTCTAGTTTTGTGACATATTCCAAGAAAGCATTTTATATACACTCTATACCCGCAATGGGTAAGTGGCTATAGAAATTATACAGCTTGTTTT 43 11560062 0.985722729 20 43 362 1 1.707570176 0.176470588 0.186046512 0.31372549 43 0 0 51 3R:11559961-11560111 7 sea FBtr0100461|FBtr0100464|FBtr0100462|FBtr0100465 11559894|11559894|11559894|11559894 11560164|11560164|11560164|11560164 TGCAATA 7mer-A1 dme-miR-92b-3p 3R - 11560028 11560114 3'utr sea FlyBase G37915.1 AAAAAACCCACTCGTGCATTTTCCTCTGTTCCCATTGTTCCCTAGTCGACTGTTGCAATAGTTTCTAGTTTTGTGACATATTCCAAG 20 11560062 0.988905702 10 18 173 0.923076923 1.380211242 0.115384615 0.3 0.461538462 20 2 0 24 3R:11560028-11560114 7 20 3539 FBgn0037912 356.1766667 26.12 39.85 0.05615191 0.765696784 0.501882058 1 1 1 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 11575748 11575753 + 3R_11575748_11575753_+ 0.988916644 0.576939592 0.782928118 0.29131173 Mrp4 FBtr0302027 11575669 11575937 3R + 11575633 11575845 lincRNA_intron-lincRNA_exon Mrp4 FlyBase G42027.1 AGGCTCATTTGGAATCAATGAAACCGAAATCGGAGTAGATTAAGCATCTGGTTATTGGTTACTAAACTGGGAGCCAACAAGGTCTCATTTCCTGGCTGTAAGCGTCTTCAAAGTTGTACCTAATCCAGTCAGCTGCATTTAAGCTAGTTTTCTACTTAAAGTATTATGCCTTCGAACCGTACATACTTGTATAACTCAATCCTTATAGATATA 573 11575724 0.838123886 37 543 4331 0.951145038 2.016336796 0.198473282 0.115183246 0.225954198 573 27 5 623 3R:11575633-11575845 6 Mrp4 FBtr0302027 11575669 11575937 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 11575633 11575849 lincRNA_intron-lincRNA_exon Mrp4 FlyBase G31713.1 AGGCTCATTTGGAATCAATGAAACCGAAATCGGAGTAGATTAAGCATCTGGTTATTGGTTACTAAACTGGGAGCCAACAAGGTCTCATTTCCTGGCTGTAAGCGTCTTCAAAGTTGTACCTAATCCAGTCAGCTGCATTTAAGCTAGTTTTCTACTTAAAGTATTATGCCTTCGAACCGTACATACTTGTATAACTCAATCCTTATAGATATACTAT 380 11575724 0.765042843 42 364 2866 0.955035971 2.424064525 0.284172662 0.339473684 0.548561151 380 24 1 531 3R:11575633-11575849 6 173 3540 FBgn0263316 1433.733333 36.35333333 55.55 0.120664001 4.75884834 3.114311431 24 24 24 0.01 dme-miR-92b-3p 6mer2-7 TGCAAT 3R 11584842 11584847 + 3R_11584842_11584847_+ 1 1 1 0 wkd FBtr0082413|FBtr0082414 11584642|11584642 11585305|11585305 3R + 11584809 11584867 3'utr wkd FlyBase G42036.1 AGTTGGTCAGTCAATTACGGAGACATCATTCCATGCAATCAGTTTGCTAATTTTAAGAC 10 11584837 0.972611558 4 9 59 1 1 0 0 0 10 0 0 10 3R:11584809-11584867 6 wkd FBtr0082413|FBtr0082414 11584642|11584642 11585305|11585305 TGCAAT 6mer2-7 dme-miR-92b-3p 3R + 11584825 11584860 3'utr wkd FlyBase G31717.1 ACGGAGACATCATTCCATGCAATCAGTTTGCTAATT 7 11584838 0.715576098 3 7 46 1 1 0 0.285714286 0.5 7 0 0 10 3R:11584825-11584860 6 7.5 3541 FBgn0037917 354.31 20.74 31.50666667 0.021167904 0.361620058 0.238044858 5 4 4.5 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 11585088 11585094 + 3R_11585088_11585094_+ 0.658999527 0.658999527 0.658999527 0 wkd FBtr0082413|FBtr0082414 11584642|11584642 11585305|11585305 3R + 11585004 11585227 3'utr wkd FlyBase G42038.1 GCGTAACATTTAAAACCGTAGCGTTAGCTTTGAGTTGAGGACCCCGAACATATCGTATGATTATCATGATGATTACCACCCTGAGGCAGCTGACACAAGGACTGGAGGATTATATAGTTTGAAACTTTGACTACTTTATCCGTATTAACTCTGAGACGAGAATGTTGATATTTACCTACGATAATGCGTTACGAACGACTTCTGTTGTGCCCCCGAGCCTGAAA 160 11585085 0.975565849 39 149 925 0.943589744 1.787696568 0.143589744 0.16875 0.317948718 160 9 2 184 3R:11585004-11585227 7 wkd FBtr0082413|FBtr0082414 11584642|11584642 11585305|11585305 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 11585004 11585179 3'utr wkd FlyBase G31719.1 GCGTAACATTTAAAACCGTAGCGTTAGCTTTGAGTTGAGGACCCCGAACATATCGTATGATTATCATGATGATTACCACCCTGAGGCAGCTGACACAAGGACTGGAGGATTATATAGTTTGAAACTTTGACTACTTTATCCGTATTAACTCTGAGACGAGAATGTTGATATTTACC 144 11585085 0.837263679 27 130 815 0.928571429 1.444936571 0.19047619 0.326388889 0.538095238 144 9 6 195 3R:11585004-11585179 7 62 3542 FBgn0037917 354.31 20.74 31.50666667 0.174988005 2.989392478 1.967837495 3 3 3 0.01 dme-miR-968-5p 7mer-m8 ACTACTT 3R 11585133 11585139 + 3R_11585133_11585139_+ 0.626951584 0.626314734 0.626633159 0.000450356 wkd FBtr0082413|FBtr0082414 11584642|11584642 11585305|11585305 3R + 11585004 11585227 3'utr wkd FlyBase G42038.1 GCGTAACATTTAAAACCGTAGCGTTAGCTTTGAGTTGAGGACCCCGAACATATCGTATGATTATCATGATGATTACCACCCTGAGGCAGCTGACACAAGGACTGGAGGATTATATAGTTTGAAACTTTGACTACTTTATCCGTATTAACTCTGAGACGAGAATGTTGATATTTACCTACGATAATGCGTTACGAACGACTTCTGTTGTGCCCCCGAGCCTGAAA 160 11585155 0.975565849 39 149 925 0.943589744 1.787696568 0.143589744 0.16875 0.317948718 160 9 2 184 3R:11585004-11585227 7 wkd FBtr0082413|FBtr0082414 11584642|11584642 11585305|11585305 ACTACTT 7mer-m8 dme-miR-968-5p 3R + 11585004 11585179 3'utr wkd FlyBase G31719.1 GCGTAACATTTAAAACCGTAGCGTTAGCTTTGAGTTGAGGACCCCGAACATATCGTATGATTATCATGATGATTACCACCCTGAGGCAGCTGACACAAGGACTGGAGGATTATATAGTTTGAAACTTTGACTACTTTATCCGTATTAACTCTGAGACGAGAATGTTGATATTTACC 144 11585155 0.837263679 27 130 815 0.928571429 1.444936571 0.19047619 0.326388889 0.538095238 144 9 6 195 3R:11585004-11585179 7 24 3543 FBgn0037917 354.31 20.74 31.50666667 0.067737292 1.157184185 0.761743546 -22 -22 -22 0.01 dme-miR-965-3p 7mer-m8 TACGCTT 3R 11590907 11590913 - 3R_11590907_11590913_- 0.619093413 0.62010184 0.619597626 0.000713046 Jupiter FBtr0082455|FBtr0082453|FBtr0082457|FBtr0082456|FBtr0335232|FBtr0082452|FBtr0082454 11590384|11590384|11590384|11590384|11590384|11590384|11590384 11591167|11591167|11591167|11591167|11591167|11591167|11591167 3R - 11590601 11590999 3'utr Jupiter FlyBase G50177.3 AGGCACGAAAGTAGGACATGATGGCCAACGAATAATTAAGCGAGAGAATAGCAATTGCTCAACGATCTGCAGATGCAATAGTACGATACGCTTCCCAGATGAGAATTAATCAACCAATTTTAGAAGGCGGCGTTGCACCCAAACCTATCACTACCAACACCACCACCACCCCATTGCAAATCTGTAATTTAAATTCCTTAGTTGGTGTAAATCCATGTAACGCGTGTAGCCCCACAAAACGACGCCCGATCGCCTGCCCTCTGCAACTGCAGATATATTATATATATGATATTCATCAACCCGGTGTGTGCTTACGTGTGAAGCAAGCGAGAAGCAAGGATGCGAGCGGTGGCGGCCTGTTGGAGTCCTTTGATCACACATGGATTTTATTTTAGTTGC 316 11590943 0.952543803 59 289 1639 0.934210526 1.705130313 0.178947368 0.158227848 0.3 316 19 6 355 3R:11590601-11590999 7 Jupiter FBtr0082456|FBtr0082457|FBtr0082453|FBtr0082455|FBtr0082454|FBtr0082452|FBtr0335232 11590384|11590384|11590384|11590384|11590384|11590384|11590384 11591167|11591167|11591167|11591167|11591167|11591167|11591167 TACGCTT 7mer-m8 dme-miR-965-3p 3R - 11590598 11591003 3'utr Jupiter FlyBase G37948.2 CGAAAGGCACGAAAGTAGGACATGATGGCCAACGAATAATTAAGCGAGAGAATAGCAATTGCTCAACGATCTGCAGATGCAATAGTACGATACGCTTCCCAGATGAGAATTAATCAACCAATTTTAGAAGGCGGCGTTGCACCCAAACCTATCACTACCAACACCACCACCACCCCATTGCAAATCTGTAATTTAAATTCCTTAGTTGGTGTAAATCCATGTAACGCGTGTAGCCCCACAAAACGACGCCCGATCGCCTGCCCTCTGCAACTGCAGATATATTATATATATGATATTCATCAACCCGGTGTGTGCTTACGTGTGAAGCAAGCGAGAAGCAAGGATGCGAGCGGTGGCGGCCTGTTGGAGTCCTTTGATCACACATGGATTTTATTTTAGTTGCTAC 210 11590943 0.973257599 53 187 1136 0.897435897 1.669006781 0.169871795 0.333333333 0.551282051 210 27 5 280 3R:11590598-11591003 7 54 3544 FBgn0051363 4223.186667 342.4766667 526.7266667 0.012786553 0.157674975 0.102519966 30 30 30 0.01 dme-miR-995-5p 6mer2-7 ATTCGG 3R 11633775 11633780 - 3R_11633775_11633780_- 1 1 1 0 Csk FBtr0299728|FBtr0299729|FBtr0300549|FBtr0335449|FBtr0300547|FBtr0300546|FBtr0300548 11633276|11633276|11633276|11633276|11633276|11633276|11633276 11634819|11634819|11634819|11634819|11634819|11634819|11634819 3R - 11633679 11633800 3'utr Csk FlyBase G50193.1 AGTTCGTGGATTTGTTCATTATTCGGTCCATTCTTCTAACAAGGAATCTCCTTCTCTGTACTTTAATCGAACCCATCCAATGCATCTGGCGGCAAGGCAAAGGAAAATTGTAATTTATTTTT 106 11633779 0.890625827 10 105 1057 0.991525424 2.068185862 0.279661017 0.113207547 0.203389831 106 1 0 117 3R:11633679-11633800 6 Csk FBtr0300546|FBtr0300548|FBtr0335449|FBtr0300547|FBtr0299729|FBtr0300549|FBtr0299728 11633276|11633276|11633276|11633276|11633276|11633276|11633276 11634819|11634819|11634819|11634819|11634819|11634819|11634819 ATTCGG 6mer2-7 dme-miR-995-5p 3R - 11633676 11633801 3'utr Csk FlyBase G37962.1 AAGTTCGTGGATTTGTTCATTATTCGGTCCATTCTTCTAACAAGGAATCTCCTTCTCTGTACTTTAATCGAACCCATCCAATGCATCTGGCGGCAAGGCAAAGGAAAATTGTAATTTATTTTTTAA 78 11633779 0.84016015 11 76 760 0.983471074 2.075546961 0.272727273 0.41025641 0.619834711 78 2 0 119 3R:11633676-11633801 6 67 3545 FBgn0262081 3599.453333 94.44666667 145.5866667 0.018613938 0.709395073 0.460206979 -1 -1 -1 0.01 dme-miR-968-5p 6mer3-8 ACTACT 3R 11634435 11634440 - 3R_11634435_11634440_- 1 1 1 0 Csk FBtr0299728|FBtr0299729|FBtr0300549|FBtr0335449|FBtr0300547|FBtr0300546|FBtr0300548 11633276|11633276|11633276|11633276|11633276|11633276|11633276 11634819|11634819|11634819|11634819|11634819|11634819|11634819 3R - 11634397 11634445 3'utr Csk FlyBase G50199.1 CTACTACTACTACCTTTAACTACCTACCACAATATTATGTTATGTGTAC 6 11634429 0.975437918 6 6 40 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 3R:11634397-11634445 6 Csk FBtr0300546|FBtr0300548|FBtr0335449|FBtr0300547|FBtr0299729|FBtr0300549|FBtr0299728 11633276|11633276|11633276|11633276|11633276|11633276|11633276 11634819|11634819|11634819|11634819|11634819|11634819|11634819 ACTACT 6mer3-8 dme-miR-968-5p 3R - 11634347 11634443 3'utr Csk FlyBase G37966.1 ACTACTACTACCTTTAACTACCTACCACAATATTATGTTATGTGTACACTTAACCATAGCTATTTATTAGTTAACTTCTCGGTTCGGACTCCACTGT 9 11634429 0.983923819 7 9 74 1 1.176091259 0.133333333 0.444444444 0.666666667 9 0 0 15 3R:11634347-11634443 6 5 3546 FBgn0262081 3599.453333 94.44666667 145.5866667 0.0013891 0.052939931 0.034343804 -11 -11 -11 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3R 11634695 11634700 - 3R_11634695_11634700_- 1 1 1 0 Csk FBtr0299728|FBtr0299729|FBtr0300549|FBtr0335449|FBtr0300547|FBtr0300546|FBtr0300548 11633276|11633276|11633276|11633276|11633276|11633276|11633276 11634819|11634819|11634819|11634819|11634819|11634819|11634819 3R - 11634662 11634715 3'utr Csk FlyBase G50203.1 AGAAATGGGCCAGATCCAAAGCTGAAACTGACTTGACACTGAACGCAACAATTT 11 11634682 0.932202634 4 10 39 1 1.146128036 0.142857143 0.181818182 0.357142857 11 0 0 14 3R:11634662-11634715 6 Csk FBtr0300546|FBtr0300548|FBtr0335449|FBtr0300547|FBtr0299729|FBtr0300549|FBtr0299728 11633276|11633276|11633276|11633276|11633276|11633276|11633276 11634819|11634819|11634819|11634819|11634819|11634819|11634819 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 11634617 11634711 3'utr Csk FlyBase G37968.1 ATGGGCCAGATCCAAAGCTGAAACTGACTTGACACTGAACGCAACAATTTTTCGTACGATTATATACATACATGAATATATAACTACTTTACAAC 16 11634683 0.969857943 11 15 94 0.888888889 1.380211242 0.074074074 0.375 0.62962963 16 3 0 24 3R:11634617-11634711 6 5 3547 FBgn0262081 3599.453333 94.44666667 145.5866667 0.0013891 0.052939931 0.034343804 -18 -17 -17.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 11673703 11673709 + 3R_11673703_11673709_+ 0.515731656 0.80096962 0.658350638 0.201693653 CG42327 FBtr0299789|FBtr0299789|FBtr0299789 11673461|11673461|11673461 11673974|11673974|11673974 3R + 11673690 11673720 3'utr CG42327 FlyBase G42072.1 ATTCCTTTATTATTGTGATATAATCGTACAT 9 11673702 0.680148299 2 9 97 1 1.079181246 0 0.222222222 0.416666667 9 0 0 12 3R:11673690-11673720 7 CG42327 FBtr0299789|FBtr0299789|FBtr0299789 11673461|11673461|11673461 11673974|11673974|11673974 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 11673686 11673721 3'utr CG42327 FlyBase G31753.1 ATGTATTCCTTTATTATTGTGATATAATCGTACATT 12 11673702 0.689120412 4 11 137 0.9 1.255272505 0.15 0.5 0.7 12 2 0 18 3R:11673686-11673721 7 10.5 3548 FBgn0259227 1487.13 32.72666667 50.52333333 0.00706058 0.320839275 0.207824767 1 1 1 0.01 dme-miR-184-5p 6mer3-8 TGATAA 3R 11743989 11743994 + 3R_11743989_11743994_+ 1 1 1 0 CG14722 FBtr0082431 11743724 11744027 3R + 11743979 11744016 3'utr CG14722 FlyBase G42095.1 GAAATGTTATTGATAATAGAACTGATTTAAAATAAAAT 11 11743990 0.690436529 5 11 85 1 1.113943352 0 0.181818182 0.307692308 11 0 0 13 3R:11743979-11744016 6 CG14722 FBtr0082431 11743724 11744027 TGATAA 6mer3-8 dme-miR-184-5p 3R + 11743934 11744017 3'utr CG14722 FlyBase G31775.1 AATCCCTAATATGTTGGACGAAGATTTTACACAAAGTTTCACAATGAAATGTTATTGATAATAGAACTGATTTAAAATAAAATA 17 11743992 0.984957361 10 16 123 0.958333333 1.361727836 0.166666667 0.352941176 0.541666667 17 1 0 23 3R:11743934-11744017 6 11.5 3549 FBgn0037943 542.9533333 32.08666667 49.30666667 0.021180457 0.358404322 0.233234181 -1 -3 -2 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 11744632 11744638 - 3R_11744632_11744638_- 0.801970434 0.801970437 0.801970436 0 CG6923 FBtr0330169|FBtr0330169|FBtr0330169|FBtr0082433|FBtr0082433|FBtr0082433|FBtr0082432|FBtr0082432|FBtr0082432|FBtr0307892|FBtr0307892|FBtr0307892 11744481|11744481|11744481|11744481|11744481|11744481|11744227|11744227|11744227|11744481|11744481|11744481 11744911|11744911|11744911|11744938|11744938|11744938|11744938|11744938|11744938|11744938|11744938|11744938 3R - 11744625 11744649 3'utr CG6923 FlyBase G50234.1 AACAAAATTCTTGTGATAAGAATTT 5 11744638 0.628718048 2 4 32 1 0.698970004 0 0 0 5 0 0 5 3R:11744625-11744649 7 CG6923 FBtr0082432|FBtr0082432|FBtr0082432|FBtr0307892|FBtr0307892|FBtr0307892|FBtr0330169|FBtr0330169|FBtr0330169|FBtr0082433|FBtr0082433|FBtr0082433 11744227|11744227|11744227|11744481|11744481|11744481|11744481|11744481|11744481|11744481|11744481|11744481 11744938|11744938|11744938|11744938|11744938|11744938|11744911|11744911|11744911|11744938|11744938|11744938 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 11744626 11744714 3'utr CG6923 FlyBase G37989.1 AAGTATATTAAGTGATTCGGCAAATAATTTCCTATACATATGTACAAATTGTCTACGTTTTGTGAAACAAAATTCTTGTGATAAGAATT 12 11744640 0.989360084 8 9 86 0.8125 1.113943352 0.125 0.333333333 0.5 12 3 0 13 3R:11744626-11744714 7 4 3550 FBgn0037944 206.3266667 5.293333333 8.143333333 0.019386733 0.755667506 0.491199345 0 2 1 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 3R 11744898 11744904 - 3R_11744898_11744904_- 0.823349562 0.823349562 0.823349562 0 CG6923 FBtr0330169|FBtr0082433|FBtr0082432|FBtr0307892 11744481|11744481|11744227|11744481 11744911|11744938|11744938|11744938 3R - 11744883 11744936 stop_codon CG6923 FlyBase G50237.1 TTGTGTGCACGGCATCTTTATGTAAATCCCTCAGACTGAGTTTGTTCTCGGCAT 49 11744906 0.982589196 7 42 319 0.842105263 0.903089987 0.087719298 0.12244898 0.245614035 49 4 5 48 3R:11744883-11744936 7 CG6923 FBtr0082432|FBtr0307892|FBtr0330169|FBtr0082433 11744227|11744481|11744481|11744481 11744938|11744938|11744911|11744938 AGACTGA 7mer-A1 dme-miR-14-3p 3R - 11744883 11744917 stop_codon CG6923 FlyBase G37990.1 ATGTAAATCCCTCAGACTGAGTTTGTTCTCGGCAT 24 11744906 0.868775497 3 24 139 1 1.491361694 0.032258065 0.25 0.419354839 24 0 0 31 3R:11744883-11744917 7 35.5 3551 FBgn0037944 206.3266667 5.293333333 8.143333333 0.172057255 6.706549118 4.359394187 2 2 2 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 11751836 11751842 - 3R_11751836_11751842_- 0.801970437 0.801970436 0.801970437 0 Lk6 FBtr0082534|FBtr0082534|FBtr0082534 11750929|11750929|11750929 11752971|11752971|11752971 3R - 11751712 11751867 3'utr Lk6 FlyBase G50256.1 CATACACCTATAATATTTAAAAAATTGTGATATAAAATGTAAATGTAAATGCACCTGAAGAAATCTATCTATCAAATGACGCTGTGCCATCAACAACCACTTCAATCTACTGATAAGAGGAGTATCATTTTCCACAGACCTTATTTGTTTACGTCC 80 11751843 0.981087449 18 76 625 0.955555556 1.457377197 0.022222222 0.1125 0.211111111 80 2 2 86 3R:11751712-11751867 7 Lk6 FBtr0082534|FBtr0082534|FBtr0082534 11750929|11750929|11750929 11752971|11752971|11752971 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 11751745 11751861 3'utr Lk6 FlyBase G37998.1 CCTATAATATTTAAAAAATTGTGATATAAAATGTAAATGTAAATGCACCTGAAGAAATCTATCTATCAAATGACGCTGTGCCATCAACAACCACTTCAATCTACTGATAAGAGGAGT 68 11751843 0.985836117 13 63 524 0.926315789 1.467361417 0 0.308823529 0.505263158 68 5 2 88 3R:11751745-11751861 7 55 3552 FBgn0017581 12415.55667 253.5666667 388.6133333 0.004429926 0.216905482 0.141528855 1 1 1 0.01 dme-miR-965-3p 6mer3-8 TACGCT 3R 11752657 11752662 - 3R_11752657_11752662_- 1 1 1 0 Lk6 FBtr0082535|FBtr0082534 11752383|11750929 11752971|11752971 3R - 11752583 11752749 5'utr Lk6 FlyBase G50261.2 AATAAAATGATGAATACTTGTGGTAGGAGAAAGCGACTGCGAAGTGAAACCAACTGAAACCGAGGGAAATTGAGAGTGGCAATAGTCTACGCTGTTTTGAAGCAAGCCAAACAGTCGTTCGAGATGAAAACAACAGAAAACAAATACCTTTTTTTATAAAAAAGATT 143 11752679 0.933857177 24 135 603 0.95625 2.184691431 0.20625 0.097902098 0.19375 143 7 0 153 3R:11752583-11752749 6 Lk6 FBtr0082535|FBtr0082534 11752383|11750929 11752971|11752971 TACGCT 6mer3-8 dme-miR-965-3p 3R - 11752593 11752749 5'utr Lk6 FlyBase G38001.1 AATAAAATGATGAATACTTGTGGTAGGAGAAAGCGACTGCGAAGTGAAACCAACTGAAACCGAGGGAAATTGAGAGTGGCAATAGTCTACGCTGTTTTGAAGCAAGCCAAACAGTCGTTCGAGATGAAAACAACAGAAAACAAATACCTTTTTTTAT 79 11752679 0.957815727 20 74 345 0.95 1.755874856 0.283333333 0.417721519 0.616666667 79 5 1 114 3R:11752593-11752749 6 23 3553 FBgn0017581 12415.55667 253.5666667 388.6133333 0.001852515 0.090705929 0.059184794 17 17 17 0.01 dme-miR-34-5p 6mer3-8 CACTGC 3R 11752812 11752817 - 3R_11752812_11752817_- 1 1 1 0 Lk6 FBtr0082535|FBtr0082534 11752383|11750929 11752971|11752971 3R - 11752790 11752841 5'utr Lk6 FlyBase G50262.1 CTATTTAAATTCAATTGATTCCGCCACTGCAAACAGAGTTAACAAAAACCCC 19 11752823 0.905082194 6 19 112 1 1.342422681 0 0.157894737 0.272727273 19 0 0 22 3R:11752790-11752841 6 Lk6 FBtr0082535|FBtr0082534 11752383|11750929 11752971|11752971 CACTGC 6mer3-8 dme-miR-34-5p 3R - 11752799 11752876 5'utr Lk6 FlyBase G38002.1 CAAAAGCTAACGTTTATTGCAAAAGTGTATGCAAACTATTTAAATTCAATTGATTCCGCCACTGCAAACAGAGTTAAC 16 11752823 0.979377198 5 14 87 1 1.397940009 0 0.375 0.6 16 0 0 25 3R:11752799-11752876 6 13.5 3554 FBgn0017581 12415.55667 253.5666667 388.6133333 0.001087346 0.053240436 0.034738901 6 6 6 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 11781567 11781572 - 3R_11781567_11781572_- 1 1 1 0 CG17360 FBtr0082531|FBtr0333819 11781129|11781129 11781819|11781819 3R - 11781519 11781658 3'utr CG17360 FlyBase G50296.1 TGCGTGCCTCCGCTTGACTCATTCATTCGTTTGCGCTTAGTAACATCTCATTTGAATAATTTTTGTGATATTAAACTTAAAGTCGCTGATCTTTGGTATGCTCTTTTGTAGGATATTTAGTTTCTATTGATTTTCTACAT 167 11781597 0.910691985 30 153 1641 0.909090909 1.67669361 0.224880383 0.221556886 0.377990431 167 16 3 190 3R:11781519-11781658 6 CG17360 FBtr0333819|FBtr0082531 11781129|11781129 11781819|11781819 TGATCT 6mer3-8 dme-bantam-3p 3R - 11781530 11781663 3'utr CG17360 FlyBase G38028.1 TGTAATGCGTGCCTCCGCTTGACTCATTCATTCGTTTGCGCTTAGTAACATCTCATTTGAATAATTTTTGTGATATTAAACTTAAAGTCGCTGATCTTTGGTATGCTCTTTTGTAGGATATTTAGTTTCTATTG 100 11781597 0.746402167 24 91 974 0.919708029 2.100370545 0.116788321 0.29 0.481751825 100 11 0 126 3R:11781530-11781663 6 41.5 3555 FBgn0037949 382.3133333 8.926666667 13.76333333 0.108549706 4.648991785 3.015257932 25 25 25 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 11781589 11781595 - 3R_11781589_11781595_- 0.801965276 0.801970437 0.801967857 3.61E-06 CG17360 FBtr0082531|FBtr0082531|FBtr0082531|FBtr0333819|FBtr0333819|FBtr0333819 11781129|11781129|11781129|11781129|11781129|11781129 11781819|11781819|11781819|11781819|11781819|11781819 3R - 11781519 11781658 3'utr CG17360 FlyBase G50296.1 TGCGTGCCTCCGCTTGACTCATTCATTCGTTTGCGCTTAGTAACATCTCATTTGAATAATTTTTGTGATATTAAACTTAAAGTCGCTGATCTTTGGTATGCTCTTTTGTAGGATATTTAGTTTCTATTGATTTTCTACAT 167 11781597 0.910691985 30 153 1641 0.909090909 1.67669361 0.224880383 0.221556886 0.377990431 167 16 3 190 3R:11781519-11781658 7 CG17360 FBtr0333819|FBtr0333819|FBtr0333819|FBtr0082531|FBtr0082531|FBtr0082531 11781129|11781129|11781129|11781129|11781129|11781129 11781819|11781819|11781819|11781819|11781819|11781819 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 11781530 11781663 3'utr CG17360 FlyBase G38028.1 TGTAATGCGTGCCTCCGCTTGACTCATTCATTCGTTTGCGCTTAGTAACATCTCATTTGAATAATTTTTGTGATATTAAACTTAAAGTCGCTGATCTTTGGTATGCTCTTTTGTAGGATATTTAGTTTCTATTG 100 11781597 0.746402167 24 91 974 0.919708029 2.100370545 0.116788321 0.29 0.481751825 100 11 0 126 3R:11781530-11781663 7 49.5 3556 FBgn0037949 382.3133333 8.926666667 13.76333333 0.129474951 5.545182972 3.596512473 2 2 2 0.01 dme-miR-33-5p 6mer2-7 AATGCA 3R 11789431 11789436 - 3R_11789431_11789436_- 1 1 1 0 Sbf FBtr0082529|FBtr0082530 11789291|11789291 11789928|11789928 3R - 11789369 11789492 3'utr Sbf FlyBase G50302.1 TATATAGGTTTATAGTGAATTTACCAAAGAATATTCCACCTTTGTTGCGCAATTGAAATGCATTTCTTGATTGCTTCCTTTAAACTAAACCCTATTATTAAACGCTTTCCTTTATTTATACACT 131 11789440 0.874316674 18 123 1075 0.953333333 1.854306042 0.326666667 0.106870229 0.22 131 6 1 143 3R:11789369-11789492 6 Sbf FBtr0082529|FBtr0082530 11789291|11789291 11789928|11789928 AATGCA 6mer2-7 dme-miR-33-5p 3R - 11789403 11789493 3'utr Sbf FlyBase G38031.1 CTATATAGGTTTATAGTGAATTTACCAAAGAATATTCCACCTTTGTTGCGCAATTGAAATGCATTTCTTGATTGCTTCCTTTAAACTAAAC 64 11789440 0.852379275 16 64 514 1 1.934498451 0.197674419 0.234375 0.430232558 64 0 0 86 3R:11789403-11789493 6 39.5 3557 FBgn0025802 636.01 11.3 17.24 0.062105942 3.495575221 2.291183295 4 4 4 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 3R 11789463 11789470 - 3R_11789463_11789470_- 0.64356572 0.64356572 0.64356572 0 Sbf FBtr0082529|FBtr0082530 11789291|11789291 11789928|11789928 3R - 11789369 11789492 3'utr Sbf FlyBase G50302.1 TATATAGGTTTATAGTGAATTTACCAAAGAATATTCCACCTTTGTTGCGCAATTGAAATGCATTTCTTGATTGCTTCCTTTAAACTAAACCCTATTATTAAACGCTTTCCTTTATTTATACACT 131 11789441 0.874316674 18 123 1075 0.953333333 1.854306042 0.326666667 0.106870229 0.22 131 6 1 143 3R:11789369-11789492 8 Sbf FBtr0082529|FBtr0082530 11789291|11789291 11789928|11789928 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 11789403 11789493 3'utr Sbf FlyBase G38031.1 CTATATAGGTTTATAGTGAATTTACCAAAGAATATTCCACCTTTGTTGCGCAATTGAAATGCATTTCTTGATTGCTTCCTTTAAACTAAAC 64 11789471 0.852379275 16 64 514 1 1.934498451 0.197674419 0.234375 0.430232558 64 0 0 86 3R:11789403-11789493 8 49.5 3558 FBgn0025802 636.01 11.3 17.24 0.077828965 4.380530973 2.871229698 -29 1 -14 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3R 11789607 11789613 - 3R_11789607_11789613_- 0.443131018 0.443131017 0.443131017 0 Sbf FBtr0082529|FBtr0082530 11789291|11789291 11789928|11789928 3R - 11789545 11789635 3'utr Sbf FlyBase G50303.1 ATGTAAAGAAACTATAAAATTATGTGATTATATAAACAAACAAAAATCAGACTATGATAAATTTACGATAAAATGGAAAAGCCACGCCCGC 27 11789616 0.976840609 9 26 167 0.966666667 1.462397998 0.033333333 0.111111111 0.2 27 1 0 29 3R:11789545-11789635 7 Sbf FBtr0082529|FBtr0082530 11789291|11789291 11789928|11789928 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 11789562 11789624 3'utr Sbf FlyBase G38032.1 CTATAAAATTATGTGATTATATAAACAAACAAAAATCAGACTATGATAAATTTACGATAAAAT 14 11789589 0.979362188 7 12 83 0.913043478 1.322219295 0 0.5 0.695652174 14 2 0 21 3R:11789562-11789624 7 11 3559 FBgn0025802 636.01 11.3 17.24 0.017295326 0.973451327 0.638051044 3 -24 -10.5 0.01 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3R 11816511 11816516 - 3R_11816511_11816516_- 1 1 1 0 glo FBtr0089918 11815204 11816719 3R - 11816490 11816545 intron-5'utr glo FlyBase G50340.1 GATTGGGGCAACAATGGCAACTTTGGCGTTGGTGCCAACAACATGCTGGGCTTCAA 24 11816531 0.951914577 4 23 103 0.882352941 1.477121255 0.5 0.25 0.470588235 24 4 0 30 3R:11816490-11816545 6 glo FBtr0089918 11815204 11816719 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3R - 11816495 11816545 intron-5'utr glo FlyBase G38055.1 GATTGGGGCAACAATGGCAACTTTGGCGTTGGTGCCAACAACATGCTGGGC 10 11816531 0.965438027 3 10 55 1 1.176091259 0.466666667 0.3 0.533333333 10 0 0 15 3R:11816495-11816545 6 4 3560 FBgn0259139 791.3 46.04 70.58666667 0.005054973 0.086880973 0.056667926 15 15 15 0.01 dme-miR-283-5p 7mer-A1 GATATTA 3R 11893797 11893803 - 3R_11893797_11893803_- 0.782911824 0.782911824 0.782911824 0 Cad87A FBtr0082513 11893510 11894247 3R - 11893766 11893858 3'utr Cad87A FlyBase G50372.1 AATGTACATCTACAATGGCATCTACACAATGCAGTCTTTACTCGAAAACTTCCGCGATATTAGTTTTAATGGCGATCCAAATCGTCTACAGCT 145 11893808 0.988789077 9 139 1321 0.961038961 2.170261715 0.331168831 0.062068966 0.116883117 145 6 0 148 3R:11893766-11893858 7 Cad87A FBtr0082513 11893510 11894247 GATATTA 7mer-A1 dme-miR-283-5p 3R - 11893767 11893856 3'utr Cad87A FlyBase G38074.1 TGTACATCTACAATGGCATCTACACAATGCAGTCTTTACTCGAAAACTTCCGCGATATTAGTTTTAATGGCGATCCAAATCGTCTACAGC 81 11893808 0.988383586 9 74 694 0.8984375 1.458637849 0.375 0.432098765 0.640625 81 10 3 115 3R:11893767-11893856 7 108 3561 FBgn0037963 524.8733333 8.663333333 13.23333333 0.20576393 12.46633321 8.161209068 5 5 5 0.01 dme-miR-184-3p 6mer3-8 TCCGTC 3R 11964883 11964888 - 3R_11964883_11964888_- 1 1 1 0 CG12213 FBtr0334155|FBtr0113223|FBtr0334156 11964672|11964672|11964672 11965424|11965424|11965424 3R - 11964818 11964912 3'utr CG12213 FlyBase G50393.1 ACGTTTCACTTCTGCATTTGCAATTCCGTCAACCCATTTCGCTAGAGATTAGGTAGCTACATAAGATAGGAGTGTACGCTAGCATTCGAAAACAC 158 11964889 0.803984064 14 154 1113 0.969230769 2.276461804 0.087179487 0.164556962 0.323076923 158 6 0 189 3R:11964818-11964912 6 CG12213 FBtr0334156|FBtr0113223|FBtr0334155 11964672|11964672|11964672 11965424|11965424|11965424 TCCGTC 6mer3-8 dme-miR-184-3p 3R - 11964867 11964911 3'utr CG12213 FlyBase G38087.1 CGTTTCACTTCTGCATTTGCAATTCCGTCAACCCATTTCGCTAGA 83 11964889 0.806439199 2 79 560 0.955752212 1.73239376 0.159292035 0.289156627 0.477876106 83 4 1 108 3R:11964867-11964911 6 113 3562 FBgn0260742 1391.876667 80.28333333 122.6666667 0.081185354 1.407515051 0.921195652 1 1 1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 11964971 11964978 - 3R_11964971_11964978_- 0.650171355 0.650171355 0.650171355 0 CG12213 FBtr0334155|FBtr0334155|FBtr0334155|FBtr0113223|FBtr0113223|FBtr0113223|FBtr0334156|FBtr0334156|FBtr0334156 11964672|11964672|11964672|11964672|11964672|11964672|11964672|11964672|11964672 11965424|11965424|11965424|11965424|11965424|11965424|11965424|11965424|11965424 3R - 11964929 11965003 3'utr CG12213 FlyBase G50394.1 AAATATACTCTATATACTTGGTTTTCTGTGATAAAAATAAACGCTGCGCTGCATTTGGGCAATGTTGCCTGTTTT 304 11964980 0.709617965 17 279 2986 0.915068493 1.62065648 0.046575342 0.151315789 0.293150685 304 24 7 334 3R:11964929-11965003 8 CG12213 FBtr0334156|FBtr0334156|FBtr0334156|FBtr0113223|FBtr0113223|FBtr0113223|FBtr0334155|FBtr0334155|FBtr0334155 11964672|11964672|11964672|11964672|11964672|11964672|11964672|11964672|11964672 11965424|11965424|11965424|11965424|11965424|11965424|11965424|11965424|11965424 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 11964943 11965031 3'utr CG12213 FlyBase G38088.1 TTGCTAAATCCTTACAAGTTTCATTAACAAATATACTCTATATACTTGGTTTTCTGTGATAAAAATAAACGCTGCGCTGCATTTGGGCA 178 11964980 0.692796783 15 163 1662 0.931174089 2.06069784 0.052631579 0.275280899 0.477732794 178 16 1 230 3R:11964943-11965031 8 230.5 3563 FBgn0260742 1391.876667 80.28333333 122.6666667 0.165603753 2.871081586 1.879076087 2 2 2 0.01 dme-miR-14-3p 7mer-m8 AAGACTG 3R 11965085 11965091 - 3R_11965085_11965091_- 0.671298909 0.669049993 0.670174451 0.001590212 CG12213 FBtr0334155|FBtr0113223|FBtr0334156 11964672|11964672|11964672 11965424|11965424|11965424 3R - 11965012 11965152 3'utr CG12213 FlyBase G50395.1 CTCGCAGGAAATACAATACTCTGAGATGGAGCTACGAACAAATGCAGACAGATTTAAAATGAAGACTGTTTCAGTTCTGCCTTGCAAATTATTAGTCCCGAATTAGCAGTAATCGAAATCGTTGCTAAATCCTTACAAGTT 33 11965094 0.974567835 18 32 197 0.977272727 1.633468456 0.113636364 0.272727273 0.454545455 33 1 0 43 3R:11965012-11965152 7 CG12213 FBtr0334156|FBtr0113223|FBtr0334155 11964672|11964672|11964672 11965424|11965424|11965424 AAGACTG 7mer-m8 dme-miR-14-3p 3R - 11965066 11965207 3'utr CG12213 FlyBase G38089.1 AACGTCATGACTACCATCATTTCGTTAATAGCAAATGAAGAACAAGAAATTAAAACTCGCAGGAAATACAATACTCTGAGATGGAGCTACGAACAAATGCAGACAGATTTAAAATGAAGACTGTTTCAGTTCTGCCTTGCAA 23 11965084 0.976204513 13 22 143 0.96875 1.491361694 0.15625 0.347826087 0.53125 23 1 0 31 3R:11965066-11965207 7 11 3564 FBgn0260742 1391.876667 80.28333333 122.6666667 0.007902999 0.137014739 0.089673913 3 -7 -2 0.01 dme-miR-304-5p 6mer3-8 TGAGAT 3R 11965126 11965131 - 3R_11965126_11965131_- 1 1 1 0 CG12213 FBtr0334155|FBtr0113223|FBtr0334156 11964672|11964672|11964672 11965424|11965424|11965424 3R - 11965012 11965152 3'utr CG12213 FlyBase G50395.1 CTCGCAGGAAATACAATACTCTGAGATGGAGCTACGAACAAATGCAGACAGATTTAAAATGAAGACTGTTTCAGTTCTGCCTTGCAAATTATTAGTCCCGAATTAGCAGTAATCGAAATCGTTGCTAAATCCTTACAAGTT 33 11965131 0.974567835 18 32 197 0.977272727 1.633468456 0.113636364 0.272727273 0.454545455 33 1 0 43 3R:11965012-11965152 6 CG12213 FBtr0334156|FBtr0113223|FBtr0334155 11964672|11964672|11964672 11965424|11965424|11965424 TGAGAT 6mer3-8 dme-miR-304-5p 3R - 11965066 11965207 3'utr CG12213 FlyBase G38089.1 AACGTCATGACTACCATCATTTCGTTAATAGCAAATGAAGAACAAGAAATTAAAACTCGCAGGAAATACAATACTCTGAGATGGAGCTACGAACAAATGCAGACAGATTTAAAATGAAGACTGTTTCAGTTCTGCCTTGCAA 23 11965128 0.976204513 13 22 143 0.96875 1.491361694 0.15625 0.347826087 0.53125 23 1 0 31 3R:11965066-11965207 6 8.5 3565 FBgn0260742 1391.876667 80.28333333 122.6666667 0.006106863 0.105875026 0.069293478 0 -3 -1.5 0.01 dme-miR-190-5p 6mer3-8 ACATAT 3R 11971406 11971411 + 3R_11971406_11971411_+ 1 1 1 0 GC1 FBtr0082484|FBtr0334153 11971174|11971174 11971478|11971686 3R + 11971377 11971432 3'utr GC1 FlyBase G42139.1 ATCCTCTTAAACTACTCAAACGATGTACTACATATGTATTTAGACCATGTCAGAAG 99 11971400 0.901200402 3 98 663 0.99137931 2.06069784 0.439655172 0.151515152 0.275862069 99 1 0 115 3R:11971377-11971432 6 GC1 FBtr0082484|FBtr0334153 11971174|11971174 11971478|11971686 ACATAT 6mer3-8 dme-miR-190-5p 3R + 11971380 11971423 3'utr GC1 FlyBase G31803.1 CTCTTAAACTACTCAAACGATGTACTACATATGTATTTAGACCA 57 11971400 0.887212182 2 57 340 1 1.963787827 0.510869565 0.473684211 0.673913043 57 0 0 92 3R:11971380-11971423 6 76.5 3566 FBgn0260743 125.7333333 9.316666667 14.38333333 0.608430541 8.211091234 5.318655852 6 6 6 0.01 dme-miR-932-5p 7mer-A1 GAATTGA 3R 12008345 12008351 - 3R_12008345_12008351_- 0.823349562 0.628241014 0.725795288 0.137962614 KLHL18 FBtr0082557|FBtr0082556 12008099|12008099 12008412|12008412 3R - 12008312 12008360 3'utr KLHL18 FlyBase G50426.2 AATTTATGTGAATTGAATCGATATAGTTTAGCCTAGATATGATTGTTGA 9 12008347 0.983671825 4 6 50 0.727272727 0.602059991 0.090909091 0.222222222 0.363636364 9 2 1 8 3R:12008312-12008360 7 KLHL18 FBtr0082557|FBtr0082556 12008099|12008099 12008412|12008412 GAATTGA 7mer-A1 dme-miR-932-5p 3R - 12008334 12008392 3'utr KLHL18 FlyBase G38108.1 AACCCGTTTCTCTAGCCACACTCGTCTTAGGTAATTTATGTGAATTGAATCGATATAGT 8 12008348 0.83558706 5 7 68 0.923076923 1.079181246 0.153846154 0.625 0.769230769 8 1 0 12 3R:12008334-12008392 7 5 3567 FBgn0037978 103.3333333 5.816666667 8.826666667 0.048387097 0.859598854 0.566465257 -4 -3 -3.5 0.01 dme-miR-305-5p 7mer-m1 GTACAAT 3R 12014686 12014692 + 3R_12014686_12014692_+ 0.765586663 0.765586663 0.765586663 0 GCC185 FBtr0113224 12014585 12015059 3R + 12014675 12014695 3'utr GCC185 FlyBase G42163.1 CTGTAAATCTTGTACAATTTC 5 12014685 0.607191249 4 5 40 1 0.903089987 0 0.6 0.75 5 0 0 8 3R:12014675-12014695 7 GCC185 FBtr0113224 12014585 12015059 GTACAAT 7mer-m1 dme-miR-305-5p 3R + 12014674 12014696 3'utr GCC185 FlyBase G31820.1 TCTGTAAATCTTGTACAATTTCC 6 12014684 0.670810293 3 5 48 0.875 0.84509804 0 0.333333333 0.5 6 1 0 7 3R:12014674-12014696 7 5.5 3568 FBgn0037979 856.9066667 25.72 39.52333333 0.006418435 0.213841369 0.139158303 1 2 1.5 0.01 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA 3R 12014830 12014837 + 3R_12014830_12014837_+ 0.627007348 0.627007348 0.627007348 0 GCC185 FBtr0113224 12014585 12015059 3R + 12014798 12014860 3'utr GCC185 FlyBase G42165.1 TACAGCACCACCGGCAATATGCGCGTTGTAGATTGAAGAAAGCCTTTGCATATATTTAAAAAC 17 12014844 0.973102237 6 17 103 1 1.342422681 0.181818182 0.235294118 0.409090909 17 0 0 22 3R:12014798-12014860 8 GCC185 FBtr0113224 12014585 12015059 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p 3R + 12014818 12014854 3'utr GCC185 FlyBase G31821.1 GCGCGTTGTAGATTGAAGAAAGCCTTTGCATATATTT 14 12014844 0.722934457 4 14 80 1 1.301029996 0.15 0.357142857 0.55 14 0 0 20 3R:12014818-12014854 8 14 3569 FBgn0037979 856.9066667 25.72 39.52333333 0.016337835 0.544323484 0.354221135 -14 -14 -14 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 12015178 12015183 - 3R_12015178_12015183_- 1 0.999999999 0.999999999 0 CG3313 FBtr0335433|FBtr0082555 12014941|12014941 12015246|12015246 3R - 12015162 12015199 3'utr CG3313 FlyBase G50438.1 GTAGTTATTCGACTTGTGATCTTTAATCTTTTGGCGCA 33 12015184 0.643515628 5 31 345 0.952380952 1.124938737 0.214285714 0.212121212 0.380952381 33 0 2 40 3R:12015162-12015199 6 CG3313 FBtr0335433|FBtr0082555 12014941|12014941 12015246|12015246 TGATCT 6mer3-8 dme-bantam-3p 3R - 12015163 12015197 3'utr CG3313 FlyBase G38113.1 AGTTATTCGACTTGTGATCTTTAATCTTTTGGCGC 20 12015179 0.615368066 6 18 186 0.961538462 1.397940009 0 0.315789474 0.5 19 1 0 25 3R:12015163-12015197 6 26 3570 FBgn0037980 81.43333333 5.28 7.943333333 0.319279574 4.924242424 3.273185061 1 -4 -1.5 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 3R 12068931 12068936 - 3R_12068931_12068936_- 0.996278273 0.997958578 0.997118425 0.001188152 ATP8B FBtr0339645|FBtr0339646|FBtr0300351|FBtr0307016|FBtr0307015|FBtr0339644|FBtr0339643 12068373|12068373|12068373|12068373|12068373|12068373|12068373 12069582|12069582|12069582|12069582|12069582|12069582|12069582 3R - 12068806 12069119 3'utr ATP8B FlyBase G50444.1 ATACCCAAACTCCTCAAAAAAGCACAAAAATCCCTTCTCGCGTATTTATATCATCGTTGACTGCATTTAAGAGAGTGAGCCCCCTGAATGATTGATTGTGTGGTTGGTTTTGAGGACTTAGAATAGGTTATATTAAGTTTATACTGTCTTTGGGAAACTGAAAGTGTACTTAATTGCTTAAATATGTGCTGTGTGCTTAGCCAATATAACTGCGGTGCTTGCCACCGATCAGAGTAGCTTATCTACAAATAGCTGAACGAACTCTCGTCTCAAAGTCCAATGCTATATGCTATATACCATATACTACCCCCAAC 933 12068955 0.986438504 62 912 7764 0.976525822 2.238882089 0.36713615 0.120042872 0.229107981 933 20 5 1040 3R:12068806-12069119 6 ATP8B FBtr0339643|FBtr0339644|FBtr0307015|FBtr0307016|FBtr0300351|FBtr0339646|FBtr0339645 12068373|12068373|12068373|12068373|12068373|12068373|12068373 12069582|12069582|12069582|12069582|12069582|12069582|12069582 ATGTGC 6mer3-8 dme-miR-305-3p 3R - 12068886 12069078 3'utr ATP8B FlyBase G38118.1 GTATTTATATCATCGTTGACTGCATTTAAGAGAGTGAGCCCCCTGAATGATTGATTGTGTGGTTGGTTTTGAGGACTTAGAATAGGTTATATTAAGTTTATACTGTCTTTGGGAAACTGAAAGTGTACTTAATTGCTTAAATATGTGCTGTGTGCTTAGCCAATATAACTGCGGTGCTTGCCACCGATCAGAG 720 12068955 0.895378629 40 693 5933 0.964545455 2.071472874 0.398181818 0.375521558 0.591818182 719 31 8 1061 3R:12068886-12069078 6 247.5 3571 FBgn0037989 9025.686667 173.8733333 265.4733333 0.027421736 1.423450021 0.932297029 19 19 19 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 12068947 12068954 - 3R_12068947_12068954_- 0.500120318 0.500120318 0.500120318 0 ATP8B FBtr0339645|FBtr0339646|FBtr0300351|FBtr0307016|FBtr0307015|FBtr0339644|FBtr0339643 12068373|12068373|12068373|12068373|12068373|12068373|12068373 12069582|12069582|12069582|12069582|12069582|12069582|12069582 3R - 12068806 12069119 3'utr ATP8B FlyBase G50444.1 ATACCCAAACTCCTCAAAAAAGCACAAAAATCCCTTCTCGCGTATTTATATCATCGTTGACTGCATTTAAGAGAGTGAGCCCCCTGAATGATTGATTGTGTGGTTGGTTTTGAGGACTTAGAATAGGTTATATTAAGTTTATACTGTCTTTGGGAAACTGAAAGTGTACTTAATTGCTTAAATATGTGCTGTGTGCTTAGCCAATATAACTGCGGTGCTTGCCACCGATCAGAGTAGCTTATCTACAAATAGCTGAACGAACTCTCGTCTCAAAGTCCAATGCTATATGCTATATACCATATACTACCCCCAAC 933 12068955 0.986438504 62 912 7764 0.976525822 2.238882089 0.36713615 0.120042872 0.229107981 933 20 5 1040 3R:12068806-12069119 8 ATP8B FBtr0339643|FBtr0339644|FBtr0307015|FBtr0307016|FBtr0300351|FBtr0339646|FBtr0339645 12068373|12068373|12068373|12068373|12068373|12068373|12068373 12069582|12069582|12069582|12069582|12069582|12069582|12069582 GTACTTAA 8mer-A1 dme-miR-252-5p 3R - 12068886 12069078 3'utr ATP8B FlyBase G38118.1 GTATTTATATCATCGTTGACTGCATTTAAGAGAGTGAGCCCCCTGAATGATTGATTGTGTGGTTGGTTTTGAGGACTTAGAATAGGTTATATTAAGTTTATACTGTCTTTGGGAAACTGAAAGTGTACTTAATTGCTTAAATATGTGCTGTGTGCTTAGCCAATATAACTGCGGTGCTTGCCACCGATCAGAG 720 12068955 0.895378629 40 693 5933 0.964545455 2.071472874 0.398181818 0.375521558 0.591818182 719 31 8 1061 3R:12068886-12069078 8 418.5 3572 FBgn0037989 9025.686667 173.8733333 265.4733333 0.046367663 2.406924581 1.576429522 1 1 1 0.01 dme-miR-1006-3p 6mer2-7 GAATTT 3R 12069187 12069192 - 3R_12069187_12069192_- 1 0.999845066 0.999922533 0.000109531 ATP8B FBtr0339645|FBtr0339646|FBtr0300351|FBtr0307016|FBtr0307015|FBtr0339644|FBtr0339643 12068373|12068373|12068373|12068373|12068373|12068373|12068373 12069582|12069582|12069582|12069582|12069582|12069582|12069582 3R - 12069181 12069290 3'utr ATP8B FlyBase G50445.1 GTATTTCAACTAGAAGCCCGTAAATCATCGTACAATGTCATAAGAAGCCTATTTATTATAACGAATAATCTCCCCTTCAGAACTCACTTAATCAATAAGAATTTCATCAC 27 12069215 0.823999757 11 26 172 0.970588235 1.51851394 0.058823529 0.185185185 0.352941176 27 1 0 33 3R:12069181-12069290 6 ATP8B FBtr0339643|FBtr0339644|FBtr0307015|FBtr0307016|FBtr0300351|FBtr0339646|FBtr0339645 12068373|12068373|12068373|12068373|12068373|12068373|12068373 12069582|12069582|12069582|12069582|12069582|12069582|12069582 GAATTT 6mer2-7 dme-miR-1006-3p 3R - 12069125 12069276 3'utr ATP8B FlyBase G38119.1 AGCCCGTAAATCATCGTACAATGTCATAAGAAGCCTATTTATTATAACGAATAATCTCCCCTTCAGAACTCACTTAATCAATAAGAATTTCATCACCTTTACATCCCCTAATATTATAGCAAGGTCATATCCTTTCCTGTGACAATCCAGTA 36 12069215 0.982574963 18 31 250 0.833333333 1.301029996 0 0.305555556 0.479166667 36 7 1 40 3R:12069125-12069276 6 3.5 3573 FBgn0037989 9025.686667 173.8733333 265.4733333 0.000387782 0.020129596 0.013183998 23 23 23 0.01 dme-miR-8-3p 7mer-A1 AGTATTA 3R 12069382 12069388 - 3R_12069382_12069388_- 0.823349562 0.823349562 0.823349562 0 ATP8B FBtr0339645|FBtr0339646|FBtr0300351|FBtr0307016|FBtr0307015|FBtr0339644|FBtr0339643 12068373|12068373|12068373|12068373|12068373|12068373|12068373 12069582|12069582|12069582|12069582|12069582|12069582|12069582 3R - 12069371 12069431 3'utr ATP8B FlyBase G50446.1 TTTAGATCTGTGTGAGTGTGAGCCAAAAAACCAAAATTGAACAAGTATTATGAAGAACGCA 36 12069394 0.692087629 10 33 170 0.909090909 1.124938737 0.227272727 0.194444444 0.340909091 36 2 2 40 3R:12069371-12069431 7 ATP8B FBtr0339643|FBtr0339644|FBtr0307015|FBtr0307016|FBtr0300351|FBtr0339646|FBtr0339645 12068373|12068373|12068373|12068373|12068373|12068373|12068373 12069582|12069582|12069582|12069582|12069582|12069582|12069582 AGTATTA 7mer-A1 dme-miR-8-3p 3R - 12069370 12069431 3'utr ATP8B FlyBase G38121.1 TTTAGATCTGTGTGAGTGTGAGCCAAAAAACCAAAATTGAACAAGTATTATGAAGAACGCAT 40 12069394 0.800170988 8 39 190 0.968253968 1.785329835 0.206349206 0.45 0.650793651 40 2 0 61 3R:12069370-12069431 7 21 3574 FBgn0037989 9025.686667 173.8733333 265.4733333 0.002326693 0.120777578 0.07910399 6 6 6 0.01 "dme-miR-995-3p,dme-miR-998-3p" 6mer2-7 GGTGCT 3R 12069565 12069570 - 3R_12069565_12069570_- 1 1 1 0 ATP8B FBtr0339645|FBtr0339646|FBtr0300351|FBtr0307016|FBtr0307015|FBtr0339644|FBtr0339643 12068373|12068373|12068373|12068373|12068373|12068373|12068373 12069582|12069582|12069582|12069582|12069582|12069582|12069582 3R - 12069497 12069722 stop_codon ATP8B FlyBase G50447.1 AGAACCAAAACCACTCGTCGATGGCAGACATAACGGCCGATGGGCGGGGCAATGGGGGAGATGATGGCAGAGGAAGTGGAGGCTCAGATGATATGAGTCCTCGTGCTCCCTGCCAGGACCTGGATACGATTAATCTCTAAGCTTTAGATGCAGGTGCTGGATCGGTAGCGGGTTTAGTAACAAACACCAAAAACTATAGGGAATTTAAGTTAGCGAACACTAAGAT 203 12069593 0.977334803 31 166 1161 0.82278481 1.68797462 0.23628692 0.142857143 0.265822785 203 39 3 195 3R:12069497-12069722 6 ATP8B FBtr0339643|FBtr0339644|FBtr0307015|FBtr0307016|FBtr0300351|FBtr0339646|FBtr0339645 12068373|12068373|12068373|12068373|12068373|12068373|12068373 12069582|12069582|12069582|12069582|12069582|12069582|12069582 GGTGCT 6mer2-7 "dme-miR-995-3p,dme-miR-998-3p" 3R - 12069480 12069694 stop_codon ATP8B FlyBase G38122.1 CATAACGGCCGATGGGCGGGGCAATGGGGGAGATGATGGCAGAGGAAGTGGAGGCTCAGATGATATGAGTCCTCGTGCTCCCTGCCAGGACCTGGATACGATTAATCTCTAAGCTTTAGATGCAGGTGCTGGATCGGTAGCGGGTTTAGTAACAAACACCAAAAACTATAGGGAATTTAAGTTAGCGAACACTAAGATAAGGATTTAAGTTTTAT 140 12069593 0.978811119 36 118 804 0.848780488 1.939519253 0.258536585 0.378571429 0.575609756 140 30 1 174 3R:12069480-12069694 6 75.5 3575 FBgn0037989 9025.686667 173.8733333 265.4733333 0.008365015 0.434224148 0.28439768 23 23 23 0.01 dme-miR-965-3p 7mer-A1 ACGCTTA 3R 12411560 12411566 + 3R_12411560_12411566_+ 0.823349562 0.823349562 0.823349562 0 CG5196 FBtr0082585|FBtr0082584 12411468|12411468 12411768|12411768 3R + 12411491 12411594 3'utr CG5196 FlyBase G42196.1 TCGATGGCATTCTGTGCCACATTCGGCTTGTATATAGAATTAGATTCCGCTTGGAGACTCGACTGTTTAACGCTTAGCCAGGCCGTCATCCCGTTTACTCTGTT 63 12411557 0.666139571 14 57 417 0.930555556 1.826074803 0.180555556 0.111111111 0.222222222 63 5 0 67 3R:12411491-12411594 7 CG5196 FBtr0082585|FBtr0082584 12411468|12411468 12411768|12411768 ACGCTTA 7mer-A1 dme-miR-965-3p 3R + 12411512 12411562 3'utr CG5196 FlyBase G31842.1 TTCGGCTTGTATATAGAATTAGATTCCGCTTGGAGACTCGACTGTTTAACG 42 12411556 0.968215978 7 39 266 0.956521739 1.819543936 0.072463768 0.523809524 0.710144928 42 3 0 66 3R:12411512-12411562 3 20.5 3576 FBgn0038039 509 36.03 54.94 0.040275049 0.568970303 0.373134328 3 4 3.5 0.01 dme-miR-92b-3p 6mer2-7 TGCAAT 3R 12421147 12421152 + 3R_12421147_12421152_+ 0.999976297 0.999987915 0.999982106 8.20E-06 pps FBtr0304744|FBtr0082586 12420906|12420906 12421251|12421251 3R + 12421110 12421214 3'utr pps FlyBase G42215.1 AACCCGCCCCGAGCTCCAAATGGATCATCCTTCGCATTGCAATGCAAATTTAGATTCGGTTTTTACATTACGCTCTAACAAATCGTGTACATTTCCTCCGAAAAT 41 12421146 0.985695043 12 40 335 1 1.672097858 0.042553191 0.146341463 0.255319149 41 0 0 47 3R:12421110-12421214 6 pps FBtr0304744|FBtr0082586 12420906|12420906 12421251|12421251 TGCAAT 6mer2-7 dme-miR-92b-3p 3R + 12421124 12421190 3'utr pps FlyBase G31855.1 TCCAAATGGATCATCCTTCGCATTGCAATGCAAATTTAGATTCGGTTTTTACATTACGCTCTAACAA 25 12421145 0.776797677 10 24 214 0.911764706 1.491361694 0.176470588 0.28 0.470588235 25 3 0 31 3R:12421124-12421190 6 20 3577 FBgn0082831 827.4033333 14.92333333 22.97333333 0.024172008 1.340183158 0.870574579 1 2 1.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3R 12458229 12458234 + 3R_12458229_12458234_+ 1 1 1 0 trus FBtr0082634 12458206 12458444 3R + 12458217 12458262 3'utr trus FlyBase G42259.1 CACGGCCATTTCCCAAAGCCATTAGAGTCATTCGCTGTAGCCGCTA 56 12458238 0.865639438 3 56 380 1 1.812913357 0.430769231 0.160714286 0.276923077 56 0 0 65 3R:12458217-12458262 6 trus FBtr0082634 12458206 12458444 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 12458219 12458312 3'utr trus FlyBase G31900.1 CGGCCATTTCCCAAAGCCATTAGAGTCATTCGCTGTAGCCGCTACGATTGCAGACTGGTGCAACGAATTTTAAACGCAAACTGCAGAGATAAAG 30 12458238 0.973560636 9 30 177 1 1.602059991 0.35 0.233333333 0.425 30 0 0 40 3R:12458219-12458312 6 36 3578 FBgn0038055 142.6666667 10.03 15.44333333 0.252336449 3.589232303 2.331102957 -9 -9 -9 0.01 dme-miR-79-3p 6mer2-7 AGCTTT 3R 12458370 12458375 + 3R_12458370_12458375_+ 1 1 1 0 trus FBtr0082634 12458206 12458444 3R + 12458309 12458386 3'utr trus FlyBase G42260.1 AAAGCTAAGCTTCTCGATTGTCCTAGGAAGATTTTATGCTCTAGTTGTTAAGAACGTTGTAAGCTTTTAGACACTCCA 10 12458367 0.987154186 8 9 81 1 1 0.1 0 0 10 0 0 10 3R:12458309-12458386 6 trus FBtr0082634 12458206 12458444 AGCTTT 6mer2-7 dme-miR-79-3p 3R + 12458358 12458386 3'utr trus FlyBase G31901.1 AAGAACGTTGTAAGCTTTTAGACACTCCA 6 12458376 0.858390259 4 6 35 1 0.77815125 0 0 0 6 0 0 6 3R:12458358-12458386 6 4.5 3579 FBgn0038055 142.6666667 10.03 15.44333333 0.031542056 0.448654038 0.29138787 3 -6 -1.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 12511283 12511288 + 3R_12511283_12511288_+ 1 1 1 0 Hsp70Bc FBtr0082638 12511242 12511461 3R + 12511258 12511363 3'utr Hsp70Bc FlyBase G42295.1 TTATTTCGGCTTAAGTTTTTAAAAGTGATCTTAATAGTTGAGTGCCATAAAAAAATGTACATATCTTCAACTATAGTATTATACTCATATGTTAGCAACCCATTGT 190 12511283 0.842225106 22 173 1799 0.915178571 2.311753861 0.375 0.136842105 0.267857143 190 19 0 205 3R:12511258-12511363 6 Hsp70Bc FBtr0082638 12511242 12511461 TGATCT 6mer3-8 dme-bantam-3p 3R + 12511262 12511417 3'utr Hsp70Bc FlyBase G31924.1 TTCGGCTTAAGTTTTTAAAAGTGATCTTAATAGTTGAGTGCCATAAAAAAATGTACATATCTTCAACTATAGTATTATACTCATATGTTAGCAACCCATTGTTTTAACTACAAATAATAGCAAAAATAATAATAAATGCAATACTCTTAAGCATTA 115 12511283 0.851973 25 102 1017 0.886904762 1.696065014 0.291666667 0.339130435 0.547619048 115 17 2 149 3R:12511262-12511417 6 115 3580 FBgn0013279 309.6566667 15.58666667 23.73666667 0.371379054 7.378100941 4.844825165 0 0 0 0.01 dme-miR-33-5p 8mer-A1 CAATGCAA 3R 12629492 12629499 + 3R_12629492_12629499_+ 0.634543941 0.634543244 0.634543593 4.95E-07 Snx3 FBtr0082642|FBtr0082641 12629451|12629451 12630495|12630061 3R + 12629305 12629529 stop_codon Snx3 FlyBase G42297.1 CATCGAGGAGCGGCGCAAGGGACTGGAGGCCTTCATCAACAAGATAGCCGGACATCCGCTGGCGCAGAACGAGCGCTGCCTGCATATGTTCCTGCAGGAGAATGTCATAGATAAGAACTACGTGCCCGGCAAGATTCGGAACACATAAGCAGCTTAGTCCGGCGCAATCGAAACCCCCTAACCATAGCAATGCAATGAAGCAAAAACTCGAACGAACAAACCTGC 50 12629489 0.919818627 17 48 163 0.980769231 1.40654018 0.326923077 0.04 0.076923077 50 0 1 51 3R:12629305-12629529 8 Snx3 FBtr0082642|FBtr0082641 12629451|12629451 12630495|12630061 CAATGCAA 8mer-A1 dme-miR-33-5p 3R + 12629376 12629667 stop_codon Snx3 FlyBase G31927.1 AGCGCTGCCTGCATATGTTCCTGCAGGAGAATGTCATAGATAAGAACTACGTGCCCGGCAAGATTCGGAACACATAAGCAGCTTAGTCCGGCGCAATCGAAACCCCCTAACCATAGCAATGCAATGAAGCAAAAACTCGAACGAACAAACCTGCTACGAAATCTTTATGGGAAGCCGTGTGAATGTGTGTGCTTGCCCGGATTGGAGGAGGATGGAGCAGATGAGCGATGATGTAGGTTGGTGGAGAAGGGATCTGTTATGCGACGCGATACGAGGCGGGAAGTGCTGCTGC 49 12629500 0.949701721 27 46 196 0.974025974 1.875061263 0.324675325 0.448979592 0.649350649 49 2 0 75 3R:12629376-12629667 8 11 3581 FBgn0038065 1577.186667 135.3066667 207.25 0.006974444 0.081296807 0.053075995 3 -8 -2.5 0.01 dme-miR-31a-5p 6mer2-7 CTTGCC 3R 12629567 12629572 + 3R_12629567_12629572_+ 1 1 1 0 Snx3 FBtr0082642|FBtr0082641 12629451|12629451 12630495|12630061 3R + 12629543 12629640 3'utr Snx3 FlyBase G42298.1 TGGGAAGCCGTGTGAATGTGTGTGCTTGCCCGGATTGGAGGAGGATGGAGCAGATGAGCGATGATGTAGGTTGGTGGAGAAGGGATCTGTTATGCGAC 38 12629568 0.95821318 15 33 209 0.891304348 1.311753861 0.47826087 0.131578947 0.282608696 38 4 1 41 3R:12629543-12629640 6 Snx3 FBtr0082642|FBtr0082641 12629451|12629451 12630495|12630061 CTTGCC 6mer2-7 dme-miR-31a-5p 3R + 12629376 12629667 stop_codon Snx3 FlyBase G31927.1 AGCGCTGCCTGCATATGTTCCTGCAGGAGAATGTCATAGATAAGAACTACGTGCCCGGCAAGATTCGGAACACATAAGCAGCTTAGTCCGGCGCAATCGAAACCCCCTAACCATAGCAATGCAATGAAGCAAAAACTCGAACGAACAAACCTGCTACGAAATCTTTATGGGAAGCCGTGTGAATGTGTGTGCTTGCCCGGATTGGAGGAGGATGGAGCAGATGAGCGATGATGTAGGTTGGTGGAGAAGGGATCTGTTATGCGACGCGATACGAGGCGGGAAGTGCTGCTGC 49 12629577 0.949701721 27 46 196 0.974025974 1.875061263 0.324675325 0.448979592 0.649350649 49 2 0 75 3R:12629376-12629667 6 11 3582 FBgn0038065 1577.186667 135.3066667 207.25 0.006974444 0.081296807 0.053075995 -1 -10 -5.5 0.01 dme-miR-2a-2-5p 6mer2-7 GATGAG 3R 12629595 12629600 + 3R_12629595_12629600_+ 1 1 1 0 Snx3 FBtr0082642|FBtr0082641 12629451|12629451 12630495|12630061 3R + 12629543 12629640 3'utr Snx3 FlyBase G42298.1 TGGGAAGCCGTGTGAATGTGTGTGCTTGCCCGGATTGGAGGAGGATGGAGCAGATGAGCGATGATGTAGGTTGGTGGAGAAGGGATCTGTTATGCGAC 38 12629568 0.95821318 15 33 209 0.891304348 1.311753861 0.47826087 0.131578947 0.282608696 38 4 1 41 3R:12629543-12629640 6 Snx3 FBtr0082642|FBtr0082641 12629451|12629451 12630495|12630061 GATGAG 6mer2-7 dme-miR-2a-2-5p 3R + 12629376 12629667 stop_codon Snx3 FlyBase G31927.1 AGCGCTGCCTGCATATGTTCCTGCAGGAGAATGTCATAGATAAGAACTACGTGCCCGGCAAGATTCGGAACACATAAGCAGCTTAGTCCGGCGCAATCGAAACCCCCTAACCATAGCAATGCAATGAAGCAAAAACTCGAACGAACAAACCTGCTACGAAATCTTTATGGGAAGCCGTGTGAATGTGTGTGCTTGCCCGGATTGGAGGAGGATGGAGCAGATGAGCGATGATGTAGGTTGGTGGAGAAGGGATCTGTTATGCGACGCGATACGAGGCGGGAAGTGCTGCTGC 49 12629577 0.949701721 27 46 196 0.974025974 1.875061263 0.324675325 0.448979592 0.649350649 49 2 0 75 3R:12629376-12629667 6 8 3583 FBgn0038065 1577.186667 135.3066667 207.25 0.005072323 0.059124951 0.038600724 27 18 22.5 0.01 dme-miR-980-3p 6mer2-7 GCAGCT 3R 12704567 12704572 + 3R_12704567_12704572_+ 1 1 1 0 Past1 FBtr0082655 12704080 12704875 3R + 12704398 12704631 3'utr Past1 FlyBase G42337.1 AAAGCAGGATGTAGAGTAGCAGCCTAGTGGAATAAGACAAGGAGTGTGTGTTAAGCGCCTAATTGTCATTGTTGACTTAAGGAAAGTGAAGTGTGGATAAACAATTGTTCAATGCCAATGAAAAAAGCATGAGTTAAACTGTATACAATATCTAGGTTAATGTCGATGTGCAGCTTGAAGGGCCATTAATTTGCAATCGTACCACTTTTGATACACAATAAATGTATTTTTGTT 473 12704564 0.976979186 34 459 3347 0.971751412 2.411619706 0.199623352 0.109936575 0.207156309 473 14 1 516 3R:12704398-12704631 6 Past1 FBtr0082655 12704080 12704875 GCAGCT 6mer2-7 dme-miR-980-3p 3R + 12704388 12704616 3'utr Past1 FlyBase G31961.1 AATCGATTGTAAAGCAGGATGTAGAGTAGCAGCCTAGTGGAATAAGACAAGGAGTGTGTGTTAAGCGCCTAATTGTCATTGTTGACTTAAGGAAAGTGAAGTGTGGATAAACAATTGTTCAATGCCAATGAAAAAAGCATGAGTTAAACTGTATACAATATCTAGGTTAATGTCGATGTGCAGCTTGAAGGGCCATTAATTTGCAATCGTACCACTTTTGATACACAAT 317 12704564 0.978762787 25 307 2085 0.965092402 1.973127854 0.170431211 0.372239748 0.59137577 317 13 4 470 3R:12704388-12704616 6 319 3584 FBgn0016693 1355.16 61.20333333 93.61666667 0.235396558 5.212134415 3.407512907 3 3 3 0.01 dme-miR-34-5p 6mer2-7 ACTGCC 3R 12704760 12704765 + 3R_12704760_12704765_+ 1 1 1 0 Past1 FBtr0082655 12704080 12704875 3R + 12704742 12704809 3'utr Past1 FlyBase G42339.1 AAGAGAAACGTGCAATTTACTGCCTGTGCTTCGACTATTTTGTAATTAGTGAATTCTTGAATATTAAA 14 12704777 0.901953916 10 14 127 1 1.380211242 0.083333333 0.357142857 0.625 14 0 0 24 3R:12704742-12704809 6 Past1 FBtr0082655 12704080 12704875 ACTGCC 6mer2-7 dme-miR-34-5p 3R + 12704747 12704777 3'utr Past1 FlyBase G31962.1 AAACGTGCAATTTACTGCCTGTGCTTCGACT 8 12704759 0.611920348 6 8 59 1 1.041392685 0.181818182 0.375 0.545454545 8 0 0 11 3R:12704747-12704777 6 9 3585 FBgn0016693 1355.16 61.20333333 93.61666667 0.006641282 0.147050814 0.096136728 -17 1 -8 0.01 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 12705588 12705595 - 3R_12705588_12705595_- 0.631136385 0.631136385 0.631136385 0 mus308 FBtr0082662 12705521 12705670 3R - 12705527 12705658 3'utr mus308 FlyBase G50655.1 TTTTATAGATTTGTAATCAATTTGTTTAAAGACTGAATGTTTTAGGACTGCTTGGCCTGCCACTCCGTCCATGATCCGGCATAAGCCTTGGCGCTGCAATTGATTAATAAATAATTGTACATATCTTTTAAA 210 12705595 0.982086269 23 192 1423 0.905882353 1.886490725 0.101960784 0.19047619 0.333333333 210 22 2 231 3R:12705527-12705658 8 mus308 FBtr0082662 12705521 12705670 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R - 12705560 12705653 3'utr mus308 FlyBase G38284.1 TAGATTTGTAATCAATTTGTTTAAAGACTGAATGTTTTAGGACTGCTTGGCCTGCCACTCCGTCCATGATCCGGCATAAGCCTTGGCGCTGCAA 136 12705595 0.732745538 20 126 897 0.923423423 2.010723865 0.207207207 0.463235294 0.671171171 136 16 1 205 3R:12705560-12705653 8 103.5 3586 FBgn0002905 561.1366667 10.60333333 16.29666667 0.184447045 9.761081421 6.350992023 0 0 0 0.01 dme-miR-14-3p 8mer-A1 AAGACTGA 3R 12705623 12705630 - 3R_12705623_12705630_- 0.643435318 0.380194193 0.511814755 0.186139567 mus308 FBtr0082662 12705521 12705670 3R - 12705527 12705658 3'utr mus308 FlyBase G50655.1 TTTTATAGATTTGTAATCAATTTGTTTAAAGACTGAATGTTTTAGGACTGCTTGGCCTGCCACTCCGTCCATGATCCGGCATAAGCCTTGGCGCTGCAATTGATTAATAAATAATTGTACATATCTTTTAAA 210 12705634 0.982086269 23 192 1423 0.905882353 1.886490725 0.101960784 0.19047619 0.333333333 210 22 2 231 3R:12705527-12705658 8 mus308 FBtr0082662 12705521 12705670 AAGACTGA 8mer-A1 dme-miR-14-3p 3R - 12705560 12705653 3'utr mus308 FlyBase G38284.1 TAGATTTGTAATCAATTTGTTTAAAGACTGAATGTTTTAGGACTGCTTGGCCTGCCACTCCGTCCATGATCCGGCATAAGCCTTGGCGCTGCAA 136 12705636 0.732745538 20 126 897 0.923423423 2.010723865 0.207207207 0.463235294 0.671171171 136 16 1 205 3R:12705560-12705653 8 54 3587 FBgn0002905 561.1366667 10.60333333 16.29666667 0.096233241 5.092738133 3.313561055 4 6 5 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 12713182 12713187 - 3R_12713182_12713187_- 1 1 1 0 Men FBtr0082661|FBtr0330025|FBtr0082660 12713101|12713101|12713101 12713471|12713471|12713471 3R - 12713143 12713251 3'utr Men FlyBase G50663.1 AAATGGAATGTCATCAGCTTGCGGCGCGCGATTTTGTATAATGCTAACTATGTAAATGGGATATTGATCTAATAGATATGTAAACAAATTTTATGTAATCTTGAACAAC 818 12713188 0.760165803 21 802 6506 0.979360165 2.375206221 0.682146543 0.163814181 0.294117647 818 17 3 949 3R:12713143-12713251 6 Men FBtr0330025|FBtr0082660|FBtr0082661 12713101|12713101|12713101 12713471|12713471|12713471 TGATCT 6mer3-8 dme-bantam-3p 3R - 12713157 12713244 3'utr Men FlyBase G38290.1 ATGTCATCAGCTTGCGGCGCGCGATTTTGTATAATGCTAACTATGTAAATGGGATATTGATCTAATAGATATGTAAACAAATTTTATG 494 12713188 0.771595117 19 479 3950 0.974160207 2.57634135 0.666666667 0.410931174 0.624031008 494 19 1 754 3R:12713157-12713244 6 641 3588 FBgn0002719 1553 77.69 118.1366667 0.412749517 8.250740121 5.425919133 1 1 1 0.01 dme-miR-305-3p 7mer-A1 TGTGCCA 3R 12950172 12950178 - 3R_12950172_12950178_- 0.782847502 0.782911824 0.782879663 4.55E-05 grsm FBtr0082730|FBtr0344095 12950040|12950040 12950195|12950195 3R - 12950139 12950213 stop_codon grsm FlyBase G50683.1 CGCTGGTGCCGCGATTAACTCAGCCTGCCTTTTACTGTGCCACGTGCCTGACTGGATTAACATTTCCATCATTTT 16 12950183 0.982459633 11 14 107 0.842105263 0.726998728 0.315789474 0.1875 0.315789474 16 1 2 16 3R:12950139-12950213 7 grsm FBtr0082730|FBtr0344095 12950040|12950040 12950195|12950195 TGTGCCA 7mer-A1 dme-miR-305-3p 3R - 12950154 12950209 stop_codon grsm FlyBase G38306.1 GGTGCCGCGATTAACTCAGCCTGCCTTTTACTGTGCCACGTGCCTGACTGGATTAA 10 12950195 0.988853232 5 8 64 0.764705882 0.812913357 0.411764706 0.5 0.705882353 10 3 1 13 3R:12950154-12950209 7 4 3589 FBgn0040493 1111.996667 68.50333333 104.3933333 0.003597133 0.058391319 0.038316623 5 17 11 0.01 dme-miR-304-5p 7mer-m8 TGAGATT 3R 12984373 12984379 + 3R_12984373_12984379_+ 0.620203442 0.620203442 0.620203442 0 Paip2 FBtr0082693 12984239 12985488 3R + 12984113 12984480 stop_codon Paip2 FlyBase G42354.1 CGGACGAGCAGAACACGGCACTTTCCGCACTACCCAAGAGCCAGTGTGATGTTGAAAAGTCTGTTCTGAATCCGATGGCTGATGAGTTTGTTCCGCGTTGTCATGTTATAGATTTCCCTGCCTCATAAAGCCAGCCCATATCTCCTGCCCGCCACAGAATCACAAACTACCCCGAACCCGTACCACGTGGACCTCATACGCGAAAAACCTTAGATAAACTGAAGACCCATTGCTAAGACTAGACTAACAGATTCCGCTAATGAGATTGATATTGATATTCTGACCAAGTTGAGCCAGATGGAGCATTGGGAGCAGTGGCTCATGAATATCTTATTTCTAGATACCAAAATGCTGGAAAAGAAAACTAA 582 12984373 0.96967329 55 560 3164 0.964285714 1.829303773 0.205714286 0.161512027 0.302857143 582 16 9 675 3R:12984113-12984480 7 Paip2 FBtr0082693 12984239 12985488 TGAGATT 7mer-m8 dme-miR-304-5p 3R + 12984213 12984483 stop_codon Paip2 FlyBase G31972.1 TCATGTTATAGATTTCCCTGCCTCATAAAGCCAGCCCATATCTCCTGCCCGCCACAGAATCACAAACTACCCCGAACCCGTACCACGTGGACCTCATACGCGAAAAACCTTAGATAAACTGAAGACCCATTGCTAAGACTAGACTAACAGATTCCGCTAATGAGATTGATATTGATATTCTGACCAAGTTGAGCCAGATGGAGCATTGGGAGCAGTGGCTCATGAATATCTTATTTCTAGATACCAAAATGCTGGAAAAGAAAACTAAATA 347 12984373 0.948630023 33 333 1728 0.954022989 2.220108088 0.168582375 0.342939481 0.563218391 347 22 2 498 3R:12984213-12984483 7 158.5 3590 FBgn0038100 1800.366667 110.8333333 168.6533333 0.088037622 1.430075188 0.939797612 0 0 0 0.01 dme-miR-999-3p 6mer2-7 GTTAAC 3R 12985120 12985125 + 3R_12985120_12985125_+ 1 1 1 0 Paip2 FBtr0082693 12984239 12985488 3R + 12985061 12985184 3'utr Paip2 FlyBase G42357.1 TAATCTTTCACCATTGTTAACTCGTTGTACGTTCTATGCCCAAGTAACAAGAAGCGCTTGTTAACCTTCCCTACTGACTCGCAATATTTGTAATTTACCAATATAATCTAGTGAACTAAACGAA 62 12985127 0.754702992 16 60 435 0.974025974 1.875061263 0.155844156 0.177419355 0.337662338 62 2 0 75 3R:12985061-12985184 6 Paip2 FBtr0082693 12984239 12985488 GTTAAC 6mer2-7 dme-miR-999-3p 3R + 12985065 12985151 3'utr Paip2 FlyBase G31974.1 CTTTCACCATTGTTAACTCGTTGTACGTTCTATGCCCAAGTAACAAGAAGCGCTTGTTAACCTTCCCTACTGACTCGCAATATTTGT 39 12985128 0.979524652 12 39 271 1 1.77815125 0.033333333 0.435897436 0.633333333 39 0 0 60 3R:12985065-12985151 6 37 3591 FBgn0038100 1800.366667 110.8333333 168.6533333 0.020551369 0.333834586 0.219384932 -7 -8 -7.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 12985241 12985246 + 3R_12985241_12985246_+ 1 1 1 0 Paip2 FBtr0082693 12984239 12985488 3R + 12985192 12985305 3'utr Paip2 FlyBase G42358.1 ACTAATGTTTAACGCCTCTTTATACAAACATCATGCATAAATATGTATATCTAGTGTTAATGGAGGAGACAACAGACAACAACAACGCTGCAATAACAAGTAGTTTGTAATTTT 47 12985251 0.951726401 13 44 247 0.944444444 1.707570176 0.111111111 0.14893617 0.259259259 47 3 0 51 3R:12985192-12985305 6 Paip2 FBtr0082693 12984239 12985488 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 12985192 12985305 3'utr Paip2 FlyBase G31975.1 ACTAATGTTTAACGCCTCTTTATACAAACATCATGCATAAATATGTATATCTAGTGTTAATGGAGGAGACAACAGACAACAACAACGCTGCAATAACAAGTAGTTTGTAATTTT 55 12985252 0.961866216 11 43 292 0.811764706 1.537819095 0.070588235 0.381818182 0.6 55 15 1 69 3R:12985192-12985305 6 15.5 3592 FBgn0038100 1800.366667 110.8333333 168.6533333 0.008609357 0.139849624 0.091904498 -10 -11 -10.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 12985473 12985479 + 3R_12985473_12985479_+ 0.801970423 0.801970423 0.801970423 0 Paip2 FBtr0082693|FBtr0082693|FBtr0082693 12984239|12984239|12984239 12985488|12985488|12985488 3R + 12985356 12985494 3'utr Paip2 FlyBase G42359.1 AATATCGTTAAAATTCGTTTCGGCATGTAGACAAAGATGAATTTCTATTTTTTCAATCAACTTAGATTTAGTGACTTAAGACAGCATTATAAGATCTACTACATTACTTACGTTACGTGTGATATAAAGATACAAAAAA 266 12985468 0.985411281 29 227 1871 0.847560976 1.745074792 0.176829268 0.203007519 0.353658537 266 46 4 278 3R:12985356-12985494 7 Paip2 FBtr0082693|FBtr0082693|FBtr0082693 12984239|12984239|12984239 12985488|12985488|12985488 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 12985409 12985493 3'utr Paip2 FlyBase G31976.2 CAATCAACTTAGATTTAGTGACTTAAGACAGCATTATAAGATCTACTACATTACTTACGTTACGTGTGATATAAAGATACAAAAA 179 12985468 0.692630658 20 160 1228 0.891525424 1.942834494 0.183050847 0.430167598 0.654237288 179 30 2 263 3R:12985409-12985493 7 167.5 3593 FBgn0038100 1800.366667 110.8333333 168.6533333 0.093036604 1.511278195 0.993161515 5 5 5 0.01 dme-miR-33-5p 6mer3-8 CAATGC 3R 12990175 12990180 + 3R_12990175_12990180_+ 1 1 1 0 CG31342 FBtr0113404 12990027 12991543 3R + 12990155 12990247 3'utr CG31342 FlyBase G42375.1 AAGGAACACCCTGTGCTCTACAATGCCCTACACATCGGTGATCAGCTACTGTCCATAGCAGGTGTGAGCATTAGCAGTGCAGCTGAGGCCAAC 23 12990196 0.933213193 9 22 112 0.966666667 1.462397998 0.166666667 0.260869565 0.433333333 23 1 0 29 3R:12990155-12990247 6 CG31342 FBtr0113404 12990027 12991543 CAATGC 6mer3-8 dme-miR-33-5p 3R + 12990136 12990219 3'utr CG31342 FlyBase G31994.1 GATTGCAGGCTGGAAGCAGAAGGAACACCCTGTGCTCTACAATGCCCTACACATCGGTGATCAGCTACTGTCCATAGCAGGTGT 13 12990198 0.973748711 7 12 75 0.956521739 1.041392685 0.173913043 0.461538462 0.695652174 13 0 1 22 3R:12990136-12990219 6 6 3594 FBgn0051342 1698.813333 51.87 79.48333333 0.003531877 0.1156738 0.075487524 -21 -23 -22 0.01 dme-miR-965-3p 6mer3-8 TACGCT 3R 12990268 12990273 + 3R_12990268_12990273_+ 1 1 1 0 CG31342 FBtr0113404 12990027 12991543 3R + 12990256 12990278 3'utr-intron CG31342 FlyBase G42376.1 AAGGAACACCAATACGCTATTTG 14 12990268 0.933052288 3 12 58 0.857142857 0.77815125 0.428571429 0 0 14 1 1 12 3R:12990256-12990278 6 CG31342 FBtr0113404 12990027 12991543 TACGCT 6mer3-8 dme-miR-965-3p 3R + 12990248 12990279 3'utr-intron CG31342 FlyBase G31995.1 AAGATAATAAGGAACACCAATACGCTATTTGT 10 12990268 0.957266759 3 9 43 0.933333333 1.146128036 0.333333333 0.5 0.666666667 10 1 0 14 3R:12990248-12990279 6 12 3595 FBgn0051342 1698.813333 51.87 79.48333333 0.007063754 0.2313476 0.150975047 0 0 0 0.01 dme-miR-995-5p 7mer-m1 ATTCGGG 3R 12990422 12990428 + 3R_12990422_12990428_+ 0.825582373 0.825582373 0.825582373 0 CG31342 FBtr0113404 12990027 12991543 3R + 12990393 12990467 3'utr CG31342 FlyBase G42377.1 GTGACCGCGAGGGTCAGTGCCTGGGTCTGATTCGGGATGGAAACACTTCGACAATCGTGGATGTGGTGCCAAATA 14 12990422 0.959971955 6 14 75 1 1.204119983 0.4375 0.142857143 0.25 14 0 0 16 3R:12990393-12990467 7 CG31342 FBtr0113404 12990027 12991543 ATTCGGG 7mer-m1 dme-miR-995-5p 3R + 12990402 12990436 3'utr CG31342 FlyBase G31996.1 AGGGTCAGTGCCTGGGTCTGATTCGGGATGGAAAC 5 12990410 0.876938063 2 4 32 0.888888889 0.602059991 0.666666667 0.4 0.666666667 5 0 1 8 3R:12990402-12990436 7 5.5 3596 FBgn0051342 1698.813333 51.87 79.48333333 0.003237554 0.106034317 0.069196897 0 12 6 0.01 dme-miR-7-5p 7mer-m8 GTCTTCC 3R 12990486 12990492 + 3R_12990486_12990492_+ 0.705950313 0.705950313 0.705950313 0 CG31342 FBtr0113404 12990027 12991543 3R + 12990468 12990499 3'utr CG31342 FlyBase G42378.1 GTTTGGCTGCACGTCACGGTCTTCCGCCCAAG 28 12990489 0.723575395 2 27 141 0.9375 1 0.71875 0.142857143 0.25 28 0 2 30 3R:12990468-12990499 7 CG31342 FBtr0113404 12990027 12991543 GTCTTCC 7mer-m8 dme-miR-7-5p 3R + 12990438 12990499 3'utr CG31342 FlyBase G31997.1 CTTCGACAATCGTGGATGTGGTGCCAAATAGTTTGGCTGCACGTCACGGTCTTCCGCCCAAG 10 12990489 0.780740184 4 10 56 1 1.255272505 0.444444444 0.7 0.833333333 10 0 0 18 3R:12990438-12990499 7 17 3597 FBgn0051342 1698.813333 51.87 79.48333333 0.010006985 0.327742433 0.213881317 -3 -3 -3 0.01 dme-miR-252-5p 7mer-m1 TACTTAG 3R 12990754 12990760 + 3R_12990754_12990760_+ 0.702971752 0.702971752 0.702971752 0 CG31342 FBtr0113404 12990027 12991543 3R + 12990631 12990771 stop_codon CG31342 FlyBase G42380.1 AAGGATTTCGAGATACGCGACCGCCTGAACTCCGTGGGACGCGATATATCCATTTTGGTGCAACCGTCGGATTTGATAACCAAGCTGAAAAAGCAGCTGAAGTCGCTGCGCGGCTACAAGGATTACTTAGTGCAGTAGTCA 36 12990753 0.965213092 13 33 200 0.931818182 1.612783857 0.318181818 0.222222222 0.363636364 36 3 0 41 3R:12990631-12990771 7 CG31342 FBtr0113404 12990027 12991543 TACTTAG 7mer-m1 dme-miR-252-5p 3R + 12990673 12990818 stop_codon CG31342 FlyBase G31999.1 GATATATCCATTTTGGTGCAACCGTCGGATTTGATAACCAAGCTGAAAAAGCAGCTGAAGTCGCTGCGCGGCTACAAGGATTACTTAGTGCAGTAGTCACTAGCTATAACGAACGATTCCATATAACCACAAATAACTCTCAACTG 42 12990754 0.892877914 17 36 207 0.85483871 0.821185883 0.209677419 0.357142857 0.564516129 42 2 7 53 3R:12990673-12990818 7 17 3598 FBgn0051342 1698.813333 51.87 79.48333333 0.010006985 0.327742433 0.213881317 1 0 0.5 0.01 dme-miR-999-3p 7mer-A1 GTTAACA 3R 12991234 12991240 + 3R_12991234_12991240_+ 0.823349321 0.823349562 0.823349442 2.12E-07 CG31342 FBtr0113404|FBtr0113403 12990027|12990767 12991543|12991543 3R + 12991173 12991247 3'utr CG31342 FlyBase G42385.1 GAATTTGTTTAGATGCGGAAAAGTTATGAGAAATTTACAACATGAAATTCAAGTATTTTAGGTTAACATATACAC 232 12991230 0.977655096 13 231 2038 0.996183206 2.416640507 0.049618321 0.099137931 0.202290076 232 1 0 261 3R:12991173-12991247 7 CG31342 FBtr0113403|FBtr0113404 12990767|12990027 12991543|12991543 GTTAACA 7mer-A1 dme-miR-999-3p 3R + 12991168 12991251 3'utr CG31342 FlyBase G32003.1 ACCTCGAATTTGTTTAGATGCGGAAAAGTTATGAGAAATTTACAACATGAAATTCAAGTATTTTAGGTTAACATATACACGCGT 187 12991230 0.904181126 12 181 1610 0.971631206 1.738780558 0.042553191 0.368983957 0.581560284 187 4 4 274 3R:12991168-12991251 7 184.5 3599 FBgn0051342 1698.813333 51.87 79.48333333 0.108605222 3.556969346 2.32124135 4 4 4 0.01 dme-miR-317-5p 6mer3-8 GTATCC 3R 12991281 12991286 + 3R_12991281_12991286_+ 0.999999998 0.999999947 0.999999973 7.07E-08 CG31342 FBtr0113404|FBtr0113403 12990027|12990767 12991543|12991543 3R + 12991260 12991405 3'utr CG31342 FlyBase G42386.1 CACACACAACTGTGCAACTTAGTATCCTTATGCAATATTGGAGTGCCTCTGATTTTGTTCATTGATGTTGTTTTCTTTCATGTTTTCATTTGTTTCGTGCGAAAAGACATACGCATCTGTCGTAACATATAAGATGTGATAAAAAT 26 12991280 0.989631364 19 25 198 0.96875 1.190331698 0.0625 0.076923077 0.25 26 0 1 31 3R:12991260-12991405 6 CG31342 FBtr0113403|FBtr0113404 12990767|12990027 12991543|12991543 GTATCC 6mer3-8 dme-miR-317-5p 3R + 12991259 12991330 3'utr CG31342 FlyBase G32004.1 ACACACACAACTGTGCAACTTAGTATCCTTATGCAATATTGGAGTGCCTCTGATTTTGTTCATTGATGTTGT 23 12991279 0.866605697 12 21 183 0.90625 1.462397998 0.375 0.347826087 0.53125 23 3 0 29 3R:12991259-12991330 6 11 3600 FBgn0051342 1698.813333 51.87 79.48333333 0.006475108 0.212068633 0.138393793 1 2 1.5 0.01 dme-miR-190-5p 6mer3-8 ACATAT 3R 12991437 12991442 + 3R_12991437_12991442_+ 1 1 1 0 CG31342 FBtr0113404|FBtr0113403 12990027|12990767 12991543|12991543 3R + 12991410 12991512 3'utr CG31342 FlyBase G42386.2 ACTCAAATTTAGGCAATTTTAAACGATACATATGTAAATGCTTTTTGATTTATTTTATTAATAAGTTTCCGTGTGTTATTTCGATAAACATATTACTTATGCG 21 12991454 0.660393913 11 17 213 0.833333333 1 0.208333333 0.095238095 0.208333333 21 3 1 20 3R:12991410-12991512 6 CG31342 FBtr0113403|FBtr0113404 12990767|12990027 12991543|12991543 ACATAT 6mer3-8 dme-miR-190-5p 3R + 12991410 12991538 3'utr CG31342 FlyBase G32006.1 ACTCAAATTTAGGCAATTTTAAACGATACATATGTAAATGCTTTTTGATTTATTTTATTAATAAGTTTCCGTGTGTTATTTCGATAAACATATTACTTATGCGAAAAATTCATTAAAGCAATTCCACGC 26 12991455 0.990415599 18 23 237 0.894736842 1.230448921 0.184210526 0.423076923 0.605263158 26 3 1 34 3R:12991410-12991538 6 9 3601 FBgn0051342 1698.813333 51.87 79.48333333 0.005297816 0.1735107 0.113231285 -17 -18 -17.5 0.01 dme-miR-79-3p 6mer2-7 AGCTTT 3R 12996927 12996932 - 3R_12996927_12996932_- 1 1 1 0 CG44194 FBtr0336814|FBtr0344448 12996874|12996874 12997324|12997324 3R - 12996879 12997108 3'utr CG44194 FlyBase G50704.1 GCGCGTGGACAACTTCGAGCAGCTAAACTCCCTGGAGCGACAGGCCCAAGAGTCGAACGTGGTGGCCGCCTTGGTGAGGGATGCCGGGCGCACTCAGCTGGAATCTGGGACAGCAACGGTCCTCGGACTGGGTCCAGCCCCTGCCGAAGATCTAGACAAATTGGTGGCGCATTTGAAGCTTTTGTGAACTCTTAGGTTTATGCAACGTTACAAATAAAGTACAAGTAATC 448 12996917 0.991141742 31 429 4519 0.964552239 1.868392503 0.235074627 0.171875 0.307835821 448 13 6 517 3R:12996879-12997108 6 CG44194 FBtr0344448|FBtr0336814 12996874|12996874 12997324|12997324 AGCTTT 6mer2-7 dme-miR-79-3p 3R - 12996876 12996994 3'utr CG44194 FlyBase G38319.1 AACGGTCCTCGGACTGGGTCCAGCCCCTGCCGAAGATCTAGACAAATTGGTGGCGCATTTGAAGCTTTTGTGAACTCTTAGGTTTATGCAACGTTACAAATAAAGTACAAGTAATCAAC 280 12996917 0.834872537 21 271 2728 0.96882494 2.606381365 0.24940048 0.360714286 0.570743405 280 13 0 404 3R:12996876-12996994 6 328 3602 FBgn0265083 203.1666667 36.95 56.61333333 1.614438064 8.876860622 5.793688177 -15 -15 -15 0.01 dme-miR-986-5p 6mer3-8 ATTCGA 3R 13021952 13021957 + 3R_13021952_13021957_+ 1 1 1 0 CtBP FBtr0334513|FBtr0082700|FBtr0082702|FBtr0082699 13021676|13021676|13021676|13021676 13024097|13024097|13024097|13024097 3R + 13021928 13022019 3'utr CtBP FlyBase G42473.1 ATACTTCTATTCTTTCTCTGACTCATTCGAAAGTATATATATATAGACGACGGGAGTGGAGCGCGCCAGAGAGAGTATATAACATTTGAAGC 14 13021953 0.979210817 7 11 78 0.7 1.146128036 0.4 0.214285714 0.45 14 6 0 14 3R:13021928-13022019 6 CtBP FBtr0082702|FBtr0082699|FBtr0334513|FBtr0082700 13021676|13021676|13021676|13021676 13024097|13024097|13024097|13024097 ATTCGA 6mer3-8 dme-miR-986-5p 3R + 13021939 13022054 3'utr CtBP FlyBase G32071.1 CTTTCTCTGACTCATTCGAAAGTATATATATATAGACGACGGGAGTGGAGCGCGCCAGAGAGAGTATATAACATTTGAAGCACGATTCAAGAACACACGCTATAAGAGTTGATATA 16 13021943 0.955830125 7 15 70 1 1.230448921 0.235294118 0.133333333 0.235294118 15 0 0 17 3R:13021939-13022054 6 5 3603 FBgn0020496 3905.446667 142.2566667 217.6 0.001280263 0.035147738 0.022977941 -1 9 4 0.01 dme-miR-317-5p 6mer3-8 GTATCC 3R 13022644 13022649 + 3R_13022644_13022649_+ 1 1 1 0 CtBP FBtr0334513|FBtr0082700|FBtr0082702|FBtr0082699 13021676|13021676|13021676|13021676 13024097|13024097|13024097|13024097 3R + 13022642 13022725 3'utr CtBP FlyBase G42478.1 AAGTATCCGGCTTTAACTTTAACCGAAACTAGAAACAATCAGCGAAAAAGTATGTAAAGTAATTAATTATGTTCTGTGTATTTA 9 13022654 0.985055603 8 9 59 1 1 0.1 0.111111111 0.2 9 0 0 10 3R:13022642-13022725 6 CtBP FBtr0082702|FBtr0082699|FBtr0334513|FBtr0082700 13021676|13021676|13021676|13021676 13024097|13024097|13024097|13024097 GTATCC 6mer3-8 dme-miR-317-5p 3R + 13022582 13022662 3'utr CtBP FlyBase G32075.1 TTGTTGTTGATGTTTCGCAACTGACGTCCCTTCATCCCTCCCTCCCAAGAATCCCTCACTAAGTATCCGGCTTTAACTTTA 12 13022654 0.95913258 8 11 82 0.933333333 0.84509804 0 0.166666667 0.333333333 12 0 1 14 3R:13022582-13022662 6 4 3604 FBgn0020496 3905.446667 142.2566667 217.6 0.001024211 0.02811819 0.018382353 -10 -10 -10 0.01 dme-bantam-3p 8mer-A1 TGATCTCA 3R 13022979 13022986 + 3R_13022979_13022986_+ 0.631136385 0.631136385 0.631136385 0 CtBP FBtr0334513|FBtr0082700|FBtr0082702|FBtr0082699 13021676|13021676|13021676|13021676 13024097|13024097|13024097|13024097 3R + 13022943 13023009 3'utr CtBP FlyBase G42481.1 TATTCTGTTGCTCAAGCTCTGCTCTAATTTACAATATGATCTCATCATTCAAGTTTATTTTCGCCTT 84 13022978 0.759827641 12 81 734 0.973684211 2.045322979 0 0.261904762 0.456140351 84 3 0 111 3R:13022943-13023009 8 CtBP FBtr0082702|FBtr0082699|FBtr0334513|FBtr0082700 13021676|13021676|13021676|13021676 13024097|13024097|13024097|13024097 TGATCTCA 8mer-A1 dme-bantam-3p 3R + 13022944 13023006 3'utr CtBP FlyBase G32078.1 ATTCTGTTGCTCAAGCTCTGCTCTAATTTACAATATGATCTCATCATTCAAGTTTATTTTCGC 63 13022978 0.735181047 11 61 538 0.979381443 1.977723605 0 0.380952381 0.597938144 63 2 0 95 3R:13022944-13023006 8 68 3605 FBgn0020496 3905.446667 142.2566667 217.6 0.017411581 0.478009232 0.3125 1 1 1 0.01 dme-miR-2b-2-5p 6mer2-7 TGAAGA 3R 13025506 13025511 + 3R_13025506_13025511_+ 1 1 1 0 CtBP FBtr0334515|FBtr0334516|FBtr0100161|FBtr0334517|FBtr0334514 13025471|13025410|13025471|13025471|13025471 13026275|13026275|13026275|13026275|13026275 3R + 13025471 13025562 stop_codon CtBP FlyBase G42494.1 AGGCATCTGCTGTCCAACTGGCTGCACCTGAGAGCTGAAGAGCTGGAGTTGACGATGACAACGGGCAGTGGCGCAATGGAGTCCAGCACACA 33 13025498 0.871761709 11 33 126 1 1.556302501 0.5 0.090909091 0.166666667 33 0 0 36 3R:13025471-13025562 6 CtBP FBtr0334517|FBtr0334514|FBtr0334515|FBtr0334516|FBtr0100161 13025471|13025471|13025471|13025410|13025471 13026275|13026275|13026275|13026275|13026275 TGAAGA 6mer2-7 dme-miR-2b-2-5p 3R + 13025472 13025522 3'utr CtBP FlyBase G32087.1 GGCATCTGCTGTCCAACTGGCTGCACCTGAGAGCTGAAGAGCTGGAGTTGA 15 13025505 0.850097209 4 15 62 1 1.322219295 0.523809524 0.4 0.571428571 15 0 0 21 3R:13025472-13025522 6 17.5 3606 FBgn0020496 3905.446667 142.2566667 217.6 0.004480922 0.123017082 0.080422794 8 1 4.5 0.01 dme-miR-995-5p 7mer-m8 AATTCGG 3R 13025648 13025654 + 3R_13025648_13025654_+ 0.671715277 0.671510491 0.671612884 0.000144815 CtBP FBtr0334515|FBtr0334516|FBtr0100161|FBtr0334517|FBtr0334514 13025471|13025410|13025471|13025471|13025471 13026275|13026275|13026275|13026275|13026275 3R + 13025593 13025684 3'utr CtBP FlyBase G42495.1 GAGGAGGAGGAGTAGGCGGCGTAGTACGAGCATTGTGGAGCAGTAGACCCCATGGAATTCGGTCCCCAAGGATAAAACTTAACGAGAAACAA 16 13025650 0.957682406 6 14 67 0.857142857 1.255272505 0.19047619 0.25 0.428571429 16 3 0 18 3R:13025593-13025684 7 CtBP FBtr0334517|FBtr0334514|FBtr0334515|FBtr0334516|FBtr0100161 13025471|13025471|13025471|13025410|13025471 13026275|13026275|13026275|13026275|13026275 AATTCGG 7mer-m8 dme-miR-995-5p 3R + 13025625 13025659 3'utr CtBP FlyBase G32088.1 TTGTGGAGCAGTAGACCCCATGGAATTCGGTCCCC 10 13025650 0.726968154 5 9 34 0.941176471 1.204119983 0.176470588 0.5 0.705882353 10 1 0 16 3R:13025625-13025659 7 8.5 3607 FBgn0020496 3905.446667 142.2566667 217.6 0.002176448 0.059751154 0.0390625 -2 -2 -2 0.01 dme-miR-184-3p 6mer3-8 TCCGTC 3R 13025711 13025716 + 3R_13025711_13025716_+ 0.942826762 0.999998916 0.971412839 0.04042678 CtBP FBtr0334515|FBtr0334516|FBtr0100161|FBtr0334517|FBtr0334514 13025471|13025410|13025471|13025471|13025471 13026275|13026275|13026275|13026275|13026275 3R + 13025710 13025754 3'utr CtBP FlyBase G42496.1 ATCCGTCGAATGTGTGGAGTCCTCCCCTATATCCGTGCCGTTTGT 25 13025740 0.798856322 4 22 186 0.866666667 0.937852093 0.066666667 0.2 0.333333333 25 2 2 26 3R:13025710-13025754 6 CtBP FBtr0334517|FBtr0334514|FBtr0334515|FBtr0334516|FBtr0100161 13025471|13025471|13025471|13025410|13025471 13026275|13026275|13026275|13026275|13026275 TCCGTC 6mer3-8 dme-miR-184-3p 3R + 13025703 13025754 3'utr CtBP FlyBase G32089.1 AGTAGTCATCCGTCGAATGTGTGGAGTCCTCCCCTATATCCGTGCCGTTTGT 13 13025740 0.97177892 5 12 94 0.944444444 1.230448921 0.055555556 0.384615385 0.555555556 13 1 0 17 3R:13025703-13025754 6 6 3608 FBgn0020496 3905.446667 142.2566667 217.6 0.001536316 0.042177285 0.027573529 -29 -29 -29 0.01 dme-miR-33-5p 7mer-A1 AATGCAA 3R 13026109 13026115 + 3R_13026109_13026115_+ 0.78291182 0.782911824 0.782911822 0 CtBP FBtr0334515|FBtr0334516|FBtr0100161|FBtr0334517|FBtr0334514 13025471|13025410|13025471|13025471|13025471 13026275|13026275|13026275|13026275|13026275 3R + 13026037 13026130 3'utr CtBP FlyBase G42498.1 AACTTAAGATTTTTATTTGTATTGCAGCCAATTGTAAGTGAAAATATGTTACTACATATAAGCGCAAAAACAAATGCAAATGTTGGAAAATTTT 14 13026117 0.973692626 11 14 92 1 1.176091259 0.066666667 0.071428571 0.133333333 14 0 0 15 3R:13026037-13026130 7 CtBP FBtr0334517|FBtr0334514|FBtr0334515|FBtr0334516|FBtr0100161 13025471|13025471|13025471|13025410|13025471 13026275|13026275|13026275|13026275|13026275 AATGCAA 7mer-A1 dme-miR-33-5p 3R + 13026051 13026123 3'utr CtBP FlyBase G32092.1 ATTTGTATTGCAGCCAATTGTAAGTGAAAATATGTTACTACATATAAGCGCAAAAACAAATGCAAATGTTGGA 10 13026118 0.964679015 5 9 59 0.944444444 1.230448921 0.388888889 0.7 0.833333333 10 1 0 17 3R:13026051-13026123 7 5 3609 FBgn0020496 3905.446667 142.2566667 217.6 0.001280263 0.035147738 0.022977941 -8 -9 -8.5 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3R 13026643 13026648 - 3R_13026643_13026648_- 1 0.998988656 0.999494328 0.000715097 CG12360 FBtr0082718 13026281 13027300 3R - 13026629 13026675 3'utr CG12360 FlyBase G50721.1 AAGTCGTTAGCTAGTACTCTGCAGAATTGTGTTATAAGTGTATAACT 18 13026649 0.826420935 4 18 165 1 1.322219295 0 0.166666667 0.285714286 18 0 0 21 3R:13026629-13026675 6 CG12360 FBtr0082718 13026281 13027300 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 13026595 13026677 3'utr CG12360 FlyBase G38338.1 CCAAGTCGTTAGCTAGTACTCTGCAGAATTGTGTTATAAGTGTATAACTAAAGCTAGAAAAAAAGAGGAATTTTACAAAACGA 25 13026649 0.985563081 6 24 194 0.971428571 1.230448921 0.057142857 0.28 0.485714286 25 0 1 34 3R:13026595-13026677 6 17.5 3610 FBgn0038111 3027.056667 147.83 226.9233333 0.005781193 0.118379219 0.077118557 1 1 1 0.01 dme-miR-184-5p 6mer3-8 TGATAA 3R 13262162 13262167 + 3R_13262162_13262167_+ 1 1 1 0 CG11686 FBtr0082735|FBtr0335222 13262120|13262120 13262227|13262227 3R + 13262143 13262190 3'utr CG11686 FlyBase G42527.1 AATTAACTAAGTGCCTTACTGATAACTCTTGTTTTCAATCATTTTTTA 17 13262159 0.658410539 7 17 153 1 1.322219295 0.047619048 0.176470588 0.333333333 17 0 0 21 3R:13262143-13262190 6 CG11686 FBtr0335222|FBtr0082735 13262120|13262120 13262227|13262227 TGATAA 6mer3-8 dme-miR-184-5p 3R + 13262143 13262182 3'utr CG11686 FlyBase G32118.1 AATTAACTAAGTGCCTTACTGATAACTCTTGTTTTCAATC 20 13262159 0.718139279 5 18 169 0.928571429 1.414973348 0.321428571 0.35 0.535714286 20 2 0 26 3R:13262143-13262182 6 18.5 3611 FBgn0040551 12.66666667 4.276666667 6.6 1.460526316 4.325798909 2.803030303 3 3 3 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3R 13268925 13268930 + 3R_13268925_13268930_+ 1 0.999999988 0.999999994 0 Su(var)3-7 FBtr0301657|FBtr0082736 13268891|13268891 13269210|13270038 3R + 13268848 13268958 stop_codon Su(var)3-7 FlyBase G42544.1 ATCACAACATTTCGGACAATGGTGAACCATAACCGCAGGCCATAGAGCTCCTAGGAAATATGAATCAAACGTAACTTAAGACTTTATCACTGTCATTATTTAAATTCGACT 30 13268932 0.958913893 12 29 189 0.925 1.568201724 0 0.266666667 0.45 30 3 0 37 3R:13268848-13268958 6 Su(var)3-7 FBtr0082736|FBtr0301657 13268891|13268891 13270038|13269210 AAGACT 6mer3-8 dme-miR-14-3p 3R + 13268914 13268968 3'utr Su(var)3-7 FlyBase G32131.1 AAACGTAACTTAAGACTTTATCACTGTCATTATTTAAATTCGACTCAATCAGATA 10 13268932 0.983928261 7 10 77 1 1.230448921 0 0.6 0.764705882 10 0 0 17 3R:13268914-13268968 6 14.5 3612 FBgn0003598 516.8066667 14.16 21.58 0.028056914 1.024011299 0.671918443 -7 -7 -7 0.01 dme-miR-184-3p 7mer-A1 CCGTCCA 3R 13269681 13269687 + 3R_13269681_13269687_+ 0.823349562 0.82325313 0.823301346 6.82E-05 Su(var)3-7 FBtr0082736 13268891 13270038 3R + 13269653 13269708 3'utr Su(var)3-7 FlyBase G42548.1 GTCCAGAAAGCTGCATAGCTCTTCAATCCCGTCCAGTGTCCGACCGAGTTCTTCGC 168 13269679 0.853542176 4 159 1157 0.950819672 1.638489257 0.371584699 0.089285714 0.163934426 168 6 3 174 3R:13269653-13269708 7 Su(var)3-7 FBtr0082736 13268891 13270038 CCGTCCA 7mer-A1 dme-miR-184-3p 3R + 13269652 13269710 3'utr Su(var)3-7 FlyBase G32132.1 CGTCCAGAAAGCTGCATAGCTCTTCAATCCCGTCCAGTGTCCGACCGAGTTCTTCGCTA 67 13269679 0.80390213 5 60 464 0.918604651 1.596597096 0.313953488 0.268656716 0.430232558 67 6 1 79 3R:13269652-13269710 7 115 3613 FBgn0003598 516.8066667 14.16 21.58 0.222520349 8.121468927 5.329008341 2 2 2 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 3R 13269956 13269962 + 3R_13269956_13269962_+ 0.782911824 0.782911824 0.782911824 0 Su(var)3-7 FBtr0082736 13268891 13270038 3R + 13269952 13269987 3'utr Su(var)3-7 FlyBase G42550.1 ATATGTACAAAAGATTGGCTTAGATTTAAGTAGTTT 5 13269969 0.701696443 4 5 41 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 3R:13269952-13269987 7 Su(var)3-7 FBtr0082736 13268891 13270038 GTACAAA 7mer-A1 dme-miR-305-5p 3R + 13269949 13269987 3'utr Su(var)3-7 FlyBase G32133.1 AAAATATGTACAAAAGATTGGCTTAGATTTAAGTAGTTT 6 13269968 0.761742793 3 5 56 0.857142857 0.77815125 0 0.166666667 0.285714286 6 1 0 6 3R:13269949-13269987 7 4.5 3614 FBgn0003598 516.8066667 14.16 21.58 0.008707318 0.31779661 0.208526413 -13 -12 -12.5 0.01 dme-miR-1012-3p 6mer2-7 TGACTA 3R 13312691 13312696 + 3R_13312691_13312696_+ 1 1 1 0 CG32473 FBtr0082742|FBtr0082743|FBtr0082744 13312627|13312627|13312627 13312785|13312785|13312785 3R + 13312673 13312719 3'utr CG32473 FlyBase G42558.1 AAAAACTACCAATGGAAGTGACTATAGTCTTAGCTAATTAGTGAAGC 41 13312702 0.81921807 6 41 257 1 1.72427587 0.20754717 0.219512195 0.396226415 41 0 0 53 3R:13312673-13312719 6 CG32473 FBtr0082744|FBtr0082743|FBtr0082742 13312627|13312627|13312627 13312785|13312785|13312785 TGACTA 6mer2-7 dme-miR-1012-3p 3R + 13312668 13312721 3'utr CG32473 FlyBase G32139.1 AATGTAAAAACTACCAATGGAAGTGACTATAGTCTTAGCTAATTAGTGAAGCAA 45 13312702 0.677156825 8 44 314 0.983050847 1.462397998 0.118644068 0.2 0.389830508 45 0 1 58 3R:13312668-13312721 6 42 3615 FBgn0052473 306.7266667 12.40666667 19.06 0.136929731 3.385276733 2.203567681 -11 -11 -11 0.01 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 13368808 13368815 + 3R_13368808_13368815_+ 0.625364009 0.625364009 0.625364009 0 Dic1 FBtr0346113 13368692 13369278 3R + 13368687 13368893 stop_codon Dic1 FlyBase G42565.1 GAATTAGCCGCGATGCCAATCGATACCTTAACTAGGCAATAATTCTCCTTGGCTGGCTGGCAGATTCCCTTGAGCAATGCAACATTCCAGCAGCAATTCGTTCACCGTGTAGAACATAACTTAGCTTTAGCCCGTTCCAGTTGTTAACCAAGATGCTTTTATGCTAGCAAAATATTTGTTGTTAAGCGTTCAATGCCCGCTATCCCG 214 13368807 0.938636262 25 212 1540 0.992125984 1.924279286 0.255905512 0.135514019 0.271653543 214 0 2 252 3R:13368687-13368893 8 Dic1 FBtr0082748|FBtr0082747|FBtr0346113 13368692|13368692|13368692 13369091|13369091|13369278 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R + 13368780 13368832 3'utr Dic1 FlyBase G32146.1 CAATTCGTTCACCGTGTAGAACATAACTTAGCTTTAGCCCGTTCCAGTTGTTA 112 13368807 0.797299998 6 108 746 0.98816568 2.222716471 0.26035503 0.392857143 0.597633136 112 2 0 167 3R:13368780-13368832 8 127 3616 FBgn0027610 272.8866667 21.36 32.8 0.465394669 5.945692884 3.87195122 1 1 1 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 13429312 13429319 - 3R_13429312_13429319_- 0.500120318 0.500120318 0.500120318 0 yrt FBtr0114375|FBtr0114374|FBtr0114376|FBtr0082793 13428865|13428865|13428865|13428865 13429604|13429604|13430186|13429604 3R - 13429309 13429369 3'utr yrt FlyBase G50773.2 TATATCATATACACCGATGCGATATCGAGGAACGAAATGTGCTAAACCGTGTACTTAATAA 44 13429320 0.827045185 6 39 221 0.892857143 1.096910013 0.553571429 0.227272727 0.392857143 44 3 3 50 3R:13429309-13429369 8 yrt FBtr0114376|FBtr0082793|FBtr0114375|FBtr0114374 13428865|13428865|13428865|13428865 13430186|13429604|13429604|13429604 GTACTTAA 8mer-A1 dme-miR-252-5p 3R - 13429309 13429359 3'utr yrt FlyBase G38379.1 ACACCGATGCGATATCGAGGAACGAAATGTGCTAAACCGTGTACTTAATAA 28 13429320 0.803492703 5 26 135 0.977272727 1.633468456 0.727272727 0.464285714 0.659090909 28 1 0 43 3R:13429309-13429359 8 24.5 3617 FBgn0004049 300.3333333 8.753333333 13.46333333 0.081576027 2.79893374 1.819757366 1 1 1 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 13429388 13429393 - 3R_13429388_13429393_- 0.999989788 1 0.999994894 7.21E-06 yrt FBtr0114375|FBtr0114374|FBtr0114376|FBtr0082793 13428865|13428865|13428865|13428865 13429604|13429604|13430186|13429604 3R - 13429375 13429504 3'utr yrt FlyBase G50774.1 TATCGTAGACAAACTTAGACGAGTTTTAAGCATTCCAAGCGAGAGCAACGACAAAAAGACAATGAGAGAGCAGGTCCAATCAAAAGCATACTGTCCCTAAATGTGCCTTAATGATCTATATTTATATACT 48 13429393 0.999991114 11 46 307 0.962264151 1.230448921 0.169811321 0.104166667 0.188679245 48 0 2 51 3R:13429375-13429504 6 yrt FBtr0114376|FBtr0082793|FBtr0114375|FBtr0114374 13428865|13428865|13428865|13428865 13430186|13429604|13429604|13429604 TGATCT 6mer3-8 dme-bantam-3p 3R - 13429377 13429477 3'utr yrt FlyBase G38380.1 AAGCATTCCAAGCGAGAGCAACGACAAAAAGACAATGAGAGAGCAGGTCCAATCAAAAGCATACTGTCCCTAAATGTGCCTTAATGATCTATATTTATATA 37 13429393 0.983671388 8 35 226 0.959183673 1.371067862 0.183673469 0.189189189 0.387755102 37 1 1 47 3R:13429377-13429477 6 22 3618 FBgn0004049 300.3333333 8.753333333 13.46333333 0.073251942 2.513328256 1.634067839 0 0 0 0.01 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 13429721 13429728 - 3R_13429721_13429728_- 0.631136385 0.631136385 0.631136385 0 yrt FBtr0114376 13428865 13430186 3R - 13429603 13429761 stop_codon yrt FlyBase G50776.1 GAGCAATTATCCGGACAGCAGTCGCATTCCGTTTCCGTCCAGCAGCAACAGCAAAGACATGGTATCGCCCTGGCTGGTTTCCTCGGAGGTGGTATCGGCACCCAAGGGACGCGAGTCGGCCATCATTCGAAAATCCGTTATTACAACCCAGTTGTAATT 421 13429729 0.970743294 14 415 2392 0.985263158 1.971275849 0.170526316 0.116389549 0.216842105 421 3 4 468 3R:13429603-13429761 8 yrt FBtr0114376 13428865 13430186 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R - 13429659 13429767 3'utr yrt FlyBase G38382.1 AACTCCGAGCAATTATCCGGACAGCAGTCGCATTCCGTTTCCGTCCAGCAGCAACAGCAAAGACATGGTATCGCCCTGGCTGGTTTCCTCGGAGGTGGTATCGGCACCC 252 13429729 0.987630833 10 251 1384 0.997409326 2.284430734 0.170984456 0.396825397 0.606217617 252 0 1 385 3R:13429659-13429767 8 326 3619 FBgn0004049 300.3333333 8.753333333 13.46333333 1.085460599 37.24295506 24.21391434 1 1 1 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 3R 13635508 13635513 - 3R_13635508_13635513_- 1 1 1 0 sqd FBtr0309094|FBtr0082856 13634860|13635190 13636454|13636454 3R - 13635464 13635531 3'utr sqd FlyBase G50791.1 AAACAAAAGAAGCAAGCATTGACTGGCTGGCACATCGGGTTGCCTTCTTCCCGTTCGATTGAGAAAAA 39 13635513 0.922067006 6 39 135 1 1.740362689 0.2 0.333333333 0.527272727 39 0 0 55 3R:13635464-13635531 6 sqd FBtr0309094|FBtr0082856 13634860|13635190 13636454|13636454 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 13635425 13635525 3'utr sqd FlyBase G38392.1 AAGAAGCAAGCATTGACTGGCTGGCACATCGGGTTGCCTTCTTCCCGTTCGATTGAGAAAAACTATATACGATATTCGATATACGATATACGACAAGACAC 23 13635512 0.951880423 9 23 102 1 1.544068044 0 0.347826087 0.571428571 23 0 0 35 3R:13635425-13635525 6 26 3620 FBgn0263396 13095.56667 400.09 616.6433333 0.001985405 0.064985378 0.042163758 0 -1 -0.5 0.01 dme-miR-14-3p 6mer2-7 AGACTG 3R 13636184 13636189 - 3R_13636184_13636189_- 1 1 1 0 sqd FBtr0309094|FBtr0082856|FBtr0082857|FBtr0082855 13634860|13635190|13636041|13635697 13636454|13636454|13636454|13636454 3R - 13636161 13636212 3'utr sqd FlyBase G50795.2 AATGAGGAAAAAAGGAAATGAATAGACTGGCTGGCTGGGAGCAATAATATCA 378 13636190 0.83408203 6 368 1431 0.976798144 2.022222105 0.269141531 0.12962963 0.236658933 378 7 3 421 3R:13636161-13636212 6 sqd FBtr0082855|FBtr0082857|FBtr0309094|FBtr0082856 13635697|13636041|13634860|13635190 13636454|13636454|13636454|13636454 AGACTG 6mer2-7 dme-miR-14-3p 3R - 13636139 13636222 3'utr sqd FlyBase G38394.1 GTATGAAAGAAATGAGGAAAAAAGGAAATGAATAGACTGGCTGGCTGGGAGCAATAATATCAACATCAGCAACCTTAACACACC 222 13636190 0.938006933 6 214 831 0.973941368 2.475671188 0.25732899 0.306306306 0.498371336 222 8 0 299 3R:13636139-13636222 6 296.5 3621 FBgn0263396 13095.56667 400.09 616.6433333 0.02264125 0.741083256 0.480829004 1 1 1 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 3R 13639898 13639903 - 3R_13639898_13639903_- 0.9998798 0.999938531 0.999909165 4.15E-05 sqd FBtr0082854 13637716 13642188 3R - 13639792 13639926 3'utr sqd FlyBase G50804.1 TGTTGTCAATGTGCGTCGACAATTTGACTGTATACCAATTATATATACATTTGTACATTTACATACACCTTTAATCATAAACTTTGAGTAAATTGTTTTACAAAGAAATTGCATGTTTCTCAATGTTTTTAGCAA 22 13639896 0.984377038 13 22 174 1 1.462397998 0.275862069 0.227272727 0.413793103 22 0 0 29 3R:13639792-13639926 6 sqd FBtr0082854 13637716 13642188 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 13639881 13639923 3'utr sqd FlyBase G38403.1 TGTCAATGTGCGTCGACAATTTGACTGTATACCAATTATATAT 20 13639902 0.962089656 5 17 137 0.928571429 1.414973348 0.428571429 0.4 0.571428571 20 2 0 26 3R:13639881-13639923 6 15.5 3622 FBgn0263396 13095.56667 400.09 616.6433333 0.001183607 0.038741283 0.025136086 -7 -1 -4 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 3R 13640404 13640410 - 3R_13640404_13640410_- 0.620204266 0.620204266 0.620204266 0 sqd FBtr0082854 13637716 13642188 3R - 13640378 13640472 3'utr sqd FlyBase G50806.1 ACCACTGCTGCAGCACCCCCCCGCAGCCTCATTCGTTAGATCGTTCTTTTATTTGCTTTATTTGCATTTCCGCTGCACTTTCTTGACCAAAACGT 26 13640411 0.930024362 10 25 268 0.939393939 1.491361694 0.303030303 0.230769231 0.393939394 26 2 0 31 3R:13640378-13640472 7 sqd FBtr0082854 13637716 13642188 TGCATTT 7mer-m8 dme-miR-277-3p 3R - 13640393 13640430 3'utr sqd FlyBase G38407.1 GTTCTTTTATTTGCTTTATTTGCATTTCCGCTGCACTT 7 13640412 0.646496213 5 7 88 1 1 0.6 0.428571429 0.6 7 0 0 10 3R:13640393-13640430 7 12.5 3623 FBgn0263396 13095.56667 400.09 616.6433333 0.000954522 0.03124297 0.020271037 1 2 1.5 0.01 dme-miR-33-5p 7mer-m8 CAATGCA 3R 13640735 13640741 - 3R_13640735_13640741_- 0.674513988 0.664854542 0.669684265 0.006830298 sqd FBtr0082854 13637716 13642188 3R - 13640728 13640779 3'utr sqd FlyBase G50809.1 TTATTATTCCGGCAACGGGATAATATTCACGTTCTTTGCAATGCATATGTTT 7 13640734 0.892321635 5 6 64 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 3R:13640728-13640779 7 sqd FBtr0082854 13637716 13642188 CAATGCA 7mer-m8 dme-miR-33-5p 3R - 13640720 13640752 3'utr sqd FlyBase G38410.1 CACGTTCTTTGCAATGCATATGTTTTCGTATGC 8 13640745 0.686614291 6 7 63 0.833333333 1 0 0.5 0.666666667 8 2 0 10 3R:13640720-13640752 7 6 3624 FBgn0263396 13095.56667 400.09 616.6433333 0.00045817 0.014996626 0.009730098 -7 4 -1.5 0.01 dme-miR-79-3p 6mer2-7 AGCTTT 3R 13640847 13640852 - 3R_13640847_13640852_- 0.999999999 0.999999999 0.999999999 0 sqd FBtr0082854 13637716 13642188 3R - 13640785 13640869 3'utr sqd FlyBase G50810.1 ACGAAACGCGTAATCAAAGCTTTGATTCAATGTCTATTTAAATATATATATACCTTATATATAGCATATAAATATATTTTTAGAT 22 13640844 0.982584461 9 21 164 0.964285714 1.130333768 0.714285714 0.272727273 0.428571429 22 0 1 27 3R:13640785-13640869 6 sqd FBtr0082854 13637716 13642188 AGCTTT 6mer2-7 dme-miR-79-3p 3R - 13640780 13640862 3'utr sqd FlyBase G38411.1 GCGTAATCAAAGCTTTGATTCAATGTCTATTTAAATATATATATACCTTATATATAGCATATAAATATATTTTTAGATACATA 13 13640844 0.980723928 8 13 98 1 1.342422681 0.636363636 0.384615385 0.636363636 13 0 0 22 3R:13640780-13640862 6 13.5 3625 FBgn0263396 13095.56667 400.09 616.6433333 0.001030883 0.033742408 0.02189272 -8 -8 -8 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 13641265 13641271 - 3R_13641265_13641271_- 0.823349562 0.823349562 0.823349562 0 sqd FBtr0082854 13637716 13642188 3R - 13641254 13641294 3'utr sqd FlyBase G50812.1 CTTGGTTGCCTTCAACAGACTTTCCAAAGATGACAAATACC 14 13641273 0.673489021 4 14 59 1 1.278753601 0.052631579 0.214285714 0.421052632 14 0 0 19 3R:13641254-13641294 7 sqd FBtr0082854 13637716 13642188 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 13641247 13641285 3'utr sqd FlyBase G38414.1 CTTCAACAGACTTTCCAAAGATGACAAATACCTCAAACG 8 13641273 0.912057784 3 8 26 1 1.204119983 0.1875 0.375 0.6875 8 0 0 16 3R:13641247-13641285 7 10.5 3626 FBgn0263396 13095.56667 400.09 616.6433333 0.000801798 0.026244095 0.017027671 2 2 2 0.01 dme-miR-2a-2-5p 7mer-A1 GATGAGA 3R 13641419 13641425 - 3R_13641419_13641425_- 0.782911824 0.782911824 0.782911824 0 sqd FBtr0082854 13637716 13642188 3R - 13641351 13641459 3'utr sqd FlyBase G50813.1 AAAAAGATGTGTTGTTAATAGAGTGAGAAGGAGCGATGAGAAAAGTAGACGTGACGTTCAAGTCGAGGCATATATAATGCTACCATCCTGCCATTTATATGCGACCACC 50 13641414 0.92254248 10 45 215 0.903225806 1.447158031 0.193548387 0.2 0.35483871 50 5 1 56 3R:13641351-13641459 7 sqd FBtr0082854 13637716 13642188 GATGAGA 7mer-A1 dme-miR-2a-2-5p 3R - 13641350 13641443 3'utr sqd FlyBase G38415.1 AATAGAGTGAGAAGGAGCGATGAGAAAAGTAGACGTGACGTTCAAGTCGAGGCATATATAATGCTACCATCCTGCCATTTATATGCGACCACCA 28 13641414 0.919969801 11 25 123 0.904761905 1.579783597 0.214285714 0.357142857 0.571428571 28 4 0 38 3R:13641350-13641443 7 22 3627 FBgn0263396 13095.56667 400.09 616.6433333 0.001679958 0.054987628 0.035677026 -11 -11 -11 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 13641551 13641556 - 3R_13641551_13641556_- 1 1 1 0 sqd FBtr0082854 13637716 13642188 3R - 13641530 13641601 3'utr sqd FlyBase G50815.1 CGTATAATTTTAAAGGCATATAATTGATGTTTAAAATTTTAAAGCGTACCTTTTAAACGAGAATTCATTTAA 18 13641549 0.988309901 10 18 162 1 1.278753601 0.157894737 0.055555556 0.105263158 18 0 0 19 3R:13641530-13641601 6 sqd FBtr0082854 13637716 13642188 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 13641528 13641575 3'utr sqd FlyBase G38417.1 ATGTTTAAAATTTTAAAGCGTACCTTTTAAACGAGAATTCATTTAAAC 15 13641549 0.985735769 5 13 116 0.958333333 1.361727836 0 0.466666667 0.666666667 15 1 0 23 3R:13641528-13641575 6 14 3628 FBgn0263396 13095.56667 400.09 616.6433333 0.001069064 0.034992127 0.022703562 -7 -7 -7 0.01 dme-miR-190-5p 6mer3-8 ACATAT 3R 13641738 13641743 - 3R_13641738_13641743_- 1 1 1 0 sqd FBtr0082854 13637716 13642188 3R - 13641739 13641806 3'utr sqd FlyBase G50816.1 AAGAAAACTTTTAAAAATTGTAGATTTGAAAGAGAGAAAACAAGAAACATTTCTTTAATGCTAACATA 23 13641755 0.756252367 10 23 147 1 1.447158031 0.035714286 0.173913043 0.321428571 23 0 0 28 3R:13641739-13641806 4 sqd FBtr0082854 13637716 13642188 ACATAT 6mer3-8 dme-miR-190-5p 3R - 13641722 13641806 3'utr sqd FlyBase G38418.1 AAGAAAACTTTTAAAAATTGTAGATTTGAAAGAGAGAAAACAAGAAACATTTCTTTAATGCTAACATATAAATTTTAATCTAATC 15 13641756 0.972085511 9 15 91 1 1.380211242 0.125 0.4 0.625 15 0 0 24 3R:13641722-13641806 6 3 3629 FBgn0263396 13095.56667 400.09 616.6433333 0.000229085 0.007498313 0.004865049 12 13 12.5 0.01 dme-miR-277-3p 6mer3-8 TGCATT 3R 13641919 13641924 - 3R_13641919_13641924_- 0.937125288 1 0.968562644 0.044459127 sqd FBtr0082854 13637716 13642188 3R - 13641873 13641938 3'utr sqd FlyBase G50817.1 GCTTATATACCGCATGCATTGTCTATATGCATATTTGCATATAAATCATGTTGGTATATGATGTCA 7 13641905 0.993129514 6 7 64 1 0.84509804 0.142857143 0 0 7 0 0 7 3R:13641873-13641938 6 sqd FBtr0082854 13637716 13642188 TGCATT 6mer3-8 dme-miR-277-3p 3R - 13641881 13641939 3'utr sqd FlyBase G38419.1 TGCTTATATACCGCATGCATTGTCTATATGCATATTTGCATATAAATCATGTTGGTATA 7 13641922 0.991829055 6 6 58 0.846153846 1.041392685 0 0.428571429 0.692307692 7 2 0 11 3R:13641881-13641939 6 4.5 3630 FBgn0263396 13095.56667 400.09 616.6433333 0.000343628 0.011247469 0.007297573 -19 -2 -10.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 13642064 13642069 - 3R_13642064_13642069_- 1 0.9999788 0.9999894 1.50E-05 sqd FBtr0082854 13637716 13642188 3R - 13642050 13642120 3'utr sqd FlyBase G50818.1 AAACAACAACAACCGCAGAATATAAAAACCTTCTAATTTTTGCCATAGACCTGATCTGATCCAAAATTTCC 16 13642069 0.97934253 8 15 105 1 1.278753601 0.052631579 0.266666667 0.421052632 15 0 0 19 3R:13642050-13642120 6 sqd FBtr0082854 13637716 13642188 TGATCT 6mer3-8 dme-bantam-3p 3R - 13642053 13642086 3'utr sqd FlyBase G38420.1 AATTTTTGCCATAGACCTGATCTGATCCAAAATT 9 13642066 0.618280974 6 9 57 1 1.255272505 0 0.555555556 0.777777778 9 0 0 18 3R:13642053-13642086 6 10.5 3631 FBgn0263396 13095.56667 400.09 616.6433333 0.000801798 0.026244095 0.017027671 0 -3 -1.5 0.01 dme-miR-7-5p 7mer-A1 TCTTCCA 3R 13651681 13651687 + 3R_13651681_13651687_+ 0.823349562 0.823349562 0.823349562 0 rin FBtr0346347|FBtr0082797|FBtr0082799|FBtr0346346 13651565|13651565|13651565|13651565 13654527|13652413|13652413|13652413 3R + 13651596 13651734 3'utr rin FlyBase G42600.1 AAAGCATCAACAAATGAGCAACGGCAGCAGTAGCGACTATAACATCAAGAACAGCAGCAACAACCCAACGTTAAAAACATCGACTTCTTCCACAATGCAATCAATCAATTACATTCAAGAACATCTCATGCAATTAAAC 68 13651683 0.952372698 13 64 291 0.951219512 1.591064607 0.036585366 0.191176471 0.329268293 68 3 1 78 3R:13651596-13651734 7 rin FBtr0082799|FBtr0346346|FBtr0346347|FBtr0082797 13651565|13651565|13651565|13651565 13652413|13652413|13654527|13652413 TCTTCCA 7mer-A1 dme-miR-7-5p 3R + 13651642 13651772 3'utr rin FlyBase G32182.2 AAGAACAGCAGCAACAACCCAACGTTAAAAACATCGACTTCTTCCACAATGCAATCAATCAATTACATTCAAGAACATCTCATGCAATTAAACACACGCAAATCACACACTCATACACTAAGATAAAGTAG 40 13651683 0.956057617 15 37 191 0.933333333 1.748188027 0.066666667 0.325 0.55 40 4 0 56 3R:13651642-13651772 7 24 3632 FBgn0015778 4641.9 120.1133333 185.17 0.005170297 0.199811289 0.129610628 -2 -2 -2 0.01 dme-miR-92b-3p 7mer-m1 TGCAATT 3R 13651724 13651730 + 3R_13651724_13651730_+ 0.765586663 0.765586663 0.765586663 0 rin FBtr0346347|FBtr0082797|FBtr0082799|FBtr0346346 13651565|13651565|13651565|13651565 13654527|13652413|13652413|13652413 3R + 13651596 13651734 3'utr rin FlyBase G42600.1 AAAGCATCAACAAATGAGCAACGGCAGCAGTAGCGACTATAACATCAAGAACAGCAGCAACAACCCAACGTTAAAAACATCGACTTCTTCCACAATGCAATCAATCAATTACATTCAAGAACATCTCATGCAATTAAAC 68 13651724 0.952372698 13 64 291 0.951219512 1.591064607 0.036585366 0.191176471 0.329268293 68 3 1 78 3R:13651596-13651734 7 rin FBtr0082799|FBtr0346346|FBtr0346347|FBtr0082797 13651565|13651565|13651565|13651565 13652413|13652413|13654527|13652413 TGCAATT 7mer-m1 dme-miR-92b-3p 3R + 13651642 13651772 3'utr rin FlyBase G32182.2 AAGAACAGCAGCAACAACCCAACGTTAAAAACATCGACTTCTTCCACAATGCAATCAATCAATTACATTCAAGAACATCTCATGCAATTAAACACACGCAAATCACACACTCATACACTAAGATAAAGTAG 40 13651724 0.956057617 15 37 191 0.933333333 1.748188027 0.066666667 0.325 0.55 40 4 0 56 3R:13651642-13651772 7 15 3633 FBgn0015778 4641.9 120.1133333 185.17 0.003231435 0.124882056 0.081006643 0 0 0 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT 3R 13651808 13651813 + 3R_13651808_13651813_+ 1 1 1 0 rin FBtr0346347|FBtr0082797|FBtr0082799|FBtr0346346 13651565|13651565|13651565|13651565 13654527|13652413|13652413|13652413 3R + 13651785 13651825 3'utr rin FlyBase G42601.1 AAAACGTCAACTGTCCTTTAAATGTTCCTGAGCGCAACTCT 17 13651806 0.685274808 4 14 127 0.80952381 1.230448921 0.19047619 0.235294118 0.380952381 17 4 0 17 3R:13651785-13651825 6 rin FBtr0082799|FBtr0346346|FBtr0346347|FBtr0082797 13651565|13651565|13651565|13651565 13652413|13652413|13654527|13652413 GTTCCT 6mer2-7 dme-miR-276a-3p 3R + 13651785 13651825 3'utr rin FlyBase G32183.1 AAAACGTCAACTGTCCTTTAAATGTTCCTGAGCGCAACTCT 21 13651806 0.728463717 4 18 142 0.806451613 0.795880017 0.193548387 0.380952381 0.580645161 21 3 3 25 3R:13651785-13651825 6 14.5 3634 FBgn0015778 4641.9 120.1133333 185.17 0.003123721 0.120719321 0.078306421 2 2 2 0.01 dme-miR-278-3p 6mer3-8 CCCACC 3R 13652042 13652047 + 3R_13652042_13652047_+ 1 1 1 0 rin FBtr0346347|FBtr0082797|FBtr0082799|FBtr0346346 13651565|13651565|13651565|13651565 13654527|13652413|13652413|13652413 3R + 13652009 13652106 3'utr rin FlyBase G42604.1 AAGCTTCAGCTCGGCAACTGCTACTCTCTACCACCCACCACCCACTCACGGAATCAACTTCACCTTGAAACACGTGTATTAAATTTAAGTCTCAACCA 41 13652019 0.899258479 12 37 193 0.921568627 1.371067862 0.039215686 0.170731707 0.333333333 41 3 1 47 3R:13652009-13652106 6 rin FBtr0082799|FBtr0346346|FBtr0346347|FBtr0082797 13651565|13651565|13651565|13651565 13652413|13652413|13654527|13652413 CCCACC 6mer3-8 dme-miR-278-3p 3R + 13652001 13652055 3'utr rin FlyBase G32185.1 AAGAATGTAAGCTTCAGCTCGGCAACTGCTACTCTCTACCACCCACCACCCACTC 19 13652019 0.925110455 5 17 83 0.9 1.431363764 0 0.473684211 0.666666667 19 3 0 27 3R:13652001-13652055 6 9.5 3635 FBgn0015778 4641.9 120.1133333 185.17 0.002046576 0.079091969 0.051304207 23 23 23 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3R 13652792 13652797 + 3R_13652792_13652797_+ 1 1 1 0 rin FBtr0346347 13651565 13654527 3R + 13652756 13652832 3'utr rin FlyBase G42608.1 AAACCTTTTGCTACTTAAATCTAATTTGCAGACTAGCTAGTCTATATAGGTATCGTATCGGTTCGAAACGGTTCGGT 10 13652799 0.985772016 6 9 77 1 1.041392685 0.181818182 0.1 0.181818182 10 0 0 11 3R:13652756-13652832 6 rin FBtr0346347 13651565 13654527 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3R + 13652736 13652819 3'utr rin FlyBase G32190.1 CGCCGCATTTTAGAGCCTGTAAACCTTTTGCTACTTAAATCTAATTTGCAGACTAGCTAGTCTATATAGGTATCGTATCGGTTC 8 13652764 0.982417017 7 7 60 1 0.954242509 0.111111111 0.125 0.222222222 8 0 0 9 3R:13652736-13652819 6 4.5 3636 FBgn0015778 4641.9 120.1133333 185.17 0.000969431 0.037464617 0.024301993 -7 28 10.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 13653020 13653025 + 3R_13653020_13653025_+ 1 1 1 0 rin FBtr0346347 13651565 13654527 3R + 13652990 13653036 3'utr rin FlyBase G42610.1 TCGTTCTGTGTAATAAGTTCAAGGTCGTAAACCAAACTAAGTCAAGC 7 13653003 0.788770709 2 6 43 0.888888889 0.903089987 0 0.142857143 0.333333333 7 1 0 8 3R:13652990-13653036 6 rin FBtr0346347 13651565 13654527 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 13652992 13653087 3'utr rin FlyBase G32191.1 GTTCTGTGTAATAAGTTCAAGGTCGTAAACCAAACTAAGTCAAGCAACTTAAACGATTTGGTGTTTCCAACGCAGTTGTGAACTAAAATTTAGTAC 13 13653017 0.962645126 8 12 68 0.954545455 1.322219295 0.181818182 0.461538462 0.681818182 13 1 0 21 3R:13652992-13653087 6 6.5 3637 FBgn0015778 4641.9 120.1133333 185.17 0.001400289 0.054115558 0.035102878 17 3 10 0.01 dme-miR-999-3p 6mer2-7 GTTAAC 3R 13653308 13653313 + 3R_13653308_13653313_+ 1 1 1 0 rin FBtr0346347 13651565 13654527 3R + 13653284 13653351 3'utr rin FlyBase G42611.1 AAACAAAAACTCATATAATTTAATGTTAACTTTTAGACTTACCAGAAATCTAAATATACATAAATATA 12 13653316 0.985549904 5 12 97 1 1.176091259 0.133333333 0.166666667 0.333333333 12 0 0 15 3R:13653284-13653351 6 rin FBtr0346347 13651565 13654527 GTTAAC 6mer2-7 dme-miR-999-3p 3R + 13653305 13653331 3'utr rin FlyBase G32192.1 AATGTTAACTTTTAGACTTACCAGAAA 6 13653317 0.697293352 2 5 44 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3R:13653305-13653331 6 8 3638 FBgn0015778 4641.9 120.1133333 185.17 0.001723432 0.066603763 0.043203543 -8 -9 -8.5 0.01 dme-miR-995-5p 6mer3-8 AATTCG 3R 13657907 13657912 - 3R_13657907_13657912_- 1 1 1 0 Hrb87F FBtr0300590|FBtr0082851|FBtr0334495 13657793|13657322|13656844 13658466|13658466|13658466 3R - 13657853 13657941 3'utr Hrb87F FlyBase G50834.1 GCTGCTATCTCTCTTTTGTAACCATTAATAATTCGCTGATCGATTTATGTTTAGGGTCCTAAGAACCCCGAACGCTTAGTTTTAACCAT 29 13657897 0.989395087 13 27 255 0.931034483 1.431363764 0.172413793 0 0 29 2 0 27 3R:13657853-13657941 6 Hrb87F FBtr0334495|FBtr0300590|FBtr0082851 13656844|13657793|13657322 13658466|13658466|13658466 AATTCG 6mer3-8 dme-miR-995-5p 3R - 13657883 13657915 3'utr Hrb87F FlyBase G38431.2 AATAATTCGCTGATCGATTTATGTTTAGGGTCC 7 13657895 0.649953509 4 6 59 0.916666667 1.041392685 0 0.428571429 0.666666667 7 1 0 11 3R:13657883-13657915 6 11.5 3639 FBgn0004237 959.7066667 53.14666667 81.73 0.011982828 0.216382338 0.140707207 -15 -17 -16 0.01 dme-miR-304-5p 6mer2-7 GAGATT 3R 13663476 13663481 + 3R_13663476_13663481_+ 1 1 1 0 B52 FBtr0300588|FBtr0082804 13663107|13663107 13666891|13666891 3R + 13663458 13663505 stop_codon B52 FlyBase G42618.1 TTGATGTGCTTTGACTGAGAGATTCCCTCCTCGGCTTGGGGCCGAATC 16 13663480 0.813463016 3 14 103 0.913043478 1.322219295 0 0.375 0.565217391 16 2 0 21 3R:13663458-13663505 6 B52 FBtr0082804|FBtr0300588 13663107|13663107 13666891|13666891 GAGATT 6mer2-7 dme-miR-304-5p 3R + 13663453 13663505 stop_codon B52 FlyBase G32198.1 AGAGTTTGATGTGCTTTGACTGAGAGATTCCCTCCTCGGCTTGGGGCCGAATC 11 13663480 0.97292806 3 11 70 1 1.230448921 0.352941176 0.363636364 0.588235294 11 0 0 17 3R:13663453-13663505 6 13 3640 FBgn0004587 2711.693333 191.7166667 292.1666667 0.004794052 0.067808398 0.044495151 -4 -4 -4 0.01 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 13663539 13663545 + 3R_13663539_13663545_+ 0.823349562 0.823349562 0.823349562 0 B52 FBtr0300588|FBtr0082804|FBtr0300586|FBtr0082803 13663107|13663107|13663474|13663474 13666891|13666891|13666891|13666891 3R + 13663518 13663557 5'utr B52 FlyBase G42619.1 AGAATCAAATCTAATTGAATCGCTGTGAGAAAGACAAGCT 7 13663535 0.964573348 3 6 31 0.857142857 0.77815125 0 0 0 7 1 0 6 3R:13663518-13663557 7 B52 FBtr0082803|FBtr0300586|FBtr0082804|FBtr0300588 13663474|13663474|13663107|13663107 13666891|13666891|13666891|13666891 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R + 13663513 13663584 5'utr B52 FlyBase G32199.1 GAAAGAGAATCAAATCTAATTGAATCGCTGTGAGAAAGACAAGCTAGTCTAGTGACCGACCGACCGGTTCAG 8 13663534 0.945741218 4 7 35 0.923076923 0.77815125 0.307692308 0.25 0.538461538 8 0 1 12 3R:13663513-13663584 7 5.5 3641 FBgn0004587 2711.693333 191.7166667 292.1666667 0.002028253 0.028688168 0.018824872 4 5 4.5 0.01 dme-miR-2b-2-5p 6mer2-7 TGAAGA 3R 13665619 13665624 + 3R_13665619_13665624_+ 1 1 1 0 B52 FBtr0300588|FBtr0082804|FBtr0300586|FBtr0082803 13663107|13663107|13663474|13663474 13666891|13666891|13666891|13666891 3R + 13665596 13665654 3'utr B52 FlyBase G42623.1 TGAGTTCGCCTCGTTGTCGGACATGAAGACGGCCATTGAGAAGTTGGATGACACCGAGC 13 13665640 0.671358851 7 13 52 1 1.204119983 0.375 0.230769231 0.375 13 0 0 16 3R:13665596-13665654 6 B52 FBtr0082803|FBtr0300586|FBtr0082804|FBtr0300588 13663474|13663474|13663107|13663107 13666891|13666891|13666891|13666891 TGAAGA 6mer2-7 dme-miR-2b-2-5p 3R + 13665597 13665656 3'utr B52 FlyBase G32202.1 GAGTTCGCCTCGTTGTCGGACATGAAGACGGCCATTGAGAAGTTGGATGACACCGAGCTA 13 13665640 0.942530695 5 12 51 0.9 1.255272505 0.4 0.461538462 0.65 13 2 0 18 3R:13665597-13665656 6 4.5 3642 FBgn0004587 2711.693333 191.7166667 292.1666667 0.00165948 0.023472138 0.015402168 -21 -21 -21 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3R 13675253 13675259 - 3R_13675253_13675259_- 0.521223853 0.521223855 0.521223854 0 CG9588 FBtr0082849 13675090 13675502 3R - 13675114 13675292 3'utr CG9588 FlyBase G50842.1 AAGGTGCACAGGTGACAGGCAAAAGGATGATATTGTGATTCGGTGGATTCTGTCGACATGACCGATTTTTTTTGCATTTAATTTTCATTCAATATGAAATGATGCGTAACAAAATGATGAGGCGGTTTTACTAACAAATAAGTTTTTATAGCGCTTTTACTGGTAAATAAAGAAGGATA 169 13675260 0.902794834 20 160 1327 0.940594059 1.433655561 0.361386139 0.159763314 0.297029703 169 6 6 190 3R:13675114-13675292 7 CG9588 FBtr0082849 13675090 13675502 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 13675208 13675276 3'utr CG9588 FlyBase G38439.1 AGGCAAAAGGATGATATTGTGATTCGGTGGATTCTGTCGACATGACCGATTTTTTTTGCATTTAATTTT 115 13675260 0.692813686 10 108 891 0.941176471 1.505149978 0.294117647 0.365217391 0.570588235 115 6 4 160 3R:13675208-13675276 7 111 3643 FBgn0038166 196.9933333 19.93666667 30.61666667 0.563470845 5.567630831 3.62547632 1 1 1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 13692361 13692366 + 3R_13692361_13692366_+ 1 1 1 0 flfl FBtr0114604|FBtr0114604|FBtr0114604 13691732|13691732|13691732 13693905|13693905|13693905 3R + 13692346 13692424 3'utr flfl FlyBase G42665.1 ATGAGTTAACAGATCCTGTGAAGTTGGCTGCTGGCCCAGAATGTTTGTGCAATACTTTCGTGTCGATATTTAAATAACA 11 13692370 0.983799174 5 10 89 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 3R:13692346-13692424 6 flfl FBtr0114604|FBtr0114604|FBtr0114604 13691732|13691732|13691732 13693905|13693905|13693905 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 13692328 13692405 3'utr flfl FlyBase G32232.1 TCTATCGTATGAGATCGTATGAGTTAACAGATCCTGTGAAGTTGGCTGCTGGCCCAGAATGTTTGTGCAATACTTTCG 9 13692390 0.981659948 7 9 66 1 1.113943352 0.384615385 0.333333333 0.538461538 9 0 0 13 3R:13692328-13692405 6 6 3644 FBgn0024555 2089.806667 50.89333333 77.96333333 0.002871079 0.117893634 0.076959254 -9 -29 -19 0.01 dme-miR-965-3p 6mer3-8 TACGCT 3R 13693281 13693286 + 3R_13693281_13693286_+ 1 0.999912275 0.999956137 6.20E-05 flfl FBtr0114604 13691732 13693905 3R + 13693260 13693336 3'utr flfl FlyBase G42669.1 ATCCAATTCAATCCACACTCATACGCTCGCTCACACACTGAAACCAATTGACATCCCACAGCTACACTGACAGAAAG 15 13693307 0.706379395 8 15 58 1 1.204119983 0.25 0.066666667 0.125 15 0 0 16 3R:13693260-13693336 6 flfl FBtr0114604 13691732 13693905 TACGCT 6mer3-8 dme-miR-965-3p 3R + 13693206 13693330 3'utr flfl FlyBase G32236.1 ATAATATTAATTTGTATTTAACGAATGTAGTAGGGCTCACTTGGAACCAATCCAATCCAATTCAATCCACACTCATACGCTCGCTCACACACTGAAACCAATTGACATCCCACAGCTACACTGAC 19 13693307 0.914742446 9 19 100 1 1.414973348 0.192307692 0.315789474 0.5 19 0 0 26 3R:13693206-13693330 6 5 3645 FBgn0024555 2089.806667 50.89333333 77.96333333 0.002392566 0.098244695 0.064132712 -26 -26 -26 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 3R 13693370 13693375 + 3R_13693370_13693375_+ 0.999999999 0.999999966 0.999999982 0 flfl FBtr0114604 13691732 13693905 3R + 13693355 13693445 3'utr flfl FlyBase G42670.1 ATAATCGTATTTGCCATGTGCGTTGCGTACTGTACTACATTTATTTATTTTAGTGTTTAAAGAACTTGTCACTGCAAACGGTTTCCCCCGA 273 13693385 0.850108299 15 264 2902 0.971518987 2.010017121 0.053797468 0.131868132 0.25 273 7 2 307 3R:13693355-13693445 6 flfl FBtr0114604 13691732 13693905 ATGTGC 6mer3-8 dme-miR-305-3p 3R + 13693339 13693453 3'utr flfl FlyBase G32237.1 ATAAAGTTATTTGTTAATAATCGTATTTGCCATGTGCGTTGCGTACTGTACTACATTTATTTATTTTAGTGTTTAAAGAACTTGTCACTGCAAACGGTTTCCCCCGAGCAACCGA 161 13693385 0.991769072 10 155 1698 0.97826087 2.431363764 0.050724638 0.447204969 0.677536232 161 6 0 270 3R:13693339-13693453 6 141 3646 FBgn0024555 2089.806667 50.89333333 77.96333333 0.067470356 2.770500393 1.808542477 -15 -15 -15 0.01 dme-miR-283-5p 6mer3-8 TGATAT 3R 13693724 13693729 + 3R_13693724_13693729_+ 1 1 1 0 flfl FBtr0114604 13691732 13693905 3R + 13693671 13693771 3'utr flfl FlyBase G42672.1 AGCGACAACACTATAGTTTATACATAGTATTTATATGAATCGTGTATTGTATATGATATGCTGTCTAATCCCTAATCCTAACACATACCCATTACGTCTAT 15 13693729 0.987087292 8 15 133 1 1.204119983 0.0625 0.066666667 0.125 15 0 0 16 3R:13693671-13693771 6 flfl FBtr0114604 13691732 13693905 TGATAT 6mer3-8 dme-miR-283-5p 3R + 13693706 13693773 3'utr flfl FlyBase G32239.1 TGAATCGTGTATTGTATATGATATGCTGTCTAATCCCTAATCCTAACACATACCCATTACGTCTATAA 16 13693728 0.84123054 8 13 133 0.92 1.361727836 0.08 0.4375 0.64 16 2 0 23 3R:13693706-13693773 6 11 3647 FBgn0024555 2089.806667 50.89333333 77.96333333 0.005263645 0.216138329 0.141091966 -5 -4 -4.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3R 13695333 13695338 - 3R_13695333_13695338_- 1 1 1 0 f-cup FBtr0334528|FBtr0112938|FBtr0334526|FBtr0112937|FBtr0082846|FBtr0334527|FBtr0112939|FBtr0334529|FBtr0082847 13695261|13695261|13695261|13695261|13695261|13695261|13695261|13695261|13695261 13696283|13696440|13695536|13696437|13695536|13695536|13695536|13696437|13695536 3R - 13695321 13695362 3'utr f-cup FlyBase G50860.1 CACACCGTGCATCAACCAACCAAACTAGTCTGCATGCCACAA 15 13695333 0.664924715 3 15 45 1 1.397940009 0 0.466666667 0.68 15 0 0 25 3R:13695321-13695362 6 f-cup FBtr0082847|FBtr0334529|FBtr0112939|FBtr0334527|FBtr0082846|FBtr0112937|FBtr0334526|FBtr0112938|FBtr0334528 13695261|13695261|13695261|13695261|13695261|13695261|13695261|13695261|13695261 13695536|13696437|13695536|13695536|13695536|13696437|13695536|13696440|13696283 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3R - 13695288 13695349 3'utr f-cup FlyBase G38451.1 AACCAACCAAACTAGTCTGCATGCCACAATACCTAATGCACGTTGTTAATCCTGGCTGAGTA 7 13695332 0.937317986 4 7 31 1 1.146128036 0 0.428571429 0.714285714 7 0 0 14 3R:13695288-13695349 6 10 3648 FBgn0028487 197.9333333 9.903333333 15.26 0.050522061 1.009761023 0.655307995 -5 -6 -5.5 0.01 dme-miR-184-3p 7mer-m8 TCCGTCC 3R 13838462 13838468 - 3R_13838462_13838468_- 0.661615243 0.661615243 0.661615243 0 CG31495 FBtr0082882|FBtr0344765 13838238|13838433 13838773|13838773 3R - 13838435 13838479 3'utr CG31495 FlyBase G50877.1 ACGGAGAGCATTCCGTCCTCCAGGAGTTCGGTGACCGGTGGGCCC 16 13838469 0.957978414 3 15 79 0.947368421 1.255272505 0.157894737 0.1875 0.315789474 16 1 0 18 3R:13838435-13838479 7 CG31495 FBtr0344765|FBtr0082882 13838433|13838238 13838773|13838773 TCCGTCC 7mer-m8 dme-miR-184-3p 3R - 13838446 13838479 3'utr CG31495 FlyBase G38461.1 ACGGAGAGCATTCCGTCCTCCAGGAGTTCGGTGA 11 13838469 0.934862986 2 11 57 1 1.176091259 0.4 0.272727273 0.466666667 11 0 0 15 3R:13838446-13838479 7 13 3649 FBgn0051495 85.87 7.076666667 10.89333333 0.151391639 1.837023081 1.193390453 1 1 1 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3R 13838559 13838565 - 3R_13838559_13838565_- 0.443131018 0.443131018 0.443131018 0 CG31495 FBtr0082882|FBtr0344765 13838238|13838433 13838773|13838773 3R - 13838545 13838582 3'utr CG31495 FlyBase G50878.1 AATGAACAGCCCGATAATGTGATTGCAAAGATACTAGA 12 13838559 0.70531292 3 11 70 0.916666667 1.041392685 0.166666667 0 0 12 1 0 11 3R:13838545-13838582 7 CG31495 FBtr0344765|FBtr0082882 13838433|13838238 13838773|13838773 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 13838545 13838581 3'utr CG31495 FlyBase G38462.1 ATGAACAGCCCGATAATGTGATTGCAAAGATACTAGA 15 13838559 0.763889428 3 14 84 0.92 1.361727836 0 0.533333333 0.72 15 2 0 23 3R:13838545-13838581 7 13.5 3650 FBgn0051495 85.87 7.076666667 10.89333333 0.157214394 1.907677814 1.239290086 -6 -6 -6 0.01 dme-miR-11-3p 7mer-m1 TGTGATG 3R 13968379 13968385 - 3R_13968379_13968385_- 0.612071121 0.612071121 0.612071121 0 rdx FBtr0334298|FBtr0301632|FBtr0301634|FBtr0100361 13967059|13967953|13967953|13967953 13969185|13969185|13969185|13969185 3R - 13968349 13968408 3'utr rdx FlyBase G50886.1 AATTACAAAGCGTACACTTTGATTGTGATGTATATTCGATGAGTATGACTAATGAGTAAC 39 13968386 0.890507163 9 36 344 0.94 1.194976603 0.24 0.256410256 0.42 39 1 2 47 3R:13968349-13968408 7 rdx FBtr0301634|FBtr0100361|FBtr0301632|FBtr0334298 13967953|13967953|13967953|13967059 13969185|13969185|13969185|13969185 TGTGATG 7mer-m1 dme-miR-11-3p 3R - 13968349 13968408 3'utr rdx FlyBase G38468.1 AATTACAAAGCGTACACTTTGATTGTGATGTATATTCGATGAGTATGACTAATGAGTAAC 27 13968386 0.987803012 10 27 264 1 1.579783597 0.157894737 0.37037037 0.552631579 27 0 0 38 3R:13968349-13968408 7 29 3651 FBgn0264493 1241.27 56.45333333 86.81 0.023363168 0.51369863 0.334062896 1 1 1 0.01 dme-miR-970-3p 7mer-A1 CTTATGA 3R 13968729 13968735 - 3R_13968729_13968735_- 0.823349562 0.823349562 0.823349562 0 rdx FBtr0334298|FBtr0301632|FBtr0301633|FBtr0301634|FBtr0100361 13967059|13967953|13968623|13967953|13967953 13969185|13969185|13969185|13969185|13969185 3R - 13968727 13968765 3'utr rdx FlyBase G50888.1 AATGTATTTTATTTGTTGATTTAATATTACCTTATGATT 6 13968753 0.973297978 5 6 73 1 0.954242509 0.111111111 0.333333333 0.555555556 6 0 0 9 3R:13968727-13968765 7 rdx FBtr0301634|FBtr0100361|FBtr0301632|FBtr0301633|FBtr0334298 13967953|13967953|13967953|13968623|13967059 13969185|13969185|13969185|13969185|13969185 CTTATGA 7mer-A1 dme-miR-970-3p 3R - 13968733 13968778 3'utr rdx FlyBase G38469.1 AAACTTGATTTTAAATGTATTTTATTTGTTGATTTAATATTACCTT 6 13968745 0.992505826 2 5 62 1 0.84509804 0 0.4 0.571428571 5 0 0 7 3R:13968733-13968778 2 1.5 3652 FBgn0264493 1241.27 56.45333333 86.81 0.00120844 0.026570619 0.017279115 18 10 14 0.01 dme-miR-33-5p 7mer-A1 AATGCAA 3R 13968850 13968856 - 3R_13968850_13968856_- 0.782911824 0.782878684 0.782895254 2.34E-05 rdx FBtr0334298|FBtr0301632|FBtr0301633|FBtr0301634|FBtr0100361 13967059|13967953|13968623|13967953|13967953 13969185|13969185|13969185|13969185|13969185 3R - 13968810 13968875 3'utr rdx FlyBase G50889.1 ATGTTAAACGCAGACAGATAATGCAAATGCAGGAGCAAAAGCATAGCGAGCCGTACCGTTTATTGT 46 13968857 0.838817188 7 45 117 0.980769231 1.707570176 0.192307692 0.108695652 0.211538462 46 1 0 51 3R:13968810-13968875 7 rdx FBtr0301634|FBtr0100361|FBtr0301632|FBtr0301633|FBtr0334298 13967953|13967953|13967953|13968623|13967059 13969185|13969185|13969185|13969185|13969185 AATGCAA 7mer-A1 dme-miR-33-5p 3R - 13968812 13968870 3'utr rdx FlyBase G38470.1 AAACGCAGACAGATAATGCAAATGCAGGAGCAAAAGCATAGCGAGCCGTACCGTTTATT 16 13968857 0.849053774 4 16 38 1 1.342422681 0.227272727 0.3125 0.5 16 0 0 22 3R:13968812-13968870 7 27.5 3653 FBgn0264493 1241.27 56.45333333 86.81 0.022154729 0.487128011 0.316783781 1 1 1 0.01 dme-miR-307a-3p 7mer-m8 GGTTGTG 3R 14034560 14034566 + 3R_14034560_14034566_+ 0.702972035 0.702972035 0.702972035 0 CG3061 FBtr0082869 14034491 14035041 3R + 14034496 14034615 3'utr CG3061 FlyBase G42701.1 AGTTAATGCTATCACACGAAAAGCTACTCCTCAAATCCACCACTATTTGAAACCTTAACTGCTGGGTTGTGTAGTTATTGCATATTTTGCTTTAGTTGTTATAAATGAATTTCATTGTCT 21 14034573 0.991038884 15 18 177 0.913043478 1.021189299 0.217391304 0.095238095 0.173913043 21 1 1 21 3R:14034496-14034615 7 CG3061 FBtr0082869 14034491 14035041 GGTTGTG 7mer-m8 dme-miR-307a-3p 3R + 14034545 14034579 3'utr CG3061 FlyBase G32265.2 AAACCTTAACTGCTGGGTTGTGTAGTTATTGCATA 5 14034564 0.530392835 3 3 41 0.8 0.903089987 0.3 0.8 0.9 5 2 0 8 3R:14034545-14034579 7 5 3654 FBgn0038195 1209.576667 74.17333333 113.5466667 0.004133678 0.067409671 0.044034758 -13 -4 -8.5 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 3R 14034777 14034782 + 3R_14034777_14034782_+ 1 1 1 0 CG3061 FBtr0082869 14034491 14035041 3R + 14034757 14034813 3'utr CG3061 FlyBase G42703.1 ATAGAAAGCAATCGGGCAATATGTGAAAGCGAAGCAAACGCAACTGCCAAAAAGTCA 23 14034776 0.753728108 3 23 58 1 1.431363764 0.148148148 0.130434783 0.259259259 23 0 0 27 3R:14034757-14034813 6 CG3061 FBtr0082869 14034491 14035041 ATGTGA 6mer3-8 dme-miR-1003-3p 3R + 14034733 14034905 3'utr CG3061 FlyBase G32267.1 CGTTTGGTAGCATTTTCATTTCGTATAGAAAGCAATCGGGCAATATGTGAAAGCGAAGCAAACGCAACTGCCAAAAAGTCATATTTACACGATTTACGAATATAAGTGGGCGGCTGAGACGAAGGACTTTGCGTTTGTTTCATTTAGCAATCGGATACATAAATTATAAACAT 32 14034776 0.999903337 13 31 154 1 1.62324929 0.238095238 0.21875 0.404761905 32 0 0 42 3R:14034733-14034905 6 15.5 3655 FBgn0038195 1209.576667 74.17333333 113.5466667 0.012814401 0.20896998 0.13650775 1 1 1 0.01 dme-miR-283-5p 6mer2-7 GATATT 3R 14034972 14034977 + 3R_14034972_14034977_+ 1 1 1 0 CG3061 FBtr0082869 14034491 14035041 3R + 14034945 14034998 3'utr CG3061 FlyBase G42705.1 AAGGACACGGAACGCATGGGCAGTGGCGATATTCTGAATAAAATTGCAAGTTAT 19 14034961 0.938306195 5 18 72 0.952380952 1.301029996 0.095238095 0.105263158 0.19047619 19 1 0 20 3R:14034945-14034998 6 CG3061 FBtr0082869 14034491 14035041 GATATT 6mer2-7 dme-miR-283-5p 3R + 14034945 14034985 3'utr CG3061 FlyBase G32268.1 AAGGACACGGAACGCATGGGCAGTGGCGATATTCTGAATAA 13 14034961 0.904170348 3 11 33 0.9 1.255272505 0.3 0.461538462 0.65 13 2 0 18 3R:14034945-14034985 6 10 3656 FBgn0038195 1209.576667 74.17333333 113.5466667 0.008267355 0.134819342 0.088069516 11 11 11 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3R 14035061 14035066 - 3R_14035061_14035066_- 1 1 1 0 CG9922 FBtr0082870|FBtr0334297 14035016|14035016 14035179|14035179 3R - 14035047 14035079 3'utr CG9922 FlyBase G50908.1 AATACAAAACAAAAAGACTTTTAAGCCCACAAA 12 14035059 0.907020138 3 12 36 1 1.146128036 0 0.166666667 0.285714286 12 0 0 14 3R:14035047-14035079 6 CG9922 FBtr0082870|FBtr0334297 14035016|14035016 14035179|14035179 AAGACT 6mer3-8 dme-miR-14-3p 3R - 14035049 14035096 3'utr CG9922 FlyBase G38484.1 ACTCTAGCGAAGAAAACAATACAAAACAAAAAGACTTTTAAGCCCACA 7 14035059 0.961062786 2 6 18 0.9 0.954242509 0 0.285714286 0.5 7 1 0 9 3R:14035049-14035096 6 8.5 3657 FBgn0038196 1010.823333 215.7 334.3833333 0.008408987 0.039406583 0.025419927 -7 -7 -7 0.01 dme-miR-965-3p 6mer3-8 TACGCT 3R 14119310 14119315 - 3R_14119310_14119315_- 1 1 1 0 Abi FBtr0112896|FBtr0337096|FBtr0082910|FBtr0337097|FBtr0307077|FBtr0307076 14119260|14119260|14119260|14119260|14119260|14119260 14120064|14120064|14120064|14120064|14120064|14120064 3R - 14119295 14119329 3'utr Abi FlyBase G50912.1 AATACAAGTACACATACGCTCTATATGGTAAAAAT 24 14119315 0.90643634 3 23 137 0.888888889 1.380211242 0 0.083333333 0.185185185 24 3 0 24 3R:14119295-14119329 6 Abi FBtr0307077|FBtr0307076|FBtr0082910|FBtr0337097|FBtr0112896|FBtr0337096 14119260|14119260|14119260|14119260|14119260|14119260 14120064|14120064|14120064|14120064|14120064|14120064 TACGCT 6mer3-8 dme-miR-965-3p 3R - 14119294 14119350 3'utr Abi FlyBase G38486.1 AGGAATCAAATTAAATTAAACAATACAAGTACACATACGCTCTATATGGTAAAAATA 16 14119315 0.95948439 5 14 73 0.928571429 1.414973348 0.071428571 0.4375 0.678571429 16 2 0 26 3R:14119294-14119350 6 19 3658 FBgn0020510 1356.63 69.31 106.3 0.014005293 0.274130717 0.178739417 0 0 0 0.01 dme-miR-283-5p 6mer3-8 TGATAT 3R 14119533 14119538 - 3R_14119533_14119538_- 1 1 1 0 Abi FBtr0112896|FBtr0337096|FBtr0082910|FBtr0337097|FBtr0307077|FBtr0307076 14119260|14119260|14119260|14119260|14119260|14119260 14120064|14120064|14120064|14120064|14120064|14120064 3R - 14119486 14119587 3'utr Abi FlyBase G50913.2 AAATATTTGCTCACAGTTTTATCAAGCGATTTCTGTTTGCCTTGCGCTTTGATATGCCCGGCTATTATACACCAATACTACCCGAACCTATGCCCCCAGCAA 33 14119533 0.939595014 10 30 221 0.897435897 1.06694679 0.230769231 0.181818182 0.307692308 33 2 2 35 3R:14119486-14119587 6 Abi FBtr0307077|FBtr0307076|FBtr0082910|FBtr0337097|FBtr0112896|FBtr0337096 14119260|14119260|14119260|14119260|14119260|14119260 14120064|14120064|14120064|14120064|14120064|14120064 TGATAT 6mer3-8 dme-miR-283-5p 3R - 14119458 14119556 3'utr Abi FlyBase G38487.1 TCTGTTTGCCTTGCGCTTTGATATGCCCGGCTATTATACACCAATACTACCCGAACCTATGCCCCCAGCAATACTGTAGGTTATATAAATTTCAGTTAG 11 14119533 0.988293534 7 10 89 0.933333333 1.146128036 0.2 0.363636364 0.533333333 11 1 0 14 3R:14119458-14119556 6 14 3659 FBgn0020510 1356.63 69.31 106.3 0.010319689 0.201991055 0.131702728 -5 -5 -5 0.01 dme-miR-1006-3p 6mer3-8 CGAATT 3R 14119621 14119626 - 3R_14119621_14119626_- 1 1 1 0 Abi FBtr0112896|FBtr0337096|FBtr0082910|FBtr0337097|FBtr0307077|FBtr0307076 14119260|14119260|14119260|14119260|14119260|14119260 14120064|14120064|14120064|14120064|14120064|14120064 3R - 14119588 14119716 3'utr Abi FlyBase G50914.1 GTAGCCGAAAACGATGCAAGAAGGGGAAAGTGAAACCGGATACCCGTGAATAACTTATGCGATATTATAAAACTGTTCCACAACCGTAGACGAATTCTGTCCTGCTCCTGCCGCCAATCCAAATACTTT 28 14119622 0.97150218 12 26 154 0.965517241 1.447158031 0.413793103 0.035714286 0.068965517 28 1 0 28 3R:14119588-14119716 6 Abi FBtr0307077|FBtr0307076|FBtr0082910|FBtr0337097|FBtr0112896|FBtr0337096 14119260|14119260|14119260|14119260|14119260|14119260 14120064|14120064|14120064|14120064|14120064|14120064 CGAATT 6mer3-8 dme-miR-1006-3p 3R - 14119601 14119699 3'utr Abi FlyBase G38488.1 AAGAAGGGGAAAGTGAAACCGGATACCCGTGAATAACTTATGCGATATTATAAAACTGTTCCACAACCGTAGACGAATTCTGTCCTGCTCCTGCCGCCA 26 14119622 0.964732498 11 24 150 0.897435897 1.544068044 0.41025641 0.384615385 0.58974359 26 4 0 35 3R:14119601-14119699 6 9 3660 FBgn0020510 1356.63 69.31 106.3 0.006634086 0.129851392 0.08466604 -4 -4 -4 0.01 dme-miR-2535b-3p 6mer3-8 CCGTGA 3R 14119668 14119673 - 3R_14119668_14119673_- 0.998928615 1 0.999464308 0.000757594 Abi FBtr0112896|FBtr0337096|FBtr0082910|FBtr0337097|FBtr0307077|FBtr0307076 14119260|14119260|14119260|14119260|14119260|14119260 14120064|14120064|14120064|14120064|14120064|14120064 3R - 14119588 14119716 3'utr Abi FlyBase G50914.1 GTAGCCGAAAACGATGCAAGAAGGGGAAAGTGAAACCGGATACCCGTGAATAACTTATGCGATATTATAAAACTGTTCCACAACCGTAGACGAATTCTGTCCTGCTCCTGCCGCCAATCCAAATACTTT 28 14119661 0.97150218 12 26 154 0.965517241 1.447158031 0.413793103 0.035714286 0.068965517 28 1 0 28 3R:14119588-14119716 6 Abi FBtr0307077|FBtr0307076|FBtr0082910|FBtr0337097|FBtr0112896|FBtr0337096 14119260|14119260|14119260|14119260|14119260|14119260 14120064|14120064|14120064|14120064|14120064|14120064 CCGTGA 6mer3-8 dme-miR-2535b-3p 3R - 14119601 14119699 3'utr Abi FlyBase G38488.1 AAGAAGGGGAAAGTGAAACCGGATACCCGTGAATAACTTATGCGATATTATAAAACTGTTCCACAACCGTAGACGAATTCTGTCCTGCTCCTGCCGCCA 26 14119676 0.964732498 11 24 150 0.897435897 1.544068044 0.41025641 0.384615385 0.58974359 26 4 0 35 3R:14119601-14119699 6 13 3661 FBgn0020510 1356.63 69.31 106.3 0.009582569 0.187563122 0.12229539 -12 3 -4.5 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 3R 14119938 14119944 - 3R_14119938_14119944_- 0.823349562 0.823349562 0.823349562 0 Abi FBtr0112896|FBtr0337096|FBtr0082910|FBtr0337097|FBtr0307077|FBtr0307076 14119260|14119260|14119260|14119260|14119260|14119260 14120064|14120064|14120064|14120064|14120064|14120064 3R - 14119916 14119980 3'utr Abi FlyBase G50915.2 AGCTCCAAAAAATTTCAATTCAGTTATCGGAGAGTTAGACTGAGGACCGCAACAGACTCAGCTGA 39 14119946 0.814789467 5 37 169 0.958333333 1.662757832 0.125 0.230769231 0.375 39 2 0 46 3R:14119916-14119980 7 Abi FBtr0307077|FBtr0307076|FBtr0082910|FBtr0337097|FBtr0112896|FBtr0337096 14119260|14119260|14119260|14119260|14119260|14119260 14120064|14120064|14120064|14120064|14120064|14120064 AGACTGA 7mer-A1 dme-miR-14-3p 3R - 14119872 14119962 3'utr Abi FlyBase G38489.1 TTCAGTTATCGGAGAGTTAGACTGAGGACCGCAACAGACTCAGCTGACAATGACGATAAGATTTTGAGCATATTAATAAGGACAATTATAC 22 14119946 0.963587089 8 18 95 0.806451613 0.920818754 0.290322581 0.272727273 0.483870968 22 4 2 25 3R:14119872-14119962 7 27.5 3662 FBgn0020510 1356.63 69.31 106.3 0.020270818 0.396768143 0.258701787 2 2 2 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3R 14124383 14124388 + 3R_14124383_14124388_+ 1 1 1 0 twf FBtr0082891 14124186 14124474 3R + 14124307 14124455 3'utr twf FlyBase G42719.1 GTGTCTATATGTGTCCGTACGTCAGTCGATATCTTTAGAGGCACTAGGCATCAACTGAAACATCGCATAGCAGCCGCCAAAGTGGGCTTCCTTAAATGTATTCTTGTCTATGTAACTTTAGATGGACATATATGCAATTTATTTAAATT 50 14124389 0.982576027 12 46 350 0.919354839 1.755874856 0.161290323 0.22 0.370967742 50 5 0 57 3R:14124307-14124455 6 twf FBtr0082891 14124186 14124474 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 14124375 14124416 3'utr twf FlyBase G32277.1 AGCAGCCGCCAAAGTGGGCTTCCTTAAATGTATTCTTGTCTA 29 14124389 0.986317664 5 29 186 1 1.62324929 0.095238095 0.379310345 0.571428571 29 0 0 42 3R:14124375-14124416 6 28.5 3663 FBgn0038206 209.7033333 18.48666667 28.02333333 0.13590628 1.541651641 1.017009635 -6 -6 -6 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 14129950 14129955 + 3R_14129950_14129955_+ 0.966913901 1 0.98345695 0.023395406 RpII140 FBtr0344600 14129737 14130111 3R + 14129931 14129973 3'utr RpII140 FlyBase G42742.1 AAGTCTGCACGGGTTCAAGAGCTGTTAGTGGAATGTGATTTAT 10 14129971 0.657068896 5 7 65 0.692307692 0.954242509 0.461538462 0.3 0.461538462 10 4 0 9 3R:14129931-14129973 6 RpII140 FBtr0344600 14129737 14130111 AGCTGT 6mer3-8 dme-miR-1008-3p 3R + 14129917 14129976 3'utr RpII140 FlyBase G32297.1 CGTATTTTGGGCGAAAGTCTGCACGGGTTCAAGAGCTGTTAGTGGAATGTGATTTATTTG 9 14129934 0.991484959 6 6 57 0.769230769 1 0.769230769 0.444444444 0.615384615 9 3 0 10 3R:14129917-14129976 6 7.5 3664 FBgn0262955 617.2633333 19.18333333 29.26666667 0.012150406 0.390964379 0.256264237 -21 16 -2.5 0.01 dme-miR-2b-2-5p 7mer-m8 TTGAAGA 3R 14235033 14235039 - 3R_14235033_14235039_- 0.631525999 0.631525999 0.631525999 0 CG43291 FBtr0347150 14234982 14236679 3R - 14234881 14235071 3'utr CG43291 FlyBase G50928.1 AGGGGAGCCATAGCTGAAGCTGCACCCAGACTTTGAAGATACACTTGTAGAACGAGTGGTTACACCACCAAGATGGAGTATTTAAGTTAAAAACTTTAAGGATGTCACAACATGTATAGATTTAAGTGTATGTTTGCAAGGAAAAATGCCATAATATGTAAGGGAAAAAGTTATAGTTCCTTTAAAATTCT 32 14235038 0.97276967 14 31 185 0.96969697 1.204119983 0.272727273 0.03125 0.060606061 32 0 1 32 3R:14234881-14235071 7 CG43291 FBtr0347150 14234982 14236679 TTGAAGA 7mer-m8 dme-miR-2b-2-5p 3R - 14234965 14235060 3'utr CG43291 FlyBase G38496.1 AGCTGAAGCTGCACCCAGACTTTGAAGATACACTTGTAGAACGAGTGGTTACACCACCAAGATGGAGTATTTAAGTTAAAAACTTTAAGGATGTCA 18 14235038 0.93381821 5 18 72 1 1.462397998 0.206896552 0.444444444 0.655172414 18 0 0 29 3R:14234965-14235060 7 15 3665 FBgn0262983 11.66666667 1.006666667 1.546666667 1.285714286 14.90066225 9.698275862 -1 -1 -1 0.01 dme-miR-11-3p 7mer-m1 TGTGATG 3R 14235886 14235892 - 3R_14235886_14235892_- 0.612071121 0.612071121 0.612071121 0 CG43291 FBtr0347150 14234982 14236679 3R - 14235814 14235981 3'utr CG43291 FlyBase G50931.1 AGAAAGCACTCAAGGACCTGTGGGGCGGAATGAATGCAGCACTCAAAAGGAGGAGGACTCGGGTTACGTCGATTCAAGTAACCGAAGATTGTGATGGTGTCATGAATTTATGGTGCAGGGATATTAAAATGTCCCTCATCCTGAAAACTGGTTTACATTTGACCTATA 179 14235893 0.961521296 16 169 1039 0.948598131 1.353253528 0.186915888 0.173184358 0.308411215 179 3 8 203 3R:14235814-14235981 7 CG43291 FBtr0347150 14234982 14236679 TGTGATG 7mer-m1 dme-miR-11-3p 3R - 14235821 14236111 3'utr CG43291 FlyBase G38498.1 GAATCAACGATACTTGCAATTTCCGTGTCGAATCTTTATGCGAATGCATCTCGGAATGCTGGAGATGAATCTGGACCTGGTAACGGAGCCGAAGGAGGATGACAGCGACAGCGGATGCGGGAGCTTACCCAGAAAGCACTCAAGGACCTGTGGGGCGGAATGAATGCAGCACTCAAAAGGAGGAGGACTCGGGTTACGTCGATTCAAGTAACCGAAGATTGTGATGGTGTCATGAATTTATGGTGCAGGGATATTAAAATGTCCCTCATCCTGAAAACTGGTTTACATTTG 153 14235893 0.969897876 19 150 851 0.983122363 1.668385917 0.168776371 0.418300654 0.624472574 153 0 4 233 3R:14235821-14236111 7 141.5 3666 FBgn0262983 11.66666667 1.006666667 1.546666667 12.12857143 140.5629139 91.48706897 1 1 1 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 14256901 14256907 + 3R_14256901_14256907_+ 0.658999524 0.658876008 0.658937766 8.73E-05 CG43179 FBtr0306052 14256732 14256930 3R + 14256885 14256942 3'utr CG43179 FlyBase G42746.1 ATTCAGGCGTTCTTATGGCAGCTTTAAAAAAGCCATAATGACGGTTAAGGTCTCTGCA 14 14256900 0.981767122 4 14 100 1 1.204119983 0 0.142857143 0.25 14 0 0 16 3R:14256885-14256942 7 CG43179 FBtr0306052 14256732 14256930 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 14256886 14256913 3'utr CG43179 FlyBase G32298.1 TTCAGGCGTTCTTATGGCAGCTTTAAAA 6 14256900 0.726681212 3 5 43 0.833333333 0.698970004 0 0 0 6 1 0 5 3R:14256886-14256913 7 9 3667 FBgn0262808 15 2.723333333 4.116666667 0.6 3.304773562 2.186234818 1 1 1 0.01 dme-miR-980-3p 6mer3-8 GGCAGC 3R 14263455 14263460 - 3R_14263455_14263460_- 1 1 1 0 trx FBtr0082950|FBtr0082948|FBtr0082947|FBtr0082949 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 3R - 14263435 14263514 3'utr trx FlyBase G50948.2 TCCTATCGGGGCGATCGGTCAGACTTGTACAGGCAAAGTTCCATAGCATTTTTTGGCAGCCATTCAAGACGCGCGCACTT 62 14263461 0.781601175 9 51 404 0.826086957 1.278753601 0.086956522 0.096774194 0.188405797 62 10 2 57 3R:14263435-14263514 6 trx FBtr0082947|FBtr0082949|FBtr0082950|FBtr0082948 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 14263436 14263520 3'utr trx FlyBase G38508.1 GTATATTCCTATCGGGGCGATCGGTCAGACTTGTACAGGCAAAGTTCCATAGCATTTTTTGGCAGCCATTCAAGACGCGCGCACT 30 14263461 0.983629459 9 24 197 0.76744186 1.041392685 0.093023256 0.366666667 0.558139535 30 8 2 33 3R:14263436-14263520 6 36 3668 FBgn0003862 1984.743333 17.36 26.62333333 0.018138365 2.073732719 1.352197321 1 1 1 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3R 14264069 14264074 - 3R_14264069_14264074_- 1 1 1 0 trx FBtr0082950|FBtr0082948|FBtr0082947|FBtr0082949 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 3R - 14264058 14264091 3'utr trx FlyBase G50952.1 AATTACTTACAGGGGCTTGTGTTAGATTGTACAT 6 14264073 0.686116203 5 6 50 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 3R:14264058-14264091 6 trx FBtr0082947|FBtr0082949|FBtr0082950|FBtr0082948 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 14264053 14264089 3'utr trx FlyBase G38513.1 TTACTTACAGGGGCTTGTGTTAGATTGTACATATATT 11 14264073 0.687467593 4 9 97 0.894736842 0.929418926 0 0.363636364 0.631578947 11 1 1 17 3R:14264053-14264089 6 8.5 3669 FBgn0003862 1984.743333 17.36 26.62333333 0.00428267 0.489631336 0.319268812 -1 -1 -1 0.01 dme-miR-8-3p 7mer-m8 CAGTATT 3R 14264299 14264305 - 3R_14264299_14264305_- 0.661615243 0.661615243 0.661615243 0 trx FBtr0082950|FBtr0082948|FBtr0082947|FBtr0082949 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 3R - 14264280 14264328 3'utr trx FlyBase G50955.1 AAAGAACAGAAACTCGATGACGTCAGTATTCAAGGGGAGATAATTAATA 164 14264306 0.845182834 6 156 814 0.95959596 1.977723605 0.580808081 0.164634146 0.308080808 164 7 1 190 3R:14264280-14264328 7 trx FBtr0082947|FBtr0082949|FBtr0082950|FBtr0082948 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 CAGTATT 7mer-m8 dme-miR-8-3p 3R - 14264283 14264348 3'utr trx FlyBase G38514.1 ATATCCGAGCGATCGGAGTGAAAGAACAGAAACTCGATGACGTCAGTATTCAAGGGGAGATAATTA 98 14264306 0.835554401 7 94 460 0.973856209 2.173186268 0.424836601 0.448979592 0.647058824 98 4 0 149 3R:14264283-14264348 7 129.5 3670 FBgn0003862 1984.743333 17.36 26.62333333 0.065247731 7.459677419 4.864154251 1 1 1 0.01 dme-miR-283-5p 8mer-A1 TGATATTA 3R 14264401 14264408 - 3R_14264401_14264408_- 0.592192292 0.592192292 0.592192292 0 trx FBtr0082950|FBtr0082948|FBtr0082947|FBtr0082949 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 3R - 14264392 14264580 3'utr trx FlyBase G50956.1 CATTGCAAAAACTAATTGCTGCCCACAATGGGGGCAGAAAAAACTCACCTGGAATGAGAATTGAAACACTTGTAGTTAACGGTTATATCGATCTATGTTTGGTCAATCGTGATACTTTTCGTTTTACAACCCCCATACGTCTTAAGTAGTTGATATGTAAAAGTTAAACAGTTGATATTATTATATATC 36 14264408 0.988906463 22 32 294 0.888888889 1.602059991 0.2 0.25 0.4 36 5 0 40 3R:14264392-14264580 8 trx FBtr0082947|FBtr0082949|FBtr0082950|FBtr0082948 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 TGATATTA 8mer-A1 dme-miR-283-5p 3R - 14264396 14264530 3'utr trx FlyBase G38515.1 GGAATGAGAATTGAAACACTTGTAGTTAACGGTTATATCGATCTATGTTTGGTCAATCGTGATACTTTTCGTTTTACAACCCCCATACGTCTTAAGTAGTTGATATGTAAAAGTTAAACAGTTGATATTATTATA 27 14264409 0.988483977 17 25 223 0.916666667 1.041392685 0.416666667 0.259259259 0.444444444 27 1 2 33 3R:14264396-14264530 8 3.5 3671 FBgn0003862 1984.743333 17.36 26.62333333 0.001763452 0.201612903 0.131463628 0 1 0.5 0.01 dme-miR-999-3p 7mer-m8 AGTTAAC 3R 14264501 14264507 - 3R_14264501_14264507_- 0.674499303 0.674514267 0.674506785 1.06E-05 trx FBtr0082950|FBtr0082948|FBtr0082947|FBtr0082949 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 3R - 14264392 14264580 3'utr trx FlyBase G50956.1 CATTGCAAAAACTAATTGCTGCCCACAATGGGGGCAGAAAAAACTCACCTGGAATGAGAATTGAAACACTTGTAGTTAACGGTTATATCGATCTATGTTTGGTCAATCGTGATACTTTTCGTTTTACAACCCCCATACGTCTTAAGTAGTTGATATGTAAAAGTTAAACAGTTGATATTATTATATATC 36 14264478 0.988906463 22 32 294 0.888888889 1.602059991 0.2 0.25 0.4 36 5 0 40 3R:14264392-14264580 7 trx FBtr0082947|FBtr0082949|FBtr0082950|FBtr0082948 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 AGTTAAC 7mer-m8 dme-miR-999-3p 3R - 14264396 14264530 3'utr trx FlyBase G38515.1 GGAATGAGAATTGAAACACTTGTAGTTAACGGTTATATCGATCTATGTTTGGTCAATCGTGATACTTTTCGTTTTACAACCCCCATACGTCTTAAGTAGTTGATATGTAAAAGTTAAACAGTTGATATTATTATA 27 14264480 0.988483977 17 25 223 0.916666667 1.041392685 0.416666667 0.259259259 0.444444444 27 1 2 33 3R:14264396-14264530 7 7 3672 FBgn0003862 1984.743333 17.36 26.62333333 0.003526904 0.403225806 0.262927257 -29 -27 -28 0.01 dme-miR-184-5p 7mer-A1 GATAAGA 3R 14264905 14264911 - 3R_14264905_14264911_- 0.782911824 0.782911824 0.782911824 0 trx FBtr0082950|FBtr0082948|FBtr0082947|FBtr0082949 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 3R - 14264881 14264968 stop_codon trx FlyBase G50957.1 GCGGTTCGAAAAGGTGTCGGAAGTACTTAAATTAATAAAAGGAAGATCAGTGTCAGAGATAAGAACTAAGTATGACGCTGGGCGTCGA 17 14264909 0.949387951 6 16 77 1 1.255272505 0.277777778 0.058823529 0.111111111 17 0 0 18 3R:14264881-14264968 7 trx FBtr0082947|FBtr0082949|FBtr0082950|FBtr0082948|FBtr0100277 14263356|14263356|14263356|14263356|14264656 14264933|14264933|14264933|14264933|14264933 GATAAGA 7mer-A1 dme-miR-184-5p 3R - 14264877 14264920 3'utr trx FlyBase G38516.1 AGTGTCAGAGATAAGAACTAAGTATGACGCTGGGCGTCGAAATT 7 14264909 0.957099222 3 6 28 1 1.113943352 0.076923077 0.285714286 0.615384615 7 0 0 13 3R:14264877-14264920 7 9 3673 FBgn0003862 1984.743333 17.36 26.62333333 0.004534591 0.51843318 0.33804933 -2 -2 -2 0.01 dme-miR-988-3p 6mer3-8 ACAAGG 3R 14301757 14301762 + 3R_14301757_14301762_+ 1 1 1 0 CG12207 FBtr0309999|FBtr0309998|FBtr0082922|FBtr0344157|FBtr0082923|FBtr0309997|FBtr0082921 14301482|14301482|14301482|14301482|14301482|14301482|14301482 14302276|14302276|14302276|14302276|14302276|14302276|14302276 3R + 14301541 14301977 3'utr CG12207 FlyBase G42756.1 GTTTTTAATTGCCGCGCATTGGGGAGATGACTTTGGTCAGCATGTTACATCACACGGAAATGCCGCACTCTAAATGTAATATAAATAATGATATCTATCGACAAATATGCGCGATACCTTACCTATACGATAAAACATTAATGTAACTGAGCTAAAACCTAAACTAAACTATATACCTAAACTAAGCGCTGCGCTATGTAAACCTGTAGTACGATGACAAGGCAGTTCTGTAAACCCATTTTGATCTTGTGTCAGCCCTGTATAATTGCCGCCAATTTGCTTGCAAGATCCGATCTGAACCGCATCGAACAGATACGGAAGCCTTCTGTCCTCCTGTCCGCCCTCCTGCCCCCCATTATGTTTACTTTTTGTATGACTCTAGCTTTAATCACACTGTGTATAATTTAGTTATGAGAATTATTAATGTTAATTGTATA 1203 14301739 0.903712093 88 1101 7837 0.921708185 1.936178509 0.161565836 0.147963425 0.270462633 1203 96 14 1295 3R:14301541-14301977 6 CG12207 FBtr0344157|FBtr0082922|FBtr0309998|FBtr0309999|FBtr0082921|FBtr0309997|FBtr0082923 14301482|14301482|14301482|14301482|14301482|14301482|14301482 14302276|14302276|14302276|14302276|14302276|14302276|14302276 ACAAGG 6mer3-8 dme-miR-988-3p 3R + 14301545 14302027 3'utr CG12207 FlyBase G32309.1 TTAATTGCCGCGCATTGGGGAGATGACTTTGGTCAGCATGTTACATCACACGGAAATGCCGCACTCTAAATGTAATATAAATAATGATATCTATCGACAAATATGCGCGATACCTTACCTATACGATAAAACATTAATGTAACTGAGCTAAAACCTAAACTAAACTATATACCTAAACTAAGCGCTGCGCTATGTAAACCTGTAGTACGATGACAAGGCAGTTCTGTAAACCCATTTTGATCTTGTGTCAGCCCTGTATAATTGCCGCCAATTTGCTTGCAAGATCCGATCTGAACCGCATCGAACAGATACGGAAGCCTTCTGTCCTCCTGTCCGCCCTCCTGCCCCCCATTATGTTTACTTTTTGTATGACTCTAGCTTTAATCACACTGTGTATAATTTAGTTATGAGAATTATTAATGTTAATTGTATATAGTCGCCAGAAAACACAACAATCCAACTGGACTGCTCTGACCGCTAAAA 864 14301738 0.898534561 83 773 5436 0.909836066 1.744292983 0.169150522 0.393518519 0.609538003 864 100 21 1221 3R:14301545-14302027 6 55 3674 FBgn0038220 244.6666667 14.73 22.60333333 0.22479564 3.733876443 2.433269429 18 19 18.5 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3R 14302266 14302271 + 3R_14302266_14302271_+ 0.999976181 0.999999982 0.999988082 1.68E-05 CG12207 FBtr0309999|FBtr0309998|FBtr0082922|FBtr0344157|FBtr0082923|FBtr0309997|FBtr0082921 14301482|14301482|14301482|14301482|14301482|14301482|14301482 14302276|14302276|14302276|14302276|14302276|14302276|14302276 3R + 14302196 14302277 3'utr CG12207 FlyBase G42758.1 TATCGAACTGCACTCATATCGAGCCAAGTCATGTTGTACGTGAGAATGTTTTTTAAAATAAAGTGAGAATTGTGTTGGAACA 17 14302266 0.980212426 11 15 107 0.88 1.342422681 0.32 0.294117647 0.52 17 3 0 22 3R:14302196-14302277 6 CG12207 FBtr0344157|FBtr0082922|FBtr0309998|FBtr0309999|FBtr0082921|FBtr0309997|FBtr0082923 14301482|14301482|14301482|14301482|14301482|14301482|14301482 14302276|14302276|14302276|14302276|14302276|14302276|14302276 TGTGTT 6mer3-8 dme-miR-317-3p 3R + 14302225 14302278 3'utr CG12207 FlyBase G32312.1 CATGTTGTACGTGAGAATGTTTTTTAAAATAAAGTGAGAATTGTGTTGGAACAA 13 14302266 0.977309024 6 13 89 1 1.255272505 0 0.153846154 0.388888889 13 0 0 18 3R:14302225-14302278 6 8.5 3675 FBgn0038220 244.6666667 14.73 22.60333333 0.034741144 0.577053632 0.37605073 0 0 0 0.01 dme-miR-283-5p 8mer-A1 TGATATTA 3R 14319424 14319431 + 3R_14319424_14319431_+ 0.592192292 0.592192292 0.592192292 0 pr-set7 FBtr0082930|FBtr0082929|FBtr0309996 14318757|14318757|14318757 14320494|14319692|14319692 3R + 14319379 14319436 3'utr pr-set7 FlyBase G42771.1 AAGAACAAATTTATCAAAAAGACCTAGACTATACAGATTGTAAATTGATATTAGACCC 10 14319410 0.984999538 4 9 71 1 1.041392685 0 0.1 0.181818182 10 0 0 11 3R:14319379-14319436 8 pr-set7 FBtr0309996|FBtr0082929|FBtr0082930 14318757|14318757|14318757 14319692|14319692|14320494 TGATATTA 8mer-A1 dme-miR-283-5p 3R + 14319389 14319435 3'utr pr-set7 FlyBase G32321.1 TTATCAAAAAGACCTAGACTATACAGATTGTAAATTGATATTAGACC 10 14319410 0.73356217 3 9 52 1 1.204119983 0.25 0.5 0.6875 10 0 0 16 3R:14319389-14319435 8 5 3676 FBgn0011474 544.8566667 15.96333333 24.49 0.009176725 0.313217791 0.204164965 14 14 14 0.01 dme-miR-34-5p 7mer-A1 ACTGCCA 3R 14319837 14319843 + 3R_14319837_14319843_+ 0.823349562 0.823349547 0.823349554 7.07E-08 pr-set7 FBtr0082930 14318757 14320494 3R + 14319720 14319876 3'utr pr-set7 FlyBase G42774.1 AAGAGATGATGATGTTGATGAAGCCACGCATTCACATTGACAAGAATCGATTGTACACTATTTATATAGATATTTATATTAGATACATGTGTAATTTCTAACTATTACGTACTATTTACTGCCATAGAGCTATACACTCCCCCTCGCACCTGTCCCA 125 14319835 0.982639671 11 119 899 0.929032258 2.158362492 0.135483871 0.184 0.341935484 125 11 0 144 3R:14319720-14319876 7 pr-set7 FBtr0082930 14318757 14320494 ACTGCCA 7mer-A1 dme-miR-34-5p 3R + 14319806 14319864 3'utr pr-set7 FlyBase G32324.1 ATGTGTAATTTCTAACTATTACGTACTATTTACTGCCATAGAGCTATACACTCCCCCTC 56 14319835 0.983604819 7 50 391 0.94047619 1.420505837 0.202380952 0.375 0.583333333 56 3 2 79 3R:14319806-14319864 7 80.5 3677 FBgn0011474 544.8566667 15.96333333 24.49 0.147745279 5.042806431 3.287055941 2 2 2 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 14320608 14320613 - 3R_14320608_14320613_- 0.984916354 0.978072685 0.981494519 0.004839227 Afti FBtr0310001 14320189 14321785 3R - 14320521 14320662 3'utr Afti FlyBase G51003.1 AGAAGAACTCCCATGCATTCCAAGTGTAAATGAGTGTGACTGGTTGCCATGATGATCTCCAGGTAATCGCTGGAAAACGAAACCCAATCCGCTCCAGTTCTTGATTATTGTTTTGTTCGTGTTAATGTGTTTTCATTTATTT 172 14320610 0.986334636 13 162 1176 0.947368421 1.77815125 0.336842105 0.093023256 0.178947368 172 8 2 180 3R:14320521-14320662 6 Afti FBtr0310001 14320189 14321785 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R - 14320525 14320635 3'utr Afti FlyBase G38537.1 AAATGAGTGTGACTGGTTGCCATGATGATCTCCAGGTAATCGCTGGAAAACGAAACCCAATCCGCTCCAGTTCTTGATTATTGTTTTGTTCGTGTTAATGTGTTTTCATTT 117 14320610 0.992688842 13 113 743 0.950819672 2.240549248 0.273224044 0.41025641 0.62295082 117 9 0 174 3R:14320525-14320635 6 109.5 3678 FBgn0038223 625.08 17.01666667 26.15666667 0.175177577 6.434867777 4.186313241 -3 -3 -3 0.01 dme-miR-1008-3p 7mer-m8 AGCTGTG 3R 14321572 14321578 - 3R_14321572_14321578_- 0.668728887 0.671795832 0.67026236 0.002168626 Afti FBtr0310001|FBtr0310000|FBtr0273391 14320189|14321075|14321377 14321785|14321785|14321785 3R - 14321469 14321680 3'utr Afti FlyBase G51009.1 TAGGCGAAAGGATCGATCGCGCACCCGGGTAGCCAGTCAGTATTATGAATCCGTCTGATATTCACCATAATCCGAACCGTCACACATTGTAGTTTTGAGGCAAGCTGTGTTCCATGTTGTTGTCGTTGTTGTTAACCTTGTCGTTGGCATAATTGTTGTTGTTGTTGTGCATGCATGTTGTAGTCTTAGGCGTAAAAATCAGGATTTAGAAC 207 14321585 0.93296828 36 192 1460 0.923076923 1.755874856 0.295546559 0.169082126 0.303643725 207 16 3 228 3R:14321469-14321680 7 Afti FBtr0310001|FBtr0310000|FBtr0273391 14320189|14321075|14321377 14321785|14321785|14321785 AGCTGTG 7mer-m8 dme-miR-1008-3p 3R - 14321483 14321678 3'utr Afti FlyBase G38542.1 GGCGAAAGGATCGATCGCGCACCCGGGTAGCCAGTCAGTATTATGAATCCGTCTGATATTCACCATAATCCGAACCGTCACACATTGTAGTTTTGAGGCAAGCTGTGTTCCATGTTGTTGTCGTTGTTGTTAACCTTGTCGTTGGCATAATTGTTGTTGTTGTTGTGCATGCATGTTGTAGTCTTAGGCGTAAAAA 124 14321585 0.981708501 25 108 858 0.882926829 2.257678575 0.27804878 0.411290323 0.643902439 124 24 0 181 3R:14321483-14321678 7 41.5 3679 FBgn0038223 625.08 17.01666667 26.15666667 0.066391502 2.438785504 1.586593603 7 7 7 0.01 dme-miR-8-3p 8mer-A1 CAGTATTA 3R 14321636 14321643 - 3R_14321636_14321643_- 0.671698124 0.671698124 0.671698124 0 Afti FBtr0310001|FBtr0310000|FBtr0273391 14320189|14321075|14321377 14321785|14321785|14321785 3R - 14321469 14321680 3'utr Afti FlyBase G51009.1 TAGGCGAAAGGATCGATCGCGCACCCGGGTAGCCAGTCAGTATTATGAATCCGTCTGATATTCACCATAATCCGAACCGTCACACATTGTAGTTTTGAGGCAAGCTGTGTTCCATGTTGTTGTCGTTGTTGTTAACCTTGTCGTTGGCATAATTGTTGTTGTTGTTGTGCATGCATGTTGTAGTCTTAGGCGTAAAAATCAGGATTTAGAAC 207 14321644 0.93296828 36 192 1460 0.923076923 1.755874856 0.295546559 0.169082126 0.303643725 207 16 3 228 3R:14321469-14321680 8 Afti FBtr0310001|FBtr0310000|FBtr0273391 14320189|14321075|14321377 14321785|14321785|14321785 CAGTATTA 8mer-A1 dme-miR-8-3p 3R - 14321483 14321678 3'utr Afti FlyBase G38542.1 GGCGAAAGGATCGATCGCGCACCCGGGTAGCCAGTCAGTATTATGAATCCGTCTGATATTCACCATAATCCGAACCGTCACACATTGTAGTTTTGAGGCAAGCTGTGTTCCATGTTGTTGTCGTTGTTGTTAACCTTGTCGTTGGCATAATTGTTGTTGTTGTTGTGCATGCATGTTGTAGTCTTAGGCGTAAAAA 124 14321644 0.981708501 25 108 858 0.882926829 2.257678575 0.27804878 0.411290323 0.643902439 124 24 0 181 3R:14321483-14321678 8 70 3680 FBgn0038223 625.08 17.01666667 26.15666667 0.111985666 4.113614104 2.67618198 1 1 1 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 14327697 14327702 + 3R_14327697_14327702_+ 1 1 1 0 CG3321 FBtr0082931|FBtr0082932|FBtr0303795 14327535|14327535|14327535 14327735|14327735|14327735 3R + 14327671 14327724 3'utr CG3321 FlyBase G42778.1 CGTTTTTGTGTTTTCCTCTGATGCTTGTGCAAAAAACAGAATGTTCGAAATTAA 15 14327693 0.989141134 6 14 129 0.894736842 1.230448921 0.315789474 0.266666667 0.421052632 15 2 0 17 3R:14327671-14327724 6 CG3321 FBtr0303795|FBtr0082931|FBtr0082932 14327535|14327535|14327535 14327735|14327735|14327735 GTGCAA 6mer3-8 dme-miR-92b-3p 3R + 14327668 14327705 3'utr CG3321 FlyBase G32325.1 TATCGTTTTTGTGTTTTCCTCTGATGCTTGTGCAAAAA 5 14327692 0.984175576 4 5 41 1 0.903089987 0 0.6 0.75 5 0 0 8 3R:14327668-14327705 6 8 3681 FBgn0038224 1345.333333 334.8866667 513.9866667 0.005946482 0.023888679 0.015564606 4 5 4.5 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 3R 14329789 14329795 - 3R_14329789_14329795_- 0.782911824 0.782911824 0.782911824 0 NK7.1 FBtr0306742 14329411 14330223 3R - 14329783 14329810 3'utr NK7.1 FlyBase G51024.1 ATTTATTGAGTGTTTGTACAAAAAAGGA 32 14329797 0.60890308 3 31 164 0.977272727 1.33243846 0.363636364 0.28125 0.477272727 32 0 1 43 3R:14329783-14329810 7 NK7.1 FBtr0306742 14329411 14330223 GTACAAA 7mer-A1 dme-miR-305-5p 3R - 14329782 14329810 3'utr NK7.1 FlyBase G38550.1 ATTTATTGAGTGTTTGTACAAAAAAGGAA 11 14329797 0.931052901 2 10 61 0.857142857 1.079181246 0.214285714 0.272727273 0.428571429 11 2 0 12 3R:14329782-14329810 7 21.5 3682 FBgn0024321 1080.813333 40.77666667 62.79666667 0.019892427 0.527262323 0.342374861 2 2 2 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 14329921 14329927 - 3R_14329921_14329927_- 0.754178804 0.754178803 0.754178803 0 NK7.1 FBtr0306742|FBtr0306742|FBtr0306742 14329411|14329411|14329411 14330223|14330223|14330223 3R - 14329816 14329964 3'utr NK7.1 FlyBase G51025.1 CTATGGCAAATTGTAATCTGAACTTTTGAGAATTTCATGTGATAATGTATACGAGGCGATTACAAAATTGATTTTACTACTTGAACTATGAACTATACTATGTATGTAGGCCTGTAAGCTCTGCTACCCTGTAAATTGCAATTGAATGA 50 14329931 0.985662963 17 44 364 0.911764706 1.491361694 0.588235294 0.22 0.426470588 50 5 1 62 3R:14329816-14329964 7 NK7.1 FBtr0306742|FBtr0306742|FBtr0306742 14329411|14329411|14329411 14330223|14330223|14330223 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 14329885 14329962 3'utr NK7.1 FlyBase G38552.1 ATGGCAAATTGTAATCTGAACTTTTGAGAATTTCATGTGATAATGTATACGAGGCGATTACAAAATTGATTTTACTAC 46 14329931 0.988247724 10 38 348 0.825396825 0.937852093 0.492063492 0.304347826 0.492063492 46 6 5 52 3R:14329885-14329962 7 36 3683 FBgn0024321 1080.813333 40.77666667 62.79666667 0.033308249 0.882857844 0.573278836 4 4 4 0.01 dme-miR-263a-5p 6mer3-8 GTGCCA 3R 14330190 14330195 - 3R_14330190_14330195_- 0.999574063 0.982337137 0.9909556 0.0121884 NK7.1 FBtr0306742|FBtr0082941|FBtr0082942|FBtr0347151 14329411|14330138|14330138|14330138 14330223|14330223|14330223|14330223 3R - 14330161 14330212 3'utr NK7.1 FlyBase G51028.1 CACAGTCAAATTAACTTGTGCCAAAAAGTCGAATATTGCTCATCCACAAAGA 12 14330194 0.964303215 3 12 62 1 1.230448921 0 0.333333333 0.529411765 12 0 0 17 3R:14330161-14330212 6 NK7.1 FBtr0347151|FBtr0082942|FBtr0082941|FBtr0306742 14330138|14330138|14330138|14329411 14330223|14330223|14330223|14330223 GTGCCA 6mer3-8 dme-miR-263a-5p 3R - 14330175 14330205 3'utr NK7.1 FlyBase G38554.1 AAATTAACTTGTGCCAAAAAGTCGAATATTG 7 14330195 0.757781504 3 6 33 0.888888889 0.903089987 0 0.142857143 0.333333333 7 1 0 8 3R:14330175-14330205 6 8.5 3684 FBgn0024321 1080.813333 40.77666667 62.79666667 0.007864448 0.208452546 0.135357503 -1 0 -0.5 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3R 14358544 14358549 - 3R_14358544_14358549_- 1 1 1 0 CG31320 FBtr0082943 14358354 14358599 3R - 14358537 14358570 5'utr CG31320 FlyBase G51039.1 ATTAGATTTATTTTACCAATTTGTGTTGCAAATT 12 14358550 0.783606642 3 11 143 0.923076923 1.079181246 0 0.083333333 0.153846154 12 1 0 12 3R:14358537-14358570 6 CG31320 FBtr0082943 14358354 14358599 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 14358532 14358566 5'utr CG31320 FlyBase G38560.1 GATTTATTTTACCAATTTGTGTTGCAAATTAAGCT 6 14358549 0.747476916 2 6 62 1 0.954242509 0.222222222 0.5 0.666666667 6 0 0 9 3R:14358532-14358566 6 9 3685 FBgn0051320 281 9.873333333 15.10666667 0.03202847 0.911546253 0.59576346 1 0 0.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 3R 14392067 14392073 - 3R_14392067_14392073_- 0.823349562 0.823349562 0.823349562 0 cv-c FBtr0112631|FBtr0112630|FBtr0112632 14391681|14391681|14391681 14392774|14392774|14392774 3R - 14392047 14392128 3'utr cv-c FlyBase G51047.2 TTGTCAGCAGATATTGATTGATTTGGCTTCAGATGTTGTTTGATTGACGCCGCATTACCTGAACATGTATCTGTTAATAAAC 132 14392074 0.958976686 14 118 691 0.909090909 1.124938737 0.289772727 0.234848485 0.426136364 132 5 11 160 3R:14392047-14392128 7 cv-c FBtr0112631|FBtr0112630|FBtr0112632 14391681|14391681|14391681 14392774|14392774|14392774 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R - 14392051 14392132 3'utr cv-c FlyBase G38564.2 AGTTTTGTCAGCAGATATTGATTGATTTGGCTTCAGATGTTGTTTGATTGACGCCGCATTACCTGAACATGTATCTGTTAAT 99 14392074 0.977428418 9 89 496 0.865384615 0.984205733 0.243589744 0.383838384 0.608974359 99 8 13 135 3R:14392051-14392132 7 105.5 3686 FBgn0086901 1575.736667 21.11333333 32.53666667 0.066952811 4.996842438 3.242495646 1 1 1 0.01 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3R 14619499 14619505 - 3R_14619499_14619505_- 0.620204031 0.620204031 0.620204031 0 put FBtr0334030 14619028 14621033 3R - 14619482 14619523 3'utr put FlyBase G51116.1 AATTTGTATATTTTCCATTGGTGCTGAAACATCATTACGACG 36 14619506 0.779326452 2 35 298 0.976744186 1.62324929 0.023255814 0.166666667 0.302325581 36 1 0 42 3R:14619482-14619523 7 put FBtr0334030 14619028 14621033 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3R - 14619488 14619527 3'utr put FlyBase G38611.1 ATTTAATTTGTATATTTTCCATTGGTGCTGAAACATCATT 24 14619506 0.78849297 2 24 213 1 1.531478917 0.029411765 0.333333333 0.529411765 24 0 0 34 3R:14619488-14619527 7 30 3687 FBgn0003169 711.0033333 31.18333333 47.85 0.042193895 0.962052378 0.626959248 1 1 1 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 3R 14620629 14620634 - 3R_14620629_14620634_- 1 1 1 0 put FBtr0330227|FBtr0082977|FBtr0334030 14620328|14620328|14619028 14621021|14621033|14621033 3R - 14620602 14620700 3'utr put FlyBase G51120.1 AACTTTGAACAAAGAGCATTAGCTATGTCCAGAGACGTGGTAGTTGCTAATCCGACATTGACTTCATTGACTGATAACCATATATAGTTCTATATAAAT 669 14620634 0.717071033 20 623 5039 0.933174224 1.570987458 0.087112172 0.191330344 0.354415274 669 36 20 782 3R:14620602-14620700 6 put FBtr0334030|FBtr0330227|FBtr0082977 14619028|14620328|14620328 14621033|14621021|14621033 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 14620451 14620686 3'utr put FlyBase G38612.1 AGCATTAGCTATGTCCAGAGACGTGGTAGTTGCTAATCCGACATTGACTTCATTGACTGATAACCATATATAGTTCTATATAAATCATACATATAACGTACAATTTGTTTTGCCCTCTGGCAGTAGCCTGTGTGCATATGTAAACTGTTGAAAATTATCGTCAAGCCTTTTAAAGTATAATTTTATTTGTACGTTATCGAATGTCTTCATATAGTAGTAGTTTTATATTTAAAGTT 551 14620634 0.826500775 27 505 4201 0.921857305 1.419262711 0.07587769 0.406533575 0.629671574 551 39 30 814 3R:14620451-14620686 6 573 3688 FBgn0003169 711.0033333 31.18333333 47.85 0.805903395 18.37520043 11.97492163 0 0 0 0.01 dme-miR-980-3p 7mer-A1 GCAGCTA 3R 14620882 14620888 - 3R_14620882_14620888_- 0.823349562 0.823349562 0.823349562 0 put FBtr0330227|FBtr0082977|FBtr0334030 14620328|14620328|14619028 14621021|14621033|14621033 3R - 14620860 14621005 3'utr put FlyBase G51122.1 CGGATCTGTGGCTCTGCAAAAAAATCAGTTGAAGCTTTTTGCTTCGTAGTGGATAGTTGATCGTCGAGGTCGTAAGACGTTTCGTTTTTAGTTTAATAGTTTGTAGTACCATTATAAGCAGCTATAGAATGGGTTGATTTATACGA 84 14620881 0.972997113 21 71 721 0.862745098 1.467361417 0.176470588 0.178571429 0.323529412 84 12 2 88 3R:14620860-14621005 7 put FBtr0334030|FBtr0330227|FBtr0082977 14619028|14620328|14620328 14621033|14621021|14621033 GCAGCTA 7mer-A1 dme-miR-980-3p 3R - 14620862 14620916 3'utr put FlyBase G38614.1 AGTTTAATAGTTTGTAGTACCATTATAAGCAGCTATAGAATGGGTTGATTTATAC 38 14620892 0.794423129 12 30 352 0.777777778 1.322219295 0.018518519 0.342105263 0.537037037 38 11 1 42 3R:14620862-14620916 7 43.5 3689 FBgn0003169 711.0033333 31.18333333 47.85 0.061181148 1.394975949 0.909090909 -7 4 -1.5 0.01 dme-miR-965-3p 7mer-m8 TACGCTT 3R 14643610 14643616 - 3R_14643610_14643616_- 0.620204855 0.620204855 0.620204855 0 l(3)L1231 FBtr0344158 14642670 14644934 3R - 14643557 14643656 3'utr l(3)L1231 FlyBase G51134.1 ATATTTATACAACAATACACAAAACAAGCAAGAAAACTGTTACGCTTTAAAATACGATATATACCGCTCACTGGAGACCGATCCCCAAATCACAGCCCTC 854 14643617 0.968733296 12 842 4678 0.986434109 2.229596528 0.076550388 0.162763466 0.307170543 854 9 5 1018 3R:14643557-14643656 7 l(3)L1231 FBtr0344158 14642670 14644934 TACGCTT 7mer-m8 dme-miR-965-3p 3R - 14643508 14643638 3'utr l(3)L1231 FlyBase G38625.1 ACAAAACAAGCAAGAAAACTGTTACGCTTTAAAATACGATATATACCGCTCACTGGAGACCGATCCCCAAATCACAGCCCTCAAGAAAACAAAACAAAAAAATTCACACCCAAACCATTCCATCTCCATCC 604 14643617 0.968729591 13 595 3317 0.982778416 2.330413773 0.09184845 0.324503311 0.531572905 604 12 3 856 3R:14643508-14643638 7 713 3690 FBgn0086686 1443.953333 29.16666667 44.69666667 0.493783271 24.44571429 15.95197256 1 1 1 0.01 dme-miR-988-3p 8mer-A1 ACAAGGGA 3R 14644095 14644102 - 3R_14644095_14644102_- 0.612188 0.61221408 0.61220104 1.85E-05 l(3)L1231 FBtr0344158 14642670 14644934 3R - 14644045 14644129 3'utr l(3)L1231 FlyBase G51138.1 AAACACCAACACACATACATACAACGTACAAGGGACTAGTTTGAAACCGCGAATCGTATTACTAAATATATATACAACTATATAT 330 14644103 0.925916552 13 301 1526 0.920716113 2.255272505 0.046035806 0.151515152 0.283887468 330 30 1 360 3R:14644045-14644129 8 l(3)L1231 FBtr0344158 14642670 14644934 ACAAGGGA 8mer-A1 dme-miR-988-3p 3R - 14644047 14644125 3'utr l(3)L1231 FlyBase G38630.1 ACCAACACACATACATACAACGTACAAGGGACTAGTTTGAAACCGCGAATCGTATTACTAAATATATATACAACTATAT 191 14644103 0.864646904 14 164 922 0.868327402 1.387389826 0.088967972 0.35078534 0.558718861 191 28 9 244 3R:14644047-14644125 8 225.5 3691 FBgn0086686 1443.953333 29.16666667 44.69666667 0.156168482 7.731428571 5.04511895 1 1 1 0.01 dme-miR-932-5p 6mer2-7 GAATTG 3R 14644229 14644234 - 3R_14644229_14644234_- 1 1 1 0 l(3)L1231 FBtr0344158 14642670 14644934 3R - 14644204 14644294 3'utr l(3)L1231 FlyBase G51140.1 TGTTTAAAAATTTTGTGAACGCATTTACAACAACAACCACAACACCATACACTCAAATGAGAATTGCAAGAACTACGAAAACAAAACAGGT 42 14644230 0.957889115 8 40 193 0.962264151 1.707570176 0.150943396 0.214285714 0.377358491 42 2 0 51 3R:14644204-14644294 6 l(3)L1231 FBtr0344158 14642670 14644934 GAATTG 6mer2-7 dme-miR-932-5p 3R - 14644212 14644293 3'utr l(3)L1231 FlyBase G38631.1 GTTTAAAAATTTTGTGAACGCATTTACAACAACAACCACAACACCATACACTCAAATGAGAATTGCAAGAACTACGAAAACA 14 14644230 0.96623267 5 13 74 0.916666667 1.342422681 0.208333333 0.642857143 0.791666667 14 2 0 22 3R:14644212-14644293 6 16 3692 FBgn0086686 1443.953333 29.16666667 44.69666667 0.011080691 0.548571429 0.357968529 -4 -4 -4 0.01 dme-miR-277-3p 7mer-A1 GCATTTA 3R 14644268 14644274 - 3R_14644268_14644274_- 0.823349562 0.823267342 0.823308452 5.82E-05 l(3)L1231 FBtr0344158 14642670 14644934 3R - 14644204 14644294 3'utr l(3)L1231 FlyBase G51140.1 TGTTTAAAAATTTTGTGAACGCATTTACAACAACAACCACAACACCATACACTCAAATGAGAATTGCAAGAACTACGAAAACAAAACAGGT 42 14644283 0.957889115 8 40 193 0.962264151 1.707570176 0.150943396 0.214285714 0.377358491 42 2 0 51 3R:14644204-14644294 7 l(3)L1231 FBtr0344158 14642670 14644934 GCATTTA 7mer-A1 dme-miR-277-3p 3R - 14644212 14644293 3'utr l(3)L1231 FlyBase G38631.1 GTTTAAAAATTTTGTGAACGCATTTACAACAACAACCACAACACCATACACTCAAATGAGAATTGCAAGAACTACGAAAACA 14 14644282 0.96623267 5 13 74 0.916666667 1.342422681 0.208333333 0.642857143 0.791666667 14 2 0 22 3R:14644212-14644293 7 11 3693 FBgn0086686 1443.953333 29.16666667 44.69666667 0.007617975 0.377142857 0.246103363 9 8 8.5 0.01 dme-miR-79-3p 7mer-A1 AGCTTTA 3R 14644451 14644457 - 3R_14644451_14644457_- 0.823349562 0.823349562 0.823349562 0 l(3)L1231 FBtr0344158 14642670 14644934 3R - 14644348 14644486 3'utr l(3)L1231 FlyBase G51141.1 AGTGAACCAACAAAAGGATTGTAGAGATCAGCTTTATTATACATATAAACGAGAAATTATAAAACAATACCAGAGCAAACAGATAAAATGAAACCGAAATTGTAGGAAATCTAGCAACAAATTTTGAATTCTGAATTAA 32 14644459 0.988820663 10 30 273 0.972222222 1.243038049 0.194444444 0.125 0.222222222 32 0 1 35 3R:14644348-14644486 7 l(3)L1231 FBtr0344158 14642670 14644934 AGCTTTA 7mer-A1 dme-miR-79-3p 3R - 14644437 14644476 3'utr l(3)L1231 FlyBase G38632.1 CAAAAGGATTGTAGAGATCAGCTTTATTATACATATAAAC 7 14644459 0.896624985 2 5 59 0.909090909 0.698970004 0 0.428571429 0.636363636 7 0 1 10 3R:14644437-14644476 7 14.5 3694 FBgn0086686 1443.953333 29.16666667 44.69666667 0.010041876 0.497142857 0.324408979 2 2 2 0.01 dme-miR-304-5p 6mer2-7 GAGATT 3R 14644865 14644870 - 3R_14644865_14644870_- 1 1 1 0 l(3)L1231 FBtr0304678|FBtr0344158|FBtr0082975 14644667|14642670|14644667 14644934|14644934|14644934 3R - 14644817 14644925 3'utr l(3)L1231 FlyBase G51144.1 CAGGTCGGATTTATGGCCTACAGAATTTACAGATTCATTTAGAGAGACAGAGAGAGAGATTTTCAAGCTTGATTTCCCATTCACTTTTAGGCAGTTTTCGCTTAGAATT 27 14644864 0.836978305 14 25 222 0.939393939 1.491361694 0.090909091 0.148148148 0.303030303 27 2 0 31 3R:14644817-14644925 6 l(3)L1231 FBtr0082975|FBtr0344158|FBtr0304678 14644667|14642670|14644667 14644934|14644934|14644934 GAGATT 6mer2-7 dme-miR-304-5p 3R - 14644807 14644882 3'utr l(3)L1231 FlyBase G38633.1 GAGACAGAGAGAGAGATTTTCAAGCTTGATTTCCCATTCACTTTTAGGCAGTTTTCGCTTAGAATTTCGGTATTTT 10 14644865 0.989527068 8 10 100 1 1.255272505 0.277777778 0.6 0.777777778 10 0 0 18 3R:14644807-14644882 6 7.5 3695 FBgn0086686 1443.953333 29.16666667 44.69666667 0.005194074 0.257142857 0.167797748 -6 -5 -5.5 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3R 14660877 14660882 + 3R_14660877_14660882_+ 1 1 1 0 Hexim FBtr0082968|FBtr0082967 14660834|14660834 14661177|14661177 3R + 14660854 14660922 3'utr Hexim FlyBase G42800.1 GTCACTCCGCCGTGTGTAAATAAAAGACTCAATTGTGGTAGAATGTGGCGATAAATGGACATAATCCTT 91 14660886 0.96914746 4 87 489 0.955357143 1.728353782 0.357142857 0.197802198 0.348214286 91 4 1 107 3R:14660854-14660922 6 Hexim FBtr0082967|FBtr0082968 14660834|14660834 14661177|14661177 AAGACT 6mer3-8 dme-miR-14-3p 3R + 14660844 14660919 3'utr Hexim FlyBase G32336.1 AGAAGAGTATGTCACTCCGCCGTGTGTAAATAAAAGACTCAATTGTGGTAGAATGTGGCGATAAATGGACATAATC 58 14660886 0.964470322 6 58 303 1 1.929418926 0.388235294 0.344827586 0.552941176 58 0 0 85 3R:14660844-14660919 6 68.5 3696 FBgn0038251 196.3333333 15.84 24.28666667 0.348896435 4.324494949 2.820477628 -9 -9 -9 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 3R 14665350 14665355 - 3R_14665350_14665355_- 0.999985546 1 0.999992773 1.03E-05 Meltrin FBtr0301498 14664905 14665836 3R - 14665297 14665360 3'utr Meltrin FlyBase G51174.1 AACTCATGTGCTAAGTATGTATGTATCTCAATGGTTAATGTTTAAGCGCTGCATGTGAAGTTTT 50 14665339 0.780961956 6 46 467 0.903225806 1.748188027 0.193548387 0.16 0.322580645 50 6 0 56 3R:14665297-14665360 6 Meltrin FBtr0301498 14664905 14665836 ATGTGC 6mer3-8 dme-miR-305-3p 3R - 14665313 14665371 3'utr Meltrin FlyBase G38661.1 AGGCGTTGCTTAACTCATGTGCTAAGTATGTATGTATCTCAATGGTTAATGTTTAAGCG 34 14665339 0.989257342 8 30 289 0.945454545 1.716003344 0.090909091 0.382352941 0.618181818 34 3 0 52 3R:14665313-14665371 6 11.5 3697 FBgn0265140 3037.87 84.61666667 129.9866667 0.003785547 0.135907032 0.088470612 -16 -16 -16 0.01 dme-miR-278-3p 6mer3-8 CCCACC 3R 14697842 14697847 - 3R_14697842_14697847_- 0.976472829 0.984855964 0.980664397 0.005927818 kibra FBtr0344383 14697687 14698883 3R - 14697713 14697881 3'utr kibra FlyBase G51202.1 TGTTTATGTTTTCACTAACCAGACCCAGCCTCTTCCCACCCCAAAATGTAGCAAGTAGTAGTATGAGTAGAATGAGAGTCGCCACACATATTTTTTCAATACCATAGTAATTTTAGTTGTAATAAATTATATGAAAGTGAACCTGTATATTGTAATTGTGCAATAAACA 30 14697849 0.975370804 14 27 167 0.951219512 1.591064607 0.073170732 0.2 0.414634146 30 2 0 39 3R:14697713-14697881 6 kibra FBtr0344383 14697687 14698883 CCCACC 6mer3-8 dme-miR-278-3p 3R - 14697816 14697868 3'utr kibra FlyBase G38686.1 ACTAACCAGACCCAGCCTCTTCCCACCCCAAAATGTAGCAAGTAGTAGTATGA 13 14697849 0.73934675 4 11 38 0.708333333 1.230448921 0 0.538461538 0.75 13 7 0 17 3R:14697816-14697868 6 11 3698 FBgn0262127 353.3166667 7.533333333 11.64333333 0.031133544 1.460176991 0.944746636 2 2 2 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 3R 14698004 14698009 - 3R_14698004_14698009_- 1 1 1 0 kibra FBtr0344383 14697687 14698883 3R - 14697978 14698076 3'utr kibra FlyBase G51204.1 CATAAAAGTGAGAGAAAATATAAAATTAAACCTTGTTATGCTTTCCCAAGCGGACCTGTTAAAACTGTTGACTTTGAAACTGTGCCGTGGTGCACTGAG 22 14698003 0.806828484 13 22 151 1 1.397940009 0.2 0.136363636 0.24 22 0 0 25 3R:14697978-14698076 6 kibra FBtr0344383 14697687 14698883 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 14697981 14698051 3'utr kibra FlyBase G38687.1 TTAAACCTTGTTATGCTTTCCCAAGCGGACCTGTTAAAACTGTTGACTTTGAAACTGTGCCGTGGTGCACT 16 14698009 0.983872482 8 15 117 0.961538462 1.397940009 0.153846154 0.375 0.615384615 16 1 0 25 3R:14697981-14698051 6 13.5 3699 FBgn0262127 353.3166667 7.533333333 11.64333333 0.038209349 1.792035398 1.159461781 -6 0 -3 0.01 dme-miR-980-3p 7mer-A1 GCAGCTA 3R 14698372 14698378 - 3R_14698372_14698378_- 0.823349562 0.823349562 0.823349562 0 kibra FBtr0344383 14697687 14698883 3R - 14698300 14698514 3'utr kibra FlyBase G51207.1 AAAAACCAAGAAACAAGGAATATCAACACAATAACGCGCACATTGTGCGTTCAATGCCTTCAAATTCATATTGAAACCAACTGTATTCTTAAGACTTGAGCAAAAATTATACGAATGTTTATGAATATTTTTATACGCAGCTAGTTAGGATAGTTAACCCAAGCCACATATACACAAAACGTGAGGAGAACGTAAAATATTTATTATACTGATGG 73 14698383 0.99947005 30 68 537 0.938271605 1.880813592 0.160493827 0.109589041 0.197530864 73 5 0 76 3R:14698300-14698514 7 kibra FBtr0344383 14697687 14698883 GCAGCTA 7mer-A1 dme-miR-980-3p 3R - 14698205 14698473 3'utr kibra FlyBase G38689.1 ATTGTGCGTTCAATGCCTTCAAATTCATATTGAAACCAACTGTATTCTTAAGACTTGAGCAAAAATTATACGAATGTTTATGAATATTTTTATACGCAGCTAGTTAGGATAGTTAACCCAAGCCACATATACACAAAACGTGAGGAGAACGTAAAATATTTATTATACTGATGGATCGATCGACGTCGCGCTCGAATCCAGTCGTTTAGGTTAGTTAGCTTGCGTTTTTGTTAAGCTTAAAACGAATTCTTATACTGTAATTTTTTTTA 41 14698383 0.986053456 23 37 338 0.929824561 1.72427587 0.175438596 0.341463415 0.526315789 41 4 0 53 3R:14698205-14698473 7 23 3700 FBgn0262127 353.3166667 7.533333333 11.64333333 0.06509741 3.053097345 1.97537933 5 5 5 0.01 dme-miR-1007-3p 6mer3-8 TGAGCT 3R 14724833 14724838 - 3R_14724833_14724838_- 0.995239855 0.992900963 0.994070409 0.001653852 CG7530 FBtr0083021|FBtr0083020|FBtr0333277|FBtr0083019 14724758|14724758|14724758|14724758 14725158|14725158|14725158|14725158 3R - 14724808 14724870 3'utr CG7530 FlyBase G51232.1 ATTAAACAATGTCAATGAAATTGCATGTGTCTTGAGCTGAAGCTGTGTTAGTCTTGTTGACTC 30 14724818 0.785028927 12 24 272 0.794117647 1.431363764 0.323529412 0.133333333 0.235294118 30 7 0 27 3R:14724808-14724870 6 CG7530 FBtr0333277|FBtr0083019|FBtr0083021|FBtr0083020 14724758|14724758|14724758|14724758 14725158|14725158|14725158|14725158 TGAGCT 6mer3-8 dme-miR-1007-3p 3R - 14724799 14724978 3'utr CG7530 FlyBase G38710.1 TTAGTTAGGGTTTCGTGTTAGACAATCCAGATCCAGATAGTTGGCATCGCATAAGCGGCAAAAAGGTTTCTCTCTTTATATCCTAATTGATTTCCTTTAATATATACAATTAAACAATGTCAATGAAATTGCATGTGTCTTGAGCTGAAGCTGTGTTAGTCTTGTTGACTCAATTTTTAC 46 14724818 0.989870308 23 42 420 0.924242424 1.484299839 0.227272727 0.347826087 0.545454545 46 4 1 61 3R:14724799-14724978 6 24.5 3701 FBgn0038256 709.2933333 50.04333333 76.62666667 0.034541422 0.489575701 0.319732034 -20 -20 -20 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 14725087 14725092 - 3R_14725087_14725092_- 1 1 1 0 CG7530 FBtr0083021|FBtr0083020|FBtr0333277|FBtr0083019 14724758|14724758|14724758|14724758 14725158|14725158|14725158|14725158 3R - 14725030 14725160 stop_codon CG7530 FlyBase G51234.2 AGAACTTGAAGATCCGAACATCTGAGTTAAGATCCGAAGATCCGAGGAGCGGAGATGGAATCCGGGACTCTAGTAGACTAAAGCTTAGTGTAAATAGTTTATGGGGCGCTCTTTATCCGCTAATAACTAAT 72 14725089 0.853455756 12 68 342 0.962025316 1.880813592 0.455696203 0.097222222 0.17721519 72 3 0 76 3R:14725030-14725160 6 CG7530 FBtr0333277|FBtr0083019|FBtr0083021|FBtr0083020 14724758|14724758|14724758|14724758 14725158|14725158|14725158|14725158 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R - 14725000 14725125 3'utr CG7530 FlyBase G38711.1 GAAGATCCGAGGAGCGGAGATGGAATCCGGGACTCTAGTAGACTAAAGCTTAGTGTAAATAGTTTATGGGGCGCTCTTTATCCGCTAATAACTAATATTTAGTTGTAGTTGTTGACCGATATGATT 49 14725088 0.970372793 10 41 236 0.855072464 1.293730757 0.47826087 0.367346939 0.550724638 49 8 2 59 3R:14725000-14725125 6 43.5 3702 FBgn0038256 709.2933333 50.04333333 76.62666667 0.061328646 0.869246653 0.567687489 -3 -4 -3.5 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 3R 14732766 14732771 - 3R_14732766_14732771_- 1 1 1 0 eff FBtr0336876|FBtr0083018|FBtr0310554 14732412|14732703|14732703 14733494|14733494|14733494 3R - 14732738 14732795 3'utr eff FlyBase G51245.1 AAAACTACAAATAAAAATCAGCTGGAAAAATTATTATTATTATTATTATATTATATTT 16 14732778 0.963372229 4 14 102 0.894736842 1.230448921 0 0.1875 0.315789474 16 2 0 17 3R:14732738-14732795 6 eff FBtr0083018|FBtr0310554|FBtr0336876 14732703|14732703|14732412 14733494|14733494|14733494 GAAAAA 6mer3-8 dme-miR-980-5p 3R - 14732754 14732854 3'utr eff FlyBase G38719.1 AAAGCTAGACAGCTACCAACAACAGCATCAACATAATAAGTTTAAATACAAAGAAAAACAAAACTACAAATAAAAATCAGCTGGAAAAATTATTATTATTA 10 14732778 0.929790846 6 9 38 1 1.113943352 0 0.2 0.384615385 10 0 0 13 3R:14732754-14732854 6 10 3703 FBgn0011217 11311.32 849.8066667 1308.386667 0.00088407 0.011767382 0.007643001 7 7 7 0.01 dme-miR-12-5p 6mer3-8 AATACT 3R 14791303 14791308 + 3R_14791303_14791308_+ 1 1 1 0 jvl FBtr0305694 14791293 14793735 3R + 14791277 14791328 stop_codon jvl FlyBase G42820.1 TTGGGTTGGTTCAAGTGAATTATTATAATACTACTGATAATACCGATACATA 16 14791296 0.796692403 3 14 121 0.909090909 1.301029996 0 0.1875 0.409090909 16 2 0 20 3R:14791277-14791328 6 jvl FBtr0305694 14791293 14793735 AATACT 6mer3-8 dme-miR-12-5p 3R + 14791277 14791304 stop_codon jvl FlyBase G32354.1 TTGGGTTGGTTCAAGTGAATTATTATAA 10 14791296 0.77833432 2 10 79 1 1.176091259 0 0.4 0.6 10 0 0 15 3R:14791277-14791304 2 4 3704 FBgn0263929 908.0433333 17.64333333 26.93 0.004405076 0.226714529 0.148533234 7 7 7 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3R 14791755 14791760 + 3R_14791755_14791760_+ 1 1 1 0 jvl FBtr0305694 14791293 14793735 3R + 14791741 14791773 3'utr jvl FlyBase G42822.1 AATTTAACAATGACTGTGTTGCCAATAGGAGTA 12 14791759 0.649346572 4 11 77 0.928571429 0.812913357 0.142857143 0.166666667 0.285714286 12 0 1 13 3R:14791741-14791773 6 jvl FBtr0305694 14791293 14793735 TGTGTT 6mer3-8 dme-miR-317-3p 3R + 14791741 14791772 3'utr jvl FlyBase G32355.1 AATTTAACAATGACTGTGTTGCCAATAGGAGT 12 14791758 0.667274197 5 11 74 0.941176471 1.204119983 0.176470588 0.25 0.470588235 12 1 0 16 3R:14791741-14791772 6 12 3705 FBgn0263929 908.0433333 17.64333333 26.93 0.013215228 0.680143586 0.445599703 -4 -3 -3.5 0.01 dme-miR-34-5p 7mer-m8 CACTGCC 3R 14792248 14792254 + 3R_14792248_14792254_+ 0.708953382 0.708953382 0.708953382 0 jvl FBtr0305694 14791293 14793735 3R + 14792179 14792271 3'utr jvl FlyBase G42823.1 TGCTATTGCTTTGGGTTTGGGTCGTTGACTCAACACTTGGCTAGTGAAAGGTGCATCCTATCAAACTCTCACTGCCTATCGATGCCTTAGGTG 15 14792247 0.973657867 6 15 94 1 1.255272505 0.277777778 0.2 0.333333333 15 0 0 18 3R:14792179-14792271 7 jvl FBtr0305694 14791293 14793735 CACTGCC 7mer-m8 dme-miR-34-5p 3R + 14792233 14792258 3'utr jvl FlyBase G32356.1 ATCCTATCAAACTCTCACTGCCTATC 5 14792247 0.746062544 2 5 27 1 0.903089987 0 0.6 0.75 5 0 0 8 3R:14792233-14792258 7 6 3706 FBgn0263929 908.0433333 17.64333333 26.93 0.006607614 0.340071793 0.222799851 1 1 1 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 14792541 14792547 + 3R_14792541_14792547_+ 0.661615645 0.661615645 0.661615645 0 jvl FBtr0305694 14791293 14793735 3R + 14792516 14792577 3'utr jvl FlyBase G42824.1 ATTGTTGGATCAGCCAGTTTCTCATTGTGTTCGAAAGTGAGTTTAAGCATAATTATTAGTTT 472 14792540 0.752758835 9 463 4416 0.980802792 2.272615061 0.422338569 0.167372881 0.314136126 472 9 2 562 3R:14792516-14792577 7 jvl FBtr0305694 14791293 14793735 TGTGTTC 7mer-m8 dme-miR-317-3p 3R + 14792515 14792563 3'utr jvl FlyBase G32357.1 CATTGTTGGATCAGCCAGTTTCTCATTGTGTTCGAAAGTGAGTTTAAGC 270 14792540 0.745441033 9 267 2446 0.990384615 2.31386722 0.408653846 0.374074074 0.59375 270 3 1 412 3R:14792515-14792563 7 367 3707 FBgn0263929 908.0433333 17.64333333 26.93 0.404165734 20.801058 13.62792425 1 1 1 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 3R 14793554 14793559 + 3R_14793554_14793559_+ 1 1 1 0 jvl FBtr0305690|FBtr0305694|FBtr0305693 14793489|14791293|14793489 14795868|14793735|14795868 3R + 14793523 14793613 3'utr jvl FlyBase G42826.1 CCATATTCGTGGACTAAAGGTGGTGTACTGATTGACTGATTGATTGACGTGTTGGTGGTGAATACATATATTTCGACTGCATGCCAAAAAT 22 14793554 0.985002362 8 22 178 1 1.414973348 0.538461538 0.181818182 0.307692308 22 0 0 26 3R:14793523-14793613 6 jvl FBtr0305691|FBtr0305689|FBtr0305694|FBtr0305690|FBtr0305693 14793489|14793489|14791293|14793489|14793489 14793607|14793607|14793735|14795868|14795868 TTGACT 6mer3-8 dme-miR-1012-3p 3R + 14793531 14793571 3'utr jvl FlyBase G32359.1 GTGGACTAAAGGTGGTGTACTGATTGACTGATTGATTGACG 12 14793554 0.953379137 4 12 99 1 1.255272505 0.5 0.416666667 0.611111111 12 0 0 18 3R:14793531-14793571 6 14 3708 FBgn0263929 908.0433333 17.64333333 26.93 0.015417766 0.79350085 0.51986632 0 0 0 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 14795186 14795191 + 3R_14795186_14795191_+ 1 1 1 0 jvl FBtr0305690|FBtr0305692|FBtr0305693|FBtr0305695 14793489|14795061|14793489|14795061 14795868|14795868|14795868|14795868 3R + 14795156 14795202 3'utr jvl FlyBase G42827.1 TCGAAAGAAAATGGATAAATATGTGTATGTAGCTGTAGTTTAGTGTT 5 14795185 0.992802336 3 5 44 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:14795156-14795202 6 jvl FBtr0305692|FBtr0305690|FBtr0305693|FBtr0305695 14795061|14793489|14793489|14795061 14795868|14795868|14795868|14795868 AGCTGT 6mer3-8 dme-miR-1008-3p 3R + 14795164 14795229 3'utr jvl FlyBase G32362.1 AAATGGATAAATATGTGTATGTAGCTGTAGTTTAGTGTTACGTGATGTGTATAATGTTGATTTAAA 8 14795183 0.980036023 4 7 81 0.9 0.954242509 0.3 0.25 0.4 8 1 0 9 3R:14795164-14795229 6 4.5 3709 FBgn0263929 908.0433333 17.64333333 26.93 0.004955711 0.255053845 0.167099889 1 3 2 0.01 dme-miR-932-5p 6mer2-7 GAATTG 3R 14795283 14795288 + 3R_14795283_14795288_+ 1 1 1 0 jvl FBtr0305690|FBtr0305692|FBtr0305693|FBtr0305695 14793489|14795061|14793489|14795061 14795868|14795868|14795868|14795868 3R + 14795259 14795312 3'utr jvl FlyBase G42828.1 GAAATTATCGATTGTAACTGAAATGAATTGTGACTGAATTGTATTGAACGTAAT 105 14795287 0.753381814 8 101 787 0.939849624 1.619788758 0.436090226 0.219047619 0.383458647 105 6 2 125 3R:14795259-14795312 6 jvl FBtr0305692|FBtr0305690|FBtr0305693|FBtr0305695 14795061|14793489|14793489|14795061 14795868|14795868|14795868|14795868 GAATTG 6mer2-7 dme-miR-932-5p 3R + 14795267 14795311 3'utr jvl FlyBase G32363.1 CGATTGTAACTGAAATGAATTGTGACTGAATTGTATTGAACGTAA 50 14795287 0.743368617 7 50 356 1 1.986771734 0.515463918 0.64 0.81443299 50 0 0 97 3R:14795267-14795311 6 76.5 3710 FBgn0263929 908.0433333 17.64333333 26.93 0.084247081 4.33591536 2.840698106 -4 -4 -4 0.01 dme-miR-980-3p 6mer3-8 GGCAGC 3R 14795772 14795777 + 3R_14795772_14795777_+ 1 1 1 0 jvl FBtr0305690|FBtr0305692|FBtr0305693|FBtr0305695 14793489|14795061|14793489|14795061 14795868|14795868|14795868|14795868 3R + 14795744 14795789 3'utr jvl FlyBase G42830.1 ATTAAAGCTAATAATAATATATTCAAAAGGCAGCAAATGTAGACAT 10 14795781 0.954960034 3 10 50 1 1 0.4 0 0 10 0 0 10 3R:14795744-14795789 6 jvl FBtr0305692|FBtr0305690|FBtr0305693|FBtr0305695 14795061|14793489|14793489|14795061 14795868|14795868|14795868|14795868 GGCAGC 6mer3-8 dme-miR-980-3p 3R + 14795748 14795787 3'utr jvl FlyBase G32364.1 AAGCTAATAATAATATATTCAAAAGGCAGCAAATGTAGAC 7 14795781 0.947960656 2 6 26 0.769230769 1 0.153846154 0.571428571 0.769230769 7 3 0 10 3R:14795748-14795787 6 8 3711 FBgn0263929 908.0433333 17.64333333 26.93 0.008810152 0.453429057 0.297066469 -9 -9 -9 0.01 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 14800967 14800974 + 3R_14800967_14800974_+ 0.625364269 0.625347421 0.625355845 1.20E-05 CG14856 FBtr0082992 14800923 14801163 3R + 14800945 14800990 3'utr CG14856 FlyBase G42831.1 AGGAAGGATTGTAGCTGCCTATTGCATTTAATTGTGTTCATAATAA 19 14800966 0.77986793 3 19 177 1 1.361727836 0.217391304 0.210526316 0.347826087 19 0 0 23 3R:14800945-14800990 8 CG14856 FBtr0082992 14800923 14801163 TGCATTTA 8mer-A1 dme-miR-277-3p 3R + 14800944 14800988 3'utr CG14856 FlyBase G32365.1 AAGGAAGGATTGTAGCTGCCTATTGCATTTAATTGTGTTCATAAT 9 14800976 0.990921824 3 9 98 1 1.146128036 0 0.333333333 0.571428571 9 0 0 14 3R:14800944-14800988 8 14 3712 FBgn0038261 0 0 0 Inf Inf Inf 1 -9 -4 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3R 14889144 14889149 - 3R_14889144_14889149_- 1 1 1 0 CycC FBtr0083010 14889002 14889193 3R - 14889100 14889182 3'utr CycC FlyBase G51267.1 AATCATTCATCATTAGCTGGTATTGCCCAATTGTGTGTTTGTACTCATATTACCAATGTATTTATGCCAATTAAACGAAAGTT 16 14889152 0.937424872 9 14 149 0.904761905 0.801632346 0.095238095 0.1875 0.380952381 16 0 2 19 3R:14889100-14889182 6 CycC FBtr0083010 14889002 14889193 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 14889096 14889170 3'utr CycC FlyBase G38736.1 TTAGCTGGTATTGCCCAATTGTGTGTTTGTACTCATATTACCAATGTATTTATGCCAATTAAACGAAAGTTTAAG 15 14889152 0.990981206 6 15 155 1 1.278753601 0.210526316 0.266666667 0.421052632 15 0 0 19 3R:14889096-14889170 6 10 3713 FBgn0004597 134.3233333 14.61666667 22.44333333 0.074447229 0.684150513 0.445566612 3 3 3 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 3R 14896416 14896422 + 3R_14896416_14896422_+ 0.823349562 0.823349562 0.823349562 0 CG14860 FBtr0289976 14895685 14896446 3R + 14896374 14896437 3'utr CG14860 FlyBase G42849.1 ACTGGCGGAAGAGTCCACTAAAAACACAAGAGACTAGACTTTAGACTGACTGAATAAATGTAAC 25 14896414 0.964034274 6 25 129 1 1.431363764 0.259259259 0.08 0.148148148 25 0 0 27 3R:14896374-14896437 7 CG14860 FBtr0289976 14895685 14896446 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 14896391 14896437 3'utr CG14860 FlyBase G32381.1 CTAAAAACACAAGAGACTAGACTTTAGACTGACTGAATAAATGTAAC 19 14896414 0.959361002 5 19 95 1 1.491361694 0.096774194 0.526315789 0.709677419 19 0 0 31 3R:14896391-14896437 7 21.5 3714 FBgn0038273 26.21 2.003333333 3.093333333 0.820297596 10.73211314 6.950431034 2 2 2 0.01 dme-miR-980-3p 6mer3-8 GGCAGC 3R 14902401 14902406 - 3R_14902401_14902406_- 1 1 1 0 VhaPPA1-1 FBtr0083005|FBtr0308030 14902328|14902328 14903233|14903233 3R - 14902342 14902422 3'utr VhaPPA1-1 FlyBase G51287.1 TCAAGCTACTGTTTGAGGCAGCAGTTGTAGATGGTTGCACAGTCGCATTATTATTATTATAGAAAGTATTCCATATTAAAA 20 14902409 0.992721159 7 14 166 0.782608696 1.255272505 0.304347826 0.1 0.217391304 20 5 0 18 3R:14902342-14902422 6 VhaPPA1-1 FBtr0308030|FBtr0083005 14902328|14902328 14903233|14903233 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 14902318 14902455 3'utr VhaPPA1-1 FlyBase G38747.1 ATTTACTACCGCAAAACGATAAACTTGTATATTTCAAGCTACTGTTTGAGGCAGCAGTTGTAGATGGTTGCACAGTCGCATTATTATTATTATAGAAAGTATTCCATATTAAAACAAATAAAATATATACGTTTTGTT 25 14902410 0.986804833 14 24 203 0.96969697 1.505149978 0.212121212 0.28 0.454545455 25 1 0 32 3R:14902318-14902455 6 11.5 3715 FBgn0028662 780.9733333 70.53333333 107.34 0.014725215 0.163043478 0.107136203 3 4 3.5 0.01 dme-miR-965-3p 6mer3-8 TACGCT 3R 14902488 14902493 - 3R_14902488_14902493_- 1 1 1 0 VhaPPA1-1 FBtr0083005|FBtr0308030 14902328|14902328 14903233|14903233 3R - 14902444 14902495 3'utr VhaPPA1-1 FlyBase G51288.1 TCTACGCTGGCTCTTCAAAGGCTAATTTAAAATGTATTATATTTACTACCGC 8 14902482 0.984596027 4 7 55 0.833333333 1 0.5 0.5 0.666666667 8 2 0 10 3R:14902444-14902495 6 VhaPPA1-1 FBtr0308030|FBtr0083005 14902328|14902328 14903233|14903233 TACGCT 6mer3-8 dme-miR-965-3p 3R - 14902466 14902500 3'utr VhaPPA1-1 FlyBase G38748.1 TTGTTTCTACGCTGGCTCTTCAAAGGCTAATTTAA 7 14902483 0.640745523 6 7 52 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 3R:14902466-14902500 6 6.5 3716 FBgn0028662 780.9733333 70.53333333 107.34 0.008322947 0.092155009 0.060555245 -11 -10 -10.5 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3R 14902524 14902529 - 3R_14902524_14902529_- 1 1 1 0 VhaPPA1-1 FBtr0083005|FBtr0308030 14902328|14902328 14903233|14903233 3R - 14902508 14902626 3'utr VhaPPA1-1 FlyBase G51289.1 ATCACTCAATCGACTGTGGAGTGTGCACGGTGTGAAAACGACCGTGATTTGTTTATTTCATTTCTTTGCCAAACGAAAGACATCGTGTGTGTGTGTCTGTGTTTGATTTTAAGCAGTTT 34 14902533 0.949568744 16 32 274 0.947368421 1.556302501 0.184210526 0.117647059 0.210526316 34 2 0 36 3R:14902508-14902626 6 VhaPPA1-1 FBtr0308030|FBtr0083005 14902328|14902328 14903233|14903233 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 14902510 14902550 3'utr VhaPPA1-1 FlyBase G38749.1 AAGACATCGTGTGTGTGTGTCTGTGTTTGATTTTAAGCAGT 7 14902533 0.847637649 5 7 79 1 1.079181246 0 0.285714286 0.583333333 7 0 0 12 3R:14902510-14902550 6 9 3717 FBgn0028662 780.9733333 70.53333333 107.34 0.011524081 0.127599244 0.083845724 4 4 4 0.01 dme-miR-965-3p 6mer2-7 ACGCTT 3R 14902713 14902718 - 3R_14902713_14902718_- 1 1 1 0 VhaPPA1-1 FBtr0083005|FBtr0308030 14902328|14902328 14903233|14903233 3R - 14902631 14902791 3'utr VhaPPA1-1 FlyBase G51290.1 GGAAATTACGACTCGCTATACGCAGTTACTGCTTGCAGGAGACGCCCGACAAACCGAAATCCGATCAGCCGTAACGCTTTAAACTAGGACTTAGTTACTCATTAAGATGATAGTTGGTTAAGTTGGCAGTTGGTTTTCACGCCTCGCACGCTCGCAGTCAC 128 14902712 0.858986765 26 119 899 0.935064935 1.681241237 0.155844156 0.1640625 0.305194805 128 8 2 144 3R:14902631-14902791 6 VhaPPA1-1 FBtr0308030|FBtr0083005 14902328|14902328 14903233|14903233 ACGCTT 6mer2-7 dme-miR-965-3p 3R - 14902667 14902793 3'utr VhaPPA1-1 FlyBase G38752.1 TTGGAAATTACGACTCGCTATACGCAGTTACTGCTTGCAGGAGACGCCCGACAAACCGAAATCCGATCAGCCGTAACGCTTTAAACTAGGACTTAGTTACTCATTAAGATGATAGTTGGTTAAGTTG 65 14902720 0.931094502 21 61 433 0.913043478 1.62324929 0.195652174 0.323076923 0.52173913 65 7 1 84 3R:14902667-14902793 6 59 3718 FBgn0028662 780.9733333 70.53333333 107.34 0.075546754 0.836483932 0.549655301 -6 2 -2 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 15079704 15079710 - 3R_15079704_15079710_- 0.661615645 0.661615645 0.661615645 0 CG6966 FBtr0344380 15079318 15081197 3R - 15079689 15079732 3'utr CG6966 FlyBase G51299.1 TGTGCATGTGTCTAGCCACCAATGTGTTCTGAAATGCAATTCGA 87 15079710 0.808859472 10 58 715 0.684210526 1.034762106 0.336842105 0.08045977 0.157894737 87 25 5 65 3R:15079689-15079732 7 CG6966 FBtr0344380 15079318 15081197 TGTGTTC 7mer-m8 dme-miR-317-3p 3R - 15079682 15079733 3'utr CG6966 FlyBase G38756.1 ATGTGCATGTGTCTAGCCACCAATGTGTTCTGAAATGCAATTCGATGTGCAT 66 15079709 0.820935604 11 39 543 0.59223301 1.086359831 0.466019417 0.424242424 0.631067961 66 38 4 61 3R:15079682-15079733 7 75.5 3719 FBgn0038286 1338.856667 38.3 58.94666667 0.056391399 1.971279373 1.280818819 0 -1 -0.5 0.01 dme-miR-31a-5p 6mer3-8 TCTTGC 3R 15080749 15080754 - 3R_15080749_15080754_- 0.999997729 1 0.999998865 1.63E-06 CG6966 FBtr0344380|FBtr0113236 15079318|15080451 15081197|15081197 3R - 15080602 15080782 3'utr CG6966 FlyBase G51302.1 ATGTTTTGAAACTTTCTTTAATATGTGTTCTTGCTACAACATTTTGTATGACTTATCATTAATAGAATATTGTATGTACTTGTACTATATGACCAAAAGCCTGGGCGTGATTGAGCAGCTTAATTTTAATTATCCTGGCATCAAGCCGACTCCTCAACGCTGCAGCAATCACGCCCAAGCC 80 15080752 0.900498151 22 76 655 0.950980392 1.685741739 0.019607843 0.2125 0.382352941 80 4 1 97 3R:15080602-15080782 6 CG6966 FBtr0344380|FBtr0113236 15079318|15080451 15081197|15081197 TCTTGC 6mer3-8 dme-miR-31a-5p 3R - 15080662 15080783 3'utr CG6966 FlyBase G38759.1 AATGTTTTGAAACTTTCTTTAATATGTGTTCTTGCTACAACATTTTGTATGACTTATCATTAATAGAATATTGTATGTACTTGTACTATATGACCAAAAGCCTGGGCGTGATTGAGCAGCTT 50 15080752 0.876621769 18 49 466 0.971428571 1.832508913 0.071428571 0.34 0.528571429 50 2 0 68 3R:15080662-15080783 6 25.5 3720 FBgn0038286 1338.856667 38.3 58.94666667 0.019046102 0.665796345 0.432594436 -2 -2 -2 0.01 dme-miR-11-3p 7mer-m1 TGTGATG 3R 15080947 15080953 - 3R_15080947_15080953_- 0.612071121 0.612071121 0.612071121 0 CG6966 FBtr0344380|FBtr0113236 15079318|15080451 15081197|15081197 3R - 15080893 15081078 3'utr CG6966 FlyBase G51303.1 TATCTAATACTACTATGACTACCGTCTATTTACTGTATAATTAGAGATGGAGAGAGAGTTCGAAACTATGCTGAATGATGAATGATGATATGGACGAGATCGTTACTAACGACTGGAAACTGATTTGTGATGTTAGCAAGCGAAGTGCCTGAATCGACGGATCAGGACGATAACTACTACAACTGA 783 15080955 0.979421794 36 718 4953 0.92513369 1.895623422 0.28342246 0.153256705 0.290909091 783 60 10 865 3R:15080893-15081078 7 CG6966 FBtr0344380|FBtr0113236 15079318|15080451 15081197|15081197 TGTGATG 7mer-m1 dme-miR-11-3p 3R - 15080891 15081048 3'utr CG6966 FlyBase G38760.1 TACTGTATAATTAGAGATGGAGAGAGAGTTCGAAACTATGCTGAATGATGAATGATGATATGGACGAGATCGTTACTAACGACTGGAAACTGATTTGTGATGTTAGCAAGCGAAGTGCCTGAATCGACGGATCAGGACGATAACTACTACAACTGACA 541 15080955 0.976444114 29 503 3251 0.931456548 2.103233406 0.298653611 0.390018484 0.596083231 541 51 5 761 3R:15080891-15081048 7 283.5 3721 FBgn0038286 1338.856667 38.3 58.94666667 0.211747835 7.402088773 4.809432255 2 2 2 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 15096529 15096535 - 3R_15096529_15096535_- 0.801970437 0.801970437 0.801970437 0 CG42788 FBtr0303485|FBtr0303485|FBtr0303485|FBtr0303486|FBtr0303486|FBtr0303486 15095955|15095955|15095955|15095955|15095955|15095955 15097627|15097627|15097627|15097627|15097627|15097627 3R - 15096512 15096551 3'utr CG42788 FlyBase G51320.1 AATCAAAATTTTAACTTGTGATATAAAAAAATGGAAAAAG 23 15096536 0.986396303 4 22 191 0.962962963 1.113943352 0 0.173913043 0.296296296 23 0 1 26 3R:15096512-15096551 7 CG42788 FBtr0303486|FBtr0303486|FBtr0303486|FBtr0303485|FBtr0303485|FBtr0303485 15095955|15095955|15095955|15095955|15095955|15095955 15097627|15097627|15097627|15097627|15097627|15097627 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 15096516 15096554 3'utr CG42788 FlyBase G38768.1 AATAATCAAAATTTTAACTTGTGATATAAAAAAATGGAA 21 15096537 0.664596539 6 20 179 0.96875 1.190331698 0 0.333333333 0.5625 21 0 1 31 3R:15096516-15096554 7 22 3722 FBgn0261859 601.7 10.87666667 16.7 0.036563071 2.022678517 1.317365269 1 2 1.5 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 3R 15097299 15097304 - 3R_15097299_15097304_- 1 1 1 0 CG42788 FBtr0303485|FBtr0303486 15095955|15095955 15097627|15097627 3R - 15097278 15097318 3'utr CG42788 FlyBase G51322.1 ATATCGAAACTGGAATGTGACAGCTCATAGGAAGACATCTT 20 15097301 0.904477643 4 20 85 1 1.361727836 0.304347826 0.15 0.260869565 20 0 0 23 3R:15097278-15097318 6 CG42788 FBtr0303486|FBtr0303485 15095955|15095955 15097627|15097627 ATGTGA 6mer3-8 dme-miR-1003-3p 3R - 15097261 15097316 3'utr CG42788 FlyBase G38770.1 ATCGAAACTGGAATGTGACAGCTCATAGGAAGACATCTTAGTCGATGTGGTGGAGT 12 15097301 0.915770827 4 11 51 0.916666667 1.342422681 0.333333333 0.666666667 0.833333333 12 2 0 22 3R:15097261-15097316 6 15 3723 FBgn0261859 601.7 10.87666667 16.7 0.024929367 1.379098989 0.898203593 -3 -3 -3 0.01 dme-miR-276a-3p 6mer3-8 AGTTCC 3R 15142118 15142123 - 3R_15142118_15142123_- 0.999815542 1 0.999907771 0.000130461 GlyS FBtr0083036|FBtr0333276|FBtr0083037|FBtr0083035 15141841|15141841|15141841|15141841 15142202|15142202|15142202|15142202 3R - 15142010 15142208 stop_codon GlyS FlyBase G51343.1 AAGTAGAGTTCTCTGCCAAATGGAAGGCCCTTATATTTGTAGCGAACAAACCAATTAAAATCAACACACGCGCAATATTACCATAAGTTCCAGTTGTCTTGTTCCACCAATGTTCATCGAGATACGGGCTAAACTCTTGCCCGGATGCCTTCGAAACTATCTACCTGCAATTGAAATGCCAGAACAAATGTTTTCACAT 61 15142130 0.972931653 25 60 362 1 1.857332496 0.208333333 0.163934426 0.291666667 61 0 0 72 3R:15142010-15142208 6 GlyS FBtr0083036|FBtr0333276|FBtr0083037|FBtr0083035 15141841|15141841|15141841|15141841 15142202|15142202|15142202|15142202 AGTTCC 6mer3-8 dme-miR-276a-3p 3R - 15141999 15142143 3'utr GlyS FlyBase G38787.1 ACACGCGCAATATTACCATAAGTTCCAGTTGTCTTGTTCCACCAATGTTCATCGAGATACGGGCTAAACTCTTGCCCGGATGCCTTCGAAACTATCTACCTGCAATTGAAATGCCAGAACAAATGTTTTCACATCTAATCAAATT 26 15142113 0.970570554 12 25 150 1 1.62324929 0.142857143 0.4 0.642857143 25 0 0 42 3R:15141999-15142143 6 8 3724 FBgn0266064 998.7833333 45.89333333 69.61333333 0.008009745 0.174317257 0.114920513 7 -10 -1.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 15191257 15191264 - 3R_15191257_15191264_- 0.63113665 0.63113665 0.63113665 0 CG6752 FBtr0306246|FBtr0083029 15191056|15191056 15191305|15191305 3R - 15191236 15191306 stop_codon CG6752 FlyBase G51359.1 AGGAAAAACCCACCGATAGCAATCAAGGAAAGCCCAACCAAATCTAGTCAAACTCCTATGCTTTAAGTGTA 25 15191264 0.943774718 7 22 90 0.888888889 1.079181246 0.222222222 0.08 0.148148148 25 2 1 24 3R:15191236-15191306 8 CG6752 FBtr0306246|FBtr0083029 15191056|15191056 15191305|15191305 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R - 15191236 15191336 stop_codon CG6752 FlyBase G38807.1 AGTCCAGACGCCAATGATCGAGCGGGCCTAAGGAAAAACCCACCGATAGCAATCAAGGAAAGCCCAACCAAATCTAGTCAAACTCCTATGCTTTAAGTGTA 12 15191264 0.936155972 5 9 38 0.888888889 0.903089987 0.166666667 0.5 0.666666667 12 1 1 16 3R:15191236-15191336 8 12.5 3725 FBgn0038296 195.79 5.47 8.353333333 0.063843914 2.285191956 1.496408619 0 0 0 0.01 dme-miR-2b-2-5p 6mer2-7 TGAAGA 3R 15202499 15202504 + 3R_15202499_15202504_+ 1 1 1 0 CG42542 FBtr0301101|FBtr0301104|FBtr0301102|FBtr0302325|FBtr0301103|FBtr0302324 15202444|15202444|15202444|15202444|15202444|15202444 15202977|15202977|15202977|15202973|15202977|15203074 3R + 15202418 15202532 stop_codon CG42542 FlyBase G42871.2 TGTCGCCATACCTCCGGATGACATTTAGGCGAAGCCTTTATACTCCAATCGAGATTGCCCGCTGACGACCCCACAATATTATGAAGATTTAGTTTTAGTTACTACCTGATAAACC 44 15202494 0.973875865 12 37 191 0.945454545 1.716003344 0.036363636 0.159090909 0.327272727 44 3 0 52 3R:15202418-15202532 6 CG42542 FBtr0302325|FBtr0301102|FBtr0301104|FBtr0301101|FBtr0302324|FBtr0301103 15202444|15202444|15202444|15202444|15202444|15202444 15202973|15202977|15202977|15202977|15203074|15202977 TGAAGA 6mer2-7 dme-miR-2b-2-5p 3R + 15202457 15202525 3'utr CG42542 FlyBase G32396.1 ATACTCCAATCGAGATTGCCCGCTGACGACCCCACAATATTATGAAGATTTAGTTTTAGTTACTACCTG 28 15202473 0.751312822 8 25 118 0.930232558 1.301029996 0.046511628 0.321428571 0.558139535 28 2 1 40 3R:15202457-15202525 6 9.5 3726 FBgn0260659 161.8666667 9.733333333 14.87666667 0.05869028 0.976027397 0.638583912 5 26 15.5 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3R 15202886 15202892 + 3R_15202886_15202892_+ 0.808818836 0.808818836 0.808818836 0 CG42542 FBtr0301101|FBtr0301101|FBtr0301104|FBtr0301104|FBtr0301102|FBtr0301102|FBtr0302325|FBtr0302325|FBtr0301103|FBtr0301103|FBtr0302324|FBtr0302324 15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444 15202977|15202977|15202977|15202977|15202977|15202977|15202973|15202973|15202977|15202977|15203074|15203074 3R + 15202823 15202897 3'utr CG42542 FlyBase G42873.1 GAGTTGTATCCTTTCCTTCATAACGCAGATCCTTATTCGCATATTTGTTTACGTAGCCGTGTTTACTTAATGGAA 7 15202884 0.915389841 6 6 68 0.857142857 0.77815125 0 0 0 7 1 0 6 3R:15202823-15202897 7 CG42542 FBtr0302325|FBtr0302325|FBtr0301102|FBtr0301102|FBtr0301104|FBtr0301104|FBtr0301101|FBtr0301101|FBtr0302324|FBtr0302324|FBtr0301103|FBtr0301103 15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444 15202973|15202973|15202977|15202977|15202977|15202977|15202977|15202977|15203074|15203074|15202977|15202977 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3R + 15202869 15202902 3'utr CG42542 FlyBase G32398.1 GTTTACGTAGCCGTGTTTACTTAATGGAAACAAC 8 15202883 0.81190218 4 7 54 1 1.204119983 0.125 0.625 0.8125 8 0 0 16 3R:15202869-15202902 7 5 3727 FBgn0260659 161.8666667 9.733333333 14.87666667 0.030889621 0.51369863 0.336096796 2 3 2.5 0.01 dme-miR-317-5p 6mer3-8 GTATCC 3R 15222006 15222011 + 3R_15222006_15222011_+ 1 1 1 0 CG12241 FBtr0083051 15221954 15222371 3R + 15221998 15222062 3'utr CG12241 FlyBase G42897.1 TCAACTGCGTATCCAATATCTCATTGCCCCCTTCTCTGTTCTTTCATTTCTAAGTGCAATCGCAA 34 15222021 0.798221223 8 32 293 0.974358974 1.579783597 0.128205128 0.088235294 0.205128205 34 1 0 38 3R:15221998-15222062 6 CG12241 FBtr0083051 15221954 15222371 GTATCC 6mer3-8 dme-miR-317-5p 3R + 15222003 15222053 3'utr CG12241 FlyBase G32410.1 TGCGTATCCAATATCTCATTGCCCCCTTCTCTGTTCTTTCATTTCTAAGTG 23 15222021 0.775076631 9 23 197 1 1.568201724 0.189189189 0.391304348 0.621621622 23 0 0 37 3R:15222003-15222053 6 18.5 3728 FBgn0038304 479.84 19.50666667 29.96333333 0.038554518 0.948393712 0.617421293 -15 -15 -15 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 15222146 15222151 + 3R_15222146_15222151_+ 1 1 1 0 CG12241 FBtr0083051 15221954 15222371 3R + 15222121 15222226 3'utr CG12241 FlyBase G42898.1 TAAGTGCTTTACCATAACGATCTGTAGCTGTAACTATACCTTTAAAACGCCCTATGTATAGCTCGAGCCGTTTGTTTACTTAATGTCCATCCATTATTATAAATCC 31 15222144 0.791892975 16 28 255 0.885714286 1.491361694 0.085714286 0.129032258 0.228571429 31 4 0 31 3R:15222121-15222226 6 CG12241 FBtr0083051 15221954 15222371 AGCTGT 6mer3-8 dme-miR-1008-3p 3R + 15222104 15222217 3'utr CG12241 FlyBase G32411.1 TTGTCGTACACCTAACTTAAGTGCTTTACCATAACGATCTGTAGCTGTAACTATACCTTTAAAACGCCCTATGTATAGCTCGAGCCGTTTGTTTACTTAATGTCCATCCATTAT 24 15222146 0.98696807 14 21 188 0.857142857 1.477121255 0.114285714 0.291666667 0.514285714 24 5 0 30 3R:15222104-15222217 6 11.5 3729 FBgn0038304 479.84 19.50666667 29.96333333 0.023966322 0.589542037 0.383802425 2 0 1 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3R 15222197 15222203 + 3R_15222197_15222203_+ 0.808818836 0.808818836 0.808818836 0 CG12241 FBtr0083051|FBtr0083051 15221954|15221954 15222371|15222371 3R + 15222121 15222226 3'utr CG12241 FlyBase G42898.1 TAAGTGCTTTACCATAACGATCTGTAGCTGTAACTATACCTTTAAAACGCCCTATGTATAGCTCGAGCCGTTTGTTTACTTAATGTCCATCCATTATTATAAATCC 31 15222214 0.791892975 16 28 255 0.885714286 1.491361694 0.085714286 0.129032258 0.228571429 31 4 0 31 3R:15222121-15222226 7 CG12241 FBtr0083051|FBtr0083051 15221954|15221954 15222371|15222371 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3R + 15222104 15222217 3'utr CG12241 FlyBase G32411.1 TTGTCGTACACCTAACTTAAGTGCTTTACCATAACGATCTGTAGCTGTAACTATACCTTTAAAACGCCCTATGTATAGCTCGAGCCGTTTGTTTACTTAATGTCCATCCATTAT 24 15222193 0.98696807 14 21 188 0.857142857 1.477121255 0.114285714 0.291666667 0.514285714 24 5 0 30 3R:15222104-15222217 7 9.5 3730 FBgn0038304 479.84 19.50666667 29.96333333 0.019798266 0.487012987 0.317054177 -17 4 -6.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 15227375 15227380 + 3R_15227375_15227380_+ 1 1 1 0 Caf1 FBtr0083052|FBtr0301845 15227345|15227345 15227564|15227564 3R + 15227294 15227458 stop_codon Caf1 FlyBase G42911.1 ACGACGAGGAGCCAGAGATTCCCGCCTCCGAGTTAGAAACCAATACCGCTTAAAGCATCTGTTCCGCCTCCTATAATACACACCAAACTACAACTGAATCCGATAATGTTTTGGCCGTGCCCCGTGTCCAGCTATCCAGCCTAAATGGCAATGGGTACTCATTTT 73 15227404 0.972497702 19 70 418 0.962962963 1.414973348 0.148148148 0.109589041 0.197530864 73 1 2 78 3R:15227294-15227458 6 Caf1 FBtr0083052|FBtr0301845 15227345|15227345 15227564|15227564 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 15227372 15227435 3'utr Caf1 FlyBase G32423.1 CACACCAAACTACAACTGAATCCGATAATGTTTTGGCCGTGCCCCGTGTCCAGCTATCCAGCCT 26 15227404 0.756089276 11 25 171 0.957446809 1.176091259 0.276595745 0.5 0.723404255 26 0 2 45 3R:15227372-15227435 6 10.5 3731 FBgn0263979 1221 81.29 124.4766667 0.008599509 0.129167179 0.084353159 -29 -29 -29 0.01 dme-miR-317-3p 8mer-A1 TGTGTTCA 3R 15257050 15257057 + 3R_15257050_15257057_+ 0.631136783 0.631136783 0.631136783 0 CG42404 FBtr0305614|FBtr0345173 15255666|15252205 15257765|15257765 3R + 15257013 15257074 3'utr CG42404 FlyBase G42920.1 TTTTGGTTGTAATAGATCTCTGACCTGAAAACTGTATTGTGTTCAACGGATGCTCAAAAAAA 30 15257049 0.709878547 4 30 231 1 1.568201724 0.297297297 0.2 0.351351351 30 0 0 37 3R:15257013-15257074 8 CG42404 FBtr0345173|FBtr0305614 15252205|15255666 15257765|15257765 TGTGTTCA 8mer-A1 dme-miR-317-3p 3R + 15256994 15257071 3'utr CG42404 FlyBase G32430.1 AAAACGGTTCCTGTTCCGCTTTTGGTTGTAATAGATCTCTGACCTGAAAACTGTATTGTGTTCAACGGATGCTCAAAA 28 15257049 0.982652144 5 28 218 1 1.612783857 0.219512195 0.392857143 0.585365854 28 0 0 41 3R:15256994-15257071 8 21.5 3732 FBgn0259823 5.333333333 0.116666667 0.176666667 4.03125 184.2857143 121.6981132 1 1 1 0.01 dme-miR-980-3p 6mer3-8 GGCAGC 3R 15258305 15258310 - 3R_15258305_15258310_- 1 1 1 0 eIF-2gamma FBtr0337054|FBtr0310386|FBtr0310387 15257842|15257982|15257982 15258366|15258366|15258366 3R - 15258262 15258334 3'utr eIF-2gamma FlyBase G51437.2 AAGAACAACATCAGCGGCAAAAGTGGCAGCATCATCTTTATTAGGCCTCTTCACACTGCTCCTTCTTGTCCCA 37 15258311 0.960374812 11 36 146 1 1.602059991 0.125 0.054054054 0.125 37 0 0 40 3R:15258262-15258334 6 eIF-2gamma FBtr0310386|FBtr0337054|FBtr0310387 15257982|15257842|15257982 15258366|15258366|15258366 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 15258218 15258329 3'utr eIF-2gamma FlyBase G38860.1 CAACATCAGCGGCAAAAGTGGCAGCATCATCTTTATTAGGCCTCTTCACACTGCTCCTTCTTGTCCCACAGCTCCATTCTTCCCGTGTCCGTTGATCAAACCGAAACTAATT 28 15258311 0.966559253 12 27 143 0.973684211 1.267171728 0.078947368 0.321428571 0.5 28 0 1 37 3R:15258218-15258329 6 19.5 3733 FBgn0263740 1282.026667 78.22 119.4766667 0.015210292 0.249296855 0.163211785 1 1 1 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 15270283 15270289 + 3R_15270283_15270289_+ 0.658999527 0.658999527 0.658999527 0 Zip88E FBtr0290018 15270194 15270532 3R + 15270189 15270310 stop_codon Zip88E FlyBase G42935.1 GGATTAGACATCTTTTCGTTGAGAAATCGTTTCAGCGCTGTGAGAAAATGTGCCGCTTTTTAAACTTAGAACACTTAGGATAATATTATGGATTGGCAGCTGTTAATCTCTTGTGTAAGACT 91 15270282 0.836167379 17 84 783 0.912621359 1.371067862 0.126213592 0.098901099 0.203883495 91 6 3 94 3R:15270189-15270310 7 Zip88E FBtr0290018 15270194 15270532 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 15270184 15270321 stop_codon Zip88E FlyBase G32446.1 GATGAGGATTAGACATCTTTTCGTTGAGAAATCGTTTCAGCGCTGTGAGAAAATGTGCCGCTTTTTAAACTTAGAACACTTAGGATAATATTATGGATTGGCAGCTGTTAATCTCTTGTGTAAGACTTGTTACTTGTG 75 15270281 0.836996111 22 73 663 0.971962617 2.017033339 0.121495327 0.346666667 0.542056075 75 3 0 104 3R:15270184-15270321 7 51.5 3734 FBgn0038312 158.6266667 12.80333333 19.79 0.324661679 4.022390003 2.602324406 1 2 1.5 0.01 dme-miR-184-5p 6mer2-7 GATAAG 3R 15270368 15270373 + 3R_15270368_15270373_+ 1 1 1 0 Zip88E FBtr0290018 15270194 15270532 3R + 15270329 15270464 3'utr Zip88E FlyBase G42936.1 AACTAATCTTGTTTTAGGTACATTGTCGATCTGCCGTAGGATAAGTAAAAAGTTCAGTCTTCTCGTCTACATTTATATTTTCTCTTTCTCCAAAGTTTGTGTTATTTTTTATGCTTTTATTATATGTAATAAACCT 32 15270351 0.987003131 12 28 269 0.942857143 1.51851394 0.2 0.129032258 0.228571429 31 2 0 33 3R:15270329-15270464 6 Zip88E FBtr0290018 15270194 15270532 GATAAG 6mer2-7 dme-miR-184-5p 3R + 15270337 15270383 3'utr Zip88E FlyBase G32447.1 TTGTTTTAGGTACATTGTCGATCTGCCGTAGGATAAGTAAAAAGTTC 15 15270351 0.672447414 5 14 114 1 1.447158031 0.071428571 0.6 0.785714286 15 0 0 28 3R:15270337-15270383 6 14 3735 FBgn0038312 158.6266667 12.80333333 19.79 0.088257544 1.093465243 0.707427994 17 17 17 0.01 dme-miR-2b-2-5p 6mer2-7 TGAAGA 3R 15270928 15270933 - 3R_15270928_15270933_- 1 1 1 0 Cp190 FBtr0083127|FBtr0083126 15270430|15270430 15271042|15271042 3R - 15270863 15271020 3'utr Cp190 FlyBase G51457.1 AAGTTTGGCGATTCAACGCAGGTCAGCAGATAAACGCACCTGAGCTCGGCGCGAATTTTCGGTTTCTATTGTAAATTAAATTGTTAATGAAGATCAAGGTGAATGATAAGATATGCATATGCACTGGTTTAAGTGTATAAGATCTAATCTACTCATCT 82 15270933 0.858714814 25 82 444 1 1.995635195 0.050505051 0.146341463 0.292929293 82 0 0 99 3R:15270863-15271020 6 Cp190 FBtr0083126|FBtr0083127 15270430|15270430 15271042|15271042 TGAAGA 6mer2-7 dme-miR-2b-2-5p 3R - 15270884 15271006 3'utr Cp190 FlyBase G38876.1 AACGCAGGTCAGCAGATAAACGCACCTGAGCTCGGCGCGAATTTTCGGTTTCTATTGTAAATTAAATTGTTAATGAAGATCAAGGTGAATGATAAGATATGCATATGCACTGGTTTAAGTGTA 37 15270933 0.974210245 8 35 190 1 1.748188027 0.053571429 0.378378378 0.589285714 37 0 0 56 3R:15270884-15271006 6 34.5 3736 FBgn0000283 4864.516667 141.61 217.1233333 0.007092174 0.243626863 0.158895866 0 0 0 0.01 dme-miR-14-3p 6mer2-7 AGACTG 3R 15278194 15278199 - 3R_15278194_15278199_- 1 1 1 0 l(3)neo43 FBtr0334696|FBtr0301089 15277979|15278146 15278242|15278242 3R - 15278174 15278216 3'utr l(3)neo43 FlyBase G51490.1 AAACAACCCATAAAAACAGACTGTTTGATGTACATAGTCATAA 50 15278193 0.628001242 5 48 245 0.969230769 1.498310554 0 0.26 0.430769231 50 1 1 63 3R:15278174-15278216 6 l(3)neo43 FBtr0301089|FBtr0334696 15278146|15277979 15278242|15278242 AGACTG 6mer2-7 dme-miR-14-3p 3R - 15278173 15278218 3'utr l(3)neo43 FlyBase G38901.1 GAAAACAACCCATAAAAACAGACTGTTTGATGTACATAGTCATAAA 39 15278193 0.919394309 4 39 174 1 1.792391689 0.032258065 0.435897436 0.64516129 39 0 0 62 3R:15278173-15278218 6 44.5 3737 FBgn0011476 117.71 35.50666667 54.64333333 0.378047744 1.253285768 0.814371988 -6 -6 -6 0.01 dme-miR-1007-3p 7mer-A1 GAGCTTA 3R 15297102 15297108 + 3R_15297102_15297108_+ 0.823349562 0.823349562 0.823349562 0 Tm1 FBtr0089963|FBtr0089961|FBtr0089962 15296938|15296938|15296938 15297679|15297679|15297679 3R + 15297052 15297102 3'utr Tm1 FlyBase G42954.1 CAAAACTTGTGCTTACCACGACGATTACGAATGATGCTTGAGGGCAGTTAG 27 15297089 0.946340943 6 27 131 1 1.568201724 0.540540541 0.259259259 0.459459459 27 0 0 37 3R:15297052-15297102 1 Tm1 FBtr0089961|FBtr0089962|FBtr0089963 15296938|15296938|15296938 15297679|15297679|15297679 GAGCTTA 7mer-A1 dme-miR-1007-3p 3R + 15297053 15297107 3'utr Tm1 FlyBase G32461.1 AAAACTTGTGCTTACCACGACGATTACGAATGATGCTTGAGGGCAGTTAGAGCTT 21 15297089 0.842854015 6 21 100 1 1.397940009 0.44 0.19047619 0.32 21 0 0 25 3R:15297053-15297107 6 2.5 3738 FBgn0003721 5849.68 316.09 484.7266667 0.000427374 0.00790914 0.005157546 13 13 13 0.01 dme-miR-13b-2-5p 7mer-m8 TTTGACG 3R 15303763 15303769 + 3R_15303763_15303769_+ 0.659000274 0.374153603 0.516576938 0.201417033 Tm1 FBtr0089968|FBtr0089960 15303722|15303722 15304972|15304529 3R + 15303739 15303813 5'utr Tm1 FlyBase G42957.1 ATGTAAATTAACTAAACTGCCTGCTTTGACGTCAAACAAAAAACACCCACGCACACACAAAACTGGCGCTTTCCA 23 15303762 0.977300005 8 21 139 0.925925926 1.096910013 0.074074074 0.173913043 0.296296296 23 1 1 25 3R:15303739-15303813 7 Tm1 FBtr0089960|FBtr0089968 15303722|15303722 15304529|15304972 TTTGACG 7mer-m8 dme-miR-13b-2-5p 3R + 15303725 15303781 5'utr Tm1 FlyBase G32463.1 CAACTAATTTGCTTATGTAAATTAACTAAACTGCCTGCTTTGACGTCAAACAAAAAA 18 15303761 0.980455121 6 18 128 1 1.380211242 0.083333333 0.333333333 0.5 18 0 0 24 3R:15303725-15303781 7 17.5 3739 FBgn0003721 5849.68 316.09 484.7266667 0.002991617 0.055363979 0.036102821 1 2 1.5 0.01 dme-miR-980-3p 8mer-A1 GGCAGCTA 3R 15304166 15304173 + 3R_15304166_15304173_+ 0.668734347 0.668734347 0.668734347 0 Tm1 FBtr0089968|FBtr0089960 15303722|15303722 15304972|15304529 3R + 15304115 15304199 5'utr Tm1 FlyBase G42962.1 CGATTACGTCGATATTTTCGATACCATTTCGCAAAATTCGAACGGTTGACTGGCAGCTAGCGCCATTTTACTATACTGTTGCAAT 881 15304165 0.945565852 9 863 3587 0.977055449 2.106360909 0.078393881 0.157775255 0.290630975 881 17 7 1022 3R:15304115-15304199 8 Tm1 FBtr0089960|FBtr0089968 15303722|15303722 15304529|15304972 GGCAGCTA 8mer-A1 dme-miR-980-3p 3R + 15304102 15304187 5'utr Tm1 FlyBase G32465.2 ATTTCGATATTTTCGATTACGTCGATATTTTCGATACCATTTCGCAAAATTCGAACGGTTGACTGGCAGCTAGCGCCATTTTACTA 536 15304165 0.864957285 10 527 2046 0.984486874 2.615423953 0.076372315 0.391791045 0.61097852 536 12 1 825 3R:15304102-15304187 8 704 3740 FBgn0003721 5849.68 316.09 484.7266667 0.120348464 2.227213768 1.452364907 1 1 1 0.01 dme-miR-13b-2-5p 8mer-A1 TTTGACGA 3R 15304320 15304327 + 3R_15304320_15304327_+ 0.601218565 0.601218565 0.601218565 0 Tm1 FBtr0089968|FBtr0089960 15303722|15303722 15304972|15304529 3R + 15304295 15304372 5'utr Tm1 FlyBase G42963.1 TTATACTTGACCTTGTACTTTTGTATTTGACGAGATGACAACTTGGACAACACACGCATTGCCGCCTTCTTTTTAGTT 16 15304338 0.966073678 8 14 92 0.882352941 0.875061263 0.176470588 0.0625 0.117647059 16 1 1 15 3R:15304295-15304372 8 Tm1 FBtr0089960|FBtr0089968 15303722|15303722 15304529|15304972 TTTGACGA 8mer-A1 dme-miR-13b-2-5p 3R + 15304295 15304372 5'utr Tm1 FlyBase G32466.1 TTATACTTGACCTTGTACTTTTGTATTTGACGAGATGACAACTTGGACAACACACGCATTGCCGCCTTCTTTTTAGTT 10 15304338 0.971864204 6 9 62 0.923076923 1.079181246 0 0.2 0.384615385 10 1 0 12 3R:15304295-15304372 8 4.5 3741 FBgn0003721 5849.68 316.09 484.7266667 0.000769273 0.014236452 0.009283583 -18 -18 -18 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 15304848 15304853 + 3R_15304848_15304853_+ 1 1 1 0 Tm1 FBtr0089968 15303722 15304972 3R + 15304815 15304887 3'utr Tm1 FlyBase G42966.1 CTGCAACAAGAAATGGCATTAAAAATTCTAATTTGATCTATTTACGATTTACATAAATTAATTATTTATACTT 55 15304847 0.990927098 10 53 558 0.971014493 1.826074803 0.014492754 0.218181818 0.376811594 55 2 0 67 3R:15304815-15304887 6 Tm1 FBtr0089968 15303722 15304972 TGATCT 6mer3-8 dme-bantam-3p 3R + 15304772 15304888 3'utr Tm1 FlyBase G32470.1 TGATTCTGAATGCCGTGACACCCAAATGAAGATAAAACGAATGCTGCAACAAGAAATGGCATTAAAAATTCTAATTTGATCTATTTACGATTTACATAAATTAATTATTTATACTTT 44 15304847 0.988145618 12 41 379 0.953125 1.484299839 0.015625 0.363636364 0.5625 44 2 1 61 3R:15304772-15304888 6 41.5 3742 FBgn0003721 5849.68 316.09 484.7266667 0.007094405 0.131291721 0.085615261 1 1 1 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG 3R 15318315 15318320 - 3R_15318315_15318320_- 1 1 1 0 CG6276 FBtr0083123 15318201 15318439 3R - 15318263 15318338 3'utr CG6276 FlyBase G51492.1 AAGAATCCTTTAAGCTTCGCTGTGCAAGAACAAAGTATCCTTAAAAACGTTTTGAAAACTATCCGGTATGTTTATT 10 15318323 0.976179382 5 9 60 0.9 0.653212514 0 0 0 10 0 1 9 3R:15318263-15318338 6 CG6276 FBtr0083123 15318201 15318439 GCTGTG 6mer2-7 dme-miR-1008-3p 3R - 15318303 15318338 3'utr CG6276 FlyBase G38902.1 AAGAATCCTTTAAGCTTCGCTGTGCAAGAACAAAGT 7 15318323 0.958332996 3 7 37 1 1 0 0.285714286 0.5 7 0 0 10 3R:15318303-15318338 6 7.5 3743 FBgn0038316 98.66666667 6.676666667 10.25333333 0.076013514 1.123315027 0.731469441 3 3 3 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3R 15324537 15324542 + 3R_15324537_15324542_+ 1 1 1 0 ear FBtr0334695 15324283 15325279 3R + 15324504 15324562 3'utr ear FlyBase G42978.1 ATTGAAGTCGTCCTTTAGTTTTTGAGACTCATTTGTGTTAAGACTCGTTTCGTTTAAGA 203 15324526 0.738728478 16 197 2210 0.966527197 2.36361198 0.167364017 0.157635468 0.284518828 203 8 0 231 3R:15324504-15324562 6 ear FBtr0334695 15324283 15325279 TGTGTT 6mer3-8 dme-miR-317-3p 3R + 15324475 15324558 3'utr ear FlyBase G32479.1 AAGACCCAATCGATTTCGTTTTTCAAAATATTGAAGTCGTCCTTTAGTTTTTGAGACTCATTTGTGTTAAGACTCGTTTCGTTT 94 15324526 0.99162419 18 89 967 0.944444444 2.133538908 0.097222222 0.372340426 0.590277778 94 8 0 136 3R:15324475-15324558 6 137.5 3744 FBgn0026441 968.99 34.99666667 53.49 0.141900329 3.928945614 2.570573939 11 11 11 0.01 dme-miR-92b-3p 7mer-m1 TGCAATT 3R 15324580 15324586 + 3R_15324580_15324586_+ 0.765586663 0.765586663 0.765586663 0 ear FBtr0334695 15324283 15325279 3R + 15324580 15324616 3'utr ear FlyBase G42979.1 TGCAATTATACACTAACGCGACGATTTTAACGTTCTA 8 15324586 0.886065438 2 8 40 1 0.954242509 0.333333333 0.125 0.222222222 8 0 0 9 3R:15324580-15324616 6 ear FBtr0334695 15324283 15325279 TGCAATT 7mer-m1 dme-miR-92b-3p 3R + 15324583 15324627 3'utr ear FlyBase G32480.1 AATTATACACTAACGCGACGATTTTAACGTTCTACGCATTTGCTA 7 15324586 0.979053742 4 6 41 0.818181818 0.954242509 0 0.571428571 0.727272727 7 2 0 9 3R:15324583-15324627 3 7 3745 FBgn0026441 968.99 34.99666667 53.49 0.007224017 0.200019049 0.130865582 -6 -6 -6 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 15325437 15325443 - 3R_15325437_15325443_- 0.823349562 0.823349562 0.823349562 0 CG6236 FBtr0083122|FBtr0083121 15325323|15325323 15325538|15325538 3R - 15325418 15325501 3'utr CG6236 FlyBase G51496.1 GCTAAGCAATCAACTGGAATAGATTTCTGCACTGATTGTAGATTTTAGATTACTCCTTCCAAAGAATATTGTCACTGGCTCCTT 95 15325445 0.7932172 18 90 749 0.964285714 1.73239376 0.241071429 0.159574468 0.294642857 94 3 1 108 3R:15325418-15325501 7 CG6236 FBtr0083122|FBtr0083121 15325323|15325323 15325538|15325538 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 15325411 15325534 3'utr CG6236 FlyBase G38907.1 TGCACAAAATGACAAGTCCAAAACATAGAAACTGCTAAGCAATCAACTGGAATAGATTTCTGCACTGATTGTAGATTTTAGATTACTCCTTCCAAAGAATATTGTCACTGGCTCCTTAAGTTAA 68 15325445 0.987197544 19 61 526 0.913043478 1.447158031 0.119565217 0.235294118 0.434782609 68 6 2 84 3R:15325411-15325534 7 62 3746 FBgn0038318 770.0133333 38.62666667 58.75333333 0.080518086 1.605108733 1.055259276 2 2 2 0.01 dme-miR-995-5p 6mer3-8 AATTCG 3R 15337915 15337920 + 3R_15337915_15337920_+ 0.98379501 0.999999921 0.991897465 0.011458595 Sra-1 FBtr0083085 15337735 15338365 3R + 15337849 15337916 3'utr Sra-1 FlyBase G43010.1 TTCTTGGCTATGCTGCCGAAACTTTGACAGTTTTTTTAGTCAAAGTGGCGGTCTTGGTTCTATTTGAA 29 15337902 0.784342005 9 29 256 1 1.505149978 0.4375 0.103448276 0.1875 29 0 0 32 3R:15337849-15337916 2 Sra-1 FBtr0083085 15337735 15338365 AATTCG 6mer3-8 dme-miR-995-5p 3R + 15337886 15337924 3'utr Sra-1 FlyBase G32502.1 AGTCAAAGTGGCGGTCTTGGTTCTATTTGAATTCGATTT 16 15337902 0.83100052 4 15 143 0.958333333 1.361727836 0.291666667 0.3125 0.541666667 16 1 0 23 3R:15337886-15337924 6 4 3747 FBgn0038320 2157.463333 56.28 86.24333333 0.001854029 0.071073205 0.046380397 13 13 13 0.01 dme-miR-317-5p 7mer-A1 TATCCCA 3R 15338061 15338067 + 3R_15338061_15338067_+ 0.823072744 0.823349562 0.823211153 0.000195798 Sra-1 FBtr0083085 15337735 15338365 3R + 15337989 15338101 3'utr Sra-1 FlyBase G43012.1 AATTATATATATATACATGTAGATGTAATTTTGATTCACTTGCTACGGCATTCGATTCAGCTACTCGTACATTATCCCAAATACTCTATTCTAAGCTCCCTAAGATATTATGT 19 15338062 0.839015312 10 13 161 0.772727273 1.230448921 0.045454545 0.166666667 0.318181818 18 5 0 17 3R:15337989-15338101 7 Sra-1 FBtr0083085 15337735 15338365 TATCCCA 7mer-A1 dme-miR-317-5p 3R + 15338028 15338078 3'utr Sra-1 FlyBase G32503.1 TTGCTACGGCATTCGATTCAGCTACTCGTACATTATCCCAAATACTCTATT 5 15338061 0.977457292 3 4 32 1 0.77815125 0.5 0.2 0.333333333 5 0 0 6 3R:15338028-15338078 7 4.5 3748 FBgn0038320 2157.463333 56.28 86.24333333 0.002085783 0.079957356 0.052177946 -1 0 -0.5 0.01 dme-miR-980-5p 7mer-A1 AAAAACA 3R 15338207 15338213 + 3R_15338207_15338213_+ 0.782911824 0.782911824 0.782911824 0 Sra-1 FBtr0083085 15337735 15338365 3R + 15338189 15338340 3'utr Sra-1 FlyBase G43013.1 TGACAGCACTGCGAAAATAAAAACAAATTGGCTTTAAACACAATCAAAGTATTACAAAGAAGATGCCGCACATGTATGCCCACATACATGAAAAGAAGCCACGACAGCCAACAATTGAGACACATACAATTAATACAATGAACATTATCGAA 50 15338216 0.926240882 9 49 176 0.968253968 1.785329835 0.031746032 0.24 0.396825397 50 2 0 61 3R:15338189-15338340 7 Sra-1 FBtr0083085 15337735 15338365 AAAAACA 7mer-A1 dme-miR-980-5p 3R + 15338179 15338230 3'utr Sra-1 FlyBase G32504.1 AGAATTGAATTGACAGCACTGCGAAAATAAAAACAAATTGGCTTTAAACACA 18 15338216 0.956645249 4 16 77 0.96 1.380211242 0.2 0.277777778 0.48 18 1 0 24 3R:15338179-15338230 7 20.5 3749 FBgn0038320 2157.463333 56.28 86.24333333 0.0095019 0.364250178 0.237699532 -9 -9 -9 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 15342104 15342109 + 3R_15342104_15342109_+ 0.999863617 0.999903239 0.999883428 2.80E-05 Aats-ser FBtr0334589 15342088 15343218 3R + 15342046 15342149 stop_codon Aats-ser FlyBase G43022.1 AACGGATACCGGAGACGAAGCTGGTCAAATTCATCAAGGCCTAGGCTTAACACATTCTGTACCTTTGACTGTTATCATTAAATCGTTGGGCTTATCAACGAAAG 222 15342103 0.987810636 18 216 1941 0.975 1.959041392 0.189285714 0.202702703 0.367857143 222 5 2 273 3R:15342046-15342149 6 Aats-ser FBtr0334589 15342088 15343218 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 15342071 15342136 stop_codon Aats-ser FlyBase G32510.1 CAAATTCATCAAGGCCTAGGCTTAACACATTCTGTACCTTTGACTGTTATCATTAAATCGTTGGGC 127 15342103 0.985296864 9 124 1069 0.978947368 1.968482949 0.226315789 0.362204724 0.573684211 127 3 1 186 3R:15342071-15342136 6 170 3750 FBgn0021750 239.2133333 16.63 25.6 0.710662728 10.22248948 6.640625 1 1 1 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 3R 15344215 15344220 - 3R_15344215_15344220_- 0.99730401 0.999741382 0.998522696 0.001723502 Surf4 FBtr0083117 15343651 15344263 3R - 15344057 15344272 stop_codon Surf4 FlyBase G51515.1 AAGTGGTAGAGGCCAGGCAACGGTCGCTCCTTGAACGAAACACTTTCAACATTTGACTTTTACCGTGTTTTACTCCTTCTGAGAAATGTTAGTTAGGAATTACCATAAAATGGGACAACAACAGGAGCAGCATCAGCAGCACAACACCGGCACGTATAAGAACTTGACAATTTTCAATAAAGGGACTTCCGCAATACCCCTCTCCAATGGCTCACT 65 15344213 0.985419434 23 62 495 0.949367089 1.875061263 0.075949367 0.184615385 0.329113924 65 4 0 75 3R:15344057-15344272 6 Surf4 FBtr0083117 15343651 15344263 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 15344165 15344236 3'utr Surf4 FlyBase G38920.1 GAAACACTTTCAACATTTGACTTTTACCGTGTTTTACTCCTTCTGAGAAATGTTAGTTAGGAATTACCATAA 34 15344214 0.987185341 6 33 289 0.98 1.69019608 0.06 0.352941176 0.56 34 1 0 49 3R:15344165-15344236 6 35.5 3751 FBgn0019925 766.2766667 57.29666667 87.82333333 0.046327915 0.619582291 0.404220594 -7 -6 -6.5 0.01 dme-bantam-3p 7mer-m8 TGATCTC 3R 15349509 15349515 + 3R_15349509_15349515_+ 0.661615243 0.661615243 0.661615243 0 CG42726 FBtr0303074 15349502 15350391 3R + 15349468 15349553 stop_codon CG42726 FlyBase G43033.1 AAATATTGGTACCAAAAAGAAGAAAACACAAAGTGACGATATGATCTCTAATGAGTTGGCCCTTTTTCAAAGGGGTCCTCTAATTT 123 15349509 0.929379053 9 117 837 0.959459459 1.67516709 0.304054054 0.170731707 0.310810811 123 4 2 142 3R:15349468-15349553 7 CG42726 FBtr0303074 15349502 15350391 TGATCTC 7mer-m8 dme-bantam-3p 3R + 15349491 15349544 stop_codon CG42726 FlyBase G32519.2 AAACACAAAGTGACGATATGATCTCTAATGAGTTGGCCCTTTTTCAAAGGGGTC 79 15349509 0.629600397 6 74 529 0.93495935 2.06069784 0.422764228 0.405063291 0.617886179 79 8 0 115 3R:15349491-15349544 7 95.5 3752 FBgn0261679 36.5 1.936666667 2.98 2.616438356 49.31153184 32.04697987 0 0 0 0.01 dme-miR-317-5p 7mer-A1 TATCCCA 3R 15353678 15353684 + 3R_15353678_15353684_+ 0.823349562 0.823349562 0.823349562 0 CG5038 FBtr0083089 15353467 15353926 3R + 15353669 15353712 3'utr CG5038 FlyBase G43044.1 ATACATTCATATCCCATCAGCTAAAATCTCATGACACCCTAATT 38 15353690 0.791775568 6 35 232 0.926829268 1.579783597 0 0.078947368 0.146341463 38 3 0 38 3R:15353669-15353712 7 CG5038 FBtr0083089 15353467 15353926 TATCCCA 7mer-A1 dme-miR-317-5p 3R + 15353636 15353713 3'utr CG5038 FlyBase G32523.1 AATTTTAATTCCGTGCAATATTGTATCTATATCATACATTCATATCCCATCAGCTAAAATCTCATGACACCCTAATTG 30 15353690 0.771969573 8 30 195 1 1.643452676 0.022727273 0.4 0.590909091 30 0 0 44 3R:15353636-15353713 7 27.5 3753 FBgn0038324 139.0933333 6.273333333 9.646666667 0.197708972 4.383634431 2.850725639 -12 -12 -12 0.01 dme-miR-31a-5p 6mer2-7 CTTGCC 3R 15358954 15358959 + 3R_15358954_15358959_+ 1 0.924430154 0.962215077 0.053435918 CG5044 FBtr0083091|FBtr0083090 15358810|15358810 15359263|15359263 3R + 15358939 15358970 3'utr CG5044 FlyBase G43057.1 TGTTATGCATGGTTCCTTGCCTGCCGTTTTGC 13 15358956 0.688268888 4 12 111 0.875 1.146128036 0.3125 0.153846154 0.3125 13 2 0 14 3R:15358939-15358970 6 CG5044 FBtr0083091|FBtr0083090 15358810|15358810 15359263|15359263 CTTGCC 6mer2-7 dme-miR-31a-5p 3R + 15358938 15359048 3'utr CG5044 FlyBase G32536.1 ATGTTATGCATGGTTCCTTGCCTGCCGTTTTGCAATATTCTTTATATATCTTTAGCGTTCTGTGGCCACAGTTTGATGAGTTCTGTCGGCTAATTTTCCGCAATCTCTTCT 17 15358957 0.991016983 10 15 154 0.956521739 1.342422681 0.130434783 0.352941176 0.52173913 17 1 0 22 3R:15358938-15359048 6 10 3754 FBgn0038326 271.75 19.3 29.30333333 0.036798528 0.518134715 0.341258105 -2 -3 -2.5 0.01 dme-miR-33-5p 7mer-m8 CAATGCA 3R 15359125 15359131 + 3R_15359125_15359131_+ 0.674515173 0.674515173 0.674515173 0 CG5044 FBtr0083091|FBtr0083090 15358810|15358810 15359263|15359263 3R + 15359076 15359159 3'utr CG5044 FlyBase G43059.1 CGAGGAAGAATCCTATTCGCCGGTATTTACCAATAACGATTGTGAAATTCAATGCATTTAAATATATGATATACATATATGCCT 248 15359124 0.747358497 19 239 2059 0.963934426 1.866287339 0.055737705 0.185483871 0.337704918 248 8 3 294 3R:15359076-15359159 7 CG5044 FBtr0083091|FBtr0083090 15358810|15358810 15359263|15359263 CAATGCA 7mer-m8 dme-miR-33-5p 3R + 15359076 15359147 3'utr CG5044 FlyBase G32537.1 CGAGGAAGAATCCTATTCGCCGGTATTTACCAATAACGATTGTGAAATTCAATGCATTTAAATATATGATAT 138 15359123 0.734142341 17 132 1103 0.97029703 1.593286067 0.059405941 0.333333333 0.544554455 138 2 4 196 3R:15359076-15359147 7 163 3755 FBgn0038326 271.75 19.3 29.30333333 0.599816007 8.445595855 5.56250711 1 2 1.5 0.01 dme-miR-305-3p 6mer2-7 TGTGCC 3R 15359203 15359208 + 3R_15359203_15359208_+ 1 1 1 0 CG5044 FBtr0083091|FBtr0083090 15358810|15358810 15359263|15359263 3R + 15359174 15359237 3'utr CG5044 FlyBase G43060.1 CAATTCGTAGTCCTAATACAATCAATAATTGTGCCTAAAGAATCGTTAGAATTCGTTTACCAAG 28 15359203 0.974200209 7 27 169 1 1.556302501 0.222222222 0.214285714 0.388888889 28 0 0 36 3R:15359174-15359237 6 CG5044 FBtr0083091|FBtr0083090 15358810|15358810 15359263|15359263 TGTGCC 6mer2-7 dme-miR-305-3p 3R + 15359182 15359230 3'utr CG5044 FlyBase G32538.1 AGTCCTAATACAATCAATAATTGTGCCTAAAGAATCGTTAGAATTCGTT 28 15359203 0.946681984 6 24 162 0.925 1.267171728 0.075 0.259259259 0.5 27 2 1 37 3R:15359182-15359230 6 23.5 3756 FBgn0038326 271.75 19.3 29.30333333 0.086476541 1.21761658 0.801956546 0 0 0 0.01 dme-miR-1012-3p 6mer2-7 TGACTA 3R 15362893 15362898 - 3R_15362893_15362898_- 1 1 1 0 CG6171 FBtr0083113 15362794 15363143 3R - 15362847 15362908 stop_codon CG6171 FlyBase G51545.1 TAAGTGGGGATGACTATGATTAGACTATAAATTCAAATTCGCTGTTAACTTAGATGATACGT 29 15362898 0.772267509 9 28 227 1 1.51851394 0.242424242 0.103448276 0.212121212 29 0 0 33 3R:15362847-15362908 6 CG6171 FBtr0083113 15362794 15363143 TGACTA 6mer2-7 dme-miR-1012-3p 3R - 15362833 15362919 stop_codon CG6171 FlyBase G38944.1 TAGCCAACCAATAAGTGGGGATGACTATGATTAGACTATAAATTCAAATTCGCTGTTAACTTAGATGATACGTTCCATTTGCCGAAT 24 15362891 0.984049465 10 23 181 0.95 1.579783597 0.2 0.5 0.7 24 2 0 38 3R:15362833-15362919 6 21 3757 FBgn0026737 228.3266667 29.69333333 45.44333333 0.091973488 0.707229457 0.462113988 0 -7 -3.5 0.01 dme-miR-184-3p 7mer-A1 CCGTCCA 3R 15362964 15362970 - 3R_15362964_15362970_- 0.823349562 0.823349562 0.823349562 0 CG6171 FBtr0083113 15362794 15363143 3R - 15362940 15362989 3'utr CG6171 FlyBase G51546.1 ATGACAGGGATGCGGACTACCGTCCAGGCGCAGACATAAACGAAGATGAG 32 15362972 0.843204968 3 30 81 0.925 1.568201724 0.3 0.15625 0.325 32 3 0 37 3R:15362940-15362989 7 CG6171 FBtr0083113 15362794 15363143 CCGTCCA 7mer-A1 dme-miR-184-3p 3R - 15362933 15362987 3'utr CG6171 FlyBase G38945.1 GACAGGGATGCGGACTACCGTCCAGGCGCAGACATAAACGAAGATGAGGATGATG 19 15362972 0.852261304 4 19 45 1 1.447158031 0.357142857 0.368421053 0.571428571 19 0 0 28 3R:15362933-15362987 7 24.5 3758 FBgn0026737 228.3266667 29.69333333 45.44333333 0.107302403 0.825101033 0.539132986 2 2 2 0.01 dme-miR-263a-5p 7mer-m8 GTGCCAT 3R 15364259 15364265 - 3R_15364259_15364265_- 0.432016064 0.659000077 0.545508071 0.160501926 CG34404 FBtr0112669|FBtr0112668|FBtr0112667 15363784|15363784|15363931 15364443|15364443|15364443 3R - 15364240 15364278 3'utr CG34404 FlyBase G51551.2 CAGTATCACGAATGTGCCATGCGACTTAATTGCAGTCGG 6 15364265 0.744648446 3 5 28 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 3R:15364240-15364278 7 CG34404 FBtr0112667|FBtr0112668|FBtr0112669 15363931|15363784|15363784 15364443|15364443|15364443 GTGCCAT 7mer-m8 dme-miR-263a-5p 3R - 15364234 15364265 3'utr CG34404 FlyBase G38947.1 GTGCCATGCGACTTAATTGCAGTCGGCTGGGG 5 15364259 0.745631029 3 4 24 0.75 0.77815125 0.125 0.6 0.75 5 2 0 6 3R:15364234-15364265 7 4.5 3759 FBgn0085433 210 8.973333333 13.64 0.021428571 0.501485884 0.329912023 0 -6 -3 0.01 dme-miR-276a-3p 6mer3-8 AGTTCC 3R 15415344 15415349 + 3R_15415344_15415349_+ 1 1 1 0 Atx2 FBtr0083101 15415017 15416472 3R + 15415319 15415375 5'utr Atx2 FlyBase G43083.1 CCGTCGCCGGGCCAGCCGCACCAGCAGTTCCATCCGCCGCCACAGCCATCCCCCGCC 33 15415346 0.845266121 2 32 69 0.972222222 1.544068044 0.111111111 0.090909091 0.166666667 33 1 0 35 3R:15415319-15415375 6 Atx2 FBtr0083101 15415017 15416472 AGTTCC 6mer3-8 dme-miR-276a-3p 3R + 15415321 15415374 5'utr Atx2 FlyBase G32555.1 GTCGCCGGGCCAGCCGCACCAGCAGTTCCATCCGCCGCCACAGCCATCCCCCGC 13 15415346 0.836030545 2 11 27 0.789473684 1.176091259 0.263157895 0.384615385 0.578947368 13 4 0 15 3R:15415321-15415374 6 21.5 3760 FBgn0041188 1154.45 29.14333333 44.74333333 0.018623587 0.737733044 0.480518513 -2 -2 -2 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 15417160 15417165 + 3R_15417160_15417165_+ 1 1 1 0 Atx2 FBtr0083100|FBtr0344377 15415551|15415551 15417277|15417277 3R + 15417099 15417188 3'utr Atx2 FlyBase G43090.1 TAACAAGAACAATCCGTATTACTTCTTTGCCCGTCATAAATCGGTTTGGTTATATTTCGTATGATCTAGAAGCATCTGTTGTGGTCTGTT 216 15417160 0.989513633 9 213 2063 0.987654321 2.380211242 0.432098765 0.111111111 0.209876543 216 3 0 240 3R:15417099-15417188 6 Atx2 FBtr0083100|FBtr0344377 15415551|15415551 15417277|15417277 TGATCT 6mer3-8 dme-bantam-3p 3R + 15417123 15417188 3'utr Atx2 FlyBase G32559.1 CTTTGCCCGTCATAAATCGGTTTGGTTATATTTCGTATGATCTAGAAGCATCTGTTGTGGTCTGTT 100 15417160 0.919584414 7 95 910 0.952662722 2.206825876 0.455621302 0.46 0.680473373 100 8 0 161 3R:15417123-15417188 6 154.5 3761 FBgn0041188 1154.45 29.14333333 44.74333333 0.133829962 5.301383964 3.453028384 0 0 0 0.01 dme-miR-34-5p 8mer-A1 CACTGCCA 3R 15442401 15442408 - 3R_15442401_15442408_- 0.678407974 0.678407974 0.678407974 0 AdamTS-A FBtr0334629|FBtr0339398|FBtr0083160 15442244|15442244|15442244 15443238|15443238|15443238 3R - 15442350 15442423 3'utr AdamTS-A FlyBase G51563.1 TTGATTGATTGTTATCACTGCCAGATTTTCAACGTTCAATCGATTGTATCCCAAATCGCCTAAGTCCCGGTACC 62 15442410 0.748186109 15 55 491 0.884057971 1.183269844 0.536231884 0.112903226 0.202898551 62 5 3 61 3R:15442350-15442423 8 AdamTS-A FBtr0083160|FBtr0339398|FBtr0334629 15442244|15442244|15442244 15443238|15443238|15443238 CACTGCCA 8mer-A1 dme-miR-34-5p 3R - 15442277 15442427 3'utr AdamTS-A FlyBase G38954.1 ACTCTTGATTGATTGTTATCACTGCCAGATTTTCAACGTTCAATCGATTGTATCCCAAATCGCCTAAGTCCCGGTACCAAGTATCCTCGCTGTATTTTCATTTAACTAGCTAGGCTAATGCAAAACCAATGTTAACAATTAATTTAATGTC 64 15442409 0.985814981 23 59 493 0.94 1.672097858 0.43 0.34375 0.58 64 5 1 94 3R:15442277-15442427 8 45 3762 FBgn0038341 333.3333333 5.796666667 8.936666667 0.135 7.763082231 5.035434539 2 1 1.5 0.01 dme-miR-1003-3p 7mer-m8 ATGTGAG 3R 15442900 15442906 - 3R_15442900_15442906_- 0.671796207 0.671796207 0.671796207 0 AdamTS-A FBtr0334629|FBtr0339398|FBtr0083160 15442244|15442244|15442244 15443238|15443238|15443238 3R - 15442807 15442959 3'utr AdamTS-A FlyBase G51566.1 AGTAACTAGATATTATTGCCATGTAATGTATTAAGTATTGTAAATACTAGAGGATGTGAGCCTTTGAATTAGCAAATAGGGATTATCCATCATCATAGGTCGTCGCTCAGATAAGCCCGTATTTGTGCCAACTCCGGTATGCAGTGATGGAAG 31 15442903 0.97447262 19 31 225 1 1.544068044 0.142857143 0.096774194 0.2 31 0 0 35 3R:15442807-15442959 7 AdamTS-A FBtr0083160|FBtr0339398|FBtr0334629 15442244|15442244|15442244 15443238|15443238|15443238 ATGTGAG 7mer-m8 dme-miR-1003-3p 3R - 15442877 15442957 3'utr AdamTS-A FlyBase G38958.1 TAACTAGATATTATTGCCATGTAATGTATTAAGTATTGTAAATACTAGAGGATGTGAGCCTTTGAATTAGCAAATAGGGAT 19 15442903 0.962982093 8 17 136 0.904761905 0.977723605 0 0.105263158 0.19047619 19 1 1 19 3R:15442877-15442957 7 15 3763 FBgn0038341 333.3333333 5.796666667 8.936666667 0.045 2.587694077 1.67847818 -3 -3 -3 0.01 dme-miR-190-5p 6mer2-7 CATATC 3R 15442997 15443002 - 3R_15442997_15443002_- 1 1 1 0 AdamTS-A FBtr0334629|FBtr0339398|FBtr0083160 15442244|15442244|15442244 15443238|15443238|15443238 3R - 15442981 15443031 3'utr AdamTS-A FlyBase G51567.1 TAATCGTGTCGAAGTAGCCCGAACAAAACCATATCGTCTGTATATATATAT 14 15443017 0.998314235 3 14 51 1 1.176091259 0.2 0.071428571 0.133333333 14 0 0 15 3R:15442981-15443031 6 AdamTS-A FBtr0083160|FBtr0339398|FBtr0334629 15442244|15442244|15442244 15443238|15443238|15443238 CATATC 6mer2-7 dme-miR-190-5p 3R - 15442972 15443030 3'utr AdamTS-A FlyBase G38959.1 AATCGTGTCGAAGTAGCCCGAACAAAACCATATCGTCTGTATATATATATAATTATATT 13 15443017 0.897740836 6 11 80 0.833333333 1.301029996 0.291666667 0.615384615 0.791666667 13 4 0 20 3R:15442972-15443030 6 7.5 3764 FBgn0038341 333.3333333 5.796666667 8.936666667 0.0225 1.293847039 0.83923909 15 15 15 0.01 dme-miR-282-5p 6mer2-7 GAGGCT 3R 15493037 15493042 + 3R_15493037_15493042_+ 1 1 1 0 CG5205 FBtr0083147 15492984 15493310 3R + 15493003 15493063 3'utr CG5205 FlyBase G43107.1 AAATCTAAAGTGTACCGTAGCATTCTGTAGAGTTGAGGCTTAACTTTTAGTTAATGGAGTT 15 15493036 0.968047578 8 15 112 1 1.255272505 0 0.2 0.333333333 15 0 0 18 3R:15493003-15493063 6 CG5205 FBtr0083147 15492984 15493310 GAGGCT 6mer2-7 dme-miR-282-5p 3R + 15493003 15493057 3'utr CG5205 FlyBase G32565.1 AAATCTAAAGTGTACCGTAGCATTCTGTAGAGTTGAGGCTTAACTTTTAGTTAAT 23 15493036 0.836384674 6 23 197 1 1.602059991 0 0.434782609 0.675 23 0 0 40 3R:15493003-15493057 6 16 3765 FBgn0038344 937.8966667 16.18666667 24.77666667 0.017059449 0.988467875 0.645768869 1 1 1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 15493142 15493147 + 3R_15493142_15493147_+ 1 1 1 0 CG5205 FBtr0083147|FBtr0083147|FBtr0083147 15492984|15492984|15492984 15493310|15493310|15493310 3R + 15493130 15493161 3'utr CG5205 FlyBase G43108.1 GCGTATTTATTGTGTGATCCTCCAAGACATGT 11 15493141 0.915054294 4 9 103 0.857142857 0.602059991 0.142857143 0.181818182 0.357142857 11 0 2 12 3R:15493130-15493161 6 CG5205 FBtr0083147|FBtr0083147|FBtr0083147 15492984|15492984|15492984 15493310|15493310|15493310 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 15493121 15493159 3'utr CG5205 FlyBase G32566.1 ACTGAACTTGCGTATTTATTGTGTGATCCTCCAAGACAT 11 15493142 0.971903474 5 10 94 0.944444444 1.230448921 0.166666667 0.454545455 0.666666667 11 1 0 17 3R:15493121-15493159 6 10.5 3766 FBgn0038344 937.8966667 16.18666667 24.77666667 0.011195263 0.648682043 0.42378582 1 0 0.5 0.01 dme-miR-317-5p 7mer-m8 GTATCCC 3R 15532296 15532302 - 3R_15532296_15532302_- 0.705949576 0.705949576 0.705949576 0 AOX1 FBtr0083154 15532135 15532325 3R - 15532291 15532330 stop_codon AOX1 FlyBase G51575.1 ACTAGGTGGAGAAGAAGAATGTGGACTCGTATCCCTGACC 15 15532309 0.82990928 2 14 79 1 1.204119983 0.5 0.066666667 0.125 15 0 0 16 3R:15532291-15532330 7 AOX1 FBtr0083154 15532135 15532325 GTATCCC 7mer-m8 dme-miR-317-5p 3R - 15532286 15532329 stop_codon AOX1 FlyBase G38966.1 CTAGGTGGAGAAGAAGAATGTGGACTCGTATCCCTGACCGTGGG 5 15532309 0.927136264 2 5 22 1 0.903089987 0.125 0.6 0.75 5 0 0 8 3R:15532286-15532329 7 8.5 3767 FBgn0267408 1518.476667 44.04333333 68.01 0.005597715 0.192991751 0.12498162 7 7 7 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3R 15688239 15688245 + 3R_15688239_15688245_+ 0.443131017 0.443131017 0.443131017 0 pxb FBtr0334025|FBtr0083162 15687935|15687935 15690513|15688451 3R + 15688215 15688293 3'utr pxb FlyBase G43116.1 TATAGGTCTTAAGTGTTTTTCCAATGTGATTGCCAAATTCTACATTATAATACTAAACTTTATTGAAACCTGCAAAACT 28 15688245 0.958326109 6 28 235 1 1.591064607 0 0.321428571 0.512820513 28 0 0 39 3R:15688215-15688293 7 pxb FBtr0334025|FBtr0083162 15687935|15687935 15690513|15688451 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 15688209 15688293 3'utr pxb FlyBase G32574.1 AGAACTTATAGGTCTTAAGTGTTTTTCCAATGTGATTGCCAAATTCTACATTATAATACTAAACTTTATTGAAACCTGCAAAACT 28 15688245 0.855701666 6 27 250 0.951219512 1.113943352 0.024390244 0.321428571 0.536585366 28 0 2 39 3R:15688209-15688293 7 23.5 3768 FBgn0053207 527.4133333 20.74333333 31.55333333 0.044557084 1.132894103 0.744770759 -6 -6 -6 0.01 dme-bantam-3p 6mer2-7 GATCTC 3R 15798839 15798844 + 3R_15798839_15798844_+ 1 1 1 0 nsl1 FBtr0301732 15798480 15801925 3R + 15798807 15798860 stop_codon nsl1 FlyBase G43141.1 CGACAACGCCACCACAGTCCCTCCTCAACCTCGATCTCGGCACTGAGCGGCGCT 15 15798837 0.982812053 2 10 77 0.611111111 1.041392685 0.222222222 0.133333333 0.277777778 15 7 0 11 3R:15798807-15798860 6 nsl1 FBtr0301732 15798480 15801925 GATCTC 6mer2-7 dme-bantam-3p 3R + 15798807 15798855 3'utr nsl1 FlyBase G32593.1 CGACAACGCCACCACAGTCCCTCCTCAACCTCGATCTCGGCACTGAGCG 11 15798837 0.96037655 3 10 49 0.944444444 1.230448921 0.444444444 0.454545455 0.666666667 11 1 0 17 3R:15798807-15798855 6 12 3769 FBgn0262527 2734.32 54.57333333 83.61333333 0.00438866 0.219887613 0.14351778 2 2 2 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG 3R 15799453 15799458 + 3R_15799453_15799458_+ 1 1 1 0 nsl1 FBtr0309860|FBtr0301732|FBtr0309859 15798861|15798480|15798861 15801925|15801925|15801220 3R + 15799400 15799465 3'utr nsl1 FlyBase G43144.1 CGATAAGGGAAAACATTCGTCAGATGAGTCAATGGAGCGCAAACTGAGCAATGGCTGTGTCGCATC 23 15799451 0.958667252 3 22 105 0.96 1.380211242 0.24 0.043478261 0.12 23 1 0 24 3R:15799400-15799465 6 nsl1 FBtr0309859|FBtr0309860|FBtr0301732 15798861|15798861|15798480 15801220|15801925|15801925 GCTGTG 6mer2-7 dme-miR-1008-3p 3R + 15799417 15799464 3'utr nsl1 FlyBase G32595.1 CGTCAGATGAGTCAATGGAGCGCAAACTGAGCAATGGCTGTGTCGCAT 13 15799451 0.967094614 3 11 59 0.777777778 0.84509804 0.166666667 0.307692308 0.5 13 3 1 14 3R:15799417-15799464 6 16.5 3770 FBgn0262527 2734.32 54.57333333 83.61333333 0.006034407 0.302345468 0.197336948 2 2 2 0.01 dme-miR-79-3p 7mer-A1 AGCTTTA 3R 15800876 15800882 + 3R_15800876_15800882_+ 0.799652767 0.815489554 0.807571161 0.011198309 nsl1 FBtr0309860|FBtr0301732|FBtr0309859 15798861|15798480|15798861 15801925|15801925|15801220 3R + 15800849 15800899 3'utr nsl1 FlyBase G43149.1 AGCCGTCGACACCAGATGTCGAGCATGAGCTTTACGACTCGGCGATCGATG 10 15800874 0.954359407 5 10 47 1 1.079181246 0.333333333 0.2 0.333333333 10 0 0 12 3R:15800849-15800899 7 nsl1 FBtr0309859|FBtr0309860|FBtr0301732 15798861|15798861|15798480 15801220|15801925|15801925 AGCTTTA 7mer-A1 dme-miR-79-3p 3R + 15800851 15800893 3'utr nsl1 FlyBase G32598.1 CCGTCGACACCAGATGTCGAGCATGAGCTTTACGACTCGGCGA 8 15800879 0.741676947 3 8 32 1 1 0.4 0.25 0.4 8 0 0 10 3R:15800851-15800893 7 7.5 3771 FBgn0262527 2734.32 54.57333333 83.61333333 0.002742912 0.137429758 0.089698613 2 -3 -0.5 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3R 15801049 15801054 + 3R_15801049_15801054_+ 1 1 1 0 nsl1 FBtr0309860|FBtr0301732|FBtr0301726|FBtr0334592|FBtr0309863|FBtr0309862|FBtr0301727|FBtr0309859|FBtr0309861|FBtr0301731|FBtr0301728|FBtr0301730 15798861|15798480|15801020|15801020|15801020|15801020|15801020|15798861|15801020|15801020|15801020|15801020 15801925|15801925|15801220|15802102|15801925|15801220|15801925|15801220|15801220|15801925|15801925|15801925 3R + 15801037 15801061 3'utr nsl1 FlyBase G43150.1 TTTTCGTTATTTAAGACTTTTAAAC 10 15801056 0.740047979 4 10 84 1 1.113943352 0 0.2 0.384615385 10 0 0 13 3R:15801037-15801061 6 nsl1 FBtr0301730|FBtr0309863|FBtr0309859|FBtr0309862|FBtr0309861|FBtr0301727|FBtr0301728|FBtr0301731|FBtr0309860|FBtr0301732|FBtr0301726|FBtr0334592 15801020|15801020|15798861|15801020|15801020|15801020|15801020|15801020|15798861|15798480|15801020|15801020 15801925|15801925|15801220|15801220|15801220|15801925|15801925|15801925|15801925|15801925|15801220|15802102 AAGACT 6mer3-8 dme-miR-14-3p 3R + 15801004 15801072 stop_codon nsl1 FlyBase G32599.1 CGCAGCAGACGCATCTAAGACCAAAATCCAAAGTTTTCGTTATTTAAGACTTTTAAACGATTTGTCAAT 14 15801056 0.984066557 4 14 110 1 1.342422681 0.181818182 0.357142857 0.590909091 14 0 0 22 3R:15801004-15801072 6 10.5 3772 FBgn0262527 2734.32 54.57333333 83.61333333 0.003840077 0.192401661 0.125578058 -7 -7 -7 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 3R 15823606 15823612 + 3R_15823606_15823612_+ 0.823349562 0.823349562 0.823349562 0 alpha-Man-IIb FBtr0083179|FBtr0345238|FBtr0334593 15822936|15822936|15822936 15824118|15824118|15824118 3R + 15823585 15823628 3'utr alpha-Man-IIb FlyBase G43158.1 AGCGTTCGCATCGATTTGTTTAGACTGATTAGCCTAAAACGATT 68 15823604 0.730388281 8 68 633 1 1.86332286 0.150684932 0.073529412 0.136986301 68 0 0 73 3R:15823585-15823628 7 alpha-Man-IIb FBtr0334593|FBtr0345238|FBtr0083179 15822936|15822936|15822936 15824118|15824118|15824118 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 15823585 15823626 3'utr alpha-Man-IIb FlyBase G32605.1 AGCGTTCGCATCGATTTGTTTAGACTGATTAGCCTAAAACGA 43 15823604 0.707266663 6 42 397 0.986111111 1.851258349 0.236111111 0.372093023 0.625 43 1 0 71 3R:15823585-15823626 7 55.5 3773 FBgn0026616 98.7 2.216666667 3.413333333 0.56231003 25.03759398 16.25976563 2 2 2 0.01 dme-bantam-3p 7mer-m8 TGATCTC 3R 15844299 15844305 + 3R_15844299_15844305_+ 0.661615243 0.661615243 0.661615243 0 spn-E FBtr0083183 15844105 15844415 3R + 15844281 15844330 3'utr spn-E FlyBase G43165.1 TTTCTATGTTATGTTGAATGATCTCTCTTCGTTCAATTACGAAGTGTAAA 23 15844299 0.823496831 4 22 270 0.961538462 1.397940009 0.153846154 0.130434783 0.230769231 23 1 0 25 3R:15844281-15844330 7 spn-E FBtr0083183 15844105 15844415 TGATCTC 7mer-m8 dme-bantam-3p 3R + 15844286 15844332 3'utr spn-E FlyBase G32609.1 ATGTTATGTTGAATGATCTCTCTTCGTTCAATTACGAAGTGTAAAAT 21 15844298 0.747508333 6 19 227 0.964285714 1.130333768 0.178571429 0.333333333 0.5 21 0 1 27 3R:15844286-15844332 7 21.5 3774 FBgn0003483 512.23 13.13666667 20.07333333 0.041973332 1.636640447 1.071072733 0 1 0.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 15853894 15853899 - 3R_15853894_15853899_- 1 1 1 0 Hmt-1 FBtr0083188 15853866 15854095 3R - 15853846 15853929 3'utr Hmt-1 FlyBase G51625.1 GAGATTTAATATAATTTAAATGTGTCTGGTACCAAATAAATAGCGCAATATTGTGTATTTCTAGTCCTTATTAAATTATTAAGT 28 15853900 0.983759413 7 26 227 0.947368421 1.556302501 0.263157895 0.285714286 0.473684211 28 2 0 36 3R:15853846-15853929 6 Hmt-1 FBtr0083188 15853866 15854095 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 15853846 15853936 3'utr Hmt-1 FlyBase G39000.1 AATCCGCGAGATTTAATATAATTTAAATGTGTCTGGTACCAAATAAATAGCGCAATATTGTGTATTTCTAGTCCTTATTAAATTATTAAGT 16 15853871 0.989831076 5 14 143 0.966666667 1.462397998 0.1 0.5 0.733333333 16 1 0 29 3R:15853846-15853936 6 10 3775 FBgn0038376 648.03 26.12666667 39.84666667 0.015431384 0.382750702 0.250962021 1 -28 -13.5 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3R 15854046 15854052 - 3R_15854046_15854052_- 0.443131018 0.443131018 0.443131018 0 Hmt-1 FBtr0083188 15853866 15854095 3R - 15853964 15854083 3'utr Hmt-1 FlyBase G51626.1 TACAGAGTAGTTTCTGATATTCCTGATTCCATGTGATTTGTGGTGTATTGTTATACGTATGAGAGCAGCTCGTCAAAGTCTTAGTTCGTCTATAAGTAACCTTATATGCTACTCTTATAC 111 15854046 0.990448997 15 109 1111 0.986013986 1.672097858 0.111888112 0.207207207 0.384615385 111 0 2 141 3R:15853964-15854083 7 Hmt-1 FBtr0083188 15853866 15854095 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 15853988 15854085 3'utr Hmt-1 FlyBase G39001.1 CATACAGAGTAGTTTCTGATATTCCTGATTCCATGTGATTTGTGGTGTATTGTTATACGTATGAGAGCAGCTCGTCAAAGTCTTAGTTCGTCTATAAG 82 15854046 0.989547903 14 81 786 0.992307692 2.11058971 0.161538462 0.402439024 0.623076923 82 1 0 129 3R:15853988-15854085 7 85.5 3776 FBgn0038376 648.03 26.12666667 39.84666667 0.131938336 3.2725185 2.14572528 -6 -6 -6 0.01 dme-miR-305-5p 8mer-A1 AGTACAAA 3R 15934698 15934705 + 3R_15934698_15934705_+ 0.605654138 0.605654138 0.605654138 0 blp FBtr0345214|FBtr0083203 15934636|15934636 15934940|15934940 3R + 15934644 15934741 3'utr blp FlyBase G43172.1 TTGTTGTCCCAATCGAACTAATTAGCTGATAATTGATTTAAAAACTACGTGTTAAGTACAAAAAATGAAAGTCTGTTGCTGTAAATAGAGATTTACGA 33 15934720 0.724706292 9 31 204 0.948717949 1.568201724 0.384615385 0.121212121 0.256410256 33 2 0 37 3R:15934644-15934741 8 blp FBtr0345214|FBtr0083203 15934636|15934636 15934940|15934940 AGTACAAA 8mer-A1 dme-miR-305-5p 3R + 15934645 15934734 3'utr blp FlyBase G32614.1 TGTTGTCCCAATCGAACTAATTAGCTGATAATTGATTTAAAAACTACGTGTTAAGTACAAAAAATGAAAGTCTGTTGCTGTAAATAGAGA 34 15934719 0.736941988 9 33 206 0.946428571 1.72427587 0.321428571 0.470588235 0.678571429 34 3 0 53 3R:15934645-15934734 8 22.5 3777 FBgn0038387 172.3333333 22.73666667 34.87666667 0.130560928 0.989590969 0.64513046 -22 -21 -21.5 0.01 dme-miR-304-5p 7mer-m8 TGAGATT 3R 15962371 15962377 - 3R_15962371_15962377_- 0.620203442 0.620203442 0.620203442 0 CG4287 FBtr0083240|FBtr0301716 15962165|15962165 15962537|15962537 3R - 15962350 15962394 3'utr CG4287 FlyBase G51636.1 AAATATGGGGACACCTATGAGATTTACAGATTTTAGTCAATTGCA 22 15962377 0.747213711 4 21 147 0.964285714 1.431363764 0.25 0.227272727 0.392857143 22 1 0 27 3R:15962350-15962394 7 CG4287 FBtr0083240|FBtr0301716 15962165|15962165 15962537|15962537 TGAGATT 7mer-m8 dme-miR-304-5p 3R - 15962349 15962390 3'utr CG4287 FlyBase G39008.1 ATGGGGACACCTATGAGATTTACAGATTTTAGTCAATTGCAA 9 15962377 0.812112578 4 9 59 1 1.176091259 0.4 0.333333333 0.6 9 0 0 15 3R:15962349-15962390 7 15.5 3778 FBgn0038388 224 16.66 25.57666667 0.069196429 0.930372149 0.606021113 0 0 0 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3R 15962460 15962465 - 3R_15962460_15962465_- 1 1 1 0 CG4287 FBtr0083240|FBtr0301716 15962165|15962165 15962537|15962537 3R - 15962442 15962481 3'utr CG4287 FlyBase G51637.1 GAAAAATCATTGAAATTGTGTTACTAGCCGTAAGCAAAGC 89 15962466 0.754509994 6 81 707 0.900990099 1.356981401 0.059405941 0.078651685 0.188118812 89 7 3 91 3R:15962442-15962481 6 CG4287 FBtr0083240|FBtr0301716 15962165|15962165 15962537|15962537 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 15962440 15962478 3'utr CG4287 FlyBase G39010.1 AAATCATTGAAATTGTGTTACTAGCCGTAAGCAAAGCGA 49 15962466 0.74753803 6 45 386 0.945945946 1.367976785 0.040540541 0.367346939 0.581081081 49 2 2 70 3R:15962440-15962478 6 69 3779 FBgn0038388 224 16.66 25.57666667 0.308035714 4.141656663 2.697771406 1 1 1 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT 3R 15983389 15983394 + 3R_15983389_15983394_+ 1 1 1 0 Hel89B FBtr0344471|FBtr0301715 15983324|15983324 15983451|15983451 3R + 15983359 15983431 3'utr Hel89B FlyBase G43231.1 AGGCTACGTTGATCATTTATATTGCCCTCTGTTCCTTTATAATCGCGAAAAGAAACTTTTAGAAATAAATATT 28 15983397 0.982343886 9 28 210 1 1.51851394 0.212121212 0.142857143 0.272727273 28 0 0 33 3R:15983359-15983431 6 Hel89B FBtr0344471|FBtr0301715 15983324|15983324 15983451|15983451 GTTCCT 6mer2-7 dme-miR-276a-3p 3R + 15983348 15983428 3'utr Hel89B FlyBase G32657.1 CTTCCAGTTTTAGGCTACGTTGATCATTTATATTGCCCTCTGTTCCTTTATAATCGCGAAAAGAAACTTTTAGAAATAAAT 25 15983398 0.914708736 10 22 204 0.914285714 1.204119983 0.342857143 0.32 0.514285714 25 2 1 32 3R:15983348-15983428 6 17 3780 FBgn0022787 1806.236667 33.54666667 51.41 0.009411834 0.506756757 0.330674966 -8 -9 -8.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 16003563 16003569 + 3R_16003563_16003569_+ 0.819680221 0.822564939 0.82112258 0.002039791 srp FBtr0335424 16003135 16004081 3R + 16003393 16003610 stop_codon srp FlyBase G43262.1 CAGCTGCAGCAGCAGACTGCCGCCCTCTTGGGTCAACATGAGCAGCATGTGACCAACTATGCGATGCATAAGTTCGGCGTTGACCGGGAAACAGTGGTGAAGATGGAGTAGGCGCGACACGCTGTATGTCGCACGACCAAAGATTCTGTTGTTACATTAATCTCATAGCTCCAAAGAATTTATAGCCTGTATACCAAGAGCAGTTCTCAAAGAACACT 531 16003549 0.855615541 36 497 3843 0.937791602 2.002166062 0.077760498 0.175141243 0.31881804 531 35 5 603 3R:16003393-16003610 7 srp FBtr0335424 16003135 16004081 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 16003379 16003671 stop_codon srp FlyBase G32683.2 AGCAGCAGCAGCAACAGCTGCAGCAGCAGACTGCCGCCCTCTTGGGTCAACATGAGCAGCATGTGACCAACTATGCGATGCATAAGTTCGGCGTTGACCGGGAAACAGTGGTGAAGATGGAGTAGGCGCGACACGCTGTATGTCGCACGACCAAAGATTCTGTTGTTACATTAATCTCATAGCTCCAAAGAATTTATAGCCTGTATACCAAGAGCAGTTCTCAAAGAACACTCATCTATCTAAAATCTATCGAATCATTAGTTGTACATACGGTCTAAATCGATTGATACTTA 337 16003549 0.9723129 41 313 2355 0.94 1.769007871 0.12 0.367952522 0.574 337 23 7 470 3R:16003379-16003671 7 262.5 3781 FBgn0003507 2528.6 69.84666667 106.7833333 0.103812386 3.758232318 2.45824879 14 14 14 0.01 dme-miR-92b-3p 7mer-m1 TGCAATT 3R 16003938 16003944 + 3R_16003938_16003944_+ 0.765586663 0.765586663 0.765586663 0 srp FBtr0335424 16003135 16004081 3R + 16003614 16003963 3'utr srp FlyBase G43262.2 CTATCTAAAATCTATCGAATCATTAGTTGTACATACGGTCTAAATCGATTGATACTTACATTTTCGTCGAATTTTAATGGTCCACTACTCGAAATTTGTTATGAAATACTAGTTTAATTGTTAGCAAAATGCCAACAGCATAAAATCGATTCAGAAACTAGGCTAAGAATGTTCATTTAAAATTTTGTTATCAAATCGAATACCTTTTGAGATTTCCTACAATCAAATTCCACTTAGATATTAGCCACAAATCATAGTTAAGTCAACCAAAAAAAGGCAAATGAAAACGAAAAAGAATAACAATCGAAGTAACCAATAATCTCATGCAATTAGCTATTAATTTATATATT 365 16003930 0.999999402 54 346 2252 0.966442953 2.033423755 0.089485459 0.175342466 0.326621924 365 12 3 432 3R:16003614-16003963 7 srp FBtr0335424 16003135 16004081 TGCAATT 7mer-m1 dme-miR-92b-3p 3R + 16003715 16003963 3'utr srp FlyBase G32683.4 TGAAATACTAGTTTAATTGTTAGCAAAATGCCAACAGCATAAAATCGATTCAGAAACTAGGCTAAGAATGTTCATTTAAAATTTTGTTATCAAATCGAATACCTTTTGAGATTTCCTACAATCAAATTCCACTTAGATATTAGCCACAAATCATAGTTAAGTCAACCAAAAAAAGGCAAATGAAAACGAAAAAGAATAACAATCGAAGTAACCAATAATCTCATGCAATTAGCTATTAATTTATATATT 285 16003938 0.975782655 30 275 1584 0.964370546 2.608526034 0.087885986 0.343859649 0.555819477 285 15 0 406 3R:16003715-16003963 7 216.5 3782 FBgn0003507 2528.6 69.84666667 106.7833333 0.085620501 3.099646845 2.027469955 8 0 4 0.01 dme-bantam-3p 7mer-m8 TGATCTC 3R 16040344 16040350 + 3R_16040344_16040350_+ 0.661614883 0.66161515 0.661615016 1.41E-07 pnr FBtr0083220|FBtr0335426|FBtr0083221|FBtr0335427 16040311|16040311|16040311|16040311 16040915|16041796|16040915|16041796 3R + 16040115 16040678 stop_codon pnr FlyBase G43283.1 GCCGCCTACGGCGTAAAGACAGAGGCGAGTGCCACCAACTACGACTATGTGAACAACTGCTACTTTGGGGGCACCTTCGGTGCGCTGGGAGGAGCTGCAACCACAACCGCCATGGCTGGCGGAGCGGCCAGTGAACTGGCTGGCTACCATCACCAGCACAACGTCATCCAGGCAGCCAAACTGATGGCCACCTCGTAAAGTTAAAAATCTGGACACTGGCTCTGTGATGTGATCTCCTTCCTCCTCCTAAACTGCACCCTCACTTGAAGCCTTCCTTGGAATCATGGCATTGAAAAGACTTTAGACATTAGTACTACTCGGCCTTGTTTGCAATTTCGTTTAATTAAGTTTAGCTAATTGTGTGACTTTCTGAAACGTATTTTCGGAATAGCTTAGTTCTAGCTAACTATCATGAATTAGCTATGTTTAATTGAATTTTGGGTCGCAAATGGGGTTTTTTAGTTTAAGAGCTGCCTGAATGGCACTTAGTTTTTATTTCTTGTAAATAACTAATAGCAATTCTTGTTGTACAAATCTGCGTCTATATGTATGTGCTTATCCATC 3121 16040352 0.975810479 109 2977 23191 0.954081633 2.006527163 0.095327605 0.164370394 0.299677766 3121 137 34 3553 3R:16040115-16040678 7 pnr FBtr0083221|FBtr0335427|FBtr0083220|FBtr0335426 16040311|16040311|16040311|16040311 16040915|16041796|16040915|16041796 TGATCTC 7mer-m8 dme-bantam-3p 3R + 16040276 16040522 stop_codon pnr FlyBase G32702.2 CGTCATCCAGGCAGCCAAACTGATGGCCACCTCGTAAAGTTAAAAATCTGGACACTGGCTCTGTGATGTGATCTCCTTCCTCCTCCTAAACTGCACCCTCACTTGAAGCCTTCCTTGGAATCATGGCATTGAAAAGACTTTAGACATTAGTACTACTCGGCCTTGTTTGCAATTTCGTTTAATTAAGTTTAGCTAATTGTGTGACTTTCTGAAACGTATTTTCGGAATAGCTTAGTTCTAGCTAACT 2020 16040352 0.793850014 53 1917 14765 0.950149551 1.979092901 0.083084081 0.361386139 0.571286142 2020 121 29 2859 3R:16040276-16040522 7 998.5 3783 FBgn0003117 3353.65 145.2033333 222.1433333 0.297735303 6.876563899 4.49484567 -8 -8 -8 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3R 16040409 16040414 + 3R_16040409_16040414_+ 1 1 1 0 pnr FBtr0083220|FBtr0335426|FBtr0083221|FBtr0335427 16040311|16040311|16040311|16040311 16040915|16041796|16040915|16041796 3R + 16040115 16040678 stop_codon pnr FlyBase G43283.1 GCCGCCTACGGCGTAAAGACAGAGGCGAGTGCCACCAACTACGACTATGTGAACAACTGCTACTTTGGGGGCACCTTCGGTGCGCTGGGAGGAGCTGCAACCACAACCGCCATGGCTGGCGGAGCGGCCAGTGAACTGGCTGGCTACCATCACCAGCACAACGTCATCCAGGCAGCCAAACTGATGGCCACCTCGTAAAGTTAAAAATCTGGACACTGGCTCTGTGATGTGATCTCCTTCCTCCTCCTAAACTGCACCCTCACTTGAAGCCTTCCTTGGAATCATGGCATTGAAAAGACTTTAGACATTAGTACTACTCGGCCTTGTTTGCAATTTCGTTTAATTAAGTTTAGCTAATTGTGTGACTTTCTGAAACGTATTTTCGGAATAGCTTAGTTCTAGCTAACTATCATGAATTAGCTATGTTTAATTGAATTTTGGGTCGCAAATGGGGTTTTTTAGTTTAAGAGCTGCCTGAATGGCACTTAGTTTTTATTTCTTGTAAATAACTAATAGCAATTCTTGTTGTACAAATCTGCGTCTATATGTATGTGCTTATCCATC 3121 16040416 0.975810479 109 2977 23191 0.954081633 2.006527163 0.095327605 0.164370394 0.299677766 3121 137 34 3553 3R:16040115-16040678 6 pnr FBtr0083221|FBtr0335427|FBtr0083220|FBtr0335426 16040311|16040311|16040311|16040311 16040915|16041796|16040915|16041796 AAGACT 6mer3-8 dme-miR-14-3p 3R + 16040276 16040522 stop_codon pnr FlyBase G32702.2 CGTCATCCAGGCAGCCAAACTGATGGCCACCTCGTAAAGTTAAAAATCTGGACACTGGCTCTGTGATGTGATCTCCTTCCTCCTCCTAAACTGCACCCTCACTTGAAGCCTTCCTTGGAATCATGGCATTGAAAAGACTTTAGACATTAGTACTACTCGGCCTTGTTTGCAATTTCGTTTAATTAAGTTTAGCTAATTGTGTGACTTTCTGAAACGTATTTTCGGAATAGCTTAGTTCTAGCTAACT 2020 16040416 0.793850014 53 1917 14765 0.950149551 1.979092901 0.083084081 0.361386139 0.571286142 2020 121 29 2859 3R:16040276-16040522 6 1215.5 3784 FBgn0003117 3353.65 145.2033333 222.1433333 0.362440923 8.371019949 5.471692451 -7 -7 -7 0.01 dme-miR-278-3p 6mer3-8 CCCACC 3R 16040803 16040808 + 3R_16040803_16040808_+ 0.999999998 1 0.999999999 0 pnr FBtr0083220|FBtr0335426|FBtr0083221|FBtr0335427 16040311|16040311|16040311|16040311 16040915|16041796|16040915|16041796 3R + 16040776 16040917 3'utr pnr FlyBase G43285.1 AAATATTTTATGAGTATTCCGCACTTCCCCACCAACCCACTTAATAGAACATTTAGCAGTTAGTCCTATGTAGAAGTCTAGAATTAATATCGTAGCTCTGATCCATTTAATATGAACGCTAAATAAAGATTGTATTAAACTA 63 16040800 0.815148863 20 59 420 0.93902439 1.187520721 0.036585366 0.238095238 0.414634146 63 1 4 77 3R:16040776-16040917 6 pnr FBtr0083221|FBtr0335427|FBtr0083220|FBtr0335426 16040311|16040311|16040311|16040311 16040915|16041796|16040915|16041796 CCCACC 6mer3-8 dme-miR-278-3p 3R + 16040780 16040916 3'utr pnr FlyBase G32705.1 ATTTTATGAGTATTCCGCACTTCCCCACCAACCCACTTAATAGAACATTTAGCAGTTAGTCCTATGTAGAAGTCTAGAATTAATATCGTAGCTCTGATCCATTTAATATGAACGCTAAATAAAGATTGTATTAAACT 58 16040800 0.772440948 24 51 373 0.870588235 1.86923172 0.094117647 0.344827586 0.552941176 58 11 0 74 3R:16040780-16040916 6 17.5 3785 FBgn0003117 3353.65 145.2033333 222.1433333 0.005218195 0.120520649 0.078777966 3 3 3 0.01 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 16046449 16046456 - 3R_16046449_16046456_- 0.625364009 0.625364009 0.625364009 0 ird5 FBtr0304804 16046345 16046579 3R - 16046408 16046484 3'utr ird5 FlyBase G51670.1 TTTGTTATTGCCCGCTTATCCAATTAATTAGCTTTATTAGTTTCATAGAATCTTTAATGTTCTCATTTGGAAACGTT 228 16046457 0.836164252 14 219 2868 0.964143426 2.383815366 0.067729084 0.087719298 0.171314741 228 9 0 242 3R:16046408-16046484 8 ird5 FBtr0304804 16046345 16046579 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R - 16046410 16046471 3'utr ird5 FlyBase G39032.1 GCTTATCCAATTAATTAGCTTTATTAGTTTCATAGAATCTTTAATGTTCTCATTTGGAAACG 141 16046457 0.8355184 10 136 1738 0.954545455 2.276461804 0.060606061 0.290780142 0.494949495 141 9 0 189 3R:16046410-16046471 8 164 3786 FBgn0024222 780.2833333 38.32666667 59.02333333 0.210180063 4.279005044 2.778562151 1 1 1 0.01 dme-miR-304-5p 8mer-A1 TGAGATTA 3R 16060192 16060199 + 3R_16060192_16060199_+ 0.625363359 0.625363359 0.625363359 0 msps FBtr0301479|FBtr0304803|FBtr0304802|FBtr0301480|FBtr0304801 16059818|16059818|16059818|16059818|16059818 16060675|16060675|16060675|16060675|16060675 3R + 16060162 16060255 3'utr msps FlyBase G43320.1 TGCGATTCAATAAGATTCGATTGGCTGAGTTGAGATTAAAGTGGCGACTGTGACTGAGACCGGGTTCCATTAGACAGCTTGTTAGTTTATGCCT 70 16060191 0.974911574 11 69 456 0.988372093 1.929418926 0.255813953 0.171428571 0.325581395 70 1 0 85 3R:16060162-16060255 8 msps FBtr0304803|FBtr0304802|FBtr0301480|FBtr0304801|FBtr0301479 16059818|16059818|16059818|16059818|16059818 16060675|16060675|16060675|16060675|16060675 TGAGATTA 8mer-A1 dme-miR-304-5p 3R + 16060152 16060256 3'utr msps FlyBase G32731.2 GTGTTTCGTATGCGATTCAATAAGATTCGATTGGCTGAGTTGAGATTAAAGTGGCGACTGTGACTGAGACCGGGTTCCATTAGACAGCTTGTTAGTTTATGCCTA 56 16060191 0.980019838 12 54 360 0.952941176 1.908485019 0.2 0.303571429 0.541176471 56 4 0 81 3R:16060152-16060256 8 34.5 3787 FBgn0027948 3925.543333 64.62 99.02333333 0.008788592 0.533890436 0.348402733 1 1 1 0.01 dme-miR-932-5p 7mer-A1 GAATTGA 3R 16103308 16103314 + 3R_16103308_16103314_+ 0.823349562 0.823349562 0.823349562 0 Akt1 FBtr0344717|FBtr0083228|FBtr0083226|FBtr0344470|FBtr0083227 16103113|16103113|16103113|16103113|16103113 16105670|16104515|16104515|16104515|16104515 3R + 16103240 16103330 3'utr Akt1 FlyBase G43341.1 ATACCATGATAACGAAGGCAAGCAAAGGGTTTTCTTGCTAGTTTATATACACCAATAATAAGAGAATTGAATTGATAGTAACTTATTTTTG 21 16103306 0.986393958 7 18 153 0.884615385 1.361727836 0.230769231 0.238095238 0.384615385 21 3 0 23 3R:16103240-16103330 7 Akt1 FBtr0083227|FBtr0344717|FBtr0083228|FBtr0083226|FBtr0344470 16103113|16103113|16103113|16103113|16103113 16104515|16105670|16104515|16104515|16104515 GAATTGA 7mer-A1 dme-miR-932-5p 3R + 16103284 16103328 3'utr Akt1 FlyBase G32751.1 ATATACACCAATAATAAGAGAATTGAATTGATAGTAACTTATTTT 16 16103306 0.984172648 5 14 113 0.869565217 1.301029996 0.130434783 0.3125 0.52173913 16 3 0 20 3R:16103284-16103328 7 15.5 3788 FBgn0010379 3175.29 102.15 156.83 0.004881444 0.151737641 0.098833131 2 2 2 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 3R 16103822 16103827 + 3R_16103822_16103827_+ 0.914640468 0.952961505 0.933800987 0.027097039 Akt1 FBtr0344717|FBtr0083228|FBtr0083226|FBtr0344470|FBtr0083227 16103113|16103113|16103113|16103113|16103113 16105670|16104515|16104515|16104515|16104515 3R + 16103792 16103846 3'utr Akt1 FlyBase G43344.1 AAGTTATATATAATGTTAAAATTGCCTCTAATGTGCTGTGCTTTATGCAAAACTA 23 16103823 0.988760011 5 23 222 1 1.414973348 0.076923077 0.130434783 0.230769231 23 0 0 26 3R:16103792-16103846 6 Akt1 FBtr0083227|FBtr0344717|FBtr0083228|FBtr0083226|FBtr0344470 16103113|16103113|16103113|16103113|16103113 16104515|16105670|16104515|16104515|16104515 ATGTGC 6mer3-8 dme-miR-305-3p 3R + 16103810 16103846 3'utr Akt1 FlyBase G32753.1 AAATTGCCTCTAATGTGCTGTGCTTTATGCAAAACTA 18 16103823 0.770886143 4 15 151 0.807692308 1.021189299 0.115384615 0.444444444 0.615384615 18 4 1 21 3R:16103810-16103846 6 19.5 3789 FBgn0010379 3175.29 102.15 156.83 0.006141171 0.190895742 0.124338456 -1 -1 -1 0.01 dme-miR-33-5p 7mer-m8 CAATGCA 3R 16103898 16103904 + 3R_16103898_16103904_+ 0.674515173 0.674515173 0.674515173 0 Akt1 FBtr0344717|FBtr0083228|FBtr0083226|FBtr0344470|FBtr0083227 16103113|16103113|16103113|16103113|16103113 16105670|16104515|16104515|16104515|16104515 3R + 16103868 16103920 3'utr Akt1 FlyBase G43345.1 TAATAGTTAATAAACGAGGGAAACATACATCAATGCAGTTTATAGGCGCCAAT 20 16103897 0.97036145 4 19 109 0.95 0.977723605 0.15 0 0 20 0 1 19 3R:16103868-16103920 7 Akt1 FBtr0083227|FBtr0344717|FBtr0083228|FBtr0083226|FBtr0344470 16103113|16103113|16103113|16103113|16103113 16104515|16105670|16104515|16104515|16104515 CAATGCA 7mer-m8 dme-miR-33-5p 3R + 16103857 16103924 3'utr Akt1 FlyBase G32753.2 AACAAACAAACTAATAGTTAATAAACGAGGGAAACATACATCAATGCAGTTTATAGGCGCCAATAATT 14 16103898 0.984969641 6 12 62 0.896551724 1.113943352 0 0.571428571 0.793103448 14 2 1 26 3R:16103857-16103924 7 14 3790 FBgn0010379 3175.29 102.15 156.83 0.004409046 0.137053353 0.089268635 1 0 0.5 0.01 dme-miR-283-5p 6mer3-8 TGATAT 3R 16149125 16149130 + 3R_16149125_16149130_+ 0.685616921 0.830651763 0.758134342 0.102555161 CG5916 FBtr0083251|FBtr0344009 16148765|16148765 16149389|16149636 3R + 16149114 16149163 3'utr CG5916 FlyBase G43358.1 AAGTTTCTAGTTGATATCTTCCGCATGTAGTCCAAATAGAGCAAGTACAT 13 16149139 0.980228681 5 13 107 1 1.204119983 0.1875 0.230769231 0.375 13 0 0 16 3R:16149114-16149163 6 CG5916 FBtr0083251|FBtr0344009 16148765|16148765 16149389|16149636 TGATAT 6mer3-8 dme-miR-283-5p 3R + 16149092 16149155 3'utr CG5916 FlyBase G32760.1 ATGCCGTAGGAGTAGTAGCCAAAAGTTTCTAGTTGATATCTTCCGCATGTAGTCCAAATAGAGC 9 16149132 0.983817658 5 8 65 0.857142857 1.079181246 0.357142857 0.555555556 0.714285714 9 2 0 12 3R:16149092-16149155 6 9 3791 FBgn0038401 127.6666667 7.303333333 11.36 0.070496084 1.232314012 0.792253521 -14 -7 -10.5 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 16149241 16149247 + 3R_16149241_16149247_+ 0.661615645 0.661615645 0.661615645 0 CG5916 FBtr0083251|FBtr0344009 16148765|16148765 16149389|16149636 3R + 16149221 16149273 3'utr CG5916 FlyBase G43359.1 TTACCCAACAACAAACATTTTGTGTTCTAAGTTATCTTGTTGATCAAAGAAGT 17 16149240 0.707334732 4 17 149 1 1.342422681 0.136363636 0.176470588 0.363636364 17 0 0 22 3R:16149221-16149273 7 CG5916 FBtr0083251|FBtr0344009 16148765|16148765 16149389|16149636 TGTGTTC 7mer-m8 dme-miR-317-3p 3R + 16149222 16149282 3'utr CG5916 FlyBase G32761.1 TACCCAACAACAAACATTTTGTGTTCTAAGTTATCTTGTTGATCAAAGAAGTATTTATTTT 17 16149240 0.98841743 6 16 152 0.96 1.380211242 0.48 0.352941176 0.56 17 1 0 24 3R:16149222-16149282 7 13.5 3792 FBgn0038401 127.6666667 7.303333333 11.36 0.105744125 1.848471018 1.188380282 1 1 1 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3R 16197053 16197059 + 3R_16197053_16197059_+ 0.521223855 0.521223855 0.521223855 0 sra FBtr0344473|FBtr0083255 16196914|16196914 16197584|16197584 3R + 16196927 16197076 3'utr sra FlyBase G43368.1 TGACGAAACTAAAGCTGAAAACCTGAGTTGTAAAACCAAACGATCGGGACAACGGGTTGGGACTCATGCTCTGCGGATGGTTGGGGCTTCGATTGAGTATTTTTTGTAAATATTTTCCGATTCAATTGTGATTAATTTACACATACATAT 91 16197052 0.822085075 21 87 770 0.964285714 1.431363764 0.026785714 0.208791209 0.357142857 91 1 3 108 3R:16196927-16197076 7 sra FBtr0344473|FBtr0083255 16196914|16196914 16197584|16197584 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 16196927 16197073 3'utr sra FlyBase G32768.1 TGACGAAACTAAAGCTGAAAACCTGAGTTGTAAAACCAAACGATCGGGACAACGGGTTGGGACTCATGCTCTGCGGATGGTTGGGGCTTCGATTGAGTATTTTTTGTAAATATTTTCCGATTCAATTGTGATTAATTTACACATACA 48 16197052 0.987946693 15 47 421 0.971428571 1.832508913 0.028571429 0.375 0.571428571 48 2 0 68 3R:16196927-16197073 7 54 3793 FBgn0086370 863.5966667 56.39333333 86.18 0.06252919 0.957559995 0.626595498 1 1 1 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 16197311 16197316 + 3R_16197311_16197316_+ 1 1 1 0 sra FBtr0344473|FBtr0083255 16196914|16196914 16197584|16197584 3R + 16197258 16197343 3'utr sra FlyBase G43369.1 TTGATGTTAAGCCATCGCAAATACCTGCTAACAATATCTACATATATCTCTGTGTACCTTCGACGGGAAATCGCTGACAGAGGCGC 58 16197310 0.966375201 5 56 377 0.972972973 1.556302501 0.189189189 0.224137931 0.391891892 58 1 1 72 3R:16197258-16197343 6 sra FBtr0344473|FBtr0083255 16196914|16196914 16197584|16197584 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 16197257 16197333 3'utr sra FlyBase G32769.1 ATTGATGTTAAGCCATCGCAAATACCTGCTAACAATATCTACATATATCTCTGTGTACCTTCGACGGGAAATCGCTG 33 16197310 0.978098323 3 30 210 0.925 1.091080469 0.225 0.212121212 0.35 33 1 2 37 3R:16197257-16197333 6 38 3794 FBgn0086370 863.5966667 56.39333333 86.18 0.044002023 0.673838515 0.440937573 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 16197550 16197555 + 3R_16197550_16197555_+ 1 0.999999999 0.999999999 0 sra FBtr0344473|FBtr0083255 16196914|16196914 16197584|16197584 3R + 16197520 16197566 3'utr sra FlyBase G43370.1 TTCAAATTCGAAATGAATGTTCTCAAATGTACCAAACAAAACAAAAT 26 16197537 0.967535914 3 25 142 1 1.51851394 0.363636364 0.24 0.424242424 25 0 0 33 3R:16197520-16197566 6 sra FBtr0344473|FBtr0083255 16196914|16196914 16197584|16197584 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 16197483 16197567 3'utr sra FlyBase G32770.1 ATGCCTACGTGTAGTTAAAATTTAAATTGAAAATATATTCAAATTCGAAATGAATGTTCTCAAATGTACCAAACAAAACAAAATG 23 16197537 0.968053673 7 22 129 1 1.544068044 0.428571429 0.454545455 0.657142857 22 0 0 35 3R:16197483-16197567 6 12 3795 FBgn0086370 863.5966667 56.39333333 86.18 0.013895376 0.21279111 0.139243444 13 13 13 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3R 16204221 16204226 - 3R_16204221_16204226_- 1 1 1 0 mtSSB FBtr0083277 16204192 16204313 3R - 16204200 16204294 3'utr mtSSB FlyBase G51704.1 AAACCTAATCTTAAGCGAAAAGTTGAACTTGCAGCATTGTAAGCATTTATAATATTCGTTGGATATATTGTGTTATCAGATTACATGCGTAGTCG 38 16204227 0.812079653 9 37 358 0.980769231 1.40654018 0.230769231 0.263157895 0.461538462 38 0 1 51 3R:16204200-16204294 6 mtSSB FBtr0083277 16204192 16204313 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 16204200 16204240 3'utr mtSSB FlyBase G39055.1 TTCGTTGGATATATTGTGTTATCAGATTACATGCGTAGTCG 21 16204227 0.754854867 3 20 223 0.964285714 1.431363764 0.357142857 0.238095238 0.428571429 21 1 0 27 3R:16204200-16204240 6 25 3796 FBgn0010438 497.9633333 116.1266667 178.4933333 0.0502045 0.215282163 0.140061253 1 1 1 0.01 dme-miR-307a-3p 8mer-A1 GGTTGTGA 3R 16259656 16259663 + 3R_16259656_16259663_+ 0.674759273 0.674981957 0.674870615 0.000157473 tara FBtr0083257|FBtr0083258 16259503|16259503 16260329|16260329 3R + 16259565 16259667 3'utr tara FlyBase G43389.1 CGCCTGCTGGCGCCCACTAGCAATTCCAAGCAGTATTGAATCGACGAAATGGGGGAGGGGCTGAGGGGATGTTAAATGCTAATTGTGCTCAGGTTGTGAACGT 21 16259658 0.962588034 8 17 89 0.75 1.255272505 0.416666667 0.047619048 0.166666667 21 6 0 18 3R:16259565-16259667 8 tara FBtr0083257|FBtr0083258 16259503|16259503 16260329|16260329 GGTTGTGA 8mer-A1 dme-miR-307a-3p 3R + 16259638 16259668 3'utr tara FlyBase G32782.1 AAATGCTAATTGTGCTCAGGTTGTGAACGTG 6 16259647 0.617252017 3 6 39 1 1.079181246 0.666666667 0.666666667 0.833333333 6 0 0 12 3R:16259638-16259668 8 6.5 3797 FBgn0040071 436.6666667 12.95666667 19.84666667 0.014885496 0.501672241 0.327510917 -2 9 3.5 0.01 dme-miR-92b-3p 6mer2-7 TGCAAT 3R 16259765 16259770 + 3R_16259765_16259770_+ 1 1 1 0 tara FBtr0083257|FBtr0083258 16259503|16259503 16260329|16260329 3R + 16259689 16259773 3'utr tara FlyBase G43390.1 CATATATTCGAAAGTCTTGGTCCTAAATACCCCTCTCCCCCTTCCTTCACACAAGCAATCGGGGACACAAATTAATTGCAATCTT 11 16259747 0.953275099 8 11 54 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 3R:16259689-16259773 6 tara FBtr0083257|FBtr0083258 16259503|16259503 16260329|16260329 TGCAAT 6mer2-7 dme-miR-92b-3p 3R + 16259737 16259773 3'utr tara FlyBase G32783.2 ACACAAGCAATCGGGGACACAAATTAATTGCAATCTT 5 16259760 0.81511877 3 3 19 0.777777778 0.84509804 0 0.2 0.555555556 5 2 0 7 3R:16259737-16259773 6 3.5 3798 FBgn0040071 436.6666667 12.95666667 19.84666667 0.008015267 0.270131207 0.176352032 18 5 11.5 0.01 dme-miR-1003-3p 7mer-m8 ATGTGAG 3R 16261385 16261391 - 3R_16261385_16261391_- 0.671796207 0.671796207 0.671796207 0 bor FBtr0305998|FBtr0083276 16261353|16261353 16261833|16261833 3R - 16261380 16261442 3'utr bor FlyBase G51707.1 AACTTCTCGCTGGCTCTTCCACCAATTTCACTTGTCCGCAGTGTTTCCTATATGTGAGTATGA 9 16261392 0.991699553 7 8 82 0.8125 1.113943352 0 0.333333333 0.625 9 3 0 13 3R:16261380-16261442 7 bor FBtr0305998|FBtr0083276 16261353|16261353 16261833|16261833 ATGTGAG 7mer-m8 dme-miR-1003-3p 3R - 16261376 16261413 3'utr bor FlyBase G39057.1 ACTTGTCCGCAGTGTTTCCTATATGTGAGTATGAAGTA 7 16261394 0.63094883 5 6 58 1 0.954242509 0.333333333 0.285714286 0.444444444 7 0 0 9 3R:16261376-16261413 7 6 3799 FBgn0040237 972.07 49.02666667 75.33333333 0.006172395 0.122382377 0.079646018 1 3 2 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 16261629 16261635 - 3R_16261629_16261635_- 0.661615645 0.661615645 0.661615645 0 bor FBtr0305998|FBtr0083276 16261353|16261353 16261833|16261833 3R - 16261599 16261653 3'utr bor FlyBase G51710.1 TAATCGTTGGCGGGAAGATGTGTTCGTCTATAGATACAATTAAGTTTGACCCACA 17 16261635 0.981362043 6 17 122 1 1.255272505 0.222222222 0.058823529 0.111111111 17 0 0 18 3R:16261599-16261653 7 bor FBtr0305998|FBtr0083276 16261353|16261353 16261833|16261833 TGTGTTC 7mer-m8 dme-miR-317-3p 3R - 16261614 16261657 3'utr bor FlyBase G39060.1 TACATAATCGTTGGCGGGAAGATGTGTTCGTCTATAGATACAAT 17 16261635 0.875882511 3 16 126 0.961538462 1.397940009 0.461538462 0.411764706 0.615384615 17 1 0 25 3R:16261614-16261657 7 16 3800 FBgn0040237 972.07 49.02666667 75.33333333 0.01645972 0.326353005 0.212389381 0 0 0 0.01 dme-miR-277-3p 6mer3-8 TGCATT 3R 16261793 16261798 - 3R_16261793_16261798_- 1 1 1 0 bor FBtr0305998|FBtr0083276 16261353|16261353 16261833|16261833 3R - 16261670 16261836 stop_codon bor FlyBase G51711.1 TAAAGCGCGGAGGAACCGATGCTGAAGTAGATGCAACCTGCATTCAAAACTTGTTTAGTTTTCTAATCACTTAACTTTAAGTTGGTACGCACAGGGCTTTATCTTACTAACGACCACCAACCAGCAGCCGAGACACCAAAATAGTGCATATCGGTTACGTGTATGCA 47 16261776 0.984649236 13 46 362 0.98245614 1.748188027 0.280701754 0.212765957 0.350877193 47 1 0 56 3R:16261670-16261836 6 bor FBtr0305998|FBtr0083276 16261353|16261353 16261833|16261833 TGCATT 6mer3-8 dme-miR-277-3p 3R - 16261731 16261839 stop_codon bor FlyBase G39061.1 CTGTAAAGCGCGGAGGAACCGATGCTGAAGTAGATGCAACCTGCATTCAAAACTTGTTTAGTTTTCTAATCACTTAACTTTAAGTTGGTACGCACAGGGCTTTATCTTA 32 16261776 0.977265461 12 31 205 0.983333333 1.469822016 0.233333333 0.53125 0.75 32 0 1 59 3R:16261731-16261839 6 6.5 3801 FBgn0040237 972.07 49.02666667 75.33333333 0.006686761 0.132580908 0.086283186 -22 -22 -22 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 16266854 16266859 + 3R_16266854_16266859_+ 0.999999981 0.999999257 0.999999619 4.95E-07 asun FBtr0083259 16266545 16266891 3R + 16266834 16266866 3'utr asun FlyBase G43394.1 TTTTTTTTAACTTGTGATTGTGATCTTTGGCAC 9 16266852 0.653972491 3 7 100 0.8 0.602059991 0.3 0.111111111 0.2 9 1 1 8 3R:16266834-16266866 6 asun FBtr0083259 16266545 16266891 TGATCT 6mer3-8 dme-bantam-3p 3R + 16266838 16266870 3'utr asun FlyBase G32785.1 TTTTAACTTGTGATTGTGATCTTTGGCACGGTA 6 16266853 0.67946575 4 6 59 1 0.903089987 0.25 0.333333333 0.5 6 0 0 8 3R:16266838-16266870 6 7.5 3802 FBgn0020407 250 12.17666667 18.69333333 0.03 0.615932111 0.401212553 2 1 1.5 0.01 dme-miR-263a-5p 6mer3-8 GTGCCA 3R 16301924 16301929 + 3R_16301924_16301929_+ 1 1 1 0 gish FBtr0083263|FBtr0305072|FBtr0100333|FBtr0083261|FBtr0083265|FBtr0334606|FBtr0305071|FBtr0301304|FBtr0083262|FBtr0100332|FBtr0083264 16301873|16301873|16301873|16301873|16301873|16301873|16301873|16301873|16301873|16301873|16301873 16302721|16302372|16302372|16302372|16302372|16304768|16302372|16302372|16302372|16302372|16302372 3R + 16301917 16301965 3'utr gish FlyBase G43410.1 CTGCTGCGTGCCACTTCACATTCAAACTCACGGGATAGCGTATTGAATA 13 16301937 0.963491581 3 12 66 1 1.113943352 0.230769231 0 0 13 0 0 13 3R:16301917-16301965 6 gish FBtr0083262|FBtr0100332|FBtr0083264|FBtr0305072|FBtr0083261|FBtr0334606|FBtr0100333|FBtr0083265|FBtr0301304|FBtr0305071|FBtr0083263 16301873|16301873|16301873|16301873|16301873|16301873|16301873|16301873|16301873|16301873|16301873 16302372|16302372|16302372|16302372|16302372|16304768|16302372|16302372|16302372|16302372|16302721 GTGCCA 6mer3-8 dme-miR-263a-5p 3R + 16301914 16301959 3'utr gish FlyBase G32801.1 ACCCTGCTGCGTGCCACTTCACATTCAAACTCACGGGATAGCGTAT 6 16301937 0.94879842 2 6 31 1 1 0.5 0.5 0.7 6 0 0 10 3R:16301914-16301959 6 5.5 3803 FBgn0250823 3945.283333 157.2966667 241.69 0.00139407 0.034965776 0.022756424 -13 -13 -13 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 16302429 16302435 + 3R_16302429_16302435_+ 0.658999527 0.658999527 0.658999527 0 gish FBtr0083263|FBtr0334606 16301873|16301873 16302721|16304768 3R + 16302392 16302496 3'utr gish FlyBase G43414.1 CGACACGGCGACTCAAGCCAGAATCACTCACAGCCAGGGCAGCTCCTCCCGTTGGTGTCTTGTGAAGGGAGTCGGAATGAAAGCTCCCCAAAATCACTACCACTA 42 16302438 0.95102881 9 34 147 0.823529412 1.62324929 0.215686275 0.166666667 0.31372549 42 9 0 42 3R:16302392-16302496 7 gish FBtr0334606|FBtr0083263 16301873|16301873 16304768|16302721 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 16302406 16302450 3'utr gish FlyBase G32805.1 AAGCCAGAATCACTCACAGCCAGGGCAGCTCCTCCCGTTGGTGTC 16 16302438 0.677728476 4 14 49 0.954545455 1.322219295 0.181818182 0.25 0.454545455 16 1 0 21 3R:16302406-16302450 7 25 3804 FBgn0250823 3945.283333 157.2966667 241.69 0.006336681 0.158935345 0.103438289 -9 -9 -9 0.01 dme-miR-190-5p 6mer3-8 ACATAT 3R 16302642 16302647 + 3R_16302642_16302647_+ 1 1 1 0 gish FBtr0083263|FBtr0334606 16301873|16301873 16302721|16304768 3R + 16302570 16302656 3'utr gish FlyBase G43415.1 TATATATTATATACATATTAAAAGAGACAACAAACAAAACTAGTGCAGCATCATTTAATGAGAGAAGGAAGAACATATTTATACGCA 9 16302627 0.962556794 7 9 46 1 1 0 0.111111111 0.2 9 0 0 10 3R:16302570-16302656 6 gish FBtr0334606|FBtr0083263 16301873|16301873 16304768|16302721 ACATAT 6mer3-8 dme-miR-190-5p 3R + 16302622 16302681 3'utr gish FlyBase G32807.1 ATTTAATGAGAGAAGGAAGAACATATTTATACGCAACCAACAAACTTGTAAATTATAATG 8 16302647 0.832628971 6 7 39 0.909090909 0.698970004 0.181818182 0.375 0.545454545 8 0 1 10 3R:16302622-16302681 6 5 3805 FBgn0250823 3945.283333 157.2966667 241.69 0.001267336 0.031787069 0.020687658 15 -5 5 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 16303469 16303475 + 3R_16303469_16303475_+ 0.658999527 0.658999527 0.658999527 0 gish FBtr0334606 16301873 16304768 3R + 16303447 16303492 3'utr gish FlyBase G43416.1 AGATATACAGTATGAATCAATAGGCAGCTTGGTTTAGCTCTGTTTT 20 16303467 0.936824512 2 19 151 0.961538462 1.397940009 0.076923077 0.25 0.423076923 20 1 0 25 3R:16303447-16303492 7 gish FBtr0334606 16301873 16304768 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 16303455 16303490 3'utr gish FlyBase G32809.1 AGTATGAATCAATAGGCAGCTTGGTTTAGCTCTGTT 19 16303467 0.930434057 2 19 123 1 1.361727836 0.043478261 0.157894737 0.304347826 19 0 0 23 3R:16303455-16303490 7 19.5 3806 FBgn0250823 3945.283333 157.2966667 241.69 0.004942611 0.123969569 0.080681865 2 2 2 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3R 16311062 16311067 - 3R_16311062_16311067_- 0.678411463 0.793121249 0.735766356 0.081112007 Sulf1 FBtr0334699|FBtr0083273|FBtr0334700 16310540|16310540|16310540 16311180|16311180|16311180 3R - 16311047 16311155 3'utr Sulf1 FlyBase G51728.1 ACATATCCAATGCGTATCCTTTGTACCTTGCTTGCCCGCTTCTAATCTTTGGTTTGCCCCATTTAATGTTTTCATACATAAATAAGACTGTGTTTTAATCTATATTCGT 126 16311064 0.688923571 17 117 1143 0.939189189 2.1430148 0.27027027 0.134920635 0.263513514 126 9 0 139 3R:16311047-16311155 6 Sulf1 FBtr0334700|FBtr0083273|FBtr0334699 16310540|16310540|16310540 16311180|16311180|16311180 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 16311048 16311091 3'utr Sulf1 FlyBase G39072.1 AATGTTTTCATACATAAATAAGACTGTGTTTTAATCTATATTCG 62 16311064 0.651622545 8 56 492 0.896551724 1.591064607 0.022988506 0.322580645 0.517241379 62 8 1 78 3R:16311048-16311091 6 63 3807 FBgn0040271 314.1 7.876666667 12.08 0.200573066 7.998307237 5.215231788 -3 -3 -3 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 16311128 16311133 - 3R_16311128_16311133_- 1 1 1 0 Sulf1 FBtr0334699|FBtr0083273|FBtr0334700 16310540|16310540|16310540 16311180|16311180|16311180 3R - 16311047 16311155 3'utr Sulf1 FlyBase G51728.1 ACATATCCAATGCGTATCCTTTGTACCTTGCTTGCCCGCTTCTAATCTTTGGTTTGCCCCATTTAATGTTTTCATACATAAATAAGACTGTGTTTTAATCTATATTCGT 126 16311134 0.688923571 17 117 1143 0.939189189 2.1430148 0.27027027 0.134920635 0.263513514 126 9 0 139 3R:16311047-16311155 6 Sulf1 FBtr0334700|FBtr0083273|FBtr0334699 16310540|16310540|16310540 16311180|16311180|16311180 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 16311105 16311152 3'utr Sulf1 FlyBase G39073.1 TATCCAATGCGTATCCTTTGTACCTTGCTTGCCCGCTTCTAATCTTTG 30 16311134 0.659523187 7 28 303 0.936170213 1.643452676 0.574468085 0.466666667 0.659574468 30 3 0 44 3R:16311105-16311152 6 45.5 3808 FBgn0040271 314.1 7.876666667 12.08 0.144858325 5.776555226 3.766556291 1 1 1 0.01 dme-miR-970-3p 6mer3-8 TCTTAT 3R 16340223 16340228 - 3R_16340223_16340228_- 1 1 1 0 SF2 FBtr0083272|FBtr0304727 16340125|16338941 16340653|16340653 3R - 16340175 16340235 3'utr SF2 FlyBase G51732.1 TTATAACTCTTATTTTGGCTGCACGTTTTCCAAGCTAATTTATTAGAATCTACCTTAACGA 12 16340221 0.72413579 8 12 118 1 1.146128036 0 0.083333333 0.214285714 12 0 0 14 3R:16340175-16340235 6 SF2 FBtr0083272|FBtr0304727 16340125|16338941 16340653|16340653 TCTTAT 6mer3-8 dme-miR-970-3p 3R - 16340205 16340233 3'utr SF2 FlyBase G39075.1 ATAACTCTTATTTTGGCTGCACGTTTTCC 5 16340221 0.696935597 4 5 47 1 0.698970004 0 0 0 5 0 0 5 3R:16340205-16340233 6 6 3809 FBgn0040284 2524.346667 202.5 310.52 0.002376853 0.02962963 0.019322427 -7 -7 -7 0.01 dme-miR-278-3p 6mer2-7 CCACCG 3R 16340374 16340379 - 3R_16340374_16340379_- 1 1 1 0 SF2 FBtr0083272|FBtr0304727 16340125|16338941 16340653|16340653 3R - 16340370 16340440 3'utr SF2 FlyBase G51733.1 CACTTGCTTTTCCAACTTATCACACGTTCTAAGAAGCAGAAATGTTCTCTTAAGTTATAATCCACCGGGCA 7 16340391 0.978011792 5 7 52 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 3R:16340370-16340440 6 SF2 FBtr0083272|FBtr0304727 16340125|16338941 16340653|16340653 CCACCG 6mer2-7 dme-miR-278-3p 3R - 16340368 16340416 3'utr SF2 FlyBase G39077.1 CGTTCTAAGAAGCAGAAATGTTCTCTTAAGTTATAATCCACCGGGCAAA 8 16340391 0.973571577 3 8 56 1 1.079181246 0 0.375 0.583333333 8 0 0 12 3R:16340368-16340416 6 2 3810 FBgn0040284 2524.346667 202.5 310.52 0.000792284 0.009876543 0.006440809 12 12 12 0.01 dme-miR-317-5p 6mer3-8 GTATCC 3R 16345443 16345448 + 3R_16345443_16345448_+ 0.985561162 0.99999987 0.992780516 0.010209703 pad FBtr0301514 16345403 16345829 3R + 16345407 16345551 3'utr pad FlyBase G43431.1 AGTCCTTAAGCTCGAAAAGTGAATCCACCTTACCTCGTATCCTAGTCCGCGGTCTATTCCAACATCTGGTCGCCAGTTCCTTGTATTGTATAGTTTTCGGTAAATTTTCCTTTTAATTTTCTTTGTGCAATATTATTTATAGCAA 66 16345446 0.844306844 20 61 588 0.906666667 1.531478917 0.066666667 0.136363636 0.24 66 6 1 68 3R:16345407-16345551 6 pad FBtr0301514 16345403 16345829 GTATCC 6mer3-8 dme-miR-317-5p 3R + 16345398 16345464 stop_codon pad FlyBase G32816.1 AAAGTAATTAGTCCTTAAGCTCGAAAAGTGAATCCACCTTACCTCGTATCCTAGTCCGCGGTCTATT 27 16345445 0.986547304 9 24 177 0.861111111 1.491361694 0.027777778 0.259259259 0.444444444 27 5 0 31 3R:16345398-16345464 6 25.5 3811 FBgn0038418 118 4.38 6.753333333 0.216101695 5.821917808 3.775913129 -3 -2 -2.5 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 16345740 16345745 + 3R_16345740_16345745_+ 0.999998483 0.999999805 0.999999144 9.19E-07 pad FBtr0301514 16345403 16345829 3R + 16345708 16345812 3'utr pad FlyBase G43432.1 GTAAATATCTGTGTATCTATTATGTATGTACAAGCTGTAGCTGTAAACAATGGTAAAAATACCTTTTTTGGGTGAAGAAAATGATTCCATTGCAAAAATAAATAT 34 16345743 0.967865666 6 33 186 1 1.602059991 0.15 0.117647059 0.25 34 0 0 40 3R:16345708-16345812 6 pad FBtr0301514 16345403 16345829 AGCTGT 6mer3-8 dme-miR-1008-3p 3R + 16345729 16345803 3'utr pad FlyBase G32818.2 ATGTATGTACAAGCTGTAGCTGTAAACAATGGTAAAAATACCTTTTTTGGGTGAAGAAAATGATTCCATTGCAAA 26 16345743 0.976712977 4 23 133 0.930232558 1.124938737 0.069767442 0.461538462 0.674418605 26 1 2 40 3R:16345729-16345803 6 25 3812 FBgn0038418 118 4.38 6.753333333 0.211864407 5.707762557 3.701875617 -3 -3 -3 0.01 dme-miR-1006-3p 8mer-A1 CGAATTTA 3R 16350969 16350976 - 3R_16350969_16350976_- 0.671697512 0.671697512 0.671697512 0 CG10311 FBtr0083324|FBtr0345202 16350904|16350784 16351129|16351129 3R - 16350916 16351061 3'utr CG10311 FlyBase G51743.1 TCCTAGCTTCCTATGTTCGTTTTTAGTGATTATGTCTAACTAATAATTATAATTTAGTTGAGGCGAGCCAGCCCTTCGCTCACATCGAATTTACGCGGCCCGTGGCATTAAGTGCAATGGAATTATGTATTTAACATTTAAATAAA 17 16350977 0.986917487 9 14 128 0.888888889 1.204119983 0 0.058823529 0.111111111 17 2 0 16 3R:16350916-16351061 8 CG10311 FBtr0345202|FBtr0083324 16350784|16350904 16351129|16351129 CGAATTTA 8mer-A1 dme-miR-1006-3p 3R - 16350926 16351004 3'utr CG10311 FlyBase G39084.1 TTGAGGCGAGCCAGCCCTTCGCTCACATCGAATTTACGCGGCCCGTGGCATTAAGTGCAATGGAATTATGTATTTAACA 19 16350977 0.971104192 9 16 95 0.793103448 1.361727836 0.310344828 0.421052632 0.620689655 19 6 0 23 3R:16350926-16351004 8 8.5 3813 FBgn0038420 2 0.253333333 0.403333333 4.25 33.55263158 21.07438017 1 1 1 0.01 dme-miR-277-3p 6mer3-8 TGCATT 3R 16351095 16351100 - 3R_16351095_16351100_- 1 1 1 0 CG10311 FBtr0083324|FBtr0345202 16350904|16350784 16351129|16351129 3R - 16351087 16351146 stop_codon CG10311 FlyBase G51744.1 AGCCGTACCGTCGCTAGAATCTCCAGGAGCACTATTCATCAGAAATTGCATTCAAGAAGC 17 16351101 0.758804996 6 17 79 1 1.278753601 0 0.117647059 0.210526316 17 0 0 19 3R:16351087-16351146 6 CG10311 FBtr0345202|FBtr0083324 16350784|16350904 16351129|16351129 TGCATT 6mer3-8 dme-miR-277-3p 3R - 16351087 16351115 3'utr CG10311 FlyBase G39085.1 CTATTCATCAGAAATTGCATTCAAGAAGC 8 16351101 0.82017376 2 7 41 1 1.041392685 0 0.375 0.545454545 8 0 0 11 3R:16351087-16351115 6 9 3814 FBgn0038420 2 0.253333333 0.403333333 4.5 35.52631579 22.31404959 1 1 1 0.01 dme-miR-184-5p 6mer3-8 TGATAA 3R 16357994 16357999 - 3R_16357994_16357999_- 1 1 1 0 CG17931 FBtr0332177|FBtr0345208 16357608|16357533 16358541|16358541 3R - 16357988 16358023 3'utr CG17931 FlyBase G51747.1 CGCCGAAGAGAGAGATATAAAGATTGATAATCCCAG 12 16358006 0.963047867 4 11 56 0.923076923 1.079181246 0.307692308 0.083333333 0.153846154 12 1 0 12 3R:16357988-16358023 6 CG17931 FBtr0345208|FBtr0332177 16357533|16357608 16358541|16358541 TGATAA 6mer3-8 dme-miR-184-5p 3R - 16357985 16358029 3'utr CG17931 FlyBase G39089.1 TATGGTCGCCGAAGAGAGAGATATAAAGATTGATAATCCCAGAGC 5 16358006 0.975521942 3 4 27 0.833333333 0.698970004 0.166666667 0.2 0.333333333 5 1 0 5 3R:16357985-16358029 6 8.5 3815 FBgn0038421 429.6933333 71.91666667 110.2133333 0.01978155 0.118192352 0.077123155 7 7 7 0.01 dme-miR-283-5p 7mer-A1 GATATTA 3R 16358359 16358365 - 3R_16358359_16358365_- 0.782911824 0.782911824 0.782911824 0 CG17931 FBtr0332177|FBtr0345208|FBtr0083323 16357608|16357533|16358138 16358541|16358541|16358541 3R - 16358148 16358383 3'utr CG17931 FlyBase G51748.1 TGTATACAACTACGCATAGATATTACCGGGCTGTACAGCACGCGACATAGCAATAGCAATAGCAAGTGCCACCCAAGGACTTCGATTCTGTTCCGGTTTTTGTTCATTTTCGTTTGCAGTGCTGCTGTACGATAATTAAGTAATCTTACATTTTATTTCTCCACCTACCTGACTAAATTATTTACTGTAATGTATATATATAAATTTTCAAATAAAACATAATATGCAGCCGACAG 233 16358361 0.897830772 39 216 1412 0.919413919 1.320492475 0.124542125 0.141630901 0.267399267 233 11 11 251 3R:16358148-16358383 7 CG17931 FBtr0083323|FBtr0345208|FBtr0332177 16358138|16357533|16357608 16358541|16358541|16358541 GATATTA 7mer-A1 dme-miR-283-5p 3R - 16358240 16358378 3'utr CG17931 FlyBase G39091.1 ACAACTACGCATAGATATTACCGGGCTGTACAGCACGCGACATAGCAATAGCAATAGCAAGTGCCACCCAAGGACTTCGATTCTGTTCCGGTTTTTGTTCATTTTCGTTTGCAGTGCTGCTGTACGATAATTAAGTAAT 85 16358352 0.74668833 15 80 465 0.937984496 2.08278537 0.108527132 0.458823529 0.643410853 85 8 0 121 3R:16358240-16358378 7 89 3816 FBgn0038421 429.6933333 71.91666667 110.2133333 0.207124461 1.237543453 0.8075248 -4 -13 -8.5 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 3R 16358498 16358504 - 3R_16358498_16358504_- 0.620204266 0.620204266 0.620204266 0 CG17931 FBtr0332177|FBtr0345208|FBtr0083323 16357608|16357533|16358138 16358541|16358541|16358541 3R - 16358386 16358546 stop_codon CG17931 FlyBase G51749.1 AATAGTCAACCCACTGGCTTGATAGAGATCTGGACTCCCGGTTGCATTTCCGGACAGGTTAGGCTTATAGTCAGTCGTTCGTCAGCCAAGACCCCGATTCGCCCAAGGACCTAGGATAGTTGGTTAGAATGTACATGAAGCAACATACATAATTCACGAGA 3039 16358516 0.924702003 29 2995 18875 0.986331939 2.247482261 0.130543933 0.152023692 0.281171548 3039 30 19 3536 3R:16358386-16358546 7 CG17931 FBtr0083323|FBtr0345208|FBtr0332177 16358138|16357533|16357608 16358541|16358541|16358541 TGCATTT 7mer-m8 dme-miR-277-3p 3R - 16358396 16358545 stop_codon CG17931 FlyBase G39092.1 ATAGTCAACCCACTGGCTTGATAGAGATCTGGACTCCCGGTTGCATTTCCGGACAGGTTAGGCTTATAGTCAGTCGTTCGTCAGCCAAGACCCCGATTCGCCCAAGGACCTAGGATAGTTGGTTAGAATGTACATGAAGCAACATACATA 1826 16358516 0.920803354 24 1799 11183 0.982469228 2.64246452 0.107795599 0.331872946 0.544945916 1826 42 5 2634 3R:16358396-16358545 7 1809.5 3817 FBgn0038421 429.6933333 71.91666667 110.2133333 4.211142831 25.16106605 16.41815872 12 12 12 0.01 dme-miR-252-5p 7mer-m8 GTACTTA 3R 16434643 16434649 + 3R_16434643_16434649_+ 0.588299917 0.588299917 0.588299917 0 CG17565 FBtr0083286 16434515 16434740 3R + 16434624 16434668 3'utr CG17565 FlyBase G43447.1 TTTCGCTTCTTGTATAAATGTACTTATTGGAAAAGGAATTGATTA 14 16434642 0.987908723 4 14 131 1 1.204119983 0.1875 0.071428571 0.1875 14 0 0 16 3R:16434624-16434668 7 CG17565 FBtr0083286 16434515 16434740 GTACTTA 7mer-m8 dme-miR-252-5p 3R + 16434616 16434661 3'utr CG17565 FlyBase G32828.1 ATTGTATTTTTCGCTTCTTGTATAAATGTACTTATTGGAAAAGGAA 17 16434642 0.986627752 3 16 140 0.954545455 1.322219295 0.227272727 0.235294118 0.409090909 17 1 0 21 3R:16434616-16434661 7 15.5 3818 FBgn0038424 261 20.12666667 30.60666667 0.059386973 0.770122557 0.506425615 1 1 1 0.01 dme-miR-8-3p 6mer2-7 AGTATT 3R 16445741 16445746 - 3R_16445741_16445746_- 1 1 1 0 Pak3 FBtr0330047|FBtr0305003 16445005|16445005 16451158|16451200 3R - 16445725 16445762 3'utr Pak3 FlyBase G51780.1 AAGGCAACGAACGGATAGTATTTTGGGGCAGTAGAAAC 10 16445746 0.97352246 2 9 55 0.916666667 1.041392685 0.333333333 0.2 0.333333333 10 1 0 11 3R:16445725-16445762 6 Pak3 FBtr0330047|FBtr0305003 16445005|16445005 16451158|16451200 AGTATT 6mer2-7 dme-miR-8-3p 3R - 16445730 16445763 3'utr Pak3 FlyBase G39112.1 CAAGGCAACGAACGGATAGTATTTTGGGGCAGTA 9 16445740 0.975775387 3 8 52 0.866666667 0.636822098 0 0.666666667 0.8 9 0 2 13 3R:16445730-16445763 6 9.5 3819 FBgn0044826 2696.55 65.35333333 100.3933333 0.00352302 0.145363664 0.094627797 0 -6 -3 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3R 16446862 16446868 - 3R_16446862_16446868_- 0.521223855 0.521223855 0.521223855 0 Pak3 FBtr0330047|FBtr0083312|FBtr0305003 16445005|16446744|16445005 16451158|16451200|16451200 3R - 16446820 16447121 3'utr Pak3 FlyBase G51784.1 GGACAGAGAGATGAGCAGGGGCCGAAAAACTCGAAGGAAACCGTCGCCAAACCGTGGATCCATATCGCATCGCTCGAGCAGTTCATCGATGGCAGGGGGGCGGGGTTATCGCTTAGATTAGATTGTCCTATGGCAAATTAGCTTACTTCAACAACGCACACAAACACGCACATATGATATACATAGATACTGTATTATTAAATGTAGGGACATAAGTTTGATTACTCTTTATATACCCGTATATATACATAATTGTGATTTAAGCGATTTTATCAAATCAGCATTATGCGACTCTTTATAAA 195 16446844 0.985377625 40 186 1526 0.960352423 1.861335239 0.145374449 0.138461538 0.259911894 195 7 2 218 3R:16446820-16447121 7 Pak3 FBtr0330047|FBtr0083312|FBtr0305003 16445005|16446744|16445005 16451158|16451200|16451200 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 16446798 16446902 3'utr Pak3 FlyBase G39114.1 GATTACTCTTTATATACCCGTATATATACATAATTGTGATTTAAGCGATTTTATCAAATCAGCATTATGCGACTCTTTATAAAATTCGTCGTAGTCAGTAAGTGC 46 16446862 0.984882078 10 44 400 0.971830986 1.838849091 0.070422535 0.413043478 0.61971831 46 2 0 69 3R:16446798-16446902 7 43 3820 FBgn0044826 2696.55 65.35333333 100.3933333 0.015946302 0.657961848 0.428315293 -24 -6 -15 0.01 dme-miR-305-5p 6mer2-7 GTACAA 3R 16451021 16451026 - 3R_16451021_16451026_- 1 1 1 0 Pak3 FBtr0330047|FBtr0083312|FBtr0305003 16445005|16446744|16445005 16451158|16451200|16451200 3R - 16451018 16451090 5'utr Pak3 FlyBase G51785.1 GTTTTGTGTGGACGAAACCGGAACTGGAACTGGAATAGAATGCTGACCGTAGTCTTTGTAGTATGTACAACCG 15 16451035 0.716082658 9 13 87 0.888888889 1.204119983 0.166666667 0.133333333 0.277777778 15 2 0 16 3R:16451018-16451090 6 Pak3 FBtr0330047|FBtr0083312|FBtr0305003 16445005|16446744|16445005 16451158|16451200|16451200 GTACAA 6mer2-7 dme-miR-305-5p 3R - 16451023 16451086 5'utr Pak3 FlyBase G39115.1 TGTGTGGACGAAACCGGAACTGGAACTGGAATAGAATGCTGACCGTAGTCTTTGTAGTATGTAC 18 16451035 0.92171435 9 17 110 0.958333333 1.06069784 0.208333333 0.277777778 0.458333333 18 0 1 23 3R:16451023-16451086 3 2 3821 FBgn0044826 2696.55 65.35333333 100.3933333 0.000741688 0.030602877 0.019921642 9 9 9 0.01 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 16457729 16457736 + 3R_16457729_16457736_+ 0.625364269 0.625364269 0.625364269 0 CG14883 FBtr0083291 16457662 16458233 3R + 16457716 16457917 3'utr CG14883 FlyBase G43455.1 TACACAAACTGTTTGCATTTAGCTGGCAGAGCTTAGCCCTTAAGACAAACTTAAGTACGCATGTGTTTTTGTAGAAGCTTTAGAAAGTATTATCCCAAGCTTACCGGTACCAGTGAAATGGAAGATATAATTTAGATAGTTTATGTGCTTTACTTTTGTTTACCTGAAGCTTTTATTCATTTTATTGACGTCCTAATTTATT 210 16457728 0.876746571 28 204 1817 0.971428571 2.376576957 0.155102041 0.142857143 0.265306122 210 7 0 238 3R:16457716-16457917 8 CG14883 FBtr0083291 16457662 16458233 TGCATTTA 8mer-A1 dme-miR-277-3p 3R + 16457653 16457756 stop_codon CG14883 FlyBase G32834.1 TGAAAGCCTAAGAGTCCTTCAGGATTTGAACGAACGATAACGACTTAGATCGACGCACACACATACACAAACTGTTTGCATTTAGCTGGCAGAGCTTAGCCCTT 53 16457728 0.984126712 11 50 389 0.935064935 1.556302501 0.220779221 0.320754717 0.532467532 53 4 1 72 3R:16457653-16457756 8 51 3822 FBgn0038432 123 8.256666667 12.72666667 0.414634146 6.176826807 4.007333683 1 1 1 0.01 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 3R 16457876 16457882 + 3R_16457876_16457882_+ 0.823349562 0.823349562 0.823349562 0 CG14883 FBtr0083291 16457662 16458233 3R + 16457716 16457917 3'utr CG14883 FlyBase G43455.1 TACACAAACTGTTTGCATTTAGCTGGCAGAGCTTAGCCCTTAAGACAAACTTAAGTACGCATGTGTTTTTGTAGAAGCTTTAGAAAGTATTATCCCAAGCTTACCGGTACCAGTGAAATGGAAGATATAATTTAGATAGTTTATGTGCTTTACTTTTGTTTACCTGAAGCTTTTATTCATTTTATTGACGTCCTAATTTATT 210 16457874 0.876746571 28 204 1817 0.971428571 2.376576957 0.155102041 0.142857143 0.265306122 210 7 0 238 3R:16457716-16457917 7 CG14883 FBtr0083291 16457662 16458233 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R + 16457849 16457918 3'utr CG14883 FlyBase G32836.1 AGATAGTTTATGTGCTTTACTTTTGTTTACCTGAAGCTTTTATTCATTTTATTGACGTCCTAATTTATTG 59 16457900 0.799858843 10 57 618 0.975 1.591064607 0.05 0.271186441 0.4625 59 1 1 78 3R:16457849-16457918 7 38 3823 FBgn0038432 123 8.256666667 12.72666667 0.308943089 4.602341542 2.985856469 2 -24 -11 0.01 dme-miR-13b-2-5p 6mer2-7 TTGACG 3R 16457900 16457905 + 3R_16457900_16457905_+ 0.999951943 1 0.999975971 3.40E-05 CG14883 FBtr0083291 16457662 16458233 3R + 16457716 16457917 3'utr CG14883 FlyBase G43455.1 TACACAAACTGTTTGCATTTAGCTGGCAGAGCTTAGCCCTTAAGACAAACTTAAGTACGCATGTGTTTTTGTAGAAGCTTTAGAAAGTATTATCCCAAGCTTACCGGTACCAGTGAAATGGAAGATATAATTTAGATAGTTTATGTGCTTTACTTTTGTTTACCTGAAGCTTTTATTCATTTTATTGACGTCCTAATTTATT 210 16457874 0.876746571 28 204 1817 0.971428571 2.376576957 0.155102041 0.142857143 0.265306122 210 7 0 238 3R:16457716-16457917 6 CG14883 FBtr0083291 16457662 16458233 TTGACG 6mer2-7 dme-miR-13b-2-5p 3R + 16457849 16457918 3'utr CG14883 FlyBase G32836.1 AGATAGTTTATGTGCTTTACTTTTGTTTACCTGAAGCTTTTATTCATTTTATTGACGTCCTAATTTATTG 59 16457900 0.799858843 10 57 618 0.975 1.591064607 0.05 0.271186441 0.4625 59 1 1 78 3R:16457849-16457918 6 29.5 3824 FBgn0038432 123 8.256666667 12.72666667 0.239837398 3.572870408 2.317967522 26 0 13 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 16458164 16458169 + 3R_16458164_16458169_+ 1 1 1 0 CG14883 FBtr0083291 16457662 16458233 3R + 16458135 16458252 3'utr CG14883 FlyBase G43458.1 GTTTACCAGCATTATATGTATATGTCTATACCAAAAACCAGAATTAAAAACTACTTTTATTGTGATTATAAAAGAAAATAAAGATGATTGCAACGATTGATTTAAGTTCATACACCTG 33 16458163 0.955762528 13 30 236 0.9 1.255272505 0.275 0.181818182 0.325 33 3 1 36 3R:16458135-16458252 6 CG14883 FBtr0083291 16457662 16458233 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 16458150 16458209 3'utr CG14883 FlyBase G32839.1 ATGTATATGTCTATACCAAAAACCAGAATTAAAAACTACTTTTATTGTGATTATAAAAGA 9 16458163 0.917966287 5 9 67 1 1.079181246 0.25 0.222222222 0.416666667 9 0 0 12 3R:16458150-16458209 6 9 3825 FBgn0038432 123 8.256666667 12.72666667 0.073170732 1.09002826 0.707176532 1 1 1 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3R 16458195 16458201 + 3R_16458195_16458201_+ 0.521223855 0.521223855 0.521223855 0 CG14883 FBtr0083291 16457662 16458233 3R + 16458135 16458252 3'utr CG14883 FlyBase G43458.1 GTTTACCAGCATTATATGTATATGTCTATACCAAAAACCAGAATTAAAAACTACTTTTATTGTGATTATAAAAGAAAATAAAGATGATTGCAACGATTGATTTAAGTTCATACACCTG 33 16458165 0.955762528 13 30 236 0.9 1.255272505 0.275 0.181818182 0.325 33 3 1 36 3R:16458135-16458252 7 CG14883 FBtr0083291 16457662 16458233 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 16458150 16458209 3'utr CG14883 FlyBase G32839.1 ATGTATATGTCTATACCAAAAACCAGAATTAAAAACTACTTTTATTGTGATTATAAAAGA 9 16458202 0.917966287 5 9 67 1 1.079181246 0.25 0.222222222 0.416666667 9 0 0 12 3R:16458150-16458209 7 8 3826 FBgn0038432 123 8.256666667 12.72666667 0.06504065 0.968914009 0.628601362 30 -7 11.5 0.01 dme-miR-980-5p 7mer-m1 AAAAACT 3R 16458393 16458399 - 3R_16458393_16458399_- 0.765586663 0.765586663 0.765586663 0 CG42232 FBtr0290134 16458278 16458598 3R - 16458373 16458505 3'utr CG42232 FlyBase G51802.1 ATTTATGTATCAATTAATGAAGGCGTGTTATTTTTTAATTTCTCTTGTTAATCCAACCCATTTCGGTGGGATACCGTTGAATGGAATGGCTCCCCTCGCTCAGAACAAAAACTAACCTTAATAGATTTAAGGC 36 16458392 0.971108051 16 34 228 0.947368421 1.255272505 0.105263158 0.055555556 0.105263158 36 1 1 36 3R:16458373-16458505 7 CG42232 FBtr0290134 16458278 16458598 AAAAACT 7mer-m1 dme-miR-980-5p 3R - 16458363 16458428 3'utr CG42232 FlyBase G39127.1 TGAATGGAATGGCTCCCCTCGCTCAGAACAAAAACTAACCTTAATAGATTTAAGGCATTTAAAAAT 20 16458420 0.960929876 11 19 95 0.966666667 1.462397998 0.333333333 0.45 0.633333333 20 1 0 29 3R:16458363-16458428 7 16 3827 FBgn0250754 5895.886667 65.18333333 100.1066667 0.002713756 0.245461519 0.159829515 -7 21 7 0.01 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3R 16482871 16482876 - 3R_16482871_16482876_- 1 1 1 0 Der-2 FBtr0083307 16482692 16483028 3R - 16482854 16482908 3'utr Der-2 FlyBase G51856.1 TGAGAGAAAGGCGTGCAATAGTTAGCCAAAGTTGGTGCAGAGCGTGTGTGTATGT 33 16482876 0.942758367 5 32 176 0.925 0.966141733 0.15 0.181818182 0.325 33 0 3 37 3R:16482854-16482908 6 Der-2 FBtr0083307 16482692 16483028 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3R - 16482845 16482896 3'utr Der-2 FlyBase G39165.1 GTGCAATAGTTAGCCAAAGTTGGTGCAGAGCGTGTGTGTATGTCATTTATTG 24 16482876 0.735260277 7 23 129 0.947368421 1.556302501 0.184210526 0.5 0.684210526 24 2 0 36 3R:16482845-16482896 6 27 3828 FBgn0038438 365.7166667 32.3 49.50333333 0.073827644 0.835913313 0.545417817 0 0 0 0.01 dme-bantam-3p 8mer-A1 TGATCTCA 3R 16642258 16642265 + 3R_16642258_16642265_+ 0.631136385 0.631136385 0.631136385 0 nonA-l FBtr0333727|FBtr0083335 16642219|16642219 16643112|16642773 3R + 16642183 16642323 stop_codon nonA-l FlyBase G43468.1 ACGGACACATTGATTCATGGGGACACCGACGCTTCTAGACACTGAAACCTATATAGATAGCGACGAAAACAATAGTGATCTCATTAGTTACGCATAATATCGGACATTTCGCTCGGCTATGCGTGAACAATAACATAAATA 632 16642255 0.928516887 20 623 4300 0.987359551 2.545925329 0.130617978 0.109177215 0.209269663 632 8 1 703 3R:16642183-16642323 8 nonA-l FBtr0333727|FBtr0083335 16642219|16642219 16643112|16642773 TGATCTCA 8mer-A1 dme-bantam-3p 3R + 16642125 16642324 stop_codon nonA-l FlyBase G32850.1 AGCAACAATTCAACAATGGCTGGACCTGGAGGTCCAGATAATAGCGACGGAAACCAACACGGACACATTGATTCATGGGGACACCGACGCTTCTAGACACTGAAACCTATATAGATAGCGACGAAAACAATAGTGATCTCATTAGTTACGCATAATATCGGACATTTCGCTCGGCTATGCGTGAACAATAACATAAATAA 350 16642256 0.97857187 21 336 2267 0.960227273 1.75076545 0.164772727 0.388571429 0.59469697 350 13 8 507 3R:16642125-16642324 8 469.5 3829 FBgn0015520 285.6666667 13.51 20.79666667 1.643523921 34.75203553 22.57573329 3 2 2.5 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 3R 16642485 16642490 + 3R_16642485_16642490_+ 0.999133208 0.999999846 0.999566527 0.000612779 nonA-l FBtr0333727|FBtr0083335 16642219|16642219 16643112|16642773 3R + 16642455 16642489 3'utr nonA-l FlyBase G43469.1 AAAATCCAAACACGAATGGCAACTTACAAGATGTG 11 16642471 0.945568025 3 11 24 1 1.146128036 0.071428571 0.272727273 0.428571429 11 0 0 14 3R:16642455-16642489 5 nonA-l FBtr0333727|FBtr0083335 16642219|16642219 16643112|16642773 ATGTGC 6mer3-8 dme-miR-305-3p 3R + 16642450 16642503 3'utr nonA-l FlyBase G32851.1 ATGACAAAATCCAAACACGAATGGCAACTTACAAGATGTGCAGTATTTCGAAGA 13 16642471 0.971670941 4 11 58 0.823529412 0.84509804 0.235294118 0.230769231 0.411764706 13 2 1 14 3R:16642450-16642503 6 4 3830 FBgn0015520 285.6666667 13.51 20.79666667 0.014002334 0.29607698 0.192338516 14 14 14 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3R 16645060 16645066 + 3R_16645060_16645066_+ 0.521223855 0.521223855 0.521223855 0 CG10326 FBtr0083336|FBtr0333728 16644750|16644750 16645171|16645171 3R + 16644930 16645149 3'utr CG10326 FlyBase G43475.1 AACTAGCAAATCCGTGGTTCTGGCCCCATCACATCTCCTACTATAAGTTTGTAACATGTAAGACAGAAGTATTCTCGAAACGAGGCGTACGGAGAGAGAAAAAAACGCGCAACAAAAGACAAGGCATTTTTGTGATTATTTTGTGAGTTAATTGAAATTTATGATAATCCCAAGTAAGATAAAAAAAGGAACTTAAGCGTCTAATGAACTATATTTAAAT 229 16645059 0.989504324 28 216 2102 0.952702703 2.149219113 0.097972973 0.227074236 0.402027027 229 13 1 282 3R:16644930-16645149 7 CG10326 FBtr0333728|FBtr0083336 16644750|16644750 16645171|16645171 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 16644978 16645135 3'utr CG10326 FlyBase G32855.1 TTGTAACATGTAAGACAGAAGTATTCTCGAAACGAGGCGTACGGAGAGAGAAAAAAACGCGCAACAAAAGACAAGGCATTTTTGTGATTATTTTGTGAGTTAATTGAAATTTATGATAATCCCAAGTAAGATAAAAAAAGGAACTTAAGCGTCTAATG 134 16645059 0.989444456 17 124 1189 0.93442623 1.755874856 0.202185792 0.305970149 0.491803279 134 10 2 171 3R:16644978-16645135 7 146 3831 FBgn0038453 605.7533333 63.22 96.46 0.241022198 2.309395761 1.513580759 1 1 1 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 3R 16649933 16649939 + 3R_16649933_16649939_+ 0.620204266 0.620204266 0.620204266 0 Cctgamma FBtr0302370|FBtr0083338|FBtr0302371|FBtr0083337 16649738|16649738|16649738|16649738 16649978|16649978|16649978|16649978 3R + 16649921 16649957 3'utr Cctgamma FlyBase G43487.1 ACAAAATTCAAATGCATTTGCTCTCATTAACAGTACA 35 16649938 0.717592436 4 33 272 0.930232558 1.301029996 0 0.2 0.348837209 35 2 1 40 3R:16649921-16649957 7 Cctgamma FBtr0083337|FBtr0302371|FBtr0083338|FBtr0302370 16649738|16649738|16649738|16649738 16649978|16649978|16649978|16649978 TGCATTT 7mer-m8 dme-miR-277-3p 3R + 16649923 16649958 3'utr Cctgamma FlyBase G32867.1 AAAATTCAAATGCATTTGCTCTCATTAACAGTACAC 23 16649938 0.692324348 5 22 159 0.975609756 1.602059991 0.097560976 0.47826087 0.707317073 23 1 0 40 3R:16649923-16649958 7 27.5 3832 FBgn0015019 3709.713333 222.3133333 340.54 0.007412972 0.123699283 0.080754096 -5 -5 -5 0.01 dme-miR-277-3p 6mer3-8 TGCATT 3R 16989923 16989928 + 3R_16989923_16989928_+ 1 1 1 0 MESK4 FBtr0337059|FBtr0083367 16989884|16989884 16990419|16990321 3R + 16989893 16990007 3'utr MESK4 FlyBase G43490.1 TGCCGAAGGAGGGAGGGGTATTCCACTGATTGCATTCTGTCCCATTGTTGGACTATTTTTAACCGTCCGCTGGATTATCAGCGCTGCCCTCGCTGCCCTGCAGTCGTCGATTGCA 26 16989922 0.982296852 13 26 197 1 1.491361694 0.258064516 0.192307692 0.322580645 26 0 0 31 3R:16989893-16990007 6 MESK4 FBtr0083367|FBtr0337059 16989884|16989884 16990321|16990419 TGCATT 6mer3-8 dme-miR-277-3p 3R + 16989896 16990018 3'utr MESK4 FlyBase G32871.1 CGAAGGAGGGAGGGGTATTCCACTGATTGCATTCTGTCCCATTGTTGGACTATTTTTAACCGTCCGCTGGATTATCAGCGCTGCCCTCGCTGCCCTGCAGTCGTCGATTGCACCTACAGTGCT 34 16989926 0.982284608 17 33 254 0.961538462 1.698970004 0.480769231 0.382352941 0.596153846 34 2 0 50 3R:16989896-16990018 6 18.5 3833 FBgn0043069 8.44 0.73 1.12 2.191943128 25.34246575 16.51785714 1 -3 -1 0.01 dme-miR-277-3p 6mer3-8 TGCATT 3R 16994135 16994140 + 3R_16994135_16994140_+ 1 1 1 0 CG31274 FBtr0083369 16994096 16994532 3R + 16994101 16994219 3'utr CG31274 FlyBase G43495.1 AATATGCCGAAGGAGGGAGGGGTATTCCACTGATTGCATTCTGTCCCATTGTTGGACTATTTTTAACCGTCCGCTGGATTATCAGCGCTGCCCTCGCTGCCCTGCAGTCGTCGATTGCA 32 16994134 0.98470536 15 31 249 0.970588235 1.51851394 0.264705882 0.0625 0.117647059 32 1 0 33 3R:16994101-16994219 6 CG31274 FBtr0083369 16994096 16994532 TGCATT 6mer3-8 dme-miR-277-3p 3R + 16994101 16994159 3'utr CG31274 FlyBase G32875.1 AATATGCCGAAGGAGGGAGGGGTATTCCACTGATTGCATTCTGTCCCATTGTTGGACTA 18 16994134 0.984050713 7 17 131 1 1.397940009 0.2 0.388888889 0.56 18 0 0 25 3R:16994101-16994159 6 18 3834 FBgn0051274 0 0 0 Inf Inf Inf 1 1 1 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 16994323 16994328 + 3R_16994323_16994328_+ 1 1 1 0 CG31274 FBtr0083369 16994096 16994532 3R + 16994283 16994330 3'utr CG31274 FlyBase G43496.1 TTGTATGACGATGGACACGCACAAACCTAGTGAGAATTAATCTAGTGC 5 16994312 0.960709926 4 5 24 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:16994283-16994330 6 CG31274 FBtr0083369 16994096 16994532 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 16994285 16994330 3'utr CG31274 FlyBase G32876.1 GTATGACGATGGACACGCACAAACCTAGTGAGAATTAATCTAGTGC 9 16994294 0.828722779 5 8 29 1 1.079181246 0 0.333333333 0.5 9 0 0 12 3R:16994285-16994330 6 3 3835 FBgn0051274 0 0 0 Inf Inf Inf 11 29 20 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 16994630 16994635 - 3R_16994630_16994635_- 0.999999975 0.999620995 0.999810485 0.000267993 CG17556 FBtr0083375 16994540 16994810 3R - 16994550 16994681 3'utr CG17556 FlyBase G51890.1 AAAAACAATTTTATAGTCAGTGCATCCAAGCAACTGTTTTTGGTGGTCTAGTATTGTTGACGGCATTGAAACCGGATAATTTAAAACATTTATTATTGAGGTAGGCAAAAATAGTCCTGTAATAAATTTAGA 35 16994641 0.987332024 15 34 293 0.97826087 1.653212514 0.130434783 0.228571429 0.413043478 35 1 0 45 3R:16994550-16994681 6 CG17556 FBtr0083375 16994540 16994810 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R - 16994596 16994655 3'utr CG17556 FlyBase G39189.2 CAAGCAACTGTTTTTGGTGGTCTAGTATTGTTGACGGCATTGAAACCGGATAATTTAAAA 14 16994641 0.985346728 5 12 104 0.888888889 1.204119983 0 0.214285714 0.388888889 14 2 0 16 3R:16994596-16994655 6 17 3836 FBgn0038462 431.2066667 43.27333333 66.41 0.039424251 0.392851641 0.255985544 6 6 6 0.01 dme-miR-92b-3p 8mer-A1 GTGCAATA 3R 16994781 16994788 - 3R_16994781_16994788_- 0.628916032 0.628916032 0.628916032 0 CG17556 FBtr0337063|FBtr0083375 16994681|16994540 16994810|16994810 3R - 16994683 16994790 3'utr CG17556 FlyBase G51891.1 TTGTGCAATAGATGCCAGAATGTAATGGTTCCAAATATTCTCAGAAGTGGGTTTCCAGTTTCTGTTCTTTAAGCAGGTTACATAGATAAACAATTAAAGAAATAGGAG 18 16994764 0.971888107 10 18 120 1 1.278753601 0.052631579 0.055555556 0.105263158 18 0 0 19 3R:16994683-16994790 8 CG17556 FBtr0083375|FBtr0337063 16994540|16994681 16994810|16994810 GTGCAATA 8mer-A1 dme-miR-92b-3p 3R - 16994748 16994782 3'utr CG17556 FlyBase G39190.1 TAGATGCCAGAATGTAATGGTTCCAAATATTCTCA 6 16994764 0.615133227 3 6 38 1 1 0.1 0.5 0.7 6 0 0 10 3R:16994748-16994782 2 3.5 3837 FBgn0038462 431.2066667 43.27333333 66.41 0.008116758 0.08088122 0.052702906 -24 -24 -24 0.01 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 16999384 16999391 + 3R_16999384_16999391_+ 0.385560641 0.385560635 0.385560638 0 CG3534 FBtr0083370 16999271 16999449 3R + 16999295 16999421 3'utr CG3534 FlyBase G43509.1 CATTCCAGTTTATACTCCGTACATTCACAAACTGATTCCTTCTTAAACGTCTCCTGTAATTGACAGAACTTAAGTGCAATTAACAAATTCTGTGATTGACGATTTATTACAAATTTATGCGAAACCA 89 16999383 0.982934586 17 84 636 0.92920354 1.322219295 0.309734513 0.179775281 0.353982301 89 4 4 105 3R:16999295-16999421 8 CG3534 FBtr0083370 16999271 16999449 CTGTGATT 8mer-m1 dme-miR-308-3p 3R + 16999317 16999409 3'utr CG3534 FlyBase G32883.1 ATTCACAAACTGATTCCTTCTTAAACGTCTCCTGTAATTGACAGAACTTAAGTGCAATTAACAAATTCTGTGATTGACGATTTATTACAAATT 59 16999383 0.761703922 13 56 393 0.957746479 1.832508913 0.225352113 0.169491525 0.309859155 59 3 0 68 3R:16999317-16999409 8 54 3838 FBgn0038463 327.35 20.21 30.99 0.164961051 2.671944582 1.74249758 1 1 1 0.01 dme-miR-92b-3p 7mer-A1 TGCAATA 3R 17087931 17087937 + 3R_17087931_17087937_+ 0.782911824 0.782911824 0.782911824 0 GckIII FBtr0083399 17087725 17087988 3R + 17087902 17087951 3'utr GckIII FlyBase G43566.1 AGCATATAATATGTATTCGTTTGTTTATCTGCAATATTAATCTAATGTAA 16 17087929 0.990468693 3 16 189 1 1.230448921 0.058823529 0.0625 0.117647059 16 0 0 17 3R:17087902-17087951 7 GckIII FBtr0083399 17087725 17087988 TGCAATA 7mer-A1 dme-miR-92b-3p 3R + 17087920 17087948 3'utr GckIII FlyBase G32932.1 GTTTGTTTATCTGCAATATTAATCTAATG 5 17087929 0.759707324 2 5 50 1 0.84509804 0.428571429 0.4 0.571428571 5 0 0 7 3R:17087920-17087948 7 10 3839 FBgn0266465 620.1 30.44666667 46.71666667 0.016126431 0.328443179 0.214056368 2 2 2 0.01 dme-miR-184-5p 6mer3-8 TGATAA 3R 17091585 17091590 + 3R_17091585_17091590_+ 1 1 1 0 cal1 FBtr0083400 17091397 17091938 3R + 17091568 17091614 3'utr cal1 FlyBase G43578.1 AATTACATGATCGATAGTGATAATAGAAAACATAATACGTCATAATC 14 17091582 0.916644137 4 12 83 0.823529412 0.669006781 0.176470588 0.214285714 0.352941176 14 1 2 14 3R:17091568-17091614 6 cal1 FBtr0083400 17091397 17091938 TGATAA 6mer3-8 dme-miR-184-5p 3R + 17091573 17091603 3'utr cal1 FlyBase G32941.1 CATGATCGATAGTGATAATAGAAAACATAAT 12 17091582 0.914274075 3 11 60 0.888888889 0.726998728 0.166666667 0.416666667 0.611111111 12 0 2 16 3R:17091573-17091603 6 13 3840 FBgn0038478 575.3666667 19.37333333 29.76333333 0.022594288 0.671025465 0.436779035 3 3 3 0.01 dme-miR-307a-3p 6mer2-7 GTTGTG 3R 17091704 17091709 + 3R_17091704_17091709_+ 1 1 1 0 cal1 FBtr0083400 17091397 17091938 3R + 17091691 17091718 3'utr cal1 FlyBase G43579.1 CTTGTGTGTCGAAGTTGTGCTTTAGTTC 8 17091712 0.657554731 3 8 66 1 0.954242509 0.222222222 0.125 0.222222222 8 0 0 9 3R:17091691-17091718 6 cal1 FBtr0083400 17091397 17091938 GTTGTG 6mer2-7 dme-miR-307a-3p 3R + 17091677 17091718 3'utr cal1 FlyBase G32942.1 TTGCAATAGTAATTCTTGTGTGTCGAAGTTGTGCTTTAGTTC 11 17091713 0.98979939 3 10 98 0.8125 1.113943352 0.1875 0.363636364 0.5625 11 3 0 13 3R:17091677-17091718 6 9 3841 FBgn0038478 575.3666667 19.37333333 29.76333333 0.015642199 0.464556091 0.302385485 -8 -9 -8.5 0.01 dme-miR-1006-3p 6mer2-7 GAATTT 3R 17091738 17091743 - 3R_17091738_17091743_- 1 1 1 0 cher FBtr0332167|FBtr0337102|FBtr0089471|FBtr0290013|FBtr0337101|FBtr0337100|FBtr0089473|FBtr0290014|FBtr0290015|FBtr0303364 17091531|17091531|17091531|17091531|17091531|17091531|17091531|17091531|17091531|17091531 17092039|17092039|17092039|17092039|17092039|17092039|17092039|17092039|17092039|17092039 3R - 17091631 17091771 3'utr cher FlyBase G51937.1 AATACATAAAATTAACAATTGCCGATATGAATTTTGATAGACTTCATGGAAACGAACTAAAGCACAACTTCGACACACAAGAATTACTATTGCAATGCGAATAAATCTCTTAAACAATTATTTAATACTTAAGCGAAAAAT 47 17091734 0.985854668 16 44 306 0.965517241 1.271066772 0.275862069 0.170212766 0.327586207 47 0 2 56 3R:17091631-17091771 6 cher FBtr0089473|FBtr0290014|FBtr0290015|FBtr0303364|FBtr0337102|FBtr0332167|FBtr0290013|FBtr0089471|FBtr0337101|FBtr0337100 17091531|17091531|17091531|17091531|17091531|17091531|17091531|17091531|17091531|17091531 17092039|17092039|17092039|17092039|17092039|17092039|17092039|17092039|17092039|17092039 GAATTT 6mer2-7 dme-miR-1006-3p 3R - 17091710 17091767 3'utr cher FlyBase G39224.1 CATAAAATTAACAATTGCCGATATGAATTTTGATAGACTTCATGGAAACGAACTAAAG 14 17091734 0.979814397 3 14 99 1 1.414973348 0.076923077 0.5 0.730769231 14 0 0 26 3R:17091710-17091767 6 16 3842 FBgn0014141 11202.06 173.88 266.8866667 0.001428309 0.092017483 0.059950541 -9 -9 -9 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 17091795 17091800 - 3R_17091795_17091800_- 1 1 1 0 cher FBtr0332167|FBtr0337102|FBtr0089471|FBtr0290013|FBtr0337101|FBtr0337100|FBtr0089473|FBtr0290014|FBtr0290015|FBtr0303364 17091531|17091531|17091531|17091531|17091531|17091531|17091531|17091531|17091531|17091531 17092039|17092039|17092039|17092039|17092039|17092039|17092039|17092039|17092039|17092039 3R - 17091780 17091842 3'utr cher FlyBase G51937.2 AGAAGCTTCTGTTTTTCGACGCGCCATTTTCACTCTTTAAATTGATCTTACGTTTTATTTGTT 25 17091801 0.757886594 6 23 271 0.933333333 1.447158031 0.033333333 0.2 0.333333333 25 2 0 28 3R:17091780-17091842 6 cher FBtr0089473|FBtr0290014|FBtr0290015|FBtr0303364|FBtr0337102|FBtr0332167|FBtr0290013|FBtr0089471|FBtr0337101|FBtr0337100 17091531|17091531|17091531|17091531|17091531|17091531|17091531|17091531|17091531|17091531 17092039|17092039|17092039|17092039|17092039|17092039|17092039|17092039|17092039|17092039 TGATCT 6mer3-8 dme-bantam-3p 3R - 17091789 17091811 3'utr cher FlyBase G39225.1 ACTCTTTAAATTGATCTTACGTT 9 17091801 0.799675567 2 8 81 0.846153846 1.041392685 0 0.333333333 0.538461538 9 2 0 11 3R:17091789-17091811 6 14 3843 FBgn0014141 11202.06 173.88 266.8866667 0.00124977 0.080515298 0.052456723 1 1 1 0.01 dme-miR-7-5p 6mer2-7 TCTTCC 3R 17091840 17091845 + 3R_17091840_17091845_+ 1 1 1 0 cal1 FBtr0083400 17091397 17091938 3R + 17091822 17091882 3'utr cal1 FlyBase G43580.1 CGTCGAAAAACAGAAGCTTCTTCCTTCCATGTATGTACAAATAACAAAAACTTACCTAAAA 12 17091842 0.982488993 5 11 77 0.928571429 0.812913357 0.142857143 0.166666667 0.285714286 12 0 1 13 3R:17091822-17091882 6 cal1 FBtr0083400 17091397 17091938 TCTTCC 6mer2-7 dme-miR-7-5p 3R + 17091830 17091856 3'utr cal1 FlyBase G32943.1 AACAGAAGCTTCTTCCTTCCATGTATG 6 17091842 0.681129005 2 6 43 1 1 0.3 0.5 0.7 6 0 0 10 3R:17091830-17091856 6 8 3844 FBgn0038478 575.3666667 19.37333333 29.76333333 0.013904177 0.412938747 0.268787098 -2 -2 -2 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 17389770 17389775 + 3R_17389770_17389775_+ 1 0.999852315 0.999926157 0.00010444 lute FBtr0306209|FBtr0306210|FBtr0083435|FBtr0330037 17388979|17388979|17388979|17389153 17390265|17390265|17390265|17390265 3R + 17389759 17389789 3'utr lute FlyBase G43607.1 ATACACACATCTGATCTGATAATGATAAACT 6 17389769 0.854373975 3 5 37 0.857142857 0.77815125 0.142857143 0.166666667 0.285714286 6 1 0 6 3R:17389759-17389789 6 lute FBtr0306209|FBtr0306210|FBtr0083435|FBtr0330037 17388979|17388979|17388979|17389153 17390265|17390265|17390265|17390265 TGATCT 6mer3-8 dme-bantam-3p 3R + 17389723 17389801 3'utr lute FlyBase G32960.1 ATACCAAACATATTTTTGCCAGCATATACCTAACATATACACACATCTGATCTGATAATGATAAACTATAGTCCTAAAC 9 17389769 0.984205745 7 8 63 0.9 0.653212514 0.3 0.111111111 0.2 9 0 1 9 3R:17389723-17389801 6 6.5 3845 FBgn0262871 490.37 16.86 25.93333333 0.013255297 0.385527877 0.250642674 1 1 1 0.01 dme-miR-12-5p 6mer2-7 ATACTC 3R 17395270 17395275 - 3R_17395270_17395275_- 1 1 1 0 Sur-8 FBtr0083447|FBtr0339531|FBtr0083448 17395197|17395197|17395197 17397335|17397176|17397335 3R - 17395253 17395298 3'utr Sur-8 FlyBase G51982.1 AGATGATTAAGTCAAGCATAATGATACTCCTAAAAACAAAAATCAT 56 17395277 0.948712545 4 51 254 0.931506849 1.531478917 0.109589041 0.214285714 0.397260274 56 4 1 68 3R:17395253-17395298 6 Sur-8 FBtr0083448|FBtr0339531|FBtr0083447 17395197|17395197|17395197 17397335|17397176|17397335 ATACTC 6mer2-7 dme-miR-12-5p 3R - 17395258 17395292 3'utr Sur-8 FlyBase G39249.1 TTAAGTCAAGCATAATGATACTCCTAAAAACAAAA 42 17395277 0.734667913 4 38 194 0.929577465 1.819543936 0.098591549 0.476190476 0.690140845 42 5 0 66 3R:17395258-17395292 6 48.5 3846 FBgn0038504 2699.363333 76.09666667 116.9633333 0.0179672 0.637347234 0.414659865 2 2 2 0.01 dme-miR-986-5p 6mer2-7 TTCGAG 3R 17395375 17395380 - 3R_17395375_17395380_- 1 1 1 0 Sur-8 FBtr0083447|FBtr0339531|FBtr0083448 17395197|17395197|17395197 17397335|17397176|17397335 3R - 17395357 17395396 3'utr Sur-8 FlyBase G51983.1 CAGAGTTTGGCGAAATTTCGAGCCAATCGCAAATAGAAAC 11 17395381 0.954881325 2 10 56 0.928571429 1.113943352 0.357142857 0.272727273 0.428571429 11 1 0 13 3R:17395357-17395396 6 Sur-8 FBtr0083448|FBtr0339531|FBtr0083447 17395197|17395197|17395197 17397335|17397176|17397335 TTCGAG 6mer2-7 dme-miR-986-5p 3R - 17395367 17395390 3'utr Sur-8 FlyBase G39250.1 TTGGCGAAATTTCGAGCCAATCGC 5 17395381 0.735861256 2 5 25 1 0.903089987 0 0.4 0.625 5 0 0 8 3R:17395367-17395390 6 8 3847 FBgn0038504 2699.363333 76.09666667 116.9633333 0.002963662 0.105129441 0.068397503 1 1 1 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 17396109 17396114 - 3R_17396109_17396114_- 1 1 1 0 Sur-8 FBtr0083447|FBtr0339531|FBtr0083448 17395197|17395197|17395197 17397335|17397176|17397335 3R - 17396059 17396196 3'utr Sur-8 FlyBase G51986.1 GTAAATGAATATTGTATCATGCCACTTAACTGATAAGCACAAAAGATATCTAGAGATAACATGGACTCTGAGTTGCTGTTCTTCTAGTGAATTTGGATTAGACACTACTTATAAAAGGATGAAGAAAGTGTTCTGACG 107 17396135 0.982121625 15 107 790 1 2.113943352 0.076923077 0.168224299 0.315384615 107 0 0 130 3R:17396059-17396196 6 Sur-8 FBtr0083448|FBtr0339531|FBtr0083447 17395197|17395197|17395197 17397335|17397176|17397335 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R - 17396085 17396270 3'utr Sur-8 FlyBase G39252.1 AAGATGATTTAAATGCATTTAGTTATCATAACCATAATCAACGATATTTGTATGGCAAGTAAAAAGAGCTAGACGTAAATGAATATTGTATCATGCCACTTAACTGATAAGCACAAAAGATATCTAGAGATAACATGGACTCTGAGTTGCTGTTCTTCTAGTGAATTTGGATTAGACACTACTTAT 76 17396135 0.999988321 16 74 539 0.973451327 2.041392685 0.088495575 0.368421053 0.575221239 76 3 0 110 3R:17396085-17396270 6 26 3848 FBgn0038504 2699.363333 76.09666667 116.9633333 0.009631901 0.341670682 0.222291886 21 21 21 0.01 dme-miR-8-3p 7mer-A1 AGTATTA 3R 17396518 17396524 - 3R_17396518_17396524_- 0.823349562 0.823349562 0.823349562 0 Sur-8 FBtr0083447|FBtr0339531|FBtr0083448 17395197|17395197|17395197 17397335|17397176|17397335 3R - 17396490 17396566 3'utr Sur-8 FlyBase G51988.1 GTAGTCGTATTTTGTAAAAGCAAGCGCATAAAAGAAGCAACAAGTATTAAACTGCGTGTAATTTGTTTAAATAAGAA 9 17396538 0.999708046 5 9 42 1 1.041392685 0.090909091 0.222222222 0.363636364 9 0 0 11 3R:17396490-17396566 7 Sur-8 FBtr0083448|FBtr0339531|FBtr0083447 17395197|17395197|17395197 17397335|17397176|17397335 AGTATTA 7mer-A1 dme-miR-8-3p 3R - 17396509 17396549 3'utr Sur-8 FlyBase G39254.1 AAGCAAGCGCATAAAAGAAGCAACAAGTATTAAACTGCGTG 7 17396514 0.999381543 2 6 17 1 1 0 0.5 0.7 6 0 0 10 3R:17396509-17396549 7 3 3849 FBgn0038504 2699.363333 76.09666667 116.9633333 0.001111373 0.03942354 0.025649064 14 -10 2 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 3R 17396625 17396630 - 3R_17396625_17396630_- 1 1 1 0 Sur-8 FBtr0083447|FBtr0339531|FBtr0083448 17395197|17395197|17395197 17397335|17397176|17397335 3R - 17396627 17396659 3'utr Sur-8 FlyBase G51989.1 AAAAAAACGCAAGCGCCAAGGAATTGTTTGAAA 18 17396633 0.97268292 4 12 70 0.666666667 1.146128036 0.142857143 0.166666667 0.285714286 18 7 0 14 3R:17396627-17396659 3 Sur-8 FBtr0083448|FBtr0339531|FBtr0083447 17395197|17395197|17395197 17397335|17397176|17397335 GAAAAA 6mer3-8 dme-miR-980-5p 3R - 17396576 17396654 3'utr Sur-8 FlyBase G39255.1 AACGCAAGCGCCAAGGAATTGTTTGAAAAAATTTAAAACTAAAAACAAAAAGTGGTTAAGAAATTATTAATCTGTATAC 14 17396632 0.951801818 6 13 57 0.888888889 1.204119983 0.111111111 0.214285714 0.388888889 14 2 0 16 3R:17396576-17396654 6 13.5 3850 FBgn0038504 2699.363333 76.09666667 116.9633333 0.005001179 0.177405931 0.115420787 3 2 2.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3R 17396769 17396775 - 3R_17396769_17396775_- 0.823349562 0.823349562 0.823349562 0 Sur-8 FBtr0083447|FBtr0339531|FBtr0083448|FBtr0339532 17395197|17395197|17395197|17396664 17397335|17397176|17397335|17397335 3R - 17396714 17396818 3'utr Sur-8 FlyBase G51990.2 CAGAGTCCGCACTTTAGGTTTTAATTTAACTCATGCTTCCAAGCTAGTCAAAAATGTAACACGCGAAACGAATCGAAAGTAAATTGAAAGCTTTAAATCTTCTGT 35 17396783 0.977127394 8 31 215 0.891304348 1.311753861 0.282608696 0.228571429 0.413043478 35 4 1 41 3R:17396714-17396818 7 Sur-8 FBtr0339532|FBtr0083448|FBtr0339531|FBtr0083447 17396664|17395197|17395197|17395197 17397335|17397335|17397176|17397335 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R - 17396759 17396796 3'utr Sur-8 FlyBase G39256.1 AATTTAACTCATGCTTCCAAGCTAGTCAAAAATGTAAC 15 17396782 0.694486652 5 12 83 0.833333333 1.176091259 0.166666667 0.2 0.333333333 15 3 0 15 3R:17396759-17396796 7 17 3851 FBgn0038504 2699.363333 76.09666667 116.9633333 0.006297781 0.223400061 0.145344695 8 7 7.5 0.01 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 17396895 17396902 - 3R_17396895_17396902_- 0.625364009 0.625364009 0.625364009 0 Sur-8 FBtr0083447|FBtr0339531|FBtr0083448|FBtr0339532 17395197|17395197|17395197|17396664 17397335|17397176|17397335|17397335 3R - 17396824 17396999 3'utr Sur-8 FlyBase G51991.1 TGATATCAGCTACTTTCCCCAAAGCGATTCTAATTGCTTAACCTTCTACTTAGGCTTACTCCCTTAAACCGACTGGAGTGCGTTGGCTGACAAACGATAGCTTTAAAACGTTATACCAATGTCCCGCGTATTGTAAACTGCCCCGATTTGCTTTTTATTCTTTCTGTGTTCAATCA 82 17396902 0.939516592 26 80 537 0.988636364 1.638489257 0.284090909 0.048780488 0.113636364 82 0 1 87 3R:17396824-17396999 8 Sur-8 FBtr0339532|FBtr0083448|FBtr0339531|FBtr0083447 17396664|17395197|17395197|17395197 17397335|17397335|17397176|17397335 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R - 17396837 17396949 3'utr Sur-8 FlyBase G39257.1 TAGGCTTACTCCCTTAAACCGACTGGAGTGCGTTGGCTGACAAACGATAGCTTTAAAACGTTATACCAATGTCCCGCGTATTGTAAACTGCCCCGATTTGCTTTTTATTCTTT 68 17396902 0.926844242 18 63 395 0.947916667 1.260071388 0.427083333 0.352941176 0.541666667 68 1 4 91 3R:17396837-17396949 8 46.5 3852 FBgn0038504 2699.363333 76.09666667 116.9633333 0.017226284 0.611064874 0.397560489 0 0 0 0.01 dme-miR-184-3p 6mer2-7 CCGTCC 3R 17397142 17397147 - 3R_17397142_17397147_- 1 0.999999993 0.999999996 0 Sur-8 FBtr0083447|FBtr0339531|FBtr0083448|FBtr0339532 17395197|17395197|17395197|17396664 17397335|17397176|17397335|17397335 3R - 17397038 17397194 stop_codon Sur-8 FlyBase G51992.1 AGCAGCGACCGTCGCTAACGGTGCGATCTCAGCTAACGGGCAAGATCCCGTCCCCATCCTTTATACCATTCATTAAGGGAGAAAGCCATGATAGATAGGTGTTTTAGTTGAAATCGTTCTAAAGCGGTATAAGCTTGATAAAGATTCTAGTTTTTTT 75 17397149 0.973724553 17 70 371 0.926315789 1.245512668 0.084210526 0.213333333 0.378947368 75 3 4 88 3R:17397038-17397194 6 Sur-8 FBtr0339532|FBtr0083448|FBtr0339531|FBtr0083447 17396664|17395197|17395197|17395197 17397335|17397335|17397176|17397335 CCGTCC 6mer2-7 dme-miR-184-3p 3R - 17397094 17397199 stop_codon Sur-8 FlyBase G39259.1 CCAGAAGCAGCGACCGTCGCTAACGGTGCGATCTCAGCTAACGGGCAAGATCCCGTCCCCATCCTTTATACCATTCATTAAGGGAGAAAGCCATGATAGATAGGTG 46 17397149 0.940518818 13 38 156 0.847222222 1.484299839 0.166666667 0.456521739 0.652777778 46 10 1 61 3R:17397094-17397199 6 23 3853 FBgn0038504 2699.363333 76.09666667 116.9633333 0.008520528 0.302247142 0.196642823 2 2 2 0.01 "dme-miR-995-3p,dme-miR-998-3p" 6mer2-7 GGTGCT 3R 17397246 17397251 - 3R_17397246_17397251_- 1 1 1 0 Sur-8 FBtr0083447|FBtr0083448|FBtr0339532 17395197|17395197|17396664 17397335|17397335|17397335 3R - 17397203 17397277 3'utr Sur-8 FlyBase G51993.1 AGCTGCAGACGGTGAACCAGGCGCCCGGTGCTGGTGGCAACGGTGGTGGAGGAGCAGCGGCAGCAGGAGGATCCG 10 17397249 0.93622051 3 10 31 1 1.079181246 0.25 0.2 0.333333333 10 0 0 12 3R:17397203-17397277 6 Sur-8 FBtr0339532|FBtr0083448|FBtr0083447 17396664|17395197|17395197 17397335|17397335|17397335 GGTGCT 6mer2-7 "dme-miR-995-3p,dme-miR-998-3p" 3R - 17397226 17397258 3'utr Sur-8 FlyBase G39260.1 GGCGCCCGGTGCTGGTGGCAACGGTGGTGGAGG 9 17397249 0.93987847 2 8 28 0.909090909 0.698970004 0.454545455 0.222222222 0.363636364 9 0 1 10 3R:17397226-17397258 6 8.5 3854 FBgn0038504 2699.363333 76.09666667 116.9633333 0.003148891 0.111700031 0.072672347 -2 -2 -2 0.01 dme-miR-1007-3p 6mer3-8 TGAGCT 3R 17532337 17532342 - 3R_17532337_17532342_- 1 1 1 0 CG5823 FBtr0083505|FBtr0321266 17532323|17532323 17532719|17532719 3R - 17532321 17532357 3'utr CG5823 FlyBase G52005.1 AAGCCCGGCAACATATGAGCTCGTGTACAAATTAACC 11 17532342 0.948921814 4 10 49 0.933333333 1.146128036 0.2 0.272727273 0.466666667 11 1 0 14 3R:17532321-17532357 6 CG5823 FBtr0083505|FBtr0321266 17532323|17532323 17532719|17532719 TGAGCT 6mer3-8 dme-miR-1007-3p 3R - 17532320 17532403 3'utr CG5823 FlyBase G39270.1 AATGCAACGTGAATAATGCCAGAAATATGTTTGTAAATGAATAAAGAAGCCCGGCAACATATGAGCTCGTGTACAAATTAACCA 24 17532342 0.88281547 5 22 95 0.864864865 1.505149978 0.189189189 0.291666667 0.540540541 24 5 0 32 3R:17532320-17532403 6 12 3855 FBgn0038515 447.3266667 29.51666667 45.11666667 0.026826033 0.406549972 0.265977096 0 0 0 0.01 dme-bantam-3p 7mer-m8 TGATCTC 3R 17544044 17544050 + 3R_17544044_17544050_+ 0.661615243 0.661615243 0.661615243 0 SF1 FBtr0331707 17543545 17545148 3R + 17544016 17544084 3'utr SF1 FlyBase G43624.1 AGGGTATCGAAGTGCCCGAGGGCCATAATGATCTCCGCAGAATGCAGTTGCGAGAACTGGCTCAGCTGA 119 17544044 0.730581036 6 115 399 0.965986395 1.45331834 0.401360544 0.201680672 0.353741497 119 1 4 142 3R:17544016-17544084 7 SF1 FBtr0331707 17543545 17545148 TGATCTC 7mer-m8 dme-bantam-3p 3R + 17544016 17544063 3'utr SF1 FlyBase G32972.1 AGGGTATCGAAGTGCCCGAGGGCCATAATGATCTCCGCAGAATGCAGT 60 17544044 0.697515398 2 58 201 0.977272727 1.934498451 0.431818182 0.35 0.556818182 60 2 0 86 3R:17544016-17544063 7 84.5 3856 FBgn0025571 727 34.72 53.27 0.116231087 2.43375576 1.586258682 0 0 0 0.01 dme-miR-980-3p 6mer3-8 GGCAGC 3R 17544575 17544580 + 3R_17544575_17544580_+ 1 1 1 0 SF1 FBtr0331707 17543545 17545148 3R + 17544534 17544594 3'utr SF1 FlyBase G43627.1 ATGGAGCACGGTATGGGATTGGACCAGCACGGTCACGGTTTGGCAGCGATGGATCACGGCA 11 17544574 0.95117855 4 10 44 1 1.079181246 0.333333333 0.090909091 0.166666667 11 0 0 12 3R:17544534-17544594 6 SF1 FBtr0331707 17543545 17545148 GGCAGC 6mer3-8 dme-miR-980-3p 3R + 17544551 17544607 3'utr SF1 FlyBase G32974.1 ATTGGACCAGCACGGTCACGGTTTGGCAGCGATGGATCACGGCATGAGCCTTGGCAT 7 17544574 0.956565382 3 7 33 1 1.041392685 0.181818182 0.428571429 0.636363636 7 0 0 11 3R:17544551-17544607 6 6.5 3857 FBgn0025571 727 34.72 53.27 0.008940853 0.187211982 0.122019899 1 1 1 0.01 dme-miR-14-3p 6mer2-7 AGACTG 3R 17545001 17545006 + 3R_17545001_17545006_+ 1 0.999992282 0.999996141 5.44E-06 SF1 FBtr0083456|FBtr0331707 17544931|17543545 17545148|17545148 3R + 17544958 17545020 3'utr SF1 FlyBase G43629.1 CTGAGAACACTCAGCTGCTCCAACGATAGTGCTCGACCCTGTGAGACTGTCCCTGCAATCAAT 109 17544999 0.782007554 8 108 575 0.992366412 2.113943352 0.229007634 0.174311927 0.312977099 109 1 0 130 3R:17544958-17545020 6 SF1 FBtr0331707 17543545 17545148 AGACTG 6mer2-7 dme-miR-14-3p 3R + 17544926 17545018 3'utr SF1 FlyBase G32975.1 CGCTTGAGCTTTTGGACTTCATAAGATCGATCCTGAGAACACTCAGCTGCTCCAACGATAGTGCTCGACCCTGTGAGACTGTCCCTGCAATCA 92 17544999 0.804673074 12 85 528 0.948148148 1.630088715 0.333333333 0.380434783 0.577777778 92 5 2 128 3R:17544926-17545018 6 89.5 3858 FBgn0025571 727 34.72 53.27 0.123108666 2.577764977 1.680120143 2 2 2 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 3R 17673893 17673898 - 3R_17673893_17673898_- 1 1 1 0 alt FBtr0335026|FBtr0335027 17673730|17673730 17674823|17674823 3R - 17673853 17673928 3'utr alt FlyBase G52043.1 ATTGTCGGAACCTGTTGCATGCGACATACTGAAAAATTAGGAAAACCAACAAATTCAAGCCCATCAGCAACCACAA 9 17673909 0.920816002 6 9 29 1 1.041392685 0.090909091 0.111111111 0.272727273 9 0 0 11 3R:17673853-17673928 6 alt FBtr0335027|FBtr0335026 17673730|17673730 17674823|17674823 GAAAAA 6mer3-8 dme-miR-980-5p 3R - 17673872 17673924 3'utr alt FlyBase G39298.1 TCGGAACCTGTTGCATGCGACATACTGAAAAATTAGGAAAACCAACAAATTCA 6 17673892 0.950685687 4 5 26 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3R:17673872-17673924 6 4 3859 FBgn0038535 6868.54 219.92 337.8266667 0.000582365 0.018188432 0.011840392 11 -6 2.5 0.01 dme-miR-980-3p 6mer3-8 GGCAGC 3R 17674044 17674049 - 3R_17674044_17674049_- 1 1 1 0 alt FBtr0335026|FBtr0335027 17673730|17673730 17674823|17674823 3R - 17674023 17674068 3'utr alt FlyBase G52045.1 AATCCCAGGAAGAGCAAATGGCAGCAGCAACATTTAATTAAGCGTA 64 17674050 0.917603596 2 60 34 0.9625 1.58546073 0.1 0.203125 0.3625 64 2 1 77 3R:17674023-17674068 6 alt FBtr0335027|FBtr0335026 17673730|17673730 17674823|17674823 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 17674030 17674068 3'utr alt FlyBase G39299.1 AATCCCAGGAAGAGCAAATGGCAGCAGCAACATTTAATT 45 17674050 0.999590906 2 45 18 1 1.880813592 0.184210526 0.488888889 0.697368421 45 0 0 76 3R:17674030-17674068 6 53 3860 FBgn0038535 6868.54 219.92 337.8266667 0.007716341 0.240996726 0.156885188 1 1 1 0.01 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 17674291 17674298 - 3R_17674291_17674298_- 0.625364269 0.625364269 0.625364269 0 alt FBtr0089412|FBtr0089413|FBtr0335026|FBtr0089415|FBtr0089414|FBtr0089417|FBtr0335027|FBtr0089416 17674184|17674184|17673730|17674184|17674184|17674184|17673730|17674184 17674823|17674823|17674823|17674823|17674823|17674823|17674823|17674823 3R - 17674219 17674343 3'utr alt FlyBase G52047.1 ATTTAACACATACTTTGCATGCGATTATTATTTTTGTGTTACACTTGCATTTAAAAACGCGCTTTAAACAATTGTATATGTATCTTATGTTAAGCAAATGAATTTAAAACCCAGCTACTTAAAAT 39 17674299 0.983518202 13 39 299 1 1.681241237 0.520833333 0.179487179 0.333333333 39 0 0 48 3R:17674219-17674343 8 alt FBtr0335027|FBtr0089416|FBtr0089414|FBtr0089417|FBtr0335026|FBtr0089415|FBtr0089412|FBtr0089413 17673730|17674184|17674184|17674184|17673730|17674184|17674184|17674184 17674823|17674823|17674823|17674823|17674823|17674823|17674823|17674823 TGCATTTA 8mer-A1 dme-miR-277-3p 3R - 17674234 17674310 3'utr alt FlyBase G39301.1 TTGTGTTACACTTGCATTTAAAAACGCGCTTTAAACAATTGTATATGTATCTTATGTTAAGCAAATGAATTTAAAAC 25 17674299 0.985353548 8 24 184 0.971428571 1.531478917 0.571428571 0.32 0.514285714 25 1 0 34 3R:17674234-17674310 8 24 3861 FBgn0038535 6868.54 219.92 337.8266667 0.003494192 0.109130593 0.071042349 1 1 1 0.01 dme-miR-2b-2-5p 7mer-A1 TGAAGAA 3R 17674567 17674573 - 3R_17674567_17674573_- 0.823349562 0.823349562 0.823349562 0 alt FBtr0089412|FBtr0089413|FBtr0335026|FBtr0089415|FBtr0089414|FBtr0089417|FBtr0335027|FBtr0089416 17674184|17674184|17673730|17674184|17674184|17674184|17673730|17674184 17674823|17674823|17674823|17674823|17674823|17674823|17674823|17674823 3R - 17674553 17674601 3'utr alt FlyBase G52051.1 TAGTAGCGAGAACCAACAATTATGAGAATGAAGAACTATGGAACGCTTT 35 17674563 0.676865933 5 34 151 0.975609756 1.602059991 0.12195122 0.142857143 0.268292683 35 1 0 40 3R:17674553-17674601 7 alt FBtr0335027|FBtr0089416|FBtr0089414|FBtr0089417|FBtr0335026|FBtr0089415|FBtr0089412|FBtr0089413 17673730|17674184|17674184|17674184|17673730|17674184|17674184|17674184 17674823|17674823|17674823|17674823|17674823|17674823|17674823|17674823 TGAAGAA 7mer-A1 dme-miR-2b-2-5p 3R - 17674552 17674597 3'utr alt FlyBase G39302.1 AGCGAGAACCAACAATTATGAGAATGAAGAACTATGGAACGCTTTA 21 17674578 0.950765909 5 19 86 0.967741935 1.477121255 0.161290323 0.285714286 0.516129032 21 1 0 30 3R:17674552-17674597 7 27 3862 FBgn0038535 6868.54 219.92 337.8266667 0.003930966 0.122771917 0.079922643 -10 5 -2.5 0.01 dme-miR-283-5p 6mer3-8 TGATAT 3R 17688554 17688559 - 3R_17688554_17688559_- 1 1 1 0 osa FBtr0089582|FBtr0089581|FBtr0335025|FBtr0301487|FBtr0089583|FBtr0335024 17687816|17687816|17687816|17687816|17687816|17687816 17689817|17689817|17689817|17689817|17689817|17689817 3R - 17688508 17688615 3'utr osa FlyBase G52076.1 AATGAAAAACCCTCAGATGAAGGCAAGCAAACAATTTAAATTGAAATCAAATTAGGTGATATAATATATAAAAATACATAACATATACATACATAATTAATATAAACG 280 17688564 0.977399334 14 268 2131 0.956790123 2.491361694 0.216049383 0.128571429 0.24691358 280 14 0 310 3R:17688508-17688615 6 osa FBtr0089583|FBtr0335024|FBtr0335025|FBtr0301487|FBtr0089582|FBtr0089581 17687816|17687816|17687816|17687816|17687816|17687816 17689817|17689817|17689817|17689817|17689817|17689817 TGATAT 6mer3-8 dme-miR-283-5p 3R - 17688490 17688611 3'utr osa FlyBase G39321.1 AAAAACCCTCAGATGAAGGCAAGCAAACAATTTAAATTGAAATCAAATTAGGTGATATAATATATAAAAATACATAACATATACATACATAATTAATATAAACGAAACATGAAAAATCGAAA 175 17688564 0.983311896 14 170 1309 0.980916031 2.108903128 0.187022901 0.382857143 0.58778626 175 4 1 257 3R:17688490-17688611 6 216 3863 FBgn0261885 4320.86 50.56333333 77.47333333 0.049990048 4.271870262 2.788056105 5 5 5 0.01 dme-miR-980-3p 6mer3-8 GGCAGC 3R 17688759 17688764 - 3R_17688759_17688764_- 0.999999743 1 0.999999872 2.12E-07 osa FBtr0089582|FBtr0089581|FBtr0335025|FBtr0301487|FBtr0089583|FBtr0335024 17687816|17687816|17687816|17687816|17687816|17687816 17689817|17689817|17689817|17689817|17689817|17689817 3R - 17688672 17688787 3'utr osa FlyBase G52077.1 AATGTTACAAGGCACATGTAAGTGGCAGCACTGCATTTTGTATTATGTTTATGTGTATGATGTTGTATGATGTATTGATGGGCTGCGAAAATTCCAACTTCTTAGTTTTAATCGCA 64 17688750 0.98349036 17 60 473 0.9375 1.875061263 0.275 0.1875 0.35 64 5 0 75 3R:17688672-17688787 6 osa FBtr0089583|FBtr0335024|FBtr0335025|FBtr0301487|FBtr0089582|FBtr0089581 17687816|17687816|17687816|17687816|17687816|17687816 17689817|17689817|17689817|17689817|17689817|17689817 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 17688738 17688791 3'utr osa FlyBase G39322.2 ACGCAATGTTACAAGGCACATGTAAGTGGCAGCACTGCATTTTGTATTATGTTT 31 17688766 0.805381777 8 25 168 0.863636364 1.579783597 0.113636364 0.290322581 0.5 31 6 0 38 3R:17688738-17688791 6 28 3864 FBgn0261885 4320.86 50.56333333 77.47333333 0.006480191 0.55376096 0.36141468 -14 2 -6 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 3R 17688989 17688994 - 3R_17688989_17688994_- 1 1 1 0 osa FBtr0089582|FBtr0089581|FBtr0335025|FBtr0301487|FBtr0089583|FBtr0335024 17687816|17687816|17687816|17687816|17687816|17687816 17689817|17689817|17689817|17689817|17689817|17689817 3R - 17688952 17689044 3'utr osa FlyBase G52079.1 GAGGATAGTTTTTAAATTCTACCACTTACTAATACCTACATATTACCACAATGTGCAGCATAGGAACTCATAAACTGATCGAACTGAACGAAC 131 17688993 0.949704923 11 129 625 0.980769231 1.707570176 0.038461538 0.167938931 0.301282051 131 1 2 153 3R:17688952-17689044 6 osa FBtr0089583|FBtr0335024|FBtr0335025|FBtr0301487|FBtr0089582|FBtr0089581 17687816|17687816|17687816|17687816|17687816|17687816 17689817|17689817|17689817|17689817|17689817|17689817 ATGTGC 6mer3-8 dme-miR-305-3p 3R - 17688952 17689014 3'utr osa FlyBase G39324.1 AATACCTACATATTACCACAATGTGCAGCATAGGAACTCATAAACTGATCGAACTGAACGAAC 84 17688992 0.811985864 7 81 385 0.971631206 2.136720567 0 0.416666667 0.65248227 84 4 0 137 3R:17688952-17689014 6 92 3865 FBgn0261885 4320.86 50.56333333 77.47333333 0.021292058 1.819500297 1.187505378 -1 -2 -1.5 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 3R 17689282 17689287 - 3R_17689282_17689287_- 1 1 1 0 osa FBtr0089582|FBtr0089581|FBtr0335025|FBtr0301487|FBtr0089583|FBtr0335024 17687816|17687816|17687816|17687816|17687816|17687816 17689817|17689817|17689817|17689817|17689817|17689817 3R - 17689235 17689323 3'utr osa FlyBase G52081.1 GAGTCGAACGTGAAGATAGGAAACGGAGGATAACAAAGTTAAGAGCGAAATTCAAGCACACAGCATACTTATTGTACTAAATTTAATAA 34 17689273 0.798672459 9 32 102 0.952380952 1.602059991 0.166666667 0.205882353 0.357142857 34 2 0 40 3R:17689235-17689323 6 osa FBtr0089583|FBtr0335024|FBtr0335025|FBtr0301487|FBtr0089582|FBtr0089581 17687816|17687816|17687816|17687816|17687816|17687816 17689817|17689817|17689817|17689817|17689817|17689817 AGTTAA 6mer3-8 dme-miR-999-3p 3R - 17689241 17689288 3'utr osa FlyBase G39326.1 AAGTTAAGAGCGAAATTCAAGCACACAGCATACTTATTGTACTAAATT 9 17689273 0.846996572 2 7 21 0.8 0.903089987 0.1 0.111111111 0.2 9 2 0 8 3R:17689241-17689288 6 13.5 3866 FBgn0261885 4320.86 50.56333333 77.47333333 0.003124378 0.266991891 0.174253507 -14 -14 -14 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 3R 17689613 17689618 - 3R_17689613_17689618_- 1 1 1 0 osa FBtr0089582|FBtr0089581|FBtr0335025|FBtr0301487|FBtr0089583|FBtr0335024 17687816|17687816|17687816|17687816|17687816|17687816 17689817|17689817|17689817|17689817|17689817|17689817 3R - 17689516 17689764 3'utr osa FlyBase G52082.3 AGTCGACTAAGCTGGCGTTCGGTGGTTGAACAGCGGGCCCAGGAGCAACTCCGAAGTGCAAGACCAGAAGATGATACCTGCATCCATGTGGGGTGGGCATGTAAATTTACTTAAGTATGGCGCCAAGAGAGAGAGAGAGAGTCACGATGTGCGAGAACTCGTGTCCGAACTCTAAGGATACGTAAACGGGAACTCAGCAGGTGCAGCGCCTGCAATGTATCTGCGATGGAATGGCTCGCCAATCCATCA 185 17689617 0.900458749 25 182 785 0.981220657 2.320146286 0.356807512 0.118918919 0.234741784 185 4 0 209 3R:17689516-17689764 6 osa FBtr0089583|FBtr0335024|FBtr0335025|FBtr0301487|FBtr0089582|FBtr0089581 17687816|17687816|17687816|17687816|17687816|17687816 17689817|17689817|17689817|17689817|17689817|17689817 ATGTGC 6mer3-8 dme-miR-305-3p 3R - 17689516 17689755 3'utr osa FlyBase G39328.1 AGCTGGCGTTCGGTGGTTGAACAGCGGGCCCAGGAGCAACTCCGAAGTGCAAGACCAGAAGATGATACCTGCATCCATGTGGGGTGGGCATGTAAATTTACTTAAGTATGGCGCCAAGAGAGAGAGAGAGAGTCACGATGTGCGAGAACTCGTGTCCGAACTCTAAGGATACGTAAACGGGAACTCAGCAGGTGCAGCGCCTGCAATGTATCTGCGATGGAATGGCTCGCCAATCCATCA 105 17689617 0.901254192 23 95 433 0.886227545 1.216019206 0.449101796 0.457142857 0.658682635 105 11 8 148 3R:17689516-17689755 6 72 3867 FBgn0261885 4320.86 50.56333333 77.47333333 0.016663349 1.423956754 0.929352035 -1 -1 -1 0.01 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 17803390 17803397 - 3R_17803390_17803397_- 0.385560641 0.385560641 0.385560641 0 CG17802 FBtr0083526 17803223 17803529 3R - 17803344 17803417 3'utr CG17802 FlyBase G52142.1 AAATATCATAAGATATCTGACTGTGATTTGGGTGTATCGATCAGTTTTGAAAGTGGATCTTTCATCCTCTTAAA 84 17803390 0.986174666 7 82 696 0.980392157 1.698970004 0.401960784 0.214285714 0.352941176 84 1 1 100 3R:17803344-17803417 8 CG17802 FBtr0083526 17803223 17803529 CTGTGATT 8mer-m1 dme-miR-308-3p 3R - 17803375 17803417 3'utr CG17802 FlyBase G39369.1 AAATATCATAAGATATCTGACTGTGATTTGGGTGTATCGATCA 73 17803390 0.700876462 5 70 602 0.955752212 2.033423755 0.442477876 0.397260274 0.610619469 73 5 0 108 3R:17803375-17803417 8 78 3868 FBgn0038549 243.33 17.45666667 26.79 0.320552336 4.468206989 2.911534155 -7 -7 -7 0.01 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3R 17809569 17809574 - 3R_17809569_17809574_- 1 1 1 0 CG18012 FBtr0332430 17809399 17810834 3R - 17809485 17809648 stop_codon CG18012 FlyBase G52153.1 TTCCAGGAGCTGCGATGGCGGGAGAGTTGGCGCCTGATCGCGGCCCCCGTACTGGAGGCATTTCTATAGAGCATTTTGACAAAGATTTGACAATTACACGTTATGAGAGACTTCCTTTGATTGCTAATCGCTTTTTCTAGGCTAGTTACTACAAATTCTGTACA 66 17809574 0.984063547 24 62 489 0.93902439 1.58546073 0.134146341 0.181818182 0.341463415 66 4 1 77 3R:17809485-17809648 6 CG18012 FBtr0332430 17809399 17810834 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3R - 17809461 17809621 stop_codon CG18012 FlyBase G39378.1 TGGCGCCTGATCGCGGCCCCCGTACTGGAGGCATTTCTATAGAGCATTTTGACAAAGATTTGACAATTACACGTTATGAGAGACTTCCTTTGATTGCTAATCGCTTTTTCTAGGCTAGTTACTACAAATTCTGTACACAAAAGAGCTTCAAACTTGCTTAT 59 17809574 0.964719723 25 56 422 0.965116279 1.919078092 0.127906977 0.372881356 0.569767442 59 3 0 83 3R:17809461-17809621 6 33 3869 FBgn0038552 964.0066667 73.48333333 112.6866667 0.034232128 0.449081424 0.292847424 0 0 0 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 17809699 17809705 - 3R_17809699_17809705_- 0.823349562 0.823349562 0.823349562 0 CG18012 FBtr0332430 17809399 17810834 3R - 17809681 17809745 3'utr CG18012 FlyBase G52154.1 TCAGCTGGCCGAGCAGCTGAGGATTTGGTTCGAAAATTTTCCAAAGAATCCCAGCATCCTGGAGA 19 17809707 0.8401087 7 19 94 1 1.322219295 0.238095238 0.105263158 0.19047619 19 0 0 21 3R:17809681-17809745 7 CG18012 FBtr0332430 17809399 17810834 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 17809681 17809721 3'utr CG18012 FlyBase G39379.1 TTGGTTCGAAAATTTTCCAAAGAATCCCAGCATCCTGGAGA 11 17809708 0.678133153 3 9 60 0.75 1.079181246 0.125 0.363636364 0.5625 11 4 0 12 3R:17809681-17809721 7 13 3870 FBgn0038552 964.0066667 73.48333333 112.6866667 0.013485384 0.176910864 0.115364137 2 3 2.5 0.01 dme-miR-318-3p 6mer2-7 CCAGTG 3R 17809931 17809936 - 3R_17809931_17809936_- 0.999999999 1 0.999999999 0 CG18012 FBtr0332430 17809399 17810834 3R - 17809857 17809937 5'utr CG18012 FlyBase G52155.1 ACCAGTGGGCTCGACCTGCCCATGAAGGTGGTCGACATGTTCGGCAGCGGGCTGCCTGTCTGCGCCTACGATTTCAAGTGG 8 17809921 0.921001147 6 8 31 1 0.954242509 0.111111111 0.125 0.222222222 8 0 0 9 3R:17809857-17809937 6 CG18012 FBtr0332430 17809399 17810834 CCAGTG 6mer2-7 dme-miR-318-3p 3R - 17809917 17809993 5'utr CG18012 FlyBase G39380.1 AGGACTACCCCACTGTTCTGGCCAGCGCCGACCTGGGCGTGTGTCTGCACTGGAGCACCAGTGGGCTCGACCTGCCC 5 17809937 0.898707165 5 5 24 1 1 0.2 0.8 0.9 5 0 0 10 3R:17809917-17809993 6 2.5 3871 FBgn0038552 964.0066667 73.48333333 112.6866667 0.002593343 0.03402132 0.022185411 -15 1 -7 0.01 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 3R 17810339 17810346 - 3R_17810339_17810346_- 0.674386078 0.674938394 0.674662236 0.000390535 CG18012 FBtr0332430 17809399 17810834 3R - 17810220 17810409 5'utr CG18012 FlyBase G52158.1 AGTTCTGTATGATCGTGCGCCCGCGCAATTCCATCCCATCGACTTGACTCACAAGCACGAGCTGTACCTGAAGCTGGCCAAAGACTACCCACAGTTCCAGGCCAAGGACGCCGAACAATCCGATGTTCTGGAGGCCACCGCTCTTACCCAAAAGCTGGCCAGCGGTGTTGTGCAGTACAGACCACAGCGA 742 17810347 0.934530663 17 734 2772 0.989784336 2.639486489 0.114642452 0.150943396 0.284903519 742 8 1 872 3R:17810220-17810409 8 CG18012 FBtr0332430 17809399 17810834 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R - 17810268 17810405 5'utr CG18012 FlyBase G39381.1 CTGTATGATCGTGCGCCCGCGCAATTCCATCCCATCGACTTGACTCACAAGCACGAGCTGTACCTGAAGCTGGCCAAAGACTACCCACAGTTCCAGGCCAAGGACGCCGAACAATCCGATGTTCTGGAGGCCACCGCT 377 17810347 0.92399419 14 366 1278 0.976311337 2.460145817 0.116751269 0.395225464 0.614213198 377 13 1 577 3R:17810268-17810405 8 416 3872 FBgn0038552 964.0066667 73.48333333 112.6866667 0.431532285 5.661147653 3.691652369 1 1 1 0.01 dme-miR-184-3p 6mer2-7 CCGTCC 3R 17810744 17810749 - 3R_17810744_17810749_- 1 1 1 0 CG18012 FBtr0332430 17809399 17810834 3R - 17810708 17810799 5'utr CG18012 FlyBase G52161.1 AAGGCCTTTTGGCAGACGCTCAGTCTGCTGATGGCTCTCATCTCCATTGGCCGTCCCAGCTTCCTACTCGTCCAGAATCCGCCCGGCATTCC 63 17810752 0.97856051 10 60 427 0.961038961 1.86923172 0.025974026 0.174603175 0.324675325 63 3 0 74 3R:17810708-17810799 6 CG18012 FBtr0332430 17809399 17810834 CCGTCC 6mer2-7 dme-miR-184-3p 3R - 17810711 17810860 intron-5'utr CG18012 FlyBase G39382.1 AATCCACGAGCTAACTGCCGTCCCAGTGACGAACCTAACACCCAAACTGCGCCTGCTCTTCAAGGCCTTTTGGCAGACGCTCAGTCTGCTGATGGCTCTCATCTCCATTGGCCGTCCCAGCTTCCTACTCGTCCAGAATCCGCCCGGCAT 57 17810753 0.975184987 13 55 344 0.961038961 1.568201724 0.090909091 0.263157895 0.454545455 57 2 1 74 3R:17810711-17810860 6 43 3873 FBgn0038552 964.0066667 73.48333333 112.6866667 0.044605501 0.585166704 0.381589067 3 4 3.5 0.01 dme-miR-263a-5p 7mer-A1 TGCCATA 3R 18023150 18023156 + 3R_18023150_18023156_+ 0.782911824 0.782911824 0.782911824 0 CG7785 FBtr0083539 18022826 18023689 3R + 18023135 18023210 3'utr CG7785 FlyBase G43675.1 TTTTAGTTATTCCTTTGCCATATTTCTTCTCTAGTCAAAAAGAAAAGTTCCCAAGCTGAATTCTATCTCACAACCA 15 18023159 0.988209255 8 13 134 0.866666667 1.113943352 0.333333333 0 0 15 2 0 13 3R:18023135-18023210 7 CG7785 FBtr0083539 18022826 18023689 TGCCATA 7mer-A1 dme-miR-263a-5p 3R + 18023122 18023175 3'utr CG7785 FlyBase G33013.1 ATTTTAGTTTTAGTTTTAGTTATTCCTTTGCCATATTTCTTCTCTAGTCAAAAA 7 18023158 0.992553353 5 5 70 0.727272727 0.903089987 0 0.428571429 0.636363636 7 3 0 8 3R:18023122-18023175 7 8 3874 FBgn0038564 104 7.253333333 11.1 0.076923077 1.102941176 0.720720721 -9 -8 -8.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3R 18023353 18023359 + 3R_18023353_18023359_+ 0.661615511 0.661615511 0.661615511 0 CG7785 FBtr0083539 18022826 18023689 3R + 18023291 18023399 3'utr CG7785 FlyBase G43676.1 TAGTCGTAAAATGCACTGTTCTGTTCTCATTTAGACATCAGGTGTATAAACTTTGTAAACTCTCTAGTCCTTGCACTATCCAAACCGAAAGTATTTGTATAATTTTATT 71 18023361 0.828377223 10 67 581 0.914893617 0.980255942 0.234042553 0.253521127 0.436170213 71 0 8 86 3R:18023291-18023399 7 CG7785 FBtr0083539 18022826 18023689 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 18023302 18023390 3'utr CG7785 FlyBase G33014.1 TGCACTGTTCTGTTCTCATTTAGACATCAGGTGTATAAACTTTGTAAACTCTCTAGTCCTTGCACTATCCAAACCGAAAGTATTTGTAT 36 18023361 0.984854319 9 34 273 0.9375 1.051152522 0.291666667 0.25 0.4375 36 0 3 45 3R:18023302-18023390 7 45.5 3875 FBgn0038564 104 7.253333333 11.1 0.4375 6.272977941 4.099099099 -8 -8 -8 0.01 dme-miR-970-3p 7mer-A1 CTTATGA 3R 18045243 18045249 - 3R_18045243_18045249_- 0.823349562 0.823349562 0.823349562 0 htl FBtr0083548|FBtr0083550|FBtr0083549 18045214|18045214|18045214 18045730|18045730|18045730 3R - 18045208 18045252 3'utr htl FlyBase G52165.1 TGCCTTATGAAACAAATAAATGTTGTACACGAATCCCAACGAAAA 7 18045232 0.965109432 2 7 41 1 0.954242509 0.222222222 0.285714286 0.444444444 7 0 0 9 3R:18045208-18045252 7 htl FBtr0083549|FBtr0083548|FBtr0083550 18045214|18045214|18045214 18045730|18045730|18045730 CTTATGA 7mer-A1 dme-miR-970-3p 3R - 18045207 18045252 3'utr htl FlyBase G39384.1 TGCCTTATGAAACAAATAAATGTTGTACACGAATCCCAACGAAAAA 13 18045220 0.964670836 4 13 51 1 1.176091259 0.2 0.153846154 0.266666667 13 0 0 15 3R:18045207-18045252 7 3.5 3876 FBgn0010389 31.66666667 1.04 1.59 0.110526316 3.365384615 2.201257862 -17 -29 -23 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 18045342 18045347 - 3R_18045342_18045347_- 1 0.999764154 0.999882077 0.000166736 htl FBtr0083548|FBtr0083550|FBtr0083549 18045214|18045214|18045214 18045730|18045730|18045730 3R - 18045254 18045413 3'utr htl FlyBase G52166.1 GTATATGCGTAGTTCTAAGTTGAACTTAAGACTCGGTTGTATTTGCTGTTGTATTTCATATTGTACTGATCTTTGTAGTATTCGCAGTTTTATACTCGCTAAATTATACTCGTAGCCCATAAACATAAATGTTCTATCTTAGCGTTAGTTGCATGCCGCA 233 18045340 0.823965657 31 226 2282 0.971326165 2.432969291 0.254480287 0.158798283 0.297491039 233 8 0 271 3R:18045254-18045413 6 htl FBtr0083549|FBtr0083548|FBtr0083550 18045214|18045214|18045214 18045730|18045730|18045730 TGATCT 6mer3-8 dme-bantam-3p 3R - 18045291 18045408 3'utr htl FlyBase G39386.1 TGCGTAGTTCTAAGTTGAACTTAAGACTCGGTTGTATTTGCTGTTGTATTTCATATTGTACTGATCTTTGTAGTATTCGCAGTTTTATACTCGCTAAATTATACTCGTAGCCCATAAA 182 18045340 0.822774116 27 168 1819 0.925795053 1.8162413 0.233215548 0.368131868 0.593639576 182 18 3 262 3R:18045291-18045408 6 101.5 3877 FBgn0010389 31.66666667 1.04 1.59 3.205263158 97.59615385 63.83647799 -7 -7 -7 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3R 18045381 18045386 - 3R_18045381_18045386_- 1 1 1 0 htl FBtr0083548|FBtr0083550|FBtr0083549 18045214|18045214|18045214 18045730|18045730|18045730 3R - 18045254 18045413 3'utr htl FlyBase G52166.1 GTATATGCGTAGTTCTAAGTTGAACTTAAGACTCGGTTGTATTTGCTGTTGTATTTCATATTGTACTGATCTTTGTAGTATTCGCAGTTTTATACTCGCTAAATTATACTCGTAGCCCATAAACATAAATGTTCTATCTTAGCGTTAGTTGCATGCCGCA 233 18045388 0.823965657 31 226 2282 0.971326165 2.432969291 0.254480287 0.158798283 0.297491039 233 8 0 271 3R:18045254-18045413 6 htl FBtr0083549|FBtr0083548|FBtr0083550 18045214|18045214|18045214 18045730|18045730|18045730 AAGACT 6mer3-8 dme-miR-14-3p 3R - 18045291 18045408 3'utr htl FlyBase G39386.1 TGCGTAGTTCTAAGTTGAACTTAAGACTCGGTTGTATTTGCTGTTGTATTTCATATTGTACTGATCTTTGTAGTATTCGCAGTTTTATACTCGCTAAATTATACTCGTAGCCCATAAA 182 18045388 0.822774116 27 168 1819 0.925795053 1.8162413 0.233215548 0.368131868 0.593639576 182 18 3 262 3R:18045291-18045408 6 84.5 3878 FBgn0010389 31.66666667 1.04 1.59 2.668421053 81.25 53.14465409 2 2 2 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 18045508 18045513 - 3R_18045508_18045513_- 0.999999979 0.999999995 0.999999987 0 htl FBtr0083548|FBtr0083550|FBtr0083549 18045214|18045214|18045214 18045730|18045730|18045730 3R - 18045468 18045541 3'utr htl FlyBase G52167.1 TAAGTCTGTAAATCTCTTGAAACATTTTACCAAAATTGCACCAAAGGCGTAAAACCAAAAACAAGCAGCTACTC 55 18045505 0.970572657 9 49 279 0.861538462 1.271066772 0.153846154 0.145454545 0.276923077 55 7 2 56 3R:18045468-18045541 6 htl FBtr0083549|FBtr0083548|FBtr0083550 18045214|18045214|18045214 18045730|18045730|18045730 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 18045458 18045531 3'utr htl FlyBase G39387.1 AATCTCTTGAAACATTTTACCAAAATTGCACCAAAGGCGTAAAACCAAAAACAAGCAGCTACTCGAATTTACTT 35 18045506 0.941956707 8 31 177 0.903846154 1.371067862 0.115384615 0.4 0.596153846 35 4 1 47 3R:18045458-18045531 6 35 3879 FBgn0010389 31.66666667 1.04 1.59 1.105263158 33.65384615 22.01257862 -8 -7 -7.5 0.01 dme-miR-999-3p 6mer2-7 GTTAAC 3R 18045660 18045665 - 3R_18045660_18045665_- 1 1 1 0 htl FBtr0083548|FBtr0083550|FBtr0083549 18045214|18045214|18045214 18045730|18045730|18045730 3R - 18045646 18045754 stop_codon htl FlyBase G52168.1 CTGCAGAAGTGGTGTAATTATTAAACGAATCAGGATCCTTAGATGAGATCAGGACAATTCAAGCCTGGTTTTTGAACCAAAGTCAAATTGTTAACTAGAGATTATGAAG 19 18045666 0.967657918 10 18 98 0.954545455 1.322219295 0.045454545 0.157894737 0.272727273 19 1 0 21 3R:18045646-18045754 6 htl FBtr0083549|FBtr0083548|FBtr0083550 18045214|18045214|18045214 18045730|18045730|18045730 GTTAAC 6mer2-7 dme-miR-999-3p 3R - 18045644 18045674 3'utr htl FlyBase G39388.1 AGTCAAATTGTTAACTAGAGATTATGAAGTG 5 18045664 0.960952756 4 5 29 1 0.903089987 0.25 0.4 0.625 5 0 0 8 3R:18045644-18045674 6 5.5 3880 FBgn0010389 31.66666667 1.04 1.59 0.173684211 5.288461538 3.459119497 1 -1 0 0.01 dme-miR-184-5p 6mer3-8 TGATAA 3R 18179762 18179767 - 3R_18179762_18179767_- 1 1 1 0 cdm FBtr0083619|FBtr0336472 18179711|18179273 18179916|18179916 3R - 18179753 18179820 3'utr cdm FlyBase G52191.1 GTCAGCTCTGTAAATTGTCTCCAATTTTAACTTAAGTTCAAAAGTTCTCGACTTGATAAACTTTTATT 12 18179768 0.985539527 8 11 87 0.933333333 0.84509804 0.2 0.166666667 0.333333333 12 0 1 14 3R:18179753-18179820 6 cdm FBtr0083619|FBtr0336472 18179711|18179273 18179916|18179916 TGATAA 6mer3-8 dme-miR-184-5p 3R - 18179756 18179786 3'utr cdm FlyBase G39406.1 AGTTCAAAAGTTCTCGACTTGATAAACTTTT 6 18179768 0.733099961 3 5 41 1 0.954242509 0.111111111 0.5 0.666666667 6 0 0 9 3R:18179756-18179786 6 7 3881 FBgn0261532 596.8733333 20.49333333 31.33 0.011727781 0.341574496 0.223428024 1 1 1 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 18179860 18179865 - 3R_18179860_18179865_- 1 1 1 0 cdm FBtr0083619|FBtr0336472 18179711|18179273 18179916|18179916 3R - 18179851 18179899 3'utr cdm FlyBase G52192.1 AGTGGCCAAATGACATCTTTATCCATCCGGATTTTGATCTAGTTTCTAT 11 18179880 0.767583024 8 10 101 0.928571429 1.113943352 0.071428571 0.181818182 0.357142857 11 1 0 13 3R:18179851-18179899 6 cdm FBtr0083619|FBtr0336472 18179711|18179273 18179916|18179916 TGATCT 6mer3-8 dme-bantam-3p 3R - 18179837 18179927 stop_codon cdm FlyBase G39407.1 AGTTCCAGTGAAATGAGTGTATGCAATAAGTGGCCAAATGACATCTTTATCCATCCGGATTTTGATCTAGTTTCTATAATTGTATTTAGTT 11 18179865 0.993141179 7 9 108 0.846153846 1.041392685 0.076923077 0.090909091 0.230769231 11 2 0 11 3R:18179837-18179927 6 5.5 3882 FBgn0261532 596.8733333 20.49333333 31.33 0.009214685 0.268379961 0.17555059 15 0 7.5 0.01 dme-miR-8-3p 6mer2-7 AGTATT 3R 18192595 18192600 - 3R_18192595_18192600_- 1 1 1 0 Ssdp FBtr0330051|FBtr0083612 18192492|18192492 18194983|18195175 3R - 18192573 18192653 3'utr Ssdp FlyBase G52208.1 AATGAAGGGAATACAAAACAAAAAACCGATTGAATATGGAATATGTTTAAATAAGTATTTTAGTGTTAATTATACAATTTA 22 18192594 0.987054277 7 22 191 1 1.397940009 0.28 0.136363636 0.24 22 0 0 25 3R:18192573-18192653 6 Ssdp FBtr0330051|FBtr0083612 18192492|18192492 18194983|18195175 AGTATT 6mer2-7 dme-miR-8-3p 3R - 18192580 18192609 3'utr Ssdp FlyBase G39418.1 GTTTAAATAAGTATTTTAGTGTTAATTATA 7 18192594 0.632720012 4 7 72 1 0.954242509 0.222222222 0.285714286 0.444444444 7 0 0 9 3R:18192580-18192609 6 10.5 3883 FBgn0011481 1276.61 30.31666667 46.89333333 0.008224908 0.346344145 0.223912425 -6 -6 -6 0.01 dme-miR-980-5p 6mer2-7 AAAAAC 3R 18192787 18192792 - 3R_18192787_18192792_- 1 1 1 0 Ssdp FBtr0330051|FBtr0083612 18192492|18192492 18194983|18195175 3R - 18192780 18192818 3'utr Ssdp FlyBase G52209.1 TTGAGCGTTTCAATTGCTGGATCTATAAAAACCACAAAC 16 18192804 0.969128584 5 15 114 1 1.230448921 0.470588235 0.066666667 0.176470588 15 0 0 17 3R:18192780-18192818 6 Ssdp FBtr0330051|FBtr0083612 18192492|18192492 18194983|18195175 AAAAAC 6mer2-7 dme-miR-980-5p 3R - 18192783 18192925 3'utr Ssdp FlyBase G39420.1 AAATTTATAGTATGTGCTGCATGAATTATATCTAAATTATAGTATGGAATGCAAGCGAAAAAACTTAAATAGTGACTAAGTTAAATTTATTTACTAACGCTTTGGGTTTGAGCGTTTCAATTGCTGGATCTATAAAAACCACA 23 18192804 0.978761285 14 23 167 1 1.477121255 0.2 0.217391304 0.4 23 0 0 30 3R:18192783-18192925 6 7.5 3884 FBgn0011481 1276.61 30.31666667 46.89333333 0.005874934 0.247388675 0.159937447 12 12 12 0.01 dme-miR-276a-3p 7mer-m8 AGTTCCT 3R 18193769 18193775 - 3R_18193769_18193775_- 0.631524679 0.631524679 0.631524679 0 Ssdp FBtr0330051|FBtr0083612 18192492|18192492 18194983|18195175 3R - 18193722 18193803 3'utr Ssdp FlyBase G52215.1 AAACAACTAAAATGAAAATCGTTATTTAAGTTCCTTCCAAACGGCGAGCAATAATACCATTTGTATGGCATGAGCATGAGAT 38 18193773 0.983620513 7 37 286 0.977272727 1.33243846 0.227272727 0.131578947 0.25 38 0 1 43 3R:18193722-18193803 7 Ssdp FBtr0330051|FBtr0083612 18192492|18192492 18194983|18195175 AGTTCCT 7mer-m8 dme-miR-276a-3p 3R - 18193754 18193799 3'utr Ssdp FlyBase G39422.1 AACTAAAATGAAAATCGTTATTTAAGTTCCTTCCAAACGGCGAGCA 21 18193773 0.978717758 2 21 142 1 1.505149978 0.25 0.380952381 0.59375 21 0 0 32 3R:18193754-18193799 7 28 3885 FBgn0011481 1276.61 30.31666667 46.89333333 0.021933088 0.923584387 0.597099801 -2 -2 -2 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 3R 18193970 18193976 - 3R_18193970_18193976_- 0.782911824 0.782911824 0.782911824 0 Ssdp FBtr0330051|FBtr0083612 18192492|18192492 18194983|18195175 3R - 18193900 18193980 3'utr Ssdp FlyBase G52216.1 AATTGTACAAATTGTGAACGCGTCCGTTTGTTTCCTTACGCTTACGCTATTCAGTCTGCCGTCTGTTTGTTTGGTTTGTTT 26 18193969 0.852219816 6 26 250 1 1.462397998 0.275862069 0.115384615 0.206896552 26 0 0 29 3R:18193900-18193980 7 Ssdp FBtr0330051|FBtr0083612 18192492|18192492 18194983|18195175 GTACAAA 7mer-A1 dme-miR-305-5p 3R - 18193912 18193980 3'utr Ssdp FlyBase G39423.1 AATTGTACAAATTGTGAACGCGTCCGTTTGTTTCCTTACGCTTACGCTATTCAGTCTGCCGTCTGTTTG 11 18193969 0.983052632 7 11 99 1 1.146128036 0.142857143 0.272727273 0.428571429 11 0 0 14 3R:18193912-18193980 7 7 3886 FBgn0011481 1276.61 30.31666667 46.89333333 0.005483272 0.230896097 0.14927495 -7 -7 -7 0.01 dme-miR-980-3p 6mer3-8 GGCAGC 3R 18195120 18195125 - 3R_18195120_18195125_- 1 1 1 0 Ssdp FBtr0083612 18192492 18195175 3R - 18195073 18195203 stop_codon Ssdp FlyBase G52220.2 AGATCATCCGGACTACTTTATGCCATAACAACATCACCAGCAACAGCAGCAGCAGCATCAGCAGCATCTCAACACGGTGGCAGCCGCTGTGGCAGCTGTGGTGGCGGCTGCGGCGTCCAACGGATCGGCGG 91 18195126 0.960292627 10 82 381 0.910891089 1.486666573 0.089108911 0.076923077 0.168316832 91 7 2 92 3R:18195073-18195203 6 Ssdp FBtr0083612|FBtr0083611|FBtr0083613 18192492|18194858|18194858 18195175|18195175|18195175 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 18195085 18195145 3'utr Ssdp FlyBase G39431.1 CAGCAGCATCTCAACACGGTGGCAGCCGCTGTGGCAGCTGTGGTGGCGGCTGCGGCGTCCA 61 18195126 0.962652844 6 55 228 0.870967742 1.908485019 0.021505376 0.344262295 0.569892473 61 12 0 81 3R:18195085-18195145 6 66 3887 FBgn0011481 1276.61 30.31666667 46.89333333 0.051699423 2.177020341 1.407449531 1 1 1 0.01 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 3R 18239827 18239834 - 3R_18239827_18239834_- 0.674982063 0.674982063 0.674982063 0 CG7156 FBtr0083606|FBtr0083607 18239418|18239418 18239891|18241598 3R - 18239771 18239871 3'utr CG7156 FlyBase G52239.2 GCTATTGAGTCCGTAAAGTATTTTCTTATTTCGTACTGTACCTGAAATCCCATTTGTGATTCCTTGCTCAGTTCTGATTGGCATTGATTTTGATTACTTTC 393 18239835 0.807096895 22 389 2966 0.992125984 2.702430536 0.035433071 0.226463104 0.401574803 393 4 0 504 3R:18239771-18239871 8 CG7156 FBtr0083606|FBtr0083607 18239418|18239418 18239891|18241598 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R - 18239706 18239877 3'utr CG7156 FlyBase G39446.1 TGCTTTGCTATTGAGTCCGTAAAGTATTTTCTTATTTCGTACTGTACCTGAAATCCCATTTGTGATTCCTTGCTCAGTTCTGATTGGCATTGATTTTGATTACTTTCAAAGAATCTGAAGTCGCTCCATAGCGATTAATTATGTTGTGAATCTGCTATATTATTTTCTATGC 265 18239835 0.983908563 21 260 2036 0.983827493 1.86332286 0.064690027 0.309433962 0.506738544 265 2 4 365 3R:18239706-18239877 8 302.5 3888 FBgn0038588 127.6666667 6.006666667 9.273333333 2.369451697 50.36071032 32.62041697 1 1 1 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 3R 18240719 18240724 - 3R_18240719_18240724_- 1 1 1 0 CG7156 FBtr0083607 18239418 18241598 3R - 18240686 18240746 5'utr CG7156 FlyBase G52242.1 GGAGGGCGGCATGTTGTACGATTACCTGCAGAGCTACACGCCCACGAGTAGTAAGAGTGTC 16 18240725 0.979900851 2 14 96 0.909090909 1 0.272727273 0.375 0.545454545 16 1 1 20 3R:18240686-18240746 6 CG7156 FBtr0083607 18239418 18241598 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 3R - 18240663 18240743 5'utr CG7156 FlyBase G39447.1 GGGCGGCATGTTGTACGATTACCTGCAGAGCTACACGCCCACGAGTAGTAAGAGTGTCAATTATGGAGAGCTTTTTCCCTC 9 18240725 0.978685947 5 8 54 0.933333333 0.84509804 0.533333333 0.333333333 0.6 9 0 1 14 3R:18240663-18240743 6 11 3889 FBgn0038588 127.6666667 6.006666667 9.273333333 0.08616188 1.831298557 1.186196981 1 1 1 0.01 dme-miR-184-3p 7mer-A1 CCGTCCA 3R 18241233 18241239 - 3R_18241233_18241239_- 0.823349562 0.823349562 0.823349562 0 CG7156 FBtr0083607 18239418 18241598 3R - 18241207 18241278 5'utr CG7156 FlyBase G52244.1 GCGACTACATATATGAGGCGGCTCTAGAGTTCAGTCATGCCGTCCAAGCGGAGGTTAACCTGGAGTATGCCG 79 18241241 0.848274654 5 76 419 0.95505618 1.929418926 0.359550562 0.126582278 0.224719101 79 4 0 85 3R:18241207-18241278 7 CG7156 FBtr0083607 18239418 18241598 CCGTCCA 7mer-A1 dme-miR-184-3p 3R - 18241197 18241265 5'utr CG7156 FlyBase G39449.1 TGAGGCGGCTCTAGAGTTCAGTCATGCCGTCCAAGCGGAGGTTAACCTGGAGTATGCCGAAGCCCACGA 35 18241241 0.966857282 4 32 168 0.918367347 1.176091259 0.224489796 0.285714286 0.489795918 35 2 2 45 3R:18241197-18241265 7 54 3890 FBgn0038588 127.6666667 6.006666667 9.273333333 0.422976501 8.990011099 5.823148814 2 2 2 0.01 dme-miR-33-5p 6mer3-8 CAATGC 3R 18248433 18248438 + 3R_18248433_18248438_+ 1 1 1 0 14-3-3epsilon FBtr0083565|FBtr0083567|FBtr0083568|FBtr0083566 18248287|18248287|18248287|18248287 18248579|18248579|18250550|18250279 3R + 18248390 18248441 3'utr 14-3-3epsilon FlyBase G43729.1 CAACAACAACACGACAACAACTTCAAGAACAACAACATGGAACCAATGCGGC 11 18248427 0.797135019 3 8 8 0.928571429 1.113943352 0.142857143 0.272727273 0.428571429 11 1 0 13 3R:18248390-18248441 6 14-3-3epsilon FBtr0083566|FBtr0083568|FBtr0083567|FBtr0083565 18248287|18248287|18248287|18248287 18250279|18250550|18248579|18248579 CAATGC 6mer3-8 dme-miR-33-5p 3R + 18248415 18248445 3'utr 14-3-3epsilon FlyBase G33047.1 AGAACAACAACATGGAACCAATGCGGCAACA 6 18248427 0.597286818 2 5 5 0.875 0.84509804 0 0.333333333 0.5 6 1 0 7 3R:18248415-18248445 6 6 3891 FBgn0020238 26098.09667 2256.556667 3469.193333 0.000229902 0.002658918 0.001729509 6 6 6 0.01 dme-miR-1006-3p 6mer2-7 GAATTT 3R 18248773 18248778 + 3R_18248773_18248778_+ 1 1 1 0 14-3-3epsilon FBtr0083568|FBtr0083566 18248287|18248287 18250550|18250279 3R + 18248702 18248773 3'utr 14-3-3epsilon FlyBase G43732.2 ATTAAGTTGGCGTCGCTTCGCAATTTGGCTCCTTAACGTTAGAAAACTGCAACATCAAGTCTACTACATTTG 18 18248762 0.745611948 12 16 115 0.95 1.278753601 0.2 0.111111111 0.2 18 1 0 19 3R:18248702-18248773 1 14-3-3epsilon FBtr0083566|FBtr0083568 18248287|18248287 18250279|18250550 GAATTT 6mer2-7 dme-miR-1006-3p 3R + 18248741 18248815 3'utr 14-3-3epsilon FlyBase G33050.1 TAGAAAACTGCAACATCAAGTCTACTACATTTGAATTTTTTGCATTCGAGAAACCAAGCATTTTATTATATTTGA 7 18248758 0.991670987 6 6 55 0.875 0.84509804 0.125 0.142857143 0.25 7 1 0 7 3R:18248741-18248815 6 2.5 3892 FBgn0020238 26098.09667 2256.556667 3469.193333 9.58E-05 0.001107883 0.000720629 11 15 13 0.01 dme-miR-980-3p 6mer3-8 GGCAGC 3R 18256341 18256346 + 3R_18256341_18256346_+ 0.989664277 1 0.994832139 0.007308444 moi FBtr0299938 18256210 18257677 3R + 18256314 18256368 3'utr moi FlyBase G43740.1 TTCAAAACGTTACCTGGAAAGAATTCTGGCAGCGTGAGGGGCATGAGCTGCTCGA 8 18256340 0.941656517 4 8 33 1 0.903089987 0.5 0 0 8 0 0 8 3R:18256314-18256368 6 moi FBtr0299938 18256210 18257677 GGCAGC 6mer3-8 dme-miR-980-3p 3R + 18256319 18256367 3'utr moi FlyBase G33055.1 AACGTTACCTGGAAAGAATTCTGGCAGCGTGAGGGGCATGAGCTGCTCG 6 18256340 0.930580219 2 6 26 1 0.84509804 0.857142857 0.166666667 0.285714286 6 0 0 7 3R:18256319-18256367 6 6 3893 FBgn0261019 238.14 13.89333333 21.31333333 0.025195263 0.431861804 0.281513919 1 1 1 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 3R 18256670 18256675 + 3R_18256670_18256675_+ 0.999735873 0.999627012 0.999681442 7.70E-05 moi FBtr0299938 18256210 18257677 3R + 18256651 18256702 3'utr moi FlyBase G43742.1 AGAGGAGGACGAATCATACTTGACTGCCAACGACGATCCCGAGGATTGTGAC 21 18256670 0.954755784 5 20 93 0.956521739 1.041392685 0.086956522 0.095238095 0.173913043 21 0 1 22 3R:18256651-18256702 6 moi FBtr0299938 18256210 18257677 TTGACT 6mer3-8 dme-miR-1012-3p 3R + 18256650 18256688 3'utr moi FlyBase G33056.1 AAGAGGAGGACGAATCATACTTGACTGCCAACGACGATC 9 18256670 0.939734668 3 9 36 1 1.301029996 0.3 0.555555556 0.8 9 0 0 20 3R:18256650-18256688 6 15 3894 FBgn0261019 238.14 13.89333333 21.31333333 0.062988158 1.079654511 0.703784798 0 0 0 0.01 dme-miR-2b-2-5p 7mer-A1 TGAAGAA 3R 18288895 18288901 - 3R_18288895_18288901_- 0.823349562 0.823349562 0.823349562 0 l(3)05822 FBtr0334313|FBtr0334314|FBtr0083596|FBtr0083595 18288864|18288864|18288864|18288864 18289578|18289578|18289578|18289578 3R - 18288861 18288926 3'utr l(3)05822 FlyBase G52261.1 AAAAAATATCAGGATATCCTAGCAGTGAAGAATGTAAACCGAAATAAATGAAGATGATCACAAAAA 8 18288912 0.96459698 4 6 21 0.888888889 0.602059991 0 0.125 0.222222222 8 0 1 8 3R:18288861-18288926 7 l(3)05822 FBtr0083595|FBtr0083596|FBtr0334314|FBtr0334313 18288864|18288864|18288864|18288864 18289578|18289578|18289578|18289578 TGAAGAA 7mer-A1 dme-miR-2b-2-5p 3R - 18288869 18288916 3'utr l(3)05822 FlyBase G39464.1 AGGATATCCTAGCAGTGAAGAATGTAAACCGAAATAAATGAAGATGAT 5 18288894 0.934874335 5 5 15 1 1.041392685 0 0.8 0.909090909 5 0 0 11 3R:18288869-18288916 7 3.5 3895 FBgn0010877 1339.8 56.08333333 85.52666667 0.00261233 0.062407132 0.040922909 11 -7 2 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 3R 18289156 18289161 - 3R_18289156_18289161_- 1 1 1 0 l(3)05822 FBtr0334313|FBtr0334314|FBtr0083596|FBtr0083595 18288864|18288864|18288864|18288864 18289578|18289578|18289578|18289578 3R - 18288954 18289196 3'utr l(3)05822 FlyBase G52262.1 CAACACAATAGAGCAGGCAAAAAATATTGTATATAAGTTAAAATGTACGTGATTTCTATTAATGTTTAATTATTTAAATTGAGTTTAGTTAGACGCTTAGTTAGGCACATTTACAGATTCCAATTTACGATGCAAGCCGTTTGTTTATGTATGTATTAATAATTCTTTCAAATGCTTAGGGCAATTCATCTCCGAGTGAGAAGATGAATGGTTATTTATTTGTCCCTTGCAGAGTGCTACTCT 191 18289143 0.949828572 37 177 1645 0.954954955 1.326335861 0.126126126 0.181818182 0.310810811 187 1 9 212 3R:18288954-18289196 6 l(3)05822 FBtr0083595|FBtr0083596|FBtr0334314|FBtr0334313 18288864|18288864|18288864|18288864 18289578|18289578|18289578|18289578 AGTTAA 6mer3-8 dme-miR-999-3p 3R - 18289123 18289192 3'utr l(3)05822 FlyBase G39466.1 ACAATAGAGCAGGCAAAAAATATTGTATATAAGTTAAAATGTACGTGATTTCTATTAATGTTTAATTATT 135 18289143 0.835374981 12 128 1256 0.958115183 1.41735305 0.089005236 0.358208955 0.54973822 134 2 6 183 3R:18289123-18289192 6 116 3896 FBgn0010877 1339.8 56.08333333 85.52666667 0.086580087 2.068350669 1.356302128 -18 -18 -18 0.01 dme-miR-184-5p 6mer2-7 GATAAG 3R 18289517 18289522 - 3R_18289517_18289522_- 1 1 1 0 l(3)05822 FBtr0334313|FBtr0334314|FBtr0083596|FBtr0083595 18288864|18288864|18288864|18288864 18289578|18289578|18289578|18289578 3R - 18289480 18289570 3'utr l(3)05822 FlyBase G52265.1 AGCCCCCGATCTTTAACGATCTATAAATTGTATACCCGAAACATTGTCGATAAGCGAGTAGATGTCGAGCGAACTGAATCATATACACACA 1154 18289527 0.842697144 15 1133 5383 0.98249453 2.226277609 0.087527352 0.160311958 0.29321663 1154 17 7 1347 3R:18289480-18289570 6 l(3)05822 FBtr0083595|FBtr0083596|FBtr0334314|FBtr0334313 18288864|18288864|18288864|18288864 18289578|18289578|18289578|18289578 GATAAG 6mer2-7 dme-miR-184-5p 3R - 18289474 18289554 3'utr l(3)05822 FlyBase G39469.1 CGATCTATAAATTGTATACCCGAAACATTGTCGATAAGCGAGTAGATGTCGAGCGAACTGAATCATATACACACACACATA 763 18289527 0.837049553 13 748 3398 0.980392157 2.740362689 0.087344029 0.346002621 0.555258467 763 21 1 1100 3R:18289474-18289554 6 893.5 3897 FBgn0010877 1339.8 56.08333333 85.52666667 0.666890581 15.93164933 10.44703406 5 5 5 0.01 dme-miR-318-3p 6mer2-7 CCAGTG 3R 18299975 18299980 + 3R_18299975_18299980_+ 1 1 1 0 Dlc90F FBtr0083575 18299756 18300044 3R + 18299915 18300018 3'utr Dlc90F FlyBase G43763.1 ATGGAGCACTTGAAAACCTTGTCGTCACTTCCAAGCAATTAGCAAGCAACTATTCCGTTGCCAGTGTACTCGCCTAATGTTATTCTTGATTTTCAATCTAAAAA 50 18299967 0.82288201 13 47 377 0.927272727 1.40654018 0.254545455 0.08 0.163636364 50 3 1 51 3R:18299915-18300018 6 Dlc90F FBtr0083575 18299756 18300044 CCAGTG 6mer2-7 dme-miR-318-3p 3R + 18299917 18300019 3'utr Dlc90F FlyBase G33074.1 GGAGCACTTGAAAACCTTGTCGTCACTTCCAAGCAATTAGCAAGCAACTATTCCGTTGCCAGTGTACTCGCCTAATGTTATTCTTGATTTTCAATCTAAAAAC 36 18299945 0.986379043 13 34 298 0.963636364 1.423245874 0.181818182 0.333333333 0.563636364 36 1 1 53 3R:18299917-18300019 6 17.5 3898 FBgn0024432 2285.386667 360.07 555.2633333 0.007657348 0.048601661 0.031516578 8 30 19 0.01 dme-miR-8-3p 7mer-m8 CAGTATT 3R 18390505 18390511 - 3R_18390505_18390511_- 0.661615243 0.661615243 0.661615243 0 Vha100-2 FBtr0083656|FBtr0083657 18390321|18390321 18390624|18390624 3R - 18390446 18390527 3'utr Vha100-2 FlyBase G52289.1 ATTTTTTGGATATTGTCAGTATTGTGGTGCTCTTCCCACATTTTTGTATCCTCCGTTGTGTATTCCATTTGTAGTCAAAGTA 112 18390512 0.794389871 17 103 1249 0.912698413 2.06069784 0.30952381 0.098214286 0.198412698 112 11 0 115 3R:18390446-18390527 7 Vha100-2 FBtr0083657|FBtr0083656 18390321|18390321 18390624|18390624 CAGTATT 7mer-m8 dme-miR-8-3p 3R - 18390479 18390580 3'utr Vha100-2 FlyBase G39481.2 TACCCCCAGCCCGAACTATTTTGATTGTTTGTTAAATGTTTTTGTTTTGTTTAATTTTTTGGATATTGTCAGTATTGTGGTGCTCTTCCCACATTTTTGTAT 78 18390512 0.993026676 14 70 878 0.890909091 1.514104821 0.309090909 0.333333333 0.527272727 78 10 2 98 3R:18390479-18390580 7 88 3899 FBgn0028670 809.4533333 32.13666667 48.88333333 0.108715347 2.738305155 1.800204569 1 1 1 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 3R 18390609 18390614 - 3R_18390609_18390614_- 1 1 1 0 Vha100-2 FBtr0083656|FBtr0083657 18390321|18390321 18390624|18390624 3R - 18390552 18390666 stop_codon Vha100-2 FlyBase G52290.1 TTCAGCTTCAAGGCCATTCTCGATGGCGAAGAGGAGGAGTAAACCCATCCAAATGTGCTCAAACTAGGGAAACGTGTATACAATTATACCCCCAGCCCGAACTATTTTGATTGTT 159 18390613 0.948550113 6 156 680 0.983050847 1.939519253 0.276836158 0.088050314 0.18079096 159 2 1 174 3R:18390552-18390666 6 Vha100-2 FBtr0083657|FBtr0083656 18390321|18390321 18390624|18390624 ATGTGC 6mer3-8 dme-miR-305-3p 3R - 18390586 18390642 stop_codon Vha100-2 FlyBase G39482.1 GGCGAAGAGGAGGAGTAAACCCATCCAAATGTGCTCAAACTAGGGAAACGTGTATAC 77 18390613 0.926793328 3 76 319 1 2.053078443 0.274336283 0.38961039 0.584070796 77 0 0 113 3R:18390586-18390642 6 113 3900 FBgn0028670 809.4533333 32.13666667 48.88333333 0.139600389 3.516232756 2.311626321 -1 -1 -1 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3R 18400472 18400477 - 3R_18400472_18400477_- 1 1 1 0 CG12333 FBtr0083655 18400371 18400826 3R - 18400421 18400569 3'utr CG12333 FlyBase G52310.1 TATCATTGTTATAGCATACGTATGTATATGCGTTGGGACTGGGCTAAACTCTTCGGAGTGCAGAGCTTCCGATGTCCAGACCCGATTTTATCTGTGTTTTACTACCATAATACATATTATAGACGTCTAAGGCATTAACGCTTTAGCCA 30 18400479 0.990918103 12 28 303 0.885714286 1.491361694 0.228571429 0.166666667 0.285714286 30 4 0 31 3R:18400421-18400569 6 CG12333 FBtr0083655 18400371 18400826 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 18400463 18400544 3'utr CG12333 FlyBase G39497.1 ATATGCGTTGGGACTGGGCTAAACTCTTCGGAGTGCAGAGCTTCCGATGTCCAGACCCGATTTTATCTGTGTTTTACTACCA 17 18400480 0.99169923 8 15 173 0.923076923 1.079181246 0.384615385 0.411764706 0.615384615 17 1 1 24 3R:18400463-18400544 6 16 3901 FBgn0038617 154.6666667 8.656666667 13.23 0.103448276 1.848286484 1.209372638 2 3 2.5 0.01 dme-miR-14-3p 6mer2-7 AGACTG 3R 18404456 18404461 + 3R_18404456_18404461_+ 0.999667911 0.674495229 0.83708157 0.229931821 koko FBtr0334146|FBtr0334148|FBtr0334149|FBtr0334147 18404444|18404444|18404444|18404444 18404726|18404726|18404726|18404726 3R + 18404416 18404491 stop_codon koko FlyBase G43770.1 AAGAACGAGGGCTTCCTGAATGCCACCTAATCGCTGAGAGAGACTGCCAAAACCATTCCTTCTGCCATCTGAACTT 7 18404471 0.963368552 5 7 38 1 1 0.2 0.285714286 0.5 7 0 0 10 3R:18404416-18404491 6 koko FBtr0334146|FBtr0334148|FBtr0334149|FBtr0334147 18404444|18404444|18404444|18404444 18404726|18404726|18404726|18404726 AGACTG 6mer2-7 dme-miR-14-3p 3R + 18404444 18404491 stop_codon koko FlyBase G33079.1 AATCGCTGAGAGAGACTGCCAAAACCATTCCTTCTGCCATCTGAACTT 6 18404471 0.723209429 4 6 31 1 0.954242509 0 0.5 0.666666667 6 0 0 9 3R:18404444-18404491 6 3.5 3902 FBgn0264816 41 4.086666667 6.296666667 0.085365854 0.856443719 0.555849656 -15 -15 -15 0.01 dme-miR-1003-3p 7mer-A1 TGTGAGA 3R 18406767 18406773 - 3R_18406767_18406773_- 0.823349562 0.823349562 0.823349562 0 CG31122 FBtr0083653|FBtr0301432|FBtr0333831 18406629|18406629|18406062 18407464|18407881|18407881 3R - 18406751 18406794 3'utr CG31122 FlyBase G52315.1 CTGGGGGCAAAGTATCAAATTTGTGAGACGAGAGCGTCGATAGC 19 18406774 0.87305092 4 18 112 0.961538462 1.096910013 0.346153846 0.263157895 0.461538462 19 0 1 25 3R:18406751-18406794 7 CG31122 FBtr0333831|FBtr0301432|FBtr0083653 18406062|18406629|18406629 18407881|18407881|18407464 TGTGAGA 7mer-A1 dme-miR-1003-3p 3R - 18406748 18406789 3'utr CG31122 FlyBase G39502.1 GGCAAAGTATCAAATTTGTGAGACGAGAGCGTCGATAGCAAT 12 18406774 0.690453005 2 11 64 1 1.255272505 0.444444444 0.416666667 0.611111111 12 0 0 18 3R:18406748-18406789 7 15 3903 FBgn0051122 626.0666667 23.62 36.17666667 0.02395911 0.635055038 0.414631899 1 1 1 0.01 dme-miR-8-3p 7mer-A1 AGTATTA 3R 18406894 18406900 - 3R_18406894_18406900_- 0.823349562 0.823349562 0.823349562 0 CG31122 FBtr0083653|FBtr0301432|FBtr0333831 18406629|18406629|18406062 18407464|18407881|18407881 3R - 18406844 18406925 3'utr CG31122 FlyBase G52316.1 ACACACCCACAAAGCCCTCTGATTAAGTATTACTTAGCGTACGTAAGCTAACTTTAAGTTGCAACTGGCAAAAAGCAAGCCA 49 18406903 0.989206283 7 43 409 0.873015873 1.263241435 0.079365079 0.244897959 0.412698413 49 6 2 55 3R:18406844-18406925 7 CG31122 FBtr0333831|FBtr0301432|FBtr0083653 18406062|18406629|18406629 18407881|18407881|18407464 AGTATTA 7mer-A1 dme-miR-8-3p 3R - 18406865 18406988 3'utr CG31122 FlyBase G39503.1 CCAATGAATTTATACATCATCCGCACAGACGCATTAATCTAACCAGCCTAAAATCTAAATCACACACACCCACAAAGCCCTCTGATTAAGTATTACTTAGCGTACGTAAGCTAACTTTAAGTTG 35 18406903 0.985723309 12 33 260 0.96 1.681241237 0.02 0.285714286 0.5 35 2 0 48 3R:18406865-18406988 7 37 3904 FBgn0051122 626.0666667 23.62 36.17666667 0.059099137 1.566469094 1.022758684 3 3 3 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3R 18407070 18407076 - 3R_18407070_18407076_- 0.521223855 0.521223855 0.521223855 0 CG31122 FBtr0083653|FBtr0301432|FBtr0333831 18406629|18406629|18406062 18407464|18407881|18407881 3R - 18407015 18407147 3'utr CG31122 FlyBase G52318.1 GCTGATTTTACAGACCTCTCTTATTTTATACAAACACTCCATGCTATTTATTTGTAATTGATGAAAAGATTTGTGATTTGCGCACATGATATAAAGTAAACATCGTAGAGCAAGCACTGTAATCGTAGCGTGT 109 18407077 0.845944009 16 106 824 0.977272727 1.633468456 0.431818182 0.155963303 0.303030303 109 1 2 129 3R:18407015-18407147 7 CG31122 FBtr0333831|FBtr0301432|FBtr0083653 18406062|18406629|18406629 18407881|18407881|18407464 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 18407020 18407092 3'utr CG31122 FlyBase G39504.1 AATTGATGAAAAGATTTGTGATTTGCGCACATGATATAAAGTAAACATCGTAGAGCAAGCACTGTAATCGTAG 67 18407070 0.979814043 7 67 468 1 2.004321374 0.514851485 0.402985075 0.603960396 67 0 0 101 3R:18407020-18407092 7 79 3905 FBgn0051122 626.0666667 23.62 36.17666667 0.126184645 3.344623201 2.183728001 1 -6 -2.5 0.01 dme-miR-995-5p 6mer3-8 AATTCG 3R 18407244 18407249 - 3R_18407244_18407249_- 1 1 1 0 CG31122 FBtr0083653|FBtr0301432|FBtr0333831 18406629|18406629|18406062 18407464|18407881|18407881 3R - 18407184 18407259 3'utr CG31122 FlyBase G52319.1 GCATTTTTGTAATTCGTCCCAAACTGAAAGCAAAATCTCATCAGTGCAATAATATACATAATCCGAATATATATAT 18 18407247 0.985734683 5 15 134 0.80952381 1.230448921 0.142857143 0.166666667 0.285714286 18 4 0 17 3R:18407184-18407259 6 CG31122 FBtr0333831|FBtr0301432|FBtr0083653 18406062|18406629|18406629 18407881|18407881|18407464 AATTCG 6mer3-8 dme-miR-995-5p 3R - 18407217 18407276 3'utr CG31122 FlyBase G39505.1 TTGTATCTTTGATCATCGCATTTTTGTAATTCGTCCCAAACTGAAAGCAAAATCTCATCA 13 18407247 0.987769864 5 12 109 0.9375 1.176091259 0.0625 0.153846154 0.3125 13 1 0 15 3R:18407217-18407276 6 10 3906 FBgn0051122 626.0666667 23.62 36.17666667 0.01597274 0.423370025 0.276421266 -2 -2 -2 0.01 dme-miR-965-3p 7mer-m8 TACGCTT 3R 18407474 18407480 - 3R_18407474_18407480_- 0.620204855 0.620204855 0.620204855 0 CG31122 FBtr0301432|FBtr0333831 18406629|18406062 18407881|18407881 3R - 18407307 18407517 3'utr CG31122 FlyBase G52320.1 AGTGTCGCTCGAAACGCAAACTGCAGAAATTGTATTATACGCTTTGCCGTTAGATCTGTAGCCTAACTATATCTATGTGTACTTGTACGAGAGAAAGTTTCTTAGAACCACCAGCAGCATCAGCACTTAGCTTAAGTGGAGTCACACCTACCACGTCCTATATATATTATATGTATGTCCAGTCCCTTCGTCCCTTCATTTTTTGTACATG 77 18407474 0.986065146 27 70 615 0.917647059 1.591064607 0.129411765 0.090909091 0.176470588 77 6 1 78 3R:18407307-18407517 7 CG31122 FBtr0333831|FBtr0301432 18406062|18406629 18407881|18407881 TACGCTT 7mer-m8 dme-miR-965-3p 3R - 18407349 18407525 3'utr CG31122 FlyBase G39506.1 TCATCATCAGTGTCGCTCGAAACGCAAACTGCAGAAATTGTATTATACGCTTTGCCGTTAGATCTGTAGCCTAACTATATCTATGTGTACTTGTACGAGAGAAAGTTTCTTAGAACCACCAGCAGCATCAGCACTTAGCTTAAGTGGAGTCACACCTACCACGTCCTATATATATTA 65 18407473 0.986390105 20 61 519 0.948453608 1.662757832 0.164948454 0.384615385 0.587628866 65 4 1 92 3R:18407349-18407525 7 42.5 3907 FBgn0051122 626.0666667 23.62 36.17666667 0.067884144 1.799322608 1.174790381 -6 -7 -6.5 0.01 dme-bantam-3p 7mer-m8 TGATCTC 3R 18407706 18407712 - 3R_18407706_18407712_- 0.661615243 0.661615243 0.661615243 0 CG31122 FBtr0301432|FBtr0333831 18406629|18406062 18407881|18407881 3R - 18407662 18407776 3'utr CG31122 FlyBase G52321.1 CAGCAGCTGCTGGCTGCCGCCCCGGAGCTCGCGCTGGCCTCCTCATCGCGCCTGGCTGCGGCCCTGATCTCGTCGGCGGTGGCTCTGAGCGCCTCGTCCGCGAGCCTTGTAAATA 105 18407704 0.975645542 9 101 639 0.962962963 2.017033339 0.287037037 0.028571429 0.055555556 105 4 0 104 3R:18407662-18407776 7 CG31122 FBtr0333831|FBtr0301432 18406062|18406629 18407881|18407881 TGATCTC 7mer-m8 dme-bantam-3p 3R - 18407685 18407741 3'utr CG31122 FlyBase G39507.1 GGCCTCCTCATCGCGCCTGGCTGCGGCCCTGATCTCGTCGGCGGTGGCTCTGAGCGC 59 18407704 0.672863931 7 57 332 0.989130435 1.959041392 0.369565217 0.305084746 0.554347826 59 1 0 91 3R:18407685-18407741 7 77.5 3908 FBgn0051122 626.0666667 23.62 36.17666667 0.123788734 3.281117697 2.142264812 -8 -8 -8 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 18414739 18414744 - 3R_18414739_18414744_- 1 1 1 0 fru FBtr0083644 18414271 18416776 3R - 18414733 18414768 3'utr fru FlyBase G52329.1 CCACTACTACACACAGATTTATGTACCAAAAATGTA 12 18414746 0.796212113 3 11 72 0.923076923 1.079181246 0 0.083333333 0.153846154 12 1 0 12 3R:18414733-18414768 6 fru FBtr0083644 18414271 18416776 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 18414731 18414792 3'utr fru FlyBase G39512.1 AAATAGCACAGATGTTAAGGCAAACCACTACTACACACAGATTTATGTACCAAAAATGTAAT 8 18414748 0.970654933 7 8 46 1 1.041392685 0 0.25 0.454545455 8 0 0 11 3R:18414731-18414792 6 8 3909 FBgn0004652 1186.113333 24.98 38.30666667 0.006744718 0.320256205 0.208840933 2 4 3 0.01 dme-miR-970-3p 6mer3-8 TCTTAT 3R 18414974 18414979 - 3R_18414974_18414979_- 1 0.99956658 0.99978329 0.00030646 fru FBtr0083644 18414271 18416776 3R - 18414953 18415001 3'utr fru FlyBase G52330.1 CCTATTTTACTTAACTTTAAAATCTTATTTGATTTCCTAATTATAAATT 9 18414973 0.923973279 5 9 112 1 1 0 0.111111111 0.2 9 0 0 10 3R:18414953-18415001 6 fru FBtr0083644 18414271 18416776 TCTTAT 6mer3-8 dme-miR-970-3p 3R - 18414937 18414978 3'utr fru FlyBase G39513.1 CTTATTTGATTTCCTAATTATAAATTACGTGCATGTGCGTGT 6 18414973 0.790101742 5 6 57 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 3R:18414937-18414978 5 5.5 3910 FBgn0004652 1186.113333 24.98 38.30666667 0.004636994 0.220176141 0.143578141 -6 -6 -6 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3R 18415042 18415047 - 3R_18415042_18415047_- 1 1 1 0 fru FBtr0083644 18414271 18416776 3R - 18415024 18415066 3'utr fru FlyBase G52331.1 AAAATTGTTATCTTTCGGTCCAAAGCACAAAATGTATAAAATT 17 18415053 0.954872748 3 17 120 1 1.322219295 0.380952381 0.176470588 0.333333333 17 0 0 21 3R:18415024-18415066 6 fru FBtr0083644 18414271 18416776 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 18415028 18415062 3'utr fru FlyBase G39514.1 TTGTTATCTTTCGGTCCAAAGCACAAAATGTATAA 7 18415053 0.975142433 3 7 44 1 1.041392685 0.181818182 0.571428571 0.727272727 7 0 0 11 3R:18415028-18415062 6 12 3911 FBgn0004652 1186.113333 24.98 38.30666667 0.010117077 0.480384307 0.313261399 6 6 6 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 18415190 18415196 - 3R_18415190_18415196_- 0.754178249 0.754169154 0.754173701 6.36E-06 fru FBtr0083644|FBtr0083644|FBtr0083644 18414271|18414271|18414271 18416776|18416776|18416776 3R - 18415174 18415210 3'utr fru FlyBase G52333.1 AATATAAAATTAAATGTGATATTTTCGGCACAAAACT 8 18415188 0.981056465 5 6 71 0.727272727 0.602059991 0 0.25 0.454545455 8 2 1 8 3R:18415174-18415210 7 fru FBtr0083644|FBtr0083644|FBtr0083644 18414271|18414271|18414271 18416776|18416776|18416776 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 18415181 18415217 3'utr fru FlyBase G39515.1 AATATAAAATATAAAATTAAATGTGATATTTTCGGCA 11 18415187 0.650741089 6 11 98 1 1.176091259 0 0.272727273 0.466666667 11 0 0 15 3R:18415181-18415217 7 9.5 3912 FBgn0004652 1186.113333 24.98 38.30666667 0.008009353 0.380304243 0.247998608 -8 -9 -8.5 0.01 dme-miR-2b-2-5p 7mer-m8 TTGAAGA 3R 18415618 18415624 - 3R_18415618_18415624_- 0.631525999 0.631525999 0.631525999 0 fru FBtr0083641|FBtr0083644 18415471|18414271 18416776|18416776 3R - 18415576 18415656 3'utr fru FlyBase G52337.1 ATCACACTTTTGATTTTGTCCTATGCGTTAAGTTGAAGATTTTAGGATTAGCTCGAACCACTTGAACCACCTCACTTTTTT 27 18415595 0.84612146 9 20 168 0.833333333 1.096910013 0.133333333 0.074074074 0.166666667 27 4 1 25 3R:18415576-18415656 7 fru FBtr0083644|FBtr0083641 18414271|18415471 18416776|18416776 TTGAAGA 7mer-m8 dme-miR-2b-2-5p 3R - 18415571 18415634 3'utr fru FlyBase G39518.1 ATGCGTTAAGTTGAAGATTTTAGGATTAGCTCGAACCACTTGAACCACCTCACTTTTTTTTGTT 11 18415595 0.980155955 8 10 81 1 1.322219295 0.523809524 0.454545455 0.714285714 11 0 0 21 3R:18415571-18415634 7 6.5 3913 FBgn0004652 1186.113333 24.98 38.30666667 0.005480083 0.260208167 0.169683258 -29 -29 -29 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 3R 18415835 18415841 - 3R_18415835_18415841_- 0.620204266 0.620062086 0.620133176 0.000100551 fru FBtr0083641|FBtr0083644 18415471|18414271 18416776|18416776 3R - 18415773 18416033 3'utr fru FlyBase G52338.1 GAGGATCAGGATGAGGATCAGCCAGCACAGCAACAGTCACCCACAAATACTACTCATACGAAGGTCACATTAGGTTTTAGTTTACTTTAATTTGTAATGTCTAGATTTTAGTGTTAACCGATATGTTCTGCGGAGTAGGAAACGGATGAGGGCTACTCAACCAACTACAAAGAAATTTTCATATACCTCAAATGCATTTCAGTTTTATTGTTGATTGCTTTAATTTTAGTCTACGTAGTCAGTTAGCACTTATACATAAAG 95 18415838 0.984839239 30 87 701 0.916666667 1.51851394 0.203703704 0.127659574 0.240740741 94 7 2 99 3R:18415773-18416033 7 fru FBtr0083644|FBtr0083641 18414271|18415471 18416776|18416776 TGCATTT 7mer-m8 dme-miR-277-3p 3R - 18415814 18415933 3'utr fru FlyBase G39520.2 CTAGATTTTAGTGTTAACCGATATGTTCTGCGGAGTAGGAAACGGATGAGGGCTACTCAACCAACTACAAAGAAATTTTCATATACCTCAAATGCATTTCAGTTTTATTGTTGATTGCTT 53 18415839 0.963084463 14 50 360 0.917808219 1.826074803 0.219178082 0.339622642 0.520547945 53 6 0 67 3R:18415814-18415933 7 21 3914 FBgn0004652 1186.113333 24.98 38.30666667 0.017704885 0.840672538 0.548207449 -3 -2 -2.5 0.01 dme-miR-2a-2-5p 7mer-m1 GATGAGG 3R 18415883 18415889 - 3R_18415883_18415889_- 0.825582373 0.825582373 0.825582373 0 fru FBtr0083641|FBtr0083644 18415471|18414271 18416776|18416776 3R - 18415773 18416033 3'utr fru FlyBase G52338.1 GAGGATCAGGATGAGGATCAGCCAGCACAGCAACAGTCACCCACAAATACTACTCATACGAAGGTCACATTAGGTTTTAGTTTACTTTAATTTGTAATGTCTAGATTTTAGTGTTAACCGATATGTTCTGCGGAGTAGGAAACGGATGAGGGCTACTCAACCAACTACAAAGAAATTTTCATATACCTCAAATGCATTTCAGTTTTATTGTTGATTGCTTTAATTTTAGTCTACGTAGTCAGTTAGCACTTATACATAAAG 95 18415906 0.984839239 30 87 701 0.916666667 1.51851394 0.203703704 0.127659574 0.240740741 94 7 2 99 3R:18415773-18416033 7 fru FBtr0083644|FBtr0083641 18414271|18415471 18416776|18416776 GATGAGG 7mer-m1 dme-miR-2a-2-5p 3R - 18415814 18415933 3'utr fru FlyBase G39520.2 CTAGATTTTAGTGTTAACCGATATGTTCTGCGGAGTAGGAAACGGATGAGGGCTACTCAACCAACTACAAAGAAATTTTCATATACCTCAAATGCATTTCAGTTTTATTGTTGATTGCTT 53 18415905 0.963084463 14 50 360 0.917808219 1.826074803 0.219178082 0.339622642 0.520547945 53 6 0 67 3R:18415814-18415933 7 13 3915 FBgn0004652 1186.113333 24.98 38.30666667 0.010960167 0.520416333 0.339366516 17 16 16.5 0.01 dme-miR-12-5p 6mer3-8 AATACT 3R 18416167 18416172 - 3R_18416167_18416172_- 1 1 1 0 fru FBtr0083641|FBtr0083644 18415471|18414271 18416776|18416776 3R - 18416087 18416173 3'utr fru FlyBase G52339.1 TAATACTAGAGAGAGAAAGTCGAGGAGAATCGTTTTGAGCCGATTCAGCAAATTGGGGTCACTACCACATCACGCGGGGTCACCAGC 19 18416143 0.847314761 10 15 73 0.761904762 0.903089987 0.095238095 0.105263158 0.19047619 19 4 1 16 3R:18416087-18416173 6 fru FBtr0083644|FBtr0083641 18414271|18415471 18416776|18416776 AATACT 6mer3-8 dme-miR-12-5p 3R - 18416127 18416175 3'utr fru FlyBase G39522.1 ACTAATACTAGAGAGAGAAAGTCGAGGAGAATCGTTTTGAGCCGATTCA 7 18416168 0.922829976 5 6 31 0.909090909 1 0.363636364 0.428571429 0.636363636 7 1 0 10 3R:18416127-18416175 6 5.5 3916 FBgn0004652 1186.113333 24.98 38.30666667 0.004636994 0.220176141 0.143578141 -29 -4 -16.5 0.01 dme-miR-31a-5p 6mer3-8 TCTTGC 3R 18416530 18416535 - 3R_18416530_18416535_- 0.99990554 0.997519491 0.998712515 0.001687157 fru FBtr0083641|FBtr0083644 18415471|18414271 18416776|18416776 3R - 18416507 18416561 3'utr fru FlyBase G52342.1 AATCGCTGCAGTTCTAGGTGGATTTTTCTTGCATTTAGTCGTCGTCCAGTCGTGT 32 18416533 0.907746261 5 32 390 1 1.556302501 0.277777778 0.09375 0.194444444 32 0 0 36 3R:18416507-18416561 6 fru FBtr0083644|FBtr0083641 18414271|18415471 18416776|18416776 TCTTGC 6mer3-8 dme-miR-31a-5p 3R - 18416491 18416546 3'utr fru FlyBase G39525.1 AGGTGGATTTTTCTTGCATTTAGTCGTCGTCCAGTCGTGTACATTACCCACTAGCT 17 18416533 0.993504078 2 16 195 0.956521739 1.342422681 0.695652174 0.294117647 0.47826087 17 1 0 22 3R:18416491-18416546 6 23.5 3917 FBgn0004652 1186.113333 24.98 38.30666667 0.019812609 0.940752602 0.61347024 -2 -2 -2 0.01 dme-miR-79-3p 7mer-A1 AGCTTTA 3R 18416733 18416739 - 3R_18416733_18416739_- 0.823349562 0.823349562 0.823349562 0 fru FBtr0083641|FBtr0083644 18415471|18414271 18416776|18416776 3R - 18416728 18416777 stop_codon fru FlyBase G52343.1 AGGGCGTGGCCGGGGCCCAAGTGCAGCCCATCACCGCCAGCTTTACCAGC 10 18416747 0.836871863 3 10 26 1 1.079181246 0.166666667 0.2 0.333333333 10 0 0 12 3R:18416728-18416777 7 fru FBtr0083644|FBtr0083641 18414271|18415471 18416776|18416776 AGCTTTA 7mer-A1 dme-miR-79-3p 3R - 18416724 18416758 3'utr fru FlyBase G39526.1 AGTGCAGCCCATCACCGCCAGCTTTACCAGCAGCA 6 18416747 0.821158962 3 5 16 0.875 0.84509804 0 0.333333333 0.5 6 1 0 7 3R:18416724-18416758 7 5 3918 FBgn0004652 1186.113333 24.98 38.30666667 0.004215449 0.200160128 0.130525583 8 8 8 0.01 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 3R 18419992 18419999 - 3R_18419992_18419999_- 0.625364009 0.625364009 0.625364009 0 fru FBtr0330040|FBtr0083640|FBtr0083650|FBtr0083645 18418714|18418714|18418714|18418714 18422076|18422637|18422637|18422637 3R - 18419937 18420034 3'utr fru FlyBase G52348.1 TCGAAAGAATTCTATCATTTGTGTGGTATGCAAAATGGTGCTAAATCCAAATATACTTTAAAGTATACCGAGTAGAACGAGAGGAGGCCAGTACTCCT 68 18419999 0.981125282 10 65 467 0.948051948 1.86332286 0.337662338 0.132352941 0.233766234 68 4 0 73 3R:18419937-18420034 8 fru FBtr0083650|FBtr0083645|FBtr0083640|FBtr0330040 18418714|18418714|18418714|18418714 18422637|18422637|18422637|18422076 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 3R - 18419975 18420023 3'utr fru FlyBase G39529.1 CTATCATTTGTGTGGTATGCAAAATGGTGCTAAATCCAAATATACTTTA 32 18419999 0.885883284 4 31 215 0.975 1.591064607 0.275 0.21875 0.375 32 1 0 39 3R:18419975-18420023 8 45.5 3919 FBgn0004652 1186.113333 24.98 38.30666667 0.038360584 1.821457166 1.187782805 0 0 0 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 18420163 18420169 - 3R_18420163_18420169_- 0.754178629 0.75417869 0.754178659 7.07E-08 fru FBtr0330040|FBtr0330040|FBtr0330040|FBtr0083640|FBtr0083640|FBtr0083640|FBtr0083650|FBtr0083650|FBtr0083650|FBtr0083645|FBtr0083645|FBtr0083645 18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714 18422076|18422076|18422076|18422637|18422637|18422637|18422637|18422637|18422637|18422637|18422637|18422637 3R - 18420146 18420223 3'utr fru FlyBase G52350.1 ATTTTTAACGCTGTTTTGTTAAACAAAAATTTAAGAAATTTATCTATTATATGATGTGATAACTATAGTAAAACTAAA 38 18420172 0.651270559 12 30 348 0.840909091 1.568201724 0.045454545 0.105263158 0.227272727 38 7 0 37 3R:18420146-18420223 7 fru FBtr0083650|FBtr0083650|FBtr0083650|FBtr0083645|FBtr0083645|FBtr0083645|FBtr0083640|FBtr0083640|FBtr0083640|FBtr0330040|FBtr0330040|FBtr0330040 18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714 18422637|18422637|18422637|18422637|18422637|18422637|18422637|18422637|18422637|18422076|18422076|18422076 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 18420146 18420191 3'utr fru FlyBase G39531.1 AAGAAATTTATCTATTATATGATGTGATAACTATAGTAAAACTAAA 34 18420172 0.622556018 8 29 299 0.823529412 1.021189299 0 0.382352941 0.588235294 34 6 3 42 3R:18420146-18420191 7 32 3920 FBgn0004652 1186.113333 24.98 38.30666667 0.026978872 1.28102482 0.835363731 3 3 3 0.01 dme-miR-12-5p 6mer2-7 ATACTC 3R 18421268 18421273 - 3R_18421268_18421273_- 1 1 1 0 fru FBtr0330040|FBtr0083640|FBtr0083650|FBtr0083645 18418714|18418714|18418714|18418714 18422076|18422637|18422637|18422637 3R - 18421256 18421288 3'utr fru FlyBase G52355.1 CCGGAAACCACTCTGATACTCTATAGGAAATGA 19 18421275 0.73834928 3 18 90 0.956521739 1.342422681 0.260869565 0.210526316 0.347826087 19 1 0 22 3R:18421256-18421288 6 fru FBtr0083650|FBtr0083645|FBtr0083640|FBtr0330040 18418714|18418714|18418714|18418714 18422637|18422637|18422637|18422076 ATACTC 6mer2-7 dme-miR-12-5p 3R - 18421256 18421292 3'utr fru FlyBase G39535.1 CCACCCGGAAACCACTCTGATACTCTATAGGAAATGA 7 18421275 0.969082126 2 6 35 0.857142857 0.77815125 0.142857143 0 0 7 1 0 6 3R:18421256-18421292 6 12.5 3921 FBgn0004652 1186.113333 24.98 38.30666667 0.010538622 0.50040032 0.326313958 2 2 2 0.01 dme-miR-12-5p 7mer-A1 ATACTCA 3R 18422039 18422045 - 3R_18422039_18422045_- 0.823349562 0.823349562 0.823349562 0 fru FBtr0330040|FBtr0083640|FBtr0083650|FBtr0083645 18418714|18418714|18418714|18418714 18422076|18422637|18422637|18422637 3R - 18422015 18422075 3'utr fru FlyBase G52356.1 AACAGCAACAGCAGCAACAGCAACCAATTGATACTCAAAGCAAATGTAATTTAGACGAGAA 351 18422047 0.909494402 5 347 1100 0.990498812 2.620136055 0.042755344 0.179487179 0.315914489 351 4 0 417 3R:18422015-18422075 7 fru FBtr0083650|FBtr0083645|FBtr0083640|FBtr0330040 18418714|18418714|18418714|18418714 18422637|18422637|18422637|18422076 ATACTCA 7mer-A1 dme-miR-12-5p 3R - 18422022 18422072 3'utr fru FlyBase G39536.1 AGCAACAGCAGCAACAGCAACCAATTGATACTCAAAGCAAATGTAATTTAG 195 18422047 0.913703431 5 189 614 0.971061093 2.178976947 0.064308682 0.41025641 0.63022508 195 8 1 302 3R:18422022-18422072 7 271.5 3922 FBgn0004652 1186.113333 24.98 38.30666667 0.228898869 10.86869496 7.087539158 2 2 2 0.01 dme-miR-282-5p 6mer2-7 GAGGCT 3R 18422330 18422335 - 3R_18422330_18422335_- 0.998190654 0.999524573 0.998857613 0.00094321 fru FBtr0083640|FBtr0083650|FBtr0083645 18418714|18418714|18418714 18422637|18422637|18422637 3R - 18422284 18422373 3'utr fru FlyBase G52358.1 GATGAGAGCGACAATGAGCTGGAGGAGGAGCAGCAGATGAGGCTGAGCTTTGAGCGGTACATGGAGCAGCTGAAGCAGCTGGCGCCCTAC 44 18422336 0.998854242 4 44 158 1 1.707570176 0.31372549 0.136363636 0.254901961 44 0 0 51 3R:18422284-18422373 6 fru FBtr0083650|FBtr0083645|FBtr0083640 18418714|18418714|18418714 18422637|18422637|18422637 GAGGCT 6mer2-7 dme-miR-282-5p 3R - 18422316 18422360 3'utr fru FlyBase G39538.1 ATGAGCTGGAGGAGGAGCAGCAGATGAGGCTGAGCTTTGAGCGGT 18 18422336 0.982729511 2 18 68 1 1.431363764 0.259259259 0.388888889 0.592592593 18 0 0 27 3R:18422316-18422360 6 29.5 3923 FBgn0004652 1186.113333 24.98 38.30666667 0.024871148 1.180944756 0.77010094 1 1 1 0.01 dme-miR-276a-3p 8mer-A1 AGTTCCTA 3R 18430110 18430117 - 3R_18430110_18430117_- 0.637906983 0.637906983 0.637906983 0 fru FBtr0083646 18427478 18430823 3R - 18430078 18430129 5'utr fru FlyBase G52365.1 TCTCCGAATGATAGTTCCTAAGAGAAGTTAGACTCAAAGTGCTAGCTAGAGC 25 18430101 0.763177869 5 24 114 1 1.462397998 0.137931034 0.16 0.275862069 25 0 0 29 3R:18430078-18430129 8 fru FBtr0083646 18427478 18430823 AGTTCCTA 8mer-A1 dme-miR-276a-3p 3R - 18430028 18430140 5'utr fru FlyBase G39542.1 TTTATGGATATTCTCCGAATGATAGTTCCTAAGAGAAGTTAGACTCAAAGTGCTAGCTAGAGCAACAGATCAACACCTCTCCTACCAGAATATCTCTACATGCATATCTTTAT 25 18430101 0.966051891 8 24 136 0.956521739 1.166331422 0.043478261 0.6 0.782608696 25 0 2 44 3R:18430028-18430140 8 17.5 3924 FBgn0004652 1186.113333 24.98 38.30666667 0.014754071 0.700560448 0.456839541 -16 -16 -16 0.01 dme-miR-980-3p 8mer-A1 GGCAGCTA 3R 18431318 18431325 - 3R_18431318_18431325_- 0.668734347 0.668734347 0.668734347 0 fru FBtr0083647 18431231 18431446 3R - 18431303 18431350 5'utr fru FlyBase G52369.1 AATATATTTAGTAACCTAAGAACTTGGCAGCTACTATGAACAAAAGCA 119 18431326 0.83458356 6 115 727 0.95035461 1.826074803 0.014184397 0.168067227 0.29787234 119 6 1 134 3R:18431303-18431350 8 fru FBtr0083647 18431231 18431446 GGCAGCTA 8mer-A1 dme-miR-980-3p 3R - 18431303 18431350 5'utr fru FlyBase G39543.1 AATATATTTAGTAACCTAAGAACTTGGCAGCTACTATGAACAAAAGCA 63 18431326 0.819567414 6 61 363 0.968421053 1.963787827 0.063157895 0.333333333 0.557894737 63 3 0 92 3R:18431303-18431350 8 91 3925 FBgn0004652 1186.113333 24.98 38.30666667 0.076721168 3.642914331 2.375565611 1 1 1 0.01 dme-miR-986-5p 6mer2-7 TTCGAG 3R 18650585 18650590 - 3R_18650585_18650590_- 1 1 1 0 CG31224 FBtr0344327|FBtr0083691|FBtr0344326 18650119|18650119|18650119 18651140|18651140|18651140 3R - 18650567 18650626 3'utr CG31224 FlyBase G52398.1 AGTTAATTTAAGTTAGCCGAAATTGGTCTTAAAACTTTCGAGTTTTTCCAGAACTTGAGC 12 18650603 0.800637329 5 11 94 0.888888889 0.726998728 0.222222222 0.416666667 0.611111111 12 0 2 16 3R:18650567-18650626 6 CG31224 FBtr0344326|FBtr0083691|FBtr0344327 18650119|18650119|18650119 18651140|18651140|18651140 TTCGAG 6mer2-7 dme-miR-986-5p 3R - 18650565 18650631 3'utr CG31224 FlyBase G39566.1 ATACTAGTTAATTTAAGTTAGCCGAAATTGGTCTTAAAACTTTCGAGTTTTTCCAGAACTTGAGCAC 13 18650603 0.983097248 5 13 102 1 1.278753601 0.105263158 0.307692308 0.526315789 13 0 0 19 3R:18650565-18650631 6 6 3926 FBgn0051224 1247.72 20.83666667 31.93333333 0.004808771 0.287953927 0.187891441 13 13 13 0.01 dme-miR-92b-3p 8mer-A1 GTGCAATA 3R 18650739 18650746 - 3R_18650739_18650746_- 0.628916032 0.628916032 0.628916032 0 CG31224 FBtr0344327|FBtr0083691|FBtr0344326 18650119|18650119|18650119 18651140|18651140|18651140 3R - 18650702 18650770 3'utr CG31224 FlyBase G52400.1 TAGTAAAATGTTATACCTAGTTCAGTGCAATATACATCGATTAAATACTATATGCCGCGATACTTTTTC 16 18650750 0.767806301 6 15 119 0.952380952 1.301029996 0.047619048 0.1875 0.380952381 16 1 0 20 3R:18650702-18650770 8 CG31224 FBtr0344326|FBtr0083691|FBtr0344327 18650119|18650119|18650119 18651140|18651140|18651140 GTGCAATA 8mer-A1 dme-miR-92b-3p 3R - 18650733 18650761 3'utr CG31224 FlyBase G39567.1 GTTATACCTAGTTCAGTGCAATATACATC 8 18650749 0.668143395 5 7 51 0.818181818 0.954242509 0.090909091 0.25 0.454545455 8 2 0 9 3R:18650733-18650761 8 9.5 3927 FBgn0051224 1247.72 20.83666667 31.93333333 0.007613888 0.455927052 0.297494781 4 3 3.5 0.01 dme-miR-7-5p 6mer2-7 TCTTCC 3R 18650839 18650844 - 3R_18650839_18650844_- 1 1 1 0 CG31224 FBtr0344327|FBtr0083691|FBtr0344326 18650119|18650119|18650119 18651140|18651140|18651140 3R - 18650782 18650875 3'utr CG31224 FlyBase G52401.1 ACGTAGCTAAATGTGAAAGTGTTCCCCATTCTCTTCCTCCGGATTCGAATCACAATTCGCGTCAACCGCTTTAATCCCGTTTAGGTTTTAGATT 22 18650842 0.985943217 9 21 182 0.958333333 1.361727836 0.291666667 0.090909091 0.166666667 22 1 0 23 3R:18650782-18650875 6 CG31224 FBtr0344326|FBtr0083691|FBtr0344327 18650119|18650119|18650119 18651140|18651140|18651140 TCTTCC 6mer2-7 dme-miR-7-5p 3R - 18650782 18650861 3'utr CG31224 FlyBase G39568.1 GAAAGTGTTCCCCATTCTCTTCCTCCGGATTCGAATCACAATTCGCGTCAACCGCTTTAATCCCGTTTAGGTTTTAGATT 10 18650844 0.982479117 8 10 79 1 1.146128036 0.071428571 0.3 0.5 10 0 0 14 3R:18650782-18650861 6 10 3928 FBgn0051224 1247.72 20.83666667 31.93333333 0.008014619 0.479923212 0.313152401 -2 0 -1 0.01 dme-miR-190-5p 6mer3-8 ACATAT 3R 18650968 18650973 - 3R_18650968_18650973_- 1 1 1 0 CG31224 FBtr0344327|FBtr0083691|FBtr0344326 18650119|18650119|18650119 18651140|18651140|18651140 3R - 18650947 18651095 3'utr CG31224 FlyBase G52402.1 ATATAATCATTACCTAGGTAGTTGTTCATGACTCTTCTATGTGTGTACTGTGTGTGTCTGTGGTTAAAACAACAAAACAAAACAACAAATTAGTATTACCTATCGAACTATATATTTAGTTAACATATGCGATTGCCAATTCTTGTTGA 51 18651003 0.953493428 21 45 417 0.9 1.73239376 0.1 0.156862745 0.283333333 51 6 0 54 3R:18650947-18651095 6 CG31224 FBtr0344326|FBtr0083691|FBtr0344327 18650119|18650119|18650119 18651140|18651140|18651140 ACATAT 6mer3-8 dme-miR-190-5p 3R - 18650933 18651093 3'utr CG31224 FlyBase G39569.1 ATAATCATTACCTAGGTAGTTGTTCATGACTCTTCTATGTGTGTACTGTGTGTGTCTGTGGTTAAAACAACAAAACAAAACAACAAATTAGTATTACCTATCGAACTATATATTTAGTTAACATATGCGATTGCCAATTCTTGTTGATTAAACCAACAAGA 27 18651003 0.987107022 18 25 229 0.953488372 1.612783857 0.069767442 0.37037037 0.604651163 27 2 0 41 3R:18650933-18651093 6 9 3929 FBgn0051224 1247.72 20.83666667 31.93333333 0.007213157 0.431930891 0.281837161 30 30 30 0.01 dme-miR-8-3p 7mer-A1 AGTATTA 3R 18650998 18651004 - 3R_18650998_18651004_- 0.823349562 0.823349562 0.823349562 0 CG31224 FBtr0344327|FBtr0083691|FBtr0344326 18650119|18650119|18650119 18651140|18651140|18651140 3R - 18650947 18651095 3'utr CG31224 FlyBase G52402.1 ATATAATCATTACCTAGGTAGTTGTTCATGACTCTTCTATGTGTGTACTGTGTGTGTCTGTGGTTAAAACAACAAAACAAAACAACAAATTAGTATTACCTATCGAACTATATATTTAGTTAACATATGCGATTGCCAATTCTTGTTGA 51 18651006 0.953493428 21 45 417 0.9 1.73239376 0.1 0.156862745 0.283333333 51 6 0 54 3R:18650947-18651095 7 CG31224 FBtr0344326|FBtr0083691|FBtr0344327 18650119|18650119|18650119 18651140|18651140|18651140 AGTATTA 7mer-A1 dme-miR-8-3p 3R - 18650933 18651093 3'utr CG31224 FlyBase G39569.1 ATAATCATTACCTAGGTAGTTGTTCATGACTCTTCTATGTGTGTACTGTGTGTGTCTGTGGTTAAAACAACAAAACAAAACAACAAATTAGTATTACCTATCGAACTATATATTTAGTTAACATATGCGATTGCCAATTCTTGTTGATTAAACCAACAAGA 27 18651006 0.987107022 18 25 229 0.953488372 1.612783857 0.069767442 0.37037037 0.604651163 27 2 0 41 3R:18650933-18651093 7 9 3930 FBgn0051224 1247.72 20.83666667 31.93333333 0.007213157 0.431930891 0.281837161 2 2 2 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 18665277 18665283 + 3R_18665277_18665283_+ 0.801970437 0.801970437 0.801970437 0 Gos28 FBtr0083661|FBtr0083661|FBtr0083661 18665169|18665169|18665169 18665307|18665307|18665307 3R + 18665237 18665301 3'utr Gos28 FlyBase G43803.1 TTAGTTTGTTTTTTCCGACGGTATATGTGTATGATTAACTTGTGATAGCAATAAAATGTACTATA 67 18665274 0.66452229 13 61 524 0.898734177 1.374137094 0.063291139 0.164179104 0.291139241 67 6 2 71 3R:18665237-18665301 7 Gos28 FBtr0083661|FBtr0083661|FBtr0083661 18665169|18665169|18665169 18665307|18665307|18665307 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 18665251 18665302 3'utr Gos28 FlyBase G33101.1 CCGACGGTATATGTGTATGATTAACTTGTGATAGCAATAAAATGTACTATAT 32 18665276 0.671890215 8 28 253 0.888888889 0.903089987 0 0.34375 0.533333333 32 1 4 40 3R:18665251-18665302 7 44.5 3931 FBgn0044871 146.6666667 20.69333333 31.63666667 0.303409091 2.150451031 1.406595722 3 1 2 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 18674633 18674640 + 3R_18674633_18674640_+ 0.500120318 0.500120318 0.500120318 0 CG7702 FBtr0083665|FBtr0083664 18674410|18674410 18674679|18674679 3R + 18674606 18674648 3'utr CG7702 FlyBase G43809.1 TAGTGAAGCCATCGATGTTTGTGTATTGTACTTAAGATCCGCA 9 18674632 0.961283387 6 9 82 1 1.041392685 0.090909091 0.111111111 0.272727273 9 0 0 11 3R:18674606-18674648 8 CG7702 FBtr0083665|FBtr0083664 18674410|18674410 18674679|18674679 GTACTTAA 8mer-A1 dme-miR-252-5p 3R + 18674610 18674648 3'utr CG7702 FlyBase G33103.1 GAAGCCATCGATGTTTGTGTATTGTACTTAAGATCCGCA 6 18674632 0.988110251 3 5 56 1 1 0 0.333333333 0.6 6 0 0 10 3R:18674610-18674648 8 6.5 3932 FBgn0038638 520.81 26.77666667 41.05 0.012480559 0.242748662 0.158343484 1 1 1 0.01 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 18759343 18759350 - 3R_18759343_18759350_- 0.385560125 0.385560257 0.385560191 1.41E-07 CG7720 FBtr0083679|FBtr0301200|FBtr0301199|FBtr0339167|FBtr0301201|FBtr0083678 18759234|18759234|18759234|18759234|18759234|18759234 18759467|18759467|18759467|18759467|18759467|18759467 3R - 18759261 18759378 3'utr CG7720 FlyBase G52513.1 AGCCAAGTGTTTCATGTCTATAAAGATGCTGTGATTTTCTGTGCGCGACTGTTGTTGAGCAATTGCTCGCGCATTTCATTCGCATGTACTTAACGCATATGTGTGTGCGTGTCAGCAT 93 18759352 0.858397016 14 89 865 0.964285714 2.033423755 0.080357143 0.193548387 0.330357143 93 4 0 108 3R:18759261-18759378 8 CG7720 FBtr0301201|FBtr0083678|FBtr0301199|FBtr0339167|FBtr0083679|FBtr0301200 18759234|18759234|18759234|18759234|18759234|18759234 18759467|18759467|18759467|18759467|18759467|18759467 CTGTGATT 8mer-m1 dme-miR-308-3p 3R - 18759324 18759374 3'utr CG7720 FlyBase G39641.1 AAGTGTTTCATGTCTATAAAGATGCTGTGATTTTCTGTGCGCGACTGTTGT 69 18759352 0.867694423 8 68 678 0.981981982 2.037426498 0.081081081 0.376811594 0.612612613 69 2 0 109 3R:18759324-18759374 8 72.5 3933 FBgn0038652 105.2733333 4.686666667 7.096666667 0.688683427 15.46941679 10.21606388 2 2 2 0.01 dme-miR-2b-2-5p 6mer2-7 TGAAGA 3R 18908444 18908449 + 3R_18908444_18908449_+ 1 1 1 0 EndoA FBtr0083698|FBtr0334522|FBtr0083699 18908375|18908375|18908375 18910348|18910755|18910348 3R + 18908381 18908466 3'utr EndoA FlyBase G43823.1 TTCCTCATCCTGTTCCTCGTATTAATCCCGATCCCTAAACCAATCCCATCCTATCAAACTGGCTGAAGACGTACGTAGATCGCTGA 107 18908440 0.945543786 5 104 439 0.976 2.086359831 0.464 0.130841121 0.256 107 3 0 122 3R:18908381-18908466 6 EndoA FBtr0083699|FBtr0334522|FBtr0083698 18908375|18908375|18908375 18910348|18910755|18910348 TGAAGA 6mer2-7 dme-miR-2b-2-5p 3R + 18908422 18908496 3'utr EndoA FlyBase G33113.1 AATCCCATCCTATCAAACTGGCTGAAGACGTACGTAGATCGCTGATTGGAGAACAATAACCTTAATTGTTGGTTT 56 18908440 0.936496784 5 56 218 1 1.977723605 0.368421053 0.482142857 0.694736842 56 0 0 95 3R:18908422-18908496 6 78 3934 FBgn0038659 593.6566667 19.89333333 30.41666667 0.131389074 3.920911528 2.564383562 4 4 4 0.01 dme-miR-33-5p 6mer3-8 CAATGC 3R 18909107 18909112 + 3R_18909107_18909112_+ 1 1 1 0 EndoA FBtr0083698|FBtr0334522|FBtr0083699 18908375|18908375|18908375 18910348|18910755|18910348 3R + 18909097 18909136 3'utr EndoA FlyBase G43825.1 CAACCTACGCCAATGCGCTCTCTATGCAAATGTCCCTTTA 6 18909112 0.976850932 4 5 36 1 0.77815125 0 0 0 6 0 0 6 3R:18909097-18909136 6 EndoA FBtr0083699|FBtr0334522|FBtr0083698 18908375|18908375|18908375 18910348|18910755|18910348 CAATGC 6mer3-8 dme-miR-33-5p 3R + 18909097 18909134 3'utr EndoA FlyBase G33116.1 CAACCTACGCCAATGCGCTCTCTATGCAAATGTCCCTT 6 18909110 0.972798488 3 5 33 1 1 0.2 0.5 0.7 6 0 0 10 3R:18909097-18909134 6 4 3935 FBgn0038659 593.6566667 19.89333333 30.41666667 0.006737901 0.201072386 0.131506849 -5 -3 -4 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 18926553 18926558 + 3R_18926553_18926558_+ 1 1 1 0 Xrp1 FBtr0083700|FBtr0083702|FBtr0083703|FBtr0113246|FBtr0334523|FBtr0083701|FBtr0334524 18926503|18926503|18926503|18926503|18926503|18926503|18926503 18926849|18926849|18926849|18926849|18926849|18926849|18926989 3R + 18926323 18926713 stop_codon Xrp1 FlyBase G43845.1 CGCGCCGGAAGACGAAGGTGCGCGAAGAGGAGGAGAAGCGCGCCGAGGACACGCTATTGGCCGAGAATCTGCGACTGCGTGCCCGGGCCGACGAAGTGGCCTCCCGGGAACGGAAGTTCAAGAAGTACCTGATGGAGCGCCAGCGGCAGAAGAGCACTTACGTTAAGCAGGAGCAGGACTGAGATTCTCGTAGCCATAGAATAGAAATTGCGGAGCATAAGCCTGTCATAGTACCTATCGTCGTCATCCAATTGTTTAGTTAGTTAAGTTGTCGTTGAAGAAGTCGAGAAGCAGAAATCAAATTTCCATTTCCATGTGGACATCAGTTAAGCCACTTATTAGGCATAGTGATGGCGCCCATAGTGCGCGAGGAGTGTTTAACTTTAATTTT 441 18926540 0.974094915 57 399 2448 0.900191939 1.893021592 0.230326296 0.163265306 0.291746641 441 47 5 469 3R:18926323-18926713 6 Xrp1 FBtr0113246|FBtr0334523|FBtr0083701|FBtr0334524|FBtr0083700|FBtr0083702|FBtr0083703 18926503|18926503|18926503|18926503|18926503|18926503|18926503 18926849|18926849|18926849|18926989|18926849|18926849|18926849 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 18926424 18926572 stop_codon Xrp1 FlyBase G33136.2 TCCCGGGAACGGAAGTTCAAGAAGTACCTGATGGAGCGCCAGCGGCAGAAGAGCACTTACGTTAAGCAGGAGCAGGACTGAGATTCTCGTAGCCATAGAATAGAAATTGCGGAGCATAAGCCTGTCATAGTACCTATCGTCGTCATCCA 214 18926540 0.982234872 23 188 1019 0.890965732 2.456366033 0.230529595 0.35046729 0.566978193 214 35 0 286 3R:18926424-18926572 6 127 3936 FBgn0261113 7206.666667 268.3933333 411.66 0.017622572 0.47318612 0.30850702 13 13 13 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3R 18926772 18926777 + 3R_18926772_18926777_+ 1 1 1 0 Xrp1 FBtr0083700|FBtr0083702|FBtr0083703|FBtr0113246|FBtr0334523|FBtr0083701|FBtr0334524 18926503|18926503|18926503|18926503|18926503|18926503|18926503 18926849|18926849|18926849|18926849|18926849|18926849|18926989 3R + 18926732 18926791 3'utr Xrp1 FlyBase G43846.1 AAAACTAAAAAATTTTTATACCCACGGATATGTTTTTCGTCCAAAGCGTAATCAAAAAAA 326 18926766 0.639297498 9 316 2581 0.968831169 1.872738827 0.376623377 0.159509202 0.288311688 326 8 4 373 3R:18926732-18926791 6 Xrp1 FBtr0113246|FBtr0334523|FBtr0083701|FBtr0334524|FBtr0083700|FBtr0083702|FBtr0083703 18926503|18926503|18926503|18926503|18926503|18926503|18926503 18926849|18926849|18926849|18926989|18926849|18926849|18926849 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 18926738 18926792 3'utr Xrp1 FlyBase G33137.1 AAAAAATTTTTATACCCACGGATATGTTTTTCGTCCAAAGCGTAATCAAAAAAAA 187 18926766 0.63721212 7 181 1451 0.964157706 1.952631025 0.379928315 0.342245989 0.559139785 187 8 2 269 3R:18926738-18926792 6 251.5 3937 FBgn0261113 7206.666667 268.3933333 411.66 0.034898242 0.937057552 0.610941068 6 6 6 0.01 dme-miR-190-5p 6mer3-8 ACATAT 3R 19030113 19030118 + 3R_19030113_19030118_+ 0.714249843 0.999999941 0.857124892 0.202055833 P5cr FBtr0083713 19030071 19030159 3R + 19030075 19030140 3'utr P5cr FlyBase G43865.1 ATGTAATCCCCCGGAACATCCCCTTGCTCTCTACACATACATATAGTTAAACGCTTGATATTGTTA 14 19030098 0.772855112 4 14 91 1 1.176091259 0 0.071428571 0.133333333 14 0 0 15 3R:19030075-19030140 6 P5cr FBtr0083713 19030071 19030159 ACATAT 6mer3-8 dme-miR-190-5p 3R + 19030073 19030143 3'utr P5cr FlyBase G33152.1 AAATGTAATCCCCCGGAACATCCCCTTGCTCTCTACACATACATATAGTTAAACGCTTGATATTGTTATTA 10 19030098 0.981026188 4 10 75 1 1.278753601 0.052631579 0.4 0.684210526 10 0 0 19 3R:19030073-19030143 6 5.5 3938 FBgn0015781 64.69 6.733333333 10.21 0.085020869 0.816831683 0.538687561 15 15 15 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3R 19045871 19045876 - 3R_19045871_19045876_- 1 1 1 0 cdi FBtr0305321|FBtr0083716 19044880|19045692 19047703|19046616 3R - 19045842 19045913 3'utr cdi FlyBase G52542.1 TTTAAATAATTACATAGACTTACCGACTTGAGGTTTTAAGACTTAAAGCCCCCTTTCCCTCGAAAATTGTAC 59 19045878 0.704452325 10 55 400 0.940298507 1.799340549 0.089552239 0.118644068 0.223880597 59 4 0 63 3R:19045842-19045913 6 cdi FBtr0305321|FBtr0083716 19044880|19045692 19047703|19046616 AAGACT 6mer3-8 dme-miR-14-3p 3R - 19045821 19045912 3'utr cdi FlyBase G39657.2 TTAAATAATTACATAGACTTACCGACTTGAGGTTTTAAGACTTAAAGCCCCCTTTCCCTCGAAAATTGTACAGATGATCCCGGATCGATTTG 32 19045859 0.771551338 12 28 179 0.906976744 1.591064607 0.069767442 0.21875 0.418604651 32 4 0 39 3R:19045821-19045912 6 26 3939 FBgn0004876 813.04 17.12 26.29666667 0.031978746 1.518691589 0.988718469 2 -17 -7.5 0.01 dme-miR-276a-3p 7mer-A1 GTTCCTA 3R 19046228 19046234 - 3R_19046228_19046234_- 0.823349562 0.823165518 0.82325754 0.000130178 cdi FBtr0305321|FBtr0083716 19044880|19045692 19047703|19046616 3R - 19046211 19046251 3'utr cdi FlyBase G52543.1 AATCATACGTCGTACTGGTTCCTAGTCCTTCAAATTTACTT 129 19046236 0.742247222 9 126 960 0.98136646 2.198657087 0.080745342 0.224806202 0.378881988 129 3 0 158 3R:19046211-19046251 7 cdi FBtr0305321|FBtr0083716 19044880|19045692 19047703|19046616 GTTCCTA 7mer-A1 dme-miR-276a-3p 3R - 19046208 19046251 3'utr cdi FlyBase G39659.1 AATCATACGTCGTACTGGTTCCTAGTCCTTCAAATTTACTTCGC 97 19046236 0.717804134 9 96 738 0.979310345 2.152288344 0.117241379 0.360824742 0.572413793 97 3 0 142 3R:19046208-19046251 7 113 3940 FBgn0004876 813.04 17.12 26.29666667 0.138984552 6.60046729 4.297122576 2 2 2 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 3R 19046510 19046515 - 3R_19046510_19046515_- 1 1 1 0 cdi FBtr0305321|FBtr0083716 19044880|19045692 19047703|19046616 3R - 19046407 19046627 stop_codon cdi FlyBase G52545.1 AAGGCGGCTAGCTGTGGTGGGGACCTTGTGATGAAAACCCCGACCTGATTCATATTTAATAACTTATTTCTTCGATTCTTTGAGATTTTTATCCCCATACACGATTCCTTTATACCTGGCAGTACCACTTGATAAAAATACAAAAAATAATCGCAAATAATTTTGCCCACAAAAGTTGGTTAGTTTACGATGCCTAAAGGTTTAATTTGTAAGTAAATAGT 51 19046518 0.980927444 23 48 360 0.938461538 1.183269844 0.2 0.235294118 0.4 51 1 3 61 3R:19046407-19046627 6 cdi FBtr0305321|FBtr0083716 19044880|19045692 19047703|19046616 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 3R - 19046502 19046626 stop_codon cdi FlyBase G39660.1 AGGCGGCTAGCTGTGGTGGGGACCTTGTGATGAAAACCCCGACCTGATTCATATTTAATAACTTATTTCTTCGATTCTTTGAGATTTTTATCCCCATACACGATTCCTTTATACCTGGCAGTACC 32 19046518 0.823727324 13 31 227 0.978723404 1.662757832 0.404255319 0.34375 0.553191489 32 1 0 46 3R:19046502-19046626 6 9.5 3941 FBgn0004876 813.04 17.12 26.29666667 0.011684542 0.554906542 0.361262517 3 3 3 0.01 dme-miR-304-5p 7mer-m8 TGAGATT 3R 19046541 19046547 - 3R_19046541_19046547_- 0.620203442 0.620203442 0.620203442 0 cdi FBtr0305321|FBtr0083716 19044880|19045692 19047703|19046616 3R - 19046407 19046627 stop_codon cdi FlyBase G52545.1 AAGGCGGCTAGCTGTGGTGGGGACCTTGTGATGAAAACCCCGACCTGATTCATATTTAATAACTTATTTCTTCGATTCTTTGAGATTTTTATCCCCATACACGATTCCTTTATACCTGGCAGTACCACTTGATAAAAATACAAAAAATAATCGCAAATAATTTTGCCCACAAAAGTTGGTTAGTTTACGATGCCTAAAGGTTTAATTTGTAAGTAAATAGT 51 19046518 0.980927444 23 48 360 0.938461538 1.183269844 0.2 0.235294118 0.4 51 1 3 61 3R:19046407-19046627 7 cdi FBtr0305321|FBtr0083716 19044880|19045692 19047703|19046616 TGAGATT 7mer-m8 dme-miR-304-5p 3R - 19046502 19046626 stop_codon cdi FlyBase G39660.1 AGGCGGCTAGCTGTGGTGGGGACCTTGTGATGAAAACCCCGACCTGATTCATATTTAATAACTTATTTCTTCGATTCTTTGAGATTTTTATCCCCATACACGATTCCTTTATACCTGGCAGTACC 32 19046577 0.823727324 13 31 227 0.978723404 1.662757832 0.404255319 0.34375 0.553191489 32 1 0 46 3R:19046502-19046626 7 7 3942 FBgn0004876 813.04 17.12 26.29666667 0.008609663 0.408878505 0.266193434 -29 30 0.5 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 19046594 19046599 - 3R_19046594_19046599_- 0.99999971 0.999992927 0.999996318 4.81E-06 cdi FBtr0305321|FBtr0083716 19044880|19045692 19047703|19046616 3R - 19046407 19046627 stop_codon cdi FlyBase G52545.1 AAGGCGGCTAGCTGTGGTGGGGACCTTGTGATGAAAACCCCGACCTGATTCATATTTAATAACTTATTTCTTCGATTCTTTGAGATTTTTATCCCCATACACGATTCCTTTATACCTGGCAGTACCACTTGATAAAAATACAAAAAATAATCGCAAATAATTTTGCCCACAAAAGTTGGTTAGTTTACGATGCCTAAAGGTTTAATTTGTAAGTAAATAGT 51 19046601 0.980927444 23 48 360 0.938461538 1.183269844 0.2 0.235294118 0.4 51 1 3 61 3R:19046407-19046627 6 cdi FBtr0305321|FBtr0083716 19044880|19045692 19047703|19046616 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R - 19046502 19046626 stop_codon cdi FlyBase G39660.1 AGGCGGCTAGCTGTGGTGGGGACCTTGTGATGAAAACCCCGACCTGATTCATATTTAATAACTTATTTCTTCGATTCTTTGAGATTTTTATCCCCATACACGATTCCTTTATACCTGGCAGTACC 32 19046602 0.823727324 13 31 227 0.978723404 1.662757832 0.404255319 0.34375 0.553191489 32 1 0 46 3R:19046502-19046626 6 14.5 3943 FBgn0004876 813.04 17.12 26.29666667 0.017834301 0.846962617 0.551400684 2 3 2.5 0.01 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 19139080 19139087 - 3R_19139080_19139087_- 0.625364009 0.625364009 0.625364009 0 Ppcs FBtr0083752|FBtr0330044 19139052|19139052 19141595|19141415 3R - 19139068 19139108 3'utr Ppcs FlyBase G52566.1 TGTATTAAACTGGAAATGAAATAGCTTTAAATGTATAGACA 6 19139088 0.869527985 3 6 46 1 0.77815125 0.166666667 0 0 6 0 0 6 3R:19139068-19139108 8 Ppcs FBtr0083752|FBtr0330044 19139052|19139052 19141595|19141415 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R - 19139069 19139109 3'utr Ppcs FlyBase G39679.1 GTGTATTAAACTGGAAATGAAATAGCTTTAAATGTATAGAC 5 19139087 0.980026608 4 4 29 0.777777778 0.84509804 0.333333333 0.8 0.888888889 5 2 0 7 3R:19139069-19139109 8 5 3944 FBgn0261285 111.1666667 3.44 5.32 0.044977511 1.453488372 0.939849624 1 0 0.5 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 19139918 19139924 - 3R_19139918_19139924_- 0.658999527 0.658999527 0.658999527 0 Ppcs FBtr0083752|FBtr0330044 19139052|19139052 19141595|19141415 3R - 19139896 19139955 3'utr Ppcs FlyBase G52569.1 ATGTATAACTAGCCAAGTGTGCGAACAAGATGGCAGCTGCGAATGGATGGTATTTGCTTT 256 19139925 0.97985026 6 252 649 0.987341772 2.494154594 0.607594937 0.19140625 0.344936709 256 4 0 312 3R:19139896-19139955 7 Ppcs FBtr0083752|FBtr0330044 19139052|19139052 19141595|19141415 GGCAGCT 7mer-m8 dme-miR-980-3p 3R - 19139888 19139950 3'utr Ppcs FlyBase G39680.1 TAACTAGCCAAGTGTGCGAACAAGATGGCAGCTGCGAATGGATGGTATTTGCTTTTACTGGCA 201 19139925 0.983077454 7 199 451 0.993846154 2.509202522 0.593846154 0.437810945 0.652307692 201 2 0 323 3R:19139888-19139950 7 226 3945 FBgn0261285 111.1666667 3.44 5.32 2.032983508 65.69767442 42.48120301 1 1 1 0.01 dme-miR-184-3p 7mer-m8 TCCGTCC 3R 19140425 19140431 - 3R_19140425_19140431_- 0.661615243 0.661615243 0.661615243 0 Ppcs FBtr0083752|FBtr0330044 19139052|19139052 19141595|19141415 3R - 19140406 19140492 3'utr Ppcs FlyBase G52570.1 GAACCTCTGGCGAAGGGTTGGCGGTGGATTTGTATCCTCCTTTCATGGAGTTGTAACCACTTCCGTCCCGCCCGCATTTGTGGTTTA 276 19140432 0.817876031 7 274 1467 0.993650794 2.194514342 0.225396825 0.123188406 0.231746032 276 1 1 313 3R:19140406-19140492 7 Ppcs FBtr0083752|FBtr0330044 19139052|19139052 19141595|19141415 TCCGTCC 7mer-m8 dme-miR-184-3p 3R - 19140406 19140458 3'utr Ppcs FlyBase G39681.1 TCCTCCTTTCATGGAGTTGTAACCACTTCCGTCCCGCCCGCATTTGTGGTTTA 123 19140432 0.809536684 4 121 637 0.988304094 2.227886705 0.18128655 0.276422764 0.479532164 123 2 0 169 3R:19140406-19140458 7 196.5 3946 FBgn0261285 111.1666667 3.44 5.32 1.767616192 57.12209302 36.93609023 1 1 1 0.01 dme-miR-276a-3p 6mer3-8 AGTTCC 3R 19141331 19141336 - 3R_19141331_19141336_- 1 1 1 0 Ppcs FBtr0347007|FBtr0083752|FBtr0330044 19140994|19139052|19139052 19141595|19141595|19141415 3R - 19141181 19141363 3'utr Ppcs FlyBase G52573.1 TCGATTCATCCTTGCCCTTGGACTTTGAGTTCCCGCCACAATTTAGCTATCTATTTATGGTCGCGCCTCATAATTGAGGTGGCACCGCTCCATTAGTCCATTATCCTGTTGTTATTATTATTTTGGTATTAGTTAATGTATTGGCCCTATTGTTGTCCTGAGAAATGATGTCACTTGTATGTA 90 19141334 0.823114811 24 87 740 0.953703704 1.711807229 0.175925926 0.144444444 0.287037037 90 4 1 103 3R:19141181-19141363 6 Ppcs FBtr0347007|FBtr0083752|FBtr0330044 19140994|19139052|19139052 19141595|19141595|19141415 AGTTCC 6mer3-8 dme-miR-276a-3p 3R - 19141253 19141359 3'utr Ppcs FlyBase G39684.1 TTCATCCTTGCCCTTGGACTTTGAGTTCCCGCCACAATTTAGCTATCTATTTATGGTCGCGCCTCATAATTGAGGTGGCACCGCTCCATTAGTCCATTATCCTGTTG 46 19141334 0.799076176 15 44 355 0.971428571 1.531478917 0.085714286 0.391304348 0.6 46 1 1 68 3R:19141253-19141359 6 45.5 3947 FBgn0261285 111.1666667 3.44 5.32 0.409295352 13.22674419 8.552631579 -2 -2 -2 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 19148727 19148734 - 3R_19148727_19148734_- 0.650170399 0.650159457 0.650164928 7.71E-06 CG5835 FBtr0083751|FBtr0083751|FBtr0083751 19148630|19148630|19148630 19149037|19149037|19149037 3R - 19148654 19148757 3'utr CG5835 FlyBase G52579.1 AAGACCAATTAGTTAGTAAGTTTCTGTGATATTGTTCTAGAGATTCTTTTGTACGTCCTTGCACTAACAATACGCATAGAACCCACGTTGCTAATCGATAATAA 65 19148735 0.993584955 20 60 743 0.950617284 1.58546073 0.061728395 0.2 0.358024691 65 3 1 77 3R:19148654-19148757 8 CG5835 FBtr0083751|FBtr0083751|FBtr0083751 19148630|19148630|19148630 19149037|19149037|19149037 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 19148691 19148755 3'utr CG5835 FlyBase G39688.1 GACCAATTAGTTAGTAAGTTTCTGTGATATTGTTCTAGAGATTCTTTTGTACGTCCTTGCACTAA 47 19148735 0.660163736 11 42 567 0.893333333 1.348953548 0.093333333 0.468085106 0.666666667 47 6 2 67 3R:19148691-19148755 8 50.5 3948 FBgn0038682 101.3333333 9.206666667 14.04333333 0.498355263 5.485155684 3.596012343 1 1 1 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 3R 19154505 19154510 - 3R_19154505_19154510_- 1 1 1 0 CG11779 FBtr0083750|FBtr0335020|FBtr0083749 19154095|19154095|19154403 19155132|19155132|19155132 3R - 19154487 19154545 3'utr CG11779 FlyBase G52582.1 ATGGAATTCGCTCAGGGCGGCTTGGGCATCGTAAATTGACTGTACACACAGAATCCAAA 7 19154509 0.980416204 4 6 42 0.888888889 0.602059991 0.444444444 0.285714286 0.444444444 7 0 1 8 3R:19154487-19154545 6 CG11779 FBtr0083749|FBtr0335020|FBtr0083750 19154403|19154095|19154095 19155132|19155132|19155132 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 19154494 19154522 3'utr CG11779 FlyBase G39690.1 GGGCATCGTAAATTGACTGTACACACAGA 6 19154503 0.903547297 3 6 29 1 1.079181246 0.666666667 0.5 0.75 6 0 0 12 3R:19154494-19154522 6 5.5 3949 FBgn0038683 227.2933333 11.68666667 17.73333333 0.024197806 0.470621791 0.310150376 -1 -7 -4 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 3R 19169868 19169873 + 3R_19169868_19169873_+ 1 1 1 0 sqz FBtr0083733 19169821 19170576 3R + 19169811 19169917 stop_codon sqz FlyBase G43908.1 AAGGCGCAATAGTACAGGCCGTCAGGTCGGGGCCAAAAGAGGCAGCAACGATGACATTAGCTTAGGATCAACGTTTAAGTTGGTATGGATACAAGAGCGTGGTATTT 75 19169867 0.929515235 12 67 334 0.903225806 1.447158031 0.096774194 0.226666667 0.376344086 75 7 2 84 3R:19169811-19169917 6 sqz FBtr0083733 19169821 19170576 TAGCTT 6mer3-8 dme-miR-79-3p 3R + 19169812 19169886 stop_codon sqz FlyBase G33183.1 AGGCGCAATAGTACAGGCCGTCAGGTCGGGGCCAAAAGAGGCAGCAACGATGACATTAGCTTAGGATCAACGTTT 42 19169867 0.962060558 6 33 162 0.786666667 1.469822016 0.026666667 0.5 0.72 42 15 1 59 3R:19169812-19169886 6 40 3950 FBgn0010768 210.2766667 7.726666667 11.73666667 0.190225576 5.176876618 3.408122692 1 1 1 0.01 dme-miR-34-5p 7mer-m8 CACTGCC 3R 19170090 19170096 + 3R_19170090_19170096_+ 0.708953382 0.708953382 0.708953382 0 sqz FBtr0083733 19169821 19170576 3R + 19170077 19170226 3'utr sqz FlyBase G43909.1 AAATCAACTCCATCACTGCCCAAAACCAATAAGAAAATCAACTGCAATCCTACAGTTTCTGTGCTATTTTCAACTGCCATATGAAAGTAATATGTAATATCTAGATCAACTCAGGATTTTAAATACGATAATTATGCACACTTTTAGATA 321 19170089 0.807926662 22 304 1125 0.95 1.579783597 0.04 0.193146417 0.3525 321 11 9 380 3R:19170077-19170226 7 sqz FBtr0083733 19169821 19170576 CACTGCC 7mer-m8 dme-miR-34-5p 3R + 19170077 19170110 3'utr sqz FlyBase G33184.1 AAATCAACTCCATCACTGCCCAAAACCAATAAGA 155 19170089 0.796445737 3 140 378 0.916666667 1.597695186 0.00462963 0.324675325 0.518518519 154 14 4 198 3R:19170077-19170110 7 206.5 3951 FBgn0010768 210.2766667 7.726666667 11.73666667 0.982039535 26.72562554 17.5944334 1 1 1 0.01 dme-miR-33-5p 6mer2-7 AATGCA 3R 19170529 19170534 + 3R_19170529_19170534_+ 1 1 1 0 sqz FBtr0083733 19169821 19170576 3R + 19170483 19170564 3'utr sqz FlyBase G43911.1 GATATTTTCTACTTCTTAGGCCAGCTGAAAGAGAAATAGATTTGAAAATGCATGTACAATTCAACCAATAAAGATTGTAACT 483 19170519 0.933809063 16 470 2405 0.975652174 2.049992857 0.262608696 0.16563147 0.299130435 483 10 4 561 3R:19170483-19170564 6 sqz FBtr0083733 19169821 19170576 AATGCA 6mer2-7 dme-miR-33-5p 3R + 19170486 19170553 3'utr sqz FlyBase G33187.1 ATTTTCTACTTCTTAGGCCAGCTGAAAGAGAAATAGATTTGAAAATGCATGTACAATTCAACCAATAA 306 19170519 0.926602682 12 290 1459 0.953125 2.028367884 0.279017857 0.346405229 0.553571429 306 18 3 427 3R:19170486-19170553 6 307 3952 FBgn0010768 210.2766667 7.726666667 11.73666667 1.459981294 39.73252804 26.15734166 10 10 10 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3R 19178150 19178156 - 3R_19178150_19178156_- 0.443131018 0.443131018 0.443131018 0 CG5555 FBtr0083746|FBtr0332165 19178083|19178083 19178257|19178257 3R - 19178093 19178177 3'utr CG5555 FlyBase G52594.1 AAGGTTTATAACAGCTCTATATGTGATTTCCTTTGTATAACGAAAACCTAAGGATTAAATATAACTACTACTACGTAGAAAACCA 142 19178150 0.98510694 12 137 1194 0.962765957 1.78055732 0.053191489 0.253521127 0.436170213 142 5 2 181 3R:19178093-19178177 7 CG5555 FBtr0083746|FBtr0332165 19178083|19178083 19178257|19178257 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 19178106 19178177 3'utr CG5555 FlyBase G39700.1 AAGGTTTATAACAGCTCTATATGTGATTTCCTTTGTATAACGAAAACCTAAGGATTAAATATAACTACTACT 114 19178150 0.860162087 13 107 926 0.936781609 1.73506635 0.040229885 0.385964912 0.597701149 114 9 2 163 3R:19178106-19178177 7 94.5 3953 FBgn0038686 438.3333333 26.99 41.29333333 0.215589354 3.501296777 2.288505005 -6 -6 -6 0.01 dme-miR-317-3p 7mer-A1 GTGTTCA 3R 19405089 19405095 + 3R_19405089_19405095_+ 0.823349562 0.823349562 0.823349562 0 CG5316 FBtr0083759 19404158 19406294 3R + 19405063 19405101 3'utr CG5316 FlyBase G43918.1 CTTTCAAATTGCGTATATGATGCTCAGTGTTCAGGGATC 11 19405080 0.814293571 3 9 80 0.846153846 1.041392685 0.384615385 0.181818182 0.307692308 11 2 0 11 3R:19405063-19405101 7 CG5316 FBtr0083759 19404158 19406294 GTGTTCA 7mer-A1 dme-miR-317-3p 3R + 19405069 19405103 3'utr CG5316 FlyBase G33193.1 AATTGCGTATATGATGCTCAGTGTTCAGGGATCCA 7 19405080 0.815865428 3 7 53 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 3R:19405069-19405103 7 9 3954 FBgn0038704 1029.49 52.37666667 80.40666667 0.008742193 0.171832241 0.111931017 9 9 9 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3R 19406069 19406074 + 3R_19406069_19406074_+ 1 1 1 0 CG5316 FBtr0306251|FBtr0083759|FBtr0083758|FBtr0083760 19406001|19404158|19406001|19406001 19406294|19406294|19406294|19406294 3R + 19406024 19406111 3'utr CG5316 FlyBase G43923.1 AATTCCTAATTCCAAATTCCCAACAGCAGTTGGTAAACTACCAGAAAGACTTTAGATCCACACAAATCGTTCCCAAATTGGCATTTTG 29 19406076 0.799782392 7 29 151 1 1.544068044 0.285714286 0.172413793 0.314285714 29 0 0 35 3R:19406024-19406111 6 CG5316 FBtr0083758|FBtr0083760|FBtr0306251|FBtr0083759 19406001|19406001|19406001|19404158 19406294|19406294|19406294|19406294 AAGACT 6mer3-8 dme-miR-14-3p 3R + 19406024 19406111 3'utr CG5316 FlyBase G33197.1 AATTCCTAATTCCAAATTCCCAACAGCAGTTGGTAAACTACCAGAAAGACTTTAGATCCACACAAATCGTTCCCAAATTGGCATTTTG 20 19406076 0.976174764 8 16 105 0.8 0.903089987 0.133333333 0.45 0.633333333 20 4 2 24 3R:19406024-19406111 6 20 3955 FBgn0038704 1029.49 52.37666667 80.40666667 0.019427095 0.381849424 0.248735594 -7 -7 -7 0.01 dme-miR-14-3p 6mer2-7 AGACTG 3R 19606384 19606389 + 3R_19606384_19606389_+ 1 1 1 0 CG7342 FBtr0304745|FBtr0083777 19606277|19606277 19606475|19606475 3R + 19606362 19606408 3'utr CG7342 FlyBase G43952.1 ACAAGCAGCGGTATCAAAAATTAGACTGTATTTGTAGAATAAGTTTT 19 19606382 0.878180842 3 17 170 0.9 1.255272505 0.35 0.052631579 0.1 19 2 0 18 3R:19606362-19606408 6 CG7342 FBtr0304745|FBtr0083777 19606277|19606277 19606475|19606475 AGACTG 6mer2-7 dme-miR-14-3p 3R + 19606351 19606406 3'utr CG7342 FlyBase G33211.1 TATTTTGTAGTACAAGCAGCGGTATCAAAAATTAGACTGTATTTGTAGAATAAGTT 10 19606382 0.988301512 3 10 90 1 1.079181246 0.083333333 0.1 0.25 10 0 0 12 3R:19606351-19606406 6 13.5 3956 FBgn0038716 2 0.116666667 0.186666667 6.75 115.7142857 72.32142857 2 2 2 0.01 dme-miR-184-3p 6mer2-7 CCGTCC 3R 19616621 19616626 - 3R_19616621_19616626_- 1 1 1 0 CG6231 FBtr0083807|FBtr0083809|FBtr0083810|FBtr0334923|FBtr0334924|FBtr0083808 19616022|19616022|19616022|19616022|19616022|19616022 19616637|19616637|19616637|19616637|19616637|19616637 3R - 19616579 19616643 stop_codon CG6231 FlyBase G52643.1 CACTGAGGGGCGCCACCCCGTCCTAGTAGTTCGTAGTTTAGCTAACCAATTTCGCCTAGATCCTA 19 19616620 0.974149827 5 18 108 0.956521739 1.342422681 0.52173913 0.157894737 0.304347826 19 1 0 22 3R:19616579-19616643 6 CG6231 FBtr0334924|FBtr0083808|FBtr0083810|FBtr0334923|FBtr0083807|FBtr0083809 19616022|19616022|19616022|19616022|19616022|19616022 19616637|19616637|19616637|19616637|19616637|19616637 CCGTCC 6mer2-7 dme-miR-184-3p 3R - 19616585 19616642 stop_codon CG6231 FlyBase G39731.1 ACTGAGGGGCGCCACCCCGTCCTAGTAGTTCGTAGTTTAGCTAACCAATTTCGCCTAG 13 19616620 0.970105622 3 12 72 1 1.278753601 0.526315789 0.461538462 0.631578947 13 0 0 19 3R:19616585-19616642 6 13 3957 FBgn0038720 426.3333333 16.67 25.63 0.030492572 0.779844031 0.507218104 -6 -6 -6 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 19633731 19633736 - 3R_19633731_19633736_- 1 1 1 0 subdued FBtr0334922|FBtr0083806|FBtr0334921|FBtr0083805|FBtr0302492 19633416|19633416|19633416|19633416|19633416 19633928|19633928|19633928|19633928|19633928 3R - 19633668 19633756 3'utr subdued FlyBase G52653.1 ATTTAGGTAATCCAATTTTATGATCTGTTAATTGAAAATGATTTATTAAGTGGCTCAAACTTATATTTATGCAGCCCAAGTGAGTGCCA 21 19633735 0.990438205 6 21 213 1 1.361727836 0.043478261 0.095238095 0.173913043 21 0 0 23 3R:19633668-19633756 6 subdued FBtr0334922|FBtr0302492|FBtr0083805|FBtr0334921|FBtr0083806 19633416|19633416|19633416|19633416|19633416 19633928|19633928|19633928|19633928|19633928 TGATCT 6mer3-8 dme-bantam-3p 3R - 19633693 19633753 3'utr subdued FlyBase G39737.1 TAGGTAATCCAATTTTATGATCTGTTAATTGAAAATGATTTATTAAGTGGCTCAAACTTAT 15 19633736 0.988004308 7 13 134 0.96 1.380211242 0 0.466666667 0.68 15 1 0 24 3R:19633693-19633753 6 14.5 3958 FBgn0038721 940.6666667 28.25333333 43.49 0.0154146 0.51321378 0.333409979 -1 0 -0.5 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT 3R 19633885 19633890 - 3R_19633885_19633890_- 1 1 1 0 subdued FBtr0334922|FBtr0083806|FBtr0334921|FBtr0083805|FBtr0302492 19633416|19633416|19633416|19633416|19633416 19633928|19633928|19633928|19633928|19633928 3R - 19633856 19633912 3'utr subdued FlyBase G52654.1 AGTGATTATTTGTGTTACGAATGTTCCTTTCAGTCACTTAATTAGGCCTTAGCTATG 38 19633891 0.753159584 6 36 336 0.979591837 1.681241237 0.469387755 0.210526316 0.387755102 38 1 0 48 3R:19633856-19633912 6 subdued FBtr0334922|FBtr0302492|FBtr0083805|FBtr0334921|FBtr0083806 19633416|19633416|19633416|19633416|19633416 19633928|19633928|19633928|19633928|19633928 GTTCCT 6mer2-7 dme-miR-276a-3p 3R - 19633842 19633922 3'utr subdued FlyBase G39738.1 AATCATTCAAAGTGATTATTTGTGTTACGAATGTTCCTTTCAGTCACTTAATTAGGCCTTAGCTATGACACTTTTATTATT 37 19633884 0.670737474 10 36 306 0.967213115 1.770852012 0.344262295 0.459459459 0.672131148 37 2 0 59 3R:19633842-19633922 6 30.5 3959 FBgn0038721 940.6666667 28.25333333 43.49 0.032423813 1.079518641 0.701310646 1 -6 -2.5 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 19643286 19643292 - 3R_19643286_19643292_- 0.661615645 0.661615645 0.661615645 0 Vha13 FBtr0083804|FBtr0346100 19643256|19643016 19643507|19643507 3R - 19643265 19643322 3'utr Vha13 FlyBase G52668.1 CACTCGCGCGGGATTGTATTATCATTGTTTTGTGTTCTGCCCAATACACGTTGTTGTT 11 19643294 0.987991914 10 11 112 1 1.113943352 0.076923077 0.181818182 0.307692308 11 0 0 13 3R:19643265-19643322 7 Vha13 FBtr0346100|FBtr0083804 19643016|19643256 19643507|19643507 TGTGTTC 7mer-m8 dme-miR-317-3p 3R - 19643273 19643321 3'utr Vha13 FlyBase G39753.1 ACTCGCGCGGGATTGTATTATCATTGTTTTGTGTTCTGCCCAATACACG 6 19643309 0.985991727 3 6 55 1 0.954242509 0.333333333 0.333333333 0.555555556 6 0 0 9 3R:19643273-19643321 7 5.5 3960 FBgn0026753 1193.436667 217.27 330.9333333 0.004608539 0.025314125 0.016619662 2 17 9.5 0.01 dme-miR-283-5p 8mer-A1 TGATATTA 3R 19698583 19698590 + 3R_19698583_19698590_+ 0.592192292 0.592192292 0.592192292 0 Naam FBtr0335415 19698182 19698742 3R + 19698548 19698603 3'utr Naam FlyBase G43962.1 CTTAATGTTGTGCGCTGCACCTGTTTGAATCAAATTGATATTATATACAACCAACA 32 19698582 0.745180718 8 21 294 0.641025641 1.397940009 0.256410256 0.1875 0.333333333 32 14 0 25 3R:19698548-19698603 8 Naam FBtr0335415 19698182 19698742 TGATATTA 8mer-A1 dme-miR-283-5p 3R + 19698542 19698593 3'utr Naam FlyBase G33215.1 AGGGTTCTTAATGTTGTGCGCTGCACCTGTTTGAATCAAATTGATATTATAT 19 19698573 0.96710979 6 12 191 0.535714286 0.875061263 0.035714286 0.263157895 0.5 19 12 1 15 3R:19698542-19698593 8 24 3961 FBgn0051216 617.35 42.02 64.22 0.03887584 0.571156592 0.373715353 1 10 5.5 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 19698675 19698682 + 3R_19698675_19698682_+ 0.500120318 0.500120318 0.500120318 0 Naam FBtr0335415 19698182 19698742 3R + 19698652 19698701 3'utr Naam FlyBase G43963.1 TGCTTCAGTGAGAAATATTGTATGTACTTAAAAATGTTCAAATAAAAGTA 11 19698674 0.982829168 3 11 87 1 1.146128036 0.357142857 0.272727273 0.428571429 11 0 0 14 3R:19698652-19698701 8 Naam FBtr0335415 19698182 19698742 GTACTTAA 8mer-A1 dme-miR-252-5p 3R + 19698643 19698691 3'utr Naam FlyBase G33216.1 TAGAACAACTGCTTCAGTGAGAAATATTGTATGTACTTAAAAATGTTCA 6 19698674 0.984116513 2 6 44 1 0.903089987 0.25 0.166666667 0.375 6 0 0 8 3R:19698643-19698691 8 7.5 3962 FBgn0051216 617.35 42.02 64.22 0.0121487 0.178486435 0.116786048 1 1 1 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 19794796 19794801 - 3R_19794796_19794801_- 1 1 1 0 bnl FBtr0300123 19794587 19795490 3R - 19794771 19794831 3'utr bnl FlyBase G52678.1 AACGAGATAAATGCGTGAAATTATAGTTGTAGCTGTATGATGGATTTATTTATTTATTTAA 22 19794820 0.816672733 9 21 209 0.961538462 1.096910013 0.423076923 0.181818182 0.307692308 22 0 1 25 3R:19794771-19794831 6 bnl FBtr0300123 19794587 19795490 AGCTGT 6mer3-8 dme-miR-1008-3p 3R - 19794768 19794820 3'utr bnl FlyBase G39761.1 TGCGTGAAATTATAGTTGTAGCTGTATGATGGATTTATTTATTTATTTAAAAA 9 19794791 0.989056978 5 8 91 0.846153846 1.041392685 0.307692308 0.444444444 0.615384615 9 2 0 11 3R:19794768-19794820 6 13 3963 FBgn0014135 131.55 3.81 5.713333333 0.098821741 3.412073491 2.27537923 19 -10 4.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 19854169 19854174 - 3R_19854169_19854174_- 1 0.999999684 0.999999842 2.12E-07 Ire1 FBtr0113248 19853906 19854439 3R - 19854037 19854369 3'utr Ire1 FlyBase G52691.1 TTAATCGTGCAATTTGTGTATATGCAACTATTCCAAAATGATTCCCAATTCAGTTCTTAGCAAAAATATTCAACGGTAAGTAAACAAATGAAACTATTTTGTATACCAAGTAAGAATAATGTAGTGTGTCTTCTGTCGAATGCACGGAATTTAACTGTGATAATTTTTGATTTTGTTCAATGCCCAAGTGCAAGTTGATCTAGACAAATAGTTCGAGTTTTATATATAGTACCTAGACTTATTGTATATTTATGCATTAGTTAAGACACACCTACCTATCCCAACACTCCTCCCATTCGTGGAGATCCTTGACAAGCGAAGTTTTTAGTTTTT 873 19854175 0.834446738 64 805 6870 0.922800718 1.898049762 0.31508079 0.213058419 0.383303411 873 74 12 1028 3R:19854037-19854369 6 Ire1 FBtr0113248 19853906 19854439 TGATCT 6mer3-8 dme-bantam-3p 3R - 19854032 19854368 3'utr Ire1 FlyBase G39769.1 TAATCGTGCAATTTGTGTATATGCAACTATTCCAAAATGATTCCCAATTCAGTTCTTAGCAAAAATATTCAACGGTAAGTAAACAAATGAAACTATTTTGTATACCAAGTAAGAATAATGTAGTGTGTCTTCTGTCGAATGCACGGAATTTAACTGTGATAATTTTTGATTTTGTTCAATGCCCAAGTGCAAGTTGATCTAGACAAATAGTTCGAGTTTTATATATAGTACCTAGACTTATTGTATATTTATGCATTAGTTAAGACACACCTACCTATCCCAACACTCCTCCCATTCGTGGAGATCCTTGACAAGCGAAGTTTTTAGTTTTTATATC 625 19854175 0.942288322 59 570 4917 0.919732441 1.962211439 0.275362319 0.3248 0.529542921 625 64 8 825 3R:19854032-19854368 6 170 3964 FBgn0261984 824.9233333 24.51333333 37.36 0.206079757 6.93500136 4.550321199 1 1 1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 19854208 19854215 - 3R_19854208_19854215_- 0.65017135 0.65017135 0.65017135 0 Ire1 FBtr0113248|FBtr0113248|FBtr0113248 19853906|19853906|19853906 19854439|19854439|19854439 3R - 19854037 19854369 3'utr Ire1 FlyBase G52691.1 TTAATCGTGCAATTTGTGTATATGCAACTATTCCAAAATGATTCCCAATTCAGTTCTTAGCAAAAATATTCAACGGTAAGTAAACAAATGAAACTATTTTGTATACCAAGTAAGAATAATGTAGTGTGTCTTCTGTCGAATGCACGGAATTTAACTGTGATAATTTTTGATTTTGTTCAATGCCCAAGTGCAAGTTGATCTAGACAAATAGTTCGAGTTTTATATATAGTACCTAGACTTATTGTATATTTATGCATTAGTTAAGACACACCTACCTATCCCAACACTCCTCCCATTCGTGGAGATCCTTGACAAGCGAAGTTTTTAGTTTTT 873 19854219 0.834446738 64 805 6870 0.922800718 1.898049762 0.31508079 0.213058419 0.383303411 873 74 12 1028 3R:19854037-19854369 8 Ire1 FBtr0113248|FBtr0113248|FBtr0113248 19853906|19853906|19853906 19854439|19854439|19854439 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 19854032 19854368 3'utr Ire1 FlyBase G39769.1 TAATCGTGCAATTTGTGTATATGCAACTATTCCAAAATGATTCCCAATTCAGTTCTTAGCAAAAATATTCAACGGTAAGTAAACAAATGAAACTATTTTGTATACCAAGTAAGAATAATGTAGTGTGTCTTCTGTCGAATGCACGGAATTTAACTGTGATAATTTTTGATTTTGTTCAATGCCCAAGTGCAAGTTGATCTAGACAAATAGTTCGAGTTTTATATATAGTACCTAGACTTATTGTATATTTATGCATTAGTTAAGACACACCTACCTATCCCAACACTCCTCCCATTCGTGGAGATCCTTGACAAGCGAAGTTTTTAGTTTTTATATC 625 19854219 0.942288322 59 570 4917 0.919732441 1.962211439 0.275362319 0.3248 0.529542921 625 64 8 825 3R:19854032-19854368 8 416.5 3965 FBgn0261984 824.9233333 24.51333333 37.36 0.504895404 16.99075333 11.14828694 4 4 4 0.01 dme-miR-79-3p 7mer-A1 AGCTTTA 3R 19854403 19854409 - 3R_19854403_19854409_- 0.823349562 0.823349562 0.823349562 0 Ire1 FBtr0113248 19853906 19854439 3R - 19854391 19854463 stop_codon Ire1 FlyBase G52692.1 CTGCCACCTTCAACGCAGGATTAGGGCATAGACCCAACCAGATCAGATTAGACAAGCTTTAGTTGTAATCATT 51 19854416 0.797348263 10 48 290 0.93442623 1.45484486 0.114754098 0.156862745 0.295081967 51 3 1 57 3R:19854391-19854463 7 Ire1 FBtr0113248 19853906 19854439 AGCTTTA 7mer-A1 dme-miR-79-3p 3R - 19854380 19854456 stop_codon Ire1 FlyBase G39770.1 CTTCAACGCAGGATTAGGGCATAGACCCAACCAGATCAGATTAGACAAGCTTTAGTTGTAATCATTTATTAAGATAA 27 19854416 0.867403683 7 27 142 1 1.653212514 0.066666667 0.407407407 0.644444444 27 0 0 45 3R:19854380-19854456 7 28 3966 FBgn0261984 824.9233333 24.51333333 37.36 0.033942548 1.142235518 0.749464668 7 7 7 0.01 dme-miR-305-5p 7mer-m1 GTACAAT 3R 19866778 19866784 + 3R_19866778_19866784_+ 0.765586663 0.765586663 0.765586663 0 CG4686 FBtr0334307|FBtr0083816 19866556|19866556 19866869|19866869 3R + 19866765 19866806 3'utr CG4686 FlyBase G43974.2 TTGAGTTAAATGCGTACAATCTCTTAGTGTATATAGCAGGCT 46 19866788 0.675259965 5 42 362 0.943396226 1.397940009 0.283018868 0.086956522 0.20754717 46 2 1 50 3R:19866765-19866806 7 CG4686 FBtr0334307|FBtr0083816 19866556|19866556 19866869|19866869 GTACAAT 7mer-m1 dme-miR-305-5p 3R + 19866767 19866801 3'utr CG4686 FlyBase G33225.1 GAGTTAAATGCGTACAATCTCTTAGTGTATATAGC 24 19866788 0.722753941 3 22 185 0.931818182 1.612783857 0.363636364 0.583333333 0.772727273 24 3 0 41 3R:19866767-19866801 7 34.5 3967 FBgn0038739 315.5733333 42.71333333 65.49666667 0.109324827 0.807710317 0.526744364 -10 -10 -10 0.01 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 19899195 19899202 - 3R_19899195_19899202_- 0.385560641 0.385560641 0.385560641 0 CG4538 FBtr0083855|FBtr0344261|FBtr0344262 19898827|19897370|19898542 19899595|19899291|19899595 3R - 19899155 19899230 3'utr CG4538 FlyBase G52721.1 AAAGAATGTCCTCAATCCCCAAATGCATCTGTGATTCATAAACGACGAGCAGCGCAGTCTTTTGAGCCCGAAGCAA 37 19899203 0.982723831 6 34 252 0.926829268 1.278753601 0.097560976 0.108108108 0.195121951 37 2 1 38 3R:19899155-19899230 8 CG4538 FBtr0344262|FBtr0083855|FBtr0344261 19898542|19898827|19897370 19899595|19899595|19899291 CTGTGATT 8mer-m1 dme-miR-308-3p 3R - 19899189 19899225 3'utr CG4538 FlyBase G39789.1 ATGTCCTCAATCCCCAAATGCATCTGTGATTCATAAA 22 19899203 0.802509403 2 19 147 0.878787879 1.161368002 0 0.363636364 0.575757576 22 3 1 29 3R:19899189-19899225 8 27 3968 FBgn0038745 776.53 28.94666667 44.57666667 0.034770067 0.932749885 0.605698048 1 1 1 0.01 dme-miR-277-3p 6mer3-8 TGCATT 3R 19913220 19913225 + 3R_19913220_19913225_+ 1 1 1 0 RhoGAP92B FBtr0344352|FBtr0344351|FBtr0344353|FBtr0344354|FBtr0083821 19913083|19913083|19913083|19913083|19913083 19913730|19913730|19913730|19914272|19913730 3R + 19913084 19913315 3'utr RhoGAP92B FlyBase G44024.1 GAGGGGAATGAGTAGAGAGGACGCGCAATGGAAACGTGGTCAGAGTCATTAGGTGTTACTGTTTACTCGTTAAGACTTGAACGCACAGTAATATATATATATATTTCGAAATGATCCTTGCGGTAAGGAGACTTTGTGCATTATAGAGAGAAAAGCCTCTGCGTATTATGCATTTGTATTTTTGCCTTGTTCATAAGCAATCTAATTTGTACGTGTTTAGCCATATATAACA 424 19913243 0.810809433 46 405 2641 0.958333333 2.206825876 0.35515873 0.161137441 0.297619048 422 19 2 483 3R:19913084-19913315 6 RhoGAP92B FBtr0344352|FBtr0083821|FBtr0344354|FBtr0344353|FBtr0344351 19913083|19913083|19913083|19913083|19913083 19913730|19913730|19914272|19913730|19913730 TGCATT 6mer3-8 dme-miR-277-3p 3R + 19913067 19913395 stop_codon RhoGAP92B FlyBase G33264.1 TGGAAGTCCTCGGACTAGAGGGGAATGAGTAGAGAGGACGCGCAATGGAAACGTGGTCAGAGTCATTAGGTGTTACTGTTTACTCGTTAAGACTTGAACGCACAGTAATATATATATATATTTCGAAATGATCCTTGCGGTAAGGAGACTTTGTGCATTATAGAGAGAAAAGCCTCTGCGTATTATGCATTTGTATTTTTGCCTTGTTCATAAGCAATCTAATTTGTACGTGTTTAGCCATATATAACAATATCACGCGATATCCATAACGTATATGTATGCATATATAGTCTTTAGTAGGCCACCATAAATCAATTGTCGAAATTCGA 314 19913243 0.976419113 49 295 1904 0.943107221 1.78937923 0.369803063 0.331210191 0.5404814 314 20 6 431 3R:19913067-19913395 6 140 3969 FBgn0038747 1846.786667 74.18 113.18 0.075807348 1.887301159 1.236967662 -23 -23 -23 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3R 19913530 19913536 + 3R_19913530_19913536_+ 0.521223855 0.521223855 0.521223855 0 RhoGAP92B FBtr0344352|FBtr0344351|FBtr0344353|FBtr0344354|FBtr0083821 19913083|19913083|19913083|19913083|19913083 19913730|19913730|19913730|19914272|19913730 3R + 19913341 19913548 3'utr RhoGAP92B FlyBase G44025.1 ATGTATGCATATATAGTCTTTAGTAGGCCACCATAAATCAATTGTCGAAATTCGATTTGTTAGCCCAAGCCAGCTCTCAATTGTTAATCCTTGTTTGAAAGGTTGTGATACTTCAGAAAGGTTTTGTGTTTCCTTAATTTTTTGCATTGCTCTTGAGTACGTTTTGTTAACTTCTCCAACGAAAGACATTGTGATTTCCTTTTATTAA 185 19913536 0.70833306 33 172 1511 0.934782609 1.48734042 0.156521739 0.183783784 0.343478261 185 9 6 215 3R:19913341-19913548 7 RhoGAP92B FBtr0344352|FBtr0083821|FBtr0344354|FBtr0344353|FBtr0344351 19913083|19913083|19913083|19913083|19913083 19913730|19913730|19914272|19913730|19913730 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 19913476 19913552 3'utr RhoGAP92B FlyBase G33265.2 AATTTTTTGCATTGCTCTTGAGTACGTTTTGTTAACTTCTCCAACGAAAGACATTGTGATTTCCTTTTATTAAAAGT 62 19913530 0.793786307 10 58 489 0.98 1.991226076 0.03 0.370967742 0.61 62 2 0 98 3R:19913476-19913552 7 65.5 3970 FBgn0038747 1846.786667 74.18 113.18 0.035467009 0.882987328 0.578724156 -6 0 -3 0.01 dme-miR-252-5p 6mer3-8 GTACTT 3R 19913650 19913655 + 3R_19913650_19913655_+ 1 1 1 0 RhoGAP92B FBtr0344352|FBtr0344351|FBtr0344353|FBtr0344354|FBtr0083821 19913083|19913083|19913083|19913083|19913083 19913730|19913730|19913730|19914272|19913730 3R + 19913623 19913705 3'utr RhoGAP92B FlyBase G44026.1 CATTGAATTATCATTTCGCTGCGCGATGTACTTTACTTTGTATCTTTGCTTTATTAATTTGTAATGCAATTATTATTATTTTT 124 19913668 0.899213631 12 121 1667 0.98 2.167317335 0.173333333 0.185483871 0.326666667 124 3 0 147 3R:19913623-19913705 6 RhoGAP92B FBtr0344352|FBtr0083821|FBtr0344354|FBtr0344353|FBtr0344351 19913083|19913083|19913083|19913083|19913083 19913730|19913730|19914272|19913730|19913730 GTACTT 6mer3-8 dme-miR-252-5p 3R + 19913610 19913689 3'utr RhoGAP92B FlyBase G33266.1 CGAAGTACATTTTCATTGAATTATCATTTCGCTGCGCGATGTACTTTACTTTGTATCTTTGCTTTATTAATTTGTAATGC 98 19913668 0.850200994 18 93 1229 0.953488372 1.48784512 0.240310078 0.244897959 0.426356589 98 3 3 123 3R:19913610-19913689 6 31.5 3971 FBgn0038747 1846.786667 74.18 113.18 0.017056653 0.424642761 0.278317724 -18 -18 -18 0.01 dme-miR-970-3p 8mer-A1 TCTTATGA 3R 19913878 19913885 + 3R_19913878_19913885_+ 0.630790218 0.630790218 0.630790218 0 RhoGAP92B FBtr0344354 19913083 19914272 3R + 19913850 19913890 3'utr RhoGAP92B FlyBase G44028.1 GCGCGTAGTGTATGTTAGAATGTGGATCTCTTATGAAATTG 11 19913880 0.864861084 3 11 93 1 1.079181246 0.333333333 0.090909091 0.166666667 11 0 0 12 3R:19913850-19913890 8 RhoGAP92B FBtr0344354 19913083 19914272 TCTTATGA 8mer-A1 dme-miR-970-3p 3R + 19913856 19913884 3'utr RhoGAP92B FlyBase G33268.1 AGTGTATGTTAGAATGTGGATCTCTTATG 6 19913880 0.70697278 3 6 55 1 1.041392685 0.454545455 0.666666667 0.818181818 6 0 0 11 3R:19913856-19913884 7 8.5 3972 FBgn0038747 1846.786667 74.18 113.18 0.004602589 0.114586142 0.075101608 -2 -2 -2 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3R 20018636 20018641 - 3R_20018636_20018641_- 1 1 1 0 CG4433 FBtr0344139|FBtr0083843|FBtr0307345 20018267|20018580|20018580 20018985|20018985|20018985 3R - 20018598 20018697 3'utr CG4433 FlyBase G52744.1 CTTTAATTCTTATTAGTTAGCTCTAATTATTATTTATACTCAGTCCAAGCAATGTTCCAAAGTGTGCGATGTAGTCAAGTGCTTTAAAATTAAATTAAAC 55 20018645 0.812052902 11 54 354 1 1.832508913 0.029411765 0.236363636 0.382352941 55 0 0 68 3R:20018598-20018697 6 CG4433 FBtr0307345|FBtr0344139|FBtr0083843 20018580|20018267|20018580 20018985|20018985|20018985 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 20018607 20018663 3'utr CG4433 FlyBase G39807.1 TATACTCAGTCCAAGCAATGTTCCAAAGTGTGCGATGTAGTCAAGTGCTTTAAAATT 29 20018645 0.839256805 8 27 168 0.956521739 1.643452676 0.086956522 0.413793103 0.630434783 29 2 0 44 3R:20018607-20018663 6 33 3973 FBgn0038763 673 36.29333333 55.97666667 0.049034175 0.909257899 0.589531352 4 4 4 0.01 dme-miR-932-5p 6mer2-7 GAATTG 3R 20018957 20018962 - 3R_20018957_20018962_- 1 1 1 0 CG4433 FBtr0344139|FBtr0083843|FBtr0307345 20018267|20018580|20018580 20018985|20018985|20018985 3R - 20018895 20018981 3'utr CG4433 FlyBase G52747.1 AGGAGGAGGGCGAGCGATTGAATTGCAAAAGACAAACTACCTTCATGATCGGATGCTCCGCTCCGAGTGGCAGAGCAAGTGGTTTTT 14 20018963 0.95868457 7 13 63 0.941176471 0.903089987 0.294117647 0.214285714 0.352941176 14 0 1 16 3R:20018895-20018981 6 CG4433 FBtr0307345|FBtr0344139|FBtr0083843 20018580|20018267|20018580 20018985|20018985|20018985 GAATTG 6mer2-7 dme-miR-932-5p 3R - 20018895 20019007 stop_codon CG4433 FlyBase G39808.1 AATGCAGATACATGACAACTAACAGGAGGAGGAGGGCGAGCGATTGAATTGCAAAAGACAAACTACCTTCATGATCGGATGCTCCGCTCCGAGTGGCAGAGCAAGTGGTTTTT 14 20018963 0.982817464 7 13 48 0.904761905 1.278753601 0.047619048 0.357142857 0.571428571 14 2 0 19 3R:20018895-20019007 6 6 3974 FBgn0038763 673 36.29333333 55.97666667 0.008915305 0.165319618 0.107187519 1 1 1 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3R 20300790 20300796 + 3R_20300790_20300796_+ 0.808793293 0.808818836 0.808806065 1.80E-05 cic FBtr0305028|FBtr0305028|FBtr0334306|FBtr0334306|FBtr0334305|FBtr0334305|FBtr0305026|FBtr0305026|FBtr0305029|FBtr0305029|FBtr0305027|FBtr0305027 20300713|20300713|20300713|20300713|20300626|20300626|20300626|20300626|20300626|20300626|20300626|20300626 20301377|20301377|20301377|20301377|20303942|20303942|20301377|20301377|20300954|20300954|20301377|20301377 3R + 20300750 20300792 3'utr cic FlyBase G44090.1 CAGGACAGGACAATGGATTGTTTGCTGCAAGTGACAAAATTAC 30 20300770 0.882201081 7 28 187 0.921052632 1.06694679 0.342105263 0.2 0.368421053 30 1 2 35 3R:20300750-20300792 3 cic FBtr0305029|FBtr0305029|FBtr0305027|FBtr0305027|FBtr0334305|FBtr0334305|FBtr0305026|FBtr0305026|FBtr0305028|FBtr0305028|FBtr0334306|FBtr0334306 20300626|20300626|20300626|20300626|20300626|20300626|20300626|20300626|20300713|20300713|20300713|20300713 20300954|20300954|20301377|20301377|20303942|20303942|20301377|20301377|20301377|20301377|20301377|20301377 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3R + 20300746 20300846 3'utr cic FlyBase G33311.1 GGGACAGGACAGGACAATGGATTGTTTGCTGCAAGTGACAAAATTACTTAAGGATAGTAAACGAATCGACAACAACAATTGCAGCAACGCAGACTCACAAA 31 20300770 0.965997387 11 30 156 0.978723404 1.662757832 0.340425532 0.290322581 0.531914894 31 1 0 46 3R:20300746-20300846 7 2 3975 FBgn0262582 2700.526667 30.66 46.83666667 0.000740596 0.065231572 0.042701587 20 20 20 0.01 dme-miR-999-3p 6mer2-7 GTTAAC 3R 20300905 20300910 + 3R_20300905_20300910_+ 1 0.999980405 0.999990202 1.39E-05 cic FBtr0305028|FBtr0334306|FBtr0334305|FBtr0305026|FBtr0305029|FBtr0305027 20300713|20300713|20300626|20300626|20300626|20300626 20301377|20301377|20303942|20301377|20300954|20301377 3R + 20300848 20300921 3'utr cic FlyBase G44091.1 CGAAACGGATGTGCAACAAAGCTCACACTTAGCAAACGCTCATGCATCAGATGCATGGTTAACTAGTTTTTATT 11 20300876 0.954373767 8 11 54 1 1.113943352 0.076923077 0.181818182 0.307692308 11 0 0 13 3R:20300848-20300921 6 cic FBtr0305029|FBtr0305027|FBtr0334305|FBtr0305026|FBtr0305028|FBtr0334306 20300626|20300626|20300626|20300626|20300713|20300713 20300954|20301377|20303942|20301377|20301377|20301377 GTTAAC 6mer2-7 dme-miR-999-3p 3R + 20300848 20300943 3'utr cic FlyBase G33312.1 CGAAACGGATGTGCAACAAAGCTCACACTTAGCAAACGCTCATGCATCAGATGCATGGTTAACTAGTTTTTATTATTAACTGCTAATAGCGAGGAA 19 20300876 0.831702435 11 17 106 0.914285714 1.204119983 0.2 0.526315789 0.742857143 19 2 1 32 3R:20300848-20300943 6 4.5 3976 FBgn0262582 2700.526667 30.66 46.83666667 0.001666342 0.146771037 0.096078571 29 29 29 0.01 dme-miR-932-5p 6mer2-7 GAATTG 3R 20301533 20301538 + 3R_20301533_20301538_+ 1 1 1 0 cic FBtr0334305 20300626 20303942 3R + 20301442 20301549 3'utr cic FlyBase G44096.1 CGCACATCTACAAGCGCTTTTAAACTGTTTGCTTTTGTTCTCAAAGTTTATGCAACACGCGAACCTTTTTAAATTGTATGTACATTTCCTTGAATTGGCTTTTTACAC 18 20301510 0.986352539 12 16 139 0.947368421 1.255272505 0.368421053 0.055555556 0.105263158 18 1 0 18 3R:20301442-20301549 6 cic FBtr0334305 20300626 20303942 GAATTG 6mer2-7 dme-miR-932-5p 3R + 20301418 20301562 3'utr cic FlyBase G33315.1 AAAACCCCCAAACTAACACCCAATCGCACATCTACAAGCGCTTTTAAACTGTTTGCTTTTGTTCTCAAAGTTTATGCAACACGCGAACCTTTTTAAATTGTATGTACATTTCCTTGAATTGGCTTTTTACACTGTTGTCTAATTG 18 20301536 0.98932963 11 16 162 1 1.361727836 0.086956522 0.277777778 0.434782609 18 0 0 23 3R:20301418-20301562 6 6.5 3977 FBgn0262582 2700.526667 30.66 46.83666667 0.002406938 0.212002609 0.138780158 23 -3 10 0.01 dme-miR-7-5p 8mer-A1 GTCTTCCA 3R 20301716 20301723 + 3R_20301716_20301723_+ 0.675381664 0.675381664 0.675381664 0 cic FBtr0334305 20300626 20303942 3R + 20301608 20301738 3'utr cic FlyBase G44097.1 TAAATTGTAAACATACCGAAAAATAAACTCTAAAAAGAAAATAATTCAAAAAACTTATTACCGACGATTGAAAGAATACAAACCAGAGAGAGAATGAGAGAACTAACTGTCTTCCACTGTTGCTGCAATAT 384 20301702 0.928908577 21 359 1960 0.939953811 1.831443159 0.233256351 0.1171875 0.217090069 384 21 5 407 3R:20301608-20301738 8 cic FBtr0334305 20300626 20303942 GTCTTCCA 8mer-A1 dme-miR-7-5p 3R + 20301647 20301850 3'utr cic FlyBase G33316.1 AATAATTCAAAAAACTTATTACCGACGATTGAAAGAATACAAACCAGAGAGAGAATGAGAGAACTAACTGTCTTCCACTGTTGCTGCAATATACTATTTAATATTGTTTACCATTTCGGTTCGATTAAATTTAGTTGTAAATTAATGTTTTAAGTATGGACTGCATTTTATTCATATGCAAAATTCTGTTCATTGTGAGTTGTT 221 20301702 0.9341476 31 208 1341 0.93993994 1.893484346 0.243243243 0.371040724 0.582582583 221 17 3 313 3R:20301647-20301850 8 231 3978 FBgn0262582 2700.526667 30.66 46.83666667 0.08553887 7.534246575 4.932033307 14 14 14 0.01 dme-miR-184-5p 6mer3-8 TGATAA 3R 20302361 20302366 + 3R_20302361_20302366_+ 1 1 1 0 cic FBtr0334305 20300626 20303942 3R + 20302353 20302406 3'utr cic FlyBase G44100.1 ATTTTATATGATAAAAAGCGAATGGCCGTAAACTGTAGCGTGTTAATGTTAAAA 548 20302375 0.983710462 9 540 2390 0.990566038 2.100370545 0.391509434 0.133211679 0.253144654 548 2 4 630 3R:20302353-20302406 6 cic FBtr0334305 20300626 20303942 TGATAA 6mer3-8 dme-miR-184-5p 3R + 20302350 20302401 3'utr cic FlyBase G33319.2 GAAATTTTATATGATAAAAAGCGAATGGCCGTAAACTGTAGCGTGTTAATGT 342 20302375 0.981872 8 337 1404 0.992263056 2.409087369 0.468085106 0.350877193 0.570599613 342 3 1 513 3R:20302350-20302401 6 356 3979 FBgn0262582 2700.526667 30.66 46.83666667 0.131826138 11.61121983 7.600882499 -14 -14 -14 0.01 dme-miR-307a-3p 7mer-A1 GTTGTGA 3R 20323684 20323690 + 3R_20323684_20323690_+ 0.733843758 0.431734393 0.582789076 0.213623605 CG42668 FBtr0306634|FBtr0302668|FBtr0302670|FBtr0302667|FBtr0306633|FBtr0302673|FBtr0303586|FBtr0302669 20323448|20323448|20323448|20323448|20323448|20323448|20323448|20323448 20324196|20324196|20324196|20324196|20324196|20324196|20324196|20324196 3R + 20323579 20323726 3'utr CG42668 FlyBase G44126.1 GACAACGTATATATACTTTACTGAATTGTACATTTGGTCCTACTCAAATGCCTTCGCACGCTGCCAGATATATAAGCCCGACCGAGGCGCGTGGCCAGAACATCCGTTGTGAGAAAGTCTAATCACGAACTATGTCTAGGATTAAGTG 44 20323684 0.961961574 17 41 255 0.944444444 1.707570176 0.351851852 0.181818182 0.333333333 44 3 0 51 3R:20323579-20323726 7 CG42668 FBtr0302667|FBtr0302670|FBtr0302668|FBtr0306634|FBtr0302669|FBtr0303586|FBtr0302673|FBtr0306633 20323448|20323448|20323448|20323448|20323448|20323448|20323448|20323448 20324196|20324196|20324196|20324196|20324196|20324196|20324196|20324196 GTTGTGA 7mer-A1 dme-miR-307a-3p 3R + 20323613 20323726 3'utr CG42668 FlyBase G33342.2 TGGTCCTACTCAAATGCCTTCGCACGCTGCCAGATATATAAGCCCGACCGAGGCGCGTGGCCAGAACATCCGTTGTGAGAAAGTCTAATCACGAACTATGTCTAGGATTAAGTG 29 20323686 0.886643324 9 21 109 0.872727273 1.079181246 0.327272727 0.620689655 0.8 29 4 3 48 3R:20323613-20323726 7 8 3980 FBgn0261550 4720.296667 135.9533333 209.03 0.001694809 0.058843721 0.038272018 0 -2 -1 0.01 dme-miR-7-5p 6mer2-7 TCTTCC 3R 20323789 20323794 + 3R_20323789_20323794_+ 1 1 1 0 CG42668 FBtr0306634|FBtr0302668|FBtr0302670|FBtr0302667|FBtr0306633|FBtr0302673|FBtr0303586|FBtr0302669 20323448|20323448|20323448|20323448|20323448|20323448|20323448|20323448 20324196|20324196|20324196|20324196|20324196|20324196|20324196|20324196 3R + 20323729 20323967 3'utr CG42668 FlyBase G44127.1 TGTCTTATGTAAGTCCCAGCAATCCAAGTCTCTCCCGCAGACAAAGTCCATATGCAAATCTCTTCCCTTTTAGCCTTGGGCATTCCTTTCTCAAGATAAAACGTCTGGGTAGGTTAGTTTGTCGGAGATATACATTTATATCAAAATATACACATACGTACGAGTAGATGCACCAGATTTCGTAAAAATTCCAATTTAAACGATGCTACTACAAAGCTAGTTCGCTTTTCCTTTCCTTC 79 20323791 0.97730956 27 73 589 0.961165049 1.694605199 0.097087379 0.215189873 0.398058252 79 3 1 99 3R:20323729-20323967 6 CG42668 FBtr0302667|FBtr0302670|FBtr0302668|FBtr0306634|FBtr0302669|FBtr0303586|FBtr0302673|FBtr0306633 20323448|20323448|20323448|20323448|20323448|20323448|20323448|20323448 20324196|20324196|20324196|20324196|20324196|20324196|20324196|20324196 TCTTCC 6mer2-7 dme-miR-7-5p 3R + 20323751 20323813 3'utr CG42668 FlyBase G33343.1 TCCAAGTCTCTCCCGCAGACAAAGTCCATATGCAAATCTCTTCCCTTTTAGCCTTGGGCATTC 38 20323791 0.746749488 7 38 259 1 1.770852012 0.050847458 0.394736842 0.610169492 38 0 0 59 3R:20323751-20323813 6 36 3981 FBgn0261550 4720.296667 135.9533333 209.03 0.007626639 0.264796744 0.172224083 -2 -2 -2 0.01 dme-miR-282-5p 7mer-m8 AGAGGCT 3R 20324027 20324033 + 3R_20324027_20324033_+ 0.631524569 0.631524569 0.631524569 0 CG42668 FBtr0306634|FBtr0302668|FBtr0302670|FBtr0302667|FBtr0306633|FBtr0302673|FBtr0303586|FBtr0302669 20323448|20323448|20323448|20323448|20323448|20323448|20323448|20323448 20324196|20324196|20324196|20324196|20324196|20324196|20324196|20324196 3R + 20323975 20324200 3'utr CG42668 FlyBase G44127.2 AGTTAATATTAAATGACACGATTTAGGATGAACGACGAACGAACAATGCTCGAGAGGCTCTGCCCCATAAAGCACCACTTATACACAGTGCAACATACCTTAGAGATTTAATGCGAGAAGTGCTTATAGTAATTACTTTTAGTGTCTCTTATACACGAATTGTTTTTCCTCTTCCCAATACCTGCATACTTAGAATTTAATAAACTCTCCCCATTTCAAATCAAAA 133 20324035 0.977300125 32 120 682 0.925925926 1.698970004 0.148148148 0.180451128 0.327160494 133 10 2 150 3R:20323975-20324200 7 CG42668 FBtr0302667|FBtr0302670|FBtr0302668|FBtr0306634|FBtr0302669|FBtr0303586|FBtr0302673|FBtr0306633 20323448|20323448|20323448|20323448|20323448|20323448|20323448|20323448 20324196|20324196|20324196|20324196|20324196|20324196|20324196|20324196 AGAGGCT 7mer-m8 dme-miR-282-5p 3R + 20323992 20324200 3'utr CG42668 FlyBase G33346.1 ACGATTTAGGATGAACGACGAACGAACAATGCTCGAGAGGCTCTGCCCCATAAAGCACCACTTATACACAGTGCAACATACCTTAGAGATTTAATGCGAGAAGTGCTTATAGTAATTACTTTTAGTGTCTCTTATACACGAATTGTTTTTCCTCTTCCCAATACCTGCATACTTAGAATTTAATAAACTCTCCCCATTTCAAATCAAAA 90 20324035 0.83925902 25 82 471 0.92481203 1.390935107 0.090225564 0.388888889 0.586466165 90 6 4 123 3R:20323992-20324200 7 53.5 3982 FBgn0261550 4720.296667 135.9533333 209.03 0.011334033 0.393517383 0.255944123 -8 -8 -8 0.01 dme-miR-1012-3p 6mer2-7 TGACTA 3R 20324576 20324581 - 3R_20324576_20324581_- 1 0.99989884 0.99994942 7.16E-05 CG4360 FBtr0083899|FBtr0113252 20324272|20324272 20325628|20326217 3R - 20324562 20324616 3'utr CG4360 FlyBase G52772.2 TCTTAGCGCATACTTAGCAGCATCTTCTACTCAAATGACTACGCGCGGAGCAATG 27 20324592 0.717314952 6 25 163 0.96875 1.491361694 0.0625 0.185185185 0.3125 27 1 0 31 3R:20324562-20324616 6 CG4360 FBtr0083899|FBtr0113252 20324272|20324272 20325628|20326217 TGACTA 6mer2-7 dme-miR-1012-3p 3R - 20324537 20324624 3'utr CG4360 FlyBase G39825.1 AAGTGTACTCTTAGCGCATACTTAGCAGCATCTTCTACTCAAATGACTACGCGCGGAGCAATGGCGATCGCATAAATAATCAATAATA 24 20324592 0.974888426 9 22 132 0.846153846 1.51851394 0.102564103 0.375 0.615384615 24 6 0 33 3R:20324537-20324624 6 19.5 3983 FBgn0038787 2517.203333 86.49333333 132.24 0.007746692 0.225450902 0.147459165 11 11 11 0.01 dme-miR-1012-3p 6mer2-7 TGACTA 3R 20325113 20325118 - 3R_20325113_20325118_- 1 1 1 0 CG4360 FBtr0083899|FBtr0113252 20324272|20324272 20325628|20326217 3R - 20325067 20325192 3'utr CG4360 FlyBase G52775.1 GCTTTTCAAAGCTTTGTAAATGAATCATCGGCGTCTTTTTAAGTTTGGTTGCTGTTTTCGAATGGCAAGGAAAATGACTACAATAAATTTAGATGTGACCTACTTTGCACAATAACCTTTTATGCC 16 20325118 0.985350791 11 15 129 0.944444444 1.230448921 0.222222222 0.0625 0.166666667 16 1 0 17 3R:20325067-20325192 6 CG4360 FBtr0083899|FBtr0113252 20324272|20324272 20325628|20326217 TGACTA 6mer2-7 dme-miR-1012-3p 3R - 20325094 20325151 3'utr CG4360 FlyBase G39828.1 AGTTTGGTTGCTGTTTTCGAATGGCAAGGAAAATGACTACAATAAATTTAGATGTGAC 6 20325130 0.869581263 5 6 42 1 0.903089987 0.5 0.333333333 0.5 6 0 0 8 3R:20325094-20325151 6 4 3984 FBgn0038787 2517.203333 86.49333333 132.24 0.001589065 0.046246339 0.030248034 0 12 6 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 3R 20325438 20325443 - 3R_20325438_20325443_- 1 1 1 0 CG4360 FBtr0083899|FBtr0113252 20324272|20324272 20325628|20326217 3R - 20325408 20325465 3'utr CG4360 FlyBase G52777.1 ATATATACTCGAAAGTGTTATTTACCTGCTGTGCAGAGCGCAATTGTATGTAACTATA 54 20325445 0.975460906 7 52 445 0.984126984 1.792391689 0.253968254 0.148148148 0.26984127 54 1 0 62 3R:20325408-20325465 6 CG4360 FBtr0083899|FBtr0113252 20324272|20324272 20325628|20326217 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 3R - 20325304 20325580 3'utr CG4360 FlyBase G39829.1 AGCCAGCCAGTCAAGCAGCCATTGAGGAATAGTGCAATATGCATGCCACATAGCACATACACTTATAGATCGCATATACGGCATACGAATACGATTACATGAATACTATATTTGAATATATACTCGAAAGTGTTATTTACCTGCTGTGCAGAGCGCAATTGTATGTAACTATATCGTAGAGAGCTGATCCACATGCGTGTCCAATTGTAAATTAAGGCTAGCCGTGTTGGCATAAGCCACAGATGATATGATACAGGGTGTTTAGGCCTAAACTCTA 96 20325445 0.980148801 29 92 635 0.95890411 1.669006781 0.226027397 0.427083333 0.623287671 96 4 2 140 3R:20325304-20325580 6 49 3985 FBgn0038787 2517.203333 86.49333333 132.24 0.019466048 0.566517651 0.370538415 2 2 2 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT 3R 20325694 20325699 - 3R_20325694_20325699_- 1 1 1 0 CG4360 FBtr0113252 20324272 20326217 3R - 20325674 20325719 3'utr CG4360 FlyBase G52779.1 CGGTGAAAAGCCCTACAACTGTTCCTTTTGTCCTAAACAGTTCCGG 15 20325699 0.979081807 6 13 126 0.882352941 0.698970004 0 0.133333333 0.235294118 15 0 2 15 3R:20325674-20325719 6 CG4360 FBtr0113252 20324272 20326217 GTTCCT 6mer2-7 dme-miR-276a-3p 3R - 20325673 20325711 3'utr CG4360 FlyBase G39830.1 AGCCCTACAACTGTTCCTTTTGTCCTAAACAGTTCCGGC 6 20325695 0.984407809 4 5 43 0.888888889 0.903089987 0 0.5 0.666666667 6 1 0 8 3R:20325673-20325711 6 10.5 3986 FBgn0038787 2517.203333 86.49333333 132.24 0.004171296 0.121396639 0.079401089 0 -4 -2 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 20325771 20325776 - 3R_20325771_20325776_- 0.755363009 0.755363009 0.755363009 0 CG4360 FBtr0113252|FBtr0113252|FBtr0113252 20324272|20324272|20324272 20326217|20326217|20326217 3R - 20325742 20325795 3'utr CG4360 FlyBase G52780.1 AGCCCTACAAGTGCAAGATCTGTGAGGTCAACTTCCGGCAGGTGGCCACGCTGA 12 20325777 0.912384647 6 12 62 1 1.146128036 0 0.166666667 0.285714286 12 0 0 14 3R:20325742-20325795 6 CG4360 FBtr0113252|FBtr0113252|FBtr0113252 20324272|20324272|20324272 20326217|20326217|20326217 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 20325748 20325795 3'utr CG4360 FlyBase G39831.1 AGCCCTACAAGTGCAAGATCTGTGAGGTCAACTTCCGGCAGGTGGCCA 8 20325777 0.910315001 3 8 41 1 1.113943352 0.307692308 0.375 0.615384615 8 0 0 13 3R:20325748-20325795 6 10 3987 FBgn0038787 2517.203333 86.49333333 132.24 0.003972663 0.115615847 0.075620085 1 1 1 0.01 dme-miR-932-5p 6mer2-7 GAATTG 3R 20536017 20536022 - 3R_20536017_20536022_- 1 1 1 0 Stat92E FBtr0334584|FBtr0089486|FBtr0089485|FBtr0089487|FBtr0100457|FBtr0334582|FBtr0334586|FBtr0334581|FBtr0334583|FBtr0089484 20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535321|20535691|20535691 20537408|20537408|20537408|20537408|20537408|20538528|20537408|20537408|20537408|20537408 3R - 20535953 20536115 3'utr Stat92E FlyBase G52795.1 AAGCCTATGTTAAACGAAAGTGGAAAAACAATCAACGAGAGCAGCAACGCAGGGATTGATTGCTTTAATTTTAGTTATAATCTAAGTAAGATTGAATTGCTTTATGTAACCCCATCCTTTATTGGCTTCCAATGCTGAAAATGCGCAAAAATTTGAACTAATC 60 20536020 0.999984639 18 58 474 0.97260274 1.550228353 0.232876712 0.166666667 0.315068493 60 1 1 71 3R:20535953-20536115 6 Stat92E FBtr0100457|FBtr0089487|FBtr0334581|FBtr0089485|FBtr0334584|FBtr0089486|FBtr0089484|FBtr0334583|FBtr0334586|FBtr0334582 20535691|20535691|20535321|20535691|20535691|20535691|20535691|20535691|20535691|20535691 20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20538528 GAATTG 6mer2-7 dme-miR-932-5p 3R - 20535934 20536066 3'utr Stat92E FlyBase G39846.1 CAGGGATTGATTGCTTTAATTTTAGTTATAATCTAAGTAAGATTGAATTGCTTTATGTAACCCCATCCTTTATTGGCTTCCAATGCTGAAAATGCGCAAAAATTTGAACTAATCAATGTATATTTTTTTGAAA 44 20536020 0.986791595 20 42 366 0.966101695 1.45484486 0.084745763 0.272727273 0.457627119 44 1 1 57 3R:20535934-20536066 6 28.5 3988 FBgn0016917 6780.14 209.8333333 320.8166667 0.004203453 0.135822081 0.088835784 -2 -2 -2 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 20536257 20536262 - 3R_20536257_20536262_- 1 1 1 0 Stat92E FBtr0334584|FBtr0334584|FBtr0334584|FBtr0089486|FBtr0089486|FBtr0089486|FBtr0089485|FBtr0089485|FBtr0089485|FBtr0089487|FBtr0089487|FBtr0089487|FBtr0100457|FBtr0100457|FBtr0100457|FBtr0334582|FBtr0334582|FBtr0334582|FBtr0334586|FBtr0334586|FBtr0334586|FBtr0334581|FBtr0334581|FBtr0334581|FBtr0334583|FBtr0334583|FBtr0334583|FBtr0089484|FBtr0089484|FBtr0089484 20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535321|20535321|20535321|20535691|20535691|20535691|20535691|20535691|20535691 20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20538528|20538528|20538528|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408 3R - 20536129 20536314 3'utr Stat92E FlyBase G52796.1 CTTTTATATATGTATACATATGATTTCAATTTGTGCACTATGACGTGTTCGTCTGTGACAAAGCATTACGTTTAGATGATACTGACAAAATAATCGGTTTAGTTAGTGAGTAACTATTTGTTGAATCTAAATTTTTGATTTTGATTTTAATTTTATGGCCTAATTTTAAAACTTTGATATACAATT 276 20536263 0.855399416 35 263 2215 0.953216374 2.212187604 0.266081871 0.202898551 0.356725146 276 15 1 326 3R:20536129-20536314 6 Stat92E FBtr0100457|FBtr0100457|FBtr0100457|FBtr0089487|FBtr0089487|FBtr0089487|FBtr0334581|FBtr0334581|FBtr0334581|FBtr0089485|FBtr0089485|FBtr0089485|FBtr0334584|FBtr0334584|FBtr0334584|FBtr0089486|FBtr0089486|FBtr0089486|FBtr0089484|FBtr0089484|FBtr0089484|FBtr0334583|FBtr0334583|FBtr0334583|FBtr0334586|FBtr0334586|FBtr0334586|FBtr0334582|FBtr0334582|FBtr0334582 20535691|20535691|20535691|20535691|20535691|20535691|20535321|20535321|20535321|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691 20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20538528|20538528|20538528 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 20536200 20536313 3'utr Stat92E FlyBase G39849.1 TTTTATATATGTATACATATGATTTCAATTTGTGCACTATGACGTGTTCGTCTGTGACAAAGCATTACGTTTAGATGATACTGACAAAATAATCGGTTTAGTTAGTGAGTAACT 150 20536263 0.812100701 24 142 1134 0.935779817 1.832508913 0.23853211 0.36 0.559633028 150 12 2 204 3R:20536200-20536313 6 127.5 3989 FBgn0016917 6780.14 209.8333333 320.8166667 0.018804921 0.607625099 0.397423243 1 1 1 0.01 dme-miR-190-5p 6mer3-8 ACATAT 3R 20536294 20536299 - 3R_20536294_20536299_- 1 0.999999999 1 0 Stat92E FBtr0334584|FBtr0089486|FBtr0089485|FBtr0089487|FBtr0100457|FBtr0334582|FBtr0334586|FBtr0334581|FBtr0334583|FBtr0089484 20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535321|20535691|20535691 20537408|20537408|20537408|20537408|20537408|20538528|20537408|20537408|20537408|20537408 3R - 20536129 20536314 3'utr Stat92E FlyBase G52796.1 CTTTTATATATGTATACATATGATTTCAATTTGTGCACTATGACGTGTTCGTCTGTGACAAAGCATTACGTTTAGATGATACTGACAAAATAATCGGTTTAGTTAGTGAGTAACTATTTGTTGAATCTAAATTTTTGATTTTGATTTTAATTTTATGGCCTAATTTTAAAACTTTGATATACAATT 276 20536294 0.855399416 35 263 2215 0.953216374 2.212187604 0.266081871 0.202898551 0.356725146 276 15 1 326 3R:20536129-20536314 6 Stat92E FBtr0100457|FBtr0089487|FBtr0334581|FBtr0089485|FBtr0334584|FBtr0089486|FBtr0089484|FBtr0334583|FBtr0334586|FBtr0334582 20535691|20535691|20535321|20535691|20535691|20535691|20535691|20535691|20535691|20535691 20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20538528 ACATAT 6mer3-8 dme-miR-190-5p 3R - 20536200 20536313 3'utr Stat92E FlyBase G39849.1 TTTTATATATGTATACATATGATTTCAATTTGTGCACTATGACGTGTTCGTCTGTGACAAAGCATTACGTTTAGATGATACTGACAAAATAATCGGTTTAGTTAGTGAGTAACT 150 20536294 0.812100701 24 142 1134 0.935779817 1.832508913 0.23853211 0.36 0.559633028 150 12 2 204 3R:20536200-20536313 6 58.5 3990 FBgn0016917 6780.14 209.8333333 320.8166667 0.00862814 0.278792693 0.182347135 -5 -5 -5 0.01 dme-miR-970-3p 6mer2-7 CTTATG 3R 20536388 20536393 - 3R_20536388_20536393_- 1 0.992224719 0.996112359 0.005497967 Stat92E FBtr0334584|FBtr0089486|FBtr0089485|FBtr0089487|FBtr0100457|FBtr0334582|FBtr0334586|FBtr0334581|FBtr0334583|FBtr0089484 20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535321|20535691|20535691 20537408|20537408|20537408|20537408|20537408|20538528|20537408|20537408|20537408|20537408 3R - 20536333 20536516 3'utr Stat92E FlyBase G52797.1 AACATCAACATCAATAAGATCTAGCCGATCAATGCATGCAAATTGAGCACCTCAACACAAACACCTTCAGCTCACAGCCAGAACATTGTCTATATAATATATCGTGATTATGATTGTGTCTGACTTATGCAAAATTTAGAATTTCTGTGTTGTATAAACCTTTGGAATGTGTCCGCACGTTGTT 128 20536407 0.84850031 40 123 1037 0.95 2.181843588 0.13125 0.1796875 0.34375 128 8 0 152 3R:20536333-20536516 6 Stat92E FBtr0100457|FBtr0089487|FBtr0334581|FBtr0089485|FBtr0334584|FBtr0089486|FBtr0089484|FBtr0334583|FBtr0334586|FBtr0334582 20535691|20535691|20535321|20535691|20535691|20535691|20535691|20535691|20535691|20535691 20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20538528 CTTATG 6mer2-7 dme-miR-970-3p 3R - 20536335 20536501 3'utr Stat92E FlyBase G39850.1 AAGATCTAGCCGATCAATGCATGCAAATTGAGCACCTCAACACAAACACCTTCAGCTCACAGCCAGAACATTGTCTATATAATATATCGTGATTATGATTGTGTCTGACTTATGCAAAATTTAGAATTTCTGTGTTGTATAAACCTTTGGAATGTGTCCGCACGTTG 78 20536405 0.987633102 28 76 679 0.966386555 2.06069784 0.243697479 0.384615385 0.596638655 78 4 0 115 3R:20536335-20536501 6 29.5 3991 FBgn0016917 6780.14 209.8333333 320.8166667 0.004350943 0.140587768 0.091952829 14 12 13 0.01 dme-miR-184-3p 7mer-m8 TCCGTCC 3R 20538315 20538321 - 3R_20538315_20538321_- 0.661615243 0.661615243 0.661615243 0 Stat92E FBtr0334585 20538134 20538528 3R - 20538301 20538333 3'utr Stat92E FlyBase G52799.1 TCATCCGATCGATCCGTCCTGACCATCATCTCC 6 20538313 0.730722845 4 5 28 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 3R:20538301-20538333 7 Stat92E FBtr0334585 20538134 20538528 TCCGTCC 7mer-m8 dme-miR-184-3p 3R - 20538305 20538336 3'utr Stat92E FlyBase G39853.1 CTCTCATCCGATCGATCCGTCCTGACCATCAT 5 20538314 0.916419868 3 5 26 1 0.903089987 0.125 0.4 0.625 5 0 0 8 3R:20538305-20538336 7 5 3992 FBgn0016917 6780.14 209.8333333 320.8166667 0.000737448 0.023828435 0.015585225 -8 -7 -7.5 0.01 dme-miR-932-5p 6mer3-8 GGAATT 3R 20572546 20572551 + 3R_20572546_20572551_+ 0.591720885 0.591720885 0.591720885 0 CG5191 FBtr0345213|FBtr0083907|FBtr0083904|FBtr0083906|FBtr0083905|FBtr0083908 20572462|20572462|20572462|20572462|20572462|20572462 20573000|20573000|20573000|20573000|20573000|20573000 3R + 20572478 20572587 3'utr CG5191 FlyBase G44141.1 ATATCCTGTGCGTGATTCATTTGTACTTTGTTTTGTTATTAGCTAATTGTACACTGTCGAGCAGTTAGGGAATTTCAGAGAGACTTTAAATGGATTTAGACAAATCACTG 40 20572566 0.984480538 14 38 307 0.963636364 1.72427587 0.109090909 0.3 0.490909091 40 2 0 53 3R:20572478-20572587 6 CG5191 FBtr0083905|FBtr0083908|FBtr0083904|FBtr0083906|FBtr0345213|FBtr0083907 20572462|20572462|20572462|20572462|20572462|20572462 20573000|20573000|20573000|20573000|20573000|20573000 GGAATT 6mer3-8 dme-miR-932-5p 3R + 20572516 20572582 3'utr CG5191 FlyBase G33358.1 TTAGCTAATTGTACACTGTCGAGCAGTTAGGGAATTTCAGAGAGACTTTAAATGGATTTAGACAAAT 19 20572566 0.762361179 9 18 129 0.866666667 1.414973348 0.366666667 0.421052632 0.633333333 19 4 0 26 3R:20572516-20572582 6 15.5 3993 FBgn0038803 157 7.076666667 10.67333333 0.098726115 2.19029675 1.452217364 -20 -20 -20 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 20572687 20572692 + 3R_20572687_20572692_+ 1 1 1 0 CG5191 FBtr0345213|FBtr0083907|FBtr0083904|FBtr0083906|FBtr0083905|FBtr0083908 20572462|20572462|20572462|20572462|20572462|20572462 20573000|20573000|20573000|20573000|20573000|20573000 3R + 20572618 20572714 3'utr CG5191 FlyBase G44142.1 AGGAAAGGAATCCCTAGATCAGCCTCCATACTTTATCAGCATTTTATTCGACCATTACACCATCACACCACCAAATGTTCGTTCGGGACCTTCGAAA 100 20572693 0.967073056 11 100 543 1 2.079181246 0.175 0.18 0.316666667 100 0 0 120 3R:20572618-20572714 6 CG5191 FBtr0083905|FBtr0083908|FBtr0083904|FBtr0083906|FBtr0345213|FBtr0083907 20572462|20572462|20572462|20572462|20572462|20572462 20573000|20573000|20573000|20573000|20573000|20573000 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 20572602 20572761 3'utr CG5191 FlyBase G33359.1 TGGCTGAATGGTAGAAAGGAAAGGAATCCCTAGATCAGCCTCCATACTTTATCAGCATTTTATTCGACCATTACACCATCACACCACCAAATGTTCGTTCGGGACCTTCGAAATTAGTAATCCCTCAATCGCGAGTCATTACCACCCATTGTATTAAATT 61 20572693 0.973635749 14 61 370 1 1.973127854 0.191489362 0.393442623 0.606382979 61 0 0 94 3R:20572602-20572761 6 70.5 3994 FBgn0038803 157 7.076666667 10.67333333 0.449044586 9.962317475 6.605246721 -6 -6 -6 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 20572792 20572797 + 3R_20572792_20572797_+ 0.967274055 1 0.983637028 0.023140706 CG5191 FBtr0345213|FBtr0083907|FBtr0083904|FBtr0083906|FBtr0083905|FBtr0083908 20572462|20572462|20572462|20572462|20572462|20572462 20573000|20573000|20573000|20573000|20573000|20573000 3R + 20572791 20572836 3'utr CG5191 FlyBase G44144.1 GAGCTGTACATCGTATTCGTATTCGTAATCGTATTATCTTTACCTA 6 20572806 0.968920589 5 6 56 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3R:20572791-20572836 6 CG5191 FBtr0083905|FBtr0083908|FBtr0083904|FBtr0083906|FBtr0345213|FBtr0083907 20572462|20572462|20572462|20572462|20572462|20572462 20573000|20573000|20573000|20573000|20573000|20573000 AGCTGT 6mer3-8 dme-miR-1008-3p 3R + 20572790 20572837 3'utr CG5191 FlyBase G33360.1 TGAGCTGTACATCGTATTCGTATTCGTAATCGTATTATCTTTACCTAT 6 20572806 0.993222152 4 5 64 0.888888889 0.903089987 0 0.5 0.666666667 6 1 0 8 3R:20572790-20572837 6 3 3995 FBgn0038803 157 7.076666667 10.67333333 0.01910828 0.423928403 0.281074329 -14 -14 -14 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 20581843 20581849 - 3R_20581843_20581849_- 0.801970437 0.801970437 0.801970437 0 CG16953 FBtr0300803|FBtr0300803|FBtr0300803 20581768|20581768|20581768 20582499|20582499|20582499 3R - 20581815 20581885 3'utr CG16953 FlyBase G52839.1 CATCACACACTTAACACGCGCGACACAAATATTCATTGTGATAGAAATAGAACAAACAGTATGTACGTTTA 98 20581850 0.684349813 9 86 609 0.868421053 1.393575203 0.289473684 0.12244898 0.245614035 98 12 3 99 3R:20581815-20581885 7 CG16953 FBtr0300803|FBtr0300803|FBtr0300803 20581768|20581768|20581768 20582499|20582499|20582499 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 20581779 20581877 3'utr CG16953 FlyBase G39887.1 ACTTAACACGCGCGACACAAATATTCATTGTGATAGAAATAGAACAAACAGTATGTACGTTTACTAAAACGAAAAGTTTGAAGAAAACCCGTATACTTA 47 20581850 0.801804783 10 44 305 0.953846154 1.315270435 0.184615385 0.319148936 0.507692308 47 1 2 62 3R:20581779-20581877 7 67 3996 FBgn0038809 1215.62 52.09333333 79.63 0.055115908 1.286153059 0.841391435 1 1 1 0.01 dme-miR-317-5p 7mer-m8 GTATCCC 3R 20581922 20581928 - 3R_20581922_20581928_- 0.705949576 0.705949571 0.705949573 0 CG16953 FBtr0300803 20581768 20582499 3R - 20581898 20581994 3'utr CG16953 FlyBase G52840.1 AACTTATGCATGGCGACTTGCTCGTCGTGAGGAGTTACATAGATGCTAGCATAAGTCAATTGGATTGTATCCCTTGTATCGTGATCGAATTCTCTGA 26 20581955 0.84348064 9 24 189 0.928571429 1.113943352 0.214285714 0.076923077 0.142857143 26 1 1 26 3R:20581898-20581994 7 CG16953 FBtr0300803 20581768 20582499 GTATCCC 7mer-m8 dme-miR-317-5p 3R - 20581887 20581986 3'utr CG16953 FlyBase G39888.1 CATGGCGACTTGCTCGTCGTGAGGAGTTACATAGATGCTAGCATAAGTCAATTGGATTGTATCCCTTGTATCGTGATCGAATTCTCTGACAAAGACAAGC 13 20581955 0.975155323 8 13 85 1 1.204119983 0.25 0.153846154 0.3125 13 0 0 16 3R:20581887-20581986 7 6.5 3997 FBgn0038809 1215.62 52.09333333 79.63 0.005347066 0.124776043 0.081627527 27 27 27 0.01 dme-miR-2535b-3p 6mer2-7 CGTGAG 3R 20581964 20581969 - 3R_20581964_20581969_- 0.999998276 1 0.999999138 1.20E-06 CG16953 FBtr0300803 20581768 20582499 3R - 20581898 20581994 3'utr CG16953 FlyBase G52840.1 AACTTATGCATGGCGACTTGCTCGTCGTGAGGAGTTACATAGATGCTAGCATAAGTCAATTGGATTGTATCCCTTGTATCGTGATCGAATTCTCTGA 26 20581955 0.84348064 9 24 189 0.928571429 1.113943352 0.214285714 0.076923077 0.142857143 26 1 1 26 3R:20581898-20581994 6 CG16953 FBtr0300803 20581768 20582499 CGTGAG 6mer2-7 dme-miR-2535b-3p 3R - 20581887 20581986 3'utr CG16953 FlyBase G39888.1 CATGGCGACTTGCTCGTCGTGAGGAGTTACATAGATGCTAGCATAAGTCAATTGGATTGTATCCCTTGTATCGTGATCGAATTCTCTGACAAAGACAAGC 13 20581955 0.975155323 8 13 85 1 1.204119983 0.25 0.153846154 0.3125 13 0 0 16 3R:20581887-20581986 6 8 3998 FBgn0038809 1215.62 52.09333333 79.63 0.006581004 0.153570514 0.100464649 -14 -14 -14 0.01 dme-miR-14-3p 7mer-m8 AAGACTG 3R 20582041 20582047 - 3R_20582041_20582047_- 0.671795832 0.671795771 0.671795801 0 CG16953 FBtr0300803 20581768 20582499 3R - 20582004 20582158 3'utr CG16953 FlyBase G52841.1 ACGCACACACTTGCTCATCGATGGCCAAAATGTGGAGTAACAAGCATCCATTGGACCGCAATCAGTTCCAGGATTTGGGAACGCAACTGCAGATCCCTTTGGATATTGATAAAGACTGTCTTTGTTCTAAAAGCAAAAGTAAATCTGGTTAAAAA 84 20582050 0.905696364 22 80 529 0.958762887 1.968482949 0.092783505 0.119047619 0.237113402 84 4 0 93 3R:20582004-20582158 7 CG16953 FBtr0300803 20581768 20582499 AAGACTG 7mer-m8 dme-miR-14-3p 3R - 20582025 20582096 3'utr CG16953 FlyBase G39889.1 CAGTTCCAGGATTTGGGAACGCAACTGCAGATCCCTTTGGATATTGATAAAGACTGTCTTTGTTCTAAAAGC 27 20582050 0.908371874 10 24 224 0.928571429 1.290034611 0.238095238 0.333333333 0.571428571 27 2 1 39 3R:20582025-20582096 7 25 3999 FBgn0038809 1215.62 52.09333333 79.63 0.020565637 0.479907858 0.313952028 3 3 3 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 3R 20582201 20582206 - 3R_20582201_20582206_- 0.999999437 0.999999527 0.999999482 7.07E-08 CG16953 FBtr0300803|FBtr0300803 20581768|20581768 20582499|20582499 3R - 20582159 20582228 3'utr CG16953 FlyBase G52842.1 GAATCTTTTTTACGTTTCCAAATACTTATCGTCCCCTACGTTACCATTGTAATCATCTCCTTTGAACATT 10 20582202 0.989512395 7 7 80 0.714285714 1 0.142857143 0.2 0.428571429 10 4 0 10 3R:20582159-20582228 6 CG16953 FBtr0300803|FBtr0300803 20581768|20581768 20582499|20582499 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 3R - 20582172 20582238 3'utr CG16953 FlyBase G39891.1 AGAGATGATAGAATCTTTTTTACGTTTCCAAATACTTATCGTCCCCTACGTTACCATTGTAATCATC 10 20582202 0.985316298 8 9 71 0.882352941 1.176091259 0.176470588 0.5 0.705882353 10 2 0 15 3R:20582172-20582238 6 4.5 4000 FBgn0038809 1215.62 52.09333333 79.63 0.003701815 0.086383414 0.056511365 -4 -4 -4 0.01 dme-miR-8-3p 6mer2-7 AGTATT 3R 20586141 20586146 - 3R_20586141_20586146_- 1 1 1 0 2-Sep FBtr0334579|FBtr0083945 20586127|20586127 20586345|20586345 3R - 20586131 20586210 3'utr 2-Sep FlyBase G52853.1 TACACGCATATGTACGCAGGCATATAATGATTATGTATTTACAACTAACGAATAAATCGAACTTAGTATTTTAACAAAGT 19 20586140 0.757763503 10 19 129 1 1.397940009 0.04 0.315789474 0.48 19 0 0 25 3R:20586131-20586210 6 2-Sep FBtr0334579|FBtr0083945 20586127|20586127 20586345|20586345 AGTATT 6mer2-7 dme-miR-8-3p 3R - 20586135 20586170 3'utr 2-Sep FlyBase G39899.1 ACAACTAACGAATAAATCGAACTTAGTATTTTAACA 6 20586140 0.976731561 2 6 46 1 1 0.2 0.666666667 0.8 6 0 0 10 3R:20586135-20586170 6 8 4001 FBgn0014029 1104 83.25 126.7633333 0.007246377 0.096096096 0.063109732 -6 -6 -6 0.01 dme-miR-2535b-3p 7mer-A1 CGTGAGA 3R 20611137 20611143 + 3R_20611137_20611143_+ 0.782911824 0.782911824 0.782911824 0 bon FBtr0334639|FBtr0334637|FBtr0330043|FBtr0300617|FBtr0334638|FBtr0083912 20610835|20610835|20611057|20610835|20610835|20610835 20612540|20612540|20612540|20611624|20612540|20612540 3R + 20611104 20611154 3'utr bon FlyBase G44184.1 TGAGAAATCGATCCGTAGGCTTGCCCCCACAATCGTGAGACACACATACAT 11 20611139 0.938032697 3 11 42 1 1.176091259 0 0.272727273 0.466666667 11 0 0 15 3R:20611104-20611154 7 bon FBtr0334638|FBtr0083912|FBtr0330043|FBtr0300617|FBtr0334639|FBtr0334637 20610835|20610835|20611057|20610835|20610835|20610835 20612540|20612540|20612540|20611624|20612540|20612540 CGTGAGA 7mer-A1 dme-miR-2535b-3p 3R + 20611111 20611162 3'utr bon FlyBase G33384.1 TCGATCCGTAGGCTTGCCCCCACAATCGTGAGACACACATACATCTAAACAA 7 20611139 0.897487346 3 7 23 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 3R:20611111-20611162 7 7 4002 FBgn0023097 953.03 20.03333333 30.79333333 0.007344994 0.349417637 0.227321931 -2 -2 -2 0.01 dme-miR-932-5p 7mer-A1 GAATTGA 3R 20611312 20611318 + 3R_20611312_20611318_+ 0.823349562 0.823345225 0.823347394 3.11E-06 bon FBtr0334639|FBtr0334637|FBtr0330043|FBtr0300617|FBtr0334638|FBtr0083912 20610835|20610835|20611057|20610835|20610835|20610835 20612540|20612540|20612540|20611624|20612540|20612540 3R + 20611273 20611440 3'utr bon FlyBase G44185.1 ACGTACAATGGAATAAATTGAATCCCCTTGGGCGATCGAGAATTGAAATGAGATATGTTTAGCTAAATTTTAAGTGTTGAATATCCATAAACATTGATATAAATATAACTATAAATATGTATACCTTTCATTAGGGATCCACTAGAGATTAAAAATAGGTGTAAGTGT 30 20611315 0.978607654 15 29 205 0.96969697 1.505149978 0.181818182 0.1 0.181818182 30 1 0 32 3R:20611273-20611440 7 bon FBtr0334638|FBtr0083912|FBtr0330043|FBtr0300617|FBtr0334639|FBtr0334637 20610835|20610835|20611057|20610835|20610835|20610835 20612540|20612540|20612540|20611624|20612540|20612540 GAATTGA 7mer-A1 dme-miR-932-5p 3R + 20611273 20611338 3'utr bon FlyBase G33386.1 ACGTACAATGGAATAAATTGAATCCCCTTGGGCGATCGAGAATTGAAATGAGATATGTTTAGCTAA 18 20611315 0.972968995 7 18 108 1 1.431363764 0.185185185 0.388888889 0.592592593 18 0 0 27 3R:20611273-20611338 7 14.5 4003 FBgn0023097 953.03 20.03333333 30.79333333 0.015214631 0.723793677 0.470881143 -3 -3 -3 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 20611535 20611541 + 3R_20611535_20611541_+ 0.801970437 0.801970437 0.801970437 0 bon FBtr0334639|FBtr0334639|FBtr0334639|FBtr0334637|FBtr0334637|FBtr0334637|FBtr0330043|FBtr0330043|FBtr0330043|FBtr0300617|FBtr0300617|FBtr0300617|FBtr0334638|FBtr0334638|FBtr0334638|FBtr0083912|FBtr0083912|FBtr0083912 20610835|20610835|20610835|20610835|20610835|20610835|20611057|20611057|20611057|20610835|20610835|20610835|20610835|20610835|20610835|20610835|20610835|20610835 20612540|20612540|20612540|20612540|20612540|20612540|20612540|20612540|20612540|20611624|20611624|20611624|20612540|20612540|20612540|20612540|20612540|20612540 3R + 20611448 20611553 3'utr bon FlyBase G44186.1 CGAGTGAAATTGACATCCTTGTTTCACCGATTTGTGTTTGGGATGGAACCCGTTCTAACCAATCTTTGTTGGAATTGTATTTACTTTTGTGATAGCGAAAAACAAT 89 20611533 0.988943185 18 82 774 0.914529915 1.330413773 0.179487179 0.213483146 0.401709402 89 6 4 107 3R:20611448-20611553 7 bon FBtr0334638|FBtr0334638|FBtr0334638|FBtr0083912|FBtr0083912|FBtr0083912|FBtr0330043|FBtr0330043|FBtr0330043|FBtr0300617|FBtr0300617|FBtr0300617|FBtr0334639|FBtr0334639|FBtr0334639|FBtr0334637|FBtr0334637|FBtr0334637 20610835|20610835|20610835|20610835|20610835|20610835|20611057|20611057|20611057|20610835|20610835|20610835|20610835|20610835|20610835|20610835|20610835|20610835 20612540|20612540|20612540|20612540|20612540|20612540|20612540|20612540|20612540|20611624|20611624|20611624|20612540|20612540|20612540|20612540|20612540|20612540 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 20611514 20611577 3'utr bon FlyBase G33387.2 TGTTGGAATTGTATTTACTTTTGTGATAGCGAAAAACAATAAGATGAACAAATTACCGTTTATT 54 20611533 0.797691555 12 49 448 0.905405405 1.224014811 0.189189189 0.296296296 0.486486486 54 4 3 67 3R:20611514-20611577 7 49.5 4004 FBgn0023097 953.03 20.03333333 30.79333333 0.051939603 2.470881864 1.607490799 2 2 2 0.01 dme-miR-1012-3p 7mer-m8 TTGACTA 3R 20611659 20611665 + 3R_20611659_20611665_+ 0.631525999 0.631525999 0.631525999 0 bon FBtr0334639|FBtr0334637|FBtr0330043|FBtr0334638|FBtr0083912 20610835|20610835|20611057|20610835|20610835 20612540|20612540|20612540|20612540|20612540 3R + 20611600 20611735 3'utr bon FlyBase G44188.1 AAATTAAACAATGTGGCAAAGTTCTACCATCATTTCGAATTTGACATGTACGATATTTATTGACTATTGACCGCTAACCCCATCCATCGGTAGAATCTAATTAGGACGCTCATGTGCAGCTCCCTAAGCTCCTAAG 24 20611667 0.976847418 12 23 149 0.958333333 1.06069784 0.291666667 0 0 24 0 1 23 3R:20611600-20611735 7 bon FBtr0334638|FBtr0083912|FBtr0330043|FBtr0334639|FBtr0334637 20610835|20610835|20611057|20610835|20610835 20612540|20612540|20612540|20612540|20612540 TTGACTA 7mer-m8 dme-miR-1012-3p 3R + 20611651 20611728 3'utr bon FlyBase G33388.1 GATATTTATTGACTATTGACCGCTAACCCCATCCATCGGTAGAATCTAATTAGGACGCTCATGTGCAGCTCCCTAAGC 15 20611666 0.702053639 7 12 84 0.833333333 1.301029996 0.125 0.4 0.625 15 4 0 20 3R:20611651-20611728 7 5 4005 FBgn0023097 953.03 20.03333333 30.79333333 0.005246425 0.249584027 0.162372808 -8 -7 -7.5 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 3R 20611711 20611716 + 3R_20611711_20611716_+ 0.999996935 1 0.999998468 2.19E-06 bon FBtr0334639|FBtr0334637|FBtr0330043|FBtr0334638|FBtr0083912 20610835|20610835|20611057|20610835|20610835 20612540|20612540|20612540|20612540|20612540 3R + 20611600 20611735 3'utr bon FlyBase G44188.1 AAATTAAACAATGTGGCAAAGTTCTACCATCATTTCGAATTTGACATGTACGATATTTATTGACTATTGACCGCTAACCCCATCCATCGGTAGAATCTAATTAGGACGCTCATGTGCAGCTCCCTAAGCTCCTAAG 24 20611712 0.976847418 12 23 149 0.958333333 1.06069784 0.291666667 0 0 24 0 1 23 3R:20611600-20611735 6 bon FBtr0334638|FBtr0083912|FBtr0330043|FBtr0334639|FBtr0334637 20610835|20610835|20611057|20610835|20610835 20612540|20612540|20612540|20612540|20612540 ATGTGC 6mer3-8 dme-miR-305-3p 3R + 20611651 20611728 3'utr bon FlyBase G33388.1 GATATTTATTGACTATTGACCGCTAACCCCATCCATCGGTAGAATCTAATTAGGACGCTCATGTGCAGCTCCCTAAGC 15 20611711 0.702053639 7 12 84 0.833333333 1.301029996 0.125 0.4 0.625 15 4 0 20 3R:20611651-20611728 6 7.5 4006 FBgn0023097 953.03 20.03333333 30.79333333 0.007869637 0.37437604 0.243559212 -1 0 -0.5 0.01 dme-miR-79-3p 6mer2-7 AGCTTT 3R 20612000 20612005 + 3R_20612000_20612005_+ 1 1 1 0 bon FBtr0334639|FBtr0334637|FBtr0330043|FBtr0334638|FBtr0083912 20610835|20610835|20611057|20610835|20610835 20612540|20612540|20612540|20612540|20612540 3R + 20611987 20612018 3'utr bon FlyBase G44190.2 CCGACACAGAATCAGCTTTTCATATATATTTA 7 20611999 0.930856062 2 6 48 0.888888889 0.602059991 0 0.285714286 0.444444444 7 0 1 8 3R:20611987-20612018 6 bon FBtr0334638|FBtr0083912|FBtr0330043|FBtr0334639|FBtr0334637 20610835|20610835|20611057|20610835|20610835 20612540|20612540|20612540|20612540|20612540 AGCTTT 6mer2-7 dme-miR-79-3p 3R + 20611975 20612053 3'utr bon FlyBase G33391.1 ACATAAATATTTCCGACACAGAATCAGCTTTTCATATATATTTATATAAATATATATGTATGTATATCTTTAGCCGACC 7 20611998 0.976848981 4 7 59 1 1.146128036 0 0.571428571 0.785714286 7 0 0 14 3R:20611975-20612053 6 5 4007 FBgn0023097 953.03 20.03333333 30.79333333 0.005246425 0.249584027 0.162372808 1 2 1.5 0.01 dme-miR-968-5p 8mer-A1 ACTACTTA 3R 20612492 20612499 + 3R_20612492_20612499_+ 0.637907622 0.637869283 0.637888453 2.71E-05 bon FBtr0334639|FBtr0334637|FBtr0330043|FBtr0334638|FBtr0083912 20610835|20610835|20611057|20610835|20610835 20612540|20612540|20612540|20612540|20612540 3R + 20612455 20612514 3'utr bon FlyBase G44191.1 TTACGATAACTAAAGATTAACCACTGTATATGAATGTACTACTTACTATCGAGTGGATTA 110 20612489 0.987030846 7 109 960 0.992592593 1.826074803 0.096296296 0.190909091 0.340740741 110 0 1 134 3R:20612455-20612514 8 bon FBtr0334638|FBtr0083912|FBtr0330043|FBtr0334639|FBtr0334637 20610835|20610835|20611057|20610835|20610835 20612540|20612540|20612540|20612540|20612540 ACTACTTA 8mer-A1 dme-miR-968-5p 3R + 20612421 20612513 3'utr bon FlyBase G33393.1 ATGGAAATTATTTTATCTGTTTTAGCCGTAAGTTTTACGATAACTAAAGATTAACCACTGTATATGAATGTACTACTTACTATCGAGTGGATT 43 20612489 0.98762028 7 43 390 1 1.806179974 0.109375 0.372093023 0.578125 43 0 0 64 3R:20612421-20612513 8 74.5 4008 FBgn0023097 953.03 20.03333333 30.79333333 0.078171726 3.718801997 2.419354839 3 3 3 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 3R 20620566 20620571 + 3R_20620566_20620571_+ 0.846224181 0.863663818 0.854943999 0.012331659 CG5466 FBtr0083913 20620354 20621269 3R + 20620531 20620588 3'utr CG5466 FlyBase G44193.1 GTTCAACACAAGACTTGATTTCACATTTTCCACATTTGACTGACCTTTAGGCATACAT 24 20620565 0.807187818 7 24 202 1 1.431363764 0.037037037 0.125 0.222222222 24 0 0 27 3R:20620531-20620588 6 CG5466 FBtr0083913 20620354 20621269 TTGACT 6mer3-8 dme-miR-1012-3p 3R + 20620525 20620588 3'utr CG5466 FlyBase G33394.1 TGCCATGTTCAACACAAGACTTGATTTCACATTTTCCACATTTGACTGACCTTTAGGCATACAT 24 20620566 0.741562548 12 22 201 0.948717949 1.267171728 0 0.375 0.615384615 24 1 1 37 3R:20620525-20620588 6 17.5 4009 FBgn0038815 41.00333333 1.706666667 2.616666667 0.42679457 10.25390625 6.687898089 1 0 0.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 20620700 20620707 + 3R_20620700_20620707_+ 0.650171355 0.65017135 0.650171353 0 CG5466 FBtr0083913|FBtr0083913|FBtr0083913 20620354|20620354|20620354 20621269|20621269|20621269 3R + 20620673 20620724 3'utr CG5466 FlyBase G44194.1 AAATTAGTTAAACAATTGGCAAAACGTCTGTGATATTTGAATTATGTTGGCA 162 20620699 0.870506695 8 154 1270 0.955665025 1.685741739 0.463054187 0.228395062 0.384236453 162 6 3 194 3R:20620673-20620724 8 CG5466 FBtr0083913|FBtr0083913|FBtr0083913 20620354|20620354|20620354 20621269|20621269|20621269 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 20620669 20620719 3'utr CG5466 FlyBase G33395.1 CGGCAAATTAGTTAAACAATTGGCAAAACGTCTGTGATATTTGAATTATGT 114 20620699 0.849975028 9 107 857 0.943037975 1.474216264 0.525316456 0.289473684 0.487341772 114 5 4 149 3R:20620669-20620719 8 136 4010 FBgn0038815 41.00333333 1.706666667 2.616666667 3.316803512 79.6875 51.97452229 1 1 1 0.01 dme-miR-190-5p 7mer-A1 CATATCA 3R 20620856 20620862 + 3R_20620856_20620862_+ 0.782911824 0.782911824 0.782911824 0 CG5466 FBtr0083913 20620354 20621269 3R + 20620808 20620861 3'utr CG5466 FlyBase G44195.1 CTAAGCATATATTCTTAGCCGTTCTCGTGCAATCGACGACTTTTCGCCCATATC 13 20620850 0.979903722 5 13 90 1 1.230448921 0 0.153846154 0.352941176 13 0 0 17 3R:20620808-20620861 6 CG5466 FBtr0083913 20620354 20621269 CATATCA 7mer-A1 dme-miR-190-5p 3R + 20620822 20620862 3'utr CG5466 FlyBase G33396.1 TTAGCCGTTCTCGTGCAATCGACGACTTTTCGCCCATATCA 10 20620850 0.851397029 3 10 62 1 1.301029996 0 0.6 0.8 10 0 0 20 3R:20620822-20620862 7 10 4011 FBgn0038815 41.00333333 1.706666667 2.616666667 0.243882611 5.859375 3.821656051 6 6 6 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 3R 20626835 20626840 + 3R_20626835_20626840_+ 1 1 1 0 H FBtr0083914|FBtr0083916|FBtr0083917|FBtr0083915 20626787|20626787|20626787|20626787 20628915|20627251|20628915|20627251 3R + 20626817 20626897 3'utr H FlyBase G44216.1 TTCTGGGCCAACCATTCGAGTTAAGAACATTTTCGCACTAGTAGCGCTTAAGACGACATTCAATACACGTAATATAATTTG 31 20626848 0.982247062 10 28 193 0.942857143 1.51851394 0.085714286 0.129032258 0.228571429 31 2 0 33 3R:20626817-20626897 6 H FBtr0083916|FBtr0083914|FBtr0083915|FBtr0083917 20626787|20626787|20626787|20626787 20627251|20628915|20627251|20628915 AGTTAA 6mer3-8 dme-miR-999-3p 3R + 20626767 20626937 stop_codon H FlyBase G33408.1 ACTGAATCTGTCAAAGCACTGAGACATACACACGCCCCAGCTGCCCCAGTTTCTGGGCCAACCATTCGAGTTAAGAACATTTTCGCACTAGTAGCGCTTAAGACGACATTCAATACACGTAATATAATTTGATAAGTTCGCTGATAGTTTAGTTGTAACCCGATTGTTTAA 37 20626848 0.985208283 16 34 269 0.947368421 1.431363764 0.245614035 0.351351351 0.578947368 37 2 1 54 3R:20626767-20626937 6 12 4012 FBgn0001169 717.03 17.48666667 26.88666667 0.016735701 0.686237133 0.446317878 -13 -13 -13 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 3R 20627229 20627235 + 3R_20627229_20627235_+ 0.823349562 0.823349562 0.823349562 0 H FBtr0083914|FBtr0083916|FBtr0083917|FBtr0083915 20626787|20626787|20626787|20626787 20628915|20627251|20628915|20627251 3R + 20627212 20627251 3'utr H FlyBase G44217.1 AAACATTTCCTTGAAACAGACTGAACCTGAATTTTTTTAG 14 20627220 0.790730145 4 12 91 0.857142857 1.079181246 0.071428571 0 0 14 2 0 12 3R:20627212-20627251 7 H FBtr0083916|FBtr0083914|FBtr0083915|FBtr0083917 20626787|20626787|20626787|20626787 20627251|20628915|20627251|20628915 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 20627216 20627246 3'utr H FlyBase G33409.1 ATTTCCTTGAAACAGACTGAACCTGAATTTT 15 20627233 0.804078651 5 14 79 0.956521739 1.342422681 0.086956522 0.4 0.608695652 15 1 0 22 3R:20627216-20627246 7 14.5 4013 FBgn0001169 717.03 17.48666667 26.88666667 0.020222306 0.829203202 0.539300769 9 -4 2.5 0.01 dme-miR-305-5p 6mer2-7 GTACAA 3R 20627933 20627938 + 3R_20627933_20627938_+ 1 1 1 0 H FBtr0083914|FBtr0083917 20626787|20626787 20628915|20628915 3R + 20627921 20627964 3'utr H FlyBase G44219.1 AAACCGGAACTCGTACAACTGAAACTGATACAAATAAAAAACAT 32 20627940 0.865847874 3 32 120 1 1.579783597 0.026315789 0.15625 0.289473684 32 0 0 38 3R:20627921-20627964 6 H FBtr0083914|FBtr0083917 20626787|20626787 20628915|20628915 GTACAA 6mer2-7 dme-miR-305-5p 3R + 20627916 20627961 3'utr H FlyBase G33410.1 ATTTCAAACCGGAACTCGTACAACTGAAACTGATACAAATAAAAAA 13 20627941 0.952861705 4 11 49 0.866666667 1.113943352 0.066666667 0.153846154 0.266666667 13 2 0 13 3R:20627916-20627961 6 21.5 4014 FBgn0001169 717.03 17.48666667 26.88666667 0.029984798 1.229508197 0.799652864 -7 -8 -7.5 0.01 dme-miR-12-5p 6mer3-8 AATACT 3R 20628857 20628862 + 3R_20628857_20628862_+ 1 1 1 0 H FBtr0083914|FBtr0083917 20626787|20626787 20628915|20628915 3R + 20628837 20628880 3'utr H FlyBase G44223.1 AGGTATATATACTGCAACTGAATACTTGATGTCAATAAAAACTT 9 20628862 0.960188034 3 9 59 1 1.041392685 0.090909091 0.222222222 0.363636364 9 0 0 11 3R:20628837-20628880 6 H FBtr0083914|FBtr0083917 20626787|20626787 20628915|20628915 AATACT 6mer3-8 dme-miR-12-5p 3R + 20628837 20628879 3'utr H FlyBase G33412.1 AGGTATATATACTGCAACTGAATACTTGATGTCAATAAAAACT 10 20628862 0.733194985 2 8 64 0.75 0.954242509 0 0.2 0.333333333 10 3 0 9 3R:20628837-20628879 6 9 4015 FBgn0001169 717.03 17.48666667 26.88666667 0.012551776 0.51467785 0.334738408 -5 -5 -5 0.01 dme-miR-317-5p 6mer3-8 GTATCC 3R 20629292 20629297 - 3R_20629292_20629297_- 1 1 1 0 Pi3K92E FBtr0083941|FBtr0083940|FBtr0334643 20628970|20628970|20628970 20629746|20629746|20629746 3R - 20629260 20629359 3'utr Pi3K92E FlyBase G52869.1 ATTCATTTGTTGTTTGAACACCCCCCCGCACATGCACATTGGCGCATGAACGTGCAAAAATTGTATCCTATTATGCTATATTAATTTAAGAGACATTAAC 92 20629298 0.986139433 13 90 754 0.983193277 2.068185862 0.529411765 0.260869565 0.428571429 92 2 0 117 3R:20629260-20629359 6 Pi3K92E FBtr0334643|FBtr0083940|FBtr0083941 20628970|20628970|20628970 20629746|20629746|20629746 GTATCC 6mer3-8 dme-miR-317-5p 3R - 20629268 20629346 3'utr Pi3K92E FlyBase G39914.1 TTGAACACCCCCCCGCACATGCACATTGGCGCATGAACGTGCAAAAATTGTATCCTATTATGCTATATTAATTTAAGAG 41 20629298 0.988292215 9 36 333 0.878787879 1.286306739 0.424242424 0.414634146 0.636363636 41 6 2 58 3R:20629268-20629346 6 57.5 4016 FBgn0015279 1152.983333 31.04666667 47.44333333 0.049870625 1.852050676 1.211972177 1 1 1 0.01 dme-miR-970-3p 6mer3-8 TCTTAT 3R 20629400 20629405 - 3R_20629400_20629405_- 1 1 1 0 Pi3K92E FBtr0083941|FBtr0083940|FBtr0334643 20628970|20628970|20628970 20629746|20629746|20629746 3R - 20629364 20629413 3'utr Pi3K92E FlyBase G52870.1 CCGCCCCCTCTTATACAGTGATTTTTGATCCTAAAAATTGTTTTGTTGTC 7 20629400 0.990739511 4 7 74 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 3R:20629364-20629413 6 Pi3K92E FBtr0334643|FBtr0083940|FBtr0083941 20628970|20628970|20628970 20629746|20629746|20629746 TCTTAT 6mer3-8 dme-miR-970-3p 3R - 20629375 20629437 3'utr Pi3K92E FlyBase G39915.1 TTGTAACTGTAATCATTTATCGCCCCGCCCCCTCTTATACAGTGATTTTTGATCCTAAAAATT 9 20629390 0.983713444 6 8 69 1 1.041392685 0.272727273 0.222222222 0.363636364 9 0 0 11 3R:20629375-20629437 6 6 4017 FBgn0015279 1152.983333 31.04666667 47.44333333 0.005203891 0.193257462 0.126466662 -5 -15 -10 0.01 dme-miR-317-3p 8mer-A1 TGTGTTCA 3R 20629561 20629568 - 3R_20629561_20629568_- 0.631136783 0.631136783 0.631136783 0 Pi3K92E FBtr0083941|FBtr0083940|FBtr0334643 20628970|20628970|20628970 20629746|20629746|20629746 3R - 20629535 20629654 3'utr Pi3K92E FlyBase G52872.1 ACCAAGTCTAAGTTTCTGCCTGCCCTTCCGAGCCTCTGCAACAGGCGTAGTACAATTTTGTATCCAATTCATAAAGTTCAAAACTATGTGTTCACTATGTTAGGCCGAGAACTACCCAAT 80 20629568 0.981441057 13 76 546 0.956043956 1.638489257 0.098901099 0.1125 0.21978022 80 3 1 87 3R:20629535-20629654 8 Pi3K92E FBtr0334643|FBtr0083940|FBtr0083941 20628970|20628970|20628970 20629746|20629746|20629746 TGTGTTCA 8mer-A1 dme-miR-317-3p 3R - 20629532 20629585 3'utr Pi3K92E FlyBase G39917.1 CATAAAGTTCAAAACTATGTGTTCACTATGTTAGGCCGAGAACTACCCAATCGA 12 20629568 0.886071763 6 11 87 0.947368421 1.255272505 0.210526316 0.5 0.684210526 12 1 0 18 3R:20629532-20629585 8 11.5 4018 FBgn0015279 1152.983333 31.04666667 47.44333333 0.009974125 0.370410135 0.242394435 0 0 0 0.01 dme-bantam-3p 7mer-A1 GATCTCA 3R 20644139 20644145 + 3R_20644139_20644145_+ 0.823349562 0.823349562 0.823349562 0 Lrrk FBtr0334641|FBtr0334640|FBtr0112788 20644133|20644133|20644133 20644279|20644279|20644279 3R + 20644091 20644157 stop_codon Lrrk FlyBase G44228.1 ATCACATTCATTGCCTGCTGTGGCGCGCCAAGCACTGGACCTAAATTCGATCTCATTCAAAATATTT 52 20644136 0.698673896 10 50 359 0.966101695 1.755874856 0.084745763 0.115384615 0.220338983 52 2 0 57 3R:20644091-20644157 7 Lrrk FBtr0334641|FBtr0334640|FBtr0112788 20644133|20644133|20644133 20644279|20644279|20644279 GATCTCA 7mer-A1 dme-bantam-3p 3R + 20644093 20644170 stop_codon Lrrk FlyBase G33415.1 CACATTCATTGCCTGCTGTGGCGCGCCAAGCACTGGACCTAAATTCGATCTCATTCAAAATATTTGTTGACGTATTTA 45 20644136 0.981245242 7 44 317 0.984615385 1.806179974 0.015384615 0.355555556 0.553846154 45 1 0 64 3R:20644093-20644170 7 44.5 4019 FBgn0038816 197.3233333 3.033333333 4.62 0.225518185 14.67032967 9.632034632 3 3 3 0.01 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 20758586 20758593 - 3R_20758586_20758593_- 0.631136385 0.631136385 0.631136385 0 CG31195 FBtr0302188 20757267 20758623 3R - 20758559 20758621 3'utr CG31195 FlyBase G52896.2 ACCGCACGCCAAATAACTAACGCAAACTTCCGTCCAAACAAAACTCACATCAAATCTCTCCAC 3573 20758594 0.791587169 7 3525 11201 0.986995516 2.301227357 0.010762332 0.192835153 0.353363229 3573 37 21 4402 3R:20758559-20758621 8 CG31195 FBtr0302188 20757267 20758623 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R - 20758559 20758621 3'utr CG31195 FlyBase G39937.1 ACCGCACGCCAAATAACTAACGCAAACTTCCGTCCAAACAAAACTCACATCAAATCTCTCCAC 2319 20758594 0.786185181 10 2292 6947 0.992256637 2.776701184 0.008573009 0.385942216 0.60619469 2319 23 5 3588 3R:20758559-20758621 8 2907 4020 FBgn0051195 435.6633333 13.05 19.87666667 6.67258357 222.7586207 146.2518866 1 1 1 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 3R 20807095 20807100 + 3R_20807095_20807100_+ 1 1 1 0 Syp FBtr0083961|FBtr0334713|FBtr0083963|FBtr0083959 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 3R + 20807011 20807119 3'utr Syp FlyBase G44262.1 AGATACATATTTGAAAGCACATATAGACAGACAGACGAGATCAGGCTCAGAGGCGCGTTGAAAAGCAAAGCTTAGTGAGGAACATTGACTGACAAAGTAAAAAGTAAAC 88 20807095 0.725088587 12 80 316 0.927927928 1.234685974 0.261261261 0.193181818 0.36036036 88 3 5 103 3R:20807011-20807119 6 Syp FBtr0083963|FBtr0083959|FBtr0083961|FBtr0334713 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 TTGACT 6mer3-8 dme-miR-1012-3p 3R + 20807019 20807122 3'utr Syp FlyBase G33444.1 ATTTGAAAGCACATATAGACAGACAGACGAGATCAGGCTCAGAGGCGCGTTGAAAAGCAAAGCTTAGTGAGGAACATTGACTGACAAAGTAAAAAGTAAACAAA 63 20807095 0.945780817 10 58 239 0.926315789 1.166331422 0.105263158 0.365079365 0.578947368 63 2 5 88 3R:20807019-20807122 6 69.5 4021 FBgn0038826 3810.263333 58.4 89.27 0.018240209 1.190068493 0.778537023 0 0 0 0.01 dme-bantam-3p 7mer-A1 GATCTCA 3R 20807973 20807979 + 3R_20807973_20807979_+ 0.823349562 0.823349562 0.823349562 0 Syp FBtr0083961|FBtr0334713|FBtr0083963|FBtr0083959 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 3R + 20807925 20807993 3'utr Syp FlyBase G44267.1 TTGGTTGAAGACCGAAGAACCCTGTCGTTTACGTTTCCGCTATTGCTAGATCTCAAGTAAAGCAAAAAG 69 20807968 0.982791842 9 65 489 0.943181818 1.919078092 0.147727273 0.217391304 0.386363636 69 5 0 83 3R:20807925-20807993 7 Syp FBtr0083963|FBtr0083959|FBtr0083961|FBtr0334713 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 GATCTCA 7mer-A1 dme-bantam-3p 3R + 20807909 20807995 3'utr Syp FlyBase G33447.1 TCGACAACAAAATTGTTTGGTTGAAGACCGAAGAACCCTGTCGTTTACGTTTCCGCTATTGCTAGATCTCAAGTAAAGCAAAAAGTT 64 20807968 0.982620701 8 60 452 0.936842105 1.949390007 0.157894737 0.375 0.578947368 64 6 0 89 3R:20807909-20807995 7 64.5 4022 FBgn0038826 3810.263333 58.4 89.27 0.016927964 1.104452055 0.722527165 5 5 5 0.01 dme-miR-12-5p 6mer3-8 AATACT 3R 20808055 20808060 + 3R_20808055_20808060_+ 1 1 1 0 Syp FBtr0083961|FBtr0334713|FBtr0083963|FBtr0083959 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 3R + 20808046 20808089 3'utr Syp FlyBase G44268.1 TAACGAATGAATACTTCCAATTTTGAACTCAAGTATAAAGCAAA 25 20808068 0.707606846 4 24 186 1 1.505149978 0.03125 0.2 0.375 25 0 0 32 3R:20808046-20808089 6 Syp FBtr0083963|FBtr0083959|FBtr0083961|FBtr0334713 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 AATACT 6mer3-8 dme-miR-12-5p 3R + 20808049 20808103 3'utr Syp FlyBase G33448.1 CGAATGAATACTTCCAATTTTGAACTCAAGTATAAAGCAAAATACAAACTGTTGG 21 20808068 0.987051837 5 18 150 0.857142857 1.079181246 0.071428571 0.333333333 0.5 21 3 1 24 3R:20808049-20808103 6 20 4023 FBgn0038826 3810.263333 58.4 89.27 0.005248981 0.342465753 0.224039431 -13 -13 -13 0.01 dme-miR-92b-3p 7mer-m1 TGCAATT 3R 20808650 20808656 + 3R_20808650_20808656_+ 0.765586663 0.765586663 0.765586663 0 Syp FBtr0083961|FBtr0334713|FBtr0083963|FBtr0083959 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 3R + 20808622 20808674 3'utr Syp FlyBase G44270.1 TTTTTTGAGAGAGAGCATTTCACGCAACTGCAATTGATTGTTGCCTTCGAAAA 16 20808662 0.703037512 6 14 115 0.909090909 1.301029996 0.136363636 0.3125 0.5 16 2 0 20 3R:20808622-20808674 7 Syp FBtr0083963|FBtr0083959|FBtr0083961|FBtr0334713 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 TGCAATT 7mer-m1 dme-miR-92b-3p 3R + 20808619 20808673 3'utr Syp FlyBase G33450.1 TTTTTTTTTGAGAGAGAGCATTTCACGCAACTGCAATTGATTGTTGCCTTCGAAA 10 20808640 0.720883064 7 10 73 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 3R:20808619-20808673 7 11 4024 FBgn0038826 3810.263333 58.4 89.27 0.00288694 0.188356164 0.123221687 -12 10 -1 0.01 dme-miR-986-5p 6mer3-8 ATTCGA 3R 20808912 20808917 + 3R_20808912_20808917_+ 0.999162708 0.999998183 0.999580446 0.000590788 Syp FBtr0083961|FBtr0334713|FBtr0083963|FBtr0083959 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 3R + 20808899 20808942 3'utr Syp FlyBase G44272.1 AACGATTTGTTTAATTCGATAACTGTACTGATTTTATATTGTTT 26 20808931 0.747317201 10 26 243 1 1.531478917 0.058823529 0.230769231 0.411764706 26 0 0 34 3R:20808899-20808942 6 Syp FBtr0083963|FBtr0083959|FBtr0083961|FBtr0334713 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 ATTCGA 6mer3-8 dme-miR-986-5p 3R + 20808910 20808977 3'utr Syp FlyBase G33451.1 TAATTCGATAACTGTACTGATTTTATATTGTTTTAAATTTGTAATTTAATTTGTAAGTTTTTATTGTT 31 20808931 0.685853445 11 28 329 0.893617021 1.62324929 0 0.35483871 0.574468085 31 5 0 42 3R:20808910-20808977 6 25 4025 FBgn0038826 3810.263333 58.4 89.27 0.006561226 0.428082192 0.280049289 -19 -19 -19 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 20809721 20809726 + 3R_20809721_20809726_+ 0.997219982 0.997946191 0.997583086 0.000513501 Syp FBtr0083961|FBtr0334713|FBtr0083963|FBtr0083959 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 3R + 20809664 20809803 3'utr Syp FlyBase G44279.1 AATTGCAAACTGCGCATGGAAACTGAGCGAAAAAAATGAAAAACTTTACATGAATTGTGATGATGCAAAGGCAAGATTTAATCATAATTACTAAATCTATATATACAGTAAATATATATATCTTTCTCTATAAATATATA 110 20809718 0.979907498 14 105 744 0.966216216 1.854306042 0.398648649 0.254545455 0.445945946 110 4 1 143 3R:20809664-20809803 6 Syp FBtr0083963|FBtr0083959|FBtr0083961|FBtr0334713 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R + 20809651 20809754 3'utr Syp FlyBase G33455.1 AAGGTGGACAAAAAATTGCAAACTGCGCATGGAAACTGAGCGAAAAAAATGAAAAACTTTACATGAATTGTGATGATGCAAAGGCAAGATTTAATCATAATTAC 77 20809718 0.880452781 16 71 522 0.925233645 1.393575203 0.448598131 0.298701299 0.495327103 77 5 3 99 3R:20809651-20809754 6 82 4026 FBgn0038826 3810.263333 58.4 89.27 0.021520822 1.404109589 0.918561667 3 3 3 0.01 dme-miR-14-3p 6mer2-7 AGACTG 3R 20809865 20809870 + 3R_20809865_20809870_+ 1 1 1 0 Syp FBtr0083961|FBtr0334713|FBtr0083963|FBtr0083959 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 3R + 20809809 20809900 3'utr Syp FlyBase G44280.1 GAGTATATAATGTATATGTAGGCGTAGGAGTGTATAATCTAACTTTACTTTTAAACAGACTGCGTACGTATTAAAAATTTTTAAAATTAATT 53 20809858 0.740886318 15 51 411 0.942028986 1.511883361 0.115942029 0.188679245 0.376811594 53 3 1 65 3R:20809809-20809900 6 Syp FBtr0083963|FBtr0083959|FBtr0083961|FBtr0334713 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 AGACTG 6mer2-7 dme-miR-14-3p 3R + 20809819 20809887 3'utr Syp FlyBase G33456.1 TGTATATGTAGGCGTAGGAGTGTATAATCTAACTTTACTTTTAAACAGACTGCGTACGTATTAAAAATT 18 20809857 0.984098653 7 17 138 0.956521739 1.041392685 0.173913043 0.222222222 0.391304348 18 0 1 22 3R:20809819-20809887 6 27 4027 FBgn0038826 3810.263333 58.4 89.27 0.007086124 0.462328767 0.302453232 7 8 7.5 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 3R 20819758 20819764 - 3R_20819758_20819764_- 0.782911824 0.717966582 0.750439203 0.045923191 CG17271 FBtr0083993 20819624 20820192 3R - 20819752 20819819 3'utr CG17271 FlyBase G52914.1 AAGCGCGACTTTAGAGCAGCAAAAAAAACAGACTGATTGTGTAAACGTTTGTTTTGTACAAAAAGAAA 17 20819783 0.899680616 5 15 88 0.857142857 0.954242509 0.047619048 0.235294118 0.380952381 17 2 1 18 3R:20819752-20819819 7 CG17271 FBtr0083993 20819624 20820192 GTACAAA 7mer-A1 dme-miR-305-5p 3R - 20819749 20819795 3'utr CG17271 FlyBase G39947.1 AAAACAGACTGATTGTGTAAACGTTTGTTTTGTACAAAAAGAAAATG 7 20819767 0.97681865 5 7 48 1 1.176091259 0 0.285714286 0.666666667 7 0 0 15 3R:20819749-20819795 7 4 4028 FBgn0038829 298.4266667 26.90333333 40.93666667 0.013403628 0.148680461 0.097711913 19 3 11 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3R 20820025 20820031 - 3R_20820025_20820031_- 0.808818836 0.808818836 0.808818836 0 CG17271 FBtr0083993|FBtr0083993 20819624|20819624 20820192|20820192 3R - 20819987 20820050 3'utr CG17271 FlyBase G52917.1 GATAAATTTGAATGAAATTTACTTAACATGCTGCAAGCATTCCAATCGGAGAACTTCATTGAAC 13 20820033 0.980051835 5 13 93 1 1.230448921 0.647058824 0.230769231 0.411764706 13 0 0 17 3R:20819987-20820050 7 CG17271 FBtr0083993|FBtr0083993 20819624|20819624 20820192|20820192 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3R - 20820009 20820041 3'utr CG17271 FlyBase G39950.1 GAATGAAATTTACTTAACATGCTGCAAGCATTC 7 20820033 0.865739911 2 7 48 1 1 0.6 0.285714286 0.5 7 0 0 10 3R:20820009-20820041 7 9 4029 FBgn0038829 298.4266667 26.90333333 40.93666667 0.030158163 0.334531037 0.219851804 2 2 2 0.01 dme-miR-190-5p 6mer3-8 ACATAT 3R 20839536 20839541 + 3R_20839536_20839541_+ 1 1 1 0 Synd FBtr0083966|FBtr0334724|FBtr0334725 20839396|20839396|20839396 20839856|20840118|20840118 3R + 20839511 20839550 3'utr Synd FlyBase G44297.1 AGAGTCGTTGATGAAAAATTACCATACATATGTATTAGAA 6 20839539 0.979478684 4 6 38 1 1 0 0.5 0.7 6 0 0 10 3R:20839511-20839550 6 Synd FBtr0083966|FBtr0334724|FBtr0334725 20839396|20839396|20839396 20839856|20840118|20840118 ACATAT 6mer3-8 dme-miR-190-5p 3R + 20839524 20839576 3'utr Synd FlyBase G33472.1 AAAAATTACCATACATATGTATTAGAAATTGTTATGAGCAATCGCTTGCACTA 5 20839538 0.986221132 5 5 34 1 0.698970004 0.2 0 0 5 0 0 5 3R:20839524-20839576 6 4 4030 FBgn0053094 1119.136667 61.56 93.86 0.003574184 0.064977258 0.042616663 -3 -2 -2.5 0.01 dme-miR-980-3p 6mer2-7 GCAGCT 3R 20844802 20844807 + 3R_20844802_20844807_+ 1 1 1 0 CG15695 FBtr0083967 20844628 20844981 3R + 20844732 20844825 3'utr CG15695 FlyBase G44305.2 CTTATCACTGGGGTGGATCTGTGGCCGGATGGTTAGTTGCTGGCAACTACTACTTTTGGCAAACGTAATTGCAGCTCGGCAAATTGTGCGAATG 48 20844800 0.810380064 10 44 316 0.943396226 1.698970004 0.528301887 0.104166667 0.188679245 48 3 0 50 3R:20844732-20844825 6 CG15695 FBtr0083967 20844628 20844981 GCAGCT 6mer2-7 dme-miR-980-3p 3R + 20844763 20844825 3'utr CG15695 FlyBase G33480.1 GTTAGTTGCTGGCAACTACTACTTTTGGCAAACGTAATTGCAGCTCGGCAAATTGTGCGAATG 10 20844800 0.967341196 4 10 60 1 1.278753601 0.736842105 0.7 0.842105263 10 0 0 19 3R:20844763-20844825 6 23 4031 FBgn0038832 423.3333333 18.62 28.26333333 0.054330709 1.235230934 0.813775209 2 2 2 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3R 20929150 20929156 + 3R_20929150_20929156_+ 0.661615511 0.661615511 0.661615511 0 hdly FBtr0113257 20929000 20929213 3R + 20929131 20929179 3'utr hdly FlyBase G44316.1 TATTAAATAATAAATAACTTCTAGTCGGCTTTGCCAGTGGGGCTGGCCC 15 20929149 0.77883771 4 14 126 0.933333333 1.146128036 0.2 0 0 15 1 0 14 3R:20929131-20929179 7 hdly FBtr0113257 20929000 20929213 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 20929136 20929175 3'utr hdly FlyBase G33493.1 AATAATAAATAACTTCTAGTCGGCTTTGCCAGTGGGGCTG 10 20929149 0.975297769 2 10 80 1 1.041392685 0.272727273 0.1 0.181818182 10 0 0 11 3R:20929136-20929175 7 12.5 4032 FBgn0038842 553.6666667 45.08666667 69.06666667 0.022576761 0.277243827 0.180984556 1 1 1 0.01 dme-miR-252-5p 6mer3-8 GTACTT 3R 20973233 20973238 + 3R_20973233_20973238_+ 1 1 1 0 Atpalpha FBtr0089512 20966747 20975284 3R + 20973231 20973343 3'utr Atpalpha FlyBase G44336.1 GTGTACTTCGTCATCATGGCTGAGAACGGCTTCTTGCCCAAGAAACTGTTTGGCATTCGTAAGATGTGGGACTCAAAGGCTGTTAACGATCTAACTGATTCCTACGGTCAAGA 18 20973247 0.973190138 9 17 104 0.956521739 1.342422681 0.043478261 0.222222222 0.391304348 18 1 0 22 3R:20973231-20973343 6 Atpalpha FBtr0089512 20966747 20975284 GTACTT 6mer3-8 dme-miR-252-5p 3R + 20973191 20973259 3'utr Atpalpha FlyBase G33508.1 CGGACAGATCGGCATGATCCAGGCCGCCGCCGGCTTCTTTGTGTACTTCGTCATCATGGCTGAGAACGG 7 20973247 0.962429079 3 6 31 1 1 0.3 0.285714286 0.5 7 0 0 10 3R:20973191-20973259 6 4 4033 FBgn0002921 3927.986667 105.41 160.63 0.001018333 0.037947064 0.024901949 -14 -14 -14 0.01 dme-miR-999-3p 6mer2-7 GTTAAC 3R 20973312 20973317 + 3R_20973312_20973317_+ 1 1 1 0 Atpalpha FBtr0089512 20966747 20975284 3R + 20973231 20973343 3'utr Atpalpha FlyBase G44336.1 GTGTACTTCGTCATCATGGCTGAGAACGGCTTCTTGCCCAAGAAACTGTTTGGCATTCGTAAGATGTGGGACTCAAAGGCTGTTAACGATCTAACTGATTCCTACGGTCAAGA 18 20973326 0.973190138 9 17 104 0.956521739 1.342422681 0.043478261 0.222222222 0.391304348 18 1 0 22 3R:20973231-20973343 6 Atpalpha FBtr0089512 20966747 20975284 GTTAAC 6mer2-7 dme-miR-999-3p 3R + 20973282 20973330 3'utr Atpalpha FlyBase G33509.1 GGCATTCGTAAGATGTGGGACTCAAAGGCTGTTAACGATCTAACTGATT 10 20973313 0.952314308 5 10 49 1 1.176091259 0.066666667 0.4 0.6 10 0 0 15 3R:20973282-20973330 6 6.5 4034 FBgn0002921 3927.986667 105.41 160.63 0.001654792 0.061663979 0.040465666 -14 -1 -7.5 0.01 dme-miR-34-5p 6mer2-7 ACTGCC 3R 20973696 20973701 + 3R_20973696_20973701_+ 1 1 1 0 Atpalpha FBtr0089512 20966747 20975284 3R + 20973678 20973728 3'utr Atpalpha FlyBase G44338.1 TGGCCGCGTTCCTCTCATACTGCCCGGGCATGGAGAAGGGTCTGCGCATGT 5 20973695 0.96780579 3 5 27 1 0.698970004 0.2 0 0 5 0 0 5 3R:20973678-20973728 6 Atpalpha FBtr0089512 20966747 20975284 ACTGCC 6mer2-7 dme-miR-34-5p 3R + 20973664 20973709 3'utr Atpalpha FlyBase G33510.1 CTTTGAAACCGTGCTGGCCGCGTTCCTCTCATACTGCCCGGGCATG 5 20973695 0.974998679 3 4 26 0.833333333 0.698970004 0.666666667 0.2 0.333333333 5 1 0 5 3R:20973664-20973709 6 4 4035 FBgn0002921 3927.986667 105.41 160.63 0.001018333 0.037947064 0.024901949 1 1 1 0.01 dme-miR-190-5p 6mer3-8 ACATAT 3R 20974168 20974173 + 3R_20974168_20974173_+ 1 1 1 0 Atpalpha FBtr0300191|FBtr0333324|FBtr0089513|FBtr0089511|FBtr0089510|FBtr0089512|FBtr0089509|FBtr0089514|FBtr0333325|FBtr0089515|FBtr0089516 20973930|20973930|20973930|20973930|20973930|20966747|20973930|20973930|20973930|20973930|20973930 20975284|20976239|20975284|20974337|20974337|20975284|20975284|20975284|20974337|20975284|20975284 3R + 20974132 20974187 3'utr Atpalpha FlyBase G44342.1 CAGCAACAGCTACGTCTACAACAAGCTACAGCAAGAACATATTACAATATATTTTA 27 20974173 0.886372744 8 19 124 0.657142857 1.06069784 0.028571429 0.259259259 0.428571429 27 11 1 23 3R:20974132-20974187 6 Atpalpha FBtr0089516|FBtr0089511|FBtr0089515|FBtr0333325|FBtr0089514|FBtr0089509|FBtr0089512|FBtr0089510|FBtr0089513|FBtr0333324|FBtr0300191 20973930|20973930|20973930|20973930|20973930|20973930|20966747|20973930|20973930|20973930|20973930 20975284|20974337|20975284|20974337|20975284|20975284|20975284|20974337|20975284|20976239|20975284 ACATAT 6mer3-8 dme-miR-190-5p 3R + 20974154 20974191 3'utr Atpalpha FlyBase G33513.1 AAGCTACAGCAAGAACATATTACAATATATTTTATTTT 14 20974174 0.624678223 4 11 71 0.807692308 1.322219295 0 0.571428571 0.769230769 14 5 0 21 3R:20974154-20974191 6 20 4036 FBgn0002921 3927.986667 105.41 160.63 0.005091667 0.189735319 0.124509743 -5 -6 -5.5 0.01 dme-miR-33-5p 7mer-A1 AATGCAA 3R 20974230 20974236 + 3R_20974230_20974236_+ 0.782911824 0.782911824 0.782911824 0 Atpalpha FBtr0300191|FBtr0333324|FBtr0089513|FBtr0089511|FBtr0089510|FBtr0089512|FBtr0089509|FBtr0089514|FBtr0333325|FBtr0089515|FBtr0089516 20973930|20973930|20973930|20973930|20973930|20966747|20973930|20973930|20973930|20973930|20973930 20975284|20976239|20975284|20974337|20974337|20975284|20975284|20975284|20974337|20975284|20975284 3R + 20974204 20974266 3'utr Atpalpha FlyBase G44343.1 ATTTAAAGTAAACGAGGATAAACAAAAATGCAAGCGATAATTATTTTAAACGTTAAGTAAATT 372 20974232 0.983984346 7 365 1425 0.98206278 2.340444115 0.044843049 0.161290323 0.30044843 372 7 1 438 3R:20974204-20974266 7 Atpalpha FBtr0089516|FBtr0089511|FBtr0089515|FBtr0333325|FBtr0089514|FBtr0089509|FBtr0089512|FBtr0089510|FBtr0089513|FBtr0333324|FBtr0300191 20973930|20973930|20973930|20973930|20973930|20973930|20966747|20973930|20973930|20973930|20973930 20975284|20974337|20975284|20974337|20975284|20975284|20975284|20974337|20975284|20976239|20975284 AATGCAA 7mer-A1 dme-miR-33-5p 3R + 20974204 20974262 3'utr Atpalpha FlyBase G33514.1 ATTTAAAGTAAACGAGGATAAACAAAAATGCAAGCGATAATTATTTTAAACGTTAAGTA 201 20974232 0.969971875 9 193 726 0.96742671 2.171726454 0.039087948 0.39800995 0.605863192 201 9 1 297 3R:20974204-20974262 7 282.5 4037 FBgn0002921 3927.986667 105.41 160.63 0.071919796 2.680011384 1.758700118 -2 -2 -2 0.01 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 21051692 21051698 - 3R_21051692_21051698_- 0.823349562 0.823342576 0.823346069 4.95E-06 Mvl FBtr0301478|FBtr0089521|FBtr0330046|FBtr0301477 21051560|21051381|21051381|21051381 21052187|21052187|21052058|21052187 3R - 21051650 21051724 3'utr Mvl FlyBase G52955.1 AAATAGTTTAAAAGTCTAATAATAAGGCTGTGAAATTAACTGAGTGTAAATCGAACCACTTCAATTGTCTAATCG 75 21051703 0.986650727 8 62 532 0.84375 1.431363764 0.041666667 0.213333333 0.385416667 75 13 2 81 3R:21051650-21051724 7 Mvl FBtr0330046|FBtr0301477|FBtr0089521|FBtr0301478 21051381|21051381|21051381|21051560 21052058|21052187|21052187|21052187 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R - 21051679 21051724 3'utr Mvl FlyBase G39979.1 AAATAGTTTAAAAGTCTAATAATAAGGCTGTGAAATTAACTGAGTG 46 21051706 0.698837865 7 38 318 0.825396825 1.414973348 0 0.282608696 0.476190476 46 10 1 52 3R:21051679-21051724 7 59.5 4038 FBgn0011672 484.1233333 17.95 27.56 0.122902566 3.314763231 2.15892598 5 8 6.5 0.01 dme-miR-980-5p 6mer2-7 AAAAAC 3R 21051825 21051830 - 3R_21051825_21051830_- 0.953377527 0.510056491 0.731717009 0.313475285 Mvl FBtr0301478|FBtr0089521|FBtr0330046|FBtr0301477 21051560|21051381|21051381|21051381 21052187|21052187|21052058|21052187 3R - 21051788 21051883 3'utr Mvl FlyBase G52956.1 AGGACCTGGGATCAGTGTAACACAATAACTAAATTCTAATTGAAAAGCGTACCAAAAACGGTTCATAAACTCTACTTACTGAGAAGCGCGAAGAGA 15 21051808 0.952626043 7 15 62 1 1.255272505 0.166666667 0.2 0.333333333 15 0 0 18 3R:21051788-21051883 6 Mvl FBtr0330046|FBtr0301477|FBtr0089521|FBtr0301478 21051381|21051381|21051381|21051560 21052058|21052187|21052187|21052187 AAAAAC 6mer2-7 dme-miR-980-5p 3R - 21051770 21051849 3'utr Mvl FlyBase G39980.1 TCTAATTGAAAAGCGTACCAAAAACGGTTCATAAACTCTACTTACTGAGAAGCGCGAAGAGACAAAATAGAAAATCCATG 13 21051834 0.931637713 6 12 47 1 1.301029996 0.05 0.384615385 0.6 13 0 0 20 3R:21051770-21051849 6 8.5 4039 FBgn0011672 484.1233333 17.95 27.56 0.017557509 0.473537604 0.308417997 -22 4 -9 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 3R 21054752 21054757 - 3R_21054752_21054757_- 1 1 1 0 Mvl FBtr0306350 21054646 21054959 3R - 21054740 21054782 5'utr Mvl FlyBase G52963.1 CGATGGGGTCCTATAGATTATAAGCTTGACTGTGGTAAGTCTT 13 21054750 0.896236523 4 12 117 0.923076923 0.77815125 0 0 0 13 0 1 12 3R:21054740-21054782 6 Mvl FBtr0306350 21054646 21054959 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 21054747 21054773 5'utr Mvl FlyBase G39985.1 CCTATAGATTATAAGCTTGACTGTGGT 8 21054750 0.808036018 2 7 59 0.928571429 1.113943352 0 0.25 0.571428571 8 1 0 13 3R:21054747-21054773 6 10 4040 FBgn0011672 484.1233333 17.95 27.56 0.020655893 0.557103064 0.362844702 -7 -7 -7 0.01 dme-miR-283-5p 8mer-A1 TGATATTA 3R 21054906 21054913 - 3R_21054906_21054913_- 0.493457552 0.576954152 0.535205852 0.059041012 Mvl FBtr0306350 21054646 21054959 3R - 21054857 21054933 5'utr Mvl FlyBase G52965.1 CACTCCCCCACACACCCTTGTGATATTAACACTAAATCACACGCTTAACACTACTAACACGTACCTAGTAGGGCTCT 10 21054916 0.964914364 4 9 53 0.9 0.954242509 0.1 0 0 10 1 0 9 3R:21054857-21054933 8 Mvl FBtr0306350 21054646 21054959 TGATATTA 8mer-A1 dme-miR-283-5p 3R - 21054904 21054935 5'utr Mvl FlyBase G39986.1 CACACTCCCCCACACACCCTTGTGATATTAAC 5 21054916 0.834775427 2 5 29 1 0.84509804 0 0.4 0.571428571 5 0 0 7 3R:21054904-21054935 8 4.5 4041 FBgn0011672 484.1233333 17.95 27.56 0.009295152 0.250696379 0.163280116 3 3 3 0.01 dme-miR-12-5p 6mer3-8 AATACT 3R 21062155 21062160 - 3R_21062155_21062160_- 1 1 1 0 Cortactin FBtr0306347|FBtr0306348|FBtr0306349|FBtr0084039 21061678|21061678|21061678|21061678 21062225|21062225|21062225|21062225 3R - 21062138 21062169 3'utr Cortactin FlyBase G52978.1 GAAAACGATAATACTGATGTTGGATTATAAAC 11 21062152 0.831483943 2 10 80 0.9375 0.875061263 0.3125 0.363636364 0.5625 11 0 1 15 3R:21062138-21062169 6 Cortactin FBtr0084039|FBtr0306349|FBtr0306348|FBtr0306347 21061678|21061678|21061678|21061678 21062225|21062225|21062225|21062225 AATACT 6mer3-8 dme-miR-12-5p 3R - 21062136 21062169 3'utr Cortactin FlyBase G39996.1 GAAAACGATAATACTGATGTTGGATTATAAACCA 6 21062152 0.891972235 2 6 43 1 1.079181246 0.25 0.666666667 0.833333333 6 0 0 12 3R:21062136-21062169 6 8.5 4042 FBgn0025865 2939.633333 150.03 230.9266667 0.002891517 0.056655336 0.036808222 -8 -8 -8 0.01 dme-miR-1012-3p 6mer2-7 TGACTA 3R 21069590 21069595 + 3R_21069590_21069595_+ 1 1 1 0 AnxB9 FBtr0336797|FBtr0089519|FBtr0336798 21069365|21069365|21069365 21069754|21069754|21069754 3R + 21069501 21069722 3'utr AnxB9 FlyBase G44361.1 AACGAAGACGCAGTGCATTTAAGTCGTAGAATCAGAACCCCAGTCTCGCATCCTGTTGATTATTATAACCATTGTGACTTTTATTATTATGACTATGCACGCCACATGCACATAATTGTATCTCTATAATTACTACACCTCAGGCTACTTGCATTGCTGTGTAGGTATACTTTCAGTTTTGTTTTGAGTCTCATTTGCAAGATATTTTAACTTTTAAAAAAT 233 21069617 0.990753804 43 229 2360 0.979381443 2.45484486 0.089347079 0.193133047 0.35395189 233 6 0 285 3R:21069501-21069722 6 AnxB9 FBtr0089519|FBtr0336797|FBtr0336798 21069365|21069365|21069365 21069754|21069754|21069754 TGACTA 6mer2-7 dme-miR-1012-3p 3R + 21069493 21069637 3'utr AnxB9 FlyBase G33522.1 CACGTTTTAACGAAGACGCAGTGCATTTAAGTCGTAGAATCAGAACCCCAGTCTCGCATCCTGTTGATTATTATAACCATTGTGACTTTTATTATTATGACTATGCACGCCACATGCACATAATTGTATCTCTATAATTACTACA 123 21069617 0.988090865 21 122 1112 0.983050847 2.240549248 0.039548023 0.341463415 0.542372881 123 3 0 174 3R:21069493-21069637 6 20 4043 FBgn0000083 3186.973333 280.66 427.6933333 0.006275547 0.0712606 0.046762478 -27 -27 -27 0.01 dme-miR-980-5p 7mer-A1 AAAAACA 3R 21070396 21070402 + 3R_21070396_21070402_+ 0.782911824 0.782911816 0.78291182 0 AnxB9 FBtr0089517 21070330 21070539 3R + 21070369 21070423 3'utr AnxB9 FlyBase G44362.1 TACCCCACTGTTCAAGTAGAAAATGCCAAAAACAAAAAAACGTTGCATTTCCCCA 14 21070392 0.930705131 4 12 42 0.875 1.146128036 0 0.142857143 0.25 14 2 0 14 3R:21070369-21070423 7 AnxB9 FBtr0089517 21070330 21070539 AAAAACA 7mer-A1 dme-miR-980-5p 3R + 21070369 21070424 3'utr AnxB9 FlyBase G33524.1 TACCCCACTGTTCAAGTAGAAAATGCCAAAAACAAAAAAACGTTGCATTTCCCCAA 10 21070411 0.919047606 3 10 33 1 1.204119983 0 0.4 0.625 10 0 0 16 3R:21070369-21070424 7 11 4044 FBgn0000083 3186.973333 280.66 427.6933333 0.003451551 0.03919333 0.025719363 4 -15 -5.5 0.01 dme-miR-92b-3p 8mer-A1 GTGCAATA 3R 21070529 21070536 + 3R_21070529_21070536_+ 0.628916032 0.628916032 0.628916032 0 AnxB9 FBtr0089517 21070330 21070539 3R + 21070499 21070552 3'utr-intron AnxB9 FlyBase G44364.1 AATCTACAAAACGCTTAGTATTTTCCCTCTGTGCAATAACGTCTAACGTTCAAC 58 21070522 0.966970556 9 55 499 0.974683544 1.58546073 0.17721519 0.293103448 0.481012658 58 1 1 77 3R:21070499-21070552 8 AnxB9 FBtr0089517 21070330 21070539 GTGCAATA 8mer-A1 dme-miR-92b-3p 3R + 21070508 21070550 3'utr-intron AnxB9 FlyBase G33526.1 AACGCTTAGTATTTTCCCTCTGTGCAATAACGTCTAACGTTCA 46 21070534 0.836817315 7 43 425 0.9375 1.77815125 0.234375 0.326086957 0.515625 46 4 0 60 3R:21070508-21070550 8 47.5 4045 FBgn0000083 3186.973333 280.66 427.6933333 0.014904423 0.169243925 0.111060885 7 -5 1 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3R 21110770 21110776 + 3R_21110770_21110776_+ 0.808818836 0.808818836 0.808818836 0 rtet FBtr0084009|FBtr0084009 21110706|21110706 21110834|21110834 3R + 21110728 21110804 3'utr rtet FlyBase G44381.1 TTAAACTCACTAGAGATCAACGGAAGTATTAGCTGCACATTATACTTAATTTATCGTTTTTTACAAGTATTTTATAT 21 21110767 0.990413708 7 19 195 0.923076923 1.079181246 0.153846154 0.19047619 0.346153846 21 1 1 24 3R:21110728-21110804 7 rtet FBtr0084009|FBtr0084009 21110706|21110706 21110834|21110834 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3R + 21110729 21110802 3'utr rtet FlyBase G33536.1 TAAACTCACTAGAGATCAACGGAAGTATTAGCTGCACATTATACTTAATTTATCGTTTTTTACAAGTATTTTAT 23 21110767 0.981726444 10 22 193 0.944444444 1.531478917 0.083333333 0.391304348 0.611111111 23 2 0 34 3R:21110729-21110802 7 13.5 4046 FBgn0028468 207.3333333 14.48 21.91 0.06511254 0.932320442 0.616157006 3 3 3 0.01 dme-miR-999-3p 7mer-m8 AGTTAAC 3R 21115688 21115694 + 3R_21115688_21115694_+ 0.674514267 0.674514267 0.674514267 0 Rab11 FBtr0084011|FBtr0084010 21115383|21115383 21116146|21116146 3R + 21115658 21115717 3'utr Rab11 FlyBase G44387.1 AAAGAATCGAAAGCAACAACATCCGGCTGTAGTTAACTGCGGTTTAAACTGAAGTTTTAT 34 21115679 0.822651977 7 28 158 0.837209302 1.556302501 0.11627907 0.264705882 0.418604651 34 7 0 36 3R:21115658-21115717 7 Rab11 FBtr0084010|FBtr0084011 21115383|21115383 21116146|21116146 AGTTAAC 7mer-m8 dme-miR-999-3p 3R + 21115662 21115701 3'utr Rab11 FlyBase G33545.1 AATCGAAAGCAACAACATCCGGCTGTAGTTAACTGCGGTT 15 21115679 0.966826174 6 13 63 0.923076923 1.380211242 0.307692308 0.466666667 0.692307692 15 2 0 24 3R:21115662-21115701 7 24.5 4047 FBgn0015790 5922.233333 446.8466667 689.1166667 0.004136953 0.054828651 0.035552761 9 9 9 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 21115801 21115806 + 3R_21115801_21115806_+ 1 1 1 0 Rab11 FBtr0084011|FBtr0084010 21115383|21115383 21116146|21116146 3R + 21115769 21115813 3'utr Rab11 FlyBase G44388.1 CAAGCAAAACTAAACACTCCAAATTCAGTTTAAGCTGTAGAACTA 8 21115793 0.884779434 6 8 46 1 1 0.2 0.25 0.4 8 0 0 10 3R:21115769-21115813 6 Rab11 FBtr0084010|FBtr0084011 21115383|21115383 21116146|21116146 AGCTGT 6mer3-8 dme-miR-1008-3p 3R + 21115723 21115814 3'utr Rab11 FlyBase G33546.1 TACAGATCCATGAGTATCGCATAAATCGACCGCCGCGGAAAGAAAGCAAGCAAAACTAAACACTCCAAATTCAGTTTAAGCTGTAGAACTAT 8 21115791 0.987906754 5 6 49 0.777777778 0.84509804 0 0.125 0.222222222 8 2 0 7 3R:21115723-21115814 6 5 4048 FBgn0015790 5922.233333 446.8466667 689.1166667 0.000844276 0.011189521 0.007255665 8 10 9 0.01 dme-miR-184-5p 6mer3-8 TGATAA 3R 21116033 21116038 + 3R_21116033_21116038_+ 1 1 1 0 Rab11 FBtr0084011|FBtr0084010 21115383|21115383 21116146|21116146 3R + 21115987 21116043 3'utr Rab11 FlyBase G44390.1 GGTTTCTCGCAACATTTTAAACGATTGGCCACTTGGTAAAACTAGCTGATAAAGAGA 5 21116033 0.955132334 4 5 27 1 0.698970004 0.4 0 0 5 0 0 5 3R:21115987-21116043 6 Rab11 FBtr0084010|FBtr0084011 21115383|21115383 21116146|21116146 TGATAA 6mer3-8 dme-miR-184-5p 3R + 21116005 21116049 3'utr Rab11 FlyBase G33547.1 AAACGATTGGCCACTTGGTAAAACTAGCTGATAAAGAGAAATCAA 6 21116029 0.948312603 5 6 26 1 0.954242509 0.444444444 0.333333333 0.555555556 6 0 0 9 3R:21116005-21116049 6 4.5 4049 FBgn0015790 5922.233333 446.8466667 689.1166667 0.000759848 0.010070569 0.006530099 0 4 2 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3R 21116121 21116127 + 3R_21116121_21116127_+ 0.521223855 0.521223855 0.521223855 0 Rab11 FBtr0084011|FBtr0084010 21115383|21115383 21116146|21116146 3R + 21116088 21116146 3'utr Rab11 FlyBase G44391.1 CGAAATAACATCATTTGTGTTTGCTATGTTAAGTGTGATTAAATAAATATAATTTAAAT 13 21116128 0.904332942 8 11 119 0.8 1.079181246 0 0.153846154 0.266666667 13 3 0 12 3R:21116088-21116146 7 Rab11 FBtr0084010|FBtr0084011 21115383|21115383 21116146|21116146 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 21116092 21116131 3'utr Rab11 FlyBase G33548.1 ATAACATCATTTGTGTTTGCTATGTTAAGTGTGATTAAAT 6 21116129 0.989468937 5 5 48 0.818181818 0.954242509 0.181818182 0.666666667 0.818181818 6 2 0 9 3R:21116092-21116131 7 9 4050 FBgn0015790 5922.233333 446.8466667 689.1166667 0.001519697 0.020141137 0.013060198 -7 -8 -7.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 21119472 21119477 - 3R_21119472_21119477_- 1 1 1 0 slmb FBtr0330049|FBtr0084032 21119250|21119250 21120458|21120719 3R - 21119448 21119495 3'utr slmb FlyBase G53019.1 AAGTTCCAATGCTATACTTGATCTGGATCACGATCACGCCGCTTCCGC 59 21119478 0.728193433 5 55 444 0.93442623 1.153814864 0.163934426 0.033898305 0.06557377 59 1 3 57 3R:21119448-21119495 6 slmb FBtr0330049|FBtr0084032 21119250|21119250 21120458|21120719 TGATCT 6mer3-8 dme-bantam-3p 3R - 21119455 21119492 3'utr slmb FlyBase G40023.1 TTCCAATGCTATACTTGATCTGGATCACGATCACGCCG 21 21119478 0.740252078 2 17 160 0.878787879 0.860338007 0.333333333 0.428571429 0.636363636 21 1 3 29 3R:21119455-21119492 6 40 4051 FBgn0023423 1620.336667 64.75333333 99.38333333 0.024686228 0.617728817 0.402481972 1 1 1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 21119535 21119540 - 3R_21119535_21119540_- 1 1 1 0 slmb FBtr0330049|FBtr0330049|FBtr0330049|FBtr0084032|FBtr0084032|FBtr0084032 21119250|21119250|21119250|21119250|21119250|21119250 21120458|21120458|21120458|21120719|21120719|21120719 3R - 21119527 21119559 3'utr slmb FlyBase G53020.1 ATGTATGCCGTTCGTTGATTGTGATCAATGGAT 8 21119542 0.716516843 5 8 66 1 0.954242509 0.333333333 0.125 0.222222222 8 0 0 9 3R:21119527-21119559 6 slmb FBtr0330049|FBtr0330049|FBtr0330049|FBtr0084032|FBtr0084032|FBtr0084032 21119250|21119250|21119250|21119250|21119250|21119250 21120458|21120458|21120458|21120719|21120719|21120719 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 21119496 21119551 3'utr slmb FlyBase G40024.1 CGTTCGTTGATTGTGATCAATGGATATTTTACTATGTGTATTGCTATTTGTAAGTT 6 21119540 0.990275944 5 6 67 1 0.954242509 0.111111111 0.5 0.666666667 6 0 0 9 3R:21119496-21119551 6 5.5 4052 FBgn0023423 1620.336667 64.75333333 99.38333333 0.003394356 0.084937712 0.055341271 2 0 1 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 21119642 21119647 - 3R_21119642_21119647_- 1 1 1 0 slmb FBtr0330049|FBtr0084032 21119250|21119250 21120458|21120719 3R - 21119579 21119692 3'utr slmb FlyBase G53021.1 AATGGATCCATTGTACTGCAATATATAACCGATTCTTTGATTGATTGATCTATGCTAACTATAGGTTTTAGATATACCGATGTATGTAGAAAATAGCAAATTCCCAGGCAATTT 65 21119648 0.989110557 16 63 594 0.973333333 1.86332286 0.386666667 0.123076923 0.24 65 2 0 73 3R:21119579-21119692 6 slmb FBtr0330049|FBtr0084032 21119250|21119250 21120458|21120719 TGATCT 6mer3-8 dme-bantam-3p 3R - 21119597 21119692 3'utr slmb FlyBase G40025.1 AATGGATCCATTGTACTGCAATATATAACCGATTCTTTGATTGATTGATCTATGCTAACTATAGGTTTTAGATATACCGATGTATGTAGAAAATAG 41 21119648 0.748865972 10 40 367 0.984126984 1.792391689 0.142857143 0.365853659 0.587301587 41 1 0 62 3R:21119597-21119692 6 34 4053 FBgn0023423 1620.336667 64.75333333 99.38333333 0.020983294 0.525069494 0.342109676 1 1 1 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 21120011 21120017 - 3R_21120011_21120017_- 0.658999527 0.658999527 0.658999527 0 slmb FBtr0330049|FBtr0084032 21119250|21119250 21120458|21120719 3R - 21119878 21120033 3'utr slmb FlyBase G53022.1 ACAAGTATCGCGTTTAGGCAGCTGCCGCCTCAAGAATCGCAGCAGGAATCTTCAGCGCGGCCAGAAGAATCAGTCTTTAGCATAAATGTTAGTTAGAGTTGCATCATTGAAATTGGCAGAGCGCGTTGCCGTTTTGCACATTTGTAACCTATTTTA 58 21120019 0.980102631 14 54 315 0.970149254 1.812913357 0.164179104 0.157894737 0.28358209 57 2 0 65 3R:21119878-21120033 7 slmb FBtr0330049|FBtr0084032 21119250|21119250 21120458|21120719 GGCAGCT 7mer-m8 dme-miR-980-3p 3R - 21119999 21120044 3'utr slmb FlyBase G40029.1 AGCTCAAATACACAAGTATCGCGTTTAGGCAGCTGCCGCCTCAAGA 28 21120020 0.686424971 6 27 152 0.961538462 1.698970004 0.269230769 0.535714286 0.75 28 2 0 50 3R:21119999-21120044 7 31 4054 FBgn0023423 1620.336667 64.75333333 99.38333333 0.019131827 0.478739833 0.311923528 2 3 2.5 0.01 dme-bantam-3p 6mer2-7 GATCTC 3R 21120367 21120372 - 3R_21120367_21120372_- 1 1 1 0 slmb FBtr0330049|FBtr0333931|FBtr0084032 21119250|21120193|21119250 21120458|21120719|21120719 3R - 21120346 21120473 stop_codon slmb FlyBase G53024.1 GATTATGATGAATAATGAGTGAATGGTCGTTAACCAGCAGCATATACATACACACAGCAGACTTGTTTAAACAAAAAACGATGTTGAACCCAAGATACAGCGATCTCTAAGCGTCTATTTTACACACT 343 21120366 0.783030195 15 337 1539 0.985507246 2.133538908 0.157004831 0.160349854 0.304347826 343 4 2 408 3R:21120346-21120473 6 slmb FBtr0330049|FBtr0333931|FBtr0084032 21119250|21120193|21119250 21120458|21120719|21120719 GATCTC 6mer2-7 dme-bantam-3p 3R - 21120337 21120394 3'utr slmb FlyBase G40032.1 GATGTTGAACCCAAGATACAGCGATCTCTAAGCGTCTATTTTACACACTACATCCACA 205 21120366 0.954246157 3 202 900 0.987179487 2.488550717 0.128205128 0.380487805 0.592948718 205 4 0 308 3R:21120337-21120394 6 260 4055 FBgn0023423 1620.336667 64.75333333 99.38333333 0.16046048 4.015237311 2.616132819 -6 -6 -6 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 21140199 21140204 + 3R_21140199_21140204_+ 1 1 1 0 meigo FBtr0084017|FBtr0113259 21140038|21140038 21140365|21140365 3R + 21140089 21140229 3'utr meigo FlyBase G44422.2 AGAAGACAATGCTTCCGGCTCGAGCGGCTGCAGCGCCAAAGTTTCCCCATTTCCTAGAACTGCTTATCGTACAAAGGATTCTAGCTATAGCGAACACAGCATTCGATACTTGATCTGCAACCCATAGACCGTCGTTTAAGT 380 21140199 0.976958796 20 357 2321 0.940919037 1.633468456 0.111597374 0.168421053 0.308533917 380 18 9 430 3R:21140089-21140229 6 meigo FBtr0113259|FBtr0084017 21140038|21140038 21140365|21140365 TGATCT 6mer3-8 dme-bantam-3p 3R + 21140089 21140228 3'utr meigo FlyBase G33560.1 AGAAGACAATGCTTCCGGCTCGAGCGGCTGCAGCGCCAAAGTTTCCCCATTTCCTAGAACTGCTTATCGTACAAAGGATTCTAGCTATAGCGAACACAGCATTCGATACTTGATCTGCAACCCATAGACCGTCGTTTAAG 234 21140199 0.80781479 25 217 1375 0.93982808 1.737722593 0.111747851 0.363247863 0.573065903 234 16 5 328 3R:21140089-21140228 6 267 4056 FBgn0250820 369.6666667 29.78 45.5 0.722272317 8.965748825 5.868131868 0 0 0 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 21140271 21140276 + 3R_21140271_21140276_+ 1 1 1 0 meigo FBtr0084017|FBtr0113259 21140038|21140038 21140365|21140365 3R + 21140249 21140323 3'utr meigo FlyBase G44423.1 TATTAGAAAAGGAACAAATATTGTGCAAAAGTTTACACCAGACCTGCGGGTCTCTAACATACAGGATCATTCAAT 63 21140269 0.888460313 5 61 294 0.971428571 1.531478917 0.185714286 0.111111111 0.2 63 1 1 68 3R:21140249-21140323 6 meigo FBtr0113259|FBtr0084017 21140038|21140038 21140365|21140365 GTGCAA 6mer3-8 dme-miR-92b-3p 3R + 21140250 21140289 3'utr meigo FlyBase G33561.1 ATTAGAAAAGGAACAAATATTGTGCAAAAGTTTACACCAG 52 21140269 0.665891228 2 49 237 0.972222222 1.544068044 0.208333333 0.307692308 0.5 52 1 1 70 3R:21140250-21140289 6 53.5 4057 FBgn0250820 369.6666667 29.78 45.5 0.144724977 1.796507723 1.175824176 2 2 2 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 21159358 21159363 - 3R_21159358_21159363_- 0.730949445 0.730949445 0.730949445 0 CG10824 FBtr0084028|FBtr0084028|FBtr0084028 21159236|21159236|21159236 21159389|21159389|21159389 3R - 21159320 21159375 3'utr CG10824 FlyBase G53041.1 GCCCATTTTTTATGTGATCACTACATTTTCAAAGCTTTACAATTATATGTATACAT 32 21159366 0.978663783 9 23 301 0.785714286 0.740362689 0.119047619 0.1875 0.380952381 32 4 5 33 3R:21159320-21159375 6 CG10824 FBtr0084028|FBtr0084028|FBtr0084028 21159236|21159236|21159236 21159389|21159389|21159389 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 21159332 21159375 3'utr CG10824 FlyBase G40046.1 GCCCATTTTTTATGTGATCACTACATTTTCAAAGCTTTACAATT 31 21159366 0.587900496 11 26 280 0.818181818 0.711204461 0.090909091 0.322580645 0.522727273 31 2 6 36 3R:21159332-21159375 6 28.5 4058 FBgn0038865 99.77666667 6.58 10.09 0.285637925 4.331306991 2.824578791 3 3 3 0.01 dme-miR-283-5p 6mer2-7 GATATT 3R 21213975 21213980 + 3R_21213975_21213980_+ 1 1 1 0 SNF4Agamma FBtr0301586|FBtr0301588 21212526|21212526 21214269|21214269 3R + 21213947 21214006 3'utr SNF4Agamma FlyBase G44457.1 ATTACTAGATTAAACAATGAGAAATTTGGATATTGAATTAATAATGGTAAAAGGCTTAAC 24 21213973 0.955261367 7 24 187 1 1.477121255 0 0.25 0.4 24 0 0 30 3R:21213947-21214006 6 SNF4Agamma FBtr0301588|FBtr0301586 21212526|21212526 21214269|21214269 GATATT 6mer2-7 dme-miR-283-5p 3R + 21213952 21213987 3'utr SNF4Agamma FlyBase G33590.1 TAGATTAAACAATGAGAAATTTGGATATTGAATTAA 21 21213973 0.862708028 5 21 164 1 1.462397998 0.034482759 0.285714286 0.482758621 21 0 0 29 3R:21213952-21213987 6 21.5 4059 FBgn0264357 1601.583333 44.32333333 67.41333333 0.013424216 0.485071821 0.318928006 2 2 2 0.01 dme-miR-988-3p 8mer-A1 ACAAGGGA 3R 21266220 21266227 - 3R_21266220_21266227_- 0.612212333 0.61221408 0.612213207 1.27E-06 Rab1 FBtr0084104 21266027 21266947 3R - 21266193 21266279 3'utr Rab1 FlyBase G53063.1 AACATTTTTAGATTTAACGTCGAGCGATTGTGTGTTTGAATTATCGTGTGACACAAGGGATTTGTTTAGGCACATAATTAGTGTAAT 20 21266216 0.797704839 13 18 165 0.913043478 1.322219295 0.347826087 0.1 0.217391304 20 2 0 21 3R:21266193-21266279 8 Rab1 FBtr0084104 21266027 21266947 ACAAGGGA 8mer-A1 dme-miR-988-3p 3R - 21266208 21266273 3'utr Rab1 FlyBase G40066.1 TTTAGATTTAACGTCGAGCGATTGTGTGTTTGAATTATCGTGTGACACAAGGGATTTGTTTAGGCA 9 21266216 0.971630058 7 9 61 1 1.041392685 0.545454545 0.222222222 0.363636364 9 0 0 11 3R:21266208-21266273 8 8 4060 FBgn0016700 3065.546667 206.5566667 315.7 0.002609649 0.038730292 0.025340513 -11 -11 -11 0.01 dme-miR-1002-5p 7mer-m8 CTACTTA 3R 21266397 21266403 - 3R_21266397_21266403_- 0.589039012 0.592483113 0.590761062 0.002435346 Rab1 FBtr0084104 21266027 21266947 3R - 21266385 21266466 3'utr Rab1 FlyBase G53065.1 TAACTACACATTAATTGAGCGCAGGCGACGGCAGGAGCAATTGTACTTGTCCTGTGTCAGCTACTACTTACCACTATGTATA 21 21266399 0.965452715 7 21 127 1 1.361727836 0.347826087 0.095238095 0.173913043 21 0 0 23 3R:21266385-21266466 7 Rab1 FBtr0084104 21266027 21266947 CTACTTA 7mer-m8 dme-miR-1002-5p 3R - 21266372 21266454 3'utr Rab1 FlyBase G40068.1 AATTGAGCGCAGGCGACGGCAGGAGCAATTGTACTTGTCCTGTGTCAGCTACTACTTACCACTATGTATACATATGTATGTGT 11 21266399 0.963019567 7 10 58 0.928571429 0.812913357 0.428571429 0.181818182 0.357142857 11 0 1 13 3R:21266372-21266454 7 8 4061 FBgn0016700 3065.546667 206.5566667 315.7 0.002609649 0.038730292 0.025340513 -4 -4 -4 0.01 dme-miR-190-5p 6mer3-8 ACATAT 3R 21271219 21271224 - 3R_21271219_21271224_- 1 1 1 0 CG3308 FBtr0084102 21271076 21271954 3R - 21271138 21271219 3'utr CG3308 FlyBase G53079.1 TACAAAAGCGTTGTACTGAACTGATCGACCCGCGGAGGTTGCATAAAATCCGCTTTGTGCCCATTGTCCGCACACAGACACA 58 21271195 0.967009972 9 53 289 0.897058824 1.785329835 0.308823529 0.172413793 0.294117647 58 7 0 61 3R:21271138-21271219 1 CG3308 FBtr0084102 21271076 21271954 ACATAT 6mer3-8 dme-miR-190-5p 3R - 21271146 21271222 3'utr CG3308 FlyBase G40079.1 ATATACAAAAGCGTTGTACTGAACTGATCGACCCGCGGAGGTTGCATAAAATCCGCTTTGTGCCCATTGTCCGCACA 51 21271208 0.754029787 12 47 259 0.929577465 1.217483944 0.14084507 0.31372549 0.507042254 51 2 3 66 3R:21271146-21271222 4 4.5 4062 FBgn0038877 892.1133333 50.83666667 77.60666667 0.005044202 0.088518786 0.057984709 -29 -16 -22.5 0.01 dme-miR-190-5p 6mer3-8 ACATAT 3R 21271270 21271275 - 3R_21271270_21271275_- 1 1 1 0 CG3308 FBtr0084102 21271076 21271954 3R - 21271244 21271312 3'utr CG3308 FlyBase G53080.1 GATATTCAACATACAAACACATTAGTTAGGCTATGAAACATATTGAATATCGTGCGCCTATACAAACTA 10 21271288 0.93816173 7 9 61 0.916666667 0.740362689 0.25 0.2 0.333333333 10 0 1 11 3R:21271244-21271312 6 CG3308 FBtr0084102 21271076 21271954 ACATAT 6mer3-8 dme-miR-190-5p 3R - 21271249 21271305 3'utr CG3308 FlyBase G40080.1 AACATACAAACACATTAGTTAGGCTATGAAACATATTGAATATCGTGCGCCTATACA 14 21271287 0.754516739 7 13 80 0.875 1.322219295 0.166666667 0.5 0.708333333 14 3 0 21 3R:21271249-21271305 6 10 4063 FBgn0038877 892.1133333 50.83666667 77.60666667 0.011209338 0.196708413 0.128854909 13 12 12.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 21271338 21271343 - 3R_21271338_21271343_- 0.730949445 0.730949445 0.730949445 0 CG3308 FBtr0084102|FBtr0084102|FBtr0084102 21271076|21271076|21271076 21271954|21271954|21271954 3R - 21271323 21271391 3'utr CG3308 FlyBase G53081.1 TTCTTGTTGCGACGATGACGATGATGATGATGATTATGGGAAACGTAATGTGATCATTTTAAAAGCTAA 36 21271345 0.704356967 14 34 253 0.953488372 1.311753861 0.558139535 0.138888889 0.279069767 36 1 1 41 3R:21271323-21271391 6 CG3308 FBtr0084102|FBtr0084102|FBtr0084102 21271076|21271076|21271076 21271954|21271954|21271954 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 21271317 21271443 3'utr CG3308 FlyBase G40081.1 ACTTTTAGTTTGTGTCTCTGTTAGCCTGTAGTCGTACTTTTGTACATATTTATTCTTGTTGCGACGATGACGATGATGATGATGATTATGGGAAACGTAATGTGATCATTTTAAAAGCTAATTAGTT 37 21271335 0.988787621 16 34 342 0.903225806 1.748188027 0.483870968 0.486486486 0.693548387 37 6 0 56 3R:21271317-21271443 6 22 4064 FBgn0038877 892.1133333 50.83666667 77.60666667 0.024660544 0.432758508 0.283480801 2 -8 -3 0.01 dme-miR-980-3p 6mer2-7 GCAGCT 3R 21271485 21271490 - 3R_21271485_21271490_- 1 1 1 0 CG3308 FBtr0084102 21271076 21271954 3R - 21271474 21271523 3'utr CG3308 FlyBase G53083.1 CTCCCGAAGCGATATATGTTAATGTTAAGTGCTGCAGCTTGTCTTTTGTT 16 21271482 0.967894432 10 15 143 0.95 0.977723605 0.05 0.25 0.4 16 0 1 19 3R:21271474-21271523 6 CG3308 FBtr0084102 21271076 21271954 GCAGCT 6mer2-7 dme-miR-980-3p 3R - 21271462 21271508 3'utr CG3308 FlyBase G40082.1 ATGTTAATGTTAAGTGCTGCAGCTTGTCTTTTGTTTGTTTCTTCTGT 23 21271482 0.90662099 8 23 237 1 1.531478917 0.294117647 0.260869565 0.5 23 0 0 34 3R:21271462-21271508 6 17.5 4065 FBgn0038877 892.1133333 50.83666667 77.60666667 0.019616342 0.344239722 0.225496091 -8 -8 -8 0.01 dme-miR-932-5p 6mer3-8 GGAATT 3R 21271650 21271655 - 3R_21271650_21271655_- 0.591720885 0.591720885 0.591720885 0 CG3308 FBtr0084102 21271076 21271954 3R - 21271571 21271680 3'utr CG3308 FlyBase G53084.1 TTGCAGGGTCTAGCTTTAAGTTGTTGGAATTTCCGAGCAATTGCTTTATTTACTCGAGTACCCAGAGAAACGGTGCCAAGGTGGTGCCTCGTGAACGTCGACTCCGGATT 16 21271640 0.986028902 11 15 123 0.947368421 1.255272505 0.052631579 0.0625 0.210526316 16 1 0 18 3R:21271571-21271680 6 CG3308 FBtr0084102 21271076 21271954 GGAATT 6mer3-8 dme-miR-932-5p 3R - 21271630 21271689 3'utr CG3308 FlyBase G40083.1 GATCGAAGTTTGCAGGGTCTAGCTTTAAGTTGTTGGAATTTCCGAGCAATTGCTTTATTT 9 21271650 0.759354835 5 8 79 0.833333333 1 0.333333333 0.333333333 0.5 9 2 0 10 3R:21271630-21271689 6 6 4066 FBgn0038877 892.1133333 50.83666667 77.60666667 0.006725603 0.118025048 0.077312946 -15 -5 -10 0.01 dme-miR-305-3p 7mer-m8 ATGTGCC 3R 21271836 21271842 - 3R_21271836_21271842_- 0.674515655 0.674515655 0.674515655 0 CG3308 FBtr0084102 21271076 21271954 3R - 21271770 21272096 lincRNA_intron-lincRNA_exon CG3308 FlyBase G53085.1 CAGATATTGTACCTTCCAACGCAACGAGCCGTGCAGTTTGCCCGCCATTGTAGAGATGATAGCCGCCTTCATGAAGAAAAGCCCGGACGAGGTGGCTTTGGCCACTGCCTTTAATGCCCTGAAACTGTTTGGCTTGTCCTAGAAAATGGTAAAGGAGCCACATGGAACTGAACGACAAAGTGTGCCACCCAGCAGCTTTAAACCCGTAACTCTATAGATTCAACGAGCCTGAGATTCACGATAGACTCATACCTATGTGCCTTAACCACTAATCGAATTCAGGATGAAGCGCTTATCCTGATCCCCACACATACACACATCCACAAA 194 21271841 0.984368764 32 189 994 0.974137931 2.053078443 0.254310345 0.164948454 0.301724138 194 5 1 226 3R:21271770-21272096 7 CG3308 FBtr0084102 21271076 21271954 ATGTGCC 7mer-m8 dme-miR-305-3p 3R - 21271789 21271946 3'utr CG3308 FlyBase G40084.1 AAAGGAGCCACATGGAACTGAACGACAAAGTGTGCCACCCAGCAGCTTTAAACCCGTAACTCTATAGATTCAACGAGCCTGAGATTCACGATAGACTCATACCTATGTGCCTTAACCACTAATCGAATTCAGGATGAAGCGCTTATCCTGATCCCCAC 121 21271841 0.981685715 13 116 574 0.938888889 1.625826713 0.261111111 0.363636364 0.572222222 121 8 3 169 3R:21271789-21271946 7 65.5 4067 FBgn0038877 892.1133333 50.83666667 77.60666667 0.073421165 1.288440102 0.843999656 -1 -1 -1 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3R 21320908 21320913 - 3R_21320908_21320913_- 1 1 1 0 CG16791 FBtr0343807|FBtr0343805|FBtr0084095|FBtr0343806 21318298|21320758|21318298|21320758 21321053|21321053|21321053|21321053 3R - 21320877 21320990 3'utr CG16791 FlyBase G53092.1 AAAGCGCTACGTATACATCACTAATTCCCCGAAACCAAATCCCATTATGATCATCGACATGTATACAAGACACATCTAAGACTTATTGTATATTTCGTGTAGTATGTGTAAGGC 162 21320905 0.976922097 11 154 1008 0.964102564 1.797036595 0.071794872 0.166666667 0.307692308 162 5 2 188 3R:21320877-21320990 6 CG16791 FBtr0343806|FBtr0084095|FBtr0343805|FBtr0343807 21320758|21318298|21320758|21318298 21321053|21321053|21321053|21321053 AAGACT 6mer3-8 dme-miR-14-3p 3R - 21320881 21320962 3'utr CG16791 FlyBase G40094.1 CCGAAACCAAATCCCATTATGATCATCGACATGTATACAAGACACATCTAAGACTTATTGTATATTTCGTGTAGTATGTGTA 121 21320905 0.752327661 8 111 726 0.924324324 1.931966115 0.081081081 0.380165289 0.594594595 121 13 1 171 3R:21320881-21320962 6 107.5 4068 FBgn0038881 628.8366667 15.01 23.02333333 0.170950591 7.161892072 4.669176198 -8 -8 -8 0.01 dme-miR-317-3p 6mer2-7 GTGTTC 3R 21361863 21361868 + 3R_21361863_21361868_+ 1 1 1 0 pre-mod(mdg4)-Z FBtr0303402 21361829 21362131 3R + 21361839 21361882 3'utr pre-mod(mdg4)-Z FlyBase G44529.1 TATACATTCCCAACCCAAACGTTCGTGTTCTGTTAGGGCTAAGC 8 21361869 0.983086829 3 8 63 1 0.954242509 0 0.125 0.222222222 8 0 0 9 3R:21361839-21361882 6 pre-mod(mdg4)-Z FBtr0303402 21361829 21362131 GTGTTC 6mer2-7 dme-miR-317-3p 3R + 21361843 21361883 3'utr pre-mod(mdg4)-Z FlyBase G33639.1 CATTCCCAACCCAAACGTTCGTGTTCTGTTAGGGCTAAGCT 8 21361869 0.654697288 2 8 70 1 1.041392685 0.181818182 0.25 0.454545455 8 0 0 11 3R:21361843-21361883 6 8 4069 FBgn0261838 149.3333333 9.943333333 15.14333333 0.053571429 0.804559169 0.528285274 -6 -6 -6 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 3R 21361925 21361931 + 3R_21361925_21361931_+ 0.823349562 0.823349562 0.823349562 0 pre-mod(mdg4)-Z FBtr0303402 21361829 21362131 3R + 21361905 21361993 3'utr pre-mod(mdg4)-Z FlyBase G44530.1 TGAGCGTATATCATTGATTTAGACTGAGTGTCCCGAGCCTAGTTAGGATGGGTAAGTAGCCTGTTCATCTGGGATCTCAAAGTACCATT 96 21361923 0.888712736 17 88 710 0.923076923 1.73239376 0.247863248 0.166666667 0.316239316 96 8 1 108 3R:21361905-21361993 7 pre-mod(mdg4)-Z FBtr0303402 21361829 21362131 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 21361902 21361987 3'utr pre-mod(mdg4)-Z FlyBase G33640.1 TCTTGAGCGTATATCATTGATTTAGACTGAGTGTCCCGAGCCTAGTTAGGATGGGTAAGTAGCCTGTTCATCTGGGATCTCAAAGT 65 21361923 0.791859326 10 62 475 0.927083333 1.347330015 0.364583333 0.323076923 0.541666667 65 4 3 89 3R:21361902-21361987 7 65.5 4070 FBgn0261838 149.3333333 9.943333333 15.14333333 0.438616071 6.587328193 4.325335681 2 2 2 0.01 dme-miR-965-3p 6mer2-7 ACGCTT 3R 21362048 21362053 + 3R_21362048_21362053_+ 1 1 1 0 pre-mod(mdg4)-Z FBtr0303402 21361829 21362131 3R + 21361994 21362127 3'utr pre-mod(mdg4)-Z FlyBase G44531.1 TTTGTAATTCTTAAAGTCCCGGGTCATATTATTTATTCTGTTCTCATTGCTTAGACGCTTTTGGCCACGGCACTGACTTAAACAATGGCTTGTGTTACGTACAAAATATGAACTCTTAATAAAATCAGATGAAC 47 21362054 0.98641442 12 44 376 0.944444444 1.707570176 0.148148148 0.14893617 0.259259259 47 3 0 51 3R:21361994-21362127 6 pre-mod(mdg4)-Z FBtr0303402 21361829 21362131 ACGCTT 6mer2-7 dme-miR-965-3p 3R + 21361999 21362100 3'utr pre-mod(mdg4)-Z FlyBase G33641.1 AATTCTTAAAGTCCCGGGTCATATTATTTATTCTGTTCTCATTGCTTAGACGCTTTTGGCCACGGCACTGACTTAAACAATGGCTTGTGTTACGTACAAAAT 29 21362054 0.904392592 11 26 212 0.918918919 1.531478917 0.135135135 0.24137931 0.405405405 29 3 0 34 3R:21361999-21362100 6 20.5 4071 FBgn0261838 149.3333333 9.943333333 15.14333333 0.137276786 2.06168287 1.353731015 -6 -6 -6 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 21363205 21363210 - 3R_21363205_21363210_- 1 1 1 0 pre-mod(mdg4)-E FBtr0343748|FBtr0343749 21362966|21362966 21363279|21363279 3R - 21363179 21363232 3'utr pre-mod(mdg4)-E FlyBase G53111.1 TGAACTAATGTCGATGTAGAGTGTACCTAAGGTGAGCGATTTTTAGCGGGCAGC 46 21363211 0.830108965 2 45 293 0.980769231 1.707570176 0.288461538 0.130434783 0.230769231 46 1 0 51 3R:21363179-21363232 6 pre-mod(mdg4)-E FBtr0343749|FBtr0343748 21362966|21362966 21363279|21363279 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 21363191 21363235 3'utr pre-mod(mdg4)-E FlyBase G40110.1 TGTTGAACTAATGTCGATGTAGAGTGTACCTAAGGTGAGCGATTT 40 21363211 0.8181754 4 37 225 0.876923077 1.755874856 0.276923077 0.425 0.646153846 40 8 0 57 3R:21363191-21363235 6 41.5 4072 FBgn0266172 87.15333333 4.996666667 7.713333333 0.476172263 8.305537025 5.380293863 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 21363255 21363260 - 3R_21363255_21363260_- 1 1 1 0 pre-mod(mdg4)-E FBtr0343748|FBtr0343749 21362966|21362966 21363279|21363279 3R - 21363243 21363268 3'utr pre-mod(mdg4)-E FlyBase G53112.1 GTGGGCTCACCAAAATCTGTGGTTTT 7 21363253 0.827501698 3 7 53 1 0.954242509 0.777777778 0.142857143 0.333333333 7 0 0 9 3R:21363243-21363268 6 pre-mod(mdg4)-E FBtr0343749|FBtr0343748 21362966|21362966 21363279|21363279 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 21363243 21363273 3'utr pre-mod(mdg4)-E FlyBase G40111.1 CGGTTGTGGGCTCACCAAAATCTGTGGTTTT 10 21363253 0.869280638 3 9 83 0.923076923 0.77815125 0.461538462 0.3 0.461538462 10 0 1 12 3R:21363243-21363273 6 8.5 4073 FBgn0266172 87.15333333 4.996666667 7.713333333 0.097529259 1.701134089 1.1019879 -7 -7 -7 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 21371447 21371452 - 3R_21371447_21371452_- 1 1 1 0 pre-mod(mdg4)-O FBtr0347107 21370916 21371636 3R - 21371431 21371477 5'utr pre-mod(mdg4)-O FlyBase G53119.1 GTTTAATGAATAAGATTGTGAATATAGCTGTAAGACCCCTGAGTTCG 32 21371462 0.732034282 5 30 235 0.945945946 1.544068044 0.27027027 0.15625 0.27027027 32 2 0 35 3R:21371431-21371477 6 pre-mod(mdg4)-O FBtr0347107 21370916 21371636 AGCTGT 6mer3-8 dme-miR-1008-3p 3R - 21371430 21371480 5'utr pre-mod(mdg4)-O FlyBase G40117.1 GAAGTTTAATGAATAAGATTGTGAATATAGCTGTAAGACCCCTGAGTTCGA 22 21371462 0.981986514 3 20 151 0.837837838 0.889301703 0.351351351 0.409090909 0.648648649 22 3 3 31 3R:21371430-21371480 6 27 4074 FBgn0267651 33.88666667 1.706666667 2.616666667 0.796773559 15.8203125 10.31847134 10 10 10 0.01 dme-miR-92b-3p 7mer-m8 GTGCAAT 3R 21371605 21371611 - 3R_21371605_21371611_- 0.659000077 0.659000077 0.659000077 0 pre-mod(mdg4)-O FBtr0347107 21370916 21371636 3R - 21371539 21371635 5'utr pre-mod(mdg4)-O FlyBase G53120.1 TTGGCTATCCAACTGGTCTTGGCAGTGCAATGTAGTTACTAAGTAACAGCTATTAAAAGTACATATCTAGGAAATGGACTATGTACACTTATTTTCG 19 21371616 0.97227807 9 19 139 1 1.431363764 0.185185185 0.210526316 0.444444444 19 0 0 27 3R:21371539-21371635 7 pre-mod(mdg4)-O FBtr0347107 21370916 21371636 GTGCAAT 7mer-m8 dme-miR-92b-3p 3R - 21371586 21371630 5'utr pre-mod(mdg4)-O FlyBase G40118.1 TATCCAACTGGTCTTGGCAGTGCAATGTAGTTACTAAGTAACAGC 8 21371616 0.733652102 4 8 50 1 1.041392685 0.181818182 0.25 0.454545455 8 0 0 11 3R:21371586-21371630 7 9 4075 FBgn0267651 33.88666667 1.706666667 2.616666667 0.265591186 5.2734375 3.439490446 5 5 5 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 3R 21527137 21527143 + 3R_21527137_21527143_+ 0.782911824 0.782911824 0.782911824 0 CG7956 FBtr0334664 21526920 21527691 3R + 21527097 21527147 3'utr CG7956 FlyBase G44556.1 TTATCTTTACAATAAATACCTAAGACTAGCATGTATTATTGTACAAAAAAA 8 21527135 0.974888575 3 8 56 1 0.954242509 0 0.125 0.222222222 8 0 0 9 3R:21527097-21527147 7 CG7956 FBtr0334664 21526920 21527691 GTACAAA 7mer-A1 dme-miR-305-5p 3R + 21527109 21527147 3'utr CG7956 FlyBase G33659.1 TAAATACCTAAGACTAGCATGTATTATTGTACAAAAAAA 5 21527133 0.98405328 5 5 33 1 0.698970004 0 0 0 5 0 0 5 3R:21527109-21527147 7 4.5 4076 FBgn0038890 1061.573333 33.39 51.31 0.004238991 0.134770889 0.087702202 2 4 3 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3R 21527808 21527814 + 3R_21527808_21527814_+ 0.521223855 0.521223855 0.521223855 0 CG7956 FBtr0301211 21527595 21528598 3R + 21527782 21527836 3'utr CG7956 FlyBase G44558.1 ATAATGTAGTTGATATACGCCATATTTGTGATTGTTATAGCACCAAGCTGTAGTG 48 21527814 0.590203976 7 46 452 0.981818182 1.431363764 0.072727273 0.125 0.236363636 48 0 1 54 3R:21527782-21527836 7 CG7956 FBtr0301211 21527595 21528598 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 21527793 21527858 3'utr CG7956 FlyBase G33660.1 GATATACGCCATATTTGTGATTGTTATAGCACCAAGCTGTAGTGAGTTTATAGATTTTTGGGCAAC 25 21527814 0.988218921 6 24 217 0.977777778 1.643452676 0.044444444 0.56 0.755555556 25 1 0 44 3R:21527793-21527858 7 34 4077 FBgn0038890 1061.573333 33.39 51.31 0.032027933 1.018268943 0.662638862 -6 -6 -6 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 3R 21570269 21570274 - 3R_21570269_21570274_- 1 1 1 0 InR FBtr0084121|FBtr0290232|FBtr0290230|FBtr0290231 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 3R - 21570242 21570298 3'utr InR FlyBase G53137.1 AAGCTAATTGTAAAAGTAATGCTAAGTTAATTGTTTCCTGTTTGTTTAAGCAAAAAA 6 21570267 0.989288599 3 5 56 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3R:21570242-21570298 6 InR FBtr0290230|FBtr0290231|FBtr0084121|FBtr0290232 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 AGTTAA 6mer3-8 dme-miR-999-3p 3R - 21570248 21570284 3'utr InR FlyBase G40134.1 AGTAATGCTAAGTTAATTGTTTCCTGTTTGTTTAAGC 6 21570268 0.720581899 3 6 62 1 1.041392685 0.272727273 0.333333333 0.636363636 6 0 0 11 3R:21570248-21570284 6 5.5 4078 FBgn0013984 3333.303333 37.67666667 58.15666667 0.001650015 0.145978944 0.094572133 -7 -6 -6.5 0.01 dme-miR-283-5p 7mer-m1 GATATTT 3R 21571009 21571015 - 3R_21571009_21571015_- 0.765586663 0.765586663 0.765586663 0 InR FBtr0084121|FBtr0290232|FBtr0290230|FBtr0290231 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 3R - 21570991 21571053 3'utr InR FlyBase G53140.1 ACTAGTGCTAATTATATAAACAAAACTGGGAAGCAAGCGATATTTACACTGAAAACTGAAGTA 34 21571011 0.85967824 9 31 168 0.868421053 1.217483944 0.105263158 0.088235294 0.184210526 34 4 1 33 3R:21570991-21571053 7 InR FBtr0290230|FBtr0290231|FBtr0084121|FBtr0290232 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 GATATTT 7mer-m1 dme-miR-283-5p 3R - 21570976 21571059 3'utr InR FlyBase G40141.1 AAAACAACTAGTGCTAATTATATAAACAAAACTGGGAAGCAAGCGATATTTACACTGAAAACTGAAGTAAAAACTACTAAAAAA 39 21571011 0.954712214 8 37 171 0.927272727 1.707570176 0.072727273 0.282051282 0.490909091 39 4 0 51 3R:21570976-21571059 7 32 4079 FBgn0013984 3333.303333 37.67666667 58.15666667 0.009600086 0.849332036 0.550237863 -4 -4 -4 0.01 dme-miR-2a-2-5p 6mer2-7 GATGAG 3R 21571114 21571119 - 3R_21571114_21571119_- 1 1 1 0 InR FBtr0084121|FBtr0290232|FBtr0290230|FBtr0290231 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 3R - 21571082 21571219 3'utr InR FlyBase G53141.1 TTGTTTTTATTTTATAGATGCAAAGCGAAAACAAGGAAACTAAATATTTAAATGAATTATACAAATTACTTAGATTGTAGTCAGATAGTAAGGAGAAGACGATGAGTCGAGAGATAGGTAGGAATCCTTGAACTAATT 34 21571117 0.930428465 13 28 165 0.785714286 1.041392685 0.261904762 0.176470588 0.333333333 34 7 2 33 3R:21571082-21571219 6 InR FBtr0290230|FBtr0290231|FBtr0084121|FBtr0290232 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 GATGAG 6mer2-7 dme-miR-2a-2-5p 3R - 21571085 21571238 3'utr InR FlyBase G40142.1 CACGCATGTGCTAGGTCTTTTGTTTTTATTTTATAGATGCAAAGCGAAAACAAGGAAACTAAATATTTAAATGAATTATACAAATTACTTAGATTGTAGTCAGATAGTAAGGAGAAGACGATGAGTCGAGAGATAGGTAGGAATCCTTGAACTA 25 21571117 0.974337027 18 23 147 0.933333333 1.447158031 0.233333333 0.16 0.3 25 2 0 28 3R:21571085-21571238 6 11 4080 FBgn0013984 3333.303333 37.67666667 58.15666667 0.00330003 0.291957887 0.189144265 -2 -2 -2 0.01 dme-miR-1012-3p 7mer-A1 TGACTAA 3R 21571281 21571287 - 3R_21571281_21571287_- 0.823349562 0.823349562 0.823349562 0 InR FBtr0084121|FBtr0290232|FBtr0290230|FBtr0290231 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 3R - 21571257 21571362 3'utr InR FlyBase G53142.1 ACAACAAAAGTATTCGATATTTGCCTTCGCTCTTTATATTATTATATATTTAACTATACAAACACATATATTTAATGACTAAATGAAAGCAAAGCAAAGCAAAGAA 53 21571279 0.979477025 7 51 209 0.970588235 1.51851394 0.014705882 0.20754717 0.382352941 53 1 1 66 3R:21571257-21571362 7 InR FBtr0290230|FBtr0290231|FBtr0084121|FBtr0290232 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 TGACTAA 7mer-A1 dme-miR-1012-3p 3R - 21571259 21571304 3'utr InR FlyBase G40143.1 CAAACACATATATTTAATGACTAAATGAAAGCAAAGCAAAGCAAAG 33 21571279 0.969058928 3 31 111 0.948717949 1.091080469 0.025641026 0.181818182 0.307692308 33 0 2 37 3R:21571259-21571304 7 39.5 4081 FBgn0013984 3333.303333 37.67666667 58.15666667 0.011850107 1.048394232 0.679199862 -8 -8 -8 0.01 dme-miR-283-5p 6mer3-8 TGATAT 3R 21571575 21571580 - 3R_21571575_21571580_- 1 1 1 0 InR FBtr0084121|FBtr0290232|FBtr0290230|FBtr0290231 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 3R - 21571509 21571603 3'utr InR FlyBase G53143.1 TACACATAATTAAGAACTGAACGTGATATGTTTGCTGAGTGTACTATCCTGACAGTTCTCCGATTTCTAGCAAAAGGAACGGAACCCAAAGTTCA 30 21571574 0.982380416 10 28 205 0.925 1.091080469 0.1 0.2 0.4 30 1 2 37 3R:21571509-21571603 6 InR FBtr0290230|FBtr0290231|FBtr0084121|FBtr0290232 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 TGATAT 6mer3-8 dme-miR-283-5p 3R - 21571544 21571597 3'utr InR FlyBase G40144.1 TAATTAAGAACTGAACGTGATATGTTTGCTGAGTGTACTATCCTGACAGTTCTC 27 21571575 0.985657883 6 22 181 0.820512821 0.903089987 0.282051282 0.333333333 0.538461538 27 4 3 32 3R:21571544-21571597 6 26 4082 FBgn0013984 3333.303333 37.67666667 58.15666667 0.00780007 0.690082279 0.447068264 -6 -5 -5.5 0.01 dme-miR-317-5p 6mer2-7 TATCCC 3R 21572267 21572272 - 3R_21572267_21572272_- 1 1 1 0 InR FBtr0084121|FBtr0290232|FBtr0290230|FBtr0290231 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 3R - 21572179 21572308 3'utr InR FlyBase G53147.1 ATGCATGTCGAAGAGCCTTGCAGTTTTAGCGCGTTTTATCCCCTGATTTTTAATTTATATTTACACCTACCATTATGTTAAGCAATTGGTAAGCATTGCTTGATTGTTCATACTTCACTTAAAATATCTT 73 21572271 0.800814006 21 69 667 0.942528736 1.913813852 0.149425287 0.191780822 0.32183908 73 5 0 82 3R:21572179-21572308 6 InR FBtr0290230|FBtr0290231|FBtr0084121|FBtr0290232 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 TATCCC 6mer2-7 dme-miR-317-5p 3R - 21572258 21572308 3'utr InR FlyBase G40150.1 ATGCATGTCGAAGAGCCTTGCAGTTTTAGCGCGTTTTATCCCCTGATTTTT 16 21572271 0.80689622 7 13 133 0.833333333 0.875061263 0.111111111 0.125 0.222222222 16 2 1 15 3R:21572258-21572308 6 12.5 4083 FBgn0013984 3333.303333 37.67666667 58.15666667 0.003750034 0.331770326 0.214936665 -1 -1 -1 0.01 dme-miR-7-5p 6mer3-8 GTCTTC 3R 21572393 21572398 - 3R_21572393_21572398_- 1 1 1 0 InR FBtr0084121|FBtr0290232|FBtr0290230|FBtr0290231 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 3R - 21572317 21572416 3'utr InR FlyBase G53148.1 AAAAACAAAACAGCAACTGTCTTCACTGAGTTAGCTAGCAATAGTTATAATTATCCAAACACCCGAACTACACGTAACTAGGTTTAAATGTTATTCAGCT 39 21572398 0.973760682 14 35 214 0.884615385 1.662757832 0 0.230769231 0.423076923 39 6 0 46 3R:21572317-21572416 6 InR FBtr0290230|FBtr0290231|FBtr0084121|FBtr0290232 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 GTCTTC 6mer3-8 dme-miR-7-5p 3R - 21572336 21572453 3'utr InR FlyBase G40151.1 GAAATAGATGAACTCTACAACAGCAAACAAGCAATACAAAAACAAAACAGCAACTGTCTTCACTGAGTTAGCTAGCAATAGTTATAATTATCCAAACACCCGAACTACACGTAACTAG 25 21572399 0.981590083 10 19 139 0.714285714 1.397940009 0.171428571 0.32 0.514285714 25 10 0 25 3R:21572336-21572453 6 18 4084 FBgn0013984 3333.303333 37.67666667 58.15666667 0.005400049 0.47774927 0.309508798 0 1 0.5 0.01 dme-miR-8-3p 6mer2-7 AGTATT 3R 21572798 21572803 - 3R_21572798_21572803_- 1 1 1 0 InR FBtr0084121|FBtr0290232|FBtr0290230|FBtr0290231 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 3R - 21572786 21572821 3'utr InR FlyBase G53151.1 ATGTTTACGTATTCGTTTAGTATTTACTCTACATTT 6 21572799 0.907974838 3 4 58 0.777777778 0.84509804 0.222222222 0.5 0.666666667 6 2 0 7 3R:21572786-21572821 6 InR FBtr0290230|FBtr0290231|FBtr0084121|FBtr0290232 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 AGTATT 6mer2-7 dme-miR-8-3p 3R - 21572757 21572850 3'utr InR FlyBase G40155.1 AATACCAATAGTTTCGATTAAGCCTATTTATGTTTACGTATTCGTTTAGTATTTACTCTACATTTTTTGTTTGTTTAAATTAATGCACTAGAGC 8 21572806 0.992650458 6 7 79 0.928571429 1.113943352 0 0.375 0.642857143 8 1 0 13 3R:21572757-21572850 6 4 4085 FBgn0013984 3333.303333 37.67666667 58.15666667 0.001200011 0.106166504 0.068779733 -4 3 -0.5 0.01 dme-miR-7-5p 6mer3-8 GTCTTC 3R 21573098 21573103 - 3R_21573098_21573103_- 1 1 1 0 InR FBtr0084121|FBtr0290232|FBtr0290230|FBtr0290231 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 3R - 21573058 21573118 3'utr InR FlyBase G53154.1 AAGCACATTGTGTCAGTCTTCGTAAAATAACACACCTTTCCGTAGATGGATGACACCTTTT 5 21573111 0.983145726 2 5 38 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:21573058-21573118 6 InR FBtr0290230|FBtr0290231|FBtr0084121|FBtr0290232 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 GTCTTC 6mer3-8 dme-miR-7-5p 3R - 21573094 21573146 3'utr InR FlyBase G40157.1 AGTTAAAATTTTGCATTAATAGAAAATTAAGCACATTGTGTCAGTCTTCGTAA 11 21573110 0.736659097 7 10 79 1 1.278753601 0.210526316 0.636363636 0.789473684 11 0 0 19 3R:21573094-21573146 6 5.5 4086 FBgn0013984 3333.303333 37.67666667 58.15666667 0.001650015 0.145978944 0.094572133 8 7 7.5 0.01 dme-miR-965-3p 7mer-A1 ACGCTTA 3R 21786170 21786176 - 3R_21786170_21786176_- 0.800930333 0.823348952 0.812139643 0.015852415 CASK FBtr0084162|FBtr0112873|FBtr0301327|FBtr0301328|FBtr0084161|FBtr0330368|FBtr0112872 21785760|21785760|21783398|21785760|21785760|21785760|21785760 21786682|21786682|21786682|21786682|21786682|21786589|21786682 3R - 21786109 21786210 3'utr CASK FlyBase G53257.1 TGTTTTATTCAGCATTTAGTCAAAACAGCATTAAACGCTTATGTAAATCTTGCACTTGTTAGTGTCTAAGTTAAATGGAGTTAGACAAATCGAAACTGAAGC 37 21786153 0.987016403 15 35 297 0.955555556 1.633468456 0.111111111 0.216216216 0.355555556 37 2 0 43 3R:21786109-21786210 7 CASK FBtr0301328|FBtr0084161|FBtr0330368|FBtr0112872|FBtr0084162|FBtr0112873|FBtr0301327 21785760|21785760|21785760|21785760|21785760|21785760|21783398 21786682|21786682|21786589|21786682|21786682|21786682|21786682 ACGCTTA 7mer-A1 dme-miR-965-3p 3R - 21786125 21786226 3'utr CASK FlyBase G40239.1 ATTGTTTTGTTGTATTTGTTTTATTCAGCATTTAGTCAAAACAGCATTAAACGCTTATGTAAATCTTGCACTTGTTAGTGTCTAAGTTAAATGGAGTTAGAC 24 21786179 0.984813899 14 23 189 0.96875 1.491361694 0.0625 0.291666667 0.46875 24 1 0 31 3R:21786125-21786226 7 16 4087 FBgn0013759 1781.206667 49.49333333 75.88666667 0.008982675 0.323275862 0.210840727 -23 3 -10 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3R 21786240 21786245 - 3R_21786240_21786245_- 1 0.99999618 0.99999809 2.69E-06 CASK FBtr0084162|FBtr0112873|FBtr0301327|FBtr0301328|FBtr0084161|FBtr0330368|FBtr0112872 21785760|21785760|21783398|21785760|21785760|21785760|21785760 21786682|21786682|21786682|21786682|21786682|21786589|21786682 3R - 21786224 21786278 3'utr CASK FlyBase G53258.1 TTTAATCGATTGTATTTGCCATTCCATGCTCAATGTGTTATATTTTACGATTATT 9 21786245 0.891542328 5 8 82 1 1.146128036 0.357142857 0.333333333 0.571428571 9 0 0 14 3R:21786224-21786278 6 CASK FBtr0301328|FBtr0084161|FBtr0330368|FBtr0112872|FBtr0084162|FBtr0112873|FBtr0301327 21785760|21785760|21785760|21785760|21785760|21785760|21783398 21786682|21786682|21786589|21786682|21786682|21786682|21786682 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 21786232 21786275 3'utr CASK FlyBase G40240.1 AATCGATTGTATTTGCCATTCCATGCTCAATGTGTTATATTTTA 14 21786245 0.723780237 4 13 136 0.875 1.322219295 0.125 0.571428571 0.75 14 3 0 21 3R:21786232-21786275 6 8.5 4088 FBgn0013759 1781.206667 49.49333333 75.88666667 0.004772046 0.171740302 0.112009136 0 0 0 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 21850858 21850863 - 3R_21850858_21850863_- 0.999996233 1 0.999998116 2.69E-06 glec FBtr0084157 21850692 21851709 3R - 21850809 21850874 3'utr glec FlyBase G53270.1 TATTTTGAACAACCAAACTGTGTATATTGTACGGAGTGTAACCAAACTCCAAGCAGCTAAATGCGA 18 21850848 0.983646437 6 16 116 0.826086957 1.278753601 0.130434783 0.277777778 0.434782609 18 4 0 19 3R:21850809-21850874 6 glec FBtr0084157 21850692 21851709 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 21850837 21850872 3'utr glec FlyBase G40252.1 TTTTGAACAACCAAACTGTGTATATTGTACGGAGTG 6 21850850 0.958654932 5 6 34 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 3R:21850837-21850872 6 11 4089 FBgn0015229 300 18.05666667 27.87 0.036666667 0.60919328 0.39468963 -15 -13 -14 0.01 dme-bantam-3p 8mer-A1 TGATCTCA 3R 21851167 21851174 - 3R_21851167_21851174_- 0.631136385 0.631136385 0.631136385 0 glec FBtr0084157 21850692 21851709 3R - 21851137 21851363 3'utr glec FlyBase G53271.1 GATATCGGTCTTATAATGGAAATTATTAAGTTAATGGATATGTGCTAATGTTAGACAAGCGATCGACAGCGCCATGCATCCACTATATATAGACTAAACCCCAACCCAAACCAATTCAAGCGTTCTCAGCGTGTTTTCGGGTCCAGATGCACGCGTGTGCCAAAAGTATTTACAATTTACTTTGTGTCATGATCTCAATTATTAAAAACAATTTTATTATTTTGTTT 358 21851174 0.987084384 40 342 2981 0.971365639 2.042378598 0.167400881 0.198879552 0.370044053 357 10 3 441 3R:21851137-21851363 8 glec FBtr0084157 21850692 21851709 TGATCTCA 8mer-A1 dme-bantam-3p 3R - 21851154 21851329 3'utr glec FlyBase G40253.1 TGGATATGTGCTAATGTTAGACAAGCGATCGACAGCGCCATGCATCCACTATATATAGACTAAACCCCAACCCAAACCAATTCAAGCGTTCTCAGCGTGTTTTCGGGTCCAGATGCACGCGTGTGCCAAAAGTATTTACAATTTACTTTGTGTCATGATCTCAATTATTAAAAACA 230 21851174 0.897124119 29 221 1929 0.962427746 2.045322979 0.161849711 0.382608696 0.589595376 230 11 2 333 3R:21851154-21851329 8 205.5 4090 FBgn0015229 300 18.05666667 27.87 0.685 11.3808381 7.373519914 0 0 0 0.01 dme-miR-92b-3p 7mer-A1 TGCAATA 3R 21851655 21851661 - 3R_21851655_21851661_- 0.782911824 0.762244259 0.772578042 0.014614129 glec FBtr0084157 21850692 21851709 3R - 21851623 21851696 3'utr glec FlyBase G53273.1 TGACGATGACAAATAGCCCCTGGCGGAGCAATAATTGCAATATATGATATTAATTGTAAATGTAATTTTAATTT 24 21851656 0.858994323 8 23 158 0.964285714 1.431363764 0.142857143 0.125 0.25 24 1 0 27 3R:21851623-21851696 7 glec FBtr0084157 21850692 21851709 TGCAATA 7mer-A1 dme-miR-92b-3p 3R - 21851624 21851696 3'utr glec FlyBase G40256.1 TGACGATGACAAATAGCCCCTGGCGGAGCAATAATTGCAATATATGATATTAATTGTAAATGTAATTTTAATT 18 21851664 0.931655859 10 18 110 1 1.51851394 0.121212121 0.555555556 0.757575758 18 0 0 33 3R:21851624-21851696 7 13.5 4091 FBgn0015229 300 18.05666667 27.87 0.045 0.747646299 0.484391819 -5 3 -1 0.01 dme-miR-1008-3p 8mer-A1 AGCTGTGA 3R 22016456 22016463 - 3R_22016456_22016463_- 0.643565469 0.643565469 0.643565469 0 CG6439 FBtr0084190 22016389 22016987 3R - 22016450 22016491 3'utr CG6439 FlyBase G53277.1 ATGGCTTTGAGTGGACCCACTCCACTGGAGCTGTGAGAAAGA 7 22016466 0.862281452 3 7 43 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3R:22016450-22016491 8 CG6439 FBtr0084190 22016389 22016987 AGCTGTGA 8mer-A1 dme-miR-1008-3p 3R - 22016451 22016484 3'utr CG6439 FlyBase G40259.1 TGAGTGGACCCACTCCACTGGAGCTGTGAGAAAG 5 22016466 0.930631675 3 5 18 1 0.903089987 0.125 0.4 0.625 5 0 0 8 3R:22016451-22016484 8 6 4092 FBgn0038922 288 18.82 28.82333333 0.020833333 0.318809777 0.208164681 3 3 3 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3R 22029354 22029359 + 3R_22029354_22029359_+ 1 1 1 0 ND42 FBtr0084172|FBtr0084173|FBtr0335194 22029310|22029310|22029310 22029393|22029393|22029393 3R + 22029317 22029366 3'utr ND42 FlyBase G44578.1 TTTTGCTATGCTTTCGAGTTGAAATCACCTGGCGAAATGTGTTAATTATC 12 22029335 0.810499307 4 11 95 0.842105263 0.602059991 0.105263158 0.416666667 0.631578947 12 0 3 16 3R:22029317-22029366 6 ND42 FBtr0084172|FBtr0084173|FBtr0335194 22029310|22029310|22029310 22029393|22029393|22029393 TGTGTT 6mer3-8 dme-miR-317-3p 3R + 22029311 22029372 3'utr ND42 FlyBase G33675.1 GAGGGTTTTTGCTATGCTTTCGAGTTGAAATCACCTGGCGAAATGTGTTAATTATCTAATAA 12 22029362 0.987103162 5 10 92 0.947368421 1.255272505 0.157894737 0.416666667 0.631578947 12 1 0 18 3R:22029311-22029372 6 7.5 4093 FBgn0019957 272.6666667 23.35333333 35.85333333 0.027506112 0.321153297 0.209185571 19 -8 5.5 0.01 dme-miR-184-5p 8mer-A1 TGATAAGA 3R 22077747 22077754 + 3R_22077747_22077754_+ 0.601217767 0.601217767 0.601217767 0 how FBtr0301402|FBtr0335195|FBtr0301401|FBtr0084177 22074557|22074557|22074557|22074557 22078463|22079321|22079321|22079321 3R + 22077727 22077758 3'utr how FlyBase G44601.1 AAGGCAATTAAGCAAACGATTGATAAGAGAAT 5 22077746 0.889513448 2 4 14 1 0.698970004 0 0 0 5 0 0 5 3R:22077727-22077758 8 how FBtr0301401|FBtr0084177|FBtr0301402|FBtr0335195 22074557|22074557|22074557|22074557 22079321|22079321|22078463|22079321 TGATAAGA 8mer-A1 dme-miR-184-5p 3R + 22077727 22077759 3'utr how FlyBase G33689.1 AAGGCAATTAAGCAAACGATTGATAAGAGAATC 5 22077746 0.876565913 2 5 15 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:22077727-22077759 8 4.5 4094 FBgn0264491 669.8 25.87 39.62333333 0.006718423 0.173946656 0.113569446 1 1 1 0.01 dme-miR-33-5p 7mer-A1 AATGCAA 3R 22077848 22077854 + 3R_22077848_22077854_+ 0.782911824 0.782911824 0.782911824 0 how FBtr0301402|FBtr0335195|FBtr0301401|FBtr0084177 22074557|22074557|22074557|22074557 22078463|22079321|22079321|22079321 3R + 22077824 22077860 3'utr how FlyBase G44602.1 AGTTCAACGAACAAAAACATACTTAATGCAAGCATAT 31 22077846 0.664302466 3 31 124 1 1.531478917 0 0.096774194 0.176470588 31 0 0 34 3R:22077824-22077860 7 how FBtr0301401|FBtr0084177|FBtr0301402|FBtr0335195 22074557|22074557|22074557|22074557 22079321|22079321|22078463|22079321 AATGCAA 7mer-A1 dme-miR-33-5p 3R + 22077803 22077873 3'utr how FlyBase G33690.1 CAAGTTAGTTCTTAGTGTAAAAGTTCAACGAACAAAAACATACTTAATGCAAGCATATACATATATATATA 17 22077846 0.962764322 4 15 85 0.9 0.954242509 0 0.470588235 0.7 17 1 2 27 3R:22077803-22077873 7 23 4095 FBgn0264491 669.8 25.87 39.62333333 0.034338609 0.889060688 0.580466055 2 2 2 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 3R 22360079 22360084 + 3R_22360079_22360084_+ 1 0.999999971 0.999999985 0 Sar1 FBtr0084208|FBtr0084206|FBtr0084210|FBtr0084209 22359952|22359952|22359952|22359952 22360711|22360711|22360711|22360711 3R + 22360074 22360157 3'utr Sar1 FlyBase G44620.1 AAGGGATGTGAACCCAGCCCAATTCAAACCGTCAGACCTTAAGCAAAACGAAGCTGCGTGCGCAATTTCTAATTTATACAAAAC 14 22360096 0.95990601 10 12 57 0.933333333 1.146128036 0.2 0.071428571 0.133333333 14 1 0 14 3R:22360074-22360157 6 Sar1 FBtr0084208|FBtr0084206|FBtr0084210|FBtr0084209 22359952|22359952|22359952|22359952 22360711|22360711|22360711|22360711 ATGTGA 6mer3-8 dme-miR-1003-3p 3R + 22360075 22360121 3'utr Sar1 FlyBase G33705.1 AGGGATGTGAACCCAGCCCAATTCAAACCGTCAGACCTTAAGCAAAA 7 22360096 0.908283051 3 6 18 1 1 0 0.5 0.7 6 0 0 10 3R:22360075-22360121 6 2 4096 FBgn0038947 2062.363333 171.4866667 261.99 0.000969761 0.011662714 0.007633879 -17 -17 -17 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 3R 22360399 22360404 + 3R_22360399_22360404_+ 0.999769865 0.998758626 0.999264246 0.000715097 Sar1 FBtr0084208|FBtr0084206|FBtr0084210|FBtr0084209 22359952|22359952|22359952|22359952 22360711|22360711|22360711|22360711 3R + 22360361 22360399 3'utr Sar1 FlyBase G44621.1 ACAAATTATAGCAAATTAAAGGTGATTTATTTAAGAGCA 87 22360387 0.655975754 6 85 693 0.971153846 1.402261382 0.173076923 0.195402299 0.326923077 87 0 3 101 3R:22360361-22360399 1 Sar1 FBtr0084208|FBtr0084206|FBtr0084210|FBtr0084209 22359952|22359952|22359952|22359952 22360711|22360711|22360711|22360711 ATGTGC 6mer3-8 dme-miR-305-3p 3R + 22360363 22360400 3'utr Sar1 FlyBase G33706.1 AAATTATAGCAAATTAAAGGTGATTTATTTAAGAGCAT 63 22360387 0.659373206 5 61 504 0.977272727 1.934498451 0.193181818 0.349206349 0.534090909 63 2 0 86 3R:22360363-22360400 2 2.5 4097 FBgn0038947 2062.363333 171.4866667 261.99 0.001212202 0.014578393 0.009542349 12 12 12 0.01 dme-miR-33-5p 7mer-A1 AATGCAA 3R 22360809 22360815 - 3R_22360809_22360815_- 0.782911824 0.782911824 0.782911824 0 PSR FBtr0084239|FBtr0330378 22360780|22360780 22361068|22360969 3R - 22360806 22360900 3'utr PSR FlyBase G53315.1 CCTGGATCCCGTGCTCGCCCTCATCGAATGCCTGCTCCCTGATTTCAATAGATGCTCCGGACGTGACTCATTAGCGTAAACCCTAAATGCAAATA 65 22360830 0.977257877 13 63 411 0.970149254 1.511883361 0.134328358 0.030769231 0.059701493 65 1 1 65 3R:22360806-22360900 7 PSR FBtr0084239|FBtr0330378 22360780|22360780 22361068|22360969 AATGCAA 7mer-A1 dme-miR-33-5p 3R - 22360787 22360922 3'utr PSR FlyBase G40283.1 TTGGACCAGCATGTTTGCAGCTCCTGGATCCCGTGCTCGCCCTCATCGAATGCCTGCTCCCTGATTTCAATAGATGCTCCGGACGTGACTCATTAGCGTAAACCCTAAATGCAAATAAATAAATGAATCCAATATG 55 22360830 0.975404141 18 54 339 0.988764045 1.944482672 0.146067416 0.418181818 0.640449438 55 1 0 88 3R:22360787-22360922 7 2.5 4098 FBgn0038948 200.6666667 15.35666667 23.41666667 0.012458472 0.162795746 0.106761566 15 15 15 0.01 dme-miR-1012-3p 7mer-m8 TTGACTA 3R 22364500 22364506 + 3R_22364500_22364506_+ 0.631525999 0.631525999 0.631525999 0 Muted FBtr0110878|FBtr0344526 22363523|22363523 22364580|22364580 3R + 22364474 22364535 stop_codon Muted FlyBase G44628.1 TCAAGTCCAGACATTGAAACCCCATGTTGACTAGATAGATGATCTGCGAGTAAAAATCGTTC 8 22364513 0.977173596 2 7 51 1 1.079181246 0 0.375 0.583333333 8 0 0 12 3R:22364474-22364535 7 Muted FBtr0344526|FBtr0110878 22363523|22363523 22364580|22364580 TTGACTA 7mer-m8 dme-miR-1012-3p 3R + 22364466 22364524 stop_codon Muted FlyBase G33710.1 GAGGGAAGTCAAGTCCAGACATTGAAACCCCATGTTGACTAGATAGATGATCTGCGAGT 9 22364513 0.957884778 5 9 44 1 1.113943352 0.153846154 0.444444444 0.615384615 9 0 0 13 3R:22364466-22364524 7 7 4099 FBgn0083967 164.1666667 13.59 20.94666667 0.042639594 0.515084621 0.33418205 -13 -13 -13 0.01 dme-miR-980-3p 6mer2-7 GCAGCT 3R 22372514 22372519 + 3R_22372514_22372519_+ 1 0.999999904 0.999999952 7.07E-08 PyK FBtr0084213|FBtr0084214 22372480|22372480 22372746|22372746 3R + 22372472 22372621 stop_codon PyK FlyBase G44639.1 CGTCGAATAAATTCTGCCGCTCAGGAAGTACCTGGATGCGTCGCAGCTGCCGCGGGCGTCGCGTTGATTACTGTTAATAACCAAGTTAATTTATTAATTACACAATATTCGGAATATTGGAAACTGCAGGAGGCTGCTGGAACCGCTGTC 68 22372507 0.824475925 20 56 358 0.820512821 1.329058719 0.371794872 0.147058824 0.256410256 68 12 2 64 3R:22372472-22372621 6 PyK FBtr0084213|FBtr0084214 22372480|22372480 22372746|22372746 GCAGCT 6mer2-7 dme-miR-980-3p 3R + 22372479 22372553 stop_codon PyK FlyBase G33723.1 TAAATTCTGCCGCTCAGGAAGTACCTGGATGCGTCGCAGCTGCCGCGGGCGTCGCGTTGATTACTGTTAATAACC 34 22372519 0.882833144 10 33 171 0.977777778 1.643452676 0.333333333 0.294117647 0.466666667 34 1 0 44 3R:22372479-22372553 6 29.5 4100 FBgn0267385 2164.02 133.4933333 203.1566667 0.013632037 0.220984818 0.145208132 7 -5 1 0.01 dme-miR-184-3p 7mer-m8 TCCGTCC 3R 22418799 22418805 + 3R_22418799_22418805_+ 0.661615243 0.661615243 0.661615243 0 lqfR FBtr0299515 22418577 22419051 3R + 22418774 22418829 3'utr lqfR FlyBase G44679.1 CCGGATCAAACCCATTAATTCCACATCCGTCCTGATCGTCCACTCGGAATTTGAAA 51 22418806 0.968644362 7 46 328 0.918032787 1.447158031 0.180327869 0.117647059 0.262295082 51 4 1 56 3R:22418774-22418829 7 lqfR FBtr0299515 22418577 22419051 TCCGTCC 7mer-m8 dme-miR-184-3p 3R + 22418788 22418826 3'utr lqfR FlyBase G33751.1 TTAATTCCACATCCGTCCTGATCGTCCACTCGGAATTTG 24 22418806 0.713692323 4 21 148 0.842105263 1.505149978 0.131578947 0.458333333 0.657894737 24 6 0 32 3R:22418788-22418826 7 37 4101 FBgn0261279 676.23 25.48666667 39.00333333 0.054715112 1.451739472 0.948636869 -7 -7 -7 0.01 dme-miR-11-3p 7mer-m1 TGTGATG 3R 22422748 22422754 + 3R_22422748_22422754_+ 0.612071121 0.612071121 0.612071121 0 mats FBtr0084229|FBtr0345205|FBtr0337044 22422673|22422673|22422673 22422846|22422846|22423302 3R + 22422674 22422802 3'utr mats FlyBase G44686.1 GGAATCACTGCATGGAGCCGCGAATTTTCGCGATTCCGGCGGCGGTGGTGGTGGTCTGCGCTTGCAGTTGGACTTGTGATGAAAGCGCTCTGGCAGACTCGTGTATTACGCTTTAGTTAGTTACCGCCA 98 22422747 0.97055308 19 92 744 0.928571429 1.539912085 0.303571429 0.12244898 0.232142857 98 6 2 104 3R:22422674-22422802 7 mats FBtr0084229|FBtr0345205|FBtr0337044 22422673|22422673|22422673 22422846|22422846|22423302 TGTGATG 7mer-m1 dme-miR-11-3p 3R + 22422700 22422795 3'utr mats FlyBase G33759.1 TTCGCGATTCCGGCGGCGGTGGTGGTGGTCTGCGCTTGCAGTTGGACTTGTGATGAAAGCGCTCTGGCAGACTCGTGTATTACGCTTTAGTTAGTT 78 22422747 0.779046785 15 74 549 0.937007874 1.598425707 0.417322835 0.41025641 0.637795276 78 6 2 119 3R:22422700-22422795 7 63.5 4102 FBgn0038965 132.6666667 9.696666667 14.72333333 0.478643216 6.548642145 4.312882047 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 22460604 22460610 + 3R_22460604_22460610_+ 0.823349562 0.823349562 0.823349562 0 CG34376 FBtr0112609 22460499 22460749 3R + 22460515 22460626 3'utr CG34376 FlyBase G44706.1 AAATAGCAGGTCAAATGACAGTTAAGTACAAAAGTGGAATGATTGCAATAATACTCAAATACACTAAAGACGGCGTAACCAAAACAATTCCAAAGAATTTAGTTAATACATA 54 22460602 0.889745512 6 53 297 0.983050847 1.462397998 0.06779661 0.074074074 0.152542373 54 0 1 58 3R:22460515-22460626 7 CG34376 FBtr0112609 22460499 22460749 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 22460567 22460630 3'utr CG34376 FlyBase G33775.1 ACTCAAATACACTAAAGACGGCGTAACCAAAACAATTCCAAAGAATTTAGTTAATACATAATAA 24 22460602 0.969706051 2 23 129 0.974358974 1.579783597 0 0.5 0.692307692 24 1 0 38 3R:22460567-22460630 7 31.5 4103 FBgn0085405 134.82 6.636666667 10.25333333 0.23364486 4.746358614 3.072171651 2 2 2 0.01 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 22460697 22460704 + 3R_22460697_22460704_+ 0.625364009 0.625364009 0.625364009 0 CG34376 FBtr0112609 22460499 22460749 3R + 22460672 22460727 3'utr CG34376 FlyBase G44707.1 TCGTTTTTATTATTGTACGTTGCATTAGCTTTACACTGTAATAAATGTTGAATTTG 13 22460696 0.913471599 2 11 128 0.882352941 0.698970004 0.588235294 0.230769231 0.411764706 13 0 2 15 3R:22460672-22460727 8 CG34376 FBtr0112609 22460499 22460749 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R + 22460670 22460712 3'utr CG34376 FlyBase G33776.1 TATCGTTTTTATTATTGTACGTTGCATTAGCTTTACACTGTAA 10 22460696 0.98369017 2 10 82 1 1.079181246 0.333333333 0.2 0.333333333 10 0 0 12 3R:22460670-22460712 8 10.5 4104 FBgn0085405 134.82 6.636666667 10.25333333 0.07788162 1.582119538 1.024057217 1 1 1 0.01 dme-miR-1006-3p 7mer-A1 GAATTTA 3R 22464083 22464089 + 3R_22464083_22464089_+ 0.823349562 0.823349562 0.823349562 0 AP-2mu FBtr0084253|FBtr0301866|FBtr0084252 22464039|22464039|22464039 22464603|22464603|22464603 3R + 22464068 22464106 5'utr AP-2mu FlyBase G44715.1 AAGATTATCACAATTGAATTTAACGAGATGAATGGAGAA 6 22464082 0.727082637 3 4 36 0.875 0.84509804 0.25 0.333333333 0.5 6 1 0 7 3R:22464068-22464106 7 AP-2mu FBtr0301866|FBtr0084252|FBtr0084253 22464039|22464039|22464039 22464603|22464603|22464603 GAATTTA 7mer-A1 dme-miR-1006-3p 3R + 22464048 22464098 5'utr AP-2mu FlyBase G33781.1 AAGCATCCCCATCACGGAGCAAGATTATCACAATTGAATTTAACGAGATGA 6 22464072 0.965656417 4 6 31 1 1.041392685 0.090909091 0.5 0.727272727 6 0 0 11 3R:22464048-22464098 7 5 4105 FBgn0263351 730.8 44.74666667 67.98333333 0.006841817 0.111740167 0.073547438 1 11 6 0.01 dme-miR-283-5p 7mer-m8 TGATATT 3R 22464543 22464549 + 3R_22464543_22464549_+ 0.620203677 0.620203677 0.620203677 0 AP-2mu FBtr0084253|FBtr0301866|FBtr0084252 22464039|22464039|22464039 22464603|22464603|22464603 3R + 22464523 22464597 3'utr AP-2mu FlyBase G44719.1 TCTGTCAGCGCTATCAATATTGATATTCAAGTGTTAATAATATTCGAATTGTTTAATAAATAAATTAGCATGATA 29 22464542 0.974462635 3 27 254 0.942857143 1.51851394 0.457142857 0.206896552 0.342857143 29 2 0 33 3R:22464523-22464597 7 AP-2mu FBtr0301866|FBtr0084252|FBtr0084253 22464039|22464039|22464039 22464603|22464603|22464603 TGATATT 7mer-m8 dme-miR-283-5p 3R + 22464513 22464561 3'utr AP-2mu FlyBase G33784.2 AGACCAAAACTCTGTCAGCGCTATCAATATTGATATTCAAGTGTTAATA 15 22464542 0.747257157 5 13 125 0.956521739 1.342422681 0.304347826 0.4 0.608695652 15 1 0 22 3R:22464513-22464561 7 19.5 4106 FBgn0263351 730.8 44.74666667 67.98333333 0.026683087 0.435786651 0.286835009 1 1 1 0.01 dme-miR-33-5p 6mer3-8 CAATGC 3R 22607660 22607665 + 3R_22607660_22607665_+ 1 1 1 0 Efa6 FBtr0334560|FBtr0113396|FBtr0113395|FBtr0302187|FBtr0334559 22605937|22607217|22607217|22606893|22607217 22608471|22608471|22608471|22608842|22608471 3R + 22607609 22607714 3'utr Efa6 FlyBase G44763.1 AAACCCCATCAGGGGTTGCGAGAAAGAGATCATTTGAGACAATTAGACTACCAATGCGATAATTAACGAGGGAGAATTTTACGTTTAAAGGTCGTTCATCAGAAGA 242 22607651 0.975231158 14 226 1414 0.940766551 2.130333768 0.135888502 0.144628099 0.278745645 242 16 1 270 3R:22607609-22607714 6 Efa6 FBtr0113396|FBtr0113395|FBtr0302187|FBtr0334559|FBtr0334560 22607217|22607217|22606893|22607217|22605937 22608471|22608471|22608842|22608471|22608471 CAATGC 6mer3-8 dme-miR-33-5p 3R + 22607609 22607713 3'utr Efa6 FlyBase G33818.1 AAACCCCATCAGGGGTTGCGAGAAAGAGATCATTTGAGACAATTAGACTACCAATGCGATAATTAACGAGGGAGAATTTTACGTTTAAAGGTCGTTCATCAGAAG 141 22607651 0.977317959 15 125 816 0.872727273 1.505149978 0.2 0.397163121 0.613636364 141 23 5 192 3R:22607609-22607713 6 141 4107 FBgn0051158 976.3733333 19.19333333 29.44333333 0.144411974 7.346300799 4.788859957 9 9 9 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 3R 22607969 22607974 + 3R_22607969_22607974_+ 0.612267695 0.612197568 0.612232632 4.96E-05 Efa6 FBtr0334560|FBtr0334560|FBtr0113396|FBtr0113396|FBtr0113395|FBtr0113395|FBtr0302187|FBtr0302187|FBtr0334559|FBtr0334559 22605937|22605937|22607217|22607217|22607217|22607217|22606893|22606893|22607217|22607217 22608471|22608471|22608471|22608471|22608471|22608471|22608842|22608842|22608471|22608471 3R + 22607862 22608007 3'utr Efa6 FlyBase G44765.1 TATCGTTCATATTTGCTCCGCCAAAGATTCTGCTGGACGGCTGTTTAGGAACGAGAATGAAAACTGCTTATACACATAGACTTATTATTACAAGAGTTGATAAACAATACTTACATCATTACCTATGCTATCATTATAAATGATAA 234 22607980 0.891425755 19 227 1812 0.971153846 1.879382637 0.022435897 0.243589744 0.432692308 234 6 3 303 3R:22607862-22608007 6 Efa6 FBtr0113396|FBtr0113396|FBtr0113395|FBtr0113395|FBtr0302187|FBtr0302187|FBtr0334559|FBtr0334559|FBtr0334560|FBtr0334560 22607217|22607217|22607217|22607217|22606893|22606893|22607217|22607217|22605937|22605937 22608471|22608471|22608471|22608471|22608842|22608842|22608471|22608471|22608471|22608471 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 3R + 22607967 22608007 3'utr Efa6 FlyBase G33820.1 AATACTTACATCATTACCTATGCTATCATTATAAATGATAA 46 22607980 0.736390315 4 43 416 0.935064935 1.255272505 0 0.456521739 0.675324675 46 2 3 72 3R:22607967-22608007 6 71 4108 FBgn0051158 976.3733333 19.19333333 29.44333333 0.072718086 3.699201111 2.411411751 -11 -11 -11 0.01 dme-miR-932-5p 7mer-A1 GAATTGA 3R 22608087 22608093 + 3R_22608087_22608093_+ 0.823349562 0.823349562 0.823349562 0 Efa6 FBtr0334560|FBtr0113396|FBtr0113395|FBtr0302187|FBtr0334559 22605937|22607217|22607217|22606893|22607217 22608471|22608471|22608471|22608842|22608471 3R + 22608024 22608122 3'utr Efa6 FlyBase G44766.1 AATGAACAATATCTCTACACAACCACAAGATGGAGAACATCGGCAGTAACAATAACGAAATGAGAATTGAGAAGAGGACAAGCGCATTAGCATTAAGCT 23 22608090 0.749156598 9 22 62 1 1.431363764 0.222222222 0.130434783 0.259259259 23 0 0 27 3R:22608024-22608122 7 Efa6 FBtr0113396|FBtr0113395|FBtr0302187|FBtr0334559|FBtr0334560 22607217|22607217|22606893|22607217|22605937 22608471|22608471|22608842|22608471|22608471 GAATTGA 7mer-A1 dme-miR-932-5p 3R + 22608076 22608107 3'utr Efa6 FlyBase G33821.1 TAACGAAATGAGAATTGAGAAGAGGACAAGCG 6 22608090 0.796929093 3 6 13 1 1 0.8 0.5 0.7 6 0 0 10 3R:22608076-22608107 7 8 4109 FBgn0051158 976.3733333 19.19333333 29.44333333 0.008193587 0.416811393 0.271708366 -3 -3 -3 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 3R 22608670 22608675 + 3R_22608670_22608675_+ 1 1 1 0 Efa6 FBtr0302187 22606893 22608842 3R + 22608632 22608719 3'utr Efa6 FlyBase G44769.1 AGGGAAACAAGAAGACGAACGTGGAGACGGTGATTTTTATGTGAACATTTATTACTAACTGATAAGCTTTGATTAAACTTAGGAAAGC 25 22608666 0.982650419 7 24 180 0.939393939 1.491361694 0 0.2 0.393939394 25 2 0 31 3R:22608632-22608719 6 Efa6 FBtr0302187 22606893 22608842 ATGTGA 6mer3-8 dme-miR-1003-3p 3R + 22608641 22608681 3'utr Efa6 FlyBase G33823.1 AGAAGACGAACGTGGAGACGGTGATTTTTATGTGAACATTT 15 22608667 0.902985717 4 15 101 1 1.278753601 0 0.266666667 0.421052632 15 0 0 19 3R:22608641-22608681 6 5 4110 FBgn0051158 976.3733333 19.19333333 29.44333333 0.005120992 0.260507121 0.169817729 4 3 3.5 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 3R 22681901 22681907 + 3R_22681901_22681907_+ 0.823349562 0.823349562 0.823349562 0 wake FBtr0344409|FBtr0344403|FBtr0344405|FBtr0344407|FBtr0344408|FBtr0344406|FBtr0344404 22681578|22681578|22681578|22681578|22681578|22681578|22681578 22682176|22682176|22683827|22682176|22682176|22682176|22682176 3R + 22681880 22681923 3'utr wake FlyBase G44782.1 TCGTTGACCAATTCCAGAATTAGACTGAATTACTTATGTATGCT 170 22681899 0.842890564 7 166 1175 0.971962617 2.318063335 0.08411215 0.223529412 0.38317757 170 6 0 208 3R:22681880-22681923 7 wake FBtr0344408|FBtr0344406|FBtr0344404|FBtr0344409|FBtr0344403|FBtr0344405|FBtr0344407 22681578|22681578|22681578|22681578|22681578|22681578|22681578 22682176|22682176|22682176|22682176|22682176|22683827|22682176 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 22681879 22681941 3'utr wake FlyBase G33830.1 ATCGTTGACCAATTCCAGAATTAGACTGAATTACTTATGTATGCTGCAATGGCAAACTGATGA 104 22681899 0.980325128 7 101 715 0.981012658 1.889301703 0.139240506 0.375 0.588607595 104 2 1 155 3R:22681879-22681941 7 135.5 4111 FBgn0266418 402.2066667 8.453333333 12.89666667 0.336891482 16.02917981 10.50659085 2 2 2 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3R 22710975 22710980 - 3R_22710975_22710980_- 1 1 1 0 wge FBtr0310427|FBtr0310426 22710881|22710881 22711715|22711715 3R - 22710971 22711084 3'utr wge FlyBase G53471.1 TATAAATGTAACAATTCAATGTGATAGCAAAACAAAACCAGATGTTGATGTGTACAGAGGAGAGAATAAGTATAGATGATAAATAAGAGATCAAGCAGAATGTGTGTGTTGAAT 37 22710982 0.880243704 12 34 212 0.906976744 1.290034611 0.11627907 0.135135135 0.255813953 37 3 1 39 3R:22710971-22711084 6 wge FBtr0310426|FBtr0310427 22710881|22710881 22711715|22711715 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 22710966 22711045 3'utr wge FlyBase G40411.1 AGATGTTGATGTGTACAGAGGAGAGAATAAGTATAGATGATAAATAAGAGATCAAGCAGAATGTGTGTGTTGAATATTTA 13 22710979 0.805787125 8 13 78 1 1.342422681 0.136363636 0.461538462 0.681818182 13 0 0 22 3R:22710966-22711045 6 6.5 4112 FBgn0051151 1493.583333 28.87666667 44.59333333 0.00435195 0.225095233 0.145761698 2 -1 0.5 0.01 dme-miR-184-5p 6mer3-8 TGATAA 3R 22711003 22711008 - 3R_22711003_22711008_- 1 1 1 0 wge FBtr0310427|FBtr0310426 22710881|22710881 22711715|22711715 3R - 22710971 22711084 3'utr wge FlyBase G53471.1 TATAAATGTAACAATTCAATGTGATAGCAAAACAAAACCAGATGTTGATGTGTACAGAGGAGAGAATAAGTATAGATGATAAATAAGAGATCAAGCAGAATGTGTGTGTTGAAT 37 22711018 0.880243704 12 34 212 0.906976744 1.290034611 0.11627907 0.135135135 0.255813953 37 3 1 39 3R:22710971-22711084 6 wge FBtr0310426|FBtr0310427 22710881|22710881 22711715|22711715 TGATAA 6mer3-8 dme-miR-184-5p 3R - 22710966 22711045 3'utr wge FlyBase G40411.1 AGATGTTGATGTGTACAGAGGAGAGAATAAGTATAGATGATAAATAAGAGATCAAGCAGAATGTGTGTGTTGAATATTTA 13 22711017 0.805787125 8 13 78 1 1.342422681 0.136363636 0.461538462 0.681818182 13 0 0 22 3R:22710966-22711045 6 10 4113 FBgn0051151 1493.583333 28.87666667 44.59333333 0.006695308 0.346300358 0.224248767 10 9 9.5 0.01 dme-miR-92b-3p 7mer-A1 TGCAATA 3R 22724899 22724905 - 3R_22724899_22724905_- 0.78291182 0.782911824 0.782911822 0 CG4813 FBtr0084326 22724882 22725072 3R - 22724886 22724955 3'utr CG4813 FlyBase G53513.1 AAATACCAATTATACTACGTGACATTACAATAAGCCTACCATGTAACTATTGCAATAAACCGCAGAAAAC 9 22724931 0.966601301 5 9 47 1 1.079181246 0 0.333333333 0.5 9 0 0 12 3R:22724886-22724955 7 CG4813 FBtr0084326 22724882 22725072 TGCAATA 7mer-A1 dme-miR-92b-3p 3R - 22724899 22724955 3'utr CG4813 FlyBase G40441.1 AAATACCAATTATACTACGTGACATTACAATAAGCCTACCATGTAACTATTGCAATA 9 22724931 0.874597674 5 8 45 1 1 0 0.111111111 0.2 9 0 0 10 3R:22724899-22724955 6 3.5 4114 FBgn0039013 145 11.45 17.42 0.024137931 0.305676856 0.200918485 26 26 26 0.01 dme-miR-79-3p 7mer-A1 AGCTTTA 3R 22724994 22725000 - 3R_22724994_22725000_- 0.823349556 0.82333429 0.823341923 1.08E-05 CG4813 FBtr0084326 22724882 22725072 3R - 22724980 22725024 3'utr CG4813 FlyBase G53514.1 AAAACAGGCTTTGCATCCCGACGCAGCTTTAGATGATAATCCCCT 40 22724996 0.740100114 4 37 241 0.916666667 1.643452676 0.125 0.175 0.3125 40 4 0 44 3R:22724980-22725024 7 CG4813 FBtr0084326 22724882 22725072 AGCTTTA 7mer-A1 dme-miR-79-3p 3R - 22724980 22725030 3'utr CG4813 FlyBase G40442.1 CGCCATAAAACAGGCTTTGCATCCCGACGCAGCTTTAGATGATAATCCCCT 38 22724996 0.966710075 6 37 222 0.983333333 1.770852012 0.166666667 0.447368421 0.65 38 1 0 59 3R:22724980-22725030 7 35.5 4115 FBgn0039013 145 11.45 17.42 0.244827586 3.100436681 2.037887486 -4 -4 -4 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 3R 22734034 22734040 - 3R_22734034_22734040_- 0.782911824 0.782911824 0.782911824 0 Dcr-1 FBtr0084324 22734005 22734108 3R - 22734027 22734064 3'utr Dcr-1 FlyBase G53522.1 TTTTTAGACATAAGAACTTTAATTGTACAAATCTTAAA 11 22734042 0.759029527 3 11 110 1 1.041392685 0 0 0 11 0 0 11 3R:22734027-22734064 7 Dcr-1 FBtr0084324 22734005 22734108 GTACAAA 7mer-A1 dme-miR-305-5p 3R - 22734006 22734064 3'utr Dcr-1 FlyBase G40449.1 TTTTTAGACATAAGAACTTTAATTGTACAAATCTTAAATAGATTGTCTATGGTCGAATA 14 22734042 0.985401633 5 14 130 1 1.301029996 0 0.285714286 0.5 14 0 0 20 3R:22734006-22734064 7 11.5 4116 FBgn0039016 718.3333333 12.47 19.05666667 0.016009281 0.922213312 0.603463355 2 2 2 0.01 dme-miR-92b-3p 6mer2-7 TGCAAT 3R 22734092 22734097 - 3R_22734092_22734097_- 1 1 1 0 Dcr-1 FBtr0084324 22734005 22734108 3R - 22734068 22734137 stop_codon Dcr-1 FlyBase G53523.1 AGCAGGGCTTGATAGCCAAAAAAGACTAAGAAGTCATCGCTGCAATCGTGTTTCATTAGATTTAATGATT 18 22734086 0.920577005 8 17 146 0.95 1.278753601 0.2 0.055555556 0.15 18 1 0 19 3R:22734068-22734137 6 Dcr-1 FBtr0084324 22734005 22734108 TGCAAT 6mer2-7 dme-miR-92b-3p 3R - 22734068 22734181 stop_codon Dcr-1 FlyBase G40450.1 TGCCAAGTGCACGGCGGCCAAATGCGCATTGCGCCAACTCAAAAAGCAGGGCTTGATAGCCAAAAAAGACTAAGAAGTCATCGCTGCAATCGTGTTTCATTAGATTTAATGATT 19 22734083 0.986918323 8 16 138 0.807692308 0.720159303 0.153846154 0.315789474 0.5 19 2 3 21 3R:22734068-22734181 6 10 4117 FBgn0039016 718.3333333 12.47 19.05666667 0.013921114 0.801924619 0.524750743 -11 -14 -12.5 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 3R 22746531 22746536 + 3R_22746531_22746536_+ 1 1 1 0 HP1c FBtr0084309 22746429 22746605 3R + 22746493 22746565 3'utr HP1c FlyBase G44813.1 TGTATAGCTATCTGAAACCACTGGGTTCGTCCAGATTCATGTGACCCAACTGGCCGGAGCGAAAGAAGTGAAT 13 22746543 0.897039219 6 12 40 0.923076923 1.079181246 0.153846154 0 0 13 1 0 12 3R:22746493-22746565 6 HP1c FBtr0084309 22746429 22746605 ATGTGA 6mer3-8 dme-miR-1003-3p 3R + 22746498 22746581 3'utr HP1c FlyBase G33852.1 AGCTATCTGAAACCACTGGGTTCGTCCAGATTCATGTGACCCAACTGGCCGGAGCGAAAGAAGTGAATGAACTTTCGCGCGGCC 10 22746543 0.89806829 4 9 28 1 1.176091259 0.2 0.3 0.533333333 10 0 0 15 3R:22746498-22746581 6 5.5 4118 FBgn0039019 227.0466667 28.62 43.55666667 0.024224095 0.192173305 0.126272289 -12 -12 -12 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 3R 22749147 22749153 - 3R_22749147_22749153_- 0.620204266 0.620204266 0.620204266 0 rumi FBtr0310040|FBtr0084320 22749012|22749012 22749238|22749238 3R - 22749145 22749217 3'utr rumi FlyBase G53552.1 TTAAGCATTTCTCATTTTGTATTAAGTTGCTTAGAGCAGCGTGAATCTCTCTGTCCGCATTCCATGCATTTTT 28 22749175 0.941785536 14 27 246 0.965517241 1.146128036 0.137931034 0.035714286 0.068965517 28 0 1 28 3R:22749145-22749217 7 rumi FBtr0310040|FBtr0084320 22749012|22749012 22749238|22749238 TGCATTT 7mer-m8 dme-miR-277-3p 3R - 22749147 22749210 3'utr rumi FlyBase G40466.1 TTTCTCATTTTGTATTAAGTTGCTTAGAGCAGCGTGAATCTCTCTGTCCGCATTCCATGCATTT 15 22749175 0.988123257 8 14 128 0.916666667 1.342422681 0 0.466666667 0.666666667 15 2 0 22 3R:22749147-22749210 6 1.5 4119 FBgn0086253 248.6666667 19.81 30.24666667 0.006032172 0.075719334 0.049592242 22 22 22 0.01 dme-miR-283-5p 8mer-m1 TGATATTT 3R 22792893 22792900 + 3R_22792893_22792900_+ 0.555593841 0.555593841 0.555593841 0 CG7029 FBtr0310037|FBtr0113271|FBtr0344297|FBtr0084312|FBtr0310038|FBtr0113270 22792678|22792678|22792678|22792678|22792678|22792678 22794030|22794030|22794030|22794030|22794030|22794030 3R + 22792867 22793110 3'utr CG7029 FlyBase G44843.2 TGCTTAGTTACTATTGGCCCGGAAAGTGATATTTAGATGGGAGATGATTCGATCAGGGATCACGGAGCGAGAACTGATAGCGAGATGTGCTGGTATCTTTGATTGATTTAGTTGTCCTTATTTGCGGCAGAGCAGCGACCGACTGCGAGAGGAAGTAGCTAAATTTTCTTTTTTTACAAAGTATACATAATGAAATCTATACATATGCCAAGTACGCGTAAATTAAACAAATATTTTGATGTAT 42 22792899 0.983434096 23 38 268 0.957446809 1.653212514 0.14893617 0.071428571 0.170212766 42 2 0 45 3R:22792867-22793110 8 CG7029 FBtr0310038|FBtr0113270|FBtr0344297|FBtr0084312|FBtr0310037|FBtr0113271 22792678|22792678|22792678|22792678|22792678|22792678 22794030|22794030|22794030|22794030|22794030|22794030 TGATATTT 8mer-m1 dme-miR-283-5p 3R + 22792828 22792974 3'utr CG7029 FlyBase G33875.1 TTGTAAAATTCTAGACTAAGGCTTTGTGTGCGGCTCGATTGCTTAGTTACTATTGGCCCGGAAAGTGATATTTAGATGGGAGATGATTCGATCAGGGATCACGGAGCGAGAACTGATAGCGAGATGTGCTGGTATCTTTGATTGATT 50 22792899 0.880642247 20 46 308 0.905405405 1.127104798 0.283783784 0.3 0.527027027 50 3 4 67 3R:22792828-22792974 8 15 4120 FBgn0039026 1187.603333 21.31 32.52666667 0.01263048 0.703894885 0.461160074 -6 -6 -6 0.01 dme-miR-970-3p 6mer2-7 CTTATG 3R 22793642 22793647 + 3R_22793642_22793647_+ 1 1 1 0 CG7029 FBtr0310037|FBtr0113271|FBtr0344297|FBtr0084312|FBtr0310038|FBtr0113270 22792678|22792678|22792678|22792678|22792678|22792678 22794030|22794030|22794030|22794030|22794030|22794030 3R + 22793627 22793701 3'utr CG7029 FlyBase G44847.1 TTCGTTTGTAACGAGCTTATGCTGTTGAGCGCAGGCTCAAAAAGTGATTTCAATTGTACGATATATGTTTCCAGC 186 22793671 0.691228798 10 179 1122 0.956896552 1.744292983 0.228448276 0.193548387 0.353448276 186 7 3 222 3R:22793627-22793701 6 CG7029 FBtr0310038|FBtr0113270|FBtr0344297|FBtr0084312|FBtr0310037|FBtr0113271 22792678|22792678|22792678|22792678|22792678|22792678 22794030|22794030|22794030|22794030|22794030|22794030 CTTATG 6mer2-7 dme-miR-970-3p 3R + 22793625 22793701 3'utr CG7029 FlyBase G33876.1 ATTTCGTTTGTAACGAGCTTATGCTGTTGAGCGCAGGCTCAAAAAGTGATTTCAATTGTACGATATATGTTTCCAGC 133 22793652 0.737816411 10 132 795 0.989583333 2.278753601 0.119791667 0.360902256 0.557291667 133 2 0 190 3R:22793625-22793701 6 50 4121 FBgn0039026 1187.603333 21.31 32.52666667 0.0421016 2.346316283 1.537200246 -29 -10 -19.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 22793921 22793926 + 3R_22793921_22793926_+ 1 1 1 0 CG7029 FBtr0310037|FBtr0113271|FBtr0344297|FBtr0084312|FBtr0310038|FBtr0113270 22792678|22792678|22792678|22792678|22792678|22792678 22794030|22794030|22794030|22794030|22794030|22794030 3R + 22793849 22793959 3'utr CG7029 FlyBase G44849.1 TGTATAGCTACTCTTATTGTATTATGTACAAGCGGACGAAACACATATTATAGATTTGCGGGAGAATTTATCACCAAATGGATATGCGGGAGTATATTATGTATTAAAACG 26 22793931 0.902254448 13 25 173 0.962962963 1.113943352 0.259259259 0.038461538 0.074074074 26 0 1 26 3R:22793849-22793959 6 CG7029 FBtr0310038|FBtr0113270|FBtr0344297|FBtr0084312|FBtr0310037|FBtr0113271 22792678|22792678|22792678|22792678|22792678|22792678 22794030|22794030|22794030|22794030|22794030|22794030 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 22793911 22793956 3'utr CG7029 FlyBase G33878.2 AGAATTTATCACCAAATGGATATGCGGGAGTATATTATGTATTAAA 10 22793931 0.980977883 5 8 48 1 1.176091259 0 0.4 0.6 10 0 0 15 3R:22793911-22793956 6 10.5 4122 FBgn0039026 1187.603333 21.31 32.52666667 0.008841336 0.49272642 0.322812052 -10 -10 -10 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 3R 23049704 23049710 - 3R_23049704_23049710_- 0.782911824 0.782911824 0.782911824 0 p53 FBtr0345262|FBtr0084360|FBtr0301765|FBtr0084359 23049655|23049655|23049655|23049655 23049964|23049964|23049964|23049964 3R - 23049682 23049726 3'utr p53 FlyBase G53557.1 ACAACAAACATACTCTGTACAAAAAAGCCAAAAGTGAATTTATTA 11 23049712 0.724762631 4 11 37 1 1.041392685 0 0 0 11 0 0 11 3R:23049682-23049726 7 p53 FBtr0301765|FBtr0084359|FBtr0345262|FBtr0084360 23049655|23049655|23049655|23049655 23049964|23049964|23049964|23049964 GTACAAA 7mer-A1 dme-miR-305-5p 3R - 23049664 23049726 3'utr p53 FlyBase G40468.1 ACAACAAACATACTCTGTACAAAAAAGCCAAAAGTGAATTTATTAAAGAGTTGTCATATTTTG 8 23049712 0.936389874 6 8 31 1 1.041392685 0.181818182 0.25 0.454545455 8 0 0 11 3R:23049664-23049726 7 7.5 4123 FBgn0039044 93.11333333 6.436666667 9.84 0.080547004 1.165199379 0.762195122 2 2 2 0.01 dme-miR-283-5p 7mer-m8 TGATATT 3R 23049831 23049837 - 3R_23049831_23049837_- 0.620203677 0.620203677 0.620203677 0 p53 FBtr0345262|FBtr0084360|FBtr0301765|FBtr0084359 23049655|23049655|23049655|23049655 23049964|23049964|23049964|23049964 3R - 23049797 23049986 stop_codon p53 FlyBase G53559.1 ACGTGCCTACGAGCTGCCATGACTTCTGATCTGGTCGACAATCTCCCAGGTATCAGATACCTTTGAAATGTGTTGCATCTGTGGGGTATACTACATAGCTATTAGTATCTTAAGTTTGTATTAGTCCTTGTTCGTAAGGCGTTTAACGGTGATATTCCCCTTTTGGCATGTTCGATGGCCGAAAAGAAAA 127 23049832 0.976635608 29 120 1008 0.957055215 1.716003344 0.233128834 0.204724409 0.380368098 127 5 2 156 3R:23049797-23049986 7 p53 FBtr0301765|FBtr0084359|FBtr0345262|FBtr0084360 23049655|23049655|23049655|23049655 23049964|23049964|23049964|23049964 TGATATT 7mer-m8 dme-miR-283-5p 3R - 23049819 23049918 3'utr p53 FlyBase G40469.1 TGTGTTGCATCTGTGGGGTATACTACATAGCTATTAGTATCTTAAGTTTGTATTAGTCCTTGTTCGTAAGGCGTTTAACGGTGATATTCCCCTTTTGGCA 52 23049832 0.742390358 13 49 419 0.921052632 1.544068044 0.223684211 0.346153846 0.552631579 52 5 1 70 3R:23049819-23049918 7 56.5 4124 FBgn0039044 93.11333333 6.436666667 9.84 0.606787428 8.777835318 5.741869919 -5 -5 -5 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 23049955 23049960 - 3R_23049955_23049960_- 0.998968226 1 0.999484113 0.000729593 p53 FBtr0345262|FBtr0084360|FBtr0301765|FBtr0084359 23049655|23049655|23049655|23049655 23049964|23049964|23049964|23049964 3R - 23049797 23049986 stop_codon p53 FlyBase G53559.1 ACGTGCCTACGAGCTGCCATGACTTCTGATCTGGTCGACAATCTCCCAGGTATCAGATACCTTTGAAATGTGTTGCATCTGTGGGGTATACTACATAGCTATTAGTATCTTAAGTTTGTATTAGTCCTTGTTCGTAAGGCGTTTAACGGTGATATTCCCCTTTTGGCATGTTCGATGGCCGAAAAGAAAA 127 23049960 0.976635608 29 120 1008 0.957055215 1.716003344 0.233128834 0.204724409 0.380368098 127 5 2 156 3R:23049797-23049986 6 p53 FBtr0301765|FBtr0084359|FBtr0345262|FBtr0084360 23049655|23049655|23049655|23049655 23049964|23049964|23049964|23049964 TGATCT 6mer3-8 dme-bantam-3p 3R - 23049946 23049985 stop_codon p53 FlyBase G40470.1 CGTGCCTACGAGCTGCCATGACTTCTGATCTGGTCGACAA 6 23049953 0.837643367 4 5 40 0.909090909 1 0 0.5 0.727272727 6 1 0 10 3R:23049946-23049985 6 14.5 4125 FBgn0039044 93.11333333 6.436666667 9.84 0.155724207 2.252718799 1.473577236 0 -7 -3.5 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3R 23114369 23114374 - 3R_23114369_23114374_- 1 1 1 0 Rassf FBtr0084407 23114012 23114672 3R - 23114347 23114394 3'utr Rassf FlyBase G53574.1 CATTCGTTTAGAAAGCGTTTAAGACTTGTAACTAACCAAAAAATAATT 14 23114376 0.980246234 4 13 96 0.947368421 1.255272505 0.157894737 0.214285714 0.421052632 14 1 0 18 3R:23114347-23114394 6 Rassf FBtr0084407 23114012 23114672 AAGACT 6mer3-8 dme-miR-14-3p 3R - 23114323 23114409 3'utr Rassf FlyBase G40479.1 AATTCCAGGCATTTCCATTCGTTTAGAAAGCGTTTAAGACTTGTAACTAACCAAAAAATAATTATTAATCCACAACATTACCATACA 19 23114376 0.98397587 8 18 138 0.964285714 1.130333768 0.178571429 0.421052632 0.607142857 19 0 1 27 3R:23114323-23114409 6 15 4126 FBgn0039055 618.9666667 21.53666667 33.01666667 0.024233938 0.696486612 0.454316002 2 2 2 0.01 dme-miR-283-5p 7mer-m8 TGATATT 3R 23123706 23123712 + 3R_23123706_23123712_+ 0.620203677 0.620203677 0.620203677 0 CenB1A FBtr0084369|FBtr0084368 23123628|23123628 23124217|23124217 3R + 23123648 23123749 3'utr CenB1A FlyBase G44875.1 AAGAGTTAGGACCTTACTGGATATTATGGAATAATTTGTTCCAATTATTAGGATAGCGTGATATTGGATTGTTATTGGCTTTATAACGCATTAACCAGGAAT 165 23123722 0.801137762 19 161 1534 0.974226804 1.975431809 0.195876289 0.163636364 0.288659794 165 4 1 189 3R:23123648-23123749 7 CenB1A FBtr0084369|FBtr0084368 23123628|23123628 23124217|23124217 TGATATT 7mer-m8 dme-miR-283-5p 3R + 23123640 23123746 3'utr CenB1A FlyBase G33898.1 AGGGCCGCAAGAGTTAGGACCTTACTGGATATTATGGAATAATTTGTTCCAATTATTAGGATAGCGTGATATTGGATTGTTATTGGCTTTATAACGCATTAACCAGG 142 23123722 0.881015159 18 133 1249 0.944186047 1.830374783 0.265116279 0.38028169 0.590697674 142 10 2 203 3R:23123640-23123746 7 79.5 4127 FBgn0039056 579.2733333 23.55666667 35.98 0.137240911 3.374840809 2.209560867 -16 -16 -16 0.01 dme-miR-305-5p 7mer-m1 GTACAAT 3R 23123990 23123996 - 3R_23123990_23123996_- 0.765586663 0.765586663 0.765586663 0 CG31365 FBtr0084406 23123960 23124296 3R - 23123971 23124006 3'utr CG31365 FlyBase G53587.1 ATAAGACGATGTACAATTTTATAGGCAAATATACGT 5 23123997 0.976482437 3 5 32 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:23123971-23124006 7 CG31365 FBtr0084406 23123960 23124296 GTACAAT 7mer-m1 dme-miR-305-5p 3R - 23123971 23124014 3'utr CG31365 FlyBase G40491.1 AATACCACATAAGACGATGTACAATTTTATAGGCAAATATACGT 13 23123990 0.633657946 4 11 86 0.75 1.176091259 0 0.461538462 0.65 13 5 0 15 3R:23123971-23124014 7 8.5 4128 FBgn0051365 445.6766667 23.35333333 35.95666667 0.019072123 0.363973737 0.236395661 1 -6 -2.5 0.01 dme-miR-970-3p 7mer-m8 TCTTATG 3R 23124001 23124007 + 3R_23124001_23124007_+ 0.658999343 0.658999343 0.658999343 0 CenB1A FBtr0084369|FBtr0084368 23123628|23123628 23124217|23124217 3R + 23123971 23124025 3'utr CenB1A FlyBase G44878.1 ACGTATATTTGCCTATAAAATTGTACATCGTCTTATGTGGTATTTATTAAACGAT 7 23124003 0.991194347 5 6 68 0.9 0.954242509 0.2 0.428571429 0.6 7 1 0 9 3R:23123971-23124025 7 CenB1A FBtr0084369|FBtr0084368 23123628|23123628 23124217|23124217 TCTTATG 7mer-m8 dme-miR-970-3p 3R + 23123981 23124018 3'utr CenB1A FlyBase G33900.1 GCCTATAAAATTGTACATCGTCTTATGTGGTATTTATT 5 23124004 0.988207458 3 5 52 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:23123981-23124018 7 5 4129 FBgn0039056 579.2733333 23.55666667 35.98 0.008631504 0.212254139 0.138966092 -2 -3 -2.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 23124213 23124218 - 3R_23124213_23124218_- 1 1 1 0 CG31365 FBtr0084406 23123960 23124296 3R - 23124095 23124249 3'utr CG31365 FlyBase G53588.1 ATGTTTTACACCTGAAGAGACCAACTTTGATTGATCTGAATATTTTACAACTTTATTCGCGAACCTAGAGTGCTCACAACAGTTGGCACCAAAAATCATCAACATGATAGCGTTAAAACATTTAGAAACATGCAGCATTAAACAGTTTAGCAAAC 47 23124219 0.982773831 13 44 359 0.885245902 1.73239376 0.049180328 0.255319149 0.426229508 47 7 0 54 3R:23124095-23124249 6 CG31365 FBtr0084406 23123960 23124296 TGATCT 6mer3-8 dme-bantam-3p 3R - 23124197 23124258 3'utr CG31365 FlyBase G40492.1 TGGACCACCATGTTTTACACCTGAAGAGACCAACTTTGATTGATCTGAATATTTTACAACTT 36 23124219 0.747354352 6 36 310 1 1.740362689 0.109090909 0.388888889 0.6 36 0 0 55 3R:23124197-23124258 6 31 4130 FBgn0051365 445.6766667 23.35333333 35.95666667 0.069557153 1.327433628 0.862148883 1 1 1 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3R 23151617 23151623 - 3R_23151617_23151623_- 0.44312913 0.443131017 0.443130074 1.34E-06 unk FBtr0084402|FBtr0305573|FBtr0337052 23151562|23150239|23149651 23153939|23153939|23153939 3R - 23151574 23151647 3'utr unk FlyBase G53602.1 ACGCTACTGTAAGAGTGATTTTTATGTGATTTTGAAACTACTTGAATATGTGATCCAGAAATATATAAAAAACA 18 23151628 0.971416864 8 18 158 1 1.342422681 0.363636364 0.222222222 0.363636364 18 0 0 22 3R:23151574-23151647 7 unk FBtr0305573|FBtr0337052|FBtr0084402 23150239|23149651|23151562 23153939|23153939|23153939 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 23151611 23151647 3'utr unk FlyBase G40506.1 ACGCTACTGTAAGAGTGATTTTTATGTGATTTTGAAA 16 23151616 0.775366016 7 14 167 0.896551724 1.113943352 0.275862069 0.625 0.793103448 16 2 1 26 3R:23151611-23151647 7 9 4131 FBgn0004395 913.0833333 29.83666667 45.42666667 0.009856713 0.301642275 0.198121515 5 -7 -1 0.01 dme-miR-305-5p 6mer2-7 GTACAA 3R 23152598 23152603 - 3R_23152598_23152603_- 1 1 1 0 unk FBtr0305572|FBtr0084402|FBtr0305571|FBtr0305573|FBtr0337052 23152090|23151562|23152090|23150239|23149651 23153939|23153939|23153939|23153939|23153939 3R - 23152522 23152621 3'utr unk FlyBase G53605.1 TCCAGCATTTGGCTGATTGTACAAGAACGAATATGAACAGATATATATTTATGGGAAATTTGAACGCAGATTCGATGAGTGTGATGTTGAAAGCATAAAC 11 23152579 0.982151324 7 10 68 0.916666667 0.740362689 0.083333333 0.090909091 0.166666667 11 0 1 11 3R:23152522-23152621 6 unk FBtr0305573|FBtr0337052|FBtr0305571|FBtr0305572|FBtr0084402 23150239|23149651|23152090|23152090|23151562 23153939|23153939|23153939|23153939|23153939 GTACAA 6mer2-7 dme-miR-305-5p 3R - 23152579 23152624 3'utr unk FlyBase G40508.1 AAATCCAGCATTTGGCTGATTGTACAAGAACGAATATGAACAGATA 5 23152605 0.970803386 3 5 25 1 0.84509804 0 0.4 0.571428571 5 0 0 7 3R:23152579-23152624 6 4.5 4132 FBgn0004395 913.0833333 29.83666667 45.42666667 0.004928356 0.150821137 0.099060757 -24 2 -11 0.01 dme-miR-8-3p 6mer2-7 AGTATT 3R 23152636 23152641 - 3R_23152636_23152641_- 1 1 1 0 unk FBtr0305572|FBtr0084402|FBtr0305571|FBtr0305573|FBtr0337052 23152090|23151562|23152090|23150239|23149651 23153939|23153939|23153939|23153939|23153939 3R - 23152630 23152714 3'utr unk FlyBase G53606.1 TTTACTTTCATAGTCTCAACTGGACGCTTCCAAATTAGTAAAAGCATAAAATGAATCGTCAATGTCAAAACGTAGTATTTAAGTC 10 23152663 0.952063577 8 9 73 1 1.079181246 0 0.2 0.333333333 10 0 0 12 3R:23152630-23152714 6 unk FBtr0305573|FBtr0337052|FBtr0305571|FBtr0305572|FBtr0084402 23150239|23149651|23152090|23152090|23151562 23153939|23153939|23153939|23153939|23153939 AGTATT 6mer2-7 dme-miR-8-3p 3R - 23152630 23152672 3'utr unk FlyBase G40509.1 AGCATAAAATGAATCGTCAATGTCAAAACGTAGTATTTAAGTC 5 23152635 0.962851323 4 5 28 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:23152630-23152672 6 3 4133 FBgn0004395 913.0833333 29.83666667 45.42666667 0.003285571 0.100547425 0.066040505 22 -6 8 0.01 dme-miR-965-3p 6mer2-7 ACGCTT 3R 23152686 23152691 - 3R_23152686_23152691_- 1 1 1 0 unk FBtr0305572|FBtr0084402|FBtr0305571|FBtr0305573|FBtr0337052 23152090|23151562|23152090|23150239|23149651 23153939|23153939|23153939|23153939|23153939 3R - 23152630 23152714 3'utr unk FlyBase G53606.1 TTTACTTTCATAGTCTCAACTGGACGCTTCCAAATTAGTAAAAGCATAAAATGAATCGTCAATGTCAAAACGTAGTATTTAAGTC 10 23152694 0.952063577 8 9 73 1 1.079181246 0 0.2 0.333333333 10 0 0 12 3R:23152630-23152714 6 unk FBtr0305573|FBtr0337052|FBtr0305571|FBtr0305572|FBtr0084402 23150239|23149651|23152090|23152090|23151562 23153939|23153939|23153939|23153939|23153939 ACGCTT 6mer2-7 dme-miR-965-3p 3R - 23152683 23152711 3'utr unk FlyBase G40510.1 ACTTTCATAGTCTCAACTGGACGCTTCCA 6 23152695 0.814359771 3 6 41 1 1 0 0.5 0.7 6 0 0 10 3R:23152683-23152711 6 5 4134 FBgn0004395 913.0833333 29.83666667 45.42666667 0.005475951 0.167579041 0.110067508 3 4 3.5 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3R 23152762 23152768 - 3R_23152762_23152768_- 0.521223855 0.521223855 0.521223855 0 unk FBtr0305572|FBtr0084402|FBtr0305571|FBtr0305573|FBtr0337052 23152090|23151562|23152090|23150239|23149651 23153939|23153939|23153939|23153939|23153939 3R - 23152725 23152793 3'utr unk FlyBase G53607.1 ACGTATATAATCTATTAGGTTACTTTGTGATTTGAATAGTGCTTTAAGTACTTACTTTGCAGATGACTT 63 23152762 0.992289151 12 60 681 0.952941176 1.306425028 0.082352941 0.253968254 0.447058824 63 1 3 81 3R:23152725-23152793 7 unk FBtr0305573|FBtr0337052|FBtr0305571|FBtr0305572|FBtr0084402 23150239|23149651|23152090|23152090|23151562 23153939|23153939|23153939|23153939|23153939 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 23152728 23152793 3'utr unk FlyBase G40511.1 ACGTATATAATCTATTAGGTTACTTTGTGATTTGAATAGTGCTTTAAGTACTTACTTTGCAGATGA 47 23152762 0.991115233 9 45 476 0.97260274 1.550228353 0.054794521 0.340425532 0.575342466 47 1 1 71 3R:23152728-23152793 7 53.5 4135 FBgn0004395 913.0833333 29.83666667 45.42666667 0.05859268 1.793095743 1.177722336 -6 -6 -6 0.01 dme-miR-318-3p 7mer-A1 CCAGTGA 3R 23153146 23153152 - 3R_23153146_23153152_- 0.823349562 0.823349562 0.823349562 0 unk FBtr0305572|FBtr0084402|FBtr0084403|FBtr0305571|FBtr0305573|FBtr0337052 23152090|23151562|23153040|23152090|23150239|23149651 23153939|23153939|23153939|23153939|23153939|23153939 3R - 23153131 23153204 3'utr unk FlyBase G53609.1 AATATATTGTCGCATAGAAGAGCAGAAAACAACCACAAACAAACAAATACCACCAGTGATTTTATATAAGCCGA 69 23153144 0.971357048 9 67 392 0.976470588 1.919078092 0.011764706 0.202898551 0.352941176 69 2 0 83 3R:23153131-23153204 7 unk FBtr0305573|FBtr0337052|FBtr0084403|FBtr0305571|FBtr0305572|FBtr0084402 23150239|23149651|23153040|23152090|23152090|23151562 23153939|23153939|23153939|23153939|23153939|23153939 CCAGTGA 7mer-A1 dme-miR-318-3p 3R - 23153120 23153164 3'utr unk FlyBase G40513.1 AAACAAATACCACCAGTGATTTTATATAAGCCGATTTTCAAACTG 36 23153144 0.634950147 5 34 230 0.961538462 1.698970004 0 0.305555556 0.519230769 36 2 0 50 3R:23153120-23153164 7 46 4136 FBgn0004395 913.0833333 29.83666667 45.42666667 0.050378753 1.541727181 1.012621074 -8 -8 -8 0.01 dme-miR-1012-3p 7mer-m8 TTGACTA 3R 23153237 23153243 - 3R_23153237_23153243_- 0.631525999 0.631525999 0.631525999 0 unk FBtr0305572|FBtr0084402|FBtr0084403|FBtr0305571|FBtr0305573|FBtr0337052 23152090|23151562|23153040|23152090|23150239|23149651 23153939|23153939|23153939|23153939|23153939|23153939 3R - 23153224 23153262 3'utr unk FlyBase G53610.1 TTCTAGACACTTTTAGCAATTGACTATTAACAAATTTAT 23 23153236 0.754473532 5 22 188 0.967741935 1.176091259 0 0.347826087 0.516129032 23 0 1 30 3R:23153224-23153262 7 unk FBtr0305573|FBtr0337052|FBtr0084403|FBtr0305571|FBtr0305572|FBtr0084402 23150239|23149651|23153040|23152090|23152090|23151562 23153939|23153939|23153939|23153939|23153939|23153939 TTGACTA 7mer-m8 dme-miR-1012-3p 3R - 23153224 23153254 3'utr unk FlyBase G40514.1 ACTTTTAGCAATTGACTATTAACAAATTTAT 17 23153236 0.854580238 4 17 131 1 1.491361694 0.032258065 0.588235294 0.774193548 17 0 0 31 3R:23153224-23153254 7 20 4137 FBgn0004395 913.0833333 29.83666667 45.42666667 0.021903806 0.670316166 0.440270032 -7 -7 -7 0.01 dme-miR-190-5p 6mer3-8 ACATAT 3R 23153405 23153410 - 3R_23153405_23153410_- 1 1 1 0 unk FBtr0305572|FBtr0084402|FBtr0084403|FBtr0305571|FBtr0305573|FBtr0337052 23152090|23151562|23153040|23152090|23150239|23149651 23153939|23153939|23153939|23153939|23153939|23153939 3R - 23153279 23153423 3'utr unk FlyBase G53611.1 TTTTTTTTTAACCACATATGTATCTCTATATTTGTATTTAAATATGCTACACTTTCAGTCATATTGTACTTTTCACTAGTATTACATAAGAAATTATGAGAACTAAACAATTACAAGATGTAATTGAATGAAAGATATATAAATA 105 23153405 0.987374535 20 102 911 0.952 2.075546961 0.048 0.161904762 0.296 105 6 0 119 3R:23153279-23153423 6 unk FBtr0305573|FBtr0337052|FBtr0084403|FBtr0305571|FBtr0305572|FBtr0084402 23150239|23149651|23153040|23152090|23152090|23151562 23153939|23153939|23153939|23153939|23153939|23153939 ACATAT 6mer3-8 dme-miR-190-5p 3R - 23153276 23153492 3'utr unk FlyBase G40515.1 GTTTAATATTCAATGTTTAGGCATACATATTTTCTAATCTACTGCACGAATTTGCAATGTCTCATTTATTTTTTTTTTAACCACATATGTATCTCTATATTTGTATTTAAATATGCTACACTTTCAGTCATATTGTACTTTTCACTAGTATTACATAAGAAATTATGAGAACTAAACAATTACAAGATGTAATTGAATGAAAGATATATAAATATAT 90 23153405 0.987709194 27 82 753 0.910447761 2.086359831 0.029850746 0.333333333 0.552238806 90 12 0 122 3R:23153276-23153492 6 47 4138 FBgn0004395 913.0833333 29.83666667 45.42666667 0.051473944 1.57524299 1.034634576 -5 -5 -5 0.01 dme-miR-283-5p 8mer-A1 TGATATTA 3R 23185294 23185301 + 3R_23185294_23185301_+ 0.592192292 0.592192292 0.592192292 0 Irk1 FBtr0336479|FBtr0336475|FBtr0336478|FBtr0336476|FBtr0336474|FBtr0336473|FBtr0336477 23184958|23184958|23184958|23184958|23184958|23184958|23184958 23185642|23185562|23185642|23185562|23185642|23185642|23185642 3R + 23185091 23185409 3'utr Irk1 FlyBase G44901.1 GAGCTGCTGCAGCTGTGAACATCCCTCAAAAAAATCCCCCTATCCTGCTGAAGTGGAGGCAATCTGATTGTTATCCACCTATCTACTATACTTACTACTAACCCTGAAACGATTGTACATGTTTATGTCTAGGCTAAGCTGATGAATGATTCACGTTGTTAGCTTTAGCTTTGTGTTGAATTTACTATAGTTAAGTTACAAATTGATATTAACGCAAAGTAAGATGTGAGACCCAGAAACCAAAATGCTGCAACTTAGACAACTAGATAAGTCATTAAACGGCTCACTTAACATGAAATTTATGCGAAGACGCAGCGGA 424 23185293 0.979824116 55 406 2960 0.951219512 1.859909919 0.234521576 0.198113208 0.362101313 424 20 6 507 3R:23185091-23185409 8 Irk1 FBtr0336474|FBtr0336473|FBtr0336477|FBtr0336479|FBtr0336475|FBtr0336478|FBtr0336476 23184958|23184958|23184958|23184958|23184958|23184958|23184958 23185642|23185642|23185642|23185642|23185562|23185642|23185562 TGATATTA 8mer-A1 dme-miR-283-5p 3R + 23185172 23185369 3'utr Irk1 FlyBase G33921.2 TCTACTATACTTACTACTAACCCTGAAACGATTGTACATGTTTATGTCTAGGCTAAGCTGATGAATGATTCACGTTGTTAGCTTTAGCTTTGTGTTGAATTTACTATAGTTAAGTTACAAATTGATATTAACGCAAAGTAAGATGTGAGACCCAGAAACCAAAATGCTGCAACTTAGACAACTAGATAAGTCATTAAA 206 23185293 0.976004611 35 197 1511 0.961805556 1.965358514 0.239583333 0.291262136 0.493055556 206 9 2 277 3R:23185172-23185369 8 120 4139 FBgn0265042 1730.336667 66.08666667 101.7066667 0.069350666 1.815797438 1.17986366 1 1 1 0.01 dme-miR-968-5p 6mer3-8 ACTACT 3R 23186000 23186005 - 3R_23186000_23186005_- 1 1 1 0 cnc FBtr0306755|FBtr0330372|FBtr0306744|FBtr0306747|FBtr0306754|FBtr0306751|FBtr0306749|FBtr0306745|FBtr0306746|FBtr0336455|FBtr0306750|FBtr0306748|FBtr0306753 23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578 23187443|23187302|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443 3R - 23185978 23186037 3'utr cnc FlyBase G53623.1 AAATTGAAATTGAACTAATTACCTACTATTGTACTACTACGCCTACGGACATAAAAAATA 18 23186008 0.982835979 3 17 132 0.952380952 1.301029996 0 0.166666667 0.285714286 18 1 0 20 3R:23185978-23186037 6 cnc FBtr0306751|FBtr0336455|FBtr0306748|FBtr0306746|FBtr0306750|FBtr0306754|FBtr0306749|FBtr0306745|FBtr0306753|FBtr0306747|FBtr0306744|FBtr0306755|FBtr0330372 23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578 23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187302 ACTACT 6mer3-8 dme-miR-968-5p 3R - 23185984 23186021 3'utr cnc FlyBase G40529.1 AATTACCTACTATTGTACTACTACGCCTACGGACATAA 12 23186008 0.703043382 2 11 79 1 1.342422681 0 0.666666667 0.818181818 12 0 0 22 3R:23185984-23186021 6 13 4140 FBgn0262975 1286.603333 24.08333333 36.96666667 0.010104124 0.539792388 0.35166817 3 3 3 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 23186637 23186642 - 3R_23186637_23186642_- 1 1 1 0 cnc FBtr0306755|FBtr0308226|FBtr0330372|FBtr0306744|FBtr0306747|FBtr0308227|FBtr0306752|FBtr0306754|FBtr0306751|FBtr0306749|FBtr0306745|FBtr0306746|FBtr0336455|FBtr0306750|FBtr0306748|FBtr0306753 23185578|23186410|23185578|23185578|23185578|23186410|23186410|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578 23187443|23187443|23187302|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443 3R - 23186607 23186662 3'utr cnc FlyBase G53624.1 TTTACATTTGTAAGCTATATTCTAGTGAAAGATCTACCACAGCGGTGAATAGTTGT 35 23186643 0.945263188 5 35 234 1 1.653212514 0.066666667 0.257142857 0.422222222 35 0 0 45 3R:23186607-23186662 6 cnc FBtr0306751|FBtr0336455|FBtr0306748|FBtr0306746|FBtr0306752|FBtr0306750|FBtr0306754|FBtr0306749|FBtr0306745|FBtr0306753|FBtr0306747|FBtr0308226|FBtr0306744|FBtr0308227|FBtr0306755|FBtr0330372 23185578|23185578|23185578|23185578|23186410|23185578|23185578|23185578|23185578|23185578|23185578|23186410|23185578|23186410|23185578|23185578 23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187302 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R - 23186576 23186684 3'utr cnc FlyBase G40530.1 CATGAATTACGGGCGTAAGACATTTACATTTGTAAGCTATATTCTAGTGAAAGATCTACCACAGCGGTGAATAGTTGTAAATCGTTCTAAACTCATAAGGCATTTATCA 32 23186643 0.979991233 7 31 217 1 1.662757832 0.043478261 0.387096774 0.586956522 31 0 0 46 3R:23186576-23186684 6 28.5 4141 FBgn0262975 1286.603333 24.08333333 36.96666667 0.022151349 1.183391003 0.770964833 1 1 1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 23187025 23187031 - 3R_23187025_23187031_- 0.801970437 0.801970437 0.801970437 0 cnc FBtr0306755|FBtr0306755|FBtr0306755|FBtr0308226|FBtr0308226|FBtr0308226|FBtr0330372|FBtr0330372|FBtr0330372|FBtr0306744|FBtr0306744|FBtr0306744|FBtr0306747|FBtr0306747|FBtr0306747|FBtr0308227|FBtr0308227|FBtr0308227|FBtr0306752|FBtr0306752|FBtr0306752|FBtr0306754|FBtr0306754|FBtr0306754|FBtr0306751|FBtr0306751|FBtr0306751|FBtr0306749|FBtr0306749|FBtr0306749|FBtr0306745|FBtr0306745|FBtr0306745|FBtr0306746|FBtr0306746|FBtr0306746|FBtr0336455|FBtr0336455|FBtr0336455|FBtr0306750|FBtr0306750|FBtr0306750|FBtr0306748|FBtr0306748|FBtr0306748|FBtr0306753|FBtr0306753|FBtr0306753 23185578|23185578|23185578|23186410|23186410|23186410|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23186410|23186410|23186410|23186410|23186410|23186410|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578 23187443|23187443|23187443|23187443|23187443|23187443|23187302|23187302|23187302|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443 3R - 23186980 23187085 3'utr cnc FlyBase G53625.1 TGGACAGCGTATGCGAAGCCTTTTACTTAATTGCAATTAATGAAAAACAAAACTTGTGATAAAACAGCTCTTTTACTCCGAAATATTTGCGCCCCAAAGGTCAAGC 77 23187032 0.856437025 8 72 370 0.954022989 1.618048097 0.103448276 0.12987013 0.229885057 77 3 1 83 3R:23186980-23187085 7 cnc FBtr0306751|FBtr0306751|FBtr0306751|FBtr0336455|FBtr0336455|FBtr0336455|FBtr0306748|FBtr0306748|FBtr0306748|FBtr0306746|FBtr0306746|FBtr0306746|FBtr0306752|FBtr0306752|FBtr0306752|FBtr0306750|FBtr0306750|FBtr0306750|FBtr0306754|FBtr0306754|FBtr0306754|FBtr0306749|FBtr0306749|FBtr0306749|FBtr0306745|FBtr0306745|FBtr0306745|FBtr0306753|FBtr0306753|FBtr0306753|FBtr0306747|FBtr0306747|FBtr0306747|FBtr0308226|FBtr0308226|FBtr0308226|FBtr0306744|FBtr0306744|FBtr0306744|FBtr0308227|FBtr0308227|FBtr0308227|FBtr0306755|FBtr0306755|FBtr0306755|FBtr0330372|FBtr0330372|FBtr0330372 23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23186410|23186410|23186410|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23186410|23186410|23186410|23185578|23185578|23185578|23186410|23186410|23186410|23185578|23185578|23185578|23185578|23185578|23185578 23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187302|23187302|23187302 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 23186975 23187133 3'utr cnc FlyBase G40531.1 TGATTATTTGGACTCGTCCAAGTCCGTCTTGCATGGTGTTGTCCCTTCTGGACAGCGTATGCGAAGCCTTTTACTTAATTGCAATTAATGAAAAACAAAACTTGTGATAAAACAGCTCTTTTACTCCGAAATATTTGCGCCCCAAAGGTCAAGCTGACA 59 23187032 0.966387214 14 57 307 0.975308642 1.596597096 0.098765432 0.322033898 0.50617284 59 1 1 79 3R:23186975-23187133 7 53.5 4142 FBgn0262975 1286.603333 24.08333333 36.96666667 0.041582358 2.221453287 1.447249775 1 1 1 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG 3R 23249504 23249509 - 3R_23249504_23249509_- 1 0.956221781 0.97811089 0.030955862 CG4449 FBtr0334499|FBtr0301088|FBtr0334500|FBtr0334501|FBtr0084388|FBtr0334502 23249441|23249441|23249441|23249441|23249441|23249441 23249591|23249591|23249591|23249591|23249591|23249591 3R - 23249465 23249523 3'utr CG4449 FlyBase G53633.1 ACGATTAGTTAATTGCTGTGCAAGATTTATTTTATTATCAAATGTTTCTATGTATGATT 18 23249511 0.987217436 6 16 146 0.863636364 1.278753601 0.136363636 0.222222222 0.363636364 18 3 0 19 3R:23249465-23249523 6 CG4449 FBtr0084388|FBtr0334502|FBtr0334500|FBtr0334501|FBtr0334499|FBtr0301088 23249441|23249441|23249441|23249441|23249441|23249441 23249591|23249591|23249591|23249591|23249591|23249591 GCTGTG 6mer2-7 dme-miR-1008-3p 3R - 23249464 23249529 3'utr CG4449 FlyBase G40539.1 TTGTTTACGATTAGTTAATTGCTGTGCAAGATTTATTTTATTATCAAATGTTTCTATGTATGATTG 7 23249511 0.986661514 3 7 76 1 1 0.2 0.428571429 0.6 7 0 0 10 3R:23249464-23249529 6 11.5 4143 FBgn0039065 314 25.55666667 39.02 0.036624204 0.449980436 0.294720656 2 2 2 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 23254605 23254611 + 3R_23254605_23254611_+ 0.801970437 0.801970437 0.801970437 0 EloA FBtr0084374|FBtr0084374|FBtr0084374|FBtr0084375|FBtr0084375|FBtr0084375 23254447|23254447|23254447|23254447|23254447|23254447 23255071|23255071|23255071|23255071|23255071|23255071 3R + 23254588 23254644 3'utr EloA FlyBase G44912.1 TCTGAATAAAGTGACATTGTGATACTAGACCTTCTACTTCCCAGTGCGCTGTGGAAT 30 23254604 0.652152423 5 28 193 0.918918919 1.054357662 0.135135135 0.133333333 0.297297297 30 1 2 34 3R:23254588-23254644 7 EloA FBtr0084374|FBtr0084374|FBtr0084374|FBtr0084375|FBtr0084375|FBtr0084375 23254447|23254447|23254447|23254447|23254447|23254447 23255071|23255071|23255071|23255071|23255071|23255071 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 23254584 23254634 3'utr EloA FlyBase G33930.1 CAGGTCTGAATAAAGTGACATTGTGATACTAGACCTTCTACTTCCCAGTGC 26 23254604 0.666304242 6 26 170 1 1.62324929 0.095238095 0.384615385 0.619047619 26 0 0 42 3R:23254584-23254634 7 26 4144 FBgn0039066 571.72 24.26333333 37.16333333 0.045476807 1.071575766 0.699614315 1 1 1 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG 3R 23254924 23254929 + 3R_23254924_23254929_+ 1 1 1 0 EloA FBtr0084374|FBtr0084375 23254447|23254447 23255071|23255071 3R + 23254904 23254967 3'utr EloA FlyBase G44914.1 AATGTTCTTTGTTCAAAAGGGCTGTGCGTATGTCCAAAATCATAGAGGTTCCAAGCTGTATATA 11 23254930 0.978636255 8 10 70 0.928571429 1.113943352 0.428571429 0.272727273 0.428571429 11 1 0 13 3R:23254904-23254967 6 EloA FBtr0084374|FBtr0084375 23254447|23254447 23255071|23255071 GCTGTG 6mer2-7 dme-miR-1008-3p 3R + 23254910 23254935 3'utr EloA FlyBase G33931.1 CTTTGTTCAAAAGGGCTGTGCGTATG 8 23254932 0.708355348 3 7 49 0.909090909 0.698970004 0.272727273 0.25 0.454545455 8 0 1 10 3R:23254910-23254935 6 8.5 4145 FBgn0039066 571.72 24.26333333 37.16333333 0.014867418 0.350322847 0.228720065 -6 -8 -7 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 23255452 23255457 - 3R_23255452_23255457_- 1 1 1 0 wda FBtr0084387 23255068 23255493 3R - 23255434 23255480 3'utr wda FlyBase G53644.1 AAGTTCAGCCCGAATTTAGACTTTCTAGTGACGACTTATGTTTGAAA 34 23255464 0.691882377 9 33 263 0.951219512 1.113943352 0.195121951 0.205882353 0.341463415 34 0 2 39 3R:23255434-23255480 6 wda FBtr0084387 23255068 23255493 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R - 23255426 23255479 3'utr wda FlyBase G40547.1 AGTTCAGCCCGAATTTAGACTTTCTAGTGACGACTTATGTTTGAAAATAATTTA 18 23255459 0.965605775 6 17 141 0.954545455 1.021189299 0.045454545 0.222222222 0.363636364 18 0 1 21 3R:23255426-23255479 6 26 4146 FBgn0039067 161 7.11 10.86333333 0.161490683 3.656821378 2.3933722 7 2 4.5 0.01 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3R 23263542 23263548 - 3R_23263542_23263548_- 0.620204031 0.620204031 0.620204031 0 orb FBtr0334498 23260608 23265852 3R - 23263525 23263562 3'utr orb FlyBase G53650.1 TTATACAGATAAAATGGTGCTTTAGCTGAATTATTAGT 15 23263541 0.652886182 3 15 115 1 1.204119983 0.0625 0.066666667 0.125 15 0 0 16 3R:23263525-23263562 7 orb FBtr0334498 23260608 23265852 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3R - 23263527 23263562 3'utr orb FlyBase G40552.1 TTATACAGATAAAATGGTGCTTTAGCTGAATTATTA 10 23263548 0.778724095 3 9 78 0.941176471 1.204119983 0.176470588 0.5 0.705882353 10 1 0 16 3R:23263527-23263562 7 12.5 4147 FBgn0004882 75.63666667 1.15 1.746666667 0.165263761 10.86956522 7.15648855 -7 0 -3.5 0.01 dme-miR-305-5p 6mer2-7 GTACAA 3R 23290675 23290680 - 3R_23290675_23290680_- 1 1 1 0 pnt FBtr0334554|FBtr0089717 23290229|23290229 23291364|23291364 3R - 23290668 23290778 3'utr pnt FlyBase G53657.2 ATTTCAAAATCATGCATGTATATAGCGTTGAAGATGTGAATGGCATATAAGTAGGTCTCTAGTATTTATGTATGTCTAAATTGTAATCTGTGCTACTGGTACAACTAAGTT 87 23290691 0.984049129 18 85 667 0.982608696 1.752048448 0.095652174 0.24137931 0.426086957 87 1 1 113 3R:23290668-23290778 6 pnt FBtr0334554|FBtr0089717 23290229|23290229 23291364|23291364 GTACAA 6mer2-7 dme-miR-305-5p 3R - 23290668 23290711 3'utr pnt FlyBase G40555.1 ATGTATGTCTAAATTGTAATCTGTGCTACTGGTACAACTAAGTT 41 23290691 0.735423484 4 36 330 0.914285714 1.806179974 0.042857143 0.43902439 0.671428571 41 6 0 64 3R:23290668-23290711 6 43.5 4148 FBgn0003118 3507.63 110.36 169.3033333 0.012401536 0.394164552 0.256935284 11 11 11 0.01 dme-miR-283-5p 8mer-A1 TGATATTA 3R 23290837 23290844 - 3R_23290837_23290844_- 0.592192292 0.592192292 0.592192292 0 pnt FBtr0334554|FBtr0089717 23290229|23290229 23291364|23291364 3R - 23290818 23290890 3'utr pnt FlyBase G53659.1 AGGATCGAACGTTGATAGAGGCCATAAAGCATGTGTCCCCCAAAAGTGATATTAGAGCGCAACATTTTGTTAT 51 23290839 0.96504244 9 49 258 0.931034483 1.255272505 0.24137931 0.137254902 0.24137931 51 2 2 54 3R:23290818-23290890 8 pnt FBtr0334554|FBtr0089717 23290229|23290229 23291364|23291364 TGATATTA 8mer-A1 dme-miR-283-5p 3R - 23290825 23290893 3'utr pnt FlyBase G40556.1 GCAAGGATCGAACGTTGATAGAGGCCATAAAGCATGTGTCCCCCAAAAGTGATATTAGAGCGCAACATT 29 23290839 0.913230742 9 26 142 0.894736842 1.531478917 0.184210526 0.24137931 0.421052632 29 4 0 34 3R:23290825-23290893 8 33.5 4149 FBgn0003118 3507.63 110.36 169.3033333 0.009550608 0.303552012 0.197869701 -5 -5 -5 0.01 dme-miR-31a-5p 6mer3-8 TCTTGC 3R 23291205 23291210 - 3R_23291205_23291210_- 1 1 1 0 pnt FBtr0334554|FBtr0089717 23290229|23290229 23291364|23291364 3R - 23291189 23291426 stop_codon pnt FlyBase G53661.1 ACACACCCGAGGAGCTGGTGGCCAAGTATGATCTTAAGATTGAGAAAAAAGATGTGGATTAGCAGCGGAGCAGCGGAGAAGCTGCCTAAAACGGGAACAGCTCCAGGAGATCTGCGCCCAGCCACGGATTGTACTCAACCAACCGCAAAATACTTTCGAGCGTTATTGTTTACCAAGCGTGATGTTAGCTTTTAAGCAGCTACCCCCGATCTGCGATCTTGCAACGAGATTAAAGTGT 2053 23291217 0.880735074 45 2001 11930 0.976993257 2.350071727 0.213407378 0.172917681 0.326457755 2053 48 10 2463 3R:23291189-23291426 6 pnt FBtr0334554|FBtr0089717 23290229|23290229 23291364|23291364 TCTTGC 6mer3-8 dme-miR-31a-5p 3R - 23291182 23291425 stop_codon pnt FlyBase G40558.1 CACACCCGAGGAGCTGGTGGCCAAGTATGATCTTAAGATTGAGAAAAAAGATGTGGATTAGCAGCGGAGCAGCGGAGAAGCTGCCTAAAACGGGAACAGCTCCAGGAGATCTGCGCCCAGCCACGGATTGTACTCAACCAACCGCAAAATACTTTCGAGCGTTATTGTTTACCAAGCGTGATGTTAGCTTTTAAGCAGCTACCCCCGATCTGCGATCTTGCAACGAGATTAAAGTGTTGGCCAA 1586 23291217 0.9721947 50 1549 9157 0.976355483 2.379305518 0.189971464 0.365069357 0.589482267 1586 49 9 2395 3R:23291182-23291425 6 893 4150 FBgn0003118 3507.63 110.36 169.3033333 0.254587856 8.091699891 5.274556516 7 7 7 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 23605903 23605908 - 3R_23605903_23605908_- 1 1 1 0 CG31145 FBtr0290056|FBtr0336459 23605749|23605749 23606850|23606850 3R - 23605824 23605930 3'utr CG31145 FlyBase G53713.1 ATTATTGTAACGTTTTTCAATTGTACCTTGAGTGGTTGAGATAGAGATCATTGATTGGCCAAGAAAAGAAAAAGTGACAGGTGAATTGAGTGTGAAAACTATGAGAA 123 23605909 0.824246802 19 117 1115 0.953642384 2.158362492 0.21192053 0.195121951 0.344370861 123 7 0 144 3R:23605824-23605930 6 CG31145 FBtr0336459|FBtr0290056 23605749|23605749 23606850|23606850 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 23605873 23605925 3'utr CG31145 FlyBase G40604.1 TGTAACGTTTTTCAATTGTACCTTGAGTGGTTGAGATAGAGATCATTGATTGG 61 23605909 0.792026983 6 58 586 0.947916667 1.959041392 0.239583333 0.409836066 0.625 61 5 0 91 3R:23605873-23605925 6 81 4151 FBgn0051145 14.00333333 0.44 0.683333333 5.784337063 184.0909091 118.5365854 1 1 1 0.01 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 23606086 23606093 - 3R_23606086_23606093_- 0.625364009 0.625364009 0.625364009 0 CG31145 FBtr0290056|FBtr0336459 23605749|23605749 23606850|23606850 3R - 23606057 23606154 3'utr CG31145 FlyBase G53715.1 AAGAAAAGTTGTTGCAAGTTTAGTTCGTAAGTTGACCTAACATTATGATCGATATCAGGCGTAGCTTTATCCGATTCAAGGATCGTCTTATTAGTTAG 25 23606109 0.991081207 11 21 218 0.870967742 1.431363764 0.161290323 0.2 0.35483871 25 4 0 27 3R:23606057-23606154 8 CG31145 FBtr0336459|FBtr0290056 23605749|23605749 23606850|23606850 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R - 23606058 23606137 3'utr CG31145 FlyBase G40606.1 GTTTAGTTCGTAAGTTGACCTAACATTATGATCGATATCAGGCGTAGCTTTATCCGATTCAAGGATCGTCTTATTAGTTA 17 23606088 0.88962346 11 16 122 0.875 1.322219295 0.416666667 0.352941176 0.541666667 17 3 0 21 3R:23606058-23606137 8 10 4152 FBgn0051145 14.00333333 0.44 0.683333333 0.714115687 22.72727273 14.63414634 16 -5 5.5 0.01 dme-miR-190-5p 6mer3-8 ACATAT 3R 23606215 23606220 - 3R_23606215_23606220_- 1 1 1 0 CG31145 FBtr0290056|FBtr0336459 23605749|23605749 23606850|23606850 3R - 23606200 23606240 3'utr CG31145 FlyBase G53716.1 GCATACATTTTATGACTTTTACATATACACTTTTGCATACA 20 23606222 0.722443994 6 18 196 0.888888889 1.380211242 0.037037037 0.25 0.444444444 20 3 0 24 3R:23606200-23606240 6 CG31145 FBtr0336459|FBtr0290056 23605749|23605749 23606850|23606850 ACATAT 6mer3-8 dme-miR-190-5p 3R - 23606206 23606234 3'utr CG31145 FlyBase G40607.1 ATTTTATGACTTTTACATATACACTTTTG 11 23606222 0.757130274 2 11 112 1 1.146128036 0 0.272727273 0.428571429 11 0 0 14 3R:23606206-23606234 6 15.5 4153 FBgn0051145 14.00333333 0.44 0.683333333 1.106879314 35.22727273 22.68292683 2 2 2 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 3R 23689038 23689043 - 3R_23689038_23689043_- 1 1 1 0 CG10254 FBtr0084476|FBtr0084477|FBtr0334770 23689005|23689005|23689005 23689528|23689528|23689528 3R - 23689028 23689117 3'utr CG10254 FlyBase G53728.1 ACCTAGCTTAGTTAGTCCATCCCACGTCCAATCAGCACCATGTACGTAATATTGTAAGCTAGCCAATGCGAGAAATGTGAATAAACTAGC 18 23689036 0.94616622 6 18 80 1 1.322219295 0.238095238 0.166666667 0.285714286 18 0 0 21 3R:23689028-23689117 6 CG10254 FBtr0334770|FBtr0084477|FBtr0084476 23689005|23689005|23689005 23689528|23689528|23689528 ATGTGA 6mer3-8 dme-miR-1003-3p 3R - 23689019 23689114 3'utr CG10254 FlyBase G40615.1 TAGCTTAGTTAGTCCATCCCACGTCCAATCAGCACCATGTACGTAATATTGTAAGCTAGCCAATGCGAGAAATGTGAATAAACTAGCAATTTTATT 10 23689039 0.975844865 7 8 57 0.785714286 1.041392685 0 0.3 0.5 10 3 0 11 3R:23689019-23689114 6 7.5 4154 FBgn0027512 468.9733333 11.51 17.61333333 0.015992381 0.651607298 0.425813777 -7 -4 -5.5 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3R 23689465 23689470 - 3R_23689465_23689470_- 1 1 1 0 CG10254 FBtr0084476|FBtr0084477|FBtr0334770 23689005|23689005|23689005 23689528|23689528|23689528 3R - 23689358 23689528 3'utr CG10254 FlyBase G53730.2 TTGCCACTCATCCTGGCCAGCGTATGCCTATGAAAATGGTGCCTATCAGAAGAACCACAAGACTTTTGCCGCCTGCGTTTTGGGAGTCTGATCTGGCCCTCGGCAAGTGTCAGCGTTTTATAGCCCCTATCTCGAATCTCGAATTTCTATCCGCTCGTATTGCTGGCAGAC 122 23689463 0.967300405 16 114 619 0.955223881 2.10720997 0.134328358 0.098360656 0.179104478 122 6 0 128 3R:23689358-23689528 6 CG10254 FBtr0334770|FBtr0084477|FBtr0084476 23689005|23689005|23689005 23689528|23689528|23689528 AAGACT 6mer3-8 dme-miR-14-3p 3R - 23689442 23689499 3'utr CG10254 FlyBase G40617.2 ATGAAAATGGTGCCTATCAGAAGAACCACAAGACTTTTGCCGCCTGCGTTTTGGGAGT 73 23689463 0.983629668 4 69 270 1 2.004321374 0.079207921 0.287671233 0.485148515 73 0 0 101 3R:23689442-23689499 6 75 4155 FBgn0027512 468.9733333 11.51 17.61333333 0.159923805 6.51607298 4.258137774 -7 -7 -7 0.01 dme-miR-318-3p 8mer-A1 CCCAGTGA 3R 23712878 23712885 - 3R_23712878_23712885_- 0.678004647 0.678004647 0.678004647 0 nau FBtr0301445|FBtr0084472 23712812|23712812 23712945|23712945 3R - 23712822 23712919 3'utr nau FlyBase G53743.1 TTGTAAAGCTATTTTTAAGAGGATACACGAGATACCCAGTGACCCGAATAGGCCTTAAATTATTTGTATAGCATTAGAACTTAATTAAATGGTAATTC 48 23712880 0.948735073 10 48 213 1 1.73239376 0.37037037 0.083333333 0.185185185 48 0 0 54 3R:23712822-23712919 8 nau FBtr0301445|FBtr0084472 23712812|23712812 23712945|23712945 CCCAGTGA 8mer-A1 dme-miR-318-3p 3R - 23712859 23712903 3'utr nau FlyBase G40621.1 AAGAGGATACACGAGATACCCAGTGACCCGAATAGGCCTTAAATT 30 23712880 0.958694621 3 30 94 1 1.62324929 0.547619048 0.333333333 0.523809524 30 0 0 42 3R:23712859-23712903 8 35 4156 FBgn0002922 0 0 0 Inf Inf Inf -5 -5 -5 0.01 dme-miR-965-3p 7mer-m8 TACGCTT 3R 23751032 23751038 - 3R_23751032_23751038_- 0.620204855 0.620204855 0.620204855 0 RanBP3 FBtr0084468|FBtr0335003 23750935|23750935 23751241|23751241 3R - 23751016 23751096 3'utr RanBP3 FlyBase G53777.1 TAAATGAAGTGCTGATTTGTAAACCCGTGAGCAGCGTCGACAAAAGACATTTATCCATTACGCTTTGTGTTTATAATTTTT 43 23751039 0.816579694 9 42 443 0.97826087 1.653212514 0.130434783 0.069767442 0.130434783 43 1 0 45 3R:23751016-23751096 7 RanBP3 FBtr0084468|FBtr0335003 23750935|23750935 23751241|23751241 TACGCTT 7mer-m8 dme-miR-965-3p 3R - 23751010 23751053 3'utr RanBP3 FlyBase G40651.1 AAGACATTTATCCATTACGCTTTGTGTTTATAATTTTTTGTTAA 31 23751039 0.806933956 6 30 375 0.975609756 1.602059991 0.048780488 0.258064516 0.43902439 31 1 0 40 3R:23751010-23751053 7 33 4157 FBgn0039110 582.3333333 40.28333333 61.80666667 0.056668575 0.819197352 0.533922986 1 1 1 0.01 dme-miR-2535b-3p 6mer3-8 CCGTGA 3R 23751153 23751158 - 3R_23751153_23751158_- 1 1 1 0 RanBP3 FBtr0084468|FBtr0335003 23750935|23750935 23751241|23751241 3R - 23751130 23751169 3'utr RanBP3 FlyBase G53778.1 AATAAAGCGCGCCGTGAATTATTATAAATTAATTATAATA 18 23751151 0.699861215 3 18 104 1 1.301029996 0 0.111111111 0.2 18 0 0 20 3R:23751130-23751169 6 RanBP3 FBtr0084468|FBtr0335003 23750935|23750935 23751241|23751241 CCGTGA 6mer3-8 dme-miR-2535b-3p 3R - 23751127 23751170 3'utr RanBP3 FlyBase G40653.1 TAATAAAGCGCGCCGTGAATTATTATAAATTAATTATAATAATT 11 23751151 0.965914021 3 11 66 1 1.146128036 0 0.272727273 0.428571429 11 0 0 14 3R:23751127-23751170 6 14 4158 FBgn0039110 582.3333333 40.28333333 61.80666667 0.024041214 0.347538271 0.226512782 -7 -7 -7 0.01 dme-miR-277-3p 6mer3-8 TGCATT 3R 23766619 23766624 - 3R_23766619_23766624_- 0.999998896 1 0.999999448 7.78E-07 CG10214 FBtr0084463 23766517 23766762 3R - 23766606 23766658 3'utr CG10214 FlyBase G53807.1 TTAAGCGTGAAGTTAGGCTTATATTATTGACAAATGCATTATGTTAAAAATAG 7 23766621 0.772515822 4 7 58 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 3R:23766606-23766658 6 CG10214 FBtr0084463 23766517 23766762 TGCATT 6mer3-8 dme-miR-277-3p 3R - 23766605 23766647 3'utr CG10214 FlyBase G40674.1 GTTAGGCTTATATTATTGACAAATGCATTATGTTAAAAATAGA 6 23766620 0.975642283 3 6 51 1 1 0.2 0.5 0.7 6 0 0 10 3R:23766605-23766647 6 5 4159 FBgn0039115 91.23333333 11.91333333 18.33 0.054804531 0.419697818 0.272776869 -3 -4 -3.5 0.01 dme-miR-263a-5p 6mer3-8 GTGCCA 3R 23800840 23800845 + 3R_23800840_23800845_+ 1 1 1 0 mbc FBtr0304729|FBtr0084459 23800770|23800770 23801634|23801634 3R + 23800757 23800851 stop_codon mbc FlyBase G45059.1 AAACACATTCCATAGGGTAGCGAGGGGCATCTTTGAACCCCAGAAGCTTCAGTGCAGCGCCATATATGTTCAAACGTTGTCGAGTGCCAAATATT 16 23800841 0.90357433 8 15 67 0.944444444 1.230448921 0.222222222 0.125 0.222222222 16 1 0 17 3R:23800757-23800851 6 mbc FBtr0304729|FBtr0084459 23800770|23800770 23801634|23801634 GTGCCA 6mer3-8 dme-miR-263a-5p 3R + 23800790 23800857 3'utr mbc FlyBase G34027.1 TGAACCCCAGAAGCTTCAGTGCAGCGCCATATATGTTCAAACGTTGTCGAGTGCCAAATATTCCTGTT 10 23800841 0.974542709 5 9 63 0.9375 1.176091259 0.125 0.5 0.6875 10 1 0 15 3R:23800790-23800857 6 6 4160 FBgn0015513 1872.666667 30.72333333 47.18666667 0.003203987 0.19529131 0.127154563 -1 -1 -1 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 3R 23801962 23801968 - 3R_23801962_23801968_- 0.620204266 0.620204266 0.620204266 0 CG33111 FBtr0334893|FBtr0334892 23801712|23801712 23806477|23802226 3R - 23801905 23802038 3'utr CG33111 FlyBase G53860.1 TCACGCCCACTCTCTTACACCTTGGTCTCAAATCTCAGGACCCTGCTGTCCCTGAACAACGAACATTCCGTGCATTTTCAAACCGTATTATTGTGTGCCTTTTCAAGGATGAAACTGAAGCCATTTTAAAATTT 177 23801973 0.980097687 14 174 1219 0.990147783 2.002166062 0.054187192 0.141242938 0.251231527 177 1 1 201 3R:23801905-23802038 7 CG33111 FBtr0334893|FBtr0084530|FBtr0084529|FBtr0334892|FBtr0100312 23801712|23801712|23801712|23801712|23801712 23806477|23802056|23802056|23802226|23802056 TGCATTT 7mer-m8 dme-miR-277-3p 3R - 23801917 23802036 3'utr CG33111 FlyBase G40705.1 ACGCCCACTCTCTTACACCTTGGTCTCAAATCTCAGGACCCTGCTGTCCCTGAACAACGAACATTCCGTGCATTTTCAAACCGTATTATTGTGTGCCTTTTCAAGGATGAAACTGAAGCC 108 23801973 0.96128777 11 106 715 0.987341772 2.193124598 0.063291139 0.296296296 0.518987342 108 2 0 156 3R:23801917-23802036 7 94 4161 FBgn0053111 182.5533333 9.853333333 15.05 0.514918015 9.539918809 6.245847176 5 5 5 0.01 dme-miR-980-5p 8mer-A1 GAAAAACA 3R 23808994 23809001 - 3R_23808994_23809001_- 0.639822573 0.639886926 0.639854749 4.55E-05 eIF4G2 FBtr0344335 23808283 23810293 3R - 23808951 23808998 5'utr eIF4G2 FlyBase G53861.1 AAACAAAAGCAAATCAATCTCATAAATTTATATATAAAATATTTAAAG 38 23808985 0.987698966 4 34 293 0.902439024 1.568201724 0.024390244 0.052631579 0.12195122 38 4 0 37 3R:23808951-23808998 5 eIF4G2 FBtr0344335 23808283 23810293 GAAAAACA 8mer-A1 dme-miR-980-5p 3R - 23808955 23808997 5'utr eIF4G2 FlyBase G40706.1 AACAAAAGCAAATCAATCTCATAAATTTATATATAAAATATTT 14 23808985 0.978521478 5 13 107 0.909090909 1.301029996 0 0.428571429 0.636363636 14 2 0 20 3R:23808955-23808997 4 9 4162 FBgn0260634 1847.216667 30.65 47.06666667 0.004872195 0.293637847 0.19121813 -16 -16 -16 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 23809228 23809234 - 3R_23809228_23809234_- 0.823349562 0.823349562 0.823349562 0 eIF4G2 FBtr0344335 23808283 23810293 3R - 23809202 23809282 5'utr eIF4G2 FlyBase G53863.1 AAAATTCGTAAAGACATGTAAAGTATTTAGCACACAAAGCATGATTATCCAAAGATAAATCTTAAAATTAGCTGTAAAAAG 47 23809238 0.694930987 13 42 273 0.890909091 1.69019608 0.036363636 0.14893617 0.272727273 47 6 0 49 3R:23809202-23809282 7 eIF4G2 FBtr0344335 23808283 23810293 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 23809207 23809270 5'utr eIF4G2 FlyBase G40707.1 GACATGTAAAGTATTTAGCACACAAAGCATGATTATCCAAAGATAAATCTTAAAATTAGCTGTA 23 23809238 0.982911985 8 18 143 0.84375 1.431363764 0.03125 0.304347826 0.5 23 5 0 27 3R:23809207-23809270 7 26 4163 FBgn0260634 1847.216667 30.65 47.06666667 0.01407523 0.848287113 0.552407932 4 4 4 0.01 dme-miR-305-5p 8mer-A1 AGTACAAA 3R 23809542 23809549 - 3R_23809542_23809549_- 0.605654138 0.605654138 0.605654138 0 eIF4G2 FBtr0344335 23808283 23810293 3R - 23809465 23809594 5'utr eIF4G2 FlyBase G53865.1 ATACTTTTCTAGACTTTAAACAGAATTTTGTTTATTTTACCTTTCAGTACAAAGCATTATGAACTTCGTTTTGTTTGATTTTTTATAAAGAACTACCAACATTGATTTACCTATTTTCTATGCGAATGGC 83 23809551 0.987385384 12 80 715 0.970588235 1.694605199 0.029411765 0.192771084 0.343137255 83 2 1 99 3R:23809465-23809594 8 eIF4G2 FBtr0344335 23808283 23810293 AGTACAAA 8mer-A1 dme-miR-305-5p 3R - 23809518 23809592 5'utr eIF4G2 FlyBase G40709.1 ACTTTTCTAGACTTTAAACAGAATTTTGTTTATTTTACCTTTCAGTACAAAGCATTATGAACTTCGTTTTGTTTG 44 23809552 0.988108518 8 40 370 0.918032787 1.447158031 0.016393443 0.295454545 0.491803279 44 4 1 56 3R:23809518-23809592 8 57.5 4164 FBgn0260634 1847.216667 30.65 47.06666667 0.031127913 1.876019576 1.221671388 2 3 2.5 0.01 dme-miR-190-5p 6mer3-8 ACATAT 3R 23809684 23809689 - 3R_23809684_23809689_- 1 1 1 0 eIF4G2 FBtr0344335 23808283 23810293 3R - 23809634 23809802 5'utr eIF4G2 FlyBase G53866.1 GCAAAACTATGTAAAACTGAACCTACGATGCCGAAAAATATTTTGAAGAAATCAAATTCTGACAATGCCTTACCCAATGTGAACTGGGTATAGAAATATATTTATGTATATTTACATATGGACTATTAATTTTTGTAAACTCACAGTATTTCGTTAAACATTAAAATTA 126 23809684 0.919760887 28 119 1100 0.947712418 1.684246748 0.104575163 0.174603175 0.320261438 126 6 2 145 3R:23809634-23809802 6 eIF4G2 FBtr0344335 23808283 23810293 ACATAT 6mer3-8 dme-miR-190-5p 3R - 23809635 23809708 5'utr eIF4G2 FlyBase G40710.1 AATATATTTATGTATATTTACATATGGACTATTAATTTTTGTAAACTCACAGTATTTCGTTAAACATTAAAATT 54 23809684 0.83319595 10 51 541 0.93902439 1.58546073 0.048780488 0.462962963 0.646341463 54 4 1 77 3R:23809635-23809708 6 57.5 4165 FBgn0260634 1847.216667 30.65 47.06666667 0.031127913 1.876019576 1.221671388 -5 -5 -5 0.01 dme-miR-307a-3p 6mer2-7 GTTGTG 3R 23861160 23861165 - 3R_23861160_23861165_- 0.999999978 1 0.999999989 0 Pli FBtr0112907 23860160 23861378 3R - 23861138 23861176 3'utr Pli FlyBase G53894.1 ATGTTGTATTTGTTGTGTCTCTGGCTGCTATAGTTTTGC 10 23861155 0.775691367 3 10 96 1 1.079181246 0.666666667 0.2 0.333333333 10 0 0 12 3R:23861138-23861176 6 Pli FBtr0112907 23860160 23861378 GTTGTG 6mer2-7 dme-miR-307a-3p 3R - 23861132 23861174 3'utr Pli FlyBase G40729.1 GTTGTATTTGTTGTGTCTCTGGCTGCTATAGTTTTGCATTATT 6 23861155 0.820905686 3 6 64 1 1 0.3 0.5 0.7 6 0 0 10 3R:23861132-23861174 6 7.5 4166 FBgn0025574 312.3333333 15.25 23.34666667 0.024012807 0.491803279 0.321245003 -10 -10 -10 0.01 dme-miR-252-5p 6mer3-8 GTACTT 3R 23926479 23926484 - 3R_23926479_23926484_- 1 1 1 0 CG13601 FBtr0084522|FBtr0330369 23926370|23926370 23926628|23926562 3R - 23926478 23926590 stop_codon CG13601 FlyBase G53920.1 GATGGCAGTGGCGATGGAGGAACAGTAAGGCCGCCCGCTTGTACACATTCAACCTGCAGACCATTTCATCAGTGCTAGTTATGATCAAATCGCGTGTTACCATTTCGTACTTT 16 23926495 0.948123452 10 15 96 0.95 0.977723605 0.2 0.125 0.3 16 0 1 19 3R:23926478-23926590 6 CG13601 FBtr0330369|FBtr0084522 23926370|23926370 23926562|23926628 GTACTT 6mer3-8 dme-miR-252-5p 3R - 23926473 23926533 3'utr CG13601 FlyBase G40741.1 AGACCATTTCATCAGTGCTAGTTATGATCAAATCGCGTGTTACCATTTCGTACTTTAAGTA 12 23926509 0.718262507 7 11 91 0.947368421 1.255272505 0.052631579 0.5 0.684210526 12 1 0 18 3R:23926473-23926533 6 3 4167 FBgn0039126 158.33 17.96666667 27.49333333 0.018947767 0.166975881 0.109117362 11 25 18 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 3R 23936062 23936068 - 3R_23936062_23936068_- 0.620204266 0.620204266 0.620204266 0 Gdh FBtr0089497|FBtr0335205|FBtr0089498|FBtr0089496 23935956|23935956|23935956|23935956 23936373|23936373|23936373|23936373 3R - 23935999 23936144 3'utr Gdh FlyBase G53934.1 AAGTTGAACAAGTTGCGAGCTTATTATTGTTGATTTTCTGTAATTTTTAAGTTAATGAGCGTCAAAGTGAAGCAATTGCATTTTCAATTATGTATCGCAACGTCTCGTACCGTCAAGTCACGTTTATCGTACGATCGCTCCGTTGC 51 23936069 0.989068525 16 47 447 0.935483871 1.286306739 0.403225806 0.156862745 0.306451613 51 2 2 58 3R:23935999-23936144 7 Gdh FBtr0089498|FBtr0089496|FBtr0089497|FBtr0335205 23935956|23935956|23935956|23935956 23936373|23936373|23936373|23936373 TGCATTT 7mer-m8 dme-miR-277-3p 3R - 23936035 23936091 3'utr Gdh FlyBase G40748.1 AATGAGCGTCAAAGTGAAGCAATTGCATTTTCAATTATGTATCGCAACGTCTCGTAC 14 23936069 0.987019837 3 11 103 0.714285714 0.875061263 0 0.428571429 0.619047619 14 5 1 15 3R:23936035-23936091 7 13 4168 FBgn0001098 137.9033333 7.62 11.54666667 0.094268932 1.706036745 1.125866051 1 1 1 0.01 dme-miR-1007-3p 7mer-A1 GAGCTTA 3R 23936122 23936128 - 3R_23936122_23936128_- 0.823349562 0.823349562 0.823349562 0 Gdh FBtr0089497|FBtr0335205|FBtr0089498|FBtr0089496 23935956|23935956|23935956|23935956 23936373|23936373|23936373|23936373 3R - 23935999 23936144 3'utr Gdh FlyBase G53934.1 AAGTTGAACAAGTTGCGAGCTTATTATTGTTGATTTTCTGTAATTTTTAAGTTAATGAGCGTCAAAGTGAAGCAATTGCATTTTCAATTATGTATCGCAACGTCTCGTACCGTCAAGTCACGTTTATCGTACGATCGCTCCGTTGC 51 23936118 0.989068525 16 47 447 0.935483871 1.286306739 0.403225806 0.156862745 0.306451613 51 2 2 58 3R:23935999-23936144 7 Gdh FBtr0089498|FBtr0089496|FBtr0089497|FBtr0335205 23935956|23935956|23935956|23935956 23936373|23936373|23936373|23936373 GAGCTTA 7mer-A1 dme-miR-1007-3p 3R - 23936107 23936172 3'utr Gdh FlyBase G40749.1 AAGCGAACTTTCGCCCGTGTTTCGTATTAAGTTGAACAAGTTGCGAGCTTATTATTGTTGATTTTC 17 23936118 0.811802963 5 16 152 0.903225806 1.447158031 0.322580645 0.529411765 0.741935484 17 3 0 28 3R:23936107-23936172 7 17 4169 FBgn0001098 137.9033333 7.62 11.54666667 0.123274758 2.230971129 1.472286374 -10 -10 -10 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 3R 23936329 23936334 - 3R_23936329_23936334_- 1 1 1 0 Gdh FBtr0089497|FBtr0335205|FBtr0089498|FBtr0089496 23935956|23935956|23935956|23935956 23936373|23936373|23936373|23936373 3R - 23936267 23936449 stop_codon Gdh FlyBase G53936.1 CCTCAGAACCGCTGCCTACGTCAACTCCATTGAGAAGATCTTCACCACATACCGCGATGCCGGCCTGGCCTTCTAAGCCCGCTGAGTGTGCTGATTAGCCCCCAGACTCTTAACTAGTTAATTAAGCAATCGAACTCAAGAGCATAACTATTGCTATTGCTCCATGCACCGCCGTCTTAGATG 63 23936339 0.956534762 19 63 321 1 1.86332286 0.123287671 0.126984127 0.246575342 63 0 0 73 3R:23936267-23936449 6 Gdh FBtr0089498|FBtr0089496|FBtr0089497|FBtr0335205 23935956|23935956|23935956|23935956 23936373|23936373|23936373|23936373 AGTTAA 6mer3-8 dme-miR-999-3p 3R - 23936310 23936410 stop_codon Gdh FlyBase G40751.1 CTTCACCACATACCGCGATGCCGGCCTGGCCTTCTAAGCCCGCTGAGTGTGCTGATTAGCCCCCAGACTCTTAACTAGTTAATTAAGCAATCGAACTCAAG 29 23936356 0.969188146 12 26 144 0.960784314 1.69019608 0.117647059 0.482758621 0.705882353 29 2 0 49 3R:23936310-23936410 6 15.5 4170 FBgn0001098 137.9033333 7.62 11.54666667 0.112397573 2.034120735 1.342378753 5 22 13.5 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3R 23961085 23961091 + 3R_23961085_23961091_+ 0.521223855 0.521223855 0.521223855 0 AP-1sigma FBtr0305039 23960941 23961504 3R + 23961048 23961166 5'utr AP-1sigma FlyBase G45096.1 TTTACAGCACTGCTCCATCCACTCCTCAACACTAGTGTGTGATTTGGCTGTTGTACAGCACTGAAGCGCTGAAAAAAAAATTATAAGCAAGAAGACGCCAAGCAGCGTGAGGCTCCAAA 23 23961091 0.999506114 8 22 171 0.961538462 1.096910013 0.230769231 0.086956522 0.192307692 23 0 1 25 3R:23961048-23961166 7 AP-1sigma FBtr0305040|FBtr0305039 23960941|23960941 23961118|23961504 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 23961064 23961110 5'utr AP-1sigma FlyBase G34061.1 ATCCACTCCTCAACACTAGTGTGTGATTTGGCTGTTGTACAGCACTG 15 23961091 0.699287916 4 14 144 0.904761905 0.801632346 0.523809524 0.4 0.571428571 15 0 2 19 3R:23961064-23961110 7 14.5 4171 FBgn0039132 832.4666667 93.19333333 142.7733333 0.017418115 0.155590529 0.101559582 -6 -6 -6 0.01 dme-miR-79-3p 7mer-A1 AGCTTTA 3R 23961445 23961451 + 3R_23961445_23961451_+ 0.823349562 0.823349562 0.823349562 0 AP-1sigma FBtr0305039 23960941 23961504 3R + 23961369 23961464 3'utr AP-1sigma FlyBase G45097.1 AATCAATCACCAAATGGGCAATAACTAATTTAGTGGGGAAATATATGCAATACTATTCTTACAATAGAAACATGTAAGCTTTAATGTTGATTAAAT 23 23961443 0.986945063 6 22 158 0.962962963 1.414973348 0.259259259 0.173913043 0.296296296 23 1 0 26 3R:23961369-23961464 7 AP-1sigma FBtr0305039 23960941 23961504 AGCTTTA 7mer-A1 dme-miR-79-3p 3R + 23961430 23961464 3'utr AP-1sigma FlyBase G34062.2 CAATAGAAACATGTAAGCTTTAATGTTGATTAAAT 20 23961443 0.792994006 5 19 137 0.933333333 1.447158031 0.433333333 0.5 0.666666667 20 2 0 28 3R:23961430-23961464 7 18 4172 FBgn0039132 832.4666667 93.19333333 142.7733333 0.021622487 0.193146863 0.126073963 2 2 2 0.01 dme-miR-980-5p 7mer-A1 AAAAACA 3R 23962235 23962241 + 3R_23962235_23962241_+ 0.782911824 0.782911824 0.782911824 0 AP-1sigma FBtr0084496 23962094 23962555 3R + 23962165 23962300 3'utr AP-1sigma FlyBase G45100.1 TGTATGTGTATTTAACGTAACCCAAAAGTATACCGGTTCTATTGTAATTTAACCACCCTGTGTCAGCATAAAAAACATTGTGTATAGAAGTGCTGTTAAACCTATTCCTAATTTCGCTTGGCAAATGCAATTTGCA 28 23962243 0.984181276 12 25 199 0.904761905 1.579783597 0.30952381 0.321428571 0.547619048 28 4 0 38 3R:23962165-23962300 7 AP-1sigma FBtr0084496 23962094 23962555 AAAAACA 7mer-A1 dme-miR-980-5p 3R + 23962211 23962293 3'utr AP-1sigma FlyBase G34065.1 ATTTAACCACCCTGTGTCAGCATAAAAAACATTGTGTATAGAAGTGCTGTTAAACCTATTCCTAATTTCGCTTGGCAAATGCA 13 23962242 0.828330835 6 12 84 0.941176471 1.204119983 0 0.230769231 0.411764706 13 1 0 16 3R:23962211-23962293 7 7 4173 FBgn0039132 832.4666667 93.19333333 142.7733333 0.008408745 0.075112669 0.049028764 -8 -7 -7.5 0.01 dme-miR-283-5p 6mer3-8 TGATAT 3R 23985283 23985288 - 3R_23985283_23985288_- 1 1 1 0 CG13603 FBtr0084510 23985211 23985472 3R - 23985262 23985402 3'utr CG13603 FlyBase G53976.1 TTGTATGTCATTTCGTCCTCGTCCTTATCATTGAGGCAGACAACCGGCAACACACATTATCTTTGTAGTGAAGGAAACTAGAGATATTAGCCCTATGTATTAAGCCAACATACGTGATATGTAATGTATATATATATATAT 243 23985292 0.9453854 18 232 1175 0.956140351 1.815577748 0.023391813 0.271604938 0.48245614 243 11 4 327 3R:23985262-23985402 6 CG13603 FBtr0084510 23985211 23985472 TGATAT 6mer3-8 dme-miR-283-5p 3R - 23985268 23985321 3'utr CG13603 FlyBase G40779.1 AGATATTAGCCCTATGTATTAAGCCAACATACGTGATATGTAATGTATATATAT 167 23985292 0.889342987 12 161 764 0.960854093 2.431363764 0.039145907 0.431137725 0.661921708 167 11 0 270 3R:23985268-23985321 6 194.5 4174 FBgn0039135 277 32.77 49.89333333 0.702166065 5.935306683 3.898316408 4 4 4 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 23985459 23985464 - 3R_23985459_23985464_- 1 1 1 0 CG13603 FBtr0084510|FBtr0084510|FBtr0084510 23985211|23985211|23985211 23985472|23985472|23985472 3R - 23985404 23985481 stop_codon CG13603 FlyBase G53977.1 AACAAATAGTTGACGTTTGTGATCAATCAGCAGCAGTTTGTAATTCTCTACGTATTTCTCATCATGTGCGTTATAATC 62 23985465 0.984361879 11 57 454 0.9 1.857332496 0.1375 0.225806452 0.4 62 8 0 72 3R:23985404-23985481 6 CG13603 FBtr0084510|FBtr0084510|FBtr0084510 23985211|23985211|23985211 23985472|23985472|23985472 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 23985354 23985483 stop_codon CG13603 FlyBase G40780.1 AGAACAAATAGTTGACGTTTGTGATCAATCAGCAGCAGTTTGTAATTCTCTACGTATTTCTCATCATGTGCGTTATAATCATTGTATGTCATTTCGTCCTCGTCCTTATCATTGAGGCAGACAACCGGCA 44 23985465 0.98365467 15 42 329 0.941176471 1.204119983 0.044117647 0.477272727 0.661764706 44 1 3 64 3R:23985354-23985483 6 41.5 4175 FBgn0039135 277 32.77 49.89333333 0.149819495 1.266402197 0.831774452 1 1 1 0.01 dme-miR-79-3p 7mer-m8 TAGCTTT 3R 23988236 23988242 + 3R_23988236_23988242_+ 0.620204031 0.620204031 0.620204031 0 CG5902 FBtr0301165|FBtr0084501|FBtr0084502 23988158|23988158|23988158 23988738|23988738|23988738 3R + 23988152 23988271 stop_codon CG5902 FlyBase G45110.1 AGTGCTAACAATTGGACAGGACGGCGGCGAGGCGATGATCCTGGCTTAGGGCAGGCCTGATGGCCGTCGTCCTCCTGCTGCTGCTAGCTTTTGAGTTTGGCCCAGCTTGGCGGCCGCTCG 14 23988243 0.979138223 10 14 90 1 1.204119983 0.5 0.071428571 0.1875 14 0 0 16 3R:23988152-23988271 7 CG5902 FBtr0084502|FBtr0301165|FBtr0084501 23988158|23988158|23988158 23988738|23988738|23988738 TAGCTTT 7mer-m8 dme-miR-79-3p 3R + 23988213 23988268 3'utr CG5902 FlyBase G34072.1 GGCCGTCGTCCTCCTGCTGCTGCTAGCTTTTGAGTTTGGCCCAGCTTGGCGGCCGC 7 23988245 0.97353819 5 7 46 1 0.903089987 0.375 0.142857143 0.25 7 0 0 8 3R:23988213-23988268 7 5 4176 FBgn0039136 356.6666667 25.57 39.43333333 0.014018692 0.19554165 0.126796281 -7 -9 -8 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 3R 23989430 23989436 - 3R_23989430_23989436_- 0.823349562 0.823349562 0.823349562 0 CG13604 FBtr0113275|FBtr0113276|FBtr0113277|FBtr0084509 23988804|23988804|23988804|23988804 23989471|23989471|23989471|23989471 3R - 23989408 23989452 3'utr CG13604 FlyBase G53982.1 TTCTCTGCAAGCATTGAGACTGAGACTCAACTCGATTGGGACGGA 26 23989438 0.81861698 2 25 128 0.965517241 1.447158031 0.172413793 0.076923077 0.172413793 26 1 0 28 3R:23989408-23989452 7 CG13604 FBtr0084509|FBtr0113277|FBtr0113276|FBtr0113275 23988804|23988804|23988804|23988804 23989471|23989471|23989471|23989471 AGACTGA 7mer-A1 dme-miR-14-3p 3R - 23989392 23989450 3'utr CG13604 FlyBase G40782.1 CTCTGCAAGCATTGAGACTGAGACTCAACTCGATTGGGACGGACCTGGAGGTGAATCAC 11 23989438 0.959921769 2 11 54 1 1.278753601 0.105263158 0.545454545 0.736842105 11 0 0 19 3R:23989392-23989450 7 17.5 4177 FBgn0039137 117.6666667 5.27 8.02 0.148725212 3.320683112 2.182044888 2 2 2 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3R 23995213 23995219 + 3R_23995213_23995219_+ 0.521223855 0.521223855 0.521223855 0 Rab7 FBtr0308612|FBtr0084503|FBtr0308611 23994749|23994749|23994749 23995252|23995452|23995252 3R + 23995150 23995241 3'utr Rab7 FlyBase G45117.1 TGCAACAGAACAGCAACATTGAGAATACAACATCAGAGTATCTTCTAAACAAACAAAAAATCTTGTGATTGTAAATTTAATAAAAGAATAAC 337 23995212 0.988788597 12 310 2912 0.923273657 1.235287907 0.046035806 0.139465875 0.25831202 337 10 20 361 3R:23995150-23995241 7 Rab7 FBtr0308612|FBtr0084503|FBtr0308611 23994749|23994749|23994749 23995252|23995452|23995252 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 23995178 23995245 3'utr Rab7 FlyBase G34078.1 AACATCAGAGTATCTTCTAAACAAACAAAAAATCTTGTGATTGTAAATTTAATAAAAGAATAACTTTT 241 23995219 0.637495373 10 223 2106 0.928571429 1.348026558 0.041666667 0.290456432 0.491071429 241 11 13 312 3R:23995178-23995245 7 281 4178 FBgn0015795 908.47 85 130.1166667 0.30931126 3.305882353 2.159600359 1 -6 -2.5 0.01 dme-miR-968-5p 6mer3-8 ACTACT 3R 23997889 23997894 - 3R_23997889_23997894_- 0.999999999 1 1 0 KrT95D FBtr0084507|FBtr0084508 23997536|23997536 23998637|23998637 3R - 23997866 23997920 3'utr KrT95D FlyBase G53984.1 TCTACCATATATACAAAACCATGTGTACTACTCTTATTGTTGTGATTTTTGAAAT 87 23997897 0.783029589 11 85 756 0.98245614 2.049218023 0.01754386 0.229885057 0.412280702 87 2 0 112 3R:23997866-23997920 6 KrT95D FBtr0084507|FBtr0084508 23997536|23997536 23998637|23998637 ACTACT 6mer3-8 dme-miR-968-5p 3R - 23997869 23997915 3'utr KrT95D FlyBase G40783.1 CATATATACAAAACCATGTGTACTACTCTTATTGTTGTGATTTTTGA 75 23997897 0.815281468 9 74 623 0.991935484 2.089905111 0 0.466666667 0.677419355 75 1 0 123 3R:23997869-23997915 6 77 4179 FBgn0020647 1157.06 25.70333333 39.3 0.066547975 2.995720399 1.959287532 3 3 3 0.01 dme-bantam-3p 8mer-A1 TGATCTCA 3R 23998101 23998108 - 3R_23998101_23998108_- 0.631136385 0.631136385 0.631136385 0 KrT95D FBtr0084507|FBtr0084508 23997536|23997536 23998637|23998637 3R - 23998055 23998135 3'utr KrT95D FlyBase G53986.1 CCAAGCAATCGGGAGCATTAGGCCCCATGATCTCAAAATCGCCGCTCCCGTTTGGCCAACTATCAAATGAACCTAAAAGTA 92 23998108 0.952704995 10 89 399 0.972477064 1.72427587 0.018348624 0.173913043 0.302752294 92 2 1 106 3R:23998055-23998135 8 KrT95D FBtr0084507|FBtr0084508 23997536|23997536 23998637|23998637 TGATCTCA 8mer-A1 dme-bantam-3p 3R - 23998080 23998133 3'utr KrT95D FlyBase G40785.1 AAGCAATCGGGAGCATTAGGCCCCATGATCTCAAAATCGCCGCTCCCGTTTGGC 63 23998108 0.838644418 5 59 271 0.93814433 1.959041392 0.051546392 0.365079365 0.587628866 63 6 0 91 3R:23998080-23998133 8 73 4180 FBgn0020647 1157.06 25.70333333 39.3 0.063090937 2.84009856 1.857506361 0 0 0 0.01 dme-miR-184-5p 7mer-m8 TGATAAG 3R 24034590 24034596 - 3R_24034590_24034596_- 0.658999343 0.658999343 0.658999343 0 Miro FBtr0084596|FBtr0084595|FBtr0303849|FBtr0321262 24034360|24034360|24034360|24034360 24034893|24034893|24034893|24034893 3R - 24034590 24034657 3'utr Miro FlyBase G54009.1 GAGCACATTGTGTACGCTGCATTTCTAATCGTATATTAACTTACATAAACCATGTTCTCTCTGATAAG 24 24034605 0.75765264 9 21 172 0.90625 1.462397998 0.125 0.291666667 0.46875 24 3 0 29 3R:24034590-24034657 6 Miro FBtr0084596|FBtr0084595|FBtr0303849|FBtr0321262 24034360|24034360|24034360|24034360 24034893|24034893|24034893|24034893 TGATAAG 7mer-m8 dme-miR-184-5p 3R - 24034556 24034687 3'utr Miro FlyBase G40799.1 GCAGGAATTGGGCTGGAGCAGTGGCCAGTCGAGCACATTGTGTACGCTGCATTTCTAATCGTATATTAACTTACATAAACCATGTTCTCTCTGATAAGTCAAATAAGCTATTGTTACCAGCATATTCGAGTA 14 24034598 0.987621698 9 14 114 1 1.361727836 0.043478261 0.357142857 0.608695652 14 0 0 23 3R:24034556-24034687 7 11.5 4181 FBgn0039140 543 24.22 36.88333333 0.021178637 0.474814203 0.311793945 9 2 5.5 0.01 dme-miR-184-5p 7mer-m1 GATAAGG 3R 24034874 24034880 - 3R_24034874_24034880_- 0.825582373 0.825582373 0.825582373 0 Miro FBtr0084596|FBtr0084595|FBtr0303849|FBtr0321262 24034360|24034360|24034360|24034360 24034893|24034893|24034893|24034893 3R - 24034841 24034878 3'utr Miro FlyBase G54011.1 TAAGGGGACGGGCTTAACACACGATTACCACGGACACG 5 24034854 0.911098621 2 4 16 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 3R:24034841-24034878 5 Miro FBtr0084596|FBtr0084595|FBtr0303849|FBtr0321262 24034360|24034360|24034360|24034360 24034893|24034893|24034893|24034893 GATAAGG 7mer-m1 dme-miR-184-5p 3R - 24034843 24034878 3'utr Miro FlyBase G40800.1 TAAGGGGACGGGCTTAACACACGATTACCACGGACA 5 24034854 0.904815404 3 5 17 1 0.698970004 0.2 0 0 5 0 0 5 3R:24034843-24034878 5 4 4182 FBgn0039140 543 24.22 36.88333333 0.007366483 0.165152766 0.108450068 -26 -26 -26 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 24042416 24042421 + 3R_24042416_24042421_+ 1 1 1 0 spas FBtr0084533|FBtr0346099 24041623|24041623 24042654|24042982 3R + 24042365 24042445 3'utr spas FlyBase G45135.1 TACAATCGTCTCCGATTCACCTATATTATTAGTAACACACCCAAAAATGTTGTACCTAGCAGGTGCGTATGGATCTGGTGT 54 24042415 0.982767264 7 52 397 0.967213115 1.770852012 0.508196721 0.111111111 0.213114754 54 2 0 59 3R:24042365-24042445 6 spas FBtr0084533|FBtr0346099 24041623|24041623 24042654|24042982 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 24042394 24042442 3'utr spas FlyBase G34092.1 TAGTAACACACCCAAAAATGTTGTACCTAGCAGGTGCGTATGGATCTGG 41 24042415 0.711728743 6 33 257 0.793650794 1.397940009 0.507936508 0.341463415 0.571428571 41 12 1 50 3R:24042394-24042442 6 44 4183 FBgn0039141 308.9966667 10.26 15.68 0.142396358 4.288499025 2.806122449 1 1 1 0.01 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3R 24042549 24042554 + 3R_24042549_24042554_+ 0.999997557 0.999718251 0.999857904 0.000197495 spas FBtr0084533|FBtr0346099 24041623|24041623 24042654|24042982 3R + 24042505 24042570 3'utr spas FlyBase G45137.1 TTGAACCAGCTTCAACGCAGCTCGCCCACCCGGAATTTGAGTTCTTTGACTAGTTACTAAACACAG 11 24042541 0.973387977 6 10 62 0.923076923 1.079181246 0.461538462 0.181818182 0.307692308 11 1 0 12 3R:24042505-24042570 6 spas FBtr0084533|FBtr0346099 24041623|24041623 24042654|24042982 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3R + 24042517 24042554 3'utr spas FlyBase G34093.1 CAACGCAGCTCGCCCACCCGGAATTTGAGTTCTTTGAC 5 24042542 0.977658869 4 4 28 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:24042517-24042554 6 4 4184 FBgn0039141 308.9966667 10.26 15.68 0.012945123 0.389863548 0.255102041 8 7 7.5 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 24043528 24043533 - 3R_24043528_24043533_- 1 1 1 0 Rox8 FBtr0333201|FBtr0084594|FBtr0333202|FBtr0333200|FBtr0084592|FBtr0084591 24043054|24043054|24043054|24043054|24043054|24043054 24043963|24043963|24043963|24043963|24043963|24043963 3R - 24043511 24043633 3'utr Rox8 FlyBase G54026.1 AGTCGAACGTTAAGGCGGTGCGTGGAGCTCAACTTCAAGTGATCCACGCCGGCGACAACTGAAAGAACATCAATTGAAAAGCTCCGGGCGATGGGCGGGTAGCTGTAACAATCTAATCCAATC 28 24043542 0.924746377 11 26 94 0.967741935 1.477121255 0.064516129 0.107142857 0.193548387 28 1 0 30 3R:24043511-24043633 6 Rox8 FBtr0333202|FBtr0333200|FBtr0084592|FBtr0084591|FBtr0333201|FBtr0084594 24043054|24043054|24043054|24043054|24043054|24043054 24043963|24043963|24043963|24043963|24043963|24043963 AGCTGT 6mer3-8 dme-miR-1008-3p 3R - 24043500 24043560 3'utr Rox8 FlyBase G40812.1 TTGAAAAGCTCCGGGCGATGGGCGGGTAGCTGTAACAATCTAATCCAATCTAAGTACGTGT 10 24043542 0.941254379 5 9 39 0.823529412 1.146128036 0.117647059 0.5 0.705882353 10 3 0 14 3R:24043500-24043560 6 7.5 4185 FBgn0005649 2598.78 95.18666667 146.0933333 0.00288597 0.078792548 0.051337045 9 9 9 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 24053421 24053426 + 3R_24053421_24053426_+ 1 1 1 0 CG5991 FBtr0084538|FBtr0084536|FBtr0084537 24053389|24053389|24053389 24053592|24053592|24053592 3R + 24053391 24053558 3'utr CG5991 FlyBase G45154.1 AAATGGGAGCCACAATTATGTACCGAATCAGTGCAAAGTCCTGTCCCCCAACTGCTCAGATCACTTGTTGTATTAGCATTAGACGCTCGTGTCCTAGGCAAATGTATTTTGTGAACATCCTGCGAAGCTAACTCTGTGTATTGTTGCCATTTCAGTAGTTTTAAGCTA 354 24053418 0.965449348 30 335 2437 0.940047962 1.894316063 0.230215827 0.149717514 0.278177458 354 21 4 392 3R:24053391-24053558 6 CG5991 FBtr0084536|FBtr0084537|FBtr0084538 24053389|24053389|24053389 24053592|24053592|24053592 GTGCAA 6mer3-8 dme-miR-92b-3p 3R + 24053394 24053452 3'utr CG5991 FlyBase G34105.1 TGGGAGCCACAATTATGTACCGAATCAGTGCAAAGTCCTGTCCCCCAACTGCTCAGATC 75 24053432 0.870118029 8 66 344 0.914529915 1.330413773 0.076923077 0.4 0.615384615 75 6 4 107 3R:24053394-24053452 6 107 4186 FBgn0026576 379.7933333 22.07666667 33.86 0.28173217 4.846746188 3.16007088 3 -11 -4 0.01 dme-miR-263a-5p 7mer-m1 TGCCATT 3R 24053535 24053541 + 3R_24053535_24053541_+ 0.765586663 0.765586663 0.765586663 0 CG5991 FBtr0084538|FBtr0084536|FBtr0084537 24053389|24053389|24053389 24053592|24053592|24053592 3R + 24053391 24053558 3'utr CG5991 FlyBase G45154.1 AAATGGGAGCCACAATTATGTACCGAATCAGTGCAAAGTCCTGTCCCCCAACTGCTCAGATCACTTGTTGTATTAGCATTAGACGCTCGTGTCCTAGGCAAATGTATTTTGTGAACATCCTGCGAAGCTAACTCTGTGTATTGTTGCCATTTCAGTAGTTTTAAGCTA 354 24053531 0.965449348 30 335 2437 0.940047962 1.894316063 0.230215827 0.149717514 0.278177458 354 21 4 392 3R:24053391-24053558 7 CG5991 FBtr0084536|FBtr0084537|FBtr0084538 24053389|24053389|24053389 24053592|24053592|24053592 TGCCATT 7mer-m1 dme-miR-263a-5p 3R + 24053465 24053569 3'utr CG5991 FlyBase G34106.1 AGCATTAGACGCTCGTGTCCTAGGCAAATGTATTTTGTGAACATCCTGCGAAGCTAACTCTGTGTATTGTTGCCATTTCAGTAGTTTTAAGCTATATTTTATACA 174 24053532 0.669943802 16 169 1460 0.971530249 2.436162647 0.434163701 0.408045977 0.633451957 174 8 0 273 3R:24053465-24053569 7 131 4187 FBgn0026576 379.7933333 22.07666667 33.86 0.344924433 5.933866828 3.868871825 4 3 3.5 0.01 dme-bantam-3p 8mer-A1 TGATCTCA 3R 24055167 24055174 - 3R_24055167_24055174_- 0.631136385 0.631136385 0.631136385 0 Hsp68 FBtr0084589 24055078 24055196 3R - 24055146 24055243 stop_codon Hsp68 FlyBase G54050.1 AGCAAGCTGGCGGTTATAAGGGTCCCACCGTCGAGGAGGTGGACTAATTCAAACGAAGTCCCCCTATATTGATCTCATAACCAAAAATACTCAAATAT 1368 24055175 0.876142772 14 1328 9596 0.971669681 1.952092532 0.177817963 0.159356725 0.306811332 1368 30 17 1612 3R:24055146-24055243 8 Hsp68 FBtr0084589 24055078 24055196 TGATCTCA 8mer-A1 dme-bantam-3p 3R - 24055105 24055193 3'utr Hsp68 FlyBase G40829.1 AAACGAAGTCCCCCTATATTGATCTCATAACCAAAAATACTCAAATATCTAAAAATATAGTTCCAATATGCTATTAAATAGTATTAATA 663 24055175 0.678258466 13 636 4675 0.962151394 1.984977126 0.156374502 0.34841629 0.569721116 663 29 9 966 3R:24055105-24055193 8 1005 4188 FBgn0001230 388.3333333 20.75333333 31.29666667 2.587982833 48.42595567 32.11204601 1 1 1 0.01 dme-miR-11-3p 7mer-m1 TGTGATG 3R 24067400 24067406 - 3R_24067400_24067406_- 0.535593563 0.535593563 0.535593563 0 4EHP FBtr0300475|FBtr0303159 24067364|24064475 24101797|24068001 3R - 24067385 24067426 3'utr 4EHP FlyBase G54063.1 TTAATTAGTAATTATTATAATGTGATGTTATATATATAAATC 35 24067410 0.651195498 9 33 393 0.973684211 1.568201724 0.052631579 0.085714286 0.157894737 35 1 0 37 3R:24067385-24067426 7 4EHP FBtr0300475|FBtr0303159 24067364|24064475 24101797|24068001 TGTGATG 7mer-m1 dme-miR-11-3p 3R - 24067384 24067426 3'utr 4EHP FlyBase G40836.1 TTAATTAGTAATTATTATAATGTGATGTTATATATATAAATCA 34 24067399 0.652942345 7 31 396 0.913043478 1.62324929 0 0.294117647 0.47826087 34 4 0 42 3R:24067384-24067426 7 34 4189 FBgn0053100 1050.1 50.24 77.18 0.032377869 0.676751592 0.440528634 4 -7 -1.5 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 24067811 24067816 - 3R_24067811_24067816_- 1 1 1 0 4EHP FBtr0300475|FBtr0303159 24067364|24064475 24101797|24068001 3R - 24067801 24067846 3'utr 4EHP FlyBase G54065.1 TGCTGTAAATGAGGCAGTGGCACAAAAGGAGTGCAAGTGCTGGGCC 13 24067837 0.845148818 2 9 46 0.692307692 0.954242509 0.307692308 0 0 13 4 0 9 3R:24067801-24067846 6 4EHP FBtr0300475|FBtr0303159 24067364|24064475 24101797|24068001 GTGCAA 6mer3-8 dme-miR-92b-3p 3R - 24067814 24067846 3'utr 4EHP FlyBase G40837.1 TGCTGTAAATGAGGCAGTGGCACAAAAGGAGTG 7 24067837 0.765207807 2 7 28 1 1.146128036 0.285714286 0.714285714 0.857142857 7 0 0 14 3R:24067814-24067846 2 7 4190 FBgn0053100 1050.1 50.24 77.18 0.006666032 0.13933121 0.090697072 21 21 21 0.01 dme-bantam-3p 6mer2-7 GATCTC 3R 24109866 24109871 + 3R_24109866_24109871_+ 1 1 1 0 CG18428 FBtr0305314 24109595 24110010 3R + 24109857 24109916 3'utr CG18428 FlyBase G45172.1 ACGAAGCCAGATCTCTGGACGCCGCCAAGCGTCGCAAATAGCTAATTTACCAAAAATGCA 79 24109872 0.908520361 3 77 191 0.975903614 1.607455023 0.409638554 0.050632911 0.096385542 79 1 1 81 3R:24109857-24109916 6 CG18428 FBtr0305314 24109595 24110010 GATCTC 6mer2-7 dme-bantam-3p 3R + 24109828 24109916 3'utr CG18428 FlyBase G34119.1 GAAGGCCACCCGCGGTGATGGAGAGTTCTACGAAGCCAGATCTCTGGACGCCGCCAAGCGTCGCAAATAGCTAATTTACCAAAAATGCA 56 24109872 0.900562506 7 56 147 1 1.934498451 0.325581395 0.410714286 0.61627907 56 0 0 86 3R:24109828-24109916 6 62.5 4191 FBgn0039149 54 13.08 20.21666667 1.157407407 4.778287462 3.091508656 -6 -6 -6 0.01 dme-miR-2535b-3p 8mer-A1 CCGTGAGA 3R 24167711 24167718 - 3R_24167711_24167718_- 0.641821188 0.641821188 0.641821188 0 CG5510 FBtr0084576 24167673 24167937 3R - 24167692 24167739 3'utr CG5510 FlyBase G54112.1 TGAACTATAGGAAAATTGAGACCGTGAGAATATTATTGCGTAGACAAG 18 24167723 0.760100224 6 17 89 0.958333333 1.361727836 0.125 0.333333333 0.5 18 1 0 23 3R:24167692-24167739 8 CG5510 FBtr0084576 24167673 24167937 CCGTGAGA 8mer-A1 dme-miR-2535b-3p 3R - 24167695 24167734 3'utr CG5510 FlyBase G40868.1 TATAGGAAAATTGAGACCGTGAGAATATTATTGCGTAGAC 6 24167715 0.937340613 3 5 32 0.857142857 0.77815125 0.142857143 0.166666667 0.285714286 6 1 0 6 3R:24167695-24167734 8 11.5 4192 FBgn0039160 449.3066667 40.31666667 61.58 0.025594991 0.285241835 0.186748944 5 -3 1 0.01 dme-miR-317-5p 8mer-A1 GTATCCCA 3R 24167839 24167846 - 3R_24167839_24167846_- 0.675380922 0.675380922 0.675380922 0 CG5510 FBtr0084576 24167673 24167937 3R - 24167823 24167948 stop_codon CG5510 FlyBase G54113.1 GTTTCTACTGAGCTCTCTAGCTAGTTCATCACAGTAGCATCATGTTAGGAGTTACCCGGACCTCAGTTGATCGCAACTTTTATTTATATTTATACCGCGACTGTATCCCATTTCTTATCACCCTTT 60 24167845 0.936914751 17 56 395 0.940298507 1.498310554 0.119402985 0.116666667 0.208955224 60 3 1 63 3R:24167823-24167948 8 CG5510 FBtr0084576 24167673 24167937 GTATCCCA 8mer-A1 dme-miR-317-5p 3R - 24167808 24167867 3'utr CG5510 FlyBase G40869.1 ATTTATATTTATACCGCGACTGTATCCCATTTCTTATCACCCTTTTTAGTTTCCTTAATT 15 24167845 0.982028415 6 15 118 1 1.380211242 0.041666667 0.4 0.625 15 0 0 24 3R:24167808-24167867 8 20 4193 FBgn0039160 449.3066667 40.31666667 61.58 0.044513027 0.496072757 0.324780773 -1 -1 -1 0.01 dme-miR-278-3p 6mer3-8 CCCACC 3R 24198008 24198013 - 3R_24198008_24198013_- 1 1 1 0 twin FBtr0084571|FBtr0084568|FBtr0084570|FBtr0084567|FBtr0084569|FBtr0084566 24197589|24196891|24197589|24197786|24197589|24197589 24198435|24198435|24198435|24198435|24198435|24198435 3R - 24197985 24198070 3'utr twin FlyBase G54135.1 CAGTTTAAGTTAGATACGACAAACTTTGATTTCTAATCCGGTCCCTCAGCTCTTGTACCCACCATCCCCCCAAGAACCCTAAGTTA 49 24198043 0.958011269 10 48 337 0.98245614 1.748188027 0.140350877 0.163265306 0.280701754 49 1 0 56 3R:24197985-24198070 6 twin FBtr0084569|FBtr0084566|FBtr0084571|FBtr0084568|FBtr0084570|FBtr0084567 24197589|24197589|24197589|24196891|24197589|24197786 24198435|24198435|24198435|24198435|24198435|24198435 CCCACC 6mer3-8 dme-miR-278-3p 3R - 24197934 24198069 3'utr twin FlyBase G40884.1 AGTTTAAGTTAGATACGACAAACTTTGATTTCTAATCCGGTCCCTCAGCTCTTGTACCCACCATCCCCCCAAGAACCCTAAGTTATAAGCTGACGACGTTGTGGAGGTCCCGCCGCTTTGTGCGCTGGATCGCAAA 34 24198043 0.982921359 13 31 231 0.86 1.633468456 0.24 0.294117647 0.52 34 7 0 43 3R:24197934-24198069 6 10 4194 FBgn0011725 325.5 12.29666667 18.56 0.030721966 0.813228517 0.538793103 30 30 30 0.01 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3R 24248459 24248464 + 3R_24248459_24248464_+ 1 1 1 0 mask FBtr0345261|FBtr0084562|FBtr0334942|FBtr0305043|FBtr0334943|FBtr0084563 24248013|24248013|24248013|24248013|24248013|24248013 24250248|24250248|24250248|24250248|24250248|24248853 3R + 24248448 24248490 3'utr mask FlyBase G45299.1 ATGTTTGAAACTGGTGCCCAGGCAACTGGGTCCAATATATATT 15 24248462 0.860838539 3 14 61 0.9375 1.176091259 0.0625 0.066666667 0.125 15 1 0 15 3R:24248448-24248490 6 mask FBtr0334942|FBtr0305043|FBtr0334943|FBtr0084563|FBtr0345261|FBtr0084562 24248013|24248013|24248013|24248013|24248013|24248013 24250248|24250248|24250248|24248853|24250248|24250248 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3R + 24248446 24248493 3'utr mask FlyBase G34195.1 ACATGTTTGAAACTGGTGCCCAGGCAACTGGGTCCAATATATATTATT 8 24248462 0.971071257 4 7 40 1 1 0 0.428571429 0.6 7 0 0 10 3R:24248446-24248493 6 10.5 4195 FBgn0043884 5250.546667 44.06333333 67.82333333 0.001999792 0.238293366 0.154813977 -3 -3 -3 0.01 dme-miR-79-3p 7mer-m8 TAGCTTT 3R 24248541 24248547 + 3R_24248541_24248547_+ 0.620204031 0.620203989 0.62020401 0 mask FBtr0345261|FBtr0084562|FBtr0334942|FBtr0305043|FBtr0334943|FBtr0084563 24248013|24248013|24248013|24248013|24248013|24248013 24250248|24250248|24250248|24250248|24250248|24248853 3R + 24248500 24248572 3'utr mask FlyBase G45300.1 TAAATGTATTGATATTTTTTGAAGAAGCATGAAGTTAGTGGTAGCTTTTTGTGTGTTGAGCTATAGGGAAAAC 17 24248548 0.989378383 7 16 155 0.952380952 1.301029996 0.333333333 0.117647059 0.285714286 17 1 0 20 3R:24248500-24248572 7 mask FBtr0334942|FBtr0305043|FBtr0334943|FBtr0084563|FBtr0345261|FBtr0084562 24248013|24248013|24248013|24248013|24248013|24248013 24250248|24250248|24250248|24248853|24250248|24250248 TAGCTTT 7mer-m8 dme-miR-79-3p 3R + 24248528 24248568 3'utr mask FlyBase G34196.1 ATGAAGTTAGTGGTAGCTTTTTGTGTGTTGAGCTATAGGGA 9 24248549 0.650071115 3 9 93 1 1.146128036 0.571428571 0.444444444 0.642857143 9 0 0 14 3R:24248528-24248568 7 11.5 4196 FBgn0043884 5250.546667 44.06333333 67.82333333 0.002190248 0.260987972 0.169558166 -7 -8 -7.5 0.01 dme-miR-970-3p 8mer-A1 TCTTATGA 3R 24248707 24248714 + 3R_24248707_24248714_+ 0.630790218 0.630790218 0.630790218 0 mask FBtr0345261|FBtr0084562|FBtr0334942|FBtr0305043|FBtr0334943|FBtr0084563 24248013|24248013|24248013|24248013|24248013|24248013 24250248|24250248|24250248|24250248|24250248|24248853 3R + 24248650 24248724 3'utr mask FlyBase G45302.1 ACACAAACCCACACACCCGCATATACACAAATACATTTACGTTAGGATAAAAGTCAGTCTTATGAATGAAACATT 21 24248707 0.972439039 9 20 120 0.916666667 1.342422681 0.125 0.142857143 0.25 21 2 0 22 3R:24248650-24248724 8 mask FBtr0334942|FBtr0305043|FBtr0334943|FBtr0084563|FBtr0345261|FBtr0084562 24248013|24248013|24248013|24248013|24248013|24248013 24250248|24250248|24250248|24248853|24250248|24250248 TCTTATGA 8mer-A1 dme-miR-970-3p 3R + 24248660 24248754 3'utr mask FlyBase G34197.1 ACACACCCGCATATACACAAATACATTTACGTTAGGATAAAAGTCAGTCTTATGAATGAAACATTAAATTGAAATGTTTAGCGCCAGCTAAAGTT 17 24248714 0.981160097 8 15 110 0.913043478 1.322219295 0.043478261 0.235294118 0.434782609 17 2 0 21 3R:24248660-24248754 8 11 4197 FBgn0043884 5250.546667 44.06333333 67.82333333 0.00209502 0.249640669 0.162186072 0 -7 -3.5 0.01 dme-miR-1007-3p 7mer-m8 TGAGCTT 3R 24291684 24291690 + 3R_24291684_24291690_+ 0.620203442 0.620203442 0.620203442 0 CG6364 FBtr0084602|FBtr0309095|FBtr0309097|FBtr0309096 24291623|24291623|24291623|24291623 24292251|24292599|24293111|24293371 3R + 24291643 24291713 3'utr CG6364 FlyBase G45334.1 AGCTTCTGAGGCGGCCAATTCCTCGTCCTAGCGCCGCGTCTTGAGCTTGTACTAATTGCCAAAAAAAAAAA 30 24291671 0.97881691 6 27 191 0.90625 0.985276743 0.375 0.066666667 0.125 30 1 2 29 3R:24291643-24291713 7 CG6364 FBtr0309097|FBtr0309096|FBtr0084602|FBtr0309095 24291623|24291623|24291623|24291623 24293111|24293371|24292251|24292599 TGAGCTT 7mer-m8 dme-miR-1007-3p 3R + 24291659 24291731 3'utr CG6364 FlyBase G34221.1 AATTCCTCGTCCTAGCGCCGCGTCTTGAGCTTGTACTAATTGCCAAAAAAAAAAAACTAAAGTCCAAACGCTT 27 24291671 0.928797432 6 26 163 0.977777778 1.342422681 0.4 0.481481481 0.688888889 27 0 1 44 3R:24291659-24291731 7 21.5 4198 FBgn0263398 498.7566667 32.38666667 49.51666667 0.043107193 0.663853438 0.43419724 13 13 13 0.01 dme-miR-7-5p 6mer3-8 GTCTTC 3R 24291813 24291818 + 3R_24291813_24291818_+ 1 1 1 0 CG6364 FBtr0084602|FBtr0309095|FBtr0309097|FBtr0309096 24291623|24291623|24291623|24291623 24292251|24292599|24293111|24293371 3R + 24291797 24291894 3'utr CG6364 FlyBase G45335.1 CATCGCTTCTCATTTGGTCTTCTCATCGTAACCGATTAACGTAGTCCTAAGATTGAAAAGTATCTTTAGTATCTACTCTTGCATATGTTCAACAATAC 16 24291811 0.790952198 11 16 141 1 1.230448921 0.176470588 0.0625 0.117647059 16 0 0 17 3R:24291797-24291894 6 CG6364 FBtr0309097|FBtr0309096|FBtr0084602|FBtr0309095 24291623|24291623|24291623|24291623 24293111|24293371|24292251|24292599 GTCTTC 6mer3-8 dme-miR-7-5p 3R + 24291799 24291845 3'utr CG6364 FlyBase G34222.1 TCGCTTCTCATTTGGTCTTCTCATCGTAACCGATTAACGTAGTCCTA 8 24291811 0.704601409 5 8 64 1 1.041392685 0.181818182 0.375 0.545454545 8 0 0 11 3R:24291799-24291845 6 7 4199 FBgn0263398 498.7566667 32.38666667 49.51666667 0.0140349 0.216138329 0.141366543 2 2 2 0.01 dme-miR-968-5p 6mer3-8 ACTACT 3R 24292106 24292111 + 3R_24292106_24292111_+ 0.999200234 1 0.999600117 0.000565544 CG6364 FBtr0084602|FBtr0309095|FBtr0309097|FBtr0309096 24291623|24291623|24291623|24291623 24292251|24292599|24293111|24293371 3R + 24292109 24292147 3'utr CG6364 FlyBase G45337.1 ACTCCTATCCATCTCTGGTTTGTGAATGTTATTATAAGC 14 24292124 0.720485078 4 14 133 1 1.301029996 0.45 0.357142857 0.55 14 0 0 20 3R:24292109-24292147 2 CG6364 FBtr0309097|FBtr0309096|FBtr0084602|FBtr0309095 24291623|24291623|24291623|24291623 24293111|24293371|24292251|24292599 ACTACT 6mer3-8 dme-miR-968-5p 3R + 24292079 24292136 3'utr CG6364 FlyBase G34224.1 TGTTTAATGGTGCCCGATACTTTGAAAACTACTCCTATCCATCTCTGGTTTGTGAATG 11 24292124 0.990639002 4 9 90 0.823529412 0.84509804 0.529411765 0.545454545 0.705882353 11 2 1 14 3R:24292079-24292136 6 3.5 4200 FBgn0263398 498.7566667 32.38666667 49.51666667 0.00701745 0.108069164 0.070683272 -18 -18 -18 0.01 dme-miR-14-3p 6mer2-7 AGACTG 3R 24328194 24328199 + 3R_24328194_24328199_+ 1 1 1 0 BRWD3 FBtr0084604 24328188 24328619 3R + 24328167 24328266 stop_codon BRWD3 FlyBase G45363.1 CGCGCGGTATCTTCAAGGAGTGACCGCAGACTGTTTTATGTATAAATTAAATCTAATTGCTAAATCAACAAACCTTTGTAACATTTGCTAGAGTCTTATT 65 24328200 0.689092128 9 63 405 0.975308642 1.596597096 0.061728395 0.169230769 0.333333333 65 1 1 79 3R:24328167-24328266 6 BRWD3 FBtr0084604 24328188 24328619 AGACTG 6mer2-7 dme-miR-14-3p 3R + 24328165 24328248 stop_codon BRWD3 FlyBase G34237.1 GGCGCGCGGTATCTTCAAGGAGTGACCGCAGACTGTTTTATGTATAAATTAAATCTAATTGCTAAATCAACAAACCTTTGTAAC 37 24328200 0.972455649 10 37 219 1 1.72427587 0 0.324324324 0.528301887 37 0 0 53 3R:24328165-24328248 6 46.5 4201 FBgn0011785 875.23 14.49333333 22.14666667 0.053128892 3.208371665 2.099638772 -6 -6 -6 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3R 24328578 24328584 - 3R_24328578_24328584_- 0.521223855 0.521223855 0.521223855 0 CG5728 FBtr0084632 24328453 24328688 3R - 24328514 24328593 3'utr CG5728 FlyBase G54186.1 TAAATGAAGTGTGATTCCGAGTGCTACCTTTAAATATATATGTATGATAGTACCTATATATTATAGAAATACATATAAAA 32 24328572 0.986496262 9 28 247 0.930232558 1.301029996 0.279069767 0.28125 0.465116279 32 2 1 40 3R:24328514-24328593 7 CG5728 FBtr0084632 24328453 24328688 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 24328536 24328641 3'utr CG5728 FlyBase G40919.1 AAGAGTTACATACAGTGTTTTTCATGATACTTTATTCTAAAACTATTTTAAATGAAGTGTGATTCCGAGTGCTACCTTTAAATATATATGTATGATAGTACCTATA 22 24328579 0.911690021 15 21 186 0.96969697 1.505149978 0.303030303 0.363636364 0.575757576 22 1 0 32 3R:24328536-24328641 7 19 4202 FBgn0039182 780.49 20.48333333 31.61333333 0.024343682 0.927583401 0.601012231 -12 -5 -8.5 0.01 dme-miR-14-3p 8mer-A1 AAGACTGA 3R 24344645 24344652 - 3R_24344645_24344652_- 0.643565469 0.643565469 0.643565469 0 CG5746 FBtr0334603 24343893 24346710 3R - 24344606 24344746 3'utr CG5746 FlyBase G54200.1 ATGTATACAATGATTTTATTTGTTATTATTAAGCCGAACCTAAACTACAGTCTTAAAAAGTATAAACAAGATATGCAAATGAAAATTTATTAAAAAGACTGATACTTCACGAGATACAATCTCCATAGATCCAAAGAAACT 58 24344658 0.980591959 18 53 375 0.897058824 1.30820858 0.044117647 0.155172414 0.279411765 58 5 2 61 3R:24344606-24344746 8 CG5746 FBtr0334603 24343893 24346710 AAGACTGA 8mer-A1 dme-miR-14-3p 3R - 24344598 24344745 3'utr CG5746 FlyBase G40927.1 TGTATACAATGATTTTATTTGTTATTATTAAGCCGAACCTAAACTACAGTCTTAAAAAGTATAAACAAGATATGCAAATGAAAATTTATTAAAAAGACTGATACTTCACGAGATACAATCTCCATAGATCCAAAGAAACTAAATATAA 43 24344658 0.988572706 18 36 313 0.84375 1.033423755 0.109375 0.279069767 0.515625 43 6 4 54 3R:24344598-24344745 8 34.5 4203 FBgn0039186 880.5666667 39.34 60.32 0.039179316 0.876970005 0.571949602 6 6 6 0.01 dme-miR-980-5p 7mer-A1 AAAAACA 3R 24345211 24345217 - 3R_24345211_24345217_- 0.782911748 0.782911824 0.782911786 7.07E-08 CG5746 FBtr0334603 24343893 24346710 3R - 24345203 24345243 3'utr CG5746 FlyBase G54202.1 ATTTTGGTAAGTTAAGGTTAATGCCAAAAAACATATATACA 13 24345222 0.910362096 2 13 69 1 1.176091259 0.133333333 0.153846154 0.266666667 13 0 0 15 3R:24345203-24345243 7 CG5746 FBtr0334603 24343893 24346710 AAAAACA 7mer-A1 dme-miR-980-5p 3R - 24345167 24345243 3'utr CG5746 FlyBase G40929.1 ATTTTGGTAAGTTAAGGTTAATGCCAAAAAACATATATACAAAAAATTTAGAATATGATGACCTCAGCATGCAAAAA 12 24345222 0.972305517 5 11 64 0.888888889 1.204119983 0.055555556 0.333333333 0.555555556 12 2 0 16 3R:24345167-24345243 7 12 4204 FBgn0039186 880.5666667 39.34 60.32 0.013627588 0.305033045 0.198938992 5 5 5 0.01 dme-miR-305-5p 8mer-A1 AGTACAAA 3R 24345262 24345269 - 3R_24345262_24345269_- 0.605654138 0.605654138 0.605654138 0 CG5746 FBtr0334603 24343893 24346710 3R - 24345256 24345328 3'utr CG5746 FlyBase G54203.1 CACGTACCATAACAATTCAATTAGATAAATATCTAAAATTACAAACTGAAAGCACTGAAAGTACAAAATGAAA 31 24345260 0.952942615 6 23 106 0.736842105 0.970036777 0.105263158 0.193548387 0.342105263 31 8 2 28 3R:24345256-24345328 8 CG5746 FBtr0334603 24343893 24346710 AGTACAAA 8mer-A1 dme-miR-305-5p 3R - 24345249 24345308 3'utr CG5746 FlyBase G40930.1 TTAGATAAATATCTAAAATTACAAACTGAAAGCACTGAAAGTACAAAATGAAAATATAAA 27 24345267 0.698878618 7 21 91 0.813953488 0.84509804 0.023255814 0.444444444 0.651162791 27 4 4 35 3R:24345249-24345308 8 24 4205 FBgn0039186 880.5666667 39.34 60.32 0.027255177 0.61006609 0.397877984 -9 -2 -5.5 0.01 dme-miR-14-3p 8mer-A1 AAGACTGA 3R 24345630 24345637 - 3R_24345630_24345637_- 0.643565469 0.643565469 0.643565469 0 CG5746 FBtr0334603 24343893 24346710 3R - 24345545 24345674 3'utr CG5746 FlyBase G54205.1 AGACGAATAATGAGTGAAAAATGTGAAAAAAAAACGTAAGACTGAATATATTCACGAACCGAAGCTGCACTGCAAGCATACAAGTCAAGAAAAATGAGAGACAAATGAATGAAATAACAGAGTTTTAAGT 42 24345638 0.930267726 12 41 151 0.978723404 1.662757832 0.170212766 0.119047619 0.212765957 42 1 0 46 3R:24345545-24345674 8 CG5746 FBtr0334603 24343893 24346710 AAGACTGA 8mer-A1 dme-miR-14-3p 3R - 24345597 24345648 3'utr CG5746 FlyBase G40932.1 AAAAAAAACGTAAGACTGAATATATTCACGAACCGAAGCTGCACTGCAAGCA 21 24345638 0.919651211 4 18 63 0.870967742 1.431363764 0 0.380952381 0.580645161 21 4 0 27 3R:24345597-24345648 8 20.5 4206 FBgn0039186 880.5666667 39.34 60.32 0.023280463 0.521098119 0.339854111 1 1 1 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 24346179 24346184 - 3R_24346179_24346184_- 1 1 1 0 CG5746 FBtr0334603|FBtr0334602|FBtr0273282|FBtr0084631|FBtr0084630|FBtr0334601|FBtr0273283 24343893|24345790|24345790|24345790|24345790|24345790|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 3R - 24346008 24346201 3'utr CG5746 FlyBase G54207.1 AATGAGAGTACGTAACATGATCTTTTGAATGAACTAAATTTAAACATTTTGTGAATCATGTAAAATTGTATACAAATGAATGCAATGTATATTTTAGTTTTTAAGCTGAAAACCGCAATCCACTCTCGACACAATTATTTTCTATCCCACATGCATCTGAAAGCGTTTATGATTTTGCAAGATTGTGTTTTTTT 61 24346184 0.980956857 17 60 438 0.987179487 1.886490725 0.166666667 0.229508197 0.397435897 61 1 0 77 3R:24346008-24346201 6 CG5746 FBtr0273283|FBtr0084630|FBtr0334601|FBtr0273282|FBtr0084631|FBtr0334603|FBtr0334602 24345790|24345790|24345790|24345790|24345790|24343893|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 TGATCT 6mer3-8 dme-bantam-3p 3R - 24346140 24346207 3'utr CG5746 FlyBase G40934.1 CGGAAAAATGAGAGTACGTAACATGATCTTTTGAATGAACTAAATTTAAACATTTTGTGAATCATGTA 40 24346183 0.981501476 5 39 287 0.983050847 1.763427994 0.271186441 0.4 0.593220339 40 1 0 58 3R:24346140-24346207 6 36.5 4207 FBgn0039186 880.5666667 39.34 60.32 0.041450581 0.927808846 0.605106101 0 -1 -0.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 3R 24346235 24346241 - 3R_24346235_24346241_- 0.667028911 0.671784732 0.669406821 0.003362858 CG5746 FBtr0334603|FBtr0334602|FBtr0273282|FBtr0084631|FBtr0084630|FBtr0334601|FBtr0273283 24343893|24345790|24345790|24345790|24345790|24345790|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 3R - 24346228 24346333 3'utr CG5746 FlyBase G54208.1 TAGACAAACGGAGCTAGACTGCACTGAGCTCCAGCCTAAGAAAATTAAATGTGCTCCTCCTTAGTTCCATTTACAATTACAAGTCAACTGTGACCAAAGTATGCTA 25 24346264 0.972417503 15 23 144 0.935483871 1.462397998 0.193548387 0.2 0.35483871 25 2 0 29 3R:24346228-24346333 7 CG5746 FBtr0273283|FBtr0084630|FBtr0334601|FBtr0273282|FBtr0084631|FBtr0334603|FBtr0334602 24345790|24345790|24345790|24345790|24345790|24343893|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 24346226 24346289 3'utr CG5746 FlyBase G40935.1 TTAAATGTGCTCCTCCTTAGTTCCATTTACAATTACAAGTCAACTGTGACCAAAGTATGCTACA 15 24346245 0.725993815 10 15 102 1 1.342422681 0.136363636 0.4 0.590909091 15 0 0 22 3R:24346226-24346289 7 7.5 4208 FBgn0039186 880.5666667 39.34 60.32 0.008517243 0.190645653 0.12433687 23 4 13.5 0.01 dme-miR-1007-3p 6mer3-8 TGAGCT 3R 24346304 24346309 - 3R_24346304_24346309_- 1 1 1 0 CG5746 FBtr0334603|FBtr0334602|FBtr0273282|FBtr0084631|FBtr0084630|FBtr0334601|FBtr0273283 24343893|24345790|24345790|24345790|24345790|24345790|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 3R - 24346228 24346333 3'utr CG5746 FlyBase G54208.1 TAGACAAACGGAGCTAGACTGCACTGAGCTCCAGCCTAAGAAAATTAAATGTGCTCCTCCTTAGTTCCATTTACAATTACAAGTCAACTGTGACCAAAGTATGCTA 25 24346309 0.972417503 15 23 144 0.935483871 1.462397998 0.193548387 0.2 0.35483871 25 2 0 29 3R:24346228-24346333 6 CG5746 FBtr0273283|FBtr0084630|FBtr0334601|FBtr0273282|FBtr0084631|FBtr0334603|FBtr0334602 24345790|24345790|24345790|24345790|24345790|24343893|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 TGAGCT 6mer3-8 dme-miR-1007-3p 3R - 24346297 24346330 3'utr CG5746 FlyBase G40936.1 ACAAACGGAGCTAGACTGCACTGAGCTCCAGCCT 7 24346309 0.801854738 2 7 20 1 1.041392685 0 0.142857143 0.454545455 7 0 0 11 3R:24346297-24346330 6 7.5 4209 FBgn0039186 880.5666667 39.34 60.32 0.008517243 0.190645653 0.12433687 0 0 0 0.01 dme-miR-277-3p 7mer-A1 GCATTTA 3R 24346476 24346482 - 3R_24346476_24346482_- 0.823349562 0.823349562 0.823349562 0 CG5746 FBtr0334603|FBtr0334602|FBtr0273282|FBtr0084631|FBtr0084630|FBtr0334601|FBtr0273283 24343893|24345790|24345790|24345790|24345790|24345790|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 3R - 24346440 24346576 3'utr CG5746 FlyBase G54210.1 AATTAACTTGCTATACATAACACGCAAACACACACATACGCGGTCACTCAAAGCATACAATTTTAGTTTTAAGTATAAAGTTCTCTTTTTCTTAGCATTTAAGCAAACTAGTGTTTCGACGTCTTTCTACATAAACC 22 24346490 0.991484007 15 20 204 0.931034483 1.431363764 0.068965517 0.272727273 0.448275862 22 2 0 27 3R:24346440-24346576 7 CG5746 FBtr0273283|FBtr0084630|FBtr0334601|FBtr0273282|FBtr0084631|FBtr0334603|FBtr0334602 24345790|24345790|24345790|24345790|24345790|24343893|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 GCATTTA 7mer-A1 dme-miR-277-3p 3R - 24346448 24346506 3'utr CG5746 FlyBase G40938.1 AAGTATAAAGTTCTCTTTTTCTTAGCATTTAAGCAAACTAGTGTTTCGACGTCTTTCTA 6 24346491 0.994884186 5 5 63 0.857142857 0.77815125 0.285714286 0.166666667 0.285714286 6 1 0 6 3R:24346448-24346506 7 4 4210 FBgn0039186 880.5666667 39.34 60.32 0.004542529 0.101677682 0.066312997 8 9 8.5 0.01 dme-miR-7-5p 6mer2-7 TCTTCC 3R 24355848 24355853 + 3R_24355848_24355853_+ 1 1 1 0 CG6454 FBtr0273323|FBtr0273324|FBtr0330373 24355777|24355777|24355801 24356241|24356241|24356241 3R + 24355821 24355869 3'utr CG6454 FlyBase G45385.1 CGTCCCAAAAGCGTATACTCTCTATTTTCTTCCGCTTAGCTAGAACTAT 7 24355847 0.714462663 5 6 64 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3R:24355821-24355869 6 CG6454 FBtr0330373|FBtr0273323|FBtr0273324 24355801|24355777|24355777 24356241|24356241|24356241 TCTTCC 6mer2-7 dme-miR-7-5p 3R + 24355809 24355893 3'utr CG6454 FlyBase G34254.1 TTTTACGCGAATCGTCCCAAAAGCGTATACTCTCTATTTTCTTCCGCTTAGCTAGAACTATCAGCTCTGCCCAGCAACTGGAGTT 12 24355848 0.950465007 9 11 82 0.933333333 1.146128036 0.066666667 0.25 0.4 12 1 0 14 3R:24355809-24355893 6 4.5 4211 FBgn0039187 605.7933333 16.75333333 25.68 0.007428276 0.268603263 0.175233645 1 0 0.5 0.01 dme-miR-252-5p 6mer3-8 GTACTT 3R 24536417 24536422 - 3R_24536417_24536422_- 1 1 1 0 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 3R - 24536316 24536446 3'utr CG5789 FlyBase G54228.1 CTATATTCATACAACCGAAATATTGTACTTGAAACTCTAGATAGAAATTTAATAAATAATCGTCGGGTTTATTAAAATATAAATAAGTTTCACACAAATTGGTAATAAAATTGTACATTTAACTTATTGAG 15 24536423 0.978457433 10 14 105 1 1.255272505 0.111111111 0.2 0.333333333 15 0 0 18 3R:24536316-24536446 6 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 GTACTT 6mer3-8 dme-miR-252-5p 3R - 24536315 24536438 3'utr CG5789 FlyBase G40949.1 ATACAACCGAAATATTGTACTTGAAACTCTAGATAGAAATTTAATAAATAATCGTCGGGTTTATTAAAATATAAATAAGTTTCACACAAATTGGTAATAAAATTGTACATTTAACTTATTGAGT 19 24536423 0.981217905 10 19 141 1 1.380211242 0.041666667 0.210526316 0.375 19 0 0 24 3R:24536315-24536438 6 8 4212 FBgn0039207 633.5166667 14.68333333 22.4 0.012627923 0.544835414 0.357142857 1 1 1 0.01 dme-miR-1002-5p 7mer-m8 CTACTTA 3R 24536569 24536575 - 3R_24536569_24536575_- 0.592263019 0.592476532 0.592369776 0.000150967 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 3R - 24536530 24536605 3'utr CG5789 FlyBase G54229.1 ATCGGATGTTTACTTACAACATGACAAAAGCTACTTACATTCTGGTACCGGACCAGAACTGAAACACCGAGGTCCT 12 24536560 0.966165235 5 9 48 0.769230769 1 0.230769231 0.083333333 0.153846154 12 3 0 10 3R:24536530-24536605 7 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 CTACTTA 7mer-m8 dme-miR-1002-5p 3R - 24536529 24536579 3'utr CG5789 FlyBase G40950.1 AAAGCTACTTACATTCTGGTACCGGACCAGAACTGAAACACCGAGGTCCTC 9 24536562 0.946795532 4 7 26 1 1.041392685 0.090909091 0.222222222 0.363636364 9 0 0 11 3R:24536529-24536579 7 3.5 4213 FBgn0039207 633.5166667 14.68333333 22.4 0.005524717 0.238365494 0.15625 -15 -13 -14 0.01 dme-miR-34-5p 6mer2-7 ACTGCC 3R 24536690 24536695 - 3R_24536690_24536695_- 1 1 1 0 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 3R - 24536647 24536743 3'utr CG5789 FlyBase G54230.1 CATTTCCTTAGTTTAGTTAAGTTTGTTAACGAAAAGTCTAGAATGTGTACTGCCTTATACGTATTGTACTTAGATGTAATCTCCACCAGGGACTACG 76 24536689 0.64873482 15 67 595 0.88 1.643452676 0.08 0.263157895 0.44 76 11 1 88 3R:24536647-24536743 6 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 ACTGCC 6mer2-7 dme-miR-34-5p 3R - 24536640 24536720 3'utr CG5789 FlyBase G40951.1 TGTTAACGAAAAGTCTAGAATGTGTACTGCCTTATACGTATTGTACTTAGATGTAATCTCCACCAGGGACTACGTTGTAAT 67 24536689 0.985773058 10 60 502 0.908045977 1.420505837 0.16091954 0.23880597 0.413793103 67 6 2 79 3R:24536640-24536720 6 54 4214 FBgn0039207 633.5166667 14.68333333 22.4 0.085238484 3.677639047 2.410714286 -6 -6 -6 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 24536787 24536792 - 3R_24536787_24536792_- 1 1 1 0 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 3R - 24536759 24536843 3'utr CG5789 FlyBase G54231.1 CAACTCTTGGGCTCCCAATGGAAGAGGAATCTTGTCCAAAACAAAAACCGTACCAAAATGATTTTCTTGTGCACATACACATATT 32 24536785 0.864358553 10 31 204 0.974358974 1.579783597 0.025641026 0.1875 0.333333333 32 1 0 38 3R:24536759-24536843 6 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 24536765 24536891 3'utr CG5789 FlyBase G40952.1 CGGAAATCGCATTTAACCAAATCTGGTGCTTATAATGGCTCAAGGTTACAACTCTTGGGCTCCCAATGGAAGAGGAATCTTGTCCAAAACAAAAACCGTACCAAAATGATTTTCTTGTGCACATACA 38 24536784 0.985923419 14 33 271 0.875 1.146128036 0.0625 0.236842105 0.395833333 38 4 2 42 3R:24536765-24536891 6 23 4215 FBgn0039207 633.5166667 14.68333333 22.4 0.03630528 1.566401816 1.026785714 -7 -8 -7.5 0.01 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3R 24536862 24536868 - 3R_24536862_24536868_- 0.620204031 0.620204031 0.620204031 0 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 3R - 24536846 24536960 stop_codon CG5789 FlyBase G54232.1 CGGGACGAGCGAGATCGCGATCAGGATGAGAGCCAGGAGTGAGAAACGGTGGCCCAAAAAAATATCCATCGGAAATCGCATTTAACCAAATCTGGTGCTTATAATGGCTCAAGGT 18 24536868 0.969171997 8 18 102 1 1.322219295 0.047619048 0.166666667 0.285714286 18 0 0 21 3R:24536846-24536960 7 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3R - 24536765 24536891 3'utr CG5789 FlyBase G40952.1 CGGAAATCGCATTTAACCAAATCTGGTGCTTATAATGGCTCAAGGTTACAACTCTTGGGCTCCCAATGGAAGAGGAATCTTGTCCAAAACAAAAACCGTACCAAAATGATTTTCTTGTGCACATACA 38 24536860 0.985923419 14 33 271 0.875 1.146128036 0.0625 0.236842105 0.395833333 38 4 2 42 3R:24536765-24536891 7 12.5 4216 FBgn0039207 633.5166667 14.68333333 22.4 0.01973113 0.851305335 0.558035714 0 -8 -4 0.01 dme-miR-33-5p 6mer2-7 AATGCA 3R 24556347 24556352 + 3R_24556347_24556352_+ 1 1 1 0 Esyt2 FBtr0084647|FBtr0334336|FBtr0084648|FBtr0306024 24556324|24556324|24556324|24556324 24556549|24556549|24556549|24556549 3R + 24556341 24556419 3'utr Esyt2 FlyBase G45429.1 ATGCCGAATGCAGAGTCTCATTACAGCACAATCAACTCAAGAAAAACTCGACACTTTTTTACCATTTGCACTTAAATCC 9 24556361 0.811114073 7 9 63 1 1.041392685 0 0.111111111 0.272727273 9 0 0 11 3R:24556341-24556419 6 Esyt2 FBtr0306024|FBtr0084648|FBtr0334336|FBtr0084647 24556324|24556324|24556324|24556324 24556549|24556549|24556549|24556549 AATGCA 6mer2-7 dme-miR-33-5p 3R + 24556341 24556372 3'utr Esyt2 FlyBase G34278.1 ATGCCGAATGCAGAGTCTCATTACAGCACAAT 6 24556362 0.719019288 3 6 29 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 3R:24556341-24556372 6 5 4217 FBgn0266758 3194.34 129.4666667 198.0166667 0.001565269 0.038619979 0.0252504 -14 -15 -14.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 24556467 24556472 + 3R_24556467_24556472_+ 1 1 1 0 Esyt2 FBtr0084647|FBtr0334336|FBtr0084648|FBtr0306024 24556324|24556324|24556324|24556324 24556549|24556549|24556549|24556549 3R + 24556459 24556492 3'utr Esyt2 FlyBase G45430.1 AAAACAAAACCAAACTCTCTTAGTCGTGCCTCTA 6 24556477 0.966895233 2 6 34 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3R:24556459-24556492 6 Esyt2 FBtr0306024|FBtr0084648|FBtr0334336|FBtr0084647 24556324|24556324|24556324|24556324 24556549|24556549|24556549|24556549 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 24556460 24556494 3'utr Esyt2 FlyBase G34279.1 AAACAAAACCAAACTCTCTTAGTCGTGCCTCTATA 12 24556478 0.965867882 3 12 69 1 1.146128036 0.071428571 0.166666667 0.285714286 12 0 0 14 3R:24556460-24556494 6 9 4218 FBgn0266758 3194.34 129.4666667 198.0166667 0.002817483 0.069515963 0.04545072 -10 -11 -10.5 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3R 24556533 24556538 + 3R_24556533_24556538_+ 1 1 1 0 Esyt2 FBtr0084647|FBtr0334336|FBtr0084648|FBtr0306024 24556324|24556324|24556324|24556324 24556549|24556549|24556549|24556549 3R + 24556507 24556547 3'utr Esyt2 FlyBase G45431.1 AATTTATTATAGTCAATAAATCGAACTGTGTTTTCAACAAA 14 24556538 0.971012952 3 13 106 0.933333333 1.146128036 0 0.071428571 0.133333333 14 1 0 14 3R:24556507-24556547 6 Esyt2 FBtr0306024|FBtr0084648|FBtr0334336|FBtr0084647 24556324|24556324|24556324|24556324 24556549|24556549|24556549|24556549 TGTGTT 6mer3-8 dme-miR-317-3p 3R + 24556500 24556547 3'utr Esyt2 FlyBase G34280.1 AACTATCAATTTATTATAGTCAATAAATCGAACTGTGTTTTCAACAAA 15 24556539 0.9820092 6 15 108 1 1.230448921 0.058823529 0.133333333 0.235294118 15 0 0 17 3R:24556500-24556547 6 14 4219 FBgn0266758 3194.34 129.4666667 198.0166667 0.004382752 0.108135942 0.070701119 -5 -6 -5.5 0.01 dme-miR-317-3p 8mer-A1 TGTGTTCA 3R 24558703 24558710 - 3R_24558703_24558710_- 0.631136783 0.631136782 0.631136782 0 CG13624 FBtr0084672 24557366 24560507 3R - 24558676 24558733 3'utr CG13624 FlyBase G54253.1 CTGCTATTTGTTGCTTAACGTGTTGTGTTCAATTGATATCAAAAGAATTAACTTTCGA 145 24558711 0.751239715 5 143 1366 1 2.292256071 0.433673469 0.289655172 0.474489796 145 0 0 196 3R:24558676-24558733 8 CG13624 FBtr0084672 24557366 24560507 TGTGTTCA 8mer-A1 dme-miR-317-3p 3R - 24558679 24558744 3'utr CG13624 FlyBase G40969.1 AGCCTTTCTTACTGCTATTTGTTGCTTAACGTGTTGTGTTCAATTGATATCAAAAGAATTAACTTT 142 24558711 0.755416847 9 141 1367 0.976303318 2.31386722 0.450236967 0.38028169 0.582938389 142 5 0 206 3R:24558679-24558744 8 141.5 4220 FBgn0039209 1863.993333 50.61333333 77.60666667 0.075912289 2.795706006 1.823296968 1 1 1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 24558828 24558834 - 3R_24558828_24558834_- 0.801970437 0.801970437 0.801970437 0 CG13624 FBtr0084672|FBtr0084672|FBtr0084672 24557366|24557366|24557366 24560507|24560507|24560507 3R - 24558772 24558887 3'utr CG13624 FlyBase G54254.1 TTCTAATTTGCATTATCAAAATGAATACTTTTGCTCTGCTTCGATGCTAATTTTGTGATATTTGTATTCAAATTTTCTTTGTTGTGTAGTTCTTTGGGGCGGGATCCTCCTATTTT 179 24558836 0.99371934 18 168 2108 0.944954128 1.614897216 0.26146789 0.184357542 0.330275229 179 8 4 206 3R:24558772-24558887 7 CG13624 FBtr0084672|FBtr0084672|FBtr0084672 24557366|24557366|24557366 24560507|24560507|24560507 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 24558812 24558861 3'utr CG13624 FlyBase G40970.1 ACTTTTGCTCTGCTTCGATGCTAATTTTGTGATATTTGTATTCAAATTTT 126 24558836 0.715429481 11 113 1500 0.914893617 1.33243846 0.271276596 0.412698413 0.606382979 126 9 7 172 3R:24558812-24558861 7 147 4221 FBgn0039209 1863.993333 50.61333333 77.60666667 0.078862943 2.904373024 1.894167168 2 2 2 0.01 dme-miR-980-5p 7mer-A1 AAAAACA 3R 24558947 24558953 - 3R_24558947_24558953_- 0.782911824 0.782911824 0.782911824 0 CG13624 FBtr0084672 24557366 24560507 3R - 24558934 24559001 3'utr CG13624 FlyBase G54255.1 AAACATTTTCAAGGCTTCAGTTTTTATCTTTCACTTGCGGGCTACTCAAAAAACAAAAAAAAAAAAAT 25 24558966 0.98551836 9 21 174 0.833333333 1.096910013 0 0.16 0.3 25 4 1 25 3R:24558934-24559001 7 CG13624 FBtr0084672 24557366 24560507 AAAAACA 7mer-A1 dme-miR-980-5p 3R - 24558928 24559005 3'utr CG13624 FlyBase G40971.1 ATGAAAACATTTTCAAGGCTTCAGTTTTTATCTTTCACTTGCGGGCTACTCAAAAAACAAAAAAAAAAAAATATAAGA 17 24558966 0.976485257 8 14 94 0.75 1.176091259 0.1 0.117647059 0.25 17 5 0 15 3R:24558928-24559005 7 8 4222 FBgn0039209 1863.993333 50.61333333 77.60666667 0.004291861 0.158061117 0.103083927 13 13 13 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 3R 24559532 24559537 - 3R_24559532_24559537_- 0.999968729 1 0.999984365 2.21E-05 CG13624 FBtr0084674|FBtr0084673|FBtr0110795|FBtr0084672|FBtr0110796 24559278|24559278|24559278|24557366|24559278 24560507|24560507|24560207|24560507|24560207 3R - 24559304 24559756 3'utr CG13624 FlyBase G54257.1 AAAGAAAGAGGCCACTACAAAACTGAAAAGAAAATGTGAAAAATACAAAATTTCGTTTAGCCATTAAGATTGTTAAGAATCAGAGTGTTAGATGTAGATGAGCAAGTGAATTTTGTAGGGCTTTGCTACCAGTTTTACCTGCTTAATGAATAAGGGTAAAACATTCATATGATTGGATTGGAAGAATATATCGGGAATGCTAAAAATTATTGGAGTATAAGTTAAATACAACTGCGATTTATCTGTTTAAGTTTTAAATGCTATATTAACGATGTATAACTTTGGTTCAATGTTTTAGTCATAGGTTTTTACATTTAACTCAATGTGGGGAGAGAGCTTTTAAATAGATCATACGAACCTACATATTACATTTATCGGTTATTATAATTGTTTTGGCCCTCTCATCCAATATATACATATTTTATGGTCCTAGGTTGTCTTTTTTAAGTTTTC 1141 24559518 0.980294219 103 1078 9847 0.948555321 1.806825765 0.121212121 0.18404908 0.343904158 1141 53 20 1346 3R:24559304-24559756 6 CG13624 FBtr0110795|FBtr0084673|FBtr0084674|FBtr0110796|FBtr0084672 24559278|24559278|24559278|24559278|24557366 24560207|24560507|24560507|24560207|24560507 AGTTAA 6mer3-8 dme-miR-999-3p 3R - 24559371 24559760 3'utr CG13624 FlyBase G40973.1 ACGTAAAGAAAGAGGCCACTACAAAACTGAAAAGAAAATGTGAAAAATACAAAATTTCGTTTAGCCATTAAGATTGTTAAGAATCAGAGTGTTAGATGTAGATGAGCAAGTGAATTTTGTAGGGCTTTGCTACCAGTTTTACCTGCTTAATGAATAAGGGTAAAACATTCATATGATTGGATTGGAAGAATATATCGGGAATGCTAAAAATTATTGGAGTATAAGTTAAATACAACTGCGATTTATCTGTTTAAGTTTTAAATGCTATATTAACGATGTATAACTTTGGTTCAATGTTTTAGTCATAGGTTTTTACATTTAACTCAATGTGGGGAGAGAGCTTTTAAATAGATCATACGAACCTACATATTACATTTATCGGTTATTATA 759 24559518 0.924139377 76 714 6544 0.947504303 1.895659283 0.104991394 0.392621871 0.603270224 759 48 13 1101 3R:24559371-24559760 6 572 4223 FBgn0039209 1863.993333 50.61333333 77.60666667 0.30686805 11.30136986 7.370500816 -19 -19 -19 0.01 dme-miR-980-5p 7mer-A1 AAAAACA 3R 24560004 24560010 - 3R_24560004_24560010_- 0.782911824 0.782911824 0.782911824 0 CG13624 FBtr0084674|FBtr0084673|FBtr0110795|FBtr0084672|FBtr0345204|FBtr0110796|FBtr0084675 24559278|24559278|24559278|24557366|24559787|24559278|24559787 24560507|24560507|24560207|24560507|24560507|24560207|24560507 3R - 24559860 24560200 3'utr CG13624 FlyBase G54259.1 GAGGACAGAAATGTAAAGCTAACGAACCGCCCATCAAGCCAACTTTTTATCCACACCACCAACAACTGAAACCAATTCTACGACAGGATGACAATTTGATTTTGGAATGGAATCAGTCGAAAAACAGGAAACATTTTCTTGAGCTCGCAATTAGTCGAGAAAATTCTCTATTGAACCTCCTTCCCTCCTCAAAAACACAACGTTCTGTTAAATTGTTCTACATAAGTGATATAATATTGATAACCAAGATATAACTGTGATTCAAAGAGCCTGGGCTTTATATGTTTTGTATGGCAGAAAATTGAAGAAAATATTTTTGACTTTTTCGCGACCACGCCGAA 1276 24560020 0.94846074 67 1178 8247 0.933333333 1.91204483 0.134603175 0.177115987 0.333333333 1276 88 17 1470 3R:24559860-24560200 7 CG13624 FBtr0110795|FBtr0084673|FBtr0084674|FBtr0084675|FBtr0110796|FBtr0345204|FBtr0084672 24559278|24559278|24559278|24559787|24559278|24559787|24557366 24560207|24560507|24560507|24560507|24560207|24560507|24560507 AAAAACA 7mer-A1 dme-miR-980-5p 3R - 24559851 24560184 3'utr CG13624 FlyBase G40974.1 AGCTAACGAACCGCCCATCAAGCCAACTTTTTATCCACACCACCAACAACTGAAACCAATTCTACGACAGGATGACAATTTGATTTTGGAATGGAATCAGTCGAAAAACAGGAAACATTTTCTTGAGCTCGCAATTAGTCGAGAAAATTCTCTATTGAACCTCCTTCCCTCCTCAAAAACACAACGTTCTGTTAAATTGTTCTACATAAGTGATATAATATTGATAACCAAGATATAACTGTGATTCAAAGAGCCTGGGCTTTATATGTTTTGTATGGCAGAAAATTGAAGAAAATATTTTTGACTTTTTCGCGACCACGCCGAAACCGGAAAG 875 24560020 0.999998993 53 810 5515 0.933333333 1.876506504 0.141085271 0.339428571 0.551937984 875 71 15 1204 3R:24559851-24560184 7 490 4224 FBgn0039209 1863.993333 50.61333333 77.60666667 0.262876477 9.681243414 6.313890559 10 10 10 0.01 dme-miR-988-3p 6mer3-8 ACAAGG 3R 24560273 24560278 - 3R_24560273_24560278_- 1 1 1 0 CG13624 FBtr0084674|FBtr0084673|FBtr0084672|FBtr0345204|FBtr0084675 24559278|24559278|24557366|24559787|24559787 24560507|24560507|24560507|24560507|24560507 3R - 24560263 24560306 3'utr CG13624 FlyBase G54261.1 ATTGCGGGTGGTTCAACGGATTTTGTGAACAAGGTGCTGGAGAA 6 24560285 0.968466207 5 6 38 1 0.77815125 0 0 0 6 0 0 6 3R:24560263-24560306 6 CG13624 FBtr0084673|FBtr0084674|FBtr0084675|FBtr0345204|FBtr0084672 24559278|24559278|24559787|24559787|24557366 24560507|24560507|24560507|24560507|24560507 ACAAGG 6mer3-8 dme-miR-988-3p 3R - 24560265 24560315 3'utr CG13624 FlyBase G40975.1 GGAATCCGCATTGCGGGTGGTTCAACGGATTTTGTGAACAAGGTGCTGGAG 6 24560304 0.973504149 5 6 33 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 3R:24560265-24560315 6 3 4225 FBgn0039209 1863.993333 50.61333333 77.60666667 0.001609448 0.059272919 0.038656473 7 26 16.5 0.01 dme-miR-33-5p 7mer-A1 AATGCAA 3R 24623388 24623394 + 3R_24623388_24623394_+ 0.782911824 0.782911824 0.782911824 0 mld FBtr0304912|FBtr0304915|FBtr0304914|FBtr0304913|FBtr0111012 24623171|24623171|24623171|24623171|24623171 24623899|24623899|24623899|24623899|24623899 3R + 24623365 24623410 3'utr mld FlyBase G45457.1 AAAAGAACCAGCAGACTGCATTGAATGCAATCCCATATTGCACTAA 18 24623385 0.914976998 3 17 56 0.956521739 1.342422681 0.47826087 0.222222222 0.391304348 18 1 0 22 3R:24623365-24623410 7 mld FBtr0111012|FBtr0304914|FBtr0304913|FBtr0304912|FBtr0304915 24623171|24623171|24623171|24623171|24623171 24623899|24623899|24623899|24623899|24623899 AATGCAA 7mer-A1 dme-miR-33-5p 3R + 24623365 24623483 3'utr mld FlyBase G34297.1 AAAAGAACCAGCAGACTGCATTGAATGCAATCCCATATTGCACTAAAAACAAAAGAACACCTAGCGACTAAGCCAAGGATACACTCCCTCAGACACAAATCTTAAGGCTACAAAATATT 39 24623385 0.999256649 9 37 109 0.967213115 1.293730757 0.163934426 0.461538462 0.655737705 39 0 2 59 3R:24623365-24623483 7 15 4226 FBgn0263490 229.3433333 3.983333333 6.11 0.065404125 3.765690377 2.454991817 3 3 3 0.01 dme-miR-318-3p 6mer3-8 CCCAGT 3R 24623606 24623611 + 3R_24623606_24623611_+ 1 1 1 0 mld FBtr0304912|FBtr0304915|FBtr0304914|FBtr0304913|FBtr0111012 24623171|24623171|24623171|24623171|24623171 24623899|24623899|24623899|24623899|24623899 3R + 24623586 24623710 3'utr mld FlyBase G45458.2 ACTTATTGCTGATTTCCGTTCCCAGTTAGATATATATATATATTTTTTTGAAGAGCGTTTAATGAAAATAATATGACTAAGGACCTAGATATAAACAATGTACCAAGCAACACACTAAAACACAT 72 24623599 0.90443452 10 69 624 0.965116279 1.919078092 0.139534884 0.180555556 0.313953488 72 3 0 83 3R:24623586-24623710 6 mld FBtr0111012|FBtr0304914|FBtr0304913|FBtr0304912|FBtr0304915 24623171|24623171|24623171|24623171|24623171 24623899|24623899|24623899|24623899|24623899 CCCAGT 6mer3-8 dme-miR-318-3p 3R + 24623580 24623761 3'utr mld FlyBase G34299.1 ATACATACTTATTGCTGATTTCCGTTCCCAGTTAGATATATATATATATTTTTTTGAAGAGCGTTTAATGAAAATAATATGACTAAGGACCTAGATATAAACAATGTACCAAGCAACACACTAAAACACATTTTGGTGTAGAATTTAAATTAACTACTGAGACATGTGTGAGCAAGGCGCTC 72 24623599 0.987264285 15 68 601 0.964285714 1.73239376 0.125 0.361111111 0.589285714 72 3 1 108 3R:24623580-24623761 6 49.5 4227 FBgn0263490 229.3433333 3.983333333 6.11 0.215833612 12.42677824 8.101472995 7 7 7 0.01 dme-miR-304-5p 6mer2-7 GAGATT 3R 24635485 24635490 - 3R_24635485_24635490_- 1 1 1 0 puf FBtr0084668|FBtr0330309|FBtr0330308|FBtr0306172|FBtr0339135 24635268|24635268|24635268|24635268|24635268 24636457|24636403|24636457|24636457|24636457 3R - 24635412 24635514 3'utr puf FlyBase G54294.1 TGTTTAGCACGTAAGGAGTATAGAGAGATTCGTTGTCCCACGTGAAACACAAAAGGACAAAAATGATAACATTAACATAAAGTAACTAACTGGCCAGCCCCGC 62 24635486 0.979192138 8 59 402 0.957142857 1.826074803 0.414285714 0.129032258 0.228571429 62 3 0 67 3R:24635412-24635514 6 puf FBtr0339135|FBtr0330308|FBtr0306172|FBtr0084668|FBtr0330309 24635268|24635268|24635268|24635268|24635268 24636457|24636457|24636457|24636457|24636403 GAGATT 6mer2-7 dme-miR-304-5p 3R - 24635468 24635515 3'utr puf FlyBase G41005.1 ATGTTTAGCACGTAAGGAGTATAGAGAGATTCGTTGTCCCACGTGAAA 31 24635486 0.807625414 3 30 203 0.955555556 1.156347201 0.222222222 0.387096774 0.577777778 31 0 2 43 3R:24635468-24635515 6 44 4228 FBgn0039214 1184.2 11.81333333 18.17333333 0.037155886 3.724604966 2.421129861 -4 -4 -4 0.01 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 3R 24636299 24636306 - 3R_24636299_24636306_- 0.625364009 0.625364009 0.625364009 0 puf FBtr0084668|FBtr0330309|FBtr0330308|FBtr0306172|FBtr0339135 24635268|24635268|24635268|24635268|24635268 24636457|24636403|24636457|24636457|24636457 3R - 24636280 24636320 3'utr puf FlyBase G54298.1 AAGCAACCCAAGGTTGGTGCTAATGGTTGGGTTTGGGTGCG 10 24636307 0.973345582 6 10 67 1 1.146128036 0.071428571 0.4 0.571428571 10 0 0 14 3R:24636280-24636320 8 puf FBtr0339135|FBtr0330308|FBtr0306172|FBtr0084668|FBtr0330309 24635268|24635268|24635268|24635268|24635268 24636457|24636457|24636457|24636457|24636403 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 3R - 24636279 24636320 3'utr puf FlyBase G41008.1 AAGCAACCCAAGGTTGGTGCTAATGGTTGGGTTTGGGTGCGT 8 24636307 0.948334022 3 7 35 1 1 0 0.25 0.4 8 0 0 10 3R:24636279-24636320 8 8.5 4229 FBgn0039214 1184.2 11.81333333 18.17333333 0.007177842 0.719525959 0.467718269 1 1 1 0.01 dme-miR-184-5p 6mer3-8 TGATAA 3R 24636401 24636406 - 3R_24636401_24636406_- 1 1 1 0 puf FBtr0084668|FBtr0330308|FBtr0306172|FBtr0339135 24635268|24635268|24635268|24635268 24636457|24636457|24636457|24636457 3R - 24636371 24636424 stop_codon puf FlyBase G54299.1 TTCGGCAAGCCATTGGACTGATAATGGGCGCCGGCGGCTGACCACGGCTGAGCT 19 24636411 0.95127379 4 17 78 0.904761905 1.278753601 0.095238095 0.105263158 0.19047619 19 2 0 19 3R:24636371-24636424 6 puf FBtr0339135|FBtr0330308|FBtr0306172|FBtr0084668 24635268|24635268|24635268|24635268 24636457|24636457|24636457|24636457 TGATAA 6mer3-8 dme-miR-184-5p 3R - 24636368 24636423 stop_codon puf FlyBase G41009.1 TCGGCAAGCCATTGGACTGATAATGGGCGCCGGCGGCTGACCACGGCTGAGCTCCT 13 24636412 0.948989437 3 12 50 1 1.278753601 0 0.384615385 0.578947368 13 0 0 19 3R:24636368-24636423 6 15 4230 FBgn0039214 1184.2 11.81333333 18.17333333 0.012666779 1.269751693 0.82538518 5 6 5.5 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3R 24653288 24653293 + 3R_24653288_24653293_+ 1 1 1 0 ash2 FBtr0084659|FBtr0306171|FBtr0084660 24653201|24653201|24653201 24653376|24653376|24653376 3R + 24653261 24653303 3'utr ash2 FlyBase G45491.1 CTATACTTTGGAAAGCAGAAATTTGAAAAGACTATCATCATAC 27 24653283 0.596601202 4 26 150 0.972972973 1.556302501 0.027027027 0.296296296 0.486486486 27 1 0 36 3R:24653261-24653303 6 ash2 FBtr0084659|FBtr0306171|FBtr0084660 24653201|24653201|24653201 24653376|24653376|24653376 AAGACT 6mer3-8 dme-miR-14-3p 3R + 24653256 24653302 3'utr ash2 FlyBase G34324.1 ATGCACTATACTTTGGAAAGCAGAAATTTGAAAAGACTATCATCATA 29 24653295 0.928222065 7 26 149 0.921052632 1.544068044 0.052631579 0.275862069 0.447368421 29 3 0 35 3R:24653256-24653302 6 24.5 4231 FBgn0000139 191.3333333 12.33666667 18.87 0.12804878 1.985949743 1.298357181 5 -7 -1 0.01 dme-miR-1012-3p 7mer-m8 TTGACTA 3R 24659209 24659215 + 3R_24659209_24659215_+ 0.631525999 0.631525999 0.631525999 0 CG6695 FBtr0089915 24658378 24659379 3R + 24659194 24659231 stop_codon CG6695 FlyBase G45502.1 AGCTCAAGAAACTGGTTGACTATTGATCCCAAAACCGT 24 24659216 0.671720792 3 23 129 0.965517241 1.447158031 0.068965517 0.208333333 0.344827586 24 1 0 28 3R:24659194-24659231 7 CG6695 FBtr0089915 24658378 24659379 TTGACTA 7mer-m8 dme-miR-1012-3p 3R + 24659197 24659230 stop_codon CG6695 FlyBase G34330.1 TCAAGAAACTGGTTGACTATTGATCCCAAAACCG 11 24659216 0.666410168 4 11 58 1 1.278753601 0.210526316 0.454545455 0.684210526 11 0 0 19 3R:24659197-24659230 7 17 4232 FBgn0039215 827.2766667 31.71333333 48.7 0.020549353 0.536052134 0.349075975 -7 -7 -7 0.01 dme-miR-980-5p 7mer-m1 AAAAACT 3R 24717943 24717949 + 3R_24717943_24717949_+ 0.765586663 0.765586663 0.765586663 0 Rpb10 FBtr0084688 24717903 24717998 3R + 24717911 24717959 3'utr Rpb10 FlyBase G45509.1 CAATGGAAACCATCCAAACTGGACTTGGGAATAAAAACTCTAGATTTTA 16 24717930 0.849296215 3 16 74 1 1.255272505 0 0.125 0.222222222 16 0 0 18 3R:24717911-24717959 7 Rpb10 FBtr0084688 24717903 24717998 AAAAACT 7mer-m1 dme-miR-980-5p 3R + 24717919 24717954 3'utr Rpb10 FlyBase G34333.1 ACCATCCAAACTGGACTTGGGAATAAAAACTCTAGA 9 24717930 0.891071572 2 9 35 1 1.176091259 0 0.444444444 0.666666667 9 0 0 15 3R:24717919-24717954 7 6 4233 FBgn0039218 118.3333333 42 64.21333333 0.050704225 0.142857143 0.093438538 13 13 13 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3R 24760277 24760282 + 3R_24760277_24760282_+ 0.99979144 0.999958615 0.999875028 0.000118228 asp FBtr0084692 24760231 24760513 3R + 24760167 24760373 stop_codon asp FlyBase G45533.1 ACGTTTATCTCGTCCGTTTACGCCTTCGATACGATTTTGTGCAAGCTGCAGATCGACATGTTTTAGATTTAGGAAAATTCATCTTTAAATGTTTAATGTTAAAACCATTCTGTGTTGTGTTTTAAAATAGTCACATAAATTCTTAGACCATGCTAGTTTTTTGGAGACAATTAGAAATAGTTTAAGATAATCTAAGACCGTCTTAAC 88 24760275 0.831793272 25 81 906 0.923076923 1.982271233 0.153846154 0.159090909 0.288461538 88 8 0 96 3R:24760167-24760373 6 asp FBtr0084692 24760231 24760513 TGTGTT 6mer3-8 dme-miR-317-3p 3R + 24760248 24760354 3'utr asp FlyBase G34349.1 TCTTTAAATGTTTAATGTTAAAACCATTCTGTGTTGTGTTTTAAAATAGTCACATAAATTCTTAGACCATGCTAGTTTTTTGGAGACAATTAGAAATAGTTTAAGAT 39 24760275 0.877326542 13 37 392 0.964912281 1.740362689 0.192982456 0.333333333 0.543859649 39 2 0 55 3R:24760248-24760354 6 44 4234 FBgn0000140 1001.803333 19.02666667 29.17333333 0.043920796 2.312543798 1.508226691 2 2 2 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG 3R 24769845 24769850 + 3R_24769845_24769850_+ 1 1 1 0 CG13631 FBtr0084693|FBtr0339253 24769772|24769772 24770111|24770933 3R + 24769815 24769890 3'utr CG13631 FlyBase G45538.1 CGAACGGTCGCAGGAGCGGTCGAGTGCTGTGCTGTGGGTTGTCGGCGGGGGATCTCTGGCTGATCGGAGGAAGGAT 173 24769843 0.767996026 12 168 1129 0.955 1.980003372 0.545 0.12716763 0.245 173 8 1 191 3R:24769815-24769890 6 CG13631 FBtr0339253|FBtr0084693 24769772|24769772 24770933|24770111 GCTGTG 6mer2-7 dme-miR-1008-3p 3R + 24769815 24769915 3'utr CG13631 FlyBase G34353.1 CGAACGGTCGCAGGAGCGGTCGAGTGCTGTGCTGTGGGTTGTCGGCGGGGGATCTCTGGCTGATCGGAGGAAGGATAACACGGAGATATGGATTTGGATAT 206 24769843 0.770927398 13 199 1349 0.968944099 1.892094603 0.562111801 0.412621359 0.624223602 206 7 3 312 3R:24769815-24769915 6 165.5 4235 FBgn0040600 1409.473333 109.07 167.31 0.117419745 1.517374163 0.989181758 2 2 2 0.01 dme-miR-995-5p 6mer3-8 AATTCG 3R 24769925 24769930 + 3R_24769925_24769930_+ 1 1 1 0 CG13631 FBtr0084693|FBtr0339253 24769772|24769772 24770111|24770933 3R + 24769893 24769955 3'utr CG13631 FlyBase G45539.1 CACGGAGATATGGATTTGGATATGACACAAAGAATTCGCGCCACTTCAAGGACCTAAAGAATT 24 24769927 0.80762608 6 20 109 0.857142857 0.903089987 0.107142857 0.125 0.25 24 2 2 24 3R:24769893-24769955 6 CG13631 FBtr0339253|FBtr0084693 24769772|24769772 24770933|24770111 AATTCG 6mer3-8 dme-miR-995-5p 3R + 24769921 24769956 3'utr CG13631 FlyBase G34354.1 AAAGAATTCGCGCCACTTCAAGGACCTAAAGAATTC 13 24769927 0.8268191 3 13 55 1 1.278753601 0.157894737 0.307692308 0.526315789 13 0 0 19 3R:24769921-24769956 6 16.5 4236 FBgn0040600 1409.473333 109.07 167.31 0.0117065 0.151278995 0.098619329 -2 -2 -2 0.01 dme-miR-282-5p 7mer-m8 AGAGGCT 3R 24770042 24770048 + 3R_24770042_24770048_+ 0.631524569 0.631524569 0.631524569 0 CG13631 FBtr0084693|FBtr0339253 24769772|24769772 24770111|24770933 3R + 24769968 24770108 3'utr CG13631 FlyBase G45540.1 GTTCCCAAGATTCCAATGGGTAATCCAAATAGTTCGATTCGTATGACCCGAATGGGTGATCCCCGGATCACGTTAGAGGCTTCAAAGTGTTGGCAGGGGACAGGGCAATCTGTGTAACGACATTCCTTCTCAACAATAACT 147 24770041 0.975419638 16 136 859 0.920903955 1.911157609 0.271186441 0.170068027 0.310734463 147 13 1 163 3R:24769968-24770108 7 CG13631 FBtr0339253|FBtr0084693 24769772|24769772 24770933|24770111 AGAGGCT 7mer-m8 dme-miR-282-5p 3R + 24769998 24770102 3'utr CG13631 FlyBase G34355.1 AGTTCGATTCGTATGACCCGAATGGGTGATCCCCGGATCACGTTAGAGGCTTCAAAGTGTTGGCAGGGGACAGGGCAATCTGTGTAACGACATTCCTTCTCAACA 105 24770041 0.936151021 13 93 551 0.873493976 2.161368002 0.313253012 0.419047619 0.63253012 105 21 0 145 3R:24769998-24770102 7 98.5 4237 FBgn0040600 1409.473333 109.07 167.31 0.069884259 0.903089759 0.588727512 1 1 1 0.01 dme-miR-305-3p 6mer2-7 TGTGCC 3R 24770673 24770678 + 3R_24770673_24770678_+ 1 1 1 0 CG13631 FBtr0339253 24769772 24770933 3R + 24770600 24770744 3'utr CG13631 FlyBase G45545.2 TTAATATCTATACTACTGTTACTACTCTAATAATCATATTGTATGTGCCGCACGAGGAGAGGGAACTCAAAATTGTGCCCCCAAATGGGTGGTGGATGGTGTTTGCTCAAGTGATTCGTACTAAAATGGCAGCGGGAATGCGATT 57 24770674 0.962280244 20 52 302 0.936507937 1.770852012 0.206349206 0.087719298 0.174603175 57 4 0 59 3R:24770600-24770744 6 CG13631 FBtr0339253 24769772 24770933 TGTGCC 6mer2-7 dme-miR-305-3p 3R + 24770640 24770739 3'utr CG13631 FlyBase G34359.1 GTATGTGCCGCACGAGGAGAGGGAACTCAAAATTGTGCCCCCAAATGGGTGGTGGATGGTGTTTGCTCAAGTGATTCGTACTAAAATGGCAGCGGGAATG 35 24770674 0.9877235 14 32 172 0.928571429 1.716003344 0.321428571 0.371428571 0.607142857 35 4 0 52 3R:24770640-24770739 6 22 4238 FBgn0040600 1409.473333 109.07 167.31 0.015608667 0.201705327 0.131492439 -1 -1 -1 0.01 dme-miR-1006-3p 7mer-A1 GAATTTA 3R 24770792 24770798 + 3R_24770792_24770798_+ 0.823349562 0.823349562 0.823349562 0 CG13631 FBtr0339253 24769772 24770933 3R + 24770747 24770825 3'utr CG13631 FlyBase G45546.1 TCGCAGAGTGAGAAGTGCTGTAAGTGGCGAATGTTTCGAATGAGAGAATTTAGTTTAGAGAGCGGAGCATCTACAATAT 24 24770796 0.978983812 11 23 159 0.965517241 1.447158031 0.275862069 0.166666667 0.310344828 24 1 0 28 3R:24770747-24770825 7 CG13631 FBtr0339253 24769772 24770933 GAATTTA 7mer-A1 dme-miR-1006-3p 3R + 24770745 24770844 3'utr CG13631 FlyBase G34360.1 AATCGCAGAGTGAGAAGTGCTGTAAGTGGCGAATGTTTCGAATGAGAGAATTTAGTTTAGAGAGCGGAGCATCTACAATATATTTATTATACCTATGAAA 24 24770799 0.978507157 13 22 149 0.967741935 1.176091259 0.129032258 0.260869565 0.451612903 23 0 1 30 3R:24770745-24770844 7 16.5 4239 FBgn0040600 1409.473333 109.07 167.31 0.0117065 0.151278995 0.098619329 -4 -7 -5.5 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 24784792 24784798 - 3R_24784792_24784798_- 0.661615645 0.661615645 0.661615645 0 CG5805 FBtr0339255|FBtr0084743 24784550|24784735 24785395|24785395 3R - 24784737 24784855 3'utr CG5805 FlyBase G54348.1 GGGTCGCCCCTCCCCAGAGGTCGGGAGGCACTACACTTAGCTAAGCATTCGTGTGTGTGTGTTCTCTGAGTGGATAAACTAGTTTTAGTCTGCATTATAATAAAGTACAAACCAAGAAT 24 24784789 0.98179833 14 22 188 0.935483871 1.462397998 0.258064516 0.291666667 0.451612903 24 2 0 29 3R:24784737-24784855 7 CG5805 FBtr0339255|FBtr0084743 24784550|24784735 24785395|24785395 TGTGTTC 7mer-m8 dme-miR-317-3p 3R - 24784739 24784819 3'utr CG5805 FlyBase G41044.1 TTAGCTAAGCATTCGTGTGTGTGTGTTCTCTGAGTGGATAAACTAGTTTTAGTCTGCATTATAATAAAGTACAAACCAAGA 13 24784799 0.986793487 7 12 99 1 1.204119983 0.5 0.230769231 0.375 13 0 0 16 3R:24784739-24784819 7 9.5 4240 FBgn0039223 334.22 19.37333333 29.52666667 0.028424391 0.490364763 0.321743057 -9 1 -4 0.01 dme-miR-1006-3p 6mer3-8 CGAATT 3R 24784875 24784880 - 3R_24784875_24784880_- 1 1 1 0 CG5805 FBtr0339255|FBtr0084743 24784550|24784735 24785395|24785395 3R - 24784863 24784927 3'utr CG5805 FlyBase G54348.2 AGCACAGCAATGTTTGCGCCAAACAAAATACCACAAACTGGACATGCCGAATTAGAAATTAATAT 11 24784882 0.98179833 5 10 43 0.933333333 1.146128036 0 0.272727273 0.466666667 11 1 0 14 3R:24784863-24784927 6 CG5805 FBtr0339255|FBtr0084743 24784550|24784735 24785395|24785395 CGAATT 6mer3-8 dme-miR-1006-3p 3R - 24784862 24784901 3'utr CG5805 FlyBase G41045.1 AATACCACAAACTGGACATGCCGAATTAGAAATTAATATC 7 24784876 0.939945793 3 5 25 0.866666667 1.113943352 0 0.714285714 0.866666667 7 2 0 13 3R:24784862-24784901 6 7 4241 FBgn0039223 334.22 19.37333333 29.52666667 0.020944288 0.361321404 0.237073832 2 -4 -1 0.01 dme-miR-282-5p 6mer3-8 AGAGGC 3R 24785049 24785054 - 3R_24785049_24785054_- 1 1 1 0 CG5805 FBtr0339255|FBtr0084743 24784550|24784735 24785395|24785395 3R - 24785010 24785066 3'utr CG5805 FlyBase G54350.1 CCTAACACGCGAAGAGGCCGATCGGTGACAAGCATAATTTATTATACACCTAACTAA 10 24785044 0.759717706 3 9 20 1 1.146128036 0.071428571 0.4 0.571428571 10 0 0 14 3R:24785010-24785066 6 CG5805 FBtr0339255|FBtr0084743 24784550|24784735 24785395|24785395 AGAGGC 6mer3-8 dme-miR-282-5p 3R - 24785004 24785052 3'utr CG5805 FlyBase G41046.1 AGGCCGATCGGTGACAAGCATAATTTATTATACACCTAACTAAACTTGT 5 24785043 0.927729929 3 3 17 0.75 0.77815125 0 0.6 0.75 5 2 0 6 3R:24785004-24785052 4 6 4242 FBgn0039223 334.22 19.37333333 29.52666667 0.017952247 0.309704061 0.203206141 -10 -11 -10.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3R 24785117 24785122 - 3R_24785117_24785122_- 1 1 1 0 CG5805 FBtr0339255|FBtr0084743 24784550|24784735 24785395|24785395 3R - 24785100 24785136 3'utr CG5805 FlyBase G54351.1 AATATGCAAATACCCCAAAGTGTTGTAGCTTAAAGTG 10 24785115 0.678201112 4 9 55 0.923076923 1.079181246 0.076923077 0.3 0.461538462 10 1 0 12 3R:24785100-24785136 6 CG5805 FBtr0339255|FBtr0084743 24784550|24784735 24785395|24785395 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 24785097 24785136 3'utr CG5805 FlyBase G41047.1 AATATGCAAATACCCCAAAGTGTTGTAGCTTAAAGTGTAC 5 24785115 0.801735196 3 5 34 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:24785097-24785136 6 7.5 4243 FBgn0039223 334.22 19.37333333 29.52666667 0.022440309 0.387130076 0.254007677 -7 -7 -7 0.01 dme-miR-304-5p 6mer2-7 GAGATT 3R 24785310 24785315 - 3R_24785310_24785315_- 1 1 1 0 CG5805 FBtr0339255|FBtr0084743 24784550|24784735 24785395|24785395 3R - 24785223 24785375 3'utr CG5805 FlyBase G54352.1 AAACGGAAACCAACTCAAAACTGCATTTACGCGACGTACTGAGAACCACCAGAACTGGAGGAGATTCGCCCCCGATTGTAAATAACAAGAGCTAGAGAATGAATTAGAGGAGCACAAGTTAATTAGTTGAATTGCCGACGATAGCGAATTATA 28 24785310 0.937162949 15 25 103 0.9375 1.176091259 0.21875 0.142857143 0.25 28 1 1 30 3R:24785223-24785375 6 CG5805 FBtr0339255|FBtr0084743 24784550|24784735 24785395|24785395 GAGATT 6mer2-7 dme-miR-304-5p 3R - 24785211 24785357 3'utr CG5805 FlyBase G41048.1 AACTGCATTTACGCGACGTACTGAGAACCACCAGAACTGGAGGAGATTCGCCCCCGATTGTAAATAACAAGAGCTAGAGAATGAATTAGAGGAGCACAAGTTAATTAGTTGAATTGCCGACGATAGCGAATTATAAATCATCGATGG 22 24785286 0.944860469 11 21 88 0.972222222 1.544068044 0.222222222 0.545454545 0.722222222 22 1 0 35 3R:24785211-24785357 6 6 4244 FBgn0039223 334.22 19.37333333 29.52666667 0.017952247 0.309704061 0.203206141 -5 -29 -17 0.01 dme-miR-33-5p 7mer-m8 CAATGCA 3R 24797716 24797722 - 3R_24797716_24797722_- 0.674515173 0.674515173 0.674515173 0 Ude FBtr0331699|FBtr0331698|FBtr0345210 24797593|24797593|24797458 24797953|24797953|24797953 3R - 24797670 24797736 3'utr Ude FlyBase G54360.1 AAGTAACTCAACCTCAATGCAGAACTACGATATTTGGTGGACACATGGCTGCTTTCCTCTGTAACCC 14 24797723 0.935421125 3 12 77 0.866666667 0.812913357 0.133333333 0.071428571 0.133333333 14 1 1 13 3R:24797670-24797736 7 Ude FBtr0331698|FBtr0345210|FBtr0331699 24797593|24797458|24797593 24797953|24797953|24797953 CAATGCA 7mer-m8 dme-miR-33-5p 3R - 24797671 24797736 3'utr Ude FlyBase G41053.1 AAGTAACTCAACCTCAATGCAGAACTACGATATTTGGTGGACACATGGCTGCTTTCCTCTGTAACC 14 24797721 0.833636925 6 14 73 1 1.278753601 0.105263158 0.357142857 0.526315789 14 0 0 19 3R:24797671-24797736 7 7.5 4245 FBgn0039226 21.66 1.91 2.986666667 0.346260388 3.926701571 2.511160714 1 -1 0 0.01 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 24805499 24805506 - 3R_24805499_24805506_- 0.384061861 0.385558739 0.3848103 0.001058397 CG5807 FBtr0331697 24805443 24805557 3R - 24805486 24805534 3'utr CG5807 FlyBase G54386.2 AATTTAAGGAAAACTACCTACGATATTGCTGTGATTCAATGACTTAATT 19 24805509 0.981679455 7 18 145 0.958333333 1.361727836 0.083333333 0.157894737 0.333333333 19 1 0 23 3R:24805486-24805534 8 CG5807 FBtr0331697 24805443 24805557 CTGTGATT 8mer-m1 dme-miR-308-3p 3R - 24805451 24805529 3'utr CG5807 FlyBase G41070.1 AAGGAAAACTACCTACGATATTGCTGTGATTCAATGACTTAATTAAAACTTTAAATGATGCTTTAGGGATGCTATAATA 22 24805508 0.771724634 10 22 195 1 1.556302501 0.222222222 0.363636364 0.611111111 22 0 0 36 3R:24805451-24805529 8 15.5 4246 FBgn0027539 323.6833333 14.69666667 22.53666667 0.047886309 1.054660921 0.687768082 3 2 2.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 24805706 24805712 - 3R_24805706_24805712_- 0.753115072 0.754176803 0.753645937 0.000750735 CG5807 FBtr0084739|FBtr0084739|FBtr0084739 24805665|24805665|24805665 24806410|24806410|24806410 3R - 24805666 24805734 3'utr CG5807 FlyBase G54387.1 ACTAACAAGCGTCTAAAACTTATGTGATAAAAAATAATAATAAACAAAGCATTTTACTAAATTAATCGA 84 24805714 0.976377962 5 80 517 0.95959596 1.977723605 0.090909091 0.130952381 0.262626263 84 4 0 95 3R:24805666-24805734 7 CG5807 FBtr0084739|FBtr0084739|FBtr0084739 24805665|24805665|24805665 24806410|24806410|24806410 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 24805689 24805736 3'utr CG5807 FlyBase G41071.1 ACACTAACAAGCGTCTAAAACTTATGTGATAAAAAATAATAATAAACA 64 24805714 0.803519252 7 61 386 0.966666667 1.939519253 0.133333333 0.359375 0.544444444 64 3 0 87 3R:24805689-24805736 7 73 4247 FBgn0027539 323.6833333 14.69666667 22.53666667 0.225529066 4.967112724 3.239165804 2 2 2 0.01 dme-miR-2a-2-5p 7mer-m1 GATGAGG 3R 24805795 24805801 - 3R_24805795_24805801_- 0.825582066 0.681760229 0.753671148 0.101697441 CG5807 FBtr0084739 24805665 24806410 3R - 24805774 24805836 3'utr CG5807 FlyBase G54388.1 ATAAGATTTTAACAATGTTCCTTAAGCAGCGAAACGATGAGGCGTGTTCATTTCATTTTACGG 110 24805821 0.977067508 9 107 648 0.9609375 1.788875116 0.0625 0.154545455 0.2734375 110 4 1 123 3R:24805774-24805836 7 CG5807 FBtr0084739 24805665 24806410 GATGAGG 7mer-m1 dme-miR-2a-2-5p 3R - 24805785 24805834 3'utr CG5807 FlyBase G41072.1 AAGATTTTAACAATGTTCCTTAAGCAGCGAAACGATGAGGCGTGTTCATT 70 24805821 0.983464342 4 68 395 0.982608696 1.752048448 0.113043478 0.471428571 0.67826087 70 1 1 113 3R:24805785-24805834 7 30.5 4248 FBgn0027539 323.6833333 14.69666667 22.53666667 0.094227898 2.075300522 1.353350096 20 20 20 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT 3R 24805815 24805820 - 3R_24805815_24805820_- 1 1 1 0 CG5807 FBtr0084739 24805665 24806410 3R - 24805774 24805836 3'utr CG5807 FlyBase G54388.1 ATAAGATTTTAACAATGTTCCTTAAGCAGCGAAACGATGAGGCGTGTTCATTTCATTTTACGG 110 24805821 0.977067508 9 107 648 0.9609375 1.788875116 0.0625 0.154545455 0.2734375 110 4 1 123 3R:24805774-24805836 6 CG5807 FBtr0084739 24805665 24806410 GTTCCT 6mer2-7 dme-miR-276a-3p 3R - 24805785 24805834 3'utr CG5807 FlyBase G41072.1 AAGATTTTAACAATGTTCCTTAAGCAGCGAAACGATGAGGCGTGTTCATT 70 24805821 0.983464342 4 68 395 0.982608696 1.752048448 0.113043478 0.471428571 0.67826087 70 1 1 113 3R:24805785-24805834 6 52 4249 FBgn0027539 323.6833333 14.69666667 22.53666667 0.160650842 3.538217283 2.307350984 1 1 1 0.01 dme-miR-1006-3p 6mer2-7 GAATTT 3R 24805914 24805919 - 3R_24805914_24805919_- 1 1 1 0 CG5807 FBtr0084739 24805665 24806410 3R - 24805866 24805920 3'utr CG5807 FlyBase G54389.1 AGAATTTCGTTTCTTGTCGTTCAGAGTGAATTCCATTTCATACATGTTTTTCGCT 12 24805909 0.9908168 5 10 111 0.9375 0.875061263 0.25 0.333333333 0.5 12 0 1 15 3R:24805866-24805920 6 CG5807 FBtr0084739 24805665 24806410 GAATTT 6mer2-7 dme-miR-1006-3p 3R - 24805868 24805931 3'utr CG5807 FlyBase G41073.1 AGGCGTAGTTTAGAATTTCGTTTCTTGTCGTTCAGAGTGAATTCCATTTCATACATGTTTTTCG 10 24805890 0.987842201 3 10 104 1 1.255272505 0 0.7 0.833333333 10 0 0 18 3R:24805868-24805931 6 6 4250 FBgn0027539 323.6833333 14.69666667 22.53666667 0.018536636 0.40825584 0.266232806 -10 -29 -19.5 0.01 dme-miR-307a-3p 6mer2-7 GTTGTG 3R 24806155 24806160 - 3R_24806155_24806160_- 1 1 1 0 CG5807 FBtr0084739 24805665 24806410 3R - 24806106 24806315 3'utr CG5807 FlyBase G54391.2 TACCAAGTATCGTAACCTTAGTCGTAAGAGCAGTCGCAATACCACCGCTAGTCGCAAGGCAAACGAAATGAACTGTTAAGACACGAGAAAAACATGGGAGATGGGCAGCTGAAACTATATAATATACCTTTACATATGTTATATGATCACGTATAGTTGTGCAGAACTGATACTAATATTTAAATTTTGCAATGTTAACTGTTGTGCTTA 83 24806157 0.912604631 24 76 433 0.91 1.481920138 0.16 0.180722892 0.32 83 7 2 91 3R:24806106-24806315 6 CG5807 FBtr0084739 24805665 24806410 GTTGTG 6mer2-7 dme-miR-307a-3p 3R - 24806130 24806170 3'utr CG5807 FlyBase G41074.2 ATCACGTATAGTTGTGCAGAACTGATACTAATATTTAAATT 21 24806158 0.605658899 8 19 124 0.962962963 1.414973348 0.037037037 0.238095238 0.407407407 21 1 0 26 3R:24806130-24806170 6 25.5 4251 FBgn0027539 323.6833333 14.69666667 22.53666667 0.078780701 1.735087321 1.131489425 -3 -2 -2.5 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 24806206 24806212 - 3R_24806206_24806212_- 0.658999527 0.658999527 0.658999527 0 CG5807 FBtr0084739 24805665 24806410 3R - 24806106 24806315 3'utr CG5807 FlyBase G54391.2 TACCAAGTATCGTAACCTTAGTCGTAAGAGCAGTCGCAATACCACCGCTAGTCGCAAGGCAAACGAAATGAACTGTTAAGACACGAGAAAAACATGGGAGATGGGCAGCTGAAACTATATAATATACCTTTACATATGTTATATGATCACGTATAGTTGTGCAGAACTGATACTAATATTTAAATTTTGCAATGTTAACTGTTGTGCTTA 83 24806214 0.912604631 24 76 433 0.91 1.481920138 0.16 0.180722892 0.32 83 7 2 91 3R:24806106-24806315 7 CG5807 FBtr0084739 24805665 24806410 GGCAGCT 7mer-m8 dme-miR-980-3p 3R - 24806189 24806287 3'utr CG5807 FlyBase G41075.1 AGCAGTCGCAATACCACCGCTAGTCGCAAGGCAAACGAAATGAACTGTTAAGACACGAGAAAAACATGGGAGATGGGCAGCTGAAACTATATAATATAC 23 24806214 0.824993052 7 21 65 0.911764706 1.491361694 0.147058824 0.391304348 0.588235294 23 3 0 31 3R:24806189-24806287 7 20.5 4252 FBgn0027539 323.6833333 14.69666667 22.53666667 0.063333505 1.394874121 0.909628753 2 2 2 0.01 dme-miR-995-5p 6mer2-7 ATTCGG 3R 24828498 24828503 - 3R_24828498_24828503_- 1 0.999999989 0.999999994 0 CG31357 FBtr0084735 24828277 24828669 3R - 24828472 24828565 3'utr CG31357 FlyBase G54399.1 TTATTACTATTGATAAGCTAGAGAACCCGCGAACACCCTCGATTTGAATTCCGATTTCGATTATTCGGCAACTGAATGCTGCTGCTGCTGCGCG 10 24828488 0.980565621 8 9 63 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 3R:24828472-24828565 6 CG31357 FBtr0084735 24828277 24828669 ATTCGG 6mer2-7 dme-miR-995-5p 3R - 24828446 24828536 3'utr CG31357 FlyBase G41083.1 CGAACACCCTCGATTTGAATTCCGATTTCGATTATTCGGCAACTGAATGCTGCTGCTGCTGCGCGTGCGCAGGTCTATTGATTATTTGACT 8 24828489 0.985420386 6 7 56 0.866666667 1.113943352 0.2 0.5 0.733333333 8 2 0 13 3R:24828446-24828536 6 4 4253 FBgn0051357 282.3566667 20.68 31.79333333 0.01416648 0.193423598 0.125812539 -15 -14 -14.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 24854437 24854442 + 3R_24854437_24854442_+ 1 1 1 0 nct FBtr0301865|FBtr0306087|FBtr0334570|FBtr0084705 24854236|24854089|24854385|24854236 24854869|24854569|24854869|24854569 3R + 24854393 24854498 3'utr nct FlyBase G45585.1 AAAGAATATCTGATCACGTGCCGAAGATGATTGGTTGCTGAATATGATCTAAAACAAAAAACAGACTTAACAAAGACACTAAAATGATATTCTAACTCGTCTTATT 108 24854437 0.979653696 13 104 720 0.96031746 2.08278537 0.03968254 0.148148148 0.26984127 108 5 0 121 3R:24854393-24854498 6 nct FBtr0334570|FBtr0301865|FBtr0306087 24854385|24854236|24854089 24854869|24854869|24854569 TGATCT 6mer3-8 dme-bantam-3p 3R + 24854408 24854502 3'utr nct FlyBase G34380.2 ACGTGCCGAAGATGATTGGTTGCTGAATATGATCTAAAACAAAAAACAGACTTAACAAAGACACTAAAATGATATTCTAACTCGTCTTATTTAAA 81 24854437 0.747772255 16 76 525 0.915254237 1.556302501 0.033898305 0.345679012 0.550847458 81 8 2 108 3R:24854408-24854502 6 77 4254 FBgn0039234 994.94 43.80666667 67.10333333 0.077391602 1.75772333 1.14748398 0 0 0 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 24854785 24854790 + 3R_24854785_24854790_+ 1 1 1 0 nct FBtr0301865|FBtr0334570 24854236|24854385 24854869|24854869 3R + 24854647 24854808 3'utr nct FlyBase G45587.1 TAGGATTAACCAACCCAATTGAACCTCTGATAATGCCAAGGAAGAGATGTCTGTACAAATATTGACAAGAAACTGCTATAACTTATAAATCACTGGAAATATTTATACCTTCTGCATCTATTGCGATACTGAACTTAATGATCTGAAATCATTACTTCATAG 112 24854785 0.831493117 26 107 741 0.956834532 1.822821645 0.079136691 0.214285714 0.366906475 112 5 1 133 3R:24854647-24854808 6 nct FBtr0334570|FBtr0301865 24854385|24854236 24854869|24854869 TGATCT 6mer3-8 dme-bantam-3p 3R + 24854755 24854840 3'utr nct FlyBase G34382.1 CTTCTGCATCTATTGCGATACTGAACTTAATGATCTGAAATCATTACTTCATAGAAGACAAATAATTATTATAACGACTTTAAATT 50 24854785 0.976912572 7 49 329 0.973333333 1.86332286 0.053333333 0.4 0.6 50 2 0 73 3R:24854755-24854840 6 51.5 4255 FBgn0039234 994.94 43.80666667 67.10333333 0.051761915 1.175620149 0.767473052 0 0 0 0.01 dme-miR-965-3p 7mer-m8 TACGCTT 3R 24868756 24868762 - 3R_24868756_24868762_- 0.620204855 0.620204855 0.620204855 0 CycB3 FBtr0334578 24867932 24868800 3R - 24868585 24868800 3'utr CycB3 FlyBase G54409.1 GACAGCCTCAAAGTTTAGCCAAATTCAACATGATACGATACGCTTCACTTAGGCTCTAAGACGCTTCTATTCCCAATATTAGCCCCATCCCGACGAAACAGCGGATCCCCGCCTTAATCTAAAAACCCCTGATTTTACCCCTTACCTAGTGTTCCCGTCAAGTCCTCGCAATTTATTATATTTTAATTATTATTGTGACCTTCGCATTATTGACAT 260 24868762 0.999926671 28 239 1955 0.919732441 1.594234654 0.163879599 0.130769231 0.244147157 260 18 6 275 3R:24868585-24868800 7 CycB3 FBtr0084728|FBtr0334578 24868354|24867932 24868800|24868800 TACGCTT 7mer-m8 dme-miR-965-3p 3R - 24868631 24868801 stop_codon CycB3 FlyBase G41090.1 GGACAGCCTCAAAGTTTAGCCAAATTCAACATGATACGATACGCTTCACTTAGGCTCTAAGACGCTTCTATTCCCAATATTAGCCCCATCCCGACGAAACAGCGGATCCCCGCCTTAATCTAAAAACCCCTGATTTTACCCCTTACCTAGTGTTCCCGTCAAGTCCTCGCA 106 24868762 0.983092285 20 95 716 0.90797546 1.471291711 0.233128834 0.358490566 0.582822086 106 11 4 148 3R:24868631-24868801 7 122 4256 FBgn0015625 158.3333333 6.95 10.59666667 0.770526316 17.55395683 11.51305442 0 0 0 0.01 dme-miR-980-5p 7mer-m1 AAAAACT 3R 24871295 24871301 - 3R_24871295_24871301_- 0.765586663 0.765586663 0.765586663 0 CG3744 FBtr0334576|FBtr0334574|FBtr0334577 24871200|24871200|24871200 24871951|24871951|24871951 3R - 24871281 24871333 3'utr CG3744 FlyBase G54417.1 GTTCTTAGAAACCCGCGTTTGGCTGAAGCAACAAAAACTGAATTAAATTTAAT 14 24871315 0.953367903 7 14 64 1 1.255272505 0.222222222 0.142857143 0.333333333 14 0 0 18 3R:24871281-24871333 7 CG3744 FBtr0334577|FBtr0334576|FBtr0334574 24871200|24871200|24871200 24871951|24871951|24871951 AAAAACT 7mer-m1 dme-miR-980-5p 3R - 24871291 24871328 3'utr CG3744 FlyBase G41100.1 TAGAAACCCGCGTTTGGCTGAAGCAACAAAAACTGAAT 9 24871315 0.938366261 5 8 30 1 1.204119983 0.4375 0.555555556 0.75 9 0 0 16 3R:24871291-24871328 7 4.5 4257 FBgn0039240 558 14.77333333 22.68666667 0.008064516 0.304602888 0.198354393 14 14 14 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 3R 24871690 24871695 - 3R_24871690_24871695_- 1 1 1 0 CG3744 FBtr0334576|FBtr0334574|FBtr0334577 24871200|24871200|24871200 24871951|24871951|24871951 3R - 24871638 24871718 3'utr CG3744 FlyBase G54419.1 GGAAAGTTGAATGAATGAAAGTTTACCTGCCACCCAATATTAGACTTCAGATCAAGACCAAGCAGCTTATTGTAATTAATT 16 24871678 0.974711513 7 14 90 0.944444444 1.230448921 0.277777778 0.125 0.222222222 16 1 0 17 3R:24871638-24871718 6 CG3744 FBtr0334577|FBtr0334576|FBtr0334574 24871200|24871200|24871200 24871951|24871951|24871951 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 3R - 24871642 24871717 3'utr CG3744 FlyBase G41101.1 GAAAGTTGAATGAATGAAAGTTTACCTGCCACCCAATATTAGACTTCAGATCAAGACCAAGCAGCTTATTGTAATT 13 24871679 0.978462576 8 11 74 0.80952381 1.230448921 0.142857143 0.461538462 0.666666667 13 4 0 17 3R:24871642-24871717 6 9 4258 FBgn0039240 558 14.77333333 22.68666667 0.016129032 0.609205776 0.396708786 -17 -16 -16.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3R 24922285 24922290 + 3R_24922285_24922290_+ 0.999893207 1 0.999946604 7.55E-05 CG11168 FBtr0306089|FBtr0084715|FBtr0337009|FBtr0337010 24920050|24922185|24922185|24922185 24922385|24922385|24922385|24922385 3R + 24922272 24922352 3'utr CG11168 FlyBase G45600.1 TTTTACTCATTTGCTAGTCGTTGATGCCATCTCGATGCTGGCTTTGCTCCACATAAGGCAGCTCACATGTTAAGTATTTTG 31 24922283 0.773283678 12 30 262 0.973684211 1.568201724 0.157894737 0.193548387 0.342105263 31 1 0 37 3R:24922272-24922352 6 CG11168 FBtr0337010|FBtr0337009|FBtr0084715|FBtr0306089 24922185|24922185|24922185|24920050 24922385|24922385|24922385|24922385 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3R + 24922269 24922337 3'utr CG11168 FlyBase G34389.1 TTTTTTTACTCATTTGCTAGTCGTTGATGCCATCTCGATGCTGGCTTTGCTCCACATAAGGCAGCTCAC 28 24922282 0.946826023 9 27 216 0.888888889 1.602059991 0.311111111 0.392857143 0.622222222 28 5 0 40 3R:24922269-24922337 6 23.5 4259 FBgn0039249 138.3333333 5.443333333 8.356666667 0.169879518 4.317207593 2.812126047 2 3 2.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 24935214 24935219 - 3R_24935214_24935219_- 1 1 1 0 Osbp FBtr0084801 24934867 24935398 3R - 24935195 24935240 3'utr Osbp FlyBase G54445.1 GCATATTGTAGTACCACACTTTGATCTAGAGCATATTTATATATAT 43 24935220 0.715473304 6 42 296 0.962264151 1.707570176 0.132075472 0.209302326 0.358490566 43 2 0 51 3R:24935195-24935240 6 Osbp FBtr0084801 24934867 24935398 TGATCT 6mer3-8 dme-bantam-3p 3R - 24935194 24935279 3'utr Osbp FlyBase G41117.1 AGCGGGACACGCTCCGACTGATTTCGGAGCAGCACATACGCATATTGTAGTACCACACTTTGATCTAGAGCATATTTATATATATA 36 24935220 0.846820347 7 35 210 0.964912281 1.740362689 0.105263158 0.444444444 0.649122807 36 2 0 55 3R:24935194-24935279 6 32 4260 FBgn0020626 533.3433333 19.94666667 30.62 0.059998875 1.604278075 1.045068583 1 1 1 0.01 dme-miR-252-5p 6mer3-8 GTACTT 3R 24939081 24939086 - 3R_24939081_24939086_- 1 1 1 0 ssh FBtr0084799|FBtr0301612|FBtr0084800|FBtr0301613 24938708|24939001|24939001|24939001 24939428|24939804|24939428|24939804 3R - 24939010 24939126 3'utr ssh FlyBase G54460.1 GAGGGCAAACAAAACAACCTATGGAAATGAAACTGTATTTGTACTTTTAAATTACTTGTAACTGTATACATATTTATTTTATATTATGCAAGAACTGCCTACGAATAAACGATTTAT 48 24939105 0.982895212 16 45 339 0.925925926 1.698970004 0.074074074 0.125 0.222222222 48 4 0 50 3R:24939010-24939126 6 ssh FBtr0084800|FBtr0301613|FBtr0084799|FBtr0301612 24939001|24939001|24938708|24939001 24939428|24939804|24939428|24939804 GTACTT 6mer3-8 dme-miR-252-5p 3R - 24939006 24939128 3'utr ssh FlyBase G41125.1 GAGAGGGCAAACAAAACAACCTATGGAAATGAAACTGTATTTGTACTTTTAAATTACTTGTAACTGTATACATATTTATTTTATATTATGCAAGAACTGCCTACGAATAAACGATTTATTGTA 30 24939105 0.97558687 11 28 187 0.926829268 1.278753601 0.219512195 0.366666667 0.536585366 30 2 1 38 3R:24939006-24939128 6 11.5 4261 FBgn0029157 492.83 13.26666667 20.39666667 0.023334618 0.866834171 0.563817617 19 19 19 0.01 dme-miR-283-5p 8mer-A1 TGATATTA 3R 24947361 24947368 + 3R_24947361_24947368_+ 0.592192292 0.592192292 0.592192292 0 Nmnat FBtr0337012|FBtr0084749 24947303|24947303 24947400|24947400 3R + 24947325 24947379 3'utr Nmnat FlyBase G45633.1 ACGCGGATTAAGACAGGGGCGCTGGAAGCTATTTGTTGATATTATATAAATATGC 28 24947357 0.865384915 5 26 212 0.928571429 1.113943352 0.178571429 0 0 28 1 1 26 3R:24947325-24947379 8 Nmnat FBtr0084749|FBtr0337012 24947303|24947303 24947400|24947400 TGATATTA 8mer-A1 dme-miR-283-5p 3R + 24947334 24947375 3'utr Nmnat FlyBase G34407.1 AAGACAGGGGCGCTGGAAGCTATTTGTTGATATTATATAAAT 15 24947357 0.977301319 4 15 133 1 1.322219295 0.142857143 0.333333333 0.523809524 15 0 0 21 3R:24947334-24947375 8 15 4262 FBgn0039254 101.0166667 10.28666667 15.83333333 0.148490348 1.458198315 0.947368421 4 4 4 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3R 25029128 25029134 + 3R_25029128_25029134_+ 0.443131018 0.443131018 0.443131018 0 Hr96 FBtr0084756 25028997 25029351 3R + 25029108 25029169 3'utr Hr96 FlyBase G45643.1 AATGTTAGATTTTAATCGAATGTGATTGTTAGATTTGCATATACTGCATAGATTTTATATTT 80 25029134 0.731407423 8 78 856 0.978494624 1.658011397 0.182795699 0.15 0.268817204 80 1 1 91 3R:25029108-25029169 7 Hr96 FBtr0084756 25028997 25029351 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 25029071 25029148 3'utr Hr96 FlyBase G34415.1 TTGTTGTTGTTGATGTCTGTTTTATCTTGTCGCTTGTAATGTTAGATTTTAATCGAATGTGATTGTTAGATTTGCATA 62 25029134 0.990784611 12 62 650 1 1.959041392 0.175824176 0.35483871 0.56043956 62 0 0 91 3R:25029071-25029148 7 66.5 4263 FBgn0015240 237.9533333 10.15 15.50666667 0.279466562 6.551724138 4.288478074 -6 -6 -6 0.01 dme-miR-1012-3p 6mer2-7 TGACTA 3R 25029661 25029666 - 3R_25029661_25029666_- 1 1 1 0 Smg6 FBtr0084796 25029427 25029778 3R - 25029617 25029708 3'utr Smg6 FlyBase G54482.1 GGAGCGAGCTCGAGCTATTATATTACCTACATTATACATAAATGACTATGTAAGACGGGGTCGGCAGATGCGGACACATACGCTGGCTGCGG 11 25029686 0.968148557 6 10 58 0.846153846 1.041392685 0.461538462 0.181818182 0.307692308 11 2 0 11 3R:25029617-25029708 6 Smg6 FBtr0084796 25029427 25029778 TGACTA 6mer2-7 dme-miR-1012-3p 3R - 25029617 25029696 3'utr Smg6 FlyBase G41140.1 AGCTATTATATTACCTACATTATACATAAATGACTATGTAAGACGGGGTCGGCAGATGCGGACACATACGCTGGCTGCGG 7 25029677 0.988423747 6 6 41 0.9 0.954242509 0.1 0.428571429 0.6 7 1 0 9 3R:25029617-25029696 6 3.5 4264 FBgn0039260 358.6633333 12.99666667 19.73666667 0.009758455 0.26929982 0.17733491 20 11 15.5 0.01 dme-miR-14-3p 8mer-A1 AAGACTGA 3R 25033955 25033962 - 3R_25033955_25033962_- 0.643565469 0.643565469 0.643565469 0 CG6422 FBtr0084794 25033874 25034581 3R - 25033944 25033985 3'utr CG6422 FlyBase G54490.1 ATCCAATAATTATACGTTAGTGGAAGACTGAAACAGTATAAT 9 25033966 0.957546438 2 8 46 0.75 0.954242509 0 0.222222222 0.416666667 9 3 0 9 3R:25033944-25033985 8 CG6422 FBtr0084794 25033874 25034581 AAGACTGA 8mer-A1 dme-miR-14-3p 3R - 25033944 25033979 3'utr CG6422 FlyBase G41144.1 TAATTATACGTTAGTGGAAGACTGAAACAGTATAAT 8 25033967 0.933473657 3 7 35 1 1 0.1 0.125 0.3 8 0 0 10 3R:25033944-25033979 8 8 4265 FBgn0039261 1441.73 59.75 92.00666667 0.005548889 0.133891213 0.086950221 4 5 4.5 0.01 dme-miR-305-5p 6mer2-7 GTACAA 3R 25034459 25034464 - 3R_25034459_25034464_- 1 0.999987627 0.999993814 8.77E-06 CG6422 FBtr0334507|FBtr0084794|FBtr0113281|FBtr0084795 25034143|25033874|25034143|25034143 25034581|25034581|25034581|25034581 3R - 25034384 25034479 3'utr CG6422 FlyBase G54493.1 TTTTAACCATTGCGTGTACAAGATAAAATCCCGATTCATGGCGAGCATATATAACGAACATGTGGGATCTAGGATTAACGATTAAAGTATGATAAC 19 25034442 0.973510708 10 17 117 0.875 1.322219295 0.166666667 0.210526316 0.375 19 3 0 21 3R:25034384-25034479 6 CG6422 FBtr0113281|FBtr0084795|FBtr0334507|FBtr0084794 25034143|25034143|25034143|25033874 25034581|25034581|25034581|25034581 GTACAA 6mer2-7 dme-miR-305-5p 3R - 25034412 25034559 3'utr CG6422 FlyBase G41148.1 AATTCTTTTTTAAATGATATTGAATGGACTCCCACAATCCGTTGAATTGCTTAGAGACGTTAAATTATAATTTTTAGATTTTTTAACCATTGCGTGTACAAGATAAAATCCCGATTCATGGCGAGCATATATAACGAACATGTGGGAT 25 25034466 0.978702959 13 24 168 0.96875 1.491361694 0.25 0.24 0.40625 25 1 0 31 3R:25034412-25034559 6 5 4266 FBgn0039261 1441.73 59.75 92.00666667 0.003468056 0.083682008 0.054343888 -22 2 -10 0.01 dme-miR-283-5p 7mer-m8 TGATATT 3R 25034539 25034545 - 3R_25034539_25034545_- 0.620203677 0.620203677 0.620203677 0 CG6422 FBtr0334507|FBtr0084794|FBtr0113281|FBtr0084795 25034143|25033874|25034143|25034143 25034581|25034581|25034581|25034581 3R - 25034507 25034558 3'utr CG6422 FlyBase G54494.1 ATTCTTTTTTAAATGATATTGAATGGACTCCCACAATCCGTTGAATTGCTTA 23 25034535 0.846731167 5 22 143 0.962962963 1.414973348 0.222222222 0.173913043 0.296296296 23 1 0 26 3R:25034507-25034558 7 CG6422 FBtr0113281|FBtr0084795|FBtr0334507|FBtr0084794 25034143|25034143|25034143|25033874 25034581|25034581|25034581|25034581 TGATATT 7mer-m8 dme-miR-283-5p 3R - 25034412 25034559 3'utr CG6422 FlyBase G41148.1 AATTCTTTTTTAAATGATATTGAATGGACTCCCACAATCCGTTGAATTGCTTAGAGACGTTAAATTATAATTTTTAGATTTTTTAACCATTGCGTGTACAAGATAAAATCCCGATTCATGGCGAGCATATATAACGAACATGTGGGAT 25 25034535 0.978702959 13 24 168 0.96875 1.491361694 0.25 0.24 0.40625 25 1 0 31 3R:25034412-25034559 7 15.5 4267 FBgn0039261 1441.73 59.75 92.00666667 0.010750973 0.259414226 0.168466053 -10 -10 -10 0.01 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG 3R 25040529 25040535 - 3R_25040529_25040535_- 0.70297214 0.70297214 0.70297214 0 5PtaseI FBtr0299660|FBtr0299662 25040425|25040425 25040818|25040600 3R - 25040513 25040542 3'utr 5PtaseI FlyBase G54506.1 GTGTTATGTACCTGTTATGTTAAACGCGTC 18 25040536 0.736106242 4 17 181 0.947368421 1.255272505 0.842105263 0.055555556 0.105263158 18 1 0 18 3R:25040513-25040542 7 5PtaseI FBtr0299662|FBtr0299660 25040425|25040425 25040600|25040818 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 25040511 25040543 3'utr 5PtaseI FlyBase G41157.1 TGTGTTATGTACCTGTTATGTTAAACGCGTCCA 11 25040536 0.870601188 4 11 109 1 1.278753601 0.526315789 0.454545455 0.684210526 11 0 0 19 3R:25040511-25040543 7 14.5 4268 FBgn0259178 182.6666667 9.633333333 14.71333333 0.079379562 1.505190311 0.98550068 1 1 1 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 25041103 25041109 - 3R_25041103_25041109_- 0.661615645 0.661615645 0.661615645 0 5PtaseI FBtr0299661 25041064 25041727 3R - 25041089 25041156 3'utr 5PtaseI FlyBase G54507.1 AAACTATTTCTTTGAATCTGTGTTTTAAGTATGTACATTGTTTATTATGTGTTCGTCTTCTTTAAGAA 25 25041109 0.707009066 10 22 307 0.833333333 1.397940009 0.366666667 0.16 0.3 25 5 0 25 3R:25041089-25041156 7 5PtaseI FBtr0299661 25041064 25041727 TGTGTTC 7mer-m8 dme-miR-317-3p 3R - 25041088 25041122 3'utr 5PtaseI FlyBase G41158.1 ACATTGTTTATTATGTGTTCGTCTTCTTTAAGAAA 18 25041111 0.683460874 8 14 224 0.826086957 0.801632346 0.260869565 0.166666667 0.347826087 18 2 2 19 3R:25041088-25041122 7 17 4269 FBgn0259178 182.6666667 9.633333333 14.71333333 0.093065693 1.764705882 1.15541459 0 2 1 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT 3R 25041193 25041198 - 3R_25041193_25041198_- 1 1 1 0 5PtaseI FBtr0299661 25041064 25041727 3R - 25041171 25041288 3'utr 5PtaseI FlyBase G54508.1 TAAATATGTCGAGCGATTGTAGTTATAATCTTAAACTCATGTGCATTTAAAAGCCATACCGAAATCTCTTATATCCATCTTATGTACCCTGTTCCTTTTCGCAGTGAAAGCGATTCAG 72 25041192 0.936389645 15 71 582 0.988636364 1.939519253 0.079545455 0.180555556 0.329545455 72 1 0 87 3R:25041171-25041288 6 5PtaseI FBtr0299661 25041064 25041727 GTTCCT 6mer2-7 dme-miR-276a-3p 3R - 25041165 25041239 3'utr 5PtaseI FlyBase G41160.1 AAAGCCATACCGAAATCTCTTATATCCATCTTATGTACCCTGTTCCTTTTCGCAGTGAAAGCGATTCAGCCTAAG 32 25041192 0.719074125 8 31 258 1 1.716003344 0.038461538 0.46875 0.673076923 32 0 0 52 3R:25041165-25041239 6 27.5 4270 FBgn0259178 182.6666667 9.633333333 14.71333333 0.150547445 2.85467128 1.869053013 -6 -6 -6 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 3R 25099527 25099533 + 3R_25099527_25099533_+ 0.620204264 0.620204266 0.620204265 0 CG33096 FBtr0301976|FBtr0301975|FBtr0114464 25099278|25099278|25099278 25099785|25099785|25099785 3R + 25099496 25099546 3'utr CG33096 FlyBase G45704.1 TTTATTCAGCCGCATCAATACATTCGAGAATTGCATTTTTTAAAAGATTAT 6 25099526 0.987448321 2 5 48 1 0.77815125 0.166666667 0 0 6 0 0 6 3R:25099496-25099546 7 CG33096 FBtr0301976|FBtr0114464|FBtr0301975 25099278|25099278|25099278 25099785|25099785|25099785 TGCATTT 7mer-m8 dme-miR-277-3p 3R + 25099491 25099541 3'utr CG33096 FlyBase G34463.1 AATTATTTATTCAGCCGCATCAATACATTCGAGAATTGCATTTTTTAAAAG 8 25099526 0.897773284 3 6 57 0.785714286 1.041392685 0.357142857 0.375 0.642857143 8 3 0 11 3R:25099491-25099541 7 5.5 4271 FBgn0053096 531.5033333 20.77333333 31.74 0.010348007 0.264762516 0.173282924 1 1 1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 25099598 25099603 + 3R_25099598_25099603_+ 1 1 1 0 CG33096 FBtr0301976|FBtr0301976|FBtr0301976|FBtr0301975|FBtr0301975|FBtr0301975|FBtr0114464|FBtr0114464|FBtr0114464 25099278|25099278|25099278|25099278|25099278|25099278|25099278|25099278|25099278 25099785|25099785|25099785|25099785|25099785|25099785|25099785|25099785|25099785 3R + 25099584 25099626 3'utr CG33096 FlyBase G45705.1 CATTCTTACAGCATTGTGATCCTGGTCCCCGTATTAATTGAAT 22 25099597 0.632671549 7 22 168 1 1.414973348 0.269230769 0.181818182 0.307692308 22 0 0 26 3R:25099584-25099626 6 CG33096 FBtr0301976|FBtr0301976|FBtr0301976|FBtr0114464|FBtr0114464|FBtr0114464|FBtr0301975|FBtr0301975|FBtr0301975 25099278|25099278|25099278|25099278|25099278|25099278|25099278|25099278|25099278 25099785|25099785|25099785|25099785|25099785|25099785|25099785|25099785|25099785 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 25099578 25099631 3'utr CG33096 FlyBase G34464.1 GATCCCCATTCTTACAGCATTGTGATCCTGGTCCCCGTATTAATTGAATAAGCA 21 25099597 0.71950174 5 19 162 0.90625 1.161368002 0.5 0.380952381 0.59375 21 2 1 29 3R:25099578-25099631 6 21 4272 FBgn0053096 531.5033333 20.77333333 31.74 0.039510571 1.010911425 0.661625709 1 1 1 0.01 dme-bantam-3p 6mer2-7 GATCTC 3R 25100329 25100334 + 3R_25100329_25100334_+ 1 1 1 0 CG33096 FBtr0344621|FBtr0344622 25099278|25099278 25102146|25102146 3R + 25100311 25100348 3'utr CG33096 FlyBase G45708.1 AAAGAGTGGCATCTAACCGATCTCTAAAGGACAGTCAA 67 25100335 0.836178027 4 60 309 0.851851852 1.236789099 0.283950617 0.164179104 0.308641975 67 9 3 69 3R:25100311-25100348 6 CG33096 FBtr0344622|FBtr0344621 25099278|25099278 25102146|25102146 GATCTC 6mer2-7 dme-bantam-3p 3R + 25100310 25100355 3'utr CG33096 FlyBase G34466.1 AAAAGAGTGGCATCTAACCGATCTCTAAAGGACAGTCAAAACGTCT 30 25100335 0.772226681 5 27 139 0.909090909 1 0.431818182 0.366666667 0.568181818 30 1 3 40 3R:25100310-25100355 6 47.5 4273 FBgn0053096 531.5033333 20.77333333 31.74 0.089369148 2.286585366 1.496534342 -6 -6 -6 0.01 dme-miR-252-5p 7mer-m8 GTACTTA 3R 25101706 25101712 + 3R_25101706_25101712_+ 0.588299917 0.588299917 0.588299917 0 CG33096 FBtr0344621|FBtr0344622 25099278|25099278 25102146|25102146 3R + 25101701 25101730 3'utr CG33096 FlyBase G45709.1 TACGAGTACTTATAAGCCTGATCCACTTTT 11 25101713 0.746617979 2 11 63 1 1.176091259 0 0.272727273 0.466666667 11 0 0 15 3R:25101701-25101730 7 CG33096 FBtr0344622|FBtr0344621 25099278|25099278 25102146|25102146 GTACTTA 7mer-m8 dme-miR-252-5p 3R + 25101702 25101731 3'utr CG33096 FlyBase G34467.1 ACGAGTACTTATAAGCCTGATCCACTTTTA 7 25101713 0.748781915 2 7 42 1 1.041392685 0 0.428571429 0.636363636 7 0 0 11 3R:25101702-25101731 7 9 4274 FBgn0053096 531.5033333 20.77333333 31.74 0.016933102 0.433247754 0.283553875 -7 -7 -7 0.01 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 25101960 25101967 + 3R_25101960_25101967_+ 0.625364269 0.625364269 0.625364269 0 CG33095 FBtr0100204|FBtr0084774 25101745|25101745 25102146|25102146 3R + 25101921 25101979 3'utr CG33095 FlyBase G45710.1 TTTAGTAGTACCTTAAGTTTGAAATTTTTACAGTGATTTTGCATTTATATTAAGTAACA 34 25101959 0.991963354 7 34 383 1 1.633468456 0.046511628 0.264705882 0.418604651 34 0 0 43 3R:25101921-25101979 8 CG33095 FBtr0084774|FBtr0100204 25101745|25101745 25102146|25102146 TGCATTTA 8mer-A1 dme-miR-277-3p 3R + 25101935 25101978 3'utr CG33095 FlyBase G34468.1 AAGTTTGAAATTTTTACAGTGATTTTGCATTTATATTAAGTAAC 29 25101959 0.716080602 6 28 311 0.97826087 1.653212514 0.043478261 0.310344828 0.565217391 29 1 0 45 3R:25101935-25101978 8 31 4275 FBgn0053095 476.96 16.58 25.46 0.064994968 1.869722557 1.217596229 1 1 1 0.01 dme-miR-970-3p 7mer-m8 TCTTATG 3R 25214463 25214469 - 3R_25214463_25214469_- 0.658999343 0.658999343 0.658999343 0 CG13663 FBtr0084873 25214323 25214542 3R - 25214429 25214504 3'utr CG13663 FlyBase G54591.1 TCTAGACAATTTTATAATATATTCACTAACTTGTATCTTATGTAGCTATGTGGCTGTAAAAGTATATTTTATTATG 100 25214454 0.982180937 9 93 812 0.941666667 1.752048448 0.158333333 0.14 0.283333333 100 6 1 113 3R:25214429-25214504 7 CG13663 FBtr0084873 25214323 25214542 TCTTATG 7mer-m8 dme-miR-970-3p 3R - 25214432 25214474 3'utr CG13663 FlyBase G41209.1 TTGTATCTTATGTAGCTATGTGGCTGTAAAAGTATATTTTATT 69 25214454 0.780881244 6 66 524 0.980582524 2.004321374 0.174757282 0.362318841 0.572815534 69 2 0 101 3R:25214432-25214474 7 70 4276 FBgn0039291 41.33333333 6.506666667 9.923333333 1.693548387 10.75819672 7.05408129 -15 -15 -15 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3R 25224050 25224055 + 3R_25224050_25224055_+ 0.955828262 0.999978101 0.977903182 0.031218623 CG11851 FBtr0084808 25223739 25224118 3R + 25224033 25224071 3'utr CG11851 FlyBase G45738.1 TTTTCGTTTTGTCCATGCCAAAGTTGTGAAGATCACCAG 17 25224056 0.782408185 3 14 111 0.882352941 0.875061263 0.411764706 0.0625 0.117647059 16 1 1 15 3R:25224033-25224071 6 CG11851 FBtr0084808 25223739 25224118 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 25224032 25224074 3'utr CG11851 FlyBase G34488.1 ATTTTCGTTTTGTCCATGCCAAAGTTGTGAAGATCACCAGAAT 11 25224048 0.890811743 6 10 79 0.941176471 0.903089987 0.529411765 0.454545455 0.647058824 11 0 1 16 3R:25224032-25224074 6 13.5 4277 FBgn0039293 588.9733333 30.00333333 45.61333333 0.022921241 0.449950006 0.295966092 -6 2 -2 0.01 dme-miR-932-5p 6mer2-7 GAATTG 3R 25233718 25233723 - 3R_25233718_25233723_- 1 1 1 0 CG10420 FBtr0084870 25233634 25234044 3R - 25233701 25233735 3'utr CG10420 FlyBase G54596.1 TTGTATGCTACAGAATTGTTCTCCAAACAGATTAT 40 25233720 0.77147291 3 39 241 0.983050847 1.462397998 0.271186441 0.35 0.559322034 40 0 1 58 3R:25233701-25233735 6 CG10420 FBtr0084870 25233634 25234044 GAATTG 6mer2-7 dme-miR-932-5p 3R - 25233703 25233735 3'utr CG10420 FlyBase G41213.1 TTGTATGCTACAGAATTGTTCTCCAAACAGATT 18 25233720 0.786524585 2 18 120 1 1.397940009 0.28 0.333333333 0.52 18 0 0 25 3R:25233703-25233735 6 29 4278 FBgn0039296 113.6666667 7.593333333 11.63333333 0.255131965 3.819139596 2.492836676 -3 -3 -3 0.01 dme-miR-11-3p 7mer-m1 TGTGATG 3R 25233928 25233934 - 3R_25233928_25233934_- 0.612071121 0.612071121 0.612071121 0 CG10420 FBtr0084870 25233634 25234044 3R - 25233811 25233994 3'utr CG10420 FlyBase G54597.1 TGAGTTGGAATGAAATTCGCAGCCAAACCATAGAATACGATAGCTAAGATGCCAAGTACTTGTGATGCAAAAATAATGCTCTTTGTCATTAACTTAGGATAGCAATCAATCATGCCAAACATCTACAGGATTTTCGTTATCAAATATAGTCTCTTACTTAAGATTATTTTAAGTGTGATTTTTT 198 25233935 0.876666322 33 186 1262 0.918803419 1.429348473 0.179487179 0.136363636 0.269230769 198 12 7 215 3R:25233811-25233994 7 CG10420 FBtr0084870 25233634 25234044 TGTGATG 7mer-m1 dme-miR-11-3p 3R - 25233820 25233996 3'utr CG10420 FlyBase G41214.1 GCTGAGTTGGAATGAAATTCGCAGCCAAACCATAGAATACGATAGCTAAGATGCCAAGTACTTGTGATGCAAAAATAATGCTCTTTGTCATTAACTTAGGATAGCAATCAATCATGCCAAACATCTACAGGATTTTCGTTATCAAATATAGTCTCTTACTTAAGATTATTTTAAGTG 124 25233935 0.93320124 19 113 751 0.944723618 1.496006599 0.190954774 0.427419355 0.64321608 124 6 5 188 3R:25233820-25233996 7 116.5 4279 FBgn0039296 113.6666667 7.593333333 11.63333333 1.024926686 15.34240562 10.01432665 1 1 1 0.01 dme-miR-980-5p 7mer-m1 AAAAACT 3R 25246305 25246311 - 3R_25246305_25246311_- 0.765586663 0.765586663 0.765586663 0 RpS27 FBtr0304693|FBtr0084868 25245953|25245953 25246352|25246352 3R - 25246286 25246370 stop_codon RpS27 FlyBase G54605.1 CGCAGGAAGCCACAGTAAAATGGGACTCGCGATGAACCACAAATTATTAATTTTTTAATAAAAACTCTAAAACGTAAAGAAACCA 28 25246339 0.957456771 7 25 120 0.941176471 1.505149978 0.264705882 0.178571429 0.323529412 28 2 0 32 3R:25246286-25246370 7 RpS27 FBtr0084868|FBtr0304693 25245953|25245953 25246352|25246352 AAAAACT 7mer-m1 dme-miR-980-5p 3R - 25246254 25246362 stop_codon RpS27 FlyBase G41220.2 GCCACAGTAAAATGGGACTCGCGATGAACCACAAATTATTAATTTTTTAATAAAAACTCTAAAACGTAAAGAAACCACAGAACCCATACGAGAGAAAGCTTGTAATTCA 25 25246339 0.979096879 9 22 105 0.96969697 1.505149978 0.424242424 0.28 0.454545455 25 1 0 32 3R:25246254-25246362 7 5.5 4280 FBgn0039300 9031.133333 1582.773333 2405.786667 0.000609004 0.003474913 0.002286154 28 28 28 0.01 dme-miR-263a-5p 7mer-m1 TGCCATT 3R 25260204 25260210 + 3R_25260204_25260210_+ 0.765586644 0.765586663 0.765586654 7.07E-08 CG11857 FBtr0084814 25260035 25260759 3R + 25260136 25260287 3'utr CG11857 FlyBase G45795.1 AGCGACAGCGCAGCGACCAAGGATGTGGGGTCGCCAACAGCATCGTCCATCAAACCACCGCAGATCATTGCCATTGAGGACTACTAGAGAAAGCTACCGAAAGCAGCCCGGAATGGGAACCAGCAGCATAACATCAACCAGAAACAAGCTTA 74 25260210 0.967310802 11 74 389 1 1.908485019 0.308641975 0.094594595 0.172839506 74 0 0 81 3R:25260136-25260287 7 CG11857 FBtr0084814 25260035 25260759 TGCCATT 7mer-m1 dme-miR-263a-5p 3R + 25260160 25260225 3'utr CG11857 FlyBase G34545.1 GTGGGGTCGCCAACAGCATCGTCCATCAAACCACCGCAGATCATTGCCATTGAGGACTACTAGAGA 20 25260210 0.968648981 4 19 105 0.966666667 1.462397998 0.2 0.4 0.6 20 1 0 29 3R:25260160-25260225 7 42.5 4281 FBgn0039303 1484.506667 100.39 153.7466667 0.02862904 0.423348939 0.276428757 -6 -6 -6 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 25260357 25260362 + 3R_25260357_25260362_+ 1 1 1 0 CG11857 FBtr0084814 25260035 25260759 3R + 25260330 25260401 3'utr CG11857 FlyBase G45796.1 CACTGTTGAGTTGTCGTACGGCGTCTTGTGCAAAATACCTTGTTTATTGTTTAATCTAACTGCTTGTTTAAA 30 25260356 0.899577833 12 29 245 1 1.556302501 0.055555556 0.133333333 0.277777778 30 0 0 36 3R:25260330-25260401 6 CG11857 FBtr0084814 25260035 25260759 GTGCAA 6mer3-8 dme-miR-92b-3p 3R + 25260329 25260403 3'utr CG11857 FlyBase G34546.1 TCACTGTTGAGTTGTCGTACGGCGTCTTGTGCAAAATACCTTGTTTATTGTTTAATCTAACTGCTTGTTTAAATT 35 25260355 0.738979637 11 29 279 0.795918367 1.290034611 0.020408163 0.285714286 0.489795918 35 9 1 39 3R:25260329-25260403 6 25.5 4282 FBgn0039303 1484.506667 100.39 153.7466667 0.017177424 0.254009363 0.165857254 1 2 1.5 0.01 dme-miR-12-5p 6mer3-8 AATACT 3R 25260455 25260460 + 3R_25260455_25260460_+ 1 1 1 0 CG11857 FBtr0084814 25260035 25260759 3R + 25260424 25260488 3'utr CG11857 FlyBase G45797.1 TCTATCTATTGTAAATCCCAAACGATACCGAAATACTGCAGATCAGCTCTAATTTAGTTTTTCAT 35 25260449 0.923555346 7 33 215 0.952380952 1.602059991 0.166666667 0.171428571 0.30952381 35 2 0 40 3R:25260424-25260488 6 CG11857 FBtr0084814 25260035 25260759 AATACT 6mer3-8 dme-miR-12-5p 3R + 25260434 25260489 3'utr CG11857 FlyBase G34547.1 GTAAATCCCAAACGATACCGAAATACTGCAGATCAGCTCTAATTTAGTTTTTCATC 17 25260457 0.70451467 5 16 85 0.958333333 1.361727836 0.041666667 0.352941176 0.541666667 17 1 0 23 3R:25260434-25260489 6 23.5 4283 FBgn0039303 1484.506667 100.39 153.7466667 0.015830175 0.23408706 0.152848842 6 -2 2 0.01 dme-miR-932-5p 7mer-A1 GAATTGA 3R 25260689 25260695 + 3R_25260689_25260695_+ 0.731659037 0.731659037 0.731659037 0 CG11857 FBtr0084814 25260035 25260759 3R + 25260676 25260710 3'utr CG11857 FlyBase G45799.1 GTTAAAAAAAGGCGAATTGAAAACTGAAACTATAG 23 25260693 0.944898103 3 18 51 0.962962963 1.414973348 0.074074074 0.173913043 0.296296296 23 1 0 26 3R:25260676-25260710 7 CG11857 FBtr0084814 25260035 25260759 GAATTGA 7mer-A1 dme-miR-932-5p 3R + 25260678 25260733 3'utr CG11857 FlyBase G34549.1 TAAAAAAAGGCGAATTGAAAACTGAAACTATAGGAAGTGTACACTGGGTGCGTCTT 29 25260693 0.945472052 6 27 123 0.901960784 1.662757832 0.058823529 0.517241379 0.725490196 29 5 0 46 3R:25260678-25260733 7 16.5 4284 FBgn0039303 1484.506667 100.39 153.7466667 0.011114804 0.164359 0.1073194 -4 -4 -4 0.01 dme-miR-8-3p 6mer2-7 AGTATT 3R 25261224 25261229 - 3R_25261224_25261229_- 1 1 1 0 CG10425 FBtr0084867 25260961 25261255 3R - 25261203 25261247 3'utr CG10425 FlyBase G54611.1 TTGTCCCGCTGCCCTTAAAGTATTCCCAAGTGCCCATAATTAAAT 13 25261226 0.620116571 7 12 86 0.923076923 1.079181246 0.076923077 0 0 13 1 0 12 3R:25261203-25261247 6 CG10425 FBtr0084867 25260961 25261255 AGTATT 6mer2-7 dme-miR-8-3p 3R - 25261202 25261269 stop_codon CG10425 FlyBase G41225.1 TGGAGTCCAAGTGAAATCTCTCTTGTCCCGCTGCCCTTAAAGTATTCCCAAGTGCCCATAATTAAATC 12 25261225 0.984016065 5 10 76 0.851851852 1.361727836 0.407407407 0.833333333 0.925925926 12 4 0 23 3R:25261202-25261269 6 11 4285 FBgn0039304 196.3333333 17.07333333 25.98666667 0.056027165 0.644279578 0.423293997 -3 -4 -3.5 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 25303944 25303951 + 3R_25303944_25303951_+ 0.500120318 0.500120318 0.500120318 0 CG31370 FBtr0290055 25303865 25303986 3R + 25303926 25303984 3'utr CG31370 FlyBase G45812.1 ATGAGCGTTCCATTATATGTACTTAATAAAGTGTATAAGGCTATTGTTTTGATATCGCT 20 25303943 0.933594614 3 17 182 0.88 1.041392685 0.32 0.25 0.4 20 2 1 22 3R:25303926-25303984 8 CG31370 FBtr0290055 25303865 25303986 GTACTTAA 8mer-A1 dme-miR-252-5p 3R + 25303927 25303973 3'utr CG31370 FlyBase G34556.1 TGAGCGTTCCATTATATGTACTTAATAAAGTGTATAAGGCTATTGTT 18 25303943 0.765026138 3 17 153 0.914285714 1.505149978 0.314285714 0.555555556 0.771428571 18 3 0 32 3R:25303927-25303973 8 15.5 4286 FBgn0051370 220 19.25 29.63 0.070454545 0.805194805 0.523118461 1 1 1 0.01 dme-miR-277-3p 6mer3-8 TGCATT 3R 25329626 25329631 - 3R_25329626_25329631_- 1 0.999108601 0.9995543 0.000630315 CHKov2 FBtr0084849 25329528 25329692 3R - 25329571 25329663 3'utr CHKov2 FlyBase G54637.1 AGAGAACGAATAGTGTAATAATAATATTGTATTGCATTCATACAAACATGTTGTTCACAAACTATCTCAAAATGCTAGGTGTTAGTATAAGCT 10 25329615 0.978712798 5 9 71 1 1.146128036 0 0.4 0.571428571 10 0 0 14 3R:25329571-25329663 6 CHKov2 FBtr0084849 25329528 25329692 TGCATT 6mer3-8 dme-miR-277-3p 3R - 25329597 25329640 3'utr CHKov2 FlyBase G41246.1 ATATTGTATTGCATTCATACAAACATGTTGTTCACAAACTATCT 5 25329615 0.975365016 2 4 32 1 0.84509804 0 0.4 0.571428571 5 0 0 7 3R:25329597-25329640 6 3 4287 FBgn0039328 141.6666667 12.04 18.51333333 0.021176471 0.249169435 0.162045373 -16 -16 -16 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3R 25331532 25331538 - 3R_25331532_25331538_- 0.521223855 0.521223855 0.521223855 0 CG10669 FBtr0300687 25331361 25331774 3R - 25331507 25331559 3'utr CG10669 FlyBase G54646.1 TAATAAATTAAAACAATACTGTGTGATTAAAAGGGGAATAGTTTGTAGTTTGT 29 25331540 0.722624947 6 27 190 0.939393939 1.491361694 0.090909091 0.137931034 0.242424242 29 2 0 31 3R:25331507-25331559 7 CG10669 FBtr0300687 25331361 25331774 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 25331508 25331556 3'utr CG10669 FlyBase G41251.1 TAAATTAAAACAATACTGTGTGATTAAAAGGGGAATAGTTTGTAGTTTG 19 25331540 0.972831485 4 16 140 0.791666667 1.278753601 0.083333333 0.263157895 0.416666667 19 5 0 19 3R:25331508-25331556 7 22.5 4288 FBgn0039329 90.66666667 3.293333333 4.993333333 0.248161765 6.831983806 4.506008011 2 2 2 0.01 dme-miR-988-3p 7mer-m8 ACAAGGG 3R 25340067 25340073 + 3R_25340067_25340073_+ 0.671796207 0.671796207 0.671796207 0 CG11902 FBtr0300735 25339910 25340088 3R + 25340055 25340087 3'utr CG11902 FlyBase G45830.1 AAAAATAAAATTACAAGGGTTACAAATAAACGA 12 25340074 0.758450375 2 12 50 1 1.176091259 0 0.166666667 0.333333333 12 0 0 15 3R:25340055-25340087 7 CG11902 FBtr0300735 25339910 25340088 ACAAGGG 7mer-m8 dme-miR-988-3p 3R + 25340044 25340084 3'utr CG11902 FlyBase G34568.1 AATGTAAAGATAAAAATAAAATTACAAGGGTTACAAATAAA 18 25340074 0.946825159 2 18 78 1 1.361727836 0 0.222222222 0.391304348 18 0 0 23 3R:25340044-25340084 7 15 4289 FBgn0028647 178 4.693333333 7.203333333 0.084269663 3.196022727 2.082369273 -7 -7 -7 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3R 25350214 25350220 - 3R_25350214_25350220_- 0.521223855 0.521223855 0.521223855 0 Fur1 FBtr0336805 25349196 25352006 3R - 25350200 25350283 3'utr Fur1 FlyBase G54658.1 TCGGAACTAAGTACAAACTATTAGTTTACTTAACAAATTCTATACAAAATTACTTATCTCCTTTGTGATTTATATTTCTATTTT 34 25350214 0.992554955 10 33 383 0.976744186 1.62324929 0 0.264705882 0.418604651 34 1 0 42 3R:25350200-25350283 7 Fur1 FBtr0336805 25349196 25352006 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 25350200 25350232 3'utr Fur1 FlyBase G41258.2 ACTTATCTCCTTTGTGATTTATATTTCTATTTT 13 25350214 0.746988941 2 12 157 0.95 1.278753601 0 0.461538462 0.65 13 1 0 19 3R:25350200-25350232 7 21 4290 FBgn0004509 573.7666667 14.10666667 21.43 0.036600244 1.488657845 0.979934671 -6 -6 -6 0.01 dme-miR-14-3p 7mer-m8 AAGACTG 3R 25350907 25350913 - 3R_25350907_25350913_- 0.671795832 0.671795832 0.671795832 0 Fur1 FBtr0336805 25349196 25352006 3R - 25350890 25350933 3'utr Fur1 FlyBase G54659.1 CAGTTTAGAGTTCATAGTAAAAGACTGTTTCTTAAAATTAAAAC 8 25350905 0.841280557 6 8 67 1 0.903089987 0.125 0 0 8 0 0 8 3R:25350890-25350933 7 Fur1 FBtr0336805 25349196 25352006 AAGACTG 7mer-m8 dme-miR-14-3p 3R - 25350888 25350934 3'utr Fur1 FlyBase G41260.1 GCAGTTTAGAGTTCATAGTAAAAGACTGTTTCTTAAAATTAAAACCA 6 25350905 0.701270268 4 6 59 1 1 0.3 0.333333333 0.6 6 0 0 10 3R:25350888-25350934 7 6.5 4291 FBgn0004509 573.7666667 14.10666667 21.43 0.011328647 0.460775047 0.303313112 -8 -8 -8 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 3R 25478078 25478083 - 3R_25478078_25478083_- 1 1 1 0 XNP FBtr0084837|FBtr0344719|FBtr0344718|FBtr0084838 25477866|25477866|25477866|25477866 25478255|25478255|25478255|25478255 3R - 25477995 25478121 3'utr XNP FlyBase G54678.1 CCATAACCGAGCGCATAAGATTATTTTTTCGTCAACTCAGTTAAGTTCGAAACTGTCCTAATTCATGTGTAGACTTACATTAGATACAAGTAAAAACAACAAAATATACAGCATATGATTTAAATAC 21 25478063 0.98639154 7 15 133 0.695652174 0.903089987 0.043478261 0.095238095 0.173913043 21 6 1 16 3R:25477995-25478121 6 XNP FBtr0344718|FBtr0084838|FBtr0084837|FBtr0344719 25477866|25477866|25477866|25477866 25478255|25478255|25478255|25478255 AGTTAA 6mer3-8 dme-miR-999-3p 3R - 25478035 25478092 3'utr XNP FlyBase G41275.1 CGTCAACTCAGTTAAGTTCGAAACTGTCCTAATTCATGTGTAGACTTACATTAGATAC 10 25478062 0.982669464 6 9 64 0.928571429 0.812913357 0.214285714 0.4 0.571428571 10 0 1 13 3R:25478035-25478092 6 9 4292 FBgn0039338 1523.39 40.88333333 63.2 0.005907877 0.220138606 0.142405063 -20 -21 -20.5 0.01 dme-miR-283-5p 7mer-m1 GATATTT 3R 25478179 25478185 - 3R_25478179_25478185_- 0.765548109 0.765586663 0.765567386 2.73E-05 XNP FBtr0084837|FBtr0344719|FBtr0344718|FBtr0084838 25477866|25477866|25477866|25477866 25478255|25478255|25478255|25478255 3R - 25478128 25478206 3'utr XNP FlyBase G54679.1 AGGTAATTCGTCGACTTTGTCGATATTTCCTGTGGACTAAAGTTACAAATGTGGTTTATCCTATCTAATTACAATTACC 84 25478175 0.693715915 14 83 734 0.98989899 1.991226076 0.080808081 0.142857143 0.272727273 84 1 0 98 3R:25478128-25478206 7 XNP FBtr0344718|FBtr0084838|FBtr0084837|FBtr0344719 25477866|25477866|25477866|25477866 25478255|25478255|25478255|25478255 GATATTT 7mer-m1 dme-miR-283-5p 3R - 25478140 25478202 3'utr XNP FlyBase G41276.1 AATTCGTCGACTTTGTCGATATTTCCTGTGGACTAAAGTTACAAATGTGGTTTATCCTATCTA 47 25478175 0.72978289 10 45 395 1 1.838849091 0.115942029 0.326086957 0.550724638 46 0 0 69 3R:25478140-25478202 7 26 4293 FBgn0039338 1523.39 40.88333333 63.2 0.017067199 0.635955972 0.411392405 -10 -10 -10 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 25486395 25486401 - 3R_25486395_25486401_- 0.658999527 0.658999527 0.658999527 0 Dhap-at FBtr0084897|FBtr0330374 25485616|25485616 25486603|25486603 3R - 25486306 25486425 3'utr Dhap-at FlyBase G54700.1 TCATCGTGGTGTTGTCGCCGCTGTGGCAGCTGCTCCACTGGATCATCGTATCCACCCACTCATTCACGTAGGTTAACGGGGTGTCTGGTTAGGATGGGTCGATACTAATAGTATCCTATT 16 25486402 0.982202586 6 14 111 0.857142857 0.954242509 0.047619048 0.25 0.428571429 16 2 1 18 3R:25486306-25486425 7 Dhap-at FBtr0330374|FBtr0084897 25485616|25485616 25486603|25486603 GGCAGCT 7mer-m8 dme-miR-980-3p 3R - 25486343 25486423 3'utr Dhap-at FlyBase G41290.1 ATCGTGGTGTTGTCGCCGCTGTGGCAGCTGCTCCACTGGATCATCGTATCCACCCACTCATTCACGTAGGTTAACGGGGTG 14 25486402 0.972233932 6 14 85 1 1.176091259 0.133333333 0.071428571 0.133333333 14 0 0 15 3R:25486343-25486423 7 10.5 4294 FBgn0040212 241.5966667 8.49 13.08666667 0.043460865 1.236749117 0.802343352 1 1 1 0.01 dme-miR-14-3p 7mer-m8 AAGACTG 3R 25493192 25493198 + 3R_25493192_25493198_+ 0.671795714 0.671795734 0.671795724 0 CG5112 FBtr0084878 25493128 25493262 3R + 25493133 25493204 3'utr CG5112 FlyBase G45851.1 GTTTATGATGTATGATCGATCAACTTATTGTTAGAGAACATAGGGTGTGGGTAACGCTGAAGACTGTCGCTT 33 25493190 0.970304922 10 30 174 0.918918919 1.531478917 0.378378378 0.090909091 0.189189189 33 3 0 34 3R:25493133-25493204 7 CG5112 FBtr0084878 25493128 25493262 AAGACTG 7mer-m8 dme-miR-14-3p 3R + 25493136 25493204 3'utr CG5112 FlyBase G34581.1 TATGATGTATGATCGATCAACTTATTGTTAGAGAACATAGGGTGTGGGTAACGCTGAAGACTGTCGCTT 30 25493190 0.966748859 10 30 163 1 1.602059991 0.25 0.3 0.475 30 0 0 40 3R:25493136-25493204 7 25 4295 FBgn0039341 334.3133333 22.37333333 33.99666667 0.074780146 1.117401669 0.735366212 2 2 2 0.01 dme-miR-970-3p 6mer3-8 TCTTAT 3R 25493811 25493816 - 3R_25493811_25493816_- 0.999998924 1 0.999999462 7.78E-07 CG33494 FBtr0089607|FBtr0336802 25493577|25493479 25494014|25494014 3R - 25493739 25493839 3'utr CG33494 FlyBase G54707.1 AAATCAAGGTCAATACAAAATGCTCTTATCAACATATATGAATCACATATGTATTAAGATGTAAAATCTCATTTTTAATTAAGCATTAATGTGAAATGAAA 15 25493816 0.856308969 11 14 97 0.947368421 0.954242509 0.105263158 0.133333333 0.315789474 15 0 1 18 3R:25493739-25493839 6 CG33494 FBtr0336802|FBtr0089607 25493479|25493577 25494014|25494014 TCTTAT 6mer3-8 dme-miR-970-3p 3R - 25493737 25493833 3'utr CG33494 FlyBase G41295.1 AGGTCAATACAAAATGCTCTTATCAACATATATGAATCACATATGTATTAAGATGTAAAATCTCATTTTTAATTAAGCATTAATGTGAAATGAAAGT 14 25493819 0.905837664 9 13 91 0.958333333 1.06069784 0.041666667 0.571428571 0.75 14 0 1 23 3R:25493737-25493833 6 5.5 4296 FBgn0053494 1664.706667 279.3966667 423.6866667 0.003303885 0.019685274 0.012981291 0 3 1.5 0.01 dme-miR-304-5p 8mer-A1 TGAGATTA 3R 25493955 25493962 - 3R_25493955_25493962_- 0.625363359 0.625363359 0.625363359 0 CG33494 FBtr0089607|FBtr0336802 25493577|25493479 25494014|25494014 3R - 25493909 25494021 stop_codon CG33494 FlyBase G54708.1 TGGGTAACCAGTTCCAAAGTCCACTTAGTCTTTGCTCTCGAATCGGTCATCCAAGCCTTTGAGATTACATTTAAATATGTCATGAAATACATAGCATGATATACATACATATA 64 25493963 0.9826232 14 60 522 0.930555556 1.826074803 0.125 0.109375 0.208333333 64 5 0 67 3R:25493909-25494021 8 CG33494 FBtr0336802|FBtr0089607 25493479|25493577 25494014|25494014 TGAGATTA 8mer-A1 dme-miR-304-5p 3R - 25493947 25494006 3'utr CG33494 FlyBase G41296.1 AAAGTCCACTTAGTCTTTGCTCTCGAATCGGTCATCCAAGCCTTTGAGATTACATTTAAA 25 25493963 0.763605717 8 22 199 0.921052632 1.243038049 0.131578947 0.4 0.605263158 25 2 1 35 3R:25493947-25494006 8 32 4297 FBgn0053494 1664.706667 279.3966667 423.6866667 0.019222606 0.114532505 0.075527512 1 1 1 0.01 dme-miR-8-3p 7mer-A1 AGTATTA 3R 25600961 25600967 + 3R_25600961_25600967_+ 0.823349562 0.823349562 0.823349562 0 msi FBtr0305219|FBtr0333664|FBtr0084881|FBtr0333665|FBtr0084882|FBtr0333663|FBtr0305218 25600746|25600746|25600746|25600746|25600746|25600746|25600746 25601136|25608423|25601136|25601136|25602421|25601136|25601136 3R + 25600901 25600982 5'utr msi FlyBase G45863.1 GAAGTTGGTTTTCCTTTGAGTTTGGCTAAGTTAGTAGTCCGATACACGGAAGGCAAATTAAGTATTATATTTAAGGCGCCCT 20 25600958 0.916346268 9 19 162 0.956521739 1.342422681 0.304347826 0.15 0.260869565 20 1 0 22 3R:25600901-25600982 7 msi FBtr0333663|FBtr0305218|FBtr0084882|FBtr0084881|FBtr0333665|FBtr0305219|FBtr0333664 25600746|25600746|25600746|25600746|25600746|25600746|25600746 25601136|25601136|25602421|25601136|25601136|25601136|25608423 AGTATTA 7mer-A1 dme-miR-8-3p 3R + 25600914 25600972 5'utr msi FlyBase G34587.1 CTTTGAGTTTGGCTAAGTTAGTAGTCCGATACACGGAAGGCAAATTAAGTATTATATTT 7 25600958 0.899608728 6 7 52 1 1.113943352 0.076923077 0.571428571 0.769230769 7 0 0 13 3R:25600914-25600972 7 7 4298 FBgn0011666 1019.796667 32.88 50.09666667 0.006864113 0.212895377 0.139729856 3 3 3 0.01 dme-miR-988-3p 6mer2-7 CAAGGG 3R 25601441 25601446 + 3R_25601441_25601446_+ 1 1 1 0 msi FBtr0333664|FBtr0084882 25600746|25600746 25608423|25602421 3R + 25601401 25601460 3'utr msi FlyBase G45867.1 TGGAGCCCTAAACTCAGCTGAAATGAATGAGAAACTCCTGCAAGGGCAGTATTAATTAAT 31 25601437 0.973190069 8 27 166 0.875 1.447158031 0 0.032258065 0.0625 31 4 0 28 3R:25601401-25601460 6 msi FBtr0084882|FBtr0333664 25600746|25600746 25602421|25608423 CAAGGG 6mer2-7 dme-miR-988-3p 3R + 25601412 25601469 3'utr msi FlyBase G34589.1 ACTCAGCTGAAATGAATGAGAAACTCCTGCAAGGGCAGTATTAATTAATTGAATGAAA 19 25601436 0.853622635 7 16 111 0.791666667 1.278753601 0 0.263157895 0.416666667 19 5 0 19 3R:25601412-25601469 6 23 4299 FBgn0011666 1019.796667 32.88 50.09666667 0.022553516 0.699513382 0.459112383 4 5 4.5 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 25601698 25601705 + 3R_25601698_25601705_+ 0.500120318 0.500120318 0.500120318 0 msi FBtr0333664|FBtr0084882 25600746|25600746 25608423|25602421 3R + 25601676 25601729 3'utr msi FlyBase G45869.1 CTATCTACCCAAATCTGTTATTGTACTTAATTATATAACAATTACAAATACCAC 38 25601697 0.760864444 5 38 424 1 1.681241237 0.020833333 0.184210526 0.354166667 38 0 0 48 3R:25601676-25601729 8 msi FBtr0084882|FBtr0333664 25600746|25600746 25602421|25608423 GTACTTAA 8mer-A1 dme-miR-252-5p 3R + 25601668 25601720 3'utr msi FlyBase G34590.1 CCTACCTTCTATCTACCCAAATCTGTTATTGTACTTAATTATATAACAATTAC 24 25601697 0.956187348 5 24 260 1 1.579783597 0 0.375 0.605263158 24 0 0 38 3R:25601668-25601720 8 30 4300 FBgn0011666 1019.796667 32.88 50.09666667 0.029417629 0.912408759 0.598842238 1 1 1 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 3R 25602142 25602148 + 3R_25602142_25602148_+ 0.620204266 0.620204266 0.620204266 0 msi FBtr0333664|FBtr0084882 25600746|25600746 25608423|25602421 3R + 25602020 25602158 3'utr msi FlyBase G45871.1 ATTTGCATAACCATCCAAACAGCTCATGAACCAGGTAACATAACTTTACTGTAGCTTATTGTTTTAAATGGCACAATCTTAGTTATTAATATTATTTTGTAATTACCCTTATCTGTAGCATTTGCATTTGATTTTGCAT 25 25602141 0.978324716 9 25 193 1 1.51851394 0.090909091 0.24 0.424242424 25 0 0 33 3R:25602020-25602158 7 msi FBtr0084882|FBtr0333664 25600746|25600746 25602421|25608423 TGCATTT 7mer-m8 dme-miR-277-3p 3R + 25602004 25602322 3'utr msi FlyBase G34592.2 AATCACCAAGTCTTTCATTTGCATAACCATCCAAACAGCTCATGAACCAGGTAACATAACTTTACTGTAGCTTATTGTTTTAAATGGCACAATCTTAGTTATTAATATTATTTTGTAATTACCCTTATCTGTAGCATTTGCATTTGATTTTGCATTCGGCAAATACTTCACCCATTGAAACCAAGAAAATTATCGAATTAAGAAGAAACCCGGGGCAGATGCTCCTGGATAGTTATGTATTTGTCTCATTTGAATCGCTTGCATGCTTGAAGTTTAATTTTAGTTACTAGTTATCATTTGGAAAGTAATATTTTGCGTA 51 25602141 0.987592397 30 49 438 0.962962963 1.892094603 0.148148148 0.38 0.617283951 50 3 0 78 3R:25602004-25602322 7 10 4301 FBgn0011666 1019.796667 32.88 50.09666667 0.009805876 0.304136253 0.199614079 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 3R 25602762 25602769 + 3R_25602762_25602769_+ 0.64356572 0.64356572 0.64356572 0 msi FBtr0333664 25600746 25608423 3R + 25602742 25602788 3'utr msi FlyBase G45874.1 AATGTAATATTGTTTCGTATACCAAAGATAACGCATATTAACCCAAA 71 25602761 0.877322409 4 64 465 0.913043478 1.924279286 0.163043478 0.197183099 0.380434783 71 8 0 84 3R:25602742-25602788 8 msi FBtr0333664 25600746 25608423 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 25602721 25602784 3'utr msi FlyBase G34593.1 TTCGACTCGGGGGGTGAGTATAATGTAATATTGTTTCGTATACCAAAGATAACGCATATTAACC 54 25602761 0.977073429 4 51 335 0.933333333 1.84509804 0.173333333 0.277777778 0.48 54 5 0 70 3R:25602721-25602784 8 61.5 4302 FBgn0011666 1019.796667 32.88 50.09666667 0.060306139 1.870437956 1.227626589 1 1 1 0.01 dme-miR-283-5p 6mer3-8 TGATAT 3R 25604378 25604383 + 3R_25604378_25604383_+ 0.999999919 1 0.99999996 7.07E-08 msi FBtr0333664 25600746 25608423 3R + 25604344 25604397 3'utr msi FlyBase G45877.1 GATAGAACATATACGATGATATTTAGCAAGACCGTGATATATTCAATTAGTAAA 12 25604384 0.980677403 7 11 76 0.923076923 0.77815125 0.230769231 0.083333333 0.153846154 12 0 1 12 3R:25604344-25604397 6 msi FBtr0333664 25600746 25608423 TGATAT 6mer3-8 dme-miR-283-5p 3R + 25604362 25604396 3'utr msi FlyBase G34596.1 ATATTTAGCAAGACCGTGATATATTCAATTAGTAA 7 25604384 0.824798869 4 7 48 1 1.079181246 0 0.571428571 0.75 7 0 0 12 3R:25604362-25604396 6 8 4303 FBgn0011666 1019.796667 32.88 50.09666667 0.007844701 0.243309002 0.159691264 -6 -6 -6 0.01 dme-miR-995-5p 6mer3-8 AATTCG 3R 25653264 25653269 - 3R_25653264_25653269_- 0.999999831 0.999999505 0.999999668 2.12E-07 Tnks FBtr0330383|FBtr0084890 25653089|25653089 25653514|25654531 3R - 25653267 25653295 3'utr Tnks FlyBase G54732.1 GTGAAGCACAGTTTTTGAGTGATTTTAAT 9 25653281 0.588780865 4 9 84 1 1.041392685 0.181818182 0.222222222 0.363636364 9 0 0 11 3R:25653267-25653295 2 Tnks FBtr0330383|FBtr0084890 25653089|25653089 25653514|25654531 AATTCG 6mer3-8 dme-miR-995-5p 3R - 25653268 25653299 3'utr Tnks FlyBase G41317.1 AAAAGTGAAGCACAGTTTTTGAGTGATTTTAA 5 25653280 0.986498043 3 5 45 1 0.903089987 0 0.4 0.625 5 0 0 8 3R:25653268-25653299 1 3 4304 FBgn0027508 387.6333333 8.48 12.93666667 0.007739273 0.353773585 0.231898995 12 11 11.5 0.01 dme-bantam-3p 7mer-m8 TGATCTC 3R 25653482 25653488 - 3R_25653482_25653488_- 0.661615243 0.661615243 0.661615243 0 Tnks FBtr0330383|FBtr0084890 25653089|25653089 25653514|25654531 3R - 25653430 25653522 stop_codon Tnks FlyBase G54733.1 AGTTGTGACGGTGGTACGACATGCTGGTGGTTATTGATCTCTATGTCTCCGTTGGCCTCCCGTCTATTTTATTACAATTACTAGCTATAGATG 352 25653489 0.713909296 21 327 3618 0.926108374 2.274157849 0.201970443 0.136363636 0.251231527 352 29 1 376 3R:25653430-25653522 7 Tnks FBtr0330383|FBtr0084890 25653089|25653089 25653514|25654531 TGATCTC 7mer-m8 dme-bantam-3p 3R - 25653448 25653518 stop_codon Tnks FlyBase G41319.1 GTGACGGTGGTACGACATGCTGGTGGTTATTGATCTCTATGTCTCCGTTGGCCTCCCGTCTATTTTATTAC 233 25653489 0.663587543 15 213 2298 0.933884298 1.928139707 0.201101928 0.407725322 0.619834711 233 21 3 339 3R:25653448-25653518 7 262.5 4305 FBgn0027508 387.6333333 8.48 12.93666667 0.677186344 30.95518868 20.29116207 1 1 1 0.01 dme-miR-190-5p 8mer-m1 ACATATCT 3R 25664733 25664740 + 3R_25664733_25664740_+ 0.577627638 0.577627638 0.577627638 0 RASSF8 FBtr0084898 25664654 25665640 3R + 25664713 25664746 3'utr RASSF8 FlyBase G45890.1 TTTTGGGAACAAATTGATCAACATATCTTGAATG 21 25664726 0.838968553 3 16 94 0.9 1.130333768 0.033333333 0.333333333 0.533333333 21 2 1 27 3R:25664713-25664746 8 RASSF8 FBtr0084898 25664654 25665640 ACATATCT 8mer-m1 dme-miR-190-5p 3R + 25664710 25664777 3'utr RASSF8 FlyBase G34607.1 TGTTTTTGGGAACAAATTGATCAACATATCTTGAATGCATAATGGAGTTGAAACGAAATGGATTCCTT 10 25664726 0.805871827 4 9 56 1 1.079181246 0.25 0.2 0.333333333 10 0 0 12 3R:25664710-25664777 8 12 4306 FBgn0261986 768.6366667 27.28 42.04333333 0.015612058 0.439882698 0.285419805 7 7 7 0.01 dme-bantam-3p 6mer2-7 GATCTC 3R 25664877 25664882 + 3R_25664877_25664882_+ 1 1 1 0 RASSF8 FBtr0084898 25664654 25665640 3R + 25664850 25664976 3'utr RASSF8 FlyBase G45891.1 ATGTTTACATTCCAATCACACTCTATGGATCTCTCAATGCAATGATATATGTTACAAATTTGAAATCACAATCGTTTTATTACTCTACATTCCGCACTGTACTTTGTATTTAATAGTAGTTAATGAG 460 25664873 0.731628957 19 451 3253 0.981718464 2.42894429 0.219378428 0.169565217 0.301645338 460 9 1 537 3R:25664850-25664976 6 RASSF8 FBtr0084898 25664654 25665640 GATCTC 6mer2-7 dme-bantam-3p 3R + 25664855 25664912 3'utr RASSF8 FlyBase G34608.1 TACATTCCAATCACACTCTATGGATCTCTCAATGCAATGATATATGTTACAAATTTGA 266 25664873 0.733875348 8 259 1826 0.9825 2.117271296 0.1825 0.383458647 0.59 266 5 2 393 3R:25664855-25664912 6 347 4307 FBgn0261986 768.6366667 27.28 42.04333333 0.451448669 12.71994135 8.25338936 4 4 4 0.01 dme-miR-999-3p 7mer-A1 GTTAACA 3R 25665049 25665055 + 3R_25665049_25665055_+ 0.820903595 0.823349555 0.822126575 0.001729583 RASSF8 FBtr0084898 25664654 25665640 3R + 25665019 25665099 3'utr RASSF8 FlyBase G45892.1 TTTTGGTTAATTTTTGCTGCTAGTCTACGTGTTAACAAAAACCCTTTCCAATCTCTACAATTCGCCATTAGTTGTTAACTT 17 25665045 0.801081133 8 15 144 1 1.301029996 0.15 0.117647059 0.25 17 0 0 20 3R:25665019-25665099 7 RASSF8 FBtr0084898 25664654 25665640 GTTAACA 7mer-A1 dme-miR-999-3p 3R + 25665023 25665091 3'utr RASSF8 FlyBase G34610.1 GGTTAATTTTTGCTGCTAGTCTACGTGTTAACAAAAACCCTTTCCAATCTCTACAATTCGCCATTAGTT 12 25665045 0.987714066 7 10 92 0.894736842 1.230448921 0.052631579 0.5 0.684210526 12 2 0 17 3R:25665023-25665091 7 7 4308 FBgn0261986 768.6366667 27.28 42.04333333 0.009107034 0.25659824 0.166494886 4 4 4 0.01 dme-miR-252-5p 8mer-m1 GTACTTAG 3R 25665245 25665252 + 3R_25665245_25665252_+ 0.636789085 0.636789085 0.636789085 0 RASSF8 FBtr0084898 25664654 25665640 3R + 25665211 25665295 3'utr RASSF8 FlyBase G45893.1 TAGAATTCACAATTCGAATTACACAAAACTTATTGTACTTAGCAATTAGCGCAGCTTTAAAAAAACAAATTAGCAATGCTTTGTT 13 25665244 0.971758721 7 13 78 1 1.204119983 0.0625 0.153846154 0.3125 13 0 0 16 3R:25665211-25665295 8 RASSF8 FBtr0084898 25664654 25665640 GTACTTAG 8mer-m1 dme-miR-252-5p 3R + 25665233 25665275 3'utr RASSF8 FlyBase G34611.1 ACAAAACTTATTGTACTTAGCAATTAGCGCAGCTTTAAAAAAA 7 25665243 0.761161954 4 7 41 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 3R:25665233-25665275 8 7.5 4309 FBgn0261986 768.6366667 27.28 42.04333333 0.009757536 0.274926686 0.178387378 1 2 1.5 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 25665488 25665493 + 3R_25665488_25665493_+ 0.999999903 0.999999999 0.999999951 7.07E-08 RASSF8 FBtr0084898 25664654 25665640 3R + 25665466 25665538 3'utr RASSF8 FlyBase G45894.1 ATTTAATATTTACACAAACTGATGATGATAGTGAACTACAAAACACCAACGGAAATGCAATTTATCGAATATT 36 25665486 0.827785411 10 34 174 0.951219512 1.591064607 0.073170732 0.138888889 0.243902439 36 2 0 39 3R:25665466-25665538 6 RASSF8 FBtr0084898 25664654 25665640 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R + 25665466 25665541 3'utr RASSF8 FlyBase G34612.1 ATTTAATATTTACACAAACTGATGATGATAGTGAACTACAAAACACCAACGGAAATGCAATTTATCGAATATTATA 34 25665488 0.91705824 8 32 165 0.957446809 1.653212514 0.170212766 0.294117647 0.489361702 34 2 0 45 3R:25665466-25665541 6 21.5 4310 FBgn0261986 768.6366667 27.28 42.04333333 0.027971603 0.788123167 0.511377151 2 0 1 0.01 dme-miR-92b-3p 7mer-m1 TGCAATT 3R 25665521 25665527 + 3R_25665521_25665527_+ 0.765586663 0.765586663 0.765586663 0 RASSF8 FBtr0084898 25664654 25665640 3R + 25665466 25665538 3'utr RASSF8 FlyBase G45894.1 ATTTAATATTTACACAAACTGATGATGATAGTGAACTACAAAACACCAACGGAAATGCAATTTATCGAATATT 36 25665524 0.827785411 10 34 174 0.951219512 1.591064607 0.073170732 0.138888889 0.243902439 36 2 0 39 3R:25665466-25665538 7 RASSF8 FBtr0084898 25664654 25665640 TGCAATT 7mer-m1 dme-miR-92b-3p 3R + 25665466 25665541 3'utr RASSF8 FlyBase G34612.1 ATTTAATATTTACACAAACTGATGATGATAGTGAACTACAAAACACCAACGGAAATGCAATTTATCGAATATTATA 34 25665491 0.91705824 8 32 165 0.957446809 1.653212514 0.170212766 0.294117647 0.489361702 34 2 0 45 3R:25665466-25665541 7 13 4311 FBgn0261986 768.6366667 27.28 42.04333333 0.016913063 0.476539589 0.309204789 -3 30 13.5 0.01 dme-miR-7-5p 6mer3-8 GTCTTC 3R 25679281 25679286 + 3R_25679281_25679286_+ 1 1 1 0 CG5039 FBtr0084900 25679239 25679529 3R + 25679224 25679335 stop_codon CG5039 FlyBase G45896.1 ACGCCTCCAATGCCTAGTGAATCTCAAAAGTCTTCCATACACTTTATTGTCCACGTTGTCTTCAAACGGTGGTTGTCATCGGTTTAGTTACTACTGCAAACTACGTGCCTCT 45 25679279 0.983528738 8 42 330 0.962962963 1.414973348 0.203703704 0.2 0.333333333 45 1 1 52 3R:25679224-25679335 6 CG5039 FBtr0084900 25679239 25679529 GTCTTC 6mer3-8 dme-miR-7-5p 3R + 25679223 25679323 stop_codon CG5039 FlyBase G34614.1 AACGCCTCCAATGCCTAGTGAATCTCAAAAGTCTTCCATACACTTTATTGTCCACGTTGTCTTCAAACGGTGGTTGTCATCGGTTTAGTTACTACTGCAAA 31 25679279 0.824513547 7 30 244 0.977272727 1.633468456 0.318181818 0.322580645 0.522727273 31 1 0 43 3R:25679223-25679323 6 18 4312 FBgn0039356 51.46666667 9.296666667 14.23333333 0.349740933 1.936177842 1.264637002 2 2 2 0.01 dme-miR-318-3p 7mer-m8 CCCAGTG 3R 25679436 25679442 + 3R_25679436_25679442_+ 0.70594925 0.705949882 0.705949566 4.24E-07 CG5039 FBtr0084900 25679239 25679529 3R + 25679392 25679463 3'utr CG5039 FlyBase G45897.1 GGATTCGCGTCGTCAGGTCGTAGAAGCCAAAGAAGAATGCACCGCCCAGTGTGATCCACAGCACACGCGGCA 15 25679429 0.941123751 4 12 36 0.8125 0.812913357 0.375 0.066666667 0.125 15 2 1 13 3R:25679392-25679463 7 CG5039 FBtr0084900 25679239 25679529 CCCAGTG 7mer-m8 dme-miR-318-3p 3R + 25679357 25679447 3'utr CG5039 FlyBase G34615.1 ACCCTAATTTTAATGATCCGTACTGGTGGCGCCAAGGATTCGCGTCGTCAGGTCGTAGAAGCCAAAGAAGAATGCACCGCCCAGTGTGATC 14 25679429 0.922812038 6 14 40 1 1.301029996 0.6 0.285714286 0.5 14 0 0 20 3R:25679357-25679447 7 8 4313 FBgn0039356 51.46666667 9.296666667 14.23333333 0.155440415 0.860523485 0.56206089 7 7 7 0.01 dme-miR-317-3p 8mer-A1 TGTGTTCA 3R 25683350 25683357 + 3R_25683350_25683357_+ 0.631136783 0.631136783 0.631136783 0 CG5028 FBtr0113289 25683087 25683780 3R + 25683310 25683381 3'utr CG5028 FlyBase G45907.2 AACCCAAACAAAATATGTTACCCCGGCTAAATGTCCATTGTGTGTTCATTCGATGTCCAAGTGTGATAATTC 12 25683348 0.916947305 9 11 80 0.866666667 1.113943352 0.2 0.166666667 0.333333333 12 2 0 13 3R:25683310-25683381 8 CG5028 FBtr0113289 25683087 25683780 TGTGTTCA 8mer-A1 dme-miR-317-3p 3R + 25683332 25683383 3'utr CG5028 FlyBase G34623.1 CCGGCTAAATGTCCATTGTGTGTTCATTCGATGTCCAAGTGTGATAATTCAG 8 25683348 0.778352957 5 8 69 1 1 0.5 0.25 0.4 8 0 0 10 3R:25683332-25683383 8 6 4314 FBgn0039358 738.9366667 46.93 71.87666667 0.008119776 0.127849989 0.083476325 2 2 2 0.01 dme-miR-184-5p 6mer3-8 TGATAA 3R 25684016 25684021 - 3R_25684016_25684021_- 1 1 1 0 RpL27 FBtr0331362 25683621 25684094 3R - 25683976 25684078 NoAnnotation G54747.1 TTGTGGTTACTGGATTTGTCGCTCTTTTTTAAGGTTTAATAAACAAAGAAGTAATTCTGATAAAACTGACCGAAGTGGATCCTGTGCCTTCTTATTAAGTGTG 47 25684021 0.973029356 18 43 345 0.981818182 1.73239376 0.127272727 0.14893617 0.272727273 47 1 0 54 3R:25683976-25684078 6 RpL27 FBtr0331362 25683621 25684094 TGATAA 6mer3-8 dme-miR-184-5p 3R - 25683987 25684168 stop_codon RpL27 FlyBase G41330.1 AGACCCGCGTCAAGTTCGAGTCCGTCTACAAGGAGGGCAAGAACAAGTGGTTCTTCCAGAAGCTGCGTTTCTAAGCTGCCCATTCGCTACTTGTGGTTACTGGATTTGTCGCTCTTTTTTAAGGTTTAATAAACAAAGAAGTAATTCTGATAAAACTGACCGAAGTGGATCCTGTGCCTTCT 55 25684040 0.956468531 23 47 414 0.853658537 1.06694679 0.097560976 0.4 0.597560976 55 7 5 70 3R:25683987-25684168 6 10 4315 FBgn0039359 9552.62 2097.91 3191.89 0.001046833 0.004766649 0.00313294 0 19 9.5 0.01 dme-miR-968-5p 6mer2-7 CTACTT 3R 25684077 25684082 - 3R_25684077_25684082_- 0.928994708 0.930201663 0.929598185 0.000853478 RpL27 FBtr0331362 25683621 25684094 3R - 25683976 25684078 NoAnnotation G54747.1 TTGTGGTTACTGGATTTGTCGCTCTTTTTTAAGGTTTAATAAACAAAGAAGTAATTCTGATAAAACTGACCGAAGTGGATCCTGTGCCTTCTTATTAAGTGTG 47 25684077 0.973029356 18 43 345 0.981818182 1.73239376 0.127272727 0.14893617 0.272727273 47 1 0 54 3R:25683976-25684078 2 RpL27 FBtr0331362 25683621 25684094 CTACTT 6mer2-7 dme-miR-968-5p 3R - 25683987 25684168 stop_codon RpL27 FlyBase G41330.1 AGACCCGCGTCAAGTTCGAGTCCGTCTACAAGGAGGGCAAGAACAAGTGGTTCTTCCAGAAGCTGCGTTTCTAAGCTGCCCATTCGCTACTTGTGGTTACTGGATTTGTCGCTCTTTTTTAAGGTTTAATAAACAAAGAAGTAATTCTGATAAAACTGACCGAAGTGGATCCTGTGCCTTCT 55 25684077 0.956468531 23 47 414 0.853658537 1.06694679 0.097560976 0.4 0.597560976 55 7 5 70 3R:25683987-25684168 6 25 4316 FBgn0039359 9552.62 2097.91 3191.89 0.002617083 0.011916622 0.00783235 -5 -5 -5 0.01 dme-miR-965-3p 6mer3-8 TACGCT 3R 25698733 25698738 - 3R_25698733_25698738_- 1 1 1 0 LpR2 FBtr0113387|FBtr0113385|FBtr0113384 25698725|25698725|25698725 25699984|25699984|25699984 3R - 25698702 25698789 3'utr LpR2 FlyBase G54760.1 AAATATTAGCTAACTATAAATGGTATGTGTGAAAATTTGAATAAAGCAGTTTACGCTAGTAACAAAAAAGAATTATATAGAATATTTT 46 25698764 0.985973956 10 43 358 0.941176471 1.681241237 0.078431373 0.108695652 0.196078431 46 3 0 48 3R:25698702-25698789 6 LpR2 FBtr0113387|FBtr0113385|FBtr0113384 25698725|25698725|25698725 25699984|25699984|25699984 TACGCT 6mer3-8 dme-miR-965-3p 3R - 25698707 25698780 3'utr LpR2 FlyBase G41344.1 CTAACTATAAATGGTATGTGTGAAAATTTGAATAAAGCAGTTTACGCTAGTAACAAAAAAGAATTATATAGAAT 32 25698764 0.97919618 7 32 219 1 1.662757832 0.239130435 0.34375 0.543478261 32 0 0 46 3R:25698707-25698780 6 13.5 4317 FBgn0051092 94.66666667 3.816666667 5.916666667 0.142605634 3.537117904 2.281690141 26 26 26 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT 3R 25698848 25698853 - 3R_25698848_25698853_- 1 1 1 0 LpR2 FBtr0113387|FBtr0113385|FBtr0113384 25698725|25698725|25698725 25699984|25699984|25699984 3R - 25698791 25698874 3'utr LpR2 FlyBase G54761.1 AATGTGTATTGGCAATTTTTGGTTCCTGTAAAATGTATTTTAATTTAAGCATGAAAAGTATTTGCTTTAATGCTTTTTTGAAAC 55 25698855 0.993485907 10 50 625 0.898305085 1.423245874 0.152542373 0.072727273 0.13559322 55 5 1 53 3R:25698791-25698874 6 LpR2 FBtr0113387|FBtr0113385|FBtr0113384 25698725|25698725|25698725 25699984|25699984|25699984 GTTCCT 6mer2-7 dme-miR-276a-3p 3R - 25698801 25698874 3'utr LpR2 FlyBase G41345.1 AATGTGTATTGGCAATTTTTGGTTCCTGTAAAATGTATTTTAATTTAAGCATGAAAAGTATTTGCTTTAATGCT 47 25698855 0.991830186 7 46 513 0.985294118 1.826074803 0.102941176 0.382978723 0.573529412 47 1 0 67 3R:25698801-25698874 6 48.5 4318 FBgn0051092 94.66666667 3.816666667 5.916666667 0.512323944 12.70742358 8.197183099 2 2 2 0.01 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 25699011 25699017 - 3R_25699011_25699017_- 0.823349562 0.823349562 0.823349562 0 LpR2 FBtr0113387|FBtr0113385|FBtr0113384 25698725|25698725|25698725 25699984|25699984|25699984 3R - 25698949 25699045 3'utr LpR2 FlyBase G54762.1 TTTCTTTCTTGGGTATTCAAAACAATTTGCTGTGATCAGTTTAAAAGCATTAGACCTGCATTAAATCATCTTATTCGTAGTGATTTTACTATTCTTC 537 25699019 0.773574578 19 522 4419 0.969984202 1.788168371 0.120063191 0.143389199 0.273301738 537 10 9 614 3R:25698949-25699045 7 LpR2 FBtr0113387|FBtr0113385|FBtr0113384 25698725|25698725|25698725 25699984|25699984|25699984 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R - 25698908 25699044 3'utr LpR2 FlyBase G41346.1 TTCTTTCTTGGGTATTCAAAACAATTTGCTGTGATCAGTTTAAAAGCATTAGACCTGCATTAAATCATCTTATTCGTAGTGATTTTACTATTCTTCATTTATTTAGTGTATAAACAAGCTTTCAATCATTTTAACTT 355 25699019 0.764855459 19 343 2872 0.970260223 1.939519253 0.128252788 0.397183099 0.602230483 355 11 5 522 3R:25698908-25699044 7 425 4319 FBgn0051092 94.66666667 3.816666667 5.916666667 4.48943662 111.3537118 71.83098592 2 2 2 0.01 dme-miR-277-3p 6mer2-7 GCATTT 3R 25853811 25853816 + 3R_25853811_25853816_+ 1 1 1 0 CG5886 FBtr0084907 25853743 25853989 3R + 25853796 25853844 3'utr CG5886 FlyBase G45911.1 AGCCTTCCCTGCAAAGCATTTTGTGTCATCCATGTCTCAACTGAAAAAC 9 25853816 0.836618741 7 9 78 1 0.954242509 0.222222222 0 0 9 0 0 9 3R:25853796-25853844 6 CG5886 FBtr0084907 25853743 25853989 GCATTT 6mer2-7 dme-miR-277-3p 3R + 25853781 25853838 3'utr CG5886 FlyBase G34626.1 CTCGGGCGGCCACCAAGCCTTCCCTGCAAAGCATTTTGTGTCATCCATGTCTCAACTG 7 25853816 0.981105696 5 7 53 1 1.146128036 0.5 0.571428571 0.785714286 7 0 0 14 3R:25853781-25853838 6 7 4320 FBgn0039379 737.67 47.67 73.31 0.009489338 0.146842878 0.095484927 -5 -5 -5 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3R 25874463 25874468 - 3R_25874463_25874468_- 1 1 1 0 Tsp96F FBtr0084912|FBtr0330164|FBtr0330163 25873532|25872898|25873532 25875089|25875089|25875041 3R - 25874451 25874482 3'utr Tsp96F FlyBase G54792.1 TTGTTTCCTCCCATAAGACTTTTGAATCGATT 15 25874461 0.717564612 3 15 120 1 1.278753601 0.052631579 0.266666667 0.421052632 15 0 0 19 3R:25874451-25874482 6 Tsp96F FBtr0330163|FBtr0084912|FBtr0330164 25873532|25873532|25872898 25875041|25875089|25875089 AAGACT 6mer3-8 dme-miR-14-3p 3R - 25874442 25874480 3'utr Tsp96F FlyBase G41361.1 GTTTCCTCCCATAAGACTTTTGAATCGATTACTTTTTTT 14 25874461 0.981920019 4 14 109 1 1.361727836 0.217391304 0.357142857 0.608695652 14 0 0 23 3R:25874442-25874480 6 14.5 4321 FBgn0027865 972.28 39.09 59.75 0.014913399 0.370938859 0.242677824 -7 -7 -7 0.01 dme-miR-184-3p 7mer-m8 TCCGTCC 3R 25887949 25887955 + 3R_25887949_25887955_+ 0.661615243 0.661615243 0.661615243 0 SppL FBtr0084911|FBtr0344118|FBtr0084909|FBtr0300820|FBtr0300819 25887365|25887365|25887365|25887365|25887365 25888071|25888071|25888230|25888071|25888230 3R + 25887916 25888043 3'utr SppL FlyBase G45924.1 AATCGAGATCCGTTTCCGTTTCACACGCTCATTTCCGTCCTTCGATTTTTTCGTTTTGTCACCCAATGTTTCCCACACATCTTCACAACCATAATGATGTTTTGCCAAAATGCATGTGTTCGTTGCAA 618 25887948 0.984084791 15 613 5045 0.990691489 2.872156273 0.167553191 0.165048544 0.313829787 618 7 0 745 3R:25887916-25888043 7 SppL FBtr0084909|FBtr0300820|FBtr0300819|FBtr0084911|FBtr0344118 25887365|25887365|25887365|25887365|25887365 25888230|25888071|25888230|25888071|25888071 TCCGTCC 7mer-m8 dme-miR-184-3p 3R + 25887922 25887976 3'utr SppL FlyBase G34634.1 GATCCGTTTCCGTTTCACACGCTCATTTCCGTCCTTCGATTTTTTCGTTTTGTCA 396 25887948 0.725859129 8 386 3013 0.977309562 2.002166062 0.141004862 0.396464646 0.612641815 396 9 5 603 3R:25887922-25887976 7 501 4322 FBgn0039381 696.8266667 34.86 53.62333333 0.718973633 14.37177281 9.342947722 1 1 1 0.01 dme-miR-305-3p 7mer-A1 TGTGCCA 3R 25892860 25892866 + 3R_25892860_25892866_+ 0.782849016 0.775513744 0.77918138 0.00518684 Lnk FBtr0339160|FBtr0339162|FBtr0084937|FBtr0339161|FBtr0084935|FBtr0084936 25892801|25892042|25892801|25892042|25892801|25892801 25893270|25893270|25893270|25893270|25893270|25893270 3R + 25892826 25892871 3'utr Lnk FlyBase G45937.1 GCATTTCGCGGCTTAACCAGCGGAACTTTACTTTTGTGCCATTTTA 9 25892860 0.982325781 4 8 90 0.888888889 0.903089987 0 0 0 9 1 0 8 3R:25892826-25892871 7 Lnk FBtr0084935|FBtr0084936|FBtr0084937|FBtr0339161|FBtr0339160|FBtr0339162 25892801|25892801|25892801|25892042|25892801|25892042 25893270|25893270|25893270|25893270|25893270|25893270 TGTGCCA 7mer-A1 dme-miR-305-3p 3R + 25892825 25892886 3'utr Lnk FlyBase G34642.1 TGCATTTCGCGGCTTAACCAGCGGAACTTTACTTTTGTGCCATTTTAATCATTGTCCTAAAG 8 25892860 0.993731794 4 5 65 0.8 1.079181246 0.066666667 0.5 0.733333333 8 3 0 12 3R:25892825-25892886 7 6 4323 FBgn0028717 647.6666667 24.78 37.87333333 0.009264025 0.242130751 0.158422813 0 0 0 0.01 dme-miR-317-3p 8mer-A1 TGTGTTCA 3R 25893028 25893035 + 3R_25893028_25893035_+ 0.631136783 0.631136783 0.631136783 0 Lnk FBtr0339160|FBtr0339162|FBtr0084937|FBtr0339161|FBtr0084935|FBtr0084936 25892801|25892042|25892801|25892042|25892801|25892801 25893270|25893270|25893270|25893270|25893270|25893270 3R + 25892917 25893043 3'utr Lnk FlyBase G45937.3 ATGTGCGTTCTTTGCTTTCTTGATTCACTTGTTTCTATTTTAGTTAGTACCTCTTTTGGAAGACATGAAGTAACTGAACATTATTATGTATACATTATATAGCTAAATGTGTGTGTTCATTTTAAGT 25 25893030 0.770772092 15 24 224 0.964285714 1.431363764 0.142857143 0.12 0.214285714 25 1 0 27 3R:25892917-25893043 8 Lnk FBtr0084935|FBtr0084936|FBtr0084937|FBtr0339161|FBtr0339160|FBtr0339162 25892801|25892801|25892801|25892042|25892801|25892042 25893270|25893270|25893270|25893270|25893270|25893270 TGTGTTCA 8mer-A1 dme-miR-317-3p 3R + 25893009 25893034 3'utr Lnk FlyBase G34644.1 CATTATATAGCTAAATGTGTGTGTTC 9 25893030 0.735286682 2 9 73 1 1.204119983 0.0625 0.444444444 0.6875 9 0 0 16 3R:25893009-25893034 7 9.5 4324 FBgn0028717 647.6666667 24.78 37.87333333 0.014668039 0.383373688 0.25083612 -2 -2 -2 0.01 dme-miR-968-5p 6mer3-8 ACTACT 3R 25894983 25894988 + 3R_25894983_25894988_+ 1 1 1 0 CG5913 FBtr0084938 25894933 25895026 3R + 25894950 25894991 3'utr CG5913 FlyBase G45945.1 AATGTAGACCATAAACGACTGATCCTCTTGTAAACTACTAAC 54 25894961 0.812882482 8 48 285 0.916666667 1.138302698 0.1 0.111111111 0.2 54 2 3 55 3R:25894950-25894991 6 CG5913 FBtr0084938 25894933 25895026 ACTACT 6mer3-8 dme-miR-968-5p 3R + 25894942 25894992 3'utr CG5913 FlyBase G34651.1 TTCCCAAAAATGTAGACCATAAACGACTGATCCTCTTGTAAACTACTAACA 48 25894961 0.78499005 8 46 285 0.955223881 1.806179974 0.119402985 0.291666667 0.492537313 48 3 0 64 3R:25894942-25894992 6 11.5 4325 FBgn0039385 97.66666667 7.92 12.23 0.11774744 1.452020202 0.940310711 22 22 22 0.01 dme-miR-7-5p 8mer-A1 GTCTTCCA 3R 26022783 26022790 + 3R_26022783_26022790_+ 0.675381664 0.675381664 0.675381664 0 E(spl)m3-HLH FBtr0084958 26022693 26023127 3R + 26022749 26022794 3'utr E(spl)m3-HLH FlyBase G45962.1 AATGGCTATTGACCGTTCTGCAACAAGATCCGTTGTCTTCCAAAGT 8 26022782 0.976566965 5 8 54 1 0.954242509 0.333333333 0.125 0.222222222 8 0 0 9 3R:26022749-26022794 8 E(spl)m3-HLH FBtr0084958 26022693 26023127 GTCTTCCA 8mer-A1 dme-miR-7-5p 3R + 26022762 26022796 3'utr E(spl)m3-HLH FlyBase G34665.1 CGTTCTGCAACAAGATCCGTTGTCTTCCAAAGTAA 5 26022783 0.614741982 3 5 34 1 0.84509804 0.571428571 0.2 0.428571429 5 0 0 7 3R:26022762-26022796 8 6 4326 FBgn0002609 41.66666667 4.113333333 6.463333333 0.144 1.458670989 0.928313564 1 0 0.5 0.01 dme-miR-980-3p 7mer-A1 GCAGCTA 3R 26049609 26049615 + 3R_26049609_26049615_+ 0.823349562 0.823349562 0.823349562 0 gro FBtr0337057|FBtr0305047|FBtr0339900 26048604|26048604|26048604 26049911|26049911|26049911 3R + 26049587 26049625 3'utr gro FlyBase G45976.1 AGTGTAAAATCCTATATTTTGAGCAGCTAAACCCAACAC 15 26049606 0.718880605 4 15 87 1 1.204119983 0 0.066666667 0.125 15 0 0 16 3R:26049587-26049625 7 gro FBtr0337057|FBtr0339900|FBtr0305047 26048604|26048604|26048604 26049911|26049911|26049911 GCAGCTA 7mer-A1 dme-miR-980-3p 3R + 26049593 26049626 3'utr gro FlyBase G34681.1 AAATCCTATATTTTGAGCAGCTAAACCCAACACA 6 26049606 0.944704627 2 6 32 1 0.954242509 0 0.5 0.666666667 6 0 0 9 3R:26049593-26049626 7 10.5 4327 FBgn0001139 2815.8 93.08 143.0433333 0.003728958 0.112806188 0.07340433 3 3 3 0.01 dme-miR-965-3p 7mer-m8 TACGCTT 3R 26054491 26054497 - 3R_26054491_26054497_- 0.620204855 0.620204855 0.620204855 0 Dak1 FBtr0084976 26054235 26054574 3R - 26054476 26054616 stop_codon Dak1 FlyBase G54802.1 TTCGGGGAGGTGGAAAAGATATTTGTGGCCAGCGGCTTCTAGATTTCCTGTTCATATTCCGGTTATGTGTGTAGTGCTATCCTTACCTTTCATTTGTACCCTCTAAAAAAATACATATATACGCTTGTTAATAGTAATGCA 57 26054489 0.891698128 20 54 469 0.957142857 1.525044807 0.1 0.210526316 0.357142857 57 2 1 67 3R:26054476-26054616 7 Dak1 FBtr0084976 26054235 26054574 TACGCTT 7mer-m8 dme-miR-965-3p 3R - 26054477 26054552 3'utr Dak1 FlyBase G41368.1 ATGTGTGTAGTGCTATCCTTACCTTTCATTTGTACCCTCTAAAAAAATACATATATACGCTTGTTAATAGTAATGC 38 26054488 0.674912521 14 34 332 0.933333333 1.447158031 0.15 0.394736842 0.616666667 38 3 1 56 3R:26054477-26054552 7 22 4328 FBgn0028833 760.9966667 77.71 118.7166667 0.028909456 0.283103848 0.185315176 -8 -9 -8.5 0.01 dme-miR-995-5p 6mer3-8 AATTCG 3R 26130120 26130125 + 3R_26130120_26130125_+ 1 1 1 0 CG31324 FBtr0333926|FBtr0084985|FBtr0333925 26129613|26129613|26129613 26130190|26130190|26130674 3R + 26130095 26130137 3'utr CG31324 FlyBase G45992.1 AATTTCAATGGGCTTCGTTTTGAAAAATTCGTACTGATTAAAT 12 26130122 0.820914757 5 12 121 1 1.079181246 0 0 0 12 0 0 12 3R:26130095-26130137 6 CG31324 FBtr0333925|FBtr0084985|FBtr0333926 26129613|26129613|26129613 26130674|26130190|26130190 AATTCG 6mer3-8 dme-miR-995-5p 3R + 26130094 26130137 3'utr CG31324 FlyBase G34697.1 AAATTTCAATGGGCTTCGTTTTGAAAAATTCGTACTGATTAAAT 18 26130123 0.789672609 5 16 180 0.923076923 1.079181246 0 0.277777778 0.5 18 1 1 24 3R:26130094-26130137 6 13.5 4329 FBgn0051324 1208.083333 49.80333333 76.73666667 0.011174726 0.271066194 0.175926328 -2 -3 -2.5 0.01 dme-miR-965-3p 7mer-m8 TACGCTT 3R 26130354 26130360 + 3R_26130354_26130360_+ 0.620204855 0.620204855 0.620204855 0 CG31324 FBtr0333925 26129613 26130674 3R + 26130332 26130374 3'utr CG31324 FlyBase G45994.1 AGCATAATCAATGGAACCCTACTACGCTTTTCGCTTTATACAA 89 26130361 0.607114703 5 86 598 0.973684211 1.744292983 0.219298246 0.247191011 0.412280702 89 2 1 111 3R:26130332-26130374 7 CG31324 FBtr0333925 26129613 26130674 TACGCTT 7mer-m8 dme-miR-965-3p 3R + 26130332 26130374 3'utr CG31324 FlyBase G34699.1 AGCATAATCAATGGAACCCTACTACGCTTTTCGCTTTATACAA 72 26130361 0.615389224 4 70 490 0.963302752 2.021189299 0.174311927 0.402777778 0.605504587 72 4 0 105 3R:26130332-26130374 7 79.5 4330 FBgn0051324 1208.083333 49.80333333 76.73666667 0.065806719 1.596278696 1.036010599 -7 -7 -7 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3R 26184875 26184881 + 3R_26184875_26184881_+ 0.443131017 0.443131018 0.443131017 0 CG31323 FBtr0084988|FBtr0307339 26184611|26184611 26187307|26184974 3R + 26184854 26184905 3'utr CG31323 FlyBase G45999.1 ATGGAATTCATCAAGCAATTATGTGATTTTTAAGCGAATACTTAACAACTAT 39 26184872 0.990043342 7 39 384 1 1.785329835 0 0.41025641 0.62295082 39 0 0 61 3R:26184854-26184905 7 CG31323 FBtr0307339|FBtr0084988 26184611|26184611 26184974|26187307 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 26184815 26184899 3'utr CG31323 FlyBase G34701.1 ACGCTCGGAAACACACTCTCTCTTACACACAATAACATTATGGAATTCATCAAGCAATTATGTGATTTTTAAGCGAATACTTAAC 31 26184872 0.990095896 11 28 285 0.909090909 1.602059991 0 0.290322581 0.5 31 4 0 40 3R:26184815-26184899 7 31 4331 FBgn0051323 9.51 0.34 0.533333333 3.259726604 91.17647059 58.125 3 3 3 0.01 dme-miR-980-5p 7mer-A1 AAAAACA 3R 26233274 26233280 + 3R_26233274_26233280_+ 0.782911824 0.782911824 0.782911824 0 CG12290 FBtr0084990|FBtr0339612 26233100|26233100 26233329|26234700 3R + 26233141 26233289 3'utr CG12290 FlyBase G46009.1 AAACACTAAACTTGCTTGCTGAAGAATTCTAAGAACAGTATTCGTAATTTGTAAGTCTAGCAATTAACAAAGACAACTGTTTGAATTTGAGTTTTAAGACCAGATCATGCTGTCCTAGAAGCTTCTCATGCCAAAAAACAAAACCACAA 46 26233248 0.974074026 13 44 277 0.962264151 1.40654018 0.075471698 0.152173913 0.264150943 46 1 1 51 3R:26233141-26233289 7 CG12290 FBtr0339612 26233100 26234700 AAAAACA 7mer-A1 dme-miR-980-5p 3R + 26233227 26233282 3'utr CG12290 FlyBase G34708.3 TTGAGTTTTAAGACCAGATCATGCTGTCCTAGAAGCTTCTCATGCCAAAAAACAAA 19 26233256 0.974960203 5 18 88 0.967741935 1.477121255 0.258064516 0.368421053 0.612903226 19 1 0 30 3R:26233227-26233282 7 5 4332 FBgn0039419 2058.006667 56.21 86.04666667 0.002429535 0.088952144 0.058108003 26 18 22 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 26233366 26233371 + 3R_26233366_26233371_+ 1 1 1 0 CG12290 FBtr0339612 26233100 26234700 3R + 26233344 26233436 3'utr CG12290 FlyBase G46011.1 AAAAAACAAAAAACAAAACAAAGTACCTTTTAAAAAATAGAAAACTGTGTACAAGTCAAATTAACAAAGATTGAGAGTGATGGGAGTTATAAT 49 26233373 0.965197737 4 45 223 0.966666667 1.462397998 0.05 0.163265306 0.316666667 49 1 1 58 3R:26233344-26233436 6 CG12290 FBtr0339612 26233100 26234700 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 26233347 26233434 3'utr CG12290 FlyBase G34709.1 AAACAAAAAACAAAACAAAGTACCTTTTAAAAAATAGAAAACTGTGTACAAGTCAAATTAACAAAGATTGAGAGTGATGGGAGTTATA 41 26233373 0.959615906 5 38 186 0.948275862 1.740362689 0.206896552 0.292682927 0.5 41 3 0 55 3R:26233347-26233434 6 33.5 4333 FBgn0039419 2058.006667 56.21 86.04666667 0.016277887 0.595979363 0.389323623 -7 -7 -7 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 26233500 26233505 + 3R_26233500_26233505_+ 1 1 1 0 CG12290 FBtr0339612 26233100 26234700 3R + 26233470 26233518 3'utr CG12290 FlyBase G46012.1 AAGCCAAGCCAAGTTGAGATCGTAATCAATGTACCTAAGCAACTTGCAT 43 26233499 0.919940568 3 43 239 1 1.681241237 0.020833333 0.11627907 0.208333333 43 0 0 48 3R:26233470-26233518 6 CG12290 FBtr0339612 26233100 26234700 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 26233440 26233528 3'utr CG12290 FlyBase G34710.1 AGGGTGGATATCAAACTGAAAAGTGGAACCAAGCCAAGCCAAGTTGAGATCGTAATCAATGTACCTAAGCAACTTGCATATGAACATTT 37 26233499 0.971999433 5 35 210 0.983606557 1.477121255 0.032786885 0.378378378 0.62295082 37 0 1 60 3R:26233440-26233528 6 37 4334 FBgn0039419 2058.006667 56.21 86.04666667 0.017978562 0.658245864 0.429999225 1 1 1 0.01 dme-miR-980-3p 7mer-A1 GCAGCTA 3R 26233996 26234002 + 3R_26233996_26234002_+ 0.823349562 0.823349562 0.823349562 0 CG12290 FBtr0339612 26233100 26234700 3R + 26233913 26234018 3'utr CG12290 FlyBase G46014.1 CAGCAGTTAGTTAGCCTTTGGTTAGCCAACGGCTATTGGGCCATTAAGTCAATTTGCTTTTTAGAACACCGCGGGCATTGCGTGCAGCTAAATACCTCATTAGTTA 22 26233991 0.966719795 13 21 117 0.961538462 1.397940009 0.153846154 0.136363636 0.269230769 22 1 0 25 3R:26233913-26234018 7 CG12290 FBtr0339612 26233100 26234700 GCAGCTA 7mer-A1 dme-miR-980-3p 3R + 26233958 26234002 3'utr CG12290 FlyBase G34712.1 AAGTCAATTTGCTTTTTAGAACACCGCGGGCATTGCGTGCAGCTA 6 26233998 0.969751968 5 5 31 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3R:26233958-26234002 7 8 4335 FBgn0039419 2058.006667 56.21 86.04666667 0.003887257 0.14232343 0.092972805 5 -2 1.5 0.01 dme-miR-11-3p 7mer-m1 TGTGATG 3R 26234358 26234364 + 3R_26234358_26234364_+ 0.612071121 0.612071121 0.612071121 0 CG12290 FBtr0339612 26233100 26234700 3R + 26234341 26234514 3'utr CG12290 FlyBase G46018.1 ATTTCAAAACCAATTATTGTGATGTTGAGCAAGGGGGCAACCAAGAATGTAATTTCGAAATGCATTAAAAATAACTTAAAACATGTATTAATAGTTATAATATATACAAGCTTATGTGTGTATACATACTTTACTAAATAGTGATATTTTTTCAAATTTATTCAACTGTCATTC 71 26234357 0.984499027 18 68 545 0.938271605 1.579783597 0.172839506 0.126760563 0.234567901 71 4 1 76 3R:26234341-26234514 7 CG12290 FBtr0339612 26233100 26234700 TGTGATG 7mer-m1 dme-miR-11-3p 3R + 26234311 26234382 3'utr CG12290 FlyBase G34715.1 ATTCATGCATGTGTGTCGGACAAAGGAAATATTTCAAAACCAATTATTGTGATGTTGAGCAAGGGGGCAACC 25 26234357 0.980170331 8 24 171 0.923076923 1.556302501 0.512820513 0.36 0.58974359 25 3 0 36 3R:26234311-26234382 7 38 4336 FBgn0039419 2058.006667 56.21 86.04666667 0.018464469 0.676036292 0.441620826 1 1 1 0.01 dme-miR-184-5p 7mer-m8 TGATAAG 3R 26254725 26254731 - 3R_26254725_26254731_- 0.658999343 0.658999343 0.658999343 0 Ald FBtr0084994|FBtr0339614 26254067|26254601 26255341|26255341 3R - 26254692 26254792 3'utr Ald FlyBase G54819.1 GATCCACTATGAAAATCGATGTTTTACCATTATTATTATTATTAAACTTTATATTTATGATTGATAAGTATAAGTGAAACAAATGACGAGAATAAACAAAC 12 26254709 0.992094115 9 10 114 0.769230769 1 0.230769231 0.083333333 0.153846154 12 3 0 10 3R:26254692-26254792 7 Ald FBtr0339614|FBtr0084994 26254601|26254067 26255341|26255341 TGATAAG 7mer-m8 dme-miR-184-5p 3R - 26254692 26254796 3'utr Ald FlyBase G41383.1 AAAAGATCCACTATGAAAATCGATGTTTTACCATTATTATTATTATTAAACTTTATATTTATGATTGATAAGTATAAGTGAAACAAATGACGAGAATAAACAAAC 13 26254761 0.989412884 9 12 114 1 1.301029996 0.05 0.384615385 0.6 13 0 0 20 3R:26254692-26254796 7 3 4337 FBgn0000064 2998.926667 179.2266667 272.1633333 0.001000358 0.016738581 0.011022793 -22 30 4 0.01 dme-miR-282-5p 6mer2-7 GAGGCT 3R 26254847 26254852 - 3R_26254847_26254852_- 1 1 1 0 Ald FBtr0084994|FBtr0339614 26254067|26254601 26255341|26255341 3R - 26254808 26254881 3'utr Ald FlyBase G54820.1 CAATCACTATCAGCAACACCTAAATGTATGAGGCTTGTAACATTGAAGTCGCACAACGTTTTTTGAATTTTTTT 186 26254853 0.914834612 10 185 1192 0.995495495 2.344392274 0.018018018 0.150537634 0.288288288 186 1 0 221 3R:26254808-26254881 6 Ald FBtr0339614|FBtr0084994 26254601|26254067 26255341|26255341 GAGGCT 6mer2-7 dme-miR-282-5p 3R - 26254826 26254876 3'utr Ald FlyBase G41384.1 ACTATCAGCAACACCTAAATGTATGAGGCTTGTAACATTGAAGTCGCACAA 67 26254853 0.946240926 8 67 408 1 2.012837225 0 0.417910448 0.621359223 67 0 0 103 3R:26254826-26254876 6 125 4338 FBgn0000064 2998.926667 179.2266667 272.1633333 0.041681579 0.697440857 0.459283029 1 1 1 0.01 dme-miR-2b-2-5p 6mer3-8 TTGAAG 3R 26254989 26254994 - 3R_26254989_26254994_- 1 1 1 0 Ald FBtr0084994|FBtr0339614 26254067|26254601 26255341|26255341 3R - 26254943 26255050 3'utr Ald FlyBase G54821.1 AATTCAACAATTCAAACAATTTTATCTTTAGTTTTAAGCACATGAACCTATTATTGTTGAAGTTATTACATTTCTATTCTATTATTATGATTATGCAAGATTTCAATG 42 26255008 0.991144169 14 41 437 0.979591837 1.681241237 0.06122449 0.166666667 0.285714286 42 1 0 48 3R:26254943-26255050 6 Ald FBtr0339614|FBtr0084994 26254601|26254067 26255341|26255341 TTGAAG 6mer3-8 dme-miR-2b-2-5p 3R - 26254987 26255031 3'utr Ald FlyBase G41385.1 TTTTATCTTTAGTTTTAAGCACATGAACCTATTATTGTTGAAGTT 16 26255008 0.888927535 5 15 167 0.961538462 1.096910013 0 0.4375 0.653846154 16 0 1 25 3R:26254987-26255031 6 7.5 4339 FBgn0000064 2998.926667 179.2266667 272.1633333 0.002500895 0.041846451 0.027556982 14 14 14 0.01 dme-miR-2a-2-5p 7mer-m8 TGATGAG 3R 26255088 26255094 - 3R_26255088_26255094_- 0.658999343 0.658999343 0.658999343 0 Ald FBtr0084994|FBtr0339614 26254067|26254601 26255341|26255341 3R - 26255067 26255122 3'utr Ald FlyBase G54822.1 TATAACATTATTTTAGAGAACAACTAAATGATGAGTGCAGAAGAAAGGATTGAATA 25 26255092 0.73773295 5 24 106 1 1.477121255 0 0.16 0.3 25 0 0 30 3R:26255067-26255122 7 Ald FBtr0339614|FBtr0084994 26254601|26254067 26255341|26255341 TGATGAG 7mer-m8 dme-miR-2a-2-5p 3R - 26255053 26255110 3'utr Ald FlyBase G41386.1 TTAGAGAACAACTAAATGATGAGTGCAGAAGAAAGGATTGAATATGTTCGATGGAGAA 15 26255092 0.924426397 7 15 54 1 1.278753601 0.368421053 0.2 0.368421053 15 0 0 19 3R:26255053-26255110 7 17.5 4340 FBgn0000064 2998.926667 179.2266667 272.1633333 0.005835421 0.09764172 0.064299624 -2 -2 -2 0.01 dme-miR-184-3p 6mer3-8 TCCGTC 3R 26256258 26256263 - 3R_26256258_26256263_- 1 1 1 0 Ald FBtr0114544|FBtr0085000 26255964|26255964 26256527|26256527 3R - 26256240 26256288 3'utr Ald FlyBase G54829.1 AGGGTATTTACGTGCCCGGCTCAATTCCGTCGTTTGCCGGCAATGCCAA 84 26256264 0.789324862 3 84 576 1 1.968482949 0.268817204 0.107142857 0.193548387 84 0 0 93 3R:26256240-26256288 6 Ald FBtr0085000|FBtr0114544 26255964|26255964 26256527|26256527 TCCGTC 6mer3-8 dme-miR-184-3p 3R - 26256235 26256288 3'utr Ald FlyBase G41391.1 AGGGTATTTACGTGCCCGGCTCAATTCCGTCGTTTGCCGGCAATGCCAACCTCT 33 26256264 0.796186436 3 33 241 1 1.643452676 0.136363636 0.242424242 0.431818182 33 0 0 44 3R:26256235-26256288 6 58.5 4341 FBgn0000064 2998.926667 179.2266667 272.1633333 0.019506979 0.326402321 0.214944457 1 1 1 0.01 dme-miR-304-5p 6mer3-8 TGAGAT 3R 26453746 26453751 + 3R_26453746_26453751_+ 0.999999935 0.999999998 0.999999966 7.07E-08 CG5447 FBtr0085012 26453708 26454585 3R + 26453708 26453821 stop_codon CG5447 FlyBase G46024.1 GACTTCCGCTTTCCCATTCAGCCAACGAGTTTTTCATGTGAGATCGAGCAGCTACAGTCGCATCAACAGGCATGTGAAGGAGAAGAGTCCGTTTCAGCAATTATCAAGCAAAAG 34 26453745 0.970220556 11 32 180 0.945945946 1.544068044 0.216216216 0.088235294 0.162162162 34 2 0 35 3R:26453708-26453821 6 CG5447 FBtr0085012 26453708 26454585 TGAGAT 6mer3-8 dme-miR-304-5p 3R + 26453731 26453772 stop_codon CG5447 FlyBase G34720.1 AACGAGTTTTTCATGTGAGATCGAGCAGCTACAGTCGCATCA 13 26453745 0.711705003 4 12 74 0.952380952 1.301029996 0.19047619 0.461538462 0.666666667 13 1 0 20 3R:26453731-26453772 6 15 4342 FBgn0039427 734.0633333 64.46 98.42666667 0.020434204 0.232702451 0.152397724 1 1 1 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 3R 26454175 26454181 + 3R_26454175_26454181_+ 0.620204266 0.620204266 0.620204266 0 CG5447 FBtr0330152|FBtr0085012 26453747|26453708 26454585|26454585 3R + 26454087 26454192 3'utr CG5447 FlyBase G46027.1 TTAATGATTAGCCAAGGCAGTGTACGGCCAGTTAGTTAGTATTTATGCAATAGCAGGCATAGTCATGTAAGTGAAAAGCTACCGAAACTGCATTTTGAGCCGAAGC 16 26454182 0.916428583 9 14 81 0.80952381 1.230448921 0.476190476 0.125 0.333333333 16 4 0 17 3R:26454087-26454192 7 CG5447 FBtr0330152|FBtr0085012 26453747|26453708 26454585|26454585 TGCATTT 7mer-m8 dme-miR-277-3p 3R + 26454160 26454191 3'utr CG5447 FlyBase G34724.1 AAAAGCTACCGAAACTGCATTTTGAGCCGAAG 5 26454181 0.85395908 3 4 25 0.777777778 0.84509804 0.111111111 0.6 0.777777778 5 2 0 7 3R:26454160-26454191 7 6.5 4343 FBgn0039427 734.0633333 64.46 98.42666667 0.008854822 0.100837729 0.066039014 -7 -6 -6.5 0.01 dme-miR-283-5p 6mer3-8 TGATAT 3R 26469459 26469464 + 3R_26469459_26469464_+ 1 1 1 0 CG5455 FBtr0085015|FBtr0085016 26469401|26469401 26470008|26470008 3R + 26469438 26469536 3'utr CG5455 FlyBase G46035.1 AAGTATACTGTATGTAGGACCTGATATATTTAAACCATAATGTGTATAGAACCGACAATTTGATGATAATTACGCGTACCTATATGAGATGCCACAGCA 59 26469450 0.982832237 14 57 439 0.96969697 1.806179974 0.045454545 0.101694915 0.196969697 59 2 0 64 3R:26469438-26469536 6 CG5455 FBtr0085015|FBtr0085016 26469401|26469401 26470008|26470008 TGATAT 6mer3-8 dme-miR-283-5p 3R + 26469434 26469474 3'utr CG5455 FlyBase G34732.1 TAAAAAGTATACTGTATGTAGGACCTGATATATTTAAACCA 35 26469450 0.70932435 5 32 248 0.963636364 1.72427587 0.036363636 0.4 0.618181818 35 2 0 53 3R:26469434-26469474 6 35 4344 FBgn0039430 151.6666667 6.406666667 9.843333333 0.230769231 5.463059313 3.555706062 9 9 9 0.01 dme-miR-11-3p 7mer-m1 TGTGATG 3R 26469771 26469777 + 3R_26469771_26469777_+ 0.612071121 0.612071121 0.612071121 0 CG5455 FBtr0085015|FBtr0085016 26469401|26469401 26470008|26470008 3R + 26469603 26469788 3'utr CG5455 FlyBase G46036.1 CATATAATTATATACGCCTATCCATAGCTCAAGTTAGTTATACACATATTATGTTGCCTTTAGTTTAAGCTTAAAACGAGCAGATATATATGCTCAGACATCCCATCTGGTGTCAATGATATTTTGGAATTTTTGTGATCGATTGTGATCATTTTTCAAGCACTTTATTGTGATGATCCCCTAAAT 72 26469769 0.988761666 21 68 622 0.956521739 1.643452676 0.054347826 0.236111111 0.402173913 72 3 1 88 3R:26469603-26469788 7 CG5455 FBtr0085015|FBtr0085016 26469401|26469401 26470008|26470008 TGTGATG 7mer-m1 dme-miR-11-3p 3R + 26469695 26469786 3'utr CG5455 FlyBase G34735.1 CTCAGACATCCCATCTGGTGTCAATGATATTTTGGAATTTTTGTGATCGATTGTGATCATTTTTCAAGCACTTTATTGTGATGATCCCCTAA 47 26469770 0.987461187 15 45 402 0.970588235 1.342422681 0.220588235 0.361702128 0.558823529 47 0 2 66 3R:26469695-26469786 7 36 4345 FBgn0039430 151.6666667 6.406666667 9.843333333 0.237362637 5.619146722 3.657297663 2 1 1.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 3R 26472059 26472066 - 3R_26472059_26472066_- 0.674982063 0.674982063 0.674982063 0 plum FBtr0302210|FBtr0305049|FBtr0302209|FBtr0344120 26471101|26470076|26471101|26471101 26472978|26472978|26472978|26472978 3R - 26472042 26472123 3'utr plum FlyBase G54845.1 AATTTCCGCATATTTACTGCTGCATTTTGTTTTGTTTACACAACCGATATATCAAATGTACCTGATTATATTCATTTTGCAT 674 26472067 0.985346554 9 664 5491 0.989384289 2.492294658 0.527600849 0.24925816 0.462845011 674 8 2 932 3R:26472042-26472123 8 plum FBtr0302210|FBtr0305049|FBtr0302209|FBtr0344120 26471101|26470076|26471101|26471101 26472978|26472978|26472978|26472978 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R - 26472044 26472092 3'utr plum FlyBase G41400.1 TTGTTTACACAACCGATATATCAAATGTACCTGATTATATTCATTTTGC 448 26472067 0.847330742 8 439 3595 0.98694517 2.878521796 0.54308094 0.407158837 0.654046997 447 10 0 756 3R:26472044-26472092 8 557.5 4346 FBgn0039431 3110.826667 52.34666667 80.39 0.179212814 10.65015283 6.934942157 1 1 1 0.01 dme-miR-282-5p 6mer2-7 GAGGCT 3R 26472560 26472565 - 3R_26472560_26472565_- 1 1 1 0 plum FBtr0302210|FBtr0305049|FBtr0302209|FBtr0344120 26471101|26470076|26471101|26471101 26472978|26472978|26472978|26472978 3R - 26472541 26472583 3'utr plum FlyBase G54846.1 TTGTTTTTTTCGTTAATTGAGGCTCATTTTTACATGTAACTTT 85 26472567 0.837523237 7 85 883 1 2.041392685 0.127272727 0.223529412 0.4 85 0 0 110 3R:26472541-26472583 6 plum FBtr0302210|FBtr0305049|FBtr0302209|FBtr0344120 26471101|26470076|26471101|26471101 26472978|26472978|26472978|26472978 GAGGCT 6mer2-7 dme-miR-282-5p 3R - 26472540 26472586 3'utr plum FlyBase G41401.1 TGTTTGTTTTTTTCGTTAATTGAGGCTCATTTTTACATGTAACTTTT 70 26472567 0.83958246 6 68 721 0.969072165 1.973127854 0.164948454 0.271428571 0.474226804 70 3 0 94 3R:26472540-26472586 6 77.5 4347 FBgn0039431 3110.826667 52.34666667 80.39 0.024912992 1.480514519 0.964050255 2 2 2 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 26472820 26472825 - 3R_26472820_26472825_- 0.985139937 1 0.992569969 0.010507677 plum FBtr0302210|FBtr0305049|FBtr0302209|FBtr0344120 26471101|26470076|26471101|26471101 26472978|26472978|26472978|26472978 3R - 26472819 26472909 3'utr plum FlyBase G54849.1 AGGAGATGGGCGAAAAGTTATATAGGAGAGAAAACCACATTCACAGCTCGAAACATTCCAAAAGAGTAGTGATTACGCAGATAATGATGAT 83 26472854 0.967806337 12 61 332 0.760869565 1.243038049 0.054347826 0.108433735 0.195652174 83 19 3 70 3R:26472819-26472909 6 plum FBtr0302210|FBtr0305049|FBtr0302209|FBtr0344120 26471101|26470076|26471101|26471101 26472978|26472978|26472978|26472978 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R - 26472819 26472896 3'utr plum FlyBase G41403.1 AAAGTTATATAGGAGAGAAAACCACATTCACAGCTCGAAACATTCCAAAAGAGTAGTGATTACGCAGATAATGATGAT 37 26472854 0.977293099 9 25 163 0.692307692 1.556302501 0.134615385 0.324324324 0.519230769 37 16 0 36 3R:26472819-26472896 6 1.5 4348 FBgn0039431 3110.826667 52.34666667 80.39 0.000482187 0.02865512 0.018659037 29 29 29 0.01 dme-miR-8-3p 7mer-m8 CAGTATT 3R 26472966 26472972 - 3R_26472966_26472972_- 0.661615243 0.661615243 0.661615243 0 plum FBtr0302210|FBtr0305049|FBtr0302209|FBtr0344120 26471101|26470076|26471101|26471101 26472978|26472978|26472978|26472978 3R - 26472934 26473004 stop_codon plum FlyBase G54850.1 GAGCCCAGGTGGATCCCAATGGGTGAAGCAAGCAGTATTTTTATGAAGCTACAACATAGAAGCAAGCAAAA 11 26472965 0.982692912 6 9 66 0.818181818 0.653212514 0.272727273 0 0 11 1 1 9 3R:26472934-26473004 7 plum FBtr0302210|FBtr0305049|FBtr0302209|FBtr0344120 26471101|26470076|26471101|26471101 26472978|26472978|26472978|26472978 CAGTATT 7mer-m8 dme-miR-8-3p 3R - 26472936 26473005 stop_codon plum FlyBase G41404.1 CGAGCCCAGGTGGATCCCAATGGGTGAAGCAAGCAGTATTTTTATGAAGCTACAACATAGAAGCAAGCAA 11 26472965 0.98220307 6 10 67 0.8 1.204119983 0.35 0.545454545 0.75 11 4 0 16 3R:26472936-26473005 7 7.5 4349 FBgn0039431 3110.826667 52.34666667 80.39 0.002410935 0.143275599 0.093295186 -7 -7 -7 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 3R 26594856 26594861 + 3R_26594856_26594861_+ 1 1 1 0 scrib FBtr0308622|FBtr0308620|FBtr0335522|FBtr0308621|FBtr0308625 26594814|26594814|26594814|26594814|26594814 26595018|26596188|26596188|26596188|26596188 3R + 26594835 26594888 3'utr scrib FlyBase G46051.1 CCCTCACTACGACTTGTGCGAATGTGACACGTTCATTAACCATAGCTTTAAGTG 10 26594858 0.826288915 5 9 63 0.909090909 0.698970004 0.363636364 0.1 0.181818182 10 0 1 10 3R:26594835-26594888 6 scrib FBtr0308625|FBtr0308621|FBtr0335522|FBtr0308620|FBtr0308622 26594814|26594814|26594814|26594814|26594814 26596188|26596188|26596188|26596188|26595018 ATGTGA 6mer3-8 dme-miR-1003-3p 3R + 26594816 26594882 3'utr scrib FlyBase G34741.2 ACTAAACTAAGCTCTGACACCCTCACTACGACTTGTGCGAATGTGACACGTTCATTAACCATAGCTT 9 26594849 0.967780467 6 8 44 0.866666667 1.113943352 0.2 0.555555556 0.733333333 9 2 0 13 3R:26594816-26594882 6 5.5 4350 FBgn0263289 2418.266667 41.02 62.81333333 0.002274356 0.134080936 0.087561027 -2 7 2.5 0.01 dme-miR-986-5p 7mer-A1 TTCGAGA 3R 26594944 26594950 + 3R_26594944_26594950_+ 0.823349562 0.823349562 0.823349562 0 scrib FBtr0308622|FBtr0308620|FBtr0335522|FBtr0308621|FBtr0308625 26594814|26594814|26594814|26594814|26594814 26595018|26596188|26596188|26596188|26596188 3R + 26594919 26594954 3'utr scrib FlyBase G46052.1 AGTGTTTATTTCGAACGAGACTTTTTTCGAGACTAA 7 26594942 0.730538459 2 6 49 0.875 0.84509804 0.25 0.142857143 0.25 7 1 0 7 3R:26594919-26594954 7 scrib FBtr0308625|FBtr0308621|FBtr0335522|FBtr0308620|FBtr0308622 26594814|26594814|26594814|26594814|26594814 26596188|26596188|26596188|26596188|26595018 TTCGAGA 7mer-A1 dme-miR-986-5p 3R + 26594926 26594959 3'utr scrib FlyBase G34742.1 ATTTCGAACGAGACTTTTTTCGAGACTAAGCTAC 8 26594942 0.975840858 3 7 52 1 0.954242509 0.222222222 0.125 0.222222222 8 0 0 9 3R:26594926-26594959 7 6.5 4351 FBgn0263289 2418.266667 41.02 62.81333333 0.002687876 0.158459288 0.103481214 2 2 2 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 26595943 26595948 + 3R_26595943_26595948_+ 1 1 1 0 scrib FBtr0308620|FBtr0308620|FBtr0308620|FBtr0335522|FBtr0335522|FBtr0335522|FBtr0308621|FBtr0308621|FBtr0308621|FBtr0308625|FBtr0308625|FBtr0308625 26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814 26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188 3R + 26595928 26595993 3'utr scrib FlyBase G46054.1 TTTATATGTTAATATCTGTGAACAAAGCAACCACATAAATAAGAACTGCTTAACGATGTATTAAAA 85 26595942 0.794530027 8 83 489 0.981132075 2.017033339 0.132075472 0.188235294 0.349056604 85 2 0 104 3R:26595928-26595993 6 scrib FBtr0308625|FBtr0308625|FBtr0308625|FBtr0308621|FBtr0308621|FBtr0308621|FBtr0335522|FBtr0335522|FBtr0335522|FBtr0308620|FBtr0308620|FBtr0308620 26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814 26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 26595931 26596014 3'utr scrib FlyBase G34743.1 ATATGTTAATATCTGTGAACAAAGCAACCACATAAATAAGAACTGCTTAACGATGTATTAAAATAACTACTGACTACGGTTATG 36 26595942 0.769942051 8 32 207 0.928571429 1.716003344 0.196428571 0.416666667 0.625 36 4 0 52 3R:26595931-26596014 6 49 4352 FBgn0263289 2418.266667 41.02 62.81333333 0.020262447 1.194539249 0.780089153 1 1 1 0.01 dme-miR-305-3p 7mer-A1 TGTGCCA 3R 26596097 26596103 + 3R_26596097_26596103_+ 0.782845678 0.717647983 0.75024683 0.046101736 scrib FBtr0308620|FBtr0335522|FBtr0308621|FBtr0308625 26594814|26594814|26594814|26594814 26596188|26596188|26596188|26596188 3R + 26596043 26596121 3'utr scrib FlyBase G46055.1 CCATTACCATTACTATTATTAATCATCCACATATGTACGTATTTGTCATCGATTTGTGCCATACATATTTTATGTAACT 19 26596096 0.806837107 7 16 178 0.913043478 1.322219295 0 0.210526316 0.347826087 19 2 0 21 3R:26596043-26596121 7 scrib FBtr0308625|FBtr0308621|FBtr0335522|FBtr0308620 26594814|26594814|26594814|26594814 26596188|26596188|26596188|26596188 TGTGCCA 7mer-A1 dme-miR-305-3p 3R + 26596081 26596122 3'utr scrib FlyBase G34744.1 GTATTTGTCATCGATTTGTGCCATACATATTTTATGTAACTC 20 26596097 0.739332137 6 20 184 1 1.447158031 0 0.3 0.5 20 0 0 28 3R:26596081-26596122 7 17.5 4353 FBgn0263289 2418.266667 41.02 62.81333333 0.007236588 0.42662116 0.278603269 1 0 0.5 0.01 dme-miR-13b-2-5p 6mer2-7 TTGACG 3R 26715618 26715623 - 3R_26715618_26715623_- 1 1 1 0 CG6425 FBtr0085047 26715163 26716018 3R - 26715604 26715657 3'utr CG6425 FlyBase G54860.1 AGGTGGATACGACTGGTCGCCGACAGGCAGTGAATTGACGTCCCCCGGTTGAGC 12 26715623 0.928727298 3 12 43 1 1.079181246 0.083333333 0 0 12 0 0 12 3R:26715604-26715657 6 CG6425 FBtr0085047 26715163 26716018 TTGACG 6mer2-7 dme-miR-13b-2-5p 3R - 26715597 26715645 3'utr CG6425 FlyBase G41413.1 CTGGTCGCCGACAGGCAGTGAATTGACGTCCCCCGGTTGAGCTTTCATT 8 26715623 0.94651519 3 8 41 1 1.146128036 0.357142857 0.625 0.785714286 8 0 0 14 3R:26715597-26715645 6 9 4354 FBgn0039449 117.6666667 6.803333333 10.38 0.076487252 1.322880941 0.867052023 0 0 0 0.01 dme-miR-11-3p 7mer-m1 TGTGATG 3R 26715954 26715960 - 3R_26715954_26715960_- 0.612071121 0.612071121 0.612071121 0 CG6425 FBtr0085047 26715163 26716018 3R - 26715933 26716009 3'utr CG6425 FlyBase G54861.1 AGGTAACCAGCCCCTGAATACAATCAGCTTCCCTTCAGCGAGTACCAATTGTGATGAGCAAAGTTAGAGTTTAAGAT 76 26715961 0.748998765 8 70 433 0.936170213 1.245512668 0.489361702 0.184210526 0.340425532 76 2 4 88 3R:26715933-26716009 7 CG6425 FBtr0085047 26715163 26716018 TGTGATG 7mer-m1 dme-miR-11-3p 3R - 26715883 26716002 3'utr CG6425 FlyBase G41414.1 CAGCCCCTGAATACAATCAGCTTCCCTTCAGCGAGTACCAATTGTGATGAGCAAAGTTAGAGTTTAAGATATTTCGTTTTGTTTCGCTTGACTTGCGTGCCCCCTTGCCTGAGCATTCTG 77 26715961 0.764524821 13 72 454 0.933333333 1.204119983 0.425 0.402597403 0.616666667 77 2 6 112 3R:26715883-26716002 7 61.5 4355 FBgn0039449 117.6666667 6.803333333 10.38 0.52266289 9.039686428 5.924855491 1 1 1 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 26720703 26720708 - 3R_26720703_26720708_- 1 1 1 0 CG6420 FBtr0339242|FBtr0085046 26719845|26720322 26720787|26720787 3R - 26720649 26720839 stop_codon CG6420 FlyBase G54869.1 TCAGCACTTGTCACCTGGACAGGCGGCGGCGCCCGGCGGGACGGTAATTTAGTTCAATAAAGTGGACTTGGTCAACTATCAGCGTAATCTTGTCAAGCAGCAGGAGCAGGAGCAGCAACAGAAGCAGTCGGTGATCTAGGTTAAAGCTAGGCGATTGATTTCGGTAATTTATTGATAGGAGCAAGAGTTTT 301 26720703 0.967087235 27 292 1627 0.973837209 2.224014811 0.212209302 0.119601329 0.229651163 301 8 1 335 3R:26720649-26720839 6 CG6420 FBtr0339242|FBtr0085046 26719845|26720322 26720787|26720787 TGATCT 6mer3-8 dme-bantam-3p 3R - 26720657 26720798 stop_codon CG6420 FlyBase G41419.1 CGGTAATTTAGTTCAATAAAGTGGACTTGGTCAACTATCAGCGTAATCTTGTCAAGCAGCAGGAGCAGGAGCAGCAACAGAAGCAGTCGGTGATCTAGGTTAAAGCTAGGCGATTGATTTCGGTAATTTATTGATAGGAGCA 195 26720703 0.964444557 16 191 999 0.98392283 2.485721426 0.199356913 0.405128205 0.627009646 195 5 0 306 3R:26720657-26720798 6 212.5 4356 FBgn0039451 839.37 25.00666667 38.08 0.253166065 8.497733938 5.580357143 -5 -5 -5 0.01 dme-miR-980-3p 6mer3-8 GGCAGC 3R 26784976 26784981 + 3R_26784976_26784981_+ 1 1 1 0 CG42790 FBtr0310469 26784837 26785753 3R + 26784960 26784994 3'utr CG42790 FlyBase G46066.1 ACACACCCATCTATTTGGCAGCCAGACTTTGATTC 15 26784974 0.723764838 3 14 78 0.941176471 1.204119983 0 0.133333333 0.235294118 15 1 0 16 3R:26784960-26784994 6 CG42790 FBtr0310469 26784837 26785753 GGCAGC 6mer3-8 dme-miR-980-3p 3R + 26784961 26784988 3'utr CG42790 FlyBase G34754.1 CACACCCATCTATTTGGCAGCCAGACTT 6 26784974 0.945017399 2 6 28 1 1 0 0.5 0.7 6 0 0 10 3R:26784961-26784988 6 10.5 4357 FBgn0261861 0.333333333 0.033333333 0.05 31.5 315 210 2 2 2 0.01 dme-miR-34-5p 8mer-A1 CACTGCCA 3R 26841228 26841235 + 3R_26841228_26841235_+ 0.678407974 0.678407974 0.678407974 0 Tl FBtr0085059|FBtr0330154|FBtr0330155 26841146|26841206|26841146 26842403|26842403|26841915 3R + 26841211 26841253 3'utr Tl FlyBase G46077.1 GAAGCCTCCAAGAAGAACACTGCCACTGACGAGGCGGCGGTGA 10 26841237 0.811200197 2 8 17 0.9 0.954242509 0.3 0 0 10 1 0 9 3R:26841211-26841253 8 Tl FBtr0330155|FBtr0085059|FBtr0330154 26841146|26841146|26841206 26841915|26842403|26842403 CACTGCCA 8mer-A1 dme-miR-34-5p 3R + 26841161 26841252 stop_codon Tl FlyBase G34760.1 CGGAGCTGTTTCAGTTCGATCCCGACGATGAGCTATTGTTCCGTTAAAGAGAAGCCTCCAAGAAGAACACTGCCACTGACGAGGCGGCGGTG 10 26841237 0.997484775 4 9 43 0.947368421 1.255272505 0.473684211 0.3 0.631578947 10 1 0 18 3R:26841161-26841252 8 7.5 4358 FBgn0262473 3258.3 76.28333333 116.6733333 0.002301814 0.098317675 0.064282041 -9 -9 -9 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 26842156 26842161 + 3R_26842156_26842161_+ 1 1 1 0 Tl FBtr0085059|FBtr0330154 26841146|26841206 26842403|26842403 3R + 26842146 26842239 3'utr Tl FlyBase G46082.2 CATGTCATCTACCAAACAATTAGGCTAGCTCTTCATCCATACAAAAACCAGAATGAATATCGTCTATGATACGTAAATGTAATTAAGCTAAACT 43 26842165 0.834257186 12 40 264 0.96 1.681241237 0.1 0.162790698 0.28 43 2 0 48 3R:26842146-26842239 6 Tl FBtr0085059|FBtr0330154 26841146|26841206 26842403|26842403 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 26842143 26842236 3'utr Tl FlyBase G34764.1 TATCATGTCATCTACCAAACAATTAGGCTAGCTCTTCATCCATACAAAAACCAGAATGAATATCGTCTATGATACGTAAATGTAATTAAGCTAA 26 26842155 0.973396224 6 25 154 0.975609756 1.602059991 0.024390244 0.461538462 0.658536585 26 1 0 40 3R:26842143-26842236 6 13 4359 FBgn0262473 3258.3 76.28333333 116.6733333 0.003989811 0.170417304 0.111422204 -9 1 -4 0.01 dme-miR-980-5p 6mer2-7 AAAAAC 3R 26842188 26842193 + 3R_26842188_26842193_+ 1 0.999999993 0.999999996 0 Tl FBtr0085059|FBtr0330154 26841146|26841206 26842403|26842403 3R + 26842146 26842239 3'utr Tl FlyBase G46082.2 CATGTCATCTACCAAACAATTAGGCTAGCTCTTCATCCATACAAAAACCAGAATGAATATCGTCTATGATACGTAAATGTAATTAAGCTAAACT 43 26842165 0.834257186 12 40 264 0.96 1.681241237 0.1 0.162790698 0.28 43 2 0 48 3R:26842146-26842239 6 Tl FBtr0085059|FBtr0330154 26841146|26841206 26842403|26842403 AAAAAC 6mer2-7 dme-miR-980-5p 3R + 26842143 26842236 3'utr Tl FlyBase G34764.1 TATCATGTCATCTACCAAACAATTAGGCTAGCTCTTCATCCATACAAAAACCAGAATGAATATCGTCTATGATACGTAAATGTAATTAAGCTAA 26 26842199 0.973396224 6 25 154 0.975609756 1.602059991 0.024390244 0.461538462 0.658536585 26 1 0 40 3R:26842143-26842236 6 8 4360 FBgn0262473 3258.3 76.28333333 116.6733333 0.002455268 0.104872187 0.06856751 23 -11 6 0.01 dme-miR-252-5p 7mer-m8 GTACTTA 3R 26842575 26842581 - 3R_26842575_26842581_- 0.588299917 0.588299917 0.588299917 0 Lerp FBtr0334310|FBtr0085099|FBtr0300939|FBtr0085097 26842460|26842460|26842460|26842460 26843181|26843181|26843181|26843181 3R - 26842554 26842706 3'utr Lerp FlyBase G54881.1 ATAACCAGTATAGCGCAGCAGCTTTTTCCTTCCATAAAAGATGTGATTTCATTTTTAAAACTTTCAAGTGCAGCTTGTTAGTGGTATTCCTTTGAAACGATTTGTATTTTACTCTAAGGCAATCTGTACTTACATTTATGTTTGTGTCTTGAG 126 26842582 0.978177495 19 122 1114 0.962962963 2.193124598 0.080246914 0.246031746 0.413580247 126 6 0 156 3R:26842554-26842706 7 Lerp FBtr0334310|FBtr0085099|FBtr0300939|FBtr0085097 26842460|26842460|26842460|26842460 26843181|26843181|26843181|26843181 GTACTTA 7mer-m8 dme-miR-252-5p 3R - 26842533 26842705 3'utr Lerp FlyBase G41428.1 TAACCAGTATAGCGCAGCAGCTTTTTCCTTCCATAAAAGATGTGATTTCATTTTTAAAACTTTCAAGTGCAGCTTGTTAGTGGTATTCCTTTGAAACGATTTGTATTTTACTCTAAGGCAATCTGTACTTACATTTATGTTTGTGTCTTGAGTTGTTTTTAGTTCAATAAGGC 80 26842582 0.987529309 15 78 706 0.982300885 2.045322979 0.03539823 0.3 0.504424779 80 2 0 111 3R:26842533-26842705 7 39 4361 FBgn0051072 373.47 12.92333333 19.75 0.104426058 3.017797266 1.974683544 1 1 1 0.01 dme-miR-932-5p 6mer2-7 GAATTG 3R 26868988 26868993 + 3R_26868988_26868993_+ 1 1 1 0 His2Av FBtr0334311 26868585 26869220 3R + 26868983 26869044 3'utr His2Av FlyBase G46093.1 GTAAAGAATTGCAACTACATAGATGGTAATTAATTTCAGCTGTAAGAAGTACAAGTTTTTCA 15 26868991 0.919949959 5 14 102 0.875 1.146128036 0.0625 0.066666667 0.125 15 2 0 14 3R:26868983-26869044 6 His2Av FBtr0334311 26868585 26869220 GAATTG 6mer2-7 dme-miR-932-5p 3R + 26868968 26869069 3'utr His2Av FlyBase G34774.1 CTTGTGTCGATGAATGTAAAGAATTGCAACTACATAGATGGTAATTAATTTCAGCTGTAAGAAGTACAAGTTTTTCATAATTGTGAGAAAAGTGCAGTAGTA 13 26868991 0.976481393 10 13 79 1 1.342422681 0.181818182 0.384615385 0.636363636 13 0 0 22 3R:26868968-26869069 6 8 4362 FBgn0001197 5513.57 740.2033333 1128.183333 0.001450966 0.010807841 0.007091046 -3 -3 -3 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 3R 26869202 26869208 + 3R_26869202_26869208_+ 0.823349562 0.823349562 0.823349562 0 His2Av FBtr0334311 26868585 26869220 3R + 26869164 26869223 3'utr His2Av FlyBase G46096.1 CACAACTGTAGCTTTTCATCCGAAAGATAATAATGAATAGACTGACCTGACGTTTTTCAA 20 26869200 0.958613419 6 19 95 0.96875 1.491361694 0.46875 0.4 0.625 20 1 0 31 3R:26869164-26869223 7 His2Av FBtr0334311 26868585 26869220 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 26869170 26869216 3'utr His2Av FlyBase G34775.1 TGTAGCTTTTCATCCGAAAGATAATAATGAATAGACTGACCTGACGT 10 26869201 0.704427486 7 9 51 0.882352941 1.176091259 0.294117647 0.6 0.764705882 10 2 0 15 3R:26869170-26869216 7 12.5 4363 FBgn0001197 5513.57 740.2033333 1128.183333 0.002267134 0.016887252 0.011079759 2 1 1.5 0.01 dme-bantam-3p 7mer-A1 GATCTCA 3R 26872393 26872399 - 3R_26872393_26872399_- 0.823349562 0.823349562 0.823349562 0 Rb97D FBtr0085093 26872127 26873864 3R - 26872373 26872420 3'utr Rb97D FlyBase G54913.1 TCGTAAGGTAAGTTAGTAACGGATCTCATCTAGGATAAACTAGAGTTT 35 26872391 0.690347602 6 32 251 0.923076923 1.255272505 0.128205128 0.114285714 0.205128205 35 2 1 36 3R:26872373-26872420 7 Rb97D FBtr0085093 26872127 26873864 GATCTCA 7mer-A1 dme-bantam-3p 3R - 26872371 26872420 3'utr Rb97D FlyBase G41456.1 TCGTAAGGTAAGTTAGTAACGGATCTCATCTAGGATAAACTAGAGTTTTT 23 26872391 0.697244343 8 23 161 1 1.531478917 0.117647059 0.47826087 0.647058824 23 0 0 34 3R:26872371-26872420 7 28.5 4364 FBgn0004903 1478.54 66.86666667 102.46 0.019275772 0.426221336 0.27815733 -8 -8 -8 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 26872733 26872738 - 3R_26872733_26872738_- 0.999999981 1 0.99999999 0 Rb97D FBtr0100336|FBtr0100334|FBtr0085092|FBtr0085093|FBtr0100335|FBtr0100340|FBtr0100338|FBtr0100337 26872581|26872581|26872581|26872127|26872581|26872581|26872581|26872581 26873961|26873864|26873864|26873864|26873961|26873864|26873864|26873864 3R - 26872717 26872813 3'utr Rb97D FlyBase G54915.1 GGATTAACTAGACTTACGATTTATTCTCGACTCTCTCCTATTATTAAGCTGTTGTGCACGCCAAGGGCTTTGAATTGATCTTTATATATAATGCAGT 25 26872739 0.901085019 9 22 230 0.857142857 1.380211242 0.392857143 0.12 0.214285714 25 4 0 24 3R:26872717-26872813 6 Rb97D FBtr0100337|FBtr0100338|FBtr0100340|FBtr0100335|FBtr0085093|FBtr0085092|FBtr0100334|FBtr0100336 26872581|26872581|26872581|26872581|26872127|26872581|26872581|26872581 26873864|26873864|26873864|26873961|26873864|26873864|26873864|26873961 TGATCT 6mer3-8 dme-bantam-3p 3R - 26872712 26872768 3'utr Rb97D FlyBase G41457.1 AAGCTGTTGTGCACGCCAAGGGCTTTGAATTGATCTTTATATATAATGCAGTACTGA 27 26872739 0.767320575 8 23 247 0.789473684 1.176091259 0.263157895 0.259259259 0.473684211 27 7 1 30 3R:26872712-26872768 6 19 4365 FBgn0004903 1478.54 66.86666667 102.46 0.012850515 0.284147557 0.18543822 1 1 1 0.01 dme-miR-190-5p 6mer3-8 ACATAT 3R 26910995 26911000 - 3R_26910995_26911000_- 1 1 1 0 Ets97D FBtr0085088 26910773 26911111 3R - 26910995 26911064 stop_codon Ets97D FlyBase G54927.2 CGAGGAGCCTTAGCGTTGGCTGACTTGGTCGGATGACGGCGCCTGGTTAATAATACAAATTGTTACATAT 54 26911015 0.754751748 9 51 396 0.948275862 1.740362689 0.224137931 0.055555556 0.120689655 54 3 0 55 3R:26910995-26911064 5 Ets97D FBtr0330167|FBtr0085088 26910773|26910773 26911051|26911111 ACATAT 6mer3-8 dme-miR-190-5p 3R - 26910998 26911041 3'utr Ets97D FlyBase G41469.1 CTTGGTCGGATGACGGCGCCTGGTTAATAATACAAATTGTTACA 21 26911015 0.716738247 6 18 160 0.90625 0.985276743 0.0625 0.428571429 0.625 21 1 2 29 3R:26910998-26911041 2 4 4366 FBgn0004510 520.3433333 34.19 52.35333333 0.007687232 0.116993273 0.076403922 15 15 15 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 26944571 26944576 + 3R_26944571_26944576_+ 1 1 1 0 sda FBtr0085066|FBtr0112882|FBtr0336725|FBtr0305065 26944522|26944522|26944522|26944522 26945309|26945309|26945309|26945309 3R + 26944534 26944595 3'utr sda FlyBase G46109.1 GGAAGTTGGAAATGGGGGAGAACTCAAATTGATTTCAACCAAAAAATGCGATTTAGTTATTG 44 26944562 0.759332059 5 40 271 0.924528302 1.213074825 0.094339623 0.159090909 0.301886792 44 2 2 49 3R:26944534-26944595 6 sda FBtr0336725|FBtr0305065|FBtr0085066|FBtr0112882 26944522|26944522|26944522|26944522 26945309|26945309|26945309|26945309 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 26944537 26944590 3'utr sda FlyBase G34785.1 AGTTGGAAATGGGGGAGAACTCAAATTGATTTCAACCAAAAAATGCGATTTAGT 26 26944562 0.746393666 3 26 142 1 1.556302501 0.083333333 0.307692308 0.5 26 0 0 36 3R:26944537-26944590 6 34.5 4367 FBgn0015541 495.3333333 12.26 18.81 0.069650067 2.814029364 1.834130781 9 9 9 0.01 dme-miR-8-3p 6mer3-8 CAGTAT 3R 26950357 26950362 - 3R_26950357_26950362_- 1 1 1 0 CG6330 FBtr0085085|FBtr0085084 26950121|26949690 26950424|26950424 3R - 26950270 26950379 3'utr CG6330 FlyBase G54933.1 ATATGTGCGCATCTCTCCAGTATACAATGATGTTTCAACATTCCCTAGTTTAGCTCTGATTAAGTTCCTAGCTTTATTTCTGTGTATATCGCCCACAACCTCATCGGATA 19 26950352 0.78842745 9 17 135 0.961538462 1.397940009 0.153846154 0.315789474 0.5 19 1 0 25 3R:26950270-26950379 6 CG6330 FBtr0085085|FBtr0085084 26950121|26949690 26950424|26950424 CAGTAT 6mer3-8 dme-miR-8-3p 3R - 26950270 26950384 3'utr CG6330 FlyBase G41474.1 ACATTATATGTGCGCATCTCTCCAGTATACAATGATGTTTCAACATTCCCTAGTTTAGCTCTGATTAAGTTCCTAGCTTTATTTCTGTGTATATCGCCCACAACCTCATCGGATA 16 26950364 0.98081386 10 15 109 0.933333333 1.447158031 0.166666667 0.625 0.8 16 2 0 28 3R:26950270-26950384 6 9 4368 FBgn0039464 58.00333333 3.87 5.813333333 0.155163496 2.325581395 1.548165138 -10 2 -4 0.01 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 26961441 26961447 - 3R_26961441_26961447_- 0.823349541 0.823277228 0.823313384 5.11E-05 Tsp97E FBtr0344665|FBtr0336726|FBtr0344664|FBtr0273310 26961062|26961399|26961399|26961062 26962355|26962355|26963005|26963005 3R - 26961412 26961473 3'utr Tsp97E FlyBase G54943.1 ATTAGATAATATTCTCTGTATTCTGTGCTGTGATTGAAGTAAATATGATCTTTAAAACAACA 80 26961450 0.8333937 7 78 767 0.979591837 1.982271233 0.091836735 0.175 0.326530612 80 2 0 96 3R:26961412-26961473 7 Tsp97E FBtr0344664|FBtr0273310|FBtr0336726|FBtr0344665 26961399|26961062|26961399|26961062 26963005|26963005|26962355|26962355 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R - 26961416 26961475 3'utr Tsp97E FlyBase G41480.1 CCATTAGATAATATTCTCTGTATTCTGTGCTGTGATTGAAGTAAATATGATCTTTAAAAC 77 26961450 0.704298682 10 75 741 0.982142857 1.740362689 0.125 0.337662338 0.544642857 77 1 1 110 3R:26961416-26961475 7 72.5 4369 FBgn0039465 1547.256667 107.7333333 165.9533333 0.046857126 0.672957921 0.436869803 3 3 3 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 26961931 26961936 - 3R_26961931_26961936_- 1 1 1 0 Tsp97E FBtr0344665|FBtr0085082|FBtr0336726|FBtr0344664|FBtr0273310 26961062|26961723|26961399|26961399|26961062 26962355|26962355|26962355|26963005|26963005 3R - 26961891 26961952 3'utr Tsp97E FlyBase G54945.1 AAACATTTCAACAACCTGATCTTACTGTAGAACTAACAACCAGTCAACAATTGTAACTAGCA 25 26961936 0.986643653 4 21 179 0.866666667 0.716003344 0 0.16 0.3 25 0 4 26 3R:26961891-26961952 6 Tsp97E FBtr0344664|FBtr0273310|FBtr0085082|FBtr0336726|FBtr0344665 26961399|26961062|26961723|26961399|26961062 26963005|26963005|26962355|26962355|26962355 TGATCT 6mer3-8 dme-bantam-3p 3R - 26961913 26961957 3'utr Tsp97E FlyBase G41482.1 GAGACAAACATTTCAACAACCTGATCTTACTGTAGAACTAACAAC 20 26961936 0.7814658 5 18 133 0.90625 0.860338007 0.09375 0.4 0.625 20 0 3 29 3R:26961913-26961957 6 22 4370 FBgn0039465 1547.256667 107.7333333 165.9533333 0.014218714 0.204207921 0.132567388 0 0 0 0.01 dme-miR-304-5p 8mer-A1 TGAGATTA 3R 26962097 26962104 - 3R_26962097_26962104_- 0.625363359 0.625363359 0.625363359 0 Tsp97E FBtr0344665|FBtr0085082|FBtr0336726|FBtr0344664|FBtr0273310 26961062|26961723|26961399|26961399|26961062 26962355|26962355|26962355|26963005|26963005 3R - 26962078 26962130 3'utr Tsp97E FlyBase G54947.1 ATGTTATTTAATTACAAAACCTCCATTGAGATTATGTTTAGATGTAATAATGT 59 26962105 0.932759732 5 57 562 0.985294118 1.826074803 0.029411765 0.13559322 0.25 59 1 0 67 3R:26962078-26962130 8 Tsp97E FBtr0344664|FBtr0273310|FBtr0085082|FBtr0336726|FBtr0344665 26961399|26961062|26961723|26961399|26961062 26963005|26963005|26962355|26962355|26962355 TGAGATTA 8mer-A1 dme-miR-304-5p 3R - 26962014 26962121 3'utr Tsp97E FlyBase G41483.1 AATTACAAAACCTCCATTGAGATTATGTTTAGATGTAATAATGTAATCTAAGTTTAACCGTTTAAAAGTCCTTAGTTAGCTCTTAATGCCTTTCTTTGCAACTCGCAA 45 26962105 0.834999223 12 45 406 1 1.886490725 0.077922078 0.488888889 0.701298701 45 0 0 77 3R:26962014-26962121 8 47.5 4371 FBgn0039465 1547.256667 107.7333333 165.9533333 0.030699496 0.440903465 0.286225043 1 1 1 0.01 dme-miR-988-3p 6mer3-8 ACAAGG 3R 26962334 26962339 - 3R_26962334_26962339_- 0.971080411 0.999913141 0.985496776 0.020387798 Tsp97E FBtr0344665|FBtr0085082|FBtr0336726|FBtr0344664|FBtr0273310 26961062|26961723|26961399|26961399|26961062 26962355|26962355|26962355|26963005|26963005 3R - 26962163 26962360 3'utr Tsp97E FlyBase G54948.1 ATTGAACAGGCTGAAAATACAACAAGGAAGTGAAACATTTTAGTCAAAGGGACGAAGGCTGAATTTTAATTCTTACAATCGCGTTTCCTAACCAGAATCGAATCCAAACTGGAACAAAAGATTACTCTTAATAGAAGGAGAAGGAGATGGTGGAGGAGTTATACATGTGCTCAACGCTGCTGCTATTAAGGATAATTT 180 26962323 0.95074713 27 171 925 0.955882353 1.444936571 0.274509804 0.122222222 0.225490196 180 3 6 195 3R:26962163-26962360 6 Tsp97E FBtr0344664|FBtr0273310|FBtr0085082|FBtr0336726|FBtr0344665 26961399|26961062|26961723|26961399|26961062 26963005|26963005|26962355|26962355|26962355 ACAAGG 6mer3-8 dme-miR-988-3p 3R - 26962162 26962362 3'utr Tsp97E FlyBase G41484.1 ATATTGAACAGGCTGAAAATACAACAAGGAAGTGAAACATTTTAGTCAAAGGGACGAAGGCTGAATTTTAATTCTTACAATCGCGTTTCCTAACCAGAATCGAATCCAAACTGGAACAAAAGATTACTCTTAATAGAAGGAGAAGGAGATGGTGGAGGAGTTATACATGTGCTCAACGCTGCTGCTATTAAGGATAATTTT 118 26962323 0.968500672 27 106 588 0.909090909 1.425968732 0.221590909 0.36440678 0.573863636 118 11 5 160 3R:26962162-26962362 6 42 4372 FBgn0039465 1547.256667 107.7333333 165.9533333 0.027144818 0.389851485 0.253083196 -16 -16 -16 0.01 dme-miR-965-3p 7mer-m8 TACGCTT 3R 26977159 26977165 + 3R_26977159_26977165_+ 0.620204855 0.620204855 0.620204855 0 CG5521 FBtr0301134|FBtr0085069 26976544|26976544 26977878|26977878 3R + 26977135 26977180 3'utr CG5521 FlyBase G46133.1 TTTCTTTCCTTTTATGTCACATTTTACGCTTGGCCACAAGACGCAA 32 26977158 0.975931853 2 32 236 1 1.579783597 0.026315789 0.1875 0.315789474 32 0 0 38 3R:26977135-26977180 7 CG5521 FBtr0301134|FBtr0085069 26976544|26976544 26977878|26977878 TACGCTT 7mer-m8 dme-miR-965-3p 3R + 26977146 26977183 3'utr CG5521 FlyBase G34797.1 TTATGTCACATTTTACGCTTGGCCACAAGACGCAAATT 25 26977158 0.975116231 5 25 161 1 1.612783857 0.12195122 0.4 0.634146341 25 0 0 41 3R:26977146-26977183 7 28.5 4373 FBgn0039466 1133.8 17.58666667 26.86 0.025136708 1.620545868 1.061057334 1 1 1 0.01 dme-miR-1003-3p 6mer2-7 TGTGAG 3R 26977395 26977400 + 3R_26977395_26977400_+ 1 1 1 0 CG5521 FBtr0301134|FBtr0085069 26976544|26976544 26977878|26977878 3R + 26977353 26977416 3'utr CG5521 FlyBase G46135.1 TCCAAAACCCTATCAACTGTCGATGGCAATCGTCACTAGGAGTGTGAGTCTTAGAAAGGAAAAC 13 26977397 0.938369143 8 12 71 0.923076923 1.079181246 0.230769231 0 0 13 1 0 12 3R:26977353-26977416 6 CG5521 FBtr0301134|FBtr0085069 26976544|26976544 26977878|26977878 TGTGAG 6mer2-7 dme-miR-1003-3p 3R + 26977373 26977408 3'utr CG5521 FlyBase G34799.1 CGATGGCAATCGTCACTAGGAGTGTGAGTCTTAGAA 10 26977397 0.752140934 6 9 55 0.857142857 1.079181246 0.285714286 0.4 0.571428571 10 2 0 12 3R:26977373-26977408 6 7.5 4374 FBgn0039466 1133.8 17.58666667 26.86 0.006614923 0.426459439 0.279225614 -2 -2 -2 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3R 26985307 26985312 + 3R_26985307_26985312_+ 1 1 1 0 CG14253 FBtr0085072|FBtr0085073|FBtr0085071|FBtr0085070|FBtr0085074|FBtr0331701 26985256|26985256|26985256|26985256|26985256|26985256 26985706|26985706|26985706|26985706|26985706|26985706 3R + 26985277 26985326 3'utr CG14253 FlyBase G46142.1 ATCAGCAATCTCAGGTTTATTTTTATACGTTGTGTTAGTGTTTAGTATAT 6 26985311 0.996960673 4 4 55 0.857142857 0.77815125 0.285714286 0.166666667 0.285714286 6 1 0 6 3R:26985277-26985326 6 CG14253 FBtr0085070|FBtr0085071|FBtr0085073|FBtr0085072|FBtr0331701|FBtr0085074 26985256|26985256|26985256|26985256|26985256|26985256 26985706|26985706|26985706|26985706|26985706|26985706 TGTGTT 6mer3-8 dme-miR-317-3p 3R + 26985279 26985322 3'utr CG14253 FlyBase G34804.1 CAGCAATCTCAGGTTTATTTTTATACGTTGTGTTAGTGTTTAGT 5 26985311 0.989110198 3 4 41 0.9 0.653212514 0.3 0.6 0.8 5 0 1 9 3R:26985279-26985322 6 3.5 4375 FBgn0039467 5123.18 287.6366667 442.6666667 0.000683169 0.012168129 0.007906627 -4 -4 -4 0.01 dme-miR-12-5p 6mer2-7 ATACTC 3R 26985528 26985533 + 3R_26985528_26985533_+ 1 1 1 0 CG14253 FBtr0085072|FBtr0085073|FBtr0085071|FBtr0085070|FBtr0085074|FBtr0331701 26985256|26985256|26985256|26985256|26985256|26985256 26985706|26985706|26985706|26985706|26985706|26985706 3R + 26985519 26985605 3'utr CG14253 FlyBase G46144.1 TATTGTTGCATACTCTTGGGCTTATAAGTTCAATCTGAGCTTGAAATATGCCTGGTTAGGCCACATTGTCCAGTCGATTCCTTTGAC 17 26985535 0.985374742 10 16 148 0.913043478 1.322219295 0.173913043 0.294117647 0.47826087 17 2 0 21 3R:26985519-26985605 6 CG14253 FBtr0085070|FBtr0085071|FBtr0085073|FBtr0085072|FBtr0331701|FBtr0085074 26985256|26985256|26985256|26985256|26985256|26985256 26985706|26985706|26985706|26985706|26985706|26985706 ATACTC 6mer2-7 dme-miR-12-5p 3R + 26985507 26985586 3'utr CG14253 FlyBase G34806.1 CTACAATACCATTATTGTTGCATACTCTTGGGCTTATAAGTTCAATCTGAGCTTGAAATATGCCTGGTTAGGCCACATTG 16 26985534 0.941184812 9 15 145 0.954545455 1.322219295 0.136363636 0.3125 0.5 16 1 0 21 3R:26985507-26985586 6 7.5 4376 FBgn0039467 5123.18 287.6366667 442.6666667 0.001463935 0.026074562 0.016942771 -7 -6 -6.5 0.01 dme-miR-1007-3p 7mer-m8 TGAGCTT 3R 26985554 26985560 + 3R_26985554_26985560_+ 0.620203442 0.620203442 0.620203442 0 CG14253 FBtr0085072|FBtr0085073|FBtr0085071|FBtr0085070|FBtr0085074|FBtr0331701 26985256|26985256|26985256|26985256|26985256|26985256 26985706|26985706|26985706|26985706|26985706|26985706 3R + 26985519 26985605 3'utr CG14253 FlyBase G46144.1 TATTGTTGCATACTCTTGGGCTTATAAGTTCAATCTGAGCTTGAAATATGCCTGGTTAGGCCACATTGTCCAGTCGATTCCTTTGAC 17 26985535 0.985374742 10 16 148 0.913043478 1.322219295 0.173913043 0.294117647 0.47826087 17 2 0 21 3R:26985519-26985605 7 CG14253 FBtr0085070|FBtr0085071|FBtr0085073|FBtr0085072|FBtr0331701|FBtr0085074 26985256|26985256|26985256|26985256|26985256|26985256 26985706|26985706|26985706|26985706|26985706|26985706 TGAGCTT 7mer-m8 dme-miR-1007-3p 3R + 26985507 26985586 3'utr CG14253 FlyBase G34806.1 CTACAATACCATTATTGTTGCATACTCTTGGGCTTATAAGTTCAATCTGAGCTTGAAATATGCCTGGTTAGGCCACATTG 16 26985534 0.941184812 9 15 145 0.954545455 1.322219295 0.136363636 0.3125 0.5 16 1 0 21 3R:26985507-26985586 7 2.5 4377 FBgn0039467 5123.18 287.6366667 442.6666667 0.000487978 0.008691521 0.00564759 19 20 19.5 0.01 dme-miR-305-5p 6mer3-8 AGTACA 3R 27065002 27065007 - 3R_27065002_27065007_- 0.903117426 1 0.951558713 0.068506343 spz FBtr0114372|FBtr0112834 27064988|27064988 27065853|27065853 3R - 27064990 27065075 3'utr spz FlyBase G54968.1 AAGAAAGATAGAAATAACGATTTGAAAAATGTATGTTAAAAAAAGATAATGTATAATAAATGTATGCAAGTACATGCCAGCAAAGT 20 27065027 0.896865833 13 19 121 0.96 1.380211242 0.08 0.25 0.4 20 1 0 24 3R:27064990-27065075 6 spz FBtr0114372|FBtr0112834 27064988|27064988 27065853|27065853 AGTACA 6mer3-8 dme-miR-305-5p 3R - 27064992 27065074 3'utr spz FlyBase G41496.1 AGAAAGATAGAAATAACGATTTGAAAAATGTATGTTAAAAAAAGATAATGTATAATAAATGTATGCAAGTACATGCCAGCAAA 13 27065027 0.956480641 8 11 67 0.8125 1.113943352 0 0.230769231 0.375 13 3 0 13 3R:27064992-27065074 6 7 4378 FBgn0003495 2700.523333 165.5533333 254.8866667 0.00259209 0.042282447 0.027463186 20 20 20 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 3R 27065047 27065052 - 3R_27065047_27065052_- 1 1 1 0 spz FBtr0114372|FBtr0112834 27064988|27064988 27065853|27065853 3R - 27064990 27065075 3'utr spz FlyBase G54968.1 AAGAAAGATAGAAATAACGATTTGAAAAATGTATGTTAAAAAAAGATAATGTATAATAAATGTATGCAAGTACATGCCAGCAAAGT 20 27065054 0.896865833 13 19 121 0.96 1.380211242 0.08 0.25 0.4 20 1 0 24 3R:27064990-27065075 6 spz FBtr0114372|FBtr0112834 27064988|27064988 27065853|27065853 GAAAAA 6mer3-8 dme-miR-980-5p 3R - 27064992 27065074 3'utr spz FlyBase G41496.1 AGAAAGATAGAAATAACGATTTGAAAAATGTATGTTAAAAAAAGATAATGTATAATAAATGTATGCAAGTACATGCCAGCAAA 13 27065027 0.956480641 8 11 67 0.8125 1.113943352 0 0.230769231 0.375 13 3 0 13 3R:27064992-27065074 6 7 4379 FBgn0003495 2700.523333 165.5533333 254.8866667 0.00259209 0.042282447 0.027463186 2 -25 -11.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 27065808 27065814 - 3R_27065808_27065814_- 0.533742331 0.705197273 0.619469802 0.121236993 spz FBtr0114372|FBtr0114372|FBtr0114372|FBtr0112834|FBtr0112834|FBtr0112834 27064988|27064988|27064988|27064988|27064988|27064988 27065853|27065853|27065853|27065853|27065853|27065853 3R - 27065780 27065931 stop_codon spz FlyBase G54971.1 AGTGATGGCGAACTGGACGTGGTGCAGAATTCCTTCAAGATCCCTTCCTGCTGCAAGTGCGCGTTGAAGACTGGGTGATTCTGGAAAATGGGATTCTCCAGTCGATGGCTGCGACAATGTGATATTGAGGTGAGGCCACGATTTATTCGTAC 643 27065826 0.976300899 25 616 3948 0.950904393 1.662757832 0.288113695 0.161741835 0.303617571 643 23 15 736 3R:27065780-27065931 7 spz FBtr0114372|FBtr0114372|FBtr0114372|FBtr0085137|FBtr0085137|FBtr0085137|FBtr0085138|FBtr0085138|FBtr0085138|FBtr0085145|FBtr0085145|FBtr0085145|FBtr0085140|FBtr0085140|FBtr0085140|FBtr0085146|FBtr0085146|FBtr0085146|FBtr0112834|FBtr0112834|FBtr0112834|FBtr0085139|FBtr0085139|FBtr0085139 27064988|27064988|27064988|27065086|27065086|27065086|27065086|27065086|27065086|27065086|27065086|27065086|27065086|27065086|27065086|27065086|27065086|27065086|27064988|27064988|27064988|27065086|27065086|27065086 27065853|27065853|27065853|27065853|27065853|27065853|27065853|27065853|27065853|27065853|27065853|27065853|27065853|27065853|27065853|27065853|27065853|27065853|27065853|27065853|27065853|27065853|27065853|27065853 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 27065792 27065883 stop_codon spz FlyBase G41500.1 TGCTGCAAGTGCGCGTTGAAGACTGGGTGATTCTGGAAAATGGGATTCTCCAGTCGATGGCTGCGACAATGTGATATTGAGGTGAGGCCACG 458 27065826 0.851919049 19 428 2742 0.949567723 1.915795428 0.282420749 0.366812227 0.582132565 458 28 7 659 3R:27065792-27065883 7 364.5 4380 FBgn0003495 2700.523333 165.5533333 254.8866667 0.134973838 2.201707405 1.430047341 12 12 12 0.01 dme-miR-277-3p 6mer3-8 TGCATT 3R 27108505 27108510 - 3R_27108505_27108510_- 1 1 1 0 gb FBtr0345216|FBtr0085132 27108465|27108465 27108996|27108996 3R - 27108482 27108614 3'utr gb FlyBase G55019.1 AGGTCGATATTTGCCATATAAAGCAGTTTCATATAATCTTCTGTTGCTTATTGTTTAAAAATTCGGTTATTGTTTTTGTCCCTCATTTTACTACCTAAGTGCATTGCATTGCAGTTTGTAATAAAGATTTTTG 22 27108511 0.964346814 11 20 213 0.888888889 1.380211242 0.148148148 0.181818182 0.333333333 22 3 0 24 3R:27108482-27108614 6 gb FBtr0345216|FBtr0085132 27108465|27108465 27108996|27108996 TGCATT 6mer3-8 dme-miR-277-3p 3R - 27108488 27108544 3'utr gb FlyBase G41542.1 TGTTTTTGTCCCTCATTTTACTACCTAAGTGCATTGCATTGCAGTTTGTAATAAAGA 10 27108511 0.81312508 6 10 93 1 1.079181246 0.166666667 0.2 0.333333333 10 0 0 12 3R:27108488-27108544 6 6.5 4381 FBgn0039487 624.3633333 28.60666667 43.79 0.010410605 0.227219762 0.148435716 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 27108858 27108863 - 3R_27108858_27108863_- 1 1 1 0 gb FBtr0345216|FBtr0085132 27108465|27108465 27108996|27108996 3R - 27108779 27108899 3'utr gb FlyBase G55021.1 TTGAGAACGAGAAAGCTTGGCTCGTTAAACCTGAATACCAAAAAACGAAAATACCTAAAAAAGCGGAAAACATGACCTGTACATCACAAGGACTGGAGAACGAAGTCAATACTATCATATT 146 27108864 0.939424342 17 122 426 0.938547486 1.748188027 0.117318436 0.179310345 0.335195531 145 9 2 168 3R:27108779-27108899 6 gb FBtr0345216|FBtr0085132 27108465|27108465 27108996|27108996 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 27108779 27108967 3'utr gb FlyBase G41545.1 TTCAAAACGATCTAGCTATTTGGCCCTCCAAATAACTACCTATTAAATCTCTATATTGATGTGAAAGCTTGAGAACGAGAAAGCTTGGCTCGTTAAACCTGAATACCAAAAAACGAAAATACCTAAAAAAGCGGAAAACATGACCTGTACATCACAAGGACTGGAGAACGAAGTCAATACTATCATATT 104 27108864 0.943150634 26 97 403 0.933333333 2.146128036 0.193333333 0.355769231 0.553333333 104 10 0 140 3R:27108779-27108967 6 67.5 4382 FBgn0039487 624.3633333 28.60666667 43.79 0.108110128 2.359589839 1.541447819 1 1 1 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 27114831 27114836 + 3R_27114831_27114836_+ 0.991717205 0.859919142 0.925818174 0.09319533 CG5815 FBtr0339262|FBtr0085106 27114631|27114631 27115126|27115126 3R + 27114809 27114850 3'utr CG5815 FlyBase G46153.1 GTGCACAGGAAGAAGCGAATTCTGATGAAGATTGGTTTGCTG 7 27114840 0.97487744 4 7 44 1 0.954242509 0.444444444 0.285714286 0.444444444 7 0 0 9 3R:27114809-27114850 6 CG5815 FBtr0339262|FBtr0085106 27114631|27114631 27115126|27115126 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R + 27114798 27114850 3'utr CG5815 FlyBase G34811.1 AAACCAGAGAAGTGCACAGGAAGAAGCGAATTCTGATGAAGATTGGTTTGCTG 7 27114840 0.949350225 4 7 36 1 1.041392685 0.545454545 0.285714286 0.545454545 7 0 0 11 3R:27114798-27114850 6 6.5 4383 FBgn0027574 396.19 21.08 32.38333333 0.01640627 0.308349146 0.200720535 -9 -9 -9 0.01 dme-miR-965-3p 6mer2-7 ACGCTT 3R 27118486 27118491 + 3R_27118486_27118491_+ 1 1 1 0 CG5880 FBtr0085108 27118289 27118532 3R + 27118453 27118501 3'utr CG5880 FlyBase G46159.1 TTGTTTCCATGACGACTAGGACTAGGCACAATGACGCTTTTATACTACT 58 27118492 0.636881498 6 56 371 0.942857143 1.217483944 0 0.103448276 0.257142857 58 1 3 66 3R:27118453-27118501 6 CG5880 FBtr0085108 27118289 27118532 ACGCTT 6mer2-7 dme-miR-965-3p 3R + 27118453 27118509 3'utr CG5880 FlyBase G34816.1 TTGTTTCCATGACGACTAGGACTAGGCACAATGACGCTTTTATACTACTACTAGCTT 42 27118492 0.758240575 7 40 277 0.956521739 1.819543936 0 0.404761905 0.637681159 42 3 0 66 3R:27118453-27118509 6 48 4384 FBgn0039489 95.00666667 7.643333333 11.70333333 0.505227703 6.279982556 4.101395614 -6 -6 -6 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3R 27125025 27125031 - 3R_27125025_27125031_- 0.521223855 0.521223855 0.521223855 0 CG6051 FBtr0305050|FBtr0339264 27124757|27124757 27125642|27125642 3R - 27125004 27125049 3'utr CG6051 FlyBase G55035.1 TTTTTGCGAAACATTTTTTGTGATTTATCGTAATTTTATATGTATT 71 27125025 0.635087439 10 69 829 0.978723404 1.662757832 0.361702128 0.267605634 0.446808511 71 1 1 92 3R:27125004-27125049 7 CG6051 FBtr0339264|FBtr0305050 27124757|27124757 27125642|27125642 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 27124989 27125094 3'utr CG6051 FlyBase G41560.1 ATTGCGCGATCAAGCTGATTTAGTAGGCGTTAACTGTAGCAGAAATTTTTGCGAAACATTTTTTGTGATTTATCGTAATTTTATATGTATTAATTCGCTTATGTTA 47 27125025 0.992890002 11 45 519 0.970588235 1.51851394 0.308823529 0.319148936 0.529411765 47 1 1 66 3R:27124989-27125094 7 55.5 4385 FBgn0039492 806.82 24.12 36.87 0.068788577 2.300995025 1.505288853 -6 -6 -6 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 27125569 27125574 - 3R_27125569_27125574_- 1 1 1 0 CG6051 FBtr0305050|FBtr0305050|FBtr0305050|FBtr0339264|FBtr0339264|FBtr0339264|FBtr0113297|FBtr0113297|FBtr0113297 27124757|27124757|27124757|27124757|27124757|27124757|27125436|27125436|27125436 27125642|27125642|27125642|27125642|27125642|27125642|27125642|27125642|27125642 3R - 27125529 27125599 3'utr CG6051 FlyBase G55037.1 GTGGCCGCGATGGAGGAAAAGCAAACTGTGAATCGCAATTGTTCCGCAAACATTGTTTTCTTTATTTTATA 45 27125567 0.845257333 10 44 198 0.98 1.69019608 0.4 0.111111111 0.2 45 1 0 49 3R:27125529-27125599 6 CG6051 FBtr0339264|FBtr0339264|FBtr0339264|FBtr0113297|FBtr0113297|FBtr0113297|FBtr0305050|FBtr0305050|FBtr0305050 27124757|27124757|27124757|27125436|27125436|27125436|27124757|27124757|27124757 27125642|27125642|27125642|27125642|27125642|27125642|27125642|27125642|27125642 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 27125530 27125619 3'utr CG6051 FlyBase G41561.1 CGCAGCTGACGACCAAAAATGTGGCCGCGATGGAGGAAAAGCAAACTGTGAATCGCAATTGTTCCGCAAACATTGTTTTCTTTATTTTAT 33 27125567 0.932687329 9 31 118 0.893617021 1.62324929 0.446808511 0.303030303 0.510638298 33 5 0 42 3R:27125530-27125619 6 34 4386 FBgn0039492 806.82 24.12 36.87 0.04214075 1.409618574 0.922158937 -7 -7 -7 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 27156744 27156750 + 3R_27156744_27156750_+ 0.801970437 0.801970437 0.801970437 0 Men-b FBtr0085110|FBtr0085110|FBtr0085110 27156373|27156373|27156373 27157603|27157603|27157603 3R + 27156721 27156769 3'utr Men-b FlyBase G46176.1 AAAAATTATCATGTTATTAATTTTGTGATACCGAAACGTACGATACTAA 27 27156742 0.8680529 5 24 244 0.909090909 0.875061263 0.181818182 0.148148148 0.303030303 27 0 3 30 3R:27156721-27156769 7 Men-b FBtr0085110|FBtr0085110|FBtr0085110 27156373|27156373|27156373 27157603|27157603|27157603 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 27156709 27156846 3'utr Men-b FlyBase G34826.1 TTTTATATATGTAAAAATTATCATGTTATTAATTTTGTGATACCGAAACGTACGATACTAAATGACGACATTGACATGACGACTGTGACGGTGACTACGCCTTCGAAAAAGCAATTACGCAGTATTCTATTCTATCCT 29 27156742 0.987137413 15 26 228 0.875 0.942008053 0.075 0.310344828 0.5 29 2 3 35 3R:27156709-27156846 7 20.5 4387 FBgn0029155 3172.966667 116.5433333 178.2166667 0.006460831 0.175900237 0.115028523 2 2 2 0.01 dme-miR-8-3p 7mer-m8 CAGTATT 3R 27156828 27156834 + 3R_27156828_27156834_+ 0.661615243 0.661615243 0.661615243 0 Men-b FBtr0085110 27156373 27157603 3R + 27156770 27156894 3'utr Men-b FlyBase G46177.1 ATGACGACATTGACATGACGACTGTGACGGTGACTACGCCTTCGAAAAAGCAATTACGCAGTATTCTATTCTATCCTATCACTATCCTATCTGTATTTAATCTATGCTATGTTTATGGTTTGCTG 15 27156823 0.97469642 9 14 91 1 1.204119983 0.1875 0.066666667 0.125 15 0 0 16 3R:27156770-27156894 7 Men-b FBtr0085110 27156373 27157603 CAGTATT 7mer-m8 dme-miR-8-3p 3R + 27156709 27156846 3'utr Men-b FlyBase G34826.1 TTTTATATATGTAAAAATTATCATGTTATTAATTTTGTGATACCGAAACGTACGATACTAAATGACGACATTGACATGACGACTGTGACGGTGACTACGCCTTCGAAAAAGCAATTACGCAGTATTCTATTCTATCCT 29 27156836 0.987137413 15 26 228 0.875 0.942008053 0.075 0.310344828 0.5 29 2 3 35 3R:27156709-27156846 7 7.5 4388 FBgn0029155 3172.966667 116.5433333 178.2166667 0.002363718 0.064353745 0.042083606 5 -8 -1.5 0.01 dme-miR-980-3p 6mer2-7 GCAGCT 3R 27157450 27157455 + 3R_27157450_27157455_+ 0.996753983 0.999867844 0.998310913 0.002201789 Men-b FBtr0301708|FBtr0085110 27157162|27156373 27157603|27157603 3R + 27157436 27157474 3'utr Men-b FlyBase G46179.1 ATTAACGCAATTAAGCAGCTTTGTTATAATTTATTGTTA 10 27157457 0.619581124 5 9 80 0.933333333 0.84509804 0 0.5 0.666666667 10 0 1 14 3R:27157436-27157474 6 Men-b FBtr0085110|FBtr0301708 27156373|27157162 27157603|27157603 GCAGCT 6mer2-7 dme-miR-980-3p 3R + 27157434 27157478 3'utr Men-b FlyBase G34827.1 TTATTAACGCAATTAAGCAGCTTTGTTATAATTTATTGTTAAAAG 6 27157456 0.976406744 5 5 41 1 0.84509804 0.428571429 0.4 0.571428571 5 0 0 7 3R:27157434-27157478 6 7 4389 FBgn0029155 3172.966667 116.5433333 178.2166667 0.002206137 0.060063496 0.039278032 -7 -6 -6.5 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 27172376 27172381 - 3R_27172376_27172381_- 0.99999971 0.999998365 0.999999038 9.19E-07 Ser FBtr0085128|FBtr0344121 27172088|27172088 27172990|27172990 3R - 27172372 27172427 3'utr Ser FlyBase G55056.1 TGTATATAGTTCTCATTTAGGATCGTCGCGCTCTATATTGTGTATAAGCTGTAAAT 18 27172390 0.715436033 9 17 144 0.958333333 1.361727836 0.25 0.222222222 0.416666667 18 1 0 23 3R:27172372-27172427 6 Ser FBtr0085128|FBtr0344121 27172088|27172088 27172990|27172990 AGCTGT 6mer3-8 dme-miR-1008-3p 3R - 27172320 27172426 3'utr Ser FlyBase G41571.1 GTATATAGTTCTCATTTAGGATCGTCGCGCTCTATATTGTGTATAAGCTGTAAATACTGTAAATTAGCAGTTACCGTTATTGTATTTTGTCTATAGTTAGATTGGTA 46 27172391 0.730521557 15 45 457 0.985915493 1.84509804 0.267605634 0.413043478 0.61971831 46 1 0 70 3R:27172320-27172426 6 10 4390 FBgn0004197 511.3333333 10.63 16.37666667 0.019556714 0.940733772 0.610624873 9 10 9.5 0.01 dme-miR-283-5p 8mer-m1 TGATATTT 3R 27172513 27172520 - 3R_27172513_27172520_- 0.555593841 0.555593841 0.555593841 0 Ser FBtr0085128|FBtr0344121 27172088|27172088 27172990|27172990 3R - 27172485 27172581 3'utr Ser FlyBase G55057.1 ATTTAAGTTAGATAGTGTAATTCCGAACTCTTCTCTTCGCTAAGCAACATCCTACACAGTGTGATATTTAGTGTAACCCAGGCGCGCATTTACATTC 93 27172514 0.668737143 14 88 691 0.954954955 2.025305865 0.063063063 0.161290323 0.297297297 93 5 0 106 3R:27172485-27172581 8 Ser FBtr0085128|FBtr0344121 27172088|27172088 27172990|27172990 TGATATTT 8mer-m1 dme-miR-283-5p 3R - 27172483 27172612 3'utr Ser FlyBase G41572.1 GCAGTGCCATGTCGATGTGGAAGCCCAAAATATTTAAGTTAGATAGTGTAATTCCGAACTCTTCTCTTCGCTAAGCAACATCCTACACAGTGTGATATTTAGTGTAACCCAGGCGCGCATTTACATTCAT 84 27172514 0.985359712 16 78 630 0.95620438 1.8162413 0.072992701 0.404761905 0.635036496 84 5 1 131 3R:27172483-27172612 8 65.5 4391 FBgn0004197 511.3333333 10.63 16.37666667 0.12809648 6.161806209 3.999592917 -6 -6 -6 0.01 dme-miR-276a-3p 6mer3-8 AGTTCC 3R 27172927 27172932 - 3R_27172927_27172932_- 1 1 1 0 Ser FBtr0085128|FBtr0344121 27172088|27172088 27172990|27172990 3R - 27172840 27172957 3'utr Ser FlyBase G55061.1 AACCAGCCGCCCACAGCCAGCTCAAAGTTCCAATTGCCACAGCACGGGCGCTATTTCCAAGTGCATTAGTAGCGTAATTAAAACTAGGATATTGTTAAGGATACCAAGGTAGGCCACA 38 27172923 0.958965659 13 37 180 0.976190476 1.311753861 0.023809524 0.105263158 0.19047619 38 0 1 41 3R:27172840-27172957 6 Ser FBtr0085128|FBtr0344121 27172088|27172088 27172990|27172990 AGTTCC 6mer3-8 dme-miR-276a-3p 3R - 27172870 27172950 3'utr Ser FlyBase G41574.1 CGCCCACAGCCAGCTCAAAGTTCCAATTGCCACAGCACGGGCGCTATTTCCAAGTGCATTAGTAGCGTAATTAAAACTAGG 20 27172924 0.951459693 6 17 83 0.888888889 1.380211242 0 0.35 0.518518519 20 3 0 24 3R:27172870-27172950 6 18.5 4392 FBgn0004197 511.3333333 10.63 16.37666667 0.036179922 1.740357479 1.129656015 -9 -8 -8.5 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 27242373 27242378 - 3R_27242373_27242378_- 1 1 1 0 CG18766 FBtr0333327|FBtr0085122|FBtr0085123 27242333|27242333|27242333 27242709|27242709|27242709 3R - 27242365 27242489 3'utr CG18766 FlyBase G55085.1 CGATCGCGCCCTCGATACAGAGTTGACTTCCGTAAAGAGGGGGCTGGATCGATCAATCGTGCATAGAGATCCTAGGGAGTACATTACATTTAGACACCATTTCCTACTGTTAGCTGTAAACTATT 64 27242389 0.828264264 17 58 498 0.935897436 1.562292864 0.141025641 0.1875 0.333333333 64 4 1 73 3R:27242365-27242489 6 CG18766 FBtr0085123|FBtr0085122|FBtr0333327 27242333|27242333|27242333 27242709|27242709|27242709 AGCTGT 6mer3-8 dme-miR-1008-3p 3R - 27242359 27242452 3'utr CG18766 FlyBase G41586.1 AGGGGGCTGGATCGATCAATCGTGCATAGAGATCCTAGGGAGTACATTACATTTAGACACCATTTCCTACTGTTAGCTGTAAACTATTATGCAT 40 27242389 0.862003502 10 38 310 0.98 1.69019608 0.22 0.2 0.36 40 1 0 49 3R:27242359-27242452 6 36 4393 FBgn0042111 927.4033333 71.10333333 109.1233333 0.038818062 0.506305377 0.329901946 11 11 11 0.01 dme-miR-8-3p 7mer-m8 CAGTATT 3R 27242531 27242537 - 3R_27242531_27242537_- 0.661615243 0.661615243 0.661615243 0 CG18766 FBtr0333327|FBtr0085122|FBtr0085123 27242333|27242333|27242333 27242709|27242709|27242709 3R - 27242490 27242549 3'utr CG18766 FlyBase G55085.2 ACACACGGCATACAGTATTTTTTGTATAGTTAAAATATACATTGGAGTTTTAGTTCTCGA 58 27242539 0.907122899 11 53 523 0.925373134 1.315270435 0 0.155172414 0.268656716 58 3 2 62 3R:27242490-27242549 7 CG18766 FBtr0085123|FBtr0085122|FBtr0333327 27242333|27242333|27242333 27242709|27242709|27242709 CAGTATT 7mer-m8 dme-miR-8-3p 3R - 27242476 27242548 3'utr CG18766 FlyBase G41587.1 CACACGGCATACAGTATTTTTTGTATAGTTAAAATATACATTGGAGTTTTAGTTCTCGACGATCGCGCCCTCG 27 27242529 0.990119859 7 25 250 0.925 1.568201724 0.05 0.333333333 0.55 27 3 0 37 3R:27242476-27242548 7 36 4394 FBgn0042111 927.4033333 71.10333333 109.1233333 0.038818062 0.506305377 0.329901946 2 -8 -3 0.01 dme-miR-970-3p 6mer3-8 TCTTAT 3R 27256336 27256341 + 3R_27256336_27256341_+ 1 1 1 0 TfIIA-L FBtr0085156|FBtr0085155|FBtr0085154 27256140|27256140|27256140 27256463|27256463|27256463 3R + 27256314 27256423 3'utr TfIIA-L FlyBase G46196.1 ACGTACTCGGGCCGACACTGTATCTTATTTTAGTTCCATCTGTTTTGTATTACGATAGCTTAAGGGTGTGTTGCAACCAACCATCTCGATTAAATGTATTAGAGTGCCGC 19 27256336 0.982208629 10 18 141 1 1.322219295 0.238095238 0.105263158 0.19047619 19 0 0 21 3R:27256314-27256423 6 TfIIA-L FBtr0085154|FBtr0085155|FBtr0085156 27256140|27256140|27256140 27256463|27256463|27256463 TCTTAT 6mer3-8 dme-miR-970-3p 3R + 27256310 27256346 3'utr TfIIA-L FlyBase G34842.1 AGCAACGTACTCGGGCCGACACTGTATCTTATTTTAG 9 27256333 0.783779911 6 9 56 1 1.255272505 0.166666667 0.333333333 0.666666667 9 0 0 18 3R:27256310-27256346 6 8.5 4395 FBgn0011289 653.3333333 54.7 83.7 0.013010204 0.155393053 0.101553166 0 3 1.5 0.01 dme-miR-252-5p 7mer-m1 TACTTAG 3R 27256866 27256872 - 3R_27256866_27256872_- 0.702971752 0.702971752 0.702971752 0 woc FBtr0085178|FBtr0334730|FBtr0112857|FBtr0334731 27256593|27256593|27256593|27256593 27257305|27257305|27257305|27257305 3R - 27256738 27256941 3'utr woc FlyBase G55097.1 ACGCGAGACATTTTCATTAGTTTTAGGATGGTAAGATCGTAAGCCAGACAACCAGGCATCTTTAGTCATTACTTAGATTGTTTAGGCGATAAGACATAAGCCAAGTGCGATGTGGTGCCCGACCGGATAAGCGGATGCGGATGCGGATAAGTGCATGTATGTATGTACATAGATTGACGATGGATGACCAGATTCCCGTGTACA 101 27256880 0.969997939 21 95 547 0.959016393 1.591064607 0.12295082 0.168316832 0.31147541 101 3 2 117 3R:27256738-27256941 7 woc FBtr0112857|FBtr0334731|FBtr0085178|FBtr0334730 27256593|27256593|27256593|27256593 27257305|27257305|27257305|27257305 TACTTAG 7mer-m1 dme-miR-252-5p 3R - 27256854 27256939 3'utr woc FlyBase G41594.2 GCGAGACATTTTCATTAGTTTTAGGATGGTAAGATCGTAAGCCAGACAACCAGGCATCTTTAGTCATTACTTAGATTGTTTAGGCG 69 27256880 0.961925615 11 61 381 0.898989899 1.949390007 0.111111111 0.289855072 0.505050505 69 10 0 89 3R:27256854-27256939 7 23 4396 FBgn0010328 3628.043333 70.90333333 108.5766667 0.006339505 0.324385313 0.211831885 8 8 8 0.01 dme-miR-1012-3p 8mer-A1 TTGACTAA 3R 27257031 27257038 - 3R_27257031_27257038_- 0.627007348 0.627007348 0.627007348 0 woc FBtr0085178|FBtr0334730|FBtr0112857|FBtr0334731 27256593|27256593|27256593|27256593 27257305|27257305|27257305|27257305 3R - 27256966 27257130 5'utr-coding woc FlyBase G55098.1 ACGCATATTTCGATTGTCTCTAGTTGCGATAACGCTGATGGAGGTGACCTTGTATAAAATGTGAACGCCAACCAAGCACATCTCACTTTCGATTGACTAAACTTAATCTAGGAATCAAAAAAATCCAAGCAGCAATATACACAACTAAACTTAACACCCACTCAC 44 27257038 0.898756544 18 41 267 0.957446809 1.352182518 0.234042553 0.068181818 0.127659574 44 1 1 45 3R:27256966-27257130 8 woc FBtr0112857|FBtr0334731|FBtr0085178|FBtr0334730 27256593|27256593|27256593|27256593 27257305|27257305|27257305|27257305 TTGACTAA 8mer-A1 dme-miR-1012-3p 3R - 27256964 27257130 5'utr-coding woc FlyBase G41595.1 ACGCATATTTCGATTGTCTCTAGTTGCGATAACGCTGATGGAGGTGACCTTGTATAAAATGTGAACGCCAACCAAGCACATCTCACTTTCGATTGACTAAACTTAATCTAGGAATCAAAAAAATCCAAGCAGCAATATACACAACTAAACTTAACACCCACTCACAT 31 27257038 0.977449356 15 31 200 1 1.672097858 0.085106383 0.419354839 0.617021277 31 0 0 47 3R:27256964-27257130 8 14 4397 FBgn0010328 3628.043333 70.90333333 108.5766667 0.003858829 0.19745193 0.128941148 0 0 0 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 27257190 27257195 - 3R_27257190_27257195_- 1 1 1 0 woc FBtr0085178|FBtr0334730|FBtr0112857|FBtr0334731 27256593|27256593|27256593|27256593 27257305|27257305|27257305|27257305 3R - 27257161 27257240 5'utr woc FlyBase G55099.1 CGATTCTTCGGCTTGGTGCTTAGCACATGTTTGTTTGCGGGCAAAACCAAATTGGACTAACCAAGGAGCGAGAGTTGTGC 68 27257188 0.805394783 7 64 284 0.973684211 1.86923172 0.197368421 0.102941176 0.197368421 68 2 0 74 3R:27257161-27257240 6 woc FBtr0112857|FBtr0334731|FBtr0085178|FBtr0334730 27256593|27256593|27256593|27256593 27257305|27257305|27257305|27257305 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 27257139 27257239 5'utr woc FlyBase G41596.1 GATTCTTCGGCTTGGTGCTTAGCACATGTTTGTTTGCGGGCAAAACCAAATTGGACTAACCAAGGAGCGAGAGTTGTGCTATATTATAAATTGTTTTAAAC 42 27257188 0.96042211 8 40 169 1 1.77815125 0.4 0.390243902 0.583333333 41 0 0 60 3R:27257139-27257239 6 40.5 4398 FBgn0010328 3628.043333 70.90333333 108.5766667 0.011163042 0.571200226 0.37300832 -7 -7 -7 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3R 27277338 27277343 - 3R_27277338_27277343_- 1 1 1 0 mrt FBtr0305972|FBtr0085174|FBtr0305971|FBtr0305974|FBtr0305975|FBtr0305973 27277247|27277247|27277247|27277247|27277247|27277247 27277589|27277589|27277589|27277589|27277589|27277589 3R - 27277326 27277374 3'utr mrt FlyBase G55150.1 ATGTATTTATTGTTCATCAACCGTCTATGCCCCAAAGTGCTGTAAAGTT 155 27277347 0.909883147 6 151 983 0.978021978 1.773298748 0.17032967 0.141935484 0.269230769 155 2 2 178 3R:27277326-27277374 6 mrt FBtr0305975|FBtr0305973|FBtr0305971|FBtr0305974|FBtr0305972|FBtr0085174 27277247|27277247|27277247|27277247|27277247|27277247 27277589|27277589|27277589|27277589|27277589|27277589 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 27277325 27277377 3'utr mrt FlyBase G41634.1 AAAATGTATTTATTGTTCATCAACCGTCTATGCCCCAAAGTGCTGTAAAGTTA 121 27277347 0.911576184 5 113 790 0.938888889 1.324796718 0.211111111 0.314049587 0.538888889 121 4 7 169 3R:27277325-27277377 6 132.5 4399 FBgn0039507 449.7733333 19.81666667 30.52666667 0.294592832 6.686291001 4.340467351 4 4 4 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3R 27277424 27277429 - 3R_27277424_27277429_- 1 1 1 0 mrt FBtr0305972|FBtr0085174|FBtr0305971|FBtr0305974|FBtr0305975|FBtr0305973 27277247|27277247|27277247|27277247|27277247|27277247 27277589|27277589|27277589|27277589|27277589|27277589 3R - 27277394 27277467 3'utr mrt FlyBase G55151.1 ATATATATATTCCTAGAGCCAGACCCGCGCATTGTTAAAAGACTTGATTATATTTAAGCATTAATACATAAATG 90 27277421 0.960337608 13 80 707 0.897196262 1.505149978 0.242990654 0.155555556 0.289719626 90 9 2 96 3R:27277394-27277467 6 mrt FBtr0305975|FBtr0305973|FBtr0305971|FBtr0305974|FBtr0305972|FBtr0085174 27277247|27277247|27277247|27277247|27277247|27277247 27277589|27277589|27277589|27277589|27277589|27277589 AAGACT 6mer3-8 dme-miR-14-3p 3R - 27277383 27277469 3'utr mrt FlyBase G41635.1 ATATATATATATTCCTAGAGCCAGACCCGCGCATTGTTAAAAGACTTGATTATATTTAAGCATTAATACATAAATGAAACCTAAAGT 67 27277421 0.989928223 11 58 572 0.901098901 1.311753861 0.428571429 0.208955224 0.417582418 67 6 3 82 3R:27277383-27277469 6 66 4400 FBgn0039507 449.7733333 19.81666667 30.52666667 0.14674058 3.330529857 2.162044114 -8 -8 -8 0.01 dme-miR-970-3p 6mer3-8 TCTTAT 3R 27291555 27291560 + 3R_27291555_27291560_+ 1 1 1 0 Hmu FBtr0085164 27291132 27291592 3R + 27291460 27291627 3'utr Hmu FlyBase G46239.1 CAACCGGAAGTGCATTCCATGTAGCTAAGTTAATAGTAAACAATGCCCCAAAATTGTTAAACTCGAGCAACTTTTGATTTTGTACTGATTTTTTTTCTTATTTTCATTAAAAATAAAGGTATTTTGTAAAAATAGACGTAAGCCTAATGAGGTTGGTTGTCTTAGACT 40 27291538 0.995146089 17 40 402 1 1.662757832 0.173913043 0.125 0.239130435 40 0 0 46 3R:27291460-27291627 6 Hmu FBtr0085164 27291132 27291592 TCTTAT 6mer3-8 dme-miR-970-3p 3R + 27291463 27291573 3'utr Hmu FlyBase G34884.1 CCGGAAGTGCATTCCATGTAGCTAAGTTAATAGTAAACAATGCCCCAAAATTGTTAAACTCGAGCAACTTTTGATTTTGTACTGATTTTTTTTCTTATTTTCATTAAAAAT 28 27291538 0.96009831 14 26 290 0.975609756 1.602059991 0.048780488 0.321428571 0.536585366 28 1 0 40 3R:27291463-27291573 6 7.5 4401 FBgn0015737 809.6633333 41.37666667 63.14 0.009263109 0.181261581 0.118783655 17 17 17 0.01 dme-miR-283-5p 7mer-m8 TGATATT 3R 27547944 27547950 - 3R_27547944_27547950_- 0.620203677 0.620203677 0.620203677 0 Klp98A FBtr0085211|FBtr0304671 27547773|27547773 27548733|27548733 3R - 27547909 27547970 3'utr Klp98A FlyBase G55170.1 ACTTATAGCAATATGCTAGTTGATATTGAATGGTGAAATTGATCGATCGGCGGATCGATGGC 7 27547951 0.682433053 6 7 49 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 3R:27547909-27547970 7 Klp98A FBtr0085211|FBtr0304671 27547773|27547773 27548733|27548733 TGATATT 7mer-m8 dme-miR-283-5p 3R - 27547914 27547967 3'utr Klp98A FlyBase G41646.1 TATAGCAATATGCTAGTTGATATTGAATGGTGAAATTGATCGATCGGCGGATCG 5 27547944 0.987054416 4 5 40 1 1.079181246 0 0.8 0.916666667 5 0 0 12 3R:27547914-27547967 7 4 4402 FBgn0004387 717.51 15.74333333 24.23 0.005574835 0.254075799 0.165084606 1 -6 -2.5 0.01 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 27548254 27548261 - 3R_27548254_27548261_- 0.385560641 0.385560641 0.385560641 0 Klp98A FBtr0085211|FBtr0304671 27547773|27547773 27548733|27548733 3R - 27548235 27548309 3'utr Klp98A FlyBase G55172.1 TATACGCATAGGTGTACGACTTCCAAAAAGTTATTCCAGTTATTTAGTCTGTGATTGCCAACTGAAGTTATAGAT 51 27548254 0.852845016 12 49 468 0.967741935 1.77815125 0.064516129 0.117647059 0.274193548 51 2 0 60 3R:27548235-27548309 8 Klp98A FBtr0085211|FBtr0304671 27547773|27547773 27548733|27548733 CTGTGATT 8mer-m1 dme-miR-308-3p 3R - 27548234 27548278 3'utr Klp98A FlyBase G41649.1 TATTCCAGTTATTTAGTCTGTGATTGCCAACTGAAGTTATAGATC 32 27548254 0.81003435 5 28 296 0.894736842 1.707570176 0.01754386 0.5 0.719298246 32 6 0 51 3R:27548234-27548278 8 38 4403 FBgn0004387 717.51 15.74333333 24.23 0.052960934 2.413720093 1.568303756 -7 -7 -7 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 3R 27548669 27548674 - 3R_27548669_27548674_- 1 1 1 0 Klp98A FBtr0085211|FBtr0304671 27547773|27547773 27548733|27548733 3R - 27548548 27548730 3'utr Klp98A FlyBase G55174.1 TTAACCTACTGCTGAATTATCTCCTGCCTACAGTGTGTCTTTTTATTTACTTGTACTACCTGTTAAGCTATATGAACGACAACATGGACCTGTTTTGATTAGCTAGCCGAAGCTACTGTGTAGATTAAATTAGTTTTAAGCCCCGTAGCTATGTAAGACCACCAGTGTCCTTTCTAACACTCG 126 27548646 0.95116423 21 120 902 0.951515152 1.718778398 0.175757576 0.246031746 0.424242424 126 6 2 157 3R:27548548-27548730 6 Klp98A FBtr0085211|FBtr0304671 27547773|27547773 27548733|27548733 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 3R - 27548571 27548728 3'utr Klp98A FlyBase G41651.1 AACCTACTGCTGAATTATCTCCTGCCTACAGTGTGTCTTTTTATTTACTTGTACTACCTGTTAAGCTATATGAACGACAACATGGACCTGTTTTGATTAGCTAGCCGAAGCTACTGTGTAGATTAAATTAGTTTTAAGCCCCGTAGCTATGTAAGACC 114 27548646 0.978985086 15 114 779 1 2.227886705 0.325443787 0.333333333 0.550295858 114 0 0 169 3R:27548571-27548728 6 49 4404 FBgn0004387 717.51 15.74333333 24.23 0.068291731 3.112428541 2.022286422 -28 -28 -28 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 27559403 27559408 - 3R_27559403_27559408_- 1 1 1 0 CG5646 FBtr0085210 27559377 27559640 3R - 27559385 27559433 3'utr CG5646 FlyBase G55183.1 AATTTTGTAAGCTTTAAAATTAAAATGATGACAAATTGCGTCCATGAAC 14 27559389 0.869600482 5 13 68 1 1.301029996 0.35 0.285714286 0.5 14 0 0 20 3R:27559385-27559433 6 CG5646 FBtr0085210 27559377 27559640 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R - 27559385 27559412 3'utr CG5646 FlyBase G41657.1 AAAATGATGACAAATTGCGTCCATGAAC 17 27559389 0.847512632 4 16 72 0.956521739 1.342422681 0.304347826 0.294117647 0.47826087 17 1 0 22 3R:27559385-27559412 6 14.5 4405 FBgn0039525 64.01333333 6.243333333 9.573333333 0.226515309 2.322477309 1.514623955 -19 -19 -19 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 27562765 27562770 - 3R_27562765_27562770_- 1 1 1 0 wdb FBtr0085205|FBtr0085205|FBtr0085205|FBtr0085204|FBtr0085204|FBtr0085204|FBtr0085208|FBtr0085208|FBtr0085208 27561673|27561673|27561673|27561673|27561673|27561673|27561673|27561673|27561673 27565568|27565568|27565568|27565568|27565568|27565568|27565568|27565568|27565568 3R - 27562728 27562780 3'utr wdb FlyBase G55187.1 TCGTTTGTTTTGTGATCAACACCTTTGTTGCACTCTGAGTTAATCTGTTTAGT 9 27562771 0.990109938 6 9 96 1 1.079181246 0.666666667 0.222222222 0.416666667 9 0 0 12 3R:27562728-27562780 6 wdb FBtr0085208|FBtr0085208|FBtr0085208|FBtr0085204|FBtr0085204|FBtr0085204|FBtr0085205|FBtr0085205|FBtr0085205 27561673|27561673|27561673|27561673|27561673|27561673|27561673|27561673|27561673 27565568|27565568|27565568|27565568|27565568|27565568|27565568|27565568|27565568 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 27562754 27562807 3'utr wdb FlyBase G41661.1 AATGATTATTGCCTCTTCATCATCATTTCGTTTGTTTTGTGATCAACACCTTTG 12 27562771 0.994136184 4 9 124 0.888888889 0.726998728 0.277777778 0.333333333 0.555555556 12 0 2 16 3R:27562754-27562807 6 8.5 4406 FBgn0027492 2914.523333 83.19 128.17 0.002916429 0.102175742 0.066318171 1 1 1 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 27564381 27564386 - 3R_27564381_27564386_- 1 1 1 0 wdb FBtr0085205|FBtr0085204|FBtr0085208 27561673|27561673|27561673 27565568|27565568|27565568 3R - 27564341 27564395 3'utr wdb FlyBase G55193.1 GATAAACGCTGATCTATATAAATGTATGTAAAGTGTAAAGCGGCGGATACACAAA 8 27564378 0.97757128 6 8 55 1 1 0.5 0.25 0.4 8 0 0 10 3R:27564341-27564395 6 wdb FBtr0085208|FBtr0085204|FBtr0085205 27561673|27561673|27561673 27565568|27565568|27565568 TGATCT 6mer3-8 dme-bantam-3p 3R - 27564373 27564405 3'utr wdb FlyBase G41664.1 TATAACGTACGATAAACGCTGATCTATATAAAT 7 27564379 0.741171191 4 7 43 1 1.041392685 0 0.285714286 0.545454545 7 0 0 11 3R:27564373-27564405 6 7 4407 FBgn0027492 2914.523333 83.19 128.17 0.002401765 0.084144729 0.054614965 -8 -7 -7.5 0.01 dme-miR-12-5p 6mer2-7 ATACTC 3R 27565372 27565377 - 3R_27565372_27565377_- 1 1 1 0 wdb FBtr0085205|FBtr0085203|FBtr0085209|FBtr0085204|FBtr0085207|FBtr0085208 27561673|27565040|27565040|27561673|27565040|27561673 27565568|27565568|27565568|27565568|27565568|27565568 3R - 27565365 27565470 3'utr wdb FlyBase G55201.1 AAGCAAGCAACCACATCTAAAGGAGAAATAAATAGTTATACTAAACCACACATATGCTAAACCTTAAAACCAGAAAACATAAAACTGAAACGTATACTCGATTGAC 35 27565391 0.926050507 9 27 97 0.7 1.447158031 0.05 0.142857143 0.25 35 12 0 28 3R:27565365-27565470 6 wdb FBtr0085207|FBtr0085208|FBtr0085209|FBtr0085204|FBtr0085205|FBtr0085203 27565040|27561673|27565040|27561673|27561673|27565040 27565568|27565568|27565568|27565568|27565568|27565568 ATACTC 6mer2-7 dme-miR-12-5p 3R - 27565264 27565403 3'utr wdb FlyBase G41669.1 AACCAGAAAACATAAAACTGAAACGTATACTCGATTGACAAGACACCAACCAAGCTGGCCAGACCCACAGCTCGCTTGGGCGGCTGTTGAAGGAGGTAGAACCGAAATCTGGATCGGGATCAGGATCGGGAGCTGGATCA 26 27565391 0.900476122 10 21 66 0.875 1.146128036 0.15625 0.230769231 0.375 26 3 1 28 3R:27565264-27565403 6 7 4408 FBgn0027492 2914.523333 83.19 128.17 0.002401765 0.084144729 0.054614965 14 14 14 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 27585541 27585546 + 3R_27585541_27585546_+ 1 1 1 0 pins FBtr0085189 27585321 27586376 3R + 27585479 27585565 3'utr pins FlyBase G46255.1 AAGATTTATATATACACACGTACACGAAAAGCATTAATTTATGAATAGCAACTAACCACGTAACCAAATATTAGGGGTGTATAGGGC 8 27585549 0.942401673 6 8 37 1 0.903089987 0.5 0 0 8 0 0 8 3R:27585479-27585565 6 pins FBtr0085189 27585321 27586376 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 27585525 27585568 3'utr pins FlyBase G34896.1 AGCAACTAACCACGTAACCAAATATTAGGGGTGTATAGGGCCTC 5 27585549 0.971052433 3 4 24 0.857142857 0.77815125 0.142857143 0.4 0.571428571 5 1 0 6 3R:27585525-27585568 6 4 4409 FBgn0040080 1104.993333 40.80333333 62.47 0.003619931 0.098031207 0.064030735 -8 -8 -8 0.01 dme-miR-7-5p 6mer3-8 GTCTTC 3R 27585774 27585779 + 3R_27585774_27585779_+ 1 1 1 0 pins FBtr0085189 27585321 27586376 3R + 27585701 27585786 3'utr pins FlyBase G46257.1 AATTGCATGTGCAAGTAGTTTAAGCCGGATAATACTAATGTACTAATCCAATTTGCTCAATAGACGGAACCAAGTCTTCTCTACGA 11 27585754 0.965539612 9 11 60 1 1.146128036 0.214285714 0.272727273 0.428571429 11 0 0 14 3R:27585701-27585786 6 pins FBtr0085189 27585321 27586376 GTCTTC 6mer3-8 dme-miR-7-5p 3R + 27585738 27585778 3'utr pins FlyBase G34898.1 ATGTACTAATCCAATTTGCTCAATAGACGGAACCAAGTCTT 5 27585753 0.977323709 4 4 25 0.8 0.602059991 0 0 0 5 1 0 4 3R:27585738-27585778 5 3 4410 FBgn0040080 1104.993333 40.80333333 62.47 0.002714949 0.073523405 0.048023051 20 21 20.5 0.01 dme-miR-980-3p 6mer3-8 GGCAGC 3R 27598074 27598079 - 3R_27598074_27598079_- 1 1 1 0 dsd FBtr0335247|FBtr0301390 27597561|27597759 27599034|27599034 3R - 27598058 27598103 3'utr dsd FlyBase G55223.1 AAACTAATCGTAAGGTTTCCTCTTGGCAGCAGCAAACAAACAAAAA 40 27598080 0.966817754 2 40 216 1 1.698970004 0.06 0.2 0.36 40 0 0 50 3R:27598058-27598103 6 dsd FBtr0335247|FBtr0301390 27597561|27597759 27599034|27599034 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 27598059 27598104 3'utr dsd FlyBase G41686.1 CAAACTAATCGTAAGGTTTCCTCTTGGCAGCAGCAAACAAACAAAA 28 27598080 0.970932985 2 28 162 1 1.556302501 0.222222222 0.285714286 0.444444444 28 0 0 36 3R:27598059-27598104 6 34 4411 FBgn0039528 2636.286667 54.87666667 84.28333333 0.012896928 0.61957116 0.403401226 1 1 1 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 27598484 27598489 - 3R_27598484_27598489_- 1 1 1 0 dsd FBtr0335247|FBtr0301390 27597561|27597759 27599034|27599034 3R - 27598439 27598507 3'utr dsd FlyBase G55225.1 AAACAAAAGACATTCAATTGATCTTAGCAAAAAAAAAAGTGATGAACCAAACCAGAGGACAGGCAGACA 20 27598489 0.970494347 4 20 110 1 1.462397998 0 0.35 0.551724138 20 0 0 29 3R:27598439-27598507 6 dsd FBtr0335247|FBtr0301390 27597561|27597759 27599034|27599034 TGATCT 6mer3-8 dme-bantam-3p 3R - 27598443 27598506 3'utr dsd FlyBase G41688.2 AACAAAAGACATTCAATTGATCTTAGCAAAAAAAAAAGTGATGAACCAAACCAGAGGACAGGCA 22 27598489 0.974488327 5 21 116 0.96969697 1.505149978 0.090909091 0.409090909 0.606060606 22 1 0 32 3R:27598443-27598506 6 18.5 4412 FBgn0039528 2636.286667 54.87666667 84.28333333 0.007017446 0.337119602 0.219497726 0 0 0 0.01 dme-miR-1003-3p 6mer2-7 TGTGAG 3R 27598556 27598561 - 3R_27598556_27598561_- 1 0.996000284 0.998000142 0.002828215 dsd FBtr0335247|FBtr0301390 27597561|27597759 27599034|27599034 3R - 27598509 27598575 3'utr dsd FlyBase G55226.1 ATTTATGCAAATTTTGTGAGCTGCCCCGGCAGCAGTTGCACCATATGCCGCGACAGAAACAGAGTTA 35 27598562 0.976797909 6 33 211 0.928571429 1.290034611 0.238095238 0.2 0.333333333 35 2 1 39 3R:27598509-27598575 6 dsd FBtr0335247|FBtr0301390 27597561|27597759 27599034|27599034 TGTGAG 6mer2-7 dme-miR-1003-3p 3R - 27598538 27598572 3'utr dsd FlyBase G41689.1 TATGCAAATTTTGTGAGCTGCCCCGGCAGCAGTTG 15 27598562 0.580762985 4 12 94 0.826086957 0.801632346 0.086956522 0.533333333 0.695652174 15 2 2 19 3R:27598538-27598572 6 24 4413 FBgn0039528 2636.286667 54.87666667 84.28333333 0.009103714 0.437344348 0.284753807 1 1 1 0.01 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 27639105 27639112 + 3R_27639105_27639112_+ 0.63113665 0.63113665 0.63113665 0 Mtl FBtr0085192|FBtr0085193 27638699|27638699 27639871|27639871 3R + 27639078 27639156 3'utr Mtl FlyBase G46263.1 AAATCTAATGCACTACATATGTAGAAATCTAGTCAATTGAATCGAATGTATTGTACGAATAGTATCTGGCAGAAAGAGA 45 27639105 0.984277687 10 42 334 0.928571429 1.113943352 0.517857143 0.155555556 0.321428571 45 1 3 52 3R:27639078-27639156 8 Mtl FBtr0085193|FBtr0085192 27638699|27638699 27639871|27639871 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 27639078 27639153 3'utr Mtl FlyBase G34904.1 AAATCTAATGCACTACATATGTAGAAATCTAGTCAATTGAATCGAATGTATTGTACGAATAGTATCTGGCAGAAAG 48 27639114 0.985072996 10 42 334 0.902777778 1.511883361 0.430555556 0.416666667 0.611111111 48 6 1 65 3R:27639078-27639153 8 44 4414 FBgn0039532 1160.21 67.97 104.5233333 0.037924169 0.647344417 0.420958638 0 -9 -4.5 0.01 dme-miR-283-5p 7mer-m8 TGATATT 3R 27639341 27639347 + 3R_27639341_27639347_+ 0.620203677 0.620203677 0.620203677 0 Mtl FBtr0085192|FBtr0085193 27638699|27638699 27639871|27639871 3R + 27639306 27639361 3'utr Mtl FlyBase G46265.1 ACTTGACGACGAGCTCTTAGAGAAGCCACTTTTTATGATATTCAAGCATGCGCATT 7 27639341 0.986785929 3 7 56 1 0.84509804 0 0 0 7 0 0 7 3R:27639306-27639361 7 Mtl FBtr0085193|FBtr0085192 27638699|27638699 27639871|27639871 TGATATT 7mer-m8 dme-miR-283-5p 3R + 27639287 27639352 3'utr Mtl FlyBase G34906.1 TCTGAAACCAGGCCAATTCACTTGACGACGAGCTCTTAGAGAAGCCACTTTTTATGATATTCAAGC 7 27639322 0.977519334 3 6 40 0.928571429 1.113943352 0.357142857 0.714285714 0.857142857 7 1 0 13 3R:27639287-27639352 7 4 4415 FBgn0039532 1160.21 67.97 104.5233333 0.003447652 0.058849492 0.038268967 0 19 9.5 0.01 dme-miR-2535b-3p 6mer3-8 CCGTGA 3R 27639809 27639814 + 3R_27639809_27639814_+ 1 1 1 0 Mtl FBtr0085192|FBtr0085193 27638699|27638699 27639871|27639871 3R + 27639753 27639831 3'utr Mtl FlyBase G46267.1 AAGTCTTATGTAAATGAAATGTAAACGAAGGCCGTTTGGCTCCAGCGATGTAGTAGCCGTGAAACAGATTTAATACTTA 11 27639806 0.957128157 6 11 56 1 1.113943352 0.153846154 0.181818182 0.307692308 11 0 0 13 3R:27639753-27639831 6 Mtl FBtr0085193|FBtr0085192 27638699|27638699 27639871|27639871 CCGTGA 6mer3-8 dme-miR-2535b-3p 3R + 27639789 27639816 3'utr Mtl FlyBase G34908.1 TGGCTCCAGCGATGTAGTAGCCGTGAAA 5 27639806 0.770466242 2 5 19 1 0.903089987 0.375 0.6 0.75 5 0 0 8 3R:27639789-27639816 6 6 4416 FBgn0039532 1160.21 67.97 104.5233333 0.005171478 0.088274239 0.057403451 3 3 3 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 3R 27680003 27680009 + 3R_27680003_27680009_+ 0.671796082 0.671796082 0.671796082 0 CG12883 FBtr0085216 27679952 27680336 3R + 27679983 27680038 3'utr CG12883 FlyBase G46279.1 GTGTGCACTGTTCAACGCCTACCAAAGTCACATGGTTACCTTTGGAGCATCGCACT 65 27680025 0.978943676 5 62 403 0.972972973 1.857332496 0.364864865 0.125 0.243243243 64 2 0 72 3R:27679983-27680038 7 CG12883 FBtr0085216 27679952 27680336 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 27679996 27680036 3'utr CG12883 FlyBase G34918.1 AACGCCTACCAAAGTCACATGGTTACCTTTGGAGCATCGCA 60 27680025 0.689893997 3 60 375 1 1.959041392 0.252747253 0.333333333 0.56043956 60 0 0 91 3R:27679996-27680036 7 48 4417 FBgn0039538 103.9833333 13.51666667 20.85666667 0.461612438 3.551171393 2.301422407 -22 -22 -22 0.01 dme-miR-184-3p 6mer2-7 CCGTCC 3R 27680148 27680153 + 3R_27680148_27680153_+ 1 1 1 0 CG12883 FBtr0085216 27679952 27680336 3R + 27680133 27680200 3'utr CG12883 FlyBase G46280.1 ACGAAGAAACGGAAACCGTCCTCCTATCTCATTGTGGCTTCCGAGTCGTGCTAGAGCCTAAGCTCACC 19 27680154 0.983849375 7 13 102 0.7 1.146128036 0.05 0.052631579 0.1 19 6 0 14 3R:27680133-27680200 6 CG12883 FBtr0085216 27679952 27680336 CCGTCC 6mer2-7 dme-miR-184-3p 3R + 27680135 27680190 3'utr CG12883 FlyBase G34920.2 GAAGAAACGGAAACCGTCCTCCTATCTCATTGTGGCTTCCGAGTCGTGCTAGAGCC 9 27680164 0.885198103 6 6 53 0.857142857 1.079181246 0 0.444444444 0.642857143 9 2 0 12 3R:27680135-27680190 6 7 4418 FBgn0039538 103.9833333 13.51666667 20.85666667 0.067318481 0.517879162 0.335624101 -6 -16 -11 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 27696484 27696491 + 3R_27696484_27696491_+ 0.650171355 0.650171355 0.650171355 0 CG43320 FBtr0306924|FBtr0306924|FBtr0306924 27696450|27696450|27696450 27696531|27696531|27696531 3R + 27696460 27696503 3'utr CG43320 FlyBase G46282.1 ACGTGTCTAGGGTAAGAACGTTTACTGTGATACGTGATAATAAT 61 27696481 0.756387817 6 60 503 0.985294118 1.826074803 0.455882353 0.114754098 0.205882353 61 1 0 67 3R:27696460-27696503 8 CG43320 FBtr0306924|FBtr0306924|FBtr0306924 27696450|27696450|27696450 27696531|27696531|27696531 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 27696459 27696500 3'utr CG43320 FlyBase G34922.1 CACGTGTCTAGGGTAAGAACGTTTACTGTGATACGTGATAAT 39 27696481 0.761456478 4 38 315 0.98245614 1.748188027 0.596491228 0.333333333 0.543859649 39 1 0 56 3R:27696459-27696500 8 50 4419 FBgn0263025 42.64 4.076666667 6.266666667 1.17260788 12.26492232 7.978723404 3 3 3 0.01 dme-miR-307a-3p 7mer-A1 GTTGTGA 3R 27933007 27933013 - 3R_27933007_27933013_- 0.823349562 0.823349562 0.823349562 0 Mes-4 FBtr0085267|FBtr0335014 27932980|27932980 27933182|27933182 3R - 27933001 27933038 3'utr Mes-4 FlyBase G55292.1 TGGAGATTGTGCTGAACAGATGGATGTTGTGAAAATAA 6 27933014 0.71400301 4 5 33 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3R:27933001-27933038 7 Mes-4 FBtr0335014|FBtr0085267 27932980|27932980 27933182|27933182 GTTGTGA 7mer-A1 dme-miR-307a-3p 3R - 27932989 27933035 3'utr Mes-4 FlyBase G41727.1 AGATTGTGCTGAACAGATGGATGTTGTGAAAATAAAGTGAGACGATT 12 27933017 0.861487842 7 10 64 0.875 0.84509804 0.375 0.25 0.4375 12 1 1 14 3R:27932989-27933035 7 6.5 4420 FBgn0039559 1839.39 48.38 74.15333333 0.00353378 0.134353038 0.087656208 1 4 2.5 0.01 dme-bantam-3p 7mer-m8 TGATCTC 3R 27942649 27942655 + 3R_27942649_27942655_+ 0.661615243 0.661615243 0.661615243 0 CG5514 FBtr0301143 27942441 27942778 3R + 27942554 27942675 intron-3'utr CG5514 FlyBase G46349.1 TGCGTGTGACTAAAGTGCTTGTTTTTATCAGCAGACGCCCTGTCCGCCAGGCGACTCAGCAAGAAGCTCTGCCAGCAGCAGCGGTACACCAACGATGATCTCTACAAGCCCCGTCCAATCCT 155 27942649 0.945020675 10 151 617 0.97740113 1.937016107 0.192090395 0.103225806 0.214689266 155 3 1 173 3R:27942554-27942675 7 CG5514 FBtr0085252|FBtr0301143 27942441|27942441 27942778|27942778 TGATCTC 7mer-m8 dme-bantam-3p 3R + 27942622 27942724 stop_codon CG5514 FlyBase G34979.1 CTGCCAGCAGCAGCGGTACACCAACGATGATCTCTACAAGCCCCGTCCAATCCTGTCGCAGCGCTCTCGTCGCCGGGGCCTGGACTCCATTCTCTAGCCAACG 80 27942649 0.939774268 11 78 318 0.9609375 2.089905111 0.25 0.425 0.640625 80 5 0 123 3R:27942622-27942724 7 109 4421 FBgn0039560 308.5966667 10.24 15.73 0.353211851 10.64453125 6.929434202 0 0 0 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 28319903 28319908 - 3R_28319903_28319908_- 1 1 1 0 larp FBtr0306389|FBtr0306390|FBtr0306388|FBtr0301181|FBtr0301180|FBtr0089682|FBtr0089680 28318160|28318160|28318160|28318160|28318160|28318160|28318160 28320581|28320581|28320581|28320581|28320581|28320581|28320581 3R - 28319879 28319992 3'utr larp FlyBase G55332.1 CGATATAACCTATGCAAATATTACCTAACGAAAACTGAAAACCAATCAATCGAAATTGATACGCAAGCAACAACAAAAACCAAATGATCTTAATGCAAATAAATTTTGTAAATT 1150 28319908 0.979048701 16 1138 4999 0.9886121 2.239612259 0.019217082 0.175652174 0.325266904 1150 9 7 1389 3R:28319879-28319992 6 larp FBtr0301181|FBtr0301180|FBtr0089682|FBtr0089680|FBtr0306389|FBtr0306390|FBtr0306388 28318160|28318160|28318160|28318160|28318160|28318160|28318160 28320581|28320581|28320581|28320581|28320581|28320581|28320581 TGATCT 6mer3-8 dme-bantam-3p 3R - 28319880 28319953 3'utr larp FlyBase G41762.1 AACCAATCAATCGAAATTGATACGCAAGCAACAACAAAAACCAAATGATCTTAATGCAAATAAATTTTGTAAAT 815 28319908 0.977454823 10 801 3509 0.984100418 2.769377326 0.011715481 0.319018405 0.535564854 815 18 1 1176 3R:28319880-28319953 6 967 4422 FBgn0261618 9245.076667 138.0666667 210.28 0.104596212 7.003862868 4.598630398 0 0 0 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 28320184 28320189 - 3R_28320184_28320189_- 1 1 1 0 larp FBtr0306389|FBtr0306390|FBtr0306388|FBtr0301181|FBtr0301180|FBtr0089682|FBtr0089680 28318160|28318160|28318160|28318160|28318160|28318160|28318160 28320581|28320581|28320581|28320581|28320581|28320581|28320581 3R - 28320147 28320256 3'utr larp FlyBase G55333.2 CACACACACACACATACCAATTACACACAGCGGGGTCTGTCTGCTTTGTACCAGTGCCAACCAGCCATGATCTTGGAAAATAACGAAACGATTGCCCTTATTTTTTTTTT 299 28320189 0.95636886 18 293 1595 0.980662983 2.073107098 0.154696133 0.16722408 0.312154696 299 5 2 355 3R:28320147-28320256 6 larp FBtr0301181|FBtr0301180|FBtr0089682|FBtr0089680|FBtr0306389|FBtr0306390|FBtr0306388 28318160|28318160|28318160|28318160|28318160|28318160|28318160 28320581|28320581|28320581|28320581|28320581|28320581|28320581 TGATCT 6mer3-8 dme-bantam-3p 3R - 28320018 28320354 3'utr larp FlyBase G41763.1 GGTTTAGTAGTTACGATTCCAAATGTTTGTTTCTCGCATACCCTCGACAAAAAACTAAAACAATGGTTGCTTACAAAATGCTCAATGCTCACACAAAACACACACACACACATACCAATTACACACAGCGGGGTCTGTCTGCTTTGTACCAGTGCCAACCAGCCATGATCTTGGAAAATAACGAAACGATTGCCCTTATTTTTTTTTTTTGTTCTGTTAATTATTCTCCTTATTTTTTATGCGATGCAAAAATCAAGGCAAAGATTTTCCTACTTAGAGCAGCGTTAATAGTTGACGTAATGCCATGAACTGTTGTACTATACGATTAAAGTTAAAG 303 28320189 0.972030035 39 300 1773 0.991208791 2.353146546 0.178021978 0.382838284 0.589010989 303 3 1 451 3R:28320018-28320354 6 159.5 4423 FBgn0261618 9245.076667 138.0666667 210.28 0.017252426 1.155239015 0.75851246 0 0 0 0.01 dme-miR-986-5p 7mer-m8 ATTCGAG 3R 28320445 28320451 - 3R_28320445_28320451_- 0.671796708 0.671796708 0.671796708 0 larp FBtr0306389|FBtr0306390|FBtr0306388|FBtr0301181|FBtr0301180|FBtr0089682|FBtr0089680 28318160|28318160|28318160|28318160|28318160|28318160|28318160 28320581|28320581|28320581|28320581|28320581|28320581|28320581 3R - 28320405 28320648 stop_codon larp FlyBase G55334.2 AGCAACATCAACAGCAGCGACGCCAGCGGTAACGGTATCTTCGGGGTCATCGTCGTCGAAGAAGTAGTTACACGATAATGCAGAGACACTTTTTGGATTAGGCTTAAGTTAATATCTACCGCTTAGTTTTCAGGGGGCACTCGCATTTGATGGCTCCACACTCTTTTGTTTATTCATTCTTATTATTCTTTTGTAGTATTCGAGTCAAACGTAAAGTGGGAAGAGTTGTTAGCGTTTAGCATAA 283 28320450 0.935001739 39 273 1947 0.974504249 1.837588438 0.141643059 0.183745583 0.345609065 283 5 4 344 3R:28320405-28320648 7 larp FBtr0301181|FBtr0301180|FBtr0089682|FBtr0089680|FBtr0306389|FBtr0306390|FBtr0306388 28318160|28318160|28318160|28318160|28318160|28318160|28318160 28320581|28320581|28320581|28320581|28320581|28320581|28320581 ATTCGAG 7mer-m8 dme-miR-986-5p 3R - 28320390 28320481 3'utr larp FlyBase G41764.1 GTTTATTCATTCTTATTATTCTTTTGTAGTATTCGAGTCAAACGTAAAGTGGGAAGAGTTGTTAGCGTTTAGCATAATTAAGTGAAATTTTT 152 28320450 0.933300818 12 148 1019 0.960869565 2.344392274 0.07826087 0.361842105 0.57826087 152 9 0 221 3R:28320390-28320481 7 160.5 4424 FBgn0261618 9245.076667 138.0666667 210.28 0.017360592 1.162481893 0.763268024 -1 -1 -1 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 28520748 28520753 - 3R_28520748_28520753_- 1 1 1 0 Ppn FBtr0301837|FBtr0300337|FBtr0301839|FBtr0301838 28520663|28520663|28520663|28520663 28521128|28521128|28521128|28521128 3R - 28520719 28520792 3'utr Ppn FlyBase G55382.1 CGAATTTGCCTTCTACTTTTTAGTTTCTACGACATTTCTGTGCAACGAGTAAAGCATTTAAGCCTAAAAACCAA 12 28520756 0.987747557 7 11 94 0.928571429 1.113943352 0.142857143 0.083333333 0.214285714 12 1 0 13 3R:28520719-28520792 6 Ppn FBtr0301839|FBtr0301838|FBtr0301837|FBtr0300337 28520663|28520663|28520663|28520663 28521128|28521128|28521128|28521128 GTGCAA 6mer3-8 dme-miR-92b-3p 3R - 28520703 28520766 3'utr Ppn FlyBase G41807.1 CTACGACATTTCTGTGCAACGAGTAAAGCATTTAAGCCTAAAAACCAATAATTGTAAATAAATT 6 28520757 0.955176864 5 6 31 1 1 0.4 0.5 0.7 6 0 0 10 3R:28520703-28520766 6 5.5 4425 FBgn0003137 888.9833333 12.49 19.08666667 0.006186843 0.440352282 0.288159273 3 4 3.5 0.01 dme-miR-276a-3p 7mer-A1 GTTCCTA 3R 28520850 28520856 - 3R_28520850_28520856_- 0.822277746 0.823332617 0.822805181 0.000745927 Ppn FBtr0301837|FBtr0300337|FBtr0301839|FBtr0301838 28520663|28520663|28520663|28520663 28521128|28521128|28521128|28521128 3R - 28520835 28520912 3'utr Ppn FlyBase G55383.1 AGTATTTTACTCTCTTCCAGGACAAAAGCAAATAGTATTAGTGATTTTATGTTTGTGTTCCTATTTATTCTTGATAAC 13 28520859 0.91937244 10 12 151 0.9375 1.176091259 0.3125 0.230769231 0.375 13 1 0 15 3R:28520835-28520912 7 Ppn FBtr0301839|FBtr0301838|FBtr0301837|FBtr0300337 28520663|28520663|28520663|28520663 28521128|28521128|28521128|28521128 GTTCCTA 7mer-A1 dme-miR-276a-3p 3R - 28520823 28520889 3'utr Ppn FlyBase G41808.1 AAAAGCAAATAGTATTAGTGATTTTATGTTTGTGTTCCTATTTATTCTTGATAACGAGTAACCTTAA 9 28520859 0.990984146 7 8 83 0.909090909 1 0.090909091 0.111111111 0.272727273 9 1 0 10 3R:28520823-28520889 7 6 4426 FBgn0003137 888.9833333 12.49 19.08666667 0.006749283 0.480384307 0.314355571 3 3 3 0.01 dme-miR-184-5p 6mer3-8 TGATAA 3R 28604719 28604724 + 3R_28604719_28604724_+ 1 1 1 0 Hrb98DE FBtr0085299|FBtr0085301|FBtr0085302|FBtr0085298 28603680|28603680|28603680|28603680 28605095|28605095|28604759|28605095 3R + 28604519 28604922 3'utr Hrb98DE FlyBase G46396.1 AAGTAACATTGTAATTAGATCCACAAAGCCGACGACAGGCCAAACATTTGTATCTCCACCACACGAGCAACCAACCAACCAACCTACTTAAAACAACCAGTCATAAACGAATCAGCTATGTAAAACTTCAAGGCGGCAGCCGAGAGATATGTTTCTTTGGTTGCAGACAGCTCTCCAGTCCATCGGCTGCCGGCAACTTTTGATAATCAGAGCAGAAAACACAAAATATATAAAAACATGTATTACATTTTACAACTTTACTAGGCTAAGTTCTCATAGAATTAAATCGAGTAGAGCGTGCGGAGCGACTTCTGCATCCATCCGCACGCTACCCTAGTCTTAATAATTTTACTATTCAAGTTCTAAGCGAACCTGACCGTGTGTGGAGGAATCTAGATACTTAG 451 28604718 0.976349923 57 432 2773 0.962264151 2.105510185 0.235849057 0.133037694 0.262264151 451 17 3 510 3R:28604519-28604922 6 Hrb98DE FBtr0085298|FBtr0085302|FBtr0085301|FBtr0085299 28603680|28603680|28603680|28603680 28605095|28604759|28605095|28605095 TGATAA 6mer3-8 dme-miR-184-5p 3R + 28604684 28605066 3'utr Hrb98DE FlyBase G35017.1 GACAGCTCTCCAGTCCATCGGCTGCCGGCAACTTTTGATAATCAGAGCAGAAAACACAAAATATATAAAAACATGTATTACATTTTACAACTTTACTAGGCTAAGTTCTCATAGAATTAAATCGAGTAGAGCGTGCGGAGCGACTTCTGCATCCATCCGCACGCTACCCTAGTCTTAATAATTTTACTATTCAAGTTCTAAGCGAACCTGACCGTGTGTGGAGGAATCTAGATACTTAGATTTTTGAATAAGTGTCGACATGGATATAACCTCTTCCGCTGCTTAGATGTAACCGATCAACAAACAACCTTTATTGTAATTTATACCTTTTAGCAAGCAGTCTGTCTGAGGAGTCAGCGCAATTATACTTAACAAAATTTACA 278 28604718 0.980661151 57 258 1836 0.924050633 1.784141614 0.235443038 0.338129496 0.534177215 278 25 5 365 3R:28604684-28605066 6 68.5 4427 FBgn0001215 2586.11 154.2966667 237.9433333 0.026487659 0.443949967 0.28788367 1 1 1 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3R 28604852 28604857 + 3R_28604852_28604857_+ 1 1 1 0 Hrb98DE FBtr0085299|FBtr0085301|FBtr0085298 28603680|28603680|28603680 28605095|28605095|28605095 3R + 28604519 28604922 3'utr Hrb98DE FlyBase G46396.1 AAGTAACATTGTAATTAGATCCACAAAGCCGACGACAGGCCAAACATTTGTATCTCCACCACACGAGCAACCAACCAACCAACCTACTTAAAACAACCAGTCATAAACGAATCAGCTATGTAAAACTTCAAGGCGGCAGCCGAGAGATATGTTTCTTTGGTTGCAGACAGCTCTCCAGTCCATCGGCTGCCGGCAACTTTTGATAATCAGAGCAGAAAACACAAAATATATAAAAACATGTATTACATTTTACAACTTTACTAGGCTAAGTTCTCATAGAATTAAATCGAGTAGAGCGTGCGGAGCGACTTCTGCATCCATCCGCACGCTACCCTAGTCTTAATAATTTTACTATTCAAGTTCTAAGCGAACCTGACCGTGTGTGGAGGAATCTAGATACTTAG 451 28604858 0.976349923 57 432 2773 0.962264151 2.105510185 0.235849057 0.133037694 0.262264151 451 17 3 510 3R:28604519-28604922 6 Hrb98DE FBtr0085298|FBtr0085301|FBtr0085299 28603680|28603680|28603680 28605095|28605095|28605095 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3R + 28604684 28605066 3'utr Hrb98DE FlyBase G35017.1 GACAGCTCTCCAGTCCATCGGCTGCCGGCAACTTTTGATAATCAGAGCAGAAAACACAAAATATATAAAAACATGTATTACATTTTACAACTTTACTAGGCTAAGTTCTCATAGAATTAAATCGAGTAGAGCGTGCGGAGCGACTTCTGCATCCATCCGCACGCTACCCTAGTCTTAATAATTTTACTATTCAAGTTCTAAGCGAACCTGACCGTGTGTGGAGGAATCTAGATACTTAGATTTTTGAATAAGTGTCGACATGGATATAACCTCTTCCGCTGCTTAGATGTAACCGATCAACAAACAACCTTTATTGTAATTTATACCTTTTAGCAAGCAGTCTGTCTGAGGAGTCAGCGCAATTATACTTAACAAAATTTACA 278 28604858 0.980661151 57 258 1836 0.924050633 1.784141614 0.235443038 0.338129496 0.534177215 278 25 5 365 3R:28604684-28605066 6 70.5 4428 FBgn0001215 2586.11 154.2966667 237.9433333 0.027261021 0.456912009 0.296289032 -6 -6 -6 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3R 28609026 28609032 - 3R_28609026_28609032_- 0.808818836 0.808818836 0.808818836 0 CG10011 FBtr0085319|FBtr0085319 28607937|28607937 28609394|28609394 3R - 28608991 28609046 3'utr CG10011 FlyBase G55401.1 ACGACACGAATGTATACTTAAGAGAGCTCAGACTCAGCACTGTTCTCAGAATTAAT 12 28609035 0.901715016 6 10 66 0.833333333 0.698970004 0.083333333 0 0 12 1 1 10 3R:28608991-28609046 7 CG10011 FBtr0085319|FBtr0085319 28607937|28607937 28609394|28609394 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3R - 28608994 28609046 3'utr CG10011 FlyBase G41817.1 ACGACACGAATGTATACTTAAGAGAGCTCAGACTCAGCACTGTTCTCAGAATT 5 28609028 0.978696285 4 5 24 1 0.954242509 0.222222222 0.8 0.888888889 5 0 0 9 3R:28608994-28609046 7 6.5 4429 FBgn0039590 962.0733333 13.5 20.90333333 0.006756242 0.481481481 0.310955191 3 -4 -0.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 28609248 28609254 - 3R_28609248_28609254_- 0.801970437 0.801970437 0.801970437 0 CG10011 FBtr0085319|FBtr0085319|FBtr0085319 28607937|28607937|28607937 28609394|28609394|28609394 3R - 28609241 28609283 3'utr CG10011 FlyBase G55402.1 TTAGTACTTTTCAGAAAGTATTTGTTTTTTGTGATAGTTTCAA 13 28609255 0.707454133 3 11 173 0.947368421 1.255272505 0.210526316 0.307692308 0.526315789 13 1 0 18 3R:28609241-28609283 7 CG10011 FBtr0085319|FBtr0085319|FBtr0085319 28607937|28607937|28607937 28609394|28609394|28609394 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 28609241 28609270 3'utr CG10011 FlyBase G41818.1 GAAAGTATTTGTTTTTTGTGATAGTTTCAA 5 28609255 0.666793151 3 5 64 1 0.84509804 0.571428571 0.4 0.571428571 5 0 0 7 3R:28609241-28609270 7 8.5 4430 FBgn0039590 962.0733333 13.5 20.90333333 0.008835085 0.62962963 0.406633711 1 1 1 0.01 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 28695565 28695572 + 3R_28695565_28695572_+ 0.385560641 0.385560641 0.385560641 0 CG9990 FBtr0085309|FBtr0305087|FBtr0336787|FBtr0303343|FBtr0305088|FBtr0085308 28695157|28695157|28695157|28695157|28695157|28695157 28695939|28695939|28695939|28695939|28695939|28695939 3R + 28695543 28695578 3'utr CG9990 FlyBase G46413.1 AATTTTATATATTTTCAATGGACTGTGATTGTTTTT 15 28695561 0.736746895 5 14 159 0.95 1.278753601 0.05 0.266666667 0.45 15 1 0 19 3R:28695543-28695578 8 CG9990 FBtr0305088|FBtr0085308|FBtr0336787|FBtr0303343|FBtr0085309|FBtr0305087 28695157|28695157|28695157|28695157|28695157|28695157 28695939|28695939|28695939|28695939|28695939|28695939 CTGTGATT 8mer-m1 dme-miR-308-3p 3R + 28695548 28695583 3'utr CG9990 FlyBase G35026.1 TATATATTTTCAATGGACTGTGATTGTTTTTTCTAC 13 28695560 0.745503027 6 13 126 1 1.230448921 0.352941176 0.230769231 0.411764706 13 0 0 17 3R:28695548-28695583 8 14 4431 FBgn0039594 1 0.036666667 0.056666667 14 381.8181818 247.0588235 4 5 4.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 28815848 28815853 + 3R_28815848_28815853_+ 1 1 1 0 CG1646 FBtr0113301 28814209 28817354 3R + 28815823 28815896 3'utr CG1646 FlyBase G46435.1 AGCCGGCAATGCAGATCGATTTCAGTGATCTTAGCACTCTGAATGACGAAGAGGTGGTCAGCATTAGGGACAGG 21 28815848 0.980065139 5 21 145 1 1.477121255 0.2 0.333333333 0.533333333 21 0 0 30 3R:28815823-28815896 6 CG1646 FBtr0113301 28814209 28817354 TGATCT 6mer3-8 dme-bantam-3p 3R + 28815832 28815874 3'utr CG1646 FlyBase G35040.1 TGCAGATCGATTTCAGTGATCTTAGCACTCTGAATGACGAAGA 16 28815848 0.807008032 2 15 123 1 1.447158031 0.214285714 0.4375 0.678571429 16 0 0 28 3R:28815832-28815874 6 15 4432 FBgn0039600 1138.88 36.74333333 56.61666667 0.013170835 0.408237322 0.264939653 0 0 0 0.01 dme-miR-305-5p 8mer-A1 AGTACAAA 3R 28816425 28816432 + 3R_28816425_28816432_+ 0.605654138 0.605654138 0.605654138 0 CG1646 FBtr0113301 28814209 28817354 3R + 28816410 28816460 3'utr CG1646 FlyBase G46437.1 AAGCACTATATAGAGAGTACAAAGAACAAGGGCATTGCCGGCAGTCTGGCC 16 28816420 0.694479659 4 10 44 0.65 1.113943352 0.15 0.25 0.4 16 7 0 13 3R:28816410-28816460 8 CG1646 FBtr0113301 28814209 28817354 AGTACAAA 8mer-A1 dme-miR-305-5p 3R + 28816408 28816458 3'utr CG1646 FlyBase G35042.1 ACAAGCACTATATAGAGAGTACAAAGAACAAGGGCATTGCCGGCAGTCTGG 16 28816419 0.948213182 5 10 46 0.666666667 0.903089987 0.25 0.375 0.583333333 16 7 1 16 3R:28816408-28816458 8 12 4433 FBgn0039600 1138.88 36.74333333 56.61666667 0.010536668 0.326589858 0.211951722 5 6 5.5 0.01 dme-bantam-3p 7mer-m8 TGATCTC 3R 28816496 28816502 + 3R_28816496_28816502_+ 0.661615243 0.661615243 0.661615243 0 CG1646 FBtr0113301 28814209 28817354 3R + 28816478 28816524 3'utr CG1646 FlyBase G46438.1 CCTCAATAAAATCTGTCATGATCTCGACGCCGGCTTGGCCGCCCTGC 71 28816496 0.711954305 7 63 410 0.880952381 1.86923172 0.392857143 0.169014085 0.297619048 71 10 0 74 3R:28816478-28816524 7 CG1646 FBtr0113301 28814209 28817354 TGATCTC 7mer-m8 dme-bantam-3p 3R + 28816472 28816551 3'utr CG1646 FlyBase G35043.1 CCGTTTCCTCAATAAAATCTGTCATGATCTCGACGCCGGCTTGGCCGCCCTGCAGCAGGCGCTGGAACGTGATCCAGCCA 46 28816496 0.987401779 9 45 254 0.985294118 1.826074803 0.323529412 0.282608696 0.514705882 46 1 0 67 3R:28816472-28816551 7 55 4434 FBgn0039600 1138.88 36.74333333 56.61666667 0.04829306 1.496870181 0.971445393 0 0 0 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3R 28816868 28816873 + 3R_28816868_28816873_+ 1 1 1 0 CG1646 FBtr0113301 28814209 28817354 3R + 28816855 28816892 3'utr CG1646 FlyBase G46439.1 AGTGATGGCAGTCCTAGTCGCAAAAACTCATCAAGCAG 6 28816865 0.923141336 4 6 18 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3R:28816855-28816892 6 CG1646 FBtr0113301 28814209 28817354 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3R + 28816855 28816884 3'utr CG1646 FlyBase G35044.1 AGTGATGGCAGTCCTAGTCGCAAAAACTCA 6 28816867 0.912319201 3 6 23 1 0.903089987 0 0.333333333 0.5 6 0 0 8 3R:28816855-28816884 6 5.5 4435 FBgn0039600 1138.88 36.74333333 56.61666667 0.004829306 0.149687018 0.097144539 3 1 2 0.01 dme-miR-33-5p 7mer-A1 AATGCAA 3R 28824625 28824631 - 3R_28824625_28824631_- 0.782911824 0.782911824 0.782911824 0 WASp FBtr0085354|FBtr0085352|FBtr0085353|FBtr0336768 28824504|28824504|28824504|28824504 28825449|28825449|28825449|28825449 3R - 28824606 28824665 3'utr WASp FlyBase G55426.1 CGCATAAGTATTTTCTTTTAGTTCGAGCGCATTTAATGCAAACTTGTAGTCATTTTTCTT 17 28824633 0.819089351 5 15 150 0.944444444 1.230448921 0.166666667 0.058823529 0.111111111 17 1 0 17 3R:28824606-28824665 7 WASp FBtr0085354|FBtr0085352|FBtr0085353|FBtr0336768 28824504|28824504|28824504|28824504 28825449|28825449|28825449|28825449 AATGCAA 7mer-A1 dme-miR-33-5p 3R - 28824593 28824650 3'utr WASp FlyBase G41841.1 TTTTAGTTCGAGCGCATTTAATGCAAACTTGTAGTCATTTTTCTTCTGTGTGTTTGTA 14 28824633 0.982650081 4 13 104 0.952380952 1.301029996 0.285714286 0.285714286 0.523809524 14 1 0 20 3R:28824593-28824650 7 13.5 4436 FBgn0024273 698.2566667 30.35666667 46.61666667 0.019333865 0.444712858 0.289595996 2 2 2 0.01 dme-miR-980-5p 8mer-m1 GAAAAACT 3R 28825026 28825033 - 3R_28825026_28825033_- 0.607906106 0.607906106 0.607906106 0 WASp FBtr0085354|FBtr0085352|FBtr0085353|FBtr0336768 28824504|28824504|28824504|28824504 28825449|28825449|28825449|28825449 3R - 28825012 28825056 3'utr WASp FlyBase G55428.1 AGAGATTCACCTTTAAGCGAACTGAAAAACTGTAAACTGAGCGAT 10 28825044 0.662980423 2 9 39 0.909090909 1 0 0.1 0.181818182 10 1 0 10 3R:28825012-28825056 8 WASp FBtr0085354|FBtr0085352|FBtr0085353|FBtr0336768 28824504|28824504|28824504|28824504 28825449|28825449|28825449|28825449 GAAAAACT 8mer-m1 dme-miR-980-5p 3R - 28825004 28825058 3'utr WASp FlyBase G41842.1 TTAGAGATTCACCTTTAAGCGAACTGAAAAACTGTAAACTGAGCGATAGAAATTT 6 28825044 0.925443937 5 6 27 1 1.204119983 0.125 0.833333333 0.9375 6 0 0 16 3R:28825004-28825058 8 8 4437 FBgn0024273 698.2566667 30.35666667 46.61666667 0.011457105 0.263533546 0.171612442 11 11 11 0.01 dme-miR-277-3p 6mer3-8 TGCATT 3R 28832457 28832462 - 3R_28832457_28832462_- 1 1 1 0 Apc FBtr0336767|FBtr0085351 28832299|28832299 28833234|28833234 3R - 28832411 28832511 3'utr Apc FlyBase G55433.1 TTTTATATAATTTAGCAAGTTAAGGGTAACTGTTTTAGGAAACAGCTTATGCATTAAGCTCATCATTTGCGACTTAGTTTTTACCGATTCAATGCGATTAA 32 28832445 0.990445001 12 30 306 0.972222222 1.544068044 0.027777778 0.125 0.222222222 32 1 0 35 3R:28832411-28832511 6 Apc FBtr0336767|FBtr0085351 28832299|28832299 28833234|28833234 TGCATT 6mer3-8 dme-miR-277-3p 3R - 28832422 28832513 3'utr Apc FlyBase G41845.1 TCTTTTATATAATTTAGCAAGTTAAGGGTAACTGTTTTAGGAAACAGCTTATGCATTAAGCTCATCATTTGCGACTTAGTTTTTACCGATTC 22 28832446 0.977625733 10 20 227 0.933333333 1.447158031 0.233333333 0.318181818 0.5 22 2 0 28 3R:28832422-28832513 6 14 4438 FBgn0015589 2286.833333 32.92333333 50.72 0.006122003 0.425230333 0.276025237 -17 -16 -16.5 0.01 dme-miR-932-5p 7mer-m8 GGAATTG 3R 28869896 28869902 + 3R_28869896_28869902_+ 0.70297287 0.70297287 0.70297287 0 spg FBtr0330304|FBtr0336766 28869617|28869062 28870439|28870439 3R + 28869873 28869981 3'utr spg FlyBase G46480.1 ATTTTATATATAATTTTTCACGGGGAATTGTCGCTAAAGTTACTAAGAAGAATGTTTAGATAAGAAAATAAAGATGAAATGATTTTTATATTGAAAGAGGATATCAAAT 31 28869901 0.918329685 11 27 239 0.882352941 1.477121255 0.058823529 0.096774194 0.176470588 31 4 0 30 3R:28869873-28869981 7 spg FBtr0336766|FBtr0330304 28869062|28869617 28870439|28870439 GGAATTG 7mer-m8 dme-miR-932-5p 3R + 28869873 28869959 3'utr spg FlyBase G35071.1 ATTTTATATATAATTTTTCACGGGGAATTGTCGCTAAAGTTACTAAGAAGAATGTTTAGATAAGAAAATAAAGATGAAATGATTTTT 17 28869900 0.984116813 7 15 123 0.892857143 1.397940009 0.035714286 0.352941176 0.607142857 17 3 0 25 3R:28869873-28869959 7 15 4439 FBgn0264324 552.3333333 8.306666667 12.79 0.027157514 1.805778491 1.172791243 -5 -4 -4.5 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 3R 28870177 28870182 + 3R_28870177_28870182_+ 0.999999388 1 0.999999694 4.24E-07 spg FBtr0330304|FBtr0336766 28869617|28869062 28870439|28870439 3R + 28870143 28870194 3'utr spg FlyBase G46482.1 ATGCGAACGGCAATTAGGAATTTTAAAGTGCTACTAGCTTCATAACGAATCA 16 28870164 0.975066441 9 15 111 0.952380952 1 0.095238095 0.25 0.428571429 16 0 1 20 3R:28870143-28870194 6 spg FBtr0336766|FBtr0330304 28869062|28869617 28870439|28870439 TAGCTT 6mer3-8 dme-miR-79-3p 3R + 28870156 28870190 3'utr spg FlyBase G35073.1 TTAGGAATTTTAAAGTGCTACTAGCTTCATAACGA 5 28870165 0.767774407 4 4 39 0.857142857 0.77815125 0.142857143 0.4 0.571428571 5 1 0 6 3R:28870156-28870190 6 9 4440 FBgn0264324 552.3333333 8.306666667 12.79 0.016294508 1.083467095 0.703674746 13 12 12.5 0.01 dme-miR-7-5p 6mer3-8 GTCTTC 3R 28870244 28870249 + 3R_28870244_28870249_+ 0.999999999 0.999999998 0.999999998 0 spg FBtr0330304|FBtr0336766 28869617|28869062 28870439|28870439 3R + 28870243 28870291 3'utr spg FlyBase G46483.1 AGTCTTCATACATGTATGTATCTGAATATACTATAAAGCGCGCATTAAT 63 28870259 0.825535359 6 61 520 0.975 1.892094603 0.075 0.222222222 0.3875 63 2 0 78 3R:28870243-28870291 6 spg FBtr0336766|FBtr0330304 28869062|28869617 28870439|28870439 GTCTTC 6mer3-8 dme-miR-7-5p 3R + 28870243 28870317 3'utr spg FlyBase G35074.1 AGTCTTCATACATGTATGTATCTGAATATACTATAAAGCGCGCATTAATCAAAAGCGTTGAACTCGTATTTAAAC 39 28870259 0.962982239 6 38 297 0.983050847 1.763427994 0.06779661 0.384615385 0.593220339 39 1 0 58 3R:28870243-28870317 6 10 4441 FBgn0264324 552.3333333 8.306666667 12.79 0.018105009 1.203852327 0.781860829 -15 -15 -15 0.01 dme-miR-31a-5p 6mer3-8 TCTTGC 3R 28921833 28921838 + 3R_28921833_28921838_+ 1 1 1 0 Doa FBtr0299742|FBtr0299749|FBtr0299748|FBtr0308600|FBtr0308599|FBtr0336461|FBtr0299747|FBtr0299744|FBtr0299753|FBtr0299743|FBtr0299752|FBtr0299751|FBtr0299745|FBtr0308598|FBtr0299750 28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741 28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28921965|28922772|28921965|28922772|28921965 3R + 28921794 28921840 3'utr Doa FlyBase G46524.1 CTCATGCAAACATACACTCAAGGCAGTCGTCCAGCAACGTCTTGCAC 8 28921834 0.935135252 3 7 29 0.888888889 0.903089987 0 0.125 0.222222222 8 1 0 8 3R:28921794-28921840 6 Doa FBtr0308598|FBtr0299751|FBtr0299750|FBtr0299752|FBtr0299745|FBtr0299749|FBtr0299747|FBtr0308599|FBtr0299753|FBtr0299744|FBtr0299742|FBtr0299748|FBtr0299743|FBtr0308600|FBtr0336461 28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741 28922772|28922772|28921965|28921965|28921965|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772 TCTTGC 6mer3-8 dme-miR-31a-5p 3R + 28921809 28921858 3'utr Doa FlyBase G35107.1 ACTCAAGGCAGTCGTCCAGCAACGTCTTGCACCCGACTCGTAGAGTAGAC 5 28921835 0.938897014 4 4 17 1 0.954242509 0 0.6 0.777777778 5 0 0 9 3R:28921809-28921858 6 4.5 4442 FBgn0265998 2384.633333 84.60666667 129.7833333 0.001887083 0.053187298 0.034673173 -1 -2 -1.5 0.01 dme-miR-1003-3p 6mer2-7 TGTGAG 3R 28922644 28922649 + 3R_28922644_28922649_+ 1 1 1 0 Doa FBtr0299742|FBtr0299749|FBtr0299748|FBtr0308600|FBtr0308599|FBtr0336461|FBtr0299747|FBtr0299744|FBtr0299753|FBtr0299743|FBtr0299751|FBtr0308598 28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741 28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772 3R + 28922610 28922673 3'utr Doa FlyBase G46530.1 TTGAATATACTTATACATACTTAATTCAAATGATTGTGAGTTAGTTTAATATTACATAAATATT 210 28922650 0.793700763 12 207 2066 0.988142292 1.920818754 0.098814229 0.185714286 0.324110672 210 1 2 250 3R:28922610-28922673 6 Doa FBtr0308598|FBtr0299751|FBtr0299749|FBtr0299747|FBtr0308599|FBtr0299753|FBtr0299744|FBtr0299742|FBtr0299748|FBtr0299743|FBtr0308600|FBtr0336461 28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741 28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772 TGTGAG 6mer2-7 dme-miR-1003-3p 3R + 28922608 28922674 3'utr Doa FlyBase G35111.1 AATTGAATATACTTATACATACTTAATTCAAATGATTGTGAGTTAGTTTAATATTACATAAATATTA 149 28922650 0.989349201 6 147 1418 0.981651376 1.728353782 0.077981651 0.342281879 0.550458716 149 1 3 214 3R:28922608-28922674 6 178 4443 FBgn0265998 2384.633333 84.60666667 129.7833333 0.074644599 2.103853124 1.37151663 -6 -6 -6 0.01 dme-miR-8-3p 7mer-m8 CAGTATT 3R 29032937 29032943 - 3R_29032937_29032943_- 0.661615243 0.661615243 0.661615243 0 beta4GalNAcTB FBtr0085419 29032658 29032947 3R - 29032925 29032970 stop_codon beta4GalNAcTB FlyBase G55486.1 CGCACATCCTGGTTGATACCTGAGTGCCAGTATTTGTTATTGTATT 40 29032946 0.940802947 3 40 415 1 1.653212514 0.377777778 0.125 0.222222222 40 0 0 45 3R:29032925-29032970 7 beta4GalNAcTB FBtr0085419 29032658 29032947 CAGTATT 7mer-m8 dme-miR-8-3p 3R - 29032930 29032967 stop_codon beta4GalNAcTB FlyBase G41873.1 ACATCCTGGTTGATACCTGAGTGCCAGTATTTGTTATT 19 29032946 0.934832887 2 19 200 1 1.579783597 0.394736842 0.789473684 0.894736842 19 0 0 38 3R:29032930-29032967 7 29.5 4444 FBgn0039625 119.31 10.86333333 16.56333333 0.24725505 2.715556919 1.781042463 3 3 3 0.01 dme-miR-1006-3p 6mer3-8 CGAATT 3R 29046296 29046301 + 3R_29046296_29046301_+ 0.507200502 0.507200502 0.507200502 0 Pkc98E FBtr0085359|FBtr0339149|FBtr0339150|FBtr0301516 29046223|29046223|29046223|29046223 29049148|29047034|29047034|29047034 3R + 29046274 29046317 3'utr Pkc98E FlyBase G46551.1 TGCGGTCGTCTGGAGCCCCGGTCGAATTGGGGGTGGCCCAAGTC 9 29046300 0.917638104 3 8 30 1 1.146128036 0.071428571 0.333333333 0.571428571 9 0 0 14 3R:29046274-29046317 6 Pkc98E FBtr0339150|FBtr0301516|FBtr0085359|FBtr0339149 29046223|29046223|29046223|29046223 29047034|29047034|29049148|29047034 CGAATT 6mer3-8 dme-miR-1006-3p 3R + 29046265 29046312 3'utr Pkc98E FlyBase G35120.1 GGATTGCGATGCGGTCGTCTGGAGCCCCGGTCGAATTGGGGGTGGCCC 5 29046300 0.953819387 3 4 19 0.833333333 0.698970004 0 0.2 0.333333333 5 1 0 5 3R:29046265-29046312 6 6.5 4445 FBgn0003093 985.62 22.17 34.02333333 0.006594834 0.293188994 0.191045361 -4 -4 -4 0.01 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 29046686 29046693 + 3R_29046686_29046693_+ 0.626472163 0.625894584 0.626183373 0.000408425 Pkc98E FBtr0085359|FBtr0339149|FBtr0339150|FBtr0301516 29046223|29046223|29046223|29046223 29049148|29047034|29047034|29047034 3R + 29046657 29046718 3'utr Pkc98E FlyBase G46554.1 AAGAAAGAAGGAAGAGATACCCCCACCCATCTAGTCAATGCCCAGTGGCTGAGTGCATTTTG 85 29046686 0.958026863 8 78 359 0.928571429 1.959041392 0.224489796 0.141176471 0.255102041 85 7 0 91 3R:29046657-29046718 8 Pkc98E FBtr0339150|FBtr0301516|FBtr0085359|FBtr0339149 29046223|29046223|29046223|29046223 29047034|29047034|29049148|29047034 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 29046660 29046729 3'utr Pkc98E FlyBase G35122.1 AAAGAAGGAAGAGATACCCCCACCCATCTAGTCAATGCCCAGTGGCTGAGTGCATTTTGTTATTAGTTAT 61 29046686 0.929056765 9 55 287 0.925531915 1.638489257 0.329787234 0.393442623 0.606382979 61 6 1 87 3R:29046660-29046729 8 66 4446 FBgn0003093 985.62 22.17 34.02333333 0.066962927 2.97699594 1.939845204 0 0 0 0.01 dme-miR-8-3p 7mer-A1 AGTATTA 3R 29046965 29046971 + 3R_29046965_29046971_+ 0.823349562 0.823349562 0.823349562 0 Pkc98E FBtr0085359|FBtr0339149|FBtr0339150|FBtr0301516 29046223|29046223|29046223|29046223 29049148|29047034|29047034|29047034 3R + 29046945 29046992 3'utr Pkc98E FlyBase G46555.1 CTTGCACAACTTCCTTCTCAAGTATTAAAGCGATATTATTTTAAAGTT 12 29046961 0.908393151 7 8 103 0.769230769 0.698970004 0.307692308 0.083333333 0.153846154 12 2 1 10 3R:29046945-29046992 7 Pkc98E FBtr0339150|FBtr0301516|FBtr0085359|FBtr0339149 29046223|29046223|29046223|29046223 29047034|29047034|29049148|29047034 AGTATTA 7mer-A1 dme-miR-8-3p 3R + 29046894 29047002 3'utr Pkc98E FlyBase G35123.1 AATACATGCGACCACACGGATCTAGTTTCATTTGTTTTACATATTCGAAATCTTGCACAACTTCCTTCTCAAGTATTAAAGCGATATTATTTTAAAGTTACCTTATTGT 15 29046961 0.992828398 11 13 141 0.826086957 1.278753601 0.086956522 0.4 0.608695652 15 4 0 19 3R:29046894-29047002 7 8 4447 FBgn0003093 985.62 22.17 34.02333333 0.008116718 0.360847993 0.235132752 4 4 4 0.01 dme-miR-305-5p 7mer-m1 GTACAAT 3R 29050677 29050683 + 3R_29050677_29050683_+ 0.765586663 0.765586663 0.765586663 0 CG11837 FBtr0085360 29050645 29050721 3R + 29050662 29050693 3'utr CG11837 FlyBase G46562.1 AGATCGTTAAACTTTGTACAATTTACCAACAT 8 29050675 0.626237893 4 8 70 1 0.903089987 0 0 0 8 0 0 8 3R:29050662-29050693 7 CG11837 FBtr0085360 29050645 29050721 GTACAAT 7mer-m1 dme-miR-305-5p 3R + 29050657 29050694 3'utr CG11837 FlyBase G35126.1 TCTATAGATCGTTAAACTTTGTACAATTTACCAACATT 9 29050683 0.596077959 4 9 72 1 1.113943352 0 0.333333333 0.538461538 9 0 0 13 3R:29050657-29050694 7 8 4448 FBgn0039627 323 36.6 56.57333333 0.024767802 0.218579235 0.14140938 2 -6 -2 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 29058766 29058771 + 3R_29058766_29058771_+ 0.998730487 1 0.999365243 0.000897672 Sirt7 FBtr0085364 29058678 29059204 3R + 29058723 29058791 3'utr Sirt7 FlyBase G46565.1 GGTGAAATGATTACCCTTGAGTCAATGGCTTTTTGGAAACGTTTGATCTTATACTTGATATGAAGGAGC 22 29058774 0.854690217 10 22 177 1 1.431363764 0.296296296 0.181818182 0.333333333 22 0 0 27 3R:29058723-29058791 6 Sirt7 FBtr0085364 29058678 29059204 TGATCT 6mer3-8 dme-bantam-3p 3R + 29058690 29058779 3'utr Sirt7 FlyBase G35128.1 ATGTACGGCCGTGATTCCTCCCTAAGATAAGAAGGTGAAATGATTACCCTTGAGTCAATGGCTTTTTGGAAACGTTTGATCTTATACTTG 23 29058765 0.987055649 12 21 181 0.90625 1.462397998 0.125 0.347826087 0.53125 23 3 0 29 3R:29058690-29058779 6 14 4449 FBgn0039631 118 4.676666667 7.163333333 0.118644068 2.993585175 1.954397394 -8 1 -3.5 0.01 dme-miR-8-3p 6mer2-7 AGTATT 3R 29058855 29058860 + 3R_29058855_29058860_+ 1 1 1 0 Sirt7 FBtr0085364 29058678 29059204 3R + 29058820 29058873 3'utr Sirt7 FlyBase G46566.1 GACCTGCCCTCACCGAGACATATGCTCGCTTCAATAGTATTTTAGCTATAGGTT 8 29058861 0.990437832 4 7 71 0.888888889 0.602059991 0.111111111 0.125 0.222222222 8 0 1 8 3R:29058820-29058873 6 Sirt7 FBtr0085364 29058678 29059204 AGTATT 6mer2-7 dme-miR-8-3p 3R + 29058796 29058874 3'utr Sirt7 FlyBase G35129.1 TGTTTCTTTTCTACGGAAAAGATCGACCTGCCCTCACCGAGACATATGCTCGCTTCAATAGTATTTTAGCTATAGGTTT 10 29058861 0.987003804 5 10 84 1 1.230448921 0 0.4 0.647058824 10 0 0 17 3R:29058796-29058874 6 5.5 4450 FBgn0039631 118 4.676666667 7.163333333 0.046610169 1.176051319 0.767798976 -6 -6 -6 0.01 dme-miR-980-3p 6mer3-8 GGCAGC 3R 29059718 29059723 - 3R_29059718_29059723_- 1 1 1 0 Cul5 FBtr0085417 29059270 29059952 3R - 29059680 29059744 3'utr Cul5 FlyBase G55498.1 TAAAAGACCCACACTCCAATCGGCAGCCATTTTCTCGTGTCCACGTCCTGTATTTGTGAAACTTT 43 29059725 0.931828011 7 42 222 0.980769231 1.707570176 0.096153846 0.186046512 0.326923077 43 1 0 51 3R:29059680-29059744 6 Cul5 FBtr0085417 29059270 29059952 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 29059710 29059744 3'utr Cul5 FlyBase G41879.2 TAAAAGACCCACACTCCAATCGGCAGCCATTTTCT 15 29059725 0.966945703 3 13 62 0.952380952 1.301029996 0.047619048 0.266666667 0.476190476 15 1 0 20 3R:29059710-29059744 6 27 4451 FBgn0039632 438.4633333 15.78333333 23.95 0.061578695 1.710665259 1.127348643 2 2 2 0.01 dme-miR-980-5p 7mer-m1 AAAAACT 3R 29059867 29059873 - 3R_29059867_29059873_- 0.765586663 0.765586663 0.765586663 0 Cul5 FBtr0085417 29059270 29059952 3R - 29059836 29059948 3'utr Cul5 FlyBase G55500.1 CTGCTCCTGATCCCGGCTCTAGTCTCAGTCCCGTCTATGCAGTCATTCCCATTTCCATTCCCTCACACGCTACTCAAAAACTATTGCGATTTTAATCTCAACGCCGACGTGCT 27 29059858 0.979738031 11 27 192 1 1.477121255 0.133333333 0.111111111 0.2 27 0 0 30 3R:29059836-29059948 7 Cul5 FBtr0085417 29059270 29059952 AAAAACT 7mer-m1 dme-miR-980-5p 3R - 29059814 29059962 stop_codon Cul5 FlyBase G41880.1 CGTGGCCTAAGCAGCTGCTCCTGATCCCGGCTCTAGTCTCAGTCCCGTCTATGCAGTCATTCCCATTTCCATTCCCTCACACGCTACTCAAAAACTATTGCGATTTTAATCTCAACGCCGACGTGCTCAAAGCACGCGCCCTTTTTCTG 18 29059858 0.986635598 12 13 112 0.78125 1.096910013 0.25 0.333333333 0.625 18 6 1 25 3R:29059814-29059962 7 7 4452 FBgn0039632 438.4633333 15.78333333 23.95 0.015964847 0.443505808 0.292275574 -15 -15 -15 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 3R 29107986 29107991 + 3R_29107986_29107991_+ 0.9999804 1 0.9999902 1.39E-05 CG11873 FBtr0330299|FBtr0330301|FBtr0330300 29106782|29106701|29106701 29108948|29108948|29108948 3R + 29107907 29108004 3'utr CG11873 FlyBase G46587.1 GAATCGTATCAATTGTATCTCGATCTTGCGACAAATCTGACTTGTGATTTGTGCCACGTTTTAAATATAGATGTCTGATTAGCTTGTAAACATACATA 57 29107956 0.719318283 17 55 487 0.970588235 1.819543936 0.191176471 0.192982456 0.323529412 57 2 0 66 3R:29107907-29108004 6 CG11873 FBtr0330300|FBtr0330301|FBtr0330299 29106701|29106701|29106782 29108948|29108948|29108948 TAGCTT 6mer3-8 dme-miR-79-3p 3R + 29107907 29108003 3'utr CG11873 FlyBase G35141.1 GAATCGTATCAATTGTATCTCGATCTTGCGACAAATCTGACTTGTGATTTGTGCCACGTTTTAAATATAGATGTCTGATTAGCTTGTAAACATACAT 40 29107986 0.705881839 13 37 331 0.916666667 1.740362689 0.183333333 0.4 0.6 40 5 0 55 3R:29107907-29108003 6 24 4453 FBgn0039633 879.82 9.466666667 14.51 0.027278307 2.535211268 1.654031702 30 0 15 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 29108426 29108431 + 3R_29108426_29108431_+ 1 1 1 0 CG11873 FBtr0330299|FBtr0330301|FBtr0330300 29106782|29106701|29106701 29108948|29108948|29108948 3R + 29108410 29108443 3'utr CG11873 FlyBase G46588.1 TCCCGTGTGAGTTGCATGATCTTGTATTTCTATT 12 29108426 0.831970843 2 11 108 1 1.146128036 0 0.181818182 0.357142857 11 0 0 14 3R:29108410-29108443 6 CG11873 FBtr0330300|FBtr0330301|FBtr0330299 29106701|29106701|29106782 29108948|29108948|29108948 TGATCT 6mer3-8 dme-bantam-3p 3R + 29108395 29108437 3'utr CG11873 FlyBase G35142.1 CCCACCTGCCTAGCGTCCCGTGTGAGTTGCATGATCTTGTATT 9 29108426 0.98706224 3 9 71 1 1.176091259 0.066666667 0.444444444 0.666666667 9 0 0 15 3R:29108395-29108437 6 9.5 4454 FBgn0039633 879.82 9.466666667 14.51 0.010797663 1.003521127 0.654720882 0 0 0 0.01 dme-miR-184-5p 6mer3-8 TGATAA 3R 29109378 29109383 - 3R_29109378_29109383_- 1 1 1 0 alpha-Man-Ib FBtr0085416 29109051 29109880 3R - 29109362 29109407 3'utr alpha-Man-Ib FlyBase G55513.1 TCGATTGTATAATATTCTGTGTACTGATAATTGTTATTTTGTAATT 24 29109390 0.643471361 6 23 257 1 1.397940009 0.08 0.041666667 0.08 24 0 0 25 3R:29109362-29109407 6 alpha-Man-Ib FBtr0085416 29109051 29109880 TGATAA 6mer3-8 dme-miR-184-5p 3R - 29109367 29109399 3'utr alpha-Man-Ib FlyBase G41889.1 ATAATATTCTGTGTACTGATAATTGTTATTTTG 13 29109387 0.695193212 6 11 155 0.863636364 1.278753601 0 0.461538462 0.681818182 13 3 0 19 3R:29109367-29109399 6 18 4455 FBgn0039634 927.67 35.07666667 53.86333333 0.019403452 0.513161646 0.334179095 7 4 5.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 29118536 29118541 - 3R_29118536_29118541_- 1 1 1 0 yem FBtr0085415|FBtr0330292 29118328|29118328 29118881|29118584 3R - 29118496 29118561 3'utr yem FlyBase G55527.1 TTGCGATTCTAATCTAAGATTCTAGTGCTGATTCTAGGTAGGTTTCATTCGCAGCTGTGTCTGCCG 6 29118533 0.992335863 5 5 59 1 0.903089987 0 0.333333333 0.5 6 0 0 8 3R:29118496-29118561 6 yem FBtr0085415|FBtr0330292 29118328|29118328 29118881|29118584 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R - 29118502 29118557 3'utr yem FlyBase G41897.1 GATTCTAATCTAAGATTCTAGTGCTGATTCTAGGTAGGTTTCATTCGCAGCTGTGT 10 29118541 0.990213146 6 10 91 1 1.113943352 0.153846154 0.3 0.461538462 10 0 0 13 3R:29118502-29118557 6 6.5 4456 FBgn0005596 782.6666667 22.29666667 34.15 0.00830494 0.291523397 0.19033675 -8 0 -4 0.01 dme-miR-184-3p 6mer3-8 TCCGTC 3R 29118741 29118746 - 3R_29118741_29118746_- 0.999999989 1 0.999999995 0 yem FBtr0085415 29118328 29118881 3R - 29118665 29118787 3'utr yem FlyBase G55529.1 TGAGCCACGCCTCGCCGCGCTACGACCTGCTGGCCAACGGCTCCGTCTCCATGTCCGCCGCCCAGGTGGGAGCCTCTGCCAACACACTGCCACAAGTATTCGTTAAACCCAGCCTGCCGCAGC 16 29118757 0.906379839 9 15 54 0.95 0.977723605 0.2 0.1875 0.35 16 0 1 19 3R:29118665-29118787 6 yem FBtr0085415 29118328 29118881 TCCGTC 6mer3-8 dme-miR-184-3p 3R - 29118743 29118789 3'utr yem FlyBase G41899.1 GATGAGCCACGCCTCGCCGCGCTACGACCTGCTGGCCAACGGCTCCG 5 29118758 0.934452199 2 3 14 0.625 0.698970004 0.25 0.4 0.625 5 3 0 5 3R:29118743-29118789 3 1.5 4457 FBgn0005596 782.6666667 22.29666667 34.15 0.001916525 0.06727463 0.043923865 11 12 11.5 0.01 dme-miR-12-5p 7mer-m8 AATACTC 3R 29128017 29128023 + 3R_29128017_29128023_+ 0.67451515 0.67451515 0.67451515 0 CG11880 FBtr0085373|FBtr0085372|FBtr0085371 29127872|29127872|29127872 29128247|29128247|29128247 3R + 29127998 29128078 3'utr CG11880 FlyBase G46615.2 AAATGCACGCTCCTTTGCCAATACTCTTAATCTTTAATCTAGTGTATATAATACGCCAGTATCCGTATCCATATGTAAAGT 16 29128023 0.736484519 11 16 105 1 1.301029996 0.05 0.25 0.4 16 0 0 20 3R:29127998-29128078 7 CG11880 FBtr0085371|FBtr0085372|FBtr0085373 29127872|29127872|29127872 29128247|29128247|29128247 AATACTC 7mer-m8 dme-miR-12-5p 3R + 29127917 29128026 3'utr CG11880 FlyBase G35160.1 ATATATATATTTATTATAGCCCAAAACGAAACGATCGGGGTTGTGAGCGATTGCTCAACCGGCTGCAATTGGGTTTGCATTAAATGCACGCTCCTTTGCCAATACTCTTA 16 29128011 0.976171383 10 16 103 1 1.414973348 0.038461538 0.5 0.692307692 16 0 0 26 3R:29127917-29128026 7 7 4458 FBgn0039637 1219.17 46.03333333 70.26333333 0.005741611 0.152063722 0.099625219 -6 6 0 0.01 dme-miR-190-5p 6mer3-8 ACATAT 3R 29137795 29137800 + 3R_29137795_29137800_+ 0.72305289 0.885654428 0.804353659 0.114976623 Vha100-1 FBtr0301651|FBtr0085376|FBtr0085381|FBtr0301650|FBtr0335405|FBtr0085380|FBtr0085375|FBtr0085379|FBtr0085374|FBtr0085377 29137685|29137685|29137685|29137685|29137685|29137685|29137685|29137685|29137685|29137685 29137975|29137980|29137980|29137975|29137975|29137980|29137980|29137980|29137975|29137975 3R + 29137702 29137800 3'utr Vha100-1 FlyBase G46631.1 GGTCAGAGCAACAACCAAAGCACGTTGAGAGTCTCATTGCGTTATATGAAATTAACTATCCAAATAAGTGGAATCTACCAGTTACAGTAACAAACATAT 61 29137783 0.960927082 8 61 302 1 1.826074803 0.074626866 0.081967213 0.164179104 61 0 0 67 3R:29137702-29137800 6 Vha100-1 FBtr0085377|FBtr0085374|FBtr0085379|FBtr0085375|FBtr0085380|FBtr0335405|FBtr0301650|FBtr0085381|FBtr0085376|FBtr0301651 29137685|29137685|29137685|29137685|29137685|29137685|29137685|29137685|29137685|29137685 29137975|29137975|29137980|29137980|29137980|29137975|29137975|29137980|29137980|29137975 ACATAT 6mer3-8 dme-miR-190-5p 3R + 29137767 29137805 3'utr Vha100-1 FlyBase G35176.1 AAGTGGAATCTACCAGTTACAGTAACAAACATATATGTA 29 29137783 0.789402442 2 29 146 1 1.602059991 0 0.310344828 0.5 29 0 0 40 3R:29137767-29137805 6 27.5 4459 FBgn0028671 1140.006667 46.83 71.55 0.024122666 0.587230408 0.384346611 12 12 12 0.01 dme-miR-980-3p 6mer2-7 GCAGCT 3R 29145551 29145556 + 3R_29145551_29145556_+ 0.9999999 1 0.99999995 7.07E-08 CG14516 FBtr0085383|FBtr0085382|FBtr0335406 29145497|29145497|29145497 29145787|29145787|29145787 3R + 29145540 29145594 3'utr CG14516 FlyBase G46650.1 TATTAGATTTCGCAGCTGCAACTGCATGGGTTGGGCCACCAATGCATTTATGTGT 14 29145548 0.76462622 7 13 99 0.941176471 0.903089987 0.352941176 0.214285714 0.352941176 14 0 1 16 3R:29145540-29145594 6 CG14516 FBtr0335406|FBtr0085382|FBtr0085383 29145497|29145497|29145497 29145787|29145787|29145787 GCAGCT 6mer2-7 dme-miR-980-3p 3R + 29145506 29145561 3'utr CG14516 FlyBase G35186.1 ATTCTGCGGCTTGGCTGGATCAAGGCTGCAGCAGTATTAGATTTCGCAGCTGCAAC 6 29145548 0.969068283 4 6 35 1 1.113943352 0.307692308 0.5 0.769230769 6 0 0 13 3R:29145506-29145561 6 3.5 4460 FBgn0039640 168.03 5.77 8.72 0.020829614 0.606585789 0.401376147 3 3 3 0.01 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 29145582 29145589 + 3R_29145582_29145589_+ 0.625364269 0.625364269 0.625364269 0 CG14516 FBtr0085383|FBtr0085382|FBtr0335406 29145497|29145497|29145497 29145787|29145787|29145787 3R + 29145540 29145594 3'utr CG14516 FlyBase G46650.1 TATTAGATTTCGCAGCTGCAACTGCATGGGTTGGGCCACCAATGCATTTATGTGT 14 29145582 0.76462622 7 13 99 0.941176471 0.903089987 0.352941176 0.214285714 0.352941176 14 0 1 16 3R:29145540-29145594 8 CG14516 FBtr0335406|FBtr0085382|FBtr0085383 29145497|29145497|29145497 29145787|29145787|29145787 TGCATTTA 8mer-A1 dme-miR-277-3p 3R + 29145567 29145601 3'utr CG14516 FlyBase G35187.1 GGGTTGGGCCACCAATGCATTTATGTGTAATATTT 6 29145587 0.736312023 4 6 42 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3R:29145567-29145601 8 7.5 4461 FBgn0039640 168.03 5.77 8.72 0.044634887 1.29982669 0.860091743 0 -5 -2.5 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 29145737 29145744 + 3R_29145737_29145744_+ 0.500120318 0.500120318 0.500120318 0 CG14516 FBtr0085383|FBtr0085382|FBtr0335406 29145497|29145497|29145497 29145787|29145787|29145787 3R + 29145634 29145791 3'utr CG14516 FlyBase G46651.2 AAGAGAGAAAGCCCTTGGCAGATCGTCCAGAGCATCACGTTTTTCATTACTTTTAATGTATGCCTTCTTTTCATAACAATTATGAGTCTTGTAATTTTAATTTGTACTTAAATGTAATTGTAAATGTAAATGGAATTATAACATTGTTCGTCACAAAA 53 29145716 0.990092391 22 51 496 0.967213115 1.770852012 0.245901639 0.132075472 0.245901639 53 2 0 59 3R:29145634-29145791 8 CG14516 FBtr0335406|FBtr0085382|FBtr0085383 29145497|29145497|29145497 29145787|29145787|29145787 GTACTTAA 8mer-A1 dme-miR-252-5p 3R + 29145704 29145760 3'utr CG14516 FlyBase G35188.1 TCATAACAATTATGAGTCTTGTAATTTTAATTTGTACTTAAATGTAATTGTAAATGT 11 29145716 0.790802347 5 10 117 0.928571429 1.113943352 0.142857143 0.272727273 0.428571429 11 1 0 13 3R:29145704-29145760 8 13.5 4462 FBgn0039640 168.03 5.77 8.72 0.080342796 2.339688042 1.548165138 21 21 21 0.01 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3R 29147104 29147109 - 3R_29147104_29147109_- 1 1 1 0 CG11882 FBtr0335407|FBtr0085411 29147014|29147014 29147192|29147192 3R - 29147080 29147136 3'utr CG11882 FlyBase G55548.1 TATTTTGTAATTGTTGTAAAAGACTGTTGGTGCGAATATTTCGAATGTGATTAGGCA 71 29147110 0.839739369 7 68 501 0.966292135 1.457377197 0.325842697 0.197183099 0.359550562 71 1 2 86 3R:29147080-29147136 6 CG11882 FBtr0085411|FBtr0335407 29147014|29147014 29147192|29147192 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3R - 29147080 29147140 3'utr CG11882 FlyBase G41917.1 ATTGTATTTTGTAATTGTTGTAAAAGACTGTTGGTGCGAATATTTCGAATGTGATTAGGCA 51 29147110 0.98323519 10 49 372 0.971830986 1.838849091 0.295774648 0.294117647 0.492957746 51 2 0 69 3R:29147080-29147140 6 59.5 4463 FBgn0039642 68.66666667 8.353333333 12.70666667 0.866504854 7.122905028 4.682581322 1 1 1 0.01 dme-miR-965-3p 7mer-m8 TACGCTT 3R 29149797 29149803 + 3R_29149797_29149803_+ 0.620204855 0.620204855 0.620204855 0 Pglym78 FBtr0100483|FBtr0100482|FBtr0085384 29149734|29149734|29149734 29149901|29149901|29149901 3R + 29149739 29149869 3'utr Pglym78 FlyBase G46655.1 CGCAGGCCACACCTCATGAGAATCCACTCAAATACGGCACAAGTCAGAGCATTCTGATTACGCTTCTGTTCAAGATGTAGCCAATCCCATTCGTTGTTGTTGTTCGCGTAGCAGTAATTGGTTCATCCCCA 70 29149796 0.986152669 14 68 579 0.987951807 1.913813852 0.409638554 0.157142857 0.289156627 70 1 0 82 3R:29149739-29149869 7 Pglym78 FBtr0085384|FBtr0100482|FBtr0100483 29149734|29149734|29149734 29149901|29149901|29149901 TACGCTT 7mer-m8 dme-miR-965-3p 3R + 29149742 29149846 3'utr Pglym78 FlyBase G35189.1 AGGCCACACCTCATGAGAATCCACTCAAATACGGCACAAGTCAGAGCATTCTGATTACGCTTCTGTTCAAGATGTAGCCAATCCCATTCGTTGTTGTTGTTCGCG 33 29149797 0.986685174 8 31 258 0.963636364 1.247154615 0.309090909 0.40625 0.654545455 32 0 2 53 3R:29149742-29149846 7 41 4464 FBgn0014869 753.3333333 91.53 139.47 0.054424779 0.447940566 0.293970029 1 0 0.5 0.01 dme-miR-8-3p 7mer-A1 AGTATTA 3R 29164609 29164615 + 3R_29164609_29164615_+ 0.823349562 0.823349562 0.823349562 0 CG11897 FBtr0085386|FBtr0085387 29164548|29164548 29164966|29164966 3R + 29164563 29164625 3'utr CG11897 FlyBase G46685.1 TCATCTACTTGTAGATTTGCTTAAGGTTTAGATCATAAGAACTGAAAGTATTATGTACATAGC 24 29164598 0.979632951 6 22 159 0.90625 1.161368002 0.0625 0.291666667 0.46875 24 2 1 29 3R:29164563-29164625 7 CG11897 FBtr0085387|FBtr0085386 29164548|29164548 29164966|29164966 AGTATTA 7mer-A1 dme-miR-8-3p 3R + 29164562 29164624 3'utr CG11897 FlyBase G35211.1 CTCATCTACTTGTAGATTTGCTTAAGGTTTAGATCATAAGAACTGAAAGTATTATGTACATAG 23 29164598 0.979230709 7 22 154 0.967741935 1.176091259 0.419354839 0.347826087 0.516129032 23 0 1 30 3R:29164562-29164624 7 20.5 4465 FBgn0039644 385.6666667 9.473333333 14.69333333 0.05315471 2.163969036 1.395190563 11 11 11 0.01 dme-miR-252-5p 7mer-m8 GTACTTA 3R 29164664 29164670 + 3R_29164664_29164670_+ 0.588299917 0.588299917 0.588299917 0 CG11897 FBtr0085386|FBtr0085387 29164548|29164548 29164966|29164966 3R + 29164643 29164687 3'utr CG11897 FlyBase G46686.1 TAACGAAATACCTATTGCCTTGTACTTACGGAATATTTGTAAGCT 18 29164662 0.690893157 5 17 133 1 1.301029996 0.15 0.111111111 0.2 18 0 0 20 3R:29164643-29164687 7 CG11897 FBtr0085387|FBtr0085386 29164548|29164548 29164966|29164966 GTACTTA 7mer-m8 dme-miR-252-5p 3R + 29164641 29164676 3'utr CG11897 FlyBase G35212.1 GCTAACGAAATACCTATTGCCTTGTACTTACGGAAT 14 29164658 0.697929763 3 10 92 0.818181818 0.77815125 0.045454545 0.428571429 0.636363636 14 2 2 18 3R:29164641-29164676 7 13.5 4466 FBgn0039644 385.6666667 9.473333333 14.69333333 0.035004322 1.42505278 0.918784029 2 6 4 0.01 dme-miR-252-5p 6mer3-8 GTACTT 3R 29164864 29164869 + 3R_29164864_29164869_+ 1 1 1 0 CG11897 FBtr0085386|FBtr0085387 29164548|29164548 29164966|29164966 3R + 29164794 29164877 3'utr CG11897 FlyBase G46688.1 GAAAGCAATTCGCAAACGCCGTGCACAAATCAGAGCAAGTTCAATTAAACGAAGACAAATAGTGATTTAGGTACTTTTTTAAAA 55 29164860 0.975444232 5 54 340 0.984615385 1.806179974 0.046153846 0.127272727 0.261538462 55 1 0 64 3R:29164794-29164877 6 CG11897 FBtr0085387|FBtr0085386 29164548|29164548 29164966|29164966 GTACTT 6mer3-8 dme-miR-252-5p 3R + 29164795 29164937 3'utr CG11897 FlyBase G35213.1 AAAGCAATTCGCAAACGCCGTGCACAAATCAGAGCAAGTTCAATTAAACGAAGACAAATAGTGATTTAGGTACTTTTTTAAAATATGTAGCTAATGTAGGATTACCACATCGTACTTATAGATACGTACAATCTCAATAAAGT 45 29164860 0.981385763 11 41 293 0.939393939 1.491361694 0.136363636 0.333333333 0.545454545 45 3 1 62 3R:29164795-29164937 6 38 4467 FBgn0039644 385.6666667 9.473333333 14.69333333 0.098530683 4.011259676 2.586206897 4 4 4 0.01 dme-miR-304-5p 7mer-m8 TGAGATT 3R 29221864 29221870 + 3R_29221864_29221870_+ 0.620203442 0.620203442 0.620203442 0 Ef1gamma FBtr0085393|FBtr0085392|FBtr0302442 29221775|29221775|29221775 29222109|29222109|29222109 3R + 29221745 29222006 stop_codon Ef1gamma FlyBase G46701.1 GCAAGTTCAACCAGGGCAAGATCTTCAAGTAATCATCTCTGCCTAGCCCAGCTCCGCTCAAAGCAGCAGCCGCCCTCATTTAGACCAACAACAACAACAGCAGCAGTAACAATAAAGTTTGAGATTTAAAATGCAGGAAGAGCACAATGCCCATTTCTTAAGTTCCAACTGATAAGTACACTAAAGATATCCAATATCTGTCGTGCTGCCTCCCACGTTTGGCGGAATCGTGTGTCTCGCCTCCTGCATTTTGTACTGGAGA 65 29221863 0.975518867 26 57 360 0.871794872 1.054357662 0.205128205 0.169230769 0.307692308 65 5 5 68 3R:29221745-29222006 7 Ef1gamma FBtr0302442|FBtr0085392|FBtr0085393 29221775|29221775|29221775 29222109|29222109|29222109 TGAGATT 7mer-m8 dme-miR-304-5p 3R + 29221752 29221924 stop_codon Ef1gamma FlyBase G35225.1 CAACCAGGGCAAGATCTTCAAGTAATCATCTCTGCCTAGCCCAGCTCCGCTCAAAGCAGCAGCCGCCCTCATTTAGACCAACAACAACAACAGCAGCAGTAACAATAAAGTTTGAGATTTAAAATGCAGGAAGAGCACAATGCCCATTTCTTAAGTTCCAACTGATAAGTACA 32 29221863 0.97091587 13 29 168 0.954545455 1.62324929 0.295454545 0.375 0.545454545 32 2 0 42 3R:29221752-29221924 7 17 4468 FBgn0029176 8118.963333 592.2866667 901.75 0.002093863 0.028702318 0.018852232 1 1 1 0.01 dme-miR-283-5p 7mer-m8 TGATATT 3R 29222040 29222046 + 3R_29222040_29222046_+ 0.620203677 0.620203677 0.620203677 0 Ef1gamma FBtr0085393|FBtr0085392|FBtr0302442 29221775|29221775|29221775 29222109|29222109|29222109 3R + 29222028 29222075 3'utr Ef1gamma FlyBase G46702.1 CATAACACAGCATGATATTGTCAACGGAACAGCCGCCTGCAGTCAGAA 10 29222045 0.823103133 4 10 32 1 1.113943352 0.230769231 0.2 0.384615385 10 0 0 13 3R:29222028-29222075 7 Ef1gamma FBtr0302442|FBtr0085392|FBtr0085393 29221775|29221775|29221775 29222109|29222109|29222109 TGATATT 7mer-m8 dme-miR-283-5p 3R + 29222025 29222083 3'utr Ef1gamma FlyBase G35226.1 AAGCATAACACAGCATGATATTGTCAACGGAACAGCCGCCTGCAGTCAGAAAATATTTA 11 29222043 0.954670349 6 11 51 1 1.113943352 0.307692308 0.181818182 0.307692308 11 0 0 13 3R:29222025-29222083 7 8 4469 FBgn0029176 8118.963333 592.2866667 901.75 0.000985347 0.013506973 0.008871638 -5 -3 -4 0.01 dme-miR-283-5p 8mer-A1 TGATATTA 3R 29235069 29235076 + 3R_29235069_29235076_+ 0.592192292 0.592192292 0.592192292 0 CG15817 FBtr0300833|FBtr0333818|FBtr0300832 29233962|29233962|29233962 29235162|29235302|29235162 3R + 29235037 29235120 3'utr CG15817 FlyBase G46717.1 AGTTCTATTTTTTTCCAAGAGCGCTGCTATAGTGATATTAACATTTACAGAGCAAAGATTTGTGTACATTGTAATTTGTAAAGT 101 29235065 0.71315795 10 96 729 0.935483871 1.763427994 0.088709677 0.178217822 0.330645161 101 7 1 116 3R:29235037-29235120 8 CG15817 FBtr0300832|FBtr0333818|FBtr0300833 29233962|29233962|29233962 29235162|29235302|29235162 TGATATTA 8mer-A1 dme-miR-283-5p 3R + 29235037 29235128 3'utr CG15817 FlyBase G35239.1 AGTTCTATTTTTTTCCAAGAGCGCTGCTATAGTGATATTAACATTTACAGAGCAAAGATTTGTGTACATTGTAATTTGTAAAGTTTACATAT 62 29235097 0.961602065 12 62 458 1 1.986771734 0.12371134 0.338709677 0.577319588 62 0 0 97 3R:29235037-29235128 8 54 4470 FBgn0028476 401.67 10.06 15.48 0.134438718 5.367793241 3.488372093 4 -28 -12 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 29315368 29315373 - 3R_29315368_29315373_- 1 1 1 0 Cnx99A FBtr0085438|FBtr0334873|FBtr0085437 29315252|29315252|29315252 29315834|29315834|29315834 3R - 29315346 29315399 3'utr Cnx99A FlyBase G55593.1 AAAGCAGATAAATCTAATGGCAAGCATCTAGTTTAATATTATGTAATTTAAACG 14 29315382 0.978731709 5 14 96 1 1.204119983 0.125 0.142857143 0.25 14 0 0 16 3R:29315346-29315399 6 Cnx99A FBtr0085437|FBtr0085438|FBtr0334873 29315252|29315252|29315252 29315834|29315834|29315834 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R - 29315319 29315397 3'utr Cnx99A FlyBase G41951.1 AGCAGATAAATCTAATGGCAAGCATCTAGTTTAATATTATGTAATTTAAACGAAATTGAATAGTATGTTAGTTATACTC 10 29315382 0.978821631 4 10 71 1 1.204119983 0.0625 0.4 0.625 10 0 0 16 3R:29315319-29315397 6 9.5 4471 FBgn0015622 4351.313333 201.68 309.1566667 0.002183249 0.047104324 0.030728757 9 9 9 0.01 dme-miR-317-3p 6mer2-7 GTGTTC 3R 29315599 29315604 - 3R_29315599_29315604_- 1 1 1 0 Cnx99A FBtr0085438|FBtr0334873|FBtr0085437 29315252|29315252|29315252 29315834|29315834|29315834 3R - 29315572 29315669 3'utr Cnx99A FlyBase G55596.1 ACACACTCGTTTCGGTTTAGTCAACTCTGTACGTACTTTTGCCGTATTATCGTTGCATTTCTGTCGTGTTCGACCCTCTGTCGTCCCCATATCTCCTA 17 29315590 0.672654886 12 14 148 0.842105263 0.726998728 0.052631579 0.117647059 0.210526316 17 1 2 16 3R:29315572-29315669 6 Cnx99A FBtr0085437|FBtr0085438|FBtr0334873 29315252|29315252|29315252 29315834|29315834|29315834 GTGTTC 6mer2-7 dme-miR-317-3p 3R - 29315576 29315671 3'utr Cnx99A FlyBase G41952.1 ACACACACTCGTTTCGGTTTAGTCAACTCTGTACGTACTTTTGCCGTATTATCGTTGCATTTCTGTCGTGTTCGACCCTCTGTCGTCCCCATATCT 11 29315590 0.986944929 9 10 95 0.947368421 1.255272505 0.105263158 0.545454545 0.736842105 11 1 0 18 3R:29315576-29315671 6 6.5 4472 FBgn0015622 4351.313333 201.68 309.1566667 0.001493802 0.032229274 0.021024939 -14 -14 -14 0.01 dme-miR-184-3p 7mer-m8 TCCGTCC 3R 29485121 29485127 + 3R_29485121_29485127_+ 0.661615243 0.661615243 0.661615243 0 Ptp99A FBtr0303148|FBtr0303454|FBtr0085422|FBtr0085424 29484488|29484488|29484488|29484488 29486704|29487131|29486704|29486704 3R + 29485107 29485145 5'utr Ptp99A FlyBase G46727.1 TCGAATCGATTCAGTCCGTCCTAGTATCTGTTATTCTTT 10 29485116 0.688481828 5 10 82 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 3R:29485107-29485145 7 Ptp99A FBtr0085422|FBtr0085424|FBtr0303148|FBtr0303454 29484488|29484488|29484488|29484488 29486704|29486704|29486704|29487131 TCCGTCC 7mer-m8 dme-miR-184-3p 3R + 29485106 29485142 5'utr Ptp99A FlyBase G35249.1 TTCGAATCGATTCAGTCCGTCCTAGTATCTGTTATTC 9 29485117 0.718774042 5 8 62 0.916666667 0.740362689 0.333333333 0.333333333 0.5 9 0 1 11 3R:29485106-29485142 7 9.5 4473 FBgn0004369 285.67 6.166666667 9.486666667 0.033255155 1.540540541 1.001405481 5 4 4.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 29499269 29499274 - 3R_29499269_29499274_- 1 1 1 0 Trc8 FBtr0085432|FBtr0085430|FBtr0333188|FBtr0085429 29499023|29499023|29499023|29499120 29499641|29499641|29499641|29499641 3R - 29499250 29499317 coding-3'utr Trc8 FlyBase G55625.1 AGCTGAACGCTGATCGGCAATGAGACGATAATTCAAACGGAGATGATCTACATATGTACGTTAAGTTT 29 29499274 0.928069783 3 25 148 0.861111111 1.014240439 0.111111111 0.24137931 0.388888889 29 3 2 31 3R:29499250-29499317 6 Trc8 FBtr0085432|FBtr0085430|FBtr0333188|FBtr0085429 29499023|29499023|29499023|29499120 29499641|29499641|29499641|29499641 TGATCT 6mer3-8 dme-bantam-3p 3R - 29499245 29499312 3'utr Trc8 FlyBase G41970.1 AACGCTGATCGGCAATGAGACGATAATTCAAACGGAGATGATCTACATATGTACGTTAAGTTTATGGT 31 29499297 0.940686461 6 22 161 0.723404255 0.62838893 0.170212766 0.387096774 0.595744681 31 6 7 34 3R:29499245-29499312 6 17.5 4474 FBgn0039668 519.2566667 17.16333333 26.17333333 0.033702023 1.019615459 0.66861946 0 23 11.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 3R 29598469 29598476 + 3R_29598469_29598476_+ 0.674982063 0.674982063 0.674982063 0 alph FBtr0085445|FBtr0309241|FBtr0085443|FBtr0085446|FBtr0085442 29598177|29596554|29597798|29598177|29598177 29599231|29598942|29599234|29599231|29599231 3R + 29598421 29598501 5'utr alph FlyBase G46749.1 AGCCACGCCCACACAACTTTAAGATATAGGAGAGATCTAGAACAGAGCGTACCTGAGCAGACCTCAGAGACTCGGAATCGG 42 29598457 0.941509768 6 36 144 0.857142857 1.146128036 0.367346939 0.119047619 0.244897959 42 5 2 42 3R:29598421-29598501 8 alph FBtr0309241|FBtr0085443|FBtr0085446|FBtr0085442|FBtr0085445 29596554|29597798|29598177|29598177|29598177 29598942|29599234|29599231|29599231|29599231 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R + 29598424 29598478 5'utr alph FlyBase G35261.1 CACGCCCACACAACTTTAAGATATAGGAGAGATCTAGAACAGAGCGTACCTGAGC 22 29598457 0.923281079 7 21 70 0.971428571 1.531478917 0.342857143 0.409090909 0.628571429 22 1 0 34 3R:29598424-29598478 8 18 4475 FBgn0086361 5795.586667 263.87 406.87 0.003105812 0.068215409 0.044240175 12 12 12 0.01 dme-miR-965-3p 6mer3-8 TACGCT 3R 29599189 29599194 + 3R_29599189_29599194_+ 1 1 1 0 alph FBtr0085445|FBtr0085443|FBtr0085446|FBtr0085442 29598177|29597798|29598177|29598177 29599231|29599234|29599231|29599231 3R + 29599164 29599211 5'utr alph FlyBase G46750.2 AAATCTTAAGAGAGAAAAGCAAAATTACGCTCGAGTTTGTAGTAAATG 159 29599188 0.881126017 6 154 790 0.971098266 1.62324929 0.144508671 0.088050314 0.161849711 159 2 3 168 3R:29599164-29599211 6 alph FBtr0085443|FBtr0085446|FBtr0085442|FBtr0085445 29597798|29598177|29598177|29598177 29599234|29599231|29599231|29599231 TACGCT 6mer3-8 dme-miR-965-3p 3R + 29599164 29599209 5'utr alph FlyBase G35264.1 AAATCTTAAGAGAGAAAAGCAAAATTACGCTCGAGTTTGTAGTAAA 65 29599188 0.958281791 4 63 302 0.956989247 1.472268752 0.096774194 0.369230769 0.559139785 65 2 2 89 3R:29599164-29599209 6 110.5 4476 FBgn0086361 5795.586667 263.87 406.87 0.019066232 0.418766817 0.271585519 1 1 1 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 3R 29620687 29620692 + 3R_29620687_29620692_+ 1 1 1 0 CG1907 FBtr0085447 29620554 29620758 3R + 29620613 29620754 3'utr CG1907 FlyBase G46753.1 CGACGTTAAGTTTAAAGAAAACTTAGGGCATTTATATGTCGGCAATTCCGGTGACAATATTACATGATAACGATTAGCTTGAATGTTGAAACAGTTTTTCTAGCGCCATAAGTATAAAGTGGATTCTCAATAAAGCACAAAA 28 29620686 0.978554358 17 27 184 0.96875 1.190331698 0.28125 0.142857143 0.25 28 0 1 31 3R:29620613-29620754 6 CG1907 FBtr0085447 29620554 29620758 TAGCTT 6mer3-8 dme-miR-79-3p 3R + 29620653 29620699 3'utr CG1907 FlyBase G35266.1 GGCAATTCCGGTGACAATATTACATGATAACGATTAGCTTGAATGTT 8 29620686 0.972501854 2 8 49 1 1.113943352 0.461538462 0.375 0.615384615 8 0 0 13 3R:29620653-29620699 6 8 4477 FBgn0039674 372.3333333 27.88666667 42.61 0.021486124 0.286875448 0.187749355 1 1 1 0.01 dme-miR-184-5p 6mer2-7 GATAAG 3R 29747443 29747448 + 3R_29747443_29747448_+ 1 1 1 0 IntS11 FBtr0085476 29747396 29747513 3R + 29747421 29747483 3'utr IntS11 FlyBase G46805.1 AATCCCACGCCTTAATTCCATAGATAAGCACAAAGTGTAGATACCACCAATTTCTGAAAGTTT 21 29747472 0.871718264 10 20 111 0.96 1.380211242 0.08 0.19047619 0.32 21 1 0 24 3R:29747421-29747483 6 IntS11 FBtr0085476 29747396 29747513 GATAAG 6mer2-7 dme-miR-184-5p 3R + 29747421 29747485 3'utr IntS11 FlyBase G35304.1 AATCCCACGCCTTAATTCCATAGATAAGCACAAAGTGTAGATACCACCAATTTCTGAAAGTTTAA 19 29747472 0.983285251 6 15 116 0.807692308 1.322219295 0.192307692 0.333333333 0.538461538 18 5 0 21 3R:29747421-29747485 6 8 4478 FBgn0039691 1054.993333 63.04333333 96.71666667 0.007582986 0.126896843 0.082715837 -29 -29 -29 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3R 29753021 29753026 + 3R_29753021_29753026_+ 1 1 1 0 yata FBtr0333822|FBtr0085477 29752956|29752956 29754528|29753328 3R + 29752970 29753039 3'utr yata FlyBase G46827.1 GATAACAGCGACGTGTGTTGCTTAGCTGTTATTCGCATCGTACATCTAAGCCCAAAGTGTATTTTGTATA 19 29753033 0.988770681 10 17 137 0.923076923 1.079181246 0 0.263157895 0.461538462 19 1 1 24 3R:29752970-29753039 6 yata FBtr0333822|FBtr0085477 29752956|29752956 29754528|29753328 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 29752992 29753040 3'utr yata FlyBase G35322.1 TAGCTGTTATTCGCATCGTACATCTAAGCCCAAAGTGTATTTTGTATAT 18 29753033 0.987615879 4 16 138 0.928571429 1.113943352 0 0.444444444 0.642857143 18 1 1 26 3R:29752992-29753040 6 16 4479 FBgn0260990 1641.69 44.94333333 68.84666667 0.009746054 0.356003857 0.232400504 -12 -12 -12 0.01 dme-miR-283-5p 7mer-A1 GATATTA 3R 29753245 29753251 + 3R_29753245_29753251_+ 0.782911824 0.782911824 0.782911824 0 yata FBtr0333822|FBtr0085477 29752956|29752956 29754528|29753328 3R + 29753217 29753327 3'utr yata FlyBase G46829.1 AGCCGTTTTGTATTTCTAATGCTGGCACGATATTAGCTAATATATTCAGCGTCTCTAACGAAAATTCCAATGTAAAGCACTGTAATTAAACCTGTAATTTATATTTATAAA 21 29753236 0.791160112 13 21 165 1 1.397940009 0.2 0.142857143 0.28 21 0 0 25 3R:29753217-29753327 7 yata FBtr0333822|FBtr0085477 29752956|29752956 29754528|29753328 GATATTA 7mer-A1 dme-miR-283-5p 3R + 29753213 29753318 3'utr yata FlyBase G35324.1 ATATAGCCGTTTTGTATTTCTAATGCTGGCACGATATTAGCTAATATATTCAGCGTCTCTAACGAAAATTCCAATGTAAAGCACTGTAATTAAACCTGTAATTTAT 12 29753274 0.982422844 8 11 79 0.888888889 1.204119983 0.333333333 0.416666667 0.611111111 12 2 0 16 3R:29753213-29753318 7 3.5 4480 FBgn0260990 1641.69 44.94333333 68.84666667 0.002131949 0.077875844 0.05083761 9 -29 -10 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 3R 29753495 29753500 + 3R_29753495_29753500_+ 1 1 1 0 yata FBtr0333822 29752956 29754528 3R + 29753479 29753551 3'utr yata FlyBase G46831.1 GAGCGAATGGATATGGATGTGCGTGTGTCTGATTTCAAAACCCATTTTAGTCGCCCCTTTCCAAAGGCTAACA 8 29753497 0.974708036 8 8 44 1 0.954242509 0.111111111 0.125 0.222222222 8 0 0 9 3R:29753479-29753551 6 yata FBtr0333822 29752956 29754528 ATGTGC 6mer3-8 dme-miR-305-3p 3R + 29753479 29753522 3'utr yata FlyBase G35326.1 GAGCGAATGGATATGGATGTGCGTGTGTCTGATTTCAAAACCCA 5 29753504 0.983294682 4 5 32 1 0.698970004 0.2 0 0 5 0 0 5 3R:29753479-29753522 6 4.5 4481 FBgn0260990 1641.69 44.94333333 68.84666667 0.002741078 0.100126085 0.065362642 -2 -9 -5.5 0.01 dme-miR-1006-3p 6mer2-7 GAATTT 3R 29753657 29753662 + 3R_29753657_29753662_+ 1 1 1 0 yata FBtr0333822 29752956 29754528 3R + 29753567 29753674 3'utr yata FlyBase G46832.1 GATGCCAATCCACGCGATTTTCGAGGGACAGTGAATATTTAGAAATCTAAACTAAACGTATTTTTGCGAATGGAGCGTAACCAAAATTGTGAATTTTAATACATAAAT 99 29753653 0.98167078 12 98 719 0.991935484 2.089905111 0.072580645 0.191919192 0.35483871 99 1 0 123 3R:29753567-29753674 6 yata FBtr0333822 29752956 29754528 GAATTT 6mer2-7 dme-miR-1006-3p 3R + 29753569 29753674 3'utr yata FlyBase G35327.1 TGCCAATCCACGCGATTTTCGAGGGACAGTGAATATTTAGAAATCTAAACTAAACGTATTTTTGCGAATGGAGCGTAACCAAAATTGTGAATTTTAATACATAAAT 64 29753653 0.981141553 10 64 470 1 2.008600172 0.049019608 0.453125 0.656862745 64 0 0 102 3R:29753569-29753674 6 71 4482 FBgn0260990 1641.69 44.94333333 68.84666667 0.043248116 1.579767114 1.031277234 4 4 4 0.01 dme-miR-283-5p 8mer-m1 TGATATTT 3R 29793453 29793460 + 3R_29793453_29793460_+ 0.452558316 0.54106919 0.496813753 0.062586658 kay FBtr0099990|FBtr0099988|FBtr0290076|FBtr0099989|FBtr0339165 29793023|29793023|29793023|29793023|29793023 29794113|29794113|29794113|29794113|29794113 3R + 29793243 29793681 3'utr kay FlyBase G46861.3 TGATTTCGCTATGTCTTTTACATACGCCGAGGAGCTATGTACATATGTTATGTACTTGTAATTTGTGCAATTTTCAAACCTCTTCATTGCGCGTTGTATATTTTCAAAAAATATAAGAACGCGAACGCGAACGCGAACGACCGACGATGCATGATGAGAATGATAAGGATAATGATGATAATAGGGCGTGTAGATTTGCAGGATGCGTTGTGATATTTATTATAAAACGAATACAAAAGATGCGAGGATGAAACAAAGTAGAAAGCAAACAGGAGCGTCTAATGAAAGGAACTAAGCCGGTTTTAAAATTGTACATTTAAACGAATCGTAAAGCGTAAATATACTATAAAACAAAACAAAGTGAATATATATTCAGCATACAAACTAAATACAATGCCTTGAGAGAGAATTAAGAAATGCAAACCTTTATATATAGAGA 1895 29793449 0.982144577 81 1793 12918 0.946983547 1.811239773 0.099634369 0.131926121 0.248171846 1895 85 31 2072 3R:29793243-29793681 8 kay FBtr0099989|FBtr0339165|FBtr0099988|FBtr0290076|FBtr0099990 29793023|29793023|29793023|29793023|29793023 29794113|29794113|29794113|29794113|29794113 TGATATTT 8mer-m1 dme-miR-283-5p 3R + 29793372 29793565 3'utr kay FlyBase G35357.1 AACGCGAACGACCGACGATGCATGATGAGAATGATAAGGATAATGATGATAATAGGGCGTGTAGATTTGCAGGATGCGTTGTGATATTTATTATAAAACGAATACAAAAGATGCGAGGATGAAACAAAGTAGAAAGCAAACAGGAGCGTCTAATGAAAGGAACTAAGCCGGTTTTAAAATTGTACATTTAAACG 707 29793450 0.982516699 35 668 6088 0.945641987 1.623679925 0.112464855 0.374823197 0.585754452 707 35 23 1009 3R:29793372-29793565 8 646 4483 FBgn0001297 8038.743333 271.3133333 416.43 0.080360819 2.381010885 1.551281128 4 3 3.5 0.01 dme-miR-33-5p 7mer-A1 AATGCAA 3R 29793658 29793664 + 3R_29793658_29793664_+ 0.782911824 0.782911824 0.782911824 0 kay FBtr0099990|FBtr0099988|FBtr0290076|FBtr0099989|FBtr0339165 29793023|29793023|29793023|29793023|29793023 29794113|29794113|29794113|29794113|29794113 3R + 29793243 29793681 3'utr kay FlyBase G46861.3 TGATTTCGCTATGTCTTTTACATACGCCGAGGAGCTATGTACATATGTTATGTACTTGTAATTTGTGCAATTTTCAAACCTCTTCATTGCGCGTTGTATATTTTCAAAAAATATAAGAACGCGAACGCGAACGCGAACGACCGACGATGCATGATGAGAATGATAAGGATAATGATGATAATAGGGCGTGTAGATTTGCAGGATGCGTTGTGATATTTATTATAAAACGAATACAAAAGATGCGAGGATGAAACAAAGTAGAAAGCAAACAGGAGCGTCTAATGAAAGGAACTAAGCCGGTTTTAAAATTGTACATTTAAACGAATCGTAAAGCGTAAATATACTATAAAACAAAACAAAGTGAATATATATTCAGCATACAAACTAAATACAATGCCTTGAGAGAGAATTAAGAAATGCAAACCTTTATATATAGAGA 1895 29793652 0.982144577 81 1793 12918 0.946983547 1.811239773 0.099634369 0.131926121 0.248171846 1895 85 31 2072 3R:29793243-29793681 7 kay FBtr0099989|FBtr0339165|FBtr0099988|FBtr0290076|FBtr0099990 29793023|29793023|29793023|29793023|29793023 29794113|29794113|29794113|29794113|29794113 AATGCAA 7mer-A1 dme-miR-33-5p 3R + 29793591 29793681 3'utr kay FlyBase G35357.2 AAACAAAACAAAGTGAATATATATTCAGCATACAAACTAAATACAATGCCTTGAGAGAGAATTAAGAAATGCAAACCTTTATATATAGAGA 425 29793652 0.847086296 17 393 2000 0.926948052 1.802393599 0.12012987 0.334117647 0.540584416 425 37 8 571 3R:29793591-29793681 7 582 4484 FBgn0001297 8038.743333 271.3133333 416.43 0.072399376 2.145121262 1.397593833 6 6 6 0.01 dme-miR-304-5p 6mer3-8 TGAGAT 3R 29793772 29793777 + 3R_29793772_29793777_+ 1 1 1 0 kay FBtr0099990|FBtr0099988|FBtr0290076|FBtr0099989|FBtr0339165 29793023|29793023|29793023|29793023|29793023 29794113|29794113|29794113|29794113|29794113 3R + 29793713 29793807 3'utr kay FlyBase G46862.1 AAAGCTAAACAATAATGGCGTTGAAGCGAGTTTTATATTGAGCAAAAGCAAATGTGAAATGAGATAAATATACTTATTGTGTACTCTGTAAGCTG 338 29793772 0.863552508 18 318 1418 0.94188862 1.686859614 0.457627119 0.162721893 0.314769976 338 17 7 389 3R:29793713-29793807 6 kay FBtr0099989|FBtr0339165|FBtr0099988|FBtr0290076|FBtr0099990 29793023|29793023|29793023|29793023|29793023 29794113|29794113|29794113|29794113|29794113 TGAGAT 6mer3-8 dme-miR-304-5p 3R + 29793712 29793814 3'utr kay FlyBase G35358.1 TAAAGCTAAACAATAATGGCGTTGAAGCGAGTTTTATATTGAGCAAAAGCAAATGTGAAATGAGATAAATATACTTATTGTGTACTCTGTAAGCTGCAGTAGA 251 29793772 0.882069315 19 239 974 0.942465753 2.536558443 0.534246575 0.326693227 0.536986301 251 21 0 344 3R:29793712-29793814 6 239 4485 FBgn0001297 8038.743333 271.3133333 416.43 0.029731015 0.880900312 0.57392599 0 0 0 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 29800958 29800964 + 3R_29800958_29800964_+ 0.801970437 0.801970437 0.801970437 0 Drice FBtr0085482|FBtr0085482|FBtr0085482 29800916|29800916|29800916 29801584|29801584|29801584 3R + 29800902 29800976 stop_codon Drice FlyBase G46870.1 AGCCGGACGGGTTTGATGGCTAATGGTATGGATCAAACGGTGGGTACGGCGAGGTGTGTGATAAACCAAGTCGCA 84 29800956 0.961690115 10 77 383 0.920454545 1.306425028 0.079545455 0.035714286 0.079545455 84 4 3 81 3R:29800902-29800976 7 Drice FBtr0085482|FBtr0085482|FBtr0085482 29800916|29800916|29800916 29801584|29801584|29801584 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 29800901 29800978 stop_codon Drice FlyBase G35369.1 CAGCCGGACGGGTTTGATGGCTAATGGTATGGATCAAACGGTGGGTACGGCGAGGTGTGTGATAAACCAAGTCGCAAT 51 29800956 0.946941896 5 49 210 0.95 1.880813592 0.075 0.392156863 0.6125 51 4 0 76 3R:29800901-29800978 7 61 4486 FBgn0019972 801.2566667 50.41666667 76.82666667 0.076130412 1.209917355 0.793995141 2 2 2 0.01 dme-miR-34-5p 7mer-m8 CACTGCC 3R 29801069 29801075 + 3R_29801069_29801075_+ 0.708953133 0.708872281 0.708912707 5.71E-05 Drice FBtr0085482 29800916 29801584 3R + 29801024 29801133 3'utr Drice FlyBase G46871.1 TACAACACTTTTTTAACCTGCCCAATTGCTCGACGAGATTGGTGCCACTGCCCGTTTTATTTTATTTAGGCACAAAGTATCTTTCGATTGACATTTATTAATGTCGCATT 80 29801072 0.850501341 19 72 566 0.948979592 1.968482949 0.112244898 0.1875 0.336734694 80 5 0 93 3R:29801024-29801133 7 Drice FBtr0085482 29800916 29801584 CACTGCC 7mer-m8 dme-miR-34-5p 3R + 29800998 29801176 3'utr Drice FlyBase G35370.1 CTATCGGCCTTGCAGCATATTTTTTATACAACACTTTTTTAACCTGCCCAATTGCTCGACGAGATTGGTGCCACTGCCCGTTTTATTTTATTTAGGCACAAAGTATCTTTCGATTGACATTTATTAATGTCGCATTTACTCGTCTGTATTTATATTTTTTGGGGTGGGTAGAGTAGATC 63 29801066 0.985185707 29 58 477 0.92 1.486666573 0.2 0.444444444 0.65 63 6 2 92 3R:29800998-29801176 7 35 4487 FBgn0019972 801.2566667 50.41666667 76.82666667 0.043681384 0.694214876 0.455570982 -3 3 0 0.01 dme-miR-970-3p 6mer3-8 TCTTAT 3R 29801518 29801523 + 3R_29801518_29801523_+ 1 1 1 0 Drice FBtr0085482 29800916 29801584 3R + 29801494 29801580 3'utr Drice FlyBase G46874.1 ATACTATTTCTATGCCATTTGTACTCTTATATAATGCACATTAGCAAATGTTCTCCTTTCAAGTTAACCGCTAATAAATCCGATTGA 17 29801513 0.987907305 11 17 153 1 1.342422681 0 0.235294118 0.409090909 17 0 0 22 3R:29801494-29801580 6 Drice FBtr0085482 29800916 29801584 TCTTAT 6mer3-8 dme-miR-970-3p 3R + 29801488 29801525 3'utr Drice FlyBase G35373.1 CAATATATACTATTTCTATGCCATTTGTACTCTTATAT 5 29801512 0.989064169 4 5 49 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 3R:29801488-29801525 6 7.5 4488 FBgn0019972 801.2566667 50.41666667 76.82666667 0.009360297 0.148760331 0.097622353 5 6 5.5 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 29804321 29804326 - 3R_29804321_29804326_- 1 1 1 0 ncd FBtr0344976|FBtr0085534 29804288|29804288 29804405|29804405 3R - 29804291 29804362 3'utr ncd FlyBase G55721.1 ACCTGTTATTGCTTAATTTATGTGTGTTTACTTTTAGTGCAAATAAACTAATAAAGTGCTGGAATTCAAAGC 15 29804328 0.989524394 6 15 145 1 1.278753601 0.368421053 0.266666667 0.421052632 15 0 0 19 3R:29804291-29804362 6 ncd FBtr0344976|FBtr0085534 29804288|29804288 29804405|29804405 GTGCAA 6mer3-8 dme-miR-92b-3p 3R - 29804294 29804352 3'utr ncd FlyBase G42042.1 GCTTAATTTATGTGTGTTTACTTTTAGTGCAAATAAACTAATAAAGTGCTGGAATTCAA 9 29804329 0.989776452 5 8 77 1 1.230448921 0.470588235 0.333333333 0.647058824 9 0 0 17 3R:29804294-29804352 6 9.5 4489 FBgn0002924 2335.956667 120.6666667 184.3066667 0.004066856 0.078729282 0.051544527 2 3 2.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 29855685 29855690 - 3R_29855685_29855690_- 1 1 1 0 dgt1 FBtr0335006|FBtr0335006|FBtr0335006 29855627|29855627|29855627 29855943|29855943|29855943 3R - 29855673 29855702 3'utr dgt1 FlyBase G55758.1 AAGCAAGCCCTTTGTGATCGACCCTGAATA 17 29855691 0.774802664 3 17 81 1 1.342422681 0.045454545 0.176470588 0.363636364 17 0 0 22 3R:29855673-29855702 6 dgt1 FBtr0335006|FBtr0335006|FBtr0335006 29855627|29855627|29855627 29855943|29855943|29855943 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 29855659 29855709 3'utr dgt1 FlyBase G42073.1 ACTGTCTAAGCAAGCCCTTTGTGATCGACCCTGAATAAATTGCCGACCTCT 11 29855691 0.953786971 3 11 52 1 1.204119983 0 0.363636364 0.5625 11 0 0 16 3R:29855659-29855709 6 13.5 4490 FBgn0039710 509.1766667 36.19333333 55.42333333 0.026513391 0.372996869 0.24357972 1 1 1 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3R 29860326 29860331 - 3R_29860326_29860331_- 0.999999879 1 0.99999994 7.07E-08 CG15514 FBtr0335005|FBtr0085523 29860053|29860053 29860353|29860353 3R - 29860281 29860344 3'utr CG15514 FlyBase G55772.1 GATTGGAACGGCTTGTGTTTGTAGGTGGATAAGGCGGGCAATATGATTATTTACACTTAGGTAT 12 29860331 0.746866454 6 9 98 0.8 0.602059991 0.066666667 0.166666667 0.333333333 12 1 2 12 3R:29860281-29860344 6 CG15514 FBtr0085523|FBtr0335005 29860053|29860053 29860353|29860353 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 29860282 29860344 3'utr CG15514 FlyBase G42079.1 GATTGGAACGGCTTGTGTTTGTAGGTGGATAAGGCGGGCAATATGATTATTTACACTTAGGTA 15 29860331 0.958005878 9 15 101 1 1.397940009 0.64 0.533333333 0.72 15 0 0 25 3R:29860282-29860344 6 6.5 4491 FBgn0039712 589 53.38333333 81.62333333 0.011035654 0.121760849 0.079634092 0 0 0 0.01 dme-miR-12-5p 6mer3-8 AATACT 3R 29874608 29874613 + 3R_29874608_29874613_+ 1 1 1 0 CG34133 FBtr0301073|FBtr0110888|FBtr0335004 29874565|29874565|29874565 29875159|29874817|29875159 3R + 29874545 29874609 stop_codon CG34133 FlyBase G46944.1 CTACACGGCCATTGCGGATTAGTCTTTAGATAGAGGATGGGAGATATAGAAGAGTAAAAGTGAAA 14 29874591 0.972016328 5 13 78 0.941176471 1.204119983 0.529411765 0.214285714 0.352941176 14 1 0 16 3R:29874545-29874609 2 CG34133 FBtr0335004|FBtr0110888|FBtr0301073 29874565|29874565|29874565 29875159|29874817|29875159 AATACT 6mer3-8 dme-miR-12-5p 3R + 29874609 29874676 3'utr CG34133 FlyBase G35427.1 ATACTATTTTATTTTTGTATTCGTGACATTTTGTATCGTTAGTAACTAGCGCCATTGCTGATTTGTAT 21 29874583 0.757921466 10 19 205 0.861111111 1.491361694 0.222222222 0.523809524 0.722222222 21 5 0 31 3R:29874609-29874676 4 2 4492 FBgn0083969 922.7466667 26.26 40.29 0.002167442 0.076161462 0.049640109 17 25 21 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 3R 29874914 29874919 + 3R_29874914_29874919_+ 0.99242331 0.996200331 0.99431182 0.002670742 CG34133 FBtr0301073|FBtr0335004 29874565|29874565 29875159|29875159 3R + 29874872 29874941 3'utr CG34133 FlyBase G46948.1 CGAAAGTCAATTGTATATTGTTATGCCCTTGTAAGTTACATTTTGACTGTACAGATGCTTTGATTTCGTT 21 29874931 0.689624384 11 20 200 0.958333333 1.361727836 0.416666667 0.095238095 0.208333333 21 1 0 23 3R:29874872-29874941 6 CG34133 FBtr0335004|FBtr0301073 29874565|29874565 29875159|29875159 TTGACT 6mer3-8 dme-miR-1012-3p 3R + 29874868 29874941 3'utr CG34133 FlyBase G35429.1 ATTTCGAAAGTCAATTGTATATTGTTATGCCCTTGTAAGTTACATTTTGACTGTACAGATGCTTTGATTTCGTT 10 29874931 0.99052473 6 10 104 1 1.146128036 0.214285714 0.4 0.571428571 10 0 0 14 3R:29874868-29874941 6 12 4493 FBgn0083969 922.7466667 26.26 40.29 0.013004653 0.456968774 0.297840655 -17 -17 -17 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 29902981 29902986 + 3R_29902981_29902986_+ 0.998810825 0.99937699 0.999093907 0.000400364 CG31038 FBtr0085494|FBtr0333274|FBtr0333275|FBtr0085497|FBtr0085498 29902590|29902590|29902590|29902590|29902590 29903231|29903231|29903231|29903231|29903231 3R + 29902953 29903000 3'utr CG31038 FlyBase G46952.1 ACCAGCCTCTGTGGTTAGGAGTCCTTTGTGATCTTCAGTTGTAAGTTT 14 29902986 0.961245604 5 11 140 0.785714286 0.740362689 0.285714286 0 0 14 2 1 11 3R:29902953-29903000 6 CG31038 FBtr0085494|FBtr0085498|FBtr0085497|FBtr0333275|FBtr0333274 29902590|29902590|29902590|29902590|29902590 29903231|29903231|29903231|29903231|29903231 TGATCT 6mer3-8 dme-bantam-3p 3R + 29902955 29903000 3'utr CG31038 FlyBase G35432.1 CAGCCTCTGTGGTTAGGAGTCCTTTGTGATCTTCAGTTGTAAGTTT 13 29902978 0.659194469 4 13 151 1 1.301029996 0.1 0.384615385 0.6 13 0 0 20 3R:29902955-29903000 6 13 4494 FBgn0051038 142.6666667 4.59 7.016666667 0.091121495 2.832244009 1.852731591 -5 3 -1 0.01 dme-miR-7-5p 6mer3-8 GTCTTC 3R 29933964 29933969 + 3R_29933964_29933969_+ 1 1 1 0 CG42557 FBtr0301256 29933904 29934587 3R + 29933942 29933992 start_codon CG42557 FlyBase G46953.1 AATGGAATCCACGTTCGGTAAAGTCTTCATGTTTCTCACGGACCTCGCTTG 12 29933971 0.983661954 2 12 110 1 1.113943352 0.153846154 0.083333333 0.153846154 12 0 0 13 3R:29933942-29933992 6 CG42557 FBtr0301256 29933904 29934587 GTCTTC 6mer3-8 dme-miR-7-5p 3R + 29933943 29933990 start_codon CG42557 FlyBase G35433.1 ATGGAATCCACGTTCGGTAAAGTCTTCATGTTTCTCACGGACCTCGCT 11 29933971 0.987636358 2 8 103 0.733333333 1.041392685 0.4 0.272727273 0.466666667 11 4 0 11 3R:29933943-29933990 6 11.5 4495 FBgn0260759 80.26 9.18 14.10333333 0.143284326 1.252723312 0.815410069 -7 -7 -7 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 29991254 29991259 - 3R_29991254_29991259_- 1 1 1 0 Acph-1 FBtr0085610|FBtr0085610|FBtr0085610|FBtr0085609|FBtr0085609|FBtr0085609 29991142|29991142|29991142|29991142|29991142|29991142 29991583|29991583|29991583|29991583|29991583|29991583 3R - 29991227 29991283 3'utr Acph-1 FlyBase G55798.1 AGTGAAAGATATGGAATACAAAGACTGTGAATAGCGATCTTGAAGTTGCATACATAT 45 29991256 0.957190171 5 44 178 1 1.72427587 0.150943396 0.181818182 0.320754717 44 0 0 53 3R:29991227-29991283 6 Acph-1 FBtr0085610|FBtr0085610|FBtr0085610|FBtr0085609|FBtr0085609|FBtr0085609 29991142|29991142|29991142|29991142|29991142|29991142 29991583|29991583|29991583|29991583|29991583|29991583 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 29991238 29991290 3'utr Acph-1 FlyBase G42100.1 GTTATTCAGTGAAAGATATGGAATACAAAGACTGTGAATAGCGATCTTGAAGT 49 29991255 0.806846915 7 48 193 0.984375 1.799340549 0.25 0.224489796 0.40625 49 1 0 63 3R:29991238-29991290 6 44.5 4496 FBgn0000032 305.1533333 19.16 28.97333333 0.145828327 2.322546973 1.535895076 -3 -4 -3.5 0.01 dme-miR-980-5p 7mer-A1 AAAAACA 3R 30010039 30010045 + 3R_30010039_30010045_+ 0.782911824 0.782911824 0.782911824 0 Nlp FBtr0334701|FBtr0085552 30009979|30009979 30010352|30010352 3R + 30009927 30010150 stop_codon Nlp FlyBase G46980.1 AAGATCGAGAACGCCGCCGATGGTAAAAATGCCAAGAACAACAAGAAGAAGTAAACTGCTGACCGCCAATCATCCATCGAGGTTTAAGCTATGAACGTGTAGATTTTAAAGCAAAAACAGTTTTAGGCCCTATAATACAATACGATGCATACTGAGAATACAATCTAGTTCCTTTTGAACAGCTCCTTTTACATTCAATTCAAAGACAACGTTGTGTGCTCGGT 40 30010025 0.999429126 25 38 244 0.94 1.672097858 0.22 0.2 0.36 40 3 0 47 3R:30009927-30010150 7 Nlp FBtr0334701|FBtr0085552 30009979|30009979 30010352|30010352 AAAAACA 7mer-A1 dme-miR-980-5p 3R + 30009969 30010134 stop_codon Nlp FlyBase G35448.1 AAGAAGAAGTAAACTGCTGACCGCCAATCATCCATCGAGGTTTAAGCTATGAACGTGTAGATTTTAAAGCAAAAACAGTTTTAGGCCCTATAATACAATACGATGCATACTGAGAATACAATCTAGTTCCTTTTGAACAGCTCCTTTTACATTCAATTCAAAGACA 34 30010030 0.974000295 17 30 187 0.94 1.672097858 0.06 0.441176471 0.62 34 3 0 47 3R:30009969-30010134 7 3.5 4497 FBgn0016685 3113.246667 427.1766667 652.8633333 0.001124228 0.008193331 0.005360999 14 9 11.5 0.01 dme-miR-276a-3p 7mer-m8 AGTTCCT 3R 30010093 30010099 + 3R_30010093_30010099_+ 0.631524679 0.629681061 0.63060287 0.001303622 Nlp FBtr0334701|FBtr0085552 30009979|30009979 30010352|30010352 3R + 30009927 30010150 stop_codon Nlp FlyBase G46980.1 AAGATCGAGAACGCCGCCGATGGTAAAAATGCCAAGAACAACAAGAAGAAGTAAACTGCTGACCGCCAATCATCCATCGAGGTTTAAGCTATGAACGTGTAGATTTTAAAGCAAAAACAGTTTTAGGCCCTATAATACAATACGATGCATACTGAGAATACAATCTAGTTCCTTTTGAACAGCTCCTTTTACATTCAATTCAAAGACAACGTTGTGTGCTCGGT 40 30010113 0.999429126 25 38 244 0.94 1.672097858 0.22 0.2 0.36 40 3 0 47 3R:30009927-30010150 7 Nlp FBtr0334701|FBtr0085552 30009979|30009979 30010352|30010352 AGTTCCT 7mer-m8 dme-miR-276a-3p 3R + 30009969 30010134 stop_codon Nlp FlyBase G35448.1 AAGAAGAAGTAAACTGCTGACCGCCAATCATCCATCGAGGTTTAAGCTATGAACGTGTAGATTTTAAAGCAAAAACAGTTTTAGGCCCTATAATACAATACGATGCATACTGAGAATACAATCTAGTTCCTTTTGAACAGCTCCTTTTACATTCAATTCAAAGACA 34 30010100 0.974000295 17 30 187 0.94 1.672097858 0.06 0.441176471 0.62 34 3 0 47 3R:30009969-30010134 7 7.5 4498 FBgn0016685 3113.246667 427.1766667 652.8633333 0.002409061 0.017557139 0.011487856 -20 -7 -13.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3R 30015607 30015612 - 3R_30015607_30015612_- 0.999807425 0.998735764 0.999271594 0.000757736 Mgat2 FBtr0334705|FBtr0085602|FBtr0100418 30015511|30015511|30015511 30016371|30016371|30016371 3R - 30015576 30015627 3'utr Mgat2 FlyBase G55835.1 TTTTTAATCGTTAGTCCAAAGCGCTTTTATGTATTAGGAATTTTGATTAATC 39 30015601 0.682335088 7 37 334 0.9375 1.653212514 0.291666667 0.179487179 0.333333333 39 3 0 45 3R:30015576-30015627 6 Mgat2 FBtr0100418|FBtr0085602|FBtr0334705 30015511|30015511|30015511 30016371|30016371|30016371 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 30015584 30015625 3'utr Mgat2 FlyBase G42126.1 TTTAATCGTTAGTCCAAAGCGCTTTTATGTATTAGGAATTTT 27 30015601 0.700531653 3 27 233 1 1.62324929 0.166666667 0.37037037 0.595238095 27 0 0 42 3R:30015584-30015625 6 32.5 4499 FBgn0039738 328.6966667 12.42333333 18.86666667 0.098875356 2.616045076 1.722614841 -11 -11 -11 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3R 30015787 30015793 - 3R_30015787_30015793_- 0.823349562 0.823349562 0.823349562 0 Mgat2 FBtr0334705|FBtr0085602|FBtr0100418 30015511|30015511|30015511 30016371|30016371|30016371 3R - 30015755 30015831 3'utr Mgat2 FlyBase G55836.1 AATTTGAGTCTAGATCTAGAGGCAGCAAATCGCATAAACTAGTCATAGCAATGTATTACAGCACATGCGCTATAATA 38 30015797 0.953532656 10 33 189 0.875 1.322219295 0.104166667 0.184210526 0.354166667 38 5 1 42 3R:30015755-30015831 7 Mgat2 FBtr0100418|FBtr0085602|FBtr0334705 30015511|30015511|30015511 30016371|30016371|30016371 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R - 30015742 30015833 3'utr Mgat2 FlyBase G42127.1 TTAATTTGAGTCTAGATCTAGAGGCAGCAAATCGCATAAACTAGTCATAGCAATGTATTACAGCACATGCGCTATAATACATCATAGATCAA 31 30015766 0.926128785 6 25 178 0.803571429 1.176091259 0.053571429 0.451612903 0.696428571 31 9 2 45 3R:30015742-30015833 7 16.5 4500 FBgn0039738 328.6966667 12.42333333 18.86666667 0.050198258 1.328145962 0.874558304 4 -27 -11.5 0.01 dme-miR-282-5p 6mer3-8 AGAGGC 3R 30015809 30015814 - 3R_30015809_30015814_- 0.996353682 0.999998774 0.998176228 0.002577475 Mgat2 FBtr0334705|FBtr0085602|FBtr0100418 30015511|30015511|30015511 30016371|30016371|30016371 3R - 30015755 30015831 3'utr Mgat2 FlyBase G55836.1 AATTTGAGTCTAGATCTAGAGGCAGCAAATCGCATAAACTAGTCATAGCAATGTATTACAGCACATGCGCTATAATA 38 30015797 0.953532656 10 33 189 0.875 1.322219295 0.104166667 0.184210526 0.354166667 38 5 1 42 3R:30015755-30015831 6 Mgat2 FBtr0100418|FBtr0085602|FBtr0334705 30015511|30015511|30015511 30016371|30016371|30016371 AGAGGC 6mer3-8 dme-miR-282-5p 3R - 30015742 30015833 3'utr Mgat2 FlyBase G42127.1 TTAATTTGAGTCTAGATCTAGAGGCAGCAAATCGCATAAACTAGTCATAGCAATGTATTACAGCACATGCGCTATAATACATCATAGATCAA 31 30015815 0.926128785 6 25 178 0.803571429 1.176091259 0.053571429 0.451612903 0.696428571 31 9 2 45 3R:30015742-30015833 6 9 4501 FBgn0039738 328.6966667 12.42333333 18.86666667 0.027380868 0.724443252 0.477031802 -17 1 -8 0.01 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 30016092 30016099 - 3R_30016092_30016099_- 0.63113665 0.63113665 0.63113665 0 Mgat2 FBtr0334705|FBtr0085602|FBtr0100418 30015511|30015511|30015511 30016371|30016371|30016371 3R - 30016063 30016117 3'utr Mgat2 FlyBase G55839.1 TCATACTATAAGTAACCCTCTAGTCACACATTCAATTGGAATCGCCGTGTTGTTG 42 30016099 0.726505363 8 37 207 0.884615385 1.185636577 0 0.19047619 0.346153846 42 4 2 46 3R:30016063-30016117 8 Mgat2 FBtr0100418|FBtr0085602|FBtr0334705 30015511|30015511|30015511 30016371|30016371|30016371 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R - 30016053 30016115 3'utr Mgat2 FlyBase G42129.1 ATACTATAAGTAACCCTCTAGTCACACATTCAATTGGAATCGCCGTGTTGTTGCAACCTCCAA 32 30016099 0.827681364 8 30 139 0.941176471 1.681241237 0 0.40625 0.62745098 32 3 0 48 3R:30016053-30016115 8 32.5 4502 FBgn0039738 328.6966667 12.42333333 18.86666667 0.098875356 2.616045076 1.722614841 0 0 0 0.01 dme-miR-304-5p 6mer2-7 GAGATT 3R 30034240 30034245 + 3R_30034240_30034245_+ 1 1 1 0 Axn FBtr0300600 30031347 30035311 3R + 30034200 30034372 stop_codon Axn FlyBase G46997.1 GACGCACTGCGAGGACCCGGACAGTCCAGTGATTCAGGAAGAGATTGTTAACGACTCCGACATACTGCCGCTATTCGGAGACAAAGCGATGGGTCTTGTCAAGCCATCCGATTAATATTAAGCATTTAGCGTAGATTTTGTATTAAGGCAAATCGTGAGTGTGGCTTGGTGCA 48 30034233 0.955991947 17 48 229 1 1.748188027 0.160714286 0.145833333 0.267857143 48 0 0 56 3R:30034200-30034372 6 Axn FBtr0300600 30031347 30035311 GAGATT 6mer2-7 dme-miR-304-5p 3R + 30034186 30034288 intron-3'utr Axn FlyBase G35462.1 AGGTTCTTCTTCAAGACGCACTGCGAGGACCCGGACAGTCCAGTGATTCAGGAAGAGATTGTTAACGACTCCGACATACTGCCGCTATTCGGAGACAAAGCGA 30 30034232 0.950631355 11 26 113 0.833333333 1.653212514 0.222222222 0.5 0.722222222 30 9 0 45 3R:30034186-30034288 6 20.5 4503 FBgn0026597 1043.036667 27.21666667 41.75333333 0.019654151 0.753214942 0.490978764 7 8 7.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 30034555 30034560 + 3R_30034555_30034560_+ 1 1 1 0 Axn FBtr0085553|FBtr0290030|FBtr0085554|FBtr0334703|FBtr0334702|FBtr0300600|FBtr0085555 30034313|30034313|30034313|30034313|30034313|30031347|30034313 30035311|30035311|30034919|30035311|30035311|30035311|30035311 3R + 30034498 30034575 3'utr Axn FlyBase G46999.1 GTAAGCATCACAAACTACTCTCTGCGGGGGCAATGTATTTTTCTGTACAACAAAAACTGATCTATTCACCAGCCACCC 59 30034562 0.60023803 10 59 259 1 1.84509804 0.085714286 0.169491525 0.3 59 0 0 70 3R:30034498-30034575 6 Axn FBtr0300600|FBtr0085555|FBtr0334702|FBtr0085554|FBtr0334703|FBtr0085553|FBtr0290030 30031347|30034313|30034313|30034313|30034313|30034313|30034313 30035311|30035311|30035311|30034919|30035311|30035311|30035311 TGATCT 6mer3-8 dme-bantam-3p 3R + 30034501 30034575 3'utr Axn FlyBase G35465.1 AGCATCACAAACTACTCTCTGCGGGGGCAATGTATTTTTCTGTACAACAAAAACTGATCTATTCACCAGCCACCC 35 30034562 0.891273105 6 35 150 1 1.72427587 0.037735849 0.371428571 0.58490566 35 0 0 53 3R:30034501-30034575 6 39.5 4504 FBgn0026597 1043.036667 27.21666667 41.75333333 0.037870193 1.451316595 0.946032253 -7 -7 -7 0.01 dme-miR-92b-3p 7mer-A1 TGCAATA 3R 30034828 30034834 + 3R_30034828_30034834_+ 0.782911824 0.782911824 0.782911824 0 Axn FBtr0085553|FBtr0290030|FBtr0085554|FBtr0334703|FBtr0334702|FBtr0300600|FBtr0085555 30034313|30034313|30034313|30034313|30034313|30031347|30034313 30035311|30035311|30034919|30035311|30035311|30035311|30035311 3R + 30034803 30034848 3'utr Axn FlyBase G47000.1 TACCTTTTACTAACTACGGACTGCCTGCAATAAATTTTGTTAATAT 51 30034828 0.906043811 6 48 260 0.983050847 1.763427994 0 0.137254902 0.254237288 51 1 0 58 3R:30034803-30034848 7 Axn FBtr0300600|FBtr0085555|FBtr0334702|FBtr0085554|FBtr0334703|FBtr0085553|FBtr0290030 30031347|30034313|30034313|30034313|30034313|30034313|30034313 30035311|30035311|30035311|30034919|30035311|30035311|30035311 TGCAATA 7mer-A1 dme-miR-92b-3p 3R + 30034783 30034845 3'utr Axn FlyBase G35466.1 CTCGATTGGGATTTGTTTGTTACCTTTTACTAACTACGGACTGCCTGCAATAAATTTTGTTAA 35 30034828 0.971899113 6 34 211 0.955555556 1.156347201 0.088888889 0.228571429 0.4 35 0 2 43 3R:30034783-30034845 7 39 4505 FBgn0026597 1043.036667 27.21666667 41.75333333 0.037390824 1.432945499 0.934057161 0 0 0 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 30042986 30042992 + 3R_30042986_30042992_+ 0.661615645 0.661615645 0.661615645 0 Sry-alpha FBtr0085557|FBtr0346862 30042853|30042853 30043071|30043071 3R + 30042965 30042998 3'utr Sry-alpha FlyBase G47010.1 TAATTAGCTACCTAAGTCAATTGTGTTCTTTACA 22 30042985 0.801680176 2 22 228 1 1.361727836 0 0.045454545 0.086956522 22 0 0 23 3R:30042965-30042998 7 Sry-alpha FBtr0346862|FBtr0085557 30042853|30042853 30043071|30043071 TGTGTTC 7mer-m8 dme-miR-317-3p 3R + 30042965 30042997 3'utr Sry-alpha FlyBase G35473.1 TAATTAGCTACCTAAGTCAATTGTGTTCTTTAC 7 30042985 0.794980966 2 7 77 1 1.176091259 0 0.714285714 0.866666667 7 0 0 15 3R:30042965-30042997 7 14.5 4506 FBgn0003510 16.33666667 1.003333333 1.446666667 0.887573964 14.45182724 10.02304147 1 1 1 0.01 dme-miR-252-5p 6mer3-8 GTACTT 3R 30044839 30044844 + 3R_30044839_30044844_+ 1 1 1 0 Sry-delta FBtr0085558 30044779 30044886 3R + 30044818 30044868 3'utr Sry-delta FlyBase G47019.1 CTAGTGTATTTCCTCCTCTTTGTACTTGATTATTGTAGATTCCTACAAAAT 84 30044838 0.783664992 10 84 1163 1 1.982271233 0.052083333 0.130952381 0.239583333 84 0 0 96 3R:30044818-30044868 6 Sry-delta FBtr0085558 30044779 30044886 GTACTT 6mer3-8 dme-miR-252-5p 3R + 30044802 30044859 3'utr Sry-delta FlyBase G35479.1 AATTGTTTATCTTTCCCTAGTGTATTTCCTCCTCTTTGTACTTGATTATTGTAGATTC 58 30044838 0.994172369 6 58 754 1 1.913813852 0.024390244 0.344827586 0.536585366 58 0 0 82 3R:30044802-30044859 6 70 4507 FBgn0003512 609.7433333 48.67 74.76 0.114802403 1.438257654 0.936329588 1 1 1 0.01 dme-miR-999-3p 7mer-m8 AGTTAAC 3R 30048225 30048231 + 3R_30048225_30048231_+ 0.674514267 0.674514267 0.674514267 0 CG7943 FBtr0085560|FBtr0085559 30048217|30048217 30048665|30048665 3R + 30048217 30048279 stop_codon CG7943 FlyBase G47023.1 AGAACTAGAGTTAACTTAGCTGATTGTACACAAACGGTTACTTCTGCCTTTAGCTAGCCAATT 21 30048254 0.984397498 7 20 165 0.92 1.361727836 0.12 0.142857143 0.28 21 2 0 23 3R:30048217-30048279 7 CG7943 FBtr0085560|FBtr0085559 30048217|30048217 30048665|30048665 AGTTAAC 7mer-m8 dme-miR-999-3p 3R + 30048223 30048277 3'utr CG7943 FlyBase G35483.1 AGAGTTAACTTAGCTGATTGTACACAAACGGTTACTTCTGCCTTTAGCTAGCCAA 18 30048254 0.914500967 8 17 141 0.961538462 1.397940009 0.230769231 0.388888889 0.576923077 18 1 0 25 3R:30048223-30048277 7 2 4508 FBgn0039741 255.38 18.77666667 28.61666667 0.007831467 0.106515178 0.069889342 -29 -29 -29 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3R 30048581 30048587 + 3R_30048581_30048587_+ 0.521223855 0.521223855 0.521223855 0 CG7943 FBtr0085560|FBtr0085559 30048217|30048217 30048665|30048665 3R + 30048565 30048646 3'utr CG7943 FlyBase G47026.1 TGTTCGCCAATAACTTTGTGATTGATTGAAGATACTACAACTGATTAATTAACGCGGTAGATTCAATGTTCTTAAACGAAAA 131 30048580 0.754764705 8 123 1114 0.957575758 1.596597096 0.254545455 0.213740458 0.375757576 131 4 3 158 3R:30048565-30048646 7 CG7943 FBtr0085560|FBtr0085559 30048217|30048217 30048665|30048665 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 30048565 30048607 3'utr CG7943 FlyBase G35484.1 TGTTCGCCAATAACTTTGTGATTGATTGAAGATACTACAACTG 84 30048580 0.707214988 6 81 699 0.968992248 2.096910013 0.333333333 0.345238095 0.573643411 84 4 0 125 3R:30048565-30048607 7 103 4509 FBgn0039741 255.38 18.77666667 28.61666667 0.403320542 5.485531688 3.599301107 1 1 1 0.01 dme-miR-965-3p 6mer3-8 TACGCT 3R 30054557 30054562 + 3R_30054557_30054562_+ 1 1 1 0 CG7946 FBtr0085561|FBtr0310420 30054304|30054304 30054697|30054697 3R + 30054517 30054656 3'utr CG7946 FlyBase G47033.1 AATTCCTTAATTCTGTTTGCCTGCCAGGTGCATGTCGTGTTACGCTGCGCTGATGGGGCTTTTCCTGCTGCATCCGCTTATTACCAGACTAAAAAAAAGGTTTTTGCTTCGAAACCCCTAAATATTTTCTAAGTTTGTAG 31 30054586 0.984737136 14 30 247 1 1.602059991 0.225 0.258064516 0.425 31 0 0 40 3R:30054517-30054656 6 CG7946 FBtr0085561|FBtr0310420 30054304|30054304 30054697|30054697 TACGCT 6mer3-8 dme-miR-965-3p 3R + 30054557 30054610 3'utr CG7946 FlyBase G35487.1 TACGCTGCGCTGATGGGGCTTTTCCTGCTGCATCCGCTTATTACCAGACTAAAA 21 30054586 0.758780715 7 20 152 0.967741935 1.176091259 0 0.333333333 0.548387097 21 0 1 30 3R:30054557-30054610 5 4 4510 FBgn0039743 695.6566667 44.83666667 68.47 0.005749963 0.089212698 0.058419746 -29 -29 -29 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 3R 30057972 30057978 + 3R_30057972_30057978_+ 0.782911824 0.782911824 0.782911824 0 CG7950 FBtr0085563|FBtr0085564 30057934|30057934 30058131|30058131 3R + 30057955 30057983 3'utr CG7950 FlyBase G47036.1 GAGCTAGGTGTGACTTCGTACAAAATAAA 6 30057970 0.717180945 2 6 31 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 3R:30057955-30057983 7 CG7950 FBtr0085563|FBtr0085564 30057934|30057934 30058131|30058131 GTACAAA 7mer-A1 dme-miR-305-5p 3R + 30057955 30057988 3'utr CG7950 FlyBase G35489.1 GAGCTAGGTGTGACTTCGTACAAAATAAATAAAA 17 30057970 0.712796543 4 15 99 0.913043478 1.322219295 0 0.235294118 0.434782609 17 2 0 21 3R:30057955-30057988 7 11.5 4511 FBgn0260468 214.1466667 22.56333333 34.67333333 0.053701513 0.509676466 0.331666987 2 2 2 0.01 dme-miR-34-5p 6mer2-7 ACTGCC 3R 30121077 30121082 + 3R_30121077_30121082_+ 0.999999999 0.99999999 0.999999994 0 sima FBtr0344376|FBtr0344374|FBtr0344373|FBtr0344375 30120757|30120757|30120757|30120149 30121798|30121798|30121798|30121798 3R + 30121059 30121095 3'utr sima FlyBase G47060.1 AGTTTTGTAGCCATGTTAACTGCCTAGAACAGAAGAA 19 30121083 0.956777077 5 17 115 0.904761905 1.278753601 0.19047619 0.105263158 0.19047619 19 2 0 19 3R:30121059-30121095 6 sima FBtr0344376|FBtr0344374|FBtr0344373|FBtr0344375 30120757|30120757|30120757|30120149 30121798|30121798|30121798|30121798 ACTGCC 6mer2-7 dme-miR-34-5p 3R + 30121057 30121124 3'utr sima FlyBase G35504.1 ATAGTTTTGTAGCCATGTTAACTGCCTAGAACAGAAGAATATACACGTATGTAATTTAGTCTTAATGT 17 30121083 0.976756264 6 15 106 0.956521739 1.342422681 0.391304348 0.176470588 0.391304348 17 1 0 22 3R:30121057-30121124 6 17 4512 FBgn0266411 1469.71 34.50666667 52.49333333 0.011566908 0.492658423 0.323850648 -6 -6 -6 0.01 dme-miR-307a-3p 6mer3-8 GGTTGT 3R 30121295 30121300 + 3R_30121295_30121300_+ 1 1 1 0 sima FBtr0344376|FBtr0344374|FBtr0344373|FBtr0344375 30120757|30120757|30120757|30120149 30121798|30121798|30121798|30121798 3R + 30121221 30121345 3'utr sima FlyBase G47061.1 ATTACAATGAGAAAATACCGATGAAAAATGTTCATAGTTTTTTGCTGGAAGGCTCAAACAAGTTTTTTGGTGATGGTTGTATTCTGGTTTATAACTTTCAAGCAAAAATGCTGTGACGAGAAAAA 62 30121297 0.979712637 8 60 384 0.987341772 1.892094603 0.569620253 0.225806452 0.392405063 62 1 0 78 3R:30121221-30121345 6 sima FBtr0344376|FBtr0344374|FBtr0344373|FBtr0344375 30120757|30120757|30120757|30120149 30121798|30121798|30121798|30121798 GGTTGT 6mer3-8 dme-miR-307a-3p 3R + 30121262 30121342 3'utr sima FlyBase G35505.1 TTGCTGGAAGGCTCAAACAAGTTTTTTGGTGATGGTTGTATTCTGGTTTATAACTTTCAAGCAAAAATGCTGTGACGAGAA 44 30121297 0.986861611 10 44 384 1 1.857332496 0.680555556 0.454545455 0.666666667 44 0 0 72 3R:30121262-30121342 6 28.5 4513 FBgn0266411 1469.71 34.50666667 52.49333333 0.019391581 0.825927357 0.542926086 -2 -2 -2 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 30121540 30121545 + 3R_30121540_30121545_+ 1 1 1 0 sima FBtr0344376|FBtr0344374|FBtr0344373|FBtr0344375 30120757|30120757|30120757|30120149 30121798|30121798|30121798|30121798 3R + 30121528 30121567 3'utr sima FlyBase G47062.1 ACCCGATTCAGTTGATCTAAACTTCAAATACTTTGAGCAT 21 30121539 0.979271172 3 20 145 1 1.431363764 0 0.285714286 0.444444444 21 0 0 27 3R:30121528-30121567 6 sima FBtr0344376|FBtr0344374|FBtr0344373|FBtr0344375 30120757|30120757|30120757|30120149 30121798|30121798|30121798|30121798 TGATCT 6mer3-8 dme-bantam-3p 3R + 30121528 30121555 3'utr sima FlyBase G35506.1 ACCCGATTCAGTTGATCTAAACTTCAAA 17 30121539 0.705496706 3 17 119 1 1.342422681 0 0.294117647 0.454545455 17 0 0 22 3R:30121528-30121555 6 18.5 4514 FBgn0266411 1469.71 34.50666667 52.49333333 0.012587517 0.536128284 0.352425705 1 1 1 0.01 dme-miR-12-5p 7mer-A1 ATACTCA 3R 30213387 30213393 - 3R_30213387_30213393_- 0.823349442 0.823349562 0.823349502 1.41E-07 CecB FBtr0085640 30213313 30213475 3R - 30213368 30213404 3'utr CecB FlyBase G55877.1 AATGAAAATAGATACTCAATGCCAATGTCAAATTATT 8 30213385 0.946256182 4 8 34 1 1.146128036 0.071428571 0.375 0.642857143 8 0 0 14 3R:30213368-30213404 7 CecB FBtr0085640 30213313 30213475 ATACTCA 7mer-A1 dme-miR-12-5p 3R - 30213366 30213404 3'utr CecB FlyBase G42159.1 AATGAAAATAGATACTCAATGCCAATGTCAAATTATTAA 11 30213396 0.891514199 4 11 55 1 1.176091259 0 0.272727273 0.466666667 11 0 0 15 3R:30213366-30213404 7 9.5 4515 FBgn0000278 26.33333333 8.696666667 13.18 0.360759494 1.092372557 0.720789074 -8 3 -2.5 0.01 dme-miR-8-3p 8mer-A1 CAGTATTA 3R 30361140 30361147 + 3R_30361140_30361147_+ 0.671698124 0.671698124 0.671698124 0 hdc FBtr0085619|FBtr0085620|FBtr0330311 30360539|30360539|30360539 30362093|30362093|30372382 3R + 30361107 30361179 3'utr hdc FlyBase G47081.1 AAGCAACAACAATAGCAGCAGCAGCAGCAGCAGCAGTATTAGTAACTTAATCATTAGCCATAATTCAGCCAGC 8 30361153 0.973526592 4 7 47 0.875 0.84509804 0 0 0 8 1 0 7 3R:30361107-30361179 8 hdc FBtr0085620|FBtr0330311|FBtr0085619 30360539|30360539|30360539 30362093|30372382|30362093 CAGTATTA 8mer-A1 dme-miR-8-3p 3R + 30361123 30361157 3'utr hdc FlyBase G35515.1 AGCAGCAGCAGCAGCAGCAGTATTAGTAACTTAAT 6 30361149 0.972962166 2 5 25 0.888888889 0.903089987 0 0.166666667 0.444444444 6 1 0 8 3R:30361123-30361157 8 6.5 4516 FBgn0010113 3260.306667 58.23333333 89.73 0.001993677 0.11161992 0.072439541 -13 -9 -11 0.01 dme-miR-307a-3p 6mer2-7 GTTGTG 3R 30361341 30361346 + 3R_30361341_30361346_+ 1 0.999999984 0.999999992 0 hdc FBtr0085619|FBtr0085620|FBtr0330311 30360539|30360539|30360539 30362093|30362093|30372382 3R + 30361258 30361360 3'utr hdc FlyBase G47083.1 AGCGGCTGCTCCTCGGGCAGTGGATCGCAGCCCTCGTTGAGTCCGACGGCCAGCAGCAATGGCAACGATGGCTCCAAGATGATGTTGTGGGCGGCCCAAAGTT 18 30361340 0.970046286 9 18 102 1 1.278753601 0.368421053 0.055555556 0.105263158 18 0 0 19 3R:30361258-30361360 6 hdc FBtr0085620|FBtr0330311|FBtr0085619 30360539|30360539|30360539 30362093|30372382|30362093 GTTGTG 6mer2-7 dme-miR-307a-3p 3R + 30361324 30361410 3'utr hdc FlyBase G35517.1 GATGGCTCCAAGATGATGTTGTGGGCGGCCCAAAGTTCGCCACAAAATGCTGCAACACTCAGGGATGGATTCAAGGAGTTGCAGCGC 8 30361340 0.953415864 5 8 34 1 1.113943352 0.230769231 0.25 0.538461538 8 0 0 13 3R:30361324-30361410 6 9 4517 FBgn0010113 3260.306667 58.23333333 89.73 0.002760477 0.154550658 0.100300903 1 1 1 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 30361605 30361610 + 3R_30361605_30361610_+ 1 1 1 0 hdc FBtr0085619|FBtr0085620|FBtr0330311 30360539|30360539|30360539 30362093|30362093|30372382 3R + 30361569 30361616 3'utr hdc FlyBase G47086.1 ACCGGCCAGCAGCCACGACATCTTCACCGATCTCCTGTGCAACCTGAG 323 30361604 0.975646975 7 308 1952 0.948529412 1.888740961 0.529411765 0.207430341 0.37254902 323 17 4 387 3R:30361569-30361616 6 hdc FBtr0085620|FBtr0330311|FBtr0085619 30360539|30360539|30360539 30362093|30372382|30362093 GTGCAA 6mer3-8 dme-miR-92b-3p 3R + 30361570 30361616 3'utr hdc FlyBase G35519.1 CCGGCCAGCAGCCACGACATCTTCACCGATCTCCTGTGCAACCTGAG 223 30361604 0.974356711 6 217 1342 0.974576271 2.06069784 0.587570621 0.385650224 0.61299435 223 7 2 345 3R:30361570-30361616 6 270.5 4518 FBgn0010113 3260.306667 58.23333333 89.73 0.082967655 4.645105896 3.014599354 1 1 1 0.01 dme-miR-1006-3p 6mer3-8 CGAATT 3R 30361679 30361684 + 3R_30361679_30361684_+ 1 1 1 0 hdc FBtr0085619|FBtr0085620|FBtr0330311 30360539|30360539|30360539 30362093|30362093|30372382 3R + 30361682 30361756 3'utr hdc FlyBase G47087.1 ATTCCTCCTCGTCGGCCGGGGAACTCCTGGAGGCGGCCAATATCTGGAGGTTTCCAGAGTACGCCAGTAGTCAGC 10 30361707 0.848718473 6 7 48 0.7 0.84509804 0.1 0 0 10 3 0 7 3R:30361682-30361756 2 hdc FBtr0085620|FBtr0330311|FBtr0085619 30360539|30360539|30360539 30362093|30372382|30362093 CGAATT 6mer3-8 dme-miR-1006-3p 3R + 30361665 30361716 3'utr hdc FlyBase G35520.1 CTCCGACGTCAGCTCGAATTCCTCCTCGTCGGCCGGGGAACTCCTGGAGGCG 5 30361684 0.941133045 4 5 23 1 0.903089987 0.375 0.6 0.75 5 0 0 8 3R:30361665-30361716 6 3.5 4519 FBgn0010113 3260.306667 58.23333333 89.73 0.001073519 0.060103034 0.039005907 -28 -5 -16.5 0.01 dme-miR-2b-2-5p 6mer3-8 TTGAAG 3R 30362295 30362300 + 3R_30362295_30362300_+ 1 0.999999997 0.999999999 0 hdc FBtr0330311 30360539 30372382 3R + 30362255 30362309 3'utr hdc FlyBase G47091.2 TTTACATCACGATTGAGGGAAAAGTTTTATTTAGCAAAAATTGAAGGCAGGGCAT 16 30362268 0.969111864 8 13 82 0.904761905 0.977723605 0.095238095 0.1875 0.380952381 16 1 1 19 3R:30362255-30362309 6 hdc FBtr0330311 30360539 30372382 TTGAAG 6mer3-8 dme-miR-2b-2-5p 3R + 30362254 30362379 3'utr hdc FlyBase G35523.1 ATTTACATCACGATTGAGGGAAAAGTTTTATTTAGCAAAAATTGAAGGCAGGGCATTAAATTGTTTAAACAAATCATGATAATTGCTGTGCTGCTCAATAACACAAAAAATCATTAAAATAAAAGG 24 30362268 0.974045984 11 21 134 0.911764706 1.491361694 0.088235294 0.375 0.558823529 24 3 0 31 3R:30362254-30362379 6 4 4520 FBgn0010113 3260.306667 58.23333333 89.73 0.001226878 0.068689181 0.044578179 27 27 27 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG 3R 30362338 30362343 + 3R_30362338_30362343_+ 1 0.999999997 0.999999999 0 hdc FBtr0330311 30360539 30372382 3R + 30362321 30362409 3'utr hdc FlyBase G47092.1 AACAAATCATGATAATTGCTGTGCTGCTCAATAACACAAAAAATCATTAAAATAAAAGGAGAAGGAGTAGAGTAGGAGAGTAAAACAGG 22 30362337 0.973597643 10 19 105 0.88 1.041392685 0.12 0.136363636 0.24 22 2 1 22 3R:30362321-30362409 6 hdc FBtr0330311 30360539 30372382 GCTGTG 6mer2-7 dme-miR-1008-3p 3R + 30362254 30362379 3'utr hdc FlyBase G35523.1 ATTTACATCACGATTGAGGGAAAAGTTTTATTTAGCAAAAATTGAAGGCAGGGCATTAAATTGTTTAAACAAATCATGATAATTGCTGTGCTGCTCAATAACACAAAAAATCATTAAAATAAAAGG 24 30362336 0.974045984 11 21 134 0.911764706 1.491361694 0.088235294 0.375 0.558823529 24 3 0 31 3R:30362254-30362379 6 11 4521 FBgn0010113 3260.306667 58.23333333 89.73 0.003373916 0.188895249 0.122589992 1 2 1.5 0.01 dme-miR-184-5p 6mer2-7 GATAAG 3R 30362497 30362502 + 3R_30362497_30362502_+ 0.999634096 0.999999997 0.999817046 0.00025873 hdc FBtr0330311 30360539 30372382 3R + 30362490 30362626 3'utr hdc FlyBase G47093.1 CATAATCGATAAGTTGCACATCTTTACCTAAGCGATTGGTAATTATTCCTAGTTTTAGTAAGCGAAAGGAGAACCTCTGGAACCGATTTAGTTTCTCGCTCCAGTTCATAAAAAAAAGTTCAGTTAGTCCTCAGAGT 200 30362526 0.901149659 21 188 1992 0.940425532 1.742332282 0.204255319 0.135 0.263829787 200 11 3 221 3R:30362490-30362626 6 hdc FBtr0330311 30360539 30372382 GATAAG 6mer2-7 dme-miR-184-5p 3R + 30362489 30362578 3'utr hdc FlyBase G35524.1 ACATAATCGATAAGTTGCACATCTTTACCTAAGCGATTGGTAATTATTCCTAGTTTTAGTAAGCGAAAGGAGAACCTCTGGAACCGATTT 112 30362526 0.904345784 15 105 1044 0.919075145 1.599337133 0.242774566 0.4375 0.63583815 112 11 3 159 3R:30362489-30362578 6 44 4522 FBgn0010113 3260.306667 58.23333333 89.73 0.013495663 0.755580996 0.490359969 -29 -29 -29 0.01 dme-bantam-3p 6mer2-7 GATCTC 3R 30362933 30362938 + 3R_30362933_30362938_+ 1 0.999999997 0.999999998 0 hdc FBtr0330311 30360539 30372382 3R + 30362847 30362998 3'utr hdc FlyBase G47095.1 AGTCTAAGTGTTAGGTTATAGCGATCTTCTTGTATATGTCTAGGGTTCTTCTCTTTGTCTAAATAGCAGAGCAGCCGTATGTGATGGATCTCTAAAGGTAGAGTGAGGACCCCGCAGGTGCGAGCAAACCACATGCAGGCACTCACTATCGA 375 30362939 0.939350247 27 334 2464 0.913242009 1.488116639 0.351598174 0.149333333 0.271689498 375 26 12 400 3R:30362847-30362998 6 hdc FBtr0330311 30360539 30372382 GATCTC 6mer2-7 dme-bantam-3p 3R + 30362842 30362994 3'utr hdc FlyBase G35525.1 TATTAAGTCTAAGTGTTAGGTTATAGCGATCTTCTTGTATATGTCTAGGGTTCTTCTCTTTGTCTAAATAGCAGAGCAGCCGTATGTGATGGATCTCTAAAGGTAGAGTGAGGACCCCGCAGGTGCGAGCAAACCACATGCAGGCACTCACTA 297 30362939 0.794945248 26 269 2013 0.907756813 1.335457901 0.381551363 0.420875421 0.639412998 297 25 19 433 3R:30362842-30362994 6 224.5 4523 FBgn0010113 3260.306667 58.23333333 89.73 0.068858553 3.855180309 2.501950295 -6 -6 -6 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3R 30363101 30363106 + 3R_30363101_30363106_+ 1 0.999999997 0.999999998 0 hdc FBtr0330311 30360539 30372382 3R + 30363070 30363160 3'utr hdc FlyBase G47096.2 AATTTATAGAGCGGTTCAATGTTTCCTGTTTTGTGTTTATTCCGTGCTTAGAAAAGTCACCAAAATCCTGGGGTATAAGTCCTTCCCAATC 83 30363089 0.85513454 14 79 786 0.95 1.977723605 0.09 0.180722892 0.32 83 5 0 95 3R:30363070-30363160 6 hdc FBtr0330311 30360539 30372382 TGTGTT 6mer3-8 dme-miR-317-3p 3R + 30363068 30363166 3'utr hdc FlyBase G35527.1 ACAATTTATAGAGCGGTTCAATGTTTCCTGTTTTGTGTTTATTCCGTGCTTAGAAAAGTCACCAAAATCCTGGGGTATAAGTCCTTCCCAATCTCTCAG 58 30363089 0.847118283 14 51 577 0.895348837 1.108339475 0.104651163 0.275862069 0.511627907 58 4 5 77 3R:30363068-30363166 6 39 4524 FBgn0010113 3260.306667 58.23333333 89.73 0.011962065 0.669719519 0.434637245 12 12 12 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 30363285 30363290 + 3R_30363285_30363290_+ 0.999999999 0.999999997 0.999999998 0 hdc FBtr0330311|FBtr0330311|FBtr0330311 30360539|30360539|30360539 30372382|30372382|30372382 3R + 30363269 30363300 3'utr hdc FlyBase G47097.1 AAAATAACTTTCCCGTCTGTGAAATTTTTAAT 10 30363283 0.635331799 7 9 88 0.818181818 0.954242509 0.090909091 0.1 0.181818182 10 2 0 9 3R:30363269-30363300 6 hdc FBtr0330311|FBtr0330311|FBtr0330311 30360539|30360539|30360539 30372382|30372382|30372382 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 30363273 30363294 3'utr hdc FlyBase G35528.1 TAACTTTCCCGTCTGTGAAATT 5 30363284 0.744774703 2 5 37 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:30363273-30363294 6 7 4525 FBgn0010113 3260.306667 58.23333333 89.73 0.002147037 0.120206068 0.078011813 2 1 1.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 30364315 30364320 + 3R_30364315_30364320_+ 1 0.999999997 0.999999998 0 hdc FBtr0330311|FBtr0330311|FBtr0330311 30360539|30360539|30360539 30372382|30372382|30372382 3R + 30364296 30364336 3'utr hdc FlyBase G47104.1 GAAAAACCTCCTCGAATAACTGTGAAATCCCCTTCCTTAGA 78 30364323 0.788175108 6 70 525 0.898876404 1.903089987 0.02247191 0.102564103 0.213483146 78 9 0 80 3R:30364296-30364336 6 hdc FBtr0330311|FBtr0330311|FBtr0330311 30360539|30360539|30360539 30372382|30372382|30372382 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 30364294 30364333 3'utr hdc FlyBase G35534.1 TTGAAAAACCTCCTCGAATAACTGTGAAATCCCCTTCCTT 38 30364323 0.827664009 5 35 241 0.947368421 1.431363764 0 0.368421053 0.578947368 38 2 1 54 3R:30364294-30364333 6 58 4526 FBgn0010113 3260.306667 58.23333333 89.73 0.017789738 0.995993131 0.646383595 -8 -8 -8 0.01 dme-miR-277-3p 7mer-A1 GCATTTA 3R 30364756 30364762 + 3R_30364756_30364762_+ 0.823349562 0.82334956 0.823349561 0 hdc FBtr0330311 30360539 30372382 3R + 30364673 30364803 3'utr hdc FlyBase G47106.1 AAGTACATACCCTATACCATATACCCTATACCGTATAAAACGTACACCTAACTAACCTAAATTGATAGAAACTACACTTTTTGGCATTTACTTGAGAGGATTATATATAAGTTTGGCACAGTTATATATAA 68 30364759 0.976689973 16 59 624 0.85 1.531478917 0.2875 0.132352941 0.2625 68 11 1 68 3R:30364673-30364803 7 hdc FBtr0330311 30360539 30372382 GCATTTA 7mer-A1 dme-miR-277-3p 3R + 30364705 30364785 3'utr hdc FlyBase G35537.1 GTATAAAACGTACACCTAACTAACCTAAATTGATAGAAACTACACTTTTTGGCATTTACTTGAGAGGATTATATATAAGTT 30 30364760 0.994444207 11 20 263 0.708333333 1.054357662 0.291666667 0.566666667 0.729166667 30 12 2 34 3R:30364705-30364785 7 34.5 4527 FBgn0010113 3260.306667 58.23333333 89.73 0.010581827 0.59244419 0.384486794 -3 -4 -3.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 30365656 30365661 + 3R_30365656_30365661_+ 1 0.999999998 0.999999999 0 hdc FBtr0330311 30360539 30372382 3R + 30365639 30365687 3'utr hdc FlyBase G47111.1 CCTTTTGAATCTTTTCGTGATCTTCAGTTACTGAAACATGCCAAAATCC 10 30365652 0.84015546 6 9 79 0.909090909 0.698970004 0.090909091 0.1 0.181818182 10 0 1 10 3R:30365639-30365687 6 hdc FBtr0330311 30360539 30372382 TGATCT 6mer3-8 dme-bantam-3p 3R + 30365599 30365687 3'utr hdc FlyBase G35542.1 ATATTTTATGTTCAACAAATGAAATATTTGCGCGCCTTTCCCTTTTGAATCTTTTCGTGATCTTCAGTTACTGAAACATGCCAAAATCC 12 30365655 0.990645419 8 12 112 1 1.204119983 0.0625 0.333333333 0.5 12 0 0 16 3R:30365599-30365687 6 8 4528 FBgn0010113 3260.306667 58.23333333 89.73 0.002453757 0.137378363 0.089156358 4 1 2.5 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 3R 30365802 30365808 + 3R_30365802_30365808_+ 0.782911824 0.782911822 0.782911823 0 hdc FBtr0330311 30360539 30372382 3R + 30365779 30365856 3'utr hdc FlyBase G47113.1 CTCAGATCATCTGATGACGAAATGTACAAATTGGTGAAGTTTAGGCACTTTCAACCGCAGTCCTCATCCGAATTCCCA 22 30365809 0.85876262 8 21 149 0.961538462 1.397940009 0.346153846 0.136363636 0.269230769 22 1 0 25 3R:30365779-30365856 7 hdc FBtr0330311 30360539 30372382 GTACAAA 7mer-A1 dme-miR-305-5p 3R + 30365777 30365817 3'utr hdc FlyBase G35543.1 TTCTCAGATCATCTGATGACGAAATGTACAAATTGGTGAAG 17 30365810 0.715907938 6 15 125 0.904761905 1.278753601 0.714285714 0.235294118 0.380952381 17 2 0 19 3R:30365777-30365817 7 17.5 4529 FBgn0010113 3260.306667 58.23333333 89.73 0.005367593 0.300515169 0.195029533 -7 -8 -7.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 30366074 30366079 + 3R_30366074_30366079_+ 1 0.999999998 0.999999999 0 hdc FBtr0330311 30360539 30372382 3R + 30366051 30366103 3'utr hdc FlyBase G47114.1 AATGTGTAATATATGTATACTTTGTACCTTTTTATGTTATACACAAGTCCCCA 79 30366081 0.903100435 10 75 978 0.970588235 1.995635195 0.098039216 0.227848101 0.401960784 79 3 0 99 3R:30366051-30366103 6 hdc FBtr0330311 30360539 30372382 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 30366045 30366095 3'utr hdc FlyBase G35544.1 ATTCGTAATGTGTAATATATGTATACTTTGTACCTTTTTATGTTATACACA 65 30366081 0.827728355 9 65 833 1 1.954242509 0.233333333 0.307692308 0.5 65 0 0 90 3R:30366045-30366095 6 71.5 4530 FBgn0010113 3260.306667 58.23333333 89.73 0.021930452 1.227819118 0.796834949 -7 -7 -7 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 30368996 30369002 + 3R_30368996_30369002_+ 0.727891414 0.752761397 0.740326406 0.017585746 hdc FBtr0330311|FBtr0330311|FBtr0330311 30360539|30360539|30360539 30372382|30372382|30372382 3R + 30368980 30369017 3'utr hdc FlyBase G47119.1 AAAGAGCTCCCCGATATGTGATATTTAATTGGTAATTG 14 30368994 0.800616335 4 14 110 1 1.230448921 0.058823529 0.214285714 0.352941176 14 0 0 17 3R:30368980-30369017 7 hdc FBtr0330311|FBtr0330311|FBtr0330311 30360539|30360539|30360539 30372382|30372382|30372382 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 30368982 30369005 3'utr hdc FlyBase G35546.1 AGAGCTCCCCGATATGTGATATTT 5 30368994 0.81224685 2 5 35 1 0.84509804 0 0.4 0.571428571 5 0 0 7 3R:30368982-30369005 7 9.5 4531 FBgn0010113 3260.306667 58.23333333 89.73 0.002913836 0.163136806 0.105873175 2 2 2 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3R 30385761 30385767 - 3R_30385761_30385767_- 0.521223855 0.521223855 0.521223855 0 Fer1HCH FBtr0085635 30385571 30386297 3R - 30385639 30385793 3'utr Fer1HCH FlyBase G55884.2 ACGTCTGTTCTTTCTTATCAACCACTTGTGATTTCCGTACACCTCGGGAGGGGGCTCCACATTATGCAATCGCCGAGATTTCGCCTAGGCTTAAGTGGAATCGCTCATTCGCATAGTAAGACACTCAGCACAACCCATTCAATACATCCTATATC 411 30385761 0.830147327 27 377 2895 0.915662651 1.579783597 0.06626506 0.175182482 0.319277108 411 31 11 456 3R:30385639-30385793 7 Fer1HCH FBtr0085631|FBtr0085634|FBtr0306588|FBtr0085635|FBtr0085633|FBtr0085632 30385571|30385571|30385571|30385571|30385571|30385571 30385983|30385983|30385983|30386297|30385983|30385983 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 30385655 30385863 NoAnnotation G42166.1 AGCCAAGTCGGCGACTGGCCAATAAATTATCCGTTCGACTGCGATCCTCAAACCAGCACAGCAAAATTCCACGTCTGTTCTTTCTTATCAACCACTTGTGATTTCCGTACACCTCGGGAGGGGGCTCCACATTATGCAATCGCCGAGATTTCGCCTAGGCTTAAGTGGAATCGCTCATTCGCATAGTAAGACACTCAGCACAACCCATT 289 30385761 0.969122581 39 278 1979 0.968609865 2.334453751 0.047085202 0.401384083 0.612107623 289 13 1 432 3R:30385655-30385863 7 223.5 4532 FBgn0015222 3048.623333 308.1333333 465.1 0.073311779 0.725335353 0.480541819 -6 -6 -6 0.01 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 3R 30386109 30386115 - 3R_30386109_30386115_- 0.823349562 0.823349562 0.823349562 0 Fer1HCH FBtr0085635 30385571 30386297 3R - 30386085 30386144 5'utr Fer1HCH FlyBase G55885.1 AGCCCTACAACCACTACCACCTGGTGGACTACCTGACCGGTGTCTATCTGGAGGAGCAGC 16 30386121 0.958667426 6 15 75 0.947368421 1.255272505 0 0.1875 0.315789474 16 1 0 18 3R:30386085-30386144 7 Fer1HCH FBtr0085635 30385571 30386297 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R - 30386073 30386148 5'utr Fer1HCH FlyBase G42167.1 AACAAGCCCTACAACCACTACCACCTGGTGGACTACCTGACCGGTGTCTATCTGGAGGAGCAGCTCCACGGACAGC 10 30386119 0.934152345 6 8 41 0.789473684 1.176091259 0 0.4 0.684210526 10 4 0 15 3R:30386073-30386148 7 11 4533 FBgn0015222 3048.623333 308.1333333 465.1 0.003608186 0.035698832 0.023650828 6 4 5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3R 30419200 30419206 - 3R_30419200_30419206_- 0.661615511 0.661615511 0.661615511 0 CG2217 FBtr0344524|FBtr0085630|FBtr0303200 30418765|30418765|30418765 30421490|30421490|30421490 3R - 30419188 30419218 5'utr CG2217 FlyBase G55894.1 ATTCTGCTGGCTTCTAGTCGCCGTTCTACTC 22 30419207 0.750455744 4 22 158 1 1.397940009 0.32 0.090909091 0.2 22 0 0 25 3R:30419188-30419218 7 CG2217 FBtr0085630|FBtr0303200|FBtr0344524 30418765|30418765|30418765 30421490|30421490|30421490 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3R - 30419186 30419218 5'utr CG2217 FlyBase G42172.1 ATTCTGCTGGCTTCTAGTCGCCGTTCTACTCTT 9 30419207 0.74128238 3 9 67 1 1.176091259 0.066666667 0.444444444 0.666666667 9 0 0 15 3R:30419186-30419218 7 15.5 4534 FBgn0027544 12.99 0.683333333 1.056666667 1.193225558 22.68292683 14.66876972 1 1 1 0.01 dme-miR-8-3p 6mer3-8 CAGTAT 3R 30425827 30425832 - 3R_30425827_30425832_- 1 1 1 0 CG2218 FBtr0085627|FBtr0339142 30425425|30425658 30426058|30426058 3R - 30425775 30425898 3'utr CG2218 FlyBase G55899.1 ATCGCAAAATCGCAGTTAAGCCAAATGTGTACACGCGCGAGTCCCTCCCGATTCGGCAGTATGTATCAGTATCAGGTCACGTTTAGTCATAGAGCAGATTACGGATTACCGATTAGCAATAGAG 56 30425833 0.854415691 15 54 354 0.969230769 1.498310554 0.153846154 0.107142857 0.230769231 56 1 1 63 3R:30425775-30425898 6 CG2218 FBtr0085627|FBtr0339142 30425425|30425658 30426058|30426058 CAGTAT 6mer3-8 dme-miR-8-3p 3R - 30425764 30425863 3'utr CG2218 FlyBase G42177.1 CGCGAGTCCCTCCCGATTCGGCAGTATGTATCAGTATCAGGTCACGTTTAGTCATAGAGCAGATTACGGATTACCGATTAGCAATAGAGAGTGCGCGCCT 28 30425833 0.981157855 8 23 172 0.833333333 1.544068044 0.166666667 0.392857143 0.595238095 28 7 0 35 3R:30425764-30425863 6 24 4535 FBgn0039767 282 15.08666667 22.94 0.085106383 1.590808661 1.046207498 1 1 1 0.01 dme-miR-92b-3p 6mer2-7 TGCAAT 3R 30445694 30445699 - 3R_30445694_30445699_- 1 1 1 0 aralar1 FBtr0085693|FBtr0306586|FBtr0330290|FBtr0085692|FBtr0085694 30445633|30445633|30445633|30445633|30445633 30446204|30446204|30446168|30446204|30446204 3R - 30445661 30445713 3'utr aralar1 FlyBase G55910.1 TCAAGCAAAGGAAATGCAATGAATGACCTCTTAGCTAATAATGAATAATTAAA 177 30445683 0.681530658 8 169 1092 0.963963964 1.728353782 0.085585586 0.209039548 0.369369369 177 5 3 214 3R:30445661-30445713 6 aralar1 FBtr0085693|FBtr0085694|FBtr0085692|FBtr0330290|FBtr0306586 30445633|30445633|30445633|30445633|30445633 30446204|30446204|30446204|30446168|30446204 TGCAAT 6mer2-7 dme-miR-92b-3p 3R - 30445665 30445764 3'utr aralar1 FlyBase G42186.1 TTAAAGCGATAAAACCTTTTAATCTTAGTACGAATTTGTTCAAAACAATTATCAAGCAAAGGAAATGCAATGAATGACCTCTTAGCTAATAATGAATAAT 120 30445683 0.975162217 9 119 748 0.988826816 2.247973266 0.094972067 0.383333333 0.586592179 120 2 0 177 3R:30445665-30445764 6 133.5 4536 FBgn0028646 330.21 14.42 22.09333333 0.40428818 9.257975035 6.042546771 -16 -16 -16 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3R 30456795 30456801 - 3R_30456795_30456801_- 0.443131018 0.443131018 0.443131018 0 CG2224 FBtr0331358 30456439 30457058 3R - 30456787 30456852 3'utr CG2224 FlyBase G55921.1 TTGCGTTCCGGCCTCTTGGTTCGTTGCATTCTTTCACTTAAGAACCTCTAATGTGATTTTCAATTG 37 30456795 0.826107322 10 37 283 1 1.73239376 0.111111111 0.378378378 0.574074074 37 0 0 54 3R:30456787-30456852 7 CG2224 FBtr0331358 30456439 30457058 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 30456765 30456857 3'utr CG2224 FlyBase G42194.1 GTTTATTGCGTTCCGGCCTCTTGGTTCGTTGCATTCTTTCACTTAAGAACCTCTAATGTGATTTTCAATTGTGGCTTACCCTTGCGTTCGTTA 31 30456795 0.98484663 13 29 239 0.875 1.243038049 0.15 0.225806452 0.4 31 4 1 35 3R:30456765-30456857 7 28.5 4537 FBgn0039773 322.3166667 18.33333333 28.13666667 0.088422359 1.554545455 1.012913162 -6 -6 -6 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 30584252 30584257 - 3R_30584252_30584257_- 1 0.784322588 0.892161294 0.152506952 CG9717 FBtr0085679|FBtr0085679|FBtr0085679 30584018|30584018|30584018 30584547|30584547|30584547 3R - 30584245 30584284 3'utr CG9717 FlyBase G55931.1 ATTTATTTGGCCTCTAACGGCGAAACGCTGTGAATTCCAG 16 30584250 0.789106849 3 16 84 1 1.342422681 0 0.3125 0.5 16 0 0 22 3R:30584245-30584284 6 CG9717 FBtr0085679|FBtr0085679|FBtr0085679 30584018|30584018|30584018 30584547|30584547|30584547 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 30584247 30584284 3'utr CG9717 FlyBase G42200.1 ATTTATTTGGCCTCTAACGGCGAAACGCTGTGAATTCC 7 30584251 0.695792353 4 7 39 1 1 0.1 0.142857143 0.4 7 0 0 10 3R:30584247-30584284 6 10 4538 FBgn0039789 0 0 0 Inf Inf Inf -7 -6 -6.5 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 30786718 30786725 + 3R_30786718_30786725_+ 0.500120318 0.500120318 0.500120318 0 zfh1 FBtr0331180|FBtr0085701|FBtr0085702 30786658|30786202|30786202 30789202|30789202|30787177 3R + 30786690 30786765 3'utr zfh1 FlyBase G47224.1 AAGCCAGCCAAGCCAGCACTTACAGGCTGTACTTAAAAACCGACGAACAGAAAATCTCAAAATGTGCAGGAACACA 200 30786717 0.947028463 9 188 797 0.950207469 1.882714228 0.290456432 0.165 0.307053942 200 10 2 229 3R:30786690-30786765 8 zfh1 FBtr0331180|FBtr0085701|FBtr0085702 30786658|30786202|30786202 30789202|30789202|30787177 GTACTTAA 8mer-A1 dme-miR-252-5p 3R + 30786691 30786753 3'utr zfh1 FlyBase G35627.1 AGCCAGCCAAGCCAGCACTTACAGGCTGTACTTAAAAACCGACGAACAGAAAATCTCAAAATG 96 30786717 0.943372587 6 93 382 0.98540146 2.130333768 0.248175182 0.302083333 0.510948905 96 2 0 135 3R:30786691-30786753 8 137.5 4539 FBgn0004606 2785.276667 51.94333333 79.77333333 0.04936673 2.647115446 1.723633629 1 1 1 0.01 dme-miR-8-3p 6mer2-7 AGTATT 3R 30786939 30786944 + 3R_30786939_30786944_+ 1 1 1 0 zfh1 FBtr0331180|FBtr0085701|FBtr0085702 30786658|30786202|30786202 30789202|30789202|30787177 3R + 30786835 30787005 3'utr zfh1 FlyBase G47226.1 TTTTTTATAGCCATATAGACAGGGGAAATGTAAGAAGCCGTAGTTGAAAACCTTTCGTTTGAGCGAATTTATTATTTTTACAATGTTGCAACCACTTTGTTCTTAGTATTTTATTAGTTTAGCTTAACTTAGCTTACCGCCTAAGTTCGAGCGCAGGGCTGAATCATTTTG 139 30786937 0.929754304 33 134 1188 0.964497041 1.911157609 0.272189349 0.18705036 0.331360947 139 5 1 163 3R:30786835-30787005 6 zfh1 FBtr0331180|FBtr0085701|FBtr0085702 30786658|30786202|30786202 30789202|30789202|30787177 AGTATT 6mer2-7 dme-miR-8-3p 3R + 30786834 30787013 3'utr zfh1 FlyBase G35628.1 ATTTTTTATAGCCATATAGACAGGGGAAATGTAAGAAGCCGTAGTTGAAAACCTTTCGTTTGAGCGAATTTATTATTTTTACAATGTTGCAACCACTTTGTTCTTAGTATTTTATTAGTTTAGCTTAACTTAGCTTACCGCCTAAGTTCGAGCGCAGGGCTGAATCATTTTGTTTGGCCC 97 30786937 0.989411513 27 87 860 0.919708029 1.401400541 0.328467153 0.288659794 0.496350365 97 7 4 126 3R:30786834-30787013 6 61.5 4540 FBgn0004606 2785.276667 51.94333333 79.77333333 0.022080392 1.183982545 0.770934314 2 2 2 0.01 dme-miR-932-5p 6mer3-8 GGAATT 3R 30787259 30787264 + 3R_30787259_30787264_+ 0.591720885 0.591720885 0.591720885 0 zfh1 FBtr0331180|FBtr0085701 30786658|30786202 30789202|30789202 3R + 30787211 30787292 3'utr zfh1 FlyBase G47228.1 AGTTTTCGGTTAAGCCAGGCTGGGTTGACATTGCACAACCGCTCGAAAGGAATTTTCCACCCACAACCTCCGGACCAACACA 54 30787279 0.920887867 9 49 202 0.953125 1.484299839 0.203125 0.148148148 0.28125 54 2 1 61 3R:30787211-30787292 6 zfh1 FBtr0331180|FBtr0085701 30786658|30786202 30789202|30789202 GGAATT 6mer3-8 dme-miR-932-5p 3R + 30787216 30787291 3'utr zfh1 FlyBase G35630.1 TCGGTTAAGCCAGGCTGGGTTGACATTGCACAACCGCTCGAAAGGAATTTTCCACCCACAACCTCCGGACCAACAC 37 30787279 0.914897995 7 35 124 0.918032787 1.271066772 0.081967213 0.459459459 0.672131148 37 3 2 56 3R:30787216-30787291 6 17.5 4541 FBgn0004606 2785.276667 51.94333333 79.77333333 0.006283038 0.336905602 0.219371553 -20 -20 -20 0.01 dme-miR-965-3p 7mer-m8 TACGCTT 3R 30787553 30787559 + 3R_30787553_30787559_+ 0.620204855 0.620204855 0.620204855 0 zfh1 FBtr0331180|FBtr0085701 30786658|30786202 30789202|30789202 3R + 30787527 30787647 3'utr zfh1 FlyBase G47231.1 AAGGAAAACCCCAGTCGTTCGCGAACTACGCTTTAAATTTAAACTTCTTCCCCACTAAGTCGCGAAATGAGCACAAAACACCTACAAGATCATTCCAATTTGGCCAGAGCCGCCGCGCCCC 79 30787559 0.982949211 14 76 360 0.969387755 1.977723605 0.040816327 0.164556962 0.326530612 79 3 0 95 3R:30787527-30787647 7 zfh1 FBtr0331180|FBtr0085701 30786658|30786202 30789202|30789202 TACGCTT 7mer-m8 dme-miR-965-3p 3R + 30787527 30787572 3'utr zfh1 FlyBase G35632.2 AAGGAAAACCCCAGTCGTTCGCGAACTACGCTTTAAATTTAAACTT 38 30787554 0.747952944 6 35 233 0.964912281 1.740362689 0.035087719 0.315789474 0.543859649 38 2 0 55 3R:30787527-30787572 7 35.5 4542 FBgn0004606 2785.276667 51.94333333 79.77333333 0.012745592 0.683437079 0.445010864 -6 -1 -3.5 0.01 dme-miR-980-5p 8mer-m1 GAAAAACT 3R 30787773 30787780 + 3R_30787773_30787780_+ 0.607906106 0.607906106 0.607906106 0 zfh1 FBtr0331180|FBtr0085701 30786658|30786202 30789202|30789202 3R + 30787760 30787806 3'utr zfh1 FlyBase G47233.1 CTAATATTTAAAAGAAAAACTTAATTTGGCCTTATTACAGATTATTT 26 30787785 0.761117344 4 26 241 1 1.462397998 0.034482759 0.115384615 0.206896552 26 0 0 29 3R:30787760-30787806 8 zfh1 FBtr0331180|FBtr0085701 30786658|30786202 30789202|30789202 GAAAAACT 8mer-m1 dme-miR-980-5p 3R + 30787767 30787809 3'utr zfh1 FlyBase G35633.1 TTAAAAGAAAAACTTAATTTGGCCTTATTACAGATTATTTAAC 19 30787785 0.968277172 4 17 171 0.935483871 1.462397998 0.064516129 0.473684211 0.677419355 19 2 0 29 3R:30787767-30787809 8 20.5 4543 FBgn0004606 2785.276667 51.94333333 79.77333333 0.007360131 0.394660848 0.256978105 -12 -12 -12 0.01 dme-miR-12-5p 6mer3-8 AATACT 3R 30788297 30788302 + 3R_30788297_30788302_+ 0.999969735 0.978324398 0.989147067 0.015305538 zfh1 FBtr0331180|FBtr0085701 30786658|30786202 30789202|30789202 3R + 30788263 30788373 3'utr zfh1 FlyBase G47237.1 CGAGAGGAAGAAAAACTCACAAAAAAATGCATTTAATACTTAATTAGTTTTTATATTCTTGTATTTTAACGAGGAGGAGGCCGATCGGCGGCGATATATATATATATATAT 61 30788295 0.985373517 15 50 420 0.847222222 1.484299839 0.125 0.163934426 0.291666667 61 10 1 61 3R:30788263-30788373 6 zfh1 FBtr0331180|FBtr0085701 30786658|30786202 30789202|30789202 AATACT 6mer3-8 dme-miR-12-5p 3R + 30788272 30788346 3'utr zfh1 FlyBase G35635.1 GAAAAACTCACAAAAAAATGCATTTAATACTTAATTAGTTTTTATATTCTTGTATTTTAACGAGGAGGAGGCCGA 20 30788293 0.985168379 9 17 134 0.954545455 1.322219295 0 0.157894737 0.272727273 19 1 0 21 3R:30788272-30788346 6 25.5 4544 FBgn0004606 2785.276667 51.94333333 79.77333333 0.009155284 0.490919592 0.319655691 2 4 3 0.01 dme-miR-283-5p 7mer-m1 GATATTT 3R 30788675 30788681 + 3R_30788675_30788681_+ 0.765586663 0.765586663 0.765586663 0 zfh1 FBtr0331180|FBtr0085701 30786658|30786202 30789202|30789202 3R + 30788583 30788700 3'utr zfh1 FlyBase G47240.1 AAAAAAAAAAACCCTTAACAACAACAAAATGTTAACTTAAACACTAAAAGAAGAACTTATTTTTAAGCGCAAATACTATGTGGTTTGTGATGGATATTTGCACTCTAGGGCCTTATAT 16 30788679 0.988876104 13 15 123 0.941176471 0.903089987 0.176470588 0.0625 0.117647059 16 0 1 16 3R:30788583-30788700 7 zfh1 FBtr0331180|FBtr0085701 30786658|30786202 30789202|30789202 GATATTT 7mer-m1 dme-miR-283-5p 3R + 30788648 30788712 3'utr zfh1 FlyBase G35638.1 AGCGCAAATACTATGTGGTTTGTGATGGATATTTGCACTCTAGGGCCTTATATGAAATACACACT 6 30788681 0.984989414 5 6 42 1 1.041392685 0.181818182 0.666666667 0.818181818 6 0 0 11 3R:30788648-30788712 7 7 4545 FBgn0004606 2785.276667 51.94333333 79.77333333 0.002513215 0.134762241 0.087748621 -4 -6 -5 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 3R 30790164 30790169 - 3R_30790164_30790169_- 1 1 1 0 wts FBtr0085720 30789623 30790974 3R - 30790118 30790192 3'utr wts FlyBase G55945.1 AAGAACAAACTTAGACGTAGCCTATGTGAAAAGCTAGCAATGTTAGACCAACTTGTTGAATGCCAAATGAAATTG 14 30790140 0.899057861 7 13 82 0.956521739 1.342422681 0.304347826 0.285714286 0.565217391 14 1 0 22 3R:30790118-30790192 6 wts FBtr0085720 30789623 30790974 ATGTGA 6mer3-8 dme-miR-1003-3p 3R - 30790117 30790192 3'utr wts FlyBase G42206.1 AAGAACAAACTTAGACGTAGCCTATGTGAAAAGCTAGCAATGTTAGACCAACTTGTTGAATGCCAAATGAAATTGT 14 30790168 0.919738153 7 14 63 1 1.301029996 0.2 0.357142857 0.55 14 0 0 20 3R:30790117-30790192 6 6 4546 FBgn0011739 1493.683333 31.27666667 48.31 0.004016916 0.1918363 0.124197889 -29 -1 -15 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 30826212 30826217 + 3R_30826212_30826217_+ 1 1 1 0 cindr FBtr0085706|FBtr0310068|FBtr0310072|FBtr0310070|FBtr0310071|FBtr0310424|FBtr0310069|FBtr0085705|FBtr0085704 30826044|30826044|30826044|30826044|30826044|30826044|30826044|30826044|30826044 30826550|30826559|30826550|30826550|30826550|30827005|30826550|30826550|30826559 3R + 30826128 30826239 3'utr cindr FlyBase G47268.1 AAGCGTAGAACGTAGTAGAGTAGAGACCGAACCCAAGACAATCCCAAATATCTGTACTCTGTGTTCTGTACTTATATACCAGAATGATCTATCCAAAACCACTAGCGATCAA 180 30826212 0.883386975 16 173 1111 0.965065502 2.043362278 0.056768559 0.244444444 0.406113537 180 7 1 221 3R:30826128-30826239 6 cindr FBtr0085704|FBtr0085705|FBtr0310069|FBtr0310424|FBtr0310071|FBtr0310070|FBtr0310072|FBtr0310068|FBtr0085706 30826044|30826044|30826044|30826044|30826044|30826044|30826044|30826044|30826044 30826559|30826550|30826550|30827005|30826550|30826550|30826550|30826559|30826550 TGATCT 6mer3-8 dme-bantam-3p 3R + 30826155 30826238 3'utr cindr FlyBase G35653.1 CGAACCCAAGACAATCCCAAATATCTGTACTCTGTGTTCTGTACTTATATACCAGAATGATCTATCCAAAACCACTAGCGATCA 105 30826212 0.968463506 11 102 603 0.967948718 2.178976947 0.038461538 0.352380952 0.564102564 105 5 0 151 3R:30826155-30826238 6 111.5 4547 FBgn0027598 4081.116667 128.2133333 195.6533333 0.027320954 0.869644343 0.569885512 0 0 0 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3R 30826358 30826364 + 3R_30826358_30826364_+ 0.521223855 0.521223855 0.521223855 0 cindr FBtr0085706|FBtr0310068|FBtr0310072|FBtr0310070|FBtr0310071|FBtr0310424|FBtr0310069|FBtr0085705|FBtr0085704 30826044|30826044|30826044|30826044|30826044|30826044|30826044|30826044|30826044 30826550|30826559|30826550|30826550|30826550|30827005|30826550|30826550|30826559 3R + 30826268 30826378 3'utr cindr FlyBase G47269.1 TTTTCGCTACAATACTTTGTATTCCCCTGTATATCTGATAATTTCGATAAGTATTTTTTATACACTCGTACATTCCGAAGAGCAAAAGGGTGTGATTTCTTTTAGCTGCTT 75 30826364 0.801500721 16 71 585 0.956521739 1.467361417 0.152173913 0.213333333 0.358695652 75 2 2 88 3R:30826268-30826378 7 cindr FBtr0085704|FBtr0085705|FBtr0310069|FBtr0310424|FBtr0310071|FBtr0310070|FBtr0310072|FBtr0310068|FBtr0085706 30826044|30826044|30826044|30826044|30826044|30826044|30826044|30826044|30826044 30826559|30826550|30826550|30827005|30826550|30826550|30826550|30826559|30826550 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 30826328 30826395 3'utr cindr FlyBase G35655.1 TACACTCGTACATTCCGAAGAGCAAAAGGGTGTGATTTCTTTTAGCTGCTTTCGATTGCGATTTGTTT 25 30826364 0.967044974 6 25 176 1 1.544068044 0.114285714 0.24 0.457142857 25 0 0 35 3R:30826328-30826395 7 31 4548 FBgn0027598 4081.116667 128.2133333 195.6533333 0.00759596 0.241784526 0.158443506 -6 -6 -6 0.01 dme-miR-283-5p 8mer-m1 TGATATTT 3R 31054978 31054985 - 3R_31054978_31054985_- 0.555593841 0.555593841 0.555593841 0 dco FBtr0334548 31054083 31056528 3R - 31054975 31055010 3'utr dco FlyBase G55989.1 AAAACTTAAATAAAAGTACATTACGTGATATTTCTT 9 31054990 0.983442932 4 9 74 1 1.079181246 0 0.333333333 0.5 9 0 0 12 3R:31054975-31055010 8 dco FBtr0334548 31054083 31056528 TGATATTT 8mer-m1 dme-miR-283-5p 3R - 31054972 31055003 3'utr dco FlyBase G42251.1 AAATAAAAGTACATTACGTGATATTTCTTACA 16 31054990 0.775267441 5 15 127 0.956521739 1.041392685 0.043478261 0.4375 0.608695652 16 0 1 22 3R:31054972-31055003 8 12.5 4549 FBgn0002413 1939.763333 65.62333333 100.4966667 0.006444085 0.190481028 0.124382235 5 5 5 0.01 dme-miR-277-3p 6mer3-8 TGCATT 3R 31055331 31055336 - 3R_31055331_31055336_- 1 1 1 0 dco FBtr0085743|FBtr0085742|FBtr0085744|FBtr0334548 31055184|31055184|31055184|31054083 31056528|31056528|31056528|31056528 3R - 31055321 31055371 3'utr dco FlyBase G55991.1 ATATAAATTGCGTTAGACATACACAACAAAACAATTGCATTAACGTTTCGA 7 31055337 0.863259506 4 7 39 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 3R:31055321-31055371 6 dco FBtr0085744|FBtr0334548|FBtr0085743|FBtr0085742 31055184|31054083|31055184|31055184 31056528|31056528|31056528|31056528 TGCATT 6mer3-8 dme-miR-277-3p 3R - 31055280 31055364 3'utr dco FlyBase G42252.1 TTGCGTTAGACATACACAACAAAACAATTGCATTAACGTTTCGATTTAACAATGTAAGTAATGGCCCTGCGGAGGAAAGTTACAC 10 31055336 0.945193932 7 10 48 1 1.146128036 0.214285714 0.3 0.5 10 0 0 14 3R:31055280-31055364 6 4 4550 FBgn0002413 1939.763333 65.62333333 100.4966667 0.002062107 0.060953929 0.039802315 1 0 0.5 0.01 dme-miR-317-3p 8mer-A1 TGTGTTCA 3R 31055508 31055515 - 3R_31055508_31055515_- 0.631136783 0.631136783 0.631136783 0 dco FBtr0085743|FBtr0085742|FBtr0085744|FBtr0334548 31055184|31055184|31055184|31054083 31056528|31056528|31056528|31056528 3R - 31055502 31055540 3'utr dco FlyBase G55992.1 CTTTCGTGGTCTGCACTTTGCTGCCTGTGTTCATATATA 6 31055524 0.981246061 4 4 44 0.875 0.84509804 0.125 0.166666667 0.375 6 1 0 7 3R:31055502-31055540 8 dco FBtr0085744|FBtr0334548|FBtr0085743|FBtr0085742 31055184|31054083|31055184|31055184 31056528|31056528|31056528|31056528 TGTGTTCA 8mer-A1 dme-miR-317-3p 3R - 31055505 31055541 3'utr dco FlyBase G42254.1 ACTTTCGTGGTCTGCACTTTGCTGCCTGTGTTCATAT 7 31055525 0.755162635 4 5 55 0.75 0.77815125 0 0.142857143 0.25 7 2 0 6 3R:31055505-31055541 8 3.5 4551 FBgn0002413 1939.763333 65.62333333 100.4966667 0.001804344 0.053334688 0.034827026 9 10 9.5 0.01 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 31055692 31055699 - 3R_31055692_31055699_- 0.625364009 0.625364009 0.625364009 0 dco FBtr0085743|FBtr0085742|FBtr0085744|FBtr0334548 31055184|31055184|31055184|31054083 31056528|31056528|31056528|31056528 3R - 31055624 31055748 3'utr dco FlyBase G55993.1 GTAACCTAAGTTGATGGTAAAATGATTGCGATTACCACGTGCAGTTCTCTAGCTTTAAGCAACGCTCTGACTTATAAGGCCCTCCTATGTTATATTATGTAACCTTCTGTACCGCCTACTCCCCT 59 31055709 0.90956727 18 53 479 0.910447761 1.30820858 0.313432836 0.101694915 0.208955224 59 4 2 61 3R:31055624-31055748 8 dco FBtr0085744|FBtr0334548|FBtr0085743|FBtr0085742 31055184|31054083|31055184|31055184 31056528|31056528|31056528|31056528 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R - 31055658 31055813 3'utr dco FlyBase G42255.1 AGGCTCTAGCTCTAGCGAATCCAATCCATACAAAAGCATATGCCACACAGCAAGGCACCCACATTGTAACCTAAGTTGATGGTAAAATGATTGCGATTACCACGTGCAGTTCTCTAGCTTTAAGCAACGCTCTGACTTATAAGGCCCTCCTATGTT 35 31055709 0.981664305 15 32 233 0.964285714 1.255272505 0.285714286 0.485714286 0.678571429 35 0 2 54 3R:31055658-31055813 8 32 4552 FBgn0002413 1939.763333 65.62333333 100.4966667 0.016496858 0.487631432 0.318418521 10 10 10 0.01 dme-miR-14-3p 6mer2-7 AGACTG 3R 31228017 31228022 + 3R_31228017_31228022_+ 1 1 1 0 CG12054 FBtr0085758 31227841 31228491 3R + 31227902 31228062 3'utr CG12054 FlyBase G47283.1 AAATTGACCAGCTTGTCCGTATACGAAAGACATTCTAGACTCGACAGAATGCCGATCTTCTTGGGGGCAGTCCAGCCCACTCACTCACCAAAACACACATTTGGAAACATTTCGTAGACTGCTTACTTGTTCTTAGTTTAGACTTCGAGTCCAATCAATTG 130 31228016 0.984629081 24 125 993 0.968944099 2.193124598 0.099378882 0.2 0.354037267 130 5 0 156 3R:31227902-31228062 6 CG12054 FBtr0085758 31227841 31228491 AGACTG 6mer2-7 dme-miR-14-3p 3R + 31227992 31228058 3'utr CG12054 FlyBase G35667.1 AAACACACATTTGGAAACATTTCGTAGACTGCTTACTTGTTCTTAGTTTAGACTTCGAGTCCAATCA 74 31228015 0.919267044 14 68 579 0.923076923 2.033423755 0.025641026 0.445945946 0.64957265 74 9 0 108 3R:31227992-31228058 6 81.5 4553 FBgn0039831 3333.656667 103.7033333 158.5733333 0.024447629 0.785895664 0.51395779 1 2 1.5 0.01 dme-bantam-3p 7mer-m8 TGATCTC 3R 31228214 31228220 + 3R_31228214_31228220_+ 0.661615243 0.661615243 0.661615243 0 CG12054 FBtr0085758 31227841 31228491 3R + 31228160 31228245 3'utr CG12054 FlyBase G47285.1 ATTCATCGATTGTATGTATGACTTTCATGCTTGTATTAAACTATTTACAACTGCTGATCTCCTCTTAATTTAATTAGGCTATGCAA 340 31228213 0.828338802 19 323 3019 0.955916473 1.836745966 0.011600928 0.217647059 0.382830626 340 14 5 412 3R:31228160-31228245 7 CG12054 FBtr0085758 31227841 31228491 TGATCTC 7mer-m8 dme-bantam-3p 3R + 31228156 31228245 3'utr CG12054 FlyBase G35668.1 ATTTATTCATCGATTGTATGTATGACTTTCATGCTTGTATTAAACTATTTACAACTGCTGATCTCCTCTTAATTTAATTAGGCTATGCAA 215 31228212 0.83012683 19 196 1897 0.912052117 1.84509804 0.016286645 0.339534884 0.537459283 215 24 3 280 3R:31228156-31228245 7 253.5 4554 FBgn0039831 3333.656667 103.7033333 158.5733333 0.076042624 2.444473016 1.598629446 1 2 1.5 0.01 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 31229157 31229163 + 3R_31229157_31229163_+ 0.823349562 0.823349561 0.823349561 0 CG12054 FBtr0335408|FBtr0113312|FBtr0335409 31229123|31229123|31229123 31231259|31229387|31229387 3R + 31229132 31229188 3'utr CG12054 FlyBase G47288.1 ATCGGATGAGAAGGCAAGAGAGTTGGCTGTGATGAAGTAGTAACTAACTGACTAACA 385 31229155 0.780017737 10 378 2042 0.977375566 1.857332496 0.332579186 0.124675325 0.237556561 385 5 5 432 3R:31229132-31229188 7 CG12054 FBtr0335409|FBtr0113312|FBtr0335408 31229123|31229123|31229123 31229387|31229387|31231259 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R + 31229127 31229245 3'utr CG12054 FlyBase G35673.1 GGCATATCGGATGAGAAGGCAAGAGAGTTGGCTGTGATGAAGTAGTAACTAACTGACTAACAAACCTGACAAGAGGCGGAGAAAGAGGATTCGTCAATAAGGCAGATGGGAAAAGGATG 345 31229155 0.837597036 10 336 1742 0.974854932 2.225309282 0.353965184 0.344927536 0.562862669 345 11 2 504 3R:31229127-31229245 7 358.5 4555 FBgn0039831 3333.656667 103.7033333 158.5733333 0.107539569 3.456976632 2.260783654 2 2 2 0.01 dme-miR-184-5p 6mer2-7 GATAAG 3R 31229274 31229279 + 3R_31229274_31229279_+ 1 1 1 0 CG12054 FBtr0335408|FBtr0113312|FBtr0335409 31229123|31229123|31229123 31231259|31229387|31229387 3R + 31229200 31229319 3'utr CG12054 FlyBase G47289.1 AGGCGGAGAAAGAGGATTCGTCAATAAGGCAGATGGGAAAAGGATGCAGAAGCTGCAGCAATTAATGAAGGAGGGATAAGTGAGGGAGTTGGGCGCCGCCCTACGGTCCTTAGAGAAGTT 32 31229276 0.953777241 9 25 113 0.777777778 1.146128036 0.361111111 0.09375 0.194444444 32 7 1 28 3R:31229200-31229319 6 CG12054 FBtr0335409|FBtr0113312|FBtr0335408 31229123|31229123|31229123 31229387|31229387|31231259 GATAAG 6mer2-7 dme-miR-184-5p 3R + 31229263 31229312 3'utr CG12054 FlyBase G35674.1 AATGAAGGAGGGATAAGTGAGGGAGTTGGGCGCCGCCCTACGGTCCTTAG 12 31229277 0.85984139 4 10 38 0.95 1.278753601 0.4 0.416666667 0.65 12 1 0 19 3R:31229263-31229312 6 10 4556 FBgn0039831 3333.656667 103.7033333 158.5733333 0.002999709 0.096428916 0.063062306 -2 -3 -2.5 0.01 dme-miR-277-3p 6mer2-7 GCATTT 3R 31229427 31229432 + 3R_31229427_31229432_+ 1 1 1 0 CG12054 FBtr0335408 31229123 31231259 3R + 31229406 31229442 3'utr CG12054 FlyBase G47291.1 AAAAACAGAAACAAATTCCAAGCATTTCGCAACTATT 17 31229421 0.946637195 2 17 73 1 1.361727836 0.130434783 0.294117647 0.47826087 17 0 0 23 3R:31229406-31229442 6 CG12054 FBtr0335408 31229123 31231259 GCATTT 6mer2-7 dme-miR-277-3p 3R + 31229408 31229437 3'utr CG12054 FlyBase G35675.1 AAACAGAAACAAATTCCAAGCATTTCGCAA 8 31229421 0.935390992 2 8 31 1 1.079181246 0.416666667 0.375 0.583333333 8 0 0 12 3R:31229408-31229437 6 12.5 4557 FBgn0039831 3333.656667 103.7033333 158.5733333 0.003749636 0.120536145 0.078827882 6 6 6 0.01 dme-miR-79-3p 7mer-A1 AGCTTTA 3R 31229533 31229539 + 3R_31229533_31229539_+ 0.823349562 0.823349562 0.823349562 0 CG12054 FBtr0335408 31229123 31231259 3R + 31229475 31229554 3'utr CG12054 FlyBase G47292.1 ATTAAACCTAATCTCAAACATATTTAAGCTGGCCTGCTTAGAAAAGCTTCTCTAAAACAGCTTTAGATAATTTTAAAATT 13 31229537 0.957037685 6 13 90 1 1.146128036 0.214285714 0.076923077 0.142857143 13 0 0 14 3R:31229475-31229554 7 CG12054 FBtr0335408 31229123 31231259 AGCTTTA 7mer-A1 dme-miR-79-3p 3R + 31229488 31229547 3'utr CG12054 FlyBase G35676.1 TCAAACATATTTAAGCTGGCCTGCTTAGAAAAGCTTCTCTAAAACAGCTTTAGATAATTT 10 31229537 0.807593151 5 8 74 0.75 0.954242509 0.333333333 0.2 0.333333333 10 3 0 9 3R:31229488-31229547 7 5.5 4558 FBgn0039831 3333.656667 103.7033333 158.5733333 0.00164984 0.053035904 0.034684268 -4 -4 -4 0.01 dme-miR-1006-3p 6mer2-7 GAATTT 3R 31229638 31229643 + 3R_31229638_31229643_+ 1 1 1 0 CG12054 FBtr0335408 31229123 31231259 3R + 31229608 31229678 3'utr CG12054 FlyBase G47293.1 AGCGACAACATTTTAGTAAATACATTTGGAGAATTTTCTTCAACTAGTCATTATTGTAGTTAAATTAAATT 91 31229633 0.770142959 16 89 930 0.980392157 2 0.078431373 0.10989011 0.205882353 91 2 0 100 3R:31229608-31229678 6 CG12054 FBtr0335408 31229123 31231259 GAATTT 6mer2-7 dme-miR-1006-3p 3R + 31229592 31229678 3'utr CG12054 FlyBase G35677.1 AAAAATTAATTATACAAGCGACAACATTTTAGTAAATACATTTGGAGAATTTTCTTCAACTAGTCATTATTGTAGTTAAATTAAATT 44 31229659 0.989950037 15 44 435 1 1.819543936 0.075757576 0.454545455 0.636363636 44 0 0 66 3R:31229592-31229678 6 56.5 4559 FBgn0039831 3333.656667 103.7033333 158.5733333 0.016948356 0.544823374 0.356302026 5 -21 -8 0.01 dme-miR-932-5p 6mer3-8 GGAATT 3R 31229728 31229733 + 3R_31229728_31229733_+ 0.788971796 1 0.894485898 0.149219471 CG12054 FBtr0335408 31229123 31231259 3R + 31229701 31229835 3'utr CG12054 FlyBase G47294.1 ACATAACTTTCTAACCTACTGGTTGGTGGAATTCCCGAACCCTATATTTATAACTTAAGAAACCTCTATCCTGTGTACAATTTCAATGAAATCTTAGTGAAGGGTCTTTCCCCAATCAGTTGTTTGCGTCATTTT 50 31229727 0.987434289 19 44 404 0.901639344 1.439332694 0.37704918 0.18 0.327868852 50 5 1 55 3R:31229701-31229835 6 CG12054 FBtr0335408 31229123 31231259 GGAATT 6mer3-8 dme-miR-932-5p 3R + 31229701 31229738 3'utr CG12054 FlyBase G35678.1 ACATAACTTTCTAACCTACTGGTTGGTGGAATTCCCGA 6 31229732 0.712946126 5 6 45 1 0.77815125 0.666666667 0 0 6 0 0 6 3R:31229701-31229738 6 7.5 4560 FBgn0039831 3333.656667 103.7033333 158.5733333 0.002249782 0.072321687 0.047296729 1 -4 -1.5 0.01 dme-miR-305-5p 7mer-m1 GTACAAT 3R 31229775 31229781 + 3R_31229775_31229781_+ 0.765586663 0.765586663 0.765586663 0 CG12054 FBtr0335408 31229123 31231259 3R + 31229701 31229835 3'utr CG12054 FlyBase G47294.1 ACATAACTTTCTAACCTACTGGTTGGTGGAATTCCCGAACCCTATATTTATAACTTAAGAAACCTCTATCCTGTGTACAATTTCAATGAAATCTTAGTGAAGGGTCTTTCCCCAATCAGTTGTTTGCGTCATTTT 50 31229795 0.987434289 19 44 404 0.901639344 1.439332694 0.37704918 0.18 0.327868852 50 5 1 55 3R:31229701-31229835 7 CG12054 FBtr0335408 31229123 31231259 GTACAAT 7mer-m1 dme-miR-305-5p 3R + 31229759 31229822 3'utr CG12054 FlyBase G35679.1 GAAACCTCTATCCTGTGTACAATTTCAATGAAATCTTAGTGAAGGGTCTTTCCCCAATCAGTTG 22 31229794 0.668951611 8 19 170 0.838709677 1.414973348 0.483870968 0.318181818 0.516129032 22 5 0 26 3R:31229759-31229822 7 19.5 4561 FBgn0039831 3333.656667 103.7033333 158.5733333 0.005849433 0.188036386 0.122971496 -20 -19 -19.5 0.01 dme-miR-1008-3p 7mer-m8 AGCTGTG 3R 31230131 31230137 + 3R_31230131_31230137_+ 0.671790755 0.651276233 0.661533494 0.014506013 CG12054 FBtr0335408 31229123 31231259 3R + 31230108 31230153 3'utr CG12054 FlyBase G47298.1 TATAGAGCAGAGCATGCATCTGTAGCTGTGTGAGTGTTTGTCCGTG 45 31230138 0.663285063 7 43 337 0.964285714 1.431363764 0.482142857 0.2 0.357142857 45 1 1 54 3R:31230108-31230153 7 CG12054 FBtr0335408 31229123 31231259 AGCTGTG 7mer-m8 dme-miR-1008-3p 3R + 31230110 31230153 3'utr CG12054 FlyBase G35681.1 TAGAGCAGAGCATGCATCTGTAGCTGTGTGAGTGTTTGTCCGTG 31 31230138 0.742704348 7 31 209 1 1.662757832 0.608695652 0.322580645 0.543478261 31 0 0 46 3R:31230110-31230153 7 38 4562 FBgn0039831 3333.656667 103.7033333 158.5733333 0.011398894 0.36642988 0.239636761 -7 -7 -7 0.01 dme-miR-317-3p 6mer2-7 GTGTTC 3R 31230179 31230184 + 3R_31230179_31230184_+ 1 1 1 0 CG12054 FBtr0335408 31229123 31231259 3R + 31230167 31230208 3'utr CG12054 FlyBase G47299.1 TGTTTATTTATAGTGTTCGAACGTCCCCTAAGTGTAAAGTCC 8 31230195 0.981851445 4 7 52 0.888888889 0.903089987 0.333333333 0.125 0.222222222 8 1 0 8 3R:31230167-31230208 6 CG12054 FBtr0335408 31229123 31231259 GTGTTC 6mer2-7 dme-miR-317-3p 3R + 31230167 31230200 3'utr CG12054 FlyBase G35682.1 TGTTTATTTATAGTGTTCGAACGTCCCCTAAGTG 5 31230195 0.93796615 2 4 50 0.9 0.653212514 0.8 0.6 0.8 5 0 1 9 3R:31230167-31230200 6 5.5 4563 FBgn0039831 3333.656667 103.7033333 158.5733333 0.00164984 0.053035904 0.034684268 -16 -16 -16 0.01 dme-miR-14-3p 7mer-m8 AAGACTG 3R 31230801 31230807 + 3R_31230801_31230807_+ 0.671795832 0.671795832 0.671795832 0 CG12054 FBtr0335408 31229123 31231259 3R + 31230775 31230831 3'utr CG12054 FlyBase G47303.1 AATAAAATGAGTATGTCATCTTATATAAGACTGCTGTTATGTTCGTAAATATATTTA 90 31230799 0.703281641 9 84 844 0.904761905 1.977723605 0.142857143 0.144444444 0.266666667 90 10 0 95 3R:31230775-31230831 7 CG12054 FBtr0335408 31229123 31231259 AAGACTG 7mer-m8 dme-miR-14-3p 3R + 31230777 31230830 3'utr CG12054 FlyBase G35684.1 TAAAATGAGTATGTCATCTTATATAAGACTGCTGTTATGTTCGTAAATATATTT 75 31230799 0.701161977 9 61 664 0.836538462 1.939519253 0.115384615 0.293333333 0.490384615 75 17 0 87 3R:31230777-31230830 7 80 4564 FBgn0039831 3333.656667 103.7033333 158.5733333 0.023997672 0.771431327 0.504498444 2 2 2 0.01 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3R 31256475 31256480 + 3R_31256475_31256480_+ 0.967313612 0.967020972 0.967167292 0.000206899 spn-F FBtr0085760 31256404 31256659 3R + 31256423 31256519 stop_codon spn-F FlyBase G47315.1 TTTCGCCACCGAACTCTGACCTGACCGGAGAAATCCAAGGATTAAGGAGCAGTTTGACTGCGCAGGAGCCGCTTGTTACGTTTCTATTGATAAGACG 41 31256476 0.826600605 10 36 165 0.928571429 1.591064607 0.214285714 0.024390244 0.047619048 41 3 0 39 3R:31256423-31256519 6 spn-F FBtr0085760|FBtr0330079 31256404|31256440 31256659|31256659 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3R + 31256466 31256557 3'utr spn-F FlyBase G35690.1 AAGGAGCAGTTTGACTGCGCAGGAGCCGCTTGTTACGTTTCTATTGATAAGACGTTAGGGCGATCATGTATCAAAACTATACAACATTGAAC 17 31256475 0.971174007 7 16 94 0.962962963 1.414973348 0.259259259 0.294117647 0.555555556 17 1 0 26 3R:31256466-31256557 6 15 4565 FBgn0086362 186.31 15.49 23.55333333 0.080510976 0.968366688 0.636852533 -1 0 -0.5 0.01 dme-miR-1002-5p 8mer-A1 CTACTTAA 3R 31401470 31401477 + 3R_31401470_31401477_+ 0.624577551 0.62462678 0.624602165 3.48E-05 Gcn2 FBtr0334552|FBtr0085787|FBtr0334551 31401376|31401376|31401376 31401560|31402013|31401560 3R + 31401416 31401501 3'utr Gcn2 FlyBase G47330.1 AGACCAGCCAGTAGTGTAAGCTCGAAAGTGTCACAAATTATTTTCGCCGAAATTCTACTTAACTGGCTGCCCTCCGTGCCATTAAC 11 31401487 0.945997837 8 11 66 1 1.113943352 0.076923077 0.090909091 0.230769231 11 0 0 13 3R:31401416-31401501 8 Gcn2 FBtr0334552|FBtr0085787|FBtr0334551 31401376|31401376|31401376 31401560|31402013|31401560 CTACTTAA 8mer-A1 dme-miR-1002-5p 3R + 31401458 31401496 3'utr Gcn2 FlyBase G35701.1 TTCGCCGAAATTCTACTTAACTGGCTGCCCTCCGTGCCA 8 31401468 0.953398027 5 6 50 0.642857143 0.954242509 0.285714286 0.625 0.785714286 8 5 0 9 3R:31401458-31401496 8 7 4566 FBgn0019990 1106.633333 23.54666667 35.94666667 0.006325492 0.297281993 0.194732938 -17 2 -7.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 31401608 31401613 + 3R_31401608_31401613_+ 1 1 1 0 Gcn2 FBtr0085787 31401376 31402013 3R + 31401594 31401629 3'utr Gcn2 FlyBase G47331.1 TTATTGAATGCCTTTCTAGTGGAAGCTCTCATTCAT 18 31401607 0.614506343 5 16 143 0.904761905 1.278753601 0.19047619 0.111111111 0.238095238 18 2 0 19 3R:31401594-31401629 6 Gcn2 FBtr0085787 31401376 31402013 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 31401596 31401626 3'utr Gcn2 FlyBase G35702.1 ATTGAATGCCTTTCTAGTGGAAGCTCTCATT 7 31401607 0.662043147 2 7 52 1 1.079181246 0.25 0.571428571 0.75 7 0 0 12 3R:31401596-31401626 6 12.5 4567 FBgn0019990 1106.633333 23.54666667 35.94666667 0.011295521 0.530860702 0.347737389 1 1 1 0.01 dme-miR-282-5p 8mer-A1 AGAGGCTA 3R 31401801 31401808 + 3R_31401801_31401808_+ 0.63790686 0.63790686 0.63790686 0 Gcn2 FBtr0085787 31401376 31402013 3R + 31401783 31401829 3'utr Gcn2 FlyBase G47332.1 TCGAAATTAAAGTTAAGTAGAGGCTAATATTTTCAGAGAAAATTCTT 48 31401800 0.893086411 7 46 326 0.949152542 1.271066772 0.084745763 0.229166667 0.372881356 48 1 2 56 3R:31401783-31401829 8 Gcn2 FBtr0085787 31401376 31402013 AGAGGCTA 8mer-A1 dme-miR-282-5p 3R + 31401783 31401821 3'utr Gcn2 FlyBase G35704.1 TCGAAATTAAAGTTAAGTAGAGGCTAATATTTTCAGAGA 35 31401800 0.870531403 5 34 228 0.979166667 1.672097858 0 0.285714286 0.479166667 35 1 0 47 3R:31401783-31401821 8 41.5 4568 FBgn0019990 1106.633333 23.54666667 35.94666667 0.03750113 1.762457531 1.154488131 1 1 1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 31456999 31457004 + 3R_31456999_31457004_+ 1 1 1 0 Gprk2 FBtr0085788|FBtr0085788|FBtr0085788 31456465|31456465|31456465 31457873|31457873|31457873 3R + 31456983 31457098 3'utr Gprk2 FlyBase G47360.1 TTTTTGTATAGTAGTTTGTGATCGACGGGACAGCGTTGGACGATAGATGTTCTAGTTAGCATTTGTAAGTTAAGAAAATGACATGAATACTCGAAAACTTGAATGCATTTTTAACA 66 31456998 0.719675097 21 59 480 0.898734177 1.851258349 0.341772152 0.181818182 0.316455696 66 8 0 71 3R:31456983-31457098 6 Gprk2 FBtr0085788|FBtr0085788|FBtr0085788 31456465|31456465|31456465 31457873|31457873|31457873 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 31456950 31457059 3'utr Gprk2 FlyBase G35733.1 ACAGCACTACGTAGACGGCTGAGTAATATGTAATTTTTGTATAGTAGTTTGTGATCGACGGGACAGCGTTGGACGATAGATGTTCTAGTTAGCATTTGTAAGTTAAGAAA 52 31456998 0.98585672 11 45 372 0.879518072 1.562292864 0.481927711 0.5 0.686746988 52 9 1 73 3R:31456950-31457059 6 35 4569 FBgn0261988 1488.626667 40.02 61.47666667 0.023511604 0.874562719 0.569321694 1 1 1 0.01 dme-miR-304-5p 6mer3-8 TGAGAT 3R 31457375 31457380 + 3R_31457375_31457380_+ 1 1 1 0 Gprk2 FBtr0085788 31456465 31457873 3R + 31457354 31457427 3'utr Gprk2 FlyBase G47363.1 TGCTAACTAATGCAAATTCATTGAGATATCGATGTCAGCTAGCGTCTAAGTTTTGTGTAATAGTAGCGTAGGCA 17 31457404 0.989192782 10 16 144 0.947368421 1.255272505 0.052631579 0.117647059 0.210526316 17 1 0 18 3R:31457354-31457427 6 Gprk2 FBtr0085788 31456465 31457873 TGAGAT 6mer3-8 dme-miR-304-5p 3R + 31457339 31457426 3'utr Gprk2 FlyBase G35737.1 CAGCAGCAGCAGTTATGCTAACTAATGCAAATTCATTGAGATATCGATGTCAGCTAGCGTCTAAGTTTTGTGTAATAGTAGCGTAGGC 14 31457382 0.982066191 10 13 97 1 1.342422681 0.181818182 0.5 0.681818182 14 0 0 22 3R:31457339-31457426 6 6.5 4570 FBgn0261988 1488.626667 40.02 61.47666667 0.004366441 0.162418791 0.105731172 -29 -7 -18 0.01 dme-miR-1006-3p 7mer-A1 GAATTTA 3R 31457481 31457487 + 3R_31457481_31457487_+ 0.823349562 0.823349562 0.823349562 0 Gprk2 FBtr0085788 31456465 31457873 3R + 31457453 31457512 3'utr Gprk2 FlyBase G47364.1 AGAAAGAAACAAAAGTAAACCAATTGGAGAATTTATTATGTTAGTATGAAAATTAATTAT 10 31457476 0.989455083 6 10 92 1 1.041392685 0.363636364 0.1 0.181818182 10 0 0 11 3R:31457453-31457512 7 Gprk2 FBtr0085788 31456465 31457873 GAATTTA 7mer-A1 dme-miR-1006-3p 3R + 31457452 31457500 3'utr Gprk2 FlyBase G35738.1 AAGAAAGAAACAAAAGTAAACCAATTGGAGAATTTATTATGTTAGTATG 7 31457484 0.98631948 4 6 47 0.909090909 1 0.363636364 0.285714286 0.545454545 7 1 0 10 3R:31457452-31457500 7 7.5 4571 FBgn0261988 1488.626667 40.02 61.47666667 0.005038201 0.187406297 0.121997506 5 -3 1 0.01 dme-miR-1003-3p 8mer-A1 ATGTGAGA 3R 31575989 31575996 - 3R_31575989_31575996_- 0.643565845 0.643565845 0.643565845 0 pygo FBtr0085806 31575833 31576891 3R - 31575922 31576012 3'utr pygo FlyBase G56037.1 AAGAAATTATGAATTCATGTGAGAAAGGTTAATTTGTAATTTAAGACGAATGTGGAGGACGCAGCGAACATAAACGATTCAAACGAGAAAA 25 31575999 0.951748212 6 22 141 0.888888889 1.380211242 0.37037037 0.08 0.148148148 25 3 0 24 3R:31575922-31576012 8 pygo FBtr0085806 31575833 31576891 ATGTGAGA 8mer-A1 dme-miR-1003-3p 3R - 31575942 31576012 3'utr pygo FlyBase G42287.1 AAGAAATTATGAATTCATGTGAGAAAGGTTAATTTGTAATTTAAGACGAATGTGGAGGACGCAGCGAACAT 13 31575999 0.973276884 3 13 84 1 1.278753601 0.263157895 0.384615385 0.578947368 13 0 0 19 3R:31575942-31576012 8 14.5 4572 FBgn0043900 862.0266667 23.10666667 35.35666667 0.016820825 0.627524524 0.410106533 3 3 3 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3R 31576195 31576200 - 3R_31576195_31576200_- 1 1 1 0 pygo FBtr0085806 31575833 31576891 3R - 31576192 31576286 3'utr pygo FlyBase G56039.1 ATGACATATTCAACACATTTGGAGATGAGTATAGGAGTTGTAACGAAATGAAATTATCATTGTGAAATTGCTGCGAACTGCATGAGTGTGTTATT 18 31576227 0.800812834 7 18 134 1 1.342422681 0.090909091 0.222222222 0.363636364 18 0 0 22 3R:31576192-31576286 6 pygo FBtr0085806 31575833 31576891 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 31576185 31576237 3'utr pygo FlyBase G42288.1 GAAATTATCATTGTGAAATTGCTGCGAACTGCATGAGTGTGTTATTTGTTATT 7 31576218 0.981073147 4 6 53 1 0.954242509 0.222222222 0.285714286 0.444444444 7 0 0 9 3R:31576185-31576237 6 2.5 4573 FBgn0043900 862.0266667 23.10666667 35.35666667 0.002900142 0.108193883 0.070708023 27 18 22.5 0.01 dme-miR-980-3p 8mer-A1 GGCAGCTA 3R 31576686 31576693 - 3R_31576686_31576693_- 0.668734347 0.668734347 0.668734347 0 pygo FBtr0085806 31575833 31576891 3R - 31576661 31576713 3'utr pygo FlyBase G56043.1 GACCCACCAGTCCCCATCCCGGCAGCTAAGCCCCGTAGCCAGAATGCGAACCA 16 31576698 0.835690792 5 16 35 1 1.230448921 0.058823529 0.0625 0.117647059 16 0 0 17 3R:31576661-31576713 8 pygo FBtr0085806 31575833 31576891 GGCAGCTA 8mer-A1 dme-miR-980-3p 3R - 31576672 31576709 3'utr pygo FlyBase G42290.1 CACCAGTCCCCATCCCGGCAGCTAAGCCCCGTAGCCAG 7 31576698 0.733471962 2 5 19 0.666666667 0.77815125 0 0.285714286 0.444444444 7 3 0 6 3R:31576672-31576709 8 11.5 4574 FBgn0043900 862.0266667 23.10666667 35.35666667 0.013340655 0.497691864 0.325256906 5 5 5 0.01 dme-miR-1007-3p 8mer-A1 TGAGCTTA 3R 31596910 31596917 - 3R_31596910_31596917_- 0.625363359 0.625363359 0.625363359 0 CycG FBtr0333328 31596640 31599272 3R - 31596869 31597076 3'utr CycG FlyBase G56057.2 ATTTTACATTGTATTTAGCGCGGAGTTAGTTAAATATTTGCAAGTATCAACATCAAAAACATGAATGAAAATCTCAATTATTGTATATTTAGTTTTTATTTGACGACTACTTTTATTCATGATAACAATGATGGTGGGCAATTGCCCATCGTCAAGTTTTGAGCTTATATTCGGTTGAGGTTTACACTTTAGGATTAGTTACCACACG 224 31596917 0.867040235 34 214 2256 0.957198444 2.390935107 0.089494163 0.133928571 0.245136187 224 11 0 246 3R:31596869-31597076 8 CycG FBtr0333328 31596640 31599272 TGAGCTTA 8mer-A1 dme-miR-1007-3p 3R - 31596874 31597077 3'utr CycG FlyBase G42303.1 AATTTTACATTGTATTTAGCGCGGAGTTAGTTAAATATTTGCAAGTATCAACATCAAAAACATGAATGAAAATCTCAATTATTGTATATTTAGTTTTTATTTGACGACTACTTTTATTCATGATAACAATGATGGTGGGCAATTGCCCATCGTCAAGTTTTGAGCTTATATTCGGTTGAGGTTTACACTTTAGGATTAGTTACC 133 31596917 0.779429794 29 131 1301 0.974619289 2.283301229 0.121827411 0.368421053 0.573604061 133 5 0 192 3R:31596874-31597077 8 111 4575 FBgn0039858 20619.65667 595.7166667 909.0766667 0.005383213 0.186330191 0.122101913 0 0 0 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 31597223 31597229 - 3R_31597223_31597229_- 0.661615645 0.661615645 0.661615645 0 CycG FBtr0333328 31596640 31599272 3R - 31597130 31597277 3'utr CycG FlyBase G56058.1 AGTCGAAATGCGAAACAAATAATTATATTTAAGCGACGGAGATCATCATGTGTTCGTTTAAGCTTAGTCCACTATAAATAACAGCCAATTGACGATTAGGCGATTAAGAGAAAGGTGAAAGCGGTGAAAATATGTCTAGCACTAAGTT 195 31597229 0.987348193 21 182 1601 0.944700461 1.533602611 0.235023041 0.112820513 0.202764977 195 7 5 205 3R:31597130-31597277 7 CycG FBtr0333328 31596640 31599272 TGTGTTC 7mer-m8 dme-miR-317-3p 3R - 31597127 31597351 3'utr CycG FlyBase G42304.1 CTGAACCACAGCCTGAAGATCAGTTCTGTGAAAGCTGTGAGTGAGAAAGCAGAATCCGAATACATTGTTAACACAGTCGAAATGCGAAACAAATAATTATATTTAAGCGACGGAGATCATCATGTGTTCGTTTAAGCTTAGTCCACTATAAATAACAGCCAATTGACGATTAGGCGATTAAGAGAAAGGTGAAAGCGGTGAAAATATGTCTAGCACTAAGTTTTT 154 31597229 0.975900291 31 143 1078 0.931914894 1.437354128 0.170212766 0.402597403 0.608510638 154 9 7 219 3R:31597127-31597351 7 121 4576 FBgn0039858 20619.65667 595.7166667 909.0766667 0.005868187 0.203116694 0.133102085 0 0 0 0.01 dme-miR-980-3p 6mer3-8 GGCAGC 3R 31597661 31597666 - 3R_31597661_31597666_- 1 1 1 0 CycG FBtr0333328 31596640 31599272 3R - 31597639 31597692 3'utr CycG FlyBase G56061.1 CAGAAAACTTTTATTTAAATCCACTTGGCAGCGGAATGTGCAAACTCCTGTCTG 102 31597667 0.834565582 5 97 515 0.976190476 2.089905111 0.03968254 0.176470588 0.333333333 102 3 0 123 3R:31597639-31597692 6 CycG FBtr0333328 31596640 31599272 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 31597599 31597688 3'utr CycG FlyBase G42306.1 AAACTTTTATTTAAATCCACTTGGCAGCGGAATGTGCAAACTCCTGTCTGTAAATTTGAATAAAATGCGTTTGCCCCGCCAAAGGGGCAT 90 31597667 0.949070601 6 88 402 0.993055556 1.854306042 0.020833333 0.444444444 0.652777778 90 0 1 143 3R:31597599-31597688 6 90.5 4577 FBgn0039858 20619.65667 595.7166667 909.0766667 0.004389016 0.151917858 0.09955156 1 1 1 0.01 dme-miR-1012-3p 8mer-A1 TTGACTAA 3R 31598272 31598279 - 3R_31598272_31598279_- 0.626829049 0.627007303 0.626918176 0.000126077 CycG FBtr0333328 31596640 31599272 3R - 31598186 31598309 3'utr CycG FlyBase G56063.1 AGAAAACTAAAGTATAATTCGCCGCCTGTATTGACTAAGAACTCTTAACAATAATATAATAACTTTAAACAAGGTACAATATGTAGTGTGTGTCTAGTAGATTTTTCTCTGTATAACAAAATCA 40 31598282 0.980977245 13 37 274 0.942307692 1.69019608 0.057692308 0.25 0.423076923 40 3 0 49 3R:31598186-31598309 8 CycG FBtr0333328 31596640 31599272 TTGACTAA 8mer-A1 dme-miR-1012-3p 3R - 31598253 31598323 3'utr CycG FlyBase G42309.1 ACGAGAAAGCCCATAGAAAACTAAAGTATAATTCGCCGCCTGTATTGACTAAGAACTCTTAACAATAATAT 35 31598282 0.999737317 10 32 186 0.941176471 1.681241237 0.098039216 0.382352941 0.588235294 34 3 0 48 3R:31598253-31598323 8 21.5 4578 FBgn0039858 20619.65667 595.7166667 909.0766667 0.001042694 0.036090983 0.023650371 3 3 3 0.01 dme-miR-304-5p 6mer3-8 TGAGAT 3R 31598933 31598938 - 3R_31598933_31598938_- 1 1 1 0 CycG FBtr0085800|FBtr0085802|FBtr0085799|FBtr0085803|FBtr0333328 31598801|31598801|31598801|31598801|31596640 31599272|31599272|31599272|31599272|31599272 3R - 31598896 31598980 3'utr CycG FlyBase G56068.1 GTGTATTTGGTAGCGCGCTGGTTCTAACATTTAAGAAACTATTGAGATACGGAAATGTGGGCGCCAAGGTGACGCAGCCACGCCC 45 31598939 0.962937978 7 40 205 0.892857143 0.920818754 0.089285714 0.222222222 0.375 45 1 5 50 3R:31598896-31598980 6 CycG FBtr0333328|FBtr0085800|FBtr0085802|FBtr0085799|FBtr0085803 31596640|31598801|31598801|31598801|31598801 31599272|31599272|31599272|31599272|31599272 TGAGAT 6mer3-8 dme-miR-304-5p 3R - 31598903 31598983 3'utr CycG FlyBase G42312.1 AATGTGTATTTGGTAGCGCGCTGGTTCTAACATTTAAGAAACTATTGAGATACGGAAATGTGGGCGCCAAGGTGACGCAGC 33 31598939 0.956035112 8 33 156 1 1.612783857 0.097560976 0.181818182 0.341463415 33 0 0 41 3R:31598903-31598983 6 33.5 4579 FBgn0039858 20619.65667 595.7166667 909.0766667 0.001624663 0.056234787 0.036850577 1 1 1 0.01 dme-miR-980-3p 8mer-A1 GGCAGCTA 3R 31614950 31614957 + 3R_31614950_31614957_+ 0.668734347 0.668734347 0.668734347 0 Med FBtr0085815|FBtr0085816|FBtr0337030 31614900|31614900|31614900 31615200|31615200|31615375 3R + 31614865 31614990 stop_codon Med FlyBase G47426.1 CGCCATGCCGATCGATGGCCCGCGTGCCGCCGCCTAATCCGTATTTATTATTGGCCCACATCTATGCTAAGGACTCAGTTTTAGCGGCAGCTATCCGTCAGCTATTTGCGGATTTTGTGTTTTTCA 52 31614945 0.986976867 22 47 404 0.901639344 1.263241435 0.31147541 0.173076923 0.295081967 52 4 2 55 3R:31614865-31614990 8 Med FBtr0337030|FBtr0085815|FBtr0085816 31614900|31614900|31614900 31615375|31615200|31615200 GGCAGCTA 8mer-A1 dme-miR-980-3p 3R + 31614887 31614980 stop_codon Med FlyBase G35778.1 CGTGCCGCCGCCTAATCCGTATTTATTATTGGCCCACATCTATGCTAAGGACTCAGTTTTAGCGGCAGCTATCCGTCAGCTATTTGCGGATTTT 47 31614944 0.987822594 14 37 321 0.863013699 1.322219295 0.260273973 0.425531915 0.630136986 47 8 2 63 3R:31614887-31614980 8 36 4580 FBgn0011655 590.06 20.83333333 31.85 0.061010745 1.728 1.130298273 5 6 5.5 0.01 dme-miR-980-3p 6mer2-7 GCAGCT 3R 31615080 31615085 + 3R_31615080_31615085_+ 0.991786631 0.599671091 0.795728861 0.277267529 Med FBtr0085815|FBtr0085816|FBtr0337030 31614900|31614900|31614900 31615200|31615200|31615375 3R + 31615047 31615100 3'utr Med FlyBase G47428.1 AAAAAATTGAAACAACTTAGAAGTCTTAAGTATGCAGCTGTAAAGCACTAAGCA 14 31615079 0.976095096 6 12 72 0.8125 0.812913357 0.1875 0.142857143 0.25 14 2 1 13 3R:31615047-31615100 6 Med FBtr0337030|FBtr0085815|FBtr0085816 31614900|31614900|31614900 31615375|31615200|31615200 GCAGCT 6mer2-7 dme-miR-980-3p 3R + 31615060 31615100 3'utr Med FlyBase G35779.1 AACTTAGAAGTCTTAAGTATGCAGCTGTAAAGCACTAAGCA 10 31615079 0.770884507 3 8 63 0.8125 1.113943352 0 0.5 0.6875 10 3 0 13 3R:31615060-31615100 6 10 4581 FBgn0011655 590.06 20.83333333 31.85 0.016947429 0.48 0.313971743 1 1 1 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 31621154 31621159 + 3R_31621154_31621159_+ 1 1 1 0 pasha FBtr0085820|FBtr0337031|FBtr0337032 31621116|31621116|31621116 31621474|31621474|31622217 3R + 31621127 31621166 3'utr pasha FlyBase G47436.1 ACACATCTCTCTCGCCAACATTGATTCTCTAGTAGTGCAT 25 31621148 0.834000715 4 25 222 1 1.431363764 0.333333333 0.08 0.148148148 25 0 0 27 3R:31621127-31621166 6 pasha FBtr0337032|FBtr0337031|FBtr0085820 31621116|31621116|31621116 31622217|31621474|31621474 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 31621127 31621165 3'utr pasha FlyBase G35785.1 ACACATCTCTCTCGCCAACATTGATTCTCTAGTAGTGCA 23 31621148 0.787425111 5 22 176 0.939393939 1.491361694 0.636363636 0.347826087 0.545454545 23 2 0 31 3R:31621127-31621165 6 24 4582 FBgn0039861 490.91 22.87333333 35.41333333 0.048888798 1.049256776 0.677710843 6 6 6 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 31662121 31662126 + 3R_31662121_31662126_+ 1 1 1 0 kek6 FBtr0330107|FBtr0085821 31661629|31661608 31664646|31664646 3R + 31662103 31662140 3'utr kek6 FlyBase G47438.1 AGGTATAGCGACCAAAACTGATCTTCATAAGGTGTATA 10 31662121 0.908221345 2 10 50 1 1.041392685 0.454545455 0.1 0.181818182 10 0 0 11 3R:31662103-31662140 6 kek6 FBtr0330107|FBtr0085821 31661629|31661608 31664646|31664646 TGATCT 6mer3-8 dme-bantam-3p 3R + 31662101 31662142 3'utr kek6 FlyBase G35786.1 TAAGGTATAGCGACCAAAACTGATCTTCATAAGGTGTATAGT 8 31662121 0.90908133 3 8 50 1 1 0.2 0.25 0.4 8 0 0 10 3R:31662101-31662142 6 9 4583 FBgn0039862 176.9033333 3.166666667 4.81 0.050875243 2.842105263 1.871101871 0 0 0 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3R 31676484 31676489 + 3R_31676484_31676489_+ 1 1 1 0 CG1815 FBtr0085823 31675699 31677971 3R + 31676467 31676535 3'utr CG1815 FlyBase G47456.2 TGATTTCCGAAATGCGAAAGACTTTGGAGCAAGAGCACAAACGCGTGATCTCCGAACTGCGACAGCAGA 84 31676491 0.984684087 5 83 249 0.990825688 2.033423755 0.220183486 0.214285714 0.394495413 84 1 0 108 3R:31676467-31676535 6 CG1815 FBtr0085823 31675699 31677971 AAGACT 6mer3-8 dme-miR-14-3p 3R + 31676470 31676563 3'utr CG1815 FlyBase G35797.2 TTTCCGAAATGCGAAAGACTTTGGAGCAAGAGCACAAACGCGTGATCTCCGAACTGCGACAGCAGAACGCCATCGAGCTGATGCGGGCGGTCGA 59 31676491 0.946946113 6 58 176 1 1.892094603 0.397435897 0.271186441 0.448717949 59 0 0 78 3R:31676470-31676563 6 55 4584 FBgn0039863 1117.306667 23.11666667 35.54333333 0.049225519 2.379235761 1.547406921 -7 -7 -7 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 31676639 31676644 + 3R_31676639_31676644_+ 0.999947396 0.998960417 0.999453907 0.000697914 CG1815 FBtr0085823|FBtr0085823|FBtr0085823 31675699|31675699|31675699 31677971|31677971|31677971 3R + 31676589 31676675 3'utr CG1815 FlyBase G47457.1 GCGAATTGCATGCGTGAGGCGCAGTTGTACTGCTGTTGGAACACATCCTACTGTGACTATCCCTGCCAGCAGCTTCACTGGCCTGGA 14 31676637 0.967580579 8 13 74 1 1.204119983 0.1875 0.142857143 0.25 14 0 0 16 3R:31676589-31676675 6 CG1815 FBtr0085823|FBtr0085823|FBtr0085823 31675699|31675699|31675699 31677971|31677971|31677971 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 31676594 31676658 3'utr CG1815 FlyBase G35798.1 TTGCATGCGTGAGGCGCAGTTGTACTGCTGTTGGAACACATCCTACTGTGACTATCCCTGCCAGC 5 31676646 0.981573819 3 4 39 0.857142857 0.77815125 0.428571429 0.4 0.571428571 5 1 0 6 3R:31676594-31676658 6 4.5 4585 FBgn0039863 1117.306667 23.11666667 35.54333333 0.004027542 0.194664744 0.126606021 2 -7 -2.5 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3R 31677796 31677801 + 3R_31677796_31677801_+ 1 1 1 0 CG1815 FBtr0085823|FBtr0085824 31675699|31677452 31677971|31677971 3R + 31677779 31677871 3'utr CG1815 FlyBase G47462.2 TTAACCGCGTAGTAAGTAAGACTCATTGTGAAGCCATCAGATGGACTTGGCCTAATCATAGCAACTAGTAGTCTGTAAGGGCATCTCAATTTC 204 31677804 0.844985526 12 195 1144 0.967078189 1.672097858 0.119341564 0.176470588 0.308641975 204 4 4 235 3R:31677779-31677871 6 CG1815 FBtr0085823|FBtr0085824 31675699|31677452 31677971|31677971 AAGACT 6mer3-8 dme-miR-14-3p 3R + 31677777 31677861 3'utr CG1815 FlyBase G35801.2 ACTTAACCGCGTAGTAAGTAAGACTCATTGTGAAGCCATCAGATGGACTTGGCCTAATCATAGCAACTAGTAGTCTGTAAGGGCA 134 31677804 0.837302632 11 125 726 0.953051643 1.830374783 0.164319249 0.417910448 0.633802817 134 8 2 203 3R:31677777-31677861 6 79 4586 FBgn0039863 1117.306667 23.11666667 35.54333333 0.070705745 3.417447729 2.222639032 -8 -8 -8 0.01 dme-miR-92b-3p 8mer-m1 GTGCAATT 3R 31730930 31730937 + 3R_31730930_31730937_+ 0.596698356 0.596698355 0.596698355 0 ttk FBtr0085826|FBtr0303228|FBtr0085828|FBtr0085830 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 3R + 31730879 31730979 3'utr ttk FlyBase G47480.1 TGGCTTCGATGGAGCTGCAGAAATCTCCAAGCCAGCAGACGTTTTTATGTTGTGCAATTTACCTTTTCAGTTACAATTACACTTATTTTCTAAACCCCCTT 26 31730944 0.904045697 10 26 215 1 1.568201724 0.081081081 0.384615385 0.567567568 26 0 0 37 3R:31730879-31730979 8 ttk FBtr0085830|FBtr0303228|FBtr0085828|FBtr0085826 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 GTGCAATT 8mer-m1 dme-miR-92b-3p 3R + 31730925 31730969 3'utr ttk FlyBase G35814.1 ATGTTGTGCAATTTACCTTTTCAGTTACAATTACACTTATTTTCT 10 31730955 0.949634349 4 10 91 1 1.079181246 0 0.1 0.25 10 0 0 12 3R:31730925-31730969 8 7.5 4587 FBgn0003870 1332.35 36.30666667 55.43333333 0.005629151 0.206573632 0.135297655 -14 -25 -19.5 0.01 dme-miR-317-5p 6mer3-8 GTATCC 3R 31731201 31731206 + 3R_31731201_31731206_+ 1 1 1 0 ttk FBtr0085826|FBtr0303228|FBtr0085828|FBtr0085830 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 3R + 31731103 31731345 3'utr ttk FlyBase G47481.1 GACCGAAAATCAAGTAGTTGCTTTGGCTGACACTTTACAAACCCATCCACTAGGGGTTGCCTTTTTATTGGACACCAGAGCGGCCTTATATGCGAAGTGTATCCGGGCAAGAGTTACACTAAAAACCGAAACTAAACCTGCACTTTTAGATAATTAAACTATATATACACGCGGATATGTTATACATAATGATATAAATAATATATATAAACATTGAATGGTATGTCTAGCTGTAGTTCTATT 67 31731191 0.97868302 31 61 453 0.886075949 1.243038049 0.113924051 0.164179104 0.291139241 67 6 3 70 3R:31731103-31731345 6 ttk FBtr0085830|FBtr0303228|FBtr0085828|FBtr0085826 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 GTATCC 6mer3-8 dme-miR-317-5p 3R + 31731137 31731342 3'utr ttk FlyBase G35815.1 TTACAAACCCATCCACTAGGGGTTGCCTTTTTATTGGACACCAGAGCGGCCTTATATGCGAAGTGTATCCGGGCAAGAGTTACACTAAAAACCGAAACTAAACCTGCACTTTTAGATAATTAAACTATATATACACGCGGATATGTTATACATAATGATATAAATAATATATATAAACATTGAATGGTATGTCTAGCTGTAGTTCT 48 31731191 0.976345758 24 48 310 1 1.857332496 0.222222222 0.3125 0.541666667 48 0 0 72 3R:31731137-31731342 6 12 4588 FBgn0003870 1332.35 36.30666667 55.43333333 0.009006642 0.330517811 0.216476248 10 10 10 0.01 dme-miR-283-5p 6mer3-8 TGATAT 3R 31731292 31731297 + 3R_31731292_31731297_+ 1 1 1 0 ttk FBtr0085826|FBtr0303228|FBtr0085828|FBtr0085830 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 3R + 31731103 31731345 3'utr ttk FlyBase G47481.1 GACCGAAAATCAAGTAGTTGCTTTGGCTGACACTTTACAAACCCATCCACTAGGGGTTGCCTTTTTATTGGACACCAGAGCGGCCTTATATGCGAAGTGTATCCGGGCAAGAGTTACACTAAAAACCGAAACTAAACCTGCACTTTTAGATAATTAAACTATATATACACGCGGATATGTTATACATAATGATATAAATAATATATATAAACATTGAATGGTATGTCTAGCTGTAGTTCTATT 67 31731281 0.97868302 31 61 453 0.886075949 1.243038049 0.113924051 0.164179104 0.291139241 67 6 3 70 3R:31731103-31731345 6 ttk FBtr0085830|FBtr0303228|FBtr0085828|FBtr0085826 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 TGATAT 6mer3-8 dme-miR-283-5p 3R + 31731137 31731342 3'utr ttk FlyBase G35815.1 TTACAAACCCATCCACTAGGGGTTGCCTTTTTATTGGACACCAGAGCGGCCTTATATGCGAAGTGTATCCGGGCAAGAGTTACACTAAAAACCGAAACTAAACCTGCACTTTTAGATAATTAAACTATATATACACGCGGATATGTTATACATAATGATATAAATAATATATATAAACATTGAATGGTATGTCTAGCTGTAGTTCT 48 31731282 0.976345758 24 48 310 1 1.857332496 0.222222222 0.3125 0.541666667 48 0 0 72 3R:31731137-31731342 6 10.5 4589 FBgn0003870 1332.35 36.30666667 55.43333333 0.007880812 0.289203085 0.189416717 11 10 10.5 0.01 dme-miR-31a-5p 6mer3-8 TCTTGC 3R 31731452 31731457 + 3R_31731452_31731457_+ 1 1 1 0 ttk FBtr0085826|FBtr0303228|FBtr0085828|FBtr0085830 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 3R + 31731393 31731552 3'utr ttk FlyBase G47482.1 ATAAAATTATTACAAGCCGAAATCTGAAAACAGAAGCAGGATAATCAATGTAATGTTAATCTTGCGAGAGGGAGCGCAGATCTACCTTGTTGCCTTCAAATGAAGCTAGTTAAAAGTTAATCCCGGGTCTGGGTCAAGGTCGTTGGGCACCCAGCACCAC 27 31731473 0.969651034 15 24 133 0.911764706 1.190331698 0.147058824 0.222222222 0.382352941 27 2 1 31 3R:31731393-31731552 6 ttk FBtr0085830|FBtr0303228|FBtr0085828|FBtr0085826 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 TCTTGC 6mer3-8 dme-miR-31a-5p 3R + 31731441 31731506 3'utr ttk FlyBase G35816.1 TGTAATGTTAATCTTGCGAGAGGGAGCGCAGATCTACCTTGTTGCCTTCAAATGAAGCTAGTTAAA 17 31731474 0.791689802 9 17 105 1 1.414973348 0.076923077 0.529411765 0.692307692 17 0 0 26 3R:31731441-31731506 6 6.5 4590 FBgn0003870 1332.35 36.30666667 55.43333333 0.004878598 0.179030481 0.117257968 -21 -22 -21.5 0.01 dme-miR-282-5p 6mer2-7 GAGGCT 3R 31731787 31731792 + 3R_31731787_31731792_+ 1 1 1 0 ttk FBtr0085826|FBtr0303228|FBtr0085828|FBtr0085830 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 3R + 31731760 31731826 3'utr ttk FlyBase G47484.1 CTATCAAACGATTTATGTTGTATATCGGAGGCTTAAATTATCGCCAAAGAAAATGAAAATCAAAAAC 27 31731775 0.95655443 8 24 199 0.911764706 1.190331698 0.235294118 0.148148148 0.323529412 27 2 1 31 3R:31731760-31731826 6 ttk FBtr0085830|FBtr0303228|FBtr0085828|FBtr0085826 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 GAGGCT 6mer2-7 dme-miR-282-5p 3R + 31731759 31731810 3'utr ttk FlyBase G35819.1 TCTATCAAACGATTTATGTTGTATATCGGAGGCTTAAATTATCGCCAAAGAA 14 31731776 0.965029601 6 13 109 0.857142857 1.255272505 0.238095238 0.428571429 0.619047619 14 3 0 18 3R:31731759-31731810 6 18.5 4591 FBgn0003870 1332.35 36.30666667 55.43333333 0.01388524 0.509548292 0.333734215 12 11 11.5 0.01 dme-bantam-3p 6mer2-7 GATCTC 3R 31731925 31731930 + 3R_31731925_31731930_+ 1 1 1 0 ttk FBtr0085826|FBtr0303228|FBtr0085828|FBtr0085830 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 3R + 31731899 31731942 3'utr ttk FlyBase G47485.1 ACAAAATATTGTTGTTAATGCGAAACGATCTCCAAACAAAATAA 16 31731917 0.904827926 2 16 81 1 1.301029996 0 0.1875 0.35 16 0 0 20 3R:31731899-31731942 6 ttk FBtr0085830|FBtr0303228|FBtr0085828|FBtr0085826 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 GATCTC 6mer2-7 dme-bantam-3p 3R + 31731909 31731937 3'utr ttk FlyBase G35820.1 GTTGTTAATGCGAAACGATCTCCAAACAA 18 31731917 0.887700644 2 16 62 0.958333333 1.361727836 0 0.277777778 0.458333333 18 1 0 23 3R:31731909-31731937 6 16 4592 FBgn0003870 1332.35 36.30666667 55.43333333 0.012008857 0.440690415 0.288634997 8 8 8 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 31732508 31732514 + 3R_31732508_31732514_+ 0.823349562 0.823349562 0.823349562 0 ttk FBtr0085826|FBtr0303228|FBtr0085828|FBtr0085830 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 3R + 31732488 31732519 3'utr ttk FlyBase G47489.1 ATAGAGTCATGCTTTGATGCCCAAAGAAAATG 7 31732505 0.931405691 2 7 40 1 0.84509804 0.142857143 0 0 7 0 0 7 3R:31732488-31732519 7 ttk FBtr0085830|FBtr0303228|FBtr0085828|FBtr0085826 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 31732442 31732524 3'utr ttk FlyBase G35823.1 AAAAATGTCCAAACTCGAAACCTGAACGAGGAATATAGCTACATATATAGAGTCATGCTTTGATGCCCAAAGAAAATGAAAGA 12 31732505 0.925752224 6 12 43 1 1.322219295 0.19047619 0.416666667 0.666666667 12 0 0 21 3R:31732442-31732524 7 6 4593 FBgn0003870 1332.35 36.30666667 55.43333333 0.004503321 0.165258906 0.108238124 3 3 3 0.01 dme-miR-2b-2-5p 6mer3-8 TTGAAG 3R 31734502 31734507 + 3R_31734502_31734507_+ 1 1 1 0 ttk FBtr0085827|FBtr0303227|FBtr0085825|FBtr0085829 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 3R + 31734444 31734579 stop_codon ttk FlyBase G47491.1 TGGCGGAGGGCAAGTCCTTGGCTTTGGCCTCTACCGCACAAACCGCAACGTAAAGACTTTGAAGGACCAGAGTTACGGAAGGACTACGAACGCACAACAACGTTTACCTTAAGCAGCGAGCTCTGAACTGTAGAAT 64 31734503 0.923754968 8 63 223 0.986842105 1.875061263 0.315789474 0.15625 0.289473684 64 1 0 75 3R:31734444-31734579 6 ttk FBtr0085825|FBtr0085829|FBtr0303227|FBtr0085827 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 TTGAAG 6mer3-8 dme-miR-2b-2-5p 3R + 31734475 31734521 stop_codon ttk FlyBase G35826.1 TACCGCACAAACCGCAACGTAAAGACTTTGAAGGACCAGAGTTACGG 33 31734503 0.907535055 3 33 105 1 1.662757832 0.152173913 0.272727273 0.47826087 33 0 0 46 3R:31734475-31734521 6 44.5 4594 FBgn0003870 1332.35 36.30666667 55.43333333 0.033399632 1.225670217 0.802766085 -1 -1 -1 0.01 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 31734686 31734693 + 3R_31734686_31734693_+ 0.631136385 0.631136385 0.631136385 0 ttk FBtr0085827|FBtr0303227|FBtr0085825|FBtr0085829 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 3R + 31734595 31734703 3'utr ttk FlyBase G47492.1 AAGCAATCGTGGCACTCAAACGCAACACACCAGACTCAAAACGATTTTTAGTTAATGTAAACCCGTAAGCAATATTAATTCTAACACTTGCTCCGTCCAGAACGCCTTT 44 31734684 0.969524576 11 42 253 0.923076923 1.681241237 0.134615385 0.136363636 0.269230769 44 4 0 48 3R:31734595-31734703 8 ttk FBtr0085825|FBtr0085829|FBtr0303227|FBtr0085827 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R + 31734665 31734705 3'utr ttk FlyBase G35827.1 AATATTAATTCTAACACTTGCTCCGTCCAGAACGCCTTTTT 26 31734684 0.672753714 6 23 155 0.842105263 1.204119983 0.157894737 0.346153846 0.552631579 26 5 1 32 3R:31734665-31734705 8 31.5 4595 FBgn0003870 1332.35 36.30666667 55.43333333 0.023642436 0.867609254 0.56825015 2 2 2 0.01 dme-miR-986-5p 6mer3-8 ATTCGA 3R 31734814 31734819 + 3R_31734814_31734819_+ 0.972528191 0.990914953 0.981721572 0.013001431 ttk FBtr0085827|FBtr0303227|FBtr0085825|FBtr0085829 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 3R + 31734767 31734904 3'utr ttk FlyBase G47493.1 TGAGCAGTTCAGTGAACTTTAATGACTTTCGGCTTTAATTATAAACAATTCGACTGGCCGCTTACTGGATCCGCACACGATCCGTAAGGCAAGCAACTTTAGAACTTTTCATTTCTCTTTGTGATTTTGTTAAACCTT 57 31734816 0.944035694 18 54 533 0.956521739 1.819543936 0.289855072 0.210526316 0.347826087 57 3 0 66 3R:31734767-31734904 6 ttk FBtr0085825|FBtr0085829|FBtr0303227|FBtr0085827 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 ATTCGA 6mer3-8 dme-miR-986-5p 3R + 31734764 31734841 3'utr ttk FlyBase G35828.1 AATTGAGCAGTTCAGTGAACTTTAATGACTTTCGGCTTTAATTATAAACAATTCGACTGGCCGCTTACTGGATCCGCA 25 31734816 0.980015146 11 23 162 0.951219512 1.591064607 0.097560976 0.48 0.682926829 25 2 0 39 3R:31734764-31734841 6 15.5 4596 FBgn0003870 1332.35 36.30666667 55.43333333 0.01163358 0.42691884 0.279615153 -2 -2 -2 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3R 31734886 31734892 + 3R_31734886_31734892_+ 0.521223855 0.521223855 0.521223855 0 ttk FBtr0085827|FBtr0303227|FBtr0085825|FBtr0085829 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 3R + 31734767 31734904 3'utr ttk FlyBase G47493.1 TGAGCAGTTCAGTGAACTTTAATGACTTTCGGCTTTAATTATAAACAATTCGACTGGCCGCTTACTGGATCCGCACACGATCCGTAAGGCAAGCAACTTTAGAACTTTTCATTTCTCTTTGTGATTTTGTTAAACCTT 57 31734892 0.944035694 18 54 533 0.956521739 1.819543936 0.289855072 0.210526316 0.347826087 57 3 0 66 3R:31734767-31734904 7 ttk FBtr0085825|FBtr0085829|FBtr0303227|FBtr0085827 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 31734873 31734901 3'utr ttk FlyBase G35829.1 TTTCATTTCTCTTTGTGATTTTGTTAAAC 13 31734892 0.61239851 6 13 166 1 1.204119983 0.25 0.230769231 0.375 13 0 0 16 3R:31734873-31734901 7 16.5 4597 FBgn0003870 1332.35 36.30666667 55.43333333 0.012384133 0.45446199 0.297654841 -6 -6 -6 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3R 31735290 31735295 + 3R_31735290_31735295_+ 1 1 1 0 ttk FBtr0085827|FBtr0303227|FBtr0085825|FBtr0085829 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 3R + 31735271 31735310 3'utr ttk FlyBase G47496.1 AACGCAACAAATACGACTTAAGACTTGTGCGCTCAATGAC 15 31735298 0.948357808 6 14 71 0.954545455 1.322219295 0.090909091 0.266666667 0.5 15 1 0 21 3R:31735271-31735310 6 ttk FBtr0085825|FBtr0085829|FBtr0303227|FBtr0085827 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 AAGACT 6mer3-8 dme-miR-14-3p 3R + 31735253 31735314 3'utr ttk FlyBase G35831.1 GATTTTTACAGTTTACTTAACGCAACAAATACGACTTAAGACTTGTGCGCTCAATGACTAGA 15 31735297 0.972504993 6 13 67 0.947368421 1.255272505 0.157894737 0.214285714 0.421052632 14 1 0 18 3R:31735253-31735314 6 13.5 4598 FBgn0003870 1332.35 36.30666667 55.43333333 0.010132473 0.371832538 0.243535779 -8 -7 -7.5 0.01 dme-miR-278-3p 8mer-A1 CCCACCGA 3R 31750719 31750726 + 3R_31750719_31750726_+ 0.678004647 0.678004647 0.678004647 0 CG1910 FBtr0085840|FBtr0085839|FBtr0085841 31750711|31750711|31750711 31751894|31751894|31751894 3R + 31750699 31750755 stop_codon CG1910 FlyBase G47529.1 AAGTGTGTAACTAAACCAATCCCACCGATGGACAATCAACAACTTTAATGCGTTGCA 37 31750727 0.748846817 7 34 139 0.926829268 1.102662342 0.243902439 0.108108108 0.195121951 37 1 2 38 3R:31750699-31750755 8 CG1910 FBtr0085841|FBtr0085840|FBtr0085839 31750711|31750711|31750711 31751894|31751894|31751894 CCCACCGA 8mer-A1 dme-miR-278-3p 3R + 31750700 31750743 stop_codon CG1910 FlyBase G35853.2 AGTGTGTAACTAAACCAATCCCACCGATGGACAATCAACAACTT 19 31750718 0.842783658 4 18 48 1 1.505149978 0.15625 0.473684211 0.6875 19 0 0 32 3R:31750700-31750743 8 25.5 4599 FBgn0022349 2973.373333 120.6666667 184.89 0.008576118 0.211325967 0.137919844 -8 1 -3.5 0.01 dme-miR-92b-3p 6mer2-7 TGCAAT 3R 31750956 31750961 + 3R_31750956_31750961_+ 1 1 1 0 CG1910 FBtr0085840|FBtr0085839|FBtr0085841 31750711|31750711|31750711 31751894|31751894|31751894 3R + 31750863 31751168 3'utr CG1910 FlyBase G47530.1 AATTGATAACTTGATTTCGTACTCCGAAATCCCTTAACTTTGATAATAGTTCGCGTCCTCCAGTATTTGGTTGACGCGAAGGACGCCATAGGCTGCAATCGATGCTGGACTTTCAATGCTGCGGTGTGTGCGTCAGCTGGACAGAAAAACAAAAAAAAAAAGTACCCTAAGACCCTCCCACCCACTCCCCCCGAAATGCACAGACAGATTGTAAAATGCATCTTAATATAATATGTATGTGGATAATTAATCAAATTGGAATCAAACAAATTATACATTAACGGAAAATGTATGTAAAATAGATGT 135 31750951 0.979370626 36 130 730 0.954545455 2.167317335 0.142857143 0.125925926 0.233766234 135 7 0 147 3R:31750863-31751168 6 CG1910 FBtr0085841|FBtr0085840|FBtr0085839 31750711|31750711|31750711 31751894|31751894|31751894 TGCAAT 6mer2-7 dme-miR-92b-3p 3R + 31750929 31750977 3'utr CG1910 FlyBase G35856.1 TTGGTTGACGCGAAGGACGCCATAGGCTGCAATCGATGCTGGACTTTCA 26 31750951 0.951057747 6 26 109 1 1.643452676 0.113636364 0.5 0.704545455 26 0 0 44 3R:31750929-31750977 6 39 4600 FBgn0022349 2973.373333 120.6666667 184.89 0.013116415 0.32320442 0.210936232 5 5 5 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 3R 31774881 31774886 + 3R_31774881_31774886_+ 1 1 1 0 sip3 FBtr0330113 31774718 31775163 3R + 31774814 31774891 3'utr sip3 FlyBase G47543.1 ACACTTAATTCTCTTGGCTGGTATTGATTTCCTTTATACTTCGCTCTTCATCTGCTGCACCTTGTCCTTGACTTCTGT 15 31774851 0.964153108 10 13 173 0.8125 1.113943352 0 0.066666667 0.125 15 3 0 13 3R:31774814-31774891 6 sip3 FBtr0330113 31774718 31775163 TTGACT 6mer3-8 dme-miR-1012-3p 3R + 31774851 31774887 3'utr sip3 FlyBase G35864.1 ACTTCGCTCTTCATCTGCTGCACCTTGTCCTTGACTT 7 31774867 0.794892504 5 7 60 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3R:31774851-31774887 6 4 4601 FBgn0039875 945.4166667 44.41666667 67.76 0.004230939 0.090056285 0.059031877 30 14 22 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 31775062 31775067 + 3R_31775062_31775067_+ 1 1 1 0 sip3 FBtr0330113 31774718 31775163 3R + 31775036 31775121 3'utr sip3 FlyBase G47544.1 TAAAAACTATTTTAGAGATGGGAAACTGATGATTTGTATTTAATATTACTATATGTGTATAATTAATGTGAAATATAATTAAAACG 32 31775068 0.808816397 14 30 255 0.914285714 1.505149978 0.257142857 0.09375 0.171428571 32 3 0 32 3R:31775036-31775121 6 sip3 FBtr0330113 31774718 31775163 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R + 31775037 31775111 3'utr sip3 FlyBase G35865.1 AAAAACTATTTTAGAGATGGGAAACTGATGATTTGTATTTAATATTACTATATGTGTATAATTAATGTGAAATAT 22 31775066 0.989861589 11 20 196 0.931034483 1.130333768 0.103448276 0.227272727 0.413793103 22 1 1 27 3R:31775037-31775111 6 20 4602 FBgn0039875 945.4166667 44.41666667 67.76 0.021154694 0.450281426 0.295159386 -6 -4 -5 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 3R 31790318 31790323 + 3R_31790318_31790323_+ 1 1 1 0 faf FBtr0307550 31789720 31790681 3R + 31790255 31790353 3'utr faf FlyBase G47597.1 ATTTATATAGTATATAAATGATGTATTACGTATTGAAGCCGAGCAACACTTACTATACTAACCGAAAAAAATCAAAATGATGGACACTTAGATACGATA 13 31790334 0.969922255 8 12 74 0.9375 1.176091259 0.125 0.230769231 0.375 13 1 0 15 3R:31790255-31790353 6 faf FBtr0307550 31789720 31790681 GAAAAA 6mer3-8 dme-miR-980-5p 3R + 31790318 31790351 3'utr faf FlyBase G35908.1 GAAAAAAATCAAAATGATGGACACTTAGATACGA 7 31790335 0.796123227 3 7 28 1 0.954242509 0 0.142857143 0.333333333 7 0 0 9 3R:31790318-31790351 5 5.5 4603 FBgn0005632 5381.21 66.68333333 101.8566667 0.001022075 0.08247938 0.053997447 -16 -17 -16.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 31790407 31790412 + 3R_31790407_31790412_+ 1 1 1 0 faf FBtr0307550 31789720 31790681 3R + 31790369 31790440 3'utr faf FlyBase G47598.1 CGAAACGAATCGGCTGATTGTAAGAATTAGGGCAAGAAACCAAATTGCATCTTTAGTACTCAGTACTCGCCT 31 31790414 0.7402301 6 26 133 0.916666667 1.51851394 0.027777778 0.161290323 0.277777778 31 3 0 33 3R:31790369-31790440 6 faf FBtr0307550 31789720 31790681 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 31790366 31790435 3'utr faf FlyBase G35909.1 AATCGAAACGAATCGGCTGATTGTAAGAATTAGGGCAAGAAACCAAATTGCATCTTTAGTACTCAGTACT 21 31790414 0.928868733 6 20 92 1 1.491361694 0.096774194 0.333333333 0.548387097 21 0 0 31 3R:31790366-31790435 6 16.5 4604 FBgn0005632 5381.21 66.68333333 101.8566667 0.003066225 0.24743814 0.161992342 -7 -7 -7 0.01 dme-bantam-3p 7mer-m8 TGATCTC 3R 31799548 31799554 + 3R_31799548_31799554_+ 0.661615243 0.661615243 0.661615243 0 Acf1 FBtr0085845 31799537 31799799 3R + 31799516 31799578 stop_codon Acf1 FlyBase G47617.1 ACGGGGAAGTCAAAGCTTGCTGAGCCGGACGCTGATCTCCACCAGCTATCGTGTAAATTAGTT 59 31799548 0.898505178 6 59 247 1 1.86923172 0.135135135 0.186440678 0.351351351 59 0 0 74 3R:31799516-31799578 7 Acf1 FBtr0085845 31799537 31799799 TGATCTC 7mer-m8 dme-bantam-3p 3R + 31799511 31799568 stop_codon Acf1 FlyBase G35921.1 TATGAACGGGGAAGTCAAAGCTTGCTGAGCCGGACGCTGATCTCCACCAGCTATCGTG 31 31799548 0.942977895 4 28 114 0.909090909 1.301029996 0.159090909 0.258064516 0.477272727 31 3 1 40 3R:31799511-31799568 7 41 4605 FBgn0027620 2508.1 60.07666667 92.65666667 0.016347036 0.682461299 0.442493794 0 0 0 0.01 dme-miR-33-5p 7mer-A1 AATGCAA 3R 31851120 31851126 - 3R_31851120_31851126_- 0.782911824 0.782911824 0.782911824 0 heph FBtr0300267|FBtr0300268|FBtr0300266|FBtr0300269|FBtr0085880|FBtr0112864|FBtr0085888|FBtr0112866|FBtr0085881|FBtr0085884|FBtr0085883|FBtr0085887|FBtr0085879|FBtr0300263|FBtr0306692|FBtr0085885|FBtr0085886|FBtr0306693|FBtr0085882 31851018|31851018|31851018|31846985|31851018|31850247|31851018|31846985|31850980|31851018|31851018|31851018|31851018|31850980|31851018|31851018|31851018|31851018|31851018 31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854 3R - 31851108 31851165 5'utr heph FlyBase G56120.1 TTTTATTATGTACATGATGCTGTTATTATATTTTAAATGAATGCAACTTAACTTTAGT 10 31851148 0.82409851 5 10 106 1 1.176091259 0.066666667 0.3 0.533333333 10 0 0 15 3R:31851108-31851165 7 heph FBtr0085882|FBtr0085883|FBtr0306693|FBtr0085885|FBtr0306692|FBtr0300263|FBtr0085879|FBtr0085887|FBtr0085886|FBtr0085884|FBtr0300267|FBtr0085881|FBtr0112864|FBtr0300266|FBtr0300269|FBtr0085880|FBtr0112866|FBtr0085888|FBtr0300268 31851018|31851018|31851018|31851018|31851018|31850980|31851018|31851018|31851018|31851018|31851018|31850980|31850247|31851018|31846985|31851018|31846985|31851018|31851018 31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854 AATGCAA 7mer-A1 dme-miR-33-5p 3R - 31851106 31851160 5'utr heph FlyBase G42362.1 TTATGTACATGATGCTGTTATTATATTTTAAATGAATGCAACTTAACTTTAGTTT 9 31851149 0.988610618 4 9 94 1 1.079181246 0.5 0.222222222 0.416666667 9 0 0 12 3R:31851106-31851160 7 2.5 4606 FBgn0011224 1726 50.21 76.84333333 0.001448436 0.049790878 0.032533727 22 23 22.5 0.01 dme-miR-980-3p 6mer3-8 GGCAGC 3R 31851752 31851757 - 3R_31851752_31851757_- 1 1 1 0 heph FBtr0300267|FBtr0300268|FBtr0300266|FBtr0346192|FBtr0300269|FBtr0300265|FBtr0085880|FBtr0112864|FBtr0085888|FBtr0112866|FBtr0085881|FBtr0085884|FBtr0085883|FBtr0112865|FBtr0085887|FBtr0085878|FBtr0300270|FBtr0085879|FBtr0300263|FBtr0300264|FBtr0306692|FBtr0085885|FBtr0085886|FBtr0306693|FBtr0085882 31851018|31851018|31851018|31851482|31846985|31851482|31851018|31850247|31851018|31846985|31850980|31851018|31851018|31851482|31851018|31851482|31851482|31851018|31850980|31851482|31851018|31851018|31851018|31851018|31851018 31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854 3R - 31851709 31851778 5'utr heph FlyBase G56121.1 AGCAACACCTTCAGATCCATTGGCAGCAACAAATACAAACTATAATCCGTAGTACAAGAAAAATGCACGC 58 31851758 0.931350159 3 56 207 0.971014493 1.525044807 0.043478261 0.172413793 0.304347826 58 1 1 67 3R:31851709-31851778 6 heph FBtr0085882|FBtr0085883|FBtr0306693|FBtr0300270|FBtr0085885|FBtr0306692|FBtr0300264|FBtr0300263|FBtr0085879|FBtr0085878|FBtr0085887|FBtr0085886|FBtr0112865|FBtr0085884|FBtr0300267|FBtr0085881|FBtr0112864|FBtr0300266|FBtr0300269|FBtr0085880|FBtr0346192|FBtr0300265|FBtr0112866|FBtr0085888|FBtr0300268 31851018|31851018|31851018|31851482|31851018|31851018|31851482|31850980|31851018|31851482|31851018|31851018|31851482|31851018|31851018|31850980|31850247|31851018|31846985|31851018|31851482|31851482|31846985|31851018|31851018 31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 31851740 31851777 5'utr heph FlyBase G42363.1 GCAACACCTTCAGATCCATTGGCAGCAACAAATACAAA 32 31851758 0.771111603 3 31 101 0.943396226 1.698970004 0.018867925 0.46875 0.679245283 32 3 0 50 3R:31851740-31851777 6 44 4607 FBgn0011224 1726 50.21 76.84333333 0.025492468 0.876319458 0.572593589 1 1 1 0.01 dme-miR-8-3p 7mer-m8 CAGTATT 3R 32045473 32045479 - 3R_32045473_32045479_- 0.661615243 0.661615243 0.661615243 0 krz FBtr0085877 32045312 32049027 3R - 32045450 32045499 3'utr krz FlyBase G56126.1 TTTAATTTTTATATATTTGTCAGTATTGTTGCACCTCTTAGGTAGTAATT 20 32045481 0.782789772 5 18 244 0.904761905 1.278753601 0 0.05 0.095238095 20 2 0 19 3R:32045450-32045499 7 krz FBtr0085877 32045312 32049027 CAGTATT 7mer-m8 dme-miR-8-3p 3R - 32045449 32045496 3'utr krz FlyBase G42366.1 AATTTTTATATATTTGTCAGTATTGTTGCACCTCTTAGGTAGTAATTA 20 32045482 0.750792569 6 18 256 0.911764706 1.491361694 0 0.45 0.676470588 20 3 0 31 3R:32045449-32045496 7 19.5 4608 FBgn0040206 850.0433333 33.93333333 51.95666667 0.022940007 0.574656189 0.375312761 2 3 2.5 0.01 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3R 32046205 32046210 - 3R_32046205_32046210_- 0.693144641 0.849450623 0.771297632 0.110525033 krz FBtr0085877 32045312 32049027 3R - 32046186 32046226 3'utr krz FlyBase G56128.1 ATGGAGAAAGAACATTTTTGACTGACACGTTGGAGCTCCAT 9 32046210 0.646443106 4 9 64 1 1 0.1 0.111111111 0.2 9 0 0 10 3R:32046186-32046226 6 krz FBtr0085877 32045312 32049027 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3R - 32046108 32046229 3'utr krz FlyBase G42367.1 AATATGGAGAAAGAACATTTTTGACTGACACGTTGGAGCTCCATAAGAGAGGAAAAAAGAGTGGACTTTTGGAAAAGACTATGTTTGAAAAGCTTTAATATTGTATAATTAACAATGCATTG 20 32046210 0.961309543 11 19 151 0.964285714 1.431363764 0.285714286 0.3 0.5 20 1 0 27 3R:32046108-32046229 6 9.5 4609 FBgn0040206 850.0433333 33.93333333 51.95666667 0.011175901 0.279960707 0.182844678 0 0 0 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3R 32046688 32046694 - 3R_32046688_32046694_- 0.521223855 0.521223855 0.521223855 0 krz FBtr0085877 32045312 32049027 3R - 32046662 32046728 3'utr krz FlyBase G56130.1 ACTGTGAGTTACATGTTCTTATTTGTTAAAATGGTGTGATTTTTAAGAAGCTAAGATAACTTTTAAG 16 32046688 0.990882122 6 16 162 1 1.278753601 0.263157895 0.1875 0.315789474 16 0 0 19 3R:32046662-32046728 7 krz FBtr0085877 32045312 32049027 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 32046636 32046749 3'utr krz FlyBase G42368.1 TATGAGCAACATCACTTTTGTACTGTGAGTTACATGTTCTTATTTGTTAAAATGGTGTGATTTTTAAGAAGCTAAGATAACTTTTAAGATAAGTTGTAATGGTTTTGATAATAC 23 32046687 0.98952881 13 22 213 0.971428571 1.531478917 0.342857143 0.391304348 0.6 23 1 0 34 3R:32046636-32046749 7 14 4610 FBgn0040206 850.0433333 33.93333333 51.95666667 0.016469749 0.412573674 0.269455315 -6 -7 -6.5 0.01 dme-miR-12-5p 6mer2-7 ATACTC 3R 32047961 32047966 - 3R_32047961_32047966_- 1 1 1 0 krz FBtr0085877 32045312 32049027 3R - 32047929 32047983 3'utr krz FlyBase G56134.1 TTGGGAACGAGAAAATGATACTCTGGTATATCAACTATACCGTTCTCTCTTGTAA 5 32047968 0.986891229 2 5 37 1 0.698970004 0.2 0 0 5 0 0 5 3R:32047929-32047983 6 krz FBtr0085877 32045312 32049027 ATACTC 6mer2-7 dme-miR-12-5p 3R - 32047954 32048000 3'utr krz FlyBase G42370.1 ATAGCTCTATCACTAGTTTGGGAACGAGAAAATGATACTCTGGTATA 5 32047968 0.962797288 3 5 30 1 0.84509804 0.571428571 0.2 0.428571429 5 0 0 7 3R:32047954-32048000 6 3.5 4611 FBgn0040206 850.0433333 33.93333333 51.95666667 0.004117437 0.103143418 0.067363829 2 2 2 0.01 dme-miR-184-3p 6mer3-8 TCCGTC 3R 32048094 32048099 - 3R_32048094_32048099_- 1 1 1 0 krz FBtr0085877 32045312 32049027 3R - 32048080 32048116 3'utr krz FlyBase G56135.1 AAGTCGATCTGACCATTTCCGTCTGTCTGTATAAACG 8 32048100 0.757744421 2 8 59 1 1.079181246 0.083333333 0.375 0.583333333 8 0 0 12 3R:32048080-32048116 6 krz FBtr0085877 32045312 32049027 TCCGTC 6mer3-8 dme-miR-184-3p 3R - 32048088 32048109 3'utr krz FlyBase G42371.1 TCTGACCATTTCCGTCTGTCTG 6 32048100 0.696338536 2 6 44 1 0.954242509 0.111111111 0.5 0.666666667 6 0 0 9 3R:32048088-32048109 6 6.5 4612 FBgn0040206 850.0433333 33.93333333 51.95666667 0.007646669 0.191552063 0.125104254 1 1 1 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 32048592 32048597 - 3R_32048592_32048597_- 1 1 1 0 krz FBtr0085877 32045312 32049027 3R - 32048575 32048614 3'utr krz FlyBase G56136.1 TCATTTACAAATTCTAATGATCTTTTTATTATGCCTCTTC 28 32048597 0.819447854 2 28 300 1 1.568201724 0 0.285714286 0.459459459 28 0 0 37 3R:32048575-32048614 6 krz FBtr0085877 32045312 32049027 TGATCT 6mer3-8 dme-bantam-3p 3R - 32048575 32048610 3'utr krz FlyBase G42372.1 TTACAAATTCTAATGATCTTTTTATTATGCCTCTTC 29 32048597 0.793438864 4 27 294 0.944444444 1.531478917 0 0.172413793 0.333333333 29 2 0 34 3R:32048575-32048610 6 28.5 4613 FBgn0040206 850.0433333 33.93333333 51.95666667 0.033527703 0.839882122 0.548534035 0 0 0 0.01 dme-miR-980-5p 7mer-m1 AAAAACT 3R 32056077 32056083 - 3R_32056077_32056083_- 0.765586663 0.765586663 0.765586663 0 Map205 FBtr0334299 32055277 32057321 3R - 32056034 32056113 3'utr Map205 FlyBase G56146.1 TATAATTTGTTGTTTATGCCACATGGATCAAAAAACTGAATGTATCTCCAGCACACTTATACGCTCTTTATTTGTCTGTT 81 32056073 0.810942382 9 78 439 0.9375 1.954242509 0.083333333 0.160493827 0.291666667 81 6 0 90 3R:32056034-32056113 7 Map205 FBtr0334299 32055277 32057321 AAAAACT 7mer-m1 dme-miR-980-5p 3R - 32056029 32056102 3'utr Map205 FlyBase G42381.1 GTTTATGCCACATGGATCAAAAAACTGAATGTATCTCCAGCACACTTATACGCTCTTTATTTGTCTGTTTAATA 61 32056073 0.943312205 10 60 327 0.988372093 1.929418926 0.104651163 0.37704918 0.558139535 61 1 0 85 3R:32056029-32056102 7 58.5 4614 FBgn0002645 6812.85 163.95 251.4733333 0.008586715 0.356816102 0.23262904 -10 -10 -10 0.01 dme-miR-14-3p 8mer-A1 AAGACTGA 3R 4241694 4241701 - 3R_4241694_4241701_- 0.643565469 0.643565469 0.643565469 0 CG14642 FBtr0089688 4241043 4241883 3R - 4241688 4241712 5'utr CG14642 FlyBase G47748.1 CACGATTCTCTAAGACTGACGGAAT 7 4241704 0.610135787 3 7 29 1 1.041392685 0.636363636 0.285714286 0.545454545 7 0 0 11 3R:4241688-4241712 8 CG14642 FBtr0089688 4241043 4241883 AAGACTGA 8mer-A1 dme-miR-14-3p 3R - 4241663 4241714 5'utr CG14642 FlyBase G36027.1 AACACGATTCTCTAAGACTGACGGAATACGTTAGACCTGTCCGCCTGTGGGT 11 4241703 0.965671453 5 9 47 0.909090909 1 0.181818182 0.1 0.181818182 10 1 0 10 3R:4241663-4241714 8 8.5 4615 FBgn0037222 149 13.89666667 21.19333333 0.05704698 0.611657472 0.401069519 3 2 2.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 4309853 4309858 - 3R_4309853_4309858_- 1 1 1 0 Vps24 FBtr0078958 4309645 4309972 3R - 4309830 4309878 3'utr Vps24 FlyBase G47754.1 GCCGTCATTTGATTGTAGAAACCAAAATAATCTCCAGAAACTTGAATTG 34 4309851 0.908767257 4 30 141 0.869565217 1.301029996 0.195652174 0.235294118 0.434782609 34 5 1 40 3R:4309830-4309878 6 Vps24 FBtr0078958 4309645 4309972 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 4309832 4309891 3'utr Vps24 FlyBase G36029.1 CGGCAACCCCCACGCCGTCATTTGATTGTAGAAACCAAAATAATCTCCAGAAACTTGAAT 23 4309851 0.91749943 2 21 72 0.96875 1.491361694 0.34375 0.347826087 0.53125 23 1 0 31 3R:4309832-4309891 6 27.5 4616 FBgn0037231 389.0533333 43.63 67.21 0.070684396 0.630300252 0.409165303 -7 -7 -7 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 3R 4309916 4309921 - 3R_4309916_4309921_- 0.914671162 0.932864155 0.923767658 0.012864394 Vps24 FBtr0078958 4309645 4309972 3R - 4309900 4310158 stop_codon Vps24 FlyBase G47755.1 AAGGAGGTGGACAAGGTTTTGTGGGAGATCACAGATGGCAAGCTCGGGGAAGCTCCCCTGCCTCCAGAGGCTACACCGGCGGACAAGGCGTCTGCGTCTGCTGCGCGCGTCGAGGCTGAGCAGGACGATGAGGAGGGTGAGGAACTGCAAGAGATGCAAAGCCGCCTGGCCTCGCTGCGATCTTAAAACAACTGCTATGGGTATTTTATTTAGATTTGAAATTAAAGGCAAGTGATTTTGACTGGCAGACCTTATCAAA 70 4309922 0.927576483 28 68 373 0.962025316 1.278753601 0.265822785 0.128571429 0.227848101 70 0 3 76 3R:4309900-4310158 6 Vps24 FBtr0078958 4309645 4309972 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 4309902 4309948 3'utr Vps24 FlyBase G36030.1 TAGATTTGAAATTAAAGGCAAGTGATTTTGACTGGCAGACCTTATCA 27 4309922 0.602196842 7 25 171 1 1.568201724 0.081081081 0.307692308 0.513513514 26 0 0 37 3R:4309902-4309948 6 27 4617 FBgn0037231 389.0533333 43.63 67.21 0.069399225 0.618840248 0.401725934 1 1 1 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 4326194 4326199 + 3R_4326194_4326199_+ 1 1 1 0 CG9795 FBtr0100617 4325834 4326379 3R + 4326176 4326255 3'utr CG9795 FlyBase G39927.1 GATTAACTAAGAAAACCTGTACCTATCGAAATGAACAAAAATCAAAATCTATATAGACGCAAAAAGCCTAGAATTTAAAT 119 4326193 0.925950816 5 119 426 1 2.193124598 0.153846154 0.260504202 0.435897436 119 0 0 156 3R:4326176-4326255 6 CG9795 FBtr0100617 4325834 4326379 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 4326170 4326270 3'utr CG9795 FlyBase G30160.1 GTGGATGATTAACTAAGAAAACCTGTACCTATCGAAATGAACAAAAATCAAAATCTATATAGACGCAAAAAGCCTAGAATTTAAATAATAATTAAGTAGGT 118 4326193 0.926434285 7 115 421 0.97515528 1.894869657 0.204968944 0.271186441 0.465838509 118 3 1 157 3R:4326170-4326270 6 108 4618 FBgn0037234 468.08 20.74666667 31.52333333 0.23072979 5.205655527 3.426033626 1 1 1 0.01 dme-miR-252-5p 6mer3-8 GTACTT 3R 4339593 4339598 + 3R_4339593_4339598_+ 1 1 1 0 CG1103 FBtr0078909|FBtr0111220 4339503|4339503 4339914|4339914 3R + 4339482 4339640 stop_codon CG1103 FlyBase G39935.1 AGACCGCCATAATGCTGTACTAAGGAAGGCGAGAAGGATTCCCAAATGAACCTCTACGAAGTTGCTTGGCAAACGTACGAGCAGCGACACCTAGTAATCTCAGTGGCTCAAGTACTTGTGCCTTACTTAATGCCTTTACCTTGCCAACAACAAGGGCCG 280 4339576 0.961500423 17 267 1335 0.956386293 2.010017121 0.439252336 0.125 0.236760125 280 12 2 307 3R:4339482-4339640 6 CG1103 FBtr0078909|FBtr0111220 4339503|4339503 4339914|4339914 GTACTT 6mer3-8 dme-miR-252-5p 3R + 4339482 4339739 stop_codon CG1103 FlyBase G30167.1 AGACCGCCATAATGCTGTACTAAGGAAGGCGAGAAGGATTCCCAAATGAACCTCTACGAAGTTGCTTGGCAAACGTACGAGCAGCGACACCTAGTAATCTCAGTGGCTCAAGTACTTGTGCCTTACTTAATGCCTTTACCTTGCCAACAACAAGGGCCGTCTATATACTCATTTCAGTTTATGGTATATTCGTTTAAATAAGCGTACAATGACTTCGCCTGACTGGCCTGCCGATCTTTCATCGGAATAAGACAAACT 191 4339576 0.965606512 34 182 969 0.964788732 1.960629308 0.338028169 0.387434555 0.588028169 191 8 2 274 3R:4339482-4339739 6 33 4619 FBgn0037235 527 52.31333333 79.92333333 0.062618596 0.630814324 0.412895692 17 17 17 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 4389455 4389461 + 3R_4389455_4389461_+ 0.658999527 0.658999527 0.658999527 0 tub FBtr0302338 4389383 4389813 3R + 4389432 4389478 3'utr tub FlyBase G39971.2 ATGCAACCCAGATGTATTCATTTGGCAGCTGGGTGTGGACCTTCTTA 321 4389454 0.790789293 8 314 2679 0.980769231 2.552668216 0.271978022 0.118380062 0.222527473 321 7 0 357 3R:4389432-4389478 7 tub FBtr0302338 4389383 4389813 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 4389382 4389496 stop_codon tub FlyBase G30187.1 TAGATAAAAGCACCGACCATCGGCGGAGATGACATTCCGTTCGATAACTTATGCAACCCAGATGTATTCATTTGGCAGCTGGGTGTGGACCTTCTTATGTTATGCATGAGGTCCA 242 4389453 0.986216904 15 234 1977 0.972826087 2.076761772 0.320652174 0.400826446 0.605978261 242 8 2 358 3R:4389382-4389496 7 274 4620 FBgn0003882 635 38.28 58.43666667 0.431496063 7.157784744 4.688836917 1 2 1.5 0.01 dme-miR-304-5p 7mer-A1 GAGATTA 3R 4391721 4391727 + 3R_4391721_4391727_+ 0.823349562 0.823349562 0.823349562 0 CG14646 FBtr0078919|FBtr0302339 4391706|4391706 4392111|4391999 3R + 4391686 4391793 stop_codon CG14646 FlyBase G39980.2 AGATACTAATGACACCACGTGATTTATGACTGTTAGAGATTAAAGGACTCTTAAATCGAACCTGGTTCTTTATTGGTCTTATTTAAGTGTAATCATTTTCAATACAGT 387 4391718 0.985353884 12 377 3097 0.971800434 1.95230801 0.444685466 0.162790698 0.297180043 387 9 4 448 3R:4391686-4391793 7 CG14646 FBtr0302339|FBtr0078919 4391706|4391706 4391999|4392111 GAGATTA 7mer-A1 dme-miR-304-5p 3R + 4391686 4391779 stop_codon CG14646 FlyBase G30192.1 AGATACTAATGACACCACGTGATTTATGACTGTTAGAGATTAAAGGACTCTTAAATCGAACCTGGTTCTTTATTGGTCTTATTTAAGTGTAATC 340 4391718 0.726478229 16 329 2643 0.976608187 2.222716471 0.442495127 0.361764706 0.576998051 340 10 2 501 3R:4391686-4391779 7 310.5 4621 FBgn0037241 543.83 41.31666667 62.96 0.570950481 7.515127067 4.931702668 3 3 3 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 4391914 4391919 + 3R_4391914_4391919_+ 1 1 1 0 CG14646 FBtr0078919|FBtr0302339 4391706|4391706 4392111|4391999 3R + 4391853 4391997 3'utr CG14646 FlyBase G39981.1 CACTTTTTAATACTTTAACAATCTAAGCAATCCTAATATTTTTATTTTACTTAAGTACAATTGATCTAAGCATAGACAGAAAGAGTGTTCATATGAGAAATATGCCTTAATATGCTCTGCATAGGAAACCTGTAGTGCAATAAGT 66 4391914 0.979407576 17 66 464 1 1.886490725 0.311688312 0.151515152 0.272727273 66 0 0 77 3R:4391853-4391997 6 CG14646 FBtr0302339|FBtr0078919 4391706|4391706 4391999|4392111 TGATCT 6mer3-8 dme-bantam-3p 3R + 4391896 4391977 3'utr CG14646 FlyBase G30193.1 ATTTTACTTAAGTACAATTGATCTAAGCATAGACAGAAAGAGTGTTCATATGAGAAATATGCCTTAATATGCTCTGCATAGG 29 4391914 0.822069698 10 29 176 1 1.681241237 0.229166667 0.586206897 0.75 29 0 0 48 3R:4391896-4391977 6 21 4622 FBgn0037241 543.83 41.31666667 62.96 0.038615008 0.508269463 0.333545108 0 0 0 0.01 dme-miR-31a-5p 6mer3-8 TCTTGC 3R 4396297 4396302 - 3R_4396297_4396302_- 1 0.999888966 0.999944483 7.85E-05 CG9855 FBtr0339552|FBtr0078950 4395977|4396162 4396375|4396375 3R - 4396269 4396308 3'utr CG9855 FlyBase G47790.1 TTTACCTCTTGCACTTTCAAGACGCTCACATCACCACCTA 6 4396298 0.880053025 3 5 36 0.833333333 0.698970004 0.166666667 0 0 6 1 0 5 3R:4396269-4396308 6 CG9855 FBtr0339552|FBtr0078950 4395977|4396162 4396375|4396375 TCTTGC 6mer3-8 dme-miR-31a-5p 3R - 4396229 4396336 3'utr CG9855 FlyBase G36053.1 GAGTTATGGTTTGTTTTAAGTTAATTGTTTTACCTCTTGCACTTTCAAGACGCTCACATCACCACCTAATTTAGGTGGACAAAAATTTTTAATTGTCTGCAGATAACA 11 4396299 0.985564542 7 11 93 1 1.176091259 0.2 0.363636364 0.533333333 11 0 0 15 3R:4396229-4396336 6 4 4623 FBgn0037242 314.87 22.8 34.92 0.012703655 0.175438596 0.114547537 -4 -3 -3.5 0.01 dme-miR-965-3p 6mer2-7 ACGCTT 3R 4406576 4406581 + 3R_4406576_4406581_+ 1 1 1 0 lost FBtr0078921 4406254 4407182 3R + 4406556 4406604 3'utr lost FlyBase G40000.1 AACGAGAACACAAATCATTGACGCTTTTTCTAAACAATTGCATTTGTTT 19 4406574 0.986775884 5 18 154 0.958333333 1.361727836 0 0.210526316 0.375 19 1 0 23 3R:4406556-4406604 6 lost FBtr0078921 4406254 4407182 ACGCTT 6mer2-7 dme-miR-965-3p 3R + 4406558 4406605 3'utr lost FlyBase G30215.1 CGAGAACACAAATCATTGACGCTTTTTCTAAACAATTGCATTTGTTTT 18 4406574 0.941683695 7 16 153 0.888888889 1.380211242 0 0.388888889 0.592592593 18 3 0 24 3R:4406558-4406605 6 15 4624 FBgn0263594 9369.39 424.1766667 652.24 0.001600958 0.035362624 0.02299767 2 2 2 0.01 dme-miR-33-5p 7mer-m8 CAATGCA 3R 4407037 4407043 + 3R_4407037_4407043_+ 0.674515173 0.674515162 0.674515167 0 lost FBtr0078921 4406254 4407182 3R + 4406987 4407057 3'utr lost FlyBase G40002.1 AATAATATTTTTAACAGAAGAACAAGAAATGTGTGAAAGCAAGAATTATACAATGCAGAACATAATTATAC 11 4407016 0.958451427 7 10 49 0.857142857 1.079181246 0.214285714 0.272727273 0.428571429 11 2 0 12 3R:4406987-4407057 7 lost FBtr0078921 4406254 4407182 CAATGCA 7mer-m8 dme-miR-33-5p 3R + 4407001 4407074 3'utr lost FlyBase G30220.1 CAGAAGAACAAGAAATGTGTGAAAGCAAGAATTATACAATGCAGAACATAATTATACAAGGCAGAACATAATTA 11 4407016 0.952301523 7 10 42 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 3R:4407001-4407074 7 5 4625 FBgn0263594 9369.39 424.1766667 652.24 0.000533653 0.011787541 0.00766589 21 21 21 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 4423176 4423182 - 3R_4423176_4423182_- 0.801970437 0.801970437 0.801970437 0 srl FBtr0301244|FBtr0301244|FBtr0301244|FBtr0078946|FBtr0078946|FBtr0078946|FBtr0336458|FBtr0336458|FBtr0336458 4422886|4422886|4422886|4422481|4422481|4422481|4422886|4422886|4422886 4423464|4423464|4423464|4423464|4423464|4423464|4423464|4423464|4423464 3R - 4423135 4423300 3'utr srl FlyBase G47814.1 CTTAAAATAGTTGACAGAGCTATACAATGCAAGCAATAAAAACATTGCAATGTACATTAGGATAATTGTAATTACCGTGAAGGAAACCTAACAACAAGAATTGAAAAGAAAATGAAATTGTGATAACCGCGTAATGCATACAAAGTCATTTAAAGCACGTAAGTTA 223 4423183 0.960075895 21 210 1122 0.945525292 1.431363764 0.186770428 0.139013453 0.252918288 223 6 8 243 3R:4423135-4423300 7 srl FBtr0336458|FBtr0336458|FBtr0336458|FBtr0301244|FBtr0301244|FBtr0301244|FBtr0078946|FBtr0078946|FBtr0078946 4422886|4422886|4422886|4422886|4422886|4422886|4422481|4422481|4422481 4423464|4423464|4423464|4423464|4423464|4423464|4423464|4423464|4423464 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 4423154 4423357 3'utr srl FlyBase G36072.1 AATTTCCGAAGTCTCTATCTATAAACCTGAGAAGCCTGATTACAATTCTTAATTTATCTTAAAATAGTTGACAGAGCTATACAATGCAAGCAATAAAAACATTGCAATGTACATTAGGATAATTGTAATTACCGTGAAGGAAACCTAACAACAAGAATTGAAAAGAAAATGAAATTGTGATAACCGCGTAATGCATACAAAGTC 169 4423183 0.829477446 19 157 848 0.95 1.915575699 0.157692308 0.426035503 0.626923077 169 11 2 247 3R:4423154-4423357 7 136.5 4626 FBgn0037248 2796.273333 78.52666667 121.16 0.04881497 1.73826301 1.126609442 1 1 1 0.01 dme-miR-190-5p 6mer3-8 ACATAT 3R 4436318 4436323 - 3R_4436318_4436323_- 1 1 1 0 CG9804 FBtr0078943|FBtr0346735 4436220|4436220 4436402|4436402 3R - 4436290 4436324 3'utr CG9804 FlyBase G47858.1 TACATATTTCCTGGCCTTCTGTTATCTCAACTTTT 17 4436304 0.653307467 6 16 159 1 1.322219295 0.19047619 0.176470588 0.333333333 17 0 0 21 3R:4436290-4436324 6 CG9804 FBtr0078943|FBtr0346735 4436220|4436220 4436402|4436402 ACATAT 6mer3-8 dme-miR-190-5p 3R - 4436291 4436326 3'utr CG9804 FlyBase G36102.1 AATACATATTTCCTGGCCTTCTGTTATCTCAACTTT 8 4436304 0.623492708 5 8 68 1 1.041392685 0 0.375 0.545454545 8 0 0 11 3R:4436291-4436326 6 3 4627 FBgn0037251 205.3333333 26.91 41.03666667 0.01461039 0.11148272 0.073105353 -19 -19 -19 0.01 dme-miR-932-5p 6mer2-7 GAATTG 3R 4441103 4441108 + 3R_4441103_4441108_+ 1 1 1 0 CG14650 FBtr0078926 4440851 4441328 3R + 4441093 4441141 3'utr CG14650 FlyBase G40024.2 TTGACACATTGAATTGTAAAATTGCCTTCCACTACATCTATGTTTTAAT 72 4441115 0.813037567 7 66 554 0.916666667 1.886490725 0.047619048 0.166666667 0.285714286 72 7 0 77 3R:4441093-4441141 6 CG14650 FBtr0078926 4440851 4441328 GAATTG 6mer2-7 dme-miR-932-5p 3R + 4441022 4441257 3'utr CG14650 FlyBase G30234.1 AGTTGTATGTTTTTTAGTTCAAAGGCCATATCAACTCTTGGAGCTGGTTTGATTTCATTACGTGACGTTTTTTGACACATTGAATTGTAAAATTGCCTTCCACTACATCTATGTTTTAATATTTTGTTTTTGCTCCCTCTTCGACGGCCAGCTTGTCACACGTAGTTCTTAGCATAAGCTTTAGTTCTAAGTTCTAACTTTACTATTTTCATAAATTTTTAAGCAAATGCGACGGC 95 4441115 0.766979754 28 86 734 0.935251799 1.511883361 0.079136691 0.347368421 0.553956835 95 6 3 130 3R:4441022-4441257 6 55 4628 FBgn0037252 788.0033333 26.22 40.13666667 0.069796659 2.097635393 1.37031808 -12 -12 -12 0.01 dme-miR-79-3p 6mer2-7 AGCTTT 3R 4465433 4465438 - 3R_4465433_4465438_- 1 1 1 0 CG31523 FBtr0078938|FBtr0078935|FBtr0335430|FBtr0335429|FBtr0078937|FBtr0345142|FBtr0078936 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 3R - 4465419 4465571 3'utr CG31523 FlyBase G47867.1 TCAGCGCAGTGAGAAGTATTGGTGACAAATTATTTGTAAGTGTAATTCTGTCTGTTAATCCGTGCGTATGGTTTCGTTGTTAGATTATGTGGCTTAAGCTGACAAGTTCAAAAACTATAGAAAACCTAAATAAAGCTTTTTAATTTATATTAA 58 4465432 0.984281754 19 56 448 0.970588235 1.819543936 0.205882353 0.155172414 0.279411765 58 2 0 66 3R:4465419-4465571 6 CG31523 FBtr0335429|FBtr0335430|FBtr0078935|FBtr0078938|FBtr0078936|FBtr0345142|FBtr0078937 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 AGCTTT 6mer2-7 dme-miR-79-3p 3R - 4465418 4465571 3'utr CG31523 FlyBase G36112.1 TCAGCGCAGTGAGAAGTATTGGTGACAAATTATTTGTAAGTGTAATTCTGTCTGTTAATCCGTGCGTATGGTTTCGTTGTTAGATTATGTGGCTTAAGCTGACAAGTTCAAAAACTATAGAAAACCTAAATAAAGCTTTTTAATTTATATTAAA 39 4465432 0.987187196 17 35 313 0.951612903 1.469822016 0.193548387 0.384615385 0.612903226 39 2 1 59 3R:4465418-4465571 6 16.5 4629 FBgn0051523 3326.983333 148.2633333 227.5733333 0.004959448 0.111288473 0.072504101 -6 -6 -6 0.01 dme-miR-79-3p 6mer2-7 AGCTTT 3R 4465781 4465786 - 3R_4465781_4465786_- 1 0.999253998 0.999626999 0.000527502 CG31523 FBtr0078938|FBtr0078935|FBtr0335430|FBtr0335429|FBtr0078937|FBtr0345142|FBtr0078936 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 3R - 4465750 4465802 3'utr CG31523 FlyBase G47868.1 AAGATCATGGAGATAAAGCTTTTATACTGTAAGTGCAAACCGGCTTAAGGACG 8 4465781 0.982255773 5 8 62 1 0.903089987 0.25 0 0 8 0 0 8 3R:4465750-4465802 6 CG31523 FBtr0335429|FBtr0335430|FBtr0078935|FBtr0078938|FBtr0078936|FBtr0345142|FBtr0078937 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 AGCTTT 6mer2-7 dme-miR-79-3p 3R - 4465745 4465812 3'utr CG31523 FlyBase G36113.1 AAGAGTGACAAAGATCATGGAGATAAAGCTTTTATACTGTAAGTGCAAACCGGCTTAAGGACGAAGAC 8 4465773 0.974210484 6 7 46 0.9 0.954242509 0.2 0.25 0.4 8 1 0 9 3R:4465745-4465812 6 6 4630 FBgn0051523 3326.983333 148.2633333 227.5733333 0.001803436 0.040468536 0.026365128 -5 -13 -9 0.01 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA 3R 4466612 4466619 - 3R_4466612_4466619_- 0.627007348 0.627007348 0.627007348 0 CG31523 FBtr0078938|FBtr0078935|FBtr0335430|FBtr0335429|FBtr0078937|FBtr0345142|FBtr0078936 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 3R - 4466553 4466817 stop_codon CG31523 FlyBase G47873.1 AAGCAAGGGGCAATCGAATGGTGCCTACAAGGAGGGCTTCTTCAAGGAGGGCGTGTTATCCAACAACGATGCCATCTTCAACCCGGACAGCAGTAGTTCTAGTCTGCACCAGCGCAAAGTCAAATAACTGCTGATTAGGTGTACTACGATGATATTCATTATGTTTATGTTAAGTGATTAGCGTGTAACTGAACCAGATTGAAGAACAAGACGAGCAAGAAACTTGGCAGAAGTAGCAGAAGACGATTGGCACGACAGCAGCGAA 410 4466619 0.96314446 35 384 1963 0.936440678 1.800324229 0.177966102 0.136585366 0.25 410 24 6 442 3R:4466553-4466817 8 CG31523 FBtr0335429|FBtr0335430|FBtr0078935|FBtr0078938|FBtr0078936|FBtr0345142|FBtr0078937 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p 3R - 4466554 4466756 stop_codon CG31523 FlyBase G36118.1 AACAACGATGCCATCTTCAACCCGGACAGCAGTAGTTCTAGTCTGCACCAGCGCAAAGTCAAATAACTGCTGATTAGGTGTACTACGATGATATTCATTATGTTTATGTTAAGTGATTAGCGTGTAACTGAACCAGATTGAAGAACAAGACGAGCAAGAAACTTGGCAGAAGTAGCAGAAGACGATTGGCACGACAGCAGCGA 267 4466619 0.961991588 27 239 1210 0.894484412 1.45776548 0.189448441 0.4082397 0.621103118 267 32 12 373 3R:4466554-4466756 8 96 4631 FBgn0051523 3326.983333 148.2633333 227.5733333 0.028854969 0.647496571 0.421842044 0 0 0 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 4492581 4492586 - 3R_4492581_4492586_- 1 1 1 0 CG34357 FBtr0303867|FBtr0335239 4492524|4491941 4493403|4493403 3R - 4492568 4492602 3'utr CG34357 FlyBase G47888.1 GACATGGGTAGATTGCTGATCTTAATAAAATATTA 23 4492587 0.724694815 5 22 184 0.962962963 1.113943352 0.37037037 0.173913043 0.296296296 23 0 1 26 3R:4492568-4492602 6 CG34357 FBtr0335239|FBtr0303867 4491941|4492524 4493403|4493403 TGATCT 6mer3-8 dme-bantam-3p 3R - 4492562 4492609 3'utr CG34357 FlyBase G36129.1 GGCTGACGACATGGGTAGATTGCTGATCTTAATAAAATATTATTATTT 14 4492587 0.985948719 6 13 111 0.947368421 1.255272505 0.473684211 0.285714286 0.473684211 14 1 0 18 3R:4492562-4492609 6 18.5 4632 FBgn0085386 22.73666667 0.763333333 1.17 0.813663686 24.23580786 15.81196581 1 1 1 0.01 dme-miR-278-3p 6mer2-7 CCACCG 3R 4638240 4638245 - 3R_4638240_4638245_- 1 1 1 0 CG9775 FBtr0078895|FBtr0078894|FBtr0301297|FBtr0336457 4638008|4638008|4638008|4638008 4638308|4638308|4638430|4638308 3R - 4638187 4638285 3'utr CG9775 FlyBase G47906.1 CTATTGAATTAAAAACAATTGAATGAACAGAATGTAACAACCACCGGCTATAGGCAGATGTTTCTCTCGTTGCACTAAGTTACCGCCTAGTTTTAAAAT 34 4638220 0.978381004 14 33 223 0.97826087 1.653212514 0.130434783 0.235294118 0.434782609 34 1 0 45 3R:4638187-4638285 6 CG9775 FBtr0301297|FBtr0336457|FBtr0078895|FBtr0078894 4638008|4638008|4638008|4638008 4638430|4638308|4638308|4638308 CCACCG 6mer2-7 dme-miR-278-3p 3R - 4638206 4638269 3'utr CG9775 FlyBase G36141.1 AATTGAATGAACAGAATGTAACAACCACCGGCTATAGGCAGATGTTTCTCTCGTTGCACTAAGT 29 4638226 0.870195951 9 26 194 0.86 1.156347201 0.04 0.517241379 0.72 29 5 2 43 3R:4638206-4638269 6 15.5 4633 FBgn0037261 1038.666667 62.08666667 94.64333333 0.014922978 0.249651025 0.163772761 -25 -19 -22 0.01 dme-miR-8-3p 6mer3-8 CAGTAT 3R 4638351 4638356 - 3R_4638351_4638356_- 1 1 1 0 CG9775 FBtr0301297 4638008 4638430 3R - 4638310 4638388 stop_codon CG9775 FlyBase G47907.1 TTAAGCGCGAGGATCTTGACATGGAACTGGATCAGTATATGTCCACCACTAAGTCGGAGATGGACTACTTGCTGAAGTA 25 4638357 0.964787478 9 23 142 0.928571429 1.414973348 0.142857143 0.04 0.142857143 25 2 0 26 3R:4638310-4638388 6 CG9775 FBtr0301297 4638008 4638430 CAGTAT 6mer3-8 dme-miR-8-3p 3R - 4638312 4638385 3'utr CG9775 FlyBase G36142.1 AGCGCGAGGATCTTGACATGGAACTGGATCAGTATATGTCCACCACTAAGTCGGAGATGGACTACTTGCTGAAG 16 4638357 0.922163559 5 14 90 0.95 1.278753601 0.15 0.25 0.4 16 1 0 19 3R:4638312-4638385 6 13.5 4634 FBgn0037261 1038.666667 62.08666667 94.64333333 0.012997433 0.21743799 0.142640792 1 1 1 0.01 dme-miR-12-5p 6mer3-8 AATACT 3R 4644659 4644664 - 3R_4644659_4644664_- 1 0.701523856 0.850761928 0.211054474 Dip2 FBtr0078893 4644647 4644783 3R - 4644644 4644677 3'utr Dip2 FlyBase G47914.1 TACTTGGAGAATAAATACTGATAAATATTAATTA 29 4644665 0.881629115 4 27 216 0.939393939 1.491361694 0.272727273 0.137931034 0.242424242 29 2 0 31 3R:4644644-4644677 6 Dip2 FBtr0078893 4644647 4644783 AATACT 6mer3-8 dme-miR-12-5p 3R - 4644644 4644684 3'utr Dip2 FlyBase G36147.1 TTTATTATACTTGGAGAATAAATACTGATAAATATTAATTA 10 4644664 0.754319206 4 9 74 0.875 1.146128036 0.5 0.5 0.6875 10 2 0 14 3R:4644644-4644684 6 19.5 4635 FBgn0040466 185 25.7 39.05333333 0.105405405 0.758754864 0.499317173 1 0 0.5 0.01 dme-miR-1006-3p 6mer3-8 CGAATT 3R 4644708 4644713 - 3R_4644708_4644713_- 0.507200502 0.507200502 0.507200502 0 Dip2 FBtr0078893 4644647 4644783 3R - 4644681 4644726 3'utr Dip2 FlyBase G47915.1 TAAAAGCACCTGACGAATTGGGAAACAAACCTAATAATTTATTTTA 28 4644709 0.743928047 4 27 102 1 1.477121255 0 0.035714286 0.1 28 0 0 30 3R:4644681-4644726 6 Dip2 FBtr0078893 4644647 4644783 CGAATT 6mer3-8 dme-miR-1006-3p 3R - 4644689 4644726 3'utr Dip2 FlyBase G36148.1 TAAAAGCACCTGACGAATTGGGAAACAAACCTAATAAT 15 4644709 0.7226334 2 14 47 0.92 0.884606581 0 0.466666667 0.68 15 0 2 23 3R:4644689-4644726 6 21 4636 FBgn0040466 185 25.7 39.05333333 0.113513514 0.817120623 0.537726186 -4 -4 -4 0.01 dme-miR-970-3p 6mer2-7 CTTATG 3R 4734938 4734943 - 3R_4734938_4734943_- 1 1 1 0 tacc FBtr0089951|FBtr0306654|FBtr0302613|FBtr0089949|FBtr0089955|FBtr0089952|FBtr0302616|FBtr0089950|FBtr0302614|FBtr0332446|FBtr0089953|FBtr0302615 4734410|4734410|4733652|4734410|4734410|4734410|4733652|4734410|4734410|4734410|4734410|4734410 4735150|4735150|4735150|4735150|4735150|4735150|4735150|4735150|4735150|4735150|4735150|4735150 3R - 4734927 4735073 3'utr tacc FlyBase G47923.1 TGGCATATGGAGCCTTTCCAGAAAGCAGCATGTCCGTAGATCTGTAACTGCGCTACCATCGTCGTCATCTCCATTTCTGTAATGGTTTAATAACCGCTCGGCTGCGTGCTCTTTACTGATTAAGAAAATGCTTATGCACAACTGTAT 72 4734970 0.799909444 20 70 509 0.956989247 1.949390007 0.11827957 0.222222222 0.397849462 72 4 0 89 3R:4734927-4735073 6 tacc FBtr0089952|FBtr0302615|FBtr0089955|FBtr0302614|FBtr0089950|FBtr0332446|FBtr0089953|FBtr0302616|FBtr0089951|FBtr0306654|FBtr0302613|FBtr0089949 4734410|4734410|4734410|4734410|4734410|4734410|4734410|4733652|4734410|4734410|4733652|4734410 4735150|4735150|4735150|4735150|4735150|4735150|4735150|4735150|4735150|4735150|4735150|4735150 CTTATG 6mer2-7 dme-miR-970-3p 3R - 4734935 4735062 3'utr tacc FlyBase G36160.1 GCCTTTCCAGAAAGCAGCATGTCCGTAGATCTGTAACTGCGCTACCATCGTCGTCATCTCCATTTCTGTAATGGTTTAATAACCGCTCGGCTGCGTGCTCTTTACTGATTAAGAAAATGCTTATGCAC 37 4734970 0.983489215 13 35 254 0.964285714 1.73239376 0.232142857 0.378378378 0.589285714 37 2 0 54 3R:4734935-4735062 6 5.5 4637 FBgn0026620 3806.433333 181.6566667 279.3266667 0.001444922 0.030276896 0.019690207 27 27 27 0.01 dme-miR-980-5p 8mer-m1 GAAAAACT 3R 4786579 4786586 - 3R_4786579_4786586_- 0.607906106 0.607906106 0.607906106 0 ctrip FBtr0334903|FBtr0334902|FBtr0344029 4786282|4786282|4786282 4787826|4787826|4787826 3R - 4786548 4786721 3'utr ctrip FlyBase G47947.1 TGTATAACTTCTATTGTACTTGATGCATACGCATACGAAAGAGAACAGAATGCTGGTAATAAAAATTGATTAACATTTAAACCGAGAAGCGAAATCGATCTTACATTAAAACTAGATACAAATCTTTGCAGTACTGAAAAACTGATTACAGACATGTGGTATATATACATATAA 56 4786576 0.975718129 22 52 323 0.943661972 1.525044807 0.183098592 0.178571429 0.352112676 56 3 1 67 3R:4786548-4786721 8 ctrip FBtr0344029|FBtr0334902|FBtr0334903 4786282|4786282|4786282 4787826|4787826|4787826 GAAAAACT 8mer-m1 dme-miR-980-5p 3R - 4786545 4786602 3'utr ctrip FlyBase G36173.1 AAATCTTTGCAGTACTGAAAAACTGATTACAGACATGTGGTATATATACATATAACTT 21 4786577 0.779210138 9 20 149 0.96875 1.190331698 0 0.380952381 0.59375 21 0 1 31 3R:4786545-4786602 8 20.5 4638 FBgn0260794 5155.516667 58.3 89.56666667 0.003976323 0.351629503 0.228879792 -10 -9 -9.5 0.01 dme-miR-252-5p 6mer3-8 GTACTT 3R 4786701 4786706 - 3R_4786701_4786706_- 0.999968752 1 0.999984376 2.21E-05 ctrip FBtr0334903|FBtr0334902|FBtr0344029 4786282|4786282|4786282 4787826|4787826|4787826 3R - 4786548 4786721 3'utr ctrip FlyBase G47947.1 TGTATAACTTCTATTGTACTTGATGCATACGCATACGAAAGAGAACAGAATGCTGGTAATAAAAATTGATTAACATTTAAACCGAGAAGCGAAATCGATCTTACATTAAAACTAGATACAAATCTTTGCAGTACTGAAAAACTGATTACAGACATGTGGTATATATACATATAA 56 4786707 0.975718129 22 52 323 0.943661972 1.525044807 0.183098592 0.178571429 0.352112676 56 3 1 67 3R:4786548-4786721 6 ctrip FBtr0344029|FBtr0334902|FBtr0334903 4786282|4786282|4786282 4787826|4787826|4787826 GTACTT 6mer3-8 dme-miR-252-5p 3R - 4786693 4786721 3'utr ctrip FlyBase G36175.1 TGTATAACTTCTATTGTACTTGATGCATA 7 4786707 0.699260787 3 7 67 1 1 0 0.285714286 0.5 7 0 0 10 3R:4786693-4786721 6 7 4639 FBgn0260794 5155.516667 58.3 89.56666667 0.001357769 0.120068611 0.078154075 1 1 1 0.01 dme-miR-2a-2-5p 7mer-A1 GATGAGA 3R 4786873 4786879 - 3R_4786873_4786879_- 0.782911824 0.782911824 0.782911824 0 ctrip FBtr0334903|FBtr0334902|FBtr0344029 4786282|4786282|4786282 4787826|4787826|4787826 3R - 4786817 4786912 3'utr ctrip FlyBase G47948.1 AAATGCCATCATTGGGTGTATGTTTAATTAAAGGATGAGAAATGGATTAAGGGAAAGCGGACAAAACGAAGTTTGTGTTTAGTACACATCCCCTTT 48 4786870 0.938923365 5 47 189 0.962962963 1.716003344 0.055555556 0.125 0.222222222 48 2 0 52 3R:4786817-4786912 7 ctrip FBtr0344029|FBtr0334902|FBtr0334903 4786282|4786282|4786282 4787826|4787826|4787826 GATGAGA 7mer-A1 dme-miR-2a-2-5p 3R - 4786847 4786909 3'utr ctrip FlyBase G36176.1 TGCCATCATTGGGTGTATGTTTAATTAAAGGATGAGAAATGGATTAAGGGAAAGCGGACAAAA 28 4786870 0.936654791 4 28 110 1 1.591064607 0.102564103 0.285714286 0.487179487 28 0 0 39 3R:4786847-4786909 7 33 4640 FBgn0260794 5155.516667 58.3 89.56666667 0.00640091 0.566037736 0.36844064 -9 -9 -9 0.01 dme-miR-965-3p 7mer-A1 ACGCTTA 3R 4787182 4787188 - 3R_4787182_4787188_- 0.823349562 0.823349562 0.823349562 0 ctrip FBtr0301437|FBtr0303914|FBtr0344030|FBtr0334903|FBtr0303911|FBtr0303917|FBtr0303915|FBtr0303912|FBtr0334902|FBtr0344028|FBtr0344029 4787043|4787043|4787043|4786282|4787043|4787043|4787043|4787043|4786282|4787043|4786282 4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826 3R - 4787125 4787217 3'utr ctrip FlyBase G47951.1 AATTATTTGTAAGCATACAATGTGCATAAACGCTTATTAGAAAGAAACGTGAATGAAAATACAATGAAGGGGAAACACTGAAGCATTGGAGGT 125 4787181 0.892332085 13 119 664 0.972789116 2.155336037 0.142857143 0.152 0.278911565 125 4 0 143 3R:4787125-4787217 7 ctrip FBtr0344029|FBtr0344028|FBtr0334902|FBtr0303915|FBtr0303912|FBtr0303917|FBtr0303911|FBtr0334903|FBtr0344030|FBtr0303914|FBtr0301437 4786282|4787043|4786282|4787043|4787043|4787043|4787043|4786282|4787043|4787043|4787043 4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826 ACGCTTA 7mer-A1 dme-miR-965-3p 3R - 4787126 4787207 3'utr ctrip FlyBase G36179.1 AAGCATACAATGTGCATAAACGCTTATTAGAAAGAAACGTGAATGAAAATACAATGAAGGGGAAACACTGAAGCATTGGAGG 76 4787181 0.889613743 8 71 391 0.943396226 2 0.20754717 0.355263158 0.537735849 76 6 0 100 3R:4787126-4787207 7 77.5 4641 FBgn0260794 5155.516667 58.3 89.56666667 0.015032441 1.329331046 0.865277261 -7 -7 -7 0.01 dme-miR-980-5p 8mer-m1 GAAAAACT 3R 4815895 4815902 + 3R_4815895_4815902_+ 0.607906106 0.607906106 0.607906106 0 CG1129 FBtr0345174|FBtr0078871 4815686|4815686 4816025|4816025 3R + 4815865 4815979 3'utr CG1129 FlyBase G40104.1 CCAGCTCTTTCTCCTTCCCTGGCGAAGGGGGAAAAACTGACTTATAGTTTAAGCTTAATCGCGTTAGTTGAACGTTTTTGTACTTTGATAAGCGAAGCATTAGTTATACTCCTAA 42 4815902 0.983709699 11 42 275 1 1.698970004 0.18 0.19047619 0.32 42 0 0 50 3R:4815865-4815979 8 CG1129 FBtr0345174|FBtr0078871 4815686|4815686 4816025|4816025 GAAAAACT 8mer-m1 dme-miR-980-5p 3R + 4815867 4815920 3'utr CG1129 FlyBase G30307.1 AGCTCTTTCTCCTTCCCTGGCGAAGGGGGAAAAACTGACTTATAGTTTAAGCTT 21 4815902 0.97513344 2 20 118 0.931034483 1.431363764 0.137931034 0.285714286 0.482758621 21 2 0 27 3R:4815867-4815920 8 25.5 4642 FBgn0037279 833.0633333 60.27333333 92.65 0.030609918 0.423072669 0.275229358 -7 -7 -7 0.01 dme-miR-8-3p 7mer-A1 AGTATTA 3R 4818685 4818691 - 3R_4818685_4818691_- 0.823349562 0.823349562 0.823349562 0 CG14657 FBtr0334901|FBtr0078875|FBtr0334900 4818273|4818539|4817978 4820262|4819106|4819106 3R - 4818665 4818712 3'utr CG14657 FlyBase G48022.1 TTTAACCCTCATTGAGCAAAAAGTATTAAATGTATAAAGAAACTAGTT 12 4818701 0.987402577 5 7 77 0.583333333 0.84509804 0.166666667 0 0 12 5 0 7 3R:4818665-4818712 7 CG14657 FBtr0334900|FBtr0078875|FBtr0334901 4817978|4818539|4818273 4819106|4819106|4820262 AGTATTA 7mer-A1 dme-miR-8-3p 3R - 4818675 4818739 3'utr CG14657 FlyBase G36239.1 GATACAAAATGATATATGCAAAAGAAATTTAACCCTCATTGAGCAAAAAGTATTAAATGTATAAA 7 4818701 0.967854345 6 7 43 1 1.041392685 0.454545455 0.428571429 0.636363636 7 0 0 11 3R:4818675-4818739 7 6.5 4643 FBgn0037282 892.63 37.31666667 57.47333333 0.007281853 0.174184904 0.113095929 10 10 10 0.01 dme-miR-14-3p 8mer-A1 AAGACTGA 3R 4818773 4818780 - 3R_4818773_4818780_- 0.643564081 0.643531421 0.643547751 2.31E-05 CG14657 FBtr0334901|FBtr0078875|FBtr0334900 4818273|4818539|4817978 4820262|4819106|4819106 3R - 4818759 4818805 3'utr CG14657 FlyBase G48023.1 ATTACAGAATTCTGGCTTGGTCTTCAAGACTGATATAACAAAAAGCA 76 4818784 0.640526233 9 67 599 0.862068966 1.875061263 0.149425287 0.131578947 0.24137931 76 12 0 75 3R:4818759-4818805 8 CG14657 FBtr0334900|FBtr0078875|FBtr0334901 4817978|4818539|4818273 4819106|4819106|4820262 AAGACTGA 8mer-A1 dme-miR-14-3p 3R - 4818747 4818803 3'utr CG14657 FlyBase G36240.1 TACAGAATTCTGGCTTGGTCTTCAAGACTGATATAACAAAAAGCATCCGCTACGAAT 45 4818784 0.933472837 9 41 351 0.930555556 1.525044807 0.194444444 0.4 0.625 45 4 1 67 3R:4818747-4818803 8 56 4644 FBgn0037282 892.63 37.31666667 57.47333333 0.06273596 1.500669942 0.974364923 4 4 4 0.01 dme-miR-184-5p 6mer2-7 GATAAG 3R 4818915 4818920 - 3R_4818915_4818920_- 1 1 1 0 CG14657 FBtr0334901|FBtr0078875|FBtr0334900 4818273|4818539|4817978 4820262|4819106|4819106 3R - 4818871 4818959 3'utr CG14657 FlyBase G48024.1 ACGTAATACATATTTCCGTTGAAGTAGGTGGAAATGTAAGATAAGCCAGTAATCATGTAAAGTACACGTAGTGTTCAACTCGTTTCGTA 31 4818925 0.959341189 5 30 138 0.972222222 1.544068044 0.277777778 0.129032258 0.25 31 1 0 35 3R:4818871-4818959 6 CG14657 FBtr0334900|FBtr0078875|FBtr0334901 4817978|4818539|4818273 4819106|4819106|4820262 GATAAG 6mer2-7 dme-miR-184-5p 3R - 4818906 4818947 3'utr CG14657 FlyBase G36241.3 TTTCCGTTGAAGTAGGTGGAAATGTAAGATAAGCCAGTAATC 23 4818924 0.820315852 6 23 104 1 1.544068044 0.257142857 0.434782609 0.628571429 23 0 0 35 3R:4818906-4818947 6 24 4645 FBgn0037282 892.63 37.31666667 57.47333333 0.02688684 0.643144261 0.417584967 5 4 4.5 0.01 dme-miR-14-3p 7mer-A1 AGACTGA 3R 4938248 4938254 + 3R_4938248_4938254_+ 0.823349562 0.823349562 0.823349562 0 Cdep FBtr0336812 4938074 4940218 3R + 4938232 4938258 3'utr Cdep FlyBase G40137.1 AACTTATTTGTAACTGAGACTGATTTA 6 4938243 0.694031952 4 6 52 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3R:4938232-4938258 7 Cdep FBtr0336812 4938074 4940218 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 4938237 4938267 3'utr Cdep FlyBase G30329.1 ATTTGTAACTGAGACTGATTTACGACTAACA 7 4938246 0.827758969 4 7 50 1 1.079181246 0 0.428571429 0.666666667 7 0 0 12 3R:4938237-4938267 7 6.5 4646 FBgn0265082 2047.223333 54.77333333 83.9 0.003175032 0.118670886 0.077473182 5 2 3.5 0.01 dme-miR-1006-3p 6mer2-7 GAATTT 3R 4945273 4945278 + 3R_4945273_4945278_+ 1 1 1 0 Cdep FBtr0336809|FBtr0336811 4945052|4945052 4945576|4945576 3R + 4945243 4945274 3'utr Cdep FlyBase G40150.1 TTCTATGTCCTATTATGGCCGGTTTATAGTGA 16 4945258 0.785191854 4 16 145 1 1.230448921 0.352941176 0.0625 0.117647059 16 0 0 17 3R:4945243-4945274 2 Cdep FBtr0336809|FBtr0336811 4945052|4945052 4945576|4945576 GAATTT 6mer2-7 dme-miR-1006-3p 3R + 4945244 4945307 3'utr Cdep FlyBase G30336.1 TCTATGTCCTATTATGGCCGGTTTATAGTGAATTTGTATATAATGACTTTGTCGGTGTGTTCGT 18 4945258 0.775205257 7 18 183 1 1.322219295 0.19047619 0.166666667 0.285714286 18 0 0 21 3R:4945244-4945307 6 4.5 4647 FBgn0265082 2047.223333 54.77333333 83.9 0.002198099 0.082156767 0.05363528 15 15 15 0.01 dme-miR-932-5p 6mer3-8 GGAATT 3R 4948834 4948839 - 3R_4948834_4948839_- 0.591720885 0.591720885 0.591720885 0 Ubc6 FBtr0078849 4948753 4950278 3R - 4948764 4948875 3'utr Ubc6 FlyBase G48033.1 CAAAGAATGAGGATTAGCAACCGATTCAGACAATGTGGAATTTCAAATTACCTTACTGTAATTAACATTATTATTATTAATAAAGTTAAGATTTCCAATATCAATAAATGAA 31 4948828 0.983629946 9 30 235 0.971428571 1.531478917 0.4 0.129032258 0.228571429 31 1 0 34 3R:4948764-4948875 6 Ubc6 FBtr0078849 4948753 4950278 GGAATT 6mer3-8 dme-miR-932-5p 3R - 4948812 4948867 3'utr Ubc6 FlyBase G36248.1 GAGGATTAGCAACCGATTCAGACAATGTGGAATTTCAAATTACCTTACTGTAATTA 15 4948828 0.802450014 5 14 103 1 1.301029996 0.45 0.266666667 0.45 15 0 0 20 3R:4948812-4948867 6 16 4648 FBgn0004436 1251.333333 113.3 174.1066667 0.012786361 0.141218005 0.091897687 -11 -11 -11 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3R 4949006 4949011 - 3R_4949006_4949011_- 0.999991279 1 0.999995639 6.15E-06 Ubc6 FBtr0078849 4948753 4950278 3R - 4948987 4949203 3'utr Ubc6 FlyBase G48034.1 AGTGTAAAGTGGGATGAAAACATCTCCTAACTGCCATTTGCCACGCTATGTACTCTCTAGGTTCCACTGTGTCTTGGCTGCGGCAATTGATTTAGTTAGTTCTTAAGCGTTTACAATCGACTTTTATTCATGTTTTTTGTTGAATGCGAATTGCTGTACCTTTTGCTATAAACCCTCCACTTTTTGGCACTTTGTGTTGGATGCTCTGAGCATCATG 59 4949041 0.867992338 27 59 499 1 1.838849091 0.333333333 0.169491525 0.289855072 59 0 0 69 3R:4948987-4949203 6 Ubc6 FBtr0078849 4948753 4950278 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 4948985 4949065 3'utr Ubc6 FlyBase G36249.1 GTTGAATGCGAATTGCTGTACCTTTTGCTATAAACCCTCCACTTTTTGGCACTTTGTGTTGGATGCTCTGAGCATCATGTT 24 4949011 0.713475688 10 23 218 0.973684211 1.568201724 0.342105263 0.375 0.605263158 24 1 0 37 3R:4948985-4949065 6 9.5 4649 FBgn0004436 1251.333333 113.3 174.1066667 0.007591902 0.083848191 0.054564252 30 0 15 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 4949043 4949048 - 3R_4949043_4949048_- 0.999997863 1 0.999998931 1.48E-06 Ubc6 FBtr0078849 4948753 4950278 3R - 4948987 4949203 3'utr Ubc6 FlyBase G48034.1 AGTGTAAAGTGGGATGAAAACATCTCCTAACTGCCATTTGCCACGCTATGTACTCTCTAGGTTCCACTGTGTCTTGGCTGCGGCAATTGATTTAGTTAGTTCTTAAGCGTTTACAATCGACTTTTATTCATGTTTTTTGTTGAATGCGAATTGCTGTACCTTTTGCTATAAACCCTCCACTTTTTGGCACTTTGTGTTGGATGCTCTGAGCATCATG 59 4949041 0.867992338 27 59 499 1 1.838849091 0.333333333 0.169491525 0.289855072 59 0 0 69 3R:4948987-4949203 6 Ubc6 FBtr0078849 4948753 4950278 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 4948985 4949065 3'utr Ubc6 FlyBase G36249.1 GTTGAATGCGAATTGCTGTACCTTTTGCTATAAACCCTCCACTTTTTGGCACTTTGTGTTGGATGCTCTGAGCATCATGTT 24 4949041 0.713475688 10 23 218 0.973684211 1.568201724 0.342105263 0.375 0.605263158 24 1 0 37 3R:4948985-4949065 6 14.5 4650 FBgn0004436 1251.333333 113.3 174.1066667 0.01158764 0.127978817 0.083282279 -7 -7 -7 0.01 dme-miR-965-3p 6mer2-7 ACGCTT 3R 4949311 4949316 - 3R_4949311_4949316_- 1 1 1 0 Ubc6 FBtr0078849 4948753 4950278 3R - 4949305 4949330 3'utr Ubc6 FlyBase G48035.1 TTGGTGGCTGACCGACGCTTTACTTT 7 4949311 0.679543248 3 7 34 1 0.954242509 0.777777778 0.285714286 0.444444444 7 0 0 9 3R:4949305-4949330 6 Ubc6 FBtr0078849 4948753 4950278 ACGCTT 6mer2-7 dme-miR-965-3p 3R - 4949302 4949363 3'utr Ubc6 FlyBase G36252.1 TGACCAATGCTCTATGTATTTTGCCCGATAATTTTGGTGGCTGACCGACGCTTTACTTTTAC 11 4949311 0.775046964 6 9 76 0.923076923 0.77815125 0.307692308 0.181818182 0.307692308 11 0 1 12 3R:4949302-4949363 6 6 4651 FBgn0004436 1251.333333 113.3 174.1066667 0.004794885 0.052956752 0.034461633 -5 -5 -5 0.01 dme-miR-1006-3p 6mer3-8 CGAATT 3R 4949526 4949531 - 3R_4949526_4949531_- 0.8771962 0.999991335 0.938593767 0.086829248 Ubc6 FBtr0078849 4948753 4950278 3R - 4949478 4949614 3'utr Ubc6 FlyBase G48037.1 TAAACAATTGTCCAGTGTCGTCATTTATGTGAACTATATGTATCTACCAAACCCCAACATAAACATACACATGCTACCTAGATCGAATTATAAGTTTATTGGCTACAAATTGTGAAATTACTAGAAATTGATAATTA 125 4949543 0.970347257 13 121 708 0.964788732 1.835690571 0.035211268 0.112 0.218309859 125 4 1 137 3R:4949478-4949614 6 Ubc6 FBtr0078849 4948753 4950278 CGAATT 6mer3-8 dme-miR-1006-3p 3R - 4949479 4949589 3'utr Ubc6 FlyBase G36254.1 TATGTGAACTATATGTATCTACCAAACCCCAACATAAACATACACATGCTACCTAGATCGAATTATAAGTTTATTGGCTACAAATTGTGAAATTACTAGAAATTGATAATT 89 4949543 0.9602041 10 86 497 0.970588235 1.819543936 0.036764706 0.348314607 0.573529412 89 3 1 132 3R:4949479-4949589 6 67.5 4652 FBgn0004436 1251.333333 113.3 174.1066667 0.053942461 0.59576346 0.387693368 12 12 12 0.01 dme-miR-970-3p 6mer3-8 TCTTAT 3R 4949862 4949867 - 3R_4949862_4949867_- 0.979860991 1 0.989930495 0.014240423 Ubc6 FBtr0078849|FBtr0306106 4948753|4949777 4950278|4950278 3R - 4949832 4949917 3'utr Ubc6 FlyBase G48038.1 AGTCCTCTATGGATGCAGCCGCTAGTTGCGCCGGCAGCCAGAAATAAGACTCTTATAAGCTAAAAACTCAAATGTTCTAATTTAAA 32 4949864 0.963500145 10 29 149 0.885714286 1.190331698 0.085714286 0.09375 0.171428571 32 3 1 31 3R:4949832-4949917 6 Ubc6 FBtr0078849|FBtr0306106 4948753|4949777 4950278|4950278 TCTTAT 6mer3-8 dme-miR-970-3p 3R - 4949854 4949921 3'utr Ubc6 FlyBase G36255.1 AGGAAGTCCTCTATGGATGCAGCCGCTAGTTGCGCCGGCAGCCAGAAATAAGACTCTTATAAGCTAAA 29 4949865 0.652342985 9 27 133 0.947368421 1.255272505 0.184210526 0.24137931 0.421052632 29 1 1 36 3R:4949854-4949921 6 24 4653 FBgn0004436 1251.333333 113.3 174.1066667 0.019179542 0.211827008 0.137846531 -3 -2 -2.5 0.01 dme-miR-980-3p 6mer3-8 GGCAGC 3R 4950216 4950221 - 3R_4950216_4950221_- 1 1 1 0 Ubc6 FBtr0078849|FBtr0306106 4948753|4949777 4950278|4950278 3R - 4950086 4950232 3'utr Ubc6 FlyBase G48040.1 ACAAAACGAGCGGCAGCAGTTTAGTAGGCGACCGCAGCTTAAAGCATCAGCAAACTACAGTAACAGAAATATGCAATACCATAAAGAAGTTTAAATTAAATAATAACAGAAATATTTATGATAATTGTAATGCTATGAAATTGTAAC 16 4950212 0.973137 9 13 79 0.65 1.113943352 0.3 0.0625 0.25 16 7 0 13 3R:4950086-4950232 6 Ubc6 FBtr0078849|FBtr0306106 4948753|4949777 4950278|4950278 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 4950162 4950228 3'utr Ubc6 FlyBase G36257.1 AACGAGCGGCAGCAGTTTAGTAGGCGACCGCAGCTTAAAGCATCAGCAAACTACAGTAACAGAAATA 6 4950212 0.958531937 3 5 19 0.8 0.903089987 0 0.666666667 0.8 6 2 0 8 3R:4950162-4950228 6 4 4654 FBgn0004436 1251.333333 113.3 174.1066667 0.00319659 0.035304501 0.022974422 -9 -9 -9 0.01 dme-miR-34-5p 7mer-A1 ACTGCCA 3R 5226951 5226957 + 3R_5226951_5226957_+ 0.819326499 0.822870464 0.821098482 0.002505986 Vps37B FBtr0078777|FBtr0305002 5226913|5226913 5227526|5227526 3R + 5226912 5226989 stop_codon Vps37B FlyBase G40174.1 TGAGGTCTTGGTCCTTGGTCCTTGGTCCTCAGCGAATTAACTGCCATGGCGCATCAGTCTGCAGCAGGCAAGTTTGTA 24 5226971 0.727038355 9 19 142 0.806451613 1.397940009 0.258064516 0.291666667 0.451612903 24 6 0 25 3R:5226912-5226989 7 Vps37B FBtr0078777|FBtr0305002|FBtr0305001 5226913|5226913|5226913 5227526|5227526|5227526 ACTGCCA 7mer-A1 dme-miR-34-5p 3R + 5226912 5226983 stop_codon Vps37B FlyBase G30347.1 TGAGGTCTTGGTCCTTGGTCCTTGGTCCTCAGCGAATTAACTGCCATGGCGCATCAGTCTGCAGCAGGCAAG 20 5226948 0.953393778 10 20 119 1 1.447158031 0.392857143 0.35 0.535714286 20 0 0 28 3R:5226912-5226983 7 12 4655 FBgn0037299 170.3333333 20.86666667 31.67333333 0.070450098 0.575079872 0.378867607 -20 3 -8.5 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 5227334 5227341 - 3R_5227334_5227341_- 0.500120318 0.500120318 0.500120318 0 Kat60 FBtr0078827|FBtr0334909 5227287|5227287 5227991|5227991 3R - 5227314 5227441 3'utr Kat60 FlyBase G48076.1 ATATATCATAGTTTAGTGCAGGCAGAGATGTGTGTACCAGAAAGTTCCCTCTGATTTGCAATTAACCCACTGTAATCAGAAGATGAAACTGAAGCAATATGTACTTAAAGAGAGGATTCTGAAATTTT 473 5227342 0.729365226 20 464 2411 0.980251346 2.737192643 0.122082585 0.143763214 0.272890485 473 11 0 546 3R:5227314-5227441 8 Kat60 FBtr0334909|FBtr0078827 5227287|5227287 5227991|5227991 GTACTTAA 8mer-A1 dme-miR-252-5p 3R - 5227307 5227373 3'utr Kat60 FlyBase G36284.1 ACTGTAATCAGAAGATGAAACTGAAGCAATATGTACTTAAAGAGAGGATTCTGAAATTTTAAACAAT 314 5227342 0.728860425 11 300 1623 0.953333333 2.331427297 0.111111111 0.340764331 0.54 314 20 1 429 3R:5227307-5227373 8 359 4656 FBgn0040208 671.9533333 31.69333333 48.73 0.534263292 11.32730332 7.367124974 1 1 1 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 3R 5227448 5227453 + 3R_5227448_5227453_+ 1 1 1 0 Vps37B FBtr0078777|FBtr0305002 5226913|5226913 5227526|5227526 3R + 5227336 5227470 coding-3'utr Vps37B FlyBase G40176.1 AAGTACATATTGCTTCAGTTTCATCTTCTGATTACAGTGGGTTAATTGCAAATCAGAGGGAACTTTCTGGTACACACATCTCTGCCTGCACTAAACTATGATATATATGTATATGTGAAAGTATAAATTAAGCGA 56 5227446 0.984861482 18 53 424 0.953125 1.484299839 0.21875 0.107142857 0.21875 56 2 1 61 3R:5227336-5227470 6 Vps37B FBtr0078777|FBtr0305002|FBtr0305001 5226913|5226913|5226913 5227526|5227526|5227526 ATGTGA 6mer3-8 dme-miR-1003-3p 3R + 5227372 5227469 3'utr Vps37B FlyBase G30350.1 GTGGGTTAATTGCAAATCAGAGGGAACTTTCTGGTACACACATCTCTGCCTGCACTAAACTATGATATATATGTATATGTGAAAGTATAAATTAAGCG 41 5227447 0.987656272 13 33 295 0.810344828 1.371067862 0.413793103 0.365853659 0.551724138 41 10 1 47 3R:5227372-5227469 6 26.5 4657 FBgn0037299 170.3333333 20.86666667 31.67333333 0.155577299 1.269968051 0.836665965 2 1 1.5 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 3R 5236189 5236195 + 3R_5236189_5236195_+ 0.620204266 0.620204266 0.620204266 0 Mms19 FBtr0078778 5236033 5236288 3R + 5236149 5236204 3'utr Mms19 FlyBase G40186.1 TTTGGAAAAAGCAAAATTATAAAGTAAACGCGAAATTGTATGCATTTTATATTACT 15 5236185 0.990857872 4 14 147 0.9375 1.176091259 0.0625 0.066666667 0.125 15 1 0 15 3R:5236149-5236204 7 Mms19 FBtr0078778 5236033 5236288 TGCATTT 7mer-m8 dme-miR-277-3p 3R + 5236160 5236200 3'utr Mms19 FlyBase G30357.1 CAAAATTATAAAGTAAACGCGAAATTGTATGCATTTTATAT 14 5236185 0.76767203 4 14 133 1 1.322219295 0 0.285714286 0.523809524 14 0 0 21 3R:5236160-5236200 7 14 4658 FBgn0037301 547.33 20.46333333 31.32 0.025578719 0.684150513 0.446998723 4 4 4 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 5268002 5268007 + 3R_5268002_5268007_+ 1 1 1 0 Hph FBtr0334275|FBtr0344333 5267839|5267839 5268598|5269046 3R + 5267894 5268399 5'utr Hph FlyBase G40198.1 CAAACACACATGTATAAAGCTAGTTAAAAACTATTTATAGCTTCGGAGGGGCGGCAGCGCAAGCCCGCATTGCGAAAGTTAATCAAAGCTCCTTTAGTCGTTAAGCCTTCTAGTTTAGTCTCTAAGTCGTACCCTTAGTCATTTTCGCATTAACCATTAGCTTACTGCCATGTCAGCGTCCGAGTTGGTTGTTTATTAATTTTAGTTTGTTGCATCTTTGTCAGGACCTTTTGCCTAGCTCATTCTTAGTTTTTGGCTGCCAAAGTATTATACCTAAAGAGAAGTTAACTAGATTCAATAACATAAGCAACTGTCGCGACGCTCATTGCATCTTATCTCAAAATTATTTAACAAGCCAGTAAATCGTGGACAAACGCGGTCACTGGCTAACACTCAATCTGTCGACTCTCATGCATCTTGTTAGACATCTTTTTCATATCGTTTACATCTAATAACAAACGGAAATAAATGTTTGTCCAAATACGTTCTCTTGTTATCTGTAAATC 530 5267987 0.8643311 102 500 4289 0.945773525 1.596963434 0.145135566 0.150943396 0.282296651 530 20 14 593 3R:5267894-5268399 6 Hph FBtr0344333|FBtr0334275 5267839|5267839 5269046|5268598 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 5267895 5268399 5'utr Hph FlyBase G30371.1 AAACACACATGTATAAAGCTAGTTAAAAACTATTTATAGCTTCGGAGGGGCGGCAGCGCAAGCCCGCATTGCGAAAGTTAATCAAAGCTCCTTTAGTCGTTAAGCCTTCTAGTTTAGTCTCTAAGTCGTACCCTTAGTCATTTTCGCATTAACCATTAGCTTACTGCCATGTCAGCGTCCGAGTTGGTTGTTTATTAATTTTAGTTTGTTGCATCTTTGTCAGGACCTTTTGCCTAGCTCATTCTTAGTTTTTGGCTGCCAAAGTATTATACCTAAAGAGAAGTTAACTAGATTCAATAACATAAGCAACTGTCGCGACGCTCATTGCATCTTATCTCAAAATTATTTAACAAGCCAGTAAATCGTGGACAAACGCGGTCACTGGCTAACACTCAATCTGTCGACTCTCATGCATCTTGTTAGACATCTTTTTCATATCGTTTACATCTAATAACAAACGGAAATAAATGTTTGTCCAAATACGTTCTCTTGTTATCTGTAAATC 372 5267987 0.909777146 86 346 2965 0.925476603 1.882443217 0.131715771 0.379032258 0.59965338 372 37 6 534 3R:5267895-5268399 6 34 4659 FBgn0264785 976.6833333 49.43666667 74.10666667 0.034811693 0.687748635 0.458798129 15 15 15 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3R 5268153 5268158 + 3R_5268153_5268158_+ 1 1 1 0 Hph FBtr0334275|FBtr0344333 5267839|5267839 5268598|5269046 3R + 5267894 5268399 5'utr Hph FlyBase G40198.1 CAAACACACATGTATAAAGCTAGTTAAAAACTATTTATAGCTTCGGAGGGGCGGCAGCGCAAGCCCGCATTGCGAAAGTTAATCAAAGCTCCTTTAGTCGTTAAGCCTTCTAGTTTAGTCTCTAAGTCGTACCCTTAGTCATTTTCGCATTAACCATTAGCTTACTGCCATGTCAGCGTCCGAGTTGGTTGTTTATTAATTTTAGTTTGTTGCATCTTTGTCAGGACCTTTTGCCTAGCTCATTCTTAGTTTTTGGCTGCCAAAGTATTATACCTAAAGAGAAGTTAACTAGATTCAATAACATAAGCAACTGTCGCGACGCTCATTGCATCTTATCTCAAAATTATTTAACAAGCCAGTAAATCGTGGACAAACGCGGTCACTGGCTAACACTCAATCTGTCGACTCTCATGCATCTTGTTAGACATCTTTTTCATATCGTTTACATCTAATAACAAACGGAAATAAATGTTTGTCCAAATACGTTCTCTTGTTATCTGTAAATC 530 5268147 0.8643311 102 500 4289 0.945773525 1.596963434 0.145135566 0.150943396 0.282296651 530 20 14 593 3R:5267894-5268399 6 Hph FBtr0344333|FBtr0334275 5267839|5267839 5269046|5268598 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 5267895 5268399 5'utr Hph FlyBase G30371.1 AAACACACATGTATAAAGCTAGTTAAAAACTATTTATAGCTTCGGAGGGGCGGCAGCGCAAGCCCGCATTGCGAAAGTTAATCAAAGCTCCTTTAGTCGTTAAGCCTTCTAGTTTAGTCTCTAAGTCGTACCCTTAGTCATTTTCGCATTAACCATTAGCTTACTGCCATGTCAGCGTCCGAGTTGGTTGTTTATTAATTTTAGTTTGTTGCATCTTTGTCAGGACCTTTTGCCTAGCTCATTCTTAGTTTTTGGCTGCCAAAGTATTATACCTAAAGAGAAGTTAACTAGATTCAATAACATAAGCAACTGTCGCGACGCTCATTGCATCTTATCTCAAAATTATTTAACAAGCCAGTAAATCGTGGACAAACGCGGTCACTGGCTAACACTCAATCTGTCGACTCTCATGCATCTTGTTAGACATCTTTTTCATATCGTTTACATCTAATAACAAACGGAAATAAATGTTTGTCCAAATACGTTCTCTTGTTATCTGTAAATC 372 5268147 0.909777146 86 346 2965 0.925476603 1.882443217 0.131715771 0.379032258 0.59965338 372 37 6 534 3R:5267895-5268399 6 62.5 4660 FBgn0264785 976.6833333 49.43666667 74.10666667 0.063992082 1.264243814 0.843378913 6 6 6 0.01 dme-miR-1007-3p 7mer-A1 GAGCTTA 3R 5268548 5268554 + 3R_5268548_5268554_+ 0.823349562 0.823349562 0.823349562 0 Hph FBtr0334275|FBtr0344333 5267839|5267839 5268598|5269046 3R + 5268528 5268554 5'utr Hph FlyBase G40200.1 AAGTGGTTCTATTTGGTACAGAGCTTA 6 5268538 0.658841827 3 6 45 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3R:5268528-5268554 7 Hph FBtr0344333|FBtr0334275 5267839|5267839 5269046|5268598 GAGCTTA 7mer-A1 dme-miR-1007-3p 3R + 5268503 5268567 5'utr Hph FlyBase G30372.1 GTGGTTGTAGAGAGATGGATTTTATAAGTGGTTCTATTTGGTACAGAGCTTAAAGATACTAATAT 9 5268539 0.989654851 6 8 78 1 1.322219295 0.047619048 0.666666667 0.857142857 9 0 0 21 3R:5268503-5268567 7 5 4661 FBgn0264785 976.6833333 49.43666667 74.10666667 0.005119367 0.101139505 0.067470313 10 9 9.5 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 3R 5273137 5273142 - 3R_5273137_5273142_- 0.999983969 0.999993555 0.999988762 6.79E-06 mtd FBtr0110932|FBtr0078813|FBtr0078817|FBtr0078814|FBtr0273432|FBtr0078812|FBtr0100197|FBtr0273433|FBtr0078815|FBtr0078810|FBtr0306695|FBtr0078818|FBtr0273431|FBtr0333695|FBtr0273434|FBtr0306694|FBtr0110933|FBtr0273430|FBtr0078811|FBtr0308580|FBtr0308581|FBtr0100199|FBtr0078816 5272945|5272945|5270114|5270114|5272945|5272945|5272945|5272945|5272945|5270114|5272945|5272945|5272945|5272945|5272945|5272945|5272945|5272438|5272945|5272945|5272945|5272945|5272945 5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946 3R - 5272951 5273418 3'utr mtd FlyBase G48103.1 ATTATGTTTAGTTCTTAATACCGAAAATTATAAACACCAAATTGTGAGAAGAGACATATTGAAAATAGGCAGATTTTTATCATTTATCGTGTCCAGTTCTCTGGATTGATTTCAGTTTGAATTTAGTTTCGATTGTTTGAGTTACTAGAGTTATTTGAGAACATTGTGAAAAGCGAAGCGAGCTGAGATGAGAAAAATAAAAAGAATGTCGATATAATTTATAGTGCAAAAGTGCTGATTGCAAGTAAAACTAAAGCGAAGATAACTTTAAACGATTTGACTTTTATGTATATGTAAAGAAGGAGCCGCGAAGAGCTGAGAGCGAGCGTTTTATTTTTAGTTTTACACGATATACATACATACATATATTTAATTACGATTATTTTAATGCTAATGATGTTGACTTTTATGCAATTATACTAAAACAAAAACAGAAACAACACCAGAATGAAATACACAATATTATAC 1178 5273135 0.946589854 78 1084 9277 0.918824353 1.686900962 0.282715185 0.176570458 0.321203639 1178 90 26 1313 3R:5272951-5273418 6 mtd FBtr0078810|FBtr0273431|FBtr0078811|FBtr0078818|FBtr0110933|FBtr0100199|FBtr0306694|FBtr0273430|FBtr0078815|FBtr0308580|FBtr0306695|FBtr0308581|FBtr0333695|FBtr0078816|FBtr0273434|FBtr0078813|FBtr0273432|FBtr0078814|FBtr0100197|FBtr0078812|FBtr0110932|FBtr0273433|FBtr0078817 5270114|5272945|5272945|5272945|5272945|5272945|5272945|5272438|5272945|5272945|5272945|5272945|5272945|5272945|5272945|5272945|5272945|5270114|5272945|5272945|5272945|5272945|5270114 5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 5273043 5273335 3'utr mtd FlyBase G36311.1 TTATCGTGTCCAGTTCTCTGGATTGATTTCAGTTTGAATTTAGTTTCGATTGTTTGAGTTACTAGAGTTATTTGAGAACATTGTGAAAAGCGAAGCGAGCTGAGATGAGAAAAATAAAAAGAATGTCGATATAATTTATAGTGCAAAAGTGCTGATTGCAAGTAAAACTAAAGCGAAGATAACTTTAAACGATTTGACTTTTATGTATATGTAAAGAAGGAGCCGCGAAGAGCTGAGAGCGAGCGTTTTATTTTTAGTTTTACACGATATACATACATACATATATTTAATTA 769 5273135 0.896639283 48 703 6108 0.90948651 1.977723605 0.298520453 0.348504551 0.563968668 769 94 10 1045 3R:5273043-5273335 6 403 4662 FBgn0013576 2915.913333 146.2033333 223.7233333 0.138207125 2.756435102 1.801332002 -7 -7 -7 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 3R 5273700 5273705 - 3R_5273700_5273705_- 1 1 1 0 mtd FBtr0110932|FBtr0078813|FBtr0078817|FBtr0078814|FBtr0273432|FBtr0078812|FBtr0100197|FBtr0273433|FBtr0078815|FBtr0078810|FBtr0306695|FBtr0078818|FBtr0273431|FBtr0333695|FBtr0273434|FBtr0306694|FBtr0110933|FBtr0273430|FBtr0078811|FBtr0308580|FBtr0308581|FBtr0100199|FBtr0078816 5272945|5272945|5270114|5270114|5272945|5272945|5272945|5272945|5272945|5270114|5272945|5272945|5272945|5272945|5272945|5272945|5272945|5272438|5272945|5272945|5272945|5272945|5272945 5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946 3R - 5273678 5273837 3'utr mtd FlyBase G48104.3 GAGAAAGATGTCAAAAGCTGGTGTGCGTCCAAGGATCATCCCTTCGGAACGGTCCACACAGCCCGAACCCCGAAACACTTGAATACACGAACACCACCACATGAAGATGGTTTTGAAGGGATCTGATCTGAAGAAAAATGCTTGTGAAAACTCCGTTCTC 513 5273699 0.962691765 21 500 2456 0.978896104 1.877227325 0.327922078 0.169590643 0.308441558 513 6 7 603 3R:5273678-5273837 6 mtd FBtr0078810|FBtr0273431|FBtr0078811|FBtr0078818|FBtr0110933|FBtr0100199|FBtr0306694|FBtr0273430|FBtr0078815|FBtr0308580|FBtr0306695|FBtr0308581|FBtr0333695|FBtr0078816|FBtr0273434|FBtr0078813|FBtr0273432|FBtr0078814|FBtr0100197|FBtr0078812|FBtr0110932|FBtr0273433|FBtr0078817 5270114|5272945|5272945|5272945|5272945|5272945|5272945|5272438|5272945|5272945|5272945|5272945|5272945|5272945|5272945|5272945|5272945|5270114|5272945|5272945|5272945|5272945|5270114 5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946 GAAAAA 6mer3-8 dme-miR-980-5p 3R - 5273679 5273735 3'utr mtd FlyBase G36313.2 GAAGATGGTTTTGAAGGGATCTGATCTGAAGAAAAATGCTTGTGAAAACTCCGTTCT 369 5273699 0.902399657 10 349 1716 0.941520468 1.40519353 0.323586745 0.313351499 0.50877193 367 12 18 483 3R:5273679-5273735 6 412.5 4663 FBgn0013576 2915.913333 146.2033333 223.7233333 0.14146511 2.8214131 1.843795164 -6 -6 -6 0.01 dme-miR-305-5p 7mer-m8 AGTACAA 3R 5396375 5396381 + 3R_5396375_5396381_+ 0.643255554 0.643267584 0.643261569 8.49E-06 CG1172 FBtr0309312|FBtr0078792|FBtr0333810 5396179|5396179|5396179 5397614|5397188|5399510 3R + 5396318 5396412 3'utr CG1172 FlyBase G40223.1 AGTTCATGGCACAAGGAACCATAAGGGGAATGTACAGAAAATAGCAGAGCATCAACGAGTACAACAGCAACAGCATACTCATAGCATTTATCAAA 26 5396359 0.91802179 7 23 77 0.866666667 1.414973348 0.1 0.153846154 0.266666667 26 4 0 26 3R:5396318-5396412 7 CG1172 FBtr0078792|FBtr0333810|FBtr0309312 5396179|5396179|5396179 5397188|5399510|5397614 AGTACAA 7mer-m8 dme-miR-305-5p 3R + 5396353 5396392 3'utr CG1172 FlyBase G30391.1 AGAAAATAGCAGAGCATCAACGAGTACAACAGCAACAGCA 15 5396359 0.919120157 2 12 23 0.857142857 0.954242509 0.142857143 0.333333333 0.523809524 15 2 1 18 3R:5396353-5396392 7 16.5 4664 FBgn0264712 391.6633333 23.33 36.07 0.042128018 0.707243892 0.457443859 16 16 16 0.01 dme-miR-8-3p 6mer2-7 AGTATT 3R 5396867 5396872 + 3R_5396867_5396872_+ 1 1 1 0 CG1172 FBtr0309312|FBtr0078792|FBtr0333810 5396179|5396179|5396179 5397614|5397188|5399510 3R + 5396854 5396895 3'utr CG1172 FlyBase G40227.1 AAACGAGAAACGTAGTATTTGGCCGCAATGGAAAGCATGCAA 7 5396873 0.946458281 2 7 31 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3R:5396854-5396895 6 CG1172 FBtr0078792|FBtr0333810|FBtr0309312 5396179|5396179|5396179 5397188|5399510|5397614 AGTATT 6mer2-7 dme-miR-8-3p 3R + 5396852 5396886 3'utr CG1172 FlyBase G30396.1 ATAAACGAGAAACGTAGTATTTGGCCGCAATGGAA 11 5396872 0.940816989 3 11 46 1 1.301029996 0.3 0.454545455 0.7 11 0 0 20 3R:5396852-5396886 6 9 4665 FBgn0264712 391.6633333 23.33 36.07 0.022978919 0.385769396 0.249514832 -6 -5 -5.5 0.01 dme-miR-999-3p 7mer-m8 AGTTAAC 3R 5397070 5397076 + 3R_5397070_5397076_+ 0.674514203 0.674514076 0.674514139 7.07E-08 CG1172 FBtr0309312|FBtr0078792|FBtr0333810 5396179|5396179|5396179 5397614|5397188|5399510 3R + 5397031 5397141 3'utr CG1172 FlyBase G40228.1 GAGGAGGGAGGGCAGTGAATGCGAGGTGGGGAGTTGGAGAGTTAACCCAAGTACCTTATAAATGTATATGATTTAATTTGCGTTTGGAGTCAATAACTTATCTCTGATGTA 34 5397072 0.98171724 11 32 234 0.921052632 1.06694679 0.131578947 0.117647059 0.210526316 34 1 2 35 3R:5397031-5397141 7 CG1172 FBtr0078792|FBtr0333810|FBtr0309312 5396179|5396179|5396179 5397188|5399510|5397614 AGTTAAC 7mer-m8 dme-miR-999-3p 3R + 5397024 5397095 3'utr CG1172 FlyBase G30397.1 ACATCGTGAGGAGGGAGGGCAGTGAATGCGAGGTGGGGAGTTGGAGAGTTAACCCAAGTACCTTATAAATGT 15 5397072 0.946216683 7 15 61 1 1.255272505 0.166666667 0.2 0.333333333 15 0 0 18 3R:5397024-5397095 7 14.5 4666 FBgn0264712 391.6633333 23.33 36.07 0.037021592 0.62151736 0.401996119 -2 -2 -2 0.01 dme-miR-307a-3p 8mer-A1 GGTTGTGA 3R 5458900 5458907 - 3R_5458900_5458907_- 0.674981957 0.674981957 0.674981957 0 PEK FBtr0078770|FBtr0330027|FBtr0330026 5458561|5458561|5458561 5459391|5459391|5459391 3R - 5458883 5458928 3'utr PEK FlyBase G48172.1 CTAATTGCCCATAGAGATAATGGTTGTGACTAATCGCTTGGCATAC 70 5458908 0.798438518 3 67 491 0.953488372 1.436692598 0.093023256 0.171428571 0.325581395 70 2 2 82 3R:5458883-5458928 8 PEK FBtr0330027|FBtr0330026|FBtr0078770 5458561|5458561|5458561 5459391|5459391|5459391 GGTTGTGA 8mer-A1 dme-miR-307a-3p 3R - 5458884 5458924 3'utr PEK FlyBase G36375.1 TTGCCCATAGAGATAATGGTTGTGACTAATCGCTTGGCATA 55 5458908 0.796734868 3 53 371 0.975609756 1.903089987 0.158536585 0.381818182 0.585365854 55 2 0 80 3R:5458884-5458924 8 62.5 4667 FBgn0037327 1339.34 35.69 54.59666667 0.046664775 1.75119081 1.144758532 1 1 1 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 3R 5459276 5459281 - 3R_5459276_5459281_- 1 1 1 0 PEK FBtr0078770|FBtr0330027|FBtr0330026 5458561|5458561|5458561 5459391|5459391|5459391 3R - 5459243 5459302 3'utr PEK FlyBase G48174.1 GTATCGCCATCGCTTATTCCTTACCTGGCTATGCCTTATTCGCTGACCTCGACCCGTAAA 94 5459259 0.854053756 13 87 675 0.927927928 1.53571597 0.126126126 0.127659574 0.261261261 94 6 2 103 3R:5459243-5459302 6 PEK FBtr0330027|FBtr0330026|FBtr0078770 5458561|5458561|5458561 5459391|5459391|5459391 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 3R - 5459243 5459301 3'utr PEK FlyBase G36376.2 TATCGCCATCGCTTATTCCTTACCTGGCTATGCCTTATTCGCTGACCTCGACCCGTAAA 81 5459259 0.838549509 10 76 566 0.925619835 1.572096768 0.165289256 0.382716049 0.58677686 81 7 2 112 3R:5459243-5459301 6 40.5 4668 FBgn0037327 1339.34 35.69 54.59666667 0.030238774 1.134771645 0.741803529 -22 -22 -22 0.01 dme-miR-1007-3p 7mer-m8 TGAGCTT 3R 5459364 5459370 - 3R_5459364_5459370_- 0.620203442 0.620203442 0.620203442 0 PEK FBtr0078770|FBtr0330027|FBtr0330026 5458561|5458561|5458561 5459391|5459391|5459391 3R - 5459309 5459421 stop_codon PEK FlyBase G48175.1 TTCAGCAGCTCCAGTGAGCCGCATCAGTGATAGATCAGACAATTTGGGCCATGAGCTTGGACACCCATTCTGTCAGCGCCAAACTCAGTCACTTATAGCATTTCGCTTGTGAG 28 5459398 0.960548516 12 28 138 1 1.544068044 0.228571429 0.178571429 0.342857143 28 0 0 35 3R:5459309-5459421 7 PEK FBtr0330027|FBtr0330026|FBtr0078770 5458561|5458561|5458561 5459391|5459391|5459391 TGAGCTT 7mer-m8 dme-miR-1007-3p 3R - 5459326 5459422 stop_codon PEK FlyBase G36377.1 CTTCAGCAGCTCCAGTGAGCCGCATCAGTGATAGATCAGACAATTTGGGCCATGAGCTTGGACACCCATTCTGTCAGCGCCAAACTCAGTCACTTAT 22 5459398 0.937603944 10 22 93 1 1.505149978 0.34375 0.318181818 0.53125 22 0 0 32 3R:5459326-5459422 7 9 4669 FBgn0037327 1339.34 35.69 54.59666667 0.006719728 0.252171477 0.164845229 28 28 28 0.01 dme-miR-999-3p 6mer2-7 GTTAAC 3R 5480471 5480476 - 3R_5480471_5480476_- 1 1 1 0 ksr FBtr0344273|FBtr0078766|FBtr0344272 5478388|5480305|5479089 5480736|5480736|5480736 3R - 5480463 5480498 3'utr ksr FlyBase G48212.2 ACGAAACAAAGGCAAATCAAATGTTAACTCGAAAAA 29 5480477 0.930655244 2 28 112 0.96875 1.491361694 0.15625 0.068965517 0.15625 29 1 0 31 3R:5480463-5480498 6 ksr FBtr0078766|FBtr0344272|FBtr0344273 5480305|5479089|5478388 5480736|5480736|5480736 GTTAAC 6mer2-7 dme-miR-999-3p 3R - 5480444 5480492 3'utr ksr FlyBase G36399.1 CAAAGGCAAATCAAATGTTAACTCGAAAAAGACAAAACGCTTAAATGTT 18 5480477 0.775115524 2 15 72 0.842105263 0.903089987 0.157894737 0.055555556 0.105263158 18 2 1 16 3R:5480444-5480492 6 21.5 4670 FBgn0015402 480.34 14.36 21.92333333 0.044759962 1.497214485 0.980690284 1 1 1 0.01 dme-miR-34-5p 7mer-A1 ACTGCCA 3R 5485110 5485116 + 3R_5485110_5485116_+ 0.823349544 0.823349534 0.823349539 0 Hcs FBtr0078683|FBtr0345254|FBtr0345253|FBtr0336769 5484906|5484906|5484906|5484906 5485393|5485393|5485393|5485393 3R + 5485098 5485146 3'utr Hcs FlyBase G40256.1 ACTAAATTAAATACTGCCAAAGAGAATTATATGTTAAAGGAAGTCTCAA 12 5485111 0.958529711 4 12 57 1 1.176091259 0.066666667 0.166666667 0.333333333 12 0 0 15 3R:5485098-5485146 7 Hcs FBtr0345253|FBtr0336769|FBtr0078683|FBtr0345254 5484906|5484906|5484906|5484906 5485393|5485393|5485393|5485393 ACTGCCA 7mer-A1 dme-miR-34-5p 3R + 5485092 5485124 3'utr Hcs FlyBase G30417.1 TAATCCACTAAATTAAATACTGCCAAAGAGAAT 7 5485111 0.938792776 2 7 31 1 0.84509804 0.285714286 0 0 7 0 0 7 3R:5485092-5485124 7 8.5 4671 FBgn0037332 392.2933333 11.98 18.24666667 0.02166746 0.70951586 0.465838509 -1 -1 -1 0.01 dme-miR-1003-3p 7mer-m8 ATGTGAG 3R 5539637 5539643 - 3R_5539637_5539643_- 0.671796207 0.671796207 0.671796207 0 CG2519 FBtr0078761|FBtr0336771|FBtr0078762 5539508|5539508|5539508 5541031|5541031|5541031 3R - 5539603 5539666 3'utr CG2519 FlyBase G48224.1 ATGTATCAATAAATTATGAATGTATGTGAGCTCGCAACTTTATAAGCAATGTTTAGACGCAGGA 91 5539646 0.990777561 6 88 910 0.947916667 1.658011397 0.041666667 0.054945055 0.104166667 91 4 1 91 3R:5539603-5539666 7 CG2519 FBtr0078762|FBtr0078761|FBtr0336771 5539508|5539508|5539508 5541031|5541031|5541031 ATGTGAG 7mer-m8 dme-miR-1003-3p 3R - 5539608 5539660 3'utr CG2519 FlyBase G36409.1 CAATAAATTATGAATGTATGTGAGCTCGCAACTTTATAAGCAATGTTTAGACG 57 5539646 0.989592228 7 51 523 0.89010989 1.607455023 0.153846154 0.438596491 0.648351648 57 9 1 81 3R:5539608-5539660 7 73.5 4672 FBgn0037336 963.7466667 20.52333333 31.41666667 0.076264855 3.581289589 2.339522546 3 3 3 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 3R 5540377 5540382 - 3R_5540377_5540382_- 1 1 1 0 CG2519 FBtr0078761|FBtr0336771|FBtr0078762 5539508|5539508|5539508 5541031|5541031|5541031 3R - 5540373 5540413 3'utr CG2519 FlyBase G48228.1 TTATAAAAATTCCACGAAGTGTACCATGAGCAGTTAAACAA 29 5540394 0.858997659 4 28 123 1 1.544068044 0.057142857 0.206896552 0.342857143 29 0 0 35 3R:5540373-5540413 6 CG2519 FBtr0078762|FBtr0078761|FBtr0336771 5539508|5539508|5539508 5541031|5541031|5541031 AGTTAA 6mer3-8 dme-miR-999-3p 3R - 5540371 5540409 3'utr CG2519 FlyBase G36412.1 AAAAATTCCACGAAGTGTACCATGAGCAGTTAAACAAAT 18 5540394 0.829459261 2 17 64 1 1.380211242 0 0.277777778 0.458333333 18 0 0 24 3R:5540371-5540409 6 15.5 4673 FBgn0037336 963.7466667 20.52333333 31.41666667 0.016083065 0.755237941 0.4933687 12 12 12 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 5540463 5540468 - 3R_5540463_5540468_- 1 1 1 0 CG2519 FBtr0078761|FBtr0336771|FBtr0078762 5539508|5539508|5539508 5541031|5541031|5541031 3R - 5540452 5540483 3'utr CG2519 FlyBase G48229.1 ATGAGATTTTTCTTTGTACCTAACCAACAACA 12 5540469 0.865896085 2 11 94 1 1.176091259 0.333333333 0.166666667 0.333333333 12 0 0 15 3R:5540452-5540483 6 CG2519 FBtr0078762|FBtr0078761|FBtr0336771 5539508|5539508|5539508 5541031|5541031|5541031 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 5540451 5540493 3'utr CG2519 FlyBase G36413.1 AACATAAGCCATGAGATTTTTCTTTGTACCTAACCAACAACAA 16 5540469 0.981978876 3 15 113 1 1.361727836 0 0.375 0.565217391 16 0 0 23 3R:5540451-5540493 6 12.5 4674 FBgn0037336 963.7466667 20.52333333 31.41666667 0.012970213 0.609062855 0.397877984 1 1 1 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3R 5540650 5540656 - 3R_5540650_5540656_- 0.661615511 0.661615511 0.661615511 0 CG2519 FBtr0078761|FBtr0336771|FBtr0078762 5539508|5539508|5539508 5541031|5541031|5541031 3R - 5540513 5540985 3'utr CG2519 FlyBase G48230.1 TCATATAGATTTCTCGTGGCTGCTCGCTGTTGAAAAAAATCCGTTCTATCGAATGAAATCTCGAATATTGTGTTATTAAAGCGATGTTTTAAAAAGGAATCCGATTGTTCACACAAGAGTCCGAATCTCAATTAGAAAAACAAAATTACAGACCAGGGAACAATCGTAAATACTTCAAATTTTCTTCCCTTCTCAATATGAAATCCAAGGCAGCTAGCTAAAGTGTAATAAGAGCAAATTTATCTAACTATATTTACAGTATATGATATACATATATGATTCGGTAATCTACACCGCATAGGCGAAAAATCGAAAAGTAAAAACTTCAATCTAGTCGCAAGCAAATTTTATGCAGCAATCTAATTCGTTTTCGTATGCAATCTATAGGCATATTCTAATCAAAGCTTCATGACAGTTTTACATCCGAGTTTAGTTTATTGCGATATCCGTTCTAAAAGCCAATAAAGAAACAT 351 5540657 0.980791009 67 305 2176 0.871733967 1.610423555 0.123515439 0.170940171 0.308788599 351 46 8 367 3R:5540513-5540985 7 CG2519 FBtr0078762|FBtr0078761|FBtr0336771 5539508|5539508|5539508 5541031|5541031|5541031 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3R - 5540623 5540671 3'utr CG2519 FlyBase G36415.1 AAGTAAAAACTTCAATCTAGTCGCAAGCAAATTTTATGCAGCAATCTAA 44 5540659 0.765630006 6 39 226 0.915492958 1.511883361 0.028169014 0.409090909 0.633802817 44 5 1 65 3R:5540623-5540671 7 49 4675 FBgn0037336 963.7466667 20.52333333 31.41666667 0.050843237 2.387526393 1.559681698 1 3 2 0.01 "dme-miR-995-3p,dme-miR-998-3p" 6mer2-7 GGTGCT 3R 5552927 5552932 - 3R_5552927_5552932_- 1 1 1 0 Pcmt FBtr0339519 5552821 5553255 3R - 5552912 5553024 stop_codon Pcmt FlyBase G48254.1 AAGGTGGAGATGACACGTCTCATGGGCGTAATGTACGTCCCTCTCACGGATCTTCGCTCCTGACTGCACAGAGTGGGAAGGTCGCTCGTTGCGGTGCTGCTGCTCGTGTTTTT 17 5552924 0.88195566 8 15 109 0.894736842 1.230448921 0.315789474 0.117647059 0.210526316 17 2 0 17 3R:5552912-5553024 6 Pcmt FBtr0339519|FBtr0078758 5552821|5552821 5553255|5552961 GGTGCT 6mer2-7 "dme-miR-995-3p,dme-miR-998-3p" 3R - 5552900 5552947 3'utr Pcmt FlyBase G36433.1 AAGGTCGCTCGTTGCGGTGCTGCTGCTCGTGTTTTTTCTCTACCTAAT 8 5552924 0.983190637 5 8 65 1 1 0.4 0.25 0.4 8 0 0 10 3R:5552900-5552947 6 6.5 4676 FBgn0086768 265.8133333 34.49333333 52.17666667 0.02445325 0.188442211 0.124576758 -8 -8 -8 0.01 dme-miR-980-5p 7mer-m1 AAAAACT 3R 5558130 5558136 - 3R_5558130_5558136_- 0.765586663 0.765586663 0.765586663 0 Pi4KIIalpha FBtr0078756|FBtr0078755|FBtr0078757 5557661|5557661|5557661 5558297|5558297|5558297 3R - 5558108 5558149 3'utr Pi4KIIalpha FlyBase G48261.1 GTATTTTTTGCCAAAAAACTCAAATGGTCATATTCAATAATT 13 5558125 0.766484601 3 10 69 0.846153846 1.041392685 0.076923077 0.083333333 0.153846154 12 2 0 11 3R:5558108-5558149 7 Pi4KIIalpha FBtr0078757|FBtr0078756|FBtr0078755 5557661|5557661|5557661 5558297|5558297|5558297 AAAAACT 7mer-m1 dme-miR-980-5p 3R - 5558108 5558169 3'utr Pi4KIIalpha FlyBase G36438.1 GGAGCACGGAGCCTAGAAATGTATTTTTTGCCAAAAAACTCAAATGGTCATATTCAATAATT 9 5558124 0.97316693 6 9 57 1 1.041392685 0.090909091 0.222222222 0.363636364 9 0 0 11 3R:5558108-5558169 7 7 4677 FBgn0037339 341.1033333 13.78666667 21.30666667 0.020521641 0.507736944 0.32853567 -11 -12 -11.5 0.01 dme-miR-190-5p 6mer2-7 CATATC 3R 5567596 5567601 - 3R_5567596_5567601_- 1 1 1 0 CG2931 FBtr0078753 5567500 5567612 3R - 5567534 5567647 stop_codon CG2931 FlyBase G48277.1 AGGTGCTTCTGCAGGCCTTCAATTCCATGACTTGAATCTGAGTGTGCATATCGTGTCCTTTAGGCTAGTTTCGGTCACTTTGATGTAGCAAATTAGATTTGGATGTTGCTGCTA 22 5567588 0.987372324 11 22 201 1 1.462397998 0.344827586 0.272727273 0.448275862 22 0 0 29 3R:5567534-5567647 6 CG2931 FBtr0078753 5567500 5567612 CATATC 6mer2-7 dme-miR-190-5p 3R - 5567577 5567615 stop_codon CG2931 FlyBase G36451.1 TGAATCTGAGTGTGCATATCGTGTCCTTTAGGCTAGTTT 9 5567588 0.920426049 3 8 93 0.909090909 0.698970004 0.181818182 0.222222222 0.363636364 9 0 1 10 3R:5567577-5567615 6 12 4678 FBgn0037342 110.6666667 12.36333333 18.92333333 0.108433735 0.970612025 0.634137749 -13 -13 -13 0.01 dme-miR-970-3p 6mer3-8 TCTTAT 3R 5570196 5570201 + 3R_5570196_5570201_+ 1 1 1 0 Rheb FBtr0078694|FBtr0078693 5570116|5570116 5570491|5570491 3R + 5570140 5570294 3'utr Rheb FlyBase G40293.1 CGGCCGAACTGTTGGAAATACGGCAAATCGCTATGGCAATACGAAAATCGATTATCTCTTATCTACACAGTTGGGTCAGCGTGCATGGCGGGGCCGTACCCTTTGTGCGCAGCAGGAAAATCTAAAAATCTAATAGACCTAGTATTCTTAAGACC 61 5570198 0.983994104 16 59 455 0.96969697 1.505149978 0.075757576 0.081967213 0.151515152 61 1 1 64 3R:5570140-5570294 6 Rheb FBtr0078694|FBtr0078693 5570116|5570116 5570491|5570491 TCTTAT 6mer3-8 dme-miR-970-3p 3R + 5570180 5570247 3'utr Rheb FlyBase G30441.1 ACGAAAATCGATTATCTCTTATCTACACAGTTGGGTCAGCGTGCATGGCGGGGCCGTACCCTTTGTGC 25 5570191 0.983910273 7 24 185 0.954545455 1.62324929 0 0.6 0.772727273 25 2 0 42 3R:5570180-5570247 6 30.5 4679 FBgn0041191 427.6933333 44.04666667 67.49 0.071312779 0.692447404 0.451918803 -2 5 1.5 0.01 dme-miR-184-5p 6mer3-8 TGATAA 3R 5579374 5579379 - 3R_5579374_5579379_- 0.999990663 0.999999998 0.99999533 6.58E-06 CG2926 FBtr0078752|FBtr0336762 5579299|5579299 5580143|5584787 3R - 5579308 5579438 3'utr CG2926 FlyBase G48280.1 TCATCTATTAGGCACTTGATTTCGCATCGTGCGCCAGTCATACCTTTTTGCAACACGATTGATAACAGTATATATACATCTGGAAATTGTGCTAAATCGATTTGTAAATATCTATATAAATAAAAGCGATC 49 5579392 0.983339768 16 49 385 1 1.755874856 0.228070175 0.142857143 0.263157895 49 0 0 57 3R:5579308-5579438 6 CG2926 FBtr0078752|FBtr0336762 5579299|5579299 5580143|5584787 TGATAA 6mer3-8 dme-miR-184-5p 3R - 5579311 5579419 3'utr CG2926 FlyBase G36452.1 TTTCGCATCGTGCGCCAGTCATACCTTTTTGCAACACGATTGATAACAGTATATATACATCTGGAAATTGTGCTAAATCGATTTGTAAATATCTATATAAATAAAAGCG 32 5579391 0.98495609 11 28 230 0.955555556 1.33243846 0.4 0.21875 0.444444444 32 1 1 43 3R:5579311-5579419 6 3 4680 FBgn0037344 2023.256667 29.51333333 45.14 0.001482758 0.101648972 0.066459903 13 12 12.5 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 3R 5579575 5579580 - 3R_5579575_5579580_- 1 1 1 0 CG2926 FBtr0078752|FBtr0336762 5579299|5579299 5580143|5584787 3R - 5579516 5579602 3'utr CG2926 FlyBase G48281.1 ATTTAAATTAAAACACATCTGCGAAAAATGATTGATTTATAGCCACGACAAATTGGCTTGCACCAAATAAGGCGGTCAAATATTTTT 18 5579585 0.962064506 7 17 85 0.958333333 1.361727836 0 0.277777778 0.458333333 18 1 0 23 3R:5579516-5579602 6 CG2926 FBtr0078752|FBtr0336762 5579299|5579299 5580143|5584787 GAAAAA 6mer3-8 dme-miR-980-5p 3R - 5579522 5579598 3'utr CG2926 FlyBase G36453.1 AAATTAAAACACATCTGCGAAAAATGATTGATTTATAGCCACGACAAATTGGCTTGCACCAAATAAGGCGGTCAAAT 8 5579585 0.893888904 3 8 28 1 1 0.1 0.125 0.3 8 0 0 10 3R:5579522-5579598 6 10.5 4681 FBgn0037344 2023.256667 29.51333333 45.14 0.005189653 0.355771403 0.232609659 5 5 5 0.01 dme-miR-2535b-3p 7mer-A1 CGTGAGA 3R 5580237 5580243 - 3R_5580237_5580243_- 0.782911824 0.782911824 0.782911824 0 CG2926 FBtr0336762 5579299 5584787 3R - 5580184 5580252 5'utr CG2926 FlyBase G48284.1 TGACGCCTACGTGAGAAAATTCCGGGCCAAGCACAAGAAGTTGAGTCTCCTTAACACAGGACAAGTTAG 26 5580233 0.91102158 5 23 68 0.966666667 1.462397998 0.466666667 0.153846154 0.266666667 26 1 0 29 3R:5580184-5580252 7 CG2926 FBtr0336762 5579299 5584787 CGTGAGA 7mer-A1 dme-miR-2535b-3p 3R - 5580201 5580253 5'utr CG2926 FlyBase G36456.1 TTGACGCCTACGTGAGAAAATTCCGGGCCAAGCACAAGAAGTTGAGTCTCCTT 15 5580233 0.843927503 4 15 38 1 1.322219295 0.619047619 0.4 0.571428571 15 0 0 21 3R:5580201-5580253 7 17 4682 FBgn0037344 2023.256667 29.51333333 45.14 0.008402295 0.576010843 0.376606114 -10 -10 -10 0.01 dme-miR-282-5p 7mer-A1 GAGGCTA 3R 5582119 5582125 - 3R_5582119_5582125_- 0.823349562 0.823349562 0.823349562 0 CG2926 FBtr0336762 5579299 5584787 3R - 5582099 5582179 5'utr CG2926 FlyBase G48289.1 ATTTGCAGTGCTGTGGGAGCAGTAAAGAAGACGAAGCGCAAGCGTAAAAAGTTGGAGGCTAAGCCAGTGGCTATCATCGAT 123 5582127 0.951597146 7 121 561 0.978571429 2.136720567 0.428571429 0.12195122 0.228571429 123 3 0 137 3R:5582099-5582179 7 CG2926 FBtr0336762 5579299 5584787 GAGGCTA 7mer-A1 dme-miR-282-5p 3R - 5582099 5582148 5'utr CG2926 FlyBase G36458.1 CGAAGCGCAAGCGTAAAAAGTTGGAGGCTAAGCCAGTGGCTATCATCGAT 87 5582127 0.817003252 4 83 401 0.944444444 2.075546961 0.531746032 0.356321839 0.555555556 87 7 0 119 3R:5582099-5582148 7 101.5 4683 FBgn0037344 2023.256667 29.51333333 45.14 0.050166646 3.43912356 2.248560035 2 2 2 0.01 dme-miR-980-5p 7mer-m1 AAAAACT 3R 5582563 5582569 - 3R_5582563_5582569_- 0.765586663 0.765586663 0.765586663 0 CG2926 FBtr0336762 5579299 5584787 3R - 5582535 5582588 5'utr CG2926 FlyBase G48290.1 CGACAGCGCCCTTCAGGACAAAAACTCGTCTTGGACGCCCCCACTTGGAACGCC 9 5582557 0.93721119 5 9 34 1 1.079181246 0.25 0.222222222 0.416666667 9 0 0 12 3R:5582535-5582588 7 CG2926 FBtr0336762 5579299 5584787 AAAAACT 7mer-m1 dme-miR-980-5p 3R - 5582544 5582600 5'utr CG2926 FlyBase G36459.1 CGATTTCCTGCACGACAGCGCCCTTCAGGACAAAAACTCGTCTTGGACGCCCCCACT 6 5582557 0.932497205 4 6 20 1 1 0 0.5 0.7 6 0 0 10 3R:5582544-5582600 7 6.5 4684 FBgn0037344 2023.256667 29.51333333 45.14 0.003212642 0.22023944 0.143996455 -12 -12 -12 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 5583373 5583378 - 3R_5583373_5583378_- 1 1 1 0 CG2926 FBtr0336762 5579299 5584787 3R - 5583314 5583403 5'utr CG2926 FlyBase G48291.1 AACTACCACCATCAGCACAATCAGCACCAAAATTACTTTCCACCCAATCAGCATGGCCAGCATCAGCAGTACTTTCAACGTCCCAAACGA 49 5583366 0.966716881 8 47 252 0.964912281 1.740362689 0 0.163265306 0.280701754 49 2 0 55 3R:5583314-5583403 6 CG2926 FBtr0336762 5579299 5584787 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 5583336 5583382 5'utr CG2926 FlyBase G36460.1 CAGCACCAAAATTACTTTCCACCCAATCAGCATGGCCAGCATCAGCA 10 5583366 0.955848541 2 9 45 1 1.079181246 0 0.2 0.333333333 10 0 0 12 3R:5583336-5583382 6 23.5 4685 FBgn0037344 2023.256667 29.51333333 45.14 0.011614938 0.796250282 0.52060257 -12 -12 -12 0.01 dme-miR-305-5p 8mer-m1 AGTACAAT 3R 5584645 5584652 - 3R_5584645_5584652_- 0.570363044 0.570363044 0.570363044 0 CG2926 FBtr0336762 5579299 5584787 3R - 5584595 5584680 intron-5'utr CG2926 FlyBase G48294.1 AGGATGATGACGATATGAATGAAGATTTAGTACAATTAGATGATGATGATGAGGATACGGATATACCATTGCCTTTGGGGCCTGAG 52 5584654 0.724643409 14 52 383 1 1.763427994 0.172413793 0.115384615 0.206896552 52 0 0 58 3R:5584595-5584680 8 CG2926 FBtr0336762 5579299 5584787 AGTACAAT 8mer-m1 dme-miR-305-5p 3R - 5584534 5584670 5'utr CG2926 FlyBase G36463.1 CGATATGAATGAAGATTTAGTACAATTAGATGATGATGATGAGGATACGGATATACCATTGCCTTTGGGGCCTGAGCCCGAACCCGTTCCCGAAAAAGTCCCGAAAAGTAGTGATGATGACCTCTACGAGCCAGAGA 40 5584654 0.955552208 15 34 251 0.85 1.008600172 0.316666667 0.375 0.583333333 40 5 4 51 3R:5584534-5584670 8 31.5 4686 FBgn0037344 2023.256667 29.51333333 45.14 0.015568959 1.067314208 0.697828977 2 2 2 0.01 dme-miR-965-3p 6mer2-7 ACGCTT 3R 5589766 5589771 - 3R_5589766_5589771_- 1 1 1 0 noi FBtr0078751 5589599 5589820 3R - 5589735 5589773 3'utr noi FlyBase G48313.1 TGACGCTTCCTCTAAAACCTCAACAGTCTTTATAATTCA 6 5589762 0.753137976 5 6 40 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3R:5589735-5589773 6 noi FBtr0078751 5589599 5589820 ACGCTT 6mer2-7 dme-miR-965-3p 3R - 5589763 5589820 3'utr noi FlyBase G36475.1 AGGACAAGCCTACGATTATGGTCGCTTGAGTACCGGTCAATTCTATATGACGCTTCCT 5 5589780 0.986955637 3 3 33 0.875 0.84509804 0 0.4 0.625 5 1 0 7 3R:5589763-5589820 6 3 4687 FBgn0014366 277.7433333 18.25 27.88666667 0.010801339 0.164383562 0.107578293 -9 9 0 0.01 dme-miR-1006-3p 6mer2-7 GAATTT 3R 5593842 5593847 + 3R_5593842_5593847_+ 1 1 1 0 Vha26 FBtr0346137|FBtr0078701|FBtr0078700 5593353|5593353|5593353 5595356|5594699|5594699 3R + 5593787 5593849 3'utr Vha26 FlyBase G40314.1 TATGTGCTTATATTGTATACATACACTTTAAAATTTTGCATACATTCCTGTCCAAGAATTTTT 22 5593831 0.97323674 4 22 137 1 1.447158031 0.25 0.227272727 0.392857143 22 0 0 28 3R:5593787-5593849 6 Vha26 FBtr0078700|FBtr0078701|FBtr0346137 5593353|5593353|5593353 5594699|5594699|5595356 GAATTT 6mer2-7 dme-miR-1006-3p 3R + 5593822 5593846 3'utr Vha26 FlyBase G30452.1 TTGCATACATTCCTGTCCAAGAATT 14 5593831 0.722698376 2 14 80 1 1.322219295 0.142857143 0.428571429 0.619047619 14 0 0 21 3R:5593822-5593846 5 17 4688 FBgn0015324 3424.973333 191.1566667 292.79 0.004963542 0.088932289 0.058062092 11 11 11 0.01 dme-miR-79-3p 6mer2-7 AGCTTT 3R 5594277 5594282 + 3R_5594277_5594282_+ 0.999964579 0.999999456 0.999982017 2.47E-05 Vha26 FBtr0346137|FBtr0078701|FBtr0078700 5593353|5593353|5593353 5595356|5594699|5594699 3R + 5594245 5594305 3'utr Vha26 FlyBase G40316.1 TAGCTAAGTTTGTTGACCTGACCATCAAGTGCAGCTTTCACACCCTCATATAACTACTTAA 25 5594281 0.961779259 7 20 152 0.827586207 1.380211242 0.103448276 0.16 0.275862069 25 5 0 24 3R:5594245-5594305 6 Vha26 FBtr0078700|FBtr0078701|FBtr0346137 5593353|5593353|5593353 5594699|5594699|5595356 AGCTTT 6mer2-7 dme-miR-79-3p 3R + 5594136 5594299 3'utr Vha26 FlyBase G30454.1 ATGTCTGTTGTTGTTGAGATACCGAGAGTAGAGAATACACACTGCTTAGCACGCGACACTTAATACCCATTCATTACACATGCACCAACGACGATGAAGTTTTGCCAAGTAGCTAAGTTTGTTGACCTGACCATCAAGTGCAGCTTTCACACCCTCATATAACT 29 5594281 0.978436069 12 27 177 0.934782609 1.33243846 0.043478261 0.448275862 0.652173913 29 2 1 43 3R:5594136-5594299 6 16.5 4689 FBgn0015324 3424.973333 191.1566667 292.79 0.004817556 0.086316634 0.056354384 -4 -4 -4 0.01 dme-miR-304-5p 6mer2-7 GAGATT 3R 5602750 5602755 + 3R_5602750_5602755_+ 1 1 1 0 CG1427 FBtr0333279 5601975 5603185 3R + 5602690 5602817 3'utr CG1427 FlyBase G40323.1 CGGGGCGAGAACTTCAATTACCTGAGAGAGAACCTTAGGAAATTTGCAGAGCCACGCGGAGAGATTGTTATAGACAGCAGGTTTAACTCCATATCCTTGGCCATAACATTGGCCACTTTGGCTGGGGA 45 5602759 0.971922128 11 45 260 1 1.716003344 0.211538462 0.155555556 0.269230769 45 0 0 52 3R:5602690-5602817 6 CG1427 FBtr0333279 5601975 5603185 GAGATT 6mer2-7 dme-miR-304-5p 3R + 5602737 5602779 3'utr CG1427 FlyBase G30457.1 AGAGCCACGCGGAGAGATTGTTATAGACAGCAGGTTTAACTCC 11 5602757 0.97261508 4 9 57 0.916666667 1.342422681 0.25 0.727272727 0.875 11 2 0 22 3R:5602737-5602779 6 21.5 4690 FBgn0037347 155.3333333 12.17666667 18.71333333 0.138412017 1.76567205 1.148913431 -9 -7 -8 0.01 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 3R 5603024 5603031 + 3R_5603024_5603031_+ 0.674982063 0.674982063 0.674982063 0 CG1427 FBtr0333279 5601975 5603185 3R + 5603005 5603045 3'utr CG1427 FlyBase G40324.1 GCAGCAACCTGCAAGTTCCGTACCTGACTGTAGCGGCAGGA 7 5603020 0.874591877 3 7 29 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 3R:5603005-5603045 8 CG1427 FBtr0333279 5601975 5603185 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R + 5602988 5603045 intron-3'utr CG1427 FlyBase G30458.1 AGATTTCGGCTCCCACCGCAGCAACCTGCAAGTTCCGTACCTGACTGTAGCGGCAGGA 5 5603035 0.972291768 3 4 24 0.857142857 0.77815125 0.285714286 0.4 0.571428571 5 1 0 6 3R:5602988-5603045 8 5.5 4691 FBgn0037347 155.3333333 12.17666667 18.71333333 0.035407725 0.451683548 0.293908087 4 -11 -3.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 5616811 5616816 - 3R_5616811_5616816_- 1 1 1 0 Spec2 FBtr0078739 5616642 5617640 3R - 5616793 5616853 3'utr Spec2 FlyBase G48356.1 CTGGGCCAGCGACAATGCACCTAAGATGGACTATGGAGTACCTTTGTAGAACCCTGATTTA 22 5616827 0.96561233 4 22 119 1 1.380211242 0.083333333 0.090909091 0.166666667 22 0 0 24 3R:5616793-5616853 6 Spec2 FBtr0078739 5616642 5617640 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 5616795 5616852 3'utr Spec2 FlyBase G36505.1 TGGGCCAGCGACAATGCACCTAAGATGGACTATGGAGTACCTTTGTAGAACCCTGATT 25 5616809 0.966914639 4 24 141 0.952380952 1.602059991 0.30952381 0.44 0.666666667 25 2 0 40 3R:5616795-5616852 6 19 4692 FBgn0044823 199.1233333 13.74666667 20.92333333 0.09541825 1.382153249 0.908077107 11 -7 2 0.01 dme-miR-34-5p 7mer-A1 ACTGCCA 3R 5625661 5625667 + 3R_5625661_5625667_+ 0.823349562 0.823349562 0.823349562 0 RpL13A FBtr0335214 5625375 5625947 3R + 5625565 5625713 3'utr RpL13A FlyBase G40338.1 GTGTGTTCGACGGCATCCCATCGCCCTACGACAAGCGTCGCCGCGTCGTCGTGCCCATCGCTATGCGTGTGCTGACCCTGCGCTCCGACCGCAAGTACTGCCAGGTGGGTCGCCTGTCGCACGAGGTCGGCTGGCACTACCAGGACGTG 93 5625660 0.900201278 22 87 372 0.930434783 2.029383778 0.295652174 0.204301075 0.356521739 93 8 0 107 3R:5625565-5625713 7 RpL13A FBtr0335214 5625375 5625947 ACTGCCA 7mer-A1 dme-miR-34-5p 3R + 5625565 5625686 3'utr RpL13A FlyBase G30469.1 GTGTGTTCGACGGCATCCCATCGCCCTACGACAAGCGTCGCCGCGTCGTCGTGCCCATCGCTATGCGTGTGCTGACCCTGCGCTCCGACCGCAAGTACTGCCAGGTGGGTCGCCTGTCGCAC 64 5625660 0.837979753 17 56 282 0.884955752 1.301029996 0.247787611 0.515625 0.725663717 64 9 4 100 3R:5625565-5625686 7 34 4693 FBgn0037351 13566.65333 2375.826667 3587.31 0.002506145 0.014310808 0.009477854 1 1 1 0.01 dme-miR-988-3p 7mer-m8 ACAAGGG 3R 5625878 5625884 + 3R_5625878_5625884_+ 0.671796207 0.671796207 0.671796207 0 RpL13A FBtr0335214 5625375 5625947 3R + 5625737 5625948 3'utr RpL13A FlyBase G40339.1 CAAGGCCAAGCTCCGTGTCACCCTCAAGCACAACCGCGAGCTGAAGAAGCTGACGGTCAAGGCGCGCGAGAACATCGCGAAGGCCGCCGAGCCCTTCAACAAAATCATCAAATCCTACGGCTACGAGGTTTAAGGACAACAACAAGGGCAGAATTACATACGTTCAGATGCGTAGAAGTTTTTTAAAAGAGAATAAAACAACATCTAGTTTA 97 5625866 0.948433824 21 75 323 0.775 1.968482949 0.091666667 0.216494845 0.366666667 97 27 0 93 3R:5625737-5625948 7 RpL13A FBtr0335214 5625375 5625947 ACAAGGG 7mer-m8 dme-miR-988-3p 3R + 5625842 5625950 3'utr RpL13A FlyBase G30470.1 CATCAAATCCTACGGCTACGAGGTTTAAGGACAACAACAAGGGCAGAATTACATACGTTCAGATGCGTAGAAGTTTTTTAAAAGAGAATAAAACAACATCTAGTTTAAA 44 5625858 0.943848731 13 33 188 0.769230769 1.77815125 0.141025641 0.386363636 0.653846154 44 18 0 60 3R:5625842-5625950 7 19.5 4694 FBgn0037351 13566.65333 2375.826667 3587.31 0.001437348 0.008207669 0.005435828 12 20 16 0.01 dme-miR-277-3p 7mer-A1 GCATTTA 3R 5633191 5633197 + 3R_5633191_5633197_+ 0.823349562 0.823349562 0.823349562 0 CG31549 FBtr0078707|FBtr0335215 5633168|5633168 5633321|5633321 3R + 5633129 5633210 stop_codon CG31549 FlyBase G40345.1 TGCCCGTCGATGGAGGTCGTCACGCCATGTGCCCGCGATAGGATGCGGATGAGCAAATGGTGGCATTTATCGAATTTAGCGT 34 5633186 0.810633139 8 29 206 0.860465116 1.091080469 0.348837209 0.176470588 0.348837209 34 4 2 37 3R:5633129-5633210 7 CG31549 FBtr0335215|FBtr0078707 5633168|5633168 5633321|5633321 GCATTTA 7mer-A1 dme-miR-277-3p 3R + 5633168 5633199 stop_codon CG31549 FlyBase G30475.1 AGGATGCGGATGAGCAAATGGTGGCATTTATC 7 5633186 0.865596495 2 6 40 0.875 0.84509804 0.125 0.142857143 0.25 7 1 0 7 3R:5633168-5633199 7 17 4695 FBgn0051549 46.66666667 5.68 8.726666667 0.364285714 2.992957746 1.948051948 5 5 5 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 3R 5633273 5633278 + 3R_5633273_5633278_+ 1 1 1 0 CG31549 FBtr0078707|FBtr0335215 5633168|5633168 5633321|5633321 3R + 5633263 5633297 3'utr CG31549 FlyBase G40346.1 AAAAGTGCGCAGTTAAGATTTCTTGGATTTTTCCT 7 5633285 0.681564785 2 6 54 1 0.84509804 0.285714286 0 0 7 0 0 7 3R:5633263-5633297 6 CG31549 FBtr0335215|FBtr0078707 5633168|5633168 5633321|5633321 AGTTAA 6mer3-8 dme-miR-999-3p 3R + 5633256 5633300 3'utr CG31549 FlyBase G30476.1 ATACATTAAAAGTGCGCAGTTAAGATTTCTTGGATTTTTCCTCTC 8 5633284 0.991205306 5 7 68 0.857142857 1.079181246 0.071428571 0.625 0.785714286 8 2 0 12 3R:5633256-5633300 6 6.5 4696 FBgn0051549 46.66666667 5.68 8.726666667 0.139285714 1.144366197 0.744843392 -12 -11 -11.5 0.01 dme-miR-12-5p 6mer3-8 AATACT 3R 5634548 5634553 + 3R_5634548_5634553_+ 1 0.999981155 0.999990577 1.33E-05 CG12171 FBtr0078708 5634464 5634640 3R + 5634469 5634595 3'utr CG12171 FlyBase G40352.1 CGGAGTTTTTTATCCATGCATGCATTTATCTTATTTTTTTATTTTTAATTAAAGTAGCGCGCTTACCTCGTGTATTTCAAATACTTTTCAAGGATGTGATTCTATGTAAATGTAATAGTTTGCTAGA 98 5634539 0.732850117 21 92 750 0.949579832 1.575957189 0.109243697 0.163265306 0.31092437 98 4 2 113 3R:5634469-5634595 6 CG12171 FBtr0078708 5634464 5634640 AATACT 6mer3-8 dme-miR-12-5p 3R + 5634506 5634596 3'utr CG12171 FlyBase G30480.1 TTTATTTTTAATTAAAGTAGCGCGCTTACCTCGTGTATTTCAAATACTTTTCAAGGATGTGATTCTATGTAAATGTAATAGTTTGCTAGAA 64 5634539 0.68053577 10 61 465 0.969387755 1.977723605 0.183673469 0.375 0.591836735 64 3 0 95 3R:5634506-5634596 6 14 4697 FBgn0037354 132 16.08666667 24.41 0.106060606 0.870285951 0.573535436 9 9 9 0.01 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3R 5640284 5640289 - 3R_5640284_5640289_- 0.99653593 0.595132687 0.795834308 0.283834925 MTA1-like FBtr0078733|FBtr0290206|FBtr0330315|FBtr0078734 5639117|5638653|5639117|5639117 5640428|5640428|5640302|5640428 3R - 5640113 5640306 5'utr MTA1-like FlyBase G48370.1 CTAGGAGCACTCTCTGGTTTGACTGACGGGCTTGCCATGTACATACACCCGCAGCATAAGGCACACAGACGTGTGGACAGGCATTCGACTTAGGATCAGGATCAGTGTAGTTACAGCATCACTGTATGAACAGGACAACAAAACGCGATACCCGATAGCAACCACAAACCACTTTATTAGCGCTTAAATAGATG 45 5640289 0.965573035 14 40 215 0.839285714 1.371067862 0.142857143 0.2 0.357142857 45 8 1 47 3R:5640113-5640306 6 MTA1-like FBtr0078734|FBtr0330315|FBtr0290206|FBtr0078733 5639117|5639117|5638653|5639117 5640428|5640302|5640428|5640428 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3R - 5640270 5640301 3'utr MTA1-like FlyBase G36517.1 AGCACTCTCTGGTTTGACTGACGGGCTTGCCA 6 5640288 0.648616718 4 6 45 1 1.204119983 0.4375 0.833333333 0.9375 6 0 0 16 3R:5640270-5640301 6 9 4698 FBgn0027951 1255.973333 34.05666667 52.26666667 0.007165757 0.26426544 0.172193878 0 -1 -0.5 0.01 dme-miR-7-5p 6mer3-8 GTCTTC 3R 5640367 5640372 - 3R_5640367_5640372_- 1 1 1 0 MTA1-like FBtr0078733|FBtr0290206|FBtr0078734 5639117|5638653|5639117 5640428|5640428|5640428 3R - 5640353 5640393 3'utr MTA1-like FlyBase G48371.1 ATCGGCAACCAAGTTGTTATCGTCTTCAGCAAGTAGGTTCG 8 5640374 0.707407518 2 5 47 0.666666667 0.77815125 0.111111111 0.125 0.222222222 8 3 0 6 3R:5640353-5640393 6 MTA1-like FBtr0078734|FBtr0290206|FBtr0078733 5639117|5638653|5639117 5640428|5640428|5640428 GTCTTC 6mer3-8 dme-miR-7-5p 3R - 5640347 5640383 3'utr MTA1-like FlyBase G36518.1 AAGTTGTTATCGTCTTCAGCAAGTAGGTTCGAGCAGC 8 5640374 0.983903798 2 8 61 1 1.041392685 0 0.375 0.545454545 8 0 0 11 3R:5640347-5640383 6 7 4699 FBgn0027951 1255.973333 34.05666667 52.26666667 0.005573367 0.205539787 0.133928571 2 2 2 0.01 dme-miR-970-3p 6mer3-8 TCTTAT 3R 5652596 5652601 + 3R_5652596_5652601_+ 1 1 1 0 Sec23 FBtr0078711|FBtr0078710|FBtr0304794|FBtr0330314|FBtr0309091|FBtr0339320|FBtr0310266 5652469|5652469|5652469|5652469|5652469|5652469|5652469 5652629|5652629|5652629|5652629|5652629|5652629|5652629 3R + 5652570 5652633 3'utr Sec23 FlyBase G40382.1 ATACAACCACTTATTCCAATTGATCGTCTTATAACGCAATAAACTATTCAAATTATGTTCAACA 63 5652589 0.788541137 9 61 555 0.963414634 1.897627091 0.036585366 0.222222222 0.402439024 63 3 0 79 3R:5652570-5652633 6 Sec23 FBtr0310266|FBtr0339320|FBtr0309091|FBtr0330314|FBtr0304794|FBtr0078710|FBtr0078711 5652469|5652469|5652469|5652469|5652469|5652469|5652469 5652629|5652629|5652629|5652629|5652629|5652629|5652629 TCTTAT 6mer3-8 dme-miR-970-3p 3R + 5652520 5652608 3'utr Sec23 FlyBase G30497.1 GAAGGCGAACGACACCTGGAATCAATGGTCCAGGCAATGAAATTACGAATATACAACCACTTATTCCAATTGATCGTCTTATAACGCAA 37 5652590 0.987430809 10 35 310 0.94 1.672097858 0.02 0.27027027 0.46 37 3 0 47 3R:5652520-5652608 6 46.5 4700 FBgn0262125 974.67 44.53666667 67.54666667 0.047708455 1.044083527 0.688412949 7 6 6.5 0.01 dme-miR-282-5p 6mer3-8 AGAGGC 3R 5653165 5653170 - 3R_5653165_5653170_- 1 1 1 0 elm FBtr0334953|FBtr0078732 5652638|5652831 5653251|5653251 3R - 5653140 5653274 stop_codon elm FlyBase G48391.1 TGTCCATACGGTTTCTCAACTAGGCTAGCTGGATGCGGCAATCACGAGGAAAGAGCGACCTTCTTAGTCAGTGTGTACCAAATAGTTTAGGATGCAGTTAGTCGAGAGGCATTCCGGCGGGTTACTGAAAACTCT 123 5653163 0.978011044 20 118 782 0.957746479 1.832508913 0.183098592 0.138211382 0.253521127 123 5 1 136 3R:5653140-5653274 6 elm FBtr0334953|FBtr0078732 5652638|5652831 5653251|5653251 AGAGGC 6mer3-8 dme-miR-282-5p 3R - 5653141 5653229 3'utr elm FlyBase G36537.1 GAGGAAAGAGCGACCTTCTTAGTCAGTGTGTACCAAATAGTTTAGGATGCAGTTAGTCGAGAGGCATTCCGGCGGGTTACTGAAAACTC 74 5653163 0.972309997 9 71 454 0.958677686 2.064457989 0.289256198 0.445945946 0.661157025 74 5 0 116 3R:5653141-5653229 6 59.5 4701 FBgn0037358 499.3333333 46.51666667 71.55666667 0.119158879 1.27911143 0.831508828 -7 -7 -7 0.01 dme-miR-1002-5p 7mer-m8 CTACTTA 3R 5678829 5678835 + 3R_5678829_5678835_+ 0.592119442 0.592052439 0.59208594 4.74E-05 Atg17 FBtr0078716|FBtr0334946 5678800|5678800 5679930|5679930 3R + 5678812 5678868 3'utr Atg17 FlyBase G40433.1 TTGGGACTAACATATAACTACTTATATACATAAACGGAGTGTGTATCTAGGCTAAAT 17 5678836 0.77576922 5 14 122 0.823529412 0.84509804 0.411764706 0 0 17 2 1 14 3R:5678812-5678868 7 Atg17 FBtr0334946|FBtr0078716 5678800|5678800 5679930|5679930 CTACTTA 7mer-m8 dme-miR-1002-5p 3R + 5678793 5678892 stop_codon Atg17 FlyBase G30533.1 TCCGAGTAGTGTACGACAGTTGGGACTAACATATAACTACTTATATACATAAACGGAGTGTGTATCTAGGCTAAATCTTGTACTCTATGTAGGAACCGCA 22 5678836 0.977926325 8 19 127 0.9 1.431363764 0.366666667 0.318181818 0.5 22 3 0 27 3R:5678793-5678892 7 12 4702 FBgn0037363 1350.75 25.94 39.87666667 0.008883953 0.462606014 0.300927861 -7 -7 -7 0.01 dme-miR-7-5p 6mer2-7 TCTTCC 3R 5679543 5679548 + 3R_5679543_5679548_+ 1 1 1 0 Atg17 FBtr0078716|FBtr0334946 5678800|5678800 5679930|5679930 3R + 5679473 5679564 3'utr Atg17 FlyBase G40434.1 GAAACAAGAAACACAATCTTTTGGGCTCAGCCTGCGAAAAACACAGTTTTATGCTCAGCTTTTACCACTCTCTTCCCCTGACCCTCCAGAAA 11 5679550 0.97039589 6 11 66 1 1.113943352 0.076923077 0.181818182 0.307692308 11 0 0 13 3R:5679473-5679564 6 Atg17 FBtr0334946|FBtr0078716 5678800|5678800 5679930|5679930 TCTTCC 6mer2-7 dme-miR-7-5p 3R + 5679524 5679565 3'utr Atg17 FlyBase G30534.1 TGCTCAGCTTTTACCACTCTCTTCCCCTGACCCTCCAGAAAT 19 5679551 0.975505963 2 17 94 0.903225806 1.447158031 0 0.526315789 0.709677419 19 3 0 28 3R:5679524-5679565 6 13 4703 FBgn0037363 1350.75 25.94 39.87666667 0.009624283 0.501156515 0.326005183 -7 -8 -7.5 0.01 dme-miR-79-3p 6mer2-7 AGCTTT 3R 5712025 5712030 + 3R_5712025_5712030_+ 1 1 1 0 plx FBtr0302092|FBtr0302091|FBtr0334947|FBtr0302090|FBtr0334948 5711955|5711955|5711955|5711955|5711955 5712837|5712837|5712837|5712837|5712837 3R + 5712003 5712101 3'utr plx FlyBase G40454.1 AAGGCCCGCCGGCAGAACGGGCAGCTTTCAAACCCAACGCTACTCATAACCTCTTCTGTTGCGGCTTAGATACGATTAACCCAACCTATAAGATACAAA 40 5712049 0.97420217 10 40 246 1 1.707570176 0.176470588 0.175 0.352941176 40 0 0 51 3R:5712003-5712101 6 plx FBtr0302090|FBtr0334948|FBtr0302091|FBtr0334947|FBtr0302092 5711955|5711955|5711955|5711955|5711955 5712837|5712837|5712837|5712837|5712837 AGCTTT 6mer2-7 dme-miR-79-3p 3R + 5712003 5712074 3'utr plx FlyBase G30546.1 AAGGCCCGCCGGCAGAACGGGCAGCTTTCAAACCCAACGCTACTCATAACCTCTTCTGTTGCGGCTTAGATA 27 5712029 0.978762343 7 23 157 0.847826087 1.113943352 0.282608696 0.444444444 0.673913043 27 5 2 39 3R:5712003-5712074 6 8 4704 FBgn0261261 331.2833333 6.486666667 9.993333333 0.024148513 1.233299075 0.800533689 -24 -4 -14 0.01 dme-miR-970-3p 7mer-A1 CTTATGA 3R 5712599 5712605 + 3R_5712599_5712605_+ 0.823349562 0.823349562 0.823349562 0 plx FBtr0302092|FBtr0302091|FBtr0334947|FBtr0302090|FBtr0334948 5711955|5711955|5711955|5711955|5711955 5712837|5712837|5712837|5712837|5712837 3R + 5712525 5712668 3'utr plx FlyBase G40457.1 TGTATAAAATGATGATACTTGCTTGTACATTGTTCTTGACTAGGATACAACTTTCTGAAATCTCTTTTGTTATGCTTATGATTATGGTATTTGGATTGTATTGATTGTTTACATATACATATATGCGATTATGAACTATAAAAA 126 5712589 0.991335864 20 122 1299 0.974193548 2.178976947 0.574193548 0.174603175 0.329032258 126 4 0 151 3R:5712525-5712668 7 plx FBtr0302090|FBtr0334948|FBtr0302091|FBtr0334947|FBtr0302092 5711955|5711955|5711955|5711955|5711955 5712837|5712837|5712837|5712837|5712837 CTTATGA 7mer-A1 dme-miR-970-3p 3R + 5712547 5712619 3'utr plx FlyBase G30549.1 TTGTACATTGTTCTTGACTAGGATACAACTTTCTGAAATCTCTTTTGTTATGCTTATGATTATGGTATTTGGA 90 5712590 0.69684048 11 88 958 0.978571429 2.136720567 0.4 0.433333333 0.635714286 90 3 0 137 3R:5712547-5712619 7 5.5 4705 FBgn0261261 331.2833333 6.486666667 9.993333333 0.016602103 0.847893114 0.550366911 10 9 9.5 0.01 dme-miR-8-3p 6mer2-7 AGTATT 3R 5745763 5745768 + 3R_5745763_5745768_+ 1 1 1 0 Madm FBtr0078722 5745749 5746862 3R + 5745750 5745795 3'utr Madm FlyBase G40483.1 AAAGTATCAGCTTAGTATTCAGGGCATGCCGGCGCGTATTGTTTTT 9 5745761 0.767541682 4 8 56 0.909090909 1 0.363636364 0.222222222 0.363636364 9 1 0 10 3R:5745750-5745795 6 Madm FBtr0078722 5745749 5746862 AGTATT 6mer2-7 dme-miR-8-3p 3R + 5745752 5745793 3'utr Madm FlyBase G30565.1 AGTATCAGCTTAGTATTCAGGGCATGCCGGCGCGTATTGTTT 5 5745767 0.974262638 5 5 27 1 0.77815125 0.5 0.2 0.333333333 5 0 0 6 3R:5745752-5745793 6 5.5 4706 FBgn0027497 693.01 24.06333333 37.01 0.007936393 0.228563513 0.148608484 2 -4 -1 0.01 dme-miR-12-5p 7mer-m8 AATACTC 3R 5780371 5780377 + 3R_5780371_5780377_+ 0.67451515 0.67451515 0.67451515 0 jagn FBtr0078624|FBtr0078625 5780365|5780365 5781308|5780763 3R + 5780357 5780447 stop_codon jagn FlyBase G40487.1 GTTCCAGTAATCTAAATACTCGCCAAACTAGTAAACGCCGGAATGCAGGGCTAGTTGTAAATAATTTGGAAACTTGAAACTAACTCAAAAC 37 5780373 0.830340841 8 35 177 0.94 1.672097858 0.16 0.243243243 0.44 37 3 0 47 3R:5780357-5780447 7 jagn FBtr0078624|FBtr0078625 5780365|5780365 5781308|5780763 AATACTC 7mer-m8 dme-miR-12-5p 3R + 5780360 5780432 stop_codon jagn FlyBase G30566.1 CCAGTAATCTAAATACTCGCCAAACTAGTAAACGCCGGAATGCAGGGCTAGTTGTAAATAATTTGGAAACTTG 28 5780373 0.996941906 5 27 134 0.975609756 1.602059991 0.097560976 0.25 0.487804878 28 1 0 40 3R:5780360-5780432 7 26.5 4707 FBgn0037374 792.6 64.87666667 99.02 0.033434267 0.408467348 0.267622702 -2 -2 -2 0.01 dme-miR-970-3p 6mer3-8 TCTTAT 3R 5780626 5780631 + 3R_5780626_5780631_+ 1 1 1 0 jagn FBtr0078624|FBtr0078625 5780365|5780365 5781308|5780763 3R + 5780469 5780641 3'utr jagn FlyBase G40488.1 GAAACTATGGTAAACTAAAGTTATGCAGCTGTTAAGGTATCGCACACTTAGTCATACAGGAAGGGAAACATATGGTCGAAACTGAGCGAAGCGTCGGCGGTAAGGTTATTGTTAGTTGAAAGTTAGTTGATACCGTTTTCAAATTGATTAAATAGACTCTTATCCATATACAC 81 5780621 0.986560022 19 78 658 0.98019802 1.51851394 0.089108911 0.222222222 0.376237624 81 0 2 99 3R:5780469-5780641 6 jagn FBtr0078624|FBtr0078625 5780365|5780365 5781308|5780763 TCTTAT 6mer3-8 dme-miR-970-3p 3R + 5780582 5780648 3'utr jagn FlyBase G30568.1 AGTTGAAAGTTAGTTGATACCGTTTTCAAATTGATTAAATAGACTCTTATCCATATACACATGTACA 35 5780621 0.986078145 6 35 295 1 1.662757832 0.043478261 0.285714286 0.456521739 35 0 0 46 3R:5780582-5780648 6 46 4708 FBgn0037374 792.6 64.87666667 99.02 0.058036841 0.709037661 0.464552616 5 5 5 0.01 dme-miR-986-5p 6mer2-7 TTCGAG 3R 5798589 5798594 + 3R_5798589_5798594_+ 0.999999984 0.999464089 0.999732036 0.000378939 CG10979 FBtr0078631|FBtr0335518 5798393|5798393 5798749|5799994 3R + 5798530 5798683 3'utr CG10979 FlyBase G40526.1 AGTGTCCTTATTGTAAAACCAACTAAGCAAGAAACAGAATCCCTAAATGATAAATACGCTTCGAGTATTACGCGGTAAAAACAACCAAAACGAATTGAAAATCGTAGCATAATTTTGGGCTATTAGCAAATGTTTGTTGTTTGTGTGAAAAAGT 58 5798589 0.946079535 18 53 393 0.925373134 1.315270435 0.164179104 0.137931034 0.253731343 58 3 2 62 3R:5798530-5798683 6 CG10979 FBtr0335518|FBtr0078631 5798393|5798393 5799994|5798749 TTCGAG 6mer2-7 dme-miR-986-5p 3R + 5798567 5798611 3'utr CG10979 FlyBase G30589.1 AATCCCTAAATGATAAATACGCTTCGAGTATTACGCGGTAAAAAC 22 5798588 0.774667251 3 21 146 0.941176471 1.505149978 0.088235294 0.318181818 0.558823529 22 2 0 32 3R:5798567-5798611 6 31 4709 FBgn0037379 1005.826667 25.93333333 39.53 0.03082042 1.195372751 0.784214521 0 1 0.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 5798721 5798726 + 3R_5798721_5798726_+ 1 1 1 0 CG10979 FBtr0078631|FBtr0335518 5798393|5798393 5798749|5799994 3R + 5798697 5798777 3'utr CG10979 FlyBase G40527.1 AATGTTATAGTTAATAATGTATATGTACCTAATTTTATAATCCCGCATAAAGTAAAACACGCAAGTGTATACGGTTGTTGA 77 5798720 0.991226121 5 74 782 0.968085106 1.959041392 0.021276596 0.194805195 0.340425532 77 3 0 91 3R:5798697-5798777 6 CG10979 FBtr0335518|FBtr0078631 5798393|5798393 5799994|5798749 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 5798700 5798744 3'utr CG10979 FlyBase G30591.1 GTTATAGTTAATAATGTATATGTACCTAATTTTATAATCCCGCAT 43 5798720 0.814240558 2 42 454 0.98245614 1.748188027 0 0.23255814 0.421052632 43 1 0 56 3R:5798700-5798744 6 58.5 4710 FBgn0037379 1005.826667 25.93333333 39.53 0.058161115 2.255784062 1.479888692 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 3R 5799020 5799027 + 3R_5799020_5799027_+ 0.64356572 0.64356572 0.64356572 0 CG10979 FBtr0335518 5798393 5799994 3R + 5798973 5799046 3'utr CG10979 FlyBase G40528.1 TTGTTGAACTTTTGTTTGCTCGCATTTGTAGGTCTCTTCTAAAGCATACCAAAGAATTACTCTTTGTCGACCAA 17 5799019 0.983384985 7 15 126 0.842105263 0.726998728 0.105263158 0.117647059 0.210526316 17 1 2 16 3R:5798973-5799046 8 CG10979 FBtr0335518 5798393 5799994 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 5798995 5799034 3'utr CG10979 FlyBase G30592.1 CATTTGTAGGTCTCTTCTAAAGCATACCAAAGAATTACTC 7 5799019 0.964070263 2 7 49 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3R:5798995-5799034 8 9.5 4711 FBgn0037379 1005.826667 25.93333333 39.53 0.009444967 0.366323907 0.240323805 1 1 1 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 5799436 5799441 + 3R_5799436_5799441_+ 1 1 1 0 CG10979 FBtr0335518 5798393 5799994 3R + 5799418 5799462 3'utr CG10979 FlyBase G40530.1 AGACATTTGGCAGAGTCCTGATCTACACGAGTGGTTCAACGTATT 8 5799425 0.976524514 4 7 52 0.916666667 1.041392685 0 0.375 0.583333333 8 1 0 11 3R:5799418-5799462 6 CG10979 FBtr0335518 5798393 5799994 TGATCT 6mer3-8 dme-bantam-3p 3R + 5799410 5799466 3'utr CG10979 FlyBase G30593.1 TCCCTCGCAGACATTTGGCAGAGTCCTGATCTACACGAGTGGTTCAACGTATTTATA 8 5799437 0.96422517 5 8 47 1 1.230448921 0.117647059 0.625 0.823529412 8 0 0 17 3R:5799410-5799466 6 7.5 4712 FBgn0037379 1005.826667 25.93333333 39.53 0.007456553 0.289203085 0.18972932 11 -1 5 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3R 5826342 5826348 + 3R_5826342_5826348_+ 0.521223855 0.521223855 0.521223855 0 dgrn FBtr0078638|FBtr0078639|FBtr0344116 5826237|5826237|5826237 5826576|5826576|5826576 3R + 5826284 5826402 3'utr dgrn FlyBase G40537.1 AATATAGTTTAAAAAAAAACGCTTAACTATGTTAGAGACGGCAAATAATGTCTGTTCTTGTGATTCAGAAAAAATTAGTTATTTAAGTTGTCCTATGTAATCAGTGGCGCCCAAAAATA 83 5826341 0.99890242 16 73 711 0.871287129 1.467361417 0.297029703 0.168674699 0.316831683 83 11 2 88 3R:5826284-5826402 7 dgrn FBtr0078638|FBtr0078639|FBtr0344116 5826237|5826237|5826237 5826576|5826576|5826576 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 5826258 5826373 3'utr dgrn FlyBase G30596.1 ATTTTTTGCTCTGTGAGCCTTAATATAATATAGTTTAAAAAAAAACGCTTAACTATGTTAGAGACGGCAAATAATGTCTGTTCTTGTGATTCAGAAAAAATTAGTTATTTAAGTTG 48 5826341 0.802247247 13 43 434 0.925373134 1.315270435 0.208955224 0.270833333 0.47761194 48 3 2 62 3R:5826258-5826373 7 48.5 4713 FBgn0037384 485 36.97 56.92333333 0.1 1.311874493 0.852023189 1 1 1 0.01 dme-miR-980-5p 7mer-m1 AAAAACT 3R 5826418 5826424 + 3R_5826418_5826424_+ 0.765586663 0.76557478 0.765580721 8.41E-06 dgrn FBtr0078638|FBtr0078639|FBtr0344116 5826237|5826237|5826237 5826576|5826576|5826576 3R + 5826408 5826507 3'utr dgrn FlyBase G40538.1 ATACAACTATAAAAACTAAAGACTTCACTTTTGATGTATGAAACCATCTCAGGCTAGAATAATATAAGAACGACCGAAAGGAGTGTCAAAGTATTATGTA 24 5826417 0.969442467 10 23 131 1 1.414973348 0.115384615 0.083333333 0.153846154 24 0 0 26 3R:5826408-5826507 7 dgrn FBtr0078638|FBtr0078639|FBtr0344116 5826237|5826237|5826237 5826576|5826576|5826576 AAAAACT 7mer-m1 dme-miR-980-5p 3R + 5826410 5826473 3'utr dgrn FlyBase G30597.1 ACAACTATAAAAACTAAAGACTTCACTTTTGATGTATGAAACCATCTCAGGCTAGAATAATATA 14 5826416 0.715671358 9 13 65 0.863636364 0.67669361 0.136363636 0.5 0.681818182 14 0 3 19 3R:5826410-5826473 7 11.5 4714 FBgn0037384 485 36.97 56.92333333 0.02371134 0.311063024 0.202026117 1 2 1.5 0.01 dme-miR-252-5p 6mer3-8 GTACTT 3R 5849755 5849760 - 3R_5849755_5849760_- 1 1 1 0 disp FBtr0078665 5849695 5850520 3R - 5849705 5849811 3'utr disp FlyBase G48473.1 TTATATCCCTAAACAATGACGTATTGTAATTACCTGCAACAAAATGGCCCTGTACTTCCTTCATTGAACTTATGTGTTGAAGTGATTTAATAAATGTTACTTGTAAA 19 5849767 0.982057104 10 19 146 1 1.301029996 0.05 0.052631579 0.1 19 0 0 20 3R:5849705-5849811 6 disp FBtr0078665 5849695 5850520 GTACTT 6mer3-8 dme-miR-252-5p 3R - 5849749 5849782 3'utr disp FlyBase G36593.1 TTACCTGCAACAAAATGGCCCTGTACTTCCTTCA 13 5849767 0.914084898 3 12 78 1 1.278753601 0.263157895 0.384615385 0.578947368 13 0 0 19 3R:5849749-5849782 6 12.5 4715 FBgn0029088 548.99 13.48 20.58 0.022769085 0.927299703 0.607385811 7 7 7 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 5849859 5849866 - 3R_5849859_5849866_- 0.650171355 0.650171355 0.650171355 0 disp FBtr0078665|FBtr0078665|FBtr0078665 5849695|5849695|5849695 5850520|5850520|5850520 3R - 5849838 5849887 3'utr disp FlyBase G48474.1 ACGTTTGTAATAACCATGTAACTGTGATACAGAAGGTGAGAATCTTAATG 23 5849869 0.710328348 5 19 140 0.807692308 1.322219295 0.076923077 0.130434783 0.230769231 23 5 0 21 3R:5849838-5849887 8 disp FBtr0078665|FBtr0078665|FBtr0078665 5849695|5849695|5849695 5850520|5850520|5850520 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 5849806 5849897 3'utr disp FlyBase G36594.1 ACACACGCTCACGTTTGTAATAACCATGTAACTGTGATACAGAAGGTGAGAATCTTAATGAAATTGGTGTTTATACAGACATAGTGTTATAT 28 5849870 0.989007898 9 18 178 0.684210526 0.812913357 0.157894737 0.296296296 0.5 27 9 3 26 3R:5849806-5849897 8 22 4716 FBgn0029088 548.99 13.48 20.58 0.04007359 1.632047478 1.068999028 3 4 3.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 6000820 6000826 - 3R_6000820_6000826_- 0.754178797 0.754178804 0.7541788 0 Rm62 FBtr0309321|FBtr0309321|FBtr0309321|FBtr0078653|FBtr0078653|FBtr0078653|FBtr0078650|FBtr0078650|FBtr0078650|FBtr0078651|FBtr0078651|FBtr0078651|FBtr0302597|FBtr0302597|FBtr0302597|FBtr0309322|FBtr0309322|FBtr0309322|FBtr0078654|FBtr0078654|FBtr0078654|FBtr0309320|FBtr0309320|FBtr0309320|FBtr0078649|FBtr0078649|FBtr0078649|FBtr0301947|FBtr0301947|FBtr0301947|FBtr0078652|FBtr0078652|FBtr0078652|FBtr0309319|FBtr0309319|FBtr0309319 6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000424|6000424|6000424|6000429|6000429|6000429|6000429|6000429|6000429|6000424|6000424|6000424|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429 6003027|6003027|6003027|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6002635|6002635|6002635|6001162|6001162|6001162|6002646|6002646|6002646|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6003646|6003646|6003646 3R - 6000799 6000924 3'utr Rm62 FlyBase G48504.2 AAGTTATTTGACGCTGGCCGCGAGGTCGGTACAACACAATCCAATTGAGAACATCAAAAACACTTTACTTAAACGCAAAAACCAATTTTCAAATATCATGTGATAATTTCTTAATTTAACGCAACG 195 6000829 0.807415952 23 177 1847 0.918103448 1.629409599 0.043103448 0.174358974 0.306034483 195 15 4 213 3R:6000799-6000924 7 Rm62 FBtr0078654|FBtr0078654|FBtr0078654|FBtr0309320|FBtr0309320|FBtr0309320|FBtr0301947|FBtr0301947|FBtr0301947|FBtr0078649|FBtr0078649|FBtr0078649|FBtr0309319|FBtr0309319|FBtr0309319|FBtr0078652|FBtr0078652|FBtr0078652|FBtr0309321|FBtr0309321|FBtr0309321|FBtr0078650|FBtr0078650|FBtr0078650|FBtr0078651|FBtr0078651|FBtr0078651|FBtr0302597|FBtr0302597|FBtr0302597|FBtr0078653|FBtr0078653|FBtr0078653|FBtr0309322|FBtr0309322|FBtr0309322 6000429|6000429|6000429|6000424|6000424|6000424|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000424|6000424|6000424|6000429|6000429|6000429|6000429|6000429|6000429 6001162|6001162|6001162|6002646|6002646|6002646|6001162|6001162|6001162|6001162|6001162|6001162|6003646|6003646|6003646|6001162|6001162|6001162|6003027|6003027|6003027|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6002635|6002635|6002635 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 6000802 6000878 3'utr Rm62 FlyBase G36612.1 GAGAACATCAAAAACACTTTACTTAAACGCAAAAACCAATTTTCAAATATCATGTGATAATTTCTTAATTTAACGCA 138 6000830 0.776641012 15 123 1287 0.893939394 1.946943271 0.065656566 0.369565217 0.560606061 138 20 1 177 3R:6000802-6000878 7 145.5 4717 FBgn0003261 4149.96 168.6633333 258.5433333 0.035060579 0.86266527 0.56276833 3 4 3.5 0.01 dme-miR-1002-5p 6mer3-8 CTACTT 3R 6001037 6001042 - 3R_6001037_6001042_- 0.999819213 0.998202536 0.999010874 0.00114318 Rm62 FBtr0309321|FBtr0078653|FBtr0078650|FBtr0078651|FBtr0302597|FBtr0309322|FBtr0078654|FBtr0309320|FBtr0078649|FBtr0301947|FBtr0078652|FBtr0309319 6000429|6000429|6000429|6000429|6000424|6000429|6000429|6000424|6000429|6000429|6000429|6000429 6003027|6001162|6001162|6001162|6001162|6002635|6001162|6002646|6001162|6001162|6001162|6003646 3R - 6000934 6001232 3'utr Rm62 FlyBase G48505.1 GAGCAACGGACGAGGCTTCGGAGGAGGCGGCGGCGGCGGCGGCGAAGGCAGACACTCGCGCTTCGACTAGATCGCGGACAATTAGATGAGCAGTAAAAGAAGCTATAGGAACAGGAGATTTCAGTAGCTAAACTAAACCGCACTAGGTCCTAAGTTAAATTAAGTTCATAGCTTAAGTTAAGATTTCGTACTACTTTCACCAAACCGCTGACGGTTATTTTTAGACTTAAATTCAGACTCCCTGATTAATGAAACACTACAAAATGCGAGCTATTTGAACATAGCGAATTTATGTTTAA 348 6001037 0.983484194 54 331 2553 0.95754717 2.307496038 0.169811321 0.189655172 0.33490566 348 17 1 406 3R:6000934-6001232 6 Rm62 FBtr0078654|FBtr0309320|FBtr0301947|FBtr0078649|FBtr0309319|FBtr0078652|FBtr0309321|FBtr0078650|FBtr0078651|FBtr0302597|FBtr0078653|FBtr0309322 6000429|6000424|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000424|6000429|6000429 6001162|6002646|6001162|6001162|6003646|6001162|6003027|6001162|6001162|6001162|6001162|6002635 CTACTT 6mer3-8 dme-miR-1002-5p 3R - 6000888 6001190 3'utr Rm62 FlyBase G36612.2 CGAAGGCAGACACTCGCGCTTCGACTAGATCGCGGACAATTAGATGAGCAGTAAAAGAAGCTATAGGAACAGGAGATTTCAGTAGCTAAACTAAACCGCACTAGGTCCTAAGTTAAATTAAGTTCATAGCTTAAGTTAAGATTTCGTACTACTTTCACCAAACCGCTGACGGTTATTTTTAGACTTAAATTCAGACTCCCTGATTAATGAAACACTACAAAATGCGAGCTATTTGAACATAGCGAATTTATGTTTAAATGATTTGTAAGTTATTTGACGCTGGCCGCGAGGTCGGTACAACAC 251 6001037 0.92983781 46 229 1764 0.910994764 1.696481204 0.193717277 0.362549801 0.581151832 251 28 6 348 3R:6000888-6001190 6 129 4718 FBgn0003261 4149.96 168.6633333 258.5433333 0.031084637 0.76483725 0.498949241 -5 -5 -5 0.01 dme-miR-33-5p 6mer3-8 CAATGC 3R 6001604 6001609 - 3R_6001604_6001609_- 1 1 1 0 Rm62 FBtr0309321|FBtr0309322|FBtr0309320|FBtr0309319 6000429|6000429|6000424|6000429 6003027|6002635|6002646|6003646 3R - 6001560 6001646 5'utr Rm62 FlyBase G48507.1 ACACAAAGGGCACCTCTTTCGCCTTCTTCACCAAGAACAATGCCAAGCAAGCCAAGGCGCTGGTCGACGTACTCCGAGAAGCTAATC 19 6001606 0.950158793 9 17 77 0.863636364 1.278753601 0.045454545 0.157894737 0.272727273 19 3 0 19 3R:6001560-6001646 6 Rm62 FBtr0309320|FBtr0309319|FBtr0309321|FBtr0309322 6000424|6000429|6000429|6000429 6002646|6003646|6003027|6002635 CAATGC 6mer3-8 dme-miR-33-5p 3R - 6001570 6001652 5'utr Rm62 FlyBase G36613.1 GATCCAACACAAAGGGCACCTCTTTCGCCTTCTTCACCAAGAACAATGCCAAGCAAGCCAAGGCGCTGGTCGACGTACTCCGA 11 6001620 0.934921823 5 10 38 0.866666667 1.113943352 0.133333333 0.363636364 0.533333333 11 2 0 13 3R:6001570-6001652 6 6.5 4719 FBgn0003261 4149.96 168.6633333 258.5433333 0.00156628 0.038538311 0.025140853 -3 11 4 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 6359603 6359608 + 3R_6359603_6359608_+ 1 1 1 0 Pak FBtr0334543|FBtr0334544|FBtr0081716|FBtr0334539|FBtr0334542|FBtr0081714|FBtr0334540|FBtr0081715|FBtr0334541 6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464 6361614|6361614|6360248|6360248|6361614|6360248|6360248|6360248|6360050 3R + 6359557 6359637 3'utr Pak FlyBase G40562.1 AACACCAACCACAATAGCAACAATAACTGTTATGCATACGAACAGATGATGAATTATTAATGATTATGAGTACTATTATTA 14 6359603 0.974891896 7 14 84 1 1.322219295 0.047619048 0.428571429 0.619047619 14 0 0 21 3R:6359557-6359637 6 Pak FBtr0081715|FBtr0334541|FBtr0081714|FBtr0334540|FBtr0334539|FBtr0334542|FBtr0334543|FBtr0334544|FBtr0081716 6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464 6360248|6360050|6360248|6360248|6360248|6361614|6361614|6361614|6360248 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R + 6359554 6359644 3'utr Pak FlyBase G30615.1 AACAACACCAACCACAATAGCAACAATAACTGTTATGCATACGAACAGATGATGAATTATTAATGATTATGAGTACTATTATTAATTATTT 7 6359603 0.97256129 5 7 48 1 1.079181246 0.083333333 0.571428571 0.75 7 0 0 12 3R:6359554-6359644 6 7 4720 FBgn0267698 1697.123333 60.89666667 93.02666667 0.004124627 0.11494882 0.075247241 0 0 0 0.01 dme-miR-31a-5p 6mer3-8 TCTTGC 3R 6360003 6360008 + 3R_6360003_6360008_+ 0.864559059 0.548950222 0.706754641 0.223169193 Pak FBtr0334543|FBtr0334544|FBtr0081716|FBtr0334539|FBtr0334542|FBtr0081714|FBtr0334540|FBtr0081715|FBtr0334541 6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464 6361614|6361614|6360248|6360248|6361614|6360248|6360248|6360248|6360050 3R + 6359958 6360028 3'utr Pak FlyBase G40564.1 CACACACACTATAGTTGTCAACATTAAAACATTAGAATTTGTAACTCTTGCATTTAAAGGAAATGAAAATA 121 6360005 0.767290277 6 120 962 0.993710692 2.198657087 0.528301887 0.223140496 0.408805031 121 1 0 158 3R:6359958-6360028 6 Pak FBtr0081715|FBtr0334541|FBtr0081714|FBtr0334540|FBtr0334539|FBtr0334542|FBtr0334543|FBtr0334544|FBtr0081716 6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464 6360248|6360050|6360248|6360248|6360248|6361614|6361614|6361614|6360248 TCTTGC 6mer3-8 dme-miR-31a-5p 3R + 6359989 6360028 3'utr Pak FlyBase G30616.1 TTAGAATTTGTAACTCTTGCATTTAAAGGAAATGAAAATA 84 6360005 0.751355944 5 84 635 1 2.100370545 0.595238095 0.345238095 0.563492063 84 0 0 126 3R:6359989-6360028 6 100 4721 FBgn0267698 1697.123333 60.89666667 93.02666667 0.058923237 1.642126006 1.074960585 -2 -2 -2 0.01 dme-miR-283-5p 6mer3-8 TGATAT 3R 6360117 6360122 + 3R_6360117_6360122_+ 1 1 1 0 Pak FBtr0334543|FBtr0334544|FBtr0081716|FBtr0334539|FBtr0334542|FBtr0081714|FBtr0334540|FBtr0081715 6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464 6361614|6361614|6360248|6360248|6361614|6360248|6360248|6360248 3R + 6360106 6360229 3'utr Pak FlyBase G40565.1 TTACAAAATAATGATATGAGAGTATGAACTTTGGAACGCTGTTACTAACCCTATGACTTGGAGTATTATCGCTGATTTTAGTAAAAGTTTCATTTAGTTCATAAACTGCTTTATTTAATAAAAA 90 6360136 0.751492921 12 88 627 0.981818182 2.033423755 0.172727273 0.2 0.345454545 90 2 0 108 3R:6360106-6360229 6 Pak FBtr0081715|FBtr0081714|FBtr0334540|FBtr0334539|FBtr0334542|FBtr0334543|FBtr0334544|FBtr0081716 6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464 6360248|6360248|6360248|6360248|6361614|6361614|6361614|6360248 TGATAT 6mer3-8 dme-miR-283-5p 3R + 6360108 6360188 3'utr Pak FlyBase G30617.1 ACAAAATAATGATATGAGAGTATGAACTTTGGAACGCTGTTACTAACCCTATGACTTGGAGTATTATCGCTGATTTTAGTA 47 6360136 0.705548097 10 47 298 1 1.886490725 0.194805195 0.446808511 0.662337662 47 0 0 77 3R:6360108-6360188 6 46.5 4722 FBgn0267698 1697.123333 60.89666667 93.02666667 0.027399305 0.763588593 0.499856672 -19 -19 -19 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 6377774 6377779 - 3R_6377774_6377779_- 1 1 1 0 CG1024 FBtr0332176|FBtr0332175 6377347|6377347 6378179|6378469 3R - 6377737 6377799 3'utr CG1024 FlyBase G48545.1 GAGGGTCGACTTGATATGACTGATCTGTAAAACGATGGACTTATATAGGGGCGGCTGCCAACA 47 6377764 0.942776403 5 41 267 0.887096774 1.740362689 0.112903226 0.234042553 0.419354839 47 7 0 55 3R:6377737-6377799 6 CG1024 FBtr0332176|FBtr0332175 6377347|6377347 6378179|6378469 TGATCT 6mer3-8 dme-bantam-3p 3R - 6377735 6377802 3'utr CG1024 FlyBase G36638.1 TTGGAGGGTCGACTTGATATGACTGATCTGTAAAACGATGGACTTATATAGGGGCGGCTGCCAACATT 43 6377764 0.916716648 7 42 262 0.983333333 1.770852012 0.233333333 0.302325581 0.5 43 1 0 59 3R:6377735-6377802 6 26 4723 FBgn0027514 261.6666667 14.94666667 22.81333333 0.099363057 1.739518287 1.139684395 -15 -15 -15 0.01 dme-miR-2a-2-5p 7mer-A1 GATGAGA 3R 6387375 6387381 + 3R_6387375_6387381_+ 0.782911824 0.782911824 0.782911824 0 godzilla FBtr0081721|FBtr0081720|FBtr0113198|FBtr0081722 6387311|6387311|6387311|6387311 6388304|6387789|6388304|6388304 3R + 6387282 6387401 stop_codon godzilla FlyBase G40600.1 CAGCGCATCCGATCGCCAGTTTCTCATATGAGGCGAGCTAGTTCGCCGCGAGTCCTTAGCCTGTAGGTTGTAGGTGGTCGTCGATCCTTGAGAGATGAGACATGAGCCCAGCCTGGGTAC 171 6387377 0.959577819 14 166 776 0.970588235 1.819543936 0.416666667 0.152046784 0.289215686 171 4 2 198 3R:6387282-6387401 7 godzilla FBtr0081722|FBtr0113198|FBtr0081720|FBtr0081721 6387311|6387311|6387311|6387311 6388304|6388304|6387789|6388304 GATGAGA 7mer-A1 dme-miR-2a-2-5p 3R + 6387292 6387402 stop_codon godzilla FlyBase G30640.1 GATCGCCAGTTTCTCATATGAGGCGAGCTAGTTCGCCGCGAGTCCTTAGCCTGTAGGTTGTAGGTGGTCGTCGATCCTTGAGAGATGAGACATGAGCCCAGCCTGGGTACG 132 6387377 0.950809593 13 130 640 0.981220657 2.320146286 0.408450704 0.431818182 0.647887324 132 4 0 209 3R:6387292-6387402 7 99 4724 FBgn0037442 1202.333333 48.23 73.77 0.082339895 2.052664317 1.342008947 -2 -2 -2 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3R 6387608 6387614 + 3R_6387608_6387614_+ 0.521223855 0.521223855 0.521223855 0 godzilla FBtr0081721|FBtr0081720|FBtr0113198|FBtr0081722 6387311|6387311|6387311|6387311 6388304|6387789|6388304|6388304 3R + 6387555 6387641 3'utr godzilla FlyBase G40601.1 AATCCACACAGACACGATACACACACACGCGTCATTTATGTGCGTATAGAAATTGTGATTTATTTTATATACATTTTACAATTAACC 725 6387614 0.991288275 16 718 7646 0.992027335 2.4628969 0.002277904 0.172413793 0.316628702 725 5 2 871 3R:6387555-6387641 7 godzilla FBtr0081722|FBtr0113198|FBtr0081720|FBtr0081721 6387311|6387311|6387311|6387311 6388304|6388304|6387789|6388304 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 6387570 6387632 3'utr godzilla FlyBase G30642.1 GATACACACACACGCGTCATTTATGTGCGTATAGAAATTGTGATTTATTTTATATACATTTTA 452 6387614 0.991809986 15 435 4792 0.958778626 1.651831608 0 0.340707965 0.545038168 452 14 13 628 3R:6387570-6387632 7 585.5 4725 FBgn0037442 1202.333333 48.23 73.77 0.486969781 12.13974705 7.93683069 -6 -6 -6 0.01 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 3R 6387752 6387758 + 3R_6387752_6387758_+ 0.823349562 0.823349562 0.823349562 0 godzilla FBtr0081721|FBtr0081720|FBtr0113198|FBtr0081722 6387311|6387311|6387311|6387311 6388304|6387789|6388304|6388304 3R + 6387656 6387779 3'utr godzilla FlyBase G40602.1 CGAAATACAGCCTCGCCGGCAAACTCCCAACCAAAAATGTAAACGATAGATGGAAGAGAAAAAATACCAAGTTACCACATCTAAGATTAAATTGTTTACCTGATTCGCATGAATCTTTGATTCA 34 6387759 0.907605931 15 34 184 1 1.633468456 0.139534884 0.205882353 0.372093023 34 0 0 43 3R:6387656-6387779 7 godzilla FBtr0081722|FBtr0113198|FBtr0081720|FBtr0081721 6387311|6387311|6387311|6387311 6388304|6388304|6387789|6388304 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R + 6387664 6387765 3'utr godzilla FlyBase G30643.1 AGCCTCGCCGGCAAACTCCCAACCAAAAATGTAAACGATAGATGGAAGAGAAAAAATACCAAGTTACCACATCTAAGATTAAATTGTTTACCTGATTCGCAT 19 6387759 0.978322026 6 17 109 0.931034483 1.130333768 0.482758621 0.368421053 0.586206897 19 1 1 27 3R:6387664-6387765 7 12.5 4726 FBgn0037442 1202.333333 48.23 73.77 0.010396451 0.259174787 0.169445574 -7 -7 -7 0.01 dme-miR-282-5p 6mer3-8 AGAGGC 3R 6387952 6387957 + 3R_6387952_6387957_+ 1 1 1 0 godzilla FBtr0081721|FBtr0113198|FBtr0081722 6387311|6387311|6387311 6388304|6388304|6388304 3R + 6387934 6387974 3'utr godzilla FlyBase G40604.1 AATTAAATCAAATGATTGAGAGGCACTGGCCTGTATATTGT 10 6387960 0.968610025 3 10 55 1 1.113943352 0.153846154 0.3 0.461538462 10 0 0 13 3R:6387934-6387974 6 godzilla FBtr0081722|FBtr0113198|FBtr0081721 6387311|6387311|6387311 6388304|6388304|6388304 AGAGGC 6mer3-8 dme-miR-282-5p 3R + 6387946 6387994 3'utr godzilla FlyBase G30644.1 TGATTGAGAGGCACTGGCCTGTATATTGTACATTATTCTCGTTTTAACT 6 6387960 0.996910192 3 6 49 1 0.77815125 0.166666667 0 0 6 0 0 6 3R:6387946-6387994 6 6 4727 FBgn0037442 1202.333333 48.23 73.77 0.004990297 0.124403898 0.081333876 -8 -8 -8 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3R 6447771 6447776 + 3R_6447771_6447776_+ 0.999988749 1 0.999994375 7.99E-06 gpp FBtr0303790|FBtr0303789 6445700|6447492 6449274|6448007 3R + 6447606 6447792 3'utr gpp FlyBase G40636.1 CGGATCGGATCCCGGATCCTCGGAATTGTAATGTATTTGATAAAAGATTTTTTGTAATTTTAACTAAATGAATTGTGTATGACTAGCTAACTTATTGTAAGGCCCAGCTCTCCAATTGCCTTGTTTTATTTGATAATTACTATCCAACAGCTCCCCTTTCACCAGTGTGTTTTTATTTCATTAATAA 60 6447771 0.822785208 21 58 501 0.970149254 1.511883361 0.253731343 0.116666667 0.208955224 60 1 1 65 3R:6447606-6447792 6 gpp FBtr0303789|FBtr0303790 6447492|6445700 6448007|6449274 TGTGTT 6mer3-8 dme-miR-317-3p 3R + 6447749 6447790 3'utr gpp FlyBase G30671.1 CCAACAGCTCCCCTTTCACCAGTGTGTTTTTATTTCATTAAT 13 6447772 0.735392747 5 12 139 0.954545455 1.322219295 0 0.461538462 0.681818182 13 1 0 21 3R:6447749-6447790 6 12.5 4728 FBgn0264495 828.5133333 12.03333333 18.53 0.015087265 1.038781163 0.674581759 0 -1 -0.5 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 6447860 6447865 + 3R_6447860_6447865_+ 1 1 1 0 gpp FBtr0303790|FBtr0303789 6445700|6447492 6449274|6448007 3R + 6447836 6447906 3'utr gpp FlyBase G40637.1 TGAACCGGAAAAACGCAACTGCGCTGATGAACAATGTTACTGATTTCTTTGTACCGATTACCAATTACTAT 47 6447855 0.976736682 12 44 277 0.947368421 1.73239376 0.105263158 0.170212766 0.315789474 47 3 0 54 3R:6447836-6447906 6 gpp FBtr0303789|FBtr0303790 6447492|6445700 6448007|6449274 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R + 6447824 6447905 3'utr gpp FlyBase G30672.1 ACTTTATAACGTTGAACCGGAAAAACGCAACTGCGCTGATGAACAATGTTACTGATTTCTTTGTACCGATTACCAATTACTA 41 6447855 0.998770437 12 40 211 1 1.812913357 0.215384615 0.390243902 0.615384615 41 0 0 65 3R:6447824-6447905 6 33.5 4729 FBgn0264495 828.5133333 12.03333333 18.53 0.04043387 2.783933518 1.807879115 5 5 5 0.01 dme-miR-7-5p 6mer2-7 TCTTCC 3R 6451458 6451463 - 3R_6451458_6451463_- 1 1 1 0 CG9727 FBtr0330193 6449942 6451848 3R - 6451310 6451483 3'utr CG9727 FlyBase G48570.1 AAACCCTCAACAAAATCCAATCTTCCCTCTGTTTAAACTAATCAACAGCTTAACTGTGCCTCTTATTGGTTTCAAAAGTGTCCAACATCATTAGAGGTGTGAGCTTGAGCCGACTTCTTTAATCTAACGTTACCCTCAGGCCTTGTTGTATGTATGCAATTGGCATATTGTTAT 23 6451461 0.976584383 13 23 157 1 1.414973348 0.038461538 0.130434783 0.230769231 23 0 0 26 3R:6451310-6451483 6 CG9727 FBtr0330193 6449942 6451848 TCTTCC 6mer2-7 dme-miR-7-5p 3R - 6451395 6451476 3'utr CG9727 FlyBase G36653.1 CAACAAAATCCAATCTTCCCTCTGTTTAAACTAATCAACAGCTTAACTGTGCCTCTTATTGGTTTCAAAAGTGTCCAACATC 13 6451461 0.984460764 5 13 104 1 1.301029996 0 0.384615385 0.6 13 0 0 20 3R:6451395-6451476 6 9 4730 FBgn0037445 1232.88 23.59333333 36.24666667 0.007299981 0.38146369 0.248298694 -2 -2 -2 0.01 dme-miR-8-3p 7mer-m8 CAGTATT 3R 6656115 6656121 - 3R_6656115_6656121_- 0.661615243 0.661615243 0.661615243 0 CG1307 FBtr0346140 6656028 6656521 3R - 6656101 6656131 3'utr CG1307 FlyBase G48587.1 TAGCTTCCCACAGTATTTGGTCTATTTCTTT 8 6656114 0.675549767 2 8 67 1 1.113943352 0 0.5 0.692307692 8 0 0 13 3R:6656101-6656131 7 CG1307 FBtr0346140 6656028 6656521 CAGTATT 7mer-m8 dme-miR-8-3p 3R - 6656108 6656141 3'utr CG1307 FlyBase G36663.1 AGATTATATCTAGCTTCCCACAGTATTTGGTCTA 11 6656114 0.665627361 3 11 88 1 1.342422681 0.090909091 0.636363636 0.818181818 11 0 0 22 3R:6656108-6656141 7 9.5 4731 FBgn0026566 301 40.07666667 61.29666667 0.031561462 0.237045662 0.154983958 -7 -7 -7 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 6656385 6656390 - 3R_6656385_6656390_- 1 1 1 0 CG1307 FBtr0346140|FBtr0346140|FBtr0346140|FBtr0301623|FBtr0301623|FBtr0301623|FBtr0339933|FBtr0339933|FBtr0339933 6656028|6656028|6656028|6656288|6656288|6656288|6656288|6656288|6656288 6656521|6656521|6656521|6656521|6656521|6656521|6656521|6656521|6656521 3R - 6656357 6656412 3'utr CG1307 FlyBase G48589.2 AAGGCCACCGGGTGGAGGACGACTGTGACATGCAAGCTAAGCTAAGATTTACGTTA 39 6656383 0.817325859 3 37 131 0.977272727 1.33243846 0.431818182 0.102564103 0.204545455 39 0 1 43 3R:6656357-6656412 6 CG1307 FBtr0339933|FBtr0339933|FBtr0339933|FBtr0346140|FBtr0346140|FBtr0346140|FBtr0301623|FBtr0301623|FBtr0301623 6656288|6656288|6656288|6656028|6656028|6656028|6656288|6656288|6656288 6656521|6656521|6656521|6656521|6656521|6656521|6656521|6656521|6656521 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 6656367 6656412 3'utr CG1307 FlyBase G36665.1 AAGGCCACCGGGTGGAGGACGACTGTGACATGCAAGCTAAGCTAAG 23 6656385 0.755450089 3 23 73 1 1.51851394 0.454545455 0.347826087 0.545454545 23 0 0 33 3R:6656367-6656412 6 30 4732 FBgn0026566 301 40.07666667 61.29666667 0.099667774 0.74856525 0.489423025 -7 -5 -6 0.01 dme-miR-970-3p 6mer3-8 TCTTAT 3R 6659303 6659308 + 3R_6659303_6659308_+ 1 1 1 0 twr FBtr0081687 6659291 6659442 3R + 6659260 6659322 stop_codon twr FlyBase G40671.1 TTGGCCATTTTCGTGCTGCTGCATCGGGAGTAGATGGGATCGCTCTTATTTTGTAGGTACAGT 43 6659305 0.970587357 9 42 326 0.980769231 1.707570176 0.115384615 0.162790698 0.307692308 43 1 0 51 3R:6659260-6659322 6 twr FBtr0081687 6659291 6659442 TCTTAT 6mer3-8 dme-miR-970-3p 3R + 6659276 6659383 stop_codon twr FlyBase G30697.2 TGCTGCATCGGGAGTAGATGGGATCGCTCTTATTTTGTAGGTACAGTTTATAAGTAGGAAGTGCACAATCTCGAGCCTGTCTGCATTTTCAAATTCCTTACCACCCCA 31 6659305 0.986210845 9 29 229 0.975609756 1.602059991 0.195121951 0.225806452 0.414634146 31 1 0 40 3R:6659276-6659383 6 31 4733 FBgn0262801 451 66.07666667 100.2333333 0.068736142 0.469151995 0.309278351 -2 -2 -2 0.01 dme-miR-307a-3p 6mer3-8 GGTTGT 3R 7071118 7071123 + 3R_7071118_7071123_+ 1 1 1 0 CG1965 FBtr0305315|FBtr0334667 7069195|7068710 7071624|7071624 3R + 7071002 7071129 3'utr CG1965 FlyBase G40693.1 TGAGCTGGCGATTGGAGCCCTTCTGAATCGTTACCTGTTATTAGCTATGCGAGTCTGCACGCCAAACGATGCCATAAACAAAGCTTACATCATTGTAAATACCCTGCCTACAGTCTGGTTGTTACCGA 21 7071101 0.982783051 13 21 157 1 1.447158031 0.464285714 0.19047619 0.392857143 21 0 0 28 3R:7071002-7071129 6 CG1965 FBtr0334667|FBtr0305315 7068710|7069195 7071624|7071624 GGTTGT 6mer3-8 dme-miR-307a-3p 3R + 7071093 7071124 3'utr CG1965 FlyBase G30716.1 ATTGTAAATACCCTGCCTACAGTCTGGTTGTT 5 7071101 0.804742438 2 5 30 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 3R:7071093-7071124 6 5.5 4734 FBgn0037466 426.6666667 16.45666667 25.25333333 0.012890625 0.334211059 0.217793031 17 17 17 0.01 dme-miR-305-3p 6mer2-7 TGTGCC 3R 7077298 7077303 + 3R_7077298_7077303_+ 1 1 1 0 CG1943 FBtr0334668 7077274 7077981 3R + 7077202 7077341 stop_codon CG1943 FlyBase G40698.1 AACCAGCGGCCACAAATGGAGAGGCACGCGGCCGAGTTCCACCCGGCGGATTCTCGTCGGGCGGATTCTGGTAGAGGGAGGAAGGAGGGAAGGAAGTGTGCCCGGGAGCAGAAGCAGCTGCCAAGCATTTAATGACTCAC 491 7077300 0.927344079 12 469 715 0.972627737 1.823637222 0.386861314 0.097759674 0.191605839 491 8 7 533 3R:7077202-7077341 6 CG1943 FBtr0334668 7077274 7077981 TGTGCC 6mer2-7 dme-miR-305-3p 3R + 7077273 7077411 stop_codon CG1943 FlyBase G30722.1 TAGAGGGAGGAAGGAGGGAAGGAAGTGTGCCCGGGAGCAGAAGCAGCTGCCAAGCATTTAATGACTCACCATCACATCCTCAGACCGACATAAGAATCATAAAACTATAAATATACATAACTCGCTTATAACATACGTA 385 7077300 0.92151699 14 379 672 0.98630137 2.158362492 0.356164384 0.363636364 0.580479452 385 5 3 576 3R:7077273-7077411 6 373.5 4735 FBgn0037468 4211.24 509.6133333 779.24 0.088691217 0.73290861 0.479313177 -2 -2 -2 0.01 dme-miR-986-5p 6mer3-8 ATTCGA 3R 7077895 7077900 + 3R_7077895_7077900_+ 0.999997756 0.999997953 0.999997855 1.41E-07 CG1943 FBtr0334668 7077274 7077981 3R + 7077892 7077998 3'utr CG1943 FlyBase G40700.1 ACAATTCGATTTGGTCACGAAATTAATTCTAGTATTTATTACAATTCAGTTTAATTTGACAAGGTCCATCAATTTATCGTCGAACTTGATAAAGCGCATTTCTAAAT 91 7077902 0.98204002 11 84 636 0.932773109 1.267171728 0.033613445 0.230769231 0.411764706 91 3 5 111 3R:7077892-7077998 6 CG1943 FBtr0334668 7077274 7077981 ATTCGA 6mer3-8 dme-miR-986-5p 3R + 7077891 7077988 3'utr CG1943 FlyBase G30724.1 TACAATTCGATTTGGTCACGAAATTAATTCTAGTATTTATTACAATTCAGTTTAATTTGACAAGGTCCATCAATTTATCGTCGAACTTGATAAAGCGC 42 7077902 0.981940434 9 41 305 0.982758621 1.755874856 0 0.285714286 0.482758621 42 1 0 57 3R:7077891-7077988 6 57.5 4736 FBgn0037468 4211.24 509.6133333 779.24 0.013653936 0.112830643 0.073789847 -7 -7 -7 0.01 dme-miR-965-3p 7mer-m8 TACGCTT 3R 7088652 7088658 + 3R_7088652_7088658_+ 0.620204855 0.620204855 0.620204855 0 alphaTub84B FBtr0081639 7088582 7088839 3R + 7088590 7088691 3'utr alphaTub84B FlyBase G40713.1 CGCCACTTCAACGCTCGATGGGAGCGTCATTGGTGGGCGGGGTAACCGTCGAAATCAGTGTTTACGCTTCCAATCGCAACAAAAAATTCACTGCAACACTGA 27 7088651 0.787850221 12 25 138 0.967741935 1.477121255 0.225806452 0.148148148 0.258064516 27 1 0 30 3R:7088590-7088691 7 alphaTub84B FBtr0081639 7088582 7088839 TACGCTT 7mer-m8 dme-miR-965-3p 3R + 7088620 7088664 3'utr alphaTub84B FlyBase G30737.1 TGGTGGGCGGGGTAACCGTCGAAATCAGTGTTTACGCTTCCAATC 8 7088651 0.741372395 4 8 47 1 1.041392685 0.090909091 0.375 0.545454545 8 0 0 11 3R:7088620-7088664 7 10 4737 FBgn0003884 10969.09667 757.73 1153.946667 0.000911652 0.013197313 0.008665912 1 1 1 0.01 dme-miR-8-3p 6mer2-7 AGTATT 3R 7088733 7088738 + 3R_7088733_7088738_+ 1 1 1 0 alphaTub84B FBtr0081639 7088582 7088839 3R + 7088711 7088840 3'utr alphaTub84B FlyBase G40714.1 AAGATTGTACGAGAAACCATAAAGTATTTTATCCACAAAGACACGTATAGCAGAAAAGCCAAGTTAACTCGGCGATAAGTTGTGTACACAAGAATAAAATCGGCCAGATTCAGTGTTGTCAGAAATAAGA 95 7088739 0.829249804 18 90 530 0.96031746 1.781755375 0.174603175 0.2 0.396825397 95 4 1 121 3R:7088711-7088840 6 alphaTub84B FBtr0081639 7088582 7088839 AGTATT 6mer2-7 dme-miR-8-3p 3R + 7088715 7088836 3'utr alphaTub84B FlyBase G30738.1 TTGTACGAGAAACCATAAAGTATTTTATCCACAAAGACACGTATAGCAGAAAAGCCAAGTTAACTCGGCGATAAGTTGTGTACACAAGAATAAAATCGGCCAGATTCAGTGTTGTCAGAAAT 52 7088739 0.965984233 13 49 290 0.961038961 1.86923172 0.142857143 0.365384615 0.571428571 52 3 0 74 3R:7088715-7088836 6 42.5 4738 FBgn0003884 10969.09667 757.73 1153.946667 0.003874521 0.05608858 0.036830125 -6 -6 -6 0.01 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 7097964 7097971 - 3R_7097964_7097971_- 0.625364269 0.625364269 0.625364269 0 Alh FBtr0334672|FBtr0081613|FBtr0081612|FBtr0113200|FBtr0334677|FBtr0081614|FBtr0334673 7097681|7097681|7097681|7097681|7097681|7097681|7097681 7098310|7098310|7098310|7098310|7098310|7098310|7098310 3R - 7097949 7098053 3'utr Alh FlyBase G48633.2 AAATAATGTACATATATACATACACAGCTGTAAATCAAATTACAGATTGTTGCACAAAAGCAGTGATTGAGAAATTATCCATTGCATTTATCGACTACATTGACA 94 7097972 0.80524409 11 93 737 0.973913043 2.049218023 0.252173913 0.170212766 0.32173913 94 3 0 112 3R:7097949-7098053 8 Alh FBtr0334673|FBtr0334677|FBtr0081614|FBtr0081612|FBtr0113200|FBtr0334672|FBtr0081613 7097681|7097681|7097681|7097681|7097681|7097681|7097681 7098310|7098310|7098310|7098310|7098310|7098310|7098310 TGCATTTA 8mer-A1 dme-miR-277-3p 3R - 7097947 7098012 3'utr Alh FlyBase G36708.1 ACAGATTGTTGCACAAAAGCAGTGATTGAGAAATTATCCATTGCATTTATCGACTACATTGACAAC 68 7097972 0.772359325 9 64 524 0.962962963 1.716003344 0.25 0.411764706 0.62962963 68 3 1 104 3R:7097947-7098012 8 65 4739 FBgn0261238 489.5366667 11.73666667 17.96333333 0.132778614 5.538199375 3.618482093 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 7098201 7098206 - 3R_7098201_7098206_- 1 1 1 0 Alh FBtr0334672|FBtr0081613|FBtr0081612|FBtr0113200|FBtr0334677|FBtr0081614|FBtr0334673 7097681|7097681|7097681|7097681|7097681|7097681|7097681 7098310|7098310|7098310|7098310|7098310|7098310|7098310 3R - 7098174 7098234 3'utr Alh FlyBase G48634.1 ATCCCACTTACACAGCCACTGCTCACAGACCAAATTTTGCGTTTAGTTATCTGTACATCCA 25 7098198 0.690535518 7 24 158 0.965517241 1.447158031 0.172413793 0.16 0.275862069 25 1 0 28 3R:7098174-7098234 6 Alh FBtr0334673|FBtr0334677|FBtr0081614|FBtr0081612|FBtr0113200|FBtr0334672|FBtr0081613 7097681|7097681|7097681|7097681|7097681|7097681|7097681 7098310|7098310|7098310|7098310|7098310|7098310|7098310 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 7098187 7098227 3'utr Alh FlyBase G36709.1 TTACACAGCCACTGCTCACAGACCAAATTTTGCGTTTAGTT 6 7098198 0.973574372 3 5 34 0.833333333 0.698970004 0.333333333 0 0 6 1 0 5 3R:7098187-7098227 6 13 4740 FBgn0261238 489.5366667 11.73666667 17.96333333 0.026555723 1.107639875 0.723696419 -8 -8 -8 0.01 dme-miR-1006-3p 6mer2-7 GAATTT 3R 7126736 7126741 - 3R_7126736_7126741_- 1 1 1 0 CG10068 FBtr0081611 7126269 7126771 3R - 7126705 7126756 3'utr CG10068 FlyBase G48646.1 AATTAATGTGAAAATGAATTTGTATCTCGCTGTATCTGAATAATTTCTAACT 20 7126736 0.903672223 7 19 173 0.958333333 1.361727836 0.333333333 0.2 0.333333333 20 1 0 23 3R:7126705-7126756 6 CG10068 FBtr0081611 7126269 7126771 GAATTT 6mer2-7 dme-miR-1006-3p 3R - 7126707 7126760 3'utr CG10068 FlyBase G36713.1 GGTCAATTAATGTGAAAATGAATTTGTATCTCGCTGTATCTGAATAATTTCTAA 8 7126726 0.983427133 6 8 65 1 1 0.3 0.25 0.4 8 0 0 10 3R:7126707-7126760 6 12.5 4741 FBgn0037473 157.0666667 11.75666667 18.12 0.079584041 1.063226538 0.689845475 -5 -15 -10 0.01 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3R 7184145 7184151 - 3R_7184145_7184151_- 0.620204031 0.620204031 0.620204031 0 CG10055 FBtr0081605 7184099 7184593 3R - 7184126 7184288 3'utr CG10055 FlyBase G48673.1 ACTTCGATTATAATTACACATACAAGTAAATCAGAACTTTAGCATTTAGTATGGCATTAGAGTATGAAACATTTGAATTTTGAATTCTGAAAAGCGAAATCTAGTTGTGCATTTGTATATACATCTATCGATATTGTTGGTGCTGCAAGCAAAGAAAACAAAA 34 7184152 0.975699461 20 33 221 1 1.602059991 0.2 0.147058824 0.275 34 0 0 40 3R:7184126-7184288 7 CG10055 FBtr0081605 7184099 7184593 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3R - 7184109 7184166 3'utr CG10055 FlyBase G36734.1 ATCTATCGATATTGTTGGTGCTGCAAGCAAAGAAAACAAAATATGAATAAAATAAAAT 12 7184152 0.980778745 4 12 83 1 1.204119983 0.4375 0.25 0.4375 12 0 0 16 3R:7184109-7184166 7 14 4742 FBgn0037482 992.8933333 50.03666667 76.9 0.014100205 0.279794817 0.182054616 1 1 1 0.01 dme-miR-282-5p 7mer-A1 GAGGCTA 3R 7184500 7184506 - 3R_7184500_7184506_- 0.823349562 0.823349562 0.823349562 0 CG10055 FBtr0081605 7184099 7184593 3R - 7184473 7184538 3'utr CG10055 FlyBase G48674.1 AAGCAACACAACCAACTTAATGTCAAAGAACGGAGGCTAAACAGTGATTACTTTTAAAATTAAAAC 77 7184518 0.945892793 8 69 305 0.898876404 1.602059991 0.011235955 0.142857143 0.258426966 77 8 1 80 3R:7184473-7184538 7 CG10055 FBtr0081605 7184099 7184593 GAGGCTA 7mer-A1 dme-miR-282-5p 3R - 7184473 7184541 3'utr CG10055 FlyBase G36735.1 AACAAGCAACACAACCAACTTAATGTCAAAGAACGGAGGCTAAACAGTGATTACTTTTAAAATTAAAAC 61 7184518 0.964734975 6 47 246 0.704545455 1.315270435 0.056818182 0.278688525 0.5 61 24 2 62 3R:7184473-7184541 7 59.5 4743 FBgn0037482 992.8933333 50.03666667 76.9 0.059925873 1.189127973 0.77373212 12 12 12 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 7194832 7194838 + 3R_7194832_7194838_+ 0.801970437 0.800306122 0.80113828 0.001176838 lap FBtr0305153|FBtr0305153|FBtr0305153 7194510|7194510|7194510 7195358|7195358|7195358 3R + 7194794 7194843 3'utr lap FlyBase G40755.1 GGAAAAAAGTATTTAATGTGTGTTTCATGTGATAACTGTGTGATAACTAT 6 7194829 0.989990095 4 5 45 0.9 0.653212514 0.1 0.333333333 0.6 6 0 1 9 3R:7194794-7194843 7 lap FBtr0305153|FBtr0305153|FBtr0305153 7194510|7194510|7194510 7195358|7195358|7195358 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 7194810 7194843 3'utr lap FlyBase G30764.1 TGTGTGTTTCATGTGATAACTGTGTGATAACTAT 5 7194830 0.97987106 3 5 40 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 3R:7194810-7194843 7 5 4744 FBgn0086372 620.47 21.26666667 32.51 0.008058407 0.235109718 0.153798831 3 2 2.5 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 7486790 7486795 - 3R_7486790_7486795_- 1 1 1 0 alpha-Est10 FBtr0305910|FBtr0305911|FBtr0289953 7486581|7486581|7486581 7486829|7486829|7486829 3R - 7486752 7486802 3'utr alpha-Est10 FlyBase G48700.1 TAGCTTTAGCTGTCTCAATTCCATGGATTTGGATAATCGTAATTAGTGTAA 6 7486784 0.993696578 6 6 52 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 3R:7486752-7486802 6 alpha-Est10 FBtr0305911|FBtr0289953|FBtr0305910 7486581|7486581|7486581 7486829|7486829|7486829 AGCTGT 6mer3-8 dme-miR-1008-3p 3R - 7486753 7486803 3'utr alpha-Est10 FlyBase G36757.1 ATAGCTTTAGCTGTCTCAATTCCATGGATTTGGATAATCGTAATTAGTGTA 5 7486797 0.99272884 3 4 43 0.888888889 0.903089987 0 0.6 0.777777778 5 1 0 8 3R:7486753-7486803 6 3.5 4745 FBgn0015569 251.6666667 14.93333333 22.87 0.013907285 0.234375 0.153038916 -11 2 -4.5 0.01 dme-miR-278-3p 6mer3-8 CCCACC 3R 7494800 7494805 - 3R_7494800_7494805_- 0.999999992 1 0.999999996 0 alpha-Est9 FBtr0302354|FBtr0302355 7494095|7493919 7495070|7495070 3R - 7494720 7494844 3'utr alpha-Est9 FlyBase G48710.1 TGCCCAACAGACTTATTTTTGGCAAGAATGATAAGTGAACCCACCCTAACCTTTTACGATTGGAAAAGCTTTACGTTGAAGCCTATGTTTGAAACAATGCAAAGCGTAGCTTTAGACATAAAATA 29 7494791 0.775250315 13 25 159 0.871794872 1.054357662 0.153846154 0.275862069 0.461538462 29 3 2 34 3R:7494720-7494844 6 alpha-Est9 FBtr0302355|FBtr0302354 7493919|7494095 7495070|7495070 CCCACC 6mer3-8 dme-miR-278-3p 3R - 7494788 7494811 3'utr alpha-Est9 FlyBase G36762.1 AGTGAACCCACCCTAACCTTTTAC 6 7494792 0.658177341 3 5 26 1 0.954242509 0.222222222 0.5 0.666666667 6 0 0 9 3R:7494788-7494811 6 7 4746 FBgn0015577 852.0066667 30.18666667 46.17 0.008215898 0.231890459 0.151613602 -14 -13 -13.5 0.01 dme-miR-92b-3p 7mer-m1 TGCAATT 3R 7519662 7519668 - 3R_7519662_7519668_- 0.765586663 0.765586663 0.765586663 0 alpha-Est7 FBtr0081550 7519561 7519750 3R - 7519642 7519730 3'utr alpha-Est7 FlyBase G48721.1 CAGCCTAACAAAGAAGTCTCTAGAAACTGTAAATAGGTCAAAATGCTTTATAAAATATATTCTGCAATTGGATTGTTTTGCTTTATAAC 41 7519680 0.818083473 13 39 298 0.96 1.380211242 0.06 0.219512195 0.36 41 1 1 48 3R:7519642-7519730 7 alpha-Est7 FBtr0081550 7519561 7519750 TGCAATT 7mer-m1 dme-miR-92b-3p 3R - 7519614 7519734 3'utr alpha-Est7 FlyBase G36770.1 TGTACAGCCTAACAAAGAAGTCTCTAGAAACTGTAAATAGGTCAAAATGCTTTATAAAATATATTCTGCAATTGGATTGTTTTGCTTTATAACTAGTTTGCCCAATGATTGCATGTGGATG 28 7519682 0.982265086 12 27 210 1 1.612783857 0.097560976 0.25 0.487804878 28 0 0 41 3R:7519614-7519734 7 7.5 4747 FBgn0015575 416.1433333 24.78333333 37.7 0.018022636 0.30262273 0.198938992 12 14 13 0.01 dme-miR-34-5p 7mer-m8 CACTGCC 3R 7857595 7857601 - 3R_7857595_7857601_- 0.708953382 0.708953382 0.708953382 0 CG17816 FBtr0333829|FBtr0113202 7855585|7855580 7858911|7858173 3R - 7857585 7857611 3'utr CG17816 FlyBase G48753.1 AAGACACTTTCACTGCCTGAACCCAAT 6 7857594 0.904793495 3 6 25 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 3R:7857585-7857611 7 CG17816 FBtr0113202|FBtr0333829 7855580|7855585 7858173|7858911 CACTGCC 7mer-m8 dme-miR-34-5p 3R - 7857586 7857611 3'utr CG17816 FlyBase G36796.1 AAGACACTTTCACTGCCTGAACCCAA 5 7857594 0.941084292 2 4 19 0.818181818 0.954242509 0.181818182 0.8 0.909090909 5 2 0 9 3R:7857586-7857611 7 5.5 4748 FBgn0037525 90 2.533333333 3.903333333 0.061111111 2.171052632 1.409052092 -7 -7 -7 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 7916011 7916016 + 3R_7916011_7916016_+ 1 1 1 0 CG2678 FBtr0304703 7915277 7916550 3R + 7915987 7916040 3'utr CG2678 FlyBase G40816.1 ATCGCCAACATCATCTTAAAAAATGTACCTATTGTTCCGAGGAGTTCAAAACAG 20 7916010 0.855888185 5 20 173 1 1.361727836 0.130434783 0.15 0.260869565 20 0 0 23 3R:7915987-7916040 6 CG2678 FBtr0304703 7915277 7916550 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 7915992 7916039 3'utr CG2678 FlyBase G30806.1 CAACATCATCTTAAAAAATGTACCTATTGTTCCGAGGAGTTCAAAACA 9 7916010 0.803827853 4 9 66 1 1.176091259 0.133333333 0.222222222 0.533333333 9 0 0 15 3R:7915992-7916039 6 14.5 4749 FBgn0014931 371 24.70666667 37.91 0.039083558 0.586886131 0.382484832 1 1 1 0.01 dme-miR-283-5p 6mer3-8 TGATAT 3R 7916757 7916762 - 3R_7916757_7916762_- 1 1 1 0 CG10445 FBtr0304704 7916597 7916927 3R - 7916700 7916813 3'utr CG10445 FlyBase G48777.1 CAATTGTGTATTAATACTACACAGACTACCTTTAACGTTATACGTTACATTTGATATAGTCGCACGTCCATAAAGCATAAAGCATATATATTCCCTTTTTTTCTATATTAAGAA 67 7916757 0.969975107 12 65 373 0.974025974 1.574031268 0.402597403 0.119402985 0.233766234 67 1 1 75 3R:7916700-7916813 6 CG10445 FBtr0304704 7916597 7916927 TGATAT 6mer3-8 dme-miR-283-5p 3R - 7916723 7916798 3'utr CG10445 FlyBase G36818.1 ACTACACAGACTACCTTTAACGTTATACGTTACATTTGATATAGTCGCACGTCCATAAAGCATAAAGCATATATAT 41 7916757 0.815368837 7 38 216 0.949152542 1.447158031 0.288135593 0.243902439 0.474576271 41 2 1 56 3R:7916723-7916798 6 45.5 4750 FBgn0037531 329.1333333 12.96 20.04666667 0.138241847 3.510802469 2.269704024 -5 -5 -5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 3R 7916841 7916847 - 3R_7916841_7916847_- 0.671796082 0.671796082 0.671796082 0 CG10445 FBtr0304704 7916597 7916927 3R - 7916823 7916853 3'utr CG10445 FlyBase G48778.1 AATTTCACCAAAGTGTTTTTTAACGGATTGA 13 7916835 0.626213475 4 13 121 1 1.176091259 0 0.076923077 0.2 13 0 0 15 3R:7916823-7916853 7 CG10445 FBtr0304704 7916597 7916927 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 7916815 7916857 3'utr CG10445 FlyBase G36819.1 TTACAATTTCACCAAAGTGTTTTTTAACGGATTGAATTCGTTT 9 7916838 0.862477825 5 7 76 1 1.079181246 0 0.333333333 0.5 9 0 0 12 3R:7916815-7916857 7 9.5 4751 FBgn0037531 329.1333333 12.96 20.04666667 0.028863682 0.733024691 0.473894247 -12 -9 -10.5 0.01 dme-miR-1008-3p 7mer-m8 AGCTGTG 3R 8005344 8005350 + 3R_8005344_8005350_+ 0.671795832 0.671795832 0.671795832 0 CG2698 FBtr0335228|FBtr0308075|FBtr0335225|FBtr0335226|FBtr0081784 8005015|8003875|8005283|8005283|8005283 8005719|8005719|8005719|8005719|8005719 3R + 8005300 8005428 3'utr CG2698 FlyBase G40847.1 AAACTACGAATTTCCTTTTAATACTCGAACTGCGAACTAACATAAGCTGTGTGGCCAAATACCTGACAATCAAAATGAGATTGGCCCGAATATCATAACCTAGACATAGGCTGGAGCTTCCTTTAACTA 55 8005351 0.956982528 12 52 248 0.9375 1.176091259 0.03125 0.163636364 0.28125 55 1 3 60 3R:8005300-8005428 7 CG2698 FBtr0081784|FBtr0335225|FBtr0335226|FBtr0335228|FBtr0308075 8005283|8005283|8005283|8005015|8003875 8005719|8005719|8005719|8005719|8005719 AGCTGTG 7mer-m8 dme-miR-1008-3p 3R + 8005315 8005390 3'utr CG2698 FlyBase G30831.1 TTTTAATACTCGAACTGCGAACTAACATAAGCTGTGTGGCCAAATACCTGACAATCAAAATGAGATTGGCCCGAAT 39 8005351 0.956495156 10 36 170 0.93877551 1.361727836 0 0.230769231 0.387755102 39 2 1 46 3R:8005315-8005390 7 31.5 4752 FBgn0037536 142.6833333 5.336666667 8.11 0.220768602 5.902560899 3.884093711 -7 -7 -7 0.01 dme-miR-184-3p 6mer3-8 TCCGTC 3R 8005499 8005504 + 3R_8005499_8005504_+ 1 1 1 0 CG2698 FBtr0335228|FBtr0308075|FBtr0335225|FBtr0335226|FBtr0081784 8005015|8003875|8005283|8005283|8005283 8005719|8005719|8005719|8005719|8005719 3R + 8005474 8005526 3'utr CG2698 FlyBase G40848.1 TGATTTTTATGATATTATTCAATATTCCGTCTATGCAGCAAGCGCTCCTTAAT 206 8005498 0.764296872 9 196 1633 0.976095618 1.91204483 0.262948207 0.180487805 0.330677291 205 4 2 245 3R:8005474-8005526 6 CG2698 FBtr0081784|FBtr0335225|FBtr0335226|FBtr0335228|FBtr0308075 8005283|8005283|8005283|8005015|8003875 8005719|8005719|8005719|8005719|8005719 TCCGTC 6mer3-8 dme-miR-184-3p 3R + 8005475 8005527 3'utr CG2698 FlyBase G30833.1 GATTTTTATGATATTATTCAATATTCCGTCTATGCAGCAAGCGCTCCTTAATA 164 8005498 0.744289014 6 159 1264 0.9765625 2.397940009 0.22265625 0.417177914 0.62890625 163 6 0 250 3R:8005475-8005527 6 178 4753 FBgn0037536 142.6833333 5.336666667 8.11 1.247517813 33.35415365 21.94821208 1 1 1 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 8005565 8005570 + 3R_8005565_8005570_+ 1 1 1 0 CG2698 FBtr0335228|FBtr0308075|FBtr0335225|FBtr0335226|FBtr0081784 8005015|8003875|8005283|8005283|8005283 8005719|8005719|8005719|8005719|8005719 3R + 8005534 8005677 3'utr CG2698 FlyBase G40848.2 CTATCGATCTTAGTGTTCTTACATACAAAATGTACCTCGAATTATTTGTAGTCGCGAAACATTTCCAAAGCCTTCAAGTACCGATATCGTGCTCGCTACTAATTGCTTAATGTAAAATTGTGATGTGTTTAAACTTAGATACAA 272 8005564 0.895979704 21 260 2110 0.951219512 1.649056554 0.082317073 0.172794118 0.31402439 272 10 6 312 3R:8005534-8005677 6 CG2698 FBtr0081784|FBtr0335225|FBtr0335226|FBtr0335228|FBtr0308075 8005283|8005283|8005283|8005015|8003875 8005719|8005719|8005719|8005719|8005719 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 8005539 8005608 3'utr CG2698 FlyBase G30833.2 GATCTTAGTGTTCTTACATACAAAATGTACCTCGAATTATTTGTAGTCGCGAAACATTTCCAAAGCCTTC 161 8005564 0.889520069 12 158 1043 0.991701245 2.378397901 0.037344398 0.354037267 0.56846473 161 2 0 239 3R:8005539-8005608 6 161 4754 FBgn0037536 142.6833333 5.336666667 8.11 1.128372854 30.1686446 19.85203453 1 1 1 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 3R 8011031 8011036 - 3R_8011031_8011036_- 1 1 1 0 CG10435 FBtr0081820 8010905 8011108 3R - 8011002 8011087 3'utr CG10435 FlyBase G48808.1 TGTACGGCCGGCTTTTACCCCCATGCCCAAACTCCGCAATCCCACCCCAATTAGCTTACAAAGATGACTCCTCTAAACGTATATTT 17 8011037 0.922857619 9 16 85 1 1.397940009 0.08 0.235294118 0.48 17 0 0 25 3R:8011002-8011087 6 CG10435 FBtr0081820 8010905 8011108 TAGCTT 6mer3-8 dme-miR-79-3p 3R - 8010999 8011039 3'utr CG10435 FlyBase G36840.1 AATTAGCTTACAAAGATGACTCCTCTAAACGTATATTTAAT 11 8011023 0.764027289 3 10 73 0.941176471 0.903089987 0 0.272727273 0.529411765 11 0 1 16 3R:8010999-8011039 6 9 4755 FBgn0037539 188.4766667 12.81 19.71666667 0.047751269 0.702576112 0.45646661 1 -13 -6 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 8036608 8036615 + 3R_8036608_8036615_+ 0.500120318 0.500120318 0.500120318 0 unc-45 FBtr0081788 8036503 8036652 3R + 8036596 8036633 3'utr unc-45 FlyBase G40867.1 AAAATATCAAATGTACTTAACTGTTTTATAAATATTGT 57 8036607 0.861064477 3 57 512 1 1.857332496 0.097222222 0.192982456 0.361111111 57 0 0 72 3R:8036596-8036633 8 unc-45 FBtr0081788 8036503 8036652 GTACTTAA 8mer-A1 dme-miR-252-5p 3R + 8036596 8036632 3'utr unc-45 FlyBase G30845.1 AAAATATCAAATGTACTTAACTGTTTTATAAATATTG 30 8036607 0.850857656 3 30 266 1 1.612783857 0.195121951 0.266666667 0.463414634 30 0 0 41 3R:8036596-8036632 8 43.5 4756 FBgn0010812 498 18.51666667 28.27333333 0.087349398 2.349234923 1.538552228 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3R 8086044 8086049 + 3R_8086044_8086049_+ 1 1 1 0 mAChR-B FBtr0344726|FBtr0081789 8085731|8085731 8087049|8087049 3R + 8086021 8086068 3'utr mAChR-B FlyBase G40869.1 AGGGAAGAGTTATCTGTAAGTAGCCAAAGGTGTGTGCTATAGTTAGAA 7 8086051 0.983093597 3 6 44 0.888888889 0.903089987 0 0.285714286 0.444444444 7 1 0 8 3R:8086021-8086068 6 mAChR-B FBtr0081789|FBtr0344726 8085731|8085731 8087049|8087049 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 8086038 8086069 3'utr mAChR-B FlyBase G30847.1 AAGTAGCCAAAGGTGTGTGCTATAGTTAGAAT 5 8086058 0.971068565 3 5 32 1 1 0 0.4 0.7 5 0 0 10 3R:8086038-8086069 6 6 4757 FBgn0037546 7.333333333 0.23 0.36 0.818181818 26.08695652 16.66666667 -7 -14 -10.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 3R 8121526 8121531 + 3R_8121526_8121531_+ 1 1 1 0 puc FBtr0081792|FBtr0339722 8121334|8121334 8122294|8122294 3R + 8121515 8121562 3'utr puc FlyBase G40882.2 AAGGAATTTTTTACCTGGCTGAAAAAATTTAGATTTTATTAAGTCAGA 26 8121526 0.683281508 9 23 210 0.90625 1.161368002 0.15625 0.115384615 0.28125 26 2 1 29 3R:8121515-8121562 6 puc FBtr0081792|FBtr0339722 8121334|8121334 8122294|8122294 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 3R + 8121506 8121594 3'utr puc FlyBase G30855.1 ACTGAAACTAAGGAATTTTTTACCTGGCTGAAAAAATTTAGATTTTATTAAGTCAGAAACGGCGAGAGGGCTGATACTTCCTATTAAAC 15 8121530 0.983019731 7 14 107 0.95 1.278753601 0.1 0.333333333 0.5 15 1 0 19 3R:8121506-8121594 6 16.5 4758 FBgn0243512 1835.12 76.61666667 117.5466667 0.008991238 0.215357842 0.140369782 0 -4 -2 0.01 dme-miR-980-3p 6mer2-7 GCAGCT 3R 8121709 8121714 + 3R_8121709_8121714_+ 1 1 1 0 puc FBtr0081792|FBtr0339722 8121334|8121334 8122294|8122294 3R + 8121640 8121751 3'utr puc FlyBase G40883.1 ATAAAAACGTTCAATATCTGTACATACAAACGTACCTAAAACAAAACACAAGGGAAAGAAATACCAATTGCAGCTTAAACTATGTACTTGCAATACCTTTTAAGAGCTTTTG 101 8121707 0.801135091 13 99 543 0.982905983 2.06069784 0.076923077 0.148514851 0.264957265 101 2 0 115 3R:8121640-8121751 6 puc FBtr0081792|FBtr0339722 8121334|8121334 8122294|8122294 GCAGCT 6mer2-7 dme-miR-980-3p 3R + 8121688 8121746 3'utr puc FlyBase G30857.1 CAAGGGAAAGAAATACCAATTGCAGCTTAAACTATGTACTTGCAATACCTTTTAAGAGC 56 8121707 0.802543346 7 53 288 1 1.908485019 0.024691358 0.303571429 0.518518519 56 0 0 81 3R:8121688-8121746 6 63 4759 FBgn0243512 1835.12 76.61666667 117.5466667 0.03433018 0.822275397 0.53595735 2 2 2 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3R 8122148 8122153 + 3R_8122148_8122153_+ 1 1 1 0 puc FBtr0081792|FBtr0339722 8121334|8121334 8122294|8122294 3R + 8122096 8122210 3'utr puc FlyBase G40887.1 TCCGCTATAGCCACTCTAATAGTTTAGTTACTTCTTGAAAGTGAAAAAAGTTTGTGTTTTCTAGTTTTAATTATTTATATGAAGCGAGTGTGTGAGAGGATTATGATTCATTTCG 53 8122147 0.983405532 19 50 439 0.953125 1.785329835 0.234375 0.150943396 0.296875 53 3 0 61 3R:8122096-8122210 6 puc FBtr0081792|FBtr0339722 8121334|8121334 8122294|8122294 TGTGTT 6mer3-8 dme-miR-317-3p 3R + 8122123 8122168 3'utr puc FlyBase G30860.1 TTACTTCTTGAAAGTGAAAAAAGTTTGTGTTTTCTAGTTTTAATTA 6 8122146 0.986585453 4 6 59 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3R:8122123-8122168 6 13 4760 FBgn0243512 1835.12 76.61666667 117.5466667 0.007084005 0.169675876 0.110594374 1 2 1.5 0.01 dme-miR-1003-3p 7mer-A1 TGTGAGA 3R 8122186 8122192 + 3R_8122186_8122192_+ 0.823349562 0.823349562 0.823349562 0 puc FBtr0081792|FBtr0339722 8121334|8121334 8122294|8122294 3R + 8122096 8122210 3'utr puc FlyBase G40887.1 TCCGCTATAGCCACTCTAATAGTTTAGTTACTTCTTGAAAGTGAAAAAAGTTTGTGTTTTCTAGTTTTAATTATTTATATGAAGCGAGTGTGTGAGAGGATTATGATTCATTTCG 53 8122184 0.983405532 19 50 439 0.953125 1.785329835 0.234375 0.150943396 0.296875 53 3 0 61 3R:8122096-8122210 7 puc FBtr0081792|FBtr0339722 8121334|8121334 8122294|8122294 TGTGAGA 7mer-A1 dme-miR-1003-3p 3R + 8122171 8122227 3'utr puc FlyBase G30861.1 TATATGAAGCGAGTGTGTGAGAGGATTATGATTCATTTCGTATTAGATCGTAAGTCT 13 8122184 0.959462383 7 13 72 1 1.361727836 0.304347826 0.461538462 0.695652174 13 0 0 23 3R:8122171-8122227 7 17 4761 FBgn0243512 1835.12 76.61666667 117.5466667 0.009263699 0.221883837 0.144623412 2 2 2 0.01 dme-miR-31a-5p 7mer-A1 CTTGCCA 3R 8125187 8125193 + 3R_8125187_8125193_+ 0.823349562 0.823349562 0.823349562 0 CG7878 FBtr0113205 8125137 8125273 3R + 8125168 8125217 3'utr CG7878 FlyBase G40902.1 CTAGAGCGCATTGAAGTGCCTTGCCAAAAATTGTTTAACTATTTATCTAT 27 8125189 0.869886937 2 26 202 0.96875 1.491361694 0.0625 0.148148148 0.28125 27 1 0 31 3R:8125168-8125217 7 CG7878 FBtr0113205 8125137 8125273 CTTGCCA 7mer-A1 dme-miR-31a-5p 3R + 8125153 8125215 3'utr CG7878 FlyBase G30869.1 TCTAGTTATAAGAGACTAGAGCGCATTGAAGTGCCTTGCCAAAAATTGTTTAACTATTTATCT 23 8125189 0.981144917 5 21 155 0.972222222 1.544068044 0.111111111 0.391304348 0.611111111 23 1 0 35 3R:8125153-8125215 7 24 4762 FBgn0037549 1708.053333 87.89666667 135.3866667 0.014051083 0.273047897 0.177270041 -2 -2 -2 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3R 8237061 8237066 + 3R_8237061_8237066_+ 1 1 1 0 DNApol-iota FBtr0339606 8236542 8237389 3R + 8237039 8237076 3'utr DNApol-iota FlyBase G40932.1 ACATATCCTAGCGGCATTCAGTCCAAAGCGGTCTCCCA 6 8237055 0.913980447 2 6 23 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 3R:8237039-8237076 6 DNApol-iota FBtr0339606 8236542 8237389 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 8237036 8237077 3'utr DNApol-iota FlyBase G30890.1 CTTACATATCCTAGCGGCATTCAGTCCAAAGCGGTCTCCCAG 6 8237055 0.942813978 4 5 24 1 0.954242509 0.222222222 0.333333333 0.555555556 6 0 0 9 3R:8237036-8237077 6 5.5 4763 FBgn0037554 325.21 13.97 21.14 0.016912149 0.393700787 0.260170293 6 6 6 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 3R 8237390 8237396 - 3R_8237390_8237396_- 0.620204266 0.620204266 0.620204266 0 Ada2b FBtr0334315|FBtr0081807|FBtr0100368 8236630|8237112|8237112 8237918|8237918|8237437 3R - 8237369 8237410 3'utr Ada2b FlyBase G48853.1 GATTAAGAGCCACATGCATTTCCAAGGACTTCACTTTATTTT 13 8237394 0.985746298 6 9 76 0.714285714 1 0.071428571 0.076923077 0.142857143 13 4 0 10 3R:8237369-8237410 7 Ada2b FBtr0100368|FBtr0081807|FBtr0334315 8237112|8237112|8236630 8237437|8237918|8237918 TGCATTT 7mer-m8 dme-miR-277-3p 3R - 8237375 8237408 3'utr Ada2b FlyBase G36877.1 TTAAGAGCCACATGCATTTCCAAGGACTTCACTT 7 8237395 0.882334126 3 6 40 0.909090909 1 0.090909091 0.428571429 0.636363636 7 1 0 10 3R:8237375-8237408 7 9 4764 FBgn0037555 444.2066667 24.31 37.33666667 0.02026084 0.370218017 0.241049906 -2 -1 -1.5 0.01 dme-miR-14-3p 7mer-m8 AAGACTG 3R 8237527 8237533 - 3R_8237527_8237533_- 0.671795832 0.671795832 0.671795832 0 Ada2b FBtr0334315|FBtr0081807 8236630|8237112 8237918|8237918 3R - 8237471 8237558 3'utr Ada2b FlyBase G48854.1 TACGCCCACCACCTACCTCTCGGTTAAGACTGTCTGCTTGAGCGGAGCACCATCGTTGGGTAGTCCTATGGAGACTTCGCTGCGCAAG 34 8237534 0.946006529 12 30 235 0.880952381 1.568201724 0.119047619 0.205882353 0.357142857 34 5 0 37 3R:8237471-8237558 7 Ada2b FBtr0081807|FBtr0334315 8237112|8236630 8237918|8237918 AAGACTG 7mer-m8 dme-miR-14-3p 3R - 8237473 8237596 3'utr Ada2b FlyBase G36878.1 AGTCACAACGAGCTGGATCTGTGCAAGAAGCATAATATTACGCCCACCACCTACCTCTCGGTTAAGACTGTCTGCTTGAGCGGAGCACCATCGTTGGGTAGTCCTATGGAGACTTCGCTGCGCA 24 8237534 0.983305192 15 18 137 0.75 1.079181246 0.28125 0.25 0.4375 24 7 1 24 3R:8237473-8237596 7 21 4765 FBgn0037555 444.2066667 24.31 37.33666667 0.047275292 0.86384204 0.562449781 1 1 1 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 8237571 8237576 - 3R_8237571_8237576_- 1 1 1 0 Ada2b FBtr0334315|FBtr0081807 8236630|8237112 8237918|8237918 3R - 8237564 8237608 3'utr Ada2b FlyBase G48855.1 AGTGAACTGCTCAGTCACAACGAGCTGGATCTGTGCAAGAAGCAT 5 8237579 0.915807613 3 5 20 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:8237564-8237608 6 Ada2b FBtr0081807|FBtr0334315 8237112|8236630 8237918|8237918 GTGCAA 6mer3-8 dme-miR-92b-3p 3R - 8237473 8237596 3'utr Ada2b FlyBase G36878.1 AGTCACAACGAGCTGGATCTGTGCAAGAAGCATAATATTACGCCCACCACCTACCTCTCGGTTAAGACTGTCTGCTTGAGCGGAGCACCATCGTTGGGTAGTCCTATGGAGACTTCGCTGCGCA 24 8237578 0.983305192 15 18 137 0.75 1.079181246 0.28125 0.25 0.4375 24 7 1 24 3R:8237473-8237596 6 3.5 4766 FBgn0037555 444.2066667 24.31 37.33666667 0.007879215 0.143973673 0.09374163 3 2 2.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 8240818 8240824 - 3R_8240818_8240824_- 0.799999763 0.801968991 0.800984377 0.001392435 CG9636 FBtr0081806|FBtr0081806|FBtr0081806 8240745|8240745|8240745 8242389|8242389|8242389 3R - 8240810 8240850 3'utr CG9636 FlyBase G48864.1 ATTTTATATATATTAATATTATTTTTTGTGATAATTTAAAA 19 8240826 0.616078792 6 17 260 0.913043478 0.84509804 0 0.210526316 0.347826087 19 0 2 21 3R:8240810-8240850 7 CG9636 FBtr0081806|FBtr0081806|FBtr0081806 8240745|8240745|8240745 8242389|8242389|8242389 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 8240804 8240850 3'utr CG9636 FlyBase G36884.1 ATTTTATATATATTAATATTATTTTTTGTGATAATTTAAAAAAGGCA 18 8240827 0.6500114 8 15 242 0.769230769 1 0 0.333333333 0.538461538 18 5 1 20 3R:8240804-8240850 7 18 4767 FBgn0037556 751.8933333 33.43666667 51.34666667 0.023939566 0.538331173 0.350558297 2 3 2.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 8241671 8241676 - 3R_8241671_8241676_- 1 1 1 0 CG9636 FBtr0081806|FBtr0081806|FBtr0081806|FBtr0306301|FBtr0306301|FBtr0306301 8240745|8240745|8240745|8240907|8240907|8240907 8242389|8242389|8242389|8242389|8242389|8242389 3R - 8241497 8241752 3'utr CG9636 FlyBase G48870.1 TATGACGACTGGGGTCGCGCCTGCGCTGTGACTTTTCCTTAGTTCCTTACGCAAGCGAATTCAAATCGAACCGTATCTGTGAAAATCGTGAATCTCAAACTCTTGAATGTCCTCGAACAGTATTGTTAAACATACTTCAGTCCCTAGGATCAGACGCAGGTGCGACACCAAAACCGAATTTGGCGCTCAAATAGACTTATTTAGACGTTTTTAGGTACTCGAATTGATAAATTTTGTTGGCCGTGTGCGTGTTTTT 281 8241677 0.826200735 33 269 1838 0.961538462 2.511883361 0.25739645 0.163701068 0.304733728 281 13 0 325 3R:8241497-8241752 6 CG9636 FBtr0081806|FBtr0081806|FBtr0081806|FBtr0306301|FBtr0306301|FBtr0306301 8240745|8240745|8240745|8240907|8240907|8240907 8242389|8242389|8242389|8242389|8242389|8242389 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 8241535 8241777 3'utr CG9636 FlyBase G36887.1 TCTGTTTCCGTTGCCAGTCGTCAATTATGACGACTGGGGTCGCGCCTGCGCTGTGACTTTTCCTTAGTTCCTTACGCAAGCGAATTCAAATCGAACCGTATCTGTGAAAATCGTGAATCTCAAACTCTTGAATGTCCTCGAACAGTATTGTTAAACATACTTCAGTCCCTAGGATCAGACGCAGGTGCGACACCAAAACCGAATTTGGCGCTCAAATAGACTTATTTAGACGTTTTTAGGTAC 190 8241677 0.823370133 28 181 1149 0.944029851 1.925999266 0.291044776 0.315789474 0.514925373 190 13 2 253 3R:8241535-8241777 6 111 4768 FBgn0037556 751.8933333 33.43666667 51.34666667 0.147627323 3.319708902 2.161776162 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 8241901 8241906 - 3R_8241901_8241906_- 0.999999991 0.999999859 0.999999925 7.07E-08 CG9636 FBtr0081806|FBtr0306301 8240745|8240907 8242389|8242389 3R - 8241885 8241991 3'utr CG9636 FlyBase G48872.1 CATACTGTTGCTAGTTGGCCATTGCCACAGGACCTTGAGCCCTCATCGCGCCAATGCCCATGACAAAGACACAAAGACTTTACATACCAAATTAGTTGATAGTTATG 125 8241911 0.726731818 13 117 505 0.954545455 2.167317335 0.077922078 0.144 0.305194805 125 7 0 147 3R:8241885-8241991 6 CG9636 FBtr0081806|FBtr0306301 8240745|8240907 8242389|8242389 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 8241887 8241990 3'utr CG9636 FlyBase G36889.1 ATACTGTTGCTAGTTGGCCATTGCCACAGGACCTTGAGCCCTCATCGCGCCAATGCCCATGACAAAGACACAAAGACTTTACATACCAAATTAGTTGATAGTTA 69 8241911 0.948331186 13 65 258 0.979166667 1.973127854 0.09375 0.31884058 0.510416667 69 2 0 94 3R:8241887-8241990 6 54 4769 FBgn0037556 751.8933333 33.43666667 51.34666667 0.071818698 1.61499352 1.05167489 5 5 5 0.01 dme-miR-307a-3p 6mer3-8 GGTTGT 3R 8262256 8262261 - 3R_8262256_8262261_- 1 1 1 0 RpA-70 FBtr0081867 8262118 8262361 3R - 8262237 8262286 3'utr RpA-70 FlyBase G48886.1 ACGTTATTTCCAAATATTGTGAATGGGTTGTTATTCAGCTACGCTTCCCT 157 8262270 0.734602452 7 152 1447 0.965714286 1.449735454 0.057142857 0.108280255 0.2 157 1 5 169 3R:8262237-8262286 6 RpA-70 FBtr0081867 8262118 8262361 GGTTGT 6mer3-8 dme-miR-307a-3p 3R - 8262232 8262292 3'utr RpA-70 FlyBase G36896.1 TTACATACGTTATTTCCAAATATTGTGAATGGGTTGTTATTCAGCTACGCTTCCCTTAATT 86 8262270 0.704613687 9 80 780 0.935483871 1.161368002 0.096774194 0.325581395 0.532258065 86 1 7 116 3R:8262232-8262292 6 119 4770 FBgn0010173 2297.653333 131.1433333 201.0833333 0.051791973 0.907404113 0.591794447 9 9 9 0.01 dme-miR-14-3p 6mer2-7 AGACTG 3R 8302765 8302770 - 3R_8302765_8302770_- 1 1 1 0 nac FBtr0081863 8302684 8302798 3R - 8302745 8302788 3'utr nac FlyBase G48900.1 AAGCTGCCAAAGTAAAGTAGACTGTTTAGGACTCTAGGAGATGT 19 8302763 0.894385741 4 17 124 0.916666667 1.342422681 0.083333333 0.210526316 0.375 19 2 0 22 3R:8302745-8302788 6 nac FBtr0081863 8302684 8302798 AGACTG 6mer2-7 dme-miR-14-3p 3R - 8302741 8302788 3'utr nac FlyBase G36911.1 AAGCTGCCAAAGTAAAGTAGACTGTTTAGGACTCTAGGAGATGTAAGT 20 8302771 0.958973438 7 20 124 1 1.447158031 0.107142857 0.3 0.5 20 0 0 28 3R:8302741-8302788 6 19 4771 FBgn0265351 61.36333333 6.03 9.073333333 0.309631159 3.150912106 2.094048494 -7 1 -3 0.01 dme-miR-304-5p 7mer-A1 GAGATTA 3R 8304539 8304545 - 3R_8304539_8304545_- 0.823349562 0.823349562 0.823349562 0 Sgt1 FBtr0081862 8304188 8304585 3R - 8304514 8304582 3'utr Sgt1 FlyBase G48904.1 AAATGGCCATACTCCTTTATTTATAGAGTCAGCGAGAGAGATTAACAGAGAATAATTACTATAACGTGT 100 8304540 0.791933202 13 86 505 0.876106195 1.217483944 0.185840708 0.12 0.221238938 100 9 5 99 3R:8304514-8304582 7 Sgt1 FBtr0081862 8304188 8304585 GAGATTA 7mer-A1 dme-miR-304-5p 3R - 8304515 8304562 3'utr Sgt1 FlyBase G36912.1 TTATAGAGTCAGCGAGAGAGATTAACAGAGAATAATTACTATAACGTG 66 8304541 0.557150092 6 54 298 0.816326531 1.057991947 0.081632653 0.393939394 0.591836735 66 12 6 80 3R:8304515-8304562 7 79 4772 FBgn0265101 762 87.04666667 133.2433333 0.103674541 0.907559164 0.592900208 -5 -4 -4.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 3R 8315080 8315086 - 3R_8315080_8315086_- 0.671796082 0.671796082 0.671796082 0 Coq2 FBtr0081858 8314782 8315153 3R - 8315052 8315117 3'utr Coq2 FlyBase G48913.1 ATGTTTATAGCGCGCTTTTTGATTCGCCAAAACCAAAGTCTCTAGGTATCTGATTAGATAAAATCT 58 8315064 0.714823478 9 55 436 0.96969697 1.806179974 0.121212121 0.157894737 0.272727273 57 2 0 64 3R:8315052-8315117 7 Coq2 FBtr0081858 8314782 8315153 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 8315039 8315122 3'utr Coq2 FlyBase G36919.1 AAATTATGTTTATAGCGCGCTTTTTGATTCGCCAAAACCAAAGTCTCTAGGTATCTGATTAGATAAAATCTTGTAAATAGGCTT 31 8315064 0.981238736 11 31 235 1 1.681241237 0.083333333 0.387096774 0.604166667 31 0 0 48 3R:8315039-8315122 7 26.5 4773 FBgn0037574 98.31666667 7.263333333 11.13333333 0.26953721 3.648462598 2.380239521 -22 -22 -22 0.01 dme-miR-2535b-3p 6mer3-8 CCGTGA 3R 8340466 8340471 - 3R_8340466_8340471_- 1 1 1 0 CG9603 FBtr0081855|FBtr0305680 8339942|8339942 8340519|8340519 3R - 8340429 8340625 stop_codon CG9603 FlyBase G48919.1 CGTCGTGGACAACGTGCTCTACCGCGTCACCGTCGCTCTCGCCCTCGTCGGCATCGGTGGCATGGGCAAGCTTTTCTACGAGCTGAGTGTTCCCAAGAAGGAGTGAAGTCGCAGTACCGAACCCTAAGCTAAGCCATTAAACCCCGCGCAAGATCCGTGATTCAGCGTAGTCGCCTTATATTTCAATGTTTTGATTG 119 8340464 0.966881188 17 102 551 0.856115108 1.297395711 0.323741007 0.159663866 0.28057554 119 15 5 119 3R:8340429-8340625 6 CG9603 FBtr0081855|FBtr0305680 8339942|8339942 8340519|8340519 CCGTGA 6mer3-8 dme-miR-2535b-3p 3R - 8340442 8340487 5'utr CG9603 FlyBase G36925.1 AAACCCCGCGCAAGATCCGTGATTCAGCGTAGTCGCCTTATATTTC 64 8340464 0.949002874 6 58 285 0.921052632 1.419129308 0.570175439 0.53125 0.736842105 64 6 3 105 3R:8340442-8340487 6 83 4774 FBgn0040529 1087.99 255.58 391.3733333 0.076287466 0.324751546 0.212073723 -7 -7 -7 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 8351719 8351724 + 3R_8351719_8351724_+ 1 1 1 0 Atg13 FBtr0081843 8351704 8352817 3R + 8351599 8351809 stop_codon Atg13 FlyBase G41014.1 TCGAGACCTCGCTGGAGGACTACGACAAGCTGGTCTCGCAGTTCGGGCTAACGGGCTCCTCATCGACGGGTAGCCGCAGCAGTGGTGGGCTCCAAATGAGCAACTGAGCGGAATAATGCCTCTAGTTATGTCATTAGTTAGTTTTTATTTATGGAAGGGCGGTCAATATGGAGAGAGGCAGGGACAAACTAAAATATCAAGGACGACTTTA 44 8351718 0.971306238 19 37 207 0.875 1.322219295 0.229166667 0.090909091 0.166666667 44 5 1 42 3R:8351599-8351809 6 Atg13 FBtr0081843 8351704 8352817 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 8351619 8351741 stop_codon Atg13 FlyBase G30953.1 TACGACAAGCTGGTCTCGCAGTTCGGGCTAACGGGCTCCTCATCGACGGGTAGCCGCAGCAGTGGTGGGCTCCAAATGAGCAACTGAGCGGAATAATGCCTCTAGTTATGTCATTAGTTAGTT 23 8351721 0.969501118 10 22 124 0.970588235 1.51851394 0.264705882 0.304347826 0.529411765 23 1 0 33 3R:8351619-8351741 6 11 4775 FBgn0261108 690.5733333 27.67666667 42.22333333 0.015928793 0.397446706 0.26051946 1 -2 -0.5 0.01 dme-miR-184-3p 6mer3-8 TCCGTC 3R 8359853 8359858 + 3R_8359853_8359858_+ 1 1 1 0 stck FBtr0081846|FBtr0081845|FBtr0081844|FBtr0306260 8359725|8359725|8359725|8359725 8359960|8359964|8359964|8359964 3R + 8359804 8359886 3'utr stck FlyBase G41033.1 ATTTGAGAAACTAAAACCAAACAAACTAAAACCTCTTGTGCATGTCCTTTCCGTCTGTTGTAATCCGGTTGTGTGTAACTTAA 57 8359852 0.991784635 9 50 548 0.914634146 1.273001272 0.402439024 0.245614035 0.475609756 57 4 3 75 3R:8359804-8359886 6 stck FBtr0081846|FBtr0081845|FBtr0081844|FBtr0306260 8359725|8359725|8359725|8359725 8359960|8359964|8359964|8359964 TCCGTC 6mer3-8 dme-miR-184-3p 3R + 8359704 8359865 stop_codon stck FlyBase G30969.1 TGACAATGAAAAAGAACACCTAATGCCTTGGAGCGAGTCTCAGATCCACACCAAACAGTGCCTTTGTCGTTGTAGACCCGCTTTCACTACCATTTTTAACATTTGAGAAACTAAAACCAAACAAACTAAAACCTCTTGTGCATGTCCTTTCCGTCTGTTGTA 63 8359852 0.98422314 12 63 496 1 1.924279286 0.452380952 0.26984127 0.452380952 63 0 0 84 3R:8359704-8359865 6 43 4776 FBgn0020249 375.3333333 31.76 48.60666667 0.114564831 1.353904282 0.884652311 1 1 1 0.01 dme-miR-263a-5p 6mer2-7 TGCCAT 3R 8560034 8560039 - 3R_8560034_8560039_- 1 1 1 0 pch2 FBtr0339330 8559538 8560289 3R - 8560007 8560064 3'utr pch2 FlyBase G48936.1 TGTTATTTGCTTGCAAGTCCCTACATGCCATCCACTGCTCACCTACTCCACCCTTCTT 9 8560039 0.973588394 3 9 59 1 1 0.2 0.111111111 0.2 9 0 0 10 3R:8560007-8560064 6 pch2 FBtr0339330 8559538 8560289 TGCCAT 6mer2-7 dme-miR-263a-5p 3R - 8560023 8560058 3'utr pch2 FlyBase G36936.1 TTGCTTGCAAGTCCCTACATGCCATCCACTGCTCAC 5 8560036 0.942865539 2 4 25 0.833333333 0.698970004 0 0.2 0.333333333 5 1 0 5 3R:8560023-8560058 6 5.5 4777 FBgn0051453 389.6666667 31.09 47.42 0.014114628 0.176905757 0.115984817 0 -3 -1.5 0.01 dme-miR-980-5p 8mer-A1 GAAAAACA 3R 8560188 8560195 - 3R_8560188_8560195_- 0.639886926 0.639886926 0.639886926 0 pch2 FBtr0081898|FBtr0339330 8560156|8559538 8560289|8560289 3R - 8560190 8560272 3'utr pch2 FlyBase G48937.1 GACTGAAAAAATGAATTTACTAAACCCACTCTATGTTCATCAAATGCGATACTTTGTAAACTTCAATTTGCTGCTATGAAAAA 33 8560206 0.946530899 10 32 266 0.972972973 1.255272505 0.162162162 0.121212121 0.216216216 33 0 1 36 3R:8560190-8560272 5 pch2 FBtr0081898|FBtr0339330 8560156|8559538 8560289|8560289 GAAAAACA 8mer-A1 dme-miR-980-5p 3R - 8560190 8560219 3'utr pch2 FlyBase G36937.1 TTGTAAACTTCAATTTGCTGCTATGAAAAA 10 8560206 0.754665095 2 10 90 1 1.278753601 0.105263158 0.4 0.684210526 10 0 0 19 3R:8560190-8560219 5 12 4778 FBgn0051453 389.6666667 31.09 47.42 0.030795552 0.385976198 0.253057782 11 11 11 0.01 dme-miR-263a-5p 7mer-m1 TGCCATT 3R 8647637 8647643 - 3R_8647637_8647643_- 0.765586663 0.765586663 0.765586663 0 Mkk4 FBtr0334320|FBtr0081892 8646170|8647582 8648721|8648721 3R - 8647621 8647658 3'utr Mkk4 FlyBase G48951.1 CGCATATTTATACCATGCCATTCCTGCCCAAAAATATT 60 8647638 0.74574753 3 59 294 0.971830986 1.838849091 0 0.166666667 0.295774648 60 2 0 69 3R:8647621-8647658 7 Mkk4 FBtr0334320|FBtr0081892 8646170|8647582 8648721|8648721 TGCCATT 7mer-m1 dme-miR-263a-5p 3R - 8647613 8647665 3'utr Mkk4 FlyBase G36948.1 GACGTACCGCATATTTATACCATGCCATTCCTGCCCAAAAATATTCACAGCCA 34 8647638 0.924412357 2 34 167 1 1.69019608 0.06122449 0.323529412 0.530612245 34 0 0 49 3R:8647613-8647665 7 47 4779 FBgn0024326 1503.63 65.79666667 100.66 0.03125769 0.714321901 0.466918339 -5 -5 -5 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 3R 8647820 8647825 - 3R_8647820_8647825_- 1 1 1 0 Mkk4 FBtr0334320|FBtr0081892|FBtr0300443 8646170|8647582|8647755 8648721|8648721|8648721 3R - 8647809 8647840 3'utr Mkk4 FlyBase G48953.1 ACAAAAACAAAAGTCATGTGAAAACTACAAAT 7 8647825 0.894502451 3 6 19 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3R:8647809-8647840 6 Mkk4 FBtr0334320|FBtr0081892|FBtr0300443 8646170|8647582|8647755 8648721|8648721|8648721 ATGTGA 6mer3-8 dme-miR-1003-3p 3R - 8647803 8647844 3'utr Mkk4 FlyBase G36950.1 AGCTACAAAAACAAAAGTCATGTGAAAACTACAAATAAAACA 7 8647815 0.928447892 4 7 23 1 1.041392685 0 0.571428571 0.727272727 7 0 0 11 3R:8647803-8647844 6 6.5 4780 FBgn0024326 1503.63 65.79666667 100.66 0.004322872 0.098789199 0.064573813 0 -10 -5 0.01 dme-miR-79-3p 7mer-A1 AGCTTTA 3R 8648026 8648032 - 3R_8648026_8648032_- 0.823349562 0.823349562 0.823349562 0 Mkk4 FBtr0334320|FBtr0081892|FBtr0300443 8646170|8647582|8647755 8648721|8648721|8648721 3R - 8648022 8648051 3'utr Mkk4 FlyBase G48954.1 AATGAAAATGATTGTGAAAAGCTTTAAATA 6 8648040 0.72514046 2 6 38 1 0.77815125 0.166666667 0 0 6 0 0 6 3R:8648022-8648051 7 Mkk4 FBtr0334320|FBtr0081892|FBtr0300443 8646170|8647582|8647755 8648721|8648721|8648721 AGCTTTA 7mer-A1 dme-miR-79-3p 3R - 8647980 8648059 3'utr Mkk4 FlyBase G36951.1 ATTTGCATAATGAAAATGATTGTGAAAAGCTTTAAATAATTGCCAAGCGGCTGAGATGTTTAAATGTAGTAGAAATTATT 12 8648040 0.975951851 8 12 76 1 1.204119983 0.125 0.166666667 0.375 12 0 0 16 3R:8647980-8648059 7 7.5 4781 FBgn0024326 1503.63 65.79666667 100.66 0.004987929 0.113987537 0.074508246 8 8 8 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 8655106 8655111 - 3R_8655106_8655111_- 1 1 1 0 bel FBtr0334319 8654973 8655784 3R - 8655098 8655138 3'utr bel FlyBase G48974.1 TGAAAGCGCAAATCCTTGAACTTCAATTGATGATTTTAAAC 10 8655111 0.961488311 4 10 84 1 1.113943352 0.076923077 0.3 0.461538462 10 0 0 13 3R:8655098-8655138 6 bel FBtr0334319 8654973 8655784 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R - 8655079 8655127 3'utr bel FlyBase G36964.1 ATCCTTGAACTTCAATTGATGATTTTAAACGAAGAAAACATAAAAATAG 6 8655112 0.983124136 5 6 47 1 0.954242509 0.111111111 0.333333333 0.555555556 6 0 0 9 3R:8655079-8655127 6 7 4782 FBgn0263231 3598.653333 111.0166667 171.27 0.001945172 0.063053596 0.040871139 0 1 0.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 8660991 8660996 - 3R_8660991_8660996_- 0.999378697 1 0.999689349 0.000439325 p FBtr0081887 8660901 8661085 3R - 8660966 8661031 3'utr p FlyBase G48995.1 ATTGTTCCACTAACTAATCTCAAGCTAAGGCCAATACCAAAAGCATTTATTCTATATAAACATGTA 24 8661017 0.829686151 5 23 150 0.961538462 1.397940009 0.038461538 0.083333333 0.153846154 24 1 0 25 3R:8660966-8661031 6 p FBtr0081887 8660901 8661085 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 8660985 8661029 3'utr p FlyBase G36980.1 TGTTCCACTAACTAATCTCAAGCTAAGGCCAATACCAAAAGCATT 13 8660997 0.970503343 5 11 64 0.842105263 1.204119983 0 0.307692308 0.526315789 13 3 0 16 3R:8660985-8661029 6 7.5 4783 FBgn0086679 347.6633333 14.90333333 22.9 0.021572594 0.503243122 0.327510917 21 1 11 0.01 dme-bantam-3p 7mer-m8 TGATCTC 3R 8714893 8714899 + 3R_8714893_8714899_+ 0.661615243 0.661615243 0.661615243 0 CG8112 FBtr0343149 8713899 8715263 3R + 8714864 8715219 stop_codon CG8112 FlyBase G41107.2 CAAGGTGGCCGCCTCGCTGGCAGTGTTCATGATCTCCGCTGTGGTCCATGAGCAGGTTCTCGGCTTTGCCCTGCAAATGTTCTTCCCAGTGATGTTCTTCTTCTTTGGGGTCGTGGGTGTTGCCTTGGTATTCCTAATGCGGAGTGCTCCAAAAGTGATGGGCAACATCTTTCTGTGGTTCTCTCTGATCCTGGGAAATGCCACGCTGATCTCACTATACGCCATGGAGCATTACGCCCTAAAGAACTGCAACCTAAGCAACGAGAGTTGGACGTATCGCCTGCTGCCGGCGGTATGGCGCTGCTACAATTAGTCAATTAGTTAAACACTACTTTTAAACTGTCTGTACACAGGGC 207 8714893 0.847350264 51 199 1465 0.966101695 1.880813592 0.25 0.120772947 0.228813559 207 6 2 228 3R:8714864-8715219 7 CG8112 FBtr0343149 8713899 8715263 TGATCTC 7mer-m8 dme-bantam-3p 3R + 8714833 8714984 3'utr CG8112 FlyBase G31014.1 AGGATATGTACACTCATGTGTTCCGAGGTTCCAAGGTGGCCGCCTCGCTGGCAGTGTTCATGATCTCCGCTGTGGTCCATGAGCAGGTTCTCGGCTTTGCCCTGCAAATGTTCTTCCCAGTGATGTTCTTCTTCTTTGGGGTCGTGGGTGTT 65 8714893 0.987779797 16 57 517 0.876404494 1.892094603 0.359550562 0.323076923 0.505617978 65 11 0 78 3R:8714833-8714984 7 64 4784 FBgn0037612 294.1433333 19.15333333 28.95666667 0.217580998 3.341454925 2.210199148 0 0 0 0.01 dme-miR-965-3p 7mer-m8 TACGCTT 3R 8715221 8715227 + 3R_8715221_8715227_+ 0.620204855 0.620204855 0.620204855 0 CG8112 FBtr0305337|FBtr0343149 8715175|8713899 8715263|8715263 3R + 8715221 8715263 3'utr CG8112 FlyBase G41108.1 TACGCTTCGATTTGTATTTTAGGTAAATAAACTTAATGAAATT 20 8715239 0.659672077 5 19 201 0.956521739 1.342422681 0 0.15 0.260869565 20 1 0 22 3R:8715221-8715263 6 CG8112 FBtr0305337|FBtr0343149 8715175|8713899 8715263|8715263 TACGCTT 7mer-m8 dme-miR-965-3p 3R + 8715222 8715254 3'utr CG8112 FlyBase G31016.1 ACGCTTCGATTTGTATTTTAGGTAAATAAACTT 12 8715238 0.603637581 5 10 123 0.842105263 1.204119983 0.105263158 0.5 0.684210526 12 3 0 16 3R:8715222-8715254 5 9.5 4785 FBgn0037612 294.1433333 19.15333333 28.95666667 0.032297179 0.495997215 0.328076436 -18 -17 -17.5 0.01 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 8715319 8715326 - 3R_8715319_8715326_- 0.625364009 0.625364009 0.625364009 0 Cks85A FBtr0081949|FBtr0305339|FBtr0337074 8715198|8715198|8712904 8715436|8715436|8715436 3R - 8715269 8715335 3'utr Cks85A FlyBase G49018.1 AAGAAACCATAGCTTTAGGGTTCAGCTGGGAAGTTCAAAGACACGAAACGAACTGAAGACATCGTTT 25 8715326 0.968230572 8 24 130 0.925925926 1.397940009 0.148148148 0.08 0.148148148 25 2 0 25 3R:8715269-8715335 8 Cks85A FBtr0305339|FBtr0337074|FBtr0081949 8715198|8712904|8715198 8715436|8715436|8715436 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R - 8715284 8715336 3'utr Cks85A FlyBase G36998.1 TAAGAAACCATAGCTTTAGGGTTCAGCTGGGAAGTTCAAAGACACGAAACGAA 15 8715326 0.961883877 4 14 71 0.925925926 1.397940009 0 0.466666667 0.703703704 15 2 0 25 3R:8715284-8715336 8 16.5 4786 FBgn0037613 139.0166667 24.61 37.97 0.118690804 0.670459163 0.434553595 0 0 0 0.01 dme-miR-33-5p 6mer3-8 CAATGC 3R 8715382 8715387 - 3R_8715382_8715387_- 1 0.833097675 0.916548838 0.118017748 Cks85A FBtr0081949|FBtr0305339|FBtr0337074 8715198|8715198|8712904 8715436|8715436|8715436 3R - 8715341 8715462 stop_codon Cks85A FlyBase G49019.1 AGGCCATCGCGAATCTCTGCGGTTAGGCGGAGGATGCCATGCCGCCGAGGAATGCTCTTCCAAGGACGCACTCGTCAATGCTCACGTAGTATTTCATAAGTTAGCATCAGGCAGCCTGATGT 26 8715384 0.965005246 14 24 127 0.942857143 1.217483944 0.285714286 0.230769231 0.428571429 26 1 1 33 3R:8715341-8715462 6 Cks85A FBtr0305339|FBtr0337074|FBtr0081949 8715198|8712904|8715198 8715436|8715436|8715436 CAATGC 6mer3-8 dme-miR-33-5p 3R - 8715341 8715428 3'utr Cks85A FlyBase G36999.1 TGCCATGCCGCCGAGGAATGCTCTTCCAAGGACGCACTCGTCAATGCTCACGTAGTATTTCATAAGTTAGCATCAGGCAGCCTGATGT 20 8715409 0.9735531 10 19 110 0.942857143 1.51851394 0.371428571 0.5 0.714285714 20 2 0 33 3R:8715341-8715428 6 8 4787 FBgn0037613 139.0166667 24.61 37.97 0.057547057 0.325071109 0.210692652 -3 22 9.5 0.01 dme-miR-7-5p 7mer-A1 TCTTCCA 3R 8715401 8715407 - 3R_8715401_8715407_- 0.823349562 0.823349562 0.823349562 0 Cks85A FBtr0081949|FBtr0305339|FBtr0337074 8715198|8715198|8712904 8715436|8715436|8715436 3R - 8715341 8715462 stop_codon Cks85A FlyBase G49019.1 AGGCCATCGCGAATCTCTGCGGTTAGGCGGAGGATGCCATGCCGCCGAGGAATGCTCTTCCAAGGACGCACTCGTCAATGCTCACGTAGTATTTCATAAGTTAGCATCAGGCAGCCTGATGT 26 8715384 0.965005246 14 24 127 0.942857143 1.217483944 0.285714286 0.230769231 0.428571429 26 1 1 33 3R:8715341-8715462 7 Cks85A FBtr0305339|FBtr0337074|FBtr0081949 8715198|8712904|8715198 8715436|8715436|8715436 TCTTCCA 7mer-A1 dme-miR-7-5p 3R - 8715341 8715428 3'utr Cks85A FlyBase G36999.1 TGCCATGCCGCCGAGGAATGCTCTTCCAAGGACGCACTCGTCAATGCTCACGTAGTATTTCATAAGTTAGCATCAGGCAGCCTGATGT 20 8715409 0.9735531 10 19 110 0.942857143 1.51851394 0.371428571 0.5 0.714285714 20 2 0 33 3R:8715341-8715428 7 4.5 4788 FBgn0037613 139.0166667 24.61 37.97 0.032370219 0.182852499 0.118514617 -23 2 -10.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 3R 8719929 8719935 + 3R_8719929_8719935_+ 0.823349562 0.823349562 0.823349562 0 CG8116 FBtr0300544|FBtr0081905|FBtr0300543 8718041|8718041|8718041 8720339|8720339|8721320 3R + 8719874 8719951 3'utr CG8116 FlyBase G41112.1 CCAGACCTACCGACTGCGCCTGGAGTACTGCCTGTGCACGCTGCAGATCGCCCTTTACCTGACCGAGGTGTGGTATGC 17 8719927 0.964984666 5 17 93 1 1.255272505 0.388888889 0.058823529 0.111111111 17 0 0 18 3R:8719874-8719951 7 CG8116 FBtr0081905|FBtr0300543|FBtr0300544 8718041|8718041|8718041 8720339|8721320|8720339 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R + 8719906 8719947 3'utr CG8116 FlyBase G31019.1 TGTGCACGCTGCAGATCGCCCTTTACCTGACCGAGGTGTGGT 24 8719927 0.747641304 2 23 142 0.973684211 1.568201724 0.631578947 0.375 0.605263158 24 1 0 37 3R:8719906-8719947 7 19.5 4789 FBgn0037614 544.57 26.27333333 40.6 0.035808069 0.742197412 0.480295567 2 2 2 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 8720123 8720129 + 3R_8720123_8720129_+ 0.658999527 0.658999527 0.658999527 0 CG8116 FBtr0300544|FBtr0081905|FBtr0300543 8718041|8718041|8718041 8720339|8720339|8721320 3R + 8720103 8720168 5'utr CG8116 FlyBase G41114.1 AATGAATTTGAAAAGCAGTAGGCAGCTGAATTGCTCATGGCCGTGGAGAAGAGAAACCAAACAGAA 30 8720140 0.945167452 5 29 122 0.972972973 1.556302501 0.324324324 0.166666667 0.324324324 30 1 0 36 3R:8720103-8720168 7 CG8116 FBtr0081905|FBtr0300543|FBtr0300544 8718041|8718041|8718041 8720339|8721320|8720339 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 8720073 8720162 5'utr CG8116 FlyBase G31020.1 AAAAGGATAATATGCGGTGTAAGGAAATTTAATGAATTTGAAAAGCAGTAGGCAGCTGAATTGCTCATGGCCGTGGAGAAGAGAAACCAA 26 8720121 0.947154766 6 26 111 1 1.62324929 0.19047619 0.5 0.69047619 26 0 0 42 3R:8720073-8720162 7 17.5 4790 FBgn0037614 544.57 26.27333333 40.6 0.032135446 0.6660746 0.431034483 -17 2 -7.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 8720513 8720520 + 3R_8720513_8720520_+ 0.63113665 0.63113665 0.63113665 0 CG8116 FBtr0300543 8718041 8721320 3R + 8720460 8720532 3'utr CG8116 FlyBase G41115.1 TAGCTCGAATCTTAAAAAGAATTGTAAAAAAATCAGTGGAATGTCTCACAAAATCTAGTCAGCATCAAAATCA 37 8720513 0.980800892 8 31 224 0.857142857 1.255272505 0 0.108108108 0.214285714 37 5 1 36 3R:8720460-8720532 8 CG8116 FBtr0300543 8718041 8721320 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 8720489 8720531 3'utr CG8116 FlyBase G31022.1 AAATCAGTGGAATGTCTCACAAAATCTAGTCAGCATCAAAATC 22 8720513 0.705455413 5 18 122 0.806451613 0.795880017 0 0.363636364 0.548387097 22 3 3 25 3R:8720489-8720531 8 27.5 4791 FBgn0037614 544.57 26.27333333 40.6 0.050498558 1.046688658 0.677339901 0 0 0 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3R 8720946 8720952 + 3R_8720946_8720952_+ 0.818886615 0.823347808 0.821117211 0.003154545 CG8116 FBtr0300543 8718041 8721320 3R + 8720890 8720965 3'utr CG8116 FlyBase G41117.1 AATCACGCTCAATTATCCCCGCCTGATAGGATCCGAGGATTGCAGCTCCTCCAATGCTAGTCACTAATGTTCACAA 56 8720944 0.78675122 12 53 321 0.955882353 1.812913357 0.088235294 0.178571429 0.323529412 56 3 0 65 3R:8720890-8720965 7 CG8116 FBtr0300543 8718041 8721320 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 8720896 8720963 3'utr CG8116 FlyBase G31023.1 GCTCAATTATCCCCGCCTGATAGGATCCGAGGATTGCAGCTCCTCCAATGCTAGTCACTAATGTTCAC 41 8720944 0.770427732 10 37 240 0.865671642 1.462397998 0.119402985 0.414634146 0.641791045 41 8 1 58 3R:8720896-8720963 7 37.5 4792 FBgn0037614 544.57 26.27333333 40.6 0.068861671 1.427302715 0.92364532 2 2 2 0.01 dme-miR-184-5p 8mer-A1 TGATAAGA 3R 8721003 8721010 + 3R_8721003_8721010_+ 0.601217767 0.601217767 0.601217767 0 CG8116 FBtr0300543 8718041 8721320 3R + 8720975 8721023 3'utr CG8116 FlyBase G41118.1 AAGCTAGACCGAAGATTGTGTAATAATTTGATAAGACCTTTGTGTGGTT 8 8720990 0.968017977 3 8 51 1 1 0 0.25 0.4 8 0 0 10 3R:8720975-8721023 8 CG8116 FBtr0300543 8718041 8721320 TGATAAGA 8mer-A1 dme-miR-184-5p 3R + 8720975 8721029 3'utr CG8116 FlyBase G31024.1 AAGCTAGACCGAAGATTGTGTAATAATTTGATAAGACCTTTGTGTGGTTTCATAG 10 8720990 0.815576875 4 9 56 1 1.176091259 0.4 0.4 0.6 10 0 0 15 3R:8720975-8721029 8 3 4793 FBgn0037614 544.57 26.27333333 40.6 0.005508934 0.114184217 0.073891626 13 13 13 0.01 dme-miR-970-3p 7mer-m8 TCTTATG 3R 8735666 8735672 + 3R_8735666_8735672_+ 0.658999343 0.658999343 0.658999343 0 CG8202 FBtr0081914 8735615 8735837 3R + 8735628 8735687 3'utr CG8202 FlyBase G41138.1 GTAAATCCTATGGTTATTTATTTGCTGAGATTATATATTCTTATGTGCATGAATCTTTTA 24 8735664 0.991982066 6 23 274 0.965517241 1.447158031 0.275862069 0.166666667 0.310344828 24 1 0 28 3R:8735628-8735687 7 CG8202 FBtr0081914 8735615 8735837 TCTTATG 7mer-m8 dme-miR-970-3p 3R + 8735628 8735686 3'utr CG8202 FlyBase G31039.1 GTAAATCCTATGGTTATTTATTTGCTGAGATTATATATTCTTATGTGCATGAATCTTTT 31 8735663 0.993303019 7 30 361 0.98 1.389166084 0.32 0.387096774 0.62 31 0 1 49 3R:8735628-8735686 7 24 4794 FBgn0037622 349.97 13.58666667 20.66666667 0.068577307 1.766437684 1.161290323 2 3 2.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 8753966 8753971 + 3R_8753966_8753971_+ 0.999035988 1 0.999517994 0.000681651 CG8223 FBtr0081915|FBtr0308889 8753798|8753798 8754104|8754104 3R + 8753895 8754049 3'utr CG8223 FlyBase G41153.1 ACGCATTAAACACCATTCAACTGTCCTATACCTCGAACCTACATATTTATGCTACTTGTTTGCTGTTTTCTACCAAAATTCTCTGTAAGTCTGTAAGTTTACAATCACAATTAGTGCTAAGTGCGTACATAAAATAATGTTTTGTATTAAAAGAA 56 8753954 0.988430915 21 55 511 0.985294118 1.525044807 0.147058824 0.214285714 0.352941176 56 0 1 67 3R:8753895-8754049 6 CG8223 FBtr0081915|FBtr0308889 8753798|8753798 8754104|8754104 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 8753896 8754017 3'utr CG8223 FlyBase G31048.1 CGCATTAAACACCATTCAACTGTCCTATACCTCGAACCTACATATTTATGCTACTTGTTTGCTGTTTTCTACCAAAATTCTCTGTAAGTCTGTAAGTTTACAATCACAATTAGTGCTAAGTG 39 8753963 0.983764645 14 38 323 0.98245614 1.748188027 0.140350877 0.307692308 0.526315789 39 1 0 56 3R:8753896-8754017 6 25 4795 FBgn0037624 1739.743333 106.23 163.4833333 0.014369936 0.235338417 0.152920787 12 3 7.5 0.01 dme-miR-33-5p 7mer-m8 CAATGCA 3R 8774386 8774392 - 3R_8774386_8774392_- 0.654500577 0.608753794 0.631627186 0.032347872 Pif1B FBtr0332503|FBtr0091716|FBtr0091717|FBtr0332504 8774284|8774284|8774284|8774284 8774612|8774612|8774612|8774612 3R - 8774356 8774515 3'utr Pif1B FlyBase G49033.1 TATAGCGTATTGATATGTAGTGTTTGTTAAGAGTTCTTTATCTGGAGGATACCAATTGAAATCGTCTGTACGTAGTGCTTTGCATAGTGCCTTAAATCGTAATAGTATATCGTAAGCAAATATCAATGCATTGTAATGGAATTGAAAGCAGGTGGCTTCA 162 8774379 0.984877627 22 155 1255 0.943877551 2.267171728 0.076530612 0.179012346 0.321428571 162 11 0 185 3R:8774356-8774515 7 Pif1B FBtr0332504|FBtr0091717|FBtr0091716|FBtr0332503 8774284|8774284|8774284|8774284 8774612|8774612|8774612|8774612 CAATGCA 7mer-m8 dme-miR-33-5p 3R - 8774356 8774418 3'utr Pif1B FlyBase G37011.1 CGTAATAGTATATCGTAAGCAAATATCAATGCATTGTAATGGAATTGAAAGCAGGTGGCTTCA 100 8774379 0.76898868 7 90 740 0.927631579 1.547159121 0.059210526 0.35 0.572368421 100 8 3 141 3R:8774356-8774418 7 114 4796 FBgn0046874 160.93 2.47 3.813333333 0.708382527 46.15384615 29.8951049 -13 -13 -13 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 3R 8806074 8806080 + 3R_8806074_8806080_+ 0.620204266 0.620204266 0.620204266 0 Tcp-1eta FBtr0081918 8806018 8806234 3R + 8806037 8806111 3'utr Tcp-1eta FlyBase G41163.1 TCCAGAGAACACTACACCCTAATCATCAAAACTCACTTGCATTTCTCTCCTAATTTAACACGTACACGTATTACT 65 8806073 0.945176488 10 59 501 0.952941176 1.908485019 0.035294118 0.261538462 0.435294118 65 4 0 81 3R:8806037-8806111 7 Tcp-1eta FBtr0081918 8806018 8806234 TGCATTT 7mer-m8 dme-miR-277-3p 3R + 8806039 8806143 3'utr Tcp-1eta FlyBase G31058.1 CAGAGAACACTACACCCTAATCATCAAAACTCACTTGCATTTCTCTCCTAATTTAACACGTACACGTATTACTCGGTCATACCTTCGCATTTCGCACGCTTCGAA 34 8806073 0.986595955 13 32 271 0.954545455 1.62324929 0.068181818 0.235294118 0.409090909 34 2 0 42 3R:8806039-8806143 7 36 4797 FBgn0037632 3686.506667 229.3533333 352.0766667 0.009765342 0.156963056 0.102250457 1 1 1 0.01 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 8807216 8807223 + 3R_8807216_8807223_+ 0.479076928 0.625364144 0.552220536 0.103440671 hng2 FBtr0081919 8807182 8807581 3R + 8807187 8807258 3'utr hng2 FlyBase G41170.1 TTCACTACAGAAGTCAAATCATTTACAAATGCATTTACAAGAAGGGCAAAATTCGTTTAACAGCAAGTTAAC 16 8807216 0.96443678 5 15 79 1 1.278753601 0.315789474 0.1875 0.315789474 16 0 0 19 3R:8807187-8807258 8 hng2 FBtr0081919 8807182 8807581 TGCATTTA 8mer-A1 dme-miR-277-3p 3R + 8807195 8807249 3'utr hng2 FlyBase G31063.1 AGAAGTCAAATCATTTACAAATGCATTTACAAGAAGGGCAAAATTCGTTTAACAG 12 8807220 0.952218411 6 11 53 0.866666667 1.113943352 0.466666667 0.25 0.4 12 2 0 13 3R:8807195-8807249 8 5.5 4798 FBgn0037634 138.6666667 14.15666667 21.7 0.039663462 0.388509536 0.253456221 0 -4 -2 0.01 dme-miR-995-5p 6mer3-8 AATTCG 3R 8807236 8807241 + 3R_8807236_8807241_+ 1 1 1 0 hng2 FBtr0081919 8807182 8807581 3R + 8807187 8807258 3'utr hng2 FlyBase G41170.1 TTCACTACAGAAGTCAAATCATTTACAAATGCATTTACAAGAAGGGCAAAATTCGTTTAACAGCAAGTTAAC 16 8807216 0.96443678 5 15 79 1 1.278753601 0.315789474 0.1875 0.315789474 16 0 0 19 3R:8807187-8807258 6 hng2 FBtr0081919 8807182 8807581 AATTCG 6mer3-8 dme-miR-995-5p 3R + 8807195 8807249 3'utr hng2 FlyBase G31063.1 AGAAGTCAAATCATTTACAAATGCATTTACAAGAAGGGCAAAATTCGTTTAACAG 12 8807220 0.952218411 6 11 53 0.866666667 1.113943352 0.466666667 0.25 0.4 12 2 0 13 3R:8807195-8807249 6 4.5 4799 FBgn0037634 138.6666667 14.15666667 21.7 0.032451923 0.317871439 0.207373272 20 16 18 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3R 8807462 8807467 + 3R_8807462_8807467_+ 1 1 1 0 hng2 FBtr0081919 8807182 8807581 3R + 8807433 8807497 3'utr hng2 FlyBase G41171.1 GCGTCAAATAGTTTTCTCATAGTAACTTCTGTGTTTTGCGCAATGTATATATTATACGCTTACTT 6 8807468 0.987686006 6 6 55 1 0.954242509 0.444444444 0.333333333 0.555555556 6 0 0 9 3R:8807433-8807497 6 hng2 FBtr0081919 8807182 8807581 TGTGTT 6mer3-8 dme-miR-317-3p 3R + 8807444 8807473 3'utr hng2 FlyBase G31064.1 TTTTCTCATAGTAACTTCTGTGTTTTGCGC 9 8807468 0.799595948 4 8 86 0.928571429 0.812913357 0.785714286 0.222222222 0.5 9 0 1 13 3R:8807444-8807473 6 6 4800 FBgn0037634 138.6666667 14.15666667 21.7 0.043269231 0.423828585 0.276497696 -6 -6 -6 0.01 dme-miR-276a-3p 7mer-A1 GTTCCTA 3R 8814045 8814051 - 3R_8814045_8814051_- 0.823349562 0.823349562 0.823349562 0 CG9821 FBtr0334659 8813488 8817862 3R - 8814032 8814095 3'utr CG9821 FlyBase G49074.1 GAACCATTTCCAACTCCGTTTCGATGTGAAAAACTATCCTGATTGTTCCTATGTTAGTTCTGAG 9 8814053 0.992959407 3 7 89 0.916666667 1.041392685 0.416666667 0.333333333 0.5 9 1 0 11 3R:8814032-8814095 7 CG9821 FBtr0334659 8813488 8817862 GTTCCTA 7mer-A1 dme-miR-276a-3p 3R - 8813991 8814068 3'utr CG9821 FlyBase G37039.1 GAAAAACTATCCTGATTGTTCCTATGTTAGTTCTGAGTAGATGCAACCGCAATCGGATCGGCGAATCCATTAACAACT 10 8814053 0.993970706 4 8 95 0.785714286 1.041392685 0.214285714 0.4 0.571428571 10 3 0 11 3R:8813991-8814068 7 7.5 4801 FBgn0037636 4388.82 121.91 186.95 0.001708888 0.061520794 0.040117679 2 2 2 0.01 dme-miR-33-5p 6mer2-7 AATGCA 3R 8814154 8814159 - 3R_8814154_8814159_- 1 1 1 0 CG9821 FBtr0334659 8813488 8817862 3R - 8814107 8814176 3'utr CG9821 FlyBase G49075.1 CCAGATATTGCGACATAAATGCATGCAAAGTAAAATAAAACGATAAGCAACTTTACAGAGCCGAAGGGCA 25 8814156 0.962702372 8 25 125 1 1.462397998 0 0.16 0.275862069 25 0 0 29 3R:8814107-8814176 6 CG9821 FBtr0334659 8813488 8817862 AATGCA 6mer2-7 dme-miR-33-5p 3R - 8814145 8814182 3'utr CG9821 FlyBase G37040.1 AAACACCCAGATATTGCGACATAAATGCATGCAAAGTA 14 8814156 0.850563049 5 11 72 0.84 1.322219295 0.08 0.5 0.72 14 4 0 21 3R:8814145-8814182 6 18.5 4802 FBgn0037636 4388.82 121.91 186.95 0.004215256 0.151751292 0.09895694 -3 -3 -3 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 8814959 8814964 - 3R_8814959_8814964_- 1 1 1 0 CG9821 FBtr0081931|FBtr0334660|FBtr0334659 8814683|8814683|8813488 8817862|8817862|8817862 3R - 8814854 8815027 3'utr CG9821 FlyBase G49079.1 CGTCGTTCTAAAAACAATGAAAAGAAAGCAACCAAGCACTATGTATTTTTTTAATTTCTCCATTGATCTAATTTACAATTTAATTTGCAATTTTTTGTGATACTTTGCTATATTTTTAAACCTGGTATGTATACAAATTAAAAACAAATACAACTGAAGAGAAAACGATTAATT 320 8814965 0.990761197 33 313 3243 0.984848485 2.113943352 0.075757576 0.1875 0.343434343 320 4 2 390 3R:8814854-8815027 6 CG9821 FBtr0334659|FBtr0081931|FBtr0334660 8813488|8814683|8814683 8817862|8817862|8817862 TGATCT 6mer3-8 dme-bantam-3p 3R - 8814854 8814986 3'utr CG9821 FlyBase G37044.2 TGTATTTTTTTAATTTCTCCATTGATCTAATTTACAATTTAATTTGCAATTTTTTGTGATACTTTGCTATATTTTTAAACCTGGTATGTATACAAATTAAAAACAAATACAACTGAAGAGAAAACGATTAATT 238 8814965 0.991323228 28 232 2525 0.976331361 2.041392685 0.050295858 0.327731092 0.526627219 238 6 2 330 3R:8814854-8814986 6 126.5 4803 FBgn0037636 4388.82 121.91 186.95 0.028823237 1.037650726 0.676651511 1 1 1 0.01 dme-miR-305-5p 8mer-A1 AGTACAAA 3R 8815254 8815261 - 3R_8815254_8815261_- 0.605654138 0.605654138 0.605654138 0 CG9821 FBtr0081931|FBtr0334660|FBtr0334659 8814683|8814683|8813488 8817862|8817862|8817862 3R - 8815244 8815536 3'utr CG9821 FlyBase G49081.1 ACCCCACAGAAAGACCCAAAACTTGTCGCGCAGAATTTTGCATTTTTTTTAAGTGTAAGCAAAACGTTTGTTACTTACTGGACGTCAGTTTAAGCGGAGAACAGCTTAGATTTCATTGAAGCAGGATAGAGATACAGATGCAAAACCTATTTGTAAAATTCAAAAGAAGAGAAAACCACTTTACTTAAAACAGACCAAAACAGCCCAGATTCGCCCGCTCTGCCTTGGACTGTGGGCACAAACGTTCCGGCCCGCTGACTTTTTCAACACCAATCAGTACAAAATAATTTCCA 284 8815263 0.984709519 42 268 2152 0.93982808 1.913813852 0.283667622 0.169014085 0.323782235 284 18 3 328 3R:8815244-8815536 8 CG9821 FBtr0334659|FBtr0081931|FBtr0334660 8813488|8814683|8814683 8817862|8817862|8817862 AGTACAAA 8mer-A1 dme-miR-305-5p 3R - 8815160 8815373 3'utr CG9821 FlyBase G37045.1 AAGAAGAGAAAACCACTTTACTTAAAACAGACCAAAACAGCCCAGATTCGCCCGCTCTGCCTTGGACTGTGGGCACAAACGTTCCGGCCCGCTGACTTTTTCAACACCAATCAGTACAAAATAATTTCCATTTCAATGTTGGGAGCCCGAAACAAGATCGCGGCGGAGCTCTCCATGCTGCGAGTCCAAGGCGTTTGTGTCCCCAACCAAGGCG 90 8815263 0.957297122 20 87 418 0.96124031 1.61630043 0.085271318 0.3 0.511627907 90 3 2 124 3R:8815160-8815373 8 33 4804 FBgn0037636 4388.82 121.91 186.95 0.007519105 0.270691494 0.176517786 2 2 2 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 3R 8815492 8815498 - 3R_8815492_8815498_- 0.620204266 0.620204266 0.620204266 0 CG9821 FBtr0081931|FBtr0334660|FBtr0334659 8814683|8814683|8813488 8817862|8817862|8817862 3R - 8815244 8815536 3'utr CG9821 FlyBase G49081.1 ACCCCACAGAAAGACCCAAAACTTGTCGCGCAGAATTTTGCATTTTTTTTAAGTGTAAGCAAAACGTTTGTTACTTACTGGACGTCAGTTTAAGCGGAGAACAGCTTAGATTTCATTGAAGCAGGATAGAGATACAGATGCAAAACCTATTTGTAAAATTCAAAAGAAGAGAAAACCACTTTACTTAAAACAGACCAAAACAGCCCAGATTCGCCCGCTCTGCCTTGGACTGTGGGCACAAACGTTCCGGCCCGCTGACTTTTTCAACACCAATCAGTACAAAATAATTTCCA 284 8815499 0.984709519 42 268 2152 0.93982808 1.913813852 0.283667622 0.169014085 0.323782235 284 18 3 328 3R:8815244-8815536 7 CG9821 FBtr0334659|FBtr0081931|FBtr0334660 8813488|8814683|8814683 8817862|8817862|8817862 TGCATTT 7mer-m8 dme-miR-277-3p 3R - 8815375 8815525 3'utr CG9821 FlyBase G37046.1 AGACCCAAAACTTGTCGCGCAGAATTTTGCATTTTTTTTAAGTGTAAGCAAAACGTTTGTTACTTACTGGACGTCAGTTTAAGCGGAGAACAGCTTAGATTTCATTGAAGCAGGATAGAGATACAGATGCAAAACCTATTTGTAAAATTCA 115 8815499 0.983829572 26 107 1106 0.915662651 2.181843588 0.391566265 0.339130435 0.542168675 115 14 0 152 3R:8815375-8815525 7 98.5 4805 FBgn0037636 4388.82 121.91 186.95 0.02244339 0.807973095 0.526878845 1 1 1 0.01 dme-miR-12-5p 6mer3-8 AATACT 3R 8816157 8816162 - 3R_8816157_8816162_- 1 1 1 0 CG9821 FBtr0081931|FBtr0334660|FBtr0334659 8814683|8814683|8813488 8817862|8817862|8817862 3R - 8816098 8816326 3'utr CG9821 FlyBase G49083.1 TATGTTTGATCTTGCGCCGAGCGGAAACAACAATTGTGAAAACAACTAAAAACTATATAAGTTGCAATCCCCAAAGCGAAGGCTTTACGAGAGAGGAAAAGATATAGTAATCGCGAGATGAGAATGAAATGAAACTACTTTATGTAAACTATTCGTTGATGCTCAATACTGAAACACTTGAACCCAGTACCTTATTTTCATTATTAGCATTACTTATTAATTGTTAATA 970 8816170 0.933809347 49 921 6839 0.948497854 2.140272291 0.098712446 0.16185567 0.302145923 970 53 7 1105 3R:8816098-8816326 6 CG9821 FBtr0334659|FBtr0081931|FBtr0334660 8813488|8814683|8814683 8817862|8817862|8817862 AATACT 6mer3-8 dme-miR-12-5p 3R - 8815675 8816324 3'utr CG9821 FlyBase G37047.2 TGTTTGATCTTGCGCCGAGCGGAAACAACAATTGTGAAAACAACTAAAAACTATATAAGTTGCAATCCCCAAAGCGAAGGCTTTACGAGAGAGGAAAAGATATAGTAATCGCGAGATGAGAATGAAATGAAACTACTTTATGTAAACTATTCGTTGATGCTCAATACTGAAACACTTGAACCCAGTACCTTATTTTCATTATTAGCATTACTTATTAATTGTTAATATTAATATGTATGTAAATTATTTAAGCCATCCCAAGCCTCCCACACTTCCAGATATCCTCAGCCAATCCAAAGTTATTTGTATTTTGCGTAGAAAGAGGCAGCGTGAGTTTTGTTATGTGTTTTTGCCAAGTGAATTGGCACCGAAGTGATAAGCCAAAAACAAAAGGAACCCCAAAATGTAAATGATAGTGGAAAATCCCAGAAATAAGATCGCACTTGAGTTTTGTTTACGCATATTGTTTAACTTCCCGAACCATCTAAATTATGAAACACGAGAATGAGAGATGAAAAGATATGAAACTATAACAAAACACTCGATGATAGTTTTAAAAATGTTGAAAAGCCAAAAAAGTCAAGTACTGTTTAGGTTTACTGAGCAAGTTGTCATATATTGGTAGCTTTAAAGCTTGTATCTTCAAGTTA 1043 8816170 0.932668009 110 962 7064 0.926234766 1.904294688 0.12508018 0.37008629 0.57857601 1043 98 17 1444 3R:8815675-8816324 6 512 4806 FBgn0037636 4388.82 121.91 186.95 0.116660059 4.199819539 2.738700187 8 8 8 0.01 dme-bantam-3p 8mer-A1 TGATCTCA 3R 8817547 8817554 - 3R_8817547_8817554_- 0.556200561 0.513675863 0.534938212 0.030069504 CG9821 FBtr0081931|FBtr0334660|FBtr0334659 8814683|8814683|8813488 8817862|8817862|8817862 3R - 8817404 8817579 3'utr CG9821 FlyBase G49088.1 AAAAAAAAAACAAGAGTAATGTTTGTGATCTCAAGTGTGTATCATAAAACAATTAAACCAATTTGAGAAGCTATTAGGTGAGAAGAGAAAAACTGTTTCAAGAAAAGAAAACTGAAAGCAAACAAAATACAAGTAAAAAACACACAAACTACTGTCCTCACACAACCGACCGACAA 1553 8817555 0.986457162 31 1472 12650 0.950578339 2.143255074 0.087276551 0.186735351 0.335962145 1553 82 12 1808 3R:8817404-8817579 8 CG9821 FBtr0334659|FBtr0081931|FBtr0334660 8813488|8814683|8814683 8817862|8817862|8817862 TGATCTCA 8mer-A1 dme-bantam-3p 3R - 8817411 8817633 3'utr CG9821 FlyBase G37051.1 AAAAAAAGCGAAAACATTTCAACTGGAAATTTGAACTTTTTTAAACAAAAACAAAAAAAAAAAACAAGAGTAATGTTTGTGATCTCAAGTGTGTATCATAAAACAATTAAACCAATTTGAGAAGCTATTAGGTGAGAAGAGAAAAACTGTTTCAAGAAAAGAAAACTGAAAGCAAACAAAATACAAGTAAAAAACACACAAACTACTGTCCTCACACAACCGA 1326 8817555 0.977850059 33 1250 10639 0.949243533 1.92719177 0.105417277 0.386877828 0.603221083 1326 82 22 1945 3R:8817411-8817633 8 1295 4807 FBgn0037636 4388.82 121.91 186.95 0.295067923 10.62259044 6.926985825 1 1 1 0.01 dme-miR-2b-2-5p 6mer2-7 TGAAGA 3R 8817786 8817791 - 3R_8817786_8817791_- 1 1 1 0 CG9821 FBtr0081931|FBtr0334660|FBtr0334659 8814683|8814683|8813488 8817862|8817862|8817862 3R - 8817638 8818026 stop_codon CG9821 FlyBase G49090.1 CACCGCAGCACTGGACGTTGTCCAGGTCGGAGGGTAAGCTTCCCATGATGATGCCGTCGATGCCCAAGTTCCAGGTGCCGATGCAGACAGGCCGCTCGAAGCGGAATCTCCTCGATGACTTCGACACGCACAACCTAAAGTTGCTGCTCAATGTGCAGTCGTAACCACACTGGTGCTGGAGGATCAGTGTCTGGAGTAGGAAAGCAGGAACAGGATCTGGATCTAGAGCTGGATCTGAAGATGGATCTGGAGGACCGACATGAATGGCAAGAACACCCGGTGGACCCCGAACCCGTCAATGAGTTGCAAAAAAAAATCGATATGAACATAAAACCAACAAAAAAAAATTAACAAAAACATAAAACAAAAAATGGAAAATGAAAAAACTT 186 8817809 0.950682704 41 178 780 0.954545455 2.322219295 0.236363636 0.14516129 0.277272727 186 10 0 210 3R:8817638-8818026 6 CG9821 FBtr0334659|FBtr0081931|FBtr0334660 8813488|8814683|8814683 8817862|8817862|8817862 TGAAGA 6mer2-7 dme-miR-2b-2-5p 3R - 8817720 8817885 stop_codon CG9821 FlyBase G37053.1 TGCTGCTCAATGTGCAGTCGTAACCACACTGGTGCTGGAGGATCAGTGTCTGGAGTAGGAAAGCAGGAACAGGATCTGGATCTAGAGCTGGATCTGAAGATGGATCTGGAGGACCGACATGAATGGCAAGAACACCCGGTGGACCCCGAACCCGTCAATGAGTTGC 75 8817809 0.946925359 22 71 270 0.941747573 1.986771734 0.203883495 0.306666667 0.495145631 75 6 0 97 3R:8817720-8817885 6 23.5 4808 FBgn0037636 4388.82 121.91 186.95 0.005354514 0.192765155 0.125702059 18 18 18 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 8822988 8822993 - 3R_8822988_8822993_- 1 1 1 0 CG9836 FBtr0081930 8822847 8823423 3R - 8822950 8823063 3'utr CG9836 FlyBase G49097.1 CGCGTGACTGCTGATAAGTGCATAGAAGTTTAGGAATCGTCTGTCATTGATACTAAAGGATAGCTGGAACTGATCTTGTATGAATGCATATGCACGTGTGTGTTTTGTAGGGGA 62 8822991 0.979749146 16 58 406 0.930555556 1.826074803 0.097222222 0.129032258 0.25 62 5 0 67 3R:8822950-8823063 6 CG9836 FBtr0081930 8822847 8823423 TGATCT 6mer3-8 dme-bantam-3p 3R - 8822968 8823048 3'utr CG9836 FlyBase G37067.1 AAGTGCATAGAAGTTTAGGAATCGTCTGTCATTGATACTAAAGGATAGCTGGAACTGATCTTGTATGAATGCATATGCACG 46 8822992 0.97224604 14 45 277 0.985915493 1.84509804 0.126760563 0.391304348 0.605633803 46 1 0 70 3R:8822968-8823048 6 38.5 4809 FBgn0037637 411.3666667 53.83333333 81.98666667 0.093590471 0.715170279 0.469588551 -2 -1 -1.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 8823403 8823408 - 3R_8823403_8823408_- 1 1 1 0 CG9836 FBtr0081930|FBtr0081930|FBtr0081930 8822847|8822847|8822847 8823423|8823423|8823423 3R - 8823365 8823437 stop_codon CG9836 FlyBase G49099.1 AGGTGGCCAACTGAGAGGCGGAACGGAATCTGTGAATGTAGTGGAGCGTTTCTCTGAACAACTACTAAAAAAA 315 8823409 0.955159775 9 307 1417 0.978378378 2.257678575 0.467567568 0.142857143 0.27027027 315 7 1 362 3R:8823365-8823437 6 CG9836 FBtr0081930|FBtr0081930|FBtr0081930 8822847|8822847|8822847 8823423|8823423|8823423 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 8823372 8823446 stop_codon CG9836 FlyBase G37069.1 AGCAGAAGAAGGTGGCCAACTGAGAGGCGGAACGGAATCTGTGAATGTAGTGGAGCGTTTCTCTGAACAACTACT 212 8823409 0.902667077 8 208 953 0.987878788 2.5132176 0.442424242 0.391509434 0.609090909 212 4 0 326 3R:8823372-8823446 6 253.5 4810 FBgn0037637 411.3666667 53.83333333 81.98666667 0.616238554 4.708978328 3.091966173 1 1 1 0.01 dme-miR-92b-3p 6mer2-7 TGCAAT 3R 8827830 8827835 - 3R_8827830_8827835_- 0.999994627 0.999553383 0.999774005 0.000311976 pyd FBtr0305301|FBtr0310205|FBtr0305297|FBtr0305304|FBtr0305298|FBtr0305299|FBtr0305296|FBtr0305295 8827496|8827066|8827496|8827496|8827496|8827496|8827496|8827066 8828314|8828094|8828094|8828314|8828314|8828314|8828314|8828314 3R - 8827783 8827858 3'utr pyd FlyBase G49103.1 GAGCTAGAAATTAATCAATCGAATGCAATGGATACTTGTATAAAGCGACTAGAATTTAATTTCATACACAAATTAT 26 8827835 0.973883204 7 26 163 1 1.531478917 0.117647059 0.230769231 0.411764706 26 0 0 34 3R:8827783-8827858 6 pyd FBtr0305296|FBtr0305295|FBtr0305298|FBtr0305299|FBtr0305297|FBtr0305304|FBtr0305301|FBtr0310205 8827496|8827066|8827496|8827496|8827496|8827496|8827496|8827066 8828314|8828314|8828314|8828314|8828094|8828314|8828314|8828094 TGCAAT 6mer2-7 dme-miR-92b-3p 3R - 8827788 8827925 3'utr pyd FlyBase G37074.1 AATTCGATATTGTCTGTTAATTGTGCCTTTAAGTGATCGTTTGGCTCTGCCTCTGAACTATTATATCGAGCTAGAAATTAATCAATCGAATGCAATGGATACTTGTATAAAGCGACTAGAATTTAATTTCATACACAA 48 8827835 0.982303009 23 45 371 0.961038961 1.392110465 0.12987013 0.375 0.61038961 48 1 2 74 3R:8827788-8827925 6 22.5 4811 FBgn0262614 694.76 11.98333333 18.49333333 0.032385284 1.877607789 1.21665465 0 0 0 0.01 dme-miR-305-3p 6mer2-7 TGTGCC 3R 8827899 8827904 - 3R_8827899_8827904_- 1 1 1 0 pyd FBtr0305301|FBtr0310205|FBtr0305297|FBtr0305304|FBtr0305298|FBtr0305299|FBtr0305296|FBtr0305295 8827496|8827066|8827496|8827496|8827496|8827496|8827496|8827066 8828314|8828094|8828094|8828314|8828314|8828314|8828314|8828314 3R - 8827859 8827903 3'utr pyd FlyBase G49104.1 GTGCCTTTAAGTGATCGTTTGGCTCTGCCTCTGAACTATTATATC 32 8827885 0.710068628 11 28 282 0.944444444 1.531478917 0.472222222 0.0625 0.166666667 32 2 0 34 3R:8827859-8827903 5 pyd FBtr0305296|FBtr0305295|FBtr0305298|FBtr0305299|FBtr0305297|FBtr0305304|FBtr0305301|FBtr0310205 8827496|8827066|8827496|8827496|8827496|8827496|8827496|8827066 8828314|8828314|8828314|8828314|8828094|8828314|8828314|8828094 TGTGCC 6mer2-7 dme-miR-305-3p 3R - 8827788 8827925 3'utr pyd FlyBase G37074.1 AATTCGATATTGTCTGTTAATTGTGCCTTTAAGTGATCGTTTGGCTCTGCCTCTGAACTATTATATCGAGCTAGAAATTAATCAATCGAATGCAATGGATACTTGTATAAAGCGACTAGAATTTAATTTCATACACAA 48 8827886 0.982303009 23 45 371 0.961038961 1.392110465 0.12987013 0.375 0.61038961 48 1 2 74 3R:8827788-8827925 6 17 4812 FBgn0262614 694.76 11.98333333 18.49333333 0.024468881 1.418636996 0.91925018 -19 -18 -18.5 0.01 dme-miR-1007-3p 6mer3-8 TGAGCT 3R 8827972 8827977 - 3R_8827972_8827977_- 1 1 1 0 pyd FBtr0305301|FBtr0310205|FBtr0305297|FBtr0305304|FBtr0305298|FBtr0305299|FBtr0305296|FBtr0305295 8827496|8827066|8827496|8827496|8827496|8827496|8827496|8827066 8828314|8828094|8828094|8828314|8828314|8828314|8828314|8828314 3R - 8827904 8828033 3'utr pyd FlyBase G49104.2 TAGATCCGTAGTATCATATGTGTAGTCTTAGGGCCGCAATTCCAGGGCAGACGAAATGAGCTGAGCAAAGAGGTAGTATAGGCATTGCTTATATAATATAATAAATTTAATTCGATATTGTCTGTTAATT 55 8827977 0.987064342 13 51 311 0.984848485 1.812913357 0.136363636 0.127272727 0.272727273 55 1 0 65 3R:8827904-8828033 6 pyd FBtr0305296|FBtr0305295|FBtr0305298|FBtr0305299|FBtr0305297|FBtr0305304|FBtr0305301|FBtr0310205 8827496|8827066|8827496|8827496|8827496|8827496|8827496|8827066 8828314|8828314|8828314|8828314|8828094|8828314|8828314|8828094 TGAGCT 6mer3-8 dme-miR-1007-3p 3R - 8827942 8828182 stop_codon pyd FlyBase G37075.1 GAAGAATCTGCACACCGAGTGGGACAACATCGACCTGCCCAGCAATGCCGCCGCTCACACGGTCTCCGTCAAGGTGGATCACTTCTAATCATTAAGATTCATAGCACTACCATTCACCAGCCAACTTGAACGATATACGAAATTGTAAATAGATCCGTAGTATCATATGTGTAGTCTTAGGGCCGCAATTCCAGGGCAGACGAAATGAGCTGAGCAAAGAGGTAGTATAGGCATTGCTTAT 44 8827977 0.963941579 22 40 204 0.917808219 1.525044807 0.164383562 0.386363636 0.630136986 44 5 1 67 3R:8827942-8828182 6 11 4813 FBgn0262614 694.76 11.98333333 18.49333333 0.015832806 0.917941586 0.59480894 0 0 0 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3R 8942452 8942458 + 3R_8942452_8942458_+ 0.521223855 0.521223855 0.521223855 0 skap FBtr0334328|FBtr0334327 8942073|8942073 8942557|8942557 3R + 8942412 8942471 3'utr skap FlyBase G41209.1 ACGTGAATAATAGAAAATGGAAATGAAAATACGTTTTAATTGTGATTTTTGCAAAAGTTC 29 8942458 0.991705167 6 27 299 0.948717949 1.267171728 0.358974359 0.206896552 0.41025641 29 1 1 37 3R:8942412-8942471 7 skap FBtr0334328|FBtr0334327 8942073|8942073 8942557|8942557 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 8942403 8942539 3'utr skap FlyBase G31087.1 ATTAATTGCACGTGAATAATAGAAAATGGAAATGAAAATACGTTTTAATTGTGATTTTTGCAAAAGTTCATTTAAATTTTATTTATTGAAATGTGACCCTGCTTTTAAAGCAGATCCATCATCTTGTGTATTATCCT 41 8942451 0.991400554 16 39 410 0.943396226 1.698970004 0.264150943 0.219512195 0.396226415 41 3 0 50 3R:8942403-8942539 7 26.5 4814 FBgn0037643 1428.996667 91.75333333 140.5033333 0.01854448 0.288817845 0.188607625 -6 1 -2.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 8982673 8982680 + 3R_8982673_8982680_+ 0.650170222 0.650136539 0.650153381 2.38E-05 CAHbeta FBtr0340014|FBtr0340014|FBtr0340014 8981922|8981922|8981922 8982793|8982793|8982793 3R + 8982587 8982709 3'utr CAHbeta FlyBase G41212.1 GATGAAGACACCGTGGATCGATTGTCCGAGGAGGTCAGAAGATTCTATTCGTAGGCGAAACATGCCAAGAGGACCAAATGGATTATCTGTGATATGTGGGCCTTATACCGCGATCGGCATTTA 144 8982672 0.964113334 14 134 1299 0.93452381 1.894869657 0.107142857 0.118055556 0.244047619 144 10 1 157 3R:8982587-8982709 8 CAHbeta FBtr0340014|FBtr0340014|FBtr0340014 8981922|8981922|8981922 8982793|8982793|8982793 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 8982639 8982699 3'utr CAHbeta FlyBase G31089.1 AGGCGAAACATGCCAAGAGGACCAAATGGATTATCTGTGATATGTGGGCCTTATACCGCGA 97 8982672 0.869174298 11 92 907 0.955128205 1.571126277 0.102564103 0.381443299 0.615384615 97 4 3 149 3R:8982639-8982699 8 113 4815 FBgn0037646 43.33333333 4.79 7.23 2.607692308 23.5908142 15.62932227 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3R 8982994 8982999 - 3R_8982994_8982999_- 1 1 1 0 RagA-B FBtr0082013 8982730 8983112 3R - 8982977 8983061 3'utr RagA-B FlyBase G49168.1 GTTCAAAAAGACATGAATACCGTCTGTTGTTTTGCAAACATCGAAGCGCCCAAGGTGCCGCCCCAAAGTCTTACAGCTTCCCGTA 30 8983006 0.947835374 6 28 93 0.96875 1.491361694 0.125 0.066666667 0.125 30 1 0 31 3R:8982977-8983061 6 RagA-B FBtr0082013 8982730 8983112 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 8982976 8983055 3'utr RagA-B FlyBase G37123.1 AAAGACATGAATACCGTCTGTTGTTTTGCAAACATCGAAGCGCCCAAGGTGCCGCCCCAAAGTCTTACAGCTTCCCGTAA 14 8983006 0.99990894 4 13 64 0.95 0.977723605 0.15 0.285714286 0.5 14 0 1 19 3R:8982976-8983055 6 14 4816 FBgn0037647 218.6666667 19.01 29.22 0.06402439 0.736454498 0.479123888 7 7 7 0.01 dme-miR-252-5p 7mer-m8 GTACTTA 3R 8990767 8990773 - 3R_8990767_8990773_- 0.588299917 0.588299917 0.588299917 0 E(var)3-9 FBtr0082012 8990643 8990929 3R - 8990760 8990790 3'utr E(var)3-9 FlyBase G49175.1 TATAATTGGTTGGCGAAGTACTTACATTCGA 11 8990783 0.755218289 6 9 83 0.846153846 1.041392685 0.230769231 0.181818182 0.307692308 11 2 0 11 3R:8990760-8990790 7 E(var)3-9 FBtr0082012 8990643 8990929 GTACTTA 7mer-m8 dme-miR-252-5p 3R - 8990756 8990793 3'utr E(var)3-9 FlyBase G37127.1 TTATATAATTGGTTGGCGAAGTACTTACATTCGAATTT 10 8990781 0.787384903 4 9 78 0.933333333 1.146128036 0.466666667 0.3 0.533333333 10 1 0 14 3R:8990756-8990793 7 10.5 4817 FBgn0260243 317.3333333 18.07666667 27.69333333 0.033088235 0.580859303 0.379152624 10 8 9 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3R 8994697 8994702 + 3R_8994697_8994702_+ 1 1 1 0 CG11975 FBtr0081960|FBtr0336753 8994632|8994632 8994839|8995212 3R + 8994646 8994734 3'utr CG11975 FlyBase G41230.1 TTGTTGCGAACGCCTTTGATGCATCTATACAATTATATATCTCCATGGAAATGTGTTATACAATATTACTTATAAGCATGCTTTAAAAT 18 8994691 0.986130611 12 17 139 0.913043478 1.322219295 0.043478261 0.222222222 0.391304348 18 2 0 21 3R:8994646-8994734 6 CG11975 FBtr0336753|FBtr0081960 8994632|8994632 8995212|8994839 TGTGTT 6mer3-8 dme-miR-317-3p 3R + 8994644 8994734 3'utr CG11975 FlyBase G31102.1 GATTGTTGCGAACGCCTTTGATGCATCTATACAATTATATATCTCCATGGAAATGTGTTATACAATATTACTTATAAGCATGCTTTAAAAT 23 8994691 0.981841361 9 23 168 1 1.462397998 0.103448276 0.217391304 0.379310345 23 0 0 29 3R:8994644-8994734 6 7 4818 FBgn0037648 137.6666667 11.18666667 17.04333333 0.050847458 0.625744934 0.410717778 6 6 6 0.01 dme-miR-283-5p 7mer-m1 GATATTT 3R 8994788 8994794 + 3R_8994788_8994794_+ 0.765586663 0.765586663 0.765586663 0 CG11975 FBtr0081960|FBtr0336753 8994632|8994632 8994839|8995212 3R + 8994759 8994801 3'utr CG11975 FlyBase G41231.1 ATGTAGTTATACCTTGAGACATGATTGTGGATATTTTATATTT 34 8994783 0.736873264 5 33 260 0.943396226 1.096910013 0.113207547 0.411764706 0.622641509 34 0 3 50 3R:8994759-8994801 7 CG11975 FBtr0336753|FBtr0081960 8994632|8994632 8995212|8994839 GATATTT 7mer-m1 dme-miR-283-5p 3R + 8994743 8994804 3'utr CG11975 FlyBase G31103.1 AGTCGAGTTCACATAAATGTAGTTATACCTTGAGACATGATTGTGGATATTTTATATTTTAT 27 8994783 0.984699561 5 27 218 1 1.556302501 0.055555556 0.259259259 0.444444444 27 0 0 36 3R:8994743-8994804 7 22.5 4819 FBgn0037648 137.6666667 11.18666667 17.04333333 0.163438257 2.011323004 1.320164287 5 5 5 0.01 dme-miR-283-5p 7mer-m8 TGATATT 3R 9007898 9007904 + 3R_9007898_9007904_+ 0.620203677 0.620203677 0.620203677 0 CG11982 FBtr0081965 9007855 9008030 3R + 9007874 9007933 3'utr CG11982 FlyBase G41249.1 AATCGAAGTGGAGCGATGATCGATTGATATTCAAAATTAAGCCAAATATTGGCCGCATAT 24 9007897 0.981757562 5 23 166 0.965517241 1.447158031 0.034482759 0.166666667 0.310344828 24 1 0 28 3R:9007874-9007933 7 CG11982 FBtr0081965 9007855 9008030 TGATATT 7mer-m8 dme-miR-283-5p 3R + 9007872 9007912 3'utr CG11982 FlyBase G31115.1 TAAATCGAAGTGGAGCGATGATCGATTGATATTCAAAATTA 13 9007897 0.776921424 3 13 102 1 1.361727836 0 0.461538462 0.695652174 13 0 0 23 3R:9007872-9007912 7 16.5 4820 FBgn0037653 203.22 15.85333333 24.31666667 0.081192796 1.04079058 0.67854695 1 1 1 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 3R 9010334 9010339 - 3R_9010334_9010339_- 1 1 1 0 CG11984 FBtr0300743|FBtr0300747|FBtr0300748|FBtr0300745|FBtr0300746|FBtr0300744 9010280|9010280|9010280|9010280|9010280|9010280 9010672|9010672|9010672|9010672|9010672|9010672 3R - 9010289 9010352 3'utr CG11984 FlyBase G49192.1 AAAGATGAGGAAGATGTGCAGCAAGAAAAATTATTGTAATCATTGAATTAATTATAATTTAAAG 15 9010338 0.839128936 5 13 60 0.875 0.84509804 0.4375 0.066666667 0.125 15 1 1 14 3R:9010289-9010352 6 CG11984 FBtr0300745|FBtr0300748|FBtr0300747|FBtr0300743|FBtr0300744|FBtr0300746 9010280|9010280|9010280|9010280|9010280|9010280 9010672|9010672|9010672|9010672|9010672|9010672 ATGTGC 6mer3-8 dme-miR-305-3p 3R - 9010286 9010358 3'utr CG11984 FlyBase G37138.1 TTATAAAAAGATGAGGAAGATGTGCAGCAAGAAAAATTATTGTAATCATTGAATTAATTATAATTTAAAGAAA 18 9010338 0.925047782 4 18 69 1 1.431363764 0.407407407 0.388888889 0.592592593 18 0 0 27 3R:9010286-9010358 6 13 4821 FBgn0037655 1188.326667 58.71666667 90.07 0.010939753 0.221402214 0.144332186 -1 -1 -1 0.01 dme-miR-965-3p 6mer2-7 ACGCTT 3R 9017195 9017200 - 3R_9017195_9017200_- 1 1 1 0 tgo FBtr0082005 9016771 9017753 3R - 9017184 9017226 3'utr tgo FlyBase G49212.1 AGCAACTCAGCAAGTGTACCACTTCCACGCTTTTCCCGCGAAC 10 9017194 0.707454545 2 10 59 1 1.079181246 0 0.2 0.333333333 10 0 0 12 3R:9017184-9017226 6 tgo FBtr0082005 9016771 9017753 ACGCTT 6mer2-7 dme-miR-965-3p 3R - 9017186 9017239 3'utr tgo FlyBase G37153.1 ATTGATAGTTGTAAGCAACTCAGCAAGTGTACCACTTCCACGCTTTTCCCGCGA 5 9017220 0.948781538 4 5 26 1 1 0.3 0.6 0.8 5 0 0 10 3R:9017186-9017239 6 6 4822 FBgn0264075 208 8.796666667 13.4 0.028846154 0.682076544 0.447761194 -6 20 7 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 9017469 9017474 - 3R_9017469_9017474_- 1 1 1 0 tgo FBtr0082005|FBtr0336755 9016771|9017245 9017753|9017753 3R - 9017459 9017494 3'utr tgo FlyBase G49214.1 ACTTAACCCGCTCATTGGCCGTGCAAAAGTATTTAC 49 9017479 0.746130073 2 47 205 0.967213115 1.770852012 0 0.183673469 0.344262295 49 2 0 59 3R:9017459-9017494 6 tgo FBtr0082005|FBtr0336755 9016771|9017245 9017753|9017753 GTGCAA 6mer3-8 dme-miR-92b-3p 3R - 9017434 9017494 3'utr tgo FlyBase G37155.1 ACTTAACCCGCTCATTGGCCGTGCAAAAGTATTTACAATTAAGGCCTTACGATTGTTCGTA 28 9017479 0.94739277 3 28 122 1 1.612783857 0.097560976 0.357142857 0.56097561 28 0 0 41 3R:9017434-9017494 6 37.5 4823 FBgn0264075 208 8.796666667 13.4 0.180288462 4.262978401 2.798507463 5 5 5 0.01 dme-miR-277-3p 6mer2-7 GCATTT 3R 9017604 9017609 - 3R_9017604_9017609_- 0.587209577 1 0.793604788 0.291886891 tgo FBtr0082005|FBtr0336755 9016771|9017245 9017753|9017753 3R - 9017581 9017643 3'utr tgo FlyBase G49216.1 AGCCAAACGCATGCAAATTGTAATCTCGTAAATAGCATTTTAAGTACATAGGGGTAGTCACGT 29 9017625 0.804518219 7 25 229 0.878787879 1.462397998 0.272727273 0.137931034 0.242424242 29 4 0 29 3R:9017581-9017643 6 tgo FBtr0082005|FBtr0336755 9016771|9017245 9017753|9017753 GCATTT 6mer2-7 dme-miR-277-3p 3R - 9017598 9017643 3'utr tgo FlyBase G37156.1 AGCCAAACGCATGCAAATTGTAATCTCGTAAATAGCATTTTAAGTA 18 9017625 0.941528376 8 14 118 0.892857143 1.397940009 0.428571429 0.333333333 0.571428571 18 3 0 25 3R:9017598-9017643 6 18.5 4824 FBgn0264075 208 8.796666667 13.4 0.088942308 2.103069344 1.380597015 16 16 16 0.01 dme-miR-7-5p 6mer2-7 TCTTCC 3R 9017720 9017725 - 3R_9017720_9017725_- 1 1 1 0 tgo FBtr0082005|FBtr0336755 9016771|9017245 9017753|9017753 3R - 9017665 9017743 3'utr tgo FlyBase G49217.1 ATTTCTTTCGATTCCCACTCTTCCCCCGTCCCGCAACTTAATCTGTGTCTCTCTTAACCACTTCTCAAGTGCAATCCAT 12 9017723 0.981112032 7 12 89 1 1.146128036 0.142857143 0.166666667 0.285714286 12 0 0 14 3R:9017665-9017743 6 tgo FBtr0082005|FBtr0336755 9016771|9017245 9017753|9017753 TCTTCC 6mer2-7 dme-miR-7-5p 3R - 9017688 9017741 3'utr tgo FlyBase G37157.1 TTCTTTCGATTCCCACTCTTCCCCCGTCCCGCAACTTAATCTGTGTCTCTCTTA 8 9017732 0.983815836 4 7 64 0.9 0.954242509 0.2 0.25 0.4 8 1 0 9 3R:9017688-9017741 6 7.5 4825 FBgn0264075 208 8.796666667 13.4 0.036057692 0.85259568 0.559701493 -2 7 2.5 0.01 dme-miR-33-5p 6mer3-8 CAATGC 3R 9020385 9020390 - 3R_9020385_9020390_- 1 1 1 0 neur FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002 9020346|9020346|9020346|9020346 9021792|9021792|9021792|9021792 3R - 9020367 9020408 3'utr neur FlyBase G49224.1 GATATATGTAAGAAAACGCAATGCTGTAATACCATTAAATAC 26 9020387 0.964396529 2 24 108 0.935483871 1.462397998 0.129032258 0.153846154 0.290322581 26 2 0 29 3R:9020367-9020408 6 neur FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002 9020346|9020346|9020346|9020346 9021792|9021792|9021792|9021792 CAATGC 6mer3-8 dme-miR-33-5p 3R - 9020365 9020399 3'utr neur FlyBase G37161.1 AAGAAAACGCAATGCTGTAATACCATTAAATACTG 23 9020387 0.971257676 2 22 97 0.918918919 1.531478917 0.135135135 0.434782609 0.648648649 23 3 0 34 3R:9020365-9020399 6 24.5 4826 FBgn0002932 466.07 14.63 22.51666667 0.052567211 1.674641148 1.088082902 -3 -3 -3 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3R 9020794 9020799 - 3R_9020794_9020799_- 1 1 1 0 neur FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002|FBtr0300414 9020346|9020346|9020346|9020346|9020721 9021792|9021792|9021792|9021792|9021792 3R - 9020742 9020812 3'utr neur FlyBase G49226.1 AAACATAGAACAAAAGACTTGTATGTTGTACCAACAGCTTGAATGAAATATGGAAAATGGAATGCCCATCT 39 9020791 0.977938856 6 32 208 0.822222222 1.091080469 0.022222222 0.128205128 0.244444444 39 6 2 37 3R:9020742-9020812 6 neur FBtr0300414|FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002 9020721|9020346|9020346|9020346|9020346 9021792|9021792|9021792|9021792|9021792 AAGACT 6mer3-8 dme-miR-14-3p 3R - 9020744 9020837 3'utr neur FlyBase G37162.1 TGGAGACTTAAATATATTTAACTATAAACATAGAACAAAAGACTTGTATGTTGTACCAACAGCTTGAATGAAATATGGAAAATGGAATGCCCAT 30 9020791 0.969805414 10 29 156 0.973684211 1.568201724 0.026315789 0.2 0.368421053 30 1 0 37 3R:9020744-9020837 6 31 4827 FBgn0002932 466.07 14.63 22.51666667 0.066513614 2.118933698 1.376757957 -8 -8 -8 0.01 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 9020972 9020979 - 3R_9020972_9020979_- 0.63113665 0.63113665 0.63113665 0 neur FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002|FBtr0300414 9020346|9020346|9020346|9020346|9020721 9021792|9021792|9021792|9021792|9021792 3R - 9020954 9021023 3'utr neur FlyBase G49227.1 GTTTAAAGTTAATATTAGTCTAGCCCTAAGTACTTAAGTTAATTTCTAGTCAACGAATTATGCTGAAGTT 100 9020980 0.98176363 8 93 688 0.936507937 1.594760753 0.03968254 0.18 0.349206349 100 6 2 118 3R:9020954-9021023 8 neur FBtr0300414|FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002 9020721|9020346|9020346|9020346|9020346 9021792|9021792|9021792|9021792|9021792 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R - 9020953 9020989 3'utr neur FlyBase G37163.1 TAAGTTAATTTCTAGTCAACGAATTATGCTGAAGTTA 95 9020980 0.80044952 4 93 619 0.973509934 2.167317335 0.039735099 0.410526316 0.629139073 95 4 0 147 3R:9020953-9020989 8 95.5 4828 FBgn0002932 466.07 14.63 22.51666667 0.204904843 6.527682843 4.241302739 1 1 1 0.01 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 3R 9021265 9021272 - 3R_9021265_9021272_- 0.625364009 0.625364009 0.625364009 0 neur FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002|FBtr0300414 9020346|9020346|9020346|9020346|9020721 9021792|9021792|9021792|9021792|9021792 3R - 9021251 9021291 3'utr neur FlyBase G49229.1 ATTTGGCGATTAATCATTTTGGTGCTAAATGTTTTGAAAGG 37 9021273 0.723439899 5 37 361 1 1.681241237 0.270833333 0.243243243 0.416666667 37 0 0 48 3R:9021251-9021291 8 neur FBtr0300414|FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002 9020721|9020346|9020346|9020346|9020346 9021792|9021792|9021792|9021792|9021792 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 3R - 9021250 9021290 3'utr neur FlyBase G37164.1 TTTGGCGATTAATCATTTTGGTGCTAAATGTTTTGAAAGGC 31 9021273 0.725945473 2 31 290 1 1.662757832 0.347826087 0.322580645 0.543478261 31 0 0 46 3R:9021250-9021290 8 34 4829 FBgn0002932 466.07 14.63 22.51666667 0.072950415 2.323991798 1.509992598 1 1 1 0.01 dme-miR-11-3p 7mer-m1 TGTGATG 3R 9021555 9021561 - 3R_9021555_9021561_- 0.612071121 0.612071121 0.612071121 0 neur FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002|FBtr0300414 9020346|9020346|9020346|9020346|9020721 9021792|9021792|9021792|9021792|9021792 3R - 9021504 9021579 3'utr neur FlyBase G49230.1 ACGTATGTTTAATTTTTTTGTGATGTTATAAGTAAGTGCGCCCCAGAGCCAAAACTATGTATTGTTCAATCCAACA 26 9021562 0.804586544 7 22 304 0.866666667 1.113943352 0.233333333 0.115384615 0.233333333 26 3 1 26 3R:9021504-9021579 7 neur FBtr0300414|FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002 9020721|9020346|9020346|9020346|9020346 9021792|9021792|9021792|9021792|9021792 TGTGATG 7mer-m1 dme-miR-11-3p 3R - 9021503 9021611 3'utr neur FlyBase G37165.1 TTAGTGTATGAAACTATCAACTAATTTATCACACGTATGTTTAATTTTTTTGTGATGTTATAAGTAAGTGCGCCCCAGAGCCAAAACTATGTATTGTTCAATCCAACAA 24 9021563 0.993717466 12 22 268 0.925 1.267171728 0.2 0.5 0.7 24 2 1 37 3R:9021503-9021611 7 20 4830 FBgn0002932 466.07 14.63 22.51666667 0.042912009 1.367053999 0.88823094 1 2 1.5 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 3R 9021699 9021705 - 3R_9021699_9021705_- 0.620204266 0.620204266 0.620204266 0 neur FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002|FBtr0300414 9020346|9020346|9020346|9020346|9020721 9021792|9021792|9021792|9021792|9021792 3R - 9021610 9021741 3'utr neur FlyBase G49231.1 ACTAAAGCTACACATTATACCATACACACAAGTTGTTGCATTTTAAACGCAATTGAGCGCAAAGAATATTATATTGGAGAGATAGGCATTATTTTTGCAGACTAAAGATTAGATAGTTTACGCAGCTAGATT 44 9021706 0.98229069 15 39 294 0.903846154 1.672097858 0.038461538 0.159090909 0.288461538 44 5 0 47 3R:9021610-9021741 7 neur FBtr0300414|FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002 9020721|9020346|9020346|9020346|9020346 9021792|9021792|9021792|9021792|9021792 TGCATTT 7mer-m8 dme-miR-277-3p 3R - 9021623 9021720 3'utr neur FlyBase G37166.1 ATACACACAAGTTGTTGCATTTTAAACGCAATTGAGCGCAAAGAATATTATATTGGAGAGATAGGCATTATTTTTGCAGACTAAAGATTAGATAGTTT 23 9021706 0.828580018 12 22 143 0.964285714 1.130333768 0.071428571 0.217391304 0.357142857 23 0 1 27 3R:9021623-9021720 7 11 4831 FBgn0002932 466.07 14.63 22.51666667 0.023601605 0.751879699 0.488527017 1 1 1 0.01 dme-miR-317-5p 6mer3-8 GTATCC 3R 9042309 9042314 + 3R_9042309_9042314_+ 1 1 1 0 hyx FBtr0300415|FBtr0081968 9041940|9041940 9042349|9042349 3R + 9042287 9042344 3'utr hyx FlyBase G41258.2 AAACACAAACATCTGAGAGCAAGTATCCTTTGTATTTTTAGTGATAATAAACAGTTAA 16 9042318 0.859263488 8 15 134 0.952380952 1 0.095238095 0.1875 0.380952381 16 0 1 20 3R:9042287-9042344 6 hyx FBtr0300415|FBtr0081968 9041940|9041940 9042349|9042349 GTATCC 6mer3-8 dme-miR-317-5p 3R + 9042291 9042330 3'utr hyx FlyBase G31123.1 ACAAACATCTGAGAGCAAGTATCCTTTGTATTTTTAGTGA 9 9042316 0.70232995 4 9 74 1 1.230448921 0 0.555555556 0.764705882 9 0 0 17 3R:9042291-9042330 6 9.5 4832 FBgn0037657 511.6666667 27.83666667 42.89666667 0.018566775 0.341276494 0.221462429 -9 -7 -8 0.01 dme-miR-8-3p 6mer2-7 AGTATT 3R 9042611 9042616 - 3R_9042611_9042616_- 1 1 1 0 Nmdmc FBtr0081997|FBtr0336761|FBtr0081996 9042506|9042506|9042506 9042656|9042656|9042656 3R - 9042564 9042638 3'utr Nmdmc FlyBase G49239.1 CGTGCTTCGCTGGCCGAGAAATAGTATTTTTATTTAATCCCCTAAACCTATATTAGATAGTAAAGTTACTGACCA 8 9042610 0.98375913 5 8 66 1 1 0.2 0.25 0.4 8 0 0 10 3R:9042564-9042638 6 Nmdmc FBtr0081996|FBtr0336761|FBtr0081997 9042506|9042506|9042506 9042656|9042656|9042656 AGTATT 6mer2-7 dme-miR-8-3p 3R - 9042595 9042637 3'utr Nmdmc FlyBase G37173.1 GTGCTTCGCTGGCCGAGAAATAGTATTTTTATTTAATCCCCTA 6 9042616 0.900174903 3 6 59 1 1.113943352 0.692307692 0.333333333 0.692307692 6 0 0 13 3R:9042595-9042637 6 5.5 4833 FBgn0010222 307.6666667 32.58333333 49.87 0.01787649 0.168797954 0.110286746 -6 0 -3 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 9062211 9062217 + 3R_9062211_9062217_+ 0.658999527 0.658999527 0.658999527 0 Kdm2 FBtr0300691|FBtr0336760|FBtr0336759|FBtr0336758 9062203|9062203|9062203|9062203 9063245|9063245|9063245|9063245 3R + 9062184 9062232 stop_codon Kdm2 FlyBase G41288.1 CGAAGCTGGCACCACGACTGAGCCACTGGCAGCTGGAGGAGGGCCAATA 43 9062210 0.94716337 3 42 82 0.98 1.389166084 0.32 0.162790698 0.28 43 0 1 49 3R:9062184-9062232 7 Kdm2 FBtr0300691|FBtr0336760|FBtr0336759|FBtr0336758 9062203|9062203|9062203|9062203 9063245|9063245|9063245|9063245 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 9062186 9062244 stop_codon Kdm2 FlyBase G31153.1 AAGCTGGCACCACGACTGAGCCACTGGCAGCTGGAGGAGGGCCAATACATCTTAATCAT 20 9062210 0.836495522 5 19 46 0.964285714 1.431363764 0.178571429 0.3 0.5 20 1 0 27 3R:9062186-9062244 7 27.5 4834 FBgn0037659 729.05 16.58333333 25.47333333 0.037720321 1.658291457 1.079560325 1 1 1 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3R 9062375 9062381 + 3R_9062375_9062381_+ 0.823349562 0.823349562 0.823349562 0 Kdm2 FBtr0300691|FBtr0336760|FBtr0336759|FBtr0336758 9062203|9062203|9062203|9062203 9063245|9063245|9063245|9063245 3R + 9062235 9062392 3'utr Kdm2 FlyBase G41289.1 TCTTAATCATATGCATTAAGACACCAAACTTTCTAAGCCCCAATCCAGTACCATGTACTCCGAATCCCTCGCCGGAATGCAAGCCAAAGAGTGTCGTCGGGCCCTTTGCATTGCGTGTGGTTATATTCTTAAATGCTAAGCTAGTCAGGATAGGGCTC 34 9062371 0.975682334 12 31 197 0.918918919 1.531478917 0.135135135 0.088235294 0.162162162 34 3 0 34 3R:9062235-9062392 7 Kdm2 FBtr0300691|FBtr0336760|FBtr0336759|FBtr0336758 9062203|9062203|9062203|9062203 9063245|9063245|9063245|9063245 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 9062287 9062445 3'utr Kdm2 FlyBase G31154.1 ATGTACTCCGAATCCCTCGCCGGAATGCAAGCCAAAGAGTGTCGTCGGGCCCTTTGCATTGCGTGTGGTTATATTCTTAAATGCTAAGCTAGTCAGGATAGGGCTCAGGTCATATTCAGGTTCAGGTCTGTTTTTCCGATACCTTTTGAGAATCTCAAA 27 9062371 0.88351406 14 23 190 0.860465116 1.568201724 0.069767442 0.333333333 0.581395349 27 6 0 37 3R:9062287-9062445 7 11.5 4835 FBgn0037659 729.05 16.58333333 25.47333333 0.015773952 0.693467337 0.451452499 4 4 4 0.01 dme-miR-1007-3p 7mer-m8 TGAGCTT 3R 9062634 9062640 + 3R_9062634_9062640_+ 0.620203442 0.620203442 0.620203442 0 Kdm2 FBtr0300691|FBtr0336760|FBtr0336759|FBtr0336758 9062203|9062203|9062203|9062203 9063245|9063245|9063245|9063245 3R + 9062569 9062914 3'utr Kdm2 FlyBase G41290.1 CTATTTAATCATTTCCGGCTTTGTTTTCCCCATTTCCTCAAACCACTCTTGGCAGTGTAAAGGGCTGAGCTTCGGTTTTCCGAAGCTGAAAGATACAAACTTTACCGATACCCATTTTATACAAGTCGCCCCACCATCCTCACACTCGGACTTAGCGTAGTGATTAAGAATAGCATTCCCGCGAAGGTAATTACATTTAATCAGTGTCATATTTCTAAGCATGCAGGAAACGTTACATGTTAGAGAGCAGCACTAGGTGCACCCATCCAGCTTAAGTAGATGCAGCTCGCACACCAACTGAGAATCACAAGCAGTGCGTTTCGGGACTGTAAGAGCAATGCAATGC 51 9062635 0.981077615 27 41 277 0.810344828 1.672097858 0.344827586 0.117647059 0.224137931 51 11 0 47 3R:9062569-9062914 7 Kdm2 FBtr0300691|FBtr0336760|FBtr0336759|FBtr0336758 9062203|9062203|9062203|9062203 9063245|9063245|9063245|9063245 TGAGCTT 7mer-m8 dme-miR-1007-3p 3R + 9062574 9062654 3'utr Kdm2 FlyBase G31155.1 TAATCATTTCCGGCTTTGTTTTCCCCATTTCCTCAAACCACTCTTGGCAGTGTAAAGGGCTGAGCTTCGGTTTTCCGAAGC 7 9062634 0.977620364 7 7 48 1 1 0.3 0.428571429 0.6 7 0 0 10 3R:9062574-9062654 7 4.5 4836 FBgn0037659 729.05 16.58333333 25.47333333 0.006172416 0.271356784 0.176655326 -1 0 -0.5 0.01 dme-miR-278-3p 6mer3-8 CCCACC 3R 9062698 9062703 + 3R_9062698_9062703_+ 1 1 1 0 Kdm2 FBtr0300691|FBtr0336760|FBtr0336759|FBtr0336758 9062203|9062203|9062203|9062203 9063245|9063245|9063245|9063245 3R + 9062569 9062914 3'utr Kdm2 FlyBase G41290.1 CTATTTAATCATTTCCGGCTTTGTTTTCCCCATTTCCTCAAACCACTCTTGGCAGTGTAAAGGGCTGAGCTTCGGTTTTCCGAAGCTGAAAGATACAAACTTTACCGATACCCATTTTATACAAGTCGCCCCACCATCCTCACACTCGGACTTAGCGTAGTGATTAAGAATAGCATTCCCGCGAAGGTAATTACATTTAATCAGTGTCATATTTCTAAGCATGCAGGAAACGTTACATGTTAGAGAGCAGCACTAGGTGCACCCATCCAGCTTAAGTAGATGCAGCTCGCACACCAACTGAGAATCACAAGCAGTGCGTTTCGGGACTGTAAGAGCAATGCAATGC 51 9062670 0.981077615 27 41 277 0.810344828 1.672097858 0.344827586 0.117647059 0.224137931 51 11 0 47 3R:9062569-9062914 6 Kdm2 FBtr0300691|FBtr0336760|FBtr0336759|FBtr0336758 9062203|9062203|9062203|9062203 9063245|9063245|9063245|9063245 CCCACC 6mer3-8 dme-miR-278-3p 3R + 9062657 9062757 3'utr Kdm2 FlyBase G31156.1 AAAGATACAAACTTTACCGATACCCATTTTATACAAGTCGCCCCACCATCCTCACACTCGGACTTAGCGTAGTGATTAAGAATAGCATTCCCGCGAAGGTA 18 9062670 0.963134975 10 16 87 0.928571429 1.113943352 0.071428571 0.444444444 0.642857143 18 1 1 26 3R:9062657-9062757 6 3.5 4837 FBgn0037659 729.05 16.58333333 25.47333333 0.004800768 0.211055276 0.137398587 28 28 28 0.01 dme-miR-277-3p 6mer3-8 TGCATT 3R 9067663 9067668 - 3R_9067663_9067668_- 0.999999999 0.999999999 0.999999999 0 pum FBtr0081993|FBtr0333668|FBtr0333667 9067576|9066341|9066341 9070944|9070944|9070944 3R - 9067649 9067767 3'utr pum FlyBase G49273.1 CACAGAGCGAGACCTTTAGTTTTGTAAACCGCGAGCGATTGGCACAAGTTAAATAACTACAATTTGGACAGCATTGCATTCGAGCATTTGATTTAACAATGCATTAGATTTTTATGTTT 44 9067664 0.978270228 14 43 330 0.980392157 1.698970004 0.333333333 0.159090909 0.274509804 44 1 0 50 3R:9067649-9067767 6 pum FBtr0333667|FBtr0333668|FBtr0081993 9066341|9066341|9067576 9070944|9070944|9070944 TGCATT 6mer3-8 dme-miR-277-3p 3R - 9067649 9067773 3'utr pum FlyBase G37211.1 TACAAACACAGAGCGAGACCTTTAGTTTTGTAAACCGCGAGCGATTGGCACAAGTTAAATAACTACAATTTGGACAGCATTGCATTCGAGCATTTGATTTAACAATGCATTAGATTTTTATGTTT 46 9067664 0.981035516 14 43 315 0.953125 1.785329835 0.125 0.347826087 0.53125 46 3 0 61 3R:9067649-9067773 6 23 4838 FBgn0003165 2989.103333 65.03333333 99.94333333 0.007694615 0.353664787 0.230130407 -4 -4 -4 0.01 dme-miR-184-5p 6mer3-8 TGATAA 3R 9068878 9068883 - 3R_9068878_9068883_- 0.99999998 0.999999961 0.999999971 0 pum FBtr0081993|FBtr0333668|FBtr0333667 9067576|9066341|9066341 9070944|9070944|9070944 3R - 9068869 9068943 3'utr pum FlyBase G49275.2 ATTTGTTTGGTACTTTTAGTTATTAACTTGTCAACTGCCTGTCTCTAGAGCGCAATGCACTGATAATTTTAATTT 46 9068904 0.759314812 11 39 380 0.86 1.33243846 0.14 0.086956522 0.16 46 6 1 43 3R:9068869-9068943 6 pum FBtr0333667|FBtr0333668|FBtr0081993 9066341|9066341|9067576 9070944|9070944|9070944 TGATAA 6mer3-8 dme-miR-184-5p 3R - 9068868 9068935 3'utr pum FlyBase G37214.1 GGTACTTTTAGTTATTAACTTGTCAACTGCCTGTCTCTAGAGCGCAATGCACTGATAATTTTAATTTA 28 9068888 0.837034004 12 27 234 0.977777778 1.643452676 0.311111111 0.357142857 0.6 28 1 0 44 3R:9068868-9068935 6 20.5 4839 FBgn0003165 2989.103333 65.03333333 99.94333333 0.006858244 0.315222963 0.205116233 21 5 13 0.01 dme-miR-1006-3p 8mer-A1 CGAATTTA 3R 9069318 9069325 - 3R_9069318_9069325_- 0.671697512 0.671697512 0.671697512 0 pum FBtr0081993|FBtr0333668|FBtr0333667 9067576|9066341|9066341 9070944|9070944|9070944 3R - 9069292 9069416 3'utr pum FlyBase G49277.1 CATTTTTGATATAAATTTAGATTACTTCGCGACGCCTTATTCCAAATACTAAAATACTGAAAATAATGAAAACGAGAGATGGTAAGAAAATCGAATTTAGACTTTTTTGTCGGTTTCGTCGAAAC 27 9069325 0.908371165 9 24 200 0.931034483 1.431363764 0.413793103 0.074074074 0.137931034 27 2 0 27 3R:9069292-9069416 8 pum FBtr0333667|FBtr0333668|FBtr0081993 9066341|9066341|9067576 9070944|9070944|9070944 CGAATTTA 8mer-A1 dme-miR-1006-3p 3R - 9069306 9069337 3'utr pum FlyBase G37215.1 TGGTAAGAAAATCGAATTTAGACTTTTTTGTC 7 9069326 0.970650807 3 6 53 0.857142857 0.77815125 0.285714286 0 0 7 1 0 6 3R:9069306-9069337 8 9 4840 FBgn0003165 2989.103333 65.03333333 99.94333333 0.003010936 0.138390569 0.090051029 0 1 0.5 0.01 dme-miR-12-5p 6mer3-8 AATACT 3R 9069367 9069372 - 3R_9069367_9069372_- 1 1 1 0 pum FBtr0081993|FBtr0333668|FBtr0333667 9067576|9066341|9066341 9070944|9070944|9070944 3R - 9069292 9069416 3'utr pum FlyBase G49277.1 CATTTTTGATATAAATTTAGATTACTTCGCGACGCCTTATTCCAAATACTAAAATACTGAAAATAATGAAAACGAGAGATGGTAAGAAAATCGAATTTAGACTTTTTTGTCGGTTTCGTCGAAAC 27 9069377 0.908371165 9 24 200 0.931034483 1.431363764 0.413793103 0.074074074 0.137931034 27 2 0 27 3R:9069292-9069416 6 pum FBtr0333667|FBtr0333668|FBtr0081993 9066341|9066341|9067576 9070944|9070944|9070944 AATACT 6mer3-8 dme-miR-12-5p 3R - 9069353 9069389 3'utr pum FlyBase G37216.1 CGCGACGCCTTATTCCAAATACTAAAATACTGAAAAT 9 9069378 0.963352404 2 9 48 1 1.041392685 0.363636364 0.222222222 0.363636364 9 0 0 11 3R:9069353-9069389 6 9.5 4841 FBgn0003165 2989.103333 65.03333333 99.94333333 0.003178211 0.146078934 0.095053864 5 6 5.5 0.01 dme-miR-2b-2-5p 6mer2-7 TGAAGA 3R 9070370 9070375 - 3R_9070370_9070375_- 1 1 1 0 pum FBtr0081993|FBtr0305197|FBtr0333668|FBtr0081994|FBtr0081990|FBtr0081992|FBtr0333667|FBtr0081991 9067576|9069755|9066341|9069755|9069755|9069755|9066341|9069755 9070944|9070944|9070944|9070944|9070944|9070944|9070944|9070944 3R - 9070369 9070442 3'utr pum FlyBase G49281.1 AATTATTATATAGCAAGTCTATCTGTAAATGATTAATGTTTCGACTGTAAATTAATAAGAAGACAACTGAAGAG 10 9070403 0.98930707 7 9 86 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 3R:9070369-9070442 6 pum FBtr0333667|FBtr0081991|FBtr0081990|FBtr0081992|FBtr0333668|FBtr0081994|FBtr0081993|FBtr0305197 9066341|9069755|9069755|9069755|9066341|9069755|9067576|9069755 9070944|9070944|9070944|9070944|9070944|9070944|9070944|9070944 TGAAGA 6mer2-7 dme-miR-2b-2-5p 3R - 9070358 9070416 3'utr pum FlyBase G37220.1 AAATGATTAATGTTTCGACTGTAAATTAATAAGAAGACAACTGAAGAGCCGGCGAGCTG 10 9070395 0.972702496 6 10 49 1 1.322219295 0.19047619 0.7 0.857142857 10 0 0 21 3R:9070358-9070416 6 2.5 4842 FBgn0003165 2989.103333 65.03333333 99.94333333 0.000836371 0.038441825 0.025014175 28 20 24 0.01 dme-miR-1002-5p 6mer3-8 CTACTT 3R 9238376 9238381 - 3R_9238376_9238381_- 0.999999726 0.999999821 0.999999774 7.07E-08 D1 FBtr0081988|FBtr0301524|FBtr0081987 9238081|9238081|9238081 9238518|9238518|9238518 3R - 9238342 9238411 3'utr D1 FlyBase G49317.1 AAGAGAAGAAAACACAAAAATGGATAGGACCTACTTGGACTTTAGAGAACCTTCCCCTCCTAAAACAACA 45 9238376 0.968541191 8 44 246 1 1.69019608 0.224489796 0.088888889 0.163265306 45 0 0 49 3R:9238342-9238411 6 D1 FBtr0081987|FBtr0081988|FBtr0301524 9238081|9238081|9238081 9238518|9238518|9238518 CTACTT 6mer3-8 dme-miR-1002-5p 3R - 9238296 9238393 3'utr D1 FlyBase G37248.1 AATGGATAGGACCTACTTGGACTTTAGAGAACCTTCCCCTCCTAAAACAACACACTTTGTCTACATATATATTCCGATTTATTGCTGAGAAATCGGAC 24 9238376 0.825429496 9 24 145 1 1.491361694 0.193548387 0.291666667 0.451612903 24 0 0 31 3R:9238296-9238393 6 25 4843 FBgn0000412 3413.53 239.6433333 366.14 0.007323797 0.1043217 0.068279893 -5 -5 -5 0.01 dme-miR-965-3p 7mer-m8 TACGCTT 3R 9262231 9262237 + 3R_9262231_9262237_+ 0.620204855 0.620204855 0.620204855 0 VhaM8.9 FBtr0081978 9262171 9262590 3R + 9262202 9262590 3'utr VhaM8.9 FlyBase G41311.1 GGAGCAGGAGGAGCGAGAGGAGCTTGCGTTACGCTTTGTTATTTCGTCCCCCTTTTAAGTTGAAATTTGCCAACTTCTACTTCAATCCAACAGCGGATAAATTGTGTGTTTGTGTGTGTGCGGACAGCTGTCGCAGTAGTTGGTTTTATTATCTATAAATAAGTATTAAAAAACTTTTCAGTTTTCAATGCAGTTGCGGGCGTCGCAACAATTCCATAGAAATTTGTTACATTTTCCTGTTTTGTTGTACTTTTTAGGTTTATATATATATACGAATATGCACAACATACTCGCCAAGTCAGTCAGTTCTTCAAACGATTCATCATATGTAAATTATCAAAATGTGAAGTGTTGAAAAGTAAAGTTAAATATATATAGCCTAAAAAGAC 245 9262243 0.986978018 54 234 2045 0.954063604 1.954242509 0.130742049 0.126530612 0.243816254 245 11 2 270 3R:9262202-9262590 7 VhaM8.9 FBtr0081978 9262171 9262590 TACGCTT 7mer-m8 dme-miR-965-3p 3R + 9262203 9262537 3'utr VhaM8.9 FlyBase G31173.1 GAGCAGGAGGAGCGAGAGGAGCTTGCGTTACGCTTTGTTATTTCGTCCCCCTTTTAAGTTGAAATTTGCCAACTTCTACTTCAATCCAACAGCGGATAAATTGTGTGTTTGTGTGTGTGCGGACAGCTGTCGCAGTAGTTGGTTTTATTATCTATAAATAAGTATTAAAAAACTTTTCAGTTTTCAATGCAGTTGCGGGCGTCGCAACAATTCCATAGAAATTTGTTACATTTTCCTGTTTTGTTGTACTTTTTAGGTTTATATATATATACGAATATGCACAACATACTCGCCAAGTCAGTCAGTTCTTCAAACGATTCATCATATGTAAATTA 196 9262240 0.987083951 41 182 1597 0.942028986 2.414973348 0.09057971 0.31122449 0.510869565 196 16 0 260 3R:9262203-9262537 7 119 4844 FBgn0037671 995.7833333 82.36 125.1466667 0.119503908 1.444876153 0.950884296 -12 -9 -10.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 3R 9265153 9265158 - 3R_9265153_9265158_- 1 1 1 0 Aats-trp FBtr0081981 9265025 9265303 3R - 9265098 9265182 3'utr Aats-trp FlyBase G49330.1 TCTATGTAAATAGCTATACAGAATTGATCTATGCCTTGGCTCTGAGTCCGTGTGGCGCCCACTTAATGCATCGTTGTACTCGCTA 188 9265159 0.816930697 15 173 1501 0.92760181 1.834632606 0.045248869 0.14893617 0.2760181 188 14 2 205 3R:9265098-9265182 6 Aats-trp FBtr0081981 9265025 9265303 TGATCT 6mer3-8 dme-bantam-3p 3R - 9265097 9265182 3'utr Aats-trp FlyBase G37261.1 TCTATGTAAATAGCTATACAGAATTGATCTATGCCTTGGCTCTGAGTCCGTGTGGCGCCCACTTAATGCATCGTTGTACTCGCTAT 115 9265159 0.825906891 12 108 907 0.924731183 2.235528447 0.032258065 0.426086957 0.64516129 115 14 0 172 3R:9265097-9265182 6 139 4845 FBgn0010803 589.9133333 43.03333333 65.91666667 0.235627832 3.230054222 2.108723135 1 1 1 0.01 dme-miR-184-5p 6mer3-8 TGATAA 3R 9270178 9270183 + 3R_9270178_9270183_+ 0.999998412 0.999999999 0.999999206 1.13E-06 Vps16A FBtr0081979 9270087 9270224 3R + 9270179 9270223 3'utr Vps16A FlyBase G41321.1 GATAAAAGTAATTATGCTCGTAATAAATATAAATTATTTTGTAAA 41 9270193 0.782549929 2 40 350 0.976744186 1.62324929 0 0.048780488 0.093023256 41 1 0 42 3R:9270179-9270223 4 Vps16A FBtr0081979 9270087 9270224 TGATAA 6mer3-8 dme-miR-184-5p 3R + 9270166 9270215 3'utr Vps16A FlyBase G31179.1 AGGACGTGCTCTTGATAAAAGTAATTATGCTCGTAATAAATATAAATTAT 19 9270193 0.983004474 3 18 137 0.964285714 1.431363764 0.035714286 0.421052632 0.607142857 19 1 0 27 3R:9270166-9270215 6 13.5 4846 FBgn0261241 836.6666667 37.19333333 57.25666667 0.016135458 0.362968274 0.235780404 -15 -15 -15 0.01 dme-miR-184-3p 6mer2-7 CCGTCC 3R 9336935 9336940 + 3R_9336935_9336940_+ 1 1 1 0 CG8121 FBtr0082019|FBtr0082017|FBtr0082018 9336879|9336879|9336879 9337256|9337459|9337256 3R + 9336893 9336949 3'utr CG8121 FlyBase G41324.1 CCATCCATCTATGGGGCTCACAACGAAATTGCACAATCTAGACCGTCCGAATGCAGC 33 9336929 0.740431468 6 25 132 0.769230769 0.698970004 0.538461538 0.151515152 0.282051282 33 4 5 30 3R:9336893-9336949 6 CG8121 FBtr0082018|FBtr0082019|FBtr0082017 9336879|9336879|9336879 9337256|9337256|9337459 CCGTCC 6mer2-7 dme-miR-184-3p 3R + 9336893 9336949 3'utr CG8121 FlyBase G31182.1 CCATCCATCTATGGGGCTCACAACGAAATTGCACAATCTAGACCGTCCGAATGCAGC 37 9336930 0.691141085 6 29 143 0.770833333 0.723103684 0.4375 0.243243243 0.416666667 37 5 6 37 3R:9336893-9336949 6 27.5 4847 FBgn0037680 158.3566667 13.87333333 21.06666667 0.173658619 1.982220086 1.305379747 6 5 5.5 0.01 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 9337092 9337099 + 3R_9337092_9337099_+ 0.631136385 0.631136385 0.631136385 0 CG8121 FBtr0082019|FBtr0082017|FBtr0082018 9336879|9336879|9336879 9337256|9337459|9337256 3R + 9337060 9337123 3'utr CG8121 FlyBase G41326.1 CCGCGAATCAGCGTAATTAGTTGTAAGTCTATTCCGTCCAAACGCATATGTTTTTTGTATACTG 2080 9337091 0.771501834 9 2052 17253 0.987304274 2.367914739 0.185780787 0.118269231 0.223867964 2080 21 9 2333 3R:9337060-9337123 8 CG8121 FBtr0082018|FBtr0082019|FBtr0082017 9336879|9336879|9336879 9337256|9337256|9337459 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R + 9337063 9337146 3'utr CG8121 FlyBase G31184.1 CGAATCAGCGTAATTAGTTGTAAGTCTATTCCGTCCAAACGCATATGTTTTTTGTATACTGTTGAAGAATCGCTGTCTTTATGT 1227 9337091 0.793610762 11 1204 9760 0.984324324 2.260309946 0.165945946 0.380603097 0.589189189 1227 20 9 1821 3R:9337063-9337146 8 1650 4848 FBgn0037680 158.3566667 13.87333333 21.06666667 10.41951712 118.9332052 78.32278481 1 1 1 0.01 dme-miR-263a-5p 6mer3-8 GTGCCA 3R 9358416 9358421 + 3R_9358416_9358421_+ 0.999999427 0.996227447 0.998113437 0.002667207 CG45050 FBtr0344364|FBtr0344370|FBtr0344363|FBtr0344367|FBtr0344369|FBtr0344365|FBtr0344368|FBtr0344366 9358403|9358403|9358403|9358403|9358403|9358403|9358403|9358403 9359189|9359189|9362994|9362994|9359189|9362994|9359189|9362994 3R + 9358398 9358516 stop_codon CG45050 FlyBase G41342.2 GATTTGAATTTCGATATTGTGCCAGTAACAGTAACAGTAGCCGTAGAATGATAATAACCAACTACACATGATAAGAGTACATATATATATATATGCTGCGCTATAACAAGGAAAGCAAC 57 9358415 0.973300235 18 53 331 0.9375 1.77815125 0.1875 0.105263158 0.203125 57 4 0 60 3R:9358398-9358516 6 CG45050 FBtr0344367|FBtr0344363|FBtr0344370|FBtr0344364|FBtr0344366|FBtr0344368|FBtr0344365|FBtr0344369 9358403|9358403|9358403|9358403|9358403|9358403|9358403|9358403 9362994|9362994|9359189|9359189|9362994|9359189|9362994|9359189 GTGCCA 6mer3-8 dme-miR-263a-5p 3R + 9358394 9358516 stop_codon CG45050 FlyBase G31201.1 AAAAGATTTGAATTTCGATATTGTGCCAGTAACAGTAACAGTAGCCGTAGAATGATAATAACCAACTACACATGATAAGAGTACATATATATATATATGCTGCGCTATAACAAGGAAAGCAAC 33 9358414 0.970867391 13 31 182 0.944444444 1.707570176 0.222222222 0.484848485 0.685185185 33 3 0 51 3R:9358394-9358516 6 20.5 4849 FBgn0266410 13462.35667 672.7966667 1034.65 0.001522765 0.03046983 0.019813463 1 2 1.5 0.01 dme-miR-1007-3p 6mer3-8 TGAGCT 3R 9358929 9358934 + 3R_9358929_9358934_+ 1 1 1 0 CG45050 FBtr0344364|FBtr0344370|FBtr0344363|FBtr0344367|FBtr0344369|FBtr0344365|FBtr0344368|FBtr0344366 9358403|9358403|9358403|9358403|9358403|9358403|9358403|9358403 9359189|9359189|9362994|9362994|9359189|9362994|9359189|9362994 3R + 9358893 9358939 3'utr CG45050 FlyBase G41344.1 CAACAACCAGCACAACCGATTGCCTTGGTCGCCTGCTGAGCTGGGCC 10 9358917 0.947144414 4 10 43 1 1.079181246 0.416666667 0.1 0.25 10 0 0 12 3R:9358893-9358939 6 CG45050 FBtr0344367|FBtr0344363|FBtr0344370|FBtr0344364|FBtr0344366|FBtr0344368|FBtr0344365|FBtr0344369 9358403|9358403|9358403|9358403|9358403|9358403|9358403|9358403 9362994|9362994|9359189|9359189|9362994|9359189|9362994|9359189 TGAGCT 6mer3-8 dme-miR-1007-3p 3R + 9358897 9358941 3'utr CG45050 FlyBase G31202.1 AACCAGCACAACCGATTGCCTTGGTCGCCTGCTGAGCTGGGCCGA 6 9358915 0.957920849 5 6 27 1 0.84509804 0.571428571 0.166666667 0.285714286 6 0 0 7 3R:9358897-9358941 6 3.5 4850 FBgn0266410 13462.35667 672.7966667 1034.65 0.000259984 0.005202166 0.003382786 12 14 13 0.01 dme-miR-307a-3p 6mer2-7 GTTGTG 3R 9359487 9359492 + 3R_9359487_9359492_+ 1 1 1 0 CG45050 FBtr0344363|FBtr0344367|FBtr0344365|FBtr0344366 9358403|9358403|9358403|9358403 9362994|9362994|9362994|9362994 3R + 9359465 9359516 3'utr CG45050 FlyBase G41346.1 AAAAGAAACAAAGAATAACGCAGTTGTGTAGAGCTCCCTAAAAAGTTTGCTA 7 9359489 0.964368623 5 7 41 1 0.84509804 0.142857143 0 0 7 0 0 7 3R:9359465-9359516 6 CG45050 FBtr0344367|FBtr0344363|FBtr0344366|FBtr0344365 9358403|9358403|9358403|9358403 9362994|9362994|9362994|9362994 GTTGTG 6mer2-7 dme-miR-307a-3p 3R + 9359443 9359503 3'utr CG45050 FlyBase G31204.1 AAAATGTAAAAAAAACCTGAAGAAAAGAAACAAAGAATAACGCAGTTGTGTAGAGCTCCCT 8 9359488 0.789101953 4 7 28 1 1 0 0.125 0.3 8 0 0 10 3R:9359443-9359503 6 6 4851 FBgn0266410 13462.35667 672.7966667 1034.65 0.000445687 0.008917999 0.005799062 -2 -1 -1.5 0.01 dme-miR-33-5p 6mer2-7 AATGCA 3R 9359684 9359689 + 3R_9359684_9359689_+ 1 1 1 0 CG45050 FBtr0344363|FBtr0344367|FBtr0344365|FBtr0344366 9358403|9358403|9358403|9358403 9362994|9362994|9362994|9362994 3R + 9359664 9359846 3'utr CG45050 FlyBase G41348.1 TTAGTGAATCAAAGCAGGCGAATGCAGTGCAAGCGGCGTTTTTTCTTCGTTTTACTTTTTGCCCTCCTGTCCCTCTAACATTAAATTGAATTGATTTTAATTTTCTGATTTGCGATGAATTATATATATATATATGCATAATATTAACTATATCTACATCTATATATGTATGGTAGGATATGT 175 9359686 0.973776482 25 169 1043 0.970149254 1.989004616 0.263681592 0.125714286 0.23880597 175 5 1 195 3R:9359664-9359846 6 CG45050 FBtr0344367|FBtr0344363|FBtr0344366|FBtr0344365 9358403|9358403|9358403|9358403 9362994|9362994|9362994|9362994 AATGCA 6mer2-7 dme-miR-33-5p 3R + 9359531 9359791 3'utr CG45050 FlyBase G31205.1 CGCTAGACACGAGCGAGAGAGAGTATAGCTATATAGAGAGAGAGAGAGAGAGCGGAGAAGCGCGATTAGTGTAAAGCAACGTGGAGCATAACAACTCCCCTATACATAGAAATCTAAATATAATTATAATTAATTAGTGAATCAAAGCAGGCGAATGCAGTGCAAGCGGCGTTTTTTCTTCGTTTTACTTTTTGCCCTCCTGTCCCTCTAACATTAAATTGAATTGATTTTAATTTTCTGATTTGCGATGAATTATATATA 155 9359686 0.990584733 28 143 877 0.932773109 1.443262987 0.256302521 0.361290323 0.584033613 155 9 7 222 3R:9359531-9359791 6 75 4852 FBgn0266410 13462.35667 672.7966667 1034.65 0.00557109 0.111474987 0.072488281 -2 -2 -2 0.01 dme-miR-92b-3p 6mer2-7 TGCAAT 3R 9367795 9367800 - 3R_9367795_9367800_- 1 1 1 0 FER FBtr0333295|FBtr0082054|FBtr0082053|FBtr0082051|FBtr0082052|FBtr0333296 9367601|9367601|9367601|9367601|9367601|9367601 9368240|9368240|9368240|9368240|9368240|9368240 3R - 9367610 9367804 3'utr FER FlyBase G49343.1 ATTATGCAATCCCTACGTTTGTCAATTTGTTTCTAGACTTTGTATTCTATGTATATTTATTTACACCTAATTTACATTTCTACTTCGACTACGATTATGTTTACTCTAATACAACTAAGCTCTAAGTTAAAGCTTTAAGTTTTGCTGCGCTGCTGAAGTGAATAAATCATATGTGTACTATATATATATATATAC 39 9367771 0.989275467 23 38 364 0.978723404 1.361727836 0.276595745 0.179487179 0.319148936 39 0 1 46 3R:9367610-9367804 6 FER FBtr0082052|FBtr0333296|FBtr0082053|FBtr0082051|FBtr0333295|FBtr0082054 9367601|9367601|9367601|9367601|9367601|9367601 9368240|9368240|9368240|9368240|9368240|9368240 TGCAAT 6mer2-7 dme-miR-92b-3p 3R - 9367742 9367849 3'utr FER FlyBase G37271.1 AGTTGTTTGTGTTTTAGTTTTTAGGCAGTGATTCATAATTTGTATATTATGCAATCCCTACGTTTGTCAATTTGTTTCTAGACTTTGTATTCTATGTATATTTATTTA 15 9367777 0.993910834 14 15 189 1 1.301029996 0.35 0.266666667 0.45 15 0 0 20 3R:9367742-9367849 6 4 4853 FBgn0000723 580.6066667 19.26 29.57333333 0.006889346 0.20768432 0.135256988 -29 -23 -26 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3R 9367837 9367842 - 3R_9367837_9367842_- 1 0.988527931 0.994263966 0.008112 FER FBtr0333295|FBtr0082054|FBtr0082053|FBtr0082051|FBtr0082052|FBtr0333296 9367601|9367601|9367601|9367601|9367601|9367601 9368240|9368240|9368240|9368240|9368240|9368240 3R - 9367810 9367928 3'utr FER FlyBase G49344.1 AAAATAAAATAAAACTGATATTGTGTGTCTGCTTGAAGAACGGCGTTCGTAACCTAAGCTCATGAATTTATATATTTTTAGTTGTTTGTGTTTTAGTTTTTAGGCAGTGATTCATAATT 32 9367835 0.949820186 16 27 356 0.825 1.217483944 0.15 0.21875 0.375 32 6 1 33 3R:9367810-9367928 6 FER FBtr0082052|FBtr0333296|FBtr0082053|FBtr0082051|FBtr0333295|FBtr0082054 9367601|9367601|9367601|9367601|9367601|9367601 9368240|9368240|9368240|9368240|9368240|9368240 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 9367742 9367849 3'utr FER FlyBase G37271.1 AGTTGTTTGTGTTTTAGTTTTTAGGCAGTGATTCATAATTTGTATATTATGCAATCCCTACGTTTGTCAATTTGTTTCTAGACTTTGTATTCTATGTATATTTATTTA 15 9367833 0.993910834 14 15 189 1 1.301029996 0.35 0.266666667 0.45 15 0 0 20 3R:9367742-9367849 6 11 4854 FBgn0000723 580.6066667 19.26 29.57333333 0.0189457 0.57113188 0.371956718 -7 -9 -8 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3R 9368024 9368029 - 3R_9368024_9368029_- 1 1 1 0 FER FBtr0333295|FBtr0082054|FBtr0082053|FBtr0082051|FBtr0082052|FBtr0333296 9367601|9367601|9367601|9367601|9367601|9367601 9368240|9368240|9368240|9368240|9368240|9368240 3R - 9367962 9368079 3'utr FER FlyBase G49345.1 ATATATATTTTCTAGCCATGTAAATGTAAATTTCGATGTGTACTGTAGTGTGTGTTTGCCTGACTGAGCGTATGTTATAAATCCTTAATGTGCCAAAAACCGCAAGAGATCTTAAAAC 50 9368022 0.983521793 18 49 380 0.981481481 1.72427587 0.185185185 0.08 0.148148148 50 1 0 53 3R:9367962-9368079 6 FER FBtr0082052|FBtr0333296|FBtr0082053|FBtr0082051|FBtr0333295|FBtr0082054 9367601|9367601|9367601|9367601|9367601|9367601 9368240|9368240|9368240|9368240|9368240|9368240 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 9367976 9368077 3'utr FER FlyBase G37273.1 ATATATTTTCTAGCCATGTAAATGTAAATTTCGATGTGTACTGTAGTGTGTGTTTGCCTGACTGAGCGTATGTTATAAATCCTTAATGTGCCAAAAACCGCA 26 9368021 0.988657695 13 24 224 0.888888889 1.505149978 0.416666667 0.346153846 0.527777778 26 4 0 32 3R:9367976-9368077 6 23 4855 FBgn0000723 580.6066667 19.26 29.57333333 0.039613737 1.194184839 0.777727683 -7 -8 -7.5 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT 3R 9407808 9407813 + 3R_9407808_9407813_+ 1 1 1 0 CG8135 FBtr0082030 9407708 9407857 3R + 9407741 9407825 3'utr CG8135 FlyBase G41359.1 TCGTTACCGAGTATCTCAATATTTCGCTCGCGCTTAAGTATTTCCCGATGCCACTGCTGCTGCTGCTGTTCCTTTACACCCATGT 39 9407814 0.982540892 12 37 357 0.954545455 1.62324929 0.045454545 0.128205128 0.227272727 39 2 0 42 3R:9407741-9407825 6 CG8135 FBtr0082030 9407708 9407857 GTTCCT 6mer2-7 dme-miR-276a-3p 3R + 9407765 9407825 3'utr CG8135 FlyBase G31212.1 CGCTCGCGCTTAAGTATTTCCCGATGCCACTGCTGCTGCTGCTGTTCCTTTACACCCATGT 32 9407802 0.766737283 11 29 303 0.953488372 1.311753861 0 0.25 0.441860465 32 1 1 41 3R:9407765-9407825 6 27.5 4856 FBgn0037689 259 11.38666667 17.50333333 0.106177606 2.415105386 1.571129309 -6 6 0 0.01 dme-miR-283-5p 6mer3-8 TGATAT 3R 9417034 9417039 + 3R_9417034_9417039_+ 0.973138144 0.904891985 0.939015065 0.04825728 alpha-Man-II FBtr0082031|FBtr0334302 9416737|9416737 9417264|9417264 3R + 9417023 9417061 3'utr alpha-Man-II FlyBase G41367.1 ACGTTTTTTTGTGATATCCATCCAGTCCCACAGCAAGCA 10 9417043 0.954162842 4 10 57 1 1 0.3 0 0 10 0 0 10 3R:9417023-9417061 6 alpha-Man-II FBtr0334302|FBtr0082031 9416737|9416737 9417264|9417264 TGATAT 6mer3-8 dme-miR-283-5p 3R + 9417023 9417060 3'utr alpha-Man-II FlyBase G31216.1 ACGTTTTTTTGTGATATCCATCCAGTCCCACAGCAAGC 12 9417031 0.958834939 3 12 90 1 1.255272505 0.166666667 0.5 0.666666667 12 0 0 18 3R:9417023-9417060 6 11 4857 FBgn0011740 533.3733333 16.09 24.62333333 0.020623453 0.683654444 0.446730743 -9 3 -3 0.01 dme-miR-184-5p 6mer3-8 TGATAA 3R 9417154 9417159 + 3R_9417154_9417159_+ 1 1 1 0 alpha-Man-II FBtr0082031|FBtr0334302 9416737|9416737 9417264|9417264 3R + 9417142 9417194 3'utr alpha-Man-II FlyBase G41368.1 AAGTAGGCTTAGTGATAATGACGCAACTGCAATGATATTAATCTCGACGTTTG 18 9417150 0.754941413 6 15 106 0.85 1.230448921 0.3 0.111111111 0.2 18 3 0 17 3R:9417142-9417194 6 alpha-Man-II FBtr0334302|FBtr0082031 9416737|9416737 9417264|9417264 TGATAA 6mer3-8 dme-miR-184-5p 3R + 9417139 9417172 3'utr alpha-Man-II FlyBase G31217.1 GTAAAGTAGGCTTAGTGATAATGACGCAACTGCA 5 9417150 0.955146567 3 4 19 1 0.77815125 0.666666667 0.2 0.333333333 5 0 0 6 3R:9417139-9417172 6 5 4858 FBgn0011740 533.3733333 16.09 24.62333333 0.009374297 0.31075202 0.203059429 4 4 4 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 9446629 9446634 + 3R_9446629_9446634_+ 1 1 1 0 ps FBtr0082037|FBtr0082037|FBtr0082037|FBtr0111030|FBtr0111030|FBtr0111030 9446525|9446525|9446525|9446525|9446525|9446525 9449468|9449468|9449468|9449468|9449468|9449468 3R + 9446611 9446696 3'utr ps FlyBase G41394.1 ACGTTTGAACCCACGCACCTGTGAAATTCCCGGGCGGGATTATATATTCCACCAACCAGAAACCCACTCCCGTTACCGATCCCAAT 23 9446637 0.784179718 7 22 111 0.956521739 1.342422681 0.086956522 0 0 23 1 0 22 3R:9446611-9446696 6 ps FBtr0082037|FBtr0082037|FBtr0082037|FBtr0111030|FBtr0111030|FBtr0111030 9446525|9446525|9446525|9446525|9446525|9446525 9449468|9449468|9449468|9449468|9449468|9449468 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 9446612 9446653 3'utr ps FlyBase G31241.1 CGTTTGAACCCACGCACCTGTGAAATTCCCGGGCGGGATTAT 12 9446637 0.666209953 3 12 54 1 1.230448921 0.235294118 0.333333333 0.529411765 12 0 0 17 3R:9446612-9446653 6 14.5 4859 FBgn0261552 4666.596667 115.7866667 177.5266667 0.003107189 0.125230309 0.08167787 -8 -8 -8 0.01 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 9446922 9446929 + 3R_9446922_9446929_+ 0.63113665 0.63113665 0.63113665 0 ps FBtr0082037|FBtr0111030 9446525|9446525 9449468|9449468 3R + 9446714 9446998 3'utr ps FlyBase G41395.1 TAATTTGGCCCTAGAGCCCATTAGACATAGAAACAAAAGCCAAGCAGACACAGGCACATCATTGCAGACTCATTCCAGAGAGAGAAAAGAGGGTACGACTTATTGAGAGAGATATCCCATTCTAAGCATACAACGCATTCCGTGAGACATTCCGATAGACATTCGCAAAGGCTTTCCCAATAAATTCATTGACACTTATAGCGAAATTTCTAGTCAAGTTCTTGCCTCTCACCCATCCGCCAGCATATATGATCCATGATCCATGATCCGTCTTCGATATTGCAC 1093 9446921 0.966116545 44 1050 8281 0.965883245 2.628048173 0.081122062 0.16010979 0.304018196 1093 43 2 1274 3R:9446714-9446998 8 ps FBtr0082037|FBtr0111030 9446525|9446525 9449468|9449468 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 9446751 9446954 3'utr ps FlyBase G31242.1 AGCCAAGCAGACACAGGCACATCATTGCAGACTCATTCCAGAGAGAGAAAAGAGGGTACGACTTATTGAGAGAGATATCCCATTCTAAGCATACAACGCATTCCGTGAGACATTCCGATAGACATTCGCAAAGGCTTTCCCAATAAATTCATTGACACTTATAGCGAAATTTCTAGTCAAGTTCTTGCCTCTCACCCATCCGCC 612 9446921 0.982250215 24 587 4363 0.962039046 2.470802365 0.093275488 0.35130719 0.569414317 612 33 2 887 3R:9446751-9446954 8 755 4860 FBgn0261552 4666.596667 115.7866667 177.5266667 0.161788141 6.520612621 4.252882196 1 1 1 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 3R 9447087 9447092 + 3R_9447087_9447092_+ 0.993349731 1 0.996674866 0.004702472 ps FBtr0082037|FBtr0111030 9446525|9446525 9449468|9449468 3R + 9447049 9447262 3'utr ps FlyBase G41396.1 CCCAACCCAGAAAATTCGCACAGAACAGCAGCATCCGATAGCTTAGGATTATAAGGCAGTAATTAGGTTTAGCAGTTAGGTTGTGCATTGAGTAGATTGAATAAAACACATTCACTTTTCCATGTTGTTTAGGCCTAACGAATTTGTTCGATATACTTACGTGTAGCTGGGCGGATCGCCCAGTTGGCTAGTGCAATTCGTGGGTAACCATGCG 97 9447099 0.984852961 35 84 664 0.885964912 2.004321374 0.201754386 0.164948454 0.289473684 97 13 0 101 3R:9447049-9447262 6 ps FBtr0082037|FBtr0111030 9446525|9446525 9449468|9449468 TAGCTT 6mer3-8 dme-miR-79-3p 3R + 9447046 9447150 3'utr ps FlyBase G31244.1 AAACCCAACCCAGAAAATTCGCACAGAACAGCAGCATCCGATAGCTTAGGATTATAAGGCAGTAATTAGGTTTAGCAGTTAGGTTGTGCATTGAGTAGATTGAAT 24 9447063 0.979717813 11 22 155 0.931818182 1.612783857 0.409090909 0.5 0.727272727 24 3 0 41 3R:9447046-9447150 6 12 4861 FBgn0261552 4666.596667 115.7866667 177.5266667 0.002571467 0.103638876 0.067595479 -12 24 6 0.01 dme-miR-318-3p 6mer3-8 CCCAGT 3R 9447227 9447232 + 3R_9447227_9447232_+ 0.999868813 0.999994088 0.999931451 8.86E-05 ps FBtr0082037|FBtr0111030 9446525|9446525 9449468|9449468 3R + 9447049 9447262 3'utr ps FlyBase G41396.1 CCCAACCCAGAAAATTCGCACAGAACAGCAGCATCCGATAGCTTAGGATTATAAGGCAGTAATTAGGTTTAGCAGTTAGGTTGTGCATTGAGTAGATTGAATAAAACACATTCACTTTTCCATGTTGTTTAGGCCTAACGAATTTGTTCGATATACTTACGTGTAGCTGGGCGGATCGCCCAGTTGGCTAGTGCAATTCGTGGGTAACCATGCG 97 9447233 0.984852961 35 84 664 0.885964912 2.004321374 0.201754386 0.164948454 0.289473684 97 13 0 101 3R:9447049-9447262 6 ps FBtr0082037|FBtr0111030 9446525|9446525 9449468|9449468 CCCAGT 6mer3-8 dme-miR-318-3p 3R + 9447166 9447264 3'utr ps FlyBase G31245.1 TTCCATGTTGTTTAGGCCTAACGAATTTGTTCGATATACTTACGTGTAGCTGGGCGGATCGCCCAGTTGGCTAGTGCAATTCGTGGGTAACCATGCGTA 33 9447233 0.975344911 14 33 207 1 1.755874856 0.192982456 0.424242424 0.666666667 33 0 0 57 3R:9447166-9447264 6 30.5 4862 FBgn0261552 4666.596667 115.7866667 177.5266667 0.006535812 0.263415477 0.171805175 -6 -6 -6 0.01 dme-miR-2535b-3p 6mer3-8 CCGTGA 3R 9447369 9447374 + 3R_9447369_9447374_+ 0.999997871 0.999978848 0.999988359 1.35E-05 ps FBtr0082037|FBtr0111030 9446525|9446525 9449468|9449468 3R + 9447317 9447394 3'utr ps FlyBase G41397.1 GATTTTACCTCAGTGTCAGTTGTAAGGTCGTTAGGTCATTAGGTTAGGCCCACCGTGACCCCTTTTGCAGCCAATTGA 18 9447381 0.738395497 9 16 123 0.85 1.230448921 0.25 0.111111111 0.2 18 3 0 17 3R:9447317-9447394 6 ps FBtr0082037|FBtr0111030 9446525|9446525 9449468|9449468 CCGTGA 6mer3-8 dme-miR-2535b-3p 3R + 9447317 9447390 3'utr ps FlyBase G31246.1 GATTTTACCTCAGTGTCAGTTGTAAGGTCGTTAGGTCATTAGGTTAGGCCCACCGTGACCCCTTTTGCAGCCAA 11 9447372 0.984784711 7 9 76 0.777777778 1.146128036 0 0.454545455 0.666666667 11 4 0 14 3R:9447317-9447390 6 6.5 4863 FBgn0261552 4666.596667 115.7866667 177.5266667 0.001392878 0.056137725 0.036614218 -12 -3 -7.5 0.01 dme-miR-12-5p 6mer3-8 AATACT 3R 9448832 9448837 + 3R_9448832_9448837_+ 0.999999999 1 1 0 ps FBtr0111032|FBtr0302692|FBtr0082037|FBtr0344283|FBtr0111030 9447848|9447848|9446525|9447848|9446525 9455500|9455500|9449468|9455500|9449468 3R + 9448816 9448864 5'utr ps FlyBase G41403.1 AACACTTGCTATGGCTAATACTGCAACTGCAAACCGGCTAGTGAAAAAT 9 9448843 0.909071572 4 9 37 1 1.079181246 0.083333333 0.333333333 0.5 9 0 0 12 3R:9448816-9448864 6 ps FBtr0111032|FBtr0344283|FBtr0082037|FBtr0111030|FBtr0302692 9447848|9447848|9446525|9446525|9447848 9455500|9455500|9449468|9449468|9455500 AATACT 6mer3-8 dme-miR-12-5p 3R + 9448821 9448872 5'utr ps FlyBase G31250.1 TTGCTATGGCTAATACTGCAACTGCAAACCGGCTAGTGAAAAATACAACTTC 6 9448843 0.92836899 3 6 25 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3R:9448821-9448872 6 6.5 4864 FBgn0261552 4666.596667 115.7866667 177.5266667 0.001392878 0.056137725 0.036614218 -11 -11 -11 0.01 dme-miR-980-5p 7mer-A1 AAAAACA 3R 9449286 9449292 + 3R_9449286_9449292_+ 0.782911823 0.782911824 0.782911824 0 ps FBtr0111032|FBtr0302692|FBtr0082037|FBtr0344283|FBtr0111030 9447848|9447848|9446525|9447848|9446525 9455500|9455500|9449468|9455500|9449468 3R + 9449282 9449346 5'utr ps FlyBase G41408.1 AAAAAAAAACACATTGCGATTTGTTAGTTGCCAGTCTGAGAACTGCACTTCTTACCTTTTTACTT 43 9449309 0.918239051 12 42 333 0.965517241 1.271066772 0.189655172 0.255813953 0.448275862 43 0 2 56 3R:9449282-9449346 7 ps FBtr0111032|FBtr0344283|FBtr0082037|FBtr0111030|FBtr0302692 9447848|9447848|9446525|9446525|9447848 9455500|9455500|9449468|9449468|9455500 AAAAACA 7mer-A1 dme-miR-980-5p 3R + 9449281 9449342 5'utr ps FlyBase G31252.1 AAAAAAAAAACACATTGCGATTTGTTAGTTGCCAGTCTGAGAACTGCACTTCTTACCTTTTT 16 9449308 0.979999002 10 16 118 1 1.361727836 0.217391304 0.3125 0.52173913 16 0 0 23 3R:9449281-9449342 7 21.5 4865 FBgn0261552 4666.596667 115.7866667 177.5266667 0.004607212 0.18568632 0.121108566 -23 -22 -22.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 9449595 9449600 + 3R_9449595_9449600_+ 0.999999999 1 1 0 ps FBtr0111032|FBtr0302692|FBtr0344283 9447848|9447848|9447848 9455500|9455500|9455500 3R + 9449576 9449642 3'utr ps FlyBase G41409.1 ACGTCAAAACAAACAATCCACCAAACAATTTCCCTTATTAATTTTAAGTATTGTGCAATTATTAAAC 19 9449604 0.986878758 6 19 167 1 1.322219295 0 0.052631579 0.142857143 19 0 0 21 3R:9449576-9449642 6 ps FBtr0111032|FBtr0344283|FBtr0302692 9447848|9447848|9447848 9455500|9455500|9455500 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 9449562 9449747 3'utr ps FlyBase G31253.1 AGGGGTTTCTTCATACGTCAAAACAAACAATCCACCAAACAATTTCCCTTATTAATTTTAAGTATTGTGCAATTATTAAACATTGTTTCAACGAACATTTCATAACGATTATATGTACATATCTATCTAGAAACGCAGTGTAAAGACAAAAGATGTTAACATCACATTTAAAAAACTCCCTGTTCA 21 9449604 0.989514435 12 18 173 0.852941176 0.763427994 0.117647059 0.428571429 0.647058824 21 1 4 29 3R:9449562-9449747 6 11.5 4866 FBgn0261552 4666.596667 115.7866667 177.5266667 0.002464323 0.09932059 0.064779 -9 -9 -9 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 9451274 9451281 + 3R_9451274_9451281_+ 0.650171354 0.650171355 0.650171354 0 ps FBtr0111032|FBtr0111032|FBtr0111032|FBtr0302692|FBtr0302692|FBtr0302692|FBtr0344283|FBtr0344283|FBtr0344283 9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848 9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500 3R + 9451253 9451297 3'utr ps FlyBase G41415.2 ATACTTATATTTGTACTGGATCTGTGATATGTATTTAAAAACAAC 198 9451273 0.833646553 11 193 2175 0.974358974 2.357934847 0.05982906 0.176767677 0.303418803 198 6 0 228 3R:9451253-9451297 8 ps FBtr0111032|FBtr0111032|FBtr0111032|FBtr0344283|FBtr0344283|FBtr0344283|FBtr0302692|FBtr0302692|FBtr0302692 9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848 9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 9451253 9451301 3'utr ps FlyBase G31256.1 ATACTTATATTTGTACTGGATCTGTGATATGTATTTAAAAACAACAAAG 159 9451273 0.795989041 12 153 1644 0.974895397 2.367355921 0.129707113 0.364779874 0.577405858 159 6 0 233 3R:9451253-9451301 8 177.5 4867 FBgn0261552 4666.596667 115.7866667 177.5266667 0.038036285 1.532991709 0.999849788 1 1 1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 9453053 9453059 + 3R_9453053_9453059_+ 0.801957661 0.801970437 0.801964049 8.98E-06 ps FBtr0111032|FBtr0111032|FBtr0111032|FBtr0302692|FBtr0302692|FBtr0302692|FBtr0344283|FBtr0344283|FBtr0344283 9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848 9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500 3R + 9453030 9453070 3'utr ps FlyBase G41419.1 AAGGTATAAAACGTAGTCGTTAGTGTGATAAATAAAATTAA 11 9453051 0.976462237 6 11 78 1 1.113943352 0.076923077 0.181818182 0.307692308 11 0 0 13 3R:9453030-9453070 7 ps FBtr0111032|FBtr0111032|FBtr0111032|FBtr0344283|FBtr0344283|FBtr0344283|FBtr0302692|FBtr0302692|FBtr0302692 9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848 9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 9453016 9453071 3'utr ps FlyBase G31258.1 ATACACATACACTAAAGGTATAAAACGTAGTCGTTAGTGTGATAAATAAAATTAAT 8 9453052 0.975598725 4 8 52 1 1.041392685 0.181818182 0.375 0.545454545 8 0 0 11 3R:9453016-9453071 7 8.5 4868 FBgn0261552 4666.596667 115.7866667 177.5266667 0.001821456 0.073410871 0.047880131 2 1 1.5 0.01 dme-miR-33-5p 6mer3-8 CAATGC 3R 9505795 9505800 + 3R_9505795_9505800_+ 1 1 1 0 CG8149 FBtr0082061 9505704 9505865 3R + 9505754 9505833 3'utr CG8149 FlyBase G41425.1 TTCGGGAGTAGGCCCTATCATGTATCAAACCCCAAAGCCACCAATGCTTGTAGTAATTAAGCAAAAATTCAATAAACACA 12 9505800 0.936535731 4 12 48 1 1.204119983 0.0625 0.333333333 0.5 12 0 0 16 3R:9505754-9505833 6 CG8149 FBtr0082061 9505704 9505865 CAATGC 6mer3-8 dme-miR-33-5p 3R + 9505786 9505836 3'utr CG8149 FlyBase G31260.1 CAAAGCCACCAATGCTTGTAGTAATTAAGCAAAAATTCAATAAACACAAAA 5 9505801 0.962290978 4 4 20 1 0.903089987 0 0.5 0.75 4 0 0 8 3R:9505786-9505836 6 5 4869 FBgn0037700 973.67 104.3033333 159.9166667 0.00513521 0.047937107 0.031266285 -5 -6 -5.5 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 3R 9506041 9506046 - 3R_9506041_9506046_- 0.579475367 0.551608303 0.565541835 0.019705015 rump FBtr0304684|FBtr0082123 9505851|9505851 9507316|9506143 3R - 9506025 9506155 stop_codon rump FlyBase G49389.1 ACATACTTTTAAGTCAGGCAATTCAGTTCAAAAGTTATTCTACGTTTCTTGTCGCCAATTCACACTTCAAACAGCGCGATGACCAATGAAATGAGCTGATATTCCTTATTTGACTCGCAATACGGAATTAA 30 9506045 0.984167922 11 29 228 0.96875 1.491361694 0.3125 0.066666667 0.125 30 1 0 31 3R:9506025-9506155 6 rump FBtr0304684|FBtr0082123 9505851|9505851 9507316|9506143 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 9506025 9506084 3'utr rump FlyBase G37306.1 CAGCGCGATGACCAATGAAATGAGCTGATATTCCTTATTTGACTCGCAATACGGAATTAA 15 9506046 0.828823174 8 15 100 1 1.322219295 0.238095238 0.266666667 0.476190476 15 0 0 21 3R:9506025-9506084 6 11.5 4870 FBgn0267790 1132.323333 61.17 93.53666667 0.01015611 0.188000654 0.122946438 -1 0 -0.5 0.01 dme-miR-33-5p 6mer3-8 CAATGC 3R 9506575 9506580 - 3R_9506575_9506580_- 1 1 1 0 rump FBtr0304684 9505851 9507316 3R - 9506518 9506619 5'utr rump FlyBase G49393.1 CAACTACAGCGGCGGTGGCGGCTCCAGCAATTTGGGATACAATGCTTACAGCAGCTCTGGTGGAATGGGCGGCGGCAACGGAGGAGTTGGTGTTGATGGCAA 58 9506588 0.946828513 10 55 246 0.954545455 1.498310554 0.318181818 0.137931034 0.242424242 58 2 1 63 3R:9506518-9506619 6 rump FBtr0304684 9505851 9507316 CAATGC 6mer3-8 dme-miR-33-5p 3R - 9506578 9506665 5'utr rump FlyBase G37309.2 ACAGCAGCGGCGGCACCGGTGGTGGCAATAGCTATAGCTCTGGAAACAACTACAGCGGCGGTGGCGGCTCCAGCAATTTGGGATACAA 17 9506588 0.981066321 5 16 39 0.954545455 1.322219295 0.227272727 0.235294118 0.409090909 17 1 0 21 3R:9506578-9506665 2 21 4871 FBgn0267790 1132.323333 61.17 93.53666667 0.018545939 0.343305542 0.224510887 8 8 8 0.01 dme-miR-277-3p 6mer2-7 GCATTT 3R 9506816 9506821 - 3R_9506816_9506821_- 1 1 1 0 rump FBtr0304684 9505851 9507316 3R - 9506675 9506871 5'utr rump FlyBase G49394.1 AGGAAACAATACCGGTTCCGGCGGATTGAACCTAAACAATCTGAATCCCAGCATTTTGGCTGCCGTGGTCGGCAATCTTGGTAACCAGGGAGGGAATTTAAGCAATCCCTTGCTGTCCTCTTCGCTGAGCAACCTGGGTCTCAATCTGGGCAACTCCGGCAATGATGACAACCTGCCGCCAAGCAATGTGGGTCTTT 38 9506816 0.975631526 20 37 228 0.977777778 1.643452676 0.111111111 0.157894737 0.288888889 38 1 0 44 3R:9506675-9506871 6 rump FBtr0304684 9505851 9507316 GCATTT 6mer2-7 dme-miR-277-3p 3R - 9506794 9506859 5'utr rump FlyBase G37311.1 CGGTTCCGGCGGATTGAACCTAAACAATCTGAATCCCAGCATTTTGGCTGCCGTGGTCGGCAATCT 9 9506816 0.964273993 7 9 46 1 1.041392685 0.090909091 0.222222222 0.363636364 9 0 0 11 3R:9506794-9506859 6 11.5 4872 FBgn0267790 1132.323333 61.17 93.53666667 0.01015611 0.188000654 0.122946438 -5 -5 -5 0.01 dme-bantam-3p 7mer-A1 GATCTCA 3R 9507016 9507022 - 3R_9507016_9507022_- 0.823349562 0.823349562 0.823349562 0 rump FBtr0304684 9505851 9507316 3R - 9506996 9507033 5'utr rump FlyBase G49397.1 CGCTCAGCAGGGATCTCAGCTGGGATCGGTGGGTAGCC 5 9507010 0.716381758 4 4 20 0.833333333 0.698970004 0.166666667 0.2 0.333333333 5 1 0 5 3R:9506996-9507033 7 rump FBtr0304684 9505851 9507316 GATCTCA 7mer-A1 dme-bantam-3p 3R - 9506993 9507085 5'utr rump FlyBase G37313.1 TGGCTCACAACCTTCCCAATGGTGGTCAGAGCCAGGGCCAGTTGCTTGGCAACGCTCAGCAGGGATCTCAGCTGGGATCGGTGGGTAGCCAAC 16 9507013 0.956899344 6 13 63 0.846153846 0.740362689 0 0.4375 0.653846154 16 1 3 22 3R:9506993-9507085 7 7 4873 FBgn0267790 1132.323333 61.17 93.53666667 0.00618198 0.114435181 0.074836962 -12 -9 -10.5 0.01 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 9507272 9507278 - 3R_9507272_9507278_- 0.823349562 0.823349561 0.823349561 0 rump FBtr0304684 9505851 9507316 3R - 9507095 9507364 stop_codon rump FlyBase G49398.2 AGAAGCTCAAGCAGGTCTTCAAGCTGGCCGGCAAGGTGCAGAGCGTAGACCTTTCACTGGACAAGGAGGGCAACAGCCGCGGTTTTGCTGTGATCGAGTACGACCATCCGGTGGAGGCTGTTCAGGCCATTTCCATGCTGGATCGTCAGATGCTATTCGACCGTCGTATGACCGTGCGCCTGGACCGAATTCCGGATAAGAATGAAGGCATAAAGCTGCCCGAGGGCTTGGGAGGTGTGGGCATCGGCCTGGGACCCAACGGCGAGCCAC 159 9507280 0.994492437 32 153 828 0.97382199 1.792391689 0.188481675 0.169811321 0.308900524 159 3 2 186 3R:9507095-9507364 7 rump FBtr0304684 9505851 9507316 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R - 9507131 9507318 stop_codon rump FlyBase G37314.1 AGACCTTTCACTGGACAAGGAGGGCAACAGCCGCGGTTTTGCTGTGATCGAGTACGACCATCCGGTGGAGGCTGTTCAGGCCATTTCCATGCTGGATCGTCAGATGCTATTCGACCGTCGTATGACCGTGCGCCTGGACCGAATTCCGGATAAGAATGAAGGCATAAAGCTGCCCGAGGGCTTGGGAG 89 9507280 0.973948721 21 82 503 0.943262411 2.123851641 0.219858156 0.449438202 0.65248227 89 8 0 133 3R:9507131-9507318 7 67.5 4874 FBgn0267790 1132.323333 61.17 93.53666667 0.059611948 1.103482099 0.721642137 2 2 2 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 9511154 9511159 - 3R_9511154_9511159_- 1 1 1 0 Ras85D FBtr0082122 9510559 9511507 3R - 9511105 9511173 3'utr Ras85D FlyBase G49407.1 ATGAAAATGAATATGTACCTCTACATAAAAACTATGAATACTGTTGTAACTGCCTTGGTTCAGCTGCTA 12 9511160 0.669669824 9 12 85 1 1.113943352 0.076923077 0.083333333 0.153846154 12 0 0 13 3R:9511105-9511173 6 Ras85D FBtr0082122 9510559 9511507 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 9511142 9511174 3'utr Ras85D FlyBase G37325.1 AATGAAAATGAATATGTACCTCTACATAAAAAC 10 9511160 0.680185836 3 9 59 0.916666667 0.740362689 0.416666667 0.2 0.333333333 10 0 1 11 3R:9511142-9511174 6 8.5 4875 FBgn0003205 1314.34 81.98666667 125.6566667 0.006467124 0.103675394 0.06764464 1 1 1 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3R 9511258 9511263 - 3R_9511258_9511263_- 1 1 1 0 Ras85D FBtr0082122 9510559 9511507 3R - 9511228 9511292 3'utr Ras85D FlyBase G49408.1 ATGTACGTCGAAATGATTTTGTGAATGTGTGTGTTTTGTGTCGTTTGAAAGGCTGCGAGGCGCCC 42 9511275 0.993234758 8 40 474 0.959183673 1.371067862 0.102040816 0.142857143 0.265306122 42 1 1 47 3R:9511228-9511292 6 Ras85D FBtr0082122 9510559 9511507 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 9511226 9511291 3'utr Ras85D FlyBase G37326.1 TGTACGTCGAAATGATTTTGTGAATGTGTGTGTTTTGTGTCGTTTGAAAGGCTGCGAGGCGCCCTT 24 9511275 0.992974688 7 21 249 0.942857143 1.51851394 0.285714286 0.333333333 0.542857143 24 2 0 33 3R:9511226-9511291 6 25 4876 FBgn0003205 1314.34 81.98666667 125.6566667 0.019020953 0.304927631 0.198954824 12 12 12 0.01 dme-miR-92b-3p 8mer-m1 GTGCAATT 3R 9511342 9511349 - 3R_9511342_9511349_- 0.596698356 0.596698356 0.596698356 0 Ras85D FBtr0082122 9510559 9511507 3R - 9511330 9511379 3'utr Ras85D FlyBase G49409.1 AAACACACACATGTGGGAGCGTGTTGGTCGGTGCAATTGTCAGATAAAAG 28 9511343 0.864359564 6 27 156 0.967741935 1.477121255 0.258064516 0.107142857 0.193548387 28 1 0 30 3R:9511330-9511379 8 Ras85D FBtr0082122 9510559 9511507 GTGCAATT 8mer-m1 dme-miR-92b-3p 3R - 9511325 9511365 3'utr Ras85D FlyBase G37327.1 GGGAGCGTGTTGGTCGGTGCAATTGTCAGATAAAAGAAGAG 8 9511343 0.828602163 3 7 46 1 1.079181246 0.5 0.25 0.5 8 0 0 12 3R:9511325-9511365 8 15.5 4877 FBgn0003205 1314.34 81.98666667 125.6566667 0.011792991 0.189055131 0.123351991 -6 -6 -6 0.01 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 9536064 9536070 - 3R_9536064_9536070_- 0.823349516 0.823348647 0.823349081 6.36E-07 mura FBtr0082116 9535623 9539095 3R - 9536022 9536096 3'utr mura FlyBase G49422.1 ACAAACAAAAAAAATTATAAAGTTTTGCTGTGATGTACGTTATATATATTTAATTACATAAAATGCAATAAAATT 185 9536072 0.991835807 10 178 1989 0.964444444 2.035429738 0.062222222 0.183783784 0.328888889 185 7 1 217 3R:9536022-9536096 7 mura FBtr0082116 9535623 9539095 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R - 9536043 9536096 3'utr mura FlyBase G37344.1 ACAAACAAAAAAAATTATAAAGTTTTGCTGTGATGTACGTTATATATATTTAAT 135 9536072 0.891468887 10 128 1418 0.930693069 2.274157849 0.059405941 0.333333333 0.554455446 135 14 0 188 3R:9536043-9536096 7 158.5 4878 FBgn0037705 215.4033333 4.16 6.31 0.73582891 38.10096154 25.11885895 2 2 2 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 3R 9538817 9538822 - 3R_9538817_9538822_- 1 1 1 0 mura FBtr0082118|FBtr0082117|FBtr0082116 9538152|9538152|9535623 9539095|9539095|9539095 3R - 9538766 9538840 3'utr mura FlyBase G49428.1 AACTCGCCGCCTCTTCAATAGCTTGTCTTAGACATTAGTTCGTATGTGAGTAATGGTAACCGTAATTAGGAGTAA 24 9538822 0.987243422 7 24 208 1 1.397940009 0 0.041666667 0.08 24 0 0 25 3R:9538766-9538840 6 mura FBtr0082118|FBtr0082117|FBtr0082116 9538152|9538152|9535623 9539095|9539095|9539095 TAGCTT 6mer3-8 dme-miR-79-3p 3R - 9538795 9538838 3'utr mura FlyBase G37348.1 CTCGCCGCCTCTTCAATAGCTTGTCTTAGACATTAGTTCGTATG 13 9538813 0.845101812 4 10 116 0.823529412 0.84509804 0.058823529 0.230769231 0.411764706 13 2 1 14 3R:9538795-9538838 6 16.5 4879 FBgn0037705 215.4033333 4.16 6.31 0.076600486 3.966346154 2.614896989 0 -9 -4.5 0.01 dme-miR-79-3p 6mer2-7 AGCTTT 3R 9539063 9539068 - 3R_9539063_9539068_- 0.999572692 0.999999999 0.999786346 0.000302147 mura FBtr0082118|FBtr0082117|FBtr0082116 9538152|9538152|9535623 9539095|9539095|9539095 3R - 9539014 9539076 3'utr mura FlyBase G49430.1 ACACCTCAAGCTTTCGCTTTTCCGGGCGATGAGTGATCGGGACAGAGGAGCATTCCGGGCGTG 13 9539064 0.974933047 6 12 76 1 1.204119983 0.0625 0.230769231 0.375 13 0 0 16 3R:9539014-9539076 6 mura FBtr0082118|FBtr0082117|FBtr0082116 9538152|9538152|9535623 9539095|9539095|9539095 AGCTTT 6mer2-7 dme-miR-79-3p 3R - 9539044 9539083 3'utr mura FlyBase G37349.1 ATTCCACACACCTCAAGCTTTCGCTTTTCCGGGCGATGAG 5 9539057 0.976117145 3 5 35 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 3R:9539044-9539083 6 7.5 4880 FBgn0037705 215.4033333 4.16 6.31 0.034818403 1.802884615 1.18858954 -4 -11 -7.5 0.01 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 9557507 9557514 + 3R_9557507_9557514_+ 0.625364269 0.625364269 0.625364269 0 CG8199 FBtr0082067 9557435 9557776 3R + 9557435 9557527 stop_codon CG8199 FlyBase G41466.2 AGATTCCAGATAGGTGCCATAAAGATGCTAACAAATCAGAAATCAAAACGAACCGAGAGACTCGATCGAAAGTGCATTTATTATGATTAAGCA 26 9557513 0.873772367 11 21 135 0.909090909 1.176091259 0.212121212 0.153846154 0.333333333 26 2 1 30 3R:9557435-9557527 8 CG8199 FBtr0082067 9557435 9557776 TGCATTTA 8mer-A1 dme-miR-277-3p 3R + 9557471 9557533 3'utr CG8199 FlyBase G31285.2 CAGAAATCAAAACGAACCGAGAGACTCGATCGAAAGTGCATTTATTATGATTAAGCAATAGGC 14 9557513 0.979985702 6 10 72 0.857142857 1.255272505 0.380952381 0.428571429 0.619047619 14 3 0 18 3R:9557471-9557533 8 10.5 4881 FBgn0037709 100.1133333 7.073333333 10.93 0.104881135 1.484448633 0.960658737 -6 -6 -6 0.01 "dme-miR-995-3p,dme-miR-998-3p" 6mer2-7 GGTGCT 3R 9572470 9572475 - 3R_9572470_9572475_- 1 1 1 0 CG9399 FBtr0334657|FBtr0082110 9571909|9571909 9572496|9572496 3R - 9572381 9572547 stop_codon CG9399 FlyBase G49468.1 AGTCAGGAGAAGCTGAAGCAGGAGCAGCAGCAGCCGGCGGTGCAAAATTAGATACATATCGAATCGAATACCGGTGCTGTCCCCTTTATATAGACTTTAATCGAACTTTTATGTACATACAAATCCCACAACGCGCAACGTAAACGAAAGGATTAAGAGGAAGCTGT 125 9572457 0.98714771 18 120 1049 0.965034965 1.838849091 0.174825175 0.128 0.237762238 125 4 1 138 3R:9572381-9572547 6 CG9399 FBtr0334657|FBtr0082110 9571909|9571909 9572496|9572496 GGTGCT 6mer2-7 "dme-miR-995-3p,dme-miR-998-3p" 3R - 9572420 9572498 stop_codon CG9399 FlyBase G37384.1 AGATACATATCGAATCGAATACCGGTGCTGTCCCCTTTATATAGACTTTAATCGAACTTTTATGTACATACAAATCCCA 58 9572457 0.991124936 12 50 530 0.904761905 1.181843588 0.202380952 0.327586207 0.535714286 58 4 4 76 3R:9572420-9572498 6 68 4882 FBgn0037715 98.66666667 11.74333333 17.94 0.689189189 5.790519444 3.790412486 -18 -18 -18 0.01 dme-miR-965-3p 7mer-m8 TACGCTT 3R 9575015 9575021 - 3R_9575015_9575021_- 0.620204855 0.620204855 0.620204855 0 Kap-alpha3 FBtr0301189|FBtr0082108|FBtr0082106|FBtr0082107 9574962|9574482|9574962|9574482 9575473|9575473|9575473|9575473 3R - 9574972 9575075 3'utr Kap-alpha3 FlyBase G49473.1 AGATTTCAAAAAGAATGTAGACCTATTTGATTTATATGAAATTATTTAAATATTTACGCTTCTGATTTGTAATTGAAATTACATATGTATACATTTCTAACATG 76 9575022 0.990178922 12 76 761 1 1.954242509 0.033333333 0.171052632 0.3 76 0 0 90 3R:9574972-9575075 7 Kap-alpha3 FBtr0082108|FBtr0301189|FBtr0082107|FBtr0082106 9574482|9574962|9574482|9574962 9575473|9575473|9575473|9575473 TACGCTT 7mer-m8 dme-miR-965-3p 3R - 9574992 9575070 3'utr Kap-alpha3 FlyBase G37387.1 TCAAAAAGAATGTAGACCTATTTGATTTATATGAAATTATTTAAATATTTACGCTTCTGATTTGTAATTGAAATTACAT 36 9575022 0.843972863 10 35 331 0.955555556 1.633468456 0.044444444 0.25 0.4 36 2 0 43 3R:9574992-9575070 7 47 4883 FBgn0027338 3256.33 173.6 265.9533333 0.014433427 0.270737327 0.176722733 1 1 1 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3R 9575200 9575205 - 3R_9575200_9575205_- 1 1 1 0 Kap-alpha3 FBtr0301189|FBtr0082108|FBtr0082106|FBtr0082107 9574962|9574482|9574962|9574482 9575473|9575473|9575473|9575473 3R - 9575186 9575236 3'utr Kap-alpha3 FlyBase G49475.1 CCGCTGCAGCCGTTTTAGCTTCTCTCAATTCTGTGTTAACAAAATTACAAA 45 9575208 0.750132505 4 41 459 0.92 1.662757832 0.08 0.111111111 0.2 45 4 0 46 3R:9575186-9575236 6 Kap-alpha3 FBtr0082108|FBtr0301189|FBtr0082107|FBtr0082106 9574482|9574962|9574482|9574962 9575473|9575473|9575473|9575473 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 9575185 9575228 3'utr Kap-alpha3 FlyBase G37389.1 GCCGTTTTAGCTTCTCTCAATTCTGTGTTAACAAAATTACAAAA 23 9575208 0.770431835 5 22 235 0.965517241 1.447158031 0.172413793 0.260869565 0.413793103 23 1 0 28 3R:9575185-9575228 6 33 4884 FBgn0027338 3256.33 173.6 265.9533333 0.010134108 0.190092166 0.124081919 3 3 3 0.01 dme-miR-277-3p 6mer3-8 TGCATT 3R 9586104 9586109 + 3R_9586104_9586109_+ 1 1 1 0 CG8301 FBtr0082073 9586040 9586648 3R + 9586078 9586129 3'utr CG8301 FlyBase G41488.1 AGCCAAGCACAGTGCAGAAACTGCAATGCATTGGAGCGTAGCTCCCGAAACT 30 9586109 0.898846823 5 30 152 1 1.568201724 0.405405405 0.166666667 0.324324324 30 0 0 37 3R:9586078-9586129 6 CG8301 FBtr0082073 9586040 9586648 TGCATT 6mer3-8 dme-miR-277-3p 3R + 9586086 9586137 3'utr CG8301 FlyBase G31302.1 ACAGTGCAGAAACTGCAATGCATTGGAGCGTAGCTCCCGAAACTCAAGCTTA 25 9586109 0.90114001 2 24 124 1 1.633468456 0.465116279 0.48 0.697674419 25 0 0 43 3R:9586086-9586137 6 27 4885 FBgn0037717 95.66666667 3.806666667 5.923333333 0.282229965 7.092819615 4.558244232 -5 -5 -5 0.01 dme-bantam-3p 6mer2-7 GATCTC 3R 9586206 9586211 + 3R_9586206_9586211_+ 1 1 1 0 CG8301 FBtr0082073 9586040 9586648 3R + 9586141 9586236 3'utr CG8301 FlyBase G41489.1 AGACCATATACATACATGTACCCTCCATCCAATTACACTTACTAGACCATATGCACACACGCAGCGATCTCTGGAACGTGAAAGTGCTTAGAGCTT 28 9586212 0.937666109 5 27 108 0.971428571 1.531478917 0.4 0.178571429 0.342857143 28 1 0 34 3R:9586141-9586236 6 CG8301 FBtr0082073 9586040 9586648 GATCTC 6mer2-7 dme-bantam-3p 3R + 9586188 9586229 3'utr CG8301 FlyBase G31303.1 CATATGCACACACGCAGCGATCTCTGGAACGTGAAAGTGCTT 16 9586212 0.739414282 3 16 59 1 1.477121255 0.266666667 0.625 0.8 16 0 0 30 3R:9586188-9586229 6 19.5 4886 FBgn0037717 95.66666667 3.806666667 5.923333333 0.203832753 5.122591944 3.292065279 -6 -6 -6 0.01 dme-miR-11-3p 7mer-m1 TGTGATG 3R 9589304 9589310 + 3R_9589304_9589310_+ 0.612071121 0.612071121 0.612071121 0 P58IPK FBtr0082074 9589281 9589581 3R + 9589238 9589339 stop_codon P58IPK FlyBase G41500.1 TTCCAACACGGGTCGCCGTTCCAGTTCAAGTTCCACTTCAATTAGTCAGCCAGCAGCCATTTGCTTTGTGATGTCCTAGCCGCGATCCCCGATATCCTTTAA 31 9589303 0.984221303 14 29 226 0.942857143 1.51851394 0.114285714 0.129032258 0.228571429 31 2 0 33 3R:9589238-9589339 7 P58IPK FBtr0082074 9589281 9589581 TGTGATG 7mer-m1 dme-miR-11-3p 3R + 9589277 9589328 stop_codon P58IPK FlyBase G31308.1 AATTAGTCAGCCAGCAGCCATTTGCTTTGTGATGTCCTAGCCGCGATCCCCG 15 9589303 0.666256852 5 12 99 0.92 1.06069784 0.24 0.466666667 0.68 15 1 1 23 3R:9589277-9589328 7 17.5 4887 FBgn0037718 1190.153333 64.61333333 98.40666667 0.014703988 0.270841931 0.17783348 1 1 1 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 3R 9589517 9589522 - 3R_9589517_9589522_- 1 1 1 0 bocksbeutel FBtr0100537|FBtr0082105 9589466|9589466 9589729|9589773 3R - 9589479 9589586 3'utr bocksbeutel FlyBase G49488.1 CAACTCAATTTGCCAAGTCTTTAATTGCTTGTTCTCGCATATTGTTTCTTTTTATACATAATTAGAAAAATGTACTACATTATAATTATTGTATTGTATTAAATAAAC 174 9589516 0.982220096 8 173 1289 0.99537037 2.33243846 0.041666667 0.224137931 0.375 174 1 0 215 3R:9589479-9589586 6 bocksbeutel FBtr0100537|FBtr0082105 9589466|9589466 9589729|9589773 GAAAAA 6mer3-8 dme-miR-980-5p 3R - 9589494 9589572 3'utr bocksbeutel FlyBase G37406.1 AAGTCTTTAATTGCTTGTTCTCGCATATTGTTTCTTTTTATACATAATTAGAAAAATGTACTACATTATAATTATTGTA 117 9589516 0.901874706 8 114 824 0.994117647 2.227886705 0.047058824 0.35042735 0.552941176 117 1 0 169 3R:9589494-9589572 6 138 4888 FBgn0037719 379.4166667 31.98333333 49.09 0.363716231 4.314747264 2.81116317 -6 -6 -6 0.01 dme-miR-986-5p 6mer3-8 ATTCGA 3R 9633826 9633831 - 3R_9633826_9633831_- 1 1 1 0 Scm FBtr0082102|FBtr0306008 9633357|9633659 9634337|9634337 3R - 9633780 9633863 3'utr Scm FlyBase G49505.1 ATGTGAAATAGTTCTCAATTGGACACAAAATGATTCGACTTTTTCGAAAACTGGAGCTCGGCTACCAAAATCGCAATGCACATA 27 9633822 0.975357758 13 25 176 0.945945946 1.544068044 0.459459459 0.222222222 0.432432432 27 2 0 35 3R:9633780-9633863 6 Scm FBtr0082102|FBtr0306008 9633357|9633659 9634337|9634337 ATTCGA 6mer3-8 dme-miR-986-5p 3R - 9633799 9633863 3'utr Scm FlyBase G37428.1 ATGTGAAATAGTTCTCAATTGGACACAAAATGATTCGACTTTTTCGAAAACTGGAGCTCGGCTAC 17 9633821 0.671716618 12 17 111 1 1.397940009 0.16 0.294117647 0.52 17 0 0 25 3R:9633799-9633863 6 8.5 4889 FBgn0003334 1178.256667 35.08 53.90333333 0.007214048 0.242303307 0.157689691 -9 -10 -9.5 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 3R 9634290 9634295 - 3R_9634290_9634295_- 0.999061023 0.834278315 0.916669669 0.116518965 Scm FBtr0082102|FBtr0306008 9633357|9633659 9634337|9634337 3R - 9634210 9634324 3'utr Scm FlyBase G49507.1 AAGTTTCAGGCAGCGGACTCGGTTCGGGTTTGACTTATATAGAAATTGTTAACAAATTAGTACCTCCCTTTAACGTAAAGCAAAGCAAACATGAACGATATTCATAGATGTGTTA 30 9634295 0.98122841 12 27 195 0.909090909 1.477121255 0.181818182 0.1 0.181818182 30 3 0 30 3R:9634210-9634324 6 Scm FBtr0082102|FBtr0306008 9633357|9633659 9634337|9634337 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 9634244 9634317 3'utr Scm FlyBase G37430.1 AGGCAGCGGACTCGGTTCGGGTTTGACTTATATAGAAATTGTTAACAAATTAGTACCTCCCTTTAACGTAAAGC 14 9634295 0.98226369 6 11 86 0.9 1.255272505 0.4 0.428571429 0.6 14 2 0 18 3R:9634244-9634317 6 11 4890 FBgn0003334 1178.256667 35.08 53.90333333 0.009335827 0.313568985 0.204069012 0 0 0 0.01 dme-miR-988-3p 8mer-A1 ACAAGGGA 3R 9679519 9679526 + 3R_9679519_9679526_+ 0.61221408 0.61221408 0.61221408 0 CG16817 FBtr0082082 9679235 9679658 3R + 9679361 9679601 3'utr CG16817 FlyBase G41525.1 GAAACACTCAATCACTCATAAAACATCCACAAACGCATGCGTACATGAAACACTATTCCAATCGAAGAAAACCACATTTAATATACCTGAATATTATGCGTATTCAGAGGAGAGATGTTAACAAAAAGCAACACAAGGAACAAGATGATTTGGCGCCGACAAGGGAAACCATAAGTTTTACGCTAGAATTTAACAACCAGAGGAAAGCTACAACCAATTTATTGCAAAAATCAGTTTGCAG 59 9679509 0.958673122 23 57 273 0.97260274 1.550228353 0.109589041 0.203389831 0.356164384 59 1 1 71 3R:9679361-9679601 8 CG16817 FBtr0082082 9679235 9679658 ACAAGGGA 8mer-A1 dme-miR-988-3p 3R + 9679430 9679550 3'utr CG16817 FlyBase G31330.1 AACCACATTTAATATACCTGAATATTATGCGTATTCAGAGGAGAGATGTTAACAAAAAGCAACACAAGGAACAAGATGATTTGGCGCCGACAAGGGAAACCATAAGTTTTACGCTAGAATT 19 9679510 0.932621645 9 18 76 0.96875 1.491361694 0.3125 0.315789474 0.59375 19 1 0 31 3R:9679430-9679550 8 10.5 4891 FBgn0037728 4869.06 542.6233333 834.5833333 0.002156474 0.01935044 0.012581128 10 9 9.5 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 3R 9684472 9684478 - 3R_9684472_9684478_- 0.782911824 0.782911824 0.782911824 0 eca FBtr0082098 9684467 9684666 3R - 9684467 9684492 3'utr eca FlyBase G49522.1 TAATAAAATCCATTGTACAAAACGAG 25 9684480 0.623698592 3 25 87 1 1.591064607 0 0.44 0.641025641 25 0 0 39 3R:9684467-9684492 7 eca FBtr0082098 9684467 9684666 GTACAAA 7mer-A1 dme-miR-305-5p 3R - 9684468 9684498 3'utr eca FlyBase G37441.1 GTAATTTAATAAAATCCATTGTACAAAACGA 20 9684480 0.699485405 2 19 77 1 1.462397998 0.034482759 0.4 0.586206897 20 0 0 29 3R:9684468-9684498 7 22 4892 FBgn0069242 341.4133333 44.61 67.42 0.064438022 0.493162968 0.326312667 2 2 2 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3R 9684601 9684606 - 3R_9684601_9684606_- 1 1 1 0 eca FBtr0082098 9684467 9684666 3R - 9684503 9684635 3'utr eca FlyBase G49523.1 ACTGGCCAACCACTGGCCTCATTGTTCCGTGTGTTTCCCTCATTTGGCAGGAATTGCGAATTTCATCGATGGATCGTCATCCACCCAACCAGCCACTGGCCTCGACTCCAAGCACTTCTAGTTGTAATTTCTT 64 9684612 0.882363629 22 60 474 0.902777778 1.812913357 0.111111111 0.125 0.222222222 64 7 0 65 3R:9684503-9684635 6 eca FBtr0082098 9684467 9684666 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 9684581 9684633 3'utr eca FlyBase G37442.1 TGGCCAACCACTGGCCTCATTGTTCCGTGTGTTTCCCTCATTTGGCAGGAATT 21 9684611 0.777805302 9 20 178 0.966666667 1.462397998 0.166666667 0.380952381 0.566666667 21 1 0 29 3R:9684581-9684633 6 27.5 4893 FBgn0069242 341.4133333 44.61 67.42 0.080547528 0.61645371 0.407890834 6 5 5.5 0.01 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3R 9686729 9686734 + 3R_9686729_9686734_+ 0.822289035 0.999550539 0.910919787 0.125342809 CG18542 FBtr0082084 9686716 9687141 3R + 9686685 9686757 stop_codon CG18542 FlyBase G41532.1 ACCGACGGAGCAGCTTTGCACAAGCAAAACTAGTGCGTTACCAATGGTGCAATATAGATGATAGATAAATGGA 47 9686729 0.978039317 6 46 295 0.981132075 1.716003344 0.094339623 0.127659574 0.226415094 47 1 0 52 3R:9686685-9686757 6 CG18542 FBtr0082084 9686716 9687141 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3R + 9686716 9686771 stop_codon CG18542 FlyBase G31333.1 AGTGCGTTACCAATGGTGCAATATAGATGATAGATAAATGGATTCTGTGGAATCTT 16 9686729 0.976444182 2 16 112 1 1.447158031 0.178571429 0.4375 0.678571429 16 0 0 28 3R:9686716-9686771 6 28 4894 FBgn0037731 342.2866667 33.38666667 51.05666667 0.081802777 0.838658147 0.548410263 0 0 0 0.01 dme-miR-190-5p 6mer3-8 ACATAT 3R 9686816 9686821 + 3R_9686816_9686821_+ 1 1 1 0 CG18542 FBtr0082084 9686716 9687141 3R + 9686779 9686850 3'utr CG18542 FlyBase G41533.1 ATTTACGTATTTATTCTGTGAACTTTACATTCCAGTCACATATTGCGTCCCGAACTCAAATCACACCGAATT 84 9686808 0.797150919 13 82 510 0.981981982 1.736396502 0 0.238095238 0.423423423 84 1 1 109 3R:9686779-9686850 6 CG18542 FBtr0082084 9686716 9687141 ACATAT 6mer3-8 dme-miR-190-5p 3R + 9686784 9686842 3'utr CG18542 FlyBase G31334.1 CGTATTTATTCTGTGAACTTTACATTCCAGTCACATATTGCGTCCCGAACTCAAATCAC 54 9686808 0.76140962 8 51 343 0.974358974 1.880813592 0 0.333333333 0.538461538 54 2 0 76 3R:9686784-9686842 6 63.5 4895 FBgn0037731 342.2866667 33.38666667 51.05666667 0.185517013 1.901956869 1.243716132 8 8 8 0.01 dme-miR-184-3p 6mer3-8 TCCGTC 3R 9686987 9686992 + 3R_9686987_9686992_+ 1 1 1 0 CG18542 FBtr0082084 9686716 9687141 3R + 9686961 9687025 3'utr CG18542 FlyBase G41534.1 CGTTGTCGGCTCGACAAAGAGTAAATTCCGTCTAGGATTAAGAAGAAACTTTATAATCTCCACAC 15 9686986 0.97442006 3 15 90 1 1.278753601 0 0.266666667 0.421052632 15 0 0 19 3R:9686961-9687025 6 CG18542 FBtr0082084 9686716 9687141 TCCGTC 6mer3-8 dme-miR-184-3p 3R + 9686950 9687024 3'utr CG18542 FlyBase G31335.1 CAGACTTTAGCCGTTGTCGGCTCGACAAAGAGTAAATTCCGTCTAGGATTAAGAAGAAACTTTATAATCTCCACA 7 9686986 0.968589718 4 7 43 1 1.041392685 0 0.428571429 0.636363636 7 0 0 11 3R:9686950-9687024 6 9 4896 FBgn0037731 342.2866667 33.38666667 51.05666667 0.02629375 0.26956869 0.176274727 1 1 1 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 9687219 9687224 - 3R_9687219_9687224_- 1 1 1 0 Unc-115b FBtr0082097|FBtr0082095 9687058|9687058 9687461|9687461 3R - 9687202 9687235 3'utr Unc-115b FlyBase G49530.1 AAGAAATTAATGTACCTACAGCAGAATCACACAG 15 9687225 0.66700242 2 15 64 1 1.255272505 0.222222222 0.2 0.333333333 15 0 0 18 3R:9687202-9687235 6 Unc-115b FBtr0082095|FBtr0082097 9687058|9687058 9687461|9687461 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 9687207 9687235 3'utr Unc-115b FlyBase G37449.1 AAGAAATTAATGTACCTACAGCAGAATCA 14 9687225 0.854491423 2 14 57 1 1.230448921 0.058823529 0.214285714 0.352941176 14 0 0 17 3R:9687207-9687235 6 14.5 4897 FBgn0260463 1798.356667 71.09 107.6 0.008062917 0.203966803 0.134758364 1 1 1 0.01 dme-miR-190-5p 6mer3-8 ACATAT 3R 9694136 9694141 + 3R_9694136_9694141_+ 1 1 1 0 CG32939 FBtr0082085 9694036 9694461 3R + 9694100 9694204 3'utr CG32939 FlyBase G41538.1 TTTACGTATTTATTCTGTGAACTTTACATTCCAGTCACATATTGCGTCCCGAACTCAAATCACACCGAATTATGCCCTTGATGGCGTTTCTTTATCGATTCGACA 87 9694128 0.979524128 7 78 548 0.887850467 1.977723605 0 0.172413793 0.327102804 87 12 0 95 3R:9694100-9694204 6 CG32939 FBtr0082085 9694036 9694461 ACATAT 6mer3-8 dme-miR-190-5p 3R + 9694114 9694159 3'utr CG32939 FlyBase G31337.1 CTGTGAACTTTACATTCCAGTCACATATTGCGTCCCGAACTCAAAT 64 9694128 0.731084878 6 54 370 0.901098901 1.612783857 0 0.3125 0.516483516 64 8 1 82 3R:9694114-9694159 6 71.5 4898 FBgn0052939 2.536666667 0.266666667 0.413333333 28.18659658 268.125 172.983871 8 8 8 0.01 dme-miR-184-3p 6mer3-8 TCCGTC 3R 9694307 9694312 + 3R_9694307_9694312_+ 1 1 1 0 CG32939 FBtr0082085 9694036 9694461 3R + 9694264 9694343 3'utr CG32939 FlyBase G41539.1 TGTCGACAGACTTTAGCCGTTGTCGGCTCGACAAAGAGTAAATTCCGTCTAGGATTAAGAAGAAACTTTATAATCTCCAC 27 9694306 0.97581612 5 27 170 1 1.544068044 0.057142857 0.222222222 0.4 27 0 0 35 3R:9694264-9694343 6 CG32939 FBtr0082085 9694036 9694461 TCCGTC 6mer3-8 dme-miR-184-3p 3R + 9694263 9694344 3'utr CG32939 FlyBase G31338.1 ATGTCGACAGACTTTAGCCGTTGTCGGCTCGACAAAGAGTAAATTCCGTCTAGGATTAAGAAGAAACTTTATAATCTCCACA 12 9694306 0.972582411 4 12 72 1 1.204119983 0 0.333333333 0.5 12 0 0 16 3R:9694263-9694344 6 14 4899 FBgn0052939 2.536666667 0.266666667 0.413333333 5.519053876 52.5 33.87096774 1 1 1 0.01 dme-miR-965-3p 6mer2-7 ACGCTT 3R 9694912 9694917 - 3R_9694912_9694917_- 1 1 1 0 Unc-115a FBtr0300565|FBtr0346714|FBtr0300564|FBtr0339597|FBtr0344277|FBtr0082092|FBtr0344276|FBtr0344275 9694720|9694720|9694384|9694384|9694720|9694720|9694384|9694384 9695109|9695109|9695109|9695109|9695109|9695109|9695109|9695109 3R - 9694886 9695035 3'utr Unc-115a FlyBase G49548.1 AGAATTCAATTTACCTTAACAGCAGATGGCTATAACTCACGTGGCAGGAGATGAGAATCAATATATAAAATGAAAACGAAACGGGAAACTATGCTAATTTCACAGCCAGTTTTGAAACACGCTTTAAATAGTTGATGCAAGTGAAACCAA 42 9694937 0.97783211 19 41 270 0.980392157 1.698970004 0.117647059 0.214285714 0.352941176 42 1 0 50 3R:9694886-9695035 6 Unc-115a FBtr0344275|FBtr0344276|FBtr0082092|FBtr0344277|FBtr0339597|FBtr0300564|FBtr0346714|FBtr0300565 9694384|9694384|9694720|9694720|9694384|9694384|9694720|9694720 9695109|9695109|9695109|9695109|9695109|9695109|9695109|9695109 ACGCTT 6mer2-7 dme-miR-965-3p 3R - 9694906 9694955 3'utr Unc-115a FlyBase G37463.1 ACGGGAAACTATGCTAATTTCACAGCCAGTTTTGAAACACGCTTTAAATA 15 9694937 0.741051141 6 14 104 0.931034483 1.431363764 0.103448276 0.533333333 0.75862069 15 2 0 27 3R:9694906-9694955 6 7.5 4900 FBgn0051352 385.9966667 13.07333333 19.92 0.01943022 0.573686894 0.376506024 20 20 20 0.01 dme-miR-184-5p 8mer-m1 TGATAAGG 3R 9714167 9714174 + 3R_9714167_9714174_+ 0.614713882 0.614713882 0.614713882 0 dmt FBtr0082086 9714126 9714675 3R + 9714155 9714186 3'utr dmt FlyBase G41554.1 TTTTTGTGTCGCTGATAAGGGGAAGTAGTCGT 5 9714169 0.819876762 3 5 31 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 3R:9714155-9714186 8 dmt FBtr0082086 9714126 9714675 TGATAAGG 8mer-m1 dme-miR-184-5p 3R + 9714156 9714201 3'utr dmt FlyBase G31351.1 TTTTGTGTCGCTGATAAGGGGAAGTAGTCGTTTTTAATTTAATGTG 9 9714180 0.796017454 5 9 71 1 1.113943352 0.307692308 0.333333333 0.538461538 9 0 0 13 3R:9714156-9714201 8 6.5 4901 FBgn0016792 1049.153333 39.87 61.16 0.006195472 0.163029847 0.106278613 -2 -13 -7.5 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG 3R 9742021 9742026 + 3R_9742021_9742026_+ 1 1 1 0 Pnn FBtr0082126 9741975 9742156 3R + 9741993 9742051 3'utr Pnn FlyBase G41561.1 GGGCTTGAAATATGATCGTGCGGATATCGCTGTGTAGGGCAATTGGGTTTCAATTTATA 11 9742023 0.980493779 6 10 70 0.933333333 1.146128036 0.266666667 0.272727273 0.466666667 11 1 0 14 3R:9741993-9742051 6 Pnn FBtr0082126 9741975 9742156 GCTGTG 6mer2-7 dme-miR-1008-3p 3R + 9741982 9742040 3'utr Pnn FlyBase G31358.1 AGTTTGCACTAGGGCTTGAAATATGATCGTGCGGATATCGCTGTGTAGGGCAATTGGGT 17 9742027 0.963697146 7 17 94 1 1.397940009 0.2 0.352941176 0.56 17 0 0 25 3R:9741982-9742040 6 9.5 4902 FBgn0037737 459.6666667 41.47666667 63.47666667 0.02066715 0.229044443 0.149661293 -2 -6 -4 0.01 dme-miR-970-3p 6mer2-7 CTTATG 3R 9750490 9750495 + 3R_9750490_9750495_+ 1 1 1 0 PpD3 FBtr0331693|FBtr0082129|FBtr0082128 9750343|9750343|9750343 9751094|9751094|9751094 3R + 9750398 9750513 3'utr PpD3 FlyBase G41579.1 AATTTACAAACAGCTTGAGAACTTACAATCGCAAGACAGCCCAGCTTACAATGATCAAAGGAGAGGAAAAGGATTCGAAGATGCTCAATAGACTTATGCACACCGCGAGCTGCTTC 128 9750486 0.943557167 12 124 602 0.980519481 1.877946952 0.305194805 0.1796875 0.318181818 128 2 1 151 3R:9750398-9750513 6 PpD3 FBtr0331693|FBtr0082129|FBtr0082128 9750343|9750343|9750343 9751094|9751094|9751094 CTTATG 6mer2-7 dme-miR-970-3p 3R + 9750430 9750564 3'utr PpD3 FlyBase G31373.1 AAGACAGCCCAGCTTACAATGATCAAAGGAGAGGAAAAGGATTCGAAGATGCTCAATAGACTTATGCACACCGCGAGCTGCTTCACTACTTAAGTACGAGTATGGCGAGTCCATAAGGCGTAGGACGAGTGGAGG 82 9750486 0.947402246 15 77 348 0.927927928 1.711807229 0.396396396 0.292682927 0.477477477 82 7 1 103 3R:9750430-9750564 6 65.5 4903 FBgn0005777 1338.646667 67.42 103.0166667 0.048930014 0.971521804 0.635819447 4 4 4 0.01 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3R 9754786 9754792 - 3R_9754786_9754792_- 0.620204031 0.620204031 0.620204031 0 Rpt3R FBtr0332172|FBtr0301536 9754733|9754733 9754897|9754897 3R - 9754770 9754813 3'utr Rpt3R FlyBase G49636.1 TCGAAATATATTAGTCAATACTGGTGCTTTAAATAAAAGAAAAT 11 9754785 0.850362932 4 11 87 1 1.079181246 0 0.090909091 0.166666667 11 0 0 12 3R:9754770-9754813 7 Rpt3R FBtr0301536|FBtr0332172 9754733|9754733 9754897|9754897 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3R - 9754771 9754802 3'utr Rpt3R FlyBase G37533.1 TAGTCAATACTGGTGCTTTAAATAAAAGAAAA 11 9754785 0.70010988 4 11 78 1 1.230448921 0.117647059 0.454545455 0.647058824 11 0 0 17 3R:9754771-9754802 7 11 4904 FBgn0037742 43.66666667 3.773333333 5.77 0.251908397 2.915194346 1.906412478 -7 -7 -7 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 3R 9761834 9761840 - 3R_9761834_9761840_- 0.782911824 0.782911824 0.782911824 0 Snap24 FBtr0082163 9761303 9762210 3R - 9761810 9761858 3'utr Snap24 FlyBase G49643.1 TACTATTACTACACTCGTGTACAAATGGCAACCAGATGGCGCCGGAAAC 26 9761833 0.948163519 6 23 100 0.918918919 1.230448921 0 0.32 0.540540541 25 2 1 34 3R:9761810-9761858 7 Snap24 FBtr0082163 9761303 9762210 GTACAAA 7mer-A1 dme-miR-305-5p 3R - 9761811 9761852 3'utr Snap24 FlyBase G37539.1 TACTACACTCGTGTACAAATGGCAACCAGATGGCGCCGGAAA 19 9761833 0.931244553 4 17 69 0.793103448 1.361727836 0 0.315789474 0.551724138 19 6 0 23 3R:9761811-9761852 7 20.5 4905 FBgn0266720 491.6633333 32.04666667 48.65666667 0.041695198 0.639692116 0.421319449 -7 -7 -7 0.01 dme-miR-307a-3p 6mer2-7 GTTGTG 3R 9762116 9762121 - 3R_9762116_9762121_- 1 1 1 0 Snap24 FBtr0082163 9761303 9762210 3R - 9762029 9762177 3'utr Snap24 FlyBase G49645.1 GAACATGTTAGTCAGACACCACCTCCATTTCAATGTTGTTAGGGAAAGAAACCAATGTTGTGGGCACAAACCGTAGCTGGTGGTATTGCGTTATTGATACCATATATTATACACATATACAAGTAGTGGCAACTACTCCTGGCAAACGC 21 9762120 0.97396727 16 21 126 1 1.397940009 0.28 0.095238095 0.24 21 0 0 25 3R:9762029-9762177 6 Snap24 FBtr0082163 9761303 9762210 GTTGTG 6mer2-7 dme-miR-307a-3p 3R - 9762076 9762164 3'utr Snap24 FlyBase G37541.1 AGACACCACCTCCATTTCAATGTTGTTAGGGAAAGAAACCAATGTTGTGGGCACAAACCGTAGCTGGTGGTATTGCGTTATTGATACCA 10 9762096 0.984097482 8 8 56 0.736842105 1.146128036 0 0.4 0.684210526 10 5 0 14 3R:9762076-9762164 6 5.5 4906 FBgn0266720 491.6633333 32.04666667 48.65666667 0.011186517 0.171624714 0.113036925 -1 -25 -13 0.01 dme-miR-1008-3p 7mer-m8 AGCTGTG 3R 9765892 9765898 + 3R_9765892_9765898_+ 0.671748636 0.671795832 0.671772234 3.34E-05 CG8478 FBtr0301870|FBtr0301871|FBtr0332171|FBtr0082133 9765837|9765837|9765837|9765837 9766135|9766135|9766135|9766135 3R + 9765843 9765916 3'utr CG8478 FlyBase G41599.1 AGCGATTCGTGTGTAGCCTAGTCTATGTCTAAGTTAAGTGCTGTGGCGTAGCTGTGGTCCGGTAACGGCGCGTT 15 9765884 0.928174759 9 11 112 0.611111111 0.740362689 0.222222222 0.133333333 0.277777778 15 6 1 11 3R:9765843-9765916 7 CG8478 FBtr0332171|FBtr0082133|FBtr0301870|FBtr0301871 9765837|9765837|9765837|9765837 9766135|9766135|9766135|9766135 AGCTGTG 7mer-m8 dme-miR-1008-3p 3R + 9765873 9765912 3'utr CG8478 FlyBase G31382.1 AAGTTAAGTGCTGTGGCGTAGCTGTGGTCCGGTAACGGCG 9 9765885 0.581625969 6 9 60 1 1.146128036 0.285714286 0.444444444 0.642857143 9 0 0 14 3R:9765873-9765912 7 8.5 4907 FBgn0037746 785.14 44.18333333 67.65666667 0.010826095 0.192380234 0.12563433 8 7 7.5 0.01 dme-miR-1006-3p 6mer2-7 GAATTT 3R 9766043 9766048 + 3R_9766043_9766048_+ 1 1 1 0 CG8478 FBtr0301870|FBtr0301871|FBtr0332171|FBtr0082133 9765837|9765837|9765837|9765837 9766135|9766135|9766135|9766135 3R + 9766007 9766075 3'utr CG8478 FlyBase G41600.1 ATTGTACACTTCAGCTGCACGACTGGACTGCTTTGTGAATTTTTTAGGTTTTCGTATGACATTCACACA 25 9766046 0.790926277 10 24 204 0.962962963 1.414973348 0.111111111 0.08 0.148148148 25 1 0 26 3R:9766007-9766075 6 CG8478 FBtr0332171|FBtr0082133|FBtr0301870|FBtr0301871 9765837|9765837|9765837|9765837 9766135|9766135|9766135|9766135 GAATTT 6mer2-7 dme-miR-1006-3p 3R + 9765987 9766062 3'utr CG8478 FlyBase G31383.1 GGTTACTCGAATGCTTATTAATTGTACACTTCAGCTGCACGACTGGACTGCTTTGTGAATTTTTTAGGTTTTCGTA 16 9766038 0.98730842 8 15 143 1 1.380211242 0.208333333 0.375 0.583333333 16 0 0 24 3R:9765987-9766062 6 11 4908 FBgn0037746 785.14 44.18333333 67.65666667 0.01401024 0.248962656 0.162585604 -3 5 1 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 9766376 9766382 - 3R_9766376_9766382_- 0.658999527 0.658999527 0.658999527 0 MED6 FBtr0301873|FBtr0339719|FBtr0082161|FBtr0082162|FBtr0301872 9766029|9766029|9766029|9766029|9766029 9766440|9766440|9766440|9766440|9766440 3R - 9766349 9766399 3'utr MED6 FlyBase G49653.1 ATTAGTCCGAGTCCTTTGGCAGCTGCATAAAAGGCGCTGAATGCTGCCTGC 41 9766383 0.974589705 4 40 246 0.97826087 1.653212514 0.239130435 0.12195122 0.217391304 41 1 0 45 3R:9766349-9766399 7 MED6 FBtr0339719|FBtr0082161|FBtr0082162|FBtr0301872|FBtr0301873 9766029|9766029|9766029|9766029|9766029 9766440|9766440|9766440|9766440|9766440 GGCAGCT 7mer-m8 dme-miR-980-3p 3R - 9766345 9766399 3'utr MED6 FlyBase G37544.1 ATTAGTCCGAGTCCTTTGGCAGCTGCATAAAAGGCGCTGAATGCTGCCTGCATTT 37 9766384 0.972933767 5 36 218 0.981132075 1.716003344 0.188679245 0.324324324 0.528301887 37 1 0 52 3R:9766345-9766399 7 38 4909 FBgn0024330 320.2133333 23.55 36.04333333 0.118670886 1.61358811 1.054286507 1 2 1.5 0.01 dme-miR-33-5p 6mer2-7 AATGCA 3R 9766428 9766433 - 3R_9766428_9766433_- 1 1 1 0 MED6 FBtr0301873|FBtr0339719|FBtr0082161|FBtr0082162|FBtr0301872 9766029|9766029|9766029|9766029|9766029 9766440|9766440|9766440|9766440|9766440 3R - 9766415 9766455 stop_codon MED6 FlyBase G49654.1 AAGAAGAGCAAGTGATTATGTGAATGCAGGTGCACCCTCAA 10 9766439 0.936695274 5 9 51 0.916666667 0.740362689 0.333333333 0.1 0.25 10 0 1 11 3R:9766415-9766455 6 MED6 FBtr0339719|FBtr0082161|FBtr0082162|FBtr0301872|FBtr0301873 9766029|9766029|9766029|9766029|9766029 9766440|9766440|9766440|9766440|9766440 AATGCA 6mer2-7 dme-miR-33-5p 3R - 9766414 9766450 stop_codon MED6 FlyBase G37545.1 GAGCAAGTGATTATGTGAATGCAGGTGCACCCTCAAA 6 9766439 0.702444055 3 6 39 1 1 0.2 0.5 0.7 6 0 0 10 3R:9766414-9766450 6 7 4910 FBgn0024330 320.2133333 23.55 36.04333333 0.021860426 0.297239915 0.194210672 6 6 6 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3R 9769498 9769504 + 3R_9769498_9769504_+ 0.823349562 0.823349562 0.823349562 0 CG8481 FBtr0100583|FBtr0082134 9769425|9769425 9770027|9770027 3R + 9769431 9769619 3'utr CG8481 FlyBase G41603.1 CAACGCCAGTAGTAGTGGGCTTGGCTAAATTGGGCCATACCCAGCCCGATCAGAGAGTGGCAGTGAACTAGTCAAATTGGCAAATGCTTGAAATTCTTTACGGGTTTTACCTGCCAGCAGCTGCTTCGAGCCATAACCTGTGGATGCCAGGCAGTCTGCCAAGTGCATGTGTGATTGCCTCGTTGCTCT 113 9769489 0.964284717 22 102 534 0.929078014 1.8162413 0.120567376 0.203539823 0.361702128 113 9 1 131 3R:9769431-9769619 7 CG8481 FBtr0100583|FBtr0082134 9769425|9769425 9770027|9770027 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 9769429 9769559 3'utr CG8481 FlyBase G31387.1 GTCAACGCCAGTAGTAGTGGGCTTGGCTAAATTGGGCCATACCCAGCCCGATCAGAGAGTGGCAGTGAACTAGTCAAATTGGCAAATGCTTGAAATTCTTTACGGGTTTTACCTGCCAGCAGCTGCTTCGA 113 9769490 0.959591984 13 107 496 0.95212766 2.252853031 0.138297872 0.451327434 0.670212766 113 9 0 179 3R:9769429-9769559 7 93 4911 FBgn0037747 197.4366667 16.77 25.65666667 0.471037126 5.545617174 3.624788879 9 8 8.5 0.01 dme-miR-999-3p 6mer2-7 GTTAAC 3R 9769799 9769804 + 3R_9769799_9769804_+ 1 1 1 0 CG8481 FBtr0100583|FBtr0082134 9769425|9769425 9770027|9770027 3R + 9769642 9769833 3'utr CG8481 FlyBase G41604.1 AAGCTTTTGATTCCATTACACCGATAAGCAACCATTCATTCACCAAGCGCTTGTGTTGATTTTTAAATATTACTTTCCGCATGTATTTTTTAAACTTTTTGGTTCTTTTTGTATGACAAAAGTGATCCGGGCTGTTCGGTACATCTATAAGGCTAATGTTAACCTAATCCTAACTGTTTAGCAATTATGATT 115 9769789 0.833616163 26 110 893 0.960629921 1.609238576 0.11023622 0.095652174 0.181102362 115 3 2 122 3R:9769642-9769833 6 CG8481 FBtr0100583|FBtr0082134 9769425|9769425 9770027|9770027 GTTAAC 6mer2-7 dme-miR-999-3p 3R + 9769741 9769809 3'utr CG8481 FlyBase G31389.1 TGGTTCTTTTTGTATGACAAAAGTGATCCGGGCTGTTCGGTACATCTATAAGGCTAATGTTAACCTAAT 55 9769789 0.971449219 11 51 351 0.917808219 1.826074803 0.191780822 0.290909091 0.465753425 55 6 0 67 3R:9769741-9769809 6 41 4912 FBgn0037747 197.4366667 16.77 25.65666667 0.207661529 2.44484198 1.598025205 10 10 10 0.01 dme-miR-190-5p 7mer-m8 ACATATC 3R 9769961 9769967 + 3R_9769961_9769967_+ 0.674514898 0.674514898 0.674514898 0 CG8481 FBtr0100583|FBtr0082134 9769425|9769425 9770027|9770027 3R + 9769910 9769985 3'utr CG8481 FlyBase G41606.1 GATTATGATAATAAGAAGCTCAAGTATCTTCCAACGAAACATAGCAAATAGACATATCGAGCCTTAGCATTAAGCA 10 9769973 0.963559374 4 9 51 0.916666667 1.041392685 0.083333333 0.2 0.333333333 10 1 0 11 3R:9769910-9769985 7 CG8481 FBtr0100583|FBtr0082134 9769425|9769425 9770027|9770027 ACATATC 7mer-m8 dme-miR-190-5p 3R + 9769955 9769987 3'utr CG8481 FlyBase G31390.1 AAATAGACATATCGAGCCTTAGCATTAAGCACT 11 9769973 0.828194823 2 11 61 1 1.230448921 0 0.454545455 0.647058824 11 0 0 17 3R:9769955-9769987 7 9 4913 FBgn0037747 197.4366667 16.77 25.65666667 0.045584238 0.53667263 0.350786021 -12 -12 -12 0.01 dme-miR-33-5p 6mer2-7 AATGCA 3R 9778827 9778832 + 3R_9778827_9778832_+ 1 1 1 0 RpS29 FBtr0334681 9778784 9779528 3R + 9778786 9778896 3'utr RpS29 FlyBase G41610.1 ATGTGTCCTCTTCGCATTTTAACGCGGTAATCGCGTATATTAATGCATATTAATGTATGGAGTCGTCGGATGTCGGGGACTCGGTAAATTAGTATGCCGGCAGCAACAGCA 39 9778829 0.862691846 18 31 248 0.825 1.217483944 0.45 0.052631579 0.1 38 6 1 33 3R:9778786-9778896 6 RpS29 FBtr0334681|FBtr0082136 9778784|9778784 9779528|9779078 AATGCA 6mer2-7 dme-miR-33-5p 3R + 9778787 9778928 3'utr RpS29 FlyBase G31395.1 TGTGTCCTCTTCGCATTTTAACGCGGTAATCGCGTATATTAATGCATATTAATGTATGGAGTCGTCGGATGTCGGGGACTCGGTAAATTAGTATGCCGGCAGCAACAGCAACAACAATAATCATTTGGGGATTTAAGCAAGG 35 9778829 0.954124137 19 31 255 0.88 1.643452676 0.38 0.257142857 0.48 35 6 0 44 3R:9778787-9778928 6 10 4914 FBgn0261599 23525.90667 6343.63 9678.496667 0.000425063 0.001576384 0.001033218 -2 -2 -2 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 9779385 9779391 + 3R_9779385_9779391_+ 0.754178804 0.754178393 0.754178598 2.83E-07 RpS29 FBtr0334681|FBtr0334681|FBtr0334681 9778784|9778784|9778784 9779528|9779528|9779528 3R + 9779349 9779428 3'utr RpS29 FlyBase G41613.1 CACCAGTTGCATAAAGGCTTTTGATGCGGACTTTGATGTGATATGCAAAACTGGCAGGCCACTGAACCCATTTTTTATAT 31 9779369 0.979946844 11 31 217 1 1.544068044 0.257142857 0.129032258 0.228571429 31 0 0 35 3R:9779349-9779428 7 RpS29 FBtr0334681|FBtr0334681|FBtr0334681 9778784|9778784|9778784 9779528|9779528|9779528 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 9779353 9779398 3'utr RpS29 FlyBase G31401.1 AGTTGCATAAAGGCTTTTGATGCGGACTTTGATGTGATATGCAAAA 21 9779382 0.937852622 9 20 150 0.911764706 1.491361694 0.088235294 0.333333333 0.588235294 21 3 0 31 3R:9779353-9779398 7 17 4915 FBgn0261599 23525.90667 6343.63 9678.496667 0.000722608 0.002679854 0.001756471 16 3 9.5 0.01 dme-miR-304-5p 6mer3-8 TGAGAT 3R 9783572 9783577 - 3R_9783572_9783577_- 1 1 1 0 MtnA FBtr0334686 9783405 9783858 3R - 9783495 9783579 3'utr MtnA FlyBase G49662.1 TCTGAGATGCCTCACTTCTGAAGCGACTGAGGGATTGAGTTTCAAAGCACAGCGGCTTGAACTCATGACTTGTAGATAAAAATAC 21 9783561 0.770875911 9 20 99 0.961538462 1.096910013 0.192307692 0.238095238 0.384615385 21 0 1 25 3R:9783495-9783579 6 MtnA FBtr0334686 9783405 9783858 TGAGAT 6mer3-8 dme-miR-304-5p 3R - 9783451 9783575 3'utr MtnA FlyBase G37550.1 AGATGCCTCACTTCTGAAGCGACTGAGGGATTGAGTTTCAAAGCACAGCGGCTTGAACTCATGACTTGTAGATAAAAATACAGTTGCGGGCGTTAGAATATAGCCGCTATCGAATGGATAATATT 20 9783548 0.969667989 13 19 110 0.870967742 1.431363764 0.290322581 0.35 0.580645161 20 4 0 27 3R:9783451-9783575 4 5.5 4916 FBgn0002868 684.99 284.0066667 426.33 0.008029314 0.019365743 0.012900805 -16 -29 -22.5 0.01 dme-miR-282-5p 6mer3-8 AGAGGC 3R 9783827 9783832 - 3R_9783827_9783832_- 1 1 1 0 MtnA FBtr0334686 9783405 9783858 3R - 9783774 9783861 stop_codon MtnA FlyBase G49663.1 TGAGCTTTCCCCCAAAAAAGATCTGGAGTAGAGGCGCTGCATCTTGTCTCTCTACACACCCTGCAATAAATGTCCAATTAAAGTAATT 39 9783855 0.723290385 11 35 225 0.875 1.62324929 0.208333333 0.179487179 0.333333333 39 6 0 42 3R:9783774-9783861 6 MtnA FBtr0334686 9783405 9783858 AGAGGC 6mer3-8 dme-miR-282-5p 3R - 9783776 9783885 stop_codon MtnA FlyBase G37551.1 AAATCCGCCTGCGGCTGCTCCGAGTGAGCTTTCCCCCAAAAAAGATCTGGAGTAGAGGCGCTGCATCTTGTCTCTCTACACACCCTGCAATAAATGTCCAATTAAAGTAA 38 9783834 0.919425703 15 37 194 0.979166667 1.672097858 0.1875 0.263157895 0.416666667 38 1 0 47 3R:9783776-9783885 6 21 4917 FBgn0002868 684.99 284.0066667 426.33 0.030657382 0.073941926 0.049257617 23 2 12.5 0.01 dme-miR-12-5p 7mer-m8 AATACTC 3R 9786958 9786964 + 3R_9786958_9786964_+ 0.67451515 0.67451515 0.67451515 0 CG8500 FBtr0082139 9786856 9789323 3R + 9786921 9786982 3'utr CG8500 FlyBase G41618.1 GTCGAGCTGAAGTGAACGGAGACGACGGTGACAGACAAATACTCGCCTTGGGGCAGCACCCT 17 9786960 0.910717331 3 17 58 1 1.255272505 0.166666667 0.058823529 0.111111111 17 0 0 18 3R:9786921-9786982 7 CG8500 FBtr0082139 9786856 9789323 AATACTC 7mer-m8 dme-miR-12-5p 3R + 9786942 9786977 3'utr CG8500 FlyBase G31408.1 ACGACGGTGACAGACAAATACTCGCCTTGGGGCAGC 6 9786968 0.612596804 3 6 21 1 0.954242509 0 0.166666667 0.444444444 6 0 0 9 3R:9786942-9786977 7 10.5 4918 FBgn0037754 1099.76 38.82 59.79333333 0.009547538 0.270479134 0.175604861 -2 -10 -6 0.01 dme-miR-184-5p 6mer2-7 GATAAG 3R 9787154 9787159 + 3R_9787154_9787159_+ 0.897663819 1 0.94883191 0.072362621 CG8500 FBtr0082139 9786856 9789323 3R + 9787106 9787184 3'utr CG8500 FlyBase G41619.1 ATATAGAGTTACATGCATAACGAGACACTTGTATTTAGGAACTGACTGGATAAGTCGCACCACGATTGCAATTACGATT 16 9787135 0.969733026 7 16 96 1 1.255272505 0.055555556 0.125 0.222222222 16 0 0 18 3R:9787106-9787184 6 CG8500 FBtr0082139 9786856 9789323 GATAAG 6mer2-7 dme-miR-184-5p 3R + 9787119 9787168 3'utr CG8500 FlyBase G31409.1 TGCATAACGAGACACTTGTATTTAGGAACTGACTGGATAAGTCGCACCAC 9 9787135 0.967648483 5 8 46 1 1.041392685 0.363636364 0.222222222 0.363636364 9 0 0 11 3R:9787119-9787168 6 9 4919 FBgn0037754 1099.76 38.82 59.79333333 0.008183604 0.231839258 0.150518452 19 19 19 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3R 9787236 9787242 + 3R_9787236_9787242_+ 0.661615511 0.661615511 0.661615511 0 CG8500 FBtr0082139 9786856 9789323 3R + 9787207 9787272 3'utr CG8500 FlyBase G41620.1 ATATATTCTATTCGAGCCGATCAGATCTTTCTAGTCGCACAGAGACACGATACCACGTACTGCATA 187 9787235 0.756873768 10 185 1090 0.990950226 2.340444115 0.366515837 0.14973262 0.280542986 187 2 0 219 3R:9787207-9787272 7 CG8500 FBtr0082139 9786856 9789323 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 9787202 9787269 3'utr CG8500 FlyBase G31410.1 AGGTTATATATTCTATTCGAGCCGATCAGATCTTTCTAGTCGCACAGAGACACGATACCACGTACTGC 126 9787235 0.677542435 6 118 728 0.91959799 1.961421094 0.361809045 0.388888889 0.613065327 126 15 1 183 3R:9787202-9787269 7 147 4920 FBgn0037754 1099.76 38.82 59.79333333 0.133665527 3.786707883 2.458468057 1 1 1 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3R 9787549 9787554 + 3R_9787549_9787554_+ 1 1 1 0 CG8500 FBtr0082139 9786856 9789323 3R + 9787527 9787589 3'utr CG8500 FlyBase G41622.1 ATTTACATGGATCCATCAACGTAAGACTTCTCCGTGATCGCCACATAGAGAGCATCGCGAGGC 7 9787548 0.988960898 3 6 50 0.857142857 0.77815125 0.428571429 0 0 7 1 0 6 3R:9787527-9787589 6 CG8500 FBtr0082139 9786856 9789323 AAGACT 6mer3-8 dme-miR-14-3p 3R + 9787441 9787577 3'utr CG8500 FlyBase G31413.1 AAGCTATACACTAATATCTCTAATGAAAGCCAAAGTACCTACTTAAAGACATAGAATCTGTATCTACTACGATATGATAACAAAATATTTACATGGATCCATCAACGTAAGACTTCTCCGTGATCGCCACATAGAGA 22 9787548 0.970762601 14 20 123 0.970588235 1.51851394 0.147058824 0.363636364 0.588235294 22 1 0 33 3R:9787441-9787577 6 7 4921 FBgn0037754 1099.76 38.82 59.79333333 0.006365025 0.180319423 0.117069907 1 1 1 0.01 dme-miR-1012-3p 6mer2-7 TGACTA 3R 9787642 9787647 + 3R_9787642_9787647_+ 1 1 1 0 CG8500 FBtr0082139 9786856 9789323 3R + 9787622 9787663 3'utr CG8500 FlyBase G41623.1 AAATGGCCGATGCCTCCCCCTGACTATCATTGCTGTTTAACT 8 9787652 0.876959922 4 8 68 1 1.041392685 0 0.25 0.454545455 8 0 0 11 3R:9787622-9787663 6 CG8500 FBtr0082139 9786856 9789323 TGACTA 6mer2-7 dme-miR-1012-3p 3R + 9787626 9787662 3'utr CG8500 FlyBase G31414.1 GGCCGATGCCTCCCCCTGACTATCATTGCTGTTTAAC 6 9787650 0.65451545 5 6 48 1 0.77815125 0 0 0 6 0 0 6 3R:9787626-9787662 6 7 4922 FBgn0037754 1099.76 38.82 59.79333333 0.006365025 0.180319423 0.117069907 -10 -8 -9 0.01 dme-miR-980-3p 6mer2-7 GCAGCT 3R 9787871 9787876 + 3R_9787871_9787876_+ 1 1 1 0 CG8500 FBtr0082139 9786856 9789323 3R + 9787827 9787905 3'utr CG8500 FlyBase G41624.1 AATATGTATGTACAATTTTACACTTATTTGCTGAACTTTATTGAGCAGCTTGAACTTTCTCAGTAGTAGCCAGATCGAT 15 9787867 0.98823545 8 14 120 0.882352941 1.176091259 0.235294118 0.133333333 0.235294118 15 2 0 15 3R:9787827-9787905 6 CG8500 FBtr0082139 9786856 9789323 GCAGCT 6mer2-7 dme-miR-980-3p 3R + 9787852 9787882 3'utr CG8500 FlyBase G31415.1 ATTTGCTGAACTTTATTGAGCAGCTTGAACT 8 9787867 0.770603678 4 8 60 1 1.079181246 0 0.375 0.583333333 8 0 0 12 3R:9787852-9787882 6 9.5 4923 FBgn0037754 1099.76 38.82 59.79333333 0.008638248 0.244719217 0.158880589 4 4 4 0.01 dme-miR-283-5p 8mer-A1 TGATATTA 3R 9788236 9788243 + 3R_9788236_9788243_+ 0.592192292 0.592192292 0.592192292 0 CG8500 FBtr0082139 9786856 9789323 3R + 9788207 9788337 3'utr CG8500 FlyBase G41626.1 CAAATTGTTTCGCATAGTTTGCTGTTGTTTGATATTAAGAGGATAAGTTTTTTTAAATTTTACCAATCGGACTAAGTGAATGATATGCTTTAAACGCTGCTATACCAATTAGCCAAATAGAGGGGCATGTA 19 9788234 0.991101359 15 19 193 1 1.322219295 0.380952381 0.105263158 0.19047619 19 0 0 21 3R:9788207-9788337 8 CG8500 FBtr0082139 9786856 9789323 TGATATTA 8mer-A1 dme-miR-283-5p 3R + 9788216 9788248 3'utr CG8500 FlyBase G31416.1 TCGCATAGTTTGCTGTTGTTTGATATTAAGAGG 7 9788234 0.637901778 5 7 69 1 0.954242509 0.555555556 0.285714286 0.444444444 7 0 0 9 3R:9788216-9788248 8 9 4924 FBgn0037754 1099.76 38.82 59.79333333 0.008183604 0.231839258 0.150518452 2 2 2 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 9788637 9788642 + 3R_9788637_9788642_+ 1 1 1 0 CG8500 FBtr0082139 9786856 9789323 3R + 9788609 9788675 3'utr CG8500 FlyBase G41627.1 CGACGATATGCCAGCCTTAGTTGAGAATTCTAGTTAGCCTGCCTGTGCTTTGGGTTCTGCTTGGTGT 11 9788642 0.98925045 7 10 91 1 1.041392685 0.363636364 0 0 11 0 0 11 3R:9788609-9788675 6 CG8500 FBtr0082139 9786856 9789323 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 9788603 9788669 3'utr CG8500 FlyBase G31419.1 CGATTACGACGATATGCCAGCCTTAGTTGAGAATTCTAGTTAGCCTGCCTGTGCTTTGGGTTCTGCT 10 9788658 0.985720566 7 10 82 1 1.230448921 0.352941176 0.5 0.705882353 10 0 0 17 3R:9788603-9788669 6 6.5 4925 FBgn0037754 1099.76 38.82 59.79333333 0.00591038 0.167439464 0.108707771 -5 -21 -13 0.01 dme-miR-1003-3p 6mer2-7 TGTGAG 3R 9789053 9789058 - 3R_9789053_9789058_- 1 1 1 0 CG12945 FBtr0113214|FBtr0334685 9788850|9788850 9789429|9789429 3R - 9788984 9789150 3'utr CG12945 FlyBase G49668.1 AATTTTTATATGTAACTTGTTGATCATTTATATTTACAACTTGGCGCTCAGGCGATTATTAATAATAATATTATTAGCAGTGGGCGCTCATTTGTGAGTTGCGTATTAATTGAATGTAAGCGATAATTAAATATTCGGTTTTCGAATCTTGTAAAATCTAATTTAAT 26 9789052 0.987303378 13 26 236 1 1.447158031 0.392857143 0.076923077 0.142857143 26 0 0 28 3R:9788984-9789150 6 CG12945 FBtr0334685|FBtr0113214 9788850|9788850 9789429|9789429 TGTGAG 6mer2-7 dme-miR-1003-3p 3R - 9789023 9789076 3'utr CG12945 FlyBase G37554.1 TAGCAGTGGGCGCTCATTTGTGAGTTGCGTATTAATTGAATGTAAGCGATAATT 10 9789052 0.912623744 5 10 78 1 1.146128036 0.5 0.4 0.571428571 10 0 0 14 3R:9789023-9789076 6 12 4926 FBgn0037755 425.2633333 24.99 38.05666667 0.02821781 0.480192077 0.315319261 -6 -6 -6 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 9789276 9789283 - 3R_9789276_9789283_- 0.500120318 0.500120318 0.500120318 0 CG12945 FBtr0113214|FBtr0334685 9788850|9788850 9789429|9789429 3R - 9789239 9789309 3'utr CG12945 FlyBase G49669.1 AAATTTTTATTTAAATTATTTTGCATGTACTTAATCTCATTTGCGCGATAAGTGTTATTAAGATAAATCTT 133 9789284 0.743506749 15 127 1299 0.968152866 2.181843588 0.038216561 0.135338346 0.267515924 133 5 0 152 3R:9789239-9789309 8 CG12945 FBtr0334685|FBtr0113214 9788850|9788850 9789429|9789429 GTACTTAA 8mer-A1 dme-miR-252-5p 3R - 9789241 9789307 3'utr CG12945 FlyBase G37556.2 ATTTTTATTTAAATTATTTTGCATGTACTTAATCTCATTTGCGCGATAAGTGTTATTAAGATAAATC 85 9789284 0.738066613 12 82 763 0.9609375 1.788875116 0.09375 0.364705882 0.578125 85 4 1 123 3R:9789241-9789307 8 100 4927 FBgn0037755 425.2633333 24.99 38.05666667 0.235148418 4.00160064 2.627660506 1 1 1 0.01 dme-miR-305-5p 7mer-A1 GTACAAA 3R 9797271 9797277 + 3R_9797271_9797277_+ 0.782872412 0.782909087 0.78289075 2.60E-05 CG8516 FBtr0082141 9797002 9797754 3R + 9797239 9797339 3'utr CG8516 FlyBase G41640.1 TAGAATATAGCATAGCTTTAGGTTGAATTTGTGTACAAACTATTTGTATGAACGGCTCGACAATTGCTTCCGGGCGAGGGTGGGTAATCGCTCCAAGTATC 72 9797267 0.783196837 10 69 642 0.989010989 1.954242509 0.197802198 0.236111111 0.395604396 72 1 0 90 3R:9797239-9797339 7 CG8516 FBtr0082141 9797002 9797754 GTACAAA 7mer-A1 dme-miR-305-5p 3R + 9797231 9797326 3'utr CG8516 FlyBase G31430.1 TTGCCCTTTAGAATATAGCATAGCTTTAGGTTGAATTTGTGTACAAACTATTTGTATGAACGGCTCGACAATTGCTTCCGGGCGAGGGTGGGTAAT 45 9797267 0.794954015 9 40 361 0.942028986 1.812913357 0.202898551 0.4 0.608695652 45 4 0 65 3R:9797231-9797326 7 42 4928 FBgn0037757 595.6666667 20.49666667 31.43 0.070509233 2.049113677 1.336302895 4 4 4 0.01 dme-miR-318-3p 6mer2-7 CCAGTG 3R 9797369 9797374 + 3R_9797369_9797374_+ 1 1 1 0 CG8516 FBtr0082141 9797002 9797754 3R + 9797350 9797407 3'utr CG8516 FlyBase G41641.1 TTATTATTCTATCTCAGTACCAGTGCGTCCTATTTTAGGTAAATTAAAGGCAGGGGTC 16 9797380 0.980407145 7 15 122 1 1.278753601 0.157894737 0.125 0.263157895 16 0 0 19 3R:9797350-9797407 6 CG8516 FBtr0082141 9797002 9797754 CCAGTG 6mer2-7 dme-miR-318-3p 3R + 9797359 9797391 3'utr CG8516 FlyBase G31431.1 TATCTCAGTACCAGTGCGTCCTATTTTAGGTAA 6 9797381 0.622931107 3 4 51 0.461538462 0.77815125 0 0.5 0.769230769 6 7 0 6 3R:9797359-9797391 6 9.5 4929 FBgn0037757 595.6666667 20.49666667 31.43 0.015948517 0.463489998 0.302258988 -11 -12 -11.5 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 3R 9797915 9797921 - 3R_9797915_9797921_- 0.521223855 0.521223855 0.521223855 0 CG9467 FBtr0082156 9797767 9798459 3R - 9797867 9797963 3'utr CG9467 FlyBase G49680.1 AAACAGCCAATCAGTTGATTGTCAACCTTGAAGATGATTACTTGTGATTAAAATCGATAGAGCGACTGCTTCAAATTCGAATCTGTCCTGTTGCATG 62 9797923 0.762414697 20 60 494 0.961038961 1.568201724 0.051948052 0.209677419 0.363636364 62 2 1 74 3R:9797867-9797963 7 CG9467 FBtr0082156 9797767 9798459 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 9797909 9797962 3'utr CG9467 FlyBase G37561.2 AACAGCCAATCAGTTGATTGTCAACCTTGAAGATGATTACTTGTGATTAAAATC 18 9797926 0.656996925 9 17 130 0.925925926 1.397940009 0.037037037 0.277777778 0.518518519 18 2 0 25 3R:9797909-9797962 7 25.5 4930 FBgn0037758 388.19 14.69 22.38 0.065689482 1.735874745 1.139410188 2 5 3.5 0.01 dme-miR-14-3p 6mer3-8 AAGACT 3R 9798079 9798084 - 3R_9798079_9798084_- 1 1 1 0 CG9467 FBtr0082156 9797767 9798459 3R - 9797968 9798105 3'utr CG9467 FlyBase G49681.1 AAACCATGTAAACCAGAGTATAAGACTTCTGCAACCGATCATCTATAATTAGCACAACTCTCCTAAAGGGTGCTCCATCAGGACAGATACGAAATCGTTCGGCTTGGATAAGATTGGTTGCCTTAAGCAAAGAAAGTT 120 9798076 0.962533558 12 111 621 0.921428571 1.633468456 0.042857143 0.125 0.25 120 9 2 129 3R:9797968-9798105 6 CG9467 FBtr0082156 9797767 9798459 AAGACT 6mer3-8 dme-miR-14-3p 3R - 9798059 9798104 3'utr CG9467 FlyBase G37563.1 AACCATGTAAACCAGAGTATAAGACTTCTGCAACCGATCATCTATA 70 9798076 0.72754091 5 61 349 0.857142857 1.62324929 0.091836735 0.285714286 0.489795918 70 13 1 84 3R:9798059-9798104 6 89 4931 FBgn0037758 388.19 14.69 22.38 0.229269172 6.058543227 3.976764969 -8 -8 -8 0.01 dme-miR-305-3p 6mer3-8 ATGTGC 3R 9798239 9798244 - 3R_9798239_9798244_- 1 1 1 0 CG9467 FBtr0082156 9797767 9798459 3R - 9798202 9798300 3'utr CG9467 FlyBase G49683.1 ACTGGGCCGTGATGAACTGCCAGCAGGCATTTACCCAATCAATTAATCTCCATTATATGTGCTCGATGTGTTTGCAAATGCAATGTGTATCCCGTAAAC 25 9798243 0.980188227 11 25 207 1 1.447158031 0.107142857 0.12 0.214285714 25 0 0 28 3R:9798202-9798300 6 CG9467 FBtr0082156 9797767 9798459 ATGTGC 6mer3-8 dme-miR-305-3p 3R - 9798151 9798301 3'utr CG9467 FlyBase G37564.1 CACTGGGCCGTGATGAACTGCCAGCAGGCATTTACCCAATCAATTAATCTCCATTATATGTGCTCGATGTGTTTGCAAATGCAATGTGTATCCCGTAAACCCATTTTTTGTGCTCCTCCAAACTTGGATCGTACAGTTAGTAATTTAAAAA 32 9798243 0.990393691 14 23 224 0.673469388 1.041392685 0.040816327 0.375 0.591836735 32 14 2 33 3R:9798151-9798301 6 14.5 4932 FBgn0037758 388.19 14.69 22.38 0.037352843 0.987066031 0.647899911 -1 -1 -1 0.01 dme-miR-8-3p 7mer-A1 AGTATTA 3R 9804292 9804298 - 3R_9804292_9804298_- 0.823349562 0.441909798 0.63262968 0.269718669 FBXO11 FBtr0334684 9803484 9804888 3R - 9804260 9804338 3'utr FBXO11 FlyBase G49702.1 CCCCCTCCTGACTAACAACAATTCGAAGAAAGCAATTCTAAGTATTAACAACAAACTAGATTAGCGGCAGCCAATGCTT 15 9804302 0.966433388 7 13 69 0.875 0.84509804 0.0625 0.066666667 0.125 15 1 1 14 3R:9804260-9804338 7 FBXO11 FBtr0334684 9803484 9804888 AGTATTA 7mer-A1 dme-miR-8-3p 3R - 9804254 9804315 3'utr FBXO11 FlyBase G37573.1 CGAAGAAAGCAATTCTAAGTATTAACAACAAACTAGATTAGCGGCAGCCAATGCTTCAGCAA 7 9804277 0.978236431 5 5 27 0.833333333 1 0 0.571428571 0.75 7 2 0 10 3R:9804254-9804315 7 6 4933 FBgn0037760 1562.243333 36.55333333 56.13333333 0.003840631 0.164143717 0.106888361 4 -21 -8.5 0.01 dme-miR-33-5p 8mer-A1 CAATGCAA 3R 9804607 9804614 - 3R_9804607_9804614_- 0.634552243 0.634552243 0.634552243 0 FBXO11 FBtr0334684 9803484 9804888 3R - 9804579 9804638 3'utr FBXO11 FlyBase G49705.1 TAACTGAGTATGTTACGGATAAATCAATGCAAAAACCACTGAAACTTTTCCCATTTATGT 80 9804615 0.791856305 4 78 257 0.980392157 2 0.274509804 0.2375 0.401960784 80 2 0 100 3R:9804579-9804638 8 FBXO11 FBtr0334684 9803484 9804888 CAATGCAA 8mer-A1 dme-miR-33-5p 3R - 9804601 9804633 3'utr FBXO11 FlyBase G37575.1 GAGTATGTTACGGATAAATCAATGCAAAAACCA 57 9804615 0.769030334 2 53 154 0.964285714 1.908485019 0.321428571 0.385964912 0.583333333 57 3 0 81 3R:9804601-9804633 8 66 4934 FBgn0037760 1562.243333 36.55333333 56.13333333 0.04224694 1.805580886 1.175771971 1 1 1 0.01 dme-miR-980-3p 8mer-A1 GGCAGCTA 3R 9804869 9804876 - 3R_9804869_9804876_- 0.668734347 0.668734347 0.668734347 0 FBXO11 FBtr0334684 9803484 9804888 3R - 9804788 9804910 stop_codon FBXO11 FlyBase G49707.1 ACACACACTGATGGTCAACTAGAGAACCCCCAACGGCAGCTAATCCACTATAGATATATCTTAAGTCGTTAAGGCCAATCTCTCAAATCTCTCGCACATCTCACGCGTTGCTGTAAATATTCA 43 9804868 0.768361185 17 38 185 0.901960784 1.361727836 0.215686275 0.162790698 0.294117647 43 4 1 46 3R:9804788-9804910 8 FBXO11 FBtr0334684 9803484 9804888 GGCAGCTA 8mer-A1 dme-miR-980-3p 3R - 9804788 9805011 stop_codon FBXO11 FlyBase G37577.1 TGCGACTGCGGTGCTGGCACCCTGTCCAATCAGTGTCAACTGCAGGGCGAACCCACTCAGGACACGGACACACTCTACGACTCGGCAGCCCCCATGGAATCACACACACTGATGGTCAACTAGAGAACCCCCAACGGCAGCTAATCCACTATAGATATATCTTAAGTCGTTAAGGCCAATCTCTCAAATCTCTCGCACATCTCACGCGTTGCTGTAAATATTCA 37 9804867 0.957714453 19 30 146 0.771929825 1.643452676 0.298245614 0.459459459 0.649122807 37 13 0 44 3R:9804788-9805011 8 18 4935 FBgn0037760 1562.243333 36.55333333 56.13333333 0.011521893 0.492431151 0.320665083 -8 -9 -8.5 0.01 dme-miR-283-5p 7mer-m1 GATATTT 3R 9983484 9983490 - 3R_9983484_9983490_- 0.765586663 0.765586613 0.765586638 7.07E-08 Art4 FBtr0082150|FBtr0333687 9983184|9982814 9983912|9983912 3R - 9983395 9983507 3'utr Art4 FlyBase G49732.1 ATGTGAATTGTAATACCGATATTTAGCCCGCACGGGACTGCGCTTCAGGAAGTTTATTAGTTAATATGCCGATTGCCAATTGCAGATTTTGCCGTAAGCTTTGAACAAACCAA 14 9983497 0.981348367 10 12 88 0.894736842 1.230448921 0.210526316 0.285714286 0.473684211 14 2 0 17 3R:9983395-9983507 7 Art4 FBtr0082150|FBtr0333687 9983184|9982814 9983912|9983912 GATATTT 7mer-m1 dme-miR-283-5p 3R - 9983454 9983513 3'utr Art4 FlyBase G37592.1 TAACGTATGTGAATTGTAATACCGATATTTAGCCCGCACGGGACTGCGCTTCAGGAAGTT 9 9983498 0.975851168 7 9 53 1 1.079181246 0.416666667 0.222222222 0.416666667 9 0 0 12 3R:9983454-9983513 7 5 4936 FBgn0037770 662.43 26.1 40.01666667 0.007547967 0.191570881 0.124947938 7 8 7.5 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 3R 9988521 9988526 + 3R_9988521_9988526_+ 0.999999998 1 0.999999999 0 Glut4EF FBtr0112576|FBtr0333685|FBtr0333686|FBtr0112577|FBtr0305157 9987787|9988414|9987787|9987787|9987787 9988876|9988876|9995364|9988876|9995364 3R + 9988405 9988673 stop_codon Glut4EF FlyBase G41656.1 TGCAGGGCTAAGTCCACCTGAGCCGCCACCGAGTGCACCGATAGCTTGCTGACTCCTGGATGGCTGTCGGTGGCAGCTGTTGCCACCCCGAGGACACAAAACGCAAAAATGCAAATGAAAAATGGTCTCTTCTTATTTACTCTGCATTGAATTGTGCACCTTAAACACGTAACGGTATCTCTTTTGTTGTTGTGCAGGTGTTTGCCAACTGCCGTGCAAATGTTGCTGACATTTGCGCCCGGGCAACATTTGCAATCTACAATAATCTA 598 9988527 0.930180032 41 581 4567 0.974767596 2.02059802 0.227091633 0.198996656 0.363877822 598 13 6 734 3R:9988405-9988673 6 Glut4EF FBtr0112577|FBtr0333686|FBtr0333685|FBtr0112576|FBtr0305157 9987787|9987787|9988414|9987787|9987787 9988876|9995364|9988876|9988876|9995364 GAAAAA 6mer3-8 dme-miR-980-5p 3R + 9988446 9988553 5'utr Glut4EF FlyBase G31441.1 TAGCTTGCTGACTCCTGGATGGCTGTCGGTGGCAGCTGTTGCCACCCCGAGGACACAAAACGCAAAAATGCAAATGAAAAATGGTCTCTTCTTATTTACTCTGCATTG 257 9988527 0.889713095 15 246 1863 0.966480447 2.061954844 0.078212291 0.319066148 0.511173184 257 10 2 346 3R:9988446-9988553 6 272 4937 FBgn0267336 810.6266667 20.61 31.68 0.335542872 13.19747695 8.585858586 -6 -6 -6 0.01 dme-miR-970-3p 7mer-m8 TCTTATG 3R 9988768 9988774 + 3R_9988768_9988774_+ 0.658999343 0.658999343 0.658999343 0 Glut4EF FBtr0112576|FBtr0333685|FBtr0333686|FBtr0112577|FBtr0305157 9987787|9988414|9987787|9987787|9987787 9988876|9988876|9995364|9988876|9995364 3R + 9988708 9988779 5'utr Glut4EF FlyBase G41657.1 TTGCAGTGCGTAAATATACATATACATATACATATTTATTTCTAAAATGACTTTGTTAATTCTTATGTTAAA 48 9988761 0.991661106 8 48 517 1 1.763427994 0.017241379 0.1875 0.327586207 48 0 0 58 3R:9988708-9988779 7 Glut4EF FBtr0112577|FBtr0333686|FBtr0333685|FBtr0112576|FBtr0305157 9987787|9987787|9988414|9987787|9987787 9988876|9995364|9988876|9988876|9995364 TCTTATG 7mer-m8 dme-miR-970-3p 3R + 9988738 9988807 5'utr Glut4EF FlyBase G31442.1 CATATTTATTTCTAAAATGACTTTGTTAATTCTTATGTTAAAAAGCTGAAAAGCAGTTGGCAACTTTTTA 34 9988761 0.847744276 7 33 380 0.976744186 1.322219295 0.093023256 0.264705882 0.418604651 34 0 1 42 3R:9988738-9988807 7 8 4938 FBgn0267336 810.6266667 20.61 31.68 0.009868908 0.388161087 0.252525253 7 7 7 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 3R 9989179 9989184 + 3R_9989179_9989184_+ 1 1 1 0 Glut4EF FBtr0333686|FBtr0305157 9987787|9987787 9995364|9995364 3R + 9989158 9989185 3'utr Glut4EF FlyBase G41660.1 AATTCATCACGAAGTGGTTTCTGTGTTG 56 9989172 0.866833965 7 53 450 0.941176471 1.329058719 0.882352941 0.214285714 0.352941176 56 2 2 64 3R:9989158-9989185 6 Glut4EF FBtr0333686|FBtr0305157 9987787|9987787 9995364|9995364 TGTGTT 6mer3-8 dme-miR-317-3p 3R + 9989163 9989185 3'utr Glut4EF FlyBase G31444.1 ATCACGAAGTGGTTTCTGTGTTG 45 9989172 0.853386907 7 41 364 0.921875 1.770852012 0.953125 0.333333333 0.53125 45 5 0 59 3R:9989163-9989185 6 50.5 4939 FBgn0267336 810.6266667 20.61 31.68 0.062297482 2.450266861 1.594065657 7 7 7 0.01 dme-miR-304-5p 7mer-m8 TGAGATT 3R 9990038 9990044 + 3R_9990038_9990044_+ 0.620203442 0.620203442 0.620203442 0 Glut4EF FBtr0333686|FBtr0305157 9987787|9987787 9995364|9995364 3R + 9990016 9990060 3'utr Glut4EF FlyBase G41663.1 CCATCTAGGGATAGCTACGCATTGAGATTGAAGAGCAGGAGAATT 52 9990037 0.768017113 5 52 248 1 1.806179974 0.34375 0.211538462 0.359375 52 0 0 64 3R:9990016-9990060 7 Glut4EF FBtr0333686|FBtr0305157 9987787|9987787 9995364|9995364 TGAGATT 7mer-m8 dme-miR-304-5p 3R + 9990017 9990126 3'utr Glut4EF FlyBase G31445.1 CATCTAGGGATAGCTACGCATTGAGATTGAAGAGCAGGAGAATTTACGAATGAAGAAATGAAAATACACAAGGAATTCTTAACCAAATTGGAAGTACAAACTAAAGTCTA 56 9990037 0.958686242 8 54 262 0.954545455 1.924279286 0.397727273 0.392857143 0.613636364 56 4 0 84 3R:9990017-9990126 7 42 4940 FBgn0267336 810.6266667 20.61 31.68 0.051811767 2.037845706 1.325757576 1 1 1 0.01 dme-miR-1007-3p 8mer-A1 TGAGCTTA 3R 9990258 9990265 + 3R_9990258_9990265_+ 0.625363359 0.625363359 0.625363359 0 Glut4EF FBtr0333686|FBtr0305157 9987787|9987787 9995364|9995364 3R + 9990238 9990285 3'utr Glut4EF FlyBase G41665.1 AGGAGGAGCGGAGGGAAAATTGAGCTTAGGCGGCAGCAGCTTTAAAAA 11 9990257 0.918249382 4 11 37 1 1.041392685 0.272727273 0 0 11 0 0 11 3R:9990238-9990285 8 Glut4EF FBtr0333686|FBtr0305157 9987787|9987787 9995364|9995364 TGAGCTTA 8mer-A1 dme-miR-1007-3p 3R + 9990241 9990282 3'utr Glut4EF FlyBase G31446.1 AGGAGCGGAGGGAAAATTGAGCTTAGGCGGCAGCAGCTTTAA 7 9990257 0.922158899 4 7 21 1 1.079181246 0.416666667 0.571428571 0.75 7 0 0 12 3R:9990241-9990282 8 9 4941 FBgn0267336 810.6266667 20.61 31.68 0.011102522 0.436681223 0.284090909 1 1 1 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 4 1012012 1012018 - 4_1012012_1012018_- 0.808818837 0.808818837 0.808818837 0 PlexA FBtr0309865|FBtr0309865 1009893|1009893 1014358|1014358 4 - 1011981 1012062 3'utr PlexA FlyBase G57249.1 GATTCAACATTTCATCTGGTCAATTTATTGCTACTACGCAAATATACTTAAAATTAGAAAATATACCTGTAGCACGTAATGT 24 1012048 0.858672512 8 19 187 0.757575758 1.096910013 0.03030303 0.333333333 0.515151515 24 7 1 25 4:1011981-1012062 7 PlexA FBtr0309865|FBtr0309865 1009893|1009893 1014358|1014358 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 4 - 1011997 1012061 3'utr PlexA FlyBase G43268.1 ATTCAACATTTCATCTGGTCAATTTATTGCTACTACGCAAATATACTTAAAATTAGAAAATATAC 10 1012048 0.78629426 5 9 84 0.909090909 1 0 0.1 0.181818182 10 1 0 10 4:1011997-1012061 7 4 4942 FBgn0025741 5407.953333 93.30333333 143.4166667 0.000739651 0.042870923 0.027890761 30 30 30 0.01 dme-miR-317-3p 6mer2-7 GTGTTC 4 1013224 1013229 - 4_1013224_1013229_- 1 1 1 0 PlexA FBtr0309865 1009893 1014358 4 - 1013216 1013295 3'utr PlexA FlyBase G57250.1 AAAATACCGACGCTTAAATAGTTACCCTTATATAACTTATTTAAAGAACTTATGTGGGTCGCAGGGGTGTTCCGGTTTAT 12 1013226 0.979315855 6 12 100 1 1.079181246 0.25 0 0 12 0 0 12 4:1013216-1013295 6 PlexA FBtr0309865 1009893 1014358 GTGTTC 6mer2-7 dme-miR-317-3p 4 - 1013203 1013252 3'utr PlexA FlyBase G43270.1 AAGAACTTATGTGGGTCGCAGGGGTGTTCCGGTTTATAATGACAAAAAAG 6 1013226 0.963916146 3 6 33 1 0.84509804 0.428571429 0.166666667 0.285714286 6 0 0 7 4:1013203-1013252 6 5.5 4943 FBgn0025741 5407.953333 93.30333333 143.4166667 0.001017021 0.058947519 0.038349797 -3 -3 -3 0.01 dme-miR-980-5p 6mer3-8 GAAAAA 4 1034426 1034431 + 4_1034426_1034431_+ 1 1 1 0 ATPsyn-beta FBtr0344754 1034412 1034917 4 + 1034371 1034491 stop_codon ATPsyn-beta FlyBase G56603.1 AGTTGTAGAAAAGGCTGACCGCCTGGCAAAGGAAGCTGCCTAGATAGGCGTACTGGAAAAATCTTCAAAGTCAGCAAATCTATCATTGAATATTATGCATTGAATTTGTAATAAACTTTGT 20 1034431 0.740830185 13 17 108 0.869565217 1 0.260869565 0.15 0.260869565 20 2 1 20 4:1034371-1034491 6 ATPsyn-beta FBtr0089186|FBtr0333672|FBtr0344754 1034412|1034412|1034412 1034557|1034557|1034917 GAAAAA 6mer3-8 dme-miR-980-5p 4 + 1034400 1034429 stop_codon ATPsyn-beta FlyBase G42751.1 AGGAAGCTGCCTAGATAGGCGTACTGGAAA 6 1034415 0.802220951 2 5 21 0.8 0.903089987 0 0.5 0.7 6 2 0 8 4:1034400-1034429 4 5.5 4944 FBgn0010217 4002.656667 288.0533333 441.7933333 0.001374087 0.019093686 0.01244926 -5 11 3 0.01 dme-miR-2535b-3p 6mer3-8 CCGTGA 4 1034621 1034626 + 4_1034621_1034626_+ 1 1 1 0 ATPsyn-beta FBtr0344754 1034412 1034917 4 + 1034564 1034671 3'utr ATPsyn-beta FlyBase G56604.1 AAAGCAAAATATTTAATGTGAAAAAGCTTCAGATTAAGTGAGTATATGGTAGTATCACCGTGAAATTCTACAGGTAGAATTTAAACTGACTATTAATTTCTGCATTGG 20 1034618 0.982581571 10 19 143 1 1.342422681 0.181818182 0.1 0.181818182 20 0 0 22 4:1034564-1034671 6 ATPsyn-beta FBtr0344754 1034412 1034917 CCGTGA 6mer3-8 dme-miR-2535b-3p 4 + 1034587 1034664 3'utr ATPsyn-beta FlyBase G42753.1 AAGCTTCAGATTAAGTGAGTATATGGTAGTATCACCGTGAAATTCTACAGGTAGAATTTAAACTGACTATTAATTTCT 11 1034618 0.983733645 5 11 89 1 1.176091259 0.066666667 0.181818182 0.4 11 0 0 15 4:1034587-1034664 6 7.5 4945 FBgn0010217 4002.656667 288.0533333 441.7933333 0.001873756 0.026036845 0.016976263 3 3 3 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 4 1034707 1034712 + 4_1034707_1034712_+ 0.999622191 0.999965202 0.999793696 0.000242538 ATPsyn-beta FBtr0344754 1034412 1034917 4 + 1034691 1034731 3'utr ATPsyn-beta FlyBase G56605.1 ACACTATGTTATCATTTTGACTGACTGTCGAAAATAAACCA 17 1034706 0.666028667 8 16 152 1 1.301029996 0.15 0.176470588 0.3 17 0 0 20 4:1034691-1034731 6 ATPsyn-beta FBtr0344754 1034412 1034917 TTGACT 6mer3-8 dme-miR-1012-3p 4 + 1034678 1034723 3'utr ATPsyn-beta FlyBase G42754.1 TATATTAAAAATTACACTATGTTATCATTTTGACTGACTGTCGAAA 14 1034707 0.987529492 5 14 129 1 1.230448921 0.411764706 0.214285714 0.352941176 14 0 0 17 4:1034678-1034723 6 15 4946 FBgn0010217 4002.656667 288.0533333 441.7933333 0.003747511 0.05207369 0.033952527 1 0 0.5 0.01 dme-miR-980-5p 7mer-m1 AAAAACT 4 1035728 1035734 - 4_1035728_1035734_- 0.765586663 0.765586663 0.765586663 0 CaMKII FBtr0333673|FBtr0300378|FBtr0333674|FBtr0089218|FBtr0333675|FBtr0089219|FBtr0089217|FBtr0100146|FBtr0100148|FBtr0100147 1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286 1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277 4 - 1035706 1035737 3'utr CaMKII FlyBase G57301.1 AAAAAAAACTTGGACTTAAACACATTTAAAAA 6 1035727 0.921567212 2 6 20 1 0.954242509 0 0.5 0.666666667 6 0 0 9 4:1035706-1035737 7 CaMKII FBtr0089217|FBtr0100146|FBtr0100148|FBtr0100147|FBtr0333675|FBtr0089219|FBtr0333674|FBtr0089218|FBtr0333673|FBtr0300378 1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286 1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277 AAAAACT 7mer-m1 dme-miR-980-5p 4 - 1035715 1035774 3'utr CaMKII FlyBase G43304.1 TGAAATGATTATACATTTTACCTGATAGTACATGTTAAAAAAAAACTTGGACTTAAACAC 11 1035727 0.858366592 4 10 74 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 4:1035715-1035774 7 4.5 4947 FBgn0264607 1116.67 52.21333333 80.09666667 0.004029839 0.086184883 0.056182113 -7 -7 -7 0.01 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 4 1035750 1035756 - 4_1035750_1035756_- 0.823349562 0.823349562 0.823349562 0 CaMKII FBtr0333673|FBtr0300378|FBtr0333674|FBtr0089218|FBtr0333675|FBtr0089219|FBtr0089217|FBtr0100146|FBtr0100148|FBtr0100147 1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286 1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277 4 - 1035744 1035786 3'utr CaMKII FlyBase G57302.1 ACTTAATCATTGTGAAATGATTATACATTTTACCTGATAGTAC 8 1035758 0.756657061 3 7 90 0.888888889 0.602059991 0 0.125 0.222222222 8 0 1 8 4:1035744-1035786 7 CaMKII FBtr0089217|FBtr0100146|FBtr0100148|FBtr0100147|FBtr0333675|FBtr0089219|FBtr0333674|FBtr0089218|FBtr0333673|FBtr0300378 1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286 1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 4 - 1035715 1035774 3'utr CaMKII FlyBase G43304.1 TGAAATGATTATACATTTTACCTGATAGTACATGTTAAAAAAAAACTTGGACTTAAACAC 11 1035758 0.858366592 4 10 74 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 4:1035715-1035774 7 6.5 4948 FBgn0264607 1116.67 52.21333333 80.09666667 0.005820878 0.124489275 0.081151941 2 2 2 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA 4 1037168 1037173 - 4_1037168_1037173_- 1 1 1 0 CaMKII FBtr0333673|FBtr0300378|FBtr0333674|FBtr0089218|FBtr0333675|FBtr0089219|FBtr0089217|FBtr0100146|FBtr0100148|FBtr0100147 1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286 1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277 4 - 1037127 1037200 3'utr CaMKII FlyBase G57305.1 AATAGTTTATTGCGAATAAAGATGCTAGTGCAAATTTTATTAATTTATTTACCTTTTGAAATAAAACTATCTAA 71 1037178 0.974359831 6 69 430 0.965116279 1.919078092 0.61627907 0.169014085 0.313953488 71 3 0 83 4:1037127-1037200 6 CaMKII FBtr0089217|FBtr0100146|FBtr0100148|FBtr0100147|FBtr0333675|FBtr0089219|FBtr0333674|FBtr0089218|FBtr0333673|FBtr0300378 1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286 1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277 GTGCAA 6mer3-8 dme-miR-92b-3p 4 - 1037153 1037195 3'utr CaMKII FlyBase G43305.1 TTTATTGCGAATAAAGATGCTAGTGCAAATTTTATTAATTTAT 62 1037178 0.855464725 3 61 314 0.990654206 2.025305865 0.635514019 0.403225806 0.654205607 62 1 0 106 4:1037153-1037195 6 66 4949 FBgn0264607 1116.67 52.21333333 80.09666667 0.059104301 1.264044944 0.824004328 5 5 5 0.01 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 4 108111 108118 + 4_108111_108118_+ 0.625364009 0.625364009 0.625364009 0 pan FBtr0308615 104412 110059 4 + 108033 108174 3'utr pan FlyBase G56193.1 TCCTATATTTGCATTGCCATCAATTGGTAATTGTAGTTTAAATATTTCTTCAATGCCAAACACATCCCGAAACCCTATTGGTGCTAACCCACGAGATATTAATAATCCCCTTAGCATCAATCAGCTGACTAAAAGACGTGAA 79 108110 0.957714487 11 78 379 0.989247312 1.963787827 0.086021505 0.151898734 0.279569892 79 1 0 92 4:108033-108174 8 pan FBtr0308615 104412 110059 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 4 + 108090 108131 3'utr pan FlyBase G42420.1 AAACACATCCCGAAACCCTATTGGTGCTAACCCACGAGATAT 33 108110 0.920295414 2 32 140 0.961538462 1.698970004 0.076923077 0.454545455 0.653846154 33 2 0 50 4:108090-108131 8 47.5 4950 FBgn0085432 3045.83 84.67333333 129.51 0.015595092 0.56097945 0.366767045 1 1 1 0.01 dme-miR-14-3p 6mer3-8 AAGACT 4 108211 108216 + 4_108211_108216_+ 1 1 1 0 pan FBtr0308615 104412 110059 4 + 108180 108289 3'utr pan FlyBase G56194.1 AAATGTTGAGTTAATTGAAGCTAGTGAGTCAAAGACTATAGTTGCCCATGCCGCTACATCCATTATTCAACATGTAGCAGTGAACGGCTATCATGCTAATCACTCGCTTT 55 108219 0.979940788 9 47 330 0.861538462 1.146128036 0.353846154 0.166666667 0.307692308 54 6 3 56 4:108180-108289 6 pan FBtr0308615 104412 110059 AAGACT 6mer3-8 dme-miR-14-3p 4 + 108181 108233 3'utr pan FlyBase G42421.1 AATGTTGAGTTAATTGAAGCTAGTGAGTCAAAGACTATAGTTGCCCATGCCGC 31 108219 0.693869967 5 28 178 0.843137255 1.633468456 0.254901961 0.451612903 0.666666667 31 8 0 43 4:108181-108233 6 35 4951 FBgn0085432 3045.83 84.67333333 129.51 0.011491121 0.413353279 0.270249402 -8 -8 -8 0.01 dme-miR-277-3p 7mer-m8 TGCATTT 4 108825 108831 + 4_108825_108831_+ 0.620204266 0.620204266 0.620204266 0 pan FBtr0309803|FBtr0100245|FBtr0308615|FBtr0089162|FBtr0112657|FBtr0089161 108491|108491|104412|108491|108491|108491 114270|109770|110059|110059|110059|110059 4 + 108736 108853 3'utr pan FlyBase G56197.2 AAAGAAACATGAGTCAAATCTCAGGCTAGGCCGTGCCAAATAGAATAAACAGACAATACACACTAAAACTTAGTTACATAAACATCTATTGCATTTGACACCTTATAAAATAATATTT 160 108824 0.994017517 10 156 1233 0.97382199 1.968482949 0.020942408 0.15 0.287958115 160 4 1 186 4:108736-108853 7 pan FBtr0089161|FBtr0089162|FBtr0112657|FBtr0308615|FBtr0309803|FBtr0100245 108491|108491|108491|104412|108491|108491 110059|110059|110059|110059|114270|109770 TGCATTT 7mer-m8 dme-miR-277-3p 4 + 108737 108856 3'utr pan FlyBase G42425.1 AAGAAACATGAGTCAAATCTCAGGCTAGGCCGTGCCAAATAGAATAAACAGACAATACACACTAAAACTTAGTTACATAAACATCTATTGCATTTGACACCTTATAAAATAATATTTTCA 93 108824 0.976874429 8 88 677 0.939189189 2.1430148 0.054054054 0.430107527 0.641891892 93 9 0 139 4:108737-108856 7 108.5 4952 FBgn0085432 3045.83 84.67333333 129.51 0.035622474 1.281395166 0.837773145 1 1 1 0.01 dme-miR-31a-5p 7mer-A1 CTTGCCA 4 108935 108941 + 4_108935_108941_+ 0.823349562 0.823349562 0.823349562 0 pan FBtr0309803|FBtr0100245|FBtr0308615|FBtr0089162|FBtr0112657|FBtr0089161 108491|108491|104412|108491|108491|108491 114270|109770|110059|110059|110059|110059 4 + 108877 108953 3'utr pan FlyBase G56198.1 TCTATTTATTTAGCTTAACACAACCAAATTATGTATTTTATTTTAAAATTAGACACAACTTGCCAAAATCCATTAAT 14 108914 0.98663349 9 13 118 0.928571429 1.113943352 0 0 0 14 1 0 13 4:108877-108953 7 pan FBtr0089161|FBtr0089162|FBtr0112657|FBtr0308615|FBtr0309803|FBtr0100245 108491|108491|108491|104412|108491|108491 110059|110059|110059|110059|114270|109770 CTTGCCA 7mer-A1 dme-miR-31a-5p 4 + 108896 108947 3'utr pan FlyBase G42426.1 ACAACCAAATTATGTATTTTATTTTAAAATTAGACACAACTTGCCAAAATCC 7 108905 0.933265951 5 6 51 1 1 0 0.285714286 0.5 7 0 0 10 4:108896-108947 7 4 4953 FBgn0085432 3045.83 84.67333333 129.51 0.001313271 0.047240375 0.030885646 21 30 25.5 0.01 dme-miR-980-5p 7mer-A1 AAAAACA 4 109041 109047 + 4_109041_109047_+ 0.782911824 0.782911824 0.782911824 0 pan FBtr0309803|FBtr0100245|FBtr0308615|FBtr0089162|FBtr0112657|FBtr0089161 108491|108491|104412|108491|108491|108491 114270|109770|110059|110059|110059|110059 4 + 109002 109077 3'utr pan FlyBase G56199.1 AATTTAACTAATGGTTTCTGCACTAAAACTAGGAGAACAAAAAACATGGACTACGACGATTGTCGGTCGAATCACT 433 109048 0.983313628 8 422 1265 0.976424361 1.997386384 0.379174853 0.155092593 0.282907662 432 8 4 497 4:109002-109077 7 pan FBtr0089161|FBtr0089162|FBtr0112657|FBtr0308615|FBtr0309803|FBtr0100245 108491|108491|108491|104412|108491|108491 110059|110059|110059|110059|114270|109770 AAAAACA 7mer-A1 dme-miR-980-5p 4 + 109011 109075 3'utr pan FlyBase G42427.1 AATGGTTTCTGCACTAAAACTAGGAGAACAAAAAACATGGACTACGACGATTGTCGGTCGAATCA 285 109048 0.983807491 5 276 809 0.997555012 2.610660163 0.344743276 0.322807018 0.528117359 285 1 0 408 4:109011-109075 7 345 4954 FBgn0085432 3045.83 84.67333333 129.51 0.113269618 4.074482324 2.663886959 -7 -7 -7 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 4 109734 109739 + 4_109734_109739_+ 1 1 1 0 pan FBtr0309803|FBtr0309803|FBtr0100245|FBtr0100245|FBtr0308615|FBtr0308615|FBtr0089162|FBtr0089162|FBtr0112657|FBtr0112657|FBtr0089161|FBtr0089161 108491|108491|108491|108491|104412|104412|108491|108491|108491|108491|108491|108491 114270|114270|109770|109770|110059|110059|110059|110059|110059|110059|110059|110059 4 + 109693 109764 3'utr pan FlyBase G56203.1 TTTCTTTAGTTAGGTTTCATTAGCAGACTTTCATTATTACATACTTACACGGAAAATCATAATAAACAAAAT 7 109710 0.989874505 5 7 70 1 0.954242509 0.111111111 0.142857143 0.333333333 7 0 0 9 4:109693-109764 6 pan FBtr0089161|FBtr0089161|FBtr0089162|FBtr0089162|FBtr0112657|FBtr0112657|FBtr0308615|FBtr0308615|FBtr0309803|FBtr0309803|FBtr0100245|FBtr0100245 108491|108491|108491|108491|108491|108491|104412|104412|108491|108491|108491|108491 110059|110059|110059|110059|110059|110059|110059|110059|114270|114270|109770|109770 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 4 + 109697 109752 3'utr pan FlyBase G42432.1 TTTAGTTAGGTTTCATTAGCAGACTTTCATTATTACATACTTACACGGAAAATCAT 7 109738 0.977818992 7 7 48 1 1.113943352 0 0.428571429 0.692307692 7 0 0 13 4:109697-109752 6 3.5 4955 FBgn0085432 3045.83 84.67333333 129.51 0.001149112 0.041335328 0.02702494 24 -4 10 0.01 dme-miR-1006-3p 8mer-A1 CGAATTTA 4 109902 109909 + 4_109902_109909_+ 0.671697512 0.671697512 0.671697512 0 pan FBtr0309803|FBtr0308615|FBtr0089162|FBtr0112657|FBtr0089161 108491|104412|108491|108491|108491 114270|110059|110059|110059|110059 4 + 109828 109949 3'utr pan FlyBase G56204.1 ATATGTGTACGATATATATTATAAGCTAAATGTAAATATGTATTTTCTTATATAGAACGTACTGATAATCTTTACGAATTTATTGACCATAAGACCTGATAGCCTTTATTCCATGTAAAACG 197 109917 0.870164064 21 179 1457 0.903361345 1.55428721 0.071428571 0.172588832 0.31512605 197 18 5 215 4:109828-109949 8 pan FBtr0089161|FBtr0089162|FBtr0112657|FBtr0308615|FBtr0309803 108491|108491|108491|104412|108491 110059|110059|110059|110059|114270 CGAATTTA 8mer-A1 dme-miR-1006-3p 4 + 109850 109972 3'utr pan FlyBase G42433.1 AAGCTAAATGTAAATATGTATTTTCTTATATAGAACGTACTGATAATCTTTACGAATTTATTGACCATAAGACCTGATAGCCTTTATTCCATGTAAAACGTAAAATCCACATCTACAAACGAA 126 109927 0.982028755 19 117 869 0.922680412 2.252853031 0.113402062 0.404761905 0.613402062 126 15 0 179 4:109850-109972 8 52 4956 FBgn0085432 3045.83 84.67333333 129.51 0.017072522 0.614124872 0.401513397 -15 -25 -20 0.01 dme-miR-190-5p 8mer-m1 ACATATCT 4 110236 110243 + 4_110236_110243_+ 0.577627638 0.577623975 0.577625807 2.55E-06 pan FBtr0309803 108491 114270 4 + 110164 110279 3'utr pan FlyBase G56206.1 TTGTTTTTAATGTGTTAGTTATTTAAAATGCTTTAGGTTTAATTATCTCATATGTACACCGGTACTTAATATACATATCTTGATTTTCCGGAATGACAATCCTGTATATCCTATAA 22 110234 0.988908584 11 19 192 0.892857143 1.397940009 0.214285714 0.181818182 0.357142857 22 3 0 25 4:110164-110279 8 pan FBtr0309803 108491 114270 ACATATCT 8mer-m1 dme-miR-190-5p 4 + 110176 110263 3'utr pan FlyBase G42436.1 TGTTAGTTATTTAAAATGCTTTAGGTTTAATTATCTCATATGTACACCGGTACTTAATATACATATCTTGATTTTCCGGAATGACAAT 32 110233 0.980541349 15 30 323 0.9375 1.653212514 0.104166667 0.375 0.583333333 32 3 0 45 4:110176-110263 8 11 4957 FBgn0085432 3045.83 84.67333333 129.51 0.003611495 0.129911031 0.084935526 2 3 2.5 0.01 dme-miR-970-3p 6mer3-8 TCTTAT 4 110630 110635 + 4_110630_110635_+ 1 1 1 0 pan FBtr0309803 108491 114270 4 + 110493 110807 3'utr pan FlyBase G56209.1 TTTCAATTGTAATGCCAATAAATTTTTAAAATATCATTCTTACCCTCTGGGTTGATTAACGTGTATCTAGTAGTGTAGAAAATCAACTTTACTATAGTAACTAAAATTTAAATGGTAAACAACTTTTAAAACGTATCTCTTATTTTACTTTATATTAGGAGTATTATAATTTTTAAATTGTATAGACACAAAATCTTCATTGACCGTGCTAAAGTAAAGACATAAATGCGAGCATAACTAAGCATTTTAATAACCTTATTTTAACTAAGATATTTACAGTATTGCCAAATGTTGTTGCGAATATATATATAAAAA 181 110632 0.987794173 36 176 1586 0.967741935 2.322219295 0.129032258 0.165745856 0.304147465 181 7 0 210 4:110493-110807 6 pan FBtr0309803 108491 114270 TCTTAT 6mer3-8 dme-miR-970-3p 4 + 110604 110664 3'utr pan FlyBase G42438.2 ATGGTAAACAACTTTTAAAACGTATCTCTTATTTTACTTTATATTAGGAGTATTATAATTT 43 110632 0.693535057 7 40 439 0.964285714 1.73239376 0.017857143 0.285714286 0.464285714 42 2 0 54 4:110604-110664 6 57.5 4958 FBgn0085432 3045.83 84.67333333 129.51 0.01887827 0.679080387 0.44398116 -2 -2 -2 0.01 dme-miR-970-3p 6mer2-7 CTTATG 4 110894 110899 + 4_110894_110899_+ 1 1 1 0 pan FBtr0309803 108491 114270 4 + 110861 110921 3'utr pan FlyBase G56210.1 ATTTCCCTTTATTGTCTTTCCTTTTTCATAAGCCTTATGTAACTGATAGCATTTGTAAATA 27 110897 0.985390143 12 26 206 0.96875 1.491361694 0.21875 0.148148148 0.28125 27 1 0 31 4:110861-110921 6 pan FBtr0309803 108491 114270 CTTATG 6mer2-7 dme-miR-970-3p 4 + 110881 110920 3'utr pan FlyBase G42440.1 CTTTTTCATAAGCCTTATGTAACTGATAGCATTTGTAAAT 11 110898 0.984870316 4 8 82 0.692307692 0.954242509 0 0.181818182 0.307692308 11 4 0 9 4:110881-110920 6 16.5 4959 FBgn0085432 3045.83 84.67333333 129.51 0.005417243 0.194866546 0.127403289 -3 -4 -3.5 0.01 dme-miR-252-5p 6mer3-8 GTACTT 4 1115157 1115162 - 4_1115157_1115162_- 1 1 1 0 Cals FBtr0345193|FBtr0089208 1112872|1115077 1115826|1115826 4 - 1115137 1115231 3'utr Cals FlyBase G57337.1 AACTTAGATTAAGGAACATATCGAAGCTATAAAAAATTTATTTTCAACCGACCATAAACTTGTGAAATTGTACTTTTAAAATAGAATTTTTAATT 23 1115163 0.966308239 9 23 130 1 1.462397998 0.068965517 0.173913043 0.344827586 23 0 0 29 4:1115137-1115231 6 Cals FBtr0345193|FBtr0089208 1112872|1115077 1115826|1115826 GTACTT 6mer3-8 dme-miR-252-5p 4 - 1115152 1115183 3'utr Cals FlyBase G43324.1 CGACCATAAACTTGTGAAATTGTACTTTTAAA 6 1115163 0.697687705 2 6 41 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 4:1115152-1115183 6 8.5 4960 FBgn0039928 3212.163333 100.7466667 154.9366667 0.002646192 0.084370037 0.054861126 1 1 1 0.01 dme-miR-184-3p 7mer-m8 TCCGTCC 4 1115354 1115360 - 4_1115354_1115360_- 0.661615243 0.661615243 0.661615243 0 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 4 - 1115271 1115478 3'utr Cals FlyBase G57338.1 AAATATACACATAAGATCTATTTAATTTATAGTTTGTCAGCCCTCACCTTAAGATGTAAAATGCACATGTCTACCAAATTTCAACTGAATTCTGTCGCAATGCATAGGAGGAAGTTTCTCCGTCCCAATAATTTAAGCCTAATAATAAAACATAAAAAAAATTTGAAATGGATCGTAATACCCAAACAATGTTGACTTATTTAATAAA 253 1115361 0.983445027 36 232 1788 0.918644068 1.8309093 0.088135593 0.134387352 0.257627119 253 21 3 271 4:1115271-1115478 7 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 TCCGTCC 7mer-m8 dme-miR-184-3p 4 - 1115338 1115477 3'utr Cals FlyBase G43326.1 AATATACACATAAGATCTATTTAATTTATAGTTTGTCAGCCCTCACCTTAAGATGTAAAATGCACATGTCTACCAAATTTCAACTGAATTCTGTCGCAATGCATAGGAGGAAGTTTCTCCGTCCCAATAATTTAAGCCTA 119 1115361 0.82768637 25 108 801 0.926966292 2.217483944 0.078651685 0.361344538 0.573033708 119 13 0 165 4:1115338-1115477 7 68 4961 FBgn0039928 3212.163333 100.7466667 154.9366667 0.021169534 0.674960296 0.438889008 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 4 1115401 1115406 - 4_1115401_1115406_- 1 1 1 0 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 4 - 1115271 1115478 3'utr Cals FlyBase G57338.1 AAATATACACATAAGATCTATTTAATTTATAGTTTGTCAGCCCTCACCTTAAGATGTAAAATGCACATGTCTACCAAATTTCAACTGAATTCTGTCGCAATGCATAGGAGGAAGTTTCTCCGTCCCAATAATTTAAGCCTAATAATAAAACATAAAAAAAATTTGAAATGGATCGTAATACCCAAACAATGTTGACTTATTTAATAAA 253 1115399 0.983445027 36 232 1788 0.918644068 1.8309093 0.088135593 0.134387352 0.257627119 253 21 3 271 4:1115271-1115478 6 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 4 - 1115338 1115477 3'utr Cals FlyBase G43326.1 AATATACACATAAGATCTATTTAATTTATAGTTTGTCAGCCCTCACCTTAAGATGTAAAATGCACATGTCTACCAAATTTCAACTGAATTCTGTCGCAATGCATAGGAGGAAGTTTCTCCGTCCCAATAATTTAAGCCTA 119 1115399 0.82768637 25 108 801 0.926966292 2.217483944 0.078651685 0.361344538 0.573033708 119 13 0 165 4:1115338-1115477 6 70.5 4962 FBgn0039928 3212.163333 100.7466667 154.9366667 0.021947825 0.699775013 0.455024634 -7 -7 -7 0.01 dme-miR-305-5p 8mer-m1 AGTACAAT 4 1115532 1115539 - 4_1115532_1115539_- 0.570363044 0.570363044 0.570363044 0 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 4 - 1115501 1115556 3'utr Cals FlyBase G57339.1 AAATATAGCTAAGGTATAGTACAATTATTATGTAACCAGCGTCGCTAGATCCATAA 15 1115531 0.721025649 5 12 107 0.85 1.230448921 0.05 0.266666667 0.45 15 3 0 17 4:1115501-1115556 8 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 AGTACAAT 8mer-m1 dme-miR-305-5p 4 - 1115511 1115558 3'utr Cals FlyBase G43327.1 AAAAATATAGCTAAGGTATAGTACAATTATTATGTAACCAGCGTCGCT 11 1115531 0.724160438 7 8 75 0.769230769 1 0.076923077 0.181818182 0.307692308 11 3 0 10 4:1115511-1115558 8 8.5 4963 FBgn0039928 3212.163333 100.7466667 154.9366667 0.002646192 0.084370037 0.054861126 -8 -8 -8 0.01 dme-miR-276a-3p 6mer3-8 AGTTCC 4 1115721 1115726 - 4_1115721_1115726_- 0.998265564 0.999510592 0.998888078 0.000880348 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 4 - 1115654 1115736 3'utr Cals FlyBase G57340.2 GTTATAAATGAGTTCCAAAGAGTCTGCATATATGGCTGCAGGCATAATTGTAAAGACGTGCATTTATAGTTTTTTTTGCAACA 31 1115724 0.825079658 7 27 186 0.909090909 1.176091259 0.212121212 0.032258065 0.090909091 31 2 1 30 4:1115654-1115736 6 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 AGTTCC 6mer3-8 dme-miR-276a-3p 4 - 1115692 1115738 3'utr Cals FlyBase G43328.1 AAGTTATAAATGAGTTCCAAAGAGTCTGCATATATGGCTGCAGGCAT 11 1115724 0.975506843 2 10 60 0.923076923 1.079181246 0.153846154 0.181818182 0.307692308 11 1 0 12 4:1115692-1115738 6 12.5 4964 FBgn0039928 3212.163333 100.7466667 154.9366667 0.003891458 0.124073584 0.080678127 -2 -2 -2 0.01 dme-miR-932-5p 7mer-m8 GGAATTG 4 1125061 1125067 + 4_1125061_1125067_+ 0.70297287 0.70297287 0.70297287 0 Arf102F FBtr0089192 1125035 1125325 4 + 1125040 1125142 3'utr Arf102F FlyBase G56613.1 TATTCCTTATATTGTAAGATAGGAATTGCTGTTCTCGTATGCTGAAAACTAGATTTTAAATAAACTTGTAAATGTATATAAACTCGTTTGGAACTTTGTTGTA 43 1125079 0.867436297 14 40 362 0.9375 1.352182518 0.291666667 0.11627907 0.208333333 43 2 1 45 4:1125040-1125142 7 Arf102F FBtr0089192 1125035 1125325 GGAATTG 7mer-m8 dme-miR-932-5p 4 + 1125050 1125102 3'utr Arf102F FlyBase G42763.1 ATTGTAAGATAGGAATTGCTGTTCTCGTATGCTGAAAACTAGATTTTAAATAA 40 1125067 0.690812684 8 36 293 0.938461538 1.183269844 0.215384615 0.5 0.692307692 40 1 3 61 4:1125050-1125102 7 31 4965 FBgn0013749 854.0466667 143.2933333 218.6 0.036297782 0.216339444 0.141811528 -18 -6 -12 0.01 dme-miR-31a-5p 6mer2-7 CTTGCC 4 1125186 1125191 + 4_1125186_1125191_+ 1 1 1 0 Arf102F FBtr0089192 1125035 1125325 4 + 1125152 1125217 3'utr Arf102F FlyBase G56614.1 TGTCCACGTTTTATGTGTTGGTGAGAAAACTGCACTTGCCTTAGTTGTATTTTTAAAAATTAGTGA 12 1125191 0.987250927 4 12 119 1 1.176091259 0.2 0.25 0.4 12 0 0 15 4:1125152-1125217 6 Arf102F FBtr0089192 1125035 1125325 CTTGCC 6mer2-7 dme-miR-31a-5p 4 + 1125136 1125204 3'utr Arf102F FlyBase G42764.1 TGTTGTAAATTTAAAATGTCCACGTTTTATGTGTTGGTGAGAAAACTGCACTTGCCTTAGTTGTATTTT 13 1125192 0.981910858 7 12 92 1 1.230448921 0.352941176 0.307692308 0.470588235 13 0 0 17 4:1125136-1125204 6 9.5 4966 FBgn0013749 854.0466667 143.2933333 218.6 0.011123514 0.066297571 0.043458371 -5 -6 -5.5 0.01 dme-miR-14-3p 7mer-m8 AAGACTG 4 113107 113113 + 4_113107_113113_+ 0.671795832 0.671795832 0.671795832 0 pan FBtr0309803 108491 114270 4 + 113087 113126 3'utr pan FlyBase G56213.1 AAAGGCCATTGCCAATTTAAAAGACTGTTTAACACAAATT 22 113115 0.662937892 6 21 153 0.931034483 1.431363764 0 0.318181818 0.482758621 22 2 0 27 4:113087-113126 7 pan FBtr0309803 108491 114270 AAGACTG 7mer-m8 dme-miR-14-3p 4 + 113088 113124 3'utr pan FlyBase G42443.1 AAGGCCATTGCCAATTTAAAAGACTGTTTAACACAAA 13 113114 0.653518928 4 12 96 0.875 1.322219295 0 0.461538462 0.708333333 13 3 0 21 4:113088-113124 7 17.5 4967 FBgn0085432 3045.83 84.67333333 129.51 0.00574556 0.20667664 0.135124701 -8 -7 -7.5 0.01 dme-miR-14-3p 6mer2-7 AGACTG 4 1223079 1223084 + 4_1223079_1223084_+ 0.999998384 0.999678383 0.999838383 0.000226274 Mitf FBtr0307327|FBtr0307328|FBtr0307326|FBtr0307329 1222790|1222790|1222790|1222790 1223450|1223450|1224467|1224467 4 + 1223051 1223100 5'utr Mitf FlyBase G56626.2 ACGTTAGTTTTAGTAAATGGAAACTGTTAGACTGTGACGAAACAAATATA 338 1223077 0.638489651 6 331 1807 0.985294118 2.303196057 0.424019608 0.174556213 0.316176471 338 5 1 402 4:1223051-1223100 6 Mitf FBtr0307327|FBtr0307328|FBtr0307326|FBtr0307329 1222790|1222790|1222790|1222790 1223450|1223450|1224467|1224467 AGACTG 6mer2-7 dme-miR-14-3p 4 + 1223051 1223099 5'utr Mitf FlyBase G42775.1 ACGTTAGTTTTAGTAAATGGAAACTGTTAGACTGTGACGAAACAAATAT 269 1223078 0.623494096 7 261 1355 0.976439791 2.571708832 0.363874346 0.31598513 0.518324607 269 9 0 373 4:1223051-1223099 6 302 4968 FBgn0263112 1506.45 56.91333333 87.3 0.200471307 5.306313693 3.459335624 2 1 1.5 0.01 dme-miR-184-5p 6mer3-8 TGATAA 4 1223318 1223323 + 4_1223318_1223323_+ 0.999661434 0.999569706 0.99961557 6.48E-05 Mitf FBtr0307327|FBtr0307328|FBtr0307326|FBtr0307329 1222790|1222790|1222790|1222790 1223450|1223450|1224467|1224467 4 + 1223263 1223352 5'utr Mitf FlyBase G56628.1 AATCTAAATCATCAGGTATAATTTCAGAGCGCCTTCCTTTTCAAATAAGGAGTTGTGATAATTGTGTATATTAACATTGACAAATGTTTT 59 1223315 0.936208323 14 56 486 0.943661972 1.826074803 0.098591549 0.186440678 0.323943662 59 4 0 67 4:1223263-1223352 6 Mitf FBtr0307327|FBtr0307328|FBtr0307326|FBtr0307329 1222790|1222790|1222790|1222790 1223450|1223450|1224467|1224467 TGATAA 6mer3-8 dme-miR-184-5p 4 + 1223269 1223346 5'utr Mitf FlyBase G42777.1 AATCATCAGGTATAATTTCAGAGCGCCTTCCTTTTCAAATAAGGAGTTGTGATAATTGTGTATATTAACATTGACAAA 45 1223324 0.734396296 13 43 351 0.938461538 1.086359831 0.276923077 0.377777778 0.569230769 45 0 4 61 4:1223269-1223346 6 29 4969 FBgn0263112 1506.45 56.91333333 87.3 0.019250556 0.509546679 0.332187858 3 -6 -1.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 4 1223688 1223694 + 4_1223688_1223694_+ 0.754178804 0.739765851 0.746972328 0.010191459 Mitf FBtr0307326|FBtr0307326|FBtr0307326|FBtr0307329|FBtr0307329|FBtr0307329 1222790|1222790|1222790|1222790|1222790|1222790 1224467|1224467|1224467|1224467|1224467|1224467 4 + 1223622 1223708 3'utr Mitf FlyBase G56629.1 ATGATTCGTTAAAGTTGTCCGATCTTCATGAGTGCTACAGCATTGAAAATGTAGTCCAAAAACTAATGTGATAATATAATAAGAACT 33 1223685 0.863521711 12 30 222 0.95 1.579783597 0.25 0.212121212 0.35 33 2 0 38 4:1223622-1223708 7 Mitf FBtr0307326|FBtr0307326|FBtr0307326|FBtr0307329|FBtr0307329|FBtr0307329 1222790|1222790|1222790|1222790|1222790|1222790 1224467|1224467|1224467|1224467|1224467|1224467 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 4 + 1223629 1223711 3'utr Mitf FlyBase G42779.1 GTTAAAGTTGTCCGATCTTCATGAGTGCTACAGCATTGAAAATGTAGTCCAAAAACTAATGTGATAATATAATAAGAACTTAA 23 1223686 0.971937342 7 22 149 0.971428571 1.230448921 0.085714286 0.391304348 0.6 23 0 1 34 4:1223629-1223711 7 15.5 4970 FBgn0263112 1506.45 56.91333333 87.3 0.01028909 0.272343915 0.177548683 3 2 2.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 4 1225679 1225684 - 4_1225679_1225684_- 1 1 1 0 Dyrk3 FBtr0100406 1225087 1226157 4 - 1225672 1225732 3'utr Dyrk3 FlyBase G57397.1 ATCGAATGTGTACATTATTTATTTAATAATTCCGAATTTTTAAAACAGTGATCTTTGCCAA 9 1225682 0.990629088 6 8 76 0.916666667 0.740362689 0 0.333333333 0.5 9 0 1 11 4:1225672-1225732 6 Dyrk3 FBtr0100406 1225087 1226157 TGATCT 6mer3-8 dme-bantam-3p 4 - 1225665 1225694 3'utr Dyrk3 FlyBase G43373.1 TTTAAAACAGTGATCTTTGCCAATTTTTTT 8 1225680 0.625997628 3 7 57 0.916666667 1.041392685 0 0.25 0.5 8 1 0 11 4:1225665-1225694 6 7.5 4971 FBgn0027101 1644.923333 56.32666667 86.10666667 0.004559483 0.133151852 0.08710127 -2 -4 -3 0.01 dme-miR-980-3p 6mer2-7 GCAGCT 4 1225832 1225837 - 4_1225832_1225837_- 1 1 1 0 Dyrk3 FBtr0100406|FBtr0100404|FBtr0100402 1225087|1225735|1225735 1226157|1226157|1226157 4 - 1225815 1225962 3'utr Dyrk3 FlyBase G57398.1 AAACGAGGAAAGAAAGCTTTGTTGACTAGCCGAAGATTATATACCCTTGCAGTTAATACCATGATTTAGTTATAGTTATAGAAGTTTACCTCTGAGATTTCTATGTTTTTCGAATGGTGGCTATTGCAGCTTAATCTATGTTTAAGTT 196 1225848 0.987880885 21 194 1785 0.991341991 2.058805487 0.246753247 0.147959184 0.277056277 196 1 1 229 4:1225815-1225962 6 Dyrk3 FBtr0100402|FBtr0100404|FBtr0100406 1225735|1225735|1225087 1226157|1226157|1226157 GCAGCT 6mer2-7 dme-miR-980-3p 4 - 1225815 1225922 3'utr Dyrk3 FlyBase G43374.1 ATACCCTTGCAGTTAATACCATGATTTAGTTATAGTTATAGAAGTTTACCTCTGAGATTTCTATGTTTTTCGAATGGTGGCTATTGCAGCTTAATCTATGTTTAAGTT 117 1225848 0.892711081 15 115 1099 0.988304094 1.926856709 0.339181287 0.333333333 0.543859649 117 1 1 169 4:1225815-1225922 6 107 4972 FBgn0027101 1644.923333 56.32666667 86.10666667 0.065048624 1.899633093 1.242644782 11 11 11 0.01 dme-bantam-3p 7mer-A1 GATCTCA 4 1225996 1226002 - 4_1225996_1226002_- 0.823349562 0.823349562 0.823349562 0 Dyrk3 FBtr0100406|FBtr0100404|FBtr0100402 1225087|1225735|1225735 1226157|1226157|1226157 4 - 1225977 1226135 3'utr Dyrk3 FlyBase G57399.1 AAGTCATTTAAGAGATTAGAGGCAGAACTTTATGTTGTTATCAAATTATTTGACAATGCACTGCCATACAAGTGATAAACTAAATAAGTCTTGGCCCTGATTTGCATTGCTATAGACGAAAATGGACAGAAAAGATCTCACGACGATAAATTAAATTAT 174 1226013 0.984954682 23 163 707 0.950980392 1.986771734 0.06372549 0.16091954 0.284313725 174 9 1 194 4:1225977-1226135 7 Dyrk3 FBtr0100402|FBtr0100404|FBtr0100406 1225735|1225735|1225087 1226157|1226157|1226157 GATCTCA 7mer-A1 dme-bantam-3p 4 - 1225980 1226049 3'utr Dyrk3 FlyBase G43376.1 AGTCTTGGCCCTGATTTGCATTGCTATAGACGAAAATGGACAGAAAAGATCTCACGACGATAAATTAAAT 64 1226013 0.979783003 7 62 189 0.981308411 2.021189299 0.14953271 0.484375 0.691588785 64 2 0 105 4:1225980-1226049 7 67 4973 FBgn0027101 1644.923333 56.32666667 86.10666667 0.040731382 1.18948988 0.778104676 11 11 11 0.01 dme-miR-33-5p 8mer-m1 CAATGCAC 4 1226075 1226082 - 4_1226075_1226082_- 0.607884395 0.594044787 0.600964591 0.009786075 Dyrk3 FBtr0100406|FBtr0100404|FBtr0100402 1225087|1225735|1225735 1226157|1226157|1226157 4 - 1225977 1226135 3'utr Dyrk3 FlyBase G57399.1 AAGTCATTTAAGAGATTAGAGGCAGAACTTTATGTTGTTATCAAATTATTTGACAATGCACTGCCATACAAGTGATAAACTAAATAAGTCTTGGCCCTGATTTGCATTGCTATAGACGAAAATGGACAGAAAAGATCTCACGACGATAAATTAAATTAT 174 1226079 0.984954682 23 163 707 0.950980392 1.986771734 0.06372549 0.16091954 0.284313725 174 9 1 194 4:1225977-1226135 8 Dyrk3 FBtr0100402|FBtr0100404|FBtr0100406 1225735|1225735|1225087 1226157|1226157|1226157 CAATGCAC 8mer-m1 dme-miR-33-5p 4 - 1226053 1226140 3'utr Dyrk3 FlyBase G43376.2 GTAATAAGTCATTTAAGAGATTAGAGGCAGAACTTTATGTTGTTATCAAATTATTTGACAATGCACTGCCATACAAGTGATAAACTAA 46 1226079 0.830195631 7 42 231 0.950617284 1.58546073 0.098765432 0.456521739 0.691358025 46 3 1 77 4:1226053-1226140 8 43.5 4974 FBgn0027101 1644.923333 56.32666667 86.10666667 0.026445001 0.772280743 0.505187365 -3 -3 -3 0.01 dme-miR-276a-3p 8mer-A1 AGTTCCTA 4 142899 142906 + 4_142899_142906_+ 0.637906983 0.637906983 0.637906983 0 CG32000 FBtr0089451|FBtr0089448|FBtr0089449|FBtr0333161|FBtr0113417 142794|142794|142794|142794|142794 143123|143123|143123|143123|143123 4 + 142850 143089 3'utr CG32000 FlyBase G56253.1 TTAGGAATTTCCATTATTAATACAGTAGAAAATGTAGGCAAAATTATTTAGTTCCTATTTAGTTTTTTTAGTAATCTTAGTATTTCTAATTGTACTTACATCAAAGATAACTTTGTATTAGCTATGAACACTTTTGTCTTTCTATGTTTAAAACGGCGTTGTTTCTTGATTATAATTAAGTGTTTGATGTTTATATACATAAGCAAAAATTCATATAGGCTGTATAATAAGCATTGGAGT 206 142897 0.934845437 41 188 2096 0.92519685 1.893946608 0.165354331 0.175609756 0.334645669 205 17 2 235 4:142850-143089 8 CG32000 FBtr0089451|FBtr0113417|FBtr0333161|FBtr0089449|FBtr0089448 142794|142794|142794|142794|142794 143123|143123|143123|143123|143123 AGTTCCTA 8mer-A1 dme-miR-276a-3p 4 + 142845 143032 3'utr CG32000 FlyBase G42466.1 TACTTTTAGGAATTTCCATTATTAATACAGTAGAAAATGTAGGCAAAATTATTTAGTTCCTATTTAGTTTTTTTAGTAATCTTAGTATTTCTAATTGTACTTACATCAAAGATAACTTTGTATTAGCTATGAACACTTTTGTCTTTCTATGTTTAAAACGGCGTTGTTTCTTGATTATAATTAAGTGT 105 142897 0.992228598 31 98 1136 0.944099379 2.181843588 0.198757764 0.40952381 0.614906832 105 9 0 152 4:142845-143032 8 41.5 4975 FBgn0052000 5598.68 138.82 213.5633333 0.007412462 0.298948278 0.194321747 2 2 2 0.01 dme-miR-252-5p 7mer-m8 GTACTTA 4 142941 142947 + 4_142941_142947_+ 0.588299917 0.588299917 0.588299917 0 CG32000 FBtr0089451|FBtr0089448|FBtr0089449|FBtr0333161|FBtr0113417 142794|142794|142794|142794|142794 143123|143123|143123|143123|143123 4 + 142850 143089 3'utr CG32000 FlyBase G56253.1 TTAGGAATTTCCATTATTAATACAGTAGAAAATGTAGGCAAAATTATTTAGTTCCTATTTAGTTTTTTTAGTAATCTTAGTATTTCTAATTGTACTTACATCAAAGATAACTTTGTATTAGCTATGAACACTTTTGTCTTTCTATGTTTAAAACGGCGTTGTTTCTTGATTATAATTAAGTGTTTGATGTTTATATACATAAGCAAAAATTCATATAGGCTGTATAATAAGCATTGGAGT 206 142940 0.934845437 41 188 2096 0.92519685 1.893946608 0.165354331 0.175609756 0.334645669 205 17 2 235 4:142850-143089 7 CG32000 FBtr0089451|FBtr0113417|FBtr0333161|FBtr0089449|FBtr0089448 142794|142794|142794|142794|142794 143123|143123|143123|143123|143123 GTACTTA 7mer-m8 dme-miR-252-5p 4 + 142845 143032 3'utr CG32000 FlyBase G42466.1 TACTTTTAGGAATTTCCATTATTAATACAGTAGAAAATGTAGGCAAAATTATTTAGTTCCTATTTAGTTTTTTTAGTAATCTTAGTATTTCTAATTGTACTTACATCAAAGATAACTTTGTATTAGCTATGAACACTTTTGTCTTTCTATGTTTAAAACGGCGTTGTTTCTTGATTATAATTAAGTGT 105 142940 0.992228598 31 98 1136 0.944099379 2.181843588 0.198757764 0.40952381 0.614906832 105 9 0 152 4:142845-143032 7 28.5 4976 FBgn0052000 5598.68 138.82 213.5633333 0.005090486 0.20530183 0.133449874 1 1 1 0.01 dme-miR-980-5p 8mer-m1 GAAAAACT 4 177919 177926 - 4_177919_177926_- 0.607906106 0.607906106 0.607906106 0 Arl4 FBtr0333677 177436 178817 4 - 177893 177994 intron-3'utr Arl4 FlyBase G56733.1 AGGGTGTTCCCGTTCTGATACTAGCAAATAAACAGGATCTGCCCAACGCTTGTGGTGCAATGGAACTGGAAAAACTTTTAGGACTGAACGAACTTTACAACC 21 177917 0.972408134 11 20 117 0.956521739 1.342422681 0.130434783 0.095238095 0.173913043 21 1 0 22 4:177893-177994 8 Arl4 FBtr0333677 177436 178817 GAAAAACT 8mer-m1 dme-miR-980-5p 4 - 177898 177952 3'utr Arl4 FlyBase G42857.1 CCAACGCTTGTGGTGCAATGGAACTGGAAAAACTTTTAGGACTGAACGAACTTTA 23 177917 0.694296884 6 16 100 0.727272727 0.77815125 0.090909091 0.347826087 0.545454545 23 6 3 24 4:177898-177952 8 16.5 4977 FBgn0039889 1176.36 144.06 220.9733333 0.014026318 0.11453561 0.074669643 -9 -9 -9 0.01 dme-miR-999-3p 6mer3-8 AGTTAA 4 196970 196975 - 4_196970_196975_- 0.999978694 1 0.999989347 1.51E-05 CG31998 FBtr0308249 196673 197877 4 - 196912 197077 3'utr CG31998 FlyBase G56757.2 GCTTATAAAAATAAAAAAATTCTTAAGACTACAACAACCTAAATTCGTTTAATATAAGTTAAAAGCCTGTTACAATTAAACGTTAATTACATAGTACTGATTAGTTAAGGGTATTGCATTTTCTATTGTTAAATCTTCCAAAATATACGGATCCTTATTAATAATT 400 196964 0.869040397 36 373 3310 0.942184154 1.865301426 0.143468951 0.1475 0.269807281 400 22 5 440 4:196912-197077 6 CG31998 FBtr0308249 196673 197877 AGTTAA 6mer3-8 dme-miR-999-3p 4 - 196892 197071 3'utr CG31998 FlyBase G42876.1 AAAAATAAAAAAATTCTTAAGACTACAACAACCTAAATTCGTTTAATATAAGTTAAAAGCCTGTTACAATTAAACGTTAATTACATAGTACTGATTAGTTAAGGGTATTGCATTTTCTATTGTTAAATCTTCCAAAATATACGGATCCTTATTAATAATTATATTTAGGTGTTCAATTGT 276 197005 0.986992216 33 258 2251 0.935866983 2.118374967 0.173396675 0.376811594 0.591448931 276 25 2 394 4:196892-197071 6 151.5 4978 FBgn0051998 3188.316667 75.81333333 116.5333333 0.047517237 1.99832923 1.300057208 -11 30 9.5 0.01 dme-miR-184-5p 6mer2-7 GATAAG 4 197149 197154 - 4_197149_197154_- 1 0.999999995 0.999999997 0 CG31998 FBtr0308249 196673 197877 4 - 197137 197191 3'utr CG31998 FlyBase G56758.1 TTTAAAGTTCATAAAAGAAATATTGGTTTTCATGTAAGATAAGTATTTTAAAAAG 14 197159 0.988962131 6 12 117 0.941176471 0.903089987 0.176470588 0.214285714 0.352941176 14 0 1 16 4:197137-197191 6 CG31998 FBtr0308249 196673 197877 GATAAG 6mer2-7 dme-miR-184-5p 4 - 197131 197169 3'utr CG31998 FlyBase G42878.1 TTGGTTTTCATGTAAGATAAGTATTTTAAAAAGGCCGTA 8 197159 0.977043385 2 8 71 1 1 0.2 0.25 0.4 8 0 0 10 4:197131-197169 6 9.5 4979 FBgn0051998 3188.316667 75.81333333 116.5333333 0.002979629 0.125307773 0.081521739 5 5 5 0.01 dme-miR-33-5p 6mer2-7 AATGCA 4 197359 197364 - 4_197359_197364_- 1 1 1 0 CG31998 FBtr0308249 196673 197877 4 - 197301 197417 3'utr CG31998 FlyBase G56759.1 TAATAATGTAACATACTGATTAAATTTATTATAAAAAAGTATGCGGTCCGATTAATGCAGGATACGAACTTGAAAAATTAAATATATAACATGATATTTTTAGATTATGATTTAAAA 41 197362 0.841691435 14 41 252 1 1.698970004 0.18 0.170731707 0.32 41 0 0 50 4:197301-197417 6 CG31998 FBtr0308249 196673 197877 AATGCA 6mer2-7 dme-miR-33-5p 4 - 197339 197412 3'utr CG31998 FlyBase G42879.1 ATGTAACATACTGATTAAATTTATTATAAAAAAGTATGCGGTCCGATTAATGCAGGATACGAACTTGAAAAATT 27 197362 0.953208813 5 26 130 1 1.568201724 0.324324324 0.333333333 0.513513514 27 0 0 37 4:197339-197412 6 26 4980 FBgn0051998 3188.316667 75.81333333 116.5333333 0.008154773 0.342947591 0.223112128 -2 -2 -2 0.01 dme-miR-14-3p 7mer-m8 AAGACTG 4 212848 212854 + 4_212848_212854_+ 0.671795832 0.671795775 0.671795803 0 Crk FBtr0304871|FBtr0345065|FBtr0345064 212179|211892|212726 213165|213165|213165 4 + 212792 212878 3'utr Crk FlyBase G56261.1 GAAAACTACCTGCATACGCCCGCGTAAAACAGTCAAGGGTCCCTAACGCATACGATAAGACTGCATTAAAATTGGAAATAGGTGACA 126 212847 0.919134827 9 108 609 0.873417722 1.838849091 0.03164557 0.222222222 0.379746835 126 19 1 138 4:212792-212878 7 Crk FBtr0304871|FBtr0345065|FBtr0345064 212179|211892|212726 213165|213165|213165 AAGACTG 7mer-m8 dme-miR-14-3p 4 + 212827 212867 3'utr Crk FlyBase G42475.1 AGGGTCCCTAACGCATACGATAAGACTGCATTAAAATTGGA 68 212847 0.775801572 6 58 303 0.846153846 1.467361417 0 0.352941176 0.576923077 68 14 2 88 4:212827-212867 7 91.5 4981 FBgn0024811 1520.34 187.5933333 288.2066667 0.060183906 0.487757205 0.317480512 1 1 1 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 4 212980 212986 + 4_212980_212986_+ 0.521223855 0.521223855 0.521223855 0 Crk FBtr0304871|FBtr0345065|FBtr0345064 212179|211892|212726 213165|213165|213165 4 + 212892 213006 3'utr Crk FlyBase G56262.1 TAAAACAAACATTAATGGGCAATGGGAGGGAGAATTAAATGGAAAAAATGGTCATTTTCCCTTCACGCACGTTGAATTTGTCGATGATTGTGATTTAAGCAAAAACTCCACAGAA 117 212980 0.952349745 11 109 972 0.944827586 1.291622527 0.379310345 0.179487179 0.337931034 117 2 6 137 4:212892-213006 7 Crk FBtr0304871|FBtr0345065|FBtr0345064 212179|211892|212726 213165|213165|213165 TGTGATT 7mer-m1 dme-miR-308-3p 4 + 212938 213102 stop_codon Crk FlyBase G42477.1 AATGGTCATTTTCCCTTCACGCACGTTGAATTTGTCGATGATTGTGATTTAAGCAAAAACTCCACAGAAATATGCTAAATAGGAAGGAATGGAAGGAATTTCTTTTGATAATTTTGATTTTTGAGCTAATTGTATGATTAATAAGTTGTGCATACCAATTGTTAA 86 212986 0.986669183 16 85 727 0.992248062 2.10720997 0.310077519 0.360465116 0.573643411 86 1 0 128 4:212938-213102 7 86.5 4982 FBgn0024811 1520.34 187.5933333 288.2066667 0.056895168 0.461103806 0.30013185 0 -6 -3 0.01 dme-miR-308-3p 7mer-m1 TGTGATT 4 241000 241006 + 4_241000_241006_+ 0.443131018 0.443131018 0.443131018 0 CG1674 FBtr0089119 240876 241318 4 + 240910 241026 5'utr CG1674 FlyBase G56268.1 ACACTGATTGCAACTTTTAGTACAGTGGTCAAGAAAAATCTCATTAGTCTAACTCTCCACTATAACAGGGATACCCCGTTTCCCATTGTATGTGATTTTTGTTAAAAATTTAAGTTT 46 240996 0.992683486 13 43 501 0.924528302 1.389166084 0.20754717 0.152173913 0.264150943 46 3 1 49 4:240910-241026 7 CG1674 FBtr0089119 240876 241318 TGTGATT 7mer-m1 dme-miR-308-3p 4 + 240974 241015 5'utr CG1674 FlyBase G42483.1 ACAGGGATACCCCGTTTCCCATTGTATGTGATTTTTGTTAAA 25 240996 0.786598585 4 22 313 0.794117647 1.431363764 0.205882353 0.32 0.5 25 7 0 27 4:240974-241015 7 27.5 4983 FBgn0039897 839.9 47.17666667 72.43333333 0.032741993 0.582915283 0.379659457 4 4 4 0.01 dme-miR-305-5p 8mer-m1 AGTACAAT 4 280162 280169 - 4_280162_280169_- 0.570363044 0.570363043 0.570363043 0 Syt7 FBtr0089134 278683 280425 4 - 280152 280210 3'utr Syt7 FlyBase G56793.1 AAACATTGGCAGGACATGATCTCAAAGCCCAGACAAACTGTAGTACAATGGCATCGCTT 6 280194 0.899832612 3 6 26 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 4:280152-280210 8 Syt7 FBtr0089134 278683 280425 AGTACAAT 8mer-m1 dme-miR-305-5p 4 - 280151 280210 3'utr Syt7 FlyBase G42902.1 AAACATTGGCAGGACATGATCTCAAAGCCCAGACAAACTGTAGTACAATGGCATCGCTTA 9 280194 0.942961179 4 9 40 1 1.041392685 0 0.111111111 0.272727273 9 0 0 11 4:280151-280210 8 2 4984 FBgn0039900 11 0.483333333 0.74 0.181818182 4.137931034 2.702702703 25 25 25 0.01 dme-bantam-3p 8mer-A1 TGATCTCA 4 280187 280194 - 4_280187_280194_- 0.631136385 0.631136385 0.631136385 0 Syt7 FBtr0089134 278683 280425 4 - 280152 280210 3'utr Syt7 FlyBase G56793.1 AAACATTGGCAGGACATGATCTCAAAGCCCAGACAAACTGTAGTACAATGGCATCGCTT 6 280194 0.899832612 3 6 26 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 4:280152-280210 8 Syt7 FBtr0089134 278683 280425 TGATCTCA 8mer-A1 dme-bantam-3p 4 - 280151 280210 3'utr Syt7 FlyBase G42902.1 AAACATTGGCAGGACATGATCTCAAAGCCCAGACAAACTGTAGTACAATGGCATCGCTTA 9 280194 0.942961179 4 9 40 1 1.041392685 0 0.111111111 0.272727273 9 0 0 11 4:280151-280210 8 4.5 4985 FBgn0039900 11 0.483333333 0.74 0.409090909 9.310344828 6.081081081 0 0 0 0.01 dme-miR-252-5p 6mer3-8 GTACTT 4 310320 310325 + 4_310320_310325_+ 1 1 1 0 Rad23 FBtr0333679 310188 310822 4 + 310206 310340 3'utr Rad23 FlyBase G56282.1 AAGTTATGCAAATAACACCGGAAGCGTTACATTTAAAGTTAGATGTTCTTAAATTAAATGTAAAATGTCGATCATAAAAATTCTTTTATATTCTTTTAATACCGTCGGCGTATTGTACTTGTTATTTGTTAAAAA 38 310319 0.988544205 14 38 337 1 1.662757832 0.130434783 0.131578947 0.282608696 38 0 0 46 4:310206-310340 6 Rad23 FBtr0333679 310188 310822 GTACTT 6mer3-8 dme-miR-252-5p 4 + 310301 310341 3'utr Rad23 FlyBase G42496.1 TTAATACCGTCGGCGTATTGTACTTGTTATTTGTTAAAAAT 15 310319 0.735361194 6 12 167 0.866666667 0.937852093 0.033333333 0.733333333 0.866666667 15 2 2 26 4:310301-310341 6 19.5 4986 FBgn0026777 1534.613333 122.59 187.9666667 0.012706784 0.159066808 0.103741798 1 1 1 0.01 dme-miR-7-5p 6mer3-8 GTCTTC 4 310403 310408 + 4_310403_310408_+ 1 1 1 0 Rad23 FBtr0333679 310188 310822 4 + 310361 310454 3'utr Rad23 FlyBase G56283.1 GAGTTACGATGTCATTTTTACTAAATATTTCACCACGACATTGTCTTCAGCATAAGACTGCAAATGTCTACAAATTTATCTGTGCCAATCCATG 43 310401 0.978924784 10 43 294 1 1.69019608 0.020408163 0.139534884 0.244897959 43 0 0 49 4:310361-310454 6 Rad23 FBtr0333679 310188 310822 GTCTTC 6mer3-8 dme-miR-7-5p 4 + 310360 310429 3'utr Rad23 FlyBase G42497.1 AGAGTTACGATGTCATTTTTACTAAATATTTCACCACGACATTGTCTTCAGCATAAGACTGCAAATGTCT 40 310401 0.977940811 6 37 248 0.929824561 1.423245874 0.210526316 0.325 0.526315789 40 3 1 53 4:310360-310429 6 38 4987 FBgn0026777 1534.613333 122.59 187.9666667 0.024761938 0.309976344 0.202163504 2 2 2 0.01 dme-miR-304-5p 6mer2-7 GAGATT 4 311138 311143 - 4_311138_311143_- 1 1 1 0 Zip102B FBtr0089133|FBtr0340652|FBtr0340653|FBtr0333681 310928|310928|310928|310928 312789|312789|312789|312789 4 - 311063 311237 3'utr Zip102B FlyBase G56795.1 TAATTCTTGTGTCTTTGAATCTACATTGAGTCAGGAAAGATTTATAATTGTAGCAACATTATAGAGGGGACCATAGCCATACATGAAACTATTAGAGATTTATTAATATTAAAGTGTAGAATTCTTTGCATTAATAATGCATATTACAATGTTCGAGTTTTATATTTGTCGTATT 29 311157 0.989731084 11 23 231 0.84375 1.130333768 0.15625 0.103448276 0.1875 29 4 1 27 4:311063-311237 6 Zip102B FBtr0333681|FBtr0340653|FBtr0340652|FBtr0089133 310928|310928|310928|310928 312789|312789|312789|312789 GAGATT 6mer2-7 dme-miR-304-5p 4 - 311110 311180 3'utr Zip102B FlyBase G42903.1 ATTATAGAGGGGACCATAGCCATACATGAAACTATTAGAGATTTATTAATATTAAAGTGTAGAATTCTTTG 12 311153 0.980001397 8 11 84 0.8125 1.113943352 0.125 0.25 0.4375 12 3 0 13 4:311110-311180 6 9 4988 FBgn0039902 844.14 35.44333333 54.17 0.010661739 0.253926455 0.166143622 14 10 12 0.01 dme-miR-190-5p 6mer2-7 CATATC 4 311646 311651 - 4_311646_311651_- 1 1 1 0 Zip102B FBtr0089133|FBtr0340652|FBtr0340653|FBtr0333681 310928|310928|310928|310928 312789|312789|312789|312789 4 - 311607 311660 3'utr Zip102B FlyBase G56798.1 AGGTTGCGTCATATCGATATGAGAAAGTGTACATCAATCCGGTAGTTTGTGTGT 6 311633 0.969406663 3 6 40 1 0.954242509 0.222222222 0.333333333 0.555555556 6 0 0 9 4:311607-311660 6 Zip102B FBtr0333681|FBtr0340653|FBtr0340652|FBtr0089133 310928|310928|310928|310928 312789|312789|312789|312789 CATATC 6mer2-7 dme-miR-190-5p 4 - 311605 311662 3'utr Zip102B FlyBase G42904.1 CTAGGTTGCGTCATATCGATATGAGAAAGTGTACATCAATCCGGTAGTTTGTGTGTAA 5 311633 0.97528182 2 5 43 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 4:311605-311662 6 3.5 4989 FBgn0039902 844.14 35.44333333 54.17 0.004146232 0.098749177 0.064611409 -18 -18 -18 0.01 dme-bantam-3p 7mer-m8 TGATCTC 4 311832 311838 - 4_311832_311838_- 0.661615243 0.661615243 0.661615243 0 Zip102B FBtr0089133|FBtr0340652|FBtr0340653|FBtr0333681 310928|310928|310928|310928 312789|312789|312789|312789 4 - 311805 311917 3'utr Zip102B FlyBase G56799.2 GTTTTTGACTATGACGAGTCTGCTGGCGAAATTCGGCGCCGACTTGCGTACTATTCCTTTTCGTTGCCATTCCGAAACCTGATCTCGATTCTCTTCTCCTTGGGCACAATCGA 142 311838 0.854386643 19 128 1086 0.890243902 1.01822482 0.164634146 0.11971831 0.237804878 142 5 13 146 4:311805-311917 7 Zip102B FBtr0333681|FBtr0340653|FBtr0340652|FBtr0089133 310928|310928|310928|310928 312789|312789|312789|312789 TGATCTC 7mer-m8 dme-bantam-3p 4 - 311809 311902 3'utr Zip102B FlyBase G42906.1 GAGTCTGCTGGCGAAATTCGGCGCCGACTTGCGTACTATTCCTTTTCGTTGCCATTCCGAAACCTGATCTCGATTCTCTTCTCCTTGGGCACAA 92 311838 0.98512193 12 85 691 0.907142857 1.404833717 0.114285714 0.391304348 0.6 92 9 4 127 4:311809-311902 7 107.5 4990 FBgn0039902 844.14 35.44333333 54.17 0.127348544 3.033010439 1.984493262 0 0 0 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT 4 312301 312307 - 4_312301_312307_- 0.658999527 0.658999527 0.658999527 0 Zip102B FBtr0089133|FBtr0340652|FBtr0340653|FBtr0333681 310928|310928|310928|310928 312789|312789|312789|312789 4 - 312266 312353 3'utr Zip102B FlyBase G56801.1 AGTTTACGTTCTCAGAATGGTAGTAAAAAGTAAGAGACGGTTTAAAGGCAGCTTGGCAATGTCACCATTGGTTTACTGGATAACGTCT 60 312300 0.962742996 10 59 297 0.969230769 1.799340549 0.307692308 0.083333333 0.153846154 60 2 0 63 4:312266-312353 7 Zip102B FBtr0333681|FBtr0340653|FBtr0340652|FBtr0089133 310928|310928|310928|310928 312789|312789|312789|312789 GGCAGCT 7mer-m8 dme-miR-980-3p 4 - 312249 312363 3'utr Zip102B FlyBase G42907.1 AACAATGGATAGTTTACGTTCTCAGAATGGTAGTAAAAAGTAAGAGACGGTTTAAAGGCAGCTTGGCAATGTCACCATTGGTTTACTGGATAACGTCTTCTGTTACGGCCTTAGA 56 312300 0.966890266 9 53 288 0.952380952 1.903089987 0.30952381 0.392857143 0.595238095 56 4 0 80 4:312249-312363 7 51.5 4991 FBgn0039902 844.14 35.44333333 54.17 0.061008837 1.453023606 0.950710725 -7 -7 -7 0.01 dme-miR-1006-3p 7mer-A1 GAATTTA 4 312652 312658 - 4_312652_312658_- 0.823349562 0.823349562 0.823349562 0 Zip102B FBtr0089133|FBtr0340652|FBtr0340653|FBtr0333681 310928|310928|310928|310928 312789|312789|312789|312789 4 - 312643 312758 3'utr Zip102B FlyBase G56804.1 AAGATGAAGTAAAAGTTAAGGGATATTAAGCTATAAATATATTGGGTTTAATTTCTCGGATATACAATTATTAACATTAAGTGCTTTGCACAAAGATTTTGAATTTAATGAATTGT 21 312660 0.855593012 12 20 169 0.965517241 1.146128036 0.172413793 0.285714286 0.482758621 21 0 1 28 4:312643-312758 7 Zip102B FBtr0333681|FBtr0340653|FBtr0340652|FBtr0089133 310928|310928|310928|310928 312789|312789|312789|312789 GAATTTA 7mer-A1 dme-miR-1006-3p 4 - 312632 312695 3'utr Zip102B FlyBase G42909.1 ACAATTATTAACATTAAGTGCTTTGCACAAAGATTTTGAATTTAATGAATTGTCGCATGAAAGT 16 312660 0.988502865 8 15 133 0.954545455 1.322219295 0.090909091 0.3125 0.5 16 1 0 21 4:312632-312695 7 10 4992 FBgn0039902 844.14 35.44333333 54.17 0.011846376 0.282140506 0.184604024 2 2 2 0.01 dme-miR-1003-3p 6mer2-7 TGTGAG 4 321250 321255 + 4_321250_321255_+ 1 1 1 0 CG32850 FBtr0089123 319798 321385 4 + 321235 321270 5'utr CG32850 FlyBase G56292.1 TTGTAAATTGTGACTTGTGAGCCAACCACATTAGCA 34 321249 0.730188489 6 33 222 0.973684211 1.568201724 0.315789474 0.117647059 0.210526316 34 1 0 37 4:321235-321270 6 CG32850 FBtr0089123 319798 321385 TGTGAG 6mer2-7 dme-miR-1003-3p 4 + 321236 321304 5'utr CG32850 FlyBase G42505.1 TGTAAATTGTGACTTGTGAGCCAACCACATTAGCACTATCAAATTTCCATGTCTCTGCCACTGAGTATA 23 321249 0.750036572 5 22 161 0.956521739 1.643452676 0.347826087 0.695652174 0.847826087 23 2 0 44 4:321236-321304 6 26 4993 FBgn0052850 7774.166667 410.5266667 632.2966667 0.00334441 0.063333279 0.041119938 1 1 1 0.01 dme-miR-1008-3p 8mer-A1 AGCTGTGA 4 329071 329078 - 4_329071_329078_- 0.634260873 0.643533908 0.63889739 0.006557001 PMCA FBtr0304046|FBtr0304049|FBtr0300555|FBtr0300554|FBtr0304047|FBtr0300557|FBtr0300556|FBtr0304048 328814|328814|328814|328814|328814|328814|328814|328191 329206|329206|331564|329206|329206|329206|329206|329206 4 - 329056 329094 3'utr PMCA FlyBase G56818.1 AGGATAACAGCAATGTAGCTGTGAATTGGTTAAAAAGCA 11 329080 0.762025845 4 10 69 1 1.176091259 0.2 0.272727273 0.466666667 11 0 0 15 4:329056-329094 8 PMCA FBtr0304047|FBtr0300554|FBtr0300556|FBtr0300557|FBtr0304048|FBtr0304046|FBtr0304049|FBtr0300555 328814|328814|328814|328814|328191|328814|328814|328814 329206|329206|329206|329206|329206|329206|329206|331564 AGCTGTGA 8mer-A1 dme-miR-1008-3p 4 - 329018 329110 3'utr PMCA FlyBase G42920.1 AAAAAAGGTTTTGTTCAGGATAACAGCAATGTAGCTGTGAATTGGTTAAAAAGCATTTTGTAATTCAGCAAAAATAATCCGTAAAAAAAATGT 11 329080 0.97955405 7 11 72 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 4:329018-329110 8 8.5 4994 FBgn0259214 5766.78 152.7933333 233.7433333 0.001473959 0.055630699 0.036364674 2 2 2 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 4 330470 330475 - 4_330470_330475_- 1 1 1 0 PMCA FBtr0304050 329515 331564 4 - 330452 330502 3'utr PMCA FlyBase G56821.1 AAGAATTAAAAAATTAGTACAGTAAAGCCAAAGTGTTTGTAGTGATCCATT 5 330466 0.974652513 3 3 26 0.875 0.84509804 0.125 0.4 0.625 5 1 0 7 4:330452-330502 6 PMCA FBtr0304050 329515 331564 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 4 - 330442 330482 3'utr PMCA FlyBase G42922.1 AGTAAAGCCAAAGTGTTTGTAGTGATCCATTTATAGCGGCA 6 330466 0.955937839 4 5 36 0.857142857 0.77815125 0 0.166666667 0.285714286 6 1 0 6 4:330442-330482 6 3.5 4995 FBgn0259214 5766.78 152.7933333 233.7433333 0.000606924 0.022906759 0.014973689 -9 -9 -9 0.01 dme-miR-33-5p 6mer3-8 CAATGC 4 330999 331004 - 4_330999_331004_- 0.999407756 1 0.999703878 0.000418749 PMCA FBtr0304050|FBtr0300558 329515|330854 331564|331564 4 - 330876 331060 5'utr PMCA FlyBase G56822.1 CGAACTTCGTTGTTCAGTATATTAACCTCCGCTTTCAAATTAACATCACAAAATTTCAATGCCGTTCTTTTCTATATCTAATAATGATATATTTAAACTTTTGTACATTTATACTGAAAATGTCTGTAATAATTAAATTAATTATATATTTAAATATTCAAATATGTTGGTCCATCTACTAGGAA 74 331021 0.973905893 16 68 620 0.906976744 1.290034611 0.046511628 0.135135135 0.255813953 74 5 3 78 4:330876-331060 6 PMCA FBtr0300558|FBtr0304050 330854|329515 331564|331564 CAATGC 6mer3-8 dme-miR-33-5p 4 - 330981 331053 5'utr PMCA FlyBase G42924.1 CGTTGTTCAGTATATTAACCTCCGCTTTCAAATTAACATCACAAAATTTCAATGCCGTTCTTTTCTATATCTA 14 331021 0.984723428 6 13 105 0.947368421 1.255272505 0.052631579 0.357142857 0.526315789 14 1 0 18 4:330981-331053 6 8 4996 FBgn0259214 5766.78 152.7933333 233.7433333 0.001387256 0.052358305 0.034225575 17 17 17 0.01 dme-miR-283-5p 7mer-m1 GATATTT 4 331381 331387 - 4_331381_331387_- 0.765586663 0.765586663 0.765586663 0 PMCA FBtr0304050|FBtr0300558 329515|330854 331564|331564 4 - 331292 331414 5'utr-coding PMCA FlyBase G56824.1 AGTATGTTAAAACAAAGGTGAATGCGCGATATTTTTTTGATTAAACTTTTAACTCTAAAGAGGCAAACTTAAATTTATTAATCTCATAAATACAAATGTGCATGTATAGTAAGCGATTTCGAA 49 331392 0.98055871 11 48 333 0.964285714 1.73239376 0.053571429 0.102040816 0.214285714 49 2 0 54 4:331292-331414 7 PMCA FBtr0300558|FBtr0304050 330854|329515 331564|331564 GATATTT 7mer-m1 dme-miR-283-5p 4 - 331379 331411 5'utr-coding PMCA FlyBase G42927.1 ATGTTAAAACAAAGGTGAATGCGCGATATTTTT 11 331392 0.885049824 3 11 54 1 1.176091259 0.066666667 0.272727273 0.466666667 11 0 0 15 4:331379-331411 7 22 4997 FBgn0259214 5766.78 152.7933333 233.7433333 0.003814954 0.14398534 0.094120331 5 5 5 0.01 dme-miR-14-3p 6mer2-7 AGACTG 4 331503 331508 - 4_331503_331508_- 1 1 1 0 PMCA FBtr0300555|FBtr0304050|FBtr0300558 328814|329515|330854 331564|331564|331564 4 - 331448 331535 5'utr PMCA FlyBase G56825.1 TGGTTAAGCCTATAACAATTCCAAATTAGACTGGTTATGCTTCTCAAAGCGCAATCCCAAATCAATGGCCCAGCTCAATGTGGCTATT 446 331510 0.911479992 14 436 3056 0.978873239 2.1430148 0.001760563 0.210762332 0.38028169 446 9 3 556 4:331448-331535 6 PMCA FBtr0300558|FBtr0300555|FBtr0304050 330854|328814|329515 331564|331564|331564 AGACTG 6mer2-7 dme-miR-14-3p 4 - 331461 331609 stop_codon PMCA FlyBase G42928.1 ATCGAAACTAAACATTCCAATGGACAGAATGAGACTCGAATTTAAATGGTTTTAGTGGGTGTTTGCACCAAATATGGTTAAGCCTATAACAATTCCAAATTAGACTGGTTATGCTTCTCAAAGCGCAATCCCAAATCAATGGCCCAGCT 379 331510 0.972817175 14 369 2212 0.980506823 2.099507994 0.097465887 0.295514512 0.479532164 379 7 3 503 4:331461-331609 6 351 4998 FBgn0259214 5766.78 152.7933333 233.7433333 0.060865856 2.297220647 1.501647106 2 2 2 0.01 dme-miR-965-3p 6mer3-8 TACGCT 4 372497 372502 + 4_372497_372502_+ 1 1 1 0 Hcf FBtr0334479|FBtr0345284|FBtr0089126|FBtr0089125|FBtr0307379 372391|372391|372391|372391|372391 372784|375554|372784|374973|372784 4 + 372451 372540 3'utr Hcf FlyBase G56327.1 AAAGTATGCTATTAGCTTTTCCGTTTTTACAGCTTCCAATAGACTTTACGCTGAATTCAAAATGATTACAACGAAACTTGAATATTATTG 56 372490 0.794175169 8 55 386 0.98630137 1.857332496 0.150684932 0.196428571 0.383561644 56 1 0 72 4:372451-372540 6 Hcf FBtr0089125|FBtr0307379|FBtr0345284|FBtr0089126|FBtr0334479 372391|372391|372391|372391|372391 374973|372784|375554|372784|372784 TACGCT 6mer3-8 dme-miR-965-3p 4 + 372476 372547 3'utr Hcf FlyBase G42525.1 TTTACAGCTTCCAATAGACTTTACGCTGAATTCAAAATGATTACAACGAAACTTGAATATTATTGCTATTAA 30 372491 0.980375031 7 28 199 0.956521739 1.643452676 0.152173913 0.333333333 0.565217391 30 2 0 44 4:372476-372547 6 38 4999 FBgn0039904 2694.423333 58.45333333 89.53333333 0.014103203 0.650091241 0.424422934 7 6 6.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 4 372718 372723 + 4_372718_372723_+ 1 1 1 0 Hcf FBtr0334479|FBtr0345284|FBtr0089126|FBtr0089125|FBtr0307379 372391|372391|372391|372391|372391 372784|375554|372784|374973|372784 4 + 372677 372729 3'utr Hcf FlyBase G56329.1 AATAATATATAATATTTTCCTTATCATGAACTCTACAACACTCTAGTGTATAT 12 372704 0.984352927 6 10 84 0.9375 0.875061263 0 0.166666667 0.375 12 0 1 15 4:372677-372729 6 Hcf FBtr0089125|FBtr0307379|FBtr0345284|FBtr0089126|FBtr0334479 372391|372391|372391|372391|372391 374973|372784|375554|372784|372784 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 4 + 372687 372727 3'utr Hcf FlyBase G42527.1 AATATTTTCCTTATCATGAACTCTACAACACTCTAGTGTAT 5 372697 0.982720845 4 4 30 1 0.903089987 0 0.4 0.625 5 0 0 8 4:372687-372727 6 4.5 5000 FBgn0039904 2694.423333 58.45333333 89.53333333 0.001670116 0.076984489 0.050260611 14 21 17.5 0.01 dme-miR-283-5p 6mer3-8 TGATAT 4 437024 437029 - 4_437024_437029_- 1 1 1 0 lgs FBtr0089111 436955 437385 4 - 436992 437046 3'utr lgs FlyBase G56864.1 TAAATGTAAAACGCTATTGATATATATTGCTCTCAACTGTATTGTAATCAATATT 10 437020 0.931312199 7 10 85 1 1.041392685 0.545454545 0.1 0.181818182 10 0 0 11 4:436992-437046 6 lgs FBtr0089111 436955 437385 TGATAT 6mer3-8 dme-miR-283-5p 4 - 436977 437031 3'utr lgs FlyBase G42952.1 ATTGATATATATTGCTCTCAACTGTATTGTAATCAATATTAAGAGAACTGTAAAT 6 437020 0.987856513 5 6 44 1 1 0.2 0.5 0.7 6 0 0 10 4:436977-437031 6 6 5001 FBgn0039907 1610.766667 36.50666667 56.17666667 0.003724934 0.164353543 0.10680591 -9 -9 -9 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 4 437069 437074 - 4_437069_437074_- 1 1 1 0 lgs FBtr0089111 436955 437385 4 - 437049 437096 3'utr lgs FlyBase G56865.1 TTAATATGTGCGCTGCTCTCTCTGTGTTAAATGAAATTAAAATATATA 111 437076 0.982241423 10 106 967 0.95035461 1.649983544 0.517730496 0.216216216 0.382978723 111 5 2 134 4:437049-437096 6 lgs FBtr0089111 436955 437385 TGTGTT 6mer3-8 dme-miR-317-3p 4 - 437056 437094 3'utr lgs FlyBase G42953.1 AATATGTGCGCTGCTCTCTCTGTGTTAAATGAAATTAAA 77 437076 0.738180252 6 69 679 0.900826446 2.037426498 0.52892562 0.402597403 0.619834711 77 12 0 109 4:437056-437094 6 94 5002 FBgn0039907 1610.766667 36.50666667 56.17666667 0.058357304 2.574872169 1.673292589 2 2 2 0.01 dme-miR-252-5p 7mer-m1 TACTTAG 4 437288 437294 - 4_437288_437294_- 0.702971752 0.702971752 0.702971752 0 lgs FBtr0089111 436955 437385 4 - 437225 437302 3'utr lgs FlyBase G56867.1 AGCTTATTTACTTAGGTGTTTTTACAACGGAGAAAATAAACTTTTGGATATGCAAATGATAACGTTGGAAACAACATA 10 437291 0.984303858 4 10 81 1 1.079181246 0.333333333 0.2 0.333333333 10 0 0 12 4:437225-437302 7 lgs FBtr0089111 436955 437385 TACTTAG 7mer-m1 dme-miR-252-5p 4 - 437227 437306 3'utr lgs FlyBase G42954.1 TTGAAGCTTATTTACTTAGGTGTTTTTACAACGGAGAAAATAAACTTTTGGATATGCAAATGATAACGTTGGAAACAACA 16 437291 0.985303602 5 16 133 1 1.301029996 0.3 0.25 0.4 16 0 0 20 4:437227-437306 7 8.5 5003 FBgn0039907 1610.766667 36.50666667 56.17666667 0.00527699 0.232834186 0.151308372 -3 -3 -3 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 4 453270 453276 + 4_453270_453276_+ 0.661615511 0.661615511 0.661615511 0 CaMKI FBtr0089067|FBtr0333670|FBtr0089069|FBtr0089063|FBtr0089065 453198|453198|453198|453198|453198 453947|453947|453947|453947|453947 4 + 453246 453349 3'utr CaMKI FlyBase G56343.1 ACATTTTTGAATTTTAACAATTGTTCTAGTCTAGTAAATATCTCGTACTAACGAATCCGATATAATTTCTCAATCGAAAATGCCAATCAAATAACATATAATGT 32 453268 0.98966367 8 30 286 0.952380952 1.602059991 0.119047619 0.1875 0.380952381 32 2 0 40 4:453246-453349 7 CaMKI FBtr0089065|FBtr0089063|FBtr0089069|FBtr0333670|FBtr0089067 453198|453198|453198|453198|453198 453947|453947|453947|453947|453947 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 4 + 453254 453284 3'utr CaMKI FlyBase G42538.1 GAATTTTAACAATTGTTCTAGTCTAGTAAAT 9 453269 0.611747169 5 7 75 0.75 1.079181246 0.4375 0.444444444 0.6875 9 4 0 12 4:453254-453284 7 18 5004 FBgn0016126 937.6466667 46.26 70.96333333 0.019196997 0.389105058 0.253652121 2 1 1.5 0.01 dme-miR-1012-3p 6mer3-8 TTGACT 4 453799 453804 + 4_453799_453804_+ 1 1 1 0 CaMKI FBtr0089067|FBtr0333670|FBtr0089069|FBtr0089063|FBtr0089065 453198|453198|453198|453198|453198 453947|453947|453947|453947|453947 4 + 453778 453827 3'utr CaMKI FlyBase G56346.1 TCTTAAGCAGATGATTTGGTGTTGACTGGAAATTTTTAGTATTAAGATGT 13 453799 0.963684023 8 9 124 0.75 0.602059991 0.25 0.153846154 0.3125 13 2 2 12 4:453778-453827 6 CaMKI FBtr0089065|FBtr0089063|FBtr0089069|FBtr0333670|FBtr0089067 453198|453198|453198|453198|453198 453947|453947|453947|453947|453947 TTGACT 6mer3-8 dme-miR-1012-3p 4 + 453782 453826 3'utr CaMKI FlyBase G42539.1 AAGCAGATGATTTGGTGTTGACTGGAAATTTTTAGTATTAAGATG 10 453797 0.643485661 7 9 99 0.944444444 1.230448921 0.388888889 0.5 0.722222222 10 1 0 17 4:453782-453826 6 10 5005 FBgn0016126 937.6466667 46.26 70.96333333 0.010664998 0.216169477 0.140917845 0 2 1 0.01 dme-bantam-3p 7mer-m8 TGATCTC 4 453914 453920 + 4_453914_453920_+ 0.661615243 0.661615243 0.661615243 0 CaMKI FBtr0089067|FBtr0333670|FBtr0089069|FBtr0089063|FBtr0089065 453198|453198|453198|453198|453198 453947|453947|453947|453947|453947 4 + 453875 453930 3'utr CaMKI FlyBase G56347.1 CTTTCTTGTAACAAATATATATATTAAACATCCCAAGCGTGATCTCCCCAAAGATT 32 453914 0.946817697 3 30 129 0.88372093 1.579783597 0.023255814 0.25 0.441860465 32 5 0 38 4:453875-453930 7 CaMKI FBtr0089065|FBtr0089063|FBtr0089069|FBtr0333670|FBtr0089067 453198|453198|453198|453198|453198 453947|453947|453947|453947|453947 TGATCTC 7mer-m8 dme-bantam-3p 4 + 453888 453934 3'utr CaMKI FlyBase G42540.1 AATATATATATTAAACATCCCAAGCGTGATCTCCCCAAAGATTATGT 24 453914 0.922171525 3 23 88 0.911764706 0.889301703 0.058823529 0.291666667 0.5 24 0 3 31 4:453888-453934 7 27 5006 FBgn0016126 937.6466667 46.26 70.96333333 0.028795495 0.583657588 0.380478181 0 0 0 0.01 dme-miR-980-3p 6mer3-8 GGCAGC 4 471331 471336 - 4_471331_471336_- 1 1 1 0 Asator FBtr0332906|FBtr0300344|FBtr0332905|FBtr0300342 469407|471284|471284|471284 472288|474884|472288|472288 4 - 471315 471354 3'utr Asator FlyBase G56907.1 ATTTAAAAATAAAGCGTTGGCAGCGATTGTTCTTAAAAAC 8 471337 0.794746052 3 8 51 1 0.954242509 0 0.125 0.222222222 8 0 0 9 4:471315-471354 6 Asator FBtr0332905|FBtr0300342|FBtr0332906|FBtr0300344 471284|471284|469407|471284 472288|472288|472288|474884 GGCAGC 6mer3-8 dme-miR-980-3p 4 - 471313 471346 3'utr Asator FlyBase G42985.1 ATAAAGCGTTGGCAGCGATTGTTCTTAAAAACAA 5 471337 0.950841207 3 5 28 1 0.903089987 0 0.4 0.625 5 0 0 8 4:471313-471346 6 6.5 5007 FBgn0039908 319.3933333 7.256666667 11.06333333 0.020351082 0.895728066 0.587526363 1 1 1 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 4 471683 471690 - 4_471683_471690_- 0.500120318 0.500120318 0.500120318 0 Asator FBtr0332906|FBtr0300344|FBtr0332905|FBtr0300342 469407|471284|471284|471284 472288|474884|472288|472288 4 - 471673 471716 3'utr Asator FlyBase G56909.1 AAAGTCATGGATTATGACACATTGCTGTACTTAACTACATTTTT 30 471691 0.736390248 6 29 224 0.942857143 1.51851394 0.114285714 0.133333333 0.257142857 30 2 0 33 4:471673-471716 8 Asator FBtr0332905|FBtr0300342|FBtr0332906|FBtr0300344 471284|471284|469407|471284 472288|472288|472288|474884 GTACTTAA 8mer-A1 dme-miR-252-5p 4 - 471679 471714 3'utr Asator FlyBase G42987.1 AGTCATGGATTATGACACATTGCTGTACTTAACTAC 35 471691 0.747449474 4 32 276 0.909090909 1.22184875 0.072727273 0.342857143 0.581818182 35 3 2 50 4:471679-471714 8 31.5 5008 FBgn0039908 319.3933333 7.256666667 11.06333333 0.098624476 4.340836013 2.847243146 1 1 1 0.01 dme-miR-2b-2-5p 6mer2-7 TGAAGA 4 537690 537695 + 4_537690_537695_+ 1 1 1 0 zfh2 FBtr0332913 536964 538373 4 + 537527 537752 3'utr zfh2 FlyBase G56437.1 TTTTGTTGCAACATGTTGTGACAAACGCGACAAGCCACGCTATTCATACAGCTAGACAAGATTCTGATGTTATTGCCGAAGGGAACTGTATTCTTAATTATGACACTAATGGTGGCGATTCCAAGAGTCATGTCCAGCATAATTTACCTAACGAAGTCGTTTCTGAAGATGCGCGAAAAATCGCTGGTAATCAGGAACTTATGCAGCAACTTTTTAACCGAAACCA 44 537669 0.974515629 22 42 296 0.958333333 1.361727836 0.375 0.090909091 0.166666667 44 1 1 46 4:537527-537752 6 zfh2 FBtr0332913 536964 538373 TGAAGA 6mer2-7 dme-miR-2b-2-5p 4 + 537575 537744 3'utr zfh2 FlyBase G42614.1 CAGCTAGACAAGATTCTGATGTTATTGCCGAAGGGAACTGTATTCTTAATTATGACACTAATGGTGGCGATTCCAAGAGTCATGTCCAGCATAATTTACCTAACGAAGTCGTTTCTGAAGATGCGCGAAAAATCGCTGGTAATCAGGAACTTATGCAGCAACTTTTTAAC 31 537669 0.980740511 12 27 193 0.886792453 1.371067862 0.320754717 0.580645161 0.754716981 31 5 1 47 4:537575-537744 6 5.5 5009 FBgn0004607 3.003333333 0.04 0.056666667 1.831298557 137.5 97.05882353 21 21 21 0.01 dme-bantam-3p 6mer3-8 TGATCT 4 537796 537801 + 4_537796_537801_+ 1 1 1 0 zfh2 FBtr0332913 536964 538373 4 + 537754 537819 3'utr zfh2 FlyBase G56438.1 ATCACCGGTAAGAGTTTCGGGAAGATACAAAAATCATCTACTTGATCTTATCTGTTGGTCAGATTA 31 537795 0.794894459 10 30 275 0.971428571 1.531478917 0.571428571 0.129032258 0.228571429 31 1 0 34 4:537754-537819 6 zfh2 FBtr0332913 536964 538373 TGATCT 6mer3-8 dme-bantam-3p 4 + 537768 537821 3'utr zfh2 FlyBase G42615.1 TTTCGGGAAGATACAAAAATCATCTACTTGATCTTATCTGTTGGTCAGATTAAA 19 537796 0.993000632 5 16 192 0.833333333 1.397940009 0.4 0.526315789 0.7 19 5 0 25 4:537768-537821 6 22 5010 FBgn0004607 3.003333333 0.04 0.056666667 7.325194229 550 388.2352941 1 0 0.5 0.01 dme-miR-190-5p 8mer-m1 ACATATCT 4 537933 537940 + 4_537933_537940_+ 0.577627638 0.540306235 0.558966936 0.026390215 zfh2 FBtr0332913 536964 538373 4 + 537852 538000 3'utr zfh2 FlyBase G56439.1 CACGTTTGCTTTGTCTGTTTATTTTAAAAAGTTTTATTTTGATGCCCACATCTGAATTGATATTTTCCAGAATGTTCAAAAACATATCTATAGCAGTAGGAATATATTTTTACGCCTCGCAAATTGACATTTTACGAAATAGTTTTTAC 137 537940 0.986725284 22 124 1068 0.894409938 1.681241237 0.155279503 0.153284672 0.279503106 137 15 2 144 4:537852-538000 8 zfh2 FBtr0332913 536964 538373 ACATATCT 8mer-m1 dme-miR-190-5p 4 + 537877 538003 3'utr zfh2 FlyBase G42616.1 AAAAAGTTTTATTTTGATGCCCACATCTGAATTGATATTTTCCAGAATGTTCAAAAACATATCTATAGCAGTAGGAATATATTTTTACGCCTCGCAAATTGACATTTTACGAAATAGTTTTTACTAA 103 537940 0.673356594 27 90 788 0.895833333 1.411619706 0.222222222 0.330097087 0.520833333 103 11 4 129 4:537877-538003 8 48 5011 FBgn0004607 3.003333333 0.04 0.056666667 15.98224195 1200 847.0588235 -7 -7 -7 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 4 538037 538042 + 4_538037_538042_+ 1 1 1 0 zfh2 FBtr0332913 536964 538373 4 + 538005 538147 3'utr zfh2 FlyBase G56440.1 AACTACAATAATATGTGTAAGCAAATATTGTATACCTGCGTGTGAAAAACTAAACAAGTAGAATAAGAGAACAAGTTACTCTTAGTGTGAGGGCTTTTAAAGTAAGTTCAGGAAAATGTCACTTTAAGTGCCGAGAAAACACC 58 538044 0.981252998 18 53 384 0.92 1.139879086 0.4 0.224137931 0.4 58 2 4 69 4:538005-538147 6 zfh2 FBtr0332913 536964 538373 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 4 + 538013 538055 3'utr zfh2 FlyBase G42616.2 TAATATGTGTAAGCAAATATTGTATACCTGCGTGTGAAAAACT 25 538042 0.669945446 5 20 160 0.846153846 1.51851394 0.461538462 0.4 0.615384615 25 6 0 33 4:538013-538055 6 23 5012 FBgn0004607 3.003333333 0.04 0.056666667 7.658157603 575 405.8823529 -7 -5 -6 0.01 dme-miR-1003-3p 6mer2-7 TGTGAG 4 538090 538095 + 4_538090_538095_+ 1 1 1 0 zfh2 FBtr0332913 536964 538373 4 + 538005 538147 3'utr zfh2 FlyBase G56440.1 AACTACAATAATATGTGTAAGCAAATATTGTATACCTGCGTGTGAAAAACTAAACAAGTAGAATAAGAGAACAAGTTACTCTTAGTGTGAGGGCTTTTAAAGTAAGTTCAGGAAAATGTCACTTTAAGTGCCGAGAAAACACC 58 538080 0.981252998 18 53 384 0.92 1.139879086 0.4 0.224137931 0.4 58 2 4 69 4:538005-538147 6 zfh2 FBtr0332913 536964 538373 TGTGAG 6mer2-7 dme-miR-1003-3p 4 + 538060 538180 3'utr zfh2 FlyBase G42616.3 AAGTAGAATAAGAGAACAAGTTACTCTTAGTGTGAGGGCTTTTAAAGTAAGTTCAGGAAAATGTCACTTTAAGTGCCGAGAAAACACCACATGCTAAAAGTACCCTACCTATTCCGAAGCG 31 538080 0.985342302 9 29 177 0.976744186 1.62324929 0.511627907 0.35483871 0.534883721 31 1 0 42 4:538060-538180 6 25.5 5013 FBgn0004607 3.003333333 0.04 0.056666667 8.490566038 637.5 450 10 10 10 0.01 dme-miR-276a-3p 7mer-A1 GTTCCTA 4 538876 538882 + 4_538876_538882_+ 0.785063126 0.823191868 0.804127497 0.026961133 zfh2 FBtr0307167|FBtr0089070 538553|538553 540874|539792 4 + 538832 539197 3'utr zfh2 FlyBase G56444.1 AACCTATTCCAACATTAGTAAGAATCTCTAAATTAAACGGAAGTGTTCCTAACTATTCGAAATATAAATTAGCAATAAACTTAAGGTATACACACTTGAGGCAATCCTTAACAATTCAAGATGGAGGGCGTTATCATGATAAGTTAAAATAACAAGTCGCTCCAAACAAAAATATGATATCATATAGATACATATATAATGAACTAGATTTAGTGAAATGTAAACTGAGTTCCTAGCATTTGATTGCTTTTGCCTTTGTTTTTATATTAGAATGTAGCCAATGAATACTAAGATCTGCTTCAGTATGCCGAATATAAAAGCTGAAATATATACATACGTGGTTCCTATTTTATTTAGAAACACTGT 507 538875 0.946271834 53 497 3521 0.982113821 2.303915684 0.045528455 0.169625247 0.315447154 507 9 2 604 4:538832-539197 7 zfh2 FBtr0307167|FBtr0089070 538553|538553 540874|539792 GTTCCTA 7mer-A1 dme-miR-276a-3p 4 + 538827 538902 3'utr zfh2 FlyBase G42622.1 GCGAAAACCTATTCCAACATTAGTAAGAATCTCTAAATTAAACGGAAGTGTTCCTAACTATTCGAAATATAAATTA 129 538875 0.976065097 6 128 822 0.994897959 2.290034611 0.005102041 0.356589147 0.576530612 129 1 0 195 4:538827-538902 7 206 5014 FBgn0004607 3.003333333 0.04 0.056666667 68.59045505 5150 3635.294118 1 1 1 0.01 dme-miR-970-3p 7mer-m8 TCTTATG 4 539232 539238 + 4_539232_539238_+ 0.658999343 0.658999343 0.658999343 0 zfh2 FBtr0307167|FBtr0089070 538553|538553 540874|539792 4 + 539221 539276 3'utr zfh2 FlyBase G56445.1 ATTTACGTCATTCTTATGGTGAGAGAATCGTGCCAATAATTTGTTCTGCAGAAAAT 20 539231 0.741441974 6 19 149 1 1.361727836 0.391304348 0.15 0.260869565 20 0 0 23 4:539221-539276 7 zfh2 FBtr0307167|FBtr0089070 538553|538553 540874|539792 TCTTATG 7mer-m8 dme-miR-970-3p 4 + 539221 539272 3'utr zfh2 FlyBase G42625.1 ATTTACGTCATTCTTATGGTGAGAGAATCGTGCCAATAATTTGTTCTGCAGA 6 539231 0.986592928 5 6 48 1 0.903089987 0.5 0.166666667 0.375 6 0 0 8 4:539221-539272 7 11 5015 FBgn0004607 3.003333333 0.04 0.056666667 3.662597114 275 194.1176471 1 1 1 0.01 dme-miR-13b-2-5p 6mer3-8 TTTGAC 4 539704 539709 + 4_539704_539709_+ 0.999483848 0.992700213 0.99609203 0.00479673 zfh2 FBtr0307167|FBtr0089070 538553|538553 540874|539792 4 + 539687 539733 3'utr zfh2 FlyBase G56447.1 TTTAAAAGAAAATAATATTTGACTGAAAATTAAAATATAAAAAAATT 89 539704 0.686349165 6 82 640 0.927272727 1.707570176 0 0.213483146 0.363636364 89 7 1 102 4:539687-539733 6 zfh2 FBtr0307167|FBtr0089070 538553|538553 540874|539792 TTTGAC 6mer3-8 dme-miR-13b-2-5p 4 + 539689 539736 3'utr zfh2 FlyBase G42627.1 TAAAAGAAAATAATATTTGACTGAAAATTAAAATATAAAAAAATTAAA 44 539704 0.660890058 7 42 323 0.936507937 1.293730757 0 0.318181818 0.523809524 44 2 2 59 4:539689-539736 6 66.5 5016 FBgn0004607 3.003333333 0.04 0.056666667 22.14206437 1662.5 1173.529412 0 0 0 0.01 dme-miR-276a-3p 8mer-A1 AGTTCCTA 4 539872 539879 + 4_539872_539879_+ 0.637906983 0.637898608 0.637902796 5.94E-06 zfh2 FBtr0307167 538553 540874 4 + 539857 539918 3'utr zfh2 FlyBase G56448.1 AAGAATCTACTAAGAAGTTCCTATAGAATTTAATAAAAAGATATACAAATATATTTACGTGT 41 539863 0.8646097 9 24 357 0.565217391 0.812913357 0.065217391 0.12195122 0.217391304 41 17 3 26 4:539857-539918 8 zfh2 FBtr0307167 538553 540874 AGTTCCTA 8mer-A1 dme-miR-276a-3p 4 + 539858 539897 3'utr zfh2 FlyBase G42629.1 AGAATCTACTAAGAAGTTCCTATAGAATTTAATAAAAAGA 20 539864 0.804114552 8 17 157 0.88 0.865301426 0 0.2 0.36 20 1 2 22 4:539858-539897 8 29 5017 FBgn0004607 3.003333333 0.04 0.056666667 9.655937847 725 511.7647059 9 8 8.5 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 4 540045 540052 + 4_540045_540052_+ 0.500120318 0.500120318 0.500120318 0 zfh2 FBtr0307167 538553 540874 4 + 539988 540099 3'utr zfh2 FlyBase G56449.1 TGTAGAAATAATGTCATATATAAATATGTGAATGTTTGAAATCCCATTTAAATACATGTACTTAAGCCTTCACAATTGCCAACAAACACAGATATGGACAGAATACCATACT 64 540044 0.921574665 9 62 441 0.974025974 1.875061263 0.090909091 0.171875 0.311688312 64 2 0 75 4:539988-540099 8 zfh2 FBtr0307167 538553 540874 GTACTTAA 8mer-A1 dme-miR-252-5p 4 + 540027 540092 3'utr zfh2 FlyBase G42632.1 AATCCCATTTAAATACATGTACTTAAGCCTTCACAATTGCCAACAAACACAGATATGGACAGAATA 40 540044 0.890217003 5 38 232 0.920634921 1.161368002 0.015873016 0.4 0.619047619 40 2 3 58 4:540027-540092 8 42 5018 FBgn0004607 3.003333333 0.04 0.056666667 13.98446171 1050 741.1764706 1 1 1 0.01 dme-miR-184-3p 7mer-m8 TCCGTCC 4 542001 542007 - 4_542001_542007_- 0.661615243 0.661615243 0.661615243 0 Thd1 FBtr0345197|FBtr0333706 538330|540558 545662|545662 4 - 541984 542027 3'utr Thd1 FlyBase G56931.1 ATCGAGTCGAACTGGCCATTTCCGTCCGTCTGAGGGCTCATCTT 36 542008 0.753355223 4 35 258 0.976190476 1.612783857 0.238095238 0.166666667 0.285714286 36 1 0 41 4:541984-542027 7 Thd1 FBtr0333706|FBtr0345197 540558|538330 545662|545662 TCCGTCC 7mer-m8 dme-miR-184-3p 4 - 541984 542025 3'utr Thd1 FlyBase G42999.1 CGAGTCGAACTGGCCATTTCCGTCCGTCTGAGGGCTCATCTT 22 542008 0.762194712 3 22 158 1 1.477121255 0.233333333 0.318181818 0.5 22 0 0 30 4:541984-542025 7 29 5019 FBgn0026869 3486.926667 66.67 102.3333333 0.008316779 0.434978251 0.283387622 1 1 1 0.01 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 4 544258 544264 - 4_544258_544264_- 0.823349562 0.823349562 0.823349562 0 Thd1 FBtr0345197|FBtr0333706 538330|540558 545662|545662 4 - 544236 544281 3'utr Thd1 FlyBase G56935.1 TTCAAATGCGTTTAGGTTACCTGAGCGTGTGAGTGTAATTTTTCTT 8 544265 0.974925753 2 8 71 1 1 0.4 0.25 0.4 8 0 0 10 4:544236-544281 7 Thd1 FBtr0333706|FBtr0345197 540558|538330 545662|545662 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 4 - 544227 544287 3'utr Thd1 FlyBase G43002.1 ACAAATTTCAAATGCGTTTAGGTTACCTGAGCGTGTGAGTGTAATTTTTCTTAATATCAAT 9 544265 0.989986283 6 8 77 0.9375 1.176091259 0.1875 0.444444444 0.6875 9 1 0 15 4:544227-544287 7 8 5020 FBgn0026869 3486.926667 66.67 102.3333333 0.002294284 0.119994 0.078175896 1 1 1 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA 4 545346 545353 - 4_545346_545353_- 0.500120318 0.500120318 0.500120318 0 Thd1 FBtr0345197|FBtr0089106|FBtr0333706 538330|545266|540558 545662|545662|545662 4 - 545333 545368 3'utr Thd1 FlyBase G56939.2 CCGAAACAATTGTTTGTACTTAAATCATTTAAGCAT 53 545354 0.697814862 4 48 487 0.938461538 1.785329835 0.076923077 0.188679245 0.338461538 53 4 0 61 4:545333-545368 8 Thd1 FBtr0333706|FBtr0345197 540558|538330 545662|545662 GTACTTAA 8mer-A1 dme-miR-252-5p 4 - 545266 545372 3'utr Thd1 FlyBase G43004.1 GATCCCGAAACAATTGTTTGTACTTAAATCATTTAAGCATACTTTATTTTACTCACACACAAATATTGCGAAACTTACTAGTATATAATAAAGTTTTAAAATAATAA 41 545354 0.978728484 10 38 385 0.927272727 1.40654018 0.163636364 0.268292683 0.454545455 41 3 1 51 4:545266-545372 8 41.5 5021 FBgn0026869 3486.926667 66.67 102.3333333 0.011901598 0.622468877 0.405537459 1 1 1 0.01 dme-miR-2535b-3p 6mer3-8 CCGTGA 4 565765 565770 + 4_565765_565770_+ 1 1 1 0 Pur-alpha FBtr0310640|FBtr0089995|FBtr0089994|FBtr0310639|FBtr0089993|FBtr0310638|FBtr0089996 565755|565755|565755|565755|565755|565755|565755 567257|565931|565931|565931|567257|567257|565931 4 + 565741 565795 stop_codon Pur-alpha FlyBase G56460.2 AAATAGTCTTAAATAAACAACATACCGTGATTTACTAAGTTATATAAGAAGGCGC 93 565772 0.650600224 7 92 544 0.991304348 2.056904851 0 0.204301075 0.356521739 93 1 0 114 4:565741-565795 6 Pur-alpha FBtr0310639|FBtr0089994|FBtr0089995|FBtr0310640|FBtr0089996|FBtr0310638|FBtr0089993 565755|565755|565755|565755|565755|565755|565755 565931|565931|565931|567257|565931|567257|567257 CCGTGA 6mer3-8 dme-miR-2535b-3p 4 + 565683 565789 stop_codon Pur-alpha FlyBase G42638.1 AGAAAATGAAAAAATCGTCCGACTCAATTACTGCCGAAATTAACTTACCTACATCTTCAAATAGTCTTAAATAAACAACATACCGTGATTTACTAAGTTATATAAGA 93 565772 0.916697773 11 90 496 0.972972973 1.857332496 0.027027027 0.451612903 0.655405405 93 3 1 144 4:565683-565789 6 82 5022 FBgn0022361 255.0033333 15.47333333 23.55666667 0.321564424 5.299439897 3.480967879 -7 -7 -7 0.01 dme-miR-79-3p 6mer3-8 TAGCTT 4 566046 566051 + 4_566046_566051_+ 1 1 1 0 Pur-alpha FBtr0310640|FBtr0089993|FBtr0310638 565755|565755|565755 567257|567257|567257 4 + 565990 566065 3'utr Pur-alpha FlyBase G56462.1 AAATTAACTCTTAAAATCCATTTTGAACTCTAAATGTCCTTTTTTGGCTGGCTGTTTAGCTTCTACTTAGTGCAAG 98 566038 0.8410059 12 96 1031 0.982905983 2.06069784 0.094017094 0.183673469 0.316239316 98 2 0 115 4:565990-566065 6 Pur-alpha FBtr0310640|FBtr0310638|FBtr0089993 565755|565755|565755 567257|567257|567257 TAGCTT 6mer3-8 dme-miR-79-3p 4 + 565995 566070 3'utr Pur-alpha FlyBase G42640.1 AACTCTTAAAATCCATTTTGAACTCTAAATGTCCTTTTTTGGCTGGCTGTTTAGCTTCTACTTAGTGCAAGAAAAT 58 566038 0.825748127 14 55 566 0.964705882 1.612783857 0.164705882 0.310344828 0.529411765 58 2 1 82 4:565995-566070 6 59.5 5023 FBgn0022361 255.0033333 15.47333333 23.55666667 0.233330283 3.845325291 2.525824254 8 8 8 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 4 566727 566732 + 4_566727_566732_+ 0.730949445 0.730949445 0.730949445 0 Pur-alpha FBtr0310640|FBtr0310640|FBtr0310640|FBtr0089993|FBtr0089993|FBtr0089993|FBtr0310638|FBtr0310638|FBtr0310638 565755|565755|565755|565755|565755|565755|565755|565755|565755 567257|567257|567257|567257|567257|567257|567257|567257|567257 4 + 566697 566788 3'utr Pur-alpha FlyBase G56466.1 CCTAAACTCGTTTTTAAAACAAAAGTTTCATGTGATCACGTAGAATAAAAACTTACTAAGTACGATGAACATGCATAGCAAAATAACAACAT 166 566724 0.92125605 13 145 1139 0.875 1.604765885 0.130434783 0.096385542 0.184782609 166 20 3 161 4:566697-566788 6 Pur-alpha FBtr0310640|FBtr0310640|FBtr0310640|FBtr0310638|FBtr0310638|FBtr0310638|FBtr0089993|FBtr0089993|FBtr0089993 565755|565755|565755|565755|565755|565755|565755|565755|565755 567257|567257|567257|567257|567257|567257|567257|567257|567257 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 4 + 566700 566766 3'utr Pur-alpha FlyBase G42642.1 AAACTCGTTTTTAAAACAAAAGTTTCATGTGATCACGTAGAATAAAAACTTACTAAGTACGATGAAC 99 566724 0.98569285 7 79 673 0.817567568 1.605664116 0.101351351 0.333333333 0.554054054 99 25 2 121 4:566700-566766 6 124.5 5024 FBgn0022361 255.0033333 15.47333333 23.55666667 0.488228912 8.046100819 5.28512806 3 3 3 0.01 dme-miR-1006-3p 6mer2-7 GAATTT 4 566909 566914 + 4_566909_566914_+ 1 1 1 0 Pur-alpha FBtr0310640|FBtr0089993|FBtr0310638 565755|565755|565755 567257|567257|567257 4 + 566864 566931 3'utr Pur-alpha FlyBase G56467.1 AGTAATAAATTAGCTGTACTAATTATTAAGTATTGAAATTTATCAGAATTTGGGTTCAATAAAGAGAG 6 566913 0.978086135 2 6 48 1 0.77815125 0.5 0 0 6 0 0 6 4:566864-566931 6 Pur-alpha FBtr0310640|FBtr0310638|FBtr0089993 565755|565755|565755 567257|567257|567257 GAATTT 6mer2-7 dme-miR-1006-3p 4 + 566896 566932 3'utr Pur-alpha FlyBase G42643.1 TTGAAATTTATCAGAATTTGGGTTCAATAAAGAGAGA 5 566917 0.970693568 2 5 34 1 0.903089987 0.125 0.4 0.625 5 0 0 8 4:566896-566932 6 5 5025 FBgn0022361 255.0033333 15.47333333 23.55666667 0.019607587 0.323136579 0.212254139 -4 -8 -6 0.01 dme-miR-184-5p 6mer3-8 TGATAA 4 577434 577439 + 4_577434_577439_+ 1 0.729160058 0.864580029 0.19151273 Ephrin FBtr0089076|FBtr0089077|FBtr0089075 577321|577321|577321 578143|580122|578143 4 + 577400 577576 3'utr Ephrin FlyBase G56486.1 TGTCACTCTTCTCCGGCTATTGCTATATAAACAGTGATAAAAGTATTAGGTGTGAGAGGTTGGAATCAAATGATATTAATTTGGATATGTAATTGCAATTGAACGAGTTACTGTGACTCGCAATTTAAAATGATAGATCAGAAAGAAAGGAGAAAGGTGAAATAGAATTAATAAGTA 33 577425 0.777637638 18 29 190 0.87804878 1.556302501 0.170731707 0.212121212 0.365853659 33 5 0 36 4:577400-577576 6 Ephrin FBtr0089077|FBtr0089075|FBtr0089076 577321|577321|577321 580122|578143|578143 TGATAA 6mer3-8 dme-miR-184-5p 4 + 577393 577520 3'utr Ephrin FlyBase G42654.1 AAATATTTGTCACTCTTCTCCGGCTATTGCTATATAAACAGTGATAAAAGTATTAGGTGTGAGAGGTTGGAATCAAATGATATTAATTTGGATATGTAATTGCAATTGAACGAGTTACTGTGACTCGC 25 577427 0.981125568 13 23 165 0.944444444 1.531478917 0.166666667 0.36 0.555555556 25 2 0 34 4:577393-577520 6 9 5026 FBgn0040324 1976.393333 63.49666667 97.38666667 0.004553749 0.141739724 0.092415115 9 7 8 0.01 dme-miR-7-5p 6mer3-8 GTCTTC 4 577723 577728 + 4_577723_577728_+ 0.999999853 1 0.999999926 7.07E-08 Ephrin FBtr0089076|FBtr0089077|FBtr0089075 577321|577321|577321 578143|580122|578143 4 + 577721 577787 3'utr Ephrin FlyBase G56489.1 GTGTCTTCTGTCCTCTCTTTTATTGTGTCCTTCTGGTTTTCCGAAAATGCTTTTATAGCGGTATGCG 16 577744 0.992514914 8 14 184 0.904761905 0.977723605 0.285714286 0.3125 0.476190476 16 1 1 19 4:577721-577787 6 Ephrin FBtr0089077|FBtr0089075|FBtr0089076 577321|577321|577321 580122|578143|578143 GTCTTC 6mer3-8 dme-miR-7-5p 4 + 577714 577752 3'utr Ephrin FlyBase G42656.1 AGCCACTGTGTCTTCTGTCCTCTCTTTTATTGTGTCCTT 5 577728 0.992402466 4 5 55 1 0.84509804 0 0.4 0.571428571 5 0 0 7 4:577714-577752 6 2.5 5027 FBgn0040324 1976.393333 63.49666667 97.38666667 0.00126493 0.039372146 0.025670865 -21 -5 -13 0.01 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 4 577873 577879 + 4_577873_577879_+ 0.823349562 0.823349562 0.823349562 0 Ephrin FBtr0089076|FBtr0089077|FBtr0089075 577321|577321|577321 578143|580122|578143 4 + 577861 577903 3'utr Ephrin FlyBase G56490.1 CAGCTATATTTTTACCTGACTTCGCGTCTATTAGCTAAAATGA 8 577871 0.868935113 4 6 55 0.777777778 0.84509804 0.222222222 0.125 0.222222222 8 2 0 7 4:577861-577903 7 Ephrin FBtr0089077|FBtr0089075|FBtr0089076 577321|577321|577321 580122|578143|578143 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 4 + 577860 577890 3'utr Ephrin FlyBase G42658.1 ACAGCTATATTTTTACCTGACTTCGCGTCTA 7 577871 0.675684281 2 7 63 1 1.146128036 0 0.714285714 0.857142857 7 0 0 14 4:577860-577890 7 6.5 5028 FBgn0040324 1976.393333 63.49666667 97.38666667 0.003288819 0.102367578 0.06674425 2 2 2 0.01 dme-miR-283-5p 7mer-m1 GATATTT 4 578069 578075 + 4_578069_578075_+ 0.765586663 0.765586663 0.765586663 0 Ephrin FBtr0089076|FBtr0089077|FBtr0089075 577321|577321|577321 578143|580122|578143 4 + 578013 578105 3'utr Ephrin FlyBase G56492.1 ACAATTTCCCATTACAAATCCCATTACTGTTTCAAAACTAGTTATCCTGTACGAAGGATATTTCGACTGAAATTAATTAGCATCGCTGACTAA 229 578074 0.977086078 16 223 1463 0.979452055 1.854306042 0.020547945 0.222707424 0.390410959 229 3 3 286 4:578013-578105 7 Ephrin FBtr0089077|FBtr0089075|FBtr0089076 577321|577321|577321 580122|578143|578143 GATATTT 7mer-m1 dme-miR-283-5p 4 + 578027 578110 3'utr Ephrin FlyBase G42659.1 CAAATCCCATTACTGTTTCAAAACTAGTTATCCTGTACGAAGGATATTTCGACTGAAATTAATTAGCATCGCTGACTAAAAAAC 212 578074 0.909058683 14 198 1329 0.939393939 1.746634199 0.02020202 0.301886792 0.501683502 212 14 4 279 4:578027-578110 7 211.5 5029 FBgn0040324 1976.393333 63.49666667 97.38666667 0.107013111 3.330883511 2.171755203 -5 -5 -5 0.01 dme-miR-8-3p 6mer3-8 CAGTAT 4 578372 578377 + 4_578372_578377_+ 1 1 1 0 Ephrin FBtr0089077 577321 580122 4 + 578347 578395 3'utr Ephrin FlyBase G56494.1 AATTTTATTTTGTAAATGAACCAAGCAGTATAGAGAAGTGATTCTTAAC 21 578390 0.738015224 8 18 127 0.88 1.342422681 0.24 0.19047619 0.32 21 3 0 22 4:578347-578395 6 Ephrin FBtr0089077 577321 580122 CAGTAT 6mer3-8 dme-miR-8-3p 4 + 578347 578395 3'utr Ephrin FlyBase G42661.1 AATTTTATTTTGTAAATGAACCAAGCAGTATAGAGAAGTGATTCTTAAC 22 578390 0.95241322 6 18 111 0.857142857 1.477121255 0.114285714 0.409090909 0.628571429 22 5 0 30 4:578347-578395 6 21.5 5030 FBgn0040324 1976.393333 63.49666667 97.38666667 0.010878401 0.338600451 0.220769441 -18 -18 -18 0.01 dme-miR-932-5p 6mer3-8 GGAATT 4 620290 620295 + 4_620290_620295_+ 1 1 1 0 Eph FBtr0301285 620104 620734 4 + 620268 620360 5'utr Eph FlyBase G56526.1 AGCTCAACAACTTTCGGACATGGGAATTACTTTAGTTGGACATCAAAAAAAGATCTTACATCAAGCCCGGCAACTCGACACTATAATATAAAC 25 620296 0.886773682 11 19 138 0.709677419 1.342422681 0.322580645 0.2 0.35483871 25 9 0 22 4:620268-620360 6 Eph FBtr0301285 620104 620734 GGAATT 6mer3-8 dme-miR-932-5p 4 + 620260 620360 5'utr Eph FlyBase G42685.1 AGGTTAACAGCTCAACAACTTTCGGACATGGGAATTACTTTAGTTGGACATCAAAAAAAGATCTTACATCAAGCCCGGCAACTCGACACTATAATATAAAC 16 620303 0.958889895 11 14 70 0.913043478 1.021189299 0.260869565 0.375 0.565217391 16 1 1 21 4:620260-620360 6 5.5 5031 FBgn0025936 2044.833333 61.14666667 93.30666667 0.002689706 0.089947667 0.058945413 -6 -13 -9.5 0.01 dme-miR-307a-3p 7mer-A1 GTTGTGA 4 620793 620799 + 4_620793_620799_+ 0.823031185 0.821707796 0.82236949 0.000935785 Eph FBtr0089086|FBtr0089082|FBtr0089084|FBtr0089083 620357|620357|620357|620357 622470|620926|620926|620926 4 + 620680 620838 3'utr Eph FlyBase G56528.1 TATACCTTATATATCAATGTGTACCAATTATTTATTATACGAACAATTTTCAAGCTTATTATTATAAGAGTTTAGAGGCGCTATGATTGCCTTGCTATATTTTACCTTTTTTTGTTGTGATAGAAGTGGAATTAAAGAACTATTCATCTTTATTAGATT 190 620793 0.822310191 33 182 2146 0.960352423 1.639486489 0.383259912 0.163157895 0.299559471 190 5 4 218 4:620680-620838 7 Eph FBtr0089084|FBtr0089083|FBtr0089082|FBtr0089086 620357|620357|620357|620357 620926|620926|620926|622470 GTTGTGA 7mer-A1 dme-miR-307a-3p 4 + 620717 620882 3'utr Eph FlyBase G42688.1 TACGAACAATTTTCAAGCTTATTATTATAAGAGTTTAGAGGCGCTATGATTGCCTTGCTATATTTTACCTTTTTTTGTTGTGATAGAAGTGGAATTAAAGAACTATTCATCTTTATTAGATTATATTTCATGGTTTACTTTGCATAAAATAGTGAAAAACTCAATA 101 620793 0.992723967 25 93 1080 0.925170068 1.531478917 0.31292517 0.326732673 0.537414966 101 8 3 136 4:620717-620882 7 103 5032 FBgn0025936 2044.833333 61.14666667 93.30666667 0.050370853 1.684474488 1.103886825 0 0 0 0.01 dme-miR-1006-3p 7mer-A1 GAATTTA 4 649288 649294 - 4_649288_649294_- 0.823349562 0.823349562 0.823349562 0 gw FBtr0310542 649039 650256 4 - 649283 649330 3'utr gw FlyBase G57000.1 TAGTAAAACCAAGTGATTTAAAAAGAACGTGTATCTGAATTTATTACA 7 649301 0.96727051 5 6 33 1 0.903089987 0 0.142857143 0.25 7 0 0 8 4:649283-649330 7 gw FBtr0310542 649039 650256 GAATTTA 7mer-A1 dme-miR-1006-3p 4 - 649288 649316 3'utr gw FlyBase G43059.1 GATTTAAAAAGAACGTGTATCTGAATTTA 5 649301 0.973742539 2 5 28 1 0.698970004 0.2 0 0 5 0 0 5 4:649288-649316 6 3.5 5033 FBgn0051992 3462.52 78.52666667 120.4066667 0.001010824 0.044570846 0.029068158 7 7 7 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 4 649519 649524 - 4_649519_649524_- 0.999999984 1 0.999999992 0 gw FBtr0310542 649039 650256 4 - 649483 649548 3'utr gw FlyBase G57001.1 TGTTTCCAGTAAGGAAAAAATACCTGTGTTATATTCATTAGAGGAAGTTGTAATCGTATTACGGTT 29 649517 0.804503373 10 24 239 0.78125 1.397940009 0.09375 0.103448276 0.1875 29 7 0 25 4:649483-649548 6 gw FBtr0310542 649039 650256 TGTGTT 6mer3-8 dme-miR-317-3p 4 - 649443 649549 3'utr gw FlyBase G43060.1 GTGTTTCCAGTAAGGAAAAAATACCTGTGTTATATTCATTAGAGGAAGTTGTAATCGTATTACGGTTTTGCTTTCATCAAAGCATTCCCACCGAAAAAGTTCGGCTA 26 649520 0.982673745 10 23 181 0.852941176 1.462397998 0.323529412 0.269230769 0.441176471 26 5 0 29 4:649443-649549 6 20.5 5034 FBgn0051992 3462.52 78.52666667 120.4066667 0.005920543 0.261057815 0.170256353 -7 -4 -5.5 0.01 dme-miR-1006-3p 6mer2-7 GAATTT 4 650083 650088 - 4_650083_650088_- 1 1 1 0 gw FBtr0310542 649039 650256 4 - 650067 650595 stop_codon gw FlyBase G57004.1 ACGATTACCACTGTAGCAAATTCGAATCTTGTTGGTTCTAGTGGCTCTGTCTCAAATTCCTCTGGCGTTACTGCTAACTCTAGTACTGTTTCTGTAGTTAGTTGTACAGCGAGTGGGAATTCCATAAATGGGGCAGGTACTGCAAACAGTTCTGGTTCAAAGAGTAGTGCAAACAATTTAGCTAGCGGCCAGTCTAGCGCTTCTAACTTAACTAATAGCACCAATTCAACATGGCGACAAACTAGCCAAAACCAAGCTCTTCAAAGTCAAAGCAGGCCATCAGGCAGAGAAGCTGACTTTGATTATATATCTCTCGTTTATTCCATTGTTGATGATTAAAAGATCAATTACCAGTTCCATTGGTCATTGGCCATTGACTATCGCATTCTGTGACTCAAGACACACACACCCAAAAGCTTCAAATTATATGATACTAAGTATGTATGAAAAGCAAGACCATGTTGTGAGGAATACAAAAGTGGATCGACTGATAGACGAATGGACTTAGAATTTTGTATGCCTGTAGATT 1850 650096 0.988326452 77 1827 9225 0.987676056 2.447932866 0.212588028 0.183243243 0.334947183 1850 21 7 2244 4:650067-650595 6 gw FBtr0310543|FBtr0089097|FBtr0089100|FBtr0089096|FBtr0089101|FBtr0310542 649969|649969|649969|649969|649969|649039 650256|650256|650256|650256|650256|650256 GAATTT 6mer2-7 dme-miR-1006-3p 4 - 650068 650156 3'utr gw FlyBase G43064.2 ATGTATGAAAAGCAAGACCATGTTGTGAGGAATACAAAAGTGGATCGACTGATAGACGAATGGACTTAGAATTTTGTATGCCTGTAGAT 1376 650096 0.927300604 15 1347 6604 0.984050266 2.405687787 0.230546158 0.365552326 0.578057032 1376 26 7 2036 4:650068-650156 6 1137 5035 FBgn0051992 3462.52 78.52666667 120.4066667 0.328373555 14.47915782 9.442998727 8 8 8 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 4 686100 686106 + 4_686100_686106_+ 0.661615511 0.661615511 0.661615511 0 CG11360 FBtr0089091|FBtr0310540|FBtr0310539|FBtr0310541 686039|686039|686039|686039 689595|687565|690650|687565 4 + 686071 686152 3'utr CG11360 FlyBase G56563.1 TTGTTAGTTTTTAGTTAGTCGGTTACACATCTAGTCGTGGCTTCCGTGAAGTCTATTAACATTAGTTGAACGTTCAGGGATT 96 686100 0.980332826 14 94 780 0.983606557 1.77815125 0.319672131 0.197916667 0.368852459 96 1 1 120 4:686071-686152 7 CG11360 FBtr0310541|FBtr0310539|FBtr0310540|FBtr0089091 686039|686039|686039|686039 687565|690650|687565|689595 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 4 + 686071 686152 3'utr CG11360 FlyBase G42715.1 TTGTTAGTTTTTAGTTAGTCGGTTACACATCTAGTCGTGGCTTCCGTGAAGTCTATTAACATTAGTTGAACGTTCAGGGATT 63 686100 0.760560493 11 60 483 0.968421053 1.662757832 0.442105263 0.380952381 0.589473684 63 2 1 92 4:686071-686152 7 66 5036 FBgn0039920 1210.836667 29.66666667 45.19333333 0.054507765 2.224719101 1.460392388 0 0 0 0.01 dme-miR-317-3p 6mer3-8 TGTGTT 4 687363 687368 + 4_687363_687368_+ 1 1 1 0 CG11360 FBtr0089091|FBtr0310540|FBtr0310539|FBtr0310541 686039|686039|686039|686039 689595|687565|690650|687565 4 + 687347 687383 3'utr CG11360 FlyBase G56564.1 GATATAAAAATTTTTCTGTGTTTTAGGAAGTCATCTA 16 687360 0.697213565 7 14 171 0.9 1.255272505 0.25 0.1875 0.35 16 2 0 18 4:687347-687383 6 CG11360 FBtr0310541|FBtr0310539|FBtr0310540|FBtr0089091 686039|686039|686039|686039 687565|690650|687565|689595 TGTGTT 6mer3-8 dme-miR-317-3p 4 + 687339 687385 3'utr CG11360 FlyBase G42717.1 GAATAGCGGATATAAAAATTTTTCTGTGTTTTAGGAAGTCATCTATA 10 687361 0.988469687 4 8 110 0.727272727 0.602059991 0.454545455 0.1 0.181818182 10 2 1 8 4:687339-687385 6 13 5037 FBgn0039920 1210.836667 29.66666667 45.19333333 0.010736378 0.438202247 0.287653046 3 2 2.5 0.01 dme-miR-2b-2-5p 7mer-A1 TGAAGAA 4 687457 687463 + 4_687457_687463_+ 0.823349562 0.823349556 0.823349559 0 CG11360 FBtr0089091|FBtr0310540|FBtr0310539|FBtr0310541 686039|686039|686039|686039 689595|687565|690650|687565 4 + 687421 687474 3'utr CG11360 FlyBase G56565.1 AAGTAGAACAAACCCAAATTCTATTGAAGACCTTAGTGAAGAATTTTAATAGTG 11 687454 0.976640334 6 11 74 1 1.146128036 0.071428571 0.272727273 0.428571429 11 0 0 14 4:687421-687474 7 CG11360 FBtr0310541|FBtr0310539|FBtr0310540|FBtr0089091 686039|686039|686039|686039 687565|690650|687565|689595 TGAAGAA 7mer-A1 dme-miR-2b-2-5p 4 + 687424 687470 3'utr CG11360 FlyBase G42718.1 TAGAACAAACCCAAATTCTATTGAAGACCTTAGTGAAGAATTTTAAT 7 687465 0.969190367 6 7 42 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 4:687424-687470 7 7.5 5038 FBgn0039920 1210.836667 29.66666667 45.19333333 0.006194064 0.252808989 0.16595368 3 -8 -2.5 0.01 dme-bantam-3p 6mer3-8 TGATCT 4 688446 688451 + 4_688446_688451_+ 1 1 1 0 CG11360 FBtr0089091|FBtr0310539 686039|686039 689595|690650 4 + 688427 688467 3'utr CG11360 FlyBase G56567.1 GTTGACGTTGTGAAATTCCTGATCTGTTATAAAACTTTAAA 18 688453 0.684799664 7 16 154 0.954545455 1.322219295 0.045454545 0.111111111 0.272727273 18 1 0 21 4:688427-688467 6 CG11360 FBtr0310539|FBtr0089091 686039|686039 690650|689595 TGATCT 6mer3-8 dme-bantam-3p 4 + 688427 688458 3'utr CG11360 FlyBase G42719.1 GTTGACGTTGTGAAATTCCTGATCTGTTATAA 6 688454 0.887859386 4 6 52 1 1 0 0.333333333 0.6 6 0 0 10 4:688427-688458 6 11.5 5039 FBgn0039920 1210.836667 29.66666667 45.19333333 0.009497565 0.387640449 0.25446231 -7 -8 -7.5 0.01 dme-miR-184-5p 6mer3-8 TGATAA 4 688895 688900 + 4_688895_688900_+ 1 0.979331683 0.989665842 0.014614695 CG11360 FBtr0089091|FBtr0310539 686039|686039 689595|690650 4 + 688857 688947 3'utr CG11360 FlyBase G56569.1 ACTTTATGATACTAATTCTCTGAAAAATTTAAAACGACTGATAAATTAGCATAAATATTAAGATCGGACACAATATATATATACATAAATA 41 688902 0.791741347 7 35 301 0.840909091 1.568201724 0.045454545 0.073170732 0.136363636 41 7 0 37 4:688857-688947 6 CG11360 FBtr0310539|FBtr0089091 686039|686039 690650|689595 TGATAA 6mer3-8 dme-miR-184-5p 4 + 688804 688914 3'utr CG11360 FlyBase G42720.1 ATTTATTTTTAAACAACAAACATGATGAAAAATATATTGTATCTATAAAGTAAACTTTATGATACTAATTCTCTGAAAAATTTAAAACGACTGATAAATTAGCATAAATAT 29 688884 0.987200865 11 24 211 0.880952381 1.568201724 0.071428571 0.344827586 0.547619048 29 5 0 37 4:688804-688914 6 27 5040 FBgn0039920 1210.836667 29.66666667 45.19333333 0.022298631 0.91011236 0.59743325 -7 11 2 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA 4 689013 689018 + 4_689013_689018_+ 1 1 1 0 CG11360 FBtr0089091|FBtr0310539 686039|686039 689595|690650 4 + 688987 689074 3'utr CG11360 FlyBase G56570.1 ACTTAAATCTACGATATATGACCCACATGTGACAACTACCTTTAAAAACTTACTATTAATGTGAATAAAAAGACTTATATATTATAGT 18 689015 0.987360761 6 14 128 0.772727273 1.230448921 0.045454545 0.166666667 0.318181818 18 5 0 17 4:688987-689074 6 CG11360 FBtr0310539|FBtr0089091 686039|686039 690650|689595 ATGTGA 6mer3-8 dme-miR-1003-3p 4 + 688987 689028 3'utr CG11360 FlyBase G42721.1 ACTTAAATCTACGATATATGACCCACATGTGACAACTACCTT 6 689014 0.950137441 4 6 28 1 0.954242509 0.111111111 0.333333333 0.555555556 6 0 0 9 4:688987-689028 6 6 5041 FBgn0039920 1210.836667 29.66666667 45.19333333 0.004955251 0.202247191 0.132762944 -2 -1 -1.5 0.01 dme-miR-14-3p 6mer3-8 AAGACT 4 689056 689061 + 4_689056_689061_+ 1 0.999021896 0.999510948 0.000691621 CG11360 FBtr0089091|FBtr0310539 686039|686039 689595|690650 4 + 688987 689074 3'utr CG11360 FlyBase G56570.1 ACTTAAATCTACGATATATGACCCACATGTGACAACTACCTTTAAAAACTTACTATTAATGTGAATAAAAAGACTTATATATTATAGT 18 689064 0.987360761 6 14 128 0.772727273 1.230448921 0.045454545 0.166666667 0.318181818 18 5 0 17 4:688987-689074 6 CG11360 FBtr0310539|FBtr0089091 686039|686039 690650|689595 AAGACT 6mer3-8 dme-miR-14-3p 4 + 689044 689076 3'utr CG11360 FlyBase G42722.1 AATGTGAATAAAAAGACTTATATATTATAGTCA 13 689064 0.648082029 3 10 86 0.833333333 1.176091259 0 0.384615385 0.555555556 13 3 0 15 4:689044-689076 6 11 5042 FBgn0039920 1210.836667 29.66666667 45.19333333 0.009084627 0.370786517 0.243398731 -8 -8 -8 0.01 dme-miR-282-5p 7mer-m8 AGAGGCT 4 689247 689253 + 4_689247_689253_+ 0.631524569 0.631524569 0.631524569 0 CG11360 FBtr0089091|FBtr0310539 686039|686039 689595|690650 4 + 689178 689278 3'utr CG11360 FlyBase G56572.1 TGTTATACCTGTGTTTTAAAATTGTGTACTGTGCTTCAAGGTTAAATGAATCAATCGAAAATTTGTAATAGAGGCTGGCTTATATATATTTAAATGTATAA 64 689246 0.987691718 10 62 557 0.972972973 1.857332496 0.081081081 0.15625 0.27027027 64 2 0 72 4:689178-689278 7 CG11360 FBtr0310539|FBtr0089091 686039|686039 690650|689595 AGAGGCT 7mer-m8 dme-miR-282-5p 4 + 689229 689273 3'utr CG11360 FlyBase G42724.1 CAATCGAAAATTTGTAATAGAGGCTGGCTTATATATATTTAAATG 30 689246 0.875599858 5 30 230 1 1.653212514 0.022222222 0.4 0.6 30 0 0 45 4:689229-689273 7 42.5 5043 FBgn0039920 1210.836667 29.66666667 45.19333333 0.035099697 1.43258427 0.940404189 1 1 1 0.01 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 4 689631 689637 + 4_689631_689637_+ 0.620204031 0.620204031 0.620204031 0 CG11360 FBtr0310539 686039 690650 4 + 689612 689657 3'utr CG11360 FlyBase G56576.1 TTAAATAAAACGGTATCTATGGTGCTTATAACAAACTTGAACCATA 36 689631 0.773776222 2 36 292 1 1.633468456 0 0.194444444 0.325581395 36 0 0 43 4:689612-689657 7 CG11360 FBtr0310539 686039 690650 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 4 + 689615 689651 3'utr CG11360 FlyBase G42727.1 AATAAAACGGTATCTATGGTGCTTATAACAAACTTGA 18 689631 0.723881904 5 17 132 0.964285714 1.431363764 0.071428571 0.388888889 0.607142857 18 1 0 27 4:689615-689651 7 26.5 5044 FBgn0039920 1210.836667 29.66666667 45.19333333 0.021885693 0.893258427 0.586369671 0 0 0 0.01 dme-miR-277-3p 8mer-A1 TGCATTTA 4 690166 690173 + 4_690166_690173_+ 0.625364269 0.625364269 0.625364269 0 CG11360 FBtr0310539 686039 690650 4 + 690140 690230 3'utr CG11360 FlyBase G56577.1 ATTTTTGTACACAGTTTGTAAGGACTTGCATTTAACTTATAATTGGCGGCTAATACATTTACAACGAATGTTTTACTAATTCAAACGAGGT 28 690183 0.984369047 6 27 227 1 1.51851394 0 0.178571429 0.303030303 28 0 0 33 4:690140-690230 8 CG11360 FBtr0310539 686039 690650 TGCATTTA 8mer-A1 dme-miR-277-3p 4 + 690148 690202 3'utr CG11360 FlyBase G42728.1 ACACAGTTTGTAAGGACTTGCATTTAACTTATAATTGGCGGCTAATACATTTACA 13 690183 0.982570932 4 13 102 1 1.278753601 0.052631579 0.461538462 0.631578947 13 0 0 19 4:690148-690202 8 14 5045 FBgn0039920 1210.836667 29.66666667 45.19333333 0.011562253 0.471910112 0.309780204 -17 -17 -17 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC 4 690436 690442 + 4_690436_690442_+ 0.661615645 0.661615645 0.661615645 0 CG11360 FBtr0310539 686039 690650 4 + 690417 690460 3'utr CG11360 FlyBase G56578.1 AATATGAAAATATCCGTATTGTGTTCGACAAAAAGTAATATATC 19 690435 0.981184139 4 19 141 1 1.361727836 0 0.210526316 0.347826087 19 0 0 23 4:690417-690460 7 CG11360 FBtr0310539 686039 690650 TGTGTTC 7mer-m8 dme-miR-317-3p 4 + 690420 690448 3'utr CG11360 FlyBase G42729.1 ATGAAAATATCCGTATTGTGTTCGACAAA 11 690435 0.701129252 2 11 78 1 1.230448921 0 0.545454545 0.705882353 11 0 0 17 4:690420-690448 7 15 5046 FBgn0039920 1210.836667 29.66666667 45.19333333 0.012388128 0.505617978 0.331907361 1 1 1 0.01 dme-miR-263a-5p 6mer3-8 GTGCCA 4 691089 691094 - 4_691089_691094_- 1 1 1 0 myo FBtr0089095 690684 691990 4 - 690983 691145 3'utr myo FlyBase G57048.1 TGAAACTTATTCCGATTAGTTCCTACGATATAAGCTCGAATGCTTGGTTGAGTGCCAAAAAGAACTTATTTTTCTTATGCGTTATTTTCGAATCTTCTATTAACACTACTTGTCGCAGGATTGGCTTCTAAACGTTTGCAAGAGTACTTAGGAGTTGTCAATA 16 691100 0.983782635 12 16 133 1 1.204119983 0.1875 0 0 16 0 0 16 4:690983-691145 6 myo FBtr0089095 690684 691990 GTGCCA 6mer3-8 dme-miR-263a-5p 4 - 691074 691141 3'utr myo FlyBase G43111.1 ACTTATTCCGATTAGTTCCTACGATATAAGCTCGAATGCTTGGTTGAGTGCCAAAAAGAACTTATTTT 9 691094 0.972382134 7 8 55 1 1.079181246 0.416666667 0.222222222 0.416666667 9 0 0 12 4:691074-691141 6 5 5047 FBgn0026199 2431.316667 94.48333333 145.4933333 0.002056499 0.052919386 0.034365836 6 0 3 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG 4 778803 778808 - 4_778803_778808_- 0.999999861 1 0.99999993 7.07E-08 MED26 FBtr0089253|FBtr0089254 778514|778514 778826|778826 4 - 778782 778821 3'utr MED26 FlyBase G57074.1 ACGTTTCTTTCACGCTGTGTGATAACATTTCCGAAACAAA 12 778813 0.953319592 5 11 84 1 1.176091259 0.466666667 0.083333333 0.266666667 12 0 0 15 4:778782-778821 6 MED26 FBtr0089254|FBtr0089253 778514|778514 778826|778826 GCTGTG 6mer2-7 dme-miR-1008-3p 4 - 778780 778822 3'utr MED26 FlyBase G43129.1 GACGTTTCTTTCACGCTGTGTGATAACATTTCCGAAACAAAAA 7 778813 0.985128228 5 7 56 1 0.954242509 0.555555556 0.285714286 0.444444444 7 0 0 9 4:778780-778822 6 9 5048 FBgn0039923 1747.52 42.37333333 64.98333333 0.005150156 0.212397734 0.138497051 5 5 5 0.01 dme-miR-283-5p 6mer3-8 TGATAT 4 855396 855401 - 4_855396_855401_- 0.902658945 1 0.951329472 0.068830552 CG11148 FBtr0300886 853714 855509 4 - 855380 855469 5'utr CG11148 FlyBase G57100.1 AAATTTAAAATGTTATGAACTGCAGAATTGAAATAAACTTAGGTCACAAGATTATGTGCGTTAAACTCTGATATACCTAAATAAATATAT 32 855398 0.750894564 14 29 228 0.930232558 1.124938737 0.186046512 0.28125 0.465116279 32 1 2 40 4:855380-855469 6 CG11148 FBtr0300886 853714 855509 TGATAT 6mer3-8 dme-miR-283-5p 4 - 855379 855432 5'utr CG11148 FlyBase G43148.1 CTTAGGTCACAAGATTATGTGCGTTAAACTCTGATATACCTAAATAAATATATA 12 855400 0.985337594 5 9 89 0.666666667 1.079181246 0.111111111 0.25 0.5 12 6 0 12 4:855379-855432 6 13.5 5049 FBgn0039936 3661.476667 89.62 137.45 0.003687037 0.150636019 0.098217534 -3 -1 -2 0.01 dme-bantam-3p 7mer-m8 TGATCTC X 10077302 10077308 - X_10077302_10077308_- 0.661615243 0.661615243 0.661615243 0 ZAP3 FBtr0308584 10077004 10077349 X - 10077244 10077335 5'utr ZAP3 FlyBase G66210.1 GGCAGCAGCAGCGCAGGACCTGATCTTTGATCTCTGAACTCTGAACTCTGAACTCTGAACTCTGAACTCTGAACTCTGAACTCTGAACTCTG 90 10077301 0.988264536 8 82 753 0.902912621 1.366422957 0.233009709 0.133333333 0.242718447 90 7 3 93 X:10077244-10077335 7 ZAP3 FBtr0308584 10077004 10077349 TGATCTC 7mer-m8 dme-bantam-3p X - 10077278 10077335 5'utr ZAP3 FlyBase G49842.1 GGCAGCAGCAGCGCAGGACCTGATCTTTGATCTCTGAACTCTGAACTCTGAACTCTGA 70 10077301 0.986149418 6 66 555 0.944444444 1.309630167 0.175925926 0.4 0.611111111 70 2 4 102 X:10077278-10077335 7 79 5050 FBgn0052685 2208 46.58 71.55666667 0.035778986 1.69600687 1.104020124 -7 -7 -7 0.01 dme-bantam-3p 6mer2-7 GATCTC X 10206825 10206830 - X_10206825_10206830_- 1 1 1 0 CG15309 FBtr0071487|FBtr0112974|FBtr0332898|FBtr0332899|FBtr0332900 10206591|10206591|10205290|10205290|10205290 10207230|10207230|10207230|10207230|10207230 X - 10206805 10206844 3'utr CG15309 FlyBase G66232.1 GGGTTTTTGGGAAGGATCTCTGCGCTGGCCGCCATCTAGG 12 10206824 0.752897493 2 12 58 1 1.113943352 0.538461538 0.083333333 0.153846154 12 0 0 13 X:10206805-10206844 6 CG15309 FBtr0071487|FBtr0332900|FBtr0332899|FBtr0332898|FBtr0112974 10206591|10205290|10205290|10205290|10206591 10207230|10207230|10207230|10207230|10207230 GATCTC 6mer2-7 dme-bantam-3p X - 10206810 10206849 3'utr CG15309 FlyBase G49861.1 TGATTGGGTTTTTGGGAAGGATCTCTGCGCTGGCCGCCAT 17 10206824 0.810177968 3 16 108 1 1.414973348 0.346153846 0.411764706 0.615384615 17 0 0 26 X:10206810-10206849 6 14 5051 FBgn0030183 132.9233333 6.51 10.00333333 0.105323871 2.150537634 1.399533489 -6 -6 -6 0.01 dme-miR-308-3p 8mer-m1 CTGTGATT X 10237120 10237127 - X_10237120_10237127_- 0.385560641 0.385560641 0.385560641 0 Hk FBtr0331336|FBtr0307879 10233345|10234756 10239443|10239443 X - 10237096 10237148 3'utr Hk FlyBase G66235.1 AAAGTCTTTCTCACATACGGACTGTGATTTCATATAAAAGTAAACGTAAAAGT 32 10237120 0.898170289 6 32 225 1 1.579783597 0.131578947 0.125 0.263157895 32 0 0 38 X:10237096-10237148 8 Hk FBtr0331336|FBtr0307879 10233345|10234756 10239443|10239443 CTGTGATT 8mer-m1 dme-miR-308-3p X - 10237105 10237146 3'utr Hk FlyBase G49863.1 AGTCTTTCTCACATACGGACTGTGATTTCATATAAAAGTAAA 17 10237120 0.95820351 2 17 121 1 1.397940009 0.04 0.411764706 0.6 17 0 0 25 X:10237105-10237146 8 24.5 5052 FBgn0263220 189.6466667 3.833333333 5.9 0.129187612 6.391304348 4.152542373 -7 -7 -7 0.01 dme-miR-14-3p 6mer3-8 AAGACT X 10264306 10264311 - X_10264306_10264311_- 1 1 1 0 CG12643 FBtr0071481 10264231 10264840 X - 10264283 10264332 3'utr CG12643 FlyBase G66241.1 TTTAATTTGTATTTAGAGCTAAAGACTACAGTTTATACATTTTATGAATT 22 10264313 0.844661757 7 20 173 0.884615385 1.361727836 0.230769231 0.181818182 0.307692308 22 3 0 23 X:10264283-10264332 6 CG12643 FBtr0071481 10264231 10264840 AAGACT 6mer3-8 dme-miR-14-3p X - 10264282 10264337 3'utr CG12643 FlyBase G49865.1 ACGTATTTAATTTGTATTTAGAGCTAAAGACTACAGTTTATACATTTTATGAATTT 14 10264322 0.82261246 7 13 146 0.9 1.255272505 0.15 0.428571429 0.6 14 2 0 18 X:10264282-10264337 6 17 5053 FBgn0040942 927.6666667 110.47 167.3433333 0.018325548 0.153887933 0.101587555 2 11 6.5 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA X 10276698 10276703 - X_10276698_10276703_- 1 1 1 0 alpha-Man-I FBtr0300512|FBtr0300514|FBtr0299633|FBtr0300513|FBtr0299632|FBtr0300516|FBtr0300515|FBtr0300511|FBtr0331759 10266790|10276053|10276053|10276053|10276616|10276053|10276053|10266790|10276616 10277555|10277555|10277555|10277555|10277555|10277555|10277555|10277555|10277555 X - 10276649 10276741 3'utr alpha-Man-I FlyBase G66249.1 ATTTAAATATAAATCTAATATAGAGTCTAGCTTACTGTATGTGACGAAAGAAATGTAACGCAAATTACCTTAAATCGAGAACATCAAGCGAAA 76 10276706 0.866758461 6 76 513 1 1.986771734 0.051546392 0.236842105 0.402061856 76 0 0 97 X:10276649-10276741 6 alpha-Man-I FBtr0300515|FBtr0331759|FBtr0300511|FBtr0299632|FBtr0300516|FBtr0299633|FBtr0300513|FBtr0300512|FBtr0300514 10276053|10276616|10266790|10276616|10276053|10276053|10276053|10266790|10276053 10277555|10277555|10277555|10277555|10277555|10277555|10277555|10277555|10277555 ATGTGA 6mer3-8 dme-miR-1003-3p X - 10276664 10276732 3'utr alpha-Man-I FlyBase G49874.1 TAAATCTAATATAGAGTCTAGCTTACTGTATGTGACGAAAGAAATGTAACGCAAATTACCTTAAATCGA 43 10276706 0.856815318 4 42 273 0.964912281 1.740362689 0.175438596 0.209302326 0.403508772 43 2 0 55 X:10276664-10276732 6 33.5 5054 FBgn0259170 1144.146667 34.71333333 53.02333333 0.029279463 0.965047052 0.631797322 3 3 3 0.01 dme-miR-970-3p 6mer3-8 TCTTAT X 10277039 10277044 - X_10277039_10277044_- 0.998968335 1 0.999484167 0.000729522 alpha-Man-I FBtr0300512|FBtr0300514|FBtr0299633|FBtr0300513|FBtr0299632|FBtr0300516|FBtr0300515|FBtr0300511|FBtr0331759 10266790|10276053|10276053|10276053|10276616|10276053|10276053|10266790|10276616 10277555|10277555|10277555|10277555|10277555|10277555|10277555|10277555|10277555 X - 10277000 10277067 3'utr alpha-Man-I FlyBase G66251.1 GTGTAAATGTAAAACTCAGGTGTTCTTATTATGATTTTCCTTGCGCTCACACAAGGCACTTTTTCAAC 8 10277042 0.983767449 7 8 64 1 0.954242509 0.222222222 0.125 0.222222222 8 0 0 9 X:10277000-10277067 6 alpha-Man-I FBtr0300515|FBtr0331759|FBtr0300511|FBtr0299632|FBtr0300516|FBtr0299633|FBtr0300513|FBtr0300512|FBtr0300514 10276053|10276616|10266790|10276616|10276053|10276053|10276053|10266790|10276053 10277555|10277555|10277555|10277555|10277555|10277555|10277555|10277555|10277555 TCTTAT 6mer3-8 dme-miR-970-3p X - 10277038 10277061 3'utr alpha-Man-I FlyBase G49875.1 ATGTAAAACTCAGGTGTTCTTATT 6 10277042 0.686922715 2 6 47 1 0.903089987 0.25 0.166666667 0.375 6 0 0 8 X:10277038-10277061 6 5.5 5055 FBgn0259170 1144.146667 34.71333333 53.02333333 0.004807076 0.158440561 0.103727919 -2 -2 -2 0.01 dme-miR-283-5p 8mer-A1 TGATATTA X 10277097 10277104 - X_10277097_10277104_- 0.592192292 0.592192292 0.592192292 0 alpha-Man-I FBtr0300512|FBtr0300514|FBtr0299633|FBtr0300513|FBtr0299632|FBtr0300516|FBtr0300515|FBtr0300511|FBtr0331759 10266790|10276053|10276053|10276053|10276616|10276053|10276053|10266790|10276616 10277555|10277555|10277555|10277555|10277555|10277555|10277555|10277555|10277555 X - 10277083 10277189 3'utr alpha-Man-I FlyBase G66252.1 AATCCAAATAGTTGACAGAGGTGGATGGTGGGAAGACCTCAATTTCCATTTAAATGCGAATGACGTAGACGTAGGCAAAAACTCTTGATATTAATTATGATATGATA 53 10277105 0.857335094 9 52 380 0.982758621 1.755874856 0.25862069 0.094339623 0.172413793 53 1 0 57 X:10277083-10277189 8 alpha-Man-I FBtr0300515|FBtr0331759|FBtr0300511|FBtr0299632|FBtr0300516|FBtr0299633|FBtr0300513|FBtr0300512|FBtr0300514 10276053|10276616|10266790|10276616|10276053|10276053|10276053|10266790|10276053 10277555|10277555|10277555|10277555|10277555|10277555|10277555|10277555|10277555 TGATATTA 8mer-A1 dme-miR-283-5p X - 10277086 10277131 3'utr alpha-Man-I FlyBase G49876.1 AATGACGTAGACGTAGGCAAAAACTCTTGATATTAATTATGATATG 21 10277105 0.752342287 5 21 144 1 1.579783597 0.131578947 0.666666667 0.815789474 21 0 0 38 X:10277086-10277131 8 27 5056 FBgn0259170 1144.146667 34.71333333 53.02333333 0.023598373 0.777799117 0.509209782 1 1 1 0.01 dme-miR-7-5p 6mer2-7 TCTTCC X 10356748 10356753 - X_10356748_10356753_- 1 1 1 0 l(1)G0289 FBtr0347009 10348678 10357744 X - 10356721 10356794 5'utr l(1)G0289 FlyBase G66270.1 TTTGTGTGCGTGCGCGTTTTGCTGGACTCTTCGCTAAAAGTTCTTCCTCAAATTGTGTAATTGTATTTTCCTTC 22 10356772 0.778629481 10 19 213 0.884615385 0.884606581 0.192307692 0.181818182 0.307692308 22 1 2 23 X:10356721-10356794 6 l(1)G0289 FBtr0347009 10348678 10357744 TCTTCC 6mer2-7 dme-miR-7-5p X - 10356731 10356793 5'utr l(1)G0289 FlyBase G49887.1 TTGTGTGCGTGCGCGTTTTGCTGGACTCTTCGCTAAAAGTTCTTCCTCAAATTGTGTAATTGT 9 10356776 0.68762388 6 8 73 1 1.278753601 0.105263158 0.666666667 0.842105263 9 0 0 19 X:10356731-10356793 6 5.5 5057 FBgn0028331 5573.983333 212.8733333 325.9566667 0.000986727 0.025836961 0.016873409 19 23 21 0.01 dme-miR-252-5p 6mer3-8 GTACTT X 10356816 10356821 - X_10356816_10356821_- 1 1 1 0 l(1)G0289 FBtr0347009 10348678 10357744 X - 10356813 10356839 5'utr-coding l(1)G0289 FlyBase G66271.1 AGATGTCGAAGAAGGGCTGTACTTTCT 9 10356816 0.579371467 4 7 53 0.727272727 0.903089987 0.181818182 0.222222222 0.363636364 9 3 0 8 X:10356813-10356839 6 l(1)G0289 FBtr0347009 10348678 10357744 GTACTT 6mer3-8 dme-miR-252-5p X - 10356813 10356847 5'utr-coding l(1)G0289 FlyBase G49888.1 GCTTGAAAAGATGTCGAAGAAGGGCTGTACTTTCT 18 10356817 0.681137118 5 16 102 0.875 1.322219295 0.208333333 0.333333333 0.5 18 3 0 21 X:10356813-10356847 6 12.5 5058 FBgn0028331 5573.983333 212.8733333 325.9566667 0.002242561 0.058720366 0.038348656 -5 -4 -4.5 0.01 dme-bantam-3p 6mer3-8 TGATCT X 10357226 10357231 - X_10357226_10357231_- 1 1 1 0 l(1)G0289 FBtr0347009|FBtr0071470 10348678|10356827 10357744|10357744 X - 10357030 10357257 5'utr l(1)G0289 FlyBase G66273.2 GAAAGACGACTGGCAACAGCATGAAGTGATCTGTTAAATGTATCTTTTTACCTTTTTTACCGTACCGCCTGCCCATTAGAAGAAAAGCAAAAAAGAGAGAGAGAAAAAAAATGTATAATAATAATGAATAATACCCCAGAAGACAACTCAACTATTGTATAACTCTGAGACCAACGGCTCCCACCAGGCCACGCACACATCCATACCTAAAGCACACACACACACACT 104 10357226 0.965407144 23 93 494 0.880952381 1.744292983 0.158730159 0.201923077 0.341269841 104 14 1 111 X:10357030-10357257 6 l(1)G0289 FBtr0071470|FBtr0347009 10356827|10348678 10357744|10357744 TGATCT 6mer3-8 dme-bantam-3p X - 10357204 10357257 5'utr l(1)G0289 FlyBase G49889.2 GAAAGACGACTGGCAACAGCATGAAGTGATCTGTTAAATGTATCTTTTTACCTT 36 10357226 0.646513221 8 33 224 0.966101695 1.755874856 0.152542373 0.472222222 0.677966102 36 2 0 57 X:10357204-10357257 6 40.5 5059 FBgn0028331 5573.983333 212.8733333 325.9566667 0.007265899 0.190253985 0.124249645 -5 -5 -5 0.01 dme-miR-1012-3p 6mer3-8 TTGACT X 10357294 10357299 - X_10357294_10357299_- 1 0.999999584 0.999999792 2.83E-07 l(1)G0289 FBtr0347009|FBtr0071470 10348678|10356827 10357744|10357744 X - 10357273 10357411 5'utr-coding l(1)G0289 FlyBase G66274.1 ACTGATTGTTGAGATTTAGCTCAGAACGCTGCCGAAACCGAACAAAACAACAACTAAAAAAAGAAATGAAAGCAATTTAGAAGTGTAAAGTATAGACACAGGACCTGAGTTCTTGACTCCCAGTCCCCCGGAACCAACT 20 10357298 0.959457343 13 19 86 0.909090909 1.301029996 0.045454545 0.1 0.181818182 20 2 0 20 X:10357273-10357411 6 l(1)G0289 FBtr0071470|FBtr0347009 10356827|10348678 10357744|10357744 TTGACT 6mer3-8 dme-miR-1012-3p X - 10357269 10357329 5'utr l(1)G0289 FlyBase G49890.1 GTGTAAAGTATAGACACAGGACCTGAGTTCTTGACTCCCAGTCCCCCGGAACCAACTGCTC 8 10357320 0.953472452 4 6 33 0.833333333 0.698970004 0.166666667 0.375 0.583333333 8 1 1 10 X:10357269-10357329 6 3.5 5060 FBgn0028331 5573.983333 212.8733333 325.9566667 0.000627917 0.016441702 0.010737624 -1 21 10 0.01 dme-miR-304-5p 7mer-m8 TGAGATT X 10357396 10357402 - X_10357396_10357402_- 0.620203442 0.620203442 0.620203442 0 l(1)G0289 FBtr0347009|FBtr0071470|FBtr0347008 10348678|10356827|10357355 10357744|10357744|10357744 X - 10357273 10357411 5'utr-coding l(1)G0289 FlyBase G66274.1 ACTGATTGTTGAGATTTAGCTCAGAACGCTGCCGAAACCGAACAAAACAACAACTAAAAAAAGAAATGAAAGCAATTTAGAAGTGTAAAGTATAGACACAGGACCTGAGTTCTTGACTCCCAGTCCCCCGGAACCAACT 20 10357382 0.959457343 13 19 86 0.909090909 1.301029996 0.045454545 0.1 0.181818182 20 2 0 20 X:10357273-10357411 7 l(1)G0289 FBtr0347008|FBtr0071470|FBtr0347009 10357355|10356827|10348678 10357744|10357744|10357744 TGAGATT 7mer-m8 dme-miR-304-5p X - 10357372 10357417 5'utr l(1)G0289 FlyBase G49891.1 TTTTGAACTGATTGTTGAGATTTAGCTCAGAACGCTGCCGAAACCG 7 10357403 0.948855179 4 7 55 1 0.903089987 0 0.142857143 0.25 7 0 0 8 X:10357372-10357417 7 5.5 5061 FBgn0028331 5573.983333 212.8733333 325.9566667 0.000986727 0.025836961 0.016873409 -20 1 -9.5 0.01 dme-miR-11-3p 7mer-m1 TGTGATG X 10357459 10357465 - X_10357459_10357465_- 0.612071107 0.612071121 0.612071114 0 l(1)G0289 FBtr0347009|FBtr0071470|FBtr0347008 10348678|10356827|10357355 10357744|10357744|10357744 X - 10357427 10357478 5'utr l(1)G0289 FlyBase G66275.1 ACCCGTCTGTAATTGTGATGTGTTCCATGATGCGTCCACAATGTCAACCAAA 13 10357466 0.986179769 5 12 101 1 1.176091259 0.133333333 0.153846154 0.266666667 13 0 0 15 X:10357427-10357478 7 l(1)G0289 FBtr0347008|FBtr0071470|FBtr0347009 10357355|10356827|10348678 10357744|10357744|10357744 TGTGATG 7mer-m1 dme-miR-11-3p X - 10357439 10357485 5'utr l(1)G0289 FlyBase G49892.1 ATTTGAAACCCGTCTGTAATTGTGATGTGTTCCATGATGCGTCCACA 12 10357466 0.977470675 7 10 88 0.75 1.079181246 0.3125 0.25 0.4375 12 4 0 12 X:10357439-10357485 7 10 5062 FBgn0028331 5573.983333 212.8733333 325.9566667 0.001794049 0.046976293 0.030678925 1 1 1 0.01 dme-miR-980-3p 6mer3-8 GGCAGC X 10384193 10384198 - X_10384193_10384198_- 1 1 1 0 Psf3 FBtr0071465|FBtr0346350|FBtr0333306 10383869|10383351|10383351 10384285|10384285|10384285 X - 10384133 10384246 3'utr Psf3 FlyBase G66289.1 TGTGGAACTGTAGCAACTTTATTTCGTCCATTCGTTCGGTGGCCATAGGGCAGCCTGACCTCTCAAAAATACACTTTTCATCTACTCTATGCACACGGCTAAATCCATTTGTAC 63 10384225 0.989174212 11 57 543 0.933333333 1.367976785 0.146666667 0.142857143 0.28 63 3 2 70 X:10384133-10384246 6 Psf3 FBtr0071465|FBtr0346350|FBtr0333306 10383869|10383351|10383351 10384285|10384285|10384285 GGCAGC 6mer3-8 dme-miR-980-3p X - 10384167 10384264 3'utr Psf3 FlyBase G49899.1 AACAGACCACTGATGTACTGTGGAACTGTAGCAACTTTATTTCGTCCATTCGTTCGGTGGCCATAGGGCAGCCTGACCTCTCAAAAATACACTTTTCA 36 10384225 0.986500472 13 32 273 0.87755102 1.633468456 0.142857143 0.305555556 0.489795918 36 6 0 43 X:10384167-10384264 6 7 5063 FBgn0030196 159.0833333 12.95 19.58333333 0.044002095 0.540540541 0.357446809 27 27 27 0.01 dme-miR-34-5p 6mer3-8 CACTGC X 10463750 10463755 - X_10463750_10463755_- 1 1 1 0 nocte FBtr0332953 10461863 10464452 X - 10463735 10463779 3'utr nocte FlyBase G66291.1 AAGAAAAACAAAACGAACCTTTGGCACTGCGTATGCTTTAATTTC 30 10463759 0.946578925 6 30 128 1 1.612783857 0 0.233333333 0.43902439 30 0 0 41 X:10463735-10463779 6 nocte FBtr0332953 10461863 10464452 CACTGC 6mer3-8 dme-miR-34-5p X - 10463739 10463775 3'utr nocte FlyBase G49900.1 AAAACAAAACGAACCTTTGGCACTGCGTATGCTTTAA 14 10463759 0.942634995 4 14 59 1 1.361727836 0 0.428571429 0.652173913 14 0 0 23 X:10463739-10463775 6 21.5 5064 FBgn0261710 3253.496667 44.13333333 68.01666667 0.006608275 0.487160121 0.316098995 4 4 4 0.01 dme-miR-33-5p 7mer-A1 AATGCAA X 10463983 10463989 - X_10463983_10463989_- 0.782911824 0.782911824 0.782911824 0 nocte FBtr0071460|FBtr0332953|FBtr0307488|FBtr0071461 10463816|10461863|10463816|10463816 10464452|10464452|10464452|10464452 X - 10463934 10464009 3'utr nocte FlyBase G66293.1 AAACGAGTAAGGAATACCTAAATGCAAGAAGAAATATTTAACAAAAATGAACAGAATACAACACCATGCCACACCA 12 10463989 0.917418033 6 12 40 1 1.113943352 0.384615385 0.083333333 0.153846154 12 0 0 13 X:10463934-10464009 7 nocte FBtr0071461|FBtr0307488|FBtr0332953|FBtr0071460 10463816|10463816|10461863|10463816 10464452|10464452|10464452|10464452 AATGCAA 7mer-A1 dme-miR-33-5p X - 10463975 10464034 3'utr nocte FlyBase G49902.1 AAGACGAAAGTTAAGAATCAACAGGAAACGAGTAAGGAATACCTAAATGCAAGAAGAAAT 8 10463988 0.801798429 3 7 17 1 1.113943352 0.076923077 0.5 0.692307692 8 0 0 13 X:10463975-10464034 7 7.5 5065 FBgn0261710 3253.496667 44.13333333 68.01666667 0.002305212 0.169939577 0.110267091 0 -1 -0.5 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT X 10464137 10464142 - X_10464137_10464142_- 1 1 1 0 nocte FBtr0071460|FBtr0332953|FBtr0307488|FBtr0071461 10463816|10461863|10463816|10463816 10464452|10464452|10464452|10464452 X - 10464089 10464171 3'utr nocte FlyBase G66294.1 AAGGGGCGATGCGAGTAGAATAGTGCTATAGCTGTTTGGGGGAATCCCCGTCACAATCGCAAAATGGCAACTCAGCTAAATCA 50 10464135 0.986726075 6 48 322 0.982758621 1.755874856 0.206896552 0.12 0.24137931 50 1 0 57 X:10464089-10464171 6 nocte FBtr0071461|FBtr0307488|FBtr0332953|FBtr0071460 10463816|10463816|10461863|10463816 10464452|10464452|10464452|10464452 AGCTGT 6mer3-8 dme-miR-1008-3p X - 10464094 10464174 3'utr nocte FlyBase G49903.1 TGAAAGGGGCGATGCGAGTAGAATAGTGCTATAGCTGTTTGGGGGAATCCCCGTCACAATCGCAAAATGGCAACTCAGCTA 38 10464135 0.97276488 7 35 193 0.943396226 1.698970004 0.150943396 0.236842105 0.452830189 38 3 0 50 X:10464094-10464174 6 30 5066 FBgn0261710 3253.496667 44.13333333 68.01666667 0.009220849 0.679758308 0.441068366 -7 -7 -7 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA X 10482440 10482447 - X_10482440_10482447_- 0.64356572 0.64356572 0.64356572 0 CG32687 FBtr0336901|FBtr0071458 10482026|10482026 10482859|10482859 X - 10482411 10482474 3'utr CG32687 FlyBase G66325.1 TGTTACTCACACACCTACACAATCTATACCAAAGAAACTCGACTGGCTTTCACTGGGCAAAAAC 44 10482448 0.952694666 7 37 173 0.851851852 0.963787827 0.018518519 0.181818182 0.333333333 44 4 4 46 X:10482411-10482474 8 CG32687 FBtr0071458|FBtr0336901 10482026|10482026 10482859|10482859 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X - 10482405 10482464 3'utr CG32687 FlyBase G49922.1 ACACCTACACAATCTATACCAAAGAAACTCGACTGGCTTTCACTGGGCAAAAACAAATAG 40 10482448 0.949922093 5 34 149 0.821428571 1.185636577 0 0.325 0.517857143 40 8 2 46 X:10482405-10482464 8 40 5067 FBgn0052687 315.3033333 16.03666667 24.44666667 0.126861964 2.494283933 1.63621489 1 1 1 0.01 dme-miR-317-3p 6mer3-8 TGTGTT X 10482485 10482490 - X_10482485_10482490_- 0.999999936 0.999999984 0.99999996 7.07E-08 CG32687 FBtr0336901|FBtr0071458 10482026|10482026 10482859|10482859 X - 10482476 10482566 3'utr CG32687 FlyBase G66326.1 CACACGTTACCAATTTGAACTAGTTTGCTAAGTGATTACACGACCTGTTTGCTTGCTCGCCTTGCGTGCCAATTTCTGTGTTTCTGTTTGC 20 10482519 0.697209296 12 19 168 0.913043478 1.322219295 0.173913043 0.15 0.260869565 20 2 0 21 X:10482476-10482566 6 CG32687 FBtr0071458|FBtr0336901 10482026|10482026 10482859|10482859 TGTGTT 6mer3-8 dme-miR-317-3p X - 10482473 10482570 3'utr CG32687 FlyBase G49923.1 TCTTCACACGTTACCAATTTGAACTAGTTTGCTAAGTGATTACACGACCTGTTTGCTTGCTCGCCTTGCGTGCCAATTTCTGTGTTTCTGTTTGCTTG 21 10482493 0.890878522 15 19 185 0.891891892 0.916453949 0.378378378 0.619047619 0.783783784 21 1 3 33 X:10482473-10482570 6 5.5 5068 FBgn0052687 315.3033333 16.03666667 24.44666667 0.01744352 0.342964041 0.224979547 29 3 16 0.01 dme-miR-8-3p 7mer-m8 CAGTATT X 10490625 10490631 - X_10490625_10490631_- 0.661615243 0.661615243 0.661615243 0 spri FBtr0336902|FBtr0310293|FBtr0310296|FBtr0310292|FBtr0336903|FBtr0112690|FBtr0310295|FBtr0336904|FBtr0310438 10490067|10490345|10490345|10490345|10490067|10490067|10490345|10490345|10490345 10490817|10490817|10490817|10490817|10490817|10490817|10490817|10490817|10490817 X - 10490576 10491026 stop_codon spri FlyBase G66339.1 TGTGCCGCATCATTGCGCACAAGGCGCGCATCACAAATCCGCAGGACTATGCGCTCTTTAAGCTGGTCGATGGCGAGGAGACGCTGCTGACGGACGCAGAGTGTCCGCAGGATGCCCGATTGGCGGCCAAGGGAAAGCATTGCATGCTGGCCTACAAGCGGATCGATGCCAAGATCGCCTGGCCGACCGCCCAGCTGGCAGGACACTGAATCATCAGCTCGGGGATGCACCCGATGCAAATATACGACATACCGCCCCGCCCGCTCTGCCCTTCTTGCTCACTAACCAAGCATATTTGATTAATAATTTATTATTATTACATTAAAATATACTTAGTAGCCTGTAAGTAAAGCTAATTAATGCTAATTAGAAAACATCTAATGTGTACTAAACATCAGTATTGAGTTAAGTGTGTTTTTTTTTCCTGACCCACGGGTCAAGCCCCCTTTTT 466 10490632 0.97491484 64 448 2790 0.961538462 2.021189299 0.166666667 0.135193133 0.261904762 466 17 4 525 X:10490576-10491026 7 spri FBtr0336903|FBtr0112690|FBtr0336904|FBtr0310295|FBtr0310438|FBtr0336902|FBtr0310293|FBtr0310296|FBtr0310292 10490067|10490067|10490345|10490345|10490345|10490067|10490345|10490345|10490345 10490817|10490817|10490817|10490817|10490817|10490817|10490817|10490817|10490817 CAGTATT 7mer-m8 dme-miR-8-3p X - 10490611 10490860 stop_codon spri FlyBase G49934.2 TGCCAAGATCGCCTGGCCGACCGCCCAGCTGGCAGGACACTGAATCATCAGCTCGGGGATGCACCCGATGCAAATATACGACATACCGCCCCGCCCGCTCTGCCCTTCTTGCTCACTAACCAAGCATATTTGATTAATAATTTATTATTATTACATTAAAATATACTTAGTAGCCTGTAAGTAAAGCTAATTAATGCTAATTAGAAAACATCTAATGTGTACTAAACATCAGTATTGAGTTAAGTGTGTT 280 10490632 0.928461665 40 255 1741 0.919047619 1.8876173 0.164285714 0.371428571 0.580952381 280 30 4 386 X:10490611-10490860 7 129 5069 FBgn0085443 1112.173333 25.35666667 38.71333333 0.115989114 5.087419482 3.332185294 1 1 1 0.01 dme-miR-31a-5p 6mer3-8 TCTTGC X 10490749 10490754 - X_10490749_10490754_- 1 1 1 0 spri FBtr0336902|FBtr0310293|FBtr0310296|FBtr0310292|FBtr0336903|FBtr0112690|FBtr0310295|FBtr0336904|FBtr0310438 10490067|10490345|10490345|10490345|10490067|10490067|10490345|10490345|10490345 10490817|10490817|10490817|10490817|10490817|10490817|10490817|10490817|10490817 X - 10490576 10491026 stop_codon spri FlyBase G66339.1 TGTGCCGCATCATTGCGCACAAGGCGCGCATCACAAATCCGCAGGACTATGCGCTCTTTAAGCTGGTCGATGGCGAGGAGACGCTGCTGACGGACGCAGAGTGTCCGCAGGATGCCCGATTGGCGGCCAAGGGAAAGCATTGCATGCTGGCCTACAAGCGGATCGATGCCAAGATCGCCTGGCCGACCGCCCAGCTGGCAGGACACTGAATCATCAGCTCGGGGATGCACCCGATGCAAATATACGACATACCGCCCCGCCCGCTCTGCCCTTCTTGCTCACTAACCAAGCATATTTGATTAATAATTTATTATTATTACATTAAAATATACTTAGTAGCCTGTAAGTAAAGCTAATTAATGCTAATTAGAAAACATCTAATGTGTACTAAACATCAGTATTGAGTTAAGTGTGTTTTTTTTTCCTGACCCACGGGTCAAGCCCCCTTTTT 466 10490752 0.97491484 64 448 2790 0.961538462 2.021189299 0.166666667 0.135193133 0.261904762 466 17 4 525 X:10490576-10491026 6 spri FBtr0336903|FBtr0112690|FBtr0336904|FBtr0310295|FBtr0310438|FBtr0336902|FBtr0310293|FBtr0310296|FBtr0310292 10490067|10490067|10490345|10490345|10490345|10490067|10490345|10490345|10490345 10490817|10490817|10490817|10490817|10490817|10490817|10490817|10490817|10490817 TCTTGC 6mer3-8 dme-miR-31a-5p X - 10490611 10490860 stop_codon spri FlyBase G49934.2 TGCCAAGATCGCCTGGCCGACCGCCCAGCTGGCAGGACACTGAATCATCAGCTCGGGGATGCACCCGATGCAAATATACGACATACCGCCCCGCCCGCTCTGCCCTTCTTGCTCACTAACCAAGCATATTTGATTAATAATTTATTATTATTACATTAAAATATACTTAGTAGCCTGTAAGTAAAGCTAATTAATGCTAATTAGAAAACATCTAATGTGTACTAAACATCAGTATTGAGTTAAGTGTGTT 280 10490752 0.928461665 40 255 1741 0.919047619 1.8876173 0.164285714 0.371428571 0.580952381 280 30 4 386 X:10490611-10490860 6 90.5 5070 FBgn0085443 1112.173333 25.35666667 38.71333333 0.081372208 3.56908111 2.337695884 -2 -2 -2 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG X 10598562 10598567 - X_10598562_10598567_- 1 1 1 0 CG1628 FBtr0071510|FBtr0310444 10598457|10598144 10598642|10598642 X - 10598542 10598604 3'utr CG1628 FlyBase G66368.1 CCGCTGCGGTCCGATTGCGGGGATCCGGGAGCAAGACGCTGTGCTAGTAGTTGTCGGCCGCGG 11 10598560 0.950517348 6 11 46 1 1.079181246 0.166666667 0.090909091 0.166666667 11 0 0 12 X:10598542-10598604 6 CG1628 FBtr0071510|FBtr0310444 10598457|10598144 10598642|10598642 GCTGTG 6mer2-7 dme-miR-1008-3p X - 10598545 10598587 3'utr CG1628 FlyBase G49957.1 CGGGGATCCGGGAGCAAGACGCTGTGCTAGTAGTTGTCGGCCG 9 10598560 0.896690434 2 8 33 1 1.176091259 0.133333333 0.444444444 0.666666667 9 0 0 15 X:10598545-10598587 6 8.5 5071 FBgn0030218 200.96 16.58666667 25.59 0.042296975 0.512459807 0.332161 -7 -7 -7 0.01 dme-miR-1002-5p 6mer3-8 CTACTT X 10713148 10713153 - X_10713148_10713153_- 0.999996529 0.999993162 0.999994845 2.33E-06 CG32676 FBtr0071503|FBtr0333017 10713113|10711161 10714398|10714398 X - 10713126 10713268 3'utr CG32676 FlyBase G66371.1 TTTGTCCTACACTTACTATTATAACCCAATTCAACAAATGCAATTAGATCTAGGCGAGTTTAACTTTTAAACTTTTGAGTTGGTTTCATTTGTCTTTGCCTCGTGTGCACCACAACTACTTGATTTCAATAAATGTTTAGTAA 57 10713149 0.765821197 17 53 456 0.947368421 1.857332496 0.065789474 0.280701754 0.460526316 57 4 0 72 X:10713126-10713268 6 CG32676 FBtr0333017|FBtr0071503 10711161|10713113 10714398|10714398 CTACTT 6mer3-8 dme-miR-1002-5p X - 10713126 10713250 3'utr CG32676 FlyBase G49961.1 TTATAACCCAATTCAACAAATGCAATTAGATCTAGGCGAGTTTAACTTTTAAACTTTTGAGTTGGTTTCATTTGTCTTTGCCTCGTGTGCACCACAACTACTTGATTTCAATAAATGTTTAGTAA 55 10713149 0.829515114 16 49 460 0.911392405 1.255272505 0.164556962 0.381818182 0.569620253 55 4 3 72 X:10713126-10713250 6 24.5 5072 FBgn0052676 977.3866667 21.50333333 32.91666667 0.025066845 1.139358239 0.744303797 -4 -4 -4 0.01 dme-miR-92b-3p 7mer-m1 TGCAATT X 10713389 10713395 - X_10713389_10713395_- 0.765586663 0.765586663 0.765586663 0 CG32676 FBtr0071503|FBtr0333017 10713113|10711161 10714398|10714398 X - 10713329 10713428 3'utr CG32676 FlyBase G66372.1 ATTAGTTAGTAAGACTATGTTTTCTATTCATTTTGCAATTATCATTACACTTATAATTACCAATTGGATTAGTTAAGTTGCGCAATGGAAGCGTCTGAGA 17 10713407 0.992156932 6 16 182 0.947368421 1.255272505 0.105263158 0.117647059 0.210526316 17 1 0 18 X:10713329-10713428 7 CG32676 FBtr0333017|FBtr0071503 10711161|10713113 10714398|10714398 TGCAATT 7mer-m1 dme-miR-92b-3p X - 10713393 10713426 3'utr CG32676 FlyBase G49963.1 TAGTTAGTAAGACTATGTTTTCTATTCATTTTGC 8 10713389 0.587744676 3 7 92 1 1.204119983 0.375 0.625 0.8125 8 0 0 16 X:10713393-10713426 2 13.5 5073 FBgn0052676 977.3866667 21.50333333 32.91666667 0.013812343 0.627809642 0.410126582 12 -6 3 0.01 dme-miR-317-3p 6mer3-8 TGTGTT X 10713493 10713498 - X_10713493_10713498_- 1 1 1 0 CG32676 FBtr0071503|FBtr0333017 10713113|10711161 10714398|10714398 X - 10713434 10713525 3'utr CG32676 FlyBase G66373.1 TTTTTATATATACTTTATCACCAAGAATGTGTTTCGAAACGCGCCGGTAAAGACGAGCGACGAATTGAATTTTGTTCACCTACACCTATACT 253 10713498 0.893785506 17 242 1867 0.942176871 2.442479769 0.068027211 0.138339921 0.258503401 253 17 0 277 X:10713434-10713525 6 CG32676 FBtr0333017|FBtr0071503 10711161|10713113 10714398|10714398 TGTGTT 6mer3-8 dme-miR-317-3p X - 10713434 10713522 3'utr CG32676 FlyBase G49963.2 TTATATATACTTTATCACCAAGAATGTGTTTCGAAACGCGCCGGTAAAGACGAGCGACGAATTGAATTTTGTTCACCTACACCTATACT 120 10713498 0.898102788 14 115 851 0.967032967 2.245512668 0.032967033 0.408333333 0.60989011 120 6 0 176 X:10713434-10713522 6 168.5 5074 FBgn0052676 977.3866667 21.50333333 32.91666667 0.172398505 7.835994419 5.118987342 0 0 0 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT X 10713644 10713650 - X_10713644_10713650_- 0.657333379 0.657987844 0.657660612 0.000462731 CG32676 FBtr0071503|FBtr0333017 10713113|10711161 10714398|10714398 X - 10713538 10713680 3'utr CG32676 FlyBase G66374.1 ACACGATCACACACACACACACCTGGCTTTGGCAGCTTTATGTTATGTTTAACTTTAATAACCGACGGCGGGCTGAATGAAAATCTGCACCAGCGACTGCGATGTGGCGCTTTAACCTAATTTGCCTTAATAGAAAATCGTTT 137 10713651 0.984223356 17 126 1046 0.924528302 1.69019608 0.044025157 0.116788321 0.238993711 137 10 2 147 X:10713538-10713680 7 CG32676 FBtr0333017|FBtr0071503 10711161|10713113 10714398|10714398 GGCAGCT 7mer-m8 dme-miR-980-3p X - 10713625 10713678 3'utr CG32676 FlyBase G49965.1 ACGATCACACACACACACACCTGGCTTTGGCAGCTTTATGTTATGTTTAACTTT 75 10713651 0.691063469 8 73 588 0.971962617 2.017033339 0.018691589 0.36 0.551401869 75 3 0 104 X:10713625-10713678 7 89 5075 FBgn0052676 977.3866667 21.50333333 32.91666667 0.091059151 4.138893195 2.703797468 1 1 1 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA X 10748666 10748671 + X_10748666_10748671_+ 1 1 1 0 ras FBtr0332294|FBtr0332294|FBtr0071494|FBtr0071494|FBtr0071495|FBtr0071495|FBtr0343043|FBtr0343043 10748202|10748202|10748202|10748202|10748202|10748202|10748202|10748202 10749097|10749097|10748806|10748806|10748806|10748806|10748806|10748806 X + 10748615 10748686 3'utr ras FlyBase G60294.1 CTTCAACTATTCGCTATATATATCTAAAGCGCAACGCGTTGGTTGGCCGCTTACTTATTTTGCACGCTATAT 13 10748657 0.989709099 7 12 119 0.928571429 0.812913357 0.357142857 0.076923077 0.142857143 13 0 1 13 X:10748615-10748686 6 ras FBtr0071495|FBtr0071495|FBtr0343043|FBtr0343043|FBtr0332294|FBtr0332294|FBtr0071494|FBtr0071494 10748202|10748202|10748202|10748202|10748202|10748202|10748202|10748202 10748806|10748806|10748806|10748806|10749097|10749097|10748806|10748806 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" X + 10748649 10748685 3'utr ras FlyBase G45573.1 CGCGTTGGTTGGCCGCTTACTTATTTTGCACGCTATA 8 10748666 0.892106905 4 7 64 0.9 0.954242509 0.1 0.25 0.4 8 1 0 9 X:10748649-10748685 6 8.5 5076 FBgn0003204 319.3466667 15.79333333 24.27333333 0.026616843 0.538201773 0.350178522 9 0 4.5 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA X 10748781 10748786 + X_10748781_10748786_+ 1 1 1 0 ras FBtr0332294|FBtr0071494|FBtr0071495|FBtr0343043 10748202|10748202|10748202|10748202 10749097|10748806|10748806|10748806 X + 10748742 10748797 3'utr ras FlyBase G60295.1 AGCTAGCTTCAAGTTTTAAAACTCTGCCAAACTTATTAAATGTGAACTGAAACTAA 12 10748781 0.958213695 7 12 62 1 1.146128036 0 0.166666667 0.285714286 12 0 0 14 X:10748742-10748797 6 ras FBtr0071495|FBtr0343043|FBtr0332294|FBtr0071494 10748202|10748202|10748202|10748202 10748806|10748806|10749097|10748806 ATGTGA 6mer3-8 dme-miR-1003-3p X + 10748773 10748801 3'utr ras FlyBase G45574.1 CTTATTAAATGTGAACTGAAACTAACTGA 9 10748781 0.634579243 5 9 51 1 1.146128036 0 0.333333333 0.571428571 9 0 0 14 X:10748773-10748801 6 8 5077 FBgn0003204 319.3466667 15.79333333 24.27333333 0.025051146 0.506542845 0.329579786 0 0 0 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA X 10760146 10760151 - X_10760146_10760151_- 1 1 1 0 Tango5 FBtr0071501|FBtr0346377|FBtr0071499|FBtr0334457|FBtr0071500|FBtr0300569 10760046|10760046|10760046|10760046|10760046|10760046 10760485|10760485|10760485|10760485|10760485|10760485 X - 10760123 10760177 3'utr Tango5 FlyBase G66397.1 TAGTCGCGACTAATGAAAAGCAAATTGTGCAAAAGACAAACCAGCCAGAGTAAGC 42 10760153 0.869114202 4 42 110 1 1.755874856 0.157894737 0.238095238 0.438596491 42 0 0 57 X:10760123-10760177 6 Tango5 FBtr0071500|FBtr0300569|FBtr0071499|FBtr0334457|FBtr0071501|FBtr0346377 10760046|10760046|10760046|10760046|10760046|10760046 10760485|10760485|10760485|10760485|10760485|10760485 GTGCAA 6mer3-8 dme-miR-92b-3p X - 10760126 10760238 3'utr Tango5 FlyBase G49976.1 CCTTAGCAATTTTCCGTGTGAGTTCGTTTAACTAAAGTAACGAAAGTGAGGGAGACGCAGCTAGTCGCGACTAATGAAAAGCAAATTGTGCAAAAGACAAACCAGCCAGAGTA 30 10760153 0.914245324 5 29 102 0.979166667 1.371067862 0.166666667 0.333333333 0.583333333 30 0 1 47 X:10760126-10760238 6 33.5 5078 FBgn0052675 1144.95 61.17 93.45 0.02925892 0.547654079 0.358480471 2 2 2 0.01 dme-bantam-3p 6mer3-8 TGATCT X 10760456 10760461 - X_10760456_10760461_- 1 1 1 0 Tango5 FBtr0071501|FBtr0346377|FBtr0071499|FBtr0334457|FBtr0071500|FBtr0300569 10760046|10760046|10760046|10760046|10760046|10760046 10760485|10760485|10760485|10760485|10760485|10760485 X - 10760301 10760481 3'utr Tango5 FlyBase G66399.1 TCAGTGGATCAGTCTTCTGTTGATCTTTTTCCCCAACCCTTGGTTTTCGTTTAAATTATTTTGTATATTGCGGCTTTCGCTCTTAGTCAAATGATGTATCTTATGTGAGTGTGTCGGCGAGAGAAAAGGAGACGGCGTGGAAGCCTGAGGAATTTACCATGTAGACTAGACTAGGGAAAAA 65 10760454 0.982050376 22 63 567 0.948717949 1.86923172 0.256410256 0.138461538 0.282051282 65 4 0 74 X:10760301-10760481 6 Tango5 FBtr0071500|FBtr0300569|FBtr0071499|FBtr0334457|FBtr0071501|FBtr0346377 10760046|10760046|10760046|10760046|10760046|10760046 10760485|10760485|10760485|10760485|10760485|10760485 TGATCT 6mer3-8 dme-bantam-3p X - 10760436 10760482 3'utr Tango5 FlyBase G49978.2 ATCAGTGGATCAGTCTTCTGTTGATCTTTTTCCCCAACCCTTGGTTT 26 10760461 0.6119772 7 23 280 0.875 1.243038049 0.05 0.461538462 0.65 26 4 1 35 X:10760436-10760482 6 27 5079 FBgn0052675 1144.95 61.17 93.45 0.023581816 0.44139284 0.288924559 -7 0 -3.5 0.01 dme-bantam-3p 6mer3-8 TGATCT X 10765283 10765288 - X_10765283_10765288_- 1 1 1 0 Atg8a FBtr0346376|FBtr0346375|FBtr0071498 10764876|10764876|10764876 10765457|10765457|10765457 X - 10765258 10765367 3'utr Atg8a FlyBase G66408.1 AGCTTACAATATGGACGGCGAGTTAGCTAAACGAATTGAGGAAAACCGCAGGAAATGCCACATGAAAAGAACTTGAAATTGATCTGATACGCAGGGCAACAAAAAAAATC 193 10765289 0.968635469 12 189 1051 0.982142857 1.865301426 0.138392857 0.139896373 0.258928571 193 2 2 220 X:10765258-10765367 6 Atg8a FBtr0071498|FBtr0346375|FBtr0346376 10764876|10764876|10764876 10765457|10765457|10765457 TGATCT 6mer3-8 dme-bantam-3p X - 10765263 10765383 3'utr Atg8a FlyBase G49986.1 TTGTGTTTAGCATGCAAGCTTACAATATGGACGGCGAGTTAGCTAAACGAATTGAGGAAAACCGCAGGAAATGCCACATGAAAAGAACTTGAAATTGATCTGATACGCAGGGCAACAAAAA 86 10765289 0.970000449 13 81 461 0.953125 1.609238576 0.15625 0.38372093 0.5859375 86 4 2 122 X:10765263-10765383 6 122 5080 FBgn0052672 2319.966667 259.7 395.21 0.052586962 0.469772815 0.308696642 1 1 1 0.01 dme-miR-252-5p 6mer3-8 GTACTT X 10771103 10771108 + X_10771103_10771108_+ 1 0.999999995 0.999999997 0 BTBD9 FBtr0071497|FBtr0334456 10771071|10771071 10771699|10772154 X + 10771079 10771140 3'utr BTBD9 FlyBase G60303.1 CGCCGCTGCGGCCGATAATGTTTTGTACTTGAAATACTCCTGTGGTCTGTTAGCTGTTAGTC 44 10771127 0.686486621 11 43 388 1 1.740362689 0.236363636 0.159090909 0.327272727 44 0 0 55 X:10771079-10771140 6 BTBD9 FBtr0334456|FBtr0071497 10771071|10771071 10772154|10771699 GTACTT 6mer3-8 dme-miR-252-5p X + 10771082 10771140 3'utr BTBD9 FlyBase G45580.1 CGCTGCGGCCGATAATGTTTTGTACTTGAAATACTCCTGTGGTCTGTTAGCTGTTAGTC 23 10771127 0.988184706 8 23 216 1 1.51851394 0.333333333 0.347826087 0.545454545 23 0 0 33 X:10771082-10771140 6 16 5081 FBgn0030228 130.9633333 5.32 8.203333333 0.1221716 3.007518797 1.950426656 -24 -24 -24 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 10771183 10771189 + X_10771183_10771189_+ 0.66161551 0.661615511 0.661615511 0 BTBD9 FBtr0071497|FBtr0334456 10771071|10771071 10771699|10772154 X + 10771149 10771230 3'utr BTBD9 FlyBase G60304.1 TAGTTATATTTTGCAGACCGTGCTGCTCTTGTTATCTAGTCCTTCCCAGTGCCCCAATGCTTGGTGGTTCCAAAACCTGTGC 92 10771191 0.753327288 17 85 889 0.91509434 1.50965048 0.103773585 0.152173913 0.264150943 92 7 2 97 X:10771149-10771230 7 BTBD9 FBtr0334456|FBtr0071497 10771071|10771071 10772154|10771699 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X + 10771158 10771281 3'utr BTBD9 FlyBase G45581.1 TTTGCAGACCGTGCTGCTCTTGTTATCTAGTCCTTCCCAGTGCCCCAATGCTTGGTGGTTCCAAAACCTGTGCATTGCATATTGGTTTTGCGTTATTACCTTCGTTATATACTATATGTATATA 72 10771191 0.742343001 16 63 716 0.903508772 2.012837225 0.254385965 0.361111111 0.596491228 72 11 0 103 X:10771158-10771281 7 62 5082 FBgn0030228 130.9633333 5.32 8.203333333 0.473414951 11.65413534 7.557903291 -8 -8 -8 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 10771321 10771326 + X_10771321_10771326_+ 1 1 1 0 BTBD9 FBtr0071497|FBtr0071497|FBtr0071497|FBtr0334456|FBtr0334456|FBtr0334456 10771071|10771071|10771071|10771071|10771071|10771071 10771699|10771699|10771699|10772154|10772154|10772154 X + 10771304 10771400 3'utr BTBD9 FlyBase G60306.1 TGTTTTTATAATTTTATTGTGATCCAAAAATAATTCCTTATGTTTGCAAGGCAGCAGAGTTATTTATATAAGCAATATAACTGAATTCTATGCACAC 31 10771319 0.98590632 14 31 258 1 1.591064607 0.025641026 0.193548387 0.358974359 31 0 0 39 X:10771304-10771400 6 BTBD9 FBtr0334456|FBtr0334456|FBtr0334456|FBtr0071497|FBtr0071497|FBtr0071497 10771071|10771071|10771071|10771071|10771071|10771071 10772154|10772154|10772154|10771699|10771699|10771699 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X + 10771309 10771349 3'utr BTBD9 FlyBase G45582.1 TTATAATTTTATTGTGATCCAAAAATAATTCCTTATGTTTG 21 10771320 0.971924366 5 19 169 0.846153846 0.643452676 0.038461538 0.238095238 0.384615385 21 0 4 22 X:10771309-10771349 6 20.5 5083 FBgn0030228 130.9633333 5.32 8.203333333 0.156532363 3.853383459 2.498984153 2 1 1.5 0.01 dme-miR-970-3p 6mer2-7 CTTATG X 10771544 10771549 + X_10771544_10771549_+ 1 1 1 0 BTBD9 FBtr0071497|FBtr0334456 10771071|10771071 10771699|10772154 X + 10771460 10771567 3'utr BTBD9 FlyBase G60307.1 GCGAACTCGAATGCGATTTCCGAGCAGCTGAACCAAAATTGTATACGATATCCGATCGCATAGTATAAATCTGTACTGTCTAGCCTTATGTCCGGTCCATGTCCTTGT 18 10771550 0.97930014 12 18 122 1 1.342422681 0.181818182 0.222222222 0.363636364 18 0 0 22 X:10771460-10771567 6 BTBD9 FBtr0334456|FBtr0071497 10771071|10771071 10772154|10771699 CTTATG 6mer2-7 dme-miR-970-3p X + 10771510 10771564 3'utr BTBD9 FlyBase G45584.1 TCCGATCGCATAGTATAAATCTGTACTGTCTAGCCTTATGTCCGGTCCATGTCCT 12 10771549 0.738930404 6 9 92 0.8125 0.812913357 0.25 0.25 0.4375 12 2 1 13 X:10771510-10771564 6 8.5 5084 FBgn0030228 130.9633333 5.32 8.203333333 0.064903663 1.597744361 1.036164161 -6 -5 -5.5 0.01 dme-bantam-3p 6mer3-8 TGATCT X 10781452 10781457 - X_10781452_10781457_- 1 1 1 0 sesB FBtr0346384|FBtr0073423|FBtr0073422|FBtr0073421|FBtr0073424 10780991|10780991|10780991|10780991|10780891 10781620|10781620|10781620|10781620|10781620 X - 10781421 10781490 5'utr sesB FlyBase G66417.1 AGCAATAGCAACAGCAAAGGCATAAGCTAAGTTTGATCTGCAACCAACACCTCTTACCACGAACAACGGC 77 10781458 0.970164408 7 70 427 0.920454545 1.431363764 0.125 0.116883117 0.227272727 77 5 2 81 X:10781421-10781490 6 sesB FBtr0073424|FBtr0346384|FBtr0073423|FBtr0073422|FBtr0073421 10780891|10780991|10780991|10780991|10780991 10781620|10781620|10781620|10781620|10781620 TGATCT 6mer3-8 dme-bantam-3p X - 10781425 10781479 5'utr sesB FlyBase G49996.1 CAGCAAAGGCATAAGCTAAGTTTGATCTGCAACCAACACCTCTTACCACGAACAA 21 10781457 0.910193931 6 21 118 1 1.602059991 0.025 0.476190476 0.725 21 0 0 40 X:10781425-10781479 6 46.5 5085 FBgn0003360 11391.58667 829.71 1277.313333 0.00408196 0.056043678 0.036404537 1 0 0.5 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA X 10789474 10789479 - X_10789474_10789479_- 0.999999999 0.999999999 0.999999999 0 Imp FBtr0073414 10787867 10797068 X - 10789415 10789520 3'utr Imp FlyBase G66428.1 TGTTAAGTTCATTTAATCTACACATAATCTACATGAGGATGATGTGACGACACCAGATGTATCTACACTGTACATTGTATCTACATTACAGAGCTAAAATATCTAT 77 10789463 0.856936689 20 70 509 0.917525773 1.949390007 0.144329897 0.181818182 0.350515464 77 8 0 89 X:10789415-10789520 6 Imp FBtr0073414 10787867 10797068 ATGTGA 6mer3-8 dme-miR-1003-3p X - 10789422 10789571 3'utr Imp FlyBase G50008.1 ATCTTTACCTAAATTAGTTTAGAGCTTTTTTTTGCGTCGTCTACATTTTACTGTTAAGTTCATTTAATCTACACATAATCTACATGAGGATGATGTGACGACACCAGATGTATCTACACTGTACATTGTATCTACATTACAGAGCTAAAA 55 10789463 0.971180952 19 54 324 0.989130435 1.658011397 0.184782609 0.472727273 0.684782609 55 0 1 91 X:10789422-10789571 6 40.5 5086 FBgn0262735 4183.533333 61.35 94.29666667 0.009680812 0.660146699 0.429495564 -16 -16 -16 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 10789827 10789833 - X_10789827_10789833_- 0.801970437 0.801970437 0.801970437 0 Imp FBtr0073414|FBtr0073414|FBtr0073414 10787867|10787867|10787867 10797068|10797068|10797068 X - 10789758 10789879 3'utr Imp FlyBase G66431.1 AATCAGACCTCCCCCCTTCTCACTTCTCCAGCGCCTGGTTTGCCTGTGTGATAGTAGTTTATAATTAAAACCATCCGCTGGGCACCCAACTCCCCTCATGGGACCTTAAGCAGTCCCCCCCC 295 10789835 0.989768634 24 281 2760 0.955621302 1.810232518 0.056213018 0.13220339 0.24260355 295 11 4 323 X:10789758-10789879 7 Imp FBtr0073414|FBtr0073414|FBtr0073414 10787867|10787867|10787867 10797068|10797068|10797068 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 10789773 10789878 3'utr Imp FlyBase G50009.1 ATCAGACCTCCCCCCTTCTCACTTCTCCAGCGCCTGGTTTGCCTGTGTGATAGTAGTTTATAATTAAAACCATCCGCTGGGCACCCAACTCCCCTCATGGGACCTT 211 10789835 0.840990894 17 195 2016 0.945619335 1.650446298 0.039274924 0.421800948 0.63141994 211 12 6 313 X:10789773-10789878 7 223.5 5087 FBgn0262735 4183.533333 61.35 94.29666667 0.053423741 3.643031785 2.370179222 2 2 2 0.01 dme-miR-307a-3p 6mer2-7 GTTGTG X 10789994 10789999 - X_10789994_10789999_- 0.999999885 0.999999999 0.999999942 7.07E-08 Imp FBtr0073414 10787867 10797068 X - 10789953 10790004 3'utr Imp FlyBase G66432.1 TTGTTGTTGTGTATATCATTTTGCCGCCCTCGTCAACCAACCAAACACTCCA 46 10789985 0.986318868 4 46 392 1 1.69019608 0.448979592 0.065217391 0.12244898 46 0 0 49 X:10789953-10790004 6 Imp FBtr0073414 10787867 10797068 GTTGTG 6mer2-7 dme-miR-307a-3p X - 10789949 10790005 3'utr Imp FlyBase G50010.1 TTTGTTGTTGTGTATATCATTTTGCCGCCCTCGTCAACCAACCAAACACTCCACTTC 29 10789985 0.986807238 7 29 246 1 1.62324929 0.404761905 0.310344828 0.523809524 29 0 0 42 X:10789949-10790005 6 30 5088 FBgn0262735 4183.533333 61.35 94.29666667 0.007170972 0.488997555 0.318144862 -14 -14 -14 0.01 dme-miR-283-5p 6mer3-8 TGATAT X 10790068 10790073 - X_10790068_10790073_- 0.999999999 0.999999999 0.999999999 0 Imp FBtr0073414 10787867 10797068 X - 10790044 10790196 3'utr Imp FlyBase G66433.1 CTATAAAAAAAATAAGCATGCATAACGCTATATAAATTATAAATCGATAAGCCTGGCGTTGCGTAGTCAGTTTATTGCATTTTATTTGGCATATTGAAAAATGATTTCCGTTTTATCTTCCGTTGATATCTTACTACCCATATGGGAATCAAT 39 10790074 0.930515854 19 38 332 0.978723404 1.662757832 0.063829787 0.153846154 0.29787234 39 1 0 46 X:10790044-10790196 6 Imp FBtr0073414 10787867 10797068 TGATAT 6mer3-8 dme-miR-283-5p X - 10790046 10790093 3'utr Imp FlyBase G50011.1 ATTTCCGTTTTATCTTCCGTTGATATCTTACTACCCATATGGGAATCA 9 10790078 0.87405786 6 9 92 1 1.113943352 0 0.333333333 0.538461538 9 0 0 13 X:10790046-10790093 6 11 5089 FBgn0262735 4183.533333 61.35 94.29666667 0.002629356 0.179299104 0.116653116 1 5 3 0.01 dme-miR-277-3p 7mer-m8 TGCATTT X 10790115 10790121 - X_10790115_10790121_- 0.620204266 0.620204266 0.620204266 0 Imp FBtr0073414 10787867 10797068 X - 10790044 10790196 3'utr Imp FlyBase G66433.1 CTATAAAAAAAATAAGCATGCATAACGCTATATAAATTATAAATCGATAAGCCTGGCGTTGCGTAGTCAGTTTATTGCATTTTATTTGGCATATTGAAAAATGATTTCCGTTTTATCTTCCGTTGATATCTTACTACCCATATGGGAATCAAT 39 10790122 0.930515854 19 38 332 0.978723404 1.662757832 0.063829787 0.153846154 0.29787234 39 1 0 46 X:10790044-10790196 7 Imp FBtr0073414 10787867 10797068 TGCATTT 7mer-m8 dme-miR-277-3p X - 10790106 10790159 3'utr Imp FlyBase G50012.1 TATAAATCGATAAGCCTGGCGTTGCGTAGTCAGTTTATTGCATTTTATTTGGCA 11 10790122 0.885268022 2 9 94 0.941176471 1.204119983 0.176470588 0.363636364 0.588235294 11 1 0 16 X:10790106-10790159 7 7 5090 FBgn0262735 4183.533333 61.35 94.29666667 0.001673227 0.11409943 0.074233801 1 1 1 0.01 dme-miR-184-5p 6mer2-7 GATAAG X 10790146 10790151 - X_10790146_10790151_- 0.999999998 0.999999999 0.999999999 0 Imp FBtr0073414 10787867 10797068 X - 10790044 10790196 3'utr Imp FlyBase G66433.1 CTATAAAAAAAATAAGCATGCATAACGCTATATAAATTATAAATCGATAAGCCTGGCGTTGCGTAGTCAGTTTATTGCATTTTATTTGGCATATTGAAAAATGATTTCCGTTTTATCTTCCGTTGATATCTTACTACCCATATGGGAATCAAT 39 10790122 0.930515854 19 38 332 0.978723404 1.662757832 0.063829787 0.153846154 0.29787234 39 1 0 46 X:10790044-10790196 6 Imp FBtr0073414 10787867 10797068 GATAAG 6mer2-7 dme-miR-184-5p X - 10790106 10790159 3'utr Imp FlyBase G50012.1 TATAAATCGATAAGCCTGGCGTTGCGTAGTCAGTTTATTGCATTTTATTTGGCA 11 10790122 0.885268022 2 9 94 0.941176471 1.204119983 0.176470588 0.363636364 0.588235294 11 1 0 16 X:10790106-10790159 6 6.5 5091 FBgn0262735 4183.533333 61.35 94.29666667 0.001553711 0.10594947 0.068931387 -29 -29 -29 0.01 dme-miR-14-3p 7mer-A1 AGACTGA X 10790375 10790381 - X_10790375_10790381_- 0.823349562 0.823349562 0.823349562 0 Imp FBtr0073414 10787867 10797068 X - 10790300 10790418 3'utr Imp FlyBase G66434.1 TTCGATTTGTAATAGATTATATACGGTAATCAACTGGAGACTGAGCTACAACATATATTTAGTTACCGTTATATTTATTGCAGAGACACACACACATACATACACTAACACCAACCCCA 745 10790385 0.972319165 25 680 3989 0.913142857 1.94830427 0.138285714 0.139597315 0.267428571 745 68 8 799 X:10790300-10790418 7 Imp FBtr0073414 10787867 10797068 AGACTGA 7mer-A1 dme-miR-14-3p X - 10790333 10790415 3'utr Imp FlyBase G50014.1 GATTTGTAATAGATTATATACGGTAATCAACTGGAGACTGAGCTACAACATATATTTAGTTACCGTTATATTTATTGCAGAGA 546 10790385 0.718578684 21 493 2844 0.923255814 1.945577993 0.197674419 0.41025641 0.625581395 546 58 8 794 X:10790333-10790415 7 555.5 5092 FBgn0262735 4183.533333 61.35 94.29666667 0.132782496 9.054604727 5.890982361 4 4 4 0.01 dme-miR-277-3p 6mer3-8 TGCATT X 10790655 10790660 - X_10790655_10790660_- 0.999999999 0.999999999 0.999999999 0 Imp FBtr0073414 10787867 10797068 X - 10790635 10790691 3'utr Imp FlyBase G66436.1 AATGCATTAAAATGTTGTATGATGTAGACTATGCATTGGAACGAAACGAAACGAAAC 38 10790667 0.98417967 5 37 292 1 1.672097858 0.425531915 0.189189189 0.361702128 37 0 0 47 X:10790635-10790691 6 Imp FBtr0073414 10787867 10797068 TGCATT 6mer3-8 dme-miR-277-3p X - 10790643 10790728 3'utr Imp FlyBase G50016.1 ATATTGTATATGTACAATAGCAACAACGCAACATCAAAATGCATTAAAATGTTGTATGATGTAGACTATGCATTGGAACGAAACGA 20 10790667 0.980208271 6 20 141 1 1.462397998 0.137931034 0.45 0.620689655 20 0 0 29 X:10790643-10790728 6 26.5 5093 FBgn0262735 4183.533333 61.35 94.29666667 0.006334359 0.43194784 0.281027961 7 7 7 0.01 dme-miR-184-5p 6mer2-7 GATAAG X 10790847 10790852 - X_10790847_10790852_- 1 1 1 0 Imp FBtr0073416|FBtr0073414 10790803|10787867 10797068|10797068 X - 10790827 10790870 3'utr Imp FlyBase G66437.1 GAAACCCAAAAAAAAAGCGATAAGCATGAACTAAAAACACCCAA 11 10790850 0.949449359 2 11 22 1 1.113943352 0.076923077 0.181818182 0.307692308 11 0 0 13 X:10790827-10790870 6 Imp FBtr0073416|FBtr0073414 10790803|10787867 10797068|10797068 GATAAG 6mer2-7 dme-miR-184-5p X - 10790825 10790859 3'utr Imp FlyBase G50017.1 AAAAAGCGATAAGCATGAACTAAAAACACCCAACA 6 10790849 0.7976646 2 6 12 1 0.903089987 0 0.333333333 0.5 6 0 0 8 X:10790825-10790859 6 8.5 5094 FBgn0262735 4183.533333 61.35 94.29666667 0.002031775 0.138549307 0.090141044 -2 -3 -2.5 0.01 dme-miR-282-5p 8mer-A1 AGAGGCTA X 10793075 10793082 - X_10793075_10793082_- 0.63790686 0.63790686 0.63790686 0 Imp FBtr0073418|FBtr0073416|FBtr0073414 10792506|10790803|10787867 10797068|10797068|10797068 X - 10793016 10793165 3'utr Imp FlyBase G66440.1 AGAGAACTCAGTTTGAAGAACGAAGAAAGAAAAGCGATTGTGAGTTGTGTGAAAAGCAGAAACGAAATTATTTTTTAGTATTTAGAGGCTATTTTATATCGTTATTAAAGCAGGTAGGCAAGTGAGGCAACGGTTAGGAAAAAAAGGAAG 235 10793083 0.984308871 24 222 1734 0.949090909 2.416640507 0.141818182 0.157446809 0.28 235 14 0 261 X:10793016-10793165 8 Imp FBtr0073416|FBtr0073414|FBtr0073418 10790803|10787867|10792506 10797068|10797068|10797068 AGAGGCTA 8mer-A1 dme-miR-282-5p X - 10793013 10793184 3'utr Imp FlyBase G50021.1 TAATGATAATGATGTAGAAAGAGAACTCAGTTTGAAGAACGAAGAAAGAAAAGCGATTGTGAGTTGTGTGAAAAGCAGAAACGAAATTATTTTTTAGTATTTAGAGGCTATTTTATATCGTTATTAAAGCAGGTAGGCAAGTGAGGCAACGGTTAGGAAAAAAAGGAAGTGA 196 10793083 0.987128278 29 181 1389 0.928082192 1.955848036 0.157534247 0.336734694 0.554794521 196 19 2 271 X:10793013-10793184 8 82.5 5095 FBgn0262735 4183.533333 61.35 94.29666667 0.019720173 1.344743276 0.87489837 1 1 1 0.01 dme-miR-1003-3p 6mer2-7 TGTGAG X 10793222 10793227 - X_10793222_10793227_- 1 1 1 0 Imp FBtr0073418|FBtr0073416|FBtr0073414 10792506|10790803|10787867 10797068|10797068|10797068 X - 10793198 10793266 3'utr Imp FlyBase G66441.1 ATAAATGAGGATAAAGATCGAGGTAACAACTAAAAAACTTGTGAGTTAGCGTGCGCGTTAAAAACGAAA 14 10793221 0.973597046 5 14 80 1 1.146128036 0.071428571 0 0 14 0 0 14 X:10793198-10793266 6 Imp FBtr0073416|FBtr0073414|FBtr0073418 10790803|10787867|10792506 10797068|10797068|10797068 TGTGAG 6mer2-7 dme-miR-1003-3p X - 10793203 10793260 3'utr Imp FlyBase G50022.1 GAGGATAAAGATCGAGGTAACAACTAAAAAACTTGTGAGTTAGCGTGCGCGTTAAAAA 14 10793221 0.969164241 4 14 73 1 1.380211242 0.208333333 0.357142857 0.625 14 0 0 24 X:10793203-10793260 6 12 5096 FBgn0262735 4183.533333 61.35 94.29666667 0.002868389 0.195599022 0.127257945 -6 -6 -6 0.01 dme-bantam-3p 6mer3-8 TGATCT X 10793754 10793759 - X_10793754_10793759_- 1 1 1 0 Imp FBtr0073418|FBtr0073416|FBtr0073414 10792506|10790803|10787867 10797068|10797068|10797068 X - 10793746 10793784 3'utr Imp FlyBase G66442.1 AAGAATGTTGCTGGGCATTTACCATTGATCTTTATATAC 10 10793760 0.612909663 4 7 108 0.75 0.954242509 0.25 0.2 0.333333333 10 3 0 9 X:10793746-10793784 6 Imp FBtr0073416|FBtr0073414|FBtr0073418 10790803|10787867|10792506 10797068|10797068|10797068 TGATCT 6mer3-8 dme-bantam-3p X - 10793740 10793781 3'utr Imp FlyBase G50024.1 AATGTTGCTGGGCATTTACCATTGATCTTTATATACGAGTAT 7 10793760 0.751734379 4 7 78 1 0.954242509 0.222222222 0.285714286 0.444444444 7 0 0 9 X:10793740-10793781 6 8 5097 FBgn0262735 4183.533333 61.35 94.29666667 0.001912259 0.130399348 0.08483863 1 1 1 0.01 dme-miR-278-3p 6mer3-8 CCCACC X 10793889 10793894 - X_10793889_10793894_- 1 1 1 0 Imp FBtr0073418|FBtr0073416|FBtr0073414 10792506|10790803|10787867 10797068|10797068|10797068 X - 10793786 10793897 3'utr Imp FlyBase G66442.2 CTCCCCACCCAGACCATATGTACCATACCAACTGAAGCAGATCAACCAAGAACTGAGGGATATAGGAGATATAGGAGCCAGGAAGTGATTAGGATGGGATGGGAGGTGTATA 22 10793872 0.874663454 9 19 78 0.869565217 1.301029996 0.086956522 0.045454545 0.086956522 22 3 0 20 X:10793786-10793897 6 Imp FBtr0073416|FBtr0073414|FBtr0073418 10790803|10787867|10792506 10797068|10797068|10797068 CCCACC 6mer3-8 dme-miR-278-3p X - 10793824 10793915 3'utr Imp FlyBase G50025.1 TTTTGGGTCGAACTCGAACTCCCCACCCAGACCATATGTACCATACCAACTGAAGCAGATCAACCAAGAACTGAGGGATATAGGAGATATAG 11 10793877 0.675730331 10 11 43 1 1.146128036 0 0.272727273 0.428571429 11 0 0 14 X:10793824-10793915 6 3.5 5098 FBgn0262735 4183.533333 61.35 94.29666667 0.000836613 0.057049715 0.037116901 -22 -17 -19.5 0.01 dme-miR-304-5p 7mer-m8 TGAGATT X 10796118 10796124 - X_10796118_10796124_- 0.620203442 0.620203442 0.620203442 0 Imp FBtr0073418|FBtr0305150|FBtr0346315|FBtr0073415|FBtr0073416|FBtr0073414|FBtr0073413|FBtr0301409|FBtr0305149|FBtr0073420|FBtr0073417 10792506|10795995|10795995|10794336|10790803|10787867|10795435|10795995|10795995|10795995|10795995 10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068 X - 10796102 10796197 3'utr Imp FlyBase G66447.2 TTTTTAACAAAGATTTAGTAAGCTTACATTTAAGTGGAATGAATAGAAGAGAAGTGAGCAAAGCGTAAGAGAATGAGATTGAGAATCAATTTAAAA 182 10796124 0.926608973 8 178 652 0.981308411 1.84509804 0.191588785 0.148351648 0.275700935 182 2 2 210 X:10796102-10796197 7 Imp FBtr0301409|FBtr0073420|FBtr0073416|FBtr0305149|FBtr0073417|FBtr0073414|FBtr0073413|FBtr0346315|FBtr0073415|FBtr0073418|FBtr0305150 10795995|10795995|10790803|10795995|10795995|10787867|10795435|10795995|10794336|10792506|10795995 10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068 TGAGATT 7mer-m8 dme-miR-304-5p X - 10796111 10796166 3'utr Imp FlyBase G50028.1 AAGTGGAATGAATAGAAGAGAAGTGAGCAAAGCGTAAGAGAATGAGATTGAGAATC 110 10796124 0.925280572 3 109 380 0.994117647 2.227886705 0.2 0.354545455 0.582352941 110 1 0 169 X:10796111-10796166 7 140.5 5099 FBgn0262735 4183.533333 61.35 94.29666667 0.033584052 2.290138549 1.489978437 0 0 0 0.01 dme-miR-1007-3p 6mer3-8 TGAGCT X 10796708 10796713 - X_10796708_10796713_- 0.999999998 1 0.999999999 0 Imp FBtr0073418|FBtr0305150|FBtr0346315|FBtr0073415|FBtr0073416|FBtr0073419|FBtr0073414|FBtr0073413|FBtr0301409|FBtr0305149|FBtr0073420|FBtr0073417 10792506|10795995|10795995|10794336|10790803|10796211|10787867|10795435|10795995|10795995|10795995|10795995 10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068 X - 10796710 10796767 3'utr Imp FlyBase G66450.1 CATAAGCAAAATTTTACGCATATAGAACTGTAGGGGAACCACCACATCAAAAAGTGAG 11 10796739 0.930532633 7 9 44 0.833333333 1 0.083333333 0.090909091 0.166666667 11 2 0 10 X:10796710-10796767 3 Imp FBtr0301409|FBtr0073420|FBtr0073416|FBtr0305149|FBtr0073419|FBtr0073417|FBtr0073414|FBtr0073413|FBtr0346315|FBtr0073415|FBtr0073418|FBtr0305150 10795995|10795995|10790803|10795995|10796211|10795995|10787867|10795435|10795995|10794336|10792506|10795995 10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068 TGAGCT 6mer3-8 dme-miR-1007-3p X - 10796685 10796764 3'utr Imp FlyBase G50032.1 AAGCAAAATTTTACGCATATAGAACTGTAGGGGAACCACCACATCAAAAAGTGAGCTGCGTGAAGAGCTCTACTAGTTCA 10 10796721 0.862987187 6 9 27 1 1.176091259 0.133333333 0.4 0.6 10 0 0 15 X:10796685-10796764 6 1.5 5100 FBgn0262735 4183.533333 61.35 94.29666667 0.000358549 0.024449878 0.015907243 26 8 17 0.01 dme-miR-999-3p 6mer3-8 AGTTAA X 10833187 10833192 - X_10833187_10833192_- 1 1 1 0 sbr FBtr0073411 10832750 10833508 X - 10833181 10833229 3'utr sbr FlyBase G66467.1 GAGGCCAGGACGAGTCTGCGAACGGTAGTCCCTTTAGAGTTAAAGTTGT 26 10833197 0.981945445 5 18 158 0.666666667 1 0.433333333 0.115384615 0.233333333 26 9 1 20 X:10833181-10833229 6 sbr FBtr0073411 10832750 10833508 AGTTAA 6mer3-8 dme-miR-999-3p X - 10833156 10833229 3'utr sbr FlyBase G50044.1 GAGGCCAGGACGAGTCTGCGAACGGTAGTCCCTTTAGAGTTAAAGTTGTTTTAGATTCCTAAGCCAAACACCTT 27 10833197 0.981742567 5 24 184 0.948717949 1.568201724 0.307692308 0.37037037 0.564102564 27 2 0 37 X:10833156-10833229 6 12.5 5101 FBgn0003321 977.3433333 36.05 55.19 0.012789774 0.346740638 0.226490306 5 5 5 0.01 dme-miR-307a-3p 6mer2-7 GTTGTG X 10833355 10833360 - X_10833355_10833360_- 1 1 1 0 sbr FBtr0073411 10832750 10833508 X - 10833333 10833377 3'utr sbr FlyBase G66469.1 TATTATTAAGCTGCGAAGTTGTGTGCACATTCGGGCAGTAGCAAT 21 10833356 0.745220811 2 20 129 1 1.431363764 0.111111111 0.238095238 0.407407407 21 0 0 27 X:10833333-10833377 6 sbr FBtr0073411 10832750 10833508 GTTGTG 6mer2-7 dme-miR-307a-3p X - 10833336 10833380 3'utr sbr FlyBase G50046.1 TAATATTATTAAGCTGCGAAGTTGTGTGCACATTCGGGCAGTAGC 18 10833356 0.71027996 2 18 107 1 1.414973348 0.269230769 0.333333333 0.538461538 18 0 0 26 X:10833336-10833380 6 19 5102 FBgn0003321 977.3433333 36.05 55.19 0.019440456 0.52704577 0.344265265 -4 -4 -4 0.01 dme-miR-79-3p 8mer-A1 TAGCTTTA X 10862879 10862886 + X_10862879_10862886_+ 0.625364009 0.625364009 0.625364009 0 CG2186 FBtr0073381|FBtr0332961 10862782|10862782 10863580|10866246 X + 10862817 10862980 3'utr CG2186 FlyBase G60340.1 TATAACTATTATCGATTATAGATGTACGACGATGATGGGGAGTAGTGCAGTAAGCAGTACTTTAGCTTTAAGGTAAAAAGTTATAAATAGTTGAGCTTTCTTTATAAATAGCGGATTATACATATATCTAGATGTCATGTAATTGGTGGGTGTGCGTGAGGGTC 22 10862878 0.98390638 12 21 179 0.966666667 1.161368002 0.1 0.272727273 0.466666667 22 0 1 29 X:10862817-10862980 8 CG2186 FBtr0073381|FBtr0332961 10862782|10862782 10863580|10866246 TAGCTTTA 8mer-A1 dme-miR-79-3p X + 10862810 10862944 3'utr CG2186 FlyBase G45607.1 AGTTTTCTATAACTATTATCGATTATAGATGTACGACGATGATGGGGAGTAGTGCAGTAAGCAGTACTTTAGCTTTAAGGTAAAAAGTTATAAATAGTTGAGCTTTCTTTATAAATAGCGGATTATACATATATC 27 10862878 0.993591984 11 26 200 1 1.643452676 0.386363636 0.481481481 0.681818182 27 0 0 44 X:10862810-10862944 8 10 5103 FBgn0030243 1064.863333 20.89333333 32.09 0.009390876 0.47862157 0.311623559 1 1 1 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC X 10863491 10863497 + X_10863491_10863497_+ 0.661615645 0.661615645 0.661615645 0 CG2186 FBtr0073381|FBtr0332961 10862782|10862782 10863580|10866246 X + 10863438 10863545 3'utr CG2186 FlyBase G60345.1 ATTTTATACATTGTGCCCCGTTGATTGTAAATGAAATTTATTGTCTGTCCTGTTGTGTTCTTTGTAACTACTATAAACCACATACGAAACTATGTTAGCTTGTGAACT 88 10863490 0.790500796 16 87 1048 0.99047619 2.017033339 0.295238095 0.113636364 0.257142857 88 1 0 104 X:10863438-10863545 7 CG2186 FBtr0073381|FBtr0332961 10862782|10862782 10863580|10866246 TGTGTTC 7mer-m8 dme-miR-317-3p X + 10863443 10863512 3'utr CG2186 FlyBase G45611.1 ATACATTGTGCCCCGTTGATTGTAAATGAAATTTATTGTCTGTCCTGTTGTGTTCTTTGTAACTACTATA 49 10863490 0.992978706 6 49 582 1 1.838849091 0.231884058 0.285714286 0.492753623 49 0 0 69 X:10863443-10863512 7 61 5104 FBgn0030243 1064.863333 20.89333333 32.09 0.057284346 2.919591576 1.900903708 1 1 1 0.01 dme-miR-304-5p 6mer2-7 GAGATT X 10864011 10864016 + X_10864011_10864016_+ 1 1 1 0 CG2186 FBtr0332961 10862782 10866246 X + 10863981 10864040 3'utr CG2186 FlyBase G60349.1 TCGAAGATAATGCGAAATGCCTAGACTAAAGAGATTGTTAAATTATTGCCACTCCCGCTC 7 10864017 0.986355677 5 5 40 0.75 0.77815125 0.25 0.142857143 0.25 7 2 0 6 X:10863981-10864040 6 CG2186 FBtr0332961 10862782 10866246 GAGATT 6mer2-7 dme-miR-304-5p X + 10863978 10864037 3'utr CG2186 FlyBase G45613.1 GCGTCGAAGATAATGCGAAATGCCTAGACTAAAGAGATTGTTAAATTATTGCCACTCCCG 8 10864017 0.971664377 4 6 41 0.933333333 1.146128036 0.466666667 0.625 0.8 8 1 0 14 X:10863978-10864037 6 5.5 5105 FBgn0030243 1064.863333 20.89333333 32.09 0.005164982 0.263241863 0.171392957 -6 -6 -6 0.01 dme-miR-79-3p 7mer-m8 TAGCTTT X 10864685 10864691 + X_10864685_10864691_+ 0.620204031 0.620204031 0.620204031 0 CG2186 FBtr0332961 10862782 10866246 X + 10864577 10864735 3'utr CG2186 FlyBase G60353.1 AATATGATATAATATATGGATTAATAAAAACCAATTATACCACGTGCACACATAAAAGCGTGCGGCAGCATAACTGTATAAACATCTAAAAATTATTCCAAGTGATTTTAGCTTTTTAAGAACCAAGTCGAAACAAACTGAACACTCGTAGTGGAAAAC 56 10864683 0.989285765 14 56 530 1 1.819543936 0.151515152 0.160714286 0.287878788 56 0 0 66 X:10864577-10864735 7 CG2186 FBtr0332961 10862782 10866246 TAGCTTT 7mer-m8 dme-miR-79-3p X + 10864661 10864735 3'utr CG2186 FlyBase G45616.1 TCTAAAAATTATTCCAAGTGATTTTAGCTTTTTAAGAACCAAGTCGAAACAAACTGAACACTCGTAGTGGAAAAC 37 10864683 0.99987835 6 35 353 0.944444444 1.707570176 0.12962963 0.378378378 0.574074074 37 3 0 51 X:10864661-10864735 7 38 5106 FBgn0030243 1064.863333 20.89333333 32.09 0.035685331 1.818761966 1.184169523 2 2 2 0.01 dme-miR-308-3p 8mer-m1 CTGTGATT X 10864799 10864806 + X_10864799_10864806_+ 0.385560641 0.385560641 0.385560641 0 CG2186 FBtr0332961 10862782 10866246 X + 10864760 10864823 3'utr CG2186 FlyBase G60354.1 AAACAAAAATTGAAATGATTCCAATTTGCAAATCCGAGTCTGTGATTATTTTTATATTATTCTT 44 10864798 0.988869372 12 44 416 1 1.763427994 0 0.25 0.431034483 44 0 0 58 X:10864760-10864823 8 CG2186 FBtr0332961 10862782 10866246 CTGTGATT 8mer-m1 dme-miR-308-3p X + 10864776 10864815 3'utr CG2186 FlyBase G45617.1 GATTCCAATTTGCAAATCCGAGTCTGTGATTATTTTTATA 32 10864798 0.75912235 10 29 304 0.872340426 1.311753861 0 0.28125 0.510638298 32 5 1 41 X:10864776-10864815 8 36 5107 FBgn0030243 1064.863333 20.89333333 32.09 0.033807155 1.723037652 1.121844811 1 1 1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 10865093 10865099 + X_10865093_10865099_+ 0.801970437 0.801970437 0.801970437 0 CG2186 FBtr0332961|FBtr0332961|FBtr0332961 10862782|10862782|10862782 10866246|10866246|10866246 X + 10865055 10865119 3'utr CG2186 FlyBase G60355.1 TCAAATAGATTAGATTACTTGGGGATTCGTCATTTATGTGTGATATACCATATATATGTATAGTT 36 10865091 0.989506363 6 29 394 0.80952381 1.531478917 0.047619048 0.138888889 0.261904762 36 8 0 34 X:10865055-10865119 7 CG2186 FBtr0332961|FBtr0332961|FBtr0332961 10862782|10862782|10862782 10866246|10866246|10866246 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X + 10865016 10865113 3'utr CG2186 FlyBase G45618.1 AAATCGGTTTGCGATCAGGCTCCAACGCTCCATTCTCAGTCAAATAGATTAGATTACTTGGGGATTCGTCATTTATGTGTGATATACCATATATATGT 22 10865090 0.989701717 7 21 206 0.96969697 1.505149978 0.03030303 0.272727273 0.515151515 22 1 0 32 X:10865016-10865113 7 26.5 5108 FBgn0030243 1064.863333 20.89333333 32.09 0.024885823 1.26834716 0.825802431 2 3 2.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 10865385 10865390 + X_10865385_10865390_+ 1 1 1 0 CG2186 FBtr0332961 10862782 10866246 X + 10865295 10865412 3'utr CG2186 FlyBase G60356.1 ATCGCCAATACATTTTACCTGTGTATAGTGTATAGTTAAGAACCGACTAGCAGAAATGCAAACACTATTCGATGTTAGTTATCTATATATGTACCTAGAAAGTTACTCTCTATGTGTG 54 10865384 0.946230999 11 49 461 0.921875 1.293730757 0.15625 0.185185185 0.3125 54 3 2 59 X:10865295-10865412 6 CG2186 FBtr0332961 10862782 10866246 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X + 10865361 10865403 3'utr CG2186 FlyBase G45621.1 ATTCGATGTTAGTTATCTATATATGTACCTAGAAAGTTACTCT 25 10865384 0.790406837 4 25 229 1 1.579783597 0.210526316 0.44 0.631578947 25 0 0 38 X:10865361-10865403 6 28 5109 FBgn0030243 1064.863333 20.89333333 32.09 0.026294454 1.340140396 0.872545964 1 1 1 0.01 dme-miR-252-5p 6mer3-8 GTACTT X 10874076 10874081 - X_10874076_10874081_- 1 0.999861371 0.999930686 9.80E-05 CG1637 FBtr0339836|FBtr0073406 10873898|10873898 10874473|10874473 X - 10874057 10874094 3'utr CG1637 FlyBase G66509.1 ATGTGTATGGGATGTACTTGATATACTTATTAGGATCA 18 10874082 0.839540507 4 17 167 0.958333333 1.361727836 0.291666667 0.222222222 0.416666667 18 1 0 23 X:10874057-10874094 6 CG1637 FBtr0339836|FBtr0073406 10873898|10873898 10874473|10874473 GTACTT 6mer3-8 dme-miR-252-5p X - 10874058 10874091 3'utr CG1637 FlyBase G50078.1 TGTATGGGATGTACTTGATATACTTATTAGGATC 8 10874082 0.815908866 4 8 79 1 1.041392685 0.181818182 0.375 0.545454545 8 0 0 11 X:10874058-10874091 6 13 5110 FBgn0030245 450.3333333 29.93666667 45.6 0.028867506 0.434250084 0.285087719 1 1 1 0.01 dme-miR-986-5p 6mer3-8 ATTCGA X 10874345 10874350 - X_10874345_10874350_- 1 1 1 0 CG1637 FBtr0339836|FBtr0073406 10873898|10873898 10874473|10874473 X - 10874307 10874461 3'utr CG1637 FlyBase G66510.1 AATCTGAACCATAACCTGAGCCGAATCAATTCAAGCTAAAGGAGTCTCTCGAGGCATTACACGCATCAATAGCAACAGGCAGTATTAGTAGCGCACATTCGCCTCGACCTGATTCGATCACAAACTATAGCAATAAGCGTGGCACATTCCTTATC 53 10874358 0.981498181 12 50 262 0.93442623 1.755874856 0.131147541 0.150943396 0.262295082 53 4 0 57 X:10874307-10874461 6 CG1637 FBtr0339836|FBtr0073406 10873898|10873898 10874473|10874473 ATTCGA 6mer3-8 dme-miR-986-5p X - 10874318 10874400 3'utr CG1637 FlyBase G50079.1 CGCATCAATAGCAACAGGCAGTATTAGTAGCGCACATTCGCCTCGACCTGATTCGATCACAAACTATAGCAATAAGCGTGGCA 22 10874349 0.959209384 7 22 107 1 1.447158031 0.142857143 0.227272727 0.392857143 22 0 0 28 X:10874318-10874400 6 16.5 5111 FBgn0030245 450.3333333 29.93666667 45.6 0.036639526 0.551163568 0.361842105 8 -1 3.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 11094392 11094399 + X_11094392_11094399_+ 0.63113665 0.63113665 0.63113665 0 CG2061 FBtr0073429|FBtr0332383|FBtr0073431 11094303|11094303|11094303 11094660|11094947|11094660 X + 11094366 11094448 3'utr CG2061 FlyBase G60372.1 TCGAATCAGGGAGAGTTATCATCATTTCTAGTCACTTGTTTGCCGATTTTTCTCTCATTGTTGCCTTTGCGTTCACCCAGCGA 209 11094391 0.794624299 12 200 2075 0.958174905 1.799340549 0.406844106 0.220095694 0.380228137 209 8 3 252 X:11094366-11094448 8 CG2061 FBtr0073431|FBtr0073429|FBtr0332383 11094303|11094303|11094303 11094660|11094660|11094947 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X + 11094366 11094414 3'utr CG2061 FlyBase G45629.1 TCGAATCAGGGAGAGTTATCATCATTTCTAGTCACTTGTTTGCCGATTT 126 11094391 0.961042815 6 123 1220 0.97740113 2.238046103 0.463276836 0.349206349 0.536723164 126 4 0 173 X:11094366-11094414 8 164 5112 FBgn0027498 98.96 5.68 8.753333333 1.657235247 28.87323944 18.73571973 1 1 1 0.01 dme-bantam-3p 6mer2-7 GATCTC X 11094526 11094531 + X_11094526_11094531_+ 1 1 1 0 CG2061 FBtr0073429|FBtr0332383|FBtr0073431 11094303|11094303|11094303 11094660|11094947|11094660 X + 11094500 11094614 3'utr CG2061 FlyBase G60373.2 CCCAGGTCCCGATGGAGCCCGTATCCGATCTCTGAGCGCACCGCTTGCTGGAATGTTCTCAGTCATTCTCATATCAAAATTCTCTGTGCTTTACGCTAAGCAATTAACTTAATAC 78 11094532 0.972476441 13 74 446 0.965909091 1.929418926 0.25 0.115384615 0.215909091 78 3 0 85 X:11094500-11094614 6 CG2061 FBtr0073431|FBtr0073429|FBtr0332383 11094303|11094303|11094303 11094660|11094660|11094947 GATCTC 6mer2-7 dme-bantam-3p X + 11094495 11094600 3'utr CG2061 FlyBase G45630.1 TAGATCCCAGGTCCCGATGGAGCCCGTATCCGATCTCTGAGCGCACCGCTTGCTGGAATGTTCTCAGTCATTCTCATATCAAAATTCTCTGTGCTTTACGCTAAGC 68 11094532 0.895780851 9 64 357 0.96 1.982271233 0.49 0.308823529 0.53 68 4 0 96 X:11094495-11094600 6 55.5 5113 FBgn0027498 98.96 5.68 8.753333333 0.56083266 9.771126761 6.340441736 -6 -6 -6 0.01 dme-miR-2a-2-5p 8mer-A1 TGATGAGA X 11111872 11111879 + X_11111872_11111879_+ 0.601217767 0.601217767 0.601217767 0 Hsp60 FBtr0073434|FBtr0073435 11111824|11111824 11112308|11112308 X + 11111831 11111914 3'utr Hsp60 FlyBase G60388.1 TGCCACTGACTGGTCGACAGCCGGAGAGGGGGAGGGAGATGTGATGAGAACCGAAACCAGCATACTGTTTAAGTCACGATGTGG 64 11111875 0.887892394 7 60 171 0.941176471 1.329058719 0.25 0.0625 0.117647059 64 2 2 64 X:11111831-11111914 8 Hsp60 FBtr0073435|FBtr0073434 11111824|11111824 11112308|11112308 TGATGAGA 8mer-A1 dme-miR-2a-2-5p X + 11111831 11111915 3'utr Hsp60 FlyBase G45641.1 TGCCACTGACTGGTCGACAGCCGGAGAGGGGGAGGGAGATGTGATGAGAACCGAAACCAGCATACTGTTTAAGTCACGATGTGGA 50 11111874 0.889051715 7 49 142 0.985915493 1.84509804 0.281690141 0.26 0.478873239 50 1 0 70 X:11111831-11111915 8 45 5114 FBgn0015245 2987.88 154.9833333 236.8566667 0.015060846 0.290353801 0.189988319 -3 -2 -2.5 0.01 dme-miR-278-3p 6mer3-8 CCCACC X 11111985 11111990 + X_11111985_11111990_+ 1 1 1 0 Hsp60 FBtr0073434|FBtr0073435 11111824|11111824 11112308|11112308 X + 11111955 11112066 3'utr Hsp60 FlyBase G60389.1 AGTTATCAGTCATCAGCAGTCGGAGCGAGACCCACCAATATCTCTTACATCGGTGCATCCAGCCGGAGACACATCACCCACCATTTGACACGCATTCTAATCCTTGATGGAA 105 11111999 0.840797799 12 97 501 0.927419355 2.06069784 0.185483871 0.161904762 0.290322581 105 9 0 115 X:11111955-11112066 6 Hsp60 FBtr0073435|FBtr0073434 11111824|11111824 11112308|11112308 CCCACC 6mer3-8 dme-miR-278-3p X + 11111955 11112115 3'utr Hsp60 FlyBase G45642.1 AGTTATCAGTCATCAGCAGTCGGAGCGAGACCCACCAATATCTCTTACATCGGTGCATCCAGCCGGAGACACATCACCCACCATTTGACACGCATTCTAATCCTTGATGGAACTTTGTTTTGCTTCGCATTTATCCTTTGGCAAGAGCAGCGCAACATCAG 108 11111999 0.975102335 16 102 636 0.948717949 2.170261715 0.173076923 0.324074074 0.532051282 108 8 0 148 X:11111955-11112115 6 61 5115 FBgn0015245 2987.88 154.9833333 236.8566667 0.020415813 0.393590709 0.257539722 -14 -14 -14 0.01 dme-miR-263a-5p 7mer-m1 TGCCATT X 11112690 11112696 - X_11112690_11112696_- 0.765573683 0.765586651 0.765580167 9.19E-06 CG11122 FBtr0073481 11112393 11112850 X - 11112653 11112722 3'utr CG11122 FlyBase G66526.1 ATCGCCGCCATCGATCACATACGTACTGCCATTGTGTCATCGTTAATCGTTAACGCCGGCGCCAGGAGGG 29 11112691 0.980362346 6 28 198 0.974358974 1.278753601 0.076923077 0.172413793 0.384615385 29 0 1 38 X:11112653-11112722 7 CG11122 FBtr0073481 11112393 11112850 TGCCATT 7mer-m1 dme-miR-263a-5p X - 11112643 11112720 3'utr CG11122 FlyBase G50089.1 CGCCGCCATCGATCACATACGTACTGCCATTGTGTCATCGTTAATCGTTAACGCCGGCGCCAGGAGGGGATCAGGATC 14 11112691 0.97753838 4 14 95 1 1.477121255 0.2 0.714285714 0.866666667 14 0 0 30 X:11112643-11112720 7 20 5116 FBgn0030266 709.6566667 7.043333333 10.83 0.028182642 2.8395646 1.846722068 -5 -5 -5 0.01 dme-miR-277-3p 7mer-m8 TGCATTT X 11129983 11129989 - X_11129983_11129989_- 0.620204266 0.620204266 0.620204266 0 Klp10A FBtr0346270|FBtr0073479|FBtr0073477|FBtr0073478 11129360|11129360|11129360|11129360 11130979|11130979|11130979|11130979 X - 11129964 11130006 3'utr Klp10A FlyBase G66557.1 ATGATTTAGAGATGATTTGCATTTCATTTTGTACTAATATTTA 8 11129990 0.990776445 3 7 78 1 1 0.1 0.25 0.4 8 0 0 10 X:11129964-11130006 7 Klp10A FBtr0073478|FBtr0073477|FBtr0346270|FBtr0073479 11129360|11129360|11129360|11129360 11130979|11130979|11130979|11130979 TGCATTT 7mer-m8 dme-miR-277-3p X - 11129955 11130011 3'utr Klp10A FlyBase G50110.1 TTATTATGATTTAGAGATGATTTGCATTTCATTTTGTACTAATATTTATTGCATATA 6 11129990 0.990042897 3 6 63 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 X:11129955-11130011 7 5.5 5117 FBgn0030268 2688.253333 72.09666667 110.64 0.002045938 0.076286467 0.049710774 1 1 1 0.01 dme-miR-2535b-3p 6mer3-8 CCGTGA X 11130598 11130603 - X_11130598_11130603_- 0.999986145 0.999999999 0.999993072 9.83E-06 Klp10A FBtr0346270|FBtr0073479|FBtr0073477|FBtr0073476|FBtr0073478|FBtr0073475 11129360|11129360|11129360|11130494|11129360|11130236 11130979|11130979|11130979|11130979|11130979|11130979 X - 11130598 11130669 3'utr Klp10A FlyBase G66561.1 AAAAAGGAACTCAACTGAAAACTGAAGACAGGCTAGGCTGGCTGGCCACGACTTTGTTTGGATTCGCCGTGA 43 11130615 0.920622785 7 42 217 0.98 1.69019608 0.06 0.11627907 0.24 43 1 0 49 X:11130598-11130669 5 Klp10A FBtr0073478|FBtr0073475|FBtr0073477|FBtr0073476|FBtr0346270|FBtr0073479 11129360|11130236|11129360|11130494|11129360|11129360 11130979|11130979|11130979|11130979|11130979|11130979 CCGTGA 6mer3-8 dme-miR-2535b-3p X - 11130587 11130665 3'utr Klp10A FlyBase G50115.1 AGGAACTCAACTGAAAACTGAAGACAGGCTAGGCTGGCTGGCCACGACTTTGTTTGGATTCGCCGTGAACTATGATTAT 34 11130615 0.96656399 9 33 181 1 1.681241237 0.208333333 0.264705882 0.479166667 34 0 0 48 X:11130587-11130665 6 4 5118 FBgn0030268 2688.253333 72.09666667 110.64 0.001487955 0.055481067 0.03615329 12 12 12 0.01 dme-miR-999-3p 6mer3-8 AGTTAA X 11139131 11139136 + X_11139131_11139136_+ 1 1 1 0 CG18292 FBtr0073437|FBtr0330387 11138901|11138943 11139689|11139689 X + 11139080 11139238 3'utr CG18292 FlyBase G60401.1 ACTAACTTGTAAGCCCACATCAACTTAATGGCCCTCGGGCCGCCGGACCATAGTTAAAGAATGTTTAGACTAGCTCAGGTTACAATCGGTTAAATCGACAATGCTACAAGTATAGCTGCAGCCCAAGTTATTGGACTTGTGTATCTCTACCGTATACCC 46 11139144 0.975145773 15 45 284 0.980392157 1.698970004 0.156862745 0.086956522 0.176470588 46 1 0 50 X:11139080-11139238 6 CG18292 FBtr0330387|FBtr0073437 11138943|11138901 11139689|11139689 AGTTAA 6mer3-8 dme-miR-999-3p X + 11139102 11139174 3'utr CG18292 FlyBase G45651.1 ACTTAATGGCCCTCGGGCCGCCGGACCATAGTTAAAGAATGTTTAGACTAGCTCAGGTTACAATCGGTTAAAT 19 11139144 0.967734243 5 19 107 1 1.380211242 0.208333333 0.157894737 0.333333333 19 0 0 24 X:11139102-11139174 6 18 5119 FBgn0030269 445.6566667 29.48666667 44.88 0.040389837 0.610445399 0.401069519 -13 -13 -13 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 11139630 11139635 + X_11139630_11139635_+ 1 1 1 0 CG18292 FBtr0073437|FBtr0330387 11138901|11138943 11139689|11139689 X + 11139587 11139653 3'utr CG18292 FlyBase G60404.1 ACTATATGTATGAGAGCAAATACGACTAAGTTCAAGCATGTATACCAAACCGAAACCGAAATCGAAA 15 11139627 0.774037782 7 13 57 0.894736842 1.230448921 0.105263158 0.2 0.368421053 15 2 0 17 X:11139587-11139653 6 CG18292 FBtr0330387|FBtr0073437 11138943|11138901 11139689|11139689 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 11139605 11139647 3'utr CG18292 FlyBase G45653.1 AATACGACTAAGTTCAAGCATGTATACCAAACCGAAACCGAAA 8 11139627 0.928481755 2 8 30 1 1.079181246 0.333333333 0.375 0.583333333 8 0 0 12 X:11139605-11139647 6 8 5120 FBgn0030269 445.6566667 29.48666667 44.88 0.017951039 0.271309066 0.178253119 3 3 3 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG X 11145014 11145019 - X_11145014_11145019_- 1 1 1 0 Ran FBtr0073472|FBtr0340164 11144850|11144850 11145648|11145648 X - 11144996 11145051 3'utr Ran FlyBase G66578.1 AGCGCAATAGCTGGCCAATGAACTGAGTCCCCCCAAAGGAAAATTAATACTATTGA 59 11145040 0.929803119 5 54 198 0.907894737 1.537819095 0.052631579 0.220338983 0.394736842 59 6 1 69 X:11144996-11145051 6 Ran FBtr0340164|FBtr0073472 11144850|11144850 11145648|11145648 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" X - 11145011 11145055 3'utr Ran FlyBase G50130.1 CGAGAGCGCAATAGCTGGCCAATGAACTGAGTCCCCCCAAAGGAA 37 11145040 0.863119069 3 34 118 0.941176471 1.681241237 0.196078431 0.243243243 0.450980392 37 3 0 48 X:11145011-11145055 6 36.5 5121 FBgn0020255 11523.11667 1210.89 1867.136667 0.003167546 0.030143118 0.019548649 21 21 21 0.01 dme-miR-33-5p 6mer3-8 CAATGC X 11163063 11163068 + X_11163063_11163068_+ 0.99999999 0.999999984 0.999999987 0 Dlic FBtr0073441|FBtr0073444|FBtr0073443 11162784|11162784|11162784 11163196|11164670|11164670 X + 11163009 11163090 3'utr Dlic FlyBase G60423.1 CAGTTTCGCAAGGGGCTAGCTTCTAAGTTGTTAAGTTGTTCCACGGAACGTGATCAATGCCCAGAGATTGTTCTTCATAACC 16 11163065 0.964295909 7 16 85 1 1.342422681 0.272727273 0.1875 0.409090909 16 0 0 22 X:11163009-11163090 6 Dlic FBtr0073441|FBtr0073444|FBtr0073443 11162784|11162784|11162784 11163196|11164670|11164670 CAATGC 6mer3-8 dme-miR-33-5p X + 11163041 11163174 3'utr Dlic FlyBase G45669.1 AAGTTGTTCCACGGAACGTGATCAATGCCCAGAGATTGTTCTTCATAACCAATTCAAAACTTTTAAGGTACTCATTTGATGGGTTCCATAGCCACTAGTGATTCTTTTTACGAGCCTTCTGCTTTATACTCAAA 15 11163066 0.980086076 9 14 100 1 1.255272505 0 0.2 0.333333333 15 0 0 18 X:11163041-11163174 6 11 5122 FBgn0030276 2529.746667 84.58333333 130.21 0.004348261 0.130049261 0.084478919 -2 -3 -2.5 0.01 dme-miR-2b-2-5p 6mer3-8 TTGAAG X 11163317 11163322 + X_11163317_11163322_+ 1 1 1 0 Dlic FBtr0073444|FBtr0073443 11162784|11162784 11164670|11164670 X + 11163263 11163343 3'utr Dlic FlyBase G60425.1 AAGAGTTGAGACATTCGCCACTTAATGGATAAGCTTAGGAAAAATGTTTTCTATTTGAAGGAGGGAAATTGTCTGCGAGGC 14 11163331 0.745316784 6 11 75 0.8 1.079181246 0.2 0.071428571 0.133333333 14 3 0 12 X:11163263-11163343 6 Dlic FBtr0073444|FBtr0073443 11162784|11162784 11164670|11164670 TTGAAG 6mer3-8 dme-miR-2b-2-5p X + 11163316 11163361 3'utr Dlic FlyBase G45670.1 TTTGAAGGAGGGAAATTGTCTGCGAGGCATCTTGTTGTGCTCCTCC 8 11163331 0.977789024 3 7 47 0.916666667 1.041392685 0.5 0.5 0.666666667 8 1 0 11 X:11163316-11163361 6 6.5 5123 FBgn0030276 2529.746667 84.58333333 130.21 0.002569427 0.076847291 0.049919361 -14 -14 -14 0.01 dme-miR-184-5p 6mer3-8 TGATAA X 11163453 11163458 + X_11163453_11163458_+ 1 1 1 0 Dlic FBtr0073444|FBtr0073443 11162784|11162784 11164670|11164670 X + 11163348 11163479 3'utr Dlic FlyBase G60426.1 TGTTGTGCTCCTCCCAGCGCAGCTAGCTCCGCTCTGCATGTGTTTAAAGGGCCTTGGCGAGATGACAGAGAGAGAGAGAGAGAGAGATAGAGAGAGAGAGGATAATGATAATGATAATGGTAACGATAATGA 41 11163451 0.96468802 11 35 183 0.844444444 1.278753601 0.155555556 0.097560976 0.177777778 41 6 1 38 X:11163348-11163479 6 Dlic FBtr0073444|FBtr0073443 11162784|11162784 11164670|11164670 TGATAA 6mer3-8 dme-miR-184-5p X + 11163392 11163473 3'utr Dlic FlyBase G45671.1 TAAAGGGCCTTGGCGAGATGACAGAGAGAGAGAGAGAGAGAGATAGAGAGAGAGAGGATAATGATAATGATAATGGTAACGA 34 11163451 0.947847317 6 29 122 0.875 1.213074825 0.178571429 0.5 0.696428571 34 5 2 49 X:11163392-11163473 6 28.5 5124 FBgn0030276 2529.746667 84.58333333 130.21 0.01126595 0.336945813 0.218877198 2 2 2 0.01 dme-miR-1007-3p 6mer3-8 TGAGCT X 11163564 11163569 + X_11163564_11163569_+ 0.999999898 0.999999761 0.99999983 7.07E-08 Dlic FBtr0073444|FBtr0073443 11162784|11162784 11164670|11164670 X + 11163554 11163658 3'utr Dlic FlyBase G60427.1 AATTATTTAATGAGCTGTAAAATGTAATTAACAAATGGCAGACAAACGAGAGATTCGAACACGATTCAAGATCCCTGCGATGATGAGTATGGCTTGCTACTAGCC 13 11163564 0.967206905 9 12 64 1 1.230448921 0.470588235 0.230769231 0.411764706 13 0 0 17 X:11163554-11163658 6 Dlic FBtr0073444|FBtr0073443 11162784|11162784 11164670|11164670 TGAGCT 6mer3-8 dme-miR-1007-3p X + 11163540 11163577 3'utr Dlic FlyBase G45672.1 ACATTTGTATAATAAATTATTTAATGAGCTGTAAAATG 6 11163564 0.977534853 2 6 45 1 1.041392685 0.636363636 0.666666667 0.818181818 6 0 0 11 X:11163540-11163577 6 6 5125 FBgn0030276 2529.746667 84.58333333 130.21 0.002371779 0.070935961 0.04607941 0 0 0 0.01 dme-miR-184-3p 6mer3-8 TCCGTC X 11163956 11163961 + X_11163956_11163961_+ 0.824671562 1 0.912335781 0.123975901 Dlic FBtr0073444|FBtr0073443 11162784|11162784 11164670|11164670 X + 11163904 11163971 3'utr Dlic FlyBase G60429.1 TCGATTTTAATGTAGAACTCTATCGTTATCCGCCCCAGAAGAGCAACCGCAGTCCGTCTTTATTTTAA 14 11163932 0.965649228 4 14 90 1 1.204119983 0.125 0.142857143 0.25 14 0 0 16 X:11163904-11163971 6 Dlic FBtr0073444|FBtr0073443 11162784|11162784 11164670|11164670 TCCGTC 6mer3-8 dme-miR-184-3p X + 11163921 11163967 3'utr Dlic FlyBase G45674.1 CTCTATCGTTATCCGCCCCAGAAGAGCAACCGCAGTCCGTCTTTATT 10 11163963 0.921712847 4 10 46 1 1.255272505 0.444444444 0.6 0.777777778 10 0 0 18 X:11163921-11163967 6 5 5126 FBgn0030276 2529.746667 84.58333333 130.21 0.001976482 0.0591133 0.038399508 24 -7 8.5 0.01 dme-miR-986-5p 6mer3-8 ATTCGA X 11324634 11324639 - X_11324634_11324639_- 1 1 1 0 l(1)10Bb FBtr0073460 11324292 11324669 X - 11324546 11324635 3'utr l(1)10Bb FlyBase G66607.1 GACACAAATAATCCTCATAATACATAGTTCAGTAGGTTCAACTTTAGATTTCGCCTGATTTCTTCATAGTATGTAAATACATTTAAATAC 60 11324627 0.953437492 11 57 643 0.953846154 1.491361694 0.076923077 0.083333333 0.153846154 60 2 1 62 X:11324546-11324635 2 l(1)10Bb FBtr0073460 11324292 11324669 ATTCGA 6mer3-8 dme-miR-986-5p X - 11324637 11324664 3'utr l(1)10Bb FlyBase G50153.1 ATGTGGACGCATTATTGGCATCTTTATT 5 11324639 0.648552939 3 5 34 1 0.903089987 0 0.6 0.75 5 0 0 8 X:11324637-11324664 2 5.5 5127 FBgn0001491 480.7 64.31666667 98.19333333 0.011441648 0.085514382 0.056011949 -12 0 -6 0.01 dme-miR-283-5p 8mer-m1 TGATATTT X 11333669 11333676 + X_11333669_11333676_+ 0.555593841 0.555593841 0.555593841 0 CG1657 FBtr0073448 11333527 11334071 X + 11333648 11333684 3'utr CG1657 FlyBase G60461.1 ATGTATATGTATGTCTGTGTCTGATATTTGTGTAAAA 7 11333668 0.614516572 5 7 65 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 X:11333648-11333684 8 CG1657 FBtr0073448 11333527 11334071 TGATATTT 8mer-m1 dme-miR-283-5p X + 11333603 11333677 3'utr CG1657 FlyBase G45699.1 TCCCATCCCACTCTCTCCTCCAGTCGATATTTTCCATATTTATATATGTATATGTATGTCTGTGTCTGATATTTG 10 11333663 0.991519419 6 10 108 1 1.278753601 0.157894737 0.7 0.842105263 10 0 0 19 X:11333603-11333677 8 7 5128 FBgn0030286 666.2266667 13.88 21.43333333 0.010506935 0.504322767 0.32659409 1 6 3.5 0.01 dme-miR-8-3p 7mer-A1 AGTATTA X 11334360 11334366 - X_11334360_11334366_- 0.823349562 0.823349562 0.823349562 0 Kap3 FBtr0343145|FBtr0289956|FBtr0289954|FBtr0289955|FBtr0343146 11334185|11334185|11334185|11334185|11334185 11334788|11334788|11334788|11334788|11334788 X - 11334337 11334428 3'utr Kap3 FlyBase G66610.1 ATGGCTTAGCTTCCACTTTGGTTGTTCGCAACGCAATTACTGTGCAATAATCTCTCACTTAAAGTATTACGTCGAACGTTTTTAGTTGTACT 11 11334370 0.990975075 9 10 91 0.909090909 1 0.272727273 0 0 11 1 0 10 X:11334337-11334428 7 Kap3 FBtr0289956|FBtr0289954|FBtr0289955|FBtr0343146|FBtr0343145 11334185|11334185|11334185|11334185|11334185 11334788|11334788|11334788|11334788|11334788 AGTATTA 7mer-A1 dme-miR-8-3p X - 11334350 11334428 3'utr Kap3 FlyBase G50154.1 ATGGCTTAGCTTCCACTTTGGTTGTTCGCAACGCAATTACTGTGCAATAATCTCTCACTTAAAGTATTACGTCGAACGT 10 11334369 0.980381356 6 9 83 0.909090909 1 0.090909091 0.1 0.181818182 10 1 0 10 X:11334350-11334428 7 7 5129 FBgn0028421 198.6666667 6.38 9.766666667 0.035234899 1.097178683 0.716723549 4 3 3.5 0.01 dme-miR-1007-3p 7mer-m8 TGAGCTT X 11344132 11344138 + X_11344132_11344138_+ 0.620203442 0.620203442 0.620203442 0 CG34348 FBtr0112557 11344094 11344734 X + 11344108 11344204 3'utr CG34348 FlyBase G60467.2 TAGCGCATAGAGAGATTAACAGATTGAGCTTGGTCCTGGCCATACAAAACAGACTTTGTTCCATGTACTTGATGACAGTACTTCATGGCAGCGCCAT 80 11344124 0.966840782 16 56 537 0.714285714 0.967815317 0.120879121 0.125 0.230769231 80 20 6 65 X:11344108-11344204 7 CG34348 FBtr0112557 11344094 11344734 TGAGCTT 7mer-m8 dme-miR-1007-3p X + 11344088 11344222 stop_codon CG34348 FlyBase G45703.1 AGGAGTGATCCATGATCGTTTAGCGCATAGAGAGATTAACAGATTGAGCTTGGTCCTGGCCATACAAAACAGACTTTGTTCCATGTACTTGATGACAGTACTTCATGGCAGCGCCATATATGCATATATCTCACT 59 11344124 0.986234546 14 42 388 0.727272727 1.158362492 0.070707071 0.423728814 0.656565657 59 23 4 72 X:11344088-11344222 7 50 5130 FBgn0085377 250.7633333 13.94666667 21.41 0.199391192 3.585086042 2.33535731 8 8 8 0.01 dme-miR-986-5p 6mer2-7 TTCGAG X 11344251 11344256 + X_11344251_11344256_+ 1 1 1 0 CG34348 FBtr0112557 11344094 11344734 X + 11344224 11344330 3'utr CG34348 FlyBase G60468.1 TGTAAATGCCTACCCAGAACTTTTGCCTTCGAGTTGATTGCGATCCGGACGAGCTGTGGCTCGAGTATGAGTGATTCGATTAGCCCTTTAGATATGACTAAGCACTT 26 11344246 0.767994193 10 25 194 0.931034483 1.431363764 0.310344828 0.115384615 0.206896552 26 2 0 27 X:11344224-11344330 6 CG34348 FBtr0112557 11344094 11344734 TTCGAG 6mer2-7 dme-miR-986-5p X + 11344227 11344303 3'utr CG34348 FlyBase G45703.2 AAATGCCTACCCAGAACTTTTGCCTTCGAGTTGATTGCGATCCGGACGAGCTGTGGCTCGAGTATGAGTGATTCGAT 21 11344246 0.862334063 8 19 135 1 1.531478917 0.294117647 0.428571429 0.647058824 21 0 0 34 X:11344227-11344303 6 12.5 5131 FBgn0085377 250.7633333 13.94666667 21.41 0.049847798 0.896271511 0.583839327 5 5 5 0.01 dme-miR-33-5p 7mer-A1 AATGCAA X 11344532 11344538 + X_11344532_11344538_+ 0.782911824 0.782911824 0.782911824 0 CG34348 FBtr0112557 11344094 11344734 X + 11344470 11344542 3'utr CG34348 FlyBase G60469.1 AGGCACATTAAGCAATTATGTCGCTAGTTTTCCATTAGGTATATCATTTTTGTACCTTTTTTAATGCAACAGT 5 11344529 0.988405962 5 5 58 1 0.698970004 0.2 0 0 5 0 0 5 X:11344470-11344542 7 CG34348 FBtr0112557 11344094 11344734 AATGCAA 7mer-A1 dme-miR-33-5p X + 11344510 11344542 3'utr CG34348 FlyBase G45705.1 ATATCATTTTTGTACCTTTTTTAATGCAACAGT 4 11344529 0.985609229 4 4 34 1 0.698970004 0.2 0.25 0.4 4 0 0 5 X:11344510-11344542 7 3 5132 FBgn0085377 250.7633333 13.94666667 21.41 0.011963472 0.215105163 0.140121439 3 3 3 0.01 dme-miR-932-5p 6mer3-8 GGAATT X 11344694 11344699 + X_11344694_11344699_+ 0.591720885 0.591720885 0.591720885 0 CG34348 FBtr0112557 11344094 11344734 X + 11344660 11344725 3'utr CG34348 FlyBase G60470.1 ATATAGCTATAACACCGGAGTATTCCCAGCGACAGGAATTTTCAATAGATCTATGGAATAAAAGTG 10 11344713 0.97665276 3 10 66 1 1.041392685 0.363636364 0.1 0.181818182 10 0 0 11 X:11344660-11344725 6 CG34348 FBtr0112557 11344094 11344734 GGAATT 6mer3-8 dme-miR-932-5p X + 11344623 11344719 3'utr CG34348 FlyBase G45706.1 GTGTGTGTGTACTATATAGTTAAGAAAATCGTGTATAATATAGCTATAACACCGGAGTATTCCCAGCGACAGGAATTTTCAATAGATCTATGGAATA 9 11344713 0.976725896 6 9 57 1 1.041392685 0.363636364 0.222222222 0.363636364 9 0 0 11 X:11344623-11344719 6 6 5133 FBgn0085377 250.7633333 13.94666667 21.41 0.023926943 0.430210325 0.280242877 -19 -19 -19 0.01 dme-miR-317-3p 6mer3-8 TGTGTT X 11345162 11345167 - X_11345162_11345167_- 1 1 1 0 CG1597 FBtr0307491|FBtr0290227 11344801|11344504 11345266|11345266 X - 11345142 11345180 3'utr CG1597 FlyBase G66623.1 ATGCGTTTTTGTGTGTGTTTGGAATAGCTGGGTGCTTCA 6 11345161 0.7869796 4 6 63 1 0.903089987 0.25 0.333333333 0.5 6 0 0 8 X:11345142-11345180 6 CG1597 FBtr0307491|FBtr0290227 11344801|11344504 11345266|11345266 TGTGTT 6mer3-8 dme-miR-317-3p X - 11345145 11345243 3'utr CG1597 FlyBase G50165.1 CTGCCAAAACTGCTGTGAGTTCCTCAACGAACGACCCTGTCCCCGCATTCCTGGCGAAGATCAATGCGTTTTTGTGTGTGTTTGGAATAGCTGGGTGCT 12 11345161 0.981176781 7 11 78 0.928571429 0.812913357 0 0.166666667 0.285714286 12 0 1 13 X:11345145-11345243 6 5 5134 FBgn0030289 291.8433333 10.33 15.84666667 0.01713248 0.484027106 0.315523769 -6 -6 -6 0.01 dme-miR-79-3p 6mer3-8 TAGCTT X 11349754 11349759 + X_11349754_11349759_+ 1 1 1 0 CG1738 FBtr0073451 11349719 11349847 X + 11349749 11349787 3'utr CG1738 FlyBase G60471.1 AAAACTAGCTTAGTCAAAGGATGGCACTGTTTAAAAATC 15 11349770 0.953344894 3 15 103 1 1.255272505 0.055555556 0.2 0.333333333 15 0 0 18 X:11349749-11349787 6 CG1738 FBtr0073451 11349719 11349847 TAGCTT 6mer3-8 dme-miR-79-3p X + 11349746 11349787 3'utr CG1738 FlyBase G45707.1 ACTAAAACTAGCTTAGTCAAAGGATGGCACTGTTTAAAAATC 11 11349770 0.885364073 5 11 71 1 1.255272505 0 0.363636364 0.611111111 11 0 0 18 X:11349746-11349787 6 9 5135 FBgn0030291 118.3333333 19.25 29.82 0.076056338 0.467532468 0.301810865 -16 -16 -16 0.01 dme-miR-317-3p 6mer3-8 TGTGTT X 11358250 11358255 + X_11358250_11358255_+ 1 1 1 0 dsh FBtr0073454 11358224 11358724 X + 11358158 11358271 stop_codon dsh FlyBase G60497.1 GAGGCGGTGGCGGTGGCGGCAACAATACCAACGATCAGGACGTATCCGTATTTAATTACGTATTGTAGAAACCTTTCTTTTTGCAATCAAATTGTGTTTTTAATTAATTAAATT 20 11358249 0.986814766 9 18 158 0.956521739 1.342422681 0.043478261 0.1 0.217391304 20 1 0 22 X:11358158-11358271 6 dsh FBtr0073454 11358224 11358724 TGTGTT 6mer3-8 dme-miR-317-3p X + 11358233 11358273 3'utr dsh FlyBase G45723.1 TCTTTTTGCAATCAAATTGTGTTTTTAATTAATTAAATTAA 5 11358249 0.975905947 2 5 73 1 0.903089987 0 0.6 0.75 5 0 0 8 X:11358233-11358273 6 7 5136 FBgn0000499 392 16.79 25.82333333 0.017857143 0.41691483 0.271072673 1 1 1 0.01 dme-miR-980-3p 6mer3-8 GGCAGC X 11358641 11358646 + X_11358641_11358646_+ 1 1 1 0 dsh FBtr0073454 11358224 11358724 X + 11358631 11358671 3'utr dsh FlyBase G60498.1 GAGCAGGAACGGCAGCATGACGGGCGAGAATGATTTTGAAT 9 11358665 0.887329434 3 9 25 1 0.954242509 0.333333333 0 0 9 0 0 9 X:11358631-11358671 6 dsh FBtr0073454 11358224 11358724 GGCAGC 6mer3-8 dme-miR-980-3p X + 11358632 11358683 3'utr dsh FlyBase G45725.1 AGCAGGAACGGCAGCATGACGGGCGAGAATGATTTTGAATAAAGTTCTAAGA 7 11358664 0.959415663 6 7 34 1 1 0.2 0.428571429 0.6 7 0 0 10 X:11358632-11358683 6 3.5 5137 FBgn0000499 392 16.79 25.82333333 0.008928571 0.208457415 0.135536337 -24 -23 -23.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC X 11359835 11359840 + X_11359835_11359840_+ 1 1 1 0 Pa1 FBtr0073456 11359762 11360929 X + 11359748 11359856 stop_codon Pa1 FlyBase G60500.1 TGCCGAGAGCTCATAGCACCCGCCGAAATTCTGATGCTGATCCGGTCCAGGCAATCGGCTGCAGATCGTACTCTATCGCCATGCGGACTAGTCTATAAGCATCAGTCGT 42 11359841 0.819898195 9 38 225 0.914893617 1.33243846 0.234042553 0.119047619 0.212765957 42 3 1 43 X:11359748-11359856 6 Pa1 FBtr0073456 11359762 11360929 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" X + 11359817 11359861 3'utr Pa1 FlyBase G45727.1 ACTCTATCGCCATGCGGACTAGTCTATAAGCATCAGTCGTTTTAC 22 11359842 0.750031125 3 20 134 0.972222222 1.243038049 0.138888889 0.409090909 0.638888889 22 0 1 35 X:11359817-11359861 6 25 5138 FBgn0030294 242.3333333 18.24 28.02 0.103163686 1.370614035 0.892219843 -6 -7 -6.5 0.01 dme-miR-2b-2-5p 6mer3-8 TTGAAG X 11359988 11359993 + X_11359988_11359993_+ 1 1 1 0 Pa1 FBtr0073456 11359762 11360929 X + 11359977 11360009 3'utr Pa1 FlyBase G60502.1 ATTTAGAGAGTTTGAAGTTTGAACATCAAAACA 9 11359988 0.750827602 3 9 69 1 1 0 0.111111111 0.2 9 0 0 10 X:11359977-11360009 6 Pa1 FBtr0073456 11359762 11360929 TTGAAG 6mer3-8 dme-miR-2b-2-5p X + 11359976 11360009 3'utr Pa1 FlyBase G45729.1 CATTTAGAGAGTTTGAAGTTTGAACATCAAAACA 10 11359988 0.74403505 4 9 69 0.9375 0.875061263 0.125 0.5 0.6875 10 0 1 15 X:11359976-11360009 6 9 5139 FBgn0030294 242.3333333 18.24 28.02 0.037138927 0.493421053 0.321199143 0 0 0 0.01 dme-miR-277-3p 6mer3-8 TGCATT X 11360237 11360242 + X_11360237_11360242_+ 1 1 1 0 Pa1 FBtr0073456 11359762 11360929 X + 11360219 11360272 3'utr Pa1 FlyBase G60503.1 AAGGATGTTAACTCCCATTGCATTGGTCAGTTCTTCATTTTAGACTAAGAACTT 8 11360258 0.989126223 6 8 73 1 1 0.1 0.25 0.4 8 0 0 10 X:11360219-11360272 6 Pa1 FBtr0073456 11359762 11360929 TGCATT 6mer3-8 dme-miR-277-3p X + 11360219 11360267 3'utr Pa1 FlyBase G45730.1 AAGGATGTTAACTCCCATTGCATTGGTCAGTTCTTCATTTTAGACTAAG 5 11360258 0.988129941 5 5 47 1 0.698970004 0.2 0 0 5 0 0 5 X:11360219-11360267 6 5 5140 FBgn0030294 242.3333333 18.24 28.02 0.020632737 0.274122807 0.178443969 -21 -21 -21 0.01 dme-miR-1007-3p 6mer3-8 TGAGCT X 11360735 11360740 + X_11360735_11360740_+ 1 0.880336326 0.940168163 0.084615014 Pa1 FBtr0073456 11359762 11360929 X + 11360661 11360789 3'utr Pa1 FlyBase G60506.1 AGTCAACTTCCGTACATACAACTAATACGAAATGAATCAGCACAGTTGCCCTACTAAACAATATCAACTTCTCATGAGCTAAAAATAGACTACTAAGAATTATGATAAGCCAAGGTTGTTCCGGAAAAC 19 11360735 0.976716669 9 16 97 0.85 1.230448921 0.15 0.052631579 0.1 19 3 0 17 X:11360661-11360789 6 Pa1 FBtr0073456 11359762 11360929 TGAGCT 6mer3-8 dme-miR-1007-3p X + 11360701 11360764 3'utr Pa1 FlyBase G45734.1 CACAGTTGCCCTACTAAACAATATCAACTTCTCATGAGCTAAAAATAGACTACTAAGAATTATG 16 11360746 0.964495768 6 15 83 0.95 1.278753601 0.1 0.25 0.4 16 1 0 19 X:11360701-11360764 6 14 5141 FBgn0030294 242.3333333 18.24 28.02 0.057771664 0.76754386 0.499643112 0 -11 -5.5 0.01 dme-miR-968-5p 6mer2-7 CTACTT X 11361424 11361429 - X_11361424_11361429_- 0.48537645 0.969719626 0.727548038 0.34248229 hop FBtr0073457 11360928 11361814 X - 11361402 11361456 3'utr hop FlyBase G66628.1 ATGTATATGTATAAACAAATTCTCAACCTACTTTGTGTTATACATTTTAGACAAC 30 11361425 0.728777607 6 29 268 0.970588235 1.51851394 0 0.133333333 0.235294118 30 1 0 33 X:11361402-11361456 6 hop FBtr0073457 11360928 11361814 CTACTT 6mer2-7 dme-miR-968-5p X - 11361365 11361450 3'utr hop FlyBase G50168.1 ATGTATAAACAAATTCTCAACCTACTTTGTGTTATACATTTTAGACAACTTTGTTAAATATTGTTAAGCTTGAGCTTCAATTTTTT 22 11361425 0.983430569 5 22 173 1 1.556302501 0.055555556 0.454545455 0.666666667 22 0 0 36 X:11361365-11361450 6 23.5 5142 FBgn0004864 288.6033333 6.79 10.3 0.081426641 3.460972018 2.281553398 -4 -4 -4 0.01 dme-miR-277-3p 6mer2-7 GCATTT X 11361589 11361594 - X_11361589_11361594_- 1 1 1 0 hop FBtr0073457 11360928 11361814 X - 11361530 11361606 3'utr hop FlyBase G66629.1 ACGCCATCGCAAGCATTTTTGGATTCTCGCCAGATCTTAGTTTTATTTGATTGTGCTTACCACTGGCCACGCCCCCC 10 11361585 0.978012723 7 9 71 0.846153846 1.041392685 0.230769231 0.3 0.461538462 10 2 0 11 X:11361530-11361606 6 hop FBtr0073457 11360928 11361814 GCATTT 6mer2-7 dme-miR-277-3p X - 11361540 11361618 3'utr hop FlyBase G50169.1 CCGGATACACTTACGCCATCGCAAGCATTTTTGGATTCTCGCCAGATCTTAGTTTTATTTGATTGTGCTTACCACTGGC 10 11361588 0.984422444 8 9 74 1 1.230448921 0.058823529 0.5 0.705882353 10 0 0 17 X:11361540-11361618 6 5 5143 FBgn0004864 288.6033333 6.79 10.3 0.017324817 0.736377025 0.485436893 -9 -6 -7.5 0.01 dme-miR-184-3p 6mer3-8 TCCGTC X 11368939 11368944 + X_11368939_11368944_+ 1 1 1 0 Tim8 FBtr0343640|FBtr0073482 11368879|11368879 11369283|11369183 X + 11368894 11368967 3'utr Tim8 FlyBase G60510.1 ATCGACACCGACACCGGGATCTGGGTATCCGAGTCCGTGGACGCTTCCGTCACTGTCCTACTGTTAAATCTATT 130 11368938 0.97920259 9 127 869 0.98 2.167317335 0.12 0.130769231 0.246666667 130 3 0 147 X:11368894-11368967 6 Tim8 FBtr0343640|FBtr0073482 11368879|11368879 11369283|11369183 TCCGTC 6mer3-8 dme-miR-184-3p X + 11368919 11368961 3'utr Tim8 FlyBase G45735.1 TATCCGAGTCCGTGGACGCTTCCGTCACTGTCCTACTGTTAAA 65 11368938 0.810731683 5 65 406 1 1.973127854 0.095744681 0.323076923 0.531914894 65 0 0 94 X:11368919-11368961 6 95 5144 FBgn0027359 213.3333333 41.63666667 63.68333333 0.4453125 2.281642783 1.491756085 1 1 1 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG X 11388263 11388268 + X_11388263_11388268_+ 1 1 1 0 dlg1 FBtr0073483|FBtr0073491|FBtr0073492|FBtr0302114|FBtr0333263 11388173|11388173|11388173|11388173|11388173 11389291|11389291|11389291|11389291|11389291 X + 11388243 11388283 3'utr dlg1 FlyBase G60511.1 AAGGAGGTGGAAAACAGCTGGCTGTGTAATTAGCCCCCCCC 11 11388261 0.962726822 3 11 52 1 1.041392685 0 0 0 11 0 0 11 X:11388243-11388283 6 dlg1 FBtr0333263|FBtr0302114|FBtr0073492|FBtr0073491|FBtr0073483 11388173|11388173|11388173|11388173|11388173 11389291|11389291|11389291|11389291|11389291 GCTGTG 6mer2-7 dme-miR-1008-3p X + 11388220 11388273 3'utr dlg1 FlyBase G45736.1 AGCAATCAGCTCGCGGAAAAGCCAAGGAGGTGGAAAACAGCTGGCTGTGTAATT 7 11388261 0.964536224 2 6 27 0.833333333 1 0.333333333 0.571428571 0.75 7 2 0 10 X:11388220-11388273 6 8 5145 FBgn0001624 7812.856667 177.1533333 273.5833333 0.001023953 0.04515862 0.029241547 2 2 2 0.01 dme-miR-980-5p 7mer-A1 AAAAACA X 11406869 11406875 + X_11406869_11406875_+ 0.782911824 0.782911824 0.782911824 0 dlg1 FBtr0330390|FBtr0301289|FBtr0073485|FBtr0112813|FBtr0073486|FBtr0073488|FBtr0308088|FBtr0073489|FBtr0073487|FBtr0308089|FBtr0333261|FBtr0112812|FBtr0073490|FBtr0333262 11406300|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177 11407751|11407751|11407751|11409776|11407751|11407751|11407985|11407751|11407751|11408338|11408338|11409776|11407751|11409776 X + 11406837 11406918 3'utr dlg1 FlyBase G60526.1 ACACCCACTTATATAGGTTAAGATCCGATTATAAAAACATAGAGAAGAGCGAAAATGAGGGCTTTCTGGAGTTCGTTAAGCG 31 11406892 0.963504158 7 30 156 1 1.531478917 0.382352941 0.096774194 0.176470588 31 0 0 34 X:11406837-11406918 7 dlg1 FBtr0073487|FBtr0333261|FBtr0112812|FBtr0073490|FBtr0308089|FBtr0333262|FBtr0073489|FBtr0073485|FBtr0301289|FBtr0073486|FBtr0112813|FBtr0073488|FBtr0330390|FBtr0308088 11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406300|11406177 11407751|11408338|11409776|11407751|11408338|11409776|11407751|11407751|11407751|11407751|11409776|11407751|11407751|11407985 AAAAACA 7mer-A1 dme-miR-980-5p X + 11406829 11406918 3'utr dlg1 FlyBase G45740.1 AGATATATACACCCACTTATATAGGTTAAGATCCGATTATAAAAACATAGAGAAGAGCGAAAATGAGGGCTTTCTGGAGTTCGTTAAGCG 20 11406892 0.918551886 7 19 121 0.962962963 1.414973348 0.222222222 0.25 0.444444444 20 1 0 26 X:11406829-11406918 7 4 5146 FBgn0001624 7812.856667 177.1533333 273.5833333 0.000511977 0.02257931 0.014620774 -23 -23 -23 0.01 dme-miR-13b-2-5p 7mer-m1 TTGACGC X 11407329 11407335 + X_11407329_11407335_+ 0.829692068 0.829692068 0.829692068 0 dlg1 FBtr0330390|FBtr0301289|FBtr0073485|FBtr0112813|FBtr0073486|FBtr0073488|FBtr0308088|FBtr0073489|FBtr0073487|FBtr0308089|FBtr0333261|FBtr0112812|FBtr0073490|FBtr0333262 11406300|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177 11407751|11407751|11407751|11409776|11407751|11407751|11407985|11407751|11407751|11408338|11408338|11409776|11407751|11409776 X + 11407318 11407377 3'utr dlg1 FlyBase G60531.1 ATTGATGAATATTGACGCTAATAACGATGGAGATGATGAAAAACGTTGGTGCATTTGTTG 22 11407329 0.767864433 6 20 125 0.935483871 1.462397998 0.322580645 0.227272727 0.451612903 22 2 0 29 X:11407318-11407377 7 dlg1 FBtr0073487|FBtr0333261|FBtr0112812|FBtr0073490|FBtr0308089|FBtr0333262|FBtr0073489|FBtr0073485|FBtr0301289|FBtr0073486|FBtr0112813|FBtr0073488|FBtr0330390|FBtr0308088 11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406300|11406177 11407751|11408338|11409776|11407751|11408338|11409776|11407751|11407751|11407751|11407751|11409776|11407751|11407751|11407985 TTGACGC 7mer-m1 dme-miR-13b-2-5p X + 11407309 11407423 3'utr dlg1 FlyBase G45743.1 TAAATATATATTGATGAATATTGACGCTAATAACGATGGAGATGATGAAAAACGTTGGTGCATTTGTTGTTAGATGTATGTAATTTTTCCCACTCGCCTTTGCCTAAAAGCAACA 27 11407329 0.861610961 10 26 188 0.974358974 1.278753601 0.358974359 0.333333333 0.538461538 27 0 1 38 X:11407309-11407423 7 14.5 5147 FBgn0001624 7812.856667 177.1533333 273.5833333 0.001855915 0.081849998 0.053000305 0 0 0 0.01 dme-miR-1006-3p 6mer2-7 GAATTT X 11431651 11431656 - X_11431651_11431656_- 1 1 1 0 Evi5 FBtr0300733|FBtr0332620|FBtr0073547 11431331|11431331|11430521 11433279|11434760|11433279 X - 11431625 11431683 3'utr Evi5 FlyBase G66653.1 TTGTTCTCGACTTTGGCAGAACTATTAGAATTTTTTGTTCTACGCGATAATTAATGATT 10 11431651 0.838450787 6 10 87 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 X:11431625-11431683 6 Evi5 FBtr0300733|FBtr0332620|FBtr0073547 11431331|11431331|11430521 11433279|11434760|11433279 GAATTT 6mer2-7 dme-miR-1006-3p X - 11431653 11431683 3'utr Evi5 FlyBase G50185.1 TTGTTCTCGACTTTGGCAGAACTATTAGAAT 7 11431670 0.742595386 2 6 58 0.857142857 0.77815125 0.142857143 0 0 7 1 0 6 X:11431653-11431683 3 3.5 5148 FBgn0262740 507.6533333 10.50666667 16.15 0.006894469 0.333121827 0.216718266 -5 14 4.5 0.01 dme-miR-79-3p 6mer3-8 TAGCTT X 11431755 11431760 - X_11431755_11431760_- 1 1 1 0 Evi5 FBtr0300733|FBtr0332620|FBtr0073547 11431331|11431331|11430521 11433279|11434760|11433279 X - 11431705 11431798 3'utr Evi5 FlyBase G66654.1 AGCAAGAGAAATAAGAGAGATCTATGTAATAGGATTCGTAGCTTGTAAGAATGTCGAAAATGATGTCACAAAACTTTGTTATGTAAACACTAAG 14 11431736 0.999730104 7 14 86 1 1.176091259 0.2 0.071428571 0.133333333 14 0 0 15 X:11431705-11431798 6 Evi5 FBtr0300733|FBtr0332620|FBtr0073547 11431331|11431331|11430521 11433279|11434760|11433279 TAGCTT 6mer3-8 dme-miR-79-3p X - 11431691 11431806 3'utr Evi5 FlyBase G50186.1 TAAAAAACAGCAAGAGAAATAAGAGAGATCTATGTAATAGGATTCGTAGCTTGTAAGAATGTCGAAAATGATGTCACAAAACTTTGTTATGTAAACACTAAGTATATATGTAATGC 17 11431737 0.970484836 9 17 99 1 1.414973348 0.153846154 0.529411765 0.692307692 17 0 0 26 X:11431691-11431806 6 4 5149 FBgn0262740 507.6533333 10.50666667 16.15 0.007879393 0.38071066 0.247678019 -24 -23 -23.5 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT X 11432091 11432097 - X_11432091_11432097_- 0.658999527 0.658999527 0.658999527 0 Evi5 FBtr0300733|FBtr0332620|FBtr0073547 11431331|11431331|11430521 11433279|11434760|11433279 X - 11432053 11432118 3'utr Evi5 FlyBase G66657.1 TGGTTCATTTAACCCATATTTGGCAGCTTGTCGCGTAAAACGATTTCGATTTTGACATCGACTTTC 310 11432098 0.7391194 10 302 2354 0.974093264 2.274157849 0.007772021 0.193548387 0.352331606 310 9 1 376 X:11432053-11432118 7 Evi5 FBtr0300733|FBtr0332620|FBtr0073547 11431331|11431331|11430521 11433279|11434760|11433279 GGCAGCT 7mer-m8 dme-miR-980-3p X - 11432058 11432127 3'utr Evi5 FlyBase G50187.1 TGATTTATATGGTTCATTTAACCCATATTTGGCAGCTTGTCGCGTAAAACGATTTCGATTTTGACATCGA 151 11432098 0.978917616 10 149 1096 0.99122807 2.354108439 0.00877193 0.370860927 0.583333333 151 2 0 226 X:11432058-11432127 7 226.5 5150 FBgn0262740 507.6533333 10.50666667 16.15 0.446170615 21.55774112 14.0247678 1 1 1 0.01 dme-miR-1003-3p 7mer-A1 TGTGAGA X 11432830 11432836 - X_11432830_11432836_- 0.823349562 0.823349562 0.823349562 0 Evi5 FBtr0300733|FBtr0332620|FBtr0073547 11431331|11431331|11430521 11433279|11434760|11433279 X - 11432695 11432896 3'utr Evi5 FlyBase G66660.1 ATGTTTTGCAATCGAAACACACTCATATTTATTTATTTTAAATCCTAATTGAAACGATATTGTGAGAGTATTTTACACCCCTGTACATTAATCAATACGGCAACTAATCCGATTCGATGCGATGCGATGGATTGGAGTTAGGAGATTGGCATTTTGATATACCCTAGATGTATGGCACATATGCAATGCAATGAATTTTATG 80 11432837 0.900703208 25 75 580 0.943820225 1.225309282 0.101123596 0.1 0.191011236 80 1 4 84 X:11432695-11432896 7 Evi5 FBtr0300733|FBtr0332620|FBtr0073547 11431331|11431331|11430521 11433279|11434760|11433279 TGTGAGA 7mer-A1 dme-miR-1003-3p X - 11432781 11432850 3'utr Evi5 FlyBase G50188.2 AATTGAAACGATATTGTGAGAGTATTTTACACCCCTGTACATTAATCAATACGGCAACTAATCCGATTCG 31 11432837 0.767691074 5 28 190 0.954545455 1.62324929 0.295454545 0.35483871 0.545454545 31 2 0 42 X:11432781-11432850 7 31 5151 FBgn0262740 507.6533333 10.50666667 16.15 0.061065294 2.950507614 1.919504644 1 1 1 0.01 dme-miR-308-3p 8mer-m1 CTGTGATT X 11433094 11433101 - X_11433094_11433101_- 0.385560641 0.385560641 0.385560641 0 Evi5 FBtr0300733|FBtr0332620|FBtr0073547 11431331|11431331|11430521 11433279|11434760|11433279 X - 11433018 11433117 3'utr Evi5 FlyBase G66661.1 CATATATATGAGGGGCCTGTGATTATGAAACGGAAAGGGAAGGTGGAGCATCGAGTGGAGGGAGAAGTAGAAGGAAGAGGGCAGAATAGTTGCAATCCCA 29 11433093 0.969947899 8 24 131 0.903225806 1.447158031 0.193548387 0.034482759 0.096774194 29 3 0 28 X:11433018-11433117 8 Evi5 FBtr0300733|FBtr0332620|FBtr0073547 11431331|11431331|11430521 11433279|11434760|11433279 CTGTGATT 8mer-m1 dme-miR-308-3p X - 11433068 11433119 3'utr Evi5 FlyBase G50189.2 TACATATATATGAGGGGCCTGTGATTATGAAACGGAAAGGGAAGGTGGAGCA 16 11433093 0.793407399 7 12 72 0.833333333 1 0.125 0.375 0.583333333 16 3 1 20 X:11433068-11433119 8 14 5152 FBgn0262740 507.6533333 10.50666667 16.15 0.027577875 1.33248731 0.866873065 -8 -8 -8 0.01 dme-bantam-3p 6mer3-8 TGATCT X 11433320 11433325 - X_11433320_11433325_- 1 1 1 0 Evi5 FBtr0332620 11431331 11434760 X - 11433253 11433352 stop_codon Evi5 FlyBase G66662.1 GATCGAATCGACCGAGATCGACTTCAATGATCTGAATATGGTGAGGCGCGGAAGTACGGAGCTCTCCACATAACCTACAGATGGATCAGATCTAGCATAT 64 11433325 0.976300365 5 64 412 1 1.880813592 0.328947368 0.15625 0.289473684 64 0 0 76 X:11433253-11433352 6 Evi5 FBtr0332620 11431331 11434760 TGATCT 6mer3-8 dme-bantam-3p X - 11433299 11433346 3'utr Evi5 FlyBase G50190.1 ATCGACCGAGATCGACTTCAATGATCTGAATATGGTGAGGCGCGGAAG 35 11433325 0.875833396 3 33 232 0.934782609 1.633468456 0.52173913 0.228571429 0.413043478 35 3 0 43 X:11433299-11433346 6 48 5153 FBgn0262740 507.6533333 10.50666667 16.15 0.094552713 4.568527919 2.972136223 0 0 0 0.01 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC X 11458575 11458580 + X_11458575_11458580_+ 0.999990938 0.999999623 0.99999528 6.15E-06 HP5 FBtr0073499 11458311 11459227 X + 11458564 11458586 3'utr HP5 FlyBase G60557.1 GAGAAAGCTATTGGTGCAAACGT 6 11458575 0.600288547 3 6 22 1 0.903089987 0 0.166666667 0.375 6 0 0 8 X:11458564-11458586 6 HP5 FBtr0073499 11458311 11459227 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" X + 11458537 11458584 3'utr HP5 FlyBase G45762.1 GTTGAAAATACCAAAGTATTTTTGCAAGAGAAAGCTATTGGTGCAAAC 6 11458575 0.960394324 3 5 24 0.9 0.653212514 0.5 0.333333333 0.6 6 0 1 9 X:11458537-11458584 6 4.5 5154 FBgn0030301 1355.486667 49.67666667 76.80666667 0.003319841 0.090585788 0.058588664 0 0 0 0.01 dme-miR-190-5p 6mer3-8 ACATAT X 11458863 11458868 + X_11458863_11458868_+ 0.999999984 0.64769739 0.823848687 0.249115557 HP5 FBtr0073499 11458311 11459227 X + 11458824 11458871 3'utr HP5 FlyBase G60560.1 TTTTGACAACTTAGATTTAAGAAACACTTGCGTTCATGCACATATATA 40 11458851 0.887226136 4 40 318 1 1.653212514 0.244444444 0.1 0.2 40 0 0 45 X:11458824-11458871 6 HP5 FBtr0073499 11458311 11459227 ACATAT 6mer3-8 dme-miR-190-5p X + 11458826 11458867 3'utr HP5 FlyBase G45764.1 TTGACAACTTAGATTTAAGAAACACTTGCGTTCATGCACATA 25 11458851 0.882089391 5 25 181 1 1.544068044 0.285714286 0.4 0.571428571 25 0 0 35 X:11458826-11458867 5 11.5 5155 FBgn0030301 1355.486667 49.67666667 76.80666667 0.008484038 0.231497014 0.149726586 12 12 12 0.01 dme-miR-263a-5p 7mer-A1 TGCCATA X 11459084 11459090 + X_11459084_11459090_+ 0.782911824 0.782911824 0.782911824 0 HP5 FBtr0073499 11458311 11459227 X + 11459076 11459113 3'utr HP5 FlyBase G60561.1 ATTGACGTTGCCATATTGTGAAAAGTCTTGTACCGTTT 10 11459091 0.701064884 3 10 68 1 1.079181246 0.25 0.2 0.333333333 10 0 0 12 X:11459076-11459113 7 HP5 FBtr0073499 11458311 11459227 TGCCATA 7mer-A1 dme-miR-263a-5p X + 11459071 11459111 3'utr HP5 FlyBase G45765.1 CGAACATTGACGTTGCCATATTGTGAAAAGTCTTGTACCGT 12 11459091 0.695644136 4 10 89 0.777777778 1.146128036 0.166666667 0.5 0.666666667 12 4 0 14 X:11459071-11459111 7 9.5 5156 FBgn0030301 1355.486667 49.67666667 76.80666667 0.007008553 0.191236664 0.12368718 -7 -7 -7 0.01 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT X 11553276 11553282 + X_11553276_11553282_+ 0.620204026 0.620204017 0.620204022 0 Drak FBtr0301021|FBtr0340295|FBtr0301020 11552953|11552953|11552953 11555045|11555045|11555045 X + 11553218 11553302 3'utr Drak FlyBase G60586.1 AATAGGAAACGGGAACGGGAACTTAAACTTGAACTGGAATTGGAAGTGGAGCTGGAATTGGTGCTGCAGCGGGAGATGGAAGTGG 26 11553275 0.970333928 8 23 132 0.882352941 1.477121255 0.852941176 0.269230769 0.441176471 26 4 0 30 X:11553218-11553302 7 Drak FBtr0301021|FBtr0340295|FBtr0301020 11552953|11552953|11552953 11555045|11555045|11555045 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" X + 11553245 11553297 3'utr Drak FlyBase G45781.1 CTTGAACTGGAATTGGAAGTGGAGCTGGAATTGGTGCTGCAGCGGGAGATGGA 9 11553275 0.967972778 2 7 43 0.8 0.903089987 0.4 0.111111111 0.2 9 2 0 8 X:11553245-11553297 7 13 5157 FBgn0052666 1917.906667 50.05 76.71666667 0.006778223 0.25974026 0.169454703 1 1 1 0.01 dme-miR-980-5p 6mer3-8 GAAAAA X 11554670 11554675 + X_11554670_11554675_+ 1 0.999999993 0.999999997 0 Drak FBtr0301021|FBtr0340295|FBtr0301020 11552953|11552953|11552953 11555045|11555045|11555045 X + 11554668 11554708 3'utr Drak FlyBase G60588.1 AAGAAAAATGCTTAATTTATCGTAATCGATTACCCTTTTCT 7 11554697 0.861317281 3 7 63 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 X:11554668-11554708 6 Drak FBtr0301021|FBtr0340295|FBtr0301020 11552953|11552953|11552953 11555045|11555045|11555045 GAAAAA 6mer3-8 dme-miR-980-5p X + 11554657 11554713 3'utr Drak FlyBase G45782.1 GTTAATTGTTAAAGAAAAATGCTTAATTTATCGTAATCGATTACCCTTTTCTTTTAT 8 11554696 0.991356988 4 8 87 1 1.204119983 0 0.375 0.6875 8 0 0 16 X:11554657-11554713 6 2.5 5158 FBgn0052666 1917.906667 50.05 76.71666667 0.001303505 0.04995005 0.032587443 -27 -26 -26.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 11555420 11555425 - X_11555420_11555425_- 1 1 1 0 CG1572 FBtr0073544|FBtr0073544|FBtr0073544|FBtr0073543|FBtr0073543|FBtr0073543|FBtr0339694|FBtr0339694|FBtr0339694|FBtr0339693|FBtr0339693|FBtr0339693 11555283|11555283|11555283|11555283|11555283|11555283|11555283|11555283|11555283|11555048|11555048|11555048 11555615|11555615|11555615|11555615|11555615|11555615|11555615|11555615|11555615|11555615|11555615|11555615 X - 11555363 11555431 3'utr CG1572 FlyBase G66670.1 GTTGTACTGTGAAACGTTCTTTGGCGCTAGTTACACTTACTTGTACTTTTACCGATATATACAAAACTT 76 11555411 0.720979119 10 74 590 0.976470588 1.919078092 0.364705882 0.118421053 0.211764706 76 2 0 83 X:11555363-11555431 6 CG1572 FBtr0339694|FBtr0339694|FBtr0339694|FBtr0339693|FBtr0339693|FBtr0339693|FBtr0073544|FBtr0073544|FBtr0073544|FBtr0073543|FBtr0073543|FBtr0073543 11555283|11555283|11555283|11555048|11555048|11555048|11555283|11555283|11555283|11555283|11555283|11555283 11555615|11555615|11555615|11555615|11555615|11555615|11555615|11555615|11555615|11555615|11555615|11555615 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X - 11555387 11555455 3'utr CG1572 FlyBase G50198.1 TGGGTGCCAAGCGGCGGAATCTTTGTTGTACTGTGAAACGTTCTTTGGCGCTAGTTACACTTACTTGTA 55 11555411 0.985647923 8 55 454 1 1.857332496 0.319444444 0.254545455 0.430555556 55 0 0 72 X:11555387-11555455 6 35 5159 FBgn0030309 992.9133333 125.4333333 190.21 0.035249804 0.279032687 0.18400715 -14 -14 -14 0.01 dme-miR-92b-3p 6mer2-7 TGCAAT X 11555560 11555565 - X_11555560_11555565_- 1 1 1 0 CG1572 FBtr0073544|FBtr0073543|FBtr0339694|FBtr0339693 11555283|11555283|11555283|11555048 11555615|11555615|11555615|11555615 X - 11555546 11555584 3'utr CG1572 FlyBase G66671.1 CGGCCATTCAAGTGGAATTTGCAATCTCGAAGCATTTGT 16 11555565 0.882661665 4 16 89 1 1.255272505 0.277777778 0.125 0.222222222 16 0 0 18 X:11555546-11555584 6 CG1572 FBtr0339694|FBtr0339693|FBtr0073544|FBtr0073543 11555283|11555048|11555283|11555283 11555615|11555615|11555615|11555615 TGCAAT 6mer2-7 dme-miR-92b-3p X - 11555534 11555575 3'utr CG1572 FlyBase G50199.1 AAGTGGAATTTGCAATCTCGAAGCATTTGTTCTTCCCACAAC 14 11555565 0.968793623 4 13 71 0.958333333 1.361727836 0.166666667 0.428571429 0.666666667 14 1 0 23 X:11555534-11555575 6 14.5 5160 FBgn0030309 992.9133333 125.4333333 190.21 0.01460349 0.115599256 0.076231534 0 0 0 0.01 dme-miR-14-3p 6mer3-8 AAGACT X 11563120 11563125 - X_11563120_11563125_- 1 1 1 0 RpII215 FBtr0073542 11562798 11563511 X - 11563091 11563164 3'utr RpII215 FlyBase G66678.1 CTTTGCACAACCCACTGTATGAAATTGTTTACTAACTGGAAGACTCTTGTCACTCTTCTGCAAAGTACTTTCAC 22 11563110 0.985400882 12 20 156 0.935483871 1.462397998 0.064516129 0.363636364 0.548387097 22 2 0 29 X:11563091-11563164 6 RpII215 FBtr0073542 11562798 11563511 AAGACT 6mer3-8 dme-miR-14-3p X - 11563091 11563151 3'utr RpII215 FlyBase G50202.1 ACTGTATGAAATTGTTTACTAACTGGAAGACTCTTGTCACTCTTCTGCAAAGTACTTTCAC 9 11563139 0.984892293 7 9 71 1 1.079181246 0.166666667 0.333333333 0.5 9 0 0 12 X:11563091-11563151 6 10 5161 FBgn0003277 4688.79 83.91 128.7166667 0.002132746 0.119175307 0.077690017 -15 14 -0.5 0.01 dme-miR-1006-3p 7mer-A1 GAATTTA X 11563403 11563409 - X_11563403_11563409_- 0.823349562 0.823349562 0.823349562 0 RpII215 FBtr0073542 11562798 11563511 X - 11563361 11563446 3'utr RpII215 FlyBase G66679.1 AGTACCGACTACGCTCGATCGCCCGAACGGGAAAGGTGAATTTAATAATATTATGTTTGTATACAGCAAATAGGTCTCTCATACAA 20 11563431 0.731495266 10 18 84 0.863636364 0.977723605 0.181818182 0.1 0.181818182 20 2 1 19 X:11563361-11563446 7 RpII215 FBtr0073542 11562798 11563511 GAATTTA 7mer-A1 dme-miR-1006-3p X - 11563392 11563480 3'utr RpII215 FlyBase G50204.1 CGTCCCGATCTCCGGGGCGGTCAAGCCGTAGTTAAGTACCGACTACGCTCGATCGCCCGAACGGGAAAGGTGAATTTAATAATATTATG 12 11563405 0.961350344 9 12 60 1 1.301029996 0.15 0.333333333 0.6 12 0 0 20 X:11563392-11563480 7 2 5162 FBgn0003277 4688.79 83.91 128.7166667 0.000426549 0.023835061 0.015538003 22 -4 9 0.01 dme-miR-965-3p 6mer3-8 TACGCT X 11563432 11563437 - X_11563432_11563437_- 1 1 1 0 RpII215 FBtr0073542 11562798 11563511 X - 11563361 11563446 3'utr RpII215 FlyBase G66679.1 AGTACCGACTACGCTCGATCGCCCGAACGGGAAAGGTGAATTTAATAATATTATGTTTGTATACAGCAAATAGGTCTCTCATACAA 20 11563431 0.731495266 10 18 84 0.863636364 0.977723605 0.181818182 0.1 0.181818182 20 2 1 19 X:11563361-11563446 6 RpII215 FBtr0073542 11562798 11563511 TACGCT 6mer3-8 dme-miR-965-3p X - 11563392 11563480 3'utr RpII215 FlyBase G50204.1 CGTCCCGATCTCCGGGGCGGTCAAGCCGTAGTTAAGTACCGACTACGCTCGATCGCCCGAACGGGAAAGGTGAATTTAATAATATTATG 12 11563408 0.961350344 9 12 60 1 1.301029996 0.15 0.333333333 0.6 12 0 0 20 X:11563392-11563480 6 7 5163 FBgn0003277 4688.79 83.91 128.7166667 0.001492922 0.083422715 0.054383012 -6 -29 -17.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG X 11605490 11605495 + X_11605490_11605495_+ 1 1 1 0 rho-4 FBtr0073518|FBtr0073519 11605445|11605445 11606288|11606000 X + 11605469 11605506 3'utr rho-4 FlyBase G60633.1 AGCCCTAACCCTTAACCATGTCCAAAGTGCACTTCGAT 11 11605487 0.673163228 4 9 59 0.916666667 0.740362689 0.166666667 0.090909091 0.166666667 11 0 1 11 X:11605469-11605506 6 rho-4 FBtr0073519|FBtr0073518 11605445|11605445 11606000|11606288 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" X + 11605438 11605524 stop_codon rho-4 FlyBase G45810.1 TACAACTAGCCCCATCACTAGCTCTAGCCCTAGCCCTAACCCTTAACCATGTCCAAAGTGCACTTCGATATTGAGCCGAGGTTGCAG 15 11605487 0.960185433 9 14 66 0.96 1.380211242 0.2 0.6 0.76 15 1 0 24 X:11605438-11605524 6 9 5164 FBgn0030318 1970.58 111.7533333 171.94 0.004567183 0.080534511 0.052343841 3 3 3 0.01 dme-miR-305-3p 7mer-m8 ATGTGCC X 11605560 11605566 + X_11605560_11605566_+ 0.674515655 0.674515655 0.674515655 0 rho-4 FBtr0073518|FBtr0073519 11605445|11605445 11606288|11606000 X + 11605526 11605582 3'utr rho-4 FlyBase G60634.1 ACGCACAGTACTATATATAGGATTTCTTCTGACCATGTGCCTATGCCAGCTGCAAAA 6 11605561 0.977025278 4 6 40 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 X:11605526-11605582 7 rho-4 FBtr0073519|FBtr0073518 11605445|11605445 11606000|11606288 ATGTGCC 7mer-m8 dme-miR-305-3p X + 11605535 11605573 3'utr rho-4 FlyBase G45811.1 ACTATATATAGGATTTCTTCTGACCATGTGCCTATGCCA 8 11605552 0.64287683 3 8 74 1 1.041392685 0.636363636 0.125 0.363636364 8 0 0 11 X:11605535-11605573 7 6.5 5165 FBgn0030318 1970.58 111.7533333 171.94 0.003298521 0.058163813 0.037803885 -1 8 3.5 0.01 dme-miR-14-3p 8mer-A1 AAGACTGA X 11606698 11606705 - X_11606698_11606705_- 0.643565469 0.643565469 0.643565469 0 CG2247 FBtr0306133|FBtr0306135|FBtr0073536|FBtr0306134 11606492|11606492|11606288|11606492 11606782|11606782|11606782|11606782 X - 11606667 11606774 3'utr CG2247 FlyBase G66713.1 AACGCACTAGTTATTCCTAGGTGCCATAAGTTAGCTCATATATAAGCCCTCCCAGTAGCAGAGAATGCCAAGACTGAGTCTTCTCGAGAAGCATCACCTCCGAACACC 118 11606709 0.874134005 12 98 581 0.810218978 1.568201724 0.160583942 0.144067797 0.262773723 118 24 2 111 X:11606667-11606774 8 CG2247 FBtr0073536|FBtr0306134|FBtr0306133|FBtr0306135 11606288|11606492|11606492|11606492 11606782|11606782|11606782|11606782 AAGACTGA 8mer-A1 dme-miR-14-3p X - 11606680 11606735 3'utr CG2247 FlyBase G50238.1 ATATAAGCCCTCCCAGTAGCAGAGAATGCCAAGACTGAGTCTTCTCGAGAAGCATC 81 11606709 0.875378357 6 60 402 0.736 1.486666573 0.152 0.395061728 0.608 81 31 2 92 X:11606680-11606735 8 89.5 5166 FBgn0030320 921.3333333 30.09666667 46.31666667 0.097141823 2.973751246 1.932349766 4 4 4 0.01 dme-miR-308-3p 7mer-m1 TGTGATT X 11619662 11619668 + X_11619662_11619668_+ 0.521223855 0.521223855 0.521223855 0 Met FBtr0073521|FBtr0343585 11619086|11619086 11619948|11621280 X + 11619639 11619685 3'utr Met FlyBase G60658.1 ATTTGGCCATTACTGTTTCTGTGTGTGATTTCGGTATAAAATAGTAG 36 11619668 0.777012262 7 35 385 0.975609756 1.301029996 0.317073171 0.111111111 0.219512195 36 0 1 40 X:11619639-11619685 7 Met FBtr0073521|FBtr0343585 11619086|11619086 11619948|11621280 TGTGATT 7mer-m1 dme-miR-308-3p X + 11619647 11619709 3'utr Met FlyBase G45822.1 ATTACTGTTTCTGTGTGTGATTTCGGTATAAAATAGTAGTTTGATTACATGTTATATTGATGA 27 11619668 0.990764224 6 26 280 1 1.612783857 0.219512195 0.296296296 0.536585366 27 0 0 41 X:11619647-11619709 7 29 5167 FBgn0002723 512 15.22666667 23.33666667 0.056640625 1.904553415 1.242679617 -6 -6 -6 0.01 dme-miR-318-3p 6mer3-8 CCCAGT X 11619903 11619908 + X_11619903_11619908_+ 1 1 1 0 Met FBtr0073521|FBtr0343585 11619086|11619086 11619948|11621280 X + 11619890 11619933 3'utr Met FlyBase G60661.1 ATTTCCCCGATTTCCCAGTTATCACCTTCCGCCCCAAAACACCA 137 11619916 0.945961181 3 133 662 0.973684211 1.86923172 0 0.094890511 0.184210526 137 3 1 148 X:11619890-11619933 6 Met FBtr0073521|FBtr0343585 11619086|11619086 11619948|11621280 CCCAGT 6mer3-8 dme-miR-318-3p X + 11619878 11619933 3'utr Met FlyBase G45824.1 AATTTAAACCCCATTTCCCCGATTTCCCAGTTATCACCTTCCGCCCCAAAACACCA 64 11619916 0.959037646 4 60 299 0.935483871 1.161368002 0 0.359375 0.559139785 64 1 5 87 X:11619878-11619933 6 90 5168 FBgn0002723 512 15.22666667 23.33666667 0.17578125 5.910683012 3.856591915 -13 -13 -13 0.01 dme-miR-79-3p 7mer-A1 AGCTTTA X 11620312 11620318 + X_11620312_11620318_+ 0.823349562 0.823349562 0.823349562 0 Met FBtr0343585 11619086 11621280 X + 11620282 11620327 3'utr Met FlyBase G60662.1 TTTGTAATCTATAAAAACACTTCCAGGCGCAGCTTTATTTTTCAAC 14 11620316 0.974252173 3 14 91 1 1.204119983 0 0.142857143 0.25 14 0 0 16 X:11620282-11620327 7 Met FBtr0343585 11619086 11621280 AGCTTTA 7mer-A1 dme-miR-79-3p X + 11620290 11620327 3'utr Met FlyBase G45825.1 CTATAAAAACACTTCCAGGCGCAGCTTTATTTTTCAAC 17 11620316 0.731283777 2 16 113 0.964285714 1.431363764 0 0.411764706 0.642857143 17 1 0 27 X:11620290-11620327 7 15 5169 FBgn0002723 512 15.22666667 23.33666667 0.029296875 0.985113835 0.642765319 -4 -4 -4 0.01 dme-miR-12-5p 8mer-A1 AATACTCA X 11620582 11620589 + X_11620582_11620589_+ 0.643927113 0.643927113 0.643927113 0 Met FBtr0343585 11619086 11621280 X + 11620547 11620587 3'utr Met FlyBase G60663.1 TTGAAGTTCGTACTAGCGAAGTTTGGCTGTAGTTCAATACT 15 11620570 0.968892651 2 15 116 1 1.230448921 0 0.133333333 0.235294118 15 0 0 17 X:11620547-11620587 6 Met FBtr0343585 11619086 11621280 AATACTCA 8mer-A1 dme-miR-12-5p X + 11620549 11620584 3'utr Met FlyBase G45826.1 GAAGTTCGTACTAGCGAAGTTTGGCTGTAGTTCAAT 12 11620570 0.850989014 3 12 88 1 1.204119983 0 0.25 0.4375 12 0 0 16 X:11620549-11620584 3 4.5 5170 FBgn0002723 512 15.22666667 23.33666667 0.008789063 0.295534151 0.192829596 12 12 12 0.01 dme-miR-980-3p 6mer3-8 GGCAGC X 11693663 11693668 + X_11693663_11693668_+ 1 1 1 0 bif FBtr0334464|FBtr0073527|FBtr0334465 11689550|11692808|11691412 11694740|11694740|11694740 X + 11693641 11693804 3'utr bif FlyBase G60701.1 CAGCAGCAGTGGGAGCAGCAATGGCAGCCACAGTCCAGGCAGCAACGGGAGCAGTCCAGCCGGAGCTGCGGGCAGCCGGTTGATGTTCAACGGGAATGGCAGCATTATGGGCATCGGCGAGGGACTGATCAAGGAGGGCGACTTGGCGGCAACGGAAGCAGGAC 63 11693662 0.999821232 13 60 180 0.96 1.857332496 0.373333333 0.126984127 0.266666667 63 3 0 72 X:11693641-11693804 6 bif FBtr0334465|FBtr0334464|FBtr0073527 11691412|11689550|11692808 11694740|11694740|11694740 GGCAGC 6mer3-8 dme-miR-980-3p X + 11693642 11693856 3'utr bif FlyBase G45853.1 AGCAGCAGTGGGAGCAGCAATGGCAGCCACAGTCCAGGCAGCAACGGGAGCAGTCCAGCCGGAGCTGCGGGCAGCCGGTTGATGTTCAACGGGAATGGCAGCATTATGGGCATCGGCGAGGGACTGATCAAGGAGGGCGACTTGGCGGCAACGGAAGCAGGACCTGGAACTGCAGATGGAGCAGGTGCCTCCAAGAAGGGTTCAGCTGTGGACGA 39 11693662 0.952141623 16 37 108 0.950819672 1.763427994 0.393442623 0.333333333 0.573770492 39 3 0 58 X:11693642-11693856 6 13 5171 FBgn0014133 2033.663333 48.19333333 73.77666667 0.006392405 0.269746853 0.176207473 1 1 1 0.01 dme-miR-980-3p 6mer3-8 GGCAGC X 11693738 11693743 + X_11693738_11693743_+ 1 1 1 0 bif FBtr0334464|FBtr0073527|FBtr0334465 11689550|11692808|11691412 11694740|11694740|11694740 X + 11693641 11693804 3'utr bif FlyBase G60701.1 CAGCAGCAGTGGGAGCAGCAATGGCAGCCACAGTCCAGGCAGCAACGGGAGCAGTCCAGCCGGAGCTGCGGGCAGCCGGTTGATGTTCAACGGGAATGGCAGCATTATGGGCATCGGCGAGGGACTGATCAAGGAGGGCGACTTGGCGGCAACGGAAGCAGGAC 63 11693737 0.999821232 13 60 180 0.96 1.857332496 0.373333333 0.126984127 0.266666667 63 3 0 72 X:11693641-11693804 6 bif FBtr0334465|FBtr0334464|FBtr0073527 11691412|11689550|11692808 11694740|11694740|11694740 GGCAGC 6mer3-8 dme-miR-980-3p X + 11693642 11693856 3'utr bif FlyBase G45853.1 AGCAGCAGTGGGAGCAGCAATGGCAGCCACAGTCCAGGCAGCAACGGGAGCAGTCCAGCCGGAGCTGCGGGCAGCCGGTTGATGTTCAACGGGAATGGCAGCATTATGGGCATCGGCGAGGGACTGATCAAGGAGGGCGACTTGGCGGCAACGGAAGCAGGACCTGGAACTGCAGATGGAGCAGGTGCCTCCAAGAAGGGTTCAGCTGTGGACGA 39 11693737 0.952141623 16 37 108 0.950819672 1.763427994 0.393442623 0.333333333 0.573770492 39 3 0 58 X:11693642-11693856 6 18 5172 FBgn0014133 2033.663333 48.19333333 73.77666667 0.008851023 0.373495643 0.243979578 1 1 1 0.01 dme-miR-980-5p 6mer2-7 AAAAAC X 11693955 11693960 + X_11693955_11693960_+ 1 1 1 0 bif FBtr0334464|FBtr0073527|FBtr0334463|FBtr0334465|FBtr0073526 11689550|11692808|11693937|11691412|11693937 11694740|11694740|11694740|11694740|11694740 X + 11693922 11693999 stop_codon bif FlyBase G60702.1 CGGATTTGCTATATTAGGTCGTCCTGCCAGCCAAAAAACCGGAGCGTCTAGCTCTTTTTCTACCGGTTTCCACCAAAC 11 11693945 0.975606713 7 11 71 1 1.113943352 0.153846154 0.181818182 0.307692308 11 0 0 13 X:11693922-11693999 6 bif FBtr0073526|FBtr0334463|FBtr0334465|FBtr0334464|FBtr0073527 11693937|11693937|11691412|11689550|11692808 11694740|11694740|11694740|11694740|11694740 AAAAAC 6mer2-7 dme-miR-980-5p X + 11693923 11693979 stop_codon bif FlyBase G45854.1 GGATTTGCTATATTAGGTCGTCCTGCCAGCCAAAAAACCGGAGCGTCTAGCTCTTTT 14 11693945 0.916551585 8 13 66 1 1.361727836 0 0.357142857 0.608695652 14 0 0 23 X:11693923-11693979 6 7.5 5173 FBgn0014133 2033.663333 48.19333333 73.77666667 0.003687926 0.155623184 0.101658158 10 10 10 0.01 dme-miR-283-5p 7mer-A1 GATATTA X 11694185 11694191 + X_11694185_11694191_+ 0.782911824 0.782911824 0.782911824 0 bif FBtr0334464|FBtr0073527|FBtr0334463|FBtr0334465|FBtr0073526 11689550|11692808|11693937|11691412|11693937 11694740|11694740|11694740|11694740|11694740 X + 11694160 11694201 3'utr bif FlyBase G60704.1 ATCCATAAAGATACGTATATAAATAGATATTATTTGTAAGTT 10 11694179 0.960828471 4 9 100 0.923076923 1.079181246 0.230769231 0.2 0.384615385 10 1 0 12 X:11694160-11694201 7 bif FBtr0073526|FBtr0334463|FBtr0334465|FBtr0334464|FBtr0073527 11693937|11693937|11691412|11689550|11692808 11694740|11694740|11694740|11694740|11694740 GATATTA 7mer-A1 dme-miR-283-5p X + 11694127 11694193 3'utr bif FlyBase G45856.1 CAACAAGGCAACGTAAACCAAGTATGGCAAGAAATCCATAAAGATACGTATATAAATAGATATTATT 11 11694179 0.948387318 7 10 45 0.909090909 0.698970004 0.090909091 0 0 11 0 1 10 X:11694127-11694193 7 6 5174 FBgn0014133 2033.663333 48.19333333 73.77666667 0.002950341 0.124498548 0.081326526 6 6 6 0.01 dme-miR-305-5p 6mer2-7 GTACAA X 11694230 11694235 + X_11694230_11694235_+ 1 1 1 0 bif FBtr0334464|FBtr0073527|FBtr0334463|FBtr0334465|FBtr0073526 11689550|11692808|11693937|11691412|11693937 11694740|11694740|11694740|11694740|11694740 X + 11694210 11694265 3'utr bif FlyBase G60705.1 TAGAGATCCGATGTGTATGTGTACAACAGCAAGCGTGTGTGTCTGTCTTCTTTATA 38 11694228 0.650923563 11 36 280 0.934782609 1.633468456 0.130434783 0.210526316 0.347826087 38 3 0 43 X:11694210-11694265 6 bif FBtr0073526|FBtr0334463|FBtr0334465|FBtr0334464|FBtr0073527 11693937|11693937|11691412|11689550|11692808 11694740|11694740|11694740|11694740|11694740 GTACAA 6mer2-7 dme-miR-305-5p X + 11694212 11694263 3'utr bif FlyBase G45857.1 GAGATCCGATGTGTATGTGTACAACAGCAAGCGTGTGTGTCTGTCTTCTTTA 15 11694252 0.693989373 7 13 107 0.92 1.06069784 0.12 0.4 0.64 15 1 1 23 X:11694212-11694263 6 10 5175 FBgn0014133 2033.663333 48.19333333 73.77666667 0.004917235 0.207497579 0.13554421 2 -22 -10 0.01 dme-miR-7-5p 6mer3-8 GTCTTC X 11694254 11694259 + X_11694254_11694259_+ 1 1 1 0 bif FBtr0334464|FBtr0073527|FBtr0334463|FBtr0334465|FBtr0073526 11689550|11692808|11693937|11691412|11693937 11694740|11694740|11694740|11694740|11694740 X + 11694210 11694265 3'utr bif FlyBase G60705.1 TAGAGATCCGATGTGTATGTGTACAACAGCAAGCGTGTGTGTCTGTCTTCTTTATA 38 11694228 0.650923563 11 36 280 0.934782609 1.633468456 0.130434783 0.210526316 0.347826087 38 3 0 43 X:11694210-11694265 6 bif FBtr0073526|FBtr0334463|FBtr0334465|FBtr0334464|FBtr0073527 11693937|11693937|11691412|11689550|11692808 11694740|11694740|11694740|11694740|11694740 GTCTTC 6mer3-8 dme-miR-7-5p X + 11694212 11694263 3'utr bif FlyBase G45857.1 GAGATCCGATGTGTATGTGTACAACAGCAAGCGTGTGTGTCTGTCTTCTTTA 15 11694252 0.693989373 7 13 107 0.92 1.06069784 0.12 0.4 0.64 15 1 1 23 X:11694212-11694263 6 8 5176 FBgn0014133 2033.663333 48.19333333 73.77666667 0.003933788 0.165998063 0.108435368 26 2 14 0.01 dme-miR-308-3p 7mer-m1 TGTGATT X 11704012 11704018 + X_11704012_11704018_+ 0.521223855 0.521223855 0.521223855 0 PhKgamma FBtr0301501|FBtr0301500|FBtr0090002|FBtr0343587|FBtr0343648 11703642|11703642|11703642|11703642|11703642 11704394|11704394|11704394|11704394|11704394 X + 11703983 11704039 3'utr PhKgamma FlyBase G60721.1 AACATTACCTCCCCTGCCTTCTTCGTCCTTGTGATTTTGTTTAATACTTTTTAATTC 99 11704018 0.686928454 10 94 1183 0.938596491 1.427323786 0.263157895 0.111111111 0.228070175 99 4 3 107 X:11703983-11704039 7 PhKgamma FBtr0343648|FBtr0343587|FBtr0090002|FBtr0301500|FBtr0301501 11703642|11703642|11703642|11703642|11703642 11704394|11704394|11704394|11704394|11704394 TGTGATT 7mer-m1 dme-miR-308-3p X + 11703984 11704030 3'utr PhKgamma FlyBase G45868.1 ACATTACCTCCCCTGCCTTCTTCGTCCTTGTGATTTTGTTTAATACT 85 11704018 0.660804767 12 84 982 0.991935484 1.788875116 0.282258065 0.294117647 0.516129032 85 0 1 123 X:11703984-11704030 7 82 5177 FBgn0011754 327.82 14.47333333 22.3 0.25013727 5.665591893 3.677130045 -6 -6 -6 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT X 11704070 11704075 + X_11704070_11704075_+ 1 1 1 0 PhKgamma FBtr0301501|FBtr0301500|FBtr0090002|FBtr0343587|FBtr0343648 11703642|11703642|11703642|11703642|11703642 11704394|11704394|11704394|11704394|11704394 X + 11704043 11704120 3'utr PhKgamma FlyBase G60722.1 TTTATTGCGTCTAATGCGCGCCAGCCATCTAGTGTAATCAGTTAGTGTAGTGAATGTAGCGTTCAACCACGGCCATGC 12 11704056 0.980118214 7 10 71 0.882352941 1.176091259 0 0.333333333 0.529411765 12 2 0 15 X:11704043-11704120 6 PhKgamma FBtr0343648|FBtr0343587|FBtr0090002|FBtr0301500|FBtr0301501 11703642|11703642|11703642|11703642|11703642 11704394|11704394|11704394|11704394|11704394 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" X + 11704045 11704120 3'utr PhKgamma FlyBase G45869.1 TATTGCGTCTAATGCGCGCCAGCCATCTAGTGTAATCAGTTAGTGTAGTGAATGTAGCGTTCAACCACGGCCATGC 12 11704070 0.956181651 7 12 59 1 1.361727836 0.260869565 0.75 0.869565217 12 0 0 23 X:11704045-11704120 6 5 5178 FBgn0011754 327.82 14.47333333 22.3 0.015252273 0.34546292 0.224215247 14 0 7 0.01 dme-miR-184-5p 7mer-m8 TGATAAG X 11719788 11719794 + X_11719788_11719794_+ 0.658999343 0.658999343 0.658999343 0 prtp FBtr0332954|FBtr0303335|FBtr0303334|FBtr0073551 11719487|11719487|11719487|11719487 11719894|11719894|11719894|11719894 X + 11719746 11719809 3'utr prtp FlyBase G60733.1 GTTTAGTGTTTACGTAAATGGGGCACGGGACTGTGTGCGCGATGATAAGCCATTTAGCGAACTT 10 11719764 0.922568538 6 10 43 1 1.041392685 0.636363636 0.1 0.181818182 10 0 0 11 X:11719746-11719809 7 prtp FBtr0332954|FBtr0303335|FBtr0303334|FBtr0073551 11719487|11719487|11719487|11719487 11719894|11719894|11719894|11719894 TGATAAG 7mer-m8 dme-miR-184-5p X + 11719749 11719804 3'utr prtp FlyBase G45874.1 TAGTGTTTACGTAAATGGGGCACGGGACTGTGTGCGCGATGATAAGCCATTTAGCG 10 11719780 0.930254692 5 10 39 1 1.230448921 0.352941176 0.5 0.705882353 10 0 0 17 X:11719749-11719804 7 3 5179 FBgn0030329 624.6666667 43.55666667 66.86666667 0.004802561 0.068875794 0.044865404 24 8 16 0.01 dme-miR-33-5p 6mer3-8 CAATGC X 11722937 11722942 + X_11722937_11722942_+ 1 1 1 0 Tango10 FBtr0073553|FBtr0332955|FBtr0073552 11722787|11722787|11722787 11723854|11723854|11723854 X + 11722930 11722988 3'utr Tango10 FlyBase G60746.1 AAAAATCCAATGCGACTGCGAATCCCATGGGCTCAACCTTTGCGATCTTAACTGGCGGT 33 11722957 0.7918309 8 32 157 0.975 1.290034611 0.025 0.151515152 0.3 33 0 1 39 X:11722930-11722988 6 Tango10 FBtr0073552|FBtr0332955|FBtr0073553 11722787|11722787|11722787 11723854|11723854|11723854 CAATGC 6mer3-8 dme-miR-33-5p X + 11722882 11722992 3'utr Tango10 FlyBase G45883.1 ACAGCCACCACTGTATTTCAAACTACCATTTAACATGTGTATGTATGTAAAAATCCAATGCGACTGCGAATCCCATGGGCTCAACCTTTGCGATCTTAACTGGCGGTCTAC 43 11722957 0.959481509 11 40 229 0.926470588 1.322219295 0.014705882 0.395348837 0.617647059 43 3 2 63 X:11722882-11722992 6 13.5 5180 FBgn0030330 148.3733333 5.923333333 9.083333333 0.0909867 2.279122116 1.486238532 -20 -20 -20 0.01 dme-miR-14-3p 7mer-A1 AGACTGA X 11723711 11723717 + X_11723711_11723717_+ 0.823349562 0.823349562 0.823349562 0 Tango10 FBtr0073553|FBtr0332955|FBtr0073552 11722787|11722787|11722787 11723854|11723854|11723854 X + 11723634 11723779 3'utr Tango10 FlyBase G60749.1 TTGGCGTTAATGTAGTTGTTAAATAAAATGTCTCTTCAAAAATCAGCTGTGGTCTATTATTATTATGCGTTTTCATTAGACTGAACTAAAGAGTGTAGAATTACTGTCATTTAACGATATAATTTAGTGATTTCGGTTTTAATTAA 522 11723709 0.914210113 25 504 4182 0.968944099 1.95008655 0.046583851 0.185823755 0.340062112 522 14 6 624 X:11723634-11723779 7 Tango10 FBtr0073552|FBtr0332955|FBtr0073553 11722787|11722787|11722787 11723854|11723854|11723854 AGACTGA 7mer-A1 dme-miR-14-3p X + 11723657 11723821 3'utr Tango10 FlyBase G45886.1 TAAAATGTCTCTTCAAAAATCAGCTGTGGTCTATTATTATTATGCGTTTTCATTAGACTGAACTAAAGAGTGTAGAATTACTGTCATTTAACGATATAATTTAGTGATTTCGGTTTTAATTAAATTATTGCCTAACGTTGACCAGTCATTTTGTAAAATAACGTC 395 11723709 0.892218729 20 384 2984 0.976950355 1.963000348 0.044326241 0.293670886 0.505319149 395 8 5 551 X:11723657-11723821 7 378 5181 FBgn0030330 148.3733333 5.923333333 9.083333333 2.547627606 63.81541925 41.6146789 2 2 2 0.01 dme-miR-308-3p 7mer-m1 TGTGATT X 11763492 11763498 - X_11763492_11763498_- 0.443131018 0.443131018 0.443131018 0 CG9360 FBtr0073613 11763472 11763643 X - 11763483 11763513 3'utr CG9360 FlyBase G66763.1 ATGTACCAAACGTTATGTGATTAAAATTCTT 25 11763501 0.694579367 4 22 174 0.884615385 1.361727836 0.115384615 0.04 0.076923077 25 3 0 23 X:11763483-11763513 7 CG9360 FBtr0073613 11763472 11763643 TGTGATT 7mer-m1 dme-miR-308-3p X - 11763483 11763516 3'utr CG9360 FlyBase G50276.1 TGCATGTACCAAACGTTATGTGATTAAAATTCTT 15 11763501 0.700413501 3 15 110 1 1.361727836 0.086956522 0.466666667 0.652173913 15 0 0 23 X:11763483-11763516 7 19.5 5182 FBgn0030332 279 33.07666667 49.99 0.069892473 0.589539454 0.390078016 3 3 3 0.01 dme-miR-980-3p 6mer3-8 GGCAGC X 11796942 11796947 + X_11796942_11796947_+ 0.99999999 1 0.999999995 0 CkIIbeta FBtr0073558|FBtr0307896|FBtr0333204 11795608|11795608|11796668 11797924|11797301|11797565 X + 11796910 11796973 5'utr CkIIbeta FlyBase G60768.1 AAGGATGTGGATCGAAGAAGAGGATGAAGATTGGCAGCAGGACACGAGCAACGAACCGAACGAA 50 11796941 0.786101956 3 49 97 0.949152542 1.748188027 0.186440678 0.16 0.288135593 50 3 0 56 X:11796910-11796973 6 CkIIbeta FBtr0333204|FBtr0073558|FBtr0307896 11796668|11795608|11795608 11797565|11797924|11797301 GGCAGC 6mer3-8 dme-miR-980-3p X + 11796918 11796969 5'utr CkIIbeta FlyBase G45906.1 GGATCGAAGAAGAGGATGAAGATTGGCAGCAGGACACGAGCAACGAACCGAA 36 11796941 0.785545432 3 35 64 0.982142857 1.740362689 0.196428571 0.388888889 0.607142857 36 1 0 55 X:11796918-11796969 6 43 5183 FBgn0000259 3146.093333 305.1066667 469.0433333 0.013667745 0.140934318 0.091675965 1 1 1 0.01 dme-miR-277-3p 6mer2-7 GCATTT X 11802198 11802203 - X_11802198_11802203_- 0.999263939 0.999988616 0.999626277 0.00051244 Hsc70-3 FBtr0073609|FBtr0345166|FBtr0073608|FBtr0073610|FBtr0073611 11801694|11801694|11801694|11801694|11801694 11802612|11802612|11802612|11802612|11802612 X - 11802136 11802292 3'utr Hsc70-3 FlyBase G66767.2 TTTTTTTCTACACTTAAATTTAAAGTATTTTTTTTTTTGTCGGCAAAAAATATGAGAGAATGTAATAACGATTTATTCGAGTGTTCCTCGCATTTCTCACGCCCTTCCGCCCACTTCCCTCACGTTAGCTGCATAATTATGTAAAACTGTAAATTTT 376 11802188 0.94397716 23 364 2389 0.967517401 2.018076064 0.069605568 0.125 0.236658933 376 11 3 417 X:11802136-11802292 6 Hsc70-3 FBtr0073610|FBtr0073608|FBtr0345166|FBtr0073609|FBtr0073611 11801694|11801694|11801694|11801694|11801694 11802612|11802612|11802612|11802612|11802612 GCATTT 6mer2-7 dme-miR-277-3p X - 11802138 11802248 3'utr Hsc70-3 FlyBase G50280.1 AAAAAATATGAGAGAATGTAATAACGATTTATTCGAGTGTTCCTCGCATTTCTCACGCCCTTCCGCCCACTTCCCTCACGTTAGCTGCATAATTATGTAAAACTGTAAATT 179 11802188 0.853164823 16 176 1120 0.984848485 2.113943352 0.064393939 0.335195531 0.549242424 179 3 1 260 X:11802138-11802248 6 142.5 5184 FBgn0001218 13055.07 506.7333333 774.0533333 0.0109153 0.281212998 0.184095842 -15 -15 -15 0.01 dme-miR-986-5p 6mer3-8 ATTCGA X 11802384 11802389 - X_11802384_11802389_- 1 1 1 0 Hsc70-3 FBtr0073609|FBtr0345166|FBtr0073608|FBtr0073610|FBtr0073611 11801694|11801694|11801694|11801694|11801694 11802612|11802612|11802612|11802612|11802612 X - 11802379 11802445 3'utr Hsc70-3 FlyBase G66769.1 TCACAACAGCAAAAGATAATACTACTTTACAGCCCTCAGCAGCCATCCCCCCATCCATTCGACCTTT 67 11802400 0.894333443 7 58 267 0.881578947 1.224014811 0.052631579 0.104477612 0.210526316 67 6 3 67 X:11802379-11802445 6 Hsc70-3 FBtr0073610|FBtr0073608|FBtr0345166|FBtr0073609|FBtr0073611 11801694|11801694|11801694|11801694|11801694 11802612|11802612|11802612|11802612|11802612 ATTCGA 6mer3-8 dme-miR-986-5p X - 11802378 11802435 3'utr Hsc70-3 FlyBase G50281.2 AAAAGATAATACTACTTTACAGCCCTCAGCAGCCATCCCCCCATCCATTCGACCTTTA 39 11802400 0.906572937 5 34 149 0.88 1.342422681 0.06 0.230769231 0.4 39 5 1 44 X:11802378-11802435 6 33 5185 FBgn0001218 13055.07 506.7333333 774.0533333 0.002527754 0.06512301 0.042632721 11 11 11 0.01 dme-miR-14-3p 7mer-A1 AGACTGA X 11802532 11802538 - X_11802532_11802538_- 0.823344475 0.821611247 0.822477861 0.001225628 Hsc70-3 FBtr0073609|FBtr0345166|FBtr0073608|FBtr0073610|FBtr0073611 11801694|11801694|11801694|11801694|11801694 11802612|11802612|11802612|11802612|11802612 X - 11802480 11802597 3'utr Hsc70-3 FlyBase G66770.1 CTCACATAACTTACACACAGCCCAGCCTGCATCCATTCGAGATCATAGTGTTGGAATTCAGACTGAAAAAAAAAACAATTATAACTTAATTGCAAACGCAGTAGCCACAACAACAACA 1692 11802541 0.962294804 18 1612 8797 0.951461119 1.792165671 0.326399208 0.153664303 0.290737989 1692 68 30 1921 X:11802480-11802597 7 Hsc70-3 FBtr0073610|FBtr0073608|FBtr0345166|FBtr0073609|FBtr0073611 11801694|11801694|11801694|11801694|11801694 11802612|11802612|11802612|11802612|11802612 AGACTGA 7mer-A1 dme-miR-14-3p X - 11802483 11802602 3'utr Hsc70-3 FlyBase G50282.1 CCCCCCTCACATAACTTACACACAGCCCAGCCTGCATCCATTCGAGATCATAGTGTTGGAATTCAGACTGAAAAAAAAAACAATTATAACTTAATTGCAAACGCAGTAGCCACAACAACA 1303 11802541 0.815950152 19 1256 6595 0.961621622 1.818812184 0.318918919 0.324635457 0.524324324 1303 45 26 1779 X:11802483-11802602 7 1440 5186 FBgn0001218 13055.07 506.7333333 774.0533333 0.110301975 2.841731351 1.860336928 3 3 3 0.01 dme-miR-278-3p 6mer2-7 CCACCG X 11809834 11809839 - X_11809834_11809839_- 1 1 1 0 CG1578 FBtr0073607|FBtr0345160|FBtr0339749 11809353|11809353|11808504 11809930|11809930|11809930 X - 11809817 11809868 3'utr CG1578 FlyBase G66785.1 ATGGAGGAAAATGATGAAACAATTTGCTGCCACCGCACCAAGCAGAACACAG 195 11809846 0.942589906 4 192 775 0.977973568 2.346352974 0.387665198 0.133333333 0.255506608 195 5 0 222 X:11809817-11809868 6 CG1578 FBtr0339749|FBtr0073607|FBtr0345160 11808504|11809353|11809353 11809930|11809930|11809930 CCACCG 6mer2-7 dme-miR-278-3p X - 11809813 11809875 3'utr CG1578 FlyBase G50297.1 GGATGATATGGAGGAAAATGATGAAACAATTTGCTGCCACCGCACCAAGCAGAACACAGAATA 142 11809846 0.944283925 4 141 580 0.990338164 1.834632606 0.425120773 0.338028169 0.54589372 142 0 2 205 X:11809813-11809875 6 166 5187 FBgn0030336 660.9566667 18.89 28.92 0.251151109 8.78771837 5.739972337 7 7 7 0.01 dme-miR-308-3p 7mer-m1 TGTGATT X 11833432 11833438 + X_11833432_11833438_+ 0.521223855 0.521223855 0.521223855 0 rudhira FBtr0305606 11832923 11834386 X + 11833402 11833456 3'utr rudhira FlyBase G60795.1 AAAACAAAACACAAAACTCTGCAAAAAAATTGTGATTTATCGAAAAGAAAAACAA 157 11833431 0.97909335 6 154 1074 0.985294118 1.826074803 0.200980392 0.248407643 0.421568627 157 1 2 201 X:11833402-11833456 7 rudhira FBtr0305606 11832923 11834386 TGTGATT 7mer-m1 dme-miR-308-3p X + 11833406 11833453 3'utr rudhira FlyBase G45916.1 CAAAACACAAAACTCTGCAAAAAAATTGTGATTTATCGAAAAGAAAAA 102 11833432 0.779517959 4 97 694 0.958333333 1.537819095 0.222222222 0.323529412 0.520833333 102 3 3 138 X:11833406-11833453 7 128.5 5188 FBgn0266019 2080.863333 30.08666667 46.56 0.061753215 4.270994904 2.759879725 1 0 0.5 0.01 dme-miR-980-3p 7mer-A1 GCAGCTA X 11833902 11833908 + X_11833902_11833908_+ 0.823349562 0.823349562 0.823349562 0 rudhira FBtr0305606 11832923 11834386 X + 11833883 11833934 3'utr rudhira FlyBase G60798.1 CACACACACACACACACATGCAGCTAAAGCTGTTTGCAGAACACACAGTTGG 19 11833901 0.997671864 3 19 32 1 1.322219295 0.523809524 0.105263158 0.19047619 19 0 0 21 X:11833883-11833934 7 rudhira FBtr0305606 11832923 11834386 GCAGCTA 7mer-A1 dme-miR-980-3p X + 11833886 11833927 3'utr rudhira FlyBase G45918.1 ACACACACACACACATGCAGCTAAAGCTGTTTGCAGAACACA 15 11833901 0.998622171 4 15 38 1 1.361727836 0.260869565 0.466666667 0.652173913 15 0 0 23 X:11833886-11833927 7 13.5 5189 FBgn0266019 2080.863333 30.08666667 46.56 0.006487692 0.448703745 0.289948454 1 1 1 0.01 dme-miR-305-3p 6mer3-8 ATGTGC X 11835318 11835323 + X_11835318_11835323_+ 0.967480504 1 0.983740252 0.022994759 rudhira FBtr0305605|FBtr0333015|FBtr0305603 11835262|11835262|11835262 11837460|11835726|11835726 X + 11835319 11835349 3'utr rudhira FlyBase G60803.1 TGTGCGCCCAGCTCTTTAGTGCGCGCGCTGG 5 11835334 0.638879471 2 4 24 1 0.77815125 0.5 0.2 0.333333333 5 0 0 6 X:11835319-11835349 4 rudhira FBtr0305605|FBtr0305603|FBtr0333015 11835262|11835262|11835262 11837460|11835726|11835726 ATGTGC 6mer3-8 dme-miR-305-3p X + 11835319 11835348 3'utr rudhira FlyBase G45921.1 TGTGCGCCCAGCTCTTTAGTGCGCGCGCTG 5 11835336 0.898456793 3 5 26 1 0.954242509 0.888888889 0.6 0.777777778 5 0 0 9 X:11835319-11835348 4 3 5190 FBgn0266019 2080.863333 30.08666667 46.56 0.001441709 0.099711943 0.06443299 -16 -18 -17 0.01 dme-miR-1002-5p 7mer-m8 CTACTTA X 11836035 11836041 + X_11836035_11836041_+ 0.587852173 0.592355563 0.590103868 0.003184385 rudhira FBtr0305605 11835262 11837460 X + 11836011 11836083 3'utr rudhira FlyBase G60808.1 TATGTAATAGCATAATAGCTCCATCTACTTACCCTAGACTAAAGAAGCCCAAATTTCGCTTATTTTTCCAACT 20 11836064 0.983612219 7 17 133 0.875 0.84509804 0.083333333 0.15 0.291666667 20 1 2 21 X:11836011-11836083 7 rudhira FBtr0305605 11835262 11837460 CTACTTA 7mer-m8 dme-miR-1002-5p X + 11836031 11836066 3'utr rudhira FlyBase G45925.1 CCATCTACTTACCCTAGACTAAAGAAGCCCAAATTT 6 11836035 0.869792899 4 5 28 0.909090909 0.698970004 0.272727273 0.5 0.727272727 6 0 1 10 X:11836031-11836066 7 8 5191 FBgn0266019 2080.863333 30.08666667 46.56 0.003844558 0.265898515 0.171821306 -29 0 -14.5 0.01 dme-bantam-3p 6mer3-8 TGATCT X 11836603 11836608 + X_11836603_11836608_+ 1 1 1 0 rudhira FBtr0305605 11835262 11837460 X + 11836573 11836635 3'utr rudhira FlyBase G60811.1 TATATATATTTTTTTATAAACGTTGAACGATGATCTACACATTTATATATTATAGATGAGCAT 27 11836603 0.889810243 2 25 200 0.939393939 1.491361694 0 0.222222222 0.363636364 27 2 0 31 X:11836573-11836635 6 rudhira FBtr0305605 11835262 11837460 TGATCT 6mer3-8 dme-bantam-3p X + 11836590 11836640 3'utr rudhira FlyBase G45926.1 AAACGTTGAACGATGATCTACACATTTATATATTATAGATGAGCATACTAA 22 11836603 0.909966578 4 21 137 1 1.431363764 0.148148148 0.181818182 0.333333333 22 0 0 27 X:11836590-11836640 6 23 5192 FBgn0266019 2080.863333 30.08666667 46.56 0.011053105 0.764458232 0.493986254 0 0 0 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA X 11837104 11837110 + X_11837104_11837110_+ 0.808818836 0.808818836 0.808818836 0 rudhira FBtr0305605|FBtr0305605 11835262|11835262 11837460|11837460 X + 11837072 11837130 3'utr rudhira FlyBase G60815.1 AGACATATAGATACGCAAATTGGCAGAACATTTACTTAAAACCCATACCTAAATATATG 26 11837102 0.795662072 6 25 150 0.965517241 1.146128036 0.068965517 0.115384615 0.206896552 26 0 1 28 X:11837072-11837130 7 rudhira FBtr0305605|FBtr0305605 11835262|11835262 11837460|11837460 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" X + 11837080 11837118 3'utr rudhira FlyBase G45929.1 AGATACGCAAATTGGCAGAACATTTACTTAAAACCCATA 10 11837102 0.910907485 3 10 49 1 1.146128036 0 0.2 0.428571429 10 0 0 14 X:11837080-11837118 7 15 5193 FBgn0266019 2080.863333 30.08666667 46.56 0.007208546 0.498559716 0.322164948 2 2 2 0.01 dme-miR-79-3p 6mer3-8 TAGCTT X 11851600 11851605 - X_11851600_11851605_- 1 1 1 0 p24-1 FBtr0334455|FBtr0073604 11851347|11850907 11851629|11851629 X - 11851600 11851628 3'utr p24-1 FlyBase G66804.2 GGATCAGGTTTCATTTTGGGATCTAGCTT 10 11851613 0.730550287 3 9 86 0.933333333 1.146128036 0.333333333 0.4 0.6 10 1 0 14 X:11851600-11851628 5 p24-1 FBtr0073604|FBtr0334455 11850907|11851347 11851629|11851629 TAGCTT 6mer3-8 dme-miR-79-3p X - 11851599 11851629 3'utr p24-1 FlyBase G50308.1 AGGATCAGGTTTCATTTTGGGATCTAGCTTA 6 11851613 0.738344454 3 6 57 1 0.954242509 0.111111111 0.333333333 0.555555556 6 0 0 9 X:11851599-11851629 6 7.5 5194 FBgn0030341 412.8333333 45.45666667 69.24666667 0.018167138 0.1649923 0.108308463 8 8 8 0.01 dme-miR-283-5p 6mer3-8 TGATAT X 11864981 11864986 - X_11864981_11864986_- 1 1 1 0 CG2025 FBtr0073601 11864649 11865104 X - 11864971 11865031 3'utr CG2025 FlyBase G66823.1 GCCAAAGGTAGACGATTAGTTACACAGGAAGCAACCTTTTTCTCATGATATCCTCCTGACC 12 11864993 0.990955716 7 10 81 0.857142857 1.079181246 0.214285714 0.166666667 0.285714286 12 2 0 12 X:11864971-11865031 6 CG2025 FBtr0073601 11864649 11865104 TGATAT 6mer3-8 dme-miR-283-5p X - 11864949 11864993 3'utr CG2025 FlyBase G50323.1 TTTCTCATGATATCCTCCTGACCAAGTCGGGAATTTGCTCTTATG 5 11864992 0.954531376 3 4 41 0.8 0.602059991 0 0 0 5 1 0 4 X:11864949-11864993 6 6 5195 FBgn0030344 443.1533333 13.33 20.59 0.013539332 0.450112528 0.291403594 7 6 6.5 0.01 dme-miR-283-5p 7mer-m1 GATATTT X 11870950 11870956 + X_11870950_11870956_+ 0.765586663 0.765586663 0.765586663 0 CG1847 FBtr0330413|FBtr0073567 11870497|11870431 11871168|11871168 X + 11870932 11870974 3'utr CG1847 FlyBase G60830.1 TTGTATATCCCTATATGCGATATTTACTCGTAGCTAGAATCTA 17 11870945 0.78826669 5 17 164 1 1.397940009 0.12 0.352941176 0.56 17 0 0 25 X:11870932-11870974 7 CG1847 FBtr0330413|FBtr0073567 11870497|11870431 11871168|11871168 GATATTT 7mer-m1 dme-miR-283-5p X + 11870890 11870965 3'utr CG1847 FlyBase G45938.2 CACATTTGTTGTCCATAGTCGTATATGTATGTTTGTATTGTATTGTATATCCCTATATGCGATATTTACTCGTAGC 21 11870945 0.813196203 5 16 202 0.827586207 1.380211242 0.103448276 0.333333333 0.517241379 21 5 0 24 X:11870890-11870965 7 15 5196 FBgn0030345 101 6.976666667 10.73666667 0.148514851 2.150023889 1.397081652 5 5 5 0.01 dme-miR-305-3p 7mer-m1 TGTGCCG X 11877805 11877811 - X_11877805_11877811_- 0.825574864 0.819503711 0.822539287 0.004292987 CG10353 FBtr0331591|FBtr0331594|FBtr0344702|FBtr0114451|FBtr0308070|FBtr0114452|FBtr0344703 11877735|11877735|11877735|11877735|11877735|11877735|11877735 11878742|11878742|11878742|11878742|11878742|11878742|11878742 X - 11877793 11877827 3'utr CG10353 FlyBase G66853.1 AAAACAAATTGTGTTGTGTGCCGGATAAAAAAAAA 10 11877810 0.717539577 5 10 62 1 1.041392685 0.181818182 0.1 0.181818182 10 0 0 11 X:11877793-11877827 7 CG10353 FBtr0344702|FBtr0331594|FBtr0331591|FBtr0344703|FBtr0114452|FBtr0308070|FBtr0114451 11877735|11877735|11877735|11877735|11877735|11877735|11877735 11878742|11878742|11878742|11878742|11878742|11878742|11878742 TGTGCCG 7mer-m1 dme-miR-305-3p X - 11877795 11877826 3'utr CG10353 FlyBase G50343.1 AAACAAATTGTGTTGTGTGCCGGATAAAAAAA 5 11877812 0.662485519 3 5 35 1 0.903089987 0 0.6 0.75 5 0 0 8 X:11877795-11877826 7 7.5 5197 FBgn0030349 1118.516667 30.53 46.76333333 0.006705309 0.245660007 0.160382066 -1 1 0 0.01 dme-miR-11-3p 8mer-m1 CTGTGATG X 11889011 11889018 + X_11889011_11889018_+ 0.462274223 0.462274223 0.462274223 0 CG1840 FBtr0073571|FBtr0331590 11888967|11888967 11889186|11889186 X + 11888997 11889035 3'utr CG1840 FlyBase G60837.2 AATCCAACTCACCTCTGTGATGCGGCAATTAAAATAGAT 20 11889010 0.797048552 4 15 96 0.814814815 1.041392685 0.259259259 0.2 0.407407407 20 4 1 22 X:11888997-11889035 8 CG1840 FBtr0073571|FBtr0331590 11888967|11888967 11889186|11889186 CTGTGATG 8mer-m1 dme-miR-11-3p X + 11888997 11889026 3'utr CG1840 FlyBase G45942.1 AATCCAACTCACCTCTGTGATGCGGCAATT 19 11889010 0.67823952 4 14 101 0.740740741 1.301029996 0.185185185 0.315789474 0.518518519 19 7 0 20 X:11888997-11889026 8 19 5198 FBgn0030351 18.33333333 3.326666667 5.123333333 1.036363636 5.711422846 3.708523097 1 1 1 0.01 dme-miR-14-3p 8mer-A1 AAGACTGA X 11900956 11900963 - X_11900956_11900963_- 0.643565469 0.643565469 0.643565469 0 Upf1 FBtr0073596|FBtr0342744 11899994|11900443 11901237|11901237 X - 11900941 11901022 3'utr Upf1 FlyBase G66866.1 GAGGCAGCGTGATAGATGGAGACGGATATGGCAAGATGTGGAGTTACAAAGTAATAAAGAAGACTGAGACGGGAGAGAGATG 7 11900970 0.849820436 6 7 21 1 0.84509804 0.428571429 0 0 7 0 0 7 X:11900941-11901022 8 Upf1 FBtr0073596|FBtr0342744 11899994|11900443 11901237|11901237 AAGACTGA 8mer-A1 dme-miR-14-3p X - 11900912 11900975 3'utr Upf1 FlyBase G50348.1 AAAGTAATAAAGAAGACTGAGACGGGAGAGAGATGTCGAAAGATCGAAATATCGAGAGCAAATC 10 11900969 0.917531891 7 8 24 0.823529412 1.146128036 0.470588235 0.7 0.823529412 10 3 0 14 X:11900912-11900975 8 6 5199 FBgn0030354 1109.723333 26.07 40.02333333 0.005406753 0.230149597 0.149912551 7 6 6.5 0.01 dme-miR-995-5p 6mer3-8 AATTCG X 11907494 11907499 - X_11907494_11907499_- 1 1 1 0 pot FBtr0073595|FBtr0305609 11907407|11907407 11908579|11908579 X - 11907438 11907525 3'utr pot FlyBase G66882.1 AGCCGTATAAACAAACTTACATATTTAATTCGCTTTTTGGCTGGGCAAGCCTTCCAAAATGTGTATAATCTAAAACAATTTGAATTAA 9 11907489 0.980640075 5 8 62 1 1.113943352 0 0.333333333 0.538461538 9 0 0 13 X:11907438-11907525 6 pot FBtr0305609|FBtr0073595 11907407|11907407 11908579|11908579 AATTCG 6mer3-8 dme-miR-995-5p X - 11907444 11907514 3'utr pot FlyBase G50358.1 CAAACTTACATATTTAATTCGCTTTTTGGCTGGGCAAGCCTTCCAAAATGTGTATAATCTAAAACAATTTG 9 11907489 0.987873275 8 9 75 1 1.176091259 0.066666667 0.666666667 0.8 9 0 0 15 X:11907444-11907514 6 6 5200 FBgn0250871 1 0.03 0.05 6 200 120 -10 -10 -10 0.01 dme-miR-184-3p 8mer-A1 TCCGTCCA X 11907593 11907600 - X_11907593_11907600_- 0.631136385 0.631136385 0.631136385 0 pot FBtr0073595|FBtr0305609 11907407|11907407 11908579|11908579 X - 11907574 11907650 3'utr pot FlyBase G66883.1 TACGATATACTTTCTCATGATAATCAATTTTCGCGTAACATTAGTACTAATCCGTCCAAGACATATACTATAAGTTT 79 11907602 0.78841305 10 71 591 0.905263158 1.33243846 0.210526316 0.151898734 0.294736842 79 6 3 86 X:11907574-11907650 8 pot FBtr0305609|FBtr0073595 11907407|11907407 11908579|11908579 TCCGTCCA 8mer-A1 dme-miR-184-3p X - 11907574 11907649 3'utr pot FlyBase G50359.1 ACGATATACTTTCTCATGATAATCAATTTTCGCGTAACATTAGTACTAATCCGTCCAAGACATATACTATAAGTTT 62 11907604 0.75493953 7 57 431 0.91011236 1.607455023 0.269662921 0.322580645 0.528089888 62 7 1 81 X:11907574-11907649 8 46 5201 FBgn0250871 1 0.03 0.05 46 1533.333333 920 2 4 3 0.01 dme-miR-184-5p 6mer3-8 TGATAA X 11907628 11907633 - X_11907628_11907633_- 1 1 1 0 pot FBtr0073595|FBtr0305609 11907407|11907407 11908579|11908579 X - 11907574 11907650 3'utr pot FlyBase G66883.1 TACGATATACTTTCTCATGATAATCAATTTTCGCGTAACATTAGTACTAATCCGTCCAAGACATATACTATAAGTTT 79 11907633 0.78841305 10 71 591 0.905263158 1.33243846 0.210526316 0.151898734 0.294736842 79 6 3 86 X:11907574-11907650 6 pot FBtr0305609|FBtr0073595 11907407|11907407 11908579|11908579 TGATAA 6mer3-8 dme-miR-184-5p X - 11907574 11907649 3'utr pot FlyBase G50359.1 ACGATATACTTTCTCATGATAATCAATTTTCGCGTAACATTAGTACTAATCCGTCCAAGACATATACTATAAGTTT 62 11907604 0.75493953 7 57 431 0.91011236 1.607455023 0.269662921 0.322580645 0.528089888 62 7 1 81 X:11907574-11907649 6 24 5202 FBgn0250871 1 0.03 0.05 24 800 480 0 -29 -14.5 0.01 dme-miR-308-3p 7mer-m1 TGTGATT X 12023151 12023157 - X_12023151_12023157_- 0.521223855 0.521223855 0.521223855 0 Usp7 FBtr0073641 12022835 12024307 X - 12023099 12023208 3'utr Usp7 FlyBase G66898.1 AGGCGTATGTATGGGAGATGAAAAATATAAGATTTGTTTCAAACAATTATTTGTGATTTTTAAACATGAAATGATAAAAATGTATGCAAAGGACTAGACAACATAAAATT 107 12023159 0.87340866 16 105 935 0.9765625 1.619788758 0.171875 0.168224299 0.3046875 107 1 2 125 X:12023099-12023208 7 Usp7 FBtr0073641 12022835 12024307 TGTGATT 7mer-m1 dme-miR-308-3p X - 12023087 12023202 3'utr Usp7 FlyBase G50369.1 ATGTATGGGAGATGAAAAATATAAGATTTGTTTCAAACAATTATTTGTGATTTTTAAACATGAAATGATAAAAATGTATGCAAAGGACTAGACAACATAAAATTAATTAATAAATT 59 12023159 0.918033586 14 59 461 1 1.949390007 0.06741573 0.389830508 0.595505618 59 0 0 89 X:12023087-12023202 7 46 5203 FBgn0030366 4316.233333 92.58333333 142.4366667 0.010657441 0.496849685 0.322950551 2 2 2 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT X 12023375 12023380 - X_12023375_12023380_- 1 1 1 0 Usp7 FBtr0073641 12022835 12024307 X - 12023367 12023410 3'utr Usp7 FlyBase G66900.1 ATATAGATTATAGGTAAACGAGAGAGGAAGAGCTGTAAACAAAT 29 12023375 0.905149628 6 28 86 0.970588235 1.217483944 0.088235294 0.172413793 0.294117647 29 0 1 33 X:12023367-12023410 6 Usp7 FBtr0073641 12022835 12024307 AGCTGT 6mer3-8 dme-miR-1008-3p X - 12023367 12023423 3'utr Usp7 FlyBase G50371.1 AGAGGAGCATTATATATAGATTATAGGTAAACGAGAGAGGAAGAGCTGTAAACAAAT 12 12023375 0.871598928 5 12 40 1 1.204119983 0.25 0.333333333 0.5 12 0 0 16 X:12023367-12023423 6 17 5204 FBgn0030366 4316.233333 92.58333333 142.4366667 0.003938619 0.183618362 0.119351291 -5 -5 -5 0.01 dme-miR-190-5p 6mer3-8 ACATAT X 12024044 12024049 - X_12024044_12024049_- 1 1 1 0 Usp7 FBtr0073641|FBtr0342732 12022835|12023585 12024307|12024307 X - 12024046 12024102 3'utr Usp7 FlyBase G66904.2 CACACACACACACATACACACACATGCGCGGAACTTACCCTTTTTACTTTTATACAT 49 12024078 0.952500714 7 47 253 0.969230769 1.799340549 0.123076923 0.244897959 0.430769231 49 2 0 63 X:12024046-12024102 3 Usp7 FBtr0073641|FBtr0342732 12022835|12023585 12024307|12024307 ACATAT 6mer3-8 dme-miR-190-5p X - 12024048 12024095 3'utr Usp7 FlyBase G50374.1 ACACACATACACACACATGCGCGGAACTTACCCTTTTTACTTTTATAC 34 12024068 0.760484316 5 34 198 1 1.748188027 0.089285714 0.470588235 0.678571429 34 0 0 56 X:12024048-12024095 1 2 5205 FBgn0030366 4316.233333 92.58333333 142.4366667 0.000463367 0.02160216 0.014041328 29 19 24 0.01 dme-miR-988-3p 7mer-A1 CAAGGGA X 12024192 12024198 - X_12024192_12024198_- 0.782911824 0.782911824 0.782911824 0 Usp7 FBtr0073641|FBtr0342732 12022835|12023585 12024307|12024307 X - 12024181 12024222 3'utr Usp7 FlyBase G66905.1 GGGATTAAAAGGATGGATTGCGGGCAAGGGATTATGGCCGCA 9 12024205 0.87181554 3 9 26 1 1 0.4 0.111111111 0.2 9 0 0 10 X:12024181-12024222 7 Usp7 FBtr0073641|FBtr0342732 12022835|12023585 12024307|12024307 CAAGGGA 7mer-A1 dme-miR-988-3p X - 12024191 12024221 3'utr Usp7 FlyBase G50375.1 GGATTAAAAGGATGGATTGCGGGCAAGGGAT 10 12024204 0.777600807 2 9 29 0.916666667 1.041392685 0.416666667 0.2 0.333333333 10 1 0 11 X:12024191-12024221 7 9.5 5206 FBgn0030366 4316.233333 92.58333333 142.4366667 0.002200993 0.102610261 0.066696309 7 6 6.5 0.01 dme-miR-304-5p 6mer2-7 GAGATT X 1217114 1217119 - X_1217114_1217119_- 1 1 1 0 CG3638 FBtr0070249|FBtr0330206|FBtr0330207|FBtr0346960|FBtr0336978 1215712|1217081|1217081|1217081|1215287 1221459|1219704|1221459|1221459|1221459 X - 1217101 1217157 3'utr CG3638 FlyBase G63956.1 ACGGATCAGTTGTGGAAGAAATAATTGTAGTGCCATTAGAGATTGGAAAATTGAATA 8 1217122 0.972666833 6 8 51 1 0.954242509 0.222222222 0.125 0.222222222 8 0 0 9 X:1217101-1217157 6 CG3638 FBtr0346960|FBtr0336978|FBtr0330207|FBtr0330206|FBtr0070249 1217081|1215287|1217081|1217081|1215712 1221459|1221459|1221459|1219704|1221459 GAGATT 6mer2-7 dme-miR-304-5p X - 1217109 1217136 3'utr CG3638 FlyBase G48212.1 TAATTGTAGTGCCATTAGAGATTGGAAA 5 1217121 0.796256637 3 5 34 1 0.903089987 0 0.6 0.75 5 0 0 8 X:1217109-1217136 6 5 5207 FBgn0261444 352.62 5.606666667 8.55 0.01417957 0.891795482 0.584795322 3 2 2.5 0.01 dme-miR-278-3p 6mer3-8 CCCACC X 1220356 1220361 - X_1220356_1220361_- 1 1 1 0 CG3638 FBtr0070249|FBtr0308707|FBtr0330207|FBtr0346960|FBtr0336978 1215712|1217947|1217081|1217081|1215287 1221459|1221459|1221459|1221459|1221459 X - 1220330 1220399 3'utr CG3638 FlyBase G63959.1 ATCCCGCCTCCATTGTGAACCAACCGTTGCCCGAGATTCCCACCAATCAACAACAGTCAAAGATCTCCGC 6 1220363 0.945988905 3 6 24 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 X:1220330-1220399 6 CG3638 FBtr0346960|FBtr0336978|FBtr0330207|FBtr0070249|FBtr0308707 1217081|1215287|1217081|1215712|1217947 1221459|1221459|1221459|1221459|1221459 CCCACC 6mer3-8 dme-miR-278-3p X - 1220345 1220378 3'utr CG3638 FlyBase G48215.1 AACCGTTGCCCGAGATTCCCACCAATCAACAACA 5 1220363 0.796871475 2 4 16 0.857142857 0.77815125 0 0.2 0.428571429 5 1 0 6 X:1220345-1220378 6 3.5 5208 FBgn0261444 352.62 5.606666667 8.55 0.009925699 0.624256837 0.409356725 2 2 2 0.01 dme-miR-14-3p 6mer2-7 AGACTG X 12331843 12331848 + X_12331843_12331848_+ 1 1 1 0 Ten-a FBtr0300203|FBtr0299860|FBtr0300201|FBtr0346129|FBtr0308222|FBtr0299858|FBtr0308221|FBtr0346335|FBtr0308223|FBtr0299859|FBtr0310078 12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182 12332165|12332165|12332165|12335214|12332165|12332165|12332165|12332165|12332165|12332165|12335214 X + 12331825 12331869 3'utr Ten-a FlyBase G60869.1 TGGTACTCGAGCTTTTTGAGACTGGCATAGTTTTAAACAAAACCA 140 12331841 0.790078963 9 134 1296 0.941558442 1.860338007 0.012987013 0.078571429 0.162337662 140 8 1 145 X:12331825-12331869 6 Ten-a FBtr0310078|FBtr0308223|FBtr0299859|FBtr0346335|FBtr0308221|FBtr0299858|FBtr0308222|FBtr0346129|FBtr0300201|FBtr0299860|FBtr0300203 12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182 12335214|12332165|12332165|12332165|12332165|12332165|12332165|12335214|12332165|12332165|12332165 AGACTG 6mer2-7 dme-miR-14-3p X + 12331825 12331867 3'utr Ten-a FlyBase G45964.1 TGGTACTCGAGCTTTTTGAGACTGGCATAGTTTTAAACAAAAC 72 12331841 0.789914029 6 68 692 0.943396226 2 0.018867925 0.375 0.575471698 72 6 0 100 X:12331825-12331867 6 106 5209 FBgn0267001 445.45 3.99 6.113333333 0.237961612 26.56641604 17.3391494 2 2 2 0.01 dme-miR-1007-3p 6mer3-8 TGAGCT X 12460293 12460298 - X_12460293_12460298_- 0.89202187 1 0.946010935 0.076352047 Rab40 FBtr0073668|FBtr0339841|FBtr0073669 12459794|12459794|12459794 12460365|12460365|12460365 X - 12460267 12460313 3'utr Rab40 FlyBase G66931.1 GACATTAACTTTAATTGAGCTCTACTTATGTACTCTAGGCTATAACA 26 12460298 0.783987042 5 25 232 0.972972973 1.556302501 0.216216216 0.384615385 0.567567568 26 1 0 36 X:12460267-12460313 6 Rab40 FBtr0073669|FBtr0339841|FBtr0073668 12459794|12459794|12459794 12460365|12460365|12460365 TGAGCT 6mer3-8 dme-miR-1007-3p X - 12460273 12460309 3'utr Rab40 FlyBase G50395.1 TTAACTTTAATTGAGCTCTACTTATGTACTCTAGGCT 13 12460299 0.97318688 4 12 112 0.952380952 1.301029996 0 0.384615385 0.619047619 13 1 0 20 X:12460273-12460309 6 18.5 5210 FBgn0030391 73.34 5.683333333 8.663333333 0.252249795 3.255131965 2.135436706 0 1 0.5 0.01 dme-miR-980-5p 7mer-m1 AAAAACT X 12572393 12572399 - X_12572393_12572399_- 0.765586663 0.765586663 0.765586663 0 CG11138 FBtr0331718|FBtr0273245|FBtr0073662 12569167|12571209|12569749 12572485|12572485|12572485 X - 12572381 12572484 3'utr CG11138 FlyBase G66940.2 GTCCATTTTACTGTAAGAAGCTGCGCAGGGCTTTGGAGCACTTTTGAGAGGCGACAACACACTCCCCGGATAATATCTGGCATCTAAAAACTCTCGACACTTCT 48 12572407 0.966881076 12 43 259 0.964912281 1.740362689 0.122807018 0.166666667 0.298245614 48 2 0 55 X:12572381-12572484 7 CG11138 FBtr0073662|FBtr0273245|FBtr0331718 12569749|12571209|12569167 12572485|12572485|12572485 AAAAACT 7mer-m1 dme-miR-980-5p X - 12572342 12572424 3'utr CG11138 FlyBase G50403.1 ACTCCCCGGATAATATCTGGCATCTAAAAACTCTCGACACTTCTCTGTTGGGGTCACATTTTAAGGAGCAACTGACATTTTTT 17 12572407 0.803389525 6 17 98 1 1.431363764 0 0.411764706 0.62962963 17 0 0 27 X:12572342-12572424 7 24 5211 FBgn0030400 3724.663333 119.82 186.34 0.006443535 0.200300451 0.128796823 8 8 8 0.01 dme-miR-305-3p 6mer3-8 ATGTGC X 12584658 12584663 - X_12584658_12584663_- 1 1 1 0 LIMK1 FBtr0073660|FBtr0073661 12584383|12584383 12585938|12585938 X - 12584621 12584798 3'utr LIMK1 FlyBase G66954.1 ATATAGGATCGAAACGCTTGCAATTAACTGCTTACATAAGACATTTGAGTCGGGCCCTTGTTATACGGACGTATGCCAGTAGAACAGTGGCCGCGCCGAACCGATCTAGCATTTAACTATCTATATACAACAAATATGTGCGATATTTTTTATATGCAGCTAATTTAATGTGTTGTAT 69 12584662 0.986754341 15 68 584 0.987951807 1.913813852 0.036144578 0.173913043 0.313253012 69 1 0 82 X:12584621-12584798 6 LIMK1 FBtr0073661|FBtr0073660 12584383|12584383 12585938|12585938 ATGTGC 6mer3-8 dme-miR-305-3p X - 12584633 12584676 3'utr LIMK1 FlyBase G50411.1 ATATACAACAAATATGTGCGATATTTTTTATATGCAGCTAATTT 27 12584662 0.974713499 4 26 219 0.972972973 1.556302501 0 0.333333333 0.513513514 27 1 0 36 X:12584633-12584676 6 38 5212 FBgn0041203 1320 31.21333333 47.99333333 0.028787879 1.217428449 0.791776636 -1 -1 -1 0.01 dme-miR-13b-2-5p 7mer-A1 TTGACGA X 12584992 12584998 - X_12584992_12584998_- 0.782911824 0.782911824 0.782911824 0 LIMK1 FBtr0073660|FBtr0073661|FBtr0301831|FBtr0073659 12584383|12584383|12584943|12584943 12585938|12585938|12585938|12585938 X - 12584963 12585001 3'utr LIMK1 FlyBase G66956.1 GTATTGACGAGAATAAGTCTAACTCCTATAACTAAATAT 10 12584988 0.903612917 4 9 60 0.909090909 0.698970004 0.090909091 0.1 0.181818182 10 0 1 10 X:12584963-12585001 7 LIMK1 FBtr0073659|FBtr0301831|FBtr0073661|FBtr0073660 12584943|12584943|12584383|12584383 12585938|12585938|12585938|12585938 TTGACGA 7mer-A1 dme-miR-13b-2-5p X - 12584967 12585021 3'utr LIMK1 FlyBase G50413.1 GCTAAGAAACAAACTTTTTTGTATTGACGAGAATAAGTCTAACTCCTATAACTAA 10 12584988 0.978491124 4 10 68 1 1.230448921 0.058823529 0.6 0.764705882 10 0 0 17 X:12584967-12585021 7 7.5 5213 FBgn0041203 1320 31.21333333 47.99333333 0.005681818 0.240281931 0.156271704 -10 -10 -10 0.01 dme-miR-184-3p 6mer2-7 CCGTCC X 12585050 12585055 - X_12585050_12585055_- 1 1 1 0 LIMK1 FBtr0073660|FBtr0073661|FBtr0301831|FBtr0073659 12584383|12584383|12584943|12584943 12585938|12585938|12585938|12585938 X - 12585025 12585155 3'utr LIMK1 FlyBase G66957.1 AAATGTATTTGTATATCTATTCCATAATTATATAGATAAACGTATTCCATGTTAGTGCTTAAATCTAATTTATTATTTATCGATTCTCGACCCATTCACCCCGTCCCCTCATTCCAAGAACAATAATTAAC 17 12585046 0.990507784 9 11 123 0.65 0.636822098 0.05 0.176470588 0.3 17 5 2 13 X:12585025-12585155 6 LIMK1 FBtr0073659|FBtr0301831|FBtr0073661|FBtr0073660 12584943|12584943|12584383|12584383 12585938|12585938|12585938|12585938 CCGTCC 6mer2-7 dme-miR-184-3p X - 12585034 12585080 3'utr LIMK1 FlyBase G50414.1 TTTATCGATTCTCGACCCATTCACCCCGTCCCCTCATTCCAAGAACA 8 12585061 0.678903619 5 8 40 1 1.079181246 0 0.375 0.583333333 8 0 0 12 X:12585034-12585080 6 8 5214 FBgn0041203 1320 31.21333333 47.99333333 0.006060606 0.256300726 0.166689818 -9 6 -1.5 0.01 dme-miR-980-5p 6mer3-8 GAAAAA X 12585192 12585197 - X_12585192_12585197_- 1 1 1 0 LIMK1 FBtr0073660|FBtr0073661|FBtr0301831|FBtr0073659 12584383|12584383|12584943|12584943 12585938|12585938|12585938|12585938 X - 12585177 12585269 3'utr LIMK1 FlyBase G66958.1 CTGAAGAATCCTCGAGAGAGGGAGATCCCACCCGCAAAAAAAAGACAAAAGGAACGAAAAGAACTTTAACTAGAAAAATTGTGGTTTAAATAT 11 12585204 0.9991751 6 11 31 1 1.113943352 0.384615385 0.181818182 0.307692308 11 0 0 13 X:12585177-12585269 6 LIMK1 FBtr0073659|FBtr0301831|FBtr0073661|FBtr0073660 12584943|12584943|12584383|12584383 12585938|12585938|12585938|12585938 GAAAAA 6mer3-8 dme-miR-980-5p X - 12585177 12585225 3'utr LIMK1 FlyBase G50415.1 ACAAAAGGAACGAAAAGAACTTTAACTAGAAAAATTGTGGTTTAAATAT 7 12585204 0.939845972 4 7 30 1 0.903089987 0 0.142857143 0.25 7 0 0 8 X:12585177-12585225 6 3 5215 FBgn0041203 1320 31.21333333 47.99333333 0.002272727 0.096112772 0.062508682 7 7 7 0.01 dme-miR-968-5p 6mer3-8 ACTACT X 12608785 12608790 + X_12608785_12608790_+ 1 1 1 0 Sec16 FBtr0340106|FBtr0310304|FBtr0113445|FBtr0340104 12608756|12608756|12608756|12608756 12609910|12609910|12609910|12609910 X + 12608760 12608810 3'utr Sec16 FlyBase G60903.1 AATCAGGGGAGGGACTGGCCGGAGCACTACTCCCGAGATATGGAGCATTTG 8 12608775 0.824016916 6 8 22 1 0.903089987 0.625 0 0 8 0 0 8 X:12608760-12608810 6 Sec16 FBtr0340104|FBtr0113445|FBtr0310304|FBtr0340106 12608756|12608756|12608756|12608756 12609910|12609910|12609910|12609910 ACTACT 6mer3-8 dme-miR-968-5p X + 12608763 12608805 3'utr Sec16 FlyBase G45981.2 CAGGGGAGGGACTGGCCGGAGCACTACTCCCGAGATATGGAGC 7 12608775 0.889534474 4 5 11 0.8 0.77815125 0.333333333 0.714285714 0.866666667 7 2 1 12 X:12608763-12608805 6 5 5216 FBgn0052654 1220.54 20.34 31.29 0.004096547 0.245821042 0.159795462 10 10 10 0.01 dme-miR-7-5p 6mer2-7 TCTTCC X 12609435 12609440 + X_12609435_12609440_+ 1 1 1 0 Sec16 FBtr0340106|FBtr0310304|FBtr0113445|FBtr0340104 12608756|12608756|12608756|12608756 12609910|12609910|12609910|12609910 X + 12609419 12609452 3'utr Sec16 FlyBase G60906.1 ATATCCACACACGACCTCTTCCCCGATTTCTGTT 18 12609437 0.664848992 2 17 75 0.894736842 1.230448921 0.157894737 0.055555556 0.105263158 18 2 0 17 X:12609419-12609452 6 Sec16 FBtr0340104|FBtr0113445|FBtr0310304|FBtr0340106 12608756|12608756|12608756|12608756 12609910|12609910|12609910|12609910 TCTTCC 6mer2-7 dme-miR-7-5p X + 12609423 12609450 3'utr Sec16 FlyBase G45984.1 CCACACACGACCTCTTCCCCGATTTCTG 5 12609437 0.89906212 2 5 18 1 1 0.5 0.6 0.8 5 0 0 10 X:12609423-12609450 6 11.5 5217 FBgn0052654 1220.54 20.34 31.29 0.009422059 0.565388397 0.367529562 -2 -2 -2 0.01 dme-miR-970-3p 6mer3-8 TCTTAT X 12609691 12609696 + X_12609691_12609696_+ 0.999680624 1 0.999840312 0.00022585 Sec16 FBtr0340106|FBtr0310304|FBtr0113445|FBtr0340104 12608756|12608756|12608756|12608756 12609910|12609910|12609910|12609910 X + 12609661 12609767 3'utr Sec16 FlyBase G60909.1 AGAAGCAAATGAATTGTTCTCCCTGGTTTCTCTTATCAATGTATTCTCCTCTGTGTTTCTTTTTTACAATTGGTGTGAAATATGCAAATGATTCCAATTATATATAT 21 12609687 0.901102045 13 21 204 1 1.380211242 0.041666667 0.095238095 0.208333333 21 0 0 24 X:12609661-12609767 6 Sec16 FBtr0340104|FBtr0113445|FBtr0310304|FBtr0340106 12608756|12608756|12608756|12608756 12609910|12609910|12609910|12609910 TCTTAT 6mer3-8 dme-miR-970-3p X + 12609660 12609721 3'utr Sec16 FlyBase G45985.1 AAGAAGCAAATGAATTGTTCTCCCTGGTTTCTCTTATCAATGTATTCTCCTCTGTGTTTCTT 9 12609704 0.964568856 6 6 99 0.769230769 0.698970004 0.153846154 0.444444444 0.615384615 9 2 1 10 X:12609660-12609721 6 5.5 5218 FBgn0052654 1220.54 20.34 31.29 0.004506202 0.270403147 0.175775008 4 -13 -4.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 12679357 12679362 + X_12679357_12679362_+ 1 1 1 0 Tis11 FBtr0073683|FBtr0345165|FBtr0333756 12679239|12679239|12679239 12679702|12679702|12682554 X + 12679215 12679403 stop_codon Tis11 FlyBase G60957.1 AGCAGCAGTCCAATTTGGGACTCTAAACGCGTGGCAGTCTGCGAAACAAAATTGAATTGAAACACCATCCAGCATCCAACTCACGCCCATCCAAGCATCCCTCCATCAACAAACCAGCATCCTTGACAAAATCTCAGTAACGACCAAACCATGGAAACTGAAAACAAAACTACTCTCGCAGTCCAATTT 93 12679366 0.986027143 19 84 299 0.903508772 1.53571597 0.052631579 0.204301075 0.350877193 93 9 2 103 X:12679215-12679403 6 Tis11 FBtr0333756|FBtr0345165|FBtr0073683 12679239|12679239|12679239 12682554|12679702|12679702 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 12679231 12679381 stop_codon Tis11 FlyBase G46017.1 GGGACTCTAAACGCGTGGCAGTCTGCGAAACAAAATTGAATTGAAACACCATCCAGCATCCAACTCACGCCCATCCAAGCATCCCTCCATCAACAAACCAGCATCCTTGACAAAATCTCAGTAACGACCAAACCATGGAAACTGAAAACAA 59 12679338 0.997724912 12 53 189 0.885057471 1.58546073 0.022988506 0.355932203 0.563218391 59 9 1 77 X:12679231-12679381 6 23.5 5219 FBgn0011837 4912.7 119.65 184.0333333 0.00478352 0.196406185 0.127694258 -9 19 5 0.01 dme-miR-1008-3p 7mer-A1 GCTGTGA X 12679536 12679542 + X_12679536_12679542_+ 0.823349561 0.823349559 0.82334956 0 Tis11 FBtr0073683|FBtr0345165|FBtr0333756 12679239|12679239|12679239 12679702|12679702|12682554 X + 12679484 12679593 5'utr Tis11 FlyBase G60958.1 AACACAGACACCCCTTAATTATGAACCGATCCTTGATATCAATTCTCTCATTGCTGTGACAGTCAAACGTAATCGTTATACAATAATCGTTATATGAGAAGGACCGAATT 389 12679534 0.918152102 20 381 3064 0.979638009 2.335457901 0.088235294 0.12596401 0.230769231 389 8 1 433 X:12679484-12679593 7 Tis11 FBtr0333756|FBtr0345165|FBtr0073683 12679239|12679239|12679239 12682554|12679702|12679702 GCTGTGA 7mer-A1 dme-miR-1008-3p X + 12679489 12679561 5'utr Tis11 FlyBase G46019.1 AGACACCCCTTAATTATGAACCGATCCTTGATATCAATTCTCTCATTGCTGTGACAGTCAAACGTAATCGTTA 239 12679534 0.755531465 11 224 1903 0.942558747 1.955447211 0.093994778 0.426778243 0.64229765 239 19 3 361 X:12679489-12679561 7 275.5 5220 FBgn0011837 4912.7 119.65 184.0333333 0.056079142 2.302549102 1.497011411 2 2 2 0.01 dme-miR-970-3p 8mer-A1 TCTTATGA X 12679763 12679770 + X_12679763_12679770_+ 0.630790218 0.630790218 0.630790218 0 Tis11 FBtr0333756 12679239 12682554 X + 12679737 12679822 3'utr Tis11 FlyBase G60960.1 ATGAATGCTATAGCTAAACAAAACATTCTTATGAACTGGACAAGATACAAAGACGGAGATAACGAAAAGGACTATTTGGGAATCTT 927 12679762 0.862003026 11 920 5440 0.991493384 2.543654233 0.396975425 0.116504854 0.225897921 927 7 2 1049 X:12679737-12679822 8 Tis11 FBtr0333756 12679239 12682554 TCTTATGA 8mer-A1 dme-miR-970-3p X + 12679723 12679841 3'utr Tis11 FlyBase G46021.1 AAAACATAGCTAGCATGAATGCTATAGCTAAACAAAACATTCTTATGAACTGGACAAGATACAAAGACGGAGATAACGAAAAGGACTATTTGGGAATCTTCAGCGAATGTTGCTCAAAT 594 12679762 0.972471895 9 590 3508 0.995348837 2.330413773 0.404651163 0.326599327 0.534883721 594 1 3 856 X:12679723-12679841 8 751 5221 FBgn0011837 4912.7 119.65 184.0333333 0.152869094 6.276640201 4.080782467 1 1 1 0.01 dme-miR-7-5p 8mer-A1 GTCTTCCA X 12680143 12680150 + X_12680143_12680150_+ 0.675381664 0.675381664 0.675381664 0 Tis11 FBtr0333756 12679239 12682554 X + 12680054 12680168 3'utr Tis11 FlyBase G60963.1 ATATATATATATGCATATTTGGCCACCACCTGTGTATATATAACTTTTGATGTGGATAAATAGAGAGCGAGATAGAGAGTTGGTCCGATGTCTTCCAATCCAAGCCAAGCCAAGC 83 12680142 0.982557211 11 81 606 0.980392157 2 0.029411765 0.180722892 0.333333333 83 2 0 100 X:12680054-12680168 8 Tis11 FBtr0333756 12679239 12682554 GTCTTCCA 8mer-A1 dme-miR-7-5p X + 12680118 12680169 3'utr Tis11 FlyBase G46024.1 GAGCGAGATAGAGAGTTGGTCCGATGTCTTCCAATCCAAGCCAAGCCAAGCC 46 12680142 0.980509136 4 45 321 0.985507246 1.832508913 0.15942029 0.326086957 0.550724638 46 1 0 68 X:12680118-12680169 8 57.5 5222 FBgn0011837 4912.7 119.65 184.0333333 0.011704358 0.480568324 0.312443398 1 1 1 0.01 dme-bantam-3p 6mer3-8 TGATCT X 12680370 12680375 + X_12680370_12680375_+ 0.999066127 0.996475248 0.997770688 0.001832043 Tis11 FBtr0333756 12679239 12682554 X + 12680272 12680398 3'utr Tis11 FlyBase G60965.1 ATTATGTAATAGAAAACGTTATGTACATACGAGAGTTAATATTTTGATAAAGATAATAAATTATAATTACCAATTACTCTATGATTACGTTTAAATGATGATCTTGAATGATATGAATATTATTGAT 176 12680370 0.986549479 16 173 1474 0.986784141 2.350248018 0.427312775 0.210227273 0.387665198 176 3 0 224 X:12680272-12680398 6 Tis11 FBtr0333756 12679239 12682554 TGATCT 6mer3-8 dme-bantam-3p X + 12680339 12680419 3'utr Tis11 FlyBase G46027.1 TACCAATTACTCTATGATTACGTTTAAATGATGATCTTGAATGATATGAATATTATTGATGATATACCTCTGCAAATCGTG 112 12680370 0.80003014 14 108 930 0.967532468 2.173186268 0.519480519 0.276785714 0.474025974 112 5 0 149 X:12680339-12680419 6 120 5223 FBgn0011837 4912.7 119.65 184.0333333 0.024426486 1.002925198 0.652055787 0 0 0 0.01 dme-miR-92b-3p 7mer-m1 TGCAATT X 12680654 12680660 + X_12680654_12680660_+ 0.765586663 0.765586663 0.765586663 0 Tis11 FBtr0333756 12679239 12682554 X + 12680625 12680694 3'utr Tis11 FlyBase G60967.1 TACATAAAACATACCAGATATATTTTATATGCAATTAATGTTAATAATTTATGAAAACAACACATGCGAC 10 12680636 0.987055853 7 9 76 0.933333333 1.146128036 0 0.5 0.666666667 10 1 0 14 X:12680625-12680694 7 Tis11 FBtr0333756 12679239 12682554 TGCAATT 7mer-m1 dme-miR-92b-3p X + 12680616 12680661 3'utr Tis11 FlyBase G46029.1 ACATCTATTTACATAAAACATACCAGATATATTTTATATGCAATTA 6 12680648 0.987143297 5 5 48 0.833333333 0.698970004 0 0 0 6 1 0 5 X:12680616-12680661 7 4 5224 FBgn0011837 4912.7 119.65 184.0333333 0.000814216 0.03343084 0.021735193 18 6 12 0.01 dme-miR-184-5p 6mer3-8 TGATAA X 12680947 12680952 + X_12680947_12680952_+ 1 1 1 0 Tis11 FBtr0333756 12679239 12682554 X + 12680920 12680971 3'utr Tis11 FlyBase G60969.2 ACCATATTATAATTATGCTTACGTCGATGATAATGAAGTAAATGCATATGTA 722 12680953 0.890241912 6 719 4844 0.998837209 2.933993164 0.122093023 0.157894737 0.293023256 722 1 0 859 X:12680920-12680971 6 Tis11 FBtr0333756 12679239 12682554 TGATAA 6mer3-8 dme-miR-184-5p X + 12680924 12680977 3'utr Tis11 FlyBase G46031.2 TATTATAATTATGCTTACGTCGATGATAATGAAGTAAATGCATATGTAATAAAA 674 12680953 0.887890992 7 670 4576 0.994152047 3.008600172 0.072124756 0.363501484 0.581871345 674 6 0 1020 X:12680924-12680977 6 694.5 5225 FBgn0011837 4912.7 119.65 184.0333333 0.14136829 5.804429586 3.773772867 -6 -6 -6 0.01 dme-miR-980-3p 6mer3-8 GGCAGC X 12681817 12681822 + X_12681817_12681822_+ 1 1 1 0 Tis11 FBtr0333756 12679239 12682554 X + 12681726 12681857 3'utr Tis11 FlyBase G60974.2 ACTTTGATTTTTACTTCCCATCGCAAAAAAACCCATTGTTTTCGTACTCCAATACGTATTGCAATCGAAATTGAACCGATTGGAATGTTATGGCAGCGTGCAAAAGTTTACTGTAATACCTATATTTAACAT 146 12681816 0.964546533 21 143 911 0.982142857 1.916453949 0.119047619 0.136986301 0.25 146 2 1 165 X:12681726-12681857 6 Tis11 FBtr0333756 12679239 12682554 GGCAGC 6mer3-8 dme-miR-980-3p X + 12681780 12681871 3'utr Tis11 FlyBase G46036.1 CGTATTGCAATCGAAATTGAACCGATTGGAATGTTATGGCAGCGTGCAAAAGTTTACTGTAATACCTATATTTAACATACTTATATATAATA 85 12681816 0.980100671 11 79 549 0.940397351 1.851258349 0.17218543 0.529411765 0.735099338 85 8 1 142 X:12681780-12681871 6 96 5226 FBgn0011837 4912.7 119.65 184.0333333 0.019541189 0.802340159 0.52164463 1 1 1 0.01 dme-miR-1007-3p 7mer-m8 TGAGCTT X 12681920 12681926 + X_12681920_12681926_+ 0.608572487 0.62020332 0.614387904 0.008224218 Tis11 FBtr0333756 12679239 12682554 X + 12681898 12681958 3'utr Tis11 FlyBase G60975.1 TTTAAAAAGCCTAACTTAGACCTGAGCTTTGGTTATCATCATGATGATTATTCTTATATTT 29 12681914 0.948881574 8 25 238 0.888888889 1.204119983 0.055555556 0.206896552 0.361111111 29 3 1 32 X:12681898-12681958 7 Tis11 FBtr0333756 12679239 12682554 TGAGCTT 7mer-m8 dme-miR-1007-3p X + 12681897 12681939 3'utr Tis11 FlyBase G46037.1 TTTTAAAAAGCCTAACTTAGACCTGAGCTTTGGTTATCATCAT 15 12681914 0.914918541 5 14 93 1 1.361727836 0.086956522 0.5 0.695652174 14 0 0 23 X:12681897-12681939 7 20.5 5227 FBgn0011837 4912.7 119.65 184.0333333 0.004172858 0.171333055 0.111392864 6 6 6 0.01 dme-miR-283-5p 6mer3-8 TGATAT X 12682267 12682272 + X_12682267_12682272_+ 1 1 1 0 Tis11 FBtr0333756 12679239 12682554 X + 12682255 12682290 3'utr Tis11 FlyBase G60977.1 AATATTTTTCATTGATATCCGCCTTGGCAACAACAA 33 12682267 0.719034318 5 32 269 1 1.568201724 0.054054054 0.090909091 0.189189189 33 0 0 37 X:12682255-12682290 6 Tis11 FBtr0333756 12679239 12682554 TGATAT 6mer3-8 dme-miR-283-5p X + 12682246 12682291 3'utr Tis11 FlyBase G46041.1 ATATACCATAATATTTTTCATTGATATCCGCCTTGGCAACAACAAA 24 12682267 0.886689218 4 22 204 0.941176471 1.505149978 0.029411765 0.333333333 0.529411765 24 2 0 32 X:12682246-12682291 6 28 5228 FBgn0011837 4912.7 119.65 184.0333333 0.005699514 0.23401588 0.15214635 0 0 0 0.01 dme-miR-1006-3p 6mer2-7 GAATTT X 12682397 12682402 + X_12682397_12682402_+ 1 1 1 0 Tis11 FBtr0333756 12679239 12682554 X + 12682365 12682458 3'utr Tis11 FlyBase G60978.1 AAACAACTAATAAATGAACACAATCTGTACATGAATTTTGTTAATGCTGAAACATGCCTATTTATGCTTCCATTGCAACACTTTTGTGCGTATT 61 12682390 0.982634752 12 61 456 1 1.84509804 0.042857143 0.147540984 0.257142857 61 0 0 70 X:12682365-12682458 6 Tis11 FBtr0333756 12679239 12682554 GAATTT 6mer2-7 dme-miR-1006-3p X + 12682373 12682411 3'utr Tis11 FlyBase G46042.1 AATAAATGAACACAATCTGTACATGAATTTTGTTAATGC 34 12682390 0.787113895 4 33 233 1 1.72427587 0.075471698 0.411764706 0.622641509 34 0 0 53 X:12682373-12682411 6 43.5 5229 FBgn0011837 4912.7 119.65 184.0333333 0.008854601 0.363560384 0.236370223 7 7 7 0.01 dme-miR-14-3p 6mer3-8 AAGACT X 12685370 12685375 - X_12685370_12685375_- 1 1 1 0 Smr FBtr0333768|FBtr0333767 12684201|12684201 12687299|12687299 X - 12685328 12685399 3'utr Smr FlyBase G66986.1 TATATGAAGTAAACAACAAACGCTAAGACTTATTCAACAAAACAAAAATTGTAAAATATTAAAAGATAAACG 45 12685367 0.950580424 4 43 191 0.947368421 1.73239376 0.052631579 0.266666667 0.421052632 45 3 0 54 X:12685328-12685399 6 Smr FBtr0333767|FBtr0333768 12684201|12684201 12687299|12687299 AAGACT 6mer3-8 dme-miR-14-3p X - 12685353 12685397 3'utr Smr FlyBase G50432.1 TATGAAGTAAACAACAAACGCTAAGACTTATTCAACAAAACAAAA 35 12685367 0.945735132 3 34 144 0.966666667 1.763427994 0 0.571428571 0.75 35 2 0 58 X:12685353-12685397 6 39.5 5230 FBgn0265523 12357.95 106.01 163.76 0.003196323 0.372606358 0.241206644 -8 -8 -8 0.01 dme-miR-317-3p 6mer3-8 TGTGTT X 12685739 12685744 - X_12685739_12685744_- 1 1 1 0 Smr FBtr0333768|FBtr0333767 12684201|12684201 12687299|12687299 X - 12685708 12685756 3'utr Smr FlyBase G66987.1 ATGGAGCAAGATTGTGTTTTATTCCCTTCTTAGGCAAGCGCTATTGAAT 18 12685745 0.843340023 5 18 161 1 1.278753601 0.105263158 0.055555556 0.105263158 18 0 0 19 X:12685708-12685756 6 Smr FBtr0333767|FBtr0333768 12684201|12684201 12687299|12687299 TGTGTT 6mer3-8 dme-miR-317-3p X - 12685681 12685771 3'utr Smr FlyBase G50433.1 TGCAAGGCCTAATTTATGGAGCAAGATTGTGTTTTATTCCCTTCTTAGGCAAGCGCTATTGAATTATGTACGTTTAATTGCTAAGCTAATG 12 12685745 0.987012027 7 12 110 1 1.361727836 0.304347826 0.5 0.739130435 12 0 0 23 X:12685681-12685771 6 12.5 5231 FBgn0265523 12357.95 106.01 163.76 0.001011495 0.117913404 0.076331216 1 1 1 0.01 dme-miR-33-5p 6mer2-7 AATGCA X 12686503 12686508 - X_12686503_12686508_- 1 1 1 0 Smr FBtr0333765|FBtr0333768|FBtr0333766|FBtr0333767 12685999|12684201|12685999|12684201 12687299|12687299|12687299|12687299 X - 12686489 12686532 3'utr Smr FlyBase G66991.1 ATAAACAAATTGTGGATGCAGGAGAATGCAGACTAGCATAAAAC 5 12686522 0.921071968 4 5 20 1 0.77815125 0 0.2 0.333333333 5 0 0 6 X:12686489-12686532 6 Smr FBtr0333766|FBtr0333767|FBtr0333765|FBtr0333768 12685999|12684201|12685999|12684201 12687299|12687299|12687299|12687299 AATGCA 6mer2-7 dme-miR-33-5p X - 12686494 12686530 3'utr Smr FlyBase G50436.1 AAACAAATTGTGGATGCAGGAGAATGCAGACTAGCAT 5 12686506 0.984734109 2 4 13 1 0.84509804 0.571428571 0.5 0.714285714 4 0 0 7 X:12686494-12686530 6 3 5232 FBgn0265523 12357.95 106.01 163.76 0.000242759 0.028299217 0.018319492 14 -2 6 0.01 dme-miR-980-5p 6mer3-8 GAAAAA X 12686714 12686719 - X_12686714_12686719_- 1 1 1 0 Smr FBtr0333765|FBtr0333768|FBtr0333766|FBtr0333767 12685999|12684201|12685999|12684201 12687299|12687299|12687299|12687299 X - 12686676 12686725 3'utr Smr FlyBase G66992.1 AGATAAGAAAAAAGGCTTTAACAAAAAGAAGAATTAAATTAAGAGCAGGC 6 12686707 0.904124939 3 5 16 0.714285714 0.698970004 0 0.166666667 0.285714286 6 2 0 5 X:12686676-12686725 6 Smr FBtr0333766|FBtr0333767|FBtr0333765|FBtr0333768 12685999|12684201|12685999|12684201 12687299|12687299|12687299|12687299 GAAAAA 6mer3-8 dme-miR-980-5p X - 12686681 12686730 3'utr Smr FlyBase G50437.3 ATAACAGATAAGAAAAAAGGCTTTAACAAAAAGAAGAATTAAATTAAGAG 9 12686707 0.929653448 3 7 26 0.533333333 0.903089987 0.266666667 0.333333333 0.6 9 7 0 8 X:12686681-12686730 6 5.5 5233 FBgn0265523 12357.95 106.01 163.76 0.000445058 0.051881898 0.033585735 -12 -12 -12 0.01 dme-miR-8-3p 7mer-A1 AGTATTA X 12757848 12757854 - X_12757848_12757854_- 0.823349562 0.823349562 0.823349562 0 ade5 FBtr0333799|FBtr0073705 12757034|12757758 12758051|12758051 X - 12757788 12757865 3'utr ade5 FlyBase G67033.1 ATTTTTTTATTAGTATTAGGAAAGCATGACTTCAACTTGTTGTACCACGTTCTTGACAGGTTACGAACTCGAAATAAC 25 12757826 0.98791879 11 22 196 0.888888889 1.380211242 0.037037037 0.08 0.148148148 25 3 0 24 X:12757788-12757865 7 ade5 FBtr0333799|FBtr0073705 12757034|12757758 12758051|12758051 AGTATTA 7mer-A1 dme-miR-8-3p X - 12757793 12757861 3'utr ade5 FlyBase G50462.1 TTTTATTAGTATTAGGAAAGCATGACTTCAACTTGTTGTACCACGTTCTTGACAGGTTACGAACTCGAA 27 12757826 0.822764096 11 27 183 1 1.579783597 0.026315789 0.333333333 0.526315789 27 0 0 38 X:12757793-12757861 7 13 5234 FBgn0020513 1857.626667 112.9666667 172.9033333 0.006998177 0.115078194 0.07518652 -28 -28 -28 0.01 dme-miR-12-5p 6mer2-7 ATACTC X 12760750 12760755 - X_12760750_12760755_- 1 1 1 0 CG12717 FBtr0346120 12760640 12761297 X - 12760735 12760789 3'utr CG12717 FlyBase G67046.1 TTTGGGAAACTGCAGGGTATTACCAATCAGCATTATACTCGACTCTAAGCCCACA 53 12760763 0.94367532 5 44 362 0.833333333 1.096910013 0.383333333 0.132075472 0.233333333 53 7 3 50 X:12760735-12760789 6 CG12717 FBtr0346120 12760640 12761297 ATACTC 6mer2-7 dme-miR-12-5p X - 12760734 12760788 3'utr CG12717 FlyBase G50476.1 TTGGGAAACTGCAGGGTATTACCAATCAGCATTATACTCGACTCTAAGCCCACAC 27 12760763 0.921936057 7 19 171 0.769230769 1.477121255 0.307692308 0.407407407 0.58974359 27 9 0 30 X:12760734-12760788 6 36.5 5235 FBgn0030420 2125.08 87.28333333 134.6233333 0.017175824 0.418178346 0.271126848 8 8 8 0.01 dme-miR-282-5p 8mer-A1 AGAGGCTA X 12761082 12761089 - X_12761082_12761089_- 0.63790686 0.63790686 0.63790686 0 CG12717 FBtr0073704|FBtr0346120 12760876|12760640 12761297|12761297 X - 12761012 12761140 3'utr CG12717 FlyBase G67048.1 CATACACACATACAATCACCAAAAAGAGCAGTTCAGCCAACAAGACGATAAAGAGGCTACCTACTGGAGAGATAGAGACAGAGACAAAGACAGAGATCAGGATCACAGGATGAGCATGTTAGGCAGGAC 105 12761068 0.868430456 12 85 215 0.863247863 1.402261382 0.145299145 0.114285714 0.205128205 105 13 3 101 X:12761012-12761140 8 CG12717 FBtr0346120|FBtr0073704 12760640|12760876 12761297|12761297 AGAGGCTA 8mer-A1 dme-miR-282-5p X - 12761001 12761135 3'utr CG12717 FlyBase G50478.1 ACACATACAATCACCAAAAAGAGCAGTTCAGCCAACAAGACGATAAAGAGGCTACCTACTGGAGAGATAGAGACAGAGACAAAGACAGAGATCAGGATCACAGGATGAGCATGTTAGGCAGGACGAGGTGGATGT 56 12761068 0.99500798 10 49 110 0.894117647 1.579783597 0.094117647 0.392857143 0.6 56 8 1 76 X:12761001-12761135 8 29 5236 FBgn0030420 2125.08 87.28333333 134.6233333 0.013646545 0.332251289 0.215415852 -21 -21 -21 0.01 dme-miR-33-5p 6mer3-8 CAATGC X 12761223 12761228 - X_12761223_12761228_- 1 1 1 0 CG12717 FBtr0073704|FBtr0346120 12760876|12760640 12761297|12761297 X - 12761167 12761258 3'utr CG12717 FlyBase G67049.1 AAAACAACTGAACTGAAGACGATCGCAACGCAATGCTTTGGAACACTAGGAGGAGCAAATTGACACGGCGGAGATGGGTTCACCAGAAATAT 10 12761224 0.933125422 7 9 31 0.928571429 1.113943352 0.214285714 0.4 0.571428571 10 1 0 13 X:12761167-12761258 6 CG12717 FBtr0346120|FBtr0073704 12760640|12760876 12761297|12761297 CAATGC 6mer3-8 dme-miR-33-5p X - 12761215 12761243 3'utr CG12717 FlyBase G50479.1 AAGACGATCGCAACGCAATGCTTTGGAAC 6 12761223 0.644332462 3 5 16 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 X:12761215-12761243 6 4.5 5237 FBgn0030420 2125.08 87.28333333 134.6233333 0.002117567 0.051556234 0.033426598 -4 -5 -4.5 0.01 dme-miR-14-3p 6mer2-7 AGACTG X 12773891 12773896 - X_12773891_12773896_- 1 1 1 0 CG32647 FBtr0346126|FBtr0340412 12771842|12773579 12776672|12776672 X - 12773861 12773921 3'utr CG32647 FlyBase G67059.1 CTTTGGGCTATATATCCTGCCTACCAGACTGGAAATTATTAATCTTTATTACTGATATTAA 6 12773886 0.993161703 4 4 52 0.571428571 0.602059991 0 0.166666667 0.285714286 6 3 0 4 X:12773861-12773921 6 CG32647 FBtr0340412|FBtr0346126 12773579|12771842 12776672|12776672 AGACTG 6mer2-7 dme-miR-14-3p X - 12773872 12773896 3'utr CG32647 FlyBase G50488.1 AGACTGGAAATTATTAATCTTTATT 4 12773884 0.97726209 2 3 25 0.857142857 0.77815125 0 0.5 0.714285714 4 1 0 6 X:12773872-12773896 6 3.5 5238 FBgn0052647 26.80666667 0.936666667 1.47 0.130564536 3.736654804 2.380952381 -10 -12 -11 0.01 dme-miR-33-5p 7mer-A1 AATGCAA X 12774351 12774357 - X_12774351_12774357_- 0.782911824 0.782911824 0.782911824 0 CG32647 FBtr0346126|FBtr0340412 12771842|12773579 12776672|12776672 X - 12774324 12774366 3'utr CG32647 FlyBase G67061.1 CAACTAACAAATGCAAATTGGCTTTAATTAACAACTAATAACG 10 12774348 0.882086712 2 10 79 1 1.113943352 0 0.3 0.461538462 10 0 0 13 X:12774324-12774366 7 CG32647 FBtr0340412|FBtr0346126 12773579|12771842 12776672|12776672 AATGCAA 7mer-A1 dme-miR-33-5p X - 12774326 12774359 3'utr CG32647 FlyBase G50489.1 CAAATGCAAATTGGCTTTAATTAACAACTAATAA 13 12774348 0.80955991 3 12 94 0.928571429 0.812913357 0 0.076923077 0.142857143 13 0 1 13 X:12774326-12774359 7 11 5239 FBgn0052647 26.80666667 0.936666667 1.47 0.410345685 11.74377224 7.482993197 -9 -9 -9 0.01 dme-miR-304-5p 7mer-m8 TGAGATT X 12774415 12774421 - X_12774415_12774421_- 0.620203442 0.620203442 0.620203442 0 CG32647 FBtr0346126|FBtr0340412 12771842|12773579 12776672|12776672 X - 12774401 12774448 3'utr CG32647 FlyBase G67062.1 CAATGAAAATGAGAATGAGAATGAGAATGAGATTGAGAATGGCAGATT 21 12774421 0.834650828 3 20 91 1 1.361727836 0.652173913 0.095238095 0.173913043 21 0 0 23 X:12774401-12774448 7 CG32647 FBtr0340412|FBtr0346126 12773579|12771842 12776672|12776672 TGAGATT 7mer-m8 dme-miR-304-5p X - 12774386 12774439 3'utr CG32647 FlyBase G50490.1 TGAGAATGAGAATGAGAATGAGATTGAGAATGGCAGATTCGAAGCGCGCTTAAC 7 12774422 0.95822981 4 7 34 1 1.041392685 0.272727273 0.571428571 0.727272727 7 0 0 11 X:12774386-12774439 7 13 5240 FBgn0052647 26.80666667 0.936666667 1.47 0.484953992 13.87900356 8.843537415 0 1 0.5 0.01 dme-miR-1008-3p 7mer-A1 GCTGTGA X 12774791 12774797 - X_12774791_12774797_- 0.823342497 0.823342081 0.823342289 2.83E-07 CG32647 FBtr0346126|FBtr0340412 12771842|12773579 12776672|12776672 X - 12774770 12774891 3'utr CG32647 FlyBase G67064.1 ATTTTTTTCCACTTGACAGCACATCAAAGCAAATTAAATTTAACAATAAATACATATATAAAATGCGGGATATCCGAGAAAAACGTGGAGTACGGCTGTGAAATTATGTTTGCTTTAAAATA 43 12774801 0.980161692 13 36 262 0.826086957 1.102662342 0.347826087 0.069767442 0.130434783 43 6 2 38 X:12774770-12774891 7 CG32647 FBtr0340412|FBtr0346126 12773579|12771842 12776672|12776672 GCTGTGA 7mer-A1 dme-miR-1008-3p X - 12774762 12774816 3'utr CG32647 FlyBase G50491.1 GAGAAAAACGTGGAGTACGGCTGTGAAATTATGTTTGCTTTAAAATACATAAACG 22 12774803 0.983087058 5 15 117 0.636363636 1.021189299 0.363636364 0.272727273 0.515151515 22 11 1 21 X:12774762-12774816 7 25.5 5241 FBgn0052647 26.80666667 0.936666667 1.47 0.951255906 27.22419929 17.34693878 4 6 5 0.01 dme-bantam-3p 6mer2-7 GATCTC X 12775110 12775115 - X_12775110_12775115_- 1 1 1 0 CG32647 FBtr0346126|FBtr0340412 12771842|12773579 12776672|12776672 X - 12775063 12775131 3'utr CG32647 FlyBase G67065.1 CCCTTCAAGAAGAATAGATCTCGTTTCAACTTTAGGCTAATGACTCTGAAGCCATCTCCGTCTCTTTCT 54 12775108 0.975407675 7 52 329 0.970588235 1.819543936 0.058823529 0.222222222 0.382352941 54 2 0 66 X:12775063-12775131 6 CG32647 FBtr0340412|FBtr0346126 12773579|12771842 12776672|12776672 GATCTC 6mer2-7 dme-bantam-3p X - 12775058 12775128 3'utr CG32647 FlyBase G50492.1 TTCAAGAAGAATAGATCTCGTTTCAACTTTAGGCTAATGACTCTGAAGCCATCTCCGTCTCTTTCTATATA 31 12775108 0.975685273 5 30 194 0.975 1.591064607 0.025 0.258064516 0.425 31 1 0 39 X:12775058-12775128 6 39.5 5242 FBgn0052647 26.80666667 0.936666667 1.47 1.473514051 42.17081851 26.8707483 -7 -7 -7 0.01 dme-miR-190-5p 8mer-m1 ACATATCT X 12775537 12775544 - X_12775537_12775544_- 0.577627638 0.577627638 0.577627638 0 CG32647 FBtr0073702|FBtr0346126|FBtr0340412 12775494|12771842|12773579 12776672|12776672|12776672 X - 12775523 12775594 3'utr CG32647 FlyBase G67067.1 AGTGCGACAAAAAAAATCTCGATCTTAGTAATGGGTAGTAAATTACACATACATATCTTGGCAACATTTTTT 8 12775554 0.974486249 7 8 42 1 1 0.4 0.25 0.4 8 0 0 10 X:12775523-12775594 8 CG32647 FBtr0340412|FBtr0346126|FBtr0073702 12773579|12771842|12775494 12776672|12776672|12776672 ACATATCT 8mer-m1 dme-miR-190-5p X - 12775530 12775574 3'utr CG32647 FlyBase G50494.1 GATCTTAGTAATGGGTAGTAAATTACACATACATATCTTGGCAAC 5 12775537 0.962302616 2 4 28 1 0.698970004 0.2 0 0 5 0 0 5 X:12775530-12775574 8 3.5 5243 FBgn0052647 26.80666667 0.936666667 1.47 0.130564536 3.736654804 2.380952381 10 -7 1.5 0.01 dme-miR-14-3p 6mer3-8 AAGACT X 12776075 12776080 - X_12776075_12776080_- 1 1 1 0 CG32647 FBtr0073702|FBtr0346126|FBtr0340412 12775494|12771842|12773579 12776672|12776672|12776672 X - 12776069 12776119 3'utr CG32647 FlyBase G67071.1 AACTCATCAAGCGAACGTATAAGACAGTCTCTAGCTCCTAAGACTCTATAG 10 12776101 0.921600527 6 10 40 1 1.113943352 0.153846154 0.3 0.461538462 10 0 0 13 X:12776069-12776119 6 CG32647 FBtr0340412|FBtr0346126|FBtr0073702 12773579|12771842|12775494 12776672|12776672|12776672 AAGACT 6mer3-8 dme-miR-14-3p X - 12776068 12776119 3'utr CG32647 FlyBase G50496.1 AACTCATCAAGCGAACGTATAAGACAGTCTCTAGCTCCTAAGACTCTATAGT 6 12776084 0.971754644 5 5 25 0.75 0.77815125 0.25 0.333333333 0.5 6 2 0 6 X:12776068-12776119 6 3.5 5244 FBgn0052647 26.80666667 0.936666667 1.47 0.130564536 3.736654804 2.380952381 21 4 12.5 0.01 dme-miR-1012-3p 6mer3-8 TTGACT X 12791334 12791339 - X_12791334_12791339_- 1 0.945483818 0.972741909 0.038548775 Pde9 FBtr0299635|FBtr0333525|FBtr0330395|FBtr0333524 12791138|12785561|12791138|12791138 12791754|12791754|12791463|12791754 X - 12791311 12791349 3'utr Pde9 FlyBase G67076.1 TTCACAGTCATTGACTTTTGCCTGGTAGCTTAGGTTTAC 22 12791332 0.679820463 5 21 198 0.928571429 1.414973348 0.035714286 0.272727273 0.428571429 22 2 0 26 X:12791311-12791349 6 Pde9 FBtr0299635|FBtr0333525|FBtr0330395|FBtr0333524 12791138|12785561|12791138|12791138 12791754|12791754|12791463|12791754 TTGACT 6mer3-8 dme-miR-1012-3p X - 12791264 12791347 3'utr Pde9 FlyBase G50497.1 CACAGTCATTGACTTTTGCCTGGTAGCTTAGGTTTACGTTTAACTCCTAGCAAATTACATTAGGTTTCCACTGATTTTACTCTC 20 12791332 0.867256915 9 20 180 1 1.505149978 0 0.35 0.59375 20 0 0 32 X:12791264-12791347 6 17.5 5245 FBgn0259171 464.15 8.2 12.59333333 0.037703329 2.134146341 1.38962414 -7 -7 -7 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT X 12911753 12911758 + X_12911753_12911758_+ 1 1 1 0 CG4645 FBtr0343649|FBtr0346316|FBtr0073692 12911708|12911708|12911708 12911897|12912070|12911897 X + 12911722 12911763 3'utr CG4645 FlyBase G60994.1 GAGAAACCAGTTCGTCAACGTCGCTGAACTAAGCTGTAAATT 5 12911733 0.91649001 5 5 29 1 0.698970004 0 0 0 5 0 0 5 X:12911722-12911763 6 CG4645 FBtr0346316 12911708 12912070 AGCTGT 6mer3-8 dme-miR-1008-3p X + 12911708 12911758 stop_codon CG4645 FlyBase G46056.1 AGGATGCATTCCGCGAGAAACCAGTTCGTCAACGTCGCTGAACTAAGCTGT 8 12911745 0.975208718 6 6 38 0.833333333 1 0.083333333 0.25 0.5 8 2 0 10 X:12911708-12911758 6 3 5246 FBgn0030435 142.39 10.84666667 16.51 0.021068895 0.276582667 0.181708056 20 8 14 0.01 dme-miR-932-5p 6mer3-8 GGAATT X 13079531 13079536 - X_13079531_13079536_- 1 1 1 0 hep FBtr0340303|FBtr0330396 13079203|13079203 13080428|13080401 X - 13079506 13079597 3'utr hep FlyBase G67100.1 TAAACATCAACTTGTATGCTGAGTGGAAGGGAAACCGACAAGAAACAACCACATTAACAATGGAATTATTGTACTGATTATTATAATTGTTT 91 13079529 0.991347451 14 84 949 0.916666667 1.694605199 0.148148148 0.142857143 0.277777778 91 8 1 99 X:13079506-13079597 6 hep FBtr0340303|FBtr0330396 13079203|13079203 13080428|13080401 GGAATT 6mer3-8 dme-miR-932-5p X - 13079506 13079539 3'utr hep FlyBase G50511.1 AATGGAATTATTGTACTGATTATTATAATTGTTT 63 13079530 0.719817724 8 59 707 0.964705882 1.612783857 0.105882353 0.26984127 0.458823529 63 2 1 82 X:13079506-13079539 6 71.5 5247 FBgn0010303 1946.036667 56.33 86.79333333 0.036741343 1.269305876 0.82379599 -7 -6 -6.5 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA X 13080078 13080083 - X_13080078_13080083_- 1 1 1 0 hep FBtr0340303|FBtr0330396|FBtr0330397|FBtr0073747 13079203|13079203|13079729|13079729 13080428|13080401|13084554|13080428 X - 13080041 13080109 3'utr hep FlyBase G67103.1 GAGCTGGATATCCGTGGACATGTGATTGATGACAAACGAAAGTGTTCAAAAGTCTTATACGTTTAAGTG 20 13080083 0.974423176 4 19 120 0.96 1.079181246 0.32 0.25 0.4 20 0 1 24 X:13080041-13080109 6 hep FBtr0330397|FBtr0073747|FBtr0340303|FBtr0330396 13079729|13079729|13079203|13079203 13084554|13080428|13080428|13080401 TGATGA 6mer3-8 dme-miR-2a-2-5p X - 13080066 13080120 3'utr hep FlyBase G50514.1 ATCGACGACCAGAGCTGGATATCCGTGGACATGTGATTGATGACAAACGAAAGTG 15 13080083 0.976702792 6 14 96 1 1.414973348 0.307692308 0.533333333 0.730769231 15 0 0 26 X:13080066-13080120 6 16 5248 FBgn0010303 1946.036667 56.33 86.79333333 0.008221839 0.284040476 0.184345956 0 0 0 0.01 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 13081902 13081909 - X_13081902_13081909_- 0.63113665 0.63113665 0.63113665 0 hep FBtr0330397 13079729 13084554 X - 13081888 13081925 5'utr hep FlyBase G67104.1 ATCAACGCACTCCACCTCTAGTCAGTCCTCCACGCAGT 42 13081900 0.696249877 3 40 212 0.957446809 1.653212514 0.106382979 0.095238095 0.191489362 42 2 0 45 X:13081888-13081925 8 hep FBtr0330397 13079729 13084554 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X - 13081891 13081923 5'utr hep FlyBase G50515.1 CAACGCACTCCACCTCTAGTCAGTCCTCCACGC 19 13081900 0.734519201 4 19 94 1 1.51851394 0.121212121 0.421052632 0.666666667 19 0 0 33 X:13081891-13081923 8 30.5 5249 FBgn0010303 1946.036667 56.33 86.79333333 0.01567288 0.541452157 0.351409478 -9 -9 -9 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 13082443 13082448 - X_13082443_13082448_- 1 1 1 0 hep FBtr0330397 13079729 13084554 X - 13082414 13082474 5'utr hep FlyBase G67106.1 AACAACAATACCACTGCCGCACAACAACCAAACATTGATCACGGATGCAGCAACAGCAGCA 14 13082440 0.908901632 4 11 34 0.8125 1.113943352 0 0.142857143 0.25 14 3 0 13 X:13082414-13082474 6 hep FBtr0330397 13079729 13084554 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X - 13082405 13082460 5'utr hep FlyBase G50517.1 TGCCGCACAACAACCAAACATTGATCACGGATGCAGCAACAGCAGCAGCAGCGGCG 8 13082439 0.916582382 3 5 18 0.833333333 1 0 0.375 0.583333333 8 2 0 10 X:13082405-13082460 6 7 5250 FBgn0010303 1946.036667 56.33 86.79333333 0.003597055 0.124267708 0.080651356 -8 -9 -8.5 0.01 dme-miR-184-5p 6mer3-8 TGATAA X 13093894 13093899 + X_13093894_13093899_+ 1 1 1 0 lic FBtr0073720 13093377 13093986 X + 13093861 13093935 3'utr lic FlyBase G61003.1 AAGCATTGAATGTAAAAACGTACTAAACTTAAATGATAATTTGTGAACTTTTGAACACCAAAATAGTCGAAAAGA 7 13093901 0.989158966 5 6 53 1 1 0 0.428571429 0.6 7 0 0 10 X:13093861-13093935 6 lic FBtr0073720 13093377 13093986 TGATAA 6mer3-8 dme-miR-184-5p X + 13093856 13093922 3'utr lic FlyBase G46064.1 AAGCAAAGCATTGAATGTAAAAACGTACTAAACTTAAATGATAATTTGTGAACTTTTGAACACCAAA 8 13093909 0.966366118 5 6 39 1 1.041392685 0 0.375 0.545454545 8 0 0 11 X:13093856-13093922 6 4 5251 FBgn0261524 942.3333333 58.90333333 90.19666667 0.004244782 0.067907872 0.044347537 -7 -15 -11 0.01 dme-miR-276a-3p 7mer-m8 AGTTCCT X 13096754 13096760 - X_13096754_13096760_- 0.631524669 0.631524679 0.631524674 0 CG43313 FBtr0346130|FBtr0306847 13095569|13096114 13096817|13096817 X - 13096750 13096798 3'utr CG43313 FlyBase G67117.1 TTCCAGCTCCAGCTCCAGCTCCTGCCTGTAATATCATCAGTTCCTTTTT 16 13096776 0.933616838 5 16 102 1 1.230448921 0.058823529 0.0625 0.117647059 16 0 0 17 X:13096750-13096798 7 CG43313 FBtr0306847|FBtr0346130 13096114|13095569 13096817|13096817 AGTTCCT 7mer-m8 dme-miR-276a-3p X - 13096758 13096800 3'utr CG43313 FlyBase G50524.1 CTTTCCAGCTCCAGCTCCAGCTCCTGCCTGTAATATCATCAGT 12 13096775 0.755289752 4 12 88 1 1.361727836 0.086956522 0.5 0.739130435 12 0 0 23 X:13096758-13096800 2 1 5252 FBgn0263005 249.69 7.05 10.91 0.004004966 0.141843972 0.091659028 16 15 15.5 0.01 dme-miR-1003-3p 7mer-A1 TGTGAGA X 13123232 13123238 - X_13123232_13123238_- 0.823349562 0.823349562 0.823349562 0 CG32638 FBtr0300453 13122874 13123472 X - 13123132 13123255 3'utr CG32638 FlyBase G67119.1 TTTTGTTAGTGCAATATTGTGAGAGAGACAACGATTAAGGTTAAGCATTGTAGTTAAATACGGCATCGGAATTTCATAAAGAAACGTGTAGGTGCGTGTTTTCCTTGTCCCATATACACAAACC 23 13123239 0.981113858 9 19 142 0.875 1.322219295 0.25 0.043478261 0.083333333 23 3 0 21 X:13123132-13123255 7 CG32638 FBtr0300453 13122874 13123472 TGTGAGA 7mer-A1 dme-miR-1003-3p X - 13123186 13123248 3'utr CG32638 FlyBase G50525.1 AGTGCAATATTGTGAGAGAGACAACGATTAAGGTTAAGCATTGTAGTTAAATACGGCATCGGA 14 13123239 0.891319201 6 13 73 0.95 0.977723605 0.35 0.357142857 0.55 14 0 1 19 X:13123186-13123248 7 11.5 5253 FBgn0052638 822.99 64.44 99.11666667 0.013973438 0.178460583 0.116024886 1 1 1 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA X 13123358 13123364 - X_13123358_13123364_- 0.82334903 0.823349113 0.823349072 7.07E-08 CG32638 FBtr0300453 13122874 13123472 X - 13123321 13123436 3'utr CG32638 FlyBase G67120.1 ACACCACTACGATAATAGACAGCGGATTCCGCAATGGAACAGCAAAGACAACCCATGTGTAGAAAGACTTGACTAGTCAGTGTCGCTGCCGAAAGTAATCAGAATATTTGAATGCG 68 13123368 0.970191694 12 66 376 0.976190476 1.612783857 0.19047619 0.147058824 0.30952381 68 1 1 82 X:13123321-13123436 7 CG32638 FBtr0300453 13122874 13123472 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X - 13123331 13123391 3'utr CG32638 FlyBase G50526.1 AGACAACCCATGTGTAGAAAGACTTGACTAGTCAGTGTCGCTGCCGAAAGTAATCAGAATA 49 13123368 0.783315048 6 48 282 0.963855422 1.903089987 0.228915663 0.367346939 0.626506024 49 3 0 80 X:13123331-13123391 7 51 5254 FBgn0052638 822.99 64.44 99.11666667 0.061969161 0.791433892 0.514545149 4 4 4 0.01 dme-miR-932-5p 6mer2-7 GAATTG X 13130245 13130250 + X_13130245_13130250_+ 1 1 1 0 CG15717 FBtr0344608|FBtr0073723 13129976|13129976 13130290|13130290 X + 13130210 13130268 3'utr CG15717 FlyBase G61011.1 TATTCCAATTGTATTGCGAAAAGGTCCTTGAGTCTGAATTGTTTTTTTGATACTCTGTC 15 13130238 0.800488117 5 13 133 0.777777778 1.146128036 0.388888889 0.133333333 0.277777778 15 4 0 14 X:13130210-13130268 6 CG15717 FBtr0073723|FBtr0344608 13129976|13129976 13130290|13130290 GAATTG 6mer2-7 dme-miR-932-5p X + 13130211 13130253 3'utr CG15717 FlyBase G46073.1 ATTCCAATTGTATTGCGAAAAGGTCCTTGAGTCTGAATTGTTT 9 13130238 0.980641142 3 8 62 1 1 0.5 0.111111111 0.2 9 0 0 10 X:13130211-13130253 6 11 5255 FBgn0030451 195.7633333 20.76333333 31.87333333 0.056190298 0.529780061 0.345116085 7 7 7 0.01 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA X 13134356 13134362 + X_13134356_13134362_+ 0.823349562 0.82309625 0.823222906 0.000179181 CG15717 FBtr0339676 13129976 13134565 X + 13134274 13134385 3'utr CG15717 FlyBase G61016.1 CATCAATCATCGCGAGACTCTGACACAGTGGCATCTGGTCTTCTGGCTGGCGGCGGGCTTGAATATAGCCGGTAACTTCATCTACCTGATCTTCGCCAGCGCCGAGGAGCAA 39 13134354 0.983614642 12 37 285 0.953488372 1.311753861 0.302325581 0.102564103 0.186046512 39 1 1 41 X:13134274-13134385 7 CG15717 FBtr0339676 13129976 13134565 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" X + 13134300 13134382 3'utr CG15717 FlyBase G46077.1 AGTGGCATCTGGTCTTCTGGCTGGCGGCGGGCTTGAATATAGCCGGTAACTTCATCTACCTGATCTTCGCCAGCGCCGAGGAG 19 13134354 0.98484249 9 17 136 0.892857143 1.397940009 0.535714286 0.368421053 0.571428571 19 3 0 25 X:13134300-13134382 7 22.5 5256 FBgn0030451 195.7633333 20.76333333 31.87333333 0.1149347 1.083641034 0.705919264 2 2 2 0.01 dme-miR-999-3p 6mer2-7 GTTAAC X 13134635 13134640 + X_13134635_13134640_+ 1 1 1 0 MFS10 FBtr0339677 13134435 13134839 X + 13134594 13134656 3'utr MFS10 FlyBase G61019.1 GAAACTAGTGCTACCAAATCGGAATGGAAAATCGAAAGGATGTTAACTGTTTTAGTGTATTAT 12 13134618 0.900689136 7 12 69 1 1.146128036 0.428571429 0.166666667 0.285714286 12 0 0 14 X:13134594-13134656 6 MFS10 FBtr0339677 13134435 13134839 GTTAAC 6mer2-7 dme-miR-999-3p X + 13134590 13134690 3'utr MFS10 FlyBase G46079.1 GAACGAAACTAGTGCTACCAAATCGGAATGGAAAATCGAAAGGATGTTAACTGTTTTAGTGTATTATATACGTGTATCGTCCTTTTATATGGACTTTTGTT 15 13134635 0.989506652 10 14 126 0.954545455 1.322219295 0 0.333333333 0.545454545 15 1 0 21 X:13134590-13134690 6 6 5257 FBgn0030452 712.7033333 29.94 45.85666667 0.00841865 0.200400802 0.13084248 17 0 8.5 0.01 dme-miR-282-5p 6mer3-8 AGAGGC X 13195603 13195608 - X_13195603_13195608_- 1 1 1 0 sno FBtr0340488|FBtr0340489 13195497|13195497 13196279|13196279 X - 13195588 13195632 3'utr sno FlyBase G67136.1 TGTAAGTTTAACCAACAGACATTGAGAGGCATCTGAATATAAGTT 14 13195610 0.624036428 4 13 66 1 1.255272505 0 0.214285714 0.388888889 14 0 0 18 X:13195588-13195632 6 sno FBtr0340488|FBtr0340489 13195497|13195497 13196279|13196279 AGAGGC 6mer3-8 dme-miR-282-5p X - 13195582 13195629 3'utr sno FlyBase G50540.1 AAGTTTAACCAACAGACATTGAGAGGCATCTGAATATAAGTTAAGAAA 10 13195610 0.954004645 3 10 51 1 1.176091259 0 0.4 0.6 10 0 0 15 X:13195582-13195629 6 11.5 5258 FBgn0265630 1551.576667 31.13333333 47.87666667 0.007411816 0.369379015 0.240200515 2 2 2 0.01 dme-miR-965-3p 7mer-A1 ACGCTTA X 13195853 13195859 - X_13195853_13195859_- 0.823349562 0.823349562 0.823349562 0 sno FBtr0340488|FBtr0340489 13195497|13195497 13196279|13196279 X - 13195822 13195879 3'utr sno FlyBase G67137.1 ATATAGAGAACGAAATGTAAACGCTTATAAATGGACTTTTCTCAATGATTTAATGATT 253 13195848 0.811824095 9 247 2016 0.97740113 2.238046103 0.774011299 0.320158103 0.514124294 253 7 1 346 X:13195822-13195879 7 sno FBtr0340488|FBtr0340489 13195497|13195497 13196279|13196279 ACGCTTA 7mer-A1 dme-miR-965-3p X - 13195819 13195982 3'utr sno FlyBase G50541.1 TGTACAACCATAAACCCATCCATCAGACTTTGGCTCGTTATAGTTCATAGAAACACCACACTCACATACTGACACACGCGCAACGTACAGATGATATGATGACATATAGAGAACGAAATGTAAACGCTTATAAATGGACTTTTCTCAATGATTTAATGATTAAT 240 13195848 0.985028554 24 235 1897 0.979289941 2.519827994 0.639053254 0.3 0.50295858 240 7 0 331 X:13195819-13195982 7 227 5259 FBgn0265630 1551.576667 31.13333333 47.87666667 0.146302793 7.291220557 4.7413493 -11 -11 -11 0.01 dme-miR-970-3p 6mer3-8 TCTTAT X 13263897 13263902 - X_13263897_13263902_- 1 1 1 0 HDAC4 FBtr0308576|FBtr0333331|FBtr0301299|FBtr0073798|FBtr0301298|FBtr0333333|FBtr0333332|FBtr0333334 13263753|13262685|13263753|13263753|13262887|13262887|13262887|13262887 13264981|13264981|13264981|13264981|13264981|13264981|13264981|13264981 X - 13263866 13263924 3'utr HDAC4 FlyBase G67159.1 TTGTTGTTAAATGTTGCCGAGATCTTATATACGTATGTATACCTAATAACTGTTACAAT 20 13263911 0.754431872 6 20 189 1 1.322219295 0.523809524 0.05 0.095238095 20 0 0 21 X:13263866-13263924 6 HDAC4 FBtr0333334|FBtr0333332|FBtr0333333|FBtr0301298|FBtr0073798|FBtr0301299|FBtr0333331|FBtr0308576 13262887|13262887|13262887|13262887|13263753|13263753|13262685|13263753 13264981|13264981|13264981|13264981|13264981|13264981|13264981|13264981 TCTTAT 6mer3-8 dme-miR-970-3p X - 13263867 13263925 3'utr HDAC4 FlyBase G50549.1 TTTGTTGTTAAATGTTGCCGAGATCTTATATACGTATGTATACCTAATAACTGTTACAA 18 13263911 0.98392256 8 18 149 1 1.380211242 0.208333333 0.333333333 0.5 18 0 0 24 X:13263867-13263925 6 16.5 5260 FBgn0041210 5130.7 102.1166667 156.9133333 0.003215935 0.161579892 0.105153588 9 9 9 0.01 dme-miR-92b-3p 8mer-A1 GTGCAATA X 13263983 13263990 - X_13263983_13263990_- 0.628916032 0.628916032 0.628916032 0 HDAC4 FBtr0308576|FBtr0333331|FBtr0301299|FBtr0073798|FBtr0301298|FBtr0333333|FBtr0333332|FBtr0333334 13263753|13262685|13263753|13263753|13262887|13262887|13262887|13262887 13264981|13264981|13264981|13264981|13264981|13264981|13264981|13264981 X - 13263968 13264002 3'utr HDAC4 FlyBase G67160.1 AAAATATATATTGTGCAATAAATGTGAGAAAATGA 6 13263991 0.724042958 4 6 35 1 0.77815125 0.333333333 0 0 6 0 0 6 X:13263968-13264002 8 HDAC4 FBtr0333334|FBtr0333332|FBtr0333333|FBtr0301298|FBtr0073798|FBtr0301299|FBtr0333331|FBtr0308576 13262887|13262887|13262887|13262887|13263753|13263753|13262685|13263753 13264981|13264981|13264981|13264981|13264981|13264981|13264981|13264981 GTGCAATA 8mer-A1 dme-miR-92b-3p X - 13263970 13264004 3'utr HDAC4 FlyBase G50550.1 AAAAAATATATATTGTGCAATAAATGTGAGAAAAT 5 13263992 0.901998704 3 5 37 1 0.903089987 0 0.4 0.625 5 0 0 8 X:13263970-13264004 8 5.5 5261 FBgn0041210 5130.7 102.1166667 156.9133333 0.001071978 0.053859964 0.035051196 1 2 1.5 0.01 dme-miR-305-5p 7mer-m8 AGTACAA X 13264060 13264066 - X_13264060_13264066_- 0.643267584 0.643267584 0.643267584 0 HDAC4 FBtr0308576|FBtr0333331|FBtr0301299|FBtr0073798|FBtr0301298|FBtr0333333|FBtr0333332|FBtr0333334 13263753|13262685|13263753|13263753|13262887|13262887|13262887|13262887 13264981|13264981|13264981|13264981|13264981|13264981|13264981|13264981 X - 13264053 13264108 3'utr HDAC4 FlyBase G67161.1 GAGAAATCTTTTTGTACAATTTATAGTTTAGTGCAAGTTTCAAGTACAACATGCTA 9 13264057 0.982605322 5 8 71 0.909090909 1 0.090909091 0.222222222 0.363636364 9 1 0 10 X:13264053-13264108 7 HDAC4 FBtr0333334|FBtr0333332|FBtr0333333|FBtr0301298|FBtr0073798|FBtr0301299|FBtr0333331|FBtr0308576 13262887|13262887|13262887|13262887|13263753|13263753|13262685|13263753 13264981|13264981|13264981|13264981|13264981|13264981|13264981|13264981 AGTACAA 7mer-m8 dme-miR-305-5p X - 13264041 13264108 3'utr HDAC4 FlyBase G50551.1 GAGAAATCTTTTTGTACAATTTATAGTTTAGTGCAAGTTTCAAGTACAACATGCTATTATTTAAAGAA 15 13264057 0.980721206 6 15 121 1 1.301029996 0.3 0.266666667 0.45 15 0 0 20 X:13264041-13264108 7 7.5 5262 FBgn0041210 5130.7 102.1166667 156.9133333 0.001461789 0.073445406 0.047797085 -9 -9 -9 0.01 dme-miR-980-5p 7mer-m1 AAAAACT X 13264145 13264151 - X_13264145_13264151_- 0.765586663 0.765586663 0.765586663 0 HDAC4 FBtr0308576|FBtr0333331|FBtr0301299|FBtr0073798|FBtr0301298|FBtr0333333|FBtr0333332|FBtr0333334 13263753|13262685|13263753|13263753|13262887|13262887|13262887|13262887 13264981|13264981|13264981|13264981|13264981|13264981|13264981|13264981 X - 13264115 13264221 3'utr HDAC4 FlyBase G67162.1 CAGAGATCGAGTGGGGAGTTGATTACATGTTATGTAGAATGCTTTAGTTGATAATAAGATATGAGAAAAAAAAAACTTAACAACTAACTAGTTGGATGAAAAGCGAA 34 13264144 0.972348381 12 31 200 0.904761905 1.579783597 0.238095238 0.235294118 0.380952381 34 4 0 38 X:13264115-13264221 7 HDAC4 FBtr0333334|FBtr0333332|FBtr0333333|FBtr0301298|FBtr0073798|FBtr0301299|FBtr0333331|FBtr0308576 13262887|13262887|13262887|13262887|13263753|13263753|13262685|13263753 13264981|13264981|13264981|13264981|13264981|13264981|13264981|13264981 AAAAACT 7mer-m1 dme-miR-980-5p X - 13264124 13264223 3'utr HDAC4 FlyBase G50552.1 TACAGAGATCGAGTGGGGAGTTGATTACATGTTATGTAGAATGCTTTAGTTGATAATAAGATATGAGAAAAAAAAAACTTAACAACTAACTAGTTGGATG 16 13264144 0.884821911 11 15 81 1 1.462397998 0.172413793 0.5625 0.75862069 16 0 0 29 X:13264124-13264223 7 10.5 5263 FBgn0041210 5130.7 102.1166667 156.9133333 0.002046504 0.102823568 0.06691592 -7 -7 -7 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG X 13264626 13264631 - X_13264626_13264631_- 1 0.999999998 0.999999999 0 HDAC4 FBtr0308576|FBtr0333331|FBtr0301299|FBtr0073798|FBtr0301298|FBtr0333333|FBtr0333332|FBtr0333334 13263753|13262685|13263753|13263753|13262887|13262887|13262887|13262887 13264981|13264981|13264981|13264981|13264981|13264981|13264981|13264981 X - 13264591 13264685 3'utr HDAC4 FlyBase G67164.1 TATAGGGGAACATGTCTAAAAGAAGCAGAACAGGGCCTAAAGTTCAAAATGGTGGCTGTGCCTCCAAAAGAAGAAATAATTATAATAATTAGAAA 136 13264633 0.970814674 8 135 778 0.993506494 1.883661435 0.116883117 0.125 0.227272727 136 0 1 153 X:13264591-13264685 6 HDAC4 FBtr0333334|FBtr0333332|FBtr0333333|FBtr0301298|FBtr0073798|FBtr0301299|FBtr0333331|FBtr0308576 13262887|13262887|13262887|13262887|13263753|13263753|13262685|13263753 13264981|13264981|13264981|13264981|13264981|13264981|13264981|13264981 GCTGTG 6mer2-7 dme-miR-1008-3p X - 13264592 13264659 3'utr HDAC4 FlyBase G50556.1 AGAACAGGGCCTAAAGTTCAAAATGGTGGCTGTGCCTCCAAAAGAAGAAATAATTATAATAATTAGAA 71 13264633 0.972695453 6 66 394 0.942307692 1.514104821 0.067307692 0.338028169 0.548076923 71 4 2 98 X:13264592-13264659 6 97.5 5264 FBgn0041210 5130.7 102.1166667 156.9133333 0.019003255 0.954790273 0.621362111 2 2 2 0.01 dme-miR-307a-3p 6mer2-7 GTTGTG X 13264816 13264821 - X_13264816_13264821_- 0.999267836 0.999950103 0.99960897 0.000482459 HDAC4 FBtr0308576|FBtr0333331|FBtr0301299|FBtr0073798|FBtr0301298|FBtr0333333|FBtr0333332|FBtr0333334 13263753|13262685|13263753|13263753|13262887|13262887|13262887|13262887 13264981|13264981|13264981|13264981|13264981|13264981|13264981|13264981 X - 13264744 13264883 3'utr HDAC4 FlyBase G67165.1 CAAGCTGCTCAATGCACATTTAGTTATTTGTTGTAGTTGAATTGATTGTTGTTGCTGTTGTTGTTGTGGCGCTCGCTTGCAATTGTTGTCGTTGTCATTGATCGTCTATAGCCACATCTATCTCTCTCACTCGATCGATT 24 13264840 0.99130223 18 24 251 1 1.505149978 0.1875 0.208333333 0.40625 24 0 0 32 X:13264744-13264883 6 HDAC4 FBtr0333334|FBtr0333332|FBtr0333333|FBtr0301298|FBtr0073798|FBtr0301299|FBtr0333331|FBtr0308576 13262887|13262887|13262887|13262887|13263753|13263753|13262685|13263753 13264981|13264981|13264981|13264981|13264981|13264981|13264981|13264981 GTTGTG 6mer2-7 dme-miR-307a-3p X - 13264747 13264905 3'utr HDAC4 FlyBase G50557.1 ATGGCAGGAGGGGGCGTGGCCGCAAGCTGCTCAATGCACATTTAGTTATTTGTTGTAGTTGAATTGATTGTTGTTGCTGTTGTTGTTGTGGCGCTCGCTTGCAATTGTTGTCGTTGTCATTGATCGTCTATAGCCACATCTATCTCTCTCACTCGATCG 21 13264833 0.992621045 13 17 203 0.771428571 1.431363764 0.342857143 0.428571429 0.657142857 21 8 0 27 X:13264747-13264905 6 6 5265 FBgn0041210 5130.7 102.1166667 156.9133333 0.001169431 0.058756324 0.038237668 19 12 15.5 0.01 dme-miR-980-3p 6mer3-8 GGCAGC X 13287558 13287563 + X_13287558_13287563_+ 1 1 1 0 CG15743 FBtr0346123|FBtr0333330|FBtr0073755 13287493|13287493|13287493 13287741|13287741|13287741 X + 13287535 13287584 3'utr CG15743 FlyBase G61049.1 AATCCCCTCGCCCACATCGTTTAGGCAGCATTCAAAAATAGCTTTAAGTT 41 13287556 0.770775241 6 40 263 0.97826087 1.653212514 0.043478261 0.097560976 0.195652174 41 1 0 45 X:13287535-13287584 6 CG15743 FBtr0073755|FBtr0333330|FBtr0346123 13287493|13287493|13287493 13287741|13287741|13287741 GGCAGC 6mer3-8 dme-miR-980-3p X + 13287516 13287577 3'utr CG15743 FlyBase G46096.1 TTCTAACCCTTCCCGAGGAAATCCCCTCGCCCACATCGTTTAGGCAGCATTCAAAAATAGCT 29 13287556 0.978587066 5 29 184 1 1.69019608 0 0.448275862 0.673469388 29 0 0 49 X:13287516-13287577 6 33 5266 FBgn0030465 244.6633333 20.01333333 30.50666667 0.134879222 1.648900733 1.081730769 2 2 2 0.01 dme-miR-307a-3p 7mer-m8 GGTTGTG X 13287661 13287667 + X_13287661_13287667_+ 0.702972035 0.702972035 0.702972035 0 CG15743 FBtr0346123|FBtr0333330|FBtr0073755 13287493|13287493|13287493 13287741|13287741|13287741 X + 13287652 13287686 3'utr CG15743 FlyBase G61050.1 AATTACGTTGGTTGTGCGGCGGCGCGGCGGGGTCA 19 13287660 0.712804762 2 17 115 0.818181818 1.255272505 0.318181818 0.105263158 0.227272727 19 4 0 18 X:13287652-13287686 7 CG15743 FBtr0073755|FBtr0333330|FBtr0346123 13287493|13287493|13287493 13287741|13287741|13287741 GGTTGTG 7mer-m8 dme-miR-307a-3p X + 13287652 13287711 3'utr CG15743 FlyBase G46098.1 AATTACGTTGGTTGTGCGGCGGCGCGGCGGGGTCATGAACCCGGACCAAACCAAACCGCC 12 13287660 0.966796712 2 12 62 1 1.230448921 0.352941176 0.25 0.470588235 12 0 0 17 X:13287652-13287711 7 14.5 5267 FBgn0030465 244.6633333 20.01333333 30.50666667 0.059265113 0.724516989 0.475305944 1 1 1 0.01 dme-miR-8-3p 6mer2-7 AGTATT X 13294024 13294029 + X_13294024_13294029_+ 1 0.999999903 0.999999951 7.07E-08 CG15744 FBtr0073756 13293877 13294433 X + 13294009 13294071 3'utr CG15744 FlyBase G61055.1 ACGTGCCAGTCCCAAAGTATTTTAGTACCAAGATGTGTACCCAACCCACTGACCCTCGCCAAT 27 13294043 0.783734303 7 24 130 0.857142857 1.176091259 0.171428571 0.185185185 0.371428571 27 4 1 30 X:13294009-13294071 6 CG15744 FBtr0073756 13293877 13294433 AGTATT 6mer2-7 dme-miR-8-3p X + 13294008 13294069 3'utr CG15744 FlyBase G46101.1 AACGTGCCAGTCCCAAAGTATTTTAGTACCAAGATGTGTACCCAACCCACTGACCCTCGCCA 13 13294030 0.740457602 6 13 70 1 1.255272505 0.222222222 0.384615385 0.555555556 13 0 0 18 X:13294008-13294069 6 8 5268 FBgn0030466 1200.416667 23.08666667 35.35 0.006664353 0.346520358 0.226308345 -19 -6 -12.5 0.01 dme-miR-1012-3p 6mer2-7 TGACTA X 13294202 13294207 + X_13294202_13294207_+ 0.999999995 1 0.999999997 0 CG15744 FBtr0073756 13293877 13294433 X + 13294088 13294221 3'utr CG15744 FlyBase G61056.1 ATATATATATATATGTATATATATGGGCAGTGGGCTTATATCTTAAGTTTCGCCCACTTAAAACCTAGCCAGCTAACTGAACTTGTAATTATAGTAAGGACTCCCTATTTATTATGACTAGTATTACTCCACAA 26 13294172 0.981870038 15 26 202 1 1.462397998 0.103448276 0.115384615 0.206896552 26 0 0 29 X:13294088-13294221 6 CG15744 FBtr0073756 13293877 13294433 TGACTA 6mer2-7 dme-miR-1012-3p X + 13294125 13294215 3'utr CG15744 FlyBase G46102.1 ATATCTTAAGTTTCGCCCACTTAAAACCTAGCCAGCTAACTGAACTTGTAATTATAGTAAGGACTCCCTATTTATTATGACTAGTATTACT 13 13294176 0.984352706 9 12 92 0.875 1.146128036 0.0625 0.230769231 0.375 13 2 0 14 X:13294125-13294215 6 5 5269 FBgn0030466 1200.416667 23.08666667 35.35 0.00416522 0.216575224 0.141442716 30 26 28 0.01 dme-miR-13b-2-5p 8mer-m1 TTTGACGC X 13294772 13294779 - X_13294772_13294779_- 0.618174508 0.618174508 0.618174508 0 CG1764 FBtr0339946|FBtr0073796 13294471|13294485 13294970|13294970 X - 13294706 13294872 3'utr CG1764 FlyBase G67187.1 CCCTGCTCTGTCCAGGCATCAGCAAAATTGTATTATCTTATTATAGTTTATACACACCATCTCTTGTTATTGTTACACAATTAAGATTAAACCTTTGACGCTAATCAAACTGATTGTCGCTGAGGCGTCGCTGCTGTTACTTTCCAGCTCATTGTTATTTTATAGGT 41 13294808 0.987971222 19 39 358 0.94 1.672097858 0.06 0.170731707 0.32 41 3 0 47 X:13294706-13294872 8 CG1764 FBtr0339946|FBtr0073796 13294471|13294485 13294970|13294970 TTTGACGC 8mer-m1 dme-miR-13b-2-5p X - 13294679 13294854 3'utr CG1764 FlyBase G50579.1 TCAGCAAAATTGTATTATCTTATTATAGTTTATACACACCATCTCTTGTTATTGTTACACAATTAAGATTAAACCTTTGACGCTAATCAAACTGATTGTCGCTGAGGCGTCGCTGCTGTTACTTTCCAGCTCATTGTTATTTTATAGGTTGTGTAATTCAATCAGAGTTGGAAAGT 32 13294758 0.982148016 12 30 233 0.955555556 1.633468456 0.066666667 0.3125 0.511111111 32 2 0 43 X:13294679-13294854 8 9 5270 FBgn0030467 288.8666667 25.22333333 38.49333333 0.031156243 0.356812475 0.23380672 29 -21 4 0.01 dme-miR-263a-5p 6mer2-7 TGCCAT X 13294919 13294924 - X_13294919_13294924_- 1 1 1 0 CG1764 FBtr0339946|FBtr0073796 13294471|13294485 13294970|13294970 X - 13294886 13294945 3'utr CG1764 FlyBase G67188.1 ACCGACCGGAGTGAGAAGCATTGCCATGAGAAACATGCACAACAGGCCCAAGGAGCAGGA 26 13294925 0.91769887 4 25 73 0.964285714 1.431363764 0.357142857 0.076923077 0.142857143 26 1 0 27 X:13294886-13294945 6 CG1764 FBtr0339946|FBtr0073796 13294471|13294485 13294970|13294970 TGCCAT 6mer2-7 dme-miR-263a-5p X - 13294886 13294943 3'utr CG1764 FlyBase G50580.1 CGACCGGAGTGAGAAGCATTGCCATGAGAAACATGCACAACAGGCCCAAGGAGCAGGA 11 13294925 0.916015605 2 10 32 0.923076923 1.079181246 0.461538462 0.181818182 0.307692308 11 1 0 12 X:13294886-13294943 6 17.5 5271 FBgn0030467 288.8666667 25.22333333 38.49333333 0.060581583 0.693802035 0.454624177 1 1 1 0.01 dme-miR-965-3p 6mer3-8 TACGCT X 13299842 13299847 + X_13299842_13299847_+ 1 1 1 0 CG1622 FBtr0073757|FBtr0310465|FBtr0339945 13299572|13298901|13297895 13299910|13299910|13299910 X + 13299821 13299861 3'utr CG1622 FlyBase G61063.1 TTTGTAATTTGTGACTACACTTACGCTGATAAAATAGTTTT 8 13299841 0.924473657 4 8 63 1 0.954242509 0 0.125 0.222222222 8 0 0 9 X:13299821-13299861 6 CG1622 FBtr0310465|FBtr0339945|FBtr0073757 13298901|13297895|13299572 13299910|13299910|13299910 TACGCT 6mer3-8 dme-miR-965-3p X + 13299781 13299861 3'utr CG1622 FlyBase G46105.1 CTAGACACAATCACATGCGGACACAGCAGCAAGGCTATATTTTGTAATTTGTGACTACACTTACGCTGATAAAATAGTTTT 10 13299841 0.973629031 5 10 60 1 1.113943352 0 0.3 0.461538462 10 0 0 13 X:13299781-13299861 6 7 5272 FBgn0030468 1094.686667 76.97333333 117.3766667 0.006394524 0.090940585 0.059637066 1 1 1 0.01 dme-miR-14-3p 8mer-A1 AAGACTGA X 13328933 13328940 + X_13328933_13328940_+ 0.643565469 0.643565469 0.643565469 0 IP3K2 FBtr0344168|FBtr0344171|FBtr0344170|FBtr0346133|FBtr0346134|FBtr0344169 13328764|13328764|13328764|13328764|13328764|13328764 13329069|13329303|13329303|13329303|13329303|13329303 X + 13328908 13328965 3'utr IP3K2 FlyBase G61091.1 ATTTAACCCCTTAAGTTTAAAATCAAAGACTGAAATCACAATATGCATACACATATTT 171 13328924 0.595304778 7 140 831 0.823232323 1.066059569 0.01010101 0.111111111 0.232323232 171 22 13 163 X:13328908-13328965 8 IP3K2 FBtr0344169|FBtr0346134|FBtr0346133|FBtr0344170|FBtr0344171|FBtr0344168 13328764|13328764|13328764|13328764|13328764|13328764 13329303|13329303|13329303|13329303|13329303|13329069 AAGACTGA 8mer-A1 dme-miR-14-3p X + 13328911 13328956 3'utr IP3K2 FlyBase G46128.1 TAACCCCTTAAGTTTAAAATCAAAGACTGAAATCACAATATGCATA 133 13328924 0.627803698 6 120 671 0.889473684 1.5289167 0 0.323308271 0.526315789 133 17 4 169 X:13328911-13328956 8 151.5 5273 FBgn0266375 946.9066667 46.57333333 71.42666667 0.159994649 3.25293444 2.121056562 9 9 9 0.01 dme-miR-305-3p 6mer3-8 ATGTGC X 13329026 13329031 + X_13329026_13329031_+ 1 1 1 0 IP3K2 FBtr0344168|FBtr0344171|FBtr0344170|FBtr0346133|FBtr0346134|FBtr0344169 13328764|13328764|13328764|13328764|13328764|13328764 13329069|13329303|13329303|13329303|13329303|13329303 X + 13328997 13329059 3'utr IP3K2 FlyBase G61092.1 ATATATAGAAGATATATAGCCTGGCCTATATGTGCTGCTGCTGCTGCTGTAGTGTAATTTATT 37 13329013 0.975335173 8 36 229 0.976190476 1.612783857 0.142857143 0.108108108 0.214285714 37 1 0 41 X:13328997-13329059 6 IP3K2 FBtr0344169|FBtr0346134|FBtr0346133|FBtr0344170|FBtr0344171|FBtr0344168 13328764|13328764|13328764|13328764|13328764|13328764 13329303|13329303|13329303|13329303|13329303|13329069 ATGTGC 6mer3-8 dme-miR-305-3p X + 13328995 13329042 3'utr IP3K2 FlyBase G46129.1 ACATATATAGAAGATATATAGCCTGGCCTATATGTGCTGCTGCTGCTG 27 13329013 0.77967311 4 27 157 1 1.681241237 0.291666667 0.444444444 0.6875 27 0 0 48 X:13328995-13329042 6 9.5 5274 FBgn0266375 946.9066667 46.57333333 71.42666667 0.010032668 0.203979387 0.133003547 13 13 13 0.01 dme-miR-1007-3p 7mer-A1 GAGCTTA X 13329213 13329219 + X_13329213_13329219_+ 0.823349562 0.823349562 0.823349562 0 IP3K2 FBtr0344171|FBtr0344170|FBtr0346133|FBtr0346134|FBtr0344169 13328764|13328764|13328764|13328764|13328764 13329303|13329303|13329303|13329303|13329303 X + 13329204 13329229 3'utr IP3K2 FlyBase G61094.1 ACGCAACAAGAGCTTAGACTAAGTTT 5 13329218 0.935195135 2 5 21 1 0.84509804 0 0.4 0.571428571 5 0 0 7 X:13329204-13329229 7 IP3K2 FBtr0344169|FBtr0346134|FBtr0346133|FBtr0344170|FBtr0344171 13328764|13328764|13328764|13328764|13328764 13329303|13329303|13329303|13329303|13329303 GAGCTTA 7mer-A1 dme-miR-1007-3p X + 13329088 13329241 3'utr IP3K2 FlyBase G46130.1 ATTCACGTTTGGCGAATCCTAGAGATACCCGAATGGCTGGAGATAATACCCACAAGGCAGTTGCAACTGTCGATCGTAACGATACGAAAAGTAACTAAGAAATGAACACACCCAACACGCAACAAGAGCTTAGACTAAGTTTTTAATATAATGG 16 13329218 0.999258056 9 16 75 1 1.397940009 0.16 0.5 0.68 16 0 0 25 X:13329088-13329241 7 4.5 5275 FBgn0266375 946.9066667 46.57333333 71.42666667 0.004752316 0.096621815 0.06300168 -5 -5 -5 0.01 dme-miR-970-3p 6mer2-7 CTTATG X 13340316 13340321 + X_13340316_13340321_+ 1 1 1 0 CG15747 FBtr0346618|FBtr0073766 13339603|13339603 13341009|13341009 X + 13340288 13340350 5'utr CG15747 FlyBase G61100.1 CCGAACAAATCCGCGTTGAGGCAGACAGCTTATGCAGAAATGACTTTTTAGGTTTAGGTTCAC 8 13340334 0.925877821 3 8 66 1 1 0.2 0.25 0.4 8 0 0 10 X:13340288-13340350 6 CG15747 FBtr0073766|FBtr0346618 13339603|13339603 13341009|13341009 CTTATG 6mer2-7 dme-miR-970-3p X + 13340290 13340347 5'utr CG15747 FlyBase G46137.1 GAACAAATCCGCGTTGAGGCAGACAGCTTATGCAGAAATGACTTTTTAGGTTTAGGTT 8 13340334 0.978989671 5 7 55 1 1.255272505 0 0.625 0.833333333 8 0 0 18 X:13340290-13340347 6 6 5276 FBgn0030474 636.7933333 30.34333333 46.72333333 0.009422209 0.19773701 0.128415495 -18 -18 -18 0.01 dme-miR-317-3p 6mer3-8 TGTGTT X 13379613 13379618 + X_13379613_13379618_+ 0.62685816 0.9998804 0.81336928 0.263766527 CG1640 FBtr0073774|FBtr0073772|FBtr0073771|FBtr0073770|FBtr0073769|FBtr0339837|FBtr0073773 13379580|13379580|13379580|13379580|13379580|13379580|13379580 13380160|13380160|13380160|13380160|13380160|13380160|13380160 X + 13379576 13379650 stop_codon CG1640 FlyBase G61111.1 AAGTAGATCAGCTGCCAACTTCCCCGTCCTCGATCCCTGTGTTAAGTGTCAATCCTCCGGCTTAGGATTAAAAAT 45 13379608 0.759661754 15 40 308 0.907407407 1.389166084 0.12962963 0.2 0.333333333 45 4 1 49 X:13379576-13379650 6 CG1640 FBtr0339837|FBtr0073773|FBtr0073769|FBtr0073771|FBtr0073770|FBtr0073774|FBtr0073772 13379580|13379580|13379580|13379580|13379580|13379580|13379580 13380160|13380160|13380160|13380160|13380160|13380160|13380160 TGTGTT 6mer3-8 dme-miR-317-3p X + 13379569 13379653 stop_codon CG1640 FlyBase G46143.1 GAAGTACAAGTAGATCAGCTGCCAACTTCCCCGTCCTCGATCCCTGTGTTAAGTGTCAATCCTCCGGCTTAGGATTAAAAATTTA 30 13379609 0.765841305 11 27 225 0.904761905 1.579783597 0.261904762 0.366666667 0.547619048 30 4 0 38 X:13379569-13379653 6 22.5 5277 FBgn0030478 719.3333333 33.57333333 51.13 0.031278962 0.670174742 0.440054762 5 4 4.5 0.01 dme-miR-14-3p 6mer3-8 AAGACT X 13380574 13380579 - X_13380574_13380579_- 1 1 1 0 Rbp1-like FBtr0339838 13380164 13380955 X - 13380555 13380596 3'utr Rbp1-like FlyBase G67198.1 ATTGGTTTTTAGGCCTTAAGACTTTGGTAGATTTTAATTCAG 23 13380572 0.768928257 6 23 241 1 1.431363764 0.074074074 0.130434783 0.259259259 23 0 0 27 X:13380555-13380596 6 Rbp1-like FBtr0339838 13380164 13380955 AAGACT 6mer3-8 dme-miR-14-3p X - 13380556 13380595 3'utr Rbp1-like FlyBase G50590.1 TTGGTTTTTAGGCCTTAAGACTTTGGTAGATTTTAATTCA 19 13380572 0.720135623 5 19 173 1 1.414973348 0.115384615 0.315789474 0.5 19 0 0 26 X:13380556-13380595 6 21 5278 FBgn0030479 464.9333333 40.22333333 61.53666667 0.045167766 0.522085025 0.341259953 -7 -7 -7 0.01 dme-miR-190-5p 6mer3-8 ACATAT X 13380870 13380875 - X_13380870_13380875_- 1 1 1 0 Rbp1-like FBtr0073790|FBtr0339838 13380703|13380164 13380955|13380955 X - 13380825 13380880 3'utr Rbp1-like FlyBase G67200.1 ATTATACATATACAGAGATATATACATAAAGTAGTACGGCCCCAGAGTTGAGGACA 7 13380860 0.973937037 3 7 42 1 1 0.1 0.285714286 0.5 7 0 0 10 X:13380825-13380880 6 Rbp1-like FBtr0339838|FBtr0073790 13380164|13380703 13380955|13380955 ACATAT 6mer3-8 dme-miR-190-5p X - 13380825 13380875 3'utr Rbp1-like FlyBase G50591.1 ACATATACAGAGATATATACATAAAGTAGTACGGCCCCAGAGTTGAGGACA 7 13380861 0.969925071 3 7 38 1 1.041392685 0 0.285714286 0.545454545 7 0 0 11 X:13380825-13380875 6 3.5 5279 FBgn0030479 464.9333333 40.22333333 61.53666667 0.007527961 0.087014171 0.056876659 -15 -14 -14.5 0.01 dme-miR-282-5p 6mer2-7 GAGGCT X 13386050 13386055 - X_13386050_13386055_- 1 1 1 0 Yippee FBtr0073789|FBtr0100168 13385912|13385912 13386343|13386533 X - 13385940 13386168 3'utr Yippee FlyBase G67203.1 CCGCCACGGAGCACATGCGACTACGGCCCTGTCTTAACGTGACTTAAACGTAATTGTAGGCACATCTAGCACGTAAGCAGCTGCGGCGCCCAATTCTACCATTTAAATGTCATGAGGCTGAAGTGCTAAAACGAAAAAGATGGGCTGCTACTCAGCTGGAACATATTCGAAACTGATGATCCACACTTGTCTTTTTCAAACAAGATCTCTAGGCCGTAATCAATCAGCA 537 13386056 0.998371706 28 524 2786 0.986686391 2.347004579 0.022189349 0.2141527 0.375739645 537 7 2 667 X:13385940-13386168 6 Yippee FBtr0073789|FBtr0100168 13385912|13385912 13386343|13386533 GAGGCT 6mer2-7 dme-miR-282-5p X - 13385990 13386086 3'utr Yippee FlyBase G50594.1 GCGGCGCCCAATTCTACCATTTAAATGTCATGAGGCTGAAGTGCTAAAACGAAAAAGATGGGCTGCTACTCAGCTGGAACATATTCGAAACTGATGA 328 13386056 0.956721014 11 323 1521 0.992110454 2.701567985 0.007889546 0.402439024 0.613412229 328 4 0 503 X:13385990-13386086 6 363.5 5280 FBgn0026749 336.1966667 36.58666667 56.19666667 1.081212386 9.935313411 6.468355181 1 1 1 0.01 dme-miR-184-3p 6mer3-8 TCCGTC X 13386369 13386374 - X_13386369_13386374_- 1 1 1 0 Yippee FBtr0100168 13385912 13386533 X - 13386332 13386390 stop_codon Yippee FlyBase G67205.1 CAGAGGCAGAGGGCTTTCCGTCGGAGGCCGCCACCACGAGTCATTGAGCCGATTGAATA 9 13386375 0.907862781 3 9 30 1 1 0.3 0.111111111 0.2 9 0 0 10 X:13386332-13386390 6 Yippee FBtr0100168 13385912 13386533 TCCGTC 6mer3-8 dme-miR-184-3p X - 13386335 13386388 stop_codon Yippee FlyBase G50597.1 GAGGCAGAGGGCTTTCCGTCGGAGGCCGCCACCACGAGTCATTGAGCCGATTGA 7 13386375 0.914543212 3 7 24 1 1 0.3 0.428571429 0.6 7 0 0 10 X:13386335-13386388 6 6.5 5281 FBgn0026749 336.1966667 36.58666667 56.19666667 0.019333922 0.17766035 0.115665223 1 1 1 0.01 dme-miR-304-5p 7mer-m8 TGAGATT X 13389068 13389074 + X_13389068_13389074_+ 0.620203441 0.620203442 0.620203442 0 CG1662 FBtr0342624 13388748 13389332 X + 13389034 13389084 3'utr CG1662 FlyBase G61116.1 CGGGCTAACAAACATGCGATGCGATGTGATGCGTTGAGATTGGAGGCGATG 7 13389068 0.959490653 4 7 35 1 0.954242509 0.444444444 0.142857143 0.333333333 7 0 0 9 X:13389034-13389084 7 CG1662 FBtr0342624 13388748 13389332 TGAGATT 7mer-m8 dme-miR-304-5p X + 13389059 13389084 3'utr CG1662 FlyBase G46147.1 GTGATGCGTTGAGATTGGAGGCGATG 5 13389067 0.708644764 3 4 24 0.833333333 0.698970004 0.5 0.2 0.333333333 5 1 0 5 X:13389059-13389084 7 5 5282 FBgn0030481 293.9633333 22.57333333 34.69666667 0.017008924 0.221500295 0.144106062 0 1 0.5 0.01 dme-miR-980-3p 6mer3-8 GGCAGC X 13389129 13389134 + X_13389129_13389134_+ 0.999999987 1 0.999999993 0 CG1662 FBtr0342624 13388748 13389332 X + 13389106 13389142 3'utr CG1662 FlyBase G61117.1 TTTTCACCTGATAAGCTCTGCTTGGCAGCGGTCTTAA 10 13389127 0.649378848 4 9 66 0.923076923 0.77815125 0.307692308 0.3 0.461538462 10 0 1 12 X:13389106-13389142 6 CG1662 FBtr0342624 13388748 13389332 GGCAGC 6mer3-8 dme-miR-980-3p X + 13389109 13389139 3'utr CG1662 FlyBase G46148.1 TCACCTGATAAGCTCTGCTTGGCAGCGGTCT 8 13389127 0.71628303 3 6 42 0.727272727 0.602059991 0.181818182 0.375 0.545454545 8 2 1 8 X:13389109-13389139 6 9 5283 FBgn0030481 293.9633333 22.57333333 34.69666667 0.030616063 0.398700532 0.259390912 2 2 2 0.01 dme-miR-7-5p 6mer2-7 TCTTCC X 13409149 13409154 + X_13409149_13409154_+ 1 1 1 0 GstT4 FBtr0073778 13409034 13409323 X + 13409133 13409235 3'utr GstT4 FlyBase G61143.1 TTGTGATTATACTTGCTCTTCCTATCCAATAAGTCTTAGCCTTTCCATCACACTTGTTTTAACAATACCATTTGTGTCACGTAATGCTCATCTGTTTAAACGT 66 13409146 0.810226373 14 57 563 0.890243902 1.08517161 0.317073171 0.212121212 0.365853659 66 4 5 73 X:13409133-13409235 6 GstT4 FBtr0073778 13409034 13409323 TCTTCC 6mer2-7 dme-miR-7-5p X + 13409135 13409186 3'utr GstT4 FlyBase G46175.1 GTGATTATACTTGCTCTTCCTATCCAATAAGTCTTAGCCTTTCCATCACACT 27 13409146 0.708215918 9 25 238 0.9 1.255272505 0.05 0.37037037 0.575 27 3 1 36 X:13409135-13409186 6 26.5 5284 FBgn0030484 325.7333333 32.05333333 48.2 0.081354892 0.826747088 0.549792531 3 3 3 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT X 1344056 1344062 + X_1344056_1344062_+ 0.658999527 0.658999527 0.658999527 0 CG11412 FBtr0310619|FBtr0070209 1343942|1343942 1344770|1344770 X + 1344005 1344106 3'utr CG11412 FlyBase G57908.1 GCGCTCTGCGGAGGACCAGGGCGCTCCCCTCGTCCTGGGTCCTGGCCAGCTGGCAGCTTGTATCGGCGCCCTCTTTTTTGTACCTATTTAACTAGGAAGCAT 21 1344055 0.983582594 7 21 161 1 1.380211242 0.083333333 0.142857143 0.25 21 0 0 24 X:1344005-1344106 7 CG11412 FBtr0070209|FBtr0310619 1343942|1343942 1344770|1344770 GGCAGCT 7mer-m8 dme-miR-980-3p X + 1344033 1344101 3'utr CG11412 FlyBase G43808.2 CTCGTCCTGGGTCCTGGCCAGCTGGCAGCTTGTATCGGCGCCCTCTTTTTTGTACCTATTTAACTAGGA 8 1344055 0.983836558 2 7 64 0.9 0.954242509 0 0.25 0.4 8 1 0 9 X:1344033-1344101 7 8.5 5285 FBgn0024362 306.67 16.69 25.75666667 0.02771709 0.509286998 0.330011647 1 1 1 0.01 dme-miR-184-3p 6mer2-7 CCGTCC X 1344140 1344145 + X_1344140_1344145_+ 1 1 1 0 CG11412 FBtr0310619|FBtr0070209 1343942|1343942 1344770|1344770 X + 1344110 1344156 3'utr CG11412 FlyBase G57909.1 AGCATCAGTTTATTTTCTCCCCAACTCACACCGTCCCTTGTCTCTCT 29 1344147 0.932375313 5 25 188 0.846153846 1.217483944 0.282051282 0.275862069 0.461538462 29 5 1 33 X:1344110-1344156 6 CG11412 FBtr0070209|FBtr0310619 1343942|1343942 1344770|1344770 CCGTCC 6mer2-7 dme-miR-184-3p X + 1344120 1344157 3'utr CG11412 FlyBase G43809.1 TATTTTCTCCCCAACTCACACCGTCCCTTGTCTCTCTT 25 1344147 0.745654689 5 22 182 0.921052632 0.942008053 0.263157895 0.48 0.657894737 25 0 3 35 X:1344120-1344157 6 25.5 5286 FBgn0024362 306.67 16.69 25.75666667 0.08315127 1.527860995 0.990034942 -7 -7 -7 0.01 dme-miR-92b-3p 7mer-A1 TGCAATA X 1344285 1344291 + X_1344285_1344291_+ 0.782911824 0.782911824 0.782911824 0 CG11412 FBtr0310619|FBtr0070209 1343942|1343942 1344770|1344770 X + 1344243 1344308 3'utr CG11412 FlyBase G57910.1 CGGACCCGAAATTTGGTTAATTTTACAGGAGGCAATTTTGTATGCAATACGTGATTTACATGCATA 10 1344298 0.98096312 4 10 69 1 1.204119983 0.125 0.5 0.6875 10 0 0 16 X:1344243-1344308 7 CG11412 FBtr0070209|FBtr0310619 1343942|1343942 1344770|1344770 TGCAATA 7mer-A1 dme-miR-92b-3p X + 1344256 1344309 3'utr CG11412 FlyBase G43810.1 TGGTTAATTTTACAGGAGGCAATTTTGTATGCAATACGTGATTTACATGCATAA 6 1344279 0.973935261 3 5 41 1 0.954242509 0.222222222 0.333333333 0.555555556 6 0 0 9 X:1344256-1344309 7 5.5 5287 FBgn0024362 306.67 16.69 25.75666667 0.017934588 0.329538646 0.213536948 -13 6 -3.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 1350142 1350148 - X_1350142_1350148_- 0.750710541 0.754178748 0.752444644 0.002452388 CG12773 FBtr0070235|FBtr0070235|FBtr0070235|FBtr0342738|FBtr0342738|FBtr0342738|FBtr0332287|FBtr0332287|FBtr0332287 1349885|1349885|1349885|1349621|1349621|1349621|1349885|1349885|1349885 1350877|1350877|1350877|1350877|1350877|1350877|1350877|1350877|1350877 X - 1350127 1350162 3'utr CG12773 FlyBase G63979.1 TTCGAGGAGACATATGTGATACTGAGATAATAAGTG 19 1350140 0.777748911 3 17 97 0.962962963 1.414973348 0.518518519 0.263157895 0.481481481 19 1 0 26 X:1350127-1350162 7 CG12773 FBtr0332287|FBtr0332287|FBtr0332287|FBtr0342738|FBtr0342738|FBtr0342738|FBtr0070235|FBtr0070235|FBtr0070235 1349885|1349885|1349885|1349621|1349621|1349621|1349885|1349885|1349885 1350877|1350877|1350877|1350877|1350877|1350877|1350877|1350877|1350877 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 1350117 1350162 3'utr CG12773 FlyBase G48228.1 TTCGAGGAGACATATGTGATACTGAGATAATAAGTGAAACCAAAAC 17 1350140 0.925374563 3 17 93 1 1.361727836 0.47826087 0.352941176 0.52173913 17 0 0 23 X:1350117-1350162 7 18 5288 FBgn0024365 573.3566667 17.87333333 27.26333333 0.031394071 1.007086908 0.660227412 -8 -8 -8 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG X 1350806 1350811 - X_1350806_1350811_- 1 1 1 0 CG12773 FBtr0070235|FBtr0342738|FBtr0332287 1349885|1349621|1349885 1350877|1350877|1350877 X - 1350792 1350846 3'utr CG12773 FlyBase G63984.1 CTGTATGCGGGCCGGGCAACGGGGCAGGCGGCGTGGCTGTGGAAAGCAATAGTCG 70 1350813 0.958741793 3 61 146 0.934210526 1.374137094 0.302631579 0.057142857 0.131578947 70 3 2 71 X:1350792-1350846 6 CG12773 FBtr0332287|FBtr0342738|FBtr0070235 1349885|1349621|1349885 1350877|1350877|1350877 GCTGTG 6mer2-7 dme-miR-1008-3p X - 1350774 1350841 3'utr CG12773 FlyBase G48233.1 TGCGGGCCGGGCAACGGGGCAGGCGGCGTGGCTGTGGAAAGCAATAGTCGAGTGCATTTCTCTACCGC 75 1350813 0.962742969 3 73 159 0.991869919 2.086359831 0.333333333 0.466666667 0.674796748 75 1 0 122 X:1350774-1350841 6 68 5289 FBgn0024365 573.3566667 17.87333333 27.26333333 0.118599824 3.804550541 2.494192444 2 2 2 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA X 1356596 1356603 - X_1356596_1356603_- 0.500120318 0.500120318 0.500120318 0 png FBtr0070234 1356486 1356657 X - 1356536 1356629 3'utr png FlyBase G63997.1 GAGGAGACCTCAACAAATATTTCATTGTACTTAAGAACTAGGCTAGCTTAAGCGATAAATTAAGGTGTGTGCTGTGCTTTGTGTGCGCCTGTGC 20 1356604 0.989153272 7 19 183 0.956521739 1.342422681 0.043478261 0.1 0.217391304 20 1 0 22 X:1356536-1356629 8 png FBtr0070234 1356486 1356657 GTACTTAA 8mer-A1 dme-miR-252-5p X - 1356575 1356618 3'utr png FlyBase G48241.1 AACAAATATTTCATTGTACTTAAGAACTAGGCTAGCTTAAGCGA 7 1356604 0.703754787 4 7 54 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 X:1356575-1356618 8 11 5290 FBgn0000826 56.66666667 6.136666667 9.246666667 0.194117647 1.792504074 1.18961788 1 1 1 0.01 dme-miR-317-3p 7mer-A1 GTGTTCA X 13590874 13590880 + X_13590874_13590880_+ 0.823349562 0.823349562 0.823349562 0 Tango13 FBtr0310433|FBtr0333723|FBtr0310432 13590373|13589952|13589952 13593224|13591760|13591760 X + 13590846 13590891 3'utr Tango13 FlyBase G61163.1 TTACTATTACCTTGATTACCAGCTAATCGTGTTCAATTGATAAGCT 44 13590872 0.792006086 8 39 425 0.867924528 1.361727836 0.433962264 0.159090909 0.301886792 44 6 1 46 X:13590846-13590891 7 Tango13 FBtr0310432|FBtr0333723|FBtr0310433 13589952|13589952|13590373 13591760|13591760|13593224 GTGTTCA 7mer-A1 dme-miR-317-3p X + 13590829 13590892 3'utr Tango13 FlyBase G46192.1 TGAAATGGTCAGTACAATTACTATTACCTTGATTACCAGCTAATCGTGTTCAATTGATAAGCTA 45 13590872 0.776597679 11 33 431 0.777777778 1.799340549 0.580246914 0.488888889 0.716049383 45 18 0 63 X:13590829-13590892 7 40 5291 FBgn0086674 1960.31 48.50666667 74.51333333 0.020404936 0.824628917 0.536816677 2 2 2 0.01 dme-miR-12-5p 6mer2-7 ATACTC X 13591173 13591178 + X_13591173_13591178_+ 0.995265342 1 0.997632671 0.003347938 Tango13 FBtr0310433|FBtr0333723|FBtr0310432 13590373|13589952|13589952 13593224|13591760|13591760 X + 13591162 13591195 3'utr Tango13 FlyBase G61164.1 AAATCCATTGCATACTCTCACCGACCTCGTTTAC 5 13591192 0.660435835 3 5 31 1 0.698970004 0 0 0 5 0 0 5 X:13591162-13591195 6 Tango13 FBtr0310432|FBtr0333723|FBtr0310433 13589952|13589952|13590373 13591760|13591760|13593224 ATACTC 6mer2-7 dme-miR-12-5p X + 13591159 13591195 3'utr Tango13 FlyBase G46193.1 AGGAAATCCATTGCATACTCTCACCGACCTCGTTTAC 6 13591191 0.798442413 4 5 36 0.777777778 0.84509804 0.111111111 0.5 0.666666667 6 2 0 7 X:13591159-13591195 6 5 5292 FBgn0086674 1960.31 48.50666667 74.51333333 0.002550617 0.103078615 0.067102085 -19 -18 -18.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA X 13591393 13591399 + X_13591393_13591399_+ 0.823297856 0.822917481 0.823107668 0.000268983 Tango13 FBtr0310433|FBtr0333723|FBtr0310432 13590373|13589952|13589952 13593224|13591760|13591760 X + 13591311 13591432 3'utr Tango13 FlyBase G61165.1 CCCCCCCTTTTTTTTGTATCTGTAATTGTGTACATAAAATATAAATATCTGAATTATGTTTCCCACTAATCGAATGAATCTCTACCTGAAATTCGTCTATGGGCTCGCGGAATCTTTATAGG 28 13591410 0.984451581 10 25 207 0.914285714 1.505149978 0.371428571 0.178571429 0.342857143 28 3 0 32 X:13591311-13591432 7 Tango13 FBtr0310432|FBtr0333723|FBtr0310433 13589952|13589952|13590373 13591760|13591760|13593224 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" X + 13591342 13591433 3'utr Tango13 FlyBase G46194.1 ACATAAAATATAAATATCTGAATTATGTTTCCCACTAATCGAATGAATCTCTACCTGAAATTCGTCTATGGGCTCGCGGAATCTTTATAGGT 21 13591410 0.980789256 5 21 153 1 1.447158031 0.357142857 0.285714286 0.464285714 21 0 0 28 X:13591342-13591433 7 14 5293 FBgn0086674 1960.31 48.50666667 74.51333333 0.007141728 0.288620121 0.187885837 -17 -17 -17 0.01 dme-miR-1012-3p 6mer3-8 TTGACT X 13591665 13591670 + X_13591665_13591670_+ 1 1 1 0 Tango13 FBtr0310433|FBtr0333723|FBtr0310432 13590373|13589952|13589952 13593224|13591760|13591760 X + 13591639 13591677 3'utr Tango13 FlyBase G61167.1 AACTTTTTTTTTTGTGTTGCAATAAATTGACTGAATGTA 22 13591665 0.866909578 6 21 185 0.92 1.361727836 0.4 0.136363636 0.24 22 2 0 23 X:13591639-13591677 6 Tango13 FBtr0310432|FBtr0333723|FBtr0310433 13589952|13589952|13590373 13591760|13591760|13593224 TTGACT 6mer3-8 dme-miR-1012-3p X + 13591646 13591686 3'utr Tango13 FlyBase G46196.1 TTTTTTGTGTTGCAATAAATTGACTGAATGTAAAGAAAACC 21 13591664 0.723449522 6 21 152 1 1.477121255 0.333333333 0.428571429 0.6 21 0 0 30 X:13591646-13591686 6 21.5 5294 FBgn0086674 1960.31 48.50666667 74.51333333 0.010967653 0.443238043 0.288538964 0 1 0.5 0.01 dme-miR-252-5p 7mer-m8 GTACTTA X 13592253 13592259 + X_13592253_13592259_+ 0.588299917 0.588299917 0.588299917 0 Tango13 FBtr0310433 13590373 13593224 X + 13592190 13592285 3'utr Tango13 FlyBase G61168.1 AGACACACGAGCCTTGTCCGTCCTAACTGCTGTGTGTGTGGGCGAACGGGATGGCTATATTATGTACTTACTTGCCGTTAGCTTTGTGCTCAAAGA 51 13592252 0.95608359 8 48 466 0.963636364 1.72427587 0.4 0.078431373 0.145454545 51 2 0 53 X:13592190-13592285 7 Tango13 FBtr0310433 13590373 13593224 GTACTTA 7mer-m8 dme-miR-252-5p X + 13592227 13592272 3'utr Tango13 FlyBase G46197.1 GTGGGCGAACGGGATGGCTATATTATGTACTTACTTGCCGTTAGCT 19 13592252 0.987410824 3 18 186 0.966666667 1.462397998 0.5 0.368421053 0.6 19 1 0 29 X:13592227-13592272 7 28.5 5295 FBgn0086674 1960.31 48.50666667 74.51333333 0.014538517 0.587548103 0.382481882 1 1 1 0.01 dme-miR-1012-3p 6mer3-8 TTGACT X 13609071 13609076 + X_13609071_13609076_+ 1 1 1 0 CG11178 FBtr0073805|FBtr0345128 13608910|13608910 13609529|13609529 X + 13609060 13609114 3'utr CG11178 FlyBase G61175.1 TCTGTAGTTGGTTGACTTGTGGTACACAGAAACCTAGGATTTATGATCGAGCGAC 15 13609079 0.97976573 5 14 97 1 1.230448921 0.117647059 0.066666667 0.176470588 15 0 0 17 X:13609060-13609114 6 CG11178 FBtr0345128|FBtr0073805 13608910|13608910 13609529|13609529 TTGACT 6mer3-8 dme-miR-1012-3p X + 13608977 13609098 3'utr CG11178 FlyBase G46202.1 ACAACATATTGTCTCAGTCTCAATGTTGAATTTATAACTACTACTCGAACTTCCCCCCTATTTTTTTGTATACCCATACATATTCTGTAGTTGGTTGACTTGTGGTACACAGAAACCTAGGA 15 13609079 0.93354582 9 15 123 1 1.361727836 0.260869565 0.4 0.608695652 15 0 0 23 X:13608977-13609098 6 8.5 5296 FBgn0030499 466.3333333 18.44 28.13 0.018227305 0.460954447 0.302168503 -8 -8 -8 0.01 dme-miR-31a-5p 6mer2-7 CTTGCC X 13609379 13609384 + X_13609379_13609384_+ 1 1 1 0 CG11178 FBtr0073805|FBtr0345128 13608910|13608910 13609529|13609529 X + 13609351 13609422 3'utr CG11178 FlyBase G61176.1 ATTTATAGATACCTACGCTTAAGTTACCCTTGCCGTATTTACCCACCACTCAGTGTATACATATGTATAACC 21 13609380 0.983350508 6 19 148 0.958333333 1.06069784 0.041666667 0.095238095 0.208333333 21 0 1 23 X:13609351-13609422 6 CG11178 FBtr0345128|FBtr0073805 13608910|13608910 13609529|13609529 CTTGCC 6mer2-7 dme-miR-31a-5p X + 13609357 13609447 3'utr CG11178 FlyBase G46203.1 AGATACCTACGCTTAAGTTACCCTTGCCGTATTTACCCACCACTCAGTGTATACATATGTATAACCATGTAAAGCTAAACCGTTCCAAGTG 11 13609381 0.978469815 5 11 80 1 1.230448921 0.058823529 0.454545455 0.647058824 11 0 0 17 X:13609357-13609447 6 11.5 5297 FBgn0030499 466.3333333 18.44 28.13 0.024660472 0.623644252 0.40881621 -1 -2 -1.5 0.01 dme-miR-14-3p 6mer3-8 AAGACT X 13660541 13660546 + X_13660541_13660546_+ 1 1 1 0 NFAT FBtr0301451 13658114 13661942 X + 13660491 13660578 3'utr NFAT FlyBase G61197.1 AGTGAAAGGCACTCGGATTTTACGGACCTCTCCCTTAGCAATCCCCTTCCAAGACTTATTCTCAGAAACCTGACCTAGGATTAAGAGG 14 13660549 0.98117135 8 13 99 0.933333333 1.146128036 0.4 0.071428571 0.133333333 14 1 0 14 X:13660491-13660578 6 NFAT FBtr0301451 13658114 13661942 AAGACT 6mer3-8 dme-miR-14-3p X + 13660513 13660564 3'utr NFAT FlyBase G46216.1 CGGACCTCTCCCTTAGCAATCCCCTTCCAAGACTTATTCTCAGAAACCTGAC 10 13660549 0.977973821 5 10 70 1 1.113943352 0.076923077 0.2 0.384615385 10 0 0 13 X:13660513-13660564 6 9.5 5298 FBgn0030505 2159.646667 45.51666667 69.65666667 0.004398868 0.208714756 0.136383213 -8 -8 -8 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA X 13663102 13663107 + X_13663102_13663107_+ 1 1 1 0 NFAT FBtr0073808|FBtr0301450|FBtr0345127|FBtr0301449|FBtr0340396|FBtr0112980 13662758|13662758|13662758|13662758|13658114|13662758 13663657|13663657|13663657|13664568|13663657|13663657 X + 13663092 13663172 5'utr NFAT FlyBase G61209.1 AAAAAACAAATGATGAACTTATCTCAAAAGGTTAAATTAAAACAATGATAACGACTGCCATATACCTATGAAATATGAAGT 65 13663109 0.747232815 10 58 328 0.890243902 1.86332286 0.085365854 0.169230769 0.341463415 65 9 0 73 X:13663092-13663172 6 NFAT FBtr0301449|FBtr0340396|FBtr0112980|FBtr0073808|FBtr0301450|FBtr0345127 13662758|13658114|13662758|13662758|13662758|13662758 13664568|13663657|13663657|13663657|13663657|13663657 TGATGA 6mer3-8 dme-miR-2a-2-5p X + 13663099 13663185 5'utr NFAT FlyBase G46224.1 AAATGATGAACTTATCTCAAAAGGTTAAATTAAAACAATGATAACGACTGCCATATACCTATGAAATATGAAGTGAAATCCCGAAAG 46 13663109 0.969119468 9 43 235 0.9375 1.477121255 0.09375 0.391304348 0.5625 46 3 1 60 X:13663099-13663185 6 19 5299 FBgn0030505 2159.646667 45.51666667 69.65666667 0.008797735 0.417429513 0.272766426 -7 -7 -7 0.01 dme-miR-34-5p 7mer-A1 ACTGCCA X 13663145 13663151 + X_13663145_13663151_+ 0.823310059 0.823327461 0.82331876 1.23E-05 NFAT FBtr0073808|FBtr0301450|FBtr0345127|FBtr0301449|FBtr0340396|FBtr0112980 13662758|13662758|13662758|13662758|13658114|13662758 13663657|13663657|13663657|13664568|13663657|13663657 X + 13663092 13663172 5'utr NFAT FlyBase G61209.1 AAAAAACAAATGATGAACTTATCTCAAAAGGTTAAATTAAAACAATGATAACGACTGCCATATACCTATGAAATATGAAGT 65 13663138 0.747232815 10 58 328 0.890243902 1.86332286 0.085365854 0.169230769 0.341463415 65 9 0 73 X:13663092-13663172 7 NFAT FBtr0301449|FBtr0340396|FBtr0112980|FBtr0073808|FBtr0301450|FBtr0345127 13662758|13658114|13662758|13662758|13662758|13662758 13664568|13663657|13663657|13663657|13663657|13663657 ACTGCCA 7mer-A1 dme-miR-34-5p X + 13663099 13663185 5'utr NFAT FlyBase G46224.1 AAATGATGAACTTATCTCAAAAGGTTAAATTAAAACAATGATAACGACTGCCATATACCTATGAAATATGAAGTGAAATCCCGAAAG 46 13663139 0.969119468 9 43 235 0.9375 1.477121255 0.09375 0.391304348 0.5625 46 3 1 60 X:13663099-13663185 7 35.5 5300 FBgn0030505 2159.646667 45.51666667 69.65666667 0.016437874 0.77993409 0.509642532 7 6 6.5 0.01 dme-miR-14-3p 6mer3-8 AAGACT X 13663533 13663538 + X_13663533_13663538_+ 1 1 1 0 NFAT FBtr0073808|FBtr0301450|FBtr0345127|FBtr0301449|FBtr0340396|FBtr0112980 13662758|13662758|13662758|13662758|13658114|13662758 13663657|13663657|13663657|13664568|13663657|13663657 X + 13663495 13663561 5'utr NFAT FlyBase G61211.1 TGTAGCTACGAATATAATGAATATGCGAGAAATTCCAAAAGACTTTTGATTTAAAGAAAATGCAATT 146 13663540 0.644073639 9 143 939 0.983516484 2.252853031 0.115384615 0.178082192 0.340659341 146 3 0 179 X:13663495-13663561 6 NFAT FBtr0301449|FBtr0340396|FBtr0112980|FBtr0073808|FBtr0301450|FBtr0345127 13662758|13658114|13662758|13662758|13662758|13662758 13664568|13663657|13663657|13663657|13663657|13663657 AAGACT 6mer3-8 dme-miR-14-3p X + 13663502 13663553 5'utr NFAT FlyBase G46226.1 ACGAATATAATGAATATGCGAGAAATTCCAAAAGACTTTTGATTTAAAGAAA 96 13663540 0.625608967 8 94 619 0.985815603 2.1430148 0.113475177 0.364583333 0.567375887 96 2 0 139 X:13663502-13663553 6 112.5 5301 FBgn0030505 2159.646667 45.51666667 69.65666667 0.052091855 2.471622116 1.615064363 -7 -7 -7 0.01 dme-miR-932-5p 6mer2-7 GAATTG X 13664246 13664251 + X_13664246_13664251_+ 1 1 1 0 NFAT FBtr0301449 13662758 13664568 X + 13664217 13664266 3'utr NFAT FlyBase G61214.2 GAGAGAGAGAGCGAAGAGCTCGCGCTTAAGAATTGTTAGTGTTAAATGTT 66 13664252 0.982067367 6 63 547 0.96 1.857332496 0.493333333 0.106060606 0.213333333 66 3 0 72 X:13664217-13664266 6 NFAT FBtr0301449 13662758 13664568 GAATTG 6mer2-7 dme-miR-932-5p X + 13664216 13664265 3'utr NFAT FlyBase G46229.1 AGAGAGAGAGAGCGAAGAGCTCGCGCTTAAGAATTGTTAGTGTTAAATGT 31 13664252 0.983544032 4 30 233 0.977777778 1.643452676 0.511111111 0.419354839 0.6 31 1 0 44 X:13664216-13664265 6 46 5302 FBgn0030505 2159.646667 45.51666667 69.65666667 0.021299781 1.010618821 0.660381873 -6 -6 -6 0.01 dme-miR-1006-3p 6mer2-7 GAATTT X 13684451 13684456 - X_13684451_13684456_- 1 1 1 0 CG9940 FBtr0073844 13684378 13685808 X - 13684417 13684478 3'utr CG9940 FlyBase G67256.1 ATGTAGATTTATAGCACATTGTGAATTTGAACACTCGCATCAGATCGATTTAATGGAACACT 12 13684460 0.986281462 5 12 102 1 1.146128036 0.071428571 0.166666667 0.285714286 12 0 0 14 X:13684417-13684478 6 CG9940 FBtr0073844 13684378 13685808 GAATTT 6mer2-7 dme-miR-1006-3p X - 13684442 13684482 3'utr CG9940 FlyBase G50633.1 AAGCATGTAGATTTATAGCACATTGTGAATTTGAACACTCG 7 13684452 0.847391069 5 7 58 1 1.113943352 0 0.428571429 0.692307692 7 0 0 13 X:13684442-13684482 6 8.5 5303 FBgn0030512 1001.65 27.86666667 42.76666667 0.008485998 0.305023923 0.198752923 4 -4 0 0.01 dme-miR-307a-3p 7mer-m8 GGTTGTG X 13685072 13685078 - X_13685072_13685078_- 0.702972035 0.702972035 0.702972035 0 CG9940 FBtr0343352|FBtr0073844|FBtr0073845 13684551|13684378|13684551 13685808|13685808|13685808 X - 13685060 13685087 3'utr CG9940 FlyBase G67258.1 TGTGTTATTGGTTGTGTACGGTGCGGCT 6 13685073 0.656934328 3 5 56 1 0.954242509 0.444444444 0.333333333 0.555555556 6 0 0 9 X:13685060-13685087 7 CG9940 FBtr0073845|FBtr0343352|FBtr0073844 13684551|13684551|13684378 13685808|13685808|13685808 GGTTGTG 7mer-m8 dme-miR-307a-3p X - 13685059 13685088 3'utr CG9940 FlyBase G50634.1 TTGTGTTATTGGTTGTGTACGGTGCGGCTT 5 13685079 0.739103348 2 3 45 0.5 0.602059991 0.125 0.4 0.625 5 4 0 4 X:13685059-13685088 7 5 5304 FBgn0030512 1001.65 27.86666667 42.76666667 0.004991764 0.179425837 0.116913484 -5 1 -2 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC X 13714360 13714365 + X_13714360_13714365_+ 1 1 1 0 NnaD FBtr0340677|FBtr0340676|FBtr0340673|FBtr0340674|FBtr0340672|FBtr0340671|FBtr0340675 13713650|13713650|13713650|13713650|13713650|13713650|13713650 13714435|13714435|13714435|13714435|13714435|13714435|13714435 X + 13714303 13714377 3'utr NnaD FlyBase G61228.1 AGGTCTTTTATCTTATCCTAGTCGCTCTAACTATAATTCGCGTTTCTTTCGATGTTGCTAGTCGTAAGCGTAACC 21 13714358 0.798710579 6 19 191 0.933333333 1.146128036 0.166666667 0.333333333 0.533333333 21 1 1 28 X:13714303-13714377 6 NnaD FBtr0340672|FBtr0340671|FBtr0340675|FBtr0340677|FBtr0340676|FBtr0340673|FBtr0340674 13713650|13713650|13713650|13713650|13713650|13713650|13713650 13714435|13714435|13714435|13714435|13714435|13714435|13714435 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" X + 13714340 13714376 3'utr NnaD FlyBase G46243.1 TCGCGTTTCTTTCGATGTTGCTAGTCGTAAGCGTAAC 5 13714358 0.939141733 3 4 38 0.9 0.954242509 0.1 0.6 0.8 5 1 0 9 X:13714340-13714376 6 5 5305 FBgn0265726 100.7866667 2.52 3.85 0.049609737 1.984126984 1.298701299 2 2 2 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 13717793 13717798 + X_13717793_13717798_+ 1 1 1 0 NnaD FBtr0340678|FBtr0340680|FBtr0340679 13717605|13717605|13717605 13717835|13717835|13717835 X + 13717776 13717808 3'utr NnaD FlyBase G61229.1 ATGTAAACCCGATCTCTGTACCTACAGTTAATC 9 13717792 0.833073886 2 8 52 0.888888889 0.903089987 0 0 0 9 1 0 8 X:13717776-13717808 6 NnaD FBtr0340680|FBtr0340678|FBtr0340679 13717605|13717605|13717605 13717835|13717835|13717835 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X + 13717749 13717802 3'utr NnaD FlyBase G46244.1 TAACACCTATAGGCGTATTTTATGCATATGTAAACCCGATCTCTGTACCTACAG 9 13717792 0.967355905 4 9 53 1 1.146128036 0.285714286 0.333333333 0.571428571 9 0 0 14 X:13717749-13717802 6 8 5306 FBgn0265726 100.7866667 2.52 3.85 0.079375579 3.174603175 2.077922078 1 1 1 0.01 dme-miR-79-3p 7mer-m8 TAGCTTT X 13719126 13719132 - X_13719126_13719132_- 0.620204031 0.620204031 0.620204031 0 CG9941 FBtr0073843 13718732 13719175 X - 13719108 13719151 3'utr CG9941 FlyBase G67268.2 GAAATTCGTTTTCTCGTTTTAGCTTTGCGTTTATACTATTTATT 11 13719130 0.610710672 4 8 125 0.866666667 1.113943352 0.333333333 0.181818182 0.4 11 2 0 13 X:13719108-13719151 7 CG9941 FBtr0073843 13718732 13719175 TAGCTTT 7mer-m8 dme-miR-79-3p X - 13719086 13719145 3'utr CG9941 FlyBase G50639.1 CGTTTTCTCGTTTTAGCTTTGCGTTTATACTATTTATTCGGAGTTCACCTAGATTTAGTT 6 13719133 0.98966561 4 6 60 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 X:13719086-13719145 7 6.5 5307 FBgn0030514 1053.746667 41.08333333 63.20333333 0.006168466 0.15821501 0.102842677 -2 1 -0.5 0.01 dme-miR-252-5p 6mer3-8 GTACTT X 13736651 13736656 - X_13736651_13736656_- 1 1 1 0 Grip91 FBtr0073841 13736568 13737101 X - 13736648 13736701 3'utr Grip91 FlyBase G67296.1 TTGCCAATTGCCATGTTGTAATTAAAGAGAATAAGAGAATGTTACGTACTTTAA 12 13736660 0.670756566 5 12 65 1 1.176091259 0.066666667 0.083333333 0.266666667 12 0 0 15 X:13736648-13736701 6 Grip91 FBtr0073841 13736568 13737101 GTACTT 6mer3-8 dme-miR-252-5p X - 13736649 13736698 3'utr Grip91 FlyBase G50655.1 CCAATTGCCATGTTGTAATTAAAGAGAATAAGAGAATGTTACGTACTTTA 6 13736660 0.962655713 3 5 29 1 1 0 0.5 0.7 6 0 0 10 X:13736649-13736698 6 5 5308 FBgn0001612 613.5433333 20.81666667 31.92333333 0.008149384 0.240192154 0.156625248 4 4 4 0.01 dme-miR-79-3p 6mer2-7 AGCTTT X 13736887 13736892 - X_13736887_13736892_- 1 1 1 0 Grip91 FBtr0073841 13736568 13737101 X - 13736861 13736900 3'utr Grip91 FlyBase G67297.1 ATATCTCAAGCTTTGCCGTCAATCGCCTGGCTGCAAGCCA 13 13736887 0.677060716 5 13 74 1 1.230448921 0.117647059 0.230769231 0.411764706 13 0 0 17 X:13736861-13736900 6 Grip91 FBtr0073841 13736568 13737101 AGCTTT 6mer2-7 dme-miR-79-3p X - 13736822 13736892 3'utr Grip91 FlyBase G50656.1 AGCTTTGCCGTCAATCGCCTGGCTGCAAGCCATCAACTTAAGATATCTCCAATACAAAATTATTGAGTAGT 6 13736889 0.97645154 5 6 39 1 0.954242509 0 0.5 0.666666667 6 0 0 9 X:13736822-13736892 6 7.5 5309 FBgn0001612 613.5433333 20.81666667 31.92333333 0.012224075 0.360288231 0.234937872 -5 -3 -4 0.01 dme-miR-304-5p 6mer3-8 TGAGAT X 13736989 13736994 - X_13736989_13736994_- 1 1 1 0 Grip91 FBtr0073841 13736568 13737101 X - 13736951 13736994 3'utr Grip91 FlyBase G67298.1 TGAGATATCTCGATATCATTGGAGCCAATCCAACCAAACAAACT 13 13736976 0.976765833 4 12 78 0.928571429 0.812913357 0.642857143 0.076923077 0.142857143 13 0 1 13 X:13736951-13736994 6 Grip91 FBtr0073841 13736568 13737101 TGAGAT 6mer3-8 dme-miR-304-5p X - 13736960 13737009 3'utr Grip91 FlyBase G50657.1 TTGCTGCTAAATATTTGAGATATCTCGATATCATTGGAGCCAATCCAACC 6 13736985 0.979300428 3 5 42 1 0.954242509 0.555555556 0.5 0.666666667 6 0 0 9 X:13736960-13737009 6 8.5 5310 FBgn0001612 613.5433333 20.81666667 31.92333333 0.013853952 0.408326661 0.266262922 -18 -9 -13.5 0.01 dme-miR-980-3p 6mer3-8 GGCAGC X 1373777 1373782 + X_1373777_1373782_+ 1 1 1 0 ssx FBtr0339773|FBtr0339774|FBtr0339772|FBtr0070215 1373350|1373114|1371989|1373114 1374677|1375257|1374677|1374677 X + 1373766 1373795 3'utr ssx FlyBase G57923.1 ATCCAAGCATTGGCAGCAAGAGGCAAAGCA 6 1373776 0.635036294 2 6 7 1 0.903089987 0.25 0.166666667 0.375 6 0 0 8 X:1373766-1373795 6 ssx FBtr0339772|FBtr0070215|FBtr0339773|FBtr0339774 1371989|1373114|1373350|1373114 1374677|1374677|1374677|1375257 GGCAGC 6mer3-8 dme-miR-980-3p X + 1373763 1373801 3'utr ssx FlyBase G43819.1 CAAATCCAAGCATTGGCAGCAAGAGGCAAAGCAAAGGTG 16 1373776 0.704403669 2 15 24 0.96 1.380211242 0.08 0.4375 0.64 16 1 0 24 X:1373763-1373801 6 11 5311 FBgn0024987 898.8266667 36.91666667 56.86333333 0.012238177 0.297968397 0.193446275 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG X 1373900 1373905 + X_1373900_1373905_+ 1 1 1 0 ssx FBtr0339773|FBtr0339774|FBtr0339772|FBtr0070215 1373350|1373114|1371989|1373114 1374677|1375257|1374677|1374677 X + 1373878 1373909 3'utr ssx FlyBase G57924.1 TTAAGATGTACGAAATAATGTTCCAAAGTTAA 7 1373896 0.683887484 2 6 38 0.875 0.84509804 0.125 0.142857143 0.25 7 1 0 7 X:1373878-1373909 6 ssx FBtr0339772|FBtr0070215|FBtr0339773|FBtr0339774 1371989|1373114|1373350|1373114 1374677|1374677|1374677|1375257 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" X + 1373836 1373910 3'utr ssx FlyBase G43820.1 TCACAGAATTAAGCAGAGCAAATTAAAGATGCATAGCGTGTATTAAGATGTACGAAATAATGTTCCAAAGTTAAC 7 1373897 0.96243298 5 6 37 1 1.204119983 0.3125 0.857142857 0.9375 7 0 0 16 X:1373836-1373910 6 5.5 5312 FBgn0024987 898.8266667 36.91666667 56.86333333 0.006119089 0.148984199 0.096723137 4 3 3.5 0.01 dme-miR-965-3p 6mer2-7 ACGCTT X 1374281 1374286 + X_1374281_1374286_+ 1 1 1 0 ssx FBtr0339773|FBtr0339774|FBtr0339772|FBtr0070215 1373350|1373114|1371989|1373114 1374677|1375257|1374677|1374677 X + 1374246 1374328 3'utr ssx FlyBase G57926.1 TATAGAGAGACGAACCTTATGACAACAGACAGAAGACGCTTGCTCTGAATAGATGGTTAATTTGTAGACTTATAAGGAACGTC 47 1374286 0.97678676 10 46 299 0.981132075 1.716003344 0.245283019 0.085106383 0.188679245 47 1 0 52 X:1374246-1374328 6 ssx FBtr0339772|FBtr0070215|FBtr0339773|FBtr0339774 1371989|1373114|1373350|1373114 1374677|1374677|1374677|1375257 ACGCTT 6mer2-7 dme-miR-965-3p X + 1374264 1374329 3'utr ssx FlyBase G43822.1 ATGACAACAGACAGAAGACGCTTGCTCTGAATAGATGGTTAATTTGTAGACTTATAAGGAACGTCG 33 1374286 0.967248522 7 32 175 0.959183673 1.672097858 0.346938776 0.393939394 0.591836735 33 2 0 47 X:1374264-1374329 6 33.5 5313 FBgn0024987 898.8266667 36.91666667 56.86333333 0.037270812 0.90744921 0.589131837 -5 -5 -5 0.01 dme-miR-2535b-3p 8mer-A1 CCGTGAGA X 1374558 1374565 + X_1374558_1374565_+ 0.641821188 0.641821188 0.641821188 0 ssx FBtr0339773|FBtr0339774|FBtr0339772|FBtr0070215 1373350|1373114|1371989|1373114 1374677|1375257|1374677|1374677 X + 1374454 1374582 3'utr ssx FlyBase G57928.1 ATGAATGATGTATAAATACCCGAACTTCGGGTAAACTTCCAACAGAAACCCGACAAGAAGATGGCTGAATATGAAATAAACTTGAAATTTTCCAACCAGCATACCCGTGAGACCCAGAGGTCCGAAATT 36 1374555 0.964340804 9 36 119 1 1.643452676 0.25 0.166666667 0.318181818 36 0 0 44 X:1374454-1374582 8 ssx FBtr0339772|FBtr0070215|FBtr0339773|FBtr0339774 1371989|1373114|1373350|1373114 1374677|1374677|1374677|1375257 CCGTGAGA 8mer-A1 dme-miR-2535b-3p X + 1374537 1374579 3'utr ssx FlyBase G43824.1 GAAATTTTCCAACCAGCATACCCGTGAGACCCAGAGGTCCGAA 14 1374555 0.837149664 3 11 36 0.8 1.204119983 0.05 0.357142857 0.55 14 4 0 16 X:1374537-1374579 8 16 5314 FBgn0024987 898.8266667 36.91666667 56.86333333 0.017800985 0.433408578 0.2813764 3 3 3 0.01 dme-miR-14-3p 6mer3-8 AAGACT X 13745760 13745765 - X_13745760_13745765_- 1 1 1 0 Pdcd4 FBtr0331711|FBtr0331712|FBtr0112981 13745575|13745575|13745575 13746775|13746775|13746775 X - 13745741 13745789 3'utr Pdcd4 FlyBase G67308.1 AGCTGCATTTTATATGATAAGAAAAAGACTTTGTTTTCGCCGCACTTAT 115 13745758 0.636319753 12 113 739 0.993243243 1.866287339 0.047297297 0.234782609 0.405405405 115 0 1 147 X:13745741-13745789 6 Pdcd4 FBtr0112981|FBtr0331712|FBtr0331711 13745575|13745575|13745575 13746775|13746775|13746775 AAGACT 6mer3-8 dme-miR-14-3p X - 13745660 13745858 3'utr Pdcd4 FlyBase G50663.1 CTTTATACGTATATTTACCCACGGATTCATCTTATTCTGCTTGCTTTTTTTTTTTTTTGATTGAATAAAAGCTGCATTTTATATGATAAGAAAAAGACTTTGTTTTCGCCGCACTTATATTTTAAAATGTTCACACTTCATGAAGAAACAAAATTCGACATATTCTTAAAAATGCGCGCCCACACATCTATATATATTT 102 13745758 0.984229031 26 97 758 0.966216216 2.155336037 0.081081081 0.323529412 0.533783784 102 5 0 143 X:13745660-13745858 6 83 5315 FBgn0030520 6370.806667 230.15 350.2466667 0.013028177 0.360634369 0.236975846 -7 -7 -7 0.01 dme-miR-1012-3p 6mer3-8 TTGACT X 13745971 13745976 - X_13745971_13745976_- 1 1 1 0 Pdcd4 FBtr0331711|FBtr0331712|FBtr0112981 13745575|13745575|13745575 13746775|13746775|13746775 X - 13745958 13746027 3'utr Pdcd4 FlyBase G67310.1 TTATGCTATCAACGCAATCAAAACTCTGATGATTACACAAAACAAATTCCATTGACTTGAAATTGAGAAA 19 13745976 0.973292224 8 18 110 0.956521739 1.342422681 0.043478261 0.210526316 0.347826087 19 1 0 22 X:13745958-13746027 6 Pdcd4 FBtr0112981|FBtr0331712|FBtr0331711 13745575|13745575|13745575 13746775|13746775|13746775 TTGACT 6mer3-8 dme-miR-1012-3p X - 13745963 13746013 3'utr Pdcd4 FlyBase G50665.1 CAATCAAAACTCTGATGATTACACAAAACAAATTCCATTGACTTGAAATTG 12 13745979 0.756968307 7 12 67 1 1.278753601 0 0.25 0.526315789 12 0 0 19 X:13745963-13746013 6 10 5316 FBgn0030520 6370.806667 230.15 350.2466667 0.00156966 0.043449924 0.028551307 0 3 1.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC X 1374620 1374625 + X_1374620_1374625_+ 1 1 1 0 ssx FBtr0339773|FBtr0339774|FBtr0339772|FBtr0070215 1373350|1373114|1371989|1373114 1374677|1375257|1374677|1374677 X + 1374606 1374660 3'utr ssx FlyBase G57929.1 TCTAAACGTAAATCCTAGTCTCGTAGCAATATCATAGTTAAGGTGACTTTTTTTT 15 1374618 0.722758516 5 14 108 0.952380952 1.301029996 0.238095238 0.2 0.428571429 15 1 0 20 X:1374606-1374660 6 ssx FBtr0339772|FBtr0070215|FBtr0339773|FBtr0339774 1371989|1373114|1373350|1373114 1374677|1374677|1374677|1375257 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" X + 1374584 1374649 3'utr ssx FlyBase G43825.1 TTTTTTTTTAGTATTGATAATCTCTAAACGTAAATCCTAGTCTCGTAGCAATATCATAGTTAAGGT 11 1374626 0.985095887 4 9 80 0.833333333 1.176091259 0.166666667 0.545454545 0.722222222 11 3 0 15 X:1374584-1374649 6 10 5317 FBgn0024987 898.8266667 36.91666667 56.86333333 0.011125616 0.270880361 0.17586025 2 -6 -2 0.01 dme-bantam-3p 7mer-m8 TGATCTC X 13746439 13746445 - X_13746439_13746445_- 0.661615243 0.661615243 0.661615243 0 Pdcd4 FBtr0331711|FBtr0331712|FBtr0112981 13745575|13745575|13745575 13746775|13746775|13746775 X - 13746421 13746471 3'utr Pdcd4 FlyBase G67313.2 AAAAAAACAAACAATCAATCGGAATTTGATCTCCGTTTAAACTATATTCAT 243 13746446 0.79898818 11 230 2021 0.962068966 1.968482949 0.065517241 0.164609053 0.3 243 9 2 279 X:13746421-13746471 7 Pdcd4 FBtr0112981|FBtr0331712|FBtr0331711 13745575|13745575|13745575 13746775|13746775|13746775 TGATCTC 7mer-m8 dme-bantam-3p X - 13746389 13746469 3'utr Pdcd4 FlyBase G50669.1 AAAAACAAACAATCAATCGGAATTTGATCTCCGTTTAAACTATATTCATTATTATACTACATAAACACCTACAACGTATAT 169 13746446 0.985687804 11 166 1380 0.966942149 2.369215857 0.074380165 0.349112426 0.545454545 169 8 0 234 X:13746389-13746469 7 201.5 5318 FBgn0030520 6370.806667 230.15 350.2466667 0.031628648 0.875515968 0.57530883 1 1 1 0.01 dme-miR-184-5p 6mer3-8 TGATAA X 13746543 13746548 - X_13746543_13746548_- 1 1 1 0 Pdcd4 FBtr0331711|FBtr0331712|FBtr0112981 13745575|13745575|13745575 13746775|13746775|13746775 X - 13746502 13746563 3'utr Pdcd4 FlyBase G67314.1 AATTTGTCGCAAACTTGATAAAAAGAACTTATCCTCAGAATCCAGATAAGGACACAAACGAA 26 13746549 0.96228468 6 23 118 0.90625 1.161368002 0.15625 0.192307692 0.34375 26 2 1 29 X:13746502-13746563 6 Pdcd4 FBtr0112981|FBtr0331712|FBtr0331711 13745575|13745575|13745575 13746775|13746775|13746775 TGATAA 6mer3-8 dme-miR-184-5p X - 13746508 13746561 3'utr Pdcd4 FlyBase G50670.1 TTTGTCGCAAACTTGATAAAAAGAACTTATCCTCAGAATCCAGATAAGGACACA 19 13746549 0.758555152 7 19 108 1 1.431363764 0.185185185 0.368421053 0.555555556 19 0 0 27 X:13746508-13746561 6 15.5 5319 FBgn0030520 6370.806667 230.15 350.2466667 0.002432973 0.067347382 0.044254525 1 1 1 0.01 dme-miR-317-3p 6mer3-8 TGTGTT X 13774084 13774089 + X_13774084_13774089_+ 1 1 1 0 rdgB FBtr0301532 13773981 13775189 X + 13774000 13774106 3'utr rdgB FlyBase G61262.1 CTGGCGCTGCTAGAGACGATCCACTGTACAGAGCGCACCCACTGTAACGCCCGATCCTCGCTGTGTATATATGTATCCTGTGTTTGTGTTTAGTGTAAATAGGTCAA 8 13774085 0.991785123 5 6 64 0.888888889 0.903089987 0.111111111 0.125 0.222222222 8 1 0 8 X:13774000-13774106 6 rdgB FBtr0301532 13773981 13775189 TGTGTT 6mer3-8 dme-miR-317-3p X + 13774029 13774107 3'utr rdgB FlyBase G46264.1 AGAGCGCACCCACTGTAACGCCCGATCCTCGCTGTGTATATATGTATCCTGTGTTTGTGTTTAGTGTAAATAGGTCAAC 9 13774083 0.988262605 7 8 75 0.875 1.146128036 0.5625 0.666666667 0.8125 9 2 0 14 X:13774029-13774107 6 5 5320 FBgn0003218 381.5 8.42 12.83 0.01310616 0.593824228 0.389711613 -1 1 0 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 13774428 13774433 + X_13774428_13774433_+ 1 1 1 0 rdgB FBtr0301532|FBtr0301532|FBtr0301532 13773981|13773981|13773981 13775189|13775189|13775189 X + 13774388 13774453 3'utr rdgB FlyBase G61263.1 ATTCCATTGGAAACTGCTTTGTTGGTGTTTAGACATTTTTCTGTGACTTTCTGTTGTTCTCTGTTT 8 13774449 0.99426576 5 7 92 0.777777778 0.84509804 0.111111111 0.125 0.222222222 8 2 0 7 X:13774388-13774453 6 rdgB FBtr0301532|FBtr0301532|FBtr0301532 13773981|13773981|13773981 13775189|13775189|13775189 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X + 13774395 13774452 3'utr rdgB FlyBase G46265.1 TGGAAACTGCTTTGTTGGTGTTTAGACATTTTTCTGTGACTTTCTGTTGTTCTCTGTT 6 13774437 0.992424449 6 6 75 1 1 0.5 0.333333333 0.6 6 0 0 10 X:13774395-13774452 6 6 5321 FBgn0003218 381.5 8.42 12.83 0.015727392 0.712589074 0.467653936 -21 -9 -15 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC X 13774931 13774936 + X_13774931_13774936_+ 1 1 1 0 rdgB FBtr0301532|FBtr0340289|FBtr0331717 13773981|13774817|13774817 13775189|13774943|13774943 X + 13774918 13774941 5'utr rdgB FlyBase G61264.1 AATCTTCTCAAAACTAGTCCTTCA 11 13774938 0.806850848 3 10 66 0.875 1.146128036 0 0.454545455 0.625 11 2 0 14 X:13774918-13774941 6 rdgB FBtr0301532 13773981 13775189 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" X + 13774880 13774965 5'utr-coding rdgB FlyBase G46266.1 GCGTAAAAGTAACAGAAGCAATCTTCTTGTGTCTCACCAATCTTCTCAAAACTAGTCCTTCACGAATCGTATTGTACTTTATTTTA 10 13774921 0.980675 6 9 79 0.923076923 1.079181246 0 0.3 0.461538462 10 1 0 12 X:13774880-13774965 6 8 5322 FBgn0003218 381.5 8.42 12.83 0.020969856 0.950118765 0.623538581 -7 10 1.5 0.01 dme-miR-184-5p 6mer3-8 TGATAA X 13780045 13780050 - X_13780045_13780050_- 0.999999958 0.999999998 0.999999978 0 CtsB1 FBtr0073838|FBtr0346091 13780014|13779845 13780176|13780176 X - 13780015 13780130 3'utr CtsB1 FlyBase G67327.1 ATTTTCTATCATCCCTCCTTTTATTTTCATTCCGATTCGCAACTGACGTTTGTAGTTAATGTAAACAACCTAAACCTGATTGATAATAAAGTATTGTATATGACTGTGGAACTGTA 221 13780060 0.897414174 26 207 1495 0.925531915 1.51355052 0.088652482 0.20361991 0.375886525 221 14 7 261 X:13780015-13780130 6 CtsB1 FBtr0346091|FBtr0073838 13779845|13780014 13780176|13780176 TGATAA 6mer3-8 dme-miR-184-5p X - 13780015 13780130 3'utr CtsB1 FlyBase G50687.1 ATTTTCTATCATCCCTCCTTTTATTTTCATTCCGATTCGCAACTGACGTTTGTAGTTAATGTAAACAACCTAAACCTGATTGATAATAAAGTATTGTATATGACTGTGGAACTGTA 136 13780051 0.81546364 23 128 896 0.930348259 2.271841607 0.084577114 0.338235294 0.552238806 136 14 0 187 X:13780015-13780130 6 100.5 5323 FBgn0030521 559.3 47.37666667 71.83333333 0.179688897 2.121297404 1.399071926 10 1 5.5 0.01 dme-miR-283-5p 6mer3-8 TGATAT X 13780145 13780150 - X_13780145_13780150_- 1 1 1 0 CtsB1 FBtr0073838|FBtr0346091 13780014|13779845 13780176|13780176 X - 13780134 13780209 stop_codon CtsB1 FlyBase G67328.1 AGCTCCATTTCGGCGGGTCTGCCCAAGCTGTAAATGTTATATGTATTCCGGCATCAAGCTGATATATCAAAACCCC 31 13780150 0.972610876 8 29 169 0.941176471 1.505149978 0.088235294 0.096774194 0.176470588 31 2 0 32 X:13780134-13780209 6 CtsB1 FBtr0346091|FBtr0073838 13779845|13780014 13780176|13780176 TGATAT 6mer3-8 dme-miR-283-5p X - 13780134 13780204 stop_codon CtsB1 FlyBase G50688.1 CATTTCGGCGGGTCTGCCCAAGCTGTAAATGTTATATGTATTCCGGCATCAAGCTGATATATCAAAACCCC 24 13780150 0.958309393 7 24 116 1 1.505149978 0.09375 0.291666667 0.46875 24 0 0 32 X:13780134-13780204 6 22 5324 FBgn0030521 559.3 47.37666667 71.83333333 0.039334883 0.464363611 0.306264501 0 0 0 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 13807165 13807171 + X_13807165_13807171_+ 0.661615511 0.661615511 0.661615511 0 inaE FBtr0073826 13805478 13807627 X + 13807148 13807187 3'utr inaE FlyBase G61282.1 AATTATGTTAAACGTTATCTAGTCTAAGGCCAACTATCGC 7 13807172 0.973002182 4 7 45 1 0.84509804 0 0 0 7 0 0 7 X:13807148-13807187 7 inaE FBtr0073826 13805478 13807627 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X + 13807152 13807187 3'utr inaE FlyBase G46278.1 ATGTTAAACGTTATCTAGTCTAAGGCCAACTATCGC 5 13807172 0.970308173 3 4 29 1 0.903089987 0 0.4 0.625 5 0 0 8 X:13807152-13807187 7 5 5325 FBgn0261244 812.34 24.45 37.46 0.006155058 0.204498978 0.133475707 -7 -7 -7 0.01 dme-miR-277-3p 7mer-m8 TGCATTT X 13807495 13807501 + X_13807495_13807501_+ 0.620204266 0.620204266 0.620204266 0 inaE FBtr0073826 13805478 13807627 X + 13807483 13807520 3'utr inaE FlyBase G61284.1 ACAGATGTAATTTGCATTTCGTTTTCAAAATCTCCGTG 6 13807494 0.922686575 2 5 49 0.833333333 0.698970004 0.166666667 0 0 6 1 0 5 X:13807483-13807520 7 inaE FBtr0073826 13805478 13807627 TGCATTT 7mer-m8 dme-miR-277-3p X + 13807460 13807550 3'utr inaE FlyBase G46280.1 TGTCCATTTATTGTTTAAGTTGAACAGATGTAATTTGCATTTCGTTTTCAAAATCTCCGTGTTTAAATCACGCTCTCCAAATATCTCTTAT 11 13807494 0.984307269 9 11 90 1 1.204119983 0 0.272727273 0.5 11 0 0 16 X:13807460-13807550 7 5 5326 FBgn0261244 812.34 24.45 37.46 0.006155058 0.204498978 0.133475707 1 1 1 0.01 dme-miR-970-3p 6mer3-8 TCTTAT X 13807545 13807550 + X_13807545_13807550_+ 1 1 1 0 inaE FBtr0073826 13805478 13807627 X + 13807524 13807551 3'utr inaE FlyBase G61284.2 AAATCACGCTCTCCAAATATCTCTTATA 4 13807547 0.770351326 2 3 26 0.8 0.602059991 0 0.25 0.4 4 1 0 4 X:13807524-13807551 6 inaE FBtr0073826 13805478 13807627 TCTTAT 6mer3-8 dme-miR-970-3p X + 13807460 13807550 3'utr inaE FlyBase G46280.1 TGTCCATTTATTGTTTAAGTTGAACAGATGTAATTTGCATTTCGTTTTCAAAATCTCCGTGTTTAAATCACGCTCTCCAAATATCTCTTAT 11 13807547 0.984307269 9 11 90 1 1.204119983 0 0.272727273 0.5 11 0 0 16 X:13807460-13807550 6 3.5 5327 FBgn0261244 812.34 24.45 37.46 0.004308541 0.143149284 0.093432995 -2 -2 -2 0.01 dme-miR-8-3p 6mer2-7 AGTATT X 13813020 13813025 - X_13813020_13813025_- 1 1 1 0 Clic FBtr0073835 13812969 13813727 X - 13813005 13813052 3'utr Clic FlyBase G67337.1 AAAAGAAAATTAGAGGAGGAAATGAAGAGTATTTTTTGTATTTAAGTG 39 13813019 0.621321288 5 37 302 0.891304348 1.612783857 0.369565217 0.128205128 0.260869565 39 5 0 41 X:13813005-13813052 6 Clic FBtr0073835 13812969 13813727 AGTATT 6mer2-7 dme-miR-8-3p X - 13813004 13813045 3'utr Clic FlyBase G50696.1 AATTAGAGGAGGAAATGAAGAGTATTTTTTGTATTTAAGTGA 41 13813019 0.630970943 7 39 358 0.949152542 1.748188027 0.440677966 0.365853659 0.559322034 41 3 0 56 X:13813004-13813045 6 39.5 5328 FBgn0030529 12555.19667 953.18 1456.586667 0.003146108 0.041440232 0.027118194 -6 -6 -6 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT X 13813259 13813264 - X_13813259_13813264_- 1 1 1 0 Clic FBtr0073835 13812969 13813727 X - 13813258 13813373 3'utr Clic FlyBase G67338.1 ATTAAAACATTTGTGTTTGACATACAGATGTCCACAGGCAAACGCATGAATATAATTACGTAGCTCGCTGTCAATTAAAATGTATCGATCGCCTGAAGGAGCGCTTCCCGTTCCTT 22 13813280 0.971556067 12 21 126 0.961538462 1.397940009 0.076923077 0.181818182 0.307692308 22 1 0 25 X:13813258-13813373 6 Clic FBtr0073835 13812969 13813727 GTTCCT 6mer2-7 dme-miR-276a-3p X - 13813256 13813317 3'utr Clic FlyBase G50697.1 TACGTAGCTCGCTGTCAATTAAAATGTATCGATCGCCTGAAGGAGCGCTTCCCGTTCCTTTA 9 13813281 0.96930151 6 7 57 0.722222222 1.113943352 0.111111111 0.666666667 0.833333333 9 5 0 13 X:13813256-13813317 6 2.5 5329 FBgn0030529 12555.19667 953.18 1456.586667 0.000199121 0.002622799 0.001716341 16 17 16.5 0.01 dme-miR-1012-3p 6mer3-8 TTGACT X 13813411 13813416 - X_13813411_13813416_- 0.99968296 0.99961112 0.99964704 5.08E-05 Clic FBtr0073835 13812969 13813727 X - 13813391 13813444 3'utr Clic FlyBase G67339.1 ACACCAGCCACAATCTATCGAGAAGGCTTTGACTTACTTGGCCCGCCTGCATGT 32 13813407 0.960403298 7 30 198 0.95 1.579783597 0.3 0.1875 0.35 32 2 0 38 X:13813391-13813444 6 Clic FBtr0073835 13812969 13813727 TTGACT 6mer3-8 dme-miR-1012-3p X - 13813392 13813430 3'utr Clic FlyBase G50698.1 CTATCGAGAAGGCTTTGACTTACTTGGCCCGCCTGCATG 21 13813407 0.736937256 6 20 130 0.96 1.380211242 0.36 0.19047619 0.32 21 1 0 24 X:13813392-13813430 6 25.5 5330 FBgn0030529 12555.19667 953.18 1456.586667 0.002031032 0.026752555 0.017506682 -9 -9 -9 0.01 dme-miR-317-3p 6mer2-7 GTGTTC X 13813515 13813520 - X_13813515_13813520_- 1 1 1 0 Clic FBtr0073835|FBtr0346089 13812969|13813459 13813727|13813727 X - 13813483 13813537 3'utr Clic FlyBase G67340.1 AACAAGCATAACAACAAGTGTTCTTTAAGCAGCCGCGTTGCCTTTCTTCAGCTAT 16 13813513 0.666089203 7 16 104 1 1.278753601 0.052631579 0.1875 0.315789474 16 0 0 19 X:13813483-13813537 6 Clic FBtr0073835|FBtr0346089 13812969|13813459 13813727|13813727 GTGTTC 6mer2-7 dme-miR-317-3p X - 13813499 13813535 3'utr Clic FlyBase G50699.1 CAAGCATAACAACAAGTGTTCTTTAAGCAGCCGCGTT 6 13813514 0.968707713 3 6 37 1 1 0 0.5 0.7 6 0 0 10 X:13813499-13813535 6 9 5331 FBgn0030529 12555.19667 953.18 1456.586667 0.000716835 0.009442078 0.006178829 -7 -6 -6.5 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA X 13813597 13813603 - X_13813597_13813603_- 0.790767732 0.808818836 0.799793284 0.012764055 Clic FBtr0073835|FBtr0073835|FBtr0346089|FBtr0346089 13812969|13812969|13813459|13813459 13813727|13813727|13813727|13813727 X - 13813544 13813694 3'utr Clic FlyBase G67341.1 ACACATCAACTAATAGTATACAGCAATCGCAACCACAATATTTTGGACAATTTTACAACAGCAGCAACTCTGAGGACTATACATAGATGTATACTTAACGGATATAACTACCCATGCATATATTATATATAAATATATATATAAACCTACT 136 13813624 0.962455973 18 133 674 0.981012658 1.889301703 0.088607595 0.139705882 0.259493671 136 2 1 155 X:13813544-13813694 7 Clic FBtr0073835|FBtr0073835|FBtr0346089|FBtr0346089 13812969|13812969|13813459|13813459 13813727|13813727|13813727|13813727 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" X - 13813556 13813694 3'utr Clic FlyBase G50700.1 ACACATCAACTAATAGTATACAGCAATCGCAACCACAATATTTTGGACAATTTTACAACAGCAGCAACTCTGAGGACTATACATAGATGTATACTTAACGGATATAACTACCCATGCATATATTATATATAAATATATA 80 13813624 0.999130588 16 80 367 1 2.10720997 0.1015625 0.4375 0.6484375 80 0 0 128 X:13813556-13813694 7 27 5332 FBgn0030529 12555.19667 953.18 1456.586667 0.002150504 0.028326234 0.018536487 21 21 21 0.01 dme-miR-34-5p 6mer3-8 CACTGC X 13830989 13830994 - X_13830989_13830994_- 1 1 1 0 AMPdeam FBtr0309245 13830739 13834641 X - 13830939 13831029 5'utr AMPdeam FlyBase G67368.1 TGTGCCAGAGATCCGTGTGGCCTATCGCTATGAGACACTGCTGGACGAGCTGTCCAACATCTTCAAGGTGAACCAGACGTGCTCCATTGCA 43 13830999 0.964693801 9 41 217 0.956521739 1.166331422 0.347826087 0.069767442 0.130434783 43 0 2 44 X:13830939-13831029 6 AMPdeam FBtr0309245 13830739 13834641 CACTGC 6mer3-8 dme-miR-34-5p X - 13830892 13831073 5'utr AMPdeam FlyBase G50720.2 TATTACGAGGACGGTATCATGGGCAACGACATCACGCGCACCAATGTGCCAGAGATCCGTGTGGCCTATCGCTATGAGACACTGCTGGACGAGCTGTCCAACATCTTCAAGGTGAACCAGACGTGCTCCATTGCAGACATGAACGCCACATAGTCTGGTCCATGCGGTACATCTGCTCCATC 53 13830999 0.982255174 20 47 249 0.966666667 1.638489257 0.244444444 0.452830189 0.677777778 53 2 1 87 X:13830892-13831073 6 29.5 5333 FBgn0052626 1047.716667 41.85666667 63.94666667 0.028156467 0.704786175 0.461321935 5 5 5 0.01 dme-miR-8-3p 6mer2-7 AGTATT X 13831402 13831407 - X_13831402_13831407_- 1 1 1 0 AMPdeam FBtr0309245 13830739 13834641 X - 13831344 13831525 5'utr AMPdeam FlyBase G67370.1 CTGTTGCGCAAAGTGCCCGTGCTGCAGTATCTGTATTATCTGACCCAGATTGGCATCGCCATGTCGCCGCTGTCGAACAACTCCCTGTTCCTCAACTATCATCGCAATCCGCTGCCAGAGTATTTGGCCCGTGGCCTCATCATTTCCCTCTCCACGGATGATCCCTTGCAATTCCACTTCAC 103 13831418 0.855457579 23 98 665 0.960629921 1.785329835 0.173228346 0.184466019 0.338582677 103 4 1 122 X:13831344-13831525 6 AMPdeam FBtr0309245 13830739 13834641 AGTATT 6mer2-7 dme-miR-8-3p X - 13831386 13831521 5'utr AMPdeam FlyBase G50721.1 TGCGCAAAGTGCCCGTGCTGCAGTATCTGTATTATCTGACCCAGATTGGCATCGCCATGTCGCCGCTGTCGAACAACTCCCTGTTCCTCAACTATCATCGCAATCCGCTGCCAGAGTATTTGGCCCGTGGCCTCAT 53 13831418 0.86398262 14 46 322 0.886075949 1.84509804 0.215189873 0.377358491 0.582278481 53 9 0 70 X:13831386-13831521 6 34.5 5334 FBgn0052626 1047.716667 41.85666667 63.94666667 0.03292875 0.824241459 0.539512093 11 11 11 0.01 dme-miR-8-3p 6mer3-8 CAGTAT X 13831496 13831501 - X_13831496_13831501_- 1 1 1 0 AMPdeam FBtr0309245 13830739 13834641 X - 13831344 13831525 5'utr AMPdeam FlyBase G67370.1 CTGTTGCGCAAAGTGCCCGTGCTGCAGTATCTGTATTATCTGACCCAGATTGGCATCGCCATGTCGCCGCTGTCGAACAACTCCCTGTTCCTCAACTATCATCGCAATCCGCTGCCAGAGTATTTGGCCCGTGGCCTCATCATTTCCCTCTCCACGGATGATCCCTTGCAATTCCACTTCAC 103 13831496 0.855457579 23 98 665 0.960629921 1.785329835 0.173228346 0.184466019 0.338582677 103 4 1 122 X:13831344-13831525 6 AMPdeam FBtr0309245 13830739 13834641 CAGTAT 6mer3-8 dme-miR-8-3p X - 13831386 13831521 5'utr AMPdeam FlyBase G50721.1 TGCGCAAAGTGCCCGTGCTGCAGTATCTGTATTATCTGACCCAGATTGGCATCGCCATGTCGCCGCTGTCGAACAACTCCCTGTTCCTCAACTATCATCGCAATCCGCTGCCAGAGTATTTGGCCCGTGGCCTCAT 53 13831496 0.86398262 14 46 322 0.886075949 1.84509804 0.215189873 0.377358491 0.582278481 53 9 0 70 X:13831386-13831521 6 22.5 5335 FBgn0052626 1047.716667 41.85666667 63.94666667 0.021475272 0.537548778 0.351855713 -5 -5 -5 0.01 dme-miR-190-5p 6mer3-8 ACATAT X 13831934 13831939 - X_13831934_13831939_- 1 1 1 0 AMPdeam FBtr0309245 13830739 13834641 X - 13831882 13832033 5'utr AMPdeam FlyBase G67374.1 AGCTCGAACATTCGCTGGCTGATCCAGATACCCCGTCTCTTCGACATCTTCAAGTCGAACAAGATGATGAAGTCATTCCAGGAGATCTTGAACAACATATTCCTGCCGCTCTTCGAGGCGACAGCCCGACCCAGTAAGCATCCCGAGTTGCA 67 13831934 0.921287659 18 66 386 0.988235294 1.924279286 0.211764706 0.208955224 0.376470588 67 1 0 84 X:13831882-13832033 6 AMPdeam FBtr0309245 13830739 13834641 ACATAT 6mer3-8 dme-miR-190-5p X - 13831842 13831971 5'utr AMPdeam FlyBase G50724.1 GATGATGAAGTCATTCCAGGAGATCTTGAACAACATATTCCTGCCGCTCTTCGAGGCGACAGCCCGACCCAGTAAGCATCCCGAGTTGCATCGCTTTCTGCAGTACGTGATCGGATTCGATTCGGTGGAC 52 13831934 0.971567735 14 48 283 0.950617284 1.58546073 0.333333333 0.403846154 0.617283951 52 3 1 77 X:13831842-13831971 6 31.5 5336 FBgn0052626 1047.716667 41.85666667 63.94666667 0.03006538 0.752568289 0.492597998 -5 -5 -5 0.01 dme-miR-305-5p 8mer-m1 AGTACAAT X 13832301 13832308 - X_13832301_13832308_- 0.570363044 0.570363044 0.570363044 0 AMPdeam FBtr0309245 13830739 13834641 X - 13832279 13832366 5'utr AMPdeam FlyBase G67376.1 ATGTTGGACGTCCATGCCGATCGCAACACGTTCCATCGCTTCGACAAGTTTAACTCCAAGTACAATCCCATCGGGGAGTCGCGGCTCA 17 13832302 0.847476229 7 13 83 0.789473684 0.698970004 0.157894737 0.058823529 0.157894737 17 2 2 15 X:13832279-13832366 8 AMPdeam FBtr0309245 13830739 13834641 AGTACAAT 8mer-m1 dme-miR-305-5p X - 13832224 13832320 5'utr AMPdeam FlyBase G50726.1 AGTTTAACTCCAAGTACAATCCCATCGGGGAGTCGCGGCTCAGGGAAGTCTTCCTGAAGACGGACAACTATCTGAATGGCAAATACTTTGCACAGAT 12 13832297 0.957759835 9 12 60 1 1.278753601 0 0.416666667 0.631578947 12 0 0 19 X:13832224-13832320 8 7.5 5337 FBgn0052626 1047.716667 41.85666667 63.94666667 0.007158424 0.179182926 0.117285238 -6 -11 -8.5 0.01 dme-miR-305-5p 7mer-A1 GTACAAA X 13853450 13853456 - X_13853450_13853456_- 0.782911824 0.782911824 0.782911824 0 mamo FBtr0346001|FBtr0346002 13846114|13850846 13854098|13854098 X - 13853443 13853493 3'utr mamo FlyBase G67397.1 TTTACACCGATCTATAGAAGCTAACTAGCAACAATTTGTACAAAACAAACA 17 13853458 0.879365182 4 17 80 1 1.255272505 0.055555556 0.058823529 0.111111111 17 0 0 18 X:13853443-13853493 7 mamo FBtr0346001|FBtr0346002 13846114|13850846 13854098|13854098 GTACAAA 7mer-A1 dme-miR-305-5p X - 13853444 13853491 3'utr mamo FlyBase G50744.1 TACACCGATCTATAGAAGCTAACTAGCAACAATTTGTACAAAACAAAC 10 13853458 0.937335942 4 10 43 1 1.176091259 0 0.3 0.533333333 10 0 0 15 X:13853444-13853491 7 8.5 5338 FBgn0267033 6198.503333 82.32 126.9666667 0.001371299 0.103255588 0.066946705 2 2 2 0.01 dme-miR-282-5p 6mer2-7 GAGGCT X 13860274 13860279 - X_13860274_13860279_- 1 1 1 0 mamo FBtr0346003 13858015 13869553 X - 13860241 13860291 3'utr mamo FlyBase G67402.1 AAGTTCCCTATTGAGGCTCATTCATAAATAATTTTACGAATAATTTTTAAC 7 13860280 0.979979007 3 7 54 1 0.903089987 0 0.142857143 0.25 7 0 0 8 X:13860241-13860291 6 mamo FBtr0346003 13858015 13869553 GAGGCT 6mer2-7 dme-miR-282-5p X - 13860269 13860295 3'utr mamo FlyBase G50746.1 TTGTAAGTTCCCTATTGAGGCTCATTC 5 13860281 0.711883834 3 5 39 1 1.079181246 0 1 1 5 0 0 12 X:13860269-13860295 6 5.5 5339 FBgn0267033 6198.503333 82.32 126.9666667 0.000887311 0.066812439 0.043318456 1 2 1.5 0.01 dme-miR-1008-3p 7mer-A1 GCTGTGA X 13866926 13866932 - X_13866926_13866932_- 0.823349562 0.823349562 0.823349562 0 mamo FBtr0346003|FBtr0346006 13858015|13865860 13869553|13869553 X - 13866900 13866957 5'utr mamo FlyBase G67404.1 AAAAACTTTTGGATTAAACAATTTGGCTGTGATAGCATTACAAGAATAGTAAATAATT 71 13866934 0.985963621 9 68 568 0.964285714 1.908485019 0.071428571 0.154929577 0.285714286 71 3 0 81 X:13866900-13866957 7 mamo FBtr0346003|FBtr0346006 13858015|13865860 13869553|13869553 GCTGTGA 7mer-A1 dme-miR-1008-3p X - 13866900 13866949 5'utr mamo FlyBase G50747.1 TTGGATTAAACAATTTGGCTGTGATAGCATTACAAGAATAGTAAATAATT 38 13866934 0.869907644 8 35 255 0.9 1.176091259 0.18 0.263157895 0.44 38 3 2 45 X:13866900-13866949 7 53 5340 FBgn0267033 6198.503333 82.32 126.9666667 0.008550451 0.64382896 0.417432397 2 2 2 0.01 dme-bantam-3p 7mer-A1 GATCTCA X 13867332 13867338 - X_13867332_13867338_- 0.823349562 0.823349562 0.823349562 0 mamo FBtr0346003|FBtr0346006 13858015|13865860 13869553|13869553 X - 13867313 13867352 5'utr mamo FlyBase G67405.1 AAGAAATGCAAATCGATCTCAAAATTATAAACAAATGAAA 47 13867340 0.841370012 4 46 221 0.964285714 1.73239376 0.142857143 0.14893617 0.285714286 47 2 0 54 X:13867313-13867352 7 mamo FBtr0346003|FBtr0346006 13858015|13865860 13869553|13869553 GATCTCA 7mer-A1 dme-bantam-3p X - 13867320 13867393 5'utr mamo FlyBase G50748.1 ACTTAGGTGATTAGCCCGGCAACAACAGCAAACGAAACAACAAGAAATGCAAATCGATCTCAAAATTATAAACA 22 13867345 0.961314377 4 22 109 1 1.491361694 0.161290323 0.272727273 0.483870968 22 0 0 31 X:13867320-13867393 7 33.5 5341 FBgn0267033 6198.503333 82.32 126.9666667 0.00540453 0.406948494 0.263848779 2 7 4.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-m8 CTGTGAT X 13867828 13867834 - X_13867828_13867834_- 0.661615693 0.661545531 0.661580612 4.96E-05 mamo FBtr0346003|FBtr0346003|FBtr0346003|FBtr0346006|FBtr0346006|FBtr0346006 13858015|13858015|13858015|13865860|13865860|13865860 13869553|13869553|13869553|13869553|13869553|13869553 X - 13867806 13867864 5'utr mamo FlyBase G67406.1 AAGCAGCAGCAGCAGAATTACATAGAATATCTGTGATCTTAACGATATTTATAAAAAAC 126 13867835 0.987236358 7 118 1070 0.937062937 2.127104798 0.111888112 0.119047619 0.223776224 126 9 0 134 X:13867806-13867864 7 mamo FBtr0346003|FBtr0346003|FBtr0346003|FBtr0346006|FBtr0346006|FBtr0346006 13858015|13858015|13858015|13865860|13865860|13865860 13869553|13869553|13869553|13869553|13869553|13869553 CTGTGAT 7mer-m8 "dme-miR-2a-3p,dme-miR-2b-3p" X - 13867808 13867858 5'utr mamo FlyBase G50749.1 CAGCAGCAGAATTACATAGAATATCTGTGATCTTAACGATATTTATAAAAA 88 13867835 0.738477231 5 84 749 0.971223022 1.829303773 0.115107914 0.420454545 0.633093525 88 3 1 135 X:13867808-13867858 7 105.5 5342 FBgn0267033 6198.503333 82.32 126.9666667 0.017020238 1.281584062 0.830926752 1 1 1 0.01 dme-bantam-3p 6mer3-8 TGATCT X 13868609 13868614 - X_13868609_13868614_- 1 1 1 0 mamo FBtr0346003|FBtr0346006 13858015|13865860 13869553|13869553 X - 13868591 13868635 5'utr mamo FlyBase G67407.2 GCTAACTATAAATGATAAAATTGATCTAATTGAATACGATTTAGT 15 13868615 0.704346356 4 13 113 0.842105263 1.204119983 0.315789474 0.266666667 0.421052632 15 3 0 16 X:13868591-13868635 6 mamo FBtr0346003|FBtr0346006 13858015|13865860 13869553|13869553 TGATCT 6mer3-8 dme-bantam-3p X - 13868567 13868634 5'utr mamo FlyBase G50751.1 CTAACTATAAATGATAAAATTGATCTAATTGAATACGATTTAGTAATGCTAACGATAGCGATTAACGA 19 13868615 0.985029812 6 16 127 0.909090909 1 0.409090909 0.222222222 0.363636364 18 1 1 20 X:13868567-13868634 6 15 5343 FBgn0267033 6198.503333 82.32 126.9666667 0.002419939 0.182215743 0.118141244 1 1 1 0.01 dme-miR-190-5p 6mer3-8 ACATAT X 13868706 13868711 - X_13868706_13868711_- 1 1 1 0 mamo FBtr0346003|FBtr0346006 13858015|13865860 13869553|13869553 X - 13868692 13868733 5'utr mamo FlyBase G67408.1 AGTATATGTTAGAGAATGTAAGACATATAGGCAAGAATGAAA 28 13868717 0.835291029 4 28 150 1 1.505149978 0.5 0.107142857 0.21875 28 0 0 32 X:13868692-13868733 6 mamo FBtr0346003|FBtr0346006 13858015|13865860 13869553|13869553 ACATAT 6mer3-8 dme-miR-190-5p X - 13868694 13868728 5'utr mamo FlyBase G50752.1 ATGTTAGAGAATGTAAGACATATAGGCAAGAATGA 20 13868717 0.839197889 3 19 100 0.935483871 1.462397998 0.64516129 0.4 0.612903226 20 2 0 29 X:13868694-13868728 6 24 5344 FBgn0267033 6198.503333 82.32 126.9666667 0.003871902 0.29154519 0.189025991 6 6 6 0.01 dme-miR-1006-3p 6mer3-8 CGAATT X 13868995 13869000 - X_13868995_13869000_- 0.507200502 0.507200502 0.507200502 0 mamo FBtr0346003|FBtr0346006 13858015|13865860 13869553|13869553 X - 13868980 13869021 5'utr mamo FlyBase G67409.1 AATTATATAGCAGCATATTGTCGAATTGTTGAAGTTTATACC 5 13869004 0.664792619 3 5 48 1 0.698970004 0 0 0 5 0 0 5 X:13868980-13869021 6 mamo FBtr0346003|FBtr0346006 13858015|13865860 13869553|13869553 CGAATT 6mer3-8 dme-miR-1006-3p X - 13868986 13869015 5'utr mamo FlyBase G50753.1 ATAGCAGCATATTGTCGAATTGTTGAAGTT 6 13869004 0.71266717 2 5 36 0.666666667 0.77815125 0 0.333333333 0.555555556 6 3 0 6 X:13868986-13869015 6 5.5 5345 FBgn0267033 6198.503333 82.32 126.9666667 0.000887311 0.066812439 0.043318456 4 4 4 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA X 1392563 1392570 + X_1392563_1392570_+ 0.500120318 0.500120318 0.500120318 0 CG32813 FBtr0330319|FBtr0070222|FBtr0342737|FBtr0342736|FBtr0070219|FBtr0330317|FBtr0330320|FBtr0342735 1391564|1391564|1391564|1391564|1391564|1391564|1391564|1391564 1392843|1392843|1392843|1392843|1392843|1392843|1392843|1392843 X + 1392537 1392581 3'utr CG32813 FlyBase G57945.1 CATTGAAGGAACTGTAGCTAATTTATGTACTTAATGAACCAGTGA 26 1392562 0.752432733 2 26 255 1 1.462397998 0.172413793 0.115384615 0.206896552 26 0 0 29 X:1392537-1392581 8 CG32813 FBtr0342737|FBtr0330319|FBtr0342736|FBtr0330320|FBtr0070222|FBtr0330317|FBtr0070219|FBtr0342735 1391564|1391564|1391564|1391564|1391564|1391564|1391564|1391564 1392843|1392843|1392843|1392843|1392843|1392843|1392843|1392843 GTACTTAA 8mer-A1 dme-miR-252-5p X + 1392540 1392583 3'utr CG32813 FlyBase G43842.1 TGAAGGAACTGTAGCTAATTTATGTACTTAATGAACCAGTGAAA 22 1392562 0.72588109 3 22 203 1 1.568201724 0.108108108 0.363636364 0.621621622 22 0 0 37 X:1392540-1392583 8 24 5346 FBgn0052813 73.22 2.636666667 4.1 0.327779295 9.102402023 5.853658537 1 1 1 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC X 1392625 1392630 + X_1392625_1392630_+ 1 1 1 0 CG32813 FBtr0330319|FBtr0070222|FBtr0342737|FBtr0342736|FBtr0070219|FBtr0330317|FBtr0330320|FBtr0342735 1391564|1391564|1391564|1391564|1391564|1391564|1391564|1391564 1392843|1392843|1392843|1392843|1392843|1392843|1392843|1392843 X + 1392604 1392667 3'utr CG32813 FlyBase G57946.1 GGTGTAAAGAGAAGAAACTTGCTAGTCGCCGCTGCATAACTGTGTAAATGTGGCACACAAACCA 22 1392623 0.946083067 3 21 90 0.962962963 1.414973348 0.444444444 0.227272727 0.37037037 22 1 0 26 X:1392604-1392667 6 CG32813 FBtr0342737|FBtr0330319|FBtr0342736|FBtr0330320|FBtr0070222|FBtr0330317|FBtr0070219|FBtr0342735 1391564|1391564|1391564|1391564|1391564|1391564|1391564|1391564 1392843|1392843|1392843|1392843|1392843|1392843|1392843|1392843 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" X + 1392603 1392640 3'utr CG32813 FlyBase G43843.1 TGGTGTAAAGAGAAGAAACTTGCTAGTCGCCGCTGCAT 11 1392623 0.937397908 2 11 45 1 1.176091259 0.6 0.181818182 0.4 11 0 0 15 X:1392603-1392640 6 16 5347 FBgn0052813 73.22 2.636666667 4.1 0.21851953 6.068268015 3.902439024 2 2 2 0.01 dme-miR-34-5p 7mer-m8 CACTGCC X 1395468 1395474 + X_1395468_1395474_+ 0.708953382 0.708953382 0.708953382 0 CG11448 FBtr0332291|FBtr0070225 1395374|1395374 1397337|1397337 X + 1395397 1395496 3'utr CG11448 FlyBase G57951.1 TTGGCGTGCATTTCACTTTTCGTTTGTTTTCTGTTTTTCCGTTTCCGTTCCATTCCGTTCCGTTCCGTTTGCACTGCCCCCCGCACCCCTGCATCTTGCA 192 1395450 0.99058932 17 185 1899 0.948497854 1.566241023 0.201716738 0.1875 0.330472103 192 7 5 221 X:1395397-1395496 7 CG11448 FBtr0070225|FBtr0332291 1395374|1395374 1397337|1397337 CACTGCC 7mer-m8 dme-miR-34-5p X + 1395394 1395494 3'utr CG11448 FlyBase G43848.1 GAGTTGGCGTGCATTTCACTTTTCGTTTGTTTTCTGTTTTTCCGTTTCCGTTCCATTCCGTTCCGTTCCGTTTGCACTGCCCCCCGCACCCCTGCATCTTG 142 1395450 0.990163311 15 133 1333 0.936651584 1.713910354 0.199095023 0.401408451 0.615384615 142 11 3 207 X:1395394-1395494 7 46 5348 FBgn0024985 122.6666667 3.986666667 6.07 0.375 11.53846154 7.578253707 18 18 18 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG X 1395639 1395644 + X_1395639_1395644_+ 0.999999998 0.999999999 0.999999998 0 CG11448 FBtr0332291|FBtr0070225 1395374|1395374 1397337|1397337 X + 1395526 1395665 3'utr CG11448 FlyBase G57952.1 ACGTCTTACGATTACGTTTACATTTAGTTTAGGCAACAGCCTGTATCTGACCCTGTCCCTCGCCATTCACCTGCTCCGCCTGAGCTGTACATACATAGTTTACACACTCGATTGCTGTGCCCTCATAATTCTAAGTTGTT 1174 1395637 0.923214846 21 1166 9428 0.993621545 2.845718018 0.029057406 0.160988075 0.301913536 1174 8 1 1402 X:1395526-1395665 6 CG11448 FBtr0070225|FBtr0332291 1395374|1395374 1397337|1397337 GCTGTG 6mer2-7 dme-miR-1008-3p X + 1395526 1395664 3'utr CG11448 FlyBase G43849.1 ACGTCTTACGATTACGTTTACATTTAGTTTAGGCAACAGCCTGTATCTGACCCTGTCCCTCGCCATTCACCTGCTCCGCCTGAGCTGTACATACATAGTTTACACACTCGATTGCTGTGCCCTCATAATTCTAAGTTGT 807 1395637 0.90858251 22 799 6322 0.990909091 2.514547753 0.028030303 0.416356877 0.643181818 807 9 3 1308 X:1395526-1395664 6 945 5349 FBgn0024985 122.6666667 3.986666667 6.07 7.703804348 237.0401338 155.6836903 2 2 2 0.01 dme-miR-8-3p 6mer2-7 AGTATT X 1396151 1396156 + X_1396151_1396156_+ 0.999999984 1 0.999999992 0 CG11448 FBtr0332292|FBtr0332291|FBtr0070225 1395684|1395374|1395374 1397337|1397337|1397337 X + 1396078 1396190 3'utr CG11448 FlyBase G57956.1 CAATTATCCGTAGTGTAACTGTCCCTAAGACCCCTGCATCTATCTAGATCTTCGGCTATCGCCAGCCCGTATGAGTATTTTAGCACTCTCATAGCAGTTGCCCCAAGCGGCCT 17 1396176 0.98019726 10 16 112 0.9 0.77815125 0.1 0.176470588 0.3 17 0 2 18 X:1396078-1396190 6 CG11448 FBtr0070225|FBtr0332291|FBtr0332292 1395374|1395374|1395684 1397337|1397337|1397337 AGTATT 6mer2-7 dme-miR-8-3p X + 1396106 1396192 3'utr CG11448 FlyBase G43851.1 GACCCCTGCATCTATCTAGATCTTCGGCTATCGCCAGCCCGTATGAGTATTTTAGCACTCTCATAGCAGTTGCCCCAAGCGGCCTTA 10 1396176 0.969564705 6 10 59 1 1.079181246 0.333333333 0.2 0.333333333 10 0 0 12 X:1396106-1396192 6 4.5 5350 FBgn0024985 122.6666667 3.986666667 6.07 0.036684783 1.128762542 0.741350906 -25 -25 -25 0.01 dme-miR-986-5p 6mer2-7 TTCGAG X 1396553 1396558 + X_1396553_1396558_+ 1 1 1 0 CG11448 FBtr0332292|FBtr0332291|FBtr0070225 1395684|1395374|1395374 1397337|1397337|1397337 X + 1396529 1396594 3'utr CG11448 FlyBase G57958.1 CCACTCCACTTGAAGCCCAGTGATTTCGAGGAGATCTCAGTCCGATCCTCGTTCATAGCTAGTATC 47 1396553 0.692836088 6 45 251 0.982142857 1.439332694 0.160714286 0.14893617 0.285714286 47 0 1 55 X:1396529-1396594 6 CG11448 FBtr0070225|FBtr0332291|FBtr0332292 1395374|1395374|1395684 1397337|1397337|1397337 TTCGAG 6mer2-7 dme-miR-986-5p X + 1396536 1396580 3'utr CG11448 FlyBase G43852.1 ACTTGAAGCCCAGTGATTTCGAGGAGATCTCAGTCCGATCCTCGT 36 1396552 0.68024546 6 36 195 1 1.707570176 0.058823529 0.25 0.470588235 36 0 0 51 X:1396536-1396580 6 39 5351 FBgn0024985 122.6666667 3.986666667 6.07 0.317934783 9.782608696 6.425041186 0 1 0.5 0.01 dme-miR-980-5p 6mer3-8 GAAAAA X 1396917 1396922 + X_1396917_1396922_+ 1 1 1 0 CG11448 FBtr0332292|FBtr0332291|FBtr0070225 1395684|1395374|1395374 1397337|1397337|1397337 X + 1396893 1396945 3'utr CG11448 FlyBase G57960.1 ACGAGCGCGCAATGGCATCGATATGAAAAAGTGGACTAACGTTGAGTGGGTGA 17 1396924 0.956320303 3 15 83 0.894736842 1.230448921 0.263157895 0.117647059 0.210526316 17 2 0 17 X:1396893-1396945 6 CG11448 FBtr0070225|FBtr0332291|FBtr0332292 1395374|1395374|1395684 1397337|1397337|1397337 GAAAAA 6mer3-8 dme-miR-980-5p X + 1396878 1396944 3'utr CG11448 FlyBase G43854.1 TTTATAAAATTGAACACGAGCGCGCAATGGCATCGATATGAAAAAGTGGACTAACGTTGAGTGGGTG 13 1396924 0.935558189 5 13 49 1 1.301029996 0.15 0.461538462 0.65 13 0 0 20 X:1396878-1396944 6 11 5352 FBgn0024985 122.6666667 3.986666667 6.07 0.089673913 2.759197324 1.812191104 -7 -7 -7 0.01 dme-miR-8-3p 6mer2-7 AGTATT X 1396976 1396981 + X_1396976_1396981_+ 1 1 1 0 CG11448 FBtr0332292|FBtr0332291|FBtr0070225 1395684|1395374|1395374 1397337|1397337|1397337 X + 1396953 1397059 3'utr CG11448 FlyBase G57961.1 GAAAAGAAGATGGAGAGAAATTGAGTATTTGGTGAATTAATGTTAACTAAATTTATATACACATATACACATGCATTATACATAATATACTTTACTATATACTATGT 41 1396974 0.982932592 17 40 307 0.98 1.69019608 0.18 0.170731707 0.32 41 1 0 49 X:1396953-1397059 6 CG11448 FBtr0070225|FBtr0332291|FBtr0332292 1395374|1395374|1395684 1397337|1397337|1397337 AGTATT 6mer2-7 dme-miR-8-3p X + 1396956 1397012 3'utr CG11448 FlyBase G43855.1 AAGAAGATGGAGAGAAATTGAGTATTTGGTGAATTAATGTTAACTAAATTTATATAC 31 1396974 0.7763504 10 28 264 0.905660377 1.681241237 0.113207547 0.548387097 0.735849057 31 5 0 48 X:1396956-1397012 6 29.5 5353 FBgn0024985 122.6666667 3.986666667 6.07 0.24048913 7.399665552 4.859967051 2 2 2 0.01 dme-miR-12-5p 6mer3-8 AATACT X 13998719 13998724 + X_13998719_13998724_+ 1 1 1 0 ben FBtr0307296|FBtr0332844|FBtr0073855|FBtr0300566|FBtr0332843 13998615|13998615|13998615|13998615|13998615 13999805|13999805|13999805|13998767|13999805 X + 13998663 13998728 3'utr ben FlyBase G61309.1 ATCGGCGTTTTTCCAGAAAGTGGGTGCGTGACATGAACGGGCGGGTGGGTAAATTGAATACTTTAA 19 13998696 0.793534904 10 16 100 0.818181818 1.255272505 0.363636364 0.157894737 0.272727273 19 4 0 18 X:13998663-13998728 6 ben FBtr0300566|FBtr0332843|FBtr0332844|FBtr0073855|FBtr0307296 13998615|13998615|13998615|13998615|13998615 13998767|13999805|13999805|13999805|13999805 AATACT 6mer3-8 dme-miR-12-5p X + 13998663 13998738 3'utr ben FlyBase G46302.1 ATCGGCGTTTTTCCAGAAAGTGGGTGCGTGACATGAACGGGCGGGTGGGTAAATTGAATACTTTAAAAGCAACCAG 12 13998691 0.940056904 7 12 49 1 1.146128036 0.571428571 0.083333333 0.214285714 12 0 0 14 X:13998663-13998738 6 3 5354 FBgn0000173 1034.81 74.77333333 113.92 0.002899083 0.040121255 0.02633427 23 28 25.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 13999271 13999276 + X_13999271_13999276_+ 0.730949445 0.730949445 0.730949445 0 ben FBtr0307296|FBtr0307296|FBtr0307296|FBtr0332844|FBtr0332844|FBtr0332844|FBtr0073855|FBtr0073855|FBtr0073855|FBtr0332843|FBtr0332843|FBtr0332843 13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615 13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805 X + 13999254 13999295 3'utr ben FlyBase G61311.1 TTTCAGAAAATTTAAGATGTGATCGTCCAACTTGTAGACTTT 10 13999266 0.888634882 5 8 77 0.916666667 1.041392685 0 0.2 0.333333333 10 1 0 11 X:13999254-13999295 6 ben FBtr0332843|FBtr0332843|FBtr0332843|FBtr0332844|FBtr0332844|FBtr0332844|FBtr0073855|FBtr0073855|FBtr0073855|FBtr0307296|FBtr0307296|FBtr0307296 13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615 13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X + 13999257 13999298 3'utr ben FlyBase G46304.1 CAGAAAATTTAAGATGTGATCGTCCAACTTGTAGACTTTACT 9 13999267 0.850713566 5 9 61 1 1.230448921 0.176470588 0.666666667 0.823529412 9 0 0 17 X:13999257-13999298 6 8.5 5355 FBgn0000173 1034.81 74.77333333 113.92 0.008214068 0.11367689 0.074613764 5 4 4.5 0.01 dme-miR-14-3p 6mer3-8 AAGACT X 14204745 14204750 - X_14204745_14204750_- 0.999999715 0.989148535 0.994574125 0.007672957 l(1)G0469 FBtr0333428|FBtr0333429 14203959|14203959 14205285|14206316 X - 14204705 14204776 3'utr l(1)G0469 FlyBase G67423.1 CACACACACACACTGTGAAATTCGAAAAGACTTATTAAATATTTGTTTGTTTTTTTTTTTTCGTCCTAACTT 15 14204742 0.985111958 5 13 115 0.833333333 0.698970004 0.222222222 0.2 0.333333333 15 1 2 15 X:14204705-14204776 6 l(1)G0469 FBtr0333429|FBtr0333428 14203959|14203959 14206316|14205285 AAGACT 6mer3-8 dme-miR-14-3p X - 14204735 14204773 3'utr l(1)G0469 FlyBase G50762.1 ACACACACACTGTGAAATTCGAAAAGACTTATTAAATAT 13 14204742 0.767437366 3 12 61 0.923076923 1.079181246 0.615384615 0 0 13 1 0 12 X:14204735-14204773 6 11.5 5356 FBgn0040153 149.5566667 5.536666667 8.426666667 0.076893931 2.077062011 1.36471519 -8 -8 -8 0.01 dme-miR-34-5p 6mer3-8 CACTGC X 14232597 14232602 - X_14232597_14232602_- 1 1 1 0 CG42271 FBtr0299614 14232280 14232720 X - 14232569 14232634 3'utr CG42271 FlyBase G67434.1 AACCAAATATTTGGCCATGTCACTGTTCCACCCACTGCACCACATACCTCTCGCTCACTTCCATGC 27 14232609 0.972056489 6 27 157 1 1.491361694 0.193548387 0.111111111 0.225806452 27 0 0 31 X:14232569-14232634 6 CG42271 FBtr0299614 14232280 14232720 CACTGC 6mer3-8 dme-miR-34-5p X - 14232585 14232623 3'utr CG42271 FlyBase G50768.1 TGGCCATGTCACTGTTCCACCCACTGCACCACATACCTC 13 14232609 0.972223656 2 11 70 0.8 1.204119983 0.1 0.307692308 0.55 13 4 0 16 X:14232585-14232623 6 19 5357 FBgn0259166 258.3166667 15.79666667 24.03666667 0.073553132 1.202785398 0.790459021 7 7 7 0.01 dme-miR-8-3p 8mer-A1 CAGTATTA X 14258400 14258407 + X_14258400_14258407_+ 0.671698121 0.671698124 0.671698122 0 mud FBtr0332622|FBtr0308325|FBtr0308329|FBtr0308327|FBtr0308328 14258229|14258229|14258383|14258229|14256264 14258595|14258595|14258595|14258595|14258595 X + 14258367 14258474 stop_codon mud FlyBase G61371.1 ATGTTCAAGCGCAAGTAGGCGTGGTCGCAGTCGCAGTATTATACATATATTCCCCCATTCGTGTACATCAATCGGAACTTGAATTCTTGACTTATTATTTATGTAACC 48 14258397 0.985231866 14 47 391 0.980769231 1.707570176 0.057692308 0.083333333 0.153846154 48 1 0 51 X:14258367-14258474 8 mud FBtr0308327|FBtr0308325|FBtr0308329|FBtr0308328|FBtr0332622 14258229|14258229|14258383|14256264|14258229 14258595|14258595|14258595|14258595|14258595 CAGTATTA 8mer-A1 dme-miR-8-3p X + 14258374 14258474 stop_codon mud FlyBase G46345.1 AGCGCAAGTAGGCGTGGTCGCAGTCGCAGTATTATACATATATTCCCCCATTCGTGTACATCAATCGGAACTTGAATTCTTGACTTATTATTTATGTAACC 36 14258397 0.86437693 11 32 294 0.919354839 1.45484486 0.032258065 0.472222222 0.693548387 36 4 1 57 X:14258374-14258474 8 14.5 5358 FBgn0002873 2508.803333 43.92333333 67.46333333 0.005779648 0.330120665 0.214931568 3 3 3 0.01 dme-miR-1012-3p 6mer3-8 TTGACT X 14258453 14258458 + X_14258453_14258458_+ 1 1 1 0 mud FBtr0332622|FBtr0308325|FBtr0308329|FBtr0308327|FBtr0308328 14258229|14258229|14258383|14258229|14256264 14258595|14258595|14258595|14258595|14258595 X + 14258367 14258474 stop_codon mud FlyBase G61371.1 ATGTTCAAGCGCAAGTAGGCGTGGTCGCAGTCGCAGTATTATACATATATTCCCCCATTCGTGTACATCAATCGGAACTTGAATTCTTGACTTATTATTTATGTAACC 48 14258453 0.985231866 14 47 391 0.980769231 1.707570176 0.057692308 0.083333333 0.153846154 48 1 0 51 X:14258367-14258474 6 mud FBtr0308327|FBtr0308325|FBtr0308329|FBtr0308328|FBtr0332622 14258229|14258229|14258383|14256264|14258229 14258595|14258595|14258595|14258595|14258595 TTGACT 6mer3-8 dme-miR-1012-3p X + 14258374 14258474 stop_codon mud FlyBase G46345.1 AGCGCAAGTAGGCGTGGTCGCAGTCGCAGTATTATACATATATTCCCCCATTCGTGTACATCAATCGGAACTTGAATTCTTGACTTATTATTTATGTAACC 36 14258453 0.86437693 11 32 294 0.919354839 1.45484486 0.032258065 0.472222222 0.693548387 36 4 1 57 X:14258374-14258474 6 20 5359 FBgn0002873 2508.803333 43.92333333 67.46333333 0.007971928 0.455338848 0.296457335 0 0 0 0.01 dme-miR-33-5p 7mer-A1 AATGCAA X 14258564 14258570 + X_14258564_14258570_+ 0.782911824 0.782911824 0.782911824 0 mud FBtr0332622|FBtr0308325|FBtr0308329|FBtr0308327|FBtr0308328 14258229|14258229|14258383|14258229|14256264 14258595|14258595|14258595|14258595|14258595 X + 14258486 14258576 3'utr mud FlyBase G61372.1 TTTTGTACATCAGGACTTAGAGAGTTTAGTTTAAGTATGCATATGTTGCAGTGGTACAATATCGTGGGCGAACATAATAATGCAAATAAAA 13 14258563 0.963740803 7 12 66 0.923076923 1.079181246 0.230769231 0 0 13 1 0 12 X:14258486-14258576 7 mud FBtr0308327|FBtr0308325|FBtr0308329|FBtr0308328|FBtr0332622 14258229|14258229|14258383|14256264|14258229 14258595|14258595|14258595|14258595|14258595 AATGCAA 7mer-A1 dme-miR-33-5p X + 14258531 14258582 3'utr mud FlyBase G46346.2 TTGCAGTGGTACAATATCGTGGGCGAACATAATAATGCAAATAAAATTGTCT 10 14258563 0.970490291 5 9 43 0.823529412 1.146128036 0.176470588 0.5 0.705882353 10 3 0 14 X:14258531-14258582 7 8 5360 FBgn0002873 2508.803333 43.92333333 67.46333333 0.003188771 0.182135539 0.118582934 1 1 1 0.01 dme-miR-184-3p 8mer-A1 TCCGTCCA X 1455334 1455341 - X_1455334_1455341_- 0.368041426 0.392382365 0.380211896 0.017211686 CG14785 FBtr0070231 1455213 1455406 X - 1455313 1455369 3'utr CG14785 FlyBase G64003.1 ACTTCTGGGCAGTCGTGATTCTGTCAGTTCCGTCCATTGTCCTTTGCCGTGTCCATG 71 1455342 0.842382144 6 69 661 0.978947368 1.968482949 0.136842105 0.211267606 0.410526316 71 2 0 93 X:1455313-1455369 8 CG14785 FBtr0070231 1455213 1455406 TCCGTCCA 8mer-A1 dme-miR-184-3p X - 1455322 1455365 3'utr CG14785 FlyBase G48245.1 CTGGGCAGTCGTGATTCTGTCAGTTCCGTCCATTGTCCTTTGCC 34 1455342 0.818402752 4 33 305 0.958333333 1.662757832 0.1875 0.352941176 0.541666667 34 2 0 46 X:1455322-1455365 8 51 5361 FBgn0027795 22.33333333 1.63 2.503333333 2.28358209 31.28834356 20.37283622 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 1464404 1464409 - X_1464404_1464409_- 1 1 1 0 O-fut2 FBtr0070296 1464361 1464506 X - 1464384 1464433 3'utr O-fut2 FlyBase G64021.1 ATTCCGAACCACCTGCGATTGTGTACCAAAAATAAATCTAAAGCCAACAG 22 1464414 0.912667367 5 22 106 1 1.477121255 0.266666667 0.318181818 0.5 22 0 0 30 X:1464384-1464433 6 O-fut2 FBtr0070296 1464361 1464506 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X - 1464397 1464437 3'utr O-fut2 FlyBase G48258.1 CGGGATTCCGAACCACCTGCGATTGTGTACCAAAAATAAAT 9 1464414 0.932642957 4 9 37 1 1.079181246 0.333333333 0.222222222 0.416666667 9 0 0 12 X:1464397-1464437 6 13.5 5362 FBgn0027791 205.6766667 15.41 23.50333333 0.065637003 0.87605451 0.574386612 5 5 5 0.01 dme-miR-278-3p 6mer3-8 CCCACC X 1464488 1464493 - X_1464488_1464493_- 1 1 1 0 O-fut2 FBtr0070296 1464361 1464506 X - 1464460 1464560 stop_codon O-fut2 FlyBase G64022.1 ATTGTGTGGGCGGATGGCGATAGCGACAGCGAGGAAGATTCCGACCCGTACTGATCCATCTGTAGCTCCCACCTGACATCTCAAGACCTAGTTTTAAGTCC 29 1464487 0.970515767 8 28 161 0.96969697 1.505149978 0.151515152 0.103448276 0.212121212 29 1 0 32 X:1464460-1464560 6 O-fut2 FBtr0070296 1464361 1464506 CCCACC 6mer3-8 dme-miR-278-3p X - 1464461 1464539 stop_codon O-fut2 FlyBase G48259.1 AGCGACAGCGAGGAAGATTCCGACCCGTACTGATCCATCTGTAGCTCCCACCTGACATCTCAAGACCTAGTTTTAAGTC 15 1464522 0.937634486 4 14 58 0.96969697 1.505149978 0.121212121 0.6 0.818181818 15 1 0 32 X:1464461-1464539 6 11.5 5363 FBgn0027791 205.6766667 15.41 23.50333333 0.055913003 0.746268657 0.489292299 -6 29 11.5 0.01 dme-miR-184-3p 7mer-A1 CCGTCCA X 1472040 1472046 + X_1472040_1472046_+ 0.823349562 0.823349562 0.823349562 0 pck FBtr0070256|FBtr0070255|FBtr0100198 1471943|1471943|1471470 1472325|1472325|1472317 X + 1471940 1472107 stop_codon pck FlyBase G57966.1 TATAACAGCTGTCCGCCCGACTTCCATACATTCCGTTCCGATTGGATCTTAGCTTAAGTTTTCAGACGCAATCTCGTGCCTCGAATCTGCGCAATCGACGCCGTCCATAGTGCCTTTAACAATCGACCATATGTATCTATATACACGCCGACTCAGCCGAGATCAGCT 504 1472047 0.785294123 25 483 3064 0.962233169 1.989746366 0.330049261 0.176587302 0.318555008 504 18 5 586 X:1471940-1472107 7 pck FBtr0100198|FBtr0070256|FBtr0070255 1471470|1471943|1471943 1472317|1472325|1472325 CCGTCCA 7mer-A1 dme-miR-184-3p X + 1471999 1472135 3'utr pck FlyBase G43859.2 TTTCAGACGCAATCTCGTGCCTCGAATCTGCGCAATCGACGCCGTCCATAGTGCCTTTAACAATCGACCATATGTATCTATATACACGCCGACTCAGCCGAGATCAGCTCGTATCCGTTTGTAATTGTATTAAATAG 203 1472047 0.772995213 20 190 878 0.962427746 1.744292983 0.387283237 0.45320197 0.679190751 203 8 5 333 X:1471999-1472135 7 197 5364 FBgn0013720 59 5.533333333 8.376666667 3.338983051 35.60240964 23.51770792 -7 -7 -7 0.01 dme-bantam-3p 6mer3-8 TGATCT X 14788749 14788754 - X_14788749_14788754_- 1 1 1 0 rut FBtr0340467|FBtr0333656|FBtr0333655|FBtr0333654|FBtr0305581|FBtr0073992|FBtr0333657 14787476|14787476|14787476|14787476|14787476|14787476|14787476 14789669|14790548|14789669|14789669|14789669|14789669|14790548 X - 14788742 14788780 3'utr rut FlyBase G67465.1 CGCCCGTGCCCCACGCCAAGCGTCTTTGATCTTAAATGT 5 14788754 0.975080645 2 4 30 1 0.698970004 0.2 0 0 5 0 0 5 X:14788742-14788780 6 rut FBtr0073992|FBtr0333657|FBtr0333654|FBtr0305581|FBtr0333655|FBtr0340467|FBtr0333656 14787476|14787476|14787476|14787476|14787476|14787476|14787476 14789669|14790548|14789669|14789669|14789669|14789669|14790548 TGATCT 6mer3-8 dme-bantam-3p X - 14788739 14788767 3'utr rut FlyBase G50788.1 CGCCAAGCGTCTTTGATCTTAAATGTATG 8 14788754 0.695109832 2 8 61 1 1 0.1 0.25 0.4 8 0 0 10 X:14788739-14788767 6 6 5365 FBgn0003301 229.9033333 3.326666667 5.11 0.026097925 1.803607214 1.174168297 0 0 0 0.01 dme-miR-14-3p 6mer2-7 AGACTG X 14788934 14788939 - X_14788934_14788939_- 1 1 1 0 rut FBtr0340467|FBtr0333656|FBtr0333655|FBtr0333654|FBtr0305581|FBtr0073992|FBtr0333657 14787476|14787476|14787476|14787476|14787476|14787476|14787476 14789669|14790548|14789669|14789669|14789669|14789669|14790548 X - 14788922 14788961 3'utr rut FlyBase G67466.1 TTTAAGGCTATAAATTGCCCATAGACTGCTCCACCACCAT 24 14788940 0.847247003 4 23 114 0.964285714 1.431363764 0 0.125 0.25 24 1 0 27 X:14788922-14788961 6 rut FBtr0073992|FBtr0333657|FBtr0333654|FBtr0305581|FBtr0333655|FBtr0340467|FBtr0333656 14787476|14787476|14787476|14787476|14787476|14787476|14787476 14789669|14790548|14789669|14789669|14789669|14789669|14790548 AGACTG 6mer2-7 dme-miR-14-3p X - 14788924 14788951 3'utr rut FlyBase G50789.1 TAAATTGCCCATAGACTGCTCCACCACC 12 14788940 0.786874972 4 11 49 0.9375 1.176091259 0 0.25 0.4375 12 1 0 15 X:14788924-14788951 6 18 5366 FBgn0003301 229.9033333 3.326666667 5.11 0.078293776 5.410821643 3.522504892 1 1 1 0.01 dme-miR-282-5p 6mer2-7 GAGGCT X 1480438 1480443 + X_1480438_1480443_+ 1 1 1 0 rush FBtr0339589 1480188 1481420 X + 1480421 1480466 5'utr rush FlyBase G57986.1 AAGGACGTGCAAAATTTGAGGCTTATCGAGTTCTAAGTTGGGAGAG 31 1480437 0.761585231 4 30 208 0.972222222 1.544068044 0.027777778 0.161290323 0.277777778 31 1 0 35 X:1480421-1480466 6 rush FBtr0339589 1480188 1481420 GAGGCT 6mer2-7 dme-miR-282-5p X + 1480360 1480457 5'utr rush FlyBase G43870.1 TCTTCATTGCAAGACCTTCGGACCCAATTTCGGATCTTTCATTATACCTATGCGTTAGATAAAGGACGTGCAAAATTTGAGGCTTATCGAGTTCTAAG 21 1480437 0.979291784 8 20 140 1 1.505149978 0.125 0.428571429 0.625 21 0 0 32 X:1480360-1480457 6 22 5367 FBgn0025381 3553.903333 199.46 304.35 0.006190377 0.110297804 0.072285198 1 1 1 0.01 dme-miR-305-5p 7mer-A1 GTACAAA X 1481381 1481387 + X_1481381_1481387_+ 0.782911824 0.782911824 0.782911824 0 rush FBtr0070259|FBtr0339589 1480188|1480188 1481420|1481420 X + 1481262 1481420 3'utr rush FlyBase G57989.1 GTTCCCGTTTTTGGCGGATAAGAACCACTAAAATCGTATGTTTGGCGAGAGGATAAACTATATGGATATGTATACAACATAAGCAATTTGCAATTGCGATCATTAACTGTTTTCTATTTGTACAAAGCCCAAAAAACAATAAATTAATACTGTAAATTG 95 1481379 0.986358411 23 87 743 0.930434783 1.427323786 0.086956522 0.168421053 0.313043478 95 5 3 107 X:1481262-1481420 7 rush FBtr0070259|FBtr0339589 1480188|1480188 1481420|1481420 GTACAAA 7mer-A1 dme-miR-305-5p X + 1481018 1481399 3'utr rush FlyBase G43871.1 AACGGAAGCGATGCGAGCAGGAGGAGATTAAGGAGCTGCGCAAGATGACGGCATTCAAGGCTCGTCCGAATCCATTTAAATAGTGCTCGACGGAACCAATCGACTACCAAACGTTTGATAGCCCTGTCCAAATTTAAATGAAGTGAAGTCGATGCTACACATAATCGTGTTTACCGATGCATAGTTTTACCAGATTAACACAATTTTTGTCTCTTAACATTAACATTACTTTTACGCATATATCGTTCCCGTTTTTGGCGGATAAGAACCACTAAAATCGTATGTTTGGCGAGAGGATAAACTATATGGATATGTATACAACATAAGCAATTTGCAATTGCGATCATTAACTGTTTTCTATTTGTACAAAGCCCAAAAAACA 146 1481378 0.991576417 53 137 1106 0.948356808 2.305351369 0.079812207 0.363013699 0.563380282 146 11 0 202 X:1481018-1481399 7 31.5 5368 FBgn0025381 3553.903333 199.46 304.35 0.008863494 0.157926401 0.103499261 2 3 2.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA X 14827158 14827164 - X_14827158_14827164_- 0.823349562 0.823349562 0.823349562 0 CG14408 FBtr0073990|FBtr0339446|FBtr0305580|FBtr0340466 14827056|14827056|14827056|14826865 14827787|14827787|14827787|14827787 X - 14827148 14827183 3'utr CG14408 FlyBase G67476.1 AAAAGCAAATAACTAAATGCTAGTCAACAAAAACGA 41 14827166 0.734298194 3 40 160 0.978723404 1.662757832 0 0.12195122 0.234042553 41 1 0 46 X:14827148-14827183 7 CG14408 FBtr0340466|FBtr0305580|FBtr0339446|FBtr0073990 14826865|14827056|14827056|14827056 14827787|14827787|14827787|14827787 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X - 14827148 14827184 3'utr CG14408 FlyBase G50797.1 AAAAAGCAAATAACTAAATGCTAGTCAACAAAAACGA 29 14827166 0.747366754 2 27 114 0.952380952 1.602059991 0.047619048 0.310344828 0.523809524 29 2 0 40 X:14827148-14827184 7 35 5369 FBgn0030581 268.9266667 10.35333333 15.88666667 0.130147004 3.380553767 2.203105329 2 2 2 0.01 dme-miR-31a-5p 7mer-m8 TCTTGCC X 14851077 14851083 - X_14851077_14851083_- 0.661615243 0.661615243 0.661615243 0 CG9521 FBtr0073985 14851003 14851256 X - 14851047 14851176 3'utr CG9521 FlyBase G67488.1 ATCACACCTTAAATGCAATGGCCAGTGTAAAATGGGGCTTTAGTTTTAGTTAAGGCCTTCGAAAACTTTTTGTTATTATGTGTAGTAATTCTTTCTTGCCTGAACTGATTCTAGTTTAAGATTTAGTTAT 85 14851081 0.898483573 19 72 801 0.848484848 1.62324929 0.090909091 0.141176471 0.262626263 85 14 1 84 X:14851047-14851176 7 CG9521 FBtr0073985 14851003 14851256 TCTTGCC 7mer-m8 dme-miR-31a-5p X - 14851039 14851103 3'utr CG9521 FlyBase G50803.1 TATTATGTGTAGTAATTCTTTCTTGCCTGAACTGATTCTAGTTTAAGATTTAGTTATATAAGCAT 45 14851081 0.613340139 11 43 437 0.948275862 1.740362689 0.103448276 0.244444444 0.413793103 45 3 0 55 X:14851039-14851103 7 47 5370 FBgn0030588 765.0066667 37.97666667 54.6 0.061437373 1.237602036 0.860805861 -2 -2 -2 0.01 dme-miR-308-3p 7mer-m1 TGTGATT X 14934583 14934589 - X_14934583_14934589_- 0.521223855 0.521223855 0.521223855 0 pdgy FBtr0303294|FBtr0343521|FBtr0073972|FBtr0308838 14933668|14934038|14934038|14934038 14934629|14934629|14934629|14934629 X - 14934576 14934612 3'utr pdgy FlyBase G67498.1 CTTCGTAGGCTAAGAAATATTTTTGTGATTTTTTTTT 21 14934591 0.701898922 5 21 265 1 1.397940009 0.12 0.142857143 0.28 21 0 0 25 X:14934576-14934612 7 pdgy FBtr0303294|FBtr0343521|FBtr0073972|FBtr0308838 14933668|14934038|14934038|14934038 14934629|14934629|14934629|14934629 TGTGATT 7mer-m1 dme-miR-308-3p X - 14934578 14934613 3'utr pdgy FlyBase G50810.1 TCTTCGTAGGCTAAGAAATATTTTTGTGATTTTTTT 10 14934591 0.677574682 6 10 121 1 1.113943352 0 0.3 0.461538462 10 0 0 13 X:14934578-14934613 7 15 5371 FBgn0027601 126.1633333 5.696666667 8.713333333 0.118893498 2.633118783 1.721499617 2 2 2 0.01 dme-miR-92b-3p 7mer-A1 TGCAATA X 15010170 15010176 - X_15010170_15010176_- 0.782911824 0.782911824 0.782911824 0 hiw FBtr0346087 15010135 15010831 X - 15010164 15010204 3'utr hiw FlyBase G67499.1 TATTTTATGAATGCGACGAACGGAAGAATGCAATAAAAATC 15 15010171 0.725687124 6 12 52 0.8125 1.113943352 0.0625 0.066666667 0.125 15 3 0 13 X:15010164-15010204 7 hiw FBtr0346087 15010135 15010831 TGCAATA 7mer-A1 dme-miR-92b-3p X - 15010164 15010203 3'utr hiw FlyBase G50812.1 ATTTTATGAATGCGACGAACGGAAGAATGCAATAAAAATC 17 15010171 0.740985298 5 17 54 1 1.361727836 0.347826087 0.294117647 0.47826087 17 0 0 23 X:15010164-15010203 7 15.5 5372 FBgn0030600 813.3333333 5.783333333 8.796666667 0.019057377 2.680115274 1.762031072 -5 -5 -5 0.01 dme-miR-932-5p 8mer-A1 GGAATTGA X 15032858 15032865 + X_15032858_15032865_+ 0.674982804 0.674982804 0.674982804 0 be FBtr0073956 15032682 15042060 X + 15032797 15032874 3'utr be FlyBase G61413.1 ATGTAGCGGATATTGATTATTCAATATTTATGATGTAAAGCGACATCGCCAAAATGGTCTCGGAATTGATAATTGTTA 168 15032851 0.94541202 6 168 708 1 2.269512944 0.064516129 0.095238095 0.182795699 168 0 0 186 X:15032797-15032874 8 be FBtr0073956 15032682 15042060 GGAATTGA 8mer-A1 dme-miR-932-5p X + 15032830 15032876 3'utr be FlyBase G46374.1 TGTAAAGCGACATCGCCAAAATGGTCTCGGAATTGATAATTGTTAAT 105 15032851 0.889864131 2 105 417 1 2.204119983 0.01875 0.371428571 0.5875 105 0 0 160 X:15032830-15032876 8 134 5373 FBgn0052594 1740.783333 62.23 95.48 0.07697684 2.153302266 1.403435274 7 7 7 0.01 dme-miR-14-3p 7mer-A1 AGACTGA X 15032899 15032905 + X_15032899_15032905_+ 0.823349562 0.823349562 0.823349562 0 be FBtr0073956 15032682 15042060 X + 15032880 15032919 3'utr be FlyBase G61414.1 ATTAAAATAACCTTTGCAGAGACTGACCCAAATCCTCAGG 15 15032893 0.65624085 5 12 74 0.842105263 0.726998728 0.157894737 0.2 0.368421053 15 1 2 16 X:15032880-15032919 7 be FBtr0073956 15032682 15042060 AGACTGA 7mer-A1 dme-miR-14-3p X + 15032883 15032915 3'utr be FlyBase G46375.1 AAAATAACCTTTGCAGAGACTGACCCAAATCCT 11 15032893 0.596280687 5 10 47 0.961538462 1.397940009 0 0.545454545 0.807692308 11 1 0 25 X:15032883-15032915 7 13 5374 FBgn0052594 1740.783333 62.23 95.48 0.007467902 0.208902459 0.136154168 6 6 6 0.01 dme-bantam-3p 6mer3-8 TGATCT X 15032981 15032986 + X_15032981_15032986_+ 1 1 1 0 be FBtr0073956 15032682 15042060 X + 15032937 15032995 3'utr be FlyBase G61415.1 GAAATACCTATTGAAAAAAACATGAAATACGCTAAACGAAACTTTGATCTGTATATAAA 20 15032981 0.972342583 7 20 118 1 1.342422681 0.090909091 0.05 0.136363636 20 0 0 22 X:15032937-15032995 6 be FBtr0073956 15032682 15042060 TGATCT 6mer3-8 dme-bantam-3p X + 15032949 15032995 3'utr be FlyBase G46376.1 GAAAAAAACATGAAATACGCTAAACGAAACTTTGATCTGTATATAAA 16 15032989 0.878212254 5 16 90 1 1.414973348 0 0.375 0.615384615 16 0 0 26 X:15032949-15032995 6 13.5 5375 FBgn0052594 1740.783333 62.23 95.48 0.007755129 0.216937169 0.141390867 0 -8 -4 0.01 dme-miR-263a-5p 6mer2-7 TGCCAT X 15033706 15033711 + X_15033706_15033711_+ 1 1 1 0 be FBtr0073956 15032682 15042060 X + 15033684 15033726 5'utr be FlyBase G61417.1 AGCCGTCGACGACGGCCAATTATGCCATCCCCGTTTGGAGGTC 19 15033705 0.730773617 4 19 107 1 1.322219295 0.19047619 0.052631579 0.142857143 19 0 0 21 X:15033684-15033726 6 be FBtr0073956 15032682 15042060 TGCCAT 6mer2-7 dme-miR-263a-5p X + 15033691 15033727 5'utr be FlyBase G46378.1 GACGACGGCCAATTATGCCATCCCCGTTTGGAGGTCC 9 15033706 0.932382037 3 9 49 1 1.079181246 0.25 0.333333333 0.5 9 0 0 12 X:15033691-15033727 6 14 5376 FBgn0052594 1740.783333 62.23 95.48 0.008042356 0.224971879 0.146627566 1 0 0.5 0.01 dme-miR-276a-3p 6mer3-8 AGTTCC X 15033843 15033848 + X_15033843_15033848_+ 1 1 1 0 be FBtr0073956 15032682 15042060 X + 15033800 15033888 5'utr be FlyBase G61418.1 AGAGCTGTCAAGGATTTGCGGCAGGCTCTGCAGAACTCCCCACAGTTCCATCCCAACCAGCTGACCTCAACGCGCAACCAAAGACAAAT 84 15033845 0.93775947 7 81 315 0.967032967 1.944482672 0.076923077 0.071428571 0.142857143 84 3 0 88 X:15033800-15033888 6 be FBtr0073956 15032682 15042060 AGTTCC 6mer3-8 dme-miR-276a-3p X + 15033815 15033878 5'utr be FlyBase G46379.1 TTGCGGCAGGCTCTGCAGAACTCCCCACAGTTCCATCCCAACCAGCTGACCTCAACGCGCAACC 34 15033845 0.871013476 3 30 122 0.955555556 1.633468456 0.133333333 0.323529412 0.488888889 34 2 0 43 X:15033815-15033878 6 49.5 5377 FBgn0052594 1740.783333 62.23 95.48 0.028435474 0.795436285 0.51843318 -2 -2 -2 0.01 dme-miR-283-5p 7mer-m8 TGATATT X 15041738 15041744 + X_15041738_15041744_+ 0.620203677 0.620203677 0.620203677 0 be FBtr0073957|FBtr0073956 15034089|15032682 15042060|15042060 X + 15041627 15041845 3'utr be FlyBase G61420.1 ATATATATATACCTATGAATCTGCCACAATCTGTCACACCTGCCAGCCACAAAAAAGAGTATAAGATGAGTGAATGATTAGAGAGAAACAAAAAATACCGAAAACACAATGTGATATTCTCTGGATATGCGATGAACTGAGGAGACCTACGCATATACCTAATTAGCTAGGGAGAAGCGAACTAGGAGATATAAACCATAAGCTAGATTAAGTGAATTA 581 15041743 0.948861065 38 533 2628 0.91954023 2.028028724 0.202586207 0.166953528 0.304597701 581 51 5 640 X:15041627-15041845 7 be FBtr0073957|FBtr0073956 15034089|15032682 15042060|15042060 TGATATT 7mer-m8 dme-miR-283-5p X + 15041628 15041842 3'utr be FlyBase G46381.1 TATATATATACCTATGAATCTGCCACAATCTGTCACACCTGCCAGCCACAAAAAAGAGTATAAGATGAGTGAATGATTAGAGAGAAACAAAAAATACCGAAAACACAATGTGATATTCTCTGGATATGCGATGAACTGAGGAGACCTACGCATATACCTAATTAGCTAGGGAGAAGCGAACTAGGAGATATAAACCATAAGCTAGATTAAGTGAA 367 15041743 0.955283087 36 335 1540 0.91005291 2.11058971 0.218694885 0.386920981 0.603174603 367 48 3 516 X:15041628-15041842 7 157.5 5378 FBgn0052594 1740.783333 62.23 95.48 0.09047651 2.530933633 1.649560117 -5 -5 -5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 15051306 15051311 + X_15051306_15051311_+ 1 1 1 0 CG5541 FBtr0073959|FBtr0073958 15051108|15051108 15051842|15051842 X + 15051275 15051338 3'utr CG5541 FlyBase G61430.1 ACAGAACCACCAATGCGTGACCTTTCGCTGTACCAAAACCATAGCCTACAGTTAGTCGTAATAT 21 15051316 0.962332074 6 20 118 0.956521739 1.342422681 0.130434783 0.095238095 0.173913043 21 1 0 22 X:15051275-15051338 6 CG5541 FBtr0073959|FBtr0073958 15051108|15051108 15051842|15051842 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 15051274 15051339 3'utr CG5541 FlyBase G46391.1 TACAGAACCACCAATGCGTGACCTTTCGCTGTACCAAAACCATAGCCTACAGTTAGTCGTAATATA 19 15051304 0.964291202 8 19 99 1 1.397940009 0.2 0.263157895 0.44 19 0 0 25 X:15051274-15051339 6 15.5 5379 FBgn0030603 416.6633333 20.09 30.71333333 0.037200298 0.771528123 0.504666811 -10 2 -4 0.01 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT X 15051502 15051508 + X_15051502_15051508_+ 0.620204031 0.620204031 0.620204031 0 CG5541 FBtr0073959|FBtr0073958 15051108|15051108 15051842|15051842 X + 15051485 15051531 3'utr CG5541 FlyBase G61432.1 AATTTAAAGCCAAAATGTGGTGCTCTTAAATGTATATGCTACATATG 42 15051501 0.845618218 7 41 330 0.960784314 1.69019608 0.176470588 0.19047619 0.333333333 42 2 0 49 X:15051485-15051531 7 CG5541 FBtr0073959|FBtr0073958 15051108|15051108 15051842|15051842 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" X + 15051485 15051522 3'utr CG5541 FlyBase G46393.1 AATTTAAAGCCAAAATGTGGTGCTCTTAAATGTATATG 11 15051501 0.78149501 4 10 73 0.941176471 1.204119983 0.235294118 0.454545455 0.647058824 11 1 0 16 X:15051485-15051522 7 26.5 5380 FBgn0030603 416.6633333 20.09 30.71333333 0.063600509 1.319064211 0.862817452 1 1 1 0.01 dme-miR-34-5p 8mer-A1 CACTGCCA X 15064479 15064486 + X_15064479_15064486_+ 0.678407974 0.678407974 0.678407974 0 CG5548 FBtr0073960|FBtr0340425|FBtr0340424 15064402|15064402|15064402 15064548|15064548|15064926 X + 15064455 15064524 3'utr CG5548 FlyBase G61434.1 AGGCGACGCTCCTGGCCGCGGATTCACTGCCACTGCCCCATGTTGCAAGCTAGTTTCCAGCGGAAATGTC 23 15064477 0.954425967 5 23 104 1 1.491361694 0.193548387 0.217391304 0.419354839 23 0 0 31 X:15064455-15064524 8 CG5548 FBtr0340424 15064402 15064926 CACTGCCA 8mer-A1 dme-miR-34-5p X + 15064462 15064502 3'utr CG5548 FlyBase G46394.1 GCTCCTGGCCGCGGATTCACTGCCACTGCCCCATGTTGCAA 8 15064477 0.960478759 3 7 34 0.909090909 1 0.181818182 0.25 0.454545455 8 1 0 10 X:15064462-15064502 8 14 5381 FBgn0030605 769.6633333 180.22 277.04 0.018189771 0.077682832 0.050534219 2 2 2 0.01 dme-miR-79-3p 8mer-A1 TAGCTTTA X 15068873 15068880 + X_15068873_15068880_+ 0.625364009 0.625364009 0.625364009 0 dob FBtr0073961 15068864 15069091 X + 15068844 15068903 stop_codon dob FlyBase G61437.1 GGGGACATCCGGTGTTCATTAGGCGCCATTAGCTTTATCAGCGATCGTCCCATCGATCGG 37 15068872 0.984102479 2 34 270 0.931818182 1.612783857 0.25 0.162162162 0.295454545 37 3 0 41 X:15068844-15068903 8 dob FBtr0073961 15068864 15069091 TAGCTTTA 8mer-A1 dme-miR-79-3p X + 15068861 15068892 stop_codon dob FlyBase G46397.1 ATTAGGCGCCATTAGCTTTATCAGCGATCGTC 14 15068872 0.85355754 3 14 97 1 1.342422681 0.181818182 0.5 0.681818182 14 0 0 22 X:15068861-15068892 8 25 5382 FBgn0030607 31.33333333 1.986666667 2.963333333 0.79787234 12.58389262 8.436445444 1 1 1 0.01 dme-miR-1008-3p 7mer-A1 GCTGTGA X 15069030 15069036 + X_15069030_15069036_+ 0.820449263 0.810619675 0.815534469 0.006950577 dob FBtr0073961 15068864 15069091 X + 15069011 15069045 3'utr dob FlyBase G61438.1 TTTTTTTTATGTACTGACTGCTGTGAACAAAATAA 28 15069030 0.699729444 5 27 166 0.966666667 1.462397998 0.033333333 0.071428571 0.133333333 28 1 0 29 X:15069011-15069045 7 dob FBtr0073961 15068864 15069091 GCTGTGA 7mer-A1 dme-miR-1008-3p X + 15069019 15069048 3'utr dob FlyBase G46398.1 ATGTACTGACTGCTGTGAACAAAATAAATT 23 15069030 0.691427492 4 22 114 0.972972973 1.556302501 0 0.47826087 0.675675676 23 1 0 36 X:15069019-15069048 7 25.5 5383 FBgn0030607 31.33333333 1.986666667 2.963333333 0.813829787 12.83557047 8.605174353 0 0 0 0.01 dme-miR-980-3p 6mer2-7 GCAGCT X 15082310 15082315 + X_15082310_15082315_+ 0.997415664 0.997170755 0.997293209 0.00017317 CG33177 FBtr0073962 15082192 15082369 X + 15082267 15082326 3'utr CG33177 FlyBase G61443.1 AGGTTTTGGGTGCTCATTTTCAGTGAAACGTATGGTTAATTTAGCAGCTTTTGTCCTATA 11 15082316 0.990071182 7 11 109 1 1.079181246 0.166666667 0.090909091 0.166666667 11 0 0 12 X:15082267-15082326 6 CG33177 FBtr0073962 15082192 15082369 GCAGCT 6mer2-7 dme-miR-980-3p X + 15082245 15082334 3'utr CG33177 FlyBase G46401.1 AGCACCAGTGATGTCAAGGTACAGGTTTTGGGTGCTCATTTTCAGTGAAACGTATGGTTAATTTAGCAGCTTTTGTCCTATAAGTAGGAA 7 15082317 0.989282418 7 7 65 1 1.146128036 0.214285714 0.571428571 0.785714286 7 0 0 14 X:15082245-15082334 6 6.5 5384 FBgn0053177 17.33333333 2.496666667 3.806666667 0.375 2.603471295 1.707530648 -6 -7 -6.5 0.01 dme-miR-282-5p 6mer2-7 GAGGCT X 15088285 15088290 + X_15088285_15088290_+ 0.99999999 1 0.999999995 0 CG5599 FBtr0073964 15088247 15088629 X + 15088245 15088314 stop_codon CG5599 FlyBase G61446.1 CTAGAGAGCCTATTACTCGAAAACGCTTACTTTTACGGATGAGGCTCTTTCCCATGCATTTATCTAGACA 251 15088284 0.929656086 13 245 2070 0.975945017 2.152288344 0.024054983 0.147410359 0.264604811 251 6 1 284 X:15088245-15088314 6 CG5599 FBtr0073964 15088247 15088629 GAGGCT 6mer2-7 dme-miR-282-5p X + 15088259 15088316 3'utr CG5599 FlyBase G46405.1 ACTCGAAAACGCTTACTTTTACGGATGAGGCTCTTTCCCATGCATTTATCTAGACATA 163 15088284 0.911829466 11 159 1299 0.97260274 2.328379603 0.146118721 0.282208589 0.465753425 163 6 0 213 X:15088259-15088316 6 200.5 5385 FBgn0030612 84.33666667 5.47 8.336666667 2.377376388 36.65447898 24.05037985 1 1 1 0.01 dme-miR-277-3p 8mer-A1 TGCATTTA X 15088496 15088503 + X_15088496_15088503_+ 0.625363972 0.473797014 0.549580493 0.107174054 CG5599 FBtr0073964 15088247 15088629 X + 15088477 15088509 3'utr CG5599 FlyBase G61448.1 ACTTTTATCGTTGTTAACCTGCATTTATATATC 11 15088490 0.665580778 4 11 110 1 1.041392685 0.090909091 0 0 11 0 0 11 X:15088477-15088509 8 CG5599 FBtr0073964 15088247 15088629 TGCATTTA 8mer-A1 dme-miR-277-3p X + 15088485 15088508 3'utr CG5599 FlyBase G46407.1 CGTTGTTAACCTGCATTTATATAT 8 15088489 0.667608041 4 5 79 0.727272727 0.602059991 0 0.375 0.545454545 8 2 1 8 X:15088485-15088508 8 9.5 5386 FBgn0030612 84.33666667 5.47 8.336666667 0.112643769 1.736745887 1.139544182 6 7 6.5 0.01 dme-miR-79-3p 6mer2-7 AGCTTT X 15088583 15088588 + X_15088583_15088588_+ 1 1 1 0 CG5599 FBtr0073964 15088247 15088629 X + 15088572 15088625 3'utr CG5599 FlyBase G61449.1 ATTTATATTAAAGCTTTGTTTCAATGGCTGTCCAATAAATATCAGAAACGGTTT 49 15088596 0.920474372 7 46 406 0.968253968 1.484299839 0 0.224489796 0.396825397 49 1 1 61 X:15088572-15088625 6 CG5599 FBtr0073964 15088247 15088629 AGCTTT 6mer2-7 dme-miR-79-3p X + 15088559 15088616 3'utr CG5599 FlyBase G46408.1 TGTAACCGCATGCATTTATATTAAAGCTTTGTTTCAATGGCTGTCCAATAAATATCAG 32 15088596 0.985536064 3 31 260 0.979166667 1.672097858 0.020833333 0.40625 0.604166667 32 1 0 47 X:15088559-15088616 6 31 5387 FBgn0030612 84.33666667 5.47 8.336666667 0.367574404 5.667276051 3.718512595 -13 -13 -13 0.01 dme-miR-317-3p 8mer-A1 TGTGTTCA X 1515756 1515763 + X_1515756_1515763_+ 0.631136783 0.631136783 0.631136783 0 inc FBtr0339591|FBtr0070260|FBtr0339590 1515389|1515389|1515389 1517615|1517615|1517137 X + 1515734 1515805 3'utr inc FlyBase G57995.1 ACGAAGTGTGTGCGGGCGTGCATGTGTTCAACTTGTAGTAAACCAGATAGACCCGACTGTACGAGCAACAAG 45 1515756 0.944432882 8 43 296 0.965517241 1.748188027 0.172413793 0.266666667 0.431034483 45 2 0 56 X:1515734-1515805 8 inc FBtr0070260|FBtr0339590|FBtr0339591 1515389|1515389|1515389 1517615|1517137|1517615 TGTGTTCA 8mer-A1 dme-miR-317-3p X + 1515734 1515794 3'utr inc FlyBase G43877.1 ACGAAGTGTGTGCGGGCGTGCATGTGTTCAACTTGTAGTAAACCAGATAGACCCGACTGTA 21 1515756 0.980218697 4 21 146 1 1.491361694 0.322580645 0.380952381 0.580645161 21 0 0 31 X:1515734-1515794 8 30 5388 FBgn0025394 956.7333333 41.24 63.02 0.0313567 0.727449079 0.476039353 0 0 0 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA X 1516418 1516423 + X_1516418_1516423_+ 1 0.999999936 0.999999968 7.07E-08 inc FBtr0339591|FBtr0070260|FBtr0339590 1515389|1515389|1515389 1517615|1517615|1517137 X + 1516319 1516438 3'utr inc FlyBase G57997.1 GTTTTGTGTAGGCCCGGTTTTACTACCTTGAGCTTTATTTTAGAAAACGAGCAAGGCGAAGATCAACTTTAGGAAATCAATTGAATCACGACTGAATTTATGTGAACTTGCACTCAAAGA 22 1516416 0.983555366 11 20 159 0.884615385 1.06069784 0.115384615 0.090909091 0.230769231 22 2 1 23 X:1516319-1516438 6 inc FBtr0070260|FBtr0339590|FBtr0339591 1515389|1515389|1515389 1517615|1517137|1517615 ATGTGA 6mer3-8 dme-miR-1003-3p X + 1516388 1516476 3'utr inc FlyBase G43879.1 TAGGAAATCAATTGAATCACGACTGAATTTATGTGAACTTGCACTCAAAGAAAATACATACATGCGAATACATTATAGTGAGGATATAC 21 1516400 0.974942179 12 21 129 1 1.51851394 0.121212121 0.428571429 0.636363636 21 0 0 33 X:1516388-1516476 6 11.5 5389 FBgn0025394 956.7333333 41.24 63.02 0.012020068 0.27885548 0.182481752 2 18 10 0.01 dme-miR-283-5p 6mer3-8 TGATAT X 1516544 1516549 + X_1516544_1516549_+ 1 1 1 0 inc FBtr0339591|FBtr0070260|FBtr0339590 1515389|1515389|1515389 1517615|1517615|1517137 X + 1516505 1516576 3'utr inc FlyBase G57998.1 AATGAAAACCTATCCGGCGACGTTTTGTACAGACAGGCATGATATCTATAATATGATAAGTACTACATGAAT 17 1516544 0.891303933 9 17 95 1 1.361727836 0.130434783 0.294117647 0.47826087 17 0 0 23 X:1516505-1516576 6 inc FBtr0070260|FBtr0339590|FBtr0339591 1515389|1515389|1515389 1517615|1517137|1517615 TGATAT 6mer3-8 dme-miR-283-5p X + 1516512 1516558 3'utr inc FlyBase G43880.1 ACCTATCCGGCGACGTTTTGTACAGACAGGCATGATATCTATAATAT 7 1516544 0.970438185 4 7 40 1 1.113943352 0 0.428571429 0.692307692 7 0 0 13 X:1516512-1516558 6 6.5 5390 FBgn0025394 956.7333333 41.24 63.02 0.006793952 0.157613967 0.10314186 0 0 0 0.01 dme-miR-1012-3p 6mer3-8 TTGACT X 1516684 1516689 + X_1516684_1516689_+ 0.705874937 0.999998883 0.85293691 0.207977075 inc FBtr0339591|FBtr0070260|FBtr0339590 1515389|1515389|1515389 1517615|1517615|1517137 X + 1516624 1516728 3'utr inc FlyBase G57999.1 AGCGAAAATTGAAGATGATCCAGAACGTCGCCACCTACTCGTACCCATTTTGTATCCATTTTGACTTATTTTACGAGCACAGCTGGTGCAGATTATATAGAGTAT 14 1516683 0.983791318 9 12 95 0.9375 0.875061263 0.125 0.071428571 0.1875 14 0 1 15 X:1516624-1516728 6 inc FBtr0070260|FBtr0339590|FBtr0339591 1515389|1515389|1515389 1517615|1517137|1517615 TTGACT 6mer3-8 dme-miR-1012-3p X + 1516671 1516765 3'utr inc FlyBase G43881.1 TTTTGTATCCATTTTGACTTATTTTACGAGCACAGCTGGTGCAGATTATATAGAGTATAACTTATGCTTACGAGGATTATTTCGACGAAGAACCT 8 1516684 0.986567326 5 7 66 1 1 0.2 0.25 0.4 8 0 0 10 X:1516671-1516765 6 3.5 5391 FBgn0025394 956.7333333 41.24 63.02 0.003658282 0.084869059 0.055537924 1 0 0.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 15317813 15317819 + X_15317813_15317819_+ 0.754172549 0.750473891 0.75232322 0.002615305 gce FBtr0310308|FBtr0310308|FBtr0310308|FBtr0303199|FBtr0303199|FBtr0303199|FBtr0303198|FBtr0303198|FBtr0303198|FBtr0331765|FBtr0331765|FBtr0331765 15317764|15317764|15317764|15317764|15317764|15317764|15317764|15317764|15317764|15317764|15317764|15317764 15319074|15319074|15319074|15319074|15319074|15319074|15319074|15319074|15319074|15319074|15319074|15319074 X + 15317750 15317841 stop_codon gce FlyBase G61467.1 GGACGACCAGGACTAGAGTGATGGAGAGCGCCCGATCGGGTCTCGACTGAAGGGTTTCATCGATGTGATATGTAACTACTGTCCTGGCAGTC 45 15317791 0.961321726 14 38 257 0.854166667 1.311753861 0.208333333 0.066666667 0.125 45 6 1 41 X:15317750-15317841 7 gce FBtr0303198|FBtr0303198|FBtr0303198|FBtr0331765|FBtr0331765|FBtr0331765|FBtr0310308|FBtr0310308|FBtr0310308|FBtr0303199|FBtr0303199|FBtr0303199 15317764|15317764|15317764|15317764|15317764|15317764|15317764|15317764|15317764|15317764|15317764|15317764 15319074|15319074|15319074|15319074|15319074|15319074|15319074|15319074|15319074|15319074|15319074|15319074 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X + 15317753 15317840 stop_codon gce FlyBase G46420.1 CGACCAGGACTAGAGTGATGGAGAGCGCCCGATCGGGTCTCGACTGAAGGGTTTCATCGATGTGATATGTAACTACTGTCCTGGCAGT 27 15317792 0.975468614 10 26 163 0.96969697 1.505149978 0.303030303 0.222222222 0.363636364 27 1 0 32 X:15317753-15317840 7 15 5392 FBgn0261703 2542.05 55.46 85.10666667 0.005900749 0.2704652 0.176249413 22 21 21.5 0.01 dme-miR-970-3p 7mer-A1 CTTATGA X 15317995 15318001 + X_15317995_15318001_+ 0.823349562 0.823349562 0.823349562 0 gce FBtr0310308|FBtr0303199|FBtr0303198|FBtr0331765 15317764|15317764|15317764|15317764 15319074|15319074|15319074|15319074 X + 15317967 15318040 3'utr gce FlyBase G61469.1 GATACGGATAGATAACCTTTAACCCCAACTTATGAGTGAGCCTGAGACAAGCATACTTTAGATACCCTGCCCAC 46 15318004 0.942364034 6 43 177 0.96 1.681241237 0.1 0.086956522 0.16 46 2 0 48 X:15317967-15318040 7 gce FBtr0303198|FBtr0331765|FBtr0310308|FBtr0303199 15317764|15317764|15317764|15317764 15319074|15319074|15319074|15319074 CTTATGA 7mer-A1 dme-miR-970-3p X + 15317928 15318054 3'utr gce FlyBase G46421.1 GATGGGTAACTGCTGCGGTACAGTTTAGGTACAGATACAGATACGGATAGATAACCTTTAACCCCAACTTATGAGTGAGCCTGAGACAAGCATACTTTAGATACCCTGCCCACATGCACACACTCAC 62 15318008 0.95257434 13 61 272 0.989247312 1.963787827 0.096774194 0.35483871 0.569892473 62 1 0 92 X:15317928-15318054 7 40 5393 FBgn0261703 2542.05 55.46 85.10666667 0.015735332 0.721240534 0.469998433 -9 -13 -11 0.01 dme-miR-14-3p 7mer-m8 AAGACTG X 15318511 15318517 + X_15318511_15318517_+ 0.671795832 0.671795832 0.671795832 0 gce FBtr0310308|FBtr0303199|FBtr0303198|FBtr0331765 15317764|15317764|15317764|15317764 15319074|15319074|15319074|15319074 X + 15318367 15318565 3'utr gce FlyBase G61472.1 AACACCCACAAAGGATTAAGATAATGATATAAGTAATGATTAGCGTAAATGGGAGGATTTAAACAATTATTATGCTAAATGAAATATACTATTAAAAACCTATGTACCATACGTTGTGCGTAATGCCCAAACTAAACGTGATAAAAGACTGTTACCAACTACATACACACATACATAATACCGAGATGGAAACAACCGT 1674 15318518 0.959445607 24 1640 7977 0.981445313 2.604226053 0.010253906 0.176821983 0.327148438 1674 34 4 2010 X:15318367-15318565 7 gce FBtr0303198|FBtr0331765|FBtr0310308|FBtr0303199 15317764|15317764|15317764|15317764 15319074|15319074|15319074|15319074 AAGACTG 7mer-m8 dme-miR-14-3p X + 15318450 15318565 3'utr gce FlyBase G46424.1 ATATACTATTAAAAACCTATGTACCATACGTTGTGCGTAATGCCCAAACTAAACGTGATAAAAGACTGTTACCAACTACATACACACATACATAATACCGAGATGGAAACAACCGT 1196 15318518 0.764379484 16 1165 5648 0.974330357 2.200651554 0.0078125 0.368729097 0.578683036 1196 36 10 1746 X:15318450-15318565 7 1378.5 5394 FBgn0261703 2542.05 55.46 85.10666667 0.542278869 24.85575189 16.19732101 -7 -7 -7 0.01 dme-miR-305-5p 8mer-m1 AGTACAAT X 15318814 15318821 + X_15318814_15318821_+ 0.570363044 0.570363044 0.570363044 0 gce FBtr0310308|FBtr0303199|FBtr0303198|FBtr0331765 15317764|15317764|15317764|15317764 15319074|15319074|15319074|15319074 X + 15318743 15318858 3'utr gce FlyBase G61474.1 AAGATAAATCCGGACGAATTGATGGATTTTGGCCAAGCACGGTGCACTGCATATATGTAGCAAGTGAGCCAAGTACAATTTACACAAATGTATACATAATTAGATGCATATATGGT 36 15318821 0.843914975 12 35 204 0.952380952 1.602059991 0.214285714 0.166666667 0.285714286 36 2 0 40 X:15318743-15318858 8 gce FBtr0303198|FBtr0331765|FBtr0310308|FBtr0303199 15317764|15317764|15317764|15317764 15319074|15319074|15319074|15319074 AGTACAAT 8mer-m1 dme-miR-305-5p X + 15318791 15318857 3'utr gce FlyBase G46426.1 GCATATATGTAGCAAGTGAGCCAAGTACAATTTACACAAATGTATACATAATTAGATGCATATATGG 20 15318821 0.724906956 7 19 110 0.935483871 1.462397998 0.096774194 0.45 0.64516129 20 2 0 29 X:15318791-15318857 8 17 5395 FBgn0261703 2542.05 55.46 85.10666667 0.006687516 0.306527227 0.199749334 -7 -7 -7 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 15319063 15319068 + X_15319063_15319068_+ 1 1 1 0 gce FBtr0310308|FBtr0303199|FBtr0303198|FBtr0331765 15317764|15317764|15317764|15317764 15319074|15319074|15319074|15319074 X + 15319040 15319080 3'utr gce FlyBase G61476.1 AATGTATTAGTGAATAAACTTGTGTACCTACATACAAAACA 42 15319062 0.73288839 4 41 324 0.956521739 1.643452676 0 0.095238095 0.173913043 42 2 0 44 X:15319040-15319080 6 gce FBtr0303198|FBtr0331765|FBtr0310308|FBtr0303199 15317764|15317764|15317764|15317764 15319074|15319074|15319074|15319074 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X + 15319043 15319079 3'utr gce FlyBase G46428.1 GTATTAGTGAATAAACTTGTGTACCTACATACAAAAC 32 15319062 0.707466968 4 31 236 0.960784314 1.213074825 0 0.5 0.68627451 32 0 2 49 X:15319043-15319079 6 37 5396 FBgn0261703 2542.05 55.46 85.10666667 0.014555182 0.667147494 0.434748551 1 1 1 0.01 dme-miR-988-3p 6mer3-8 ACAAGG X 15326062 15326067 + X_15326062_15326067_+ 1 1 1 0 Top1 FBtr0308699|FBtr0100294|FBtr0340434|FBtr0074006|FBtr0074005 15325917|15325917|15325917|15325917|15325917 15326956|15328029|15328029|15326530|15326956 X + 15326012 15326102 3'utr Top1 FlyBase G61495.1 CACACACTCGCACCCGATCGAAGAAGATGTAACAACAAACCACACCCACCACAAGGCCGGTTTATAAATAGATTCCATGCCAATCCCGCCA 38 15326073 0.916144337 5 38 123 1 1.69019608 0.020408163 0.236842105 0.408163265 38 0 0 49 X:15326012-15326102 6 Top1 FBtr0074005|FBtr0308699|FBtr0100294|FBtr0340434|FBtr0074006 15325917|15325917|15325917|15325917|15325917 15326956|15326956|15328029|15328029|15326530 ACAAGG 6mer3-8 dme-miR-988-3p X + 15326029 15326085 3'utr Top1 FlyBase G46440.1 TCGAAGAAGATGTAACAACAAACCACACCCACCACAAGGCCGGTTTATAAATAGATT 32 15326073 0.899856226 2 32 97 1 1.633468456 0 0.34375 0.511627907 32 0 0 43 X:15326029-15326085 6 32.5 5397 FBgn0004924 1711.443333 50.77666667 78.29333333 0.01898982 0.640057769 0.415105586 -11 -11 -11 0.01 dme-miR-92b-3p 7mer-m1 TGCAATT X 15326122 15326128 + X_15326122_15326128_+ 0.765586663 0.765586663 0.765586663 0 Top1 FBtr0308699|FBtr0100294|FBtr0340434|FBtr0074006|FBtr0074005 15325917|15325917|15325917|15325917|15325917 15326956|15328029|15328029|15326530|15326956 X + 15326116 15326251 3'utr Top1 FlyBase G61496.1 AGTTTATGCAATTGATAGTGCATATGTCCAGCTTTCGGCCAACGCAATGGGGGATTGTTAGCCAAAATGAGCGGGACGGAATGCTGCACTACATCGTAGTCGTGGAACCGCTTGTACGCGTCCGTTTTGTCTGCTT 13 15326120 0.999881194 10 13 75 1 1.278753601 0.157894737 0.307692308 0.526315789 13 0 0 19 X:15326116-15326251 7 Top1 FBtr0074005|FBtr0308699|FBtr0100294|FBtr0340434|FBtr0074006 15325917|15325917|15325917|15325917|15325917 15326956|15326956|15328029|15328029|15326530 TGCAATT 7mer-m1 dme-miR-92b-3p X + 15326116 15326141 3'utr Top1 FlyBase G46441.1 AGTTTATGCAATTGATAGTGCATATG 6 15326119 0.703578997 4 6 47 1 0.954242509 0.111111111 0.333333333 0.555555556 6 0 0 9 X:15326116-15326141 7 4.5 5398 FBgn0004924 1711.443333 50.77666667 78.29333333 0.00262936 0.088623383 0.057476158 2 3 2.5 0.01 dme-miR-970-3p 7mer-A1 CTTATGA X 15327101 15327107 + X_15327101_15327107_+ 0.789608577 0.823349562 0.80647907 0.02385849 Top1 FBtr0100294|FBtr0340434 15325917|15325917 15328029|15328029 X + 15327063 15327124 3'utr Top1 FlyBase G61499.1 TGGATGGATCTCGATGTGGTTTCGCTTTGATTTCGTACCTTATGATCATTTTAGTTAACATT 15 15327105 0.881818272 6 15 165 1 1.230448921 0 0.133333333 0.235294118 15 0 0 17 X:15327063-15327124 7 Top1 FBtr0100294|FBtr0340434 15325917|15325917 15328029|15328029 CTTATGA 7mer-A1 dme-miR-970-3p X + 15327051 15327124 3'utr Top1 FlyBase G46446.1 ACAAAGCCACATTGGATGGATCTCGATGTGGTTTCGCTTTGATTTCGTACCTTATGATCATTTTAGTTAACATT 14 15327105 0.964706856 6 14 143 1 1.397940009 0 0.357142857 0.64 14 0 0 25 X:15327051-15327124 7 10.5 5399 FBgn0004924 1711.443333 50.77666667 78.29333333 0.006135172 0.206787895 0.134111035 -4 -4 -4 0.01 dme-miR-190-5p 6mer3-8 ACATAT X 15327643 15327648 + X_15327643_15327648_+ 1 1 1 0 Top1 FBtr0100294|FBtr0340434 15325917|15325917 15328029|15328029 X + 15327593 15327655 3'utr Top1 FlyBase G61502.1 AAATGGCAAACGCGCATTGCAAATGAAGAGCGAACGATCTTTATATACATACATATAAACACA 36 15327634 0.969574268 6 36 203 1 1.653212514 0 0.222222222 0.377777778 36 0 0 45 X:15327593-15327655 6 Top1 FBtr0100294|FBtr0340434 15325917|15325917 15328029|15328029 ACATAT 6mer3-8 dme-miR-190-5p X + 15327615 15327660 3'utr Top1 FlyBase G46447.1 ATGAAGAGCGAACGATCTTTATATACATACATATAAACACACACAC 25 15327635 0.90512297 2 25 153 1 1.591064607 0 0.4 0.615384615 25 0 0 39 X:15327615-15327660 6 12 5400 FBgn0004924 1711.443333 50.77666667 78.29333333 0.007011626 0.236329023 0.153269755 9 8 8.5 0.01 dme-miR-283-5p 6mer3-8 TGATAT X 15327694 15327699 + X_15327694_15327699_+ 1 1 1 0 Top1 FBtr0100294|FBtr0340434 15325917|15325917 15328029|15328029 X + 15327675 15327756 3'utr Top1 FlyBase G61503.1 ACATATTATAATTAGTGATTGATATAATGTGAACGCAAACATCTGTGTGCGTTTGTCGTGGATTCGCATACGGAAGCGGGAG 11 15327696 0.978648405 7 11 80 1 1.079181246 0.25 0.090909091 0.166666667 11 0 0 12 X:15327675-15327756 6 Top1 FBtr0100294|FBtr0340434 15325917|15325917 15328029|15328029 TGATAT 6mer3-8 dme-miR-283-5p X + 15327666 15327712 3'utr Top1 FlyBase G46448.1 CGCCCAAACACATATTATAATTAGTGATTGATATAATGTGAACGCAA 7 15327694 0.979946123 3 7 51 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 X:15327666-15327712 6 6.5 5401 FBgn0004924 1711.443333 50.77666667 78.29333333 0.003797964 0.128011554 0.083021117 -2 0 -1 0.01 dme-bantam-3p 6mer3-8 TGATCT X 15340206 15340211 + X_15340206_15340211_+ 1 1 1 0 HDAC6 FBtr0074008|FBtr0301774|FBtr0330405|FBtr0074010|FBtr0307383|FBtr0074009 15340014|15339631|15340167|15340014|15340014|15340014 15340360|15340360|15340360|15340360|15340360|15340360 X + 15340181 15340242 3'utr HDAC6 FlyBase G61519.1 CAATCCTCTAGCCCGCACCCACAACTGATCTGAAAACTGCTGCAACTGGCAGCCGGTCGGTC 18 15340206 0.939116067 3 15 74 0.842105263 0.903089987 0.157894737 0.055555556 0.105263158 18 2 1 16 X:15340181-15340242 6 HDAC6 FBtr0074009|FBtr0307383|FBtr0074010|FBtr0330405|FBtr0301774|FBtr0074008 15340014|15340014|15340014|15340167|15339631|15340014 15340360|15340360|15340360|15340360|15340360|15340360 TGATCT 6mer3-8 dme-bantam-3p X + 15340189 15340230 3'utr HDAC6 FlyBase G46454.1 TAGCCCGCACCCACAACTGATCTGAAAACTGCTGCAACTGGC 6 15340206 0.930712466 2 4 15 0.909090909 0.698970004 0 0.333333333 0.636363636 6 0 1 10 X:15340189-15340230 6 10 5402 FBgn0026428 186.77 5.076666667 7.796666667 0.053541789 1.969796454 1.282599401 0 0 0 0.01 dme-bantam-3p 6mer3-8 TGATCT X 15340314 15340319 + X_15340314_15340319_+ 1 1 1 0 HDAC6 FBtr0074008|FBtr0301774|FBtr0330405|FBtr0074010|FBtr0307383|FBtr0074009 15340014|15339631|15340167|15340014|15340014|15340014 15340360|15340360|15340360|15340360|15340360|15340360 X + 15340268 15340331 3'utr HDAC6 FlyBase G61520.1 CACCATACCATTTATACAAATGCAAATTGTTAAAGTTATCAACTAATGATCTAATAAATAATTC 16 15340314 0.987328366 4 14 124 0.894736842 0.753327667 0 0.125 0.263157895 16 0 2 17 X:15340268-15340331 6 HDAC6 FBtr0074009|FBtr0307383|FBtr0074010|FBtr0330405|FBtr0301774|FBtr0074008 15340014|15340014|15340014|15340167|15339631|15340014 15340360|15340360|15340360|15340360|15340360|15340360 TGATCT 6mer3-8 dme-bantam-3p X + 15340295 15340326 3'utr HDAC6 FlyBase G46455.1 TGTTAAAGTTATCAACTAATGATCTAATAAAT 5 15340314 0.786498605 2 5 37 1 0.954242509 0 0.4 0.666666667 5 0 0 9 X:15340295-15340326 6 9.5 5403 FBgn0026428 186.77 5.076666667 7.796666667 0.0508647 1.871306632 1.218469431 0 0 0 0.01 dme-bantam-3p 7mer-A1 GATCTCA X 15381124 15381130 - X_15381124_15381130_- 0.823349562 0.823349562 0.823349562 0 CG9164 FBtr0074014|FBtr0074012|FBtr0343351 15380637|15380369|15380637 15381343|15381343|15381343 X - 15381107 15381147 3'utr CG9164 FlyBase G67543.1 CGACTCGTAGGACCATAGATCTCACTGGGGGTCAGCAAACA 14 15381132 0.895301659 2 13 56 0.941176471 1.204119983 0.235294118 0.142857143 0.294117647 14 1 0 16 X:15381107-15381147 7 CG9164 FBtr0074012|FBtr0343351|FBtr0074014 15380369|15380637|15380637 15381343|15381343|15381343 GATCTCA 7mer-A1 dme-bantam-3p X - 15381107 15381153 3'utr CG9164 FlyBase G50838.1 TCATCACGACTCGTAGGACCATAGATCTCACTGGGGGTCAGCAAACA 18 15381132 0.818915307 2 18 82 1 1.431363764 0.37037037 0.444444444 0.62962963 18 0 0 27 X:15381107-15381153 7 16 5404 FBgn0030634 21.68 1.186666667 1.78 0.73800738 13.48314607 8.988764045 2 2 2 0.01 dme-miR-2b-2-5p 6mer2-7 TGAAGA X 15446389 15446394 - X_15446389_15446394_- 1 1 1 0 Scamp FBtr0332591|FBtr0074079|FBtr0332592 15446177|15446177|15446177 15447421|15447421|15449232 X - 15446299 15446407 3'utr Scamp FlyBase G67549.1 TTATCTATGTACATGAAGACAGCATATAAAATATATTGATTCACTTAAGTATTCACATTTTTTAGATACATTTTGTTCGTTTCTGTTTTGCTTGCAAGTCAAACTTATT 9 15446400 0.968385623 8 9 76 1 1 0.1 0.111111111 0.2 9 0 0 10 X:15446299-15446407 6 Scamp FBtr0332592|FBtr0074079|FBtr0332591 15446177|15446177|15446177 15449232|15447421|15447421 TGAAGA 6mer2-7 dme-miR-2b-2-5p X - 15446377 15446415 3'utr Scamp FlyBase G50845.1 ATTATCTATTATCTATGTACATGAAGACAGCATATAAAA 7 15446400 0.979040594 2 6 42 1 1.041392685 0 0.428571429 0.636363636 7 0 0 11 X:15446377-15446415 6 5 5405 FBgn0040285 2407.336667 124.0333333 190.8666667 0.002076984 0.040311744 0.026196298 6 6 6 0.01 dme-miR-970-3p 6mer3-8 TCTTAT X 15446668 15446673 - X_15446668_15446673_- 1 1 1 0 Scamp FBtr0332591|FBtr0074079|FBtr0332592 15446177|15446177|15446177 15447421|15447421|15449232 X - 15446654 15446699 3'utr Scamp FlyBase G67553.1 ACACACACACACTCACATATATACGATCTTATATATATAACAAACA 59 15446680 0.749197201 7 57 509 0.974358974 1.880813592 0 0.254237288 0.435897436 59 2 0 76 X:15446654-15446699 6 Scamp FBtr0332592|FBtr0074079|FBtr0332591 15446177|15446177|15446177 15449232|15447421|15447421 TCTTAT 6mer3-8 dme-miR-970-3p X - 15446653 15446696 3'utr Scamp FlyBase G50847.1 CACACACACTCACATATATACGATCTTATATATATAACAAACAT 28 15446681 0.775085366 6 25 242 0.833333333 1 0 0.285714286 0.444444444 28 4 2 30 X:15446653-15446696 6 43 5406 FBgn0040285 2407.336667 124.0333333 190.8666667 0.017862063 0.346681 0.225288159 7 8 7.5 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA X 15447312 15447317 - X_15447312_15447317_- 1 1 1 0 Scamp FBtr0332591|FBtr0074079|FBtr0332592 15446177|15446177|15446177 15447421|15447421|15449232 X - 15447268 15447373 5'utr Scamp FlyBase G67556.1 TCAATCAACCACGAACTCAAGCAGCACTCATCCTGCTTAACTGGGACAGAAAAAGATGATGATAGCCGCGCCAGAGAGAGGGAGATGGAGAAAGAACACTTAATAA 17 15447313 0.926394401 10 16 51 0.947368421 1.255272505 0.105263158 0.058823529 0.157894737 17 1 0 18 X:15447268-15447373 6 Scamp FBtr0332592|FBtr0074079|FBtr0332591 15446177|15446177|15446177 15449232|15447421|15447421 TGATGA 6mer3-8 dme-miR-2a-2-5p X - 15447283 15447362 5'utr Scamp FlyBase G50850.1 CGAACTCAAGCAGCACTCATCCTGCTTAACTGGGACAGAAAAAGATGATGATAGCCGCGCCAGAGAGAGGGAGATGGAGA 10 15447311 0.980839122 6 8 24 0.928571429 0.812913357 0.214285714 0.3 0.5 10 0 1 13 X:15447283-15447362 6 6 5407 FBgn0040285 2407.336667 124.0333333 190.8666667 0.002492381 0.048374093 0.031435557 -4 -6 -5 0.01 dme-miR-277-3p 6mer2-7 GCATTT X 15452575 15452580 + X_15452575_15452580_+ 0.999999989 1 0.999999994 0 Ahcy13 FBtr0346181|FBtr0332590|FBtr0074030 15452476|15452476|15452476 15453167|15452646|15452646 X + 15452541 15452637 3'utr Ahcy13 FlyBase G61539.1 GACGACGGACCCACACTAGTTATCTATTGTCTGCGCATTTCACTGTTCACCTAAGCAGCTCCAATAAAAACCCATCTCACGTACTCTCAGCGAGAGA 29 15452586 0.980257045 12 28 198 0.944444444 1.531478917 0.222222222 0.24137931 0.388888889 29 2 0 34 X:15452541-15452637 6 Ahcy13 FBtr0074030|FBtr0346181|FBtr0332590 15452476|15452476|15452476 15452646|15453167|15452646 GCATTT 6mer2-7 dme-miR-277-3p X + 15452553 15452640 3'utr Ahcy13 FlyBase G46471.1 ACACTAGTTATCTATTGTCTGCGCATTTCACTGTTCACCTAAGCAGCTCCAATAAAAACCCATCTCACGTACTCTCAGCGAGAGAAAA 13 15452571 0.969405674 9 13 87 1 1.342422681 0.227272727 0.538461538 0.727272727 13 0 0 22 X:15452553-15452640 6 11 5408 FBgn0014455 1593.303333 111.8466667 171.19 0.006903896 0.09834893 0.06425609 -11 4 -3.5 0.01 dme-miR-304-5p 6mer3-8 TGAGAT X 15455404 15455409 + X_15455404_15455409_+ 1 1 1 0 CG11655 FBtr0074031 15455302 15455551 X + 15455369 15455423 3'utr CG11655 FlyBase G61544.1 AACCTATACATCGTGCTAGCGCACGTAGACAAGGCTGAGATAGATGCTGGTTAAA 29 15455409 0.79933232 7 25 151 0.882352941 1.477121255 0.235294118 0.137931034 0.264705882 29 4 0 30 X:15455369-15455423 6 CG11655 FBtr0074031 15455302 15455551 TGAGAT 6mer3-8 dme-miR-304-5p X + 15455375 15455421 3'utr CG11655 FlyBase G46474.1 TACATCGTGCTAGCGCACGTAGACAAGGCTGAGATAGATGCTGGTTA 12 15455409 0.957516628 3 12 60 1 1.544068044 0.285714286 0.833333333 0.942857143 12 0 0 35 X:15455375-15455421 6 19 5409 FBgn0030638 234.6666667 16.39 24.77666667 0.080965909 1.159243441 0.766850531 -5 -5 -5 0.01 dme-miR-986-5p 6mer3-8 ATTCGA X 15464923 15464928 + X_15464923_15464928_+ 1 1 1 0 CG6294 FBtr0308830 15464407 15465027 X + 15464888 15464945 5'utr CG6294 FlyBase G61549.1 TTTATTTATTGATAAGCCTTATCGCTGTTACTATGATTCGAAAATGCGTGATAGTTAA 11 15464932 0.9840066 5 10 80 0.928571429 1.113943352 0.071428571 0.272727273 0.428571429 11 1 0 13 X:15464888-15464945 6 CG6294 FBtr0308830 15464407 15465027 ATTCGA 6mer3-8 dme-miR-986-5p X + 15464905 15464945 5'utr CG6294 FlyBase G46481.1 CTTATCGCTGTTACTATGATTCGAAAATGCGTGATAGTTAA 5 15464932 0.979812771 3 5 35 1 0.903089987 0.125 0.6 0.75 5 0 0 8 X:15464905-15464945 6 7.5 5410 FBgn0030640 37.48 1.823333333 2.763333333 0.200106724 4.113345521 2.71411339 -9 -9 -9 0.01 dme-bantam-3p 7mer-A1 GATCTCA X 15485741 15485747 + X_15485741_15485747_+ 0.823349562 0.823349562 0.823349562 0 CG6340 FBtr0310060|FBtr0310061 15483273|15484567 15486612|15486612 X + 15485668 15485761 3'utr CG6340 FlyBase G61559.1 CGCGACTCCAGCAGCCGCTCCAGATCTCCGAAGGAAGAACAAGCCACAACACTTCGCGGTGGAGCTGTGGCCGGATCTCATATGCTGCTCGCTA 50 15485748 0.977626142 10 45 300 0.909090909 1.698970004 0.218181818 0.1 0.181818182 50 5 0 50 X:15485668-15485761 7 CG6340 FBtr0310060|FBtr0310061 15483273|15484567 15486612|15486612 GATCTCA 7mer-A1 dme-bantam-3p X + 15485705 15485782 3'utr CG6340 FlyBase G46489.1 AACAAGCCACAACACTTCGCGGTGGAGCTGTGGCCGGATCTCATATGCTGCTCGCTAAATCAGGCGGCGGAGCAGGAT 33 15485748 0.973872479 6 32 196 0.981132075 1.414973348 0.41509434 0.393939394 0.622641509 33 0 1 52 X:15485705-15485782 7 35 5411 FBgn0030648 403.1333333 30.77 47.32 0.086819911 1.137471563 0.73964497 -7 -7 -7 0.01 dme-miR-307a-3p 6mer2-7 GTTGTG X 15579482 15579487 + X_15579482_15579487_+ 1 1 1 0 CG7872 FBtr0074046 15579434 15579857 X + 15579424 15579549 stop_codon CG7872 FlyBase G61572.1 TTTGAGGATTAGCCGCTGCTCTGCGATGTTCAAGTTTCATTGTTCCATCTAAAAGTCTGTTGTGTGCGTGTTGTAAAACCGATCCCAAATTCCTCGCCCTCGGCATCCCCATACCGTCTAAATTTT 75 15579483 0.987354063 14 69 602 0.929411765 1.596597096 0.294117647 0.133333333 0.235294118 75 5 1 79 X:15579424-15579549 6 CG7872 FBtr0074046 15579434 15579857 GTTGTG 6mer2-7 dme-miR-307a-3p X + 15579461 15579550 3'utr CG7872 FlyBase G46500.1 CATTGTTCCATCTAAAAGTCTGTTGTGTGCGTGTTGTAAAACCGATCCCAAATTCCTCGCCCTCGGCATCCCCATACCGTCTAAATTTTG 50 15579483 0.919210266 12 44 381 0.907894737 1.236789099 0.315789474 0.34 0.565789474 50 4 3 69 X:15579461-15579550 6 38.5 5412 FBgn0030658 603.0033333 44.82333333 68.86333333 0.063847077 0.858927642 0.559078368 -1 -1 -1 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG X 15579766 15579771 + X_15579766_15579771_+ 1 1 1 0 CG7872 FBtr0074046 15579434 15579857 X + 15579759 15579788 3'utr CG7872 FlyBase G61575.1 ATACCCCTACCTGGCTGGTCACAAAAAAAG 11 15579774 0.729296415 4 11 36 1 1.204119983 0.1875 0.363636364 0.5625 11 0 0 16 X:15579759-15579788 6 CG7872 FBtr0074046 15579434 15579857 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" X + 15579755 15579847 3'utr CG7872 FlyBase G46501.1 AATTATACCCCTACCTGGCTGGTCACAAAAAAAGCACGCCACATTCGCGTGTTTCCTAACTAACTTGACTAAACCGATTACTGTAATAAACTA 31 15579774 0.936405065 8 30 144 0.98 1.69019608 0.28 0.483870968 0.68 31 1 0 49 X:15579755-15579847 6 13.5 5413 FBgn0030658 603.0033333 44.82333333 68.86333333 0.022387936 0.30118242 0.196040467 -8 -8 -8 0.01 dme-miR-1012-3p 8mer-A1 TTGACTAA X 15579819 15579826 + X_15579819_15579826_+ 0.627007348 0.627007274 0.627007311 0 CG7872 FBtr0074046 15579434 15579857 X + 15579805 15579850 3'utr CG7872 FlyBase G61576.1 GTTTCCTAACTAACTTGACTAAACCGATTACTGTAATAAACTAGAT 26 15579832 0.776903987 5 25 153 0.96875 1.491361694 0.03125 0.153846154 0.3125 26 1 0 31 X:15579805-15579850 8 CG7872 FBtr0074046 15579434 15579857 TTGACTAA 8mer-A1 dme-miR-1012-3p X + 15579755 15579847 3'utr CG7872 FlyBase G46501.1 AATTATACCCCTACCTGGCTGGTCACAAAAAAAGCACGCCACATTCGCGTGTTTCCTAACTAACTTGACTAAACCGATTACTGTAATAAACTA 31 15579833 0.936405065 8 30 144 0.98 1.69019608 0.28 0.483870968 0.68 31 1 0 49 X:15579755-15579847 8 19 5414 FBgn0030658 603.0033333 44.82333333 68.86333333 0.031508947 0.423886369 0.275908805 -13 -14 -13.5 0.01 dme-bantam-3p 6mer3-8 TGATCT X 15585131 15585136 + X_15585131_15585136_+ 1 0.999963758 0.999981879 2.56E-05 CG8097 FBtr0340344 15584989 15585249 X + 15585032 15585218 3'utr CG8097 FlyBase G61584.1 AAAAAACACAAAAACAAGAGGCTAATGCGAAACCATAGCAAAACTAAATGCTGGCTCAACAGTGGGCGGTAATAATATATGTAATAATATAATGACATGTGATCTTAAAAGGGCCATACAATATTGATATAACATAGTTACACCTCTCATTTTATCGATAATAATCAAAATATAGCAGTATCTACTT 122 15585131 0.965562643 23 120 637 0.986206897 2.155336037 0.131034483 0.147540984 0.282758621 122 2 0 143 X:15585032-15585218 6 CG8097 FBtr0340344 15584989 15585249 TGATCT 6mer3-8 dme-bantam-3p X + 15585026 15585179 3'utr CG8097 FlyBase G46509.1 AAAAAAAAAAAACACAAAAACAAGAGGCTAATGCGAAACCATAGCAAAACTAAATGCTGGCTCAACAGTGGGCGGTAATAATATATGTAATAATATAATGACATGTGATCTTAAAAGGGCCATACAATATTGATATAACATAGTTACACCTCTC 99 15585131 0.961362524 14 94 473 0.97260274 1.851258349 0.164383562 0.363636364 0.568493151 99 3 1 142 X:15585026-15585179 6 67 5415 FBgn0030660 130.6666667 8.276666667 12.6 0.512755102 8.095046315 5.317460317 0 0 0 0.01 dme-miR-8-3p 6mer2-7 AGTATT X 15585528 15585533 - X_15585528_15585533_- 1 1 1 0 CG9220 FBtr0074064|FBtr0340347 15585287|15585287 15585993|15585993 X - 15585494 15585530 3'utr CG9220 FlyBase G67612.1 ATTTTAATGGTTGGCAGTCCCTTAGAAATAATAAATT 8 15585509 0.711000156 4 8 55 1 0.903089987 0.125 0 0 8 0 0 8 X:15585494-15585530 3 CG9220 FBtr0074064|FBtr0340347 15585287|15585287 15585993|15585993 AGTATT 6mer2-7 dme-miR-8-3p X - 15585495 15585562 3'utr CG9220 FlyBase G50882.1 ATTGTATAGATAATTATTAGGAAATACAAAGTATTTTAATGGTTGGCAGTCCCTTAGAAATAATAAAT 11 15585519 0.980119835 6 11 76 1 1.204119983 0.3125 0.363636364 0.5625 11 0 0 16 X:15585495-15585562 6 3.5 5416 FBgn0030662 132.6 4.106666667 6.293333333 0.026395173 0.852272727 0.556144068 -24 -14 -19 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 15585646 15585651 - X_15585646_15585651_- 1 1 1 0 CG9220 FBtr0074064|FBtr0340347 15585287|15585287 15585993|15585993 X - 15585640 15585679 3'utr CG9220 FlyBase G67613.1 GGAACATTTATGGCGATTAAATGTAGTTACCAAAAATCAT 6 15585653 0.963419072 3 6 33 1 0.954242509 0.555555556 0.333333333 0.555555556 6 0 0 9 X:15585640-15585679 6 CG9220 FBtr0074064|FBtr0340347 15585287|15585287 15585993|15585993 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X - 15585598 15585716 3'utr CG9220 FlyBase G50883.1 ATGCTAAAAACAAATGAAATGTAAATAAGAGTAAAACGGAACATTTATGGCGATTAAATGTAGTTACCAAAAATCATTATTATGTATCTAATGATACATTGTTTTCTAACCAAAGTCGC 11 15585652 0.98168989 6 10 74 1 1.146128036 0.285714286 0.272727273 0.428571429 11 0 0 14 X:15585598-15585716 6 4 5417 FBgn0030662 132.6 4.106666667 6.293333333 0.030165913 0.974025974 0.63559322 2 1 1.5 0.01 dme-miR-318-3p 7mer-A1 CCAGTGA X 15585968 15585974 - X_15585968_15585974_- 0.823349562 0.823325903 0.823337732 1.68E-05 CG9220 FBtr0074064|FBtr0340347 15585287|15585287 15585993|15585993 X - 15585866 15586010 stop_codon CG9220 FlyBase G67615.1 AACAGCAGGCCAGGTGATGATCGATCCCATCCAGATCCAGTGATCCCCGCCAGCGCTCCTGCCACATAGTATTATGCTAAATGTTTCCTACATGCCAAAATAATTGGTAAGTCCCTGATGCTAAGCTAGCCCAACTAATGGTCCA 89 15585967 0.959876962 18 84 411 0.95049505 1.505149978 0.227722772 0.112359551 0.217821782 89 3 2 96 X:15585866-15586010 7 CG9220 FBtr0074064|FBtr0340347 15585287|15585287 15585993|15585993 CCAGTGA 7mer-A1 dme-miR-318-3p X - 15585877 15586007 stop_codon CG9220 FlyBase G50885.1 AGCAGGCCAGGTGATGATCGATCCCATCCAGATCCAGTGATCCCCGCCAGCGCTCCTGCCACATAGTATTATGCTAAATGTTTCCTACATGCCAAAATAATTGGTAAGTCCCTGATGCTAAGCTAGCCCAA 62 15585967 0.788274718 16 57 302 0.93877551 1.662757832 0.163265306 0.451612903 0.653061224 62 5 1 92 X:15585877-15586007 7 44.5 5418 FBgn0030662 132.6 4.106666667 6.293333333 0.335595777 10.83603896 7.070974576 -7 -7 -7 0.01 dme-miR-190-5p 6mer3-8 ACATAT X 15603610 15603615 - X_15603610_15603615_- 1 1 1 0 sog FBtr0340346 15603281 15605165 X - 15603570 15603611 3'utr sog FlyBase G67624.1 ATTTAATTCAATGGAGAGCTAAACAAACTTATACTAATAACT 22 15603600 0.716845191 6 17 112 0.814814815 1.041392685 0.111111111 0.227272727 0.37037037 22 4 1 22 X:15603570-15603611 2 sog FBtr0340346 15603281 15605165 ACATAT 6mer3-8 dme-miR-190-5p X - 15603555 15603610 3'utr sog FlyBase G50892.1 TTTAATTCAATGGAGAGCTAAACAAACTTATACTAATAACTTAAATTTAGTGTTTA 15 15603600 0.958919196 5 14 77 0.954545455 1.322219295 0 0.2 0.454545455 15 1 0 21 X:15603555-15603610 1 2 5419 FBgn0003463 399.53 8.35 12.89333333 0.005005882 0.239520958 0.155118925 -15 -15 -15 0.01 dme-miR-1012-3p 6mer3-8 TTGACT X 15604179 15604184 - X_15604179_15604184_- 1 1 1 0 sog FBtr0340346 15603281 15605165 X - 15604138 15604206 3'utr sog FlyBase G67625.1 GCAACCCGAAAGTTTCAACTGATTGACTGAATGGCAAAAATAAAATTAGCTTTAAATATGTTTTTCGCA 83 15604184 0.812253897 5 77 539 0.925233645 1.51851394 0.08411215 0.204819277 0.38317757 83 6 2 99 X:15604138-15604206 6 sog FBtr0340346 15603281 15605165 TTGACT 6mer3-8 dme-miR-1012-3p X - 15604135 15604207 3'utr sog FlyBase G50893.1 AGCAACCCGAAAGTTTCAACTGATTGACTGAATGGCAAAAATAAAATTAGCTTTAAATATGTTTTTCGCAAGC 71 15604185 0.971572704 6 69 455 0.957446809 1.477121255 0.095744681 0.253521127 0.436170213 71 2 2 90 X:15604135-15604207 6 58.5 5420 FBgn0003463 399.53 8.35 12.89333333 0.146422046 7.005988024 4.537228542 0 1 0.5 0.01 dme-miR-1012-3p 8mer-A1 TTGACTAA X 15701551 15701558 - X_15701551_15701558_- 0.626268045 0.626839219 0.626553632 0.000403899 Pis FBtr0074059|FBtr0074058 15701449|15701449 15703028|15702003 X - 15701447 15701639 3'utr Pis FlyBase G67628.1 ATGCCAATGCGTAAATGCAGGCCGATATACTATGAATGAGTGTCTATTTCCAGGATTTATCTCACTGTGCACGTTTTGGGTTTGACTAACCACCTTGTCCCAGCAACTCTCTCAATGTAACTAATGTATTTCTAATCGTAAGTTAAAGAATGTAATTGGAGACCTGCATGAAATATATACGACAAATGGATGT 35 15701584 0.984994109 23 33 264 0.947368421 1.255272505 0.184210526 0.057142857 0.131578947 35 1 1 36 X:15701447-15701639 8 Pis FBtr0074059|FBtr0074058 15701449|15701449 15703028|15702003 TTGACTAA 8mer-A1 dme-miR-1012-3p X - 15701469 15701602 3'utr Pis FlyBase G50894.1 GAGTGTCTATTTCCAGGATTTATCTCACTGTGCACGTTTTGGGTTTGACTAACCACCTTGTCCCAGCAACTCTCTCAATGTAACTAATGTATTTCTAATCGTAAGTTAAAGAATGTAATTGGAGACCTGCATGA 21 15701584 0.991412014 13 16 170 0.735294118 1.397940009 0.235294118 0.428571429 0.647058824 21 9 0 25 X:15701469-15701602 8 6 5421 FBgn0030670 380.6666667 33.08333333 50.32333333 0.015761821 0.181360202 0.119228986 26 26 26 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT X 15701695 15701700 - X_15701695_15701700_- 0.999999995 1 0.999999997 0 Pis FBtr0074059|FBtr0074058 15701449|15701449 15703028|15702003 X - 15701662 15701734 3'utr Pis FlyBase G67629.1 TGAATTGAAATTTAAGCGATTCGTTCCAGTCAGTAGCTGTTGCATATTTATTTTGCCTTTAGTTAGCGTAGTT 191 15701711 0.768592407 8 189 1334 0.991735537 2.380211242 0.144628099 0.219895288 0.384297521 191 2 0 240 X:15701662-15701734 6 Pis FBtr0074059|FBtr0074058 15701449|15701449 15703028|15702003 AGCTGT 6mer3-8 dme-miR-1008-3p X - 15701686 15701730 3'utr Pis FlyBase G50895.1 TTGAAATTTAAGCGATTCGTTCCAGTCAGTAGCTGTTGCATATTT 87 15701711 0.760534802 4 85 588 0.975409836 1.47348697 0.221311475 0.310344828 0.508196721 87 0 3 119 X:15701686-15701730 6 125.5 5422 FBgn0030670 380.6666667 33.08333333 50.32333333 0.329684764 3.793450882 2.493872955 11 11 11 0.01 dme-miR-92b-3p 6mer2-7 TGCAAT X 15701811 15701816 - X_15701811_15701816_- 1 1 1 0 Pis FBtr0074059|FBtr0074058 15701449|15701449 15703028|15702003 X - 15701740 15701945 3'utr Pis FlyBase G67630.1 AAATGAAACAACTCTTGATTCCAAGCTAAAAAAACAGAATTTTGAAGACGAATTGCGATCAGATGAAATATGGGCATTAGGCAACCAAATAGGCCGTAGTAGGAATTTAATTTATTTTTAATGCGCTATTGCAATGATTGTTGATTTTATTTGATATATTTTAGTTAGACGGGTGGTGAAATCACCCGACAATTTGTATTTAATAG 97 15701808 0.98313784 24 91 697 0.94017094 1.56427143 0.188034188 0.206185567 0.341880342 97 5 2 110 X:15701740-15701945 6 Pis FBtr0074059|FBtr0074058 15701449|15701449 15703028|15702003 TGCAAT 6mer2-7 dme-miR-92b-3p X - 15701781 15701828 3'utr Pis FlyBase G50896.1 TTAATGCGCTATTGCAATGATTGTTGATTTTATTTGATATATTTTAGT 30 15701807 0.690411725 11 29 334 0.978723404 1.662757832 0.404255319 0.4 0.617021277 30 1 0 46 X:15701781-15701828 6 27 5423 FBgn0030670 380.6666667 33.08333333 50.32333333 0.070928196 0.816120907 0.536530437 -8 -9 -8.5 0.01 dme-miR-1006-3p 6mer3-8 CGAATT X 15701892 15701897 - X_15701892_15701897_- 0.507200502 0.507200502 0.507200502 0 Pis FBtr0074059|FBtr0074058 15701449|15701449 15703028|15702003 X - 15701740 15701945 3'utr Pis FlyBase G67630.1 AAATGAAACAACTCTTGATTCCAAGCTAAAAAAACAGAATTTTGAAGACGAATTGCGATCAGATGAAATATGGGCATTAGGCAACCAAATAGGCCGTAGTAGGAATTTAATTTATTTTTAATGCGCTATTGCAATGATTGTTGATTTTATTTGATATATTTTAGTTAGACGGGTGGTGAAATCACCCGACAATTTGTATTTAATAG 97 15701875 0.98313784 24 91 697 0.94017094 1.56427143 0.188034188 0.206185567 0.341880342 97 5 2 110 X:15701740-15701945 6 Pis FBtr0074059|FBtr0074058 15701449|15701449 15703028|15702003 CGAATT 6mer3-8 dme-miR-1006-3p X - 15701837 15701989 3'utr Pis FlyBase G50897.1 CCGGGATCAATCTTCCAGCGACAGTTCTATCAACAGAAAGTACTAAATGAAACAACTCTTGATTCCAAGCTAAAAAAACAGAATTTTGAAGACGAATTGCGATCAGATGAAATATGGGCATTAGGCAACCAAATAGGCCGTAGTAGGAATTTA 41 15701893 0.953751315 16 41 183 1 1.812913357 0.276923077 0.414634146 0.630769231 41 0 0 65 X:15701837-15701989 6 14.5 5424 FBgn0030670 380.6666667 33.08333333 50.32333333 0.038091068 0.438287154 0.288136716 -22 -4 -13 0.01 dme-bantam-3p 7mer-m8 TGATCTC X 15702113 15702119 - X_15702113_15702119_- 0.661615243 0.661615243 0.661615243 0 Pis FBtr0074059 15701449 15703028 X - 15702053 15702137 3'utr Pis FlyBase G67632.1 TTGCCGTGCTCAAGGCCCTGATCTCGGTGATGCACGCCTACGTGGCGGGCATCGATCTGGCGGCCGTGGATGTACGCGAGCGGCA 46 15702110 0.970930719 7 42 238 0.918367347 1.051152522 0.244897959 0.043478261 0.102040816 46 1 3 45 X:15702053-15702137 7 Pis FBtr0074059 15701449 15703028 TGATCTC 7mer-m8 dme-bantam-3p X - 15702054 15702137 3'utr Pis FlyBase G50898.1 TTGCCGTGCTCAAGGCCCTGATCTCGGTGATGCACGCCTACGTGGCGGGCATCGATCTGGCGGCCGTGGATGTACGCGAGCGGC 20 15702110 0.967150286 6 18 98 0.9 1.431363764 0.166666667 0.4 0.6 20 3 0 27 X:15702054-15702137 7 29 5425 FBgn0030670 380.6666667 33.08333333 50.32333333 0.076182137 0.876574307 0.576273432 -9 -9 -9 0.01 dme-miR-34-5p 6mer2-7 ACTGCC X 15706216 15706221 - X_15706216_15706221_- 1 1 1 0 CG9281 FBtr0074056|FBtr0074057 15705804|15705804 15706932|15706932 X - 15706195 15706257 3'utr CG9281 FlyBase G67636.1 AGTAGTCGCAGCAAATTGTGTGAGAAACGATGTTAAACTGCCCTCCCAAATCGGAACCGTGAT 133 15706219 0.872496801 9 126 624 0.987421384 1.894869657 0.616352201 0.172932331 0.308176101 133 1 1 157 X:15706195-15706257 6 CG9281 FBtr0074057|FBtr0074056 15705804|15705804 15706932|15706932 ACTGCC 6mer2-7 dme-miR-34-5p X - 15706149 15706257 3'utr CG9281 FlyBase G50902.1 AGTAGTCGCAGCAAATTGTGTGAGAAACGATGTTAAACTGCCCTCCCAAATCGGAACCGTGATTTAGTTGCTCGCGGATTCGAACAAGACAATTAAATATTCTTCGATT 84 15706219 0.965607003 7 79 423 0.96 1.602059991 0.664 0.357142857 0.568 84 3 2 120 X:15706149-15706257 6 96.5 5426 FBgn0030672 2569.26 100.7833333 155.7866667 0.037559453 0.957499587 0.619436837 -2 -2 -2 0.01 dme-miR-252-5p 6mer3-8 GTACTT X 15706350 15706355 - X_15706350_15706355_- 1 1 1 0 CG9281 FBtr0074056|FBtr0074057 15705804|15705804 15706932|15706932 X - 15706322 15706375 3'utr CG9281 FlyBase G67637.1 ATATATAAAAAATGAAAAGTGTACTTTATTTTTTTGTAATTTATTTAAGCCTTA 8 15706356 0.992272309 3 8 89 1 0.954242509 0 0.125 0.222222222 8 0 0 9 X:15706322-15706375 6 CG9281 FBtr0074057|FBtr0074056 15705804|15705804 15706932|15706932 GTACTT 6mer3-8 dme-miR-252-5p X - 15706305 15706363 3'utr CG9281 FlyBase G50903.1 TGAAAAGTGTACTTTATTTTTTTGTAATTTATTTAAGCCTTAACTATATATTTAAAAAT 5 15706356 0.988524404 3 5 52 1 0.77815125 0 0.2 0.333333333 5 0 0 6 X:15706305-15706363 6 4.5 5427 FBgn0030672 2569.26 100.7833333 155.7866667 0.001751477 0.04465024 0.028885656 1 1 1 0.01 dme-miR-317-5p 6mer2-7 TATCCC X 15706800 15706805 - X_15706800_15706805_- 1 1 1 0 CG9281 FBtr0074056|FBtr0074057|FBtr0340308 15705804|15705804|15706444 15706932|15706932|15706932 X - 15706668 15706839 3'utr CG9281 FlyBase G67640.1 ACGCATCCCTCAACCGAAAGGACATTCAGACCGCTATCCCTTCTCTTCAATAGGCGGCGGGCGACATCCGGCTATTGGGCTGCCCGTTCGCTGCAATCCATTCTGTGCGAAATTAGTTTTGCGTTTACTCTACGCTATAGTGAAGTCACAATTCGATCGGCCAACCAGTAAA 52 15706796 0.980091997 17 48 341 0.928571429 1.414973348 0.375 0.076923077 0.142857143 52 3 1 52 X:15706668-15706839 6 CG9281 FBtr0074057|FBtr0340308|FBtr0074056 15705804|15706444|15705804 15706932|15706932|15706932 TATCCC 6mer2-7 dme-miR-317-5p X - 15706692 15706840 3'utr CG9281 FlyBase G50906.1 AACGCATCCCTCAACCGAAAGGACATTCAGACCGCTATCCCTTCTCTTCAATAGGCGGCGGGCGACATCCGGCTATTGGGCTGCCCGTTCGCTGCAATCCATTCTGTGCGAAATTAGTTTTGCGTTTACTCTACGCTATAGTGAAGTCA 37 15706796 0.977280477 14 35 226 0.963636364 1.72427587 0.2 0.378378378 0.581818182 37 2 0 53 X:15706692-15706840 6 20 5428 FBgn0030672 2569.26 100.7833333 155.7866667 0.007784343 0.19844551 0.128380692 -9 -9 -9 0.01 dme-miR-318-3p 6mer2-7 CCAGTG X 15706914 15706919 - X_15706914_15706919_- 1 1 1 0 CG9281 FBtr0074056|FBtr0074057|FBtr0340308 15705804|15705804|15706444 15706932|15706932|15706932 X - 15706881 15706929 3'utr CG9281 FlyBase G67641.1 TATCCCATATCCAGTGGATAGATAGCTGCCAACGGCCACACACTCGCAC 11 15706916 0.951827528 4 10 44 1 1.146128036 0 0.272727273 0.428571429 11 0 0 14 X:15706881-15706929 6 CG9281 FBtr0074057|FBtr0340308|FBtr0074056 15705804|15706444|15705804 15706932|15706932|15706932 CCAGTG 6mer2-7 dme-miR-318-3p X - 15706893 15706929 3'utr CG9281 FlyBase G50907.1 TATCCCATATCCAGTGGATAGATAGCTGCCAACGGCC 7 15706915 0.968875269 3 6 31 1 1.113943352 0 0.571428571 0.769230769 7 0 0 13 X:15706893-15706929 6 8 5429 FBgn0030672 2569.26 100.7833333 155.7866667 0.003113737 0.079378204 0.051352277 -3 -4 -3.5 0.01 dme-miR-8-3p 6mer3-8 CAGTAT X 15712115 15712120 + X_15712115_15712120_+ 1 1 1 0 CG15601 FBtr0074055|FBtr0339684|FBtr0339685|FBtr0339683 15712008|15712008|15712008|15712008 15712186|15712186|15712309|15712186 X + 15712083 15712137 3'utr CG15601 FlyBase G61595.1 TCCAGGGGATATTTATCAACCCGTTTGCCATTCAGTATATGTAGTCAAGCTAGTT 23 15712113 0.99188917 4 18 197 0.75 1.322219295 0.357142857 0.217391304 0.357142857 23 7 0 21 X:15712083-15712137 6 CG15601 FBtr0339683|FBtr0339685|FBtr0339684|FBtr0074055 15712008|15712008|15712008|15712008 15712186|15712309|15712186|15712186 CAGTAT 6mer3-8 dme-miR-8-3p X + 15712089 15712137 3'utr CG15601 FlyBase G46517.1 GGATATTTATCAACCCGTTTGCCATTCAGTATATGTAGTCAAGCTAGTT 16 15712113 0.988872975 4 14 135 0.884615385 1.361727836 0.346153846 0.375 0.615384615 16 3 0 23 X:15712089-15712137 6 16.5 5430 FBgn0030673 63.26333333 6.943333333 10.57666667 0.260814585 2.376380221 1.560037819 2 2 2 0.01 dme-miR-34-5p 6mer3-8 CACTGC X 15731315 15731320 + X_15731315_15731320_+ 1 1 1 0 CG8184 FBtr0339689|FBtr0340304|FBtr0339690|FBtr0339686|FBtr0074082|FBtr0339687|FBtr0339688 15731146|15731146|15731146|15731146|15731146|15731146|15731146 15731935|15731935|15731488|15731488|15731488|15731935|15731935 X + 15731263 15731388 3'utr CG8184 FlyBase G61660.1 GAGAAATGCATAATTGATTTGAATTGAACAGAACAGAAGAGAACAGAACAGCCACTGCAAATTTGCGATAGCGGCAACAGAAACTGCATACATAAACAGTACATATAGTTATATAGTATATATAAA 48 15731324 0.947418701 10 46 203 0.95 1.45484486 0.366666667 0.229166667 0.383333333 48 2 1 57 X:15731263-15731388 6 CG8184 FBtr0339687|FBtr0339688|FBtr0339686|FBtr0074082|FBtr0340304|FBtr0339690|FBtr0339689 15731146|15731146|15731146|15731146|15731146|15731146|15731146 15731935|15731935|15731488|15731488|15731935|15731488|15731935 CACTGC 6mer3-8 dme-miR-34-5p X + 15731263 15731386 3'utr CG8184 FlyBase G46559.1 GAGAAATGCATAATTGATTTGAATTGAACAGAACAGAAGAGAACAGAACAGCCACTGCAAATTTGCGATAGCGGCAACAGAAACTGCATACATAAACAGTACATATAGTTATATAGTATATATA 46 15731324 0.961977231 10 43 227 0.971428571 1.355387658 0.142857143 0.391304348 0.6 46 0 2 68 X:15731263-15731386 6 35 5431 FBgn0030674 2995.55 21.92666667 33.88666667 0.011683998 1.596229857 1.032854613 -9 -9 -9 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC X 15735660 15735666 + X_15735660_15735666_+ 0.661615645 0.661615073 0.661615359 3.54E-07 l(1)G0136 FBtr0074084|FBtr0332613 15735491|15735491 15735780|15735780 X + 15735647 15735758 3'utr l(1)G0136 FlyBase G61671.1 CTAAATATTAAGTTGTGTTCTATAGTTAAATTTTAGTTGTAGCGCTAGGTAAGTGACGCACCCGCTTCCTTGCCGCAGGCTGGCAGTTTGTCCTCTTTAGCCCTAGTTCAAT 17 15735659 0.991393947 9 17 186 1 1.255272505 0.055555556 0.058823529 0.111111111 17 0 0 18 X:15735647-15735758 7 l(1)G0136 FBtr0332613|FBtr0074084 15735491|15735491 15735780|15735780 TGTGTTC 7mer-m8 dme-miR-317-3p X + 15735649 15735701 3'utr l(1)G0136 FlyBase G46567.1 AAATATTAAGTTGTGTTCTATAGTTAAATTTTAGTTGTAGCGCTAGGTAAGTG 11 15735659 0.993122932 7 10 115 0.842105263 1.204119983 0.105263158 0.454545455 0.684210526 11 3 0 16 X:15735649-15735701 7 9 5432 FBgn0026666 97.33333333 15.83666667 24.21333333 0.092465753 0.56830141 0.371696035 1 1 1 0.01 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 15739983 15739990 + X_15739983_15739990_+ 0.63113665 0.63113665 0.63113665 0 CG8206 FBtr0074085|FBtr0346187 15739977|15739977 15740242|15740417 X + 15739950 15740005 stop_codon CG8206 FlyBase G61673.1 AGGTGAACGAGCGCGGCGAGCTGATTTAGGAACTCTAGTCAAAGGGGCATCAGTAG 58 15739983 0.955775943 7 50 233 0.848484848 1.271066772 0.348484848 0.120689655 0.227272727 58 8 2 56 X:15739950-15740005 8 CG8206 FBtr0074085|FBtr0346187 15739977|15739977 15740242|15740417 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X + 15739930 15740002 stop_codon CG8206 FlyBase G46570.1 TGCCCGCGTCCGGGTGATCAAGGTGAACGAGCGCGGCGAGCTGATTTAGGAACTCTAGTCAAAGGGGCATCAG 21 15739975 0.93865554 7 21 79 1 1.544068044 0.228571429 0.428571429 0.657142857 21 0 0 35 X:15739930-15740002 8 28.5 5433 FBgn0030679 236.6666667 29.25666667 45.08666667 0.120422535 0.974136949 0.632115925 0 8 4 0.01 dme-miR-2535b-3p 8mer-m1 CCGTGAGT X 15740193 15740200 + X_15740193_15740200_+ 0.610132723 0.610132723 0.610132723 0 CG8206 FBtr0074085|FBtr0346187 15739977|15739977 15740242|15740417 X + 15740189 15740234 3'utr CG8206 FlyBase G61676.1 CGGGCCGTGAGTAATGCCTAAAAAAGTGATTAAAGGAACGACCAGT 23 15740219 0.94515256 4 23 97 1 1.380211242 0.333333333 0.043478261 0.083333333 23 0 0 24 X:15740189-15740234 8 CG8206 FBtr0074085|FBtr0346187 15739977|15739977 15740242|15740417 CCGTGAGT 8mer-m1 dme-miR-2535b-3p X + 15740166 15740229 3'utr CG8206 FlyBase G46571.1 TGTACTGTAATTGTTGATTGTTTCGGGCCGTGAGTAATGCCTAAAAAAGTGATTAAAGGAACGA 22 15740219 0.961136964 5 20 95 0.944444444 1.054357662 0.277777778 0.5 0.694444444 22 0 2 34 X:15740166-15740229 8 6.5 5434 FBgn0030679 236.6666667 29.25666667 45.08666667 0.027464789 0.222171585 0.14416679 -26 -26 -26 0.01 dme-miR-304-5p 7mer-m8 TGAGATT X 15741420 15741426 - X_15741420_15741426_- 0.620203442 0.620203442 0.620203442 0 CG8944 FBtr0074201 15741341 15743214 X - 15741403 15741453 3'utr CG8944 FlyBase G67665.1 AATTTTATTTATCTTAGTAATACCGAATGAGATTTTAGTACCATACAATAT 50 15741426 0.877165987 4 49 390 0.983050847 1.763427994 0.169491525 0.14 0.271186441 50 1 0 58 X:15741403-15741453 7 CG8944 FBtr0074201 15741341 15743214 TGAGATT 7mer-m8 dme-miR-304-5p X - 15741407 15741447 3'utr CG8944 FlyBase G50924.1 ATTTATCTTAGTAATACCGAATGAGATTTTAGTACCATACA 23 15741426 0.853096921 4 22 173 1 1.62324929 0.023809524 0.608695652 0.785714286 23 0 0 42 X:15741407-15741447 7 35.5 5435 FBgn0030680 574.6266667 15.99666667 24.55666667 0.061779242 2.219212336 1.445635944 0 0 0 0.01 dme-miR-999-3p 8mer-A1 AGTTAACA X 15741730 15741737 - X_15741730_15741737_- 0.643926235 0.643926235 0.643926235 0 CG8944 FBtr0074201 15741341 15743214 X - 15741726 15741757 3'utr CG8944 FlyBase G67667.1 ATTCAAACAAATTGTGAAATAGTTAACAGAAG 6 15741746 0.790505627 2 6 34 1 0.903089987 0 0.333333333 0.5 6 0 0 8 X:15741726-15741757 8 CG8944 FBtr0074201 15741341 15743214 AGTTAACA 8mer-A1 dme-miR-999-3p X - 15741725 15741765 3'utr CG8944 FlyBase G50926.1 GGGCGAGCATTCAAACAAATTGTGAAATAGTTAACAGAAGC 7 15741746 0.827114046 2 6 32 1 1 0.2 0.285714286 0.5 7 0 0 10 X:15741725-15741765 8 5.5 5436 FBgn0030680 574.6266667 15.99666667 24.55666667 0.009571432 0.34382163 0.223971766 9 9 9 0.01 dme-miR-12-5p 6mer3-8 AATACT X 15742124 15742129 - X_15742124_15742129_- 1 1 1 0 CG8944 FBtr0074201 15741341 15743214 X - 15742112 15742157 3'utr CG8944 FlyBase G67669.1 CGCACTGTCCGCGAACGACTGAATCTGTAATACTACACTTCGAGGC 7 15742133 0.923782831 4 6 22 1 0.84509804 0.285714286 0 0 7 0 0 7 X:15742112-15742157 6 CG8944 FBtr0074201 15741341 15743214 AATACT 6mer3-8 dme-miR-12-5p X - 15742114 15742162 3'utr CG8944 FlyBase G50928.1 CGAAACGCACTGTCCGCGAACGACTGAATCTGTAATACTACACTTCGAG 6 15742134 0.956980478 4 5 23 1 1 0 0.5 0.7 6 0 0 10 X:15742114-15742162 6 2.5 5437 FBgn0030680 574.6266667 15.99666667 24.55666667 0.004350651 0.156282559 0.101805348 4 5 4.5 0.01 dme-miR-305-3p 6mer3-8 ATGTGC X 15742210 15742215 - X_15742210_15742215_- 1 1 1 0 CG8944 FBtr0074201 15741341 15743214 X - 15742184 15742217 3'utr CG8944 FlyBase G67670.1 TAATGTGCAGGACGTTGCGTGGCCATTGACGCAT 9 15742214 0.912502726 2 9 53 1 1 0 0.111111111 0.2 9 0 0 10 X:15742184-15742217 6 CG8944 FBtr0074201 15741341 15743214 ATGTGC 6mer3-8 dme-miR-305-3p X - 15742182 15742218 3'utr CG8944 FlyBase G50929.1 ATAATGTGCAGGACGTTGCGTGGCCATTGACGCATTG 8 15742212 0.854036745 4 8 57 1 1.176091259 0 0.625 0.8 8 0 0 15 X:15742182-15742218 6 8.5 5438 FBgn0030680 574.6266667 15.99666667 24.55666667 0.014792213 0.5313607 0.346138184 -1 -3 -2 0.01 dme-miR-263a-5p 6mer2-7 TGCCAT X 15742350 15742355 - X_15742350_15742355_- 1 1 1 0 CG8944 FBtr0074201 15741341 15743214 X - 15742328 15742388 3'utr CG8944 FlyBase G67671.1 TTATACGCAAGAACCACAACTGCAGCAGCCAATTGCCATCAAACTGATAGACCGAACCGAA 53 15742368 0.928327384 5 50 112 0.921875 1.770852012 0.046875 0.150943396 0.296875 53 5 0 59 X:15742328-15742388 6 CG8944 FBtr0074201 15741341 15743214 TGCCAT 6mer2-7 dme-miR-263a-5p X - 15742324 15742389 3'utr CG8944 FlyBase G50930.1 TTTATACGCAAGAACCACAACTGCAGCAGCCAATTGCCATCAAACTGATAGACCGAACCGAAAACC 37 15742368 0.911566508 4 33 65 0.891304348 1.612783857 0.130434783 0.162162162 0.326086957 37 5 0 41 X:15742324-15742389 6 23.5 5439 FBgn0030680 574.6266667 15.99666667 24.55666667 0.040896118 1.469056053 0.956970273 13 13 13 0.01 dme-miR-184-3p 6mer2-7 CCGTCC X 15742467 15742472 - X_15742467_15742472_- 1 1 1 0 CG8944 FBtr0074201 15741341 15743214 X - 15742396 15742538 3'utr CG8944 FlyBase G67672.1 TCTTCTCTCCAGACACACACAGCATTACAATCTGATTATTGATGTAAGAATTGTATACATTCCTTCCCGTCCCGCGATAATCGATGTGAGCGAGTAGATGCATTCCAGAACTAAGTATTTCATAAAGTATTCTATGTACTAAC 57 15742476 0.977225945 12 56 368 0.985714286 1.838849091 0.085714286 0.210526316 0.357142857 57 1 0 69 X:15742396-15742538 6 CG8944 FBtr0074201 15741341 15743214 CCGTCC 6mer2-7 dme-miR-184-3p X - 15742392 15742520 3'utr CG8944 FlyBase G50931.1 ACAGCATTACAATCTGATTATTGATGTAAGAATTGTATACATTCCTTCCCGTCCCGCGATAATCGATGTGAGCGAGTAGATGCATTCCAGAACTAAGTATTTCATAAAGTATTCTATGTACTAACTATA 46 15742475 0.977517176 12 42 283 0.940298507 1.498310554 0.28358209 0.260869565 0.492537313 46 3 1 63 X:15742392-15742520 6 37 5440 FBgn0030680 574.6266667 15.99666667 24.55666667 0.064389633 2.312981871 1.506719153 4 3 3.5 0.01 dme-miR-33-5p 7mer-A1 AATGCAA X 15742708 15742714 - X_15742708_15742714_- 0.782911824 0.782911824 0.782911824 0 CG8944 FBtr0074201 15741341 15743214 X - 15742669 15742780 3'utr CG8944 FlyBase G67673.1 TCTATTCGAATCCACTTACCTGTAGACGTACTTAAACACAAAAAGTATTTAACAACAACGCCCATGAATGCAACTTTAGTTCTAAGAAATTGGTAGAACACTTACACTTCCT 138 15742716 0.961568986 15 124 764 0.896969697 1.392110465 0.066666667 0.173913043 0.309090909 138 12 5 148 X:15742669-15742780 7 CG8944 FBtr0074201 15741341 15743214 AATGCAA 7mer-A1 dme-miR-33-5p X - 15742661 15742737 3'utr CG8944 FlyBase G50932.1 AGTATTTAACAACAACGCCCATGAATGCAACTTTAGTTCTAAGAAATTGGTAGAACACTTACACTTCCTTTGACTTC 50 15742716 0.97091796 7 45 263 0.9 1.799340549 0 0.34 0.528571429 50 7 0 63 X:15742661-15742737 7 69.5 5441 FBgn0030680 574.6266667 15.99666667 24.55666667 0.120948094 4.344655136 2.830188679 2 2 2 0.01 dme-miR-79-3p 7mer-m8 TAGCTTT X 15743029 15743035 - X_15743029_15743035_- 0.620204031 0.620204031 0.620204031 0 CG8944 FBtr0074201 15741341 15743214 X - 15742979 15743101 3'utr CG8944 FlyBase G67675.1 ACTAAAATTGAAACTGTAACTGCAACTGTAACATCTTTAAATTGCCAGCTACTTAGGCAACTTAGTTAGCTTTCTTAATCTTAGTTTTAGATTCACTCGATGTTCAGATCTATTTTGCAATTT 38 15743036 0.98396837 16 38 331 1 1.681241237 0.145833333 0.236842105 0.395833333 38 0 0 48 X:15742979-15743101 7 CG8944 FBtr0074201 15741341 15743214 TAGCTTT 7mer-m8 dme-miR-79-3p X - 15743014 15743103 3'utr CG8944 FlyBase G50936.2 TAACTAAAATTGAAACTGTAACTGCAACTGTAACATCTTTAAATTGCCAGCTACTTAGGCAACTTAGTTAGCTTTCTTAATCTTAGTTTT 26 15743036 0.986012817 7 23 201 0.955555556 1.633468456 0.088888889 0.423076923 0.666666667 26 2 0 43 X:15743014-15743103 7 15.5 5442 FBgn0030680 574.6266667 15.99666667 24.55666667 0.026974035 0.968951865 0.631193159 1 1 1 0.01 dme-miR-932-5p 6mer2-7 GAATTG X 15750955 15750960 + X_15750955_15750960_+ 1 1 1 0 CG8239 FBtr0074087|FBtr0346188 15750934|15750934 15751220|15751737 X + 15750893 15750983 stop_codon CG8239 FlyBase G61692.1 CGCTGATAATAGTTTATTGATAAATGGACTTCCGCTGAAGTGATGAGAGTGATTTTGAGAGTGAATTGCATAGGGAAAGGCACAGAAATTC 44 15750947 0.85896331 12 41 316 0.93877551 1.361727836 0.489795918 0.113636364 0.204081633 44 2 1 46 X:15750893-15750983 6 CG8239 FBtr0346188 15750934 15751737 GAATTG 6mer2-7 dme-miR-932-5p X + 15750916 15750961 stop_codon CG8239 FlyBase G46587.1 ATGGACTTCCGCTGAAGTGATGAGAGTGATTTTGAGAGTGAATTGC 11 15750947 0.690770944 6 9 70 0.875 1.146128036 0.875 0.4 0.625 10 2 0 14 X:15750916-15750961 6 13.5 5443 FBgn0030683 250.2766667 19.80666667 30.47 0.053940306 0.681588691 0.443058746 8 8 8 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 15751631 15751637 + X_15751631_15751637_+ 0.801970437 0.801970432 0.801970435 0 CG8239 FBtr0346188|FBtr0346188|FBtr0346188 15750934|15750934|15750934 15751737|15751737|15751737 X + 15751612 15751654 3'utr CG8239 FlyBase G61696.1 TTTAGGTTTGCGACCAACTTGTGATAAAAAAAAACCGCCCAAA 17 15751630 0.967457038 3 16 89 0.95 0.977723605 0.1 0.176470588 0.3 17 0 1 19 X:15751612-15751654 7 CG8239 FBtr0346188|FBtr0346188|FBtr0346188 15750934|15750934|15750934 15751737|15751737|15751737 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X + 15751612 15751651 3'utr CG8239 FlyBase G46588.1 TTTAGGTTTGCGACCAACTTGTGATAAAAAAAAACCGCCC 13 15751630 0.977635094 3 11 76 0.913043478 1.021189299 0 0.384615385 0.652173913 13 1 1 21 X:15751612-15751651 7 15 5444 FBgn0030683 250.2766667 19.80666667 30.47 0.059933673 0.757320767 0.492287496 1 1 1 0.01 dme-miR-252-5p 7mer-m8 GTACTTA X 15751984 15751990 - X_15751984_15751990_- 0.588299917 0.588299917 0.588299917 0 Graf FBtr0074198|FBtr0340306|FBtr0074194|FBtr0345133|FBtr0340305|FBtr0340307|FBtr0074197 15751672|15751672|15751672|15751672|15751672|15751672|15751672 15752232|15752232|15752232|15752232|15752232|15752232|15752232 X - 15751922 15752019 3'utr Graf FlyBase G67686.2 TAACCTTTATAATACCATGACCATACAATGTACTTATTTTTAATTATTTAATAAGGAGTATAAACTCAGTGCAACTGCAAAGATTTATTTACTAATTG 49 15751991 0.953992865 9 46 455 0.983333333 1.770852012 0.116666667 0.224489796 0.366666667 49 1 0 59 X:15751922-15752019 7 Graf FBtr0340305|FBtr0340307|FBtr0074197|FBtr0074198|FBtr0340306|FBtr0074194|FBtr0345133 15751672|15751672|15751672|15751672|15751672|15751672|15751672 15752232|15752232|15752232|15752232|15752232|15752232|15752232 GTACTTA 7mer-m8 dme-miR-252-5p X - 15751924 15752015 3'utr Graf FlyBase G50941.3 CTTTATAATACCATGACCATACAATGTACTTATTTTTAATTATTTAATAAGGAGTATAAACTCAGTGCAACTGCAAAGATTTATTTACTAAT 31 15751991 0.871099308 7 26 269 0.86 1.156347201 0 0.451612903 0.66 31 5 2 43 X:15751924-15752015 7 27 5445 FBgn0030685 2113.673333 59.81666667 91.46666667 0.01277397 0.451379214 0.295189504 1 1 1 0.01 dme-miR-308-3p 7mer-m1 TGTGATT X 15793951 15793957 - X_15793951_15793957_- 0.521223855 0.521223855 0.521223855 0 CG8974 FBtr0074186|FBtr0074187|FBtr0074189|FBtr0074185|FBtr0074188 15793719|15793719|15793719|15793719|15793719 15794100|15794100|15794100|15794100|15794100 X - 15793916 15793976 3'utr CG8974 FlyBase G67727.1 GTTGGGCAATAGTCGTTGGTGTGATTAATTAACATAAATTGTTAGCATTCGGTTATAATTG 24 15793950 0.990269412 8 22 223 0.896551724 1.414973348 0.344827586 0.208333333 0.344827586 24 3 0 26 X:15793916-15793976 7 CG8974 FBtr0074185|FBtr0074188|FBtr0074187|FBtr0074189|FBtr0074186 15793719|15793719|15793719|15793719|15793719 15794100|15794100|15794100|15794100|15794100 TGTGATT 7mer-m1 dme-miR-308-3p X - 15793916 15793986 3'utr CG8974 FlyBase G50962.1 TCTTAAACTCGTTGGGCAATAGTCGTTGGTGTGATTAATTAACATAAATTGTTAGCATTCGGTTATAATTG 23 15793950 0.9882527 6 22 199 1 1.51851394 0.272727273 0.260869565 0.484848485 23 0 0 33 X:15793916-15793986 7 19 5446 FBgn0030693 519 47.39666667 72.25333333 0.036608863 0.400872073 0.262963646 -7 -7 -7 0.01 dme-miR-308-3p 7mer-m1 TGTGATT X 15797138 15797144 - X_15797138_15797144_- 0.521223855 0.521223855 0.521223855 0 CG32581 FBtr0113439|FBtr0074184 15796906|15796906 15797252|15797252 X - 15797103 15797155 3'utr CG32581 FlyBase G67735.1 ATAGTCGTTGGTGTGATTAATTAACATAAATTGTTAGCATTCGGTTATAATTG 8 15797137 0.986915946 5 8 75 1 1 0.2 0.25 0.4 8 0 0 10 X:15797103-15797155 7 CG32581 FBtr0074184|FBtr0113439 15796906|15796906 15797252|15797252 TGTGATT 7mer-m1 dme-miR-308-3p X - 15797123 15797154 3'utr CG32581 FlyBase G50969.1 TAGTCGTTGGTGTGATTAATTAACATAAATTG 9 15797136 0.74042703 3 9 75 1 1.113943352 0.076923077 0.222222222 0.461538462 9 0 0 13 X:15797123-15797154 7 8 5447 FBgn0052581 0 0 0 Inf Inf Inf -7 -8 -7.5 0.01 dme-miR-932-5p 6mer2-7 GAATTG X 15824574 15824579 + X_15824574_15824579_+ 1 1 1 0 sd FBtr0112826|FBtr0074101|FBtr0308134|FBtr0310311|FBtr0074100|FBtr0346799|FBtr0308133|FBtr0308130|FBtr0308129|FBtr0112824|FBtr0112825|FBtr0112827|FBtr0074099|FBtr0308128|FBtr0340115|FBtr0310312|FBtr0310313|FBtr0308131|FBtr0308132|FBtr0301543|FBtr0301544 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15825722|15825722|15825722|15825722|15825722|15827682|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825495|15825495|15827681|15826608|15825722|15825722 X + 15824551 15824605 3'utr sd FlyBase G61750.1 AATAGTATCATCAATACGGCTAAGAATTGCGATAATAAGACGAGTAATGAAATTG 19 15824577 0.802784441 4 12 93 0.681818182 0.698970004 0.136363636 0.105263158 0.227272727 19 5 2 15 X:15824551-15824605 6 sd FBtr0346799|FBtr0310313|FBtr0301543|FBtr0308130|FBtr0308132|FBtr0074101|FBtr0308129|FBtr0112824|FBtr0310311|FBtr0074099|FBtr0308128|FBtr0308131|FBtr0074100|FBtr0301544|FBtr0308133|FBtr0112825|FBtr0112827|FBtr0112826|FBtr0340115|FBtr0310312|FBtr0308134 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15827682|15825495|15825722|15825722|15826608|15825722|15825722|15825722|15825722|15825722|15825722|15827681|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825495|15825722 GAATTG 6mer2-7 dme-miR-932-5p X + 15824566 15824610 3'utr sd FlyBase G46625.1 ACGGCTAAGAATTGCGATAATAAGACGAGTAATGAAATTGCCAAC 14 15824577 0.95915564 4 11 64 0.818181818 0.653212514 0.045454545 0.5 0.681818182 14 1 3 18 X:15824566-15824610 6 13 5448 FBgn0003345 3188.213333 125.3966667 192.3633333 0.004077519 0.103671017 0.067580447 -3 -3 -3 0.01 dme-miR-986-5p 7mer-m8 ATTCGAG X 15825048 15825054 + X_15825048_15825054_+ 0.671420434 0.670793831 0.671107132 0.000443073 sd FBtr0112826|FBtr0074101|FBtr0308134|FBtr0310311|FBtr0074100|FBtr0346799|FBtr0308133|FBtr0308130|FBtr0308129|FBtr0112824|FBtr0112825|FBtr0112827|FBtr0074099|FBtr0308128|FBtr0340115|FBtr0310312|FBtr0310313|FBtr0308131|FBtr0308132|FBtr0301543|FBtr0301544 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15825722|15825722|15825722|15825722|15825722|15827682|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825495|15825495|15827681|15826608|15825722|15825722 X + 15825032 15825073 3'utr sd FlyBase G61753.1 ACAAGCAACCACAACCATTCGAGGCTGAGCAACACGAACACG 42 15825049 0.803691446 2 41 83 0.980392157 1.698970004 0.156862745 0.214285714 0.352941176 42 1 0 50 X:15825032-15825073 7 sd FBtr0346799|FBtr0310313|FBtr0301543|FBtr0308130|FBtr0308132|FBtr0074101|FBtr0308129|FBtr0112824|FBtr0310311|FBtr0074099|FBtr0308128|FBtr0308131|FBtr0074100|FBtr0301544|FBtr0308133|FBtr0112825|FBtr0112827|FBtr0112826|FBtr0340115|FBtr0310312|FBtr0308134 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15827682|15825495|15825722|15825722|15826608|15825722|15825722|15825722|15825722|15825722|15825722|15827681|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825495|15825722 ATTCGAG 7mer-m8 dme-miR-986-5p X + 15825034 15825064 3'utr sd FlyBase G46627.1 AAGCAACCACAACCATTCGAGGCTGAGCAAC 19 15825050 0.822868326 2 18 39 0.891891892 1.51851394 0.081081081 0.684210526 0.837837838 19 4 0 33 X:15825034-15825064 7 30.5 5449 FBgn0003345 3188.213333 125.3966667 192.3633333 0.009566487 0.243228156 0.158554125 -1 -2 -1.5 0.01 dme-miR-276a-3p 7mer-m8 AGTTCCT X 15825152 15825158 + X_15825152_15825158_+ 0.631524616 0.631524679 0.631524648 7.07E-08 sd FBtr0112826|FBtr0074101|FBtr0308134|FBtr0310311|FBtr0074100|FBtr0346799|FBtr0308133|FBtr0308130|FBtr0308129|FBtr0112824|FBtr0112825|FBtr0112827|FBtr0074099|FBtr0308128|FBtr0340115|FBtr0310312|FBtr0310313|FBtr0308131|FBtr0308132|FBtr0301543|FBtr0301544 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15825722|15825722|15825722|15825722|15825722|15827682|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825495|15825495|15827681|15826608|15825722|15825722 X + 15825150 15825259 3'utr sd FlyBase G61755.1 GCAGTTCCTGAAGTTGTCCGCTCATGAATATTCAGAAACTGACAGACGCTCCGCGGCTGCTCTAAATCTCAGCAGTATTGGCGAAAAAGAAGCGGCATTGGTCGGTGAAT 20 15825175 0.956709627 7 19 108 0.96 1.079181246 0.28 0.15 0.32 20 0 1 24 X:15825150-15825259 7 sd FBtr0346799|FBtr0310313|FBtr0301543|FBtr0308130|FBtr0308132|FBtr0074101|FBtr0308129|FBtr0112824|FBtr0310311|FBtr0074099|FBtr0308128|FBtr0308131|FBtr0074100|FBtr0301544|FBtr0308133|FBtr0112825|FBtr0112827|FBtr0112826|FBtr0340115|FBtr0310312|FBtr0308134 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15827682|15825495|15825722|15825722|15826608|15825722|15825722|15825722|15825722|15825722|15825722|15827681|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825495|15825722 AGTTCCT 7mer-m8 dme-miR-276a-3p X + 15825141 15825246 3'utr sd FlyBase G46628.1 GGGCTATGAGCAGTTCCTGAAGTTGTCCGCTCATGAATATTCAGAAACTGACAGACGCTCCGCGGCTGCTCTAAATCTCAGCAGTATTGGCGAAAAAGAAGCGGCA 20 15825174 0.968738729 9 17 95 0.923076923 1.380211242 0.307692308 0.3 0.461538462 20 2 0 24 X:15825141-15825246 7 5.5 5450 FBgn0003345 3188.213333 125.3966667 192.3633333 0.001725104 0.043860815 0.028591727 -23 -22 -22.5 0.01 dme-miR-282-5p 6mer2-7 GAGGCT X 15825420 15825425 + X_15825420_15825425_+ 1 1 1 0 sd FBtr0112826|FBtr0074101|FBtr0308134|FBtr0310311|FBtr0074100|FBtr0346799|FBtr0308133|FBtr0308130|FBtr0308129|FBtr0112824|FBtr0112825|FBtr0112827|FBtr0074099|FBtr0308128|FBtr0340115|FBtr0310312|FBtr0310313|FBtr0308131|FBtr0308132|FBtr0301543|FBtr0301544 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15825722|15825722|15825722|15825722|15825722|15827682|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825495|15825495|15827681|15826608|15825722|15825722 X + 15825338 15825503 3'utr sd FlyBase G61756.1 GAGGACCCAACGCCGATGGAATCAGTAACAAAGGCCGTGAGCCGTGAGCGCCATATAATACCACCAGCCTTTAAGCAAGGTTGAGGCTTATTTTAAGGGTTAGAAATACGATTGCAAGGAACGACACAATCAGAGCTTTTTGTTTTCCACCCAAAACGAGAAAGAA 80 15825419 0.970365173 18 76 435 0.957894737 1.959041392 0.084210526 0.1625 0.294736842 80 4 0 91 X:15825338-15825503 6 sd FBtr0346799|FBtr0310313|FBtr0301543|FBtr0308130|FBtr0308132|FBtr0074101|FBtr0308129|FBtr0112824|FBtr0310311|FBtr0074099|FBtr0308128|FBtr0308131|FBtr0074100|FBtr0301544|FBtr0308133|FBtr0112825|FBtr0112827|FBtr0112826|FBtr0340115|FBtr0310312|FBtr0308134 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15827682|15825495|15825722|15825722|15826608|15825722|15825722|15825722|15825722|15825722|15825722|15827681|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825495|15825722 GAGGCT 6mer2-7 dme-miR-282-5p X + 15825346 15825479 3'utr sd FlyBase G46629.1 AACGCCGATGGAATCAGTAACAAAGGCCGTGAGCCGTGAGCGCCATATAATACCACCAGCCTTTAAGCAAGGTTGAGGCTTATTTTAAGGGTTAGAAATACGATTGCAAGGAACGACACAATCAGAGCTTTTTG 29 15825419 0.95973905 10 28 139 1 1.643452676 0.204545455 0.448275862 0.636363636 29 0 0 44 X:15825346-15825479 6 20.5 5451 FBgn0003345 3188.213333 125.3966667 192.3633333 0.006429934 0.16348122 0.106569166 1 1 1 0.01 dme-miR-980-5p 6mer2-7 AAAAAC X 15825517 15825522 + X_15825517_15825522_+ 0.991381595 1 0.995690797 0.006094129 sd FBtr0112826|FBtr0074101|FBtr0308134|FBtr0310311|FBtr0074100|FBtr0346799|FBtr0308133|FBtr0308130|FBtr0308129|FBtr0112824|FBtr0112825|FBtr0112827|FBtr0074099|FBtr0308128|FBtr0340115|FBtr0308131|FBtr0308132|FBtr0301543|FBtr0301544 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15825722|15825722|15825722|15825722|15825722|15827682|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15827681|15826608|15825722|15825722 X + 15825515 15825616 3'utr sd FlyBase G61757.1 AAAAAAACCACATGGCAGGGGACAATGGAAGAGCCTCAAAACAAGAGATGATTGATTGGTGTTCAGTATCGAAATCAGATTTTTATTTGTGCAAAATAAAAA 36 15825540 0.94907559 15 33 206 0.928571429 1.591064607 0.166666667 0.111111111 0.238095238 36 3 0 39 X:15825515-15825616 6 sd FBtr0346799|FBtr0301543|FBtr0308130|FBtr0308132|FBtr0074101|FBtr0308129|FBtr0112824|FBtr0310311|FBtr0074099|FBtr0308128|FBtr0308131|FBtr0074100|FBtr0301544|FBtr0308133|FBtr0112825|FBtr0112827|FBtr0112826|FBtr0340115|FBtr0308134 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15827682|15825722|15825722|15826608|15825722|15825722|15825722|15825722|15825722|15825722|15827681|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722 AAAAAC 6mer2-7 dme-miR-980-5p X + 15825516 15825544 3'utr sd FlyBase G46630.1 AAAAAACCACATGGCAGGGGACAATGGAA 5 15825527 0.706656381 2 5 3 1 0.903089987 0 0.2 0.5 5 0 0 8 X:15825516-15825544 6 5.5 5452 FBgn0003345 3188.213333 125.3966667 192.3633333 0.001725104 0.043860815 0.028591727 -23 -10 -16.5 0.01 dme-miR-317-3p 7mer-A1 GTGTTCA X 15825573 15825579 + X_15825573_15825579_+ 0.823349562 0.823349562 0.823349562 0 sd FBtr0112826|FBtr0074101|FBtr0308134|FBtr0310311|FBtr0074100|FBtr0346799|FBtr0308133|FBtr0308130|FBtr0308129|FBtr0112824|FBtr0112825|FBtr0112827|FBtr0074099|FBtr0308128|FBtr0340115|FBtr0308131|FBtr0308132|FBtr0301543|FBtr0301544 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15825722|15825722|15825722|15825722|15825722|15827682|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15827681|15826608|15825722|15825722 X + 15825515 15825616 3'utr sd FlyBase G61757.1 AAAAAAACCACATGGCAGGGGACAATGGAAGAGCCTCAAAACAAGAGATGATTGATTGGTGTTCAGTATCGAAATCAGATTTTTATTTGTGCAAAATAAAAA 36 15825568 0.94907559 15 33 206 0.928571429 1.591064607 0.166666667 0.111111111 0.238095238 36 3 0 39 X:15825515-15825616 7 sd FBtr0346799|FBtr0301543|FBtr0308130|FBtr0308132|FBtr0074101|FBtr0308129|FBtr0112824|FBtr0310311|FBtr0074099|FBtr0308128|FBtr0308131|FBtr0074100|FBtr0301544|FBtr0308133|FBtr0112825|FBtr0112827|FBtr0112826|FBtr0340115|FBtr0308134 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15827682|15825722|15825722|15826608|15825722|15825722|15825722|15825722|15825722|15825722|15827681|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722 GTGTTCA 7mer-A1 dme-miR-317-3p X + 15825557 15825613 3'utr sd FlyBase G46631.1 AAGAGATGATTGATTGGTGTTCAGTATCGAAATCAGATTTTTATTTGTGCAAAATAA 7 15825573 0.982724955 4 7 57 1 0.954242509 0.222222222 0.285714286 0.444444444 7 0 0 9 X:15825557-15825613 7 10 5453 FBgn0003345 3188.213333 125.3966667 192.3633333 0.003136553 0.079746936 0.051984959 5 0 2.5 0.01 dme-bantam-3p 8mer-A1 TGATCTCA X 15825755 15825762 + X_15825755_15825762_+ 0.631136385 0.631136385 0.631136385 0 sd FBtr0346799|FBtr0308131|FBtr0308132 15824447|15824447|15824447 15827682|15827681|15826608 X + 15825728 15825784 3'utr sd FlyBase G61759.1 AAAAACAAAAAAAAAAATACATTTAAATGATCTCAAAGTTACTTAAAACATATTTTT 691 15825754 0.966940761 12 668 4799 0.97260274 2.152288344 0.180365297 0.218523878 0.383561644 691 19 5 852 X:15825728-15825784 8 sd FBtr0346799|FBtr0308132|FBtr0308131 15824447|15824447|15824447 15827682|15826608|15827681 TGATCTCA 8mer-A1 dme-bantam-3p X + 15825730 15825801 3'utr sd FlyBase G46633.1 AAACAAAAAAAAAAATACATTTAAATGATCTCAAAGTTACTTAAAACATATTTTTTGTGTATAATTTTTTTT 588 15825754 0.981386736 13 561 4084 0.957972806 1.986211716 0.196538937 0.294217687 0.487021014 588 27 7 775 X:15825730-15825801 8 637.5 5454 FBgn0003345 3188.213333 125.3966667 192.3633333 0.199955252 5.083867195 3.314041137 1 1 1 0.01 dme-miR-305-3p 6mer3-8 ATGTGC X 15825995 15826000 + X_15825995_15826000_+ 0.998848291 0.993948177 0.996398234 0.003464894 sd FBtr0346799|FBtr0308131|FBtr0308132 15824447|15824447|15824447 15827682|15827681|15826608 X + 15825896 15826015 3'utr sd FlyBase G61760.1 AAGAGTATATATATTGAATAATATGTTTGAAACAAAGAACGCCGCAAAAGAAACAGATACAATATAGTTTTCCGAATTACCATTTAGATATGCATGGTCATGTGCAAATAGGATTAAGCC 14 15825979 0.983070797 9 14 111 1 1.204119983 0.1875 0.071428571 0.1875 14 0 0 16 X:15825896-15826015 6 sd FBtr0346799|FBtr0308132|FBtr0308131 15824447|15824447|15824447 15827682|15826608|15827681 ATGTGC 6mer3-8 dme-miR-305-3p X + 15825941 15826015 3'utr sd FlyBase G46635.1 AAAAGAAACAGATACAATATAGTTTTCCGAATTACCATTTAGATATGCATGGTCATGTGCAAATAGGATTAAGCC 12 15825979 0.98554193 7 12 92 1 1.255272505 0.111111111 0.25 0.5 12 0 0 18 X:15825941-15826015 6 6 5455 FBgn0003345 3188.213333 125.3966667 192.3633333 0.001881932 0.047848162 0.031190975 16 16 16 0.01 dme-miR-317-3p 6mer3-8 TGTGTT X 15826354 15826359 + X_15826354_15826359_+ 1 1 1 0 sd FBtr0346799|FBtr0308131|FBtr0308132 15824447|15824447|15824447 15827682|15827681|15826608 X + 15826323 15826363 3'utr sd FlyBase G61763.2 CAAAGGAGCGAGGGAGCGTAGGAGGATCTTGTGTGTTAAGC 7 15826353 0.976056522 5 6 31 0.875 0.84509804 0.375 0.142857143 0.25 7 1 0 7 X:15826323-15826363 6 sd FBtr0346799|FBtr0308132|FBtr0308131 15824447|15824447|15824447 15827682|15826608|15827681 TGTGTT 6mer3-8 dme-miR-317-3p X + 15826284 15826364 3'utr sd FlyBase G46637.1 TCCTGTCGTGGGAGCGCGAGTGTTGTGAGGTGAGGAGGGCAAAGGAGCGAGGGAGCGTAGGAGGATCTTGTGTGTTAAGCG 14 15826353 0.982937289 5 11 75 0.826086957 1.278753601 0.47826087 0.5 0.695652174 14 4 0 19 X:15826284-15826364 6 7 5456 FBgn0003345 3188.213333 125.3966667 192.3633333 0.002195587 0.055822855 0.036389471 1 1 1 0.01 dme-miR-278-3p 6mer2-7 CCACCG X 15826445 15826450 + X_15826445_15826450_+ 1 1 1 0 sd FBtr0346799|FBtr0308131|FBtr0308132 15824447|15824447|15824447 15827682|15827681|15826608 X + 15826391 15826464 3'utr sd FlyBase G61764.1 CATAGTGGCAAAAATGGATATGTAAGTAATTGAATTAAGCATGTGTCGAATGATCCACCGTTAATTAAATTATT 42 15826451 0.979624202 8 42 292 1 1.698970004 0 0.166666667 0.3 42 0 0 50 X:15826391-15826464 6 sd FBtr0346799|FBtr0308132|FBtr0308131 15824447|15824447|15824447 15827682|15826608|15827681 CCACCG 6mer2-7 dme-miR-278-3p X + 15826416 15826463 3'utr sd FlyBase G46638.1 GTAATTGAATTAAGCATGTGTCGAATGATCCACCGTTAATTAAATTAT 23 15826451 0.984871112 5 21 171 0.9375 1.477121255 0.0625 0.260869565 0.46875 23 2 0 30 X:15826416-15826463 6 31 5457 FBgn0003345 3188.213333 125.3966667 192.3633333 0.009723314 0.247215503 0.161153373 -6 -6 -6 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT X 15827009 15827014 + X_15827009_15827014_+ 1 1 1 0 sd FBtr0346799|FBtr0308131 15824447|15824447 15827682|15827681 X + 15826969 15827082 3'utr sd FlyBase G61768.1 ATTTCGAGAGCTAAGAAAACCAGCAACAAAAATATTTTAAAGCTGTAGACTTAAAAATATTATTATTAAAGATCACTAATGAATATGGTTGGCAAATATAGGTGGAGAGTAAAT 23 15827018 0.974194145 10 23 139 1 1.462397998 0.206896552 0.217391304 0.379310345 23 0 0 29 X:15826969-15827082 6 sd FBtr0346799|FBtr0308131 15824447|15824447 15827682|15827681 AGCTGT 6mer3-8 dme-miR-1008-3p X + 15826999 15827035 3'utr sd FlyBase G46640.1 AATATTTTAAAGCTGTAGACTTAAAAATATTATTATT 5 15827017 0.975953752 3 5 39 1 0.77815125 0 0.2 0.333333333 5 0 0 6 X:15826999-15827035 6 4.5 5458 FBgn0003345 3188.213333 125.3966667 192.3633333 0.001411449 0.035886121 0.023393232 -9 -8 -8.5 0.01 dme-miR-999-3p 6mer2-7 GTTAAC X 15850014 15850019 - X_15850014_15850019_- 1 1 1 0 UBL3 FBtr0300787|FBtr0074174 15849729|15849729 15850363|15850363 X - 15850009 15850036 3'utr UBL3 FlyBase G67789.1 TTTTAGAAACCGGACTTGTTAACCTAAT 11 15850018 0.618038209 4 10 59 0.923076923 1.079181246 0.076923077 0.090909091 0.230769231 11 1 0 12 X:15850009-15850036 6 UBL3 FBtr0300787|FBtr0074174 15849729|15849729 15850363|15850363 GTTAAC 6mer2-7 dme-miR-999-3p X - 15849997 15850038 3'utr UBL3 FlyBase G51029.1 GCTTTTAGAAACCGGACTTGTTAACCTAATTAGAGAATGGGT 13 15850018 0.956789701 4 11 78 0.952380952 1.301029996 0.285714286 0.461538462 0.666666667 13 1 0 20 X:15849997-15850038 6 11.5 5459 FBgn0026076 761.7933333 45.88 70.04333333 0.015095958 0.25065388 0.164184077 -1 -1 -1 0.01 dme-miR-988-3p 6mer3-8 ACAAGG X 15850190 15850195 - X_15850190_15850195_- 1 1 1 0 UBL3 FBtr0300787|FBtr0074174 15849729|15849729 15850363|15850363 X - 15850174 15850212 3'utr UBL3 FlyBase G67790.1 AATGTATGTCTGGATCAACAAGGCGCTTTGTTTCAACTA 10 15850185 0.708776064 3 10 83 1 1.079181246 0 0.2 0.333333333 10 0 0 12 X:15850174-15850212 6 UBL3 FBtr0300787|FBtr0074174 15849729|15849729 15850363|15850363 ACAAGG 6mer3-8 dme-miR-988-3p X - 15850180 15850212 3'utr UBL3 FlyBase G51030.1 AATGTATGTCTGGATCAACAAGGCGCTTTGTTT 6 15850185 0.745365588 2 6 59 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 X:15850180-15850212 6 8 5460 FBgn0026076 761.7933333 45.88 70.04333333 0.010501536 0.174367916 0.11421501 -10 -10 -10 0.01 dme-miR-277-3p 6mer3-8 TGCATT X 15862920 15862925 + X_15862920_15862925_+ 1 0.999701916 0.999850958 0.000210789 Gbeta13F FBtr0074107|FBtr0074111|FBtr0074106|FBtr0346794|FBtr0074110|FBtr0331597|FBtr0074108 15862795|15862795|15862795|15862795|15862795|15862795|15862795 15863177|15866084|15866084|15866084|15866084|15866084|15866175 X + 15862906 15863043 3'utr Gbeta13F FlyBase G61788.1 AAAGAACTTGAAAATGCATTAAAGGGTGGGGTGGGGTGTCAGGTCAACGGTTGCGCAGTCTGCGGATAGTGTTTCACCCATCATCTACATTGTGATCTAATGTATATGATTCGGTGTTACCGTCTCTGTGGTAAATAT 36 15862923 0.82190442 14 36 247 1 1.662757832 0.282608696 0.25 0.413043478 36 0 0 46 X:15862906-15863043 6 Gbeta13F FBtr0074108|FBtr0331597|FBtr0074110|FBtr0346794|FBtr0074106|FBtr0074111|FBtr0074107 15862795|15862795|15862795|15862795|15862795|15862795|15862795 15866175|15866084|15866084|15866084|15866084|15866084|15863177 TGCATT 6mer3-8 dme-miR-277-3p X + 15862893 15862944 3'utr Gbeta13F FlyBase G46656.1 AGAGGAAAAAGAAAAAGAACTTGAAAATGCATTAAAGGGTGGGGTGGGGTGT 23 15862923 0.955168166 5 23 108 1 1.505149978 0.28125 0.304347826 0.5 23 0 0 32 X:15862893-15862944 6 18 5461 FBgn0001105 5526.04 154.0466667 236.8166667 0.003257305 0.116847708 0.076008164 -3 -3 -3 0.01 dme-miR-999-3p 6mer3-8 AGTTAA X 15863796 15863801 + X_15863796_15863801_+ 1 1 1 0 Gbeta13F FBtr0074111|FBtr0074106|FBtr0346794|FBtr0074110|FBtr0331597|FBtr0074108 15862795|15862795|15862795|15862795|15862795|15862795 15866084|15866084|15866084|15866084|15866084|15866175 X + 15863731 15863813 3'utr Gbeta13F FlyBase G61791.1 AACTTCAGAATGTGTGGATGTGGATGATCCTGATGCAAGGTGGGGATGGTGGAGAAGTCAAATAAAGTTAAAGCATTTAAAAA 23 15863777 0.965920118 6 22 122 0.964285714 1.431363764 0.357142857 0.217391304 0.357142857 23 1 0 27 X:15863731-15863813 6 Gbeta13F FBtr0074108|FBtr0331597|FBtr0074110|FBtr0346794|FBtr0074106|FBtr0074111 15862795|15862795|15862795|15862795|15862795|15862795 15866175|15866084|15866084|15866084|15866084|15866084 AGTTAA 6mer3-8 dme-miR-999-3p X + 15863716 15863806 3'utr Gbeta13F FlyBase G46661.1 GCGTATAATACATAAAACTTCAGAATGTGTGGATGTGGATGATCCTGATGCAAGGTGGGGATGGTGGAGAAGTCAAATAAAGTTAAAGCAT 26 15863777 0.968806586 8 24 138 0.866666667 1.591064607 0.644444444 0.384615385 0.644444444 26 6 0 39 X:15863716-15863806 6 3 5462 FBgn0001105 5526.04 154.0466667 236.8166667 0.000542884 0.019474618 0.012668027 19 19 19 0.01 dme-miR-12-5p 6mer3-8 AATACT X 15864489 15864494 + X_15864489_15864494_+ 1 0.999999697 0.999999848 2.12E-07 Gbeta13F FBtr0074111|FBtr0074106|FBtr0346794|FBtr0074110|FBtr0331597|FBtr0074108 15862795|15862795|15862795|15862795|15862795|15862795 15866084|15866084|15866084|15866084|15866084|15866175 X + 15864465 15864513 3'utr Gbeta13F FlyBase G61794.1 AAAAACTAAAGCTTATATTGTGAAAATACTGATATTGTCTTGCTGTCTT 11 15864480 0.981796973 6 10 85 0.928571429 0.812913357 0.071428571 0.272727273 0.428571429 11 0 1 13 X:15864465-15864513 6 Gbeta13F FBtr0074108|FBtr0331597|FBtr0074110|FBtr0346794|FBtr0074106|FBtr0074111 15862795|15862795|15862795|15862795|15862795|15862795 15866175|15866084|15866084|15866084|15866084|15866084 AATACT 6mer3-8 dme-miR-12-5p X + 15864435 15864513 3'utr Gbeta13F FlyBase G46664.1 AACGAAGCGAAACGATTGTAGAATGCAAACAAAAACTAAAGCTTATATTGTGAAAATACTGATATTGTCTTGCTGTCTT 14 15864481 0.981809468 7 14 97 1 1.342422681 0 0.428571429 0.636363636 14 0 0 22 X:15864435-15864513 6 10.5 5463 FBgn0001105 5526.04 154.0466667 236.8166667 0.001900095 0.068161163 0.044338096 9 8 8.5 0.01 dme-miR-308-3p 7mer-m1 TGTGATT X 15864781 15864787 + X_15864781_15864787_+ 0.521223855 0.521223855 0.521223855 0 Gbeta13F FBtr0074111|FBtr0074106|FBtr0346794|FBtr0074110|FBtr0331597|FBtr0074108 15862795|15862795|15862795|15862795|15862795|15862795 15866084|15866084|15866084|15866084|15866084|15866175 X + 15864698 15864809 3'utr Gbeta13F FlyBase G61796.1 TGTAATAAACTGATTGGTTTATTGACCTTCTTGAAGTATTCTTTAACGTTATAGTATCTTGGTCCGATAGGTAAATGGTAAATTGTGATTTAAAGTGAATAGTTTTTCAAGC 122 15864780 0.988532762 15 116 1074 0.963768116 1.646730386 0.282608696 0.123966942 0.231884058 121 3 2 133 X:15864698-15864809 7 Gbeta13F FBtr0074108|FBtr0331597|FBtr0074110|FBtr0346794|FBtr0074106|FBtr0074111 15862795|15862795|15862795|15862795|15862795|15862795 15866175|15866084|15866084|15866084|15866084|15866084 TGTGATT 7mer-m1 dme-miR-308-3p X + 15864760 15864803 3'utr Gbeta13F FlyBase G46666.1 TCCGATAGGTAAATGGTAAATTGTGATTTAAAGTGAATAGTTTT 80 15864780 0.653777165 6 80 661 1 2.045322979 0.297297297 0.325 0.513513514 80 0 0 111 X:15864760-15864803 7 97 5464 FBgn0001105 5526.04 154.0466667 236.8166667 0.017553257 0.629679318 0.40959955 1 1 1 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA X 15865087 15865093 + X_15865087_15865093_+ 0.808818836 0.808818836 0.808818836 0 Gbeta13F FBtr0074111|FBtr0074111|FBtr0074106|FBtr0074106|FBtr0346794|FBtr0346794|FBtr0074110|FBtr0074110|FBtr0331597|FBtr0331597|FBtr0074108|FBtr0074108 15862795|15862795|15862795|15862795|15862795|15862795|15862795|15862795|15862795|15862795|15862795|15862795 15866084|15866084|15866084|15866084|15866084|15866084|15866084|15866084|15866084|15866084|15866175|15866175 X + 15865041 15865150 3'utr Gbeta13F FlyBase G61798.2 AACAGCTGCAGTTATTTGGGCTCTGCTTTTTCGCCATAGATGGACTTACTTAATTTTAGTACATTCTGGACATTCTGGACGGCCATTTCAAAACTAATGCTGTTTCAAAA 149 15865081 0.907835736 12 148 1313 0.99408284 2.225309282 0.00591716 0.10738255 0.213017751 149 1 0 168 X:15865041-15865150 7 Gbeta13F FBtr0074108|FBtr0074108|FBtr0331597|FBtr0331597|FBtr0074110|FBtr0074110|FBtr0346794|FBtr0346794|FBtr0074106|FBtr0074106|FBtr0074111|FBtr0074111 15862795|15862795|15862795|15862795|15862795|15862795|15862795|15862795|15862795|15862795|15862795|15862795 15866175|15866175|15866084|15866084|15866084|15866084|15866084|15866084|15866084|15866084|15866084|15866084 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" X + 15865050 15865104 3'utr Gbeta13F FlyBase G46667.1 AGTTATTTGGGCTCTGCTTTTTCGCCATAGATGGACTTACTTAATTTTAGTACAT 102 15865081 0.980398955 6 97 837 0.967948718 1.400825697 0 0.352941176 0.576923077 102 0 5 151 X:15865050-15865104 7 120 5465 FBgn0001105 5526.04 154.0466667 236.8166667 0.021715369 0.778984723 0.506721092 6 6 6 0.01 dme-miR-92b-3p 7mer-m1 TGCAATT X 15876429 15876435 - X_15876429_15876435_- 0.765584106 0.765586663 0.765585384 1.84E-06 tay FBtr0310065 15876366 15877234 X - 15876433 15876472 3'utr tay FlyBase G67816.1 TTTGTGCATTACGTGTTTAAGGACTAATTATCATATATGC 6 15876446 0.81533641 4 6 55 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 X:15876433-15876472 2 tay FBtr0310065 15876366 15877234 TGCAATT 7mer-m1 dme-miR-92b-3p X - 15876408 15876500 3'utr tay FlyBase G51048.1 TATGTATATCAGTGACAGCTTCATTCCCTTTGTGCATTACGTGTTTAAGGACTAATTATCATATATGCAATTTATGTAAAAATTGATAAAACT 19 15876444 0.98763848 10 19 167 1 1.477121255 0.2 0.421052632 0.633333333 19 0 0 30 X:15876408-15876500 7 3 5466 FBgn0260938 850.7 11.95 18.32333333 0.003526508 0.251046025 0.163725669 11 9 10 0.01 dme-miR-14-3p 6mer3-8 AAGACT X 15876869 15876874 - X_15876869_15876874_- 1 1 1 0 tay FBtr0074167|FBtr0310065|FBtr0310066|FBtr0340414 15876681|15876366|15876681|15876681 15877234|15877234|15877234|15877234 X - 15876727 15876936 3'utr tay FlyBase G67818.1 GATTACGATGCAGATGCAGATGCAGATGTTTGTGGCAAACAAAAATCAAATTAAAAGAGGTTAAGACTTCCTTATACTTCAGACCTAGCATTCAACCTAAGCACTGAGTCCCCACATTGGCAAAATACTTTCCTCGATCTTAATATGGTCGCGCGTTGAAACGTCACATAAGTAATACGAACTTTACTTATTTTTAATGAATACAAATTA 173 15876876 0.978391699 22 161 1163 0.9375 1.653212514 0.015625 0.098265896 0.1875 173 9 3 180 X:15876727-15876936 6 tay FBtr0310066|FBtr0340414|FBtr0074167|FBtr0310065 15876681|15876681|15876681|15876366 15877234|15877234|15877234|15877234 AAGACT 6mer3-8 dme-miR-14-3p X - 15876757 15876951 3'utr tay FlyBase G51051.1 ACAGATGAAGATGAAGATTACGATGCAGATGCAGATGCAGATGTTTGTGGCAAACAAAAATCAAATTAAAAGAGGTTAAGACTTCCTTATACTTCAGACCTAGCATTCAACCTAAGCACTGAGTCCCCACATTGGCAAAATACTTTCCTCGATCTTAATATGGTCGCGCGTTGAAACGTCACATAAGTAATACGA 97 15876876 0.979746413 21 93 643 0.959459459 2.152288344 0.040540541 0.371134021 0.587837838 97 6 0 142 X:15876757-15876951 6 92 5467 FBgn0260938 850.7 11.95 18.32333333 0.108146233 7.69874477 5.020920502 2 2 2 0.01 dme-bantam-3p 6mer3-8 TGATCT X 15904409 15904414 + X_15904409_15904414_+ 1 1 1 0 shi FBtr0074119|FBtr0301597|FBtr0111037|FBtr0074122|FBtr0074118|FBtr0333718|FBtr0111036|FBtr0074121 15903798|15903798|15903798|15903798|15903798|15903798|15903798|15903798 15905068|15905068|15905068|15905068|15905068|15905667|15905068|15905068 X + 15904315 15904489 3'utr shi FlyBase G61854.1 CCTCCCCTAACTCTCCACACATTATCAACGGCATACGCTCAAAAGTTATGTAAACTATTTGTATGGGCAGATGCTTAGTGACGATATTAACCAATGATCTTAATTATATAGCTAACTATTAATAAATAGCTTTCGTTAACTGCATTGTGTTGTTGTTGATGTTAAACTATAAAAA 167 15904409 0.987375016 20 161 1424 0.971428571 2.008600172 0.071428571 0.203592814 0.366666667 167 5 1 204 X:15904315-15904489 6 shi FBtr0074118|FBtr0111036|FBtr0074121|FBtr0333718|FBtr0301597|FBtr0074122|FBtr0074119|FBtr0111037 15903798|15903798|15903798|15903798|15903798|15903798|15903798|15903798 15905068|15905068|15905068|15905667|15905068|15905068|15905068|15905068 TGATCT 6mer3-8 dme-bantam-3p X + 15904324 15904476 3'utr shi FlyBase G46713.1 ACTCTCCACACATTATCAACGGCATACGCTCAAAAGTTATGTAAACTATTTGTATGGGCAGATGCTTAGTGACGATATTAACCAATGATCTTAATTATATAGCTAACTATTAATAAATAGCTTTCGTTAACTGCATTGTGTTGTTGTTGATGT 96 15904409 0.929642359 18 94 789 0.98630137 1.857332496 0.04109589 0.364583333 0.582191781 96 1 1 144 X:15904324-15904476 6 110 5468 FBgn0003392 1552.753333 51.10333333 78.22666667 0.070841902 2.152501468 1.406170104 0 0 0 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA X 15904992 15904997 + X_15904992_15904997_+ 1 1 1 0 shi FBtr0074119|FBtr0301597|FBtr0111037|FBtr0074122|FBtr0074118|FBtr0333718|FBtr0111036|FBtr0074121 15903798|15903798|15903798|15903798|15903798|15903798|15903798|15903798 15905068|15905068|15905068|15905068|15905068|15905667|15905068|15905068 X + 15904916 15905016 3'utr shi FlyBase G61858.1 ATTCCTCTTCGTATTTGTAGTTACATATTTGCATAAGTTTGGTCAGGTCAGAGGTCAAAGTACTGATTTGAATTCAATGTGAAAGCTGGTTATTTTGATTG 23 15904982 0.930707217 8 19 174 0.866666667 1.113943352 0.533333333 0.217391304 0.4 23 3 1 26 X:15904916-15905016 6 shi FBtr0074118|FBtr0111036|FBtr0074121|FBtr0333718|FBtr0301597|FBtr0074122|FBtr0074119|FBtr0111037 15903798|15903798|15903798|15903798|15903798|15903798|15903798|15903798 15905068|15905068|15905068|15905667|15905068|15905068|15905068|15905068 ATGTGA 6mer3-8 dme-miR-1003-3p X + 15904950 15905010 3'utr shi FlyBase G46715.1 AAGTTTGGTCAGGTCAGAGGTCAAAGTACTGATTTGAATTCAATGTGAAAGCTGGTTATTT 14 15904982 0.989427895 5 9 89 0.666666667 0.669006781 0.571428571 0.285714286 0.523809524 14 5 2 14 X:15904950-15905010 6 4.5 5469 FBgn0003392 1552.753333 51.10333333 78.22666667 0.002898078 0.088056878 0.057525141 10 10 10 0.01 dme-bantam-3p 6mer3-8 TGATCT X 15906135 15906140 + X_15906135_15906140_+ 1 1 1 0 shi FBtr0333717|FBtr0340413|FBtr0301594|FBtr0301596|FBtr0074123|FBtr0301595|FBtr0074124 15905923|15905923|15905923|15905923|15905923|15905923|15905923 15906716|15906716|15906252|15906252|15906252|15906252|15906252 X + 15906118 15906154 3'utr shi FlyBase G61863.1 AAAAAGTGTTTTACACATGATCTTTTGGACAATTCAA 11 15906135 0.887108386 3 11 108 1 1.041392685 0.636363636 0 0 11 0 0 11 X:15906118-15906154 6 shi FBtr0074123|FBtr0301595|FBtr0340413|FBtr0074124|FBtr0301594|FBtr0301596|FBtr0333717 15905923|15905923|15905923|15905923|15905923|15905923|15905923 15906252|15906252|15906716|15906252|15906252|15906252|15906716 TGATCT 6mer3-8 dme-bantam-3p X + 15906120 15906225 3'utr shi FlyBase G46719.1 AAAGTGTTTTACACATGATCTTTTGGACAATTCAACATTCAAATTAGTGCTTTCGAATTAAGTTTATCGGGGATACCATTTACTTTTTAAAGTATATTTGAACGTG 9 15906135 0.988686838 7 9 84 1 1 0.3 0.111111111 0.2 9 0 0 10 X:15906120-15906225 6 7.5 5470 FBgn0003392 1552.753333 51.10333333 78.22666667 0.00483013 0.146761464 0.095875234 0 0 0 0.01 dme-miR-14-3p 7mer-A1 AGACTGA X 15907012 15907018 - X_15907012_15907018_- 0.823349562 0.823349562 0.823349562 0 CycD FBtr0300391|FBtr0300393|FBtr0300392 15906820|15906820|15906820 15907273|15907273|15907273 X - 15906856 15907056 3'utr CycD FlyBase G67863.2 TCATCATGAAACTTTGAAATGGATGAAACATAAAAACGAGACTGATTGTAAGCAGCAAAGCAACATTTTTTTTTTGTATATAAGCTTTTCGAAATCCTACACAGATAACCAAAAAAGAACGAACTATTAAATGCAATTTTTTTAAAAACCATCCAACATAAAGAGAAAAACAATATGTTAAAGTTAACTTTGGATAACAAT 211 15907011 0.951679565 23 203 967 0.968992248 2.397940009 0.085271318 0.18957346 0.337209302 211 8 0 250 X:15906856-15907056 7 CycD FBtr0300391|FBtr0300393|FBtr0300392 15906820|15906820|15906820 15907273|15907273|15907273 AGACTGA 7mer-A1 dme-miR-14-3p X - 15906993 15907073 3'utr CycD FlyBase G51089.1 AAAATAGTTTTAAATAATCATCATGAAACTTTGAAATGGATGAAACATAAAAACGAGACTGATTGTAAGCAGCAAAGCAAC 137 15907011 0.952073167 9 131 585 0.96097561 2.294466226 0.141463415 0.386861314 0.590243902 137 8 0 197 X:15906993-15907073 7 151 5471 FBgn0010315 578 31.73666667 48.65333333 0.261245675 4.757903582 3.103590025 -7 -7 -7 0.01 dme-miR-1003-3p 7mer-A1 TGTGAGA X 15935696 15935702 - X_15935696_15935702_- 0.823349562 0.823349562 0.823349562 0 Stim FBtr0308705 15934899 15938324 X - 15935676 15935723 5'utr Stim FlyBase G67900.1 CTACAGTCGGCCAGAGAGGCTTGTGAGAAATTGCGTAAGAAACGGTCA 11 15935702 0.950522658 6 9 40 0.818181818 0.954242509 0.090909091 0 0 11 2 0 9 X:15935676-15935723 7 Stim FBtr0308705 15934899 15938324 TGTGAGA 7mer-A1 dme-miR-1003-3p X - 15935696 15935725 5'utr Stim FlyBase G51116.1 AGCTACAGTCGGCCAGAGAGGCTTGTGAGA 8 15935702 0.621104993 2 8 26 1 1.041392685 0.090909091 0.375 0.545454545 8 0 0 11 X:15935696-15935725 6 9.5 5472 FBgn0045073 1420.51 79.57666667 121.2 0.006687739 0.119381728 0.078382838 0 0 0 0.01 dme-miR-282-5p 7mer-A1 GAGGCTA X 15937659 15937665 - X_15937659_15937665_- 0.823349562 0.823349562 0.823349562 0 Stim FBtr0308705 15934899 15938324 X - 15937638 15937684 5'utr Stim FlyBase G67907.1 TCAGGATCGCTTTGGCATGGAGGCTATTGCCAGCTTGCATCGTCAGC 15 15937667 0.935609347 2 13 102 0.947368421 1.255272505 0.105263158 0.2 0.368421053 15 1 0 18 X:15937638-15937684 7 Stim FBtr0308705 15934899 15938324 GAGGCTA 7mer-A1 dme-miR-282-5p X - 15937640 15937683 5'utr Stim FlyBase G51118.1 CAGGATCGCTTTGGCATGGAGGCTATTGCCAGCTTGCATCGTCA 7 15937667 0.978262545 2 7 48 1 1.146128036 0.357142857 0.857142857 0.928571429 7 0 0 14 X:15937640-15937683 7 9 5473 FBgn0045073 1420.51 79.57666667 121.2 0.006335753 0.113098479 0.074257426 2 2 2 0.01 dme-miR-965-3p 7mer-m8 TACGCTT X 15944222 15944228 + X_15944222_15944228_+ 0.620204855 0.620204855 0.620204855 0 CG8924 FBtr0074130 15944054 15944449 X + 15944203 15944279 3'utr CG8924 FlyBase G61872.1 ATACATAGGTTTACTTAATTACGCTTTGGAGATGCCACAGTTTTATCCTTGGTTGAAAAACTCTTGCCGTTCAATCA 38 15944221 0.833567663 6 36 342 0.954545455 1.62324929 0.431818182 0.131578947 0.25 38 2 0 42 X:15944203-15944279 7 CG8924 FBtr0074130 15944054 15944449 TACGCTT 7mer-m8 dme-miR-965-3p X + 15944203 15944243 3'utr CG8924 FlyBase G46725.1 ATACATAGGTTTACTTAATTACGCTTTGGAGATGCCACAGT 27 15944221 0.658914449 5 26 259 0.955555556 1.633468456 0.577777778 0.407407407 0.644444444 27 2 0 43 X:15944203-15944243 7 29.5 5474 FBgn0030710 226.3333333 10.62 16.19333333 0.130338733 2.777777778 1.82173734 1 1 1 0.01 dme-miR-79-3p 6mer2-7 AGCTTT X 15995132 15995137 + X_15995132_15995137_+ 1 1 1 0 exd FBtr0074137|FBtr0333322|FBtr0074135|FBtr0333323 15994971|15994971|15994971|15994971 15995996|15996509|15995996|15996509 X + 15995058 15995160 3'utr exd FlyBase G61892.1 AGTTTTTTCATAATTATGCGGCTTATATTTGCTTCTTCGCCAAGAACAACAATTCTTAAGGGATTTTTAAATTCAGCTTTCTGTCCTTTGGTTTCGAGTCAGA 42 15995136 0.97312565 14 37 397 0.910714286 1.40654018 0.267857143 0.214285714 0.410714286 42 4 1 51 X:15995058-15995160 6 exd FBtr0074135|FBtr0333323|FBtr0074137|FBtr0333322 15994971|15994971|15994971|15994971 15995996|15996509|15995996|15996509 AGCTTT 6mer2-7 dme-miR-79-3p X + 15995044 15995161 3'utr exd FlyBase G46740.1 AAAATCTAACATGCAGTTTTTTCATAATTATGCGGCTTATATTTGCTTCTTCGCCAAGAACAACAATTCTTAAGGGATTTTTAAATTCAGCTTTCTGTCCTTTGGTTTCGAGTCAGAT 28 15995136 0.993066792 11 23 279 0.88372093 1.579783597 0.162790698 0.321428571 0.558139535 28 5 0 38 X:15995044-15995161 6 20 5475 FBgn0000611 1497 64.64333333 99.30333333 0.013360053 0.309389986 0.201403108 -4 -4 -4 0.01 dme-miR-79-3p 6mer2-7 AGCTTT X 16078050 16078055 - X_16078050_16078055_- 1 1 1 0 Tob FBtr0301652|FBtr0310446 16074715|16077885 16079819|16079819 X - 16078037 16078074 5'utr Tob FlyBase G67976.1 AAGTTATTCAAGCTATGGAAGCTTTTACATATAAAAAC 13 16078059 0.850336211 2 12 104 0.888888889 1.204119983 0.055555556 0.307692308 0.5 13 2 0 16 X:16078037-16078074 6 Tob FBtr0310446|FBtr0301652 16077885|16074715 16079819|16079819 AGCTTT 6mer2-7 dme-miR-79-3p X - 16078036 16078074 5'utr Tob FlyBase G51168.1 AAGTTATTCAAGCTATGGAAGCTTTTACATATAAAAACA 8 16078059 0.975258079 2 8 62 1 0.954242509 0 0.125 0.222222222 8 0 0 9 X:16078036-16078074 6 10.5 5476 FBgn0028397 630.16 18.44 28.35666667 0.016662435 0.569414317 0.370283296 4 4 4 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 16093289 16093295 - X_16093289_16093295_- 0.801970437 0.801970437 0.801970437 0 CG42354 FBtr0299950|FBtr0299950|FBtr0299950|FBtr0310316|FBtr0310316|FBtr0310316|FBtr0299951|FBtr0299951|FBtr0299951|FBtr0310314|FBtr0310314|FBtr0310314|FBtr0310315|FBtr0310315|FBtr0310315|FBtr0299949|FBtr0299949|FBtr0299949 16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057 16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102 X - 16093272 16093305 3'utr CG42354 FlyBase G67989.1 TATATATATTTGTGATACCTATACTAATATTTTT 82 16093297 0.723195785 5 73 863 0.894736842 1.452297671 0 0.134146341 0.252631579 82 8 2 85 X:16093272-16093305 7 CG42354 FBtr0310316|FBtr0310316|FBtr0310316|FBtr0299950|FBtr0299950|FBtr0299950|FBtr0299949|FBtr0299949|FBtr0299949|FBtr0310315|FBtr0310315|FBtr0310315|FBtr0310314|FBtr0310314|FBtr0310314|FBtr0299951|FBtr0299951|FBtr0299951 16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057 16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 16093273 16093305 3'utr CG42354 FlyBase G51174.1 TATATATATTTGTGATACCTATACTAATATTTT 49 16093297 0.699319491 7 44 496 0.880597015 1.469822016 0 0.326530612 0.507462687 49 7 1 59 X:16093273-16093305 7 65.5 5477 FBgn0259700 906.0733333 39.32 60.44666667 0.072289954 1.665818922 1.083599868 2 2 2 0.01 dme-miR-276a-3p 7mer-A1 GTTCCTA X 16093917 16093923 - X_16093917_16093923_- 0.823349562 0.823331555 0.823340559 1.27E-05 CG42354 FBtr0299950|FBtr0310316|FBtr0299951|FBtr0310314|FBtr0310315|FBtr0299949 16093057|16093057|16093057|16093057|16093057|16093057 16094102|16094102|16094102|16094102|16094102|16094102 X - 16093900 16094015 3'utr CG42354 FlyBase G67994.1 CGCAACAGAGGTCACATATACATATATACTTTAATCCCAAGATATACTTAAGGACAGAGTGTGCTAGTAAAGCGCACACCGAATTTGCGCTGGTTCCTAACTTATACATGTGTGTG 40 16093926 0.934980454 13 40 215 1 1.672097858 0.063829787 0.15 0.276595745 40 0 0 47 X:16093900-16094015 7 CG42354 FBtr0310316|FBtr0299950|FBtr0299949|FBtr0310315|FBtr0310314|FBtr0299951 16093057|16093057|16093057|16093057|16093057|16093057 16094102|16094102|16094102|16094102|16094102|16094102 GTTCCTA 7mer-A1 dme-miR-276a-3p X - 16093889 16093998 3'utr CG42354 FlyBase G51179.1 ATACATATATACTTTAATCCCAAGATATACTTAAGGACAGAGTGTGCTAGTAAAGCGCACACCGAATTTGCGCTGGTTCCTAACTTATACATGTGTGTGTTTGTAATATT 22 16093926 0.975771596 10 20 128 0.96875 1.491361694 0.15625 0.318181818 0.53125 22 1 0 31 X:16093889-16093998 7 11.5 5478 FBgn0259700 906.0733333 39.32 60.44666667 0.012692129 0.292472024 0.190250358 3 3 3 0.01 dme-bantam-3p 6mer3-8 TGATCT X 16277537 16277542 + X_16277537_16277542_+ 1 1 1 0 Prosalpha4 FBtr0074210 16277308 16277587 X + 16277487 16277553 3'utr Prosalpha4 FlyBase G61937.1 AATTACCACTTTCTATTCTTCGGAACCCTGTAAAACGGTATGAAAATATTTGATCTGTATAAAATAC 18 16277537 0.691296933 8 17 141 0.952380952 1.301029996 0.19047619 0.111111111 0.238095238 18 1 0 20 X:16277487-16277553 6 Prosalpha4 FBtr0074210 16277308 16277587 TGATCT 6mer3-8 dme-bantam-3p X + 16277523 16277551 3'utr Prosalpha4 FlyBase G46771.1 GGTATGAAAATATTTGATCTGTATAAAAT 6 16277536 0.720683801 2 5 51 0.9 0.954242509 0.1 0.5 0.7 6 1 0 9 X:16277523-16277551 6 8 5479 FBgn0004066 1281.22 133.8966667 204.6 0.006244049 0.059747567 0.039100684 0 1 0.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA X 16284201 16284208 + X_16284201_16284208_+ 0.674982063 0.674982063 0.674982063 0 eas FBtr0308617|FBtr0343520|FBtr0308618 16283732|16283732|16283732 16285618|16285618|16285618 X + 16284146 16284226 3'utr eas FlyBase G61942.1 GGCGACCAAACCCATGCCGATGATTTGGAAGAAGACGCAGAGCTTTCTTGATTTAGTACCTGAACGTTTTAGTGATGCTGA 23 16284198 0.98959922 11 22 208 0.931034483 1.431363764 0.172413793 0.260869565 0.413793103 23 2 0 27 X:16284146-16284226 8 eas FBtr0308618|FBtr0343520|FBtr0308617 16283732|16283732|16283732 16285618|16285618|16285618 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" X + 16284156 16284225 3'utr eas FlyBase G46774.1 CCCATGCCGATGATTTGGAAGAAGACGCAGAGCTTTCTTGATTTAGTACCTGAACGTTTTAGTGATGCTG 9 16284198 0.989194274 7 8 75 0.857142857 1.079181246 0.357142857 0.444444444 0.642857143 9 2 0 12 X:16284156-16284225 8 13 5480 FBgn0000536 1202.386667 57.26666667 87.69666667 0.01081183 0.227008149 0.148238245 3 3 3 0.01 dme-bantam-3p 6mer3-8 TGATCT X 16284434 16284439 + X_16284434_16284439_+ 0.999999829 0.999999996 0.999999912 1.41E-07 eas FBtr0308617|FBtr0343520|FBtr0308618 16283732|16283732|16283732 16285618|16285618|16285618 X + 16284374 16284475 3'utr eas FlyBase G61943.1 ACCTCGAGGCTCTGGACAGTCCGATTGTCTTCTCCCACAACGATCTTCTGCTGGGAAATGTGATCTATACGCAGAGCCTGAATACGGTGAACTTCATCGACT 17 16284440 0.977931239 7 15 104 0.894736842 1.230448921 0.315789474 0.117647059 0.210526316 17 2 0 17 X:16284374-16284475 6 eas FBtr0308618|FBtr0343520|FBtr0308617 16283732|16283732|16283732 16285618|16285618|16285618 TGATCT 6mer3-8 dme-bantam-3p X + 16284369 16284457 3'utr eas FlyBase G46775.1 TGAATACCTCGAGGCTCTGGACAGTCCGATTGTCTTCTCCCACAACGATCTTCTGCTGGGAAATGTGATCTATACGCAGAGCCTGAATA 20 16284440 0.953240683 9 17 96 0.892857143 1.096910013 0.25 0.368421053 0.571428571 19 2 1 25 X:16284369-16284457 6 11 5481 FBgn0000536 1202.386667 57.26666667 87.69666667 0.009148471 0.192083818 0.125432362 -6 -6 -6 0.01 dme-miR-980-3p 7mer-A1 GCAGCTA X 16285083 16285089 + X_16285083_16285089_+ 0.823349397 0.823161238 0.823255317 0.000133077 eas FBtr0308617|FBtr0343520|FBtr0308618 16283732|16283732|16283732 16285618|16285618|16285618 X + 16285041 16285121 3'utr eas FlyBase G61944.1 AATGAGTACTTGGCTCGAAAGGTGGAGTTTTTGTCATTGACTGCAGCTAAGAACAATAAGTGATTTCTCTCTCCCGGCCAC 57 16285105 0.982797039 10 54 405 0.95890411 1.544068044 0.287671233 0.210526316 0.383561644 57 2 1 70 X:16285041-16285121 7 eas FBtr0308618|FBtr0343520|FBtr0308617 16283732|16283732|16283732 16285618|16285618|16285618 GCAGCTA 7mer-A1 dme-miR-980-3p X + 16285043 16285119 3'utr eas FlyBase G46776.1 TGAGTACTTGGCTCGAAAGGTGGAGTTTTTGTCATTGACTGCAGCTAAGAACAATAAGTGATTTCTCTCTCCCGGCC 31 16285105 0.979477271 6 30 207 0.975609756 1.602059991 0.146341463 0.258064516 0.43902439 31 1 0 40 X:16285043-16285119 7 19 5482 FBgn0000536 1202.386667 57.26666667 87.69666667 0.015801905 0.331781141 0.216655897 -22 -22 -22 0.01 dme-miR-283-5p 6mer3-8 TGATAT X 16285157 16285162 + X_16285157_16285162_+ 1 0.999999976 0.999999988 0 eas FBtr0308617|FBtr0343519|FBtr0074212|FBtr0343520|FBtr0308618|FBtr0074214|FBtr0074211|FBtr0308619 16283732|16285102|16285102|16283732|16283732|16285102|16285102|16285102 16285618|16285618|16285618|16285618|16285618|16285618|16285618|16285618 X + 16285146 16285196 3'utr eas FlyBase G61945.1 TATGTGCCCAGTGATATATGTATAAACTAAGGCTGGAACGGGTCTCAATGT 22 16285169 0.765860597 6 14 135 0.615384615 0.903089987 0.423076923 0.090909091 0.230769231 22 9 1 16 X:16285146-16285196 6 eas FBtr0074211|FBtr0308619|FBtr0308618|FBtr0074214|FBtr0074212|FBtr0343520|FBtr0308617|FBtr0343519 16285102|16285102|16283732|16285102|16285102|16283732|16283732|16285102 16285618|16285618|16285618|16285618|16285618|16285618|16285618|16285618 TGATAT 6mer3-8 dme-miR-283-5p X + 16285144 16285206 3'utr eas FlyBase G46777.1 ATTATGTGCCCAGTGATATATGTATAAACTAAGGCTGGAACGGGTCTCAATGTTATACATATG 19 16285172 0.811143602 8 16 106 0.827586207 0.77815125 0.551724138 0.473684211 0.655172414 19 2 3 24 X:16285144-16285206 6 9.5 5483 FBgn0000536 1202.386667 57.26666667 87.69666667 0.007900953 0.16589057 0.108327949 -12 -15 -13.5 0.01 dme-miR-263a-5p 6mer3-8 GTGCCA X 16285275 16285280 + X_16285275_16285280_+ 1 1 1 0 eas FBtr0308617|FBtr0343519|FBtr0074212|FBtr0343520|FBtr0308618|FBtr0074214|FBtr0074211|FBtr0308619 16283732|16285102|16285102|16283732|16283732|16285102|16285102|16285102 16285618|16285618|16285618|16285618|16285618|16285618|16285618|16285618 X + 16285253 16285328 3'utr eas FlyBase G61947.1 AACTTAAATTAGTGTCGTGTTCGTGCCAGCCTTAGTGTATGTACAGTGCTCACTCGAAACAGTGGACTATTGAGAA 15 16285292 0.986796904 6 13 109 0.833333333 1.176091259 0.277777778 0.2 0.333333333 15 3 0 15 X:16285253-16285328 6 eas FBtr0074211|FBtr0308619|FBtr0308618|FBtr0074214|FBtr0074212|FBtr0343520|FBtr0308617|FBtr0343519 16285102|16285102|16283732|16285102|16285102|16283732|16283732|16285102 16285618|16285618|16285618|16285618|16285618|16285618|16285618|16285618 GTGCCA 6mer3-8 dme-miR-263a-5p X + 16285234 16285342 3'utr eas FlyBase G46778.1 AGAAACAAAAACCGAAACAAACTTAAATTAGTGTCGTGTTCGTGCCAGCCTTAGTGTATGTACAGTGCTCACTCGAAACAGTGGACTATTGAGAACCAAGGGTGTGCAC 9 16285284 0.969184756 7 8 51 1 1.146128036 0.142857143 0.444444444 0.642857143 9 0 0 14 X:16285234-16285342 6 7 5484 FBgn0000536 1202.386667 57.26666667 87.69666667 0.005821755 0.122235157 0.079820594 -17 -9 -13 0.01 dme-miR-305-5p 6mer2-7 GTACAA X 16292230 16292235 + X_16292230_16292235_+ 1 1 1 0 caz FBtr0334992 16292078 16293520 X + 16292194 16292253 3'utr caz FlyBase G61963.1 GAAAGACAAGCGTACAATGAAGCCCAAGATTTGGCTGTACAAGAACAAGGAGACCGGCGC 23 16292225 0.941662042 4 23 92 1 1.431363764 0.296296296 0.130434783 0.259259259 23 0 0 27 X:16292194-16292253 6 caz FBtr0334992 16292078 16293520 GTACAA 6mer2-7 dme-miR-305-5p X + 16292194 16292239 3'utr caz FlyBase G46787.1 GAAAGACAAGCGTACAATGAAGCCCAAGATTTGGCTGTACAAGAAC 13 16292224 0.9313284 4 13 49 1 1.278753601 0.157894737 0.307692308 0.526315789 13 0 0 19 X:16292194-16292239 6 14.5 5485 FBgn0011571 288.6766667 20.94333333 31.84666667 0.050229207 0.692344421 0.455306678 5 6 5.5 0.01 dme-miR-965-3p 7mer-m8 TACGCTT X 16293262 16293268 + X_16293262_16293268_+ 0.620204855 0.620204855 0.620204855 0 caz FBtr0334992|FBtr0334990|FBtr0334991|FBtr0074217 16292078|16293194|16293194|16293194 16293520|16293520|16293520|16293520 X + 16293162 16293336 stop_codon caz FlyBase G61967.1 AAACGATGGAGGCATGCGCTCGAGACCATATTAAGCGCATGGTAGCCAGCCGAACGCGGCACCTATTTTTTTCACTTTTACTTATTAATTGTAGCGAGAGTACGCTTTTAAATGTACTTTTAAAATTAACAGTCAGAGCAACTTTTAAATGATAATTGCCAGCACACGACTTCAT 71 16293269 0.985598263 25 68 552 0.966292135 1.633468456 0.337078652 0.183098592 0.348314607 71 2 1 86 X:16293162-16293336 7 caz FBtr0334991|FBtr0074217|FBtr0334992|FBtr0334990 16293194|16293194|16292078|16293194 16293520|16293520|16293520|16293520 TACGCTT 7mer-m8 dme-miR-965-3p X + 16293228 16293309 3'utr caz FlyBase G46789.1 TTTTTTCACTTTTACTTATTAATTGTAGCGAGAGTACGCTTTTAAATGTACTTTTAAAATTAACAGTCAGAGCAACTTTTAA 42 16293269 0.985810615 13 41 341 0.983870968 1.785329835 0.290322581 0.404761905 0.596774194 42 1 0 61 X:16293228-16293309 7 38 5486 FBgn0011571 288.6766667 20.94333333 31.84666667 0.131635163 1.814419863 1.193217501 -7 -7 -7 0.01 dme-miR-1012-3p 6mer3-8 TTGACT X 16293381 16293386 + X_16293381_16293386_+ 0.999996311 0.999996802 0.999996557 3.54E-07 caz FBtr0334992|FBtr0334990|FBtr0334991|FBtr0074217 16292078|16293194|16293194|16293194 16293520|16293520|16293520|16293520 X + 16293365 16293492 3'utr caz FlyBase G61968.1 ACGGTTATCGCTCGTTTTGACTGAATTATATTATATAATTATGTAATCTAATTTAACAACTGTAACTGTAACATGGTACATACGAATAAACATATATATATGTATACATATATAGCTCATATATATGT 37 16293381 0.907989108 18 33 335 0.857142857 1.322219295 0.06122449 0.243243243 0.428571429 37 6 1 42 X:16293365-16293492 6 caz FBtr0334991|FBtr0074217|FBtr0334992|FBtr0334990 16293194|16293194|16292078|16293194 16293520|16293520|16293520|16293520 TTGACT 6mer3-8 dme-miR-1012-3p X + 16293360 16293492 3'utr caz FlyBase G46790.1 CACACACGGTTATCGCTCGTTTTGACTGAATTATATTATATAATTATGTAATCTAATTTAACAACTGTAACTGTAACATGGTACATACGAATAAACATATATATATGTATACATATATAGCTCATATATATGT 32 16293381 0.770261156 16 28 320 0.905660377 1.681241237 0 0.40625 0.641509434 32 5 0 48 X:16293360-16293492 6 20.5 5487 FBgn0011571 288.6766667 20.94333333 31.84666667 0.071013706 0.978831768 0.643709441 0 0 0 0.01 dme-miR-318-3p 6mer3-8 CCCAGT X 16302979 16302984 + X_16302979_16302984_+ 1 1 1 0 CG3632 FBtr0344216 16302932 16303308 X + 16302969 16303007 3'utr CG3632 FlyBase G61999.1 AGCTTTTTAACCCAGTTAGGCTATGTGGATCCTGCTACA 11 16302985 0.763209204 4 11 92 1 1.079181246 0.166666667 0.090909091 0.166666667 11 0 0 12 X:16302969-16303007 6 CG3632 FBtr0344216 16302932 16303308 CCCAGT 6mer3-8 dme-miR-318-3p X + 16302960 16303005 3'utr CG3632 FlyBase G46814.1 CAAACGAAAAGCTTTTTAACCCAGTTAGGCTATGTGGATCCTGCTA 9 16302993 0.974970901 5 9 60 1 1.079181246 0 0.222222222 0.416666667 9 0 0 12 X:16302960-16303005 6 9 5488 FBgn0030735 647.8533333 19.21 29.39333333 0.013892033 0.468505986 0.30619188 -6 -14 -10 0.01 dme-miR-7-5p 6mer3-8 GTCTTC X 16303078 16303083 + X_16303078_16303083_+ 1 1 1 0 CG3632 FBtr0344216 16302932 16303308 X + 16303059 16303096 stop_codon CG3632 FlyBase G62000.1 AGGCGAAGGACGATGAGACGTCTTCTGCGATTTCCTAA 43 16303082 0.93661744 5 42 285 0.980769231 1.707570176 0 0.209302326 0.346153846 43 1 0 51 X:16303059-16303096 6 CG3632 FBtr0344216 16302932 16303308 GTCTTC 6mer3-8 dme-miR-7-5p X + 16303028 16303094 stop_codon CG3632 FlyBase G46815.1 CAGGAGTACGCTGCGGTACCTGCAGAATCCCAGGCGAAGGACGATGAGACGTCTTCTGCGATTTCCT 14 16303082 0.977404326 4 14 90 1 1.414973348 0.153846154 0.571428571 0.769230769 14 0 0 26 X:16303028-16303094 6 27 5489 FBgn0030735 647.8533333 19.21 29.39333333 0.0416761 1.405517959 0.918575641 -4 -4 -4 0.01 dme-miR-965-3p 6mer3-8 TACGCT X 16317729 16317734 - X_16317729_16317734_- 1 1 1 0 Cyp1 FBtr0074238 16317671 16318181 X - 16317690 16317740 3'utr Cyp1 FlyBase G68037.1 ACGTTCTACGCTATGTACCGGAATCGGAATTGTATTTTCGTCTTAATAAAT 20 16317727 0.79133648 6 19 154 0.96 1.380211242 0.16 0.25 0.4 20 1 0 24 X:16317690-16317740 6 Cyp1 FBtr0074238 16317671 16318181 TACGCT 6mer3-8 dme-miR-965-3p X - 16317699 16317741 3'utr Cyp1 FlyBase G51207.1 AACGTTCTACGCTATGTACCGGAATCGGAATTGTATTTTCGTC 7 16317727 0.961598982 4 6 47 0.875 0.84509804 0.25 0.142857143 0.25 7 1 0 7 X:16317699-16317741 6 9.5 5490 FBgn0004432 7157.433333 716.86 1097.683333 0.001327291 0.013252239 0.008654591 -7 -7 -7 0.01 dme-bantam-3p 6mer3-8 TGATCT X 16317820 16317825 - X_16317820_16317825_- 1 1 1 0 Cyp1 FBtr0074238 16317671 16318181 X - 16317798 16317874 3'utr Cyp1 FlyBase G68038.1 AAGAAAAACAATGAGACGACAAGAGTCGAGAGGGGCTTAGAAAAATGTTTGATCTTTTGATGTTGGCTTACTTACTA 37 16317826 0.999985575 10 36 351 0.978723404 1.662757832 0.14893617 0.243243243 0.404255319 37 1 0 46 X:16317798-16317874 6 Cyp1 FBtr0074238 16317671 16318181 TGATCT 6mer3-8 dme-bantam-3p X - 16317802 16317876 3'utr Cyp1 FlyBase G51208.1 AGAAGAAAAACAATGAGACGACAAGAGTCGAGAGGGGCTTAGAAAAATGTTTGATCTTTTGATGTTGGCTTACTT 29 16317819 0.987721101 9 27 250 0.934782609 1.156347201 0.239130435 0.379310345 0.608695652 29 1 2 43 X:16317802-16317876 6 27 5491 FBgn0004432 7157.433333 716.86 1097.683333 0.003772302 0.037664258 0.024597258 1 -6 -2.5 0.01 dme-miR-277-3p 7mer-m8 TGCATTT X 16318110 16318116 - X_16318110_16318116_- 0.620204266 0.620204266 0.620204266 0 Cyp1 FBtr0074238 16317671 16318181 X - 16318100 16318162 3'utr Cyp1 FlyBase G68041.1 AACAGCAACATTGCAAGAAGAAAAATCTGTTAAGACGAAAACCATTTGCATTTTCTCCAAAAC 26 16318117 0.850893062 8 24 139 0.9375 1.477121255 0.125 0.192307692 0.34375 26 2 0 30 X:16318100-16318162 7 Cyp1 FBtr0074238 16317671 16318181 TGCATTT 7mer-m8 dme-miR-277-3p X - 16318100 16318159 3'utr Cyp1 FlyBase G51210.1 AGCAACATTGCAAGAAGAAAAATCTGTTAAGACGAAAACCATTTGCATTTTCTCCAAAAC 19 16318116 0.80387963 8 18 109 0.958333333 1.361727836 0.041666667 0.263157895 0.416666667 19 1 0 23 X:16318100-16318159 7 15 5492 FBgn0004432 7157.433333 716.86 1097.683333 0.002095723 0.020924588 0.013665143 1 0 0.5 0.01 dme-miR-184-5p 6mer3-8 TGATAA X 16321441 16321446 - X_16321441_16321446_- 1 1 1 0 CG9917 FBtr0331756|FBtr0074237 16321429|16321429 16322047|16322047 X - 16321430 16321464 3'utr CG9917 FlyBase G68047.1 ATTATTGTAATAATAAAGTGATAAATGTAAAAAGA 20 16321452 0.759737074 6 17 145 0.869565217 1 0.043478261 0.15 0.260869565 20 2 1 20 X:16321430-16321464 6 CG9917 FBtr0331756|FBtr0074237 16321429|16321429 16322047|16322047 TGATAA 6mer3-8 dme-miR-184-5p X - 16321433 16321462 3'utr CG9917 FlyBase G51218.1 TATTGTAATAATAAAGTGATAAATGTAAAA 14 16321452 0.713158982 7 13 87 0.952380952 1.301029996 0 0.357142857 0.571428571 14 1 0 20 X:16321433-16321462 6 16 5493 FBgn0030740 1612.983333 110.1633333 169.58 0.009919507 0.145238888 0.094350749 6 6 6 0.01 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT X 16321797 16321803 - X_16321797_16321803_- 0.620204031 0.620204031 0.620204031 0 CG9917 FBtr0331756|FBtr0074237 16321429|16321429 16322047|16322047 X - 16321741 16321830 3'utr CG9917 FlyBase G68048.3 AGGCTAGCCAGCCATATCGTTTTTGTTTGGTGCTTCTAATTTATGTAATTAATTGCCAATTGATGTATGTATGTATGTAGTATTGTAAAC 48 16321804 0.81168328 13 47 592 1 1.770852012 0.169491525 0.166666667 0.322033898 48 0 0 59 X:16321741-16321830 7 CG9917 FBtr0331756|FBtr0074237 16321429|16321429 16322047|16322047 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" X - 16321655 16321831 3'utr CG9917 FlyBase G51220.1 CAGGCTAGCCAGCCATATCGTTTTTGTTTGGTGCTTCTAATTTATGTAATTAATTGCCAATTGATGTATGTATGTATGTAGTATTGTAAACAATGCTTATACTTCCTTCTAGTTTTACTTCTGAATCAGAAATTCTTCTGGCCTTTGTCATGCGTTTATCTAATGCTTTATTTCCGT 49 16321804 0.994765471 14 43 591 0.926470588 1.799340549 0.235294118 0.285714286 0.485294118 49 5 0 63 X:16321655-16321831 7 35.5 5494 FBgn0030740 1612.983333 110.1633333 169.58 0.022008907 0.322248782 0.209340724 1 1 1 0.01 dme-miR-1012-3p 6mer3-8 TTGACT X 16321979 16321984 - X_16321979_16321984_- 0.998765523 0.999766135 0.999265829 0.000707531 CG9917 FBtr0331756|FBtr0074237 16321429|16321429 16322047|16322047 X - 16321963 16322023 3'utr CG9917 FlyBase G68050.1 TATCTCGAATCCGAATCTGTAAAACGCCTTCTCAACGCTTTGACTTTGGCATTCCAAAGCG 12 16321984 0.979003954 7 11 79 0.928571429 1.113943352 0.142857143 0.166666667 0.285714286 12 1 0 13 X:16321963-16322023 6 CG9917 FBtr0331756|FBtr0074237 16321429|16321429 16322047|16322047 TTGACT 6mer3-8 dme-miR-1012-3p X - 16321962 16322001 3'utr CG9917 FlyBase G51222.1 AACGCCTTCTCAACGCTTTGACTTTGGCATTCCAAAGCGA 10 16321982 0.711417124 5 10 73 1 1.146128036 0.285714286 0.4 0.571428571 10 0 0 14 X:16321962-16322001 6 9 5495 FBgn0030740 1612.983333 110.1633333 169.58 0.005579723 0.081696874 0.053072296 0 -2 -1 0.01 dme-miR-980-3p 6mer2-7 GCAGCT X 16328154 16328159 + X_16328154_16328159_+ 0.999533189 0.999998316 0.999765753 0.000328875 CalpC FBtr0074226 16328052 16328523 X + 16328136 16328187 3'utr CalpC FlyBase G62011.1 GACGACGACGACGATGATGCAGCTGATGTTGATGATGCTGATCTGCCAATCA 20 16328168 0.97514666 4 20 132 1 1.322219295 0.238095238 0.05 0.095238095 20 0 0 21 X:16328136-16328187 6 CalpC FBtr0074226 16328052 16328523 GCAGCT 6mer2-7 dme-miR-980-3p X + 16328136 16328191 3'utr CalpC FlyBase G46826.1 GACGACGACGACGATGATGCAGCTGATGTTGATGATGCTGATCTGCCAATCAAAAA 15 16328169 0.974332217 4 14 89 0.947368421 1.255272505 0.263157895 0.266666667 0.421052632 15 1 0 18 X:16328136-16328191 6 13.5 5496 FBgn0260450 208 9.383333333 14.38333333 0.064903846 1.438721137 0.938586327 -14 -15 -14.5 0.01 dme-miR-968-5p 6mer3-8 ACTACT X 16328437 16328442 + X_16328437_16328442_+ 1 1 1 0 CalpC FBtr0074226 16328052 16328523 X + 16328386 16328450 3'utr CalpC FlyBase G62012.1 AATATATATAGAATCGAGCGAAATGGCCAATGCGATTGCAGACTTTTATGTACTACTGAGAATTT 130 16328434 0.985219418 7 130 1056 1 2.190331698 0.458064516 0.161538462 0.296774194 130 0 0 155 X:16328386-16328450 6 CalpC FBtr0074226 16328052 16328523 ACTACT 6mer3-8 dme-miR-968-5p X + 16328414 16328457 3'utr CalpC FlyBase G46827.1 AATGCGATTGCAGACTTTTATGTACTACTGAGAATTTTTATTAT 85 16328434 0.698210974 4 85 675 1 2.127104798 0.485074627 0.435294118 0.641791045 85 0 0 134 X:16328414-16328457 6 106.5 5497 FBgn0260450 208 9.383333333 14.38333333 0.512019231 11.34991119 7.404403244 3 3 3 0.01 dme-miR-12-5p 7mer-m8 AATACTC X 16337819 16337825 + X_16337819_16337825_+ 0.67451515 0.67451515 0.67451515 0 Dsp1 FBtr0089259|FBtr0289960|FBtr0089263|FBtr0339766|FBtr0089261|FBtr0089262|FBtr0089260 16337806|16337806|16337806|16337806|16337806|16337806|16337806 16340443|16338771|16340624|16338884|16340443|16338771|16340443 X + 16337768 16337894 stop_codon Dsp1 FlyBase G62025.1 CGACGACGACGGCGATGGAGATGATGACGAGAACCAATAGGTTTAGCAGTAAATACTCTTCACTATTTATACACACGATCGTTGTCGCGATGGAGGAAAGAAACATGATAACGTTGGTTGATCTATT 51 16337821 0.977751035 17 46 313 0.915254237 1.431363764 0.220338983 0.137254902 0.254237288 51 4 1 54 X:16337768-16337894 7 Dsp1 FBtr0089261|FBtr0089262|FBtr0089260|FBtr0089259|FBtr0289960|FBtr0089263|FBtr0339766 16337806|16337806|16337806|16337806|16337806|16337806|16337806 16340443|16338771|16340443|16340443|16338771|16340624|16338884 AATACTC 7mer-m8 dme-miR-12-5p X + 16337765 16337894 stop_codon Dsp1 FlyBase G46837.1 CGACGACGACGACGGCGATGGAGATGATGACGAGAACCAATAGGTTTAGCAGTAAATACTCTTCACTATTTATACACACGATCGTTGTCGCGATGGAGGAAAGAAACATGATAACGTTGGTTGATCTATT 23 16337821 0.974605725 10 22 138 0.947368421 1.556302501 0.131578947 0.52173913 0.710526316 23 2 0 36 X:16337765-16337894 7 13.5 5498 FBgn0011764 2716.763333 96.47 148.13 0.004969148 0.139939878 0.091136164 -2 -2 -2 0.01 dme-miR-305-3p 6mer2-7 TGTGCC X 16337942 16337947 + X_16337942_16337947_+ 1 1 1 0 Dsp1 FBtr0089259|FBtr0289960|FBtr0089263|FBtr0339766|FBtr0089261|FBtr0089262|FBtr0089260 16337806|16337806|16337806|16337806|16337806|16337806|16337806 16340443|16338771|16340624|16338884|16340443|16338771|16340443 X + 16337935 16337973 5'utr Dsp1 FlyBase G62026.1 ATAAGGGTGTGCCCGCTTTAGAGGTTTCGCTTTCCGGTA 11 16337951 0.881112217 3 9 110 0.857142857 1.079181246 0 0.272727273 0.428571429 11 2 0 12 X:16337935-16337973 6 Dsp1 FBtr0089261|FBtr0089262|FBtr0089260|FBtr0089259|FBtr0289960|FBtr0089263|FBtr0339766 16337806|16337806|16337806|16337806|16337806|16337806|16337806 16340443|16338771|16340443|16340443|16338771|16340624|16338884 TGTGCC 6mer2-7 dme-miR-305-3p X + 16337895 16337973 5'utr Dsp1 FlyBase G46838.1 ATCAGGTTGGCCAATGTGTGTTGAATATAAATTTATATATATAAGGGTGTGCCCGCTTTAGAGGTTTCGCTTTCCGGTA 10 16337950 0.992114475 6 8 94 0.785714286 0.740362689 0.428571429 0.3 0.5 10 2 1 11 X:16337895-16337973 6 6.5 5499 FBgn0011764 2716.763333 96.47 148.13 0.002392553 0.06737846 0.043880375 -9 -8 -8.5 0.01 dme-miR-276a-3p 7mer-A1 GTTCCTA X 16338315 16338321 + X_16338315_16338321_+ 0.823349562 0.823349562 0.823349562 0 Dsp1 FBtr0089259|FBtr0289960|FBtr0089263|FBtr0339766|FBtr0089261|FBtr0089262|FBtr0089260 16337806|16337806|16337806|16337806|16337806|16337806|16337806 16340443|16338771|16340624|16338884|16340443|16338771|16340443 X + 16338295 16338326 5'utr Dsp1 FlyBase G62027.1 CGAAGAGAAGAGAAACCATTGTTCCTAGTGCA 22 16338314 0.961808214 4 22 109 1 1.397940009 0.48 0.136363636 0.24 22 0 0 25 X:16338295-16338326 7 Dsp1 FBtr0089261|FBtr0089262|FBtr0089260|FBtr0089259|FBtr0289960|FBtr0089263|FBtr0339766 16337806|16337806|16337806|16337806|16337806|16337806|16337806 16340443|16338771|16340443|16340443|16338771|16340624|16338884 GTTCCTA 7mer-A1 dme-miR-276a-3p X + 16338296 16338334 5'utr Dsp1 FlyBase G46839.1 GAAGAGAAGAGAAACCATTGTTCCTAGTGCATTTCGAAA 9 16338313 0.963563413 3 9 48 1 1.113943352 0.307692308 0.444444444 0.615384615 9 0 0 13 X:16338296-16338334 7 15.5 5500 FBgn0011764 2716.763333 96.47 148.13 0.005705318 0.160671711 0.104637818 1 2 1.5 0.01 dme-miR-308-3p 8mer-m1 CTGTGATT X 16338431 16338438 + X_16338431_16338438_+ 0.385560619 0.385560641 0.38556063 0 Dsp1 FBtr0089259|FBtr0289960|FBtr0089263|FBtr0339766|FBtr0089261|FBtr0089262|FBtr0089260 16337806|16337806|16337806|16337806|16337806|16337806|16337806 16340443|16338771|16340624|16338884|16340443|16338771|16340443 X + 16338395 16338560 5'utr Dsp1 FlyBase G62028.1 CATGCCAGCCGTGGGCAAAATGTCTGCAGAAGATTTCTGTGATTGGAAAAACCAAAGCATAAATTGTTTTGATTTATTTTTTTTTCTGTGACAATTTGATGATTACCTGGAAGTGGAATCTCTAAGAAAATCACCTATTATGTATATGTAAATGCATATATATAAA 84 16338438 0.982676794 15 81 601 0.96969697 1.681241237 0.191919192 0.142857143 0.272727273 84 2 1 96 X:16338395-16338560 8 Dsp1 FBtr0089261|FBtr0089262|FBtr0089260|FBtr0089259|FBtr0289960|FBtr0089263|FBtr0339766 16337806|16337806|16337806|16337806|16337806|16337806|16337806 16340443|16338771|16340443|16340443|16338771|16340624|16338884 CTGTGATT 8mer-m1 dme-miR-308-3p X + 16338406 16338448 5'utr Dsp1 FlyBase G46840.1 TGGGCAAAATGTCTGCAGAAGATTTCTGTGATTGGAAAAACCA 40 16338430 0.774525548 4 39 293 0.950819672 1.763427994 0.163934426 0.375 0.590163934 40 3 0 58 X:16338406-16338448 8 52.5 5501 FBgn0011764 2716.763333 96.47 148.13 0.019324466 0.544210635 0.354418416 -7 1 -3 0.01 dme-miR-986-5p 6mer2-7 TTCGAG X 16338898 16338903 + X_16338898_16338903_+ 0.999999605 0.999999536 0.999999571 7.07E-08 Dsp1 FBtr0089259|FBtr0089263|FBtr0089261|FBtr0089260 16337806|16337806|16337806|16337806 16340443|16340624|16340443|16340443 X + 16338887 16338990 3'utr Dsp1 FlyBase G62029.1 CAATTAATGCGTTCGAGTTTATATGTTCCCTCCCACACACGAAACAAACTCAATGAAACGTGATAATGTGAAAAATACTTAACTCAGTGGCGGGTGATATCTCG 524 16338912 0.739173422 14 519 3770 0.992836676 2.238673243 0.032951289 0.25 0.436962751 524 2 3 693 X:16338887-16338990 6 Dsp1 FBtr0089261|FBtr0089260|FBtr0089259|FBtr0089263 16337806|16337806|16337806|16337806 16340443|16340443|16340443|16340624 TTCGAG 6mer2-7 dme-miR-986-5p X + 16338889 16338988 3'utr Dsp1 FlyBase G46845.1 ATTAATGCGTTCGAGTTTATATGTTCCCTCCCACACACGAAACAAACTCAATGAAACGTGATAATGTGAAAAATACTTAACTCAGTGGCGGGTGATATCT 425 16338912 0.912880629 13 425 3025 1 2.788875116 0.030894309 0.291764706 0.510569106 425 0 0 615 X:16338889-16338988 6 386.5 5502 FBgn0011764 2716.763333 96.47 148.13 0.142264876 4.006426868 2.609194626 -14 -14 -14 0.01 dme-miR-277-3p 7mer-m8 TGCATTT X 16339066 16339072 + X_16339066_16339072_+ 0.620204266 0.620204266 0.620204266 0 Dsp1 FBtr0089259|FBtr0089263|FBtr0089261|FBtr0089260 16337806|16337806|16337806|16337806 16340443|16340624|16340443|16340443 X + 16338999 16339142 3'utr Dsp1 FlyBase G62030.1 ATTTTTTGCCGCTCACACACACAGTACCATATATCCATATATAATATCCCCCCGCAAAAAAACAAAATGCATTTCATTCAACTTACACTTACATTTACATTAATTCAGTTTGCGATTCGTGAATCCCCCAGATCCTTGGAGATA 27 16339081 0.962007769 13 25 171 0.941176471 1.505149978 0.088235294 0.222222222 0.382352941 27 2 0 32 X:16338999-16339142 7 Dsp1 FBtr0089261|FBtr0089260|FBtr0089259|FBtr0089263 16337806|16337806|16337806|16337806 16340443|16340443|16340443|16340624 TGCATTT 7mer-m8 dme-miR-277-3p X + 16339069 16339146 3'utr Dsp1 FlyBase G46846.1 ATTTCATTCAACTTACACTTACATTTACATTAATTCAGTTTGCGATTCGTGAATCCCCCAGATCCTTGGAGATAATTG 18 16339081 0.778799204 6 17 124 0.954545455 1.322219295 0.136363636 0.222222222 0.363636364 18 1 0 21 X:16339069-16339146 3 3 5503 FBgn0011764 2716.763333 96.47 148.13 0.001104255 0.031097751 0.020252481 -15 -15 -15 0.01 dme-miR-2a-2-5p 7mer-A1 GATGAGA X 16339340 16339346 + X_16339340_16339346_+ 0.782911824 0.782911824 0.782911824 0 Dsp1 FBtr0089259|FBtr0089263|FBtr0089261|FBtr0089260 16337806|16337806|16337806|16337806 16340443|16340624|16340443|16340443 X + 16339190 16339521 3'utr Dsp1 FlyBase G62031.1 AGCCACGATCATAAGATACGGAAAGTTAGTCTTGGTTGGTTCGGTGCGCTTCGTGATGAGGTGGGAAGCAACCGCAACGCTGTCGTCGGACATTGCAACAATTGTTGTTGACTTGGCTGGCCATGTATATACTATTTGAAGTATTATTTAGATGAGACTACGTAGAAATTAACAAGAATCGAGAGCAAATAACGACATCATACAAGCCTAATATTAGAGTAGATTTCAGCGGGCCTGCAAAGTAATGTAAATTGCGTAGAAACCTTGAATATATTGTAGACTAGTTTTTTGAGGACTAGTATTGCCCAAAATGTTCCAGGCACAGAAACAGA 333 16339342 0.980574246 46 322 2376 0.971279373 2.57054294 0.224543081 0.138138138 0.250652742 333 11 0 372 X:16339190-16339521 7 Dsp1 FBtr0089261|FBtr0089260|FBtr0089259|FBtr0089263 16337806|16337806|16337806|16337806 16340443|16340443|16340443|16340624 GATGAGA 7mer-A1 dme-miR-2a-2-5p X + 16339276 16339442 3'utr Dsp1 FlyBase G46848.1 CGGACATTGCAACAATTGTTGTTGACTTGGCTGGCCATGTATATACTATTTGAAGTATTATTTAGATGAGACTACGTAGAAATTAACAAGAATCGAGAGCAAATAACGACATCATACAAGCCTAATATTAGAGTAGATTTCAGCGGGCCTGCAAAGTAATGTAAATT 167 16339342 0.978834893 22 159 1207 0.953846154 2.394451681 0.207692308 0.407185629 0.619230769 167 12 0 248 X:16339276-16339442 7 182.5 5504 FBgn0011764 2716.763333 96.47 148.13 0.067175524 1.891779828 1.232025923 -2 -2 -2 0.01 dme-miR-276a-3p 6mer3-8 AGTTCC X 16340026 16340031 + X_16340026_16340031_+ 1 1 1 0 Dsp1 FBtr0089259|FBtr0089263|FBtr0089261|FBtr0089260 16337806|16337806|16337806|16337806 16340443|16340624|16340443|16340443 X + 16339970 16340096 3'utr Dsp1 FlyBase G62034.2 CTACAATTCGACGGTAATCCATCCCCTCTATATTAATAAATTACTATGAAAATTCCAGTTCCCTGTGCGCTTTGTTATAAGAACTAAACTATTATGAAATAAACTTTTAGAAATGAGATTCTTATTA 116 16340034 0.79397151 22 112 924 0.973856209 1.696065014 0.052287582 0.25862069 0.437908497 116 2 2 149 X:16339970-16340096 6 Dsp1 FBtr0089261|FBtr0089260|FBtr0089259|FBtr0089263 16337806|16337806|16337806|16337806 16340443|16340443|16340443|16340624 AGTTCC 6mer3-8 dme-miR-276a-3p X + 16340012 16340059 3'utr Dsp1 FlyBase G46853.1 ACTATGAAAATTCCAGTTCCCTGTGCGCTTTGTTATAAGAACTAAACT 64 16340042 0.601572389 7 59 519 0.942307692 1.514104821 0.115384615 0.46875 0.673076923 64 4 2 98 X:16340012-16340059 6 71 5505 FBgn0011764 2716.763333 96.47 148.13 0.026134039 0.735980097 0.479308715 -8 -16 -12 0.01 dme-miR-965-3p 7mer-m8 TACGCTT X 16340176 16340182 + X_16340176_16340182_+ 0.620204855 0.620204855 0.620204855 0 Dsp1 FBtr0089259|FBtr0089263|FBtr0089261|FBtr0089260 16337806|16337806|16337806|16337806 16340443|16340624|16340443|16340443 X + 16340121 16340198 3'utr Dsp1 FlyBase G62035.1 GATGATGAATGATGTGTTCTTCAAAACCATTTGTCTTAAATCTTAATTTTTGATTTACGCTTGGTACATACGTAATAG 10 16340175 0.985029416 5 10 100 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 X:16340121-16340198 7 Dsp1 FBtr0089261|FBtr0089260|FBtr0089259|FBtr0089263 16337806|16337806|16337806|16337806 16340443|16340443|16340443|16340624 TACGCTT 7mer-m8 dme-miR-965-3p X + 16340165 16340196 3'utr Dsp1 FlyBase G46855.1 AATTTTTGATTTACGCTTGGTACATACGTAAT 8 16340175 0.775072616 4 7 63 0.75 0.954242509 0 0.375 0.583333333 8 3 0 9 X:16340165-16340196 7 7.5 5506 FBgn0011764 2716.763333 96.47 148.13 0.002760638 0.077744376 0.050631202 1 1 1 0.01 dme-miR-79-3p 7mer-m8 TAGCTTT X 16340244 16340250 + X_16340244_16340250_+ 0.620204031 0.620203739 0.620203885 2.12E-07 Dsp1 FBtr0089259|FBtr0089263|FBtr0089261|FBtr0089260 16337806|16337806|16337806|16337806 16340443|16340624|16340443|16340443 X + 16340212 16340273 3'utr Dsp1 FlyBase G62036.1 ATGTTGTTACAAATCCCAATAATGAACAGCTTTAGCTTTTATATTTGATAGACAACAACACT 35 16340243 0.982887649 6 32 332 0.921052632 1.544068044 0.105263158 0.085714286 0.157894737 35 3 0 35 X:16340212-16340273 7 Dsp1 FBtr0089261|FBtr0089260|FBtr0089259|FBtr0089263 16337806|16337806|16337806|16337806 16340443|16340443|16340443|16340624 TAGCTTT 7mer-m8 dme-miR-79-3p X + 16340212 16340265 3'utr Dsp1 FlyBase G46856.1 ATGTTGTTACAAATCCCAATAATGAACAGCTTTAGCTTTTATATTTGATAGACA 19 16340243 0.758336317 5 18 174 0.964285714 1.431363764 0 0.368421053 0.571428571 19 1 0 27 X:16340212-16340265 7 25 5507 FBgn0011764 2716.763333 96.47 148.13 0.009202127 0.259147922 0.168770674 1 1 1 0.01 dme-miR-980-5p 7mer-m1 AAAAACT X 16340301 16340307 + X_16340301_16340307_+ 0.765586663 0.765586663 0.765586663 0 Dsp1 FBtr0089259|FBtr0089263|FBtr0089261|FBtr0089260 16337806|16337806|16337806|16337806 16340443|16340624|16340443|16340443 X + 16340299 16340344 3'utr Dsp1 FlyBase G62037.1 CTAAAAACTTACAATGTGTGAATTACATTAGCAATACTATAGTAGT 18 16340313 0.730116032 5 17 133 0.95 1.278753601 0 0.111111111 0.2 18 1 0 19 X:16340299-16340344 7 Dsp1 FBtr0089261|FBtr0089260|FBtr0089259|FBtr0089263 16337806|16337806|16337806|16337806 16340443|16340443|16340443|16340624 AAAAACT 7mer-m1 dme-miR-980-5p X + 16340300 16340337 3'utr Dsp1 FlyBase G46857.1 TAAAAACTTACAATGTGTGAATTACATTAGCAATACTA 15 16340313 0.770208343 5 15 104 1 1.342422681 0 0.466666667 0.636363636 15 0 0 22 X:16340300-16340337 7 12 5508 FBgn0011764 2716.763333 96.47 148.13 0.004417021 0.124391002 0.081009924 -12 -12 -12 0.01 dme-miR-970-3p 8mer-A1 TCTTATGA X 16340459 16340466 + X_16340459_16340466_+ 0.630790218 0.630790218 0.630790218 0 Dsp1 FBtr0089263 16337806 16340624 X + 16340448 16340560 3'utr Dsp1 FlyBase G62038.1 CAGAGAAAAATTCTTATGAGTTGTTTTGCGTATGTACTACAAGTGGTACTGATGTGTGCCAAAATGGTTTTCAGGGGCATATTATATTACATTAGATGAATTCGTCCGAAATT 26 16340480 0.986621664 6 25 212 0.96875 1.190331698 0.5625 0.192307692 0.34375 26 0 1 31 X:16340448-16340560 8 Dsp1 FBtr0089263 16337806 16340624 TCTTATGA 8mer-A1 dme-miR-970-3p X + 16340448 16340506 3'utr Dsp1 FlyBase G46858.1 CAGAGAAAAATTCTTATGAGTTGTTTTGCGTATGTACTACAAGTGGTACTGATGTGTGC 19 16340458 0.960758437 4 19 143 1 1.431363764 0.666666667 0.315789474 0.518518519 19 0 0 27 X:16340448-16340506 8 11 5509 FBgn0011764 2716.763333 96.47 148.13 0.004048936 0.114025086 0.074259097 -21 1 -10 0.01 dme-miR-2b-2-5p 7mer-A1 TGAAGAA X 16355476 16355482 + X_16355476_16355482_+ 0.823349562 0.823349509 0.823349536 7.07E-08 sl FBtr0074230 16354785 16356482 X + 16355448 16355498 3'utr sl FlyBase G62050.1 TATTACAATCTTCTTAAAGACTTTTAACTGAAGAAAATAGACCACTTTCAT 8 16355471 0.990897573 4 8 59 1 0.954242509 0 0.125 0.222222222 8 0 0 9 X:16355448-16355498 7 sl FBtr0074230 16354785 16356482 TGAAGAA 7mer-A1 dme-miR-2b-2-5p X + 16355448 16355484 3'utr sl FlyBase G46866.1 TATTACAATCTTCTTAAAGACTTTTAACTGAAGAAAA 10 16355471 0.726922264 2 9 72 1 1.113943352 0.153846154 0.3 0.461538462 10 0 0 13 X:16355448-16355484 7 6.5 5510 FBgn0003416 535.48 11.35 17.39333333 0.012138642 0.572687225 0.373706401 5 5 5 0.01 dme-miR-13b-2-5p 7mer-m8 TTTGACG X 16367055 16367061 + X_16367055_16367061_+ 0.659000274 0.659000274 0.659000274 0 nonA FBtr0340313|FBtr0074232|FBtr0100586 16367010|16367010|16365743 16371525|16368526|16368526 X + 16367036 16367074 5'utr nonA FlyBase G62065.1 CATACATATAAGGATGAGATTTGACGTACTCTCAAATAT 15 16367056 0.694216999 4 15 94 1 1.301029996 0.05 0.333333333 0.5 15 0 0 20 X:16367036-16367074 7 nonA FBtr0340313|FBtr0074232|FBtr0100586 16367010|16367010|16365743 16371525|16368526|16368526 TTTGACG 7mer-m8 dme-miR-13b-2-5p X + 16367000 16367072 stop_codon nonA FlyBase G46876.1 CGACGTTTTTAGACACTGGATCGATCGAACAATATACATACATATAAGGATGAGATTTGACGTACTCTCAAAT 8 16367056 0.969108838 6 8 44 1 1.041392685 0.181818182 0.375 0.545454545 8 0 0 11 X:16367000-16367072 7 10 5511 FBgn0004227 554.3866667 22.83 35.39333333 0.018037952 0.438020149 0.282539085 -1 -1 -1 0.01 dme-bantam-3p 6mer3-8 TGATCT X 16367570 16367575 + X_16367570_16367575_+ 0.999999492 1 0.999999746 3.54E-07 nonA FBtr0340313|FBtr0074232|FBtr0100586 16367010|16367010|16365743 16371525|16368526|16368526 X + 16367532 16367591 5'utr nonA FlyBase G62067.1 CGAGAATCTGGTGAGTATTCCGGATGAGCGCATGGACTTGATCTGGATCTTGGTCTGGAT 8 16367564 0.969609572 5 8 52 1 1 0.2 0.25 0.4 8 0 0 10 X:16367532-16367591 6 nonA FBtr0340313|FBtr0074232|FBtr0100586 16367010|16367010|16365743 16371525|16368526|16368526 TGATCT 6mer3-8 dme-bantam-3p X + 16367536 16367589 5'utr nonA FlyBase G46877.1 AATCTGGTGAGTATTCCGGATGAGCGCATGGACTTGATCTGGATCTTGGTCTGG 6 16367564 0.978895365 2 5 40 1 0.77815125 0.333333333 0 0 6 0 0 6 X:16367536-16367589 6 5 5512 FBgn0004227 554.3866667 22.83 35.39333333 0.009018976 0.219010074 0.141269542 6 6 6 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT X 16378190 16378196 + X_16378190_16378196_+ 0.658999527 0.658999527 0.658999527 0 Fur2 FBtr0301300 16377374 16381545 X + 16378168 16378202 3'utr Fur2 FlyBase G62083.1 CAGCCGGGCATCCTGTCCAAGTGGCAGCTGATATT 7 16378189 0.822002147 4 7 32 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 X:16378168-16378202 7 Fur2 FBtr0301300 16377374 16381545 GGCAGCT 7mer-m8 dme-miR-980-3p X + 16378165 16378201 3'utr Fur2 FlyBase G46886.1 AATCAGCCGGGCATCCTGTCCAAGTGGCAGCTGATAT 5 16378189 0.955258602 2 5 23 1 0.954242509 0 0.6 0.777777778 5 0 0 9 X:16378165-16378201 7 5.5 5513 FBgn0004598 1868.423333 38.93666667 59.46333333 0.002943658 0.14125503 0.092493974 1 1 1 0.01 dme-bantam-3p 6mer2-7 GATCTC X 16378849 16378854 + X_16378849_16378854_+ 1 1 1 0 Fur2 FBtr0301300 16377374 16381545 X + 16378762 16378892 3'utr Fur2 FlyBase G62085.1 TGGCCCTGTCACGACACCTGCGAAACGTGCGCCGGTGCCGGACCCGACAGCTGCCTCACATGTGCTCCGGCCCACCTGCACGTCATCGATCTCGCCGTCTGCCTGCAATTCTGCCCGGACGGATATTTTGA 110 16378847 0.970546132 15 105 603 0.959349593 2.071882007 0.284552846 0.109090909 0.203252033 110 5 0 118 X:16378762-16378892 6 Fur2 FBtr0301300 16377374 16381545 GATCTC 6mer2-7 dme-bantam-3p X + 16378809 16378891 3'utr Fur2 FlyBase G46888.1 CAGCTGCCTCACATGTGCTCCGGCCCACCTGCACGTCATCGATCTCGCCGTCTGCCTGCAATTCTGCCCGGACGGATATTTTG 56 16378846 0.943741831 12 53 310 0.946808511 1.949390007 0.393617021 0.392857143 0.638297872 56 5 0 89 X:16378809-16378891 6 64.5 5514 FBgn0004598 1868.423333 38.93666667 59.46333333 0.034521085 1.656536255 1.084702057 2 3 2.5 0.01 dme-miR-1008-3p 8mer-A1 AGCTGTGA X 16379038 16379045 + X_16379038_16379045_+ 0.643565468 0.469378261 0.556471865 0.12316895 Fur2 FBtr0301300 16377374 16381545 X + 16378985 16379052 3'utr Fur2 FlyBase G62086.1 TTCCCTGCGAGCCCAACTGTGCCTCATGCCAGGACCATCCCGAGTACTGCACTAGCTGTGATCACCAT 15 16379037 0.966416038 7 13 70 0.933333333 0.84509804 0 0 0 15 0 1 14 X:16378985-16379052 8 Fur2 FBtr0301300 16377374 16381545 AGCTGTGA 8mer-A1 dme-miR-1008-3p X + 16379021 16379058 3'utr Fur2 FlyBase G46889.1 ATCCCGAGTACTGCACTAGCTGTGATCACCATTTGGTT 14 16379037 0.781898946 6 14 90 1 1.301029996 0.1 0.428571429 0.6 14 0 0 20 X:16379021-16379058 8 12.5 5515 FBgn0004598 1868.423333 38.93666667 59.46333333 0.006690133 0.321034158 0.210213577 1 1 1 0.01 dme-miR-184-5p 6mer3-8 TGATAA X 16380973 16380978 + X_16380973_16380978_+ 1 1 1 0 Fur2 FBtr0301300 16377374 16381545 X + 16380943 16381015 3'utr Fur2 FlyBase G62093.1 TAACATTGGCGAGGACGATGATACAGATGGTGATAATTCCGATGACGAGTTGGACGGCAACGTGGGCACAGAT 29 16380970 0.703454166 9 24 148 0.794117647 1.431363764 0.205882353 0.178571429 0.323529412 28 7 0 27 X:16380943-16381015 6 Fur2 FBtr0301300 16377374 16381545 TGATAA 6mer3-8 dme-miR-184-5p X + 16380942 16380990 3'utr Fur2 FlyBase G46892.1 TTAACATTGGCGAGGACGATGATACAGATGGTGATAATTCCGATGACGA 9 16380970 0.740560533 4 7 50 0.818181818 0.653212514 0.272727273 0.111111111 0.272727273 9 1 1 9 X:16380942-16380990 6 12.5 5516 FBgn0004598 1868.423333 38.93666667 59.46333333 0.006690133 0.321034158 0.210213577 3 3 3 0.01 dme-miR-283-5p 7mer-m8 TGATATT X 16381087 16381093 + X_16381087_16381093_+ 0.620203677 0.620203677 0.620203677 0 Fur2 FBtr0301300 16377374 16381545 X + 16381043 16381128 3'utr Fur2 FlyBase G62094.1 AAAGGCAATGATCATGGACACGAATTTTACATTGAGAGTACAAATGATATTGATGCGATCGAGTTTCACTGCAATGGAGCCGGAGC 15 16381090 0.972624085 8 14 79 0.944444444 1.230448921 0.222222222 0.133333333 0.277777778 15 1 0 17 X:16381043-16381128 7 Fur2 FBtr0301300 16377374 16381545 TGATATT 7mer-m8 dme-miR-283-5p X + 16381043 16381097 3'utr Fur2 FlyBase G46893.1 AAAGGCAATGATCATGGACACGAATTTTACATTGAGAGTACAAATGATATTGATG 7 16381057 0.972514894 2 7 33 1 0.954242509 0.444444444 0.285714286 0.444444444 7 0 0 9 X:16381043-16381097 7 6 5517 FBgn0004598 1868.423333 38.93666667 59.46333333 0.003211264 0.154096396 0.100902517 -3 30 13.5 0.01 dme-miR-8-3p 7mer-A1 AGTATTA X 16382126 16382132 - X_16382126_16382132_- 0.823349562 0.823349562 0.823349562 0 CG9992 FBtr0074309|FBtr0074310|FBtr0074307|FBtr0074306|FBtr0074308 16381952|16381952|16381952|16381952|16381952 16382257|16382257|16382257|16382257|16382257 X - 16382091 16382181 3'utr CG9992 FlyBase G68076.1 GATTTTGTATACTTAGCGTACGCAGCTAAATAGGACAGAAGAAGACATAAGTATTAACGAATTTCTAATGATTTACAAGGAAAAACTAACA 17 16382151 0.862998463 8 14 90 0.777777778 0.669006781 0.111111111 0.058823529 0.111111111 17 2 2 14 X:16382091-16382181 7 CG9992 FBtr0074306|FBtr0074308|FBtr0074310|FBtr0074307|FBtr0074309 16381952|16381952|16381952|16381952|16381952 16382257|16382257|16382257|16382257|16382257 AGTATTA 7mer-A1 dme-miR-8-3p X - 16382103 16382173 3'utr CG9992 FlyBase G51244.1 ATACTTAGCGTACGCAGCTAAATAGGACAGAAGAAGACATAAGTATTAACGAATTTCTAATGATTTACAAG 14 16382134 0.967241802 6 11 67 0.894736842 0.929418926 0.105263158 0.214285714 0.421052632 14 1 1 17 X:16382103-16382173 7 8 5518 FBgn0030744 1109.82 99.53333333 152.75 0.007208376 0.080375084 0.052373159 19 2 10.5 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA X 16388000 16388007 + X_16388000_16388007_+ 0.500120318 0.500120318 0.500120318 0 CG4239 FBtr0340314|FBtr0074268|FBtr0074270|FBtr0074269 16387959|16387959|16387959|16387959 16388702|16388702|16388702|16388702 X + 16387950 16388035 stop_codon CG4239 FlyBase G62102.1 AGAGCAACTAAAACTATTTGTAGTCAGCCCCATCTTCCCCCGGACAAATAGTACTTAACGCTGCCAGCCAAAGCTAACGCCTAAAA 39 16387998 0.958284295 8 35 168 0.925 1.568201724 0.15 0.025641026 0.05 39 3 0 37 X:16387950-16388035 8 CG4239 FBtr0074270|FBtr0074269|FBtr0340314|FBtr0074268 16387959|16387959|16387959|16387959 16388702|16388702|16388702|16388702 GTACTTAA 8mer-A1 dme-miR-252-5p X + 16387972 16388024 3'utr CG4239 FlyBase G46901.1 GTCAGCCCCATCTTCCCCCGGACAAATAGTACTTAACGCTGCCAGCCAAAGCT 17 16387998 0.932983327 6 15 66 0.875 1.322219295 0.166666667 0.294117647 0.5 17 3 0 21 X:16387972-16388024 8 20.5 5519 FBgn0030745 456.7933333 30.29666667 46.16666667 0.044878063 0.676642095 0.444043321 2 2 2 0.01 dme-miR-263a-5p 7mer-A1 TGCCATA X 16388355 16388361 + X_16388355_16388361_+ 0.782911824 0.782911824 0.782911824 0 CG4239 FBtr0340314|FBtr0074268|FBtr0074270|FBtr0074269 16387959|16387959|16387959|16387959 16388702|16388702|16388702|16388702 X + 16388315 16388385 3'utr CG4239 FlyBase G62104.1 ACAAGCGCAGCTGCAGAAACCAACCACAGACTTATTAAGATGCCATACTTAAGTGCTTTAAACATGGCCCA 6 16388349 0.945465336 5 6 22 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 X:16388315-16388385 7 CG4239 FBtr0074270|FBtr0074269|FBtr0340314|FBtr0074268 16387959|16387959|16387959|16387959 16388702|16388702|16388702|16388702 TGCCATA 7mer-A1 dme-miR-263a-5p X + 16388323 16388382 3'utr CG4239 FlyBase G46902.1 AGCTGCAGAAACCAACCACAGACTTATTAAGATGCCATACTTAAGTGCTTTAAACATGGC 7 16388349 0.947408243 5 6 32 0.909090909 1 0.272727273 0.285714286 0.545454545 7 1 0 10 X:16388323-16388382 7 2.5 5520 FBgn0030745 456.7933333 30.29666667 46.16666667 0.005472935 0.082517329 0.054151625 6 6 6 0.01 dme-miR-277-3p 7mer-A1 GCATTTA X 16388982 16388988 - X_16388982_16388988_- 0.734781499 0.823349537 0.779065518 0.062627033 TH1 FBtr0074305 16388818 16389295 X - 16388943 16389027 3'utr TH1 FlyBase G68089.1 ACGCATTTGAGCTTTCATTGTTTTAACATTTATACAAAAGCATTTAATTCAACATTGTGAACTAACATACCTACATTATTAAGCT 19 16388973 0.933219219 7 19 139 1 1.414973348 0 0.210526316 0.423076923 19 0 0 26 X:16388943-16389027 7 TH1 FBtr0074305 16388818 16389295 GCATTTA 7mer-A1 dme-miR-277-3p X - 16388954 16388984 3'utr TH1 FlyBase G51252.1 TTAATTCAACATTGTGAACTAACATACCTAC 9 16388973 0.741940029 3 7 54 0.916666667 1.041392685 0 0.333333333 0.5 9 1 0 11 X:16388954-16388984 3 7.5 5521 FBgn0010416 1122.11 63.41 96.64666667 0.006683837 0.118277874 0.077602263 -15 -15 -15 0.01 dme-miR-14-3p 7mer-m8 AAGACTG X 16436783 16436789 + X_16436783_16436789_+ 0.671795832 0.671795831 0.671795832 0 hang FBtr0074276 16436732 16438454 X + 16436767 16436798 3'utr hang FlyBase G62140.1 CAGCAAGACAAGCAGTAAGACTGTGGCAGCAG 20 16436782 0.843587723 2 18 42 0.863636364 1.278753601 0.545454545 0.1 0.181818182 20 3 0 19 X:16436767-16436798 7 hang FBtr0074276 16436732 16438454 AAGACTG 7mer-m8 dme-miR-14-3p X + 16436758 16436798 3'utr hang FlyBase G46929.1 CAATAATAACAGCAAGACAAGCAGTAAGACTGTGGCAGCAG 16 16436790 0.852672449 3 14 33 0.894736842 1.230448921 0.473684211 0.1875 0.315789474 16 2 0 17 X:16436758-16436798 7 17.5 5522 FBgn0026575 3688.81 55.80333333 85.77333333 0.004744077 0.313601338 0.204026115 1 -7 -3 0.01 dme-miR-33-5p 8mer-A1 CAATGCAA X 16436888 16436895 + X_16436888_16436895_+ 0.634552243 0.634552243 0.634552243 0 hang FBtr0343571|FBtr0290069|FBtr0074276 16436811|16436811|16436732 16438454|16438454|16438454 X + 16436808 16436927 stop_codon hang FlyBase G62141.1 ATTGAGTGATCATACTCCAACTACAACTCCAACTACCACTACCACTACCAACCACAACTACCAACCACACCTCATCATCTCAATGCAAAATCACTTGAAATGTACAAAGCCAATCCAATC 48 16436908 0.949845876 13 47 206 0.983050847 1.763427994 0.033898305 0.208333333 0.355932203 48 1 0 58 X:16436808-16436927 8 hang FBtr0343571|FBtr0290069|FBtr0074276 16436811|16436811|16436732 16438454|16438454|16438454 CAATGCAA 8mer-A1 dme-miR-33-5p X + 16436801 16436926 stop_codon hang FlyBase G46930.1 GCGACAAATTGAGTGATCATACTCCAACTACAACTCCAACTACCACTACCACTACCAACCACAACTACCAACCACACCTCATCATCTCAATGCAAAATCACTTGAAATGTACAAAGCCAATCCAAT 23 16436908 0.810966884 10 22 96 0.970588235 1.217483944 0 0.347826087 0.558823529 23 0 1 33 X:16436801-16436926 8 11 5523 FBgn0026575 3688.81 55.80333333 85.77333333 0.002981991 0.197120841 0.128244987 -20 -20 -20 0.01 dme-miR-305-5p 7mer-A1 GTACAAA X 16436909 16436915 + X_16436909_16436915_+ 0.720719851 0.782911824 0.751815838 0.043976314 hang FBtr0343571|FBtr0290069|FBtr0074276 16436811|16436811|16436732 16438454|16438454|16438454 X + 16436808 16436927 stop_codon hang FlyBase G62141.1 ATTGAGTGATCATACTCCAACTACAACTCCAACTACCACTACCACTACCAACCACAACTACCAACCACACCTCATCATCTCAATGCAAAATCACTTGAAATGTACAAAGCCAATCCAATC 48 16436908 0.949845876 13 47 206 0.983050847 1.763427994 0.033898305 0.208333333 0.355932203 48 1 0 58 X:16436808-16436927 7 hang FBtr0343571|FBtr0290069|FBtr0074276 16436811|16436811|16436732 16438454|16438454|16438454 GTACAAA 7mer-A1 dme-miR-305-5p X + 16436801 16436926 stop_codon hang FlyBase G46930.1 GCGACAAATTGAGTGATCATACTCCAACTACAACTCCAACTACCACTACCACTACCAACCACAACTACCAACCACACCTCATCATCTCAATGCAAAATCACTTGAAATGTACAAAGCCAATCCAAT 23 16436908 0.810966884 10 22 96 0.970588235 1.217483944 0 0.347826087 0.558823529 23 0 1 33 X:16436801-16436926 7 8 5524 FBgn0026575 3688.81 55.80333333 85.77333333 0.002168721 0.143360612 0.093269081 1 1 1 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 16437104 16437110 + X_16437104_16437110_+ 0.661615511 0.661615498 0.661615504 0 hang FBtr0343571|FBtr0290069|FBtr0074276 16436811|16436811|16436732 16438454|16438454|16438454 X + 16437087 16437201 3'utr hang FlyBase G62143.1 AACTTTTTTTTCTTGCTTCTAGTCTTAAGAACTTAAATTACATATATGTACATCATATATAAGACTTTTTTTTTAAATGTTAACCTAGTATGTACCGCGCACACACCCACACACA 73 16437104 0.992570651 18 63 730 0.875 1.146128036 0.010416667 0.273972603 0.447916667 73 7 5 84 X:16437087-16437201 7 hang FBtr0343571|FBtr0290069|FBtr0074276 16436811|16436811|16436732 16438454|16438454|16438454 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X + 16437076 16437166 3'utr hang FlyBase G46932.1 TTATATAACAAAACTTTTTTTTCTTGCTTCTAGTCTTAAGAACTTAAATTACATATATGTACATCATATATAAGACTTTTTTTTTAAATGT 41 16437111 0.991006703 14 40 432 0.983333333 1.770852012 0.066666667 0.341463415 0.55 41 1 0 59 X:16437076-16437166 7 24.5 5525 FBgn0026575 3688.81 55.80333333 85.77333333 0.006641708 0.439041873 0.285636561 0 -7 -3.5 0.01 dme-miR-14-3p 6mer3-8 AAGACT X 16437147 16437152 + X_16437147_16437152_+ 1 1 1 0 hang FBtr0343571|FBtr0290069|FBtr0074276 16436811|16436811|16436732 16438454|16438454|16438454 X + 16437087 16437201 3'utr hang FlyBase G62143.1 AACTTTTTTTTCTTGCTTCTAGTCTTAAGAACTTAAATTACATATATGTACATCATATATAAGACTTTTTTTTTAAATGTTAACCTAGTATGTACCGCGCACACACCCACACACA 73 16437154 0.992570651 18 63 730 0.875 1.146128036 0.010416667 0.273972603 0.447916667 73 7 5 84 X:16437087-16437201 6 hang FBtr0343571|FBtr0290069|FBtr0074276 16436811|16436811|16436732 16438454|16438454|16438454 AAGACT 6mer3-8 dme-miR-14-3p X + 16437076 16437166 3'utr hang FlyBase G46932.1 TTATATAACAAAACTTTTTTTTCTTGCTTCTAGTCTTAAGAACTTAAATTACATATATGTACATCATATATAAGACTTTTTTTTTAAATGT 41 16437154 0.991006703 14 40 432 0.983333333 1.770852012 0.066666667 0.341463415 0.55 41 1 0 59 X:16437076-16437166 6 28 5526 FBgn0026575 3688.81 55.80333333 85.77333333 0.007590524 0.501762141 0.326441785 -7 -7 -7 0.01 dme-miR-283-5p 6mer3-8 TGATAT X 16437293 16437298 + X_16437293_16437298_+ 1 1 1 0 hang FBtr0343571|FBtr0290069|FBtr0074276 16436811|16436811|16436732 16438454|16438454|16438454 X + 16437275 16437323 3'utr hang FlyBase G62145.1 AAATATATATACATACATTGATATAGTAGGATTAAGCATATAGAAAAGT 14 16437294 0.654192161 5 11 101 0.928571429 0.812913357 0 0.083333333 0.214285714 12 0 1 13 X:16437275-16437323 6 hang FBtr0343571|FBtr0290069|FBtr0074276 16436811|16436811|16436732 16438454|16438454|16438454 TGATAT 6mer3-8 dme-miR-283-5p X + 16437285 16437323 3'utr hang FlyBase G46934.1 ACATACATTGATATAGTAGGATTAAGCATATAGAAAAGT 7 16437313 0.98233907 2 4 41 0.555555556 0.698970004 0 0.285714286 0.444444444 7 4 0 5 X:16437285-16437323 6 9 5527 FBgn0026575 3688.81 55.80333333 85.77333333 0.002439811 0.161280688 0.104927716 -1 -20 -10.5 0.01 dme-miR-305-3p 6mer2-7 TGTGCC X 16438886 16438891 - X_16438886_16438891_- 1 1 1 0 CG9947 FBtr0343350 16437419 16439498 X - 16438850 16439054 3'utr CG9947 FlyBase G68114.1 TTTGTTGATGTTCTGTTCGTCCTTGATCCTATATGTGTGCACCCAATTTGTGATTTTTTCTATAACCTATTCCACCGCACATCACACACAACAAACAGTGGATACCCTTTGCAACATCCACACGAATTTCCACCATTGCTTTAGAAACAGCAAAGTAATACTTTGTGCCTGACTTAATCTGCATTGCCTTTTACTACGTTTATAC 214 16438891 0.988902453 28 209 1970 0.973684211 2.413299764 0.27443609 0.200934579 0.357142857 214 7 0 259 X:16438850-16439054 6 CG9947 FBtr0343350 16437419 16439498 TGTGCC 6mer2-7 dme-miR-305-3p X - 16438852 16438959 3'utr CG9947 FlyBase G51272.1 CAGTGGATACCCTTTGCAACATCCACACGAATTTCCACCATTGCTTTAGAAACAGCAAAGTAATACTTTGTGCCTGACTTAATCTGCATTGCCTTTTACTACGTTTAT 62 16438891 0.982563921 11 62 468 1 1.995635195 0.161616162 0.403225806 0.626262626 62 0 0 99 X:16438852-16438959 6 72.5 5528 FBgn0030752 672.6566667 47.85 73.07333333 0.107781582 1.515151515 0.992154001 0 0 0 0.01 dme-miR-308-3p 7mer-m1 TGTGATT X 16439000 16439006 - X_16439000_16439006_- 0.521223855 0.521223855 0.521223855 0 CG9947 FBtr0343350 16437419 16439498 X - 16438850 16439054 3'utr CG9947 FlyBase G68114.1 TTTGTTGATGTTCTGTTCGTCCTTGATCCTATATGTGTGCACCCAATTTGTGATTTTTTCTATAACCTATTCCACCGCACATCACACACAACAAACAGTGGATACCCTTTGCAACATCCACACGAATTTCCACCATTGCTTTAGAAACAGCAAAGTAATACTTTGTGCCTGACTTAATCTGCATTGCCTTTTACTACGTTTATAC 214 16439008 0.988902453 28 209 1970 0.973684211 2.413299764 0.27443609 0.200934579 0.357142857 214 7 0 259 X:16438850-16439054 7 CG9947 FBtr0343350 16437419 16439498 TGTGATT 7mer-m1 dme-miR-308-3p X - 16438972 16439055 3'utr CG9947 FlyBase G51273.1 TTTTGTTGATGTTCTGTTCGTCCTTGATCCTATATGTGTGCACCCAATTTGTGATTTTTTCTATAACCTATTCCACCGCACATC 89 16439008 0.991982313 12 87 968 0.98245614 2.049218023 0.403508772 0.258426966 0.421052632 89 2 0 112 X:16438972-16439055 7 57 5529 FBgn0030752 672.6566667 47.85 73.07333333 0.084738623 1.191222571 0.780038318 2 2 2 0.01 dme-miR-1012-3p 6mer2-7 TGACTA X 16445250 16445255 + X_16445250_16445255_+ 1 1 1 0 rngo FBtr0343349 16444757 16445367 X + 16445212 16445268 3'utr rngo FlyBase G62161.1 TGAAACAAGTAAATACAAAAGAAAAACGAAAGAATGCCTGACTATTAAATAATATTA 13 16445255 0.903037769 5 12 57 0.933333333 1.146128036 0.066666667 0.153846154 0.266666667 13 1 0 14 X:16445212-16445268 6 rngo FBtr0343349 16444757 16445367 TGACTA 6mer2-7 dme-miR-1012-3p X + 16445238 16445268 3'utr rngo FlyBase G46943.1 CGAAAGAATGCCTGACTATTAAATAATATTA 9 16445256 0.762802238 3 6 53 0.769230769 1 0 0.333333333 0.538461538 9 3 0 10 X:16445238-16445268 6 10 5530 FBgn0030753 1218.62 66.64333333 101.9733333 0.008206004 0.150052518 0.098064854 -5 -6 -5.5 0.01 dme-miR-932-5p 6mer2-7 GAATTG X 16445317 16445322 + X_16445317_16445322_+ 1 1 1 0 rngo FBtr0343349 16444757 16445367 X + 16445280 16445360 3'utr rngo FlyBase G62162.1 AATTTGAATTAGTATTAAGGGTCTGTCAAGAAAAACTGAATTGGGTTCAATAATAAATGGTCGATAGTATTGTTTTGGATT 32 16445320 0.80084538 7 31 244 0.975 1.290034611 0.125 0.1875 0.35 32 0 1 39 X:16445280-16445360 6 rngo FBtr0343349 16444757 16445367 GAATTG 6mer2-7 dme-miR-932-5p X + 16445308 16445350 3'utr rngo FlyBase G46944.1 AGAAAAACTGAATTGGGTTCAATAATAAATGGTCGATAGTATT 8 16445320 0.776556172 3 8 53 1 1.113943352 0.153846154 0.5 0.692307692 8 0 0 13 X:16445308-16445350 6 11 5531 FBgn0030753 1218.62 66.64333333 101.9733333 0.009026604 0.16505777 0.107871339 -3 -3 -3 0.01 dme-miR-283-5p 6mer3-8 TGATAT X 16452337 16452342 + X_16452337_16452342_+ 1 1 1 0 Rbp2 FBtr0343633|FBtr0074280|FBtr0343632|FBtr0074281|FBtr0074279 16452084|16452084|16452084|16452084|16452084 16453615|16454972|16453615|16453615|16454972 X + 16452299 16452418 3'utr Rbp2 FlyBase G62170.1 AATTAATAACACTACGCTACATACCTATTATATACGAATGATATGTACTACATTACAAGAACGAAGATGGAACAACAGGCTGGCCTCTGTGTCTCTGTGTCAGTGTCCAGTGTCAGTCAG 390 16452342 0.950374342 17 383 2387 0.982954545 2.238046103 0.037878788 0.248717949 0.445075758 390 7 2 519 X:16452299-16452418 6 Rbp2 FBtr0074279|FBtr0343633|FBtr0074280|FBtr0343632|FBtr0074281 16452084|16452084|16452084|16452084|16452084 16454972|16453615|16454972|16453615|16453615 TGATAT 6mer3-8 dme-miR-283-5p X + 16452248 16452370 3'utr Rbp2 FlyBase G46950.1 GATGACGATGACAAGGAGCATCAGCAGCATGCATATATAAACACATACATTAATTAATAACACTACGCTACATACCTATTATATACGAATGATATGTACTACATTACAAGAACGAAGATGGAA 316 16452342 0.940728654 15 312 1873 0.991561181 2.371067862 0.05907173 0.370253165 0.580168776 316 3 1 470 X:16452248-16452370 6 333 5532 FBgn0262734 5061.32 184.5666667 285.3533333 0.065793113 1.804226115 1.166974278 -5 -5 -5 0.01 dme-miR-305-3p 6mer3-8 ATGTGC X 16452645 16452650 + X_16452645_16452650_+ 0.993521269 1 0.996760634 0.004581133 Rbp2 FBtr0343633|FBtr0074280|FBtr0343632|FBtr0074281|FBtr0074279 16452084|16452084|16452084|16452084|16452084 16453615|16454972|16453615|16453615|16454972 X + 16452615 16452716 3'utr Rbp2 FlyBase G62172.1 TATATATATGGTATATATATATATACGGTTATGTGCGCTTCATTGTACAGCAGCTGTATGCACGCTGCTATTTGTTAGTTAAGTGATGGATATAAACCAACA 14 16452658 0.994985638 7 13 138 0.933333333 1.146128036 0.333333333 0.071428571 0.133333333 14 1 0 14 X:16452615-16452716 6 Rbp2 FBtr0074279|FBtr0343633|FBtr0074280|FBtr0343632|FBtr0074281 16452084|16452084|16452084|16452084|16452084 16454972|16453615|16454972|16453615|16453615 ATGTGC 6mer3-8 dme-miR-305-3p X + 16452633 16452690 3'utr Rbp2 FlyBase G46952.1 ATATATACGGTTATGTGCGCTTCATTGTACAGCAGCTGTATGCACGCTGCTATTTGTT 6 16452648 0.9840768 3 5 51 1 1.041392685 0.454545455 0.5 0.727272727 6 0 0 11 X:16452633-16452690 6 6.5 5533 FBgn0262734 5061.32 184.5666667 285.3533333 0.00128425 0.035217627 0.022778777 -13 -3 -8 0.01 dme-bantam-3p 7mer-A1 GATCTCA X 1649339 1649345 + X_1649339_1649345_+ 0.823349562 0.823349562 0.823349562 0 br FBtr0070261|FBtr0330406|FBtr0300427|FBtr0300428|FBtr0332293|FBtr0070263 1648712|1649105|1648712|1648712|1648712|1648712 1649378|1649378|1649378|1649378|1649378|1649378 X + 1649280 1649357 3'utr br FlyBase G58005.1 GAAAAAGGAGCAGAGGGAGATTAGGACTATACTACTACCACGTAGACATTTCAATTTCGGATCTCACAGAACGGAAAA 40 1649335 0.974229974 7 39 240 1 1.653212514 0.4 0.125 0.222222222 40 0 0 45 X:1649280-1649357 7 br FBtr0300427|FBtr0070261|FBtr0330406|FBtr0070263|FBtr0300428|FBtr0332293 1648712|1648712|1649105|1648712|1648712|1648712 1649378|1649378|1649378|1649378|1649378|1649378 GATCTCA 7mer-A1 dme-bantam-3p X + 1649282 1649362 3'utr br FlyBase G43884.1 AAAAGGAGCAGAGGGAGATTAGGACTATACTACTACCACGTAGACATTTCAATTTCGGATCTCACAGAACGGAAAATTCAA 33 1649335 0.982257346 8 29 214 0.895833333 1.633468456 0.3125 0.333333333 0.541666667 33 5 0 43 X:1649282-1649362 7 25.5 5534 FBgn0000210 1688.696667 27.97 43.00333333 0.015100403 0.911691098 0.592977289 4 4 4 0.01 dme-miR-12-5p 6mer3-8 AATACT X 16543530 16543535 - X_16543530_16543535_- 1 1 1 0 CG9902 FBtr0334035 16542122 16543682 X - 16543516 16543562 3'utr CG9902 FlyBase G68141.1 AAGGAACAAACGGAACAGGATCTGCCAAATACTAGAAAACACAAAGA 50 16543540 0.889663327 3 50 142 1 1.77815125 0.25 0.14 0.283333333 50 0 0 60 X:16543516-16543562 6 CG9902 FBtr0334035 16542122 16543682 AATACT 6mer3-8 dme-miR-12-5p X - 16543520 16543556 3'utr CG9902 FlyBase G51292.1 CAAACGGAACAGGATCTGCCAAATACTAGAAAACACA 27 16543540 0.881598182 4 26 80 0.945945946 1.544068044 0.216216216 0.296296296 0.486486486 27 2 0 35 X:16543520-16543556 6 38.5 5535 FBgn0030757 334.18 9.023333333 13.79333333 0.115207373 4.266715922 2.79120348 5 5 5 0.01 dme-bantam-3p 8mer-A1 TGATCTCA X 16543637 16543644 - X_16543637_16543644_- 0.631136385 0.631136385 0.631136385 0 CG9902 FBtr0074296|FBtr0334035 16543568|16542122 16543682|16543682 X - 16543620 16543672 3'utr CG9902 FlyBase G68143.1 AGTCCCCAGGAGATGTCATAGAAACTAGTGATCTCAAACAGGTCCCCCTAAAT 145 16543644 0.73443773 7 141 637 0.98245614 2.225309282 0.087719298 0.166666667 0.298245614 144 3 0 168 X:16543620-16543672 8 CG9902 FBtr0334035 16542122 16543682 TGATCTCA 8mer-A1 dme-bantam-3p X - 16543581 16543771 stop_codon CG9902 FlyBase G51293.1 TGATCCATGACGCCCTAAAAACTACAAACGTGCCACAGAAGACTCTGGACTTACAGTTCTTGTCCAAGAAGCACATAAGAACTGGATAACAGACCCAGGAGTCCCCAGGAGATGTCATAGAAACTAGTGATCTCAAACAGGTCCCCCTAAATAGCCTGTTCAAAGTAGAGGGACTGGATGCAAGACAGGCG 112 16543644 0.956704622 14 106 480 0.950310559 1.883661435 0.093167702 0.383928571 0.571428571 112 7 1 153 X:16543581-16543771 8 115.5 5536 FBgn0030757 334.18 9.023333333 13.79333333 0.34562212 12.80014777 8.37361044 0 0 0 0.01 dme-miR-317-5p 6mer2-7 TATCCC X 16548995 16549000 - X_16548995_16549000_- 1 1 1 0 Arp2 FBtr0074295|FBtr0112868|FBtr0310673 16548783|16548288|16548783 16549241|16549241|16549241 X - 16548972 16549024 3'utr Arp2 FlyBase G68153.1 CGCAGACATGTCGTCACTGGTCGTTATCCCCGTACAATATAATGTAATATTTC 12 16549007 0.983959236 4 12 93 1 1.113943352 0.076923077 0.083333333 0.153846154 12 0 0 13 X:16548972-16549024 6 Arp2 FBtr0074295|FBtr0112868|FBtr0310673 16548783|16548288|16548783 16549241|16549241|16549241 TATCCC 6mer2-7 dme-miR-317-5p X - 16548988 16549103 3'utr Arp2 FlyBase G51299.1 TTTTTTTTTGTGTGTGCCTGTGCGAGTGGGCGTGTCTGTTGAGCAGGATTGGTCCACTTGCCCTTAGATTATCTATAATCGCAGACATGTCGTCACTGGTCGTTATCCCCGTACAA 23 16549007 0.892785871 11 22 178 0.957446809 1.653212514 0.234042553 0.652173913 0.829787234 23 2 0 45 X:16548988-16549103 6 11.5 5537 FBgn0011742 1137.096667 58.09666667 88.67333333 0.010113476 0.197945952 0.129689497 7 7 7 0.01 dme-miR-283-5p 6mer3-8 TGATAT X 16549121 16549126 - X_16549121_16549126_- 1 1 1 0 Arp2 FBtr0074295|FBtr0112868|FBtr0310673 16548783|16548288|16548783 16549241|16549241|16549241 X - 16549040 16549146 3'utr Arp2 FlyBase G68154.1 TTAAACCTTTCAGATTTACGTGATATATCCGTCTATATATGTTTTTTTTTTTGTGTGTGCCTGTGCGAGTGGGCGTGTCTGTTGAGCAGGATTGGTCCACTTGCCCT 50 16549132 0.98866389 14 45 427 0.915254237 1.73239376 0.169491525 0.14 0.271186441 50 5 0 54 X:16549040-16549146 6 Arp2 FBtr0074295|FBtr0112868|FBtr0310673 16548783|16548288|16548783 16549241|16549241|16549241 TGATAT 6mer3-8 dme-miR-283-5p X - 16549109 16549155 3'utr Arp2 FlyBase G51300.1 TCTATAGGTTTAAACCTTTCAGATTTACGTGATATATCCGTCTATAT 21 16549132 0.836781271 8 20 197 0.96 1.380211242 0.04 0.19047619 0.32 21 1 0 24 X:16549109-16549155 6 29.5 5538 FBgn0011742 1137.096667 58.09666667 88.67333333 0.025943265 0.507774399 0.332681753 6 6 6 0.01 dme-miR-277-3p 6mer3-8 TGCATT X 16554990 16554995 - X_16554990_16554995_- 1 0.999999999 0.999999999 0 Pp2B-14D FBtr0309793 16554625 16557694 X - 16554993 16555027 3'utr Pp2B-14D FlyBase G68169.1 AATTGTAAATTTTGGATTCTCTTAGGGCGATTTGC 18 16555006 0.829960061 2 17 156 0.952380952 1.301029996 0 0.111111111 0.238095238 18 1 0 20 X:16554993-16555027 2 Pp2B-14D FBtr0309793 16554625 16557694 TGCATT 6mer3-8 dme-miR-277-3p X - 16554990 16555021 3'utr Pp2B-14D FlyBase G51312.1 AAATTTTGGATTCTCTTAGGGCGATTTGCATT 13 16555006 0.822803349 2 12 124 0.909090909 0.823908741 0 0.461538462 0.681818182 13 0 2 20 X:16554990-16555021 5 2 5539 FBgn0011826 681.1066667 22.76 35.00666667 0.002936398 0.087873462 0.057131975 11 11 11 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT X 16556788 16556793 - X_16556788_16556793_- 1 1 1 0 Pp2B-14D FBtr0074294|FBtr0309793|FBtr0305593 16556762|16554625|16555464 16557694|16557694|16557694 X - 16556774 16556806 3'utr Pp2B-14D FlyBase G68170.1 ATAGTCCATAAATGTTCCTTATACGAATTAAAC 8 16556794 0.903501627 2 8 62 1 1.113943352 0 0.375 0.615384615 8 0 0 13 X:16556774-16556806 6 Pp2B-14D FBtr0305593|FBtr0309793|FBtr0074294 16555464|16554625|16556762 16557694|16557694|16557694 GTTCCT 6mer2-7 dme-miR-276a-3p X - 16556784 16556832 3'utr Pp2B-14D FlyBase G51313.1 CGAAACCATTTGCAATATGTGCCGCAATAGTCCATAAATGTTCCTTATA 5 16556787 0.984620057 4 5 36 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 X:16556784-16556832 6 5.5 5540 FBgn0011826 681.1066667 22.76 35.00666667 0.008075093 0.241652021 0.157112931 1 -6 -2.5 0.01 dme-miR-932-5p 6mer2-7 GAATTG X 16557616 16557621 - X_16557616_16557621_- 1 1 1 0 Pp2B-14D FBtr0074294|FBtr0309793|FBtr0305593 16556762|16554625|16555464 16557694|16557694|16557694 X - 16557592 16557658 3'utr Pp2B-14D FlyBase G68175.1 AGATGCAGATGCGGCACGGTGGAGTCTGGCGAGGTCTGAATTGGTCTGAAGGAGGGGCTGAGTGGAG 13 16557618 0.732007478 6 12 71 1 1.113943352 0.461538462 0 0 13 0 0 13 X:16557592-16557658 6 Pp2B-14D FBtr0305593|FBtr0309793|FBtr0074294 16555464|16554625|16556762 16557694|16557694|16557694 GAATTG 6mer2-7 dme-miR-932-5p X - 16557581 16557655 3'utr Pp2B-14D FlyBase G51315.1 TGCAGATGCGGCACGGTGGAGTCTGGCGAGGTCTGAATTGGTCTGAAGGAGGGGCTGAGTGGAGCGGAGCGGAGG 8 16557618 0.954280191 5 8 38 1 1 0.3 0.25 0.4 8 0 0 10 X:16557581-16557655 6 7 5541 FBgn0011826 681.1066667 22.76 35.00666667 0.010277392 0.307557118 0.199961912 -3 -3 -3 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA X 16564044 16564049 - X_16564044_16564049_- 1 1 1 0 CanA-14F FBtr0305198|FBtr0074293 16560682|16561675 16566275|16566275 X - 16564018 16564071 3'utr CanA-14F FlyBase G68186.1 AAAACAGAAAAGAAACCGAACTATGTGAATTAACTATTAAGTTTAAATTATACA 19 16564042 0.978540548 4 19 130 1 1.414973348 0.115384615 0.315789474 0.5 19 0 0 26 X:16564018-16564071 6 CanA-14F FBtr0074293|FBtr0305198 16561675|16560682 16566275|16566275 ATGTGA 6mer3-8 dme-miR-1003-3p X - 16564028 16564072 3'utr CanA-14F FlyBase G51321.1 AAAAACAGAAAAGAAACCGAACTATGTGAATTAACTATTAAGTTT 22 16564042 0.980200402 3 22 159 1 1.491361694 0.225806452 0.409090909 0.580645161 22 0 0 31 X:16564028-16564072 6 20.5 5542 FBgn0030758 2469.373333 77.76333333 120.6366667 0.008301701 0.263620387 0.169931751 -7 -7 -7 0.01 dme-miR-2b-2-5p 6mer2-7 TGAAGA X 16564507 16564512 - X_16564507_16564512_- 1 1 1 0 CanA-14F FBtr0332870|FBtr0305198|FBtr0074293 16564313|16560682|16561675 16566275|16566275|16566275 X - 16564482 16564541 3'utr CanA-14F FlyBase G68188.1 AGACGTAGTGGAGAATTCAAAGGGGGATATGAAGAGAATAGAATAGAGCAGAGCAGAAAA 12 16564503 0.90104621 3 11 31 0.928571429 1.113943352 0 0.083333333 0.214285714 12 1 0 13 X:16564482-16564541 6 CanA-14F FBtr0074293|FBtr0305198|FBtr0332870 16561675|16560682|16564313 16566275|16566275|16566275 TGAAGA 6mer2-7 dme-miR-2b-2-5p X - 16564425 16564520 3'utr CanA-14F FlyBase G51322.1 GGGGGATATGAAGAGAATAGAATAGAGCAGAGCAGAAAAAAATAAATAGAAACGCGAAGCCTAACTAATGAAGATTGTAATTAACGTGTGCAAAGG 10 16564503 0.945640761 7 9 32 1 1.079181246 0.166666667 0.2 0.333333333 10 0 0 12 X:16564425-16564520 6 8 5543 FBgn0030758 2469.373333 77.76333333 120.6366667 0.003239688 0.102876248 0.06631483 -9 -9 -9 0.01 dme-miR-986-5p 6mer3-8 ATTCGA X 16595303 16595308 + X_16595303_16595308_+ 0.992317559 0.728380214 0.860348886 0.186631925 Ubc7 FBtr0074283|FBtr0340157 16594808|16594808 16595416|16595867 X + 16595286 16595323 3'utr Ubc7 FlyBase G62184.1 TAGTCATTACACACTTAATTCGACTGATCATTAACTGA 14 16595304 0.70042807 6 14 102 1 1.230448921 0 0.142857143 0.294117647 14 0 0 17 X:16595286-16595323 6 Ubc7 FBtr0074283|FBtr0340157 16594808|16594808 16595416|16595867 ATTCGA 6mer3-8 dme-miR-986-5p X + 16595293 16595324 3'utr Ubc7 FlyBase G46962.2 TACACACTTAATTCGACTGATCATTAACTGAA 8 16595304 0.72110378 4 7 47 0.928571429 1.113943352 0 0.375 0.642857143 8 1 0 13 X:16595293-16595324 6 10 5544 FBgn0267384 316.29 26.46 40.41666667 0.031616554 0.377928949 0.24742268 -1 -1 -1 0.01 dme-miR-12-5p 6mer3-8 AATACT X 1659716 1659721 + X_1659716_1659721_+ 1 1 1 0 br FBtr0070265|FBtr0303562 1659601|1654641 1664869|1664869 X + 1659693 1659731 3'utr br FlyBase G58010.1 AGCAGCAGCCAAGACCAGCTACAAATACTTTGCCCATTG 9 1659718 0.97205643 3 9 53 1 0.954242509 0.555555556 0 0 9 0 0 9 X:1659693-1659731 6 br FBtr0070265|FBtr0303562 1659601|1654641 1664869|1664869 AATACT 6mer3-8 dme-miR-12-5p X + 1659696 1659734 3'utr br FlyBase G43887.1 AGCAGCCAAGACCAGCTACAAATACTTTGCCCATTGTTT 10 1659729 0.990986426 4 6 61 0.625 0.698970004 0.0625 0.4 0.625 10 5 1 10 X:1659696-1659734 6 9 5545 FBgn0000210 1688.696667 27.97 43.00333333 0.005329554 0.321773329 0.209286102 -2 -13 -7.5 0.01 dme-miR-970-3p 6mer3-8 TCTTAT X 1659880 1659885 + X_1659880_1659885_+ 1 1 1 0 br FBtr0070265|FBtr0303562 1659601|1654641 1664869|1664869 X + 1659844 1659888 3'utr br FlyBase G58011.1 ATATTAGGCATATTTTGGCGTCAACTGTTTTATTACTCTTATCCC 15 1659876 0.850632795 5 12 156 0.866666667 1.113943352 0 0 0 15 2 0 13 X:1659844-1659888 6 br FBtr0070265|FBtr0303562 1659601|1654641 1664869|1664869 TCTTAT 6mer3-8 dme-miR-970-3p X + 1659850 1659883 3'utr br FlyBase G43888.1 GGCATATTTTGGCGTCAACTGTTTTATTACTCTT 9 1659876 0.91975619 4 7 80 0.818181818 0.954242509 0.090909091 0.222222222 0.363636364 9 2 0 9 X:1659850-1659883 4 5.5 5546 FBgn0000210 1688.696667 27.97 43.00333333 0.00325695 0.196639256 0.127897062 4 4 4 0.01 dme-miR-980-3p 6mer3-8 GGCAGC X 16609165 16609170 + X_16609165_16609170_+ 1 1 1 0 Nup153 FBtr0074284|FBtr0340158|FBtr0299587 16609097|16609097|16609097 16610459|16610459|16610459 X + 16609106 16609184 3'utr Nup153 FlyBase G62212.1 ATCGCAGTCGGCCATCACGATAGCAAATGAGGCCGCCGTCGGATTAGGATTAAGATATTGGCAGCCATTGCCGAGAGTA 15 16609164 0.994684754 6 14 66 1 1.146128036 0.142857143 0 0 14 0 0 14 X:16609106-16609184 6 Nup153 FBtr0299587|FBtr0074284|FBtr0340158 16609097|16609097|16609097 16610459|16610459|16610459 GGCAGC 6mer3-8 dme-miR-980-3p X + 16609127 16609181 3'utr Nup153 FlyBase G46977.1 AGCAAATGAGGCCGCCGTCGGATTAGGATTAAGATATTGGCAGCCATTGCCGAGA 6 16609164 0.948960344 3 5 25 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 X:16609127-16609181 6 5.5 5547 FBgn0061200 3129.656667 47.90333333 73.78666667 0.001757381 0.114814557 0.074539212 1 1 1 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA X 16609733 16609738 + X_16609733_16609738_+ 1 1 1 0 Nup153 FBtr0074284|FBtr0340158|FBtr0299587 16609097|16609097|16609097 16610459|16610459|16610459 X + 16609719 16609754 3'utr Nup153 FlyBase G62214.1 CATACTACGCATATTGATGATTACAAATTATAAAAA 8 16609733 0.670631461 4 8 54 1 0.954242509 0 0.125 0.222222222 8 0 0 9 X:16609719-16609754 6 Nup153 FBtr0299587|FBtr0074284|FBtr0340158 16609097|16609097|16609097 16610459|16610459|16610459 TGATGA 6mer3-8 dme-miR-2a-2-5p X + 16609722 16609751 3'utr Nup153 FlyBase G46978.1 ACTACGCATATTGATGATTACAAATTATAA 5 16609733 0.638750851 4 5 35 1 0.954242509 0 0.6 0.777777778 5 0 0 9 X:16609722-16609751 6 6.5 5548 FBgn0061200 3129.656667 47.90333333 73.78666667 0.002076905 0.135689931 0.088091796 0 0 0 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT X 16614135 16614141 + X_16614135_16614141_+ 0.658999527 0.658999527 0.658999527 0 mbt FBtr0074285 16614013 16614856 X + 16613967 16614180 stop_codon mbt FlyBase G62229.1 CCGTCGCTGCTGGTTCCGCTGATGCGCAATGCGCGACACCATCCGTAGTTGGATGCCACTGGACAACCCAGACGATCCGGCTGCTCGATGAAAGCAATCATTCCCACAGACAACGGATCCCGGCCCGTGGGCATCCATCTATTAAATTCTAGTATTAACATTCAGTTTGGCAGCTGTACTTAAATCCCCGGAGAATCCTCGAAACGTTGTAAAG 633 16614133 0.953262788 26 615 5004 0.970914127 2.146748014 0.159279778 0.129541864 0.236842105 633 17 4 701 X:16613967-16614180 7 mbt FBtr0074285 16614013 16614856 GGCAGCT 7mer-m8 dme-miR-980-3p X + 16614110 16614168 3'utr mbt FlyBase G46987.1 AAATTCTAGTATTAACATTCAGTTTGGCAGCTGTACTTAAATCCCCGGAGAATCCTCGA 455 16614133 0.737649622 10 444 3565 0.979885057 2.231724383 0.139367816 0.384615385 0.597701149 455 11 3 682 X:16614110-16614168 7 529 5549 FBgn0025743 524.9733333 19.44666667 29.74666667 1.007670231 27.20260542 17.78350515 2 2 2 0.01 dme-miR-277-3p 7mer-A1 GCATTTA X 16614318 16614324 + X_16614318_16614324_+ 0.823349562 0.823349562 0.823349562 0 mbt FBtr0074285 16614013 16614856 X + 16614299 16614334 3'utr mbt FlyBase G62231.1 CGGATGGAGAAACGATATAGCATTTATCTGCCCGAG 7 16614316 0.684407251 4 7 41 1 1.079181246 0.25 0.571428571 0.75 7 0 0 12 X:16614299-16614334 7 mbt FBtr0074285 16614013 16614856 GCATTTA 7mer-A1 dme-miR-277-3p X + 16614283 16614338 3'utr mbt FlyBase G46988.1 CATCCTGCAACCGATACGGATGGAGAAACGATATAGCATTTATCTGCCCGAGAACC 6 16614326 0.965924525 4 5 27 0.714285714 0.698970004 0.285714286 0.166666667 0.285714286 6 2 0 5 X:16614283-16614338 7 5.5 5550 FBgn0025743 524.9733333 19.44666667 29.74666667 0.010476723 0.28282482 0.184894666 2 -8 -3 0.01 dme-miR-277-3p 6mer2-7 GCATTT X 16614383 16614388 + X_16614383_16614388_+ 1 1 1 0 mbt FBtr0074285 16614013 16614856 X + 16614373 16614433 3'utr mbt FlyBase G62232.1 GAGTATTTCAGCATTTTGCTCTCTGTCTCTTGTCAATATTGATTTGTGTGCGTGTGTGTTT 7 16614389 0.998602379 5 5 81 0.777777778 0.84509804 0.222222222 0.142857143 0.333333333 7 2 0 7 X:16614373-16614433 6 mbt FBtr0074285 16614013 16614856 GCATTT 6mer2-7 dme-miR-277-3p X + 16614354 16614404 3'utr mbt FlyBase G46989.1 TATATATATATACATATATGAGTATTTCAGCATTTTGCTCTCTGTCTCTTG 6 16614389 0.993776173 5 5 64 0.875 0.84509804 0.125 0.166666667 0.375 6 1 0 7 X:16614354-16614404 6 4.5 5551 FBgn0025743 524.9733333 19.44666667 29.74666667 0.008571864 0.231402125 0.151277454 -6 -6 -6 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA X 16624331 16624336 - X_16624331_16624336_- 1 1 1 0 Rok FBtr0074286|FBtr0340151 16624209|16624209 16626162|16626162 X - 16624297 16624346 3'utr Rok FlyBase G68217.1 ACTATTATTATGATGATCATTCGTATTACGTTTATGTTTAATTGTACTCT 12 16624336 0.990467617 5 11 125 1 1.176091259 0 0.166666667 0.333333333 12 0 0 15 X:16624297-16624346 6 Rok FBtr0074286|FBtr0340151 16624209|16624209 16626162|16626162 TGATGA 6mer3-8 dme-miR-2a-2-5p X - 16624319 16624346 3'utr Rok FlyBase G51339.1 ACTATTATTATGATGATCATTCGTATTA 11 16624336 0.752953059 2 10 104 0.9375 1.176091259 0 0.272727273 0.5 11 1 0 15 X:16624319-16624346 6 10.5 5552 FBgn0026181 1648.443333 28.48333333 43.82 0.006369646 0.36863663 0.239616613 0 0 0 0.01 dme-miR-277-3p 8mer-A1 TGCATTTA X 16624512 16624519 - X_16624512_16624519_- 0.625364269 0.625364269 0.625364269 0 Rok FBtr0074286|FBtr0340151 16624209|16624209 16626162|16626162 X - 16624492 16624566 3'utr Rok FlyBase G68218.1 GTTTTACAGAGCAGAGTGTATGTACAGAGTGAGAGGCGCCAGCGGATTGCATTTAAAAGTAACAATAATAGCGAA 193 16624520 0.910514222 4 190 915 0.995391705 2.033423755 0.400921659 0.10880829 0.207373272 193 0 1 216 X:16624492-16624566 8 Rok FBtr0074286|FBtr0340151 16624209|16624209 16626162|16626162 TGCATTTA 8mer-A1 dme-miR-277-3p X - 16624496 16624561 3'utr Rok FlyBase G51340.1 ACAGAGCAGAGTGTATGTACAGAGTGAGAGGCGCCAGCGGATTGCATTTAAAAGTAACAATAATAG 117 16624520 0.907027154 5 116 560 0.98757764 1.72427587 0.341614907 0.324786325 0.50931677 117 0 2 159 X:16624496-16624561 8 149 5553 FBgn0026181 1648.443333 28.48333333 43.82 0.090388306 5.231129315 3.400273848 1 1 1 0.01 dme-miR-33-5p 8mer-A1 CAATGCAA X 16625779 16625786 - X_16625779_16625786_- 0.634552243 0.634552243 0.634552243 0 Rok FBtr0340153|FBtr0074286|FBtr0340151 16625107|16624209|16624209 16626162|16626162|16626162 X - 16625767 16625810 3'utr Rok FlyBase G68225.1 TGTATCTTAAAGAACATGTAATGCCAATGCAACTCGTTTAACGC 26 16625789 0.827796051 6 24 150 0.933333333 1.146128036 0.066666667 0.115384615 0.233333333 26 1 1 28 X:16625767-16625810 8 Rok FBtr0074286|FBtr0340151|FBtr0340153 16624209|16624209|16625107 16626162|16626162|16626162 CAATGCAA 8mer-A1 dme-miR-33-5p X - 16625758 16625815 3'utr Rok FlyBase G51347.1 AAAGCTGTATCTTAAAGAACATGTAATGCCAATGCAACTCGTTTAACGCTTACCTAAC 19 16625789 0.964536286 3 18 102 1 1.531478917 0.382352941 0.421052632 0.676470588 19 0 0 34 X:16625758-16625815 8 21 5554 FBgn0026181 1648.443333 28.48333333 43.82 0.012739291 0.737273259 0.479233227 3 3 3 0.01 dme-miR-980-3p 6mer2-7 GCAGCT X 16626085 16626090 - X_16626085_16626090_- 1 1 1 0 Rok FBtr0340153|FBtr0074286|FBtr0340151 16625107|16624209|16624209 16626162|16626162|16626162 X - 16626054 16626113 3'utr Rok FlyBase G68227.1 TGCCAGATCGCAGGCGTGGCAATGCAGCTTGAGCCGGAGCAGTCGCGACTCTCCAGCCCC 80 16626084 0.728811412 4 73 263 0.923076923 1.225309282 0.285714286 0.1375 0.241758242 80 3 4 84 X:16626054-16626113 6 Rok FBtr0074286|FBtr0340151|FBtr0340153 16624209|16624209|16625107 16626162|16626162|16626162 GCAGCT 6mer2-7 dme-miR-980-3p X - 16626064 16626113 3'utr Rok FlyBase G51349.1 TGCCAGATCGCAGGCGTGGCAATGCAGCTTGAGCCGGAGCAGTCGCGACT 52 16626084 0.709587782 4 50 164 0.964285714 1.306425028 0.345238095 0.403846154 0.630952381 52 0 3 81 X:16626064-16626113 6 64.5 5555 FBgn0026181 1648.443333 28.48333333 43.82 0.039127824 2.264482153 1.471930625 -6 -6 -6 0.01 dme-bantam-3p 6mer3-8 TGATCT X 1662652 1662657 + X_1662652_1662657_+ 1 1 1 0 br FBtr0070265|FBtr0303562 1659601|1654641 1664869|1664869 X + 1662617 1662671 3'utr br FlyBase G58016.1 GAAAACGAAAAATAATGCAAATGCAAAACAAACTGTGATCTTACAAGTTTTTGAA 37 1662657 0.956516728 5 34 175 0.93877551 1.361727836 0 0.216216216 0.408163265 37 2 1 46 X:1662617-1662671 6 br FBtr0070265|FBtr0303562 1659601|1654641 1664869|1664869 TGATCT 6mer3-8 dme-bantam-3p X + 1662634 1662660 3'utr br FlyBase G43891.1 CAAATGCAAAACAAACTGTGATCTTAC 19 1662657 0.698437328 4 18 87 0.96 1.380211242 0 0.157894737 0.36 19 1 0 24 X:1662634-1662660 6 26.5 5556 FBgn0000210 1688.696667 27.97 43.00333333 0.015692576 0.94744369 0.6162313 -5 -5 -5 0.01 dme-miR-305-5p 8mer-m1 AGTACAAT X 16649157 16649164 + X_16649157_16649164_+ 0.570363044 0.570363044 0.570363044 0 mthl1 FBtr0074314|FBtr0340150 16643506|16643506 16649697|16650309 X + 16649119 16649168 3'utr mthl1 FlyBase G62241.1 ATGTATTTTAGCTCTTGAAAACGCAGAAACTACAATGCAGTACAATTATT 10 16649155 0.964380718 4 9 49 0.923076923 1.079181246 0 0.2 0.384615385 10 1 0 12 X:16649119-16649168 8 mthl1 FBtr0340150|FBtr0074314 16643506|16643506 16650309|16649697 AGTACAAT 8mer-m1 dme-miR-305-5p X + 16649082 16649182 3'utr mthl1 FlyBase G46998.1 GAGATGTATTCCCCCTCCCAATTACAAACGTATTTTTATGTATTTTAGCTCTTGAAAACGCAGAAACTACAATGCAGTACAATTATTATTTCTCATAAGAT 15 16649154 0.972312921 7 15 95 1 1.447158031 0 0.266666667 0.607142857 15 0 0 28 X:16649082-16649182 8 10 5557 FBgn0030766 372.0033333 8.846666667 13.59666667 0.02688148 1.130369254 0.735474381 2 3 2.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG X 16649288 16649293 + X_16649288_16649293_+ 1 0.997164165 0.998582083 0.002005213 mthl1 FBtr0074314|FBtr0340150 16643506|16643506 16649697|16650309 X + 16649248 16649355 3'utr mthl1 FlyBase G62242.1 CAACGTGCTTGAGTGACAATTGTATTATGTAGTAGAACTTCCAAAGTGTTCAGGCCAAAAGTAATTCTCCCCGAACTAAAGAGCGATCATACTGAGAATGAGTGATTA 21 16649286 0.966265809 8 21 117 1 1.380211242 0.083333333 0.142857143 0.25 21 0 0 24 X:16649248-16649355 6 mthl1 FBtr0340150|FBtr0074314 16643506|16643506 16650309|16649697 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" X + 16649249 16649356 3'utr mthl1 FlyBase G46999.1 AACGTGCTTGAGTGACAATTGTATTATGTAGTAGAACTTCCAAAGTGTTCAGGCCAAAAGTAATTCTCCCCGAACTAAAGAGCGATCATACTGAGAATGAGTGATTAC 14 16649286 0.963891352 9 14 77 1 1.255272505 0.277777778 0.285714286 0.444444444 14 0 0 18 X:16649249-16649356 6 9 5558 FBgn0030766 372.0033333 8.846666667 13.59666667 0.024193332 1.017332329 0.661926943 2 2 2 0.01 dme-miR-980-3p 6mer3-8 GGCAGC X 16649517 16649522 + X_16649517_16649522_+ 1 1 1 0 mthl1 FBtr0074314|FBtr0340150 16643506|16643506 16649697|16650309 X + 16649492 16649529 3'utr mthl1 FlyBase G62244.1 GAAATTATCGAATGACTGAGACAAAGGCAGCGAATACT 18 16649504 0.641068065 4 17 63 0.947368421 1.255272505 0.157894737 0.055555556 0.105263158 18 1 0 18 X:16649492-16649529 6 mthl1 FBtr0340150|FBtr0074314 16643506|16643506 16650309|16649697 GGCAGC 6mer3-8 dme-miR-980-3p X + 16649490 16649535 3'utr mthl1 FlyBase G47000.1 ATGAAATTATCGAATGACTGAGACAAAGGCAGCGAATACTTTATAC 10 16649496 0.698836802 4 8 48 0.846153846 1.041392685 0 0.2 0.384615385 10 2 0 11 X:16649490-16649535 6 9 5559 FBgn0030766 372.0033333 8.846666667 13.59666667 0.024193332 1.017332329 0.661926943 13 21 17 0.01 dme-miR-980-5p 7mer-A1 AAAAACA X 16653227 16653233 - X_16653227_16653233_- 0.782911824 0.782911824 0.782911824 0 CG9723 FBtr0074376 16653218 16653435 X - 16653220 16653320 3'utr CG9723 FlyBase G68244.1 AATATTTGTATAATCACTTGCAGACTGAACGGAAACACACATATTAATACAAATTATATATTTAATTATTCATGACTGGCTAGGAATAAAAACACTTATAC 83 16653249 0.942758062 15 70 496 0.81443299 1.2955671 0 0.13253012 0.257731959 83 15 3 79 X:16653220-16653320 7 CG9723 FBtr0074376 16653218 16653435 AAAAACA 7mer-A1 dme-miR-980-5p X - 16653228 16653267 3'utr CG9723 FlyBase G51359.1 TTATATATTTAATTATTCATGACTGGCTAGGAATAAAAAC 43 16653249 0.654258192 8 33 286 0.825396825 1.414973348 0 0.372093023 0.571428571 43 10 1 52 X:16653228-16653267 5 42.5 5560 FBgn0030768 232.3333333 16.26666667 24.68666667 0.182926829 2.612704918 1.7215771 16 16 16 0.01 dme-miR-305-3p 6mer2-7 TGTGCC X 1672884 1672889 + X_1672884_1672889_+ 1 1 1 0 hfw FBtr0070270|FBtr0333115 1672755|1672755 1673110|1673608 X + 1672794 1672911 3'utr hfw FlyBase G58037.2 AGACGGCCAGACTGTGACACAATCACATGACAGAGCGTATTCTCATACGTGTCCTACCTTTATATGTATCCGACTGTATCTGCGGAACCGTGTGCCTTCTATATTCATACATATGTGA 19 1672884 0.999979641 7 11 79 0.857142857 0.77815125 0.19047619 0.105263158 0.19047619 19 1 2 18 X:1672794-1672911 6 hfw FBtr0070270|FBtr0333115 1672755|1672755 1673110|1673608 TGTGCC 6mer2-7 dme-miR-305-3p X + 1672859 1672894 3'utr hfw FlyBase G43900.1 GTATCCGACTGTATCTGCGGAACCGTGTGCCTTCTA 8 1672870 0.696860347 4 8 39 1 1.176091259 0.333333333 0.375 0.666666667 8 0 0 15 X:1672859-1672894 6 5.5 5561 FBgn0001189 807.7733333 37.06333333 56.35333333 0.006808841 0.14839464 0.097598486 0 14 7 0.01 dme-miR-13b-2-5p 7mer-A1 TTGACGA X 1672955 1672961 + X_1672955_1672961_+ 0.782911824 0.782911824 0.782911824 0 hfw FBtr0070270|FBtr0333115 1672755|1672755 1673110|1673608 X + 1672914 1672976 3'utr hfw FlyBase G58037.3 GATTTTTGTGGTGTGTAGCCTTAAGAACAGTGTGCATGCACTTGACGATTTGTAGTGGGTGCG 18 1672926 0.892900993 7 13 141 0.80952381 0.929418926 0.333333333 0.166666667 0.285714286 18 3 1 17 X:1672914-1672976 7 hfw FBtr0070270|FBtr0333115 1672755|1672755 1673110|1673608 TTGACGA 7mer-A1 dme-miR-13b-2-5p X + 1672906 1672971 3'utr hfw FlyBase G43901.1 ATGTGAACGATTTTTGTGGTGTGTAGCCTTAAGAACAGTGTGCATGCACTTGACGATTTGTAGTGG 16 1672927 0.777720675 8 16 134 1 1.431363764 0.259259259 0.4375 0.666666667 16 0 0 27 X:1672906-1672971 7 5.5 5562 FBgn0001189 807.7733333 37.06333333 56.35333333 0.006808841 0.14839464 0.097598486 29 28 28.5 0.01 dme-miR-34-5p 7mer-m8 CACTGCC X 1673484 1673490 + X_1673484_1673490_+ 0.708953382 0.708953382 0.708953382 0 hfw FBtr0333115 1672755 1673608 X + 1673445 1673506 3'utr hfw FlyBase G58040.1 TTAAATATGTTGACTTGGTATTATTAGGGGACTCTTTAACACTGCCTTTCGCATAGGTTGTT 38 1673492 0.764482353 9 37 326 1 1.612783857 0.195121951 0.052631579 0.12195122 38 0 0 41 X:1673445-1673506 7 hfw FBtr0333115 1672755 1673608 CACTGCC 7mer-m8 dme-miR-34-5p X + 1673416 1673504 3'utr hfw FlyBase G43904.1 TGGCCACGTGCCCTGGTTTAACTTTATACTTAAATATGTTGACTTGGTATTATTAGGGGACTCTTTAACACTGCCTTTCGCATAGGTTG 30 1673492 0.986820923 12 29 256 0.975609756 1.602059991 0.219512195 0.333333333 0.512195122 30 1 0 40 X:1673416-1673504 7 26.5 5563 FBgn0001189 807.7733333 37.06333333 56.35333333 0.032806233 0.714992355 0.470247249 -8 -8 -8 0.01 dme-miR-8-3p 8mer-A1 CAGTATTA X 1674224 1674231 - X_1674224_1674231_- 0.671698124 0.671698124 0.671698124 0 CG32809 FBtr0308321|FBtr0333117|FBtr0333120|FBtr0333118|FBtr0308323|FBtr0333119|FBtr0308324 1673336|1673108|1673336|1673336|1673336|1673336|1673336 1675880|1675880|1675880|1677054|1675880|1675880|1677238 X - 1674202 1674267 3'utr CG32809 FlyBase G64043.1 ATTTGTTAACCTTACTGCCCGGCCAGTATTAGACTTCAGTATTATAGGCTAATTTACATTTAAATA 41 1674232 0.884651353 10 37 364 0.93877551 1.662757832 0.142857143 0.146341463 0.285714286 41 3 0 46 X:1674202-1674267 8 CG32809 FBtr0333120|FBtr0333117|FBtr0308321|FBtr0308324|FBtr0333119|FBtr0308323|FBtr0333118 1673336|1673108|1673336|1673336|1673336|1673336|1673336 1675880|1675880|1675880|1677238|1675880|1675880|1677054 CAGTATTA 8mer-A1 dme-miR-8-3p X - 1674179 1674282 3'utr CG32809 FlyBase G48272.1 CGTGCACACACATAGATTTGTTAACCTTACTGCCCGGCCAGTATTAGACTTCAGTATTATAGGCTAATTTACATTTAAATAAACTTGTAACACACGACTTGAGA 28 1674232 0.990554333 13 23 235 0.863636364 1.278753601 0.25 0.392857143 0.613636364 28 5 1 38 X:1674179-1674282 8 25 5564 FBgn0023531 281.8933333 6.233333333 9.576666667 0.088686028 4.010695187 2.61051166 1 1 1 0.01 dme-miR-14-3p 7mer-A1 AGACTGA X 1674797 1674803 - X_1674797_1674803_- 0.823311479 0.823336824 0.823324152 1.79E-05 CG32809 FBtr0308321|FBtr0333117|FBtr0333120|FBtr0333118|FBtr0308323|FBtr0333119|FBtr0308324 1673336|1673108|1673336|1673336|1673336|1673336|1673336 1675880|1675880|1675880|1677054|1675880|1675880|1677238 X - 1674770 1674827 3'utr CG32809 FlyBase G64044.1 ATTATTACCTTGGTATGGGACGTGAGACTGATAGTTCTATATATGTAGCTCATCAAGA 150 1674805 0.963442001 9 148 1182 0.993975904 2.217483944 0.409638554 0.093333333 0.180722892 150 1 0 165 X:1674770-1674827 7 CG32809 FBtr0333120|FBtr0333117|FBtr0308321|FBtr0308324|FBtr0333119|FBtr0308323|FBtr0333118 1673336|1673108|1673336|1673336|1673336|1673336|1673336 1675880|1675880|1675880|1677238|1675880|1675880|1677054 AGACTGA 7mer-A1 dme-miR-14-3p X - 1674779 1674826 3'utr CG32809 FlyBase G48273.1 TTATTACCTTGGTATGGGACGTGAGACTGATAGTTCTATATATGTAGC 102 1674805 0.957475816 6 95 848 0.90625 1.860338007 0.4375 0.421568627 0.63125 102 14 1 145 X:1674779-1674826 7 124.5 5565 FBgn0023531 281.8933333 6.233333333 9.576666667 0.441656419 19.97326203 13.00034807 2 2 2 0.01 dme-miR-282-5p 8mer-A1 AGAGGCTA X 16785427 16785434 - X_16785427_16785434_- 0.63790686 0.63790686 0.63790686 0 CG9609 FBtr0074356 16785113 16785478 X - 16785376 16785460 3'utr CG9609 FlyBase G68258.1 GGGACGGGAGTGAGAAGGTCTGGTCAAGAGGCTAACAATTGAATGACTACTTTAATTTAAACCACAACTTCTAAAAGAGAAACAA 28 16785438 0.967379161 10 26 140 0.933333333 1.447158031 0.366666667 0.035714286 0.1 28 2 0 28 X:16785376-16785460 8 CG9609 FBtr0074356 16785113 16785478 AGAGGCTA 8mer-A1 dme-miR-282-5p X - 16785390 16785456 3'utr CG9609 FlyBase G51372.1 CGGGAGTGAGAAGGTCTGGTCAAGAGGCTAACAATTGAATGACTACTTTAATTTAAACCACAACTTC 18 16785439 0.959681276 7 16 87 0.92 1.361727836 0.6 0.222222222 0.44 18 2 0 23 X:16785390-16785456 8 17.5 5566 FBgn0030787 206.1233333 13.74333333 21.09 0.084900626 1.273344652 0.829777146 4 5 4.5 0.01 dme-miR-14-3p 7mer-A1 AGACTGA X 16789595 16789601 + X_16789595_16789601_+ 0.823349562 0.823349562 0.823349562 0 Sap30 FBtr0074331|FBtr0344089 16788694|16788694 16789644|16789644 X + 16789562 16789616 3'utr Sap30 FlyBase G62279.1 GAATTACGCATTAAACGATTTATGTTAAAGCCTAGACTGATTTTAGCCATACATA 29 16789603 0.979262646 8 29 200 1 1.544068044 0.2 0.172413793 0.314285714 29 0 0 35 X:16789562-16789616 7 Sap30 FBtr0344089|FBtr0074331 16788694|16788694 16789644|16789644 AGACTGA 7mer-A1 dme-miR-14-3p X + 16789550 16789617 3'utr Sap30 FlyBase G47024.1 ACAAATCAATTGGAATTACGCATTAAACGATTTATGTTAAAGCCTAGACTGATTTTAGCCATACATAT 22 16789602 0.9864013 6 18 148 0.8125 0.937852093 0.09375 0.318181818 0.53125 22 4 2 26 X:16789550-16789617 7 24.5 5567 FBgn0030788 191.5866667 13.93666667 21.27333333 0.127879463 1.757952643 1.15167659 -8 -7 -7.5 0.01 dme-miR-999-3p 6mer3-8 AGTTAA X 16789653 16789658 - X_16789653_16789658_- 1 1 1 0 Rrp45 FBtr0074355|FBtr0344090 16789451|16789403 16789676|16789676 X - 16789635 16789690 stop_codon Rrp45 FlyBase G68264.1 AGCGATACATCTAGCCGTTGTGATAGTCGTGTAGTTAAGAGAAAATGCTTTCTATT 17 16789673 0.893303129 9 15 128 0.888888889 1.204119983 0.277777778 0.058823529 0.111111111 17 2 0 16 X:16789635-16789690 6 Rrp45 FBtr0344090|FBtr0074355 16789403|16789451 16789676|16789676 AGTTAA 6mer3-8 dme-miR-999-3p X - 16789635 16789691 stop_codon Rrp45 FlyBase G51375.1 AAGCGATACATCTAGCCGTTGTGATAGTCGTGTAGTTAAGAGAAAATGCTTTCTATT 15 16789673 0.701994757 8 15 118 1 1.322219295 0.095238095 0.333333333 0.523809524 15 0 0 21 X:16789635-16789691 6 10.5 5568 FBgn0030789 279.4133333 21.54333333 33.24666667 0.037578736 0.487389757 0.315821135 15 15 15 0.01 dme-miR-92b-3p 7mer-m1 TGCAATT X 16795331 16795337 + X_16795331_16795337_+ 0.765586663 0.765586663 0.765586663 0 CG4768 FBtr0074332|FBtr0347029|FBtr0305899 16795317|16795317|16795317 16796023|16797742|16796756 X + 16795322 16795407 3'utr CG4768 FlyBase G62286.1 ACAAGCAATTGCAATTGCGATCCCAGCCCAAAGCCAAGCTCCCGGTCACTAGGACACCATCTAGCTACTCCACCTCGTCTGATTAA 18 16795337 0.945019067 9 16 92 0.909090909 1.301029996 0.136363636 0.166666667 0.318181818 18 2 0 20 X:16795322-16795407 7 CG4768 FBtr0305899|FBtr0074332|FBtr0347029 16795317|16795317|16795317 16796756|16796023|16797742 TGCAATT 7mer-m1 dme-miR-92b-3p X + 16795267 16795454 stop_codon CG4768 FlyBase G47028.1 CGACAAAATGGACATTTGCCACTACAGTAGTAAACGCCAGCGCTTCATGTAATCCACAAGCAATTGCAATTGCGATCCCAGCCCAAAGCCAAGCTCCCGGTCACTAGGACACCATCTAGCTACTCCACCTCGTCTGATTAAAAATGAAAATGGAAATGAAAAGGAAAAATATAAAGGCCACTGCGAGC 29 16795337 0.959479877 15 26 126 0.955555556 1.33243846 0.222222222 0.448275862 0.644444444 29 1 1 43 X:16795267-16795454 7 6.5 5569 FBgn0030790 591.9266667 27.66333333 42.73 0.01098109 0.234968068 0.15211795 -6 -6 -6 0.01 dme-miR-1008-3p 7mer-m8 AGCTGTG X 16795818 16795824 + X_16795818_16795824_+ 0.671795832 0.671795832 0.671795832 0 CG4768 FBtr0074332|FBtr0347029|FBtr0305899 16795317|16795317|16795317 16796023|16797742|16796756 X + 16795702 16795875 3'utr CG4768 FlyBase G62289.1 AAGATGTTTATGTTATAAGGATAATGCCGATGGTGGGCACAAACTGTTAATCATTGTCATCATGCATTAATGCGAACGGAGTGAAAAGCTTAGGAGTACGATATCTGTTATATGCCAGCTGTGCGTCTGATTTACGATTACGATTAAGCGAAGCAGTAATAGTGAATGGTATTG 46 16795821 0.98572663 19 44 352 0.961538462 1.698970004 0.134615385 0.130434783 0.230769231 46 2 0 50 X:16795702-16795875 7 CG4768 FBtr0305899|FBtr0074332|FBtr0347029 16795317|16795317|16795317 16796756|16796023|16797742 AGCTGTG 7mer-m8 dme-miR-1008-3p X + 16795656 16795834 3'utr CG4768 FlyBase G47029.1 TTGATAGCACTTAAGAAAAAAGTCATGTCGATTGTAATGACACCAGAAGATGTTTATGTTATAAGGATAATGCCGATGGTGGGCACAAACTGTTAATCATTGTCATCATGCATTAATGCGAACGGAGTGAAAAGCTTAGGAGTACGATATCTGTTATATGCCAGCTGTGCGTCTGATTT 38 16795822 0.986139149 16 35 286 0.93220339 1.263241435 0.050847458 0.447368421 0.644067797 38 2 2 55 X:16795656-16795834 7 25.5 5570 FBgn0030790 591.9266667 27.66333333 42.73 0.043079661 0.921797807 0.596770419 -3 -4 -3.5 0.01 dme-miR-1008-3p 7mer-m8 AGCTGTG X 16795949 16795955 + X_16795949_16795955_+ 0.671795832 0.671795832 0.671795832 0 CG4768 FBtr0074332|FBtr0347029|FBtr0305899 16795317|16795317|16795317 16796023|16797742|16796756 X + 16795923 16795970 3'utr CG4768 FlyBase G62290.1 TTTTGCATTATGCAAACGACAAATGAAGCTGTGTAAATAACAACAAAA 48 16795946 0.875741007 4 44 204 0.945454545 1.238882089 0 0.125 0.236363636 48 1 2 52 X:16795923-16795970 7 CG4768 FBtr0305899|FBtr0074332|FBtr0347029 16795317|16795317|16795317 16796756|16796023|16797742 AGCTGTG 7mer-m8 dme-miR-1008-3p X + 16795923 16795970 3'utr CG4768 FlyBase G47031.1 TTTTGCATTATGCAAACGACAAATGAAGCTGTGTAAATAACAACAAAA 31 16795946 0.909399037 4 29 134 0.968253968 1.484299839 0.015873016 0.548387097 0.777777778 31 1 1 61 X:16795923-16795970 7 38 5571 FBgn0030790 591.9266667 27.66333333 42.73 0.064197142 1.373659477 0.889304938 3 3 3 0.01 dme-miR-307a-3p 6mer3-8 GGTTGT X 16798265 16798270 - X_16798265_16798270_- 1 1 1 0 CG9132 FBtr0074353|FBtr0074354|FBtr0306801 16796900|16797514|16797514 16798632|16798632|16798632 X - 16798250 16798359 3'utr CG9132 FlyBase G68271.1 CGTAGTTGCATCTCGCTCTAATTGAAGGAGTACGATGAGCGTGGGCAGAGTTCTCAGTGGGCGGGGATCTGTAGCGAACTATTTAGCCTGGTTGTTAATTGTATAAGTCA 38 16798277 0.935865827 13 31 257 0.829268293 1.230448921 0.390243902 0.078947368 0.146341463 38 6 1 34 X:16798250-16798359 6 CG9132 FBtr0306801|FBtr0074353|FBtr0074354 16797514|16796900|16797514 16798632|16798632|16798632 GGTTGT 6mer3-8 dme-miR-307a-3p X - 16798251 16798290 3'utr CG9132 FlyBase G51377.1 TGTAGCGAACTATTTAGCCTGGTTGTTAATTGTATAAGTC 13 16798271 0.77572534 5 13 126 1 1.301029996 0.05 0.384615385 0.6 13 0 0 20 X:16798251-16798290 6 14 5572 FBgn0030791 552.37 33.83666667 51.63333333 0.02534533 0.41375234 0.271142673 7 1 4 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT X 16798613 16798618 - X_16798613_16798618_- 1 1 1 0 CG9132 FBtr0074353|FBtr0074354|FBtr0306801 16796900|16797514|16797514 16798632|16798632|16798632 X - 16798560 16798628 3'utr CG9132 FlyBase G68273.1 ACATCATCCTGTTCCTCCTGCTGCTGCTGCTGCTGCGCTCCTATCACCCAGAACTTTATGTTTTAAGAC 19 16798619 0.765540447 8 17 152 0.888888889 0.903089987 0.074074074 0.315789474 0.518518519 19 1 2 24 X:16798560-16798628 6 CG9132 FBtr0306801|FBtr0074353|FBtr0074354 16797514|16796900|16797514 16798632|16798632|16798632 GTTCCT 6mer2-7 dme-miR-276a-3p X - 16798583 16798635 stop_codon CG9132 FlyBase G51379.1 TAGATATACATCATCCTGTTCCTCCTGCTGCTGCTGCTGCTGCGCTCCTATCA 7 16798621 0.91438085 5 6 48 0.777777778 0.84509804 0.222222222 0.285714286 0.444444444 7 2 0 7 X:16798583-16798635 6 8 5573 FBgn0030791 552.37 33.83666667 51.63333333 0.014483046 0.236429908 0.15493867 1 3 2 0.01 dme-miR-932-5p 6mer3-8 GGAATT X 16801983 16801988 - X_16801983_16801988_- 1 1 1 0 CG9125 FBtr0074352 16801927 16802036 X - 16801972 16802016 3'utr CG9125 FlyBase G68276.1 AAACAACAGCAAGTCTGATTTTATAATGGGAATTAATCGTTTCTT 9 16801999 0.963507159 3 8 46 1 1 0 0.111111111 0.2 9 0 0 10 X:16801972-16802016 6 CG9125 FBtr0074352 16801927 16802036 GGAATT 6mer3-8 dme-miR-932-5p X - 16801965 16802021 3'utr CG9125 FlyBase G51380.1 TTTCTAAACAACAGCAAGTCTGATTTTATAATGGGAATTAATCGTTTCTTTTTGTAA 12 16801998 0.949333294 5 11 98 0.956521739 1.342422681 0 0.583333333 0.782608696 12 1 0 22 X:16801965-16802021 6 3.5 5574 FBgn0030793 130.89 12.05333333 18.42 0.026740011 0.290376106 0.190010858 11 10 10.5 0.01 dme-miR-2b-2-5p 7mer-A1 TGAAGAA X 16805322 16805328 + X_16805322_16805328_+ 0.823349562 0.823349562 0.823349562 0 CG13005 FBtr0074334 16805279 16805754 X + 16805311 16805355 3'utr CG13005 FlyBase G62302.1 AGCAATGGAGATGAAGAATTCTATGATAGAGTGAAAGGTATTTCA 13 16805330 0.966689705 3 11 72 0.764705882 1.113943352 0.470588235 0.153846154 0.352941176 13 4 0 13 X:16805311-16805355 7 CG13005 FBtr0074334 16805279 16805754 TGAAGAA 7mer-A1 dme-miR-2b-2-5p X + 16805316 16805349 3'utr CG13005 FlyBase G47039.1 TGGAGATGAAGAATTCTATGATAGAGTGAAAGGT 6 16805330 0.745844132 2 6 36 1 0.77815125 0.666666667 0 0 6 0 0 6 X:16805316-16805349 7 9 5575 FBgn0030794 55.71666667 3.37 5.173333333 0.161531558 2.670623145 1.739690722 -8 -8 -8 0.01 dme-bantam-3p 6mer2-7 GATCTC X 16805519 16805524 + X_16805519_16805524_+ 1 1 1 0 CG13005 FBtr0074334 16805279 16805754 X + 16805505 16805535 3'utr CG13005 FlyBase G62303.1 AATATAGAAATAGGGATCTCTTAGATACATT 16 16805525 0.627584525 4 16 81 1 1.278753601 0.105263158 0.1875 0.315789474 16 0 0 19 X:16805505-16805535 6 CG13005 FBtr0074334 16805279 16805754 GATCTC 6mer2-7 dme-bantam-3p X + 16805500 16805531 3'utr CG13005 FlyBase G47040.1 ATGTAAATATAGAAATAGGGATCTCTTAGATA 10 16805525 0.661427968 3 10 51 1 1.041392685 0 0.1 0.181818182 10 0 0 11 X:16805500-16805531 6 12.5 5576 FBgn0030794 55.71666667 3.37 5.173333333 0.224349387 3.709198813 2.416237113 -6 -6 -6 0.01 dme-miR-304-5p 8mer-A1 TGAGATTA X 16826266 16826273 + X_16826266_16826273_+ 0.625363348 0.625363347 0.625363348 0 CG4829 FBtr0335278|FBtr0112994|FBtr0074336|FBtr0112995|FBtr0074338|FBtr0074337 16826137|16826137|16826137|16826137|16826137|16826137 16826494|16826494|16826494|16826494|16826494|16826494 X + 16826242 16826291 3'utr CG4829 FlyBase G62306.1 CACACACGCACGGAAACATTGCATTGAGATTAGAGTAGAACTGCCCGAAA 27 16826265 0.971224266 5 27 157 1 1.431363764 0.444444444 0 0 27 0 0 27 X:16826242-16826291 8 CG4829 FBtr0074338|FBtr0074337|FBtr0074336|FBtr0112995|FBtr0335278|FBtr0112994 16826137|16826137|16826137|16826137|16826137|16826137 16826494|16826494|16826494|16826494|16826494|16826494 TGAGATTA 8mer-A1 dme-miR-304-5p X + 16826241 16826285 3'utr CG4829 FlyBase G47043.1 ACACACACGCACGGAAACATTGCATTGAGATTAGAGTAGAACTGC 21 16826265 0.968202391 4 21 117 1 1.579783597 0.394736842 0.571428571 0.763157895 21 0 0 38 X:16826241-16826285 8 24 5577 FBgn0030796 2560.61 104.38 159.97 0.009372767 0.229929105 0.15002813 1 1 1 0.01 dme-miR-190-5p 7mer-A1 CATATCA X 16826932 16826938 - X_16826932_16826938_- 0.782911824 0.782911824 0.782911824 0 CG13004 FBtr0112996|FBtr0308682|FBtr0074351 16826679|16826679|16826679 16827398|16827398|16827398 X - 16826922 16827010 3'utr CG13004 FlyBase G68281.3 TGAAACGCACAGCATCTAGTCCAAAGTTGTATATAGCCGAAAAAGAAATAACGGAACCACACATGATGCGCTCATATCAGTTTTAAACA 134 16826946 0.881139966 8 131 525 0.974683544 1.886490725 0.202531646 0.171641791 0.297468354 134 3 1 154 X:16826922-16827010 7 CG13004 FBtr0112996|FBtr0074351|FBtr0308682 16826679|16826679|16826679 16827398|16827398|16827398 CATATCA 7mer-A1 dme-miR-190-5p X - 16826923 16826968 3'utr CG13004 FlyBase G51384.1 AAGAAATAACGGAACCACACATGATGCGCTCATATCAGTTTTAAAC 51 16826946 0.922457408 3 51 181 1 1.903089987 0.25 0.450980392 0.65 51 0 0 80 X:16826923-16826968 7 75 5578 FBgn0030797 333.0633333 17.96666667 27.55 0.225182398 4.174397032 2.722323049 8 8 8 0.01 dme-miR-304-5p 6mer2-7 GAGATT X 16827323 16827328 - X_16827323_16827328_- 1 1 1 0 CG13004 FBtr0112996|FBtr0308682|FBtr0074351 16826679|16826679|16826679 16827398|16827398|16827398 X - 16827252 16827391 3'utr CG13004 FlyBase G68283.1 GTGGTGGCGAGGGAGGGAGTTGAATGGAACTAATGGAGCAGTAGATGGAGGAGAGAGAATTAAGAGATTTTTTCCCAACTGGCAGCGCAACGGATTTCTGTACTTGACCCACTTAAAATAACCATATGCAAAAAAAACTG 633 16827321 0.983165853 23 560 4273 0.882014388 1.833217965 0.381294964 0.088467615 0.169784173 633 74 8 613 X:16827252-16827391 6 CG13004 FBtr0112996|FBtr0074351|FBtr0308682|FBtr0304152 16826679|16826679|16826679|16827115 16827398|16827398|16827398|16827398 GAGATT 6mer2-7 dme-miR-304-5p X - 16827224 16827389 3'utr CG13004 FlyBase G51388.1 GGTGGCGAGGGAGGGAGTTGAATGGAACTAATGGAGCAGTAGATGGAGGAGAGAGAATTAAGAGATTTTTTCCCAACTGGCAGCGCAACGGATTTCTGTACTTGACCCACTTAAAATAACCATATGCAAAAAAAACTGTAACAACGACATCGATAAGTGGTGTTCT 394 16827321 0.980725651 21 350 2543 0.881602914 1.906694111 0.43715847 0.314720812 0.508196721 394 60 5 484 X:16827224-16827389 6 394.5 5579 FBgn0030797 333.0633333 17.96666667 27.55 1.184459412 21.95732839 14.31941924 -7 -7 -7 0.01 dme-miR-999-3p 8mer-A1 AGTTAACA X 16885831 16885838 + X_16885831_16885838_+ 0.643926235 0.643926235 0.643926235 0 Rcp FBtr0074341 16885515 16885859 X + 16885804 16885846 3'utr Rcp FlyBase G62309.1 GGAACAGACAGGGAATGTATTATGCTTAGTTAACAATAAAGCT 11 16885823 0.98298179 2 11 86 1 1.041392685 0 0 0 11 0 0 11 X:16885804-16885846 8 Rcp FBtr0074341 16885515 16885859 AGTTAACA 8mer-A1 dme-miR-999-3p X + 16885802 16885839 3'utr Rcp FlyBase G47046.1 CTGGAACAGACAGGGAATGTATTATGCTTAGTTAACAA 6 16885823 0.983245378 3 6 46 1 1.079181246 0 0.833333333 0.916666667 6 0 0 12 X:16885802-16885839 8 7.5 5580 FBgn0030801 124.5266667 14.28333333 21.93 0.060228064 0.525087515 0.341997264 8 8 8 0.01 dme-miR-184-5p 6mer3-8 TGATAA X 16888280 16888285 + X_16888280_16888285_+ 1 1 1 0 CG4880 FBtr0074342|FBtr0310519 16888233|16888233 16888729|16888597 X + 16888251 16888289 3'utr CG4880 FlyBase G62315.1 ACGTTTTAGACAATTCTGCAAACCAGTCGTGATAAATTT 12 16888277 0.968174902 5 11 67 0.846153846 1.041392685 0 0.083333333 0.153846154 12 2 0 11 X:16888251-16888289 6 CG4880 FBtr0074342|FBtr0310519 16888233|16888233 16888729|16888597 TGATAA 6mer3-8 dme-miR-184-5p X + 16888251 16888290 3'utr CG4880 FlyBase G47049.1 ACGTTTTAGACAATTCTGCAAACCAGTCGTGATAAATTTA 8 16888278 0.781788114 5 8 58 1 1.146128036 0 0.5 0.714285714 8 0 0 14 X:16888251-16888290 6 9 5581 FBgn0030803 567.3333333 44.24666667 68.27666667 0.01586369 0.203405153 0.131816628 3 2 2.5 0.01 dme-miR-980-5p 7mer-m8 GAAAAAC X 16937021 16937027 + X_16937021_16937027_+ 0.705949576 0.705949576 0.705949576 0 CG4928 FBtr0074345|FBtr0074344 16936676|16936676 16938209|16937411 X + 16936943 16937060 5'utr CG4928 FlyBase G62328.1 GCGTTGCATACTTTTGTGGTTGTAGTTTTGTAGTAGAACATTTGTACCCCTCACCCACGAAAACCCGATCCTGCAAGAGAAAAACCATTTAGCTCAAAGTCCAACGGAGTTTGGCTTA 24 16937031 0.976583672 8 21 131 0.962962963 1.414973348 0.259259259 0.125 0.222222222 24 1 0 26 X:16936943-16937060 7 CG4928 FBtr0074345|FBtr0074344 16936676|16936676 16938209|16937411 GAAAAAC 7mer-m8 dme-miR-980-5p X + 16937005 16937064 5'utr CG4928 FlyBase G47055.1 ACCCGATCCTGCAAGAGAAAAACCATTTAGCTCAAAGTCCAACGGAGTTTGGCTTAACTT 9 16937031 0.970329506 3 7 40 0.909090909 1 0.090909091 0.222222222 0.363636364 9 1 0 10 X:16937005-16937064 7 8.5 5582 FBgn0027556 126.41 4.513333333 6.916666667 0.067241516 1.883308715 1.228915663 -10 -10 -10 0.01 dme-miR-317-3p 6mer3-8 TGTGTT X 16937154 16937159 + X_16937154_16937159_+ 1 1 1 0 CG4928 FBtr0074345|FBtr0074344 16936676|16936676 16938209|16937411 X + 16937144 16937178 5'utr CG4928 FlyBase G62329.1 AAATCCTTTGTGTGTTAGTCTAGGTGTAAGCACAC 5 16937157 0.720739342 3 4 41 1 0.84509804 0.285714286 0.2 0.428571429 5 0 0 7 X:16937144-16937178 6 CG4928 FBtr0074345|FBtr0074344 16936676|16936676 16938209|16937411 TGTGTT 6mer3-8 dme-miR-317-3p X + 16937141 16937171 5'utr CG4928 FlyBase G47056.1 TGCAAATCCTTTGTGTGTTAGTCTAGGTGTA 5 16937156 0.630679204 4 4 42 0.833333333 0.698970004 0.833333333 0.2 0.333333333 5 1 0 5 X:16937141-16937171 6 4 5583 FBgn0027556 126.41 4.513333333 6.916666667 0.031643066 0.886262925 0.578313253 -3 -2 -2.5 0.01 dme-miR-1003-3p 7mer-A1 TGTGAGA X 16938168 16938174 + X_16938168_16938174_+ 0.823349562 0.823349562 0.823349562 0 CG4928 FBtr0074345 16936676 16938209 X + 16938138 16938185 3'utr CG4928 FlyBase G62332.1 AATGGAAAAAATACACGCACATAACAAATTTGTGAGAAAAAAAATTAC 13 16938167 0.948106588 4 12 48 0.9375 1.176091259 0 0.230769231 0.375 13 1 0 15 X:16938138-16938185 7 CG4928 FBtr0074345 16936676 16938209 TGTGAGA 7mer-A1 dme-miR-1003-3p X + 16938152 16938183 3'utr CG4928 FlyBase G47058.1 ACGCACATAACAAATTTGTGAGAAAAAAAATT 12 16938166 0.919781942 2 12 49 1 1.278753601 0 0.333333333 0.578947368 12 0 0 19 X:16938152-16938183 7 11.5 5584 FBgn0027556 126.41 4.513333333 6.916666667 0.090973815 2.548005908 1.662650602 1 2 1.5 0.01 dme-miR-317-3p 6mer3-8 TGTGTT X 16938527 16938532 - X_16938527_16938532_- 0.986459886 0.679198465 0.832829176 0.21726662 wus FBtr0074418|FBtr0342974 16938494|16938242 16938752|16938752 X - 16938506 16938593 3'utr wus FlyBase G68308.1 TAGCTGTATCTGTTTCCACATGTATTTATTACCATAAATCTGCGTTGTTTATTGTCAAGACTGTGTTTAAAAATATTAAAGCACCCCA 7 16938555 0.986654004 5 7 73 1 1 0.1 0.285714286 0.5 7 0 0 10 X:16938506-16938593 6 wus FBtr0074418|FBtr0342974 16938494|16938242 16938752|16938752 TGTGTT 6mer3-8 dme-miR-317-3p X - 16938523 16938555 3'utr wus FlyBase G51402.1 TCTGCGTTGTTTATTGTCAAGACTGTGTTTAAA 5 16938530 0.805695826 2 5 48 1 0.698970004 0.2 0 0 5 0 0 5 X:16938523-16938555 6 4 5585 FBgn0030805 139 7.906666667 12.04333333 0.028776978 0.505902192 0.332133961 23 -2 10.5 0.01 dme-miR-277-3p 7mer-m8 TGCATTT X 16955511 16955517 + X_16955511_16955517_+ 0.620204266 0.620204266 0.620204266 0 RhoGAP15B FBtr0110990|FBtr0290096 16955463|16955463 16955995|16956234 X + 16955459 16955572 stop_codon RhoGAP15B FlyBase G62359.1 AAGTAGAAGTGCCCTCTCCCAGCTGCCAAACATAGATTTAACCGCCGTCTTGTGCATTTTTCTGTAGATATTCTGAATTTATTCGCAATATTAGGGAATATATACGTTTAGCAA 51 16955508 0.901497505 19 49 495 0.952380952 1.77815125 0.238095238 0.176470588 0.333333333 51 3 0 60 X:16955459-16955572 7 RhoGAP15B FBtr0290096|FBtr0110990 16955463|16955463 16956234|16955995 TGCATTT 7mer-m8 dme-miR-277-3p X + 16955464 16955600 3'utr RhoGAP15B FlyBase G47072.1 GAAGTGCCCTCTCCCAGCTGCCAAACATAGATTTAACCGCCGTCTTGTGCATTTTTCTGTAGATATTCTGAATTTATTCGCAATATTAGGGAATATATACGTTTAGCAATATTTTTACGAACAATTTCGGGAATTTT 36 16955508 0.989428055 14 32 353 0.927272727 1.40654018 0.145454545 0.416666667 0.618181818 36 3 1 51 X:16955464-16955600 7 31.5 5586 FBgn0030808 1485.72 31.16 47.79666667 0.021201842 1.010911425 0.659041774 3 3 3 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 16955677 16955682 + X_16955677_16955682_+ 1 1 1 0 RhoGAP15B FBtr0110990|FBtr0290096 16955463|16955463 16955995|16956234 X + 16955657 16955694 3'utr RhoGAP15B FlyBase G62360.1 ATAATCACGTTTGATCAAATACCAAATTGTACATAAGC 15 16955684 0.62908066 5 14 92 0.941176471 1.204119983 0.058823529 0.133333333 0.235294118 15 1 0 16 X:16955657-16955694 6 RhoGAP15B FBtr0290096|FBtr0110990 16955463|16955463 16956234|16955995 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 16955648 16955697 3'utr RhoGAP15B FlyBase G47073.1 TTTCTGTAAATAATCACGTTTGATCAAATACCAAATTGTACATAAGCTTA 10 16955684 0.981726887 5 10 74 1 1.255272505 0.055555556 0.6 0.777777778 10 0 0 18 X:16955648-16955697 6 12.5 5587 FBgn0030808 1485.72 31.16 47.79666667 0.008413429 0.401155327 0.261524514 -7 -7 -7 0.01 dme-miR-190-5p 8mer-m1 ACATATCT X 16955758 16955765 + X_16955758_16955765_+ 0.577627638 0.508036285 0.542831961 0.04920848 RhoGAP15B FBtr0110990|FBtr0290096 16955463|16955463 16955995|16956234 X + 16955720 16955770 3'utr RhoGAP15B FlyBase G62361.1 AGTATATGCCCTTTGTCTTCAACATAGCTCGATATCTGACATATCTAGTGT 15 16955745 0.986126358 6 9 116 0.666666667 0.77815125 0.222222222 0.133333333 0.277777778 15 5 1 12 X:16955720-16955770 8 RhoGAP15B FBtr0290096|FBtr0110990 16955463|16955463 16956234|16955995 ACATATCT 8mer-m1 dme-miR-190-5p X + 16955713 16955779 3'utr RhoGAP15B FlyBase G47074.1 ATATCTAAGTATATGCCCTTTGTCTTCAACATAGCTCGATATCTGACATATCTAGTGTTTATCTACA 18 16955732 0.984737045 8 10 136 0.615384615 0.602059991 0.230769231 0.333333333 0.538461538 18 7 3 16 X:16955713-16955779 8 8 5588 FBgn0030808 1485.72 31.16 47.79666667 0.005384595 0.256739409 0.167375689 13 26 19.5 0.01 dme-miR-283-5p 7mer-m8 TGATATT X 16956237 16956243 - X_16956237_16956243_- 0.620203677 0.620203677 0.620203677 0 CG9086 FBtr0346190 16956230 16957493 X - 16956234 16956262 3'utr CG9086 FlyBase G68314.1 AATAAATGCAACATTTTAGTGATATTCAA 14 16956248 0.72033572 6 13 107 0.947368421 1.255272505 0.210526316 0.285714286 0.473684211 14 1 0 18 X:16956234-16956262 7 CG9086 FBtr0346190 16956230 16957493 TGATATT 7mer-m8 dme-miR-283-5p X - 16956235 16956260 3'utr CG9086 FlyBase G51405.1 TAAATGCAACATTTTAGTGATATTCA 13 16956247 0.694127278 3 13 97 1 1.204119983 0.25 0.230769231 0.375 13 0 0 16 X:16956235-16956260 7 12.5 5589 FBgn0030809 889.67 15.31666667 23.47 0.014050153 0.816104461 0.532594802 5 4 4.5 0.01 dme-miR-13b-2-5p 6mer3-8 TTTGAC X 16956622 16956627 - X_16956622_16956627_- 1 1 1 0 CG9086 FBtr0346190 16956230 16957493 X - 16956529 16956639 3'utr CG9086 FlyBase G68316.1 TTCAGAGCCCTGTTTGACATCCATCTCACTCTAACCCGAGGAACTCGATAATATTAGTCAAACCATGTTTACTTGATCAATATACTTAACACCCTATACGACTATATATTT 15 16956625 0.984174298 10 14 102 0.9375 1.176091259 0.25 0.066666667 0.125 15 1 0 15 X:16956529-16956639 6 CG9086 FBtr0346190 16956230 16957493 TTTGAC 6mer3-8 dme-miR-13b-2-5p X - 16956607 16956654 3'utr CG9086 FlyBase G51407.1 ACAGACACCCTCTCTTTCAGAGCCCTGTTTGACATCCATCTCACTCTA 5 16956626 0.964289719 4 5 27 1 0.903089987 0 0.4 0.625 5 0 0 8 X:16956607-16956654 6 6 5590 FBgn0030809 889.67 15.31666667 23.47 0.006744074 0.391730141 0.255645505 -2 -1 -1.5 0.01 dme-miR-318-3p 7mer-m8 CCCAGTG X 16957121 16957127 - X_16957121_16957127_- 0.705949892 0.705949892 0.705949892 0 CG9086 FBtr0346190|FBtr0074415|FBtr0308839 16956230|16956943|16956943 16957493|16957493|16957493 X - 16957078 16957157 3'utr CG9086 FlyBase G68319.1 CGTTAGTAAACTTGTTGATAGTTTGAGCGGCCCAGTGCCCTCCTCTAGTTATATATATGTATGTGTATACATATATGCAT 10 16957146 0.984927168 6 10 92 1 1.113943352 0.307692308 0.3 0.461538462 10 0 0 13 X:16957078-16957157 7 CG9086 FBtr0074415|FBtr0308839|FBtr0346190 16956943|16956943|16956230 16957493|16957493|16957493 CCCAGTG 7mer-m8 dme-miR-318-3p X - 16957110 16957154 3'utr CG9086 FlyBase G51409.1 TAGTAAACTTGTTGATAGTTTGAGCGGCCCAGTGCCCTCCTCTAG 6 16957135 0.985263444 3 5 35 1 0.903089987 0 0.333333333 0.5 6 0 0 8 X:16957110-16957154 7 4.5 5591 FBgn0030809 889.67 15.31666667 23.47 0.005058055 0.293797606 0.191734129 19 8 13.5 0.01 dme-miR-970-3p 6mer3-8 TCTTAT X 16957206 16957211 - X_16957206_16957211_- 1 0.999999695 0.999999848 2.12E-07 CG9086 FBtr0346190|FBtr0074415|FBtr0308839 16956230|16956943|16956943 16957493|16957493|16957493 X - 16957158 16957314 3'utr CG9086 FlyBase G68320.1 CACCTCCATCCCACACAGTCAACGACACCAGCCACGAACACGCCATCACCACACAATCCTGTCCAGCGGCCCCCAAGCGGCAACTGTAACCATTGGTTGATTTTCTTATTAATTAATATTAATTGATAACAATATTCTTATTACTTTTTTGAGCTAT 25 16957221 0.986964334 10 22 198 0.931034483 1.130333768 0.068965517 0.08 0.206896552 25 1 1 27 X:16957158-16957314 6 CG9086 FBtr0074415|FBtr0308839|FBtr0346190 16956943|16956943|16956230 16957493|16957493|16957493 TCTTAT 6mer3-8 dme-miR-970-3p X - 16957195 16957275 3'utr CG9086 FlyBase G51410.1 ACGCCATCACCACACAATCCTGTCCAGCGGCCCCCAAGCGGCAACTGTAACCATTGGTTGATTTTCTTATTAATTAATATT 11 16957221 0.908069063 7 11 62 1 1.278753601 0.105263158 0.545454545 0.736842105 11 0 0 19 X:16957195-16957275 6 6 5592 FBgn0030809 889.67 15.31666667 23.47 0.006744074 0.391730141 0.255645505 10 10 10 0.01 dme-miR-308-3p 7mer-m1 TGTGATT X 16957424 16957430 - X_16957424_16957430_- 0.443131018 0.443131018 0.443131018 0 CG9086 FBtr0346190|FBtr0074415|FBtr0308839 16956230|16956943|16956943 16957493|16957493|16957493 X - 16957386 16957473 3'utr CG9086 FlyBase G68321.1 GGAAGCAGAGGACAGGCAGCAAAATGGAAATGGCGGCAGTCTATGTGATTATTACATACTAACATTAGGAGAGCCTATTTTTACGTCT 87 16957424 0.985897983 12 81 647 0.932038835 1.505149978 0.194174757 0.149425287 0.281553398 87 5 2 96 X:16957386-16957473 7 CG9086 FBtr0074415|FBtr0308839|FBtr0346190 16956943|16956943|16956230 16957493|16957493|16957493 TGTGATT 7mer-m1 dme-miR-308-3p X - 16957365 16957453 3'utr CG9086 FlyBase G51411.1 AAAATGGAAATGGCGGCAGTCTATGTGATTATTACATACTAACATTAGGAGAGCCTATTTTTACGTCTAAGCATTTTACTACTTATCCG 56 16957424 0.985419332 13 53 435 0.96 1.556302501 0.133333333 0.25 0.44 56 2 1 72 X:16957365-16957453 7 65.5 5593 FBgn0030809 889.67 15.31666667 23.47 0.073622804 4.276387378 2.790796762 -6 -6 -6 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC X 17070030 17070036 - X_17070030_17070036_- 0.661615645 0.661615645 0.661615645 0 CG8949 FBtr0074412|FBtr0304839|FBtr0304840|FBtr0310525|FBtr0330596|FBtr0310524 17069016|17069016|17068715|17069016|17069016|17069016 17070352|17070352|17070352|17070352|17070274|17070352 X - 17069947 17070055 3'utr CG8949 FlyBase G68347.1 AACCAGCCCGCGATTCACTTGTGTTCGGATCGAGTTCCAGTCCCCAACCGACTATATAGTGGCAGTATGTAACTGGCTGAGCGGACTGCATGGACTTGGCACAGGACAA 21 17070037 0.964459209 4 21 111 1 1.414973348 0.423076923 0.19047619 0.346153846 21 0 0 26 X:17069947-17070055 7 CG8949 FBtr0330596|FBtr0310524|FBtr0304840|FBtr0310525|FBtr0074412|FBtr0304839 17069016|17069016|17068715|17069016|17069016|17069016 17070274|17070352|17070352|17070352|17070352|17070352 TGTGTTC 7mer-m8 dme-miR-317-3p X - 17070025 17070051 3'utr CG8949 FlyBase G51430.1 AGCCCGCGATTCACTTGTGTTCGGATC 5 17070037 0.705140002 2 5 33 1 1 0.2 0.8 0.9 5 0 0 10 X:17070025-17070051 7 6.5 5594 FBgn0030812 1434.423333 38.19666667 58.95666667 0.004531438 0.170171917 0.110250466 1 1 1 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA X 17070257 17070262 - X_17070257_17070262_- 1 1 1 0 CG8949 FBtr0074412|FBtr0304839|FBtr0304840|FBtr0310525|FBtr0330596|FBtr0310524 17069016|17069016|17068715|17069016|17069016|17069016 17070352|17070352|17070352|17070352|17070274|17070352 X - 17070232 17070268 3'utr CG8949 FlyBase G68349.1 TTGCGATGATGATTGGTCGATTGTGGCCGCCGTCAGC 14 17070248 0.608820179 5 13 74 0.928571429 0.812913357 0.642857143 0 0 14 0 1 13 X:17070232-17070268 6 CG8949 FBtr0330596|FBtr0310524|FBtr0304840|FBtr0310525|FBtr0074412|FBtr0304839 17069016|17069016|17068715|17069016|17069016|17069016 17070274|17070352|17070352|17070352|17070352|17070352 TGATGA 6mer3-8 dme-miR-2a-2-5p X - 17070231 17070273 3'utr CG8949 FlyBase G51431.1 GATGATTGCGATGATGATTGGTCGATTGTGGCCGCCGTCAGCA 12 17070255 0.618461745 5 12 71 1 1.176091259 0.533333333 0.25 0.4 12 0 0 15 X:17070231-17070273 6 7.5 5595 FBgn0030812 1434.423333 38.19666667 58.95666667 0.005228582 0.196352212 0.127212077 -14 -7 -10.5 0.01 dme-miR-14-3p 7mer-m8 AAGACTG X 17079812 17079818 + X_17079812_17079818_+ 0.671795832 0.671795832 0.671795832 0 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 X + 17079767 17079843 3'utr CG4949 FlyBase G62366.1 AAAGCTGGAACGAATTTTCCAATCTCGAACGAATTTCGAGTTATTAAGACTGCATTTCCATTTTATTGACTTAAAGC 46 17079810 0.875800685 12 43 407 0.951612903 1.770852012 0.016129032 0.260869565 0.451612903 46 3 0 59 X:17079767-17079843 7 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 AAGACTG 7mer-m8 dme-miR-14-3p X + 17079797 17079844 3'utr CG4949 FlyBase G47078.1 GAATTTCGAGTTATTAAGACTGCATTTCCATTTTATTGACTTAAAGCT 22 17079810 0.988156665 7 21 191 0.931034483 0.954242509 0 0.318181818 0.482758621 22 0 2 27 X:17079797-17079844 7 29.5 5596 FBgn0030813 105.3333333 6.336666667 9.69 0.280063291 4.655444503 3.044375645 2 2 2 0.01 dme-miR-14-3p 6mer3-8 AAGACT X 17080072 17080077 + X_17080072_17080077_+ 1 1 1 0 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 X + 17080053 17080091 3'utr CG4949 FlyBase G62367.1 CGAATGCTCGATCAAATATAAGACTTTATTATAGTATAC 24 17080080 0.603818201 6 23 212 0.96875 1.190331698 0.03125 0.25 0.4375 24 0 1 31 X:17080053-17080091 6 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 AAGACT 6mer3-8 dme-miR-14-3p X + 17080045 17080091 3'utr CG4949 FlyBase G47079.1 GAAGCAATCGAATGCTCGATCAAATATAAGACTTTATTATAGTATAC 16 17080080 0.712191201 4 14 127 0.954545455 1.322219295 0.181818182 0.25 0.454545455 16 1 0 21 X:17080045-17080091 6 19 5597 FBgn0030813 105.3333333 6.336666667 9.69 0.180379747 2.998421883 1.960784314 -8 -8 -8 0.01 dme-miR-184-5p 6mer3-8 TGATAA X 17080134 17080139 + X_17080134_17080139_+ 1 1 1 0 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 X + 17080113 17080155 3'utr CG4949 FlyBase G62368.1 AAACTACCAAAAAAAAATTGCTGATAATTAATTATAATATACA 10 17080130 0.901672563 2 10 71 1 1.041392685 0 0.1 0.181818182 10 0 0 11 X:17080113-17080155 6 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 TGATAA 6mer3-8 dme-miR-184-5p X + 17080115 17080153 3'utr CG4949 FlyBase G47080.1 ACTACCAAAAAAAAATTGCTGATAATTAATTATAATATA 10 17080130 0.882737596 3 10 71 1 1.041392685 0 0.1 0.181818182 10 0 0 11 X:17080115-17080153 6 10 5598 FBgn0030813 105.3333333 6.336666667 9.69 0.094936709 1.578116781 1.031991744 4 4 4 0.01 dme-bantam-3p 8mer-A1 TGATCTCA X 17080449 17080456 + X_17080449_17080456_+ 0.631136379 0.631136385 0.631136382 0 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 X + 17080394 17080470 3'utr CG4949 FlyBase G62369.1 GATTGGAATCCGATCTCCGCATCCCAGCCTCATATGTAGTCCAGCATGCCGCTTATGATCTCAAAGGCATCCCGAGC 30 17080449 0.974939437 6 30 186 1 1.51851394 0.696969697 0.1 0.181818182 30 0 0 33 X:17080394-17080470 8 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 TGATCTCA 8mer-A1 dme-bantam-3p X + 17080429 17080460 3'utr CG4949 FlyBase G47081.1 GTAGTCCAGCATGCCGCTTATGATCTCAAAGG 10 17080448 0.689326875 3 9 61 0.9 1.255272505 0.7 0.7 0.85 10 2 0 18 X:17080429-17080460 8 19 5599 FBgn0030813 105.3333333 6.336666667 9.69 0.180379747 2.998421883 1.960784314 0 1 0.5 0.01 dme-bantam-3p 6mer2-7 GATCTC X 17080631 17080636 + X_17080631_17080636_+ 0.986663636 1 0.993331818 0.009430259 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 X + 17080609 17080647 3'utr CG4949 FlyBase G62370.1 AGGATTGGCAAGGTCGGATAAAGATCTCTATTATATTCT 15 17080638 0.64834602 5 14 107 0.894736842 1.230448921 0 0.2 0.368421053 15 2 0 17 X:17080609-17080647 6 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 GATCTC 6mer2-7 dme-bantam-3p X + 17080608 17080642 3'utr CG4949 FlyBase G47082.1 AAGGATTGGCAAGGTCGGATAAAGATCTCTATTAT 10 17080638 0.672865925 4 10 70 1 1.146128036 0 0.3 0.5 10 0 0 14 X:17080608-17080642 6 12 5600 FBgn0030813 105.3333333 6.336666667 9.69 0.113924051 1.893740137 1.238390093 -7 -7 -7 0.01 dme-miR-304-5p 7mer-m8 TGAGATT X 17135343 17135349 + X_17135343_17135349_+ 0.620191806 0.620090652 0.620141229 7.15E-05 CG5004 FBtr0302375|FBtr0346797|FBtr0343201|FBtr0302377|FBtr0074386|FBtr0302376 17135120|17135120|17135120|17135120|17135120|17135120 17135988|17135988|17135988|17135988|17135988|17135988 X + 17135272 17135396 3'utr CG5004 FlyBase G62388.2 AGCTGCTCAACAAGGACACGGGCAAAAGGAACCTAAAACTATCTTTTTTTTTTTGGCGAACTAACGAAATCTGAGATTTCAGAACTGGACCAAAGTCAAGAACGTATTTTTTAGACCTAAAAATT 51 17135342 0.944854379 18 44 247 0.893939394 1.16879202 0.333333333 0.196078431 0.378787879 51 4 3 59 X:17135272-17135396 7 CG5004 FBtr0074386|FBtr0302376|FBtr0343201|FBtr0302377|FBtr0302375|FBtr0346797 17135120|17135120|17135120|17135120|17135120|17135120 17135988|17135988|17135988|17135988|17135988|17135988 TGAGATT 7mer-m8 dme-miR-304-5p X + 17135328 17135392 3'utr CG5004 FlyBase G47092.1 CGAACTAACGAAATCTGAGATTTCAGAACTGGACCAAAGTCAAGAACGTATTTTTTAGACCTAAA 30 17135367 0.821591454 9 24 143 0.780487805 1.028028724 0.146341463 0.333333333 0.512195122 30 7 2 32 X:17135328-17135392 7 17.5 5601 FBgn0260748 2353.313333 97.35 148.4233333 0.007436324 0.179763739 0.11790599 1 -24 -11.5 0.01 dme-miR-980-5p 7mer-A1 AAAAACA X 17135473 17135479 + X_17135473_17135479_+ 0.782911824 0.782911824 0.782911824 0 CG5004 FBtr0302375|FBtr0346797|FBtr0343201|FBtr0302377|FBtr0074386|FBtr0302376 17135120|17135120|17135120|17135120|17135120|17135120 17135988|17135988|17135988|17135988|17135988|17135988 X + 17135444 17135528 3'utr CG5004 FlyBase G62390.1 ATGTCTAGATTTAGAAACGATTGTAAGTCAAAAACAGTCCCATGCTACTAACACCGCCATTCTAAAACCTAATCATACAACAGAT 100 17135486 0.722840128 13 86 467 0.901639344 2.041392685 0.049180328 0.13 0.286885246 100 12 0 110 X:17135444-17135528 7 CG5004 FBtr0074386|FBtr0302376|FBtr0343201|FBtr0302377|FBtr0302375|FBtr0346797 17135120|17135120|17135120|17135120|17135120|17135120 17135988|17135988|17135988|17135988|17135988|17135988 AAAAACA 7mer-A1 dme-miR-980-5p X + 17135436 17135602 3'utr CG5004 FlyBase G47093.1 CTATTTTTATGTCTAGATTTAGAAACGATTGTAAGTCAAAAACAGTCCCATGCTACTAACACCGCCATTCTAAAACCTAATCATACAACAGATTTTGAAATTCTTGCTTATTAGGACGGCCTGGTATCAAAGGCAAGCATCTATATGATCGCATATATATCATAAAC 102 17135486 0.770977062 24 86 542 0.882352941 2.130333768 0.091503268 0.382352941 0.588235294 102 18 0 135 X:17135436-17135602 7 55.5 5602 FBgn0260748 2353.313333 97.35 148.4233333 0.02358377 0.570107858 0.373930424 -13 -13 -13 0.01 dme-miR-1006-3p 7mer-A1 GAATTTA X 17135692 17135698 + X_17135692_17135698_+ 0.823349562 0.823349562 0.823349562 0 CG5004 FBtr0302375|FBtr0346797|FBtr0343201|FBtr0302377|FBtr0074386|FBtr0302376 17135120|17135120|17135120|17135120|17135120|17135120 17135988|17135988|17135988|17135988|17135988|17135988 X + 17135639 17135744 3'utr CG5004 FlyBase G62391.1 ACGATTTAAAAGTAACTACCAAAATGACTCTTGAACACTTGAAGTTTCATCGTGAATTTACCCAATAACGTTATAATATTGTATGCCTATCTATTATATTTTATGA 170 17135696 0.980405892 16 166 1211 0.980487805 2.002166062 0.112195122 0.182352941 0.32195122 170 3 1 201 X:17135639-17135744 7 CG5004 FBtr0074386|FBtr0302376|FBtr0343201|FBtr0302377|FBtr0302375|FBtr0346797 17135120|17135120|17135120|17135120|17135120|17135120 17135988|17135988|17135988|17135988|17135988|17135988 GAATTTA 7mer-A1 dme-miR-1006-3p X + 17135642 17135712 3'utr CG5004 FlyBase G47094.1 ATTTAAAAGTAACTACCAAAATGACTCTTGAACACTTGAAGTTTCATCGTGAATTTACCCAATAACGTTAT 135 17135696 0.749939276 11 135 972 1 2.28780173 0.077319588 0.340740741 0.541237113 135 0 0 194 X:17135642-17135712 7 106.5 5603 FBgn0260748 2353.313333 97.35 148.4233333 0.045255342 1.093990755 0.717542165 -4 -4 -4 0.01 dme-miR-14-3p 6mer3-8 AAGACT X 17135834 17135839 + X_17135834_17135839_+ 1 1 1 0 CG5004 FBtr0302375|FBtr0346797|FBtr0343201|FBtr0302377|FBtr0074386|FBtr0302376 17135120|17135120|17135120|17135120|17135120|17135120 17135988|17135988|17135988|17135988|17135988|17135988 X + 17135769 17135904 3'utr CG5004 FlyBase G62392.1 ATGTATAATTGGTACAATCCAATCGAGAGATAGGGGGGTCAAATTATTTGCCCATCGCTACGCGTAAGACTAAAACTGAACGATTTGCTCAGGCAGCTGGAAAGGATAATCAAAAGCAAGAGAATAACTGAGAAAC 244 17135833 0.905640922 17 229 1028 0.92936803 1.698970004 0.226765799 0.094262295 0.178438662 244 15 4 250 X:17135769-17135904 6 CG5004 FBtr0074386|FBtr0302376|FBtr0343201|FBtr0302377|FBtr0302375|FBtr0346797 17135120|17135120|17135120|17135120|17135120|17135120 17135988|17135988|17135988|17135988|17135988|17135988 AAGACT 6mer3-8 dme-miR-14-3p X + 17135816 17135915 3'utr CG5004 FlyBase G47095.2 TTGCCCATCGCTACGCGTAAGACTAAAACTGAACGATTTGCTCAGGCAGCTGGAAAGGATAATCAAAAGCAAGAGAATAACTGAGAAACACTAAACTAAT 174 17135833 0.94779885 12 157 666 0.908088235 1.489606966 0.319852941 0.41954023 0.628676471 174 18 7 247 X:17135816-17135915 6 139.5 5604 FBgn0260748 2353.313333 97.35 148.4233333 0.059278124 1.432973806 0.939879174 1 1 1 0.01 dme-miR-317-5p 6mer2-7 TATCCC X 17150398 17150403 + X_17150398_17150403_+ 1 1 1 0 CG5010 FBtr0343291|FBtr0074387 17150298|17150298 17150647|17150647 X + 17150277 17150526 stop_codon CG5010 FlyBase G62399.1 AGCAGAGCCACCATCTCCAGTAGAGGGCCCAGCTCCGGTAGAATATCATCTGGCCAAGCACCGGCGGATGAACGCAGCCGGATGAACCCATCGGATGAACACCTCCGGATGAACTCTGTCCTATCCCTTCGTTTAGTTCTTAATTGTTTAATTGCAAGCATCTGAAAGAAAGCATTGTTTAATTGTAGTGCAAAATGAAATGTTAAATAGAAAATCCCGTTGGCAGCCCAAAACCCTTTCCAAAAAAAAA 111 17150398 0.999986539 32 107 651 0.965034965 2.139879086 0.251748252 0.198198198 0.377622378 111 5 0 138 X:17150277-17150526 6 CG5010 FBtr0343291|FBtr0074387 17150298|17150298 17150647|17150647 TATCCC 6mer2-7 dme-miR-317-5p X + 17150352 17150423 3'utr CG5010 FlyBase G47099.1 AGCCGGATGAACCCATCGGATGAACACCTCCGGATGAACTCTGTCCTATCCCTTCGTTTAGTTCTTAATTGT 34 17150398 0.982637935 11 31 228 0.928571429 1.716003344 0.035714286 0.382352941 0.625 34 4 0 52 X:17150352-17150423 6 32.5 5605 FBgn0260747 667.7266667 81.68 125.22 0.048672611 0.397894221 0.259543204 0 0 0 0.01 dme-miR-307a-3p 6mer3-8 GGTTGT X 17150565 17150570 + X_17150565_17150570_+ 1 1 1 0 CG5010 FBtr0343291|FBtr0074387 17150298|17150298 17150647|17150647 X + 17150557 17150581 3'utr CG5010 FlyBase G62400.1 ACCCCACGGGTTGTCAATGTGGGCC 8 17150574 0.719848345 3 8 32 1 1.041392685 0.181818182 0.375 0.545454545 8 0 0 11 X:17150557-17150581 6 CG5010 FBtr0343291|FBtr0074387 17150298|17150298 17150647|17150647 GGTTGT 6mer3-8 dme-miR-307a-3p X + 17150555 17150582 3'utr CG5010 FlyBase G47101.1 AAACCCCACGGGTTGTCAATGTGGGCCA 6 17150575 0.91550546 2 6 24 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 X:17150555-17150582 6 7 5606 FBgn0260747 667.7266667 81.68 125.22 0.010483332 0.085700294 0.055901613 -9 -10 -9.5 0.01 dme-bantam-3p 6mer2-7 GATCTC X 17241495 17241500 - X_17241495_17241500_- 1 1 1 0 CG8915 FBtr0339780|FBtr0074447 17240466|17241265 17241817|17241817 X - 17241434 17241521 3'utr CG8915 FlyBase G68396.1 ACTTATTCGAATATTTAACGAGATCTCTGCGCATTATTCCCTGAAATGTGTCGGGCAAGAACTTATGGTCCCTGCTTTGATTTCCATT 29 17241494 0.976213055 6 29 187 1 1.612783857 0.048780488 0.310344828 0.512195122 29 0 0 41 X:17241434-17241521 6 CG8915 FBtr0339780|FBtr0074447 17240466|17241265 17241817|17241817 GATCTC 6mer2-7 dme-bantam-3p X - 17241458 17241517 3'utr CG8915 FlyBase G51461.1 ATTCGAATATTTAACGAGATCTCTGCGCATTATTCCCTGAAATGTGTCGGGCAAGAACTT 13 17241494 0.978374742 5 13 93 1 1.342422681 0.136363636 0.461538462 0.681818182 13 0 0 22 X:17241458-17241517 6 19 5607 FBgn0030833 168.33 5.216666667 8 0.112873522 3.642172524 2.375 -6 -6 -6 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 17241577 17241583 - X_17241577_17241583_- 0.468235798 0.41947209 0.443853944 0.034481143 CG8915 FBtr0339780|FBtr0339780|FBtr0339780|FBtr0074447|FBtr0074447|FBtr0074447 17240466|17240466|17240466|17241265|17241265|17241265 17241817|17241817|17241817|17241817|17241817|17241817 X - 17241563 17241657 3'utr CG8915 FlyBase G68397.1 TCCACTGCACTTCTTACATATTAAGGTATATCTAAGGTAGCACACACGATATCTTAACTATATTCCTTACATGTTGTGATACAAGAAGGCGCAAA 84 17241584 0.95910057 9 77 554 0.907407407 1.146128036 0.018518519 0.238095238 0.407407407 84 4 6 98 X:17241563-17241657 7 CG8915 FBtr0339780|FBtr0339780|FBtr0339780|FBtr0074447|FBtr0074447|FBtr0074447 17240466|17240466|17240466|17241265|17241265|17241265 17241817|17241817|17241817|17241817|17241817|17241817 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 17241565 17241623 3'utr CG8915 FlyBase G51462.1 AGGTAGCACACACGATATCTTAACTATATTCCTTACATGTTGTGATACAAGAAGGCGCA 54 17241585 0.981921612 9 48 364 0.87654321 0.897015839 0 0.388888889 0.592592593 54 2 8 71 X:17241565-17241623 7 64 5608 FBgn0030833 168.33 5.216666667 8 0.380205549 12.26837061 8 1 2 1.5 0.01 dme-miR-79-3p 7mer-A1 AGCTTTA X 17305161 17305167 + X_17305161_17305167_+ 0.823349562 0.823349562 0.823349562 0 CG5445 FBtr0074427|FBtr0074428|FBtr0339777|FBtr0339778|FBtr0074425 17304836|17304836|17304836|17304836|17304836 17305475|17305475|17305475|17305475|17305475 X + 17305144 17305198 3'utr CG5445 FlyBase G62414.1 TCGGTGTCAGACAGATCAGCTTTATATATATATATCGATATGTCGCGAAGGGAGC 23 17305159 0.97624235 6 18 164 0.848484848 1.447158031 0.121212121 0.347826087 0.545454545 23 5 0 28 X:17305144-17305198 7 CG5445 FBtr0339778|FBtr0074425|FBtr0074428|FBtr0339777|FBtr0074427 17304836|17304836|17304836|17304836|17304836 17305475|17305475|17305475|17305475|17305475 AGCTTTA 7mer-A1 dme-miR-79-3p X + 17305131 17305189 3'utr CG5445 FlyBase G47110.1 CCACTCCTTAATTTCGGTGTCAGACAGATCAGCTTTATATATATATATCGATATGTCGC 10 17305159 0.985392029 4 10 83 1 1.113943352 0.153846154 0.3 0.461538462 10 0 0 13 X:17305131-17305189 7 14.5 5609 FBgn0030838 342.0933333 22.24 33.86 0.042386093 0.651978417 0.428233904 2 2 2 0.01 dme-miR-980-5p 6mer3-8 GAAAAA X 17305445 17305450 + X_17305445_17305450_+ 1 1 1 0 CG5445 FBtr0074427|FBtr0074428|FBtr0339777|FBtr0339778|FBtr0074425 17304836|17304836|17304836|17304836|17304836 17305475|17305475|17305475|17305475|17305475 X + 17305431 17305477 3'utr CG5445 FlyBase G62416.1 AAGTGTTTTATTGAGAAAAAATAAGAATGAAGCAGAAGGATTAAGAA 108 17305452 0.961475201 4 99 355 0.939655172 1.736396502 0.301724138 0.074074074 0.137931034 108 6 1 109 X:17305431-17305477 6 CG5445 FBtr0339778|FBtr0074425|FBtr0074428|FBtr0339777|FBtr0074427 17304836|17304836|17304836|17304836|17304836 17305475|17305475|17305475|17305475|17305475 GAAAAA 6mer3-8 dme-miR-980-5p X + 17305400 17305478 3'utr CG5445 FlyBase G47112.1 AAGCTAAGAAACGTGTAACAAAATTAGATCTAAGTGTTTTATTGAGAAAAAATAAGAATGAAGCAGAAGGATTAAGAAA 67 17305452 0.933633773 7 63 216 0.950980392 1.986771734 0.323529412 0.358208955 0.578431373 67 5 0 97 X:17305400-17305478 6 82.5 5610 FBgn0030838 342.0933333 22.24 33.86 0.241162256 3.709532374 2.436503249 -7 -7 -7 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT X 17456851 17456857 - X_17456851_17456857_- 0.658999527 0.658999527 0.658999527 0 CG43658 FBtr0310336|FBtr0310337|FBtr0342803|FBtr0342802|FBtr0310338|FBtr0310339|FBtr0310335|FBtr0330597 17456555|17456555|17456555|17456555|17456555|17456167|17456555|17456555 17458220|17458220|17458220|17457905|17458220|17458220|17458220|17457905 X - 17456836 17456916 3'utr CG43658 FlyBase G68422.1 CGACCATGTGCAGCACTTCTTATCGGTTTTTCTCAAGCTTTTCGAAGCGAAAACTCTGAGGCAGCTGGCAGCACTTTCCTT 16 17456861 0.942799889 6 15 67 0.944444444 1.230448921 0.166666667 0.125 0.222222222 16 1 0 17 X:17456836-17456916 7 CG43658 FBtr0342802|FBtr0342803|FBtr0310337|FBtr0310336|FBtr0330597|FBtr0310335|FBtr0310339|FBtr0310338 17456555|17456555|17456555|17456555|17456555|17456555|17456167|17456555 17457905|17458220|17458220|17458220|17457905|17458220|17458220|17458220 GGCAGCT 7mer-m8 dme-miR-980-3p X - 17456841 17456873 3'utr CG43658 FlyBase G51474.1 GAAGCGAAAACTCTGAGGCAGCTGGCAGCACTT 6 17456861 0.793668973 2 6 14 1 0.903089987 0.5 0.166666667 0.375 6 0 0 8 X:17456841-17456873 7 10 5611 FBgn0263706 341.6233333 5.406666667 8.273333333 0.029272005 1.849568434 1.208702659 4 4 4 0.01 dme-miR-33-5p 7mer-A1 AATGCAA X 17456938 17456944 - X_17456938_17456944_- 0.782911824 0.782911824 0.782911824 0 CG43658 FBtr0310336|FBtr0310337|FBtr0342803|FBtr0342802|FBtr0310338|FBtr0310339|FBtr0310335|FBtr0330597 17456555|17456555|17456555|17456555|17456555|17456167|17456555|17456555 17458220|17458220|17458220|17457905|17458220|17458220|17458220|17457905 X - 17456934 17456998 3'utr CG43658 FlyBase G68423.1 GTTATCCGGGAAACTGTCGAAGGAGCAGGACTTGTGGATGGAGTGCGACATGGTAATGCAAATGG 9 17456963 0.969799589 6 8 45 0.8 0.903089987 0.5 0.111111111 0.2 9 2 0 8 X:17456934-17456998 7 CG43658 FBtr0342802|FBtr0342803|FBtr0310337|FBtr0310336|FBtr0330597|FBtr0310335|FBtr0310339|FBtr0310338 17456555|17456555|17456555|17456555|17456555|17456555|17456167|17456555 17457905|17458220|17458220|17458220|17457905|17458220|17458220|17458220 AATGCAA 7mer-A1 dme-miR-33-5p X - 17456920 17457005 3'utr CG43658 FlyBase G51475.1 TTGTTTAGTTATCCGGGAAACTGTCGAAGGAGCAGGACTTGTGGATGGAGTGCGACATGGTAATGCAAATGGTTATTTGGCCCATT 12 17456960 0.978494555 6 10 77 0.875 1.146128036 0.1875 0.25 0.4375 12 2 0 14 X:17456920-17457005 7 4.5 5612 FBgn0263706 341.6233333 5.406666667 8.273333333 0.013172402 0.832305795 0.543916197 19 16 17.5 0.01 dme-miR-31a-5p 6mer3-8 TCTTGC X 17457245 17457250 - X_17457245_17457250_- 1 1 1 0 CG43658 FBtr0310336|FBtr0310337|FBtr0342803|FBtr0342802|FBtr0310338|FBtr0310339|FBtr0310335|FBtr0330597 17456555|17456555|17456555|17456555|17456555|17456167|17456555|17456555 17458220|17458220|17458220|17457905|17458220|17458220|17458220|17457905 X - 17457211 17457318 3'utr CG43658 FlyBase G68424.1 AGAAACCTAGTGTTTAGTCAAGTGTTTTCTCAAACTTGAGCAGCCAACTATCTCTTTTTGTTCTCGATTCTTGCGTTAGAATGTGAAACTTAGCCCTAGGGAAATGTT 44 17457262 0.862991313 14 40 359 0.923076923 1.681241237 0.346153846 0.136363636 0.269230769 44 4 0 48 X:17457211-17457318 6 CG43658 FBtr0342802|FBtr0342803|FBtr0310337|FBtr0310336|FBtr0330597|FBtr0310335|FBtr0310339|FBtr0310338 17456555|17456555|17456555|17456555|17456555|17456555|17456167|17456555 17457905|17458220|17458220|17458220|17457905|17458220|17458220|17458220 TCTTGC 6mer3-8 dme-miR-31a-5p X - 17457216 17457287 3'utr CG43658 FlyBase G51477.1 AAACTTGAGCAGCCAACTATCTCTTTTTGTTCTCGATTCTTGCGTTAGAATGTGAAACTTAGCCCTAGGGAA 22 17457262 0.889816588 8 20 193 0.944444444 1.531478917 0.222222222 0.5 0.694444444 22 2 0 34 X:17457216-17457287 6 16 5613 FBgn0263706 341.6233333 5.406666667 8.273333333 0.046835208 2.959309494 1.933924255 12 12 12 0.01 dme-miR-980-5p 6mer2-7 AAAAAC X 17457839 17457844 - X_17457839_17457844_- 1 1 1 0 CG43658 FBtr0310336|FBtr0310337|FBtr0342803|FBtr0342802|FBtr0310338|FBtr0310339|FBtr0310335|FBtr0330597 17456555|17456555|17456555|17456555|17456555|17456167|17456555|17456555 17458220|17458220|17458220|17457905|17458220|17458220|17458220|17457905 X - 17457843 17457883 3'utr CG43658 FlyBase G68425.1 GAAATTTAGTTTGTAGCACATAGACTTACGTTTAGGCTCAA 24 17457860 0.799462424 5 22 187 0.931034483 1.431363764 0.137931034 0.166666667 0.310344828 24 2 0 27 X:17457843-17457883 1 CG43658 FBtr0342802|FBtr0342803|FBtr0310337|FBtr0310336|FBtr0330597|FBtr0310335|FBtr0310339|FBtr0310338 17456555|17456555|17456555|17456555|17456555|17456555|17456167|17456555 17457905|17458220|17458220|17458220|17457905|17458220|17458220|17458220 AAAAAC 6mer2-7 dme-miR-980-5p X - 17457830 17457885 3'utr CG43658 FlyBase G51478.1 TCGAAATTTAGTTTGTAGCACATAGACTTACGTTTAGGCTCAAAAACCGGCGGCCA 18 17457861 0.985131916 7 17 138 0.962962963 1.414973348 0.037037037 0.333333333 0.555555556 18 1 0 26 X:17457830-17457885 6 2.5 5614 FBgn0263706 341.6233333 5.406666667 8.273333333 0.007318001 0.462392109 0.302175665 16 17 16.5 0.01 dme-miR-970-3p 6mer2-7 CTTATG X 17605918 17605923 + X_17605918_17605923_+ 1 1 1 0 X11L FBtr0340620|FBtr0340621|FBtr0333757|FBtr0301696|FBtr0074451 17605308|17605308|17605308|17605308|17605308 17606100|17606879|17606100|17606879|17606100 X + 17605898 17605951 3'utr X11L FlyBase G62436.1 AGAAACAAAAAGCAACACACCTTATGCCAAAAAAGATTAGATTTCGTTAAACTT 60 17605922 0.946270296 5 58 245 0.971428571 1.832508913 0.057142857 0.166666667 0.285714286 60 2 0 68 X:17605898-17605951 6 X11L FBtr0340621|FBtr0333757|FBtr0301696|FBtr0074451|FBtr0340620 17605308|17605308|17605308|17605308|17605308 17606879|17606100|17606879|17606100|17606100 CTTATG 6mer2-7 dme-miR-970-3p X + 17605903 17606025 3'utr X11L FlyBase G47123.1 CAAAAAGCAACACACCTTATGCCAAAAAAGATTAGATTTCGTTAAACTTATTATTGTATAGAGCCATTGCGGATAATTATTGCAATACCATTACCGATATTTATTATTAAAAATAGCCTTAGA 44 17605922 0.963866018 9 42 224 0.948275862 1.740362689 0.189655172 0.272727273 0.448275862 44 3 0 55 X:17605903-17606025 6 42 5615 FBgn0026313 772.0566667 18.08 27.68333333 0.054400152 2.32300885 1.517158338 -4 -4 -4 0.01 dme-miR-8-3p 7mer-m8 CAGTATT X 17623353 17623359 - X_17623353_17623359_- 0.661615243 0.661615243 0.661615243 0 stas FBtr0074487 17623219 17623694 X - 17623328 17623423 3'utr stas FlyBase G68462.1 ACTTTTGCATCATATATTTCCATCAATCGTTTTTAAGTTAGTGAATTTTTGTTTAGTGCTATTGCAGTATTTACTAGAAAAGTTCTCCTCTAAGTA 112 17623362 0.83031074 8 111 1260 0.9921875 2.103803721 0.234375 0.142857143 0.25 112 1 0 127 X:17623328-17623423 7 stas FBtr0074487 17623219 17623694 CAGTATT 7mer-m8 dme-miR-8-3p X - 17623333 17623538 3'utr stas FlyBase G51501.1 TTTTCGGAATGCCACTTTGGGTCTCGATCCACTATGTTTAAGACAACTACAAAATATCTGTGTTTATCCTATTATTAAAATTATTAATGTTTTCTGAACTTGTTCTTACCAAACAACTTTTGCATCATATATTTCCATCAATCGTTTTTAAGTTAGTGAATTTTTGTTTAGTGCTATTGCAGTATTTACTAGAAAAGTTCTCCTCT 110 17623362 0.990887901 21 104 1104 0.957055215 2.193124598 0.214723926 0.327272727 0.54601227 110 7 0 156 X:17623333-17623538 7 81.5 5616 FBgn0030850 1912.336667 122.8733333 188.6933333 0.042618019 0.663284683 0.43191775 3 3 3 0.01 dme-miR-305-3p 6mer3-8 ATGTGC X 17640474 17640479 - X_17640474_17640479_- 1 1 1 0 RhoGAPp190 FBtr0333661|FBtr0333659|FBtr0333662|FBtr0333660|FBtr0074482|FBtr0074483 17639145|17639145|17639145|17639145|17639145|17639145 17641617|17641617|17641617|17641617|17641617|17641617 X - 17640449 17640503 3'utr RhoGAPp190 FlyBase G68487.1 AATCTAATTTTCGAGCTAAACTAAATGTGCATCTCAGTGTGTGTGTCTGTCTGTA 61 17640477 0.870920746 7 57 547 0.944444444 1.531478917 0.277777778 0.163934426 0.291666667 61 3 1 68 X:17640449-17640503 6 RhoGAPp190 FBtr0333660|FBtr0333662|FBtr0074483|FBtr0074482|FBtr0333659|FBtr0333661 17639145|17639145|17639145|17639145|17639145|17639145 17641617|17641617|17641617|17641617|17641617|17641617 ATGTGC 6mer3-8 dme-miR-305-3p X - 17640449 17640493 3'utr RhoGAPp190 FlyBase G51518.1 TCGAGCTAAACTAAATGTGCATCTCAGTGTGTGTGTCTGTCTGTA 21 17640476 0.833026673 3 20 193 0.970588235 1.51851394 0.294117647 0.476190476 0.676470588 21 1 0 33 X:17640449-17640493 6 38 5617 FBgn0026375 866.7733333 14.19333333 21.75666667 0.043840758 2.677313293 1.746591083 -2 -3 -2.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT X 17640635 17640640 - X_17640635_17640640_- 1 1 1 0 RhoGAPp190 FBtr0074481|FBtr0333661|FBtr0333659|FBtr0333662|FBtr0333660|FBtr0074482|FBtr0074483 17640504|17639145|17639145|17639145|17639145|17639145|17639145 17641617|17641617|17641617|17641617|17641617|17641617|17641617 X - 17640573 17640664 3'utr RhoGAPp190 FlyBase G68488.1 TAAATACCACTAAATGTCTGTGTGTCTAGTATAGGAGAAAGTAGGAGAGGTGGAGCCGTAGGAGCAGGGGGAGGGGGAGAGAAAGGATGAGC 18 17640641 0.984977476 9 17 128 0.95 1.278753601 0.25 0.111111111 0.2 18 1 0 19 X:17640573-17640664 6 RhoGAPp190 FBtr0333660|FBtr0333662|FBtr0074483|FBtr0074482|FBtr0074481|FBtr0333659|FBtr0333661 17639145|17639145|17639145|17639145|17640504|17639145|17639145 17641617|17641617|17641617|17641617|17641617|17641617|17641617 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" X - 17640566 17640665 3'utr RhoGAPp190 FlyBase G51519.1 TTAAATACCACTAAATGTCTGTGTGTCTAGTATAGGAGAAAGTAGGAGAGGTGGAGCCGTAGGAGCAGGGGGAGGGGGAGAGAAAGGATGAGCGAAGCGA 8 17640640 0.9804256 5 8 53 1 1.176091259 0.4 0.625 0.8 8 0 0 15 X:17640566-17640665 6 10.5 5618 FBgn0026375 866.7733333 14.19333333 21.75666667 0.012113894 0.739783936 0.482610694 1 0 0.5 0.01 dme-miR-968-5p 6mer2-7 CTACTT X 17641575 17641580 - X_17641575_17641580_- 0.999999939 0.99892608 0.999463009 0.000759291 RhoGAPp190 FBtr0074481|FBtr0333661|FBtr0333659|FBtr0333662|FBtr0333660|FBtr0074482|FBtr0074483 17640504|17639145|17639145|17639145|17639145|17639145|17639145 17641617|17641617|17641617|17641617|17641617|17641617|17641617 X - 17641563 17641693 stop_codon RhoGAPp190 FlyBase G68494.1 GGAGGACATTGTCCAGACAATGATTGACCAGTTCCCGTATCTGTTCTGCGGCAAGGATGCTTTTGTCATGGTCTAGGCCTAGATCCCCGCCAGGCCATGGCACACTTGGACTTCTACTTGACCGCCGGACG 22 17641587 0.979272593 8 19 122 0.88 1.342422681 0.16 0.136363636 0.24 22 3 0 22 X:17641563-17641693 6 RhoGAPp190 FBtr0333660|FBtr0333662|FBtr0074483|FBtr0074482|FBtr0074481|FBtr0333659|FBtr0333661 17639145|17639145|17639145|17639145|17640504|17639145|17639145 17641617|17641617|17641617|17641617|17641617|17641617|17641617 CTACTT 6mer2-7 dme-miR-968-5p X - 17641554 17641602 3'utr RhoGAPp190 FlyBase G51524.1 AGGCCATGGCACACTTGGACTTCTACTTGACCGCCGGACGCGAAGCCAA 8 17641587 0.963624051 2 8 41 1 1.079181246 0.166666667 0.5 0.666666667 8 0 0 12 X:17641554-17641602 6 11 5619 FBgn0026375 866.7733333 14.19333333 21.75666667 0.012690746 0.775011743 0.505592156 7 7 7 0.01 dme-miR-318-3p 7mer-A1 CCAGTGA X 17668624 17668630 + X_17668624_17668630_+ 0.823349562 0.823349562 0.823349562 0 beta-Spec FBtr0334405 17667960 17669371 X + 17668568 17668660 3'utr beta-Spec FlyBase G62494.1 ATTGACCTTCCGCGGTGAGCCCAGCTACGATCTGCAAAACGCTGCCATCGAAATTGCCAGTGATTACACCAAGAAGAAGCACGTTCTGCGAGT 24 17668632 0.896149945 6 23 95 0.965517241 1.447158031 0.24137931 0.166666667 0.310344828 24 1 0 28 X:17668568-17668660 7 beta-Spec FBtr0334405 17667960 17669371 CCAGTGA 7mer-A1 dme-miR-318-3p X + 17668613 17668648 3'utr beta-Spec FlyBase G47158.1 CATCGAAATTGCCAGTGATTACACCAAGAAGAAGCA 9 17668632 0.954673847 2 8 36 0.928571429 1.113943352 0.285714286 0.444444444 0.642857143 9 1 0 13 X:17668613-17668648 7 13 5620 FBgn0250788 4584.71 71.70666667 109.7433333 0.002835512 0.181294161 0.118458221 -8 -8 -8 0.01 dme-miR-986-5p 6mer3-8 ATTCGA X 17668837 17668842 + X_17668837_17668842_+ 1 1 1 0 beta-Spec FBtr0334405 17667960 17669371 X + 17668801 17668858 3'utr beta-Spec FlyBase G62495.1 TGTCCCAGTGGGTGACCTCCCTGAAAGCCCAGAGCGATTCGACAGCGGTGGCCGCCAG 13 17668838 0.850856066 4 12 29 0.866666667 1.113943352 0.6 0.153846154 0.266666667 13 2 0 13 X:17668801-17668858 6 beta-Spec FBtr0334405 17667960 17669371 ATTCGA 6mer3-8 dme-miR-986-5p X + 17668806 17668863 3'utr beta-Spec FlyBase G47159.1 CAGTGGGTGACCTCCCTGAAAGCCCAGAGCGATTCGACAGCGGTGGCCGCCAGCAGAT 11 17668838 0.889042501 5 9 28 0.944444444 1.230448921 0.111111111 0.454545455 0.666666667 11 1 0 17 X:17668806-17668863 6 9.5 5621 FBgn0250788 4584.71 71.70666667 109.7433333 0.002072105 0.132484195 0.086565623 -1 -1 -1 0.01 dme-miR-980-3p 7mer-A1 GCAGCTA X 17668969 17668975 + X_17668969_17668975_+ 0.823349562 0.823349562 0.823349562 0 beta-Spec FBtr0334404|FBtr0074454|FBtr0334405 17668936|17668936|17667960 17669371|17669371|17669371 X + 17668943 17669050 3'utr beta-Spec FlyBase G62496.1 CAGCCGTAACGCAACCATAAGCAAGAGCAGCTAATTAAAACAAATAACAAATAACATGAAATGATATAATACAAATGCAAAACGACAACAAATTATACAGCAAAAATT 36 17668977 0.943899992 8 29 116 0.842105263 1.505149978 0 0.055555556 0.105263158 36 6 0 32 X:17668943-17669050 7 beta-Spec FBtr0334405|FBtr0074454|FBtr0334404 17667960|17668936|17668936 17669371|17669371|17669371 GCAGCTA 7mer-A1 dme-miR-980-3p X + 17668943 17668980 3'utr beta-Spec FlyBase G47160.1 CAGCCGTAACGCAACCATAAGCAAGAGCAGCTAATTAA 8 17668960 0.949219321 3 6 24 0.727272727 0.903089987 0 0.375 0.545454545 8 3 0 8 X:17668943-17668980 7 16 5622 FBgn0250788 4584.71 71.70666667 109.7433333 0.003489861 0.223131276 0.145794733 -8 9 0.5 0.01 dme-miR-12-5p 6mer3-8 AATACT X 17669194 17669199 + X_17669194_17669199_+ 0.975218798 1 0.987609399 0.017522955 beta-Spec FBtr0334404|FBtr0074454|FBtr0334405 17668936|17668936|17667960 17669371|17669371|17669371 X + 17669121 17669216 3'utr beta-Spec FlyBase G62497.1 AACCGACAAAAACTTGCAAGAGAAGAACGAGCAAAACATAAACAATTATTATGCTTATCAAATTTGCACGATAAATACTGCTATTATGATTAAACG 25 17669184 0.958890312 10 22 127 0.925925926 1.397940009 0.296296296 0.08 0.148148148 25 2 0 25 X:17669121-17669216 6 beta-Spec FBtr0334405|FBtr0074454|FBtr0334404 17667960|17668936|17668936 17669371|17669371|17669371 AATACT 6mer3-8 dme-miR-12-5p X + 17669156 17669238 3'utr beta-Spec FlyBase G47161.1 ACATAAACAATTATTATGCTTATCAAATTTGCACGATAAATACTGCTATTATGATTAAACGTATGTATCTTATTTATTTAAAC 11 17669203 0.984276593 9 11 84 1 1.230448921 0.117647059 0.363636364 0.588235294 11 0 0 17 X:17669156-17669238 6 8.5 5623 FBgn0250788 4584.71 71.70666667 109.7433333 0.001853989 0.11853849 0.077453452 10 -9 0.5 0.01 dme-miR-184-5p 7mer-m8 TGATAAG X 17699959 17699965 - X_17699959_17699965_- 0.658999343 0.658999343 0.658999343 0 CG8188 FBtr0074476|FBtr0340633|FBtr0346186 17699770|17699770|17698915 17701015|17701015|17701015 X - 17699929 17699981 3'utr CG8188 FlyBase G68516.1 GAAAGCAATGGCACGGTGATAAGTGCATGGGATATCCGTATCCTCGTCCTTTC 16 17699973 0.999741444 2 15 65 0.85 1.230448921 0.2 0.1875 0.35 16 3 0 17 X:17699929-17699981 7 CG8188 FBtr0340633|FBtr0346186|FBtr0074476 17699770|17698915|17699770 17701015|17701015|17701015 TGATAAG 7mer-m8 dme-miR-184-5p X - 17699911 17699983 3'utr CG8188 FlyBase G51538.1 TGGAAAGCAATGGCACGGTGATAAGTGCATGGGATATCCGTATCCTCGTCCTTTCGCTTGCTATGTCGCCGGT 18 17699973 0.963329446 3 16 72 0.896551724 0.937852093 0.310344828 0.5 0.689655172 18 1 2 26 X:17699911-17699983 7 15.5 5624 FBgn0030863 1351.526667 71.57333333 110.0366667 0.011468512 0.216561103 0.140862137 8 8 8 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 17700643 17700649 - X_17700643_17700649_- 0.823349562 0.823349562 0.823349562 0 CG8188 FBtr0074476|FBtr0100463|FBtr0340633|FBtr0346186 17699770|17700093|17699770|17698915 17701015|17701015|17701015|17701015 X - 17700634 17700726 3'utr CG8188 FlyBase G68522.2 CTGGAGGCCAATATCGGAACGGAACGGAAGTTAAAGCTGCAACAATTTCGGTAAAACGAGAGAGATAAAGAACCACTCCAAAGAACAGTGCAT 57 17700661 0.980729705 7 52 85 0.949152542 1.271066772 0.118644068 0.035087719 0.06779661 57 1 2 56 X:17700634-17700726 7 CG8188 FBtr0340633|FBtr0346186|FBtr0074476|FBtr0100463 17699770|17698915|17699770|17700093 17701015|17701015|17701015|17701015 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X - 17700621 17700683 3'utr CG8188 FlyBase G51541.2 AATTTCGGTAAAACGAGAGAGATAAAGAACCACTCCAAAGAACAGTGCATCCAGTTACCATAT 33 17700661 0.874322118 7 30 73 0.888888889 1.602059991 0.066666667 0.303030303 0.488888889 33 5 0 40 X:17700621-17700683 7 34.5 5625 FBgn0030863 1351.526667 71.57333333 110.0366667 0.025526688 0.4820231 0.313531853 12 12 12 0.01 dme-bantam-3p 6mer3-8 TGATCT X 17700803 17700808 - X_17700803_17700808_- 1 1 1 0 CG8188 FBtr0074476|FBtr0100463|FBtr0340633|FBtr0346186 17699770|17700093|17699770|17698915 17701015|17701015|17701015|17701015 X - 17700778 17700839 3'utr CG8188 FlyBase G68523.1 AAAGGAGGAGGCGCGCTATGAAATTTTACACTGATCTGATAAAAAACAAAACAGACAAAAAA 46 17700814 0.985770151 6 43 358 0.914893617 1.633468456 0.489361702 0.02173913 0.042553191 46 4 0 43 X:17700778-17700839 6 CG8188 FBtr0340633|FBtr0346186|FBtr0074476|FBtr0100463 17699770|17698915|17699770|17700093 17701015|17701015|17701015|17701015 TGATCT 6mer3-8 dme-bantam-3p X - 17700792 17700840 3'utr CG8188 FlyBase G51542.1 CAAAGGAGGAGGCGCGCTATGAAATTTTACACTGATCTGATAAAAAACA 25 17700815 0.985151197 4 24 196 0.970588235 1.51851394 0.323529412 0.32 0.5 25 1 0 33 X:17700792-17700840 6 32.5 5626 FBgn0030863 1351.526667 71.57333333 110.0366667 0.02404688 0.454079732 0.295356093 6 7 6.5 0.01 dme-miR-276a-3p 6mer3-8 AGTTCC X 17700996 17701001 - X_17700996_17701001_- 1 1 1 0 CG8188 FBtr0074476|FBtr0100463|FBtr0340633|FBtr0346186 17699770|17700093|17699770|17698915 17701015|17701015|17701015|17701015 X - 17700969 17701038 stop_codon CG8188 FlyBase G68524.1 AACGCATGCTGAAGAGATTATGAGAGGCATAAGGCGGAGTTCCATGGACTAGCTAATCAACCAGGAGCAG 63 17700994 0.904127642 8 59 292 0.945205479 1.361727836 0.178082192 0.142857143 0.260273973 63 2 2 69 X:17700969-17701038 6 CG8188 FBtr0340633|FBtr0346186|FBtr0074476|FBtr0100463 17699770|17698915|17699770|17700093 17701015|17701015|17701015|17701015 AGTTCC 6mer3-8 dme-miR-276a-3p X - 17700962 17701044 stop_codon CG8188 FlyBase G51543.1 AGAAGAAACGCATGCTGAAGAGATTATGAGAGGCATAAGGCGGAGTTCCATGGACTAGCTAATCAACCAGGAGCAGTAAGTAG 33 17700994 0.94700875 7 32 132 1 1.662757832 0.282608696 0.333333333 0.52173913 33 0 0 46 X:17700962-17701044 6 44 5627 FBgn0030863 1351.526667 71.57333333 110.0366667 0.032555776 0.614754098 0.399866711 -7 -7 -7 0.01 dme-miR-2b-2-5p 6mer3-8 TTGAAG X 17706631 17706636 + X_17706631_17706636_+ 1 1 1 0 par-6 FBtr0074455 17705418 17707096 X + 17706606 17706652 3'utr par-6 FlyBase G62513.1 ACGTACCCCTGTACACACAATTGAATTGAAGTCTGTGTATTCGCTTT 21 17706631 0.776636868 4 21 180 1 1.380211242 0 0.095238095 0.208333333 21 0 0 24 X:17706606-17706652 6 par-6 FBtr0074455 17705418 17707096 TTGAAG 6mer3-8 dme-miR-2b-2-5p X + 17706615 17706652 3'utr par-6 FlyBase G47175.1 TGTACACACAATTGAATTGAAGTCTGTGTATTCGCTTT 12 17706631 0.870498979 5 11 106 0.941176471 1.204119983 0 0.166666667 0.411764706 12 1 0 16 X:17706615-17706652 6 16.5 5628 FBgn0026192 952.7333333 39.83333333 61.04 0.017318592 0.414225941 0.270314548 0 0 0 0.01 dme-miR-33-5p 7mer-m1 AATGCAC X 17707476 17707482 - X_17707476_17707482_- 0.829692068 0.829692068 0.829692068 0 CG8173 FBtr0074475 17707399 17707634 X - 17707459 17707516 3'utr CG8173 FlyBase G68531.1 AACAAACCAATTACGGTTAAAGCCCCAAAACGCGAATGCACACTTAAGCAAATTGTAC 9 17707479 0.912550339 4 8 26 1 1 0.1 0.111111111 0.2 9 0 0 10 X:17707459-17707516 7 CG8173 FBtr0074475 17707399 17707634 AATGCAC 7mer-m1 dme-miR-33-5p X - 17707458 17707498 3'utr CG8173 FlyBase G51550.1 AAAGCCCCAAAACGCGAATGCACACTTAAGCAAATTGTACA 7 17707480 0.908424206 2 7 17 1 1.146128036 0.071428571 0.571428571 0.785714286 7 0 0 14 X:17707458-17707498 7 6.5 5629 FBgn0030864 922.93 68.84666667 105.6433333 0.007042788 0.094412705 0.061527782 -3 -2 -2.5 0.01 dme-miR-965-3p 7mer-m8 TACGCTT X 1780939 1780945 + X_1780939_1780945_+ 0.62020316 0.62016634 0.62018475 2.61E-05 Adar FBtr0309962|FBtr0339273|FBtr0305497|FBtr0339274|FBtr0309965|FBtr0309963 1780838|1780838|1780838|1780838|1779379|1780838 1781160|1781160|1781200|1781160|1781182|1781182 X + 1780899 1780997 5'utr Adar FlyBase G58046.1 TAATGCATAATCTAGTTGTTAAATGTTGATATCGAAAATGTACGCTTTACCAGCAAGAATTGCCTACATAGAAGCTAAAGTTCCGATTTGTGCTCATTA 88 1780967 0.905614653 14 83 523 0.948979592 1.667452953 0.255102041 0.102272727 0.193877551 88 4 1 93 X:1780899-1780997 7 Adar FBtr0339273|FBtr0305497|FBtr0309965|FBtr0339274|FBtr0309963|FBtr0309962 1780838|1780838|1779379|1780838|1780838|1780838 1781160|1781200|1781182|1781160|1781182|1781160 TACGCTT 7mer-m8 dme-miR-965-3p X + 1780894 1780994 5'utr Adar FlyBase G43911.1 AAGAGTAATGCATAATCTAGTTGTTAAATGTTGATATCGAAAATGTACGCTTTACCAGCAAGAATTGCCTACATAGAAGCTAAAGTTCCGATTTGTGCTCA 58 1780967 0.977247345 17 52 347 0.926829268 1.278753601 0.207317073 0.310344828 0.512195122 58 3 3 76 X:1780894-1780994 7 22.5 5630 FBgn0026086 1030.723333 39.3 60.36 0.02182933 0.572519084 0.372763419 -28 -28 -28 0.01 dme-miR-252-5p 8mer-m1 GTACTTAG X 17821339 17821346 - X_17821339_17821346_- 0.636789085 0.636789085 0.636789085 0 Socs16D FBtr0310310|FBtr0074473 17820762|17820773 17822326|17822326 X - 17821279 17821382 3'utr Socs16D FlyBase G68544.1 AAAGCGAGCGAATTATGATATAACCATTAACGCATTGTACTTAGTTTAATCCATGTCATGTACACAAATGATCGATTGCCAGATGGAAAGAATGGCGAACACAC 43 17821347 0.982730105 8 42 317 0.982142857 1.740362689 0.053571429 0.279069767 0.446428571 43 1 0 55 X:17821279-17821382 8 Socs16D FBtr0074473|FBtr0310310 17820773|17820762 17822326|17822326 GTACTTAG 8mer-m1 dme-miR-252-5p X - 17821282 17821408 3'utr Socs16D FlyBase G51559.1 GCAACGCCCGTGCCCAAAGGTCCTTGAAAGCGAGCGAATTATGATATAACCATTAACGCATTGTACTTAGTTTAATCCATGTCATGTACACAAATGATCGATTGCCAGATGGAAAGAATGGCGAACA 33 17821347 0.975830784 10 33 208 1 1.73239376 0.092592593 0.454545455 0.666666667 33 0 0 54 X:17821282-17821408 8 17.5 5631 FBgn0030869 790.3733333 19.79 30.42 0.022141435 0.884284992 0.575279421 1 1 1 0.01 dme-miR-1008-3p 8mer-A1 AGCTGTGA X 17821556 17821563 - X_17821556_17821563_- 0.643457748 0.643195625 0.643326687 0.000185333 Socs16D FBtr0310310|FBtr0074473 17820762|17820773 17822326|17822326 X - 17821513 17821582 3'utr Socs16D FlyBase G68545.1 ACTTTTATGCTTGCCTTTTAGCTGTGATTTAAATAAGTCGTCGAATGTTAATTGGAAGACGATGTGCAGT 61 17821565 0.992139498 12 56 632 0.931506849 1.531478917 0.178082192 0.163934426 0.301369863 61 4 1 68 X:17821513-17821582 8 Socs16D FBtr0074473|FBtr0310310 17820773|17820762 17822326|17822326 AGCTGTGA 8mer-A1 dme-miR-1008-3p X - 17821535 17821576 3'utr Socs16D FlyBase G51560.1 ATGCTTGCCTTTTAGCTGTGATTTAAATAAGTCGTCGAATGT 52 17821554 0.62935682 11 48 531 0.933333333 1.62324929 0.244444444 0.538461538 0.733333333 52 5 1 84 X:17821535-17821576 8 54 5632 FBgn0030869 790.3733333 19.79 30.42 0.068322143 2.728650834 1.775147929 2 -9 -3.5 0.01 "dme-miR-995-3p,dme-miR-998-3p" 7mer-A1 GGTGCTA X 17821924 17821930 - X_17821924_17821930_- 0.823349562 0.823349562 0.823349562 0 Socs16D FBtr0310310|FBtr0074473 17820762|17820773 17822326|17822326 X - 17821913 17821940 3'utr Socs16D FlyBase G68548.1 TTTTGTACTCGGTGCTATACTATAAATA 9 17821934 0.71350446 5 8 80 0.888888889 0.903089987 0 0 0 9 1 0 8 X:17821913-17821940 7 Socs16D FBtr0074473|FBtr0310310 17820773|17820762 17822326|17822326 GGTGCTA 7mer-A1 "dme-miR-995-3p,dme-miR-998-3p" X - 17821911 17821940 3'utr Socs16D FlyBase G51561.1 TTTTGTACTCGGTGCTATACTATAAATATT 9 17821936 0.627289222 6 8 83 0.857142857 1.079181246 0.071428571 0.444444444 0.642857143 9 2 0 12 X:17821911-17821940 7 9 5633 FBgn0030869 790.3733333 19.79 30.42 0.011387024 0.454775139 0.295857988 4 6 5 0.01 dme-miR-92b-3p 7mer-m1 TGCAATT X 17848285 17848291 - X_17848285_17848291_- 0.694787587 0.697086794 0.695937191 0.00162578 CG15814 FBtr0074468|FBtr0074470|FBtr0074469|FBtr0074471 17848108|17848108|17848108|17848108 17848640|17848640|17848640|17848640 X - 17848259 17848317 3'utr CG15814 FlyBase G68559.1 ATTGGAGTCTTTAATCGAAACGTAAATGCAATTTTGGATATATGTATCTATATCTATAT 25 17848295 0.982125177 5 24 208 0.965517241 1.447158031 0.103448276 0.12 0.24137931 25 1 0 28 X:17848259-17848317 7 CG15814 FBtr0074471|FBtr0074469|FBtr0074470|FBtr0074468 17848108|17848108|17848108|17848108 17848640|17848640|17848640|17848640 TGCAATT 7mer-m1 dme-miR-92b-3p X - 17848271 17848318 3'utr CG15814 FlyBase G51572.1 CATTGGAGTCTTTAATCGAAACGTAAATGCAATTTTGGATATATGTAT 13 17848295 0.929928999 5 12 100 0.9375 1.176091259 0.0625 0.230769231 0.375 13 1 0 15 X:17848271-17848318 7 18 5634 FBgn0030873 590.5033333 43.31 66.22 0.03048247 0.415608405 0.271821202 4 4 4 0.01 dme-bantam-3p 6mer2-7 GATCTC X 17851829 17851834 + X_17851829_17851834_+ 1 1 1 0 CG6506 FBtr0074465 17851740 17851889 X + 17851809 17851856 3'utr CG6506 FlyBase G62553.1 ACTTTTTATAGAACGACTAAGATCTCTAGGCTCAAGTTAAGTTAAGCT 86 17851835 0.761354949 5 85 401 0.990566038 2.021189299 0.132075472 0.197674419 0.349056604 86 1 0 105 X:17851809-17851856 6 CG6506 FBtr0074465 17851740 17851889 GATCTC 6mer2-7 dme-bantam-3p X + 17851787 17851844 3'utr CG6506 FlyBase G47198.1 CTCTAGCAATCAAATGTTTCACACTTTTTATAGAACGACTAAGATCTCTAGGCTCAAG 43 17851835 0.956567528 3 42 199 0.983870968 1.785329835 0.096774194 0.348837209 0.548387097 43 1 0 61 X:17851787-17851844 6 63 5635 FBgn0030874 43.33333333 3.953333333 5.973333333 1.453846154 15.93591906 10.546875 -6 -6 -6 0.01 dme-miR-305-5p 7mer-m1 GTACAAT X 17858578 17858584 - X_17858578_17858584_- 0.765586663 0.765586663 0.765586663 0 Arp8 FBtr0074544 17858377 17858769 X - 17858540 17858602 3'utr Arp8 FlyBase G68565.1 ACAAATTTATACAAGATTGTACAATTATTTTATTTTTAAAGACACCTAACAAATATGCAGAAT 7 17858579 0.99459099 6 6 63 0.777777778 0.84509804 0.111111111 0.285714286 0.444444444 7 2 0 7 X:17858540-17858602 7 Arp8 FBtr0074544 17858377 17858769 GTACAAT 7mer-m1 dme-miR-305-5p X - 17858573 17858643 3'utr Arp8 FlyBase G51575.1 AGCATTACCCTGGAGGAAGGAAACACTCCGGATGGGGTCATACAAATTTATACAAGATTGTACAATTATTT 11 17858584 0.87856763 7 11 55 1 1.146128036 0 0.181818182 0.357142857 11 0 0 14 X:17858573-17858643 7 4.5 5636 FBgn0030877 203.0033333 10.82333333 16.55 0.022167124 0.415768402 0.271903323 -5 0 -2.5 0.01 dme-miR-79-3p 7mer-A1 AGCTTTA X 17906060 17906066 - X_17906060_17906066_- 0.823349562 0.823349562 0.823349562 0 CG7772 FBtr0074540 17906029 17906174 X - 17906051 17906133 3'utr CG7772 FlyBase G68594.1 AGTCTACTCCCATTCTACTCCACGGTGATAGTTCTTAGATACTAAGAGTTTACATGAACTGTAGCAAAGCTTTAGCCCCAAAT 12 17906074 0.87536539 8 10 77 0.916666667 1.041392685 0.333333333 0 0 12 1 0 11 X:17906051-17906133 7 CG7772 FBtr0074540 17906029 17906174 AGCTTTA 7mer-A1 dme-miR-79-3p X - 17906053 17906118 3'utr CG7772 FlyBase G51592.1 TACTCCACGGTGATAGTTCTTAGATACTAAGAGTTTACATGAACTGTAGCAAAGCTTTAGCCCCAA 11 17906075 0.920476507 7 9 63 0.8 1.204119983 0.15 0.363636364 0.65 11 4 0 16 X:17906053-17906118 7 3.5 5637 FBgn0030883 188.33 28.34666667 43.33666667 0.0185844 0.123471308 0.080763018 8 9 8.5 0.01 dme-bantam-3p 7mer-A1 GATCTCA X 17924507 17924513 - X_17924507_17924513_- 0.823349562 0.823349562 0.823349562 0 Sh FBtr0089658 17924305 17930123 X - 17924496 17924534 3'utr Sh FlyBase G68596.1 AAATTGAAACCAACCAAATTGGATCTCAAATCAAAGCAG 54 17924515 0.777553198 3 50 223 0.9375 1.477121255 0.046875 0.148148148 0.28125 54 3 1 60 X:17924496-17924534 7 Sh FBtr0089658 17924305 17930123 GATCTCA 7mer-A1 dme-bantam-3p X - 17924495 17924530 3'utr Sh FlyBase G51593.1 TGAAACCAACCAAATTGGATCTCAAATCAAAGCAGC 34 17924515 0.934119463 2 31 135 0.921568627 1.371067862 0.039215686 0.411764706 0.607843137 34 3 1 47 X:17924495-17924530 7 44 5638 FBgn0003380 28.61666667 0.493333333 0.783333333 1.537565521 89.18918919 56.17021277 2 2 2 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC X 18078953 18078959 - X_18078953_18078959_- 0.661615645 0.661615645 0.661615645 0 CG7536 FBtr0343317|FBtr0343318|FBtr0074530 18078489|18078861|18078861 18079653|18079653|18079653 X - 18078916 18079015 3'utr CG7536 FlyBase G68597.1 AACTAGAGCTGATCCCGAACGGAATTGTACATAGTATACGTATGCTAGTGCCTGTGTGTGTTCTTTTCGCTCTGCGTGTGTGTGTGTGTGTGTGAGTGTG 28 18078952 0.991302797 8 26 277 0.96969697 1.505149978 0.212121212 0.142857143 0.272727273 28 1 0 32 X:18078916-18079015 7 CG7536 FBtr0074530|FBtr0343317|FBtr0343318 18078861|18078489|18078861 18079653|18079653|18079653 TGTGTTC 7mer-m8 dme-miR-317-3p X - 18078916 18079031 5'utr-coding CG7536 FlyBase G51596.1 AAGTTTAAAGAACTTAAACTAGAGCTGATCCCGAACGGAATTGTACATAGTATACGTATGCTAGTGCCTGTGTGTGTTCTTTTCGCTCTGCGTGTGTGTGTGTGTGTGTGAGTGTG 20 18078952 0.984385208 14 20 176 1 1.431363764 0.185185185 0.25 0.444444444 20 0 0 27 X:18078916-18079031 7 16 5639 FBgn0030890 573.73 20 30.81333333 0.027887682 0.8 0.519255733 -7 -7 -7 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 18079078 18079083 - X_18079078_18079083_- 0.999952952 0.999997283 0.999975118 3.13E-05 CG7536 FBtr0343317|FBtr0343317|FBtr0343317|FBtr0343318|FBtr0343318|FBtr0343318|FBtr0074531|FBtr0074531|FBtr0074531|FBtr0074530|FBtr0074530|FBtr0074530 18078489|18078489|18078489|18078861|18078861|18078861|18079015|18079015|18079015|18078861|18078861|18078861 18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653 X - 18079056 18079115 5'utr CG7536 FlyBase G68598.1 CTGTCCACCTGTTGATTGATATACGACATAGACTGTGACCAAATCGAAACTTAAACTAAA 147 18079086 0.781455878 12 122 714 0.971428571 1.929418926 0.297142857 0.143835616 0.285714286 146 4 1 170 X:18079056-18079115 6 CG7536 FBtr0074531|FBtr0074531|FBtr0074531|FBtr0074530|FBtr0074530|FBtr0074530|FBtr0343317|FBtr0343317|FBtr0343317|FBtr0343318|FBtr0343318|FBtr0343318 18079015|18079015|18079015|18078861|18078861|18078861|18078489|18078489|18078489|18078861|18078861|18078861 18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X - 18079060 18079140 5'utr CG7536 FlyBase G51597.1 TAGATCTGCCTTATCTGTTATCTGTCTGTCCACCTGTTGATTGATATACGACATAGACTGTGACCAAATCGAAACTTAAAC 101 18079081 0.750316737 14 97 571 0.99378882 1.903089987 0.298136646 0.356435644 0.596273292 101 0 1 160 X:18079060-18079140 6 101 5640 FBgn0030890 573.73 20 30.81333333 0.176040995 5.05 3.277801817 3 -2 0.5 0.01 dme-miR-252-5p 8mer-m1 GTACTTAG X 18079247 18079254 - X_18079247_18079254_- 0.636789085 0.636788719 0.636788902 2.83E-07 CG7536 FBtr0343317|FBtr0343318|FBtr0074531|FBtr0074530 18078489|18078861|18079015|18078861 18079653|18079653|18079653|18079653 X - 18079236 18079299 5'utr CG7536 FlyBase G68600.1 AATCCATACCTTCCACAGAAATTGGAGTAGAGAACGGCAGTATTAGTACTTAGAAAAGGCGAAC 10 18079252 0.967788521 5 10 52 1 1.041392685 0.181818182 0.1 0.181818182 10 0 0 11 X:18079236-18079299 8 CG7536 FBtr0074531|FBtr0074530|FBtr0343317|FBtr0343318 18079015|18078861|18078489|18078861 18079653|18079653|18079653|18079653 GTACTTAG 8mer-m1 dme-miR-252-5p X - 18079245 18079300 5'utr CG7536 FlyBase G51598.1 TAATCCATACCTTCCACAGAAATTGGAGTAGAGAACGGCAGTATTAGTACTTAGAA 6 18079257 0.952381365 3 6 25 1 1 0 0.5 0.7 6 0 0 10 X:18079245-18079300 8 5.5 5641 FBgn0030890 573.73 20 30.81333333 0.009586391 0.275 0.178494158 -2 3 0.5 0.01 dme-miR-999-3p 6mer2-7 GTTAAC X 18079416 18079421 - X_18079416_18079421_- 1 1 1 0 CG7536 FBtr0343317|FBtr0343318|FBtr0074531|FBtr0074530 18078489|18078861|18079015|18078861 18079653|18079653|18079653|18079653 X - 18079409 18079447 5'utr CG7536 FlyBase G68602.1 AACTAATTTAGCATTCCACGTATGCGGTTAACTAACGAA 8 18079425 0.961995296 3 8 46 1 0.903089987 0 0 0 8 0 0 8 X:18079409-18079447 6 CG7536 FBtr0074531|FBtr0074530|FBtr0343317|FBtr0343318 18079015|18078861|18078489|18078861 18079653|18079653|18079653|18079653 GTTAAC 6mer2-7 dme-miR-999-3p X - 18079413 18079443 5'utr CG7536 FlyBase G51600.1 AATTTAGCATTCCACGTATGCGGTTAACTAA 5 18079425 0.792519449 2 5 37 1 0.903089987 0 0.6 0.75 5 0 0 8 X:18079413-18079443 6 6.5 5642 FBgn0030890 573.73 20 30.81333333 0.011329371 0.325 0.210947642 4 4 4 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA X 18079495 18079502 - X_18079495_18079502_- 0.500120318 0.500120318 0.500120318 0 CG7536 FBtr0343317|FBtr0343318|FBtr0074531|FBtr0074530 18078489|18078861|18079015|18078861 18079653|18079653|18079653|18079653 X - 18079452 18079532 5'utr CG7536 FlyBase G68603.1 GTTTAGCTAATTTGTATATTTAGTGACTAAGTACTTAAAATTGAGGAGAGACAATGTCCAGCAATAATTAGTGCATAAGAT 38 18079477 0.659099148 12 34 199 0.905660377 1.380211242 0.20754717 0.315789474 0.509433962 38 4 1 48 X:18079452-18079532 8 CG7536 FBtr0074531|FBtr0074530|FBtr0343317|FBtr0343318 18079015|18078861|18078489|18078861 18079653|18079653|18079653|18079653 GTACTTAA 8mer-A1 dme-miR-252-5p X - 18079458 18079518 5'utr CG7536 FlyBase G51601.1 TATATTTAGTGACTAAGTACTTAAAATTGAGGAGAGACAATGTCCAGCAATAATTAGTGCA 26 18079491 0.685501035 8 25 126 0.911764706 1.491361694 0.117647059 0.230769231 0.411764706 26 3 0 31 X:18079458-18079518 8 17.5 5643 FBgn0030890 573.73 20 30.81333333 0.030502153 0.875 0.567935958 -25 -11 -18 0.01 dme-miR-1006-3p 6mer3-8 CGAATT X 18079630 18079635 - X_18079630_18079635_- 0.507200502 0.507200502 0.507200502 0 CG7536 FBtr0343317|FBtr0343318|FBtr0074531|FBtr0074530 18078489|18078861|18079015|18078861 18079653|18079653|18079653|18079653 X - 18079595 18079659 stop_codon CG7536 FlyBase G68604.1 TTGTAGGCAACGATGGCCGCCCACCGAATTGTGCTTCCTAATCAACGGTTTTGCGGAACGTCTTA 99 18079630 0.763937369 8 96 657 0.972972973 1.73239376 0.45045045 0.121212121 0.216216216 99 2 1 108 X:18079595-18079659 6 CG7536 FBtr0074531|FBtr0074530|FBtr0343317|FBtr0343318 18079015|18078861|18078489|18078861 18079653|18079653|18079653|18079653 CGAATT 6mer3-8 dme-miR-1006-3p X - 18079598 18079656 stop_codon CG7536 FlyBase G51602.1 TAGGCAACGATGGCCGCCCACCGAATTGTGCTTCCTAATCAACGGTTTTGCGGAACGTC 59 18079630 0.767527838 4 57 371 0.976470588 1.919078092 0.223529412 0.288135593 0.505882353 59 2 0 83 X:18079598-18079656 6 75.5 5644 FBgn0030890 573.73 20 30.81333333 0.131595001 3.775 2.450237992 -5 -5 -5 0.01 dme-miR-14-3p 6mer2-7 AGACTG X 18087720 18087725 + X_18087720_18087725_+ 1 1 1 0 dik FBtr0339540|FBtr0074510 18087677|18087581 18088418|18088418 X + 18087655 18087746 stop_codon dik FlyBase G62593.1 AGCCTCAAGCTGCAGTGCGTCTGAAGGAGCTGCTCCTCCTTACTCGCCACTCCTTTCATTTCGCCAGACTGTAAATTAGCCACGCTATTCGA 20 18087729 0.978189958 10 18 121 0.913043478 1.322219295 0.130434783 0.15 0.260869565 20 2 0 21 X:18087655-18087746 6 dik FBtr0339540|FBtr0074510 18087677|18087581 18088418|18088418 AGACTG 6mer2-7 dme-miR-14-3p X + 18087648 18087790 stop_codon dik FlyBase G47221.1 CGACGCTAGCCTCAAGCTGCAGTGCGTCTGAAGGAGCTGCTCCTCCTTACTCGCCACTCCTTTCATTTCGCCAGACTGTAAATTAGCCACGCTATTCGACACGTACACGTAGCCTCTAGTGTCCGCAATCCAAGTTGTGGACG 13 18087728 0.978801547 12 13 83 1 1.361727836 0.217391304 0.615384615 0.782608696 13 0 0 23 X:18087648-18087790 6 9 5645 FBgn0030891 215.6666667 9.88 15.20666667 0.041731066 0.910931174 0.591845682 -9 -8 -8.5 0.01 dme-miR-14-3p 6mer2-7 AGACTG X 18087933 18087938 + X_18087933_18087938_+ 1 1 1 0 dik FBtr0339540|FBtr0074510 18087677|18087581 18088418|18088418 X + 18087844 18087985 3'utr dik FlyBase G62595.1 GAGTTTTGGCATTCGTTTTCCCCAAATCGAACGCCACTTTTGAGTCGTTTTCGACTAGCTTCCAAACCCGTATTCTTATCTTCGTCACCAGACTGTACATTAACAAAGATACATTAGCTCATAGAATGTAGTGTTCAAGATT 47 18087939 0.979101437 19 45 303 0.961538462 1.397940009 0.096153846 0.106382979 0.192307692 47 1 1 50 X:18087844-18087985 6 dik FBtr0339540|FBtr0074510 18087677|18087581 18088418|18088418 AGACTG 6mer2-7 dme-miR-14-3p X + 18087894 18087978 3'utr dik FlyBase G47223.1 TCGACTAGCTTCCAAACCCGTATTCTTATCTTCGTCACCAGACTGTACATTAACAAAGATACATTAGCTCATAGAATGTAGTGTT 41 18087938 0.777740845 14 39 268 0.967741935 1.477121255 0.129032258 0.390243902 0.596774194 41 1 1 60 X:18087894-18087978 6 29.5 5646 FBgn0030891 215.6666667 9.88 15.20666667 0.136785162 2.98582996 1.939938623 -6 -5 -5.5 0.01 dme-miR-980-5p 8mer-m1 GAAAAACT X 18088253 18088260 + X_18088253_18088260_+ 0.607906106 0.607906106 0.607906106 0 dik FBtr0339540|FBtr0074510 18087677|18087581 18088418|18088418 X + 18088215 18088275 3'utr dik FlyBase G62596.1 AGTGGAGGGTGAGATTCGCATTATTCGCTAAATGAACTGAAAAACTTTCCGCTACTGGAAT 11 18088247 0.989182469 2 8 83 0.75 0.954242509 0.583333333 0.090909091 0.166666667 11 3 0 9 X:18088215-18088275 8 dik FBtr0339540|FBtr0074510 18087677|18087581 18088418|18088418 GAAAAACT 8mer-m1 dme-miR-980-5p X + 18088232 18088277 3'utr dik FlyBase G47224.1 GCATTATTCGCTAAATGAACTGAAAAACTTTCCGCTACTGGAATTT 9 18088245 0.852040673 3 9 67 1 1.146128036 0.642857143 0.333333333 0.571428571 9 0 0 14 X:18088232-18088277 8 9 5647 FBgn0030891 215.6666667 9.88 15.20666667 0.041731066 0.910931174 0.591845682 6 8 7 0.01 dme-miR-34-5p 7mer-A1 ACTGCCA X 18088759 18088765 - X_18088759_18088765_- 0.823325086 0.822147725 0.822736405 0.000832548 CG7206 FBtr0089576|FBtr0308352 18088723|18088723 18089007|18089869 X - 18088733 18088826 3'utr CG7206 FlyBase G68622.1 GGCCACTGACGACGTGTTCACCCAAGACTAAAAACTTGCACATATTAGAAGATCAGATTTGACTGCCATTTGCTACGTATAATAAAGTTTGTTT 73 18088768 0.98128655 14 69 502 0.93902439 1.886490725 0.195121951 0.109589041 0.207317073 73 5 0 77 X:18088733-18088826 7 CG7206 FBtr0089576|FBtr0308352 18088723|18088723 18089007|18089869 ACTGCCA 7mer-A1 dme-miR-34-5p X - 18088749 18088826 3'utr CG7206 FlyBase G51613.1 GGCCACTGACGACGTGTTCACCCAAGACTAAAAACTTGCACATATTAGAAGATCAGATTTGACTGCCATTTGCTACGT 55 18088768 0.978579715 12 52 368 0.946808511 1.171238756 0.287234043 0.454545455 0.680851064 55 0 5 89 X:18088749-18088826 7 53 5648 FBgn0030892 243 18.00333333 27.36 0.218106996 2.943899278 1.937134503 3 3 3 0.01 dme-miR-34-5p 6mer2-7 ACTGCC X 18089367 18089372 - X_18089367_18089372_- 0.948914233 1 0.974457117 0.036123116 CG7206 FBtr0308352 18088723 18089869 X - 18089322 18089391 5'utr CG7206 FlyBase G68625.1 AAGAGCAAGTACCAGTCGGACTGCCTGCAGCGTGTGATTGCCATGCGAGCAATACGCTTTTTGAACACCA 26 18089353 0.722003438 7 23 133 0.870967742 1.431363764 0.129032258 0.153846154 0.290322581 26 4 0 27 X:18089322-18089391 6 CG7206 FBtr0308352 18088723 18089869 ACTGCC 6mer2-7 dme-miR-34-5p X - 18089350 18089389 5'utr CG7206 FlyBase G51616.1 GAGCAAGTACCAGTCGGACTGCCTGCAGCGTGTGATTGCC 8 18089376 0.7134586 5 8 31 1 1.113943352 0.076923077 0.5 0.692307692 8 0 0 13 X:18089350-18089389 6 13.5 5649 FBgn0030892 243 18.00333333 27.36 0.055555556 0.749861137 0.493421053 -19 4 -7.5 0.01 dme-miR-282-5p 7mer-A1 GAGGCTA X 18089604 18089610 - X_18089604_18089610_- 0.818535327 0.818177329 0.818356328 0.000253144 CG7206 FBtr0308352 18088723 18089869 X - 18089499 18089634 5'utr CG7206 FlyBase G68627.1 GAGGCGCCACAGAAAGGTCAGGATGAGGCTAAGGAAGAGGACGACACTATATTGATGCTGCAGGCGGCCGATGCCGAGGAGCTGCCCCCAAGGCTTGAGGATTACATGTACTTTGTGCTGGACACCAACGTCCTCA 125 18089611 0.894010264 11 121 311 0.97826087 2.130333768 0.260869565 0.096 0.18115942 125 3 0 135 X:18089499-18089634 7 CG7206 FBtr0308352 18088723 18089869 GAGGCTA 7mer-A1 dme-miR-282-5p X - 18089564 18089635 5'utr CG7206 FlyBase G51619.1 GGAGGCGCCACAGAAAGGTCAGGATGAGGCTAAGGAAGAGGACGACACTATATTGATGCTGCAGGCGGCCGA 56 18089611 0.87827535 4 54 120 0.967391304 1.949390007 0.315217391 0.428571429 0.652173913 56 3 0 89 X:18089564-18089635 7 79.5 5650 FBgn0030892 243 18.00333333 27.36 0.327160494 4.415848917 2.905701754 1 1 1 0.01 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG X 18097086 18097092 + X_18097086_18097092_+ 0.70297214 0.70297214 0.70297214 0 RhoGAP16F FBtr0074513|FBtr0307200|FBtr0307201|FBtr0343310 18096876|18096876|18096876|18096876 18097413|18097413|18097413|18097413 X + 18097057 18097112 3'utr RhoGAP16F FlyBase G62618.1 ATCCTCAACCCGAAACCGAACACCCCACTGTACCTGCCACACCTCTATACCCATTC 172 18097085 0.975605003 3 171 493 0.995024876 2.301029996 0 0.139534884 0.263681592 172 1 0 200 X:18097057-18097112 7 RhoGAP16F FBtr0307201|FBtr0074513|FBtr0343310|FBtr0307200 18096876|18096876|18096876|18096876 18097413|18097413|18097413|18097413 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" X + 18097060 18097109 3'utr RhoGAP16F FlyBase G47244.1 CTCAACCCGAAACCGAACACCCCACTGTACCTGCCACACCTCTATACCCA 84 18097085 0.972804142 2 82 245 0.968992248 1.795880017 0.007751938 0.357142857 0.581395349 84 3 1 125 X:18097060-18097109 7 127.5 5651 FBgn0030893 601.22 27.60666667 42.25333333 0.212068793 4.61844965 3.017513411 1 1 1 0.01 dme-miR-190-5p 6mer3-8 ACATAT X 18097298 18097303 + X_18097298_18097303_+ 1 1 1 0 RhoGAP16F FBtr0074513|FBtr0307200|FBtr0307201|FBtr0343310 18096876|18096876|18096876|18096876 18097413|18097413|18097413|18097413 X + 18097140 18097358 3'utr RhoGAP16F FlyBase G62619.1 TCCCGATCACATCGTCTACAGATGCACCGCCGATCGCCGCCGCCTGAGCATGCGCAACCTAAAGAAGACTCTGTCGCAGCCGGACCTGCTCTTTCACAATCTATTCTGAGCTGGCCCAATGACATCCAATGGATCCTTCATCCCAGAGAGAGCACTGTACATATATGGAATGACTTTACGCCCCGCTAGCAATTGTGTCCTAAGATTACTTTTTATATT 209 18097316 0.97146282 26 201 1077 0.954372624 2.098643726 0.258555133 0.186602871 0.353612167 209 11 1 251 X:18097140-18097358 6 RhoGAP16F FBtr0307201|FBtr0343309|FBtr0074513|FBtr0343310|FBtr0307200 18096876|18097247|18096876|18096876|18096876 18097413|18097413|18097413|18097413|18097413 ACATAT 6mer3-8 dme-miR-190-5p X + 18097259 18097351 3'utr RhoGAP16F FlyBase G47246.1 TGACATCCAATGGATCCTTCATCCCAGAGAGAGCACTGTACATATATGGAATGACTTTACGCCCCGCTAGCAATTGTGTCCTAAGATTACTTT 149 18097316 0.733890773 16 137 739 0.917030568 2.021189299 0.253275109 0.369127517 0.589519651 149 18 1 210 X:18097259-18097351 6 26 5652 FBgn0030893 601.22 27.60666667 42.25333333 0.043245401 0.941801497 0.615336068 -18 -18 -18 0.01 dme-miR-14-3p 6mer2-7 AGACTG X 18097710 18097715 - X_18097710_18097715_- 1 1 1 0 CG7192 FBtr0074528|FBtr0074527|FBtr0310272 18097556|18097556|18097556 18098391|18098391|18098391 X - 18097631 18097750 3'utr CG7192 FlyBase G68632.1 CATATATCTATTACATATTAGCTCTAGTGACGATTAGACTGTATTGCAAAATCATAGATTCTTCCCAGCTGCCTCCGTCCCCGTCATCCGCATTCCCAGCTCCTTTTCGCCCCTCTTCCT 1121 18097717 0.987311583 18 1096 9676 0.979607251 2.635818721 0.069486405 0.149866191 0.28021148 1121 25 2 1297 X:18097631-18097750 6 CG7192 FBtr0074527|FBtr0310272|FBtr0074528 18097556|18097556|18097556 18098391|18098391|18098391 AGACTG 6mer2-7 dme-miR-14-3p X - 18097655 18097744 3'utr CG7192 FlyBase G51623.1 TCTATTACATATTAGCTCTAGTGACGATTAGACTGTATTGCAAAATCATAGATTCTTCCCAGCTGCCTCCGTCCCCGTCATCCGCATTCC 715 18097717 0.811940449 17 690 5858 0.970588235 1.909720566 0.061580882 0.384615385 0.595588235 715 20 12 1056 X:18097655-18097744 6 890 5653 FBgn0030894 672.5866667 40.63666667 62.49666667 1.323249544 21.90140267 14.24075951 2 2 2 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 18098008 18098013 - X_18098008_18098013_- 1 1 1 0 CG7192 FBtr0074528|FBtr0074528|FBtr0074528|FBtr0074527|FBtr0074527|FBtr0074527|FBtr0310272|FBtr0310272|FBtr0310272 18097556|18097556|18097556|18097556|18097556|18097556|18097556|18097556|18097556 18098391|18098391|18098391|18098391|18098391|18098391|18098391|18098391|18098391 X - 18097979 18098049 3'utr CG7192 FlyBase G68635.1 ATATACATACATGCATCGATTAACCCCAAATCAAATTGTGATCAAAGGAGCGAGCGCAATGTTTTGTCATT 380 18098014 0.742963396 7 367 1673 0.967517401 1.620136055 0.062645012 0.121052632 0.225058005 380 5 9 417 X:18097979-18098049 6 CG7192 FBtr0074527|FBtr0074527|FBtr0074527|FBtr0310272|FBtr0310272|FBtr0310272|FBtr0074528|FBtr0074528|FBtr0074528 18097556|18097556|18097556|18097556|18097556|18097556|18097556|18097556|18097556 18098391|18098391|18098391|18098391|18098391|18098391|18098391|18098391|18098391 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 18097977 18098042 3'utr CG7192 FlyBase G51625.1 TACATGCATCGATTAACCCCAAATCAAATTGTGATCAAAGGAGCGAGCGCAATGTTTTGTCATTAA 210 18098014 0.954500981 6 200 915 0.959876543 1.53851788 0.067901235 0.419047619 0.62345679 210 5 8 311 X:18097977-18098042 6 291.5 5654 FBgn0030894 672.5866667 40.63666667 62.49666667 0.433401396 7.173324584 4.66424876 1 1 1 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT X 18098258 18098264 - X_18098258_18098264_- 0.658999527 0.658999527 0.658999527 0 CG7192 FBtr0074528|FBtr0074527|FBtr0310272 18097556|18097556|18097556 18098391|18098391|18098391 X - 18098234 18098287 3'utr CG7192 FlyBase G68636.2 TAATCGCAAATAGATGCGCGTGTGGCAGCTGCCATGGTTAACCCAGTAGTTATT 171 18098265 0.841304419 9 167 783 0.99009901 2.301029996 0.287128713 0.152046784 0.282178218 171 2 0 200 X:18098234-18098287 7 CG7192 FBtr0074527|FBtr0310272|FBtr0074528 18097556|18097556|18097556 18098391|18098391|18098391 GGCAGCT 7mer-m8 dme-miR-980-3p X - 18098139 18098286 3'utr CG7192 FlyBase G51626.1 AATCGCAAATAGATGCGCGTGTGGCAGCTGCCATGGTTAACCCAGTAGTTATTCAGTTGGTATTAAGTTCTGAGGACCCCGGCCCCTTAGAGTAAAATGTGTGTAATATTCCTGTGCCTTCGATATGTATCTAATTTGGATGCTCGCC 134 18098265 0.841770574 21 131 638 0.984293194 2.274157849 0.308900524 0.305970149 0.513089005 134 3 0 188 X:18098139-18098286 7 139 5655 FBgn0030894 672.5866667 40.63666667 62.49666667 0.206664816 3.420556148 2.22411862 1 1 1 0.01 dme-miR-308-3p 8mer-m1 CTGTGATT X 18240797 18240804 - X_18240797_18240804_- 0.385560641 0.385560641 0.385560641 0 upd2 FBtr0300182 18240652 18241347 X - 18240784 18240818 3'utr upd2 FlyBase G68658.1 AATGCTTAAATCTACTGTGATTTATTTTAAGTACT 24 18240797 0.713651948 3 23 254 0.965517241 1.447158031 0.310344828 0.166666667 0.310344828 24 1 0 28 X:18240784-18240818 8 upd2 FBtr0300182 18240652 18241347 CTGTGATT 8mer-m1 dme-miR-308-3p X - 18240786 18240816 3'utr upd2 FlyBase G51649.1 TGCTTAAATCTACTGTGATTTATTTTAAGTA 9 18240797 0.655473911 3 9 99 1 1 0.3 0.111111111 0.2 9 0 0 10 X:18240786-18240816 8 16.5 5656 FBgn0030904 6 0.38 0.586666667 2.75 43.42105263 28.125 -7 -7 -7 0.01 dme-miR-8-3p 8mer-A1 CAGTATTA X 18241279 18241286 - X_18241279_18241286_- 0.671698124 0.671698124 0.671698124 0 upd2 FBtr0300182 18240652 18241347 X - 18241267 18241311 3'utr upd2 FlyBase G68661.1 CAGCCGGGTCAACATCACGCCCTTCCAGTATTATAGCGAGTACTT 13 18241288 0.774020328 4 11 83 0.866666667 0.812913357 0 0.153846154 0.266666667 13 1 1 13 X:18241267-18241311 8 upd2 FBtr0300182 18240652 18241347 CAGTATTA 8mer-A1 dme-miR-8-3p X - 18241273 18241301 3'utr upd2 FlyBase G51651.1 AACATCACGCCCTTCCAGTATTATAGCGA 6 18241288 0.838403907 2 5 32 0.888888889 0.903089987 0 0.333333333 0.555555556 6 1 0 8 X:18241273-18241301 8 9.5 5657 FBgn0030904 6 0.38 0.586666667 1.583333333 25 16.19318182 2 2 2 0.01 dme-miR-1008-3p 7mer-A1 GCTGTGA X 18284394 18284400 + X_18284394_18284400_+ 0.548394305 0.822353239 0.685373772 0.193718196 upd3 FBtr0113465 18283950 18284596 X + 18284359 18284417 3'utr upd3 FlyBase G62630.1 AAGTATACTAGATATACTTTGCCTTGTATTACGATGCTGTGATAGTAGATGATTAAAGT 34 18284393 0.766648922 8 27 289 0.8 1.028028724 0.55 0.176470588 0.3 34 6 2 32 X:18284359-18284417 7 upd3 FBtr0113465 18283950 18284596 GCTGTGA 7mer-A1 dme-miR-1008-3p X + 18284368 18284419 3'utr upd3 FlyBase G47255.1 AGATATACTTTGCCTTGTATTACGATGCTGTGATAGTAGATGATTAAAGTAA 30 18284393 0.839112212 7 29 274 0.978723404 1.662757832 0.340425532 0.366666667 0.595744681 30 1 0 46 X:18284368-18284419 7 30 5658 FBgn0053542 45.60666667 2.493333333 3.816666667 0.657798567 12.03208556 7.860262009 1 1 1 0.01 dme-miR-995-5p 6mer3-8 AATTCG X 18376595 18376600 + X_18376595_18376600_+ 1 1 1 0 CrebB FBtr0346093|FBtr0112878|FBtr0310341|FBtr0074557|FBtr0310340|FBtr0074555|FBtr0112879 18376050|18376050|18376050|18376050|18376050|18376050|18376050 18376817|18377864|18376817|18376817|18376817|18376817|18377864 X + 18376598 18376630 3'utr CrebB FlyBase G62640.1 TCGTAATCGATGCAGCAGAACGTGCGTGTCTAG 8 18376608 0.877650894 3 7 29 1 0.954242509 0.555555556 0.125 0.222222222 8 0 0 9 X:18376598-18376630 2 CrebB FBtr0112879|FBtr0074555|FBtr0310340|FBtr0074557|FBtr0310341|FBtr0112878|FBtr0346093 18376050|18376050|18376050|18376050|18376050|18376050|18376050 18377864|18376817|18376817|18376817|18376817|18377864|18376817 AATTCG 6mer3-8 dme-miR-995-5p X + 18376587 18376633 3'utr CrebB FlyBase G47262.1 TTTTACCTAATTCGTAATCGATGCAGCAGAACGTGCGTGTCTAGCGA 6 18376608 0.970825817 2 5 30 1 1 0.8 0.333333333 0.6 6 0 0 10 X:18376587-18376633 6 4.5 5659 FBgn0265784 1537.626667 58.89666667 90.57333333 0.002926588 0.076405003 0.049683498 -13 -13 -13 0.01 dme-miR-980-3p 6mer2-7 GCAGCT X 18381611 18381616 - X_18381611_18381616_- 1 1 1 0 betaCOP FBtr0074576 18381547 18381707 X - 18381570 18381654 3'utr betaCOP FlyBase G68668.1 GACGACGTACTCGGCCACCTGCCCGCATTCCGCCAGCTGCAGCTTCTTCAATTTACATTACACGTTACAATTATACATAAAGAAT 92 18381627 0.755769915 14 89 510 0.971153846 2.004321374 0.096153846 0.130434783 0.230769231 92 3 0 101 X:18381570-18381654 6 betaCOP FBtr0074576 18381547 18381707 GCAGCT 6mer2-7 dme-miR-980-3p X - 18381599 18381743 stop_codon betaCOP FlyBase G51660.1 AGCTCCTCGCAGAAGCAGTCGGTGCAGGCGGCCTAGTGGACGTGGAACTGGACGTGGACGACCAGCCACCAGCAGGAGCGACGTATCTAGACGACGTACTCGGCCACCTGCCCGCATTCCGCCAGCTGCAGCTTCTTCAATTTAC 41 18381627 0.961680185 12 36 175 0.852459016 1.716003344 0.131147541 0.365853659 0.573770492 41 9 0 52 X:18381599-18381743 6 46.5 5660 FBgn0008635 1626.186667 61.00333333 93.07333333 0.028594503 0.762253429 0.499606045 11 11 11 0.01 dme-miR-184-5p 6mer2-7 GATAAG X 18495234 18495239 - X_18495234_18495239_- 1 1 1 0 GalNAc-T2 FBtr0346082|FBtr0074625 18495065|18495182 18496408|18496408 X - 18495206 18495260 3'utr GalNAc-T2 FlyBase G68710.1 ATGTGTAACTTTAGAGTTATCGATAAGTCTGAATAATAGCATAGAAATAAAAACG 259 18495237 0.854606592 9 241 2091 0.912587413 2.416640507 0.311188811 0.084942085 0.171328671 259 25 0 261 X:18495206-18495260 6 GalNAc-T2 FBtr0074625|FBtr0346082 18495182|18495065 18496408|18496408 GATAAG 6mer2-7 dme-miR-184-5p X - 18495208 18495358 3'utr GalNAc-T2 FlyBase G51686.1 TGATTTTCGTAAAGCTCTCTGTACCAGGTAGTCGTAATCGTAATTGATCGTTGCAAGTGCTTCGGGAGTTTGATTTTTGAAAACAATATTTTACATTCATGTGTAACTTTAGAGTTATCGATAAGTCTGAATAATAGCATAGAAATAAAAA 153 18495237 0.989177313 15 127 1215 0.825471698 1.640978057 0.311320755 0.294117647 0.490566038 153 34 3 175 X:18495208-18495358 6 190 5661 FBgn0030930 489.5666667 17.31333333 26.39333333 0.388098318 10.974201 7.198787573 -2 -2 -2 0.01 dme-miR-283-5p 8mer-m1 TGATATTT X 18495772 18495779 - X_18495772_18495779_- 0.555593841 0.555593841 0.555593841 0 GalNAc-T2 FBtr0346082|FBtr0074625 18495065|18495182 18496408|18496408 X - 18495674 18495854 3'utr GalNAc-T2 FlyBase G68714.1 GAAAATCATCACAATTAGCTGATAGTGAACCCATTCCCATTTCGATCGGCGAATCTCATACAATAGATATTCAATTGATATTTGGGAGGATCCAAGCCTGGGGGATTTCCGTGCCGACCTCGTGTGTGTGTGTCCTTGCGTATGAGTGAGAGAATGCGATGGGTATAGAGCGGAAGCGAAT 23 18495781 0.986558614 15 20 163 0.888888889 1.079181246 0.111111111 0.173913043 0.296296296 23 2 1 24 X:18495674-18495854 8 GalNAc-T2 FBtr0074625|FBtr0346082 18495182|18495065 18496408|18496408 TGATATTT 8mer-m1 dme-miR-283-5p X - 18495727 18495811 3'utr GalNAc-T2 FlyBase G51688.1 GATCGGCGAATCTCATACAATAGATATTCAATTGATATTTGGGAGGATCCAAGCCTGGGGGATTTCCGTGCCGACCTCGTGTGTG 12 18495780 0.985284187 6 12 74 1 1.380211242 0.25 0.583333333 0.791666667 12 0 0 24 X:18495727-18495811 8 5.5 5662 FBgn0030930 489.5666667 17.31333333 26.39333333 0.011234425 0.31767424 0.208385956 2 1 1.5 0.01 dme-miR-932-5p 7mer-m8 GGAATTG X 18496282 18496288 - X_18496282_18496288_- 0.70297287 0.70297287 0.70297287 0 GalNAc-T2 FBtr0074624|FBtr0346082|FBtr0074625 18496082|18495065|18495182 18496408|18496408|18496408 X - 18496261 18496368 3'utr GalNAc-T2 FlyBase G68716.1 AAGGAATGGATCACAAGGGTTTCAGCCGGGGCAACGGGGGCGATATTTTAGACAAAAGCAATTTAGTGAAAATGAGAAATGGAATTGTTGTTGGTTTTGTAACGCATA 42 18496306 0.947561206 12 39 202 0.957446809 1.352182518 0.191489362 0.095238095 0.191489362 42 1 1 45 X:18496261-18496368 7 GalNAc-T2 FBtr0074625|FBtr0346082|FBtr0074624 18495182|18495065|18496082 18496408|18496408|18496408 GGAATTG 7mer-m8 dme-miR-932-5p X - 18496268 18496368 3'utr GalNAc-T2 FlyBase G51689.1 AAGGAATGGATCACAAGGGTTTCAGCCGGGGCAACGGGGGCGATATTTTAGACAAAAGCAATTTAGTGAAAATGAGAAATGGAATTGTTGTTGGTTTTGTA 21 18496306 0.963376422 10 20 105 0.965517241 1.447158031 0.206896552 0.285714286 0.482758621 21 1 0 28 X:18496268-18496368 7 8 5663 FBgn0030930 489.5666667 17.31333333 26.39333333 0.016340982 0.462071621 0.303106845 18 18 18 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 18501681 18501686 - X_18501681_18501686_- 1 1 1 0 Wnt5 FBtr0343046|FBtr0074623 18501399|18501554 18501837|18501837 X - 18501664 18501708 3'utr Wnt5 FlyBase G68722.1 AATTTACCGGCTTTTAAGCACTACCAAAATCAATCGGCGGATAAC 7 18501694 0.979072241 3 7 45 1 0.903089987 0 0.142857143 0.25 7 0 0 8 X:18501664-18501708 6 Wnt5 FBtr0343046|FBtr0074623 18501399|18501554 18501837|18501837 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X - 18501664 18501712 3'utr Wnt5 FlyBase G51693.1 TACTAATTTACCGGCTTTTAAGCACTACCAAAATCAATCGGCGGATAAC 6 18501695 0.976464548 6 6 36 1 1 0 0.5 0.7 6 0 0 10 X:18501664-18501712 6 6 5664 FBgn0010194 534.6666667 16.08666667 24.67666667 0.011221945 0.372979693 0.243144671 8 9 8.5 0.01 dme-miR-1012-3p 7mer-A1 TGACTAA X 18501798 18501804 - X_18501798_18501804_- 0.823349562 0.823349562 0.823349562 0 Wnt5 FBtr0343046|FBtr0074623 18501399|18501554 18501837|18501837 X - 18501770 18501812 3'utr Wnt5 FlyBase G68723.1 AATGTTTGTGACTAAGCCATGAAGGAAATAATCGTATTTAAAC 6 18501809 0.982473773 4 6 32 1 0.954242509 0 0.5 0.666666667 6 0 0 9 X:18501770-18501812 7 Wnt5 FBtr0343046|FBtr0074623 18501399|18501554 18501837|18501837 TGACTAA 7mer-A1 dme-miR-1012-3p X - 18501782 18501839 stop_codon Wnt5 FlyBase G51694.1 AGAGCGTTGATTGAATTCGAATGTCTTAATGTTTGTGACTAAGCCATGAAGGAAATAA 8 18501793 0.933876318 5 7 36 1 1.230448921 0.588235294 0.875 0.941176471 8 0 0 17 X:18501782-18501839 7 5.5 5665 FBgn0010194 534.6666667 16.08666667 24.67666667 0.010286783 0.341898052 0.222882615 5 -11 -3 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 18520394 18520399 + X_18520394_18520399_+ 1 1 1 0 Aats-his FBtr0333806|FBtr0333804|FBtr0074593|FBtr0333805 18520197|18520197|18520197|18520197 18520445|18520445|18520445|18520445 X + 18520300 18520408 3'utr Aats-his FlyBase G62663.1 ACGTTTTGTATTCTTGGTGTCCTGGCCGGAGGCGCCGCGTGCTACTATGCTTAGGTCTACAGTGTAACCATAGGAATAAGTGCGGACAACTTATACCAAAATGAACACT 72 18520393 0.876923305 17 69 393 0.9625 1.58546073 0.275 0.097222222 0.1875 72 2 1 77 X:18520300-18520408 6 Aats-his FBtr0333805|FBtr0074593|FBtr0333804|FBtr0333806 18520197|18520197|18520197|18520197 18520445|18520445|18520445|18520445 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 18520300 18520405 3'utr Aats-his FlyBase G47277.2 ACGTTTTGTATTCTTGGTGTCCTGGCCGGAGGCGCCGCGTGCTACTATGCTTAGGTCTACAGTGTAACCATAGGAATAAGTGCGGACAACTTATACCAAAATGAAC 56 18520393 0.907422703 15 52 310 0.92 1.361727836 0.12 0.232142857 0.426666667 56 4 2 69 X:18520300-18520405 6 25.5 5666 FBgn0027087 817.9566667 44.05 67.41 0.031175246 0.578887628 0.378282154 1 1 1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 1852482 1852487 + X_1852482_1852487_+ 1 1 1 0 CG42666 FBtr0332901|FBtr0332901|FBtr0332901|FBtr0302657|FBtr0302657|FBtr0302657|FBtr0302656|FBtr0302656|FBtr0302656|FBtr0302655|FBtr0302655|FBtr0302655|FBtr0309968|FBtr0309968|FBtr0309968|FBtr0309967|FBtr0309967|FBtr0309967|FBtr0309969|FBtr0309969|FBtr0309969|FBtr0302654|FBtr0302654|FBtr0302654|FBtr0302658|FBtr0302658|FBtr0302658|FBtr0309966|FBtr0309966|FBtr0309966|FBtr0302659|FBtr0302659|FBtr0302659 1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459 1853667|1853667|1853667|1852866|1852866|1852866|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1853667|1853667|1853667 X + 1852426 1852619 stop_codon CG42666 FlyBase G58062.1 GTGAGCTGGATCCCGCTTGGAGCTGGGACGATTAGAGGACTCGTTCGGGTGCGAATCTGTGACATTTGGGGTGGGGTGGGGCATTGGGGGATGGGCAGCAAGTACTTTTAGTTGTTAAGCCAGCTCGTAATAGTACTGTATTCAAAAAGAAAAACACAATCGTAAAATCTCAGCTGGGTATCTCTCCTGGCAAT 133 1852481 0.813179732 34 113 825 0.871794872 1.531478917 0.384615385 0.165413534 0.288461538 133 17 3 136 X:1852426-1852619 6 CG42666 FBtr0309967|FBtr0309967|FBtr0309967|FBtr0309969|FBtr0309969|FBtr0309969|FBtr0302655|FBtr0302655|FBtr0302655|FBtr0309968|FBtr0309968|FBtr0309968|FBtr0302657|FBtr0302657|FBtr0302657|FBtr0332901|FBtr0332901|FBtr0332901|FBtr0302659|FBtr0302659|FBtr0302659|FBtr0309966|FBtr0309966|FBtr0309966|FBtr0302656|FBtr0302656|FBtr0302656|FBtr0302658|FBtr0302658|FBtr0302658|FBtr0302654|FBtr0302654|FBtr0302654 1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459 1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852866|1852866|1852866|1853667|1853667|1853667|1853667|1853667|1853667|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X + 1852428 1852619 stop_codon CG42666 FlyBase G43925.1 GAGCTGGATCCCGCTTGGAGCTGGGACGATTAGAGGACTCGTTCGGGTGCGAATCTGTGACATTTGGGGTGGGGTGGGGCATTGGGGGATGGGCAGCAAGTACTTTTAGTTGTTAAGCCAGCTCGTAATAGTACTGTATTCAAAAAGAAAAACACAATCGTAAAATCTCAGCTGGGTATCTCTCCTGGCAAT 89 1852481 0.981583078 24 77 555 0.888888889 1.630088715 0.243055556 0.449438202 0.659722222 89 14 2 128 X:1852428-1852619 6 41 5667 FBgn0261548 1054.043333 36.35 55.79666667 0.038897832 1.127922971 0.734810921 1 1 1 0.01 dme-miR-190-5p 6mer3-8 ACATAT X 1852699 1852704 + X_1852699_1852704_+ 1 0.999994612 0.999997306 3.82E-06 CG42666 FBtr0332901|FBtr0302657|FBtr0302656|FBtr0302655|FBtr0309968|FBtr0309967|FBtr0309969|FBtr0302654|FBtr0302658|FBtr0309966|FBtr0302659 1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459 1853667|1852866|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1853667 X + 1852660 1852701 5'utr CG42666 FlyBase G58063.1 ACGTATAGGTGCCCATTGCCAGGGGTTGGGTCAGCATATACA 75 1852685 0.75209989 8 73 403 0.977272727 1.934498451 0.170454545 0.146666667 0.272727273 75 2 0 86 X:1852660-1852701 3 CG42666 FBtr0309967|FBtr0309969|FBtr0302655|FBtr0309968|FBtr0302657|FBtr0332901|FBtr0302659|FBtr0309966|FBtr0302656|FBtr0302658|FBtr0302654 1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459 1852933|1852933|1852933|1852933|1852866|1853667|1853667|1852933|1852933|1852933|1852933 ACATAT 6mer3-8 dme-miR-190-5p X + 1852663 1852700 5'utr CG42666 FlyBase G43926.1 TATAGGTGCCCATTGCCAGGGGTTGGGTCAGCATATAC 47 1852685 0.781662857 5 43 245 0.882352941 1.77815125 0.25 0.361702128 0.558823529 47 8 0 60 X:1852663-1852700 2 4.5 5668 FBgn0261548 1054.043333 36.35 55.79666667 0.004269274 0.123796424 0.080649979 14 14 14 0.01 dme-miR-12-5p 6mer2-7 ATACTC X 1853220 1853225 + X_1853220_1853225_+ 1 1 1 0 CG42666 FBtr0332901|FBtr0302659 1852459|1852459 1853667|1853667 X + 1853196 1853234 3'utr CG42666 FlyBase G58065.1 TTTTTTTAACGAATAAAGCATCTCATACTCGTATACAAA 17 1853221 0.747268691 3 17 91 1 1.322219295 0 0.235294118 0.380952381 17 0 0 21 X:1853196-1853234 6 CG42666 FBtr0332901|FBtr0302659 1852459|1852459 1853667|1853667 ATACTC 6mer2-7 dme-miR-12-5p X + 1853196 1853230 3'utr CG42666 FlyBase G43929.1 TTTTTTTAACGAATAAAGCATCTCATACTCGTATA 9 1853221 0.741003281 2 9 53 1 1.146128036 0.071428571 0.444444444 0.642857143 9 0 0 14 X:1853196-1853230 6 13 5669 FBgn0261548 1054.043333 36.35 55.79666667 0.012333459 0.357634113 0.232988828 -1 -1 -1 0.01 dme-miR-276a-3p 7mer-A1 GTTCCTA X 1853525 1853531 + X_1853525_1853531_+ 0.823349562 0.823349562 0.823349562 0 CG42666 FBtr0332901|FBtr0302659 1852459|1852459 1853667|1853667 X + 1853499 1853551 3'utr CG42666 FlyBase G58068.1 GAGGAGCACTTTAATTGAAAATCGATGTTCCTAGCAGAATAAGTTTCAGCACA 53 1853524 0.949692328 2 52 278 0.985074627 1.819543936 0.447761194 0.188679245 0.358208955 53 1 0 66 X:1853499-1853551 7 CG42666 FBtr0332901|FBtr0302659 1852459|1852459 1853667|1853667 GTTCCTA 7mer-A1 dme-miR-276a-3p X + 1853511 1853550 3'utr CG42666 FlyBase G43930.1 AATTGAAAATCGATGTTCCTAGCAGAATAAGTTTCAGCAC 38 1853524 0.726038478 4 37 199 0.983333333 1.469822016 0.4 0.421052632 0.633333333 38 0 1 59 X:1853511-1853550 7 45 5670 FBgn0261548 1054.043333 36.35 55.79666667 0.042692742 1.237964237 0.806499791 1 1 1 0.01 dme-miR-1012-3p 6mer3-8 TTGACT X 18571345 18571350 + X_18571345_18571350_+ 0.99902422 0.983292706 0.991158463 0.01112385 Bx FBtr0340365|FBtr0340364|FBtr0340366|FBtr0340363|FBtr0340367 18570935|18570935|18570935|18570935|18571268 18571726|18571726|18572809|18571726|18571726 X + 18571197 18571367 stop_codon Bx FlyBase G62666.1 AGGAGGAGGAGGCGTTGGCAGCATCGGAAGCGGCTGCAAGCGCTACCAAAGAAAGTTTTACAACCGCAACTGAGGAAATCGACGGGCGAGAAAACGCTAGCGGAAAGGATGCAGAAATCCAGAATCGATATTCAAATCTTCGTTTGCTTTGACTGAGTTCAAGTTTTATAG 39 18571345 0.986008934 17 35 277 0.880952381 1.568201724 0.119047619 0.076923077 0.142857143 39 5 0 37 X:18571197-18571367 6 Bx FBtr0340366|FBtr0340363|FBtr0340365|FBtr0340364|FBtr0340367 18570935|18570935|18570935|18570935|18571268 18572809|18571726|18571726|18571726|18571726 TTGACT 6mer3-8 dme-miR-1012-3p X + 18571328 18571376 3'utr Bx FlyBase G47281.1 TCAAATCTTCGTTTGCTTTGACTGAGTTCAAGTTTTATAGTTTTAAAGG 15 18571346 0.968178929 4 12 169 0.863636364 0.801632346 0.090909091 0.333333333 0.545454545 15 1 2 19 X:18571328-18571376 6 17.5 5671 FBgn0265598 121.1466667 5.323333333 8.24 0.144453005 3.287413901 2.123786408 0 -1 -0.5 0.01 dme-miR-13b-2-5p 6mer2-7 TTGACG X 18571554 18571559 + X_18571554_18571559_+ 1 1 1 0 Bx FBtr0340365|FBtr0340364|FBtr0340366|FBtr0340363|FBtr0340367 18570935|18570935|18570935|18570935|18571268 18571726|18571726|18572809|18571726|18571726 X + 18571519 18571574 3'utr Bx FlyBase G62668.1 CCACTACATACTGTACATATTTTCCTTGTAAACTGTTGACGTATTAGCGGGATCCT 12 18571555 0.984178398 4 12 98 1 1.079181246 0.083333333 0 0 12 0 0 12 X:18571519-18571574 6 Bx FBtr0340366|FBtr0340363|FBtr0340365|FBtr0340364|FBtr0340367 18570935|18570935|18570935|18570935|18571268 18572809|18571726|18571726|18571726|18571726 TTGACG 6mer2-7 dme-miR-13b-2-5p X + 18571541 18571575 3'utr Bx FlyBase G47282.1 TCCTTGTAAACTGTTGACGTATTAGCGGGATCCTT 5 18571555 0.974366194 2 5 43 1 0.903089987 0.625 0.6 0.75 5 0 0 8 X:18571541-18571575 6 7.5 5672 FBgn0265598 121.1466667 5.323333333 8.24 0.061908431 1.408891672 0.910194175 -1 -1 -1 0.01 dme-miR-282-5p 7mer-A1 GAGGCTA X 18572070 18572076 + X_18572070_18572076_+ 0.823349562 0.823349562 0.823349562 0 Bx FBtr0340366 18570935 18572809 X + 18572047 18572097 3'utr Bx FlyBase G62669.1 ATTATTTAAGTTTAGTTTAGTGCGAGGCTAAAGAATGTTCTTTCCACGGCG 16 18572075 0.968843636 4 16 176 1 1.255272505 0.222222222 0.125 0.222222222 16 0 0 18 X:18572047-18572097 7 Bx FBtr0340366 18570935 18572809 GAGGCTA 7mer-A1 dme-miR-282-5p X + 18572015 18572079 3'utr Bx FlyBase G47284.1 ATTTTAAGTCTGTTGGAGCAACGTTGTTGATTATTATTTAAGTTTAGTTTAGTGCGAGGCTAAAG 8 18572062 0.799982577 6 7 57 1 1.113943352 0.615384615 0.375 0.615384615 8 0 0 13 X:18572015-18572079 7 10 5673 FBgn0265598 121.1466667 5.323333333 8.24 0.082544574 1.878522229 1.213592233 -5 8 1.5 0.01 dme-miR-305-5p 6mer3-8 AGTACA X 1859484 1859489 - X_1859484_1859489_- 1 1 1 0 deltaCOP FBtr0301926|FBtr0070371 1859139|1859139 1859518|1859518 X - 1859413 1859497 3'utr deltaCOP FlyBase G64056.1 ACCTAAGTAGTACATAAATATACATAATTTCCCGGGGTCATCCGATGCGATGCAATTAATTCAACTGCTGCAGCATGTTGAGAAT 73 1859479 0.798803121 13 71 530 0.975903614 1.908485019 0.024096386 0.136986301 0.240963855 73 2 0 81 X:1859413-1859497 6 deltaCOP FBtr0070371|FBtr0301926 1859139|1859139 1859518|1859518 AGTACA 6mer3-8 dme-miR-305-5p X - 1859387 1859495 3'utr deltaCOP FlyBase G48290.1 CTAAGTAGTACATAAATATACATAATTTCCCGGGGTCATCCGATGCGATGCAATTAATTCAACTGCTGCAGCATGTTGAGAATTATTTTTCCATGTGCGAACTTTACAT 34 1859479 0.98424196 12 32 253 0.962962963 1.414973348 0.018518519 0.382352941 0.611111111 34 1 1 52 X:1859387-1859495 6 35 5674 FBgn0028969 895.2966667 49.84666667 75.93 0.039093187 0.70215327 0.460950876 -10 -10 -10 0.01 dme-bantam-3p 7mer-A1 GATCTCA X 1862231 1862237 - X_1862231_1862237_- 0.823344289 0.823349445 0.823346867 3.61E-06 CG14814 FBtr0070369|FBtr0070370|FBtr0339494 1862133|1862133|1862007 1862327|1862327|1862327 X - 1862212 1862272 3'utr CG14814 FlyBase G64071.1 TGGTATATCATAGACAATTTGAAAAACTTAACTGAGATCTCAGTTCGTGCGAAGTAGTAGA 12 1862240 0.973021708 4 12 80 1 1.146128036 0.142857143 0.166666667 0.285714286 12 0 0 14 X:1862212-1862272 7 CG14814 FBtr0339494|FBtr0070370|FBtr0070369 1862007|1862133|1862133 1862327|1862327|1862327 GATCTCA 7mer-A1 dme-bantam-3p X - 1862222 1862253 3'utr CG14814 FlyBase G48303.1 TGAAAAACTTAACTGAGATCTCAGTTCGTGCG 5 1862240 0.706221503 2 5 32 1 0.77815125 0 0.2 0.333333333 5 0 0 6 X:1862222-1862253 7 7 5675 FBgn0023515 470.3333333 16.16 24.75 0.014883062 0.433168317 0.282828283 3 3 3 0.01 dme-miR-999-3p 7mer-A1 GTTAACA X 18624336 18624342 - X_18624336_18624342_- 0.823349562 0.823349562 0.823349562 0 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 X - 18624265 18624364 3'utr wgn FlyBase G68734.1 AACGCATATAGACGCACGTATTGTTAACATCACCCATATCCCATATCCTAGTACTAGTATCCAGAGTAAACAGTATCCTATAATCCCACCAACAACACAC 18 18624341 0.978538704 9 16 103 0.894736842 1.230448921 0 0.055555556 0.105263158 18 2 0 17 X:18624265-18624364 7 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 GTTAACA 7mer-A1 dme-miR-999-3p X - 18624314 18624363 3'utr wgn FlyBase G51702.1 ACGCATATAGACGCACGTATTGTTAACATCACCCATATCCCATATCCTAG 15 18624342 0.985775645 5 13 102 0.882352941 0.875061263 0 0.133333333 0.235294118 15 1 1 15 X:18624314-18624363 7 12 5676 FBgn0030941 765.4933333 38.51666667 59.04666667 0.015676165 0.31155344 0.203229084 -1 0 -0.5 0.01 dme-miR-190-5p 8mer-A1 ACATATCA X 18624381 18624388 - X_18624381_18624388_- 0.612817321 0.612817321 0.612817321 0 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 X - 18624365 18624426 3'utr wgn FlyBase G68735.1 ATCGTTGCGGAGTGGAACGAAACCAAGTAATATTGGCAACATATCAGCTTCTATATGCATGG 14 18624394 0.987569503 8 10 114 0.705882353 1.079181246 0.058823529 0.214285714 0.352941176 14 5 0 12 X:18624365-18624426 8 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 ACATATCA 8mer-A1 dme-miR-190-5p X - 18624366 18624407 3'utr wgn FlyBase G51703.1 AAACCAAGTAATATTGGCAACATATCAGCTTCTATATGCATG 7 18624398 0.851995796 6 7 52 1 1.079181246 0 0.428571429 0.666666667 7 0 0 12 X:18624366-18624407 8 9.5 5677 FBgn0030941 765.4933333 38.51666667 59.04666667 0.012410297 0.246646473 0.160889692 6 10 8 0.01 dme-miR-2a-2-5p 7mer-m1 GATGAGG X 18624546 18624552 - X_18624546_18624552_- 0.825582373 0.825582373 0.825582373 0 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 X - 18624454 18624599 3'utr wgn FlyBase G68736.1 TGGGAATCCCGAGCGATGCGGCAAAATGTTTTGTACATACTCGTAGAGATGAGGCATGTGGCACCGCCCACGTATACCCACGTATATGATAGAAGCGATTTAGATTAACAAATCTCTACTTAATGTAAATATTAAGGCGATCGAAC 153 18624550 0.912189723 20 146 744 0.952095808 1.599337133 0.191616766 0.091503268 0.167664671 153 5 3 159 X:18624454-18624599 7 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 GATGAGG 7mer-m1 dme-miR-2a-2-5p X - 18624474 18624652 3'utr wgn FlyBase G51704.1 TGTTGACTTGTTTGTAATGCGCGGACAGTTGAGGACGCGGGCTTCCCGTTGTGTGGGAATCCCGAGCGATGCGGCAAAATGTTTTGTACATACTCGTAGAGATGAGGCATGTGGCACCGCCCACGTATACCCACGTATATGATAGAAGCGATTTAGATTAACAAATCTCTACTTAATGT 124 18624550 0.924158568 21 121 586 0.983783784 2.260071388 0.308108108 0.379032258 0.583783784 124 3 0 182 X:18624474-18624652 7 101 5678 FBgn0030941 765.4933333 38.51666667 59.04666667 0.131941058 2.622241454 1.71051146 -2 -2 -2 0.01 dme-miR-305-5p 7mer-A1 GTACAAA X 18624777 18624783 - X_18624777_18624783_- 0.782911824 0.782911824 0.782911824 0 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 X - 18624707 18624833 3'utr wgn FlyBase G68738.1 ACGATACGCAAACGGAACCGGAAACGTAAATGGATTAGAGAAAGAACTTTGTACAAACAGCCGCTTAAAAGTAGGAGGAGGACGGAGGAAGGAAACCGAAACTATTATTATTTTTTATATTATTAAT 192 18624785 0.949667208 10 183 734 0.956896552 2.045322979 0.211206897 0.171875 0.314655172 192 9 1 222 X:18624707-18624833 7 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 GTACAAA 7mer-A1 dme-miR-305-5p X - 18624727 18624862 3'utr wgn FlyBase G51705.1 GCGGGACGAAGCGAGAATGGATCCGGAACACGATACGCAAACGGAACCGGAAACGTAAATGGATTAGAGAAAGAACTTTGTACAAACAGCCGCTTAAAAGTAGGAGGAGGACGGAGGAAGGAAACCGAAACTATTA 161 18624785 0.931806281 12 153 561 0.94893617 2.047274867 0.293617021 0.354037267 0.557446809 161 11 1 223 X:18624727-18624862 7 152.5 5679 FBgn0030941 765.4933333 38.51666667 59.04666667 0.199217934 3.959324968 2.582702947 2 2 2 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA X 18635679 18635684 - X_18635679_18635684_- 1 0.999996999 0.9999985 2.12E-06 Rip11 FBtr0343020|FBtr0343020|FBtr0343021|FBtr0343021|FBtr0301545|FBtr0301545|FBtr0343019|FBtr0343019|FBtr0074616|FBtr0074616 18635640|18635640|18635640|18635640|18635640|18635640|18635640|18635640|18635640|18635640 18636833|18636833|18636312|18636312|18636312|18636312|18636833|18636833|18637354|18637354 X - 18635667 18635717 3'utr Rip11 FlyBase G68744.1 CACAGTTGAAATATGTTGATACTACAATGATTTTACTTATTGATATAAACG 20 18635689 0.745427231 11 17 180 0.863636364 1.278753601 0.318181818 0.1 0.181818182 20 3 0 19 X:18635667-18635717 6 Rip11 FBtr0074616|FBtr0074616|FBtr0343019|FBtr0343019|FBtr0301545|FBtr0301545|FBtr0343021|FBtr0343021|FBtr0343020|FBtr0343020 18635640|18635640|18635640|18635640|18635640|18635640|18635640|18635640|18635640|18635640 18637354|18637354|18636833|18636833|18636312|18636312|18636312|18636312|18636833|18636833 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" X - 18635660 18635720 3'utr Rip11 FlyBase G51709.1 ACACACAGTTGAAATATGTTGATACTACAATGATTTTACTTATTGATATAAACGCAAGCAA 12 18635690 0.978335919 7 12 99 1 1.278753601 0 0.5 0.684210526 12 0 0 19 X:18635660-18635720 6 8.5 5680 FBgn0027335 6668.076667 280.47 431.2966667 0.00127473 0.030306272 0.019708012 5 6 5.5 0.01 dme-miR-317-3p 6mer3-8 TGTGTT X 18635907 18635912 - X_18635907_18635912_- 0.998710839 0.999905235 0.999308037 0.000844568 Rip11 FBtr0343020|FBtr0343021|FBtr0301545|FBtr0343019|FBtr0074616 18635640|18635640|18635640|18635640|18635640 18636833|18636312|18636312|18636833|18637354 X - 18635896 18635968 3'utr Rip11 FlyBase G68746.1 AAGCGATTTGTCGTGTTGCGAGTCCTTGTCAATTGATTGAAATTATCCGAAAGTATTGTGTTTGTTTTTTTGT 15 18635913 0.829821829 9 15 139 1 1.255272505 0.111111111 0.2 0.333333333 15 0 0 18 X:18635896-18635968 6 Rip11 FBtr0074616|FBtr0343019|FBtr0301545|FBtr0343021|FBtr0343020 18635640|18635640|18635640|18635640|18635640 18637354|18636833|18636312|18636312|18636833 TGTGTT 6mer3-8 dme-miR-317-3p X - 18635902 18635961 3'utr Rip11 FlyBase G51711.1 TTGTCGTGTTGCGAGTCCTTGTCAATTGATTGAAATTATCCGAAAGTATTGTGTTTGTTT 14 18635926 0.984816777 7 14 115 1 1.342422681 0.227272727 0.428571429 0.636363636 14 0 0 22 X:18635902-18635961 6 8 5681 FBgn0027335 6668.076667 280.47 431.2966667 0.001199746 0.02852355 0.018548717 1 14 7.5 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT X 18636224 18636229 - X_18636224_18636229_- 1 1 1 0 Rip11 FBtr0343020|FBtr0343021|FBtr0301545|FBtr0343019|FBtr0074616 18635640|18635640|18635640|18635640|18635640 18636833|18636312|18636312|18636833|18637354 X - 18636217 18636252 3'utr Rip11 FlyBase G68748.1 AGATCTGCGGAGGTTGCTCCGGAAGCTGTTGGGTCG 15 18636238 0.683627989 7 14 84 0.941176471 1.204119983 0.058823529 0.133333333 0.235294118 15 1 0 16 X:18636217-18636252 6 Rip11 FBtr0074616|FBtr0343019|FBtr0301545|FBtr0343021|FBtr0343020 18635640|18635640|18635640|18635640|18635640 18637354|18636833|18636312|18636312|18636833 AGCTGT 6mer3-8 dme-miR-1008-3p X - 18636221 18636258 3'utr Rip11 FlyBase G51714.1 TGGAGAAGATCTGCGGAGGTTGCTCCGGAAGCTGTTGG 12 18636238 0.738823768 3 12 62 1 1.255272505 0 0.333333333 0.555555556 12 0 0 18 X:18636221-18636258 6 12.5 5682 FBgn0027335 6668.076667 280.47 431.2966667 0.001874604 0.044568046 0.028982371 9 9 9 0.01 dme-miR-277-3p 8mer-A1 TGCATTTA X 18636806 18636813 - X_18636806_18636813_- 0.625364269 0.625364269 0.625364269 0 Rip11 FBtr0343020|FBtr0343019|FBtr0074616 18635640|18635640|18635640 18636833|18636833|18637354 X - 18636755 18636833 5'utr Rip11 FlyBase G68750.1 GTGCTGCGCATGTTGCAAATTGCATTTAAGTAGACACTTAACCAACAAATCCCAACAACAACAACATCACCACCACCAA 47 18636814 0.983310187 5 45 344 0.981818182 1.73239376 0.309090909 0.170212766 0.290909091 47 1 0 54 X:18636755-18636833 8 Rip11 FBtr0074616|FBtr0343019|FBtr0343020 18635640|18635640|18635640 18637354|18636833|18636833 TGCATTTA 8mer-A1 dme-miR-277-3p X - 18636784 18636835 stop_codon Rip11 FlyBase G51716.1 AAGTGCTGCGCATGTTGCAAATTGCATTTAAGTAGACACTTAACCAACAAAT 27 18636814 0.844795357 4 25 202 0.973684211 1.568201724 0.421052632 0.37037037 0.552631579 27 1 0 37 X:18636784-18636835 8 35.5 5683 FBgn0027335 6668.076667 280.47 431.2966667 0.005323874 0.126573252 0.082309934 1 1 1 0.01 dme-miR-2a-2-5p 7mer-A1 GATGAGA X 18653527 18653533 - X_18653527_18653533_- 0.782911824 0.782911824 0.782911824 0 CG6659 FBtr0074613|FBtr0074612 18653390|18653390 18653985|18653985 X - 18653513 18653594 3'utr CG6659 FlyBase G68778.1 AAATACTTTCGTTAAGTTTAAGCTAAGCTTTTTACATTTACGCATGTAGTATACATATGACGATGAGACGCGTGTGGCAACG 12 18653531 0.974475456 5 11 72 1 1.113943352 0 0.083333333 0.153846154 12 0 0 13 X:18653513-18653594 7 CG6659 FBtr0074613|FBtr0074612 18653390|18653390 18653985|18653985 GATGAGA 7mer-A1 dme-miR-2a-2-5p X - 18653496 18653556 3'utr CG6659 FlyBase G51739.1 TACGCATGTAGTATACATATGACGATGAGACGCGTGTGGCAACGAAAGTGGCTGCATGTGG 17 18653531 0.974934976 3 16 70 1 1.414973348 0.038461538 0.411764706 0.615384615 17 0 0 26 X:18653496-18653556 7 11 5684 FBgn0030946 482.2966667 17.24333333 26.43666667 0.022807539 0.637927702 0.416088766 -2 -2 -2 0.01 dme-miR-283-5p 6mer3-8 TGATAT X 18653779 18653784 - X_18653779_18653784_- 1 1 1 0 CG6659 FBtr0074613|FBtr0074612 18653390|18653390 18653985|18653985 X - 18653741 18653818 3'utr CG6659 FlyBase G68779.1 AATCCCAAATCCCGATCCCGCGTAGTAGCTGATTTGATATGGCAGATTGGCGATTAGAAGGAGGCCCCTTCCGCTAGA 10 18653772 0.958460538 6 10 49 1 1.041392685 0.363636364 0.1 0.181818182 10 0 0 11 X:18653741-18653818 6 CG6659 FBtr0074613|FBtr0074612 18653390|18653390 18653985|18653985 TGATAT 6mer3-8 dme-miR-283-5p X - 18653743 18653844 3'utr CG6659 FlyBase G51741.1 CGGATGCCCGAACACATCTCGCACCCAATCCCAAATCCCGATCCCGCGTAGTAGCTGATTTGATATGGCAGATTGGCGATTAGAAGGAGGCCCCTTCCGCTA 8 18653779 0.974690541 7 8 41 1 1.204119983 0.125 0.625 0.8125 8 0 0 16 X:18653743-18653844 6 4 5685 FBgn0030946 482.2966667 17.24333333 26.43666667 0.008293651 0.23197371 0.151305006 -12 -5 -8.5 0.01 dme-miR-1008-3p 7mer-m8 AGCTGTG X 18653909 18653915 - X_18653909_18653915_- 0.671646704 0.671760212 0.671703458 8.03E-05 CG6659 FBtr0074613|FBtr0074612 18653390|18653390 18653985|18653985 X - 18653831 18653992 stop_codon CG6659 FlyBase G68780.1 CATATAGGGCTGGCCGTCCACGGAGGCGGCGCGATGATGGAATGCTGGAATCGTGTTGTGTTGTACGTAGCTGTGTGAGCTGTGTGACTAGGATTTAGCATTTTACGATGTGTGTGTATTATGATTACGTTTAGTATTGCCCCAACCTCGGATGCCCGAACA 45 18653917 0.882371976 19 41 353 0.92 1.662757832 0.22 0.111111111 0.2 45 4 0 46 X:18653831-18653992 7 CG6659 FBtr0074613|FBtr0074612 18653390|18653390 18653985|18653985 AGCTGTG 7mer-m8 dme-miR-1008-3p X - 18653857 18654001 stop_codon CG6659 FlyBase G51742.1 CGAGATGTCCATATAGGGCTGGCCGTCCACGGAGGCGGCGCGATGATGGAATGCTGGAATCGTGTTGTGTTGTACGTAGCTGTGTGAGCTGTGTGACTAGGATTTAGCATTTTACGATGTGTGTGTATTATGATTACGTTTAGTA 43 18653917 0.982407413 15 40 306 0.954545455 1.799340549 0.303030303 0.348837209 0.575757576 43 3 0 63 X:18653857-18654001 7 26 5686 FBgn0030946 482.2966667 17.24333333 26.43666667 0.053908728 1.507829113 0.983482537 2 2 2 0.01 dme-miR-283-5p 6mer3-8 TGATAT X 18660796 18660801 + X_18660796_18660801_+ 1 1 1 0 fu FBtr0074602 18660455 18661204 X + 18660672 18660796 3'utr fu FlyBase G62686.1 GAAGCAAAGGACAGGAGTCAGAGAGTGTAGACGATGCAAGCTCCCCCAAGTCATTACAAACATCTCATCGCTTCAACTAAAACTGCTAAGGTGTAGTCAACCATTCAGCTAAAGAATTCTCATTT 29 18660794 0.980977699 13 23 159 0.878787879 1.161368002 0.242424242 0.103448276 0.212121212 29 3 1 29 X:18660672-18660796 1 fu FBtr0074602 18660455 18661204 TGATAT 6mer3-8 dme-miR-283-5p X + 18660750 18660806 3'utr fu FlyBase G47297.1 AAAACTGCTAAGGTGTAGTCAACCATTCAGCTAAAGAATTCTCATTTGATATAGTTC 9 18660775 0.979284727 5 9 68 1 1.176091259 0.533333333 0.555555556 0.733333333 9 0 0 15 X:18660750-18660806 6 9.5 5687 FBgn0001079 159.36 5.946666667 9.103333333 0.059613454 1.597533632 1.043573782 2 21 11.5 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA X 18661019 18661024 + X_18661019_18661024_+ 1 1 1 0 fu FBtr0074602 18660455 18661204 X + 18661004 18661049 3'utr fu FlyBase G62688.1 ATTCAAGTGTGGTTTGTGCAAAATAGATTGATAGCATTATAGTTTG 10 18661017 0.72867858 3 8 86 0.909090909 1 0.181818182 0.1 0.181818182 10 1 0 10 X:18661004-18661049 6 fu FBtr0074602 18660455 18661204 GTGCAA 6mer3-8 dme-miR-92b-3p X + 18661002 18661058 3'utr fu FlyBase G47299.1 ATATTCAAGTGTGGTTTGTGCAAAATAGATTGATAGCATTATAGTTTGTATATCGAA 12 18661016 0.84731103 6 11 110 0.947368421 1.255272505 0.421052632 0.333333333 0.578947368 12 1 0 18 X:18661002-18661058 6 8.5 5688 FBgn0001079 159.36 5.946666667 9.103333333 0.053338353 1.429372197 0.933723911 2 3 2.5 0.01 dme-miR-980-3p 6mer2-7 GCAGCT X 1866406 1866411 + X_1866406_1866411_+ 1 1 1 0 MED18 FBtr0114454 1866212 1866887 X + 1866400 1866434 3'utr MED18 FlyBase G58069.1 TGGTACGCAGCTGCATGGACTGCGCCTGCACCAAT 5 1866415 0.927997848 2 4 22 0.857142857 0.77815125 0.428571429 0.4 0.571428571 5 1 0 6 X:1866400-1866434 6 MED18 FBtr0114454 1866212 1866887 GCAGCT 6mer2-7 dme-miR-980-3p X + 1866386 1866429 3'utr MED18 FlyBase G43931.1 GCGCCGGCCTACATTGGTACGCAGCTGCATGGACTGCGCCTGCA 5 1866414 0.861152648 3 4 13 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 X:1866386-1866429 6 4.5 5689 FBgn0026873 112.3333333 17.02333333 26.1 0.040059347 0.264343059 0.172413793 -9 -8 -8.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 18781249 18781254 + X_18781249_18781254_+ 1 1 1 0 CG6891 FBtr0074631|FBtr0334453|FBtr0074632 18781193|18781193|18781193 18781345|18781345|18781345 X + 18781229 18781320 3'utr CG6891 FlyBase G62699.1 TTTGCAACTCTTAACTGCTTACCAAACTGCTCCTTTCTCTTTAATTATTATGAATTAATTTTATGAAATTTAAAAACTGTACATTTTATGAA 47 18781263 0.788561177 13 40 418 0.859649123 1.088136089 0.087719298 0.14893617 0.298245614 47 5 3 49 X:18781229-18781320 6 CG6891 FBtr0334453|FBtr0074632|FBtr0074631 18781193|18781193|18781193 18781345|18781345|18781345 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 18781239 18781283 3'utr CG6891 FlyBase G47310.1 TTAACTGCTTACCAAACTGCTCCTTTCTCTTTAATTATTATGAAT 33 18781257 0.721924709 8 32 306 0.977272727 1.33243846 0.022727273 0.272727273 0.454545455 33 0 1 43 X:18781239-18781283 6 34.5 5690 FBgn0030955 851.42 106.5933333 161.8266667 0.040520542 0.323660016 0.213191069 -14 -8 -11 0.01 dme-miR-263a-5p 6mer2-7 TGCCAT X 18786305 18786310 - X_18786305_18786310_- 1 1 1 0 CG6961 FBtr0074660 18786140 18786460 X - 18786273 18786331 3'utr CG6961 FlyBase G68801.1 TAGACTAGTTTAAGTGAATTCTGCCATGTCTGTCCACTTTAGAATTTTGTGTTTAGTGA 9 18786305 0.983133943 5 7 80 0.888888889 0.903089987 0.333333333 0 0 9 1 0 8 X:18786273-18786331 6 CG6961 FBtr0074660 18786140 18786460 TGCCAT 6mer2-7 dme-miR-263a-5p X - 18786266 18786322 3'utr CG6961 FlyBase G51752.1 TTAAGTGAATTCTGCCATGTCTGTCCACTTTAGAATTTTGTGTTTAGTGAGTAAAAT 6 18786303 0.979914662 5 6 47 1 1 0 0.666666667 0.8 6 0 0 10 X:18786266-18786322 6 5 5691 FBgn0030959 210.0433333 13.48333333 20.56333333 0.023804612 0.370828183 0.24315124 -5 -7 -6 0.01 dme-miR-308-3p 7mer-m1 TGTGATT X 18793307 18793313 + X_18793307_18793313_+ 0.510310346 0.517183043 0.513746694 0.004859733 Atg101 FBtr0074635 18792553 18793517 X + 18793253 18793405 3'utr Atg101 FlyBase G62716.1 TGTTTAGATCGAGGCAAGTAGCGGTGAGGCGGTAGAAATGTATGTATAAAAGATTGTGATTGTACTTGTAGTGATTAAACTATAGTACGGACTCCATGTATCCATGGATATCCAATATGTAGACATGTATGTATGTAAATCAATGTTTATCTA 428 18793313 0.99077693 22 402 4174 0.941176471 1.490426721 0.348884381 0.140186916 0.253549696 428 15 14 464 X:18793253-18793405 7 Atg101 FBtr0074635 18792553 18793517 TGTGATT 7mer-m1 dme-miR-308-3p X + 18793255 18793389 3'utr Atg101 FlyBase G47323.1 TTTAGATCGAGGCAAGTAGCGGTGAGGCGGTAGAAATGTATGTATAAAAGATTGTGATTGTACTTGTAGTGATTAAACTATAGTACGGACTCCATGTATCCATGGATATCCAATATGTAGACATGTATGTATGTA 347 18793313 0.990353791 18 328 3332 0.940740741 1.927712462 0.368518519 0.409221902 0.62037037 347 27 5 508 X:18793255-18793389 7 373 5692 FBgn0030960 179.3333333 11.9 18.35333333 2.079925651 31.34453782 20.32328369 -6 -6 -6 0.01 dme-miR-252-5p 6mer3-8 GTACTT X 18793437 18793442 + X_18793437_18793442_+ 1 1 1 0 Atg101 FBtr0074635 18792553 18793517 X + 18793428 18793468 3'utr Atg101 FlyBase G62717.1 ACGATAAATGTACTTTACGACTTAACTAATATTGTAAAATC 17 18793442 0.736639763 6 16 125 1 1.255272505 0.055555556 0.058823529 0.111111111 17 0 0 18 X:18793428-18793468 6 Atg101 FBtr0074635 18792553 18793517 GTACTT 6mer3-8 dme-miR-252-5p X + 18793427 18793454 3'utr Atg101 FlyBase G47324.1 AACGATAAATGTACTTTACGACTTAACT 6 18793441 0.796787092 3 6 41 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 X:18793427-18793454 6 10.5 5693 FBgn0030960 179.3333333 11.9 18.35333333 0.058550186 0.882352941 0.57210316 -5 -4 -4.5 0.01 dme-miR-184-5p 8mer-m1 TGATAAGG X 1881446 1881453 - X_1881446_1881453_- 0.614713882 0.614713882 0.614713882 0 trr FBtr0070362|FBtr0070363 1881311|1881311 1882155|1882155 X - 1881418 1881483 3'utr trr FlyBase G64099.1 TCGTGCGCAACCTTCTTTGAATATATACACTGATAAGGATATGAACACCTACTTCTATTTTATTTT 21 1881460 0.961421611 9 20 159 0.958333333 1.361727836 0.25 0.142857143 0.25 21 1 0 23 X:1881418-1881483 8 trr FBtr0070362|FBtr0070363 1881311|1881311 1882155|1882155 TGATAAGG 8mer-m1 dme-miR-184-5p X - 1881430 1881477 3'utr trr FlyBase G48319.1 GCAACCTTCTTTGAATATATACACTGATAAGGATATGAACACCTACTT 15 1881459 0.954735205 6 13 96 0.818181818 0.954242509 0.318181818 0.4 0.590909091 15 3 1 18 X:1881430-1881477 8 14 5694 FBgn0023518 907.1566667 13.24 20.31 0.015432836 1.057401813 0.689315608 7 6 6.5 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA X 1881842 1881847 - X_1881842_1881847_- 1 1 1 0 trr FBtr0070362|FBtr0070363 1881311|1881311 1882155|1882155 X - 1881828 1881948 3'utr trr FlyBase G64103.1 TTATATGCTATATGCAGATATGCTCGTGGAGAGCATATGACCTTGTAAGTTTTGTATATGTGCCCACTGTAGCCAATTCGTATCCTTTATATCGCTCTTAAGTGCAAAAGTGGAGAGTGTC 23 1881850 0.871893938 9 22 179 0.903225806 1.447158031 0.129032258 0.217391304 0.419354839 23 3 0 28 X:1881828-1881948 6 trr FBtr0070362|FBtr0070363 1881311|1881311 1882155|1882155 GTGCAA 6mer3-8 dme-miR-92b-3p X - 1881831 1881932 3'utr trr FlyBase G48321.1 GATATGCTCGTGGAGAGCATATGACCTTGTAAGTTTTGTATATGTGCCCACTGTAGCCAATTCGTATCCTTTATATCGCTCTTAAGTGCAAAAGTGGAGAGT 8 1881850 0.976102413 5 8 60 1 1.176091259 0.266666667 0.5 0.733333333 8 0 0 15 X:1881831-1881932 6 5 5695 FBgn0023518 907.1566667 13.24 20.31 0.005511727 0.377643505 0.246184146 3 3 3 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA X 18831927 18831933 + X_18831927_18831933_+ 0.823349562 0.823349562 0.823349562 0 CG7101 FBtr0074639 18831799 18832123 X + 18831868 18831974 3'utr CG7101 FlyBase G62725.1 ATACTTAAGCAATGGATAAATGTAACGTTTTAATAGCGTTAATATTTTGAATTTATATCCTAGTCATCGGAAATGTTTTTCCAAACGAACTTGAATTTAAAATCGTA 150 18831925 0.884279782 16 145 1192 0.964071856 2.206825876 0.233532934 0.093333333 0.185628743 150 6 0 161 X:18831868-18831974 7 CG7101 FBtr0074639 18831799 18832123 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X + 18831752 18831972 stop_codon CG7101 FlyBase G47329.1 CTTCCGGGCCATCGATCTCGAACGGCATGTGTGTGAGGAACATCCGTAGGGCAGTCAACCTAGCCGGAATCGTAGATACCTGAGCGACATCTCACGTCCAGAACTACGATTAATATATACTTAAGCAATGGATAAATGTAACGTTTTAATAGCGTTAATATTTTGAATTTATATCCTAGTCATCGGAAATGTTTTTCCAAACGAACTTGAATTTAAAATCG 153 18831925 0.983825919 29 132 1005 0.884057971 1.359361103 0.289855072 0.296052632 0.483091787 152 17 7 183 X:18831752-18831972 7 113.5 5696 FBgn0030963 43.33333333 3.66 5.636666667 2.619230769 31.01092896 20.13601419 2 2 2 0.01 dme-miR-252-5p 7mer-m8 GTACTTA X 18832091 18832097 + X_18832091_18832097_+ 0.588299917 0.588299917 0.588299917 0 CG7101 FBtr0074639 18831799 18832123 X + 18831986 18832115 3'utr CG7101 FlyBase G62726.1 GCTGTAAAATTAATGCTTATGAGACGATTTACATTTACATCTTAGGAACTATAGACATAAGCGAATAGTTACTTTAATATAGCAAGCAGATGGCTGAAAGACAATGTACTTATATGAATAAAAAAATATC 186 18832090 0.881927067 14 179 1100 0.966346154 2.002166062 0.240384615 0.107526882 0.201923077 186 6 1 201 X:18831986-18832115 7 CG7101 FBtr0074639 18831799 18832123 GTACTTA 7mer-m8 dme-miR-252-5p X + 18832056 18832110 3'utr CG7101 FlyBase G47330.1 ACTTTAATATAGCAAGCAGATGGCTGAAAGACAATGTACTTATATGAATAAAAAA 120 18832090 0.867756336 8 116 656 0.975490196 2.298853076 0.205882353 0.408333333 0.651960784 120 5 0 199 X:18832056-18832110 7 120 5697 FBgn0030963 43.33333333 3.66 5.636666667 2.769230769 32.78688525 21.289178 1 1 1 0.01 dme-miR-307a-3p 7mer-m8 GGTTGTG X 18841222 18841228 + X_18841222_18841228_+ 0.702969497 0.661657542 0.682313519 0.029211995 Pvf1 FBtr0343604 18841137 18842901 X + 18841157 18841373 3'utr Pvf1 FlyBase G62736.1 CAGGGATCCACGGGCAGGGATTGGTTGCGATCCGGTCTGGTCTGATCTGGTCTGGTCTGGGGAACGGTTGTGCTCGTCCTTGGTTGGTTTGCGGTTGGTTCCTGGTGGTGGCTCCCTAGCTTAAGCTGTCCCAACAAGTTCCTCGCTTATTTATTATAGCCATTTCGTACAGTTGATAGTTTTCTGGCAAATAATAGAATTACTTAATAGAATTTAA 93 18841213 0.98972878 38 87 760 0.943396226 1.397940009 0.377358491 0.129032258 0.235849057 93 3 3 100 X:18841157-18841373 7 Pvf1 FBtr0343604 18841137 18842901 GGTTGTG 7mer-m8 dme-miR-307a-3p X + 18841184 18841273 3'utr Pvf1 FlyBase G47336.1 CGATCCGGTCTGGTCTGATCTGGTCTGGTCTGGGGAACGGTTGTGCTCGTCCTTGGTTGGTTTGCGGTTGGTTCCTGGTGGTGGCTCCCT 31 18841225 0.740815313 17 28 241 0.895833333 1.33243846 0.5625 0.419354839 0.625 31 4 1 43 X:18841184-18841273 7 20 5698 FBgn0030964 2.333333333 0.133333333 0.206666667 8.571428571 150 96.77419355 9 -3 3 0.01 dme-miR-8-3p 7mer-A1 AGTATTA X 18841758 18841764 + X_18841758_18841764_+ 0.823349562 0.823349562 0.823349562 0 Pvf1 FBtr0343604 18841137 18842901 X + 18841716 18841788 3'utr Pvf1 FlyBase G62738.1 ACTTCTGTTTCTTTTGTGTTTCGTTTTAGATTAAAAATGTCGAGTATTATTCTTAGAGTCCACAAAAAAAAAA 17 18841753 0.988638716 6 17 164 1 1.278753601 0.105263158 0.117647059 0.210526316 17 0 0 19 X:18841716-18841788 7 Pvf1 FBtr0343604 18841137 18842901 AGTATTA 7mer-A1 dme-miR-8-3p X + 18841708 18841765 3'utr Pvf1 FlyBase G47338.1 ATGTTTTTACTTCTGTTTCTTTTGTGTTTCGTTTTAGATTAAAAATGTCGAGTATTAT 5 18841753 0.986884832 3 5 54 1 0.77815125 0 0.2 0.333333333 5 0 0 6 X:18841708-18841765 7 9.5 5699 FBgn0030964 2.333333333 0.133333333 0.206666667 4.071428571 71.25 45.96774194 5 5 5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 18841843 18841849 + X_18841843_18841849_+ 0.801970437 0.801970437 0.801970437 0 Pvf1 FBtr0343604|FBtr0343604|FBtr0343604 18841137|18841137|18841137 18842901|18842901|18842901 X + 18841821 18842004 3'utr Pvf1 FlyBase G62739.1 CGATTGCGAAACCTAAAACTCTTGTGATACTGTTCAATTAACTTTCTCGAAAAAAAGAACTAACCTTAAATTAGCATCTCTTGCTTAGCGATTGGTTAAGGATTGACAAATAAATGAAAAAAAAAAAACATTAAATAAATATATATAGCTGAGTTGAGGCAAAAATGGGAGAAGGGAGTTGCAT 727 18841842 0.859922651 31 689 4330 0.947488584 1.576655412 0.187214612 0.169188446 0.310502283 727 25 21 830 X:18841821-18842004 7 Pvf1 FBtr0343604|FBtr0343604|FBtr0343604 18841137|18841137|18841137 18842901|18842901|18842901 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X + 18841804 18841937 3'utr Pvf1 FlyBase G47339.1 CAACAAACAAATTTGTTCGATTGCGAAACCTAAAACTCTTGTGATACTGTTCAATTAACTTTCTCGAAAAAAAGAACTAACCTTAAATTAGCATCTCTTGCTTAGCGATTGGTTAAGGATTGACAAATAAATGA 243 18841842 0.987305181 24 210 1877 0.852941176 0.95724802 0.173529412 0.316872428 0.511764706 243 19 31 290 X:18841804-18841937 7 231.5 5700 FBgn0030964 2.333333333 0.133333333 0.206666667 99.21428571 1736.25 1120.16129 1 1 1 0.01 dme-miR-965-3p 6mer2-7 ACGCTT X 18842250 18842255 + X_18842250_18842255_+ 1 1 1 0 Pvf1 FBtr0343604 18841137 18842901 X + 18842219 18842274 3'utr Pvf1 FlyBase G62740.1 CGGCTGCACCCATCGATGTCTTGGATCGCAAACGCTTCATTGTCCAGGCGGTACAG 10 18842258 0.960072926 7 10 56 1 1.041392685 0.181818182 0.1 0.181818182 10 0 0 11 X:18842219-18842274 6 Pvf1 FBtr0343604 18841137 18842901 ACGCTT 6mer2-7 dme-miR-965-3p X + 18842222 18842278 3'utr Pvf1 FlyBase G47341.1 CTGCACCCATCGATGTCTTGGATCGCAAACGCTTCATTGTCCAGGCGGTACAGGTGG 8 18842258 0.980662148 4 7 49 0.928571429 0.812913357 0.142857143 0.375 0.642857143 8 0 1 13 X:18842222-18842278 6 7 5701 FBgn0030964 2.333333333 0.133333333 0.206666667 3 52.5 33.87096774 -8 -8 -8 0.01 dme-miR-932-5p 7mer-m8 GGAATTG X 18842396 18842402 + X_18842396_18842402_+ 0.70297287 0.70297287 0.70297287 0 Pvf1 FBtr0074640|FBtr0343604|FBtr0301667 18842309|18841137|18842309 18842901|18842901|18842901 X + 18842287 18842421 stop_codon Pvf1 FlyBase G62741.1 AACACCACCCTGTACAGTGTTTGAGGACAGTTGGTTCGCCACGGAGTACGAAGTAGAAACGCCAGCCTCCTAGCGGGGAATCCCCGAGTACTGAGAAGGCAATTGCCGGGGAATTGCACCGTGTACTTTATAATA 147 18842390 0.960377548 16 135 538 0.941520468 1.729704621 0.34502924 0.172413793 0.298245614 145 8 2 161 X:18842287-18842421 7 Pvf1 FBtr0074640|FBtr0343604|FBtr0301667 18842309|18841137|18842309 18842901|18842901|18842901 GGAATTG 7mer-m8 dme-miR-932-5p X + 18842345 18842413 3'utr Pvf1 FlyBase G47343.1 ACGCCAGCCTCCTAGCGGGGAATCCCCGAGTACTGAGAAGGCAATTGCCGGGGAATTGCACCGTGTACT 85 18842390 0.815611642 7 79 281 0.944 2.071882007 0.496 0.305882353 0.528 85 7 0 118 X:18842345-18842413 7 92 5702 FBgn0030964 2.333333333 0.133333333 0.206666667 39.42857143 690 445.1612903 6 6 6 0.01 dme-miR-8-3p 7mer-A1 AGTATTA X 18861866 18861872 - X_18861866_18861872_- 0.823349562 0.823349562 0.823349562 0 CG7326 FBtr0074653|FBtr0333159 18861558|18861195 18862233|18862233 X - 18861838 18861878 3'utr CG7326 FlyBase G68814.1 GCAACAAGTATTAGCTGGATAAACGACTTCTATATATATGT 5 18861868 0.963782656 3 4 25 1 0.84509804 0.571428571 0.4 0.571428571 5 0 0 7 X:18861838-18861878 7 CG7326 FBtr0074653|FBtr0333159 18861558|18861195 18862233|18862233 AGTATTA 7mer-A1 dme-miR-8-3p X - 18861832 18861883 3'utr CG7326 FlyBase G51764.1 GTTTTGCAACAAGTATTAGCTGGATAAACGACTTCTATATATATGTATGTAC 8 18861878 0.890229103 6 8 58 1 1.113943352 0.230769231 0.5 0.692307692 8 0 0 13 X:18861832-18861883 7 4.5 5703 FBgn0030970 277.82 13.14 20.1 0.016197538 0.342465753 0.223880597 -4 6 1 0.01 dme-miR-184-5p 6mer3-8 TGATAA X 18862097 18862102 - X_18862097_18862102_- 1 1 1 0 CG7326 FBtr0074653|FBtr0333159 18861558|18861195 18862233|18862233 X - 18862016 18862182 3'utr CG7326 FlyBase G68816.1 TTACTTGTTTTCACTATACAAAGACGGACTTGGCCCAATAATTTGTCAAAGATATTTTTTTTTTAAAGTTAGCCCTTGATTGATAATCAATTCCATCCAAAATACTTTACTATGCCTTTGATTCAAATCCTCACATCCTTTGCTTTTGTTTATCGTTATACATTCGC 675 18862092 0.984834822 23 661 5591 0.979028698 2.248953615 0.151214128 0.194074074 0.399558499 675 15 4 887 X:18862016-18862182 6 CG7326 FBtr0074653|FBtr0333159 18861558|18861195 18862233|18862233 TGATAA 6mer3-8 dme-miR-184-5p X - 18862067 18862118 3'utr CG7326 FlyBase G51766.1 AAAGTTAGCCCTTGATTGATAATCAATTCCATCCAAAATACTTTACTATGCC 366 18862092 0.814718855 6 362 2892 0.993650794 2.495544338 0.16031746 0.420765027 0.663492063 366 3 1 626 X:18862067-18862118 6 508.5 5704 FBgn0030970 277.82 13.14 20.1 1.830321791 38.69863014 25.29850746 -10 -10 -10 0.01 dme-miR-278-3p 6mer2-7 CCACCG X 18879258 18879263 + X_18879258_18879263_+ 1 1 1 0 CG34401 FBtr0112653|FBtr0333160 18878120|18878120 18880636|18884075 X + 18879199 18879279 3'utr CG34401 FlyBase G62780.1 GCTTTTGATGATGCTCCTCTGATCCGCCTCCACATCCGGAGCCAGTCCCCTCCCGAGAACCACCGCACTTAGTTCATGTTA 10 18879267 0.960824071 7 10 53 1 1 0.1 0 0 10 0 0 10 X:18879199-18879279 6 CG34401 FBtr0333160|FBtr0112653 18878120|18878120 18884075|18880636 CCACCG 6mer2-7 dme-miR-278-3p X + 18879243 18879319 3'utr CG34401 FlyBase G47364.1 GTCCCCTCCCGAGAACCACCGCACTTAGTTCATGTTAAACATAGTTCTTATTTGTATCTTCAGTTTTCGTTAGCCAT 10 18879267 0.986404951 5 9 80 0.916666667 1.041392685 0.333333333 0.1 0.25 10 1 0 11 X:18879243-18879319 6 7 5705 FBgn0085430 1429.756667 16.81 26.06 0.004895938 0.416418798 0.268610898 -9 -9 -9 0.01 dme-miR-14-3p 7mer-A1 AGACTGA X 18879407 18879413 + X_18879407_18879413_+ 0.823349562 0.823349562 0.823349562 0 CG34401 FBtr0112653|FBtr0333160 18878120|18878120 18880636|18884075 X + 18879390 18879431 3'utr CG34401 FlyBase G62782.1 GTGCGTGTGAGCATTTTAGACTGAGATATCTGCCAACAACAA 81 18879405 0.674951499 9 81 560 1 1.973127854 0.021276596 0.160493827 0.276595745 81 0 0 94 X:18879390-18879431 7 CG34401 FBtr0333160|FBtr0112653 18878120|18878120 18884075|18880636 AGACTGA 7mer-A1 dme-miR-14-3p X + 18879380 18879468 3'utr CG34401 FlyBase G47365.1 GTGTGTGTGTGTGCGTGTGAGCATTTTAGACTGAGATATCTGCCAACAACAACAAATACCGATGCCCACACACAGGCACACACCCACGC 39 18879405 0.977934613 11 37 251 0.965517241 1.447158031 0 0.384615385 0.586206897 39 1 1 56 X:18879380-18879468 7 57.5 5706 FBgn0085430 1429.756667 16.81 26.06 0.040216634 3.420582986 2.206446662 2 2 2 0.01 dme-miR-317-3p 8mer-A1 TGTGTTCA X 18879539 18879546 + X_18879539_18879546_+ 0.631136783 0.631136783 0.631136783 0 CG34401 FBtr0112653|FBtr0333160 18878120|18878120 18880636|18884075 X + 18879504 18879664 3'utr CG34401 FlyBase G62784.1 GGAAGTTGGAAAAGCTCTGTTTGATTTTTCAAAAATGTGTTCAGTTAAACTAACGTATTTATAGAGATGATCTATCAAATAGTTTTCTACACCGACAGCTATATGAAAAAGAACTCGGACTTTTACATATATGCTTACGATCCCTAGACCTAACTTTAAAT 53 18879539 0.874685887 18 47 447 0.887096774 1.263241435 0.048387097 0.150943396 0.274193548 53 5 2 55 X:18879504-18879664 8 CG34401 FBtr0333160|FBtr0112653 18878120|18878120 18884075|18880636 TGTGTTCA 8mer-A1 dme-miR-317-3p X + 18879506 18879579 3'utr CG34401 FlyBase G47366.1 AAGTTGGAAAAGCTCTGTTTGATTTTTCAAAAATGTGTTCAGTTAAACTAACGTATTTATAGAGATGATCTATC 25 18879539 0.830932442 9 22 227 0.923076923 1.556302501 0.025641026 0.4 0.615384615 25 3 0 36 X:18879506-18879579 8 21 5707 FBgn0085430 1429.756667 16.81 26.06 0.014687814 1.249256395 0.805832694 0 0 0 0.01 dme-bantam-3p 7mer-A1 GATCTCA X 18879923 18879929 + X_18879923_18879929_+ 0.823349562 0.823349562 0.823349562 0 CG34401 FBtr0112653|FBtr0333160 18878120|18878120 18880636|18884075 X + 18879912 18879938 3'utr CG34401 FlyBase G62786.1 AACTAGCAAACGATCTCAACTAAAGTA 20 18879915 0.872009704 2 18 61 0.925925926 1.397940009 0.222222222 0.2 0.407407407 20 2 0 25 X:18879912-18879938 7 CG34401 FBtr0333160|FBtr0112653 18878120|18878120 18884075|18880636 GATCTCA 7mer-A1 dme-bantam-3p X + 18879911 18879936 3'utr CG34401 FlyBase G47368.1 CAACTAGCAAACGATCTCAACTAAAG 9 18879915 0.815933272 2 8 26 0.928571429 1.113943352 0.071428571 0.555555556 0.714285714 9 1 0 13 X:18879911-18879936 7 14.5 5708 FBgn0085430 1429.756667 16.81 26.06 0.010141586 0.862581797 0.556408289 8 8 8 0.01 dme-miR-11-3p 8mer-m1 CTGTGATG X 18887517 18887524 + X_18887517_18887524_+ 0.462274223 0.462274223 0.462274223 0 CG7332 FBtr0342877|FBtr0074647 18887445|18887445 18888860|18887605 X + 18887481 18887547 3'utr CG7332 FlyBase G62800.1 AGGTGTGCCAGAATCGCATGGAACGGCATGGACATACTGTGATGGAGGAAACACTGATGTAAACAGA 46 18887515 0.957914001 7 40 190 0.884615385 1.361727836 0.403846154 0.130434783 0.230769231 46 5 1 46 X:18887481-18887547 8 CG7332 FBtr0342877|FBtr0074647 18887445|18887445 18888860|18887605 CTGTGATG 8mer-m1 dme-miR-11-3p X + 18887495 18887549 3'utr CG7332 FlyBase G47376.1 CGCATGGAACGGCATGGACATACTGTGATGGAGGAAACACTGATGTAAACAGAAG 34 18887511 0.765145744 5 29 136 0.890625 1.755874856 0.59375 0.558823529 0.765625 34 7 0 57 X:18887495-18887549 8 38 5709 FBgn0030973 1168.416667 41.72 64.31666667 0.032522645 0.910834132 0.590826639 2 6 4 0.01 dme-miR-278-3p 6mer2-7 CCACCG X 1891735 1891740 - X_1891735_1891740_- 1 1 1 0 arm FBtr0089990|FBtr0332583|FBtr0089992|FBtr0089988|FBtr0089991|FBtr0089989 1891399|1891399|1891399|1891399|1891399|1891399 1892098|1891829|1891829|1891829|1891829|1891829 X - 1891531 1891780 3'utr arm FlyBase G64125.1 TAAAACACACGAATTCCCATCCCTGCACAATAGCCCTCTTCCACCGGCTTTGATTCCATCCCGGATCCCGGAATCGCGATCACCGAAACTTGACTAGATCAACGAAGGTGTGGATTTTACTTGACAAATACGAGGAGCTGCGGCAGGTCAAAGTTCTGCTTCCAGAACTGAAGTCCGTGGGAGAAGGCTATTTGCTCACACACCATACCCCGCGACAAAGCATACACACACGCATACATGCATAATATTA 98 1891727 0.980621061 20 84 608 0.827586207 1.982271233 0.060344828 0.132653061 0.267241379 98 20 0 96 X:1891531-1891780 6 arm FBtr0089991|FBtr0089989|FBtr0089992|FBtr0089988|FBtr0089990|FBtr0332583 1891399|1891399|1891399|1891399|1891399|1891399 1891829|1891829|1891829|1891829|1892098|1891829 CCACCG 6mer2-7 dme-miR-278-3p X - 1891702 1891772 3'utr arm FlyBase G48335.1 ACGAATTCCCATCCCTGCACAATAGCCCTCTTCCACCGGCTTTGATTCCATCCCGGATCCCGGAATCGCGA 27 1891727 0.74588185 4 23 160 0.842105263 1.505149978 0.078947368 0.333333333 0.526315789 27 6 0 32 X:1891702-1891772 6 48 5710 FBgn0000117 5213.67 200.9433333 306.79 0.009206567 0.238873314 0.156458815 -13 -13 -13 0.01 dme-miR-1012-3p 6mer3-8 TTGACT X 1891898 1891903 - X_1891898_1891903_- 0.991483922 0.99309183 0.992287876 0.001136957 arm FBtr0089990 1891399 1892098 X - 1891787 1891924 stop_codon arm FlyBase G64126.1 TTGATGCCGGTGCATTGAACTTTGACTTGGACGCCATGCCGACGCCACCCAATGACAACAACAACCTGGCTGCCTGGTACGATACCGATTGTTAGACAAGCCGAGCTAAGGGTAAGGGTCGAGTATCCATTCGACCCC 54 1891903 0.879473949 15 51 278 0.936507937 1.293730757 0.19047619 0.166666667 0.285714286 54 2 2 59 X:1891787-1891924 6 arm FBtr0089990 1891399 1892098 TTGACT 6mer3-8 dme-miR-1012-3p X - 1891873 1891959 3'utr arm FlyBase G48336.2 TTCGCCCTATTCCATGGACATGGACGTTGGCGAGATTGATGCCGGTGCATTGAACTTTGACTTGGACGCCATGCCGACGCCACCCAA 27 1891903 0.970933498 7 23 156 0.916666667 1.217483944 0.166666667 0.307692308 0.5 26 2 1 33 X:1891873-1891959 6 23 5711 FBgn0000117 5213.67 200.9433333 306.79 0.00441148 0.11446013 0.074969849 0 0 0 0.01 dme-miR-263a-5p 6mer2-7 TGCCAT X 19025644 19025649 + X_19025644_19025649_+ 1 0.995236089 0.997618045 0.003368586 CG43759 FBtr0331156|FBtr0332994|FBtr0343982 19013347|19013347|19013347 19026872|19028629|19026872 X + 19025614 19025693 3'utr CG43759 FlyBase G62814.1 GGAATACAATACAAAGACTGCCTCATGCCATGCCATCCACTATTACCACCAACCCAACAGCGGCAGCAGCTATAGCAACT 26 19025644 0.964802389 7 24 114 0.878787879 1.462397998 0.060606061 0.192307692 0.363636364 26 4 0 29 X:19025614-19025693 6 CG43759 FBtr0343982|FBtr0332994|FBtr0331156 19013347|19013347|19013347 19026872|19028629|19026872 TGCCAT 6mer2-7 dme-miR-263a-5p X + 19025614 19025719 3'utr CG43759 FlyBase G47384.1 GGAATACAATACAAAGACTGCCTCATGCCATGCCATCCACTATTACCACCAACCCAACAGCGGCAGCAGCTATAGCAACTACAGTAGCCGTCGTCACCATCAGCAT 23 19025644 0.964634068 7 19 103 0.823529412 0.748188027 0.147058824 0.304347826 0.529411765 23 2 4 28 X:19025614-19025719 6 17 5712 FBgn0264090 9.64 0.236666667 0.363333333 1.763485477 71.83098592 46.78899083 0 0 0 0.01 dme-miR-184-5p 6mer3-8 TGATAA X 1903933 1903938 - X_1903933_1903938_- 1 1 1 0 Edem1 FBtr0305583|FBtr0070352|FBtr0332580 1903702|1903702|1903702 1904540|1904540|1904211 X - 1903906 1903957 3'utr Edem1 FlyBase G64153.1 TTAAAGCTCAGTTAAGATATGATAATAGAACTTCCAAAAATATGTATAGCTA 25 1903926 0.969242984 3 24 136 1 1.491361694 0.225806452 0.24 0.387096774 25 0 0 31 X:1903906-1903957 6 Edem1 FBtr0332580|FBtr0070352|FBtr0305583 1903702|1903702|1903702 1904211|1904540|1904540 TGATAA 6mer3-8 dme-miR-184-5p X - 1903871 1903937 3'utr Edem1 FlyBase G48360.1 GATAATAGAACTTCCAAAAATATGTATAGCTAAAGAACCTTAAGTGGTCCTACTTGTGCCGACAATT 19 1903926 0.850035005 6 19 120 1 1.431363764 0.222222222 0.315789474 0.518518519 19 0 0 27 X:1903871-1903937 5 18 5713 FBgn0023511 679.9133333 20.78 31.80666667 0.026473962 0.866217517 0.565919095 -12 -12 -12 0.01 dme-miR-283-5p 7mer-m8 TGATATT X 19136286 19136292 - X_19136286_19136292_- 0.620203677 0.620203677 0.620203677 0 RhoGAP18B FBtr0299623 19136105 19143584 X - 19136184 19136311 3'utr RhoGAP18B FlyBase G68832.1 TTACATCGTGTATAAGATGTGATATTCGCTGCAAATCGCAAAGCGTGAATATAATTTGTATTTATACCTATATTAATGAACCATATAAAATATACGAATAAAGTCCAATACAGTAGATAGGCTACACA 108 19136287 0.860845719 15 103 806 0.946153846 1.788875116 0.469230769 0.175925926 0.315384615 108 6 1 123 X:19136184-19136311 7 RhoGAP18B FBtr0299623 19136105 19143584 TGATATT 7mer-m8 dme-miR-283-5p X - 19136251 19136309 3'utr RhoGAP18B FlyBase G51775.2 ACATCGTGTATAAGATGTGATATTCGCTGCAAATCGCAAAGCGTGAATATAATTTGTAT 80 19136287 0.725032888 9 77 588 0.968992248 2.096910013 0.472868217 0.45 0.658914729 80 4 0 125 X:19136251-19136309 7 84.5 5714 FBgn0261461 2047.33 61.32666667 94.48 0.041273268 1.377867159 0.894369179 -5 -5 -5 0.01 dme-miR-34-5p 7mer-m8 CACTGCC X 19136353 19136359 - X_19136353_19136359_- 0.708953382 0.708953382 0.708953382 0 RhoGAP18B FBtr0299623 19136105 19143584 X - 19136337 19136380 3'utr RhoGAP18B FlyBase G68833.1 ACATTGTGGCGGTACAGTGAGCACTGCCTGCGGCCAACCTAAAA 27 19136352 0.818924862 4 27 112 1 1.505149978 0.4375 0.185185185 0.3125 27 0 0 32 X:19136337-19136380 7 RhoGAP18B FBtr0299623 19136105 19143584 CACTGCC 7mer-m8 dme-miR-34-5p X - 19136336 19136382 3'utr RhoGAP18B FlyBase G51776.1 AAACATTGTGGCGGTACAGTGAGCACTGCCTGCGGCCAACCTAAAAA 25 19136352 0.811062377 4 24 106 0.95 1.579783597 0.4 0.44 0.65 25 2 0 38 X:19136336-19136382 7 26 5715 FBgn0261461 2047.33 61.32666667 94.48 0.012699467 0.423959126 0.275190517 -7 -7 -7 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 19136463 19136468 - X_19136463_19136468_- 1 1 1 0 RhoGAP18B FBtr0299623 19136105 19143584 X - 19136412 19136509 3'utr RhoGAP18B FlyBase G68834.1 AAATGGGAATTCGCATAGACGAGCCCATCACGAAAATACTTACCAAAAAAGACAGTAGACTAAGTTTATACTAAAGATAATTAGGGGAAACCGCAAGA 289 19136469 0.957733101 11 257 1219 0.887537994 1.766412847 0.285714286 0.131487889 0.237082067 289 33 4 292 X:19136412-19136509 6 RhoGAP18B FBtr0299623 19136105 19143584 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X - 19136412 19136481 3'utr RhoGAP18B FlyBase G51777.1 CACGAAAATACTTACCAAAAAAGACAGTAGACTAAGTTTATACTAAAGATAATTAGGGGAAACCGCAAGA 199 19136469 0.952415018 9 167 757 0.833876221 1.806179974 0.231270358 0.40201005 0.61237785 199 48 3 256 X:19136412-19136481 6 223.5 5716 FBgn0261461 2047.33 61.32666667 94.48 0.109166573 3.644417872 2.365580017 1 1 1 0.01 dme-miR-79-3p 7mer-A1 AGCTTTA X 19136566 19136572 - X_19136566_19136572_- 0.823349562 0.823349562 0.823349562 0 RhoGAP18B FBtr0299623 19136105 19143584 X - 19136534 19136581 3'utr RhoGAP18B FlyBase G68835.1 TTTGTTGTCAGCTTTAAATGTACGTGTTTTATTGCTAATTTTAATGTT 9 19136568 0.984049746 7 9 92 1 1.230448921 0.058823529 0.444444444 0.705882353 9 0 0 17 X:19136534-19136581 7 RhoGAP18B FBtr0299623 19136105 19143584 AGCTTTA 7mer-A1 dme-miR-79-3p X - 19136533 19136579 3'utr RhoGAP18B FlyBase G51778.1 TGTTGTCAGCTTTAAATGTACGTGTTTTATTGCTAATTTTAATGTTC 7 19136575 0.995096408 5 5 64 0.636363636 0.84509804 0 0.285714286 0.545454545 7 4 0 7 X:19136533-19136579 7 6 5717 FBgn0261461 2047.33 61.32666667 94.48 0.002930646 0.097836721 0.063505504 -4 3 -0.5 0.01 dme-miR-184-5p 6mer3-8 TGATAA X 1915348 1915353 + X_1915348_1915353_+ 1 1 1 0 Rbcn-3B FBtr0070316|FBtr0344155 1915333|1915333 1916174|1916825 X + 1915328 1915382 stop_codon Rbcn-3B FlyBase G58116.1 TGTCTAAGGTGAAGGAGCAATGATAATGGACTAGTGAATCTTGCGGGATGTATAG 47 1915354 0.92109143 4 46 244 0.981132075 1.414973348 0.490566038 0.106382979 0.20754717 47 0 1 52 X:1915328-1915382 6 Rbcn-3B FBtr0344155|FBtr0070316 1915333|1915333 1916825|1916174 TGATAA 6mer3-8 dme-miR-184-5p X + 1915328 1915393 stop_codon Rbcn-3B FlyBase G43967.1 TGTCTAAGGTGAAGGAGCAATGATAATGGACTAGTGAATCTTGCGGGATGTATAGCATGTTATTAG 39 1915354 0.963868934 5 38 201 1 1.819543936 0.515151515 0.538461538 0.727272727 39 0 0 66 X:1915328-1915393 6 41.5 5718 FBgn0023510 935.05 16.80666667 25.86333333 0.044382653 2.469258231 1.60458822 -6 -6 -6 0.01 dme-miR-2535b-3p 7mer-m1 CGTGAGT X 1915556 1915562 + X_1915556_1915562_+ 0.765586663 0.765586663 0.765586663 0 Rbcn-3B FBtr0070316|FBtr0344155 1915333|1915333 1916174|1916825 X + 1915525 1915572 5'utr Rbcn-3B FlyBase G58117.1 GAAAATAAAAGTGCGGTAATGTATGGCGTTTCGTGAGTAGTTAAGGTA 10 1915547 0.939869701 6 9 73 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 X:1915525-1915572 7 Rbcn-3B FBtr0344155|FBtr0070316 1915333|1915333 1916825|1916174 CGTGAGT 7mer-m1 dme-miR-2535b-3p X + 1915535 1915572 5'utr Rbcn-3B FlyBase G43968.1 GTGCGGTAATGTATGGCGTTTCGTGAGTAGTTAAGGTA 5 1915546 0.763833871 4 4 39 1 1 0.1 0.6 0.8 5 0 0 10 X:1915535-1915572 7 6 5719 FBgn0023510 935.05 16.80666667 25.86333333 0.006416769 0.35700119 0.231988658 9 10 9.5 0.01 dme-miR-970-3p 6mer3-8 TCTTAT X 1915784 1915789 + X_1915784_1915789_+ 1 1 1 0 Rbcn-3B FBtr0070316|FBtr0344155 1915333|1915333 1916174|1916825 X + 1915740 1915901 5'utr Rbcn-3B FlyBase G58118.1 CGTATCTGTATGTATTTTAATGTATTACACGATTTTAATATGTCTCTTATTCGCCCCTCTGCGTTCTTTTTAATTTTTAGTGCCTAACTTTTACCCATACTCTTAGAACACGTATTTCTGTTTCTGTTTCTGTTTCTGTTTGTCGTTAATTTCCAATGCGGA 25 1915797 0.990431798 14 25 258 1 1.531478917 0.117647059 0.28 0.470588235 25 0 0 34 X:1915740-1915901 6 Rbcn-3B FBtr0344155|FBtr0070316 1915333|1915333 1916825|1916174 TCTTAT 6mer3-8 dme-miR-970-3p X + 1915786 1915809 5'utr Rbcn-3B FlyBase G43969.1 TTATTCGCCCCTCTGCGTTCTTTT 6 1915806 0.640503434 3 6 51 1 1.041392685 0 0.666666667 0.818181818 6 0 0 11 X:1915786-1915809 3 6 5720 FBgn0023510 935.05 16.80666667 25.86333333 0.006416769 0.35700119 0.231988658 -13 -22 -17.5 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT X 1916032 1916037 + X_1916032_1916037_+ 1 1 1 0 Rbcn-3B FBtr0070316|FBtr0344155 1915333|1915333 1916174|1916825 X + 1915965 1916080 5'utr Rbcn-3B FlyBase G58119.1 AAGCAAACACAACTACACGAGAAAAGCAAAGGAAATGAAAAACGAAAAAAAAAAACAAAGAATGAAAAGCTGTTATTATTATTACTCAACTATTATTATTACTATTGTATGCTACT 24 1916040 0.989185921 9 20 167 0.833333333 1.096910013 0 0.208333333 0.366666667 24 4 1 25 X:1915965-1916080 6 Rbcn-3B FBtr0344155|FBtr0070316 1915333|1915333 1916825|1916174 AGCTGT 6mer3-8 dme-miR-1008-3p X + 1916013 1916089 5'utr Rbcn-3B FlyBase G43970.1 AAAAAAACAAAGAATGAAAAGCTGTTATTATTATTACTCAACTATTATTATTACTATTGTATGCTACTATTATTATT 11 1916040 0.995025947 6 8 108 0.571428571 0.903089987 0.071428571 0.181818182 0.357142857 11 6 0 8 X:1916013-1916089 6 12 5721 FBgn0023510 935.05 16.80666667 25.86333333 0.012833538 0.71400238 0.463977317 -8 -8 -8 0.01 dme-miR-252-5p 6mer3-8 GTACTT X 19176929 19176934 - X_19176929_19176934_- 1 1 1 0 CG7556 FBtr0343313 19176107 19177281 X - 19176910 19176968 3'utr CG7556 FlyBase G68880.1 TGTCAGGGATAAAGCCATCGATGATAGATACGGTGTACTTCCAGGTTAGTAACTAATAA 6 19176932 0.985865214 4 6 44 1 0.77815125 0.333333333 0 0 6 0 0 6 X:19176910-19176968 6 CG7556 FBtr0343313 19176107 19177281 GTACTT 6mer3-8 dme-miR-252-5p X - 19176920 19176959 3'utr CG7556 FlyBase G51808.1 TAAAGCCATCGATGATAGATACGGTGTACTTCCAGGTTAG 7 19176938 0.789307022 3 5 42 0.8 0.602059991 0.4 0.285714286 0.5 7 1 1 8 X:19176920-19176959 6 5 5722 FBgn0030990 550.2733333 27.66666667 42.21666667 0.009086393 0.180722892 0.118436636 -2 4 1 0.01 dme-miR-1002-5p 7mer-m8 CTACTTA X 19181616 19181622 + X_19181616_19181622_+ 0.364923969 0.370264518 0.367594243 0.003776304 CG7453 FBtr0074666 19181192 19182024 X + 19181221 19181685 3'utr CG7453 FlyBase G62831.1 AAGGGCGGCCACTTCACCGGGTGCTCCAACGCCTCCTCCGGCGCACTCGGATGATTATTAGTTGTTTAAGTTATACACGACTGGACGTGCTTGCATTCAATGCAAGATCGCCGGATCGAAAGCAGAGTGAGAGTAGCGGAGAGCAGAGGAGGCGGTGGGAAAACGAAACGAAACTATGATATTGCTCAGTCAATTAGAGGAGGAGGAGAAAGGGATTCGCTTTGCAGCGTGGCTAGGATACCCTTCCGAGCGGCCAAATTGAATTTAAAGCCAACTGATTTTCAACACTAAATTCGAGTGGACTCTTAAGTTTAAGCATTTGGATTATTGTCAAGCATTTGTTAGCAATCAAAAATTGATACCGGCACTTATATGTACCCTATATATACATATATCTACTTAGGCTGCTGCTGTACATCGAAGGCTGCGGACTCTCAACCATCAACCATCAACATCAACATCAGC 372 19181619 0.977527574 68 357 2353 0.963218391 2.622214023 0.222988506 0.14516129 0.268965517 372 16 0 419 X:19181221-19181685 7 CG7453 FBtr0074666 19181192 19182024 CTACTTA 7mer-m8 dme-miR-1002-5p X + 19181225 19181670 3'utr CG7453 FlyBase G47396.1 GCGGCCACTTCACCGGGTGCTCCAACGCCTCCTCCGGCGCACTCGGATGATTATTAGTTGTTTAAGTTATACACGACTGGACGTGCTTGCATTCAATGCAAGATCGCCGGATCGAAAGCAGAGTGAGAGTAGCGGAGAGCAGAGGAGGCGGTGGGAAAACGAAACGAAACTATGATATTGCTCAGTCAATTAGAGGAGGAGGAGAAAGGGATTCGCTTTGCAGCGTGGCTAGGATACCCTTCCGAGCGGCCAAATTGAATTTAAAGCCAACTGATTTTCAACACTAAATTCGAGTGGACTCTTAAGTTTAAGCATTTGGATTATTGTCAAGCATTTGTTAGCAATCAAAAATTGATACCGGCACTTATATGTACCCTATATATACATATATCTACTTAGGCTGCTGCTGTACATCGAAGGCTGCGGACTCTCAACCATCAACCATC 247 19181620 0.978740321 64 228 1549 0.930294906 2.06320822 0.222520107 0.380566802 0.589812332 247 24 2 347 X:19181225-19181670 7 37 5723 FBgn0030991 1383.076667 90.74333333 138.8333333 0.026751952 0.407743452 0.266506603 -3 -4 -3.5 0.01 dme-miR-283-5p 7mer-m8 TGATATT X 19181765 19181771 + X_19181765_19181771_+ 0.620203677 0.620203664 0.620203671 0 CG7453 FBtr0074666 19181192 19182024 X + 19181706 19181846 3'utr CG7453 FlyBase G62832.1 GCATCCACAATCTAGCCGTAATGTGCCTTACGAACCAGCTCTATATACACCTTTACACATGATATTCTCCATCGCCGGGTCTTCGAGGTGATTTCTTCGCATTTACTTTACGCAACCAAGCAGCAGCACTCACTCAAAAAA 87 19181794 0.878989673 20 72 593 0.831858407 1.672097858 0.17699115 0.218390805 0.398230088 87 18 1 94 X:19181706-19181846 7 CG7453 FBtr0074666 19181192 19182024 TGATATT 7mer-m8 dme-miR-283-5p X + 19181714 19181814 3'utr CG7453 FlyBase G47397.1 AATCTAGCCGTAATGTGCCTTACGAACCAGCTCTATATACACCTTTACACATGATATTCTCCATCGCCGGGTCTTCGAGGTGATTTCTTCGCATTTACTTT 26 19181767 0.948156797 13 25 194 0.975 1.290034611 0.225 0.384615385 0.6 26 0 1 39 X:19181714-19181814 7 23 5724 FBgn0030991 1383.076667 90.74333333 138.8333333 0.016629592 0.253462146 0.165666267 -29 -2 -15.5 0.01 dme-miR-1006-3p 6mer2-7 GAATTT X 19195673 19195678 + X_19195673_19195678_+ 1 1 1 0 CG14194 FBtr0074671|FBtr0336701 19195450|19195450 19196037|19196037 X + 19195652 19195723 3'utr CG14194 FlyBase G62849.1 CGTAGCTTTTAGACTTGTACTGAATTTTAATTGTAAGACAAACGCTAACACCGCCCACGAACCATGTCCAAC 30 19195668 0.99173232 11 25 263 0.828571429 0.985276743 0.085714286 0.1 0.228571429 30 4 2 29 X:19195652-19195723 6 CG14194 FBtr0336701|FBtr0074671 19195450|19195450 19196037|19196037 GAATTT 6mer2-7 dme-miR-1006-3p X + 19195649 19195693 3'utr CG14194 FlyBase G47405.1 CGTCGTAGCTTTTAGACTTGTACTGAATTTTAATTGTAAGACAAA 11 19195668 0.740565461 8 9 95 0.785714286 1.041392685 0.071428571 0.272727273 0.428571429 11 3 0 11 X:19195649-19195693 6 17 5725 FBgn0030996 477.9966667 30.26333333 46.23333333 0.035565102 0.561735874 0.367700072 5 5 5 0.01 dme-miR-79-3p 7mer-m8 TAGCTTT X 1920072 1920078 + X_1920072_1920078_+ 0.620204031 0.620134552 0.620169291 4.91E-05 mip130 FBtr0070315 1919933 1920318 X + 1920016 1920097 3'utr mip130 FlyBase G58124.1 TCGTGAAAAGTTTTCAATAATACGCTGCAATAGGAAATTTAACAAAATAATCCGCATAGCTTTCTGACTGACTATCGTTTTT 16 1920077 0.899237691 7 14 119 1 1.255272505 0.222222222 0.125 0.222222222 16 0 0 18 X:1920016-1920097 7 mip130 FBtr0070315 1919933 1920318 TAGCTTT 7mer-m8 dme-miR-79-3p X + 1920069 1920095 3'utr mip130 FlyBase G43972.1 GCATAGCTTTCTGACTGACTATCGTTT 6 1920078 0.64624471 3 5 46 0.833333333 0.698970004 0 0 0 6 1 0 5 X:1920069-1920095 7 7 5726 FBgn0023509 646.0033333 22.50333333 34.39333333 0.010835857 0.311065027 0.203527815 -5 -6 -5.5 0.01 dme-miR-305-5p 6mer3-8 AGTACA X 19202190 19202195 - X_19202190_19202195_- 0.995372105 1 0.997686053 0.003272419 Ulp1 FBtr0074693 19202101 19202871 X - 19202191 19202224 3'utr Ulp1 FlyBase G68891.1 GTAAAGATTTTCTCTAACCCTTAGGAAGTAGTAC 12 19202212 0.680243243 3 10 92 0.875 1.146128036 0.0625 0.25 0.4375 12 2 0 14 X:19202191-19202224 4 Ulp1 FBtr0074693 19202101 19202871 AGTACA 6mer3-8 dme-miR-305-5p X - 19202187 19202221 3'utr Ulp1 FlyBase G51815.1 AAGATTTTCTCTAACCCTTAGGAAGTAGTACACCT 5 19202216 0.73467123 4 5 38 1 0.903089987 0.375 0.6 0.75 5 0 0 8 X:19202187-19202221 6 3 5727 FBgn0027603 2154.723333 47.38666667 72.81666667 0.00139229 0.063308948 0.041199359 17 21 19 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA X 19202822 19202827 - X_19202822_19202827_- 1 1 1 0 Ulp1 FBtr0074693|FBtr0074693 19202101|19202101 19202871|19202871 X - 19202810 19202887 stop_codon Ulp1 FlyBase G68896.1 AAAGTTGTGGCAGTAGGGGTTCAAGCACAAAACTACGCAAAAATGGAGAATTCAGTTCTTTACTTATTTTTACAAATC 12 19202837 0.966966306 7 12 74 1 1.113943352 0.076923077 0.083333333 0.153846154 12 0 0 13 X:19202810-19202887 6 Ulp1 FBtr0074693|FBtr0074693 19202101|19202101 19202871|19202871 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" X - 19202811 19202875 stop_codon Ulp1 FlyBase G51822.1 GTAGGGGTTCAAGCACAAAACTACGCAAAAATGGAGAATTCAGTTCTTTACTTATTTTTACAAAT 10 19202837 0.969586443 6 9 61 1 1.113943352 0.153846154 0.3 0.461538462 10 0 0 13 X:19202811-19202875 6 5.5 5728 FBgn0027603 2154.723333 47.38666667 72.81666667 0.002552532 0.116066404 0.075532158 10 10 10 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 19245030 19245036 + X_19245030_19245036_+ 0.823349562 0.823349562 0.823349562 0 CG7889 FBtr0074675 19244824 19245224 X + 19245016 19245051 3'utr CG7889 FlyBase G62859.1 TTTGTATCTAATTTCCAAAGAATTTGACTTAAGCAG 16 19245028 0.782570765 3 16 133 1 1.230448921 0.235294118 0.0625 0.117647059 16 0 0 17 X:19245016-19245051 7 CG7889 FBtr0074675 19244824 19245224 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X + 19245015 19245052 3'utr CG7889 FlyBase G47411.1 TTTTGTATCTAATTTCCAAAGAATTTGACTTAAGCAGT 11 19245028 0.781801197 3 11 116 1 1.146128036 0.428571429 0.181818182 0.357142857 11 0 0 14 X:19245015-19245052 7 13.5 5729 FBgn0031003 189 15.83 24.33666667 0.071428571 0.852811118 0.554718532 2 2 2 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA X 19252280 19252287 - X_19252280_19252287_- 0.500120318 0.500120318 0.500120318 0 rictor FBtr0074689|FBtr0343634|FBtr0343635 19252109|19252109|19252109 19252721|19252721|19252721 X - 19252263 19252312 3'utr rictor FlyBase G68918.1 AACCACCGCAATTTATTTAATTAATGTACTTAAAACTAAAAGAGACCCAG 42 19252288 0.978746993 2 41 298 0.980392157 1.397940009 0 0.19047619 0.333333333 42 0 1 50 X:19252263-19252312 8 rictor FBtr0343634|FBtr0343635|FBtr0074689 19252109|19252109|19252109 19252721|19252721|19252721 GTACTTAA 8mer-A1 dme-miR-252-5p X - 19252273 19252300 3'utr rictor FlyBase G51841.1 TTATTTAATTAATGTACTTAAAACTAAA 22 19252288 0.731338914 2 22 170 1 1.51851394 0 0.409090909 0.606060606 22 0 0 33 X:19252273-19252300 8 32 5730 FBgn0031006 604.1266667 11.03 16.89666667 0.052969024 2.901178604 1.893864668 1 1 1 0.01 dme-miR-34-5p 7mer-m8 CACTGCC X 19252673 19252679 - X_19252673_19252679_- 0.708953382 0.708953382 0.708953382 0 rictor FBtr0074689|FBtr0343634|FBtr0343635 19252109|19252109|19252109 19252721|19252721|19252721 X - 19252639 19252730 stop_codon rictor FlyBase G68921.1 AACTCCTAGACGCACTGGCGGAAGATCAATTGAAGTAGCCCAATGGGGACGCACTGCCTACTCTTACATCTCGTTTACTGGCCGCCCGCCTT 16 19252672 0.95481563 8 15 76 0.947368421 1.255272505 0.105263158 0.1875 0.315789474 16 1 0 18 X:19252639-19252730 7 rictor FBtr0343634|FBtr0343635|FBtr0074689 19252109|19252109|19252109 19252721|19252721|19252721 CACTGCC 7mer-m8 dme-miR-34-5p X - 19252636 19252688 3'utr rictor FlyBase G51844.1 ATGGGGACGCACTGCCTACTCTTACATCTCGTTTACTGGCCGCCCGCCTTCCT 7 19252670 0.966802684 7 7 36 1 0.84509804 0 0 0 7 0 0 7 X:19252636-19252688 7 6 5731 FBgn0031006 604.1266667 11.03 16.89666667 0.009931692 0.543970988 0.355099625 -7 -9 -8 0.01 dme-miR-184-3p 7mer-A1 CCGTCCA X 19266794 19266800 - X_19266794_19266800_- 0.823349562 0.823349562 0.823349562 0 CG8010 FBtr0074688 19266654 19266956 X - 19266739 19266904 3'utr CG8010 FlyBase G68959.1 AAGTGCAAGTTCCTAGCTGTGTTGCTTCACAATCAACAAACAAAATATCGTGTGGGCTCTCAAATGACTCCCACCACTGCGCTTCGTCGTCATTACGCGGACAACCGTCCACAGTGATTTTCCGCTAAAGAATAGGGCGTGCACAGCGCCGCATAGATAGACACGT 25 19266785 0.966227817 13 24 134 0.964285714 1.130333768 0.214285714 0.08 0.178571429 25 0 1 27 X:19266739-19266904 7 CG8010 FBtr0074688 19266654 19266956 CCGTCCA 7mer-A1 dme-miR-184-3p X - 19266739 19266838 3'utr CG8010 FlyBase G51870.2 ACTCCCACCACTGCGCTTCGTCGTCATTACGCGGACAACCGTCCACAGTGATTTTCCGCTAAAGAATAGGGCGTGCACAGCGCCGCATAGATAGACACGT 11 19266772 0.97514698 7 10 47 0.882352941 1.176091259 0.235294118 0.545454545 0.705882353 11 2 0 15 X:19266739-19266838 7 5.5 5732 FBgn0031008 256.69 19.43666667 29.99666667 0.021426624 0.282970331 0.183353706 -15 -28 -21.5 0.01 dme-miR-980-3p 7mer-A1 GCAGCTA X 19271799 19271805 + X_19271799_19271805_+ 0.823349562 0.823349562 0.823349562 0 Vav FBtr0074678|FBtr0333759|FBtr0113316|FBtr0074677 19271577|19271577|19271577|19271577 19273280|19272089|19272089|19272089 X + 19271770 19271830 3'utr Vav FlyBase G62875.1 CGATGTCGCCAGTCACAGCAACAACAATTGCAGCTAGATCGTAGCCTAGTTAAATGTATAC 213 19271797 0.827167595 5 209 843 0.98015873 2.392696953 0.130952381 0.145539906 0.277777778 213 5 0 247 X:19271770-19271830 7 Vav FBtr0113316|FBtr0074677|FBtr0074678|FBtr0333759 19271577|19271577|19271577|19271577 19272089|19272089|19273280|19272089 GCAGCTA 7mer-A1 dme-miR-980-3p X + 19271759 19271825 3'utr Vav FlyBase G47422.1 GAGGCCGTGGCCGATGTCGCCAGTCACAGCAACAACAATTGCAGCTAGATCGTAGCCTAGTTAAATG 138 19271797 0.932630892 3 135 504 0.982758621 2.357934847 0.163793103 0.463768116 0.681034483 138 4 0 228 X:19271759-19271825 7 174.5 5733 FBgn0040068 329.8133333 9.073333333 13.89 0.52908716 19.23218222 12.56299496 2 2 2 0.01 dme-miR-263a-5p 6mer3-8 GTGCCA X 19271941 19271946 + X_19271941_19271946_+ 0.999995688 0.999860655 0.999928171 9.55E-05 Vav FBtr0074678|FBtr0333759|FBtr0113316|FBtr0074677 19271577|19271577|19271577|19271577 19273280|19272089|19272089|19272089 X + 19271916 19271963 3'utr Vav FlyBase G62876.1 TTTGCGTCGTCTGCTCGAAACATTTGTGCCAATCACCGGAAAATTACA 6 19271939 0.957373768 5 6 33 1 0.954242509 0 0.5 0.666666667 6 0 0 9 X:19271916-19271963 6 Vav FBtr0113316|FBtr0074677|FBtr0074678|FBtr0333759 19271577|19271577|19271577|19271577 19272089|19272089|19273280|19272089 GTGCCA 6mer3-8 dme-miR-263a-5p X + 19271918 19271960 3'utr Vav FlyBase G47423.1 TGCGTCGTCTGCTCGAAACATTTGTGCCAATCACCGGAAAATT 5 19271948 0.956761419 3 5 30 1 0.84509804 0 0.2 0.428571429 5 0 0 7 X:19271918-19271960 6 5.5 5734 FBgn0040068 329.8133333 9.073333333 13.89 0.0166761 0.606171932 0.395968323 2 -7 -2.5 0.01 dme-miR-968-5p 6mer3-8 ACTACT X 1927210 1927215 + X_1927210_1927215_+ 1 1 1 0 Ocrl FBtr0070317|FBtr0332586 1927165|1927165 1927524|1927524 X + 1927174 1927230 3'utr Ocrl FlyBase G58135.1 AGCTGTGCCGCCGAATCGGAAGCGAGCGATAGATGTACTACTCTGTTGATAGTTACG 214 1927207 0.963160867 5 213 1448 0.996015936 2.397940009 0.3187251 0.135514019 0.262948207 214 1 0 250 X:1927174-1927230 6 Ocrl FBtr0070317|FBtr0332586 1927165|1927165 1927524|1927524 ACTACT 6mer3-8 dme-miR-968-5p X + 1927181 1927232 3'utr Ocrl FlyBase G43977.1 CCGCCGAATCGGAAGCGAGCGATAGATGTACTACTCTGTTGATAGTTACGCA 153 1927207 0.810788619 5 151 970 0.996047431 2.100370545 0.343873518 0.490196078 0.691699605 153 0 1 252 X:1927181-1927232 6 182.5 5735 FBgn0023508 754.4366667 24.83 38.10666667 0.241902347 7.349979863 4.789188244 3 3 3 0.01 dme-miR-252-5p 6mer3-8 GTACTT X 19272255 19272260 + X_19272255_19272260_+ 1 0.999998905 0.999999453 7.78E-07 Vav FBtr0074678 19271577 19273280 X + 19272250 19272310 3'utr Vav FlyBase G62877.1 TTATTGTACTTGTACTGGTAGATATTTAACCCTAGTTGAAACGCAAATGTTAACATAACGA 10 19272259 0.995386593 6 7 95 0.538461538 0.84509804 0.076923077 0.1 0.307692308 10 6 0 7 X:19272250-19272310 6 Vav FBtr0074678 19271577 19273280 GTACTT 6mer3-8 dme-miR-252-5p X + 19272252 19272287 3'utr Vav FlyBase G47424.1 ATTGTACTTGTACTGGTAGATATTTAACCCTAGTTG 5 19272261 0.958274403 4 5 52 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 X:19272252-19272287 6 5.5 5736 FBgn0040068 329.8133333 9.073333333 13.89 0.0166761 0.606171932 0.395968323 -4 -6 -5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 19272508 19272513 + X_19272508_19272513_+ 1 1 1 0 Vav FBtr0074678 19271577 19273280 X + 19272451 19272563 3'utr Vav FlyBase G62879.1 TATAGATATCTATACCTATAACTATAACTATACCTAATAACTATAACTAACTATAATGTACCTATTTATATAGCCAACGAATCACCTTGCGAACTTGATGGATGATGAGTCGA 14 19272507 0.982620591 8 14 105 1 1.204119983 0.125 0.142857143 0.25 14 0 0 16 X:19272451-19272563 6 Vav FBtr0074678 19271577 19273280 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X + 19272482 19272524 3'utr Vav FlyBase G47425.1 ACCTAATAACTATAACTAACTATAATGTACCTATTTATATAGC 5 19272507 0.984288311 2 5 51 1 0.698970004 0 0 0 5 0 0 5 X:19272482-19272524 6 6 5737 FBgn0040068 329.8133333 9.073333333 13.89 0.018192109 0.661278472 0.431965443 1 1 1 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT X 19273140 19273146 + X_19273140_19273146_+ 0.658999527 0.658999527 0.658999527 0 Vav FBtr0074678 19271577 19273280 X + 19273108 19273165 3'utr Vav FlyBase G62880.1 CGCTCGCCTGCTGTCCCTTTCCCTTTCGCATCGGCAGCTCCAAAATTATTGTTAAGTA 15 19273138 0.892096526 5 14 132 0.933333333 1.146128036 0 0 0 15 1 0 14 X:19273108-19273165 7 Vav FBtr0074678 19271577 19273280 GGCAGCT 7mer-m8 dme-miR-980-3p X + 19273117 19273164 3'utr Vav FlyBase G47426.1 GCTGTCCCTTTCCCTTTCGCATCGGCAGCTCCAAAATTATTGTTAAGT 13 19273137 0.795250234 8 12 102 0.952380952 1.301029996 0 0.307692308 0.571428571 13 1 0 20 X:19273117-19273164 7 12.5 5738 FBgn0040068 329.8133333 9.073333333 13.89 0.037900226 1.377663483 0.899928006 2 3 2.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 19281978 19281983 - X_19281978_19281983_- 1 1 1 0 CG8034 FBtr0074684 19281230 19282726 X - 19281954 19282081 3'utr CG8034 FlyBase G68977.1 AATCACTACTTATAGAAATACTGATATCTGCATCTGAAGATACATCGATGTGACAGGAAGATGAGGAAGGAGTGTTGAAAATTGATCGGCTTTAAAATGTACCTAAGGAGCGAAGTTAAGCAGCGACA 615 19281984 0.833484641 21 601 3561 0.981767181 2.544068044 0.227208976 0.133333333 0.252454418 615 12 1 700 X:19281954-19282081 6 CG8034 FBtr0074684 19281230 19282726 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X - 19281941 19282077 3'utr CG8034 FlyBase G51880.1 ACTACTTATAGAAATACTGATATCTGCATCTGAAGATACATCGATGTGACAGGAAGATGAGGAAGGAGTGTTGAAAATTGATCGGCTTTAAAATGTACCTAAGGAGCGAAGTTAAGCAGCGACAAAACAATTAAACT 363 19281984 0.980909013 18 350 2028 0.965048544 2.219235134 0.203883495 0.339779006 0.53592233 362 16 2 497 X:19281941-19282077 6 437.5 5739 FBgn0031011 3073.103333 84.54333333 130.1433333 0.142364233 5.174861018 3.36167815 1 1 1 0.01 dme-miR-1006-3p 6mer3-8 CGAATT X 19301540 19301545 - X_19301540_19301545_- 1 1 1 0 CG8051 FBtr0074683|FBtr0343320 19301328|19301328 19301580|19301580 X - 19301498 19301563 3'utr CG8051 FlyBase G68997.1 AGTTTTACTCAGTGCCAGCGAATTCCAGGACCAACACCGTTCCCCCATCCATCCTAACTTTAGCAA 40 19301541 0.783721069 7 32 156 0.860465116 1.091080469 0.11627907 0.075 0.139534884 40 4 2 37 X:19301498-19301563 6 CG8051 FBtr0074683|FBtr0343320 19301328|19301328 19301580|19301580 CGAATT 6mer3-8 dme-miR-1006-3p X - 19301506 19301553 3'utr CG8051 FlyBase G51891.1 AGTGCCAGCGAATTCCAGGACCAACACCGTTCCCCCATCCATCCTAAC 15 19301541 0.800323328 3 13 41 0.96 1.380211242 0.28 0.6 0.76 15 1 0 24 X:19301506-19301553 6 13.5 5740 FBgn0031012 506.02 23.91 36.60666667 0.026678787 0.564617315 0.368785285 -4 -4 -4 0.01 dme-miR-14-3p 7mer-A1 AGACTGA X 19485920 19485926 - X_19485920_19485926_- 0.823349562 0.823349562 0.823349562 0 pcm FBtr0302082|FBtr0074784 19485757|19485878 19486102|19486102 X - 19485901 19485952 3'utr pcm FlyBase G69024.1 TTGCGGATTATGTGAATACTAAAATGAGACTGACTCGTCTTTATATTTTTTC 220 19485928 0.932390553 8 214 1370 0.98467433 2.409933123 0.340996169 0.154545455 0.287356322 220 4 0 257 X:19485901-19485952 7 pcm FBtr0302082|FBtr0074784 19485757|19485878 19486102|19486102 AGACTGA 7mer-A1 dme-miR-14-3p X - 19485880 19485960 3'utr pcm FlyBase G51910.1 TTTTAGAGTTGCGGATTATGTGAATACTAAAATGAGACTGACTCGTCTTTATATTTTTTCAATAAACTGGACTTTACCCAT 122 19485928 0.922353502 11 118 715 0.963190184 2.195899652 0.306748466 0.303278689 0.478527607 122 6 0 157 X:19485880-19485960 7 154.5 5741 FBgn0020261 395.3566667 9.006666667 13.76666667 0.390786379 17.15396003 11.22276029 2 2 2 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC X 19486004 19486009 - X_19486004_19486009_- 1 1 1 0 pcm FBtr0302082|FBtr0074784 19485757|19485878 19486102|19486102 X - 19485969 19486086 3'utr pcm FlyBase G69025.1 ATTTTTAGGTTCAAATCCCACCTAGCTGAAGAAATGCAACGCTATTTGGATCTTATATCACCTTATTTCTATCTCTCCTAGTCTGTGCGAGGCACTAGAATTGCCGCACACGATAGAT 55 19486003 0.910986667 10 52 401 0.939393939 1.491361694 0.060606061 0.145454545 0.287878788 55 3 1 62 X:19485969-19486086 6 pcm FBtr0302082|FBtr0074784 19485757|19485878 19486102|19486102 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" X - 19485978 19486027 3'utr pcm FlyBase G51911.1 ACCTTATTTCTATCTCTCCTAGTCTGTGCGAGGCACTAGAATTGCCGCAC 32 19486003 0.971965484 6 31 250 1 1.681241237 0 0.40625 0.604166667 32 0 0 48 X:19485978-19486027 6 37 5742 FBgn0020261 395.3566667 9.006666667 13.76666667 0.093586382 4.108068098 2.687651332 -6 -6 -6 0.01 dme-miR-980-3p 6mer3-8 GGCAGC X 19493374 19493379 - X_19493374_19493379_- 1 1 1 0 CG12204 FBtr0074783 19493290 19493407 X - 19493341 19493393 3'utr CG12204 FlyBase G69031.1 GTGCCGCTTCCATTGGCAGCGAAACTGGTGGCCATTACATGGTGCTGTGGTCA 7 19493380 0.967141724 4 7 42 1 0.954242509 0.666666667 0.285714286 0.444444444 7 0 0 9 X:19493341-19493393 6 CG12204 FBtr0074783 19493290 19493407 GGCAGC 6mer3-8 dme-miR-980-3p X - 19493357 19493401 3'utr CG12204 FlyBase G51915.2 ATGTGATGGTGCCGCTTCCATTGGCAGCGAAACTGGTGGCCATTA 8 19493381 0.810611491 2 7 39 0.9375 0.875061263 0.5625 0.375 0.6875 8 0 1 15 X:19493357-19493401 6 6 5743 FBgn0031022 64 7.23 11.12666667 0.09375 0.829875519 0.539245057 1 2 1.5 0.01 dme-miR-308-3p 7mer-m1 TGTGATT X 19508833 19508839 + X_19508833_19508839_+ 0.521223855 0.521223855 0.521223855 0 Pfrx FBtr0074713|FBtr0074717|FBtr0074715|FBtr0307193|FBtr0074716|FBtr0074714|FBtr0074720|FBtr0307194|FBtr0339439|FBtr0339440|FBtr0074718|FBtr0307192|FBtr0074719 19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526 19509350|19509350|19509350|19509350|19508902|19509350|19509350|19509350|19509350|19509350|19509350|19509350|19509350 X + 19508723 19508869 3'utr Pfrx FlyBase G62900.1 AGACACGGACGTGGTCATGCGAGGGCAACACTGACAACTGCTCCTGCACCTGCTCCAAGGATGTGGTGGCATCTCTACTTAACGTGGCGTCGAAGGACTGCGTATGAAATTGTGATTGATCCATTGTGCTGTTTTATTATGTACTTT 182 19508832 0.988207279 16 177 1612 0.964912281 1.643452676 0.057017544 0.203296703 0.364035088 182 4 4 220 X:19508723-19508869 7 Pfrx FBtr0074714|FBtr0074716|FBtr0074719|FBtr0339440|FBtr0307194|FBtr0074718|FBtr0339439|FBtr0307192|FBtr0074720|FBtr0074713|FBtr0074717|FBtr0074715|FBtr0307193 19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526 19509350|19508902|19509350|19509350|19509350|19509350|19509350|19509350|19509350|19509350|19509350|19509350|19509350 TGTGATT 7mer-m1 dme-miR-308-3p X + 19508773 19508873 3'utr Pfrx FlyBase G47437.1 TGCTCCAAGGATGTGGTGGCATCTCTACTTAACGTGGCGTCGAAGGACTGCGTATGAAATTGTGATTGATCCATTGTGCTGTTTTATTATGTACTTTAATG 122 19508832 0.965571548 18 117 1095 0.957894737 1.561101384 0.068421053 0.409836066 0.621052632 122 4 4 182 X:19508773-19508873 7 125.5 5744 FBgn0027621 67 2.486666667 3.756666667 1.873134328 50.4691689 33.40727595 1 1 1 0.01 dme-miR-304-5p 6mer2-7 GAGATT X 19524416 19524421 + X_19524416_19524421_+ 1 1 1 0 CoRest FBtr0336667 19524177 19524813 X + 19524405 19524452 3'utr CoRest FlyBase G62924.1 CGCATCACAAAGAGATTGTAGACTACATTTATTAGGGCTAGTATAACG 6 19524423 0.983760677 3 6 50 1 0.84509804 0.428571429 0.166666667 0.285714286 6 0 0 7 X:19524405-19524452 6 CoRest FBtr0336667 19524177 19524813 GAGATT 6mer2-7 dme-miR-304-5p X + 19524405 19524435 3'utr CoRest FlyBase G47458.1 CGCATCACAAAGAGATTGTAGACTACATTTA 7 19524421 0.735891592 3 7 40 1 1.041392685 0 0.428571429 0.636363636 7 0 0 11 X:19524405-19524435 6 6 5745 FBgn0261573 1764.736667 66.82333333 102.5833333 0.003399941 0.089788996 0.058489033 -7 -5 -6 0.01 dme-miR-304-5p 7mer-A1 GAGATTA X 19529975 19529981 + X_19529975_19529981_+ 0.823349562 0.823349562 0.823349562 0 CoRest FBtr0302864|FBtr0307903|FBtr0302862|FBtr0302863 19529756|19529756|19529756|19529756 19530896|19530896|19530896|19530896 X + 19529941 19530015 3'utr CoRest FlyBase G62931.1 AAAAGAAAGCATCACGGCTTTATCTAGGCTTGTAGAGATTAGTTCGTTTGTATTTGAGGTAACCTTGAGACAGTT 14 19529971 0.987418659 7 14 123 1 1.204119983 0.1875 0.142857143 0.25 14 0 0 16 X:19529941-19530015 7 CoRest FBtr0302862|FBtr0302863|FBtr0302864|FBtr0307903 19529756|19529756|19529756|19529756 19530896|19530896|19530896|19530896 GAGATTA 7mer-A1 dme-miR-304-5p X + 19529900 19530016 3'utr CoRest FlyBase G47462.1 TTCTCTTAATTGTCTTTAAACTTGGGACGCATTTATCGTAAAAAAGAAAGCATCACGGCTTTATCTAGGCTTGTAGAGATTAGTTCGTTTGTATTTGAGGTAACCTTGAGACAGTTC 21 19529971 0.986639322 12 20 173 0.941176471 1.505149978 0.117647059 0.428571429 0.647058824 21 2 0 32 X:19529900-19530016 7 10 5746 FBgn0261573 1764.736667 66.82333333 102.5833333 0.005666568 0.149648326 0.097481722 4 4 4 0.01 dme-miR-318-3p 6mer2-7 CCAGTG X 19561263 19561268 - X_19561263_19561268_- 1 1 1 0 Grip84 FBtr0343590 19559429 19561576 X - 19561250 19561272 3'utr Grip84 FlyBase G69050.1 TAAGCCAGTGGCGTAGATTGCAG 156 19561264 0.915576815 4 154 625 0.986547085 2.342422681 0 0.307692308 0.515695067 156 3 0 220 X:19561250-19561272 6 Grip84 FBtr0343590 19559429 19561576 CCAGTG 6mer2-7 dme-miR-318-3p X - 19561251 19561272 3'utr Grip84 FlyBase G51929.1 TAAGCCAGTGGCGTAGATTGCA 111 19561264 0.902518473 4 106 448 0.967948718 1.701855693 0 0.324324324 0.519230769 111 3 2 151 X:19561251-19561272 6 133.5 5747 FBgn0026430 457.6666667 17.04666667 26.22666667 0.291697014 7.831443097 5.090238943 -4 -4 -4 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA X 19569273 19569278 + X_19569273_19569278_+ 1 1 1 0 car FBtr0074728|FBtr0074727|FBtr0331158 19568316|19568316|19568382 19569401|19569401|19569401 X + 19569260 19569316 3'utr car FlyBase G62951.1 TTCTCATCCTTATGTGCAAGACCTAAATGTATCTCAAAGTGAACATTTCAATGGTGT 161 19569287 0.766981241 3 160 873 0.995098039 2.307496038 0.534313725 0.236024845 0.397058824 161 1 0 203 X:19569260-19569316 6 car FBtr0074727|FBtr0331158|FBtr0074728 19568316|19568382|19568316 19569401|19569401|19569401 GTGCAA 6mer3-8 dme-miR-92b-3p X + 19569265 19569315 3'utr car FlyBase G47480.2 ATCCTTATGTGCAAGACCTAAATGTATCTCAAAGTGAACATTTCAATGGTG 117 19569287 0.782476966 2 114 654 0.978947368 2.269512944 0.531578947 0.444444444 0.657894737 117 4 0 186 X:19569265-19569315 6 132 5748 FBgn0000257 199.6666667 7.876666667 12.11 0.661101836 16.75835802 10.90008258 -14 -14 -14 0.01 dme-miR-33-5p 7mer-A1 AATGCAA X 19570430 19570436 - X_19570430_19570436_- 0.782483663 0.782911824 0.782697743 0.000302712 Tao FBtr0303999 19569719 19571580 X - 19570403 19570482 3'utr Tao FlyBase G69056.1 ATATATATATACATAAAACTAAAGTAAGCCTATTTTAGAGTTAATTAATGCAAATTGCAAAATGCTTAGTCAAAACAATA 16 19570419 0.796402031 7 15 101 1 1.204119983 0 0.066666667 0.125 15 0 0 16 X:19570403-19570482 7 Tao FBtr0303999 19569719 19571580 AATGCAA 7mer-A1 dme-miR-33-5p X - 19570388 19570431 3'utr Tao FlyBase G51933.1 AAATTGCAAAATGCTTAGTCAAAACAATAAAAATTGTATAGAAA 9 19570419 0.970550671 5 7 41 1 1.041392685 0.181818182 0.222222222 0.363636364 9 0 0 11 X:19570388-19570431 2 5 5749 FBgn0031030 4262.23 160.5366667 246.0233333 0.001173095 0.031145533 0.020323276 -17 -17 -17 0.01 dme-miR-283-5p 8mer-A1 TGATATTA X 19570999 19571006 - X_19570999_19571006_- 0.592192292 0.592192292 0.592192292 0 Tao FBtr0304000|FBtr0303999 19570645|19569719 19571580|19571580 X - 19570967 19571018 5'utr Tao FlyBase G69059.1 TAAAGTCTAATTTGATATTATTACCGGATAACTGAATCAATCACACAATTTT 8 19571007 0.995075438 3 6 73 0.8 0.903089987 0.4 0.25 0.4 8 2 0 8 X:19570967-19571018 8 Tao FBtr0304000|FBtr0303999 19570645|19569719 19571580|19571580 TGATATTA 8mer-A1 dme-miR-283-5p X - 19570974 19571030 5'utr Tao FlyBase G51935.1 AAGTGTTTAAATTAAAGTCTAATTTGATATTATTACCGGATAACTGAATCAATCACA 8 19571007 0.983233516 4 7 72 1 1.146128036 0.142857143 0.625 0.785714286 8 0 0 14 X:19570974-19571030 8 6.5 5750 FBgn0031030 4262.23 160.5366667 246.0233333 0.001525023 0.040489193 0.026420258 1 1 1 0.01 dme-miR-968-5p 6mer3-8 ACTACT X 19611095 19611100 + X_19611095_19611100_+ 1 1 1 0 CG14207 FBtr0074734|FBtr0074733|FBtr0345918|FBtr0307161 19610889|19610889|19610889|19610889 19611273|19611273|19611413|19611153 X + 19611029 19611114 3'utr CG14207 FlyBase G62960.1 ATCCAATCCTATCTAAATGATTAATTTTTTTGGTTCTGACTTAAAGCTAAACTATGTTACTGACGTACTACTCATTAACTTAAATA 26 19611103 0.98949862 11 24 231 0.96875 1.491361694 0.03125 0.192307692 0.34375 26 1 0 31 X:19611029-19611114 6 CG14207 FBtr0307161|FBtr0345918|FBtr0074733|FBtr0074734 19610889|19610889|19610889|19610889 19611153|19611413|19611273|19611273 ACTACT 6mer3-8 dme-miR-968-5p X + 19611051 19611117 3'utr CG14207 FlyBase G47489.1 AATTTTTTTGGTTCTGACTTAAAGCTAAACTATGTTACTGACGTACTACTCATTAACTTAAATATAA 23 19611103 0.705016255 11 22 201 0.9375 1.477121255 0.125 0.347826087 0.53125 23 2 0 30 X:19611051-19611117 6 11 5751 FBgn0031037 798 79.94333333 122.5933333 0.013784461 0.137597465 0.089727555 -8 -8 -8 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG X 19615481 19615486 + X_19615481_19615486_+ 1 1 1 0 Shawn FBtr0074739|FBtr0344069|FBtr0074738|FBtr0074737 19615415|19615415|19615415|19615415 19615617|19615617|19615596|19615617 X + 19615419 19615512 3'utr Shawn FlyBase G62963.1 GCGCTCCCAATGCGGTGACCACAGCATGTCGACGTGAATCTTTGTACATATGTAGATTAATGCCAAAGTTGCCAGGAAATCGGTGGGCAGGTGG 18 19615479 0.969877113 6 16 96 0.947368421 1.255272505 0.473684211 0.055555556 0.105263158 18 1 0 18 X:19615419-19615512 6 Shawn FBtr0074737|FBtr0074738|FBtr0344069|FBtr0074739 19615415|19615415|19615415|19615415 19615617|19615596|19615617|19615617 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" X + 19615462 19615501 3'utr Shawn FlyBase G47491.1 GTACATATGTAGATTAATGCCAAAGTTGCCAGGAAATCGG 11 19615479 0.721593854 5 9 59 0.866666667 1.113943352 0.466666667 0.363636364 0.533333333 11 2 0 13 X:19615462-19615501 6 12.5 5752 FBgn0031039 175.68 13.25333333 20.26333333 0.071152095 0.943158954 0.616877776 2 2 2 0.01 dme-bantam-3p 6mer3-8 TGATCT X 19622026 19622031 - X_19622026_19622031_- 1 0.991881458 0.995940729 0.005740646 NAA20 FBtr0332483|FBtr0332484|FBtr0074763 19621449|19621449|19621449 19622172|19622172|19622172 X - 19622011 19622047 5'utr NAA20 FlyBase G69082.1 ATAACCCATAATCCCGTGATCTGCCCGGTGATAACAT 32 19622027 0.718237669 4 32 165 1 1.579783597 0 0.125 0.263157895 32 0 0 38 X:19622011-19622047 6 NAA20 FBtr0074763|FBtr0332484|FBtr0332483 19621449|19621449|19621449 19622172|19622172|19622172 TGATCT 6mer3-8 dme-bantam-3p X - 19622012 19622047 5'utr NAA20 FlyBase G51951.1 ATAACCCATAATCCCGTGATCTGCCCGGTGATAACA 21 19622026 0.765807665 4 20 93 1 1.556302501 0 0.523809524 0.722222222 21 0 0 36 X:19622012-19622047 6 25.5 5753 FBgn0031043 449.0266667 46.18333333 70.71 0.0567895 0.552147239 0.360627917 -4 -5 -4.5 0.01 dme-miR-282-5p 6mer2-7 GAGGCT X 19624741 19624746 + X_19624741_19624746_+ 1 1 1 0 MKP-4 FBtr0332481|FBtr0074741 19624630|19624630 19625199|19625729 X + 19624662 19624768 3'utr MKP-4 FlyBase G62969.1 CATCATCAGAGACGGGACAATTGGACTCCCTTGTCGGCTGGCAAAGAACGGCAATCGCCCACCTAAACAAAAAGCAATGGAGGCTTGGATTGATTGATCAGTGCTTA 56 19624739 0.968725741 9 54 238 0.956521739 1.819543936 0.304347826 0.178571429 0.333333333 56 3 0 66 X:19624662-19624768 6 MKP-4 FBtr0074741|FBtr0332481 19624630|19624630 19625729|19625199 GAGGCT 6mer2-7 dme-miR-282-5p X + 19624722 19624778 3'utr MKP-4 FlyBase G47498.1 ACCTAAACAAAAAGCAATGGAGGCTTGGATTGATTGATCAGTGCTTATCAGTGCTGG 20 19624739 0.968289595 6 19 102 0.911764706 1.491361694 0.264705882 0.5 0.705882353 20 3 0 31 X:19624722-19624778 6 30 5754 FBgn0031044 267.6933333 13.86333333 21.32666667 0.112068536 2.163981726 1.40668959 2 2 2 0.01 dme-miR-304-5p 7mer-m8 TGAGATT X 19624917 19624923 + X_19624917_19624923_+ 0.620203442 0.620203442 0.620203442 0 MKP-4 FBtr0332481|FBtr0074741 19624630|19624630 19625199|19625729 X + 19624894 19624932 3'utr MKP-4 FlyBase G62970.1 GCTGAATAGCTCCTCCACCAAGCTGAGATTTTTGAAACG 30 19624924 0.62401992 7 27 227 0.878787879 1.161368002 0.393939394 0.1 0.181818182 30 3 1 29 X:19624894-19624932 7 MKP-4 FBtr0074741|FBtr0332481 19624630|19624630 19625729|19625199 TGAGATT 7mer-m8 dme-miR-304-5p X + 19624884 19624933 3'utr MKP-4 FlyBase G47499.1 TGGTCCCATTGCTGAATAGCTCCTCCACCAAGCTGAGATTTTTGAAACGC 18 19624923 0.987950716 6 14 130 0.846153846 1.041392685 0.269230769 0.222222222 0.461538462 18 3 1 22 X:19624884-19624933 7 23.5 5755 FBgn0031044 267.6933333 13.86333333 21.32666667 0.08778702 1.695119019 1.101906846 -7 -6 -6.5 0.01 dme-bantam-3p 6mer3-8 TGATCT X 19625328 19625333 + X_19625328_19625333_+ 1 1 1 0 MKP-4 FBtr0074741 19624630 19625729 X + 19625273 19625361 3'utr MKP-4 FlyBase G62972.1 TGTACGTGCGATATAGTGCACCCATATTTGTTGGAAGCCATACAAGTATGTATATTGATCTTTGCTGTTCCATATGCATTTGCATAGCT 19 19625327 0.992817071 9 17 194 0.84 1.322219295 0.16 0.210526316 0.4 19 4 0 21 X:19625273-19625361 6 MKP-4 FBtr0074741 19624630 19625729 TGATCT 6mer3-8 dme-bantam-3p X + 19625311 19625344 3'utr MKP-4 FlyBase G47502.1 CATACAAGTATGTATATTGATCTTTGCTGTTCCA 8 19625335 0.68337805 3 7 77 0.916666667 1.041392685 0.583333333 0.5 0.666666667 8 1 0 11 X:19625311-19625344 6 11.5 5756 FBgn0031044 267.6933333 13.86333333 21.32666667 0.042959606 0.829526328 0.53923101 1 -7 -3 0.01 dme-miR-283-5p 7mer-m1 GATATTT X 19625414 19625420 + X_19625414_19625420_+ 0.765586663 0.765586663 0.765586663 0 MKP-4 FBtr0074741 19624630 19625729 X + 19625390 19625428 3'utr MKP-4 FlyBase G62973.1 CACACAAACTATGAATGTATTTTAGATATTTAAACCTTT 9 19625411 0.83348416 5 8 89 1 1 0 0.111111111 0.2 9 0 0 10 X:19625390-19625428 7 MKP-4 FBtr0074741 19624630 19625729 GATATTT 7mer-m1 dme-miR-283-5p X + 19625389 19625418 3'utr MKP-4 FlyBase G47503.1 ACACACAAACTATGAATGTATTTTAGATAT 5 19625411 0.893212536 2 5 41 1 1 0.1 0.8 0.9 5 0 0 10 X:19625389-19625418 5 6.5 5757 FBgn0031044 267.6933333 13.86333333 21.32666667 0.024281516 0.468862707 0.304782745 3 3 3 0.01 dme-miR-970-3p 7mer-m8 TCTTATG X 19626599 19626605 - X_19626599_19626605_- 0.658999343 0.658999343 0.658999343 0 e(y)3 FBtr0334278 19626546 19628098 X - 19626560 19626617 3'utr e(y)3 FlyBase G69087.1 AAGTGGAATTATTCTTATGTATACATACTGAAAGATTTATTTTTAAGTCGAATAAAAC 20 19626606 0.849427319 6 19 185 1 1.477121255 0.033333333 0.25 0.5 20 0 0 30 X:19626560-19626617 7 e(y)3 FBtr0334278 19626546 19628098 TCTTATG 7mer-m8 dme-miR-970-3p X - 19626566 19626653 3'utr e(y)3 FlyBase G51954.1 CTTTATGCGAAAAGTAAATCTTAAGTCCTTCATATTAAGTGGAATTATTCTTATGTATACATACTGAAAGATTTATTTTTAAGTCGAA 12 19626581 0.98775482 9 11 99 0.947368421 1.255272505 0.105263158 0.416666667 0.631578947 12 1 0 18 X:19626566-19626653 7 11.5 5758 FBgn0087008 1841.593333 29.13666667 44.69333333 0.006244593 0.394691683 0.257309069 1 -24 -11.5 0.01 dme-miR-305-3p 6mer3-8 ATGTGC X 19627148 19627153 - X_19627148_19627153_- 1 1 1 0 e(y)3 FBtr0334278 19626546 19628098 X - 19627067 19627172 3'utr e(y)3 FlyBase G69091.1 CAGCCTAAGTAGTGTCTTCATGTGCGGTAGCTGCTTGTCCTTTTTTTTTTCGATTCGTTTAGTTTAGATTCGGTAGATTCGTAAGCGGGGTAGGGACTTGGCTCGG 34 19627151 0.98567455 12 30 290 0.897435897 1.544068044 0.179487179 0.088235294 0.205128205 34 4 0 35 X:19627067-19627172 6 e(y)3 FBtr0334278 19626546 19628098 ATGTGC 6mer3-8 dme-miR-305-3p X - 19627126 19627216 3'utr e(y)3 FlyBase G51957.1 ATTTATAAGAACCACGCCCTCTAGCCCATGTAAGTAGTTAAGCACAGCCTAAGTAGTGTCTTCATGTGCGGTAGCTGCTTGTCCTTTTTTT 19 19627141 0.980642167 7 19 140 1 1.491361694 0.451612903 0.368421053 0.612903226 19 0 0 31 X:19627126-19627216 6 18 5759 FBgn0087008 1841.593333 29.13666667 44.69333333 0.009774145 0.617778286 0.40274463 -2 -12 -7 0.01 dme-miR-1006-3p 7mer-m8 CGAATTT X 19627241 19627247 - X_19627241_19627247_- 0.661614704 0.661614704 0.661614704 0 e(y)3 FBtr0334278 19626546 19628098 X - 19627238 19627306 3'utr e(y)3 FlyBase G69092.1 CGCACTGTGCATCTGTATTTTCTATAGACATTATATTTGATTTTAAACGTCTTATGCGCCGAATTTTTG 19 19627252 0.827323731 11 18 160 0.956521739 1.342422681 0.043478261 0.157894737 0.304347826 19 1 0 22 X:19627238-19627306 7 e(y)3 FBtr0334278 19626546 19628098 CGAATTT 7mer-m8 dme-miR-1006-3p X - 19627232 19627262 3'utr e(y)3 FlyBase G51958.1 AAACGTCTTATGCGCCGAATTTTTGAACATG 5 19627253 0.735662856 3 5 28 1 0.698970004 0 0 0 5 0 0 5 X:19627232-19627262 7 7 5760 FBgn0087008 1841.593333 29.13666667 44.69333333 0.003801056 0.240247111 0.156622912 5 6 5.5 0.01 dme-miR-14-3p 6mer3-8 AAGACT X 19627662 19627667 - X_19627662_19627667_- 1 1 1 0 e(y)3 FBtr0334278 19626546 19628098 X - 19627598 19627693 3'utr e(y)3 FlyBase G69094.1 AACACCAAGTAGACCACGTTATGCTTAAGACTTTTTTAACGCCTAAGTTGAATAGCCTAGCACTAAGTCACAACTTCATTTGTTTCTAGTGAATTC 28 19627660 0.98952807 10 25 244 0.852941176 1.462397998 0.235294118 0.178571429 0.323529412 28 5 0 29 X:19627598-19627693 6 e(y)3 FBtr0334278 19626546 19628098 AAGACT 6mer3-8 dme-miR-14-3p X - 19627637 19627690 3'utr e(y)3 FlyBase G51961.1 ACCAAGTAGACCACGTTATGCTTAAGACTTTTTTAACGCCTAAGTTGAATAGCC 17 19627660 0.9905921 4 15 152 0.92 1.361727836 0.04 0.352941176 0.56 17 2 0 23 X:19627637-19627690 6 20.5 5761 FBgn0087008 1841.593333 29.13666667 44.69333333 0.011131665 0.703580826 0.458681384 -7 -7 -7 0.01 dme-miR-8-3p 6mer2-7 AGTATT X 19627878 19627883 - X_19627878_19627883_- 0.999999995 1 0.999999997 0 e(y)3 FBtr0334278 19626546 19628098 X - 19627763 19627947 3'utr e(y)3 FlyBase G69095.1 CACACACAGATGCATAGTATTAATGAATGCGACAAGGGGAAGAGAATGGATTAAGAGTGGAGAGAGTATTTAAGGTTTTTTTTTTACTACGATTATTCTTTATTTGTCAGTACTGCATTGTATTGATTGTGTTTTATACATATATACATATAAATATTCCTATTATAGTTATGTTACTTAACTTT 79 19627901 0.98441914 22 75 603 0.953488372 1.913813852 0.209302326 0.063291139 0.139534884 79 4 0 82 X:19627763-19627947 6 e(y)3 FBtr0334278 19626546 19628098 AGTATT 6mer2-7 dme-miR-8-3p X - 19627871 19627941 3'utr e(y)3 FlyBase G51963.1 CAGATGCATAGTATTAATGAATGCGACAAGGGGAAGAGAATGGATTAAGAGTGGAGAGAGTATTTAAGGTT 37 19627900 0.916966599 11 32 147 0.961538462 1.698970004 0.25 0.297297297 0.5 37 2 0 50 X:19627871-19627941 6 21.5 5762 FBgn0087008 1841.593333 29.13666667 44.69333333 0.011674673 0.737901842 0.481056086 18 17 17.5 0.01 dme-miR-305-3p 7mer-m1 TGTGCCG X 19641392 19641398 - X_19641392_19641398_- 0.825582373 0.825582373 0.825582373 0 CG12237 FBtr0074761 19641189 19641776 X - 19641374 19641409 3'utr CG12237 FlyBase G69125.1 ATTTATATCTGTGTGCCGGGACTTTACCTGCAAAAC 20 19641396 0.827919462 5 20 160 1 1.397940009 0.12 0.25 0.4 20 0 0 25 X:19641374-19641409 7 CG12237 FBtr0074761 19641189 19641776 TGTGCCG 7mer-m1 dme-miR-305-3p X - 19641377 19641409 3'utr CG12237 FlyBase G51983.2 ATTTATATCTGTGTGCCGGGACTTTACCTGCAA 24 19641397 0.833313328 7 22 173 0.965517241 1.447158031 0.068965517 0.208333333 0.344827586 24 1 0 28 X:19641377-19641409 7 20.5 5763 FBgn0031048 357.4333333 25.82 39.46333333 0.057353353 0.793958172 0.51946955 -2 -1 -1.5 0.01 dme-miR-7-5p 6mer3-8 GTCTTC X 19644330 19644335 + X_19644330_19644335_+ 1 0.999999998 0.999999999 0 Sec61gamma FBtr0340610 19644092 19644518 X + 19644255 19644409 3'utr Sec61gamma FlyBase G62988.1 ACGTATTGTAATGTTTCGATATTCCATTCATGAACAAGTTAGTTAATAAGATTCAAATGTAAAAAGGAATCACCCGTCTTCATAGCATTTGTTTGGGGTGCGCATCCCCGCTAATAAATGTTAAATTGATTTTCCGTGTACAAATGAGATTCTTT 28 19644334 0.977875513 13 26 180 0.9375 1.477121255 0.1875 0.107142857 0.21875 28 2 0 30 X:19644255-19644409 6 Sec61gamma FBtr0074745|FBtr0344986|FBtr0340610 19644092|19644092|19644092 19644395|19644395|19644518 GTCTTC 6mer3-8 dme-miR-7-5p X + 19644309 19644364 3'utr Sec61gamma FlyBase G47521.1 AAATGTAAAAAGGAATCACCCGTCTTCATAGCATTTGTTTGGGGTGCGCATCCCCG 10 19644335 0.968631695 5 8 53 0.909090909 1 0.181818182 0.1 0.181818182 10 1 0 10 X:19644309-19644364 6 12 5764 FBgn0031049 488 95.01 145.01 0.024590164 0.126302494 0.082752914 -4 -5 -4.5 0.01 dme-miR-965-3p 8mer-A1 TACGCTTA X 19646812 19646819 - X_19646812_19646819_- 0.625364919 0.625364919 0.625364919 0 Ranbp21 FBtr0340614|FBtr0074759 19646304|19646587 19647574|19647574 X - 19646783 19646836 3'utr Ranbp21 FlyBase G69132.1 AGGAATATTTCTGAAATTACGCTTAGGTTTAGTTGATAGGCAAAAGTTATTATT 45 19646820 0.864449139 8 37 452 0.826923077 1.031408464 0.038461538 0.133333333 0.25 45 6 3 43 X:19646783-19646836 8 Ranbp21 FBtr0074759|FBtr0340614 19646587|19646304 19647574|19647574 TACGCTTA 8mer-A1 dme-miR-965-3p X - 19646790 19646842 3'utr Ranbp21 FlyBase G51991.1 ATTTGAAGGAATATTTCTGAAATTACGCTTAGGTTTAGTTGATAGGCAAAAGT 20 19646820 0.943693021 8 17 174 0.903225806 1.447158031 0.129032258 0.4 0.612903226 20 3 0 28 X:19646790-19646842 8 29.5 5765 FBgn0031051 883.0066667 17.98 27.40666667 0.033408581 1.640711902 1.076380443 1 1 1 0.01 dme-miR-79-3p 6mer3-8 TAGCTT X 19647365 19647370 - X_19647365_19647370_- 1 1 1 0 Ranbp21 FBtr0340614|FBtr0074759 19646304|19646587 19647574|19647574 X - 19647326 19647424 3'utr Ranbp21 FlyBase G69135.1 ACGGCCACCTCAGCTGCCAAACTAGCGACGACTGAACTGAATGTAACTGTAAATTAGCTTAGACGATGAGTTCGCACTTTTTCTCGCCCTTGTCCAAGA 22 19647385 0.956578761 8 19 91 0.807692308 1.322219295 0.115384615 0.181818182 0.307692308 22 5 0 21 X:19647326-19647424 6 Ranbp21 FBtr0074759|FBtr0340614 19646587|19646304 19647574|19647574 TAGCTT 6mer3-8 dme-miR-79-3p X - 19647345 19647416 3'utr Ranbp21 FlyBase G51994.1 CTCAGCTGCCAAACTAGCGACGACTGAACTGAATGTAACTGTAAATTAGCTTAGACGATGAGTTCGCACTTT 14 19647392 0.969847588 5 11 62 0.8 1.204119983 0.1 0.357142857 0.55 14 4 0 16 X:19647345-19647416 6 3 5766 FBgn0031051 883.0066667 17.98 27.40666667 0.003397483 0.166852058 0.109462418 15 22 18.5 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT X 19676314 19676320 - X_19676314_19676320_- 0.658999504 0.6589995 0.658999502 0 dome FBtr0074756 19676059 19676538 X - 19676265 19676454 3'utr dome FlyBase G69149.1 CTTCAGCCGCATATCCTTCCAACGCCATGATCTGGTCACCGGATCGCCCCAGCAACCAAAATCCAGGACGAGGAACCCAGAACCCAGAACCTGTAAACTAGAATCTGGAATCTGGAAACTAGAAACCACTGTCGGGCAGCTGTTTATAGTAATTAGTGAAAACTCCTCGGACGAATGTAGTTTTACGTTT 138 19676311 0.979771602 26 126 868 0.905660377 1.857332496 0.100628931 0.123188406 0.238993711 138 14 1 144 X:19676265-19676454 7 dome FBtr0074756 19676059 19676538 GGCAGCT 7mer-m8 dme-miR-980-3p X - 19676264 19676339 3'utr dome FlyBase G52002.1 AAACTAGAAACCACTGTCGGGCAGCTGTTTATAGTAATTAGTGAAAACTCCTCGGACGAATGTAGTTTTACGTTTG 58 19676311 0.751639616 10 53 404 0.896551724 1.892094603 0.068965517 0.344827586 0.563218391 58 9 0 78 X:19676264-19676339 7 70.5 5767 FBgn0043903 649.3333333 16.12333333 24.73333333 0.108572895 4.372544966 2.850404313 -9 -9 -9 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG X 19686435 19686441 + X_19686435_19686441_+ 0.671796082 0.671796082 0.671796082 0 Ubqn FBtr0074750|FBtr0340612 19686065|19686065 19687240|19687658 X + 19686344 19686472 3'utr Ubqn FlyBase G63041.1 AACGAGCATAGTTGCCTCGAGATCGGAGAGATACTAGATATAGGTGGGTGATATGAATGACGCCGGTGAGAATGTTAGATAGGGATCGCATACCAAAGTGTTAGCACTTTCGTAGTTGATATCAGATTT 50 19686434 0.97752748 13 48 315 0.965517241 1.748188027 0.24137931 0.12 0.24137931 50 2 0 56 X:19686344-19686472 7 Ubqn FBtr0074750|FBtr0340612 19686065|19686065 19687240|19687658 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 19686353 19686460 3'utr Ubqn FlyBase G47549.1 AGTTGCCTCGAGATCGGAGAGATACTAGATATAGGTGGGTGATATGAATGACGCCGGTGAGAATGTTAGATAGGGATCGCATACCAAAGTGTTAGCACTTTCGTAGTT 40 19686442 0.962332356 13 36 226 0.916666667 1.439332694 0.166666667 0.375 0.583333333 40 4 1 55 X:19686353-19686460 7 25 5768 FBgn0031057 2464.196667 86.81666667 133.1533333 0.010145294 0.287963141 0.187753467 1 -7 -3 0.01 "dme-miR-995-3p,dme-miR-998-3p" 7mer-A1 GGTGCTA X 19686819 19686825 + X_19686819_19686825_+ 0.823349562 0.823349562 0.823349562 0 Ubqn FBtr0074750|FBtr0340612 19686065|19686065 19687240|19687658 X + 19686716 19686848 3'utr Ubqn FlyBase G63043.1 CAGATGCGAATTCCAGTTTTGTGTTTAAGAAAAAAGAATCGGTACAGAGATCAGAGGCGTAGTATATATCCTGTGTTCTGGTCAGGCAGTTTAGTTTTAGTCGGGTGCTAGTGGGCGTGGGCTATAGCCGCAG 96 19686827 0.984911161 15 94 758 0.991150442 2.049218023 0.353982301 0.135416667 0.265486726 96 1 0 112 X:19686716-19686848 7 Ubqn FBtr0074750|FBtr0340612 19686065|19686065 19687240|19687658 GGTGCTA 7mer-A1 "dme-miR-995-3p,dme-miR-998-3p" X + 19686750 19686845 3'utr Ubqn FlyBase G47550.1 AGAATCGGTACAGAGATCAGAGGCGTAGTATATATCCTGTGTTCTGGTCAGGCAGTTTAGTTTTAGTCGGGTGCTAGTGGGCGTGGGCTATAGCCG 65 19686827 0.984724916 10 65 515 1 1.977723605 0.442105263 0.369230769 0.568421053 65 0 0 95 X:19686750-19686845 7 54.5 5769 FBgn0031057 2464.196667 86.81666667 133.1533333 0.022116741 0.627759647 0.409302558 -8 -8 -8 0.01 dme-miR-79-3p 6mer2-7 AGCTTT X 19687401 19687406 + X_19687401_19687406_+ 1 1 1 0 Ubqn FBtr0340612 19686065 19687658 X + 19687391 19687534 3'utr Ubqn FlyBase G63047.1 ACTTTCGAAAAGCTTTCCTTCGCGCGCTCACCGTTTATATAAGATATGGATTCAGTGTATACCCTGTAAGTGCTACCACCACATAGCCTCGCTCGTCCGCTGTGGGATTGGCTGGTCGGCCGGCTGGCTGGCTGGCCGGCTGGC 27 19687406 0.981930927 16 25 179 0.928571429 1.414973348 0.214285714 0.037037037 0.071428571 27 2 0 26 X:19687391-19687534 6 Ubqn FBtr0340612 19686065 19687658 AGCTTT 6mer2-7 dme-miR-79-3p X + 19687396 19687482 3'utr Ubqn FlyBase G47552.1 CGAAAAGCTTTCCTTCGCGCGCTCACCGTTTATATAAGATATGGATTCAGTGTATACCCTGTAAGTGCTACCACCACATAGCCTCGC 16 19687407 0.981339348 9 14 94 0.80952381 1.230448921 0.285714286 0.25 0.428571429 16 4 0 17 X:19687396-19687482 6 8 5770 FBgn0031057 2464.196667 86.81666667 133.1533333 0.003246494 0.092148205 0.060081109 -5 -6 -5.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 19694392 19694398 - X_19694392_19694398_- 0.801970437 0.801970437 0.801970437 0 CG14229 FBtr0335023|FBtr0335023|FBtr0335023|FBtr0074753|FBtr0074753|FBtr0074753|FBtr0344968|FBtr0344968|FBtr0344968 19693975|19693975|19693975|19694196|19694196|19694196|19694196|19694196|19694196 19694566|19694566|19694566|19694566|19694566|19694566|19694566|19694566|19694566 X - 19694348 19694462 3'utr CG14229 FlyBase G69165.1 CGCCTCCGTTCAGTCTTCTCTGCGCACGGATTCGGATATCCGTGTCTGGAGTCACTTGCGTTTGTGTGATAAGCATTGTTTACTTGCATGGCATTAGCATCACCCCTGATGCATA 74 19694400 0.718083136 18 69 579 0.939759036 1.591064607 0.13253012 0.121621622 0.21686747 74 4 1 78 X:19694348-19694462 7 CG14229 FBtr0344968|FBtr0344968|FBtr0344968|FBtr0074753|FBtr0074753|FBtr0074753|FBtr0335023|FBtr0335023|FBtr0335023 19694196|19694196|19694196|19694196|19694196|19694196|19693975|19693975|19693975 19694566|19694566|19694566|19694566|19694566|19694566|19694566|19694566|19694566 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 19694354 19694426 3'utr CG14229 FlyBase G52014.1 TATCCGTGTCTGGAGTCACTTGCGTTTGTGTGATAAGCATTGTTTACTTGCATGGCATTAGCATCACCCCTGA 42 19694400 0.896901871 9 35 332 0.861538462 1.748188027 0.092307692 0.333333333 0.569230769 42 9 0 56 X:19694354-19694426 7 37 5771 FBgn0031059 134 20.55333333 31.35333333 0.276119403 1.800194616 1.18009781 2 2 2 0.01 dme-miR-7-5p 7mer-m8 GTCTTCC X 19699007 19699013 + X_19699007_19699013_+ 0.705950313 0.705950313 0.705950313 0 Cdc42 FBtr0309215|FBtr0074751|FBtr0309214 19698593|19698593|19698593 19699938|19699252|19699938 X + 19698958 19699065 3'utr Cdc42 FlyBase G63059.1 TTGGTCCACTGTGACCAGGCGGCTGGGCAGTTGCCCCCAACTCGGGACAGTCTTCCGCCCCACAAGCTTCAGCTCCAATCCCCGCCAGGATCCAATCGCAGCCAATCG 38 19699010 0.92036885 9 36 149 0.952380952 1.602059991 0.047619048 0.105263158 0.19047619 38 2 0 40 X:19698958-19699065 7 Cdc42 FBtr0309214|FBtr0074751|FBtr0309215 19698593|19698593|19698593 19699938|19699252|19699938 GTCTTCC 7mer-m8 dme-miR-7-5p X + 19698937 19699038 3'utr Cdc42 FlyBase G47559.1 TATTTTGGTCGGTTTCTATGTTTGGTCCACTGTGACCAGGCGGCTGGGCAGTTGCCCCCAACTCGGGACAGTCTTCCGCCCCACAAGCTTCAGCTCCAATCC 27 19699010 0.932785867 4 25 106 1 1.568201724 0.027027027 0.333333333 0.513513514 27 0 0 37 X:19698937-19699038 7 25.5 5772 FBgn0010341 5859.21 357.3733333 549.4666667 0.004352123 0.071353953 0.046408639 -3 -3 -3 0.01 dme-miR-8-3p 6mer2-7 AGTATT X 19699536 19699541 + X_19699536_19699541_+ 1 1 1 0 Cdc42 FBtr0309215|FBtr0309214 19698593|19698593 19699938|19699938 X + 19699287 19699658 3'utr Cdc42 FlyBase G63061.1 AAAAACAATCCAGAACAGAACAGAATGTGGGGCGATTCGAAAAGAACCATGCACTTATTCGTTTTGCCTCAGTCGATGAAATCCGCGGGAATCCACGTCGATATTGTCCCGAAAGGAGCAACGTGCGAGAATTATATTAAATATTTATGATAACTGATCGCGTAATGTTTAAACAGCGGAGGTCGGATGGAATTCGCTAGCATGCAGATATGAAAGTGAAGCTTATTATGTAATAAAACTAAGCGTATGAGTATTGAAATATGATTAAAAGTAAATTAAATGAACCTAAAGGAGGAGATAAAGGATCAGCAAGAGATGCGAGAACCGAACTAGGCGTTGCAACCACAACACAAACACACATCTGAAATCTAC 81 19699534 0.965086363 37 76 399 0.951456311 1.69019608 0.213592233 0.222222222 0.388349515 81 4 1 98 X:19699287-19699658 6 Cdc42 FBtr0309214|FBtr0309215 19698593|19698593 19699938|19699938 AGTATT 6mer2-7 dme-miR-8-3p X + 19699424 19699657 3'utr Cdc42 FlyBase G47561.1 TAAATATTTATGATAACTGATCGCGTAATGTTTAAACAGCGGAGGTCGGATGGAATTCGCTAGCATGCAGATATGAAAGTGAAGCTTATTATGTAATAAAACTAAGCGTATGAGTATTGAAATATGATTAAAAGTAAATTAAATGAACCTAAAGGAGGAGATAAAGGATCAGCAAGAGATGCGAGAACCGAACTAGGCGTTGCAACCACAACACAAACACACATCTGAAATCTA 42 19699534 0.965544632 22 39 211 0.93220339 1.263241435 0.220338983 0.333333333 0.525423729 42 2 2 55 X:19699424-19699657 6 15.5 5773 FBgn0010341 5859.21 357.3733333 549.4666667 0.002645408 0.043372011 0.028209173 2 2 2 0.01 dme-miR-33-5p 6mer2-7 AATGCA X 19699817 19699822 + X_19699817_19699822_+ 0.947798286 0.999990337 0.973894311 0.036905317 Cdc42 FBtr0309215|FBtr0309214 19698593|19698593 19699938|19699938 X + 19699784 19699841 3'utr Cdc42 FlyBase G63062.1 AAAACGACAAAAGATGAAAGGAAAATAAGAACTAATGCATTTTTTAATATTTTTATAT 25 19699809 0.968571233 6 24 147 0.931034483 1.431363764 0.068965517 0.12 0.24137931 25 2 0 27 X:19699784-19699841 6 Cdc42 FBtr0309214|FBtr0309215 19698593|19698593 19699938|19699938 AATGCA 6mer2-7 dme-miR-33-5p X + 19699799 19699842 3'utr Cdc42 FlyBase G47562.1 GAAAGGAAAATAAGAACTAATGCATTTTTTAATATTTTTATATG 16 19699809 0.954251777 6 15 81 1 1.380211242 0.166666667 0.4375 0.625 16 0 0 24 X:19699799-19699842 6 19.5 5774 FBgn0010341 5859.21 357.3733333 549.4666667 0.003328094 0.054564788 0.035488959 8 8 8 0.01 dme-miR-970-3p 6mer3-8 TCTTAT X 19699912 19699917 + X_19699912_19699917_+ 1 1 1 0 Cdc42 FBtr0309215|FBtr0309214 19698593|19698593 19699938|19699938 X + 19699863 19699939 3'utr Cdc42 FlyBase G63063.1 ATTTTTTTTCTAGACCTTAGTGATTTAACATTATTGATTTCAGATAATATCTTATAATAAAACGAAATCCAAAACGA 41 19699887 0.69340635 10 41 377 1 1.72427587 0.018867925 0.292682927 0.452830189 41 0 0 53 X:19699863-19699939 6 Cdc42 FBtr0309214|FBtr0309215 19698593|19698593 19699938|19699938 TCTTAT 6mer3-8 dme-miR-970-3p X + 19699865 19699924 3'utr Cdc42 FlyBase G47563.1 TTTTTTTCTAGACCTTAGTGATTTAACATTATTGATTTCAGATAATATCTTATAATAAAA 27 19699887 0.761689656 7 26 245 0.974358974 1.579783597 0.051282051 0.296296296 0.512820513 27 1 0 38 X:19699865-19699924 6 7.5 5775 FBgn0010341 5859.21 357.3733333 549.4666667 0.001280036 0.020986457 0.0136496 25 25 25 0.01 dme-miR-2b-2-5p 7mer-m8 TTGAAGA X 19734300 19734306 + X_19734300_19734306_+ 0.612357402 0.631525999 0.621941701 0.013554247 AP-1-2beta FBtr0074789 19734229 19734581 X + 19734229 19734315 stop_codon AP-1-2beta FlyBase G63090.1 AAGCGTTCCATGGCGCACATCCGATGGCATAGGATAAGCACAAAGCAATTGGAGCTATCGATTTGCGTGTGTTGAAGATTAGCTCAA 26 19734307 0.939278263 7 26 158 1 1.531478917 0.058823529 0.269230769 0.441176471 26 0 0 34 X:19734229-19734315 7 AP-1-2beta FBtr0074789 19734229 19734581 TTGAAGA 7mer-m8 dme-miR-2b-2-5p X + 19734287 19734319 3'utr AP-1-2beta FlyBase G47580.1 CGATTTGCGTGTGTTGAAGATTAGCTCAACAAT 11 19734307 0.819959957 2 11 82 1 1.204119983 0.0625 0.363636364 0.5625 11 0 0 16 X:19734287-19734319 7 12 5776 FBgn0010380 943.23 35.09 53.51 0.012722242 0.341977771 0.224257148 -7 -7 -7 0.01 dme-miR-317-3p 6mer3-8 TGTGTT X 19740770 19740775 - X_19740770_19740775_- 1 1 1 0 CoVIb FBtr0074815|FBtr0074817|FBtr0308683|FBtr0074816 19740535|19740684|19740535|19740535 19740906|19740906|19740906|19740906 X - 19740754 19740802 3'utr CoVIb FlyBase G69183.1 ATCCGGCAATTGCAACAGAGACTAGTTTGTGTTTGTGCTTTCCCCAGCG 7 19740776 0.970837976 4 7 46 1 1.079181246 0 0.285714286 0.583333333 7 0 0 12 X:19740754-19740802 6 CoVIb FBtr0074816|FBtr0308683|FBtr0074817|FBtr0074815 19740535|19740535|19740684|19740535 19740906|19740906|19740906|19740906 TGTGTT 6mer3-8 dme-miR-317-3p X - 19740774 19740812 3'utr CoVIb FlyBase G52032.1 GGTAACCAGAATCCGGCAATTGCAACAGAGACTAGTTTG 5 19740777 0.960901011 2 4 22 0.8 0.602059991 0.4 0 0 5 1 0 4 X:19740774-19740812 1 4.5 5777 FBgn0031066 3558.956667 798.5366667 1223.406667 0.001264416 0.005635308 0.003678254 1 2 1.5 0.01 dme-miR-308-3p 7mer-m1 TGTGATT X 19741426 19741432 - X_19741426_19741432_- 0.521223855 0.521223855 0.521223855 0 CG18809 FBtr0331746|FBtr0331747|FBtr0074811|FBtr0074810 19741222|19741222|19741222|19741222 19741779|19741779|19741779|19741779 X - 19741401 19741454 3'utr CG18809 FlyBase G69186.1 CGCAAACTGAAGAACTAACCATTGTGATTTATATATCTATCTCTTCCTTCCCGT 14 19741433 0.983668026 5 14 110 1 1.255272505 0 0.285714286 0.444444444 14 0 0 18 X:19741401-19741454 7 CG18809 FBtr0074810|FBtr0074811|FBtr0331747|FBtr0331746 19741222|19741222|19741222|19741222 19741779|19741779|19741779|19741779 TGTGATT 7mer-m1 dme-miR-308-3p X - 19741399 19741450 3'utr CG18809 FlyBase G52035.1 AACTGAAGAACTAACCATTGTGATTTATATATCTATCTCTTCCTTCCCGTTT 7 19741433 0.989581504 3 7 68 1 0.954242509 0.222222222 0.142857143 0.333333333 7 0 0 9 X:19741399-19741450 7 10 5778 FBgn0042132 250.6633333 14.18333333 21.89333333 0.039894148 0.705052879 0.456760049 1 1 1 0.01 dme-miR-304-5p 6mer2-7 GAGATT X 19745155 19745160 + X_19745155_19745160_+ 1 1 1 0 Rpp20 FBtr0091935|FBtr0346040 19745104|19745104 19745747|19745898 X + 19745116 19745188 3'utr Rpp20 FlyBase G63094.1 CTCTCGGAGCTGGTGCGCTGGCTGGGGCTCACCGAGTTCGAGATTCTGGTCAATCTGTGCGGCCTGCTGGTGT 48 19745159 0.790044023 6 48 327 1 1.755874856 0.210526316 0.1875 0.315789474 48 0 0 57 X:19745116-19745188 6 Rpp20 FBtr0346040|FBtr0091935 19745104|19745104 19745898|19745747 GAGATT 6mer2-7 dme-miR-304-5p X + 19745114 19745177 3'utr Rpp20 FlyBase G47584.1 AACTCTCGGAGCTGGTGCGCTGGCTGGGGCTCACCGAGTTCGAGATTCTGGTCAATCTGTGCGG 30 19745159 0.787954229 5 30 200 1 1.612783857 0.268292683 0.3 0.487804878 30 0 0 41 X:19745114-19745177 6 35.5 5779 FBgn0066304 95 9.253333333 14.03666667 0.373684211 3.836455331 2.529090477 -4 -4 -4 0.01 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG X 19745346 19745352 + X_19745346_19745352_+ 0.70297214 0.70297214 0.70297214 0 Rpp20 FBtr0091935|FBtr0346040 19745104|19745104 19745747|19745898 X + 19745222 19745365 3'utr Rpp20 FlyBase G63095.1 AGGCCAGGGCCGGACCCGGTGGCATACTCCCGGAGCCCATGGGCGACTGGTTCACCGTCTTCAGCCCCCTGTTCTTCATCGACATCTGCAACGCGTACTTTTGCGTCATTGTGGGCATCCGCATGTACCTGGACTCTAACAACA 71 19745345 0.972000771 10 71 410 1 1.939519253 0.091954023 0.183098592 0.333333333 71 0 0 87 X:19745222-19745365 7 Rpp20 FBtr0346040|FBtr0091935 19745104|19745104 19745898|19745747 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" X + 19745321 19745368 3'utr Rpp20 FlyBase G47585.2 TTTGCGTCATTGTGGGCATCCGCATGTACCTGGACTCTAACAACAAGC 49 19745345 0.830790965 4 49 277 1 1.86923172 0 0.367346939 0.581081081 49 0 0 74 X:19745321-19745368 7 55.5 5780 FBgn0066304 95 9.253333333 14.03666667 0.584210526 5.997838617 3.953930183 1 1 1 0.01 dme-miR-308-3p 7mer-m1 TGTGATT X 19758906 19758912 + X_19758906_19758912_+ 0.521223855 0.521223855 0.521223855 0 Pmp70 FBtr0335155|FBtr0074795|FBtr0335157|FBtr0335156 19758756|19758756|19758756|19758756 19759280|19759280|19759280|19759280 X + 19758879 19758925 3'utr Pmp70 FlyBase G63114.1 AAGTTGGAAATGCTTCCTTGTTTCGATTGTGATTGTTTCTTTTGTAC 47 19758905 0.687773863 6 45 588 0.960784314 1.389166084 0.098039216 0.085106383 0.156862745 47 1 1 49 X:19758879-19758925 7 Pmp70 FBtr0335156|FBtr0335157|FBtr0074795|FBtr0335155 19758756|19758756|19758756|19758756 19759280|19759280|19759280|19759280 TGTGATT 7mer-m1 dme-miR-308-3p X + 19758875 19758919 3'utr Pmp70 FlyBase G47596.1 TTGCAAGTTGGAAATGCTTCCTTGTTTCGATTGTGATTGTTTCTT 39 19758912 0.876690919 8 36 468 0.925925926 1.096910013 0 0.307692308 0.5 39 1 3 50 X:19758875-19758919 7 42 5781 FBgn0031069 864.5033333 34.21666667 52.20333333 0.048582809 1.227471992 0.804546325 1 -6 -2.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG X 19759091 19759096 + X_19759091_19759096_+ 1 1 1 0 Pmp70 FBtr0335155|FBtr0074795|FBtr0335157|FBtr0335156 19758756|19758756|19758756|19758756 19759280|19759280|19759280|19759280 X + 19759021 19759173 3'utr Pmp70 FlyBase G63115.1 AAAGTAGTCGGCGCACAGCCACAAGCGATGGATGAGCGTTTAGAAAAGCTTTTAGTGAATAACACACCCATACCTGTAGTAGACCTGCATACCGCACAAGTCCCAAATCGCGCATAGAGAACTTATAGTAATTTGTAAAATACGCTTGGCTTA 35 19759096 0.975478859 15 33 208 0.951219512 1.591064607 0.12195122 0.142857143 0.268292683 35 2 0 39 X:19759021-19759173 6 Pmp70 FBtr0335156|FBtr0335157|FBtr0074795|FBtr0335155 19758756|19758756|19758756|19758756 19759280|19759280|19759280|19759280 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" X + 19759037 19759111 3'utr Pmp70 FlyBase G47598.1 AGCCACAAGCGATGGATGAGCGTTTAGAAAAGCTTTTAGTGAATAACACACCCATACCTGTAGTAGACCTGCATA 9 19759097 0.9629874 5 7 42 0.9375 1.176091259 0.0625 0.444444444 0.6875 9 1 0 15 X:19759037-19759111 6 10 5782 FBgn0031069 864.5033333 34.21666667 52.20333333 0.011567335 0.292255236 0.191558649 -5 -6 -5.5 0.01 dme-miR-79-3p 6mer3-8 TAGCTT X 19759339 19759344 - X_19759339_19759344_- 1 1 1 0 CG12702 FBtr0074809|FBtr0335137|FBtr0346378 19759171|19759171|19759171 19759370|19759370|19759370 X - 19759296 19759348 3'utr CG12702 FlyBase G69188.1 AATATAGCTTAGACTAGTAGCATCTATCGATGAACTCCACTCCGCCGGCATCA 17 19759340 0.892375292 4 15 111 0.842105263 1.204119983 0.052631579 0.117647059 0.210526316 17 3 0 16 X:19759296-19759348 6 CG12702 FBtr0346378|FBtr0335137|FBtr0074809 19759171|19759171|19759171 19759370|19759370|19759370 TAGCTT 6mer3-8 dme-miR-79-3p X - 19759297 19759350 3'utr CG12702 FlyBase G52036.1 TTAATATAGCTTAGACTAGTAGCATCTATCGATGAACTCCACTCCGCCGGCATC 6 19759340 0.980243268 3 6 45 1 0.903089987 0 0.333333333 0.5 6 0 0 8 X:19759297-19759350 6 7.5 5783 FBgn0031070 235.6866667 9.673333333 14.61 0.03182191 0.77532736 0.513347023 -4 -4 -4 0.01 dme-miR-980-5p 6mer2-7 AAAAAC X 19776385 19776390 - X_19776385_19776390_- 1 1 1 0 vfl FBtr0344733|FBtr0074808|FBtr0345014|FBtr0074807 19775985|19775985|19775985|19775985 19776884|19777495|19777495|19777495 X - 19776354 19776400 5'utr vfl FlyBase G69198.1 TGTTAGCCTTAAAAACGCCAAATTGTCTGTCATAGCAAAAGGAAGCA 26 19776378 0.956427434 3 26 155 1 1.544068044 0 0.230769231 0.428571429 26 0 0 35 X:19776354-19776400 6 vfl FBtr0345014|FBtr0074807|FBtr0344733|FBtr0074808 19775985|19775985|19775985|19775985 19777495|19777495|19776884|19777495 AAAAAC 6mer2-7 dme-miR-980-5p X - 19776354 19776401 5'utr vfl FlyBase G52043.1 ATGTTAGCCTTAAAAACGCCAAATTGTCTGTCATAGCAAAAGGAAGCA 21 19776378 0.959247644 4 21 117 1 1.51851394 0.090909091 0.476190476 0.666666667 21 0 0 33 X:19776354-19776401 6 22 5784 FBgn0259789 8.736666667 0.15 0.24 2.518122854 146.6666667 91.66666667 -12 -12 -12 0.01 dme-miR-263a-5p 7mer-A1 TGCCATA X 19776530 19776536 - X_19776530_19776536_- 0.782911824 0.782911824 0.782911824 0 vfl FBtr0344733|FBtr0074808|FBtr0345014|FBtr0074807 19775985|19775985|19775985|19775985 19776884|19777495|19777495|19777495 X - 19776471 19776539 5'utr vfl FlyBase G69199.1 GAATGCCATATACACGATATGTAAACTAAAAATCAGCAACTATATGCCAATTGATATATATATATATAC 7 19776529 0.972721016 5 6 38 0.9 0.954242509 0.1 0.285714286 0.5 7 1 0 9 X:19776471-19776539 7 vfl FBtr0345014|FBtr0074807|FBtr0344733|FBtr0074808 19775985|19775985|19775985|19775985 19777495|19777495|19776884|19777495 TGCCATA 7mer-A1 dme-miR-263a-5p X - 19776473 19776549 5'utr vfl FlyBase G52044.1 AACAACACACGAATGCCATATACACGATATGTAAACTAAAAATCAGCAACTATATGCCAATTGATATATATATATAT 6 19776531 0.890362711 6 6 26 1 0.77815125 0.333333333 0 0 6 0 0 6 X:19776473-19776549 7 3 5785 FBgn0259789 8.736666667 0.15 0.24 0.343380389 20 12.5 -7 -5 -6 0.01 dme-miR-8-3p 6mer2-7 AGTATT X 19832499 19832504 - X_19832499_19832504_- 1 1 1 0 pico FBtr0074804|FBtr0303995|FBtr0074805|FBtr0303996 19831605|19831605|19830213|19831605 19833338|19833338|19833338|19833338 X - 19832410 19832526 3'utr pico FlyBase G69207.1 TTTTAATTGTTTAGTTGCTCGTAGTATTGATTTTATACATTATATCTTTTTTTTGCGATTATCTTTGTAACGGTAGAGTGAACGTTTTGTGAGCGCATGAAATGCGCTGCGCTAGCA 31 19832495 0.993480905 11 30 371 0.972972973 1.556302501 0.189189189 0.161290323 0.297297297 31 1 0 36 X:19832410-19832526 6 pico FBtr0074804|FBtr0303995|FBtr0074805|FBtr0303996 19831605|19831605|19830213|19831605 19833338|19833338|19833338|19833338 AGTATT 6mer2-7 dme-miR-8-3p X - 19832481 19832525 3'utr pico FlyBase G52052.1 TTTAATTGTTTAGTTGCTCGTAGTATTGATTTTATACATTATATC 13 19832495 0.871755906 8 11 153 0.772727273 1.230448921 0 0.538461538 0.727272727 13 5 0 17 X:19832481-19832525 6 18.5 5786 FBgn0261811 2157.516667 40.99333333 63.13 0.008574673 0.451292893 0.293046095 -9 -9 -9 0.01 dme-miR-277-3p 7mer-m8 TGCATTT X 19832607 19832613 - X_19832607_19832613_- 0.620204266 0.620204266 0.620204266 0 pico FBtr0074804|FBtr0303995|FBtr0074805|FBtr0303996 19831605|19831605|19830213|19831605 19833338|19833338|19833338|19833338 X - 19832592 19832637 3'utr pico FlyBase G69208.1 ATTTTAGTTTGTAAAAAGGAAAAATGCATTTTAGAAACGATAGTGC 19 19832610 0.85823377 6 18 151 0.956521739 1.342422681 0.086956522 0.210526316 0.347826087 19 1 0 22 X:19832592-19832637 7 pico FBtr0074804|FBtr0303995|FBtr0074805|FBtr0303996 19831605|19831605|19830213|19831605 19833338|19833338|19833338|19833338 TGCATTT 7mer-m8 dme-miR-277-3p X - 19832584 19832637 3'utr pico FlyBase G52053.1 ATTTTAGTTTGTAAAAAGGAAAAATGCATTTTAGAAACGATAGTGCATTATTTA 13 19832611 0.978217934 5 12 94 0.941176471 1.204119983 0 0.230769231 0.411764706 13 1 0 16 X:19832584-19832637 7 14.5 5787 FBgn0261811 2157.516667 40.99333333 63.13 0.00672069 0.353716051 0.229684777 -3 -2 -2.5 0.01 dme-miR-988-3p 6mer3-8 ACAAGG X 19905112 19905117 + X_19905112_19905117_+ 1 1 1 0 Hers FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800|FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19906687|19906687|19906687|19906687|19908108|19908108|19906687|19906687 X + 19904824 19905126 stop_codon Hers FlyBase G63192.1 GGGTTTCCAGTGCGAACGGTGCCGGAACACACCAATCCGGAGCTGGTGATGTTCTGCCGCCGAGCCTATGAGTTCCGGACGCGACGTCTGCTCAAGCTGCCCCATAAGAACGGGCTCGTGTGCAGCTCCAGCTAGCGCAAGGCATGAGCCATTGCGATCGAGCTCCCGTCAACCCAGGCAATGGATGAACTGCGGAGTGTAGGAACAATAGCTTAAATTCAGATTGCAGTGGGAATTGGATATTGATATGCGGAGTGGCGATGGAGAAAGCCCTGGCAGAGGGGATGGACAAGGAACTACTCA 75 19905109 0.988835788 33 73 276 0.96969697 1.982271233 0.343434343 0.266666667 0.444444444 75 3 0 96 X:19904824-19905126 6 Hers FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523|FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19908108|19908108|19906687|19906687|19906687|19906687|19906687|19906687 ACAAGG 6mer3-8 dme-miR-988-3p X + 19905078 19905126 3'utr Hers FlyBase G47651.2 GTGGCGATGGAGAAAGCCCTGGCAGAGGGGATGGACAAGGAACTACTCA 15 19905109 0.910054602 2 12 29 0.739130435 0.929418926 0.130434783 0.333333333 0.565217391 15 5 1 17 X:19905078-19905126 6 14.5 5788 FBgn0052529 4274.003333 62.55666667 96.43 0.003392604 0.231789844 0.150368143 3 3 3 0.01 dme-miR-8-3p 7mer-m8 CAGTATT X 19905160 19905166 + X_19905160_19905166_+ 0.661615243 0.661615243 0.661615243 0 Hers FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800|FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19906687|19906687|19906687|19906687|19908108|19908108|19906687|19906687 X + 19905142 19905178 3'utr Hers FlyBase G63193.1 ATTGTTTTGATCAGTCTACAGTATTGTTAAAGATATT 19 19905158 0.612760804 6 17 186 0.9 1.255272505 0 0.052631579 0.1 19 2 0 18 X:19905142-19905178 7 Hers FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523|FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19908108|19908108|19906687|19906687|19906687|19906687|19906687|19906687 CAGTATT 7mer-m8 dme-miR-8-3p X + 19905127 19905180 3'utr Hers FlyBase G47652.1 TAGAGAGAAAGTTACATTGTTTTGATCAGTCTACAGTATTGTTAAAGATATTTT 19 19905157 0.989674669 8 18 176 0.961538462 1.397940009 0.192307692 0.263157895 0.461538462 19 1 0 25 X:19905127-19905180 7 18 5789 FBgn0052529 4274.003333 62.55666667 96.43 0.004211508 0.287739117 0.186663901 2 3 2.5 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG X 19905224 19905229 + X_19905224_19905229_+ 1 1 1 0 Hers FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800|FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19906687|19906687|19906687|19906687|19908108|19908108|19906687|19906687 X + 19905185 19905239 3'utr Hers FlyBase G63194.1 CTTTGTTGTTAAGAGATATCTGCAAGGATGGGCCCCCGGGCTGTGCATCTGCATT 35 19905205 0.76323209 4 35 131 1 1.579783597 0.315789474 0.085714286 0.157894737 35 0 0 38 X:19905185-19905239 6 Hers FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523|FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19908108|19908108|19906687|19906687|19906687|19906687|19906687|19906687 GCTGTG 6mer2-7 dme-miR-1008-3p X + 19905188 19905236 3'utr Hers FlyBase G47653.1 TGTTGTTAAGAGATATCTGCAAGGATGGGCCCCCGGGCTGTGCATCTGC 20 19905205 0.877621212 7 20 71 1 1.556302501 0.194444444 0.6 0.777777778 20 0 0 36 X:19905188-19905236 6 25.5 5790 FBgn0052529 4274.003333 62.55666667 96.43 0.005966303 0.407630415 0.264440527 19 19 19 0.01 dme-miR-932-5p 7mer-m8 GGAATTG X 19905694 19905700 + X_19905694_19905700_+ 0.70297287 0.70297287 0.70297287 0 Hers FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800|FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19906687|19906687|19906687|19906687|19908108|19908108|19906687|19906687 X + 19905608 19905705 3'utr Hers FlyBase G63197.1 AAGTTGTATGTATTTATTATCATTAATATCGAGTAAGTCAGCATTCTGTGTACAGTTTTCCGCTCGCTTTTGCTCTAATCGCTCAAGGAATTGGTTTA 22 19905678 0.777246745 14 20 205 0.916666667 1.041392685 0.208333333 0.090909091 0.166666667 22 1 1 22 X:19905608-19905705 7 Hers FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523|FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19908108|19908108|19906687|19906687|19906687|19906687|19906687|19906687 GGAATTG 7mer-m8 dme-miR-932-5p X + 19905638 19905711 3'utr Hers FlyBase G47656.1 GAGTAAGTCAGCATTCTGTGTACAGTTTTCCGCTCGCTTTTGCTCTAATCGCTCAAGGAATTGGTTTAACCACC 12 19905665 0.985472996 9 11 95 0.947368421 1.255272505 0.263157895 0.5 0.684210526 12 1 0 18 X:19905638-19905711 7 3.5 5791 FBgn0052529 4274.003333 62.55666667 96.43 0.000818904 0.055949273 0.036295759 16 29 22.5 0.01 dme-miR-304-5p 7mer-m8 TGAGATT X 19906258 19906264 + X_19906258_19906264_+ 0.616090778 0.620203442 0.61814711 0.002908047 Hers FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800|FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19906687|19906687|19906687|19906687|19908108|19908108|19906687|19906687 X + 19906234 19906460 3'utr Hers FlyBase G63201.1 TCTAACTATAATTTCTGACATATTTGAGATTTCTGGCTCCAGAGGCGGAAAACTGGATGGCTTGACATCGATCCTTGCTAGGCGCTGTTGGTATATATTTTTATTTGTTGTTAGTTTTTGTAAGCGATTGAACACACATTTTGTACTCTTGATTTGACATTTATCTTTTGTGTTCGCCTTAGTTTGGAAATTTGATTTCAGAGACATGATTTTCTTTCGGTTAACTA 99 19906257 0.965066754 35 93 938 0.947826087 2.037426498 0.252173913 0.141414141 0.260869565 99 6 0 109 X:19906234-19906460 7 Hers FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523|FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19908108|19908108|19906687|19906687|19906687|19906687|19906687|19906687 TGAGATT 7mer-m8 dme-miR-304-5p X + 19906244 19906445 3'utr Hers FlyBase G47659.1 ATTTCTGACATATTTGAGATTTCTGGCTCCAGAGGCGGAAAACTGGATGGCTTGACATCGATCCTTGCTAGGCGCTGTTGGTATATATTTTTATTTGTTGTTAGTTTTTGTAAGCGATTGAACACACATTTTGTACTCTTGATTTGACATTTATCTTTTGTGTTCGCCTTAGTTTGGAAATTTGATTTCAGAGACATGATTT 41 19906257 0.989288363 20 40 390 0.984375 1.799340549 0.171875 0.43902439 0.640625 41 1 0 63 X:19906244-19906445 7 8 5792 FBgn0052529 4274.003333 62.55666667 96.43 0.001871781 0.127884052 0.082961734 1 1 1 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC X 19906402 19906408 + X_19906402_19906408_+ 0.661615645 0.661615645 0.661615645 0 Hers FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800|FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19906687|19906687|19906687|19906687|19908108|19908108|19906687|19906687 X + 19906234 19906460 3'utr Hers FlyBase G63201.1 TCTAACTATAATTTCTGACATATTTGAGATTTCTGGCTCCAGAGGCGGAAAACTGGATGGCTTGACATCGATCCTTGCTAGGCGCTGTTGGTATATATTTTTATTTGTTGTTAGTTTTTGTAAGCGATTGAACACACATTTTGTACTCTTGATTTGACATTTATCTTTTGTGTTCGCCTTAGTTTGGAAATTTGATTTCAGAGACATGATTTTCTTTCGGTTAACTA 99 19906401 0.965066754 35 93 938 0.947826087 2.037426498 0.252173913 0.141414141 0.260869565 99 6 0 109 X:19906234-19906460 7 Hers FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523|FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19908108|19908108|19906687|19906687|19906687|19906687|19906687|19906687 TGTGTTC 7mer-m8 dme-miR-317-3p X + 19906244 19906445 3'utr Hers FlyBase G47659.1 ATTTCTGACATATTTGAGATTTCTGGCTCCAGAGGCGGAAAACTGGATGGCTTGACATCGATCCTTGCTAGGCGCTGTTGGTATATATTTTTATTTGTTGTTAGTTTTTGTAAGCGATTGAACACACATTTTGTACTCTTGATTTGACATTTATCTTTTGTGTTCGCCTTAGTTTGGAAATTTGATTTCAGAGACATGATTT 41 19906401 0.989288363 20 40 390 0.984375 1.799340549 0.171875 0.43902439 0.640625 41 1 0 63 X:19906244-19906445 7 14 5793 FBgn0052529 4274.003333 62.55666667 96.43 0.003275617 0.223797091 0.145183034 1 1 1 0.01 dme-miR-995-5p 7mer-A1 ATTCGGA X 20157242 20157248 - X_20157242_20157248_- 0.782911824 0.782911824 0.782911824 0 Rab35 FBtr0070028|FBtr0333549|FBtr0333548|FBtr0303258 20156477|20155764|20157143|20157088 20157582|20157582|20157582|20157582 X - 20157214 20157254 3'utr Rab35 FlyBase G69239.1 AGTTTTATTCGGAATAATGCCAGATAGCCGTAAATTAAAGT 13 20157237 0.808350991 3 12 73 0.941176471 1.204119983 0 0.230769231 0.411764706 13 1 0 16 X:20157214-20157254 7 Rab35 FBtr0303258|FBtr0333548|FBtr0333549|FBtr0070028 20157088|20157143|20155764|20156477 20157582|20157582|20157582|20157582 ATTCGGA 7mer-A1 dme-miR-995-5p X - 20157224 20157264 3'utr Rab35 FlyBase G52073.1 TTTCCTCCTCAGTTTTATTCGGAATAATGCCAGATAGCCGT 5 20157237 0.980659776 3 5 42 1 0.903089987 0 0.4 0.625 5 0 0 8 X:20157224-20157264 7 8.5 5794 FBgn0031090 1038.15 62.16666667 96 0.008187641 0.136729223 0.088541667 -11 -11 -11 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA X 20168120 20168126 - X_20168120_20168126_- 0.823349562 0.823349562 0.823349562 0 CG9581 FBtr0070026 20168040 20168150 X - 20168093 20168150 3'utr CG9581 FlyBase G69253.1 GAGCTCACAACGAAAACCAAATTCCTAGTCATAAGCCTTTCATTCTCCCGACAACCTT 29 20168129 0.96095212 4 28 138 0.945945946 1.544068044 0.216216216 0.275862069 0.432432432 29 2 0 35 X:20168093-20168150 7 CG9581 FBtr0070026 20168040 20168150 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X - 20168043 20168144 3'utr CG9581 FlyBase G52079.1 ACAACGAAAACCAAATTCCTAGTCATAAGCCTTTCATTCTCCCGACAACCTTATGAGCTGATTTGGGTCCTAAAGTAAAGGCAGATGCTGTATTTATAAATG 20 20168128 0.975116322 6 18 113 0.884615385 1.361727836 0.153846154 0.25 0.423076923 20 3 0 23 X:20168043-20168144 7 21.5 5795 FBgn0031093 169.6733333 10.98333333 16.82 0.126714078 1.957511381 1.27824019 3 2 2.5 0.01 dme-miR-305-3p 6mer2-7 TGTGCC X 20171524 20171529 - X_20171524_20171529_- 1 1 1 0 AnxB10 FBtr0070025|FBtr0301931 20171443|20171443 20171591|20171591 X - 20171468 20171552 3'utr AnxB10 FlyBase G69260.1 CGTGTTAATAGCTTTGATCGTAGTGTGCCTTTTAGGAAAATCGCTTTTAATGTCGTCTGCGCATGCGCACACTGTTGGCAATAAA 32 20171521 0.89442581 12 30 259 0.951219512 1.591064607 0.219512195 0.1875 0.365853659 32 2 0 39 X:20171468-20171552 6 AnxB10 FBtr0070025|FBtr0301931 20171443|20171443 20171591|20171591 TGTGCC 6mer2-7 dme-miR-305-3p X - 20171474 20171539 3'utr AnxB10 FlyBase G52084.1 TTGATCGTAGTGTGCCTTTTAGGAAAATCGCTTTTAATGTCGTCTGCGCATGCGCACACTGTTGGC 19 20171521 0.981546168 10 17 125 0.925925926 1.397940009 0.296296296 0.421052632 0.592592593 19 2 0 25 X:20171474-20171539 6 17 5796 FBgn0000084 609.39 60.31 92.3 0.027896749 0.281876969 0.184182015 -8 -8 -8 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 20182235 20182240 - X_20182235_20182240_- 1 1 1 0 Sdic2 FBtr0345925|FBtr0345925|FBtr0345925|FBtr0089610|FBtr0089610|FBtr0089610|FBtr0345926|FBtr0345926|FBtr0345926 20181741|20181741|20181741|20182036|20182036|20182036|20181588|20181588|20181588 20182337|20182337|20182337|20182337|20182337|20182337|20182337|20182337|20182337 X - 20182216 20182249 3'utr Sdic2 FlyBase G69266.1 TGTATCTTTTGTGATCCCGCTACTGTGTATAGCC 11 20182241 0.879786836 4 11 103 1 1.146128036 0.142857143 0.181818182 0.357142857 11 0 0 14 X:20182216-20182249 6 Sdic2 FBtr0345926|FBtr0345926|FBtr0345926|FBtr0089610|FBtr0089610|FBtr0089610|FBtr0345925|FBtr0345925|FBtr0345925 20181588|20181588|20181588|20182036|20182036|20182036|20181741|20181741|20181741 20182337|20182337|20182337|20182337|20182337|20182337|20182337|20182337|20182337 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 20182224 20182250 3'utr Sdic2 FlyBase G52087.1 TTGTATCTTTTGTGATCCCGCTACTGT 6 20182242 0.677388768 2 6 60 1 1.041392685 0.181818182 0.833333333 0.909090909 6 0 0 11 X:20182224-20182250 6 8.5 5797 FBgn0053497 6.756666667 0.41 0.633333333 1.258016774 20.73170732 13.42105263 1 2 1.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 20228616 20228621 - X_20228616_20228621_- 1 1 1 0 sw FBtr0089402|FBtr0089402|FBtr0089402|FBtr0340361|FBtr0340361|FBtr0340361|FBtr0089397|FBtr0089397|FBtr0089397|FBtr0089409|FBtr0089409|FBtr0089409|FBtr0089399|FBtr0089399|FBtr0089399|FBtr0089403|FBtr0089403|FBtr0089403|FBtr0089407|FBtr0089407|FBtr0089407|FBtr0089408|FBtr0089408|FBtr0089408|FBtr0089398|FBtr0089398|FBtr0089398|FBtr0089401|FBtr0089401|FBtr0089401|FBtr0089400|FBtr0089400|FBtr0089400|FBtr0089404|FBtr0089404|FBtr0089404|FBtr0089406|FBtr0089406|FBtr0089406|FBtr0340360|FBtr0340360|FBtr0340360|FBtr0089405|FBtr0089405|FBtr0089405 20227959|20227959|20227959|20227959|20227959|20227959|20228122|20228122|20228122|20228122|20228122|20228122|20227959|20227959|20227959|20227959|20227959|20227959|20228122|20228122|20228122|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20228122|20228122|20228122|20228122|20228122|20228122|20227959|20227959|20227959|20228122|20228122|20228122 20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718 X - 20228606 20228632 3'utr sw FlyBase G69279.1 TTTGTATCTTTTGTGATCCCGCTACTG 7 20228622 0.655741663 2 6 62 0.875 0.84509804 0.375 0.142857143 0.25 7 1 0 7 X:20228606-20228632 6 sw FBtr0089403|FBtr0089403|FBtr0089403|FBtr0089404|FBtr0089404|FBtr0089404|FBtr0089407|FBtr0089407|FBtr0089407|FBtr0340360|FBtr0340360|FBtr0340360|FBtr0089402|FBtr0089402|FBtr0089402|FBtr0340361|FBtr0340361|FBtr0340361|FBtr0089408|FBtr0089408|FBtr0089408|FBtr0089409|FBtr0089409|FBtr0089409|FBtr0089399|FBtr0089399|FBtr0089399|FBtr0089401|FBtr0089401|FBtr0089401|FBtr0089406|FBtr0089406|FBtr0089406|FBtr0089405|FBtr0089405|FBtr0089405|FBtr0089398|FBtr0089398|FBtr0089398|FBtr0089400|FBtr0089400|FBtr0089400|FBtr0089397|FBtr0089397|FBtr0089397 20227959|20227959|20227959|20228122|20228122|20228122|20228122|20228122|20228122|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20228122|20228122|20228122|20227959|20227959|20227959|20227959|20227959|20227959|20228122|20228122|20228122|20228122|20228122|20228122|20227959|20227959|20227959|20227959|20227959|20227959|20228122|20228122|20228122 20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 20228608 20228632 3'utr sw FlyBase G52093.1 TTTGTATCTTTTGTGATCCCGCTAC 7 20228622 0.694488948 2 6 61 0.9 0.954242509 0.2 0.285714286 0.5 7 1 0 9 X:20228608-20228632 6 7 5798 FBgn0003654 899.0166667 37.47 57.48333333 0.007786285 0.18681612 0.121774427 1 1 1 0.01 dme-miR-33-5p 6mer2-7 AATGCA X 2023105 2023110 + X_2023105_2023110_+ 1 1 1 0 east FBtr0307290 2022463 2024647 X + 2023082 2023135 3'utr east FlyBase G58174.1 ACACACAAAGTAATTTAAGAGAGAATGCAGCACAAAAAAATTGAGGCCAAGATT 17 2023107 0.933858758 3 16 38 0.947368421 1.255272505 0.052631579 0.117647059 0.210526316 17 1 0 18 X:2023082-2023135 6 east FBtr0307290 2022463 2024647 AATGCA 6mer2-7 dme-miR-33-5p X + 2023086 2023122 3'utr east FlyBase G44003.1 ACAAAGTAATTTAAGAGAGAATGCAGCACAAAAAAAT 9 2023107 0.894543098 3 9 25 1 1.204119983 0 0.555555556 0.75 9 0 0 16 X:2023086-2023122 6 13 5799 FBgn0261954 4706.666667 61.14 94.46 0.00276204 0.212626758 0.137624391 -2 -2 -2 0.01 dme-miR-1003-3p 6mer2-7 TGTGAG X 2023537 2023542 + X_2023537_2023542_+ 1 1 1 0 east FBtr0307290 2022463 2024647 X + 2023518 2023609 3'utr east FlyBase G58176.1 GCTTAAGAAGAAACGCGATTGTGAGCCACAAGCAATCAAATTGATCGATGTTCTCGGTGCCTCTGGTGGCCTATGTTCCATTCCAAGGAATT 20 2023566 0.976971292 8 20 130 1 1.397940009 0.28 0.25 0.4 20 0 0 25 X:2023518-2023609 6 east FBtr0307290 2022463 2024647 TGTGAG 6mer2-7 dme-miR-1003-3p X + 2023522 2023588 3'utr east FlyBase G44005.1 AAGAAGAAACGCGATTGTGAGCCACAAGCAATCAAATTGATCGATGTTCTCGGTGCCTCTGGTGGCC 15 2023566 0.981676713 6 13 91 0.931034483 1.431363764 0.310344828 0.466666667 0.724137931 15 2 0 27 X:2023522-2023588 6 4 5800 FBgn0261954 4706.666667 61.14 94.46 0.000849858 0.065423618 0.042345967 -29 -29 -29 0.01 dme-miR-14-3p 6mer3-8 AAGACT X 20248355 20248360 - X_20248355_20248360_- 1 1 1 0 CG17068 FBtr0077341 20248307 20248868 X - 20248345 20248371 3'utr CG17068 FlyBase G69281.1 AAGATTTACACAAGACTAAATTGGTAT 13 20248366 0.585355024 4 13 69 1 1.230448921 0.058823529 0.307692308 0.470588235 13 0 0 17 X:20248345-20248371 6 CG17068 FBtr0077341 20248307 20248868 AAGACT 6mer3-8 dme-miR-14-3p X - 20248341 20248376 3'utr CG17068 FlyBase G52095.1 ATTTTAAGATTTACACAAGACTAAATTGGTATATTT 9 20248367 0.766538447 3 8 54 0.916666667 1.041392685 0.083333333 0.222222222 0.416666667 9 1 0 11 X:20248341-20248376 6 11 5801 FBgn0031098 134.3766667 5.846666667 8.906666667 0.08185945 1.881413911 1.23502994 6 7 6.5 0.01 dme-miR-932-5p 6mer2-7 GAATTG X 20253372 20253377 + X_20253372_20253377_+ 1 1 1 0 Rab10 FBtr0077337 20253262 20254691 X + 20253340 20253372 3'utr Rab10 FlyBase G63214.1 ACGGATTGGATTGGATTAAACTGGACTAGATTG 10 20253361 0.933109854 3 9 58 0.928571429 1.113943352 0.571428571 0.3 0.5 10 1 0 13 X:20253340-20253372 1 Rab10 FBtr0077337 20253262 20254691 GAATTG 6mer2-7 dme-miR-932-5p X + 20253297 20253375 3'utr Rab10 FlyBase G47666.1 GGCCCGGTTTGTGCTCAGCTGTGCGTGGGGAAGGCGGCGAAGTACGGATTGGATTGGATTAAACTGGACTAGATTGAAT 12 20253361 0.975644537 4 11 80 1 1.301029996 0.3 0.416666667 0.65 12 0 0 20 X:20253297-20253375 4 5.5 5802 FBgn0015789 1230.126667 63.84666667 97.75 0.004471084 0.086143886 0.056265985 11 11 11 0.01 dme-miR-980-5p 7mer-A1 AAAAACA X 20253455 20253461 + X_20253455_20253461_+ 0.782911824 0.782911824 0.782911824 0 Rab10 FBtr0077337 20253262 20254691 X + 20253432 20253486 3'utr Rab10 FlyBase G63215.1 AACCGCTCCGCACGGACGAAGCAAAAAACAAAGCAATAGAGCCGGGGTCATTCGC 5 20253468 0.920079163 3 4 11 1 0.698970004 0 0 0 5 0 0 5 X:20253432-20253486 7 Rab10 FBtr0077337 20253262 20254691 AAAAACA 7mer-A1 dme-miR-980-5p X + 20253455 20253498 3'utr Rab10 FlyBase G47667.1 AAAAACAAAGCAATAGAGCCGGGGTCATTCGCACGTAGGAAACT 8 20253468 0.946359593 2 7 23 1 1.113943352 0.307692308 0.5 0.692307692 8 0 0 13 X:20253455-20253498 6 3 5803 FBgn0015789 1230.126667 63.84666667 97.75 0.002438773 0.046987574 0.030690537 -13 -13 -13 0.01 dme-miR-184-3p 6mer3-8 TCCGTC X 2025349 2025354 - X_2025349_2025354_- 1 1 1 0 Actn FBtr0070343|FBtr0310659|FBtr0310657|FBtr0070345|FBtr0070344|FBtr0310658|FBtr0333802|FBtr0333801|FBtr0303048 2025114|2025114|2024754|2023820|2025114|2025114|2025114|2025114|2025114 2025540|2025540|2025540|2025540|2025540|2025540|2025540|2025540|2025540 X - 2025316 2025364 3'utr Actn FlyBase G64175.1 TTTATTAATTTCCGTCTCGAGCCGATGTATGCGACCCACACATACAAAA 9 2025355 0.98348232 3 9 72 1 0.954242509 0 0 0 9 0 0 9 X:2025316-2025364 6 Actn FBtr0310658|FBtr0333802|FBtr0333801|FBtr0303048|FBtr0070343|FBtr0310657|FBtr0310659|FBtr0070345|FBtr0070344 2025114|2025114|2025114|2025114|2025114|2024754|2025114|2023820|2025114 2025540|2025540|2025540|2025540|2025540|2025540|2025540|2025540|2025540 TCCGTC 6mer3-8 dme-miR-184-3p X - 2025336 2025363 3'utr Actn FlyBase G48376.1 TTATTAATTTCCGTCTCGAGCCGATGTA 9 2025355 0.706860117 2 9 67 1 1.113943352 0 0.222222222 0.461538462 9 0 0 13 X:2025336-2025363 6 9 5804 FBgn0000667 602.5766667 20.25333333 31.07 0.014935859 0.444371297 0.289668491 1 1 1 0.01 dme-miR-79-3p 6mer3-8 TAGCTT X 20254015 20254020 + X_20254015_20254020_+ 1 1 1 0 Rab10 FBtr0077337 20253262 20254691 X + 20253901 20254037 3'utr Rab10 FlyBase G63216.1 GCACTCCCCAGCCGCCCCACTTAGTGTTTCGTTTTTGTTTTGCGTTTCAGCCTAGATATAAATAACACCTATACATATTATACATCGGATAGTAGTATATAGCCTATACCTACTTAGCTTGCTTTCGCTTTCTATGT 27 20254014 0.989341826 14 26 254 0.96875 1.491361694 0.1875 0.185185185 0.3125 27 1 0 31 X:20253901-20254037 6 Rab10 FBtr0077337 20253262 20254691 TAGCTT 6mer3-8 dme-miR-79-3p X + 20254000 20254033 3'utr Rab10 FlyBase G47668.1 TAGCCTATACCTACTTAGCTTGCTTTCGCTTTCT 7 20254014 0.72095455 4 6 59 0.866666667 1.113943352 0 0.571428571 0.8 7 2 0 13 X:20254000-20254033 6 8 5805 FBgn0015789 1230.126667 63.84666667 97.75 0.006503395 0.125300198 0.081841432 1 1 1 0.01 dme-miR-317-3p 6mer2-7 GTGTTC X 20254174 20254179 + X_20254174_20254179_+ 1 0.805284719 0.902642359 0.137684509 Rab10 FBtr0077337 20253262 20254691 X + 20254050 20254231 3'utr Rab10 FlyBase G63217.1 AAGCCAGCGAGGAGTTCGATGGGGCGGGTGGTGATGTACGCCCTGCTCTGCGTCCTGGCCACTCAAGCTTTCAAGCCAGATCCTCGGCCAGAGTTGCAGTTCCATAGGGAGTTTCGAGATCGAGGTGTTCCGAAATCGTTTTTGATTATTGCCTGTGCATATATATATATATATATATATAT 37 20254144 0.992465042 18 33 376 0.911111111 1.612783857 0.133333333 0.189189189 0.333333333 37 4 0 41 X:20254050-20254231 6 Rab10 FBtr0077337 20253262 20254691 GTGTTC 6mer2-7 dme-miR-317-3p X + 20254097 20254176 3'utr Rab10 FlyBase G47669.1 CTGCGTCCTGGCCACTCAAGCTTTCAAGCCAGATCCTCGGCCAGAGTTGCAGTTCCATAGGGAGTTTCGAGATCGAGGTG 16 20254144 0.9776801 8 13 87 0.88 1.041392685 0.24 0.25 0.52 16 2 1 22 X:20254097-20254176 3 4.5 5806 FBgn0015789 1230.126667 63.84666667 97.75 0.00365816 0.070481362 0.046035806 30 30 30 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 20254640 20254645 + X_20254640_20254645_+ 1 1 1 0 Rab10 FBtr0077337 20253262 20254691 X + 20254589 20254665 3'utr Rab10 FlyBase G63220.1 CGTGTAAACCTATTATTTGTAACTGTATATGGATTTAGTTTAGTTGTCCACACCAAATGATTTACCGATTAAAATAT 15 20254650 0.982127404 7 15 112 1 1.204119983 0.125 0.066666667 0.125 15 0 0 16 X:20254589-20254665 6 Rab10 FBtr0077337 20253262 20254691 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 20254603 20254653 3'utr Rab10 FlyBase G47673.1 ATTTGTAACTGTATATGGATTTAGTTTAGTTGTCCACACCAAATGATTTAC 8 20254622 0.778139045 5 8 73 1 1.113943352 0 0.5 0.692307692 8 0 0 13 X:20254603-20254653 6 9 5807 FBgn0015789 1230.126667 63.84666667 97.75 0.00731632 0.140962723 0.092071611 -10 18 4 0.01 dme-bantam-3p 6mer3-8 TGATCT X 2039002 2039007 - X_2039002_2039007_- 1 1 1 0 usp FBtr0070346|FBtr0333803 2038796|2038796 2039386|2039386 X - 2038981 2039033 5'utr usp FlyBase G64186.1 TAACGGTTAAAATTAATGCATAGTTATGATCTACAGACGTATGTAAACATACA 85 2039007 0.722550715 5 80 571 0.923809524 1.986771734 0.19047619 0.188235294 0.342857143 85 8 0 97 X:2038981-2039033 6 usp FBtr0070346|FBtr0333803 2038796|2038796 2039386|2039386 TGATCT 6mer3-8 dme-bantam-3p X - 2038982 2039029 5'utr usp FlyBase G48383.1 GGTTAAAATTAATGCATAGTTATGATCTACAGACGTATGTAAACATAC 44 2039007 0.707469333 4 42 273 0.971428571 1.832508913 0.357142857 0.340909091 0.585714286 44 2 0 68 X:2038982-2039029 6 63.5 5808 FBgn0003964 1386.533333 66.48333333 101.85 0.045797673 0.955126598 0.623465881 0 0 0 0.01 dme-miR-2b-2-5p 6mer2-7 TGAAGA X 2039181 2039186 - X_2039181_2039186_- 1 1 1 0 usp FBtr0070346|FBtr0333803 2038796|2038796 2039386|2039386 X - 2039153 2039235 5'utr usp FlyBase G64187.1 TTACCTAATATTATTATTATTATTGATATAGAAAATGTTTTCCTTAAGATGAAGATTAGCCTCCTCGACGTTTATGTCCCAGT 17 2039179 0.978331753 6 16 117 0.95 1.278753601 0.3 0.176470588 0.3 17 1 0 19 X:2039153-2039235 6 usp FBtr0070346|FBtr0333803 2038796|2038796 2039386|2039386 TGAAGA 6mer2-7 dme-miR-2b-2-5p X - 2039146 2039190 5'utr usp FlyBase G48384.1 AAGATGAAGATTAGCCTCCTCGACGTTTATGTCCCAGTAAACGAA 16 2039180 0.977783701 3 14 78 0.961538462 1.397940009 0.153846154 0.25 0.538461538 16 1 0 25 X:2039146-2039190 6 14.5 5809 FBgn0003964 1386.533333 66.48333333 101.85 0.010457736 0.218099774 0.142366225 -7 -6 -6.5 0.01 dme-miR-308-3p 7mer-m1 TGTGATT X 2039331 2039337 - X_2039331_2039337_- 0.521223855 0.521223855 0.521223855 0 usp FBtr0070346|FBtr0333803 2038796|2038796 2039386|2039386 X - 2039291 2039360 5'utr usp FlyBase G64188.1 TCTCCATCCGAAAAATGTTTCATTGTGATTGCGTTTGTTTGCATTTCTCCTCTCTATCCCTTATACCCTA 295 2039338 0.629756868 17 277 3251 0.938172043 1.542825427 0.206989247 0.210169492 0.373655914 295 14 9 349 X:2039291-2039360 7 usp FBtr0070346|FBtr0333803 2038796|2038796 2039386|2039386 TGTGATT 7mer-m1 dme-miR-308-3p X - 2039295 2039356 5'utr usp FlyBase G48385.1 CATCCGAAAAATGTTTCATTGTGATTGCGTTTGTTTGCATTTCTCCTCTCTATCCCTTATAC 199 2039332 0.691215852 11 191 2120 0.969798658 1.682746592 0.241610738 0.346733668 0.563758389 199 4 5 289 X:2039295-2039356 7 210.5 5810 FBgn0003964 1386.533333 66.48333333 101.85 0.151817482 3.166207069 2.06676485 1 -5 -2 0.01 dme-miR-283-5p 6mer3-8 TGATAT X 20421139 20421144 - X_20421139_20421144_- 1 0.992365248 0.996182624 0.005398619 Pp4-19C FBtr0346620|FBtr0077324|FBtr0345017|FBtr0340403|FBtr0077325 20421085|20421085|20421085|20421085|20421085 20421864|20421864|20421864|20421864|20421864 X - 20421092 20421161 3'utr Pp4-19C FlyBase G69290.1 TGCCCCAGATTGGGAGATGATATACAAAAAAATGTACTTGTATTTATAATAATAAAGATTGTAATATAAT 10 20421152 0.972341771 6 10 62 1 1.041392685 0.181818182 0.1 0.181818182 10 0 0 11 X:20421092-20421161 6 Pp4-19C FBtr0340403|FBtr0345017|FBtr0077324|FBtr0346620|FBtr0077325 20421085|20421085|20421085|20421085|20421085 20421864|20421864|20421864|20421864|20421864 TGATAT 6mer3-8 dme-miR-283-5p X - 20421109 20421167 3'utr Pp4-19C FlyBase G52102.1 TAAATATGCCCCAGATTGGGAGATGATATACAAAAAAATGTACTTGTATTTATAATAAT 9 20421152 0.976824464 5 9 59 1 1.113943352 0 0.444444444 0.615384615 9 0 0 13 X:20421109-20421167 6 5 5811 FBgn0023177 682.52 42.84666667 65.32666667 0.007325793 0.116695192 0.076538422 8 8 8 0.01 dme-miR-283-5p 7mer-m1 GATATTT X 20421328 20421334 - X_20421328_20421334_- 0.765586663 0.765586663 0.765586663 0 Pp4-19C FBtr0346620|FBtr0077324|FBtr0345017|FBtr0340403|FBtr0077325 20421085|20421085|20421085|20421085|20421085 20421864|20421864|20421864|20421864|20421864 X - 20421290 20421359 3'utr Pp4-19C FlyBase G69291.1 ACTAGGAGCCCAAGTTGAGCAAATAGATATTTTTACCGACAGATTGCGTTAAGTCGGCTAAGCTAGGACA 11 20421345 0.97456021 5 10 63 0.916666667 1.041392685 0.25 0.090909091 0.166666667 11 1 0 11 X:20421290-20421359 7 Pp4-19C FBtr0340403|FBtr0345017|FBtr0077324|FBtr0346620|FBtr0077325 20421085|20421085|20421085|20421085|20421085 20421864|20421864|20421864|20421864|20421864 GATATTT 7mer-m1 dme-miR-283-5p X - 20421300 20421362 3'utr Pp4-19C FlyBase G52103.1 TATACTAGGAGCCCAAGTTGAGCAAATAGATATTTTTACCGACAGATTGCGTTAAGTCGGCTA 15 20421345 0.977233831 6 13 88 0.916666667 1.342422681 0.125 0.466666667 0.666666667 15 2 0 22 X:20421300-20421362 7 8 5812 FBgn0023177 682.52 42.84666667 65.32666667 0.011721268 0.186712307 0.122461476 11 11 11 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA X 20426559 20426566 - X_20426559_20426566_- 0.650171355 0.650171289 0.650171322 7.07E-08 CG15456 FBtr0077323|FBtr0077323|FBtr0077323 20426507|20426507|20426507 20426645|20426645|20426645 X - 20426541 20426608 3'utr CG15456 FlyBase G69304.1 GCTTCACGCTTACACCAACATTTGTGGAACCCATTTGAAATCCTGTGATATATGGTATATACATATAT 39 20426568 0.815469078 8 34 326 0.88372093 1.102662342 0.186046512 0.102564103 0.186046512 39 3 2 38 X:20426541-20426608 8 CG15456 FBtr0077323|FBtr0077323|FBtr0077323 20426507|20426507|20426507 20426645|20426645|20426645 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 20426531 20426602 3'utr CG15456 FlyBase G52110.1 CGCTTACACCAACATTTGTGGAACCCATTTGAAATCCTGTGATATATGGTATATACATATATAATAATAAAT 24 20426568 0.964384997 10 23 201 1 1.568201724 0.162162162 0.333333333 0.567567568 24 0 0 37 X:20426531-20426602 8 27 5813 FBgn0040650 15.33333333 4.38 6.593333333 1.760869565 6.164383562 4.095045501 2 2 2 0.01 dme-miR-14-3p 6mer2-7 AGACTG X 20426622 20426627 - X_20426622_20426627_- 0.999888998 1 0.999944499 7.85E-05 CG15456 FBtr0077323 20426507 20426645 X - 20426615 20426665 stop_codon CG15456 FlyBase G69305.1 AGGACTGCGTCGTGATGTGATCTCCTACTTTCACGCCTAGACTGTTTAAAC 24 20426636 0.780972529 9 24 179 1 1.462397998 0.206896552 0.166666667 0.310344828 24 0 0 29 X:20426615-20426665 6 CG15456 FBtr0077323 20426507 20426645 AGACTG 6mer2-7 dme-miR-14-3p X - 20426614 20426666 stop_codon CG15456 FlyBase G52111.1 AAGGACTGCGTCGTGATGTGATCTCCTACTTTCACGCCTAGACTGTTTAAACA 11 20426636 0.770090259 4 10 88 0.941176471 0.903089987 0.352941176 0.363636364 0.588235294 11 0 1 16 X:20426614-20426666 6 5.5 5814 FBgn0040650 15.33333333 4.38 6.593333333 0.358695652 1.255707763 0.834175935 9 9 9 0.01 dme-miR-965-3p 7mer-A1 ACGCTTA X 2044559 2044565 - X_2044559_2044565_- 0.823349562 0.823349562 0.823349562 0 moody FBtr0310289|FBtr0303044|FBtr0303045|FBtr0303043|FBtr0070341|FBtr0310288 2044290|2044290|2044290|2044290|2044290|2044290 2045134|2045243|2045243|2045134|2045134|2045134 X - 2044517 2044622 3'utr moody FlyBase G64199.1 CATACACATGTTACACTACTTAGTAATAGTTTAGTTCGTAAATATTTATGGTCGCTCACGCTTAGTATTAACCCCTTTTCTTTCTACCTTATATGCTAACTTCTAC 32 2044574 0.984574742 8 29 330 0.897435897 1.544068044 0.076923077 0.1875 0.333333333 32 4 0 35 X:2044517-2044622 7 moody FBtr0310288|FBtr0070341|FBtr0303043|FBtr0303045|FBtr0303044|FBtr0310289 2044290|2044290|2044290|2044290|2044290|2044290 2045134|2045134|2045134|2045243|2045243|2045134 ACGCTTA 7mer-A1 dme-miR-965-3p X - 2044544 2044620 3'utr moody FlyBase G48395.1 TACACATGTTACACTACTTAGTAATAGTTTAGTTCGTAAATATTTATGGTCGCTCACGCTTAGTATTAACCCCTTTT 16 2044574 0.989067906 8 16 150 1 1.301029996 0.05 0.1875 0.35 16 0 0 20 X:2044544-2044620 7 13 5815 FBgn0025631 754.5733333 24.87333333 38.48333333 0.017228279 0.522648084 0.337808575 9 9 9 0.01 dme-miR-970-3p 6mer3-8 TCTTAT X 2044677 2044682 - X_2044677_2044682_- 1 1 1 0 moody FBtr0310289|FBtr0303044|FBtr0303045|FBtr0303043|FBtr0070341|FBtr0310288 2044290|2044290|2044290|2044290|2044290|2044290 2045134|2045243|2045243|2045134|2045134|2045134 X - 2044627 2044718 3'utr moody FlyBase G64200.1 TACTTTTGAGTGCCCCTCTACTTTTCGCCCTAATATTCTTATTCCGCCCTATATTGCATAAGCCTAAGCCTGGATTTTTAATAAGCCCCCAA 210 2044677 0.980373074 18 199 2026 0.951612903 2.071882007 0.032258065 0.166666667 0.294354839 210 11 1 236 X:2044627-2044718 6 moody FBtr0310288|FBtr0070341|FBtr0303043|FBtr0303045|FBtr0303044|FBtr0310289 2044290|2044290|2044290|2044290|2044290|2044290 2045134|2045134|2045134|2045243|2045243|2045134 TCTTAT 6mer3-8 dme-miR-970-3p X - 2044637 2044716 3'utr moody FlyBase G48396.1 CTTTTGAGTGCCCCTCTACTTTTCGCCCTAATATTCTTATTCCGCCCTATATTGCATAAGCCTAAGCCTGGATTTTTAAT 84 2044677 0.829919569 11 79 737 0.944 1.770852012 0.008 0.345238095 0.56 84 6 1 118 X:2044637-2044716 6 129.5 5816 FBgn0025631 754.5733333 24.87333333 38.48333333 0.171620165 5.206378987 3.365093114 -5 -5 -5 0.01 dme-miR-932-5p 7mer-m8 GGAATTG X 2045050 2045056 - X_2045050_2045056_- 0.70297287 0.70297287 0.70297287 0 moody FBtr0310289|FBtr0303044|FBtr0303045|FBtr0303043|FBtr0070341|FBtr0310288 2044290|2044290|2044290|2044290|2044290|2044290 2045134|2045243|2045243|2045134|2045134|2045134 X - 2045035 2045077 3'utr moody FlyBase G64202.1 GTTATGAACACAAAATTGCCAGGAATTGTAGATCGGGATATAG 48 2045062 0.836356185 4 44 225 0.929824561 1.72427587 0.157894737 0.145833333 0.280701754 48 4 0 53 X:2045035-2045077 7 moody FBtr0310288|FBtr0070341|FBtr0303043|FBtr0303045|FBtr0303044|FBtr0310289 2044290|2044290|2044290|2044290|2044290|2044290 2045134|2045134|2045134|2045243|2045243|2045134 GGAATTG 7mer-m8 dme-miR-932-5p X - 2045041 2045087 3'utr moody FlyBase G48398.1 TGCTACCTTCGTTATGAACACAAAATTGCCAGGAATTGTAGATCGGG 34 2045062 0.790474676 5 32 155 0.914893617 1.633468456 0.085106383 0.323529412 0.510638298 34 4 0 43 X:2045041-2045087 7 39 5817 FBgn0025631 754.5733333 24.87333333 38.48333333 0.051684837 1.567944251 1.013425725 6 6 6 0.01 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT X 20470493 20470499 - X_20470493_20470499_- 0.620204031 0.620204031 0.620204031 0 RhoGAP19D FBtr0304906|FBtr0301537|FBtr0340405|FBtr0345015 20469953|20469953|20469953|20469953 20472033|20472033|20472033|20472033 X - 20470483 20470510 3'utr RhoGAP19D FlyBase G69309.1 TATTTGGAGAATGGTGCTGGCGGAAATG 13 20470499 0.818407676 3 12 53 1 1.176091259 0.066666667 0.153846154 0.266666667 13 0 0 15 X:20470483-20470510 7 RhoGAP19D FBtr0345015|FBtr0340405|FBtr0301537|FBtr0304906 20469953|20469953|20469953|20469953 20472033|20472033|20472033|20472033 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" X - 20470456 20470518 3'utr RhoGAP19D FlyBase G52113.1 GTATTATTTATTTGGAGAATGGTGCTGGCGGAAATGCATGATATAGGTGCAGCTACAAAGCTA 9 20470499 0.962620947 5 9 50 1 1.113943352 0.153846154 0.333333333 0.538461538 9 0 0 13 X:20470456-20470518 7 9.5 5818 FBgn0031118 1322.826667 17.35333333 26.62 0.007181591 0.547445255 0.35687453 0 0 0 0.01 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG X 20470644 20470650 - X_20470644_20470650_- 0.70297214 0.70297214 0.70297214 0 RhoGAP19D FBtr0304906|FBtr0301537|FBtr0340405|FBtr0345015 20469953|20469953|20469953|20469953 20472033|20472033|20472033|20472033 X - 20470633 20470673 3'utr RhoGAP19D FlyBase G69311.1 TTTCTTTTCTTCTTTGTACCTCTGTACCTGTTGTACAAAAA 31 20470651 0.802699252 4 31 287 1 1.62324929 0.285714286 0.193548387 0.404761905 31 0 0 42 X:20470633-20470673 7 RhoGAP19D FBtr0345015|FBtr0340405|FBtr0301537|FBtr0304906 20469953|20469953|20469953|20469953 20472033|20472033|20472033|20472033 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" X - 20470635 20470662 3'utr RhoGAP19D FlyBase G52114.1 CTTTGTACCTCTGTACCTGTTGTACAAA 18 20470651 0.786797628 2 18 142 1 1.342422681 0.227272727 0.222222222 0.363636364 18 0 0 22 X:20470635-20470662 7 24.5 5819 FBgn0031118 1322.826667 17.35333333 26.62 0.018520945 1.411832501 0.920360631 1 1 1 0.01 dme-miR-11-3p 7mer-m1 TGTGATG X 20514947 20514953 + X_20514947_20514953_+ 0.612071121 0.612071121 0.612071121 0 CG1812 FBtr0077312 20514813 20515828 X + 20514910 20514975 3'utr CG1812 FlyBase G63274.1 TGTGTAGCTAGCGTAGACCTATGTACATGCGAGATTTTGTGATGACTGCAGTAACGAAAATGTGCC 28 20514946 0.981450366 8 26 186 0.945945946 1.243038049 0.297297297 0.214285714 0.405405405 28 1 1 35 X:20514910-20514975 7 CG1812 FBtr0077312 20514813 20515828 TGTGATG 7mer-m1 dme-miR-11-3p X + 20514911 20514965 3'utr CG1812 FlyBase G47706.1 GTGTAGCTAGCGTAGACCTATGTACATGCGAGATTTTGTGATGACTGCAGTAACG 18 20514946 0.980803042 6 18 128 1 1.380211242 0.458333333 0.222222222 0.416666667 18 0 0 24 X:20514911-20514965 7 19.5 5820 FBgn0031119 225 8.363333333 12.75 0.086666667 2.331606218 1.529411765 1 1 1 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA X 20515531 20515538 + X_20515531_20515538_+ 0.500120318 0.500120318 0.500120318 0 CG1812 FBtr0077312 20514813 20515828 X + 20515506 20515560 3'utr CG1812 FlyBase G63277.1 ATAGAGTGTAAAATATGTAGAACATGTACTTAATTTGTATAAACTAGAAAAAGTT 57 20515530 0.895044842 5 56 521 0.984615385 1.806179974 0.246153846 0.122807018 0.230769231 57 1 0 64 X:20515506-20515560 8 CG1812 FBtr0077312 20514813 20515828 GTACTTAA 8mer-A1 dme-miR-252-5p X + 20515509 20515556 3'utr CG1812 FlyBase G47708.1 GAGTGTAAAATATGTAGAACATGTACTTAATTTGTATAAACTAGAAAA 47 20515530 0.886382602 4 47 406 1 1.84509804 0.157142857 0.382978723 0.585714286 47 0 0 70 X:20515509-20515556 8 51.5 5821 FBgn0031119 225 8.363333333 12.75 0.228888889 6.157831806 4.039215686 1 1 1 0.01 dme-miR-986-5p 6mer2-7 TTCGAG X 20515965 20515970 - X_20515965_20515970_- 1 1 1 0 Tak1 FBtr0077319|FBtr0340404 20515906|20515906 20516300|20516300 X - 20515922 20515998 3'utr Tak1 FlyBase G69331.1 ACACACTTAGCATTAGCACATGTATCTGTTCGAGGAAGCTGACAAGGAGTAGACCAAAAAAATATAAAAACCATCGA 77 20515978 0.983729794 9 77 590 1 1.963787827 0.043478261 0.181818182 0.315217391 77 0 0 92 X:20515922-20515998 6 Tak1 FBtr0077319|FBtr0340404 20515906|20515906 20516300|20516300 TTCGAG 6mer2-7 dme-miR-986-5p X - 20515928 20516000 3'utr Tak1 FlyBase G52125.1 AAACACACTTAGCATTAGCACATGTATCTGTTCGAGGAAGCTGACAAGGAGTAGACCAAAAAAATATAAAAAC 53 20515978 0.982303798 6 53 396 1 1.892094603 0.076923077 0.377358491 0.576923077 53 0 0 78 X:20515928-20516000 6 61.5 5822 FBgn0026323 737.6966667 30.11333333 45.87333333 0.083367599 2.042284702 1.340648162 8 8 8 0.01 dme-miR-970-3p 6mer3-8 TCTTAT X 20516257 20516262 - X_20516257_20516262_- 1 0.999999342 0.999999671 4.95E-07 Tak1 FBtr0077319|FBtr0340404 20515906|20515906 20516300|20516300 X - 20516244 20516309 stop_codon Tak1 FlyBase G69333.1 AATGCGTAGTCTCGTGCGCTGCCGATTCGATCGATCGACTCTCTATGTCTTATAGGCTAGTACTCT 9 20516260 0.758871517 9 9 72 1 1 0.4 0.111111111 0.2 9 0 0 10 X:20516244-20516309 6 Tak1 FBtr0077319|FBtr0340404 20515906|20515906 20516300|20516300 TCTTAT 6mer3-8 dme-miR-970-3p X - 20516243 20516307 stop_codon Tak1 FlyBase G52127.1 TGCGTAGTCTCGTGCGCTGCCGATTCGATCGATCGACTCTCTATGTCTTATAGGCTAGTACTCTA 11 20516290 0.810567704 6 10 83 0.875 1.322219295 0.333333333 0.727272727 0.875 11 3 0 21 X:20516243-20516307 6 5 5823 FBgn0026323 737.6966667 30.11333333 45.87333333 0.006777854 0.166039407 0.108995785 -2 28 13 0.01 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 2055118 2055125 + X_2055118_2055125_+ 0.63113665 0.63113665 0.63113665 0 CG4313 FBtr0340109|FBtr0340108|FBtr0340107 2054944|2054944|2054944 2055414|2055414|2055414 X + 2055099 2055148 3'utr CG4313 FlyBase G58179.1 AGTGCCTCCAAAAAAGATTTCTAGTCACATGATCCGGCCGGTCGTCCCTT 14 2055117 0.976627208 4 13 87 0.882352941 1.176091259 0.235294118 0.142857143 0.294117647 14 2 0 15 X:2055099-2055148 8 CG4313 FBtr0340107|FBtr0340109|FBtr0340108 2054944|2054944|2054944 2055414|2055414|2055414 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X + 2055097 2055132 3'utr CG4313 FlyBase G44006.1 ATAGTGCCTCCAAAAAAGATTTCTAGTCACATGATC 8 2055117 0.978349085 2 6 35 0.777777778 0.84509804 0.222222222 0.125 0.222222222 8 2 0 7 X:2055097-2055132 8 9.5 5824 FBgn0025632 50.11333333 3.046666667 4.636666667 0.189570307 3.118161926 2.048885694 1 1 1 0.01 dme-miR-79-3p 6mer3-8 TAGCTT X 2062590 2062595 - X_2062590_2062595_- 1 0.999999993 0.999999996 0 CG4281 FBtr0070339 2062311 2062734 X - 2062557 2062614 3'utr CG4281 FlyBase G64210.2 CTTAATCTATGAATGCTTTTAGCTTGTTTTTGTGAAATCTGTTCCATGTACATAAGTT 20 2062586 0.550800315 11 19 220 0.961538462 1.397940009 0.230769231 0.3 0.461538462 20 1 0 25 X:2062557-2062614 6 CG4281 FBtr0070339 2062311 2062734 TAGCTT 6mer3-8 dme-miR-79-3p X - 2062511 2062614 3'utr CG4281 FlyBase G48404.1 CTTAATCTATGAATGCTTTTAGCTTGTTTTTGTGAAATCTGTTCCATGTACATAAGTTGCATCGGTCCGTGTATATACTAACTGACTTCGTTAGGGAATGGCGC 20 2062588 0.98476381 13 19 155 0.958333333 1.361727836 0.291666667 0.1 0.25 20 1 0 23 X:2062511-2062614 6 9 5825 FBgn0025626 911.3433333 41.56 63.71666667 0.009875532 0.216554379 0.141250327 -9 -7 -8 0.01 dme-miR-317-3p 6mer3-8 TGTGTT X 2092105 2092110 + X_2092105_2092110_+ 1 1 1 0 Unc-76 FBtr0333754 2092043 2093948 X + 2091935 2092336 stop_codon Unc-76 FlyBase G58210.1 ATGCCGACTCCTCCCGATCTCTTGCAGTTCTCAAGGCCATCAACGAGGACAGCCCGACGGTTCCGGCCCTCCTTACGGACTACATCCTGAAGGTGCTCTGCCCTACATAAGCGCCGCAAGCGGTAGTCGCCGAGGAGCAGGAACCCCAGCTGTCGCTCCATCTCTCTGTCTGTGTTTATACAATTATACAACTTGCATATACACACCGAACACACCACACATAATTTAATGATTAGTTCGTACTTTAAATTATTGTTTAAATGCAATCCGTGTACTCTCCGCGGAGAAGAAGATTTGCCGCATAAAGAGAGGACTCTAGTGATTCGTCTGTCGAATATGAGGCACCCAAAGTGGGGTCTTCTTCTCAACGGAGTGCTTTTCCCGGCCGATTCGACCGACAGA 378 2092104 0.940995212 58 320 2783 0.852173913 1.116164812 0.130434783 0.19047619 0.334782609 378 39 29 392 X:2091935-2092336 6 Unc-76 FBtr0070376|FBtr0333755|FBtr0333754|FBtr0070377 2092043|2092043|2092043|2092043 2093093|2093093|2093948|2093093 TGTGTT 6mer3-8 dme-miR-317-3p X + 2092104 2092407 3'utr Unc-76 FlyBase G44029.2 CTGTGTTTATACAATTATACAACTTGCATATACACACCGAACACACCACACATAATTTAATGATTAGTTCGTACTTTAAATTATTGTTTAAATGCAATCCGTGTACTCTCCGCGGAGAAGAAGATTTGCCGCATAAAGAGAGGACTCTAGTGATTCGTCTGTCGAATATGAGGCACCCAAAGTGGGGTCTTCTTCTCAACGGAGTGCTTTTCCCGGCCGATTCGACCGACAGAACAAAATATGCAACAAAACATACATGCAATACACATACATATATAGACACATATATATATATATAAACCGA 168 2092104 0.987002748 43 110 987 0.816326531 1 0.171428571 0.351190476 0.555102041 168 26 19 200 X:2092104-2092407 6 107.5 5826 FBgn0040395 2008.98 81.18333333 124.25 0.053509741 1.324163416 0.865191147 1 1 1 0.01 dme-miR-283-5p 7mer-A1 GATATTA X 21026306 21026312 - X_21026306_21026312_- 0.782911824 0.782911824 0.782911824 0 CG1532 FBtr0339633 21026123 21026407 X - 21026289 21026435 stop_codon CG1532 FlyBase G69341.1 CGAAAAGGATCCCTTCCAACCGAAATGACTTTCCCAGCAATCCTTGAGCACTGTTATTTGTACACAGCACCTTTTGTATTTGGATTTTGTATTGTCTAATGGTTAATGGCTGTTTTCAACGGAGATATTATACTTTTTAAAACATTG 242 21026329 0.948311391 30 237 2191 0.978571429 1.960629308 0.110714286 0.132231405 0.25 242 4 2 274 X:21026289-21026435 7 CG1532 FBtr0339633 21026123 21026407 GATATTA 7mer-A1 dme-miR-283-5p X - 21026255 21026474 stop_codon CG1532 FlyBase G52136.1 GGTGGAGTCCGATGGCGATAAGCGACTGGATCGAAACATCGAAAAGGATCCCTTCCAACCGAAATGACTTTCCCAGCAATCCTTGAGCACTGTTATTTGTACACAGCACCTTTTGTATTTGGATTTTGTATTGTCTAATGGTTAATGGCTGTTTTCAACGGAGATATTATACTTTTTAAAACATTGTAAAACATCACCTACGCTCGTTCTTGTTTTACAA 171 21026329 0.988009028 28 168 1518 0.986784141 2.049218023 0.162995595 0.263157895 0.444933921 171 2 1 224 X:21026255-21026474 7 36 5827 FBgn0031143 230.96 24.43 37.44666667 0.155871147 1.473598035 0.961367278 17 17 17 0.01 dme-miR-184-3p 6mer3-8 TCCGTC X 21038831 21038836 + X_21038831_21038836_+ 0.999260778 0.995671314 0.997466046 0.00253816 Ntf-2 FBtr0113007 21037719 21039543 X + 21038792 21038918 stop_codon Ntf-2 FlyBase G63291.1 AGGCCAACGCAGGCACCTTCTTTGTGGCCCACGACATCTTCCGTCTCAACATCCACAACTCTGCCTAGGAGCACTCCACTTACCTACGTATGCACACCACTCAGCACCACACATAATCGACATCCAA 191 21038830 0.9685458 13 184 1017 0.960352423 1.736396502 0.035242291 0.162303665 0.295154185 191 6 3 218 X:21038792-21038918 6 Ntf-2 FBtr0113007 21037719 21039543 TCCGTC 6mer3-8 dme-miR-184-3p X + 21038811 21038964 stop_codon Ntf-2 FlyBase G47722.1 CTTTGTGGCCCACGACATCTTCCGTCTCAACATCCACAACTCTGCCTAGGAGCACTCCACTTACCTACGTATGCACACCACTCAGCACCACACATAATCGACATCCAAAGATGCCCAGCGCCAGATGATAACAACAAGCTCGGCAGTGGAACTC 110 21038830 0.864498965 14 107 519 0.962566845 1.77815125 0.096256684 0.445454545 0.673796791 110 5 2 180 X:21038811-21038964 6 123.5 5828 FBgn0031145 2698.153333 430.73 661.49 0.045772047 0.286722541 0.186699723 1 1 1 0.01 dme-miR-1006-3p 7mer-m8 CGAATTT X 21039229 21039235 + X_21039229_21039235_+ 0.661614703 0.661614704 0.661614704 0 Ntf-2 FBtr0333760|FBtr0113007|FBtr0333762 21038858|21037719|21038858 21039543|21039543|21041467 X + 21039221 21039276 3'utr Ntf-2 FlyBase G63295.1 AGGACTATCGAATTTGGTGGTATGTGCCGTGCTACAAGCTCGTATTTCGAATTCCC 9 21039235 0.92334403 7 9 60 1 1.079181246 0.5 0.333333333 0.5 9 0 0 12 X:21039221-21039276 7 Ntf-2 FBtr0333762|FBtr0113007|FBtr0333760 21038858|21037719|21038858 21041467|21039543|21039543 CGAATTT 7mer-m8 dme-miR-1006-3p X + 21039197 21039251 3'utr Ntf-2 FlyBase G47725.1 TGGATCTCGCGATCTAATTTAGCTAGGACTATCGAATTTGGTGGTATGTGCCGTG 13 21039229 0.976713341 6 12 100 0.941176471 1.204119983 0.705882353 0.230769231 0.411764706 13 1 0 16 X:21039197-21039251 7 7.5 5829 FBgn0031145 2698.153333 430.73 661.49 0.002779679 0.0174123 0.01133804 -6 0 -3 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC X 21050232 21050238 - X_21050232_21050238_- 0.661615645 0.661615645 0.661615645 0 CG1518 FBtr0345923|FBtr0077264 21049883|21049962 21050270|21050270 X - 21050109 21050316 stop_codon CG1518 FlyBase G69358.1 GGTGCGCATCTACAAGGTTAAGGATCTGCCGAATCGTGGAGTCTGAGAAATAAGTGTCGCAGTCATTCCGCTCTATTCTGTGTTCTGTACATTAGCTAACTCTGCCCGTCTCCCTCTATCTCGAATATTTGGCAATCTCTCTCGCTCTATGAGCACCAATTGCTGCATTCTCCTGCTTTGCCCATCATGCATTTAGTTCTACACTGGC 211 21050240 0.896288387 34 202 1959 0.957198444 2.390935107 0.13618677 0.184834123 0.3307393 211 11 0 246 X:21050109-21050316 7 CG1518 FBtr0345923|FBtr0077264 21049883|21049962 21050270|21050270 TGTGTTC 7mer-m8 dme-miR-317-3p X - 21050081 21050382 stop_codon CG1518 FlyBase G52149.1 CGAGATCGGCAACAAGGACTTTGAACTGGATGTCATGGAGGAGGCGTACACCACGGAGCACTGGCTGGTGCGCATCTACAAGGTTAAGGATCTGCCGAATCGTGGAGTCTGAGAAATAAGTGTCGCAGTCATTCCGCTCTATTCTGTGTTCTGTACATTAGCTAACTCTGCCCGTCTCCCTCTATCTCGAATATTTGGCAATCTCTCTCGCTCTATGAGCACCAATTGCTGCATTCTCCTGCTTTGCCCATCATGCATTTAGTTCTACACTGGCACAAAACCACAAAAACCAAGTATTTTTT 155 21050240 0.987604808 37 145 1296 0.94092827 1.503206823 0.126582278 0.35483871 0.578059072 155 8 6 223 X:21050081-21050382 7 92.5 5830 FBgn0031149 1278.48 56.59333333 86.55 0.072351542 1.634468135 1.068746389 2 2 2 0.01 dme-miR-283-5p 7mer-A1 GATATTA X 21062460 21062466 - X_21062460_21062466_- 0.782911824 0.782911824 0.782911824 0 CG32512 FBtr0077262|FBtr0340438|FBtr0332848|FBtr0332847 21062382|21062275|21062382|21062420 21062966|21062966|21062966|21062966 X - 21062435 21062480 3'utr CG32512 FlyBase G69374.1 CTGTTTTAAGTGCGGATATTAAGTGAATGTAATTTATATTAAAACA 5 21062470 0.99287912 4 4 41 0.625 0.698970004 0 0.4 0.625 5 3 0 5 X:21062435-21062480 7 CG32512 FBtr0332847|FBtr0332848|FBtr0340438|FBtr0077262 21062420|21062382|21062275|21062382 21062966|21062966|21062966|21062966 GATATTA 7mer-A1 dme-miR-283-5p X - 21062441 21062517 3'utr CG32512 FlyBase G52164.1 CTGTTATTTATTAATCCACCGAAAACTATGTTTTTCTCTGTTTTAAGTGCGGATATTAAGTGAATGTAATTTATATT 14 21062453 0.848484342 9 13 131 0.9 1.255272505 0.25 0.428571429 0.6 14 2 0 18 X:21062441-21062517 7 4.5 5831 FBgn0052512 150.89 8.04 12.13666667 0.02982305 0.559701493 0.370777259 4 -13 -4.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA X 21062678 21062685 - X_21062678_21062685_- 0.650171355 0.650171355 0.650171355 0 CG32512 FBtr0077262|FBtr0077262|FBtr0077262|FBtr0340438|FBtr0340438|FBtr0340438|FBtr0332848|FBtr0332848|FBtr0332848|FBtr0332847|FBtr0332847|FBtr0332847 21062382|21062382|21062382|21062275|21062275|21062275|21062382|21062382|21062382|21062420|21062420|21062420 21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966 X - 21062595 21063085 stop_codon CG32512 FlyBase G69375.1 AGCGCATCCACAAGGGATTCCGGCGCATTCACATGACCATCGCCATTGGCAATATGACGGTCATGCTGACCACCTGCCTGCAGCTGTATTTTCTGGCATCGAAAATACGCCTTAGCTAAGGCAAGCCCGAAGTGAAGAATTTATAGATTTAGGTATCCACCACATAACAACGCATACACACACACACACATTACTACTACTGTACGTTCCACGTTCGATAAATGTCTCAAATTCAAATATGGCTTATTGAACACTTGAGTTTTTGAACTGGTCCTCCATCCGGCCCCAAATGCCCTTCCTCCGCCCCACACACGCCCACACCACCCATACGCCCATGCACGAAAATATTTAATTTCTCCCAAGGACGCCTTGTTTGCGACGACCTTTCCAATCTGATTTCCTGTGATAAACTCAGCCCAAAACTCCCAAAACAAAACACCCACCCGCAAACCACAGCACATTTAGCCTAGAGTTGATAGCCAATAATTTAC 887 21062688 0.984465956 77 817 6566 0.924783028 1.867875255 0.107039537 0.145434047 0.269045323 887 66 12 959 X:21062595-21063085 8 CG32512 FBtr0332847|FBtr0332847|FBtr0332847|FBtr0332848|FBtr0332848|FBtr0332848|FBtr0340438|FBtr0340438|FBtr0340438|FBtr0077262|FBtr0077262|FBtr0077262 21062420|21062420|21062420|21062382|21062382|21062382|21062275|21062275|21062275|21062382|21062382|21062382 21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 21062645 21062732 3'utr CG32512 FlyBase G52166.1 TTCTCCCAAGGACGCCTTGTTTGCGACGACCTTTCCAATCTGATTTCCTGTGATAAACTCAGCCCAAAACTCCCAAAACAAAACACCC 443 21062688 0.986273785 17 403 3534 0.907378336 2.062957834 0.09733124 0.340857788 0.541601256 443 55 4 578 X:21062645-21062732 8 529 5832 FBgn0052512 150.89 8.04 12.13666667 3.5058652 65.7960199 43.58692667 3 3 3 0.01 dme-bantam-3p 7mer-A1 GATCTCA X 21078423 21078429 + X_21078423_21078429_+ 0.823349562 0.823349562 0.823349562 0 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 X + 21078359 21078459 3'utr bves FlyBase G63328.1 AAGTATAATGACTAGCATTGAAACTGGTTTGATTACAGCTCTTCAGCTTCAATTACCGATTCTAGATCTCAAGATCGATCAGTCTAGTGACAGGTGATAGG 14 21078419 0.981095638 11 14 97 1 1.146128036 0.428571429 0 0 14 0 0 14 X:21078359-21078459 7 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 GATCTCA 7mer-A1 dme-bantam-3p X + 21078409 21078459 3'utr bves FlyBase G47753.1 AATTACCGATTCTAGATCTCAAGATCGATCAGTCTAGTGACAGGTGATAGG 8 21078419 0.885381313 5 7 50 0.857142857 1.079181246 0.285714286 0.75 0.857142857 8 2 0 12 X:21078409-21078459 7 4.5 5833 FBgn0031150 459.0933333 15.14333333 23.32333333 0.009801928 0.297160467 0.192939831 4 4 4 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT X 21078441 21078446 + X_21078441_21078446_+ 0.693036747 0.886789577 0.789913162 0.137003989 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 X + 21078359 21078459 3'utr bves FlyBase G63328.1 AAGTATAATGACTAGCATTGAAACTGGTTTGATTACAGCTCTTCAGCTTCAATTACCGATTCTAGATCTCAAGATCGATCAGTCTAGTGACAGGTGATAGG 14 21078419 0.981095638 11 14 97 1 1.146128036 0.428571429 0 0 14 0 0 14 X:21078359-21078459 6 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" X + 21078409 21078459 3'utr bves FlyBase G47753.1 AATTACCGATTCTAGATCTCAAGATCGATCAGTCTAGTGACAGGTGATAGG 8 21078419 0.885381313 5 7 50 0.857142857 1.079181246 0.285714286 0.75 0.857142857 8 2 0 12 X:21078409-21078459 6 2.5 5834 FBgn0031150 459.0933333 15.14333333 23.32333333 0.005445516 0.165089148 0.107188795 22 22 22 0.01 dme-miR-277-3p 7mer-A1 GCATTTA X 21078535 21078541 + X_21078535_21078541_+ 0.823349562 0.823349562 0.823349562 0 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 X + 21078525 21078594 3'utr bves FlyBase G63329.1 TTACCGCTTGGCATTTACTGGAAATTTACTGTGCTGGCACATCAATCAAGTCTCTAAATCTTCCATTAAC 12 21078533 0.856169551 8 12 76 1 1.204119983 0.25 0.333333333 0.5 12 0 0 16 X:21078525-21078594 7 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 GCATTTA 7mer-A1 dme-miR-277-3p X + 21078516 21078586 3'utr bves FlyBase G47754.1 TCTTATTTCTTACCGCTTGGCATTTACTGGAAATTTACTGTGCTGGCACATCAATCAAGTCTCTAAATCTT 10 21078533 0.989496815 3 8 91 0.9375 1.176091259 0.4375 0.4 0.625 10 1 0 15 X:21078516-21078586 7 6.5 5835 FBgn0031150 459.0933333 15.14333333 23.32333333 0.014158341 0.429231785 0.278690868 2 2 2 0.01 dme-miR-1007-3p 7mer-m8 TGAGCTT X 21078669 21078675 + X_21078669_21078675_+ 0.620203442 0.620203442 0.620203442 0 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 X + 21078646 21078704 3'utr bves FlyBase G63330.1 CGTTGATTGATTTGCATACAAATTGAGCTTGAAGAAAGCGTGAAAACTAATTAGAATTA 12 21078669 0.790891532 5 12 66 1 1.176091259 0.2 0.166666667 0.333333333 12 0 0 15 X:21078646-21078704 7 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 TGAGCTT 7mer-m8 dme-miR-1007-3p X + 21078638 21078750 3'utr bves FlyBase G47755.1 CGTTGATTCGTTGATTGATTTGCATACAAATTGAGCTTGAAGAAAGCGTGAAAACTAATTAGAATTAATATCGAATAATATTTGATAATGTTAAGCAATACATAGCCTAAGTT 20 21078669 0.98045255 10 18 116 0.956521739 1.342422681 0.173913043 0.15 0.260869565 20 1 0 22 X:21078638-21078750 7 10.5 5836 FBgn0031150 459.0933333 15.14333333 23.32333333 0.022871166 0.693374422 0.45019294 0 0 0 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA X 21078882 21078887 + X_21078882_21078887_+ 1 1 1 0 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 X + 21078751 21078903 3'utr bves FlyBase G63331.1 GTTGTACATACGCTATATATATATATTTGCTGTACATAATCCCGAGTGCCCTCAAATCCGAGAACCACACCCCCGTCCCCTAATCTCCACTAATACTCCCCCAAGAAAGTGTAATAAACGTAGTGGAATCAATGTGAATGTAAACAAGCCAAA 44 21078889 0.909026794 13 41 215 0.924528302 1.389166084 0.094339623 0.181818182 0.320754717 44 3 1 49 X:21078751-21078903 6 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 ATGTGA 6mer3-8 dme-miR-1003-3p X + 21078857 21078902 3'utr bves FlyBase G47757.1 AAGTGTAATAAACGTAGTGGAATCAATGTGAATGTAAACAAGCCAA 27 21078889 0.962920868 5 26 145 0.974358974 1.579783597 0 0.407407407 0.58974359 27 1 0 38 X:21078857-21078902 6 25 5837 FBgn0031150 459.0933333 15.14333333 23.32333333 0.054455158 1.650891481 1.071887952 -7 -7 -7 0.01 dme-miR-317-3p 6mer3-8 TGTGTT X 21080872 21080877 + X_21080872_21080877_+ 1 1 1 0 bves FBtr0332845|FBtr0332846 21080843|21080843 21082391|21082391 X + 21080845 21080922 3'utr bves FlyBase G63333.1 AAGGGATCCAGATGAAATGTTTAGACTTGTGTTTTTGAGTATTATTAGATGTATATTTTAGGCAATACTGAGGAACGA 205 21080865 0.844099422 19 191 2042 0.926640927 2.380211242 0.135135135 0.224390244 0.386100386 205 19 0 240 X:21080845-21080922 6 bves FBtr0332845|FBtr0332846 21080843|21080843 21082391|21082391 TGTGTT 6mer3-8 dme-miR-317-3p X + 21080846 21080914 3'utr bves FlyBase G47759.1 AGGGATCCAGATGAAATGTTTAGACTTGTGTTTTTGAGTATTATTAGATGTATATTTTAGGCAATACTG 167 21080865 0.766667626 19 154 1663 0.908333333 2.338456494 0.133333333 0.353293413 0.55 167 22 0 218 X:21080846-21080914 6 173 5838 FBgn0031150 459.0933333 15.14333333 23.32333333 0.376829693 11.42416905 7.417464628 7 7 7 0.01 dme-miR-965-3p 6mer3-8 TACGCT X 21081378 21081383 + X_21081378_21081383_+ 1 1 1 0 bves FBtr0332845|FBtr0332846 21080843|21080843 21082391|21082391 X + 21081363 21081404 3'utr bves FlyBase G63337.1 AGTTGCAAATTGTATTACGCTAAAACTACGGATTAGACGAAT 6 21081377 0.78452336 3 6 34 1 0.77815125 0 0 0 6 0 0 6 X:21081363-21081404 6 bves FBtr0332845|FBtr0332846 21080843|21080843 21082391|21082391 TACGCT 6mer3-8 dme-miR-965-3p X + 21081350 21081389 3'utr bves FlyBase G47761.1 TTAAAACTAGAATAGTTGCAAATTGTATTACGCTAAAACT 11 21081375 0.593559218 4 10 72 1 1.204119983 0.1875 0.272727273 0.5 11 0 0 16 X:21081350-21081389 6 7 5839 FBgn0031150 459.0933333 15.14333333 23.32333333 0.015247444 0.462249615 0.300128627 1 3 2 0.01 dme-miR-305-3p 7mer-m8 ATGTGCC X 21081854 21081860 + X_21081854_21081860_+ 0.674515655 0.674515655 0.674515655 0 bves FBtr0332845|FBtr0332846 21080843|21080843 21082391|21082391 X + 21081822 21081872 3'utr bves FlyBase G63339.1 GACCTTTGATAGTCCTTGTTGCTTTTGTATCTATGTGCCTGAATTCATGCA 18 21081855 0.988981958 2 18 174 1 1.342422681 0 0.166666667 0.318181818 18 0 0 22 X:21081822-21081872 7 bves FBtr0332845|FBtr0332846 21080843|21080843 21082391|21082391 ATGTGCC 7mer-m8 dme-miR-305-3p X + 21081814 21081878 3'utr bves FlyBase G47763.1 TACCCATAGACCTTTGATAGTCCTTGTTGCTTTTGTATCTATGTGCCTGAATTCATGCATGTGCA 14 21081855 0.989525683 2 13 133 0.925925926 0.920818754 0.148148148 0.642857143 0.814814815 14 0 2 25 X:21081814-21081878 7 14.5 5840 FBgn0031150 459.0933333 15.14333333 23.32333333 0.031583992 0.957517059 0.621695012 -1 -1 -1 0.01 dme-miR-1006-3p 6mer2-7 GAATTT X 2111807 2111812 + X_2111807_2111812_+ 1 1 1 0 csw FBtr0070379|FBtr0070380|FBtr0070378|FBtr0333260 2111732|2111800|2111800|2111800 2115701|2113664|2113664|2115701 X + 2111797 2111892 stop_codon csw FlyBase G58234.1 CATGACAAATGAATTTCTAAGTCGCGACGCCCCCTTGACACGCCCCCTTGACACGCCCCCCTGACACCCACCTCCCTCCACACGCACACAGACCAC 33 2111811 0.999769472 8 31 150 0.975 1.591064607 0.225 0.090909091 0.25 33 1 0 39 X:2111797-2111892 6 csw FBtr0070378|FBtr0333260|FBtr0070379|FBtr0070380 2111800|2111800|2111732|2111800 2113664|2115701|2115701|2113664 GAATTT 6mer2-7 dme-miR-1006-3p X + 2111793 2111873 stop_codon csw FlyBase G44053.1 AAAACATGACAAATGAATTTCTAAGTCGCGACGCCCCCTTGACACGCCCCCTTGACACGCCCCCCTGACACCCACCTCCCT 35 2111811 0.912101243 9 30 158 0.882352941 1.352182518 0.235294118 0.314285714 0.529411765 35 5 1 45 X:2111793-2111873 6 23 5841 FBgn0000382 593.5233333 15.53 24.04 0.038751636 1.481004507 0.956738769 -4 -4 -4 0.01 dme-miR-317-3p 6mer2-7 GTGTTC X 2112083 2112088 + X_2112083_2112088_+ 1 1 1 0 csw FBtr0070379|FBtr0070380|FBtr0070378|FBtr0333260 2111732|2111800|2111800|2111800 2115701|2113664|2113664|2115701 X + 2112011 2112099 3'utr csw FlyBase G58236.1 TCTATATACTTTTTTGTAATTGTGTGTAATGTAATGTTTAGTTTTATGTTATTGTCTCGCTTTATGTTGTAAGTGTTCCCTGCACACGA 39 2112072 0.743175333 17 38 467 0.977777778 1.643452676 0.177777778 0.102564103 0.222222222 39 1 0 44 X:2112011-2112099 6 csw FBtr0070378|FBtr0333260|FBtr0070379|FBtr0070380 2111800|2111800|2111732|2111800 2113664|2115701|2115701|2113664 GTGTTC 6mer2-7 dme-miR-317-3p X + 2112029 2112228 3'utr csw FlyBase G44055.1 ATTGTGTGTAATGTAATGTTTAGTTTTATGTTATTGTCTCGCTTTATGTTGTAAGTGTTCCCTGCACACGAAAAGCAGTAACCCCACCACCACCCCAAAACCCAAAACCCAGCATATTTATGTAGTAGTATTGTAAGAATCCCCGAACCGGTAGTTGAGGATACAATCTGGGCGGAACTGCAGCAGATCCGCCAAAAAAC 38 2112072 0.98582039 19 36 291 0.929824561 1.72427587 0.263157895 0.394736842 0.596491228 38 4 0 53 X:2112029-2112228 6 9.5 5842 FBgn0000382 593.5233333 15.53 24.04 0.01600611 0.611719253 0.395174709 11 11 11 0.01 dme-miR-8-3p 6mer2-7 AGTATT X 2112155 2112160 + X_2112155_2112160_+ 1 1 1 0 csw FBtr0070379|FBtr0070380|FBtr0070378|FBtr0333260 2111732|2111800|2111800|2111800 2115701|2113664|2113664|2115701 X + 2112138 2112210 3'utr csw FlyBase G58237.1 CAGCATATTTATGTAGTAGTATTGTAAGAATCCCCGAACCGGTAGTTGAGGATACAATCTGGGCGGAACTGCA 20 2112184 0.913359323 10 19 123 0.962962963 1.113943352 0.407407407 0.2 0.407407407 20 0 1 26 X:2112138-2112210 6 csw FBtr0070378|FBtr0333260|FBtr0070379|FBtr0070380 2111800|2111800|2111732|2111800 2113664|2115701|2115701|2113664 AGTATT 6mer2-7 dme-miR-8-3p X + 2112029 2112228 3'utr csw FlyBase G44055.1 ATTGTGTGTAATGTAATGTTTAGTTTTATGTTATTGTCTCGCTTTATGTTGTAAGTGTTCCCTGCACACGAAAAGCAGTAACCCCACCACCACCCCAAAACCCAAAACCCAGCATATTTATGTAGTAGTATTGTAAGAATCCCCGAACCGGTAGTTGAGGATACAATCTGGGCGGAACTGCAGCAGATCCGCCAAAAAAC 38 2112145 0.98582039 19 36 291 0.929824561 1.72427587 0.263157895 0.394736842 0.596491228 38 4 0 53 X:2112029-2112228 6 9.5 5843 FBgn0000382 593.5233333 15.53 24.04 0.01600611 0.611719253 0.395174709 -29 10 -9.5 0.01 dme-miR-308-3p 7mer-m1 TGTGATT X 2112756 2112762 + X_2112756_2112762_+ 0.521223855 0.521223855 0.521223855 0 csw FBtr0070379|FBtr0070380|FBtr0070378|FBtr0333260 2111732|2111800|2111800|2111800 2115701|2113664|2113664|2115701 X + 2112618 2112784 3'utr csw FlyBase G58239.1 TGAAACGGAAACGGGTTACCGGTTGGAGTGCAAATAAAGTTTTTAGTGTAGTAAGTGTTGACAAAATCGATAGAGAAGAAATTAGAGGAGTAACTGAGGCAGTAAGCACGTAACGATAATGATACAAAAAGCGTTGATTGTGATTCGAGTGACAGCGAGAACAGAAA 396 2112755 0.967813999 24 374 2421 0.945295405 1.594091062 0.396061269 0.131313131 0.24726477 396 15 10 432 X:2112618-2112784 7 csw FBtr0070378|FBtr0333260|FBtr0070379|FBtr0070380 2111800|2111800|2111732|2111800 2113664|2115701|2115701|2113664 TGTGATT 7mer-m1 dme-miR-308-3p X + 2112618 2112784 3'utr csw FlyBase G44057.1 TGAAACGGAAACGGGTTACCGGTTGGAGTGCAAATAAAGTTTTTAGTGTAGTAAGTGTTGACAAAATCGATAGAGAAGAAATTAGAGGAGTAACTGAGGCAGTAAGCACGTAACGATAATGATACAAAAAGCGTTGATTGTGATTCGAGTGACAGCGAGAACAGAAA 275 2112755 0.974734241 22 250 1696 0.902147971 1.347042878 0.436754177 0.367272727 0.584725537 275 25 16 378 X:2112618-2112784 7 214 5844 FBgn0000382 593.5233333 15.53 24.04 0.360558697 13.77978107 8.901830283 1 1 1 0.01 dme-miR-317-3p 6mer3-8 TGTGTT X 2113125 2113130 + X_2113125_2113130_+ 1 1 1 0 csw FBtr0070379|FBtr0070380|FBtr0070378|FBtr0333260 2111732|2111800|2111800|2111800 2115701|2113664|2113664|2115701 X + 2112984 2113154 3'utr csw FlyBase G58242.1 ACAGATCCAGATTCAGATCCAGATCTATATCTCTAGCAGCCAATTTCTGATTTCCCCTTCCCTCTTAGTTTTCCCATTAATTTAGTGATTGTGTGTATATTTTTAATTGTATATTGAAGATTATTTATAGCGATTGTCCATTGTGTTACATTTCAAATGTTCGAAAGAATT 49 2113124 0.990338257 16 45 456 0.93220339 1.263241435 0.06779661 0.163265306 0.305084746 49 2 2 55 X:2112984-2113154 6 csw FBtr0070378|FBtr0333260|FBtr0070379|FBtr0070380 2111800|2111800|2111732|2111800 2113664|2115701|2115701|2113664 TGTGTT 6mer3-8 dme-miR-317-3p X + 2113090 2113164 3'utr csw FlyBase G44062.1 TTGTATATTGAAGATTATTTATAGCGATTGTCCATTGTGTTACATTTCAAATGTTCGAAAGAATTGTATTTAGAA 28 2113124 0.990204993 9 24 256 0.923076923 1.079181246 0.076923077 0.285714286 0.487179487 28 1 2 36 X:2113090-2113164 6 21 5845 FBgn0000382 593.5233333 15.53 24.04 0.035381928 1.352221507 0.873544093 1 1 1 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 2113342 2113347 + X_2113342_2113347_+ 1 1 1 0 csw FBtr0070379|FBtr0070380|FBtr0070378|FBtr0333260 2111732|2111800|2111800|2111800 2115701|2113664|2113664|2115701 X + 2113229 2113363 3'utr csw FlyBase G58243.2 TCTGTCTCTCTCTCTCTCTCTCCCTCACTGTCTATGCACGAGTGTTTTCTTAACTAAGTTTATTATTTCAACGCTGAAGCGTAATCAAACTATATATGCAATATTTAAGCACAGTACCTTGGGCGCTGCAAAGAA 26 2113348 0.990156291 13 22 178 0.9 0.954242509 0.133333333 0.153846154 0.266666667 26 1 2 27 X:2113229-2113363 6 csw FBtr0070378|FBtr0333260|FBtr0070379|FBtr0070380 2111800|2111800|2111732|2111800 2113664|2115701|2115701|2113664 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X + 2113296 2113361 3'utr csw FlyBase G44064.1 TCAACGCTGAAGCGTAATCAAACTATATATGCAATATTTAAGCACAGTACCTTGGGCGCTGCAAAG 9 2113348 0.952522644 5 9 43 1 1.079181246 0.416666667 0.333333333 0.5 9 0 0 12 X:2113296-2113361 6 6.5 5846 FBgn0000382 593.5233333 15.53 24.04 0.010951549 0.418544752 0.270382696 -6 -6 -6 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA X 2113463 2113468 + X_2113463_2113468_+ 1 1 1 0 csw FBtr0070379|FBtr0070380|FBtr0070378|FBtr0333260 2111732|2111800|2111800|2111800 2115701|2113664|2113664|2115701 X + 2113432 2113473 3'utr csw FlyBase G58244.1 TAGCAGCGAAATGTAAATCAATTAGATTATTGTGCAAATTTG 5 2113461 0.9865841 3 5 42 1 0.698970004 0.4 0 0 5 0 0 5 X:2113432-2113473 6 csw FBtr0070378|FBtr0333260|FBtr0070379|FBtr0070380 2111800|2111800|2111732|2111800 2113664|2115701|2115701|2113664 GTGCAA 6mer3-8 dme-miR-92b-3p X + 2113433 2113502 3'utr csw FlyBase G44065.1 AGCAGCGAAATGTAAATCAATTAGATTATTGTGCAAATTTGAGTAATATATTTAAAACATACCCTTATTT 7 2113461 0.986680895 6 7 56 1 1.079181246 0.083333333 0.285714286 0.583333333 7 0 0 12 X:2113433-2113502 6 3.5 5847 FBgn0000382 593.5233333 15.53 24.04 0.005896988 0.225370251 0.145590682 2 2 2 0.01 dme-bantam-3p 6mer3-8 TGATCT X 2113554 2113559 + X_2113554_2113559_+ 1 1 1 0 csw FBtr0070379|FBtr0070380|FBtr0070378|FBtr0333260 2111732|2111800|2111800|2111800 2115701|2113664|2113664|2115701 X + 2113521 2113579 3'utr csw FlyBase G58245.1 GCTTTTGTAAGTGCTTTAAATTGTTATTCATCTTGATCTTGCAAAAAAATGAAAAAACC 200 2113553 0.756151155 9 190 1839 0.957692308 1.618048097 0.05 0.24 0.415384615 200 6 5 249 X:2113521-2113579 6 csw FBtr0070378|FBtr0333260|FBtr0070379|FBtr0070380 2111800|2111800|2111732|2111800 2113664|2115701|2115701|2113664 TGATCT 6mer3-8 dme-bantam-3p X + 2113531 2113574 3'utr csw FlyBase G44066.1 GTGCTTTAAATTGTTATTCATCTTGATCTTGCAAAAAAATGAAA 160 2113553 0.75117583 6 154 1474 0.968325792 1.631443769 0.013574661 0.2875 0.484162896 160 3 4 214 X:2113531-2113574 6 177.5 5848 FBgn0000382 593.5233333 15.53 24.04 0.299061536 11.42949131 7.383527454 1 1 1 0.01 dme-miR-14-3p 6mer2-7 AGACTG X 2116138 2116143 - X_2116138_2116143_- 0.998231986 0.986550881 0.992391433 0.008259785 ph-d FBtr0070433|FBtr0112843 2115725|2115725 2116865|2116865 X - 2116076 2116202 3'utr ph-d FlyBase G64261.1 TAGCAAGAGGGGTAATATCGTAGCTCAAATGACAGGACGCCACATGTATGATAGAGCATAGACTGCCATCCCAGTCATCAATTCATCACTTTGTATAGAAGTTCACAATTACTCATAATCACTAACG 1317 2116144 0.919919228 17 1284 5161 0.973951715 2.583482164 0.195679797 0.1579347 0.295425667 1317 38 3 1533 X:2116076-2116202 6 ph-d FBtr0070433|FBtr0112843 2115725|2115725 2116865|2116865 AGACTG 6mer2-7 dme-miR-14-3p X - 2116120 2116337 3'utr ph-d FlyBase G48452.2 TGACCATGCTGATCTCCCACGACCTTTGCATGGACCTTTGCCTACCTGTGGACCGGGTCCAACCGGGTCTGCCACCCAAGCTGAATTTGATTCACTTGAAGCGGACTTTCAATCCTTTTGTACGTAATCTAAACATAGCAAGAGGGGTAATATCGTAGCTCAAATGACAGGACGCCACATGTATGATAGAGCATAGACTGCCATCCCAGTCATCAATT 834 2116144 0.9406239 25 814 3229 0.978613569 2.423900919 0.205752212 0.42206235 0.644542773 834 25 4 1327 X:2116120-2116337 6 669 5849 FBgn0004860 503.0533333 10.12666667 15.45333333 1.329878873 66.06319947 43.29163072 1 1 1 0.01 dme-miR-1012-3p 6mer3-8 TTGACT X 2126635 2126640 - X_2126635_2126640_- 1 1 1 0 ph-p FBtr0301515|FBtr0343589|FBtr0070432|FBtr0345598 2126208|2126208|2126208|2126208 2126808|2126808|2126808|2126808 X - 2126626 2126655 3'utr ph-p FlyBase G64274.1 CAGGTCTTAAACCCATTGACTTTGTACATA 10 2126640 0.750495144 2 10 79 1 1.113943352 0 0.2 0.384615385 10 0 0 13 X:2126626-2126655 6 ph-p FBtr0301515|FBtr0343589|FBtr0070432|FBtr0345598 2126208|2126208|2126208|2126208 2126808|2126808|2126808|2126808 TTGACT 6mer3-8 dme-miR-1012-3p X - 2126621 2126663 3'utr ph-p FlyBase G48460.1 CAGGCCATCAGGTCTTAAACCCATTGACTTTGTACATACTCCC 14 2126639 0.813840302 6 14 105 1 1.361727836 0.217391304 0.5 0.695652174 14 0 0 23 X:2126621-2126663 6 11.5 5850 FBgn0004861 584.37 11.91 18.33 0.019679313 0.965575147 0.627386798 0 -1 -0.5 0.01 dme-bantam-3p 7mer-m8 TGATCTC X 2126772 2126778 - X_2126772_2126778_- 0.661615243 0.661615243 0.661615243 0 ph-p FBtr0301515|FBtr0343589|FBtr0070432|FBtr0345598 2126208|2126208|2126208|2126208 2126808|2126808|2126808|2126808 X - 2126748 2126817 stop_codon ph-p FlyBase G64275.2 GCGCAGTAGGGCAGCTAGAGCACGAAAAGCCGAAAAAGATGATCTCCTAACCGAGCAGTGGACCTGGTTC 187 2126778 0.926166365 4 177 612 0.953051643 1.705436047 0.192488263 0.117647059 0.225352113 187 7 3 203 X:2126748-2126817 7 ph-p FBtr0301515|FBtr0343589|FBtr0070432|FBtr0345598 2126208|2126208|2126208|2126208 2126808|2126808|2126808|2126808 TGATCTC 7mer-m8 dme-bantam-3p X - 2126700 2126821 stop_codon ph-p FlyBase G48461.1 AGGAGCGCAGTAGGGCAGCTAGAGCACGAAAAGCCGAAAAAGATGATCTCCTAACCGAGCAGTGGACCTGGTTCAACCAAGTCTGTCGTGCCAGGTGATTCTGATTCAATCGGGCAGGCGAA 134 2126778 0.877258461 11 130 472 0.972826087 1.65079304 0.135869565 0.298507463 0.489130435 134 2 3 179 X:2126700-2126821 7 151.5 5851 FBgn0004861 584.37 11.91 18.33 0.259253555 12.72040302 8.265139116 0 0 0 0.01 dme-miR-252-5p 8mer-m1 GTACTTAG X 21292425 21292432 - X_21292425_21292432_- 0.636789085 0.636789085 0.636789085 0 CG1718 FBtr0306679 21292306 21293337 X - 21292396 21292448 3'utr CG1718 FlyBase G69406.1 GTGTATTTATTTCGATGTACTTAGACCGGCTTACCAAAGCGTGTAAATAAGTC 33 21292433 0.753608723 4 33 234 1 1.556302501 0.083333333 0.090909091 0.166666667 33 0 0 36 X:21292396-21292448 8 CG1718 FBtr0306679 21292306 21293337 GTACTTAG 8mer-m1 dme-miR-252-5p X - 21292404 21292449 3'utr CG1718 FlyBase G52188.1 TGTGTATTTATTTCGATGTACTTAGACCGGCTTACCAAAGCGTGTA 32 21292433 0.738927434 4 31 223 0.97826087 1.653212514 0.043478261 0.3125 0.52173913 32 1 0 45 X:21292404-21292449 8 32 5852 FBgn0031170 761.1566667 13.58333333 20.66333333 0.042041279 2.355828221 1.548636877 1 1 1 0.01 dme-miR-276a-3p 6mer3-8 AGTTCC X 21292565 21292570 - X_21292565_21292570_- 1 1 1 0 CG1718 FBtr0306679 21292306 21293337 X - 21292454 21292599 3'utr CG1718 FlyBase G69407.1 CCATATACAAATGCTTGATATGCACGATTAGTTCCCAAGATCTTTTAGTTTTGATTTATTCTTTAATTTTCGACTTTTAAAAGTATTGGCCAGATTTGGCCCGAAACTATTCCCAGCGCCCAAAGGAAACTTGTTGCATATAGAGT 32 21292555 0.87173246 13 30 219 0.975 1.290034611 0.25 0.1875 0.35 32 0 1 39 X:21292454-21292599 6 CG1718 FBtr0306679 21292306 21293337 AGTTCC 6mer3-8 dme-miR-276a-3p X - 21292541 21292603 3'utr CG1718 FlyBase G52190.1 ATATCCATATACAAATGCTTGATATGCACGATTAGTTCCCAAGATCTTTTAGTTTTGATTTAT 24 21292555 0.777013583 8 20 177 0.806451613 1.397940009 0.064516129 0.260869565 0.451612903 23 6 0 25 X:21292541-21292603 6 17.5 5853 FBgn0031170 761.1566667 13.58333333 20.66333333 0.022991325 1.288343558 0.846910792 -15 -15 -15 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 21292709 21292714 - X_21292709_21292714_- 1 1 1 0 CG1718 FBtr0306679|FBtr0306679|FBtr0306679 21292306|21292306|21292306 21293337|21293337|21293337 X - 21292660 21292935 stop_codon CG1718 FlyBase G69408.1 TCCAGTCGCCTCTCGGAATTGAGGAAGCTGTGCAAGTGCCTGCTAACTAATGAGTTTTGAACCAACTACCTGAGCGGGTCCGTTACGATCCGATTTTCACCTGATCTTACACTCACAGATAATAATGTTGTATACCAAAGCAACGCCGATGCCTGAACAGCTAACAAATAGTTTCTAAGCTCGACCTGACAATAGATAGCAGCTATTATGCCTTATTTCATTGTGATCATCTAGCGAAATTTGCACCAAACGACGAGAGATCTTTAATTTTTATGT 238 21292715 0.984718201 43 227 1827 0.95532646 1.489802286 0.18556701 0.18907563 0.336769759 238 5 8 278 X:21292660-21292935 6 CG1718 FBtr0306679|FBtr0306679|FBtr0306679 21292306|21292306|21292306 21293337|21293337|21293337 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 21292659 21292897 stop_codon CG1718 FlyBase G52191.1 CCTGCTAACTAATGAGTTTTGAACCAACTACCTGAGCGGGTCCGTTACGATCCGATTTTCACCTGATCTTACACTCACAGATAATAATGTTGTATACCAAAGCAACGCCGATGCCTGAACAGCTAACAAATAGTTTCTAAGCTCGACCTGACAATAGATAGCAGCTATTATGCCTTATTTCATTGTGATCATCTAGCGAAATTTGCACCAAACGACGAGAGATCTTTAATTTTTATGTA 168 21292715 0.984176359 41 155 1237 0.906015038 1.603865792 0.112781955 0.392857143 0.616541353 168 20 5 241 X:21292659-21292897 6 70 5854 FBgn0031170 761.1566667 13.58333333 20.66333333 0.091965298 5.153374233 3.387643168 1 1 1 0.01 dme-bantam-3p 6mer3-8 TGATCT X 21292829 21292834 - X_21292829_21292834_- 1 1 1 0 CG1718 FBtr0306679 21292306 21293337 X - 21292660 21292935 stop_codon CG1718 FlyBase G69408.1 TCCAGTCGCCTCTCGGAATTGAGGAAGCTGTGCAAGTGCCTGCTAACTAATGAGTTTTGAACCAACTACCTGAGCGGGTCCGTTACGATCCGATTTTCACCTGATCTTACACTCACAGATAATAATGTTGTATACCAAAGCAACGCCGATGCCTGAACAGCTAACAAATAGTTTCTAAGCTCGACCTGACAATAGATAGCAGCTATTATGCCTTATTTCATTGTGATCATCTAGCGAAATTTGCACCAAACGACGAGAGATCTTTAATTTTTATGT 238 21292834 0.984718201 43 227 1827 0.95532646 1.489802286 0.18556701 0.18907563 0.336769759 238 5 8 278 X:21292660-21292935 6 CG1718 FBtr0332489|FBtr0306679 21292712|21292306 21293337|21293337 TGATCT 6mer3-8 dme-bantam-3p X - 21292659 21292897 stop_codon CG1718 FlyBase G52191.1 CCTGCTAACTAATGAGTTTTGAACCAACTACCTGAGCGGGTCCGTTACGATCCGATTTTCACCTGATCTTACACTCACAGATAATAATGTTGTATACCAAAGCAACGCCGATGCCTGAACAGCTAACAAATAGTTTCTAAGCTCGACCTGACAATAGATAGCAGCTATTATGCCTTATTTCATTGTGATCATCTAGCGAAATTTGCACCAAACGACGAGAGATCTTTAATTTTTATGTA 168 21292834 0.984176359 41 155 1237 0.906015038 1.603865792 0.112781955 0.392857143 0.616541353 168 20 5 241 X:21292659-21292897 6 58.5 5855 FBgn0031170 761.1566667 13.58333333 20.66333333 0.076856714 4.306748466 2.831101791 0 0 0 0.01 dme-miR-932-5p 7mer-A1 GAATTGA X 21320206 21320212 - X_21320206_21320212_- 0.823349562 0.823349562 0.823349562 0 Dd FBtr0339624|FBtr0077226|FBtr0339623 21319789|21319789|21319789 21321321|21321321|21321321 X - 21320160 21320268 3'utr Dd FlyBase G69423.1 ATATAGGGAGTTTAGAGAGCCAAATCACTAATTATACGAGAACCGAGTTAGTCTGAGAATTGAGAAATCGTGGCACATCATCCGAAGCATCACAGGATATTCAGGATAT 27 21320221 0.957371287 8 25 116 0.9375 1.477121255 0.21875 0.148148148 0.28125 27 2 0 30 X:21320160-21320268 7 Dd FBtr0077226|FBtr0339623|FBtr0339624 21319789|21319789|21319789 21321321|21321321|21321321 GAATTGA 7mer-A1 dme-miR-932-5p X - 21320208 21320236 3'utr Dd FlyBase G52206.1 TATACGAGAACCGAGTTAGTCTGAGAATT 14 21320221 0.942868452 2 13 56 0.875 1.322219295 0.541666667 0.5 0.708333333 14 3 0 21 X:21320208-21320236 4 17.5 5856 FBgn0029067 2906.393333 121.66 187.2766667 0.006021208 0.143843498 0.093444636 9 9 9 0.01 dme-miR-184-5p 6mer3-8 TGATAA X 21320738 21320743 - X_21320738_21320743_- 1 1 1 0 Dd FBtr0339624|FBtr0077226|FBtr0339623 21319789|21319789|21319789 21321321|21321321|21321321 X - 21320697 21320835 3'utr Dd FlyBase G69425.1 ACATAAAGAACAAATTTGTCAAGTTATATATCATATTATTGTAATTTAAATCTAAGGCCACTTACAACAACAGTCTTGTAATTTCTATACCATGATAACAATTAACTATTATGACACTGGAGTTGTTTTTGTGCAGATA 14 21320773 0.9809572 10 12 97 0.823529412 1.146128036 0.117647059 0.214285714 0.352941176 14 3 0 14 X:21320697-21320835 6 Dd FBtr0077226|FBtr0339623|FBtr0339624 21319789|21319789|21319789 21321321|21321321|21321321 TGATAA 6mer3-8 dme-miR-184-5p X - 21320697 21320778 3'utr Dd FlyBase G52208.1 CCACTTACAACAACAGTCTTGTAATTTCTATACCATGATAACAATTAACTATTATGACACTGGAGTTGTTTTTGTGCAGATA 9 21320734 0.986888015 6 8 66 1 1.146128036 0 0.5 0.714285714 8 0 0 14 X:21320697-21320778 6 3.5 5857 FBgn0029067 2906.393333 121.66 187.2766667 0.001204242 0.0287687 0.018688927 30 -9 10.5 0.01 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT X 21321214 21321220 - X_21321214_21321220_- 0.620203316 0.620203982 0.620203649 4.95E-07 Dd FBtr0339624|FBtr0077226|FBtr0339623 21319789|21319789|21319789 21321321|21321321|21321321 X - 21321190 21321413 stop_codon Dd FlyBase G69428.2 TGTCGCTGCTGCCCATGCTGGATGCGCTGAGGTTCACGAACGACGTGAGATCGGTGCTGTCGAGGAACTTGCACCTGCACCGCCTCTGGTAGCAGGTGGGCCGCCTGTCGCTAGTTTAGTTTATCTATTTAGAAGGAGCACTGAGGGCCAGCGAAGTGGGGAGAATATCTTCTGAAATTAACAACAAACAAGGTGGTGCTGTGACACATTAACGAATTTGTTCA 202 21321219 0.952119205 22 191 893 0.954166667 1.514737442 0.058333333 0.163366337 0.295833333 202 5 6 229 X:21321190-21321413 7 Dd FBtr0077226|FBtr0339623|FBtr0339624 21319789|21319789|21319789 21321321|21321321|21321321 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" X - 21321191 21321259 3'utr Dd FlyBase G52211.2 AGTGGGGAGAATATCTTCTGAAATTAACAACAAACAAGGTGGTGCTGTGACACATTAACGAATTTGTTC 84 21321219 0.844775656 6 79 329 0.96124031 1.792391689 0.015503876 0.428571429 0.627906977 84 4 1 124 X:21321191-21321259 7 122.5 5858 FBgn0029067 2906.393333 121.66 187.2766667 0.042148459 1.006904488 0.654112454 -1 -1 -1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 21327635 21327641 + X_21327635_21327641_+ 0.823349562 0.823349562 0.823349562 0 CG1486 FBtr0077190|FBtr0077191 21327402|21327402 21328150|21328150 X + 21327617 21327664 3'utr CG1486 FlyBase G63379.1 ACTTAAACGAAAAGAATTCCAAAGAGGATGATTGTTCGCCCGAAAAGA 24 21327633 0.906556673 3 24 71 1 1.462397998 0.310344828 0.208333333 0.344827586 24 0 0 29 X:21327617-21327664 7 CG1486 FBtr0077190|FBtr0077191 21327402|21327402 21328150|21328150 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X + 21327621 21327658 3'utr CG1486 FlyBase G47785.1 AAACGAAAAGAATTCCAAAGAGGATGATTGTTCGCCCG 21 21327633 0.865720789 3 21 52 1 1.544068044 0.514285714 0.476190476 0.685714286 21 0 0 35 X:21327621-21327658 7 22.5 5859 FBgn0031174 458.93 15.08666667 23.13333333 0.049027085 1.49138312 0.972622478 2 2 2 0.01 dme-bantam-3p 6mer3-8 TGATCT X 21327734 21327739 + X_21327734_21327739_+ 1 1 1 0 CG1486 FBtr0077190|FBtr0077191 21327402|21327402 21328150|21328150 X + 21327670 21327765 3'utr CG1486 FlyBase G63380.1 AGATGATGATGATATGATCCAATTGAATTGCTTTTATGTATTTATATGTATATGGCTATTTCTATGATCTTTTATATATCTCCATTATATATTATA 72 21327734 0.994667713 8 69 949 0.967032967 1.944482672 0 0.180555556 0.351648352 72 3 0 88 X:21327670-21327765 6 CG1486 FBtr0077190|FBtr0077191 21327402|21327402 21328150|21328150 TGATCT 6mer3-8 dme-bantam-3p X + 21327719 21327750 3'utr CG1486 FlyBase G47786.1 ATATGGCTATTTCTATGATCTTTTATATATCT 31 21327734 0.706210673 5 30 374 0.95 1.579783597 0 0.258064516 0.425 31 2 0 38 X:21327719-21327750 6 50 5860 FBgn0031174 458.93 15.08666667 23.13333333 0.108949077 3.314184711 2.161383285 0 0 0 0.01 dme-miR-965-3p 7mer-m8 TACGCTT X 21327843 21327849 + X_21327843_21327849_+ 0.620204855 0.620204855 0.620204855 0 CG1486 FBtr0077190|FBtr0077191 21327402|21327402 21328150|21328150 X + 21327768 21327858 3'utr CG1486 FlyBase G63381.1 ATTTTACCTTATACTTTACTCCCACCATTATTGTTGATTATGATCAGAGGGAAATGTGCGTAACTTCGTCCTCTTTACGCTTTTATTTTTT 22 21327842 0.990855124 8 21 222 0.931034483 0.954242509 0.068965517 0.318181818 0.482758621 22 0 2 27 X:21327768-21327858 7 CG1486 FBtr0077190|FBtr0077191 21327402|21327402 21328150|21328150 TACGCTT 7mer-m8 dme-miR-965-3p X + 21327825 21327859 3'utr CG1486 FlyBase G47788.1 GCGTAACTTCGTCCTCTTTACGCTTTTATTTTTTT 9 21327842 0.824757672 4 9 99 1 1 0 0.111111111 0.2 9 0 0 10 X:21327825-21327859 7 12 5861 FBgn0031174 458.93 15.08666667 23.13333333 0.026147779 0.795404331 0.518731988 1 1 1 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 21327884 21327889 + X_21327884_21327889_+ 1 1 1 0 CG1486 FBtr0077190|FBtr0077191 21327402|21327402 21328150|21328150 X + 21327867 21327905 3'utr CG1486 FlyBase G63382.1 TAATTATTCAGATGCAAGTACCTTTGAGAGACATAATAT 47 21327891 0.822343857 2 47 241 1 1.832508913 0.352941176 0.276595745 0.5 47 0 0 68 X:21327867-21327905 6 CG1486 FBtr0077190|FBtr0077191 21327402|21327402 21328150|21328150 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X + 21327869 21327944 3'utr CG1486 FlyBase G47789.1 ATTATTCAGATGCAAGTACCTTTGAGAGACATAATATATATACATTTATATATATATAGGCAATTCTTCAATGTTC 38 21327891 0.829097737 6 38 207 1 1.799340549 0.253968254 0.473684211 0.682539683 38 0 0 63 X:21327869-21327944 6 40.5 5862 FBgn0031174 458.93 15.08666667 23.13333333 0.088248753 2.684489616 1.750720461 -7 -7 -7 0.01 dme-miR-1003-3p 7mer-m8 ATGTGAG X 21344406 21344412 + X_21344406_21344412_+ 0.671796207 0.671796207 0.671796207 0 fliI FBtr0077192 21344184 21345088 X + 21344387 21344427 3'utr fliI FlyBase G63401.1 GTCGAAGAGCACGCCTGCAATGTGAGTTTAGTTTTATGAAA 18 21344413 0.98872099 3 16 161 0.947368421 0.954242509 0.157894737 0.055555556 0.105263158 18 0 1 18 X:21344387-21344427 7 fliI FBtr0077192 21344184 21345088 ATGTGAG 7mer-m8 dme-miR-1003-3p X + 21344377 21344425 3'utr fliI FlyBase G47800.1 TTAACCAGAAGTCGAAGAGCACGCCTGCAATGTGAGTTTAGTTTTATGA 11 21344413 0.975215171 4 11 72 1 1.255272505 0.166666667 0.454545455 0.666666667 11 0 0 18 X:21344377-21344425 7 14.5 5863 FBgn0000709 400.18 10.03 15.43 0.036233695 1.445663011 0.939727803 -7 -7 -7 0.01 dme-miR-8-3p 6mer2-7 AGTATT X 21344801 21344806 + X_21344801_21344806_+ 1 1 1 0 fliI FBtr0077192 21344184 21345088 X + 21344790 21344862 3'utr fliI FlyBase G63404.1 CAAGAACGCCAAGTATTCGCCCACTCCCTGCGAGAAAACCACATGAGTATATTGAATGCAAATATACATACAT 19 21344805 0.916855791 6 19 89 1 1.278753601 0.157894737 0 0 19 0 0 19 X:21344790-21344862 6 fliI FBtr0077192 21344184 21345088 AGTATT 6mer2-7 dme-miR-8-3p X + 21344791 21344855 3'utr fliI FlyBase G47801.1 AAGAACGCCAAGTATTCGCCCACTCCCTGCGAGAAAACCACATGAGTATATTGAATGCAAATATA 8 21344805 0.937991028 4 8 36 1 1.230448921 0.294117647 0.75 0.882352941 8 0 0 17 X:21344791-21344855 6 10.5 5864 FBgn0000709 400.18 10.03 15.43 0.026238193 1.046859422 0.680492547 -4 -4 -4 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC X 21344955 21344960 + X_21344955_21344960_+ 1 1 1 0 fliI FBtr0077192 21344184 21345088 X + 21344907 21345041 3'utr fliI FlyBase G63405.1 ATATATATATATATACATACGCTGAGCTGAGAGGATTACTCCCCTGTGCTAGTCCTTTTAAAATGTTAACCTACTTAAAGCTAGCCTGTAATAAAGTCAAGGAAGCACTAAAACTAATTGTACAAATGCCCACGT 69 21344953 0.962612703 14 64 514 0.912087912 1.618048097 0.021978022 0.217391304 0.406593407 69 7 1 83 X:21344907-21345041 6 fliI FBtr0077192 21344184 21345088 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" X + 21344908 21344975 3'utr fliI FlyBase G47802.1 TATATATATATATACATACGCTGAGCTGAGAGGATTACTCCCCTGTGCTAGTCCTTTTAAAATGTTAA 41 21344953 0.894726351 6 37 323 0.936507937 1.293730757 0.031746032 0.414634146 0.619047619 41 2 2 59 X:21344908-21344975 6 43 5865 FBgn0000709 400.18 10.03 15.43 0.107451647 4.287138584 2.786779002 2 2 2 0.01 dme-miR-968-5p 8mer-A1 ACTACTTA X 21346812 21346819 + X_21346812_21346819_+ 0.637749242 0.632266915 0.635008079 0.003876572 dod FBtr0077193 21346430 21346858 X + 21346760 21346836 3'utr dod FlyBase G63411.1 AAAGGGAATCGCAATTAGGAATTGGAATCTGAGTGAAGCTGTTTACTTTGCGACTACTTATTTATTAGACTAAAGCT 13 21346808 0.991094785 7 11 114 0.857142857 1.079181246 0.142857143 0.076923077 0.142857143 13 2 0 12 X:21346760-21346836 8 dod FBtr0077193 21346430 21346858 ACTACTTA 8mer-A1 dme-miR-968-5p X + 21346755 21346834 3'utr dod FlyBase G47807.1 AAGGGAAAGGGAATCGCAATTAGGAATTGGAATCTGAGTGAAGCTGTTTACTTTGCGACTACTTATTTATTAGACTAAAG 9 21346782 0.984918386 5 9 76 1 1.079181246 0.416666667 0.222222222 0.416666667 9 0 0 12 X:21346755-21346834 8 6.5 5866 FBgn0015379 457.9566667 55.63 84.90666667 0.014193483 0.11684343 0.076554648 4 30 17 0.01 dme-miR-276a-3p 7mer-A1 GTTCCTA X 21354267 21354273 + X_21354267_21354273_+ 0.823349562 0.823349562 0.823349562 0 sol FBtr0089679 21354101 21357912 X + 21354243 21354291 3'utr sol FlyBase G63418.1 GTAAGATGTGGATATGCATCAAATGTTCCTATGCCTACAACCGACTCTG 25 21354266 0.782480123 3 25 182 1 1.462397998 0.172413793 0.12 0.24137931 25 0 0 29 X:21354243-21354291 7 sol FBtr0089679 21354101 21357912 GTTCCTA 7mer-A1 dme-miR-276a-3p X + 21354247 21354305 3'utr sol FlyBase G47814.1 GATGTGGATATGCATCAAATGTTCCTATGCCTACAACCGACTCTGGCTCCAGACTTGCG 13 21354266 0.760785556 6 13 84 1 1.255272505 0.277777778 0.307692308 0.5 13 0 0 18 X:21354247-21354305 7 17.5 5867 FBgn0003464 838.5366667 18.14666667 27.72333333 0.02086969 0.964364438 0.631237225 1 1 1 0.01 dme-bantam-3p 6mer3-8 TGATCT X 21355756 21355761 + X_21355756_21355761_+ 1 1 1 0 sol FBtr0089679 21354101 21357912 X + 21355729 21355784 3'utr sol FlyBase G63421.1 CGGCAAGTGGACGACGGTGCTGGTGGATGATCTGCTGCCATGCGACAAGCGTGGCC 13 21355756 0.721381707 3 12 81 0.928571429 1.113943352 0.428571429 0.076923077 0.142857143 13 1 0 13 X:21355729-21355784 6 sol FBtr0089679 21354101 21357912 TGATCT 6mer3-8 dme-bantam-3p X + 21355740 21355773 3'utr sol FlyBase G47817.1 CGACGGTGCTGGTGGATGATCTGCTGCCATGCGA 5 21355757 0.705691392 3 5 32 1 0.698970004 0.2 0 0 5 0 0 5 X:21355740-21355773 6 8.5 5868 FBgn0003464 838.5366667 18.14666667 27.72333333 0.010136706 0.468405584 0.306600938 0 -1 -0.5 0.01 dme-bantam-3p 6mer2-7 GATCTC X 21356356 21356361 + X_21356356_21356361_+ 1 1 1 0 sol FBtr0089679 21354101 21357912 X + 21356331 21356485 3'utr sol FlyBase G63424.1 ACGGCGCCAGCGAGGGCGTCTTCTGGATCTCGTTCGAGGATGTGCTTAACTACTTCGACTGCATCGATATCTGCAAGGTGCGCTCCGGCTGGAACGAGGTGCGTCTGCAGGGGACATTGCAGCCCCTGTGCTCCATCTCCTGTGTGCTGCTCACC 51 21356353 0.982537121 17 50 371 0.983606557 1.77815125 0.229508197 0.156862745 0.295081967 51 1 0 60 X:21356331-21356485 6 sol FBtr0089679 21354101 21357912 GATCTC 6mer2-7 dme-bantam-3p X + 21356336 21356418 3'utr sol FlyBase G47819.1 GCCAGCGAGGGCGTCTTCTGGATCTCGTTCGAGGATGTGCTTAACTACTTCGACTGCATCGATATCTGCAAGGTGCGCTCCGG 22 21356353 0.965645347 8 18 144 0.833333333 1.397940009 0.333333333 0.272727273 0.466666667 22 5 0 25 X:21356336-21356418 6 27 5869 FBgn0003464 838.5366667 18.14666667 27.72333333 0.03219895 1.487876561 0.973908861 3 3 3 0.01 dme-miR-307a-3p 8mer-A1 GGTTGTGA X 21357059 21357066 + X_21357059_21357066_+ 0.672403946 0.331600186 0.502002066 0.240984607 sol FBtr0089679 21354101 21357912 X + 21357033 21357130 intron-3'utr sol FlyBase G63427.1 TTTCCTTTACAGGGCTGGGCGGGTCTGGTTGTGATGGTGGAAAATAGACATGAGAATAAGTGGATCCATGTGAAATGTGATTGCCAGGAGAGCTACAA 96 21357058 0.956625751 10 91 551 0.947826087 1.736396502 0.460869565 0.166666667 0.304347826 96 5 1 109 X:21357033-21357130 8 sol FBtr0089679 21354101 21357912 GGTTGTGA 8mer-A1 dme-miR-307a-3p X + 21357043 21357140 intron-3'utr sol FlyBase G47823.1 AGGGCTGGGCGGGTCTGGTTGTGATGGTGGAAAATAGACATGAGAATAAGTGGATCCATGTGAAATGTGATTGCCAGGAGAGCTACAATGTGGTGTCG 67 21357058 0.962499778 12 63 370 0.933962264 1.217483944 0.5 0.432835821 0.641509434 67 2 5 99 X:21357043-21357140 8 45.5 5870 FBgn0003464 838.5366667 18.14666667 27.72333333 0.054261193 2.507347539 1.641216785 1 1 1 0.01 dme-miR-308-3p 7mer-m1 TGTGATT X 21357108 21357114 + X_21357108_21357114_+ 0.443131018 0.443131018 0.443131018 0 sol FBtr0089679 21354101 21357912 X + 21357033 21357130 intron-3'utr sol FlyBase G63427.1 TTTCCTTTACAGGGCTGGGCGGGTCTGGTTGTGATGGTGGAAAATAGACATGAGAATAAGTGGATCCATGTGAAATGTGATTGCCAGGAGAGCTACAA 96 21357114 0.956625751 10 91 551 0.947826087 1.736396502 0.460869565 0.166666667 0.304347826 96 5 1 109 X:21357033-21357130 7 sol FBtr0089679 21354101 21357912 TGTGATT 7mer-m1 dme-miR-308-3p X + 21357043 21357140 intron-3'utr sol FlyBase G47823.1 AGGGCTGGGCGGGTCTGGTTGTGATGGTGGAAAATAGACATGAGAATAAGTGGATCCATGTGAAATGTGATTGCCAGGAGAGCTACAATGTGGTGTCG 67 21357114 0.962499778 12 63 370 0.933962264 1.217483944 0.5 0.432835821 0.641509434 67 2 5 99 X:21357043-21357140 7 26.5 5871 FBgn0003464 838.5366667 18.14666667 27.72333333 0.031602673 1.460323292 0.955873512 -6 -6 -6 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 21357546 21357552 + X_21357546_21357552_+ 0.661608333 0.661613114 0.661610723 3.39E-06 sol FBtr0089679|FBtr0089678|FBtr0346608|FBtr0301583 21354101|21357433|21357433|21357433 21357912|21357912|21357912|21357912 X + 21357474 21357623 3'utr sol FlyBase G63430.1 TCGATGCTACCCCGCGATATGTCGCTGTTCGAATCCTGATTTGCATGCGTCTCCTCTCAATTCTACCCGTCTTCTAGTCGATGTTCTGTTAACGAATCACACATTACAGCGAAAAACCCAAAGTTGAAACCAATCAGCATGCGAAACAAT 185 21357545 0.986891627 17 178 1548 0.973333333 2.039414119 0.426666667 0.189189189 0.333333333 185 5 1 219 X:21357474-21357623 7 sol FBtr0346608|FBtr0301583|FBtr0089679|FBtr0089678 21357433|21357433|21354101|21357433 21357912|21357912|21357912|21357912 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X + 21357493 21357618 3'utr sol FlyBase G47825.1 TGTCGCTGTTCGAATCCTGATTTGCATGCGTCTCCTCTCAATTCTACCCGTCTTCTAGTCGATGTTCTGTTAACGAATCACACATTACAGCGAAAAACCCAAAGTTGAAACCAATCAGCATGCGAA 124 21357545 0.985303176 14 119 977 0.965517241 1.526339277 0.390804598 0.298387097 0.5 124 2 4 168 X:21357493-21357618 7 132.5 5872 FBgn0003464 838.5366667 18.14666667 27.72333333 0.158013365 7.301616458 4.77936756 1 1 1 0.01 dme-miR-317-3p 6mer3-8 TGTGTT X 21357795 21357800 + X_21357795_21357800_+ 0.93532724 0.999306469 0.967316854 0.045240197 sol FBtr0089679|FBtr0089678|FBtr0346608|FBtr0301583 21354101|21357433|21357433|21357433 21357912|21357912|21357912|21357912 X + 21357732 21357862 3'utr sol FlyBase G63431.1 AGAAGCCCCAGTCCGGAGTCCTAAGGCTAAGGCTCGGCACGATTCGCTTGAGATCCAATGATCTGTGTTTTGATTAGAGCGGCTATGATTGTGGATTATATAGATATGTATTGTGAATTTAAGTGCATCCA 67 21357820 0.90878523 18 63 516 0.939759036 1.892094603 0.180722892 0.164179104 0.325301205 67 5 0 78 X:21357732-21357862 6 sol FBtr0346608|FBtr0301583|FBtr0089679|FBtr0089678 21357433|21357433|21354101|21357433 21357912|21357912|21357912|21357912 TGTGTT 6mer3-8 dme-miR-317-3p X + 21357735 21357851 3'utr sol FlyBase G47826.1 AGCCCCAGTCCGGAGTCCTAAGGCTAAGGCTCGGCACGATTCGCTTGAGATCCAATGATCTGTGTTTTGATTAGAGCGGCTATGATTGTGGATTATATAGATATGTATTGTGAATTT 41 21357820 0.893842273 14 37 306 0.911764706 1.792391689 0.102941176 0.390243902 0.632352941 41 6 0 62 X:21357735-21357851 6 15.5 5873 FBgn0003464 838.5366667 18.14666667 27.72333333 0.018484582 0.854151359 0.559095828 -25 -25 -25 0.01 dme-miR-317-3p 6mer3-8 TGTGTT X 21361347 21361352 + X_21361347_21361352_+ 1 1 1 0 1-Sep FBtr0077198 21360837 21361688 X + 21361184 21361381 3'utr 1-Sep FlyBase G63439.1 CTTCTATCAAGCGAAACCACACACGAAAACAATTGTATTCCTATTATGTATTTAGACGCGATTAACAATGAATTATTATTGTAATACGCATCTAGGCTAAGCGAATCCAATCCGATTTATATTGTATGTTAATTCATTTTTGTCTGTTTACCTTACCCTTATCTGTGTTGTCTCAAAGCGAGCAATTTATTTAGGTTA 115 21361336 0.990917614 28 107 1107 0.9375 1.829303773 0.215277778 0.208695652 0.368055556 115 8 1 135 X:21361184-21361381 6 1-Sep FBtr0077198 21360837 21361688 TGTGTT 6mer3-8 dme-miR-317-3p X + 21361320 21361370 3'utr 1-Sep FlyBase G47833.1 TTTTTGTCTGTTTACCTTACCCTTATCTGTGTTGTCTCAAAGCGAGCAATT 52 21361336 0.835280442 10 46 498 0.894736842 1.355387658 0.157894737 0.365384615 0.565789474 52 6 2 68 X:21361320-21361370 6 51.5 5874 FBgn0011710 1695 101.9 156.09 0.030383481 0.505397448 0.329937856 11 11 11 0.01 dme-miR-14-3p 6mer3-8 AAGACT X 21361626 21361631 + X_21361626_21361631_+ 1 1 1 0 1-Sep FBtr0077198 21360837 21361688 X + 21361563 21361654 3'utr 1-Sep FlyBase G63442.1 AGTGCACTCCTTTAACGGATGAAACAAAAACCAAAATGTGAAATCTCTTTTATTATGTATATGAAGACTTTTTTAACTCAATATAATCCTCT 122 21361633 0.782023511 16 117 1052 0.960784314 1.866287339 0.039215686 0.229508197 0.385620915 122 5 1 147 X:21361563-21361654 6 1-Sep FBtr0077198 21360837 21361688 AAGACT 6mer3-8 dme-miR-14-3p X + 21361483 21361646 3'utr 1-Sep FlyBase G47835.1 AAACAGTGATCCCTTCCTAGGCGGTCCCGGGAACCCATGGCCAGTTGCGGAAACTCGGTTTAGCAGGCTACTCGCTTAAAAGTGCACTCCTTTAACGGATGAAACAAAAACCAAAATGTGAAATCTCTTTTATTATGTATATGAAGACTTTTTTAACTCAATAT 84 21361633 0.983699791 21 83 681 0.991452991 2.064457989 0.153846154 0.321428571 0.512820513 84 1 0 116 X:21361483-21361646 6 65.5 5875 FBgn0011710 1695 101.9 156.09 0.038643068 0.642787046 0.419629701 -7 -7 -7 0.01 dme-bantam-3p 6mer3-8 TGATCT X 21372780 21372785 + X_21372780_21372785_+ 1 1 1 0 bbx FBtr0100598|FBtr0331745|FBtr0331744|FBtr0100599 21372235|21372235|21372235|21372235 21373145|21373145|21373145|21373145 X + 21372731 21372809 3'utr bbx FlyBase G63465.1 AAGCTATTTGCTGGTGGTGCCCAATGGAGATGGAAAAACAGACATTCGTTGATCTACAATTTAGTCAATAATATTATGT 267 21372780 0.764075045 10 258 2169 0.969512195 2.50242712 0.021341463 0.164794007 0.320121951 267 10 0 318 X:21372731-21372809 6 bbx FBtr0331744|FBtr0100599|FBtr0100598|FBtr0331745 21372235|21372235|21372235|21372235 21373145|21373145|21373145|21373145 TGATCT 6mer3-8 dme-bantam-3p X + 21372739 21372805 3'utr bbx FlyBase G47850.1 TGCTGGTGGTGCCCAATGGAGATGGAAAAACAGACATTCGTTGATCTACAATTTAGTCAATAATATT 214 21372780 0.983319811 8 209 1645 0.98245614 2.225309282 0.035087719 0.406542056 0.628654971 214 5 1 336 X:21372739-21372805 6 235.5 5876 FBgn0024251 1081.59 31.92333333 49.23333333 0.217735001 7.37704918 4.783344617 0 0 0 0.01 dme-miR-305-3p 6mer2-7 TGTGCC X 21384550 21384555 + X_21384550_21384555_+ 1 0.999938486 0.999969243 4.35E-05 slgA FBtr0307529|FBtr0077204|FBtr0307527|FBtr0077207|FBtr0077210|FBtr0307526|FBtr0077206|FBtr0077205|FBtr0307524|FBtr0307525|FBtr0077208|FBtr0077209 21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904 21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159 X + 21384536 21384562 3'utr slgA FlyBase G63473.1 ATTAACTTCGTGATTGTGCCTGTTCCT 9 21384550 0.708698496 4 8 79 1 0.954242509 0 0 0 9 0 0 9 X:21384536-21384562 6 slgA FBtr0077205|FBtr0307524|FBtr0077208|FBtr0307525|FBtr0077209|FBtr0307529|FBtr0077206|FBtr0077204|FBtr0077210|FBtr0077207|FBtr0307527|FBtr0307526 21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904 21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159 TGTGCC 6mer2-7 dme-miR-305-3p X + 21384511 21384573 3'utr slgA FlyBase G47859.1 TATGGCTGCATTTTAGTCTAGATTCATTAACTTCGTGATTGTGCCTGTTCCTCAGTATCAGTT 11 21384551 0.986943706 4 11 100 1 1.278753601 0.210526316 0.363636364 0.631578947 11 0 0 19 X:21384511-21384573 6 9.5 5877 FBgn0003423 397.6533333 14.53333333 22.43333333 0.023890156 0.653669725 0.423476969 0 -1 -0.5 0.01 dme-miR-305-5p 8mer-m1 AGTACAAT X 2148722 2148729 - X_2148722_2148729_- 0.570363044 0.570363044 0.570363044 0 bcn92 FBtr0070431 2148461 2148765 X - 2148706 2148744 3'utr bcn92 FlyBase G64283.1 GCGCTAGCTGAAGAGAGTACAATAGCAGGGAAGGAGCGG 6 2148722 0.918938909 2 6 15 1 0.84509804 0.714285714 0.166666667 0.285714286 6 0 0 7 X:2148706-2148744 8 bcn92 FBtr0070431 2148461 2148765 AGTACAAT 8mer-m1 dme-miR-305-5p X - 2148703 2148744 3'utr bcn92 FlyBase G48466.1 GCGCTAGCTGAAGAGAGTACAATAGCAGGGAAGGAGCGGTAG 7 2148722 0.989125333 2 7 14 1 0.954242509 0.555555556 0.285714286 0.444444444 7 0 0 9 X:2148703-2148744 8 6 5878 FBgn0013432 536.3433333 92.97666667 143.49 0.011186864 0.06453232 0.041814761 -7 -7 -7 0.01 dme-miR-980-3p 7mer-A1 GCAGCTA X 2150460 2150466 - X_2150460_2150466_- 0.823349562 0.823349562 0.823349562 0 wapl FBtr0070430|FBtr0344159|FBtr0070429 2150105|2149934|2150105 2150876|2150876|2150876 X - 2150437 2150477 3'utr wapl FlyBase G64288.1 AAGCAATATTAGCAGCTAAATGTCGGCTTACCCTCGAAAGC 15 2150449 0.696462347 5 13 78 0.761904762 1.204119983 0 0.333333333 0.523809524 15 5 0 16 X:2150437-2150477 7 wapl FBtr0070430|FBtr0344159|FBtr0070429 2150105|2149934|2150105 2150876|2150876|2150876 GCAGCTA 7mer-A1 dme-miR-980-3p X - 2150437 2150488 3'utr wapl FlyBase G48468.1 TATATAGTCATAAGCAATATTAGCAGCTAAATGTCGGCTTACCCTCGAAAGC 9 2150468 0.954417298 4 9 43 1 1.041392685 0.181818182 0.222222222 0.363636364 9 0 0 11 X:2150437-2150488 7 9.5 5879 FBgn0004655 814.8266667 14.46333333 22.20666667 0.011658921 0.656833372 0.42779946 -17 2 -7.5 0.01 dme-miR-995-5p 6mer3-8 AATTCG X 21609468 21609473 - X_21609468_21609473_- 1 1 1 0 CG33502 FBtr0070055 21609355 21609507 X - 21609442 21609481 3'utr CG33502 FlyBase G69494.1 ACGTTGCTAATTCGCTAGTGAAACCAATAGTTAGTTGTAT 5 21609472 0.982349635 3 4 30 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 X:21609442-21609481 6 CG33502 FBtr0070055 21609355 21609507 AATTCG 6mer3-8 dme-miR-995-5p X - 21609386 21609479 3'utr CG33502 FlyBase G52266.1 GTTGCTAATTCGCTAGTGAAACCAATAGTTAGTTGTATACATAACGTACATGTAGTTGATTACTTAAATAAATCTACGGCTTTAAGCTTAACCG 12 21609451 0.980143517 5 11 83 0.958333333 1.361727836 0.208333333 0.666666667 0.833333333 12 1 0 23 X:21609386-21609479 6 6 5880 FBgn0053502 0.98 0.11 0.166666667 6.12244898 54.54545455 36 -1 -22 -11.5 0.01 dme-miR-995-5p 6mer3-8 AATTCG X 21615560 21615565 - X_21615560_21615565_- 1 1 1 0 CG32857 FBtr0070052 21615447 21615599 X - 21615531 21615573 3'utr CG32857 FlyBase G69499.1 ACGTTGCTAATTCGCTAGTGAAACCAATAGTTAGTTGTATACA 8 21615565 0.643737182 6 8 54 1 0.903089987 0.125 0 0 8 0 0 8 X:21615531-21615573 6 CG32857 FBtr0070052 21615447 21615599 AATTCG 6mer3-8 dme-miR-995-5p X - 21615524 21615584 3'utr CG32857 FlyBase G52269.1 TTTCCCTGCTTACGTTGCTAATTCGCTAGTGAAACCAATAGTTAGTTGTATACATAACGTA 7 21615563 0.984990333 3 6 51 0.857142857 1.079181246 0 0.714285714 0.857142857 7 2 0 12 X:21615524-21615584 6 6 5881 FBgn0052857 214.41 24.80666667 37.58333333 0.027983769 0.241870465 0.159645233 0 -2 -1 0.01 dme-miR-995-5p 6mer3-8 AATTCG X 21621652 21621657 - X_21621652_21621657_- 1 1 1 0 CG32500 FBtr0077374 21621539 21621691 X - 21621615 21621669 3'utr CG32500 FlyBase G69504.1 GCTTACGTTGCTAATTCGCTAGTGAAACCAATAGTTAGTTGTATACATAACGTAC 8 21621656 0.98132456 4 8 58 1 1.041392685 0.090909091 0.375 0.545454545 8 0 0 11 X:21621615-21621669 6 CG32500 FBtr0077374 21621539 21621691 AATTCG 6mer3-8 dme-miR-995-5p X - 21621594 21621663 3'utr CG32500 FlyBase G52273.1 GTTGCTAATTCGCTAGTGAAACCAATAGTTAGTTGTATACATAACGTACATGTAGTTGATTACTTAAATA 6 21621635 0.984965601 5 5 46 0.8 0.903089987 0.1 0.333333333 0.6 6 2 0 8 X:21621594-21621663 6 5 5882 FBgn0052500 0 0 0 Inf Inf Inf -1 -22 -11.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 2205283 2205288 + X_2205283_2205288_+ 1 1 1 0 Mct1 FBtr0070393|FBtr0342765 2204927|2204927 2205373|2205373 X + 2205267 2205375 3'utr Mct1 FlyBase G58288.1 ACGTACATGTACCCATACCAAATTATTGTTATTCTATTATGACTGTATGCCTGTGCGTGTGTGTCCGTCTGTGTATGCGCCATTAAAGAAAGCTTTTGTACAACAACAG 123 2205312 0.930149214 23 108 1136 0.884892086 1.788875116 0.302158273 0.113821138 0.215827338 123 15 1 123 X:2205267-2205375 6 Mct1 FBtr0070393|FBtr0342765 2204927|2204927 2205373|2205373 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 2205257 2205376 3'utr Mct1 FlyBase G44099.1 GTATGCCTACACGTACATGTACCCATACCAAATTATTGTTATTCTATTATGACTGTATGCCTGTGCGTGTGTGTCCGTCTGTGTATGCGCCATTAAAGAAAGCTTTTGTACAACAACAGA 61 2205312 0.971370409 18 53 532 0.893617021 1.62324929 0.329787234 0.360655738 0.585106383 61 9 1 84 X:2205257-2205376 6 21 5883 FBgn0023549 120.6466667 4.866666667 7.343333333 0.174061999 4.315068493 2.859736723 -29 -29 -29 0.01 dme-miR-305-3p 6mer3-8 ATGTGC X 2214802 2214807 - X_2214802_2214807_- 1 1 1 0 Vinc FBtr0342771|FBtr0070420|FBtr0342770 2214345|2214345|2214345 2215014|2215014|2215014 X - 2214766 2214810 3'utr Vinc FlyBase G64322.1 ATTATGTGCTCCAAGAACTTGTGCTCATGTCCCCGCCCCCGCCTT 18 2214792 0.813907565 4 18 108 1 1.278753601 0.315789474 0.055555556 0.105263158 18 0 0 19 X:2214766-2214810 6 Vinc FBtr0342771|FBtr0070420|FBtr0342770 2214345|2214345|2214345 2215014|2215014|2215014 ATGTGC 6mer3-8 dme-miR-305-3p X - 2214757 2214808 3'utr Vinc FlyBase G48486.1 TATGTGCTCCAAGAACTTGTGCTCATGTCCCCGCCCCCGCCTTCGTGCCCCC 8 2214791 0.978545001 5 8 53 1 1.113943352 0.153846154 0.5 0.692307692 8 0 0 13 X:2214757-2214808 6 6.5 5884 FBgn0004397 539.1433333 17.13666667 26.22333333 0.012056163 0.379303637 0.247870853 -15 -16 -15.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 2237105 2237110 + X_2237105_2237110_+ 1 1 1 0 pcx FBtr0342766|FBtr0332381|FBtr0344153 2236594|2236594|2236594 2238045|2238045|2237961 X + 2237064 2237159 3'utr pcx FlyBase G58318.1 AATTGTTGTAACTTGCGAATTGTATAATATGGAAACGGAAAACCAAATGCTTCTCAAACATTACCTATTTTGTTCTTTCTCCTCTCGCTAGCCAAT 24 2237111 0.969194783 7 23 142 1 1.505149978 0.03125 0.304347826 0.5 23 0 0 32 X:2237064-2237159 6 pcx FBtr0344153|FBtr0342766|FBtr0332381 2236594|2236594|2236594 2237961|2238045|2238045 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 2237099 2237133 3'utr pcx FlyBase G44115.1 CGGAAAACCAAATGCTTCTCAAACATTACCTATTT 11 2237111 0.972720594 3 10 54 0.866666667 1.113943352 0.266666667 0.272727273 0.466666667 11 2 0 13 X:2237099-2237133 6 12 5885 FBgn0003048 2230.713333 22.34666667 34.36666667 0.005379445 0.53699284 0.349175558 -6 -6 -6 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 2237260 2237265 + X_2237260_2237265_+ 0.999998714 0.967261888 0.983630301 0.023148413 pcx FBtr0342766|FBtr0332381|FBtr0344153 2236594|2236594|2236594 2238045|2238045|2237961 X + 2237241 2237276 3'utr pcx FlyBase G58319.1 ACACACAGACACAAAACATACCAAATTCGATTGTTA 7 2237259 0.906633057 3 7 23 1 0.84509804 0.285714286 0 0 7 0 0 7 X:2237241-2237276 6 pcx FBtr0344153|FBtr0342766|FBtr0332381 2236594|2236594|2236594 2237961|2238045|2238045 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 2237188 2237279 3'utr pcx FlyBase G44116.1 TTATAAATGTATATTTAACGGAAATTAGTTTAAAGTTAAAGTTAATGAACCCCACACACAGACACAAAACATACCAAATTCGATTGTTAAAG 12 2237259 0.968702472 7 9 54 0.75 0.77815125 0.1875 0.333333333 0.5 12 3 1 12 X:2237188-2237279 6 6.5 5886 FBgn0003048 2230.713333 22.34666667 34.36666667 0.002913866 0.290871122 0.18913676 1 1 1 0.01 dme-miR-14-3p 7mer-A1 AGACTGA X 2237462 2237468 + X_2237462_2237468_+ 0.823349562 0.823349562 0.823349562 0 pcx FBtr0342766|FBtr0332381|FBtr0344153 2236594|2236594|2236594 2238045|2238045|2237961 X + 2237358 2237517 3'utr pcx FlyBase G58321.1 CTAAGATATTACACACAATTCCTAGATGATTAAGAGGATGAGGATGAGGACGAGGATCAAGTGGAATGACGACATGTAAAGCTCTCACGTTGCCTTAATATATTAGACTGATTTTTTCTACACACATTTGTAGACGTATGGTGGATGACATTTGAGAAGT 305 2237460 0.992172243 30 298 3345 0.977591036 2.241795431 0.019607843 0.144262295 0.268907563 305 7 1 349 X:2237358-2237517 7 pcx FBtr0344153|FBtr0342766|FBtr0332381 2236594|2236594|2236594 2237961|2238045|2238045 AGACTGA 7mer-A1 dme-miR-14-3p X + 2237398 2237514 3'utr pcx FlyBase G44118.1 AGGATGAGGACGAGGATCAAGTGGAATGACGACATGTAAAGCTCTCACGTTGCCTTAATATATTAGACTGATTTTTTCTACACACATTTGTAGACGTATGGTGGATGACATTTGAGA 142 2237460 0.991576035 18 137 1481 0.97235023 2.02325246 0.02764977 0.366197183 0.585253456 142 5 1 211 X:2237398-2237514 7 194.5 5887 FBgn0003048 2230.713333 22.34666667 34.36666667 0.08719184 8.70375895 5.659553831 2 2 2 0.01 dme-miR-1012-3p 6mer3-8 TTGACT X 22447570 22447575 - X_22447570_22447575_- 0.999882468 0.792424863 0.896153665 0.146694676 CG14615 FBtr0339499 22447181 22447925 X - 22447543 22447583 3'utr CG14615 FlyBase G69539.1 ACGCACTTTTGACTGAATCAAATTTGACATTTTCGAGTTAA 7 22447560 0.775937663 3 6 46 0.9 0.954242509 0.1 0.428571429 0.6 7 1 0 9 X:22447543-22447583 6 CG14615 FBtr0339499 22447181 22447925 TTGACT 6mer3-8 dme-miR-1012-3p X - 22447534 22447589 3'utr CG14615 FlyBase G52298.1 TATATTACGCACTTTTGACTGAATCAAATTTGACATTTTCGAGTTAATTAGCTAAA 16 22447576 0.984620951 5 14 115 0.913043478 1.322219295 0.130434783 0.25 0.47826087 16 2 0 21 X:22447534-22447589 6 9.5 5888 FBgn0031184 46.76333333 3.326666667 5.086666667 0.203150617 2.855711423 1.867627785 -15 1 -7 0.01 dme-miR-33-5p 8mer-A1 CAATGCAA X 22447609 22447616 + X_22447609_22447616_+ 0.634521408 0.634437372 0.63447939 5.94E-05 CG14621 FBtr0339557 22446988 22447808 X + 22447562 22447635 3'utr CG14621 FlyBase G63513.1 TTTGATTCAGTCAAAAGTGCGTAATATATGTATATATACCTAGAATGCAATGCAATGCTGTAAATAAAATGTAT 14 22447617 0.890200114 5 12 104 0.928571429 1.113943352 0.214285714 0 0 14 1 0 13 X:22447562-22447635 8 CG14621 FBtr0339557 22446988 22447808 CAATGCAA 8mer-A1 dme-miR-33-5p X + 22447549 22447626 3'utr CG14621 FlyBase G47882.1 CGAAAATGTCAAATTTGATTCAGTCAAAAGTGCGTAATATATGTATATATACCTAGAATGCAATGCAATGCTGTAAAT 13 22447608 0.974828724 7 12 76 1 1.380211242 0.208333333 0.461538462 0.708333333 13 0 0 24 X:22447549-22447626 8 9 5889 FBgn0031183 252.9033333 14.79333333 22.64 0.03558672 0.608382154 0.397526502 -8 1 -3.5 0.01 dme-miR-1007-3p 8mer-A1 TGAGCTTA X 2244821 2244828 + X_2244821_2244828_+ 0.625363359 0.625363359 0.625363359 0 fs(1)K10 FBtr0070396 2244551 2246041 X + 2244791 2244828 3'utr fs(1)K10 FlyBase G58328.1 TTGTCACACGTTGCTTTTGCGACTGAGAACTGAGCTTA 5 2244814 0.955687275 2 5 41 1 0.698970004 0 0 0 5 0 0 5 X:2244791-2244828 8 fs(1)K10 FBtr0070396 2244551 2246041 TGAGCTTA 8mer-A1 dme-miR-1007-3p X + 2244798 2244832 3'utr fs(1)K10 FlyBase G44119.1 ACGTTGCTTTTGCGACTGAGAACTGAGCTTAGAAC 8 2244812 0.817967302 3 6 45 0.666666667 0.903089987 0 0.375 0.583333333 8 4 0 8 X:2244798-2244832 8 5.5 5890 FBgn0000810 232.2533333 9.176666667 14.05666667 0.023681038 0.599346168 0.391273417 7 9 8 0.01 dme-miR-965-3p 6mer3-8 TACGCT X 22451815 22451820 - X_22451815_22451820_- 1 1 1 0 wap FBtr0309240|FBtr0339498|FBtr0305147 22451554|22451443|22451554 22453229|22453229|22453229 X - 22451767 22451881 3'utr wap FlyBase G69543.1 TGCTGCAGAAGAGTAAGAAACTGAAATCAAGTCTATGGAATTTGGAATTGGATATATTTTATACGCTCGTAGCCACTAGGCGAAGACATTTTCATTAATTTGGCAAACCACGGTT 10 22451850 0.970980085 9 10 63 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 X:22451767-22451881 6 wap FBtr0305147|FBtr0309240|FBtr0339498 22451554|22451554|22451443 22453229|22453229|22453229 TACGCT 6mer3-8 dme-miR-965-3p X - 22451779 22451866 3'utr wap FlyBase G52301.1 AGAAACTGAAATCAAGTCTATGGAATTTGGAATTGGATATATTTTATACGCTCGTAGCCACTAGGCGAAGACATTTTCATTAATTTGG 6 22451812 0.97146742 6 6 46 1 0.954242509 0.333333333 0.5 0.666666667 6 0 0 9 X:22451779-22451866 6 3 5891 FBgn0266848 2356.2 87.30666667 134.59 0.001273237 0.034361637 0.022289918 30 -8 11 0.01 dme-miR-184-5p 7mer-A1 GATAAGA X 22452192 22452198 - X_22452192_22452198_- 0.782911824 0.782911824 0.782911824 0 wap FBtr0309240|FBtr0339498|FBtr0305147|FBtr0077368 22451554|22451443|22451554|22451998 22453229|22453229|22453229|22453229 X - 22452164 22452222 3'utr wap FlyBase G69546.1 AGCAAACAAACTATGATCATTTCAGATAAGACACGACCCTCCATCAATAATCTCAAATC 10 22452209 0.965462633 5 10 53 1 1.079181246 0.083333333 0.2 0.333333333 10 0 0 12 X:22452164-22452222 7 wap FBtr0305147|FBtr0077368|FBtr0309240|FBtr0339498 22451554|22451998|22451554|22451443 22453229|22453229|22453229|22453229 GATAAGA 7mer-A1 dme-miR-184-5p X - 22452164 22452219 3'utr wap FlyBase G52303.1 AAACAAACTATGATCATTTCAGATAAGACACGACCCTCCATCAATAATCTCAAATC 6 22452209 0.973455655 5 6 34 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 X:22452164-22452219 7 5 5892 FBgn0266848 2356.2 87.30666667 134.59 0.002122061 0.057269395 0.037149863 11 11 11 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA X 22452358 22452363 - X_22452358_22452363_- 1 1 1 0 wap FBtr0309240|FBtr0339498|FBtr0305147|FBtr0077368 22451554|22451443|22451554|22451998 22453229|22453229|22453229|22453229 X - 22452334 22452419 3'utr wap FlyBase G69548.1 AAAGAAATAAGCGAAATACTTACATAGATTAAAGATTAAAAACCAAACCAGGAAACTGATGACGAACTGCACACAACACAGCTAGA 6 22452360 0.864535792 5 5 19 1 0.77815125 0.166666667 0 0 6 0 0 6 X:22452334-22452419 6 wap FBtr0305147|FBtr0077368|FBtr0309240|FBtr0339498 22451554|22451998|22451554|22451443 22453229|22453229|22453229|22453229 TGATGA 6mer3-8 dme-miR-2a-2-5p X - 22452341 22452370 3'utr wap FlyBase G52305.1 AGGAAACTGATGACGAACTGCACACAACAC 5 22452361 0.750575869 3 5 10 1 1 0 0.4 0.7 5 0 0 10 X:22452341-22452370 6 4 5893 FBgn0266848 2356.2 87.30666667 134.59 0.001697649 0.045815516 0.02971989 -3 -2 -2.5 0.01 dme-miR-282-5p 6mer3-8 AGAGGC X 22452983 22452988 - X_22452983_22452988_- 0.999999601 0.999894216 0.999946908 7.45E-05 wap FBtr0309240|FBtr0339498|FBtr0305147|FBtr0077368 22451554|22451443|22451554|22451998 22453229|22453229|22453229|22453229 X - 22452959 22453024 3'utr wap FlyBase G69551.1 CTGTCGAGAGAGAGAAAATGTGAAAGTGACGGATATAGAGGCAGAGAAATGGAAAGAGAAAGGGCT 32 22452989 0.913808049 6 30 85 0.911764706 1.190331698 0.294117647 0.0625 0.117647059 32 2 1 31 X:22452959-22453024 6 wap FBtr0305147|FBtr0077368|FBtr0309240|FBtr0339498 22451554|22451998|22451554|22451443 22453229|22453229|22453229|22453229 AGAGGC 6mer3-8 dme-miR-282-5p X - 22452955 22453028 3'utr wap FlyBase G52308.1 CTGTCTGTCGAGAGAGAGAAAATGTGAAAGTGACGGATATAGAGGCAGAGAAATGGAAAGAGAAAGGGCTTAAA 13 22452989 0.929353033 8 12 41 0.9375 1.176091259 0.375 0.153846154 0.3125 13 1 0 15 X:22452955-22453028 6 13.5 5894 FBgn0266848 2356.2 87.30666667 134.59 0.005729565 0.154627367 0.100304629 1 1 1 0.01 dme-miR-1007-3p 8mer-A1 TGAGCTTA X 22453076 22453083 - X_22453076_22453083_- 0.625363359 0.625363359 0.625363359 0 wap FBtr0309240|FBtr0339498|FBtr0305147|FBtr0077368 22451554|22451443|22451554|22451998 22453229|22453229|22453229|22453229 X - 22453072 22453124 3'utr wap FlyBase G69552.1 AAACATACATTTGCTGTTGGTAACTTGGAAGCGGAAAGCAGTGAGCTTAAGTT 8 22453083 0.995677346 3 8 45 1 0.954242509 0.111111111 0.125 0.222222222 8 0 0 9 X:22453072-22453124 8 wap FBtr0305147|FBtr0077368|FBtr0309240|FBtr0339498 22451554|22451998|22451554|22451443 22453229|22453229|22453229|22453229 TGAGCTTA 8mer-A1 dme-miR-1007-3p X - 22453064 22453127 3'utr wap FlyBase G52309.1 AATAAACATACATTTGCTGTTGGTAACTTGGAAGCGGAAAGCAGTGAGCTTAAGTTGGATTAGT 6 22453113 0.969884622 4 6 39 1 1 0 0.333333333 0.6 6 0 0 10 X:22453064-22453127 8 3.5 5895 FBgn0266848 2356.2 87.30666667 134.59 0.001485443 0.040088577 0.026004904 0 30 15 0.01 dme-miR-14-3p 6mer3-8 AAGACT X 2245896 2245901 + X_2245896_2245901_+ 1 1 1 0 fs(1)K10 FBtr0070396 2244551 2246041 X + 2245852 2245917 3'utr fs(1)K10 FlyBase G58331.1 AACCCTCAGGTAGCAAAGTAATTTAATTGCAAATAGAGAGTCCTAAGACTAAATAATATATTTAAA 23 2245894 0.856266736 6 16 146 0.730769231 0.801632346 0 0.130434783 0.230769231 23 5 2 19 X:2245852-2245917 6 fs(1)K10 FBtr0070396 2244551 2246041 AAGACT 6mer3-8 dme-miR-14-3p X + 2245876 2245908 3'utr fs(1)K10 FlyBase G44121.1 AATTGCAAATAGAGAGTCCTAAGACTAAATAAT 11 2245895 0.732514331 3 7 60 0.692307692 0.954242509 0 0.181818182 0.307692308 11 4 0 9 X:2245876-2245908 6 15.5 5896 FBgn0000810 232.2533333 9.176666667 14.05666667 0.066737471 1.689066473 1.10267963 2 1 1.5 0.01 dme-miR-7-5p 6mer3-8 GTCTTC X 22467461 22467466 + X_22467461_22467466_+ 1 1 1 0 CG14619 FBtr0339508 22466192 22468475 X + 22467407 22467532 3'utr CG14619 FlyBase G63529.1 CGGTAACACCAGCGTCACCTTTGATCCGTTCTGGGATCTGAGTGTACCGTTGCCGTCTTCGTCCCGCTGCAAGCTAGAAGCTTGCCTCGACCTCTTTATCCGCGAAGAGGTCCTTGACGGCGACGA 14 22467464 0.959720941 10 14 71 1 1.255272505 0.277777778 0.285714286 0.444444444 14 0 0 18 X:22467407-22467532 6 CG14619 FBtr0339508 22466192 22468475 GTCTTC 6mer3-8 dme-miR-7-5p X + 22467416 22467481 3'utr CG14619 FlyBase G47889.1 CAGCGTCACCTTTGATCCGTTCTGGGATCTGAGTGTACCGTTGCCGTCTTCGTCCCGCTGCAAGCT 8 22467464 0.97667182 6 7 48 1 1.113943352 0.230769231 0.5 0.692307692 8 0 0 13 X:22467416-22467481 6 5 5897 FBgn0031187 1740.476667 50.81666667 78.19 0.002872776 0.098392916 0.063946796 -3 -3 -3 0.01 dme-miR-79-3p 6mer2-7 AGCTTT X 22469006 22469011 + X_22469006_22469011_+ 1 1 1 0 CG14619 FBtr0339506 22468183 22470146 X + 22468981 22469026 3'utr CG14619 FlyBase G63532.1 AAATATCTCCATAGCTAAGGGAAAAAGCTTTTTAGCAACTAAAATA 23 22469012 0.654873826 4 23 125 1 1.397940009 0 0.086956522 0.16 23 0 0 25 X:22468981-22469026 6 CG14619 FBtr0339506 22468183 22470146 AGCTTT 6mer2-7 dme-miR-79-3p X + 22468991 22469035 3'utr CG14619 FlyBase G47890.1 ATAGCTAAGGGAAAAAGCTTTTTAGCAACTAAAATAAAAAGTAAT 21 22469012 0.841619804 3 21 104 1 1.447158031 0.035714286 0.238095238 0.428571429 21 0 0 28 X:22468991-22469035 6 21.5 5898 FBgn0031187 1740.476667 50.81666667 78.19 0.012352938 0.423089538 0.274971224 -6 -6 -6 0.01 dme-miR-932-5p 6mer2-7 GAATTG X 22469100 22469105 + X_22469100_22469105_+ 0.993020395 1 0.996510197 0.004935322 CG14619 FBtr0339506 22468183 22470146 X + 22469088 22469137 3'utr CG14619 FlyBase G63533.1 AAGCTGAAATCTGAATTGTGAAAACGTACTTATGATAATTGCTAGTAGTA 10 22469103 0.721658443 4 9 64 1 1.113943352 0.230769231 0.3 0.461538462 10 0 0 13 X:22469088-22469137 6 CG14619 FBtr0339506 22468183 22470146 GAATTG 6mer2-7 dme-miR-932-5p X + 22469074 22469149 3'utr CG14619 FlyBase G47891.1 GGGGCCGCGAAGTGAAGCTGAAATCTGAATTGTGAAAACGTACTTATGATAATTGCTAGTAGTACAATTTAAAAAA 9 22469103 0.977015606 4 9 56 1 1.146128036 0.214285714 0.555555556 0.714285714 9 0 0 14 X:22469074-22469149 6 6.5 5899 FBgn0031187 1740.476667 50.81666667 78.19 0.003734609 0.12791079 0.083130835 -3 -3 -3 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC X 22469378 22469383 + X_22469378_22469383_+ 1 1 1 0 CG14619 FBtr0339506 22468183 22470146 X + 22469365 22469404 3'utr CG14619 FlyBase G63534.1 AAAGCTACCAAAACTAGTCTCAAAGAAGAAAGGTTTACAT 6 22469384 0.933177455 2 6 24 1 0.903089987 0.5 0.333333333 0.5 6 0 0 8 X:22469365-22469404 6 CG14619 FBtr0339506 22468183 22470146 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" X + 22469365 22469399 3'utr CG14619 FlyBase G47892.1 AAAGCTACCAAAACTAGTCTCAAAGAAGAAAGGTT 6 22469384 0.907863915 2 6 20 1 1 0.6 0.5 0.7 6 0 0 10 X:22469365-22469399 6 6 5900 FBgn0031187 1740.476667 50.81666667 78.19 0.003447331 0.118071499 0.076736156 -6 -6 -6 0.01 dme-miR-980-5p 7mer-A1 AAAAACA X 22474911 22474917 - X_22474911_22474917_- 0.782911824 0.782911824 0.782911824 0 CG12576 FBtr0077366|FBtr0346429|FBtr0077365|FBtr0335046 22474849|22474849|22474849|22474849 22475730|22475730|22475730|22475730 X - 22474904 22474996 3'utr CG12576 FlyBase G69567.1 TTGTATTCTTATTATTATTTGCGCTTAAAATACATAAGTTATCATTTAAATTGCGAAACAAAACGAAATGTGATTTTGTAAAAACAAAAACTG 95 22474922 0.894943606 13 92 605 0.991869919 2.086359831 0.18699187 0.252631579 0.422764228 95 1 0 122 X:22474904-22474996 7 CG12576 FBtr0335046|FBtr0077365|FBtr0346429|FBtr0077366 22474849|22474849|22474849|22474849 22475730|22475730|22475730|22475730 AAAAACA 7mer-A1 dme-miR-980-5p X - 22474903 22474992 3'utr CG12576 FlyBase G52319.1 ATTCTTATTATTATTTGCGCTTAAAATACATAAGTTATCATTTAAATTGCGAAACAAAACGAAATGTGATTTTGTAAAAACAAAAACTGA 62 22474922 0.964621739 7 60 382 0.989583333 1.977723605 0.15625 0.387096774 0.604166667 62 1 0 95 X:22474903-22474992 7 32.5 5901 FBgn0031190 668.0366667 33.82666667 51.78333333 0.048650024 0.960780449 0.627615063 5 5 5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 22475270 22475275 - X_22475270_22475275_- 0.620414417 0.754305856 0.687360137 0.094675588 CG12576 FBtr0077366|FBtr0077366|FBtr0077366|FBtr0346429|FBtr0346429|FBtr0346429|FBtr0077365|FBtr0077365|FBtr0077365|FBtr0335046|FBtr0335046|FBtr0335046 22474849|22474849|22474849|22474849|22474849|22474849|22474849|22474849|22474849|22474849|22474849|22474849 22475730|22475730|22475730|22475730|22475730|22475730|22475730|22475730|22475730|22475730|22475730|22475730 X - 22475246 22475294 3'utr CG12576 FlyBase G69570.1 ATGGTTTATTTTGATGTCGCTGTGAGTGAGGGCGTTAGCTACTTAATCT 7 22475268 0.989153587 4 6 63 0.888888889 0.903089987 0.111111111 0.142857143 0.333333333 7 1 0 8 X:22475246-22475294 6 CG12576 FBtr0335046|FBtr0335046|FBtr0335046|FBtr0077365|FBtr0077365|FBtr0077365|FBtr0346429|FBtr0346429|FBtr0346429|FBtr0077366|FBtr0077366|FBtr0077366 22474849|22474849|22474849|22474849|22474849|22474849|22474849|22474849|22474849|22474849|22474849|22474849 22475730|22475730|22475730|22475730|22475730|22475730|22475730|22475730|22475730|22475730|22475730|22475730 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X - 22475253 22475284 3'utr CG12576 FlyBase G52321.1 TTGATGTCGCTGTGAGTGAGGGCGTTAGCTAC 9 22475269 0.798154435 4 9 51 1 1.113943352 0.461538462 0.222222222 0.461538462 9 0 0 13 X:22475253-22475284 6 8 5902 FBgn0031190 668.0366667 33.82666667 51.78333333 0.011975391 0.236499803 0.154489862 -7 -6 -6.5 0.01 dme-miR-1012-3p 6mer2-7 TGACTA X 22475423 22475428 - X_22475423_22475428_- 1 1 1 0 CG12576 FBtr0077366|FBtr0346429|FBtr0077365|FBtr0335046 22474849|22474849|22474849|22474849 22475730|22475730|22475730|22475730 X - 22475378 22475445 3'utr CG12576 FlyBase G69571.1 ATTTAACCCTATGGTTATGACTATTTTACTTTATGACTTTAGTTTGTATTTGTCCTGTGTGTTTATCT 20 22475421 0.683394929 13 18 244 0.92 1.06069784 0.12 0.25 0.4 20 1 1 23 X:22475378-22475445 6 CG12576 FBtr0335046|FBtr0077365|FBtr0346429|FBtr0077366 22474849|22474849|22474849|22474849 22475730|22475730|22475730|22475730 TGACTA 6mer2-7 dme-miR-1012-3p X - 22475368 22475442 3'utr CG12576 FlyBase G52322.1 TAACCCTATGGTTATGACTATTTTACTTTATGACTTTAGTTTGTATTTGTCCTGTGTGTTTATCTACTGACCGCA 9 22475407 0.996270749 6 7 107 0.857142857 1.079181246 0.214285714 0.444444444 0.642857143 9 2 0 12 X:22475368-22475442 6 7.5 5903 FBgn0031190 668.0366667 33.82666667 51.78333333 0.011226929 0.221718565 0.144834245 -7 -21 -14 0.01 dme-miR-190-5p 6mer3-8 ACATAT X 22475665 22475670 - X_22475665_22475670_- 0.537045186 1 0.768522593 0.327358478 CG12576 FBtr0077366|FBtr0346429|FBtr0077365|FBtr0335046 22474849|22474849|22474849|22474849 22475730|22475730|22475730|22475730 X - 22475639 22475816 stop_codon CG12576 FlyBase G69574.1 ATCGTGACCAGCAGCGCATTGTCACCGCCCTGGATTCGTCGGACGAGAGCGATTTTGAGATACTCGAATCGGATGACTTTAAGTAAAGATTGGATCAATCGGCGATCGGACCGATTTGTCGTATTATAAAGCTATTGTCTTAACATACATATGCATACACAAATAGAACTCAAAAAAT 27 22475682 0.978821187 15 25 155 0.96969697 1.505149978 0.090909091 0.148148148 0.303030303 27 1 0 32 X:22475639-22475816 6 CG12576 FBtr0335046|FBtr0077365|FBtr0346429|FBtr0077366 22474849|22474849|22474849|22474849 22475730|22475730|22475730|22475730 ACATAT 6mer3-8 dme-miR-190-5p X - 22475574 22475693 3'utr CG12576 FlyBase G52323.1 TTATAAAGCTATTGTCTTAACATACATATGCATACACAAATAGAACTCAAAAAATCGACAGACAAACAGACGGCGCCAACGATTGGAGTGGTTCCAATTTCCCTGGTGGAGATCAGTTAT 18 22475682 0.971139248 10 18 98 1 1.414973348 0.192307692 0.333333333 0.538461538 18 0 0 26 X:22475574-22475693 6 6 5904 FBgn0031190 668.0366667 33.82666667 51.78333333 0.008981543 0.177374852 0.115867396 12 12 12 0.01 dme-miR-283-5p 6mer3-8 TGATAT X 2252572 2252577 - X_2252572_2252577_- 1 0.999978161 0.99998908 1.54E-05 CG3091 FBtr0342767|FBtr0070416 2252330|2252330 2252595|2252595 X - 2252458 2252599 stop_codon CG3091 FlyBase G64359.1 CTGATATCCTGATCATCGAACGTGATATAAACATAAATGTGATCAAGCATCGCGTCTTGCCAAGCGAAGATATCGATTAGTTGGGAAAGTCCCAGAAACACTTACAGGTTCTAGAGCTCAGTGAAGCTGGCCCTCCATTAAG 155 2252572 0.805095617 21 142 867 0.898395722 1.62324929 0.417112299 0.15483871 0.299465241 155 16 3 168 X:2252458-2252599 6 CG3091 FBtr0342767|FBtr0070416 2252330|2252330 2252595|2252595 TGATAT 6mer3-8 dme-miR-283-5p X - 2252454 2252598 stop_codon CG3091 FlyBase G48507.1 TGATATCCTGATCATCGAACGTGATATAAACATAAATGTGATCAAGCATCGCGTCTTGCCAAGCGAAGATATCGATTAGTTGGGAAAGTCCCAGAAACACTTACAGGTTCTAGAGCTCAGTGAAGCTGGCCCTCCATTAAGAATT 108 2252572 0.793880636 18 92 597 0.853333333 1.329058719 0.44 0.314814815 0.506666667 108 17 5 128 X:2252454-2252598 6 85 5905 FBgn0029608 227.6666667 23.33 35.96333333 0.373352855 3.643377625 2.363518398 -5 -5 -5 0.01 dme-miR-33-5p 6mer3-8 CAATGC X 22533562 22533567 + X_22533562_22533567_+ 1 1 1 0 S6kII FBtr0333715|FBtr0077360 22533438|22533438 22536371|22534093 X + 22533558 22533592 5'utr S6kII FlyBase G63594.1 AGGACAATGCGCAGAAGCTTGGTTCACATCCACAA 7 22533580 0.862842458 3 7 28 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 X:22533558-22533592 6 S6kII FBtr0077360|FBtr0333715 22533438|22533438 22534093|22536371 CAATGC 6mer3-8 dme-miR-33-5p X + 22533558 22533588 5'utr S6kII FlyBase G47930.1 AGGACAATGCGCAGAAGCTTGGTTCACATCC 6 22533578 0.969064551 4 4 15 0.571428571 0.602059991 0 0.166666667 0.285714286 6 3 0 4 X:22533558-22533588 6 5 5906 FBgn0262866 149.7166667 4.3 6.58 0.033396415 1.162790698 0.759878419 -18 -16 -17 0.01 dme-miR-277-3p 6mer3-8 TGCATT X 22536228 22536233 - X_22536228_22536233_- 1 1 1 0 CG17598 FBtr0333716 22534829 22536860 X - 22536214 22536262 3'utr CG17598 FlyBase G69583.1 CGTTCTATTCTGTAGAAGCGAAATTTCAGTGCATTATATTATATTTTAA 50 22536239 0.851175406 5 49 456 0.980769231 1.707570176 0.230769231 0.04 0.076923077 50 1 0 51 X:22536214-22536262 6 CG17598 FBtr0333716 22534829 22536860 TGCATT 6mer3-8 dme-miR-277-3p X - 22536211 22536267 3'utr CG17598 FlyBase G52329.1 GTTAACGTTCTATTCTGTAGAAGCGAAATTTCAGTGCATTATATTATATTTTAAAAT 35 22536239 0.797276473 9 35 288 1 1.72427587 0.320754717 0.342857143 0.566037736 35 0 0 53 X:22536211-22536267 6 41.5 5907 FBgn0031194 238.9466667 10.09 15.33666667 0.173678924 4.112983152 2.705933493 6 6 6 0.01 dme-miR-318-3p 6mer3-8 CCCAGT X 22541844 22541849 + X_22541844_22541849_+ 1 1 1 0 CG17600 FBtr0077358|FBtr0333714|FBtr0333713|FBtr0077359 22541817|22541817|22541817|22541817 22542024|22542024|22542024|22542024 X + 22541828 22541872 3'utr CG17600 FlyBase G63599.1 CATCCGCTCTCTAGTTCCCAGTTTCCCAGACTTTTGTATATATTT 13 22541861 0.943304535 4 13 114 1 1.176091259 0.266666667 0.153846154 0.266666667 13 0 0 15 X:22541828-22541872 6 CG17600 FBtr0077359|FBtr0333713|FBtr0333714|FBtr0077358 22541817|22541817|22541817|22541817 22542024|22542024|22542024|22542024 CCCAGT 6mer3-8 dme-miR-318-3p X + 22541826 22541866 3'utr CG17600 FlyBase G47934.1 AGCATCCGCTCTCTAGTTCCCAGTTTCCCAGACTTTTGTAT 11 22541861 0.982748243 3 11 86 1 1.176091259 0.133333333 0.272727273 0.466666667 11 0 0 15 X:22541826-22541866 6 12 5908 FBgn0031195 50 6.1 9.253333333 0.24 1.967213115 1.296829971 -17 -17 -17 0.01 dme-miR-79-3p 7mer-m8 TAGCTTT X 2264605 2264611 + X_2264605_2264611_+ 0.620204031 0.620195666 0.620199848 5.87E-06 CG3071 FBtr0070398 2264570 2264825 X + 2264585 2264645 3'utr CG3071 FlyBase G58340.1 AGAACAACGATATAGCCACATAGCTTTGATATTAAGTATATAAGTAGTAGTAGTTTAAGTA 12 2264597 0.880785553 5 10 93 0.8 0.602059991 0 0.25 0.4 12 1 2 12 X:2264585-2264645 7 CG3071 FBtr0070398 2264570 2264825 TAGCTTT 7mer-m8 dme-miR-79-3p X + 2264579 2264621 3'utr CG3071 FlyBase G44124.1 CGACGTAGAACAACGATATAGCCACATAGCTTTGATATTAAGT 6 2264609 0.971427869 3 6 35 1 0.954242509 0 0.5 0.666666667 6 0 0 9 X:2264579-2264621 7 7 5909 FBgn0023527 429.3266667 27.48 42.32666667 0.016304601 0.254730713 0.165380375 8 -4 2 0.01 dme-miR-34-5p 7mer-m8 CACTGCC X 2265654 2265660 - X_2265654_2265660_- 0.708953382 0.708953382 0.708953382 0 CG2924 FBtr0345315|FBtr0346648|FBtr0070412|FBtr0300793 2264989|2264655|2264989|2264989 2265784|2265784|2265784|2265784 X - 2265639 2265711 3'utr CG2924 FlyBase G64367.1 CACACCGCCAAAATTAGCCTGTCCACATCCGCCAAGCACACATCCCGCACTCACTGCCGGCTTGATCTGATAT 13 2265661 0.945534193 3 13 55 1 1.146128036 0 0.076923077 0.142857143 13 0 0 14 X:2265639-2265711 7 CG2924 FBtr0070412|FBtr0300793|FBtr0345315|FBtr0346648 2264989|2264989|2264989|2264655 2265784|2265784|2265784|2265784 CACTGCC 7mer-m8 dme-miR-34-5p X - 2265642 2265674 3'utr CG2924 FlyBase G48513.1 ACACATCCCGCACTCACTGCCGGCTTGATCTGA 6 2265661 0.851107621 2 5 28 0.666666667 0.77815125 0 0.333333333 0.555555556 6 3 0 6 X:2265642-2265674 7 7 5910 FBgn0023528 1233.12 56.31666667 86.87 0.005676658 0.124297129 0.080580177 1 1 1 0.01 dme-bantam-3p 6mer3-8 TGATCT X 2271138 2271143 - X_2271138_2271143_- 1 1 1 0 CG2918 FBtr0300792 2271006 2271490 X - 2271120 2271236 3'utr CG2918 FlyBase G64374.1 ATTTTCCATTTCCATACCATTCCGCATAGGAAATACAAGACTTGAAGAAGTACTCACACGGTCCCCTCTATATGTATATCCACTATATCTTATTGATCTATTGTAGCGAAAGTAGCG 60 2271143 0.877547231 14 54 437 0.916666667 1.51851394 0.069444444 0.116666667 0.263888889 60 5 1 66 X:2271120-2271236 6 CG2918 FBtr0300792 2271006 2271490 TGATCT 6mer3-8 dme-bantam-3p X - 2271081 2271165 3'utr CG2918 FlyBase G48517.1 ATGTATATCCACTATATCTTATTGATCTATTGTAGCGAAAGTAGCGAAACGAATTGGGCGGGATGAGTTAATTGCCGAGATAAGA 29 2271143 0.992766432 6 24 271 0.871794872 0.832508913 0.025641026 0.24137931 0.435897436 29 1 4 34 X:2271081-2271165 6 26.5 5911 FBgn0023529 3854.556667 145.7 223.8466667 0.00687498 0.181880577 0.118384609 0 0 0 0.01 dme-miR-14-3p 6mer3-8 AAGACT X 2271195 2271200 - X_2271195_2271200_- 1 1 1 0 CG2918 FBtr0300792 2271006 2271490 X - 2271120 2271236 3'utr CG2918 FlyBase G64374.1 ATTTTCCATTTCCATACCATTCCGCATAGGAAATACAAGACTTGAAGAAGTACTCACACGGTCCCCTCTATATGTATATCCACTATATCTTATTGATCTATTGTAGCGAAAGTAGCG 60 2271203 0.877547231 14 54 437 0.916666667 1.51851394 0.069444444 0.116666667 0.263888889 60 5 1 66 X:2271120-2271236 6 CG2918 FBtr0300792 2271006 2271490 AAGACT 6mer3-8 dme-miR-14-3p X - 2271188 2271236 3'utr CG2918 FlyBase G48518.1 ATTTTCCATTTCCATACCATTCCGCATAGGAAATACAAGACTTGAAGAA 15 2271203 0.949128135 4 12 55 0.826086957 1.278753601 0.043478261 0.466666667 0.652173913 15 4 0 19 X:2271188-2271236 6 17.5 5912 FBgn0023529 3854.556667 145.7 223.8466667 0.004540081 0.120109815 0.078178515 3 3 3 0.01 dme-miR-968-5p 6mer2-7 CTACTT X 2271306 2271311 - X_2271306_2271311_- 0.999999983 0.999999982 0.999999982 0 CG2918 FBtr0300792|FBtr0070411 2271006|2271283 2271490|2271490 X - 2271307 2271388 3'utr CG2918 FlyBase G64375.1 AAAGACGGCAAATGGTCGCGAAACGGGGCGTCTTTATTTCTATGATTTTTTTTAGCTAAAGTCGGGGTTAAATTATGCTACT 20 2271321 0.994913067 7 18 158 0.931034483 1.130333768 0.137931034 0.35 0.551724138 20 1 1 27 X:2271307-2271388 4 CG2918 FBtr0300792|FBtr0070411 2271006|2271283 2271490|2271490 CTACTT 6mer2-7 dme-miR-968-5p X - 2271293 2271352 3'utr CG2918 FlyBase G48519.1 TTTCTATGATTTTTTTTAGCTAAAGTCGGGGTTAAATTATGCTACTTCTAATCGAAAACA 15 2271321 0.986444361 7 15 127 1 1.301029996 0.25 0.266666667 0.45 15 0 0 20 X:2271293-2271352 6 1.5 5913 FBgn0023529 3854.556667 145.7 223.8466667 0.00038915 0.010295127 0.006701016 10 10 10 0.01 dme-miR-190-5p 6mer3-8 ACATAT X 2279564 2279569 - X_2279564_2279569_- 1 1 1 0 CG2865 FBtr0332962 2278029 2281577 X - 2279520 2279587 3'utr CG2865 FlyBase G64390.1 ATTATAGTTTATATTCCTACATATGCAGACTACATGGATGAACCAATATACCAATATACATTATACAT 34 2279564 0.863360146 6 32 227 0.945945946 1.544068044 0.027027027 0.088235294 0.162162162 34 2 0 35 X:2279520-2279587 6 CG2865 FBtr0332962 2278029 2281577 ACATAT 6mer3-8 dme-miR-190-5p X - 2279542 2279582 3'utr CG2865 FlyBase G48529.1 AGTTTATATTCCTACATATGCAGACTACATGGATGAACCAA 14 2279564 0.676101321 5 12 64 0.875 0.84509804 0.083333333 0.428571429 0.666666667 14 1 2 21 X:2279542-2279582 6 20.5 5914 FBgn0023526 330.04 10.34 15.85333333 0.062113683 1.982591876 1.293103448 -5 -5 -5 0.01 dme-miR-1008-3p 7mer-A1 GCTGTGA X 2280400 2280406 - X_2280400_2280406_- 0.823187973 0.823188418 0.823188196 2.83E-07 CG2865 FBtr0332962 2278029 2281577 X - 2280371 2280432 3'utr CG2865 FlyBase G64396.2 AAATTTTTTCTTCGAAAAAAATTACGGCTGTGATAGAATTTTAAGTTTTTGGCTAAACAAAA 196 2280410 0.776511659 16 157 1700 0.814814815 1.291270158 0.268518519 0.102040816 0.185185185 196 32 8 176 X:2280371-2280432 7 CG2865 FBtr0332962 2278029 2281577 GCTGTGA 7mer-A1 dme-miR-1008-3p X - 2280364 2280429 3'utr CG2865 FlyBase G48532.1 TTTTTTCTTCGAAAAAAATTACGGCTGTGATAGAATTTTAAGTTTTTGGCTAAACAAAAAAAGAAG 158 2280411 0.989003778 15 135 1352 0.882629108 1.672097858 0.248826291 0.259493671 0.450704225 158 22 3 188 X:2280364-2280429 7 173.5 5915 FBgn0023526 330.04 10.34 15.85333333 0.525693855 16.7794971 10.94407065 4 5 4.5 0.01 dme-miR-33-5p 8mer-A1 CAATGCAA X 2280802 2280809 - X_2280802_2280809_- 0.634552243 0.634552243 0.634552243 0 CG2865 FBtr0332962 2278029 2281577 X - 2280789 2280827 3'utr CG2865 FlyBase G64400.1 AAACAAAAAAAAAACAAACAATGCAAGGTTTCATTTATT 50 2280806 0.922489444 3 49 172 1 1.785329835 0 0.1 0.262295082 50 0 0 61 X:2280789-2280827 8 CG2865 FBtr0332962 2278029 2281577 CAATGCAA 8mer-A1 dme-miR-33-5p X - 2280790 2280826 3'utr CG2865 FlyBase G48534.1 AACAAAAAAAAAACAAACAATGCAAGGTTTCATTTAT 30 2280806 0.915976108 2 29 98 0.976744186 1.62324929 0 0.333333333 0.534883721 30 1 0 42 X:2280790-2280826 8 39.5 5916 FBgn0023526 330.04 10.34 15.85333333 0.119682463 3.820116054 2.491589571 -3 -3 -3 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA X 2280908 2280914 - X_2280908_2280914_- 0.823349562 0.823349562 0.823349562 0 CG2865 FBtr0332962 2278029 2281577 X - 2280899 2280932 3'utr CG2865 FlyBase G64401.1 AAAACCTCCGAAGTTCTCCTAGTCATACAAAAAA 7 2280916 0.624495836 4 7 38 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 X:2280899-2280932 7 CG2865 FBtr0332962 2278029 2281577 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X - 2280902 2280929 3'utr CG2865 FlyBase G48535.1 ACCTCCGAAGTTCTCCTAGTCATACAAA 5 2280907 0.92735952 2 5 27 1 0.903089987 0.25 0.4 0.625 5 0 0 8 X:2280902-2280929 7 6 5917 FBgn0023526 330.04 10.34 15.85333333 0.018179615 0.580270793 0.378469302 2 -7 -2.5 0.01 dme-miR-305-5p 7mer-A1 GTACAAA X 2281375 2281381 - X_2281375_2281381_- 0.782911824 0.782911824 0.782911824 0 CG2865 FBtr0332962 2278029 2281577 X - 2281340 2281456 3'utr CG2865 FlyBase G64402.1 ATTATTATATAGGAAGGAGCAGGAAGATGATCGGGCGGATTGGCCAGTATTACTCATTAATGGCAGTCGCGATTTGTACAAACAAAAATACACAAAAAATTAGTTGTAGGCAATTGA 92 2281383 0.968749913 18 86 476 0.940594059 1.375663614 0.188118812 0.086956522 0.168316832 92 3 3 95 X:2281340-2281456 7 CG2865 FBtr0332962 2278029 2281577 GTACAAA 7mer-A1 dme-miR-305-5p X - 2281346 2281499 3'utr CG2865 FlyBase G48537.1 AAGCGAACATTTAGGCTATGACCCATATGCTAATCTCTAAGCTATTATTATATAGGAAGGAGCAGGAAGATGATCGGGCGGATTGGCCAGTATTACTCATTAATGGCAGTCGCGATTTGTACAAACAAAAATACACAAAAAATTAGTTGTAGGC 70 2281383 0.957083362 14 68 329 0.98245614 1.748188027 0.228070175 0.428571429 0.649122807 70 1 1 112 X:2281346-2281499 7 51 5918 FBgn0023526 330.04 10.34 15.85333333 0.154526724 4.932301741 3.216989066 2 2 2 0.01 dme-miR-277-3p 6mer2-7 GCATTT X 22826469 22826474 - X_22826469_22826474_- 1 1 1 0 fog FBtr0333180|FBtr0100538|FBtr0333179|FBtr0077342|FBtr0333182|FBtr0333181 22826160|22826160|22826160|22826160|22824315|22826160 22827046|22827046|22827046|22827046|22827046|22827046 X - 22826458 22826505 3'utr fog FlyBase G69600.2 AACTCATATATTCATTGTGCGTACAGTCTGAGCATTTGTTGTATATAC 31 22826485 0.75052404 9 25 213 0.897435897 1.544068044 0.179487179 0.258064516 0.41025641 31 4 0 35 X:22826458-22826505 6 fog FBtr0333182|FBtr0333181|FBtr0333179|FBtr0077342|FBtr0333180|FBtr0100538 22824315|22826160|22826160|22826160|22826160|22826160 22827046|22827046|22827046|22827046|22827046|22827046 GCATTT 6mer2-7 dme-miR-277-3p X - 22826449 22826525 3'utr fog FlyBase G52343.1 ACTACTATTATTACCATTGTAACTCATATATTCATTGTGCGTACAGTCTGAGCATTTGTTGTATATACATTAGTGAA 21 22826485 0.776502947 11 20 164 0.962962963 1.414973348 0.185185185 0.238095238 0.407407407 21 1 0 26 X:22826449-22826525 6 21 5919 FBgn0000719 1767.816667 49.34333333 75.43666667 0.01187906 0.425589408 0.278379214 11 11 11 0.01 dme-miR-308-3p 7mer-m1 TGTGATT X 22826605 22826611 - X_22826605_22826611_- 0.52122275 0.521222983 0.521222866 2.12E-07 fog FBtr0333180|FBtr0100538|FBtr0333179|FBtr0077342|FBtr0333182|FBtr0333181 22826160|22826160|22826160|22826160|22824315|22826160 22827046|22827046|22827046|22827046|22827046|22827046 X - 22826565 22826674 3'utr fog FlyBase G69601.2 ACATTACAATAGTTTTATATGTGAGCGCTGCTGTCGCTGTTGCGAGCCTTAGCAATATTTCATTGTGATTACTTAGGCATATGAATTGATCGTTAGACTTAGGAAATCTT 402 22826612 0.878730335 28 349 4105 0.877083333 1.177124064 0.0625 0.167082294 0.304166667 401 32 27 421 X:22826565-22826674 7 fog FBtr0333182|FBtr0333181|FBtr0333179|FBtr0077342|FBtr0333180|FBtr0100538 22824315|22826160|22826160|22826160|22826160|22826160 22827046|22827046|22827046|22827046|22827046|22827046 TGTGATT 7mer-m1 dme-miR-308-3p X - 22826530 22826671 3'utr fog FlyBase G52344.1 TTACAATAGTTTTATATGTGAGCGCTGCTGTCGCTGTTGCGAGCCTTAGCAATATTTCATTGTGATTACTTAGGCATATGAATTGATCGTTAGACTTAGGAAATCTTATTTGTATATCCAGAATCTTTTGATGTATCTTTTT 235 22826612 0.744487624 30 212 2291 0.904494382 1.604765885 0.084269663 0.395744681 0.601123596 235 27 7 322 X:22826530-22826671 7 253 5920 FBgn0000719 1767.816667 49.34333333 75.43666667 0.143114388 5.127339053 3.353806725 1 1 1 0.01 dme-bantam-3p 6mer3-8 TGATCT X 23012315 23012320 - X_23012315_23012320_- 1 0.999999988 0.999999994 0 Rab21 FBtr0299903|FBtr0336924|FBtr0111134 23012138|23012138|23012138 23012376|23012376|23012376 X - 23012278 23012342 3'utr Rab21 FlyBase G69624.1 ATAGTAGACCTTTAACCGATGTTGATCTTGTGTATATATTATACATAGATAGATATAAATATAAA 46 23012321 0.740078796 8 46 436 1 1.763427994 0.034482759 0.239130435 0.396551724 46 0 0 58 X:23012278-23012342 6 Rab21 FBtr0111134|FBtr0336924|FBtr0299903 23012138|23012138|23012138 23012376|23012376|23012376 TGATCT 6mer3-8 dme-bantam-3p X - 23012292 23012416 stop_codon Rab21 FlyBase G52364.1 CGGAGATCCTGCGGGCCAGCGGTCCTGTTGCGGCATTTAGCCGTTCCCATTGTGATAGTAATCATAACTATAAAATAGTAGACCTTTAACCGATGTTGATCTTGTGTATATATTATACATAGATA 94 23012321 0.977557566 19 89 737 0.961538462 1.397940009 0.084615385 0.319148936 0.507692308 94 1 4 125 X:23012292-23012416 6 37.5 5921 FBgn0039966 49 5.726666667 8.77 0.765306122 6.548311991 4.275940707 1 1 1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 23012360 23012366 - X_23012360_23012366_- 0.801970437 0.801970437 0.801970437 0 Rab21 FBtr0299903|FBtr0299903|FBtr0299903|FBtr0336924|FBtr0336924|FBtr0336924|FBtr0111134|FBtr0111134|FBtr0111134 23012138|23012138|23012138|23012138|23012138|23012138|23012138|23012138|23012138 23012376|23012376|23012376|23012376|23012376|23012376|23012376|23012376|23012376 X - 23012343 23012415 stop_codon Rab21 FlyBase G69625.1 GGAGATCCTGCGGGCCAGCGGTCCTGTTGCGGCATTTAGCCGTTCCCATTGTGATAGTAATCATAACTATAAA 97 23012367 0.740996206 12 90 684 0.919354839 1.278753601 0.088709677 0.237113402 0.403225806 97 5 5 114 X:23012343-23012415 7 Rab21 FBtr0111134|FBtr0111134|FBtr0111134|FBtr0336924|FBtr0336924|FBtr0336924|FBtr0299903|FBtr0299903|FBtr0299903 23012138|23012138|23012138|23012138|23012138|23012138|23012138|23012138|23012138 23012376|23012376|23012376|23012376|23012376|23012376|23012376|23012376|23012376 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 23012292 23012416 stop_codon Rab21 FlyBase G52364.1 CGGAGATCCTGCGGGCCAGCGGTCCTGTTGCGGCATTTAGCCGTTCCCATTGTGATAGTAATCATAACTATAAAATAGTAGACCTTTAACCGATGTTGATCTTGTGTATATATTATACATAGATA 94 23012367 0.977557566 19 89 737 0.961538462 1.397940009 0.084615385 0.319148936 0.507692308 94 1 4 125 X:23012292-23012416 7 69 5922 FBgn0039966 49 5.726666667 8.77 1.408163265 12.04889406 7.867730901 1 1 1 0.01 dme-bantam-3p 8mer-A1 TGATCTCA X 23080962 23080969 - X_23080962_23080969_- 0.631136385 0.631136385 0.631136385 0 CG17163 FBtr0113727|FBtr0309316 23080869|23080757 23081631|23081631 X - 23080920 23081098 3'utr CG17163 FlyBase G69629.1 CTTATATATTTACAAATGTACTTATATATCTTTAAGATAAATAGTGTACACGCCTAGATACACTCCAATTAATTAACTTTGGGTATCGTTCTACGAATTTTGCATACTGGATGTGTATTAAGGTGTATTTGATCTCATTCAATGATATTATTTGTGATGTAACAACTTCAAGGTAATTT 191 23080970 0.991529555 25 180 1950 0.941176471 1.84094208 0.113122172 0.109947644 0.230769231 191 11 2 208 X:23080920-23081098 8 CG17163 FBtr0309316|FBtr0113727 23080757|23080869 23081631|23081631 TGATCTCA 8mer-A1 dme-bantam-3p X - 23080899 23080998 3'utr CG17163 FlyBase G52367.1 TGCATACTGGATGTGTATTAAGGTGTATTTGATCTCATTCAATGATATTATTTGTGATGTAACAACTTCAAGGTAATTTCAATTATTCCCCTAAATGAAA 103 23080970 0.992618809 18 100 1158 0.979452055 2.155336037 0.123287671 0.359223301 0.547945205 103 3 0 143 X:23080899-23080998 8 100.5 5923 FBgn0039942 110.9 8.843333333 13.50666667 0.906221821 11.36449303 7.44076999 1 1 1 0.01 dme-miR-190-5p 6mer3-8 ACATAT X 23085819 23085824 - X_23085819_23085824_- 1 1 1 0 CG17159 FBtr0113717|FBtr0302542 23085729|23084958 23089410|23089410 X - 23085803 23085911 3'utr CG17159 FlyBase G69632.1 AATATATATTTAGCTACTATATAAGCTATAACCATACATATATGTATGTATATTGATATATTTGAATGAACATGTCCTAGTTATAGAACATATATGATTGTTGTTGTCT 9 23085834 0.986591996 7 8 73 1 0.954242509 0.111111111 0 0 9 0 0 9 X:23085803-23085911 6 CG17159 FBtr0302542|FBtr0113717 23084958|23085729 23089410|23089410 ACATAT 6mer3-8 dme-miR-190-5p X - 23085783 23085846 3'utr CG17159 FlyBase G52370.1 ATGAACATGTCCTAGTTATAGAACATATATGATTGTTGTTGTCTCCATTAACATATGAAATGTA 7 23085819 0.980880346 5 7 58 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 X:23085783-23085846 6 4 5924 FBgn0039945 285.31 7.496666667 11.39666667 0.014019838 0.533570476 0.350979819 10 -5 2.5 0.01 dme-miR-184-5p 6mer3-8 TGATAA X 23086253 23086258 - X_23086253_23086258_- 1 1 1 0 CG17159 FBtr0113717|FBtr0302542 23085729|23084958 23089410|23089410 X - 23086218 23086272 3'utr CG17159 FlyBase G69633.1 AGGGAAGCTAACAATGATAATCTGGAAATTATGCTTACAAACAACACTCCTATAC 7 23086244 0.969436802 4 6 36 0.857142857 0.77815125 0.285714286 0 0 7 1 0 6 X:23086218-23086272 6 CG17159 FBtr0302542|FBtr0113717 23084958|23085729 23089410|23089410 TGATAA 6mer3-8 dme-miR-184-5p X - 23086230 23086269 3'utr CG17159 FlyBase G52371.1 GAAGCTAACAATGATAATCTGGAAATTATGCTTACAAACA 6 23086258 0.949579637 3 6 26 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 X:23086230-23086269 6 4 5925 FBgn0039945 285.31 7.496666667 11.39666667 0.014019838 0.533570476 0.350979819 -14 0 -7 0.01 dme-bantam-3p 6mer3-8 TGATCT X 23086405 23086410 - X_23086405_23086410_- 1 1 1 0 CG17159 FBtr0113717|FBtr0302542 23085729|23084958 23089410|23089410 X - 23086309 23086454 3'utr CG17159 FlyBase G69634.1 ACTTTTCATAGCATTTGGTAGTTGTTAATAGAAATGACATTTGTTGATCTTAACTATACCTGTTACTCTTAGATTAAAAGGTTATACCAAAATCGTTGGAACTATGTATTAGTCAAAAGAAAACGTTGTCGAATAGTAAAGTAAAA 29 23086412 0.991444339 15 26 274 0.911764706 1.491361694 0.205882353 0.172413793 0.294117647 29 3 0 31 X:23086309-23086454 6 CG17159 FBtr0302542|FBtr0113717 23084958|23085729 23089410|23089410 TGATCT 6mer3-8 dme-bantam-3p X - 23086380 23086452 3'utr CG17159 FlyBase G52373.1 TTTTCATAGCATTTGGTAGTTGTTAATAGAAATGACATTTGTTGATCTTAACTATACCTGTTACTCTTAGATT 15 23086410 0.739126445 8 14 149 0.935483871 1.462397998 0.258064516 0.666666667 0.838709677 15 2 0 29 X:23086380-23086452 6 16.5 5926 FBgn0039945 285.31 7.496666667 11.39666667 0.057831832 2.200978213 1.447791752 2 0 1 0.01 dme-miR-999-3p 6mer3-8 AGTTAA X 23086748 23086753 - X_23086748_23086753_- 1 1 1 0 CG17159 FBtr0113717|FBtr0302542 23085729|23084958 23089410|23089410 X - 23086721 23086759 3'utr CG17159 FlyBase G69637.1 ATTATGAGTTAAGAACATTCCATTCGTTTGCTTTAAGAG 18 23086742 0.887232943 2 18 166 1 1.342422681 0.272727273 0.166666667 0.318181818 18 0 0 22 X:23086721-23086759 6 CG17159 FBtr0302542|FBtr0113717 23084958|23085729 23089410|23089410 AGTTAA 6mer3-8 dme-miR-999-3p X - 23086720 23086754 3'utr CG17159 FlyBase G52374.1 GAGTTAAGAACATTCCATTCGTTTGCTTTAAGAGA 5 23086742 0.990984398 2 4 46 0.8 0.602059991 0.4 0 0 5 1 0 4 X:23086720-23086754 6 9 5927 FBgn0039945 285.31 7.496666667 11.39666667 0.031544636 1.20053357 0.789704592 -11 -11 -11 0.01 dme-miR-980-5p 7mer-m8 GAAAAAC X 23107387 23107393 + X_23107387_23107393_+ 0.705949576 0.705949576 0.705949576 0 ATbp FBtr0301978 23107329 23108331 X + 23107361 23107397 3'utr ATbp FlyBase G63638.1 TTCCCCAATTAACCACATTGCATCTCGAAAAACCCTG 17 23107379 0.824084631 3 17 82 1 1.322219295 0.047619048 0.235294118 0.380952381 17 0 0 21 X:23107361-23107397 7 ATbp FBtr0301978 23107329 23108331 GAAAAAC 7mer-m8 dme-miR-980-5p X + 23107352 23107391 3'utr ATbp FlyBase G47955.1 GCTCAAAGATTCCCCAATTAACCACATTGCATCTCGAAAA 9 23107379 0.965643166 3 8 41 0.818181818 0.954242509 0 0.222222222 0.363636364 9 2 0 9 X:23107352-23107391 5 12.5 5928 FBgn0039946 68.66666667 3.726666667 5.74 0.182038835 3.354203936 2.177700348 8 8 8 0.01 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG X 2343442 2343448 + X_2343442_2343448_+ 0.70297214 0.70297214 0.70297214 0 phl FBtr0344007|FBtr0070401 2343430|2343430 2343870|2343870 X + 2343419 2343493 stop_codon phl FlyBase G58350.1 TGGGAATATCTAGACAGCGACCTGTACCTGTACTTACATATATCCTGCGTGATCAACGTGATCCTACATCTATAT 197 2343441 0.908237134 10 190 1127 0.96812749 2.084576278 0.011952191 0.208121827 0.378486056 197 7 1 243 X:2343419-2343493 7 phl FBtr0344007|FBtr0070401 2343430|2343430 2343870|2343870 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" X + 2343425 2343471 stop_codon phl FlyBase G44131.1 TATCTAGACAGCGACCTGTACCTGTACTTACATATATCCTGCGTGAT 130 2343441 0.905856282 6 126 716 0.961352657 2.298853076 0 0.415384615 0.632850242 130 8 0 199 X:2343425-2343471 7 160 5929 FBgn0003079 445.6666667 16.59666667 25.57666667 0.359012715 9.640490058 6.255701812 1 1 1 0.01 dme-miR-277-3p 7mer-m8 TGCATTT X 2343653 2343659 + X_2343653_2343659_+ 0.620198593 0.620204266 0.62020143 4.03E-06 phl FBtr0344007|FBtr0070401 2343430|2343430 2343870|2343870 X + 2343571 2343736 3'utr phl FlyBase G58351.1 GAGAGAGAGAGAGAAAGAGAGAGAGATGGGTTGCCTGCCGACCCGGGAGCGAAACTTGCTTCTTTCCTTGGAACTGACAAAGTGCATTTCTGTTACCACACACAAAACGACTACAAACTGTAAACTAAACTGCAACGCCCATGTGTACATAACTGCATCATAACTT 88 2343638 0.980624952 18 82 586 0.944444444 1.707570176 0.25 0.193181818 0.342592593 88 5 1 102 X:2343571-2343736 7 phl FBtr0344007|FBtr0070401 2343430|2343430 2343870|2343870 TGCATTT 7mer-m8 dme-miR-277-3p X + 2343569 2343726 3'utr phl FlyBase G44132.1 GAGAGAGAGAGAGAGAAAGAGAGAGAGATGGGTTGCCTGCCGACCCGGGAGCGAAACTTGCTTCTTTCCTTGGAACTGACAAAGTGCATTTCTGTTACCACACACAAAACGACTACAAACTGTAAACTAAACTGCAACGCCCATGTGTACATAACTGC 68 2343639 0.981873064 19 63 467 0.911764706 1.968482949 0.205882353 0.397058824 0.598039216 68 9 0 93 X:2343569-2343726 7 21 5930 FBgn0003079 445.6666667 16.59666667 25.57666667 0.047120419 1.26531432 0.821060863 15 14 14.5 0.01 dme-miR-14-3p 6mer3-8 AAGACT X 2444528 2444533 - X_2444528_2444533_- 1 1 1 0 boi FBtr0070457|FBtr0334883|FBtr0303887|FBtr0303886|FBtr0070458 2444165|2444165|2444165|2444165|2444165 2445050|2445050|2445050|2445050|2445050 X - 2444477 2444607 3'utr boi FlyBase G64423.1 TGCTGCTTCGTTTTGTTTTAGTTAAATATTGAATTTGAAAATATACAAACTTTAGTATAAGGAATTGGTAATGTAAGACTTTTTTCGTTGCTGCCGGCCAGATAGTCAGTAGAATTACTAATGTTAAGTTT 137 2444536 0.990803267 24 129 1338 0.933333333 2.187520721 0.2 0.145985401 0.290909091 137 11 0 154 X:2444477-2444607 6 boi FBtr0303886|FBtr0070458|FBtr0334883|FBtr0303887|FBtr0070457 2444165|2444165|2444165|2444165|2444165 2445050|2445050|2445050|2445050|2445050 AAGACT 6mer3-8 dme-miR-14-3p X - 2444434 2444577 3'utr boi FlyBase G48554.1 GAATTTGAAAATATACAAACTTTAGTATAAGGAATTGGTAATGTAAGACTTTTTTCGTTGCTGCCGGCCAGATAGTCAGTAGAATTACTAATGTTAAGTTTTTTTTTTTATTATTGATAGAACTATTTCGGGGGCCAAATTTTA 109 2444536 0.790149557 19 98 988 0.917721519 1.860338007 0.208860759 0.348623853 0.550632911 109 12 1 145 X:2444434-2444577 6 93 5931 FBgn0040388 902.53 28.22 43.69666667 0.103043666 3.295535082 2.128308795 3 3 3 0.01 dme-miR-1007-3p 6mer3-8 TGAGCT X 2444683 2444688 - X_2444683_2444688_- 1 1 1 0 boi FBtr0070457|FBtr0334883|FBtr0303887|FBtr0303886|FBtr0070458 2444165|2444165|2444165|2444165|2444165 2445050|2445050|2445050|2445050|2445050 X - 2444661 2444707 3'utr boi FlyBase G64424.1 TCAAGTTTTGTTTTCATTTTGAGCTCATTAAAATGTATTTCGAGCAG 99 2444689 0.790743353 6 99 1251 1 2.041392685 0.154545455 0.090909091 0.181818182 99 0 0 110 X:2444661-2444707 6 boi FBtr0303886|FBtr0070458|FBtr0334883|FBtr0303887|FBtr0070457 2444165|2444165|2444165|2444165|2444165 2445050|2445050|2445050|2445050|2445050 TGAGCT 6mer3-8 dme-miR-1007-3p X - 2444667 2444705 3'utr boi FlyBase G48555.1 AAGTTTTGTTTTCATTTTGAGCTCATTAAAATGTATTTC 49 2444689 0.792873835 4 47 599 0.966666667 1.763427994 0.25 0.183673469 0.333333333 49 2 0 58 X:2444667-2444705 6 74 5932 FBgn0040388 902.53 28.22 43.69666667 0.081991734 2.622253721 1.69349302 1 1 1 0.01 dme-miR-79-3p 8mer-A1 TAGCTTTA X 2444846 2444853 - X_2444846_2444853_- 0.625364009 0.625364009 0.625364009 0 boi FBtr0070457|FBtr0334883|FBtr0303887|FBtr0303886|FBtr0070458 2444165|2444165|2444165|2444165|2444165 2445050|2445050|2445050|2445050|2445050 X - 2444808 2444875 3'utr boi FlyBase G64425.2 GCAGCTCGAAACCCTCGAATATTAGCTTTAAGGCACCCGGTACTGTTTAGTTTTCCAAAAAACCAATT 132 2444854 0.699320215 12 123 872 0.952702703 2.149219113 0.114864865 0.098484848 0.195945946 132 7 0 141 X:2444808-2444875 8 boi FBtr0303886|FBtr0070458|FBtr0334883|FBtr0303887|FBtr0070457 2444165|2444165|2444165|2444165|2444165 2445050|2445050|2445050|2445050|2445050 TAGCTTTA 8mer-A1 dme-miR-79-3p X - 2444737 2445082 stop_codon boi FlyBase G48556.1 CGTCGGGCAGTCTGAACAGTATTGAGGTGTGATGGCTCGCAGAGGAGGCAACTAACTAGTGGACTAGTGGGCGGAGCAGCACAACGAGGAGAAATATACCTAAGCGGCAAGCGAAAGTGGTTCCCCAAAAACAGACAGTTTCAAGTAGACTTAAGGATCCGAAACTAGATGTGTATTATTGAGATAATCGTAGGACAGGTCGGCAGAGCAGCTCGAAACCCTCGAATATTAGCTTTAAGGCACCCGGTACTGTTTAGTTTTCCAAAAAACCAATTAATTTGGCCAATCATTAAGCTTAGAACTAGGGAATTTGCCATTAACAGAAGTTTCTGTCGTTTCAAATGCT 176 2444854 0.971450702 42 168 956 0.966292135 2.411619706 0.183520599 0.380681818 0.5917603 176 9 0 258 X:2444737-2445082 8 80.5 5933 FBgn0040388 902.53 28.22 43.69666667 0.089193711 2.852586818 1.842245785 1 1 1 0.01 dme-miR-995-5p 6mer3-8 AATTCG X 2450296 2450301 + X_2450296_2450301_+ 1 1 1 0 z FBtr0100380|FBtr0070435 2450206|2450206 2450550|2450550 X + 2450228 2450309 3'utr z FlyBase G58360.1 CGCCGACGGTGACGATGATGAGGAGGATGCGGATGCCTATTTGGATCGCTTCAACCATGGGGGCTTTTAATTCGTTAGTTTT 30 2450285 0.984907215 4 29 242 1 1.544068044 0 0.166666667 0.285714286 30 0 0 35 X:2450228-2450309 6 z FBtr0100380|FBtr0070435 2450206|2450206 2450550|2450550 AATTCG 6mer3-8 dme-miR-995-5p X + 2450228 2450308 3'utr z FlyBase G44136.1 CGCCGACGGTGACGATGATGAGGAGGATGCGGATGCCTATTTGGATCGCTTCAACCATGGGGGCTTTTAATTCGTTAGTTT 25 2450285 0.982430348 7 25 190 1 1.505149978 0.03125 0.24 0.40625 25 0 0 32 X:2450228-2450308 6 6 5934 FBgn0004050 445.3333333 22.51333333 34.54 0.013473054 0.266508736 0.173711639 11 11 11 0.01 dme-miR-980-5p 7mer-A1 AAAAACA X 2479705 2479711 - X_2479705_2479711_- 0.782911824 0.782911824 0.782911824 0 trol FBtr0342807|FBtr0342823 2479615|2476257 2480725|2480725 X - 2479697 2479743 3'utr trol FlyBase G64440.1 TGATAAATCTTAAGCTTACCTAAATGGCTGCCAAAAACATTTCTAAT 16 2479719 0.949310096 2 16 74 1 1.230448921 0 0.0625 0.117647059 16 0 0 17 X:2479697-2479743 7 trol FBtr0342807|FBtr0342823 2479615|2476257 2480725|2480725 AAAAACA 7mer-A1 dme-miR-980-5p X - 2479697 2479736 3'utr trol FlyBase G48565.1 TCTTAAGCTTACCTAAATGGCTGCCAAAAACATTTCTAAT 20 2479719 0.953259184 3 20 89 1 1.477121255 0.033333333 0.35 0.566666667 20 0 0 30 X:2479697-2479736 7 17 5935 FBgn0261451 5722.893333 57.96666667 88.76666667 0.002970525 0.293271995 0.191513331 8 8 8 0.01 dme-miR-283-5p 6mer2-7 GATATT X 253663 253668 + X_253663_253668_+ 1 1 1 0 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 X + 253652 253694 3'utr G9a FlyBase G57697.1 AATTGTTTCCCGATATTGTGGGTGTGCGTGTTTCCGGAACGTA 12 253667 0.821747689 7 12 112 1 1.146128036 0.5 0.166666667 0.285714286 12 0 0 14 X:253652-253694 6 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 GATATT 6mer2-7 dme-miR-283-5p X + 253651 253723 3'utr G9a FlyBase G43661.1 AAATTGTTTCCCGATATTGTGGGTGTGCGTGTTTCCGGAACGTAAATGTTTTAAACTTAAAATTAGACTTGGA 10 253683 0.983653906 6 10 78 1 1.113943352 0.538461538 0.2 0.384615385 10 0 0 13 X:253651-253723 6 6.5 5936 FBgn0040372 792.6533333 13.78666667 21.11333333 0.008200306 0.471470019 0.30786233 -4 -20 -12 0.01 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 253766 253773 + X_253766_253773_+ 0.63113665 0.63113665 0.63113665 0 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 X + 253730 253787 3'utr G9a FlyBase G57698.1 CAGGCATAAAATAGAATTGTAATGGAGGAAAGACCATCTAGTCATAAGAATGAAGGAG 50 253766 0.936809497 6 48 185 0.967741935 1.477121255 0.338709677 0.22 0.370967742 50 1 1 60 X:253730-253787 8 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X + 253742 253793 3'utr G9a FlyBase G43662.1 AGAATTGTAATGGAGGAAAGACCATCTAGTCATAAGAATGAAGGAGACAAAG 25 253766 0.913735943 5 25 98 1 1.62324929 0.428571429 0.52 0.714285714 25 0 0 42 X:253742-253793 8 37 5937 FBgn0040372 792.6533333 13.78666667 21.11333333 0.046678666 2.683752418 1.752447111 0 0 0 0.01 dme-miR-190-5p 6mer3-8 ACATAT X 253877 253882 + X_253877_253882_+ 1 1 1 0 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 X + 253858 253968 3'utr G9a FlyBase G57699.1 TGTATGAGCTCTGGAGCATACATATGTAAATACGTGATACGAAAAAGTAATACGTTTGATTTTACCGTTAACCATGAAAATTAGACCGTTTAAATTGACCTGTAATGGGCA 11 253881 0.987485934 9 9 70 0.923076923 1.079181246 0.230769231 0.181818182 0.307692308 11 1 0 12 X:253858-253968 6 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 ACATAT 6mer3-8 dme-miR-190-5p X + 253870 253899 3'utr G9a FlyBase G43663.1 GGAGCATACATATGTAAATACGTGATACGA 5 253881 0.631984841 3 3 19 0.8 0.602059991 0 0.25 0.4 4 1 0 4 X:253870-253899 6 4 5938 FBgn0040372 792.6533333 13.78666667 21.11333333 0.005046342 0.290135397 0.189453742 -4 -4 -4 0.01 dme-miR-304-5p 8mer-A1 TGAGATTA X 2583759 2583766 - X_2583759_2583766_- 0.625363359 0.625363359 0.625363359 0 CG13760 FBtr0308567|FBtr0300707 2583743|2583743 2584291|2584291 X - 2583741 2583776 3'utr CG13760 FlyBase G64452.1 AGAAAATAAATGAGATTATTGTTCCAAATGTGAGCC 6 2583766 0.969312862 2 6 36 1 0.903089987 0.25 0.166666667 0.375 6 0 0 8 X:2583741-2583776 8 CG13760 FBtr0300707|FBtr0308567 2583743|2583743 2584291|2584291 TGAGATTA 8mer-A1 dme-miR-304-5p X - 2583751 2583786 3'utr CG13760 FlyBase G48573.1 ATGTATATGTAGAAAATAAATGAGATTATTGTTCCA 8 2583766 0.892965065 2 8 67 1 1.113943352 0.076923077 0.375 0.615384615 8 0 0 13 X:2583751-2583786 8 7 5939 FBgn0040375 102.9966667 8.843333333 13.49 0.067963365 0.791556728 0.518902891 0 0 0 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 2584163 2584169 - X_2584163_2584169_- 0.801970298 0.801190496 0.801580397 0.000551402 CG13760 FBtr0308567|FBtr0308567|FBtr0308567|FBtr0300707|FBtr0300707|FBtr0300707 2583743|2583743|2583743|2583743|2583743|2583743 2584291|2584291|2584291|2584291|2584291|2584291 X - 2584114 2584254 3'utr CG13760 FlyBase G64453.1 CAGATGAATTGATGAACAGATGAACAGAAGTACCTGCCGTCGCCAGGTTGCCAGGTGATGAGAACGGATGATTGGAATCTGCGCTTGTGATATTAGGACTTTAGGAGGAGACCTTGTAGGGGGGGACTTCGAGTGGGAGGT 257 2584171 0.986532939 24 233 1991 0.9 1.638489257 0.306896552 0.120622568 0.220689655 257 24 5 261 X:2584114-2584254 7 CG13760 FBtr0300707|FBtr0300707|FBtr0300707|FBtr0308567|FBtr0308567|FBtr0308567 2583743|2583743|2583743|2583743|2583743|2583743 2584291|2584291|2584291|2584291|2584291|2584291 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 2584119 2584268 3'utr CG13760 FlyBase G48574.1 GATGAACAAATGAACAGATGAATTGATGAACAGATGAACAGAAGTACCTGCCGTCGCCAGGTTGCCAGGTGATGAGAACGGATGATTGGAATCTGCGCTTGTGATATTAGGACTTTAGGAGGAGACCTTGTAGGGGGGGACTTCGAGTGG 241 2584171 0.985010102 27 220 1786 0.924637681 1.901730692 0.31884058 0.315352697 0.52173913 241 23 3 319 X:2584119-2584268 7 172.5 5940 FBgn0040375 102.9966667 8.843333333 13.49 1.674811483 19.50621937 12.78724981 2 2 2 0.01 dme-bantam-3p 6mer3-8 TGATCT X 2588033 2588038 + X_2588033_2588038_+ 1 1 1 0 wds FBtr0308566 2587628 2588217 X + 2587936 2588067 3'utr wds FlyBase G58370.1 ATTAGCCTATTGTATTGGCCCACCATGCAAGCGAGAATATTCCCCCAAAATTGTTTGTAACCTTTGACACAGCCACGCAAACCAACATAACTTATAATGATCTTTCGGTGACGAGAAAACTAAATTTAAGCG 184 2588033 0.986420856 14 179 1531 0.976525822 2.318063335 0.34741784 0.114130435 0.234741784 184 5 0 208 X:2587936-2588067 6 wds FBtr0308566 2587628 2588217 TGATCT 6mer3-8 dme-bantam-3p X + 2588015 2588066 3'utr wds FlyBase G44142.1 AACCAACATAACTTATAATGATCTTTCGGTGACGAGAAAACTAAATTTAAGC 91 2588033 0.768524075 7 87 756 0.95862069 1.841984805 0.427586207 0.417582418 0.634482759 91 5 1 139 X:2588015-2588066 6 133 5941 FBgn0040066 310 19.74666667 30.31666667 0.429032258 6.735313977 4.387025838 0 0 0 0.01 dme-miR-14-3p 6mer3-8 AAGACT X 2606789 2606794 + X_2606789_2606794_+ 1 1 1 0 Zw10 FBtr0070441 2606528 2606824 X + 2606763 2606811 3'utr Zw10 FlyBase G58405.1 CCGCAACGCAACACAATATTTAACTTAAGACTTATTTAAATGAATAAAA 14 2606797 0.988322601 6 14 130 1 1.204119983 0.0625 0.142857143 0.25 14 0 0 16 X:2606763-2606811 6 Zw10 FBtr0070441 2606528 2606824 AAGACT 6mer3-8 dme-miR-14-3p X + 2606777 2606812 3'utr Zw10 FlyBase G44173.1 AATATTTAACTTAAGACTTATTTAAATGAATAAAAA 8 2606798 0.702054497 3 7 71 0.909090909 1 0 0.25 0.454545455 8 1 0 10 X:2606777-2606812 6 10.5 5942 FBgn0004643 521.4966667 24.47 37.23 0.020134357 0.429096853 0.28203062 -8 -9 -8.5 0.01 dme-miR-277-3p 8mer-A1 TGCATTTA X 2617896 2617903 - X_2617896_2617903_- 0.625364269 0.625364269 0.625364269 0 Tsp3A FBtr0307159 2617756 2618435 X - 2617882 2617920 3'utr Tsp3A FlyBase G64495.1 TACTCGCTGAAATTCGATGCATTTATTTATATGTAATTC 20 2617904 0.788522122 6 17 203 0.869565217 1.301029996 0.47826087 0.15 0.260869565 20 3 0 20 X:2617882-2617920 8 Tsp3A FBtr0307159 2617756 2618435 TGCATTTA 8mer-A1 dme-miR-277-3p X - 2617822 2617920 3'utr Tsp3A FlyBase G48605.1 TACTCGCTGAAATTCGATGCATTTATTTATATGTAATTCCTTCGAAAAAAAAGCAACAAACAGTGCGCACAAATCTTGAATATCTATTCATCCAGAACC 30 2617904 0.978834267 11 24 220 0.80952381 0.929418926 0.285714286 0.333333333 0.523809524 30 5 3 34 X:2617822-2617920 8 17 5943 FBgn0040334 330.6633333 22.46333333 34.46666667 0.051411809 0.756788841 0.493230174 1 1 1 0.01 dme-miR-34-5p 6mer2-7 ACTGCC X 2618037 2618042 - X_2618037_2618042_- 1 1 1 0 Tsp3A FBtr0307159 2617756 2618435 X - 2618021 2618104 3'utr Tsp3A FlyBase G64497.1 TACTTGCATGTTTTGTGCGAGGTGTGTGTATTTTCAATTCCATATTACTTATGTTGTAATCGACTGCCTGGATAGCTGTATATA 26 2618036 0.817471291 10 25 216 0.96875 1.491361694 0.25 0.192307692 0.34375 26 1 0 31 X:2618021-2618104 6 Tsp3A FBtr0307159 2617756 2618435 ACTGCC 6mer2-7 dme-miR-34-5p X - 2618015 2618054 3'utr Tsp3A FlyBase G48607.1 ATGTTGTAATCGACTGCCTGGATAGCTGTATATACTCGTA 14 2618050 0.785712331 6 14 99 1 1.230448921 0.235294118 0.142857143 0.294117647 14 0 0 17 X:2618015-2618054 6 17 5944 FBgn0040334 330.6633333 22.46333333 34.46666667 0.051411809 0.756788841 0.493230174 -6 8 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 2621819 2621825 + X_2621819_2621825_+ 0.823349562 0.823349562 0.823349562 0 Seipin FBtr0070442 2621718 2622140 X + 2621754 2621887 3'utr Seipin FlyBase G58413.1 ATGGAACGAAAGAGGGACCACCATTAACCACCGAAGGCTAGACCAACGCCCGTGCGACGCTTGAGCCAAAGACTAAATAGATTTAGGACTAAGTTAGTGAACACAGCCAGCTGAAGTATTCCGGCGGATTAGCT 89 2621815 0.962228355 14 82 416 0.91 1.481920138 0.14 0.101123596 0.2 89 7 2 91 X:2621754-2621887 7 Seipin FBtr0070442 2621718 2622140 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X + 2621760 2621854 3'utr Seipin FlyBase G44177.1 CGAAAGAGGGACCACCATTAACCACCGAAGGCTAGACCAACGCCCGTGCGACGCTTGAGCCAAAGACTAAATAGATTTAGGACTAAGTTAGTGAA 61 2621815 0.958105488 10 56 267 0.928571429 1.658011397 0.102040816 0.426229508 0.642857143 61 6 1 91 X:2621760-2621854 7 61 5945 FBgn0040336 110.8766667 6.436666667 9.653333333 0.550160839 9.476954946 6.319060773 4 4 4 0.01 dme-miR-277-3p 7mer-m8 TGCATTT X 2621992 2621998 + X_2621992_2621998_+ 0.620204266 0.620204266 0.620204266 0 Seipin FBtr0070442 2621718 2622140 X + 2621940 2622107 3'utr Seipin FlyBase G58414.1 TAGGTATTAATTATTGATCCAGTTAGAGATTGCCTTGTAGATTGCTGAACTTTGCATTTTCGATGCAGTTGCTCATTCGTTGTTATCTATGCCCAGTTGGGAACCTTCCCATTGCAAGCCAATTAGCTTAAGAAAAAAGCATTCCATTTGTACATGAAATTTTAGCAA 28 2621991 0.98623781 13 28 236 1 1.491361694 0.322580645 0.107142857 0.193548387 28 0 0 31 X:2621940-2622107 7 Seipin FBtr0070442 2621718 2622140 TGCATTT 7mer-m8 dme-miR-277-3p X + 2621958 2622027 3'utr Seipin FlyBase G44178.1 CCAGTTAGAGATTGCCTTGTAGATTGCTGAACTTTGCATTTTCGATGCAGTTGCTCATTCGTTGTTATCT 8 2621991 0.980722673 6 7 66 1 0.954242509 0.111111111 0.125 0.222222222 8 0 0 9 X:2621958-2622027 7 5.5 5946 FBgn0040336 110.8766667 6.436666667 9.653333333 0.049604666 0.854479544 0.569751381 1 1 1 0.01 dme-miR-305-5p 6mer2-7 GTACAA X 2633606 2633611 + X_2633606_2633611_+ 1 1 1 0 PI4KIIIalpha FBtr0331587 2633296 2633672 X + 2633561 2633647 3'utr PI4KIIIalpha FlyBase G58443.1 ATTTATAAATATTAAATCAATTATAGGGCAATATGTTATATAATGGTACAACAAGAAATGTATTATTAGAGGGAAGTGGATGTCGTT 16 2633604 0.983540521 5 14 113 0.913043478 1.021189299 0.217391304 0.3125 0.52173913 16 1 1 21 X:2633561-2633647 6 PI4KIIIalpha FBtr0331587 2633296 2633672 GTACAA 6mer2-7 dme-miR-305-5p X + 2633559 2633656 3'utr PI4KIIIalpha FlyBase G44204.1 ATATTTATAAATATTAAATCAATTATAGGGCAATATGTTATATAATGGTACAACAAGAAATGTATTATTAGAGGGAAGTGGATGTCGTTTTTGGTGGT 13 2633603 0.983686763 7 13 104 1 1.230448921 0.470588235 0.307692308 0.470588235 13 0 0 17 X:2633559-2633656 6 8.5 5947 FBgn0267350 1055.98 18.11666667 27.74666667 0.008049395 0.469181233 0.306343104 2 3 2.5 0.01 dme-miR-1006-3p 6mer3-8 CGAATT X 2676195 2676200 + X_2676195_2676200_+ 0.507200502 0.507200502 0.507200502 0 sgg FBtr0070469 2674603 2676657 X + 2676165 2676244 3'utr sgg FlyBase G58470.1 GAAAAAAAAGAAAAAATGAGAAGAACGAAGCGAATTGCATAAGCGATATGATGAAAAATGATGAGCAAAAAACTTATATT 22 2676204 0.941001942 6 22 87 1 1.462397998 0.413793103 0.227272727 0.413793103 22 0 0 29 X:2676165-2676244 6 sgg FBtr0070469 2674603 2676657 CGAATT 6mer3-8 dme-miR-1006-3p X + 2676183 2676218 3'utr sgg FlyBase G44222.1 AGAAGAACGAAGCGAATTGCATAAGCGATATGATGA 10 2676203 0.947772571 3 10 43 1 1.204119983 0.75 0.4 0.625 10 0 0 16 X:2676183-2676218 6 13 5948 FBgn0003371 2221.836667 76.45666667 117.92 0.005851015 0.170030954 0.110244233 -9 -8 -8.5 0.01 dme-miR-7-5p 6mer3-8 GTCTTC X 2695020 2695025 - X_2695020_2695025_- 1 1 1 0 CG2658 FBtr0070502|FBtr0345716 2694721|2694390 2695063|2695063 X - 2694950 2695039 3'utr CG2658 FlyBase G64508.1 AAGTCATAGCCATAGTCTTCGTACGCCACGTGCCCCTAGTCGCTCACCTTTTCGCCCGCCCCTGGCTCATGTGCGTTGAATGTAAATAAA 12 2695032 0.969947572 9 11 62 0.933333333 1.146128036 0.133333333 0.166666667 0.333333333 12 1 0 14 X:2694950-2695039 6 CG2658 FBtr0070502|FBtr0345716 2694721|2694390 2695063|2695063 GTCTTC 6mer3-8 dme-miR-7-5p X - 2694946 2695049 3'utr CG2658 FlyBase G48614.1 CTCAGATCGCAAGTCATAGCCATAGTCTTCGTACGCCACGTGCCCCTAGTCGCTCACCTTTTCGCCCGCCCCTGGCTCATGTGCGTTGAATGTAAATAAAGTTG 15 2695033 0.973421513 8 15 90 1 1.342422681 0.090909091 0.266666667 0.5 15 0 0 22 X:2694946-2695049 6 6 5949 FBgn0024992 506.2333333 20.17 30.76333333 0.011852242 0.297471492 0.195037382 7 8 7.5 0.01 dme-miR-308-3p 7mer-m1 TGTGATT X 269695 269701 - X_269695_269701_- 0.521196729 0.521148108 0.521172418 3.44E-05 ewg FBtr0332978|FBtr0332976|FBtr0332977|FBtr0308209|FBtr0089441|FBtr0308208 269590|269590|269590|269609|269609|269609 273303|270568|270568|270568|270568|270568 X - 269658 269728 3'utr ewg FlyBase G63738.1 AAATTTTATTTAAAAAAAAGCGATTGTTGTGATTTTAATATAATTTTACCTTAAAATATTTGCTTGTACAT 89 269704 0.98749666 8 88 922 0.990291262 2.008600172 0.097087379 0.146067416 0.262135922 89 1 0 102 X:269658-269728 7 ewg FBtr0089441|FBtr0308208|FBtr0332977|FBtr0308209|FBtr0332976|FBtr0332978 269609|269609|269590|269609|269590|269590 270568|270568|270568|270568|270568|273303 TGTGATT 7mer-m1 dme-miR-308-3p X - 269676 269728 3'utr ewg FlyBase G48050.1 AAATTTTATTTAAAAAAAAGCGATTGTTGTGATTTTAATATAATTTTACCTTA 55 269704 0.81827912 7 53 576 0.973684211 1.86923172 0.065789474 0.254545455 0.460526316 55 2 0 74 X:269676-269728 7 71.5 5950 FBgn0005427 485.9333333 14.70333333 22.51 0.147139525 4.862842893 3.17636606 3 3 3 0.01 dme-miR-968-5p 7mer-m8 ACTACTT X 2701347 2701353 - X_2701347_2701353_- 0.631525327 0.600759894 0.616142611 0.021754423 Csat FBtr0070501|FBtr0273276|FBtr0345710 2701122|2701122|2701122 2701837|2701837|2701837 X - 2701334 2701389 3'utr Csat FlyBase G64516.1 AAGTTACACTTGATGTTCGGCCAATTCACAGCCACAACTACTTTTGTTCGAATTTT 37 2701365 0.83516856 6 37 203 1 1.62324929 0.547619048 0.108108108 0.214285714 37 0 0 42 X:2701334-2701389 7 Csat FBtr0070501|FBtr0273276|FBtr0345710 2701122|2701122|2701122 2701837|2701837|2701837 ACTACTT 7mer-m8 dme-miR-968-5p X - 2701335 2701385 3'utr Csat FlyBase G48622.1 TACACTTGATGTTCGGCCAATTCACAGCCACAACTACTTTTGTTCGAATTT 11 2701365 0.952472023 3 11 52 1 1.278753601 0.315789474 0.454545455 0.684210526 11 0 0 19 X:2701335-2701385 7 18 5951 FBgn0024994 444.48 26.71666667 40.92 0.04049676 0.673736744 0.439882698 12 12 12 0.01 dme-miR-1006-3p 7mer-A1 GAATTTA X 270379 270385 - X_270379_270385_- 0.823349562 0.823349562 0.823349562 0 ewg FBtr0332978|FBtr0332976|FBtr0332977|FBtr0308209|FBtr0089441|FBtr0308208 269590|269590|269590|269609|269609|269609 273303|270568|270568|270568|270568|270568 X - 270351 270492 3'utr ewg FlyBase G63743.1 TGAAAAAATGCACTTGCCATTTAAACTTAGACGCGCACATTGTGAATGCCAAAAAATCTAAATAGTTATAGCCAAAGGAAATCCCTCAGTTACTAACTATACAAATTGAATTTAGTGCCGGGAATAGAAAACCAAAAATTTT 249 270377 0.962463436 17 243 1343 0.976744186 1.866287339 0.139534884 0.172690763 0.315614618 249 4 3 294 X:270351-270492 7 ewg FBtr0089441|FBtr0308208|FBtr0332977|FBtr0308209|FBtr0332976|FBtr0332978 269609|269609|269590|269609|269590|269590 270568|270568|270568|270568|270568|273303 GAATTTA 7mer-A1 dme-miR-1006-3p X - 270350 270400 3'utr ewg FlyBase G48054.1 CTAACTATACAAATTGAATTTAGTGCCGGGAATAGAAAACCAAAAATTTTT 116 270377 0.861121674 8 113 609 0.982035928 1.737722593 0.191616766 0.318965517 0.526946108 116 1 2 164 X:270350-270400 7 146 5952 FBgn0005427 485.9333333 14.70333333 22.51 0.300452737 9.929721152 6.486006219 -8 -8 -8 0.01 dme-bantam-3p 8mer-A1 TGATCTCA X 270995 271002 - X_270995_271002_- 0.631136385 0.631136385 0.631136385 0 ewg FBtr0332978 269590 273303 X - 270977 271032 3'utr ewg FlyBase G63747.1 TGGGAAATGGCGGCGTTCAGTGCTATTCGCTGATCTCAGCGGGATCGTCAGTCCTA 57 271002 0.781620344 6 52 383 0.955223881 1.329058719 0.253731343 0.175438596 0.298507463 57 1 2 64 X:270977-271032 8 ewg FBtr0332978 269590 273303 TGATCTCA 8mer-A1 dme-bantam-3p X - 270969 271041 3'utr ewg FlyBase G48057.1 CATCCTCTTTGGGAAATGGCGGCGTTCAGTGCTATTCGCTGATCTCAGCGGGATCGTCAGTCCTAAGCCGGCG 35 271002 0.814625189 5 31 219 0.898305085 1.72427587 0.220338983 0.558823529 0.745762712 34 6 0 53 X:270969-271041 8 41.5 5953 FBgn0005427 485.9333333 14.70333333 22.51 0.085402662 2.822489231 1.843625056 0 0 0 0.01 dme-bantam-3p 8mer-A1 TGATCTCA X 271178 271185 - X_271178_271185_- 0.631136385 0.631136385 0.631136385 0 ewg FBtr0332978|FBtr0100578|FBtr0100582 269590|268507|268507 273303|271561|271561 X - 271121 271211 intron-5'utr ewg FlyBase G63748.1 AGGATATCCCGTTTCGGTGAGCAATGTGATCTCAGTTCCCGTCTCTATGTACCAGTCGGTAATGGCCAACGTGCAGCAGATCCAGACGAAC 63 271185 0.987010927 12 61 528 0.958333333 1.838849091 0.166666667 0.142857143 0.25 63 3 0 69 X:271121-271211 8 ewg FBtr0100582|FBtr0332978|FBtr0100578 268507|269590|268507 271561|273303|271561 TGATCTCA 8mer-A1 dme-bantam-3p X - 271136 271211 intron-5'utr ewg FlyBase G48058.1 AGGATATCCCGTTTCGGTGAGCAATGTGATCTCAGTTCCCGTCTCTATGTACCAGTCGGTAATGGCCAACGTGCAG 53 271186 0.983633203 9 50 422 0.942857143 1.342422681 0.228571429 0.264150943 0.442857143 53 2 2 66 X:271136-271211 8 55 5954 FBgn0005427 485.9333333 14.70333333 22.51 0.11318425 3.740648379 2.443358507 0 1 0.5 0.01 dme-miR-968-5p 6mer2-7 CTACTT X 2717234 2717239 + X_2717234_2717239_+ 0.959356853 0.952670052 0.956013452 0.004728282 CG2694 FBtr0070481|FBtr0070482|FBtr0310649 2717107|2717107|2717107 2717654|2717654|2717654 X + 2717194 2717288 3'utr CG2694 FlyBase G58487.1 AAAATGGAGCAGCCTCCAGTGAAAACGAACACGCTGTGACCTACTTTATATACCTACCTACATTTTATACAAACTTCTATAACCTGTACAATGGC 98 2717228 0.869808934 13 96 530 0.983870968 1.785329835 0 0.183673469 0.35483871 98 1 1 122 X:2717194-2717288 6 CG2694 FBtr0070482|FBtr0310649|FBtr0070481 2717107|2717107|2717107 2717654|2717654|2717654 CTACTT 6mer2-7 dme-miR-968-5p X + 2717194 2717250 3'utr CG2694 FlyBase G44236.1 AAAATGGAGCAGCCTCCAGTGAAAACGAACACGCTGTGACCTACTTTATATACCTAC 65 2717228 0.878982731 8 61 325 0.965909091 1.62838893 0.022727273 0.261538462 0.454545455 65 2 1 85 X:2717194-2717250 6 74 5955 FBgn0024991 290.3333333 11.33666667 17.40333333 0.254879449 6.527491914 4.252058993 6 6 6 0.01 dme-miR-190-5p 6mer3-8 ACATAT X 2734735 2734740 - X_2734735_2734740_- 1 1 1 0 crm FBtr0070495|FBtr0070496 2734246|2734246 2735002|2735002 X - 2734715 2734817 3'utr crm FlyBase G64551.1 TATGTTTTTACGCGACTTTTTGTGATCTATACTCATTTTATGTATGCCAAGTATTAGCAAGCACTCACATTGTCTGAACATATATATTTATTTATACATTAAC 239 2734748 0.777182562 16 230 1811 0.967105263 1.62324929 0.381578947 0.217573222 0.384868421 239 4 6 294 X:2734715-2734817 6 crm FBtr0070495|FBtr0070496 2734246|2734246 2735002|2735002 ACATAT 6mer3-8 dme-miR-190-5p X - 2734725 2734769 3'utr crm FlyBase G48644.1 AAGTATTAGCAAGCACTCACATTGTCTGAACATATATATTTATTT 76 2734748 0.757920324 4 72 483 0.952380952 1.77815125 0.079365079 0.434210526 0.658730159 76 5 1 120 X:2734725-2734769 6 92 5956 FBgn0000376 219.6566667 6.966666667 10.63 0.418835455 13.20574163 8.654750706 8 8 8 0.01 dme-bantam-3p 6mer3-8 TGATCT X 2734790 2734795 - X_2734790_2734795_- 0.999990913 0.99999998 0.999995447 6.43E-06 crm FBtr0070495|FBtr0070496 2734246|2734246 2735002|2735002 X - 2734715 2734817 3'utr crm FlyBase G64551.1 TATGTTTTTACGCGACTTTTTGTGATCTATACTCATTTTATGTATGCCAAGTATTAGCAAGCACTCACATTGTCTGAACATATATATTTATTTATACATTAAC 239 2734796 0.777182562 16 230 1811 0.967105263 1.62324929 0.381578947 0.217573222 0.384868421 239 4 6 294 X:2734715-2734817 6 crm FBtr0070495|FBtr0070496 2734246|2734246 2735002|2735002 TGATCT 6mer3-8 dme-bantam-3p X - 2734779 2734816 3'utr crm FlyBase G48645.1 ATGTTTTTACGCGACTTTTTGTGATCTATACTCATTTT 108 2734796 0.648362768 10 108 942 1 2.176091259 0.806666667 0.314814815 0.506666667 108 0 0 150 X:2734779-2734816 6 114.5 5957 FBgn0000376 219.6566667 6.966666667 10.63 0.52126804 16.4354067 10.77140169 1 1 1 0.01 dme-miR-283-5p 8mer-A1 TGATATTA X 2734865 2734872 - X_2734865_2734872_- 0.592192292 0.592192292 0.592192292 0 crm FBtr0070495|FBtr0070496 2734246|2734246 2735002|2735002 X - 2734840 2734898 3'utr crm FlyBase G64552.1 GTGTGCCTCCAAGCCTCATGTCCCACTGATATTACTCATTACTCACTCATCCCACCCAC 11 2734873 0.971848226 7 11 64 1 1.041392685 0.363636364 0 0 11 0 0 11 X:2734840-2734898 8 crm FBtr0070495|FBtr0070496 2734246|2734246 2735002|2735002 TGATATTA 8mer-A1 dme-miR-283-5p X - 2734838 2734873 3'utr crm FlyBase G48646.1 CTGATATTACTCATTACTCACTCATCCCACCCACCC 5 2734872 0.971902486 4 4 17 1 0.698970004 0.4 0 0 5 0 0 5 X:2734838-2734873 8 7 5958 FBgn0000376 219.6566667 6.966666667 10.63 0.031867915 1.004784689 0.658513641 1 0 0.5 0.01 dme-miR-277-3p 8mer-A1 TGCATTTA X 2949079 2949086 + X_2949079_2949086_+ 0.625364269 0.625364269 0.625364269 0 CG3603 FBtr0332493 2948923 2949120 X + 2949060 2949098 3'utr CG3603 FlyBase G58505.1 AAGAGTAGGACCAGATTATTGCATTTACTTGTCAAGCCA 25 2949078 0.747567587 3 25 220 1 1.447158031 0.535714286 0.12 0.214285714 25 0 0 28 X:2949060-2949098 8 CG3603 FBtr0332493 2948923 2949120 TGCATTTA 8mer-A1 dme-miR-277-3p X + 2949060 2949092 3'utr CG3603 FlyBase G44249.1 AAGAGTAGGACCAGATTATTGCATTTACTTGTC 17 2949078 0.718231916 4 16 149 0.913043478 1.322219295 0.217391304 0.352941176 0.52173913 17 2 0 21 X:2949060-2949092 8 21 5959 FBgn0029648 25 3.55 5.413333333 0.84 5.915492958 3.879310345 1 1 1 0.01 dme-miR-308-3p 7mer-m1 TGTGATT X 3132826 3132832 + X_3132826_3132832_+ 0.521223855 0.521223855 0.521223855 0 kirre FBtr0309501 3132424 3134532 X + 3132812 3132855 3'utr kirre FlyBase G58507.1 AACAAAAACCGTATTGTGATTTATAGCGTTAATTATTTTATGGC 25 3132825 0.743187544 4 23 264 0.928571429 1.414973348 0 0.12 0.214285714 25 2 0 26 X:3132812-3132855 7 kirre FBtr0309501 3132424 3134532 TGTGATT 7mer-m1 dme-miR-308-3p X + 3132815 3132847 3'utr kirre FlyBase G44251.1 AAAAACCGTATTGTGATTTATAGCGTTAATTAT 17 3132832 0.611854312 4 16 162 1 1.342422681 0.136363636 0.294117647 0.454545455 17 0 0 22 X:3132815-3132847 7 20.5 5960 FBgn0028369 20.34666667 0.466666667 0.723333333 1.007536042 43.92857143 28.34101382 1 -6 -2.5 0.01 dme-miR-79-3p 6mer3-8 TAGCTT X 3385426 3385431 + X_3385426_3385431_+ 0.999999999 0.999654052 0.999827025 0.000244588 dm FBtr0331605|FBtr0070525 3385311|3385311 3391697|3386011 X + 3385403 3385460 5'utr dm FlyBase G58549.1 TTTTTTTGCAATTTACTTTGATTTAGCTTCGATCCTTTCTTGACATTAAGCCCTAAAT 14 3385441 0.975818322 9 13 141 1 1.204119983 0.3125 0.142857143 0.25 14 0 0 16 X:3385403-3385460 6 dm FBtr0331605|FBtr0070525 3385311|3385311 3391697|3386011 TAGCTT 6mer3-8 dme-miR-79-3p X + 3385412 3385458 5'utr dm FlyBase G44284.1 AATTTACTTTGATTTAGCTTCGATCCTTTCTTGACATTAAGCCCTAA 7 3385442 0.989356399 3 6 55 1 0.84509804 0 0 0 7 0 0 7 X:3385412-3385458 6 6 5961 FBgn0262656 5210.653333 68.99333333 106.66 0.001151487 0.086964924 0.056253516 -15 -16 -15.5 0.01 dme-miR-988-3p 8mer-m1 ACAAGGGG X 3385571 3385578 + X_3385571_3385578_+ 0.6282351 0.6282351 0.6282351 0 dm FBtr0331605|FBtr0070525 3385311|3385311 3391697|3386011 X + 3385555 3385841 5'utr dm FlyBase G58551.1 TACCATACCATACCATACAAGGGGTTAGAGTTTACGAGTGATTTAACAAATTTGATTTCTTCAATGTGATATATATATGATTTTCTTTCCGCGCGATTTGATTTGGTAGGGAAAGGTTAACGAAAGCGGTTTTATGAAATCAATTTGAAGTGTTTTTTTTTCGCTGCATATATTACAATATACACGTATGGATTAGATTTAATTAACAATTAGCGGTCTGTATATAACATATGAAGTAGAATATCTTAATTATTTTTTTGAATTAGTTACTTAACCATGAAGTAAAC 664 3385570 0.977674322 62 611 4768 0.914540816 1.679427897 0.275510204 0.155120482 0.284438776 664 53 14 717 X:3385555-3385841 8 dm FBtr0331605|FBtr0070525 3385311|3385311 3391697|3386011 ACAAGGGG 8mer-m1 dme-miR-988-3p X + 3385555 3385714 5'utr dm FlyBase G44286.1 TACCATACCATACCATACAAGGGGTTAGAGTTTACGAGTGATTTAACAAATTTGATTTCTTCAATGTGATATATATATGATTTTCTTTCCGCGCGATTTGATTTGGTAGGGAAAGGTTAACGAAAGCGGTTTTATGAAATCAATTTGAAGTGTTTTTTTT 297 3385570 0.91509451 39 263 2207 0.891304348 1.567026366 0.20531401 0.32996633 0.519323671 297 36 9 369 X:3385555-3385714 8 282 5962 FBgn0262656 5210.653333 68.99333333 106.66 0.054119893 4.087351435 2.643915245 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 3385885 3385890 + X_3385885_3385890_+ 0.999998095 0.999999999 0.999999047 1.34E-06 dm FBtr0331605|FBtr0070525 3385311|3385311 3391697|3386011 X + 3385854 3385946 5'utr dm FlyBase G58552.1 ATTTAAAAAACACAAAAAATGAGGACAAAGAACCAAACATTGAAAAGTGAAAGGAATAGTTAGAAATGACAGACCTAGCGGAGAAACGAAACA 25 3385873 0.960998662 5 21 55 0.857142857 1.079181246 0.178571429 0.12 0.214285714 25 3 1 24 X:3385854-3385946 6 dm FBtr0331605|FBtr0070525 3385311|3385311 3391697|3386011 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 3385857 3385907 5'utr dm FlyBase G44288.1 TAAAAAACACAAAAAATGAGGACAAAGAACCAAACATTGAAAAGTGAAAGG 8 3385873 0.568867472 4 7 9 0.923076923 1.079181246 0.230769231 0.5 0.692307692 8 1 0 12 X:3385857-3385907 6 10 5963 FBgn0262656 5210.653333 68.99333333 106.66 0.001919145 0.14494154 0.09375586 12 12 12 0.01 dme-miR-304-5p 6mer3-8 TGAGAT X 3386098 3386103 + X_3386098_3386103_+ 0.999999999 0.999999999 0.999999999 0 dm FBtr0331605 3385311 3391697 X + 3386051 3386137 3'utr dm FlyBase G58555.1 GAGCCACAAAGAGGAGATAGAGCACACAAAGTTGGGAGCGAGAACGATGAGATATATACTTATATAACATCTATATATCTATATATC 67 3386098 0.976643017 8 65 326 0.974683544 1.58546073 0.113924051 0.179104478 0.303797468 67 1 1 77 X:3386051-3386137 6 dm FBtr0331605 3385311 3391697 TGAGAT 6mer3-8 dme-miR-304-5p X + 3386042 3386119 3'utr dm FlyBase G44289.1 ACAACGAAGGAGCCACAAAGAGGAGATAGAGCACACAAAGTTGGGAGCGAGAACGATGAGATATATACTTATATAACA 53 3386098 0.959554018 9 50 226 0.96969697 1.806179974 0.090909091 0.20754717 0.363636364 53 2 0 64 X:3386042-3386119 6 50 5964 FBgn0262656 5210.653333 68.99333333 106.66 0.009595726 0.724707701 0.468779299 0 0 0 0.01 dme-miR-31a-5p 6mer3-8 TCTTGC X 3386419 3386424 + X_3386419_3386424_+ 0.999999999 0.999999998 0.999999998 0 dm FBtr0331605 3385311 3391697 X + 3386354 3386443 3'utr dm FlyBase G58556.1 GGGTCCTATATTCTTAGAGACGCATCCTTGGAGGAGAAAAGAAACCCAAAATGTATCTGCATGCATCTTGCATGCACACAATTCAATGCT 34 3386406 0.953842026 11 33 152 1 1.662757832 0.239130435 0.264705882 0.456521739 34 0 0 46 X:3386354-3386443 6 dm FBtr0331605 3385311 3391697 TCTTGC 6mer3-8 dme-miR-31a-5p X + 3386254 3386458 3'utr dm FlyBase G44291.1 ATGGAACACGATGATTTAATTCGACCTTGGTTCGCTAGTTTATTAACAAAATTACCTATTTAAACCATGGACATGTTTTTAACATGCGCTTTTTTTTTTTGGGTCCTATATTCTTAGAGACGCATCCTTGGAGGAGAAAAGAAACCCAAAATGTATCTGCATGCATCTTGCATGCACACAATTCAATGCTTTTGCTTAGAACCCC 59 3386405 0.97930459 20 54 372 0.918604651 1.596597096 0.104651163 0.322033898 0.534883721 59 6 1 79 X:3386254-3386458 6 11.5 5965 FBgn0262656 5210.653333 68.99333333 106.66 0.002207017 0.166682771 0.107819239 13 14 13.5 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT X 3387014 3387019 + X_3387014_3387019_+ 0.999999993 0.999999996 0.999999994 0 dm FBtr0331605 3385311 3391697 X + 3386759 3387188 3'utr dm FlyBase G58557.2 ATATATTTTTTAACTGATAACTATGCATATGAAATGCGCAAAACTTAACGAAAACAAAACGGAATTAAGGAAACATTAAACTATATAATAGTGCTAAGCCGCGCCTAACCTCTCGAGATATATATAGTTAGGATGAGAGATAGGAAGAGTGTAGAAATTGGCTGCAAAGTTTGTGATTGGAGTTAAGAGAGGAGAGACCCAGAGAGAGATATATACACCCACGACCCAAGACCCAAGAAAACTCAAACTTTTGTGAGCTGTTTAACTGTCGATTTTTTGCTAATAAGTTATAGCCTTCCGGCGATATGTTATATATATATATATGTTATAACGATTCTACCAATTGTTTACACGCATCTAAGTATCAACTAAACTAAAAACTACTACTAAACTAATGGACATGAAGCATAAGGCAAATGCAAATGAAGTT 1579 3387033 0.918198984 82 1389 15981 0.884320175 1.67615545 0.270833333 0.132995567 0.249451754 1579 178 33 1613 X:3386759-3387188 6 dm FBtr0331605 3385311 3391697 AGCTGT 6mer3-8 dme-miR-1008-3p X + 3386817 3387087 3'utr dm FlyBase G44294.2 ACGGAATTAAGGAAACATTAAACTATATAATAGTGCTAAGCCGCGCCTAACCTCTCGAGATATATATAGTTAGGATGAGAGATAGGAAGAGTGTAGAAATTGGCTGCAAAGTTTGTGATTGGAGTTAAGAGAGGAGAGACCCAGAGAGAGATATATACACCCACGACCCAAGACCCAAGAAAACTCAAACTTTTGTGAGCTGTTTAACTGTCGATTTTTTGCTAATAAGTTATAGCCTTCCGGCGATATGTTATATATATATATATGTTAT 1147 3387033 0.992090859 53 1040 11654 0.912543153 1.768939419 0.284810127 0.380122058 0.590909091 1147 126 26 1586 X:3386817-3387087 6 822.5 5966 FBgn0262656 5210.653333 68.99333333 106.66 0.157849687 11.92144169 7.711419464 -19 -19 -19 0.01 dme-miR-1003-3p 7mer-m8 ATGTGAG X 3387449 3387455 + X_3387449_3387455_+ 0.671796206 0.671796206 0.671796206 0 dm FBtr0331605 3385311 3391697 X + 3387435 3387508 3'utr dm FlyBase G58559.2 GAAAATTTTTTTCTATGTGAGTTCTAGGCTAATGCTGCCTACTAAACCTATACCCAGATATACATATAATTCTT 34 3387456 0.837033768 9 30 262 0.857142857 1.62324929 0.224489796 0.352941176 0.551020408 34 7 0 42 X:3387435-3387508 7 dm FBtr0331605 3385311 3391697 ATGTGAG 7mer-m8 dme-miR-1003-3p X + 3387390 3387505 3'utr dm FlyBase G44297.1 TAAAGCAAGAAAATTTCTATAGTGTAGGGCGCGAGACGTTTCAACGAAAATTTTTTTCTATGTGAGTTCTAGGCTAATGCTGCCTACTAAACCTATACCCAGATATACATATAATT 22 3387458 0.980335919 12 21 166 0.962962963 1.414973348 0.222222222 0.227272727 0.37037037 22 1 0 26 X:3387390-3387505 7 15.5 5967 FBgn0262656 5210.653333 68.99333333 106.66 0.002974675 0.224659387 0.145321583 -7 -9 -8 0.01 dme-miR-1006-3p 6mer3-8 CGAATT X 3387910 3387915 + X_3387910_3387915_+ 0.507200501 0.507200501 0.507200501 0 dm FBtr0331605 3385311 3391697 X + 3387872 3387936 3'utr dm FlyBase G58562.1 AAAAACCCGGAGAGAAAACACAAAGCAATAGACTTAAGCGAATTGTACAACGCGAAACGAAAACA 207 3387900 0.96684728 6 202 479 0.983870968 2.086359831 0.294354839 0.173913043 0.310483871 207 3 1 244 X:3387872-3387936 6 dm FBtr0331605 3385311 3391697 CGAATT 6mer3-8 dme-miR-1006-3p X + 3387870 3387933 3'utr dm FlyBase G44300.1 AAAAAAACCCGGAGAGAAAACACAAAGCAATAGACTTAAGCGAATTGTACAACGCGAAACGAAA 160 3387900 0.96779218 5 156 359 0.974025974 2.352182518 0.372294372 0.3375 0.541125541 160 6 0 225 X:3387870-3387933 6 167.5 5968 FBgn0262656 5210.653333 68.99333333 106.66 0.032145681 2.427770799 1.570410651 10 10 10 0.01 dme-miR-968-5p 6mer3-8 ACTACT X 3388418 3388423 + X_3388418_3388423_+ 0.999999999 0.999999999 0.999999999 0 dm FBtr0331605 3385311 3391697 X + 3388402 3388450 3'utr dm FlyBase G58567.1 ATATACACACACACAAACTACTATTTGAATTAGTTGTTAAAAAATTTAT 7 3388424 0.987064162 5 7 57 1 0.954242509 0.222222222 0.285714286 0.444444444 7 0 0 9 X:3388402-3388450 6 dm FBtr0331605 3385311 3391697 ACTACT 6mer3-8 dme-miR-968-5p X + 3388362 3388442 3'utr dm FlyBase G44302.1 AGTTTAAATATATTTTTATGATTATCAAATTTTTTATATTATATACACACACACAAACTACTATTTGAATTAGTTGTTAAA 13 3388426 0.976669359 7 12 140 0.9375 1.176091259 0.1875 0.230769231 0.375 13 1 0 15 X:3388362-3388442 6 5.5 5969 FBgn0262656 5210.653333 68.99333333 106.66 0.00105553 0.079717847 0.051565723 -6 -8 -7 0.01 dme-miR-980-5p 6mer2-7 AAAAAC X 3388646 3388651 + X_3388646_3388651_+ 0.999999999 0.999999999 0.999999999 0 dm FBtr0331605 3385311 3391697 X + 3388626 3388749 3'utr dm FlyBase G58569.1 TTTAGTCATAAACGTATGCAAAAAACGTATACGTTTATGGCTATGCATTTGAAATCCCTATTTTTGATTTGATGACAAAAGAAGATATGAAAATTCTGTTTACTTTGGTTATTGCTTATTAAAT 49 3388634 0.885048608 13 46 387 0.933333333 1.748188027 0.15 0.204081633 0.35 49 4 0 56 X:3388626-3388749 6 dm FBtr0331605 3385311 3391697 AAAAAC 6mer2-7 dme-miR-980-5p X + 3388626 3388659 3'utr dm FlyBase G44305.1 TTTAGTCATAAACGTATGCAAAAAACGTATACGT 14 3388634 0.795767292 3 13 84 0.941176471 1.204119983 0.058823529 0.214285714 0.352941176 14 1 0 16 X:3388626-3388659 6 20.5 5970 FBgn0262656 5210.653333 68.99333333 106.66 0.003934248 0.297130158 0.192199512 12 12 12 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 3388918 3388923 + X_3388918_3388923_+ 0.999999999 0.999999999 0.999999999 0 dm FBtr0331605 3385311 3391697 X + 3388891 3388962 3'utr dm FlyBase G58571.1 AAGTAAACACAATAAATTACATTTTATGTACCTTCTACATATATAAACTAAATATATTACACAGAACACACA 135 3388917 0.979817993 9 127 1467 0.945205479 2.139879086 0 0.074074074 0.143835616 135 8 0 138 X:3388891-3388962 6 dm FBtr0331605 3385311 3391697 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X + 3388885 3388948 3'utr dm FlyBase G44308.1 TGAGAAAAGTAAACACAATAAATTACATTTTATGTACCTTCTACATATATAAACTAAATATATT 83 3388917 0.992824373 11 76 891 0.923664122 1.480725379 0.022900763 0.481927711 0.671755725 83 7 3 121 X:3388885-3388948 6 105.5 5971 FBgn0262656 5210.653333 68.99333333 106.66 0.020246981 1.52913325 0.98912432 1 1 1 0.01 dme-miR-1012-3p 8mer-A1 TTGACTAA X 3489219 3489226 + X_3489219_3489226_+ 0.500086396 0.484528551 0.492307473 0.011001026 CG10803 FBtr0331612|FBtr0332285 3488215|3488215 3490915|3490915 X + 3489201 3489240 3'utr CG10803 FlyBase G58590.1 CGAGCAAACGCTACCAATTTGACTAAAATTAGTTAAGTGA 15 3489219 0.814163105 2 13 103 0.866666667 1.113943352 0.266666667 0 0 15 2 0 13 X:3489201-3489240 8 CG10803 FBtr0332285|FBtr0331612 3488215|3488215 3490915|3490915 TTGACTAA 8mer-A1 dme-miR-1012-3p X + 3489206 3489253 3'utr CG10803 FlyBase G44325.1 AAACGCTACCAATTTGACTAAAATTAGTTAAGTGAAATTATACTCAAA 13 3489219 0.984350701 4 11 82 0.9 0.954242509 0.15 0.384615385 0.6 13 1 1 18 X:3489206-3489253 8 12.5 5972 FBgn0029666 905.38 23.07666667 35.43666667 0.013806358 0.541672685 0.352741981 0 0 0 0.01 dme-miR-980-3p 8mer-A1 GGCAGCTA X 3489594 3489601 + X_3489594_3489601_+ 0.668734347 0.668734347 0.668734347 0 CG10803 FBtr0331612|FBtr0332285 3488215|3488215 3490915|3490915 X + 3489527 3489645 3'utr CG10803 FlyBase G58592.1 AACTACAAACTACTAAATACTGAATACTGAATACAAAAACAGATAAGCCGGAAAATGAGCCGCAACAGGCAGCTATAAGTTATTTTATATATTTTGTAAACTCGAAATCATTAGGAGTG 28 3489582 0.956221833 10 26 125 0.903225806 1.447158031 0.258064516 0.107142857 0.193548387 28 3 0 28 X:3489527-3489645 8 CG10803 FBtr0332285|FBtr0331612 3488215|3488215 3490915|3490915 GGCAGCTA 8mer-A1 dme-miR-980-3p X + 3489575 3489616 3'utr CG10803 FlyBase G44327.1 CGGAAAATGAGCCGCAACAGGCAGCTATAAGTTATTTTATAT 8 3489602 0.842063711 3 7 19 0.888888889 0.903089987 0.666666667 0.125 0.222222222 8 1 0 8 X:3489575-3489616 8 15.5 5973 FBgn0029666 905.38 23.07666667 35.43666667 0.017119883 0.67167413 0.437400056 12 -8 2 0.01 dme-bantam-3p 7mer-m8 TGATCTC X 3508783 3508789 - X_3508783_3508789_- 0.661615243 0.661615243 0.661615243 0 CG32791 FBtr0333795 3507243 3513002 X - 3508763 3508805 3'utr CG32791 FlyBase G64593.1 TTTTTAATTAATTCATTGATCTCTTCTCACAAGGTTGGTTCTC 34 3508789 0.679050608 5 33 321 0.976190476 1.612783857 0 0.205882353 0.357142857 34 1 0 41 X:3508763-3508805 7 CG32791 FBtr0333795 3507243 3513002 TGATCTC 7mer-m8 dme-bantam-3p X - 3508763 3508805 3'utr CG32791 FlyBase G48671.1 TTTTTAATTAATTCATTGATCTCTTCTCACAAGGTTGGTTCTC 15 3508789 0.645855555 5 15 142 1 1.397940009 0 0.466666667 0.68 15 0 0 25 X:3508763-3508805 7 24.5 5974 FBgn0052791 287.9933333 6.18 9.406666667 0.085071414 3.964401294 2.60453579 0 0 0 0.01 dme-miR-276a-3p 6mer3-8 AGTTCC X 3701056 3701061 + X_3701056_3701061_+ 1 1 1 0 Mnt FBtr0307278|FBtr0301823|FBtr0343578|FBtr0307277|FBtr0301822 3700740|3700740|3700740|3700740|3700740 3701672|3701672|3701672|3701672|3701672 X + 3701032 3701082 3'utr Mnt FlyBase G58608.1 AGATAAAAACAAAAGCTATCAAACAGTTCCGCCCAACACTTAGCATCGATT 334 3701058 0.8111104 5 332 1151 0.989821883 2.288919606 0.022900763 0.161676647 0.287531807 334 3 1 389 X:3701032-3701082 6 Mnt FBtr0307277|FBtr0301822|FBtr0301823|FBtr0343578|FBtr0307278 3700740|3700740|3700740|3700740|3700740 3701672|3701672|3701672|3701672|3701672 AGTTCC 6mer3-8 dme-miR-276a-3p X + 3701035 3701083 3'utr Mnt FlyBase G44338.1 TAAAAACAAAAGCTATCAAACAGTTCCGCCCAACACTTAGCATCGATTT 165 3701058 0.782742676 4 164 559 0.984555985 1.707570176 0.015444015 0.424242424 0.633204633 165 0 4 255 X:3701035-3701083 6 248.5 5975 FBgn0023215 795.77 23.85 36.51 0.31227616 10.41928721 6.806354423 -2 -2 -2 0.01 dme-miR-277-3p 6mer3-8 TGCATT X 3705060 3705065 - X_3705060_3705065_- 1 1 1 0 Rala FBtr0070583|FBtr0070584|FBtr0070582 3704982|3704608|3704982 3707374|3707374|3706146 X - 3705037 3705075 3'utr Rala FlyBase G64618.1 TTTGTATAACTGCATTCTGTATTGTAATATTTAAGCTAT 10 3705061 0.780215803 5 10 111 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 X:3705037-3705075 6 Rala FBtr0070583|FBtr0070584|FBtr0070582 3704982|3704608|3704982 3707374|3707374|3706146 TGCATT 6mer3-8 dme-miR-277-3p X - 3705005 3705083 3'utr Rala FlyBase G48689.1 TGTTTACTTTTGTATAACTGCATTCTGTATTGTAATATTTAAGCTATTATTATTATGATAATTATTATTATTATTAAAT 13 3705060 0.99074505 7 13 144 1 1.361727836 0 0.461538462 0.695652174 13 0 0 23 X:3705005-3705083 6 10 5976 FBgn0015286 835.0366667 45.75666667 69.86666667 0.011975522 0.218547388 0.143129771 -4 -5 -4.5 0.01 dme-miR-965-3p 7mer-A1 ACGCTTA X 3705658 3705664 - X_3705658_3705664_- 0.823349562 0.823349562 0.823349562 0 Rala FBtr0070583|FBtr0070584|FBtr0070582 3704982|3704608|3704982 3707374|3707374|3706146 X - 3705639 3705683 3'utr Rala FlyBase G64620.1 AAACCTAAAGCTGAAGCTAACGCTTAAACATATTAAATATAATCA 6 3705666 0.940817106 2 6 31 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 X:3705639-3705683 7 Rala FBtr0070583|FBtr0070584|FBtr0070582 3704982|3704608|3704982 3707374|3707374|3706146 ACGCTTA 7mer-A1 dme-miR-965-3p X - 3705625 3705678 3'utr Rala FlyBase G48690.1 TAAAGCTGAAGCTAACGCTTAAACATATTAAATATAATCATCAATCGTAGACAA 5 3705666 0.938185392 3 5 22 1 0.77815125 0 0.2 0.333333333 5 0 0 6 X:3705625-3705678 7 5 5977 FBgn0015286 835.0366667 45.75666667 69.86666667 0.005987761 0.109273694 0.071564885 2 2 2 0.01 dme-bantam-3p 6mer3-8 TGATCT X 3706238 3706243 - X_3706238_3706243_- 1 1 1 0 Rala FBtr0070583|FBtr0070584 3704982|3704608 3707374|3707374 X - 3706216 3706253 intron-3'utr Rala FlyBase G64622.1 AGGTATTTTATGATCTAATCAGGGATATTTCATCGCGT 8 3706243 0.747518503 2 8 84 1 0.903089987 0.375 0 0 8 0 0 8 X:3706216-3706253 6 Rala FBtr0070583|FBtr0070584 3704982|3704608 3707374|3707374 TGATCT 6mer3-8 dme-bantam-3p X - 3706224 3706252 intron-3'utr Rala FlyBase G48692.1 GGTATTTTATGATCTAATCAGGGATATTT 5 3706244 0.963311441 3 5 40 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 X:3706224-3706252 6 6.5 5978 FBgn0015286 835.0366667 45.75666667 69.86666667 0.007784089 0.142055802 0.093034351 0 1 0.5 0.01 dme-miR-308-3p 7mer-m1 TGTGATT X 3787057 3787063 + X_3787057_3787063_+ 0.521223855 0.521223855 0.521223855 0 tlk FBtr0299581|FBtr0070596|FBtr0333753|FBtr0299582|FBtr0299580|FBtr0299579|FBtr0333751 3786403|3786403|3786403|3786403|3786403|3786403|3786403 3787977|3787977|3789770|3787977|3788818|3787977|3789770 X + 3787030 3787139 3'utr tlk FlyBase G58647.1 AACAAATTATTGCATTATCTGCTGGATTGTGATTGTGGTTCAAACATTAAAAATACACTTACTCATACACACAAGGTAGACACTGCAGACTAATTTTGCCTTAAAAGAAA 58 3787062 0.98275765 15 54 495 0.945945946 1.84509804 0.175675676 0.172413793 0.351351351 58 4 0 70 X:3787030-3787139 7 tlk FBtr0333751|FBtr0299582|FBtr0299580|FBtr0299579|FBtr0070596|FBtr0333753|FBtr0299581 3786403|3786403|3786403|3786403|3786403|3786403|3786403 3789770|3787977|3788818|3787977|3787977|3789770|3787977 TGTGATT 7mer-m1 dme-miR-308-3p X + 3787029 3787077 3'utr tlk FlyBase G44367.1 TAACAAATTATTGCATTATCTGCTGGATTGTGATTGTGGTTCAAACATT 38 3787063 0.80106654 9 35 391 0.915254237 1.431363764 0.203389831 0.421052632 0.627118644 38 4 1 54 X:3787029-3787077 7 37 5979 FBgn0086899 3401.553333 62.96 97.16333333 0.010877383 0.587674714 0.380802086 -5 -6 -5.5 0.01 dme-miR-34-5p 6mer3-8 CACTGC X 3787110 3787115 + X_3787110_3787115_+ 1 1 1 0 tlk FBtr0299581|FBtr0070596|FBtr0333753|FBtr0299582|FBtr0299580|FBtr0299579|FBtr0333751 3786403|3786403|3786403|3786403|3786403|3786403|3786403 3787977|3787977|3789770|3787977|3788818|3787977|3789770 X + 3787030 3787139 3'utr tlk FlyBase G58647.1 AACAAATTATTGCATTATCTGCTGGATTGTGATTGTGGTTCAAACATTAAAAATACACTTACTCATACACACAAGGTAGACACTGCAGACTAATTTTGCCTTAAAAGAAA 58 3787113 0.98275765 15 54 495 0.945945946 1.84509804 0.175675676 0.172413793 0.351351351 58 4 0 70 X:3787030-3787139 6 tlk FBtr0333751|FBtr0299582|FBtr0299580|FBtr0299579|FBtr0070596|FBtr0333753|FBtr0299581 3786403|3786403|3786403|3786403|3786403|3786403|3786403 3789770|3787977|3788818|3787977|3787977|3789770|3787977 CACTGC 6mer3-8 dme-miR-34-5p X + 3787084 3787139 3'utr tlk FlyBase G44368.1 ACACTTACTCATACACACAAGGTAGACACTGCAGACTAATTTTGCCTTAAAAGAAA 15 3787113 0.973749304 7 15 90 1 1.255272505 0.277777778 0.2 0.333333333 15 0 0 18 X:3787084-3787139 6 17.5 5980 FBgn0086899 3401.553333 62.96 97.16333333 0.005144708 0.277954257 0.180109095 -3 -3 -3 0.01 dme-miR-11-3p 7mer-m1 TGTGATG X 3788617 3788623 + X_3788617_3788623_+ 0.535593563 0.535593556 0.53559356 0 tlk FBtr0333753|FBtr0299580|FBtr0333751 3786403|3786403|3786403 3789770|3788818|3789770 X + 3788608 3788651 3'utr tlk FlyBase G58653.1 GTATATCGATGTGATGTCATCGATTGTCGATAACGATTGGATGC 14 3788631 0.978422222 3 12 88 0.947368421 1.255272505 0.578947368 0.285714286 0.473684211 14 1 0 18 X:3788608-3788651 7 tlk FBtr0333751|FBtr0299580|FBtr0333753 3786403|3786403|3786403 3789770|3788818|3789770 TGTGATG 7mer-m1 dme-miR-11-3p X + 3788605 3788657 3'utr tlk FlyBase G44374.1 TGTGTATATCGATGTGATGTCATCGATTGTCGATAACGATTGGATGCGAGTGT 5 3788631 0.978456795 2 5 38 1 1 0.1 0.6 0.8 5 0 0 10 X:3788605-3788657 7 8 5981 FBgn0086899 3401.553333 62.96 97.16333333 0.002351867 0.127064803 0.082335586 -14 -14 -14 0.01 dme-miR-14-3p 8mer-A1 AAGACTGA X 3791691 3791698 + X_3791691_3791698_+ 0.643565469 0.643565469 0.643565469 0 HIP-R FBtr0070597|FBtr0333764|FBtr0070598 3791667|3791667|3791667 3792477|3792477|3792477 X + 3791616 3791710 stop_codon HIP-R FlyBase G58657.1 AGCCTAAGCCTAAAAAGGACTCCGCCGACTTCGTCGATGACGGTTTGGACTAAGGTTTAGAAATGGGGCAGTAGTAAGACTGAAACATGCGTCGA 131 3791690 0.774859864 7 111 444 0.854304636 1.508529719 0.046357616 0.13740458 0.251655629 131 19 3 129 X:3791616-3791710 8 HIP-R FBtr0070598|FBtr0333764|FBtr0070597 3791667|3791667|3791667 3792477|3792477|3792477 AAGACTGA 8mer-A1 dme-miR-14-3p X + 3791656 3791725 stop_codon HIP-R FlyBase G44375.1 CGGTTTGGACTAAGGTTTAGAAATGGGGCAGTAGTAAGACTGAAACATGCGTCGATAAAAAGAAGTTAAC 91 3791690 0.929287388 6 81 304 0.905511811 1.759667845 0.023622047 0.274725275 0.480314961 91 11 1 115 X:3791656-3791725 8 104 5982 FBgn0029676 2406.406667 147.0733333 226.7733333 0.043217965 0.70713023 0.458607714 1 1 1 0.01 dme-miR-318-3p 7mer-A1 CCAGTGA X 3792435 3792441 + X_3792435_3792441_+ 0.823349562 0.823349562 0.823349562 0 HIP-R FBtr0070597|FBtr0333764|FBtr0070598 3791667|3791667|3791667 3792477|3792477|3792477 X + 3792424 3792453 3'utr HIP-R FlyBase G58661.1 CACTCATTCAACCAGTGATCAATGGAAATA 11 3792446 0.919570354 3 11 53 1 1.146128036 0.714285714 0.272727273 0.428571429 11 0 0 14 X:3792424-3792453 7 HIP-R FBtr0070598|FBtr0333764|FBtr0070597 3791667|3791667|3791667 3792477|3792477|3792477 CCAGTGA 7mer-A1 dme-miR-318-3p X + 3792425 3792449 3'utr HIP-R FlyBase G44378.1 ACTCATTCAACCAGTGATCAATGGA 6 3792446 0.934188323 2 6 27 1 1.079181246 0.666666667 0.666666667 0.833333333 6 0 0 12 X:3792425-3792449 7 8.5 5983 FBgn0029676 2406.406667 147.0733333 226.7733333 0.003532238 0.057794298 0.037482361 -11 -11 -11 0.01 dme-miR-14-3p 8mer-A1 AAGACTGA X 3800774 3800781 + X_3800774_3800781_+ 0.643565469 0.643565469 0.643565469 0 HIP FBtr0070600 3800750 3801570 X + 3800738 3800796 stop_codon HIP FlyBase G58667.1 ACGGTTTGGACTAAGGTTTAGAAATGGGGCAGTAGTAAGACTGAAACATGCGTCGATAA 135 3800773 0.919593036 4 128 441 0.947976879 2.214843848 0 0.22962963 0.398843931 135 9 0 164 X:3800738-3800796 8 HIP FBtr0070600 3800750 3801570 AAGACTGA 8mer-A1 dme-miR-14-3p X + 3800739 3800793 stop_codon HIP FlyBase G44380.1 CGGTTTGGACTAAGGTTTAGAAATGGGGCAGTAGTAAGACTGAAACATGCGTCGA 83 3800773 0.912816725 5 77 256 0.959016393 1.767155866 0 0.34939759 0.557377049 83 4 1 117 X:3800739-3800793 8 107 5984 FBgn0260484 933.6966667 55.94 86.52333333 0.114598246 1.912763675 1.236660631 1 1 1 0.01 dme-miR-980-5p 8mer-A1 GAAAAACA X 3800893 3800900 + X_3800893_3800900_+ 0.639886926 0.639886926 0.639886926 0 HIP FBtr0070600 3800750 3801570 X + 3800848 3800894 3'utr HIP FlyBase G58668.1 AAGAAAGAGAAAGCAACAGAGTGCGGGGAAGAAGATGGACTACACGA 18 3800883 0.93979546 2 18 29 1 1.301029996 0.4 0.111111111 0.2 18 0 0 20 X:3800848-3800894 2 HIP FBtr0070600 3800750 3801570 GAAAAACA 8mer-A1 dme-miR-980-5p X + 3800851 3800901 3'utr HIP FlyBase G44381.1 AAAGAGAAAGCAACAGAGTGCGGGGAAGAAGATGGACTACACGAAAAACAA 20 3800883 0.900656389 2 20 29 1 1.380211242 0.291666667 0.15 0.291666667 20 0 0 24 X:3800851-3800901 8 7 5985 FBgn0260484 933.6966667 55.94 86.52333333 0.007497081 0.125134072 0.080903032 10 10 10 0.01 dme-miR-318-3p 7mer-A1 CCAGTGA X 3801528 3801534 + X_3801528_3801534_+ 0.823349562 0.823349562 0.823349562 0 HIP FBtr0070600 3800750 3801570 X + 3801468 3801547 3'utr HIP FlyBase G58671.1 GAAAGCAATCGCCCATTCATTCACACACTCATTCACACACTCATTCACACACTCATTCAACCAGTGATCAATGGAAATAA 11 3801539 0.955657577 7 11 52 1 1.146128036 0.285714286 0.181818182 0.357142857 11 0 0 14 X:3801468-3801547 7 HIP FBtr0070600 3800750 3801570 CCAGTGA 7mer-A1 dme-miR-318-3p X + 3801521 3801542 3'utr HIP FlyBase G44383.1 CATTCAACCAGTGATCAATGGA 9 3801539 0.898780532 3 9 35 1 1.079181246 0.5 0.333333333 0.5 9 0 0 12 X:3801521-3801542 7 8.5 5986 FBgn0260484 933.6966667 55.94 86.52333333 0.009103599 0.151948516 0.098239396 -11 -11 -11 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA X 3856620 3856625 + X_3856620_3856625_+ 1 1 1 0 ec FBtr0112801|FBtr0070606|FBtr0112802 3856584|3856584|3856584 3857621|3857621|3857621 X + 3856544 3856789 stop_codon ec FlyBase G58686.1 AACTGCGAGTACTACCTGCAGATGCTGAACCAGCGCAGATGATGATGATTCGACACTCGACCATCGACCATCTCTAGTGCAACTTTCTAGCCGTACATGGAACCCGTTAATCTCAAGCATTAAAATGCTGCCACGTCGCCAATAAGGAGCCGCCAAGGATGTACATAGCATGCTTACAAATACATAGATAGGTGTAAGGATATAAAGTGGTGCCAGCTAACAGGCGAATTGCATGGACCCGGACTC 191 3856628 0.970774783 25 181 1041 0.938016529 1.878904602 0.123966942 0.204188482 0.371900826 191 13 2 227 X:3856544-3856789 6 ec FBtr0112802|FBtr0112801|FBtr0070606 3856584|3856584|3856584 3857621|3857621|3857621 GTGCAA 6mer3-8 dme-miR-92b-3p X + 3856594 3856715 3'utr ec FlyBase G44391.1 CGACACTCGACCATCGACCATCTCTAGTGCAACTTTCTAGCCGTACATGGAACCCGTTAATCTCAAGCATTAAAATGCTGCCACGTCGCCAATAAGGAGCCGCCAAGGATGTACATAGCATG 133 3856628 0.932940516 14 124 696 0.935960591 1.801632346 0.108374384 0.406015038 0.610837438 133 11 2 190 X:3856594-3856715 6 81 5987 FBgn0000542 46.02 0.82 1.256666667 1.760104302 98.7804878 64.45623342 -8 -8 -8 0.01 dme-miR-1006-3p 7mer-m8 CGAATTT X 3857189 3857195 + X_3857189_3857195_+ 0.661614704 0.661614704 0.661614704 0 ec FBtr0112801|FBtr0070606|FBtr0112802 3856584|3856584|3856584 3857621|3857621|3857621 X + 3857128 3857322 3'utr ec FlyBase G58688.1 ACCCAAAGCCTGACCAGTCGTCCGCCTCCATAAACCACATTAGTGCTTTTTGTTTCGACATCGAATTTTATTTACATTTTTTTACCTAAGCTAACTAAATACGATTTATTTCTCTGTGTGAGACGCCAGCAGTTTGAAACTTGGTCGTTGAGCTTCCTTGTGCGTGCTGTTGTCCAACGACACTCGCACTTCCAT 55 3857175 0.986226984 26 54 447 0.984126984 1.792391689 0.206349206 0.109090909 0.222222222 55 1 0 62 X:3857128-3857322 7 ec FBtr0112802|FBtr0112801|FBtr0070606 3856584|3856584|3856584 3857621|3857621|3857621 CGAATTT 7mer-m8 dme-miR-1006-3p X + 3857134 3857190 3'utr ec FlyBase G44393.1 AGCCTGACCAGTCGTCCGCCTCCATAAACCACATTAGTGCTTTTTGTTTCGACATCG 14 3857177 0.856712767 6 14 86 1 1.380211242 0.25 0.5 0.708333333 14 0 0 24 X:3857134-3857190 2 3.5 5988 FBgn0000542 46.02 0.82 1.256666667 0.07605389 4.268292683 2.785145889 14 12 13 0.01 dme-miR-1003-3p 7mer-A1 TGTGAGA X 3857244 3857250 + X_3857244_3857250_+ 0.823342609 0.823349562 0.823346086 4.95E-06 ec FBtr0112801|FBtr0070606|FBtr0112802 3856584|3856584|3856584 3857621|3857621|3857621 X + 3857128 3857322 3'utr ec FlyBase G58688.1 ACCCAAAGCCTGACCAGTCGTCCGCCTCCATAAACCACATTAGTGCTTTTTGTTTCGACATCGAATTTTATTTACATTTTTTTACCTAAGCTAACTAAATACGATTTATTTCTCTGTGTGAGACGCCAGCAGTTTGAAACTTGGTCGTTGAGCTTCCTTGTGCGTGCTGTTGTCCAACGACACTCGCACTTCCAT 55 3857244 0.986226984 26 54 447 0.984126984 1.792391689 0.206349206 0.109090909 0.222222222 55 1 0 62 X:3857128-3857322 7 ec FBtr0112802|FBtr0112801|FBtr0070606 3856584|3856584|3856584 3857621|3857621|3857621 TGTGAGA 7mer-A1 dme-miR-1003-3p X + 3857203 3857259 3'utr ec FlyBase G44394.1 ATTTTTTTACCTAAGCTAACTAAATACGATTTATTTCTCTGTGTGAGACGCCAGCAG 5 3857245 0.974360556 4 5 37 1 0.77815125 0.666666667 0.2 0.333333333 5 0 0 6 X:3857203-3857259 7 5.5 5989 FBgn0000542 46.02 0.82 1.256666667 0.119513255 6.707317073 4.376657825 0 -1 -0.5 0.01 dme-miR-1007-3p 7mer-m8 TGAGCTT X 3857276 3857282 + X_3857276_3857282_+ 0.620203442 0.620203442 0.620203442 0 ec FBtr0112801|FBtr0070606|FBtr0112802 3856584|3856584|3856584 3857621|3857621|3857621 X + 3857128 3857322 3'utr ec FlyBase G58688.1 ACCCAAAGCCTGACCAGTCGTCCGCCTCCATAAACCACATTAGTGCTTTTTGTTTCGACATCGAATTTTATTTACATTTTTTTACCTAAGCTAACTAAATACGATTTATTTCTCTGTGTGAGACGCCAGCAGTTTGAAACTTGGTCGTTGAGCTTCCTTGTGCGTGCTGTTGTCCAACGACACTCGCACTTCCAT 55 3857276 0.986226984 26 54 447 0.984126984 1.792391689 0.206349206 0.109090909 0.222222222 55 1 0 62 X:3857128-3857322 7 ec FBtr0112802|FBtr0112801|FBtr0070606 3856584|3856584|3856584 3857621|3857621|3857621 TGAGCTT 7mer-m8 dme-miR-1007-3p X + 3857263 3857303 3'utr ec FlyBase G44395.1 GAAACTTGGTCGTTGAGCTTCCTTGTGCGTGCTGTTGTCCA 31 3857285 0.703249831 6 28 295 0.913043478 1.322219295 0.304347826 0.322580645 0.543478261 31 3 1 42 X:3857263-3857303 7 24.5 5990 FBgn0000542 46.02 0.82 1.256666667 0.532377227 29.87804878 19.49602122 0 -9 -4.5 0.01 dme-miR-31a-5p 6mer3-8 TCTTGC X 3857430 3857435 + X_3857430_3857435_+ 0.960944168 0.998539037 0.979741603 0.026583538 ec FBtr0112801|FBtr0070606|FBtr0112802 3856584|3856584|3856584 3857621|3857621|3857621 X + 3857420 3857466 3'utr ec FlyBase G58689.2 ATTTTTTGTGTCTTGCATTTAAACGAATACGTGTATTTTTAGTGTTA 21 3857432 0.986703302 4 20 188 0.96 1.380211242 0.04 0.19047619 0.32 21 1 0 24 X:3857420-3857466 6 ec FBtr0112802|FBtr0112801|FBtr0070606 3856584|3856584|3856584 3857621|3857621|3857621 TCTTGC 6mer3-8 dme-miR-31a-5p X + 3857422 3857473 3'utr ec FlyBase G44397.1 TTTTTGTGTCTTGCATTTAAACGAATACGTGTATTTTTAGTGTTAATATAGC 20 3857432 0.988709331 5 18 172 0.928571429 1.414973348 0.214285714 0.35 0.535714286 20 2 0 26 X:3857422-3857473 6 18 5991 FBgn0000542 46.02 0.82 1.256666667 0.391134289 21.95121951 14.32360743 -2 -2 -2 0.01 dme-miR-307a-3p 6mer2-7 GTTGTG X 3878650 3878655 + X_3878650_3878655_+ 1 1 1 0 CG2930 FBtr0070609|FBtr0340202|FBtr0070610|FBtr0340201 3878616|3878616|3878616|3878616 3878817|3878817|3878817|3878817 X + 3878611 3878671 stop_codon CG2930 FlyBase G58702.1 CGAGTAGACCTCAAACCGATTCGTCCTGCTTGCTCCCGCGTTGTGTATTATATATATATAT 24 3878637 0.714553839 7 22 170 0.961538462 1.096910013 0.269230769 0.083333333 0.153846154 24 0 1 25 X:3878611-3878671 6 CG2930 FBtr0070610|FBtr0340201|FBtr0070609|FBtr0340202 3878616|3878616|3878616|3878616 3878817|3878817|3878817|3878817 GTTGTG 6mer2-7 dme-miR-307a-3p X + 3878616 3878693 stop_codon CG2930 FlyBase G44405.1 AGACCTCAAACCGATTCGTCCTGCTTGCTCCCGCGTTGTGTATTATATATATATATATTTGTACTTGTAGATGTGTAT 13 3878637 0.748939526 7 11 102 0.875 0.669006781 0.0625 0.230769231 0.375 13 0 2 14 X:3878616-3878693 6 7 5992 FBgn0028491 113 4.37 6.676666667 0.061946903 1.601830664 1.048427359 13 13 13 0.01 dme-miR-8-3p 7mer-A1 AGTATTA X 3882633 3882639 + X_3882633_3882639_+ 0.823349562 0.823349562 0.823349562 0 VhaAC39-1 FBtr0070611 3882468 3882967 X + 3882601 3882655 3'utr VhaAC39-1 FlyBase G58712.1 ATGATACCGAGTCTGTATGTTTGTATGTAGCGAGTATTATTGCCGGTCCAGGCAA 12 3882640 0.979120639 6 11 83 1 1.113943352 0.153846154 0.083333333 0.153846154 12 0 0 13 X:3882601-3882655 7 VhaAC39-1 FBtr0070611 3882468 3882967 AGTATTA 7mer-A1 dme-miR-8-3p X + 3882623 3882707 3'utr VhaAC39-1 FlyBase G44416.1 GTATGTAGCGAGTATTATTGCCGGTCCAGGCAAATTTTTGTCAAGTGTTCAGACCCAAGCCTAGATTTCTCAGTTTCCGCGGCTC 10 3882641 0.984412347 6 7 64 0.8 1.079181246 0.2 0.4 0.6 10 3 0 12 X:3882623-3882707 7 7.5 5993 FBgn0028665 905.2066667 61.01 92.86666667 0.008285401 0.122930667 0.080760948 -7 -8 -7.5 0.01 dme-miR-184-5p 6mer3-8 TGATAA X 3882927 3882932 + X_3882927_3882932_+ 0.999951593 1 0.999975797 3.42E-05 VhaAC39-1 FBtr0070611 3882468 3882967 X + 3882901 3882936 3'utr VhaAC39-1 FlyBase G58714.1 ACTTATACAAGAACTACATATGTGAATGATAAATCA 22 3882927 0.774460089 4 22 133 1 1.380211242 0 0.090909091 0.166666667 22 0 0 24 X:3882901-3882936 6 VhaAC39-1 FBtr0070611 3882468 3882967 TGATAA 6mer3-8 dme-miR-184-5p X + 3882894 3882932 3'utr VhaAC39-1 FlyBase G44417.1 AATGCATACTTATACAAGAACTACATATGTGAATGATAA 15 3882927 0.769106522 5 14 93 0.916666667 1.342422681 0 0.4 0.625 15 2 0 22 X:3882894-3882932 6 18.5 5994 FBgn0028665 905.2066667 61.01 92.86666667 0.020437322 0.303228979 0.199210337 0 0 0 0.01 dme-miR-304-5p 6mer3-8 TGAGAT X 3932508 3932513 - X_3932508_3932513_- 1 1 1 0 CG2938 FBtr0332387|FBtr0070627|FBtr0345712 3932154|3932154|3931998 3932955|3932955|3932955 X - 3932483 3932535 3'utr CG2938 FlyBase G64648.1 AAATCGTAGTCAACTCTCGAAATGAGATGTAAAACCTTACTTAATGCAATTTC 5 3932513 0.973831001 4 5 33 1 0.698970004 0 0 0 5 0 0 5 X:3932483-3932535 6 CG2938 FBtr0345712|FBtr0332387|FBtr0070627 3931998|3932154|3932154 3932955|3932955|3932955 TGAGAT 6mer3-8 dme-miR-304-5p X - 3932489 3932565 3'utr CG2938 FlyBase G48714.1 TGAAAAGTGCGTGTCATAGCTATAAGAAGAAAATCGTAGTCAACTCTCGAAATGAGATGTAAAACCTTACTTAATGC 10 3932513 0.953773169 6 10 49 1 1.204119983 0.25 0.4 0.625 10 0 0 16 X:3932489-3932565 6 3.5 5995 FBgn0029685 940.7366667 30.01333333 45.98666667 0.003720489 0.116614838 0.076109017 0 0 0 0.01 dme-miR-968-5p 6mer3-8 ACTACT X 3939846 3939851 + X_3939846_3939851_+ 0.999999957 0.996695922 0.998347939 0.002336352 CG2941 FBtr0070613|FBtr0345711 3939668|3939668 3940006|3940582 X + 3939807 3939860 3'utr CG2941 FlyBase G58719.1 TGTCCTTTAAAAGGATGACTGTATGCACATAACATATGTACTACTGCCTTGCAA 14 3939843 0.978329834 3 14 99 1 1.255272505 0.166666667 0.214285714 0.388888889 14 0 0 18 X:3939807-3939860 6 CG2941 FBtr0070613|FBtr0345711 3939668|3939668 3940006|3940582 ACTACT 6mer3-8 dme-miR-968-5p X + 3939817 3939860 3'utr CG2941 FlyBase G44420.1 AAGGATGACTGTATGCACATAACATATGTACTACTGCCTTGCAA 10 3939843 0.975294405 2 10 66 1 1.079181246 0.083333333 0.2 0.333333333 10 0 0 12 X:3939817-3939860 6 11 5996 FBgn0029686 285.74 9.48 14.62333333 0.038496535 1.160337553 0.752222475 3 3 3 0.01 dme-miR-1012-3p 7mer-A1 TGACTAA X 3953149 3953155 + X_3953149_3953155_+ 0.823349562 0.823349562 0.823349562 0 Vap-33A FBtr0070618|FBtr0342739|FBtr0070617|FBtr0070616 3952921|3952921|3952921|3952921 3955442|3955442|3954086|3954086 X + 3953125 3953206 3'utr Vap-33A FlyBase G58731.1 AAACCACAGAGACGAATGTAAAGCTGACTAAACCGGGGACCGTATACATTTAAACGGTTGTATTGAAAATCAAAAATAATCA 19 3953149 0.930710976 6 18 69 0.95 0.977723605 0.1 0.052631579 0.1 19 0 1 19 X:3953125-3953206 7 Vap-33A FBtr0070616|FBtr0070617|FBtr0342739|FBtr0070618 3952921|3952921|3952921|3952921 3954086|3954086|3955442|3955442 TGACTAA 7mer-A1 dme-miR-1012-3p X + 3953131 3953176 3'utr Vap-33A FlyBase G44430.1 CAGAGACGAATGTAAAGCTGACTAAACCGGGGACCGTATACATTTA 9 3953149 0.941309821 4 6 24 0.8125 1.113943352 0.25 0.625 0.8125 8 3 0 13 X:3953131-3953176 7 12 5997 FBgn0029687 3606.676667 166.3933333 255.1133333 0.003327163 0.072118274 0.047037918 0 0 0 0.01 dme-miR-13b-2-5p 7mer-m1 TTGACGC X 3953372 3953378 + X_3953372_3953378_+ 0.829692045 0.829688666 0.829690356 2.33E-06 Vap-33A FBtr0070618|FBtr0342739|FBtr0070617|FBtr0070616 3952921|3952921|3952921|3952921 3955442|3955442|3954086|3954086 X + 3953362 3953393 3'utr Vap-33A FlyBase G58732.1 TTAAGCTGTATTGACGCTTCGTGTATTTCAAC 6 3953372 0.865413597 5 6 40 1 0.77815125 0.666666667 0 0 6 0 0 6 X:3953362-3953393 7 Vap-33A FBtr0070616|FBtr0070617|FBtr0342739|FBtr0070618 3952921|3952921|3952921|3952921 3954086|3954086|3955442|3955442 TTGACGC 7mer-m1 dme-miR-13b-2-5p X + 3953361 3953394 3'utr Vap-33A FlyBase G44431.1 TTTAAGCTGTATTGACGCTTCGTGTATTTCAACC 7 3953372 0.730922732 3 7 53 1 1.079181246 0.5 0.428571429 0.666666667 7 0 0 12 X:3953361-3953394 7 6 5998 FBgn0029687 3606.676667 166.3933333 255.1133333 0.001663581 0.036059137 0.023518959 0 0 0 0.01 dme-miR-277-3p 7mer-m8 TGCATTT X 3953705 3953711 + X_3953705_3953711_+ 0.620204266 0.620204266 0.620204266 0 Vap-33A FBtr0070618|FBtr0342739|FBtr0070617|FBtr0070616 3952921|3952921|3952921|3952921 3955442|3955442|3954086|3954086 X + 3953689 3953727 3'utr Vap-33A FlyBase G58734.1 TGCTCAGATTTTCGATTGCATTTTTTCGCTATTATTAAT 11 3953704 0.812998988 2 11 138 1 1.113943352 0.153846154 0.181818182 0.307692308 11 0 0 13 X:3953689-3953727 7 Vap-33A FBtr0070616|FBtr0070617|FBtr0342739|FBtr0070618 3952921|3952921|3952921|3952921 3954086|3954086|3955442|3955442 TGCATTT 7mer-m8 dme-miR-277-3p X + 3953689 3953730 3'utr Vap-33A FlyBase G44433.1 TGCTCAGATTTTCGATTGCATTTTTTCGCTATTATTAATTTG 8 3953704 0.763923886 4 8 92 1 0.954242509 0.444444444 0.125 0.222222222 8 0 0 9 X:3953689-3953730 7 9 5999 FBgn0029687 3606.676667 166.3933333 255.1133333 0.002495372 0.054088705 0.035278438 1 1 1 0.01 dme-miR-277-3p 8mer-A1 TGCATTTA X 3954292 3954299 + X_3954292_3954299_+ 0.625364269 0.625364269 0.625364269 0 Vap-33A FBtr0070618|FBtr0342739 3952921|3952921 3955442|3955442 X + 3954231 3954312 3'utr Vap-33A FlyBase G58735.1 CGCGGACGGCGGCTCTATATATACATATTTATATATAATCATTATTGTTTTGGTTGGCATTTGCATTTACTAAGTTTCGTTT 28 3954291 0.987945231 6 28 331 1 1.531478917 0.117647059 0.214285714 0.352941176 28 0 0 34 X:3954231-3954312 8 Vap-33A FBtr0342739|FBtr0070618 3952921|3952921 3955442|3955442 TGCATTTA 8mer-A1 dme-miR-277-3p X + 3954274 3954311 3'utr Vap-33A FlyBase G44434.1 ATTGTTTTGGTTGGCATTTGCATTTACTAAGTTTCGTT 10 3954291 0.7814271 3 10 113 1 1.113943352 0 0.3 0.461538462 10 0 0 13 X:3954274-3954311 8 17 6000 FBgn0029687 3606.676667 166.3933333 255.1133333 0.00471348 0.102167555 0.06663705 1 1 1 0.01 dme-miR-252-5p 6mer3-8 GTACTT X 3955039 3955044 + X_3955039_3955044_+ 1 1 1 0 Vap-33A FBtr0070618|FBtr0342739 3952921|3952921 3955442|3955442 X + 3955029 3955061 3'utr Vap-33A FlyBase G58738.1 TAAGCAAATTGTACTTGATGTCAGCTGTAGCAA 5 3955038 0.782655238 2 5 33 1 0.84509804 0 0.4 0.571428571 5 0 0 7 X:3955029-3955061 6 Vap-33A FBtr0342739|FBtr0070618 3952921|3952921 3955442|3955442 GTACTT 6mer3-8 dme-miR-252-5p X + 3955030 3955056 3'utr Vap-33A FlyBase G44435.1 AAGCAAATTGTACTTGATGTCAGCTGT 7 3955039 0.676958841 3 7 47 1 1.041392685 0.545454545 0.428571429 0.636363636 7 0 0 11 X:3955030-3955056 6 5.5 6001 FBgn0029687 3606.676667 166.3933333 255.1133333 0.00152495 0.033054209 0.021559046 1 0 0.5 0.01 dme-miR-986-5p 6mer2-7 TTCGAG X 3955674 3955679 - X_3955674_3955679_- 1 1 1 0 lva FBtr0342740|FBtr0070626 3955541|3955541 3955874|3955874 X - 3955650 3955784 3'utr lva FlyBase G64659.1 TCGATCCTGGCCTTCCTTGTGCGGACAATGGCAATAGCATTAGAGTTCTTTATACGATATTATGTACCTTGGCTAGCTAAAAAAAAAAGCTCATCCCCTTGGCCGTTCGAGCCGTATTCCCGATTTGTTCCAAAC 149 3955685 0.830515181 20 147 1000 0.988950276 2.252853031 0.270718232 0.174496644 0.320441989 149 2 0 179 X:3955650-3955784 6 lva FBtr0342740|FBtr0070626 3955541|3955541 3955874|3955874 TTCGAG 6mer2-7 dme-miR-986-5p X - 3955662 3955731 3'utr lva FlyBase G48722.2 ACGATATTATGTACCTTGGCTAGCTAAAAAAAAAAGCTCATCCCCTTGGCCGTTCGAGCCGTATTCCCGA 70 3955685 0.828077528 6 66 456 0.952830189 2.004321374 0.29245283 0.4 0.603773585 70 5 0 101 X:3955662-3955731 6 52 6002 FBgn0029688 1838.776667 23.96333333 36.82333333 0.028279671 2.169981917 1.412148095 6 6 6 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 3955716 3955721 - X_3955716_3955721_- 1 1 1 0 lva FBtr0342740|FBtr0070626 3955541|3955541 3955874|3955874 X - 3955650 3955784 3'utr lva FlyBase G64659.1 TCGATCCTGGCCTTCCTTGTGCGGACAATGGCAATAGCATTAGAGTTCTTTATACGATATTATGTACCTTGGCTAGCTAAAAAAAAAAGCTCATCCCCTTGGCCGTTCGAGCCGTATTCCCGATTTGTTCCAAAC 149 3955722 0.830515181 20 147 1000 0.988950276 2.252853031 0.270718232 0.174496644 0.320441989 149 2 0 179 X:3955650-3955784 6 lva FBtr0342740|FBtr0070626 3955541|3955541 3955874|3955874 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X - 3955662 3955731 3'utr lva FlyBase G48722.2 ACGATATTATGTACCTTGGCTAGCTAAAAAAAAAAGCTCATCCCCTTGGCCGTTCGAGCCGTATTCCCGA 70 3955722 0.828077528 6 66 456 0.952830189 2.004321374 0.29245283 0.4 0.603773585 70 5 0 101 X:3955662-3955731 6 50.5 6003 FBgn0029688 1838.776667 23.96333333 36.82333333 0.027463912 2.107386285 1.371413053 1 1 1 0.01 dme-miR-1006-3p 6mer2-7 GAATTT X 4098114 4098119 - X_4098114_4098119_- 0.993511433 0.999999997 0.996755715 0.004588133 CG6379 FBtr0343297|FBtr0070671 4097590|4097916 4098173|4098173 X - 4098104 4098143 3'utr CG6379 FlyBase G64690.1 AACTATACATAAGGATACATATGTGAATTTCCTTTTTTTT 12 4098116 0.782979903 6 10 102 0.846153846 1.041392685 0 0.083333333 0.153846154 12 2 0 11 X:4098104-4098143 6 CG6379 FBtr0343297|FBtr0070671 4097590|4097916 4098173|4098173 GAATTT 6mer2-7 dme-miR-1006-3p X - 4098110 4098137 3'utr CG6379 FlyBase G48744.1 ACATAAGGATACATATGTGAATTTCCTT 6 4098115 0.783096857 3 6 43 1 1 0.3 0.333333333 0.6 6 0 0 10 X:4098110-4098137 6 9 6004 FBgn0029693 315.06 11.47 17.60333333 0.028565987 0.784655623 0.511266806 -3 -4 -3.5 0.01 dme-bantam-3p 8mer-A1 TGATCTCA X 4115169 4115176 - X_4115169_4115176_- 0.631136385 0.631136385 0.631136385 0 Tip60 FBtr0333185 4114798 4115309 X - 4115113 4115189 5'utr Tip60 FlyBase G64713.1 AAAAAAGAGGACGTGATCTCAACGCTGCAGAACCTGAACCTGATCAACTACTACAAGGGCCAGTACATCGTGTGCAT 41 4115176 0.92780075 9 38 137 0.9375 1.352182518 0.166666667 0.146341463 0.270833333 41 2 1 45 X:4115113-4115189 8 Tip60 FBtr0333185 4114798 4115309 TGATCTCA 8mer-A1 dme-bantam-3p X - 4115128 4115189 5'utr Tip60 FlyBase G48758.1 AAAAAAGAGGACGTGATCTCAACGCTGCAGAACCTGAACCTGATCAACTACTACAAGGGCCA 16 4115176 0.952559721 3 15 50 0.964285714 1.431363764 0.178571429 0.5625 0.75 16 1 0 27 X:4115128-4115189 8 17 6005 FBgn0026080 257.65 13.78333333 21.11666667 0.065980982 1.23337364 0.805051302 0 0 0 0.01 dme-miR-965-3p 7mer-m8 TACGCTT X 4126243 4126249 + X_4126243_4126249_+ 0.620204855 0.620204855 0.620204855 0 tyf FBtr0301124|FBtr0345713|FBtr0305179|FBtr0305180|FBtr0070643|FBtr0305184|FBtr0305183|FBtr0305185 4125993|4125993|4125993|4125993|4125993|4125993|4125993|4125993 4128947|4130016|4128947|4128947|4126742|4128947|4128947|4126742 X + 4126230 4126297 3'utr tyf FlyBase G58758.1 ATTGCAATAATGATACGCTTTAATGCTAATTAATGTAACGAGTCGATAGCCGAACTATTGATTAACTT 11 4126243 0.853841916 5 11 76 1 1.146128036 0 0.272727273 0.428571429 11 0 0 14 X:4126230-4126297 7 tyf FBtr0305183|FBtr0305185|FBtr0070643|FBtr0305184|FBtr0305179|FBtr0305180|FBtr0301124|FBtr0345713 4125993|4125993|4125993|4125993|4125993|4125993|4125993|4125993 4128947|4126742|4126742|4128947|4128947|4128947|4128947|4130016 TACGCTT 7mer-m8 dme-miR-965-3p X + 4126190 4126293 3'utr tyf FlyBase G44450.1 TGTTTATATATCTACCGATATCGTACACACACTATATATTATTGCAATAATGATACGCTTTAATGCTAATTAATGTAACGAGTCGATAGCCGAACTATTGATTA 12 4126244 0.981882681 10 12 83 1 1.255272505 0.111111111 0.416666667 0.611111111 12 0 0 18 X:4126190-4126293 7 5 6006 FBgn0026083 3003.736667 42.11 64.35333333 0.001664593 0.118736642 0.077696053 0 -1 -0.5 0.01 dme-miR-317-3p 6mer3-8 TGTGTT X 4126872 4126877 + X_4126872_4126877_+ 0.997474321 0.99998294 0.99872863 0.001773848 tyf FBtr0301124|FBtr0345713|FBtr0305179|FBtr0305180|FBtr0305184|FBtr0305183 4125993|4125993|4125993|4125993|4125993|4125993 4128947|4130016|4128947|4128947|4128947|4128947 X + 4126771 4126883 3'utr tyf FlyBase G58762.1 TTTGGGCGCGTTGTTTGGAGGAAATCCTAATCCTAGATATTAAACCGAGTCAACGTCGCGTGTACATAGTGGACCAGAAGTCGTGTGGGCAGTTCGATCTCTGTGTTATGGAT 37 4126872 0.978892241 10 37 255 1 1.633468456 0.511627907 0.135135135 0.255813953 37 0 0 43 X:4126771-4126883 6 tyf FBtr0305183|FBtr0305184|FBtr0305179|FBtr0305180|FBtr0301124|FBtr0345713 4125993|4125993|4125993|4125993|4125993|4125993 4128947|4128947|4128947|4128947|4128947|4130016 TGTGTT 6mer3-8 dme-miR-317-3p X + 4126838 4126884 3'utr tyf FlyBase G44452.1 AGTGGACCAGAAGTCGTGTGGGCAGTTCGATCTCTGTGTTATGGATT 21 4126872 0.723513697 4 21 177 1 1.531478917 0.676470588 0.380952381 0.617647059 21 0 0 34 X:4126838-4126884 6 23.5 6007 FBgn0026083 3003.736667 42.11 64.35333333 0.007823589 0.558062218 0.365171449 0 0 0 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC X 4132323 4132329 + X_4132323_4132329_+ 0.534710099 0.519379207 0.527044653 0.010840583 GlcAT-I FBtr0070644 4132268 4132833 X + 4132240 4132359 stop_codon GlcAT-I FlyBase G58771.1 CAGCGATCCGATGGCGGCATGGAGGTCTAACCCGGGACCTAATTGTATATATAGCAAACTATCATCCTAGTGAATTTACTTAATGTGTTCCGTCTCCTCATAGTTTAGCCCCAATTTATT 99 4132327 0.990482047 16 89 903 0.903508772 2.012837225 0.043859649 0.121212121 0.236842105 99 11 0 103 X:4132240-4132359 7 GlcAT-I FBtr0070644 4132268 4132833 TGTGTTC 7mer-m8 dme-miR-317-3p X + 4132283 4132354 3'utr GlcAT-I FlyBase G44458.1 TGTATATATAGCAAACTATCATCCTAGTGAATTTACTTAATGTGTTCCGTCTCCTCATAGTTTAGCCCCAAT 61 4132327 0.989215843 10 56 543 0.927710843 1.886490725 0.024096386 0.278688525 0.469879518 61 6 0 77 X:4132283-4132354 7 66.5 6008 FBgn0066114 187.3333333 14.82333333 22.83333333 0.354982206 4.486170452 2.912408759 -4 -4 -4 0.01 dme-miR-305-3p 6mer2-7 TGTGCC X 4132786 4132791 + X_4132786_4132791_+ 1 1 1 0 GlcAT-I FBtr0070644 4132268 4132833 X + 4132747 4132800 3'utr GlcAT-I FlyBase G58774.1 TGGAGATTAGTTACATTAGATATACATAAGCTTCCCCTGTGTGCCTCCCAATTG 16 4132786 0.777590729 6 16 112 1 1.301029996 0.25 0.25 0.4 16 0 0 20 X:4132747-4132800 6 GlcAT-I FBtr0070644 4132268 4132833 TGTGCC 6mer2-7 dme-miR-305-3p X + 4132731 4132808 3'utr GlcAT-I FlyBase G44459.1 AGGTTTTGCAAATTGTTGGAGATTAGTTACATTAGATATACATAAGCTTCCCCTGTGTGCCTCCCAATTGACGCAAAT 16 4132787 0.693920892 8 15 132 0.96 1.380211242 0.12 0.375 0.6 16 1 0 24 X:4132731-4132808 6 11.5 6009 FBgn0066114 187.3333333 14.82333333 22.83333333 0.0613879 0.775803913 0.503649635 0 -1 -0.5 0.01 dme-miR-1012-3p 6mer3-8 TTGACT X 4371034 4371039 + X_4371034_4371039_+ 1 1 1 0 CG3626 FBtr0070652 4370341 4371136 X + 4371017 4371066 3'utr CG3626 FlyBase G58804.1 TTTACTAACCCAGACGATTGACTTTGTAATTTATGGTGTGCTACTGTGTG 23 4371034 0.897441426 4 23 166 1 1.447158031 0.142857143 0.173913043 0.321428571 23 0 0 28 X:4371017-4371066 6 CG3626 FBtr0070652 4370341 4371136 TTGACT 6mer3-8 dme-miR-1012-3p X + 4371017 4371050 3'utr CG3626 FlyBase G44477.1 TTTACTAACCCAGACGATTGACTTTGTAATTTAT 18 4371035 0.751307921 3 17 122 0.95 1.278753601 0.05 0.111111111 0.2 18 1 0 19 X:4371017-4371050 6 20 6010 FBgn0029706 385.3333333 12.31666667 18.87333333 0.051903114 1.623815968 1.05969622 0 -1 -0.5 0.01 dme-miR-33-5p 6mer3-8 CAATGC X 4542128 4542133 + X_4542128_4542133_+ 1 1 1 0 CHOp24 FBtr0070675|FBtr0343566 4542055|4542055 4542438|4542506 X + 4542084 4542158 3'utr CHOp24 FlyBase G58807.1 AGCAAAGGAAGGCGGCACACGAAGCTCTGGGGGAAATGTGTGCGCAATGCGTTGCAGTCTCAGATTTAATTTAAA 42 4542111 0.96209967 9 40 152 1 1.653212514 0.4 0.071428571 0.133333333 42 0 0 45 X:4542084-4542158 6 CHOp24 FBtr0070675|FBtr0343566 4542055|4542055 4542438|4542506 CAATGC 6mer3-8 dme-miR-33-5p X + 4542083 4542150 3'utr CHOp24 FlyBase G44479.1 TAGCAAAGGAAGGCGGCACACGAAGCTCTGGGGGAAATGTGTGCGCAATGCGTTGCAGTCTCAGATTT 31 4542111 0.899814357 7 31 95 1 1.672097858 0.446808511 0.35483871 0.574468085 31 0 0 47 X:4542083-4542150 6 12 6011 FBgn0029709 630.33 70.76 108.4966667 0.019037647 0.169587337 0.110602476 17 17 17 0.01 dme-miR-184-5p 8mer-A1 TGATAAGA X 4542395 4542402 + X_4542395_4542402_+ 0.601217767 0.601217767 0.601217767 0 CHOp24 FBtr0070675|FBtr0343566 4542055|4542055 4542438|4542506 X + 4542344 4542419 3'utr CHOp24 FlyBase G58809.1 CAGACACACATTCAAGGGGGGAAGAGACACTTGTGAACTTTCGAACTAAATTGATAAGAACCATTTGTTTTCTAAT 23 4542374 0.911277231 8 20 124 0.857142857 1.079181246 0.214285714 0.217391304 0.357142857 23 3 1 24 X:4542344-4542419 8 CHOp24 FBtr0070675|FBtr0343566 4542055|4542055 4542438|4542506 TGATAAGA 8mer-A1 dme-miR-184-5p X + 4542344 4542432 3'utr CHOp24 FlyBase G44481.1 CAGACACACATTCAAGGGGGGAAGAGACACTTGTGAACTTTCGAACTAAATTGATAAGAACCATTTGTTTTCTAATAAATGTAGGTTGA 19 4542375 0.9679442 8 17 105 0.892857143 0.920818754 0.214285714 0.473684211 0.642857143 19 1 2 25 X:4542344-4542432 8 6 6012 FBgn0029709 630.33 70.76 108.4966667 0.009518823 0.084793669 0.055301238 21 20 20.5 0.01 dme-miR-263a-5p 7mer-m1 TGCCATT X 4550396 4550402 - X_4550396_4550402_- 0.765586663 0.765586663 0.765586663 0 CG11436 FBtr0070699 4549881 4550409 X - 4550354 4550412 stop_codon CG11436 FlyBase G64742.1 TAGTAATGATTGCCATTACAAACAGATGGACTGGCACATTCCCTTCACAAAGCAACCAA 78 4550374 0.828513022 3 77 349 0.988888889 1.949390007 0.222222222 0.115384615 0.233333333 78 1 0 89 X:4550354-4550412 7 CG11436 FBtr0070699 4549881 4550409 TGCCATT 7mer-m1 dme-miR-263a-5p X - 4550359 4550413 stop_codon CG11436 FlyBase G48779.1 ATAGTAATGATTGCCATTACAAACAGATGGACTGGCACATTCCCTTCACAAAGCA 41 4550386 0.836586786 4 40 205 0.982142857 1.740362689 0.089285714 0.268292683 0.464285714 41 1 0 55 X:4550359-4550413 7 16.5 6013 FBgn0029713 162.73 9.87 15.10666667 0.101394949 1.671732523 1.09223301 -28 -16 -22 0.01 dme-miR-999-3p 6mer3-8 AGTTAA X 4553219 4553224 - X_4553219_4553224_- 1 1 1 0 CG11444 FBtr0070698|FBtr0343567 4553115|4553115 4553334|4553334 X - 4553213 4553246 3'utr CG11444 FlyBase G64747.1 CCTTTTGATGAACAGTGCAATTAGTTAAGCATAA 8 4553225 0.719776927 3 8 52 1 0.954242509 0.333333333 0.125 0.222222222 8 0 0 9 X:4553213-4553246 6 CG11444 FBtr0343567|FBtr0070698 4553115|4553115 4553334|4553334 AGTTAA 6mer3-8 dme-miR-999-3p X - 4553213 4553244 3'utr CG11444 FlyBase G48780.1 TTTTGATGAACAGTGCAATTAGTTAAGCATAA 5 4553225 0.727206407 3 5 36 1 0.903089987 0.25 0.4 0.625 5 0 0 8 X:4553213-4553244 6 6.5 6014 FBgn0029715 690.7566667 79.31666667 121.3466667 0.009409971 0.081949989 0.053565542 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 4638847 4638853 + X_4638847_4638853_+ 0.823349562 0.823349562 0.823349562 0 pon FBtr0070681 4638658 4639112 X + 4638831 4638859 3'utr pon FlyBase G58824.1 AAGTTTTTAATTGCACCCAAAGATTGTCA 5 4638842 0.7899537 3 5 27 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 X:4638831-4638859 7 pon FBtr0070681 4638658 4639112 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X + 4638813 4638861 3'utr pon FlyBase G44489.1 ATTTTTCAGCACCTAGTTAAGTTTTTAATTGCACCCAAAGATTGTCACA 8 4638854 0.985595571 4 5 48 0.5 0.84509804 0.357142857 0.25 0.571428571 8 7 0 7 X:4638813-4638861 7 6 6015 FBgn0025739 591.8333333 27.75666667 42.74666667 0.010137989 0.216164285 0.140361822 5 -7 -1 0.01 dme-miR-305-5p 8mer-A1 AGTACAAA X 4680590 4680597 - X_4680590_4680597_- 0.605654138 0.605654138 0.605654138 0 Pp2C1 FBtr0070685|FBtr0343531 4680402|4679986 4680631|4680631 X - 4680546 4680623 3'utr Pp2C1 FlyBase G64769.1 GTAACGAAACATGCGAGCAACTTGCAAGTACAAATCCTAAGCAACGGAAAATTTTAGATCCTAGTATACTACTTTACT 81 4680601 0.756303164 10 71 386 0.887640449 1.596597096 0.247191011 0.098765432 0.179775281 81 9 1 79 X:4680546-4680623 8 Pp2C1 FBtr0343531 4679986 4680631 AGTACAAA 8mer-A1 dme-miR-305-5p X - 4680539 4680645 stop_codon Pp2C1 FlyBase G48791.1 CGCGAAGGCGCTAGGCTAGATTGTAACGAAACATGCGAGCAACTTGCAAGTACAAATCCTAAGCAACGGAAAATTTTAGATCCTAGTATACTACTTTACTGAAAACG 54 4680601 0.956473552 11 50 241 0.855421687 1.851258349 0.277108434 0.425925926 0.626506024 54 12 0 71 X:4680539-4680645 8 58 6016 FBgn0022768 1391.28 29.69333333 45.54 0.04168823 1.953300404 1.273605621 4 4 4 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA X 4698733 4698738 + X_4698733_4698738_+ 1 1 1 0 ctp FBtr0070707|FBtr0070704|FBtr0070706|FBtr0307065 4698457|4698457|4698457|4698457 4702034|4699456|4699456|4702034 X + 4698695 4698742 3'utr ctp FlyBase G58846.1 ACTACAACCACCAGTAGAACATCTCAAGGATGCGGAAATGATGACCGA 6 4698733 0.914335817 3 6 20 1 0.77815125 0.333333333 0 0 6 0 0 6 X:4698695-4698742 6 ctp FBtr0070706|FBtr0307065|FBtr0070707|FBtr0070704 4698457|4698457|4698457|4698457 4699456|4702034|4702034|4699456 TGATGA 6mer3-8 dme-miR-2a-2-5p X + 4698691 4698742 3'utr ctp FlyBase G44504.1 AAACACTACAACCACCAGTAGAACATCTCAAGGATGCGGAAATGATGACCGA 10 4698725 0.929377927 6 8 31 0.909090909 1 0.272727273 0.1 0.181818182 10 1 0 10 X:4698691-4698742 6 4.5 6017 FBgn0011760 8034.93 648.8766667 999.3333333 0.000560055 0.006935062 0.004503002 0 8 4 0.01 dme-miR-277-3p 6mer3-8 TGCATT X 4699309 4699314 + X_4699309_4699314_+ 1 1 1 0 ctp FBtr0070707|FBtr0070704|FBtr0070706|FBtr0307065 4698457|4698457|4698457|4698457 4702034|4699456|4699456|4702034 X + 4699256 4699359 3'utr ctp FlyBase G58850.2 TTCTGCATGTTGATGGTATAGTTTAGAATAAGCAATTGGTTACCATTTGGATTTGCATTCGCTCCCAATGATTCAAACATCTGTTGAAATATACTTTTAATATT 27 4699326 0.756190988 15 22 216 0.838709677 0.636822098 0.161290323 0.148148148 0.258064516 27 0 5 26 X:4699256-4699359 6 ctp FBtr0070706|FBtr0307065|FBtr0070707|FBtr0070704 4698457|4698457|4698457|4698457 4699456|4702034|4702034|4699456 TGCATT 6mer3-8 dme-miR-277-3p X + 4699291 4699353 3'utr ctp FlyBase G44508.1 TTGGTTACCATTTGGATTTGCATTCGCTCCCAATGATTCAAACATCTGTTGAAATATACTTTT 10 4699311 0.986295681 6 9 78 0.823529412 1.146128036 0.411764706 0.6 0.764705882 10 3 0 14 X:4699291-4699353 6 6.5 6018 FBgn0011760 8034.93 648.8766667 999.3333333 0.000808968 0.010017312 0.006504336 -17 -2 -9.5 0.01 dme-miR-79-3p 6mer2-7 AGCTTT X 4699387 4699392 + X_4699387_4699392_+ 0.99980223 0.997737685 0.998769957 0.001459822 ctp FBtr0070707|FBtr0070704|FBtr0070706|FBtr0307065 4698457|4698457|4698457|4698457 4702034|4699456|4699456|4702034 X + 4699368 4699429 3'utr ctp FlyBase G58851.1 CAAATGTTTTATGTGCTGGAGCTTTGTTTGGACTTTTGATTTACATATGAAACCTGCGCAAT 20 4699404 0.659604972 8 18 219 0.965517241 1.447158031 0.344827586 0.25 0.482758621 20 1 0 28 X:4699368-4699429 6 ctp FBtr0070706|FBtr0307065|FBtr0070707|FBtr0070704 4698457|4698457|4698457|4698457 4699456|4702034|4702034|4699456 AGCTTT 6mer2-7 dme-miR-79-3p X + 4699369 4699453 3'utr ctp FlyBase G44508.2 AAATGTTTTATGTGCTGGAGCTTTGTTTGGACTTTTGATTTACATATGAAACCTGCGCAATTAAACAATTGTTAACAAGAAAAGA 15 4699403 0.95902528 9 13 116 0.791666667 0.801632346 0 0.533333333 0.708333333 15 3 2 19 X:4699369-4699453 6 12 6019 FBgn0011760 8034.93 648.8766667 999.3333333 0.001493479 0.018493499 0.012008005 -17 -16 -16.5 0.01 dme-miR-283-5p 7mer-A1 GATATTA X 4705047 4705053 + X_4705047_4705053_+ 0.707151187 0.782911824 0.745031506 0.053570834 l(1)G0334 FBtr0070709|FBtr0070711|FBtr0070708|FBtr0070710 4704769|4704769|4704769|4704769 4705123|4705265|4705123|4705123 X + 4705028 4705110 3'utr l(1)G0334 FlyBase G58859.1 ACTCTGGGGTACTGCATTGGATATTATATTGCGAACGTGTTCAATAAGGATAAAGCGAGGTGTAAATTGTTGAAAATATAAAA 14 4705072 0.981481815 8 10 105 0.75 0.77815125 0.1875 0.142857143 0.25 14 3 1 12 X:4705028-4705110 7 l(1)G0334 FBtr0070710|FBtr0070708|FBtr0070711|FBtr0070709 4704769|4704769|4704769|4704769 4705123|4705123|4705265|4705123 GATATTA 7mer-A1 dme-miR-283-5p X + 4705017 4705075 3'utr l(1)G0334 FlyBase G44516.1 CGCACCACATAACTCTGGGGTACTGCATTGGATATTATATTGCGAACGTGTTCAATAAG 9 4705044 0.978292364 4 8 56 0.9 0.954242509 0.1 0.111111111 0.2 9 1 0 9 X:4705017-4705075 7 6 6020 FBgn0028325 2302.306667 161.7833333 248.5566667 0.002606082 0.037086639 0.024139365 -25 3 -11 0.01 dme-bantam-3p 6mer3-8 TGATCT X 482668 482673 + X_482668_482673_+ 1 1 1 0 CG3176 FBtr0336920|FBtr0343501 482436|482580 482768|482768 X + 482623 482697 3'utr CG3176 FlyBase G57740.1 AAAGAATATAGAGCTATATAGTATTTAACATTAGGCAAAAATCTTTGATCTATTCTTCGTTAGCGCTGTGCGAGT 15 482667 0.985099664 9 15 127 1 1.301029996 0.1 0.333333333 0.5 15 0 0 20 X:482623-482697 6 CG3176 FBtr0336920|FBtr0343501 482436|482580 482768|482768 TGATCT 6mer3-8 dme-bantam-3p X + 482655 482706 3'utr CG3176 FlyBase G43687.1 AGGCAAAAATCTTTGATCTATTCTTCGTTAGCGCTGTGCGAGTACTGCCAGA 13 482674 0.804898776 7 11 87 0.909090909 1.301029996 0.318181818 0.538461538 0.727272727 13 2 0 20 X:482655-482706 6 9.5 6021 FBgn0029524 104.6533333 24.39 37.14333333 0.090775895 0.389503895 0.255765952 1 -6 -2.5 0.01 dme-miR-184-5p 6mer2-7 GATAAG X 490591 490596 + X_490591_490596_+ 1 1 1 0 CG3156 FBtr0070079 490570 490725 X + 490587 490628 3'utr CG3156 FlyBase G57745.1 TTAAGATAAGTTGGACTAAACGGCTTAGAAGTGGCCCCACCG 15 490598 0.957127362 3 14 68 0.944444444 1.230448921 0.5 0.133333333 0.277777778 15 1 0 17 X:490587-490628 6 CG3156 FBtr0070079 490570 490725 GATAAG 6mer2-7 dme-miR-184-5p X + 490589 490614 3'utr CG3156 FlyBase G43689.1 AAGATAAGTTGGACTAAACGGCTTAG 7 490598 0.726130396 2 7 29 1 1.041392685 0.272727273 0.571428571 0.727272727 7 0 0 11 X:490589-490614 6 10.5 6022 FBgn0023536 204 10.62666667 16.39 0.051470588 0.988080301 0.640634533 -7 -7 -7 0.01 dme-miR-317-3p 8mer-A1 TGTGTTCA X 490671 490678 + X_490671_490678_+ 0.631136783 0.631136783 0.631136783 0 CG3156 FBtr0070079 490570 490725 X + 490633 490684 3'utr CG3156 FlyBase G57746.1 TTGGTGGTGGACCAGCTAGTGCTATTGTTACCGGGATATGTGTTCATAAATC 11 490669 0.987272938 5 11 101 1 1.079181246 0.416666667 0.090909091 0.166666667 11 0 0 12 X:490633-490684 8 CG3156 FBtr0070079 490570 490725 TGTGTTCA 8mer-A1 dme-miR-317-3p X + 490618 490682 3'utr CG3156 FlyBase G43690.1 TGGCCCCACCGCTCCTTGGTGGTGGACCAGCTAGTGCTATTGTTACCGGGATATGTGTTCATAAA 14 490670 0.983922151 9 13 103 0.9 1.255272505 0.1 0.285714286 0.5 14 2 0 18 X:490618-490682 8 10.5 6023 FBgn0023536 204 10.62666667 16.39 0.051470588 0.988080301 0.640634533 2 1 1.5 0.01 dme-miR-79-3p 6mer3-8 TAGCTT X 4914175 4914180 + X_4914175_4914180_+ 1 1 1 0 CG32772 FBtr0342951|FBtr0343533|FBtr0300997|FBtr0342952 4914143|4914143|4914143|4914143 4914961|4915161|4914961|4915161 X + 4914138 4914256 stop_codon CG32772 FlyBase G58862.1 TAAGTAGGCTAGTTAAGAATGGAAAGAAGGTCTCTTTTAGCTTAAGCCCCGAACGATCAGCTGCTAAAGTCCCTGATTAGCATAGCCATAGCCAAAGTAGCATCACATTCAGCACATAC 64 4914173 0.977306137 8 63 413 0.971830986 1.838849091 0.154929577 0.109375 0.197183099 64 2 0 69 X:4914138-4914256 6 CG32772 FBtr0342952|FBtr0300997|FBtr0343533|FBtr0342951 4914143|4914143|4914143|4914143 4915161|4914961|4915161|4914961 TAGCTT 6mer3-8 dme-miR-79-3p X + 4914143 4914234 stop_codon CG32772 FlyBase G44518.1 AGGCTAGTTAAGAATGGAAAGAAGGTCTCTTTTAGCTTAAGCCCCGAACGATCAGCTGCTAAAGTCCCTGATTAGCATAGCCATAGCCAAAG 51 4914173 0.957867862 12 51 347 1 1.892094603 0.115384615 0.37254902 0.58974359 51 0 0 78 X:4914143-4914234 6 50.5 6024 FBgn0052772 546.74 21.57666667 33.00666667 0.092365658 2.340491271 1.529993941 2 2 2 0.01 dme-miR-14-3p 6mer3-8 AAGACT X 4921697 4921702 - X_4921697_4921702_- 1 1 1 0 CG44774 FBtr0343142 4921676 4927583 X - 4921685 4921777 3'utr CG44774 FlyBase G64792.1 AAACACAGAACCATACAAATTGTAGCCTTACAAACAGAAACAATTATTTATGTGTTAAGAGAACATGTTTTTGTAAAGACTAAATACAAATGA 29 4921705 0.956249217 11 28 189 0.96969697 1.505149978 0.03030303 0.137931034 0.242424242 29 1 0 32 X:4921685-4921777 6 CG44774 FBtr0343142 4921676 4927583 AAGACT 6mer3-8 dme-miR-14-3p X - 4921686 4921720 3'utr CG44774 FlyBase G48808.1 AGAGAACATGTTTTTGTAAAGACTAAATACAAATG 10 4921706 0.669483184 5 8 69 0.8125 0.812913357 0.375 0.5 0.6875 10 2 1 13 X:4921686-4921720 6 11 6025 FBgn0266000 3691.093333 67.20666667 103.37 0.002980147 0.163674239 0.106413853 3 4 3.5 0.01 dme-miR-13b-2-5p 6mer3-8 TTTGAC X 4927241 4927246 - X_4927241_4927246_- 0.926322126 0.999999902 0.963161014 0.052098072 CG44774 FBtr0343138|FBtr0343140|FBtr0343142|FBtr0343141|FBtr0343139|FBtr0343136|FBtr0345209|FBtr0343135|FBtr0343137 4926662|4926662|4921676|4926662|4926662|4926662|4926662|4926662|4926662 4927583|4927583|4927583|4927583|4927583|4927583|4927583|4927583|4927583 X - 4927201 4927273 3'utr CG44774 FlyBase G64807.1 TTAATGTAGCGCCCCGGTAGCCTGTAGTTTGACTCCAACAAGTTCGCTCCTGGCGCTTCACAGGCGCTGGAAA 585 4927217 0.761601105 15 342 2434 0.598382749 1.079181246 0.037735849 0.206837607 0.374663073 585 262 36 444 X:4927201-4927273 6 CG44774 FBtr0343139|FBtr0343141|FBtr0343142|FBtr0343138|FBtr0343140|FBtr0343137|FBtr0343135|FBtr0345209|FBtr0343136 4926662|4926662|4921676|4926662|4926662|4926662|4926662|4926662|4926662 4927583|4927583|4927583|4927583|4927583|4927583|4927583|4927583|4927583 TTTGAC 6mer3-8 dme-miR-13b-2-5p X - 4927202 4927274 3'utr CG44774 FlyBase G48825.1 TTTAATGTAGCGCCCCGGTAGCCTGTAGTTTGACTCCAACAAGTTCGCTCCTGGCGCTTCACAGGCGCTGGAA 402 4927256 0.810998418 13 262 1649 0.672638436 1.16879202 0.034201954 0.368159204 0.586319218 402 174 27 413 X:4927202-4927274 6 282.5 6026 FBgn0266000 3691.093333 67.20666667 103.37 0.076535588 4.203452038 2.732901229 -29 10 -9.5 0.01 dme-miR-8-3p 6mer3-8 CAGTAT X 4927350 4927355 - X_4927350_4927355_- 1 1 1 0 CG44774 FBtr0343138|FBtr0343140|FBtr0343142|FBtr0343141|FBtr0343139|FBtr0343136|FBtr0345209|FBtr0343135|FBtr0343137 4926662|4926662|4921676|4926662|4926662|4926662|4926662|4926662|4926662 4927583|4927583|4927583|4927583|4927583|4927583|4927583|4927583|4927583 X - 4927331 4927423 3'utr CG44774 FlyBase G64808.1 AATATTTAACATTTCAAGGAACACCTTAGCCTAGACGTTACTTTAGCCTAGACTAGAGCACTGAACTACAGTATGGGCGAATGAGTCCACGCA 60 4927357 0.83351416 14 42 276 0.683544304 1.431363764 0.113924051 0.216666667 0.405063291 60 24 1 54 X:4927331-4927423 6 CG44774 FBtr0343139|FBtr0343141|FBtr0343142|FBtr0343138|FBtr0343140|FBtr0343137|FBtr0343135|FBtr0345209|FBtr0343136 4926662|4926662|4921676|4926662|4926662|4926662|4926662|4926662|4926662 4927583|4927583|4927583|4927583|4927583|4927583|4927583|4927583|4927583 CAGTAT 6mer3-8 dme-miR-8-3p X - 4927331 4927522 3'utr CG44774 FlyBase G48826.1 AGTAACCACCCTGTTACGTTTGTTATACACTAAGCTATTTAACGGCGACCGAAAGCCAAGCTCCCTTCCTTAGCCGCAGGTTCCATATCATTCAAGAGTAATATTTAACATTTCAAGGAACACCTTAGCCTAGACGTTACTTTAGCCTAGACTAGAGCACTGAACTACAGTATGGGCGAATGAGTCCACGCA 100 4927357 0.875410259 24 87 483 0.887323944 1.799340549 0.084507042 0.32 0.521126761 100 15 1 126 X:4927331-4927522 6 36.5 6027 FBgn0266000 3691.093333 67.20666667 103.37 0.009888669 0.543100883 0.353100513 2 2 2 0.01 dme-miR-11-3p 8mer-m1 CTGTGATG X 4955091 4955098 + X_4955091_4955098_+ 0.462274223 0.462274223 0.462274223 0 Ptp4E FBtr0301796|FBtr0343529|FBtr0070724|FBtr0301794|FBtr0343528|FBtr0301793 4954603|4954603|4954603|4954603|4955001|4954603 4955916|4955425|4955916|4955916|4955916|4955916 X + 4955068 4955111 3'utr Ptp4E FlyBase G58878.1 CATATACTATACGTAAAATCTGCCTGTGATGTGCTGGATGTGAT 54 4955088 0.758107803 8 45 393 0.887096774 1.439332694 0.35483871 0.111111111 0.225806452 54 6 1 55 X:4955068-4955111 8 Ptp4E FBtr0301793|FBtr0343528|FBtr0301794|FBtr0070724|FBtr0343529|FBtr0301796 4954603|4955001|4954603|4954603|4954603|4954603 4955916|4955916|4955916|4955916|4955425|4955916 CTGTGATG 8mer-m1 dme-miR-11-3p X + 4955069 4955144 3'utr Ptp4E FlyBase G44535.1 ATATACTATACGTAAAATCTGCCTGTGATGTGCTGGATGTGATTTGTCTACGAAGTGGCACTCGGAGTTGCTGTCA 49 4955087 0.982916455 9 45 374 0.915492958 1.511883361 0.436619718 0.346938776 0.549295775 49 5 1 65 X:4955069-4955144 8 49.5 6028 FBgn0004368 1052.996667 19.90333333 30.39 0.047008696 2.4870206 1.628825271 3 4 3.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 4955401 4955406 + X_4955401_4955406_+ 1 1 1 0 Ptp4E FBtr0301796|FBtr0343529|FBtr0070724|FBtr0301794|FBtr0343528|FBtr0301793 4954603|4954603|4954603|4954603|4955001|4954603 4955916|4955425|4955916|4955916|4955916|4955916 X + 4955345 4955418 3'utr Ptp4E FlyBase G58879.1 GCTTCAGGTTTAACAATCTGCTACCTATTTTTGTATCTGTACCTACCTGTATCCCTGTACCTACTGTATAACTA 40 4955400 0.984366928 7 40 319 1 1.698970004 0.08 0.225 0.38 40 0 0 50 X:4955345-4955418 6 Ptp4E FBtr0301793|FBtr0343528|FBtr0301794|FBtr0070724|FBtr0343529|FBtr0301796 4954603|4955001|4954603|4954603|4954603|4954603 4955916|4955916|4955916|4955916|4955425|4955916 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X + 4955375 4955413 3'utr Ptp4E FlyBase G44536.1 TTGTATCTGTACCTACCTGTATCCCTGTACCTACTGTAT 22 4955400 0.79657405 3 21 168 0.971428571 1.531478917 0.228571429 0.409090909 0.628571429 22 1 0 34 X:4955375-4955413 6 26.5 6029 FBgn0004368 1052.996667 19.90333333 30.39 0.025166271 1.33143527 0.871997368 1 1 1 0.01 dme-miR-1012-3p 6mer2-7 TGACTA X 4955558 4955563 + X_4955558_4955563_+ 1 1 1 0 Ptp4E FBtr0301796|FBtr0070724|FBtr0301794|FBtr0343528|FBtr0301793 4954603|4954603|4954603|4955001|4954603 4955916|4955916|4955916|4955916|4955916 X + 4955548 4955597 3'utr Ptp4E FlyBase G58881.1 ATTACCACTATGACTATTACTCTAAACGATTGTGTATTATTTTATTATAT 18 4955576 0.859359106 4 16 172 0.956521739 1.342422681 0 0.166666667 0.347826087 18 1 0 22 X:4955548-4955597 6 Ptp4E FBtr0301793|FBtr0343528|FBtr0301794|FBtr0070724|FBtr0301796 4954603|4955001|4954603|4954603|4954603 4955916|4955916|4955916|4955916|4955916 TGACTA 6mer2-7 dme-miR-1012-3p X + 4955513 4955576 3'utr Ptp4E FlyBase G44537.1 GCGTCGATCGATATTATGACCATACTATGTTTACCATTACCACTATGACTATTACTCTAAACGA 5 4955564 0.968575673 4 4 33 1 0.84509804 0 0.4 0.571428571 5 0 0 7 X:4955513-4955576 6 5.5 6030 FBgn0004368 1052.996667 19.90333333 30.39 0.005223188 0.276335622 0.180980586 -18 -6 -12 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT X 503367 503372 + X_503367_503372_+ 1 1 1 0 svr FBtr0070086|FBtr0070085|FBtr0344737|FBtr0340146 502970|502970|502970|502970 504319|504319|504319|504319 X + 503331 503427 5'utr svr FlyBase G57756.1 TTTTTCGCATTTTCATACGCTTATATGCCAGCCTATGTTCCTTCCACGCCATTACTTCAGACGCGCACATATTTAGTGGATGCTTGATTTGTATATA 24 503368 0.963464403 7 21 187 0.888888889 1.380211242 0.148148148 0.125 0.222222222 24 3 0 24 X:503331-503427 6 svr FBtr0070085|FBtr0344737|FBtr0340146|FBtr0070086 502970|502970|502970|502970 504319|504319|504319|504319 GTTCCT 6mer2-7 dme-miR-276a-3p X + 503353 503391 5'utr svr FlyBase G43698.1 ATATGCCAGCCTATGTTCCTTCCACGCCATTACTTCAGA 12 503368 0.975682759 4 12 79 1 1.322219295 0.047619048 0.5 0.714285714 12 0 0 21 X:503353-503391 6 13 6031 FBgn0004648 2059.716667 56.39666667 86.34666667 0.006311548 0.230510077 0.150555899 -1 -1 -1 0.01 dme-miR-252-5p 8mer-m1 GTACTTAG X 503506 503513 + X_503506_503513_+ 0.636789085 0.636789085 0.636789085 0 svr FBtr0070086|FBtr0070085|FBtr0344737|FBtr0340146 502970|502970|502970|502970 504319|504319|504319|504319 X + 503489 503549 5'utr svr FlyBase G57757.1 AAGGAAATAAGCGAATTGTACTTAGGCAATATGCAGAAATTGGCCCACTTATGGTCATCGA 12 503505 0.983825368 3 11 59 0.916666667 1.041392685 0 0 0 12 1 0 11 X:503489-503549 8 svr FBtr0070085|FBtr0344737|FBtr0340146|FBtr0070086 502970|502970|502970|502970 504319|504319|504319|504319 GTACTTAG 8mer-m1 dme-miR-252-5p X + 503479 503539 5'utr svr FlyBase G43699.1 GAAATAAATTAAGGAAATAAGCGAATTGTACTTAGGCAATATGCAGAAATTGGCCCACTTA 7 503505 0.95680301 3 6 32 1 0.954242509 0.444444444 0.142857143 0.333333333 7 0 0 9 X:503479-503539 8 6.5 6032 FBgn0004648 2059.716667 56.39666667 86.34666667 0.003155774 0.115255039 0.075277949 1 1 1 0.01 dme-miR-2b-2-5p 6mer3-8 TTGAAG X 5069192 5069197 + X_5069192_5069197_+ 1 1 1 0 ovo FBtr0070738|FBtr0301914|FBtr0100408|FBtr0070739|FBtr0070740 5069079|5069079|5069079|5069079|5069079 5070772|5070929|5070772|5070929|5070929 X + 5069160 5069211 3'utr ovo FlyBase G58885.1 TCGAATCACTTAAGCAAACCAACATTGTGACTTTGAAGTTTTTTGAAAACTG 110 5069185 0.749810859 6 107 631 0.977272727 1.508529719 0.583333333 0.136363636 0.28030303 110 0 3 129 X:5069160-5069211 6 ovo FBtr0070740|FBtr0100408|FBtr0070739|FBtr0070738|FBtr0301914 5069079|5069079|5069079|5069079|5069079 5070929|5070772|5070929|5070772|5070929 TTGAAG 6mer3-8 dme-miR-2b-2-5p X + 5069167 5069200 3'utr ovo FlyBase G44540.1 ACTTAAGCAAACCAACATTGTGACTTTGAAGTTT 78 5069185 0.735710399 5 75 412 0.96 1.77815125 0.672 0.384615385 0.616 78 4 1 120 X:5069167-5069200 6 93.5 6033 FBgn0003028 7.666666667 0.146666667 0.23 12.19565217 637.5 406.5217391 7 7 7 0.01 dme-miR-304-5p 7mer-A1 GAGATTA X 5069248 5069254 + X_5069248_5069254_+ 0.823349562 0.823349562 0.823349562 0 ovo FBtr0070738|FBtr0301914|FBtr0100408|FBtr0070739|FBtr0070740 5069079|5069079|5069079|5069079|5069079 5070772|5070929|5070772|5070929|5070929 X + 5069226 5069274 3'utr ovo FlyBase G58886.1 TGCGGAGGATACGGAATTATTGGAGATTATGCTTATTATGTATATTTTT 29 5069251 0.989747065 3 29 293 1 1.579783597 0.289473684 0.24137931 0.421052632 29 0 0 38 X:5069226-5069274 7 ovo FBtr0070740|FBtr0100408|FBtr0070739|FBtr0070738|FBtr0301914 5069079|5069079|5069079|5069079|5069079 5070929|5070772|5070929|5070772|5070929 GAGATTA 7mer-A1 dme-miR-304-5p X + 5069236 5069272 3'utr ovo FlyBase G44541.1 ACGGAATTATTGGAGATTATGCTTATTATGTATATTT 18 5069252 0.767705229 4 18 181 1 1.380211242 0 0.277777778 0.458333333 18 0 0 24 X:5069236-5069272 7 23.5 6034 FBgn0003028 7.666666667 0.146666667 0.23 3.065217391 160.2272727 102.173913 -3 -4 -3.5 0.01 dme-miR-1008-3p 6mer2-7 GCTGTG X 5069352 5069357 + X_5069352_5069357_+ 1 1 1 0 ovo FBtr0070738|FBtr0301914|FBtr0100408|FBtr0070739|FBtr0070740 5069079|5069079|5069079|5069079|5069079 5070772|5070929|5070772|5070929|5070929 X + 5069317 5069370 3'utr ovo FlyBase G58887.1 AGTACCCACTGTATCATGCTACCCCACTTCACTTTGCTGTGCAAATCTCTCTCA 19 5069350 0.985975946 5 19 160 1 1.342422681 0 0.157894737 0.272727273 19 0 0 22 X:5069317-5069370 6 ovo FBtr0070740|FBtr0100408|FBtr0070739|FBtr0070738|FBtr0301914 5069079|5069079|5069079|5069079|5069079 5070929|5070772|5070929|5070772|5070929 GCTGTG 6mer2-7 dme-miR-1008-3p X + 5069332 5069371 3'utr ovo FlyBase G44542.1 ATGCTACCCCACTTCACTTTGCTGTGCAAATCTCTCTCAC 6 5069350 0.982469194 2 5 57 0.888888889 0.903089987 0 0.333333333 0.555555556 6 1 0 8 X:5069332-5069371 6 11.5 6035 FBgn0003028 7.666666667 0.146666667 0.23 1.5 78.40909091 50 2 2 2 0.01 dme-bantam-3p 6mer3-8 TGATCT X 5069937 5069942 + X_5069937_5069942_+ 1 1 1 0 ovo FBtr0070738|FBtr0301914|FBtr0100408|FBtr0070739|FBtr0070740 5069079|5069079|5069079|5069079|5069079 5070772|5070929|5070772|5070929|5070929 X + 5069919 5069958 3'utr ovo FlyBase G58888.1 AATCGAATCGCGAGAATATGATCTACTGAATATATAGTTT 15 5069937 0.705586519 2 14 94 1 1.278753601 0.105263158 0.266666667 0.421052632 15 0 0 19 X:5069919-5069958 6 ovo FBtr0070740|FBtr0100408|FBtr0070739|FBtr0070738|FBtr0301914 5069079|5069079|5069079|5069079|5069079 5070929|5070772|5070929|5070772|5070929 TGATCT 6mer3-8 dme-bantam-3p X + 5069914 5069953 3'utr ovo FlyBase G44543.1 TGGAAAATCGAATCGCGAGAATATGATCTACTGAATATAT 11 5069937 0.958003785 4 11 62 1 1.230448921 0.176470588 0.363636364 0.588235294 11 0 0 17 X:5069914-5069953 6 12.5 6036 FBgn0003028 7.666666667 0.146666667 0.23 1.630434783 85.22727273 54.34782609 0 0 0 0.01 dme-bantam-3p 6mer3-8 TGATCT X 5069998 5070003 + X_5069998_5070003_+ 1 1 1 0 ovo FBtr0070738|FBtr0301914|FBtr0100408|FBtr0070739|FBtr0070740 5069079|5069079|5069079|5069079|5069079 5070772|5070929|5070772|5070929|5070929 X + 5069978 5070016 3'utr ovo FlyBase G58889.1 GGCAATACCACCAATTGTACTGATCTTTAATGAACAAAC 7 5070005 0.764810314 5 7 55 1 0.903089987 0 0.142857143 0.25 7 0 0 8 X:5069978-5070016 6 ovo FBtr0070740|FBtr0100408|FBtr0070739|FBtr0070738|FBtr0301914 5069079|5069079|5069079|5069079|5069079 5070929|5070772|5070929|5070772|5070929 TGATCT 6mer3-8 dme-bantam-3p X + 5069977 5070010 3'utr ovo FlyBase G44544.1 AGGCAATACCACCAATTGTACTGATCTTTAATGA 5 5069995 0.980426113 4 5 37 1 0.903089987 0.25 0.4 0.625 5 0 0 8 X:5069977-5070010 6 6 6037 FBgn0003028 7.666666667 0.146666667 0.23 0.782608696 40.90909091 26.08695652 -7 3 -2 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 5072749 5072755 - X_5072749_5072755_- 0.661614297 0.661615511 0.661614904 8.49E-07 CG32767 FBtr0331758 5071025 5077136 X - 5072729 5072776 3'utr CG32767 FlyBase G64823.1 CGTATTTATACACTATGAATGTCTAGTCGTATTTTCAGTATTATGTAA 21 5072744 0.655660895 8 20 228 0.961538462 1.397940009 0.076923077 0.142857143 0.307692308 21 1 0 25 X:5072729-5072776 7 CG32767 FBtr0331758 5071025 5077136 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X - 5072730 5072771 3'utr CG32767 FlyBase G48842.1 TTATACACTATGAATGTCTAGTCGTATTTTCAGTATTATGTA 12 5072757 0.842752395 4 9 113 0.785714286 0.740362689 0 0.166666667 0.285714286 12 2 1 11 X:5072730-5072771 7 15.5 6038 FBgn0052767 1383.503333 20.81666667 32.11666667 0.011203442 0.744595677 0.482615464 -11 2 -4.5 0.01 dme-miR-79-3p 8mer-A1 TAGCTTTA X 5075052 5075059 - X_5075052_5075059_- 0.625364009 0.451602351 0.53848318 0.122868006 CG32767 FBtr0331757|FBtr0302118|FBtr0302119|FBtr0300995|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 X - 5075021 5075093 3'utr CG32767 FlyBase G64825.1 TTCAGTGTAGTCTTTAAGCTGAAAGAGCATGCTTTAGCTTTAGCTTTACCCTAACATACGAAACTGCATAAGC 16 5075058 0.985926794 7 16 129 1 1.342422681 0.318181818 0.25 0.454545455 16 0 0 22 X:5075021-5075093 8 CG32767 FBtr0300995|FBtr0302119|FBtr0302118|FBtr0331757|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 TAGCTTTA 8mer-A1 dme-miR-79-3p X - 5075039 5075077 3'utr CG32767 FlyBase G48844.1 AGCTGAAAGAGCATGCTTTAGCTTTAGCTTTACCCTAAC 11 5075054 0.983765933 4 11 99 1 1.146128036 0.214285714 0.272727273 0.428571429 11 0 0 14 X:5075039-5075077 8 12 6039 FBgn0052767 1383.503333 20.81666667 32.11666667 0.008673633 0.576461169 0.373637779 -1 -5 -3 0.01 dme-miR-277-3p 6mer3-8 TGCATT X 5075136 5075141 - X_5075136_5075141_- 1 1 1 0 CG32767 FBtr0331757|FBtr0302118|FBtr0302119|FBtr0300995|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 X - 5075130 5075169 3'utr CG32767 FlyBase G64826.1 AACACCCACACGATACTTGATTATGATTTGCATTACTATA 11 5075153 0.97860212 4 11 93 1 1.146128036 0 0.272727273 0.428571429 11 0 0 14 X:5075130-5075169 6 CG32767 FBtr0300995|FBtr0302119|FBtr0302118|FBtr0331757|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 TGCATT 6mer3-8 dme-miR-277-3p X - 5075104 5075171 3'utr CG32767 FlyBase G48845.1 TAAACACCCACACGATACTTGATTATGATTTGCATTACTATATACTATAGATAATCTGTAGCTAAGTG 16 5075153 0.988112881 6 15 128 0.947368421 1.255272505 0.052631579 0.1875 0.315789474 16 1 0 18 X:5075104-5075171 6 12 6040 FBgn0052767 1383.503333 20.81666667 32.11666667 0.008673633 0.576461169 0.373637779 12 12 12 0.01 dme-miR-13b-2-5p 6mer3-8 TTTGAC X 5075251 5075256 - X_5075251_5075256_- 1 1 1 0 CG32767 FBtr0331757|FBtr0302118|FBtr0302119|FBtr0300995|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 X - 5075183 5075293 3'utr CG32767 FlyBase G64827.1 TCTTATGTGCAATCTCCCCCCATCACTGAAACTGAACTTTGACCTCTTTCTCACCTTCGCTCGAACACCTTGTGGTTTCCTTAATTAGTTGCTAAGTATCCACGATAAACA 43 5075255 0.950771816 12 40 338 0.943396226 1.698970004 0.264150943 0.23255814 0.377358491 43 3 0 50 X:5075183-5075293 6 CG32767 FBtr0300995|FBtr0302119|FBtr0302118|FBtr0331757|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 TTTGAC 6mer3-8 dme-miR-13b-2-5p X - 5075202 5075304 3'utr CG32767 FlyBase G48846.1 TTTTTAAAAGTTCTTATGTGCAATCTCCCCCCATCACTGAAACTGAACTTTGACCTCTTTCTCACCTTCGCTCGAACACCTTGTGGTTTCCTTAATTAGTTGC 34 5075255 0.90333967 14 30 282 0.849056604 1.653212514 0.264150943 0.441176471 0.641509434 34 8 0 45 X:5075202-5075304 6 19 6041 FBgn0052767 1383.503333 20.81666667 32.11666667 0.013733252 0.912730184 0.59159315 -1 -1 -1 0.01 dme-miR-8-3p 7mer-m8 CAGTATT X 5075372 5075378 - X_5075372_5075378_- 0.661615243 0.661615243 0.661615243 0 CG32767 FBtr0331757|FBtr0302118|FBtr0302119|FBtr0300995|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 X - 5075359 5075403 3'utr CG32767 FlyBase G64828.2 ACTTTGTTTTCAATTACCTAAACCGCAGTATTTGTTTCATATAAT 41 5075371 0.644971286 9 35 405 0.866666667 1.113943352 0.066666667 0.097560976 0.177777778 41 4 2 39 X:5075359-5075403 7 CG32767 FBtr0300995|FBtr0302119|FBtr0302118|FBtr0331757|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 CAGTATT 7mer-m8 dme-miR-8-3p X - 5075360 5075403 3'utr CG32767 FlyBase G48847.1 ACTTTGTTTTCAATTACCTAAACCGCAGTATTTGTTTCATATAA 30 5075371 0.637515737 8 26 304 0.888888889 1.505149978 0.055555556 0.2 0.333333333 30 4 0 32 X:5075360-5075403 7 35.5 6042 FBgn0052767 1383.503333 20.81666667 32.11666667 0.025659497 1.705364291 1.105345096 -7 -7 -7 0.01 dme-bantam-3p 7mer-m8 TGATCTC X 5075689 5075695 - X_5075689_5075695_- 0.661615243 0.661615243 0.661615243 0 CG32767 FBtr0331757|FBtr0302118|FBtr0302119|FBtr0300995|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 X - 5075544 5075720 3'utr CG32767 FlyBase G64829.1 AATTTTAGTTGTATAGTTTTGCATTTGATCTCTCGGCTTTAGTTTTTGCATTCAAAGCGAAAGAAAATTCAGTTCCTGTGTAATTGCAAAGATAACTTGAGAAATTGTATTATAATTTAATGGACTAGGCAATCAATGTGCTGCTTTCATGCGGAAAGATATGCATATATGTATGAA 302 5075696 0.987367697 35 289 3392 0.959128065 1.944482672 0.108991826 0.185430464 0.329700272 302 12 3 352 X:5075544-5075720 7 CG32767 FBtr0300995|FBtr0302119|FBtr0302118|FBtr0331757|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 TGATCTC 7mer-m8 dme-bantam-3p X - 5075671 5075720 3'utr CG32767 FlyBase G48849.1 AATTTTAGTTGTATAGTTTTGCATTTGATCTCTCGGCTTTAGTTTTTGCA 181 5075696 0.708418765 13 173 2079 0.96 2.421603927 0.101818182 0.397790055 0.603636364 181 11 0 264 X:5075671-5075720 7 219.5 6043 FBgn0052767 1383.503333 20.81666667 32.11666667 0.158655201 10.54443555 6.834457706 1 1 1 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA X 5075844 5075849 - X_5075844_5075849_- 1 1 1 0 CG32767 FBtr0331757|FBtr0302118|FBtr0302119|FBtr0300995|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 X - 5075834 5075897 3'utr CG32767 FlyBase G64831.1 TAGTGTAAAAAAAAAAATGAAGAAAATCTCAAATGAACTTGTAACTTGATGTGAAACACGAATT 15 5075851 0.970654228 6 14 82 1 1.255272505 0.166666667 0.2 0.333333333 15 0 0 18 X:5075834-5075897 6 CG32767 FBtr0300995|FBtr0302119|FBtr0302118|FBtr0331757|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 ATGTGA 6mer3-8 dme-miR-1003-3p X - 5075830 5075865 3'utr CG32767 FlyBase G48851.1 ATGAACTTGTAACTTGATGTGAAACACGAATTGTTT 9 5075849 0.991305702 5 6 57 0.727272727 0.602059991 0.090909091 0.222222222 0.363636364 9 2 1 8 X:5075830-5075865 6 8 6044 FBgn0052767 1383.503333 20.81666667 32.11666667 0.005782422 0.384307446 0.249091853 2 0 1 0.01 dme-bantam-3p 6mer3-8 TGATCT X 5075934 5075939 - X_5075934_5075939_- 1 1 1 0 CG32767 FBtr0331757|FBtr0302118|FBtr0302119|FBtr0300995|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 X - 5075922 5075978 3'utr CG32767 FlyBase G64832.1 TGCTCTCGTGCCCTCTCTGTCACTGTCCCCATCTCACTCTGATCTGTTTATAAGAAG 42 5075940 0.789367719 10 39 418 0.931818182 1.311753861 0.181818182 0.047619048 0.090909091 42 2 1 41 X:5075922-5075978 6 CG32767 FBtr0300995|FBtr0302119|FBtr0302118|FBtr0331757|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 TGATCT 6mer3-8 dme-bantam-3p X - 5075925 5075956 3'utr CG32767 FlyBase G48852.1 CTGTCCCCATCTCACTCTGATCTGTTTATAAG 12 5075939 0.763357932 4 12 116 1 1.204119983 0 0.25 0.4375 12 0 0 16 X:5075925-5075956 6 24 6045 FBgn0052767 1383.503333 20.81666667 32.11666667 0.017347266 1.152922338 0.747275558 1 0 0.5 0.01 dme-miR-308-3p 8mer-m1 CTGTGATT X 508136 508143 + X_508136_508143_+ 0.385560641 0.385560641 0.385560641 0 svr FBtr0344738|FBtr0290017|FBtr0070087|FBtr0070084|FBtr0290016|FBtr0070081|FBtr0344739 507876|508037|508037|507876|508037|507876|508037 509072|508424|509072|509072|509072|509072|508509 X + 508084 508150 5'utr svr FlyBase G57766.1 AACCACCAGGGATCACCTAATCCCCGATCGACTTTAACCACACACAACATAACTGTGATTCAAAACG 161 508118 0.809626385 9 156 714 0.970588235 1.995635195 0.019607843 0.186335404 0.357843137 161 5 1 198 X:508084-508150 8 svr FBtr0070081|FBtr0344739|FBtr0070084|FBtr0290016|FBtr0344738|FBtr0290017|FBtr0070087 507876|508037|507876|508037|507876|508037|508037 509072|508509|509072|509072|509072|508424|509072 CTGTGATT 8mer-m1 dme-miR-308-3p X + 508045 508178 5'utr svr FlyBase G43702.1 TGATAGATGTTCCCAATCAAACACAATCTCGAGTGACACAACCACCAGGGATCACCTAATCCCCGATCGACTTTAACCACACACAACATAACTGTGATTCAAAACGTTTTCAAGAGAAACCAACGCTCTCCTTT 122 508118 0.958675674 13 116 560 0.963190184 2.195899652 0.030674847 0.278688525 0.460122699 122 6 0 157 X:508045-508178 8 35 6046 FBgn0004648 2059.716667 56.39666667 86.34666667 0.016992628 0.620604055 0.405342804 18 18 18 0.01 dme-miR-184-5p 6mer3-8 TGATAA X 513577 513582 - X_513577_513582_- 1 1 1 0 elav FBtr0307173 509233 517791 X - 513524 513587 3'utr elav FlyBase G63819.1 GCTTATGATAAATGAATCTCATAGTTTAGTTTAGCGGAGGAAGTACGGCCACCTCTCCCTTAAT 35 513575 0.992163917 10 28 314 0.794871795 1.190331698 0.307692308 0.114285714 0.205128205 35 7 1 31 X:513524-513587 6 elav FBtr0307173 509233 517791 TGATAA 6mer3-8 dme-miR-184-5p X - 513544 513594 3'utr elav FlyBase G48107.1 GTTTAGCGCTTATGATAAATGAATCTCATAGTTTAGTTTAGCGGAGGAAGT 47 513575 0.915588065 6 35 427 0.77027027 1.45484486 0.22972973 0.404255319 0.621621622 47 16 1 57 X:513544-513594 6 25.5 6047 FBgn0260400 1799.413333 52.41 80.75 0.014171285 0.486548369 0.315789474 -7 -7 -7 0.01 dme-bantam-3p 8mer-A1 TGATCTCA X 513791 513798 - X_513791_513798_- 0.631136385 0.631136385 0.631136385 0 elav FBtr0307173 509233 517791 X - 513711 513820 3'utr elav FlyBase G63820.1 AAGAGGTGCCATCGGAATCCGTTGATCTCAGCTAAAAAGACATCCCCAGACATTCCCAGTCGTGTTTGGTTTAGTCCTCGTAACTCCACGATTTAAGGGGGTATCCCCCG 76 513799 0.967675496 10 76 417 1 1.995635195 0.191919192 0.263157895 0.434343434 76 0 0 99 X:513711-513820 8 elav FBtr0307173 509233 517791 TGATCTCA 8mer-A1 dme-bantam-3p X - 513761 513820 3'utr elav FlyBase G48109.1 AAGAGGTGCCATCGGAATCCGTTGATCTCAGCTAAAAAGACATCCCCAGACATTCCCAGT 47 513799 0.970093052 7 45 255 0.966666667 1.763427994 0.266666667 0.234042553 0.4 47 2 0 58 X:513761-513820 8 59 6048 FBgn0260400 1799.413333 52.41 80.75 0.032788464 1.125739363 0.730650155 1 1 1 0.01 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 513834 513841 - X_513834_513841_- 0.63113665 0.63113665 0.63113665 7.07E-08 elav FBtr0307173 509233 517791 X - 513821 513878 3'utr elav FlyBase G63821.1 TCCTCTGACAGTCACATGAAGAAGATGAAGGAATCGATCTAGTCAAGGCCCATCTAAC 44 513841 0.702031632 6 36 174 0.823529412 0.924279286 0.352941176 0.159090909 0.274509804 44 5 4 42 X:513821-513878 8 elav FBtr0307173 509233 517791 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X - 513821 513859 3'utr elav FlyBase G48110.1 AGAAGATGAAGGAATCGATCTAGTCAAGGCCCATCTAAC 24 513841 0.662849714 4 22 89 0.918918919 1.054357662 0.27027027 0.375 0.594594595 24 1 2 34 X:513821-513859 8 31.5 6049 FBgn0260400 1799.413333 52.41 80.75 0.017505706 0.601030338 0.390092879 0 0 0 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 514231 514236 - X_514231_514236_- 1 1 1 0 elav FBtr0307173|FBtr0307173|FBtr0307173 509233|509233|509233 517791|517791|517791 X - 514210 514247 3'utr elav FlyBase G63822.1 ACTGCAAACTCCTGTGAATTCTATCGAATGAATATTTA 17 514229 0.629703102 5 16 112 0.958333333 1.361727836 0.041666667 0.294117647 0.5 17 1 0 23 X:514210-514247 6 elav FBtr0307173|FBtr0307173|FBtr0307173 509233|509233|509233 517791|517791|517791 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X - 514211 514288 3'utr elav FlyBase G48111.1 TTTAGTTGATATTCTAGCTATATACGATCTGTGCGTATGTTACTGCAAACTCCTGTGAATTCTATCGAATGAATATTT 13 514238 0.982575278 6 12 97 0.894736842 0.753327667 0.263157895 0.384615385 0.578947368 13 0 2 17 X:514211-514288 6 13.5 6050 FBgn0260400 1799.413333 52.41 80.75 0.007502445 0.25758443 0.167182663 -7 2 -2.5 0.01 dme-miR-970-3p 8mer-A1 TCTTATGA X 514965 514972 - X_514965_514972_- 0.620410321 0.627862427 0.624136374 0.00526943 elav FBtr0307173 509233 517791 X - 514932 515082 3'utr elav FlyBase G63825.1 ATTGTGCAATAGTTTTAAAATGCAACTGAAGGCAAAACACAACAACAAATTTTCAAGTATCTCAAATTATAATTTCATTAGGCGAGGAAAACGAGAAATGAAATATTTGATCTTATGAAACATAATTGTATGATTACTCTATACACACCGC 48 514975 0.929408603 18 43 357 0.909090909 1.22184875 0.2 0.145833333 0.254545455 48 3 2 50 X:514932-515082 8 elav FBtr0307173 509233 517791 TCTTATGA 8mer-A1 dme-miR-970-3p X - 514936 514985 3'utr elav FlyBase G48113.1 ATGAAATATTTGATCTTATGAAACATAATTGTATGATTACTCTATACACA 13 514975 0.987028335 6 9 104 0.705882353 1.079181246 0.235294118 0.307692308 0.470588235 13 5 0 12 X:514936-514985 8 18 6051 FBgn0260400 1799.413333 52.41 80.75 0.01000326 0.343445907 0.222910217 3 3 3 0.01 dme-miR-33-5p 7mer-A1 AATGCAA X 515058 515064 - X_515058_515064_- 0.782593122 0.782911824 0.782752473 0.000225355 elav FBtr0307173 509233 517791 X - 514932 515082 3'utr elav FlyBase G63825.1 ATTGTGCAATAGTTTTAAAATGCAACTGAAGGCAAAACACAACAACAAATTTTCAAGTATCTCAAATTATAATTTCATTAGGCGAGGAAAACGAGAAATGAAATATTTGATCTTATGAAACATAATTGTATGATTACTCTATACACACCGC 48 515057 0.929408603 18 43 357 0.909090909 1.22184875 0.2 0.145833333 0.254545455 48 3 2 50 X:514932-515082 7 elav FBtr0307173 509233 517791 AATGCAA 7mer-A1 dme-miR-33-5p X - 514991 515121 3'utr elav FlyBase G48114.1 TTGTCACCGATGATCAAATTAATTGTATTAATTATAATTATTGTGCAATAGTTTTAAAATGCAACTGAAGGCAAAACACAACAACAAATTTTCAAGTATCTCAAATTATAATTTCATTAGGCGAGGAAAAC 19 515056 0.999365495 12 19 123 1 1.491361694 0.032258065 0.368421053 0.612903226 19 0 0 31 X:514991-515121 7 8 6052 FBgn0260400 1799.413333 52.41 80.75 0.004445893 0.152642625 0.099071207 -7 -8 -7.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 515404 515410 - X_515404_515410_- 0.823349562 0.823349562 0.823349562 0 elav FBtr0307173 509233 517791 X - 515397 515433 3'utr elav FlyBase G63829.1 AGAAGCCGCCTGCTCTTCCCTTTCCAAAGATTTACCC 23 515412 0.78318523 3 23 194 1 1.397940009 0.12 0.086956522 0.16 23 0 0 25 X:515397-515433 7 elav FBtr0307173 509233 517791 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X - 515397 515489 3'utr elav FlyBase G48116.1 TCAAAACCAAAAGAACTATGGCAATTTCTAGCTAATAAAATGATTGAATGATTGATAGAAGCCGCCTGCTCTTCCCTTTCCAAAGATTTACCC 20 515412 0.980244575 7 20 145 1 1.491361694 0.064516129 0.4 0.612903226 20 0 0 31 X:515397-515489 7 17 6053 FBgn0260400 1799.413333 52.41 80.75 0.009447524 0.324365579 0.210526316 2 2 2 0.01 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 515551 515558 - X_515551_515558_- 0.63113665 0.63113665 0.63113665 0 elav FBtr0307173 509233 517791 X - 515489 515576 3'utr elav FlyBase G63830.1 AAAATTCGCAACAAGAACTCTAGTCAGAAGATGGAAAACAAGAATATTATTATGATGAGGCAGCCGCATATAAGGAGGAATAGTAGAT 76 515558 0.903199156 10 70 284 0.947916667 1.481920138 0.09375 0.223684211 0.385416667 76 3 2 91 X:515489-515576 8 elav FBtr0307173 509233 517791 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X - 515540 515580 3'utr elav FlyBase G48117.2 GAACAAAATTCGCAACAAGAACTCTAGTCAGAAGATGGAAA 43 515558 0.84046978 4 33 131 0.845070423 1.176091259 0.169014085 0.348837209 0.605633803 43 8 3 60 X:515540-515580 8 48 6054 FBgn0260400 1799.413333 52.41 80.75 0.026675361 0.915855753 0.594427245 0 0 0 0.01 dme-miR-282-5p 6mer2-7 GAGGCT X 516919 516924 - X_516919_516924_- 1 1 1 0 elav FBtr0100254|FBtr0307173 516848|509233 517791|517791 X - 516891 516955 3'utr elav FlyBase G63833.1 GCGCATATAATAGGTATATATGCATAACATGGAGGCTGCTACAGTATTACAAGAAACATAAAAAT 390 516926 0.929410632 6 387 2004 0.993670886 2.371990911 0.276371308 0.171794872 0.318565401 390 2 1 471 X:516891-516955 6 elav FBtr0100254|FBtr0307173 516848|509233 517791|517791 GAGGCT 6mer2-7 dme-miR-282-5p X - 516874 516948 3'utr elav FlyBase G48118.1 TAATAGGTATATATGCATAACATGGAGGCTGCTACAGTATTACAAGAAACATAAAAATTAAAACTATATACTTAA 277 516926 0.959733538 5 272 1329 0.979498861 2.33243846 0.277904328 0.375451264 0.605922551 277 8 1 430 X:516874-516948 6 332.5 6055 FBgn0260400 1799.413333 52.41 80.75 0.184782448 6.34420912 4.117647059 2 2 2 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT X 517345 517351 - X_517345_517351_- 0.658999527 0.658999527 0.658999527 0 elav FBtr0114366|FBtr0070091|FBtr0100254|FBtr0307173 517234|517234|516848|509233 517791|517791|517791|517791 X - 517334 517368 3'utr elav FlyBase G63835.1 AAACACACTGTGGCAGTGGCAGCTGTGAAAGGTCA 24 517352 0.886232298 4 23 100 0.9375 1 0.09375 0.25 0.4375 24 0 2 30 X:517334-517368 7 elav FBtr0114366|FBtr0070091|FBtr0100254|FBtr0307173 517234|517234|516848|509233 517791|517791|517791|517791 GGCAGCT 7mer-m8 dme-miR-980-3p X - 517294 517367 3'utr elav FlyBase G48119.1 AACACACTGTGGCAGTGGCAGCTGTGAAAGGTCAAAGGTTGGCACAGTCGATCTAGTCACAAAGCAAAACAAAG 18 517352 0.956633838 6 17 80 0.857142857 1.380211242 0.392857143 0.333333333 0.571428571 18 4 0 24 X:517294-517367 7 17 6056 FBgn0260400 1799.413333 52.41 80.75 0.009447524 0.324365579 0.210526316 1 1 1 0.01 dme-miR-305-5p 7mer-A1 GTACAAA X 5319001 5319007 - X_5319001_5319007_- 0.782911824 0.782911824 0.782911824 0 Rnp4F FBtr0070753|FBtr0112876|FBtr0340477|FBtr0070752 5318926|5318926|5318926|5318926 5319135|5319135|5319135|5319135 X - 5318994 5319037 3'utr Rnp4F FlyBase G64855.1 CAACCTAAACAGACAAGGTTGGAGAACACTGTACAAAGAGAAAA 20 5319008 0.889598479 3 19 55 0.952380952 1 0.285714286 0.05 0.095238095 20 0 1 20 X:5318994-5319037 7 Rnp4F FBtr0070752|FBtr0340477|FBtr0112876|FBtr0070753 5318926|5318926|5318926|5318926 5319135|5319135|5319135|5319135 GTACAAA 7mer-A1 dme-miR-305-5p X - 5318986 5319111 3'utr Rnp4F FlyBase G48868.1 CGGTGCCAGCGGCCATGGTTTAGTTTGTAAGACGAAGACGAAGATTTGGAGCATATATTTTTTTAGATTTAAGGCAACCTAAACAGACAAGGTTGGAGAACACTGTACAAAGAGAAAAACTGTTGT 20 5319008 0.949601018 7 17 86 0.833333333 1.096910013 0.033333333 0.4 0.6 20 4 1 25 X:5318986-5319111 7 15 6057 FBgn0014024 860.4066667 33.54333333 51.90333333 0.017433617 0.447182749 0.28899878 1 1 1 0.01 dme-miR-184-5p 6mer3-8 TGATAA X 5412697 5412702 - X_5412697_5412702_- 1 1 1 0 spoon FBtr0070795 5412384 5414972 X - 5412528 5412738 3'utr spoon FlyBase G64872.1 TCGAATTCATTGTAGATTTGTCACTTGTACAATTGTTGATAAACTGATTAACTGATAACTGATTAACTGACATAGAGATAATGCAAACACGACAGACATGATGTAGAGCACATATTGAAACTAATCTTAGTCGATAGCGAGAAGAGAAGAAGAGACGTGAAGTGAAGAGTCCTCCCTCAAAGATCATCGTAAGTGTGTGGTACTTCTATTT 70 5412705 0.942223787 24 62 473 0.894117647 1.579783597 0.2 0.171428571 0.317647059 70 8 1 76 X:5412528-5412738 6 spoon FBtr0070795 5412384 5414972 TGATAA 6mer3-8 dme-miR-184-5p X - 5412605 5412730 3'utr spoon FlyBase G48882.1 ATTGTAGATTTGTCACTTGTACAATTGTTGATAAACTGATTAACTGATAACTGATTAACTGACATAGAGATAATGCAAACACGACAGACATGATGTAGAGCACATATTGAAACTAATCTTAGTCGA 36 5412705 0.984619078 20 35 280 0.927272727 1.707570176 0.181818182 0.388888889 0.6 36 4 0 51 X:5412605-5412730 6 19.5 6058 FBgn0263987 8368.983333 240.6166667 372.13 0.002330032 0.081041768 0.052401043 3 3 3 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA X 5412925 5412930 - X_5412925_5412930_- 1 1 1 0 spoon FBtr0070795 5412384 5414972 X - 5412823 5412979 3'utr spoon FlyBase G64873.1 TATCCTAAACTAAAACAACTTTTGGAGGGGCTGCCCTCCACACACTGTAGTGCAAATTCGTTTAATGGTTCCTCGTTTTAATAATGTCGTTTAATGCCTTTGGAAATTCGAACTACATTTTAGTCTATGGAACACTAAATACATATTATTGGTTACT 60 5412932 0.983998334 23 59 464 1 1.857332496 0.208333333 0.166666667 0.305555556 60 0 0 72 X:5412823-5412979 6 spoon FBtr0070795 5412384 5414972 GTGCAA 6mer3-8 dme-miR-92b-3p X - 5412901 5412965 3'utr spoon FlyBase G48884.1 ACAACTTTTGGAGGGGCTGCCCTCCACACACTGTAGTGCAAATTCGTTTAATGGTTCCTCGTTTT 14 5412933 0.843143946 5 13 97 0.916666667 1.342422681 0.125 0.428571429 0.666666667 14 2 0 22 X:5412901-5412965 6 20.5 6059 FBgn0263987 8368.983333 240.6166667 372.13 0.002449521 0.085197756 0.055088276 2 3 2.5 0.01 dme-miR-14-3p 6mer3-8 AAGACT X 5413146 5413151 - X_5413146_5413151_- 1 1 1 0 spoon FBtr0070795 5412384 5414972 X - 5413125 5413175 3'utr spoon FlyBase G64875.1 TATCCATCTATTTGGTCAACATGAAAGACTTTGGAGGTGTTTTTTCTTCTT 358 5413144 0.77729696 7 358 2111 1 2.631443769 0.175233645 0.164804469 0.301401869 358 0 0 428 X:5413125-5413175 6 spoon FBtr0070795 5412384 5414972 AAGACT 6mer3-8 dme-miR-14-3p X - 5413124 5413257 3'utr spoon FlyBase G48885.1 AGTCGTCGTCATCGTTCTCATGTCGTCATCGTCATAATTAAATTACTTAGATAATATAATGTACAAGTGATGATCCACACAATATCCATCTATTTGGTCAACATGAAAGACTTTGGAGGTGTTTTTTCTTCTTC 336 5413144 0.826221103 14 329 2020 0.98265896 2.40654018 0.167630058 0.392857143 0.606936416 336 8 1 510 X:5413124-5413257 6 329.5 6060 FBgn0263987 8368.983333 240.6166667 372.13 0.039371568 1.369398074 0.885443259 -7 -7 -7 0.01 dme-miR-304-5p 6mer3-8 TGAGAT X 5414157 5414162 - X_5414157_5414162_- 1 1 1 0 spoon FBtr0070794|FBtr0070795|FBtr0308689|FBtr0308688 5413825|5412384|5413825|5413825 5414972|5414972|5414972|5414972 X - 5414090 5414231 3'utr spoon FlyBase G64879.1 GAAACATAGAAACTCTGGATAAGAATGGAGAAAAACCTGACAAAACTTTAGTTTTATGCTGCTATTTGCTGAGATCTGTAAATATTATATTAGGCCTTTTTAAACAACTGATAATATCTAATCGACGAGTTCATACATTTAC 127 5414165 0.932894368 14 122 1236 0.96 1.681241237 0.3 0.157480315 0.286666667 127 4 2 144 X:5414090-5414231 6 spoon FBtr0308688|FBtr0308689|FBtr0070795|FBtr0070794 5413825|5413825|5412384|5413825 5414972|5414972|5414972|5414972 TGAGAT 6mer3-8 dme-miR-304-5p X - 5414086 5414198 3'utr spoon FlyBase G48887.1 AACCTGACAAAACTTTAGTTTTATGCTGCTATTTGCTGAGATCTGTAAATATTATATTAGGCCTTTTTAAACAACTGATAATATCTAATCGACGAGTTCATACATTTACATGC 105 5414165 0.99071426 13 98 1007 0.935294118 1.298307137 0.376470588 0.438095238 0.652941176 105 4 7 159 X:5414086-5414198 6 103 6061 FBgn0263987 8368.983333 240.6166667 372.13 0.012307349 0.428066773 0.276784994 3 3 3 0.01 dme-miR-283-5p 7mer-A1 GATATTA X 5414380 5414386 - X_5414380_5414386_- 0.782911824 0.782911824 0.782911824 0 spoon FBtr0070794|FBtr0070795|FBtr0308689|FBtr0308688 5413825|5412384|5413825|5413825 5414972|5414972|5414972|5414972 X - 5414349 5414526 3'utr spoon FlyBase G64881.1 AGACAAACGTTTGTTTGTTGACTGTCCAGAATTGGATACCAAAATGGAGGGGGAAGTTAGGGATCAGCTGGGTTATGCGTTTTGTGACCACATGGCAACACATGGGCGGGCGGGCATGCAACGGATCGACTGGAGCTGCAGATATTACTATACTCAGTTTATAAGTAGGCATTACTAA 75 5414401 0.985354692 20 71 352 0.941860465 1.908485019 0.313953488 0.12 0.23255814 75 5 0 81 X:5414349-5414526 7 spoon FBtr0308688|FBtr0308689|FBtr0070795|FBtr0070794 5413825|5413825|5412384|5413825 5414972|5414972|5414972|5414972 GATATTA 7mer-A1 dme-miR-283-5p X - 5414317 5414445 3'utr spoon FlyBase G48888.1 TTGTGACCACATGGCAACACATGGGCGGGCGGGCATGCAACGGATCGACTGGAGCTGCAGATATTACTATACTCAGTTTATAAGTAGGCATTACTAAATAATGTACATAGATTTTATAACGAGAACGAG 66 5414401 0.915897927 14 63 214 0.971698113 2.012837225 0.273584906 0.439393939 0.650943396 66 3 0 103 X:5414317-5414445 7 16.5 6062 FBgn0263987 8368.983333 240.6166667 372.13 0.001971566 0.068573803 0.044339344 15 15 15 0.01 dme-miR-33-5p 6mer2-7 AATGCA X 5426469 5426474 + X_5426469_5426474_+ 1 0.997925823 0.998962911 0.001466681 CG4165 FBtr0070775|FBtr0340461|FBtr0070773|FBtr0340462|FBtr0070772 5426346|5426346|5426346|5426346|5426346 5426906|5426906|5426906|5427219|5426906 X + 5426298 5426490 stop_codon CG4165 FlyBase G58931.1 CGGCGCTGAAGGCGCAGGCCTATCTGCTTTTCTACGAACGCATATACTAGGGATTAGCTCGAGCTTTAAGCGGAACTGAGGATGCGAGGCGTATGGAAGAAAATTTTGGAATCCTATATTTGATACAGACAGAGTGCCGGAGAAAGAGAAGGCAGATACTCACACATGCCAAATGCATTTGGTTTCTCCCACT 23 5426464 0.964470632 14 21 111 0.925925926 1.096910013 0.333333333 0.130434783 0.259259259 23 1 1 25 X:5426298-5426490 6 CG4165 FBtr0340462|FBtr0070772|FBtr0340461|FBtr0070773|FBtr0070775 5426346|5426346|5426346|5426346|5426346 5427219|5426906|5426906|5426906|5426906 AATGCA 6mer2-7 dme-miR-33-5p X + 5426400 5426491 3'utr CG4165 FlyBase G44571.1 ATTTTGGAATCCTATATTTGATACAGACAGAGTGCCGGAGAAAGAGAAGGCAGATACTCACACATGCCAAATGCATTTGGTTTCTCCCACTC 9 5426464 0.972230828 6 9 56 1 1.146128036 0 0.444444444 0.642857143 9 0 0 14 X:5426400-5426491 6 4.5 6063 FBgn0029763 634.33 17.08666667 26.07333333 0.007094099 0.263363246 0.17259013 5 5 5 0.01 dme-miR-999-3p 6mer3-8 AGTTAA X 5426559 5426564 + X_5426559_5426564_+ 1 1 1 0 CG4165 FBtr0070775|FBtr0340461|FBtr0070773|FBtr0340462|FBtr0070772 5426346|5426346|5426346|5426346|5426346 5426906|5426906|5426906|5427219|5426906 X + 5426542 5426615 3'utr CG4165 FlyBase G58932.1 TGGAACAAGCTTTAGTTAGTTAAATGATGCAAAGGAGTAGACACACGCACTCATGTTAAATTGTAGTTCTCAGG 15 5426566 0.986378326 10 11 92 0.722222222 0.812913357 0.333333333 0.133333333 0.277777778 15 4 1 13 X:5426542-5426615 6 CG4165 FBtr0340462|FBtr0070772|FBtr0340461|FBtr0070773|FBtr0070775 5426346|5426346|5426346|5426346|5426346 5427219|5426906|5426906|5426906|5426906 AGTTAA 6mer3-8 dme-miR-999-3p X + 5426536 5426584 3'utr CG4165 FlyBase G44572.1 TTTTTTTGGAACAAGCTTTAGTTAGTTAAATGATGCAAAGGAGTAGACA 6 5426561 0.977929237 6 6 42 1 1 0.1 0.5 0.7 6 0 0 10 X:5426536-5426584 6 7.5 6064 FBgn0029763 634.33 17.08666667 26.07333333 0.011823499 0.438938744 0.287650217 -7 -2 -4.5 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC X 5427079 5427085 + X_5427079_5427085_+ 0.661615645 0.661615645 0.661615645 0 CG4165 FBtr0340462 5426346 5427219 X + 5426979 5427140 3'utr CG4165 FlyBase G58935.1 ACACCTTAATTATATATAATATATATACACTATATTACGGGCCCATATACACATACCGCCCACGTAGATATGTATTTACAAGTTCAGCCGAAGGAGTAAATGTGTTCTTGGACCTACGTAGCGAAAGAATTGGCAACAGGAGAGATTTATACAATAGCGAAG 43 5427086 0.931638187 14 38 242 0.925925926 1.698970004 0.222222222 0.139534884 0.314814815 43 4 0 50 X:5426979-5427140 7 CG4165 FBtr0340462 5426346 5427219 TGTGTTC 7mer-m8 dme-miR-317-3p X + 5427015 5427138 3'utr CG4165 FlyBase G44575.1 ACGGGCCCATATACACATACCGCCCACGTAGATATGTATTTACAAGTTCAGCCGAAGGAGTAAATGTGTTCTTGGACCTACGTAGCGAAAGAATTGGCAACAGGAGAGATTTATACAATAGCGA 24 5427086 0.954461988 11 23 117 0.971428571 1.531478917 0.314285714 0.333333333 0.542857143 24 1 0 34 X:5427015-5427138 7 16.5 6065 FBgn0029763 634.33 17.08666667 26.07333333 0.026011697 0.965665236 0.632830478 -7 -7 -7 0.01 dme-miR-79-3p 6mer2-7 AGCTTT X 5518164 5518169 + X_5518164_5518169_+ 1 1 1 0 CG12730 FBtr0345785|FBtr0070780 5518138|5518138 5518771|5518771 X + 5518050 5518183 stop_codon CG12730 FlyBase G58944.1 GGCCTGACAGCATTTTGCATCAACGGACTGGAGGCCTATGGAAACTATCGGCGCAGTCGCCAGCGGGAGGTGGCCACCCAAACGATATAGACTTGGTTTCAGGTGCACGAACCCAGCTTTTGGTGGCTCTTACT 66 5518170 0.972160869 10 66 414 1 1.929418926 0.105882353 0.212121212 0.388235294 66 0 0 85 X:5518050-5518183 6 CG12730 FBtr0070780|FBtr0345785 5518138|5518138 5518771|5518771 AGCTTT 6mer2-7 dme-miR-79-3p X + 5518141 5518182 3'utr CG12730 FlyBase G44587.1 CTTGGTTTCAGGTGCACGAACCCAGCTTTTGGTGGCTCTTAC 51 5518170 0.81653783 5 51 358 1 1.770852012 0.033898305 0.156862745 0.271186441 51 0 0 59 X:5518141-5518182 6 50 6066 FBgn0029771 260.35 25.59333333 39.07333333 0.192049165 1.953633759 1.279645112 -6 -6 -6 0.01 dme-miR-277-3p 7mer-A1 GCATTTA X 5518321 5518327 + X_5518321_5518327_+ 0.823349562 0.823349562 0.823349562 0 CG12730 FBtr0345785|FBtr0070780 5518138|5518138 5518771|5518771 X + 5518234 5518435 3'utr CG12730 FlyBase G58945.1 GCGAACGAGTATCTGTGTGAGTGCCAGTGCGTGCGCGTGTGTGTGAGTTTGTTTTGAGAGAGCGAGTATCGCTTGCGTTTGCTTGAAGCATTTAAGTCTGAAGTTTGAAATTGTGGCAAGCTTTTGTCGCGGGAACAGTTACCGTATGTGTTATCTAATAGTCGCTAGATATAGGTCAAGAAGTGAAGAAGATAAAGCCAGT 170 5518325 0.987591101 33 157 1397 0.928229665 1.685741739 0.248803828 0.176470588 0.330143541 170 12 3 194 X:5518234-5518435 7 CG12730 FBtr0070780|FBtr0345785 5518138|5518138 5518771|5518771 GCATTTA 7mer-A1 dme-miR-277-3p X + 5518263 5518411 3'utr CG12730 FlyBase G44588.1 CGTGCGCGTGTGTGTGAGTTTGTTTTGAGAGAGCGAGTATCGCTTGCGTTTGCTTGAAGCATTTAAGTCTGAAGTTTGAAATTGTGGCAAGCTTTTGTCGCGGGAACAGTTACCGTATGTGTTATCTAATAGTCGCTAGATATAGGTCA 133 5518325 0.74017343 23 119 1063 0.893401015 1.546542663 0.253807107 0.409090909 0.604060914 132 17 4 176 X:5518263-5518411 7 114 6067 FBgn0029771 260.35 25.59333333 39.07333333 0.437872095 4.45428497 2.917590855 -4 -4 -4 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 5518507 5518513 + X_5518507_5518513_+ 0.823349562 0.823349562 0.823349562 0 CG12730 FBtr0345785|FBtr0070780 5518138|5518138 5518771|5518771 X + 5518452 5518528 3'utr CG12730 FlyBase G58946.1 GTAGATATAATAGCGAACAGAAAGCGAGAGAAAACCACTAACAAGAGAGCAAATTCCAAAGAGATAAGTTGTATTGT 165 5518505 0.899243026 5 162 360 0.976415094 1.713910354 0.028301887 0.2 0.377358491 165 2 3 207 X:5518452-5518528 7 CG12730 FBtr0070780|FBtr0345785 5518138|5518138 5518771|5518771 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X + 5518485 5518523 3'utr CG12730 FlyBase G44589.1 ACCACTAACAAGAGAGCAAATTCCAAAGAGATAAGTTGT 115 5518505 0.807079408 2 114 230 0.994505495 1.956648579 0.038461538 0.330434783 0.576923077 115 0 1 181 X:5518485-5518523 7 138.5 6068 FBgn0029771 260.35 25.59333333 39.07333333 0.531976186 5.411565512 3.54461696 2 2 2 0.01 dme-miR-932-5p 6mer2-7 GAATTG X 5518706 5518711 + X_5518706_5518711_+ 1 1 1 0 CG12730 FBtr0345785|FBtr0070780 5518138|5518138 5518771|5518771 X + 5518667 5518756 3'utr CG12730 FlyBase G58947.1 AAGTAGTTAGTTTTTAGCACAATGCTTTTCATGACCACTGAATTGTTGTATTTATAAACAAATAAATCGTTTGCAATGGAAGAATAAAAC 27 5518710 0.987915578 13 26 228 0.967741935 1.477121255 0 0.148148148 0.258064516 27 1 0 30 X:5518667-5518756 6 CG12730 FBtr0070780|FBtr0345785 5518138|5518138 5518771|5518771 GAATTG 6mer2-7 dme-miR-932-5p X + 5518624 5518731 3'utr CG12730 FlyBase G44591.1 ATTAAGTACATAGTATTTGTGTGTCTCAAGTGAATATACATTGAAGTAGTTAGTTTTTAGCACAATGCTTTTCATGACCACTGAATTGTTGTATTTATAAACAAATAA 16 5518710 0.989759221 11 15 142 1 1.380211242 0.041666667 0.375 0.583333333 16 0 0 24 X:5518624-5518731 6 15 6069 FBgn0029771 260.35 25.59333333 39.07333333 0.057614749 0.586090128 0.383893534 -4 -4 -4 0.01 dme-miR-14-3p 6mer3-8 AAGACT X 5616909 5616914 - X_5616909_5616914_- 1 1 1 0 RhoGAP5A FBtr0070784 5616570 5617024 X - 5616848 5616926 stop_codon RhoGAP5A FlyBase G64900.1 ATCACCCACTGCAAGACTATATTCGCCACATCCTGAGGACGAGGTCATCATACCATGCTGCCCATACCAAGCCAATAAC 15 5616906 0.967702859 4 13 74 0.882352941 1.176091259 0.058823529 0.133333333 0.235294118 15 2 0 15 X:5616848-5616926 6 RhoGAP5A FBtr0070784 5616570 5617024 AAGACT 6mer3-8 dme-miR-14-3p X - 5616849 5616926 stop_codon RhoGAP5A FlyBase G48906.1 ATCACCCACTGCAAGACTATATTCGCCACATCCTGAGGACGAGGTCATCATACCATGCTGCCCATACCAAGCCAATAA 9 5616906 0.94097516 7 9 37 1 1.041392685 0.090909091 0.111111111 0.272727273 9 0 0 11 X:5616849-5616926 6 7 6070 FBgn0029778 273.03 17.13333333 26.07333333 0.025638208 0.408560311 0.268473536 -8 -8 -8 0.01 dme-miR-283-5p 6mer3-8 TGATAT X 5619307 5619312 - X_5619307_5619312_- 1 0.999993215 0.999996608 4.81E-06 Mlc-c FBtr0070783|FBtr0308579 5619134|5619134 5619873|5619873 X - 5619266 5619316 3'utr Mlc-c FlyBase G64903.1 AAGCTGATATGCGTCGGTGGCGTGTGTCCGTATTTAAATGCGCATTTTGAA 10 5619299 0.990161918 3 8 56 0.888888889 0.903089987 0.222222222 0 0 9 1 0 8 X:5619266-5619316 6 Mlc-c FBtr0308579|FBtr0070783 5619134|5619134 5619873|5619873 TGATAT 6mer3-8 dme-miR-283-5p X - 5619259 5619321 3'utr Mlc-c FlyBase G48909.1 AATTAAAGCTGATATGCGTCGGTGGCGTGTGTCCGTATTTAAATGCGCATTTTGAAGTTTTAC 13 5619299 0.891375924 9 12 90 0.925925926 1.397940009 0.185185185 0.615384615 0.814814815 13 2 0 25 X:5619259-5619321 6 7 6071 FBgn0004687 1856.75 182.0733333 278.1533333 0.003770028 0.038446047 0.025165976 -13 -13 -13 0.01 dme-miR-2a-2-5p 6mer2-7 GATGAG X 5619756 5619761 - X_5619756_5619761_- 0.989028894 0.999999918 0.994514406 0.007757668 Mlc-c FBtr0070783|FBtr0308579 5619134|5619134 5619873|5619873 X - 5619715 5619764 3'utr Mlc-c FlyBase G64905.1 ATAGATGAGCCGTTCATTCCGCCAGAAGTTCCAACTCCGTGATTCCAACT 34 5619748 0.958585214 4 32 156 0.975 1.591064607 0.3 0.147058824 0.275 34 1 0 39 X:5619715-5619764 6 Mlc-c FBtr0308579|FBtr0070783 5619134|5619134 5619873|5619873 GATGAG 6mer2-7 dme-miR-2a-2-5p X - 5619711 5619773 3'utr Mlc-c FlyBase G48912.1 AAGCTACACATAGATGAGCCGTTCATTCCGCCAGAAGTTCCAACTCCGTGATTCCAACTTAGC 23 5619748 0.898301992 5 21 110 0.837837838 1.014240439 0.27027027 0.434782609 0.648648649 23 4 2 31 X:5619711-5619773 6 23.5 6072 FBgn0004687 1856.75 182.0733333 278.1533333 0.012656523 0.129068873 0.084485775 -13 -13 -13 0.01 dme-bantam-3p 7mer-m8 TGATCTC X 5685736 5685742 - X_5685736_5685742_- 0.661615243 0.661615243 0.661615243 0 CG3160 FBtr0070847 5685251 5685911 X - 5685665 5685776 3'utr CG3160 FlyBase G64925.1 CAGCGGGAAGTCCAAACTGAGCTCGGCTGGGCGTTGATCTCGATTTGCCCCGATCGCACGTTATATGTATTAATTGTTTTTACGCCTGCTGTCTGCTGCATTCGATTGGCGA 85 5685743 0.981849597 12 84 624 0.989473684 1.973127854 0.347368421 0.082352941 0.178947368 85 1 0 94 X:5685665-5685776 7 CG3160 FBtr0070847 5685251 5685911 TGATCTC 7mer-m8 dme-bantam-3p X - 5685700 5685761 3'utr CG3160 FlyBase G48928.1 ACTGAGCTCGGCTGGGCGTTGATCTCGATTTGCCCCGATCGCACGTTATATGTATTAATTGT 46 5685743 0.97796181 9 43 337 0.925 1.86923172 0.425 0.456521739 0.6875 46 6 0 74 X:5685700-5685761 7 60.5 6073 FBgn0029789 138.8966667 4.523333333 6.876666667 0.435575608 13.37509211 8.797867184 1 1 1 0.01 dme-miR-263a-5p 7mer-m1 TGCCATT X 5692590 5692596 + X_5692590_5692596_+ 0.765586663 0.765586663 0.765586663 0 cv FBtr0340464|FBtr0070804|FBtr0340465 5692571|5692571|5692571 5692773|5693084|5692773 X + 5692546 5692605 stop_codon cv FlyBase G58973.1 GATGGACCCGTGAACAACAACTACTGAGCGCGGTGCGATCAGGATGCCATTCAAGGATTC 9 5692569 0.93365401 6 9 35 1 1.113943352 0.461538462 0.333333333 0.538461538 9 0 0 13 X:5692546-5692605 7 cv FBtr0340465|FBtr0340464|FBtr0070804 5692571|5692571|5692571 5692773|5692773|5693084 TGCCATT 7mer-m1 dme-miR-263a-5p X + 5692544 5692609 stop_codon cv FlyBase G44610.1 TCGATGGACCCGTGAACAACAACTACTGAGCGCGGTGCGATCAGGATGCCATTCAAGGATTCAAGA 7 5692595 0.926413235 4 7 24 1 1 0 0.285714286 0.5 7 0 0 10 X:5692544-5692609 7 4 6074 FBgn0000394 360.2666667 28.40666667 43.42666667 0.011102887 0.140812016 0.092109303 21 -5 8 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA X 5708608 5708615 + X_5708608_5708615_+ 0.500120318 0.500120318 0.500120318 0 CG4096 FBtr0301084|FBtr0301083 5707646|5708513 5708633|5708633 X + 5708581 5708629 3'utr CG4096 FlyBase G58976.1 TTCAGCGAGTAAGCGATCATCCCAGATGTACTTAACTAACTATACGCAC 33 5708607 0.860656772 2 33 225 1 1.612783857 0 0.212121212 0.365853659 33 0 0 41 X:5708581-5708629 8 CG4096 FBtr0301084|FBtr0301083 5707646|5708513 5708633|5708633 GTACTTAA 8mer-A1 dme-miR-252-5p X + 5708582 5708629 3'utr CG4096 FlyBase G44613.1 TCAGCGAGTAAGCGATCATCCCAGATGTACTTAACTAACTATACGCAC 25 5708607 0.868937788 2 25 177 1 1.602059991 0.1 0.48 0.675 25 0 0 40 X:5708582-5708629 8 29 6075 FBgn0029791 34.02 1.16 1.753333333 0.852439741 25 16.53992395 1 1 1 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA X 5719882 5719887 - X_5719882_5719887_- 0.994422442 0.999999999 0.99721122 0.003943959 CG32758 FBtr0340670|FBtr0339525 5719372|5719734 5721627|5721627 X - 5719831 5719911 3'utr CG32758 FlyBase G64932.1 ATGTTTAGTTATAGTCCTATGATAATGTGAATTTACAATTATGTTTATTATTATTACTCTCTCGTTTTCCTTCTTATTTTT 14 5719880 0.993816392 8 13 157 0.941176471 1.204119983 0.294117647 0.142857143 0.294117647 14 1 0 16 X:5719831-5719911 6 CG32758 FBtr0339525|FBtr0340670 5719734|5719372 5721627|5721627 ATGTGA 6mer3-8 dme-miR-1003-3p X - 5719871 5719911 3'utr CG32758 FlyBase G48933.1 ATGTTTAGTTATAGTCCTATGATAATGTGAATTTACAATTA 7 5719889 0.756177915 5 7 84 1 0.954242509 0.333333333 0.285714286 0.444444444 7 0 0 9 X:5719871-5719911 6 9.5 6076 FBgn0052758 1999.443333 76.95666667 118.6333333 0.004751322 0.123446095 0.080078674 -7 2 -2.5 0.01 dme-miR-305-3p 6mer3-8 ATGTGC X 5719935 5719940 - X_5719935_5719940_- 1 1 1 0 CG32758 FBtr0340670|FBtr0339525 5719372|5719734 5721627|5721627 X - 5719924 5719988 3'utr CG32758 FlyBase G64933.1 TTGATTCCATATCTCTTTCGTATCTGTATTGGATTTGTTAATCTCTCGATGTGCGTAGACCACGT 15 5719951 0.737672875 6 12 149 0.8125 1.113943352 0.25 0.066666667 0.125 15 3 0 13 X:5719924-5719988 6 CG32758 FBtr0339525|FBtr0340670 5719734|5719372 5721627|5721627 ATGTGC 6mer3-8 dme-miR-305-3p X - 5719912 5719960 3'utr CG32758 FlyBase G48934.1 TTGGATTTGTTAATCTCTCGATGTGCGTAGACCACGTAATGTATTTATT 14 5719951 0.771289147 8 13 116 0.947368421 1.255272505 0.421052632 0.285714286 0.473684211 14 1 0 18 X:5719912-5719960 6 12 6077 FBgn0052758 1999.443333 76.95666667 118.6333333 0.00600167 0.15593191 0.101152009 11 11 11 0.01 dme-miR-283-5p 8mer-m1 TGATATTT X 5720040 5720047 - X_5720040_5720047_- 0.555455429 0.449018783 0.502237106 0.075262042 CG32758 FBtr0340670|FBtr0339525 5719372|5719734 5721627|5721627 X - 5720011 5720102 3'utr CG32758 FlyBase G64934.1 TTATAGAATGGCATATAGGCATACATTTATCAACGATGCAAGTGACGTCTGCTTGTGATATTTACAATTTACACGATTATTATGATTAATTT 171 5720050 0.848181391 16 160 1547 0.944186047 1.462397998 0.269767442 0.187134503 0.353488372 171 6 6 203 X:5720011-5720102 8 CG32758 FBtr0339525|FBtr0340670 5719734|5719372 5721627|5721627 TGATATTT 8mer-m1 dme-miR-283-5p X - 5720028 5720096 3'utr CG32758 FlyBase G48935.1 AATGGCATATAGGCATACATTTATCAACGATGCAAGTGACGTCTGCTTGTGATATTTACAATTTACACG 129 5720051 0.988979668 11 118 1168 0.878947368 1.377618431 0.273684211 0.317829457 0.536842105 129 17 6 167 X:5720028-5720096 8 141.5 6078 FBgn0052758 1999.443333 76.95666667 118.6333333 0.070769698 1.838697102 1.192750773 3 4 3.5 0.01 dme-miR-1007-3p 8mer-A1 TGAGCTTA X 5739327 5739334 - X_5739327_5739334_- 0.625363359 0.625363359 0.625363359 0 IntS6 FBtr0332400|FBtr0332399|FBtr0070842|FBtr0070841|FBtr0332401 5738661|5738661|5738661|5738661|5738661 5739981|5739981|5739981|5739981|5739981 X - 5739317 5739443 3'utr IntS6 FlyBase G64942.1 AAATTTACTCTTGAGCTTAGGAATAATTTTAAATAGACTTAGATAAATTAAGATAAATCTAAGTGTAGTGTATGTGTATAAAAAAAAAGGGAAAAGTTTAGGAAAAGCTTGAGCTTAATGAGCCCCA 17 5739334 0.979884822 11 17 119 1 1.301029996 0.25 0.176470588 0.3 17 0 0 20 X:5739317-5739443 8 IntS6 FBtr0332401|FBtr0070841|FBtr0070842|FBtr0332399|FBtr0332400 5738661|5738661|5738661|5738661|5738661 5739981|5739981|5739981|5739981|5739981 TGAGCTTA 8mer-A1 dme-miR-1007-3p X - 5739316 5739361 3'utr IntS6 FlyBase G48939.1 AAAAAAGGGAAAAGTTTAGGAAAAGCTTGAGCTTAATGAGCCCCAC 6 5739334 0.966603628 3 6 33 1 0.903089987 0 0.333333333 0.5 6 0 0 8 X:5739316-5739361 8 6.5 6079 FBgn0261383 1360.436667 27.15666667 41.81333333 0.004777878 0.239351909 0.155452806 0 0 0 0.01 dme-miR-11-3p 8mer-m1 CTGTGATG X 5739923 5739930 - X_5739923_5739930_- 0.462274223 0.462274223 0.462274223 0 IntS6 FBtr0332400|FBtr0332399|FBtr0070842|FBtr0070841|FBtr0332401 5738661|5738661|5738661|5738661|5738661 5739981|5739981|5739981|5739981|5739981 X - 5739911 5739958 3'utr IntS6 FlyBase G64946.1 AGCCCGCGGGGTCATCCAATCCATCTGTCTGTGATGTCAACAAAATCG 42 5739931 0.793148294 4 40 308 0.960784314 1.69019608 0.058823529 0.19047619 0.333333333 42 2 0 49 X:5739911-5739958 8 IntS6 FBtr0332401|FBtr0070841|FBtr0070842|FBtr0332399|FBtr0332400 5738661|5738661|5738661|5738661|5738661 5739981|5739981|5739981|5739981|5739981 CTGTGATG 8mer-m1 dme-miR-11-3p X - 5739911 5739963 3'utr IntS6 FlyBase G48942.2 CACTGAGCCCGCGGGGTCATCCAATCCATCTGTCTGTGATGTCAACAAAATCG 24 5739932 0.975410477 5 20 149 0.894736842 1.531478917 0.052631579 0.416666667 0.631578947 24 4 0 34 X:5739911-5739963 8 31 6080 FBgn0261383 1360.436667 27.15666667 41.81333333 0.022786801 1.141524488 0.741390306 1 2 1.5 0.01 dme-miR-988-3p 6mer2-7 CAAGGG X 5760411 5760416 - X_5760411_5760416_- 1 1 1 0 MAPk-Ak2 FBtr0302940|FBtr0070839|FBtr0308577|FBtr0070837 5759906|5759906|5759906|5759906 5760715|5760715|5760715|5760715 X - 5760379 5760447 3'utr MAPk-Ak2 FlyBase G64971.1 TTGTCCCATTATCTATCTATCCATTTCCAGTCAAGGGTTCTTAGGGTATTTTGTAGTCTGAAAAGTGCT 64 5760423 0.779484181 10 61 547 0.971428571 1.832508913 0.014285714 0.078125 0.157142857 64 2 0 68 X:5760379-5760447 6 MAPk-Ak2 FBtr0070837|FBtr0308577|FBtr0070839|FBtr0302940 5759906|5759906|5759906|5759906 5760715|5760715|5760715|5760715 CAAGGG 6mer2-7 dme-miR-988-3p X - 5760376 5760447 3'utr MAPk-Ak2 FlyBase G48962.1 TTGTCCCATTATCTATCTATCCATTTCCAGTCAAGGGTTCTTAGGGTATTTTGTAGTCTGAAAAGTGCTCTT 50 5760423 0.781203743 13 46 434 0.941176471 1.806179974 0.088235294 0.28 0.470588235 50 4 0 64 X:5760376-5760447 6 42 6081 FBgn0013987 1196.673333 75.86 116.6 0.035097298 0.553651463 0.360205832 7 7 7 0.01 dme-bantam-3p 7mer-A1 GATCTCA X 5788990 5788996 + X_5788990_5788996_+ 0.823349562 0.820379931 0.821864747 0.002099895 CG42699 FBtr0302921 5788335 5789576 X + 5788977 5789009 3'utr CG42699 FlyBase G58987.1 AGAAATTCGAAGCGATCTCAACTTGAATATTAT 11 5788999 0.791064138 3 11 58 1 1.146128036 0.357142857 0.181818182 0.357142857 11 0 0 14 X:5788977-5789009 7 CG42699 FBtr0302921 5788335 5789576 GATCTCA 7mer-A1 dme-bantam-3p X + 5788965 5789006 3'utr CG42699 FlyBase G44623.1 ATATCGAAGTACAGAAATTCGAAGCGATCTCAACTTGAATAT 19 5788999 0.964002767 4 19 101 1 1.431363764 0.185185185 0.315789474 0.518518519 19 0 0 27 X:5788965-5789006 7 15 6082 FBgn0261610 150.3333333 4.236666667 6.51 0.099778271 3.540519276 2.304147465 -9 -9 -9 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC X 5873919 5873925 - X_5873919_5873925_- 0.661615645 0.661615645 0.661615645 0 mof FBtr0070829 5873838 5874268 X - 5873868 5874046 3'utr mof FlyBase G64986.1 TTAAGGAGTTTTACGGATAGGCTGTTGTAACTCTTAATGATAGAACCAAATGTCTAATTCGTTTGGCTAATGTTTTTGGAGAGGGAATTTGGAACAACCATTTAAAAATTTTAAAAACTTCTGTGTTCTTGAAATATATATCTTTAACTACTTTATCTCGAAAAACTCTGGACTTGTTA 90 5873918 0.988649972 22 85 805 0.954545455 1.544068044 0.081818182 0.2 0.345454545 90 3 2 105 X:5873868-5874046 7 mof FBtr0070829 5873838 5874268 TGTGTTC 7mer-m8 dme-miR-317-3p X - 5873899 5873973 3'utr mof FlyBase G48975.1 TTTTGGAGAGGGAATTTGGAACAACCATTTAAAAATTTTAAAAACTTCTGTGTTCTTGAAATATATATCTTTAAC 50 5873927 0.799905759 12 46 445 0.892307692 1.763427994 0.015384615 0.26 0.430769231 50 7 0 58 X:5873899-5873973 7 51 6083 FBgn0014340 384.9966667 15.43 23.56333333 0.132468679 3.305249514 2.164379686 -7 2 -2.5 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT X 5877095 5877100 - X_5877095_5877100_- 1 1 1 0 CG3016 FBtr0343537|FBtr0070828 5876998|5876998 5877429|5877429 X - 5877080 5877119 3'utr CG3016 FlyBase G64998.1 AAATTCATGCCGTGCTTTTAGCTGTCTGTATTTAGCAATG 11 5877102 0.647605168 7 11 111 1 1.230448921 0.470588235 0.272727273 0.529411765 11 0 0 17 X:5877080-5877119 6 CG3016 FBtr0343537|FBtr0070828 5876998|5876998 5877429|5877429 AGCTGT 6mer3-8 dme-miR-1008-3p X - 5877092 5877132 3'utr CG3016 FlyBase G48981.1 TTTTAAGAATTCCAAATTCATGCCGTGCTTTTAGCTGTCTG 7 5877102 0.98989689 3 5 52 0.875 0.84509804 0 0.142857143 0.25 7 1 0 7 X:5877092-5877132 6 7.5 6084 FBgn0029819 234.6666667 12.53666667 19.16 0.031960227 0.598245148 0.391440501 2 2 2 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 5877399 5877405 - X_5877399_5877405_- 0.661615511 0.661615511 0.661615511 0 CG3016 FBtr0343537|FBtr0070828 5876998|5876998 5877429|5877429 X - 5877327 5877461 stop_codon CG3016 FlyBase G65001.1 GTGGCCAGCAGAGGCAGCTAAATCTGCGCTAGTCAGGTGTAGGTCGTCGGTATTATTCTAGTCCATACTTTTGATGTGATGAATATGAATATCCGAAACCAAATCCTTTTCGTCGAACGGTGGCCATAGCAAACA 103 5877406 0.802965481 14 101 895 0.976377953 1.792391689 0.196850394 0.174757282 0.330708661 103 2 1 124 X:5877327-5877461 7 CG3016 FBtr0343537|FBtr0070828 5876998|5876998 5877429|5877429 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X - 5877378 5877461 stop_codon CG3016 FlyBase G48985.1 GTGGCCAGCAGAGGCAGCTAAATCTGCGCTAGTCAGGTGTAGGTCGTCGGTATTATTCTAGTCCATACTTTTGATGTGATGAAT 41 5877406 0.988379341 9 41 372 1 1.799340549 0.253968254 0.463414634 0.650793651 41 0 0 63 X:5877378-5877461 7 57 6085 FBgn0029819 234.6666667 12.53666667 19.16 0.242897727 4.546663122 2.974947808 1 1 1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA X 5883108 5883115 + X_5883108_5883115_+ 0.650171355 0.650171355 0.650171355 0 CG16721 FBtr0339948|FBtr0339948|FBtr0339948|FBtr0345313|FBtr0345313|FBtr0345313|FBtr0070821|FBtr0070821|FBtr0070821 5882788|5882788|5882788|5882788|5882788|5882788|5882788|5882788|5882788 5883391|5883391|5883391|5883391|5883391|5883391|5883391|5883391|5883391 X + 5883041 5883212 3'utr CG16721 FlyBase G58998.1 AATCCCCCTGCAAAAAAGCCAGTGGGATCCGAGGCATCTGAAAGGAATCAAAAATGTGCTGGAGCGTCTGTGATAACAAGAATATTCAACACAAAATTCAAATTTTTGGGGGTTAAGAAAAGTGAACTCGTGAATTATGTGTGCTCCTCAATTTTCGTAATGTAAACCCCCT 116 5883107 0.982662307 22 107 773 0.918518519 1.491361694 0.066666667 0.146551724 0.266666667 116 8 3 124 X:5883041-5883212 8 CG16721 FBtr0070821|FBtr0070821|FBtr0070821|FBtr0345313|FBtr0345313|FBtr0345313|FBtr0339948|FBtr0339948|FBtr0339948 5882788|5882788|5882788|5882788|5882788|5882788|5882788|5882788|5882788 5883391|5883391|5883391|5883391|5883391|5883391|5883391|5883391|5883391 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X + 5883083 5883120 3'utr CG16721 FlyBase G44629.1 AGGAATCAAAAATGTGCTGGAGCGTCTGTGATAACAAG 43 5883107 0.719263795 5 39 229 0.919354839 1.755874856 0.080645161 0.325581395 0.532258065 43 5 0 57 X:5883083-5883120 8 61 6086 FBgn0029820 507.81 24.94 37.79666667 0.120123668 2.445870088 1.613898933 1 1 1 0.01 dme-miR-988-3p 6mer3-8 ACAAGG X 5904272 5904277 + X_5904272_5904277_+ 0.999999989 1 0.999999994 0 Act5C FBtr0100663|FBtr0070823|FBtr0100662|FBtr0345894 5903827|5903827|5903827|5903827 5904464|5905227|5904788|5905399 X + 5904245 5904463 3'utr Act5C FlyBase G59005.1 AGCTTACACACACACATTCGCGGCATGACAAGGACATCAAGATAAAGAAGAACTTAAAGAAGATATTTCCCAAAGCGCAAAAAGAACACACACACATTGCAAAACACAAACAACACACTAGCGTTTTGTACAATTCGTCAGCAACCTTATGTATTATTTTTTAATTATGATGTAATTATAAACAAAGTGAAACAAAAATATGAAAACAAAAAGGAAAAT 238 5904270 0.956565088 39 219 1672 0.928057554 1.411619706 0.053956835 0.138655462 0.262589928 238 11 9 258 X:5904245-5904463 6 Act5C FBtr0345894|FBtr0100662|FBtr0070823|FBtr0100663 5903827|5903827|5903827|5903827 5905399|5904788|5905227|5904464 ACAAGG 6mer3-8 dme-miR-988-3p X + 5904248 5904459 3'utr Act5C FlyBase G44637.1 TTACACACACACATTCGCGGCATGACAAGGACATCAAGATAAAGAAGAACTTAAAGAAGATATTTCCCAAAGCGCAAAAAGAACACACACACATTGCAAAACACAAACAACACACTAGCGTTTTGTACAATTCGTCAGCAACCTTATGTATTATTTTTTAATTATGATGTAATTATAAACAAAGTGAAACAAAAATATGAAAACAAAAAGGA 135 5904270 0.980176313 33 123 961 0.921052632 1.544068044 0.036842105 0.311111111 0.510526316 135 11 4 175 X:5904248-5904459 6 38 6087 FBgn0000042 40624.21333 2527.44 3863.87 0.000935403 0.015034976 0.009834699 2 2 2 0.01 dme-miR-999-3p 6mer3-8 AGTTAA X 5910741 5910746 + X_5910741_5910746_+ 1 1 1 0 CG12236 FBtr0070826 5910640 5911789 X + 5910620 5910825 stop_codon CG12236 FlyBase G59018.1 GGCCATCAAGACGGAGAACTGATGCGTCTTCATAAGTCTCGGTCGCCTGCGAGCCGCATCTGGATCTGCAACTGCATCTGGATTGAGATCGATAGGATATACGGATAGGGGAGAGAGATATAGTTAATTACGTCCAGCTTAGCGAGCAGCCAGCAAAACCAATCAACCCAACCAGCCCATTCCCTCGTGTTTCGATCAAAGGCCCC 82 5910740 0.977207903 21 75 494 0.913043478 1.924279286 0.141304348 0.085365854 0.184782609 82 8 0 84 X:5910620-5910825 6 CG12236 FBtr0070826 5910640 5911789 AGTTAA 6mer3-8 dme-miR-999-3p X + 5910684 5910825 3'utr CG12236 FlyBase G44649.1 TCTGCAACTGCATCTGGATTGAGATCGATAGGATATACGGATAGGGGAGAGAGATATAGTTAATTACGTCCAGCTTAGCGAGCAGCCAGCAAAACCAATCAACCCAACCAGCCCATTCCCTCGTGTTTCGATCAAAGGCCCC 43 5910747 0.973826228 11 43 267 1 1.838849091 0.028985507 0.465116279 0.666666667 43 0 0 69 X:5910684-5910825 6 43.5 6088 FBgn0029822 534.9233333 22.61666667 34.62 0.081320065 1.923360354 1.256499133 1 -6 -2.5 0.01 dme-miR-33-5p 7mer-A1 AATGCAA X 5910857 5910863 + X_5910857_5910863_+ 0.782911824 0.782911824 0.782911824 0 CG12236 FBtr0070826 5910640 5911789 X + 5910826 5910876 3'utr CG12236 FlyBase G59019.1 AAAACGAAAACTAGCCAAATTTGTCAACTTAAATGCAAAGCAGATAGGAGT 14 5910855 0.952703307 5 12 81 0.857142857 1.079181246 0.214285714 0 0 14 2 0 12 X:5910826-5910876 7 CG12236 FBtr0070826 5910640 5911789 AATGCAA 7mer-A1 dme-miR-33-5p X + 5910827 5910875 3'utr CG12236 FlyBase G44650.1 AAACGAAAACTAGCCAAATTTGTCAACTTAAATGCAAAGCAGATAGGAG 7 5910855 0.891859222 3 6 35 0.769230769 1 0.076923077 0.428571429 0.692307692 7 3 0 10 X:5910827-5910875 7 8 6089 FBgn0029822 534.9233333 22.61666667 34.62 0.014955414 0.353721444 0.2310803 2 2 2 0.01 dme-miR-252-5p 6mer3-8 GTACTT X 5911063 5911068 + X_5911063_5911068_+ 1 1 1 0 CG12236 FBtr0070826 5910640 5911789 X + 5911005 5911091 3'utr CG12236 FlyBase G59021.1 GTGTCCACGTAATGCGTACATGTACCACTTGTATTTTATAGTCTACCATTTGCTTTAGGTACTTCTTCATTATACAGACGGCAAGTT 16 5911053 0.989165933 13 16 143 1 1.278753601 0.263157895 0.1875 0.315789474 16 0 0 19 X:5911005-5911091 6 CG12236 FBtr0070826 5910640 5911789 GTACTT 6mer3-8 dme-miR-252-5p X + 5911017 5911070 3'utr CG12236 FlyBase G44652.1 TGCGTACATGTACCACTTGTATTTTATAGTCTACCATTTGCTTTAGGTACTTCT 10 5911053 0.931484159 3 10 94 1 1.146128036 0.071428571 0.2 0.428571429 10 0 0 14 X:5911017-5911070 6 7.5 6090 FBgn0029822 534.9233333 22.61666667 34.62 0.014020701 0.331613854 0.216637782 10 10 10 0.01 dme-miR-79-3p 6mer3-8 TAGCTT X 5911212 5911217 + X_5911212_5911217_+ 1 1 1 0 CG12236 FBtr0070826 5910640 5911789 X + 5911155 5911286 3'utr CG12236 FlyBase G59022.1 AAACACACCCAAGATGACAAGAATTTTGGAAGATTTGAGAGCACTTTGGATGCTTAATAGCTTAGATCGAGTGATACTATGTGCAAGAGAACAGAACACAAGGATTTAATTTGATTGTAGAAAACTAATGTT 19 5911200 0.982083294 14 18 136 0.954545455 1.322219295 0.363636364 0.105263158 0.227272727 19 1 0 21 X:5911155-5911286 6 CG12236 FBtr0070826 5910640 5911789 TAGCTT 6mer3-8 dme-miR-79-3p X + 5911181 5911222 3'utr CG12236 FlyBase G44653.1 TGGAAGATTTGAGAGCACTTTGGATGCTTAATAGCTTAGATC 7 5911201 0.983290798 5 7 50 1 1.041392685 0.363636364 0.428571429 0.636363636 7 0 0 11 X:5911181-5911222 6 8 6091 FBgn0029822 534.9233333 22.61666667 34.62 0.014955414 0.353721444 0.2310803 12 11 11.5 0.01 dme-miR-283-5p 8mer-A1 TGATATTA X 5911354 5911361 + X_5911354_5911361_+ 0.592192292 0.592192292 0.592192292 0 CG12236 FBtr0070826 5910640 5911789 X + 5911290 5911360 3'utr CG12236 FlyBase G59023.1 CTTAGCCCATATCGATCACTTTATTTTAGCTCTTAAACAACCTCATATGTATTTTTTGAAACTCTGATATT 16 5911333 0.991304349 9 15 163 0.941176471 0.903089987 0.058823529 0.0625 0.117647059 16 0 1 16 X:5911290-5911360 7 CG12236 FBtr0070826 5910640 5911789 TGATATTA 8mer-A1 dme-miR-283-5p X + 5911307 5911434 3'utr CG12236 FlyBase G44654.1 ACTTTATTTTAGCTCTTAAACAACCTCATATGTATTTTTTGAAACTCTGATATTATTCAGTTTTTGTATATAGAGCTAGGCAACTTAACCTAAATTAAGGTAAACCCAAAAACAAAGTCCCCCCTCCA 17 5911334 0.986087962 11 16 140 1 1.322219295 0.285714286 0.235294118 0.380952381 17 0 0 21 X:5911307-5911434 8 1.5 6092 FBgn0029822 534.9233333 22.61666667 34.62 0.00280414 0.066322771 0.043327556 21 20 20.5 0.01 dme-miR-305-5p 7mer-A1 GTACAAA X 5911537 5911543 + X_5911537_5911543_+ 0.782911824 0.782911824 0.782911824 0 CG12236 FBtr0070826 5910640 5911789 X + 5911463 5911701 3'utr CG12236 FlyBase G59025.1 AGGAAGGAAGCTGTGTACTTTGCTCACAAGCAGAGATCAGGAGAATATGAGAAAATATATATATTACCCCTTGTGTACAAATTTAAATACGATTTAATCCAATTACCCGGCGCGCTTTTGACCATCTGTGTTCAGCATTAGAGCGTTGGCAGTTGACTGTAAATTAGCTAAATTAGTTTTAGTTTAGTTTAAGACACCACAAATTCGATTGGACATAGTTTAGTTATTCGGTGTAACTT 65 5911534 0.981049885 27 65 467 1 1.826074803 0.104477612 0.030769231 0.059701493 65 0 0 67 X:5911463-5911701 7 CG12236 FBtr0070826 5910640 5911789 GTACAAA 7mer-A1 dme-miR-305-5p X + 5911516 5911547 3'utr CG12236 FlyBase G44656.1 AATATATATATTACCCCTTGTGTACAAATTTA 7 5911534 0.783649099 3 7 60 1 1.079181246 0 0.428571429 0.666666667 7 0 0 12 X:5911516-5911547 7 11.5 6093 FBgn0029822 534.9233333 22.61666667 34.62 0.021498408 0.508474576 0.332177932 3 3 3 0.01 dme-miR-1012-3p 6mer3-8 TTGACT X 5911615 5911620 + X_5911615_5911620_+ 1 1 1 0 CG12236 FBtr0070826 5910640 5911789 X + 5911463 5911701 3'utr CG12236 FlyBase G59025.1 AGGAAGGAAGCTGTGTACTTTGCTCACAAGCAGAGATCAGGAGAATATGAGAAAATATATATATTACCCCTTGTGTACAAATTTAAATACGATTTAATCCAATTACCCGGCGCGCTTTTGACCATCTGTGTTCAGCATTAGAGCGTTGGCAGTTGACTGTAAATTAGCTAAATTAGTTTTAGTTTAGTTTAAGACACCACAAATTCGATTGGACATAGTTTAGTTATTCGGTGTAACTT 65 5911616 0.981049885 27 65 467 1 1.826074803 0.104477612 0.030769231 0.059701493 65 0 0 67 X:5911463-5911701 6 CG12236 FBtr0070826 5910640 5911789 TTGACT 6mer3-8 dme-miR-1012-3p X + 5911553 5911636 3'utr CG12236 FlyBase G44657.1 GATTTAATCCAATTACCCGGCGCGCTTTTGACCATCTGTGTTCAGCATTAGAGCGTTGGCAGTTGACTGTAAATTAGCTAAATT 33 5911616 0.943335195 13 31 215 0.916666667 1.041392685 0.0625 0.333333333 0.541666667 33 1 3 44 X:5911553-5911636 6 24 6094 FBgn0029822 534.9233333 22.61666667 34.62 0.044866243 1.061164333 0.693240901 -1 -1 -1 0.01 dme-miR-932-5p 6mer3-8 GGAATT X 5913105 5913110 - X_5913105_5913110_- 0.99993607 1 0.999968035 4.52E-05 CG3011 FBtr0290235|FBtr0070827|FBtr0345317 5913065|5913065|5913065 5913196|5913196|5913196 X - 5913074 5913130 3'utr CG3011 FlyBase G65006.1 GCTTGTTAATATCATAAGTGGGAATTAGTAGTTAAGCCATTAAACGCATTTCAGTTT 17 5913116 0.989521122 6 15 147 0.9 0.954242509 0.3 0.117647059 0.25 17 1 1 18 X:5913074-5913130 6 CG3011 FBtr0070827|FBtr0345317|FBtr0290235 5913065|5913065|5913065 5913196|5913196|5913196 GGAATT 6mer3-8 dme-miR-932-5p X - 5913075 5913148 3'utr CG3011 FlyBase G48988.1 TACATCCTCGAAAAGTCCGCTTGTTAATATCATAAGTGGGAATTAGTAGTTAAGCCATTAAACGCATTTCAGTT 15 5913116 0.980095211 10 15 110 1 1.342422681 0 0.466666667 0.636363636 15 0 0 22 X:5913075-5913148 6 13 6095 FBgn0029823 724.9866667 47.58333333 72.74 0.017931364 0.273204904 0.178718724 6 6 6 0.01 dme-bantam-3p 6mer3-8 TGATCT X 5941596 5941601 + X_5941596_5941601_+ 1 1 1 0 CG3726 FBtr0343051|FBtr0070858 5941403|5941362 5941852|5941664 X + 5941492 5941622 3'utr CG3726 FlyBase G59037.1 AAAGACAGCTAGACGAGGCTAGTTTTGGATCCTGAGTAATGCTTTCCTGAATCCTGAATTCCCACATTAATGTGTTGTTCCCATCGGTGGGTCACAACTATAACTGATCTACACATTTAGGATCTTATTAT 29 5941596 0.745693469 15 28 195 0.96875 1.491361694 0.0625 0.103448276 0.1875 29 1 0 31 X:5941492-5941622 6 CG3726 FBtr0343051|FBtr0070858 5941403|5941362 5941852|5941664 TGATCT 6mer3-8 dme-bantam-3p X + 5941529 5941623 3'utr CG3726 FlyBase G44662.1 AATGCTTTCCTGAATCCTGAATTCCCACATTAATGTGTTGTTCCCATCGGTGGGTCACAACTATAACTGATCTACACATTTAGGATCTTATTATT 16 5941598 0.985706042 8 14 126 0.888888889 1.204119983 0.111111111 0.125 0.222222222 16 2 0 16 X:5941529-5941623 6 8.5 6096 FBgn0029824 462.5733333 18.42 28.35333333 0.018375465 0.46145494 0.299788385 0 -2 -1 0.01 dme-miR-1006-3p 6mer2-7 GAATTT X 5941801 5941806 + X_5941801_5941806_+ 0.852897894 1 0.926448947 0.104016892 CG3726 FBtr0343051 5941403 5941852 X + 5941746 5941850 3'utr CG3726 FlyBase G59038.2 CAACACCATAAACTATGGAATCTAGTTAATCGATAAAATAACACGGAAGTGAAGTGAATTTTTTGATAAGCTAACGAAAAGGAACACAAACAATATGTATTACAT 17 5941805 0.981763357 6 16 111 0.95 0.977723605 0.15 0.117647059 0.25 17 0 1 19 X:5941746-5941850 6 CG3726 FBtr0343051 5941403 5941852 GAATTT 6mer2-7 dme-miR-1006-3p X + 5941756 5941808 3'utr CG3726 FlyBase G44664.1 AACTATGGAATCTAGTTAATCGATAAAATAACACGGAAGTGAAGTGAATTTTT 11 5941804 0.967105986 4 11 61 1 1.176091259 0.133333333 0.363636364 0.533333333 11 0 0 15 X:5941756-5941808 6 10.5 6097 FBgn0029824 462.5733333 18.42 28.35333333 0.022699104 0.570032573 0.370326828 -4 -3 -3.5 0.01 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA X 5944411 5944418 + X_5944411_5944418_+ 0.625364009 0.625348781 0.625356395 1.07E-05 CG12728 FBtr0343052 5944386 5945250 X + 5944260 5944448 stop_codon CG12728 FlyBase G59047.1 AGTCCGATCAGAATTGGGATTTAATTCTTCGAACTGTGCTGGAAGATATCAAAGCCGTACTGATTTACTCAACTGAACGCATCGAAAAAGCGATCCAGAGCTATATCAATAAGTTAGCGCAAAAATAATTTGGAAACGATCTCATTCTAAATGGTGCTACAAGCAAAACTTCACACTTAGTACATACGT 213 5944410 0.982954048 25 191 1452 0.911290323 1.655138435 0.177419355 0.14084507 0.262096774 213 18 4 226 X:5944260-5944448 8 CG12728 FBtr0070859|FBtr0343052 5944386|5944386 5944622|5945250 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" X + 5944287 5944441 stop_codon CG12728 FlyBase G44671.1 TTCGAACTGTGCTGGAAGATATCAAAGCCGTACTGATTTACTCAACTGAACGCATCGAAAAAGCGATCCAGAGCTATATCAATAAGTTAGCGCAAAAATAATTTGGAAACGATCTCATTCTAAATGGTGCTACAAGCAAAACTTCACACTTAGTA 125 5944410 0.855694508 20 113 848 0.920903955 1.367089564 0.169491525 0.304 0.508474576 125 8 6 163 X:5944287-5944441 8 76 6098 FBgn0029825 316.1666667 16.35666667 25.15 0.240379547 4.646423477 3.021868787 1 1 1 0.01 dme-miR-184-5p 6mer3-8 TGATAA X 5944674 5944679 + X_5944674_5944679_+ 1 1 1 0 CG12728 FBtr0343052 5944386 5945250 X + 5944654 5944764 3'utr CG12728 FlyBase G59049.1 TGACAAACACAAATCCTCAGTGATAAAAGGATAAAGACATGATTCCATTTGTTGATTAGGTATTCGTACCTAAGTCCATCGAACAGCAATCAAATGAAACAAAACAATGTA 17 5944670 0.997549383 7 15 84 0.888888889 1.204119983 0.222222222 0.058823529 0.111111111 17 2 0 16 X:5944654-5944764 6 CG12728 FBtr0343052 5944386 5945250 TGATAA 6mer3-8 dme-miR-184-5p X + 5944662 5944690 3'utr CG12728 FlyBase G44674.1 ACAAATCCTCAGTGATAAAAGGATAAAGA 7 5944670 0.691150553 3 6 26 0.9 0.653212514 0.3 0.428571429 0.6 7 0 1 9 X:5944662-5944690 6 8 6099 FBgn0029825 316.1666667 16.35666667 25.15 0.02530311 0.489097208 0.318091451 4 4 4 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 5944791 5944796 + X_5944791_5944796_+ 1 1 1 0 CG12728 FBtr0343052 5944386 5945250 X + 5944766 5944823 3'utr CG12728 FlyBase G59050.1 AGTGTTGTAGATTTTAAAACGTCTTACCAAAACACCCTCAGTACACAAACAAGTTGAG 6 5944789 0.948365264 3 4 29 0.857142857 0.77815125 0.285714286 0.166666667 0.285714286 6 1 0 6 X:5944766-5944823 6 CG12728 FBtr0343052 5944386 5945250 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 5944758 5944806 3'utr CG12728 FlyBase G44675.1 CAATGTATAGTGTTGTAGATTTTAAAACGTCTTACCAAAACACCCTCAG 10 5944790 0.916403571 4 10 40 1 1.204119983 0.125 0.6 0.75 10 0 0 16 X:5944758-5944806 6 6.5 6100 FBgn0029825 316.1666667 16.35666667 25.15 0.020558777 0.397391482 0.258449304 2 1 1.5 0.01 dme-miR-190-5p 7mer-m8 ACATATC X 5944866 5944872 + X_5944866_5944872_+ 0.674514898 0.674514898 0.674514898 0 CG12728 FBtr0343052 5944386 5945250 X + 5944841 5944874 3'utr CG12728 FlyBase G59051.1 AGCAACTAACTCCTATCTCTATGGAACATATCGA 7 5944861 0.809044662 3 6 39 0.857142857 0.77815125 0.285714286 0 0 7 1 0 6 X:5944841-5944874 7 CG12728 FBtr0343052 5944386 5945250 ACATATC 7mer-m8 dme-miR-190-5p X + 5944829 5944868 3'utr CG12728 FlyBase G44676.1 TTGCATAGAAGCAGCAACTAACTCCTATCTCTATGGAACA 5 5944857 0.978181009 2 4 29 0.875 0.84509804 0 0.4 0.625 5 1 0 7 X:5944829-5944868 3 3.5 6101 FBgn0029825 316.1666667 16.35666667 25.15 0.011070111 0.213980029 0.13916501 5 9 7 0.01 dme-miR-33-5p 7mer-m8 CAATGCA X 5944970 5944976 + X_5944970_5944976_+ 0.67447387 0.674515173 0.674494522 2.92E-05 CG12728 FBtr0343052 5944386 5945250 X + 5944927 5944995 3'utr CG12728 FlyBase G59052.1 CGACCGATTAGTCAGGGCTTTCCAGCGGTTATAACCTCCTGATCAATGCATTTTATGTTAAATATTTTT 55 5944969 0.809215622 11 52 463 0.940298507 1.322219295 0.014925373 0.163636364 0.313432836 55 2 2 63 X:5944927-5944995 7 CG12728 FBtr0343052 5944386 5945250 CAATGCA 7mer-m8 dme-miR-33-5p X + 5944935 5944990 3'utr CG12728 FlyBase G44677.1 TAGTCAGGGCTTTCCAGCGGTTATAACCTCCTGATCAATGCATTTTATGTTAAATA 38 5944969 0.820869976 8 36 286 0.953125 1.183269844 0.03125 0.447368421 0.671875 38 0 3 61 X:5944935-5944990 7 43 6102 FBgn0029825 316.1666667 16.35666667 25.15 0.136004217 2.628897493 1.709741551 1 1 1 0.01 dme-bantam-3p 6mer3-8 TGATCT X 5945238 5945243 + X_5945238_5945243_+ 1 1 1 0 CG12728 FBtr0343052 5944386 5945250 X + 5945219 5945256 3'utr CG12728 FlyBase G59054.1 GGTGGGTCACAACTATAACTGATCTACACATTTAGGAT 6 5945237 0.965830062 4 6 33 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 X:5945219-5945256 6 CG12728 FBtr0343052 5944386 5945250 TGATCT 6mer3-8 dme-bantam-3p X + 5945202 5945247 3'utr CG12728 FlyBase G44679.1 AATGTGTTGTTCCCATCGGTGGGTCACAACTATAACTGATCTACAC 11 5945239 0.721349094 5 10 63 0.933333333 0.84509804 0 0.363636364 0.533333333 11 0 1 14 X:5945202-5945247 6 7 6103 FBgn0029825 316.1666667 16.35666667 25.15 0.022140221 0.427960057 0.27833002 1 -1 0 0.01 dme-miR-988-3p 6mer3-8 ACAAGG X 5947522 5947527 + X_5947522_5947527_+ 1 1 1 0 CG32756 FBtr0070860|FBtr0343295 5947414|5947414 5947851|5948353 X + 5947487 5947544 3'utr CG32756 FlyBase G59066.1 TTTTTTTTTTGAGATAAAAACAAATCCTCAGTGATACAAGGATAAAAGACATGATTCC 20 5947520 0.973748021 7 16 80 0.826086957 0.977723605 0.217391304 0.15 0.260869565 20 3 1 19 X:5947487-5947544 6 CG32756 FBtr0343295|FBtr0070860 5947414|5947414 5948353|5947851 ACAAGG 6mer3-8 dme-miR-988-3p X + 5947502 5947560 3'utr CG32756 FlyBase G44688.1 AAAAACAAATCCTCAGTGATACAAGGATAAAAGACATGATTCCATTTGTTGATTAGGTA 11 5947521 0.949583396 5 9 56 0.947368421 1.255272505 0.315789474 0.454545455 0.684210526 11 1 0 18 X:5947502-5947560 6 13.5 6104 FBgn0052756 250.4866667 13.61 20.71333333 0.053895084 0.991917708 0.651754104 2 1 1.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 5947639 5947644 + X_5947639_5947644_+ 1 1 1 0 CG32756 FBtr0070860|FBtr0343295 5947414|5947414 5947851|5948353 X + 5947590 5947663 3'utr CG32756 FlyBase G59067.1 AAATGAAACAAAACAATGTATAGTGTTGTAGATTTTAAAACGACATCTTACCAAAACACCCTCAGTACACAAAC 36 5947638 0.952006227 9 34 152 0.974358974 1.579783597 0.051282051 0.083333333 0.153846154 36 1 0 38 X:5947590-5947663 6 CG32756 FBtr0343295|FBtr0070860 5947414|5947414 5948353|5947851 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 5947627 5947663 3'utr CG32756 FlyBase G44689.1 AAACGACATCTTACCAAAACACCCTCAGTACACAAAC 21 5947638 0.702096727 3 19 63 0.942857143 1.51851394 0.028571429 0.476190476 0.685714286 21 2 0 33 X:5947627-5947663 6 25 6105 FBgn0052756 250.4866667 13.61 20.71333333 0.099805712 1.836884644 1.206952044 1 1 1 0.01 dme-miR-283-5p 8mer-A1 TGATATTA X 5947724 5947731 + X_5947724_5947731_+ 0.592192292 0.592192292 0.592192292 0 CG32756 FBtr0070860|FBtr0343295 5947414|5947414 5947851|5948353 X + 5947686 5947748 3'utr CG32756 FlyBase G59068.1 AGCAGCAACTAACTCCTATCTCTATGGAACATATCGACTGATATTAAAATGCGTCCGATTAGT 152 5947727 0.693801718 11 145 926 0.960591133 2.290034611 0.009852217 0.276315789 0.458128079 152 8 0 195 X:5947686-5947748 8 CG32756 FBtr0343295|FBtr0070860 5947414|5947414 5948353|5947851 TGATATTA 8mer-A1 dme-miR-283-5p X + 5947695 5947791 3'utr CG32756 FlyBase G44690.1 TAACTCCTATCTCTATGGAACATATCGACTGATATTAAAATGCGTCCGATTAGTCACGGCTTTCCAACGGTTATAGCCTCCTGATCAATGCATTTTA 131 5947727 0.616512411 12 125 830 0.967032967 1.944482672 0.027472527 0.290076336 0.489010989 131 5 1 176 X:5947695-5947791 8 135 6106 FBgn0052756 250.4866667 13.61 20.71333333 0.538950842 9.919177076 6.517541036 -3 -3 -3 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT X 6008306 6008311 - X_6008306_6008311_- 1 1 1 0 mab-21 FBtr0070890 6008181 6008807 X - 6008252 6008353 3'utr mab-21 FlyBase G65023.1 CCATTTGCTATTAGCAAAGTGCAGAGCAAAATTAGCTAAATTAGCTGTAAGTCCTAATGAAACTGAGACAGCCGAGTGAAGGAATATTTCCCCGTCGGTCCT 767 6008295 0.807548448 17 741 3037 0.964989059 2.246498581 0.031728665 0.162972621 0.297592998 767 28 4 882 X:6008252-6008353 6 mab-21 FBtr0070890 6008181 6008807 AGCTGT 6mer3-8 dme-miR-1008-3p X - 6008251 6008343 3'utr mab-21 FlyBase G49002.1 TTAGCAAAGTGCAGAGCAAAATTAGCTAAATTAGCTGTAAGTCCTAATGAAACTGAGACAGCCGAGTGAAGGAATATTTCCCCGTCGGTCCTA 471 6008295 0.835135542 13 446 1693 0.955072464 1.818885415 0.034782609 0.350318471 0.556521739 471 22 9 659 X:6008251-6008343 6 177.5 6107 FBgn0029003 3 0.19 0.303333333 59.16666667 934.2105263 585.1648352 -16 -16 -16 0.01 dme-miR-1003-3p 7mer-A1 TGTGAGA X 6008577 6008583 - X_6008577_6008583_- 0.823349562 0.823349562 0.823349562 0 mab-21 FBtr0070890 6008181 6008807 X - 6008374 6008654 3'utr mab-21 FlyBase G65024.1 TCTACAACTAAAGACAAAGGATCGCAAGGATCAAGGGCGCTGGGAGGGTCGAAGCTGGAGAAGGAGAAATGTGTGAGAAAGATAGAGAGAAAGCAGTGAAATTGTAACCCAAATACTATTTGATATTTCGCTAGATCGTAACTTAAGTTTAGGTGCTTTCGAAAAGTATACGCCGCTTACAGAGTTTCCTATAATTAGAGCATACTTAGTGTTATCCATTTAGATCGTCATCGTCGCAAAACGCACAAAAGTTACCAACTAGTTACATTTGTATGTACGAC 1232 6008585 0.955179246 64 1147 6608 0.932238193 2.134177108 0.248459959 0.151785714 0.284736482 1232 90 9 1362 X:6008374-6008654 7 mab-21 FBtr0070890 6008181 6008807 TGTGAGA 7mer-A1 dme-miR-1003-3p X - 6008360 6008665 3'utr mab-21 FlyBase G49003.1 GATTTTTTTTTTCTACAACTAAAGACAAAGGATCGCAAGGATCAAGGGCGCTGGGAGGGTCGAAGCTGGAGAAGGAGAAATGTGTGAGAAAGATAGAGAGAAAGCAGTGAAATTGTAACCCAAATACTATTTGATATTTCGCTAGATCGTAACTTAAGTTTAGGTGCTTTCGAAAAGTATACGCCGCTTACAGAGTTTCCTATAATTAGAGCATACTTAGTGTTATCCATTTAGATCGTCATCGTCGCAAAACGCACAAAAGTTACCAACTAGTTACATTTGTATGTACGACATTTTTTTTTTTTT 825 6008585 0.966336813 55 753 4017 0.915213946 1.916453949 0.270206022 0.375757576 0.591917591 825 94 13 1155 X:6008360-6008665 7 536.5 6108 FBgn0029003 3 0.19 0.303333333 178.8333333 2823.684211 1768.681319 2 2 2 0.01 dme-miR-14-3p 8mer-A1 AAGACTGA X 6035871 6035878 - X_6035871_6035878_- 0.643565469 0.643565469 0.643565469 0 rux FBtr0307288|FBtr0070889 6035751|6035751 6035992|6035992 X - 6035849 6035893 3'utr rux FlyBase G65031.1 CGTAATTATTTGAACAAGACTGATTGCACCCGCTTTGGTTCCGCT 68 6035870 0.719913162 9 60 454 0.897435897 1.544068044 0.012820513 0.117647059 0.230769231 68 7 1 70 X:6035849-6035893 8 rux FBtr0307288|FBtr0070889 6035751|6035751 6035992|6035992 AAGACTGA 8mer-A1 dme-miR-14-3p X - 6035850 6035893 3'utr rux FlyBase G49011.1 CGTAATTATTTGAACAAGACTGATTGCACCCGCTTTGGTTCCGC 66 6035870 0.689173382 6 57 431 0.852941176 1.939519253 0.068627451 0.46969697 0.656862745 66 15 0 87 X:6035850-6035893 8 66.5 6109 FBgn0003302 80.70666667 7.456666667 11.36 0.823971584 8.91819401 5.853873239 -8 -8 -8 0.01 dme-miR-7-5p 6mer3-8 GTCTTC X 6038989 6038994 + X_6038989_6038994_+ 0.999964109 1 0.999982054 2.54E-05 CG5941 FBtr0070867 6038956 6039576 X + 6038956 6039049 stop_codon CG5941 FlyBase G59072.1 AGGCGAAATAGGAATCTGCACTTGCACTTTTTAGTCTTCTATGTCATGAGAGCAAAGAATGGTTTTTGATATACGCAACTGAGTCCTGATTATT 39 6038992 0.981763553 14 37 288 0.956521739 1.643452676 0.239130435 0.179487179 0.304347826 39 2 0 44 X:6038956-6039049 6 CG5941 FBtr0305344|FBtr0070867 6038956|6038956 6039129|6039576 GTCTTC 6mer3-8 dme-miR-7-5p X + 6038962 6039021 3'utr CG5941 FlyBase G44693.1 AATAGGAATCTGCACTTGCACTTTTTAGTCTTCTATGTCATGAGAGCAAAGAATGGTTTT 13 6038992 0.985097936 6 11 95 0.833333333 1.301029996 0.041666667 0.461538462 0.708333333 13 4 0 20 X:6038962-6039021 6 12.5 6110 FBgn0029833 211.4866667 25.52666667 38.53 0.059105381 0.489683991 0.324422528 -3 -3 -3 0.01 dme-miR-986-5p 6mer3-8 ATTCGA X 6083461 6083466 - X_6083461_6083466_- 1 1 1 0 raptor FBtr0345895|FBtr0332964 6082632|6082657 6084600|6084600 X - 6083389 6083485 3'utr raptor FlyBase G65040.1 AATGTTAGGAATGGAAAAGATTCGAAGGAACTGGAGTTCAACAATGATCAGATTAGGATTAGGACTAGTTTTGTAAGTGATGAGCGGCGGAGAGCGG 86 6083441 0.974462355 8 83 538 0.960784314 1.991226076 0.254901961 0.151162791 0.284313725 86 4 0 98 X:6083389-6083485 6 raptor FBtr0345895|FBtr0332964 6082632|6082657 6084600|6084600 ATTCGA 6mer3-8 dme-miR-986-5p X - 6083395 6083500 3'utr raptor FlyBase G49014.1 AACTGATATAGAGATAATGTTAGGAATGGAAAAGATTCGAAGGAACTGGAGTTCAACAATGATCAGATTAGGATTAGGACTAGTTTTGTAAGTGATGAGCGGCGGA 61 6083454 0.916107766 13 58 373 0.975609756 1.903089987 0.329268293 0.31147541 0.487804878 61 2 0 80 X:6083395-6083500 6 24 6111 FBgn0029840 503.1666667 8.506666667 12.99666667 0.047697913 2.821316614 1.84662734 -25 -12 -18.5 0.01 dme-bantam-3p 6mer2-7 GATCTC X 6083706 6083711 - X_6083706_6083711_- 1 1 1 0 raptor FBtr0345895|FBtr0332964 6082632|6082657 6084600|6084600 X - 6083681 6083735 5'utr raptor FlyBase G65041.1 CTGCCCGGCTGCCCGCAGGACAAGGATCTCTGTCCGCTGGCCACGCTGCGTCGGA 20 6083705 0.664441986 3 20 81 1 1.380211242 0.208333333 0.2 0.333333333 20 0 0 24 X:6083681-6083735 6 raptor FBtr0345895|FBtr0332964 6082632|6082657 6084600|6084600 GATCTC 6mer2-7 dme-bantam-3p X - 6083646 6083731 5'utr raptor FlyBase G49016.1 CCGGCTGCCCGCAGGACAAGGATCTCTGTCCGCTGGCCACGCTGCGTCGGATTTACGCCAATAGCGTGGACCACTGCGACCGCGAG 22 6083705 0.953140839 4 21 89 1 1.505149978 0.1875 0.380952381 0.59375 21 0 0 32 X:6083646-6083731 6 18 6112 FBgn0029840 503.1666667 8.506666667 12.99666667 0.035773435 2.115987461 1.384970505 -6 -6 -6 0.01 dme-miR-79-3p 6mer3-8 TAGCTT X 610727 610732 - X_610727_610732_- 1 0.999999998 0.999999999 0 CG13366 FBtr0339433|FBtr0110791|FBtr0339431|FBtr0339432|FBtr0070161|FBtr0339430 610547|610547|610547|610547|610547|610547 611251|611251|611251|611251|611251|611251 X - 610664 610771 3'utr CG13366 FlyBase G63849.1 ATTTTAATGCGTAAATCGACGATTGAGCTGGACGATGATTAGCTTGACGACGAAACATTACTATACAGATAATAAGGAGATGGACTAGCTTTAGCGTATATATAACTA 28 610733 0.970531813 8 27 161 1 1.477121255 0.333333333 0.071428571 0.133333333 28 0 0 30 X:610664-610771 6 CG13366 FBtr0110791|FBtr0339433|FBtr0339430|FBtr0070161|FBtr0339432|FBtr0339431 610547|610547|610547|610547|610547|610547 611251|611251|611251|611251|611251|611251 TAGCTT 6mer3-8 dme-miR-79-3p X - 610715 610746 3'utr CG13366 FlyBase G48126.1 AGCTGGACGATGATTAGCTTGACGACGAAACA 5 610733 0.942176047 3 5 23 1 0.84509804 0.571428571 0.4 0.571428571 5 0 0 7 X:610715-610746 6 11 6113 FBgn0025633 323.6666667 8.64 13.25333333 0.033985582 1.273148148 0.829979879 1 1 1 0.01 dme-miR-317-5p 7mer-A1 TATCCCA X 610836 610842 - X_610836_610842_- 0.823349562 0.823349562 0.823349562 0 CG13366 FBtr0339433|FBtr0110791|FBtr0339431|FBtr0339432|FBtr0070161|FBtr0339430 610547|610547|610547|610547|610547|610547 611251|611251|611251|611251|611251|611251 X - 610800 610855 3'utr CG13366 FlyBase G63850.1 GGACAACGATGACTATCCCAGCCTGTTCCCACTGTACATGGGTGTTTATATAGGTG 16 610831 0.964751918 5 15 82 0.95 1.278753601 0.2 0.1875 0.35 16 1 0 19 X:610800-610855 7 CG13366 FBtr0110791|FBtr0339433|FBtr0339430|FBtr0070161|FBtr0339432|FBtr0339431 610547|610547|610547|610547|610547|610547 611251|611251|611251|611251|611251|611251 TATCCCA 7mer-A1 dme-miR-317-5p X - 610812 610857 3'utr CG13366 FlyBase G48127.1 AAGGACAACGATGACTATCCCAGCCTGTTCCCACTGTACATGGGTG 10 610830 0.911721357 3 9 47 1 1.255272505 0.222222222 0.5 0.722222222 10 0 0 18 X:610812-610857 7 11 6114 FBgn0025633 323.6666667 8.64 13.25333333 0.033985582 1.273148148 0.829979879 -11 -12 -11.5 0.01 dme-miR-190-5p 6mer2-7 CATATC X 611021 611026 - X_611021_611026_- 0.999999999 1 1 0 CG13366 FBtr0339433|FBtr0110791|FBtr0339431|FBtr0339432|FBtr0070161|FBtr0339430 610547|610547|610547|610547|610547|610547 611251|611251|611251|611251|611251|611251 X - 610953 611093 3'utr CG13366 FlyBase G63851.1 TCTCCAATTCCTCTAGCTTGTACACTTTTTTCCTGTAAAGCCTCTTCTGCTTTAGTGCGTCTGATTCCATATCCTTGCCCATGTATAATGGTCGTCCGATGCAGCGCCCCATATTCAGACATCGCTACTTTTAAATATCAT 22 611040 0.989923359 14 19 196 0.923076923 1.079181246 0.153846154 0.181818182 0.307692308 22 1 1 24 X:610953-611093 6 CG13366 FBtr0110791|FBtr0339433|FBtr0339430|FBtr0070161|FBtr0339432|FBtr0339431 610547|610547|610547|610547|610547|610547 611251|611251|611251|611251|611251|611251 CATATC 6mer2-7 dme-miR-190-5p X - 610981 611067 3'utr CG13366 FlyBase G48128.1 TTTTTCCTGTAAAGCCTCTTCTGCTTTAGTGCGTCTGATTCCATATCCTTGCCCATGTATAATGGTCGTCCGATGCAGCGCCCCATA 12 611038 0.986741672 7 11 111 0.9375 1.176091259 0 0.333333333 0.5 12 1 0 15 X:610981-611067 6 6.5 6115 FBgn0025633 323.6666667 8.64 13.25333333 0.020082389 0.752314815 0.490442656 14 12 13 0.01 dme-miR-1007-3p 6mer3-8 TGAGCT X 611210 611215 - X_611210_611215_- 0.999999999 1 1 0 CG13366 FBtr0339433|FBtr0110791|FBtr0339431|FBtr0339432|FBtr0070161|FBtr0339430 610547|610547|610547|610547|610547|610547 611251|611251|611251|611251|611251|611251 X - 611180 611282 stop_codon CG13366 FlyBase G63852.1 GACGGCAGTCTACAAATACTTTGAGACCTAGACGAGGGAATTTAAGGACCATCTGCTGCCCTCCACTTGAGCTCTTTTGTGCAGTATTCGTGGGGTTCCCTTT 17 611226 0.97786002 7 16 108 0.944444444 0.929418926 0.333333333 0.058823529 0.111111111 17 0 1 17 X:611180-611282 6 CG13366 FBtr0110791|FBtr0339433|FBtr0339430|FBtr0070161|FBtr0339432|FBtr0339431 610547|610547|610547|610547|610547|610547 611251|611251|611251|611251|611251|611251 TGAGCT 6mer3-8 dme-miR-1007-3p X - 611202 611265 stop_codon CG13366 FlyBase G48129.1 ACTTTGAGACCTAGACGAGGGAATTTAAGGACCATCTGCTGCCCTCCACTTGAGCTCTTTTGTG 11 611226 0.934082014 7 10 65 0.928571429 1.113943352 0 0.181818182 0.357142857 11 1 0 13 X:611202-611265 6 8 6116 FBgn0025633 323.6666667 8.64 13.25333333 0.024716787 0.925925926 0.60362173 11 11 11 0.01 dme-miR-8-3p 7mer-A1 AGTATTA X 6223122 6223128 - X_6223122_6223128_- 0.823349562 0.823349562 0.823349562 0 sqh FBtr0339502|FBtr0339503|FBtr0070877|FBtr0339504|FBtr0345294 6223059|6223059|6223059|6223059|6223059 6223406|6223406|6223406|6223406|6223406 X - 6223103 6223220 3'utr sqh FlyBase G65056.2 AGTAGCCAACACCAGCGATTGTTATGTACGACAGTGTAGTGTGTGAGATGTTGGTGCCAGATAACACGATTTCCCGAAAAACTCCTTTCATAAGTATTAACTCATTGAATATACATAT 78 6223130 0.762012548 24 73 558 0.955555556 1.934498451 0.088888889 0.128205128 0.244444444 78 4 0 86 X:6223103-6223220 7 sqh FBtr0345294|FBtr0070877|FBtr0339504|FBtr0339502|FBtr0339503 6223059|6223059|6223059|6223059|6223059 6223406|6223406|6223406|6223406|6223406 AGTATTA 7mer-A1 dme-miR-8-3p X - 6223068 6223188 3'utr sqh FlyBase G49023.1 AGTGTAGTGTGTGAGATGTTGGTGCCAGATAACACGATTTCCCGAAAAACTCCTTTCATAAGTATTAACTCATTGAATATACATATATATTACCTATATACAAATACATACTTATACAAGA 48 6223130 0.985277353 16 44 360 0.942857143 1.51851394 0.185714286 0.291666667 0.514285714 48 3 1 66 X:6223068-6223188 7 38 6117 FBgn0003514 2178.836667 260.73 395.3566667 0.0174405 0.14574464 0.096115744 2 2 2 0.01 dme-miR-252-5p 7mer-m8 GTACTTA X 6223245 6223251 - X_6223245_6223251_- 0.588299916 0.588299917 0.588299916 0 sqh FBtr0339502|FBtr0339503|FBtr0070877|FBtr0339504|FBtr0345294 6223059|6223059|6223059|6223059|6223059 6223406|6223406|6223406|6223406|6223406 X - 6223232 6223290 3'utr sqh FlyBase G65057.1 TGGTTTCGCGCCTTCTGTTCTTTGATTCCTGATAATCCTGTACTTATCCGTGCATTTGA 34 6223252 0.743927985 11 31 313 0.921052632 1.544068044 0.263157895 0.117647059 0.210526316 34 3 0 35 X:6223232-6223290 7 sqh FBtr0345294|FBtr0070877|FBtr0339504|FBtr0339502|FBtr0339503 6223059|6223059|6223059|6223059|6223059 6223406|6223406|6223406|6223406|6223406 GTACTTA 7mer-m8 dme-miR-252-5p X - 6223197 6223299 3'utr sqh FlyBase G49024.1 TTTTTTTTTTGGTTTCGCGCCTTCTGTTCTTTGATTCCTGATAATCCTGTACTTATCCGTGCATTTGAATTAAACAAAAAGTAGCCAACACCAGCGATTGTTA 28 6223252 0.989476832 14 27 256 0.973684211 1.568201724 0.368421053 0.321428571 0.5 28 1 0 37 X:6223197-6223299 7 19.5 6118 FBgn0003514 2178.836667 260.73 395.3566667 0.00894973 0.074790013 0.049322553 1 1 1 0.01 dme-miR-999-3p 6mer3-8 AGTTAA X 622751 622756 + X_622751_622756_+ 1 1 1 0 mod(r) FBtr0089724|FBtr0335123|FBtr0335122|FBtr0089725|FBtr0089723|FBtr0089726 622627|622627|622627|622627|622627|622627 623051|623051|623051|623051|623051|623051 X + 622733 622779 3'utr mod(r) FlyBase G57775.1 AATGTTAGTAAATAGAGAAGTTAAGCCAGAGATGGGGCGACATAATC 81 622754 0.809606532 3 79 290 0.976744186 1.924279286 0.511627907 0.061728395 0.11627907 81 2 0 84 X:622733-622779 6 mod(r) FBtr0089723|FBtr0089726|FBtr0335122|FBtr0089725|FBtr0089724|FBtr0335123 622627|622627|622627|622627|622627|622627 623051|623051|623051|623051|623051|623051 AGTTAA 6mer3-8 dme-miR-999-3p X + 622738 622777 3'utr mod(r) FlyBase G43710.1 TAGTAAATAGAGAAGTTAAGCCAGAGATGGGGCGACATAA 43 622754 0.762791703 3 42 138 0.984375 1.799340549 0.625 0.348837209 0.5625 43 1 0 63 X:622738-622777 6 61 6119 FBgn0016038 99 9.14 14.07333333 0.616161616 6.673960613 4.334438655 -3 -3 -3 0.01 dme-bantam-3p 6mer2-7 GATCTC X 6231871 6231876 + X_6231871_6231876_+ 1 1 1 0 CG14446 FBtr0339696|FBtr0307164|FBtr0307165|FBtr0339697 6231056|6231056|6231056|6231317 6236218|6236004|6233166|6233166 X + 6231844 6231897 5'utr CG14446 FlyBase G59084.1 TATATATATATTTATATATATTCAGACGATCTCTGCCCGATCTTGCATATCCTA 109 6231877 0.850178525 8 101 811 0.94214876 1.579783597 0.421487603 0.091743119 0.181818182 109 5 2 114 X:6231844-6231897 6 CG14446 FBtr0339697|FBtr0307165|FBtr0307164|FBtr0339696 6231317|6231056|6231056|6231056 6233166|6233166|6236004|6236218 GATCTC 6mer2-7 dme-bantam-3p X + 6231831 6231923 5'utr CG14446 FlyBase G44701.1 GATTCAACTTTTCTATATATATATTTATATATATTCAGACGATCTCTGCCCGATCTTGCATATCCTATATCTTACTCTCTGTTGTGTCTGTGC 77 6231877 0.983505021 13 71 549 0.910891089 1.264817823 0.376237624 0.246753247 0.425742574 77 5 4 92 X:6231831-6231923 6 89 6120 FBgn0262730 931.1666667 14.78666667 22.41333333 0.095579023 6.018935978 3.970850684 -6 -6 -6 0.01 dme-miR-305-3p 8mer-m1 ATGTGCCG X 6232071 6232078 + X_6232071_6232078_+ 0.628736567 0.628736567 0.628736567 0 CG14446 FBtr0339696|FBtr0307164|FBtr0307165|FBtr0339697 6231056|6231056|6231056|6231317 6236218|6236004|6233166|6233166 X + 6232044 6232122 5'utr CG14446 FlyBase G59085.1 GTTAAGAGAAAGAGGAGAGTTTCCAAAATGTGCCGGGCACCGCTCCCAAAAGTCGCTAGAACTTAAAAACTGAATAATA 20 6232073 0.941481757 8 18 74 0.9 1.255272505 0.05 0 0 20 2 0 18 X:6232044-6232122 8 CG14446 FBtr0339697|FBtr0307165|FBtr0307164|FBtr0339696 6231317|6231056|6231056|6231056 6233166|6233166|6236004|6236218 ATGTGCCG 8mer-m1 dme-miR-305-3p X + 6232061 6232104 5'utr CG14446 FlyBase G44702.1 AGTTTCCAAAATGTGCCGGGCACCGCTCCCAAAAGTCGCTAGAA 8 6232072 0.917495496 3 6 22 0.888888889 0.903089987 0.111111111 0.125 0.222222222 8 1 0 8 X:6232061-6232104 8 9.5 6121 FBgn0262730 931.1666667 14.78666667 22.41333333 0.010202255 0.642470694 0.423854848 -2 -1 -1.5 0.01 dme-miR-1007-3p 7mer-m8 TGAGCTT X 6232393 6232399 + X_6232393_6232399_+ 0.618338264 0.619730856 0.61903456 0.000984717 CG14446 FBtr0339696|FBtr0307164|FBtr0307165|FBtr0339697 6231056|6231056|6231056|6231317 6236218|6236004|6233166|6233166 X + 6232366 6232430 5'utr CG14446 FlyBase G59087.1 AGATCACAAATAATATATAGACGCTTATGAGCTTTATTTGATCGATTGCATTGAAAAGGAAGCAG 54 6232393 0.781181534 7 51 419 0.956521739 1.51851394 0.420289855 0.240740741 0.405797101 54 2 1 66 X:6232366-6232430 7 CG14446 FBtr0339697|FBtr0307165|FBtr0307164|FBtr0339696 6231317|6231056|6231056|6231056 6233166|6233166|6236004|6236218 TGAGCTT 7mer-m8 dme-miR-1007-3p X + 6232373 6232445 5'utr CG14446 FlyBase G44703.1 AAATAATATATAGACGCTTATGAGCTTTATTTGATCGATTGCATTGAAAAGGAAGCAGCTAAAAGCAGAACAG 49 6232393 0.985362777 5 48 396 0.987951807 1.612783857 0.457831325 0.469387755 0.686746988 49 0 1 82 X:6232373-6232445 7 41 6122 FBgn0262730 931.1666667 14.78666667 22.41333333 0.044030786 2.77276826 1.829268293 0 0 0 0.01 dme-bantam-3p 6mer2-7 GATCTC X 6233535 6233540 + X_6233535_6233540_+ 1 1 1 0 CG14446 FBtr0339696|FBtr0307164 6231056|6231056 6236218|6236004 X + 6233511 6233628 3'utr CG14446 FlyBase G59094.1 AGAGTCTTTGAATTAACTGAAATAGATCTCGACTTGGTCTTATAGCACGCAAACGCACTGTACCGTATTATTATACTTAGTCCTGAGTTGCTCCCTATCGATCTAAGGACTGCAAAGA 8 6233531 0.97316662 8 8 59 1 0.903089987 0 0 0 8 0 0 8 X:6233511-6233628 6 CG14446 FBtr0307164|FBtr0339696 6231056|6231056 6236004|6236218 GATCTC 6mer2-7 dme-bantam-3p X + 6233520 6233545 3'utr CG14446 FlyBase G44709.1 GAATTAACTGAAATAGATCTCGACTT 4 6233533 0.845280577 2 2 22 0.8 0.602059991 0 0.25 0.4 4 1 0 4 X:6233520-6233545 6 4 6123 FBgn0262730 931.1666667 14.78666667 22.41333333 0.004295686 0.270513977 0.178465199 4 2 3 0.01 dme-miR-34-5p 8mer-A1 CACTGCCA X 6233806 6233813 + X_6233806_6233813_+ 0.678383804 0.678327588 0.678355696 3.97E-05 CG14446 FBtr0339696|FBtr0307164 6231056|6231056 6236218|6236004 X + 6233783 6234107 3'utr CG14446 FlyBase G59096.1 CACACACACTCTCAGTCGAGCTGCACTGCCATTGGTGAAAGTGAAAATGAGATTTAGGCCTATTGAAGCTTCCAGCATTTACCAGTGCCATAACTTTATAACTTTATATAACTTTACCCGCACGCCCAGCCCAGCCCAGTATGCCGATCAATCCGATCGATTGATCTCGGCTAGCATCGAGCTTAGCACTAGCTTTCTTCCGAGCTTGCTTGTTGGACAGACAGTGAGAACGAACGAAGAGACATCAGCCTCCATCCATTAAAGAACTTAGTCTTAGCCGATCTGGAGTCCAAAATTTCATTGGAAATTCCGCCATGCGGATCGG 125 6233814 0.97123952 35 119 742 0.95483871 1.86923172 0.367741935 0.2 0.35483871 125 6 1 148 X:6233783-6234107 8 CG14446 FBtr0307164|FBtr0339696 6231056|6231056 6236004|6236218 CACTGCCA 8mer-A1 dme-miR-34-5p X + 6233761 6233894 3'utr CG14446 FlyBase G44711.1 ATCGAAACATACACCAACACACCACACACACTCTCAGTCGAGCTGCACTGCCATTGGTGAAAGTGAAAATGAGATTTAGGCCTATTGAAGCTTCCAGCATTTACCAGTGCCATAACTTTATAACTTTATATAAC 44 6233814 0.971073238 12 42 245 0.948051948 1.86332286 0.480519481 0.454545455 0.688311688 44 4 0 73 X:6233761-6233894 8 34 6124 FBgn0262730 931.1666667 14.78666667 22.41333333 0.036513335 2.299368801 1.516954194 -8 -8 -8 0.01 dme-bantam-3p 7mer-m8 TGATCTC X 6233944 6233950 + X_6233944_6233950_+ 0.661615243 0.661615243 0.661615243 0 CG14446 FBtr0339696|FBtr0307164 6231056|6231056 6236218|6236004 X + 6233783 6234107 3'utr CG14446 FlyBase G59096.1 CACACACACTCTCAGTCGAGCTGCACTGCCATTGGTGAAAGTGAAAATGAGATTTAGGCCTATTGAAGCTTCCAGCATTTACCAGTGCCATAACTTTATAACTTTATATAACTTTACCCGCACGCCCAGCCCAGCCCAGTATGCCGATCAATCCGATCGATTGATCTCGGCTAGCATCGAGCTTAGCACTAGCTTTCTTCCGAGCTTGCTTGTTGGACAGACAGTGAGAACGAACGAAGAGACATCAGCCTCCATCCATTAAAGAACTTAGTCTTAGCCGATCTGGAGTCCAAAATTTCATTGGAAATTCCGCCATGCGGATCGG 125 6233943 0.97123952 35 119 742 0.95483871 1.86923172 0.367741935 0.2 0.35483871 125 6 1 148 X:6233783-6234107 7 CG14446 FBtr0307164|FBtr0339696 6231056|6231056 6236004|6236218 TGATCTC 7mer-m8 dme-bantam-3p X + 6233914 6233971 3'utr CG14446 FlyBase G44712.1 CAGCCCAGTATGCCGATCAATCCGATCGATTGATCTCGGCTAGCATCGAGCTTAGCAC 29 6233943 0.97203118 4 24 144 0.909090909 1 0.227272727 0.344827586 0.568181818 29 1 3 40 X:6233914-6233971 7 21 6125 FBgn0262730 931.1666667 14.78666667 22.41333333 0.022552354 1.420198377 0.936942296 1 1 1 0.01 dme-miR-33-5p 8mer-A1 CAATGCAA X 6234242 6234249 + X_6234242_6234249_+ 0.634552243 0.613416911 0.623984577 0.014944914 CG14446 FBtr0339696|FBtr0307164 6231056|6231056 6236218|6236004 X + 6234131 6234266 3'utr CG14446 FlyBase G59097.1 GGCGTGAGGCGATTGATGACTATTAGCATTTTTAATCTAGACAAATGCTTGGCTTCAATTCGCGGATCGGCTTAATCCTTCTTGTACTTGTATGTATGTGTTTAACGATTCCAATGCAAAGACTTTTATATATCTT 66 6234256 0.985656986 16 62 513 0.949367089 1.875061263 0.151898734 0.151515152 0.291139241 66 4 0 75 X:6234131-6234266 8 CG14446 FBtr0307164|FBtr0339696 6231056|6231056 6236004|6236218 CAATGCAA 8mer-A1 dme-miR-33-5p X + 6234179 6234274 3'utr CG14446 FlyBase G44713.1 TTGGCTTCAATTCGCGGATCGGCTTAATCCTTCTTGTACTTGTATGTATGTGTTTAACGATTCCAATGCAAAGACTTTTATATATCTTTTTTTTTT 62 6234256 0.744168607 13 58 510 0.951807229 1.420505837 0.072289157 0.290322581 0.469879518 62 2 2 79 X:6234179-6234274 8 46 6126 FBgn0262730 931.1666667 14.78666667 22.41333333 0.049400394 3.11091073 2.052349792 -14 -14 -14 0.01 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 6234381 6234388 + X_6234381_6234388_+ 0.63113665 0.63113665 0.63113665 0 CG14446 FBtr0339696|FBtr0307164 6231056|6231056 6236218|6236004 X + 6234332 6234424 3'utr CG14446 FlyBase G59098.1 TATTGTTTAGCATGTTTCGACTGCAATTTAAGCCGAATTTTAGATCTTCTCTAGTCAGTTCAAAGCGTTTTTTGTTCGTTTTGTCACGCCCAT 71 6234380 0.986109137 16 62 598 0.894117647 1.579783597 0.164705882 0.183098592 0.317647059 71 8 1 76 X:6234332-6234424 8 CG14446 FBtr0307164|FBtr0339696 6231056|6231056 6236004|6236218 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X + 6234328 6234400 3'utr CG14446 FlyBase G44714.1 ACATTATTGTTTAGCATGTTTCGACTGCAATTTAAGCCGAATTTTAGATCTTCTCTAGTCAGTTCAAAGCGTT 47 6234380 0.989183898 12 41 394 0.904109589 1.217483944 0.191780822 0.446808511 0.643835616 47 4 3 66 X:6234328-6234400 8 53 6127 FBgn0262730 931.1666667 14.78666667 22.41333333 0.056917845 3.584310189 2.364663891 1 1 1 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA X 6240861 6240866 - X_6240861_6240866_- 0.999997817 1 0.999998909 1.56E-06 Rbcn-3A FBtr0303341 6240743 6241463 X - 6240836 6240885 3'utr Rbcn-3A FlyBase G65066.1 TGTCTTTATGTTGAGCTTTGTGCAAAAATTTGTCTGTTGTTGAATCAATC 18 6240868 0.984502225 5 18 152 1 1.361727836 0.260869565 0.277777778 0.434782609 18 0 0 23 X:6240836-6240885 6 Rbcn-3A FBtr0303341 6240743 6241463 GTGCAA 6mer3-8 dme-miR-92b-3p X - 6240812 6240885 3'utr Rbcn-3A FlyBase G49033.1 TGTCTTTATGTTGAGCTTTGTGCAAAAATTTGTCTGTTGTTGAATCAATCAAGATATATGTATACCTAAAACGA 23 6240868 0.986006175 9 22 188 1 1.531478917 0.205882353 0.434782609 0.617647059 23 0 0 34 X:6240812-6240885 6 19 6128 FBgn0023458 2065.706667 22.39 34.44 0.009197821 0.848593122 0.551684088 2 2 2 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 6257790 6257795 - X_6257790_6257795_- 1 1 1 0 schlank FBtr0070938|FBtr0070937 6257666|6257666 6258314|6258314 X - 6257731 6257811 3'utr schlank FlyBase G65110.1 AGCACAGTGGGACTAAACCAAAATCGCTTAGGCAAGAATTCAATAGACGAAGAGTAAAAAATGAATAGTAGTCAAAACTAT 8 6257769 0.940808119 6 7 31 1 0.903089987 0.125 0 0 8 0 0 8 X:6257731-6257811 6 schlank FBtr0070937|FBtr0070938 6257666|6257666 6258314|6258314 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X - 6257733 6257806 3'utr schlank FlyBase G49058.1 AGTGGGACTAAACCAAAATCGCTTAGGCAAGAATTCAATAGACGAAGAGTAAAAAATGAATAGTAGTCAAAACT 9 6257784 0.949913664 4 8 35 0.923076923 0.77815125 0.076923077 0.333333333 0.538461538 9 0 1 12 X:6257733-6257806 6 3.5 6129 FBgn0040918 5217.093333 271.4866667 416.8733333 0.000670872 0.012891978 0.008395836 -26 -11 -18.5 0.01 dme-miR-283-5p 7mer-m1 GATATTT X 6274650 6274656 + X_6274650_6274656_+ 0.765586663 0.765586663 0.765586663 0 Spt6 FBtr0340027|FBtr0070896 6274423|6274423 6274888|6274984 X + 6274594 6274688 3'utr Spt6 FlyBase G59139.1 GATCCAGTTGCACTAATCTTAGTACTTTGGAGTGCGATTCCGCATTGATCCTCAACGATATTTAGGTTTAAGTCAAGTCCATAACTGATCCGCAG 60 6274639 0.979042292 16 59 408 0.985294118 1.826074803 0.176470588 0.1 0.205882353 60 1 0 67 X:6274594-6274688 7 Spt6 FBtr0340027|FBtr0070896 6274423|6274423 6274888|6274984 GATATTT 7mer-m1 dme-miR-283-5p X + 6274617 6274685 3'utr Spt6 FlyBase G44743.1 ACTTTGGAGTGCGATTCCGCATTGATCCTCAACGATATTTAGGTTTAAGTCAAGTCCATAACTGATCCG 47 6274639 0.861611508 9 41 301 0.913043478 1.498310554 0.391304348 0.319148936 0.536231884 47 5 1 63 X:6274617-6274685 7 35.5 6130 FBgn0028982 1489.333333 29.17333333 44.83333333 0.023836168 1.216864717 0.791821561 11 11 11 0.01 dme-miR-305-5p 7mer-A1 GTACAAA X 6274987 6274993 - X_6274987_6274993_- 0.782911824 0.782911824 0.782911824 0 CG3566 FBtr0305177|FBtr0089869|FBtr0089870 6274970|6274970|6274970 6275335|6276223|6275082 X - 6274975 6275005 3'utr CG3566 FlyBase G65122.1 ACGAAATAAATTGTACAAATTGCTTAAATTA 30 6274995 0.717764319 4 30 173 1 1.653212514 0.533333333 0.366666667 0.577777778 30 0 0 45 X:6274975-6275005 7 CG3566 FBtr0089869|FBtr0089870|FBtr0305177 6274970|6274970|6274970 6276223|6275082|6275335 GTACAAA 7mer-A1 dme-miR-305-5p X - 6274976 6275010 3'utr CG3566 FlyBase G49066.1 TTGACACGAAATAAATTGTACAAATTGCTTAAATT 16 6274995 0.731151875 3 16 87 1 1.255272505 0.277777778 0.125 0.222222222 16 0 0 18 X:6274976-6275010 7 22.5 6131 FBgn0029854 227.9933333 32.42666667 49.59666667 0.098687096 0.693873355 0.45365952 2 2 2 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC X 6275081 6275086 - X_6275081_6275086_- 1 1 1 0 CG3566 FBtr0305177|FBtr0089869 6274970|6274970 6275335|6276223 X - 6275065 6275159 stop_codon CG3566 FlyBase G65123.1 TGGCACTGGCCCTGGGCGCCGCCTTCATCGGCATCTCGCTGGTCTATGTGATCCGACGCGGTGTGGCCAGAAACTAGTCTGCGGCCGGACTGCAT 25 6275080 0.953820928 7 25 114 1 1.477121255 0.5 0.2 0.333333333 25 0 0 30 X:6275065-6275159 6 CG3566 FBtr0089869|FBtr0305177 6274970|6274970 6276223|6275335 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" X - 6275047 6275123 stop_codon CG3566 FlyBase G49067.1 CGCTGGTCTATGTGATCCGACGCGGTGTGGCCAGAAACTAGTCTGCGGCCGGACTGCATTACGAGATTCCAGATATA 15 6275080 0.947555838 7 15 63 1 1.322219295 0.19047619 0.2 0.428571429 15 0 0 21 X:6275047-6275123 6 14 6132 FBgn0029854 227.9933333 32.42666667 49.59666667 0.061405304 0.431743421 0.282277035 -6 -6 -6 0.01 dme-bantam-3p 7mer-m8 TGATCTC X 6276109 6276115 - X_6276109_6276115_- 0.661615243 0.661615243 0.661615243 0 CG3566 FBtr0089869 6274970 6276223 X - 6276095 6276135 3'utr CG3566 FlyBase G65126.1 TTCTCCGCTCCCACACGGATTGATCTCCTTATCTCGCTAGA 13 6276107 0.693798181 2 13 88 1 1.113943352 0 0 0 13 0 0 13 X:6276095-6276135 7 CG3566 FBtr0089869 6274970 6276223 TGATCTC 7mer-m8 dme-bantam-3p X - 6276096 6276130 3'utr CG3566 FlyBase G49070.1 CGCTCCCACACGGATTGATCTCCTTATCTCGCTAG 5 6276116 0.867292799 2 5 34 1 0.954242509 0 0.6 0.777777778 5 0 0 9 X:6276096-6276130 7 9 6133 FBgn0029854 227.9933333 32.42666667 49.59666667 0.039474838 0.277549342 0.181463808 -8 1 -3.5 0.01 dme-miR-980-3p 8mer-A1 GGCAGCTA X 6298611 6298618 + X_6298611_6298618_+ 0.668734347 0.668734347 0.668734347 0 CG3815 FBtr0070899 6298491 6298970 X + 6298545 6298695 3'utr CG3815 FlyBase G59160.1 AAGACACAGAAACATATACGCGCTCAACCGCAGCCAACTCCAGTGGAGCAGCACCAATCTCAGTGGGGCAGCTAGCAGCCAGGCATAGGGTTAGGGTTAGCAGATACCAGTTCAACTTCATCGCATCAATCATCGCAATGCAAAGCCTCGG 86 6298608 0.896491981 10 82 265 0.959183673 1.496006599 0.397959184 0.127906977 0.234693878 86 2 2 94 X:6298545-6298695 8 CG3815 FBtr0070899 6298491 6298970 GGCAGCTA 8mer-A1 dme-miR-980-3p X + 6298545 6298703 3'utr CG3815 FlyBase G44756.1 AAGACACAGAAACATATACGCGCTCAACCGCAGCCAACTCCAGTGGAGCAGCACCAATCTCAGTGGGGCAGCTAGCAGCCAGGCATAGGGTTAGGGTTAGCAGATACCAGTTCAACTTCATCGCATCAATCATCGCAATGCAAAGCCTCGGCAGTACTT 56 6298608 0.998818654 8 53 170 0.957894737 1.959041392 0.378947368 0.535714286 0.726315789 56 4 0 91 X:6298545-6298703 8 43 6134 FBgn0029861 300.3333333 11.21333333 17.14666667 0.143174251 3.834720571 2.50777605 3 3 3 0.01 dme-miR-252-5p 7mer-m8 GTACTTA X 6299191 6299197 - X_6299191_6299197_- 0.588299917 0.588299917 0.588299917 0 CG12219 FBtr0070925 6299052 6299296 X - 6299167 6299219 3'utr CG12219 FlyBase G65165.1 TTGCATATTAGCCATACCGAATGTACTTATCCGACGTTTCGTGTACTCCACAA 80 6299198 0.871310806 3 79 523 0.989473684 1.973127854 0.010526316 0.1625 0.294736842 80 1 0 94 X:6299167-6299219 7 CG12219 FBtr0070925 6299052 6299296 GTACTTA 7mer-m8 dme-miR-252-5p X - 6299101 6299219 3'utr CG12219 FlyBase G49094.1 TTGCATATTAGCCATACCGAATGTACTTATCCGACGTTTCGTGTACTCCACAAAGTCAAGGCGTCCCGCCGCCTGGCACCTATTGTGTATACTCTTCTCGTTCTCTATAATGCCTTAAC 64 6299198 0.978817854 8 64 431 1 1.968482949 0.032258065 0.359375 0.559139785 64 0 0 93 X:6299101-6299219 7 69 6135 FBgn0043796 206.3333333 12.49333333 19.20666667 0.334410339 5.522945571 3.592502603 1 1 1 0.01 dme-miR-308-3p 8mer-m1 CTGTGATT X 633704 633711 - X_633704_633711_- 0.385560641 0.385560641 0.385560641 0 Dredd FBtr0114561 633620 634524 X - 633651 633731 stop_codon Dredd FlyBase G63872.1 ACGTGTACTTTCCACCTCGTCTGTGATTTTGGTTTTTAACGTTAGCGCAGTTGTACGTCCACTCAAATTGCTCTATAAAGG 32 633704 0.991231728 6 28 296 0.9 1.556302501 0.075 0.21875 0.375 32 4 0 36 X:633651-633731 8 Dredd FBtr0114561 633620 634524 CTGTGATT 8mer-m1 dme-miR-308-3p X - 633657 633747 stop_codon Dredd FlyBase G48146.1 AGCACATTTCGCCAGCACGTGTACTTTCCACCTCGTCTGTGATTTTGGTTTTTAACGTTAGCGCAGTTGTACGTCCACTCAAATTGCTCTA 27 633704 0.991268941 10 25 269 0.906976744 1.591064607 0.023255814 0.407407407 0.627906977 27 4 0 39 X:633657-633747 8 23.5 6136 FBgn0020381 93.66666667 6.923333333 10.50666667 0.25088968 3.394318729 2.236675127 -7 -7 -7 0.01 dme-miR-980-3p 7mer-A1 GCAGCTA X 634210 634216 - X_634210_634216_- 0.823349562 0.823349562 0.823349562 0 Dredd FBtr0114561 633620 634524 X - 634155 634237 3'utr Dredd FlyBase G63873.1 CGGATATCGAGGACTTGCTCTGCAGCTACGACACCCTGTACTACAAACCGAAGTTGCTAATCATACAAGCCTGCCAGGAGAAG 22 634201 0.931705387 7 21 78 1 1.414973348 0.076923077 0.181818182 0.307692308 22 0 0 26 X:634155-634237 7 Dredd FBtr0114561 633620 634524 GCAGCTA 7mer-A1 dme-miR-980-3p X - 634160 634223 3'utr Dredd FlyBase G48147.1 TTGCTCTGCAGCTACGACACCCTGTACTACAAACCGAAGTTGCTAATCATACAAGCCTGCCAGG 7 634201 0.917562512 4 7 29 1 1 0.1 0.428571429 0.6 7 0 0 10 X:634160-634223 7 11 6137 FBgn0020381 93.66666667 6.923333333 10.50666667 0.117437722 1.588830043 1.046954315 -15 -15 -15 0.01 dme-miR-2a-2-5p 7mer-A1 GATGAGA X 6360521 6360527 + X_6360521_6360527_+ 0.782911824 0.782911824 0.782911824 0 kdn FBtr0070906|FBtr0070907 6360362|6360362 6361323|6361323 X + 6360359 6360534 stop_codon kdn FlyBase G59186.1 AGTAAGCAACTGGAGCAGGAGGAGCGGGAGGAGCTGGAGTTCAACCTTTTGTAGCCGGAGGACGATGGACGTAAAATGCAGAAGCTGTAGATTGTAATTGACGAGGGAAGAGGCAGAAAGAGAGAGATAGAGAGAGAGAGAGAATCGATCGGATTGGATTAGGATGAGATGGGATT 137 6360506 0.963931241 21 117 590 0.872483221 1 0.268456376 0.065693431 0.140939597 137 7 12 130 X:6360359-6360534 7 kdn FBtr0070906|FBtr0070907 6360362|6360362 6361323|6361323 GATGAGA 7mer-A1 dme-miR-2a-2-5p X + 6360478 6360593 3'utr kdn FlyBase G44780.1 GAGAGAGATAGAGAGAGAGAGAGAATCGATCGGATTGGATTAGGATGAGATGGGATTGGATTGGATGGATATCGATATGACGACGCTGATATTGAGGGAGTTGGAGATGTGTAGTT 45 6360506 0.719447958 14 35 223 0.811594203 1.049218023 0.47826087 0.333333333 0.565217391 45 9 4 56 X:6360478-6360593 7 18 6138 FBgn0261955 413.3133333 20.16333333 31.04333333 0.043550494 0.892709539 0.57983464 15 15 15 0.01 dme-miR-1012-3p 7mer-m8 TTGACTA X 6360818 6360824 + X_6360818_6360824_+ 0.631525999 0.631525999 0.631525999 0 kdn FBtr0070906|FBtr0070907 6360362|6360362 6361323|6361323 X + 6360804 6360852 3'utr kdn FlyBase G59187.1 ATATATATATACGATTGACTATATATATAGGGACAGGCAGAGAGAGTAA 12 6360827 0.958975385 5 11 61 1 1.146128036 0.357142857 0.166666667 0.285714286 12 0 0 14 X:6360804-6360852 7 kdn FBtr0070906|FBtr0070907 6360362|6360362 6361323|6361323 TTGACTA 7mer-m8 dme-miR-1012-3p X + 6360802 6360865 3'utr kdn FlyBase G44782.1 ATATATATATATACGATTGACTATATATATAGGGACAGGCAGAGAGAGTAAAATGTTTGCGCCT 6 6360819 0.989375842 3 3 39 0.75 0.77815125 0.25 0.166666667 0.375 6 2 0 6 X:6360802-6360865 7 5.5 6139 FBgn0261955 413.3133333 20.16333333 31.04333333 0.013307096 0.272772359 0.177171695 -9 -1 -5 0.01 dme-miR-304-5p 6mer3-8 TGAGAT X 6370850 6370855 + X_6370850_6370855_+ 1 1 1 0 Marf FBtr0070910|FBtr0070909|FBtr0343373 6370259|6370259|6370259 6370924|6370924|6370924 X + 6370844 6370895 3'utr Marf FlyBase G59211.1 AATTGTTGAGATGTTGCAAAGCATGAGAATGAGAATGATTCATGAACGAAAA 15 6370873 0.873684523 4 15 77 1 1.278753601 0.157894737 0.133333333 0.315789474 15 0 0 19 X:6370844-6370895 6 Marf FBtr0070910|FBtr0070909|FBtr0343373 6370259|6370259|6370259 6370924|6370924|6370924 TGAGAT 6mer3-8 dme-miR-304-5p X + 6370844 6370886 3'utr Marf FlyBase G44797.1 AATTGTTGAGATGTTGCAAAGCATGAGAATGAGAATGATTCAT 8 6370870 0.886942265 4 8 39 1 1 0.1 0.125 0.3 8 0 0 10 X:6370844-6370886 6 5.5 6140 FBgn0029870 1555.153333 51.79333333 79.11 0.003536629 0.106191273 0.069523448 -23 -20 -21.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 6371106 6371111 - X_6371106_6371111_- 1 1 1 0 PpV FBtr0070921|FBtr0070921|FBtr0070921|FBtr0331430|FBtr0331430|FBtr0331430|FBtr0331431|FBtr0331431|FBtr0331431|FBtr0331432|FBtr0331432|FBtr0331432 6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063 6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728 X - 6371096 6371127 3'utr PpV FlyBase G65179.1 AAGAATAACCCAATTGTGTGATCCCGATCAAA 12 6371114 0.78320391 2 12 66 1 1.079181246 0.25 0 0 12 0 0 12 X:6371096-6371127 6 PpV FBtr0331431|FBtr0331431|FBtr0331431|FBtr0331432|FBtr0331432|FBtr0331432|FBtr0070921|FBtr0070921|FBtr0070921|FBtr0331430|FBtr0331430|FBtr0331430 6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063 6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 6371085 6371125 3'utr PpV FlyBase G49105.1 GAATAACCCAATTGTGTGATCCCGATCAAAACGATATGATT 10 6371113 0.967605388 3 10 54 1 1.041392685 0.181818182 0.1 0.181818182 10 0 0 11 X:6371085-6371125 6 11 6141 FBgn0003139 501.9866667 38.39333333 58.97333333 0.021912933 0.286508074 0.186524983 3 2 2.5 0.01 dme-bantam-3p 6mer3-8 TGATCT X 643393 643398 + X_643393_643398_+ 1 1 1 0 su(s) FBtr0340081|FBtr0340082|FBtr0070120 643340|643340|643340 643760|643760|643760 X + 643365 643458 3'utr su(s) FlyBase G57810.1 AAACGCAAAAGGAGCCCTTTTGCCCCAATGATCTTAAAGCGATGCTATGCCACATGACCCTTTCCCCCAACCATACCATACGTCGTGGAAAACT 434 643393 0.984289076 11 427 2834 0.980582524 2.703291378 0.440776699 0.156682028 0.289320388 434 10 0 505 X:643365-643458 6 su(s) FBtr0070120|FBtr0340082|FBtr0340081 643340|643340|643340 643760|643760|643760 TGATCT 6mer3-8 dme-bantam-3p X + 643365 643439 3'utr su(s) FlyBase G43734.1 AAACGCAAAAGGAGCCCTTTTGCCCCAATGATCTTAAAGCGATGCTATGCCACATGACCCTTTCCCCCAACCATA 246 643393 0.971579978 9 243 1535 0.988603989 2.540329475 0.49002849 0.321138211 0.524216524 246 4 0 347 X:643365-643439 6 333 6142 FBgn0003575 432.3133333 10.81666667 16.53666667 0.770274646 30.78582435 20.13706914 0 0 0 0.01 dme-miR-970-3p 6mer3-8 TCTTAT X 643567 643572 + X_643567_643572_+ 1 1 1 0 su(s) FBtr0340081|FBtr0340082|FBtr0070120 643340|643340|643340 643760|643760|643760 X + 643552 643581 3'utr su(s) FlyBase G57812.1 CGCTAGGTGTAAGGATCTTATTAGCTATAC 5 643572 0.644613676 3 5 34 1 0.698970004 0 0 0 5 0 0 5 X:643552-643581 6 su(s) FBtr0070120|FBtr0340082|FBtr0340081 643340|643340|643340 643760|643760|643760 TCTTAT 6mer3-8 dme-miR-970-3p X + 643522 643582 3'utr su(s) FlyBase G43736.1 CCGAATCCCCATTATTGTCACTATTTTTTTCGCTAGGTGTAAGGATCTTATTAGCTATACG 8 643570 0.985374383 6 7 59 1 1.079181246 0.25 0.375 0.583333333 8 0 0 12 X:643522-643582 6 5.5 6143 FBgn0003575 432.3133333 10.81666667 16.53666667 0.012722254 0.508474576 0.332594235 -5 -3 -4 0.01 dme-miR-252-5p 6mer3-8 GTACTT X 646315 646320 + X_646315_646320_+ 1 1 1 0 CG13367 FBtr0070121 646197 646386 X + 646253 646375 3'utr CG13367 FlyBase G57822.1 ATTTATTGCAACTTTTACTCTTCGTAAACGGGCTACTTGCCGAACAGAAAATAATTCAAAAAGTACTTGATGTACTGTAGTACCAACTGAACTCAATCAGCAATTAATGAATAAAATACAATT 21 646327 0.96526471 13 21 138 1 1.361727836 0.217391304 0.095238095 0.173913043 21 0 0 23 X:646253-646375 6 CG13367 FBtr0070121 646197 646386 GTACTT 6mer3-8 dme-miR-252-5p X + 646290 646376 3'utr CG13367 FlyBase G43742.1 TGCCGAACAGAAAATAATTCAAAAAGTACTTGATGTACTGTAGTACCAACTGAACTCAATCAGCAATTAATGAATAAAATACAATTT 20 646340 0.974864306 9 20 122 1 1.51851394 0.272727273 0.45 0.666666667 20 0 0 33 X:646290-646376 6 5 6144 FBgn0025634 131.6666667 10.53666667 16.25 0.037974684 0.474533376 0.307692308 -12 -25 -18.5 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT X 648538 648544 + X_648538_648544_+ 0.658999527 0.658999527 0.658999527 0 Roc1a FBtr0308651|FBtr0343564 647922|647922 648597|648597 X + 648504 648549 3'utr Roc1a FlyBase G57827.1 TCTTTTTAGTTTATTATGAATGTTTTGCGGCCGCGGCAGCTTAGAA 5 648545 0.931073291 3 4 26 1 0.77815125 0 0.2 0.333333333 5 0 0 6 X:648504-648549 7 Roc1a FBtr0308651|FBtr0343564 647922|647922 648597|648597 GGCAGCT 7mer-m8 dme-miR-980-3p X + 648525 648551 3'utr Roc1a FlyBase G43748.1 GTTTTGCGGCCGCGGCAGCTTAGAAAA 5 648545 0.664585583 2 4 12 1 0.84509804 0 0.4 0.571428571 5 0 0 7 X:648525-648551 7 4 6145 FBgn0025638 301.6933333 54.65333333 83.83333333 0.013258496 0.073188583 0.047713718 -7 -7 -7 0.01 dme-miR-190-5p 7mer-m1 CATATCT X 648569 648575 - X_648569_648575_- 0.765586565 0.765586663 0.765586614 7.07E-08 Hmt4-20 FBtr0070151 648481 650049 X - 648516 648640 3'utr Hmt4-20 FlyBase G63876.1 AAGTTTAGTTAGTAGCTTATGCAATTAAACATTAATCATATTTGATATATACCATATACTTTATTCATATCTGTAACTAATGTGTATTATTTTCTAAGCTGCCGCGGCCGCAAAACATTCATAAT 10 648560 0.989219728 7 9 89 1 1 0 0 0 10 0 0 10 X:648516-648640 7 Hmt4-20 FBtr0070151 648481 650049 CATATCT 7mer-m1 dme-miR-190-5p X - 648545 648574 3'utr Hmt4-20 FlyBase G48148.1 ATATCTGTAACTAATGTGTATTATTTTCTA 5 648559 0.720481281 2 5 55 1 0.84509804 0 0.4 0.571428571 5 0 0 7 X:648545-648574 6 4.5 6146 FBgn0025639 495.87 9.743333333 14.96 0.009074959 0.461854259 0.300802139 -15 -16 -15.5 0.01 dme-miR-79-3p 8mer-A1 TAGCTTTA X 649248 649255 - X_649248_649255_- 0.625364009 0.625364009 0.625364009 0 Hmt4-20 FBtr0070151|FBtr0308652 648481|648889 650049|650049 X - 649224 649267 5'utr Hmt4-20 FlyBase G63878.1 CGAAACCCAACTTAGCTTTACACCAAGCAAGCCCCTCTGTTTGT 14 649256 0.954141693 2 12 55 0.888888889 1.204119983 0.166666667 0.214285714 0.388888889 14 2 0 16 X:649224-649267 8 Hmt4-20 FBtr0308652|FBtr0070151 648889|648481 650049|650049 TAGCTTTA 8mer-A1 dme-miR-79-3p X - 649206 649281 5'utr Hmt4-20 FlyBase G48150.1 AGACGCCTTGCATCCGAAACCCAACTTAGCTTTACACCAAGCAAGCCCCTCTGTTTGTTGCAAGATAATGAAACAA 8 649256 0.981180479 3 6 44 0.818181818 0.653212514 0.181818182 0.375 0.545454545 8 1 1 9 X:649206-649281 8 8.5 6147 FBgn0025639 495.87 9.743333333 14.96 0.01714159 0.872391379 0.568181818 1 1 1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 649666 649671 - X_649666_649671_- 1 1 1 0 Hmt4-20 FBtr0070151|FBtr0070151|FBtr0070151|FBtr0308652|FBtr0308652|FBtr0308652 648481|648481|648481|648889|648889|648889 650049|650049|650049|650049|650049|650049 X - 649646 649688 5'utr Hmt4-20 FlyBase G63879.1 ATTTCTCTCTTTCTCTTTGTGATCACTTCCCGTTTCTCCCAAC 29 649672 0.728207661 4 25 348 0.909090909 1.176091259 0 0.137931034 0.242424242 29 2 1 30 X:649646-649688 6 Hmt4-20 FBtr0308652|FBtr0308652|FBtr0308652|FBtr0070151|FBtr0070151|FBtr0070151 648889|648889|648889|648481|648481|648481 650049|650049|650049|650049|650049|650049 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 649647 649683 5'utr Hmt4-20 FlyBase G48151.1 TCTCTTTCTCTTTGTGATCACTTCCCGTTTCTCCCAA 8 649672 0.671721366 4 6 95 0.8 0.903089987 0 0.125 0.3 8 2 0 8 X:649647-649683 6 17 6148 FBgn0025639 495.87 9.743333333 14.96 0.034283179 1.744782757 1.136363636 1 1 1 0.01 dme-bantam-3p 7mer-m8 TGATCTC X 650035 650041 - X_650035_650041_- 0.661615243 0.661615243 0.661615243 0 Hmt4-20 FBtr0070151|FBtr0308652 648481|648889 650049|650049 X - 649885 650065 stop_codon Hmt4-20 FlyBase G63880.2 TCACGGCCAGAAATAACCAACGACTGATCTCCAAGCAAATTGACTAAGCACAGTTGCCATTTCCATGAGAAGAGGAGGAGCGCGTAGGGGGAGAGTACCGGGCGAGGACATGGTGAAGCACCAGGTGCAGAGAAGCAGGAATAACAAGGGATGGAGACTGAGAATGGCTGCGCTGCTGGCG 112 650041 0.931338677 12 102 317 0.947368421 1.799340549 0.07518797 0.151785714 0.285714286 112 6 1 126 X:649885-650065 7 Hmt4-20 FBtr0308652|FBtr0070151 648889|648481 650049|650049 TGATCTC 7mer-m8 dme-bantam-3p X - 649971 650063 stop_codon Hmt4-20 FlyBase G48153.1 ACGGCCAGAAATAACCAACGACTGATCTCCAAGCAAATTGACTAAGCACAGTTGCCATTTCCATGAGAAGAGGAGGAGCGCGTAGGGGGAGAG 78 650041 0.847298196 9 70 228 0.860869565 1.694605199 0.060869565 0.333333333 0.547826087 78 15 1 99 X:649971-650063 7 74 6149 FBgn0025639 495.87 9.743333333 14.96 0.149232662 7.594936709 4.946524064 0 0 0 0.01 dme-miR-2a-2-5p 6mer2-7 GATGAG X 6530957 6530962 - X_6530957_6530962_- 1 1 1 0 RpL7A FBtr0343329 6530895 6531125 X - 6530933 6530985 3'utr RpL7A FlyBase G65191.1 AAGTGCCTGTGAGAGTGCTTTTGGATGAGTCGATGATTTGGCGTCGGCTTGGA 8 6530966 0.987310221 5 7 56 0.888888889 0.903089987 0.222222222 0.125 0.222222222 8 1 0 8 X:6530933-6530985 6 RpL7A FBtr0343329 6530895 6531125 GATGAG 6mer2-7 dme-miR-2a-2-5p X - 6530924 6530985 3'utr RpL7A FlyBase G49115.1 AAGTGCCTGTGAGAGTGCTTTTGGATGAGTCGATGATTTGGCGTCGGCTTGGATTCAATAAA 11 6530965 0.657050249 8 11 83 1 1.176091259 0.2 0.363636364 0.533333333 11 0 0 15 X:6530924-6530985 6 7.5 6150 FBgn0014026 13933.55333 1778.546667 2702.97 0.000538269 0.004216926 0.002774726 4 3 3.5 0.01 dme-miR-1006-3p 6mer2-7 GAATTT X 6531042 6531047 - X_6531042_6531047_- 1 1 1 0 RpL7A FBtr0343329 6530895 6531125 X - 6531015 6531299 stop_codon RpL7A FlyBase G65192.1 AACGACAAGGCCAACTTCGGCAAGGTCCTGGAGGCTGTGAAGACCAACTTCAACGAGCGCCACGAGGAGATCCGTCGCCACTGGGGCGGTGGTATCCTTGGCTCCAAGAGTCTGGCCCGCATCTCTAAGCTGGAGCGCGCCAAGGCACGCGAGCTTGCCCAGAAGCAGGGTTGATTCAATCTGAAGCCGGTCCGGTCCGATGGTGGAGACTTTTAAGTACACATGGATGAAATTAGTTGGGCCATGCTCACTGAATTTGATAACTAATAAACTTTTAAGTGTACA 1612 6531048 0.889814948 50 1575 11302 0.977074236 2.553883027 0.258187773 0.119727047 0.225436681 1612 38 4 1790 X:6531015-6531299 6 RpL7A FBtr0343329 6530895 6531125 GAATTT 6mer2-7 dme-miR-1006-3p X - 6531018 6531233 stop_codon RpL7A FlyBase G49116.1 GAGATCCGTCGCCACTGGGGCGGTGGTATCCTTGGCTCCAAGAGTCTGGCCCGCATCTCTAAGCTGGAGCGCGCCAAGGCACGCGAGCTTGCCCAGAAGCAGGGTTGATTCAATCTGAAGCCGGTCCGGTCCGATGGTGGAGACTTTTAAGTACACATGGATGAAATTAGTTGGGCCATGCTCACTGAATTTGATAACTAATAAACTTTTAAGTGT 649 6531048 0.837341731 40 635 4891 0.980827447 2.51054501 0.27346115 0.363636364 0.583249243 649 17 2 972 X:6531018-6531233 6 761.5 6151 FBgn0014026 13933.55333 1778.546667 2702.97 0.054652247 0.428158571 0.281727137 1 1 1 0.01 dme-miR-7-5p 7mer-A1 TCTTCCA X 6537461 6537467 + X_6537461_6537467_+ 0.823349562 0.823349562 0.823349562 0 dx FBtr0070914 6537377 6538575 X + 6537437 6537546 3'utr dx FlyBase G59218.1 CCACCGAAGTCCCCTCGATCATTCTCTTCCATTCGTCGTTAAGTTACTTTCTACATAATCTCAGTGTGTGTGCAATCCTCGTTTACTATGATATATTTTTTTTATAGATA 147 6537458 0.79244303 21 133 1425 0.901734104 1.716003344 0.248554913 0.136054422 0.265895954 147 15 2 156 X:6537437-6537546 7 dx FBtr0070914 6537377 6538575 TCTTCCA 7mer-A1 dme-miR-7-5p X + 6537441 6537534 3'utr dx FlyBase G44802.1 CGAAGTCCCCTCGATCATTCTCTTCCATTCGTCGTTAAGTTACTTTCTACATAATCTCAGTGTGTGTGCAATCCTCGTTTACTATGATATATTT 52 6537458 0.765246965 11 44 499 0.864864865 1.204119983 0.135135135 0.307692308 0.513513514 52 7 3 64 X:6537441-6537534 7 43.5 6152 FBgn0000524 299.9366667 9.43 14.42 0.145030618 4.612937434 3.016643551 3 3 3 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT X 6537707 6537712 + X_6537707_6537712_+ 0.999999909 1 0.999999954 7.07E-08 dx FBtr0070914 6537377 6538575 X + 6537658 6537803 3'utr dx FlyBase G59220.1 AGTTGGCGTACATCATATGTATTAGCTAGTTAGTTAGTTAGTTAGTTGTAGCTGTAGTTCCCAAGAGAATCTTGACCCAAGACACCTACTAGTATTAGGCATTATCCTGATTCTTGATTCCTGATTCGATTCAAGCCAAGCCAAGC 43 6537710 0.985747065 20 40 339 0.892857143 1.698970004 0.232142857 0.209302326 0.392857143 43 6 0 50 X:6537658-6537803 6 dx FBtr0070914 6537377 6538575 AGCTGT 6mer3-8 dme-miR-1008-3p X + 6537657 6537789 3'utr dx FlyBase G44805.1 AAGTTGGCGTACATCATATGTATTAGCTAGTTAGTTAGTTAGTTAGTTGTAGCTGTAGTTCCCAAGAGAATCTTGACCCAAGACACCTACTAGTATTAGGCATTATCCTGATTCTTGATTCCTGATTCGATTC 37 6537729 0.796674776 22 37 325 1 1.770852012 0.084745763 0.432432432 0.644067797 37 0 0 59 X:6537657-6537789 6 14.5 6153 FBgn0000524 299.9366667 9.43 14.42 0.048343539 1.537645811 1.00554785 -3 -22 -12.5 0.01 dme-miR-8-3p 7mer-A1 AGTATTA X 6537748 6537754 + X_6537748_6537754_+ 0.823349562 0.823349562 0.823349562 0 dx FBtr0070914 6537377 6538575 X + 6537658 6537803 3'utr dx FlyBase G59220.1 AGTTGGCGTACATCATATGTATTAGCTAGTTAGTTAGTTAGTTAGTTGTAGCTGTAGTTCCCAAGAGAATCTTGACCCAAGACACCTACTAGTATTAGGCATTATCCTGATTCTTGATTCCTGATTCGATTCAAGCCAAGCCAAGC 43 6537747 0.985747065 20 40 339 0.892857143 1.698970004 0.232142857 0.209302326 0.392857143 43 6 0 50 X:6537658-6537803 7 dx FBtr0070914 6537377 6538575 AGTATTA 7mer-A1 dme-miR-8-3p X + 6537657 6537789 3'utr dx FlyBase G44805.1 AAGTTGGCGTACATCATATGTATTAGCTAGTTAGTTAGTTAGTTAGTTGTAGCTGTAGTTCCCAAGAGAATCTTGACCCAAGACACCTACTAGTATTAGGCATTATCCTGATTCTTGATTCCTGATTCGATTC 37 6537729 0.796674776 22 37 325 1 1.770852012 0.084745763 0.432432432 0.644067797 37 0 0 59 X:6537657-6537789 7 11 6154 FBgn0000524 299.9366667 9.43 14.42 0.036674409 1.166489926 0.762829404 1 19 10 0.01 dme-miR-283-5p 6mer3-8 TGATAT X 6537869 6537874 + X_6537869_6537874_+ 1 1 1 0 dx FBtr0070914 6537377 6538575 X + 6537820 6537887 3'utr dx FlyBase G59221.1 AAGCTGTGCCAAAATCGTAGCGCTCCCGTTTATAGGATATGTATATTGTTGATATAGCTAGCTATAAC 39 6537865 0.992106411 8 35 381 0.9 1.556302501 0.275 0.025641026 0.05 39 4 0 36 X:6537820-6537887 6 dx FBtr0070914 6537377 6538575 TGATAT 6mer3-8 dme-miR-283-5p X + 6537847 6537912 3'utr dx FlyBase G44806.1 GTTTATAGGATATGTATATTGTTGATATAGCTAGCTATAACCATTGCCCATCTCTCCATCTCTCTC 25 6537865 0.749693173 5 22 250 0.914893617 1.156347201 0.170212766 0.52 0.744680851 25 2 2 43 X:6537847-6537912 6 27.5 6155 FBgn0000524 299.9366667 9.43 14.42 0.091686023 2.916224814 1.907073509 4 4 4 0.01 dme-miR-986-5p 6mer3-8 ATTCGA X 6538016 6538021 + X_6538016_6538021_+ 0.999946818 0.999927904 0.999937361 1.34E-05 dx FBtr0070914 6537377 6538575 X + 6537954 6538098 3'utr dx FlyBase G59222.1 CTTTATATCGGATTTATATAGGATTAAAATAGTATTTTGAGAGAGGAAATGGAGATGGGTAAATTCGATAGACTTGTCTCACTTGTCTTGGCCATTTAATCTCTTTCATTCAGCGAATTTGATGTGATTTTAATTTGAATTATTC 231 6538022 0.988029273 25 226 2057 0.985663082 2.138302698 0.064516129 0.16017316 0.304659498 231 3 1 275 X:6537954-6538098 6 dx FBtr0070914 6537377 6538575 ATTCGA 6mer3-8 dme-miR-986-5p X + 6538001 6538149 3'utr dx FlyBase G44807.2 AATGGAGATGGGTAAATTCGATAGACTTGTCTCACTTGTCTTGGCCATTTAATCTCTTTCATTCAGCGAATTTGATGTGATTTTAATTTGAATTATTCATTATTAAACGGAGCATTTAGGAAGCATAGTTGTAACGCAGCCAGATATTC 145 6538022 0.989176125 20 138 1336 0.958715596 2.320146286 0.02293578 0.344827586 0.564220183 145 9 0 209 X:6538001-6538149 6 72.5 6156 FBgn0000524 299.9366667 9.43 14.42 0.241717696 7.688229056 5.027739251 -6 -6 -6 0.01 dme-miR-308-3p 7mer-m1 TGTGATT X 6538076 6538082 + X_6538076_6538082_+ 0.443131018 0.443131018 0.443131018 0 dx FBtr0070914 6537377 6538575 X + 6537954 6538098 3'utr dx FlyBase G59222.1 CTTTATATCGGATTTATATAGGATTAAAATAGTATTTTGAGAGAGGAAATGGAGATGGGTAAATTCGATAGACTTGTCTCACTTGTCTTGGCCATTTAATCTCTTTCATTCAGCGAATTTGATGTGATTTTAATTTGAATTATTC 231 6538072 0.988029273 25 226 2057 0.985663082 2.138302698 0.064516129 0.16017316 0.304659498 231 3 1 275 X:6537954-6538098 7 dx FBtr0070914 6537377 6538575 TGTGATT 7mer-m1 dme-miR-308-3p X + 6538001 6538149 3'utr dx FlyBase G44807.2 AATGGAGATGGGTAAATTCGATAGACTTGTCTCACTTGTCTTGGCCATTTAATCTCTTTCATTCAGCGAATTTGATGTGATTTTAATTTGAATTATTCATTATTAAACGGAGCATTTAGGAAGCATAGTTGTAACGCAGCCAGATATTC 145 6538072 0.989176125 20 138 1336 0.958715596 2.320146286 0.02293578 0.344827586 0.564220183 145 9 0 209 X:6538001-6538149 7 96 6157 FBgn0000524 299.9366667 9.43 14.42 0.32006757 10.18027572 6.65742025 4 4 4 0.01 dme-miR-283-5p 6mer3-8 TGATAT X 6538288 6538293 + X_6538288_6538293_+ 1 1 1 0 dx FBtr0070914 6537377 6538575 X + 6538262 6538400 3'utr dx FlyBase G59224.1 CATTTGATGAATTGTTGCTTTCATATTGATATCATCGAGCATCGAACGAACTATCGTATACATCGCCAATATATAGCATATATAGCATATAGTATGTAGAGATCGTACGGACAGCTAGCGGCTACTGACCGCGCCACCA 457 6538287 0.930153984 18 439 3774 0.96 2.225309282 0.352380952 0.115973742 0.23047619 457 19 2 504 X:6538262-6538400 6 dx FBtr0070914 6537377 6538575 TGATAT 6mer3-8 dme-miR-283-5p X + 6538267 6538400 3'utr dx FlyBase G44808.1 GATGAATTGTTGCTTTCATATTGATATCATCGAGCATCGAACGAACTATCGTATACATCGCCAATATATAGCATATATAGCATATAGTATGTAGAGATCGTACGGACAGCTAGCGGCTACTGACCGCGCCACCA 197 6538287 0.985927204 15 187 1569 0.965034965 2.139879086 0.395104895 0.324873096 0.534965035 197 9 1 276 X:6538267-6538400 6 226 6158 FBgn0000524 299.9366667 9.43 14.42 0.753492404 23.96606575 15.67267684 1 1 1 0.01 dme-miR-1006-3p 6mer3-8 CGAATT X 657654 657659 + X_657654_657659_+ 0.507200502 0.507200502 0.507200502 0 SkpA FBtr0345314|FBtr0070128|FBtr0100530|FBtr0070123|FBtr0070126|FBtr0070124|FBtr0070129|FBtr0070125|FBtr0070127 657597|657597|657597|657597|657597|657597|657597|657597|657597 657899|657899|657899|657899|657899|657899|657899|657899|657899 X + 657599 657692 3'utr SkpA FlyBase G57833.1 AGCGCGGCATTTCGCGGGACCAACATTAAGTTGAAACAGCTAGGGGATTCGGGAACGAATTGGATTTGCAGCATTGCAACTTTACTTAGTTGCT 41 657664 0.920897694 15 40 262 1 1.653212514 0.111111111 0.073170732 0.155555556 41 0 0 45 X:657599-657692 6 SkpA FBtr0070126|FBtr0070129|FBtr0070124|FBtr0070125|FBtr0070127|FBtr0345314|FBtr0070128|FBtr0100530|FBtr0070123 657597|657597|657597|657597|657597|657597|657597|657597|657597 657899|657899|657899|657899|657899|657899|657899|657899|657899 CGAATT 6mer3-8 dme-miR-1006-3p X + 657618 657693 3'utr SkpA FlyBase G43751.1 CCAACATTAAGTTGAAACAGCTAGGGGATTCGGGAACGAATTGGATTTGCAGCATTGCAACTTTACTTAGTTGCTA 49 657663 0.860976914 14 47 316 0.955882353 1.511883361 0.102941176 0.285714286 0.485294118 49 2 1 65 X:657618-657693 6 37 6159 FBgn0025637 1511.546667 228.32 348.46 0.024478239 0.162053259 0.106181484 -10 -9 -9.5 0.01 dme-bantam-3p 6mer3-8 TGATCT X 657757 657762 + X_657757_657762_+ 1 1 1 0 SkpA FBtr0345314|FBtr0070128|FBtr0100530|FBtr0070123|FBtr0070126|FBtr0070124|FBtr0070129|FBtr0070125|FBtr0070127 657597|657597|657597|657597|657597|657597|657597|657597|657597 657899|657899|657899|657899|657899|657899|657899|657899|657899 X + 657709 657782 3'utr SkpA FlyBase G57834.1 TTTTTTATTTTTAACCCCAGCAGAGACTCGATTTAAATTGTGTATAAATGATCTGTTGCTGATTTGATTCGCGG 24 657746 0.881938661 8 23 225 0.923076923 0.903089987 0.307692308 0.083333333 0.153846154 24 0 2 24 X:657709-657782 6 SkpA FBtr0070126|FBtr0070129|FBtr0070124|FBtr0070125|FBtr0070127|FBtr0345314|FBtr0070128|FBtr0100530|FBtr0070123 657597|657597|657597|657597|657597|657597|657597|657597|657597 657899|657899|657899|657899|657899|657899|657899|657899|657899 TGATCT 6mer3-8 dme-bantam-3p X + 657719 657785 3'utr SkpA FlyBase G43752.1 TTAACCCCAGCAGAGACTCGATTTAAATTGTGTATAAATGATCTGTTGCTGATTTGATTCGCGGGGT 21 657746 0.986149737 8 20 170 0.967741935 1.477121255 0.225806452 0.285714286 0.516129032 21 1 0 30 X:657719-657785 6 17 6160 FBgn0025637 1511.546667 228.32 348.46 0.011246758 0.074456903 0.048786087 11 11 11 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC X 6596122 6596128 + X_6596122_6596128_+ 0.661615645 0.661615645 0.661615645 0 Pat1 FBtr0331600|FBtr0070945|FBtr0331599 6595666|6595666|6595666 6596954|6596954|6596630 X + 6596053 6596273 3'utr Pat1 FlyBase G59243.1 AGTTATAACCGAACTACTATACGTATTACATCGTAACGAGAGTGTGGGTCAGCTCAGCAAATTTTTCACTGTGTTCCAGTCATCATCGAATACGTCCAGTACCCCTAGTTCCCGAAGTTTTCAAGGATGCCAAGTCCAGTTTTTTCAGTCAGATAGACCTAGGCTAAGATGTAGTAGTATTGTTGGAGCTTCGGTTAACCGCTTAATCGGGAGATCGTTGA 175 6596151 0.986930285 28 139 1205 0.810945274 1.133006358 0.199004975 0.12 0.233830846 175 27 11 163 X:6596053-6596273 7 Pat1 FBtr0331600|FBtr0070945|FBtr0331599 6595666|6595666|6595666 6596954|6596954|6596630 TGTGTTC 7mer-m8 dme-miR-317-3p X + 6596059 6596184 3'utr Pat1 FlyBase G44824.1 AACCGAACTACTATACGTATTACATCGTAACGAGAGTGTGGGTCAGCTCAGCAAATTTTTCACTGTGTTCCAGTCATCATCGAATACGTCCAGTACCCCTAGTTCCCGAAGTTTTCAAGGATGCCA 89 6596151 0.985205568 16 68 561 0.780487805 0.982271233 0.300813008 0.303370787 0.495934959 89 18 9 96 X:6596059-6596184 7 45 6161 FBgn0029878 899.4033333 29.25 44.72333333 0.05003317 1.538461538 1.006186182 -29 -29 -29 0.01 dme-miR-305-5p 7mer-A1 GTACAAA X 6596337 6596343 + X_6596337_6596343_+ 0.782911824 0.782911824 0.782911824 0 Pat1 FBtr0331600|FBtr0070945|FBtr0331599 6595666|6595666|6595666 6596954|6596954|6596630 X + 6596301 6596340 3'utr Pat1 FlyBase G59244.1 AATATATATTGTAATATTCCCCGCGTTTTGTTCCATGTAC 14 6596329 0.65480066 5 14 129 1 1.230448921 0.117647059 0.214285714 0.352941176 14 0 0 17 X:6596301-6596340 4 Pat1 FBtr0331600|FBtr0070945|FBtr0331599 6595666|6595666|6595666 6596954|6596954|6596630 GTACAAA 7mer-A1 dme-miR-305-5p X + 6596300 6596345 3'utr Pat1 FlyBase G44825.1 TAATATATATTGTAATATTCCCCGCGTTTTGTTCCATGTACAAATG 7 6596329 0.991458646 4 7 69 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 X:6596300-6596345 7 8.5 6162 FBgn0029878 899.4033333 29.25 44.72333333 0.00945071 0.290598291 0.19005739 8 8 8 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA X 6596532 6596537 + X_6596532_6596537_+ 1 1 1 0 Pat1 FBtr0331600|FBtr0070945|FBtr0331599 6595666|6595666|6595666 6596954|6596954|6596630 X + 6596512 6596555 3'utr Pat1 FlyBase G59246.1 AAGATTTAAAGTTGTATAGAGTGCAAGAAGTATGCCCATTGTAT 5 6596528 0.973416598 2 5 32 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 X:6596512-6596555 6 Pat1 FBtr0331600|FBtr0070945|FBtr0331599 6595666|6595666|6595666 6596954|6596954|6596630 GTGCAA 6mer3-8 dme-miR-92b-3p X + 6596512 6596565 3'utr Pat1 FlyBase G44827.1 AAGATTTAAAGTTGTATAGAGTGCAAGAAGTATGCCCATTGTATAGTCTAAGTC 9 6596544 0.981941051 4 7 54 0.916666667 1.041392685 0.25 0.333333333 0.5 9 1 0 11 X:6596512-6596565 6 5 6163 FBgn0029878 899.4033333 29.25 44.72333333 0.005559241 0.170940171 0.111798465 4 -12 -4 0.01 dme-miR-932-5p 7mer-m8 GGAATTG X 6650575 6650581 + X_6650575_6650581_+ 0.70297287 0.70297287 0.70297287 0 pigs FBtr0308653|FBtr0343375|FBtr0070948 6650412|6650412|6650412 6653015|6653015|6652098 X + 6650536 6650611 3'utr pigs FlyBase G59272.1 GTGGGTAGTGAATAGTTAAGATAGGATTAGAGCCAAGCTGGAATTGTCTGCTGCTGCTACGGCGTGTGTGTGTGCG 128 6650574 0.936510671 16 99 899 0.787671233 1.583576586 0.226027397 0.1328125 0.239726027 128 29 2 115 X:6650536-6650611 7 pigs FBtr0308653|FBtr0343375|FBtr0070948 6650412|6650412|6650412 6653015|6653015|6652098 GGAATTG 7mer-m8 dme-miR-932-5p X + 6650534 6650600 3'utr pigs FlyBase G44847.1 TTGTGGGTAGTGAATAGTTAAGATAGGATTAGAGCCAAGCTGGAATTGTCTGCTGCTGCTACGGCGT 87 6650574 0.937648929 15 67 573 0.774193548 1.681241237 0.25 0.287356322 0.5 87 27 1 96 X:6650534-6650600 7 58 6164 FBgn0029881 6856.753333 130.81 200.9766667 0.008458814 0.443391178 0.288590715 1 1 1 0.01 dme-miR-8-3p 6mer3-8 CAGTAT X 6651675 6651680 + X_6651675_6651680_+ 1 1 1 0 pigs FBtr0308653|FBtr0343375|FBtr0070948 6650412|6650412|6650412 6653015|6653015|6652098 X + 6651485 6651697 3'utr pigs FlyBase G59274.1 TACGATCGCAAACACATAGAGGACGCATACCTAGTTTTCTAGAAATTTTTAAAGTAAAGCCAACAAAATTCTTCAGATTCGATTTGTAGCGATGCAGAGAATACGTTTATTTTTGTACGCTTGAACAGAGGAACCGGCGGAGATCGTGGGATCTGGAAAGATGAATAGCTTTTAGACAACTCGACTTTTACAGTATAGCTCTATATATATATG 77 6651672 0.983949203 19 74 571 0.97 1.685741739 0.09 0.220779221 0.4 77 2 1 97 X:6651485-6651697 6 pigs FBtr0308653|FBtr0343375|FBtr0070948 6650412|6650412|6650412 6653015|6653015|6652098 CAGTAT 6mer3-8 dme-miR-8-3p X + 6651598 6651701 3'utr pigs FlyBase G44848.1 TGTACGCTTGAACAGAGGAACCGGCGGAGATCGTGGGATCTGGAAAGATGAATAGCTTTTAGACAACTCGACTTTTACAGTATAGCTCTATATATATATGTATA 43 6651672 0.980874827 12 42 303 0.933333333 1.748188027 0.183333333 0.279069767 0.483333333 43 4 0 56 X:6651598-6651701 6 38.5 6165 FBgn0029881 6856.753333 130.81 200.9766667 0.005614902 0.294320006 0.191564527 3 3 3 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 6652316 6652321 + X_6652316_6652321_+ 1 1 1 0 pigs FBtr0308653|FBtr0343375 6650412|6650412 6653015|6653015 X + 6652220 6652500 3'utr pigs FlyBase G59280.1 TAACTACAACTATTAAACATTTATTGTATGATTTCATTCTTTTTTTTTTTTTTGTTTCTTTAGATTTAGCAATGTTAACATATAGTTTAGTACATCGTACCTATGCATATAAATTACATACATCATATATAGATTGTAAATTGTGTTTGTCCAATTGCCCACATGTTGTATAGTTCTTATGTACTCGTAAAATCGGCCTTAATGTTCAGTCTGTCGATATCTTGTATCAGTTTCATTTTGTATTCTTTTCTTATCATTATAATTTGTATTTTGAATTTAAG 233 6652323 0.988872396 39 222 2101 0.949090909 1.939519253 0.04 0.154506438 0.283636364 233 12 2 261 X:6652220-6652500 6 pigs FBtr0308653|FBtr0343375 6650412|6650412 6653015|6653015 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X + 6652290 6652440 3'utr pigs FlyBase G44853.1 AATGTTAACATATAGTTTAGTACATCGTACCTATGCATATAAATTACATACATCATATATAGATTGTAAATTGTGTTTGTCCAATTGCCCACATGTTGTATAGTTCTTATGTACTCGTAAAATCGGCCTTAATGTTCAGTCTGTCGATATC 159 6652323 0.850347378 26 147 1313 0.946721311 2.36361198 0.032786885 0.402515723 0.610655738 159 13 0 231 X:6652290-6652440 6 154 6166 FBgn0029881 6856.753333 130.81 200.9766667 0.022459609 1.177280024 0.766258106 -7 -7 -7 0.01 dme-miR-2a-2-5p 7mer-m8 TGATGAG X 6652804 6652810 + X_6652804_6652810_+ 0.658999343 0.658999343 0.658999343 0 pigs FBtr0308653|FBtr0343375 6650412|6650412 6653015|6653015 X + 6652705 6652813 3'utr pigs FlyBase G59281.1 AGAAAATTAAGCAATTGCCCGATTTGCATGCCAAAAGGTTGATAAGAAATCGAGCAAAAAACAAGATGAAGTGCACCACGGGTTCTCGAGCGCTGGCCATGATGAGCAT 15 6652799 0.969187036 7 12 60 0.8125 1.113943352 0.3125 0.066666667 0.125 15 3 0 13 X:6652705-6652813 7 pigs FBtr0308653|FBtr0343375 6650412|6650412 6653015|6653015 TGATGAG 7mer-m8 dme-miR-2a-2-5p X + 6652767 6652812 3'utr pigs FlyBase G44855.1 AAGATGAAGTGCACCACGGGTTCTCGAGCGCTGGCCATGATGAGCA 7 6652806 0.760593471 5 6 23 0.941176471 1.204119983 0.176470588 0.714285714 0.882352941 7 1 0 16 X:6652767-6652812 7 5 6167 FBgn0029881 6856.753333 130.81 200.9766667 0.000729208 0.038223377 0.02487851 5 -2 1.5 0.01 dme-miR-988-3p 6mer2-7 CAAGGG X 6652962 6652967 + X_6652962_6652967_+ 1 1 1 0 pigs FBtr0308653|FBtr0343375 6650412|6650412 6653015|6653015 X + 6652930 6653027 3'utr pigs FlyBase G59282.1 ACTAACTATTACAAATGGAATAGATTAGACCGCAAGGGTGTACTCTAAGCGACGAGCAGCATAATTGATTTTAATCACAAGAATTTAATTAATTAAAT 26 6652991 0.981568793 12 20 144 0.78125 1.096910013 0.25 0.230769231 0.375 26 6 1 25 X:6652930-6653027 6 pigs FBtr0308653|FBtr0343375 6650412|6650412 6653015|6653015 CAAGGG 6mer2-7 dme-miR-988-3p X + 6652933 6653000 3'utr pigs FlyBase G44856.1 AACTATTACAAATGGAATAGATTAGACCGCAAGGGTGTACTCTAAGCGACGAGCAGCATAATTGATTT 8 6652954 0.95399087 6 8 43 1 1.146128036 0.571428571 0.5 0.714285714 8 0 0 14 X:6652933-6653000 6 8 6168 FBgn0029881 6856.753333 130.81 200.9766667 0.001166733 0.061157404 0.039805616 -29 8 -10.5 0.01 dme-miR-33-5p 6mer3-8 CAATGC X 6659304 6659309 + X_6659304_6659309_+ 1 1 1 0 l(1)G0148 FBtr0343377|FBtr0070950 6659154|6659154 6659709|6659709 X + 6659262 6659348 3'utr l(1)G0148 FlyBase G59292.1 AGCATATCTCATTATTGCACCCAGAGCCAGAAGAAACTCGTCCAATGCCCCACTAGGCCACATTTACTTACCTCAAGCCGCAGGCAG 26 6659307 0.949235065 6 23 102 0.875 1.447158031 0.09375 0.192307692 0.34375 26 4 0 28 X:6659262-6659348 6 l(1)G0148 FBtr0070950|FBtr0343377 6659154|6659154 6659709|6659709 CAATGC 6mer3-8 dme-miR-33-5p X + 6659259 6659347 3'utr l(1)G0148 FlyBase G44862.1 AAGAGCATATCTCATTATTGCACCCAGAGCCAGAAGAAACTCGTCCAATGCCCCACTAGGCCACATTTACTTACCTCAAGCCGCAGGCA 12 6659307 0.954349558 5 11 52 0.944444444 1.230448921 0.111111111 0.333333333 0.555555556 12 1 0 17 X:6659259-6659347 6 14 6169 FBgn0028360 627.0766667 25.24 38.74333333 0.022325819 0.554675119 0.361352491 -3 -3 -3 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 6659456 6659461 + X_6659456_6659461_+ 1 1 1 0 l(1)G0148 FBtr0343377|FBtr0070950 6659154|6659154 6659709|6659709 X + 6659434 6659514 3'utr l(1)G0148 FlyBase G59293.1 ATGAACAAAATGGGCAAGGAATACCAAAAAAGCAAACGAGGAGAGATTGATTATGAAATATTGTGGCCGAAAGGCTACAAA 269 6659480 0.993519929 10 264 796 0.984177215 1.714609139 0.082278481 0.156133829 0.28164557 269 0 5 311 X:6659434-6659514 6 l(1)G0148 FBtr0070950|FBtr0343377 6659154|6659154 6659709|6659709 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 6659439 6659520 3'utr l(1)G0148 FlyBase G44863.1 CAAAATGGGCAAGGAATACCAAAAAAGCAAACGAGGAGAGATTGATTATGAAATATTGTGGCCGAAAGGCTACAAAATGTTG 144 6659480 0.993904911 12 142 409 0.985645933 2.31386722 0.105263158 0.298611111 0.516746411 144 3 0 206 X:6659439-6659520 6 73.5 6170 FBgn0028360 627.0766667 25.24 38.74333333 0.117210548 2.912044374 1.897100576 -24 -24 -24 0.01 dme-miR-304-5p 6mer2-7 GAGATT X 6659476 6659481 + X_6659476_6659481_+ 1 1 1 0 l(1)G0148 FBtr0343377|FBtr0070950 6659154|6659154 6659709|6659709 X + 6659434 6659514 3'utr l(1)G0148 FlyBase G59293.1 ATGAACAAAATGGGCAAGGAATACCAAAAAAGCAAACGAGGAGAGATTGATTATGAAATATTGTGGCCGAAAGGCTACAAA 269 6659480 0.993519929 10 264 796 0.984177215 1.714609139 0.082278481 0.156133829 0.28164557 269 0 5 311 X:6659434-6659514 6 l(1)G0148 FBtr0070950|FBtr0343377 6659154|6659154 6659709|6659709 GAGATT 6mer2-7 dme-miR-304-5p X + 6659439 6659520 3'utr l(1)G0148 FlyBase G44863.1 CAAAATGGGCAAGGAATACCAAAAAAGCAAACGAGGAGAGATTGATTATGAAATATTGTGGCCGAAAGGCTACAAAATGTTG 144 6659480 0.993904911 12 142 409 0.985645933 2.31386722 0.105263158 0.298611111 0.516746411 144 3 0 206 X:6659439-6659520 6 107.5 6171 FBgn0028360 627.0766667 25.24 38.74333333 0.171430394 4.25911252 2.774670911 -4 -4 -4 0.01 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA X 6667159 6667166 + X_6667159_6667166_+ 0.625364009 0.625364009 0.625364009 0 Ctr1A FBtr0070951|FBtr0308593|FBtr0308592|FBtr0308594 6667050|6667050|6667050|6667050 6668258|6667628|6667628|6667628 X + 6667112 6667188 3'utr Ctr1A FlyBase G59297.1 GAGGCGTTGGAGGAGCAAATGTCCATCTGAATGAAAGGCAGAGGCATTGGTGCTAAGCTGGGAATCCCAGGAAGCTC 252 6667158 0.949332518 4 249 1079 0.992831541 2.141449773 0.35483871 0.083333333 0.172043011 252 1 1 277 X:6667112-6667188 8 Ctr1A FBtr0308594|FBtr0308592|FBtr0308593|FBtr0070951 6667050|6667050|6667050|6667050 6667628|6667628|6667628|6668258 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" X + 6667138 6667189 3'utr Ctr1A FlyBase G44866.1 CTGAATGAAAGGCAGAGGCATTGGTGCTAAGCTGGGAATCCCAGGAAGCTCT 133 6667158 0.884878544 3 131 561 0.985148515 1.997823081 0.292079208 0.37593985 0.589108911 133 2 1 199 X:6667138-6667189 8 190 6172 FBgn0062413 431.6666667 29.72666667 45.48333333 0.44015444 6.391567616 4.177354342 1 1 1 0.01 dme-miR-283-5p 7mer-A1 GATATTA X 6668129 6668135 + X_6668129_6668135_+ 0.782911824 0.782911824 0.782911824 0 Ctr1A FBtr0070951 6667050 6668258 X + 6668107 6668167 3'utr Ctr1A FlyBase G59299.1 AAGTGCGTAAATAGATGTTGTAGATATTAAACTTAATGCAAATACATACAGTAAAGCGACA 44 6668124 0.989322577 6 43 415 1 1.69019608 0.306122449 0.113636364 0.204081633 44 0 0 49 X:6668107-6668167 7 Ctr1A FBtr0070951 6667050 6668258 GATATTA 7mer-A1 dme-miR-283-5p X + 6668115 6668146 3'utr Ctr1A FlyBase G44867.1 AAATAGATGTTGTAGATATTAAACTTAATGCA 13 6668124 0.733310588 5 13 121 1 1.301029996 0.15 0.230769231 0.5 13 0 0 20 X:6668115-6668146 7 27.5 6173 FBgn0062413 431.6666667 29.72666667 45.48333333 0.063706564 0.925095313 0.604617076 5 5 5 0.01 dme-miR-7-5p 6mer2-7 TCTTCC X 6668833 6668838 - X_6668833_6668838_- 1 1 1 0 CG3198 FBtr0070991 6668537 6671982 X - 6668821 6668861 3'utr CG3198 FlyBase G65212.1 CCTTTTCCTGCGAGGAACACACCTCTTCCCTGCCAGCATCC 9 6668836 0.774177435 2 9 67 1 1 0 0.111111111 0.2 9 0 0 10 X:6668821-6668861 6 CG3198 FBtr0070991 6668537 6671982 TCTTCC 6mer2-7 dme-miR-7-5p X - 6668812 6668861 3'utr CG3198 FlyBase G49129.1 CCTTTTCCTGCGAGGAACACACCTCTTCCCTGCCAGCATCCCAGATCCCA 9 6668836 0.98686808 3 7 52 0.785714286 1.041392685 0 0.333333333 0.571428571 9 3 0 11 X:6668812-6668861 6 7.5 6174 FBgn0029887 782.61 18.86666667 28.88333333 0.009583317 0.397526502 0.25966532 -2 -2 -2 0.01 dme-miR-11-3p 7mer-m1 TGTGATG X 6669798 6669804 - X_6669798_6669804_- 0.612071121 0.612071121 0.612071121 0 CG3198 FBtr0070991 6668537 6671982 X - 6669789 6669918 3'utr CG3198 FlyBase G65217.2 ATGTATGTTCATGTTCCCCCCTCCTCTTCACCAACAGGTAAATTGCGACTGAACCCGACCCCATAAAAATTATGATACTGATATTTGATATCGATCTCGATTAAATCGAATTTTTGTGATGTGACGAGAT 54 6669805 0.971146207 19 49 371 0.933333333 1.146128036 0.15 0.111111111 0.2 54 1 3 56 X:6669789-6669918 7 CG3198 FBtr0070991 6668537 6671982 TGTGATG 7mer-m1 dme-miR-11-3p X - 6669789 6669914 3'utr CG3198 FlyBase G49132.1 ATGTTCATGTTCCCCCCTCCTCTTCACCAACAGGTAAATTGCGACTGAACCCGACCCCATAAAAATTATGATACTGATATTTGATATCGATCTCGATTAAATCGAATTTTTGTGATGTGACGAGAT 33 6669806 0.80084011 14 32 231 0.941176471 1.079181246 0.176470588 0.393939394 0.607843137 33 0 3 48 X:6669789-6669914 7 19.5 6175 FBgn0029887 782.61 18.86666667 28.88333333 0.024916625 1.033568905 0.675129833 1 2 1.5 0.01 dme-miR-7-5p 6mer3-8 GTCTTC X 6671778 6671783 - X_6671778_6671783_- 0.999999993 1 0.999999997 0 CG3198 FBtr0070991 6668537 6671982 X - 6671776 6671809 3'utr CG3198 FlyBase G65220.1 AATCTCTCGACCATCTGCGATCTTCAGTCTTCGT 10 6671796 0.796124133 3 9 69 0.916666667 1.041392685 0 0.1 0.25 10 1 0 11 X:6671776-6671809 6 CG3198 FBtr0070991 6668537 6671982 GTCTTC 6mer3-8 dme-miR-7-5p X - 6671779 6671809 3'utr CG3198 FlyBase G49135.1 AATCTCTCGACCATCTGCGATCTTCAGTCTT 11 6671796 0.801914435 3 11 73 1 1.113943352 0.153846154 0.181818182 0.307692308 11 0 0 13 X:6671779-6671809 4 3.5 6176 FBgn0029887 782.61 18.86666667 28.88333333 0.004472215 0.185512367 0.121177149 13 13 13 0.01 dme-miR-308-3p 7mer-m1 TGTGATT X 6681764 6681770 + X_6681764_6681770_+ 0.521223855 0.521223855 0.521223855 0 l(1)G0255 FBtr0070954|FBtr0070953 6681698|6681698 6681845|6681845 X + 6681740 6681796 5'utr l(1)G0255 FlyBase G59329.1 TCATCGCTGTCATCGGAATCGCAGTGTGATTTTCTAGATCAGATCGTTTTGTTGTAT 47 6681771 0.705869626 4 45 410 0.98245614 1.748188027 0.035087719 0.191489362 0.333333333 47 1 0 56 X:6681740-6681796 7 l(1)G0255 FBtr0070953|FBtr0070954 6681698|6681698 6681845|6681845 TGTGATT 7mer-m1 dme-miR-308-3p X + 6681743 6681791 5'utr l(1)G0255 FlyBase G44891.1 TCGCTGTCATCGGAATCGCAGTGTGATTTTCTAGATCAGATCGTTTTGT 32 6681770 0.664938564 7 32 255 1 1.653212514 0.177777778 0.3125 0.511111111 32 0 0 45 X:6681743-6681791 7 38.5 6177 FBgn0028336 742.12 52.61 80.51333333 0.051878402 0.731800038 0.478181668 -7 -6 -6.5 0.01 dme-miR-980-3p 7mer-A1 GCAGCTA X 6689439 6689445 - X_6689439_6689445_- 0.823343962 0.823334296 0.823339129 6.86E-06 CG14442 FBtr0070988|FBtr0339493|FBtr0300772|FBtr0339491 6689294|6689318|6689318|6689318 6689803|6689803|6689803|6689803 X - 6689341 6689497 3'utr CG14442 FlyBase G65234.1 AAATGAAATGAAACACTGTGACGCCCCGAAAGCCACTGAAAATCGAAGAAATGCAGCTAAAATAAAAAGATAACTACGATCGATGGTGGAGATCCAACTAAACCTAATCCAGAATATGTAGCGCGTAAACAGAGCACTAAGTAGTTGTATGTATTAA 95 6689446 0.956170855 14 93 311 0.983193277 1.591064607 0.201680672 0.189473684 0.352941176 95 0 2 117 X:6689341-6689497 7 CG14442 FBtr0339491|FBtr0300772|FBtr0339493|FBtr0070988 6689318|6689318|6689318|6689294 6689803|6689803|6689803|6689803 GCAGCTA 7mer-A1 dme-miR-980-3p X - 6689390 6689484 3'utr CG14442 FlyBase G49142.1 CACTGTGACGCCCCGAAAGCCACTGAAAATCGAAGAAATGCAGCTAAAATAAAAAGATAACTACGATCGATGGTGGAGATCCAACTAAACCTAAT 62 6689446 0.957393786 8 62 187 1 1.886490725 0.168831169 0.209677419 0.363636364 62 0 0 77 X:6689390-6689484 7 50 6178 FBgn0029893 971.2033333 28.72 44.23333333 0.051482525 1.740947075 1.130369254 1 1 1 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 6696116 6696122 - X_6696116_6696122_- 0.661615511 0.661615511 0.661615511 0 CG14440 FBtr0070987 6695864 6697328 X - 6696088 6696143 3'utr CG14440 FlyBase G65246.1 AATAAAGTGTAACCATTAAGTTCTAGTCGAAATTTCAAATTGTTTTTCTCCTGTCT 34 6696123 0.981979081 3 34 259 1 1.568201724 0.135135135 0.088235294 0.162162162 34 0 0 37 X:6696088-6696143 7 CG14440 FBtr0070987 6695864 6697328 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X - 6696108 6696143 3'utr CG14440 FlyBase G49150.1 AATAAAGTGTAACCATTAAGTTCTAGTCGAAATTTC 14 6696123 0.719570925 2 13 101 0.727272727 1.204119983 0 0.285714286 0.545454545 14 6 0 16 X:6696108-6696143 7 23.5 6179 FBgn0029894 265.63 13.82333333 21.15 0.088468923 1.700024114 1.111111111 1 1 1 0.01 dme-miR-980-3p 6mer3-8 GGCAGC X 6697074 6697079 - X_6697074_6697079_- 1 1 1 0 CG14440 FBtr0070987|FBtr0310419 6695864|6696764 6697328|6697328 X - 6697041 6697099 3'utr CG14440 FlyBase G65249.1 TGAGGACTTGCAAATGAATGGGCAGCAGGCACTCTAGGATTAAAGCCAGGCAATTTTTT 24 6697081 0.959687632 6 21 102 0.866666667 1.113943352 0.233333333 0.25 0.4 24 3 1 26 X:6697041-6697099 6 CG14440 FBtr0310419|FBtr0070987 6696764|6695864 6697328|6697328 GGCAGC 6mer3-8 dme-miR-980-3p X - 6697054 6697099 3'utr CG14440 FlyBase G49152.1 TGAGGACTTGCAAATGAATGGGCAGCAGGCACTCTAGGATTAAAGC 10 6697082 0.868282228 2 10 36 1 1.113943352 0.307692308 0.2 0.384615385 10 0 0 13 X:6697054-6697099 6 15 6180 FBgn0029894 265.63 13.82333333 21.15 0.056469525 1.085121775 0.709219858 2 3 2.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC X 6721473 6721478 - X_6721473_6721478_- 1 1 1 0 CG3168 FBtr0340265|FBtr0070984|FBtr0340267|FBtr0340266|FBtr0070986|FBtr0070985|FBtr0340268 6720473|6720473|6720473|6720473|6720473|6720473|6720002 6721551|6721551|6721551|6721551|6721551|6721551|6721551 X - 6721452 6721502 3'utr CG3168 FlyBase G65255.1 CCATAGAATCTTCTGCTTTAACTGCTAGTCTGCAAGGTCTTGTTTCGAGTC 11 6721488 0.742662216 5 9 95 0.8125 1.113943352 0.125 0.454545455 0.625 11 3 0 13 X:6721452-6721502 6 CG3168 FBtr0070985|FBtr0340268|FBtr0340266|FBtr0070986|FBtr0340267|FBtr0340265|FBtr0070984 6720473|6720002|6720473|6720473|6720473|6720473|6720473 6721551|6721551|6721551|6721551|6721551|6721551|6721551 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" X - 6721441 6721488 3'utr CG3168 FlyBase G49156.1 GCTTTAACTGCTAGTCTGCAAGGTCTTGTTTCGAGTCATGATACTATG 6 6721472 0.985759735 3 4 41 1 0.954242509 0.666666667 0.5 0.666666667 6 0 0 9 X:6721441-6721488 6 6 6181 FBgn0029896 793.0366667 27.79 42.01333333 0.007565854 0.215905002 0.142811806 10 -6 2 0.01 dme-miR-317-3p 6mer3-8 TGTGTT X 6780948 6780953 - X_6780948_6780953_- 1 1 1 0 C3G FBtr0340087|FBtr0299791 6780788|6780788 6782353|6782353 X - 6780913 6780990 3'utr C3G FlyBase G65272.1 TTTTTGCTGCTGCTTCCGCTGCCGCTGGCGCATCAATTGTGTTTACTAAGCTAACGAACCTAGGGACAACAATTTATT 14 6780954 0.986268894 6 14 122 1 1.230448921 0.176470588 0.214285714 0.352941176 14 0 0 17 X:6780913-6780990 6 C3G FBtr0299791|FBtr0340087 6780788|6780788 6782353|6782353 TGTGTT 6mer3-8 dme-miR-317-3p X - 6780944 6780986 3'utr C3G FlyBase G49168.1 TGCTGCTGCTTCCGCTGCCGCTGGCGCATCAATTGTGTTTACT 9 6780954 0.984394933 4 9 69 1 1.176091259 0.266666667 0.333333333 0.6 9 0 0 15 X:6780944-6780986 6 8.5 6182 FBgn0259228 1638.55 32.65333333 50.12 0.005187513 0.260310331 0.169592977 1 1 1 0.01 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA X 6781079 6781086 - X_6781079_6781086_- 0.627007348 0.627007348 0.627007348 0 C3G FBtr0340087|FBtr0299791 6780788|6780788 6782353|6782353 X - 6781048 6781108 3'utr C3G FlyBase G65273.1 AACAGAAAAAAAGGCTGCTTACTTGAAGAATTTAATTCCCGATCACCATAGCCATTTTAAT 11 6781090 0.953142618 4 11 55 1 1.176091259 0.066666667 0.363636364 0.533333333 11 0 0 15 X:6781048-6781108 8 C3G FBtr0299791|FBtr0340087 6780788|6780788 6782353|6782353 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p X - 6781064 6781107 3'utr C3G FlyBase G49169.1 ACAGAAAAAAAGGCTGCTTACTTGAAGAATTTAATTCCCGATCA 9 6781089 0.943563448 3 9 38 1 1.176091259 0 0.333333333 0.6 9 0 0 15 X:6781064-6781107 8 9 6183 FBgn0259228 1638.55 32.65333333 50.12 0.005492661 0.275622703 0.179569034 4 3 3.5 0.01 dme-miR-304-5p 6mer3-8 TGAGAT X 6781828 6781833 - X_6781828_6781833_- 0.95344788 0.961889251 0.957668565 0.005968971 C3G FBtr0300526|FBtr0334967|FBtr0299794|FBtr0299793|FBtr0334968|FBtr0340087|FBtr0299791|FBtr0299795|FBtr0299792|FBtr0334969 6781414|6781414|6781414|6781414|6781414|6780788|6780788|6781414|6781414|6781414 6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353 X - 6781806 6781858 3'utr C3G FlyBase G65276.1 AAATCAGCAATTTTCGCTTTTGTTTTGAGATCTCTTTTTTACACAAGAACACA 26 6781824 0.979570102 9 24 340 0.931034483 1.431363764 0.413793103 0.115384615 0.206896552 26 2 0 27 X:6781806-6781858 6 C3G FBtr0299792|FBtr0334969|FBtr0299791|FBtr0299795|FBtr0334968|FBtr0340087|FBtr0300526|FBtr0334967|FBtr0299794|FBtr0299793 6781414|6781414|6780788|6781414|6781414|6780788|6781414|6781414|6781414|6781414 6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353 TGAGAT 6mer3-8 dme-miR-304-5p X - 6781815 6781847 3'utr C3G FlyBase G49172.1 TTTCGCTTTTGTTTTGAGATCTCTTTTTTACAC 22 6781823 0.624662568 9 21 307 0.972222222 1.544068044 0.583333333 0.409090909 0.638888889 22 1 0 35 X:6781815-6781847 6 22 6184 FBgn0259228 1638.55 32.65333333 50.12 0.013426505 0.673744385 0.438946528 -9 -10 -9.5 0.01 dme-miR-278-3p 6mer3-8 CCCACC X 6781977 6781982 - X_6781977_6781982_- 0.98962653 1 0.994813265 0.007335172 C3G FBtr0300526|FBtr0334967|FBtr0299794|FBtr0299793|FBtr0334968|FBtr0340087|FBtr0299791|FBtr0299795|FBtr0299792|FBtr0334969 6781414|6781414|6781414|6781414|6781414|6780788|6780788|6781414|6781414|6781414 6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353 X - 6781952 6782013 3'utr C3G FlyBase G65277.1 TTGGGTCGATGGACCTAACCTCAGCTAACTCCCCACCAATATTCGAATCCGAATCCCTGTCT 6 6781984 0.972909422 6 6 35 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 X:6781952-6782013 6 C3G FBtr0299792|FBtr0334969|FBtr0299791|FBtr0299795|FBtr0334968|FBtr0340087|FBtr0300526|FBtr0334967|FBtr0299794|FBtr0299793 6781414|6781414|6780788|6781414|6781414|6780788|6781414|6781414|6781414|6781414 6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353 CCCACC 6mer3-8 dme-miR-278-3p X - 6781977 6782028 3'utr C3G FlyBase G49173.1 AAGCTCTATGAGTCATTGGGTCGATGGACCTAACCTCAGCTAACTCCCCACC 10 6782012 0.978077675 4 8 57 0.923076923 1.079181246 0.153846154 0.3 0.461538462 10 1 0 12 X:6781977-6782028 5 2.5 6185 FBgn0259228 1638.55 32.65333333 50.12 0.001525739 0.076561862 0.049880287 2 30 16 0.01 dme-miR-190-5p 6mer3-8 ACATAT X 6812161 6812166 + X_6812161_6812166_+ 1 1 1 0 pod1 FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228|FBtr0112956|FBtr0070964|FBtr0070966 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813830|6813830|6813830|6813830|6813520|6813830|6813830 X + 6812103 6812165 3'utr pod1 FlyBase G59407.1 TCAGTTTATGTGGCCATATAGGAAAAGTGAGGAGAAGGACTTAGATGATACTGCTTTTACATA 8 6812159 0.93192631 7 7 60 0.888888889 0.903089987 0 0.125 0.222222222 8 1 0 8 X:6812103-6812165 5 pod1 FBtr0112956|FBtr0070964|FBtr0070966|FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813520|6813830|6813830|6813830|6813830|6813830|6813830 ACATAT 6mer3-8 dme-miR-190-5p X + 6812107 6812191 3'utr pod1 FlyBase G44936.1 TTTATGTGGCCATATAGGAAAAGTGAGGAGAAGGACTTAGATGATACTGCTTTTACATATACGCAAAATGTATTTCCCTCTCTGT 8 6812144 0.984837052 8 8 65 1 1.041392685 0 0.375 0.545454545 8 0 0 11 X:6812107-6812191 6 2.5 6186 FBgn0029903 1544.65 31.03666667 47.70666667 0.00161849 0.080549887 0.052403577 2 17 9.5 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 6812373 6812379 + X_6812373_6812379_+ 0.661615511 0.661615511 0.661615511 0 pod1 FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228|FBtr0112956|FBtr0070964|FBtr0070966 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813830|6813830|6813830|6813830|6813520|6813830|6813830 X + 6812358 6812404 3'utr pod1 FlyBase G59409.2 ACCCCCACCATTGTTTCTAGTCTTTCGCATCGTTCGATCCCCCAAAT 90 6812380 0.790910513 10 61 825 0.673267327 1.230448921 0.108910891 0.122222222 0.217821782 90 30 3 68 X:6812358-6812404 7 pod1 FBtr0112956|FBtr0070964|FBtr0070966|FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813520|6813830|6813830|6813830|6813830|6813830|6813830 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X + 6812359 6812403 3'utr pod1 FlyBase G44937.2 CCCCCACCATTGTTTCTAGTCTTTCGCATCGTTCGATCCCCCAAA 91 6812380 0.630473063 8 45 765 0.510948905 0.942008053 0.03649635 0.395604396 0.598540146 91 60 7 70 X:6812359-6812403 7 82.5 6187 FBgn0029903 1544.65 31.03666667 47.70666667 0.053410158 2.658146279 1.729318055 -7 -7 -7 0.01 dme-miR-14-3p 6mer2-7 AGACTG X 6812467 6812472 + X_6812467_6812472_+ 1 1 1 0 pod1 FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228|FBtr0112956|FBtr0070964|FBtr0070966 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813830|6813830|6813830|6813830|6813520|6813830|6813830 X + 6812446 6812488 3'utr pod1 FlyBase G59410.1 AGACAGGAAACAAAAACATATAGACTGTAGCCAAACGAAAAAT 99 6812466 0.900310695 3 98 295 0.991869919 1.785329835 0.097560976 0.222222222 0.37398374 99 0 1 122 X:6812446-6812488 6 pod1 FBtr0112956|FBtr0070964|FBtr0070966|FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813520|6813830|6813830|6813830|6813830|6813830|6813830 AGACTG 6mer2-7 dme-miR-14-3p X + 6812450 6812488 3'utr pod1 FlyBase G44938.1 AGGAAACAAAAACATATAGACTGTAGCCAAACGAAAAAT 71 6812466 0.889506262 3 69 215 0.979166667 1.496006599 0.104166667 0.253521127 0.447916667 71 0 2 94 X:6812450-6812488 6 84.5 6188 FBgn0029903 1544.65 31.03666667 47.70666667 0.054704949 2.722586188 1.771240917 1 1 1 0.01 dme-miR-8-3p 6mer2-7 AGTATT X 6813216 6813221 + X_6813216_6813221_+ 1 1 1 0 pod1 FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228|FBtr0112956|FBtr0070964|FBtr0070966 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813830|6813830|6813830|6813830|6813520|6813830|6813830 X + 6813190 6813325 3'utr pod1 FlyBase G59413.1 AAACGCCATGGAACGACTGACAGACAAGTATTCGCTAAACATTCTGATCCAAATCTGCCCGGCCCGTCAAAAAGTGTTCCACAGCACGAGTAGAATTGATCTGGGATCGATTGGGATCTCGGGATCGGGGTAGCGG 30 6813245 0.870300535 12 26 139 0.861111111 1.014240439 0.277777778 0.2 0.333333333 30 3 2 31 X:6813190-6813325 6 pod1 FBtr0112956|FBtr0070964|FBtr0070966|FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813520|6813830|6813830|6813830|6813830|6813830|6813830 AGTATT 6mer2-7 dme-miR-8-3p X + 6813191 6813258 3'utr pod1 FlyBase G44941.1 AACGCCATGGAACGACTGACAGACAAGTATTCGCTAAACATTCTGATCCAAATCTGCCCGGCCCGTCA 10 6813245 0.948442501 5 9 39 0.857142857 1.079181246 0.357142857 0.3 0.5 10 2 0 12 X:6813191-6813258 6 4.5 6189 FBgn0029903 1544.65 31.03666667 47.70666667 0.002913281 0.144989797 0.094326439 -29 -29 -29 0.01 dme-bantam-3p 6mer3-8 TGATCT X 6813286 6813291 + X_6813286_6813291_+ 0.61849457 1 0.809247285 0.269765055 pod1 FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228|FBtr0112956|FBtr0070964|FBtr0070966 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813830|6813830|6813830|6813830|6813520|6813830|6813830 X + 6813190 6813325 3'utr pod1 FlyBase G59413.1 AAACGCCATGGAACGACTGACAGACAAGTATTCGCTAAACATTCTGATCCAAATCTGCCCGGCCCGTCAAAAAGTGTTCCACAGCACGAGTAGAATTGATCTGGGATCGATTGGGATCTCGGGATCGGGGTAGCGG 30 6813286 0.870300535 12 26 139 0.861111111 1.014240439 0.277777778 0.2 0.333333333 30 3 2 31 X:6813190-6813325 6 pod1 FBtr0112956|FBtr0070964|FBtr0070966|FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813520|6813830|6813830|6813830|6813830|6813830|6813830 TGATCT 6mer3-8 dme-bantam-3p X + 6813272 6813319 3'utr pod1 FlyBase G44942.1 AGCACGAGTAGAATTGATCTGGGATCGATTGGGATCTCGGGATCGGGG 7 6813300 0.977940622 4 6 43 0.8 0.903089987 0.7 0.428571429 0.6 7 2 0 8 X:6813272-6813319 6 7.5 6190 FBgn0029903 1544.65 31.03666667 47.70666667 0.004855469 0.241649662 0.157210732 0 -14 -7 0.01 dme-miR-970-3p 6mer3-8 TCTTAT X 6813451 6813456 + X_6813451_6813456_+ 1 1 1 0 pod1 FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228|FBtr0112956|FBtr0070964|FBtr0070966 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813830|6813830|6813830|6813830|6813520|6813830|6813830 X + 6813432 6813472 3'utr pod1 FlyBase G59414.1 ATTACGATTTTCGAACGTCTCTTATTTATATTTATATATAT 20 6813453 0.739894318 4 19 217 0.96 1.380211242 0 0.2 0.36 20 1 0 24 X:6813432-6813472 6 pod1 FBtr0112956|FBtr0070964|FBtr0070966|FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813520|6813830|6813830|6813830|6813830|6813830|6813830 TCTTAT 6mer3-8 dme-miR-970-3p X + 6813404 6813470 3'utr pod1 FlyBase G44943.1 GTCATTCTGTATTTATTAGCCATATTCGATTACGATTTTCGAACGTCTCTTATTTATATTTATATAT 18 6813453 0.990403806 6 18 189 1 1.447158031 0.035714286 0.444444444 0.642857143 18 0 0 28 X:6813404-6813470 6 16.5 6191 FBgn0029903 1544.65 31.03666667 47.70666667 0.010682032 0.531629256 0.345863611 -2 -2 -2 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA X 6818313 6818318 - X_6818313_6818318_- 1 1 1 0 Nf-YC FBtr0070974 6818176 6818700 X - 6818293 6818330 3'utr Nf-YC FlyBase G65291.1 ATTAGTGTATGTATGTGACGGGTGACGGATGCCACCGG 10 6818319 0.675501185 5 7 49 0.769230769 0.698970004 0.538461538 0.2 0.384615385 10 2 1 10 X:6818293-6818330 6 Nf-YC FBtr0070974 6818176 6818700 ATGTGA 6mer3-8 dme-miR-1003-3p X - 6818293 6818327 3'utr Nf-YC FlyBase G49180.1 AGTGTATGTATGTGACGGGTGACGGATGCCACCGG 6 6818319 0.706875651 3 5 31 0.888888889 0.903089987 0 0.5 0.666666667 6 1 0 8 X:6818293-6818327 6 7.5 6192 FBgn0029905 205.9466667 9.923333333 15.23333333 0.036417195 0.755794424 0.492341357 1 1 1 0.01 dme-miR-980-3p 6mer3-8 GGCAGC X 6818417 6818422 - X_6818417_6818422_- 1 1 1 0 Nf-YC FBtr0070974 6818176 6818700 X - 6818401 6818444 3'utr Nf-YC FlyBase G65292.1 ATTGCTGACCCTCCCGCCCCCTGGCAGCAGGTTTCACCTTCTCC 11 6818423 0.941393583 2 11 48 1 1.079181246 0.166666667 0.090909091 0.166666667 11 0 0 12 X:6818401-6818444 6 Nf-YC FBtr0070974 6818176 6818700 GGCAGC 6mer3-8 dme-miR-980-3p X - 6818408 6818473 3'utr Nf-YC FlyBase G49181.1 GTGTAGAAACGATTTCTCAATTGTAATTTATTGCTGACCCTCCCGCCCCCTGGCAGCAGGTTTCAC 9 6818423 0.99961713 4 8 46 0.928571429 1.113943352 0.071428571 0.333333333 0.571428571 9 1 0 13 X:6818408-6818473 6 7 6193 FBgn0029905 205.9466667 9.923333333 15.23333333 0.033989382 0.705408129 0.4595186 1 1 1 0.01 dme-miR-11-3p 7mer-m1 TGTGATG X 6839650 6839656 - X_6839650_6839656_- 0.535593563 0.535593563 0.535593563 0 CG14435 FBtr0071042|FBtr0343323 6839430|6838172 6840376|6840376 X - 6839636 6839683 3'utr CG14435 FlyBase G65305.1 ACCAACCAACAAAAGAATGTCAACCAATGTGATGTTAAATTTTATATT 58 6839649 0.986446574 7 53 460 0.929577465 1.51851394 0.112676056 0.206896552 0.352112676 58 4 1 66 X:6839636-6839683 7 CG14435 FBtr0343323|FBtr0071042 6838172|6839430 6840376|6840376 TGTGATG 7mer-m1 dme-miR-11-3p X - 6839635 6839682 3'utr CG14435 FlyBase G49188.2 CCAACCAACAAAAGAATGTCAACCAATGTGATGTTAAATTTTATATTT 45 6839649 0.987678926 9 39 361 0.880597015 1.469822016 0.23880597 0.355555556 0.567164179 45 7 1 59 X:6839635-6839682 7 48.5 6194 FBgn0029911 561.5333333 25.08 38.61666667 0.086370652 1.933811802 1.255934398 -7 -7 -7 0.01 dme-miR-2a-2-5p 6mer2-7 GATGAG X 6839710 6839715 - X_6839710_6839715_- 1 1 1 0 CG14435 FBtr0071042|FBtr0343323 6839430|6838172 6840376|6840376 X - 6839705 6839756 3'utr CG14435 FlyBase G65306.1 AAGCAGAAGATTTTGATGATGACGAACGAGATGAGAATAAGGATGAGCGTAA 6 6839739 0.932897231 5 5 30 0.833333333 0.698970004 0.166666667 0 0 6 1 0 5 X:6839705-6839756 6 CG14435 FBtr0343323|FBtr0071042 6838172|6839430 6840376|6840376 GATGAG 6mer2-7 dme-miR-2a-2-5p X - 6839704 6839739 3'utr CG14435 FlyBase G49189.1 GATGACGAACGAGATGAGAATAAGGATGAGCGTAAA 10 6839719 0.74055207 3 8 26 0.882352941 1.176091259 0.470588235 0.7 0.823529412 10 2 0 15 X:6839704-6839739 6 6 6195 FBgn0029911 561.5333333 25.08 38.61666667 0.010685029 0.23923445 0.155373328 24 4 14 0.01 dme-bantam-3p 6mer2-7 GATCTC X 6851328 6851333 + X_6851328_6851333_+ 1 1 1 0 CG4558 FBtr0070995 6851128 6851884 X + 6851284 6851358 3'utr CG4558 FlyBase G59443.1 CCCTATGCTTTTGCAGTCAGTTACAATTGGTTGTACTGGAAACCGATCTCTGCGCCGGATCCCATCTCCGAAACG 152 6851334 0.946657051 6 149 609 0.989130435 2.260071388 0.364130435 0.177631579 0.320652174 152 2 0 182 X:6851284-6851358 6 CG4558 FBtr0070995 6851128 6851884 GATCTC 6mer2-7 dme-bantam-3p X + 6851301 6851390 3'utr CG4558 FlyBase G44964.1 CAGTTACAATTGGTTGTACTGGAAACCGATCTCTGCGCCGGATCCCATCTCCGAAACGCTGTCCATCAGCCTAATTGGATCTTACTGCTA 89 6851334 0.853351808 7 86 395 0.976923077 2.103803721 0.276923077 0.359550562 0.561538462 89 3 0 127 X:6851301-6851390 6 115.5 6196 FBgn0029914 220.6666667 13.97333333 21.30666667 0.523413897 8.265744275 5.420838548 -6 -6 -6 0.01 dme-miR-79-3p 8mer-A1 TAGCTTTA X 6851440 6851447 + X_6851440_6851447_+ 0.625364009 0.625360979 0.625362494 2.12E-06 CG4558 FBtr0070995|FBtr0300177 6851128|6851390 6851884|6851884 X + 6851401 6851452 3'utr CG4558 FlyBase G59444.1 ATTCAGATGGCAGTCCACGTTTCCCGCTTCCCTCGCTCCTAGCTTTAAGCGC 19 6851428 0.773667487 6 16 133 0.95 1.278753601 0.5 0.052631579 0.1 19 1 0 19 X:6851401-6851452 8 CG4558 FBtr0070995|FBtr0300177 6851128|6851390 6851884|6851884 TAGCTTTA 8mer-A1 dme-miR-79-3p X + 6851408 6851511 3'utr CG4558 FlyBase G44965.1 TGGCAGTCCACGTTTCCCGCTTCCCTCGCTCCTAGCTTTAAGCGCAATATACTTATATATAGATATATACACACACGACAACCAGGACTTTTACCAAGCCAAAA 28 6851428 0.969634999 8 27 157 1 1.612783857 0.073170732 0.357142857 0.56097561 28 0 0 41 X:6851408-6851511 8 13 6197 FBgn0029914 220.6666667 13.97333333 21.30666667 0.058912387 0.930343511 0.610137672 12 12 12 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC X 6851723 6851729 + X_6851723_6851729_+ 0.661615645 0.661615645 0.661615645 0 CG4558 FBtr0070995|FBtr0300177 6851128|6851390 6851884|6851884 X + 6851685 6851839 3'utr CG4558 FlyBase G59445.1 CAGTTAACAGTTAGCTCCTGGCAGCCGCGCTTCATCCTTGTGTTCGTCGTTCTAACCATTTTGCATTTAAAACTCTCGACTCTACGTTCTGTTCACACCAACTAGCGTAGCCAACGGAAAGCGATTTTGTAAATATCCATTGCCAGACTTGAGTT 94 6851745 0.986301179 14 91 781 0.981481481 2.025305865 0.064814815 0.138297872 0.25 94 2 0 106 X:6851685-6851839 7 CG4558 FBtr0070995|FBtr0300177 6851128|6851390 6851884|6851884 TGTGTTC 7mer-m8 dme-miR-317-3p X + 6851688 6851814 3'utr CG4558 FlyBase G44966.1 TTAACAGTTAGCTCCTGGCAGCCGCGCTTCATCCTTGTGTTCGTCGTTCTAACCATTTTGCATTTAAAACTCTCGACTCTACGTTCTGTTCACACCAACTAGCGTAGCCAACGGAAAGCGATTTTGT 39 6851722 0.987748038 8 37 331 0.943396226 1.22184875 0.169811321 0.230769231 0.433962264 39 1 2 50 X:6851688-6851814 7 24 6198 FBgn0029914 220.6666667 13.97333333 21.30666667 0.108761329 1.717557252 1.12640801 -22 1 -10.5 0.01 dme-miR-277-3p 8mer-A1 TGCATTTA X 6851746 6851753 + X_6851746_6851753_+ 0.625364269 0.625364269 0.625364269 0 CG4558 FBtr0070995|FBtr0300177 6851128|6851390 6851884|6851884 X + 6851685 6851839 3'utr CG4558 FlyBase G59445.1 CAGTTAACAGTTAGCTCCTGGCAGCCGCGCTTCATCCTTGTGTTCGTCGTTCTAACCATTTTGCATTTAAAACTCTCGACTCTACGTTCTGTTCACACCAACTAGCGTAGCCAACGGAAAGCGATTTTGTAAATATCCATTGCCAGACTTGAGTT 94 6851745 0.986301179 14 91 781 0.981481481 2.025305865 0.064814815 0.138297872 0.25 94 2 0 106 X:6851685-6851839 8 CG4558 FBtr0070995|FBtr0300177 6851128|6851390 6851884|6851884 TGCATTTA 8mer-A1 dme-miR-277-3p X + 6851688 6851814 3'utr CG4558 FlyBase G44966.1 TTAACAGTTAGCTCCTGGCAGCCGCGCTTCATCCTTGTGTTCGTCGTTCTAACCATTTTGCATTTAAAACTCTCGACTCTACGTTCTGTTCACACCAACTAGCGTAGCCAACGGAAAGCGATTTTGT 39 6851722 0.987748038 8 37 331 0.943396226 1.22184875 0.169811321 0.230769231 0.433962264 39 1 2 50 X:6851688-6851814 8 20 6199 FBgn0029914 220.6666667 13.97333333 21.30666667 0.090634441 1.43129771 0.938673342 1 24 12.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 6851938 6851943 - X_6851938_6851943_- 0.755363009 0.755363009 0.755363009 0 CG14434 FBtr0345899|FBtr0345899|FBtr0345899|FBtr0343322|FBtr0343322|FBtr0343322|FBtr0071040|FBtr0071040|FBtr0071040 6851907|6851907|6851907|6851907|6851907|6851907|6851907|6851907|6851907 6852045|6852045|6852045|6852045|6852045|6852045|6852045|6852045|6852045 X - 6851926 6851955 3'utr CG14434 FlyBase G65314.1 CCATAAAACATTCTGTGAGGCAAACAAAAA 5 6851942 0.908657898 3 5 17 1 0.903089987 0 0.6 0.75 5 0 0 8 X:6851926-6851955 6 CG14434 FBtr0071040|FBtr0071040|FBtr0071040|FBtr0343322|FBtr0343322|FBtr0343322|FBtr0345899|FBtr0345899|FBtr0345899 6851907|6851907|6851907|6851907|6851907|6851907|6851907|6851907|6851907 6852045|6852045|6852045|6852045|6852045|6852045|6852045|6852045|6852045 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X - 6851927 6851962 3'utr CG14434 FlyBase G49195.1 TTGTTATCCATAAAACATTCTGTGAGGCAAACAAAA 10 6851942 0.95233215 3 8 41 0.875 1.146128036 0 0.4 0.625 10 2 0 14 X:6851927-6851962 6 7.5 6200 FBgn0029915 147.6666667 23.04333333 35.10666667 0.050790068 0.325473745 0.213634637 -1 -1 -1 0.01 dme-bantam-3p 6mer2-7 GATCTC X 6879019 6879024 + X_6879019_6879024_+ 1 1 1 0 CG43736 FBtr0345898|FBtr0330265|FBtr0330263|FBtr0330268|FBtr0330264 6878698|6878698|6878698|6878698|6878698 6881580|6880502|6880429|6881580|6880095 X + 6878965 6879061 3'utr CG43736 FlyBase G59476.1 CGCCACCGCCAGCTCCGGCAGTTCCAGCCACACCACCCGGAGCGGGAACCATTGGATCTCCTGCACTATCAGCAACACCTGTACACACCACCAGCAA 53 6879017 0.952118737 7 51 225 0.966666667 1.462397998 0.266666667 0.113207547 0.216666667 53 1 1 58 X:6878965-6879061 6 CG43736 FBtr0345898|FBtr0330265|FBtr0330268|FBtr0330263|FBtr0330264 6878698|6878698|6878698|6878698|6878698 6881580|6880502|6881580|6880429|6880095 GATCTC 6mer2-7 dme-bantam-3p X + 6878965 6879063 3'utr CG43736 FlyBase G44982.1 CGCCACCGCCAGCTCCGGCAGTTCCAGCCACACCACCCGGAGCGGGAACCATTGGATCTCCTGCACTATCAGCAACACCTGTACACACCACCAGCAACA 43 6879026 0.950015205 7 42 182 0.985294118 1.826074803 0.25 0.348837209 0.588235294 43 1 0 67 X:6878965-6879063 6 43.5 6201 FBgn0263993 1284.363333 32.20666667 49.73 0.033868921 1.350652039 0.874723507 2 -7 -2.5 0.01 dme-miR-2b-2-5p 6mer2-7 TGAAGA X 6879890 6879895 + X_6879890_6879895_+ 1 1 1 0 CG43736 FBtr0330266|FBtr0330267|FBtr0345898|FBtr0330265|FBtr0330263|FBtr0330268|FBtr0330264 6879853|6879853|6878698|6878698|6878698|6878698|6878698 6881580|6881580|6881580|6880502|6880429|6881580|6880095 X + 6879850 6879909 stop_codon CG43736 FlyBase G59478.1 TCTGAGCGAGAGATCGTAGATAGAATAGATCGTAGACAGATGAAGATGAATGGGGCGAGC 56 6879866 0.742557484 9 46 245 0.808823529 1.263241435 0.455882353 0.196428571 0.338235294 56 11 2 55 X:6879850-6879909 6 CG43736 FBtr0345898|FBtr0330266|FBtr0330265|FBtr0330268|FBtr0330267|FBtr0330263|FBtr0330264 6878698|6879853|6878698|6878698|6879853|6878698|6878698 6881580|6881580|6880502|6881580|6881580|6880429|6880095 TGAAGA 6mer2-7 dme-miR-2b-2-5p X + 6879843 6879908 stop_codon CG43736 FlyBase G44983.1 GCGGCCTTCTGAGCGAGAGATCGTAGATAGAATAGATCGTAGACAGATGAAGATGAATGGGGCGAG 21 6879866 0.943877841 7 19 77 0.918918919 1.531478917 0.432432432 0.523809524 0.72972973 21 3 0 34 X:6879843-6879908 6 13 6202 FBgn0263993 1284.363333 32.20666667 49.73 0.010121746 0.403643138 0.261411623 24 24 24 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 6958287 6958292 - X_6958287_6958292_- 1 1 1 0 CG32732 FBtr0071039 6958030 6958448 X - 6958274 6958310 3'utr CG32732 FlyBase G65319.1 CAGGTTTTGAAGTTGGATACCAAAATAACTTATAATT 14 6958294 0.725897259 6 10 89 0.705882353 1.079181246 0.294117647 0.214285714 0.352941176 14 5 0 12 X:6958274-6958310 6 CG32732 FBtr0071039 6958030 6958448 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X - 6958279 6958308 3'utr CG32732 FlyBase G49198.1 GGTTTTGAAGTTGGATACCAAAATAACTTA 8 6958294 0.737993789 4 7 44 0.9 0.954242509 0.1 0.25 0.4 8 1 0 9 X:6958279-6958308 6 11 6203 FBgn0052732 209.6666667 11.63 17.8 0.052464229 0.945829751 0.617977528 2 2 2 0.01 dme-miR-92b-3p 6mer2-7 TGCAAT X 7083497 7083502 - X_7083497_7083502_- 1 1 1 0 Sxl FBtr0331262|FBtr0331250|FBtr0331259|FBtr0336727|FBtr0331263|FBtr0331249|FBtr0331257 7082919|7082919|7082919|7082919|7082919|7082919|7082919 7084527|7084527|7084527|7088697|7084527|7088697|7084527 X - 7083464 7083508 5'utr Sxl FlyBase G65337.1 AAACATTGCAATCAAGCAATCAGAACTGAATTATAAAAGTAAAAC 10 7083478 0.941826441 4 10 42 1 1.176091259 0 0.3 0.533333333 10 0 0 15 X:7083464-7083508 6 Sxl FBtr0331249|FBtr0336727|FBtr0331257|FBtr0331263|FBtr0331259|FBtr0331250|FBtr0331262 7082919|7082919|7082919|7082919|7082919|7082919|7082919 7088697|7088697|7084527|7084527|7084527|7084527|7084527 TGCAAT 6mer2-7 dme-miR-92b-3p X - 7083475 7083497 5'utr Sxl FlyBase G49207.1 TCAAGCAATCAGAACTGAATTAT 5 7083478 0.747605742 2 5 20 1 0.903089987 0 0.4 0.625 5 0 0 8 X:7083475-7083497 1 2 6204 FBgn0264270 1695.003333 68.63666667 104.69 0.001179939 0.029138944 0.019104021 -24 -24 -24 0.01 dme-miR-968-5p 6mer3-8 ACTACT X 7098639 7098644 - X_7098639_7098644_- 1 1 1 0 CG4615 FBtr0071020 7098576 7099373 X - 7098605 7098715 3'utr CG4615 FlyBase G65350.1 ATTTACAAATACGCTTGATATCTTGATATTTTCGGGGCCTGGCTCGCGATCGGCGGATATAGCTTTCGTGTACTACTCGTATTTATGGTGCAGATCGATTAGTTTTAATGG 38 7098647 0.911034282 11 32 327 0.860465116 1.267171728 0.139534884 0.105263158 0.209302326 38 5 1 37 X:7098605-7098715 6 CG4615 FBtr0071020 7098576 7099373 ACTACT 6mer3-8 dme-miR-968-5p X - 7098616 7098738 3'utr CG4615 FlyBase G49212.1 CGCAGATACTGAAGAAGGTGACTATTTACAAATACGCTTGATATCTTGATATTTTCGGGGCCTGGCTCGCGATCGGCGGATATAGCTTTCGTGTACTACTCGTATTTATGGTGCAGATCGATT 30 7098647 0.886985773 12 26 228 0.866666667 1.591064607 0.288888889 0.333333333 0.555555556 30 6 0 39 X:7098616-7098738 6 15 6205 FBgn0029935 110.3333333 6.846666667 10.52 0.135951662 2.190847128 1.425855513 3 3 3 0.01 dme-miR-14-3p 6mer3-8 AAGACT X 7098998 7099003 - X_7098998_7099003_- 1 0.79566197 0.897830985 0.144488785 CG4615 FBtr0071020 7098576 7099373 X - 7098982 7099023 3'utr CG4615 FlyBase G65351.1 TTTGGCCATGTGTTTCTCAAAAGACTTTGAACCGTACTCAAA 20 7098996 0.818299503 2 19 137 0.962962963 1.414973348 0.481481481 0.25 0.444444444 20 1 0 26 X:7098982-7099023 6 CG4615 FBtr0071020 7098576 7099373 AAGACT 6mer3-8 dme-miR-14-3p X - 7098972 7099092 3'utr CG4615 FlyBase G49213.1 CCTCTCCCTCTCAACTTTAACTTGATATTATTAGCGATATTCATATATTTAGTATCCATAACGACCCGTTTTGGCCATGTGTTTCTCAAAAGACTTTGAACCGTACTCAAAAGGCAAAGGA 38 7098996 0.985942427 9 35 343 0.933333333 1.447158031 0.316666667 0.394736842 0.616666667 38 3 1 56 X:7098972-7099092 6 18 6206 FBgn0029935 110.3333333 6.846666667 10.52 0.163141994 2.629016553 1.711026616 -7 -7 -7 0.01 dme-miR-283-5p 8mer-A1 TGATATTA X 7099063 7099070 - X_7099063_7099070_- 0.592192292 0.592192292 0.592192292 0 CG4615 FBtr0071020 7098576 7099373 X - 7099048 7099082 3'utr CG4615 FlyBase G65352.1 TCAACTTTAACTTGATATTATTAGCGATATTCATA 12 7099071 0.808919566 2 11 125 1 1.146128036 0 0.166666667 0.285714286 12 0 0 14 X:7099048-7099082 8 CG4615 FBtr0071020 7098576 7099373 TGATATTA 8mer-A1 dme-miR-283-5p X - 7098972 7099092 3'utr CG4615 FlyBase G49213.1 CCTCTCCCTCTCAACTTTAACTTGATATTATTAGCGATATTCATATATTTAGTATCCATAACGACCCGTTTTGGCCATGTGTTTCTCAAAAGACTTTGAACCGTACTCAAAAGGCAAAGGA 38 7099071 0.985942427 9 35 343 0.933333333 1.447158031 0.316666667 0.394736842 0.616666667 38 3 1 56 X:7098972-7099092 8 13 6207 FBgn0029935 110.3333333 6.846666667 10.52 0.117824773 1.898734177 1.235741445 1 1 1 0.01 dme-miR-283-5p 6mer3-8 TGATAT X 7099262 7099267 - X_7099262_7099267_- 1 1 1 0 CG4615 FBtr0071020 7098576 7099373 X - 7099180 7099289 3'utr CG4615 FlyBase G65353.2 AGCCATGTGTAACGTATTCCTATGATATACCCGATGTACCCGAGTCTCTGCTCCACAATTAGCCAAATTTTAAGCGAGCGAGGACGCCTAGCTTGTAGTCTAGTTGTAGC 183 7099255 0.948399823 12 179 1095 0.97260274 2.027349608 0.397260274 0.169398907 0.305936073 183 5 1 213 X:7099180-7099289 6 CG4615 FBtr0071020 7098576 7099373 TGATAT 6mer3-8 dme-miR-283-5p X - 7099183 7099286 3'utr CG4615 FlyBase G49215.1 CATGTGTAACGTATTCCTATGATATACCCGATGTACCCGAGTCTCTGCTCCACAATTAGCCAAATTTTAAGCGAGCGAGGACGCCTAGCTTGTAGTCTAGTTGT 77 7099255 0.976780236 10 76 492 0.990990991 2.041392685 0.36036036 0.350649351 0.54954955 77 1 0 110 X:7099183-7099286 6 110 6208 FBgn0029935 110.3333333 6.846666667 10.52 0.996978852 16.06621227 10.45627376 -12 -12 -12 0.01 dme-miR-1006-3p 8mer-A1 CGAATTTA X 7099328 7099335 - X_7099328_7099335_- 0.67169717 0.671697512 0.671697341 2.12E-07 CG4615 FBtr0071020 7098576 7099373 X - 7099294 7099352 3'utr CG4615 FlyBase G65354.1 GTTGTGGTAACATGCAGCGAATTTAGAACTTAGAGTACTTAACGACAGGGATTCGATGT 8 7099340 0.982082952 4 7 52 0.909090909 1 0.818181818 0.25 0.454545455 8 1 0 10 X:7099294-7099352 8 CG4615 FBtr0071020 7098576 7099373 CGAATTTA 8mer-A1 dme-miR-1006-3p X - 7099302 7099353 3'utr CG4615 FlyBase G49216.1 AGTTGTGGTAACATGCAGCGAATTTAGAACTTAGAGTACTTAACGACAGGGA 11 7099340 0.965538146 4 10 63 0.944444444 1.230448921 0.611111111 0.454545455 0.666666667 11 1 0 17 X:7099302-7099353 8 7 6209 FBgn0029935 110.3333333 6.846666667 10.52 0.063444109 1.022395326 0.66539924 5 5 5 0.01 dme-miR-79-3p 8mer-A1 TAGCTTTA X 7106593 7106600 - X_7106593_7106600_- 0.625362508 0.62536379 0.625363149 9.19E-07 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 X - 7106533 7106651 3'utr fz4 FlyBase G65363.1 AAACGCAATTGCAATCGTAGCCGTAATGCCTAATTGTATTCAGTGTGCCATTAGCTTTAGGGACTTAACTGAAACGAGTCAATATCATGAAATTACCTTAAAAGAGTCCTTTTCCAGCA 189 7106601 0.837215011 15 178 1536 0.946188341 2.02325246 0.098654709 0.142857143 0.273542601 189 11 1 211 X:7106533-7106651 8 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 TAGCTTTA 8mer-A1 dme-miR-79-3p X - 7106506 7106644 3'utr fz4 FlyBase G49223.1 ATTGCAATCGTAGCCGTAATGCCTAATTGTATTCAGTGTGCCATTAGCTTTAGGGACTTAACTGAAACGAGTCAATATCATGAAATTACCTTAAAAGAGTCCTTTTCCAGCAACGAACTTTGGCGGAATTACTGAGGGT 139 7106601 0.986372923 15 129 1095 0.917030568 1.84509804 0.15720524 0.431654676 0.655021834 139 17 2 210 X:7106506-7106644 8 91 6210 FBgn0027342 197.34 6.033333333 9.256666667 0.46113307 15.08287293 9.830752611 1 1 1 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA X 7106666 7106673 - X_7106666_7106673_- 0.500120318 0.500120318 0.500120318 0 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 X - 7106655 7106702 3'utr fz4 FlyBase G65364.1 TGCTGTCTTCTCCCGATGCCGAAACAAGTGTACTTAACAATCGAAAAA 261 7106674 0.914030738 4 257 1204 0.99044586 2.191730393 0.207006369 0.16091954 0.302547771 261 2 1 311 X:7106655-7106702 8 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 GTACTTAA 8mer-A1 dme-miR-252-5p X - 7106654 7106702 3'utr fz4 FlyBase G49224.1 TGCTGTCTTCTCCCGATGCCGAAACAAGTGTACTTAACAATCGAAAAAA 165 7106674 0.9099972 5 162 763 0.988593156 2.414973348 0.19391635 0.43030303 0.642585551 165 3 0 260 X:7106654-7106702 8 208 6211 FBgn0027342 197.34 6.033333333 9.256666667 1.054018445 34.47513812 22.47029168 1 1 1 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA X 7106767 7106774 - X_7106767_7106774_- 0.650030357 0.647675061 0.648852709 0.001665449 fz4 FBtr0071018|FBtr0071018|FBtr0071018|FBtr0071017|FBtr0071017|FBtr0071017 7106270|7106270|7106270|7106270|7106270|7106270 7107380|7107380|7107380|7107380|7107380|7107380 X - 7106737 7106793 3'utr fz4 FlyBase G65365.1 AACGCGCAGCAACCAAATACTGTGATACGCATGTTCATGTCTTCAAAAACAAAAAAA 70 7106776 0.954505714 6 66 265 0.939759036 1.892094603 0.301204819 0.171428571 0.301204819 70 5 0 78 X:7106737-7106793 8 fz4 FBtr0071018|FBtr0071018|FBtr0071018|FBtr0071017|FBtr0071017|FBtr0071017 7106270|7106270|7106270|7106270|7106270|7106270 7107380|7107380|7107380|7107380|7107380|7107380 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 7106755 7106798 3'utr fz4 FlyBase G49225.1 AGAGAAACGCGCAGCAACCAAATACTGTGATACGCATGTTCATG 33 7106776 0.929823187 3 28 104 0.847457627 1.22184875 0.271186441 0.484848485 0.711864407 33 7 2 50 X:7106755-7106798 8 50 6212 FBgn0027342 197.34 6.033333333 9.256666667 0.253369819 8.287292818 5.401512423 2 2 2 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA X 7106984 7106991 - X_7106984_7106991_- 0.500120318 0.500120318 0.500120318 0 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 X - 7106967 7107012 3'utr fz4 FlyBase G65366.2 TCATATCCTATTTTCCTGTGTGTACTTAATGTTGCTCCTAATTAGT 158 7106992 0.808230906 8 146 1920 0.924324324 2.23299611 0.021621622 0.139240506 0.264864865 158 14 0 171 X:7106967-7107012 8 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 GTACTTAA 8mer-A1 dme-miR-252-5p X - 7106971 7107017 3'utr fz4 FlyBase G49227.1 GGGCTTCATATCCTATTTTCCTGTGTGTACTTAATGTTGCTCCTAAT 123 7106992 0.799816306 7 119 1476 0.967914439 2.257678575 0.026737968 0.390243902 0.598930481 123 6 0 181 X:7106971-7107017 8 140 6213 FBgn0027342 197.34 6.033333333 9.256666667 0.709435492 23.20441989 15.12423479 1 1 1 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT X 7107318 7107323 - X_7107318_7107323_- 1 1 1 0 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 X - 7107262 7107446 stop_codon fz4 FlyBase G65368.1 AAGTACAGCCAGCACGGCAGCTACTATCCCCACTTGCAGCAGTATGGCAATGAGACGCTACTCTAGACGGAATTGGATTAGGTACCATTTCAGGGCAGGAAATGCTTCCTGCTTCCAGTCAATGTTCCTGCAGCAGCTGCTGTGCCAAAGTCAATCCTCTACTATAACTTAATGCGGTTTCGGGT 61 7107324 0.977823112 19 56 369 0.927536232 1.806179974 0.101449275 0.114754098 0.217391304 61 5 0 64 X:7107262-7107446 6 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 GTTCCT 6mer2-7 dme-miR-276a-3p X - 7107297 7107378 3'utr fz4 FlyBase G49229.1 GGAATTGGATTAGGTACCATTTCAGGGCAGGAAATGCTTCCTGCTTCCAGTCAATGTTCCTGCAGCAGCTGCTGTGCCAAAG 32 7107324 0.981795499 8 28 203 0.924528302 1.69019608 0.169811321 0.34375 0.603773585 32 4 0 49 X:7107297-7107378 6 29.5 6214 FBgn0027342 197.34 6.033333333 9.256666667 0.149488193 4.889502762 3.18689233 1 1 1 0.01 dme-miR-33-5p 7mer-m8 CAATGCA X 7281196 7281202 - X_7281196_7281202_- 0.673565584 0.664384218 0.668974901 0.00649223 CG1677 FBtr0303415|FBtr0339819|FBtr0089712|FBtr0339820 7281087|7281087|7281087|7281087 7281438|7281438|7281438|7281438 X - 7281180 7281262 3'utr CG1677 FlyBase G65370.1 ATTCGCATCGTATTCGATATTGCCTTCGCCTGGGTGCAGCCGCTCGATCGCCATACAATTCAATGCATTTAGATTTAATAATC 53 7281203 0.990099778 12 50 506 0.948275862 1.740362689 0.103448276 0.094339623 0.172413793 53 3 0 55 X:7281180-7281262 7 CG1677 FBtr0089712|FBtr0339820|FBtr0303415|FBtr0339819 7281087|7281087|7281087|7281087 7281438|7281438|7281438|7281438 CAATGCA 7mer-m8 dme-miR-33-5p X - 7281133 7281248 3'utr CG1677 FlyBase G49232.1 CGATATTGCCTTCGCCTGGGTGCAGCCGCTCGATCGCCATACAATTCAATGCATTTAGATTTAATAATCATTATCCATTTTCCTACCCTGACTATTGCCAACTGAAGAGCATCAAT 51 7281195 0.985175751 15 38 397 0.784615385 1.707570176 0.138461538 0.254901961 0.415384615 51 14 0 51 X:7281133-7281248 7 37 6215 FBgn0029941 1454.373333 48.72333333 74.88666667 0.02544051 0.759389752 0.494079943 1 -7 -3 0.01 dme-miR-190-5p 7mer-m8 ACATATC X 7281310 7281316 - X_7281310_7281316_- 0.674514898 0.674514898 0.674514898 0 CG1677 FBtr0303415|FBtr0339819|FBtr0089712|FBtr0339820 7281087|7281087|7281087|7281087 7281438|7281438|7281438|7281438 X - 7281289 7281313 3'utr CG1677 FlyBase G65371.1 TATCCGATGGATATCGGAACGGCAT 5 7281311 0.958736298 3 3 21 0.5 0.602059991 0 0.6 0.75 5 4 0 4 X:7281289-7281313 4 CG1677 FBtr0089712|FBtr0339820|FBtr0303415|FBtr0339819 7281087|7281087|7281087|7281087 7281438|7281438|7281438|7281438 ACATATC 7mer-m8 dme-miR-190-5p X - 7281288 7281316 3'utr CG1677 FlyBase G49233.1 ACATATCCGATGGATATCGGAACGGCATC 8 7281306 0.924665961 2 6 30 0.923076923 1.079181246 0 0.375 0.615384615 8 1 0 12 X:7281288-7281316 7 6.5 6216 FBgn0029941 1454.373333 48.72333333 74.88666667 0.004469279 0.133406308 0.086797828 -5 -10 -7.5 0.01 dme-miR-317-3p 8mer-A1 TGTGTTCA X 7288830 7288837 - X_7288830_7288837_- 0.631136783 0.631105368 0.631121075 2.22E-05 unc-119 FBtr0071066|FBtr0346619 7288678|7288365 7289145|7289145 X - 7288754 7288864 5'utr unc-119 FlyBase G65393.1 AACAACAACACACTGAAGCACGCGGATTGTGTTCATTTATCAATGATTTCCACTTTGACTATATAATTTTAAGTGCTATGTGATTTCCCTTGATTTATATATGTATTTGTA 173 7288838 0.977208673 15 172 1426 0.994974874 2.29666519 0.135678392 0.121387283 0.236180905 173 1 0 198 X:7288754-7288864 8 unc-119 FBtr0346619|FBtr0071066 7288365|7288678 7289145|7289145 TGTGTTCA 8mer-A1 dme-miR-317-3p X - 7288754 7288868 5'utr unc-119 FlyBase G49250.1 ACACAACAACAACACACTGAAGCACGCGGATTGTGTTCATTTATCAATGATTTCCACTTTGACTATATAATTTTAAGTGCTATGTGATTTCCCTTGATTTATATATGTATTTGTA 122 7288838 0.885947695 14 120 1018 0.972677596 1.949390007 0.114754098 0.360655738 0.573770492 122 4 1 178 X:7288754-7288868 8 110.5 6217 FBgn0025549 924.56 49.97333333 77.10666667 0.11951631 2.211179296 1.433079716 1 1 1 0.01 dme-bantam-3p 7mer-m8 TGATCTC X 7288893 7288899 - X_7288893_7288899_- 0.661615243 0.661615243 0.661615243 0 unc-119 FBtr0071066|FBtr0346619 7288678|7288365 7289145|7289145 X - 7288868 7288978 5'utr unc-119 FlyBase G65393.2 ATATTATCACAGCCATTTTAGCCTTAGCACACCAAAGTTTTACCCACCATTCCTGTTTGATGTATTTAGCATCAAGATATGATCTCCTGCAAACGGAAACTAACACACAAA 384 7288899 0.97740174 9 374 2174 0.975 2.369215857 0.05625 0.203125 0.3625 384 11 1 468 X:7288868-7288978 7 unc-119 FBtr0346619|FBtr0071066 7288365|7288678 7289145|7289145 TGATCTC 7mer-m8 dme-bantam-3p X - 7288873 7288946 5'utr unc-119 FlyBase G49250.2 CAAAGTTTTACCCACCATTCCTGTTTGATGTATTTAGCATCAAGATATGATCTCCTGCAAACGGAAACTAACAC 284 7288891 0.848882889 10 278 1575 0.972850679 2.633468456 0.076923077 0.383802817 0.604072398 284 12 0 430 X:7288873-7288946 7 327.5 6218 FBgn0025549 924.56 49.97333333 77.10666667 0.354222549 6.553495197 4.24736296 0 -8 -4 0.01 dme-miR-278-3p 6mer3-8 CCCACC X 7310662 7310667 + X_7310662_7310667_+ 1 1 1 0 brk FBtr0071048 7310586 7311132 X + 7310632 7310722 3'utr brk FlyBase G59505.1 ACACACAATAGAAACTAAGGAAGCAGCAATCCCACCAATCGGATGTTATAATGGCAGTCACTGGGCCTGGCCTTTTAGTTCCCTAAGCCAT 284 7310683 0.948680829 15 277 1505 0.971518987 2.18610838 0.212025316 0.095070423 0.186708861 284 8 1 307 X:7310632-7310722 6 brk FBtr0071048 7310586 7311132 CCCACC 6mer3-8 dme-miR-278-3p X + 7310626 7310719 3'utr brk FlyBase G45001.1 AACAACACACACAATAGAAACTAAGGAAGCAGCAATCCCACCAATCGGATGTTATAATGGCAGTCACTGGGCCTGGCCTTTTAGTTCCCTAAGC 169 7310683 0.947540999 14 165 848 0.984375 2.100370545 0.26953125 0.366863905 0.58203125 169 3 1 252 X:7310626-7310719 6 97.5 6219 FBgn0024250 227.5733333 8.686666667 13.37 0.428433326 11.22409823 7.292445774 -21 -21 -21 0.01 dme-miR-308-3p 8mer-m1 CTGTGATT X 7328137 7328144 + X_7328137_7328144_+ 0.385560641 0.385560641 0.385560641 0 Dok FBtr0071049 7327562 7328806 X + 7328114 7328344 3'utr Dok FlyBase G59524.1 GTTAATTATGTTAAATTCGTAATCTGTGATTGTATTGTTAATTGTGAAACTGTTACATTTTTAGCAAGCACTGCCCGCCACTTGATGATCGCACTCGAAAAATTCCCCCGGCTCTTACTTAAAATGTAGTGTTAAATTAAAGCAAGAGAAAAATGAAACTCAATCGAATCATGGACGTAACGAAAATTTACAAAATGTGTATGCGATTTATGCTAAATATATGTGTTTTTG 141 7328136 0.992598651 28 128 1472 0.904761905 2.181843588 0.369047619 0.177304965 0.30952381 141 16 0 152 X:7328114-7328344 8 Dok FBtr0071049 7327562 7328806 CTGTGATT 8mer-m1 dme-miR-308-3p X + 7328116 7328295 3'utr Dok FlyBase G45010.1 TAATTATGTTAAATTCGTAATCTGTGATTGTATTGTTAATTGTGAAACTGTTACATTTTTAGCAAGCACTGCCCGCCACTTGATGATCGCACTCGAAAAATTCCCCCGGCTCTTACTTAAAATGTAGTGTTAAATTAAAGCAAGAGAAAAATGAAACTCAATCGAATCATGGACGTAACG 108 7328136 0.999173397 20 97 1128 0.889570552 1.559308011 0.429447853 0.398148148 0.601226994 108 15 3 145 X:7328116-7328295 8 84 6220 FBgn0029944 523.09 18.16 27.87 0.160584221 4.625550661 3.013993541 1 1 1 0.01 dme-miR-308-3p 7mer-m1 TGTGATT X 758656 758662 + X_758656_758662_+ 0.521223855 0.521223855 0.521223855 0 CG5254 FBtr0070134|FBtr0343759 758553|758553 758719|758719 X + 758606 758671 3'utr CG5254 FlyBase G57841.1 AAGTCGATTAGTCGCGATCAATGCCATCAAGGGGATGCTACTCTTCCGATTGTGATTCGTCAATAA 47 758655 0.806305202 11 45 370 0.962264151 1.40654018 0.150943396 0.127659574 0.226415094 47 1 1 51 X:758606-758671 7 CG5254 FBtr0070134|FBtr0343759 758553|758553 758719|758719 TGTGATT 7mer-m1 dme-miR-308-3p X + 758596 758674 3'utr CG5254 FlyBase G43758.1 GTATAATAGTAAGTCGATTAGTCGCGATCAATGCCATCAAGGGGATGCTACTCTTCCGATTGTGATTCGTCAATAAATG 49 758655 0.971769121 7 49 380 1 1.886490725 0.181818182 0.326530612 0.571428571 49 0 0 77 X:758596-758674 7 35.5 6221 FBgn0040383 45.33333333 4.423333333 6.693333333 0.783088235 8.025621703 5.303784861 1 1 1 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 761419 761424 + X_761419_761424_+ 1 1 1 0 CG5273 FBtr0070137|FBtr0070136|FBtr0070135 761360|761360|761360 761939|761939|761939 X + 761383 761454 3'utr CG5273 FlyBase G57843.1 CCACTGTGCACCCACTCAATTACCCGACTACCTACTGTACCTTCCTCCCCAGCTGTTGTGGCCTTGGCGCGC 91 761418 0.75859921 10 89 574 0.981132075 2.017033339 0.245283019 0.153846154 0.273584906 91 2 0 104 X:761383-761454 6 CG5273 FBtr0070135|FBtr0070137|FBtr0070136 761360|761360|761360 761939|761939|761939 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X + 761387 761481 3'utr CG5273 FlyBase G43760.1 TGTGCACCCACTCAATTACCCGACTACCTACTGTACCTTCCTCCCCAGCTGTTGTGGCCTTGGCGCGCATATTTGCGCTGACCAACATCGATAAT 52 761418 0.759215953 10 50 312 0.987179487 1.886490725 0.217948718 0.346153846 0.564102564 52 1 0 77 X:761387-761481 6 62 6222 FBgn0040382 52 2.953333333 4.456666667 1.192307692 20.99322799 13.91174271 1 1 1 0.01 dme-miR-8-3p 7mer-m8 CAGTATT X 761536 761542 + X_761536_761542_+ 0.661615243 0.661615243 0.661615243 0 CG5273 FBtr0070137|FBtr0070136|FBtr0070135 761360|761360|761360 761939|761939|761939 X + 761507 761552 3'utr CG5273 FlyBase G57844.1 CTTGAATTATGCCGTACCATCTCCGACTACAGTATTTGTGGATAAA 9 761543 0.682774663 5 9 62 1 1 0.2 0.111111111 0.2 9 0 0 10 X:761507-761552 7 CG5273 FBtr0070135|FBtr0070137|FBtr0070136 761360|761360|761360 761939|761939|761939 CAGTATT 7mer-m8 dme-miR-8-3p X + 761496 761552 3'utr CG5273 FlyBase G43761.1 GGACAAAAACTCTTGAATTATGCCGTACCATCTCCGACTACAGTATTTGTGGATAAA 7 761543 0.982284897 6 7 53 1 0.84509804 0.428571429 0 0 7 0 0 7 X:761496-761552 7 5.5 6223 FBgn0040382 52 2.953333333 4.456666667 0.105769231 1.862302483 1.234106208 -7 -7 -7 0.01 dme-miR-308-3p 7mer-m1 TGTGATT X 761603 761609 + X_761603_761609_+ 0.521223855 0.521223855 0.521223855 0 CG5273 FBtr0070137|FBtr0070136|FBtr0070135 761360|761360|761360 761939|761939|761939 X + 761574 761631 3'utr CG5273 FlyBase G57845.1 AAGCCCCCTTTTCCAATTTGGCCTTCAATTGTGATTGTTGCGGTGTGCATGGGCCCCG 98 761602 0.691776247 10 92 1007 0.929824561 1.326335861 0.394736842 0.112244898 0.236842105 98 4 4 106 X:761574-761631 7 CG5273 FBtr0070135|FBtr0070137|FBtr0070136 761360|761360|761360 761939|761939|761939 TGTGATT 7mer-m1 dme-miR-308-3p X + 761575 761637 3'utr CG5273 FlyBase G43762.1 AGCCCCCTTTTCCAATTTGGCCTTCAATTGTGATTGTTGCGGTGTGCATGGGCCCCGTAACCG 57 761602 0.991493225 5 54 573 0.947368421 1.653212514 0.357894737 0.543859649 0.726315789 57 4 1 90 X:761575-761637 7 76.5 6224 FBgn0040382 52 2.953333333 4.456666667 1.471153846 25.90293454 17.16529544 1 1 1 0.01 dme-miR-1008-3p 7mer-A1 GCTGTGA X 761862 761868 + X_761862_761868_+ 0.823349541 0.82334956 0.82334955 7.07E-08 CG5273 FBtr0070137|FBtr0070136|FBtr0070135 761360|761360|761360 761939|761939|761939 X + 761811 761908 3'utr CG5273 FlyBase G57848.1 AGTGTGTATTTTTCTAGACTTGTTAGCGTAATTGTTGCTTGTTTTTGTATTGCTGTGAGCAAACGTATTTGTTGCACTCTTCAATTGTTGAATAAAAT 43 761833 0.993005276 10 39 473 0.903846154 1.070037867 0.211538462 0.214285714 0.365384615 42 2 3 47 X:761811-761908 7 CG5273 FBtr0070135|FBtr0070137|FBtr0070136 761360|761360|761360 761939|761939|761939 GCTGTGA 7mer-A1 dme-miR-1008-3p X + 761797 761886 3'utr CG5273 FlyBase G43764.2 AAGTTCCCACTAAAAGTGTGTATTTTTCTAGACTTGTTAGCGTAATTGTTGCTTGTTTTTGTATTGCTGTGAGCAAACGTATTTGTTGCA 35 761833 0.990952476 11 33 355 0.94 1.672097858 0.22 0.371428571 0.56 35 3 0 47 X:761797-761886 7 13 6225 FBgn0040382 52 2.953333333 4.456666667 0.25 4.401805869 2.91697831 29 29 29 0.01 dme-miR-308-3p 7mer-m1 TGTGATT X 7674693 7674699 + X_7674693_7674699_+ 0.521223855 0.521223855 0.521223855 0 ct FBtr0305134|FBtr0114613|FBtr0331733|FBtr0071068 7674616|7674616|7674616|7674616 7678259|7678259|7678859|7678259 X + 7674621 7674744 3'utr ct FlyBase G59555.1 AAAAAAATTAACAGAACTAAATATAAATTCAGTGCAATGTGTAGAGAAGCGGAGATGGTTAACGCGTTTACTTGTGATTAAGTTTGAATGTTTAGACGATGTGAGGAGCCAGGAGACATACATA 63 7674692 0.937190466 16 56 444 0.903614458 1.273001272 0.313253012 0.26984127 0.445783133 63 5 3 75 X:7674621-7674744 7 ct FBtr0331733|FBtr0071068|FBtr0305134|FBtr0114613 7674616|7674616|7674616|7674616 7678859|7678259|7678259|7678259 TGTGATT 7mer-m1 dme-miR-308-3p X + 7674633 7674749 3'utr ct FlyBase G45026.1 AGAACTAAATATAAATTCAGTGCAATGTGTAGAGAAGCGGAGATGGTTAACGCGTTTACTTGTGATTAAGTTTGAATGTTTAGACGATGTGAGGAGCCAGGAGACATACATACATAT 37 7674692 0.985683366 11 33 271 0.868852459 1.72427587 0.409836066 0.432432432 0.655737705 37 8 0 53 X:7674633-7674749 7 28 6226 FBgn0004198 1981.64 22.68666667 34.95666667 0.014129711 1.234205113 0.800991704 1 1 1 0.01 dme-miR-31a-5p 6mer2-7 CTTGCC X 7674979 7674984 + X_7674979_7674984_+ 1 0.999999053 0.999999527 6.36E-07 ct FBtr0305134|FBtr0114613|FBtr0331733|FBtr0071068 7674616|7674616|7674616|7674616 7678259|7678259|7678859|7678259 X + 7674957 7675005 3'utr ct FlyBase G59557.1 AAACCCCATTTAAGAACCCCGACTTGCCGAAGAACTTTAACCAAAATGT 23 7674981 0.905192614 6 22 69 0.964285714 1.431363764 0.107142857 0.217391304 0.357142857 23 1 0 27 X:7674957-7675005 6 ct FBtr0331733|FBtr0071068|FBtr0305134|FBtr0114613 7674616|7674616|7674616|7674616 7678859|7678259|7678259|7678259 CTTGCC 6mer2-7 dme-miR-31a-5p X + 7674968 7675001 3'utr ct FlyBase G45027.1 AAGAACCCCGACTTGCCGAAGAACTTTAACCAAA 13 7674981 0.847264896 4 12 42 0.944444444 1.230448921 0.111111111 0.384615385 0.555555556 13 1 0 17 X:7674968-7675001 6 17.5 6227 FBgn0004198 1981.64 22.68666667 34.95666667 0.008831069 0.771378196 0.500619815 -2 -2 -2 0.01 dme-miR-14-3p 7mer-m8 AAGACTG X 7675081 7675087 + X_7675081_7675087_+ 0.6717958 0.671780742 0.671788271 1.07E-05 ct FBtr0305134|FBtr0114613|FBtr0331733|FBtr0071068 7674616|7674616|7674616|7674616 7678259|7678259|7678859|7678259 X + 7675061 7675114 3'utr ct FlyBase G59558.1 TTTCGATTTGTTTCTACTTGAAGACTGTAAGCAAAGGCGGTAGGATTGATAACT 27 7675079 0.755817829 9 23 177 0.862068966 1.397940009 0.344827586 0.037037037 0.103448276 27 4 0 25 X:7675061-7675114 7 ct FBtr0331733|FBtr0071068|FBtr0305134|FBtr0114613 7674616|7674616|7674616|7674616 7678859|7678259|7678259|7678259 AAGACTG 7mer-m8 dme-miR-14-3p X + 7675064 7675101 3'utr ct FlyBase G45028.1 CGATTTGTTTCTACTTGAAGACTGTAAGCAAAGGCGGT 13 7675078 0.965829158 6 12 81 0.947368421 1.255272505 0.368421053 0.307692308 0.526315789 13 1 0 18 X:7675064-7675101 7 18.5 6228 FBgn0004198 1981.64 22.68666667 34.95666667 0.009335702 0.81545695 0.529226662 2 3 2.5 0.01 dme-bantam-3p 8mer-A1 TGATCTCA X 7675334 7675341 + X_7675334_7675341_+ 0.631136385 0.631136385 0.631136385 0 ct FBtr0305134|FBtr0114613|FBtr0331733|FBtr0071068 7674616|7674616|7674616|7674616 7678259|7678259|7678859|7678259 X + 7675308 7675352 3'utr ct FlyBase G59559.1 AGCAACCGACTTGTTTAACTATCTTTTGATCTCAAGCAAAAAAAC 101 7675333 0.671724459 7 94 893 0.920634921 1.462397998 0.079365079 0.207920792 0.365079365 101 7 3 116 X:7675308-7675352 8 ct FBtr0331733|FBtr0071068|FBtr0305134|FBtr0114613 7674616|7674616|7674616|7674616 7678859|7678259|7678259|7678259 TGATCTCA 8mer-A1 dme-bantam-3p X + 7675307 7675354 3'utr ct FlyBase G45029.1 CAGCAACCGACTTGTTTAACTATCTTTTGATCTCAAGCAAAAAAACAA 64 7675333 0.97423803 8 60 507 0.944444444 1.62838893 0.033333333 0.34375 0.533333333 64 4 1 85 X:7675307-7675354 8 80 6229 FBgn0004198 1981.64 22.68666667 34.95666667 0.040370602 3.526300323 2.288547726 1 1 1 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 7684309 7684314 - X_7684309_7684314_- 1 1 1 0 CHES-1-like FBtr0112946|FBtr0310287|FBtr0333203 7683456|7682336|7683456 7685914|7685914|7685914 X - 7684251 7684363 3'utr CHES-1-like FlyBase G65414.1 CGAAAGGAAAAAAACTTGACAAAGAACGCCCTAAGTGTTTACACTTCATGTACCTTTTTAGCAAAAAGCAAAAAACGCAAAAGCAAAGATCGCATTAAAATTGTATACATACA 266 7684315 0.989886426 10 259 2554 0.975384615 1.898999271 0.101538462 0.191729323 0.338461538 266 5 3 317 X:7684251-7684363 6 CHES-1-like FBtr0310287|FBtr0333203|FBtr0112946 7682336|7683456|7683456 7685914|7685914|7685914 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X - 7684291 7684360 3'utr CHES-1-like FlyBase G49263.1 AAGGAAAAAAACTTGACAAAGAACGCCCTAAGTGTTTACACTTCATGTACCTTTTTAGCAAAAAGCAAAA 145 7684315 0.968389814 7 139 1381 0.963133641 1.621176282 0.119815668 0.35862069 0.571428571 145 4 4 209 X:7684291-7684360 6 198 6230 FBgn0029504 1761.533333 36.18333333 55.28333333 0.112402074 5.472132658 3.581549593 1 1 1 0.01 dme-miR-318-3p 6mer3-8 CCCAGT X 7684696 7684701 - X_7684696_7684701_- 1 1 1 0 CHES-1-like FBtr0112946|FBtr0310287|FBtr0333203 7683456|7682336|7683456 7685914|7685914|7685914 X - 7684600 7684711 3'utr CHES-1-like FlyBase G65415.1 TTTTGACCTGCCCAGTAACCCCTTCCCTCCGCTCCCCTTCCCATCACGACACTCAAGAAAATGTTAAATCAAAGATATTTAGTTAATAAGCCAGGGAGTAAACCGAAAATCC 63 7684689 0.970437497 10 60 343 0.971830986 1.838849091 0.098591549 0.126984127 0.225352113 63 2 0 69 X:7684600-7684711 6 CHES-1-like FBtr0310287|FBtr0333203|FBtr0112946 7682336|7683456|7683456 7685914|7685914|7685914 CCCAGT 6mer3-8 dme-miR-318-3p X - 7684666 7684719 3'utr CHES-1-like FlyBase G49265.1 CATCCCTATTTTGACCTGCCCAGTAACCCCTTCCCTCCGCTCCCCTTCCCATCA 41 7684689 0.968281502 3 39 220 0.962264151 1.707570176 0.075471698 0.219512195 0.396226415 41 2 0 51 X:7684666-7684719 6 44.5 6231 FBgn0029504 1761.533333 36.18333333 55.28333333 0.025262082 1.229847996 0.804944227 -12 -12 -12 0.01 dme-miR-980-5p 6mer2-7 AAAAAC X 7684821 7684826 - X_7684821_7684826_- 1 1 1 0 CHES-1-like FBtr0112946|FBtr0310287|FBtr0333203 7683456|7682336|7683456 7685914|7685914|7685914 X - 7684750 7684860 3'utr CHES-1-like FlyBase G65416.1 CACATTTAGCGCCTTATATATGGAGTCCTTAGCTAAAAACGAAAGAGAGAAAATGTTGAATTGTTTGAACTGCTTTGTTATACGAATGCATGAGTACATATATATATATAT 21 7684832 0.982409308 11 20 158 0.965517241 1.447158031 0 0.333333333 0.517241379 21 1 0 28 X:7684750-7684860 6 CHES-1-like FBtr0310287|FBtr0333203|FBtr0112946 7682336|7683456|7683456 7685914|7685914|7685914 AAAAAC 6mer2-7 dme-miR-980-5p X - 7684781 7684852 3'utr CHES-1-like FlyBase G49266.1 GCGCCTTATATATGGAGTCCTTAGCTAAAAACGAAAGAGAGAAAATGTTGAATTGTTTGAACTGCTTTGTTA 19 7684832 0.968862603 5 19 125 1 1.556302501 0.305555556 0.631578947 0.805555556 19 0 0 36 X:7684781-7684852 6 9.5 6232 FBgn0029504 1761.533333 36.18333333 55.28333333 0.005393029 0.262551819 0.171842026 6 6 6 0.01 dme-bantam-3p 6mer3-8 TGATCT X 7684962 7684967 - X_7684962_7684967_- 1 1 1 0 CHES-1-like FBtr0112946|FBtr0071079|FBtr0310287|FBtr0333203 7683456|7684885|7682336|7683456 7685914|7685914|7685914|7685914 X - 7684935 7684990 3'utr CHES-1-like FlyBase G65417.1 AGATCCAAAACACCCTACTTACATGATCTAAAAACAAGCGATATAAAAATATATAC 19 7684967 0.963327577 5 18 97 0.95 0.977723605 0 0.052631579 0.1 19 0 1 19 X:7684935-7684990 6 CHES-1-like FBtr0310287|FBtr0333203|FBtr0112946|FBtr0071079 7682336|7683456|7683456|7684885 7685914|7685914|7685914|7685914 TGATCT 6mer3-8 dme-bantam-3p X - 7684941 7684991 3'utr CHES-1-like FlyBase G49267.1 AAGATCCAAAACACCCTACTTACATGATCTAAAAACAAGCGATATAAAAAT 15 7684968 0.683008575 3 12 73 0.807692308 1.322219295 0.076923077 0.466666667 0.692307692 15 5 0 21 X:7684941-7684991 6 16 6233 FBgn0029504 1761.533333 36.18333333 55.28333333 0.009082996 0.442192538 0.289418149 0 1 0.5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 7685585 7685590 - X_7685585_7685590_- 1 0.999999973 0.999999986 0 CHES-1-like FBtr0112946|FBtr0112946|FBtr0112946|FBtr0071079|FBtr0071079|FBtr0071079|FBtr0310287|FBtr0310287|FBtr0310287|FBtr0333203|FBtr0333203|FBtr0333203 7683456|7683456|7683456|7684885|7684885|7684885|7682336|7682336|7682336|7683456|7683456|7683456 7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914 X - 7685564 7685602 3'utr CHES-1-like FlyBase G65419.1 AGGATTTTTTTTCTGTGACTTTACTGTGCCCCGCAATTA 7 7685592 0.99353295 5 7 78 1 1 0.2 0.428571429 0.6 7 0 0 10 X:7685564-7685602 6 CHES-1-like FBtr0310287|FBtr0310287|FBtr0310287|FBtr0333203|FBtr0333203|FBtr0333203|FBtr0112946|FBtr0112946|FBtr0112946|FBtr0071079|FBtr0071079|FBtr0071079 7682336|7682336|7682336|7683456|7683456|7683456|7683456|7683456|7683456|7684885|7684885|7684885 7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X - 7685564 7685605 3'utr CHES-1-like FlyBase G49269.1 TTTAGGATTTTTTTTCTGTGACTTTACTGTGCCCCGCAATTA 13 7685592 0.982777924 6 11 136 1 1.278753601 0.210526316 0.307692308 0.526315789 13 0 0 19 X:7685564-7685605 6 9 6234 FBgn0029504 1761.533333 36.18333333 55.28333333 0.005109185 0.248733303 0.162797709 2 2 2 0.01 dme-miR-277-3p 7mer-A1 GCATTTA X 7685766 7685772 - X_7685766_7685772_- 0.823349562 0.823349562 0.823349562 0 CHES-1-like FBtr0112946|FBtr0071079|FBtr0310287|FBtr0333203 7683456|7684885|7682336|7683456 7685914|7685914|7685914|7685914 X - 7685742 7685850 3'utr CHES-1-like FlyBase G65420.1 CGCCCCCGCCCATACGCCCTCCCGCCCATGCGATCTGTTGTTGTCTCTTTCTAAAGCAAAAATTGTTCAAATCACAGAGCATTTAGACTAAATTTTGTAATCTTAGCAA 164 7685768 0.836038764 17 157 1099 0.964285714 2.276461804 0.020408163 0.152439024 0.290816327 164 7 0 189 X:7685742-7685850 7 CHES-1-like FBtr0310287|FBtr0333203|FBtr0112946|FBtr0071079 7682336|7683456|7683456|7684885 7685914|7685914|7685914|7685914 GCATTTA 7mer-A1 dme-miR-277-3p X - 7685735 7685851 3'utr CHES-1-like FlyBase G49270.1 ACGCCCCCGCCCATACGCCCTCCCGCCCATGCGATCTGTTGTTGTCTCTTTCTAAAGCAAAAATTGTTCAAATCACAGAGCATTTAGACTAAATTTTGTAATCTTAGCAAGTTCATA 93 7685768 0.954212631 14 90 631 0.979020979 2.146128036 0.034965035 0.408602151 0.615384615 93 3 0 140 X:7685735-7685851 7 98.5 6235 FBgn0029504 1761.533333 36.18333333 55.28333333 0.055917193 2.722247812 1.781730479 -4 -4 -4 0.01 dme-miR-190-5p 6mer3-8 ACATAT X 7726119 7726124 - X_7726119_7726124_- 1 1 1 0 NELF-B FBtr0071077 7725994 7726358 X - 7726034 7726186 3'utr NELF-B FlyBase G65430.2 ATAATAATTCTACTGTTTAGACTAAACATAAAGCACTGCGACCGAGCAATCGGATATAGTTTACATATTTACAGAATGTATGGCTTTGTTGGCAGGCATCAATCAGTTGTCGCTGGCTATTATATATATTATATATTACTGTTACGCTAGTGT 32 7726107 0.834899757 14 28 244 0.948717949 1.568201724 0.128205128 0.15625 0.307692308 32 2 0 37 X:7726034-7726186 6 NELF-B FBtr0071077 7725994 7726358 ACATAT 6mer3-8 dme-miR-190-5p X - 7726084 7726176 3'utr NELF-B FlyBase G49276.1 TACTGTTTAGACTAAACATAAAGCACTGCGACCGAGCAATCGGATATAGTTTACATATTTACAGAATGTATGGCTTTGTTGGCAGGCATCAAT 16 7726110 0.987861642 7 14 118 0.884615385 1.361727836 0.192307692 0.5625 0.730769231 16 3 0 23 X:7726084-7726176 6 4 6236 FBgn0027553 119.3333333 6.51 9.91 0.033519553 0.614439324 0.403632694 -17 -14 -15.5 0.01 dme-miR-11-3p 7mer-m1 TGTGATG X 7726296 7726302 - X_7726296_7726302_- 0.612071121 0.612071121 0.612071121 0 NELF-B FBtr0071077 7725994 7726358 X - 7726286 7726320 3'utr NELF-B FlyBase G65431.2 CGGATGATGATGGTTATTTGTGATGATGATGTTGA 20 7726304 0.669886148 3 18 182 0.923076923 1.079181246 0.615384615 0.2 0.384615385 20 1 1 24 X:7726286-7726320 7 NELF-B FBtr0071077 7725994 7726358 TGTGATG 7mer-m1 dme-miR-11-3p X - 7726259 7726331 3'utr NELF-B FlyBase G49277.1 GCGGCTGTCGTCGGATGATGATGGTTATTTGTGATGATGATGTTGATGTTGATGATGATGATCGGAGGCCATG 16 7726304 0.987456345 8 16 147 1 1.447158031 0.571428571 0.4375 0.678571429 16 0 0 28 X:7726259-7726331 7 16 6237 FBgn0027553 119.3333333 6.51 9.91 0.134078212 2.457757296 1.614530777 2 2 2 0.01 dme-miR-79-3p 8mer-A1 TAGCTTTA X 7731283 7731290 + X_7731283_7731290_+ 0.625364009 0.625364009 0.625364009 0 CG12155 FBtr0071071 7731144 7731729 X + 7731255 7731350 3'utr CG12155 FlyBase G59573.1 CAAGTTCGTGGATTCCGCGTTCTTCAATTAGCTTTATCCTCCACCCACGAAACCCCGGATCCCTGTATCCTTCACCCCTCTACACCATCCATTCGA 107 7731282 0.814626075 8 104 1026 0.965811966 1.752048448 0.042735043 0.08411215 0.162393162 107 3 1 113 X:7731255-7731350 8 CG12155 FBtr0071071 7731144 7731729 TAGCTTTA 8mer-A1 dme-miR-79-3p X + 7731218 7731303 3'utr CG12155 FlyBase G45038.1 ATGTATAGGATTAGGATGCGTACCGTTTACCAGTTTGCAAGTTCGTGGATTCCGCGTTCTTCAATTAGCTTTATCCTCCACCCACG 46 7731282 0.990999509 5 43 450 0.935483871 1.286306739 0.096774194 0.260869565 0.451612903 46 2 2 58 X:7731218-7731303 8 72 6238 FBgn0029957 249.8233333 11.22666667 17.11333333 0.288203664 6.413301663 4.207245812 1 1 1 0.01 dme-bantam-3p 6mer3-8 TGATCT X 7731482 7731487 + X_7731482_7731487_+ 1 1 1 0 CG12155 FBtr0071071 7731144 7731729 X + 7731442 7731526 3'utr CG12155 FlyBase G59574.1 ATTCGAAATTCTTAAAGTTGAATAGCTTGTTTGCAACAGATGATCTATACCTAAGTCTTAGGATTATCCTGGTTTCCCCCCCGTT 12 7731482 0.980772549 5 12 87 1 1.113943352 0.076923077 0.083333333 0.153846154 12 0 0 13 X:7731442-7731526 6 CG12155 FBtr0071071 7731144 7731729 TGATCT 6mer3-8 dme-bantam-3p X + 7731461 7731498 3'utr CG12155 FlyBase G45039.1 GAATAGCTTGTTTGCAACAGATGATCTATACCTAAGTC 6 7731482 0.879340714 2 5 39 0.9 0.954242509 0 0.5 0.7 6 1 0 9 X:7731461-7731498 6 6 6239 FBgn0029957 249.8233333 11.22666667 17.11333333 0.024016972 0.534441805 0.350603818 0 0 0 0.01 dme-miR-184-5p 6mer2-7 GATAAG X 7893280 7893285 - X_7893280_7893285_- 1 1 1 0 CG45089 FBtr0344536|FBtr0344535|FBtr0344537 7893051|7893051|7893051 7893321|7893321|7893321 X - 7893246 7893320 3'utr CG45089 FlyBase G65454.1 AGGATACACAAATATACACCATGGTCTTGGGACTGGATAAGCGAGCACTGTGGGGCGCGTTGCCCCTGCTGGGAT 18 7893299 0.969552497 5 18 103 1 1.361727836 0.130434783 0.222222222 0.391304348 18 0 0 23 X:7893246-7893320 6 CG45089 FBtr0344537|FBtr0344535|FBtr0344536 7893051|7893051|7893051 7893321|7893321|7893321 GATAAG 6mer2-7 dme-miR-184-5p X - 7893223 7893311 3'utr CG45089 FlyBase G49290.1 AAATATACACCATGGTCTTGGGACTGGATAAGCGAGCACTGTGGGGCGCGTTGCCCCTGCTGGGATTTGCCATTGGCCACTTCCTGGAC 18 7893299 0.973644338 7 17 106 0.966666667 1.462397998 0 0.444444444 0.666666667 18 1 0 29 X:7893223-7893311 6 12.5 6240 FBgn0266490 26.05333333 6.416666667 9.95 0.479785056 1.948051948 1.256281407 14 14 14 0.01 dme-miR-34-5p 6mer2-7 ACTGCC X 7896695 7896700 + X_7896695_7896700_+ 1 1 1 0 p115 FBtr0071089|FBtr0340162 7896636|7896636 7896786|7896991 X + 7896672 7896711 3'utr p115 FlyBase G59609.2 ATGTTACAACTGGAAATTGCTCGACTGCCCTAAAAACGTT 35 7896691 0.671608008 7 28 170 0.829268293 0.929418926 0.024390244 0.114285714 0.243902439 35 4 3 34 X:7896672-7896711 6 p115 FBtr0071089|FBtr0340162 7896636|7896636 7896786|7896991 ACTGCC 6mer2-7 dme-miR-34-5p X + 7896649 7896708 3'utr p115 FlyBase G45057.1 CGGATGAGTTGCTAGCCACGTACATGTTACAACTGGAAATTGCTCGACTGCCCTAAAAAC 28 7896690 0.971030347 6 25 144 0.885714286 0.792391689 0 0.214285714 0.371428571 28 0 4 31 X:7896649-7896708 6 28.5 6241 FBgn0040087 268.6666667 11.33 17.27666667 0.106079404 2.515445719 1.64962377 4 5 4.5 0.01 dme-miR-12-5p 6mer2-7 ATACTC X 7917678 7917683 + X_7917678_7917683_+ 1 1 1 0 snz FBtr0340148 7917322 7918444 X + 7917669 7917720 3'utr snz FlyBase G59650.2 GTTGTTTATATACTCGTATAGTAAATTGTGACACTCAGTTTGGATTGATTTT 43 7917695 0.748321631 8 38 313 0.980392157 1.698970004 0.078431373 0.139534884 0.274509804 43 1 0 50 X:7917669-7917720 6 snz FBtr0340148 7917322 7918444 ATACTC 6mer2-7 dme-miR-12-5p X + 7917629 7917884 3'utr snz FlyBase G45096.1 ATGTCTGTACATAGGTCAGTATTAAGCGTTGTACCAAATCGTTGTTTATATACTCGTATAGTAAATTGTGACACTCAGTTTGGATTGATTTTAATTATAGTTTAGTAGCAGATATTGAGCCCAAAGTTGCGTCTGCAGCTGGCGTTGAGTCGGTGCTTGTGATTCCCATGCCGCGCCAGCTGTAGATCCATCCTCCCCCCAAAAATATTATAGAAACACAACAGGTGAGATTAGTTTGAGGCAAGCTAATGGGCGT 85 7917695 0.98175114 30 83 615 0.978417266 1.656417654 0.26618705 0.435294118 0.654676259 85 1 2 136 X:7917629-7917884 6 20.5 6242 FBgn0029976 1160.15 26.41 40.25666667 0.017670129 0.776221128 0.509232425 -17 -17 -17 0.01 dme-miR-282-5p 6mer2-7 GAGGCT X 7918075 7918080 + X_7918075_7918080_+ 1 1 1 0 snz FBtr0340148 7917322 7918444 X + 7918059 7918111 3'utr snz FlyBase G59652.1 AGACTAAGCGTTGATTGAGGCTGTCTTAAAAAACAGAACGTTTGATAACACAA 13 7918073 0.981191067 6 12 83 0.944444444 1.230448921 0.111111111 0.307692308 0.5 13 1 0 17 X:7918059-7918111 6 snz FBtr0340148 7917322 7918444 GAGGCT 6mer2-7 dme-miR-282-5p X + 7918018 7918096 3'utr snz FlyBase G45097.1 CCTAATTGACCAAAATTGGTAATGGTATCAAATAATCTTAAAGACTAAGCGTTGATTGAGGCTGTCTTAAAAAACAGAA 10 7918073 0.982909668 5 10 78 1 1.113943352 0 0.3 0.461538462 10 0 0 13 X:7918018-7918096 6 9.5 6243 FBgn0029976 1160.15 26.41 40.25666667 0.008188596 0.35971223 0.235985758 2 2 2 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA X 7921540 7921545 + X_7921540_7921545_+ 1 1 1 0 Ykt6 FBtr0071093 7921363 7921966 X + 7921513 7921557 3'utr Ykt6 FlyBase G59657.1 TCCAAGGGAGCGGTGCGACTTGGGCTTTGATGATTGCTTTTTATA 9 7921553 0.986336974 6 9 81 1 0.954242509 0.111111111 0 0 9 0 0 9 X:7921513-7921557 6 Ykt6 FBtr0071093 7921363 7921966 TGATGA 6mer3-8 dme-miR-2a-2-5p X + 7921502 7921564 3'utr Ykt6 FlyBase G45102.1 ACCAAACAAACTCCAAGGGAGCGGTGCGACTTGGGCTTTGATGATTGCTTTTTATAAATGAAT 11 7921533 0.984549538 6 10 82 1 1.255272505 0.111111111 0.454545455 0.666666667 11 0 0 18 X:7921502-7921564 6 5.5 6244 FBgn0260858 601.62 50.32 77.46 0.009141983 0.109300477 0.071004389 -13 7 -3 0.01 dme-miR-965-3p 7mer-m8 TACGCTT X 7921678 7921684 + X_7921678_7921684_+ 0.620204855 0.620204855 0.620204855 0 Ykt6 FBtr0071093 7921363 7921966 X + 7921667 7921705 3'utr Ykt6 FlyBase G59658.1 CTGTATATGTCTACGCTTTGGATATCTAAATGTTAATTA 26 7921685 0.741762841 5 25 216 0.975 1.591064607 0.025 0.461538462 0.65 26 1 0 39 X:7921667-7921705 7 Ykt6 FBtr0071093 7921363 7921966 TACGCTT 7mer-m8 dme-miR-965-3p X + 7921663 7921697 3'utr Ykt6 FlyBase G45103.1 CTGTCTGTATATGTCTACGCTTTGGATATCTAAAT 12 7921685 0.648547452 3 12 103 1 1.278753601 0 0.5 0.684210526 12 0 0 19 X:7921663-7921697 7 19 6245 FBgn0260858 601.62 50.32 77.46 0.031581397 0.377583466 0.245287891 -7 -7 -7 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 7922994 7923000 - X_7922994_7923000_- 0.801970437 0.801970437 0.801970437 0 CG10777 FBtr0071132|FBtr0071132|FBtr0071132 7922156|7922156|7922156 7927227|7927227|7927227 X - 7922982 7923020 3'utr CG10777 FlyBase G65464.1 AAGTTGAAACCAAAACCCATTGTGATAACAGCTGCGTAA 51 7923001 0.861246483 3 48 219 0.945454545 1.238882089 0.036363636 0.078431373 0.145454545 51 1 2 52 X:7922982-7923020 7 CG10777 FBtr0071132|FBtr0071132|FBtr0071132 7922156|7922156|7922156 7927227|7927227|7927227 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 7922951 7923017 3'utr CG10777 FlyBase G49299.1 TTGAAACCAAAACCCATTGTGATAACAGCTGCGTAAACGAAACACGTTAGAACCTTACTTGTACGTA 34 7923001 0.941499744 3 32 131 0.960784314 1.213074825 0.078431373 0.411764706 0.607843137 34 0 2 49 X:7922951-7923017 7 41.5 6246 FBgn0029979 3423.163333 51.95333333 79.74333333 0.012123289 0.798793789 0.52041968 1 1 1 0.01 dme-miR-184-5p 6mer3-8 TGATAA X 7924036 7924041 - X_7924036_7924041_- 1 1 1 0 CG10777 FBtr0071132 7922156 7927227 X - 7924019 7924067 3'utr CG10777 FlyBase G65465.1 AAAAAAAGAGCAAAAGAAGTTGAAACTGATAAAATTTAAGAGTAACTGA 23 7924048 0.971202781 3 19 111 0.84 1.021189299 0.04 0.086956522 0.16 23 3 1 21 X:7924019-7924067 6 CG10777 FBtr0071132 7922156 7927227 TGATAA 6mer3-8 dme-miR-184-5p X - 7923985 7924066 3'utr CG10777 FlyBase G49301.1 AAAAAAGAGCAAAAGAAGTTGAAACTGATAAAATTTAAGAGTAACTGAAACCGAAAGCCCCCAAAAACTGAGGGAGGAAAGC 17 7924047 0.964270421 4 16 79 0.954545455 1.322219295 0.045454545 0.235294118 0.409090909 17 1 0 21 X:7923985-7924066 6 19 6247 FBgn0029979 3423.163333 51.95333333 79.74333333 0.005550422 0.365712819 0.238264432 7 6 6.5 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA X 7924526 7924531 - X_7924526_7924531_- 0.999947112 0.999813093 0.999880102 9.48E-05 CG10777 FBtr0344137|FBtr0071132 7924137|7922156 7927227|7927227 X - 7924489 7924558 3'utr CG10777 FlyBase G65468.1 AATTATGATTTTGATGCAACCGAATTGTGATGATGTGATAGACTTATATAAACAAACGAAAATACAAAAA 364 7924520 0.807271543 10 345 2483 0.943478261 1.407040808 0.519565217 0.197802198 0.365217391 364 10 16 434 X:7924489-7924558 6 CG10777 FBtr0071132|FBtr0344137 7922156|7924137 7927227|7927227 TGATGA 6mer3-8 dme-miR-2a-2-5p X - 7924488 7924554 3'utr CG10777 FlyBase G49303.1 ATGATTTTGATGCAACCGAATTGTGATGATGTGATAGACTTATATAAACAAACGAAAATACAAAAAT 291 7924520 0.979076325 10 287 1966 0.981351981 2.3232521 0.524475524 0.374570447 0.575757576 291 7 1 421 X:7924488-7924554 6 322 6248 FBgn0029979 3423.163333 51.95333333 79.74333333 0.094065041 6.197869883 4.037955106 -11 -11 -11 0.01 dme-bantam-3p 6mer2-7 GATCTC X 7924792 7924797 - X_7924792_7924797_- 1 1 1 0 CG10777 FBtr0344137|FBtr0071132 7924137|7922156 7927227|7927227 X - 7924715 7924864 3'utr CG10777 FlyBase G65470.1 AAATAAATAAAAATCGGGGAAAACAAACGGAAATATTTATATATGTAGGGTATATCGTCAACACAAGGATCTCTTTTTAAAGCAAACGAACGGAAGACTCGAATTCTTCTATATAGACCTATAATTCATAGAGAAGCTCGCTTTTATTTC 405 7924791 0.936620353 19 391 2899 0.967935872 1.90579588 0.172344689 0.192592593 0.344689379 405 11 5 483 X:7924715-7924864 6 CG10777 FBtr0071132|FBtr0344137 7922156|7924137 7927227|7927227 GATCTC 6mer2-7 dme-bantam-3p X - 7924766 7924900 3'utr CG10777 FlyBase G49306.1 TGTATAAGTTCTCTACGTATACGGTTTCTTTTTAGCAAATAAATAAAAATCGGGGAAAACAAACGGAAATATTTATATATGTAGGGTATATCGTCAACACAAGGATCTCTTTTTAAAGCAAACGAACGGAAGACT 286 7924790 0.982719748 18 277 2083 0.965909091 2.62838893 0.106818182 0.388111888 0.602272727 286 15 0 425 X:7924766-7924900 6 325 6249 FBgn0029979 3423.163333 51.95333333 79.74333333 0.094941424 6.255614013 4.075575806 -6 -7 -6.5 0.01 dme-miR-932-5p 7mer-m8 GGAATTG X 7925012 7925018 - X_7925012_7925018_- 0.702967944 0.70297287 0.702970407 3.54E-06 CG10777 FBtr0344137|FBtr0071132 7924137|7922156 7927227|7927227 X - 7924926 7925127 3'utr CG10777 FlyBase G65471.1 AGTTGTCCATGTTGTTGCAAGCAGTGCGTTATCCTCGCCACGGGAAAGCAGTACAAAAATCCGAAGAATTTTGGGAAAACGTAACGGACACAAGGGAATATTCTACAGTGGAATTGTATGAGAACAAGAACACAAGGAAAATATATGAAAAGTCATGTAGATTATATTAGAAATATATTTGTTAGCCGATCGGGGGGTGTGA 42 7925029 0.991735782 15 38 220 0.918367347 1.352182518 0.244897959 0.142857143 0.265306122 42 3 1 45 X:7924926-7925127 7 CG10777 FBtr0071132|FBtr0344137 7922156|7924137 7927227|7927227 GGAATTG 7mer-m8 dme-miR-932-5p X - 7924927 7925048 3'utr CG10777 FlyBase G49307.1 CGTAACGGACACAAGGGAATATTCTACAGTGGAATTGTATGAGAACAAGAACACAAGGAAAATATATGAAAAGTCATGTAGATTATATTAGAAATATATTTGTTAGCCGATCGGGGGGTGTG 32 7925028 0.918822016 14 27 195 0.829787234 1.290034611 0.191489362 0.375 0.574468085 32 7 1 39 X:7924927-7925048 7 4 6250 FBgn0029979 3423.163333 51.95333333 79.74333333 0.00116851 0.076992172 0.050160933 11 10 10.5 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT X 7925176 7925182 - X_7925176_7925182_- 0.658999527 0.658999527 0.658999527 0 CG10777 FBtr0344137|FBtr0071132 7924137|7922156 7927227|7927227 X - 7925147 7925210 3'utr CG10777 FlyBase G65472.1 GAGTAAATTAGTAGTAGTAACATTAATTGGCAGCTCCAGTCATATAGTTAGCAGTAATATATCC 750 7925184 0.821555035 10 731 5949 0.972619048 2.213252052 0.082142857 0.106666667 0.202380952 750 19 4 817 X:7925147-7925210 7 CG10777 FBtr0071132|FBtr0344137 7922156|7924137 7927227|7927227 GGCAGCT 7mer-m8 dme-miR-980-3p X - 7925119 7925210 3'utr CG10777 FlyBase G49308.1 GAGTAAATTAGTAGTAGTAACATTAATTGGCAGCTCCAGTCATATAGTTAGCAGTAATATATCCATATATCGTCTGTTCAAGCAGTTGTCCA 547 7925184 0.983931593 11 536 4195 0.978773585 2.317018101 0.091981132 0.402193784 0.614386792 547 15 3 830 X:7925119-7925210 7 639 6251 FBgn0029979 3423.163333 51.95333333 79.74333333 0.186669445 12.29949955 8.013209046 2 2 2 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC X 7926874 7926880 - X_7926874_7926880_- 0.661615645 0.661615645 0.661615645 0 CG10777 FBtr0344137|FBtr0071132 7924137|7922156 7927227|7927227 X - 7926853 7926946 5'utr CG10777 FlyBase G65475.1 ACCAAAATCGTTGCCTTTTTGTTTCTATATTTATTCACACCTCACTACTAATATTAGTAGAACATTTGTGTTCTCTTTCGCTTATTTAAGCATT 18 7926881 0.92980884 7 18 193 1 1.380211242 0 0.333333333 0.5 18 0 0 24 X:7926853-7926946 7 CG10777 FBtr0071132|FBtr0344137 7922156|7924137 7927227|7927227 TGTGTTC 7mer-m8 dme-miR-317-3p X - 7926857 7926893 5'utr CG10777 FlyBase G49309.1 TTAGTAGAACATTTGTGTTCTCTTTCGCTTATTTAAG 6 7926881 0.983584543 3 6 64 1 0.954242509 0.111111111 0.333333333 0.555555556 6 0 0 9 X:7926857-7926893 7 9.5 6252 FBgn0029979 3423.163333 51.95333333 79.74333333 0.002775211 0.18285641 0.119132216 1 1 1 0.01 dme-miR-184-5p 7mer-m8 TGATAAG X 7931759 7931765 - X_7931759_7931765_- 0.658999343 0.658999343 0.658999343 0 CG10778 FBtr0071131|FBtr0331433 7931743|7931743 7932048|7932048 X - 7931756 7931792 3'utr CG10778 FlyBase G65488.1 GGTCGTAAAAAGTGTTTGCCTTCCATTTGATAAGTAA 11 7931777 0.957467702 5 11 97 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 X:7931756-7931792 7 CG10778 FBtr0331433|FBtr0071131 7931743|7931743 7932048|7932048 TGATAAG 7mer-m8 dme-miR-184-5p X - 7931763 7931792 3'utr CG10778 FlyBase G49319.1 GGTCGTAAAAAGTGTTTGCCTTCCATTTGA 11 7931776 0.677871643 3 11 93 1 1.301029996 0.1 0.545454545 0.75 11 0 0 20 X:7931763-7931792 2 11 6253 FBgn0029980 75 7.353333333 11.31333333 0.146666667 1.495920218 0.972304066 12 11 11.5 0.01 dme-miR-92b-3p 7mer-A1 TGCAATA X 7931912 7931918 - X_7931912_7931918_- 0.782911824 0.782911824 0.782911824 0 CG10778 FBtr0071131|FBtr0331433 7931743|7931743 7932048|7932048 X - 7931913 7932048 3'utr CG10778 FlyBase G65491.1 GTCCCTTCTGAAGTCCCGCCTGAAGTCCCTTCGATTTCCACATGATGATGATGTTTGTGATATCAGTGGGGAATAAAATCGTGTAAATAGCGTATACCTGTACGTACAGATGCTACTGTTTTCCGGCCTATGCAAT 37 7931928 0.891486055 15 36 287 0.976190476 1.612783857 0.30952381 0.135135135 0.238095238 37 1 0 41 X:7931913-7932048 5 CG10778 FBtr0331433|FBtr0071131 7931743|7931743 7932048|7932048 TGCAATA 7mer-A1 dme-miR-92b-3p X - 7931914 7931964 3'utr CG10778 FlyBase G49320.1 AAATAGCGTATACCTGTACGTACAGATGCTACTGTTTTCCGGCCTATGCAA 20 7931928 0.887193319 5 19 141 1 1.380211242 0.458333333 0.15 0.291666667 20 0 0 24 X:7931914-7931964 4 15.5 6254 FBgn0029980 75 7.353333333 11.31333333 0.206666667 2.107887579 1.37006482 10 10 10 0.01 dme-miR-33-5p 6mer2-7 AATGCA X 7953124 7953129 + X_7953124_7953129_+ 0.999999992 1 0.999999996 0 CG42593 FBtr0301748|FBtr0331298|FBtr0331299 7952244|7952295|7952244 7953883|7953883|7953883 X + 7953099 7953175 3'utr CG42593 FlyBase G59695.1 ACAATAAACGAAAAGCGAATTGTGAAATGCATAGAAACTAGTTTGCATGCCCCATTATACATAAATATTATGTAATT 258 7953118 0.822940245 7 254 979 0.981308411 2.498310554 0.23364486 0.201550388 0.358255452 258 6 0 315 X:7953099-7953175 6 CG42593 FBtr0331299|FBtr0331298|FBtr0301748 7952244|7952295|7952244 7953883|7953883|7953883 AATGCA 6mer2-7 dme-miR-33-5p X + 7953057 7953160 3'utr CG42593 FlyBase G45130.1 ATTGCAACATAAACGAAAAATGATACAAAAAAAAAAAAAAAAACAATAAACGAAAAGCGAATTGTGAAATGCATAGAAACTAGTTTGCATGCCCCATTATACAT 207 7953118 0.935431087 8 203 772 0.986531987 2.165837625 0.259259259 0.29468599 0.508417508 207 3 1 293 X:7953057-7953160 6 228.5 6255 FBgn0260970 1474.483333 18.93666667 29.07666667 0.154969537 12.06653758 7.858534908 6 6 6 0.01 dme-miR-988-3p 7mer-m1 CAAGGGG X 8038178 8038184 - X_8038178_8038184_- 0.825232422 0.825582373 0.825407398 0.000247487 fs(1)h FBtr0333307 8037806 8040978 X - 8038141 8038191 3'utr fs(1)h FlyBase G65538.1 AGAAAATCAAGGGGGAAACTAGTTTTCGCTGGCAGAAAGGGTGGATATAGA 12 8038167 0.65142481 5 12 67 1 1.176091259 0.066666667 0.166666667 0.333333333 12 0 0 15 X:8038141-8038191 7 fs(1)h FBtr0333307 8037806 8040978 CAAGGGG 7mer-m1 dme-miR-988-3p X - 8038144 8038184 3'utr fs(1)h FlyBase G49353.1 CAAGGGGGAAACTAGTTTTCGCTGGCAGAAAGGGTGGATAT 6 8038168 0.960655923 3 6 32 1 1 0 0.333333333 0.6 6 0 0 10 X:8038144-8038184 7 7 6256 FBgn0004656 6894.06 89.92333333 138.4833333 0.001015367 0.077844089 0.050547599 -17 -16 -16.5 0.01 dme-miR-304-5p 8mer-A1 TGAGATTA X 8039152 8039159 - X_8039152_8039159_- 0.625363359 0.625363359 0.625363359 0 fs(1)h FBtr0071119|FBtr0333307 8038789|8037806 8040978|8040978 X - 8039141 8039193 3'utr fs(1)h FlyBase G65542.1 AAGAGCGATGAATTGTGGAACTGCAGGGTGTGGTTGAGATTAGGGATGCGTGT 15 8039160 0.731731998 4 15 101 1 1.176091259 0.4 0 0 15 0 0 15 X:8039141-8039193 8 fs(1)h FBtr0333307|FBtr0071119 8037806|8038789 8040978|8040978 TGAGATTA 8mer-A1 dme-miR-304-5p X - 8039131 8039177 3'utr fs(1)h FlyBase G49356.1 GGAACTGCAGGGTGTGGTTGAGATTAGGGATGCGTGTTTGTCTTTGT 5 8039160 0.981040276 3 4 36 0.9 0.954242509 0.4 0.4 0.7 5 1 0 9 X:8039131-8039177 8 7.5 6257 FBgn0004656 6894.06 89.92333333 138.4833333 0.001087893 0.083404382 0.054158142 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG X 8040319 8040324 - X_8040319_8040324_- 1 1 1 0 fs(1)h FBtr0071119|FBtr0333307 8038789|8037806 8040978|8040978 X - 8040256 8040469 3'utr fs(1)h FlyBase G65547.1 AAAAAAAATGGCAAATTTCCTTCGGTTAGCAAATGATTCTTCGCAATTTTTTTAAAAATCACTTACCATCTCGCTTATTATTTTGTATTAAAATTACGATTATGATGATAATGGATCGTGGCGACAAAGATGTCCGCACATGTTTCCAAAGCTTATTATTTTTAATATTATTGATTGCCTAGGCAAGTTTAGTTCGTAGGTATACACTTAATTG 59 8040327 0.854125527 29 55 523 0.893333333 1.826074803 0.253333333 0.220338983 0.386666667 59 8 0 67 X:8040256-8040469 6 fs(1)h FBtr0333307|FBtr0071119 8037806|8038789 8040978|8040978 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" X - 8040303 8040339 3'utr fs(1)h FlyBase G49359.2 TGTCCGCACATGTTTCCAAAGCTTATTATTTTTAATA 10 8040327 0.670952118 3 8 100 0.823529412 1.146128036 0 0.5 0.705882353 10 3 0 14 X:8040303-8040339 6 11 6258 FBgn0004656 6894.06 89.92333333 138.4833333 0.001595576 0.122326426 0.079431941 3 3 3 0.01 dme-miR-184-5p 6mer3-8 TGATAA X 8040359 8040364 - X_8040359_8040364_- 0.837261969 0.99999997 0.91863097 0.115073143 fs(1)h FBtr0071119|FBtr0333307 8038789|8037806 8040978|8040978 X - 8040256 8040469 3'utr fs(1)h FlyBase G65547.1 AAAAAAAATGGCAAATTTCCTTCGGTTAGCAAATGATTCTTCGCAATTTTTTTAAAAATCACTTACCATCTCGCTTATTATTTTGTATTAAAATTACGATTATGATGATAATGGATCGTGGCGACAAAGATGTCCGCACATGTTTCCAAAGCTTATTATTTTTAATATTATTGATTGCCTAGGCAAGTTTAGTTCGTAGGTATACACTTAATTG 59 8040366 0.854125527 29 55 523 0.893333333 1.826074803 0.253333333 0.220338983 0.386666667 59 8 0 67 X:8040256-8040469 6 fs(1)h FBtr0333307|FBtr0071119 8037806|8038789 8040978|8040978 TGATAA 6mer3-8 dme-miR-184-5p X - 8040342 8040369 3'utr fs(1)h FlyBase G49360.1 TATGATGATAATGGATCGTGGCGACAAA 8 8040360 0.600155971 4 8 37 1 0.954242509 0.222222222 0.125 0.222222222 8 0 0 9 X:8040342-8040369 6 12 6259 FBgn0004656 6894.06 89.92333333 138.4833333 0.001740629 0.13344701 0.086653027 2 -4 -1 0.01 dme-miR-2a-2-5p 7mer-A1 GATGAGA X 8046340 8046346 - X_8046340_8046346_- 0.782911824 0.782911824 0.782911824 0 fs(1)h FBtr0333309|FBtr0333308|FBtr0071118|FBtr0071120|FBtr0071121|FBtr0071122 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 X - 8046284 8046370 3'utr fs(1)h FlyBase G65562.1 TACAAAAAAAAAATGCATAGAAGAGATGAGAATGATTGATGATATGACGAGATGATAATGCAATGGAAATAAAGAAAATTTAAAAAA 104 8046344 0.96699543 11 102 514 0.967479675 2.075546961 0.268292683 0.163461538 0.292682927 104 4 0 119 X:8046284-8046370 7 fs(1)h FBtr0071121|FBtr0071122|FBtr0071120|FBtr0071118|FBtr0333309|FBtr0333308 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 GATGAGA 7mer-A1 dme-miR-2a-2-5p X - 8046301 8046357 3'utr fs(1)h FlyBase G49370.1 TGCATAGAAGAGATGAGAATGATTGATGATATGACGAGATGATAATGCAATGGAAAT 53 8046344 0.944576293 6 45 242 0.897727273 1.420505837 0.170454545 0.433962264 0.659090909 53 7 2 79 X:8046301-8046357 7 60 6260 FBgn0004656 6894.06 89.92333333 138.4833333 0.008703144 0.667235052 0.433265134 -2 -2 -2 0.01 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 8047748 8047754 - X_8047748_8047754_- 0.661615511 0.661615511 0.661615511 0 fs(1)h FBtr0333309|FBtr0333308|FBtr0071118|FBtr0071120|FBtr0071121|FBtr0071122 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 X - 8047694 8047777 3'utr fs(1)h FlyBase G65563.1 TCTGTGCCAATTTCACATGTTTTTCTAGTCCTGTTTCTTGATAATTCAAATGTGTTAATCCAAGCTCCATTGTGACGATCCCTA 40 8047755 0.902335445 6 39 459 1 1.681241237 0.0625 0.125 0.270833333 40 0 0 48 X:8047694-8047777 7 fs(1)h FBtr0071121|FBtr0071122|FBtr0071120|FBtr0071118|FBtr0333309|FBtr0333308 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X - 8047736 8047769 3'utr fs(1)h FlyBase G49371.1 AATTTCACATGTTTTTCTAGTCCTGTTTCTTGAT 31 8047755 0.691819958 6 31 369 1 1.681241237 0.041666667 0.419354839 0.625 31 0 0 48 X:8047736-8047769 7 33 6261 FBgn0004656 6894.06 89.92333333 138.4833333 0.004786729 0.366979279 0.238295824 1 1 1 0.01 dme-miR-282-5p 6mer3-8 AGAGGC X 8048006 8048011 - X_8048006_8048011_- 0.999993137 0.966653254 0.983323196 0.023574799 fs(1)h FBtr0333309|FBtr0333308|FBtr0071118|FBtr0071120|FBtr0071121|FBtr0071122 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 X - 8047965 8048028 3'utr fs(1)h FlyBase G65564.1 ATGAGTATATATATCTCAGAGGCAGCTTACTAGCAATCTTCATCGATCATCATTATATCCATTC 37 8048000 0.978616371 5 33 229 0.871794872 1.054357662 0.025641026 0.054054054 0.102564103 37 3 2 34 X:8047965-8048028 6 fs(1)h FBtr0071121|FBtr0071122|FBtr0071120|FBtr0071118|FBtr0333309|FBtr0333308 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 AGAGGC 6mer3-8 dme-miR-282-5p X - 8047953 8048028 3'utr fs(1)h FlyBase G49372.1 ATGAGTATATATATCTCAGAGGCAGCTTACTAGCAATCTTCATCGATCATCATTATATCCATTCACCACTCCCCCA 30 8048000 0.975591747 7 27 176 0.913043478 1.62324929 0 0.433333333 0.630434783 30 4 0 42 X:8047953-8048028 6 32 6262 FBgn0004656 6894.06 89.92333333 138.4833333 0.004641677 0.355858694 0.231074738 -11 -11 -11 0.01 dme-miR-980-3p 6mer3-8 GGCAGC X 8048310 8048315 - X_8048310_8048315_- 1 1 1 0 fs(1)h FBtr0333309|FBtr0333308|FBtr0071118|FBtr0071120|FBtr0071121|FBtr0071122 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 X - 8048297 8048341 3'utr fs(1)h FlyBase G65565.1 AAATCGTGAAGCAATTGTGTATTGGGGGCAGCCAATTTGAAAAAG 13 8048327 0.845826529 5 12 89 1 1.113943352 0.461538462 0 0 13 0 0 13 X:8048297-8048341 6 fs(1)h FBtr0071121|FBtr0071122|FBtr0071120|FBtr0071118|FBtr0333309|FBtr0333308 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 GGCAGC 6mer3-8 dme-miR-980-3p X - 8048308 8048337 3'utr fs(1)h FlyBase G49373.1 CGTGAAGCAATTGTGTATTGGGGGCAGCCA 6 8048325 0.95011159 4 5 36 0.875 0.84509804 0.25 0.333333333 0.5 6 1 0 7 X:8048308-8048337 6 9.5 6263 FBgn0004656 6894.06 89.92333333 138.4833333 0.001377998 0.10564555 0.068600313 12 10 11 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA X 8049214 8049219 - X_8049214_8049219_- 1 0.999953465 0.999976732 3.29E-05 fs(1)h FBtr0333309|FBtr0333308|FBtr0071118|FBtr0071120|FBtr0071121|FBtr0071122 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 X - 8049208 8049247 3'utr fs(1)h FlyBase G65569.1 AAATTGAAACTTCCATTTGCCAATCGTCTGATGACTGATA 6 8049231 0.964691336 4 4 49 0.625 0.698970004 0 0.333333333 0.5 6 3 0 5 X:8049208-8049247 6 fs(1)h FBtr0071121|FBtr0071122|FBtr0071120|FBtr0071118|FBtr0333309|FBtr0333308 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 TGATGA 6mer3-8 dme-miR-2a-2-5p X - 8049206 8049233 3'utr fs(1)h FlyBase G49376.1 ATTTGCCAATCGTCTGATGACTGATATG 6 8049231 0.738476468 5 5 39 0.8 0.903089987 0 0.5 0.7 6 2 0 8 X:8049206-8049233 6 6 6264 FBgn0004656 6894.06 89.92333333 138.4833333 0.000870314 0.066723505 0.043326513 12 12 12 0.01 dme-miR-34-5p 7mer-A1 ACTGCCA X 8069173 8069179 + X_8069173_8069179_+ 0.815350342 0.822849887 0.819100115 0.005303018 mys FBtr0340135|FBtr0340137|FBtr0071105|FBtr0340136 8068934|8068934|8068934|8068934 8070237|8070237|8070237|8070237 X + 8069129 8069211 3'utr mys FlyBase G59706.1 CATCGACGAAGCTGCTTTGCCCGGGTGCAAAACCACTGAAGTCAACTGCCATTGAAACGCGTTCTAAACTAAGTCAGCCCTAT 68 8069180 0.844709416 8 68 285 1 1.986771734 0.195876289 0.294117647 0.505154639 68 0 0 97 X:8069129-8069211 7 mys FBtr0071105|FBtr0340136|FBtr0340135|FBtr0340137 8068934|8068934|8068934|8068934 8070237|8070237|8070237|8070237 ACTGCCA 7mer-A1 dme-miR-34-5p X + 8069133 8069209 3'utr mys FlyBase G45139.1 GACGAAGCTGCTTTGCCCGGGTGCAAAACCACTGAAGTCAACTGCCATTGAAACGCGTTCTAAACTAAGTCAGCCCT 63 8069180 0.949332646 11 62 269 0.990196078 2.004321374 0.264705882 0.428571429 0.647058824 63 1 0 101 X:8069133-8069209 7 60 6265 FBgn0004657 3546.84 102.2566667 157.0266667 0.016916466 0.58675881 0.382100705 -7 -7 -7 0.01 dme-miR-190-5p 6mer3-8 ACATAT X 8069320 8069325 + X_8069320_8069325_+ 1 1 1 0 mys FBtr0340135|FBtr0340137|FBtr0071105|FBtr0340136 8068934|8068934|8068934|8068934 8070237|8070237|8070237|8070237 X + 8069250 8069354 3'utr mys FlyBase G59707.1 AAGAAACCCCGCCATGGGGCAGCCTTTATACATTGCGTATACTTAACGAGCAAACGATTTGTGCCTTGCGACATATTTTAGACTAAATCTATACGTATGTATATG 55 8069327 0.979676851 11 53 390 0.971428571 1.832508913 0.085714286 0.163636364 0.342857143 55 2 0 68 X:8069250-8069354 6 mys FBtr0071105|FBtr0340136|FBtr0340135|FBtr0340137 8068934|8068934|8068934|8068934 8070237|8070237|8070237|8070237 ACATAT 6mer3-8 dme-miR-190-5p X + 8069263 8069341 3'utr mys FlyBase G45140.1 ATGGGGCAGCCTTTATACATTGCGTATACTTAACGAGCAAACGATTTGTGCCTTGCGACATATTTTAGACTAAATCTAT 25 8069327 0.979891593 10 25 173 1 1.531478917 0.058823529 0.28 0.470588235 25 0 0 34 X:8069263-8069341 6 33.5 6266 FBgn0004657 3546.84 102.2566667 157.0266667 0.009445027 0.327607002 0.21333956 -7 -7 -7 0.01 dme-miR-33-5p 6mer3-8 CAATGC X 8069721 8069726 + X_8069721_8069726_+ 1 1 1 0 mys FBtr0340135|FBtr0340137|FBtr0071105|FBtr0340136 8068934|8068934|8068934|8068934 8070237|8070237|8070237|8070237 X + 8069684 8069743 3'utr mys FlyBase G59710.1 AACTAATCTGCTACCCTCCCAAAACGGTCGTCCTTCGCAATGCCAAACCCCCCAACGTCT 45 8069717 0.939313451 6 45 200 1 1.69019608 0.306122449 0.088888889 0.163265306 45 0 0 49 X:8069684-8069743 6 mys FBtr0071105|FBtr0340136|FBtr0340135|FBtr0340137 8068934|8068934|8068934|8068934 8070237|8070237|8070237|8070237 CAATGC 6mer3-8 dme-miR-33-5p X + 8069682 8069752 3'utr mys FlyBase G45141.1 TTAACTAATCTGCTACCCTCCCAAAACGGTCGTCCTTCGCAATGCCAAACCCCCCAACGTCTTAATGTTTT 24 8069717 0.748701495 8 21 125 0.810810811 1.477121255 0.351351351 0.416666667 0.621621622 24 7 0 30 X:8069682-8069752 6 17 6267 FBgn0004657 3546.84 102.2566667 157.0266667 0.004792999 0.166248329 0.108261866 4 4 4 0.01 dme-miR-317-3p 6mer3-8 TGTGTT X 8069949 8069954 + X_8069949_8069954_+ 1 1 1 0 mys FBtr0340135|FBtr0340137|FBtr0071105|FBtr0340136 8068934|8068934|8068934|8068934 8070237|8070237|8070237|8070237 X + 8069913 8069961 3'utr mys FlyBase G59711.1 GAAAGCGTGGCAACAGGGGAAATTGTCCCTTGTGTGTGTGTTTTATTTA 10 8069935 0.989252709 6 9 83 1 1.041392685 0.181818182 0.1 0.181818182 10 0 0 11 X:8069913-8069961 6 mys FBtr0071105|FBtr0340136|FBtr0340135|FBtr0340137 8068934|8068934|8068934|8068934 8070237|8070237|8070237|8070237 TGTGTT 6mer3-8 dme-miR-317-3p X + 8069900 8069983 3'utr mys FlyBase G45142.1 ATTTATGGAAAACGAAAGCGTGGCAACAGGGGAAATTGTCCCTTGTGTGTGTGTTTTATTTAACTGAATTTCGATCATTAATAG 8 8069935 0.985235672 7 8 61 1 1.176091259 0.6 0.625 0.8 8 0 0 15 X:8069900-8069983 6 5.5 6268 FBgn0004657 3546.84 102.2566667 157.0266667 0.001550676 0.053786224 0.035025898 14 14 14 0.01 dme-miR-263a-5p 7mer-m1 TGCCATT X 8070017 8070023 + X_8070017_8070023_+ 0.765586663 0.765586663 0.765586663 0 mys FBtr0340135|FBtr0340137|FBtr0071105|FBtr0340136 8068934|8068934|8068934|8068934 8070237|8070237|8070237|8070237 X + 8070007 8070052 3'utr mys FlyBase G59712.1 ATATATTTTTTGCCATTTGTACTGATTACTGATTAACATTTAAAGT 67 8070023 0.642860456 12 64 695 0.949367089 1.574031268 0.050632911 0.149253731 0.278481013 67 3 1 75 X:8070007-8070052 7 mys FBtr0071105|FBtr0340136|FBtr0340135|FBtr0340137 8068934|8068934|8068934|8068934 8070237|8070237|8070237|8070237 TGCCATT 7mer-m1 dme-miR-263a-5p X + 8070003 8070047 3'utr mys FlyBase G45143.1 AAATATATATTTTTTGCCATTTGTACTGATTACTGATTAACATTT 41 8070023 0.729219999 10 36 433 0.859375 1.439332694 0.046875 0.390243902 0.609375 41 8 1 55 X:8070003-8070047 7 48 6269 FBgn0004657 3546.84 102.2566667 157.0266667 0.013533173 0.469407048 0.305680564 -6 -6 -6 0.01 dme-miR-252-5p 6mer3-8 GTACTT X 8070346 8070351 - X_8070346_8070351_- 1 1 1 0 Upf2 FBtr0071117 8070242 8071284 X - 8070325 8070365 3'utr Upf2 FlyBase G65602.1 TGCATTGATGCTAGGTACTTTATCTCATGTTGTATAAGAAA 13 8070338 0.628639137 4 12 138 0.923076923 1.079181246 0.153846154 0 0 13 1 0 12 X:8070325-8070365 6 Upf2 FBtr0071117 8070242 8071284 GTACTT 6mer3-8 dme-miR-252-5p X - 8070326 8070364 3'utr Upf2 FlyBase G49403.1 GCATTGATGCTAGGTACTTTATCTCATGTTGTATAAGAA 6 8070338 0.640406874 3 6 60 1 1.041392685 0.363636364 0.666666667 0.818181818 6 0 0 11 X:8070326-8070364 6 9.5 6270 FBgn0029992 611.4266667 14.48666667 22.18333333 0.015537432 0.655775426 0.428249437 -13 -13 -13 0.01 dme-miR-308-3p 7mer-m1 TGTGATT X 8087854 8087860 - X_8087854_8087860_- 0.443131017 0.443131017 0.443131017 0 UbcE2H FBtr0071112 8087542 8089308 X - 8087831 8087870 3'utr UbcE2H FlyBase G65623.1 TTGATGAGGATGTGATTTTTAGAAGGCGGGTTCTTAAGTG 12 8087853 0.612532161 5 10 110 0.833333333 1 0.416666667 0 0 12 2 0 10 X:8087831-8087870 7 UbcE2H FBtr0071112 8087542 8089308 TGTGATT 7mer-m1 dme-miR-308-3p X - 8087831 8087871 3'utr UbcE2H FlyBase G49414.1 TTTGATGAGGATGTGATTTTTAGAAGGCGGGTTCTTAAGTG 9 8087853 0.637204959 4 9 80 1 1.146128036 0.285714286 0.444444444 0.642857143 9 0 0 14 X:8087831-8087871 7 10.5 6271 FBgn0029996 2080.593333 98.34666667 150.9166667 0.005046637 0.106765184 0.069574821 -7 -7 -7 0.01 dme-bantam-3p 6mer3-8 TGATCT X 8088674 8088679 - X_8088674_8088679_- 1 1 1 0 UbcE2H FBtr0071113|FBtr0071114|FBtr0071112 8088007|8088007|8087542 8089308|8089308|8089308 X - 8088618 8088724 5'utr UbcE2H FlyBase G65627.1 AAGTGCACATGCAATGCGAAATTTGACGAGAAATTGCTTTGGCCTTGATCTGGCATTAAACAGACTTCGATGCTCGTCGTTCTTTAGAGTTTAACAAGTTGATAGAA 15 8088679 0.98405202 10 15 117 1 1.176091259 0.266666667 0 0 15 0 0 15 X:8088618-8088724 6 UbcE2H FBtr0071114|FBtr0071112|FBtr0071113 8088007|8087542|8088007 8089308|8089308|8089308 TGATCT 6mer3-8 dme-bantam-3p X - 8088667 8088701 5'utr UbcE2H FlyBase G49418.1 TGACGAGAAATTGCTTTGGCCTTGATCTGGCATTA 6 8088686 0.886913661 2 6 47 1 1 0.2 0.333333333 0.6 6 0 0 10 X:8088667-8088701 6 7.5 6272 FBgn0029996 2080.593333 98.34666667 150.9166667 0.003604741 0.076260846 0.0496963 0 7 3.5 0.01 dme-miR-184-5p 6mer3-8 TGATAA X 8088923 8088928 - X_8088923_8088928_- 0.999999065 1 0.999999532 6.36E-07 UbcE2H FBtr0071113|FBtr0071114|FBtr0071112 8088007|8088007|8087542 8089308|8089308|8089308 X - 8088898 8088989 5'utr UbcE2H FlyBase G65631.1 ACACTAATGTAAGCAGAAAGAAAAACAAGATTTAAAAACTCTTAGTTTAGCCATCAGTAGCTGATAACAAAACGGATTGGAGCAACGATCGC 18 8088913 0.96303006 12 17 82 0.958333333 1.06069784 0.125 0.222222222 0.416666667 18 0 1 23 X:8088898-8088989 6 UbcE2H FBtr0071114|FBtr0071112|FBtr0071113 8088007|8087542|8088007 8089308|8089308|8089308 TGATAA 6mer3-8 dme-miR-184-5p X - 8088867 8088942 5'utr UbcE2H FlyBase G49420.1 TAGCCATCAGTAGCTGATAACAAAACGGATTGGAGCAACGATCGCAACAGATCATAGCAGATATATAGACCACAGT 15 8088913 0.948270407 7 11 51 0.95 1.278753601 0 0.333333333 0.5 15 1 0 19 X:8088867-8088942 6 7.5 6273 FBgn0029996 2080.593333 98.34666667 150.9166667 0.003604741 0.076260846 0.0496963 -15 -15 -15 0.01 dme-miR-986-5p 6mer3-8 ATTCGA X 8089060 8089065 - X_8089060_8089065_- 1 1 1 0 UbcE2H FBtr0071113|FBtr0071114|FBtr0071112 8088007|8088007|8087542 8089308|8089308|8089308 X - 8089034 8089105 5'utr UbcE2H FlyBase G65632.1 ATAATTGATAAATGATAATTGGATTTTAAGATAGAAAGTGATTCGATGATGGCGTGTGATGATCAGCGCACA 28 8089063 0.795574029 9 27 191 0.96875 1.491361694 0.25 0.142857143 0.25 28 1 0 31 X:8089034-8089105 6 UbcE2H FBtr0071114|FBtr0071112|FBtr0071113 8088007|8087542|8088007 8089308|8089308|8089308 ATTCGA 6mer3-8 dme-miR-986-5p X - 8089036 8089105 5'utr UbcE2H FlyBase G49421.1 ATAATTGATAAATGATAATTGGATTTTAAGATAGAAAGTGATTCGATGATGGCGTGTGATGATCAGCGCA 26 8089063 0.952230889 8 26 174 1 1.612783857 0.170731707 0.384615385 0.609756098 26 0 0 41 X:8089036-8089105 6 24 6274 FBgn0029996 2080.593333 98.34666667 150.9166667 0.011535171 0.244034707 0.159028161 -2 -2 -2 0.01 dme-miR-986-5p 7mer-A1 TTCGAGA X 8089233 8089239 - X_8089233_8089239_- 0.823349562 0.823349562 0.823349562 0 UbcE2H FBtr0071113|FBtr0071114|FBtr0071112 8088007|8088007|8087542 8089308|8089308|8089308 X - 8089207 8089306 5'utr UbcE2H FlyBase G65634.1 TCGGTTGGACCGCCAGCCTACGGAACTACCGCTAACACTAACACTGACAACAGCCTAATACAAATGCTTCGAGAATCCATTTTCCTGCCACCCAATTTCC 49 8089225 0.88672113 10 47 252 0.968253968 1.785329835 0.555555556 0.224489796 0.396825397 49 2 0 61 X:8089207-8089306 7 UbcE2H FBtr0071114|FBtr0071112|FBtr0071113 8088007|8087542|8088007 8089308|8089308|8089308 TTCGAGA 7mer-A1 dme-miR-986-5p X - 8089209 8089306 5'utr UbcE2H FlyBase G49422.1 TCGGTTGGACCGCCAGCCTACGGAACTACCGCTAACACTAACACTGACAACAGCCTAATACAAATGCTTCGAGAATCCATTTTCCTGCCACCCAATTT 28 8089225 0.99971556 7 26 134 0.888888889 1.301029996 0.533333333 0.428571429 0.644444444 28 4 1 40 X:8089209-8089306 7 30 6275 FBgn0029996 2080.593333 98.34666667 150.9166667 0.014418964 0.305043384 0.198785202 -14 -14 -14 0.01 dme-miR-308-3p 7mer-m1 TGTGATT X 8102652 8102658 - X_8102652_8102658_- 0.443131018 0.443131018 0.443131018 0 Gclc FBtr0071107|FBtr0340138|FBtr0071108|FBtr0340139 8102580|8102179|8102580|8102580 8103531|8103531|8103531|8103531 X - 8102605 8102727 3'utr Gclc FlyBase G65648.1 TTAAACTAGATATGATAAGTACACATATAACGAAAAAAACAACACTGTGCTATTATAATTTATTGTGTATGTGATTGTTTCCCCATTATGATACGATTATGATTTATTGTGACCACAAGCAAG 15 8102652 0.982445059 7 14 113 1 1.204119983 0.0625 0.066666667 0.125 15 0 0 16 X:8102605-8102727 7 Gclc FBtr0071107|FBtr0340138|FBtr0071108|FBtr0340139 8102580|8102179|8102580|8102580 8103531|8103531|8103531|8103531 TGTGATT 7mer-m1 dme-miR-308-3p X - 8102642 8102696 3'utr Gclc FlyBase G49432.1 GAAAAAAACAACACTGTGCTATTATAATTTATTGTGTATGTGATTGTTTCCCCAT 10 8102651 0.983932366 5 10 82 1 1.079181246 0.333333333 0.2 0.333333333 10 0 0 12 X:8102642-8102696 7 6 6276 FBgn0040319 793.1366667 24.97666667 38.58666667 0.007564901 0.240224209 0.155494126 -6 -7 -6.5 0.01 dme-miR-190-5p 6mer3-8 ACATAT X 8102923 8102928 - X_8102923_8102928_- 1 1 1 0 Gclc FBtr0071107|FBtr0340138|FBtr0071108|FBtr0340139 8102580|8102179|8102580|8102580 8103531|8103531|8103531|8103531 X - 8102880 8102972 3'utr Gclc FlyBase G65650.1 ATCTCAACTAAGTGCCGTTCCACGAGACCTACAAAAATATGAATACATATAGTTCAAAACGAGGCAAGGTTAAAAGTGTATTTCTGTTTGTTT 25 8102923 0.960622226 7 25 126 1 1.447158031 0.178571429 0.12 0.214285714 25 0 0 28 X:8102880-8102972 6 Gclc FBtr0071107|FBtr0340138|FBtr0071108|FBtr0340139 8102580|8102179|8102580|8102580 8103531|8103531|8103531|8103531 ACATAT 6mer3-8 dme-miR-190-5p X - 8102895 8102934 3'utr Gclc FlyBase G49433.1 ATGAATACATATAGTTCAAAACGAGGCAAGGTTAAAAGTG 13 8102923 0.768485222 3 13 54 1 1.361727836 0.217391304 0.538461538 0.739130435 13 0 0 23 X:8102895-8102934 6 13 6277 FBgn0040319 793.1366667 24.97666667 38.58666667 0.016390618 0.520485787 0.336903939 -5 -5 -5 0.01 dme-miR-995-5p 7mer-m1 ATTCGGG X 8103466 8103472 - X_8103466_8103472_- 0.825582373 0.825582373 0.825582373 0 Gclc FBtr0071107|FBtr0340138|FBtr0071108|FBtr0340139 8102580|8102179|8102580|8102580 8103531|8103531|8103531|8103531 X - 8103449 8103534 stop_codon Gclc FlyBase G65652.1 TGATCGAGGAGCGCGCTGCGGACGCGTTCAGCGCAGCTGGCCGCCGGTGGCCGGCGCATGTGATTCGGGTTTTGTGGGTCCGTTCG 37 8103470 0.973353604 9 37 223 1 1.579783597 0.605263158 0.027027027 0.052631579 37 0 0 38 X:8103449-8103534 7 Gclc FBtr0071107|FBtr0340138|FBtr0071108|FBtr0340139 8102580|8102179|8102580|8102580 8103531|8103531|8103531|8103531 ATTCGGG 7mer-m1 dme-miR-995-5p X - 8103452 8103515 3'utr Gclc FlyBase G49434.1 GGACGCGTTCAGCGCAGCTGGCCGCCGGTGGCCGGCGCATGTGATTCGGGTTTTGTGGGTCCGT 20 8103470 0.978080341 5 20 137 1 1.431363764 0.518518519 0.3 0.481481481 20 0 0 27 X:8103452-8103515 7 25 6278 FBgn0040319 793.1366667 24.97666667 38.58666667 0.031520419 1.000934205 0.647892191 -2 -2 -2 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 8138308 8138313 - X_8138308_8138313_- 1 1 1 0 Smox FBtr0340159 8137039 8139221 X - 8138242 8138313 3'utr Smox FlyBase G65668.1 ACCAAAAGATACCCCGAATCTGTGTGCGTAAAGTTGGTAGCGCTAGAAGCGAGAGAGTCAAAATTCTTTGAG 8 8138304 0.951702456 5 8 37 1 1 0.1 0.25 0.4 8 0 0 10 X:8138242-8138313 6 Smox FBtr0340159 8137039 8139221 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X - 8138283 8138312 3'utr Smox FlyBase G49440.1 CCAAAAGATACCCCGAATCTGTGTGCGTAA 5 8138304 0.910322568 2 5 16 1 0.698970004 0.2 0 0 5 0 0 5 X:8138283-8138312 5 4 6279 FBgn0025800 1459.686667 39.15666667 60.23333333 0.002740314 0.102153741 0.066408412 -9 -9 -9 0.01 dme-miR-277-3p 7mer-m8 TGCATTT X 8143958 8143964 - X_8143958_8143964_- 0.620204266 0.620204266 0.620204266 0 CG2263 FBtr0071190 8143902 8143998 X - 8143932 8143982 3'utr CG2263 FlyBase G65687.1 TAGGACCTGCGATCAAATTGCATTTTTTTTCACACATGAATGTTCCAAAAC 15 8143965 0.847275386 3 14 140 0.933333333 1.146128036 0.533333333 0 0 15 1 0 14 X:8143932-8143982 7 CG2263 FBtr0071190 8143902 8143998 TGCATTT 7mer-m8 dme-miR-277-3p X - 8143932 8143981 3'utr CG2263 FlyBase G49455.1 AGGACCTGCGATCAAATTGCATTTTTTTTCACACATGAATGTTCCAAAAC 5 8143965 0.984478007 3 5 39 1 0.84509804 0 0.4 0.571428571 5 0 0 7 X:8143932-8143981 7 8.5 6280 FBgn0030007 507.0733333 36.52333333 55.98333333 0.016762861 0.232727936 0.151830902 1 1 1 0.01 dme-miR-317-5p 7mer-A1 TATCCCA X 8154769 8154775 - X_8154769_8154775_- 0.823349562 0.823349562 0.823349562 0 Traf6 FBtr0071188 8154597 8155833 X - 8154768 8154810 3'utr Traf6 FlyBase G65696.1 AAAAAAAAAAACAACAAAGGCTGTATGTATTATTTTATCCCAA 13 8154785 0.940923541 4 13 52 1 1.361727836 0 0.538461538 0.739130435 13 0 0 23 X:8154768-8154810 7 Traf6 FBtr0071188 8154597 8155833 TATCCCA 7mer-A1 dme-miR-317-5p X - 8154771 8154807 3'utr Traf6 FlyBase G49465.1 AAAAAAAACAACAAAGGCTGTATGTATTATTTTATCC 10 8154784 0.951170018 4 10 49 1 1.041392685 0 0.1 0.181818182 10 0 0 11 X:8154771-8154807 4 1.5 6281 FBgn0265464 124.9866667 5.45 8.333333333 0.01200128 0.275229358 0.18 10 9 9.5 0.01 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 8154902 8154907 - X_8154902_8154907_- 1 1 1 0 Traf6 FBtr0071188 8154597 8155833 X - 8154889 8154953 3'utr Traf6 FlyBase G65698.1 AAAACTAGTAATGAGTGAACCGACCAGCGCATAGAATATAAAATATGTACCTTTTTTGAAAACAA 23 8154900 0.849004415 8 22 190 0.961538462 1.096910013 0.038461538 0.086956522 0.192307692 23 0 1 25 X:8154889-8154953 6 Traf6 FBtr0071188 8154597 8155833 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X - 8154893 8154952 3'utr Traf6 FlyBase G49467.1 AAACTAGTAATGAGTGAACCGACCAGCGCATAGAATATAAAATATGTACCTTTTTTGAAA 25 8154908 0.89132802 5 24 199 0.96969697 1.505149978 0.212121212 0.2 0.393939394 25 1 0 32 X:8154893-8154952 6 18.5 6282 FBgn0265464 124.9866667 5.45 8.333333333 0.148015788 3.394495413 2.22 -7 1 -3 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA X 8155326 8155331 - X_8155326_8155331_- 1 0.999999999 0.999999999 0 Traf6 FBtr0071188 8154597 8155833 X - 8155267 8155348 3'utr Traf6 FlyBase G65700.1 ATCACATTAAGCAATCTTGATGATATTCAAATACTAATCGATATTAGCCTAGTATCCTAGAACTATCTCTTATTCTCTATTT 19 8155332 0.735306946 9 18 135 0.96 1.380211242 0 0.263157895 0.44 19 1 0 24 X:8155267-8155348 6 Traf6 FBtr0071188 8154597 8155833 TGATGA 6mer3-8 dme-miR-2a-2-5p X - 8155264 8155350 3'utr Traf6 FlyBase G49469.1 GCATCACATTAAGCAATCTTGATGATATTCAAATACTAATCGATATTAGCCTAGTATCCTAGAACTATCTCTTATTCTCTATTTGTA 13 8155330 0.973907883 7 13 106 1 1.230448921 0.176470588 0.307692308 0.470588235 13 0 0 17 X:8155264-8155350 6 9.5 6283 FBgn0265464 124.9866667 5.45 8.333333333 0.076008108 1.743119266 1.14 1 -1 0 0.01 dme-miR-1003-3p 7mer-A1 TGTGAGA X 8158724 8158730 + X_8158724_8158730_+ 0.823349562 0.823349562 0.823349562 0 GIIIspla2 FBtr0303457|FBtr0345987 8158376|8158376 8159017|8159348 X + 8158708 8158750 3'utr GIIIspla2 FlyBase G59745.1 ACTTAGATGAACAGATTGTGAGAGGAGGAGGAGGAGAGACAGC 22 8158723 0.925315658 3 19 65 0.75862069 1.041392685 0.551724138 0.181818182 0.379310345 22 6 1 22 X:8158708-8158750 7 GIIIspla2 FBtr0345987|FBtr0303457 8158376|8158376 8159348|8159017 TGTGAGA 7mer-A1 dme-miR-1003-3p X + 8158690 8158750 3'utr GIIIspla2 FlyBase G45170.1 AACACCATCATCATCCGTACTTAGATGAACAGATTGTGAGAGGAGGAGGAGGAGAGACAGC 16 8158723 0.903345565 4 14 45 0.935483871 1.462397998 0.451612903 0.6875 0.838709677 16 2 0 29 X:8158690-8158750 7 18 6284 FBgn0030013 187 19.04 29.33333333 0.096256684 0.945378151 0.613636364 1 1 1 0.01 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT X 8158871 8158876 + X_8158871_8158876_+ 1 1 1 0 GIIIspla2 FBtr0303457|FBtr0345987 8158376|8158376 8159017|8159348 X + 8158761 8158912 3'utr GIIIspla2 FlyBase G59746.1 ACGTCTATGTATTAGGCTAAATTACCAACATATTTATATGACTGTCAAGTGCTATTATAATGCGTAGTAGTCGATACGATGTACTAACACACCTAGTTGTAGTCACTCAATCTAGTTTAGGCCAACGAATCGATAACAGGCTGCCAGAAAAC 41 8158894 0.840220545 15 37 242 0.895833333 1.633468456 0.104166667 0.146341463 0.270833333 41 5 0 43 X:8158761-8158912 6 GIIIspla2 FBtr0345987|FBtr0303457 8158376|8158376 8159348|8159017 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" X + 8158821 8158910 3'utr GIIIspla2 FlyBase G45172.1 TGCGTAGTAGTCGATACGATGTACTAACACACCTAGTTGTAGTCACTCAATCTAGTTTAGGCCAACGAATCGATAACAGGCTGCCAGAAA 13 8158878 0.964911276 7 10 53 0.944444444 1.230448921 0 0.307692308 0.5 13 1 0 17 X:8158821-8158910 6 5.5 6285 FBgn0030013 187 19.04 29.33333333 0.029411765 0.288865546 0.1875 -23 -7 -15 0.01 dme-miR-276a-3p 7mer-A1 GTTCCTA X 8171293 8171299 - X_8171293_8171299_- 0.678395528 0.823346975 0.750871252 0.102496189 slpr FBtr0303842|FBtr0303843|FBtr0303844|FBtr0071184 8170677|8170227|8170677|8170677 8171581|8171581|8171581|8171581 X - 8171285 8171315 3'utr slpr FlyBase G65706.1 TCATAATAACCGAATTGTTCCTAACGAATGC 12 8171300 0.694288973 3 11 65 0.933333333 1.146128036 0 0.166666667 0.333333333 12 1 0 14 X:8171285-8171315 7 slpr FBtr0303842|FBtr0303843|FBtr0303844|FBtr0071184 8170677|8170227|8170677|8170677 8171581|8171581|8171581|8171581 GTTCCTA 7mer-A1 dme-miR-276a-3p X - 8171274 8171313 3'utr slpr FlyBase G49473.1 ATAATAACCGAATTGTTCCTAACGAATGCAATATGTTGTG 10 8171300 0.963992488 4 10 53 1 1.204119983 0 0.4 0.625 10 0 0 16 X:8171274-8171313 7 11 6286 FBgn0030018 811.23 18.14 27.89 0.013559656 0.606394708 0.394406597 1 1 1 0.01 dme-miR-980-3p 7mer-m8 GGCAGCT X 8239111 8239117 + X_8239111_8239117_+ 0.658999527 0.658999527 0.658999527 0 sdt FBtr0100376|FBtr0089975|FBtr0089978|FBtr0340141|FBtr0333720|FBtr0333721|FBtr0308218|FBtr0308219|FBtr0340142|FBtr0308217|FBtr0111034|FBtr0100375|FBtr0308220|FBtr0089974 8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445 8239427|8239427|8240474|8239427|8240474|8239427|8239427|8239427|8240474|8239427|8239427|8239427|8239427|8240474 X + 8239073 8239130 3'utr sdt FlyBase G59752.1 AGCGACTCCGAATGTTAACAGAGCCAGAACAATCCGTAGGCAGCTGTGCGAGGGGAGA 11 8239109 0.899253583 2 11 33 1 1.041392685 0.636363636 0 0 11 0 0 11 X:8239073-8239130 7 sdt FBtr0308220|FBtr0089974|FBtr0111034|FBtr0100375|FBtr0308219|FBtr0089975|FBtr0308217|FBtr0333720|FBtr0100376|FBtr0089978|FBtr0308218|FBtr0340141|FBtr0333721|FBtr0340142 8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445 8239427|8240474|8239427|8239427|8239427|8239427|8239427|8240474|8239427|8240474|8239427|8239427|8239427|8240474 GGCAGCT 7mer-m8 dme-miR-980-3p X + 8239092 8239144 3'utr sdt FlyBase G45177.1 AGAGCCAGAACAATCCGTAGGCAGCTGTGCGAGGGGAGATCGATCCGTCGGAT 7 8239109 0.923354171 3 7 24 1 1.113943352 0.615384615 0.714285714 0.846153846 7 0 0 13 X:8239092-8239144 7 8 6287 FBgn0261873 288.2033333 5.556666667 8.47 0.02775818 1.439712058 0.944510035 2 2 2 0.01 dme-miR-307a-3p 6mer3-8 GGTTGT X 8247766 8247771 + X_8247766_8247771_+ 1 1 1 0 Trxr-1 FBtr0071169|FBtr0071168|FBtr0071167 8247693|8247693|8247693 8248033|8248033|8248033 X + 8247716 8247834 3'utr Trxr-1 FlyBase G59769.1 CCTGGGACGTGTCGAAGCCGCTTGCTCCACCCGAAATCCCGTAGATGAATGGTTGTTGTCGCGGCCCAGCGATCGATGAGTTCAATAGTTCCGTTTCGTTTCCACAATTAACACCCAAC 17 8247765 0.980764245 7 17 120 1 1.301029996 0.4 0.117647059 0.25 17 0 0 20 X:8247716-8247834 6 Trxr-1 FBtr0071168|FBtr0071167|FBtr0071169 8247693|8247693|8247693 8248033|8248033|8248033 GGTTGT 6mer3-8 dme-miR-307a-3p X + 8247725 8247785 3'utr Trxr-1 FlyBase G45191.1 TGTCGAAGCCGCTTGCTCCACCCGAAATCCCGTAGATGAATGGTTGTTGTCGCGGCCCAGC 6 8247765 0.975074542 2 6 35 1 0.903089987 0.25 0.333333333 0.5 6 0 0 8 X:8247725-8247785 6 6.5 6288 FBgn0020653 1519.943333 86.74333333 132.1866667 0.004276475 0.074933712 0.049172887 1 1 1 0.01 dme-miR-988-3p 7mer-A1 CAAGGGA X 8247849 8247855 + X_8247849_8247855_+ 0.782911824 0.782911824 0.782911824 0 Trxr-1 FBtr0071169|FBtr0071168|FBtr0071167 8247693|8247693|8247693 8248033|8248033|8248033 X + 8247837 8247868 3'utr Trxr-1 FlyBase G59770.1 AATAGCTCTGCGCAAGGGAGGGGCACTGGGCA 7 8247844 0.562309598 2 7 9 1 0.84509804 0 0 0 7 0 0 7 X:8247837-8247868 7 Trxr-1 FBtr0071168|FBtr0071167|FBtr0071169 8247693|8247693|8247693 8248033|8248033|8248033 CAAGGGA 7mer-A1 dme-miR-988-3p X + 8247840 8247861 3'utr Trxr-1 FlyBase G45192.1 AGCTCTGCGCAAGGGAGGGGCA 5 8247843 0.636742044 2 5 5 1 1.041392685 0 0.6 0.818181818 5 0 0 11 X:8247840-8247861 7 6 6289 FBgn0020653 1519.943333 86.74333333 132.1866667 0.003947516 0.069169581 0.045390357 5 6 5.5 0.01 dme-miR-282-5p 6mer2-7 GAGGCT X 8275823 8275828 + X_8275823_8275828_+ 1 1 1 0 CG1636 FBtr0339833|FBtr0071171 8275361|8275361 8276450|8276201 X + 8275771 8275856 3'utr CG1636 FlyBase G59775.1 AAATCAAACGTGCAGATAATCTCAAAGGCTATATACGCAAAAATCGAAAAGTGAGGCTTACAAAATTAATCTCCTAGAAGTATTTA 63 8275822 0.933545604 7 60 289 0.957746479 1.531478917 0.056338028 0.095238095 0.197183099 63 2 1 68 X:8275771-8275856 6 CG1636 FBtr0339833|FBtr0071171 8275361|8275361 8276450|8276201 GAGGCT 6mer2-7 dme-miR-282-5p X + 8275775 8275855 3'utr CG1636 FlyBase G45196.1 CAAACGTGCAGATAATCTCAAAGGCTATATACGCAAAAATCGAAAAGTGAGGCTTACAAAATTAATCTCCTAGAAGTATTT 45 8275822 0.948411095 5 45 180 1 1.819543936 0.090909091 0.422222222 0.606060606 45 0 0 66 X:8275775-8275855 6 41 6290 FBgn0030030 151.2133333 8.68 13.2 0.271140111 4.723502304 3.106060606 1 1 1 0.01 dme-miR-2b-2-5p 6mer2-7 TGAAGA X 8402963 8402968 + X_8402963_8402968_+ 1 1 1 0 CG10555 FBtr0071174|FBtr0343353 8402563|8402563 8403942|8404516 X + 8402905 8402989 3'utr CG10555 FlyBase G59783.1 GAAGACGGACGAGTAAGCATAAGACTTAAAGTAGGCGAAAAGAACGACGAATGAGAAATGAAGACGAGATGGAAATTCAGGATTC 355 8402963 0.971952485 5 351 794 0.988179669 2.320146286 0.444444444 0.154929577 0.290780142 355 4 1 418 X:8402905-8402989 6 CG10555 FBtr0343353|FBtr0071174 8402563|8402563 8404516|8403942 TGAAGA 6mer2-7 dme-miR-2b-2-5p X + 8402910 8402986 3'utr CG10555 FlyBase G45199.1 CGGACGAGTAAGCATAAGACTTAAAGTAGGCGAAAAGAACGACGAATGAGAAATGAAGACGAGATGGAAATTCAGGA 173 8402963 0.979528508 6 171 361 0.992217899 2.105510185 0.459143969 0.358381503 0.568093385 173 1 1 255 X:8402910-8402986 6 254.5 6291 FBgn0030034 842.1066667 21.32333333 32.79333333 0.302218246 11.93528216 7.760723724 0 0 0 0.01 dme-miR-995-5p 7mer-m8 AATTCGG X 8403060 8403066 + X_8403060_8403066_+ 0.671796458 0.671796458 0.671796458 0 CG10555 FBtr0071174|FBtr0343353 8402563|8402563 8403942|8404516 X + 8402999 8403093 3'utr CG10555 FlyBase G59784.1 AGCAGCGAATTCCTCGAATTTCGAACTGAACTGTACGAAAGTTGCAGGCAGTTTTTTTTTAAATTCGGTGATAAATAGCAGAAGCAAGTAGCAGG 34 8403062 0.819490487 10 32 242 0.975 1.591064607 0.4 0.117647059 0.25 34 1 0 39 X:8402999-8403093 7 CG10555 FBtr0343353|FBtr0071174 8402563|8402563 8404516|8403942 AATTCGG 7mer-m8 dme-miR-995-5p X + 8403053 8403083 3'utr CG10555 FlyBase G45200.1 TTTTTTAAATTCGGTGATAAATAGCAGAAGC 11 8403062 0.767484927 2 10 71 0.933333333 1.146128036 0.533333333 0.363636364 0.533333333 11 1 0 14 X:8403053-8403083 7 17 6292 FBgn0030034 842.1066667 21.32333333 32.79333333 0.020187466 0.79724871 0.518398048 -2 -2 -2 0.01 dme-miR-980-5p 7mer-A1 AAAAACA X 8404841 8404847 - X_8404841_8404847_- 0.775443143 0.782911819 0.779177481 0.005281168 CG11190 FBtr0071175 8404533 8404859 X - 8404809 8404845 3'utr CG11190 FlyBase G65732.2 AAACAGCCATCGGGAGTCGTGATAAGCTCCCACTGAT 40 8404836 0.981429944 5 39 167 0.976744186 1.322219295 0.11627907 0.075 0.139534884 40 0 1 42 X:8404809-8404845 5 CG11190 FBtr0071175 8404533 8404859 AAAAACA 7mer-A1 dme-miR-980-5p X - 8404793 8404844 3'utr CG11190 FlyBase G49494.1 AACAGCCATCGGGAGTCGTGATAAGCTCCCACTGATAGTATACCCTTACAAT 16 8404836 0.99959951 4 16 70 1 1.361727836 0 0.375 0.565217391 16 0 0 23 X:8404793-8404844 4 14.5 6293 FBgn0030035 754.1133333 36.20333333 55.29666667 0.019227879 0.400515606 0.262221954 -11 -11 -11 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA X 8408196 8408201 - X_8408196_8408201_- 1 1 1 0 lawc FBtr0071248|FBtr0071248|FBtr0302081|FBtr0302081|FBtr0307287|FBtr0307287|FBtr0307286|FBtr0307286 8408006|8408006|8408006|8408006|8408006|8408006|8408006|8408006 8409752|8409752|8409752|8409752|8409752|8409752|8409752|8409752 X - 8408069 8408308 3'utr lawc FlyBase G65739.1 AATAATTTCAAGGAGAAGATGTTTTTGTGGTCAAAAACGTGCAGATGACTTCTAAGAAGTTGGAAAATCATGTATTTACTCGGAAAGAAGCCAGAACTGAAGTAGCATACTTATTAGTATTATCAAATGATGAGTTTTTTCATCATAGTTTTAGTTCTATATTTATAGAAAAAAAAAACTTTCCTTGTTACTTTTAGTTTTTTCATTTGAAAGACTGCCGTTGACTTTTTCATTTTATTC 59 8408206 0.982688276 23 56 436 0.938461538 1.785329835 0.092307692 0.101694915 0.184615385 59 4 0 61 X:8408069-8408308 6 lawc FBtr0071248|FBtr0071248|FBtr0302081|FBtr0302081|FBtr0307287|FBtr0307287|FBtr0307286|FBtr0307286 8408006|8408006|8408006|8408006|8408006|8408006|8408006|8408006 8409752|8409752|8409752|8409752|8409752|8409752|8409752|8409752 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" X - 8408176 8408255 3'utr lawc FlyBase G49500.1 AAGAAGTTGGAAAATCATGTATTTACTCGGAAAGAAGCCAGAACTGAAGTAGCATACTTATTAGTATTATCAAATGATGA 13 8408205 0.963328561 6 13 73 1 1.204119983 0.125 0.230769231 0.375 13 0 0 16 X:8408176-8408255 6 6 6294 FBgn0262976 211.98 11.61333333 17.8 0.028304557 0.516647532 0.337078652 5 4 4.5 0.01 dme-miR-1006-3p 6mer3-8 CGAATT X 8409733 8409738 - X_8409733_8409738_- 1 1 1 0 lawc FBtr0071248|FBtr0302081|FBtr0307287|FBtr0307286 8408006|8408006|8408006|8408006 8409752|8409752|8409752|8409752 X - 8409717 8409769 stop_codon lawc FlyBase G65741.1 GCTTAACGTTTCTATAGTGTGTTCCGTTCCGCGAATTCTCATGTGCATTTATG 27 8409748 0.986301696 3 22 209 0.852941176 1.462397998 0.117647059 0.222222222 0.382352941 27 5 0 29 X:8409717-8409769 6 lawc FBtr0071248|FBtr0302081|FBtr0307287|FBtr0307286 8408006|8408006|8408006|8408006 8409752|8409752|8409752|8409752 CGAATT 6mer3-8 dme-miR-1006-3p X - 8409725 8409762 stop_codon lawc FlyBase G49503.1 GTTTCTATAGTGTGTTCCGTTCCGCGAATTCTCATGTG 18 8409748 0.700258888 5 18 128 1 1.361727836 0.130434783 0.277777778 0.434782609 18 0 0 23 X:8409725-8409762 6 20 6295 FBgn0262976 211.98 11.61333333 17.8 0.094348523 1.722158439 1.123595506 10 10 10 0.01 dme-miR-263a-5p 6mer3-8 GTGCCA X 8429129 8429134 + X_8429129_8429134_+ 1 1 1 0 Trf2 FBtr0300577|FBtr0330106|FBtr0333811|FBtr0330105|FBtr0112927|FBtr0333750 8429114|8429114|8429114|8429114|8429114|8429114 8433011|8433011|8430195|8430195|8430195|8430195 X + 8429030 8429141 stop_codon Trf2 FlyBase G59811.1 AACAGACCAGCTTCTCGCCCAGCGAATTCGATGTTGATGACTTGATCGAGGAGGAGGAGAACAACGAATTGGATATGCCCTTCTAAGCTAGCGCTGCCCGTGCCAAAAAAAA 13 8429129 0.952630486 10 13 62 1 1.146128036 0.142857143 0.076923077 0.142857143 13 0 0 14 X:8429030-8429141 6 Trf2 FBtr0112927|FBtr0333750|FBtr0300577|FBtr0330106|FBtr0333811|FBtr0330105 8429114|8429114|8429114|8429114|8429114|8429114 8430195|8430195|8433011|8433011|8430195|8430195 GTGCCA 6mer3-8 dme-miR-263a-5p X + 8429097 8429144 stop_codon Trf2 FlyBase G45213.1 ATTGGATATGCCCTTCTAAGCTAGCGCTGCCCGTGCCAAAAAAAAATT 6 8429127 0.906291225 3 5 22 1 0.954242509 0 0.8 0.888888889 5 0 0 9 X:8429097-8429144 6 5.5 6296 FBgn0261793 2407.63 30.94 47.70333333 0.002284404 0.177763413 0.115295926 0 2 1 0.01 dme-miR-2b-2-5p 7mer-A1 TGAAGAA X 8429966 8429972 + X_8429966_8429972_+ 0.823349562 0.823349562 0.823349562 0 Trf2 FBtr0300577|FBtr0330106|FBtr0333811|FBtr0330105|FBtr0112927|FBtr0333750 8429114|8429114|8429114|8429114|8429114|8429114 8433011|8433011|8430195|8430195|8430195|8430195 X + 8429909 8429988 3'utr Trf2 FlyBase G59818.1 ATCCGTGGAGAGGAGGTGGGGCCAGAGAAAAGCCCACTAGGATAGTTATCAATTATCTGAAGAACAACTGATTAATTTCT 20 8429980 0.97368226 10 18 102 0.928571429 1.414973348 0.071428571 0.3 0.5 20 2 0 26 X:8429909-8429988 7 Trf2 FBtr0112927|FBtr0333750|FBtr0300577|FBtr0330106|FBtr0333811|FBtr0330105 8429114|8429114|8429114|8429114|8429114|8429114 8430195|8430195|8433011|8433011|8430195|8430195 TGAAGAA 7mer-A1 dme-miR-2b-2-5p X + 8429952 8429985 3'utr Trf2 FlyBase G45218.1 AGTTATCAATTATCTGAAGAACAACTGATTAATT 9 8429980 0.647813594 4 9 48 1 1.204119983 0 0.666666667 0.8125 9 0 0 16 X:8429952-8429985 7 11 6297 FBgn0261793 2407.63 30.94 47.70333333 0.004568808 0.355526826 0.230591852 -14 -14 -14 0.01 dme-miR-276a-3p 6mer2-7 GTTCCT X 8430443 8430448 + X_8430443_8430448_+ 1 1 1 0 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 X + 8430418 8430462 3'utr Trf2 FlyBase G59822.1 CGCTTAAGTGTAGATTTACAAACTTGTTCCTGTGTTGTTAAAATC 189 8430443 0.745467116 12 184 2059 0.976851852 1.625312451 0.162037037 0.121693122 0.231481481 189 1 4 211 X:8430418-8430462 6 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 GTTCCT 6mer2-7 dme-miR-276a-3p X + 8430419 8430466 3'utr Trf2 FlyBase G45223.1 GCTTAAGTGTAGATTTACAAACTTGTTCCTGTGTTGTTAAAATCAGAA 121 8430442 0.76049186 9 115 1286 0.947916667 1.561101384 0.135416667 0.41322314 0.630208333 121 6 4 182 X:8430419-8430466 6 153.5 6298 FBgn0261793 2407.63 30.94 47.70333333 0.063755644 4.961215255 3.217804486 0 1 0.5 0.01 dme-miR-1003-3p 6mer3-8 ATGTGA X 8431242 8431247 + X_8431242_8431247_+ 1 1 1 0 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 X + 8431190 8431377 3'utr Trf2 FlyBase G59825.1 TGAAAGATATTGAACAGATCGGAGCCGAAATGTATTTTTTGTGTATGCGAATATGTGAATAGGTCGACGATGGCCGAAGAACGTGTTACAATTGCAAAATTAACTTAGCCACTAAGCATTAGTCTTAAGTTAGCTGACAAACTGAATACTAAATTGTAAGCCACAATGCATATAGCAATGTAAAAAAG 59 8431226 0.972669941 23 56 377 0.956521739 1.819543936 0.304347826 0.169491525 0.289855072 59 3 0 66 X:8431190-8431377 6 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 ATGTGA 6mer3-8 dme-miR-1003-3p X + 8431199 8431283 3'utr Trf2 FlyBase G45224.1 TTGAACAGATCGGAGCCGAAATGTATTTTTTGTGTATGCGAATATGTGAATAGGTCGACGATGGCCGAAGAACGTGTTACAATTG 33 8431227 0.93140162 13 32 204 0.979591837 1.380211242 0.306122449 0.363636364 0.571428571 33 0 1 48 X:8431199-8431283 6 9 6299 FBgn0261793 2407.63 30.94 47.70333333 0.003738116 0.290885585 0.188666061 16 15 15.5 0.01 dme-miR-12-5p 6mer3-8 AATACT X 8431334 8431339 + X_8431334_8431339_+ 0.994120092 0.999885717 0.997002905 0.004076895 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 X + 8431190 8431377 3'utr Trf2 FlyBase G59825.1 TGAAAGATATTGAACAGATCGGAGCCGAAATGTATTTTTTGTGTATGCGAATATGTGAATAGGTCGACGATGGCCGAAGAACGTGTTACAATTGCAAAATTAACTTAGCCACTAAGCATTAGTCTTAAGTTAGCTGACAAACTGAATACTAAATTGTAAGCCACAATGCATATAGCAATGTAAAAAAG 59 8431361 0.972669941 23 56 377 0.956521739 1.819543936 0.304347826 0.169491525 0.289855072 59 3 0 66 X:8431190-8431377 6 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 AATACT 6mer3-8 dme-miR-12-5p X + 8431304 8431381 3'utr Trf2 FlyBase G45225.1 AGCATTAGTCTTAAGTTAGCTGACAAACTGAATACTAAATTGTAAGCCACAATGCATATAGCAATGTAAAAAAGAAAA 11 8431360 0.964840276 5 10 57 0.941176471 1.204119983 0.352941176 0.272727273 0.529411765 11 1 0 16 X:8431304-8431381 6 5.5 6300 FBgn0261793 2407.63 30.94 47.70333333 0.002284404 0.177763413 0.115295926 -27 -26 -26.5 0.01 dme-miR-33-5p 7mer-m8 CAATGCA X 8431353 8431359 + X_8431353_8431359_+ 0.621780146 0.674515173 0.64814766 0.037289347 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 X + 8431190 8431377 3'utr Trf2 FlyBase G59825.1 TGAAAGATATTGAACAGATCGGAGCCGAAATGTATTTTTTGTGTATGCGAATATGTGAATAGGTCGACGATGGCCGAAGAACGTGTTACAATTGCAAAATTAACTTAGCCACTAAGCATTAGTCTTAAGTTAGCTGACAAACTGAATACTAAATTGTAAGCCACAATGCATATAGCAATGTAAAAAAG 59 8431361 0.972669941 23 56 377 0.956521739 1.819543936 0.304347826 0.169491525 0.289855072 59 3 0 66 X:8431190-8431377 7 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 CAATGCA 7mer-m8 dme-miR-33-5p X + 8431304 8431381 3'utr Trf2 FlyBase G45225.1 AGCATTAGTCTTAAGTTAGCTGACAAACTGAATACTAAATTGTAAGCCACAATGCATATAGCAATGTAAAAAAGAAAA 11 8431360 0.964840276 5 10 57 0.941176471 1.204119983 0.352941176 0.272727273 0.529411765 11 1 0 16 X:8431304-8431381 7 6.5 6301 FBgn0261793 2407.63 30.94 47.70333333 0.00269975 0.210084034 0.136258822 -8 -7 -7.5 0.01 dme-miR-184-5p 6mer3-8 TGATAA X 8431908 8431913 + X_8431908_8431913_+ 0.992738574 1 0.996369287 0.005134585 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 X + 8431787 8431947 3'utr Trf2 FlyBase G59828.1 AAAAGCCTAAATAAGTGTATTTGGTTTCAAGAACTTTGAAAAAGCAAAACTTAATATTAATATAGTATACAGATATATTTTTGATTATTATGTATTTAATGAGAAACAATGAAACGATTAATGATAATGATGCAAGTATCGATGATAACTAAGTGAAAACA 23 8431896 0.98067994 15 21 147 0.892857143 1.397940009 0.25 0.217391304 0.357142857 23 3 0 25 X:8431787-8431947 6 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 TGATAA 6mer3-8 dme-miR-184-5p X + 8431876 8431924 3'utr Trf2 FlyBase G45228.1 ATGTATTTAATGAGAAACAATGAAACGATTAATGATAATGATGCAAGTA 9 8431904 0.961560289 4 9 46 1 1.176091259 0.333333333 0.555555556 0.733333333 9 0 0 15 X:8431876-8431924 6 8 6302 FBgn0261793 2407.63 30.94 47.70333333 0.00332277 0.258564964 0.167703165 12 4 8 0.01 dme-miR-14-3p 7mer-m8 AAGACTG X 8431992 8431998 + X_8431992_8431998_+ 0.671795832 0.671795351 0.671795591 2.83E-07 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 X + 8431959 8432106 3'utr Trf2 FlyBase G59829.1 CAAATAGCATAATTCTGTTTTTGTTTTGCCGTAAAGACTGCATTATACCAACAATTAATTATATACAAACATAATAAATAATTAACTGATAAATGGGGCGAGTAAGCTTTGCAACTAAGCTGAGAACAAAACGGATGGATAAACATTT 73 8432001 0.981840352 17 71 510 0.965116279 1.919078092 0.023255814 0.164383562 0.290697674 73 3 0 83 X:8431959-8432106 7 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 AAGACTG 7mer-m8 dme-miR-14-3p X + 8431961 8432014 3'utr Trf2 FlyBase G45229.1 AATAGCATAATTCTGTTTTTGTTTTGCCGTAAAGACTGCATTATACCAACAATT 42 8432001 0.970298474 12 41 314 0.982758621 1.755874856 0 0.30952381 0.5 42 1 0 57 X:8431961-8432014 7 51 6303 FBgn0261793 2407.63 30.94 47.70333333 0.021182657 1.648351648 1.069107679 -9 -9 -9 0.01 dme-miR-277-3p 6mer3-8 TGCATT X 8441353 8441358 - X_8441353_8441358_- 1 1 1 0 CG12123 FBtr0071245 8441245 8441410 X - 8441336 8441371 3'utr CG12123 FlyBase G65747.1 AAAAATTGTAAATTGCATTAGGTGGTCACGATTCGA 5 8441355 0.878273102 4 5 30 1 0.84509804 0.142857143 0.4 0.571428571 5 0 0 7 X:8441336-8441371 6 CG12123 FBtr0071245 8441245 8441410 TGCATT 6mer3-8 dme-miR-277-3p X - 8441341 8441370 3'utr CG12123 FlyBase G49507.1 AAAATTGTAAATTGCATTAGGTGGTCACGA 7 8441358 0.681940397 4 6 47 0.916666667 1.041392685 0 0.571428571 0.75 7 1 0 11 X:8441341-8441370 6 6 6304 FBgn0030039 53.33333333 6.263333333 9.543333333 0.1125 0.95795636 0.628711142 -3 0 -1.5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 8448086 8448092 - X_8448086_8448092_- 0.823349562 0.823349562 0.823349562 0 org-1 FBtr0345983|FBtr0071244 8447689|8447839 8448232|8448232 X - 8448064 8448106 3'utr org-1 FlyBase G65752.1 GTGTAAATCTCATGCCAAAGATTCGTTCTAAAATCAAGAATCT 11 8448094 0.944310903 2 9 79 0.833333333 1 0.25 0.090909091 0.166666667 11 2 0 10 X:8448064-8448106 7 org-1 FBtr0071244|FBtr0345983 8447839|8447689 8448232|8448232 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X - 8448074 8448108 3'utr org-1 FlyBase G49509.1 ATGTGTAAATCTCATGCCAAAGATTCGTTCTAAAA 8 8448094 0.854662071 2 7 47 0.916666667 1.041392685 0.166666667 0.5 0.666666667 8 1 0 11 X:8448074-8448108 7 9.5 6305 FBgn0021767 5 0.183333333 0.283333333 1.9 51.81818182 33.52941176 2 2 2 0.01 dme-miR-308-3p 7mer-m1 TGTGATT X 8555389 8555395 - X_8555389_8555395_- 0.443131018 0.443131018 0.443131018 0 IntS4 FBtr0071234 8555237 8555552 X - 8555366 8555421 3'utr IntS4 FlyBase G65758.2 GAGCAACTGTTATTTAAATATATGTATGTGATTGTTTAAGATACCATAGCAGTTGG 18 8555389 0.713278724 6 16 143 1 1.361727836 0.304347826 0.222222222 0.391304348 18 0 0 23 X:8555366-8555421 7 IntS4 FBtr0071234 8555237 8555552 TGTGATT 7mer-m1 dme-miR-308-3p X - 8555358 8555406 3'utr IntS4 FlyBase G49512.1 AAATATATGTATGTGATTGTTTAAGATACCATAGCAGTTGGTTGCCAAA 12 8555390 0.988335515 7 11 101 0.944444444 1.230448921 0 0.416666667 0.611111111 12 1 0 17 X:8555358-8555406 7 11.5 6306 FBgn0026679 250.3333333 8.63 13.06666667 0.045938748 1.332560834 0.880102041 -6 -5 -5.5 0.01 "dme-miR-995-3p,dme-miR-998-3p" 6mer2-7 GGTGCT X 8555524 8555529 - X_8555524_8555529_- 1 1 1 0 IntS4 FBtr0071234 8555237 8555552 X - 8555507 8555555 stop_codon IntS4 FlyBase G65759.1 TAGCCTGACTTCCAGGTAATGGACTAGGTGCTTTTTGTCCTGGCGACGC 9 8555536 0.822942665 3 9 69 1 0.954242509 0 0 0 9 0 0 9 X:8555507-8555555 6 IntS4 FBtr0071234 8555237 8555552 GGTGCT 6mer2-7 "dme-miR-995-3p,dme-miR-998-3p" X - 8555498 8555547 3'utr IntS4 FlyBase G49513.1 CTTCCAGGTAATGGACTAGGTGCTTTTTGTCCTGGCGACGCGGAGCGAGA 12 8555536 0.977001814 5 12 78 1 1.278753601 0.052631579 0.333333333 0.578947368 12 0 0 19 X:8555498-8555547 6 9.5 6307 FBgn0026679 250.3333333 8.63 13.06666667 0.037949401 1.100811124 0.727040816 7 7 7 0.01 dme-miR-283-5p 8mer-A1 TGATATTA X 8558901 8558908 - X_8558901_8558908_- 0.592192292 0.592192292 0.592192292 0 CG12112 FBtr0071233|FBtr0331727 8558877|8558877 8559220|8559220 X - 8558884 8558930 3'utr CG12112 FlyBase G65765.1 AATATAATTATTAAATGCCTGGTGATATTAGCATTATCACTCTTGTG 42 8558903 0.646701988 7 40 325 0.945454545 1.716003344 0.018181818 0.261904762 0.436363636 42 3 0 52 X:8558884-8558930 8 CG12112 FBtr0331727|FBtr0071233 8558877|8558877 8559220|8559220 TGATATTA 8mer-A1 dme-miR-283-5p X - 8558883 8558935 3'utr CG12112 FlyBase G49515.1 AAAATAATATAATTATTAAATGCCTGGTGATATTAGCATTATCACTCTTGTGA 28 8558902 0.662221473 8 27 228 1 1.602059991 0 0.285714286 0.5 28 0 0 40 X:8558883-8558935 8 34.5 6308 FBgn0030048 960.5366667 106.9333333 163.9633333 0.035917421 0.322630923 0.210412897 -5 -6 -5.5 0.01 dme-miR-988-3p 6mer3-8 ACAAGG X 8559186 8559191 - X_8559186_8559191_- 1 1 1 0 CG12112 FBtr0071233|FBtr0331727 8558877|8558877 8559220|8559220 X - 8559167 8559226 stop_codon CG12112 FlyBase G65767.1 TCATAACTGTGCCCATGTGAGATGACATAGTAGAAACAAGGATTTAAATATAAGTAATGA 50 8559183 0.724686506 9 49 263 0.965517241 1.748188027 0.206896552 0.16 0.275862069 50 2 0 56 X:8559167-8559226 6 CG12112 FBtr0331727|FBtr0071233 8558877|8558877 8559220|8559220 ACAAGG 6mer3-8 dme-miR-988-3p X - 8559099 8559223 stop_codon CG12112 FlyBase G49516.1 TAACTGTGCCCATGTGAGATGACATAGTAGAAACAAGGATTTAAATATAAGTAATGATTTACGGGCGAATCAATCCGAATTGAGGATGAATACCCAAATAGTGGTTGATGGATCATCATCACTTT 50 8559184 0.964030472 13 49 286 0.9875 1.897627091 0.125 0.4 0.625 50 1 0 79 X:8559099-8559223 6 34.5 6309 FBgn0030048 960.5366667 106.9333333 163.9633333 0.035917421 0.322630923 0.210412897 -8 -7 -7.5 0.01 dme-miR-263a-5p 7mer-A1 TGCCATA X 8567613 8567619 + X_8567613_8567619_+ 0.782911824 0.782911824 0.782911824 0 Trf4-1 FBtr0112964|FBtr0331725 8566937|8566937 8570159|8570159 X + 8567583 8567624 3'utr Trf4-1 FlyBase G59860.1 CGTAACTAATTCCCTATCCACCCCATTTCCTGCCATACAAAA 24 8567609 0.722021287 3 24 138 1 1.531478917 0 0.375 0.558823529 24 0 0 34 X:8567583-8567624 7 Trf4-1 FBtr0331725|FBtr0112964 8566937|8566937 8570159|8570159 TGCCATA 7mer-A1 dme-miR-263a-5p X + 8567581 8567631 3'utr Trf4-1 FlyBase G45249.1 AACGTAACTAATTCCCTATCCACCCCATTTCCTGCCATACAAAAAAAAAAA 13 8567609 0.964592749 4 13 68 1 1.255272505 0 0.307692308 0.5 13 0 0 18 X:8567581-8567631 7 17.5 6310 FBgn0030049 670.8133333 17.65 27.06666667 0.026087734 0.991501416 0.646551724 4 4 4 0.01 dme-miR-980-5p 7mer-m1 AAAAACT X 8567795 8567801 + X_8567795_8567801_+ 0.765586663 0.765586663 0.765586663 0 Trf4-1 FBtr0112964|FBtr0331725 8566937|8566937 8570159|8570159 X + 8567771 8567808 3'utr Trf4-1 FlyBase G59861.1 TGCGCAATGACCCTTGTAACTTCCAAAAACTCGTTTAA 10 8567789 0.651641957 4 10 61 1 1 0.1 0 0 10 0 0 10 X:8567771-8567808 7 Trf4-1 FBtr0331725|FBtr0112964 8566937|8566937 8570159|8570159 AAAAACT 7mer-m1 dme-miR-980-5p X + 8567777 8567804 3'utr Trf4-1 FlyBase G45250.1 ATGACCCTTGTAACTTCCAAAAACTCGT 6 8567789 0.654332315 2 6 32 1 1.041392685 0 0.833333333 0.909090909 6 0 0 11 X:8567777-8567804 7 8 6311 FBgn0030049 670.8133333 17.65 27.06666667 0.011925821 0.45325779 0.295566502 6 6 6 0.01 dme-miR-317-3p 6mer3-8 TGTGTT X 8567994 8567999 + X_8567994_8567999_+ 1 1 1 0 Trf4-1 FBtr0112964|FBtr0331725 8566937|8566937 8570159|8570159 X + 8567927 8568013 3'utr Trf4-1 FlyBase G59863.1 AATTAAGGTAAAAAAAATTGTGAGCCTACTTAAATTGTTCGAACACATTGTCCAACCCCAAAGCAATTGTGTTTTAAAGCTAAAACA 32 8567993 0.85903393 10 32 186 1 1.556302501 0.055555556 0.125 0.222222222 32 0 0 36 X:8567927-8568013 6 Trf4-1 FBtr0331725|FBtr0112964 8566937|8566937 8570159|8570159 TGTGTT 6mer3-8 dme-miR-317-3p X + 8567923 8568011 3'utr Trf4-1 FlyBase G45252.1 TTATAATTAAGGTAAAAAAAATTGTGAGCCTACTTAAATTGTTCGAACACATTGTCCAACCCCAAAGCAATTGTGTTTTAAAGCTAAAA 20 8567994 0.950491038 7 18 119 0.923076923 1.380211242 0.384615385 0.25 0.423076923 20 2 0 24 X:8567923-8568011 6 13.5 6312 FBgn0030049 670.8133333 17.65 27.06666667 0.020124824 0.764872521 0.498768473 1 0 0.5 0.01 dme-miR-263a-5p 7mer-m1 TGCCATT X 8568162 8568168 + X_8568162_8568168_+ 0.765586663 0.765586663 0.765586663 0 Trf4-1 FBtr0112964|FBtr0331725 8566937|8566937 8570159|8570159 X + 8568139 8568183 3'utr Trf4-1 FlyBase G59864.1 GTTGTGCATTTTGCATAGATTCCTGCCATTTGTTTGTATAGTTGT 137 8568158 0.835097401 4 134 1343 0.988636364 2.240549248 0.477272727 0.240875912 0.409090909 137 2 0 174 X:8568139-8568183 7 Trf4-1 FBtr0331725|FBtr0112964 8566937|8566937 8570159|8570159 TGCCATT 7mer-m1 dme-miR-263a-5p X + 8568138 8568187 3'utr Trf4-1 FlyBase G45253.1 TGTTGTGCATTTTGCATAGATTCCTGCCATTTGTTTGTATAGTTGTTCAC 83 8568158 0.830157771 4 82 791 0.992248062 2.10720997 0.457364341 0.385542169 0.604651163 83 1 0 128 X:8568138-8568187 7 109.5 6313 FBgn0030049 670.8133333 17.65 27.06666667 0.16323468 6.203966006 4.045566502 4 4 4 0.01 dme-bantam-3p 7mer-m8 TGATCTC X 8591045 8591051 - X_8591045_8591051_- 0.661614859 0.563805901 0.61271038 0.069161407 CG12659 FBtr0332627 8590773 8591302 X - 8590979 8591089 3'utr CG12659 FlyBase G65774.1 ATATATATATATATATGCATACACTGCCTAAAAGGAGATGATCTCTGTAAATTAGTTATAGAGATTTGTCACTAGTTTGACCGCAAAAATAGATTAGGTAATTCCAAGGTG 54 8591051 0.985209668 9 52 420 0.966666667 1.286306739 0.05 0.092592593 0.183333333 54 0 2 58 X:8590979-8591089 7 CG12659 FBtr0332627 8590773 8591302 TGATCTC 7mer-m8 dme-bantam-3p X - 8591024 8591095 3'utr CG12659 FlyBase G49523.1 ATTACCATATATATATATATATGCATACACTGCCTAAAAGGAGATGATCTCTGTAAATTAGTTATAGAGATT 32 8591044 0.793825522 9 30 240 0.906976744 1.591064607 0.046511628 0.15625 0.372093023 32 4 0 39 X:8591024-8591095 7 17.5 6314 FBgn0040929 86.03333333 12.17 18.70333333 0.203409531 1.437962202 0.935662092 0 -7 -3.5 0.01 dme-miR-34-5p 7mer-m8 CACTGCC X 8591062 8591068 - X_8591062_8591068_- 0.708953337 0.639261035 0.674107186 0.049279898 CG12659 FBtr0332627 8590773 8591302 X - 8590979 8591089 3'utr CG12659 FlyBase G65774.1 ATATATATATATATATGCATACACTGCCTAAAAGGAGATGATCTCTGTAAATTAGTTATAGAGATTTGTCACTAGTTTGACCGCAAAAATAGATTAGGTAATTCCAAGGTG 54 8591051 0.985209668 9 52 420 0.966666667 1.286306739 0.05 0.092592593 0.183333333 54 0 2 58 X:8590979-8591089 7 CG12659 FBtr0332627 8590773 8591302 CACTGCC 7mer-m8 dme-miR-34-5p X - 8591024 8591095 3'utr CG12659 FlyBase G49523.1 ATTACCATATATATATATATATGCATACACTGCCTAAAAGGAGATGATCTCTGTAAATTAGTTATAGAGATT 32 8591044 0.793825522 9 30 240 0.906976744 1.591064607 0.046511628 0.15625 0.372093023 32 4 0 39 X:8591024-8591095 7 13.5 6315 FBgn0040929 86.03333333 12.17 18.70333333 0.156915924 1.109285127 0.721796471 -17 -24 -20.5 0.01 dme-miR-986-5p 6mer3-8 ATTCGA X 8591145 8591150 - X_8591145_8591150_- 1 1 1 0 CG12659 FBtr0332627 8590773 8591302 X - 8591098 8591162 3'utr CG12659 FlyBase G65775.1 TGCTTTCAAGTGATTCGATGACTGTTTCCTGCCTGGAACACCGCGTTCAAGGGGAGTTACATCCA 39 8591137 0.981608226 8 38 275 0.976190476 1.612783857 0.476190476 0.076923077 0.142857143 39 1 0 41 X:8591098-8591162 6 CG12659 FBtr0332627 8590773 8591302 ATTCGA 6mer3-8 dme-miR-986-5p X - 8591114 8591208 3'utr CG12659 FlyBase G49524.1 AGAGCGCTGCTGACCTTACTCTTACTGGCATTGCGTGCGAGGCTGTTGCTTTCAAGTGATTCGATGACTGTTTCCTGCCTGGAACACCGCGTTCA 22 8591137 0.977094262 8 22 144 1 1.491361694 0.677419355 0.409090909 0.580645161 22 0 0 31 X:8591114-8591208 6 24 6316 FBgn0040929 86.03333333 12.17 18.70333333 0.278961643 1.972062449 1.283193727 -13 -13 -13 0.01 dme-miR-965-3p 7mer-A1 ACGCTTA X 8600774 8600780 + X_8600774_8600780_+ 0.823349562 0.823349562 0.823349562 0 Crag FBtr0343356|FBtr0071219|FBtr0071220 8600627|8600627|8600627 8602036|8601231|8601231 X + 8600738 8600822 3'utr Crag FlyBase G59911.1 AAAATGGAAACGAAGGGAGAGTTTGACGACAACGAAACGCTTATCACACACCTTAGGCTGGGTCGATTTTATAGATGGGACAAGT 91 8600790 0.838507163 11 84 453 0.962962963 1.414973348 0.12962963 0.142857143 0.277777778 91 1 3 104 X:8600738-8600822 7 Crag FBtr0343356|FBtr0071219|FBtr0071220 8600627|8600627|8600627 8602036|8601231|8601231 ACGCTTA 7mer-A1 dme-miR-965-3p X + 8600718 8600822 3'utr Crag FlyBase G45288.1 CGACCAAATAACTTGATAACAAAATGGAAACGAAGGGAGAGTTTGACGACAACGAAACGCTTATCACACACCTTAGGCTGGGTCGATTTTATAGATGGGACAAGT 51 8600790 0.964294698 10 47 235 0.904109589 1.51851394 0.246575342 0.37254902 0.561643836 51 6 1 66 X:8600718-8600822 7 37.5 6317 FBgn0025864 2284.02 39.50333333 60.84 0.01641842 0.94928698 0.616370809 -16 -16 -16 0.01 dme-miR-317-3p 6mer2-7 GTGTTC X 8600959 8600964 + X_8600959_8600964_+ 1 1 1 0 Crag FBtr0343356|FBtr0071219|FBtr0071220 8600627|8600627|8600627 8602036|8601231|8601231 X + 8600948 8600980 3'utr Crag FlyBase G59912.1 CTTGATTCGAAGTGTTCTTAGGTTTTCAAACTA 14 8600965 0.738327793 2 14 133 1 1.176091259 0.066666667 0.071428571 0.133333333 14 0 0 15 X:8600948-8600980 6 Crag FBtr0343356|FBtr0071219|FBtr0071220 8600627|8600627|8600627 8602036|8601231|8601231 GTGTTC 6mer2-7 dme-miR-317-3p X + 8600949 8600974 3'utr Crag FlyBase G45289.1 TTGATTCGAAGTGTTCTTAGGTTTTC 10 8600965 0.744386838 2 10 90 1 1.176091259 0.133333333 0.4 0.6 10 0 0 15 X:8600949-8600974 6 12 6318 FBgn0025864 2284.02 39.50333333 60.84 0.005253894 0.303771834 0.197238659 -6 -6 -6 0.01 dme-bantam-3p 6mer3-8 TGATCT X 8601159 8601164 + X_8601159_8601164_+ 1 1 1 0 Crag FBtr0343356|FBtr0071219|FBtr0071220 8600627|8600627|8600627 8602036|8601231|8601231 X + 8601145 8601192 3'utr Crag FlyBase G59913.1 TTTTGTAAATGACTTGATCTTAACATTTAAGTACTTAACGATTTTTCG 14 8601161 0.986132383 6 12 123 0.894736842 1.230448921 0.052631579 0.357142857 0.526315789 14 2 0 17 X:8601145-8601192 6 Crag FBtr0343356|FBtr0071219|FBtr0071220 8600627|8600627|8600627 8602036|8601231|8601231 TGATCT 6mer3-8 dme-bantam-3p X + 8601083 8601177 3'utr Crag FlyBase G45290.1 CGAACTTTCCTAAGTGAAAGCCCCAACTTGACATGTGTTGCATTGTGAAAACATGCAAATGATTTTGTAAATGACTTGATCTTAACATTTAAGTA 12 8601159 0.986541982 9 12 92 1 1.255272505 0.055555556 0.333333333 0.555555556 12 0 0 18 X:8601083-8601177 6 9 6319 FBgn0025864 2284.02 39.50333333 60.84 0.003940421 0.227828875 0.147928994 -2 0 -1 0.01 dme-miR-305-3p 6mer3-8 ATGTGC X 8601554 8601559 + X_8601554_8601559_+ 1 1 1 0 Crag FBtr0343356 8600627 8602036 X + 8601515 8601575 3'utr Crag FlyBase G59915.1 ATAATATAACGATACATATTCGTGTACATACAAAGCTATATGTGCGATCCTGTAAATCAGC 10 8601555 0.97910455 2 10 74 1 1.113943352 0.538461538 0.3 0.461538462 10 0 0 13 X:8601515-8601575 6 Crag FBtr0343356 8600627 8602036 ATGTGC 6mer3-8 dme-miR-305-3p X + 8601542 8601579 3'utr Crag FlyBase G45291.1 ATACAAAGCTATATGTGCGATCCTGTAAATCAGCATTG 8 8601555 0.960105042 3 8 50 1 0.954242509 0.333333333 0.125 0.222222222 8 0 0 9 X:8601542-8601579 6 8.5 6320 FBgn0025864 2284.02 39.50333333 60.84 0.003721509 0.215171715 0.139710717 -1 -1 -1 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA X 8602193 8602198 - X_8602193_8602198_- 0.999999904 0.999999998 0.999999951 7.07E-08 Caf1-180 FBtr0071228 8602135 8602511 X - 8602168 8602223 3'utr Caf1-180 FlyBase G65777.1 ATGCAATAATACACTACCTACCTGATGATGATCTTTCATTTGATGGCGATTTTGGG 18 8602198 0.976497014 5 17 114 0.958333333 1.361727836 0 0.277777778 0.458333333 18 1 0 23 X:8602168-8602223 6 Caf1-180 FBtr0071228 8602135 8602511 TGATGA 6mer3-8 dme-miR-2a-2-5p X - 8602185 8602219 3'utr Caf1-180 FlyBase G49526.1 AATAATACACTACCTACCTGATGATGATCTTTCAT 10 8602197 0.782452257 3 10 61 1 1.113943352 0 0.3 0.461538462 10 0 0 13 X:8602185-8602219 6 12 6321 FBgn0030054 1600.7 48.52 75.10666667 0.00749672 0.247320692 0.159772768 0 -1 -0.5 0.01 dme-miR-277-3p 6mer3-8 TGCATT X 8688487 8688492 + X_8688487_8688492_+ 1 1 1 0 CG11284 FBtr0071222|FBtr0331731|FBtr0331730|FBtr0345984|FBtr0331729 8688176|8688176|8688176|8688176|8688176 8688760|8688760|8688760|8688760|8688760 X + 8688411 8688567 3'utr CG11284 FlyBase G59935.1 TATATATATATATATATACGGAGTATTTACGATACGGATACGTGTATGGAATTTTAGTCGGAGCACGCGGTTGCCTTGCATTGAATATTTCAGAGAAATATCGGGCACAACTACTTAAGACATCTACAAGAGACGTAATCCTAACGTTTAAGTTATT 49 8688482 0.784323103 19 45 307 0.915254237 1.255272505 0.152542373 0.12244898 0.271186441 49 3 2 54 X:8688411-8688567 6 CG11284 FBtr0345984|FBtr0331730|FBtr0331731|FBtr0071222|FBtr0331729 8688176|8688176|8688176|8688176|8688176 8688760|8688760|8688760|8688760|8688760 TGCATT 6mer3-8 dme-miR-277-3p X + 8688411 8688549 3'utr CG11284 FlyBase G45304.1 TATATATATATATATATACGGAGTATTTACGATACGGATACGTGTATGGAATTTTAGTCGGAGCACGCGGTTGCCTTGCATTGAATATTTCAGAGAAATATCGGGCACAACTACTTAAGACATCTACAAGAGACGTAAT 34 8688481 0.819811544 15 30 210 0.916666667 1.166331422 0.291666667 0.264705882 0.479166667 34 2 2 44 X:8688411-8688549 6 17 6322 FBgn0030056 1071.946667 65.25333333 99.50666667 0.015858998 0.260523089 0.170842825 5 6 5.5 0.01 dme-miR-305-5p 7mer-A1 GTACAAA X 8712521 8712527 - X_8712521_8712527_- 0.782911824 0.782911824 0.782911824 0 CG2004 FBtr0332958|FBtr0071281|FBtr0332960|FBtr0346167|FBtr0332957 8712470|8712470|8712470|8712470|8712470 8712597|8712597|8712597|8712597|8712597 X - 8712500 8712542 3'utr CG2004 FlyBase G65795.1 TGTAACCCATATAATGTACAAAACGTAACTCCAGATAATTAAA 7 8712528 0.945332781 3 7 34 1 0.954242509 0.111111111 0.142857143 0.333333333 7 0 0 9 X:8712500-8712542 7 CG2004 FBtr0332957|FBtr0332960|FBtr0346167|FBtr0332958|FBtr0071281 8712470|8712470|8712470|8712470|8712470 8712597|8712597|8712597|8712597|8712597 GTACAAA 7mer-A1 dme-miR-305-5p X - 8712512 8712539 3'utr CG2004 FlyBase G49537.1 AACCCATATAATGTACAAAACGTAACTC 5 8712528 0.657908897 2 5 20 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 X:8712512-8712539 7 6 6323 FBgn0030060 282.3166667 21.61333333 33.1 0.02125273 0.277606416 0.181268882 1 1 1 0.01 dme-miR-980-5p 6mer3-8 GAAAAA X 8716788 8716793 - X_8716788_8716793_- 1 1 1 0 l(1)G0020 FBtr0071280|FBtr0344164 8716711|8716711 8716819|8716946 X - 8716760 8716802 3'utr l(1)G0020 FlyBase G65808.1 GTTTGGGGGGAAAAAGAATGTGGATTTTAATTCTATAGAAAAG 7 8716772 0.763847003 6 7 53 1 0.84509804 0.571428571 0 0 7 0 0 7 X:8716760-8716802 6 l(1)G0020 FBtr0344164|FBtr0071280 8716711|8716711 8716946|8716819 GAAAAA 6mer3-8 dme-miR-980-5p X - 8716769 8716802 3'utr l(1)G0020 FlyBase G49544.1 GTTTGGGGGGAAAAAGAATGTGGATTTTAATTCT 10 8716778 0.637070934 5 9 65 0.944444444 0.929418926 0.666666667 0.5 0.722222222 10 0 1 17 X:8716769-8716802 6 8 6324 FBgn0027330 778.15 29.23666667 45.09666667 0.010280794 0.273629005 0.177396703 -21 -15 -18 0.01 dme-miR-980-5p 6mer3-8 GAAAAA X 8873058 8873063 - X_8873058_8873063_- 0.948387954 0.999999981 0.974193968 0.036495195 Moe FBtr0331601|FBtr0071269|FBtr0308193|FBtr0071274 8873010|8873010|8873010|8873010 8873946|8873946|8873946|8873946 X - 8873008 8873083 3'utr Moe FlyBase G65818.1 AAACAACAAAAAACTATTGTGAAAAAACCAAACAAAAAGTTTTTAAATTAAACAATAAAAATGTAAAACAACAAAA 95 8873067 0.91547082 6 89 294 0.948275862 1.439332694 0 0.168421053 0.318965517 95 3 3 110 X:8873008-8873083 6 Moe FBtr0308193|FBtr0071274|FBtr0331601|FBtr0071269 8873010|8873010|8873010|8873010 8873946|8873946|8873946|8873946 GAAAAA 6mer3-8 dme-miR-980-5p X - 8873031 8873084 3'utr Moe FlyBase G49549.1 CAAACAACAAAAAACTATTGTGAAAAAACCAAACAAAAAGTTTTTAAATTAAAC 65 8873067 0.907669541 3 63 199 0.968421053 1.486666573 0 0.369230769 0.568421053 65 1 2 92 X:8873031-8873084 6 77.5 6325 FBgn0011661 40921.94667 1697.71 2611.596667 0.001893849 0.045649728 0.029675333 4 4 4 0.01 dme-miR-277-3p 7mer-m8 TGCATTT X 8873294 8873300 - X_8873294_8873300_- 0.620204266 0.620204266 0.620204266 0 Moe FBtr0331601|FBtr0071269|FBtr0308193|FBtr0071274 8873010|8873010|8873010|8873010 8873946|8873946|8873946|8873946 X - 8873257 8873322 3'utr Moe FlyBase G65821.1 TACAACAAAACAAACAACTATTTGCATTTTCCCCCGTTATAATTATTATTTTTATTATTATATAAT 85 8873301 0.984996478 6 81 669 0.971153846 2.004321374 0 0.188235294 0.336538462 85 3 0 101 X:8873257-8873322 7 Moe FBtr0308193|FBtr0071274|FBtr0331601|FBtr0071269 8873010|8873010|8873010|8873010 8873946|8873946|8873946|8873946 TGCATTT 7mer-m8 dme-miR-277-3p X - 8873276 8873315 3'utr Moe FlyBase G49552.1 AAACAAACAACTATTTGCATTTTCCCCCGTTATAATTATT 50 8873301 0.70646742 4 48 401 0.971428571 1.531478917 0 0.34 0.528571429 50 1 1 68 X:8873276-8873315 7 65.5 6326 FBgn0011661 40921.94667 1697.71 2611.596667 0.001600608 0.038581383 0.025080442 1 1 1 0.01 dme-miR-307a-3p 8mer-A1 GGTTGTGA X 8898980 8898987 - X_8898980_8898987_- 0.674976886 0.674981953 0.67497942 3.61E-06 CG1885 FBtr0333606 8898552 8899226 X - 8898956 8899006 3'utr CG1885 FlyBase G65841.1 GTAGAAAATTTCGAGCTTTGGTTGTGATTCGATTCGATTGATTAGTTATCT 58 8898988 0.708201864 8 57 580 0.986111111 1.851258349 0.277777778 0.206896552 0.361111111 58 1 0 71 X:8898956-8899006 8 CG1885 FBtr0333606 8898552 8899226 GGTTGTGA 8mer-A1 dme-miR-307a-3p X - 8898952 8899007 3'utr CG1885 FlyBase G49569.1 TGTAGAAAATTTCGAGCTTTGGTTGTGATTCGATTCGATTGATTAGTTATCTTTAT 37 8898988 0.960006183 7 35 361 0.9375 1.352182518 0.208333333 0.297297297 0.458333333 37 2 1 45 X:8898952-8899007 8 47 6327 FBgn0030066 139.3333333 11.45 17.55333333 0.337320574 4.104803493 2.677554121 1 1 1 0.01 dme-miR-965-3p 7mer-A1 ACGCTTA X 8903415 8903421 + X_8903415_8903421_+ 0.823349562 0.823349562 0.823349562 0 Rbm13 FBtr0346163|FBtr0071255 8903356|8903356 8903761|8903464 X + 8903403 8903441 3'utr Rbm13 FlyBase G59960.1 ACTTAGCTGTTAACGCTTATTGTTTAGCCGGTTAAGAAT 14 8903422 0.655924092 5 13 135 0.944444444 1.230448921 0.333333333 0.214285714 0.388888889 14 1 0 17 X:8903403-8903441 7 Rbm13 FBtr0071255|FBtr0346163 8903356|8903356 8903464|8903761 ACGCTTA 7mer-A1 dme-miR-965-3p X + 8903403 8903439 3'utr Rbm13 FlyBase G45332.1 ACTTAGCTGTTAACGCTTATTGTTTAGCCGGTTAAGA 12 8903423 0.616219647 5 11 110 0.875 1.146128036 0.25 0.25 0.4375 12 2 0 14 X:8903403-8903439 7 12.5 6328 FBgn0030067 1128.99 111.6733333 171.8733333 0.011071843 0.111933616 0.072727978 -7 -8 -7.5 0.01 dme-miR-190-5p 6mer3-8 ACATAT X 8905032 8905037 - X_8905032_8905037_- 1 1 1 0 e(r) FBtr0071267|FBtr0333604|FBtr0310067|FBtr0071266|FBtr0333605 8904142|8904357|8904357|8904726|8904357 8905063|8905063|8905063|8905063|8905063 X - 8904991 8905063 3'utr e(r) FlyBase G65845.1 AGGGACGGCGATGCGACAAGATACATACATATAAAACCAAATAACACGATGATGCATGCATCAATGCGTGCAA 12 8905041 0.807881405 6 12 42 1 1.079181246 0.166666667 0 0 12 0 0 12 X:8904991-8905063 6 e(r) FBtr0333604|FBtr0310067|FBtr0071266|FBtr0333605|FBtr0071267 8904357|8904357|8904726|8904357|8904142 8905063|8905063|8905063|8905063|8905063 ACATAT 6mer3-8 dme-miR-190-5p X - 8905024 8905065 stop_codon e(r) FlyBase G49574.1 AAAGGGACGGCGATGCGACAAGATACATACATATAAAACCAA 7 8905042 0.938176824 3 5 20 0.692307692 0.954242509 0 0.571428571 0.769230769 7 4 0 9 X:8905024-8905065 6 5.5 6329 FBgn0011586 7031.946667 923.7566667 1422.636667 0.000782145 0.005953949 0.003866061 4 5 4.5 0.01 dme-miR-317-3p 8mer-A1 TGTGTTCA X 8973005 8973012 - X_8973005_8973012_- 0.631136783 0.631136783 0.631136783 0 CG10962 FBtr0071263 8972906 8973203 X - 8973000 8973034 3'utr CG10962 FlyBase G65851.1 CGTTTCGTTTTATTTTTATTATTGTGTTCAGTTAC 50 8973013 0.766576934 3 49 665 0.984615385 1.806179974 0.030769231 0.24 0.415384615 50 1 0 64 X:8973000-8973034 8 CG10962 FBtr0071263 8972906 8973203 TGTGTTCA 8mer-A1 dme-miR-317-3p X - 8973000 8973050 3'utr CG10962 FlyBase G49578.1 CTGTTGGCACTCACCTCGTTTCGTTTTATTTTTATTATTGTGTTCAGTTAC 67 8973013 0.75951168 8 64 872 0.947916667 1.180890142 0.197916667 0.343283582 0.541666667 67 0 5 91 X:8973000-8973050 8 55.5 6330 FBgn0030073 904.93 102.5533333 154.9166667 0.061330711 0.541181824 0.358257127 1 1 1 0.01 dme-miR-12-5p 7mer-A1 ATACTCA X 8973081 8973087 - X_8973081_8973087_- 0.823349562 0.823349562 0.823349562 0 CG10962 FBtr0071263 8972906 8973203 X - 8973065 8973102 3'utr CG10962 FlyBase G65852.1 ATGACACACGGCGAGATACTCACATACCCCCCCACATT 29 8973078 0.961749815 2 29 64 1 1.51851394 0.03030303 0.137931034 0.242424242 29 0 0 33 X:8973065-8973102 7 CG10962 FBtr0071263 8972906 8973203 ATACTCA 7mer-A1 dme-miR-12-5p X - 8973063 8973102 3'utr CG10962 FlyBase G49579.1 ATGACACACGGCGAGATACTCACATACCCCCCCACATTTG 26 8973078 0.938274705 3 24 62 0.956521739 1.643452676 0.173913043 0.576923077 0.760869565 26 2 0 44 X:8973063-8973102 7 27 6331 FBgn0030073 904.93 102.5533333 154.9166667 0.029836562 0.263277644 0.174287251 -9 -9 -9 0.01 dme-miR-13b-2-5p 6mer3-8 TTTGAC X 9072608 9072613 - X_9072608_9072613_- 1 1 1 0 CG44325 FBtr0339661 9072293 9072906 X - 9072591 9072613 3'utr CG44325 FlyBase G65862.1 TTTGACCTTTTTTGCAAATTTTG 6 9072604 0.688614511 5 6 72 1 0.903089987 0 0.333333333 0.5 6 0 0 8 X:9072591-9072613 6 CG44325 FBtr0339661 9072293 9072906 TTTGAC 6mer3-8 dme-miR-13b-2-5p X - 9072591 9072613 3'utr CG44325 FlyBase G49589.1 TTTGACCTTTTTTGCAAATTTTG 7 9072604 0.691535957 4 6 85 0.777777778 0.84509804 0 0.285714286 0.444444444 7 2 0 7 X:9072591-9072613 6 6.5 6332 FBgn0265413 401.4 65.42666667 100.4933333 0.016193323 0.09934787 0.064680908 -9 -9 -9 0.01 dme-miR-970-3p 6mer2-7 CTTATG X 9082121 9082126 + X_9082121_9082126_+ 1 1 1 0 HP1b FBtr0301805|FBtr0309871|FBtr0071284 9082080|9082080|9082080 9082358|9082746|9082358 X + 9081992 9082162 stop_codon HP1b FlyBase G59971.2 AGCCCCATTGGCAGCATCAATCAAGACGAGAATATCAAGCCGGACGAGAGTAGTGAGCTGGACAACGGACAGCCGGATGCGGATGACTAGTTGAGTGGCAGATACAGATGACTGTTTCGGATTCACTCGCTTATGTGGATACATACACACCGGCTTTATACGATATATGTA 18 9082149 0.966189775 13 16 87 0.9 0.954242509 0.25 0.111111111 0.2 18 1 1 18 X:9081992-9082162 6 HP1b FBtr0301805|FBtr0309871|FBtr0071284 9082080|9082080|9082080 9082358|9082746|9082358 CTTATG 6mer2-7 dme-miR-970-3p X + 9082070 9082162 stop_codon HP1b FlyBase G45341.1 GCGGATGACTAGTTGAGTGGCAGATACAGATGACTGTTTCGGATTCACTCGCTTATGTGGATACATACACACCGGCTTTATACGATATATGTA 11 9082105 0.98785604 8 9 64 0.916666667 1.041392685 0.166666667 0.090909091 0.166666667 11 1 0 11 X:9082070-9082162 6 3.5 6333 FBgn0030082 829 90.43666667 138.0533333 0.004221954 0.038701117 0.025352521 -28 16 -6 0.01 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA X 9088039 9088045 + X_9088039_9088045_+ 0.823349562 0.823349562 0.823349562 0 CG32706 FBtr0071287 9088008 9088073 X + 9088023 9088049 3'utr CG32706 FlyBase G59979.1 CTTTGCTTCCAATGTCTACCTGACTGC 5 9088036 0.707473925 2 2 28 0.666666667 0.602059991 0.166666667 0.2 0.333333333 5 2 0 4 X:9088023-9088049 7 CG32706 FBtr0071287 9088008 9088073 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" X + 9088018 9088051 3'utr CG32706 FlyBase G45348.1 TAGACCTTTGCTTCCAATGTCTACCTGACTGCAA 5 9088037 0.931568935 3 5 35 1 0.698970004 0.2 0 0 5 0 0 5 X:9088018-9088051 7 4.5 6334 FBgn0052706 14.77333333 2.05 3.03 0.304602888 2.195121951 1.485148515 3 2 2.5 0.01 dme-miR-980-3p 8mer-A1 GGCAGCTA X 9093750 9093757 - X_9093750_9093757_- 0.668734347 0.668734347 0.668734347 0 CG7766 FBtr0114594|FBtr0309250|FBtr0343319|FBtr0071351|FBtr0071352|FBtr0114595|FBtr0309251 9093610|9093610|9093610|9093610|9093610|9093610|9093610 9094242|9094242|9094242|9094242|9094242|9094242|9094242 X - 9093721 9093895 3'utr CG7766 FlyBase G65868.1 TGTACGTATGTGTTGAGACCTTGGAAAGATACTCCAAAACTGCACCCAAAAAACCGATCCTAACCCCGCCACACCACCCAGCCAATCCATTTAGTAAGCCAACCCATGCTGCTCGGATACAGATTTGTTTTTTGTACTGGCAGCTATTTTACAGCGACAACACTTTCGATTGTTT 47 9093758 0.987847864 16 45 396 0.961538462 1.698970004 0.153846154 0.106382979 0.192307692 47 2 0 50 X:9093721-9093895 8 CG7766 FBtr0114595|FBtr0309251|FBtr0071351|FBtr0071352|FBtr0309250|FBtr0343319|FBtr0114594 9093610|9093610|9093610|9093610|9093610|9093610|9093610 9094242|9094242|9094242|9094242|9094242|9094242|9094242 GGCAGCTA 8mer-A1 dme-miR-980-3p X - 9093715 9093775 3'utr CG7766 FlyBase G49592.1 AGATTTGTTTTTTGTACTGGCAGCTATTTTACAGCGACAACACTTTCGATTGTTTTAACTT 26 9093758 0.880291063 5 25 244 0.945945946 1.544068044 0.054054054 0.307692308 0.513513514 26 2 0 35 X:9093715-9093775 8 29 6335 FBgn0030087 549.9233333 13.47666667 20.56666667 0.052734624 2.151867425 1.410048622 1 1 1 0.01 dme-miR-1003-3p 7mer-A1 TGTGAGA X 9108152 9108158 + X_9108152_9108158_+ 0.598382561 0.598382561 0.598382561 0 Arfrp1 FBtr0071293 9107931 9108354 X + 9108141 9108167 3'utr Arfrp1 FlyBase G59997.1 TGTTAGAAAGCTGTGAGACTTCTGCAT 6 9108154 0.75587212 2 6 31 1 1 0.3 0.333333333 0.6 6 0 0 10 X:9108141-9108167 7 Arfrp1 FBtr0071293 9107931 9108354 TGTGAGA 7mer-A1 dme-miR-1003-3p X + 9108103 9108166 3'utr Arfrp1 FlyBase G45368.1 TTTTCGGTTAACTACTGCTGAGAAAATGAGGAAAACAATGTTAGAAAGCTGTGAGACTTCTGCA 6 9108154 0.949285294 3 6 29 1 0.903089987 0 0.166666667 0.375 6 0 0 8 X:9108103-9108166 7 5 6336 FBgn0030088 100.3333333 11.22666667 17.08666667 0.049833887 0.445368171 0.292625829 -2 -2 -2 0.01 dme-miR-33-5p 6mer3-8 CAATGC X 9108212 9108217 + X_9108212_9108217_+ 1 1 1 0 Arfrp1 FBtr0071293 9107931 9108354 X + 9108183 9108236 3'utr Arfrp1 FlyBase G59998.1 AAATACTATTGTTAGAATAACAAAGAACGCAATGCTTATTAGCCAATTAAGTGC 7 9108221 0.965246807 5 7 38 1 0.84509804 0.285714286 0 0 7 0 0 7 X:9108183-9108236 6 Arfrp1 FBtr0071293 9107931 9108354 CAATGC 6mer3-8 dme-miR-33-5p X + 9108183 9108227 3'utr Arfrp1 FlyBase G45369.1 AAATACTATTGTTAGAATAACAAAGAACGCAATGCTTATTAGCCA 5 9108221 0.950370939 3 5 22 1 0.84509804 0.714285714 0.4 0.571428571 5 0 0 7 X:9108183-9108227 6 5.5 6337 FBgn0030088 100.3333333 11.22666667 17.08666667 0.054817276 0.489904988 0.321888412 -9 -9 -9 0.01 dme-miR-14-3p 6mer2-7 AGACTG X 9116512 9116517 + X_9116512_9116517_+ 1 1 1 0 AP-1gamma FBtr0071298|FBtr0071294|FBtr0112965|FBtr0333808|FBtr0309254|FBtr0071296|FBtr0071297|FBtr0071295|FBtr0309255 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117739|9117739|9117739|9117741|9117741|9117739|9117739|9117739|9117744 X + 9116487 9116526 5'utr AP-1gamma FlyBase G60010.1 TCGGCGCACAGCGTTGTTCAGACTCAGACTGTTTGTTTTT 10 9116518 0.98424626 6 9 85 0.916666667 1.041392685 0.583333333 0.2 0.333333333 10 1 0 11 X:9116487-9116526 6 AP-1gamma FBtr0333808|FBtr0112965|FBtr0071294|FBtr0071298|FBtr0071295|FBtr0309255|FBtr0071297|FBtr0071296|FBtr0309254 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117741|9117739|9117739|9117739|9117739|9117744|9117739|9117739|9117741 AGACTG 6mer2-7 dme-miR-14-3p X + 9116457 9116523 5'utr AP-1gamma FlyBase G45377.1 AATCGCATCTAGATCAGAGCATTTTCCAAATCGGCGCACAGCGTTGTTCAGACTCAGACTGTTTGTT 8 9116518 0.982334466 4 8 57 1 1 0.6 0.25 0.4 8 0 0 10 X:9116457-9116523 6 8 6338 FBgn0030089 1732.843333 43.93 67.95333333 0.00461669 0.182107899 0.117727852 -6 -6 -6 0.01 dme-miR-184-3p 6mer2-7 CCGTCC X 9117048 9117053 + X_9117048_9117053_+ 1 1 1 0 AP-1gamma FBtr0071298|FBtr0071294|FBtr0112965|FBtr0333808|FBtr0309254|FBtr0071296|FBtr0071297|FBtr0071295|FBtr0309255 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117739|9117739|9117739|9117741|9117741|9117739|9117739|9117739|9117744 X + 9117032 9117087 5'utr AP-1gamma FlyBase G60015.1 TAATTGTTTTTTTGTCCCGTCCTGAGACTCTTTGATCGGTTCCCGGCTTCTGTGGG 29 9117054 0.834023407 9 27 246 0.916666667 1.51851394 0.388888889 0.172413793 0.333333333 29 3 0 33 X:9117032-9117087 6 AP-1gamma FBtr0333808|FBtr0112965|FBtr0071294|FBtr0071298|FBtr0071295|FBtr0309255|FBtr0071297|FBtr0071296|FBtr0309254 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117741|9117739|9117739|9117739|9117739|9117744|9117739|9117739|9117741 CCGTCC 6mer2-7 dme-miR-184-3p X + 9117033 9117106 5'utr AP-1gamma FlyBase G45380.1 AATTGTTTTTTTGTCCCGTCCTGAGACTCTTTGATCGGTTCCCGGCTTCTGTGGGCCAGCCCCTGATATTCCTT 24 9117054 0.986595538 7 23 199 0.967741935 1.477121255 0.193548387 0.25 0.419354839 24 1 0 30 X:9117033-9117106 6 22 6339 FBgn0030089 1732.843333 43.93 67.95333333 0.012695897 0.500796722 0.323751594 -6 -6 -6 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA X 9117249 9117256 + X_9117249_9117256_+ 0.500120318 0.500120318 0.500120318 0 AP-1gamma FBtr0071298|FBtr0071294|FBtr0112965|FBtr0333808|FBtr0309254|FBtr0071296|FBtr0071297|FBtr0071295|FBtr0309255 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117739|9117739|9117739|9117741|9117741|9117739|9117739|9117739|9117744 X + 9117221 9117286 5'utr AP-1gamma FlyBase G60016.1 ATGATGTATTGTTATTTCCTGTGCGCACGTACTTAAAGCGGAAAATCAGCAGCAACCAGAGAAAGT 53 9117236 0.993922077 10 35 449 0.661016949 1.113943352 0.322033898 0.094339623 0.186440678 53 18 2 39 X:9117221-9117286 8 AP-1gamma FBtr0333808|FBtr0112965|FBtr0071294|FBtr0071298|FBtr0071295|FBtr0309255|FBtr0071297|FBtr0071296|FBtr0309254 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117741|9117739|9117739|9117739|9117739|9117744|9117739|9117739|9117741 GTACTTAA 8mer-A1 dme-miR-252-5p X + 9117223 9117269 5'utr AP-1gamma FlyBase G45381.1 GATGTATTGTTATTTCCTGTGCGCACGTACTTAAAGCGGAAAATCAG 40 9117236 0.860504341 8 26 322 0.656716418 1.342422681 0.447761194 0.45 0.671641791 40 22 1 44 X:9117223-9117269 8 45.5 6340 FBgn0030089 1732.843333 43.93 67.95333333 0.026257423 1.035738675 0.669577161 13 13 13 0.01 dme-miR-2a-2-5p 8mer-A1 TGATGAGA X 9117456 9117463 + X_9117456_9117463_+ 0.601217767 0.601217764 0.601217766 0 AP-1gamma FBtr0071298|FBtr0071294|FBtr0112965|FBtr0333808|FBtr0309254|FBtr0071296|FBtr0071297|FBtr0071295|FBtr0309255 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117739|9117739|9117739|9117741|9117741|9117739|9117739|9117739|9117744 X + 9117418 9117507 5'utr AP-1gamma FlyBase G60018.1 TTAGTTGCCGTCGCCGAGATGAGATGAGATGATGATGATGATGAGACGATGGATATGGAAATGACGATGATGATGATGGGGGGCATCGAG 17 9117467 0.861172467 8 15 74 0.833333333 1.176091259 0.5 0.058823529 0.111111111 17 3 0 15 X:9117418-9117507 8 AP-1gamma FBtr0333808|FBtr0112965|FBtr0071294|FBtr0071298|FBtr0071295|FBtr0309255|FBtr0071297|FBtr0071296|FBtr0309254 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117741|9117739|9117739|9117739|9117739|9117744|9117739|9117739|9117741 TGATGAGA 8mer-A1 dme-miR-2a-2-5p X + 9117388 9117486 5'utr AP-1gamma FlyBase G45382.1 GGACGCAGCTTAGAACTATATATTAACTGATTAGTTGCCGTCGCCGAGATGAGATGAGATGATGATGATGATGAGACGATGGATATGGAAATGACGATG 12 9117459 0.965962931 6 11 63 1 1.255272505 0.555555556 0.333333333 0.555555556 12 0 0 18 X:9117388-9117486 8 8 6341 FBgn0030089 1732.843333 43.93 67.95333333 0.00461669 0.182107899 0.117727852 -11 -3 -7 0.01 dme-miR-980-3p 6mer2-7 GCAGCT X 9117570 9117575 + X_9117570_9117575_+ 0.999999994 1 0.999999997 0 AP-1gamma FBtr0071298|FBtr0071294|FBtr0112965|FBtr0333808|FBtr0309254|FBtr0071296|FBtr0071297|FBtr0071295|FBtr0309255 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117739|9117739|9117739|9117741|9117741|9117739|9117739|9117739|9117744 X + 9117547 9117627 5'utr AP-1gamma FlyBase G60019.1 TATTACGATTATAAATGAATTGCGCAGCTGTATGAGAAGGAAAGAGAGGGAGAGAGATAAGAAAATAATAACATTAACATA 78 9117567 0.91955567 9 71 297 0.925531915 1.337459261 0.319148936 0.153846154 0.29787234 78 4 3 87 X:9117547-9117627 6 AP-1gamma FBtr0333808|FBtr0112965|FBtr0071294|FBtr0071298|FBtr0071295|FBtr0309255|FBtr0071297|FBtr0071296|FBtr0309254 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117741|9117739|9117739|9117739|9117739|9117744|9117739|9117739|9117741 GCAGCT 6mer2-7 dme-miR-980-3p X + 9117553 9117628 5'utr AP-1gamma FlyBase G45383.1 GATTATAAATGAATTGCGCAGCTGTATGAGAAGGAAAGAGAGGGAGAGAGATAAGAAAATAATAACATTAACATAT 48 9117567 0.884982527 8 45 167 0.931506849 1.832508913 0.328767123 0.416666667 0.616438356 48 5 0 68 X:9117553-9117628 6 32 6342 FBgn0030089 1732.843333 43.93 67.95333333 0.018466759 0.728431596 0.47091141 3 3 3 0.01 dme-miR-184-5p 7mer-A1 GATAAGA X 9117602 9117608 + X_9117602_9117608_+ 0.782911824 0.782911824 0.782911824 0 AP-1gamma FBtr0071298|FBtr0071294|FBtr0112965|FBtr0333808|FBtr0309254|FBtr0071296|FBtr0071297|FBtr0071295|FBtr0309255 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117739|9117739|9117739|9117741|9117741|9117739|9117739|9117739|9117744 X + 9117547 9117627 5'utr AP-1gamma FlyBase G60019.1 TATTACGATTATAAATGAATTGCGCAGCTGTATGAGAAGGAAAGAGAGGGAGAGAGATAAGAAAATAATAACATTAACATA 78 9117604 0.91955567 9 71 297 0.925531915 1.337459261 0.319148936 0.153846154 0.29787234 78 4 3 87 X:9117547-9117627 7 AP-1gamma FBtr0333808|FBtr0112965|FBtr0071294|FBtr0071298|FBtr0071295|FBtr0309255|FBtr0071297|FBtr0071296|FBtr0309254 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117741|9117739|9117739|9117739|9117739|9117744|9117739|9117739|9117741 GATAAGA 7mer-A1 dme-miR-184-5p X + 9117553 9117628 5'utr AP-1gamma FlyBase G45383.1 GATTATAAATGAATTGCGCAGCTGTATGAGAAGGAAAGAGAGGGAGAGAGATAAGAAAATAATAACATTAACATAT 48 9117604 0.884982527 8 45 167 0.931506849 1.832508913 0.328767123 0.416666667 0.616438356 48 5 0 68 X:9117553-9117628 7 27.5 6343 FBgn0030089 1732.843333 43.93 67.95333333 0.015869871 0.625995903 0.404689493 -2 -2 -2 0.01 dme-miR-2b-2-5p 6mer3-8 TTGAAG X 9147700 9147705 + X_9147700_9147705_+ 1 1 1 0 CG7065 FBtr0071299 9147622 9147894 X + 9147682 9147742 3'utr CG7065 FlyBase G60030.1 AAACGAGAATAACGCCCTTTGAAGTGCCCGTGTATCTGCTAGCTGGCAAGTGATTTTTATT 9 9147706 0.986511059 5 8 68 0.9 0.954242509 0.2 0.111111111 0.2 9 1 0 9 X:9147682-9147742 6 CG7065 FBtr0071299 9147622 9147894 TTGAAG 6mer3-8 dme-miR-2b-2-5p X + 9147692 9147738 3'utr CG7065 FlyBase G45390.1 AACGCCCTTTGAAGTGCCCGTGTATCTGCTAGCTGGCAAGTGATTTT 8 9147706 0.921057822 3 8 56 1 1 0 0.25 0.4 8 0 0 10 X:9147692-9147738 6 5 6344 FBgn0030091 566.8933333 15.99 24.48666667 0.008820001 0.312695435 0.204192758 -6 -6 -6 0.01 dme-miR-1008-3p 6mer3-8 AGCTGT X 9151749 9151754 + X_9151749_9151754_+ 1 1 1 0 dalao FBtr0071300 9151671 9151976 X + 9151718 9151802 3'utr dalao FlyBase G60039.1 ATATATGAATCGATCCCTGGTGTTGTAACATAGCTGTCCCCTCCCGGAACTTCCGGAAGGCAAACAACCGGAATGCTCTTAACTT 26 9151748 0.946513453 9 23 153 0.85 1.531478917 0.1 0.384615385 0.6 26 6 0 34 X:9151718-9151802 6 dalao FBtr0071300 9151671 9151976 AGCTGT 6mer3-8 dme-miR-1008-3p X + 9151723 9151768 3'utr dalao FlyBase G45394.1 TGAATCGATCCCTGGTGTTGTAACATAGCTGTCCCCTCCCGGAACT 5 9151740 0.984429879 4 4 29 0.5 0.602059991 0.125 0.2 0.5 5 4 0 4 X:9151723-9151768 6 9 6345 FBgn0030093 788.6633333 35.47 53.86 0.011411713 0.253735551 0.167099889 1 9 5 0.01 dme-miR-277-3p 7mer-m8 TGCATTT X 9153073 9153079 - X_9153073_9153079_- 0.620204266 0.620204266 0.620204266 0 His3.3B FBtr0340343 9152521 9154111 X - 9152946 9153138 3'utr His3.3B FlyBase G65891.1 ACATAACGAAGGGATGGGCGTGACAGAGTTAGTTGATTAAATAAGATTTTAGATTTACATGCATTTTATACGTTTAGGCGGACGATAGAAGATGATTCTTCTTCGGGAGATGAAAAAAAGATATAAAGATGATTCAGCAATCAGATTAACTTACACATCTATAGATTTGGAAGAGCATCGAATAAAAATAACC 172 9153073 0.848434979 32 152 1447 0.905472637 1.658011397 0.164179104 0.156976744 0.278606965 172 16 3 182 X:9152946-9153138 7 His3.3B FBtr0340343 9152521 9154111 TGCATTT 7mer-m8 dme-miR-277-3p X - 9152949 9153134 3'utr His3.3B FlyBase G49612.1 AACGAAGGGATGGGCGTGACAGAGTTAGTTGATTAAATAAGATTTTAGATTTACATGCATTTTATACGTTTAGGCGGACGATAGAAGATGATTCTTCTTCGGGAGATGAAAAAAAGATATAAAGATGATTCAGCAATCAGATTAACTTACACATCTATAGATTTGGAAGAGCATCGAATAAAAATA 117 9153073 0.803406756 34 98 925 0.847058824 1.857332496 0.147058824 0.367521368 0.564705882 117 25 1 144 X:9152949-9153134 7 92.5 6346 FBgn0004828 21818.69667 1276.286667 1948.03 0.004239483 0.072475881 0.047483868 -6 -6 -6 0.01 dme-miR-305-5p 6mer3-8 AGTACA X 9153346 9153351 - X_9153346_9153351_- 1 1 1 0 His3.3B FBtr0340343|FBtr0071345|FBtr0071347|FBtr0071346 9152521|9153236|9153236|9153236 9154111|9154111|9154111|9154111 X - 9153287 9153479 3'utr His3.3B FlyBase G65893.1 GCGGACCGCCTGGCGGTGATTCCCGGATCTCTGGATGGGCGGCGAGGGCATGGCCGTCTGGCGATGCCACTGACGGCACGCGGCTTTTATGAAGATAATATCCATATATAACACCGAAGACCGAATCGAGTACACTTAACTTTACACTTACGTATATGCATATATATACATAAATACATATATATATAAATAT 985 9153344 0.932819763 33 960 5313 0.972555746 2.151523068 0.268439108 0.150253807 0.282161235 985 25 7 1134 X:9153287-9153479 6 His3.3B FBtr0071346|FBtr0071347|FBtr0071345|FBtr0340343 9153236|9153236|9153236|9152521 9154111|9154111|9154111|9154111 AGTACA 6mer3-8 dme-miR-305-5p X - 9153290 9153496 3'utr His3.3B FlyBase G49614.1 AAGGCGGACAGACGGTTGCGGACCGCCTGGCGGTGATTCCCGGATCTCTGGATGGGCGGCGAGGGCATGGCCGTCTGGCGATGCCACTGACGGCACGCGGCTTTTATGAAGATAATATCCATATATAACACCGAAGACCGAATCGAGTACACTTAACTTTACACTTACGTATATGCATATATATACATAAATACATATATATATAAA 610 9153344 0.95625141 28 588 3164 0.971891892 2.254789687 0.28972973 0.37704918 0.589189189 610 22 4 899 X:9153290-9153496 6 646 6347 FBgn0004828 21818.69667 1276.286667 1948.03 0.029607635 0.506155879 0.33161707 -7 -7 -7 0.01 dme-miR-33-5p 8mer-m1 CAATGCAC X 9156968 9156975 - X_9156968_9156975_- 0.662435351 0.662435351 0.662435351 0 Ost48 FBtr0071344 9156927 9157007 X - 9156935 9156992 3'utr Ost48 FlyBase G65898.1 AACTCAAATGTAACACACAATGCACTAAAATAAAGTTCTCTGCAGAGAGAAACCCACA 19 9156967 0.930232969 3 19 69 1 1.361727836 0.043478261 0.210526316 0.347826087 19 0 0 23 X:9156935-9156992 8 Ost48 FBtr0071344 9156927 9157007 CAATGCAC 8mer-m1 dme-miR-33-5p X - 9156963 9156992 3'utr Ost48 FlyBase G49621.1 AACTCAAATGTAACACACAATGCACTAAAA 10 9156967 0.927262937 2 9 32 0.933333333 0.84509804 0 0.4 0.6 10 0 1 14 X:9156963-9156992 8 14 6348 FBgn0014868 1360 108.53 164.8033333 0.010294118 0.128996591 0.084949738 -8 -8 -8 0.01 dme-bantam-3p 7mer-m8 TGATCTC X 9171625 9171631 + X_9171625_9171631_+ 0.661615243 0.661615243 0.661615243 0 mei-P26 FBtr0333474|FBtr0333473|FBtr0333475 9170814|9170814|9170814 9189309|9189309|9175190 X + 9171581 9171657 3'utr mei-P26 FlyBase G60057.1 AAACCAATAACAGATGATAAACAAAATGCAACAAATACTATTTTTGATCTCTAATTTAAAAACAATTAGCGCTACTA 115 9171624 0.99202655 14 111 1231 0.965034965 1.838849091 0 0.2 0.356643357 115 4 1 138 X:9171581-9171657 7 mei-P26 FBtr0071303|FBtr0340341|FBtr0333475|FBtr0333473|FBtr0333474 9170814|9170814|9170814|9170814|9170814 9171659|9171659|9175190|9189309|9189309 TGATCTC 7mer-m8 dme-bantam-3p X + 9171604 9171643 3'utr mei-P26 FlyBase G45407.1 AAATGCAACAAATACTATTTTTGATCTCTAATTTAAAAAC 79 9171623 0.618583064 11 76 862 0.963636364 2.025305865 0 0.316455696 0.509090909 79 4 0 106 X:9171604-9171643 7 95 6349 FBgn0026206 3669.783333 46.77 72.34333333 0.025887087 2.031216592 1.313182509 1 2 1.5 0.01 dme-miR-79-3p 7mer-m8 TAGCTTT X 9171969 9171975 + X_9171969_9171975_+ 0.62020403 0.620204031 0.62020403 0 mei-P26 FBtr0333474|FBtr0333473|FBtr0333475 9170814|9170814|9170814 9189309|9189309|9175190 X + 9171948 9171998 3'utr mei-P26 FlyBase G60058.2 TATATTGTTATATCGACCGATTAGCTTTTTTGTGCATACCCTTCCAGAATC 136 9171968 0.896928082 6 135 1345 1 2.227886705 0.337278107 0.213235294 0.366863905 136 0 0 169 X:9171948-9171998 7 mei-P26 FBtr0333475|FBtr0333473|FBtr0333474 9170814|9170814|9170814 9175190|9189309|9189309 TAGCTTT 7mer-m8 dme-miR-79-3p X + 9171921 9171991 3'utr mei-P26 FlyBase G45408.1 ATGTTACTTATTATCTATATAGACATATATATTGTTATATCGACCGATTAGCTTTTTTGTGCATACCCTTC 102 9171968 0.989417039 5 102 990 1 2.176091259 0.433333333 0.37254902 0.573333333 102 0 0 150 X:9171921-9171991 7 115.5 6350 FBgn0026206 3669.783333 46.77 72.34333333 0.031473248 2.469531751 1.596553472 1 1 1 0.01 dme-miR-263a-5p 7mer-A1 TGCCATA X 9172415 9172421 + X_9172415_9172421_+ 0.782911824 0.782911824 0.782911824 0 mei-P26 FBtr0333474|FBtr0333473|FBtr0333475 9170814|9170814|9170814 9189309|9189309|9175190 X + 9172382 9172434 3'utr mei-P26 FlyBase G60061.1 ACATATATGTGAAATCCTATGACTATATGACTTTGCCATATAATATACAAAGC 12 9172413 0.992123385 6 8 96 0.714285714 1 0.071428571 0.083333333 0.214285714 12 4 0 10 X:9172382-9172434 7 mei-P26 FBtr0333475|FBtr0333473|FBtr0333474 9170814|9170814|9170814 9175190|9189309|9189309 TGCCATA 7mer-A1 dme-miR-263a-5p X + 9172371 9172430 3'utr mei-P26 FlyBase G45410.1 ATATATCTTAAACATATATGTGAAATCCTATGACTATATGACTTTGCCATATAATATACA 12 9172414 0.986068155 8 10 88 0.8125 0.812913357 0.125 0.333333333 0.5 12 2 1 13 X:9172371-9172430 7 7.5 6351 FBgn0026206 3669.783333 46.77 72.34333333 0.002043717 0.160359205 0.103672303 2 1 1.5 0.01 dme-miR-283-5p 6mer3-8 TGATAT X 9173482 9173487 + X_9173482_9173487_+ 1 0.999992249 0.999996124 5.52E-06 mei-P26 FBtr0333474|FBtr0333473|FBtr0333475 9170814|9170814|9170814 9189309|9189309|9175190 X + 9173412 9173491 3'utr mei-P26 FlyBase G60067.1 CCATACACCCATACTCATCCACACACATAAGGCATAACAACGAAACGAATCCTTTGTATTGTGAACATTATGATATCCTG 8 9173470 0.979882712 7 8 49 1 0.903089987 0.25 0 0 8 0 0 8 X:9173412-9173491 6 mei-P26 FBtr0333475|FBtr0333473|FBtr0333474 9170814|9170814|9170814 9175190|9189309|9189309 TGATAT 6mer3-8 dme-miR-283-5p X + 9173452 9173504 3'utr mei-P26 FlyBase G45415.1 CGAAACGAATCCTTTGTATTGTGAACATTATGATATCCTGTTATTTGTTAGTT 6 9173489 0.984895768 5 6 54 1 1 0 0.333333333 0.6 6 0 0 10 X:9173452-9173504 6 3 6352 FBgn0026206 3669.783333 46.77 72.34333333 0.000817487 0.064143682 0.041468921 12 -7 2.5 0.01 dme-miR-980-5p 7mer-m1 AAAAACT X 9173607 9173613 + X_9173607_9173613_+ 0.757328066 0.765586653 0.761457359 0.005839712 mei-P26 FBtr0333474|FBtr0333473|FBtr0333475 9170814|9170814|9170814 9189309|9189309|9175190 X + 9173558 9173620 3'utr mei-P26 FlyBase G60068.1 ATGTTAATCCCATCATTGGCATTTGTGTACCACAATGCGGCGCGGAGCTAAAAACTGTTTTAA 25 9173616 0.986497038 8 16 138 0.741935484 1.06069784 0.096774194 0.24 0.387096774 25 7 1 23 X:9173558-9173620 7 mei-P26 FBtr0333475|FBtr0333473|FBtr0333474 9170814|9170814|9170814 9175190|9189309|9189309 AAAAACT 7mer-m1 dme-miR-980-5p X + 9173536 9173636 3'utr mei-P26 FlyBase G45416.1 TGTTTTAAACAGCAAAAATCTTATGTTAATCCCATCATTGGCATTTGTGTACCACAATGCGGCGCGGAGCTAAAAACTGTTTTAAATCTTGTCATTTTTCT 21 9173616 0.983552774 9 18 148 0.928571429 1.414973348 0.035714286 0.285714286 0.464285714 21 2 0 26 X:9173536-9173636 7 16 6353 FBgn0026206 3669.783333 46.77 72.34333333 0.00435993 0.342099637 0.221167581 -9 -9 -9 0.01 dme-miR-277-3p 6mer3-8 TGCATT X 9174375 9174380 + X_9174375_9174380_+ 1 1 1 0 mei-P26 FBtr0333474|FBtr0333473|FBtr0333475 9170814|9170814|9170814 9189309|9189309|9175190 X + 9174360 9174394 3'utr mei-P26 FlyBase G60072.1 AAAATCTTGTCGCGCTGCATTAACTACGGAAGTAT 6 9174379 0.870581671 2 5 38 0.833333333 0.698970004 0.166666667 0 0 6 1 0 5 X:9174360-9174394 6 mei-P26 FBtr0333475|FBtr0333473|FBtr0333474 9170814|9170814|9170814 9175190|9189309|9189309 TGCATT 6mer3-8 dme-miR-277-3p X + 9174311 9174389 3'utr mei-P26 FlyBase G45424.1 TTTCCTTAAACCACCTAAACTTTCCTTTCCATTTTCGCATAAATACTTTAAAATCTTGTCGCGCTGCATTAACTACGGA 5 9174367 0.983657077 5 5 42 1 0.698970004 0 0 0 5 0 0 5 X:9174311-9174389 6 4.5 6354 FBgn0026206 3669.783333 46.77 72.34333333 0.00122623 0.096215523 0.062203382 -4 8 2 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 9174446 9174451 + X_9174446_9174451_+ 1 0.999981169 0.999990584 1.33E-05 mei-P26 FBtr0333474|FBtr0333473|FBtr0333475 9170814|9170814|9170814 9189309|9189309|9175190 X + 9174396 9174457 3'utr mei-P26 FlyBase G60073.1 AAGATGAAACATTTTGCTAAAGACAATGGAAACACTCAAATGCAAAGTATACCAAAAGAATT 24 9174445 0.880998885 5 22 97 0.923076923 1.380211242 0.153846154 0.083333333 0.153846154 24 2 0 24 X:9174396-9174457 6 mei-P26 FBtr0333475|FBtr0333473|FBtr0333474 9170814|9170814|9170814 9175190|9189309|9189309 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 9174396 9174464 3'utr mei-P26 FlyBase G45425.1 AAGATGAAACATTTTGCTAAAGACAATGGAAACACTCAAATGCAAAGTATACCAAAAGAATTGTTTTTA 24 9174445 0.908280019 6 23 102 0.923076923 1.556302501 0.128205128 0.333333333 0.58974359 24 3 0 36 X:9174396-9174464 6 15 6355 FBgn0026206 3669.783333 46.77 72.34333333 0.004087435 0.320718409 0.207344607 1 1 1 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 9176121 9176127 + X_9176121_9176127_+ 0.823349562 0.823349559 0.823349561 0 mei-P26 FBtr0333474|FBtr0333473 9170814|9170814 9189309|9189309 X + 9176086 9176139 3'utr mei-P26 FlyBase G60078.1 GCGAATGAAGGACGAACCTTTTGATAAAGATGCTGCCAAAGATTTTTTATACAA 12 9176118 0.976855653 5 12 77 1 1.204119983 0.0625 0.25 0.4375 12 0 0 16 X:9176086-9176139 7 mei-P26 FBtr0333473|FBtr0333474 9170814|9170814 9189309|9189309 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X + 9176091 9176140 3'utr mei-P26 FlyBase G45428.1 TGAAGGACGAACCTTTTGATAAAGATGCTGCCAAAGATTTTTTATACAAT 11 9176119 0.986456592 2 9 86 0.846153846 1.041392685 0 0.181818182 0.307692308 11 2 0 11 X:9176091-9176140 7 11 6356 FBgn0026206 3669.783333 46.77 72.34333333 0.002997452 0.2351935 0.152052712 3 2 2.5 0.01 dme-miR-317-3p 6mer3-8 TGTGTT X 9194835 9194840 - X_9194835_9194840_- 1 0.999816205 0.999908103 0.000129966 CG12118 FBtr0071340|FBtr0071339 9194748|9194748 9194918|9194918 X - 9194781 9194901 3'utr CG12118 FlyBase G65906.1 GTGGTTGCCATTGGAGTTGGACTCCAAATGATGAAGCCGTAGCCTTTTAAGCGATGATGACTGTGTTAACTGTTTAGGTTTCCTGTTCCGACACTGTATATAGCCGACAATGCTGGTGTTA 169 9194844 0.987365231 16 161 1415 0.95215311 1.997823081 0.119617225 0.189349112 0.344497608 169 9 1 199 X:9194781-9194901 6 CG12118 FBtr0071339|FBtr0071340 9194748|9194748 9194918|9194918 TGTGTT 6mer3-8 dme-miR-317-3p X - 9194821 9194862 3'utr CG12118 FlyBase G49627.2 TAGCCTTTTAAGCGATGATGACTGTGTTAACTGTTTAGGTTT 137 9194844 0.693953326 7 129 997 0.961206897 2.348304863 0.099137931 0.437956204 0.668103448 137 9 0 223 X:9194821-9194862 6 143 6357 FBgn0030101 135.7533333 13.14666667 20.01666667 1.053381132 10.87728195 7.144046628 4 4 4 0.01 dme-miR-965-3p 6mer2-7 ACGCTT X 9228908 9228913 - X_9228908_9228913_- 1 1 1 0 CG12121 FBtr0071334 9228794 9229267 X - 9228831 9228935 3'utr CG12121 FlyBase G65936.1 AATCCGCTTAACGGAATACTGAACGCTTGTGACACCCAGGCCCTATCCTTGGTTTAAGATATACATATACATATAAATAAATACACTTATGTAATTACCTATAAT 21 9228907 0.964455243 8 21 117 1 1.342422681 0.272727273 0.047619048 0.090909091 21 0 0 22 X:9228831-9228935 6 CG12121 FBtr0071334 9228794 9229267 ACGCTT 6mer2-7 dme-miR-965-3p X - 9228844 9228939 3'utr CG12121 FlyBase G49658.1 AATGAATCCGCTTAACGGAATACTGAACGCTTGTGACACCCAGGCCCTATCCTTGGTTTAAGATATACATATACATATAAATAAATACACTTATGT 17 9228908 0.975830396 5 15 96 0.875 1.021189299 0 0.294117647 0.5 17 2 1 21 X:9228844-9228939 6 14.5 6358 FBgn0030109 1482.023333 60.82 93.35 0.009783922 0.238408418 0.155329405 -6 -5 -5.5 0.01 dme-miR-277-3p 6mer3-8 TGCATT X 9229219 9229224 - X_9229219_9229224_- 1 1 1 0 CG12121 FBtr0071334 9228794 9229267 X - 9229122 9229325 stop_codon CG12121 FlyBase G65938.1 CGATGATGAGCGCGAGAACCTGATTGCAAAGCGGGAATCAAGCCATGAGTACGATTAGGCCCCATAATGGAAGCCAATTGATCTGCATCACCAATATTCCCTGCATTAGTCCGTAGTCTATAGTCCCCGGAGTCTTGGATATAATGACTCAAATTCTGAGCTAGTACTTTACCATTACTTTAATATATTTGTTTTATGTTCAGC 921 9229229 0.986824025 31 914 7907 0.991743119 2.732795698 0.160550459 0.149837134 0.281651376 921 8 1 1081 X:9229122-9229325 6 CG12121 FBtr0071334 9228794 9229267 TGCATT 6mer3-8 dme-miR-277-3p X - 9229152 9229319 stop_codon CG12121 FlyBase G49661.1 TGAGCGCGAGAACCTGATTGCAAAGCGGGAATCAAGCCATGAGTACGATTAGGCCCCATAATGGAAGCCAATTGATCTGCATCACCAATATTCCCTGCATTAGTCCGTAGTCTATAGTCCCCGGAGTCTTGGATATAATGACTCAAATTCTGAGCTAGTACTTTACCA 485 9229229 0.966428878 27 478 3880 0.986436498 2.602059991 0.144266338 0.428865979 0.658446363 485 10 1 800 X:9229152-9229319 6 581 6359 FBgn0030109 1482.023333 60.82 93.35 0.392031614 9.552778691 6.223888591 5 5 5 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 923037 923043 - X_923037_923043_- 0.801970437 0.801970437 0.801970437 0 CG3711 FBtr0343361|FBtr0343361|FBtr0343361 922887|922887|922887 924213|924213|924213 X - 922984 923061 5'utr CG3711 FlyBase G63924.1 AATTCTTGTTTCCGAAATTGTGATAAATCAGTTTATTTATGATTGCATTGTGACTATGTTTAAGCAATATTTAAGAAT 37 923044 0.987956581 7 35 319 0.933333333 1.146128036 0.244444444 0.189189189 0.333333333 37 1 2 42 X:922984-923061 7 CG3711 FBtr0343361|FBtr0343361|FBtr0343361 922887|922887|922887 924213|924213|924213 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 923031 923059 5'utr CG3711 FlyBase G48188.1 TTCTTGTTTCCGAAATTGTGATAAATCAG 20 923044 0.814829715 2 20 159 1 1.505149978 0.375 0.4 0.625 20 0 0 32 X:923031-923059 7 26 6360 FBgn0040344 266.6666667 7.813333333 11.92 0.0975 3.327645051 2.181208054 1 1 1 0.01 dme-miR-305-5p 7mer-m8 AGTACAA X 923293 923299 - X_923293_923299_- 0.643267584 0.625963125 0.634615354 0.012236129 CG3711 FBtr0331303|FBtr0343361 923166|922887 924144|924213 X - 923251 923312 5'utr CG3711 FlyBase G63926.1 ATACTAATACCCAAGTACAACTTACTAGTTGATATAGATCTAAATCTACTCGTTTTAATTGG 6 923290 0.947407874 4 6 38 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 X:923251-923312 7 CG3711 FBtr0331303|FBtr0343361 923166|922887 924144|924213 AGTACAA 7mer-m8 dme-miR-305-5p X - 923268 923313 5'utr CG3711 FlyBase G48190.1 TATACTAATACCCAAGTACAACTTACTAGTTGATATAGATCTAAAT 9 923290 0.787640993 4 7 70 0.615384615 0.903089987 0 0.333333333 0.538461538 9 5 0 8 X:923268-923313 7 7 6361 FBgn0040344 266.6666667 7.813333333 11.92 0.02625 0.895904437 0.587248322 -9 -9 -9 0.01 dme-miR-988-3p 6mer2-7 CAAGGG X 923359 923364 - X_923359_923364_- 1 1 1 0 CG3711 FBtr0331303|FBtr0343361 923166|922887 924144|924213 X - 923319 923372 5'utr CG3711 FlyBase G63927.1 TTATTTTGCAAGGGTCATAGGCTTATAGTCTCCGAAGTCCGAGGGTCTTCCCTT 11 923355 0.854067926 4 11 92 1 1.041392685 0.090909091 0 0 11 0 0 11 X:923319-923372 6 CG3711 FBtr0331303|FBtr0343361 923166|922887 924144|924213 CAAGGG 6mer2-7 dme-miR-988-3p X - 923343 923372 5'utr CG3711 FlyBase G48191.1 TTATTTTGCAAGGGTCATAGGCTTATAGTC 7 923356 0.838362812 3 7 55 1 1.113943352 0 0.428571429 0.692307692 7 0 0 13 X:923343-923372 6 7 6362 FBgn0040344 266.6666667 7.813333333 11.92 0.02625 0.895904437 0.587248322 -9 -8 -8.5 0.01 dme-bantam-3p 6mer3-8 TGATCT X 923743 923748 - X_923743_923748_- 1 1 1 0 CG3711 FBtr0331303|FBtr0343361 923166|922887 924144|924213 X - 923726 923769 5'utr CG3711 FlyBase G63928.2 TATAGGTTTTGTTAAAACACTTGATCTTTAAACCTTATAGTTGC 41 923748 0.832309161 6 38 343 0.9375 1.352182518 0.0625 0.12195122 0.25 41 2 1 45 X:923726-923769 6 CG3711 FBtr0331303|FBtr0343361 923166|922887 924144|924213 TGATCT 6mer3-8 dme-bantam-3p X - 923724 923757 5'utr CG3711 FlyBase G48192.1 TAAAACACTTGATCTTTAAACCTTATAGTTGCAG 16 923748 0.767529471 4 14 134 0.869565217 1 0.173913043 0.3125 0.52173913 16 2 1 20 X:923724-923757 6 27.5 6363 FBgn0040344 266.6666667 7.813333333 11.92 0.103125 3.519624573 2.30704698 0 0 0 0.01 dme-miR-980-5p 6mer2-7 AAAAAC X 9246098 9246103 - X_9246098_9246103_- 1 1 1 0 amx FBtr0307281|FBtr0071331 9245913|9245913 9246206|9246206 X - 9246040 9246134 3'utr amx FlyBase G65962.1 ATGCAACCATTAGGAATAGCAAGATCTTCTCAAAAACGTGTACATAATTAATTAGGAAATGTATTTTATTAATAATGCCAAAAGTTCTTTTTTGT 30 9246105 0.882177299 9 29 193 0.970588235 1.51851394 0 0.133333333 0.235294118 30 1 0 33 X:9246040-9246134 6 amx FBtr0307281|FBtr0071331 9245913|9245913 9246206|9246206 AAAAAC 6mer2-7 dme-miR-980-5p X - 9246047 9246133 3'utr amx FlyBase G49675.1 TGCAACCATTAGGAATAGCAAGATCTTCTCAAAAACGTGTACATAATTAATTAGGAAATGTATTTTATTAATAATGCCAAAAGTTCT 14 9246106 0.969540756 6 14 83 1 1.278753601 0.105263158 0.214285714 0.421052632 14 0 0 19 X:9246047-9246133 6 15 6364 FBgn0000077 117.3333333 12.09666667 18.64666667 0.127840909 1.240011022 0.804433321 2 3 2.5 0.01 dme-miR-317-3p 7mer-m8 TGTGTTC X 9254901 9254907 + X_9254901_9254907_+ 0.661615645 0.661615645 0.661615645 0 CG17754 FBtr0071315|FBtr0340122 9254354|9254354 9255031|9255802 X + 9254865 9255018 5'utr-coding CG17754 FlyBase G60111.1 AACTGCAGCTCACCTTCGCCTCGCCTCGCTCTCGTCTGTGTTCTGACATGATTCCCTGTGGTATGGCATACACCCAGAACTCACCCACTTTCCGCACCGCACACCCCAACCCAGTATTTTCCCCATAACTCTGCTCTTTTCGGCTTGAATCTAA 27 9254899 0.905039927 13 25 176 0.9375 1.477121255 0 0.185185185 0.3125 27 2 0 30 X:9254865-9255018 7 CG17754 FBtr0071315 9254354 9255031 TGTGTTC 7mer-m8 dme-miR-317-3p X + 9254866 9254933 5'utr-coding CG17754 FlyBase G45445.1 ACTGCAGCTCACCTTCGCCTCGCCTCGCTCTCGTCTGTGTTCTGACATGATTCCCTGTGGTATGGCAT 7 9254900 0.984101072 5 7 55 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 X:9254866-9254933 7 6 6365 FBgn0030114 175.6666667 7.656666667 11.80666667 0.034155598 0.783630823 0.508187465 2 1 1.5 0.01 dme-miR-8-3p 7mer-m8 CAGTATT X 9254976 9254982 + X_9254976_9254982_+ 0.661615243 0.661615243 0.661615243 0 CG17754 FBtr0071315 9254354 9255031 X + 9254865 9255018 5'utr-coding CG17754 FlyBase G60111.1 AACTGCAGCTCACCTTCGCCTCGCCTCGCTCTCGTCTGTGTTCTGACATGATTCCCTGTGGTATGGCATACACCCAGAACTCACCCACTTTCCGCACCGCACACCCCAACCCAGTATTTTCCCCATAACTCTGCTCTTTTCGGCTTGAATCTAA 27 9254983 0.905039927 13 25 176 0.9375 1.477121255 0 0.185185185 0.3125 27 2 0 30 X:9254865-9255018 7 CG17754 FBtr0071315 9254354 9255031 CAGTATT 7mer-m8 dme-miR-8-3p X + 9254952 9255016 3'utr CG17754 FlyBase G45446.1 CTTTCCGCACCGCACACCCCAACCCAGTATTTTCCCCATAACTCTGCTCTTTTCGGCTTGAATCT 10 9254983 0.956704103 3 10 56 1 1.230448921 0 0.5 0.705882353 10 0 0 17 X:9254952-9255016 7 7 6366 FBgn0030114 175.6666667 7.656666667 11.80666667 0.039848197 0.91423596 0.592885375 -7 -7 -7 0.01 dme-miR-317-3p 8mer-A1 TGTGTTCA X 9258195 9258202 + X_9258195_9258202_+ 0.631136783 0.631136783 0.631136783 0 ric8a FBtr0346166|FBtr0071317 9258082|9258082 9259202|9258670 X + 9258082 9258213 stop_codon ric8a FlyBase G60123.1 AAGCCACAAATGTATTGCGGGATCTGCTATGGCACAACTTCCAAATAGCTACCAAAAAATCACCTTAAACTCTGCATTTATTCCATAAGTTTACTGTCGAATGTAGCTTCGAATGTGTTCAAAAAGCAGATT 33 9258195 0.927909585 12 29 191 0.891891892 1.217483944 0.189189189 0.090909091 0.189189189 33 3 1 33 X:9258082-9258213 8 ric8a FBtr0071317|FBtr0346166 9258082|9258082 9258670|9259202 TGTGTTCA 8mer-A1 dme-miR-317-3p X + 9258175 9258208 3'utr ric8a FlyBase G45456.1 CTGTCGAATGTAGCTTCGAATGTGTTCAAAAAGC 10 9258195 0.676957862 4 10 66 1 1.113943352 0.153846154 0.2 0.384615385 10 0 0 13 X:9258175-9258208 8 13 6367 FBgn0028292 451.68 19.07666667 29.28333333 0.028781438 0.681460772 0.443938532 0 0 0 0.01 dme-miR-986-5p 8mer-A1 ATTCGAGA X 9258250 9258257 + X_9258250_9258257_+ 0.643566346 0.643566346 0.643566346 0 ric8a FBtr0346166|FBtr0071317 9258082|9258082 9259202|9258670 X + 9258236 9258276 3'utr ric8a FlyBase G60124.1 ATTTTATACCACATATTCGAGAACATCTCATTATAACCTAC 11 9258266 0.744928111 4 9 64 0.8125 1.113943352 0 0.454545455 0.625 11 3 0 13 X:9258236-9258276 8 ric8a FBtr0071317|FBtr0346166 9258082|9258082 9258670|9259202 ATTCGAGA 8mer-A1 dme-miR-986-5p X + 9258241 9258275 3'utr ric8a FlyBase G45457.1 ATACCACATATTCGAGAACATCTCATTATAACCTA 9 9258266 0.632791542 3 9 50 1 1.041392685 0 0.222222222 0.363636364 9 0 0 11 X:9258241-9258275 8 10 6368 FBgn0028292 451.68 19.07666667 29.28333333 0.022139568 0.524200594 0.341491178 -16 -16 -16 0.01 dme-miR-252-5p 7mer-m8 GTACTTA X 9258459 9258465 + X_9258459_9258465_+ 0.588299917 0.588299917 0.588299917 0 ric8a FBtr0346166|FBtr0071317 9258082|9258082 9259202|9258670 X + 9258436 9258479 3'utr ric8a FlyBase G60126.1 AACCATTAACCATGTAGAACGTTGTACTTATTAAGTTATTACGC 12 9258458 0.97863072 3 12 125 1 1.113943352 0 0.083333333 0.153846154 12 0 0 13 X:9258436-9258479 7 ric8a FBtr0071317|FBtr0346166 9258082|9258082 9258670|9259202 GTACTTA 7mer-m8 dme-miR-252-5p X + 9258441 9258475 3'utr ric8a FlyBase G45459.1 TTAACCATGTAGAACGTTGTACTTATTAAGTTATT 7 9258458 0.80285385 3 7 70 1 1 0 0.285714286 0.5 7 0 0 10 X:9258441-9258475 7 9.5 6369 FBgn0028292 451.68 19.07666667 29.28333333 0.021032589 0.497990564 0.324416619 1 1 1 0.01 dme-miR-317-3p 8mer-A1 TGTGTTCA X 9259075 9259082 + X_9259075_9259082_+ 0.631136783 0.631136783 0.631136783 0 ric8a FBtr0346166 9258082 9259202 X + 9259045 9259101 3'utr ric8a FlyBase G60127.1 ATATACAAGAAATCCTATCTAGAGCTTTATTGTGTTCAATTTGCTATAGCGATGATA 41 9259074 0.99074126 2 41 449 1 1.716003344 0.461538462 0.195121951 0.365384615 41 0 0 52 X:9259045-9259101 8 ric8a FBtr0346166 9258082 9259202 TGTGTTCA 8mer-A1 dme-miR-317-3p X + 9259058 9259101 3'utr ric8a FlyBase G45460.1 CCTATCTAGAGCTTTATTGTGTTCAATTTGCTATAGCGATGATA 23 9259074 0.76109212 2 22 258 0.941176471 1.028028724 0.411764706 0.347826087 0.558823529 23 0 2 32 X:9259058-9259101 8 32 6370 FBgn0028292 451.68 19.07666667 29.28333333 0.070846617 1.677441901 1.09277177 1 1 1 0.01 dme-miR-8-3p 6mer2-7 AGTATT X 9276050 9276055 - X_9276050_9276055_- 0.999979832 1 0.999989916 1.43E-05 c11.1 FBtr0343368|FBtr0071326 9275316|9275646 9276124|9276124 X - 9275997 9276084 3'utr c11.1 FlyBase G65972.1 ATGTTGTGTGTGTTTGTAAATTATGACTTAGTATTGCTCCAAGTGTGATCCCTTTGCCTCAGCAATCGTTCCCTTATTATGTTTGATA 20 9276054 0.985690846 14 20 173 1 1.322219295 0.095238095 0.05 0.095238095 20 0 0 21 X:9275997-9276084 6 c11.1 FBtr0071326|FBtr0343368 9275646|9275316 9276124|9276124 AGTATT 6mer2-7 dme-miR-8-3p X - 9275989 9276067 3'utr c11.1 FlyBase G49683.1 AAATTATGACTTAGTATTGCTCCAAGTGTGATCCCTTTGCCTCAGCAATCGTTCCCTTATTATGTTTGATATTTAACTC 22 9276051 0.663273076 13 20 189 0.925925926 1.397940009 0.074074074 0.181818182 0.333333333 22 2 0 25 X:9275989-9276067 6 15 6371 FBgn0040236 1095.22 21.73 33.33666667 0.013695878 0.690289922 0.449955004 -1 -4 -2.5 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA X 9325144 9325149 - X_9325144_9325149_- 1 1 1 0 CG34449 FBtr0308591|FBtr0343029|FBtr0343028|FBtr0112753 9324506|9324506|9324506|9324506 9331441|9327258|9327258|9327258 X - 9325083 9325153 3'utr CG34449 FlyBase G65996.1 AATTGTGCAAGGATCAAAACTTGTATAGACTATGCAGTAAGGTGCGCGACATAAGTGTCTGGAGCAGGCAG 15 9325121 0.968965714 4 14 87 1 1.230448921 0.117647059 0.066666667 0.176470588 15 0 0 17 X:9325083-9325153 6 CG34449 FBtr0343029|FBtr0308591|FBtr0343028|FBtr0112753 9324506|9324506|9324506|9324506 9327258|9331441|9327258|9327258 GTGCAA 6mer3-8 dme-miR-92b-3p X - 9325087 9325149 3'utr CG34449 FlyBase G49703.1 GTGCAAGGATCAAAACTTGTATAGACTATGCAGTAAGGTGCGCGACATAAGTGTCTGGAGCAG 12 9325121 0.970001789 3 12 71 1 1.230448921 0.294117647 0.333333333 0.529411765 12 0 0 17 X:9325087-9325149 6 4.5 6372 FBgn0085478 770.6366667 27.55 42.22 0.005839328 0.163339383 0.106584557 -28 -28 -28 0.01 dme-miR-2b-2-5p 6mer2-7 TGAAGA X 9326588 9326593 - X_9326588_9326593_- 1 1 1 0 CG34449 FBtr0308591|FBtr0343029|FBtr0343028|FBtr0112753 9324506|9324506|9324506|9324506 9331441|9327258|9327258|9327258 X - 9326520 9326640 3'utr CG34449 FlyBase G66001.1 GTTTAATGCTTTCTATATATAAATTGATCGATAACGAGAAATTAGAGTGAAGATGGAGATAAGAATATGAGATAAATTAAACACGAGCATGTGGATACAGATACAGTGCGTTTCATGGGTG 71 9326599 0.953795366 14 71 330 1 1.908485019 0.333333333 0.112676056 0.222222222 71 0 0 81 X:9326520-9326640 6 CG34449 FBtr0343029|FBtr0308591|FBtr0343028|FBtr0112753 9324506|9324506|9324506|9324506 9327258|9331441|9327258|9327258 TGAAGA 6mer2-7 dme-miR-2b-2-5p X - 9326568 9326620 3'utr CG34449 FlyBase G49708.1 AAATTGATCGATAACGAGAAATTAGAGTGAAGATGGAGATAAGAATATGAGAT 31 9326599 0.809747994 4 29 125 0.975609756 1.602059991 0.219512195 0.258064516 0.43902439 31 1 0 40 X:9326568-9326620 6 43.5 6373 FBgn0085478 770.6366667 27.55 42.22 0.056446834 1.578947368 1.030317385 6 6 6 0.01 dme-miR-14-3p 6mer3-8 AAGACT X 9357796 9357801 + X_9357796_9357801_+ 1 1 1 0 BCL7-like FBtr0071358 9357680 9358594 X + 9357745 9357806 3'utr BCL7-like FlyBase G60142.1 TTAGGTTAGCACCGACAGCACCGGACGACGAGAGAGTATCTGCCTCAGCCCAAGACTTAAGC 43 9357783 0.937316719 5 35 129 0.913043478 1.62324929 0.086956522 0.069767442 0.130434783 43 4 0 42 X:9357745-9357806 6 BCL7-like FBtr0071358 9357680 9358594 AAGACT 6mer3-8 dme-miR-14-3p X + 9357761 9357822 3'utr BCL7-like FlyBase G45470.1 AGCACCGGACGACGAGAGAGTATCTGCCTCAGCCCAAGACTTAAGCACTTCCCTTACACTAG 14 9357783 0.9657652 6 11 59 0.789473684 0.875061263 0.210526316 0.285714286 0.473684211 14 3 1 15 X:9357761-9357822 6 12 6374 FBgn0026149 221.2233333 16.18333333 24.75 0.054243826 0.741503605 0.484848485 13 13 13 0.01 dme-miR-34-5p 7mer-A1 ACTGCCA X 9358432 9358438 + X_9358432_9358438_+ 0.823349562 0.823349562 0.823349562 0 BCL7-like FBtr0071358 9357680 9358594 X + 9358376 9358454 3'utr BCL7-like FlyBase G60146.1 AACCAGTAAACCTCTTTATAGTACACTTACCAACATAAATGTGACATTAACATTTAACTGCCAGCAGGGCGCGAAAAAT 27 9358429 0.701607745 7 24 148 0.939393939 1.190331698 0.272727273 0.148148148 0.303030303 27 1 1 31 X:9358376-9358454 7 BCL7-like FBtr0071358 9357680 9358594 ACTGCCA 7mer-A1 dme-miR-34-5p X + 9358380 9358474 3'utr BCL7-like FlyBase G45474.1 AGTAAACCTCTTTATAGTACACTTACCAACATAAATGTGACATTAACATTTAACTGCCAGCAGGGCGCGAAAAATATGCAAATGTTCGCTGAAGA 15 9358429 0.969032796 6 14 84 1 1.431363764 0.444444444 0.466666667 0.703703704 15 0 0 27 X:9358380-9358474 7 15.5 6375 FBgn0026149 221.2233333 16.18333333 24.75 0.070064942 0.957775489 0.626262626 3 3 3 0.01 dme-miR-92b-3p 6mer3-8 GTGCAA X 9358810 9358815 - X_9358810_9358815_- 1 1 1 0 mgl FBtr0343369 9358494 9360313 X - 9358791 9358937 3'utr mgl FlyBase G66012.1 ATATATAAATATTTTATTTTTTAATTATATCATCGATTTATGAATTGTATTATGATTTATGATTTATCTTTCTCTTCGAAAGTCGAAATGTGTGTGCATTTTTTTTTTCATTTTCGTTCTCTGTGCAAAATCTGTGCTTCCCTTCAT 54 9358806 0.985338275 19 48 562 0.897058824 1.484299839 0.382352941 0.203703704 0.367647059 54 6 1 61 X:9358791-9358937 6 mgl FBtr0343369 9358494 9360313 GTGCAA 6mer3-8 dme-miR-92b-3p X - 9358774 9358864 3'utr mgl FlyBase G49711.1 CTTCGAAAGTCGAAATGTGTGTGCATTTTTTTTTTCATTTTCGTTCTCTGTGCAAAATCTGTGCTTCCCTTCATTTAAGCGTGTTTTAGCA 39 9358806 0.989924429 13 37 365 0.962962963 1.716003344 0.240740741 0.307692308 0.5 39 2 0 52 X:9358774-9358864 6 36.5 6376 FBgn0261260 1607.083333 11.89333333 18.17 0.022711952 3.068946188 2.008805724 -9 -9 -9 0.01 dme-miR-988-3p 6mer3-8 ACAAGG X 9359506 9359511 - X_9359506_9359511_- 1 1 1 0 mgl FBtr0343369 9358494 9360313 X - 9359452 9359524 3'utr mgl FlyBase G66015.1 TCTATATGTATACACAAGGCAATTAGGGGACGATTCCCAGCTAGGATTTCTATATATTTTTCTAAAAAATAAC 11 9359502 0.967031359 7 9 54 1 1.146128036 0 0.272727273 0.428571429 11 0 0 14 X:9359452-9359524 6 mgl FBtr0343369 9358494 9360313 ACAAGG 6mer3-8 dme-miR-988-3p X - 9359493 9359526 3'utr mgl FlyBase G49712.1 TATCTATATGTATACACAAGGCAATTAGGGGACG 5 9359501 0.831925678 2 4 21 0.857142857 0.77815125 0 0.2 0.428571429 5 1 0 6 X:9359493-9359526 6 5.5 6377 FBgn0261260 1607.083333 11.89333333 18.17 0.003422349 0.462443946 0.302696753 -9 -10 -9.5 0.01 dme-miR-282-5p 6mer2-7 GAGGCT X 939244 939249 + X_939244_939249_+ 1 1 1 0 CG32815 FBtr0307181|FBtr0345512 938011|938011 939424|939424 X + 939220 939259 3'utr CG32815 FlyBase G57881.1 TACAGAGTAAGTTACGCAAAGTATGAGGCTTGCATTTACA 13 939244 0.852187287 3 13 73 1 1.204119983 0 0.153846154 0.3125 13 0 0 16 X:939220-939259 6 CG32815 FBtr0345512|FBtr0307181 938011|938011 939424|939424 GAGGCT 6mer2-7 dme-miR-282-5p X + 939228 939254 3'utr CG32815 FlyBase G43788.1 AAGTTACGCAAAGTATGAGGCTTGCAT 5 939243 0.657457466 2 5 23 1 0.903089987 0 0.6 0.75 5 0 0 8 X:939228-939254 6 9 6378 FBgn0052815 22.11333333 0.906666667 1.36 0.406994272 9.926470588 6.617647059 0 1 0.5 0.01 dme-miR-79-3p 7mer-m8 TAGCTTT X 939309 939315 - X_939309_939315_- 0.620204031 0.620203691 0.620203861 2.12E-07 CG3704 FBtr0070188 939168 939463 X - 939277 939368 3'utr CG3704 FlyBase G63941.1 GTGTGTTCGTCACTTGCACCTCCGATATTTGGTTTGTATATATGGACTTAGTTTAGCTTTGCAAATTAGTGATAACATATACATATGGAGGA 43 939303 0.924611062 12 41 418 0.98245614 1.748188027 0.140350877 0.186046512 0.385964912 43 1 0 56 X:939277-939368 7 CG3704 FBtr0070188 939168 939463 TAGCTTT 7mer-m8 dme-miR-79-3p X - 939255 939385 3'utr CG3704 FlyBase G48199.1 AAAACATTCAATATAGTGTGTGTTCGTCACTTGCACCTCCGATATTTGGTTTGTATATATGGACTTAGTTTAGCTTTGCAAATTAGTGATAACATATACATATGGAGGATATATCCCGCTCGTAAATGTAA 44 939303 0.98851116 16 43 391 0.983870968 1.785329835 0.209677419 0.295454545 0.5 44 1 0 61 X:939255-939385 7 29 6379 FBgn0040346 168.8866667 13.69666667 21.07 0.171712786 2.11730348 1.376364499 -12 -12 -12 0.01 dme-miR-986-5p 6mer2-7 TTCGAG X 939417 939422 - X_939417_939422_- 1 1 1 0 CG3704 FBtr0070188 939168 939463 X - 939412 939465 stop_codon CG3704 FlyBase G63942.1 AAATGGGCGGATTGTGATCCTCGATGGCTATGGATTTCGTGATTTCGAGTTTTC 84 939441 0.76280874 11 81 720 0.981132075 2.017033339 0.528301887 0.226190476 0.386792453 84 2 0 104 X:939412-939465 6 CG3704 FBtr0070188 939168 939463 TTCGAG 6mer2-7 dme-miR-986-5p X - 939412 939472 stop_codon CG3704 FlyBase G48200.1 CAGCCGTAAATGGGCGGATTGTGATCCTCGATGGCTATGGATTTCGTGATTTCGAGTTTTC 61 939441 0.912546469 10 60 499 0.989130435 1.959041392 0.52173913 0.442622951 0.630434783 61 1 0 91 X:939412-939472 6 31.5 6380 FBgn0040346 168.8866667 13.69666667 21.07 0.186515612 2.299829642 1.495016611 19 19 19 0.01 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 942565 942570 + X_942565_942570_+ 0.955109681 0.983325984 0.969217832 0.019951937 mus81 FBtr0070170|FBtr0070170|FBtr0070170 942473|942473|942473 943229|943229|943229 X + 942519 942614 3'utr mus81 FlyBase G57884.1 GAGTTTATACATAAGTGAGAGAGAGAATACGTTGGACATTGAATAGTGTGATCTAGTCTAAGCCAAAAAATGTACAAGTCAGCCGCCCTTAGATGT 264 942551 0.751229806 15 256 1614 0.969491525 2.155336037 0.122033898 0.117870722 0.213559322 263 8 1 286 X:942519-942614 6 mus81 FBtr0070170|FBtr0070170|FBtr0070170 942473|942473|942473 943229|943229|943229 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X + 942482 942600 3'utr mus81 FlyBase G43791.1 AATTGATTTTATGGGACATATCTAAGGTTATATACACGAGTTTATACATAAGTGAGAGAGAGAATACGTTGGACATTGAATAGTGTGATCTAGTCTAAGCCAAAAAATGTACAAGTCAG 203 942551 0.976842124 16 195 1264 0.950331126 2.156851901 0.132450331 0.36453202 0.572847682 203 14 1 287 X:942482-942600 6 99 6381 FBgn0040347 59.78 3.366666667 5.13 1.656072265 29.40594059 19.29824561 14 14 14 0.01 dme-miR-2b-2-5p 7mer-m8 TTGAAGA X 943166 943172 + X_943166_943172_+ 0.631525999 0.631525999 0.631525999 0 mus81 FBtr0070170 942473 943229 X + 943149 943196 3'utr mus81 FlyBase G57886.1 AACTATAAAATGAAGATTTGAAGATGTAAAAGGCTAGTGCTTCAAACT 13 943189 0.965998489 6 13 72 1 1.322219295 0 0.384615385 0.619047619 13 0 0 21 X:943149-943196 7 mus81 FBtr0070170 942473 943229 TTGAAGA 7mer-m8 dme-miR-2b-2-5p X + 943155 943195 3'utr mus81 FlyBase G43794.1 AAAATGAAGATTTGAAGATGTAAAAGGCTAGTGCTTCAAAC 11 943189 0.96563723 5 9 66 0.857142857 0.77815125 0 0.181818182 0.357142857 11 1 1 12 X:943155-943195 7 12 6382 FBgn0040347 59.78 3.366666667 5.13 0.200736032 3.564356436 2.339181287 -23 -23 -23 0.01 dme-miR-2a-2-5p 6mer3-8 TGATGA X 9551195 9551200 - X_9551195_9551200_- 1 1 1 0 l(1)G0320 FBtr0343412 9551138 9551938 X - 9551171 9551297 3'utr l(1)G0320 FlyBase G66060.1 TTCTGATTTGGAGTGTATCATTCTTTTTCTGTTAAGACCAAAATATGTTGAAGTGAGTTTTTTTTTTAGCTAGAGAAGTCGCAGAAAGTCAGTCGACTGATGAATAATGAATAGATTTTCTTACAAC 74 9551205 0.864182957 17 71 409 0.955555556 1.457377197 0.1 0.202702703 0.344444444 74 2 2 86 X:9551171-9551297 6 l(1)G0320 FBtr0343412 9551138 9551938 TGATGA 6mer3-8 dme-miR-2a-2-5p X - 9551163 9551294 3'utr l(1)G0320 FlyBase G49732.1 TGATTTGGAGTGTATCATTCTTTTTCTGTTAAGACCAAAATATGTTGAAGTGAGTTTTTTTTTTAGCTAGAGAAGTCGCAGAAAGTCAGTCGACTGATGAATAATGAATAGATTTTCTTACAACAAAACAAA 47 9551205 0.95675495 12 45 224 0.971428571 1.832508913 0.128571429 0.340425532 0.557142857 47 2 0 68 X:9551163-9551294 6 44 6383 FBgn0028327 1065.626667 69.58 106.2833333 0.041290258 0.632365622 0.413987769 5 5 5 0.01 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 9554914 9554919 + X_9554914_9554919_+ 1 1 1 0 RpS28b FBtr0343411 9554906 9555661 X + 9554879 9554928 stop_codon RpS28b FlyBase G60150.1 CCGAACGTGAAGCCAGGAGGCTGCGCTAATTGGCGACCAAACTCGAGAAG 10 9554908 0.700981105 3 10 29 1 1 0.3 0 0 10 0 0 10 X:9554879-9554928 6 RpS28b FBtr0071360|FBtr0343411 9554906|9554906 9555209|9555661 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 9554881 9554914 stop_codon RpS28b FlyBase G45479.1 GAACGTGAAGCCAGGAGGCTGCGCTAATTGGCGA 5 9554908 0.916423462 2 4 14 0.857142857 0.77815125 0.571428571 0.2 0.428571429 5 1 0 6 X:9554881-9554914 1 5.5 6384 FBgn0030136 12486.48 3215.44 4890.35 0.000440476 0.001710497 0.001124664 6 6 6 0.01 dme-miR-995-5p 6mer3-8 AATTCG X 9555131 9555136 + X_9555131_9555136_+ 0.999990257 1 0.999995129 6.86E-06 RpS28b FBtr0343411 9554906 9555661 X + 9555043 9555203 3'utr RpS28b FlyBase G60151.2 TTTTTTTCGCGGAGAAGAAGAAGCGGATGGCAAGAAATCCGAACGAGGCTGCTGCATATTCGTTATAAACAAATGAAAATACACACCTAATTCGCCAGAAAATCAGCAAAAATGTGTTTTAAATAAATCTCGAGAGCATTGGACCGCCTTTGTACGAAAAG 79 9555132 0.876176712 24 68 381 0.928571429 1.959041392 0.12244898 0.202531646 0.357142857 79 7 0 91 X:9555043-9555203 6 RpS28b FBtr0071360|FBtr0343411 9554906|9554906 9555209|9555661 AATTCG 6mer3-8 dme-miR-995-5p X + 9555110 9555149 3'utr RpS28b FlyBase G45481.2 AACAAATGAAAATACACACCTAATTCGCCAGAAAATCAGC 11 9555133 0.925240056 2 10 38 0.928571429 1.113943352 0.071428571 0.272727273 0.428571429 11 1 0 13 X:9555110-9555149 6 14 6385 FBgn0030136 12486.48 3215.44 4890.35 0.001121213 0.004353992 0.002862781 -1 -2 -1.5 0.01 dme-miR-1012-3p 6mer3-8 TTGACT X 9555679 9555684 - X_9555679_9555684_- 1 1 1 0 CG15317 FBtr0071371 9555605 9555781 X - 9555634 9555707 3'utr CG15317 FlyBase G66070.1 TTATATATTAACTAACTGAGCTATTGACTTTTATTATAAAAATGTTACGTATATTTTCTGTGCAGCTCCAGCAG 179 9555677 0.8096055 11 177 1726 0.99122807 2.354108439 0.171052632 0.189944134 0.364035088 179 2 0 226 X:9555634-9555707 6 CG15317 FBtr0071371 9555605 9555781 TTGACT 6mer3-8 dme-miR-1012-3p X - 9555662 9555701 3'utr CG15317 FlyBase G49742.1 ATTAACTAACTGAGCTATTGACTTTTATTATAAAAATGTT 125 9555677 0.613556923 5 124 1201 0.989189189 2.26245109 0.259459459 0.368 0.572972973 125 2 0 183 X:9555662-9555701 6 148 6386 FBgn0030137 41 6.273333333 9.553333333 3.609756098 23.59192349 15.49197488 -7 -7 -7 0.01 dme-miR-190-5p 6mer3-8 ACATAT X 9555749 9555754 - X_9555749_9555754_- 1 1 1 0 CG15317 FBtr0071371 9555605 9555781 X - 9555724 9555848 stop_codon CG15317 FlyBase G66071.1 AGAAGCACGCATTACCCTTGGATTGGCCAAAATAGAGAGACTGTCCAGTTTTCCGCTGACTTTGTAGGGAAAATTAGGCTTAAGGAATATAGAAACATATGCACCTCAGTGGTTTTAAACCATAA 50 9555749 0.89043067 16 50 288 1 1.785329835 0.098360656 0.2 0.344262295 50 0 0 61 X:9555724-9555848 6 CG15317 FBtr0071371 9555605 9555781 ACATAT 6mer3-8 dme-miR-190-5p X - 9555721 9555804 stop_codon CG15317 FlyBase G49743.1 CCAGTTTTCCGCTGACTTTGTAGGGAAAATTAGGCTTAAGGAATATAGAAACATATGCACCTCAGTGGTTTTAAACCATAATTT 28 9555749 0.847130608 8 26 177 0.975609756 1.602059991 0.146341463 0.321428571 0.536585366 28 1 0 40 X:9555721-9555804 6 17 6387 FBgn0030137 41 6.273333333 9.553333333 0.414634146 2.709883103 1.779483601 -5 -5 -5 0.01 dme-miR-252-5p 8mer-A1 GTACTTAA X 9571917 9571924 - X_9571917_9571924_- 0.500120318 0.500120318 0.500120318 0 CG32699 FBtr0110850 9571535 9573007 X - 9571858 9571948 3'utr CG32699 FlyBase G66082.1 GATCTAAACGACAGAGCACAGCCTGTACTTAAGTCAAGCCATCTTGGGCACACCCCAACCTCTCACACAGTCTGTTCTAAATATGTTATAA 21 9571925 0.98101319 4 20 108 0.961538462 1.096910013 0.230769231 0.19047619 0.346153846 21 0 1 25 X:9571858-9571948 8 CG32699 FBtr0110850 9571535 9573007 GTACTTAA 8mer-A1 dme-miR-252-5p X - 9571899 9571942 3'utr CG32699 FlyBase G49748.1 AACGACAGAGCACAGCCTGTACTTAAGTCAAGCCATCTTGGGCA 16 9571925 0.974578716 2 16 66 1 1.380211242 0.083333333 0.3125 0.541666667 16 0 0 24 X:9571899-9571942 8 16.5 6388 FBgn0052699 2538.573333 91.48333333 141.3333333 0.006499714 0.180360721 0.116745283 1 1 1 0.01 dme-miR-282-5p 6mer3-8 AGAGGC X 9572584 9572589 - X_9572584_9572589_- 1 1 1 0 CG32699 FBtr0110850 9571535 9573007 X - 9572571 9572625 3'utr CG32699 FlyBase G66085.1 ACTTAGAGGATATATAAACATGTATGTATCTCATTTAGAGGCAGGCAAATCAAAC 68 9572601 0.702815361 8 65 557 0.963414634 1.596597096 0.06097561 0.205882353 0.341463415 68 2 1 79 X:9572571-9572625 6 CG32699 FBtr0110850 9571535 9573007 AGAGGC 6mer3-8 dme-miR-282-5p X - 9572576 9572628 3'utr CG32699 FlyBase G49751.1 AAAACTTAGAGGATATATAAACATGTATGTATCTCATTTAGAGGCAGGCAAAT 53 9572601 0.814712527 6 51 445 0.973333333 1.86332286 0.026666667 0.320754717 0.52 53 2 0 73 X:9572576-9572628 6 43.5 6389 FBgn0052699 2538.573333 91.48333333 141.3333333 0.017135609 0.475496447 0.307783019 12 12 12 0.01 dme-miR-308-3p 7mer-m1 TGTGATT X 9572664 9572670 - X_9572664_9572670_- 0.521223855 0.521223855 0.521223855 0 CG32699 FBtr0110850 9571535 9573007 X - 9572643 9572691 3'utr CG32699 FlyBase G66086.1 AAACGCAAGTCATTTCATCTTTGTGATTCTTATTATACACAACTATGTT 77 9572671 0.682805888 9 68 881 0.913978495 1.452297671 0.021505376 0.184210526 0.333333333 76 6 2 85 X:9572643-9572691 7 CG32699 FBtr0110850 9571535 9573007 TGTGATT 7mer-m1 dme-miR-308-3p X - 9572649 9572773 3'utr CG32699 FlyBase G49752.1 AGTTTCATGTGAACAAATGCTCACAGCACATAGATCCGGATCTGATTGCGCCCAGCTATGTTATTATTTATACTCGGACTCCAAACGCAAGTCATTTCATCTTTGTGATTCTTATTATACACAAC 86 9572671 0.928619987 15 81 724 0.952830189 1.402261382 0.094339623 0.197674419 0.349056604 86 2 3 101 X:9572649-9572773 7 59 6390 FBgn0052699 2538.573333 91.48333333 141.3333333 0.023241401 0.644926216 0.41745283 1 1 1 0.01 dme-miR-317-3p 7mer-A1 GTGTTCA X 9572980 9572986 - X_9572980_9572986_- 0.82334926 0.82334934 0.8233493 0 CG32699 FBtr0110850 9571535 9573007 X - 9572842 9572990 3'utr CG32699 FlyBase G66087.1 TTGCGTGTTCACAGGAAATGGAGTCAAGCTGGAGGACGTGGAGTTGTAACCAAGAGAAATACCCAACCTAAGCAGAATGTTCAACTGTCGAGTGTTTATTTTTAATATTTATTTATATCGTGTACGCGTGTCCTGGCACCCCTCTATAT 228 9572972 0.976559453 15 219 904 0.961089494 1.790636962 0.210116732 0.105263158 0.206225681 228 7 3 247 X:9572842-9572990 7 CG32699 FBtr0110850 9571535 9573007 GTGTTCA 7mer-A1 dme-miR-317-3p X - 9572922 9572988 3'utr CG32699 FlyBase G49753.2 GCGTGTTCACAGGAAATGGAGTCAAGCTGGAGGACGTGGAGTTGTAACCAAGAGAAATACCCAACCT 184 9572972 0.972375074 8 173 633 0.935153584 2.437750563 0.215017065 0.413043478 0.631399317 184 19 0 274 X:9572922-9572988 7 97 6391 FBgn0052699 2538.573333 91.48333333 141.3333333 0.038210438 1.060302423 0.686320755 -14 -14 -14 0.01 dme-miR-968-5p 6mer3-8 ACTACT X 9588566 9588571 + X_9588566_9588571_+ 1 1 1 0 Hex-A FBtr0333335 9587843 9589813 X + 9588539 9588568 3'utr Hex-A FlyBase G60168.1 AGAGCAAGTGAGAAAAGAAACTGTTATACT 5 9588562 0.618086538 2 5 21 1 0.77815125 0 0.2 0.333333333 5 0 0 6 X:9588539-9588568 3 Hex-A FBtr0333335 9587843 9589813 ACTACT 6mer3-8 dme-miR-968-5p X + 9588527 9588573 3'utr Hex-A FlyBase G45489.1 CGGAGATACTTAAGAGCAAGTGAGAAAAGAAACTGTTATACTACTGT 8 9588562 0.968416012 5 8 40 1 1.041392685 0.090909091 0.25 0.454545455 8 0 0 11 X:9588527-9588573 6 3.5 6392 FBgn0001186 1183.94 43.5 66.29 0.002956231 0.08045977 0.05279831 4 4 4 0.01 dme-miR-184-5p 6mer3-8 TGATAA X 9588828 9588833 + X_9588828_9588833_+ 1 1 1 0 Hex-A FBtr0333335 9587843 9589813 X + 9588759 9588844 3'utr Hex-A FlyBase G60169.1 CTAGGTAATGCTACGGTGTCCTTTCTGTAATTGTAAATGTTTATATAGAACCTATTACGAAGCGTTATATGATAATACTGCATACA 18 9588824 0.703602259 11 17 145 0.952380952 1.301029996 0.095238095 0.166666667 0.285714286 18 1 0 20 X:9588759-9588844 6 Hex-A FBtr0333335 9587843 9589813 TGATAA 6mer3-8 dme-miR-184-5p X + 9588756 9588837 3'utr Hex-A FlyBase G45490.1 TTACTAGGTAATGCTACGGTGTCCTTTCTGTAATTGTAAATGTTTATATAGAACCTATTACGAAGCGTTATATGATAATACT 18 9588823 0.802294235 9 15 131 0.823529412 1.447158031 0.294117647 0.611111111 0.794117647 18 6 0 28 X:9588756-9588837 6 8 6393 FBgn0001186 1183.94 43.5 66.29 0.006757099 0.183908046 0.120681852 4 5 4.5 0.01 dme-miR-1003-3p 6mer2-7 TGTGAG X 9589016 9589021 + X_9589016_9589021_+ 0.999998166 0.835272262 0.917635214 0.116478801 Hex-A FBtr0333335 9587843 9589813 X + 9588976 9589045 3'utr Hex-A FlyBase G60171.1 AAACTGTTTTTTTTTTTCCTTTTGATATAGAAACGCACTTTGTGAGCTATTATTTATGTAATTGTACATT 99 9589015 0.984468024 11 96 766 0.975 1.591064607 0.033333333 0.202020202 0.341666667 99 1 2 117 X:9588976-9589045 6 Hex-A FBtr0333335 9587843 9589813 TGTGAG 6mer2-7 dme-miR-1003-3p X + 9588945 9589042 3'utr Hex-A FlyBase G45492.1 ACACTTAAGCAGGTAAACTCTAAACAAAAATAAACTGTTTTTTTTTTTCCTTTTGATATAGAAACGCACTTTGTGAGCTATTATTTATGTAATTGTAC 56 9589015 0.987737718 14 53 472 0.92 1.537819095 0.053333333 0.214285714 0.413333333 56 5 1 69 X:9588945-9589042 6 72 6394 FBgn0001186 1183.94 43.5 66.29 0.060813893 1.655172414 1.086136672 1 1 1 0.01 dme-miR-184-3p 7mer-A1 CCGTCCA X 9604044 9604050 + X_9604044_9604050_+ 0.823349562 0.823349562 0.823349562 0 Gga FBtr0071363 9604012 9604280 X + 9603978 9604069 stop_codon Gga FlyBase G60182.1 TCGATTGTGGCCAAAGGCATTGACTATGTGGACTAAAATACCCCGACATATAAGTATCACCCGCTCCCGTCCACTGAAAGCGCAGGAGGAAA 125 9604042 0.94823978 8 121 529 0.967532468 1.395035018 0.474025974 0.192 0.344155844 125 0 5 149 X:9603978-9604069 7 Gga FBtr0071363 9604012 9604280 CCGTCCA 7mer-A1 dme-miR-184-3p X + 9604029 9604268 3'utr Gga FlyBase G45496.1 AAGTATCACCCGCTCCCGTCCACTGAAAGCGCAGGAGGAAAATGAAAAGAACGAAAGACAGTCAATTTTCCCGCATCTATGTTGTGCTCCCCATTATCTTAAAGATACTTTTGGTTTTTCAATTTCTGTATTGTATGTGTATGTACGCTGATAAGATTTTTATTCAAATTGCATTTTGCATACAAACGATTTAGTCGTAATATAATTATGTATCAAAGGTTTATAAATTATGAAAAAGTC 98 9604042 0.952880804 17 94 443 0.95 2.123851641 0.514285714 0.316326531 0.521428571 98 7 0 133 X:9604029-9604268 7 91 6395 FBgn0030141 373.9333333 19.18333333 29.23 0.243358888 4.743701129 3.113239822 2 2 2 0.01 dme-miR-305-5p 7mer-m1 GTACAAT X 9604477 9604483 - X_9604477_9604483_- 0.765586663 0.765586663 0.765586663 0 Lst8 FBtr0071368 9604152 9604877 X - 9604467 9604529 3'utr Lst8 FlyBase G66103.1 AATTACGATCTATCTTAAGCCAGTTAAATCAACAAATATCTCAGATGTACAATCATCCGCAAA 9 9604501 0.975704172 6 8 50 0.888888889 0.903089987 0 0 0 9 1 0 8 X:9604467-9604529 7 Lst8 FBtr0071368 9604152 9604877 GTACAAT 7mer-m1 dme-miR-305-5p X - 9604468 9604502 3'utr Lst8 FlyBase G49764.1 ATCAACAAATATCTCAGATGTACAATCATCCGCAA 5 9604483 0.972030232 4 4 24 0.909090909 1 0 0.8 0.909090909 5 1 0 10 X:9604468-9604502 7 5.5 6396 FBgn0264691 581.5666667 40.63666667 62.58666667 0.009457213 0.135345747 0.087878142 18 0 9 0.01 dme-miR-283-5p 7mer-m8 TGATATT X 9621673 9621679 + X_9621673_9621679_+ 0.620203677 0.620203677 0.620203677 0 CG42797 FBtr0332963|FBtr0303708|FBtr0303709|FBtr0303710 9621666|9621666|9621666|9621666 9622441|9622441|9622166|9623243 X + 9621600 9621700 stop_codon CG42797 FlyBase G60188.1 CACCCGAACTGCTGTACGAGAAGCTGCTGCTGGCCGTCGAGGAGACCAACACGTTCGGCATTGAGTAGACACGTGATATTGCACCCACATACACATACACA 88 9621679 0.960154471 10 84 411 0.966101695 1.579783597 0.059322034 0.284090909 0.466101695 88 2 2 114 X:9621600-9621700 7 CG42797 FBtr0303710|FBtr0303709|FBtr0303708|FBtr0332963 9621666|9621666|9621666|9621666 9623243|9622166|9622441|9622441 TGATATT 7mer-m8 dme-miR-283-5p X + 9621649 9621700 stop_codon CG42797 FlyBase G45500.1 CACGTTCGGCATTGAGTAGACACGTGATATTGCACCCACATACACATACACA 59 9621679 0.755135479 4 58 255 0.988636364 1.638489257 0.011363636 0.389830508 0.590909091 59 0 1 87 X:9621649-9621700 7 70 6397 FBgn0261931 415.6266667 8.42 12.89333333 0.168420377 8.313539192 5.429162358 -6 -6 -6 0.01 dme-miR-965-3p 6mer2-7 ACGCTT X 9621751 9621756 + X_9621751_9621756_+ 1 1 1 0 CG42797 FBtr0332963|FBtr0303708|FBtr0303709|FBtr0303710 9621666|9621666|9621666|9621666 9622441|9622441|9622166|9623243 X + 9621732 9621775 5'utr CG42797 FlyBase G60189.1 ACACAAAACACGCGCCTAAACGCTTTATTTCGATTTTAGAAGTT 29 9621748 0.97936369 4 27 188 0.90625 1.462397998 0.1875 0.103448276 0.1875 29 3 0 29 X:9621732-9621775 6 CG42797 FBtr0303710|FBtr0303709|FBtr0303708|FBtr0332963 9621666|9621666|9621666|9621666 9623243|9622166|9622441|9622441 ACGCTT 6mer2-7 dme-miR-965-3p X + 9621728 9621767 5'utr CG42797 FlyBase G45501.1 AGATACACAAAACACGCGCCTAAACGCTTTATTTCGATTT 12 9621748 0.969116415 4 12 70 1 1.204119983 0 0.25 0.4375 12 0 0 16 X:9621728-9621767 6 20.5 6398 FBgn0261931 415.6266667 8.42 12.89333333 0.04932311 2.434679335 1.589968976 3 3 3 0.01 dme-miR-1002-5p 6mer3-8 CTACTT X 9622176 9622181 + X_9622176_9622181_+ 0.999984337 0.991618249 0.995801293 0.005915726 CG42797 FBtr0332963|FBtr0303708|FBtr0303710 9621666|9621666|9621666 9622441|9622441|9623243 X + 9622153 9622225 5'utr-coding CG42797 FlyBase G60191.1 ATGCCTAGCCATAGACAGACTTGCTACTTTAGGCATGGCATCCCACTAGTTTGTAGACAATTTGCCTTCGCCT 7 9622181 0.973934829 6 6 44 0.875 0.84509804 0.125 0.142857143 0.25 7 1 0 7 X:9622153-9622225 6 CG42797 FBtr0303710|FBtr0303708|FBtr0332963 9621666|9621666|9621666 9623243|9622441|9622441 CTACTT 6mer2-7 dme-miR-968-5p X + 9622133 9622193 5'utr-coding CG42797 FlyBase G45503.1 CAAAATTGTAAAGCAAATAAATGCCTAGCCATAGACAGACTTGCTACTTTAGGCATGGCAT 6 9622175 0.965650451 6 6 32 1 1.079181246 0 0.5 0.75 6 0 0 12 X:9622133-9622193 6 4 6399 FBgn0261931 415.6266667 8.42 12.89333333 0.009624022 0.475059382 0.310237849 -5 1 -2 0.01 dme-miR-31a-5p 7mer-A1 CTTGCCA X 9622271 9622277 + X_9622271_9622277_+ 0.823349562 0.823349562 0.823349562 0 CG42797 FBtr0332963|FBtr0303708|FBtr0303710 9621666|9621666|9621666 9622441|9622441|9623243 X + 9622239 9622370 3'utr CG42797 FlyBase G60192.1 ATTGAATGGAAGTTACCTCAAGAGCAAAACGGCTTGCCAGCGCCGCCAGTCATTAGTCCTAAGATCTACACGCCCCCGGATAATTTCTAAGCCTAAGTATCCTTCGCTTGACTCTGCCTGATTTACACTCGA 27 9622294 0.979009938 13 24 166 0.90625 0.985276743 0.03125 0.185185185 0.3125 27 1 2 29 X:9622239-9622370 7 CG42797 FBtr0303710|FBtr0303708|FBtr0332963 9621666|9621666|9621666 9623243|9622441|9622441 CTTGCCA 7mer-A1 dme-miR-31a-5p X + 9622264 9622305 3'utr CG42797 FlyBase G45504.2 AAAACGGCTTGCCAGCGCCGCCAGTCATTAGTCCTAAGATCT 7 9622292 0.904329 4 5 27 0.5 0.903089987 0.4375 0.428571429 0.75 7 8 0 8 X:9622264-9622305 7 7 6400 FBgn0261931 415.6266667 8.42 12.89333333 0.016842038 0.831353919 0.542916236 -23 -21 -22 0.01 dme-miR-1012-3p 6mer3-8 TTGACT X 9622346 9622351 + X_9622346_9622351_+ 1 1 1 0 CG42797 FBtr0332963|FBtr0303708|FBtr0303710 9621666|9621666|9621666 9622441|9622441|9623243 X + 9622239 9622370 3'utr CG42797 FlyBase G60192.1 ATTGAATGGAAGTTACCTCAAGAGCAAAACGGCTTGCCAGCGCCGCCAGTCATTAGTCCTAAGATCTACACGCCCCCGGATAATTTCTAAGCCTAAGTATCCTTCGCTTGACTCTGCCTGATTTACACTCGA 27 9622352 0.979009938 13 24 166 0.90625 0.985276743 0.03125 0.185185185 0.3125 27 1 2 29 X:9622239-9622370 6 CG42797 FBtr0303710|FBtr0303708|FBtr0332963 9621666|9621666|9621666 9623243|9622441|9622441 TTGACT 6mer3-8 dme-miR-1012-3p X + 9622328 9622364 3'utr CG42797 FlyBase G45505.1 AGCCTAAGTATCCTTCGCTTGACTCTGCCTGATTTAC 9 9622342 0.747596645 7 9 70 1 1.113943352 0.538461538 0.444444444 0.615384615 9 0 0 13 X:9622328-9622364 6 10 6401 FBgn0261931 415.6266667 8.42 12.89333333 0.024060054 1.187648456 0.775594623 -6 4 -1 0.01 dme-miR-283-5p 6mer3-8 TGATAT X 9628972 9628977 - X_9628972_9628977_- 1 1 1 0 l(1)G0232 FBtr0071405|FBtr0333427|FBtr0071406|FBtr0100193|FBtr0071407|FBtr0100192|FBtr0303559|FBtr0071404|FBtr0303558 9628720|9628720|9628720|9626293|9626292|9628720|9628720|9628720|9626293 9629105|9629105|9629105|9629105|9629105|9629105|9629105|9629105|9629105 X - 9628956 9628999 3'utr l(1)G0232 FlyBase G66119.1 TCGACTAGATAGATGTTCGTCCTGATATGATATAATATGGTATA 11 9628977 0.980432118 5 11 73 1 1.278753601 0 0.636363636 0.789473684 11 0 0 19 X:9628956-9628999 6 l(1)G0232 FBtr0100193|FBtr0071406|FBtr0333427|FBtr0071405|FBtr0303558|FBtr0071404|FBtr0303559|FBtr0071407|FBtr0100192 9626293|9628720|9628720|9628720|9626293|9628720|9628720|9626292|9628720 9629105|9629105|9629105|9629105|9629105|9629105|9629105|9629105|9629105 TGATAT 6mer3-8 dme-miR-283-5p X - 9628950 9629015 3'utr l(1)G0232 FlyBase G49777.1 GGAGTTGTAACTTTCTTCGACTAGATAGATGTTCGTCCTGATATGATATAATATGGTATATATGAT 16 9628977 0.972570574 10 15 129 0.956521739 1.041392685 0.217391304 0.3125 0.52173913 16 0 1 22 X:9628950-9629015 6 11.5 6402 FBgn0028341 422.0033333 16.54 25.49666667 0.02725097 0.69528416 0.451039352 0 0 0 0.01 dme-miR-308-3p 7mer-m1 TGTGATT X 9666507 9666513 - X_9666507_9666513_- 0.521223855 0.521223855 0.521223855 0 nej FBtr0333521|FBtr0302723 9665671|9665440 9669706|9669706 X - 9666501 9666544 3'utr nej FlyBase G66134.1 AGAGAAAGAGAGAGCATATTCCAAAACTATTTGTGATTACAATT 22 9666515 0.968020355 5 22 123 1 1.462397998 0.172413793 0.272727273 0.448275862 22 0 0 29 X:9666501-9666544 7 nej FBtr0333521|FBtr0302723 9665671|9665440 9669706|9669706 TGTGATT 7mer-m1 dme-miR-308-3p X - 9666467 9666543 3'utr nej FlyBase G49788.1 GAGAAAGAGAGAGCATATTCCAAAACTATTTGTGATTACAATTATATATGATGATGATGAAGAGGAAGAAAGCGGAA 26 9666514 0.976159546 7 25 161 0.972972973 1.255272505 0.135135135 0.346153846 0.540540541 26 0 1 36 X:9666467-9666543 7 16.5 6403 FBgn0261617 2552.683333 20.01666667 30.83666667 0.006463786 0.824313072 0.535077289 2 1 1.5 0.01 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA X 9667476 9667481 - X_9667476_9667481_- 1 1 1 0 nej FBtr0333521|FBtr0333521|FBtr0302723|FBtr0302723 9665671|9665671|9665440|9665440 9669706|9669706|9669706|9669706 X - 9667410 9667491 3'utr nej FlyBase G66138.1 ATTTACCGATTACTTACTGATAGGTGTAGTAGGTCACTCGTACGCGAAAGTTGGTTAAATCCAATGCCTAGTTCGTAAGCCG 14 9667480 0.984048475 8 14 116 1 1.278753601 0.421052632 0.357142857 0.526315789 14 0 0 19 X:9667410-9667491 6 nej FBtr0333521|FBtr0333521|FBtr0302723|FBtr0302723 9665671|9665671|9665440|9665440 9669706|9669706|9669706|9669706 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" X - 9667408 9667486 3'utr nej FlyBase G49789.1 CCGATTACTTACTGATAGGTGTAGTAGGTCACTCGTACGCGAAAGTTGGTTAAATCCAATGCCTAGTTCGTAAGCCGAG 10 9667476 0.973016997 8 10 61 1 1.230448921 0.411764706 0.3 0.588235294 10 0 0 17 X:9667408-9667486 6 5 6404 FBgn0261617 2552.683333 20.01666667 30.83666667 0.001958723 0.24979184 0.162144633 -1 -5 -3 0.01 dme-miR-34-5p 6mer3-8 CACTGC X 9667624 9667629 - X_9667624_9667629_- 1 1 1 0 nej FBtr0333521|FBtr0302723 9665671|9665440 9669706|9669706 X - 9667593 9667700 3'utr nej FlyBase G66139.1 GACAGCAAGAGAGCGAGACAGTAGATGAGCAGGAGAGGATTTTGTAAATTTTAGATACTAGGATACTTATTCACTGCGCATAAAAATGCCTTCAATTGCGACATCAGC 20 9667613 0.959421575 7 20 107 1 1.431363764 0.37037037 0.35 0.518518519 20 0 0 27 X:9667593-9667700 6 nej FBtr0333521|FBtr0302723 9665671|9665440 9669706|9669706 CACTGC 6mer3-8 dme-miR-34-5p X - 9667594 9667693 3'utr nej FlyBase G49790.1 AGAGAGCGAGACAGTAGATGAGCAGGAGAGGATTTTGTAAATTTTAGATACTAGGATACTTATTCACTGCGCATAAAAATGCCTTCAATTGCGACATCAG 19 9667614 0.964004892 8 19 105 1 1.414973348 0.153846154 0.315789474 0.5 19 0 0 26 X:9667594-9667693 6 10 6405 FBgn0261617 2552.683333 20.01666667 30.83666667 0.003917446 0.49958368 0.324289266 -16 -15 -15.5 0.01 dme-miR-305-3p 7mer-m8 ATGTGCC X 9668813 9668819 - X_9668813_9668819_- 0.674515655 0.674515655 0.674515655 0 nej FBtr0333521|FBtr0302723 9665671|9665440 9669706|9669706 X - 9668795 9668828 3'utr nej FlyBase G66145.1 ATAGTGAACATGTGCCTGTTGGCGATCGGCAGTT 8 9668818 0.696456039 4 8 48 1 1 0 0.125 0.3 8 0 0 10 X:9668795-9668828 7 nej FBtr0333521|FBtr0302723 9665671|9665440 9669706|9669706 ATGTGCC 7mer-m8 dme-miR-305-3p X - 9668797 9668837 3'utr nej FlyBase G49797.1 ATATAGCCTATAGTGAACATGTGCCTGTTGGCGATCGGCAG 5 9668818 0.936083545 3 4 33 0.833333333 0.698970004 0 0.2 0.333333333 5 1 0 5 X:9668797-9668837 7 6 6406 FBgn0261617 2552.683333 20.01666667 30.83666667 0.002350468 0.299750208 0.19457356 -1 -1 -1 0.01 dme-miR-278-3p 6mer3-8 CCCACC X 9669409 9669414 - X_9669409_9669414_- 1 1 1 0 nej FBtr0333521|FBtr0302723 9665671|9665440 9669706|9669706 X - 9669295 9669454 3'utr nej FlyBase G66149.2 AACAAATATCGCGCCTAATGTGTACTGTAGATTAAGATGACCCACCATTACAACCACTAACAAATACCTTATTATTTAAGTTTAAGACGAAAGTTGGACAGAGCATTATGATTCGATTTCCATTTTATGTCCGCGATTTAGCAAATATATAATATCATAT 62 9669435 0.823744238 25 56 420 0.876712329 1.806179974 0.136986301 0.14516129 0.273972603 62 9 0 64 X:9669295-9669454 6 nej FBtr0333521|FBtr0302723 9665671|9665440 9669706|9669706 CCCACC 6mer3-8 dme-miR-278-3p X - 9669303 9669448 3'utr nej FlyBase G49799.2 TATCGCGCCTAATGTGTACTGTAGATTAAGATGACCCACCATTACAACCACTAACAAATACCTTATTATTTAAGTTTAAGACGAAAGTTGGACAGAGCATTATGATTCGATTTCCATTTTATGTCCGCGATTTAGCAAATATATAA 41 9669435 0.981871535 15 39 276 0.968253968 1.785329835 0.26984127 0.365853659 0.587301587 41 2 0 61 X:9669303-9669448 6 6.5 6407 FBgn0261617 2552.683333 20.01666667 30.83666667 0.00254634 0.324729392 0.210788023 21 21 21 0.01 dme-miR-14-3p 7mer-A1 AGACTGA X 9669618 9669624 - X_9669618_9669624_- 0.823349562 0.823349562 0.823349562 0 nej FBtr0333521|FBtr0302723|FBtr0071402|FBtr0302722 9665671|9665440|9669513|9669513 9669706|9669706|9669706|9669706 X - 9669529 9669660 5'utr nej FlyBase G66150.1 ATGGTTGGTAGGCGATGTGGCTAGAGGGCTAGGGCTAGACTGAATGAATGAATGAGTGTCCAGTAGCCGCAGACGGGATGACGACGAAGACCAACCGGCAGGGATAACCAGTGTGTGTTAAGCGAATTAACA 53 9669625 0.904449717 15 49 208 0.925373134 1.792391689 0.373134328 0.226415094 0.388059701 53 5 0 62 X:9669529-9669660 7 nej FBtr0071402|FBtr0302722|FBtr0333521|FBtr0302723 9669513|9669513|9665671|9665440 9669706|9669706|9669706|9669706 AGACTGA 7mer-A1 dme-miR-14-3p X - 9669569 9669664 5'utr nej FlyBase G49801.1 TACAATGGTTGGTAGGCGATGTGGCTAGAGGGCTAGGGCTAGACTGAATGAATGAATGAGTGTCCAGTAGCCGCAGACGGGATGACGACGAAGACC 42 9669625 0.93079366 9 41 155 0.985074627 1.819543936 0.343283582 0.380952381 0.611940299 42 1 0 66 X:9669569-9669664 7 31 6408 FBgn0261617 2552.683333 20.01666667 30.83666667 0.012144084 1.548709409 1.005296725 1 1 1 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 2L 10008362 10008368 + 2L_10008362_10008368_+ 0.782911824 0.782911823 0.782911823 0 CG4747 FBtr0079930|FBtr0303902 10007765|10007765 10008889|10008889 2L + 10008342 10008391 3'utr CG4747 FlyBase G3640.1 ATACTGCATCCGAATAAAATGTACAAAGCATACTTGTGAAAGACAACGCC 10 10008361 0.930338526 4 9 35 0.916666667 0.740362689 0.083333333 0.2 0.333333333 10 0 1 11 2L:10008342-10008391 7 CG4747 FBtr0079930|FBtr0303902 10007765|10007765 10008889|10008889 GTACAAA 7mer-A1 dme-miR-305-5p 2L + 10008331 10008373 3'utr CG4747 FlyBase G2874.1 AAGTGTATAGAATACTGCATCCGAATAAAATGTACAAAGCATA 6 10008358 0.865282217 3 5 18 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2L:10008331-10008373 7 7 1 FBgn0043456 4161.81 159.8633333 245.0833333 0.00168196 0.043787402 0.028561714 1 4 2.5 0.1 dme-miR-184-3p 6mer3-8 TCCGTC 2L 10011984 10011989 + 2L_10011984_10011989_+ 0.999999372 0.999998779 0.999999075 4.24E-07 Trp1 FBtr0305986|FBtr0343741 10011911|10011911 10012118|10012118 2L + 10011956 10012010 3'utr Trp1 FlyBase G3649.1 CGAATTTGTATTTATAATTTCTTTTATTTCCGTCGAACTTTTGGTTGTATGTTTT 220 10011983 0.748555056 9 220 2429 1 2.440909082 0.054347826 0.190909091 0.355072464 220 0 0 276 2L:10011956-10012010 6 Trp1 FBtr0305986|FBtr0343741 10011911|10011911 10012118|10012118 TCCGTC 6mer3-8 dme-miR-184-3p 2L + 10011962 10012010 3'utr Trp1 FlyBase G2880.1 TGTATTTATAATTTCTTTTATTTCCGTCGAACTTTTGGTTGTATGTTTT 158 10011983 0.757499048 10 156 1705 0.982300885 2.045322979 0.088495575 0.310126582 0.517699115 158 3 1 222 2L:10011962-10012010 6 188 2 FBgn0011584 1171.806667 85.36666667 131.8133333 0.160436022 2.20226474 1.426259357 1 1 1 0.1 dme-miR-276a-3p 6mer2-7 GTTCCT 2L 10012081 10012086 + 2L_10012081_10012086_+ 0.999999969 0.99999957 0.999999769 2.83E-07 Trp1 FBtr0305986|FBtr0343741 10011911|10011911 10012118|10012118 2L + 10012025 10012102 3'utr Trp1 FlyBase G3650.1 ATATTGAATAGCGCAAAAGACATACATTAACTTTAGCTTTTAATTGTAAATCCTTTGTTCCTTAATAAATATTATTGT 26 10012079 0.993348097 9 26 317 1 1.505149978 0.125 0.230769231 0.375 26 0 0 32 2L:10012025-10012102 6 Trp1 FBtr0305986|FBtr0343741 10011911|10011911 10012118|10012118 GTTCCT 6mer2-7 dme-miR-276a-3p 2L + 10012026 10012098 3'utr Trp1 FlyBase G2881.1 TATTGAATAGCGCAAAAGACATACATTAACTTTAGCTTTTAATTGTAAATCCTTTGTTCCTTAATAAATATTA 21 10012079 0.992228769 8 19 213 0.870967742 1.431363764 0.225806452 0.380952381 0.580645161 21 4 0 27 2L:10012026-10012098 6 17 3 FBgn0011584 1171.806667 85.36666667 131.8133333 0.014507513 0.199140961 0.128970261 2 2 2 0.1 dme-bantam-3p 6mer3-8 TGATCT 2L 10013099 10013104 + 2L_10013099_10013104_+ 0.733658444 0.835252765 0.784455604 0.071838089 Trp1 FBtr0079931|FBtr0079932 10012492|10012492 10013170|10013170 2L + 10013080 10013120 3'utr Trp1 FlyBase G3652.1 AAATAAAGCTAGGCAATTCTGATCTGATGTGAGAGATATTT 50 10013099 0.613291843 6 45 346 0.907692308 1.071882007 0.369230769 0.28 0.446153846 50 2 4 59 2L:10013080-10013120 6 Trp1 FBtr0079931|FBtr0079932 10012492|10012492 10013170|10013170 TGATCT 6mer3-8 dme-bantam-3p 2L + 10013065 10013120 3'utr Trp1 FlyBase G2883.1 AATTAACTATTATATAAATAAAGCTAGGCAATTCTGATCTGATGTGAGAGATATTT 53 10013099 0.622704741 8 50 341 0.915662651 1.880813592 0.313253012 0.396226415 0.614457831 53 7 0 76 2L:10013065-10013120 6 49.5 4 FBgn0011584 1171.806667 85.36666667 131.8133333 0.042242463 0.57985162 0.375531054 0 0 0 0.1 dme-miR-79-3p 6mer3-8 TAGCTT 2L 10059636 10059641 + 2L_10059636_10059641_+ 0.902980616 0.898759404 0.90087001 0.002984839 Pen FBtr0079937 10059466 10060095 2L + 10059517 10059649 3'utr Pen FlyBase G3662.1 TACACCTTCGACCGCGCTCACACACTATGCCATTGTCAAACATACGCATACTCATCATCACATCTTACAAACATTCCCAAACACTTTGGAGGTATGCATGGAAACACAGGCGAATGCATTAGCTTAAAGTCAT 36 10059635 0.754718326 13 34 177 0.977272727 1.633468456 0.227272727 0.194444444 0.340909091 36 1 0 43 2L:10059517-10059649 6 Pen FBtr0079937 10059466 10060095 TAGCTT 6mer3-8 dme-miR-79-3p 2L + 10059558 10059646 3'utr Pen FlyBase G2895.2 ATACGCATACTCATCATCACATCTTACAAACATTCCCAAACACTTTGGAGGTATGCATGGAAACACAGGCGAATGCATTAGCTTAAAGT 20 10059635 0.96243025 7 19 92 0.962962963 1.414973348 0.148148148 0.3 0.481481481 20 1 0 26 2L:10059558-10059646 6 16.5 5 FBgn0267727 3642.156667 171.07 261.8833333 0.004530283 0.096451745 0.063005155 1 1 1 0.1 dme-miR-8-3p 6mer2-7 AGTATT 2L 10059923 10059928 + 2L_10059923_10059928_+ 0.999799578 0.999999943 0.99989976 0.000141633 Pen FBtr0079937 10059466 10060095 2L + 10059771 10060089 3'utr Pen FlyBase G3664.1 CGATGCAACCGCTCGGGCAGCTGCGCTGGCTGGGATCCGTGGATCATAGTATTTCCAGAATCCGTCTGTACAGGGGGCACCTTATGTTTGCGTGTACTAGGCTTTTTATTGGATACGTTTCGAGCTCATTTCGGATATATTTTAGGCTGTTTAGTATTTATTTATGTATACAGGAAACGCTTTTAATCCTCCACCTTCGCGCAAGCATTACAACAACAACAACAACAACAACAACTCATTCCCTTCACACCAGTGTCCTCATTCCCGAATCGCATGTTTATATTCAAAGTTGTCAATAAATAATGAATTGTTTGAATGA 200 10059912 0.991352418 49 185 1976 0.923728814 2.037426498 0.144067797 0.175 0.300847458 200 17 1 218 2L:10059771-10060089 6 Pen FBtr0079937 10059466 10060095 AGTATT 6mer2-7 dme-miR-8-3p 2L + 10059663 10059977 3'utr Pen FlyBase G2896.1 TGGCAAAATCCACTCGCATGAATCCCCATTTAACATACCCGTATTCCTCGCGTTAGACTAGACTTCACAGATTGCAGCATGGATCTTTCTGGCAGTGTTCCTCGTTCACGATGCAACCGCTCGGGCAGCTGCGCTGGCTGGGATCCGTGGATCATAGTATTTCCAGAATCCGTCTGTACAGGGGGCACCTTATGTTTGCGTGTACTAGGCTTTTTATTGGATACGTTTCGAGCTCATTTCGGATATATTTTAGGCTGTTTAGTATTTATTTATGTATACAGGAAACGCTTTTAATCCTCCACCTTCGCGCAAGCA 153 10059912 0.988965294 44 142 1391 0.919491525 1.336459734 0.084745763 0.405228758 0.61440678 153 10 9 217 2L:10059663-10059977 6 64 6 FBgn0267727 3642.156667 171.07 261.8833333 0.017572006 0.374115859 0.244383631 11 11 11 0.1 dme-miR-305-5p 6mer3-8 AGTACA 2L 10114 10119 - 2L_10114_10119_- 0.908863333 0.793635991 0.851249662 0.081478005 l(2)gl FBtr0078168|FBtr0306591|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0306590|FBtr0078170|FBtr0330655|FBtr0078171|FBtr0306592|FBtr0078166 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11214|11214|11214|11214|11309|11214|11214|11214 2L - 10108 10152 3'utr l(2)gl FlyBase G6257.1 TGAGAAGTAAGTTAATGAGCCTTCAAGTACTTTAGTACATAATGT 25 10137 0.747475541 5 23 187 0.961538462 1.096910013 0.269230769 0.04 0.076923077 25 0 1 25 2L:10108-10152 6 l(2)gl FBtr0306592|FBtr0306590|FBtr0078166|FBtr0330655|FBtr0078171|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0078170|FBtr0078168|FBtr0306591 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11309|11214|11214|11214|11214|11214|11214|11214 AGTACA 6mer3-8 dme-miR-305-5p 2L - 10108 10152 3'utr l(2)gl FlyBase G4879.1 TGAGAAGTAAGTTAATGAGCCTTCAAGTACTTTAGTACATAATGT 13 10121 0.637309891 6 13 93 1 1.322219295 0.142857143 0.461538462 0.666666667 13 0 0 21 2L:10108-10152 6 12.5 7 FBgn0002121 6538.69 148.3266667 227.85 0.001911698 0.08427345 0.054860654 18 2 10 0.1 dme-miR-283-5p 7mer-m8 TGATATT 2L 10199632 10199638 - 2L_10199632_10199638_- 0.619407282 0.618823679 0.61911548 0.000412668 Ripalpha FBtr0079962 10199399 10199831 2L - 10199604 10199659 3'utr Ripalpha FlyBase G9501.2 AATTTTTGAAACAGTGATACATGATATTCCCCCCCTAATTAATCTAAATCCAAAGA 79 10199633 0.791341577 7 76 563 0.989361702 1.968482949 0.276595745 0.189873418 0.319148936 79 1 0 93 2L:10199604-10199659 7 Ripalpha FBtr0079962 10199399 10199831 TGATATT 7mer-m8 dme-miR-283-5p 2L - 10199561 10199654 3'utr Ripalpha FlyBase G7373.1 TTGAAACAGTGATACATGATATTCCCCCCCTAATTAATCTAAATCCAAAGAATGATATGAGTTATGGCTAGAAATGAGATCTTTAAGCATATTG 34 10199633 0.905026816 5 33 222 0.97826087 1.653212514 0.304347826 0.205882353 0.413043478 34 1 0 45 2L:10199561-10199654 7 52 8 FBgn0032189 194.0066667 18.85 28.7 0.268032026 2.75862069 1.81184669 -5 -5 -5 0.1 dme-bantam-3p 6mer2-7 GATCTC 2L 102021 102026 + 2L_102021_102026_+ 0.999999989 0.999999999 0.999999994 0 Zir FBtr0078103 101917 102086 2L + 101952 102079 3'utr Zir FlyBase G440.1 ATCATACTTTTGGTCTTTCATGTCTAGCGTATCGGATTATTTTAAGTAAATCTTACATTTTAAATTATCGATCTCTATAATTGCTAATGTAATAGCATAACTTTTTTATGCATCTAATAGATTAAGCA 152 102029 0.990765267 18 144 1487 0.952380952 1.954242509 0.259259259 0.171052632 0.333333333 152 8 1 180 2L:101952-102079 6 Zir FBtr0078103 101917 102086 GATCTC 6mer2-7 dme-bantam-3p 2L + 101991 102079 3'utr Zir FlyBase G370.1 TTTTAAGTAAATCTTACATTTTAAATTATCGATCTCTATAATTGCTAATGTAATAGCATAACTTTTTTATGCATCTAATAGATTAAGCA 107 102029 0.974162651 13 97 1051 0.905660377 1.857332496 0.182389937 0.38317757 0.58490566 107 14 1 144 2L:101991-102079 6 122.5 9 FBgn0031216 988 18.33333333 28.1 0.123987854 6.681818182 4.359430605 -8 -8 -8 0.1 dme-miR-34-5p 8mer-A1 CACTGCCA 2L 10202680 10202687 - 2L_10202680_10202687_- 0.67840795 0.67840794 0.678407945 0 CG34159 FBtr0112350 10202518 10202882 2L - 10202635 10202704 3'utr CG34159 FlyBase G9506.1 AAAAAACGATTTAAATCCACTGCCAGCTGAAAGGCAAACCATGATTCAATAAAGTGTACATTGGCAAACG 41 10202689 0.9615275 7 39 196 0.957446809 1.653212514 0.319148936 0.146341463 0.255319149 41 2 0 45 2L:10202635-10202704 8 CG34159 FBtr0112350 10202518 10202882 CACTGCCA 8mer-A1 dme-miR-34-5p 2L - 10202613 10202703 3'utr CG34159 FlyBase G7375.1 AAAAACGATTTAAATCCACTGCCAGCTGAAAGGCAAACCATGATTCAATAAAGTGTACATTGGCAAACGATTTTTATCCCTGGCACCCTGA 15 10202689 0.970356615 5 12 69 0.782608696 0.954242509 0.304347826 0.4 0.608695652 15 4 1 18 2L:10202613-10202703 8 25 10 FBgn0085188 482 64.53 98.53333333 0.05186722 0.387416705 0.253721245 2 2 2 0.1 dme-miR-305-3p 6mer3-8 ATGTGC 2L 10202848 10202853 - 2L_10202848_10202853_- 0.999490783 1 0.999745392 0.000360059 CG34159 FBtr0112350 10202518 10202882 2L - 10202817 10202868 3'utr CG34159 FlyBase G9507.1 ACAGCGGACAACGGCATGTGCTCCATGTGGTAACGATTAATTAAATTATACA 6 10202852 0.970138544 2 5 26 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2L:10202817-10202868 6 CG34159 FBtr0112350 10202518 10202882 ATGTGC 6mer3-8 dme-miR-305-3p 2L - 10202830 10202866 3'utr CG34159 FlyBase G7376.1 AGCGGACAACGGCATGTGCTCCATGTGGTAACGATTA 6 10202843 0.947974797 3 6 28 1 1.041392685 0 0.5 0.727272727 6 0 0 11 2L:10202830-10202866 6 5 11 FBgn0085188 482 64.53 98.53333333 0.010373444 0.077483341 0.050744249 -1 -10 -5.5 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 2L 10204785 10204790 - 2L_10204785_10204790_- 1 1 1 0 CG5734 FBtr0079960 10204755 10205368 2L - 10204764 10204827 3'utr CG5734 FlyBase G9509.1 CTAAACAATGAACTATGAATGTACATTCCCTTATCTGTTGACTCACTTCCAAATAAATGACAAA 21 10204790 0.990806718 8 19 191 0.92 0.884606581 0.04 0.142857143 0.28 21 0 2 23 2L:10204764-10204827 6 CG5734 FBtr0079960 10204755 10205368 TTGACT 6mer3-8 dme-miR-1012-3p 2L - 10204758 10204818 3'utr CG5734 FlyBase G7377.1 GAACTATGAATGTACATTCCCTTATCTGTTGACTCACTTCCAAATAAATGACAAAAATGTT 16 10204790 0.969612823 8 14 138 0.904761905 1.278753601 0.238095238 0.3125 0.476190476 16 2 0 19 2L:10204758-10204818 6 16 12 FBgn0032191 425.53 23.29666667 35.42 0.037600169 0.686793533 0.451722191 0 0 0 0.1 dme-bantam-3p 6mer3-8 TGATCT 2L 10205018 10205023 - 2L_10205018_10205023_- 1 0.999999942 0.999999971 7.07E-08 CG5734 FBtr0079960 10204755 10205368 2L - 10204970 10205034 3'utr CG5734 FlyBase G9510.1 ACTATTGTAAATGATCTGTAAATGGATGCTCGACGGATACTTTTATCTCTTTTATCATTTCTTGT 17 10205023 0.7975538 8 16 164 0.947368421 0.954242509 0 0.117647059 0.210526316 17 0 1 18 2L:10204970-10205034 6 CG5734 FBtr0079960 10204755 10205368 TGATCT 6mer3-8 dme-bantam-3p 2L - 10204979 10205031 3'utr CG5734 FlyBase G7379.1 ATTGTAAATGATCTGTAAATGGATGCTCGACGGATACTTTTATCTCTTTTATC 20 10205012 0.764931139 6 19 144 0.9375 1.477121255 0.125 0.4 0.625 20 2 0 30 2L:10204979-10205031 6 15 13 FBgn0032191 425.53 23.29666667 35.42 0.035250159 0.643868937 0.423489554 0 -11 -5.5 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 10243 10248 - 2L_10243_10248_- 0.895485162 0.831522796 0.863503979 0.045228247 l(2)gl FBtr0078168|FBtr0306591|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0306590|FBtr0078170|FBtr0330655|FBtr0078171|FBtr0306592|FBtr0078166 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11214|11214|11214|11214|11309|11214|11214|11214 2L - 10221 10293 3'utr l(2)gl FlyBase G6258.1 TATTTAATTCTTTGGCTAATACGTCAGTTAAAAAAGGCTACATTTTGATGATACTCACAAATGTAATTTTTGC 52 10245 0.751064451 6 46 396 0.901639344 1.439332694 0.098360656 0.134615385 0.262295082 52 5 1 55 2L:10221-10293 6 l(2)gl FBtr0306592|FBtr0306590|FBtr0078166|FBtr0330655|FBtr0078171|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0078170|FBtr0078168|FBtr0306591 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11309|11214|11214|11214|11214|11214|11214|11214 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L - 10196 10262 3'utr l(2)gl FlyBase G4880.1 AAAAGGCTACATTTTGATGATACTCACAAATGTAATTTTTGCATTCTACACAGGTGCAATTAAAAAA 23 10245 0.983430263 3 22 169 0.948717949 1.568201724 0.102564103 0.47826087 0.692307692 23 2 0 37 2L:10196-10262 6 35 14 FBgn0002121 6538.69 148.3266667 227.85 0.005352754 0.235965661 0.153609831 -3 -3 -3 0.1 dme-miR-1006-3p 7mer-A1 GAATTTA 2L 10256920 10256926 - 2L_10256920_10256926_- 0.823349558 0.823347521 0.82334854 1.48E-06 Pten FBtr0089905|FBtr0089901 10256317|10256317 10257117|10257117 2L - 10256912 10256960 5'utr Pten FlyBase G9592.1 GATCGATTACAGCTGCGCTCTGCACATCTGTTTAGAATTTAATGTACAT 9 10256931 0.977496252 7 9 66 1 1.041392685 0.181818182 0.222222222 0.363636364 9 0 0 11 2L:10256912-10256960 7 Pten FBtr0089905|FBtr0089901 10256317|10256317 10257117|10257117 GAATTTA 7mer-A1 dme-miR-1006-3p 2L - 10256917 10256962 5'utr Pten FlyBase G7439.1 ACGATCGATTACAGCTGCGCTCTGCACATCTGTTTAGAATTTAATG 8 10256931 0.980928934 5 8 59 1 0.903089987 0.125 0 0 8 0 0 8 2L:10256917-10256962 7 4 15 FBgn0026379 759.45 36.16 55.47 0.00526697 0.110619469 0.072111051 5 5 5 0.1 dme-bantam-3p 6mer2-7 GATCTC 2L 10257077 10257082 - 2L_10257077_10257082_- 0.999964524 0.999990374 0.999977449 1.83E-05 Pten FBtr0089905|FBtr0089901 10256317|10256317 10257117|10257117 2L - 10257060 10257119 stop_codon Pten FlyBase G9594.1 AATCACCCGAGACGATTTAAAAGACTTCTGGCTGAACGATCTCTTAATTTTGATGTATAA 180 10257075 0.658411447 12 175 1275 0.972972973 2.033423755 0.238738739 0.211111111 0.36036036 180 5 1 216 2L:10257060-10257119 6 Pten FBtr0089905|FBtr0089901 10256317|10256317 10257117|10257117 GATCTC 6mer2-7 dme-bantam-3p 2L - 10257057 10257119 stop_codon Pten FlyBase G7440.2 AATCACCCGAGACGATTTAAAAGACTTCTGGCTGAACGATCTCTTAATTTTGATGTATAAAAC 156 10257075 0.669734764 12 151 1092 0.978070175 2.047274867 0.210526316 0.320512821 0.535087719 156 4 1 223 2L:10257057-10257119 6 129.5 16 FBgn0026379 759.45 36.16 55.47 0.170518138 3.58130531 2.334595277 -7 -7 -7 0.1 dme-miR-33-5p 6mer3-8 CAATGC 2L 10262064 10262069 - 2L_10262064_10262069_- 0.99999982 0.999988163 0.999993992 8.20E-06 Rsf1 FBtr0333411 10261793 10262815 2L - 10262056 10262085 3'utr Rsf1 FlyBase G9605.1 ACGGCAAAAATCTAGCCAATGCTGCAAGCA 7 10262066 0.726989354 2 7 20 1 1.041392685 0 0.571428571 0.727272727 7 0 0 11 2L:10262056-10262085 6 Rsf1 FBtr0333411 10261793 10262815 CAATGC 6mer3-8 dme-miR-33-5p 2L - 10262057 10262100 3'utr Rsf1 FlyBase G7452.1 TGTAGTTGGGTCGAAACGGCAAAAATCTAGCCAATGCTGCAAGC 7 10262066 0.91261008 3 6 24 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 2L:10262057-10262100 6 6 17 FBgn0011305 436.02 51.88333333 79.38333333 0.013760837 0.115644073 0.075582616 -3 -3 -3 0.1 dme-miR-970-3p 6mer2-7 CTTATG 2L 10317344 10317349 + 2L_10317344_10317349_+ 0.999965354 0.999262771 0.999614062 0.000496813 CG4972 FBtr0079988 10317296 10317569 2L + 10317295 10317367 stop_codon CG4972 FlyBase G3754.1 TAGTAACAAAATGGTATTGAGTATAATATTGCGATTGCGAGTAGGGAAACTTATGTTCAAAATTATTTTTCAA 18 10317346 0.982012978 8 17 123 0.952380952 1.301029996 0 0.111111111 0.238095238 18 1 0 20 2L:10317295-10317367 6 CG4972 FBtr0079988 10317296 10317569 CTTATG 6mer2-7 dme-miR-970-3p 2L + 10317296 10317358 stop_codon CG4972 FlyBase G2969.1 AGTAACAAAATGGTATTGAGTATAATATTGCGATTGCGAGTAGGGAAACTTATGTTCAAAATT 18 10317345 0.981129209 4 16 118 0.769230769 1.301029996 0.115384615 0.333333333 0.538461538 18 6 0 20 2L:10317296-10317358 6 11.5 18 FBgn0032217 922.8633333 53.82666667 82.38666667 0.012461217 0.213648749 0.139585693 -2 -1 -1.5 0.1 dme-miR-252-5p 7mer-m1 TACTTAG 2L 10333024 10333030 + 2L_10333024_10333030_+ 0.604836215 0.69944066 0.652138438 0.066895483 CG5037 FBtr0079992 10332970 10333129 2L + 10332992 10333032 3'utr CG5037 FlyBase G3762.1 TAAAATGTTAAGTATCGTGTGAAATTTAAATATACTTAGTG 13 10333017 0.721435231 5 13 107 1 1.255272505 0.055555556 0.230769231 0.444444444 13 0 0 18 2L:10332992-10333032 7 CG5037 FBtr0079992 10332970 10333129 TACTTAG 7mer-m1 dme-miR-252-5p 2L + 10332992 10333044 3'utr CG5037 FlyBase G2976.1 TAAAATGTTAAGTATCGTGTGAAATTTAAATATACTTAGTGTTCTGCAACTTG 9 10333017 0.973890724 4 9 80 1 1.146128036 0.142857143 0.555555556 0.714285714 9 0 0 14 2L:10332992-10333044 7 6.5 19 FBgn0032222 148 12.22666667 18.69333333 0.043918919 0.531624864 0.347717546 7 7 7 0.1 dme-miR-92b-3p 7mer-m1 TGCAATT 2L 10338710 10338716 + 2L_10338710_10338716_+ 0.329160033 0.652225873 0.490692953 0.228442089 GATAd FBtr0333098 10338407 10339185 2L + 10338633 10338733 3'utr GATAd FlyBase G3782.1 AAATTGAACCAGTATGTCAAAACTTTTAAATAATATCACACTAAATATAGACCTTAAGAGAGGACATCAATACTTAATGCAATTAAATTAAAAATAAAATT 53 10338705 0.974643649 10 51 344 0.970588235 1.819543936 0.014705882 0.226415094 0.397058824 53 2 0 66 2L:10338633-10338733 7 GATAd FBtr0333098 10338407 10339185 TGCAATT 7mer-m1 dme-miR-92b-3p 2L + 10338676 10338727 3'utr GATAd FlyBase G2993.1 AATATAGACCTTAAGAGAGGACATCAATACTTAATGCAATTAAATTAAAAAT 30 10338706 0.668591608 6 26 203 0.787234043 1.568201724 0 0.333333333 0.574468085 30 10 0 37 2L:10338676-10338727 7 38 20 FBgn0032223 1151.333333 44.42 68.51 0.033005211 0.855470509 0.554663553 5 4 4.5 0.1 dme-miR-8-3p 7mer-m8 CAGTATT 2L 10338765 10338771 + 2L_10338765_10338771_+ 0.661615203 0.661615193 0.661615198 0 GATAd FBtr0333098 10338407 10339185 2L + 10338740 10338788 3'utr GATAd FlyBase G3783.1 ATTTATATTTATTAAAACCATTTTACAGTATTTTTAATTTTTTAATAAC 17 10338762 0.770127933 7 15 206 0.952380952 1.301029996 0 0.176470588 0.333333333 17 1 0 20 2L:10338740-10338788 7 GATAd FBtr0333098 10338407 10339185 CAGTATT 7mer-m8 dme-miR-8-3p 2L + 10338740 10338785 3'utr GATAd FlyBase G2994.1 ATTTATATTTATTAAAACCATTTTACAGTATTTTTAATTTTTTAAT 8 10338761 0.96382894 3 6 85 0.818181818 0.954242509 0 0.375 0.545454545 8 2 0 9 2L:10338740-10338785 7 11.5 21 FBgn0032223 1151.333333 44.42 68.51 0.009988419 0.258892391 0.167858707 3 4 3.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 10338915 10338921 + 2L_10338915_10338921_+ 0.753974861 0.753674361 0.753824611 0.000212486 GATAd FBtr0333098|FBtr0333098|FBtr0333098 10338407|10338407|10338407 10339185|10339185|10339185 2L + 10338870 10338942 3'utr GATAd FlyBase G3784.1 CTAAAAAATAATAATGTTTTAAATCTCTTGCCTATACGAAAATCATGTGATAATATAATAATCTCCACAAAAC 49 10338912 0.909228285 10 46 316 0.954545455 1.799340549 0 0.265306122 0.454545455 49 3 0 63 2L:10338870-10338942 7 GATAd FBtr0333098|FBtr0333098|FBtr0333098 10338407|10338407|10338407 10339185|10339185|10339185 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 10338819 10338939 3'utr GATAd FlyBase G2995.1 AGTTTTAACAATGATTTTTCAGCTGTCTTTGCAATTGAACAACTTCTAAAGCTAAAAAATAATAATGTTTTAAATCTCTTGCCTATACGAAAATCATGTGATAATATAATAATCTCCACAA 40 10338912 0.980032957 11 37 264 0.965517241 1.748188027 0 0.325 0.534482759 40 2 0 56 2L:10338819-10338939 7 37.5 22 FBgn0032223 1151.333333 44.42 68.51 0.032570932 0.844214318 0.547365348 3 3 3 0.1 dme-miR-980-5p 7mer-m1 AAAAACT 2L 10339034 10339040 + 2L_10339034_10339040_+ 0.765550005 0.765525822 0.765537913 1.71E-05 GATAd FBtr0333098 10338407 10339185 2L + 10339025 10339066 3'utr GATAd FlyBase G3786.1 AAGAAACTAAAAAACTTAATGCTGTTTTCGAATCTACATAAA 69 10339050 0.581312782 5 68 529 0.987654321 1.903089987 0.209876543 0.144927536 0.271604938 69 1 0 80 2L:10339025-10339066 7 GATAd FBtr0333098 10338407 10339185 AAAAACT 7mer-m1 dme-miR-980-5p 2L + 10339023 10339070 3'utr GATAd FlyBase G2997.1 ATAAGAAACTAAAAAACTTAATGCTGTTTTCGAATCTACATAAATTGT 53 10339051 0.584910985 4 53 410 1 1.84509804 0.171428571 0.226415094 0.414285714 53 0 0 70 2L:10339023-10339070 7 60 23 FBgn0032223 1151.333333 44.42 68.51 0.052113492 1.350742909 0.875784557 -16 -17 -16.5 0.1 dme-miR-968-5p 6mer3-8 ACTACT 2L 10363887 10363892 + 2L_10363887_10363892_+ 0.999963623 0.997758959 0.998861291 0.001558888 pim FBtr0332190|FBtr0080001 10363823|10363823 10364092|10364046 2L + 10363866 10363904 3'utr pim FlyBase G3806.1 TTTTTAGCTAGGTATCTTTGTACTACTAATTAATTATTT 28 10363884 0.718579863 6 28 292 1 1.591064607 0 0.285714286 0.487179487 28 0 0 39 2L:10363866-10363904 6 pim FBtr0332190|FBtr0080001 10363823|10363823 10364092|10364046 ACTACT 6mer3-8 dme-miR-968-5p 2L + 10363868 10363898 3'utr pim FlyBase G3010.1 TTTAGCTAGGTATCTTTGTACTACTAATTAA 20 10363884 0.719897473 2 18 197 0.931034483 1.130333768 0 0.35 0.551724138 20 1 1 27 2L:10363868-10363898 6 23.5 24 FBgn0003087 219.3333333 28.13666667 42.80666667 0.107142857 0.835209098 0.54897991 3 3 3 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 10364060 10364065 + 2L_10364060_10364065_+ 0.999945896 0.999997985 0.999971941 3.68E-05 pim FBtr0332190 10363823 10364092 2L + 10364038 10364103 3'utr pim FlyBase G3808.1 CAGGCAATTATATGTGTACGATGTACCTCGTTTGGAAGTGATTTTGAATTAAAGCAACTATAAAAA 170 10364080 0.682176502 10 166 1475 0.98206278 2.039414119 0.452914798 0.229411765 0.412556054 170 3 1 219 2L:10364038-10364103 6 pim FBtr0332190 10363823 10364092 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 10364046 10364096 3'utr pim FlyBase G3011.1 TATATGTGTACGATGTACCTCGTTTGGAAGTGATTTTGAATTAAAGCAACT 135 10364080 0.65506144 9 133 1183 0.990147783 2.303196057 0.428571429 0.37037037 0.581280788 135 2 0 201 2L:10364046-10364096 6 116.5 25 FBgn0003087 219.3333333 28.13666667 42.80666667 0.531155015 4.14050468 2.721538701 -20 -20 -20 0.1 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2L 10392262 10392267 + 2L_10392262_10392267_+ 0.968355117 0.999994964 0.98417504 0.022372788 da FBtr0332195|FBtr0332196|FBtr0080008 10392193|10392193|10392193 10393228|10392728|10392787 2L + 10392218 10392278 3'utr da FlyBase G3839.1 CTGGAAATCGTCGTCGTCCCTCTCTTCCATAAAAACCGAATGTATTGAAGGCTCCGCGGCC 11 10392258 0.854687359 7 9 56 0.933333333 1.146128036 0.066666667 0.181818182 0.4 11 1 0 14 2L:10392218-10392278 6 da FBtr0080008|FBtr0332195|FBtr0332196 10392193|10392193|10392193 10392787|10393228|10392728 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2L + 10392226 10392282 3'utr da FlyBase G3035.1 CGTCGTCGTCCCTCTCTTCCATAAAAACCGAATGTATTGAAGGCTCCGCGGCCAAGT 6 10392263 0.950861397 5 6 27 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2L:10392226-10392282 6 4 26 FBgn0000413 2154.396667 82.52666667 127.39 0.001856668 0.048469182 0.031399639 4 -1 1.5 0.1 dme-miR-1008-3p 6mer3-8 AGCTGT 2L 10392546 10392551 + 2L_10392546_10392551_+ 0.922385988 0.997627842 0.960006915 0.053203987 da FBtr0332195|FBtr0332196|FBtr0080008 10392193|10392193|10392193 10393228|10392728|10392787 2L + 10392533 10392593 3'utr da FlyBase G3840.2 AACGATTGTATATAGCTGTTCCATTACGTTTAACCTGGGAAGATCTTTTTCGTTTTTTAGA 39 10392556 0.786825866 8 37 356 0.976744186 1.62324929 0.162790698 0.102564103 0.186046512 39 1 0 42 2L:10392533-10392593 6 da FBtr0080008|FBtr0332195|FBtr0332196 10392193|10392193|10392193 10392787|10393228|10392728 AGCTGT 6mer3-8 dme-miR-1008-3p 2L + 10392510 10392603 3'utr da FlyBase G3036.1 ACACACAGAATTGCTCTTTTTAAAACGATTGTATATAGCTGTTCCATTACGTTTAACCTGGGAAGATCTTTTTCGTTTTTTAGAATGTTTGATT 28 10392556 0.987547413 8 28 246 1 1.633468456 0.139534884 0.392857143 0.604651163 28 0 0 43 2L:10392510-10392603 6 22.5 27 FBgn0000413 2154.396667 82.52666667 127.39 0.010443759 0.272639147 0.176622969 -10 -10 -10 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2L 10402800 10402805 + 2L_10402800_10402805_+ 1 1 1 0 Cnot4 FBtr0331638|FBtr0304112 10402769|10402769 10403206|10403206 2L + 10402746 10402832 stop_codon Cnot4 FlyBase G3859.1 TTTAAAAAGCCGTCAATTCGTTTAGCTACAATACATATAAATAATACATTTGTTTACCTGTACTCTTTATTAAATATTTCTTAAAGT 25 10402806 0.974140162 8 24 271 1 1.531478917 0 0.32 0.5 25 0 0 34 2L:10402746-10402832 6 Cnot4 FBtr0331638|FBtr0080014|FBtr0304112|FBtr0080013|FBtr0304113|FBtr0080010|FBtr0080012|FBtr0331639|FBtr0331637|FBtr0080009|FBtr0080011 10402769|10402769|10402769|10402769|10402769|10402769|10402769|10402769|10402769|10402769|10402769 10403206|10402882|10403206|10402882|10402882|10402882|10402882|10402882|10402882|10402882|10402882 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2L + 10402788 10402812 3'utr Cnot4 FlyBase G3051.1 AATACATTTGTTTACCTGTACTCTT 6 10402798 0.648814865 3 6 57 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2L:10402788-10402812 6 13.5 28 FBgn0051716 2626.393333 88.17666667 135.32 0.005140129 0.153101728 0.099763523 -6 2 -2 0.1 dme-miR-14-3p 6mer2-7 AGACTG 2L 10403152 10403157 + 2L_10403152_10403157_+ 0.799546245 0.99999981 0.899773027 0.1417421 Cnot4 FBtr0331638|FBtr0304112 10402769|10402769 10403206|10403206 2L + 10403120 10403161 3'utr Cnot4 FlyBase G3861.1 AGCAAAGAAAACCTCGTGATGTGAAATTATCGAGACTGTGTA 8 10403141 0.952754272 5 8 37 1 1.041392685 0.181818182 0.375 0.545454545 8 0 0 11 2L:10403120-10403161 6 Cnot4 FBtr0331638|FBtr0304112 10402769|10402769 10403206|10403206 AGACTG 6mer2-7 dme-miR-14-3p 2L + 10403126 10403171 3'utr Cnot4 FlyBase G3052.1 GAAAACCTCGTGATGTGAAATTATCGAGACTGTGTAAAAATGTCAA 9 10403147 0.97316529 6 9 55 1 1.079181246 0.083333333 0.222222222 0.416666667 9 0 0 12 2L:10403126-10403171 6 6 29 FBgn0051716 2626.393333 88.17666667 135.32 0.002284502 0.068045212 0.044339344 11 5 8 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 2L 104098 104104 - 2L_104098_104104_- 0.521223855 0.521223855 0.521223855 0 Nhe1 FBtr0301452 103960 104472 2L - 104079 104166 3'utr Nhe1 FlyBase G6295.1 AAAGCACACTACGTCAGTAATTTTAGTTAAAAATATTTATTCATACGAATATATGCTGTATTTGTGATTTTATACATTTTTGAAACCA 191 104105 0.992929741 16 182 2151 0.960869565 1.742332282 0.126086957 0.183246073 0.32173913 191 6 3 221 2L:104079-104166 7 Nhe1 FBtr0301452 103960 104472 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 104081 104130 3'utr Nhe1 FlyBase G4915.1 TTATTCATACGAATATATGCTGTATTTGTGATTTTATACATTTTTGAAAC 131 104105 0.595449411 9 123 1487 0.945355191 1.635986112 0.202185792 0.34351145 0.530054645 131 7 3 173 2L:104081-104130 7 155 30 FBgn0026787 273.9133333 13.01 19.93 0.565872417 11.91391238 7.777220271 1 1 1 0.1 dme-miR-7-5p 6mer3-8 GTCTTC 2L 104190 104195 - 2L_104190_104195_- 0.999946817 0.999938976 0.999942896 5.52E-06 Nhe1 FBtr0301452 103960 104472 2L - 104169 104258 3'utr Nhe1 FlyBase G6296.1 TCGTATCACTGTAGCTCCTTTATTAATCCGCTTAAAGCAGTATTACATTGCACACGACAGATGGTCTTCAAAATGAAAATTTGGACGTCA 12 104197 0.985675634 8 11 81 0.875 1.146128036 0 0.333333333 0.5 12 2 0 14 2L:104169-104258 6 Nhe1 FBtr0301452 103960 104472 GTCTTC 6mer3-8 dme-miR-7-5p 2L - 104168 104258 3'utr Nhe1 FlyBase G4916.1 TCGTATCACTGTAGCTCCTTTATTAATCCGCTTAAAGCAGTATTACATTGCACACGACAGATGGTCTTCAAAATGAAAATTTGGACGTCAC 19 104197 0.971953748 7 17 132 0.961538462 1.397940009 0.230769231 0.368421053 0.538461538 19 1 0 25 2L:104168-104258 6 7 31 FBgn0026787 273.9133333 13.01 19.93 0.025555529 0.538047656 0.351229303 2 2 2 0.1 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2L 10420 10425 - 2L_10420_10425_- 0.647979509 0.999864737 0.823922123 0.248820411 l(2)gl FBtr0078168|FBtr0306591|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0306590|FBtr0078170|FBtr0330655|FBtr0078171|FBtr0306592|FBtr0078166 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11214|11214|11214|11214|11309|11214|11214|11214 2L - 10403 10480 3'utr l(2)gl FlyBase G6259.2 AACAAATTAGGAGTACAAAAAATAGCCTGATGCAAGGATGGGGAGAAAAAAGACCTTGAAGTTCAAAAGAATTTGTTG 69 10424 0.923055201 8 68 224 0.987341772 1.892094603 0.113924051 0.144927536 0.253164557 69 1 0 78 2L:10403-10480 6 l(2)gl FBtr0306592|FBtr0306590|FBtr0078166|FBtr0330655|FBtr0078171|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0078170|FBtr0078168|FBtr0306591 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11309|11214|11214|11214|11214|11214|11214|11214 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2L - 10385 10476 3'utr l(2)gl FlyBase G4881.1 AATTAGGAGTACAAAAAATAGCCTGATGCAAGGATGGGGAGAAAAAAGACCTTGAAGTTCAAAAGAATTTGTTGTATCAAATCCTCAATAAG 40 10424 0.949488326 7 35 153 0.875 1.748188027 0.15625 0.45 0.65625 40 8 0 56 2L:10385-10476 6 25.5 32 FBgn0002121 6538.69 148.3266667 227.85 0.003899864 0.171917839 0.111915734 -1 -1 -1 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2L 10420744 10420750 - 2L_10420744_10420750_- 0.661603293 0.661585574 0.661594433 1.25E-05 pie FBtr0080046|FBtr0333490 10420709|10420623 10420827|10420827 2L - 10420726 10420774 3'utr pie FlyBase G9792.1 GTGGGAATTAATTCGTCATAGAATTCTAGTCTCTTTATGCATATATTGT 81 10420751 0.823378966 6 80 765 1 1.991226076 0.112244898 0.185185185 0.326530612 81 0 0 98 2L:10420726-10420774 7 pie FBtr0080046|FBtr0333490 10420709|10420623 10420827|10420827 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2L - 10420739 10420774 3'utr pie FlyBase G7582.1 GTGGGAATTAATTCGTCATAGAATTCTAGTCTCTTT 66 10420751 0.820491423 3 63 577 0.965909091 1.929418926 0.170454545 0.257575758 0.443181818 66 3 0 85 2L:10420739-10420774 7 72 33 FBgn0005683 197.3333333 11.90333333 18.10333333 0.364864865 6.048725847 3.977168109 1 1 1 0.1 dme-miR-317-5p 6mer3-8 GTATCC 2L 10428292 10428297 + 2L_10428292_10428297_+ 0.999961454 0.999977046 0.99996925 1.10E-05 KdelR FBtr0080023 10427808 10428632 2L + 10428271 10428373 3'utr KdelR FlyBase G3892.1 TAAATAGCTCTTAAGTCGACTGTATCCTAAAAATCCGAGTAAAGTTAAGTCTTATTGTGTGGCTAATAGTAAAGTAAATGATGAGCGATGTCAACATATAATA 36 10428293 0.738596182 13 34 268 0.930232558 1.602059991 0.093023256 0.166666667 0.302325581 36 3 0 40 2L:10428271-10428373 6 KdelR FBtr0080023 10427808 10428632 GTATCC 6mer3-8 dme-miR-317-5p 2L + 10428260 10428350 3'utr KdelR FlyBase G3080.1 AAGTTATGCATTAAATAGCTCTTAAGTCGACTGTATCCTAAAAATCCGAGTAAAGTTAAGTCTTATTGTGTGGCTAATAGTAAAGTAAATG 24 10428293 0.982830603 8 22 170 0.96969697 1.204119983 0.090909091 0.291666667 0.484848485 24 0 1 32 2L:10428260-10428350 6 18 34 FBgn0267330 1541.713333 135.1766667 206.4166667 0.011675322 0.133159076 0.087202261 -1 -1 -1 0.1 dme-miR-283-5p 7mer-A1 GATATTA 2L 10428606 10428612 + 2L_10428606_10428612_+ 0.782744175 0.782743888 0.782744031 2.12E-07 KdelR FBtr0080023 10427808 10428632 2L + 10428585 10428622 3'utr KdelR FlyBase G3894.1 AATATTTTAAACACTTTTGCAGATATTATATTATAAAC 14 10428601 0.755408105 4 13 142 0.944444444 1.230448921 0 0.214285714 0.388888889 14 1 0 17 2L:10428585-10428622 7 KdelR FBtr0080023 10427808 10428632 GATATTA 7mer-A1 dme-miR-283-5p 2L + 10428585 10428628 3'utr KdelR FlyBase G3083.1 AATATTTTAAACACTTTTGCAGATATTATATTATAAACAAAGTA 13 10428601 0.768237436 4 13 135 1 1.113943352 0 0 0 13 0 0 13 2L:10428585-10428628 7 13.5 35 FBgn0267330 1541.713333 135.1766667 206.4166667 0.008756492 0.099869307 0.065401696 5 5 5 0.1 dme-miR-307a-3p 6mer3-8 GGTTGT 2L 104322 104327 - 2L_104322_104327_- 0.999992731 0.999980975 0.999986853 8.27E-06 Nhe1 FBtr0301452 103960 104472 2L - 104304 104382 3'utr Nhe1 FlyBase G6297.1 GCTTAAGTTCCTCTAGTTAATATTTTTAGAGTTTTTATTTATATAGCGCGGTGATGGTTGTTATCTTGTGTATATTTTT 70 104328 0.797996234 12 69 647 0.988372093 1.929418926 0.127906977 0.185714286 0.337209302 70 1 0 85 2L:104304-104382 6 Nhe1 FBtr0301452 103960 104472 GGTTGT 6mer3-8 dme-miR-307a-3p 2L - 104306 104353 3'utr Nhe1 FlyBase G4917.1 AGTTTTTATTTATATAGCGCGGTGATGGTTGTTATCTTGTGTATATTT 56 104328 0.792436769 6 53 482 0.952380952 1.903089987 0.047619048 0.303571429 0.535714286 56 4 0 80 2L:104306-104353 6 60.5 36 FBgn0026787 273.9133333 13.01 19.93 0.220872782 4.650269024 3.035624686 1 1 1 0.1 dme-miR-307a-3p 6mer2-7 GTTGTG 2L 104454 104459 - 2L_104454_104459_- 0.987599944 0.995964906 0.991782425 0.005914948 Nhe1 FBtr0301452 103960 104472 2L - 104394 104539 stop_codon Nhe1 FlyBase G6298.1 AGATGAATCGGACGAAGAGATAGGACTAGCGGCCAGCACAAGTCAAATTCATTTGACACGGTCGTAGGGATTAAATGGCTGTTGTGGGGGGAGCTCTGTATCCGTTTCGGACTGTGTTGGATAACTTTAGAAGCCAAAGGGAACGA 125 104464 0.982869808 19 117 885 0.929078014 1.640150041 0.304964539 0.12 0.219858156 125 8 2 131 2L:104394-104539 6 Nhe1 FBtr0301452 103960 104472 GTTGTG 6mer2-7 dme-miR-307a-3p 2L - 104410 104536 stop_codon Nhe1 FlyBase G4918.1 TGAATCGGACGAAGAGATAGGACTAGCGGCCAGCACAAGTCAAATTCATTTGACACGGTCGTAGGGATTAAATGGCTGTTGTGGGGGGAGCTCTGTATCCGTTTCGGACTGTGTTGGATAACTTTAG 84 104464 0.996801461 18 80 521 0.964028777 1.649983544 0.309352518 0.511904762 0.705035971 84 3 2 134 2L:104410-104536 6 67.5 37 FBgn0026787 273.9133333 13.01 19.93 0.246428311 5.188316679 3.386853989 5 5 5 0.1 dme-miR-184-3p 6mer3-8 TCCGTC 2L 1050415 1050420 - 2L_1050415_1050420_- 0.999826902 0.999834205 0.999830553 5.16E-06 S FBtr0077993 1049672 1052037 2L - 1050339 1050438 3'utr S FlyBase G6716.1 TCAGTTACCACACTCGAATCCGTCACAAGAAGAACTATAGAATCGCGACTAAATCACAAACATCACCTTAGTCTAAGTACAGTGCTAATGTCTGTTTTTT 14 1050420 0.957748288 5 11 56 0.894736842 1.230448921 0 0.285714286 0.473684211 14 2 0 17 2L:1050339-1050438 6 S FBtr0077993 1049672 1052037 TCCGTC 6mer3-8 dme-miR-184-3p 2L - 1050360 1050444 3'utr S FlyBase G5252.1 AGTTACTCAGTTACCACACTCGAATCCGTCACAAGAAGAACTATAGAATCGCGACTAAATCACAAACATCACCTTAGTCTAAGTA 10 1050420 0.940524828 5 10 39 1 1.176091259 0.133333333 0.4 0.6 10 0 0 15 2L:1050360-1050444 6 6.5 38 FBgn0003310 666.94 15.53666667 23.95 0.009746004 0.418365158 0.271398747 0 0 0 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 10507952 10507959 - 2L_10507952_10507959_- 0.65016441 0.647755367 0.648959888 0.00170342 CG7384 FBtr0080135|FBtr0080135|FBtr0080135 10507857|10507857|10507857 10508086|10508086|10508086 2L - 10507919 10507969 3'utr CG7384 FlyBase G9821.1 CGTACAGAATCTGTGATAGTGCTAACCTGCAATGGCGTCCATAGCATAGTT 8 10507960 0.973488317 3 8 48 1 1.079181246 0.083333333 0.25 0.5 8 0 0 12 2L:10507919-10507969 8 CG7384 FBtr0080135|FBtr0080135|FBtr0080135 10507857|10507857|10507857 10508086|10508086|10508086 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 10507919 10507969 3'utr CG7384 FlyBase G7601.1 CGTACAGAATCTGTGATAGTGCTAACCTGCAATGGCGTCCATAGCATAGTT 6 10507937 0.869989424 2 4 38 0.666666667 0.77815125 0.333333333 0.5 0.666666667 6 3 0 6 2L:10507919-10507969 8 5.5 39 FBgn0032262 8.333333333 0.46 0.726666667 0.66 11.95652174 7.568807339 1 -22 -10.5 0.1 dme-miR-12-5p 7mer-A1 ATACTCA 2L 1051106 1051112 - 2L_1051106_1051112_- 0.823349561 0.823349562 0.823349562 0 S FBtr0077993 1049672 1052037 2L - 1051094 1051137 3'utr S FlyBase G6717.1 GCAAAATCTGCTTTCAACTCATCTCATACTCATAGTTACAACAT 16 1051111 0.743541404 5 15 139 0.941176471 1.204119983 0.235294118 0.0625 0.117647059 16 1 0 16 2L:1051094-1051137 7 S FBtr0077993 1049672 1052037 ATACTCA 7mer-A1 dme-miR-12-5p 2L - 1051099 1051138 3'utr S FlyBase G5253.1 TGCAAAATCTGCTTTCAACTCATCTCATACTCATAGTTAC 8 1051118 0.68791422 4 8 74 1 1.204119983 0 0.625 0.8125 8 0 0 16 2L:1051099-1051138 7 12 40 FBgn0003310 666.94 15.53666667 23.95 0.017992623 0.772366445 0.501043841 -1 6 2.5 0.1 dme-miR-33-5p 8mer-m1 CAATGCAC 2L 10511504 10511511 - 2L_10511504_10511511_- 0.662435351 0.652710947 0.657573149 0.00687626 Fatp FBtr0337007|FBtr0080134|FBtr0080133|FBtr0337006 10511251|10510670|10511251|10511251 10511666|10511666|10511666|10511666 2L - 10511486 10511560 3'utr Fatp FlyBase G9823.1 AGATCATTCAGCCTAGGAGAGATGCATCCGAAGCACATTTCCATGTCAACAATGCACTTTTGTATATCGTAAGCA 16 10511504 0.764814363 9 16 102 1 1.230448921 0 0.0625 0.117647059 16 0 0 17 2L:10511486-10511560 8 Fatp FBtr0337007|FBtr0080134|FBtr0080133|FBtr0337006 10511251|10510670|10511251|10511251 10511666|10511666|10511666|10511666 CAATGCAC 8mer-m1 dme-miR-33-5p 2L - 10511485 10511555 3'utr Fatp FlyBase G7603.1 ATTCAGCCTAGGAGAGATGCATCCGAAGCACATTTCCATGTCAACAATGCACTTTTGTATATCGTAAGCAT 8 10511502 0.978195974 7 8 51 1 1.079181246 0.25 0.25 0.5 8 0 0 12 2L:10511485-10511555 8 8 41 FBgn0021953 551.6433333 26.14666667 40.02666667 0.014502124 0.305966344 0.199866755 -7 -9 -8 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 10534 10540 - 2L_10534_10540_- 0.801970372 0.801970393 0.801970383 0 l(2)gl FBtr0078168|FBtr0078168|FBtr0078168|FBtr0306591|FBtr0306591|FBtr0306591|FBtr0078169|FBtr0078169|FBtr0078169|FBtr0078167|FBtr0078167|FBtr0078167|FBtr0306589|FBtr0306589|FBtr0306589|FBtr0306590|FBtr0306590|FBtr0306590|FBtr0078170|FBtr0078170|FBtr0078170|FBtr0330655|FBtr0330655|FBtr0330655|FBtr0078171|FBtr0078171|FBtr0078171|FBtr0306592|FBtr0306592|FBtr0306592|FBtr0078166|FBtr0078166|FBtr0078166 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11309|11309|11309|11214|11214|11214|11214|11214|11214|11214|11214|11214 2L - 10484 10562 3'utr l(2)gl FlyBase G6260.1 CTTTTATTTTCGGTTAAAATATTGTGATACAAAAAAATGCCCTTACAAAATTAGGACAACAACAATTTGCTTTATTATG 220 10541 0.852784174 12 203 1415 0.926199262 1.195553739 0.520295203 0.195454545 0.346863469 220 5 15 251 2L:10484-10562 7 l(2)gl FBtr0306592|FBtr0306592|FBtr0306592|FBtr0306590|FBtr0306590|FBtr0306590|FBtr0078166|FBtr0078166|FBtr0078166|FBtr0330655|FBtr0330655|FBtr0330655|FBtr0078171|FBtr0078171|FBtr0078171|FBtr0078169|FBtr0078169|FBtr0078169|FBtr0078167|FBtr0078167|FBtr0078167|FBtr0306589|FBtr0306589|FBtr0306589|FBtr0078170|FBtr0078170|FBtr0078170|FBtr0078168|FBtr0078168|FBtr0078168|FBtr0306591|FBtr0306591|FBtr0306591 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11214|11214|11214|11214|11214|11214|11309|11309|11309|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 10513 10561 3'utr l(2)gl FlyBase G4883.1 TTTTATTTTCGGTTAAAATATTGTGATACAAAAAAATGCCCTTACAAAA 112 10541 0.695107335 6 103 724 0.909090909 1.273001272 0.557575758 0.357142857 0.563636364 112 8 7 150 2L:10513-10561 7 154 42 FBgn0002121 6538.69 148.3266667 227.85 0.023552118 1.03824891 0.675883257 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 10686409 10686414 - 2L_10686409_10686414_- 0.999910918 0.999998744 0.999954831 6.21E-05 CG7296 FBtr0336850|FBtr0336850|FBtr0336850|FBtr0080129|FBtr0080129|FBtr0080129 10686122|10686122|10686122|10686389|10686389|10686389 10686461|10686461|10686461|10686461|10686461|10686461 2L - 10686390 10686438 3'utr CG7296 FlyBase G9830.1 TTGGAGTTAAGCGATAAGAAATGACTGTGAATAAAACCTAAATAAATTA 71 10686417 0.875728737 5 71 317 1 1.886490725 0.272727273 0.056338028 0.12987013 71 0 0 77 2L:10686390-10686438 6 CG7296 FBtr0336850|FBtr0336850|FBtr0336850|FBtr0080129|FBtr0080129|FBtr0080129 10686122|10686122|10686122|10686389|10686389|10686389 10686461|10686461|10686461|10686461|10686461|10686461 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 10686395 10686438 3'utr CG7296 FlyBase G7608.1 TTGGAGTTAAGCGATAAGAAATGACTGTGAATAAAACCTAAATA 41 10686417 0.836218124 4 40 176 0.981481481 1.72427587 0.185185185 0.243902439 0.425925926 41 1 0 53 2L:10686395-10686438 6 56 43 FBgn0032283 0 0 0 Inf Inf Inf 3 3 3 0.1 dme-miR-1003-3p 6mer2-7 TGTGAG 2L 10740454 10740459 + 2L_10740454_10740459_+ 0.999996557 0.999993876 0.999995217 1.91E-06 CG12299 FBtr0080113 10740097 10740762 2L + 10740437 10740471 3'utr CG12299 FlyBase G3948.1 AAGATCAAAAGCGATTTTGTGAGCATTCCCAGTAC 9 10740453 0.674570334 2 9 62 1 1 0.1 0.111111111 0.2 9 0 0 10 2L:10740437-10740471 6 CG12299 FBtr0080113 10740097 10740762 TGTGAG 6mer2-7 dme-miR-1003-3p 2L + 10740431 10740469 3'utr CG12299 FlyBase G3121.1 AATCATAAGATCAAAAGCGATTTTGTGAGCATTCCCAGT 7 10740452 0.904794193 3 6 46 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 2L:10740431-10740469 6 8 44 FBgn0032295 396.6833333 14.49 22.2 0.02016722 0.5521049 0.36036036 1 2 1.5 0.1 dme-miR-190-5p 7mer-A1 CATATCA 2L 10740523 10740529 + 2L_10740523_10740529_+ 0.782911728 0.741123195 0.762017462 0.029548932 CG12299 FBtr0080113 10740097 10740762 2L + 10740472 10740587 3'utr CG12299 FlyBase G3949.1 AACTTGTGGCACATTTTGGGCAACCGAAAGCGAAATTCCAGTTTTGTATCTCATATCACACGAAGCCCACACGACTAAAGAAGATTGTCCAGGAAATGGACGTATTGTATTTGCAT 9 10740515 0.98653024 7 9 73 1 0.954242509 0.111111111 0 0 9 0 0 9 2L:10740472-10740587 7 CG12299 FBtr0080113 10740097 10740762 CATATCA 7mer-A1 dme-miR-190-5p 2L + 10740503 10740585 3'utr CG12299 FlyBase G3122.1 GAAATTCCAGTTTTGTATCTCATATCACACGAAGCCCACACGACTAAAGAAGATTGTCCAGGAAATGGACGTATTGTATTTGC 10 10740515 0.857128547 6 10 66 1 1.079181246 0.25 0.2 0.333333333 10 0 0 12 2L:10740503-10740585 7 4 45 FBgn0032295 396.6833333 14.49 22.2 0.01008361 0.27605245 0.18018018 8 8 8 0.1 dme-miR-1002-5p 6mer3-8 CTACTT 2L 10740628 10740633 + 2L_10740628_10740633_+ 0.742024785 0.760626169 0.751325477 0.013153176 CG12299 FBtr0080113 10740097 10740762 2L + 10740607 10740649 3'utr CG12299 FlyBase G3950.1 ACATTTTGTTAGTATTAAGCCCTACTTTATGCTGCTCATTTTA 29 10740635 0.956028688 5 29 284 1 1.505149978 0 0.103448276 0.1875 29 0 0 32 2L:10740607-10740649 6 CG12299 FBtr0080113 10740097 10740762 CTACTT 6mer3-8 dme-miR-1002-5p 2L + 10740616 10740675 3'utr CG12299 FlyBase G3123.1 TAGTATTAAGCCCTACTTTATGCTGCTCATTTTACATCCCAAGGGATATACCCTTACCCA 30 10740635 0.989750407 8 30 290 1 1.698970004 0.04 0.5 0.7 30 0 0 50 2L:10740616-10740675 6 28.5 46 FBgn0032295 396.6833333 14.49 22.2 0.071845721 1.966873706 1.283783784 -7 -7 -7 0.1 dme-miR-33-5p 7mer-A1 AATGCAA 2L 1082999 1083005 + 2L_1082999_1083005_+ 0.71094842 0.689034904 0.699991662 0.015495184 Atg4a FBtr0332569|FBtr0077953 1082870|1082870 1085380|1083378 2L + 1082920 1083064 3'utr Atg4a FlyBase G955.1 AGCCCAGCCAGGCGAAAGTGGAGCACCCAATGAGGAGAAAGAGAGTGGGCCGGGAGGTCGAGCCCCTGCGGATGCTGCGAATGCAATAAACTAAGGCTAAAGTGCATAATTAGACGAGTGGTTGAGATTTAGATTTTAGTATGTT 70 1083011 0.962291889 14 68 345 0.975609756 1.602059991 0.268292683 0.157142857 0.280487805 70 1 1 80 2L:1082920-1083064 7 Atg4a FBtr0077953|FBtr0332569 1082870|1082870 1083378|1085380 AATGCAA 7mer-A1 dme-miR-33-5p 2L + 1082923 1083062 3'utr Atg4a FlyBase G769.1 CCAGCCAGGCGAAAGTGGAGCACCCAATGAGGAGAAAGAGAGTGGGCCGGGAGGTCGAGCCCCTGCGGATGCTGCGAATGCAATAAACTAAGGCTAAAGTGCATAATTAGACGAGTGGTTGAGATTTAGATTTTAGTATG 37 1083011 0.962104287 12 34 165 0.945454545 1.414973348 0.418181818 0.351351351 0.563636364 37 2 1 52 2L:1082923-1083062 7 34.5 47 FBgn0031298 484.5333333 26.74 40.88333333 0.071202532 1.290201945 0.843864656 -12 -12 -12 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 2L 10837965 10837971 - 2L_10837965_10837971_- 0.521055821 0.521084347 0.521070084 2.02E-05 CG6700 FBtr0301710|FBtr0080187 10837858|10837730 10839315|10839315 2L - 10837942 10837983 3'utr CG6700 FlyBase G9857.1 TATTAGAGGGAGTGTGATTAGAATCCTAACTATTATATTAAA 35 10837965 0.769002304 4 32 261 0.928571429 1.290034611 0.142857143 0.2 0.333333333 35 2 1 39 2L:10837942-10837983 7 CG6700 FBtr0301710|FBtr0080187 10837858|10837730 10839315|10839315 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 10837945 10837989 3'utr CG6700 FlyBase G7624.1 TATTTTTATTAGAGGGAGTGTGATTAGAATCCTAACTATTATATT 34 10837965 0.724236145 5 33 229 0.980769231 1.707570176 0.115384615 0.411764706 0.615384615 34 1 0 51 2L:10837945-10837989 7 34 48 FBgn0032305 1004.78 26.73333333 40.84666667 0.033838253 1.271820449 0.832381263 -6 -6 -6 0.1 dme-miR-7-5p 7mer-m8 GTCTTCC 2L 10838165 10838171 - 2L_10838165_10838171_- 0.705950257 0.705950312 0.705950284 0 CG6700 FBtr0301710|FBtr0080187 10837858|10837730 10839315|10839315 2L - 10838145 10838225 3'utr CG6700 FlyBase G9859.1 CAAAATTATCGGAAGTTCAAACTCAACGTTTTGGAGTATGGCAAATTCAACCTGGTCTTCCCCGTCGCCACTAAACATCCG 14 10838168 0.695837135 6 13 83 0.875 1.146128036 0.0625 0.142857143 0.25 14 2 0 14 2L:10838145-10838225 7 CG6700 FBtr0301710|FBtr0080187 10837858|10837730 10839315|10839315 GTCTTCC 7mer-m8 dme-miR-7-5p 2L - 10838148 10838198 3'utr CG6700 FlyBase G7625.1 GTTTTGGAGTATGGCAAATTCAACCTGGTCTTCCCCGTCGCCACTAAACAT 8 10838168 0.977616939 2 8 61 1 1.041392685 0.090909091 0.25 0.454545455 8 0 0 11 2L:10838148-10838198 7 9 49 FBgn0032305 1004.78 26.73333333 40.84666667 0.008957185 0.336658354 0.220336217 -3 -3 -3 0.1 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 2L 10839257 10839264 - 2L_10839257_10839264_- 0.674982057 0.674982051 0.674982054 0 CG6700 FBtr0301710|FBtr0080187 10837858|10837730 10839315|10839315 2L - 10839045 10839288 3'utr CG6700 FlyBase G9865.1 TGGCATGAAGCCCTATTCGATTTTGTACCTGATTTCCGAGCTTTTCGGATGTTAGTGTCCTTTTTCGGACTGCGGATGCAACTCTCTTGGCCCTGTTTAAAAATTTGTGTATATATTTCTCTAGATCGCGATTCCCTTTCGTTACAAAGTTAGGACTTGAATTACTCCCATTCTTAGGCTGAAGTCTTCGCTTATTTAGGACCAACTGTTCTTCGTAGGGTTTAAAGTTTTTAGATGGAAAATA 304 10839265 0.988364088 32 297 2794 0.980874317 2.254064453 0.163934426 0.174342105 0.31420765 304 6 1 359 2L:10839045-10839288 8 CG6700 FBtr0301710|FBtr0080187 10837858|10837730 10839315|10839315 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2L - 10839237 10839283 3'utr CG6700 FlyBase G7631.1 TGAAGCCCTATTCGATTTTGTACCTGATTTCCGAGCTTTTCGGATGT 116 10839265 0.699534517 11 113 1170 0.971428571 2.230448921 0.177142857 0.379310345 0.588571429 116 5 0 170 2L:10839237-10839283 8 137.5 50 FBgn0032305 1004.78 26.73333333 40.84666667 0.136845877 5.143391521 3.366247756 1 1 1 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA 2L 10847252 10847259 - 2L_10847252_10847259_- 0.615870311 0.619576112 0.617723211 0.002620396 porin FBtr0080183|FBtr0305260 10847225|10847225 10847867|10847867 2L - 10847237 10847272 3'utr porin FlyBase G9878.1 TACCTTTTCGTTGTGCATTTACCTGAGAAATAAATC 26 10847255 0.730343129 3 26 191 1 1.602059991 0.275 0.346153846 0.575 26 0 0 40 2L:10847237-10847272 8 porin FBtr0305260|FBtr0080183 10847225|10847225 10847867|10847867 TGCATTTA 8mer-A1 dme-miR-277-3p 2L - 10847242 10847278 3'utr porin FlyBase G7636.1 AATCTTTACCTTTTCGTTGTGCATTTACCTGAGAAAT 17 10847255 0.742718784 3 17 139 1 1.361727836 0.347826087 0.352941176 0.52173913 17 0 0 23 2L:10847242-10847278 8 21.5 51 FBgn0004363 5030.653333 426.6133333 653.96 0.004273799 0.050396925 0.032876629 -4 -4 -4 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2L 10854658 10854663 - 2L_10854658_10854663_- 0.99955666 0.999686896 0.999621778 9.21E-05 Dnz1 FBtr0080181 10854433 10855186 2L - 10854620 10854746 3'utr Dnz1 FlyBase G9890.1 AATACTACATAGCAATATGTACCGAGCTAGAAACTAAGTCCTTATCAAAAGCATTTACGATATACCCGAAGAATGACGCATATACCAAAAAGGAAATAAAACGGAGATTAAACACTCAAATAGAAAA 31 10854664 0.952298384 10 30 99 0.974358974 1.579783597 0.230769231 0.225806452 0.384615385 31 1 0 38 2L:10854620-10854746 6 Dnz1 FBtr0080181 10854433 10855186 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 10854634 10854679 3'utr Dnz1 FlyBase G7644.1 GAAGAATGACGCATATACCAAAAAGGAAATAAAACGGAGATTAAAC 9 10854664 0.872682275 3 9 18 1 1.041392685 0.272727273 0.111111111 0.272727273 9 0 0 11 2L:10854634-10854679 6 13 52 FBgn0027453 422.0233333 26.38 40.35333333 0.030803984 0.492797574 0.322154304 1 1 1 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 2L 10855091 10855097 - 2L_10855091_10855097_- 0.520403969 0.521216798 0.520810383 0.000574736 Dnz1 FBtr0080181 10854433 10855186 2L - 10855047 10855165 3'utr Dnz1 FlyBase G9892.1 TTTTGTCCTTGCGTTTGCTGTGCGGCTAAAAGAGCCCCCGAGTGTTTTTAGTTTTTAATCAATGTGTGTGTGATTATTTTTAAACGACCTATCCCCCTGCCCGCAGCCAGTCAAATTGA 26 10855100 0.988266237 12 25 231 0.965517241 1.447158031 0.103448276 0.076923077 0.172413793 26 1 0 28 2L:10855047-10855165 7 Dnz1 FBtr0080181 10854433 10855186 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 10855060 10855120 3'utr Dnz1 FlyBase G7646.1 TTTTAGTTTTTAATCAATGTGTGTGTGATTATTTTTAAACGACCTATCCCCCTGCCCGCAG 18 10855101 0.922126064 6 15 167 0.884615385 1.361727836 0.038461538 0.222222222 0.461538462 18 3 0 23 2L:10855060-10855120 7 11.5 53 FBgn0027453 422.0233333 26.38 40.35333333 0.027249678 0.435936315 0.284982653 3 4 3.5 0.1 dme-miR-277-3p 6mer3-8 TGCATT 2L 10856854 10856859 - 2L_10856854_10856859_- 0.999999995 0.999999992 0.999999994 0 aurB FBtr0080180 10856795 10856872 2L - 10856827 10856865 3'utr aurB FlyBase G9895.1 CGAGTTTGCATTGTGTAACGACTTATTTCAGATTTTACT 15 10856852 0.681237911 6 14 134 0.944444444 1.230448921 0.833333333 0.133333333 0.277777778 15 1 0 17 2L:10856827-10856865 6 aurB FBtr0080180 10856795 10856872 TGCATT 6mer3-8 dme-miR-277-3p 2L - 10856828 10856864 3'utr aurB FlyBase G7648.1 GAGTTTGCATTGTGTAACGACTTATTTCAGATTTTAC 9 10856839 0.898906544 5 7 91 0.785714286 1.041392685 0.357142857 0.444444444 0.642857143 9 3 0 11 2L:10856828-10856864 6 9 54 FBgn0024227 390.6033333 40.1 60.70333333 0.023041278 0.224438903 0.148262039 -7 -20 -13.5 0.1 dme-miR-980-3p 6mer2-7 GCAGCT 2L 10965554 10965559 - 2L_10965554_10965559_- 0.99999422 0.994798741 0.99739648 0.003673773 CG33129 FBtr0080172|FBtr0340551|FBtr0080171|FBtr0340550|FBtr0080170|FBtr0340552|FBtr0080169 10964903|10964903|10964903|10964903|10964903|10964903|10965138 10965604|10965604|10965604|10965604|10965604|10965604|10965604 2L - 10965507 10965676 stop_codon CG33129 FlyBase G9910.1 ACGCGTAACGCCGCCCTGGAGTACTACAACCAGTTTCACAAAAAGGTCGACGCATACGCCAAGCTCAAATGATTTTAAGCGTCAGGAACGCTTACTTCTCGAACAGCAACATCATCAGCAGCTGCAGCAGATGCAAACAGAATACGCGTCATAGTAAATAGTGAAGGAAG 30 10965562 0.943828422 13 28 112 0.947368421 1.079181246 0.184210526 0.266666667 0.421052632 30 0 2 36 2L:10965507-10965676 6 CG33129 FBtr0080171|FBtr0340551|FBtr0080172|FBtr0080169|FBtr0340552|FBtr0080170|FBtr0340550 10964903|10964903|10964903|10965138|10964903|10964903|10964903 10965604|10965604|10965604|10965604|10965604|10965604|10965604 GCAGCT 6mer2-7 dme-miR-980-3p 2L - 10965499 10965564 3'utr CG33129 FlyBase G7660.1 CATCAGCAGCTGCAGCAGATGCAAACAGAATACGCGTCATAGTAAATAGTGAAGGAAGCCCTAATT 14 10965534 0.953158582 5 11 52 0.777777778 1.146128036 0.166666667 0.214285714 0.388888889 14 4 0 14 2L:10965499-10965564 6 6 55 FBgn0053129 1429.696667 81.02 123.6933333 0.004196694 0.074055789 0.04850706 3 -25 -11 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2L 10981725 10981731 + 2L_10981725_10981731_+ 0.805574107 0.823290568 0.814432338 0.012527457 SCAR FBtr0305255|FBtr0305256|FBtr0329949|FBtr0340223|FBtr0080148 10981664|10981664|10981664|10981664|10981664 10982293|10982395|10982395|10982395|10981854 2L + 10981708 10981770 stop_codon SCAR FlyBase G3987.1 AAAAAGAAGAAGTAATTCCAAAGAGAATTAATCCATACGATGGTCGAAACCAAGCGTGGTATG 64 10981723 0.685091898 4 63 203 0.987654321 1.903089987 0.086419753 0.203125 0.37037037 64 1 0 80 2L:10981708-10981770 7 SCAR FBtr0329949|FBtr0305255|FBtr0340223|FBtr0305256 10981664|10981664|10981664|10981664 10982395|10982293|10982395|10982395 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2L + 10981622 10981768 stop_codon SCAR FlyBase G3146.1 ACGACAGCGAGGGCTGGATGGAACCGAACGAAACATCGGCTTGATCCCTGATTAACTCGTTAAAGCCTGACATAATTCTAAAAAACAAAAAGAAGAAGTAATTCCAAAGAGAATTAATCCATACGATGGTCGAAACCAAGCGTGGTA 49 10981723 0.934655962 9 48 182 1 1.880813592 0.026315789 0.408163265 0.618421053 49 0 0 76 2L:10981622-10981768 7 49 56 FBgn0041781 1138.273333 48.57333333 74.31 0.043047657 1.008783969 0.659399812 2 2 2 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 2L 10981930 10981936 + 2L_10981930_10981936_+ 0.619163367 0.620182505 0.619672936 0.000720613 SCAR FBtr0305255|FBtr0329950|FBtr0305256|FBtr0329949|FBtr0340223 10981664|10981721|10981664|10981664|10981664 10982293|10982395|10982395|10982395|10982395 2L + 10981849 10982118 3'utr SCAR FlyBase G3988.2 AAAATCAAAAGTTTCATTGAATTGTATATACACCAACGAGTAATTATCGTTAAATTAATCGCTATAGTGAACGAACGCATTTGCATTTTAAGCCTAGACGACAATCCAAGGAAAGCGATTTAAAAGACTTGCTAATTTTGTTCGCTTCTTTGGAGTCAAGGTCTGAGTAGATATGGGCTTCTGTATCATAGTAGTCGGTGTTTGGATATTAAATTATAAATAATCGATATTATCACTGAACTCAATCCTACCCCAACTTGCAATCGATAC 112 10981929 0.983048478 24 105 795 0.939393939 1.394451681 0.21969697 0.151785714 0.28030303 112 4 4 124 2L:10981849-10982118 7 SCAR FBtr0329949|FBtr0305255|FBtr0340223|FBtr0305256|FBtr0329950 10981664|10981664|10981664|10981664|10981721 10982395|10982293|10982395|10982395|10982395 TGCATTT 7mer-m8 dme-miR-277-3p 2L + 10981909 10981986 3'utr SCAR FlyBase G3147.1 GCTATAGTGAACGAACGCATTTGCATTTTAAGCCTAGACGACAATCCAAGGAAAGCGATTTAAAAGACTTGCTAATTT 23 10981929 0.981091321 5 21 148 0.921052632 1.544068044 0.315789474 0.434782609 0.657894737 23 3 0 35 2L:10981909-10981986 7 29 57 FBgn0041781 1138.273333 48.57333333 74.31 0.025477185 0.59703541 0.390257031 1 1 1 0.1 dme-miR-8-3p 6mer3-8 CAGTAT 2L 10982205 10982210 + 2L_10982205_10982210_+ 0.996534328 0.993725736 0.995130032 0.00198598 SCAR FBtr0305255|FBtr0329950|FBtr0305256|FBtr0329949|FBtr0340223 10981664|10981721|10981664|10981664|10981664 10982293|10982395|10982395|10982395|10982395 2L + 10982176 10982221 3'utr SCAR FlyBase G3989.1 ATTAAAATATATCGAACTCCGTAGCATTTCAGTATACTCAACAAGC 12 10982203 0.672943577 5 12 79 1 1.146128036 0.142857143 0.166666667 0.285714286 12 0 0 14 2L:10982176-10982221 6 SCAR FBtr0329949|FBtr0305255|FBtr0340223|FBtr0305256|FBtr0329950 10981664|10981664|10981664|10981664|10981721 10982395|10982293|10982395|10982395|10982395 CAGTAT 6mer3-8 dme-miR-8-3p 2L + 10982183 10982287 3'utr SCAR FlyBase G3149.1 TATATCGAACTCCGTAGCATTTCAGTATACTCAACAAGCTATGAAATTGTATTATCCTTGTGAAAGTTAAATACCTGTATAATTAATAAAATATGTTTCACGAAT 18 10982203 0.982929762 7 17 131 0.903225806 1.447158031 0 0.5 0.709677419 18 3 0 28 2L:10982183-10982287 6 11 58 FBgn0041781 1138.273333 48.57333333 74.31 0.00966376 0.226461707 0.148028529 2 2 2 0.1 dme-miR-8-3p 8mer-A1 CAGTATTA 2L 10989220 10989227 + 2L_10989220_10989227_+ 0.671698122 0.671698085 0.671698104 0 CG12253 FBtr0080149 10989166 10989241 2L + 10989204 10989232 3'utr CG12253 FlyBase G3994.1 TACAATTTGTAACTTTCAGTATTAAAATT 10 10989218 0.713310949 5 10 97 1 1.079181246 0 0.2 0.333333333 10 0 0 12 2L:10989204-10989232 8 CG12253 FBtr0080149 10989166 10989241 CAGTATTA 8mer-A1 dme-miR-8-3p 2L + 10989207 10989233 3'utr CG12253 FlyBase G3150.1 AATTTGTAACTTTCAGTATTAAAATTA 5 10989218 0.750055121 2 4 44 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2L:10989207-10989233 8 7.5 59 FBgn0026148 79.66666667 7.916666667 12.16 0.094142259 0.947368421 0.616776316 2 2 2 0.1 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2L 11009818 11009823 + 2L_11009818_11009823_+ 0.574470792 0.495177209 0.534824 0.056069042 Nup154 FBtr0089881|FBtr0340225 11009758|11009758 11009872|11010921 2L + 11009786 11009838 5'utr Nup154 FlyBase G4022.1 AAATTTTTGAAAGTGCTGGACTAGACGTTAAGTTTGACTGAGATATATATTGT 68 11009819 0.73903455 9 63 478 0.938271605 1.579783597 0.098765432 0.161764706 0.296296296 68 4 1 76 2L:11009786-11009838 6 Nup154 FBtr0089881|FBtr0340225 11009758|11009758 11009872|11010921 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2L + 11009790 11009847 5'utr Nup154 FlyBase G3168.1 TTTTGAAAGTGCTGGACTAGACGTTAAGTTTGACTGAGATATATATTGTATTTGTATT 56 11009819 0.704781175 12 50 418 0.888888889 1.079181246 0.049382716 0.357142857 0.555555556 56 4 5 72 2L:11009790-11009847 6 52 60 FBgn0021761 1536.723333 41.90333333 64.27 0.033838232 1.240951396 0.809086666 -1 -1 -1 0.1 dme-miR-2a-2-5p 8mer-A1 TGATGAGA 2L 11013291 11013298 - 2L_11013291_11013298_- 0.601197728 0.601191042 0.601194385 4.74E-06 Samuel FBtr0080161|FBtr0331197 11013204|11013204 11014199|11014199 2L - 11013271 11013315 3'utr Samuel FlyBase G9962.1 TTTCTACAAAATAGGCATGATGAGAATGAACTTGATTTATTTTAT 66 11013295 0.84673306 4 65 303 1 1.913813852 0.024390244 0.196969697 0.353658537 66 0 0 82 2L:11013271-11013315 8 Samuel FBtr0080161|FBtr0331197 11013204|11013204 11014199|11014199 TGATGAGA 8mer-A1 dme-miR-2a-2-5p 2L - 11013269 11013308 3'utr Samuel FlyBase G7697.1 AAAATAGGCATGATGAGAATGAACTTGATTTATTTTATAC 42 11013295 0.908976223 4 40 185 0.971428571 1.832508913 0.014285714 0.404761905 0.642857143 42 2 0 68 2L:11013269-11013308 8 52.5 61 FBgn0032330 367.82 9.873333333 15.09333333 0.142732858 5.31735314 3.47835689 -3 -3 -3 0.1 dme-miR-7-5p 8mer-A1 GTCTTCCA 2L 11013949 11013956 - 2L_11013949_11013956_- 0.675381663 0.675381664 0.675381663 0 Samuel FBtr0080161|FBtr0331197 11013204|11013204 11014199|11014199 2L - 11013943 11013978 3'utr Samuel FlyBase G9966.1 GAGAAACAACAATAATCGCAAAGTCTTCCATTTGCA 5 11013948 0.963936234 3 5 30 1 0.698970004 0.2 0 0 5 0 0 5 2L:11013943-11013978 8 Samuel FBtr0080161|FBtr0331197 11013204|11013204 11014199|11014199 GTCTTCCA 8mer-A1 dme-miR-7-5p 2L - 11013944 11013976 3'utr Samuel FlyBase G7699.1 GAAACAACAATAATCGCAAAGTCTTCCATTTGC 5 11013950 0.885494638 4 5 27 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 2L:11013944-11013976 8 5 62 FBgn0032330 367.82 9.873333333 15.09333333 0.013593606 0.506414585 0.331272085 -8 -6 -7 0.1 dme-miR-1007-3p 7mer-m8 TGAGCTT 2L 11014119 11014125 - 2L_11014119_11014125_- 0.564197215 0.565573381 0.564885298 0.00097312 Samuel FBtr0080161|FBtr0331197 11013204|11013204 11014199|11014199 2L - 11014100 11014150 3'utr Samuel FlyBase G9968.1 TCACCTGCTAAAATGCTGAACCAAATGAGCTTTCAACACAATTAAGAAAGG 131 11014125 0.946624692 5 130 563 1 2.195899652 0.420382166 0.167938931 0.305732484 131 0 0 157 2L:11014100-11014150 7 Samuel FBtr0080161|FBtr0331197 11013204|11013204 11014199|11014199 TGAGCTT 7mer-m8 dme-miR-1007-3p 2L - 11014110 11014141 3'utr Samuel FlyBase G7700.1 AAAATGCTGAACCAAATGAGCTTTCAACACAA 86 11014125 0.949480115 2 86 351 1 2.08278537 0.595041322 0.302325581 0.504132231 86 0 0 121 2L:11014110-11014141 7 108 63 FBgn0032330 367.82 9.873333333 15.09333333 0.29362188 10.93855503 7.155477032 0 0 0 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2L 1103593 1103598 - 2L_1103593_1103598_- 0.965181132 0.966464137 0.965822635 0.000907218 mtRNApol FBtr0077989|FBtr0332273 1103481|1103252 1103690|1103690 2L - 1103574 1103618 3'utr mtRNApol FlyBase G6728.1 TGAACAATTCGGCTTTCGATACCAAAAAACACGAAGGAAGACAGA 54 1103599 0.977377824 4 54 209 1 1.785329835 0.147540984 0.111111111 0.213114754 54 0 0 61 2L:1103574-1103618 6 mtRNApol FBtr0332273|FBtr0077989 1103252|1103481 1103690|1103690 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 1103569 1103618 3'utr mtRNApol FlyBase G5258.1 TGAACAATTCGGCTTTCGATACCAAAAAACACGAAGGAAGACAGAAGCTA 36 1103599 0.974249827 4 35 140 0.981132075 1.414973348 0.094339623 0.25 0.490566038 36 0 1 52 2L:1103569-1103618 6 44 64 FBgn0261938 910.7533333 24.69666667 38.17333333 0.048311654 1.781616952 1.152637094 1 1 1 0.1 dme-miR-965-3p 6mer2-7 ACGCTT 2L 11095578 11095583 - 2L_11095578_11095583_- 0.999998069 0.996082116 0.998040093 0.00276903 Ge-1 FBtr0080232|FBtr0080231 11095148|11095351 11095687|11095687 2L - 11095563 11095603 3'utr Ge-1 FlyBase G9972.1 ACAAACACATTTATAAATACACGCTTGTAGTTAAGTCCAAA 9 11095586 0.849635666 3 8 73 0.888888889 0.903089987 0 0 0 9 1 0 8 2L:11095563-11095603 6 Ge-1 FBtr0080232|FBtr0080231 11095148|11095351 11095687|11095687 ACGCTT 6mer2-7 dme-miR-965-3p 2L - 11095520 11095601 3'utr Ge-1 FlyBase G7701.1 AAACACATTTATAAATACACGCTTGTAGTTAAGTCCAAAAAGAAGTTAGTATGCTAAAAAGCTCTCAGCTAAGTTCATCCCT 10 11095576 0.987074551 6 9 73 0.842105263 1.204119983 0 0.6 0.789473684 10 3 0 16 2L:11095520-11095601 6 8 65 FBgn0032340 1621.653333 39.62666667 60.70666667 0.004933237 0.201884253 0.131781243 3 -7 -2 0.1 dme-miR-277-3p 6mer3-8 TGCATT 2L 11101954 11101959 - 2L_11101954_11101959_- 0.908511272 0.997210484 0.952860878 0.062719806 Reps FBtr0306139|FBtr0080230 11100961|11100961 11102626|11102626 2L - 11101914 11101997 3'utr Reps FlyBase G9992.1 AGAAACACCAGCGATGGATCTGATAGCTCGTCCGTTTATGCATTGAAGTTGCTAATTTAATTTGTAGGCTAGTTAAATCTCAAG 16 11101983 0.976135704 8 16 101 1 1.230448921 0.058823529 0.0625 0.117647059 16 0 0 17 2L:11101914-11101997 6 Reps FBtr0306139|FBtr0080230 11100961|11100961 11102626|11102626 TGCATT 6mer3-8 dme-miR-277-3p 2L - 11101955 11101997 3'utr Reps FlyBase G7718.1 AGAAACACCAGCGATGGATCTGATAGCTCGTCCGTTTATGCAT 8 11101982 0.948614366 4 8 39 1 1 0.1 0.25 0.4 8 0 0 10 2L:11101955-11101997 4 2.5 66 FBgn0032341 1121.163333 28.39333333 43.52333333 0.002229827 0.088048838 0.057440453 24 23 23.5 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 11102606 11102611 - 2L_11102606_11102611_- 0.99986718 0.999117333 0.999492256 0.000530259 Reps FBtr0306139|FBtr0080230 11100961|11100961 11102626|11102626 2L - 11102552 11102629 stop_codon Reps FlyBase G9994.1 TAAGCAGCGAAAATGATCATGTGAATGAGGGTGAATCGATTTATTTTTGGGCGATATGTGACTTTCGTTTGCCTGTGT 16 11102604 0.978453119 5 15 106 0.9375 1.176091259 0.375 0 0 16 1 0 15 2L:11102552-11102629 6 Reps FBtr0306139|FBtr0080230 11100961|11100961 11102626|11102626 ATGTGA 6mer3-8 dme-miR-1003-3p 2L - 11102555 11102620 3'utr Reps FlyBase G7719.1 AAAATGATCATGTGAATGAGGGTGAATCGATTTATTTTTGGGCGATATGTGACTTTCGTTTGCCTG 13 11102604 0.896656608 5 12 87 0.904761905 0.801632346 0 0.384615385 0.619047619 13 0 2 19 2L:11102555-11102620 6 11.5 67 FBgn0032341 1121.163333 28.39333333 43.52333333 0.010257203 0.405024654 0.264226086 -7 -7 -7 0.1 dme-miR-965-3p 7mer-m8 TACGCTT 2L 11110556 11110562 + 2L_11110556_11110562_+ 0.620204851 0.620204843 0.620204847 7.07E-08 l(2)gd1 FBtr0080197|FBtr0306138 11110434|11110434 11110851|11110851 2L + 11110512 11110605 3'utr l(2)gd1 FlyBase G4062.1 GTTTGTAAATATCCCTCACAGAAAATTCAATTTATCTAAGTATGTACGCTTTTGCCGATTCCTTCGCAGGAAGAAGGCATTTATATATTACGAA 155 11110563 0.989691289 10 145 1420 0.936507937 1.645913275 0.264550265 0.167741935 0.317460317 155 9 3 177 2L:11110512-11110605 7 l(2)gd1 FBtr0306138|FBtr0080197 11110434|11110434 11110851|11110851 TACGCTT 7mer-m8 dme-miR-965-3p 2L + 11110521 11110625 3'utr l(2)gd1 FlyBase G3192.1 TATCCCTCACAGAAAATTCAATTTATCTAAGTATGTACGCTTTTGCCGATTCCTTCGCAGGAAGAAGGCATTTATATATTACGAACACAACACATATAATGTACT 77 11110563 0.987945002 16 74 663 0.975 2.068185862 0.15 0.337662338 0.575 77 3 0 117 2L:11110521-11110625 7 104.5 68 FBgn0261983 621.6366667 24.99666667 38.09666667 0.168104627 4.180557408 2.743022137 -7 -7 -7 0.1 dme-miR-283-5p 7mer-m8 TGATATT 2L 11110662 11110668 + 2L_11110662_11110668_+ 0.620203677 0.620177175 0.620190426 1.87E-05 l(2)gd1 FBtr0080197|FBtr0306138 11110434|11110434 11110851|11110851 2L + 11110653 11110715 3'utr l(2)gd1 FlyBase G4064.1 ATGTATATATGATATTGCCGGCGTTAAGGCGAAGGCGCAAGTCCAGAAGATTGTGCCGGTGAA 10 11110667 0.747844062 7 8 49 0.916666667 1.041392685 0.083333333 0.2 0.333333333 10 1 0 11 2L:11110653-11110715 7 l(2)gd1 FBtr0306138|FBtr0080197 11110434|11110434 11110851|11110851 TGATATT 7mer-m8 dme-miR-283-5p 2L + 11110651 11110719 3'utr l(2)gd1 FlyBase G3193.1 ATATGTATATATGATATTGCCGGCGTTAAGGCGAAGGCGCAAGTCCAGAAGATTGTGCCGGTGAAGTCA 8 11110676 0.886655924 6 8 31 1 1.079181246 0.166666667 0.25 0.5 8 0 0 12 2L:11110651-11110719 7 4.5 69 FBgn0261983 621.6366667 24.99666667 38.09666667 0.007238955 0.180024003 0.11812057 -5 -14 -9.5 0.1 dme-miR-79-3p 7mer-m8 TAGCTTT 2L 11110789 11110795 + 2L_11110789_11110795_+ 0.620202679 0.620203844 0.620203261 7.78E-07 l(2)gd1 FBtr0080197|FBtr0306138 11110434|11110434 11110851|11110851 2L + 11110760 11110806 3'utr l(2)gd1 FlyBase G4065.1 ACTAGCGCCTAGCCGAAACCTGATTATGTTAGCTTTCACATTGCATA 15 11110787 0.741500413 4 14 119 0.875 1.146128036 0 0.066666667 0.125 15 2 0 14 2L:11110760-11110806 7 l(2)gd1 FBtr0306138|FBtr0080197 11110434|11110434 11110851|11110851 TAGCTTT 7mer-m8 dme-miR-79-3p 2L + 11110754 11110801 3'utr l(2)gd1 FlyBase G3194.1 CGGTCCACTAGCGCCTAGCCGAAACCTGATTATGTTAGCTTTCACATT 12 11110787 0.98590921 2 11 96 0.9375 1.176091259 0 0.333333333 0.5 12 1 0 15 2L:11110754-11110801 7 11 70 FBgn0261983 621.6366667 24.99666667 38.09666667 0.017695224 0.440058674 0.288739172 2 2 2 0.1 dme-miR-8-3p 7mer-m8 CAGTATT 2L 11135528 11135534 + 2L_11135528_11135534_+ 0.614240187 0.42967 0.521955094 0.13051084 CG4751 FBtr0080200 11135486 11136003 2L + 11135468 11135547 stop_codon CG4751 FlyBase G4093.1 TGAATCTGTCGCACGACTAGGATGGCTGAATCGGAATCCTTGCCAGCGCAATCGAAGTCGCAGTATTTTCCCAACAGTAT 25 11135535 0.971370586 4 24 144 1 1.477121255 0.066666667 0.16 0.3 25 0 0 30 2L:11135468-11135547 7 CG4751 FBtr0080200 11135486 11136003 CAGTATT 7mer-m8 dme-miR-8-3p 2L + 11135480 11135557 stop_codon CG4751 FlyBase G3210.1 ACGACTAGGATGGCTGAATCGGAATCCTTGCCAGCGCAATCGAAGTCGCAGTATTTTCCCAACAGTATATATTCCCAT 26 11135535 0.857319957 4 26 153 1 1.51851394 0.03030303 0.230769231 0.393939394 26 0 0 33 2L:11135480-11135557 7 22.5 71 FBgn0032348 575.6866667 14.21 21.74333333 0.039083761 1.583391977 1.034799939 -7 -7 -7 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 2L 11144 11149 - 2L_11144_11149_- 1 1 1 0 l(2)gl FBtr0078168|FBtr0306591|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0306590|FBtr0078170|FBtr0330655|FBtr0078171|FBtr0306592|FBtr0078166 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11214|11214|11214|11214|11309|11214|11214|11214 2L - 11126 11211 3'utr l(2)gl FlyBase G6264.1 TGACAGAAGCCGTAACCTACTAATTATTTTATACCTTTACAGAAATACGACGCAAACGAGTACTAGTCCTGATGTAATTTAATCTA 132 11150 0.942780601 10 126 653 0.956521739 1.710399466 0.167701863 0.174242424 0.322981366 132 5 2 154 2L:11126-11211 6 l(2)gl FBtr0306592|FBtr0306590|FBtr0078166|FBtr0330655|FBtr0078171|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0078170|FBtr0078168|FBtr0306591 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11309|11214|11214|11214|11214|11214|11214|11214 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 2L - 11075 11173 3'utr l(2)gl FlyBase G4888.1 ACAGAAATACGACGCAAACGAGTACTAGTCCTGATGTAATTTAATCTATAATTACAAACATGTCTCACTAAAAATCGAACGGGGACAGCAAAATAGGAA 109 11142 0.961532016 8 105 523 0.97752809 1.939519253 0.101123596 0.412844037 0.640449438 109 3 1 174 2L:11075-11173 6 115 72 FBgn0002121 6538.69 148.3266667 227.85 0.017587621 0.775315745 0.504718016 1 -7 -3 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 1114826 1114831 - 2L_1114826_1114831_- 0.975349474 0.999406725 0.987378099 0.017011009 Pino FBtr0077988|FBtr0077988|FBtr0077988|FBtr0332272|FBtr0332272|FBtr0332272|FBtr0077987|FBtr0077987|FBtr0077987 1114652|1114652|1114652|1114652|1114652|1114652|1114652|1114652|1114652 1115733|1115733|1115733|1115733|1115733|1115733|1115733|1115733|1115733 2L - 1114722 1114932 3'utr Pino FlyBase G6741.1 TCTCCAAGGGAAAAGTGAAAGCGCATAGAAATGAGCAATTAAGGATGTGAAAACACGCACAAGGAAACAATTGAAAAGCATTACTCAAAGTTGAAGATTTTCTGTGAAAATCCATATGACATGTAGAAGTTTATACCTAATATATACACCTATATATTATATACCACATAAATCTGCATACAATATACATAAATATATATATATTTTTAAT 160 1114833 0.982222612 24 151 1135 0.952380952 1.77815125 0.142857143 0.15625 0.285714286 160 7 2 180 2L:1114722-1114932 6 Pino FBtr0077988|FBtr0077988|FBtr0077988|FBtr0332272|FBtr0332272|FBtr0332272|FBtr0077987|FBtr0077987|FBtr0077987 1114652|1114652|1114652|1114652|1114652|1114652|1114652|1114652|1114652 1115733|1115733|1115733|1115733|1115733|1115733|1115733|1115733|1115733 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 1114781 1114967 3'utr Pino FlyBase G5268.1 AGTGCTCAACAAAGTAACTACAGGATTGAACAATTTCTCCAAGGGAAAAGTGAAAGCGCATAGAAATGAGCAATTAAGGATGTGAAAACACGCACAAGGAAACAATTGAAAAGCATTACTCAAAGTTGAAGATTTTCTGTGAAAATCCATATGACATGTAGAAGTTTATACCTAATATATACACCTA 87 1114834 0.984882169 26 77 623 0.888 1.142232992 0.112 0.356321839 0.552 87 7 7 111 2L:1114781-1114967 6 53 73 FBgn0016926 853.46 50.28 77.25 0.062100157 1.054097056 0.686084142 2 3 2.5 0.1 dme-miR-283-5p 8mer-A1 TGATATTA 2L 1115267 1115274 - 2L_1115267_1115274_- 0.403403401 0.374050555 0.388726978 0.020755564 Pino FBtr0077988|FBtr0332272|FBtr0077987 1114652|1114652|1114652 1115733|1115733|1115733 2L - 1115161 1115466 3'utr Pino FlyBase G6744.1 GTTTTATGATTTCACCGGTATCGTTTTCGTTCCGATTCGTTGTGTGACAGTGCAAATATTTAGCAACTAAGTTAGTTCCTTTGTTTACCTTCCAATGGCACCATTTGGTTTGCGCACATTACCTGTTCTATCCAGGAGAAGACTTCTTTCTGCCTAGACTTAAGCCGAGTTTAGGCAATGCAGTGATAACGGTGATATTAGCCAGAAAGAATCGTGAGCAAATAGTGAATTTACATGATGTAGCAAATGTCTAACGATAGCTATAGATCGACATGAGATGATCATTTTTGTATAACCCCACACGCA 443 1115288 0.971095918 61 427 2948 0.965973535 2.106360909 0.228733459 0.162528217 0.298676749 443 15 3 511 2L:1115161-1115466 8 Pino FBtr0077988|FBtr0332272|FBtr0077987 1114652|1114652|1114652 1115733|1115733|1115733 TGATATTA 8mer-A1 dme-miR-283-5p 2L - 1115224 1115474 3'utr Pino FlyBase G5271.2 AATCTTTTGTTTTATGATTTCACCGGTATCGTTTTCGTTCCGATTCGTTGTGTGACAGTGCAAATATTTAGCAACTAAGTTAGTTCCTTTGTTTACCTTCCAATGGCACCATTTGGTTTGCGCACATTACCTGTTCTATCCAGGAGAAGACTTCTTTCTGCCTAGACTTAAGCCGAGTTTAGGCAATGCAGTGATAACGGTGATATTAGCCAGAAAGAATCGTGAGCAAATAGTGAATTTACATGATGTAG 385 1115288 0.901952578 52 361 2408 0.935587762 2.162116141 0.241545894 0.420779221 0.640901771 385 37 3 581 2L:1115224-1115474 8 144.5 74 FBgn0016926 853.46 50.28 77.25 0.169310805 2.873906126 1.870550162 14 14 14 0.1 dme-miR-965-3p 6mer2-7 ACGCTT 2L 11180036 11180041 + 2L_11180036_11180041_+ 0.883027974 0.879625875 0.881326925 0.002405648 CG4788 FBtr0080202 11179989 11180430 2L + 11180009 11180088 3'utr CG4788 FlyBase G4102.2 CGGAGGAATACTTTAGTTAAGCCAAAAACGCTTGGGTCAACTACTACAGCGACCTACCCTAAATATAGTTAATCTAGGCC 86 11180041 0.773992348 8 80 287 0.957264957 1.572096768 0.017094017 0.244186047 0.444444444 86 3 2 112 2L:11180009-11180088 6 CG4788 FBtr0080202 11179989 11180430 ACGCTT 6mer2-7 dme-miR-965-3p 2L + 11179939 11180082 stop_codon CG4788 FlyBase G3216.1 TGTCGAGTTGCGACGTACGGTGGCGCGCTTGGAGGAGAATAGTCGCCGCTAGATGACCGACTTCCCTTTGCGGAGGAATACTTTAGTTAAGCCAAAAACGCTTGGGTCAACTACTACAGCGACCTACCCTAAATATAGTTAATC 66 11180041 0.941537613 10 64 260 0.965517241 1.924279286 0.126436782 0.212121212 0.402298851 66 3 0 84 2L:11179939-11180082 6 61 75 FBgn0032354 97.66666667 9.44 14.38333333 0.624573379 6.461864407 4.241019699 -5 -5 -5 0.1 dme-miR-14-3p 7mer-m8 AAGACTG 2L 11180259 11180265 + 2L_11180259_11180265_+ 0.671795601 0.671795691 0.671795646 7.07E-08 CG4788 FBtr0080202 11179989 11180430 2L + 11180237 11180278 3'utr CG4788 FlyBase G4104.1 ACATAGATGTTTTCAAACAATTAAGACTGGAAAAATACAAAA 11 11180257 0.95103807 2 10 47 1 1.146128036 0.071428571 0.090909091 0.285714286 11 0 0 14 2L:11180237-11180278 7 CG4788 FBtr0080202 11179989 11180430 AAGACTG 7mer-m8 dme-miR-14-3p 2L + 11180239 11180272 3'utr CG4788 FlyBase G3217.1 ATAGATGTTTTCAAACAATTAAGACTGGAAAAAT 9 11180257 0.808056068 3 7 55 0.8 0.903089987 0 0.111111111 0.2 9 2 0 8 2L:11180239-11180272 7 9.5 76 FBgn0032354 97.66666667 9.44 14.38333333 0.097269625 1.006355932 0.660486674 2 2 2 0.1 dme-miR-2b-2-5p 7mer-A1 TGAAGAA 2L 11227 11233 - 2L_11227_11233_- 0.82329219 0.823293293 0.823292741 7.78E-07 l(2)gl FBtr0330655 9837 11309 2L - 11216 11295 stop_codon l(2)gl FlyBase G6265.1 ACAAACATTTCTCATGAAAAAACGAACGGAGACAACAAAATAGGAACGCCAAAAACAGCGCCTGAAGAAAGCCAATTTTA 12 11233 0.934810111 4 11 11 0.928571429 1.113943352 0.142857143 0.166666667 0.285714286 12 1 0 13 2L:11216-11295 7 l(2)gl FBtr0330655 9837 11309 TGAAGAA 7mer-A1 dme-miR-2b-2-5p 2L - 11217 11254 3'utr l(2)gl FlyBase G4889.1 AGGAACGCCAAAAACAGCGCCTGAAGAAAGCCAATTTT 9 11233 0.514032001 2 8 8 1 1.176091259 0 0.444444444 0.666666667 9 0 0 15 2L:11217-11254 7 8.5 77 FBgn0002121 6538.69 148.3266667 227.85 0.001299955 0.057305946 0.037305245 0 0 0 0.1 dme-miR-14-3p 8mer-A1 AAGACTGA 2L 11277478 11277485 + 2L_11277478_11277485_+ 0.643565468 0.643565456 0.643565462 0 cana FBtr0344017|FBtr0091678|FBtr0344016 11277334|11277334|11277334 11277846|11277846|11277846 2L + 11277439 11277526 intron-3'utr cana FlyBase G4113.1 AGGTGGCAATTGCCACTGCGAGCAGCGGAGCTGCAAACAAAGACTGAGTTCGGACTGGAGGCAAAACGTTGAGTTCAACGATGATAAA 54 11277493 0.945825481 7 48 189 0.916666667 1.439332694 0.316666667 0.092592593 0.183333333 54 4 1 55 2L:11277439-11277526 8 cana FBtr0344017|FBtr0091678|FBtr0344016 11277334|11277334|11277334 11277846|11277846|11277846 AAGACTGA 8mer-A1 dme-miR-14-3p 2L + 11277448 11277521 3'utr cana FlyBase G3221.1 TTGCCACTGCGAGCAGCGGAGCTGCAAACAAAGACTGAGTTCGGACTGGAGGCAAAACGTTGAGTTCAACGATG 37 11277488 0.942388917 6 32 128 0.915254237 1.130333768 0.576271186 0.378378378 0.610169492 37 2 3 54 2L:11277448-11277521 8 35.5 78 FBgn0040233 712.72 14.75333333 22.66 0.049809182 2.406235879 1.566637246 -15 -10 -12.5 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC 2L 112797 112803 + 2L_112797_112803_+ 0.661614679 0.661615645 0.661615162 6.36E-07 Sam-S FBtr0330656|FBtr0089428 112780|112740 114432|114210 2L + 112764 112818 stop_codon Sam-S FlyBase G455.2 AAACGAAAAGATTGCTGAGCTGCGTCGCTCAGATGTGTTCTGGTGGGCTCGCCCC 14 112804 0.976396693 4 13 82 0.894736842 1.230448921 0.315789474 0.285714286 0.473684211 14 2 0 17 2L:112764-112818 7 Sam-S FBtr0089428|FBtr0330656 112740|112780 114210|114432 TGTGTTC 7mer-m8 dme-miR-317-3p 2L + 112723 112822 stop_codon Sam-S FlyBase G382.1 GAGGAATGTATGCCCCTAACCGTCGTTTTGGCTCACAAACTAAACGAAAAGATTGCTGAGCTGCGTCGCTCAGATGTGTTCTGGTGGGCTCGCCCCGATT 21 112804 0.980591471 8 20 141 0.95 1.579783597 0.25 0.571428571 0.775 21 2 0 38 2L:112723-112822 7 12.5 79 FBgn0005278 1886.66 102.5866667 157.21 0.006625465 0.121848193 0.079511481 -7 -7 -7 0.1 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 11281713 11281719 + 2L_11281713_11281719_+ 0.644304303 0.786218403 0.715261353 0.100348422 Ppt2 FBtr0080212 11281669 11281920 2L + 11281593 11281750 stop_codon Ppt2 FlyBase G4121.1 AAACCCCATGTTCATCATCTTGCCTGGCACACGCGAAGGGATGTCATCCACGAAGTGATATTTCCATATCTGGACTGAATAAGAAACCAAAACTACTGAACTATACTGAGCGATCAAACGGCTGTGATCGGAAAGGCGGACAAAGGCTCACTCTCATC 86 11281698 0.969928004 18 70 398 0.83 1.317018101 0.25 0.127906977 0.25 86 14 3 83 2L:11281593-11281750 7 Ppt2 FBtr0080212 11281669 11281920 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L + 11281589 11281749 stop_codon Ppt2 FlyBase G3230.1 GGTCAAACCCCATGTTCATCATCTTGCCTGGCACACGCGAAGGGATGTCATCCACGAAGTGATATTTCCATATCTGGACTGAATAAGAAACCAAAACTACTGAACTATACTGAGCGATCAAACGGCTGTGATCGGAAAGGCGGACAAAGGCTCACTCTCAT 57 11281698 0.975088893 16 45 279 0.822222222 1.392110465 0.255555556 0.368421053 0.6 57 14 2 74 2L:11281589-11281749 7 36.5 80 FBgn0032358 64.33333333 6.69 10.29333333 0.567357513 5.455904335 3.545984456 15 15 15 0.1 dme-miR-33-5p 6mer3-8 CAATGC 2L 1132056 1132061 + 2L_1132056_1132061_+ 0.995416042 0.995368673 0.995392357 3.34E-05 CG4552 FBtr0077956 1131952 1132411 2L + 1132041 1132130 3'utr CG4552 FlyBase G972.1 CAGAGACACAAAGTGCAATGCGCCGCTGCGAGCGGTGTAATAGTTTGTAATTGGCATTGTTTTCCTTGTATTAGCTGAAATAGTATAGTT 34 1132059 0.973325131 10 32 237 0.95 1.278753601 0.3 0.147058824 0.275 34 1 1 38 2L:1132041-1132130 6 CG4552 FBtr0077956 1131952 1132411 CAATGC 6mer3-8 dme-miR-33-5p 2L + 1132037 1132079 3'utr CG4552 FlyBase G780.1 AAATCAGAGACACAAAGTGCAATGCGCCGCTGCGAGCGGTGTA 12 1132059 0.974488497 2 9 33 0.933333333 1.146128036 0.4 0.25 0.4 12 1 0 14 2L:1132037-1132079 6 13 81 FBgn0031304 726.5833333 32.48666667 49.62 0.01789196 0.40016417 0.261991133 -3 -3 -3 0.1 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA 2L 1132193 1132200 + 2L_1132193_1132200_+ 0.626992282 0.627007341 0.626999811 1.06E-05 CG4552 FBtr0077956 1131952 1132411 2L + 1132133 1132223 3'utr CG4552 FlyBase G973.1 TATTGTAAACGAAGCGCTGGCTGCAATTGTAACATAGTGCACTCGGTGCAGAGACCGGATTTGAAGAAAATAGTCGAACGTAGTCCCAGAT 32 1132192 0.962180837 7 30 156 0.951219512 1.113943352 0.243902439 0.25 0.414634146 32 0 2 39 2L:1132133-1132223 8 CG4552 FBtr0077956 1131952 1132411 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p 2L + 1132127 1132247 3'utr CG4552 FlyBase G781.1 AGTTCTTATTGTAAACGAAGCGCTGGCTGCAATTGTAACATAGTGCACTCGGTGCAGAGACCGGATTTGAAGAAAATAGTCGAACGTAGTCCCAGATCACATGGCCATCCCGAGCATGCCA 18 1132192 0.955255859 8 16 88 0.925925926 1.397940009 0.259259259 0.444444444 0.62962963 18 2 0 25 2L:1132127-1132247 8 15 82 FBgn0031304 726.5833333 32.48666667 49.62 0.020644569 0.461727888 0.302297461 1 1 1 0.1 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2L 113341 113346 + 2L_113341_113346_+ 0.9998315 0.999813787 0.999822644 1.25E-05 Sam-S FBtr0330656|FBtr0089428 112780|112740 114432|114210 2L + 113296 113368 5'utr Sam-S FlyBase G458.2 TCTCACAAGTCACAAAAAGAACTTCTGGATATCATCCGTCGAAACTTTGACCTCAGGCCCGGCAAGATTGTCA 250 113342 0.685262887 9 243 1015 0.982698962 2.152288344 0.342560554 0.14 0.256055363 250 4 1 284 2L:113296-113368 6 Sam-S FBtr0089428|FBtr0330656 112740|112780 114210|114432 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2L + 113290 113363 5'utr Sam-S FlyBase G386.1 GGAACTTCTCACAAGTCACAAAAAGAACTTCTGGATATCATCCGTCGAAACTTTGACCTCAGGCCCGGCAAGAT 98 113342 0.935522472 5 96 369 0.992592593 2.127104798 0.318518519 0.295918367 0.488888889 98 1 0 134 2L:113290-113363 6 167 83 FBgn0005278 1886.66 102.5866667 157.21 0.088516214 1.627891864 1.062273392 -1 -1 -1 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG 2L 113734 113739 + 2L_113734_113739_+ 0.999329012 0.998767664 0.999048338 0.000396899 Sam-S FBtr0330656|FBtr0089429|FBtr0089431|FBtr0089430|FBtr0089436|FBtr0089434|FBtr0089435|FBtr0089437|FBtr0089432|FBtr0089428|FBtr0089433 112780|113541|113541|113541|113541|113541|113541|113541|113541|112740|113541 114432|114432|114432|114432|114210|114432|114432|114432|114210|114210|114432 2L + 113694 113904 3'utr Sam-S FlyBase G461.2 TAGGCTTGCCAACTCTTATGGGCTTTCTTCTCTAACTTATGCTGTGCTCTTCGCTATATAATTTAAACCATTCTGATGTGTGTAGTCTTCTCACACGGAACTAGTTTTAGTCGTCTTAATACCCGCATATATACCTAATAGAGAGCTCCAAAAGAATTGATGAGCTTTAGTTATGCATATACATAGTATAGTGTCGGTCAGTTCAGTAAAA 148 113733 0.951739125 30 141 1345 0.947674419 1.610127613 0.13372093 0.162162162 0.279069767 148 6 3 163 2L:113694-113904 6 Sam-S FBtr0089433|FBtr0089432|FBtr0089428|FBtr0089437|FBtr0089435|FBtr0089434|FBtr0089436|FBtr0089430|FBtr0089431|FBtr0089429|FBtr0330656 113541|113541|112740|113541|113541|113541|113541|113541|113541|113541|112780 114432|114210|114210|114432|114432|114432|114210|114432|114432|114432|114432 GCTGTG 6mer2-7 dme-miR-1008-3p 2L + 113675 113877 3'utr Sam-S FlyBase G387.2 GTCAGAGGAGAAGGCGGCATAGGCTTGCCAACTCTTATGGGCTTTCTTCTCTAACTTATGCTGTGCTCTTCGCTATATAATTTAAACCATTCTGATGTGTGTAGTCTTCTCACACGGAACTAGTTTTAGTCGTCTTAATACCCGCATATATACCTAATAGAGAGCTCCAAAAGAATTGATGAGCTTTAGTTATGCATATACAT 79 113733 0.939056871 21 71 694 0.896551724 1.716003344 0.137931034 0.316455696 0.534482759 79 11 1 104 2L:113675-113877 6 45 84 FBgn0005278 1886.66 102.5866667 157.21 0.023851674 0.438653496 0.286241333 1 1 1 0.1 dme-miR-92b-3p 7mer-m1 TGCAATT 2L 11508892 11508898 - 2L_11508892_11508898_- 0.765586643 0.765586181 0.765586412 2.83E-07 CG6509 FBtr0336630|FBtr0080247|FBtr0080246|FBtr0336631 11508397|11508397|11508772|11508397 11511170|11509299|11509299|11509299 2L - 11508876 11508967 3'utr CG6509 FlyBase G10060.1 AATTTATATATACCGTTTGGAACTAGATTTCCTTCTCTGGCGACATTCTAAGCCAAAAGTCTGTTTGTATGCAATTTATTATTATGTAATTG 22 11508902 0.985644958 12 20 174 0.931034483 1.431363764 0.068965517 0.272727273 0.448275862 22 2 0 27 2L:11508876-11508967 7 CG6509 FBtr0080246|FBtr0336631|FBtr0336630|FBtr0080247 11508772|11508397|11508397|11508397 11509299|11509299|11511170|11509299 TGCAATT 7mer-m1 dme-miR-92b-3p 2L - 11508897 11508944 3'utr CG6509 FlyBase G7755.1 TAGATTTCCTTCTCTGGCGACATTCTAAGCCAAAAGTCTGTTTGTATG 11 11508905 0.78637229 5 11 75 1 1.204119983 0 0.454545455 0.625 11 0 0 16 2L:11508897-11508944 1 3.5 85 FBgn0032363 893.76 15.01 22.98666667 0.00391604 0.233177881 0.152262181 4 7 5.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2L 11509100 11509105 - 2L_11509100_11509105_- 0.990930004 0.900193787 0.945561895 0.064160182 CG6509 FBtr0336630|FBtr0080247|FBtr0080246|FBtr0336631 11508397|11508397|11508772|11508397 11511170|11509299|11509299|11509299 2L - 11509002 11509110 3'utr CG6509 FlyBase G10061.1 ATTTCTACCTGTTTCTTGTCTCTGTCACCTAATTAATGTCTATAGACTTACTCTTTATTTGCGGTTAGTCCGACCGCTCTGACGGCAAAATATGGTCAGCTTTAATCAC 15 11509098 0.965186762 11 15 128 1 1.278753601 0 0.266666667 0.421052632 15 0 0 19 2L:11509002-11509110 6 CG6509 FBtr0080246|FBtr0336631|FBtr0336630|FBtr0080247 11508772|11508397|11508397|11508397 11509299|11509299|11511170|11509299 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2L - 11509018 11509110 3'utr CG6509 FlyBase G7756.1 ATTTCTACCTGTTTCTTGTCTCTGTCACCTAATTAATGTCTATAGACTTACTCTTTATTTGCGGTTAGTCCGACCGCTCTGACGGCAAAATAT 14 11509096 0.988549035 5 11 120 0.8 0.903089987 0 0.357142857 0.55 14 3 1 16 2L:11509018-11509110 6 4 86 FBgn0032363 893.76 15.01 22.98666667 0.004475474 0.266489007 0.174013921 -7 -9 -8 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 11510219 11510226 - 2L_11510219_11510226_- 0.650171355 0.650171018 0.650171187 2.83E-07 CG6509 FBtr0336630|FBtr0336630|FBtr0336630 11508397|11508397|11508397 11511170|11511170|11511170 2L - 11510184 11510250 5'utr CG6509 FlyBase G10068.1 ACTGCGTTCGGGTGAGGTGGTCGACTGTGATACGGGAACGGCCAGACGCGGCAGCACTTCGGCCAGA 6 11510233 0.979863718 4 4 27 0.714285714 0.698970004 0.428571429 0.166666667 0.285714286 6 2 0 5 2L:11510184-11510250 8 CG6509 FBtr0336630|FBtr0336630|FBtr0336630 11508397|11508397|11508397 11511170|11511170|11511170 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 11510210 11510245 5'utr CG6509 FlyBase G7759.1 GTTCGGGTGAGGTGGTCGACTGTGATACGGGAACGG 5 11510230 0.86229746 3 5 27 1 0.954242509 0.666666667 0.6 0.777777778 5 0 0 9 2L:11510210-11510245 8 4 87 FBgn0032363 893.76 15.01 22.98666667 0.004475474 0.266489007 0.174013921 7 4 5.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 11523071 11523077 - 2L_11523071_11523077_- 0.801969591 0.801967119 0.801968355 1.77E-06 CG31705 FBtr0345719|FBtr0345719|FBtr0345719 11523019|11523019|11523019 11523549|11523549|11523549 2L - 11523054 11523094 3'utr CG31705 FlyBase G10102.1 CAGACCACTATAACATTTGTGATACAATAACAATTGGAAAA 11 11523079 0.970156949 3 11 79 1 1.041392685 0 0 0 11 0 0 11 2L:11523054-11523094 7 CG31705 FBtr0345719|FBtr0345719|FBtr0345719 11523019|11523019|11523019 11523549|11523549|11523549 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 11523064 11523093 3'utr CG31705 FlyBase G7779.1 AGACCACTATAACATTTGTGATACAATAAC 9 11523079 0.715347665 2 9 60 1 1.230448921 0 0.444444444 0.705882353 9 0 0 17 2L:11523064-11523093 7 10 88 FBgn0028490 1886.113333 87.62 132.81 0.005301908 0.114129194 0.075295535 2 2 2 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 2L 11523516 11523521 - 2L_11523516_11523521_- 0.999985962 0.999989211 0.999987587 2.26E-06 CG31705 FBtr0345719|FBtr0321293|FBtr0080242 11523019|11523302|11523302 11523549|11523549|11523549 2L - 11523497 11523569 stop_codon CG31705 FlyBase G10105.1 TGGCCTACTGTCTCCACTAACGGCCCATTGCCTCCATACAATCCTTAATTGACTCAAGGACACAGTCTCGTTG 29 11523521 0.820683836 7 26 157 0.894736842 0.929418926 0.052631579 0.24137931 0.421052632 29 1 3 34 2L:11523497-11523569 6 CG31705 FBtr0080242|FBtr0321293|FBtr0345719 11523302|11523302|11523019 11523549|11523549|11523549 TTGACT 6mer3-8 dme-miR-1012-3p 2L - 11523496 11523551 stop_codon CG31705 FlyBase G7782.1 AACGGCCCATTGCCTCCATACAATCCTTAATTGACTCAAGGACACAGTCTCGTTGG 20 11523521 0.870384457 7 19 103 0.925925926 1.397940009 0 0.25 0.444444444 20 2 0 25 2L:11523496-11523551 6 21 89 FBgn0028490 1886.113333 87.62 132.81 0.011134008 0.239671308 0.158120623 0 0 0 0.1 dme-miR-14-3p 7mer-m8 AAGACTG 2L 1166384 1166390 + 2L_1166384_1166390_+ 0.671793482 0.670866301 0.671329891 0.000655629 IntS14 FBtr0077962 1166360 1166425 2L + 1166372 1166405 3'utr IntS14 FlyBase G990.1 TGTCCTTACTTTAAGACTGTGTTTACTTTGTAAT 6 1166381 0.895502368 5 6 63 1 0.903089987 0 0.166666667 0.375 6 0 0 8 2L:1166372-1166405 7 IntS14 FBtr0077962 1166360 1166425 AAGACTG 7mer-m8 dme-miR-14-3p 2L + 1166367 1166408 3'utr IntS14 FlyBase G793.1 TTTTATGTCCTTACTTTAAGACTGTGTTTACTTTGTAATACA 7 1166391 0.987049466 4 7 78 1 1.176091259 0 0.571428571 0.8 7 0 0 15 2L:1166367-1166408 7 6.5 90 FBgn0031314 268.3333333 16.95333333 25.93333333 0.024223602 0.383405427 0.250642674 3 -7 -2 0.1 dme-miR-283-5p 7mer-m8 TGATATT 2L 117202 117208 - 2L_117202_117208_- 0.620187176 0.620104559 0.620145868 5.84E-05 CG4822 FBtr0100309|FBtr0100310|FBtr0330646 117077|117172|117077 119269|119426|119201 2L - 117100 117791 lincRNA_intron-lincRNA_exon CG4822 FlyBase G6309.1 AATATATCCTGATTAGTTCACTTATACTTTAGAATGCAATGTTCATGGGGCCAGTTCTCGCCGTGCCGCTGATCCTGCTTTCCATTTACGGCATTGGGTATGGCGGAGGAACATACATATCCCCTCTTATGAGGTTTCTCATGCATCTTAGCTACCTTCGCCATAGTATGGAAGGCCTAGTCGCATCCTTGTACGACTACGGACGCGCCGACACAATTTGCGAAGACACGGAAATCTTTTGCTCATTTAAAAAGTCGAAAGTTTTGTTAGCCTTTTTAGGATTCGAAAACATGCACTATTTGTGGTCTCTATCTTGCTTGATGAGTTTTTATTTGCTGTTCACCGTAGCAGCATACTTTATGATTAGACTGCGACTGAAACACTCCGAGGTCAGCCCCATTTTTGCATATGTCATACAGCTGTTAACGAAATATTTTAACTTTACTTCGTACAATTACTAACATTAACAACATGGGCGGTTTGACCTCGGTGCTAGAAAAATTATTTTAAGCGGTATTTCAGGGGACAGTCTTAACCTCCCATATTATTTATGGGCTTCAATAATATTAATAAACTATCAAAGTGATATTGGATTCTGAATAAAAGTTTATGATCAAGAATACAAATATAATCAAGGGAACAATAAATTACTATAATTCGATCATATTGTTAACAAGGCAGAAGAAACACTA 1262 117203 0.938729087 153 1181 9042 0.936821953 2.052782703 0.128908743 0.198098257 0.354179962 1262 87 12 1468 2L:117100-117791 7 CG4822 FBtr0100310|FBtr0330646|FBtr0100309 117172|117077|117077 119426|119201|119269 TGATATT 7mer-m8 dme-miR-283-5p 2L - 117098 117754 stop_codon CG4822 FlyBase G4924.1 AATGTTCATGGGGCCAGTTCTCGCCGTGCCGCTGATCCTGCTTTCCATTTACGGCATTGGGTATGGCGGAGGAACATACATATCCCCTCTTATGAGGTTTCTCATGCATCTTAGCTACCTTCGCCATAGTATGGAAGGCCTAGTCGCATCCTTGTACGACTACGGACGCGCCGACACAATTTGCGAAGACACGGAAATCTTTTGCTCATTTAAAAAGTCGAAAGTTTTGTTAGCCTTTTTAGGATTCGAAAACATGCACTATTTGTGGTCTCTATCTTGCTTGATGAGTTTTTATTTGCTGTTCACCGTAGCAGCATACTTTATGATTAGACTGCGACTGAAACACTCCGAGGTCAGCCCCATTTTTGCATATGTCATACAGCTGTTAACGAAATATTTTAACTTTACTTCGTACAATTACTAACATTAACAACATGGGCGGTTTGACCTCGGTGCTAGAAAAATTATTTTAAGCGGTATTTCAGGGGACAGTCTTAACCTCCCATATTATTTATGGGCTTCAATAATATTAATAAACTATCAAAGTGATATTGGATTCTGAATAAAAGTTTATGATCAAGAATACAAATATAATCAAGGGAACAATAAATTACTATAATTCGATCATATTGTTAACAAGGCAGAAGAAACACTACG 863 117203 0.982810554 128 792 5976 0.926584235 1.736396502 0.14992272 0.351100811 0.567233385 863 74 21 1199 2L:117098-117754 7 235.5 91 FBgn0031220 2984.836667 134.1266667 204.7566667 0.07889879 1.755802972 1.150145701 -5 -5 -5 0.1 dme-miR-14-3p 6mer2-7 AGACTG 2L 117421 117426 - 2L_117421_117426_- 0.553561828 0.999628352 0.77659509 0.315416718 CG4822 FBtr0100309|FBtr0100310|FBtr0330646 117077|117172|117077 119269|119426|119201 2L - 117100 117791 lincRNA_intron-lincRNA_exon CG4822 FlyBase G6309.1 AATATATCCTGATTAGTTCACTTATACTTTAGAATGCAATGTTCATGGGGCCAGTTCTCGCCGTGCCGCTGATCCTGCTTTCCATTTACGGCATTGGGTATGGCGGAGGAACATACATATCCCCTCTTATGAGGTTTCTCATGCATCTTAGCTACCTTCGCCATAGTATGGAAGGCCTAGTCGCATCCTTGTACGACTACGGACGCGCCGACACAATTTGCGAAGACACGGAAATCTTTTGCTCATTTAAAAAGTCGAAAGTTTTGTTAGCCTTTTTAGGATTCGAAAACATGCACTATTTGTGGTCTCTATCTTGCTTGATGAGTTTTTATTTGCTGTTCACCGTAGCAGCATACTTTATGATTAGACTGCGACTGAAACACTCCGAGGTCAGCCCCATTTTTGCATATGTCATACAGCTGTTAACGAAATATTTTAACTTTACTTCGTACAATTACTAACATTAACAACATGGGCGGTTTGACCTCGGTGCTAGAAAAATTATTTTAAGCGGTATTTCAGGGGACAGTCTTAACCTCCCATATTATTTATGGGCTTCAATAATATTAATAAACTATCAAAGTGATATTGGATTCTGAATAAAAGTTTATGATCAAGAATACAAATATAATCAAGGGAACAATAAATTACTATAATTCGATCATATTGTTAACAAGGCAGAAGAAACACTA 1262 117425 0.938729087 153 1181 9042 0.936821953 2.052782703 0.128908743 0.198098257 0.354179962 1262 87 12 1468 2L:117100-117791 6 CG4822 FBtr0100310|FBtr0330646|FBtr0100309 117172|117077|117077 119426|119201|119269 AGACTG 6mer2-7 dme-miR-14-3p 2L - 117098 117754 stop_codon CG4822 FlyBase G4924.1 AATGTTCATGGGGCCAGTTCTCGCCGTGCCGCTGATCCTGCTTTCCATTTACGGCATTGGGTATGGCGGAGGAACATACATATCCCCTCTTATGAGGTTTCTCATGCATCTTAGCTACCTTCGCCATAGTATGGAAGGCCTAGTCGCATCCTTGTACGACTACGGACGCGCCGACACAATTTGCGAAGACACGGAAATCTTTTGCTCATTTAAAAAGTCGAAAGTTTTGTTAGCCTTTTTAGGATTCGAAAACATGCACTATTTGTGGTCTCTATCTTGCTTGATGAGTTTTTATTTGCTGTTCACCGTAGCAGCATACTTTATGATTAGACTGCGACTGAAACACTCCGAGGTCAGCCCCATTTTTGCATATGTCATACAGCTGTTAACGAAATATTTTAACTTTACTTCGTACAATTACTAACATTAACAACATGGGCGGTTTGACCTCGGTGCTAGAAAAATTATTTTAAGCGGTATTTCAGGGGACAGTCTTAACCTCCCATATTATTTATGGGCTTCAATAATATTAATAAACTATCAAAGTGATATTGGATTCTGAATAAAAGTTTATGATCAAGAATACAAATATAATCAAGGGAACAATAAATTACTATAATTCGATCATATTGTTAACAAGGCAGAAGAAACACTACG 863 117423 0.982810554 128 792 5976 0.926584235 1.736396502 0.14992272 0.351100811 0.567233385 863 74 21 1199 2L:117098-117754 6 166.5 92 FBgn0031220 2984.836667 134.1266667 204.7566667 0.055781947 1.241363885 0.813160337 -1 -3 -2 0.1 dme-bantam-3p 7mer-m8 TGATCTC 2L 117839 117845 - 2L_117839_117845_- 0.661608035 0.661611212 0.661609623 2.26E-06 CG4822 FBtr0100309|FBtr0100310|FBtr0330646 117077|117172|117077 119269|119426|119201 2L - 117809 118068 3'utr-intron CG4822 FlyBase G6310.1 GAAATCAATCTGTTAAAAAGGGAGTACAACAACCAGTGGTACCGTCTGAGCTCCTACTACGCAGCAATGGTTACCTCAAAGCTACCATCTATGTTTATTTTGGCCGTTATTTATCTATCCATTGTGTACTTAATGTCCAGCCAACCACTTGAATGGTTCCGCTTTGCCATGCTATTTACAATAGCTTTCGTAACGGCCCTAACTTCCGACAGTTTTGGCTTGTTGATCTCCAGTAGACTGAGCTTAGTGGTAAGCGATTT 4416 117846 0.849819808 65 4268 40796 0.967397521 2.290377115 0.186081983 0.154211957 0.287893232 4416 146 25 5074 2L:117809-118068 7 CG4822 FBtr0100310|FBtr0330646|FBtr0100309 117172|117077|117077 119426|119201|119269 TGATCTC 7mer-m8 dme-bantam-3p 2L - 117809 118076 3'utr-intron CG4822 FlyBase G4926.1 TTCCCACGGAAATCAATCTGTTAAAAAGGGAGTACAACAACCAGTGGTACCGTCTGAGCTCCTACTACGCAGCAATGGTTACCTCAAAGCTACCATCTATGTTTATTTTGGCCGTTATTTATCTATCCATTGTGTACTTAATGTCCAGCCAACCACTTGAATGGTTCCGCTTTGCCATGCTATTTACAATAGCTTTCGTAACGGCCCTAACTTCCGACAGTTTTGGCTTGTTGATCTCCAGTAGACTGAGCTTAGTGGTAAGCGATTT 2638 117846 0.83996091 58 2539 23816 0.962350547 2.072686363 0.188756042 0.354435178 0.566776902 2638 117 31 3783 2L:117809-118076 7 3173.5 93 FBgn0031220 2984.836667 134.1266667 204.7566667 1.063207255 23.6604702 15.49888486 1 1 1 0.1 dme-miR-980-3p 7mer-A1 GCAGCTA 2L 11796912 11796918 - 2L_11796912_11796918_- 0.823294543 0.823226312 0.823260427 4.82E-05 crol FBtr0335474|FBtr0080262|FBtr0335475|FBtr0080263|FBtr0305262|FBtr0080261|FBtr0335473|FBtr0335476|FBtr0080260 11794325|11795170|11794325|11795170|11795170|11795494|11794325|11795167|11794325 11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124 2L - 11796907 11797013 3'utr crol FlyBase G10122.2 AGGCATGCGTGCCACCAGTGAGCCAGTGCTAGTGAGCCGAGCTGACGCGACTTCTCTAGATAGGACACACATCATAACAAGCGCACCCCATATAAGCAGCTAGTTGT 119 11796921 0.855509757 14 115 513 0.964285714 1.528273777 0.3 0.176470588 0.3 119 2 3 135 2L:11796907-11797013 7 crol FBtr0305262|FBtr0335473|FBtr0080261|FBtr0335476|FBtr0080260|FBtr0335474|FBtr0080262|FBtr0335475|FBtr0080263 11795170|11794325|11795494|11795167|11794325|11794325|11795170|11794325|11795170 11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124 GCAGCTA 7mer-A1 dme-miR-980-3p 2L - 11796821 11797006 3'utr crol FlyBase G7807.1 CGTGCCACCAGTGAGCCAGTGCTAGTGAGCCGAGCTGACGCGACTTCTCTAGATAGGACACACATCATAACAAGCGCACCCCATATAAGCAGCTAGTTGTATGTACAATAGTTTTAGCAGCGCGCTGGTTACGCTGATCGGTGGCCCCAAGCGGATATCGTGATACGCTGGGTTTCTAGGGTGTGT 126 11796921 0.844030463 28 112 658 0.880208333 1.324796718 0.276041667 0.365079365 0.583333333 126 16 7 169 2L:11796821-11797006 7 30 94 FBgn0020309 6740.04 140.5266667 216.61 0.004451012 0.213482613 0.138497761 3 3 3 0.1 dme-miR-1003-3p 6mer2-7 TGTGAG 2L 11810188 11810193 - 2L_11810188_11810193_- 0.999800818 0.999945712 0.999873265 0.00010246 CycY FBtr0333425 11810090 11811116 2L - 11810141 11810240 3'utr CycY FlyBase G10150.1 CGAGCGAGAGTTGCAAGGAGCACAGCGCAATATTAACCCAAAAGATTTGTGAGTAAATTAATGTACTAGACATATAAGGATACGAATTATATGCAAAATG 49 11810194 0.971613355 7 49 282 1 1.72427587 0.056603774 0.081632653 0.150943396 49 0 0 53 2L:11810141-11810240 6 CycY FBtr0333425 11810090 11811116 TGTGAG 6mer2-7 dme-miR-1003-3p 2L - 11810179 11810224 3'utr CycY FlyBase G7828.1 GGAGCACAGCGCAATATTAACCCAAAAGATTTGTGAGTAAATTAAT 23 11810194 0.967355399 4 22 119 0.948717949 1.568201724 0.128205128 0.47826087 0.692307692 23 2 0 37 2L:11810179-11810224 6 31.5 95 FBgn0032378 829.4 43.03666667 66.07 0.037979262 0.73193401 0.476767065 1 1 1 0.1 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 11810369 11810376 - 2L_11810369_11810376_- 0.625128239 0.625346258 0.625237249 0.00015422 CycY FBtr0333425 11810090 11811116 2L - 11810365 11810420 3'utr CycY FlyBase G10151.1 AATAACTCAATATGATTTCGTGTGATTCTTATATAGTTTCCATTTAGCTTTATATA 20 11810377 0.820306031 5 20 206 1 1.380211242 0.083333333 0.15 0.291666667 20 0 0 24 2L:11810365-11810420 8 CycY FBtr0333425 11810090 11811116 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 11810365 11810420 3'utr CycY FlyBase G7830.1 AATAACTCAATATGATTTCGTGTGATTCTTATATAGTTTCCATTTAGCTTTATATA 25 11810377 0.779495814 6 25 256 1 1.491361694 0.064516129 0.2 0.35483871 25 0 0 31 2L:11810365-11810420 8 14 96 FBgn0032378 829.4 43.03666667 66.07 0.016879672 0.325304004 0.211896473 1 1 1 0.1 dme-miR-31a-5p 6mer2-7 CTTGCC 2L 1181655 1181660 + 2L_1181655_1181660_+ 0.528988118 0.977076975 0.753032547 0.3168467 CG4896 FBtr0335394|FBtr0335395|FBtr0308698 1179902|1179230|1179230 1182454|1182454|1182454 2L + 1181586 1181662 3'utr CG4896 FlyBase G1009.1 TTGAAGCTAGCGTTGGGACTAAACGAGCCATTAGCGATGAATCTGACTACGTGGACTTCCAAAAACTTACTTGCCTG 14 1181639 0.799321 10 12 69 0.888888889 1.204119983 0.277777778 0.285714286 0.444444444 14 2 0 16 2L:1181586-1181662 6 CG4896 FBtr0308698|FBtr0335394|FBtr0335395 1179230|1179902|1179230 1182454|1182454|1182454 CTTGCC 6mer2-7 dme-miR-31a-5p 2L + 1181627 1181672 3'utr CG4896 FlyBase G803.1 TCTGACTACGTGGACTTCCAAAAACTTACTTGCCTGCTCTGCATGC 8 1181654 0.755305304 5 7 48 0.846153846 1.041392685 0 0.375 0.615384615 8 2 0 11 2L:1181627-1181672 6 5.5 97 FBgn0031319 314.3566667 11.06666667 17.08 0.01749605 0.496987952 0.322014052 16 1 8.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 118176 118182 - 2L_118176_118182_- 0.80196238 0.801962797 0.801962589 2.83E-07 CG4822 FBtr0100309|FBtr0100309|FBtr0100309|FBtr0100310|FBtr0100310|FBtr0100310|FBtr0330646|FBtr0330646|FBtr0330646 117077|117077|117077|117172|117172|117172|117077|117077|117077 119269|119269|119269|119426|119426|119426|119201|119201|119201 2L - 118136 118303 3'utr CG4822 FlyBase G6311.1 CGTACATCAAGCTTAAGTTCTACATGAACATCGTTCTTGCTTTACTGGTGGGTTCGCTCTACTTTGGTATGGGAACCTCGGCCTCTAAAGCGCTTTTTAACTTCGGTTTCATGTTCACCATTGTGATAGCATACCTCTACCTTCCTATGATGCCTGTGCTCTTATATT 677 118183 0.799572564 41 607 5604 0.90295858 1.174954362 0.146745562 0.209748892 0.366863905 677 32 50 763 2L:118136-118303 7 CG4822 FBtr0100310|FBtr0100310|FBtr0100310|FBtr0330646|FBtr0330646|FBtr0330646|FBtr0100309|FBtr0100309|FBtr0100309 117172|117172|117172|117077|117077|117077|117077|117077|117077 119426|119426|119426|119201|119201|119201|119269|119269|119269 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 118136 118245 3'utr CG4822 FlyBase G4927.1 CTACTTTGGTATGGGAACCTCGGCCTCTAAAGCGCTTTTTAACTTCGGTTTCATGTTCACCATTGTGATAGCATACCTCTACCTTCCTATGATGCCTGTGCTCTTATATT 400 118183 0.793520742 26 359 3210 0.904040404 1.252853031 0.131313131 0.3625 0.570707071 400 28 29 537 2L:118136-118245 7 441 98 FBgn0031220 2984.836667 134.1266667 204.7566667 0.147746778 3.287936776 2.153776027 1 1 1 0.1 dme-miR-282-5p 6mer2-7 GAGGCT 2L 1181768 1181773 + 2L_1181768_1181773_+ 0.99964708 0.994799917 0.997223498 0.003427488 CG4896 FBtr0335394|FBtr0335395|FBtr0308698 1179902|1179230|1179230 1182454|1182454|1182454 2L + 1181722 1181790 3'utr CG4896 FlyBase G1010.1 TCTACACAAGGAGAATCTGGACAAGCTTAAACGGAATCCCGCAGTTGAGGCTGGCACGGATGAGGGTCT 51 1181767 0.918268572 5 49 173 0.966101695 1.45484486 0.372881356 0.098039216 0.220338983 51 1 1 57 2L:1181722-1181790 6 CG4896 FBtr0308698|FBtr0335394|FBtr0335395 1179230|1179902|1179230 1182454|1182454|1182454 GAGGCT 6mer2-7 dme-miR-282-5p 2L + 1181727 1181791 3'utr CG4896 FlyBase G804.1 ACAAGGAGAATCTGGACAAGCTTAAACGGAATCCCGCAGTTGAGGCTGGCACGGATGAGGGTCTA 33 1181739 0.842965586 4 32 111 0.955555556 1.633468456 0.288888889 0.242424242 0.444444444 33 2 0 43 2L:1181727-1181791 6 25.5 99 FBgn0031319 314.3566667 11.06666667 17.08 0.081118051 2.304216867 1.492974239 1 29 15 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2L 1181949 1181954 + 2L_1181949_1181954_+ 0.999992142 0.999669254 0.999830698 0.000228254 CG4896 FBtr0335394|FBtr0335395|FBtr0308698 1179902|1179230|1179230 1182454|1182454|1182454 2L + 1181872 1182078 3'utr CG4896 FlyBase G1011.1 AGGAACGCAGGCTGAAGTACGGTGAGAGCGATCCTCCTCCACCAAATAGGAGCCGGGAGCGTTTCGAGCAAGAGATAAAGACTTTGCAGTCGCGCCAGAAGGATTCTTTTGGCGCCACTGCAGCCATGCCCATCAGTTCGACCAACGTGGGCAGCCGCCTGATGCAGAAGATGGGCTGGTCGGAGGGCCAGGGACTGGGCAAAAAGA 461 1181956 0.949576558 19 438 1900 0.952198853 1.998259338 0.544933078 0.114967462 0.219885277 461 21 4 498 2L:1181872-1182078 6 CG4896 FBtr0308698|FBtr0335394|FBtr0335395 1179230|1179902|1179230 1182454|1182454|1182454 AAGACT 6mer3-8 dme-miR-14-3p 2L + 1181862 1182074 3'utr CG4896 FlyBase G805.1 GATCGTGCCAAGGAACGCAGGCTGAAGTACGGTGAGAGCGATCCTCCTCCACCAAATAGGAGCCGGGAGCGTTTCGAGCAAGAGATAAAGACTTTGCAGTCGCGCCAGAAGGATTCTTTTGGCGCCACTGCAGCCATGCCCATCAGTTCGACCAACGTGGGCAGCCGCCTGATGCAGAAGATGGGCTGGTCGGAGGGCCAGGGACTGGGCAAA 333 1181956 0.8896486 20 327 1379 0.979338843 2.374748346 0.516528926 0.345345345 0.549586777 333 9 1 474 2L:1181862-1182074 6 350 100 FBgn0031319 314.3566667 11.06666667 17.08 1.113385009 31.62650602 20.49180328 -7 -7 -7 0.1 dme-miR-276a-3p 8mer-A1 AGTTCCTA 2L 11827385 11827392 - 2L_11827385_11827392_- 0.637906983 0.63789443 0.637900706 8.91E-06 esc FBtr0080325 11827202 11827459 2L - 11827335 11827448 5'utr esc FlyBase G10163.1 GGCGCAACCACAAACCAAATCTCACGTGGCCAAAACTTACAACATTTCCCTCAATTAGTTCCTAGTTGGTTAGCATTAAGATATAGAATTACGCTCCTGTGCTGTTCCAAATTA 83 11827403 0.988596207 15 76 710 0.911111111 1.612783857 0.044444444 0.084337349 0.155555556 83 7 1 82 2L:11827335-11827448 8 esc FBtr0080325 11827202 11827459 AGTTCCTA 8mer-A1 dme-miR-276a-3p 2L - 11827336 11827422 5'utr esc FlyBase G7840.1 TGGCCAAAACTTACAACATTTCCCTCAATTAGTTCCTAGTTGGTTAGCATTAAGATATAGAATTACGCTCCTGTGCTGTTCCAAATT 49 11827403 0.769280404 7 42 388 0.869565217 1.477121255 0.043478261 0.326530612 0.52173913 49 8 1 60 2L:11827336-11827422 8 34 101 FBgn0000588 215.62 15.44 23.56 0.157684816 2.202072539 1.443123939 11 11 11 0.1 dme-bantam-3p 6mer3-8 TGATCT 2L 118798 118803 - 2L_118798_118803_- 0.997431935 0.997922788 0.997677362 0.000347119 CG4822 FBtr0100309|FBtr0100310|FBtr0330646 117077|117172|117077 119269|119426|119201 2L - 118514 118873 3'utr CG4822 FlyBase G6313.1 GGTTTAGACGATTTATCGAGTTCACAATGCATTGCCCTACTCAAAGTTTTGGCCGCCGGGGGGCGCACTGTGATCTGCTCCATCCATACGCCATCTGCCAAGATCTTCGAGATGCTCGATGCAGTCTACGTTCTAGCCGAAGGCCAGTGCGTCTACCAAGGAAAGGGGTCCAACATTGTACCTTTCTTGAAGAACTTTGGGCTTTGTTGTCCAATAACCTACAACCCGGCTGACTTCATTATCGAAGTTGCTTGCCTTGAGTATGGCGGGTCCTATCACGAGCCAATGGTAGAAGCCGTGGGCAACGGCAAAGTTGCGCGATGGAGTCCTCCAGCAGTGGAAGGTGAAACAACAACAACC 356 118798 0.969903548 64 339 2197 0.956416465 1.897627091 0.341404358 0.137640449 0.256658596 356 14 4 395 2L:118514-118873 6 CG4822 FBtr0100310|FBtr0330646|FBtr0100309 117172|117077|117077 119426|119201|119269 TGATCT 6mer3-8 dme-bantam-3p 2L - 118491 118868 3'utr CG4822 FlyBase G4930.1 AGACGATTTATCGAGTTCACAATGCATTGCCCTACTCAAAGTTTTGGCCGCCGGGGGGCGCACTGTGATCTGCTCCATCCATACGCCATCTGCCAAGATCTTCGAGATGCTCGATGCAGTCTACGTTCTAGCCGAAGGCCAGTGCGTCTACCAAGGAAAGGGGTCCAACATTGTACCTTTCTTGAAGAACTTTGGGCTTTGTTGTCCAATAACCTACAACCCGGCTGACTTCATTATCGAAGTTGCTTGCCTTGAGTATGGCGGGTCCTATCACGAGCCAATGGTAGAAGCCGTGGGCAACGGCAAAGTTGCGCGATGGAGTCCTCCAGCAGTGGAAGGTGAAACAACAACAACCAAAACCGACACCACATCGGGGGC 243 118798 0.975629668 54 233 1471 0.948275862 2.51851394 0.353448276 0.341563786 0.540229885 243 18 0 330 2L:118491-118868 6 110.5 102 FBgn0031220 2984.836667 134.1266667 204.7566667 0.037020451 0.823848104 0.539664968 -5 -5 -5 0.1 dme-miR-1007-3p 6mer3-8 TGAGCT 2L 118973 118978 - 2L_118973_118978_- 0.834239796 0.591714202 0.712976999 0.171491496 CG4822 FBtr0100309|FBtr0100310|FBtr0330646 117077|117172|117077 119269|119426|119201 2L - 118935 119065 3'utr CG4822 FlyBase G6314.1 TTTGGGAATGTTGCGCCTAAAAGACACCCTAAACACCATGGCTCAAAAGCTATCTGGGGGTGAGCGAAAGCGTTTATGCATTGCCCTTGAGCTGGTCAACAACCCACCTGTCATCTTTCTAGATGAACCTA 50 118984 0.748559659 20 49 277 0.984375 1.799340549 0.125 0.26 0.421875 50 1 0 63 2L:118935-119065 6 CG4822 FBtr0100310|FBtr0330646|FBtr0100309 117172|117077|117077 119426|119201|119269 TGAGCT 6mer3-8 dme-miR-1007-3p 2L - 118932 119066 3'utr CG4822 FlyBase G4931.1 TTTTGGGAATGTTGCGCCTAAAAGACACCCTAAACACCATGGCTCAAAAGCTATCTGGGGGTGAGCGAAAGCGTTTATGCATTGCCCTTGAGCTGGTCAACAACCCACCTGTCATCTTTCTAGATGAACCTACAA 50 118956 0.745907414 20 48 271 0.947368421 1.857332496 0.065789474 0.42 0.618421053 50 4 0 72 2L:118932-119066 6 25.5 103 FBgn0031220 2984.836667 134.1266667 204.7566667 0.008543181 0.190118793 0.12453807 6 -22 -8 0.1 dme-miR-14-3p 7mer-A1 AGACTGA 2L 119231 119237 - 2L_119231_119237_- 0.823349523 0.823349544 0.823349534 0 CG4822 FBtr0100309 117077 119269 2L - 119140 119282 lincRNA_intron-lincRNA_exon CG4822 FlyBase G6315.1 AGTGGATTACTGAATTGCGTTCCCATAAATATTGGTGTAATTCATAGACTGATGTCCTGGACTCACAGTTTACCGTACTAGAAATGATGATTTTGGCGGCAAACTTGAAGTTGGGAAAAGAACTAAATTTAAAACAAAAGCTA 189 119238 0.984613655 23 179 1440 0.947136564 1.48734042 0.348017621 0.169312169 0.308370044 189 6 6 215 2L:119140-119282 7 CG4822 FBtr0100309 117077 119269 AGACTGA 7mer-A1 dme-miR-14-3p 2L - 119140 119255 3'utr CG4822 FlyBase G4932.1 AATATTGGTGTAATTCATAGACTGATGTCCTGGACTCACAGTTTACCGTACTAGAAATGATGATTTTGGCGGCAAACTTGAAGTTGGGAAAAGAACTAAATTTAAAACAAAAGCTA 131 119238 0.921793217 20 123 950 0.921658986 1.397940009 0.313364055 0.419847328 0.649769585 131 10 7 200 2L:119140-119255 7 114.5 104 FBgn0031220 2984.836667 134.1266667 204.7566667 0.038360558 0.85367066 0.559200352 1 1 1 0.1 dme-miR-988-3p 6mer3-8 ACAAGG 2L 11984883 11984888 - 2L_11984883_11984888_- 0.78369594 0.646253671 0.714974806 0.097186312 CG6686 FBtr0301171 11984325 11987330 2L - 11984876 11984920 5'utr CG6686 FlyBase G10171.1 CTTCCACTTTGGACCGATTACAGACTTTAAGGACAAGGAGACCTT 29 11984893 0.967807585 3 27 153 0.9375 1 0.15625 0.142857143 0.25 28 0 2 30 2L:11984876-11984920 6 CG6686 FBtr0301171 11984325 11987330 ACAAGG 6mer3-8 dme-miR-988-3p 2L - 11984869 11984918 5'utr CG6686 FlyBase G7849.1 TCCACTTTGGACCGATTACAGACTTTAAGGACAAGGAGACCTTCAAGCCC 12 11984893 0.973133183 3 11 62 0.941176471 0.903089987 0.058823529 0.416666667 0.588235294 12 0 1 16 2L:11984869-11984918 6 14.5 105 FBgn0032388 1118.523333 42.80333333 65.72 0.01296352 0.338758664 0.220632988 5 5 5 0.1 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2L 11985312 11985317 - 2L_11985312_11985317_- 1 0.999996777 0.999998389 2.26E-06 CG6686 FBtr0301171 11984325 11987330 2L - 11985309 11985357 5'utr CG6686 FlyBase G10173.1 GGCGGGCAACCGTAATGAGGACTCCAATGACATGATGGACTTTGACAAG 17 11985322 0.960565574 4 17 85 1 1.322219295 0.19047619 0.176470588 0.333333333 17 0 0 21 2L:11985309-11985357 6 CG6686 FBtr0301171 11984325 11987330 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2L - 11985256 11985341 5'utr CG6686 FlyBase G7850.1 GAGGACTCCAATGACATGATGGACTTTGACAAGACCGAACAGCCGGAGGAGCATATGGAAACACATACCGATGAGCCTGCCCTGAG 22 11985322 0.961757567 5 21 104 0.971428571 1.531478917 0.2 0.363636364 0.6 22 1 0 34 2L:11985256-11985341 6 16.5 106 FBgn0032388 1118.523333 42.80333333 65.72 0.014751592 0.385483997 0.251065125 5 5 5 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 2L 11985976 11985982 - 2L_11985976_11985982_- 0.521223528 0.521223495 0.521223512 0 CG6686 FBtr0301171 11984325 11987330 2L - 11985857 11986018 5'utr CG6686 FlyBase G10176.1 TGAAATGGAAGGTCAGCCGAAAAAGCGCAAGAACTTTGTGATTGGTGAGAATATGGATGAGGAGCGGGAGCACAGACGCAAGCTCCTGGAGATTAAGACCAAATTAGCCGGCAAGCGTTTGGAAACCTTGGAGGACACCAATCTGCAGCTAGCATCGGACAC 302 11985976 0.765601636 18 295 1655 0.979591837 2.049218023 0.131195335 0.11589404 0.221574344 302 5 2 336 2L:11985857-11986018 7 CG6686 FBtr0301171 11984325 11987330 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 11985896 11986011 5'utr CG6686 FlyBase G7852.1 GAAGGTCAGCCGAAAAAGCGCAAGAACTTTGTGATTGGTGAGAATATGGATGAGGAGCGGGAGCACAGACGCAAGCTCCTGGAGATTAAGACCAAATTAGCCGGCAAGCGTTTGGA 181 11985976 0.969730041 13 178 1007 0.988847584 2.123851641 0.130111524 0.342541436 0.557620818 181 2 1 266 2L:11985896-11986011 7 183 107 FBgn0032388 1118.523333 42.80333333 65.72 0.163608567 4.275367962 2.784540475 -6 -6 -6 0.1 dme-miR-1006-3p 6mer2-7 GAATTT 2L 11996408 11996413 + 2L_11996408_11996413_+ 0.999871058 0.999977094 0.999924076 7.50E-05 Qtzl FBtr0080288|FBtr0339524 11996242|11996242 11996469|11996723 2L + 11996377 11996451 3'utr Qtzl FlyBase G4156.1 GTCAATTAGGATGAGTGTTTCTAGGCTAAAAGAATTTTCCTTATCCTTCTAAATCCGATACCATATTTATGTAAC 15 11996430 0.956330228 11 14 152 0.882352941 1.176091259 0.058823529 0.133333333 0.235294118 15 2 0 15 2L:11996377-11996451 6 Qtzl FBtr0080288|FBtr0339524 11996242|11996242 11996469|11996723 GAATTT 6mer2-7 dme-miR-1006-3p 2L + 11996382 11996446 3'utr Qtzl FlyBase G3261.1 TTAGGATGAGTGTTTCTAGGCTAAAAGAATTTTCCTTATCCTTCTAAATCCGATACCATATTTAT 19 11996412 0.723687559 11 16 173 0.740740741 1.301029996 0 0.263157895 0.481481481 19 7 0 20 2L:11996382-11996446 6 11 108 FBgn0051864 168.2133333 28.36333333 43.04666667 0.065393152 0.387824656 0.255536627 -22 -4 -13 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2L 12036163 12036168 - 2L_12036163_12036168_- 0.868038577 0.971231419 0.919634998 0.072968329 Tom70 FBtr0080311|FBtr0080309|FBtr0080310 12036001|12036001|12035982 12036270|12036270|12036270 2L - 12036144 12036184 3'utr Tom70 FlyBase G10197.1 AAGTTAATATCGACCATACCTGTTATTTATATATATATATA 43 12036162 0.728928565 6 41 406 0.96 1.204119983 0 0.162790698 0.28 43 0 2 48 2L:12036144-12036184 6 Tom70 FBtr0080310|FBtr0080309|FBtr0080311 12035982|12036001|12036001 12036270|12036270|12036270 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2L - 12036141 12036184 3'utr Tom70 FlyBase G7868.1 AAGTTAATATCGACCATACCTGTTATTTATATATATATATATAA 29 12036162 0.735522856 4 29 257 1 1.653212514 0 0.448275862 0.644444444 29 0 0 45 2L:12036141-12036184 6 36 109 FBgn0032397 498.9933333 27.16 41.57 0.072145252 1.325478645 0.866009141 -6 -6 -6 0.1 dme-miR-79-3p 6mer3-8 TAGCTT 2L 12045461 12045466 - 2L_12045461_12045466_- 0.999989034 0.999616579 0.999802806 0.000263327 CG6770 FBtr0080306 12045341 12045765 2L - 12045405 12045488 3'utr CG6770 FlyBase G10210.1 AAAGAAAGGCACATACTACTCTTAGCTTCTAATATATTCCTAAACTAATTCAGACTTGCAAGTTTTAGTTGCTAAGCCTTAGAG 55 12045467 0.907090788 16 54 414 0.985714286 1.537819095 0.085714286 0.218181818 0.385714286 55 0 1 69 2L:12045405-12045488 6 CG6770 FBtr0080306 12045341 12045765 TAGCTT 6mer3-8 dme-miR-79-3p 2L - 12045410 12045488 3'utr CG6770 FlyBase G7875.2 AAAGAAAGGCACATACTACTCTTAGCTTCTAATATATTCCTAAACTAATTCAGACTTGCAAGTTTTAGTTGCTAAGCCT 35 12045467 0.932264527 12 33 278 0.888888889 1.204119983 0.037037037 0.371428571 0.592592593 35 4 2 48 2L:12045410-12045488 6 26 110 FBgn0032400 867.8766667 144.29 222.0833333 0.029958174 0.180192668 0.117073171 1 1 1 0.1 dme-miR-1006-3p 8mer-A1 CGAATTTA 2L 12045681 12045688 - 2L_12045681_12045688_- 0.671697441 0.671697472 0.671697457 7.07E-08 CG6770 FBtr0080306 12045341 12045765 2L - 12045668 12045787 stop_codon CG6770 FlyBase G10211.2 AGCCGCCGCCTGCAAGAACTGATGCAGGGCATCGACGGAGGCGGTGGAACAGGAGAGAAAGAAGTAACGGGGCCGCGCTGAAAGGAGAAAAGAAATCTTCGAATTTAAAAGGAAAGCAAA 122 12045689 0.979955211 8 116 547 0.951048951 2.133538908 0.181818182 0.163934426 0.286713287 122 7 0 136 2L:12045668-12045787 8 CG6770 FBtr0080306 12045341 12045765 CGAATTTA 8mer-A1 dme-miR-1006-3p 2L - 12045670 12045740 3'utr CG6770 FlyBase G7878.1 AACAGGAGAGAAAGAAGTAACGGGGCCGCGCTGAAAGGAGAAAAGAAATCTTCGAATTTAAAAGGAAAGCA 67 12045689 0.959389796 5 65 316 0.97826087 1.954242509 0.097826087 0.268656716 0.467391304 67 2 0 90 2L:12045670-12045740 8 84.5 111 FBgn0032400 867.8766667 144.29 222.0833333 0.097364065 0.58562617 0.380487805 1 1 1 0.1 dme-miR-999-3p 8mer-A1 AGTTAACA 2L 12051995 12052002 - 2L_12051995_12052002_- 0.643926235 0.642916738 0.643421487 0.000713824 JhI-21 FBtr0305089|FBtr0342608|FBtr0346427|FBtr0089655|FBtr0089656 12051753|12051753|12051753|12051753|12051753 12052229|12052229|12052229|12052229|12052229 2L - 12051948 12052020 3'utr JhI-21 FlyBase G10216.1 TTTTTTAGCGATCCCCTCAGTTAACAGGTTTTTGCAAAACCCCCGCCTTTTTGGCCCACTTCCCACAAAAGTT 18 12052005 0.962218537 8 15 119 0.833333333 0.698970004 0.166666667 0 0 18 1 2 15 2L:12051948-12052020 8 JhI-21 FBtr0089656|FBtr0346427|FBtr0089655|FBtr0305089|FBtr0342608 12051753|12051753|12051753|12051753|12051753 12052229|12052229|12052229|12052229|12052229 AGTTAACA 8mer-A1 dme-miR-999-3p 2L - 12051956 12052020 3'utr JhI-21 FlyBase G7882.1 TTTTTTAGCGATCCCCTCAGTTAACAGGTTTTTGCAAAACCCCCGCCTTTTTGGCCCACTTCCCA 8 12051973 0.969920619 7 8 53 1 1.041392685 0.181818182 0.375 0.545454545 8 0 0 11 2L:12051956-12052020 8 8.5 112 FBgn0028425 1112.883333 63.32333333 95.85666667 0.007637818 0.134231721 0.088674062 3 -29 -13 0.1 dme-bantam-3p 6mer3-8 TGATCT 2L 12100649 12100654 + 2L_12100649_12100654_+ 0.999802365 0.556644898 0.778223631 0.313359673 Ced-12 FBtr0080330 12100540 12100839 2L + 12100627 12100697 3'utr Ced-12 FlyBase G4189.1 AACATAATCGTATTCTCCGATCTGATCTTCTACTAGTATTACTTGTGCAATTCCCCGAACACAAAATGAAC 38 12100649 0.989470837 11 37 354 0.977777778 1.643452676 0.2 0.184210526 0.311111111 38 1 0 44 2L:12100627-12100697 6 Ced-12 FBtr0080330 12100540 12100839 TGATCT 6mer3-8 dme-bantam-3p 2L + 12100627 12100693 3'utr Ced-12 FlyBase G3274.1 AACATAATCGTATTCTCCGATCTGATCTTCTACTAGTATTACTTGTGCAATTCCCCGAACACAAAAT 28 12100649 0.989335581 12 24 238 0.846153846 1.51851394 0.384615385 0.392857143 0.564102564 28 6 0 33 2L:12100627-12100693 6 24.5 113 FBgn0032409 609.2533333 28.43666667 43.38333333 0.040213157 0.861563709 0.564733 0 0 0 0.1 dme-bantam-3p 7mer-m8 TGATCTC 2L 12100792 12100798 - 2L_12100792_12100798_- 0.661613217 0.661606886 0.661610051 4.45E-06 Patsas FBtr0080362 12100763 12101247 2L - 12100777 12100819 3'utr Patsas FlyBase G10238.1 TGTATAAAATGTGTTATTTAATGATCTCTATATATTATATACC 15 12100798 0.929621022 6 13 180 0.894736842 1.230448921 0.684210526 0.266666667 0.421052632 15 2 0 17 2L:12100777-12100819 7 Patsas FBtr0080362 12100763 12101247 TGATCTC 7mer-m8 dme-bantam-3p 2L - 12100782 12100818 3'utr Patsas FlyBase G7899.1 GTATAAAATGTGTTATTTAATGATCTCTATATATTAT 10 12100791 0.887344079 5 9 113 0.933333333 1.146128036 0.6 0.4 0.6 10 1 0 14 2L:12100782-12100818 7 12.5 114 FBgn0029137 12.51333333 0.613333333 0.946666667 0.99893447 20.38043478 13.20422535 0 -7 -3.5 0.1 dme-miR-970-3p 8mer-A1 TCTTATGA 2L 12107479 12107486 - 2L_12107479_12107486_- 0.630790218 0.630790218 0.630790218 0 Rab6 FBtr0346437|FBtr0080361 12107219|12107285 12108172|12108172 2L - 12107475 12107540 3'utr Rab6 FlyBase G10239.1 GCGAACGCGACTGCTAACTGGAACTGTGGATGGCATAGGACTTGGCCACGTGCATCTTATGAATAA 10 12107498 0.938815867 6 9 54 0.9 0.954242509 0.4 0 0 10 1 0 9 2L:12107475-12107540 8 Rab6 FBtr0346437|FBtr0080361 12107219|12107285 12108172|12108172 TCTTATGA 8mer-A1 dme-miR-970-3p 2L - 12107470 12107548 3'utr Rab6 FlyBase G7901.1 TTAGCACAGCGAACGCGACTGCTAACTGGAACTGTGGATGGCATAGGACTTGGCCACGTGCATCTTATGAATAAATATA 10 12107516 0.963745132 8 10 55 1 1.079181246 0.083333333 0.2 0.333333333 10 0 0 12 2L:12107470-12107548 8 3 115 FBgn0015797 1477.666667 97.91333333 149.3266667 0.002030228 0.030639341 0.020090183 12 30 21 0.1 dme-miR-317-3p 8mer-A1 TGTGTTCA 2L 12107651 12107658 - 2L_12107651_12107658_- 0.631136777 0.631136775 0.631136776 0 Rab6 FBtr0346437|FBtr0080361 12107219|12107285 12108172|12108172 2L - 12107636 12107688 3'utr Rab6 FlyBase G10240.1 CCAGCAGTCGTAGATACCACGCAGCCAGTCTGTGTTCAATGATTCCACCAGCC 63 12107659 0.828854345 9 58 416 0.943661972 1.826074803 0.183098592 0.111111111 0.211267606 63 4 0 67 2L:12107636-12107688 8 Rab6 FBtr0346437|FBtr0080361 12107219|12107285 12108172|12108172 TGTGTTCA 8mer-A1 dme-miR-317-3p 2L - 12107626 12107690 3'utr Rab6 FlyBase G7902.1 CTCCAGCAGTCGTAGATACCACGCAGCCAGTCTGTGTTCAATGATTCCACCAGCCAGGCATTTTG 26 12107659 0.97817345 8 24 159 0.941176471 1.505149978 0.205882353 0.269230769 0.441176471 26 2 0 32 2L:12107626-12107690 8 38 116 FBgn0015797 1477.666667 97.91333333 149.3266667 0.025716219 0.388098318 0.254475646 1 1 1 0.1 dme-miR-252-5p 7mer-m8 GTACTTA 2L 12107740 12107746 - 2L_12107740_12107746_- 0.53617314 0.562931243 0.549552192 0.018920834 Rab6 FBtr0346437|FBtr0080361 12107219|12107285 12108172|12108172 2L - 12107713 12107763 3'utr Rab6 FlyBase G10241.1 AAAAAACCCAAGACCATGTACTTATGTCAGGCCAGGCGGTCCCAGGATCCT 18 12107747 0.958349405 3 17 84 1 1.255272505 0.055555556 0 0 18 0 0 18 2L:12107713-12107763 7 Rab6 FBtr0346437|FBtr0080361 12107219|12107285 12108172|12108172 GTACTTA 7mer-m8 dme-miR-252-5p 2L - 12107718 12107762 3'utr Rab6 FlyBase G7903.1 AAAAACCCAAGACCATGTACTTATGTCAGGCCAGGCGGTCCCAGG 13 12107747 0.966781849 2 12 64 0.944444444 1.230448921 0 0.384615385 0.555555556 13 1 0 17 2L:12107718-12107762 7 14.5 117 FBgn0015797 1477.666667 97.91333333 149.3266667 0.009812768 0.148090148 0.097102549 1 1 1 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2L 12171289 12171294 - 2L_12171289_12171294_- 0.73906824 0.947715328 0.843391784 0.147535779 CG6583 FBtr0080358 12171202 12171697 2L - 12171234 12171333 3'utr CG6583 FlyBase G10249.1 CCGAAAATGCTTACGTTTGACATATTTATTACTAGTATTTACCTGCCATATCCGAATAACCACTACCATATCGAAAAACCAGTAAATTGTACACACAGAA 20 12171295 0.986393499 6 17 144 0.923076923 1.079181246 0.038461538 0.3 0.461538462 20 1 1 24 2L:12171234-12171333 6 CG6583 FBtr0080358 12171202 12171697 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2L - 12171248 12171336 3'utr CG6583 FlyBase G7909.1 ATTCCGAAAATGCTTACGTTTGACATATTTATTACTAGTATTTACCTGCCATATCCGAATAACCACTACCATATCGAAAAACCAGTAAA 17 12171296 0.983026609 9 17 134 1 1.342422681 0.045454545 0.176470588 0.363636364 17 0 0 22 2L:12171248-12171336 6 12.5 118 FBgn0032420 73.66666667 8.476666667 12.93333333 0.169683258 1.474636256 0.966494845 1 2 1.5 0.1 dme-miR-184-3p 8mer-A1 TCCGTCCA 2L 12173897 12173904 + 2L_12173897_12173904_+ 0.631136357 0.631136358 0.631136357 0 crok FBtr0080342 12173602 12174091 2L + 12173829 12173970 3'utr crok FlyBase G4207.1 GAGCGATGTGTAATCAAGTGCCTTTTCTGTAACGGACTCGTATTGTAACTTAAGCCTGGAATACTATTTCCGTCCAAAAAATATCTTACGCCTATGACATTCCATCTCGTAAACTGAATCTTGTAATACTTTCTATTTTCTA 765 12173896 0.979153126 20 743 5110 0.973952435 2.633468456 0.005662514 0.130718954 0.246885617 765 22 1 860 2L:12173829-12173970 8 crok FBtr0080342 12173602 12174091 TCCGTCCA 8mer-A1 dme-miR-184-3p 2L + 12173828 12173960 3'utr crok FlyBase G3289.1 TGAGCGATGTGTAATCAAGTGCCTTTTCTGTAACGGACTCGTATTGTAACTTAAGCCTGGAATACTATTTCCGTCCAAAAAATATCTTACGCCTATGACATTCCATCTCGTAAACTGAATCTTGTAATACTTT 477 12173896 0.978275238 23 460 3084 0.958333333 2.139879086 0.005555556 0.368972746 0.581944444 477 26 4 690 2L:12173828-12173960 8 568.5 119 FBgn0032421 76 9.133333333 13.88666667 7.480263158 62.24452555 40.93855017 1 1 1 0.1 dme-miR-932-5p 6mer3-8 GGAATT 2L 122680 122685 - 2L_122680_122685_- 0.59172085 0.552569636 0.572145243 0.027684079 CG3164 FBtr0078153|FBtr0078155|FBtr0100379|FBtr0078154 122622|122622|122622|122622 123128|123128|123128|123128 2L - 122668 122710 3'utr CG3164 FlyBase G6327.1 TATTCAAGGTACTTTAAGACCCTTTGGAATTTTTTGTAATATT 11 122687 0.755698906 5 10 90 1 1.230448921 0 0.363636364 0.588235294 11 0 0 17 2L:122668-122710 6 CG3164 FBtr0100379|FBtr0078154|FBtr0078153|FBtr0078155 122622|122622|122622|122622 123128|123128|123128|123128 GGAATT 6mer3-8 dme-miR-932-5p 2L - 122639 122703 3'utr CG3164 FlyBase G4943.1 GGTACTTTAAGACCCTTTGGAATTTTTTGTAATATTTTCTTATTACAGGTTTAGAATAAACATTT 17 122678 0.819502112 10 15 162 0.863636364 0.67669361 0.090909091 0.294117647 0.454545455 17 0 3 19 2L:122639-122703 6 9 120 FBgn0025683 1716.21 73.79 112.3166667 0.005244113 0.121967746 0.080130583 2 -7 -2.5 0.1 dme-miR-8-3p 7mer-A1 AGTATTA 2L 12403424 12403430 - 2L_12403424_12403430_- 0.816961737 0.643099985 0.730030861 0.122938787 vir-1 FBtr0100125|FBtr0334761|FBtr0080390|FBtr0080389|FBtr0305263 12403268|12403268|12403268|12403268|12403268 12403580|12403580|12403580|12403580|12403580 2L - 12403414 12403444 3'utr vir-1 FlyBase G10253.1 TTTCACAGACAACGAGTATTATGTATGCAAG 6 12403423 0.956170905 3 6 29 1 0.954242509 0.222222222 0.5 0.666666667 6 0 0 9 2L:12403414-12403444 7 vir-1 FBtr0305263|FBtr0080389|FBtr0080390|FBtr0334761|FBtr0100125 12403268|12403268|12403268|12403268|12403268 12403580|12403580|12403580|12403580|12403580 AGTATTA 7mer-A1 dme-miR-8-3p 2L - 12403418 12403446 3'utr vir-1 FlyBase G7913.1 ATTTTCACAGACAACGAGTATTATGTATG 10 12403423 0.644779254 3 10 54 1 1.146128036 0 0.4 0.571428571 10 0 0 14 2L:12403418-12403446 7 8 121 FBgn0043841 3920.323333 419.3833333 639.8233333 0.002040648 0.019075627 0.012503451 -7 -7 -7 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2L 12403483 12403489 - 2L_12403483_12403489_- 0.823349524 0.823343912 0.823346718 3.96E-06 vir-1 FBtr0100125|FBtr0334761|FBtr0080390|FBtr0080389|FBtr0305263 12403268|12403268|12403268|12403268|12403268 12403580|12403580|12403580|12403580|12403580 2L - 12403453 12403525 3'utr vir-1 FlyBase G10254.1 GCTTGTAAACATAAAACGAGGATATCTCTGAGAGATCCAAAGAAATCGGCGCTCATTTCATCCGTAATTTATC 24 12403497 0.817183334 5 22 114 0.933333333 1.447158031 0.1 0.208333333 0.366666667 24 2 0 28 2L:12403453-12403525 7 vir-1 FBtr0305263|FBtr0080389|FBtr0080390|FBtr0334761|FBtr0100125 12403268|12403268|12403268|12403268|12403268 12403580|12403580|12403580|12403580|12403580 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 12403457 12403513 3'utr vir-1 FlyBase G7914.1 AAAACGAGGATATCTCTGAGAGATCCAAAGAAATCGGCGCTCATTTCATCCGTAATT 24 12403497 0.730113815 8 21 110 0.857142857 0.77815125 0.142857143 0.333333333 0.542857143 24 1 4 30 2L:12403457-12403513 7 16.5 122 FBgn0043841 3920.323333 419.3833333 639.8233333 0.004208837 0.039343481 0.025788369 8 8 8 0.1 dme-miR-277-3p 6mer2-7 GCATTT 2L 12403547 12403552 - 2L_12403547_12403552_- 0.99958216 0.905585082 0.952583621 0.066465987 vir-1 FBtr0100125|FBtr0334761|FBtr0080390|FBtr0080389|FBtr0305263 12403268|12403268|12403268|12403268|12403268 12403580|12403580|12403580|12403580|12403580 2L - 12403539 12403756 stop_codon vir-1 FlyBase G10255.1 ATATCGAGGAGAACTTTGTGCCCATTGACCTATCCAACGATATAGCCGTCAACGATTTGGCTGCCGCAGATCCCAATTTTCCCATCAATGAAGATGCCGAGTTCATTGTGCACCCAGCTGTAATCAGAACTATGCCTATGTTCGAGAAGCTTTCTTTAGGAGAGCCTGCGAAATGAGGTTTCTAAGTCTCTCCCACTAGTCTAGGCATTTTCTTTTAG 70 12403555 0.978626008 31 63 423 0.91025641 1.851258349 0.192307692 0.1 0.192307692 70 7 0 71 2L:12403539-12403756 6 vir-1 FBtr0305263|FBtr0080389|FBtr0080390|FBtr0334761|FBtr0100125 12403268|12403268|12403268|12403268|12403268 12403580|12403580|12403580|12403580|12403580 GCATTT 6mer2-7 dme-miR-277-3p 2L - 12403546 12403665 stop_codon vir-1 FlyBase G7915.1 AGATGCCGAGTTCATTGTGCACCCAGCTGTAATCAGAACTATGCCTATGTTCGAGAAGCTTTCTTTAGGAGAGCCTGCGAAATGAGGTTTCTAAGTCTCTCCCACTAGTCTAGGCATTTT 26 12403555 0.977444407 14 26 171 1 1.612783857 0.341463415 0.461538462 0.658536585 26 0 0 41 2L:12403546-12403665 6 16 123 FBgn0043841 3920.323333 419.3833333 639.8233333 0.004081296 0.038151254 0.025006903 3 3 3 0.1 dme-miR-1003-3p 6mer2-7 TGTGAG 2L 12426966 12426971 - 2L_12426966_12426971_- 0.99999994 0.999998848 0.999999394 7.78E-07 CG5446 FBtr0080388|FBtr0333093|FBtr0333094 12426898|12426898|12426629 12427225|12427225|12427225 2L - 12426938 12426988 3'utr CG5446 FlyBase G10266.1 AAGTAAAGTAATTCTTTTGTGAGCAATGGCCAATAATTTTGAATTATTGCC 11 12426973 0.986215474 5 10 86 0.916666667 0.740362689 0 0.090909091 0.166666667 11 0 1 11 2L:12426938-12426988 6 CG5446 FBtr0333094|FBtr0080388|FBtr0333093 12426629|12426898|12426898 12427225|12427225|12427225 TGTGAG 6mer2-7 dme-miR-1003-3p 2L - 12426949 12426982 3'utr CG5446 FlyBase G7925.1 AGTAATTCTTTTGTGAGCAATGGCCAATAATTTT 5 12426972 0.643184605 3 5 44 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2L:12426949-12426982 6 7.5 124 FBgn0032429 186 33.08333333 50.87 0.040322581 0.226700252 0.147434637 2 1 1.5 0.1 dme-miR-277-3p 6mer3-8 TGCATT 2L 12439867 12439872 + 2L_12439867_12439872_+ 0.988141733 0.987625731 0.987883732 0.000364867 Elf FBtr0333089|FBtr0080369|FBtr0344859|FBtr0333090 12439563|12439563|12439563|12439563 12441279|12440602|12440602|12440602 2L + 12439793 12439890 3'utr Elf FlyBase G4233.1 CGGAACGGAACGGCAATGTAGGCAGGCGAAAAGTTAATTTACAACAAGGACGAGTTCGGAGATAGAAACAGAAATGCATTATATACGAATTATAAACT 42 12439871 0.958182844 9 40 195 0.978723404 1.662757832 0.085106383 0.119047619 0.212765957 42 1 0 46 2L:12439793-12439890 6 Elf FBtr0344859|FBtr0333090|FBtr0333089|FBtr0080369 12439563|12439563|12439563|12439563 12440602|12440602|12441279|12440602 TGCATT 6mer3-8 dme-miR-277-3p 2L + 12439838 12439876 3'utr Elf FlyBase G3312.1 AAGGACGAGTTCGGAGATAGAAACAGAAATGCATTATAT 18 12439871 0.69487766 5 16 91 0.916666667 1.342422681 0 0.333333333 0.5 18 2 0 22 2L:12439838-12439876 6 24.5 125 FBgn0020443 5168.45 195.0133333 300.5566667 0.004740299 0.125632435 0.08151541 -4 -4 -4 0.1 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA 2L 12440009 12440016 + 2L_12440009_12440016_+ 0.626984256 0.626983631 0.626983944 4.95E-07 Elf FBtr0333089|FBtr0080369|FBtr0344859|FBtr0333090 12439563|12439563|12439563|12439563 12441279|12440602|12440602|12440602 2L + 12439984 12440026 3'utr Elf FlyBase G4234.1 TATATATGCAAAGAGAGAGAAAGAGTTGAAGAAGAGGAGTTGC 14 12440009 0.848260403 4 12 29 0.85 1.230448921 0.45 0.285714286 0.5 14 3 0 17 2L:12439984-12440026 8 Elf FBtr0344859|FBtr0333090|FBtr0333089|FBtr0080369 12439563|12439563|12439563|12439563 12440602|12440602|12441279|12440602 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p 2L + 12439981 12440027 3'utr Elf FlyBase G3313.1 ACGTATATATGCAAAGAGAGAGAAAGAGTTGAAGAAGAGGAGTTGCA 9 12440009 0.755924404 3 8 20 0.923076923 0.77815125 0.461538462 0.444444444 0.615384615 9 0 1 12 2L:12439981-12440027 8 10 126 FBgn0020443 5168.45 195.0133333 300.5566667 0.001934816 0.051278545 0.033271596 0 0 0 0.1 dme-miR-968-5p 7mer-A1 CTACTTA 2L 12440481 12440487 + 2L_12440481_12440487_+ 0.502828159 0.469053416 0.485940788 0.02388239 Elf FBtr0333089|FBtr0080369|FBtr0344859|FBtr0333090 12439563|12439563|12439563|12439563 12441279|12440602|12440602|12440602 2L + 12440460 12440491 3'utr Elf FlyBase G4236.1 ATTTAAAACCATTTGATTTTGCTACTTAAAAC 6 12440479 0.956390759 3 6 51 1 0.903089987 0 0.166666667 0.375 6 0 0 8 2L:12440460-12440491 7 Elf FBtr0344859|FBtr0333090|FBtr0333089|FBtr0080369 12439563|12439563|12439563|12439563 12440602|12440602|12441279|12440602 CTACTTA 7mer-A1 dme-miR-968-5p 2L + 12440464 12440498 3'utr Elf FlyBase G3315.1 AAAACCATTTGATTTTGCTACTTAAAACACATTTG 5 12440479 0.976572703 2 4 39 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 2L:12440464-12440498 7 5.5 127 FBgn0020443 5168.45 195.0133333 300.5566667 0.001064149 0.0282032 0.018299378 2 2 2 0.1 dme-miR-970-3p 8mer-A1 TCTTATGA 2L 12452005 12452012 - 2L_12452005_12452012_- 0.630790218 0.630790218 0.630790218 0 CG5418 FBtr0080382 12451943 12452060 2L - 12451966 12452021 3'utr CG5418 FlyBase G10276.1 TTTAATTGTTCTTATGATTTGTCTTGGCACATTGGATCGATCTTAAGTTTACGAAT 10 12452012 0.9944873 6 9 113 0.833333333 1 0.083333333 0.2 0.333333333 10 2 0 10 2L:12451966-12452021 8 CG5418 FBtr0080382 12451943 12452060 TCTTATGA 8mer-A1 dme-miR-970-3p 2L - 12451972 12452029 3'utr CG5418 FlyBase G7931.1 AGAATAACTTTAATTGTTCTTATGATTTGTCTTGGCACATTGGATCGATCTTAAGTTT 8 12452010 0.988322705 7 8 81 1 1 0.3 0.125 0.3 8 0 0 10 2L:12451972-12452029 8 5.5 128 FBgn0032436 3.666666667 0.376666667 0.583333333 1.5 14.60176991 9.428571429 0 -2 -1 0.1 dme-miR-12-5p 6mer2-7 ATACTC 2L 12455886 12455891 - 2L_12455886_12455891_- 0.99974807 0.999872804 0.999810437 8.82E-05 bun FBtr0339528|FBtr0300523|FBtr0299652 12455538|12455538|12455538 12457755|12457755|12457755 2L - 12455650 12455934 3'utr bun FlyBase G10281.2 GAAAATTATCATCCAAAATGAAAAGGGATTAAAACCAAATATGATACTCCAACTCCAAGTGCCGAAAACTAGCTGTCTACAGGGCAAACACCAATGGACAGACAAATCAGATAGACGGACGGACAGGACAGACTAATGTCACATCCCCCGAACACAGTAATTCTGTTGAAAAGTATTTCCCTTTATGATTTTTGTATTCAATTCAGAGAACCATCTTCATGCGTTTCATGTTTAGTTCTTCTCCTATGAGTTTTACGACTTAAGCCTCTTTTTAAGCTAACTATT 150 12455893 0.986153183 28 145 814 0.966850829 2.243038049 0.082872928 0.173333333 0.314917127 150 6 0 175 2L:12455650-12455934 6 bun FBtr0299652|FBtr0300523|FBtr0339528 12455538|12455538|12455538 12457755|12457755|12457755 ATACTC 6mer2-7 dme-miR-12-5p 2L - 12455845 12455994 3'utr bun FlyBase G7938.1 AGAACACAAAATGCAGCCTGCGGAGACGCAAATTGTCTAAGGCTAGCGTGGATTAAACAAGAAAATTATCATCCAAAATGAAAAGGGATTAAAACCAAATATGATACTCCAACTCCAAGTGCCGAAAACTAGCTGTCTACAGGGCAAACA 68 12455893 0.953924569 12 62 283 0.934065934 1.929418926 0.021978022 0.25 0.43956044 68 6 0 85 2L:12455845-12455994 6 65.5 129 FBgn0259176 10573.67 421.1233333 647.0833333 0.006194633 0.155536383 0.101223439 2 2 2 0.1 dme-miR-980-5p 7mer-m1 AAAAACT 2L 12456500 12456506 - 2L_12456500_12456506_- 0.765575467 0.76504956 0.765312513 0.000371867 bun FBtr0339528|FBtr0300523|FBtr0299652 12455538|12455538|12455538 12457755|12457755|12457755 2L - 12456494 12456538 3'utr bun FlyBase G10285.1 AGAAAGCTTATCAAAATTGTTTGTTAAACTCTAAAAACTATCTGC 5 12456517 0.987093955 4 5 39 1 0.698970004 0 0 0 5 0 0 5 2L:12456494-12456538 7 bun FBtr0299652|FBtr0300523|FBtr0339528 12455538|12455538|12455538 12457755|12457755|12457755 AAAAACT 7mer-m1 dme-miR-980-5p 2L - 12456445 12456538 3'utr bun FlyBase G7943.1 AGAAAGCTTATCAAAATTGTTTGTTAAACTCTAAAAACTATCTGCAAACAAAAAACCCAAAAATATCTGTAAATATTGTGTAAAACTAAAAACT 11 12456498 0.98448074 8 8 64 0.684210526 1.113943352 0 0.545454545 0.736842105 11 6 0 13 2L:12456445-12456538 7 3.5 130 FBgn0259176 10573.67 421.1233333 647.0833333 0.000331011 0.008311104 0.005408886 11 -8 1.5 0.1 dme-miR-988-3p 8mer-m1 ACAAGGGG 2L 12456705 12456712 - 2L_12456705_12456712_- 0.628234839 0.628234339 0.628234589 3.54E-07 bun FBtr0339528|FBtr0299658|FBtr0346622|FBtr0300523|FBtr0300522|FBtr0299652|FBtr0300524|FBtr0299656 12455538|12456575|12456575|12455538|12456575|12455538|12456575|12456575 12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755 2L - 12456644 12456738 3'utr bun FlyBase G10287.1 TTAATCCTAACTTTTATTGTAAAAATACAAGGGGAAATATTAACTACATCATAAATATGAATATGTTTCAAATTAAACAATGGATAACAAAAAAA 88 12456713 0.965473444 13 80 418 0.95412844 2.017033339 0.027522936 0.215909091 0.366972477 88 5 0 104 2L:12456644-12456738 8 bun FBtr0300524|FBtr0299656|FBtr0300522|FBtr0299652|FBtr0346622|FBtr0300523|FBtr0339528|FBtr0299658 12456575|12456575|12456575|12455538|12456575|12455538|12455538|12456575 12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755 ACAAGGGG 8mer-m1 dme-miR-988-3p 2L - 12456647 12456735 3'utr bun FlyBase G7945.1 ATCCTAACTTTTATTGTAAAAATACAAGGGGAAATATTAACTACATCATAAATATGAATATGTTTCAAATTAAACAATGGATAACAAAA 59 12456713 0.973930095 10 53 322 0.916666667 1.58546073 0.05952381 0.355932203 0.547619048 59 6 1 77 2L:12456647-12456735 8 67 131 FBgn0259176 10573.67 421.1233333 647.0833333 0.006336494 0.159098285 0.103541533 1 1 1 0.1 dme-miR-14-3p 6mer2-7 AGACTG 2L 12457318 12457323 - 2L_12457318_12457323_- 0.99980331 0.999802984 0.999803147 2.12E-07 bun FBtr0339528|FBtr0299658|FBtr0299657|FBtr0346622|FBtr0300523|FBtr0300521|FBtr0300522|FBtr0299652|FBtr0300524|FBtr0299656 12455538|12456575|12457136|12456575|12455538|12456885|12456575|12455538|12456575|12456575 12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755 2L - 12457211 12457561 5'utr bun FlyBase G10290.1 AGCAATAGCAGCGCAGCGGCAGGCAGACTCACCCAAACATGTTAAGTTCGTGTTAGGTAGACTAGCCTGCTGTTAAGAATTGTTATGTTGTTGCTGGCTGTTAATCTGCTGCAGCCGCCGTTTTGTTAATTTCTCGATTGTGATATTTGTTTAACACACATACAGACCACCACACACACACACACTCATACGCATTTACACACACATCCATACGAAATACACACACAAACACACAGATAGACTGCACGCTAACAGCGGCTGCGGCTGGCGCTGTTAACGTCCGCTGTTAACTCGAAGCGAGTATAGGAGTTCTTTTAAATATCGCGCTGCTGCGCCTCCACATTTTTGTTT 3062 12457324 0.994606079 68 2920 18402 0.95735901 1.77815125 0.049793673 0.153494448 0.2869326 3062 98 57 3480 2L:12457211-12457561 6 bun FBtr0300524|FBtr0299656|FBtr0300522|FBtr0299652|FBtr0299657|FBtr0346622|FBtr0300523|FBtr0300521|FBtr0339528|FBtr0299658 12456575|12456575|12456575|12455538|12457136|12456575|12455538|12456885|12455538|12456575 12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755 AGACTG 6mer2-7 dme-miR-14-3p 2L - 12457257 12457395 5'utr bun FlyBase G7948.1 CCACCACACACACACACACTCATACGCATTTACACACACATCCATACGAAATACACACACAAACACACAGATAGACTGCACGCTAACAGCGGCTGCGGCTGGCGCTGTTAACGTCCGCTGTTAACTCGAAGCGAGTATA 965 12457324 0.98266962 17 922 2062 0.965362412 2.098355254 0.030788967 0.421761658 0.642078255 965 43 11 1505 2L:12457257-12457395 6 1273.5 132 FBgn0259176 10573.67 421.1233333 647.0833333 0.12044068 3.024054711 1.968061816 1 1 1 0.1 dme-miR-999-3p 6mer2-7 GTTAAC 2L 12457642 12457647 - 2L_12457642_12457647_- 0.600871579 0.972752314 0.786811947 0.262959365 bun FBtr0339528|FBtr0299658|FBtr0299657|FBtr0346622|FBtr0300523|FBtr0300521|FBtr0300522|FBtr0299652|FBtr0300524|FBtr0299656 12455538|12456575|12457136|12456575|12455538|12456885|12456575|12455538|12456575|12456575 12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755 2L - 12457620 12457996 stop_codon bun FlyBase G10291.1 TGCTCCAGCTGCCGCGGGTCAGGCAGTTCAGCAGCAGGCCGCTGGAGCGGTAGCGGTAACGGGTGTGGCCACCAGTCCAGCGTCCGCGGTGGTACCCACGAGCATTCCCAACGGCAGCGCCGAGAACGGCAGCAGTGCAGTCGAGTCAGCAGCGGTATCGGTGGAGCAGCAGGTGCAGCAGGTGACATCAGCAGCGGCAGCAGCAGCATCGGTAGTCACAGCCAATGGTCCCATGTCCTAAACAGTTGCTGCTGTGGCCCGAACACACAGTGTTTGTTTTTTTTAAGGCGCCCACGCACCGTGGTGTGTGTGGGGGGAAATGAACGTTTTTAAGAATGAAAACCGTAATGTTAACTCAGCCGCAGTCTCTTTCTTAG 216 12457666 0.963967427 46 197 1025 0.924 1.761551989 0.244 0.143518519 0.26 216 16 3 231 2L:12457620-12457996 6 bun FBtr0300524|FBtr0299656|FBtr0300522|FBtr0299652|FBtr0299657|FBtr0346622|FBtr0300523|FBtr0300521|FBtr0339528|FBtr0299658 12456575|12456575|12456575|12455538|12457136|12456575|12455538|12456885|12455538|12456575 12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755 GTTAAC 6mer2-7 dme-miR-999-3p 2L - 12457627 12457718 5'utr bun FlyBase G7951.1 TTTTTTAAGGCGCCCACGCACCGTGGTGTGTGTGGGGGGAAATGAACGTTTTTAAGAATGAAAACCGTAATGTTAACTCAGCCGCAGTCTCT 67 12457666 0.975158716 12 59 375 0.886597938 1.457377197 0.257731959 0.313432836 0.525773196 67 9 2 86 2L:12457627-12457718 6 36.5 133 FBgn0259176 10573.67 421.1233333 647.0833333 0.003451971 0.086672946 0.056406954 19 19 19 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 12708635 12708640 + 2L_12708635_12708640_+ 0.999999947 1 0.999999973 7.07E-08 CG6180 FBtr0080398|FBtr0080398|FBtr0080398 12708543|12708543|12708543 12708680|12708680|12708680 2L + 12708558 12708658 3'utr CG6180 FlyBase G4258.1 AACCATGCTTATATAAGCCAGTCTGAATTGGATTCAAATCTATTGTAACCTAGAAATTAAAGACACCTATGAACACTCTGTGAAACCCTCTGTTGCTGGCA 130 12708634 0.763928041 15 117 729 0.896774194 1.540954809 0.24516129 0.184615385 0.316129032 130 13 3 139 2L:12708558-12708658 6 CG6180 FBtr0080398|FBtr0080398|FBtr0080398 12708543|12708543|12708543 12708680|12708680|12708680 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 12708550 12708662 3'utr CG6180 FlyBase G3331.1 ACGCCAAAAACCATGCTTATATAAGCCAGTCTGAATTGGATTCAAATCTATTGTAACCTAGAAATTAAAGACACCTATGAACACTCTGTGAAACCCTCTGTTGCTGGCAATAA 62 12708633 0.961440018 17 59 339 0.955555556 1.633468456 0.144444444 0.274193548 0.5 62 3 1 86 2L:12708550-12708662 6 69 134 FBgn0032453 1365.473333 166.0266667 253.2533333 0.050531928 0.415595888 0.272454459 1 2 1.5 0.1 dme-miR-999-3p 6mer2-7 GTTAAC 2L 12744183 12744188 + 2L_12744183_12744188_+ 1 0.504027376 0.752013688 0.350705589 MRP FBtr0090014|FBtr0090013|FBtr0090027|FBtr0090022|FBtr0090024|FBtr0090028|FBtr0090017|FBtr0090026|FBtr0090020|FBtr0090016|FBtr0090021|FBtr0090029|FBtr0090015|FBtr0090023|FBtr0090025|FBtr0090019|FBtr0090018 12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170 12744806|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807 2L + 12744160 12744201 stop_codon MRP FlyBase G4268.1 AATCTAGTTTAAGATCCATGAATGTTAACTTGAAACTCCACG 5 12744182 0.975687607 3 5 35 1 0.84509804 0.142857143 0.2 0.428571429 5 0 0 7 2L:12744160-12744201 6 MRP FBtr0090015|FBtr0090023|FBtr0090026|FBtr0090019|FBtr0090018|FBtr0090016|FBtr0090020|FBtr0090029|FBtr0090021|FBtr0090025|FBtr0090014|FBtr0090028|FBtr0090027|FBtr0090017|FBtr0090024|FBtr0090013|FBtr0090022 12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170 12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744806|12744807|12744807|12744807|12744807|12744807|12744807 GTTAAC 6mer2-7 dme-miR-999-3p 2L + 12744153 12744236 stop_codon MRP FlyBase G3338.1 GGACGCCAATCTAGTTTAAGATCCATGAATGTTAACTTGAAACTCCACGAAACTCAAACGGAAGAGTGAGTGCCCCAAAACAAC 14 12744189 0.992493655 6 13 47 1 1.301029996 0 0.214285714 0.45 14 0 0 20 2L:12744153-12744236 6 5.5 135 FBgn0032456 4513.983333 98.30333333 150.4066667 0.001218436 0.055949273 0.036567528 1 -6 -2.5 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 12744636 12744643 + 2L_12744636_12744643_+ 0.500120024 0.500116166 0.500118095 2.69E-06 MRP FBtr0090014|FBtr0090013|FBtr0090027|FBtr0090022|FBtr0090024|FBtr0090028|FBtr0090017|FBtr0090026|FBtr0090020|FBtr0090016|FBtr0090021|FBtr0090029|FBtr0090015|FBtr0090023|FBtr0090025|FBtr0090019|FBtr0090018 12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170 12744806|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807 2L + 12744614 12744771 3'utr MRP FlyBase G4271.1 CTTATGTATGCCACATATTTATGTACTTAAATTAACAAATCAGAAGATTGAGATACTACTTAAACTCCCTCAAGAATTTTTGCCTTCAACTGATAAGATCAGTACGAAAAACGGTCAATGTAGTTAAATCAATTTATTGAAACTTTTGTAGATTGTAT 56 12744635 0.854623124 15 52 464 0.935483871 1.462397998 0.064516129 0.107142857 0.193548387 56 3 1 58 2L:12744614-12744771 8 MRP FBtr0090015|FBtr0090023|FBtr0090026|FBtr0090019|FBtr0090018|FBtr0090016|FBtr0090020|FBtr0090029|FBtr0090021|FBtr0090025|FBtr0090014|FBtr0090028|FBtr0090027|FBtr0090017|FBtr0090024|FBtr0090013|FBtr0090022 12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170 12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744806|12744807|12744807|12744807|12744807|12744807|12744807 GTACTTAA 8mer-A1 dme-miR-252-5p 2L + 12744620 12744653 3'utr MRP FlyBase G3341.1 TATGCCACATATTTATGTACTTAAATTAACAAAT 13 12744634 0.690525964 3 12 122 0.888888889 1.204119983 0 0.307692308 0.5 13 2 0 16 2L:12744620-12744653 8 22 136 FBgn0032456 4513.983333 98.30333333 150.4066667 0.004873744 0.223797091 0.146270112 1 2 1.5 0.1 dme-miR-33-5p 6mer2-7 AATGCA 2L 12817079 12817084 - 2L_12817079_12817084_- 1 1 1 0 kek1 FBtr0332210 12816998 12819017 2L - 12817051 12817098 3'utr kek1 FlyBase G10356.1 AAAGGCGGGCATTGAATGCATGAAAGCAACTGAATGAACAACAAAGCA 7 12817085 0.914460605 5 6 20 0.857142857 0.77815125 0 0 0 7 1 0 6 2L:12817051-12817098 6 kek1 FBtr0332210 12816998 12819017 AATGCA 6mer2-7 dme-miR-33-5p 2L - 12817052 12817097 3'utr kek1 FlyBase G8009.1 AAGGCGGGCATTGAATGCATGAAAGCAACTGAATGAACAACAAAGC 6 12817085 0.882899209 3 5 14 0.857142857 0.77815125 0.285714286 0.166666667 0.285714286 6 1 0 6 2L:12817052-12817097 6 4.5 137 FBgn0015399 5185.06 109.4633333 168.6866667 0.000867878 0.041109656 0.026676679 1 1 1 0.1 dme-miR-277-3p 7mer-A1 GCATTTA 2L 12817260 12817266 - 2L_12817260_12817266_- 0.823348046 0.823113571 0.823230809 0.000165746 kek1 FBtr0332210 12816998 12819017 2L - 12817247 12817290 3'utr kek1 FlyBase G10358.1 AAAAAAGAGCAAGAAAAAACCGTAGCATTTAAGTTGAACTTATG 6 12817268 0.962192479 3 5 24 0.833333333 0.698970004 0.166666667 0 0 6 1 0 5 2L:12817247-12817290 7 kek1 FBtr0332210 12816998 12819017 GCATTTA 7mer-A1 dme-miR-277-3p 2L - 12817233 12817286 3'utr kek1 FlyBase G8011.1 AAGAGCAAGAAAAAACCGTAGCATTTAAGTTGAACTTATGTATTATGTATTGTA 7 12817265 0.986867539 5 6 56 0.875 0.84509804 0.125 0.142857143 0.25 7 1 0 7 2L:12817233-12817286 7 6 138 FBgn0015399 5185.06 109.4633333 168.6866667 0.001157171 0.054812875 0.035568905 2 -1 0.5 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2L 12817405 12817410 - 2L_12817405_12817410_- 0.747596568 0.630702255 0.689149411 0.082656752 kek1 FBtr0332210 12816998 12819017 2L - 12817374 12817433 3'utr kek1 FlyBase G10359.1 AATAATATTTTTAAGGTAAACCAAAGACTTTTTTCTTTGCATCTAAATGAGCGCAGGAGT 76 12817403 0.911117367 11 72 541 0.956989247 1.949390007 0.096774194 0.197368421 0.344086022 76 4 0 89 2L:12817374-12817433 6 kek1 FBtr0332210 12816998 12819017 AAGACT 6mer3-8 dme-miR-14-3p 2L - 12817383 12817432 3'utr kek1 FlyBase G8012.1 ATAATATTTTTAAGGTAAACCAAAGACTTTTTTCTTTGCATCTAAATGAG 44 12817403 0.622138027 5 43 320 0.982758621 1.45484486 0.189655172 0.272727273 0.448275862 44 0 1 57 2L:12817383-12817432 6 58.5 139 FBgn0015399 5185.06 109.4633333 168.6866667 0.011282415 0.534425531 0.346796823 -7 -7 -7 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 12818801 12818807 - 2L_12818801_12818807_- 0.80196692 0.801969012 0.801967966 1.48E-06 kek1 FBtr0332210|FBtr0332210|FBtr0332210 12816998|12816998|12816998 12819017|12819017|12819017 2L - 12818785 12818864 3'utr kek1 FlyBase G10362.1 CTGATAGATAGCTCCGGGGTCCTAGGCGAGCAGCGATTATTGTGCAAGCGAACTGTTTGTGATAGTGTCTGACAAAAAGA 53 12818809 0.96985266 9 49 356 0.972972973 1.380211242 0.216216216 0.301886792 0.5 53 0 2 72 2L:12818785-12818864 7 kek1 FBtr0332210|FBtr0332210|FBtr0332210 12816998|12816998|12816998 12819017|12819017|12819017 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 12818743 12818843 3'utr kek1 FlyBase G8013.1 CTAGGCGAGCAGCGATTATTGTGCAAGCGAACTGTTTGTGATAGTGTCTGACAAAAAGATAATGCGAATGAAGATAATAATTGCCCAAAGCAAAGAGAAAG 25 12818809 0.97937753 8 21 153 0.928571429 1.591064607 0.095238095 0.48 0.69047619 25 3 0 39 2L:12818743-12818843 7 32.5 140 FBgn0015399 5185.06 109.4633333 168.6866667 0.006268008 0.296903073 0.192664901 2 2 2 0.1 dme-miR-1012-3p 7mer-A1 TGACTAA 2L 12818962 12818968 - 2L_12818962_12818968_- 0.823301274 0.823348689 0.823324982 3.35E-05 kek1 FBtr0332210 12816998 12819017 2L - 12818935 12819074 stop_codon kek1 FlyBase G10363.1 AGCAGCCGGAATTCGCCGGACGAGGGATACCAGGAAGGATGCGGCACGGATGTGTAAGCGCAGCGCTTCTCGGCGGAAGGAACGGCGAGGAAACCAAACCAAGAACTGACTAAACTTAACACAACTAAACAAGAGATATA 50 12818964 0.870300491 9 48 124 0.967741935 1.477121255 0.096774194 0.18 0.338709677 50 1 1 60 2L:12818935-12819074 7 kek1 FBtr0332210 12816998 12819017 TGACTAA 7mer-A1 dme-miR-1012-3p 2L - 12818939 12819089 stop_codon kek1 FlyBase G8014.1 AGGGCCCTGATCAGCAGCAGCCGGAATTCGCCGGACGAGGGATACCAGGAAGGATGCGGCACGGATGTGTAAGCGCAGCGCTTCTCGGCGGAAGGAACGGCGAGGAAACCAAACCAAGAACTGACTAAACTTAACACAACTAAACAAGAGA 46 12818963 0.858609974 13 44 108 0.942028986 1.210853365 0.173913043 0.391304348 0.594202899 46 1 3 65 2L:12818939-12819089 7 36 141 FBgn0015399 5185.06 109.4633333 168.6866667 0.006943025 0.32887725 0.213413429 -4 -5 -4.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 13001290 13001297 - 2L_13001290_13001297_- 0.63113665 0.631136649 0.631136649 0 Vha68-1 FBtr0080429|FBtr0336618 13000768|13000963 13001411|13001411 2L - 13001280 13001347 3'utr Vha68-1 FlyBase G10383.1 AAACGAAATAAGAAACCAAAGCTAGGTTATTATTCGAATTCCCCATTCAATCTAGTCATATTTACATA 15 13001299 0.990715221 5 13 131 0.866666667 0.812913357 0.133333333 0 0 15 1 1 13 2L:13001280-13001347 8 Vha68-1 FBtr0336618|FBtr0080429 13000963|13000768 13001411|13001411 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 13001260 13001312 3'utr Vha68-1 FlyBase G8028.1 GAATTCCCCATTCAATCTAGTCATATTTACATAATGCATAATAAGATATTTGA 9 13001298 0.993367954 5 7 83 0.75 0.653212514 0.083333333 0.333333333 0.5 9 2 1 9 2L:13001260-13001312 8 10.5 142 FBgn0265262 180.4566667 8.25 12.47 0.058185714 1.272727273 0.84202085 2 1 1.5 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 2L 13012973 13012978 + 2L_13012973_13012978_+ 0.744486705 0.99754623 0.871016467 0.178940088 Tor FBtr0080422|FBtr0336615 13012931|13012931 13013197|13013197 2L + 13012918 13013002 stop_codon Tor FlyBase G4303.1 TGTCCGTTTTGGTAGGTCAACCGATCCGGCATAGATCCCGTGCGACAACCGGCAATTGACTGAGCGAGATTACGAACTTACGATT 17 13012973 0.890689766 6 17 58 1 1.255272505 0.388888889 0.058823529 0.111111111 17 0 0 18 2L:13012918-13013002 6 Tor FBtr0080422|FBtr0336615 13012931|13012931 13013197|13013197 TTGACT 6mer3-8 dme-miR-1012-3p 2L + 13012953 13013005 3'utr Tor FlyBase G3361.1 TCCCGTGCGACAACCGGCAATTGACTGAGCGAGATTACGAACTTACGATTACT 14 13012973 0.740099263 4 12 48 0.882352941 0.875061263 0.470588235 0.142857143 0.294117647 14 1 1 15 2L:13012953-13013005 6 12.5 143 FBgn0021796 1145.65 17.29333333 26.52 0.010910837 0.722821897 0.471342383 0 0 0 0.1 dme-miR-252-5p 7mer-m1 TACTTAG 2L 13013580 13013586 - 2L_13013580_13013586_- 0.702936346 0.414806412 0.558871379 0.203738606 CG9934 FBtr0080428|FBtr0301247 13013274|13013386 13013614|13013614 2L - 13013544 13013606 3'utr CG9934 FlyBase G10387.1 CCCTTTAACCCATACTGCTATACTTAGGACTAGTTTAATGTGCAGTTTTAGTGTCTACCTATC 11 13013583 0.98895868 8 10 92 0.928571429 1.113943352 0.071428571 0.181818182 0.357142857 11 1 0 13 2L:13013544-13013606 7 CG9934 FBtr0080428 13013274 13013614 TACTTAG 7mer-m1 dme-miR-252-5p 2L - 13013541 13013605 3'utr CG9934 FlyBase G8030.1 CCTTTAACCCATACTGCTATACTTAGGACTAGTTTAATGTGCAGTTTTAGTGTCTACCTATCTTC 7 13013594 0.989740106 5 6 61 0.923076923 1.079181246 0 0.571428571 0.769230769 7 1 0 12 2L:13013541-13013605 7 6.5 144 FBgn0032467 964.9333333 25.60666667 39.19333333 0.006736217 0.253840146 0.165844531 -3 8 2.5 0.1 dme-miR-33-5p 7mer-A1 AATGCAA 2L 13022236 13022242 - 2L_13022236_13022242_- 0.782758757 0.782819986 0.782789372 4.33E-05 CG9932 FBtr0310277|FBtr0336617 13021866|13021866 13023322|13023322 2L - 13022194 13022421 3'utr CG9932 FlyBase G10413.1 TTAGTTTCTACTACGGATTAGTTATGTTCTCATCATTAGTGCGAATGTTTTCCAGCAAACGGCGTCTTTGTAGCACAGTGTAGGCGTTAACACTACAAACAAAATGTTATCATTAAACTATAAGCAAACAAAAAGAACACATGTGGAATAGCGGGGCCATATTTAAATAGTTTAAACTTAATGCAAGGAAACATTTGAAAACAAAGCAAATCAAAACCAGAAGATATA 81 13022240 0.974564496 24 79 486 0.966292135 1.934498451 0.056179775 0.098765432 0.179775281 81 3 0 86 2L:13022194-13022421 7 CG9932 FBtr0336617|FBtr0310277 13021866|13021866 13023322|13023322 AATGCAA 7mer-A1 dme-miR-33-5p 2L - 13022224 13022292 3'utr CG9932 FlyBase G8052.1 AAAAAGAACACATGTGGAATAGCGGGGCCATATTTAAATAGTTTAAACTTAATGCAAGGAAACATTTGA 43 13022240 0.962165106 6 41 209 0.966666667 1.763427994 0.016666667 0.255813953 0.466666667 43 2 0 58 2L:13022224-13022292 7 43.5 145 FBgn0262160 822.2633333 11.45 17.61 0.05290276 3.799126638 2.470187394 -2 -2 -2 0.1 dme-miR-92b-3p 6mer2-7 TGCAAT 2L 13022627 13022632 - 2L_13022627_13022632_- 1 1 1 0 CG9932 FBtr0310277|FBtr0336617 13021866|13021866 13023322|13023322 2L - 13022604 13022654 3'utr CG9932 FlyBase G10414.1 AAGAAAGTGAGCGCGTATATCATGCAATGAATATGGTACTATATACATACT 24 13022636 0.66228318 6 23 124 0.965517241 1.447158031 0.344827586 0.166666667 0.310344828 24 1 0 28 2L:13022604-13022654 6 CG9932 FBtr0336617|FBtr0310277 13021866|13021866 13023322|13023322 TGCAAT 6mer2-7 dme-miR-92b-3p 2L - 13022601 13022652 3'utr CG9932 FlyBase G8054.1 GAAAGTGAGCGCGTATATCATGCAATGAATATGGTACTATATACATACTATA 19 13022635 0.979678543 6 15 106 0.740740741 1.301029996 0.481481481 0.315789474 0.518518519 19 7 0 20 2L:13022601-13022652 6 20.5 146 FBgn0262160 822.2633333 11.45 17.61 0.024931186 1.790393013 1.1641113 4 3 3.5 0.1 dme-miR-277-3p 6mer2-7 GCATTT 2L 13022876 13022881 - 2L_13022876_13022881_- 0.979274483 0.851134673 0.915204578 0.090608522 CG9932 FBtr0310277|FBtr0336616|FBtr0089956|FBtr0336617 13021866|13022669|13022669|13021866 13023322|13023322|13023322|13023322 2L - 13022865 13022997 3'utr CG9932 FlyBase G10417.1 CGAATACTTTGCAAATGGGATAAGCCGGAATTCTTAATGTAATTACTTGCTAGAACGGTGCAAAATGTAATTTAAACTAATCGTATTGTAACTTATCAAAGAGATAACTATAGAAGGCATTTTAATATAGAAC 32 13022876 0.967776255 15 29 202 0.891891892 1.041392685 0.108108108 0.15625 0.27027027 32 2 2 33 2L:13022865-13022997 6 CG9932 FBtr0089956|FBtr0336617|FBtr0310277|FBtr0336616 13022669|13021866|13021866|13022669 13023322|13023322|13023322|13023322 GCATTT 6mer2-7 dme-miR-277-3p 2L - 13022865 13022949 3'utr CG9932 FlyBase G8057.1 GCTAGAACGGTGCAAAATGTAATTTAAACTAATCGTATTGTAACTTATCAAAGAGATAACTATAGAAGGCATTTTAATATAGAAC 13 13022877 0.967949889 7 13 76 1 1.230448921 0.294117647 0.307692308 0.470588235 13 0 0 17 2L:13022865-13022949 6 7 147 FBgn0262160 822.2633333 11.45 17.61 0.008513088 0.611353712 0.39750142 -5 -4 -4.5 0.1 dme-miR-276a-3p 6mer2-7 GTTCCT 2L 13023079 13023084 - 2L_13023079_13023084_- 0.999968665 0.999979223 0.999973944 7.42E-06 CG9932 FBtr0310277|FBtr0336616|FBtr0089956|FBtr0336617 13021866|13022669|13022669|13021866 13023322|13023322|13023322|13023322 2L - 13023048 13023102 3'utr CG9932 FlyBase G10418.1 CACACCTAGTTGGAACATGTTCCTGCACTTTTACGTTTTTTCTAGAACCTAAGGT 21 13023085 0.975201836 5 19 162 0.916666667 1.342422681 0.125 0.142857143 0.25 21 2 0 22 2L:13023048-13023102 6 CG9932 FBtr0089956|FBtr0336617|FBtr0310277|FBtr0336616 13022669|13021866|13021866|13022669 13023322|13023322|13023322|13023322 GTTCCT 6mer2-7 dme-miR-276a-3p 2L - 13023048 13023104 3'utr CG9932 FlyBase G8058.1 TACACACCTAGTTGGAACATGTTCCTGCACTTTTACGTTTTTTCTAGAACCTAAGGT 8 13023085 0.979996243 3 7 64 0.916666667 1.041392685 0 0.375 0.583333333 8 1 0 11 2L:13023048-13023104 6 13.5 148 FBgn0262160 822.2633333 11.45 17.61 0.016418098 1.179039301 0.766609881 1 1 1 0.1 dme-miR-282-5p 6mer2-7 GAGGCT 2L 13168888 13168893 + 2L_13168888_13168893_+ 0.992700122 0.973099933 0.982900028 0.013859434 Sir2 FBtr0080434 13168640 13169551 2L + 13168864 13168964 3'utr Sir2 FlyBase G4323.1 CGGATCCACTAGTTTACTCAATTCGAGGCTTTAGAGATCTGACCCTCGTTGCTTTACCACCAACCCCTTATGCCCAATCCCGTTTTGATATTTTTGAAAAA 49 13168894 0.981189427 15 47 343 0.95 1.45484486 0.216666667 0.224489796 0.366666667 49 2 1 57 2L:13168864-13168964 6 Sir2 FBtr0080434 13168640 13169551 GAGGCT 6mer2-7 dme-miR-282-5p 2L + 13168843 13168956 3'utr Sir2 FlyBase G3368.1 GAAGTTTTCAAGAAATGAAACCGGATCCACTAGTTTACTCAATTCGAGGCTTTAGAGATCTGACCCTCGTTGCTTTACCACCAACCCCTTATGCCCAATCCCGTTTTGATATTT 35 13168894 0.974111332 15 35 214 1 1.672097858 0.340425532 0.257142857 0.446808511 35 0 0 47 2L:13168843-13168956 6 29.5 149 FBgn0024291 729.5333333 23.15666667 35.49 0.040436809 1.273931193 0.831220062 -6 -6 -6 0.1 dme-miR-33-5p 7mer-A1 AATGCAA 2L 13169181 13169187 + 2L_13169181_13169187_+ 0.782590551 0.782908793 0.782749672 0.000225001 Sir2 FBtr0080434 13168640 13169551 2L + 13169160 13169277 3'utr Sir2 FlyBase G4325.1 TAACATATTCAAAACTATGCAAATGCAAACGGAAAAATACGTTAGTTTTAGTTAAAAACTAGACACAAACACTCTGTATATAAGCACTCGCCCCTAATTTGTATTGTACATGATTCTT 16 13169177 0.979437784 10 16 112 1 1.255272505 0.333333333 0.125 0.222222222 16 0 0 18 2L:13169160-13169277 7 Sir2 FBtr0080434 13168640 13169551 AATGCAA 7mer-A1 dme-miR-33-5p 2L + 13169143 13169211 3'utr Sir2 FlyBase G3371.1 AAATCTAGTTCTAAGCGTAACATATTCAAAACTATGCAAATGCAAACGGAAAAATACGTTAGTTTTAGT 12 13169177 0.931831143 5 12 51 1 1.278753601 0.473684211 0.5 0.684210526 12 0 0 19 2L:13169143-13169211 7 9 150 FBgn0024291 729.5333333 23.15666667 35.49 0.012336654 0.388656974 0.253592561 4 4 4 0.1 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA 2L 13169746 13169753 - 2L_13169746_13169753_- 0.627007348 0.589453127 0.608230238 0.026554829 Sfmbt FBtr0080491|FBtr0333236|FBtr0289981|FBtr0080492 13169647|13169647|13169647|13169647 13170451|13170451|13170451|13170451 2L - 13169728 13169806 3'utr Sfmbt FlyBase G10449.1 TTCCGGTGTCACACATCTCTGCAAGGAGGGCATTATTGGTGTAAGGCAAACTTTTGAAGAAGGCAACCTTAATGATAAA 24 13169754 0.852733185 6 24 116 1 1.491361694 0.193548387 0.25 0.419354839 24 0 0 31 2L:13169728-13169806 8 Sfmbt FBtr0080492|FBtr0289981|FBtr0333236|FBtr0080491 13169647|13169647|13169647|13169647 13170451|13170451|13170451|13170451 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p 2L - 13169728 13169809 3'utr Sfmbt FlyBase G8077.1 TCGTTCCGGTGTCACACATCTCTGCAAGGAGGGCATTATTGGTGTAAGGCAAACTTTTGAAGAAGGCAACCTTAATGATAAA 27 13169754 0.911199588 6 25 146 0.973684211 1.568201724 0.236842105 0.333333333 0.526315789 27 1 0 37 2L:13169728-13169809 8 10 151 FBgn0032475 1744.74 46.46666667 71.1 0.005731513 0.215208034 0.140646976 1 1 1 0.1 dme-miR-980-3p 6mer3-8 GGCAGC 2L 13169905 13169910 - 2L_13169905_13169910_- 0.956100858 0.924192243 0.94014655 0.022562858 Sfmbt FBtr0080491|FBtr0333236|FBtr0289981|FBtr0080492 13169647|13169647|13169647|13169647 13170451|13170451|13170451|13170451 2L - 13169873 13169929 3'utr Sfmbt FlyBase G10450.1 AGCGCAAGCAAATAACCCAGGCAGCATGCCCTCAACTTTCAGTCGTAAACGGAGCGA 23 13169903 0.898305652 4 23 65 1 1.447158031 0.035714286 0.217391304 0.357142857 23 0 0 28 2L:13169873-13169929 6 Sfmbt FBtr0080492|FBtr0289981|FBtr0333236|FBtr0080491 13169647|13169647|13169647|13169647 13170451|13170451|13170451|13170451 GGCAGC 6mer3-8 dme-miR-980-3p 2L - 13169869 13169945 3'utr Sfmbt FlyBase G8078.1 ATTTTATATAGAAGCAAGCGCAAGCAAATAACCCAGGCAGCATGCCCTCAACTTTCAGTCGTAAACGGAGCGATTGG 14 13169903 0.982518449 4 14 46 1 1.278753601 0.105263158 0.357142857 0.526315789 14 0 0 19 2L:13169869-13169945 6 15 152 FBgn0032475 1744.74 46.46666667 71.1 0.00859727 0.322812052 0.210970464 -7 -7 -7 0.1 dme-miR-283-5p 8mer-A1 TGATATTA 2L 13178947 13178954 + 2L_13178947_13178954_+ 0.592190765 0.592188542 0.592189654 1.63E-06 CG5439 FBtr0080435 13178812 13178978 2L + 13178876 13178970 3'utr CG5439 FlyBase G4333.1 TTTATCTATTTCGTTGTAGATATCTTTATCTATATGTGTAATAACGGAGTTGGTCCAAGTGTTGTAATCATTGATATTAAATAAAGTTAAGCCTT 51 13178946 0.986672498 8 51 490 1 1.740362689 0.090909091 0.058823529 0.127272727 51 0 0 55 2L:13178876-13178970 8 CG5439 FBtr0080435 13178812 13178978 TGATATTA 8mer-A1 dme-miR-283-5p 2L + 13178901 13178969 3'utr CG5439 FlyBase G3378.1 TTATCTATATGTGTAATAACGGAGTTGGTCCAAGTGTTGTAATCATTGATATTAAATAAAGTTAAGCCT 33 13178946 0.989590839 5 32 311 0.980769231 1.707570176 0.019230769 0.424242424 0.634615385 33 1 0 51 2L:13178901-13178969 8 37.5 153 FBgn0032476 436.6666667 29.4 45.33 0.085877863 1.275510204 0.827266711 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 13180752 13180759 - 2L_13180752_13180759_- 0.601093279 0.604090184 0.602591732 0.002119128 CG31849 FBtr0080490|FBtr0080490|FBtr0080490 13180396|13180396|13180396 13180988|13180988|13180988 2L - 13180720 13180786 3'utr CG31849 FlyBase G10472.1 AGCAGACAGGACAGACAGACCCGCCATCTGTGATAAGAAAAACCAGAACTAAACAATGAATTTATGA 48 13180760 0.95162593 4 46 143 0.947368421 1.73239376 0.157894737 0.145833333 0.280701754 48 3 0 54 2L:13180720-13180786 8 CG31849 FBtr0080490|FBtr0080490|FBtr0080490 13180396|13180396|13180396 13180988|13180988|13180988 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 13180746 13180783 3'utr CG31849 FlyBase G8088.1 AGACAGGACAGACAGACCCGCCATCTGTGATAAGAAAA 32 13180760 0.959104993 2 32 96 1 1.602059991 0.175 0.21875 0.375 32 0 0 40 2L:13180746-13180783 8 39 154 FBgn0051849 77.33333333 4.373333333 6.81 0.504310345 8.917682927 5.726872247 1 1 1 0.1 dme-bantam-3p 7mer-m8 TGATCTC 2L 13183895 13183901 - 2L_13183895_13183901_- 0.661614102 0.661615243 0.661614672 7.78E-07 CG16974 FBtr0305555 13183847 13185416 2L - 13183856 13183930 3'utr CG16974 FlyBase G10475.1 GGCGACCCTTCCTGTAGTTCCCATCATACTGATCTCCGTTGGGCAGGATGGCCCAACCTCTACCTTGTCTCTGTC 32 13183901 0.999830633 7 30 220 0.973684211 1.267171728 0.078947368 0.15625 0.289473684 32 0 1 37 2L:13183856-13183930 7 CG16974 FBtr0305555 13183847 13185416 TGATCTC 7mer-m8 dme-bantam-3p 2L - 13183858 13183916 3'utr CG16974 FlyBase G8089.1 TAGTTCCCATCATACTGATCTCCGTTGGGCAGGATGGCCCAACCTCTACCTTGTCTCTG 20 13183901 0.985176194 7 18 147 0.857142857 1.380211242 0.178571429 0.3 0.5 20 4 0 24 2L:13183858-13183916 7 24 155 FBgn0032479 2807.686667 76.92 117.31 0.008547962 0.31201248 0.204586139 0 0 0 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 2L 13185071 13185077 - 2L_13185071_13185077_- 0.521223567 0.521037087 0.521130327 0.000131875 CG16974 FBtr0305555|FBtr0080489 13183847|13184945 13185416|13185416 2L - 13185059 13185097 3'utr CG16974 FlyBase G10477.1 TGAAAAGAGAGCCCCCCATTTGTGATTTCATTACTTAAC 15 13185078 0.981420804 4 15 110 1 1.361727836 0.304347826 0.333333333 0.565217391 15 0 0 23 2L:13185059-13185097 7 CG16974 FBtr0080489|FBtr0305555 13184945|13183847 13185416|13185416 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 13185065 13185093 3'utr CG16974 FlyBase G8090.1 AAGAGAGCCCCCCATTTGTGATTTCATTA 11 13185072 0.972060849 4 11 68 1 1.230448921 0.176470588 0.272727273 0.529411765 11 0 0 17 2L:13185065-13185093 7 13 156 FBgn0032479 2807.686667 76.92 117.31 0.004630146 0.16900676 0.110817492 1 -5 -2 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 2L 13196492 13196498 + 2L_13196492_13196498_+ 0.620203137 0.62020408 0.620203608 7.07E-07 Edem2 FBtr0080438|FBtr0333235 13196270|13196270 13197281|13197281 2L + 13196457 13196539 3'utr Edem2 FlyBase G4347.1 ATGCCACGAGTTATGGAACTCAGTTTAGGGATCTTTGCATTTCGTGGTTGGTTCTCAGGCAGGCAATTGGCTTCCTAGTGGCT 20 13196491 0.989274348 8 18 169 0.92 1.361727836 0.4 0.2 0.36 20 2 0 23 2L:13196457-13196539 7 Edem2 FBtr0333235|FBtr0080438 13196270|13196270 13197281|13197281 TGCATTT 7mer-m8 dme-miR-277-3p 2L + 13196382 13196540 3'utr Edem2 FlyBase G3385.1 GTAACGTGTGTACAGTAAGCGAACGTAACTAAATTGGAATTTCCTGTACTTTACTAGACATGTAAGAGCGATTTAATGCCACGAGTTATGGAACTCAGTTTAGGGATCTTTGCATTTCGTGGTTGGTTCTCAGGCAGGCAATTGGCTTCCTAGTGGCTA 43 13196491 0.988508391 18 40 372 0.9375 1.77815125 0.4375 0.348837209 0.5625 43 4 0 60 2L:13196382-13196540 7 17.5 157 FBgn0032480 836.01 24.70333333 37.89 0.020932764 0.708406423 0.461863288 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 13197053 13197058 + 2L_13197053_13197058_+ 0.813496174 0.990898831 0.902197502 0.125442581 Edem2 FBtr0080438|FBtr0080438|FBtr0080438|FBtr0333235|FBtr0333235|FBtr0333235 13196270|13196270|13196270|13196270|13196270|13196270 13197281|13197281|13197281|13197281|13197281|13197281 2L + 13197035 13197073 3'utr Edem2 FlyBase G4351.1 TTGTGGATGACAACATATCTGTGAATCGACTAGATGCAA 15 13197052 0.700675943 3 14 93 1 1.230448921 0.235294118 0.133333333 0.235294118 15 0 0 17 2L:13197035-13197073 6 Edem2 FBtr0333235|FBtr0333235|FBtr0333235|FBtr0080438|FBtr0080438|FBtr0080438 13196270|13196270|13196270|13196270|13196270|13196270 13197281|13197281|13197281|13197281|13197281|13197281 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 13197036 13197066 3'utr Edem2 FlyBase G3387.1 TGTGGATGACAACATATCTGTGAATCGACTA 6 13197052 0.707589229 2 4 34 0.857142857 0.77815125 0.142857143 0.166666667 0.285714286 6 1 0 6 2L:13197036-13197066 6 10.5 158 FBgn0032480 836.01 24.70333333 37.89 0.012559658 0.425043854 0.277117973 1 1 1 0.1 dme-miR-305-3p 6mer3-8 ATGTGC 2L 13197438 13197443 - 2L_13197438_13197443_- 1 0.99998513 0.999992565 1.05E-05 CG16972 FBtr0080488 13197100 13197555 2L - 13197358 13197474 3'utr CG16972 FlyBase G10502.1 TTGAATATCACCCAGAATACCCGATCTATAAATGTGCTTTTGGCTGTCTGCCCAAGTATAGTTCAAATATAGGAAACTATAATAAGTTGCGTGTTAAGCCCTGTAGTCCTAACAATC 25 13197457 0.925816835 11 22 158 0.896551724 1.414973348 0.275862069 0.16 0.275862069 25 3 0 26 2L:13197358-13197474 6 CG16972 FBtr0080488 13197100 13197555 ATGTGC 6mer3-8 dme-miR-305-3p 2L - 13197391 13197469 3'utr CG16972 FlyBase G8104.1 TATCACCCAGAATACCCGATCTATAAATGTGCTTTTGGCTGTCTGCCCAAGTATAGTTCAAATATAGGAAACTATAATA 16 13197416 0.858847894 7 15 103 0.952380952 1.301029996 0 0.3125 0.476190476 16 1 0 20 2L:13197391-13197469 6 7.5 159 FBgn0032481 619.7033333 12.68666667 19.43 0.012102565 0.591171834 0.386001029 14 -27 -6.5 0.1 dme-miR-33-5p 6mer2-7 AATGCA 2L 13210742 13210747 + 2L_13210742_13210747_+ 0.799588998 1 0.899794499 0.141711977 Pect FBtr0334752|FBtr0080440|FBtr0080439|FBtr0080441 13210227|13210227|13210227|13210227 13210828|13210828|13210828|13210828 2L + 13210491 13210762 3'utr Pect FlyBase G4366.1 CATTAACGTAGAATATTTAAAATCTAAATTTTATGTATGTAAGCTCAAAATTTGTAAATTCCCTTTAAAGTACGATGTAAGTGTGAGGAACAACAAAATTGTACGAATAGCATGTTATCCAAACTGTTGCCGAATTGAAAAGCCTTGTACGACTTGTATGTATATATATTCAGCAACGGAAGTAGGATGCCTGGATCAGGAAGTAGCTGCTTTTATCAAATGTAATCTCTGATACTTTGTCCTAATTTATTAATGCATATAGTAAGTGCGAG 211 13210712 0.985450504 44 201 1685 0.964980545 1.792391689 0.151750973 0.194312796 0.338521401 211 6 3 248 2L:13210491-13210762 6 Pect FBtr0334752|FBtr0080440|FBtr0080439|FBtr0080441 13210227|13210227|13210227|13210227 13210828|13210828|13210828|13210828 AATGCA 6mer2-7 dme-miR-33-5p 2L + 13210540 13210753 3'utr Pect FlyBase G3403.1 ATTTGTAAATTCCCTTTAAAGTACGATGTAAGTGTGAGGAACAACAAAATTGTACGAATAGCATGTTATCCAAACTGTTGCCGAATTGAAAAGCCTTGTACGACTTGTATGTATATATATTCAGCAACGGAAGTAGGATGCCTGGATCAGGAAGTAGCTGCTTTTATCAAATGTAATCTCTGATACTTTGTCCTAATTTATTAATGCATATAGT 132 13210712 0.938776599 37 117 1063 0.892655367 1.596597096 0.124293785 0.28030303 0.463276836 132 16 3 158 2L:13210540-13210753 6 5.5 160 FBgn0032482 3914.103333 217.82 333.33 0.001405175 0.025250207 0.016500165 30 30 30 0.1 dme-bantam-3p 6mer2-7 GATCTC 2L 13289481 13289486 + 2L_13289481_13289486_+ 0.999925289 0.998958574 0.999441931 0.00068356 Uvrag FBtr0080460|FBtr0334865 13289289|13289289 13289556|13289556 2L + 13289438 13289492 3'utr Uvrag FlyBase G4386.1 TGAACGGTAGTCCATTGCGATAATATTATTTTTAGTTGTTTAAGATCTCTGTGTA 19 13289487 0.991711212 6 19 200 1 1.414973348 0.730769231 0.210526316 0.423076923 19 0 0 26 2L:13289438-13289492 6 Uvrag FBtr0334865|FBtr0080460 13289289|13289289 13289556|13289556 GATCTC 6mer2-7 dme-bantam-3p 2L + 13289437 13289499 3'utr Uvrag FlyBase G3415.1 GTGAACGGTAGTCCATTGCGATAATATTATTTTTAGTTGTTTAAGATCTCTGTGTAAATTCCC 21 13289487 0.992520929 7 21 236 1 1.414973348 0.576923077 0.238095238 0.384615385 21 0 0 26 2L:13289437-13289499 6 18 161 FBgn0032499 266.2566667 13.1 20.21333333 0.067603941 1.374045802 0.890501319 -6 -6 -6 0.1 dme-miR-1012-3p 6mer2-7 TGACTA 2L 13301106 13301111 + 2L_13301106_13301111_+ 0.999990486 0.998585275 0.999287881 0.000993626 CG31729 FBtr0080462|FBtr0344140|FBtr0080461|FBtr0344851 13301064|13301064|13301064|13301064 13301668|13301668|13301516|13301516 2L + 13301050 13301119 stop_codon CG31729 FlyBase G4407.1 CTTGAAGCTCTCTTAGATGGCGGCCTGGCAAATGAAATACAAATTACACATTATCCTGACTATAATTTCC 33 13301100 0.943179603 11 32 204 0.975609756 1.602059991 0.024390244 0.212121212 0.365853659 33 1 0 40 2L:13301050-13301119 6 CG31729 FBtr0344851|FBtr0080461|FBtr0344140|FBtr0080462 13301064|13301064|13301064|13301064 13301516|13301516|13301668|13301668 TGACTA 6mer2-7 dme-miR-1012-3p 2L + 13301088 13301122 3'utr CG31729 FlyBase G3429.2 ACAAATTACACATTATCCTGACTATAATTTCCATT 16 13301100 0.755958543 2 13 111 0.782608696 1.255272505 0 0.3125 0.52173913 16 5 0 18 2L:13301088-13301122 6 18 162 FBgn0051729 1443.476667 38.43 58.66333333 0.012469893 0.468384075 0.306835616 6 6 6 0.1 dme-miR-283-5p 6mer3-8 TGATAT 2L 13301247 13301252 + 2L_13301247_13301252_+ 0.990750307 0.996006556 0.993378431 0.003716765 CG31729 FBtr0080462|FBtr0344140|FBtr0080461|FBtr0344851 13301064|13301064|13301064|13301064 13301668|13301668|13301516|13301516 2L + 13301201 13301303 3'utr CG31729 FlyBase G4409.1 AACTATTCTTTGTTTTGCCAATACCCGCACCAATCCCAAATATACGTGATATCAGGTTAAACTCCCCATCTTCGACACTACACTTTTCACTATGGTATTTTTG 91 13301242 0.886068369 16 86 597 0.953271028 2.008600172 0.102803738 0.142857143 0.271028037 91 5 0 102 2L:13301201-13301303 6 CG31729 FBtr0344851|FBtr0080461|FBtr0344140|FBtr0080462 13301064|13301064|13301064|13301064 13301516|13301516|13301668|13301668 TGATAT 6mer3-8 dme-miR-283-5p 2L + 13301152 13301291 3'utr CG31729 FlyBase G3430.1 GTTATTTACCACTTGATGAGTTGTTCTTTGAACTTGGCAACCATCCCACAACTATTCTTTGTTTTGCCAATACCCGCACCAATCCCAAATATACGTGATATCAGGTTAAACTCCCCATCTTCGACACTACACTTTTCACT 66 13301242 0.986498323 14 58 499 0.901098901 1.311753861 0.164835165 0.272727273 0.472527473 66 6 3 82 2L:13301152-13301291 6 58.5 163 FBgn0051729 1443.476667 38.43 58.66333333 0.040527153 1.522248244 0.997215751 5 5 5 0.1 dme-miR-2a-2-5p 8mer-A1 TGATGAGA 2L 13376051 13376058 + 2L_13376051_13376058_+ 0.601199192 0.601205438 0.601202315 4.38E-06 CG6565 FBtr0080468|FBtr0346420|FBtr0342631 13375839|13375839|13375839 13376165|13376404|13376165 2L + 13375998 13376072 3'utr CG6565 FlyBase G4433.1 TCAGAGCAAGTGTGCAATAGGTGGAAGTTTTGCTCTTAACATGAGTGCCACTTTGATGAGAAACTTAAAAATAAA 9 13376050 0.976265819 6 8 49 0.888888889 0.903089987 0.111111111 0 0 9 1 0 8 2L:13375998-13376072 8 CG6565 FBtr0342631|FBtr0080468|FBtr0346420 13375839|13375839|13375839 13376165|13376165|13376404 TGATGAGA 8mer-A1 dme-miR-2a-2-5p 2L + 13376016 13376062 3'utr CG6565 FlyBase G3445.1 AGGTGGAAGTTTTGCTCTTAACATGAGTGCCACTTTGATGAGAAACT 8 13376050 0.978307487 4 7 48 1 1.113943352 0 0.5 0.692307692 8 0 0 13 2L:13376016-13376062 8 6 164 FBgn0032513 608.7166667 34.34 52.78 0.009856803 0.174723355 0.113679424 1 1 1 0.1 dme-miR-317-5p 6mer2-7 TATCCC 2L 13376490 13376495 - 2L_13376490_13376495_- 0.939605642 0.999855413 0.969730527 0.042603042 CG9302 FBtr0080470 13376453 13376712 2L - 13376482 13376515 3'utr CG9302 FlyBase G10581.1 AATTTCATTTTTACTGCGCTTATCCCTCTATAAT 9 13376501 0.833467586 3 9 101 1 1.079181246 0 0.333333333 0.5 9 0 0 12 2L:13376482-13376515 6 CG9302 FBtr0080470 13376453 13376712 TATCCC 6mer2-7 dme-miR-317-5p 2L - 13376480 13376509 3'utr CG9302 FlyBase G8159.1 ATTTTTACTGCGCTTATCCCTCTATAATAA 13 13376501 0.786437851 5 13 126 1 1.301029996 0 0.307692308 0.55 13 0 0 20 2L:13376480-13376509 6 11 165 FBgn0032514 1605.19 98.23333333 149.59 0.006852771 0.111978283 0.073534327 6 6 6 0.1 dme-miR-986-5p 6mer2-7 TTCGAG 2L 13382259 13382264 + 2L_13382259_13382264_+ 0.987072176 0.998100061 0.992586118 0.007797903 beta'COP FBtr0080469 13382180 13382382 2L + 13382246 13382296 3'utr beta'COP FlyBase G4456.1 ACATTTCGTGCATTTCGAGCCACAGAATTCCGCGCATGCATTCACATTTGA 15 13382273 0.930221863 4 15 60 1 1.342422681 0.272727273 0.4 0.590909091 15 0 0 22 2L:13382246-13382296 6 beta'COP FBtr0080469 13382180 13382382 TTCGAG 6mer2-7 dme-miR-986-5p 2L + 13382248 13382301 3'utr beta'COP FlyBase G3462.1 ATTTCGTGCATTTCGAGCCACAGAATTCCGCGCATGCATTCACATTTGATTTGA 14 13382273 0.783818562 4 13 63 0.956521739 1.342422681 0.565217391 0.428571429 0.652173913 14 1 0 22 2L:13382248-13382301 6 13.5 166 FBgn0025724 1623.336667 63.76333333 97.48 0.008316205 0.211720424 0.138489947 -14 -14 -14 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2L 13385551 13385557 + 2L_13385551_13385557_+ 0.661599324 0.66160751 0.661603417 5.80E-06 loqs FBtr0080497|FBtr0342633|FBtr0342632|FBtr0100220|FBtr0080498 13385231|13385231|13385231|13384666|13385231 13385671|13385671|13385671|13385671|13385671 2L + 13385522 13385574 3'utr loqs FlyBase G4461.1 AGACAAGCGTGTAATCGATATTGGAATCTTCTAGTCGCTTTCAAATTCTGAAA 64 13385550 0.987526409 6 64 568 1 1.944482672 0 0.28125 0.477272727 64 0 0 88 2L:13385522-13385574 7 loqs FBtr0342633|FBtr0342632|FBtr0100220|FBtr0080498|FBtr0080497 13385231|13385231|13384666|13385231|13385231 13385671|13385671|13385671|13385671|13385671 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2L + 13385521 13385566 3'utr loqs FlyBase G3466.1 CAGACAAGCGTGTAATCGATATTGGAATCTTCTAGTCGCTTTCAAA 49 13385550 0.98663556 5 49 413 1 1.838849091 0 0.244897959 0.463768116 49 0 0 69 2L:13385521-13385566 7 55.5 167 FBgn0032515 158.85 11.16666667 17.08333333 0.349386213 4.970149254 3.248780488 1 1 1 0.1 dme-miR-14-3p 7mer-A1 AGACTGA 2L 13394050 13394056 - 2L_13394050_13394056_- 0.823298178 0.823238226 0.823268202 4.24E-05 RpL24 FBtr0342637 13393685 13394412 2L - 13394034 13394074 3'utr RpL24 FlyBase G10595.1 AATTGAATATCCGAAGTTAGACTGAGAGTATAAAAATCGCA 15 13394058 0.801497233 2 15 75 1 1.361727836 0.086956522 0.266666667 0.52173913 15 0 0 23 2L:13394034-13394074 7 RpL24 FBtr0342637 13393685 13394412 AGACTGA 7mer-A1 dme-miR-14-3p 2L - 13394038 13394072 3'utr RpL24 FlyBase G8167.1 TTGAATATCCGAAGTTAGACTGAGAGTATAAAAAT 18 13394058 0.785353793 3 18 74 1 1.431363764 0.222222222 0.444444444 0.62962963 18 0 0 27 2L:13394038-13394072 7 16 168 FBgn0032518 6558.51 1040.203333 1578.5 0.002439579 0.015381608 0.010136205 2 2 2 0.1 dme-miR-932-5p 7mer-A1 GAATTGA 2L 13394348 13394354 - 2L_13394348_13394354_- 0.823319703 0.823291678 0.82330569 1.98E-05 RpL24 FBtr0342637 13393685 13394412 2L - 13394339 13394449 stop_codon RpL24 FlyBase G10596.1 GCAGAAGGCTGCTCCCCGCGTCGGAGGCAAGCGGTAAACACCTTTCGCCGGTAGTGATGTGCTAAAGTTAGTCCAGGATTTAAGGAACCACTCGTGAATTGAAAATTAAAC 107 13394351 0.761265761 19 102 506 0.940740741 1.50174373 0.140740741 0.214953271 0.377777778 107 5 3 127 2L:13394339-13394449 7 RpL24 FBtr0342637 13393685 13394412 GAATTGA 7mer-A1 dme-miR-932-5p 2L - 13394304 13394419 stop_codon RpL24 FlyBase G8168.1 GCGGTAAACACCTTTCGCCGGTAGTGATGTGCTAAAGTTAGTCCAGGATTTAAGGAACCACTCGTGAATTGAAAATTAAACAAACGCCGCGAATGCGAATTCGTGGTGACCAAAAA 122 13394351 0.953629484 18 120 547 0.989795918 2.28780173 0.12244898 0.401639344 0.62755102 122 2 0 194 2L:13394304-13394419 7 69.5 169 FBgn0032518 6558.51 1040.203333 1578.5 0.010596919 0.06681386 0.044029142 -3 -3 -3 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 134009 134014 + 2L_134009_134014_+ 0.999999999 0.999997614 0.999998807 1.70E-06 Gs1 FBtr0078115|FBtr0078114 133681|133681 134472|134472 2L + 133997 134030 5'utr Gs1 FlyBase G475.1 CGTTAATTTTTTGTACCTTTTAGATCAAACAAAC 13 134016 0.70171495 3 13 147 1 1.204119983 0 0.153846154 0.3125 13 0 0 16 2L:133997-134030 6 Gs1 FBtr0078114|FBtr0078115 133681|133681 134472|134472 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 133996 134027 5'utr Gs1 FlyBase G395.1 ACGTTAATTTTTTGTACCTTTTAGATCAAACA 17 134016 0.742041269 2 17 193 1 1.447158031 0 0.470588235 0.678571429 17 0 0 28 2L:133996-134027 6 15 170 FBgn0001142 30.66666667 1.793333333 2.72 0.489130435 8.364312268 5.514705882 -7 -7 -7 0.1 dme-miR-1007-3p 6mer3-8 TGAGCT 2L 13410801 13410806 + 2L_13410801_13410806_+ 1 1 1 0 CG7110 FBtr0080500|FBtr0345438 13410635|13410635 13411047|13410955 2L + 13410765 13410857 3'utr CG7110 FlyBase G4481.1 ATTTTGTAAACAACTCATGTAGTTATAACTTTATAGTGAGCTGGTTCCAAGTGCTTCGGCTGTTTCATTCAGCGACTCTAATACATAAGGCAT 19 13410820 0.748782427 12 17 137 0.923076923 1.380211242 0.153846154 0.210526316 0.423076923 19 2 0 24 2L:13410765-13410857 6 CG7110 FBtr0080500|FBtr0345438 13410635|13410635 13411047|13410955 TGAGCT 6mer3-8 dme-miR-1007-3p 2L + 13410767 13410827 3'utr CG7110 FlyBase G3479.1 TTTGTAAACAACTCATGTAGTTATAACTTTATAGTGAGCTGGTTCCAAGTGCTTCGGCTGT 14 13410784 0.776642792 6 13 105 1 1.322219295 0.19047619 0.285714286 0.523809524 14 0 0 21 2L:13410767-13410827 6 9 171 FBgn0032521 924.9866667 37.5 57.29 0.00972987 0.24 0.157095479 -19 17 -1 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2L 13502806 13502812 - 2L_13502806_13502812_- 0.661615506 0.661615434 0.66161547 7.07E-08 B4 FBtr0332509|FBtr0080514|FBtr0080513 13500622|13502654|13502654 13504503|13504503|13504503 2L - 13502752 13502841 3'utr B4 FlyBase G10603.1 AAGTAGAGTTTAGACACTAAGGTCCAGTTTCTAGTCTTAATTTGAAAACAAATATGAAGCCGTTTCGAAATGGAGACATGCCAAACTTTT 61 13502813 0.952635164 6 58 479 0.974025974 1.875061263 0.077922078 0.229508197 0.38961039 61 2 0 75 2L:13502752-13502841 7 B4 FBtr0080513|FBtr0332509|FBtr0080514 13502654|13500622|13502654 13504503|13504503|13504503 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2L - 13502793 13502840 3'utr B4 FlyBase G8172.1 AGTAGAGTTTAGACACTAAGGTCCAGTTTCTAGTCTTAATTTGAAAAC 45 13502813 0.73558114 2 44 376 0.983606557 1.77815125 0.06557377 0.333333333 0.508196721 45 1 0 60 2L:13502793-13502840 7 48 172 FBgn0023407 923.55 17.94 27.61666667 0.051973364 2.675585284 1.738080869 1 1 1 0.1 dme-bantam-3p 6mer2-7 GATCTC 2L 13503093 13503098 - 2L_13503093_13503098_- 1 1 1 0 B4 FBtr0332509|FBtr0080514|FBtr0080513 13500622|13502654|13502654 13504503|13504503|13504503 2L - 13503075 13503154 3'utr B4 FlyBase G10605.1 ATTGTATATTTGTAAAATAGCATAAACTTTTAGGGCAAAATGCCAAACTTTTACACGATCTCTCGTATTTTGTCGTTCTT 40 13503103 0.791648182 11 36 336 0.96 1.681241237 0.02 0.175 0.34 40 2 0 48 2L:13503075-13503154 6 B4 FBtr0080513|FBtr0332509|FBtr0080514 13502654|13500622|13502654 13504503|13504503|13504503 GATCTC 6mer2-7 dme-bantam-3p 2L - 13503074 13503137 3'utr B4 FlyBase G8173.1 TAGCATAAACTTTTAGGGCAAAATGCCAAACTTTTACACGATCTCTCGTATTTTGTCGTTCTTT 30 13503104 0.681875235 10 28 262 0.866666667 1.591064607 0 0.333333333 0.555555556 30 6 0 39 2L:13503074-13503137 6 29 173 FBgn0023407 923.55 17.94 27.61666667 0.031400574 1.616499443 1.050090525 5 6 5.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2L 13636744 13636750 + 2L_13636744_13636750_+ 0.82334609 0.823349558 0.823347824 2.47E-06 kuz FBtr0080509|FBtr0080510|FBtr0342903 13636648|13636648|13636247 13638238|13639411|13636995 2L + 13636728 13636757 3'utr kuz FlyBase G4505.1 ATAGAATCGCCCGCTGCTAGTCATCGAACT 12 13636742 0.860059869 2 12 49 1 1.079181246 0.166666667 0 0 12 0 0 12 2L:13636728-13636757 7 kuz FBtr0342903|FBtr0080509|FBtr0080510 13636247|13636648|13636648 13636995|13638238|13639411 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L + 13636720 13636757 3'utr kuz FlyBase G3496.1 AACCACATATAGAATCGCCCGCTGCTAGTCATCGAACT 6 13636742 0.945611426 3 6 27 1 0.84509804 0.428571429 0.166666667 0.285714286 6 0 0 7 2L:13636720-13636757 7 9 174 FBgn0259984 6208.386667 134.8066667 206.8566667 0.001449652 0.066762277 0.043508387 2 2 2 0.1 dme-miR-79-3p 7mer-A1 AGCTTTA 2L 13637314 13637320 + 2L_13637314_13637320_+ 0.823349144 0.823349562 0.823349353 3.54E-07 kuz FBtr0080509|FBtr0080510 13636648|13636648 13638238|13639411 2L + 13637289 13637339 stop_codon kuz FlyBase G4507.1 CGTCGCGCCGCCTCCGCTACAAGTAAGCTTTAGTCGGCCGACATCGTTGCA 10 13637312 0.961517742 2 9 58 0.833333333 1 0.416666667 0.2 0.333333333 10 2 0 10 2L:13637289-13637339 7 kuz FBtr0080509|FBtr0080510 13636648|13636648 13638238|13639411 AGCTTTA 7mer-A1 dme-miR-79-3p 2L + 13637298 13637331 stop_codon kuz FlyBase G3497.1 GCCTCCGCTACAAGTAAGCTTTAGTCGGCCGACA 5 13637321 0.894000975 3 5 26 1 0.903089987 0.125 0.2 0.5 5 0 0 8 2L:13637298-13637331 7 7.5 175 FBgn0259984 6208.386667 134.8066667 206.8566667 0.001208043 0.055635231 0.03625699 2 -7 -2.5 0.1 dme-miR-283-5p 8mer-m1 TGATATTT 2L 13637779 13637786 + 2L_13637779_13637786_+ 0.55559354 0.555592919 0.55559323 4.24E-07 kuz FBtr0100660|FBtr0080509|FBtr0080510|FBtr0301412 13637320|13636648|13636648|13637495 13639411|13638238|13639411|13638238 2L + 13637747 13637786 3'utr kuz FlyBase G4509.1 AATTTCGTAATACAGAAAAAGCTGAAAGTGAATGATATTT 9 13637778 0.873734376 4 9 38 1 1.113943352 0.153846154 0.333333333 0.538461538 9 0 0 13 2L:13637747-13637786 8 kuz FBtr0301412|FBtr0080509|FBtr0080510|FBtr0100660 13637495|13636648|13636648|13637320 13638238|13638238|13639411|13639411 TGATATTT 8mer-m1 dme-miR-283-5p 2L + 13637755 13637786 3'utr kuz FlyBase G3500.1 AATACAGAAAAAGCTGAAAGTGAATGATATTT 5 13637779 0.915451934 2 5 19 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2L:13637755-13637786 8 6.5 176 FBgn0259984 6208.386667 134.8066667 206.8566667 0.001046971 0.0482172 0.031422724 1 0 0.5 0.1 dme-miR-968-5p 6mer3-8 ACTACT 2L 13638795 13638800 + 2L_13638795_13638800_+ 0.999999949 0.999999824 0.999999887 7.07E-08 kuz FBtr0100660|FBtr0080510 13637320|13636648 13639411|13639411 2L + 13638724 13638808 3'utr kuz FlyBase G4511.3 TTTTGTCTGTGTTTCGTATTTGCATGCTCAAGAACTAATCGTGCAACTACTCACGGAGTCCCGACTGATGTACTACTCCAAGAAA 107 13638796 0.933798296 10 101 525 0.960629921 2.086359831 0.322834646 0.177570093 0.307086614 107 5 0 122 2L:13638724-13638808 6 kuz FBtr0080510|FBtr0100660 13636648|13637320 13639411|13639411 ACTACT 6mer3-8 dme-miR-968-5p 2L + 13638769 13638808 3'utr kuz FlyBase G3504.1 ACTACTCACGGAGTCCCGACTGATGTACTACTCCAAGAAA 64 13638796 0.703937022 4 62 307 0.990291262 1.707570176 0.40776699 0.40625 0.631067961 64 0 1 102 2L:13638769-13638808 6 73.5 177 FBgn0259984 6208.386667 134.8066667 206.8566667 0.011838824 0.545225261 0.355318498 -1 -1 -1 0.1 dme-miR-92b-3p 7mer-A1 TGCAATA 2L 13773525 13773531 + 2L_13773525_13773531_+ 0.773828583 0.487498655 0.630663619 0.202465814 TM9SF4 FBtr0343657|FBtr0080532 13773482|13773482 13773905|13773905 2L + 13773453 13773550 stop_codon TM9SF4 FlyBase G4524.1 AAGAATCTACGGAGCTGTGAAGATCGACTAAGCTGTGTCACCCACTCGTCACGCTGTACACCAAACTATCCTTGCAATATCATTCGATCATAAATATA 27 13773524 0.98178056 12 26 189 0.96875 1.491361694 0.0625 0.185185185 0.3125 27 1 0 31 2L:13773453-13773550 7 TM9SF4 FBtr0343657|FBtr0080532 13773482|13773482 13773905|13773905 TGCAATA 7mer-A1 dme-miR-92b-3p 2L + 13773453 13773587 stop_codon TM9SF4 FlyBase G3514.1 AAGAATCTACGGAGCTGTGAAGATCGACTAAGCTGTGTCACCCACTCGTCACGCTGTACACCAAACTATCCTTGCAATATCATTCGATCATAAATATATTTATAGAGCAACTGAACCCAGTCTCGTCCAGCTGCA 22 13773524 0.803947929 14 21 133 0.971428571 1.531478917 0.285714286 0.363636364 0.6 22 1 0 34 2L:13773453-13773587 7 14.5 178 FBgn0028541 781.57 38.32 58.46 0.018552401 0.378392484 0.248032843 1 1 1 0.1 dme-miR-1007-3p 6mer3-8 TGAGCT 2L 13773642 13773647 + 2L_13773642_13773647_+ 0.920239431 0.952018665 0.936129048 0.022471359 TM9SF4 FBtr0343657|FBtr0080532 13773482|13773482 13773905|13773905 2L + 13773557 13773684 3'utr TM9SF4 FlyBase G4525.1 GAGCAACTGAACCCAGTCTCGTCCAGCTGCAGAAATCAATATAAACAAAACGGAAACTAAGCGAAAACTCGACGACTCAGCCATGTGAGCTAACTTCCCCTTCTTGTCCCCAGCTGCAGAAAGTCACC 22 13773657 0.949852624 12 21 89 1 1.414973348 0.269230769 0.238095238 0.384615385 21 0 0 26 2L:13773557-13773684 6 TM9SF4 FBtr0343657|FBtr0080532 13773482|13773482 13773905|13773905 TGAGCT 6mer3-8 dme-miR-1007-3p 2L + 13773627 13773678 3'utr TM9SF4 FlyBase G3515.1 GACGACTCAGCCATGTGAGCTAACTTCCCCTTCTTGTCCCCAGCTGCAGAAA 14 13773658 0.980288688 5 12 93 0.761904762 1.204119983 0.095238095 0.357142857 0.571428571 14 5 0 16 2L:13773627-13773678 6 5.5 179 FBgn0028541 781.57 38.32 58.46 0.007037118 0.143528184 0.094081423 -15 -16 -15.5 0.1 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 13782423 13782429 - 2L_13782423_13782429_- 0.815072516 0.822910485 0.818991501 0.005542303 CG16890 FBtr0343661|FBtr0329825 13782229|13782229 13782609|13782609 2L - 13782411 13782462 3'utr CG16890 FlyBase G10642.1 GACACCAAATCTAAAGTTGAACTGGACATTAAGGCTGTGACTCTGATTGATT 21 13782440 0.743182755 7 20 134 0.966666667 1.462397998 0.233333333 0.333333333 0.533333333 21 1 0 29 2L:13782411-13782462 7 CG16890 FBtr0329825|FBtr0343661 13782229|13782229 13782609|13782609 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L - 13782414 13782448 3'utr CG16890 FlyBase G8199.1 AGTTGAACTGGACATTAAGGCTGTGACTCTGATTG 9 13782433 0.73314951 3 9 56 1 1.041392685 0.272727273 0.222222222 0.363636364 9 0 0 11 2L:13782414-13782448 7 14 180 FBgn0028932 129.2066667 16.03333333 24.55666667 0.108353542 0.873180873 0.57010995 11 4 7.5 0.1 dme-miR-980-3p 6mer3-8 GGCAGC 2L 1380777 1380782 - 2L_1380777_1380782_- 0.99855624 0.998509178 0.998532709 3.32E-05 lea FBtr0329985|FBtr0077941 1380084|1380084 1381443|1381611 2L - 1380723 1380813 3'utr lea FlyBase G6798.1 TAGTGTATACACCCACTTAGATAGATCGATGGGCAGCATTTTGTTTGTTACTTAAGGGGTTCGTAATTAGTCTAAGCGTCCAGGCAGATAT 31 1380774 0.704633136 12 30 190 0.972972973 1.556302501 0.135135135 0.161290323 0.297297297 31 1 0 36 2L:1380723-1380813 6 lea FBtr0329985|FBtr0077941 1380084|1380084 1381443|1381611 GGCAGC 6mer3-8 dme-miR-980-3p 2L - 1380700 1380814 3'utr lea FlyBase G5313.1 ATAGTGTATACACCCACTTAGATAGATCGATGGGCAGCATTTTGTTTGTTACTTAAGGGGTTCGTAATTAGTCTAAGCGTCCAGGCAGATATCAATTCAGTAGCCACGAATGTTT 27 1380773 0.981193301 11 26 191 0.974358974 1.579783597 0.076923077 0.37037037 0.564102564 27 1 0 38 2L:1380700-1380814 6 19 181 FBgn0002543 15.93666667 0.32 0.503333333 1.192219201 59.375 37.74834437 -8 -9 -8.5 0.1 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 1380829 1380836 - 2L_1380829_1380836_- 0.62534967 0.625305703 0.625327686 3.11E-05 lea FBtr0329985|FBtr0077941 1380084|1380084 1381443|1381611 2L - 1380816 1380880 3'utr lea FlyBase G6799.1 AAGTTCCTCCAAGTATGCAGACGATGATAGCCAAAACGCTGCGTTAGCTTTAGAGTATACACATA 37 1380837 0.790261873 9 37 221 1 1.633468456 0.023255814 0.162162162 0.279069767 37 0 0 43 2L:1380816-1380880 8 lea FBtr0329985|FBtr0077941 1380084|1380084 1381443|1381611 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 1380817 1380877 3'utr lea FlyBase G5314.1 TTCCTCCAAGTATGCAGACGATGATAGCCAAAACGCTGCGTTAGCTTTAGAGTATACACAT 26 1380837 0.801575355 5 24 140 0.930232558 1.301029996 0.069767442 0.461538462 0.674418605 26 2 1 40 2L:1380817-1380877 8 23 182 FBgn0002543 15.93666667 0.32 0.503333333 1.443212717 71.875 45.69536424 1 1 1 0.1 dme-miR-14-3p 7mer-A1 AGACTGA 2L 1381143 1381149 - 2L_1381143_1381149_- 0.743242528 0.746703118 0.744972823 0.002447014 lea FBtr0329985|FBtr0077941 1380084|1380084 1381443|1381611 2L - 1381116 1381179 3'utr lea FlyBase G6800.2 TGTCACAAATGAGAAATGTGACCAAGACTGAGACTGACAGAGTGCGAGATTCGTGTGAGGATTA 1386 1381151 0.978131239 10 1347 4095 0.975609756 2.369745808 0.387269482 0.164502165 0.311124331 1386 35 6 1640 2L:1381116-1381179 7 lea FBtr0329985|FBtr0077941 1380084|1380084 1381443|1381611 AGACTGA 7mer-A1 dme-miR-14-3p 2L - 1381119 1381176 3'utr lea FlyBase G5316.1 CACAAATGAGAAATGTGACCAAGACTGAGACTGACAGAGTGCGAGATTCGTGTGAGGA 979 1381151 0.967139608 8 943 2772 0.97146402 2.495821753 0.377171216 0.433094995 0.655707196 979 42 4 1566 2L:1381119-1381176 7 1170.5 183 FBgn0002543 15.93666667 0.32 0.503333333 73.44697762 3657.8125 2325.496689 2 2 2 0.1 dme-miR-33-5p 6mer2-7 AATGCA 2L 13819663 13819668 + 2L_13819663_13819668_+ 0.999939853 0.997931924 0.998935889 0.00141987 Sos FBtr0080541 13819377 13819824 2L + 13819608 13819722 3'utr Sos FlyBase G4582.1 AGACAGACAAAATACGCTCTCATTTACACACAACAGGCACGCGCATATGGATAGGAATGCAGGACACACAAACCAAGCAAGCAACCAAGCAACCAACAAGAAATGCAAACAAGAA 24 13819665 0.876529361 7 22 56 0.928571429 1.414973348 0.071428571 0.125 0.25 24 2 0 26 2L:13819608-13819722 6 Sos FBtr0080541 13819377 13819824 AATGCA 6mer2-7 dme-miR-33-5p 2L + 13819643 13819681 3'utr Sos FlyBase G3560.1 GGCACGCGCATATGGATAGGAATGCAGGACACACAAACC 5 13819665 0.9112595 2 5 12 1 0.903089987 0 0.4 0.625 5 0 0 8 2L:13819643-13819681 6 10.5 184 FBgn0001965 887.1 19.05333333 29.30333333 0.011836321 0.551084675 0.35832101 -2 -2 -2 0.1 dme-miR-282-5p 6mer2-7 GAGGCT 2L 13824070 13824075 - 2L_13824070_13824075_- 0.99999943 0.999999936 0.999999683 3.54E-07 tam FBtr0080571 13823978 13824139 2L - 13824042 13824098 3'utr tam FlyBase G10648.1 ACTCAGGAAGTCAAGGAGACTTGGAGGCTGTTACTAGTTCCTCTTAAATTGTAAGGC 28 13824077 0.814754382 7 26 155 0.96875 1.491361694 0.125 0.107142857 0.21875 28 1 0 31 2L:13824042-13824098 6 tam FBtr0080571 13823978 13824139 GAGGCT 6mer2-7 dme-miR-282-5p 2L - 13824042 13824098 3'utr tam FlyBase G8204.1 ACTCAGGAAGTCAAGGAGACTTGGAGGCTGTTACTAGTTCCTCTTAAATTGTAAGGC 19 13824077 0.920677179 7 18 92 1 1.51851394 0.212121212 0.578947368 0.757575758 19 0 0 33 2L:13824042-13824098 6 21 185 FBgn0004406 477.07 15.66333333 23.98666667 0.044018697 1.34071079 0.875486381 2 2 2 0.1 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 13831862 13831868 - 2L_13831862_13831868_- 0.474855773 0.470257498 0.472556635 0.003251489 CG33649 FBtr0091626 13831480 13832624 2L - 13831830 13831884 intron-3'utr CG33649 FlyBase G10670.1 GCTCTGCTTCTGGATGGCTGTGATCATGGCCGGGACTCGCAATCCCTGCTCTTAC 45 13831858 0.841147265 5 44 281 0.981132075 1.716003344 0.698113208 0.155555556 0.283018868 45 1 0 52 2L:13831830-13831884 7 CG33649 FBtr0091626 13831480 13832624 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L - 13831831 13831882 3'utr CG33649 FlyBase G8220.1 TCTGCTTCTGGATGGCTGTGATCATGGCCGGGACTCGCAATCCCTGCTCTTA 34 13831858 0.859863205 4 32 205 0.929824561 1.72427587 0.561403509 0.529411765 0.719298246 34 4 0 53 2L:13831831-13831882 7 38.5 186 FBgn0064115 259.7433333 20.19 30.89333333 0.148223246 1.906884596 1.246223565 -10 -10 -10 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 13831960 13831967 - 2L_13831960_13831967_- 0.650171315 0.650171258 0.650171287 0 CG33649 FBtr0091626|FBtr0091626|FBtr0091626 13831480|13831480|13831480 13832624|13832624|13832624 2L - 13831945 13831991 5'utr CG33649 FlyBase G10671.1 TTGTGCAACCGACTGTCATAAGGTCTGTGATAGAGCTGGAAACTACC 41 13831968 0.738875031 8 35 257 0.85106383 1.124938737 0.468085106 0.146341463 0.255319149 41 5 2 40 2L:13831945-13831991 8 CG33649 FBtr0091626|FBtr0091626|FBtr0091626 13831480|13831480|13831480 13832624|13832624|13832624 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 13831947 13831982 5'utr CG33649 FlyBase G8221.1 CGACTGTCATAAGGTCTGTGATAGAGCTGGAAACTA 17 13831968 0.751527328 3 14 105 0.90625 1.161368002 0.09375 0.411764706 0.6875 17 2 1 29 2L:13831947-13831982 8 27.5 187 FBgn0064115 259.7433333 20.19 30.89333333 0.105873747 1.362060426 0.890159689 1 1 1 0.1 dme-miR-190-5p 6mer3-8 ACATAT 2L 13899027 13899032 - 2L_13899027_13899032_- 0.999974848 0.949332686 0.974653767 0.035809372 Smg5 FBtr0080562 13898826 13899821 2L - 13899020 13899087 3'utr Smg5 FlyBase G10676.1 GCTTCTGACTAGGCAATCCGCGTGATCCTCTTCGCAAGAACAAAGTATATGGTATACATATATATATA 16 13899062 0.788678145 5 15 102 0.95 1.278753601 0.2 0.1875 0.35 16 1 0 19 2L:13899020-13899087 6 Smg5 FBtr0080562 13898826 13899821 ACATAT 6mer3-8 dme-miR-190-5p 2L - 13899027 13899078 3'utr Smg5 FlyBase G8226.1 TAGGCAATCCGCGTGATCCTCTTCGCAAGAACAAAGTATATGGTATACATAT 17 13899062 0.726627003 6 16 85 0.965517241 1.447158031 0.103448276 0.470588235 0.689655172 17 1 0 28 2L:13899027-13899078 5 3 188 FBgn0019890 1083.97 27.57666667 42.05333333 0.002767604 0.108787622 0.071337984 30 30 30 0.1 dme-bantam-3p 6mer3-8 TGATCT 2L 13899145 13899150 - 2L_13899145_13899150_- 0.999904584 0.999903776 0.99990418 5.66E-07 Smg5 FBtr0080562 13898826 13899821 2L - 13899133 13899216 3'utr Smg5 FlyBase G10677.1 TGTACCATGTCGTATTCAAGATTTCGCATTTCCTGTGTCGGGCTGGACTATGGATCCAAAAACTCTTGATCTTTCCTGCAGTTG 20 13899150 0.787885031 11 20 153 1 1.342422681 0.136363636 0.1 0.181818182 20 0 0 22 2L:13899133-13899216 6 Smg5 FBtr0080562 13898826 13899821 TGATCT 6mer3-8 dme-bantam-3p 2L - 13899133 13899181 3'utr Smg5 FlyBase G8227.1 TGTCGGGCTGGACTATGGATCCAAAAACTCTTGATCTTTCCTGCAGTTG 9 13899150 0.979768736 4 9 61 1 1.079181246 0.083333333 0.222222222 0.416666667 9 0 0 12 2L:13899133-13899181 6 11 189 FBgn0019890 1083.97 27.57666667 42.05333333 0.010147882 0.398887949 0.261572606 0 0 0 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG 2L 14048793 14048798 + 2L_14048793_14048798_+ 0.998564619 0.995698657 0.997131638 0.002026497 NimC4 FBtr0080592 14048763 14048863 2L + 14048771 14048818 3'utr NimC4 FlyBase G4599.1 CAGGTTCATCCCTTGGCGTTGGGCTGTGTTATATCAACATTGATTGTT 44 14048799 0.978310372 8 43 408 0.957446809 1.653212514 0 0.068181818 0.127659574 44 2 0 45 2L:14048771-14048818 6 NimC4 FBtr0080592 14048763 14048863 GCTGTG 6mer2-7 dme-miR-1008-3p 2L + 14048772 14048816 3'utr NimC4 FlyBase G3570.1 AGGTTCATCCCTTGGCGTTGGGCTGTGTTATATCAACATTGATTG 32 14048799 0.899308396 8 31 294 0.980769231 1.707570176 0.019230769 0.5 0.692307692 32 1 0 51 2L:14048772-14048816 6 37.5 190 FBgn0260011 2 0.196666667 0.31 18.75 190.6779661 120.9677419 -6 -6 -6 0.1 dme-miR-14-3p 6mer2-7 AGACTG 2L 14184939 14184944 - 2L_14184939_14184944_- 0.997256058 0.999994363 0.99862521 0.00193627 Dyrk2 FBtr0089290|FBtr0089289|FBtr0329933|FBtr0100448|FBtr0100447 14184476|14184476|14184476|14184476|14184476 14186137|14186137|14186065|14186137|14186137 2L - 14184927 14185000 3'utr Dyrk2 FlyBase G10700.1 AAGACGGCAGACAGTTTGATATGAACTTGAGCTGGGTAAGATTGCTTACCAAATCCAGACTGTAATTTGAACGA 9 14184947 0.97246596 6 9 57 1 1.041392685 0.545454545 0.222222222 0.363636364 9 0 0 11 2L:14184927-14185000 6 Dyrk2 FBtr0100447|FBtr0100448|FBtr0329933|FBtr0089289|FBtr0089290 14184476|14184476|14184476|14184476|14184476 14186137|14186137|14186065|14186137|14186137 AGACTG 6mer2-7 dme-miR-14-3p 2L - 14184910 14184968 3'utr Dyrk2 FlyBase G8244.1 TGGGTAAGATTGCTTACCAAATCCAGACTGTAATTTGAACGAAGTTTGTAACCTGTAAT 13 14184935 0.906287318 7 12 84 0.888888889 1.204119983 0.277777778 0.307692308 0.5 13 2 0 16 2L:14184910-14184968 6 7.5 191 FBgn0016930 948.1733333 27.29666667 41.49333333 0.007909946 0.274758823 0.180751928 3 -9 -3 0.1 dme-miR-33-5p 8mer-A1 CAATGCAA 2L 14185290 14185297 - 2L_14185290_14185297_- 0.634511554 0.634507975 0.634509764 2.55E-06 Dyrk2 FBtr0089288|FBtr0089290|FBtr0089289|FBtr0329933|FBtr0100448|FBtr0100447 14185024|14184476|14184476|14184476|14184476|14184476 14186137|14186137|14186137|14186065|14186137|14186137 2L - 14185195 14185325 3'utr Dyrk2 FlyBase G10702.1 ACTACAGGAAATCAACTCTGTAGCCTGCCAATGCAAGATAAATTTGAATTCCGCTTGGATACATATACTTGATCCCATTAAACCAATCCATACGGAATACATGTCATAATTTAATGAAAACACATATTTAA 63 14185294 0.977292234 16 61 387 0.972222222 1.544068044 0.097222222 0.142857143 0.25 63 1 1 70 2L:14185195-14185325 8 Dyrk2 FBtr0100447|FBtr0100448|FBtr0329933|FBtr0089289|FBtr0089290|FBtr0089288 14184476|14184476|14184476|14184476|14184476|14185024 14186137|14186137|14186065|14186137|14186137|14186137 CAATGCAA 8mer-A1 dme-miR-33-5p 2L - 14185280 14185316 3'utr Dyrk2 FlyBase G8246.2 AATCAACTCTGTAGCCTGCCAATGCAAGATAAATTTG 33 14185294 0.951264222 4 32 165 1 1.763427994 0.362068966 0.515151515 0.724137931 33 0 0 58 2L:14185280-14185316 8 39 192 FBgn0016930 948.1733333 27.29666667 41.49333333 0.04113172 1.428745879 0.939910026 -3 -3 -3 0.1 dme-miR-7-5p 6mer2-7 TCTTCC 2L 14185712 14185717 - 2L_14185712_14185717_- 0.999993592 0.999993283 0.999993438 2.12E-07 Dyrk2 FBtr0089288|FBtr0089290|FBtr0089289|FBtr0329933|FBtr0100448|FBtr0336949|FBtr0100447 14185024|14184476|14184476|14184476|14184476|14185660|14184476 14186137|14186137|14186137|14186065|14186137|14186137|14186137 2L - 14185664 14185790 3'utr Dyrk2 FlyBase G10704.1 TATTTCGCTACTGCCATAGCTAAAGGTATTCAAAATCGTATTCACACCCACAAACCCTTCCTGAAAAGTATTCTCTTCCCTCCAACTCCCTCCATCCTTTTACACTGTATTCAAAATGAACAAACCA 467 14185715 0.984860647 17 458 3806 0.979890311 2.428134794 0.142595978 0.139186296 0.265082267 467 10 1 536 2L:14185664-14185790 6 Dyrk2 FBtr0100447|FBtr0336949|FBtr0100448|FBtr0329933|FBtr0089289|FBtr0089290|FBtr0089288 14184476|14185660|14184476|14184476|14184476|14184476|14185024 14186137|14186137|14186137|14186065|14186137|14186137|14186137 TCTTCC 6mer2-7 dme-miR-7-5p 2L - 14185688 14185739 3'utr Dyrk2 FlyBase G8249.1 AAACCCTTCCTGAAAAGTATTCTCTTCCCTCCAACTCCCTCCATCCTTTTAC 223 14185715 0.74952948 6 215 1746 0.968847352 1.714609139 0.130841121 0.349775785 0.548286604 223 5 5 311 2L:14185688-14185739 6 335.5 193 FBgn0016930 948.1733333 27.29666667 41.49333333 0.353838257 12.29087801 8.085636247 -2 -2 -2 0.1 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 14325959 14325966 + 2L_14325959_14325966_+ 0.625363552 0.625363938 0.625363745 2.12E-07 wb FBtr0305063 14325709 14326280 2L + 14325937 14326000 3'utr wb FlyBase G4600.1 CACTCTCATGGGCAGACTGATTTAGCTTTAAGCTAGCGCATCTTGATCCTCAGATAACCGAAAC 27 14325980 0.755398847 5 26 185 0.967741935 1.477121255 0.161290323 0.148148148 0.258064516 27 1 0 30 2L:14325937-14326000 8 wb FBtr0305063 14325709 14326280 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L + 14325935 14325996 3'utr wb FlyBase G3572.1 TTCACTCTCATGGGCAGACTGATTTAGCTTTAAGCTAGCGCATCTTGATCCTCAGATAACCG 18 14325957 0.752506779 4 18 130 1 1.568201724 0.108108108 0.611111111 0.810810811 18 0 0 37 2L:14325935-14325996 8 15.5 194 FBgn0261563 1083 12.21333333 18.64 0.014312096 1.269104803 0.831545064 -21 2 -9.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2L 14327834 14327839 + 2L_14327834_14327839_+ 0.999999918 0.999999716 0.999999817 1.41E-07 wb FBtr0302732|FBtr0302732|FBtr0302732|FBtr0302734|FBtr0302734|FBtr0302734|FBtr0302731|FBtr0302731|FBtr0302731|FBtr0302733|FBtr0302733|FBtr0302733|FBtr0302735|FBtr0302735|FBtr0302735 14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750 14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262 2L + 14327814 14327918 3'utr wb FlyBase G4602.2 AAAACTTTTTCCAAATGTATTGTGATCAATAACGAGTTTAGAGCCACCTATTTATAGCCCTTCACTGCCATATAAGTTAGGTTACTGTAGGATTAGCTTTGAATG 113 14327833 0.861015229 16 103 969 0.916030534 1.602059991 0.083969466 0.123893805 0.244274809 113 9 2 120 2L:14327814-14327918 6 wb FBtr0302731|FBtr0302731|FBtr0302731|FBtr0302732|FBtr0302732|FBtr0302732|FBtr0302734|FBtr0302734|FBtr0302734|FBtr0302733|FBtr0302733|FBtr0302733|FBtr0302735|FBtr0302735|FBtr0302735 14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750 14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 14327782 14327860 3'utr wb FlyBase G3573.1 CGGGCGCATCTGGTTCCTGTTGACGCCACACCAAAACTTTTTCCAAATGTATTGTGATCAATAACGAGTTTAGAGCCAC 45 14327833 0.991308004 8 34 361 0.768115942 0.87917783 0 0.4 0.608695652 45 10 6 53 2L:14327782-14327860 6 49 195 FBgn0261563 1083 12.21333333 18.64 0.045244691 4.012008734 2.628755365 1 1 1 0.1 dme-miR-34-5p 8mer-A1 CACTGCCA 2L 14327876 14327883 + 2L_14327876_14327883_+ 0.677680775 0.396584282 0.537132529 0.198765241 wb FBtr0302732|FBtr0302734|FBtr0302731|FBtr0302733|FBtr0302735 14327750|14327750|14327750|14327750|14327750 14328262|14328262|14328262|14328262|14328262 2L + 14327814 14327918 3'utr wb FlyBase G4602.2 AAAACTTTTTCCAAATGTATTGTGATCAATAACGAGTTTAGAGCCACCTATTTATAGCCCTTCACTGCCATATAAGTTAGGTTACTGTAGGATTAGCTTTGAATG 113 14327874 0.861015229 16 103 969 0.916030534 1.602059991 0.083969466 0.123893805 0.244274809 113 9 2 120 2L:14327814-14327918 8 wb FBtr0302731|FBtr0302732|FBtr0302734|FBtr0302733|FBtr0302735 14327750|14327750|14327750|14327750|14327750 14328262|14328262|14328262|14328262|14328262 CACTGCCA 8mer-A1 dme-miR-34-5p 2L + 14327861 14327911 3'utr wb FlyBase G3573.2 CTATTTATAGCCCTTCACTGCCATATAAGTTAGGTTACTGTAGGATTAGCT 29 14327874 0.871061385 7 24 254 0.857142857 1.556302501 0.19047619 0.379310345 0.571428571 29 6 0 36 2L:14327861-14327911 8 33.5 196 FBgn0261563 1083 12.21333333 18.64 0.030932595 2.74290393 1.7972103 2 2 2 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 2L 14328085 14328090 + 2L_14328085_14328090_+ 0.511619628 0.999981266 0.755800447 0.34532387 wb FBtr0302732|FBtr0302734|FBtr0302731|FBtr0302733|FBtr0302735 14327750|14327750|14327750|14327750|14327750 14328262|14328262|14328262|14328262|14328262 2L + 14328069 14328105 3'utr wb FlyBase G4605.1 ACGGCTTATCAAAAATTGTGTTTATCGAATCTCCAGT 15 14328084 0.802460095 4 13 125 0.944444444 1.230448921 0.222222222 0.2 0.333333333 15 1 0 17 2L:14328069-14328105 6 wb FBtr0302731|FBtr0302732|FBtr0302734|FBtr0302733|FBtr0302735 14327750|14327750|14327750|14327750|14327750 14328262|14328262|14328262|14328262|14328262 TGTGTT 6mer3-8 dme-miR-317-3p 2L + 14328066 14328104 3'utr wb FlyBase G3575.1 CATACGGCTTATCAAAAATTGTGTTTATCGAATCTCCAG 11 14328084 0.830723643 2 11 102 1 1.146128036 0.357142857 0.272727273 0.428571429 11 0 0 14 2L:14328066-14328104 6 12.5 197 FBgn0261563 1083 12.21333333 18.64 0.011542013 1.023471616 0.670600858 1 1 1 0.1 dme-miR-282-5p 6mer2-7 GAGGCT 2L 14345435 14345440 + 2L_14345435_14345440_+ 0.999998814 0.999999569 0.999999191 5.66E-07 CG33090 FBtr0343673|FBtr0343675|FBtr0080624|FBtr0343674 14345339|14345339|14345339|14345339 14345795|14345795|14345790|14345790 2L + 14345416 14345485 3'utr CG33090 FlyBase G4608.1 TTAGTTCGATTCTTCTTTTGAGGCTGAATGTGTAACGAGCTTATCGAGATGGTGCGAGTCGAGGAAGATG 33 14345434 0.911428974 3 33 274 1 1.591064607 0.512820513 0.181818182 0.307692308 33 0 0 39 2L:14345416-14345485 6 CG33090 FBtr0343674|FBtr0080624|FBtr0343675|FBtr0343673 14345339|14345339|14345339|14345339 14345790|14345790|14345795|14345795 GAGGCT 6mer2-7 dme-miR-282-5p 2L + 14345394 14345483 3'utr CG33090 FlyBase G3578.1 AGCACAAAGATTTTCTTAGCGTTTAGTTCGATTCTTCTTTTGAGGCTGAATGTGTAACGAGCTTATCGAGATGGTGCGAGTCGAGGAAGA 40 14345434 0.987651497 8 38 336 0.984375 1.498310554 0.59375 0.375 0.609375 40 0 1 63 2L:14345394-14345483 6 27.5 198 FBgn0028916 435.3333333 15.55666667 24.00333333 0.063169985 1.767730876 1.145674212 1 1 1 0.1 dme-miR-1008-3p 7mer-m8 AGCTGTG 2L 14345533 14345539 + 2L_14345533_14345539_+ 0.664602003 0.591478573 0.628040288 0.051706052 CG33090 FBtr0343673|FBtr0343675|FBtr0080624|FBtr0343674 14345339|14345339|14345339|14345339 14345795|14345795|14345790|14345790 2L + 14345496 14345560 3'utr CG33090 FlyBase G4609.1 AGTGGTTTTCAAATTTATAGCTTTATCTGTACTTTTAAGCTGTGGAATCTGTTGGCGCTTACTCC 14 14345547 0.726806581 8 14 125 1 1.255272505 0.388888889 0.142857143 0.333333333 14 0 0 18 2L:14345496-14345560 7 CG33090 FBtr0343674|FBtr0080624|FBtr0343675|FBtr0343673 14345339|14345339|14345339|14345339 14345790|14345790|14345795|14345795 AGCTGTG 7mer-m8 dme-miR-1008-3p 2L + 14345506 14345560 3'utr CG33090 FlyBase G3579.1 AAATTTATAGCTTTATCTGTACTTTTAAGCTGTGGAATCTGTTGGCGCTTACTCC 9 14345547 0.98792199 4 8 77 0.857142857 1.079181246 0.142857143 0.555555556 0.714285714 9 2 0 12 2L:14345506-14345560 7 8.5 199 FBgn0028916 435.3333333 15.55666667 24.00333333 0.019525268 0.546389544 0.354117484 -14 -14 -14 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 14358579 14358584 + 2L_14358579_14358584_+ 0.952839497 0.999982499 0.976410998 0.033335135 Rab14 FBtr0080627 14358182 14358764 2L + 14358560 14358592 3'utr Rab14 FlyBase G4622.1 AGATCATGTTTTTGTTGGCTGATGAATCCCTGT 12 14358575 0.748451684 2 11 113 0.923076923 1.079181246 0 0.083333333 0.153846154 12 1 0 12 2L:14358560-14358592 6 Rab14 FBtr0080627 14358182 14358764 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L + 14358540 14358590 3'utr Rab14 FlyBase G3589.1 GATGAATTCGTTTGAGATATAGATCATGTTTTTGTTGGCTGATGAATCCCT 9 14358575 0.990281418 5 8 78 0.9375 1.176091259 0.0625 0.444444444 0.6875 9 1 0 15 2L:14358540-14358590 6 10 200 FBgn0015791 1010.613333 102.9433333 157.37 0.009894981 0.097140822 0.063544513 4 4 4 0.1 dme-miR-988-3p 6mer3-8 ACAAGG 2L 14365390 14365395 + 2L_14365390_14365395_+ 0.999999989 1 0.999999994 0 spel1 FBtr0309281|FBtr0080630 14365229|14365229 14366840|14365568 2L + 14365340 14365416 5'utr spel1 FlyBase G4638.1 ACTGAATATTGCTCATCCATGGTTACAAACCATATTCTCCTGATTTGATTACAAGGCTACATCGAAAATGTTGTTTA 22 14365374 0.83156888 9 20 174 0.92 1.361727836 0.28 0.136363636 0.24 22 2 0 23 2L:14365340-14365416 6 spel1 FBtr0080630|FBtr0309281 14365229|14365229 14365568|14366840 ACAAGG 6mer3-8 dme-miR-988-3p 2L + 14365340 14365401 5'utr spel1 FlyBase G3596.1 ACTGAATATTGCTCATCCATGGTTACAAACCATATTCTCCTGATTTGATTACAAGGCTACAT 11 14365374 0.979894701 6 10 78 1 1.301029996 0.1 0.636363636 0.8 11 0 0 20 2L:14365340-14365401 6 4 201 FBgn0015546 654.7233333 24.05333333 36.85 0.006109451 0.166297118 0.108548168 16 16 16 0.1 dme-miR-317-3p 8mer-A1 TGTGTTCA 2L 15011511 15011518 + 2L_15011511_15011518_+ 0.631136629 0.631136714 0.631136671 7.07E-08 l(2)35Bd FBtr0080696 15011357 15011764 2L + 15011502 15011532 3'utr l(2)35Bd FlyBase G4656.1 ATGTTTGTTTGTGTTCATAGGTTTCAATTCA 45 15011510 0.73910665 3 45 557 1 1.698970004 0.08 0.111111111 0.2 45 0 0 50 2L:15011502-15011532 8 l(2)35Bd FBtr0080696 15011357 15011764 TGTGTTCA 8mer-A1 dme-miR-317-3p 2L + 15011500 15011531 3'utr l(2)35Bd FlyBase G3606.1 GTATGTTTGTTTGTGTTCATAGGTTTCAATTC 31 15011510 0.725946935 4 31 379 1 1.72427587 0.037735849 0.483870968 0.698113208 31 0 0 53 2L:15011500-15011531 8 38 202 FBgn0001974 148.6633333 10.34 15.90666667 0.255611112 3.675048356 2.388935457 1 1 1 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 15045019 15045024 - 2L_15045019_15045024_- 0.999956913 0.999996869 0.999976891 2.83E-05 ck FBtr0080724|FBtr0080723|FBtr0343687 15044961|15044961|15044961 15045413|15045413|15045413 2L - 15045016 15045043 3'utr ck FlyBase G10744.1 CCTAACTGCATATCTGTACTGATGACGT 8 15045021 0.925497486 2 8 51 1 1.041392685 0 0.375 0.545454545 8 0 0 11 2L:15045016-15045043 6 ck FBtr0080723|FBtr0343687|FBtr0080724 15044961|15044961|15044961 15045413|15045413|15045413 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L - 15044973 15045040 3'utr ck FlyBase G8282.1 AACTGCATATCTGTACTGATGACGTTTTGTATCAAATACATAGAAATGTTCAATTATTTAATAAATTA 7 15045022 0.980708503 5 7 59 1 0.84509804 0 0 0 7 0 0 7 2L:15044973-15045040 6 6 203 FBgn0000317 907.6633333 14.81666667 22.80666667 0.006610381 0.404949381 0.26308097 -3 -2 -2.5 0.1 dme-miR-1002-5p 6mer3-8 CTACTT 2L 15063436 15063441 - 2L_15063436_15063441_- 0.894740573 0.739220805 0.816980689 0.109969105 vig FBtr0080718|FBtr0080721 15062929|15062929 15064433|15064433 2L - 15063406 15063456 3'utr vig FlyBase G10759.1 TATGCATCATATATACTACTTTTAATTATAAATACCTAACTGAACTTACAC 9 15063443 0.994900684 4 8 108 0.9 0.954242509 0.2 0.111111111 0.2 9 1 0 9 2L:15063406-15063456 6 vig FBtr0080721|FBtr0080718 15062929|15062929 15064433|15064433 CTACTT 6mer3-8 dme-miR-1002-5p 2L - 15063407 15063460 3'utr vig FlyBase G8289.1 GGACTATGCATCATATATACTACTTTTAATTATAAATACCTAACTGAACTTACA 7 15063445 0.815062517 5 6 51 0.888888889 0.903089987 0.555555556 0.142857143 0.333333333 7 1 0 8 2L:15063407-15063460 6 6 204 FBgn0024183 3911.293333 182.2033333 280.32 0.001534019 0.032930243 0.02140411 2 4 3 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2L 15064064 15064070 - 2L_15064064_15064070_- 0.823349562 0.823349562 0.823349562 0 vig FBtr0080718|FBtr0080721 15062929|15062929 15064433|15064433 2L - 15064044 15064091 3'utr vig FlyBase G10763.1 AAGCAAGTGACCTCGTGTAAACTAGTCAGTGTCAGGCTAAGTTATCCT 10 15064069 0.795443369 5 10 62 1 1.079181246 0 0.2 0.333333333 10 0 0 12 2L:15064044-15064091 7 vig FBtr0080721|FBtr0080718 15062929|15062929 15064433|15064433 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 15064049 15064099 3'utr vig FlyBase G8290.1 TCGCGATCAAGCAAGTGACCTCGTGTAAACTAGTCAGTGTCAGGCTAAGTT 9 15064062 0.930467197 4 7 54 0.846153846 1.041392685 0.307692308 0.222222222 0.461538462 9 2 0 11 2L:15064049-15064099 7 8.5 205 FBgn0024183 3911.293333 182.2033333 280.32 0.002173194 0.046651177 0.030322489 -1 -8 -4.5 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2L 15117761 15117766 + 2L_15117761_15117766_+ 0.999892423 0.999999727 0.999946075 7.59E-05 stc FBtr0080705|FBtr0332474|FBtr0332473|FBtr0080706 15117654|15117654|15117654|15117654 15118069|15118069|15118069|15118069 2L + 15117738 15117794 3'utr stc FlyBase G4678.1 TGCAAATGGAAGCCTGGATGTGGAAGACTTATTGATTGAACCTAAATGAGGAAAATT 19 15117758 0.979937767 6 18 128 1 1.301029996 0.3 0.052631579 0.1 19 0 0 20 2L:15117738-15117794 6 stc FBtr0332473|FBtr0080706|FBtr0080705|FBtr0332474 15117654|15117654|15117654|15117654 15118069|15118069|15118069|15118069 AAGACT 6mer3-8 dme-miR-14-3p 2L + 15117743 15117816 3'utr stc FlyBase G3622.1 ATGGAAGCCTGGATGTGGAAGACTTATTGATTGAACCTAAATGAGGAAAATTTTGTGGATGCGCTGCGAGGACA 13 15117770 0.700741998 10 13 78 1 1.278753601 0.210526316 0.384615385 0.578947368 13 0 0 19 2L:15117743-15117816 6 12.5 206 FBgn0001978 2544.616667 74.99333333 115.5233333 0.004912331 0.166681483 0.108203249 3 -9 -3 0.1 dme-miR-1012-3p 7mer-A1 TGACTAA 2L 15504068 15504074 + 2L_15504068_15504074_+ 0.823349562 0.823349562 0.823349562 0 lace FBtr0343735|FBtr0080738 15503914|15503914 15504591|15505018 2L + 15503931 15504149 3'utr lace FlyBase G4694.1 CATAGAAGTTAAGCTTGGGGAAATGGTAACCTCCCCGATTGGTAAACCAAAACTACAACACAGTCCAGATAGTGCTAAATCAATCACGAACGGTGGCTTACATTGACCAAGTTTCAGTTGCACTGGGCTTCTATTTATGACTAATTCTCTGGTTATATGCCTTAAAAGGGAAGATCACTACAGCAACAGAAACAAAACACTACAGCACATAGCTTAAAT 64 15504080 0.98263667 26 61 453 0.961038961 1.568201724 0.155844156 0.171875 0.311688312 64 2 1 74 2L:15503931-15504149 7 lace FBtr0343735|FBtr0080738 15503914|15503914 15504591|15505018 TGACTAA 7mer-A1 dme-miR-1012-3p 2L + 15503926 15504103 3'utr lace FlyBase G3637.1 ACACACATAGAAGTTAAGCTTGGGGAAATGGTAACCTCCCCGATTGGTAAACCAAAACTACAACACAGTCCAGATAGTGCTAAATCAATCACGAACGGTGGCTTACATTGACCAAGTTTCAGTTGCACTGGGCTTCTATTTATGACTAATTCTCTGGTTATATGCCTTAAAAGGGAAG 33 15504046 0.853527746 24 33 196 1 1.672097858 0.14893617 0.363636364 0.553191489 33 0 0 47 2L:15503926-15504103 7 12 207 FBgn0002524 4527.636667 202.88 309.75 0.002650389 0.059148265 0.03874092 -12 22 5 0.1 dme-miR-7-5p 6mer3-8 GTCTTC 2L 15504218 15504223 + 2L_15504218_15504223_+ 0.704415134 0.998857921 0.851636528 0.208202501 lace FBtr0343735|FBtr0080738 15503914|15503914 15504591|15505018 2L + 15504161 15504321 3'utr lace FlyBase G4695.1 ATTAATTATTTAGCATTTACCTCTACGTAGTTGTTATTGTATATGTAAAATCCAATCGTCTTCTTTGGTCGGCTGCTGCATTTTAAGTATTTATAGAAGAGAAAATGACAGCGCAATGTATTGGGCAAATCAGGGTTTGGTTACTTTTATAGCTAAGCTAA 77 15504226 0.843882716 21 71 628 0.936170213 1.245512668 0.308510638 0.168831169 0.319148936 77 2 4 88 2L:15504161-15504321 6 lace FBtr0343735|FBtr0080738 15503914|15503914 15504591|15505018 GTCTTC 6mer3-8 dme-miR-7-5p 2L + 15504194 15504305 3'utr lace FlyBase G3638.1 TTATTGTATATGTAAAATCCAATCGTCTTCTTTGGTCGGCTGCTGCATTTTAAGTATTTATAGAAGAGAAAATGACAGCGCAATGTATTGGGCAAATCAGGGTTTGGTTACT 54 15504226 0.919508083 19 53 414 0.989583333 1.67669361 0.229166667 0.5 0.71875 54 0 1 95 2L:15504194-15504305 6 32.5 208 FBgn0002524 4527.636667 202.88 309.75 0.007178138 0.160193218 0.104923325 -8 -8 -8 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 15646806 15646811 - 2L_15646806_15646811_- 0.75535569 0.755045503 0.755200597 0.000219345 CG4587 FBtr0344778|FBtr0344778|FBtr0344778|FBtr0344775|FBtr0344775|FBtr0344775|FBtr0344773|FBtr0344773|FBtr0344773|FBtr0344774|FBtr0344774|FBtr0344774|FBtr0344776|FBtr0344776|FBtr0344776|FBtr0344777|FBtr0344777|FBtr0344777|FBtr0344779|FBtr0344779|FBtr0344779|FBtr0344780|FBtr0344780|FBtr0344780 15644181|15644181|15644181|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15644181|15644181|15644181|15646334|15646334|15646334|15646334|15646334|15646334 15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834 2L - 15646799 15646840 3'utr CG4587 FlyBase G10811.1 TGTAATCGTTCTAATTATTTTAGACTATACTGTGAGTTCTTT 10 15646804 0.985825752 2 9 85 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 2L:15646799-15646840 6 CG4587 FBtr0344779|FBtr0344779|FBtr0344779|FBtr0344780|FBtr0344780|FBtr0344780|FBtr0344776|FBtr0344776|FBtr0344776|FBtr0344777|FBtr0344777|FBtr0344777|FBtr0344773|FBtr0344773|FBtr0344773|FBtr0344774|FBtr0344774|FBtr0344774|FBtr0344778|FBtr0344778|FBtr0344778|FBtr0344775|FBtr0344775|FBtr0344775 15646334|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15644181|15644181|15644181|15646334|15646334|15646334|15646334|15646334|15646334|15644181|15644181|15644181|15646334|15646334|15646334 15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 15646777 15646822 3'utr CG4587 FlyBase G8318.1 TTTAGACTATACTGTGAGTTCTTTACGTTTCCTTTGTTAACTTATT 6 15646804 0.988047964 3 6 57 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 2L:15646777-15646822 6 7 209 FBgn0028863 451.99 9.723333333 14.98333333 0.015487068 0.719917724 0.467185762 -7 -7 -7 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2L 15647128 15647133 - 2L_15647128_15647133_- 1 0.999999836 0.999999918 1.41E-07 CG4587 FBtr0344778|FBtr0344775|FBtr0344773|FBtr0344774|FBtr0344776|FBtr0344777|FBtr0344779|FBtr0344780 15644181|15646334|15646334|15646334|15646334|15644181|15646334|15646334 15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834 2L - 15647112 15647146 3'utr CG4587 FlyBase G10812.1 ACTGAACAAATGGAAGACTTGAAATACCCGACAGC 5 15647122 0.903427731 2 4 20 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2L:15647112-15647146 6 CG4587 FBtr0344779|FBtr0344780|FBtr0344776|FBtr0344777|FBtr0344773|FBtr0344774|FBtr0344778|FBtr0344775 15646334|15646334|15646334|15644181|15646334|15646334|15644181|15646334 15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834 AAGACT 6mer3-8 dme-miR-14-3p 2L - 15647122 15647172 3'utr CG4587 FlyBase G8319.1 TTTACAACCAAAACTAAATCGAATTCACTGAACAAATGGAAGACTTGAAAT 6 15647136 0.94121709 3 5 26 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 2L:15647122-15647172 6 4.5 210 FBgn0028863 451.99 9.723333333 14.98333333 0.009955972 0.462804251 0.300333704 -11 3 -4 0.1 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 15727656 15727663 - 2L_15727656_15727663_- 0.625364918 0.625364917 0.625364917 0 CycE FBtr0080777|FBtr0080776|FBtr0080773 15727579|15727579|15727579 15728880|15728880|15728880 2L - 15727607 15727688 3'utr CycE FlyBase G10821.1 ATTTAATTTTAAATAATTTCAGAACTACGCTTATATCCATGATTTGATGTTAATAAATAAACGATCGCAAAATCGTAAACTA 23 15727663 0.975729288 8 23 158 1 1.544068044 0.028571429 0.391304348 0.6 23 0 0 35 2L:15727607-15727688 8 CycE FBtr0080776|FBtr0080773|FBtr0080777 15727579|15727579|15727579 15728880|15728880|15728880 TACGCTTA 8mer-A1 dme-miR-965-3p 2L - 15727638 15727674 3'utr CycE FlyBase G8325.1 AATTTCAGAACTACGCTTATATCCATGATTTGATGTT 9 15727663 0.960119302 4 8 60 1 0.954242509 0.111111111 0 0 9 0 0 9 2L:15727638-15727674 8 14 211 FBgn0010382 855.2666667 26.80666667 41.17666667 0.016369164 0.522258145 0.339998381 0 0 0 0.1 dme-miR-317-3p 7mer-A1 GTGTTCA 2L 15727818 15727824 - 2L_15727818_15727824_- 0.823349547 0.823349562 0.823349555 7.07E-08 CycE FBtr0080775|FBtr0080777|FBtr0080774|FBtr0080776|FBtr0305561|FBtr0080773 15727782|15727579|15727782|15727579|15727782|15727579 15728880|15728880|15728880|15728880|15728880|15728880 2L - 15727797 15727852 3'utr CycE FlyBase G10822.1 CGTTAGCTTAGGCATAAATAACATGTAAGTGTTCATACGATTAAGGCTGGATTGAA 14 15727813 0.67459831 7 11 88 0.8125 0.812913357 0.0625 0.142857143 0.25 14 2 1 13 2L:15727797-15727852 7 CycE FBtr0080774|FBtr0080776|FBtr0305561|FBtr0080773|FBtr0080775|FBtr0080777 15727782|15727579|15727782|15727579|15727782|15727579 15728880|15728880|15728880|15728880|15728880|15728880 GTGTTCA 7mer-A1 dme-miR-317-3p 2L - 15727799 15727843 3'utr CycE FlyBase G8326.1 AGGCATAAATAACATGTAAGTGTTCATACGATTAAGGCTGGATTG 20 15727828 0.791528631 8 13 140 0.68 1.230448921 0.24 0.2 0.36 20 8 0 17 2L:15727799-15727843 7 15 212 FBgn0010382 855.2666667 26.80666667 41.17666667 0.01753839 0.559562298 0.36428398 -11 4 -3.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2L 15728514 15728519 - 2L_15728514_15728519_- 0.879074445 0.999462806 0.939268625 0.085127454 CycE FBtr0080775|FBtr0080777|FBtr0080774|FBtr0080776|FBtr0305561|FBtr0080773 15727782|15727579|15727782|15727579|15727782|15727579 15728880|15728880|15728880|15728880|15728880|15728880 2L - 15728499 15728582 3'utr CycE FlyBase G10825.1 TATATATACACATACACTTATAGTATAGCAGACCAGACAAAACTGAATTAACCATTAGACTAATACCTGCTGAAAAGGAGCACA 60 15728528 0.893784426 9 59 381 0.985294118 1.826074803 0.220588235 0.116666667 0.220588235 60 1 0 67 2L:15728499-15728582 6 CycE FBtr0080774|FBtr0080776|FBtr0305561|FBtr0080773|FBtr0080775|FBtr0080777 15727782|15727579|15727782|15727579|15727782|15727579 15728880|15728880|15728880|15728880|15728880|15728880 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2L - 15728500 15728581 3'utr CycE FlyBase G8328.1 ATATATACACATACACTTATAGTATAGCAGACCAGACAAAACTGAATTAACCATTAGACTAATACCTGCTGAAAAGGAGCAC 36 15728528 0.889757844 9 34 192 0.960784314 1.69019608 0.274509804 0.305555556 0.509803922 36 2 0 49 2L:15728500-15728581 6 36.5 213 FBgn0010382 855.2666667 26.80666667 41.17666667 0.042676748 1.361601592 0.88642435 9 9 9 0.1 dme-bantam-3p 6mer3-8 TGATCT 2L 15765909 15765914 + 2L_15765909_15765914_+ 0.999997154 0.999999987 0.999998571 1.98E-06 CG3793 FBtr0080761|FBtr0305560 15765710|15765710 15766123|15766267 2L + 15765881 15765936 3'utr CG3793 FlyBase G4713.1 TTATCCTACACAGAGACCCACTCACAAATGATCTAATTTGTATTAATTTAGTTGTT 72 15765909 0.982706057 6 70 523 0.976470588 1.618048097 0.235294118 0.152777778 0.282352941 72 1 1 83 2L:15765881-15765936 6 CG3793 FBtr0080761|FBtr0305560 15765710|15765710 15766123|15766267 TGATCT 6mer3-8 dme-bantam-3p 2L + 15765888 15765934 3'utr CG3793 FlyBase G3654.1 ACACAGAGACCCACTCACAAATGATCTAATTTGTATTAATTTAGTTG 40 15765909 0.950972225 5 39 276 1 1.755874856 0.315789474 0.3 0.50877193 40 0 0 57 2L:15765888-15765934 6 54.5 214 FBgn0028507 251.2366667 19.03666667 29.20666667 0.216926935 2.862896165 1.866012326 0 0 0 0.1 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 2L 1594849 1594856 - 2L_1594849_1594856_- 0.625364009 0.625363375 0.625363692 4.24E-07 CG31935 FBtr0077916 1594820 1595042 2L - 1594845 1594882 3'utr CG31935 FlyBase G6814.1 AATCATGCTACTCAAATTGGTGTTATTGGTGCTATGCA 48 1594857 0.784968798 6 47 417 0.982758621 1.755874856 0.224137931 0.145833333 0.293103448 48 1 0 57 2L:1594845-1594882 8 CG31935 FBtr0077916 1594820 1595042 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 2L - 1594845 1594878 3'utr CG31935 FlyBase G5325.1 ATGCTACTCAAATTGGTGTTATTGGTGCTATGCA 31 1594857 0.666701911 2 27 256 0.886363636 0.892094603 0.25 0.290322581 0.5 31 1 4 39 2L:1594845-1594878 8 39 215 FBgn0051935 254.24 10.08666667 15.46333333 0.153398364 3.866490416 2.522095279 1 1 1 0.1 dme-miR-252-5p 8mer-m1 GTACTTAG 2L 16040344 16040351 + 2L_16040344_16040351_+ 0.636783597 0.636784989 0.636784293 9.90E-07 beat-Ic FBtr0343727|FBtr0080801|FBtr0343726 16039529|16039529|16039529 16041703|16040407|16041703 2L + 16040319 16040374 3'utr beat-Ic FlyBase G4730.1 GTGCTCAGTCACTGAAAATCAAAATGTACTTAGAATAAATACTATGTACTTCAAAC 11 16040343 0.96332242 3 10 64 1 1.041392685 0 0 0 11 0 0 11 2L:16040319-16040374 8 beat-Ic FBtr0343726|FBtr0080801|FBtr0343727 16039529|16039529|16039529 16041703|16040407|16041703 GTACTTAG 8mer-m1 dme-miR-252-5p 2L + 16040330 16040376 3'utr beat-Ic FlyBase G3665.1 CTGAAAATCAAAATGTACTTAGAATAAATACTATGTACTTCAAACTC 6 16040343 0.974847067 2 6 36 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2L:16040330-16040376 8 7 216 FBgn0028644 8.996666667 0.243333333 0.383333333 0.77806595 28.76712329 18.26086957 1 1 1 0.1 dme-miR-307a-3p 7mer-A1 GTTGTGA 2L 16041276 16041282 + 2L_16041276_16041282_+ 0.519810266 0.823335568 0.671572917 0.214624798 beat-Ic FBtr0343727|FBtr0343726 16039529|16039529 16041703|16041703 2L + 16041240 16041305 3'utr beat-Ic FlyBase G4732.1 AAACTGCATGCCGCCAGATTTTTGTAATCAAATCGTGTTGTGAAAGTTGTCTTCCCTAATTTATGC 6 16041286 0.991820514 5 5 59 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2L:16041240-16041305 7 beat-Ic FBtr0343726|FBtr0343727 16039529|16039529 16041703|16041703 GTTGTGA 7mer-A1 dme-miR-307a-3p 2L + 16041264 16041288 3'utr beat-Ic FlyBase G3666.1 TAATCAAATCGTGTTGTGAAAGTTG 6 16041274 0.688689033 4 6 36 1 1.041392685 0.636363636 0.5 0.727272727 6 0 0 11 2L:16041264-16041288 7 4.5 217 FBgn0028644 8.996666667 0.243333333 0.383333333 0.500185254 18.49315068 11.73913043 -10 2 -4 0.1 dme-bantam-3p 6mer3-8 TGATCT 2L 16245846 16245851 - 2L_16245846_16245851_- 0.99999458 0.999988534 0.999991557 4.31E-06 PRL-1 FBtr0332358|FBtr0080856|FBtr0080857|FBtr0332357 16245833|16245833|16245833|16245833 16247074|16247074|16247074|16247074 2L - 16245829 16245885 3'utr PRL-1 FlyBase G10852.1 TTTTAAAATGTTAGTCATTACAAGGAAATAAAAATGATCTATATTAAAATTAACCAA 108 16245851 0.839246314 10 107 690 0.992 2.093421685 0.024 0.148148148 0.264 108 1 0 124 2L:16245829-16245885 6 PRL-1 FBtr0332357|FBtr0080857|FBtr0080856|FBtr0332358 16245833|16245833|16245833|16245833 16247074|16247074|16247074|16247074 TGATCT 6mer3-8 dme-bantam-3p 2L - 16245830 16245881 3'utr PRL-1 FlyBase G8347.1 AAAATGTTAGTCATTACAAGGAAATAAAAATGATCTATATTAAAATTAACCA 69 16245851 0.848801118 6 66 436 0.966292135 1.633468456 0.078651685 0.260869565 0.426966292 69 2 1 86 2L:16245830-16245881 6 83 218 FBgn0024734 9266.433333 401.94 617.5566667 0.00895706 0.206498482 0.134400622 0 0 0 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 16246491 16246498 - 2L_16246491_16246498_- 0.500116253 0.500117058 0.500116655 5.66E-07 PRL-1 FBtr0332358|FBtr0080856|FBtr0080857|FBtr0332357 16245833|16245833|16245833|16245833 16247074|16247074|16247074|16247074 2L - 16246386 16246523 3'utr PRL-1 FlyBase G10854.1 CATCTATATTCTAAAACTGTAAAATGTACTTAATCGCATATTAGTTTGAAGCTCAGCCCTCAAAAATTTGCATTATTTATATTTTGTTTTTTATCTTCTTTTCACTTCGTCCACTTTTCGCTATCAATGGGTGAAGGC 216 16246499 0.982459859 10 214 1606 0.988549618 2.413299764 0.053435115 0.171296296 0.316793893 216 3 0 259 2L:16246386-16246523 8 PRL-1 FBtr0332357|FBtr0080857|FBtr0080856|FBtr0332358 16245833|16245833|16245833|16245833 16247074|16247074|16247074|16247074 GTACTTAA 8mer-A1 dme-miR-252-5p 2L - 16246462 16246519 3'utr PRL-1 FlyBase G8350.1 TATATTCTAAAACTGTAAAATGTACTTAATCGCATATTAGTTTGAAGCTCAGCCCTCA 153 16246499 0.972799835 4 149 1111 0.980952381 1.836745966 0.052380952 0.274509804 0.471428571 153 2 2 206 2L:16246462-16246519 8 178 219 FBgn0024734 9266.433333 401.94 617.5566667 0.019209117 0.442852167 0.288232659 1 1 1 0.1 dme-miR-278-3p 6mer3-8 CCCACC 2L 16247046 16247051 - 2L_16247046_16247051_- 0.990398849 0.985178681 0.987788765 0.003691168 PRL-1 FBtr0332358|FBtr0080856|FBtr0080857|FBtr0332357 16245833|16245833|16245833|16245833 16247074|16247074|16247074|16247074 2L - 16246892 16247134 stop_codon PRL-1 FlyBase G10856.1 AAGCCAAAGGCGAGACTAAAGCACAAAAATGGTCATAAGAATTCATGTTCTGTGCAATAGATTTCCAACACCATATGTATATTCCCACCAGACAAAAAGTGTTCATTTTTTCAAAAACAAAAAAAAAAAATGCAAGCGGATAGAAAAGCGCATACACAAATATGAATTGATAGGCAGCAATCCGTAAAATTGAACTAACCACAGAGAGCCCAAAAATATGGAAGGAGAAATTGAGTTACAGCC 175 16247053 0.98599814 31 153 1335 0.874371859 1.939519253 0.08040201 0.125714286 0.231155779 175 24 1 174 2L:16246892-16247134 6 PRL-1 FBtr0332357|FBtr0080857|FBtr0080856|FBtr0332358 16245833|16245833|16245833|16245833 16247074|16247074|16247074|16247074 CCCACC 6mer3-8 dme-miR-278-3p 2L - 16247021 16247177 stop_codon PRL-1 FlyBase G8352.1 CGGAGCCATTAATGCCAAGCAGCTGTCCTTTTTGGAAAAATACAAGCCAAAGGCGAGACTAAAGCACAAAAATGGTCATAAGAATTCATGTTCTGTGCAATAGATTTCCAACACCATATGTATATTCCCACCAGACAAAAAGTGTTCATTTTTTCAA 131 16247053 0.952278126 24 105 1068 0.811428571 1.374137094 0.137142857 0.27480916 0.457142857 131 28 5 142 2L:16247021-16247177 6 114.5 220 FBgn0024734 9266.433333 401.94 617.5566667 0.012356426 0.284868388 0.185408087 2 2 2 0.1 dme-miR-307a-3p 7mer-A1 GTTGTGA 2L 16260057 16260063 - 2L_16260057_16260063_- 0.823347605 0.823348208 0.823347906 4.24E-07 twe FBtr0331445|FBtr0331444|FBtr0080855|FBtr0331446 16259412|16259875|16259412|16259875 16260224|16260224|16260224|16260224 2L - 16260045 16260091 3'utr twe FlyBase G10871.1 GGTTCATTTCTTGTTGCGTTGTTCAAATGTTGTGAAAGCACTTTATA 19 16260062 0.984895325 4 19 164 1 1.361727836 0.652173913 0.210526316 0.347826087 19 0 0 23 2L:16260045-16260091 7 twe FBtr0080855|FBtr0331446|FBtr0331445|FBtr0331444 16259412|16259875|16259412|16259875 16260224|16260224|16260224|16260224 GTTGTGA 7mer-A1 dme-miR-307a-3p 2L - 16260042 16260076 3'utr twe FlyBase G8366.1 GCGTTGTTCAAATGTTGTGAAAGCACTTTATATTT 10 16260062 0.677341797 4 10 74 1 1.255272505 0.722222222 0.6 0.777777778 10 0 0 18 2L:16260042-16260076 7 14.5 221 FBgn0002673 160.84 8.683333333 13.39 0.090151704 1.669865643 1.082897685 -1 -1 -1 0.1 dme-bantam-3p 7mer-A1 GATCTCA 2L 16260161 16260167 - 2L_16260161_16260167_- 0.823328274 0.785020372 0.804174323 0.027087776 twe FBtr0331445|FBtr0331444|FBtr0080855|FBtr0331446 16259412|16259875|16259412|16259875 16260224|16260224|16260224|16260224 2L - 16260116 16260201 3'utr twe FlyBase G10872.1 TCTCGAATCGATCCACCTGCCATAAGCTCACAGAGATCTCAATGAGAAACGATGGCTGCCCAATTTTACTCATAGAATTATTTTGT 71 16260159 0.904819227 9 67 276 0.945054945 1.33243846 0.241758242 0.23943662 0.406593407 71 2 3 86 2L:16260116-16260201 7 twe FBtr0080855|FBtr0331446|FBtr0331445|FBtr0331444 16259412|16259875|16259412|16259875 16260224|16260224|16260224|16260224 GATCTCA 7mer-A1 dme-bantam-3p 2L - 16260116 16260200 3'utr twe FlyBase G8367.1 CTCGAATCGATCCACCTGCCATAAGCTCACAGAGATCTCAATGAGAAACGATGGCTGCCCAATTTTACTCATAGAATTATTTTGT 82 16260159 0.931880483 9 81 298 0.991596639 2.071882007 0.25210084 0.353658537 0.554621849 82 1 0 118 2L:16260116-16260200 7 47.5 222 FBgn0002673 160.84 8.683333333 13.39 0.295324546 5.47024952 3.54742345 -8 -8 -8 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 2L 16263929 16263934 - 2L_16263929_16263934_- 0.999424687 0.669367807 0.834396247 0.233385472 crp FBtr0343814 16263554 16265520 2L - 16263892 16264032 3'utr crp FlyBase G10877.1 CTTTCAACAAAAGAATGCGCACGTTTGAGCTAGAGGTCAATGCTGCAGCTGTCTGCCTTCGCCAAGCTGCGTCTGCGCTGTGCAATTTCAGTTTCTTCTTGACTTTGTTCAACACGTCTCATAGCTGCCAGCTAGGACACC 147 16263927 0.786876637 24 136 1139 0.951351351 1.643452676 0.064864865 0.19047619 0.356756757 147 6 3 176 2L:16263892-16264032 6 crp FBtr0343814 16263554 16265520 TTGACT 6mer3-8 dme-miR-1012-3p 2L - 16263893 16264028 3'utr crp FlyBase G8371.1 CAACAAAAGAATGCGCACGTTTGAGCTAGAGGTCAATGCTGCAGCTGTCTGCCTTCGCCAAGCTGCGTCTGCGCTGTGCAATTTCAGTTTCTTCTTGACTTTGTTCAACACGTCTCATAGCTGCCAGCTAGGACAC 87 16263927 0.98380322 19 81 630 0.95 1.755874856 0.141666667 0.298850575 0.491666667 87 5 1 114 2L:16263893-16264028 6 34.5 223 FBgn0001994 2020.376667 59.00666667 90.54333333 0.017076024 0.584679697 0.381033023 -7 -7 -7 0.1 dme-miR-283-5p 6mer3-8 TGATAT 2L 16264517 16264522 - 2L_16264517_16264522_- 0.999973669 0.57688899 0.78843133 0.29916606 crp FBtr0343814|FBtr0080854 16263554|16264419 16265520|16265520 2L - 16264445 16264573 3'utr crp FlyBase G10878.1 GTTCATAGGCGTACATTATATACTTTTGAATGGAACTTATTGAGTTTTTGTTGATATATTTGTGTAAAAAAATTTTAAGTCTAATTATGTAAGCGAGTGATGAGCGTAGGTGGTAAACATTAAACAAAG 56 16264525 0.988091356 21 52 484 0.939393939 1.491361694 0.454545455 0.160714286 0.287878788 56 3 1 62 2L:16264445-16264573 6 crp FBtr0343814|FBtr0080854 16263554|16264419 16265520|16265520 TGATAT 6mer3-8 dme-miR-283-5p 2L - 16264455 16264559 3'utr crp FlyBase G8373.1 ATTATATACTTTTGAATGGAACTTATTGAGTTTTTGTTGATATATTTGTGTAAAAAAATTTTAAGTCTAATTATGTAAGCGAGTGATGAGCGTAGGTGGTAAACA 27 16264526 0.726366758 13 25 214 0.880952381 1.267171728 0.214285714 0.222222222 0.5 27 4 1 37 2L:16264455-16264559 6 13.5 224 FBgn0001994 2020.376667 59.00666667 90.54333333 0.006681922 0.228787708 0.149099879 3 4 3.5 0.1 dme-miR-980-5p 6mer2-7 AAAAAC 2L 16264630 16264635 - 2L_16264630_16264635_- 0.96686947 0.980694353 0.973781912 0.009775681 crp FBtr0343814|FBtr0080854 16263554|16264419 16265520|16265520 2L - 16264597 16264701 3'utr crp FlyBase G10879.1 TTTGAACGTTGAACGAGATGCCGAAATTGTTTAAGCATGTTTAATTGATGATTCCTTGAACTCTATAAAAACCATCGCATTAATTTTTACCTTTTTTTAAATTAT 26 16264646 0.981888561 11 26 196 1 1.51851394 0.454545455 0.115384615 0.303030303 26 0 0 33 2L:16264597-16264701 6 crp FBtr0343814|FBtr0080854 16263554|16264419 16265520|16265520 AAAAAC 6mer2-7 dme-miR-980-5p 2L - 16264603 16264666 3'utr crp FlyBase G8374.1 CATGTTTAATTGATGATTCCTTGAACTCTATAAAAACCATCGCATTAATTTTTACCTTTTTTTA 13 16264645 0.97451474 6 12 120 0.928571429 1.113943352 0.214285714 0.076923077 0.142857143 13 1 0 13 2L:16264603-16264666 6 11 225 FBgn0001994 2020.376667 59.00666667 90.54333333 0.005444529 0.186419614 0.12148879 11 10 10.5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2L 16265188 16265193 - 2L_16265188_16265193_- 0.996739652 0.999520667 0.99813016 0.001966464 crp FBtr0343814|FBtr0080854 16263554|16264419 16265520|16265520 2L - 16265152 16265242 3'utr crp FlyBase G10884.1 TAGTAGCATCATCAGCAGCAGCAGCCACAGAAATGTTAAAGAGACTGTTACCAAACAGAGGCAGAGGCAAAAGAATGTAAATTAGTAAGAG 54 16265195 0.865602634 10 53 219 0.985294118 1.525044807 0.117647059 0.203703704 0.367647059 54 0 1 67 2L:16265152-16265242 6 crp FBtr0343814|FBtr0080854 16263554|16264419 16265520|16265520 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 16265146 16265265 3'utr crp FlyBase G8375.1 AACCTTATTGTAAGCAGTAAAACTAGTAGCATCATCAGCAGCAGCAGCCACAGAAATGTTAAAGAGACTGTTACCAAACAGAGGCAGAGGCAAAAGAATGTAAATTAGTAAGAGTTTAAC 48 16265195 0.95831287 10 44 215 0.9375 1.301029996 0.15625 0.270833333 0.453125 48 2 2 60 2L:16265146-16265265 6 39 226 FBgn0001994 2020.376667 59.00666667 90.54333333 0.019303331 0.660942266 0.430732982 2 2 2 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 2L 16290916 16290922 + 2L_16290916_16290922_+ 0.782795249 0.782396063 0.782595656 0.000282206 pkaap FBtr0080826 16290778 16291195 2L + 16290875 16290957 3'utr pkaap FlyBase G4749.1 AGAAGTCGCAACAGAAGCTCTCTCTAGTACCCTCTCCTTATGTACAAATTGTGTTGAACAAATCAAATACTTTACTTTAACTT 30 16290914 0.98682668 10 29 249 0.972972973 1.255272505 0.081081081 0.166666667 0.324324324 30 0 1 36 2L:16290875-16290957 7 pkaap FBtr0080826 16290778 16291195 GTACAAA 7mer-A1 dme-miR-305-5p 2L + 16290878 16290942 3'utr pkaap FlyBase G3682.1 AGTCGCAACAGAAGCTCTCTCTAGTACCCTCTCCTTATGTACAAATTGTGTTGAACAAATCAAAT 31 16290914 0.98586447 9 30 254 0.976190476 1.311753861 0.357142857 0.258064516 0.452380952 31 0 1 41 2L:16290878-16290942 7 26.5 227 FBgn0040079 291.3133333 14.45 22.03666667 0.090967343 1.833910035 1.202541219 2 2 2 0.1 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 16296371 16296378 - 2L_16296371_16296378_- 0.625363803 0.625361618 0.62536271 1.56E-06 heix FBtr0080852 16296049 16297554 2L - 16296364 16296398 3'utr heix FlyBase G10902.1 AGCGTATGCATATAAACAAATAGCTTTAAATAACA 8 16296378 0.865181327 2 6 49 0.75 0.77815125 0 0 0 8 2 0 6 2L:16296364-16296398 8 heix FBtr0080852 16296049 16297554 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 16296360 16296401 3'utr heix FlyBase G8388.1 AATAGCGTATGCATATAAACAAATAGCTTTAAATAACAAACA 10 16296378 0.902756392 2 9 55 0.909090909 0.698970004 0 0.1 0.181818182 10 0 1 10 2L:16296360-16296401 8 9 228 FBgn0028375 808.1233333 31.42 48.33666667 0.011136914 0.286441757 0.186194056 0 0 0 0.1 dme-miR-33-5p 6mer2-7 AATGCA 2L 16296725 16296730 - 2L_16296725_16296730_- 0.562026497 1 0.781013248 0.309694032 heix FBtr0080852 16296049 16297554 2L - 16296717 16296746 3'utr heix FlyBase G10904.1 AAGTTTCGCGAATCAAAATGCAGATTTACT 5 16296742 0.786109469 4 5 32 1 0.77815125 0.5 0.2 0.333333333 5 0 0 6 2L:16296717-16296746 6 heix FBtr0080852 16296049 16297554 AATGCA 6mer2-7 dme-miR-33-5p 2L - 16296712 16296746 3'utr heix FlyBase G8389.1 AAGTTTCGCGAATCAAAATGCAGATTTACTTTATG 6 16296734 0.826028147 3 5 40 0.8 0.903089987 0.1 0.666666667 0.8 6 2 0 8 2L:16296712-16296746 6 5.5 229 FBgn0028375 808.1233333 31.42 48.33666667 0.006805892 0.17504774 0.113785256 12 4 8 0.1 dme-miR-190-5p 7mer-m8 ACATATC 2L 16297344 16297350 - 2L_16297344_16297350_- 0.671441812 0.674514047 0.67297793 0.002172373 heix FBtr0080852 16296049 16297554 2L - 16297328 16297398 3'utr heix FlyBase G10905.1 ATTTCGAATGCTGCTAGTCGCCCGTTTGATTCTAAACTTTTGAACTGAACATATCCTAGCCCTAATGGGTC 15 16297342 0.864212075 6 15 92 1 1.278753601 0.052631579 0.266666667 0.421052632 15 0 0 19 2L:16297328-16297398 7 heix FBtr0080852 16296049 16297554 ACATATC 7mer-m8 dme-miR-190-5p 2L - 16297326 16297387 3'utr heix FlyBase G8390.1 TGCTAGTCGCCCGTTTGATTCTAAACTTTTGAACTGAACATATCCTAGCCCTAATGGGTCGA 9 16297343 0.820352521 4 7 65 1 1.204119983 0.0625 0.555555556 0.75 9 0 0 16 2L:16297326-16297387 7 8.5 230 FBgn0028375 808.1233333 31.42 48.33666667 0.010518196 0.270528326 0.175849941 -8 -7 -7.5 0.1 dme-miR-92b-3p 7mer-m8 GTGCAAT 2L 16297495 16297501 - 2L_16297495_16297501_- 0.658421696 0.595900689 0.627161193 0.044209023 heix FBtr0080852 16296049 16297554 2L - 16297455 16297520 3'utr heix FlyBase G10906.1 CTGAATCAGTGAGAACCTGGTGCAATGTTTTAGGGAATTTCATTAGGTTTTAGTCAATGTGAGTAA 12 16297502 0.980502958 7 10 76 0.833333333 0.698970004 0.333333333 0 0 12 1 1 10 2L:16297455-16297520 7 heix FBtr0080852 16296049 16297554 GTGCAAT 7mer-m8 dme-miR-92b-3p 2L - 16297499 16297549 3'utr heix FlyBase G8391.1 GGGTTAAACGTACGGATCTGGCGGAAAATCTGAATCAGTGAGAACCTGGTG 5 16297518 0.973126781 3 3 27 0.833333333 0.698970004 0.166666667 0.2 0.333333333 5 1 0 5 2L:16297499-16297549 2 5 231 FBgn0028375 808.1233333 31.42 48.33666667 0.006187174 0.159134309 0.103441142 1 17 9 0.1 dme-miR-31a-5p 7mer-A1 CTTGCCA 2L 16301756 16301762 - 2L_16301756_16301762_- 0.821667807 0.671228588 0.746448198 0.106376578 CG5869 FBtr0080851 16301654 16302076 2L - 16301720 16301781 3'utr CG5869 FlyBase G10913.1 AATCTTAATAGAAGCTGTGCTTGCCAAATTTCTACATGTATTTATTGTAAAGATATAAAAGC 16 16301760 0.723374332 9 16 117 1 1.397940009 0.04 0.375 0.6 16 0 0 25 2L:16301720-16301781 7 CG5869 FBtr0080851 16301654 16302076 CTTGCCA 7mer-A1 dme-miR-31a-5p 2L - 16301741 16301819 3'utr CG5869 FlyBase G8394.1 GGAGTTTTTAGTGATTTTAGTTCTTGCATTTAAGTAATAATCTTAATAGAAGCTGTGCTTGCCAAATTTCTACATGTAT 14 16301760 0.772567062 7 14 130 1 1.342422681 0.181818182 0.428571429 0.636363636 14 0 0 22 2L:16301741-16301819 7 10 232 FBgn0028894 1010.62 123.5733333 189.1366667 0.009894916 0.080923608 0.052871821 -2 -2 -2 0.1 dme-bantam-3p 6mer2-7 GATCTC 2L 16302062 16302067 - 2L_16302062_16302067_- 0.999825413 0.99993947 0.999882442 8.07E-05 CG5869 FBtr0080851 16301654 16302076 2L - 16302032 16302133 stop_codon CG5869 FlyBase G10914.2 GAGATACGCGAACTAGACGAACTCACCGAGGAGTGGCTGAAAGCCAAGCTCAAGTAGAGAGGTTTCGATCTCTGGGATCAATCAATCCGGGCCGTTGTCAAA 92 16302061 0.948172567 10 87 525 0.939130435 1.556302501 0.4 0.239130435 0.391304348 92 5 2 108 2L:16302032-16302133 6 CG5869 FBtr0080851 16301654 16302076 GATCTC 6mer2-7 dme-bantam-3p 2L - 16302028 16302167 stop_codon CG5869 FlyBase G8396.1 TCTTCAGCGCGAAGTAGATCTCACACGCGTCTACGAGATACGCGAACTAGACGAACTCACCGAGGAGTGGCTGAAAGCCAAGCTCAAGTAGAGAGGTTTCGATCTCTGGGATCAATCAATCCGGGCCGTTGTCAAAAGCA 88 16302061 0.97275659 11 85 478 0.96350365 2.120573931 0.284671533 0.409090909 0.620437956 88 5 0 132 2L:16302028-16302167 6 66 233 FBgn0028894 1010.62 123.5733333 189.1366667 0.065306446 0.534095814 0.348954019 -6 -6 -6 0.1 dme-miR-304-5p 7mer-m8 TGAGATT 2L 16305881 16305887 - 2L_16305881_16305887_- 0.620203055 0.620203442 0.620203248 2.12E-07 CG5861 FBtr0080850 16305799 16305958 2L - 16305848 16305907 3'utr CG5861 FlyBase G10918.1 TTTGGTGTTGTCAGAGAAATTGAGATTTTGTAACAAAGACAACAATTACGGTTTAGAGAA 19 16305887 0.826703406 6 18 135 1 1.431363764 0.37037037 0.315789474 0.518518519 19 0 0 27 2L:16305848-16305907 7 CG5861 FBtr0080850 16305799 16305958 TGAGATT 7mer-m8 dme-miR-304-5p 2L - 16305874 16305904 3'utr CG5861 FlyBase G8398.1 GGTGTTGTCAGAGAAATTGAGATTTTGTAAC 5 16305888 0.800498582 2 5 45 1 0.84509804 0.571428571 0.4 0.571428571 5 0 0 7 2L:16305874-16305904 7 9.5 234 FBgn0015338 312.2366667 33.98666667 51.41 0.030425639 0.279521381 0.184788952 0 1 0.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 16309163 16309168 + 2L_16309163_16309168_+ 0.999984012 0.999904644 0.999944328 5.61E-05 Syx5 FBtr0080832|FBtr0080831 16309130|16309130 16309274|16309274 2L + 16309123 16309197 stop_codon Syx5 FlyBase G4760.1 ATGTCGTAATCAAACGCCAGTTGCCCATTAAAAGCCCCATGTACCTATCCATGTATACAGCTTTTTATTTTAATC 22 16309162 0.960240976 6 22 110 1 1.414973348 0 0.181818182 0.307692308 22 0 0 26 2L:16309123-16309197 6 Syx5 FBtr0080832|FBtr0080831 16309130|16309130 16309274|16309274 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 16309136 16309183 3'utr Syx5 FlyBase G3691.1 ACGCCAGTTGCCCATTAAAAGCCCCATGTACCTATCCATGTATACAGC 16 16309162 0.953664802 2 14 60 1 1.278753601 0.052631579 0.266666667 0.421052632 15 0 0 19 2L:16309136-16309183 6 17 235 FBgn0011708 839 57.82 88.43666667 0.020262217 0.294015911 0.19222796 1 1 1 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2L 16309761 16309766 - 2L_16309761_16309766_- 0.999972236 0.999996241 0.999984238 1.70E-05 cni FBtr0080848|FBtr0080849|FBtr0337082 16309594|16309594|16309290 16309902|16309902|16309902 2L - 16309728 16309781 3'utr cni FlyBase G10925.1 ACTTCACTTGTAAATTCTAGTGTAAATCCATAAAGACATCTTGAAGCTTTGTTT 14 16309767 0.986721575 4 14 120 1 1.255272505 0 0.285714286 0.444444444 14 0 0 18 2L:16309728-16309781 6 cni FBtr0080849|FBtr0337082|FBtr0080848 16309594|16309290|16309594 16309902|16309902|16309902 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2L - 16309729 16309776 3'utr cni FlyBase G8401.1 ACTTGTAAATTCTAGTGTAAATCCATAAAGACATCTTGAAGCTTTGTT 12 16309767 0.784609783 4 12 93 1 1.204119983 0 0.333333333 0.5 12 0 0 16 2L:16309729-16309776 6 10.5 236 FBgn0000339 410.67 56.70333333 85.98333333 0.025567974 0.185174299 0.122116689 1 1 1 0.1 dme-bantam-3p 7mer-A1 GATCTCA 2L 16309879 16309885 - 2L_16309879_16309885_- 0.823348199 0.823343712 0.823345955 3.18E-06 cni FBtr0080848|FBtr0080849|FBtr0337082 16309594|16309594|16309290 16309902|16309902|16309902 2L - 16309857 16309924 stop_codon cni FlyBase G10926.1 TTATTCGCTCATCTCGACATAGGCAAGCTCTTGCCTGGGGATCTCAGTGTTGGCGCCAACGCATCAGC 32 16309877 0.98253826 7 29 219 0.891891892 1.51851394 0.081081081 0.15625 0.27027027 32 4 0 33 2L:16309857-16309924 7 cni FBtr0080849|FBtr0337082|FBtr0080848 16309594|16309290|16309594 16309902|16309902|16309902 GATCTCA 7mer-A1 dme-bantam-3p 2L - 16309861 16309919 stop_codon cni FlyBase G8402.1 CGCTCATCTCGACATAGGCAAGCTCTTGCCTGGGGATCTCAGTGTTGGCGCCAACGCAT 33 16309877 0.919761546 5 31 218 0.962962963 1.414973348 0.018518519 0.545454545 0.722222222 33 1 1 52 2L:16309861-16309919 7 28 237 FBgn0000339 410.67 56.70333333 85.98333333 0.068181265 0.493798131 0.325644505 -8 -8 -8 0.1 dme-miR-305-3p 7mer-m8 ATGTGCC 2L 16312998 16313004 + 2L_16312998_16313004_+ 0.674515616 0.674515655 0.674515635 7.07E-08 fzy FBtr0080833 16312826 16313097 2L + 16312976 16313019 3'utr fzy FlyBase G4772.1 AATTACGGATAAATCTCTGATTATGTGCCCCCGCCGACGATATA 7 16312992 0.979340395 4 6 46 0.888888889 0.903089987 0.222222222 0.142857143 0.333333333 7 1 0 8 2L:16312976-16313019 7 fzy FBtr0080833 16312826 16313097 ATGTGCC 7mer-m8 dme-miR-305-3p 2L + 16312969 16313021 3'utr fzy FlyBase G3699.1 ACTTTGTAATTACGGATAAATCTCTGATTATGTGCCCCCGCCGACGATATATG 8 16312994 0.972907743 6 7 45 1 0.954242509 0.333333333 0.125 0.222222222 8 0 0 9 2L:16312969-16313021 7 5.5 238 FBgn0001086 1113.016667 67.49 102.82 0.004941525 0.081493555 0.053491539 6 4 5 0.1 dme-miR-252-5p 7mer-m8 GTACTTA 2L 16313186 16313192 - 2L_16313186_16313192_- 0.588261105 0.58802238 0.588141742 0.000168786 cact FBtr0337081|FBtr0080844|FBtr0080845|FBtr0080847 16313095|16313095|16313034|16313095 16313378|16313378|16313378|16313378 2L - 16313141 16313216 3'utr cact FlyBase G10928.1 TGCATCCAGGAAATGGAACCTTATGTACTTACTGTCCCGGCACGTGGGAATCCGAAACGAATAGAATTCCTTGTGT 120 16313193 0.983688937 6 118 919 0.985815603 2.1430148 0.14893617 0.166666667 0.290780142 120 2 0 139 2L:16313141-16313216 7 cact FBtr0080847|FBtr0337081|FBtr0080844|FBtr0080845 16313095|16313095|16313095|16313034 16313378|16313378|16313378|16313378 GTACTTA 7mer-m8 dme-miR-252-5p 2L - 16313166 16313209 3'utr cact FlyBase G8404.1 AGGAAATGGAACCTTATGTACTTACTGTCCCGGCACGTGGGAAT 68 16313193 0.723457135 4 64 523 0.949494949 1.973127854 0.212121212 0.352941176 0.555555556 68 5 0 94 2L:16313166-16313209 7 92 239 FBgn0000250 1526.01 89.34 137.2866667 0.06028794 1.029773897 0.670130627 1 1 1 0.1 dme-miR-986-5p 6mer3-8 ATTCGA 2L 16342555 16342560 - 2L_16342555_16342560_- 0.989672818 0.984893094 0.987282956 0.003379758 CG42231 FBtr0273183 16342428 16342605 2L - 16342492 16342565 3'utr CG42231 FlyBase G10942.1 ACTTCATTCGATTCCGCTGAACTGCAGTGATTACTCACACTTATTTATACTTGTATCCATTCTTAACTCATCAT 33 16342535 0.978404747 10 32 220 0.931818182 1.612783857 0.25 0.242424242 0.431818182 33 3 0 41 2L:16342492-16342565 6 CG42231 FBtr0273183 16342428 16342605 ATTCGA 6mer3-8 dme-miR-986-5p 2L - 16342517 16342558 3'utr CG42231 FlyBase G8416.1 TCGATTCCGCTGAACTGCAGTGATTACTCACACTTATTTATA 18 16342536 0.652760935 5 17 110 1 1.447158031 0.321428571 0.388888889 0.607142857 18 0 0 28 2L:16342517-16342558 4 8.5 240 FBgn0087041 239.1333333 19.58333333 30.12333333 0.035545024 0.434042553 0.282173288 -25 -24 -24.5 0.1 dme-miR-184-3p 6mer2-7 CCGTCC 2L 16354263 16354268 + 2L_16354263_16354268_+ 0.999999888 0.999999908 0.999999898 0 CG4455 FBtr0080836 16353552 16354539 2L + 16354168 16354436 3'utr CG4455 FlyBase G4781.1 ACGCAACCCAATTTGCATTAAGAATCCGAATCGTACTAACAGACGAACTCTTCGTGATGCCTCGAATTTTGCACTACATTTTAAAACGCCGATTCCCGTCCCTTTATATACACAGGTTGTACTTAAATCGAAACCAAGTACTTAATAATTGTACCATGCCAATCATAGTTTAAGCGCCAATCTGCCGCCACGAATACATTTAAGAAATCTTCAGTTTGTGCATTTAGACCAGCATGAGTATCCTTCTATATATTGTGTCAAAAAAAACG 505 16354260 0.976422367 41 484 3115 0.953895072 1.93305321 0.06200318 0.194059406 0.352941176 505 23 6 600 2L:16354168-16354436 6 CG4455 FBtr0080836 16353552 16354539 CCGTCC 6mer2-7 dme-miR-184-3p 2L + 16354204 16354396 3'utr CG4455 FlyBase G3707.1 TAACAGACGAACTCTTCGTGATGCCTCGAATTTTGCACTACATTTTAAAACGCCGATTCCCGTCCCTTTATATACACAGGTTGTACTTAAATCGAAACCAAGTACTTAATAATTGTACCATGCCAATCATAGTTTAAGCGCCAATCTGCCGCCACGAATACATTTAAGAAATCTTCAGTTTGTGCATTTAGAC 352 16354260 0.914340584 26 330 2000 0.940839695 1.613665673 0.041984733 0.372159091 0.578244275 352 20 11 493 2L:16354204-16354396 6 303.5 241 FBgn0028506 237.38 18.83333333 28.63666667 1.278540736 16.11504425 10.59830055 3 3 3 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2L 16400240 16400245 - 2L_16400240_16400245_- 0.99998281 0.999999939 0.999991374 1.21E-05 CG5888 FBtr0340234|FBtr0080880 16400173|16400173 16400500|16400500 2L - 16400198 16400378 3'utr CG5888 FlyBase G10973.1 CTTAAAATTAATACTCCCATATATGTTCACCTGCTAAGTATCTTTTGAAATATAACACGATTTGTATCTTTAGTGTAAAAGTTTTGAAATAGTTGCTATCATTAAAGACTATAATTTTATGTTTGCTGATTGTAAGACTATAAAATCGAAAAGTTGGAAATATTACTGTATCAATAAACTT 80 16400248 0.988673082 27 74 699 0.91 1.959041392 0.2 0.2 0.36 80 9 0 91 2L:16400198-16400378 6 CG5888 FBtr0340234|FBtr0080880 16400173|16400173 16400500|16400500 AAGACT 6mer3-8 dme-miR-14-3p 2L - 16400220 16400286 3'utr CG5888 FlyBase G8435.1 TTGCTATCATTAAAGACTATAATTTTATGTTTGCTGATTGTAAGACTATAAAATCGAAAAGTTGGAA 20 16400248 0.968553142 7 18 148 0.862068966 1.397940009 0.551724138 0.35 0.551724138 20 4 0 25 2L:16400220-16400286 6 22.5 242 FBgn0028523 337.3833333 21.57333333 32.72 0.06668972 1.042954265 0.687652812 3 3 3 0.1 dme-miR-304-5p 8mer-A1 TGAGATTA 2L 16400411 16400418 - 2L_16400411_16400418_- 0.625363359 0.625363359 0.625363359 0 CG5888 FBtr0340234|FBtr0080880 16400173|16400173 16400500|16400500 2L - 16400395 16400440 3'utr CG5888 FlyBase G10974.1 TAGCTTATTTCTGAGACTATAATGAGATTAAAATAGGCTGAAGCTA 102 16400407 0.811007327 10 90 550 0.889830508 1.176091259 0.355932203 0.12745098 0.245762712 102 7 6 105 2L:16400395-16400440 8 CG5888 FBtr0340234|FBtr0080880 16400173|16400173 16400500|16400500 TGAGATTA 8mer-A1 dme-miR-304-5p 2L - 16400395 16400440 3'utr CG5888 FlyBase G8437.1 TAGCTTATTTCTGAGACTATAATGAGATTAAAATAGGCTGAAGCTA 71 16400407 0.764266672 8 66 350 0.921568627 1.194976603 0.450980392 0.352112676 0.549019608 71 3 5 94 2L:16400395-16400440 8 82.5 243 FBgn0028523 337.3833333 21.57333333 32.72 0.244528973 3.824165637 2.521393643 -11 -11 -11 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 16508867 16508872 - 2L_16508867_16508872_- 0.999999997 1 0.999999999 0 CG5953 FBtr0337091 16508076 16510135 2L - 16508848 16508895 3'utr CG5953 FlyBase G10985.1 AAAAATATATAATATATATCATTGTACCTTATTTTGAAACAGAGATGT 37 16508873 0.93267216 6 35 410 0.957446809 1.352182518 0 0.216216216 0.382978723 37 1 1 45 2L:16508848-16508895 6 CG5953 FBtr0337091 16508076 16510135 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L - 16508845 16508893 3'utr CG5953 FlyBase G8448.1 AAATATATAATATATATCATTGTACCTTATTTTGAAACAGAGATGTTTT 18 16508873 0.696121129 3 18 203 1 1.380211242 0 0.277777778 0.458333333 18 0 0 24 2L:16508845-16508893 6 27 244 FBgn0032587 1367.886667 37.83 57.85 0.019738477 0.71371927 0.466724287 1 1 1 0.1 dme-miR-8-3p 8mer-A1 CAGTATTA 2L 16509284 16509291 - 2L_16509284_16509291_- 0.67169653 0.671697288 0.671696909 5.66E-07 CG5953 FBtr0337091|FBtr0301144|FBtr0080874|FBtr0080873 16508076|16509118|16509118|16509118 16510135|16510135|16510135|16510135 2L - 16509203 16509310 3'utr CG5953 FlyBase G10987.1 CGTCTAACTAGCAGAATCTCAGTATTAACTATAAAATACACTTTACATAGGGATCCAAGCATTTGCCATAGATCGTTTCCTTTGGGGCCCGATCGTCCACTTCTGGGT 29 16509292 0.986117033 8 24 210 0.833333333 1.397940009 0.2 0.034482759 0.066666667 29 5 0 25 2L:16509203-16509310 8 CG5953 FBtr0080874|FBtr0080873|FBtr0337091|FBtr0301144 16509118|16509118|16508076|16509118 16510135|16510135|16510135|16510135 CAGTATTA 8mer-A1 dme-miR-8-3p 2L - 16509272 16509313 3'utr CG5953 FlyBase G8451.1 AGACGTCTAACTAGCAGAATCTCAGTATTAACTATAAAATAC 20 16509292 0.781826373 4 19 127 0.961538462 1.397940009 0.153846154 0.25 0.423076923 20 1 0 25 2L:16509272-16509313 8 18 245 FBgn0032587 1367.886667 37.83 57.85 0.013158985 0.475812847 0.311149525 1 1 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2L 16509468 16509474 - 2L_16509468_16509474_- 0.671660174 0.668646937 0.670153556 0.002130725 CG5953 FBtr0337091|FBtr0301144|FBtr0080874|FBtr0080873 16508076|16509118|16509118|16509118 16510135|16510135|16510135|16510135 2L - 16509440 16509503 3'utr CG5953 FlyBase G10988.2 AAACACAAAAACCACAATATAGAACACAAACCAAAGTTACTTTCTATTCTGTTCGAAGGGCTGC 51 16509467 0.972894093 4 48 267 0.983333333 1.770852012 0.033333333 0.156862745 0.283333333 51 1 0 59 2L:16509440-16509503 7 CG5953 FBtr0080874|FBtr0080873|FBtr0337091|FBtr0301144 16509118|16509118|16508076|16509118 16510135|16510135|16510135|16510135 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 16509446 16509496 3'utr CG5953 FlyBase G8452.3 AAAACCACAATATAGAACACAAACCAAAGTTACTTTCTATTCTGTTCGAAG 37 16509467 0.908297506 3 35 147 0.981818182 1.73239376 0.054545455 0.324324324 0.545454545 37 1 0 54 2L:16509446-16509496 7 40 246 FBgn0032587 1367.886667 37.83 57.85 0.029242189 1.057361882 0.691443388 -7 -7 -7 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 2L 16509900 16509906 - 2L_16509900_16509906_- 0.782896773 0.782908035 0.782902404 7.92E-06 CG5953 FBtr0337091|FBtr0301144|FBtr0080874|FBtr0080873 16508076|16509118|16509118|16509118 16510135|16510135|16510135|16510135 2L - 16509865 16510035 3'utr CG5953 FlyBase G10990.1 GGAGCCTTCTCGCCCCGCAGCATGGCAAGTGAATTCCATTTGATGAAATAGTCGACAGAGAGTAGTAGGCAAATACAGAGAACACAGTACAACTTATTTTTAGTTTGGCCAGGATCGGGGTCACCACTTGTACAAAGCTTGGCTTGAACGGGGGCAGTGTTACTTAGCCGG 95 16509908 0.970790249 16 86 518 0.880733945 1.681241237 0.330275229 0.126315789 0.23853211 95 12 1 96 2L:16509865-16510035 7 CG5953 FBtr0080874|FBtr0080873|FBtr0337091|FBtr0301144 16509118|16509118|16508076|16509118 16510135|16510135|16510135|16510135 GTACAAA 7mer-A1 dme-miR-305-5p 2L - 16509860 16510034 3'utr CG5953 FlyBase G8456.1 GAGCCTTCTCGCCCCGCAGCATGGCAAGTGAATTCCATTTGATGAAATAGTCGACAGAGAGTAGTAGGCAAATACAGAGAACACAGTACAACTTATTTTTAGTTTGGCCAGGATCGGGGTCACCACTTGTACAAAGCTTGGCTTGAACGGGGGCAGTGTTACTTAGCCGGAAAGA 66 16509908 0.972483331 18 59 356 0.899082569 1.991226076 0.330275229 0.46969697 0.678899083 66 11 0 98 2L:16509860-16510034 7 45.5 247 FBgn0032587 1367.886667 37.83 57.85 0.03326299 1.202749141 0.786516854 2 2 2 0.1 dme-miR-2a-2-5p 7mer-A1 GATGAGA 2L 16662062 16662068 + 2L_16662062_16662068_+ 0.782294339 0.782297236 0.782295787 2.05E-06 CG42389 FBtr0335497 16661777 16663218 2L + 16662039 16662083 3'utr CG42389 FlyBase G4872.1 GGAAAGTGGAATAGAGAAGGAGAGATGAGAAGGCAAAACCCCATT 18 16662064 0.713627686 3 16 11 0.818181818 1.255272505 0.045454545 0.166666667 0.318181818 18 4 0 18 2L:16662039-16662083 7 CG42389 FBtr0335497 16661777 16663218 GATGAGA 7mer-A1 dme-miR-2a-2-5p 2L + 16662023 16662083 3'utr CG42389 FlyBase G3795.1 AAAAAAAAAATGGAATGGAAAGTGGAATAGAGAAGGAGAGATGAGAAGGCAAAACCCCATT 17 16662064 0.936852329 4 17 26 1 1.505149978 0.3125 0.529411765 0.75 17 0 0 32 2L:16662023-16662083 7 15.5 248 FBgn0259735 3930.076667 62.35333333 96.36 0.003943943 0.248583342 0.160855127 -2 -2 -2 0.1 dme-miR-965-3p 6mer2-7 ACGCTT 2L 16662724 16662729 + 2L_16662724_16662729_+ 0.506946282 0.681324301 0.594135291 0.123303866 CG42389 FBtr0335497 16661777 16663218 2L + 16662710 16662741 3'utr CG42389 FlyBase G4879.1 ATGTAAAACAGCAGACGCTTCTTTCATTCTCA 20 16662731 0.620196093 2 20 110 1 1.397940009 0 0.2 0.36 20 0 0 25 2L:16662710-16662741 6 CG42389 FBtr0335497 16661777 16663218 ACGCTT 6mer2-7 dme-miR-965-3p 2L + 16662710 16662743 3'utr CG42389 FlyBase G3798.1 ATGTAAAACAGCAGACGCTTCTTTCATTCTCACA 19 16662731 0.656739165 4 19 105 1 1.491361694 0 0.421052632 0.64516129 19 0 0 31 2L:16662710-16662743 6 19.5 249 FBgn0259735 3930.076667 62.35333333 96.36 0.004961735 0.312733882 0.202366127 -7 -7 -7 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 2L 16662861 16662867 + 2L_16662861_16662867_+ 0.620204227 0.620200085 0.620202156 2.90E-06 CG42389 FBtr0335497 16661777 16663218 2L + 16662828 16662873 3'utr CG42389 FlyBase G4880.1 GGGGGCTGCTATATTCGCTGGCAATCCAACTGTTGCATTTCACAAC 10 16662860 0.689674502 5 9 59 0.923076923 1.079181246 0.307692308 0.3 0.461538462 10 1 0 12 2L:16662828-16662873 7 CG42389 FBtr0335497 16661777 16663218 TGCATTT 7mer-m8 dme-miR-277-3p 2L + 16662817 16662877 3'utr CG42389 FlyBase G3799.1 GCAACCCCAGTGGGGGCTGCTATATTCGCTGGCAATCCAACTGTTGCATTTCACAACCAAC 10 16662841 0.873268497 4 8 55 0.846153846 1.041392685 0.307692308 0.3 0.461538462 10 2 0 11 2L:16662817-16662877 7 5.5 250 FBgn0259735 3930.076667 62.35333333 96.36 0.001399464 0.088206992 0.057077626 1 20 10.5 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 16663038 16663043 + 2L_16663038_16663043_+ 0.482662276 0.776229961 0.629446118 0.207583711 CG42389 FBtr0335497 16661777 16663218 2L + 16663009 16663078 3'utr CG42389 FlyBase G4882.1 AATGTAATTGTTTCTTTCCATAGCATTTAATGTGAATTATACAAAACGGATTCTTATCTAAAAAACCAAG 32 16663021 0.860041263 9 30 305 0.947368421 1.255272505 0.289473684 0.125 0.263157895 32 1 1 36 2L:16663009-16663078 6 CG42389 FBtr0335497 16661777 16663218 ATGTGA 6mer3-8 dme-miR-1003-3p 2L + 16663014 16663075 3'utr CG42389 FlyBase G3801.1 AATTGTTTCTTTCCATAGCATTTAATGTGAATTATACAAAACGGATTCTTATCTAAAAAACC 15 16663020 0.874298366 8 15 127 1 1.342422681 0.045454545 0.4 0.590909091 15 0 0 22 2L:16663014-16663075 6 13.5 251 FBgn0259735 3930.076667 62.35333333 96.36 0.003435047 0.216508072 0.140099626 17 18 17.5 0.1 dme-miR-283-5p 6mer3-8 TGATAT 2L 16681598 16681603 + 2L_16681598_16681603_+ 0.996690807 0.99633285 0.996511828 0.000253144 squ FBtr0335140|FBtr0305565|FBtr0080887 16681443|16681443|16681443 16681653|16681653|16681653 2L + 16681583 16681620 3'utr squ FlyBase G4898.1 AGAAAGAAAAATACTTGATATCATAGGGTAAACAAAAT 107 16681597 0.697261625 5 105 636 0.975206612 1.594760753 0.024793388 0.112149533 0.214876033 107 1 2 118 2L:16681583-16681620 6 squ FBtr0080887|FBtr0335140|FBtr0305565 16681443|16681443|16681443 16681653|16681653|16681653 TGATAT 6mer3-8 dme-miR-283-5p 2L + 16681536 16681625 3'utr squ FlyBase G3815.1 AACGTCGTTTAGAAAACCGAATTTATATTGGATGCAGTTCTACAAATAGAAAGAAAAATACTTGATATCATAGGGTAAACAAAATATTTA 86 16681597 0.975047993 6 85 537 0.991071429 2.045322979 0.089285714 0.197674419 0.383928571 86 1 0 111 2L:16681536-16681625 6 93.5 252 FBgn0267347 773.79 92.38333333 140.8866667 0.120833818 1.012087317 0.663654001 1 1 1 0.1 dme-miR-305-3p 6mer3-8 ATGTGC 2L 16699762 16699767 + 2L_16699762_16699767_+ 1 0.999999985 0.999999992 0 grp FBtr0080886|FBtr0100459|FBtr0080884|FBtr0339514|FBtr0080885 16699640|16699640|16699640|16699640|16699640 16699926|16699926|16699926|16699926|16699926 2L + 16699750 16699773 3'utr grp FlyBase G4915.1 CTAAAATTCTCAATGTGCTAACTT 5 16699757 0.769838117 2 4 37 0.8 0.602059991 0 0 0 5 1 0 4 2L:16699750-16699773 6 grp FBtr0080885|FBtr0080884|FBtr0339514|FBtr0080886|FBtr0100459 16699640|16699640|16699640|16699640|16699640 16699926|16699926|16699926|16699926|16699926 ATGTGC 6mer3-8 dme-miR-305-3p 2L + 16699751 16699786 3'utr grp FlyBase G3833.1 TAAAATTCTCAATGTGCTAACTTATTTTTAATTCAT 10 16699763 0.746083946 4 8 100 0.785714286 1.041392685 0 0.2 0.428571429 10 3 0 11 2L:16699751-16699786 6 7.5 253 FBgn0261278 1105.166667 59.92666667 91.90666667 0.006786307 0.125152965 0.081604526 5 -1 2 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 16705113 16705118 - 2L_16705113_16705118_- 0.999379852 0.9992754 0.999327626 7.39E-05 CG31808 FBtr0303445 16704284 16705521 2L - 16705095 16705140 3'utr CG31808 FlyBase G11015.1 AACGGAATTTCTCGCGCCTTTCGTACCTTTTGTATTGTAATAAGTC 23 16705111 0.707252985 6 21 227 0.903225806 1.447158031 0.064516129 0.304347826 0.483870968 23 3 0 28 2L:16705095-16705140 6 CG31808 FBtr0303445 16704284 16705521 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L - 16705099 16705140 3'utr CG31808 FlyBase G8474.1 AACGGAATTTCTCGCGCCTTTCGTACCTTTTGTATTGTAATA 13 16705111 0.701802266 3 13 126 1 1.342422681 0.090909091 0.461538462 0.681818182 13 0 0 22 2L:16705099-16705140 6 17 254 FBgn0062978 13.66666667 0.833333333 1.236666667 1.243902439 20.4 13.74663073 -7 -7 -7 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC 2L 16723429 16723435 - 2L_16723429_16723435_- 0.661615645 0.661615645 0.661615645 0 VhaSFD FBtr0080942|FBtr0335143|FBtr0080941|FBtr0080940 16723230|16722881|16723230|16723230 16723992|16723818|16723818|16723818 2L - 16723356 16723576 3'utr VhaSFD FlyBase G11016.1 AAGTATTGAGAGAAAAATTCGATTTTTTGTTGGCATTCCAAAAAGCAATTCACTGTAATGGCAGAACAAATACAAGCAACTATCCTCTACAAATTGTTCCATTCAATTCGATTGTTTATATATTTTGTTGTTATTATTATTTGTGTTCTTAATTTTATGAGTGCGCCGCTGTACAGAGTTTTTCTAAACCAGATGATATGCGCTTCTTACGTTTATATAGT 35 16723436 0.991898932 15 34 375 0.953488372 1.612783857 0.209302326 0.171428571 0.325581395 35 2 0 41 2L:16723356-16723576 7 VhaSFD FBtr0080941|FBtr0080940|FBtr0080942|FBtr0335143 16723230|16723230|16723230|16722881 16723818|16723818|16723992|16723818 TGTGTTC 7mer-m8 dme-miR-317-3p 2L - 16723415 16723455 3'utr VhaSFD FlyBase G8476.1 ATTTTGTTGTTATTATTATTTGTGTTCTTAATTTTATGAGT 15 16723436 0.803846157 2 11 209 0.740740741 1.301029996 0.222222222 0.428571429 0.703703704 14 7 0 20 2L:16723415-16723455 7 15 255 FBgn0027779 484.9333333 25.11333333 38.29666667 0.030932087 0.597292275 0.391678997 1 1 1 0.1 dme-miR-988-3p 6mer3-8 ACAAGG 2L 16723847 16723852 - 2L_16723847_16723852_- 0.920672996 0.946612172 0.933642584 0.018341784 VhaSFD FBtr0080942 16723230 16723992 2L - 16723781 16723856 stop_codon VhaSFD FlyBase G11019.1 AGAAACAAGGTGCCGCCCCCATCGCTGGCAAGGCCTAGGTGGTCTAATCAACAAGTCATCCATGCACAGGCACACA 11 16723846 0.999198389 6 10 24 0.916666667 1.041392685 0.083333333 0.090909091 0.166666667 11 1 0 11 2L:16723781-16723856 6 VhaSFD FBtr0080942 16723230 16723992 ACAAGG 6mer3-8 dme-miR-988-3p 2L - 16723811 16723879 stop_codon VhaSFD FlyBase G8479.1 GCTGGAGAAGGAAAACGAGAACCAGAAACAAGGTGCCGCCCCCATCGCTGGCAAGGCCTAGGTGGTCTA 5 16723846 0.784122908 3 5 9 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 2L:16723811-16723879 6 3.5 256 FBgn0027779 484.9333333 25.11333333 38.29666667 0.007217487 0.139368198 0.091391766 -6 -6 -6 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 2L 16730963 16730968 + 2L_16730963_16730968_+ 0.999912485 0.999814656 0.999863571 6.92E-05 CG31812 FBtr0290062 16730532 16731199 2L + 16730914 16730974 3'utr CG31812 FlyBase G4920.1 CCATGGGGATTGTGGGGATCCACGGCTGGCTGTTGTTCAAGGCTCATATTGTGTTAAAAAT 9 16730962 0.985866227 4 9 74 1 1 0 0.111111111 0.2 9 0 0 10 2L:16730914-16730974 6 CG31812 FBtr0290062 16730532 16731199 TGTGTT 6mer3-8 dme-miR-317-3p 2L + 16730900 16730975 3'utr CG31812 FlyBase G3837.1 AGGACTCACCCAGTCCATGGGGATTGTGGGGATCCACGGCTGGCTGTTGTTCAAGGCTCATATTGTGTTAAAAATA 8 16730962 0.985180342 3 8 61 1 1.204119983 0.25 0.5 0.75 8 0 0 16 2L:16730900-16730975 6 5.5 257 FBgn0051812 34.62 3.073333333 4.633333333 0.158867707 1.789587852 1.18705036 1 1 1 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2L 16746943 16746948 + 2L_16746943_16746948_+ 0.999999642 0.999996524 0.999998083 2.19E-06 CG17912 FBtr0343767 16746627 16748781 2L + 16746918 16746956 3'utr CG17912 FlyBase G4935.1 ATGGTTAACCGAAACGCACACTCATAAGACTAATCTGAA 13 16746942 0.941258907 4 12 50 0.928571429 1.113943352 0.214285714 0.076923077 0.142857143 13 1 0 13 2L:16746918-16746956 6 CG17912 FBtr0343767 16746627 16748781 AAGACT 6mer3-8 dme-miR-14-3p 2L + 16746929 16746955 3'utr CG17912 FlyBase G3849.1 AAACGCACACTCATAAGACTAATCTGA 15 16746941 0.744566897 3 12 60 0.85 0.929418926 0.35 0.333333333 0.5 15 2 1 17 2L:16746929-16746955 6 14 258 FBgn0032600 1948.576667 105.4366667 161.06 0.007184731 0.132781132 0.086924128 1 2 1.5 0.1 dme-miR-318-3p 6mer3-8 CCCAGT 2L 16821224 16821229 - 2L_16821224_16821229_- 0.999730985 0.999998454 0.99986472 0.000189151 Cas FBtr0080930 16821154 16821323 2L - 16821183 16821249 3'utr Cas FlyBase G11060.1 ACTCGATCACTCATTGCATGCCCAGTTTATTGTCATTTAAAAATTGTATCTAATATATGTAAGTTTT 16 16821205 0.788820971 8 16 142 1 1.301029996 0 0.1875 0.35 16 0 0 20 2L:16821183-16821249 6 Cas FBtr0080930 16821154 16821323 CCCAGT 6mer3-8 dme-miR-318-3p 2L - 16821185 16821227 3'utr Cas FlyBase G8512.1 CAGTTTATTGTCATTTAAAAATTGTATCTAATATATGTAAGTT 5 16821222 0.992682591 3 3 46 0.857142857 0.77815125 0.142857143 0.2 0.428571429 5 1 0 6 2L:16821185-16821227 4 4.5 259 FBgn0022213 1584.566667 59.12 90.5 0.002839893 0.076116373 0.049723757 -24 -7 -15.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2L 16835168 16835174 - 2L_16835168_16835174_- 0.823349562 0.823349562 0.823349562 0 CG13283 FBtr0080928 16835134 16835259 2L - 16835142 16835202 3'utr CG13283 FlyBase G11085.1 AAAAAATAAAATGTATTGTTATATTTACCTAGTCATTGGAAATATACTTGTTATCAACATT 15 16835181 0.989186626 8 15 142 1 1.230448921 0.058823529 0.133333333 0.235294118 15 0 0 17 2L:16835142-16835202 7 CG13283 FBtr0080928 16835134 16835259 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 16835160 16835190 3'utr CG13283 FlyBase G8531.1 GTATTGTTATATTTACCTAGTCATTGGAAAT 9 16835179 0.623950934 5 9 86 1 1.041392685 0.545454545 0.111111111 0.272727273 9 0 0 11 2L:16835160-16835190 7 10.5 260 FBgn0032613 497 28.40666667 43.38333333 0.021126761 0.369631542 0.242028429 7 5 6 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 2L 16886094 16886100 + 2L_16886094_16886100_+ 0.521223855 0.521223855 0.521223855 0 CG31743 FBtr0080947|FBtr0340171 16886024|16886024 16886319|16886319 2L + 16885959 16886149 stop_codon CG31743 FlyBase G4977.1 ATATGAGGATGACTTTCGACTCTTTGACTACGCACTGGACGAGGTACTCGGCTTTGAGTTTGGCTAATTGTGAATGAAAAGCTGCTCTCTCAATATCCCCAAGTCACCACCATAACGCTTTCCACTGGAAAAGATTGTGATTTTAGGCTAGGACTTGTAGATTTAGGTGCACTCCCATGCGAATATTATTT 581 16886093 0.933615634 31 559 4781 0.963358779 1.896939372 0.116030534 0.111876076 0.21221374 581 17 7 631 2L:16885959-16886149 7 CG31743 FBtr0340171|FBtr0080947 16886024|16886024 16886319|16886319 TGTGATT 7mer-m1 dme-miR-308-3p 2L + 16885957 16886139 stop_codon CG31743 FlyBase G3873.1 ATATATGAGGATGACTTTCGACTCTTTGACTACGCACTGGACGAGGTACTCGGCTTTGAGTTTGGCTAATTGTGAATGAAAAGCTGCTCTCTCAATATCCCCAAGTCACCACCATAACGCTTTCCACTGGAAAAGATTGTGATTTTAGGCTAGGACTTGTAGATTTAGGTGCACTCCCATGCG 388 16886093 0.986406284 31 366 3119 0.933913043 1.775731776 0.114782609 0.360824742 0.568695652 388 30 8 537 2L:16885957-16886139 7 411 261 FBgn0032618 47.81666667 2.756666667 4.25 8.595329383 149.0931076 96.70588235 1 1 1 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 2L 16886197 16886202 + 2L_16886197_16886202_+ 0.637305697 0.573045168 0.605175432 0.045439035 CG31743 FBtr0080947|FBtr0340171 16886024|16886024 16886319|16886319 2L + 16886177 16886224 3'utr CG31743 FlyBase G4978.1 ACAAATGTTTCCAAGGGTTTTTGACTGTAAAACTTAGTTATAATCATT 104 16886197 0.708366811 9 94 983 0.898305085 1.72427587 0.008474576 0.125 0.228813559 104 11 1 106 2L:16886177-16886224 6 CG31743 FBtr0340171|FBtr0080947 16886024|16886024 16886319|16886319 TTGACT 6mer3-8 dme-miR-1012-3p 2L + 16886146 16886224 3'utr CG31743 FlyBase G3874.1 ATTTTTGTTCTGTATACATACCTTCCCGCGCACAAATGTTTCCAAGGGTTTTTGACTGTAAAACTTAGTTATAATCATT 89 16886197 0.671865876 12 75 777 0.854700855 1.15490196 0.034188034 0.280898876 0.452991453 89 11 6 100 2L:16886146-16886224 6 84 262 FBgn0032618 47.81666667 2.756666667 4.25 1.756709655 30.47158404 19.76470588 0 0 0 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG 2L 16887381 16887386 - 2L_16887381_16887386_- 0.999901111 0.99991327 0.99990719 8.63E-06 CG6115 FBtr0345447|FBtr0080959 16887107|16887123 16887461|16887461 2L - 16887358 16887417 3'utr CG6115 FlyBase G11093.1 CGGAAATCGCTGCAAAAACTCAAGGACTGATGCTGTGGATCGGGGGGAGCACGAAGAAGG 320 16887387 0.953226922 7 316 1427 0.983651226 2.256477206 0.049046322 0.125 0.237057221 320 5 1 361 2L:16887358-16887417 6 CG6115 FBtr0345447|FBtr0080959 16887107|16887123 16887461|16887461 GCTGTG 6mer2-7 dme-miR-1008-3p 2L - 16887301 16887444 3'utr CG6115 FlyBase G8535.1 CGGCGGGCGGGAGGCGTGGCAGCGATGCGGAAATCGCTGCAAAAACTCAAGGACTGATGCTGTGGATCGGGGGGAGCACGAAGAAGGAGGTGTAGAAAGAATCATGAGAATATGATACGTTTCGCCTTGCTTGTCGCACACAAA 212 16887387 0.971968762 11 208 891 0.978527607 2.503790683 0.079754601 0.386792453 0.601226994 212 7 0 319 2L:16887301-16887444 6 260.5 263 FBgn0040985 1485.056667 264.5733333 406.8133333 0.175414182 0.984604143 0.640342827 1 1 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 2L 16916602 16916607 + 2L_16916602_16916607_+ 0.999771666 0.999347325 0.999559495 0.000300096 tweek FBtr0304930|FBtr0304927|FBtr0304929|FBtr0340173|FBtr0304928|FBtr0340172 16916563|16916563|16916563|16916563|16916563|16916563 16917052|16917052|16917052|16917052|16917052|16917052 2L + 16916550 16916630 stop_codon tweek FlyBase G5006.1 CCCCCAACGAATTAGCCATGGCAGAGTAGCATCTATGACAGTTGACAATTACCCAAAGTCCTTCGATTTAGTCTAAGTAGC 21 16916617 0.930556028 11 18 129 0.807692308 1.322219295 0.307692308 0.142857143 0.307692308 21 5 0 21 2L:16916550-16916630 6 tweek FBtr0340172|FBtr0304928|FBtr0340173|FBtr0304929|FBtr0304927|FBtr0304930 16916563|16916563|16916563|16916563|16916563|16916563 16917052|16917052|16917052|16917052|16917052|16917052 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 2L + 16916591 16916633 3'utr tweek FlyBase G3895.1 TTGACAATTACCCAAAGTCCTTCGATTTAGTCTAAGTAGCGAT 11 16916617 0.6697694 7 11 84 1 1.230448921 0.117647059 0.272727273 0.529411765 11 0 0 17 2L:16916591-16916633 6 9 264 FBgn0261671 3032.533333 22.31666667 34.24333333 0.002967816 0.403286034 0.262824881 -15 -15 -15 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 16916732 16916738 + 2L_16916732_16916738_+ 0.658825899 0.658799669 0.658812784 1.85E-05 tweek FBtr0304930|FBtr0304927|FBtr0304929|FBtr0340173|FBtr0304928|FBtr0340172 16916563|16916563|16916563|16916563|16916563|16916563 16917052|16917052|16917052|16917052|16917052|16917052 2L + 16916659 16916803 3'utr tweek FlyBase G5007.1 TTTTTATTATTTATTACCCTGGTTGACCTAGCATGCTTTAAGATTGAAACTGGCGGTATTATGTGGCCAGTATGGCAGCTTCATATATAATGTAAATGGTTTGCTCTCGTTCCCCTTCTTTTTAAGCGTATCTGTATACTCTTTC 349 16916731 0.863210858 24 343 2201 0.986516854 2.341434525 0.042696629 0.220630372 0.388764045 349 5 1 439 2L:16916659-16916803 7 tweek FBtr0340172|FBtr0304928|FBtr0340173|FBtr0304929|FBtr0304927|FBtr0304930 16916563|16916563|16916563|16916563|16916563|16916563 16917052|16917052|16917052|16917052|16917052|16917052 GGCAGCT 7mer-m8 dme-miR-980-3p 2L + 16916656 16916756 3'utr tweek FlyBase G3896.1 AAGTTTTTATTATTTATTACCCTGGTTGACCTAGCATGCTTTAAGATTGAAACTGGCGGTATTATGTGGCCAGTATGGCAGCTTCATATATAATGTAAATG 220 16916731 0.974763009 16 208 1257 0.979228487 2.51851394 0.059347181 0.406392694 0.614243323 219 7 0 330 2L:16916656-16916756 7 254 265 FBgn0261671 3032.533333 22.31666667 34.24333333 0.083758354 11.38162808 7.41750219 1 1 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2L 1696897 1696903 + 2L_1696897_1696903_+ 0.823349552 0.823349322 0.823349437 2.12E-07 chinmo FBtr0303933|FBtr0077878|FBtr0303934|FBtr0307047|FBtr0077877|FBtr0303935 1696856|1696148|1696856|1696148|1696148|1696148 1698617|1697837|1698617|1704682|1698617|1698617 2L + 1696831 1697056 stop_codon chinmo FlyBase G1044.2 ACGCCCAAGGTCAATGTGGAGCAATAGGATGAGGAGAAACGAGGAGATGCCCCCAGAGGATGCCCCCCAAAGAAGCTGCTTAGATTTAGGCTAAGAATCGATGAAACGACGGAGTGAAAGATAGACGAGTGATTTACGCGCGCGCAAAGAAGATGAAACATGACTACTGATGCAACTGCTGTTGCCCTCGGAGACCACCTACGACCAAGCTGGACAAGAAGCCCCA 130 1696891 0.99997418 23 124 515 0.95862069 1.841984805 0.296551724 0.069230769 0.165517241 130 5 1 139 2L:1696831-1697056 7 chinmo FBtr0077877|FBtr0303935|FBtr0303934|FBtr0307047|FBtr0303933|FBtr0077878 1696148|1696148|1696856|1696148|1696856|1696148 1698617|1698617|1698617|1704682|1698617|1697837 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2L + 1696854 1697016 stop_codon chinmo FlyBase G824.1 ATAGGATGAGGAGAAACGAGGAGATGCCCCCAGAGGATGCCCCCCAAAGAAGCTGCTTAGATTTAGGCTAAGAATCGATGAAACGACGGAGTGAAAGATAGACGAGTGATTTACGCGCGCGCAAAGAAGATGAAACATGACTACTGATGCAACTGCTGTTGCC 86 1696891 0.981443073 19 84 368 0.984 2.089905111 0.264 0.290697674 0.512 86 2 0 123 2L:1696854-1697016 7 40 266 FBgn0086758 5795.003333 67.42333333 103.87 0.006902498 0.593266426 0.385096756 6 6 6 0.1 dme-miR-184-5p 8mer-A1 TGATAAGA 2L 1697109 1697116 + 2L_1697109_1697116_+ 0.601217767 0.576519897 0.588868832 0.017464053 chinmo FBtr0303933|FBtr0077878|FBtr0303934|FBtr0307047|FBtr0077877|FBtr0303935 1696856|1696148|1696856|1696148|1696148|1696148 1698617|1697837|1698617|1704682|1698617|1698617 2L + 1697090 1697126 3'utr chinmo FlyBase G1045.1 AAGGAAACAAGGAACCTAATGATAAGATGTACCACAC 8 1697108 0.916825403 3 7 22 0.9 0.954242509 0.3 0.125 0.3 8 1 0 9 2L:1697090-1697126 8 chinmo FBtr0077877|FBtr0303935|FBtr0303934|FBtr0307047|FBtr0303933|FBtr0077878 1696148|1696148|1696856|1696148|1696856|1696148 1698617|1698617|1698617|1704682|1698617|1697837 TGATAAGA 8mer-A1 dme-miR-184-5p 2L + 1697090 1697140 3'utr chinmo FlyBase G825.2 AAGGAAACAAGGAACCTAATGATAAGATGTACCACACACGTGCACGTGTGC 5 1697117 0.934169996 2 4 16 0.666666667 0.77815125 0 0.4 0.666666667 5 3 0 6 2L:1697090-1697140 8 6 267 FBgn0086758 5795.003333 67.42333333 103.87 0.001035375 0.088989964 0.057764513 1 -8 -3.5 0.1 dme-miR-8-3p 6mer3-8 CAGTAT 2L 1697332 1697337 + 2L_1697332_1697337_+ 0.999849923 0.999684252 0.999767087 0.000117097 chinmo FBtr0303933|FBtr0077878|FBtr0303934|FBtr0307047|FBtr0077877|FBtr0303935 1696856|1696148|1696856|1696148|1696148|1696148 1698617|1697837|1698617|1704682|1698617|1698617 2L + 1697312 1697342 3'utr chinmo FlyBase G1046.1 CAAACCAAACCAATTAATGGCAGTATGAAAC 5 1697328 0.951202363 2 4 18 0.833333333 0.698970004 0 0.2 0.333333333 5 1 0 5 2L:1697312-1697342 6 chinmo FBtr0077877|FBtr0303935|FBtr0303934|FBtr0307047|FBtr0303933|FBtr0077878 1696148|1696148|1696856|1696148|1696856|1696148 1698617|1698617|1698617|1704682|1698617|1697837 CAGTAT 6mer3-8 dme-miR-8-3p 2L + 1697314 1697352 3'utr chinmo FlyBase G826.1 AACCAAACCAATTAATGGCAGTATGAAACAGGACACTCA 6 1697329 0.87736228 3 6 23 1 0.954242509 0 0.5 0.666666667 6 0 0 9 2L:1697314-1697352 6 5.5 268 FBgn0086758 5795.003333 67.42333333 103.87 0.000949094 0.081574134 0.052950804 4 3 3.5 0.1 dme-miR-92b-3p 6mer2-7 TGCAAT 2L 1698806 1698811 + 2L_1698806_1698811_+ 0.687200736 0.911327502 0.799264119 0.15848158 chinmo FBtr0307047 1696148 1704682 2L + 1698791 1698857 3'utr chinmo FlyBase G1051.1 ATCTAAGATCCAAAATGCAATGGAAAATATTGAGAAAATCTGCCAAGGCTAGCAAGTTCTTGGCCTG 11 1698806 0.963622621 7 10 54 0.923076923 1.079181246 0.384615385 0.181818182 0.307692308 11 1 0 12 2L:1698791-1698857 6 chinmo FBtr0307047 1696148 1704682 TGCAAT 6mer2-7 dme-miR-92b-3p 2L + 1698790 1698858 3'utr chinmo FlyBase G830.1 AATCTAAGATCCAAAATGCAATGGAAAATATTGAGAAAATCTGCCAAGGCTAGCAAGTTCTTGGCCTGT 8 1698808 0.935412167 6 8 32 1 1.255272505 0.277777778 0.625 0.833333333 8 0 0 18 2L:1698790-1698858 6 5.5 269 FBgn0086758 5795.003333 67.42333333 103.87 0.000949094 0.081574134 0.052950804 0 -2 -1 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2L 1698964 1698969 + 2L_1698964_1698969_+ 0.999965487 0.999842594 0.999904041 8.69E-05 chinmo FBtr0307047 1696148 1704682 2L + 1698894 1699064 3'utr chinmo FlyBase G1052.1 ATCGATAGCATGTGTGTATGCGTGGCCTCAGTTGTATAATGATAGAACCTAGATATAATATGTATTCGTATACCTGTAAACCTATACCTAAAAACTACTAAGCGCATATGTAGGAACACACTAGGCTCGCCAACGGAGAGGAGAGGAGAGAAGAGTTGAGATGGGTTTTAT 176 1698962 0.932441431 19 170 1206 0.965346535 2.290034611 0.069306931 0.142045455 0.252475248 176 7 0 195 2L:1698894-1699064 6 chinmo FBtr0307047 1696148 1704682 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2L + 1698868 1698985 3'utr chinmo FlyBase G831.1 TATTATTACTATTAACGCATATATATATCGATAGCATGTGTGTATGCGTGGCCTCAGTTGTATAATGATAGAACCTAGATATAATATGTATTCGTATACCTGTAAACCTATACCTAAA 50 1698962 0.973409926 13 49 390 0.986666667 1.568201724 0.013333333 0.32 0.546666667 50 0 1 74 2L:1698868-1698985 6 68.5 270 FBgn0086758 5795.003333 67.42333333 103.87 0.011820528 1.015968755 0.659478194 2 2 2 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 1699298 1699305 + 2L_1699298_1699305_+ 0.650145746 0.650110245 0.650127995 2.51E-05 chinmo FBtr0307047|FBtr0307047|FBtr0307047 1696148|1696148|1696148 1704682|1704682|1704682 2L + 1699255 1699336 3'utr chinmo FlyBase G1054.1 ATGCAGATGCAGACTACCAGTGTCACCCGATCCCCAGTTTGTTCTGTGATATCGTTTTCAAGTTGCAAGAACGAGTGGCGTT 87 1699296 0.989004859 13 76 838 0.834951456 1.457377197 0.223300971 0.149425287 0.281553398 87 15 2 86 2L:1699255-1699336 8 chinmo FBtr0307047|FBtr0307047|FBtr0307047 1696148|1696148|1696148 1704682|1704682|1704682 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 1699242 1699322 3'utr chinmo FlyBase G832.1 CTAACCATAGAAGATGCAGATGCAGACTACCAGTGTCACCCGATCCCCAGTTTGTTCTGTGATATCGTTTTCAAGTTGCAA 42 1699296 0.991286337 12 35 397 0.85 1.707570176 0.183333333 0.333333333 0.533333333 42 9 0 51 2L:1699242-1699322 8 58.5 271 FBgn0086758 5795.003333 67.42333333 103.87 0.010094904 0.867652148 0.563204005 2 2 2 0.1 dme-miR-79-3p 7mer-A1 AGCTTTA 2L 1700007 1700013 + 2L_1700007_1700013_+ 0.823349563 0.823349558 0.823349561 0 chinmo FBtr0307047 1696148 1704682 2L + 1699969 1700139 3'utr chinmo FlyBase G1057.2 ACCGAATGTTTCGCTGTAATCGAAGATGCTATCAAGAAAGCTTTAGTTCTTAGTTCGATTATCGGTTAGCTAGCTAGCTAGTGGCTAAGTGGCACCTAAGTTTAGTAGGAGGATTTAATTTTAAATGCAAAAGACACAATCACACACAATGAACACACAATAGCAATAATA 43 1700011 0.918129811 23 37 286 0.882352941 1.176091259 0.235294118 0.186046512 0.31372549 43 4 2 45 2L:1699969-1700139 7 chinmo FBtr0307047 1696148 1704682 AGCTTTA 7mer-A1 dme-miR-79-3p 2L + 1699974 1700066 3'utr chinmo FlyBase G836.1 ATGTTTCGCTGTAATCGAAGATGCTATCAAGAAAGCTTTAGTTCTTAGTTCGATTATCGGTTAGCTAGCTAGCTAGTGGCTAAGTGGCACCTA 29 1700011 0.851577693 9 23 183 0.818181818 1.079181246 0.272727273 0.379310345 0.590909091 29 6 2 36 2L:1699974-1700066 7 15 272 FBgn0086758 5795.003333 67.42333333 103.87 0.002588437 0.22247491 0.144411283 -4 -4 -4 0.1 dme-miR-14-3p 6mer2-7 AGACTG 2L 1700200 1700205 + 2L_1700200_1700205_+ 0.999516787 0.999998433 0.99975761 0.000340543 chinmo FBtr0307047 1696148 1704682 2L + 1700191 1700246 3'utr chinmo FlyBase G1058.1 TTTAGCCATAGACTGCGCAGTGACGAGATGAGCATGATACCACCACATAAACTTAT 25 1700199 0.904818819 4 25 116 1 1.431363764 0.444444444 0.08 0.148148148 25 0 0 27 2L:1700191-1700246 6 chinmo FBtr0307047 1696148 1704682 AGACTG 6mer2-7 dme-miR-14-3p 2L + 1700191 1700248 3'utr chinmo FlyBase G837.1 TTTAGCCATAGACTGCGCAGTGACGAGATGAGCATGATACCACCACATAAACTTATAC 18 1700199 0.897878472 5 14 67 0.857142857 1.079181246 0.285714286 0.388888889 0.607142857 18 3 1 24 2L:1700191-1700248 6 15.5 273 FBgn0086758 5795.003333 67.42333333 103.87 0.002674718 0.22989074 0.149224993 1 1 1 0.1 dme-miR-252-5p 7mer-m8 GTACTTA 2L 1701697 1701703 + 2L_1701697_1701703_+ 0.588298679 0.588298705 0.588298692 0 chinmo FBtr0307047 1696148 1704682 2L + 1701675 1701712 3'utr chinmo FlyBase G1068.1 AAAGCCCCTCAACAAGCCAATTGTACTTACGATTACTT 32 1701696 0.771457759 2 32 191 1 1.602059991 0 0.21875 0.375 32 0 0 40 2L:1701675-1701712 7 chinmo FBtr0307047 1696148 1704682 GTACTTA 7mer-m8 dme-miR-252-5p 2L + 1701673 1701709 3'utr chinmo FlyBase G844.1 CGAAAGCCCCTCAACAAGCCAATTGTACTTACGATTA 19 1701696 0.783020989 2 18 111 1 1.477121255 0.033333333 0.526315789 0.7 19 0 0 30 2L:1701673-1701709 7 25.5 274 FBgn0086758 5795.003333 67.42333333 103.87 0.004400343 0.378207347 0.245499182 1 1 1 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 2L 1706762 1706767 + 2L_1706762_1706767_+ 0.997705324 1 0.998852662 0.001622598 cpb FBtr0077881|FBtr0331630 1706226|1706226 1706777|1706962 2L + 1706705 1706795 3'utr cpb FlyBase G1081.2 TTTGCACCGAAGTCGAGGCACTTGCGTTTCGTTCTTAATCCTTCCGCGAATAAATATTGTGTTTATTAATTGTAACTTTGTGTTTGTGTGT 29 1706761 0.984897192 13 27 253 0.9375 1.176091259 0.15625 0.103448276 0.1875 29 1 1 30 2L:1706705-1706795 6 cpb FBtr0077881|FBtr0331630 1706226|1706226 1706777|1706962 TGTGTT 6mer3-8 dme-miR-317-3p 2L + 1706700 1706783 3'utr cpb FlyBase G856.1 GCATATTTGCACCGAAGTCGAGGCACTTGCGTTTCGTTCTTAATCCTTCCGCGAATAAATATTGTGTTTATTAATTGTAACTTT 28 1706761 0.734445526 14 25 250 0.902439024 1.267171728 0.073170732 0.428571429 0.609756098 28 3 1 37 2L:1706700-1706783 6 10.5 275 FBgn0011570 1677.946667 128.21 196.5033333 0.006257648 0.081896888 0.053434208 1 1 1 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 2L 1706843 1706849 + 2L_1706843_1706849_+ 0.521223855 0.521223855 0.521223855 0 cpb FBtr0331630 1706226 1706962 2L + 1706817 1706869 3'utr cpb FlyBase G1082.1 AAGCAAAATATTAACTGAAATCGCTTTGTGATTGTATTATCTGAGGAAATGCA 20 1706848 0.931265133 7 20 168 1 1.414973348 0.038461538 0.2 0.384615385 20 0 0 26 2L:1706817-1706869 7 cpb FBtr0331630 1706226 1706962 TGTGATT 7mer-m1 dme-miR-308-3p 2L + 1706815 1706867 3'utr cpb FlyBase G857.1 CGAAGCAAAATATTAACTGAAATCGCTTTGTGATTGTATTATCTGAGGAAATG 22 1706848 0.970157702 7 22 179 1 1.544068044 0.057142857 0.454545455 0.657142857 22 0 0 35 2L:1706815-1706867 7 19.5 276 FBgn0011570 1677.946667 128.21 196.5033333 0.011621347 0.15209422 0.099234958 -5 -5 -5 0.1 dme-miR-7-5p 7mer-A1 TCTTCCA 2L 1707615 1707621 - 2L_1707615_1707621_- 0.508804274 0.733036606 0.62092044 0.15855618 CG17660 FBtr0077912 1707130 1707771 2L - 1707542 1707679 3'utr CG17660 FlyBase G6828.2 TAGTTCTATCCGCCATTGAGGAGGAAAACCCCTTATTGCTGCGCTGCGCTGACACTGATCTTCCAATTTCGAGAACCGTCTGTCCGGCCACGCCTTCTGAGCCCGTGTAAAATAATGTATGTAATCGTAGTTCCTTCT 180 1707631 0.801228029 29 162 1080 0.887892377 1.092545208 0.197309417 0.194444444 0.349775785 180 10 15 198 2L:1707542-1707679 7 CG17660 FBtr0077912 1707130 1707771 TCTTCCA 7mer-A1 dme-miR-7-5p 2L - 1707549 1707679 3'utr CG17660 FlyBase G5340.1 TAGTTCTATCCGCCATTGAGGAGGAAAACCCCTTATTGCTGCGCTGCGCTGACACTGATCTTCCAATTTCGAGAACCGTCTGTCCGGCCACGCCTTCTGAGCCCGTGTAAAATAATGTATGTAATCGTAGT 171 1707630 0.780137689 25 148 1006 0.88973384 1.290034611 0.16730038 0.409356725 0.615969582 171 18 11 234 2L:1707549-1707679 7 57 277 FBgn0031356 556.82 28.87 44.32666667 0.102367013 1.974367856 1.285907655 10 9 9.5 0.1 dme-miR-184-3p 6mer2-7 CCGTCC 2L 1711399 1711404 - 2L_1711399_1711404_- 0.99758677 0.980633723 0.989110246 0.011987652 frtz FBtr0333545|FBtr0077911 1711300|1711300 1711751|1711751 2L - 1711337 1711412 3'utr frtz FlyBase G6837.1 AACTATTGCCGTCCCAGTTAGTGCAAAGCTTTAAATAGGAAAGTTTTACTCATAGGTTCTCTATACTCTTTACACA 57 1711406 0.982518515 9 46 376 0.830985915 1.770852012 0.028169014 0.210526316 0.366197183 57 12 0 59 2L:1711337-1711412 6 frtz FBtr0333545|FBtr0077911 1711300|1711300 1711751|1711751 CCGTCC 6mer2-7 dme-miR-184-3p 2L - 1711378 1711412 3'utr frtz FlyBase G5348.2 AACTATTGCCGTCCCAGTTAGTGCAAAGCTTTAAA 38 1711406 0.683313038 6 31 206 0.833333333 0.954242509 0 0.342105263 0.537037037 38 5 4 45 2L:1711378-1711412 6 38.5 278 FBgn0086698 6514.663333 221.8366667 342.0966667 0.005909745 0.173551111 0.112541289 2 2 2 0.1 dme-miR-7-5p 8mer-A1 GTCTTCCA 2L 1711693 1711700 - 2L_1711693_1711700_- 0.675381664 0.67538166 0.675381662 0 frtz FBtr0333545|FBtr0077911|FBtr0333544 1711300|1711300|1711598 1711751|1711751|1711751 2L - 1711678 1711714 3'utr frtz FlyBase G6838.1 CGGTTAAGCGCTGCGTCTTCCAATCGTTTGTAACTAT 19 1711697 0.630435661 6 16 133 0.80952381 0.929418926 0.380952381 0.105263158 0.19047619 19 3 1 17 2L:1711678-1711714 8 frtz FBtr0333545|FBtr0077911|FBtr0333544 1711300|1711300|1711598 1711751|1711751|1711751 GTCTTCCA 8mer-A1 dme-miR-7-5p 2L - 1711650 1711713 3'utr frtz FlyBase G5349.1 GGTTAAGCGCTGCGTCTTCCAATCGTTTGTAACTATTGTAGTAGGCTGCTCCTTCTACCCTCTT 18 1711697 0.971354525 5 18 111 1 1.322219295 0.238095238 0.111111111 0.238095238 18 0 0 21 2L:1711650-1711713 8 18 279 FBgn0086698 6514.663333 221.8366667 342.0966667 0.002762998 0.081140779 0.052616707 -3 -3 -3 0.1 dme-miR-92b-3p 8mer-m1 GTGCAATT 2L 1711735 1711742 - 2L_1711735_1711742_- 0.596698356 0.596698356 0.596698356 0 frtz FBtr0333545|FBtr0077911|FBtr0333544 1711300|1711300|1711598 1711751|1711751|1711751 2L - 1711717 1711763 stop_codon frtz FlyBase G6839.1 GGCGTGGTCTAATAATTCATAGTGCAATTCCCAGGCGTACACCACAC 25 1711744 0.684334359 4 21 148 0.892857143 1.397940009 0.285714286 0.12 0.214285714 25 3 0 25 2L:1711717-1711763 8 frtz FBtr0333545|FBtr0077911|FBtr0333544 1711300|1711300|1711598 1711751|1711751|1711751 GTGCAATT 8mer-m1 dme-miR-92b-3p 2L - 1711720 1711778 stop_codon frtz FlyBase G5350.1 AAGGTGGTCCACTTCGGCGTGGTCTAATAATTCATAGTGCAATTCCCAGGCGTACACCA 7 1711744 0.802747528 5 7 38 1 1.079181246 0 0.571428571 0.75 7 0 0 12 2L:1711720-1711778 8 14 280 FBgn0086698 6514.663333 221.8366667 342.0966667 0.002148998 0.063109495 0.040924105 2 2 2 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 1716306 1716311 - 2L_1716306_1716311_- 0.978454165 0.979653952 0.979054059 0.000848387 Rim2 FBtr0305618|FBtr0305618|FBtr0305618|FBtr0306167|FBtr0306167|FBtr0306167 1716242|1716242|1716242|1716242|1716242|1716242 1717102|1717102|1717102|1717102|1717102|1717102 2L - 1716247 1716354 3'utr Rim2 FlyBase G6844.1 AAAACGTATTTCACTGATAATGAGCAAAGAACTAAGGAAACCACTGTGAATAATTGATTGCAATCCGATTTGATGGTGAAATCAATAAATACAACAATTTTGTTTAAA 191 1716304 0.959861953 16 174 855 0.909465021 1.742332282 0.230452675 0.219895288 0.386831276 191 19 3 221 2L:1716247-1716354 6 Rim2 FBtr0305618|FBtr0305618|FBtr0305618|FBtr0306167|FBtr0306167|FBtr0306167 1716242|1716242|1716242|1716242|1716242|1716242 1717102|1717102|1717102|1717102|1717102|1717102 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 1716250 1716354 3'utr Rim2 FlyBase G5354.1 AAAACGTATTTCACTGATAATGAGCAAAGAACTAAGGAAACCACTGTGAATAATTGATTGCAATCCGATTTGATGGTGAAATCAATAAATACAACAATTTTGTTT 130 1716304 0.957515363 17 121 580 0.926829268 1.67669361 0.243902439 0.415384615 0.629268293 130 12 3 190 2L:1716250-1716354 6 138 281 FBgn0031359 376.9533333 20.33333333 30.89333333 0.366093062 6.786885246 4.466983168 -7 -7 -7 0.1 dme-miR-999-3p 6mer3-8 AGTTAA 2L 1716730 1716735 - 2L_1716730_1716735_- 0.999997194 0.999999998 0.999998596 1.98E-06 Rim2 FBtr0305618|FBtr0306167 1716242|1716242 1717102|1717102 2L - 1716444 1716877 3'utr Rim2 FlyBase G6845.2 AAGAAAAAACCAATAATGGGAAACACGCACCAGGATCGAAGTGCACCATCCACACCCTAAACCCACTTGCTGCATGCCACAGAAGGATGTGGTATGCCACCGCAGGGCGAAACGTTATCAAAATTTGAAAAGGCTGCTATTTAGTTAAAGTTACAATATATATTGAGTGTATAAATGTGGTTGATACTTGGATAATATAGTGTACATAGGACTCGATTCGCTCAGAGTGCATTGTAAATAGTTAAAGAGTGAGTTCGCTGGCGTAGTTTTCTTAGTTGTAAGCACAAAATGTTGAATCGGCCGCAGTTGCCAGTAGATGCCGCTAAATATATATATATATAGATATAAAGCCGACCGATCCGATTCGTAAACTGTAAAAGTTTCCGTTAAGTTTCCTCAAATGCGATATACGATTTAGTTATCATTACTCTACT 656 1716739 0.997252881 77 585 5290 0.888020833 1.833784375 0.203125 0.149390244 0.2734375 656 77 9 682 2L:1716444-1716877 6 Rim2 FBtr0305618|FBtr0306167 1716242|1716242 1717102|1717102 AGTTAA 6mer3-8 dme-miR-999-3p 2L - 1716503 1716860 3'utr Rim2 FlyBase G5355.2 GGGAAACACGCACCAGGATCGAAGTGCACCATCCACACCCTAAACCCACTTGCTGCATGCCACAGAAGGATGTGGTATGCCACCGCAGGGCGAAACGTTATCAAAATTTGAAAAGGCTGCTATTTAGTTAAAGTTACAATATATATTGAGTGTATAAATGTGGTTGATACTTGGATAATATAGTGTACATAGGACTCGATTCGCTCAGAGTGCATTGTAAATAGTTAAAGAGTGAGTTCGCTGGCGTAGTTTTCTTAGTTGTAAGCACAAAATGTTGAATCGGCCGCAGTTGCCAGTAGATGCCGCTAAATATATATATATATAGATATAAAGCCGACCGATCCGATTCGTAAACTGT 284 1716739 0.989492683 50 255 2137 0.904761905 1.734685557 0.169047619 0.348591549 0.55952381 284 34 6 380 2L:1716503-1716860 6 121.5 282 FBgn0031359 376.9533333 20.33333333 30.89333333 0.322321065 5.975409836 3.932887354 4 4 4 0.1 dme-miR-190-5p 6mer3-8 ACATAT 2L 17367730 17367735 - 2L_17367730_17367735_- 0.99990134 0.999993474 0.999947407 6.52E-05 Lrch FBtr0080968|FBtr0080969 17367509|17367509 17368196|17368196 2L - 17367698 17367814 3'utr Lrch FlyBase G11109.1 CACCCATACGAGCGAAATATCGGGCCAAAATTACGACTAGCGATTAGTTGCATATTGAATACTGTTTTAAGTATGAATCACATATGAACATCCAAATATTTAGATATTTATCGAATT 15 17367731 0.970578688 11 14 85 0.9375 0.875061263 0.125 0.066666667 0.125 15 0 1 15 2L:17367698-17367814 6 Lrch FBtr0080968|FBtr0080969 17367509|17367509 17368196|17368196 ACATAT 6mer3-8 dme-miR-190-5p 2L - 17367707 17367746 3'utr Lrch FlyBase G8545.1 AAGTATGAATCACATATGAACATCCAAATATTTAGATATT 7 17367730 0.741111066 3 6 37 1 0.954242509 0.222222222 0.142857143 0.333333333 7 0 0 9 2L:17367707-17367746 6 6.5 283 FBgn0032633 3134.436667 93.34666667 144.12 0.002073738 0.06963291 0.045101304 -4 -5 -4.5 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 17368997 17369003 - 2L_17368997_17369003_- 0.658721223 0.658716545 0.658718884 3.32E-06 Lrch FBtr0339797 17368740 17370818 2L - 17368970 17369027 3'utr Lrch FlyBase G11113.1 ATTGAAGGGAAGACAAAGCATTGAGGCAGCTGTAATCAGTCATACATTTTTTATGAAA 156 17369007 0.90037982 5 156 522 1 2.240549248 0.327586207 0.096153846 0.189655172 156 0 0 174 2L:17368970-17369027 7 Lrch FBtr0339797 17368740 17370818 GGCAGCT 7mer-m8 dme-miR-980-3p 2L - 17368983 17369026 3'utr Lrch FlyBase G8549.1 TTGAAGGGAAGACAAAGCATTGAGGCAGCTGTAATCAGTCATAC 102 17369007 0.782052038 4 102 318 1 2.184691431 0.37254902 0.37254902 0.581699346 102 0 0 153 2L:17368983-17369026 7 128.5 284 FBgn0032633 3134.436667 93.34666667 144.12 0.040996202 1.376589059 0.891618096 4 4 4 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 17369156 17369163 - 2L_17369156_17369163_- 0.500120255 0.500120317 0.500120286 0 Lrch FBtr0339797 17368740 17370818 2L - 17369149 17369183 3'utr Lrch FlyBase G11114.1 ATTAATTTAGGCATACTATTGTACTTAAACGATGA 14 17369164 0.732390734 2 14 116 1 1.146128036 0 0 0 14 0 0 14 2L:17369149-17369183 8 Lrch FBtr0339797 17368740 17370818 GTACTTAA 8mer-A1 dme-miR-252-5p 2L - 17369146 17369181 3'utr Lrch FlyBase G8550.1 TAATTTAGGCATACTATTGTACTTAAACGATGAAAA 11 17369164 0.674633709 4 10 92 0.944444444 1.230448921 0.333333333 0.454545455 0.666666667 11 1 0 17 2L:17369146-17369181 8 12.5 285 FBgn0032633 3134.436667 93.34666667 144.12 0.003987957 0.133909442 0.086733278 1 1 1 0.1 dme-miR-1012-3p 7mer-A1 TGACTAA 2L 17370316 17370322 - 2L_17370316_17370322_- 0.804191141 0.577879288 0.691035214 0.160026608 Lrch FBtr0339797 17368740 17370818 2L - 17370262 17370339 3'utr Lrch FlyBase G11119.1 TATGACTATGATGACTATGACTAATAATGACTGTTTTAATTTAATAGATTTTATAATAATCTCCGGACTAAACATTAA 27 17370306 0.865440668 10 27 230 1 1.602059991 0.1 0.333333333 0.55 27 0 0 40 2L:17370262-17370339 7 Lrch FBtr0339797 17368740 17370818 TGACTAA 7mer-A1 dme-miR-1012-3p 2L - 17370290 17370338 3'utr Lrch FlyBase G8557.1 ATGACTATGATGACTATGACTAATAATGACTGTTTTAATTTAATAGATT 20 17370314 0.713741484 7 18 179 0.933333333 1.447158031 0.1 0.35 0.566666667 20 2 0 28 2L:17370290-17370338 7 21 286 FBgn0032633 3134.436667 93.34666667 144.12 0.006699768 0.224967862 0.145711907 -16 -8 -12 0.1 dme-miR-277-3p 7mer-A1 GCATTTA 2L 17370582 17370588 - 2L_17370582_17370588_- 0.823345877 0.823346163 0.82334602 2.12E-07 Lrch FBtr0339797 17368740 17370818 2L - 17370561 17370621 3'utr Lrch FlyBase G11122.1 AAATTCCCCAAAAGACAAGCAGAACACATTGAGGCATTTAATGAGAGGAAACGCAAAGACT 108 17370592 0.760599074 6 99 433 0.949152542 2.049218023 0.025423729 0.074074074 0.152542373 108 6 0 112 2L:17370561-17370621 7 Lrch FBtr0339797 17368740 17370818 GCATTTA 7mer-A1 dme-miR-277-3p 2L - 17370523 17370619 3'utr Lrch FlyBase G8559.1 ATTCCCCAAAAGACAAGCAGAACACATTGAGGCATTTAATGAGAGGAAACGCAAAGACTTCAAATCAATATTTGGCTCCTATTTCTGTATGATTATT 90 17370592 0.951887446 7 86 387 0.969230769 1.62324929 0.084615385 0.377777778 0.569230769 90 2 2 126 2L:17370523-17370619 7 92.5 287 FBgn0032633 3134.436667 93.34666667 144.12 0.029510885 0.990929867 0.641826256 4 4 4 0.1 dme-miR-282-5p 6mer2-7 GAGGCT 2L 17370697 17370702 - 2L_17370697_17370702_- 0.999975943 0.999987337 0.99998164 8.06E-06 Lrch FBtr0339797 17368740 17370818 2L - 17370662 17370755 3'utr Lrch FlyBase G11123.2 CAATAGAGTTAAGAGAGCTGCTTTTGCGCTTTTCCACTGGGTAGTGAGTTCTTGAGGCTGCTTTTGTTTACTGCTTAGGATTACGTCCCATATT 232 17370703 0.807255448 19 224 2219 0.971119134 1.65160103 0.472924188 0.159482759 0.296028881 232 3 5 269 2L:17370662-17370755 6 Lrch FBtr0339797 17368740 17370818 GAGGCT 6mer2-7 dme-miR-282-5p 2L - 17370664 17370753 3'utr Lrch FlyBase G8560.1 ATAGAGTTAAGAGAGCTGCTTTTGCGCTTTTCCACTGGGTAGTGAGTTCTTGAGGCTGCTTTTGTTTACTGCTTAGGATTACGTCCCATA 142 17370704 0.988497431 13 141 1330 0.995192308 2.315970345 0.408653846 0.373239437 0.572115385 142 1 0 207 2L:17370664-17370753 6 174.5 288 FBgn0032633 3134.436667 93.34666667 144.12 0.055671886 1.869375803 1.210796558 1 2 1.5 0.1 dme-miR-932-5p 7mer-A1 GAATTGA 2L 17413287 17413293 - 2L_17413287_17413293_- 0.823349562 0.823349562 0.823349562 0 Dif FBtr0081009|FBtr0081008|FBtr0301578 17413246|17413246|17413246 17413514|17413514|17413514 2L - 17413266 17413379 3'utr Dif FlyBase G11138.1 TTACCGCAATGTACATAAATTTAATGAGGGAAATGCGAATCTCATTGCCCGATGCCTTGTTACGACTTTTCGTTATTGACAAAAGTGAATTGAAAATGATTATTGTTTAAATAA 26 17413290 0.979002354 14 25 172 0.966666667 1.462397998 0.4 0.153846154 0.266666667 26 1 0 29 2L:17413266-17413379 7 Dif FBtr0081008|FBtr0301578|FBtr0081009 17413246|17413246|17413246 17413514|17413514|17413514 GAATTGA 7mer-A1 dme-miR-932-5p 2L - 17413275 17413382 3'utr Dif FlyBase G8572.1 ATTTTACCGCAATGTACATAAATTTAATGAGGGAAATGCGAATCTCATTGCCCGATGCCTTGTTACGACTTTTCGTTATTGACAAAAGTGAATTGAAAATGATTATTG 23 17413319 0.976773326 13 21 142 0.96875 1.190331698 0.21875 0.304347826 0.5 23 0 1 31 2L:17413275-17413382 7 5.5 289 FBgn0011274 1172.133333 42.98333333 65.76666667 0.004692299 0.127956572 0.083628991 -3 26 11.5 0.1 dme-miR-277-3p 6mer2-7 GCATTT 2L 17413344 17413349 + 2L_17413344_17413349_+ 0.650234891 0.657850213 0.654042552 0.00538483 CG15141 FBtr0080979 17413170 17413499 2L + 17413245 17413396 3'utr CG15141 FlyBase G5019.2 TGTAAATTCTAAAGTTATATTTTATTTAAACAATAATCATTTTCAATTCACTTTTGTCAATAACGAAAAGTCGTAACAAGGCATCGGGCAATGAGATTCGCATTTCCCTCATTAAATTTATGTACATTGCGGTAAAATAGAATTATATAAGA 33 17413328 0.982462453 15 28 199 0.880952381 1.091080469 0.095238095 0.212121212 0.380952381 33 3 2 37 2L:17413245-17413396 6 CG15141 FBtr0080979 17413170 17413499 GCATTT 6mer2-7 dme-miR-277-3p 2L + 17413294 17413361 3'utr CG15141 FlyBase G3903.1 ACTTTTGTCAATAACGAAAAGTCGTAACAAGGCATCGGGCAATGAGATTCGCATTTCCCTCATTAAAT 15 17413328 0.940488661 7 15 61 1 1.301029996 0.2 0.333333333 0.5 15 0 0 20 2L:17413294-17413361 6 6.5 290 FBgn0032635 404.2066667 29.24 44.61666667 0.016080883 0.222298222 0.145685469 16 16 16 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2L 17415522 17415528 - 2L_17415522_17415528_- 0.661615013 0.661614199 0.661614606 5.66E-07 Dif FBtr0301577 17414905 17415684 2L - 17415441 17415566 5'utr Dif FlyBase G11145.1 ACAGCAAAACACACAACTGCACCAACAAATTAAACTTTTCTAGTCGTCTTTTTGTTTCAGTATTAATTATAATGATTACACAAATTTCTAGCTAAGAACCCCTGAGATCGATCGCTCACCAAATTC 218 17415529 0.992561497 18 210 2415 0.955172414 2.141449773 0.044827586 0.252293578 0.437931034 218 12 1 277 2L:17415441-17415566 7 Dif FBtr0301577 17414905 17415684 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2L - 17415486 17415544 5'utr Dif FlyBase G8580.1 CAACAAATTAAACTTTTCTAGTCGTCTTTTTGTTTCAGTATTAATTATAATGATTACAC 167 17415529 0.730211041 15 160 1896 0.954166667 2.359835482 0.016666667 0.317365269 0.525 167 11 0 229 2L:17415486-17415544 7 178.5 291 FBgn0011274 1172.133333 42.98333333 65.76666667 0.152286429 4.152772392 2.714140902 1 1 1 0.1 dme-miR-304-5p 6mer2-7 GAGATT 2L 17438779 17438784 - 2L_17438779_17438784_- 0.823241089 0.947865753 0.885553421 0.08812297 dl FBtr0081007|FBtr0340250 17438644|17438644 17439788|17439788 2L - 17438734 17438816 3'utr dl FlyBase G11164.1 ATGATTAGTCGAAATTATAGTCAAGAAAATGAGAGATTGATTCGAAATCAATATGAAATTTTTGTCGCTTTTCTACTCGTTTA 18 17438780 0.969136251 9 18 106 1 1.322219295 0.142857143 0.111111111 0.238095238 18 0 0 21 2L:17438734-17438816 6 dl FBtr0340250|FBtr0081007 17438644|17438644 17439788|17439788 GAGATT 6mer2-7 dme-miR-304-5p 2L - 17438768 17438815 3'utr dl FlyBase G8592.1 TGATTAGTCGAAATTATAGTCAAGAAAATGAGAGATTGATTCGAAATC 16 17438780 0.78324676 6 16 77 1 1.447158031 0.178571429 0.4375 0.678571429 16 0 0 28 2L:17438768-17438815 6 10 292 FBgn0260632 1797.99 61.25333333 93.53666667 0.005561766 0.163256421 0.106909946 -4 -4 -4 0.1 dme-miR-33-5p 8mer-m1 CAATGCAC 2L 17438894 17438901 - 2L_17438894_17438901_- 0.66243535 0.662431537 0.662433443 2.76E-06 dl FBtr0081007|FBtr0340250 17438644|17438644 17439788|17439788 2L - 17438877 17439067 3'utr dl FlyBase G11165.1 TGTTTTGAGATGGATGCTAGACATCTAACTGAATCCTACCTAGTCAAATAGCATCATATATATTTGATGTTTTCTTCGGTATACCAAAGACTACTTAACAAATCATCGCCCCCGATGACGTATTACTCGAATAGACTCTTTTAGAAACTATTAGAAAGCACTCAATCAATGCACAAATCCACTCACCCAGA 281 17438902 0.916373081 31 263 1689 0.949704142 1.904445041 0.159763314 0.170818505 0.310650888 281 14 3 321 2L:17438877-17439067 8 dl FBtr0340250|FBtr0081007 17438644|17438644 17439788|17439788 CAATGCAC 8mer-m1 dme-miR-33-5p 2L - 17438865 17439006 3'utr dl FlyBase G8593.1 ATTTGATGTTTTCTTCGGTATACCAAAGACTACTTAACAAATCATCGCCCCCGATGACGTATTACTCGAATAGACTCTTTTAGAAACTATTAGAAAGCACTCAATCAATGCACAAATCCACTCACCCAGAACACCATGAAAT 157 17438928 0.976044885 19 147 938 0.951020408 2.367355921 0.093877551 0.324840764 0.567346939 157 12 0 233 2L:17438865-17439006 8 51 293 FBgn0260632 1797.99 61.25333333 93.53666667 0.028365008 0.832607749 0.545240726 1 27 14 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 17439328 17439333 - 2L_17439328_17439333_- 0.999984651 0.999983059 0.999983855 1.13E-06 dl FBtr0081007|FBtr0340250 17438644|17438644 17439788|17439788 2L - 17439248 17439360 3'utr dl FlyBase G11167.1 AAATTGAAACCGAAAACCCGATCATATGTACCTACAACACGGTGTGTATATTTTGTCTTATAGATCCAGCGCACTTGAGGCGGAAACGTCAGAAGACTGGCGGTGATCCCATG 84 17439334 0.953880843 10 80 370 0.95959596 1.977723605 0.303030303 0.154761905 0.282828283 84 4 0 95 2L:17439248-17439360 6 dl FBtr0340250|FBtr0081007 17438644|17438644 17439788|17439788 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L - 17439313 17439358 3'utr dl FlyBase G8595.1 ATTGAAACCGAAAACCCGATCATATGTACCTACAACACGGTGTGTA 50 17439334 0.958975607 3 47 230 0.962025316 1.880813592 0.240506329 0.44 0.64556962 50 3 0 76 2L:17439313-17439358 6 60 294 FBgn0260632 1797.99 61.25333333 93.53666667 0.033370597 0.979538529 0.641459677 1 1 1 0.1 dme-miR-2b-2-5p 6mer2-7 TGAAGA 2L 17461005 17461010 - 2L_17461005_17461010_- 0.903765107 0.993010267 0.948387687 0.063105886 BicD FBtr0081002|FBtr0330225|FBtr0330226 17460815|17459603|17460815 17461725|17461725|17461665 2L - 17460955 17461020 3'utr BicD FlyBase G11187.1 AGATAGATGATGAAGATTTTTGTATTTATTGAGCGGCATTTGGTCGCCATGAAATGAAGAAATTGT 7 17460995 0.989117899 5 7 50 1 0.954242509 0.222222222 0.142857143 0.333333333 7 0 0 9 2L:17460955-17461020 6 BicD FBtr0081002|FBtr0330225|FBtr0330226 17460815|17459603|17460815 17461725|17461725|17461665 TGAAGA 6mer2-7 dme-miR-2b-2-5p 2L - 17460984 17461020 3'utr BicD FlyBase G8607.1 AGATAGATGATGAAGATTTTTGTATTTATTGAGCGGC 5 17461002 0.86121903 4 5 49 1 0.84509804 0.142857143 0.2 0.428571429 5 0 0 7 2L:17460984-17461020 6 4.5 295 FBgn0000183 544.58 15.32 23.58666667 0.008263249 0.293733681 0.190785755 -15 -8 -11.5 0.1 dme-miR-283-5p 7mer-m8 TGATATT 2L 17461215 17461221 - 2L_17461215_17461221_- 0.620203673 0.620203677 0.620203675 0 BicD FBtr0081002|FBtr0330225|FBtr0330226 17460815|17459603|17460815 17461725|17461725|17461665 2L - 17461198 17461240 3'utr BicD FlyBase G11189.1 GATGTTGAACAGATGGTATTGATATTGGCAACTGAAACATGCA 9 17461215 0.836989282 4 9 57 1 1.041392685 0.272727273 0.222222222 0.363636364 9 0 0 11 2L:17461198-17461240 7 BicD FBtr0081002|FBtr0330225|FBtr0330226 17460815|17459603|17460815 17461725|17461725|17461665 TGATATT 7mer-m8 dme-miR-283-5p 2L - 17461203 17461248 3'utr BicD FlyBase G8608.1 CACAAATTGATGTTGAACAGATGGTATTGATATTGGCAACTGAAAC 7 17461226 0.782233352 5 7 49 1 1.176091259 0 0.714285714 0.866666667 7 0 0 15 2L:17461203-17461248 7 6.5 296 FBgn0000183 544.58 15.32 23.58666667 0.011935804 0.424281984 0.275579423 -6 5 -0.5 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 2L 17461499 17461504 - 2L_17461499_17461504_- 0.999996193 0.999997627 0.99999691 9.90E-07 BicD FBtr0081002|FBtr0330225|FBtr0305688|FBtr0330226 17460815|17459603|17461396|17460815 17461725|17461725|17462145|17461665 2L - 17461430 17461674 stop_codon BicD FlyBase G11191.1 AAGTTGTAAAGTCGTTGGAGTTCCTGCGGAAATGAGAGATTCCCAAAACCACATGATATACTGCGAACGTATTTGAGAACGAAGCTATATCCCAGCTGTATCCAACTACTATAACTATGTTTGTTTGTATTGTACTTGTATTTATTGAAAGTTTAGTTAGATGAAAGTTTTGTGTTAGGCAAGGGAGCAACAAACGGTTATTAACGGTTAGTTACTTAAACGTCCATTTAATTTAATTAAAAACA 159 17461505 0.943649442 31 154 1175 0.972677596 1.949390007 0.169398907 0.144654088 0.256830601 159 4 1 178 2L:17461430-17461674 6 BicD FBtr0081002|FBtr0330225|FBtr0305688|FBtr0330226 17460815|17459603|17461396|17460815 17461725|17461725|17462145|17461665 TGTGTT 6mer3-8 dme-miR-317-3p 2L - 17461431 17461525 3'utr BicD FlyBase G8609.1 AGTTTAGTTAGATGAAAGTTTTGTGTTAGGCAAGGGAGCAACAAACGGTTATTAACGGTTAGTTACTTAAACGTCCATTTAATTTAATTAAAAAC 72 17461505 0.756518576 14 68 614 0.944954128 2.012837225 0.247706422 0.416666667 0.614678899 72 6 0 103 2L:17461431-17461525 6 44.5 297 FBgn0000183 544.58 15.32 23.58666667 0.081714349 2.904699739 1.886659129 1 1 1 0.1 dme-miR-283-5p 6mer3-8 TGATAT 2L 17461616 17461621 - 2L_17461616_17461621_- 0.999989254 0.999993871 0.999991562 3.25E-06 BicD FBtr0081002|FBtr0330225|FBtr0305688|FBtr0330226 17460815|17459603|17461396|17460815 17461725|17461725|17462145|17461665 2L - 17461430 17461674 stop_codon BicD FlyBase G11191.1 AAGTTGTAAAGTCGTTGGAGTTCCTGCGGAAATGAGAGATTCCCAAAACCACATGATATACTGCGAACGTATTTGAGAACGAAGCTATATCCCAGCTGTATCCAACTACTATAACTATGTTTGTTTGTATTGTACTTGTATTTATTGAAAGTTTAGTTAGATGAAAGTTTTGTGTTAGGCAAGGGAGCAACAAACGGTTATTAACGGTTAGTTACTTAAACGTCCATTTAATTTAATTAAAAACA 159 17461621 0.943649442 31 154 1175 0.972677596 1.949390007 0.169398907 0.144654088 0.256830601 159 4 1 178 2L:17461430-17461674 6 BicD FBtr0081002|FBtr0330225|FBtr0305688|FBtr0330226 17460815|17459603|17461396|17460815 17461725|17461725|17462145|17461665 TGATAT 6mer3-8 dme-miR-283-5p 2L - 17461593 17461651 3'utr BicD FlyBase G8610.1 CTGCGGAAATGAGAGATTCCCAAAACCACATGATATACTGCGAACGTATTTGAGAACGA 25 17461621 0.888477998 7 25 101 1 1.602059991 0.175 0.44 0.65 25 0 0 40 2L:17461593-17461651 6 35 298 FBgn0000183 544.58 15.32 23.58666667 0.064269712 2.2845953 1.483889203 0 0 0 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 2L 17475521 17475526 - 2L_17475521_17475526_- 1 1 1 0 Aac11 FBtr0081001 17474910 17475587 2L - 17475510 17475548 3'utr Aac11 FlyBase G11207.1 ACTTCACTTGAATGGTTTGTCCCTAGTCCGTAGACATAC 7 17475518 0.975400187 5 7 52 1 0.954242509 0.444444444 0.142857143 0.333333333 7 0 0 9 2L:17475510-17475548 6 Aac11 FBtr0081001 17474910 17475587 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 2L - 17475511 17475540 3'utr Aac11 FlyBase G8624.1 TGAATGGTTTGTCCCTAGTCCGTAGACATA 11 17475532 0.55876014 6 10 80 0.956521739 1.342422681 0.173913043 0.636363636 0.826086957 11 1 0 22 2L:17475511-17475540 6 9 299 FBgn0027885 2398.67 116.9633333 177.4933333 0.003752079 0.076947191 0.05070613 -8 6 -1 0.1 dme-bantam-3p 8mer-A1 TGATCTCA 2L 17481931 17481938 + 2L_17481931_17481938_+ 0.63013607 0.630284675 0.630210372 0.000105076 CG5110 FBtr0306162 17481785 17482037 2L + 17481886 17481965 3'utr CG5110 FlyBase G5034.1 CACCATTGTACTATTCCGGGAATTTATTTCATATCCTGCGAAGGGTGATCTCAAAGATGAACAAAGTTCCGAGTCCTCCG 38 17481931 0.978760997 7 34 229 0.931818182 1.311753861 0.454545455 0.157894737 0.272727273 38 2 1 41 2L:17481886-17481965 8 CG5110 FBtr0306162 17481785 17482037 TGATCTCA 8mer-A1 dme-bantam-3p 2L + 17481890 17481944 3'utr CG5110 FlyBase G3918.1 ATTGTACTATTCCGGGAATTTATTTCATATCCTGCGAAGGGTGATCTCAAAGATG 19 17481931 0.971694183 6 18 109 0.962962963 1.414973348 0.518518519 0.368421053 0.555555556 19 1 0 26 2L:17481890-17481944 8 25.5 300 FBgn0032642 238.3333333 55.84666667 85.14666667 0.106993007 0.456607377 0.299483245 0 0 0 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA 2L 17482262 17482269 - 2L_17482262_17482269_- 0.594473106 0.525048245 0.559760675 0.049090818 CG6453 FBtr0080998|FBtr0305684 17481986|17482196 17482446|17482446 2L - 17482251 17482433 3'utr CG6453 FlyBase G11232.2 CGACGATGAGGATGAGCCGCAGAGAAATGTGAATGCTTGGCATGCGTAGACCAGAGATTTGGGGATTGTATTTTAGTTTTAAAGGAGAATATCAATTTTGTCGAGATCATTCCCAAACTGCAGCAGGAAAACCATCAAGAATTGTAGCTAATTAACTCAGTATATGCATTTAAGCAAAAAGTA 120 17482270 0.92162616 27 116 811 0.964788732 1.835690571 0.295774648 0.175 0.302816901 120 4 1 137 2L:17482251-17482433 8 CG6453 FBtr0080998|FBtr0305684 17481986|17482196 17482446|17482446 TGCATTTA 8mer-A1 dme-miR-277-3p 2L - 17482254 17482436 3'utr CG6453 FlyBase G8643.1 AATCGACGATGAGGATGAGCCGCAGAGAAATGTGAATGCTTGGCATGCGTAGACCAGAGATTTGGGGATTGTATTTTAGTTTTAAAGGAGAATATCAATTTTGTCGAGATCATTCCCAAACTGCAGCAGGAAAACCATCAAGAATTGTAGCTAATTAACTCAGTATATGCATTTAAGCAAAAA 91 17482270 0.981030098 22 88 628 0.976 2.086359831 0.296 0.307692308 0.496 91 3 0 122 2L:17482254-17482436 8 22 301 FBgn0032643 2643.526667 148.89 226.0466667 0.008322216 0.147760091 0.097325036 1 1 1 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 17482402 17482407 - 2L_17482402_17482407_- 0.979819831 0.732816902 0.856318367 0.174657426 CG6453 FBtr0080998|FBtr0305684 17481986|17482196 17482446|17482446 2L - 17482251 17482433 3'utr CG6453 FlyBase G11232.2 CGACGATGAGGATGAGCCGCAGAGAAATGTGAATGCTTGGCATGCGTAGACCAGAGATTTGGGGATTGTATTTTAGTTTTAAAGGAGAATATCAATTTTGTCGAGATCATTCCCAAACTGCAGCAGGAAAACCATCAAGAATTGTAGCTAATTAACTCAGTATATGCATTTAAGCAAAAAGTA 120 17482398 0.92162616 27 116 811 0.964788732 1.835690571 0.295774648 0.175 0.302816901 120 4 1 137 2L:17482251-17482433 6 CG6453 FBtr0080998|FBtr0305684 17481986|17482196 17482446|17482446 ATGTGA 6mer3-8 dme-miR-1003-3p 2L - 17482254 17482436 3'utr CG6453 FlyBase G8643.1 AATCGACGATGAGGATGAGCCGCAGAGAAATGTGAATGCTTGGCATGCGTAGACCAGAGATTTGGGGATTGTATTTTAGTTTTAAAGGAGAATATCAATTTTGTCGAGATCATTCCCAAACTGCAGCAGGAAAACCATCAAGAATTGTAGCTAATTAACTCAGTATATGCATTTAAGCAAAAA 91 17482398 0.981030098 22 88 628 0.976 2.086359831 0.296 0.307692308 0.496 91 3 0 122 2L:17482254-17482436 6 35 302 FBgn0032643 2643.526667 148.89 226.0466667 0.013239889 0.235072873 0.154835285 -9 -9 -9 0.1 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 2L 17973602 17973608 + 2L_17973602_17973608_+ 0.620203537 0.620204028 0.620203782 3.54E-07 CG5674 FBtr0290267|FBtr0081021|FBtr0340182|FBtr0081022 17973392|17973392|17973392|17972122 17974868|17974868|17974868|17974868 2L + 17973591 17973619 3'utr CG5674 FlyBase G5044.1 AGAGAGCTATGTGGTGCTGAAAATGCAAT 6 17973602 0.682697517 2 6 28 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2L:17973591-17973619 7 CG5674 FBtr0340182|FBtr0081022|FBtr0290267|FBtr0081021 17973392|17972122|17973392|17973392 17974868|17974868|17974868|17974868 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 2L + 17973587 17973616 3'utr CG5674 FlyBase G3923.1 AAGCAGAGAGCTATGTGGTGCTGAAAATGC 5 17973602 0.938693162 3 4 24 1 0.84509804 0.285714286 0.2 0.428571429 5 0 0 7 2L:17973587-17973616 7 5.5 303 FBgn0032656 133.77 5.08 7.833333333 0.041115347 1.082677165 0.70212766 0 0 0 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 17974325 17974331 + 2L_17974325_17974331_+ 0.753476076 0.736023631 0.744749853 0.012340781 CG5674 FBtr0290267|FBtr0290267|FBtr0290267|FBtr0081021|FBtr0081021|FBtr0081021|FBtr0340182|FBtr0340182|FBtr0340182|FBtr0081022|FBtr0081022|FBtr0081022 17973392|17973392|17973392|17973392|17973392|17973392|17973392|17973392|17973392|17972122|17972122|17972122 17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868 2L + 17974295 17974344 3'utr CG5674 FlyBase G5045.1 TTATTTTGTATCTTTGGACTAAAAACACATTGTGATAAAATGCACCATGA 101 17974324 0.830697806 5 93 569 0.93495935 1.28254659 0.154471545 0.188118812 0.333333333 101 3 5 115 2L:17974295-17974344 7 CG5674 FBtr0340182|FBtr0340182|FBtr0340182|FBtr0081022|FBtr0081022|FBtr0081022|FBtr0290267|FBtr0290267|FBtr0290267|FBtr0081021|FBtr0081021|FBtr0081021 17973392|17973392|17973392|17972122|17972122|17972122|17973392|17973392|17973392|17973392|17973392|17973392 17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 17974288 17974353 3'utr CG5674 FlyBase G3924.1 AAATAGTTTATTTTGTATCTTTGGACTAAAAACACATTGTGATAAAATGCACCATGAGCTTTAGAG 75 17974324 0.810359648 6 72 415 0.971962617 1.414973348 0.186915888 0.32 0.523364486 75 0 3 104 2L:17974288-17974353 7 71.5 304 FBgn0032656 133.77 5.08 7.833333333 0.534499514 14.07480315 9.127659574 1 1 1 0.1 dme-miR-12-5p 6mer3-8 AATACT 2L 17974708 17974713 + 2L_17974708_17974713_+ 0.99985465 0.999858167 0.999856409 2.47E-06 CG5674 FBtr0290267|FBtr0081021|FBtr0340182|FBtr0081022 17973392|17973392|17973392|17972122 17974868|17974868|17974868|17974868 2L + 17974683 17974741 3'utr CG5674 FlyBase G5049.1 TGTTTAGCTAAGTGATAGGAGACACAATACTTGCAAGTTTAGGATGATACGATCTACAA 17 17974710 0.963778407 5 17 91 1 1.301029996 0.1 0.176470588 0.3 17 0 0 20 2L:17974683-17974741 6 CG5674 FBtr0340182|FBtr0081022|FBtr0290267|FBtr0081021 17973392|17972122|17973392|17973392 17974868|17974868|17974868|17974868 AATACT 6mer3-8 dme-miR-12-5p 2L + 17974682 17974733 3'utr CG5674 FlyBase G3928.1 TTGTTTAGCTAAGTGATAGGAGACACAATACTTGCAAGTTTAGGATGATACG 11 17974710 0.978394521 5 9 62 0.875 1.146128036 0.25 0.454545455 0.625 11 2 0 14 2L:17974682-17974733 6 11 305 FBgn0032656 133.77 5.08 7.833333333 0.082230694 2.165354331 1.404255319 -2 -2 -2 0.1 dme-miR-304-5p 7mer-m8 TGAGATT 2L 18129026 18129032 + 2L_18129026_18129032_+ 0.620203431 0.620203431 0.620203431 0 CG5758 FBtr0081037|FBtr0340577|FBtr0340575|FBtr0081036|FBtr0081035|FBtr0340576 18128943|18128943|18128943|18128943|18128943|18128943 18129862|18129862|18129862|18129862|18129862|18129862 2L + 18128986 18129128 3'utr CG5758 FlyBase G5059.1 TATCGCGATGGTAAATGCGAAAATAACACAGGCGGCACTTTGAGATTGTTTTTGGGATCCCTCAATCGGCCTTCGAGTCTTGTATCAGTCTATTTCCGAAGTAGGAGACATTCCAGGCCCTTCGACAATTAGTCTATTGTCGC 39 18129025 0.978304154 14 39 258 1 1.681241237 0.0625 0.179487179 0.333333333 39 0 0 48 2L:18128986-18129128 7 CG5758 FBtr0081035|FBtr0340576|FBtr0340575|FBtr0081036|FBtr0081037|FBtr0340577 18128943|18128943|18128943|18128943|18128943|18128943 18129862|18129862|18129862|18129862|18129862|18129862 TGAGATT 7mer-m8 dme-miR-304-5p 2L + 18129013 18129071 3'utr CG5758 FlyBase G3934.1 ACAGGCGGCACTTTGAGATTGTTTTTGGGATCCCTCAATCGGCCTTCGAGTCTTGTATC 9 18129025 0.954842385 7 9 67 1 1.146128036 0 0.444444444 0.642857143 9 0 0 14 2L:18129013-18129071 7 11 306 FBgn0032666 5 0.196666667 0.306666667 2.2 55.93220339 35.86956522 1 1 1 0.1 dme-bantam-3p 6mer3-8 TGATCT 2L 18129181 18129186 + 2L_18129181_18129186_+ 0.975434831 0.988471977 0.981953404 0.009218693 CG5758 FBtr0081037|FBtr0340577|FBtr0340575|FBtr0081036|FBtr0081035|FBtr0340576 18128943|18128943|18128943|18128943|18128943|18128943 18129862|18129862|18129862|18129862|18129862|18129862 2L + 18129136 18129353 3'utr CG5758 FlyBase G5060.1 TATTTTGGCAATTAATTAGCAGTATGTACAATATTTTTTTGCAATTGATCTGCGTTAGAGGAACGAATGTGAGAGGGAGGCGAGCGCTAAAAGCGTTTTTGTATAGTTCTGGGCTAATTTTGTAACGAATTTTTCTAGTTTAGTTCTTAGTTTTTCATGTATGTTTTAAGTTTAGCATTGAACGAGGCGGTGAAACGAAGTATACTACAAAGTCAACA 213 18129182 0.98306767 26 209 1617 0.984063745 2.392696953 0.470119522 0.145539906 0.274900398 213 4 0 247 2L:18129136-18129353 6 CG5758 FBtr0081035|FBtr0340576|FBtr0340575|FBtr0081036|FBtr0081037|FBtr0340577 18128943|18128943|18128943|18128943|18128943|18128943 18129862|18129862|18129862|18129862|18129862|18129862 TGATCT 6mer3-8 dme-bantam-3p 2L + 18129134 18129221 3'utr CG5758 FlyBase G3936.1 ATTATTTTGGCAATTAATTAGCAGTATGTACAATATTTTTTTGCAATTGATCTGCGTTAGAGGAACGAATGTGAGAGGGAGGCGAGCG 109 18129182 0.983885704 10 100 743 0.921212121 1.704722333 0.503030303 0.311926606 0.545454545 109 11 2 152 2L:18129134-18129221 6 137 307 FBgn0032666 5 0.196666667 0.306666667 27.4 696.6101695 446.7391304 -1 -1 -1 0.1 dme-miR-305-5p 6mer2-7 GTACAA 2L 18130050 18130055 - 2L_18130050_18130055_- 0.999923946 0.999936302 0.999930124 8.77E-06 kel FBtr0081043|FBtr0081042 18129882|18129882 18130773|18133613 2L - 18130035 18130158 3'utr kel FlyBase G11245.1 ACTCAAATTTCCATTACCCCATGGCATTTGGCACATGGACCGCTTCGTTTCAGTATGTTAAGTTATGGCTTTAAACCGGAACAATAATATTTAGCCAACTATTGTACAAGCTCTCCACTAGAAT 48 18130057 0.975265359 11 47 299 1 1.716003344 0.057692308 0.083333333 0.153846154 48 0 0 52 2L:18130035-18130158 6 kel FBtr0081043|FBtr0081042 18129882|18129882 18130773|18133613 GTACAA 6mer2-7 dme-miR-305-5p 2L - 18130013 18130097 3'utr kel FlyBase G8649.1 GTTATGGCTTTAAACCGGAACAATAATATTTAGCCAACTATTGTACAAGCTCTCCACTAGAATCCTATTGTTTAAGTCAATTAGA 28 18130057 0.976181702 5 26 159 0.921568627 1.672097858 0.137254902 0.5 0.725490196 28 4 0 47 2L:18130013-18130097 6 29.5 308 FBgn0001301 597.3333333 13.11666667 20.1 0.049386161 2.249047014 1.467661692 2 2 2 0.1 dme-bantam-3p 7mer-A1 GATCTCA 2L 18130470 18130476 - 2L_18130470_18130476_- 0.823349299 0.823349348 0.823349323 0 kel FBtr0081043|FBtr0081042 18129882|18129882 18130773|18133613 2L - 18130442 18130507 3'utr kel FlyBase G11247.1 TTTCTAATTACAACGCTGCTCTACAAAATTGGATCTCAAAACAATACAAGCATAACGAATCGACCA 383 18130478 0.984834489 5 375 3033 0.976905312 2.325310372 0.018475751 0.104438642 0.207852194 383 9 1 423 2L:18130442-18130507 7 kel FBtr0081043|FBtr0081042 18129882|18129882 18130773|18133613 GATCTCA 7mer-A1 dme-bantam-3p 2L - 18130442 18130506 3'utr kel FlyBase G8652.1 TTCTAATTACAACGCTGCTCTACAAAATTGGATCTCAAAACAATACAAGCATAACGAATCGACCA 192 18130478 0.951201856 8 184 1509 0.957692308 2.396199347 0.034615385 0.270833333 0.461538462 192 11 0 249 2L:18130442-18130506 7 280 309 FBgn0001301 597.3333333 13.11666667 20.1 0.46875 21.34688691 13.93034826 2 2 2 0.1 dme-miR-184-5p 6mer3-8 TGATAA 2L 18130853 18130858 - 2L_18130853_18130858_- 0.999971678 0.999940317 0.999955997 2.22E-05 kel FBtr0081042 18129882 18133613 2L - 18130798 18130877 3'utr kel FlyBase G11249.1 TAGATCCTGTCAGCTTAAGTGATAACGAGACTGAGACAACCAGCAGTCAAAACAACCTTCCAAGCACTACCAACAGCAAT 28 18130861 0.931365828 7 25 126 0.911764706 1.190331698 0.029411765 0.214285714 0.352941176 28 2 1 31 2L:18130798-18130877 6 kel FBtr0081042 18129882 18133613 TGATAA 6mer3-8 dme-miR-184-5p 2L - 18130831 18130876 3'utr kel FlyBase G8655.1 AGATCCTGTCAGCTTAAGTGATAACGAGACTGAGACAACCAGCAGT 15 18130862 0.958700917 5 14 69 0.884615385 1.361727836 0.115384615 0.4 0.653846154 15 3 0 23 2L:18130831-18130876 6 19.5 310 FBgn0001301 597.3333333 13.11666667 20.1 0.032645089 1.486658196 0.970149254 3 4 3.5 0.1 dme-miR-252-5p 6mer3-8 GTACTT 2L 18532142 18532147 - 2L_18532142_18532147_- 0.81787797 0.87242173 0.84514985 0.03856822 Pde11 FBtr0303163|FBtr0343830 18532023|18532023 18534130|18533334 2L - 18532120 18532171 3'utr Pde11 FlyBase G11321.1 TGTAATCCTTCTTTAGACTAGATTGTACTTTGTGAGTTTTGTTATTTATTGT 8 18532159 0.795966705 4 8 101 1 1 0 0.25 0.4 8 0 0 10 2L:18532120-18532171 6 Pde11 FBtr0343830|FBtr0303163 18532023|18532023 18533334|18534130 GTACTT 6mer3-8 dme-miR-252-5p 2L - 18532125 18532168 3'utr Pde11 FlyBase G8708.1 AATCCTTCTTTAGACTAGATTGTACTTTGTGAGTTTTGTTATTT 11 18532159 0.762208606 5 9 116 0.857142857 0.77815125 0.142857143 0.272727273 0.428571429 11 1 1 12 2L:18532125-18532168 6 8.5 311 FBgn0085370 2569.533333 47.93666667 73.66666667 0.003307994 0.177317294 0.115384615 12 12 12 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 18532523 18532528 - 2L_18532523_18532528_- 0.99998676 0.999613068 0.999799914 0.000264246 Pde11 FBtr0303163|FBtr0343830 18532023|18532023 18534130|18533334 2L - 18532494 18532582 3'utr Pde11 FlyBase G11323.1 TTATCTCTATGGGTACCAAAAGTCTAACTTTAGTAGCATTAACCAACCGCTTAGTGATGATGTTAGCTGTCAAGTAACGAGAAACCGAT 30 18532532 0.980472453 8 30 212 1 1.612783857 0.073170732 0.266666667 0.463414634 30 0 0 41 2L:18532494-18532582 6 Pde11 FBtr0343830|FBtr0303163 18532023|18532023 18533334|18534130 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L - 18532472 18532586 3'utr Pde11 FlyBase G8709.1 TGAATTATCTCTATGGGTACCAAAAGTCTAACTTTAGTAGCATTAACCAACCGCTTAGTGATGATGTTAGCTGTCAAGTAACGAGAAACCGATCCGATCGCGAGCCTAGATTGTA 22 18532532 0.977051825 10 21 134 0.965517241 1.447158031 0.068965517 0.227272727 0.413793103 22 1 0 28 2L:18532472-18532586 6 19 312 FBgn0085370 2569.533333 47.93666667 73.66666667 0.007394339 0.396356303 0.257918552 4 4 4 0.1 dme-bantam-3p 6mer3-8 TGATCT 2L 18532881 18532886 - 2L_18532881_18532886_- 0.999966159 0.999998921 0.99998254 2.31E-05 Pde11 FBtr0303162|FBtr0303163|FBtr0343830|FBtr0112544|FBtr0343831|FBtr0112545 18532726|18532023|18532023|18532726|18532726|18532726 18534130|18534130|18533334|18533334|18533334|18533334 2L - 18532857 18532899 3'utr Pde11 FlyBase G11326.1 TATGTGTATATTCTGATCTGTGTGTGTTTGTAACTTAAATTTT 14 18532886 0.735108972 5 10 164 0.6875 0.740362689 0.5 0.142857143 0.25 14 4 1 11 2L:18532857-18532899 6 Pde11 FBtr0112545|FBtr0343831|FBtr0112544|FBtr0343830|FBtr0303163|FBtr0303162 18532726|18532726|18532726|18532023|18532023|18532726 18533334|18533334|18533334|18533334|18534130|18534130 TGATCT 6mer3-8 dme-bantam-3p 2L - 18532869 18532900 3'utr Pde11 FlyBase G8711.1 GTATGTGTATATTCTGATCTGTGTGTGTTTGT 12 18532886 0.761587683 4 8 122 0.928571429 1.113943352 0.642857143 0.083333333 0.214285714 12 1 0 13 2L:18532869-18532900 6 11 313 FBgn0085370 2569.533333 47.93666667 73.66666667 0.004280933 0.229469439 0.149321267 0 0 0 0.1 dme-miR-11-3p 7mer-m1 TGTGATG 2L 18533243 18533249 - 2L_18533243_18533249_- 0.527011424 0.518976215 0.522993819 0.005681744 Pde11 FBtr0303162|FBtr0303163|FBtr0343830|FBtr0112544|FBtr0343831|FBtr0112545 18532726|18532023|18532023|18532726|18532726|18532726 18534130|18534130|18533334|18533334|18533334|18533334 2L - 18533222 18533277 3'utr Pde11 FlyBase G11329.1 TTTAACATGATAACTCTTAAACCACATATGTGATGCCTAAAAGTATGCAAGAAATC 11 18533251 0.977564917 3 10 60 0.857142857 1.079181246 0.071428571 0.272727273 0.428571429 11 2 0 12 2L:18533222-18533277 7 Pde11 FBtr0112545|FBtr0343831|FBtr0112544|FBtr0343830|FBtr0303163|FBtr0303162 18532726|18532726|18532726|18532023|18532023|18532726 18533334|18533334|18533334|18533334|18534130|18534130 TGTGATG 7mer-m1 dme-miR-11-3p 2L - 18533234 18533331 3'utr Pde11 FlyBase G8713.1 CATCCCAATCTGGTGTGTTCCTAGAAACTCGGAAACAGATTAAAGGGGATCATATTTAACATGATAACTCTTAAACCACATATGTGATGCCTAAAAGT 15 18533251 0.848829717 7 14 93 0.961538462 1.397940009 0 0.333333333 0.615384615 15 1 0 25 2L:18533234-18533331 7 7.5 314 FBgn0085370 2569.533333 47.93666667 73.66666667 0.002918818 0.156456436 0.101809955 2 2 2 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2L 18594640 18594645 + 2L_18594640_18594645_+ 0.903520918 0.863251658 0.883386288 0.028474624 CG15160 FBtr0343825|FBtr0081070 18594208|18594208 18595429|18595429 2L + 18594612 18594666 3'utr CG15160 FlyBase G5077.1 TCAAGGGGAATCTAGGACAACACGTGCAAAGACTTTACACTTACACCCTCGACTT 8 18594647 0.978755523 2 6 45 1 1 0.3 0.25 0.4 8 0 0 10 2L:18594612-18594666 6 CG15160 FBtr0081070|FBtr0343825 18594208|18594208 18595429|18595429 AAGACT 6mer3-8 dme-miR-14-3p 2L + 18594610 18594691 3'utr CG15160 FlyBase G3951.1 CATCAAGGGGAATCTAGGACAACACGTGCAAAGACTTTACACTTACACCCTCGACTTAACTTATGTTTGTGTGTTGACATAG 10 18594647 0.97703442 6 9 57 0.95 1.278753601 0.25 0.6 0.8 10 1 0 19 2L:18594610-18594691 6 5.5 315 FBgn0032688 740.6666667 26.16333333 40.19333333 0.007425743 0.210217862 0.136838613 -7 -7 -7 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2L 18599774 18599779 - 2L_18599774_18599779_- 0.999986968 0.999999999 0.999993484 9.19E-06 CG10413 FBtr0081080|FBtr0343829 18599753|18599753 18600609|18600609 2L - 18599754 18599910 3'utr CG10413 FlyBase G11351.1 GGACGGACATTGATCGATTGTCGTAGACAAGTGTTTTGTGTGTGTAAACTTTATGGAACTGTGACCTAGCTAATAATATAATAATTGATCACAGCATTCATTGTAATCGGTTCTTTCCAATATTTTAAATAAAGACTTAGCGATATGTATTTATGTA 32 18599774 0.966256522 15 31 251 0.974358974 1.579783597 0.051282051 0.15625 0.307692308 32 1 0 38 2L:18599754-18599910 6 CG10413 FBtr0343829|FBtr0081080 18599753|18599753 18600609|18600609 AAGACT 6mer3-8 dme-miR-14-3p 2L - 18599759 18599824 3'utr CG10413 FlyBase G8729.1 GATCACAGCATTCATTGTAATCGGTTCTTTCCAATATTTTAAATAAAGACTTAGCGATATGTATTT 15 18599774 0.831795305 6 14 128 1 1.322219295 0.095238095 0.266666667 0.476190476 15 0 0 21 2L:18599759-18599824 6 13 316 FBgn0032689 528.2066667 16.84 25.75 0.024611579 0.771971496 0.504854369 -5 -5 -5 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 18599962 18599967 - 2L_18599962_18599967_- 0.999992482 0.999999983 0.999996233 5.30E-06 CG10413 FBtr0081080|FBtr0343829 18599753|18599753 18600609|18600609 2L - 18599921 18599982 3'utr CG10413 FlyBase G11352.1 TTGTGGTTGTAAAATTGATGATTTCATATTGCACTTAGTTTGTAATCCATTTTTGGAAGACC 13 18599943 0.991598997 8 12 138 0.928571429 1.113943352 0.071428571 0.076923077 0.142857143 13 1 0 13 2L:18599921-18599982 6 CG10413 FBtr0343829|FBtr0081080 18599753|18599753 18600609|18600609 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L - 18599888 18599974 3'utr CG10413 FlyBase G8731.1 GTAAAATTGATGATTTCATATTGCACTTAGTTTGTAATCCATTTTTGGAAGACCTTCACAGCTCGGACGGACATTGATCGATTGTCG 10 18599964 0.994864959 6 8 90 0.866666667 1.113943352 0.266666667 0.3 0.533333333 10 2 0 13 2L:18599888-18599974 6 6 317 FBgn0032689 528.2066667 16.84 25.75 0.01135919 0.356294537 0.233009709 -24 -3 -13.5 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 2L 18600059 18600065 - 2L_18600059_18600065_- 0.521223855 0.521223853 0.521223854 0 CG10413 FBtr0081080|FBtr0343829 18599753|18599753 18600609|18600609 2L - 18600045 18600080 3'utr CG10413 FlyBase G11353.1 CGATATTAACCTCTTTGTGATTGATTATGAATATCT 24 18600066 0.621603319 4 22 235 0.911764706 0.889301703 0.058823529 0.291666667 0.5 24 0 3 31 2L:18600045-18600080 7 CG10413 FBtr0343829|FBtr0081080 18599753|18599753 18600609|18600609 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 18600045 18600094 3'utr CG10413 FlyBase G8732.1 AACGGAACTCACACCGATATTAACCTCTTTGTGATTGATTATGAATATCT 19 18600066 0.991504092 5 17 187 0.869565217 0.698970004 0 0.210526316 0.347826087 19 0 3 20 2L:18600045-18600094 7 21 318 FBgn0032689 528.2066667 16.84 25.75 0.039757166 1.247030879 0.815533981 1 1 1 0.1 dme-miR-184-5p 6mer3-8 TGATAA 2L 18600571 18600576 - 2L_18600571_18600576_- 0.966860427 0.992354056 0.979607242 0.018026768 CG10413 FBtr0081080|FBtr0343829 18599753|18599753 18600609|18600609 2L - 18600560 18600662 stop_codon CG10413 FlyBase G11356.1 CGCCCACCATTCTCGTCCATGGTGTCAGCACGGTGACCTCCACAACGCTCTAGACTTCGAATTGGAGATATTCGCGTTTCCATGAGTGATAAAATCCGGAGTG 53 18600580 0.808499054 8 50 331 0.936507937 1.469822016 0.587301587 0.188679245 0.317460317 53 3 1 59 2L:18600560-18600662 6 CG10413 FBtr0343829|FBtr0081080 18599753|18599753 18600609|18600609 TGATAA 6mer3-8 dme-miR-184-5p 2L - 18600528 18600696 stop_codon CG10413 FlyBase G8733.2 ATGGAACTGCTAACCGAACTGACCGCCGATTTGCCGCCCACCATTCTCGTCCATGGTGTCAGCACGGTGACCTCCACAACGCTCTAGACTTCGAATTGGAGATATTCGCGTTTCCATGAGTGATAAAATCCGGAGTGCAACCGGATTTAACCAATTGTGAGGGTGTATT 39 18600580 0.889122212 11 37 235 0.981132075 1.716003344 0.283018868 0.205128205 0.41509434 39 1 0 52 2L:18600528-18600696 6 27.5 319 FBgn0032689 528.2066667 16.84 25.75 0.052062955 1.633016627 1.067961165 4 4 4 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 18661256 18661263 + 2L_18661256_18661263_+ 0.650171288 0.650171332 0.65017131 0 MESR3 FBtr0343808|FBtr0343808|FBtr0343808|FBtr0329971|FBtr0329971|FBtr0329971|FBtr0329972|FBtr0329972|FBtr0329972|FBtr0081073|FBtr0081073|FBtr0081073 18661050|18661050|18661050|18661104|18661104|18661104|18661050|18661050|18661050|18661050|18661050|18661050 18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776 2L + 18661020 18661494 stop_codon MESR3 FlyBase G5088.1 TCGGACCCCCCAATCCCCAGCAGCATCGTTGAGTAGGGTCGGGCGCGTGGATCTGGAACACGAGCGCCCTATGGTGGCAGAACTGAATCTGCCTCGAAGCCACAACCCAACACAACCACGAAGAAATCCAGGAAAAACCAACCCTTAGTTCGTATGGCTAGTTATAGATCCATTTGTTATAGGCCTAAGTTATGCCAATGTGCGATCCGAGTGCGGAACTCGGCCAACACATTTATCTGTGATACGATTTAGGCGTCTTTACTTTAGAGAGGGATACTGATAACACAATTTGATAAAGAACATTTTTAAACGAAGAACATAGCAAATGAAGCGAGAGTTTTTGCAAGTTATTAAAACATATTAAGCGATTAACGTTTGTCGATAAGCAAGTTTTTTGTAAAACCTTTTCTAATATCACACATATACCCTTATGCATAATTATATTCGTACCATATAGTCCTGATATCTATCGAGT 1283 18661255 0.98555517 81 1160 9566 0.906088083 1.730844367 0.305051813 0.163678878 0.305051813 1283 120 25 1399 2L:18661020-18661494 8 MESR3 FBtr0081073|FBtr0081073|FBtr0081073|FBtr0329972|FBtr0329972|FBtr0329972|FBtr0329971|FBtr0329971|FBtr0329971|FBtr0343808|FBtr0343808|FBtr0343808 18661050|18661050|18661050|18661050|18661050|18661050|18661104|18661104|18661104|18661050|18661050|18661050 18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 18661173 18661408 3'utr MESR3 FlyBase G3962.2 ATGGCTAGTTATAGATCCATTTGTTATAGGCCTAAGTTATGCCAATGTGCGATCCGAGTGCGGAACTCGGCCAACACATTTATCTGTGATACGATTTAGGCGTCTTTACTTTAGAGAGGGATACTGATAACACAATTTGATAAAGAACATTTTTAAACGAAGAACATAGCAAATGAAGCGAGAGTTTTTGCAAGTTATTAAAACATATTAAGCGATTAACGTTTGTCGATAAGCAA 766 18661255 0.96837547 45 670 5377 0.886054422 1.762595214 0.308673469 0.392950392 0.604591837 766 117 17 1042 2L:18661173-18661408 8 589.5 320 FBgn0032694 1795.86 104.38 160.0933333 0.328254986 5.647633646 3.682227034 1 1 1 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA 2L 18661728 18661733 + 2L_18661728_18661733_+ 1 1 1 0 MESR3 FBtr0343808|FBtr0329971|FBtr0329972|FBtr0081073 18661050|18661104|18661050|18661050 18661776|18661776|18661776|18661776 2L + 18661629 18661772 3'utr MESR3 FlyBase G5090.1 ACATAAATATATATGCTATATTACACCTATCTATATATTATATATAGCTCTAAGCATTACATCATAGCCACTTGTCTGTATGAACTTCATATTTTGCCTGTGCAAAACAATCGCGAGAATCAAATAAAGCTGACAAAGAGAGCC 39 18661701 0.983022018 21 33 287 0.860465116 1.091080469 0.069767442 0.102564103 0.186046512 39 4 2 37 2L:18661629-18661772 6 MESR3 FBtr0081073|FBtr0329972|FBtr0329971|FBtr0343808 18661050|18661050|18661104|18661050 18661776|18661776|18661776|18661776 GTGCAA 6mer3-8 dme-miR-92b-3p 2L + 18661687 18661774 3'utr MESR3 FlyBase G3965.1 ACATCATAGCCACTTGTCTGTATGAACTTCATATTTTGCCTGTGCAAAACAATCGCGAGAATCAAATAAAGCTGACAAAGAGAGCCAA 15 18661704 0.982719571 8 13 102 0.846153846 1.342422681 0.076923077 0.466666667 0.692307692 15 4 0 22 2L:18661687-18661774 6 8 321 FBgn0032694 1795.86 104.38 160.0933333 0.00445469 0.076643035 0.04997085 27 24 25.5 0.1 dme-miR-995-5p 6mer3-8 AATTCG 2L 18684523 18684528 - 2L_18684523_18684528_- 0.999565998 0.999998494 0.999782246 0.000305824 msl-1 FBtr0081130 18683718 18685245 2L - 18684499 18684547 3'utr msl-1 FlyBase G11387.1 TTTTGGAGAAAAACAATGAAATTCGTAGACTTATATTTTTAAATATTTT 60 18684522 0.796462289 7 58 577 0.985074627 1.819543936 0.044776119 0.1 0.194029851 60 1 0 66 2L:18684499-18684547 6 msl-1 FBtr0081130 18683718 18685245 AATTCG 6mer3-8 dme-miR-995-5p 2L - 18684499 18684534 3'utr msl-1 FlyBase G8751.1 CAATGAAATTCGTAGACTTATATTTTTAAATATTTT 53 18684522 0.778774341 7 48 545 0.901234568 1.562292864 0.086419753 0.377358491 0.592592593 53 7 1 73 2L:18684499-18684534 6 55.5 322 FBgn0005617 2040.813333 60.53666667 92.9 0.02719504 0.916799736 0.597416577 -6 -6 -6 0.1 dme-miR-79-3p 7mer-A1 AGCTTTA 2L 18684620 18684626 - 2L_18684620_18684626_- 0.823310234 0.817179615 0.820244924 0.004334989 msl-1 FBtr0081130 18683718 18685245 2L - 18684561 18684647 3'utr msl-1 FlyBase G11388.1 TTAGATTGGTTAACTCATCTCAGCTTTATCACCTTTAAAATCGCCCGCACTAAAGTGATAAGAACACGAAAGATATTCACATAAGTT 35 18684628 0.991579344 4 30 316 0.780487805 1.204119983 0.073170732 0.085714286 0.219512195 35 8 1 32 2L:18684561-18684647 7 msl-1 FBtr0081130 18683718 18685245 AGCTTTA 7mer-A1 dme-miR-79-3p 2L - 18684600 18684664 3'utr msl-1 FlyBase G8752.1 TCAAACCAGTCGCTTAGTTAGATTGGTTAACTCATCTCAGCTTTATCACCTTTAAAATCGCCCGC 23 18684630 0.990693712 6 20 213 0.9375 1.176091259 0.1875 0.260869565 0.46875 23 1 1 30 2L:18684600-18684664 7 26.5 323 FBgn0005617 2040.813333 60.53666667 92.9 0.012985019 0.437751225 0.28525296 2 4 3 0.1 dme-miR-2a-2-5p 7mer-A1 GATGAGA 2L 18684905 18684911 - 2L_18684905_18684911_- 0.753640787 0.731315714 0.742478251 0.01578623 msl-1 FBtr0081130 18683718 18685245 2L - 18684860 18684924 3'utr msl-1 FlyBase G11390.1 TCGTTTCTTATGCGATGAGAGATCTTAAAAGGCAAGTAAATTGAGCTGTCCTATTCAAACATTTT 7 18684914 0.988381823 5 6 51 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 2L:18684860-18684924 7 msl-1 FBtr0081130 18683718 18685245 GATGAGA 7mer-A1 dme-miR-2a-2-5p 2L - 18684891 18684931 3'utr msl-1 FlyBase G8753.1 AGTTTTGTCGTTTCTTATGCGATGAGAGATCTTAAAAGGCA 7 18684914 0.812968305 3 7 57 1 1.041392685 0.090909091 0.285714286 0.545454545 7 0 0 11 2L:18684891-18684931 7 4.5 324 FBgn0005617 2040.813333 60.53666667 92.9 0.002205003 0.074335114 0.048439182 3 3 3 0.1 dme-miR-14-3p 7mer-m8 AAGACTG 2L 18685199 18685205 - 2L_18685199_18685205_- 0.671795624 0.671795831 0.671795728 1.41E-07 msl-1 FBtr0081130|FBtr0343118 18683718|18684982 18685245|18685245 2L - 18685175 18685243 3'utr msl-1 FlyBase G11392.1 AGGAAACGCCTGGGGGATCTGATACTGGAGCTAAGCAGAAGACTGTCGGTTGGGGGAAGTCGTTGCGTT 20 18685195 0.714050345 7 16 96 0.772727273 0.753327667 0.136363636 0.1 0.181818182 20 3 2 17 2L:18685175-18685243 7 msl-1 FBtr0343118|FBtr0081130 18684982|18683718 18685245|18685245 AAGACTG 7mer-m8 dme-miR-14-3p 2L - 18685179 18685237 3'utr msl-1 FlyBase G8755.1 CGCCTGGGGGATCTGATACTGGAGCTAAGCAGAAGACTGTCGGTTGGGGGAAGTCGTTG 17 18685196 0.974253973 7 12 75 0.7 1.146128036 0.1 0.176470588 0.3 17 6 0 14 2L:18685179-18685237 7 13 325 FBgn0005617 2040.813333 60.53666667 92.9 0.006370009 0.214745884 0.139935414 -10 -9 -9.5 0.1 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2L 18697931 18697936 + 2L_18697931_18697936_+ 0.997203988 0.990696346 0.993950167 0.004601639 CG10338 FBtr0343108|FBtr0081096 18697884|18697884 18698571|18698571 2L + 18697874 18697946 stop_codon CG10338 FlyBase G5102.1 TGGAAGGTGTAGGAGAATGGTGACTTTGATTGCTAGATTTTGACCTTAGTTGCTTGCTTTGACCTGAAGAATT 53 18697931 0.713999041 6 50 395 0.949152542 1.447158031 0.13559322 0.094339623 0.186440678 53 2 1 56 2L:18697874-18697946 6 CG10338 FBtr0081096|FBtr0343108 18697884|18697884 18698571|18698571 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2L + 18697913 18697955 3'utr CG10338 FlyBase G3974.1 TTGACCTTAGTTGCTTGCTTTGACCTGAAGAATTAATTTCATT 25 18697931 0.731040271 4 24 197 0.951219512 1.591064607 0.195121951 0.48 0.682926829 25 2 0 39 2L:18697913-18697955 6 34.5 326 FBgn0032700 302.7966667 15.66333333 24.19 0.113937846 2.202596297 1.426209177 0 0 0 0.1 dme-miR-283-5p 8mer-A1 TGATATTA 2L 18698010 18698017 + 2L_18698010_18698017_+ 0.592183345 0.592184132 0.592183739 5.66E-07 CG10338 FBtr0343108|FBtr0081096 18697884|18697884 18698571|18698571 2L + 18697947 18698031 3'utr CG10338 FlyBase G5103.1 AATTTCATTAGACTTCATTATCATTCTCACATATCTCACATGGCTACCATAGAGCGAAAACATTGATATTAACTAAGTGCTATTG 16 18698009 0.897352355 4 16 108 1 1.255272505 0.222222222 0.125 0.222222222 16 0 0 18 2L:18697947-18698031 8 CG10338 FBtr0081096|FBtr0343108 18697884|18697884 18698571|18698571 TGATATTA 8mer-A1 dme-miR-283-5p 2L + 18697977 18698020 3'utr CG10338 FlyBase G3975.1 ATATCTCACATGGCTACCATAGAGCGAAAACATTGATATTAACT 8 18698009 0.968120893 2 7 41 0.928571429 1.113943352 0 0.5 0.714285714 8 1 0 13 2L:18697977-18698020 8 8.5 327 FBgn0032700 302.7966667 15.66333333 24.19 0.028071643 0.542668653 0.35138487 1 1 1 0.1 dme-miR-79-3p 7mer-m8 TAGCTTT 2L 18698047 18698053 + 2L_18698047_18698053_+ 0.617979533 0.620204003 0.619091768 0.001572959 CG10338 FBtr0343108|FBtr0081096 18697884|18697884 18698571|18698571 2L + 18698034 18698104 3'utr CG10338 FlyBase G5104.1 ATTTACCTAGATTTAGCTTTGTGAATCTCGTTCGCACTTGAACATCTTCCAACTAACTCTGCCTTAGCACA 26 18698055 0.870797669 5 25 237 0.965517241 1.447158031 0.172413793 0.115384615 0.206896552 26 1 0 28 2L:18698034-18698104 7 CG10338 FBtr0081096|FBtr0343108 18697884|18697884 18698571|18698571 TAGCTTT 7mer-m8 dme-miR-79-3p 2L + 18698027 18698072 3'utr CG10338 FlyBase G3976.1 TATTGATATTTACCTAGATTTAGCTTTGTGAATCTCGTTCGCACTT 14 18698055 0.989808043 6 13 136 0.869565217 1.301029996 0.260869565 0.5 0.695652174 14 3 0 20 2L:18698027-18698072 7 17 328 FBgn0032700 302.7966667 15.66333333 24.19 0.056143286 1.085337306 0.70276974 -8 -8 -8 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 18700725 18700730 - 2L_18700725_18700730_- 0.926786595 0.991243397 0.959014996 0.04557784 CG10376 FBtr0081128 18700604 18701626 2L - 18700690 18700747 3'utr CG10376 FlyBase G11429.1 GATCCCACACAGATTAAGTACCTTTTTATACAAATCCAACGAACCTTTCATGCATTTT 13 18700723 0.983208014 3 12 92 1 1.255272505 0.166666667 0.307692308 0.5 13 0 0 18 2L:18700690-18700747 6 CG10376 FBtr0081128 18700604 18701626 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L - 18700686 18700750 3'utr CG10376 FlyBase G8780.1 AATGATCCCACACAGATTAAGTACCTTTTTATACAAATCCAACGAACCTTTCATGCATTTTATCG 15 18700723 0.983883696 5 14 109 0.944444444 0.929418926 0.055555556 0.2 0.333333333 15 0 1 17 2L:18700686-18700750 6 12 329 FBgn0032702 2337.326667 113.6933333 174.6866667 0.005134071 0.105547086 0.068694424 -7 -7 -7 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 18701315 18701321 - 2L_18701315_18701321_- 0.754178804 0.754178803 0.754178803 0 CG10376 FBtr0081128|FBtr0081128|FBtr0081128 18700604|18700604|18700604 18701626|18701626|18701626 2L - 18701307 18701334 3'utr CG10376 FlyBase G11433.1 CGCAATCGTTTAATGTGATACAACGAAA 6 18701322 0.680065494 5 6 35 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2L:18701307-18701334 7 CG10376 FBtr0081128|FBtr0081128|FBtr0081128 18700604|18700604|18700604 18701626|18701626|18701626 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 18701309 18701368 3'utr CG10376 FlyBase G8783.1 ATATAATCCATTTTCTAAAAGATTATTGAACGTACGCAATCGTTTAATGTGATACAACGA 5 18701322 0.977643299 4 5 39 1 0.698970004 0 0 0 5 0 0 5 2L:18701309-18701368 7 4.5 330 FBgn0032702 2337.326667 113.6933333 174.6866667 0.001925276 0.039580157 0.025760409 1 1 1 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 2L 18701559 18701565 - 2L_18701559_18701565_- 0.782911824 0.782911434 0.782911629 2.83E-07 CG10376 FBtr0081128 18700604 18701626 2L - 18701546 18701587 3'utr CG10376 FlyBase G11434.1 CGCCTTGGGATGGGTTAATTTTGTACAAATTCAAAGCAACTT 10 18701568 0.925135535 5 8 87 0.923076923 0.77815125 0.076923077 0.2 0.384615385 10 0 1 12 2L:18701546-18701587 7 CG10376 FBtr0081128 18700604 18701626 GTACAAA 7mer-A1 dme-miR-305-5p 2L - 18701555 18701591 3'utr CG10376 FlyBase G8784.1 TACCCGCCTTGGGATGGGTTAATTTTGTACAAATTCA 6 18701567 0.917906071 3 5 48 1 0.84509804 0.428571429 0.166666667 0.285714286 6 0 0 7 2L:18701555-18701591 7 6.5 331 FBgn0032702 2337.326667 113.6933333 174.6866667 0.002780955 0.057171338 0.03720948 3 2 2.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 18704413 18704419 + 2L_18704413_18704419_+ 0.754174043 0.754170278 0.754172161 2.62E-06 CG10343 FBtr0081098|FBtr0081098|FBtr0081098 18704335|18704335|18704335 18704454|18704454|18704454 2L + 18704368 18704427 3'utr CG10343 FlyBase G5115.1 CATCGAGGAAACCTTAAATTGAAATCAAAAGCCAATACTATTTTATGTGATAGAATAAAC 13 18704409 0.975584137 4 11 100 0.857142857 1.079181246 0.142857143 0.076923077 0.142857143 13 2 0 12 2L:18704368-18704427 7 CG10343 FBtr0081098|FBtr0081098|FBtr0081098 18704335|18704335|18704335 18704454|18704454|18704454 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 18704372 18704452 3'utr CG10343 FlyBase G3989.1 GAGGAAACCTTAAATTGAAATCAAAAGCCAATACTATTTTATGTGATAGAATAAACGCGAGTAACTGCATGGGCGGCTATC 7 18704409 0.98105319 4 7 43 1 1 0 0.428571429 0.6 7 0 0 10 2L:18704372-18704452 7 7 332 FBgn0032703 216.33 32.94333333 50.78 0.032357972 0.212486087 0.137849547 4 4 4 0.1 dme-miR-184-3p 6mer3-8 TCCGTC 2L 18706203 18706208 - 2L_18706203_18706208_- 0.99999525 0.998234414 0.999114832 0.001245074 Faf FBtr0343115 18706008 18706532 2L - 18706175 18706235 3'utr Faf FlyBase G11451.1 CGTTGTTATGTTAGCTGTACTTATACTTCCGTCTATTTAACGAATAATAGAGGCACATTCT 12 18706209 0.990508639 6 12 124 1 1.230448921 0.058823529 0.333333333 0.529411765 12 0 0 17 2L:18706175-18706235 6 Faf FBtr0343115 18706008 18706532 TCCGTC 6mer3-8 dme-miR-184-3p 2L - 18706197 18706228 3'utr Faf FlyBase G8798.1 ATGTTAGCTGTACTTATACTTCCGTCTATTTA 8 18706209 0.789001306 2 8 82 1 1.079181246 0 0.375 0.583333333 8 0 0 12 2L:18706197-18706228 6 9 333 FBgn0025608 1253.34 66.89333333 102.5866667 0.007180813 0.134542555 0.087730699 1 1 1 0.1 dme-bantam-3p 6mer3-8 TGATCT 2L 18706342 18706347 - 2L_18706342_18706347_- 0.999999997 0.999998928 0.999999462 7.78E-07 Faf FBtr0343115 18706008 18706532 2L - 18706325 18706360 3'utr Faf FlyBase G11452.1 TAGGTTGATTCTCTGATCTGCCCAACACCATCAACC 6 18706344 0.727158865 3 6 36 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2L:18706325-18706360 6 Faf FBtr0343115 18706008 18706532 TGATCT 6mer3-8 dme-bantam-3p 2L - 18706322 18706359 3'utr Faf FlyBase G8799.1 AGGTTGATTCTCTGATCTGCCCAACACCATCAACCAAC 5 18706342 0.964017397 2 5 27 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 2L:18706322-18706359 6 5.5 334 FBgn0025608 1253.34 66.89333333 102.5866667 0.004388275 0.08222045 0.053613205 -3 -5 -4 0.1 dme-miR-980-3p 6mer3-8 GGCAGC 2L 18711278 18711283 - 2L_18711278_18711283_- 0.999998964 1 0.999999482 7.07E-07 Irk3 FBtr0081125|FBtr0343114 18711069|18711069 18711336|18711336 2L - 18711248 18711297 3'utr Irk3 FlyBase G11464.1 CGCATTACACTTTTGGCAGCACTATATTAATAACGAATTCAAAAACATTT 8 18711284 0.988187978 3 7 62 1 0.954242509 0 0.125 0.222222222 8 0 0 9 2L:18711248-18711297 6 Irk3 FBtr0081125|FBtr0343114 18711069|18711069 18711336|18711336 GGCAGC 6mer3-8 dme-miR-980-3p 2L - 18711262 18711297 3'utr Irk3 FlyBase G8807.1 CGCATTACACTTTTGGCAGCACTATATTAATAACGA 5 18711284 0.950480016 2 4 32 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2L:18711262-18711297 6 5 335 FBgn0032706 11.00333333 0.756666667 1.173333333 0.454407755 6.607929515 4.261363636 1 1 1 0.1 dme-miR-1008-3p 6mer3-8 AGCTGT 2L 18833929 18833934 - 2L_18833929_18833934_- 0.986935886 0.929023006 0.957979446 0.040950604 CG10600 FBtr0273228|FBtr0081120|FBtr0331194 18833708|18833708|18833708 18834497|18834497|18834497 2L - 18833915 18833962 3'utr CG10600 FlyBase G11474.1 AAGTTTTTTAATGCAGGCTGGTACACTGAGCTGTTATAGTGTGTATTT 5 18833936 0.9850188 3 4 39 0.8 0.602059991 0.2 0 0 5 1 0 4 2L:18833915-18833962 6 CG10600 FBtr0331194|FBtr0081120|FBtr0273228 18833708|18833708|18833708 18834497|18834497|18834497 AGCTGT 6mer3-8 dme-miR-1008-3p 2L - 18833916 18833962 3'utr CG10600 FlyBase G8816.1 AAGTTTTTTAATGCAGGCTGGTACACTGAGCTGTTATAGTGTGTATT 9 18833937 0.805101533 6 9 66 1 1.041392685 0.090909091 0.111111111 0.272727273 9 0 0 11 2L:18833916-18833962 6 5 336 FBgn0032717 1261.5 29.36666667 45.24666667 0.003963535 0.170261067 0.110505378 2 3 2.5 0.1 dme-miR-283-5p 6mer2-7 GATATT 2L 18834198 18834203 - 2L_18834198_18834203_- 1 1 1 0 CG10600 FBtr0273228|FBtr0081120|FBtr0331194 18833708|18833708|18833708 18834497|18834497|18834497 2L - 18834178 18834256 3'utr CG10600 FlyBase G11476.1 GCAGGAGTCGCTATTATACCATTTATTTTGAAAATTGTTATTCCTTGTTCTGCGATATTGAGCAGCCACAGTTTTGTGC 23 18834208 0.990206449 8 22 221 0.962962963 1.414973348 0.296296296 0.173913043 0.296296296 23 1 0 26 2L:18834178-18834256 6 CG10600 FBtr0331194|FBtr0081120|FBtr0273228 18833708|18833708|18833708 18834497|18834497|18834497 GATATT 6mer2-7 dme-miR-283-5p 2L - 18834183 18834226 3'utr CG10600 FlyBase G8818.1 AAAATTGTTATTCCTTGTTCTGCGATATTGAGCAGCCACAGTTT 18 18834208 0.991854551 4 14 163 0.878787879 0.860338007 0.090909091 0.555555556 0.757575758 18 1 3 29 2L:18834183-18834226 6 17.5 337 FBgn0032717 1261.5 29.36666667 45.24666667 0.013872374 0.595913734 0.386768823 5 5 5 0.1 dme-bantam-3p 7mer-A1 GATCTCA 2L 18834354 18834360 - 2L_18834354_18834360_- 0.823348831 0.821613875 0.822481353 0.00122676 CG10600 FBtr0273228|FBtr0081120|FBtr0331194 18833708|18833708|18833708 18834497|18834497|18834497 2L - 18834334 18834394 3'utr CG10600 FlyBase G11477.1 AACGGATTTCGAGTAGCTGAATCCTTTAAAGGAAGATCTCAACTCTGAAAGGGATTTCAAT 25 18834371 0.670145898 10 25 145 1 1.477121255 0.066666667 0.16 0.3 25 0 0 30 2L:18834334-18834394 7 CG10600 FBtr0331194|FBtr0081120|FBtr0273228 18833708|18833708|18833708 18834497|18834497|18834497 GATCTCA 7mer-A1 dme-bantam-3p 2L - 18834309 18834395 3'utr CG10600 FlyBase G8819.1 AAACGGATTTCGAGTAGCTGAATCCTTTAAAGGAAGATCTCAACTCTGAAAGGGATTTCAATACTTACTGAAGGTTGGCCATACAAT 21 18834373 0.930348484 9 18 128 0.766666667 0.662757832 0.1 0.333333333 0.533333333 21 3 4 23 2L:18834309-18834395 7 12.5 338 FBgn0032717 1261.5 29.36666667 45.24666667 0.009908839 0.425652667 0.276263445 11 13 12 0.1 dme-miR-282-5p 7mer-m8 AGAGGCT 2L 18834458 18834464 - 2L_18834458_18834464_- 0.63146322 0.631123647 0.631293433 0.000240133 CG10600 FBtr0273228|FBtr0081120|FBtr0331194 18833708|18833708|18833708 18834497|18834497|18834497 2L - 18834425 18834570 stop_codon CG10600 FlyBase G11478.1 CTCATCATCGACATCCTCGGCAACAACGAATAGTTCGCTCTCCTCTTACGCCGGTTCCAACAATAGCTTTTGAAACTGGGAAAAGAAATGGACGGAAAGCGAGAGTAGAGGCTCCTATTTGGACTTTATGTGAAACTATATATTTT 271 18834465 0.97438594 18 269 1661 0.993865031 2.51054501 0.457055215 0.162361624 0.303680982 271 2 0 324 2L:18834425-18834570 7 CG10600 FBtr0331194|FBtr0081120|FBtr0273228 18833708|18833708|18833708 18834497|18834497|18834497 AGAGGCT 7mer-m8 dme-miR-282-5p 2L - 18834419 18834523 stop_codon CG10600 FlyBase G8820.1 ACGCCGGTTCCAACAATAGCTTTTGAAACTGGGAAAAGAAATGGACGGAAAGCGAGAGTAGAGGCTCCTATTTGGACTTTATGTGAAACTATATATTTTGTAAAT 195 18834451 0.912020358 16 187 1261 0.964788732 1.960629308 0.461267606 0.317948718 0.531690141 195 8 2 274 2L:18834419-18834523 7 206 339 FBgn0032717 1261.5 29.36666667 45.24666667 0.163297662 7.014755959 4.552821571 1 -13 -6 0.1 dme-miR-317-3p 7mer-A1 GTGTTCA 2L 18951229 18951235 - 2L_18951229_18951235_- 0.823329033 0.817626984 0.820478008 0.004031923 Nedd8 FBtr0342928|FBtr0081192 18951004|18951145 18951240|18951240 2L - 18951217 18951300 stop_codon Nedd8 FlyBase G11525.1 GTTCTTCACTTGGTATTGGCTCTGCGAGGAGGTGATTCAATCCTAACACCTTGTGTGTAACTAGCGTGTTCATAAGTGGAAAAC 10 18951228 0.988259449 6 8 75 0.916666667 0.740362689 0.416666667 0.2 0.333333333 10 0 1 11 2L:18951217-18951300 7 Nedd8 FBtr0342928 18951004 18951240 GTGTTCA 7mer-A1 dme-miR-317-3p 2L - 18951171 18951242 stop_codon Nedd8 FlyBase G8850.1 AACTAGCGTGTTCATAAGTGGAAAACATTCATTTAAAATTCACTCAAATATATTAAGCTTGAGAAGCGTCAT 7 18951229 0.954417196 5 7 36 1 1 0.1 0.428571429 0.6 7 0 0 10 2L:18951171-18951242 7 4.5 340 FBgn0032725 237 52.96333333 80.68 0.018987342 0.084964441 0.055775905 -7 -6 -6.5 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 2L 18957924 18957930 - 2L_18957924_18957930_- 0.443117183 0.442350193 0.442733688 0.000542351 Nak FBtr0340325|FBtr0081187 18957730|18957898 18958299|18958299 2L - 18957907 18957952 3'utr Nak FlyBase G11531.1 ATTATATATTTATACAAAACTATGTGATTATACACCCACACCCAAT 28 18957923 0.971102071 3 28 172 1 1.556302501 0 0.285714286 0.444444444 28 0 0 36 2L:18957907-18957952 7 Nak FBtr0081187|FBtr0340325 18957898|18957730 18958299|18958299 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 18957907 18957945 3'utr Nak FlyBase G8855.1 ATTTATACAAAACTATGTGATTATACACCCACACCCAAT 21 18957923 0.972774494 4 20 122 0.966666667 1.161368002 0 0.285714286 0.5 21 0 1 29 2L:18957907-18957945 7 24.5 341 FBgn0015772 651.1433333 17.45333333 26.77666667 0.037626124 1.403743316 0.914975725 -7 -7 -7 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA 2L 18958064 18958069 - 2L_18958064_18958069_- 0.999984952 0.999993652 0.999989302 6.15E-06 Nak FBtr0340325|FBtr0081187 18957730|18957898 18958299|18958299 2L - 18957985 18958090 3'utr Nak FlyBase G11532.1 AATACCTATAACTGTTATTTAGTGCAAAAATTTAAACTAGTTTTAGAAGCGAAACATGTTTTAGAATTTATACAGTGCGTAAGTTTACCAAAGTTACATTTATTTT 21 18958072 0.985143957 8 20 171 0.96 1.380211242 0.04 0.19047619 0.32 21 1 0 24 2L:18957985-18958090 6 Nak FBtr0081187|FBtr0340325 18957898|18957730 18958299|18958299 GTGCAA 6mer3-8 dme-miR-92b-3p 2L - 18958058 18958096 3'utr Nak FlyBase G8856.1 AAGAACAATACCTATAACTGTTATTTAGTGCAAAAATTT 8 18958072 0.698491242 4 8 76 1 1.176091259 0 0.375 0.666666667 8 0 0 15 2L:18958058-18958096 6 11 342 FBgn0015772 651.1433333 17.45333333 26.77666667 0.016893362 0.630252101 0.410805428 3 3 3 0.1 dme-miR-14-3p 7mer-A1 AGACTGA 2L 18958258 18958264 - 2L_18958258_18958264_- 0.823320914 0.823290267 0.82330559 2.16E-05 Nak FBtr0340325|FBtr0081187 18957730|18957898 18958299|18958299 2L - 18958245 18958292 3'utr Nak FlyBase G11533.2 AGTGGGGCGAGACCATCAAGGAGACCTGAGACTGAGTGTTTCAAATTA 165 18958266 0.966311253 6 159 540 0.961904762 2.305351369 0.138095238 0.224242424 0.39047619 165 8 0 202 2L:18958245-18958292 7 Nak FBtr0081187|FBtr0340325 18957898|18957730 18958299|18958299 AGACTGA 7mer-A1 dme-miR-14-3p 2L - 18958246 18958292 3'utr Nak FlyBase G8858.1 AGTGGGGCGAGACCATCAAGGAGACCTGAGACTGAGTGTTTCAAATT 98 18958266 0.958550746 4 91 307 0.942857143 1.643452676 0.078571429 0.326530612 0.528571429 98 6 2 132 2L:18958246-18958292 7 129 343 FBgn0015772 651.1433333 17.45333333 26.77666667 0.198113063 7.391138273 4.817627287 2 2 2 0.1 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 18961469 18961476 - 2L_18961469_18961476_- 0.625362742 0.625357835 0.625360289 3.46E-06 Nak FBtr0340326|FBtr0081189 18960925|18961114 18962750|18962873 2L - 18961463 18961492 3'utr Nak FlyBase G11544.1 AATTGAAATGTTCAATTAGCTTTAATTACT 12 18961477 0.785599795 2 12 109 1 1.204119983 0.25 0.166666667 0.375 12 0 0 16 2L:18961463-18961492 8 Nak FBtr0081189|FBtr0340326 18961114|18960925 18962873|18962750 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 18961453 18961525 3'utr Nak FlyBase G8866.1 TGATCACTTTTGTTCTCTACACACAGACACACCAATTGAAATGTTCAATTAGCTTTAATTACTACTCTTGTTA 10 18961477 0.985264676 5 9 84 0.9375 1.176091259 0.0625 0.3 0.5625 10 1 0 15 2L:18961453-18961525 8 8.5 344 FBgn0015772 651.1433333 17.45333333 26.77666667 0.013053961 0.487012987 0.317440558 1 1 1 0.1 dme-miR-8-3p 7mer-m8 CAGTATT 2L 18977655 18977661 - 2L_18977655_18977661_- 0.661614526 0.661614297 0.661614411 1.41E-07 Swip-1 FBtr0340322 18977517 18978354 2L - 18977634 18977685 3'utr Swip-1 FlyBase G11555.2 AAAGTAAAACAATAAGTTTCGATTCAGTATTTCACGTTTAAAGTTAGCGATT 72 18977663 0.780386058 7 64 605 0.875 1.886490725 0.056818182 0.208333333 0.352272727 72 11 0 77 2L:18977634-18977685 7 Swip-1 FBtr0340322 18977517 18978354 CAGTATT 7mer-m8 dme-miR-8-3p 2L - 18977594 18977690 3'utr Swip-1 FlyBase G8872.1 AGCCTAAAGTAAAACAATAAGTTTCGATTCAGTATTTCACGTTTAAAGTTAGCGATTTAAGCAATACTAATGCGTTAAATACGAATACACAAGAAAA 69 18977663 0.98739128 9 65 564 0.944954128 1.53571597 0.082568807 0.449275362 0.651376147 69 4 2 103 2L:18977594-18977690 7 66 345 FBgn0032731 3016.77 219.0933333 334.6766667 0.021877704 0.30124148 0.197205263 2 2 2 0.1 dme-miR-965-3p 7mer-m8 TACGCTT 2L 18978265 18978271 - 2L_18978265_18978271_- 0.619058197 0.619377348 0.619217773 0.000225638 Swip-1 FBtr0340322 18977517 18978354 2L - 18978156 18978317 3'utr Swip-1 FlyBase G11557.2 CTGGCGTAGGTTAATCGAATGTGGAACTAATCCCGGGAGAAGAGGATACGCTTCGTACAAGCATTTTTCAAGCATCACATACTCTAATTATATTCATACTTATCGCCCCATACATATAAAAACTCGATTTGCTGGCAAAAACATCTTGGGAATTGAATGTTA 752 18978287 0.85864425 31 706 2827 0.953810624 2.01389006 0.282909931 0.123670213 0.239030023 752 33 7 826 2L:18978156-18978317 7 Swip-1 FBtr0340322 18977517 18978354 TACGCTT 7mer-m8 dme-miR-965-3p 2L - 18978140 18978356 stop_codon Swip-1 FlyBase G8874.1 AGAGGACTTAGGTTCGCCCTTAGTCTAGCGAGTAATTATCTGGCGTAGGTTAATCGAATGTGGAACTAATCCCGGGAGAAGAGGATACGCTTCGTACAAGCATTTTTCAAGCATCACATACTCTAATTATATTCATACTTATCGCCCCATACATATAAAAACTCGATTTGCTGGCAAAAACATCTTGGGAATTGAATGTTATCTTTGACTAATGTTT 420 18978287 0.86937726 31 400 1625 0.957841484 2.055378331 0.291736931 0.302380952 0.505902192 420 21 4 568 2L:18978140-18978356 7 301 346 FBgn0032731 3016.77 219.0933333 334.6766667 0.099775588 1.37384372 0.899375517 16 16 16 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 19008169 19008176 + 2L_19008169_19008176_+ 0.500119814 0.500112452 0.500116133 5.16E-06 CG31793 FBtr0340318|FBtr0081138 19008052|19008052 19008234|19008234 2L + 19008129 19008187 3'utr CG31793 FlyBase G5156.1 TCGTGGTCATAGATTCAGTTTTATAGAATACAAAACGTTTGTACTTAAGGGAGTAAAGC 19 19008168 0.797798843 3 19 146 1 1.342422681 0.045454545 0.157894737 0.272727273 19 0 0 22 2L:19008129-19008187 8 CG31793 FBtr0081138|FBtr0340318 19008052|19008052 19008234|19008234 GTACTTAA 8mer-A1 dme-miR-252-5p 2L + 19008131 19008187 3'utr CG31793 FlyBase G4010.1 GTGGTCATAGATTCAGTTTTATAGAATACAAAACGTTTGTACTTAAGGGAGTAAAGC 11 19008142 0.976547565 3 11 84 1 1.146128036 0.142857143 0.272727273 0.428571429 11 0 0 14 2L:19008131-19008187 8 8 347 FBgn0051793 240.37 6.446666667 9.863333333 0.033282024 1.240951396 0.811084826 1 27 14 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2L 19041185 19041191 + 2L_19041185_19041191_+ 0.671740732 0.671762706 0.671751719 1.56E-05 mib2 FBtr0336840|FBtr0336841|FBtr0081142 19041121|19041121|19041121 19041473|19041541|19041541 2L + 19041148 19041201 3'utr mib2 FlyBase G5180.1 AGCAAAGGCGGCAGGATCAGCAGCAATTCAAACAGCAACCAAAGTGGCTTGTAT 9 19041194 0.924647342 3 9 30 1 1 0 0.111111111 0.2 9 0 0 10 2L:19041148-19041201 7 mib2 FBtr0336840|FBtr0336841|FBtr0081142 19041121|19041121|19041121 19041473|19041541|19041541 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L + 19041176 19041212 3'utr mib2 FlyBase G4025.1 CAAACAGCAACCAAAGTGGCTTGTATATATACATACA 8 19041194 0.942204511 2 8 34 1 1 0 0.25 0.4 8 0 0 10 2L:19041176-19041212 7 8 348 FBgn0086442 1398.326667 43.78666667 67.22333333 0.005721124 0.182704019 0.119006297 -9 -9 -9 0.1 dme-miR-305-3p 6mer3-8 ATGTGC 2L 19041244 19041249 + 2L_19041244_19041249_+ 0.997896442 0.995811882 0.996854162 0.001473964 mib2 FBtr0336840|FBtr0336841|FBtr0081142 19041121|19041121|19041121 19041473|19041541|19041541 2L + 19041211 19041257 3'utr mib2 FlyBase G5181.1 CACAAAACAAACACACACTCACATTGCCGTGTCATGTGCAAATCGAA 6 19041235 0.959420325 4 6 30 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 2L:19041211-19041257 6 mib2 FBtr0336840|FBtr0336841|FBtr0081142 19041121|19041121|19041121 19041473|19041541|19041541 ATGTGC 6mer3-8 dme-miR-305-3p 2L + 19041227 19041269 3'utr mib2 FlyBase G4026.1 ACTCACATTGCCGTGTCATGTGCAAATCGAAATTATTATTTAT 6 19041235 0.784715718 4 5 37 0.714285714 0.698970004 0.285714286 0.166666667 0.285714286 6 2 0 5 2L:19041227-19041269 6 4 349 FBgn0086442 1398.326667 43.78666667 67.22333333 0.002860562 0.09135201 0.059503149 9 9 9 0.1 dme-miR-932-5p 7mer-A1 GAATTGA 2L 19069567 19069573 + 2L_19069567_19069573_+ 0.823349558 0.823349561 0.82334956 0 CG17343 FBtr0081151 19065246 19069673 2L + 19069535 19069593 3'utr CG17343 FlyBase G5242.1 TTGTGCTTTTTCGCGCACTGCAAGCGAAATTAGAATTGATCGTCGTAGTTCACTAATAT 37 19069570 0.7690261 7 33 303 0.886363636 1.290034611 0.068181818 0.162162162 0.295454545 37 4 1 39 2L:19069535-19069593 7 CG17343 FBtr0081151 19065246 19069673 GAATTGA 7mer-A1 dme-miR-932-5p 2L + 19069534 19069597 3'utr CG17343 FlyBase G4075.1 CTTGTGCTTTTTCGCGCACTGCAAGCGAAATTAGAATTGATCGTCGTAGTTCACTAATATATTT 30 19069570 0.730505974 7 29 235 0.96969697 1.505149978 0.060606061 0.1 0.181818182 30 1 0 32 2L:19069534-19069597 7 29.5 350 FBgn0032751 35 7.813333333 11.57333333 0.842857143 3.77559727 2.548963134 -3 -3 -3 0.1 dme-miR-14-3p 6mer2-7 AGACTG 2L 19069642 19069647 + 2L_19069642_19069647_+ 0.827705132 0.829547935 0.828626534 0.001303056 CG17343 FBtr0081151 19065246 19069673 2L + 19069615 19069663 3'utr CG17343 FlyBase G5243.1 ACCTCAATTAGTTGGTGCCAAACAGCCAGACTGTTAAATATAAGAATTC 84 19069648 0.668437311 4 82 375 0.970588235 1.995635195 0.029411765 0.19047619 0.333333333 84 3 0 99 2L:19069615-19069663 6 CG17343 FBtr0081151 19065246 19069673 AGACTG 6mer2-7 dme-miR-14-3p 2L + 19069620 19069665 3'utr CG17343 FlyBase G4076.1 AATTAGTTGGTGCCAAACAGCCAGACTGTTAAATATAAGAATTCTA 60 19069648 0.66357283 5 60 263 1 1.924279286 0.071428571 0.316666667 0.511904762 60 0 0 84 2L:19069620-19069665 6 71.5 351 FBgn0032751 35 7.813333333 11.57333333 2.042857143 9.151023891 6.177995392 -6 -6 -6 0.1 dme-miR-1008-3p 6mer3-8 AGCTGT 2L 19172049 19172054 + 2L_19172049_19172054_+ 0.972639038 0.650160075 0.811399557 0.228027017 brat FBtr0081159|FBtr0344846|FBtr0081160 19171258|19171258|19171258 19172567|19172567|19179758 2L + 19171911 19172183 5'utr brat FlyBase G5277.1 AACCGCCAACAAAATGGAGCCGCGTATCGAGCATTAATTAATTAATAATTGATTGTAATTTTTAGATATATGATTGCGCAAATTGTTTGTTATTATTATTTTTGATTGCATAAACATTTGATACATTATATATTATATAGCTGTTTTTTACGTTTATAAATTATTTTTGATTATACCACTTATTGATTACTGATTATTTATATTTATATACATTAATTAATTATCCTCTAAGACATGTTTGCTACTTTTATACGAAATCAACCGAACCCAAAA 121 19172058 0.999927854 45 112 1283 0.917808219 1.649983544 0.095890411 0.173553719 0.315068493 121 10 2 134 2L:19171911-19172183 6 brat FBtr0081159|FBtr0344846|FBtr0081160 19171258|19171258|19171258 19172567|19172567|19179758 AGCTGT 6mer3-8 dme-miR-1008-3p 2L + 19172008 19172183 5'utr brat FlyBase G4105.1 ATTTTTGATTGCATAAACATTTGATACATTATATATTATATAGCTGTTTTTTACGTTTATAAATTATTTTTGATTATACCACTTATTGATTACTGATTATTTATATTTATATACATTAATTAATTATCCTCTAAGACATGTTTGCTACTTTTATACGAAATCAACCGAACCCAAAA 60 19172058 0.994298124 19 50 689 0.83908046 1.562292864 0.08045977 0.333333333 0.540229885 60 13 1 73 2L:19172008-19172183 6 34 352 FBgn0010300 4742.333333 86.64666667 133.0666667 0.007169467 0.392398246 0.255511022 -9 -9 -9 0.1 dme-miR-8-3p 6mer2-7 AGTATT 2L 19172669 19172674 + 2L_19172669_19172674_+ 0.999999952 1.000000001 0.999999977 0 brat FBtr0081160 19171258 19179758 2L + 19172635 19172683 3'utr brat FlyBase G5280.1 GTATCTTGAGGATGTGTGTGCATAGATCTAATTGAGTATTTAAAAGTAA 12 19172666 0.798441665 7 12 98 1 1.255272505 0.111111111 0.25 0.5 12 0 0 18 2L:19172635-19172683 6 brat FBtr0081160 19171258 19179758 AGTATT 6mer2-7 dme-miR-8-3p 2L + 19172630 19172684 3'utr brat FlyBase G4109.1 TCAAAGTATCTTGAGGATGTGTGTGCATAGATCTAATTGAGTATTTAAAAGTAAC 12 19172652 0.670140593 6 12 100 1 1.397940009 0.36 0.666666667 0.84 12 0 0 25 2L:19172630-19172684 6 4.5 353 FBgn0010300 4742.333333 86.64666667 133.0666667 0.0009489 0.051935062 0.033817635 3 17 10 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2L 19172714 19172719 + 2L_19172714_19172719_+ 0.966468816 0.999982601 0.983225708 0.023697835 brat FBtr0081160 19171258 19179758 2L + 19172688 19172735 3'utr brat FlyBase G5281.1 TAACTAAAAGTTGGCAATCAGCGCAGAAGACTTGAAACATTTATAACT 56 19172705 0.896557466 5 47 194 0.885245902 1.431363764 0.049180328 0.089285714 0.163934426 56 6 1 54 2L:19172688-19172735 6 brat FBtr0081160 19171258 19179758 AAGACT 6mer3-8 dme-miR-14-3p 2L + 19172693 19172746 3'utr brat FlyBase G4110.1 AAAAGTTGGCAATCAGCGCAGAAGACTTGAAACATTTATAACTATTATAATTAT 47 19172705 0.929431339 6 43 158 0.917808219 1.348953548 0.04109589 0.404255319 0.616438356 47 4 2 67 2L:19172693-19172746 6 49.5 354 FBgn0010300 4742.333333 86.64666667 133.0666667 0.0104379 0.571285681 0.371993988 9 9 9 0.1 dme-miR-980-5p 6mer2-7 AAAAAC 2L 19173437 19173442 + 2L_19173437_19173442_+ 0.582626733 0.809141849 0.695884291 0.160170363 brat FBtr0081160 19171258 19179758 2L + 19173391 19173485 3'utr brat FlyBase G5287.1 GTTTCCCCCCTTCCTCATCCTCTTTATATTCCCTTGTTTGTTTTGAAAAAACGCCTTGCTCTGTGTAATTTCTGATTTGCTTGACCTATTATTTT 31 19173450 0.910840651 17 31 304 1 1.612783857 0.146341463 0.258064516 0.43902439 31 0 0 41 2L:19173391-19173485 6 brat FBtr0081160 19171258 19179758 AAAAAC 6mer2-7 dme-miR-980-5p 2L + 19173414 19173490 3'utr brat FlyBase G4116.1 TTATATTCCCTTGTTTGTTTTGAAAAAACGCCTTGCTCTGTGTAATTTCTGATTTGCTTGACCTATTATTTTAATTA 21 19173447 0.98803532 11 20 180 0.896551724 1.414973348 0.137931034 0.285714286 0.482758621 21 3 0 26 2L:19173414-19173490 6 14.5 355 FBgn0010300 4742.333333 86.64666667 133.0666667 0.003057567 0.167346311 0.108967936 -13 -10 -11.5 0.1 dme-miR-304-5p 8mer-A1 TGAGATTA 2L 19173529 19173536 + 2L_19173529_19173536_+ 0.612839811 0.438269803 0.525554807 0.123439631 brat FBtr0081160 19171258 19179758 2L + 19173494 19173548 3'utr brat FlyBase G5288.1 GATAATTACCTATGTTTTGTGTGTATCTACTTAAGTGAGATTATTAAATATACGA 23 19173528 0.969755715 8 21 212 0.923076923 1.380211242 0.038461538 0.086956522 0.192307692 23 2 0 24 2L:19173494-19173548 8 brat FBtr0081160 19171258 19179758 TGAGATTA 8mer-A1 dme-miR-304-5p 2L + 19173507 19173549 3'utr brat FlyBase G4117.1 GTTTTGTGTGTATCTACTTAAGTGAGATTATTAAATATACGAA 22 19173528 0.748183524 6 18 181 0.848484848 1.447158031 0.03030303 0.363636364 0.575757576 22 5 0 28 2L:19173507-19173549 8 20.5 356 FBgn0010300 4742.333333 86.64666667 133.0666667 0.004322767 0.23659306 0.154058116 1 1 1 0.1 dme-miR-2b-2-5p 7mer-m8 TTGAAGA 2L 19173609 19173615 + 2L_19173609_19173615_+ 0.631305173 0.382914766 0.507109969 0.175638536 brat FBtr0081160 19171258 19179758 2L + 19173562 19173707 3'utr brat FlyBase G5289.1 AGTTCTTTCTTGTTGTAATCTTAATTGACTTTAATCGACCTATTGTATTGAAGATTAATGTATCGATGTAATGGTAGCTGTAATAACGACAAAGGGTTTAAACAAAGTATTGTACGTTTTCTGTGTGAGAAACACTTTTTACTTGA 85 19173633 0.985533348 20 80 657 0.932692308 1.986771734 0.298076923 0.211764706 0.355769231 85 7 0 97 2L:19173562-19173707 7 brat FBtr0081160 19171258 19179758 TTGAAGA 7mer-m8 dme-miR-2b-2-5p 2L + 19173580 19173676 3'utr brat FlyBase G4118.1 TCTTAATTGACTTTAATCGACCTATTGTATTGAAGATTAATGTATCGATGTAATGGTAGCTGTAATAACGACAAAGGGTTTAAACAAAGTATTGTAC 63 19173633 0.828407953 13 61 484 0.952380952 1.903089987 0.273809524 0.253968254 0.44047619 63 4 0 80 2L:19173580-19173676 7 35 357 FBgn0010300 4742.333333 86.64666667 133.0666667 0.007380333 0.403939371 0.263026052 -24 -24 -24 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 2L 19174189 19174194 + 2L_19174189_19174194_+ 0.602031037 0.952706535 0.777368786 0.247965024 brat FBtr0081160|FBtr0081160 19171258|19171258 19179758|19179758 2L + 19174136 19174208 3'utr brat FlyBase G5293.1 CAACCCAACAACAAATGCCACAAAAACCAACTGAAAAACCATTAAAGATTTTATACTTATTCTGATAAAAAGA 10 19174195 0.999834673 8 10 53 1 1.079181246 0.166666667 0.2 0.333333333 10 0 0 12 2L:19174136-19174208 6 brat FBtr0081160|FBtr0081160 19171258|19171258 19179758|19179758 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 2L + 19174140 19174199 3'utr brat FlyBase G4121.1 CCAACAACAAATGCCACAAAAACCAACTGAAAAACCATTAAAGATTTTATACTTATTCTG 8 19174177 0.962709418 6 8 40 1 1 0.2 0.25 0.4 8 0 0 10 2L:19174140-19174199 6 4.5 358 FBgn0010300 4742.333333 86.64666667 133.0666667 0.0009489 0.051935062 0.033817635 -6 12 3 0.1 dme-miR-14-3p 6mer2-7 AGACTG 2L 19174483 19174488 + 2L_19174483_19174488_+ 0.877620527 0.709705071 0.793662799 0.118734118 brat FBtr0081160 19171258 19179758 2L + 19174464 19174502 3'utr brat FlyBase G5294.1 GATGAATTGAGAATCTAATAGACTGTGCAACCACAAAAA 46 19174482 0.891133762 5 44 235 0.96 1.380211242 0 0.086956522 0.16 46 1 1 48 2L:19174464-19174502 6 brat FBtr0081160 19171258 19179758 AGACTG 6mer2-7 dme-miR-14-3p 2L + 19174459 19174503 3'utr brat FlyBase G4122.1 AAATTGATGAATTGAGAATCTAATAGACTGTGCAACCACAAAAAT 40 19174489 0.960105864 5 35 205 0.876923077 1.056904851 0 0.45 0.661538462 40 4 4 57 2L:19174459-19174503 6 42.5 359 FBgn0010300 4742.333333 86.64666667 133.0666667 0.008961833 0.490497807 0.319388778 1 -6 -2.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 19177915 19177922 + 2L_19177915_19177922_+ 0.63113665 0.631136618 0.631136634 0 brat FBtr0336627|FBtr0081160 19177522|19171258 19179758|19179758 2L + 19177881 19177935 3'utr brat FlyBase G5295.1 ATATAGTGCAACTAAGCCGATCATGGTATCATCATCTAGTCATCATGCATACATA 17 19177912 0.980899443 7 17 122 1 1.380211242 0.041666667 0.352941176 0.541666667 17 0 0 24 2L:19177881-19177935 8 brat FBtr0336627|FBtr0081160 19177522|19171258 19179758|19179758 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L + 19177876 19177930 3'utr brat FlyBase G4123.1 ACGCTATATAGTGCAACTAAGCCGATCATGGTATCATCATCTAGTCATCATGCAT 8 19177915 0.981039364 3 8 58 1 1.176091259 0 0.625 0.8 8 0 0 15 2L:19177876-19177930 8 11.5 360 FBgn0010300 4742.333333 86.64666667 133.0666667 0.002424967 0.132722936 0.086422846 3 0 1.5 0.1 dme-miR-92b-3p 7mer-m8 GTGCAAT 2L 19179882 19179888 - 2L_19179882_19179888_- 0.633253371 0.651568505 0.642410938 0.012950731 CG17568 FBtr0081233 19179747 19179946 2L - 19179873 19179901 3'utr CG17568 FlyBase G11636.1 ATCAGATAGGAATGTGCAATCTCAAATTT 13 19179888 0.799746802 2 11 70 0.933333333 0.84509804 0.133333333 0.153846154 0.266666667 13 0 1 14 2L:19179873-19179901 7 CG17568 FBtr0081233 19179747 19179946 GTGCAAT 7mer-m8 dme-miR-92b-3p 2L - 19179872 19179905 3'utr CG17568 FlyBase G8935.1 TGGCATCAGATAGGAATGTGCAATCTCAAATTTT 8 19179888 0.79263559 3 7 44 1 1.113943352 0.076923077 0.375 0.615384615 8 0 0 13 2L:19179872-19179905 7 9.5 361 FBgn0032763 137.99 9.22 14.17666667 0.068845569 1.030368764 0.670115213 0 0 0 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2L 19189662 19189668 + 2L_19189662_19189668_+ 0.823346619 0.821971075 0.822658847 0.000972625 pigeon FBtr0302561|FBtr0081194 19189305|19189584 19189938|19189938 2L + 19189596 19189861 3'utr pigeon FlyBase G5309.1 AAGAGTAACTAATGAAGTATTGTGTCAAATTATCAAGTACTTAGCCAAGGCCAGTTTGCAAATATTCCAAAGATTTGATTTGTCAAATGTATTAGTTAAGATTCTTCTCGTGCAGCTTTGATTTTTGTTAGGGTTCTTCTGTGTGCTTTTAGTATTAATTTTCTGTTCCTATTATTTGTGTAACGACTGATACACATTCCAAGTCTGTAATTATAAATTATTTATGTTGTTAATTGATGTACCTAAAATCATGTACGTATTTATAT 326 19189660 0.837831772 58 307 3172 0.950904393 1.611605309 0.124031008 0.165644172 0.297157623 326 11 8 368 2L:19189596-19189861 7 pigeon FBtr0302561|FBtr0081194 19189305|19189584 19189938|19189938 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2L + 19189639 19189675 3'utr pigeon FlyBase G4130.2 GCCAAGGCCAGTTTGCAAATATTCCAAAGATTTGATT 44 19189660 0.847628176 4 43 299 1 1.812913357 0.338461538 0.325581395 0.553846154 43 0 0 65 2L:19189639-19189675 7 73.5 362 FBgn0010309 154.9266667 5.81 8.776666667 0.474418004 12.65060241 8.374477782 2 2 2 0.1 dme-miR-283-5p 6mer3-8 TGATAT 2L 19338722 19338727 - 2L_19338722_19338727_- 0.844369156 0.99369232 0.919030738 0.105587377 dnt FBtr0336820|FBtr0081224 19338667|19338676 19339164|19339164 2L - 19338708 19338756 3'utr dnt FlyBase G11640.1 AATTTACCGTTTATACGAGAGATCAAACATGATATACAAATATATACAC 30 19338734 0.971582474 4 29 191 0.96875 1.491361694 0.1875 0.066666667 0.125 30 1 0 31 2L:19338708-19338756 6 dnt FBtr0336820|FBtr0081224 19338667|19338676 19339164|19339164 TGATAT 6mer3-8 dme-miR-283-5p 2L - 19338712 19338749 3'utr dnt FlyBase G8940.1 CGTTTATACGAGAGATCAAACATGATATACAAATATAT 15 19338734 0.949903851 3 15 73 1 1.342422681 0.136363636 0.4 0.590909091 15 0 0 22 2L:19338712-19338749 6 22 363 FBgn0024245 411 18.84333333 28.87333333 0.053527981 1.16752167 0.761948742 7 7 7 0.1 dme-miR-283-5p 8mer-m1 TGATATTT 2L 19338842 19338849 - 2L_19338842_19338849_- 0.555593841 0.555571149 0.555582495 1.61E-05 dnt FBtr0336820|FBtr0081224 19338667|19338676 19339164|19339164 2L - 19338827 19338881 3'utr dnt FlyBase G11641.1 CTAGCTAAAACAAAGGCCGAAATCAAATATAGTGATATTTATAAATAGAGATAGC 26 19338853 0.824696096 8 22 194 0.866666667 1.414973348 0.133333333 0.153846154 0.266666667 26 4 0 26 2L:19338827-19338881 8 dnt FBtr0336820|FBtr0081224 19338667|19338676 19339164|19339164 TGATATTT 8mer-m1 dme-miR-283-5p 2L - 19338831 19338869 3'utr dnt FlyBase G8941.1 AAGGCCGAAATCAAATATAGTGATATTTATAAATAGAGA 11 19338853 0.850910768 3 9 80 0.882352941 0.698970004 0.235294118 0.454545455 0.647058824 11 0 2 15 2L:19338831-19338869 8 16.5 364 FBgn0024245 411 18.84333333 28.87333333 0.040145985 0.875641252 0.571461556 4 4 4 0.1 dme-miR-318-3p 8mer-A1 CCCAGTGA 2L 19390517 19390524 - 2L_19390517_19390524_- 0.677990052 0.678004121 0.677997086 9.90E-06 CG17544 FBtr0081216|FBtr0300822|FBtr0081218|FBtr0081217 19390368|19390368|19390368|19390368 19390668|19390668|19390668|19390668 2L - 19390510 19390542 3'utr CG17544 FlyBase G11650.1 ATGGCCAACTACATTGATCCCAGTGAAAGGTTT 12 19390529 0.694743677 2 12 61 1 1.113943352 0.153846154 0.083333333 0.153846154 12 0 0 13 2L:19390510-19390542 8 CG17544 FBtr0081217|FBtr0081218|FBtr0300822|FBtr0081216 19390368|19390368|19390368|19390368 19390668|19390668|19390668|19390668 CCCAGTGA 8mer-A1 dme-miR-318-3p 2L - 19390507 19390541 3'utr CG17544 FlyBase G8947.1 TGGCCAACTACATTGATCCCAGTGAAAGGTTTTTT 8 19390528 0.679659964 2 7 48 0.9 0.653212514 0 0.125 0.3 8 0 1 9 2L:19390507-19390541 8 10 365 FBgn0032775 1454.426667 69.89666667 107.4566667 0.006875562 0.143068339 0.093060769 5 4 4.5 0.1 dme-miR-31a-5p 8mer-A1 TCTTGCCA 2L 19429101 19429108 + 2L_19429101_19429108_+ 0.631136186 0.631133393 0.631134789 1.98E-06 CG16771 FBtr0334164|FBtr0302874|FBtr0302938|FBtr0334165|FBtr0081204 19429037|19429037|19429037|19429037|19429037 19429224|19429224|19429224|19429224|19429224 2L + 19429057 19429161 3'utr CG16771 FlyBase G5315.1 AGCCAACAAAACACTTTGATATATGTAGTTATAATGAAAACTGTTCTTGCCAAGCTTACAAATTAGATATAAGTCAAAGATTGGGTCACCGAAATAGGACATGAG 42 19429100 0.974806979 13 40 272 0.97826087 1.653212514 0.260869565 0.095238095 0.173913043 42 1 0 45 2L:19429057-19429161 8 CG16771 FBtr0334165|FBtr0302938|FBtr0302874|FBtr0334164|FBtr0081204 19429037|19429037|19429037|19429037|19429037 19429224|19429224|19429224|19429224|19429224 TCTTGCCA 8mer-A1 dme-miR-31a-5p 2L + 19429056 19429114 3'utr CG16771 FlyBase G4133.1 TAGCCAACAAAACACTTTGATATATGTAGTTATAATGAAAACTGTTCTTGCCAAGCTTA 25 19429100 0.98478031 3 19 169 0.794117647 0.73239376 0.235294118 0.28 0.470588235 25 3 4 27 2L:19429056-19429114 8 23 366 FBgn0032779 937.25 47.39333333 72.85666667 0.024539877 0.485300324 0.315688338 1 1 1 0.1 dme-miR-79-3p 6mer3-8 TAGCTT 2L 1943248 1943253 + 2L_1943248_1943253_+ 0.998759055 0.999940866 0.999349961 0.000835659 CG7337 FBtr0309828|FBtr0333006|FBtr0110882|FBtr0113011|FBtr0113012|FBtr0077811|FBtr0110883|FBtr0333007 1942964|1942964|1942964|1942964|1942964|1942964|1942964|1942964 1943818|1943818|1943939|1944289|1943461|1943818|1943947|1943461 2L + 1943220 1943357 3'utr CG7337 FlyBase G1109.1 AATAATTTATATGTCAACCGATTGCGTTTAGCTTGAATTAAATTCTGTAAATGTTAAGTTTAATAAGCTTAATAGATTTATGTACGTGTTAAGTGTTATTTGAGTTTAAGGCGGAATGATACGGAATGACCGGACCGG 113 1943241 0.986544894 11 113 960 1 2.120573931 0.234848485 0.159292035 0.28030303 113 0 0 132 2L:1943220-1943357 6 CG7337 FBtr0110883|FBtr0333007|FBtr0113012|FBtr0077811|FBtr0110882|FBtr0113011|FBtr0309828|FBtr0333006 1942964|1942964|1942964|1942964|1942964|1942964|1942964|1942964 1943947|1943461|1943461|1943818|1943939|1944289|1943818|1943818 TAGCTT 6mer3-8 dme-miR-79-3p 2L + 1943219 1943302 3'utr CG7337 FlyBase G877.1 CAATAATTTATATGTCAACCGATTGCGTTTAGCTTGAATTAAATTCTGTAAATGTTAAGTTTAATAAGCTTAATAGATTTATGT 62 1943241 0.844787228 6 62 532 1 2.025305865 0.216981132 0.5 0.70754717 62 0 0 106 2L:1943219-1943302 6 75.5 367 FBgn0031374 1209.94 21.90666667 33.73666667 0.062399788 3.44643944 2.237921154 7 7 7 0.1 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 19435335 19435342 + 2L_19435335_19435342_+ 0.625363194 0.625364482 0.625363838 9.19E-07 Rab9 FBtr0081206 19435305 19435841 2L + 19435278 19435396 stop_codon Rab9 FlyBase G5327.1 AGGCGCCAGCCACCAATTATCGGCTATGAGCAGACAGACAGGAGCTGTCAGGAAACTTACGCTTAATTTAACCACTCACCCCGCCGGGTTGACCTTCAGATTCAATGCATTCCAGTCCG 230 19435334 0.980366963 11 226 1628 0.985185185 1.947760382 0.022222222 0.12173913 0.251851852 230 2 2 266 2L:19435278-19435396 8 Rab9 FBtr0081206 19435305 19435841 TACGCTTA 8mer-A1 dme-miR-965-3p 2L + 19435284 19435408 stop_codon Rab9 FlyBase G4142.1 CAGCCACCAATTATCGGCTATGAGCAGACAGACAGGAGCTGTCAGGAAACTTACGCTTAATTTAACCACTCACCCCGCCGGGTTGACCTTCAGATTCAATGCATTCCAGTCCGCGGAGGGGCAGG 104 19435334 0.979911182 11 100 697 0.966216216 2.155336037 0.060810811 0.307692308 0.513513514 104 5 0 143 2L:19435284-19435408 8 158.5 368 FBgn0032782 68.33333333 5.243333333 8.043333333 2.319512195 30.22886205 19.70576046 1 1 1 0.1 dme-bantam-3p 6mer2-7 GATCTC 2L 19435546 19435551 + 2L_19435546_19435551_+ 0.999999704 0.99999977 0.999999737 7.07E-08 Rab9 FBtr0081206 19435305 19435841 2L + 19435521 19435580 3'utr Rab9 FlyBase G5329.1 GAGCTAGCTTCTATGTCAAGAATAGGATCTCCATTTTTACTTGCTATGCTTTAATATTAT 26 19435555 0.692278769 9 24 201 0.894736842 1.531478917 0.078947368 0.346153846 0.552631579 26 4 0 34 2L:19435521-19435580 6 Rab9 FBtr0081206 19435305 19435841 GATCTC 6mer2-7 dme-bantam-3p 2L + 19435436 19435561 3'utr Rab9 FlyBase G4143.1 ACCCAATGTTGATGGCTGTAGAGAGTGGATTGCCTCGTTGTGGTTGATATTCTAAGGGAACTATGCTTCACAGCGAGCTAACTATGAGCTAGCTTCTATGTCAAGAATAGGATCTCCATTTTTACT 33 19435554 0.777402925 11 30 217 0.886792453 1.672097858 0.264150943 0.393939394 0.622641509 33 6 0 47 2L:19435436-19435561 6 16 369 FBgn0032782 68.33333333 5.243333333 8.043333333 0.234146341 3.051493961 1.989225031 -9 -8 -8.5 0.1 dme-miR-276a-3p 6mer3-8 AGTTCC 2L 19497418 19497423 + 2L_19497418_19497423_+ 1 0.999998421 0.999999211 1.13E-06 swm FBtr0081245|FBtr0331326|FBtr0081244|FBtr0331325 19497383|19497383|19497383|19497383 19497978|19497835|19497835|19497978 2L + 19497382 19497484 stop_codon swm FlyBase G5373.1 TGATCCATCGCCCTCCGCTGTTGAGGCGGCCGGGAAAGTTCCGTGGGGCTCACAAGTGTTAGGAAACCCTTAACATGTATTTGTTGTTATTCTATATCTAACT 27 19497424 0.966080544 12 27 167 1 1.491361694 0.096774194 0.074074074 0.193548387 27 0 0 31 2L:19497382-19497484 6 swm FBtr0081244|FBtr0331325|FBtr0081245|FBtr0331326 19497383|19497383|19497383|19497383 19497835|19497978|19497978|19497835 AGTTCC 6mer3-8 dme-miR-276a-3p 2L + 19497404 19497472 3'utr swm FlyBase G4177.1 GAGGCGGCCGGGAAAGTTCCGTGGGGCTCACAAGTGTTAGGAAACCCTTAACATGTATTTGTTGTTATT 12 19497421 0.974695135 5 11 76 0.941176471 1.204119983 0.117647059 0.333333333 0.529411765 12 1 0 16 2L:19497404-19497472 6 10.5 370 FBgn0002044 1462.05 43.20666667 66.00333333 0.007181697 0.243018053 0.159082875 -6 -3 -4.5 0.1 dme-miR-33-5p 7mer-A1 AATGCAA 2L 19497920 19497926 + 2L_19497920_19497926_+ 0.782911759 0.78291181 0.782911785 0 swm FBtr0081245|FBtr0331325 19497383|19497383 19497978|19497978 2L + 19497901 19497944 3'utr swm FlyBase G5376.1 AAAAAATCGTAGCAACGTGAATGCAAAACAGCAAGTTATATAGA 13 19497919 0.841590246 2 12 40 0.928571429 1.113943352 0.214285714 0.076923077 0.142857143 13 1 0 13 2L:19497901-19497944 7 swm FBtr0331325|FBtr0081245 19497383|19497383 19497978|19497978 AATGCAA 7mer-A1 dme-miR-33-5p 2L + 19497898 19497933 3'utr swm FlyBase G4178.1 AGAAAAAAATCGTAGCAACGTGAATGCAAAACAGCA 14 19497920 0.778568695 2 14 34 1 1.230448921 0.117647059 0.214285714 0.352941176 14 0 0 17 2L:19497898-19497933 7 13 371 FBgn0002044 1462.05 43.20666667 66.00333333 0.008891625 0.300879494 0.19695975 1 0 0.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 19502970 19502975 - 2L_19502970_19502975_- 0.999999173 0.999988648 0.999993911 7.50E-06 CG10188 FBtr0329963|FBtr0081283|FBtr0081282 19502333|19502333|19502333 19503098|19503128|19503128 2L - 19502956 19502999 3'utr CG10188 FlyBase G11737.1 ATGTACTTCCATACCTGTTGAACTGTACCTATACCATTCGAAAA 32 19502976 0.739775857 5 32 232 1 1.591064607 0.256410256 0.1875 0.333333333 32 0 0 39 2L:19502956-19502999 6 CG10188 FBtr0081282|FBtr0081283|FBtr0329963 19502333|19502333|19502333 19503128|19503128|19503098 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L - 19502957 19502998 3'utr CG10188 FlyBase G9023.1 TGTACTTCCATACCTGTTGAACTGTACCTATACCATTCGAAA 31 19502976 0.670337714 3 31 200 1 1.568201724 0.324324324 0.161290323 0.297297297 31 0 0 37 2L:19502957-19502998 6 27 372 FBgn0032796 423.2433333 9.72 14.90666667 0.06379309 2.777777778 1.811270125 1 1 1 0.1 dme-bantam-3p 6mer3-8 TGATCT 2L 19503022 19503027 - 2L_19503022_19503027_- 0.977876628 0.869584341 0.923730485 0.07657422 CG10188 FBtr0329963|FBtr0081283|FBtr0081282 19502333|19502333|19502333 19503098|19503128|19503128 2L - 19503002 19503063 3'utr CG10188 FlyBase G11738.1 GATATAAAAACCTTCTTGAAGTCATAACCGGAAGCCTGATCTTGGGCAATGAGGGGAACTGG 17 19503022 0.999722823 6 14 74 0.869565217 1 0.173913043 0.235294118 0.434782609 17 2 1 20 2L:19503002-19503063 6 CG10188 FBtr0081282|FBtr0081283|FBtr0329963 19502333|19502333|19502333 19503128|19503128|19503098 TGATCT 6mer3-8 dme-bantam-3p 2L - 19503015 19503046 3'utr CG10188 FlyBase G9024.1 GAAGTCATAACCGGAAGCCTGATCTTGGGCAA 9 19503021 0.749335943 3 7 27 0.909090909 1 0.090909091 0.111111111 0.272727273 9 1 0 10 2L:19503015-19503046 6 10.5 373 FBgn0032796 423.2433333 9.72 14.90666667 0.024808424 1.080246914 0.704382826 -5 -6 -5.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 19532732 19532739 + 2L_19532732_19532739_+ 0.631132577 0.631132285 0.631132431 2.12E-07 CG10137 FBtr0081248 19532669 19532985 2L + 19532716 19532751 3'utr CG10137 FlyBase G5389.1 TTATTAGAGCAACTATTCTAGTCAGGATACCTACTC 87 19532731 0.691852162 7 84 505 0.970588235 1.995635195 0.078431373 0.126436782 0.254901961 87 3 0 99 2L:19532716-19532751 8 CG10137 FBtr0081248 19532669 19532985 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L + 19532670 19532756 3'utr CG10137 FlyBase G4187.1 GAAAGCGTACACTTAATCGATCTATTGGCCTAGCGAATTAGCGAATTTATTAGAGCAACTATTCTAGTCAGGATACCTACTCAAGGA 53 19532731 0.974949412 6 51 318 0.977272727 1.934498451 0.113636364 0.433962264 0.659090909 53 2 0 86 2L:19532670-19532756 8 68 374 FBgn0032800 178.3133333 6.72 10.33 0.38135118 10.11904762 6.582768635 1 1 1 0.1 dme-miR-999-3p 6mer3-8 AGTTAA 2L 19536540 19536545 + 2L_19536540_19536545_+ 0.54671099 0.563220493 0.554965741 0.011673979 CG33116 FBtr0081249 19536464 19537363 2L + 19536510 19536575 3'utr CG33116 FlyBase G5399.2 AAGTTTTTCTGTATATCAAGGAGGCTGTTTAGTTAAACAATTCTTGTGAGATTATGTATAATTTGT 103 19536539 0.612808769 16 89 921 0.884297521 1.330413773 0.099173554 0.165048544 0.289256198 103 10 4 107 2L:19536510-19536575 6 CG33116 FBtr0081249 19536464 19537363 AGTTAA 6mer3-8 dme-miR-999-3p 2L + 19536428 19536574 stop_codon CG33116 FlyBase G4194.1 AGCCACAAGCGGAGGAGCCATTGAAGAAAGATATATAAGGCATCGGATTGCGCTATTTTGGATTAGTTGCGAGTTATTTTGCAAGTTTTTCTGTATATCAAGGAGGCTGTTTAGTTAAACAATTCTTGTGAGATTATGTATAATTTG 94 19536538 0.990349243 23 86 857 0.930555556 1.649983544 0.069444444 0.404255319 0.611111111 94 8 2 134 2L:19536428-19536574 6 72.5 375 FBgn0053116 946.2166667 45.74 70.24333333 0.076620929 1.585045912 1.032126418 1 2 1.5 0.1 dme-miR-7-5p 7mer-A1 TCTTCCA 2L 19536674 19536680 + 2L_19536674_19536680_+ 0.823318278 0.823341777 0.823330028 1.66E-05 CG33116 FBtr0081249 19536464 19537363 2L + 19536652 19536708 3'utr CG33116 FlyBase G5400.1 AATGACTATTCACGTAATGCTCTCTTCCAATGATAATTTTTAAACTCGGTTTACGGT 59 19536676 0.781261388 4 57 583 0.970149254 1.812913357 0.059701493 0.101694915 0.208955224 59 2 0 65 2L:19536652-19536708 7 CG33116 FBtr0081249 19536464 19537363 TCTTCCA 7mer-A1 dme-miR-7-5p 2L + 19536647 19536697 3'utr CG33116 FlyBase G4195.1 TTTCCAATGACTATTCACGTAATGCTCTCTTCCAATGATAATTTTTAAACT 24 19536676 0.917917245 4 23 225 0.971428571 1.531478917 0 0.25 0.485714286 24 1 0 34 2L:19536647-19536697 7 40 376 FBgn0053116 946.2166667 45.74 70.24333333 0.042273616 0.874508089 0.569449058 -2 -2 -2 0.1 dme-bantam-3p 6mer3-8 TGATCT 2L 19536803 19536808 + 2L_19536803_19536808_+ 1 0.999999824 0.999999912 1.41E-07 CG33116 FBtr0081249 19536464 19537363 2L + 19536718 19536866 3'utr CG33116 FlyBase G5401.1 ACTTGACGTTATCTGTAATCCGTATTGTATCCAAACTTCAAAGACCCCTTGTAGATCGATTGAATTTACGAGTAATCATGACAAGTGATCTAATCTGCTGCTAAGATATCCAATAAGTATTAGGTAGTAGGCTAAAGTAGCGGCCAGGC 43 19536803 0.978171313 14 43 294 1 1.748188027 0.25 0.279069767 0.446428571 43 0 0 56 2L:19536718-19536866 6 CG33116 FBtr0081249 19536464 19537363 TGATCT 6mer3-8 dme-bantam-3p 2L + 19536711 19536859 3'utr CG33116 FlyBase G4196.1 AATTCCCACTTGACGTTATCTGTAATCCGTATTGTATCCAAACTTCAAAGACCCCTTGTAGATCGATTGAATTTACGAGTAATCATGACAAGTGATCTAATCTGCTGCTAAGATATCCAATAAGTATTAGGTAGTAGGCTAAAGTAGCG 36 19536803 0.982036807 11 32 240 0.929824561 1.423245874 0.210526316 0.388888889 0.614035088 36 3 1 53 2L:19536711-19536859 6 29 377 FBgn0053116 946.2166667 45.74 70.24333333 0.030648372 0.634018365 0.412850567 0 0 0 0.1 dme-miR-79-3p 7mer-m8 TAGCTTT 2L 19536934 19536940 + 2L_19536934_19536940_+ 0.620203261 0.620202861 0.620203061 2.83E-07 CG33116 FBtr0081249 19536464 19537363 2L + 19536890 19536960 3'utr CG33116 FlyBase G5402.1 TTAACTTTGCAACTACAGAGCAGCTAACTACTTGTTCTAGCCTTTAGCTTTCCAACTTCATTGCTACGGTT 11 19536933 0.989966537 4 11 112 1 1.079181246 0 0.090909091 0.166666667 11 0 0 12 2L:19536890-19536960 7 CG33116 FBtr0081249 19536464 19537363 TAGCTTT 7mer-m8 dme-miR-79-3p 2L + 19536894 19536947 3'utr CG33116 FlyBase G4197.1 CTTTGCAACTACAGAGCAGCTAACTACTTGTTCTAGCCTTTAGCTTTCCAACTT 10 19536933 0.802010323 4 10 85 1 1.204119983 0 0.5 0.6875 10 0 0 16 2L:19536894-19536947 7 8 378 FBgn0053116 946.2166667 45.74 70.24333333 0.008454723 0.174901618 0.113889812 1 1 1 0.1 dme-miR-282-5p 6mer2-7 GAGGCT 2L 19580838 19580843 - 2L_19580838_19580843_- 0.999999615 0.999998856 0.999999236 4.95E-07 Hakai FBtr0081263|FBtr0081264 19580610|19580610 19581331|19581331 2L - 19580830 19580869 3'utr Hakai FlyBase G11778.1 CGCTGTTGGCCCAGGTGCCCTGATTGGAGGCTCCACCGAC 6 19580845 0.759629189 2 5 29 1 0.77815125 0.333333333 0 0 6 0 0 6 2L:19580830-19580869 6 Hakai FBtr0081264|FBtr0081263 19580610|19580610 19581331|19581331 GAGGCT 6mer2-7 dme-miR-282-5p 2L - 19580822 19580866 3'utr Hakai FlyBase G9051.1 TGTTGGCCCAGGTGCCCTGATTGGAGGCTCCACCGACGCGCCAAC 6 19580845 0.959170192 3 6 29 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2L:19580822-19580866 6 5 379 FBgn0032812 276.3333333 19.83333333 30.45 0.018094089 0.25210084 0.164203612 2 2 2 0.1 dme-miR-184-3p 6mer2-7 CCGTCC 2L 19581228 19581233 - 2L_19581228_19581233_- 0.951704338 0.992742843 0.97222359 0.029018602 Hakai FBtr0081263|FBtr0081264 19580610|19580610 19581331|19581331 2L - 19581210 19581360 stop_codon Hakai FlyBase G11779.1 GCAAGGCGAGTGGTAGCTATGGCTCCTAAACTAAGCTGTCCTGTCTATAAAAAAACAACCGCTTGCCCCTTGCAGCTCTCCGAGTCGTCTGTCCCCATATCCGTTTCCGCCTCCATTGCGTCCCGTCCCGTCCTGTCGCGGCTGCCACTGA 51 19581235 0.976629298 13 47 315 0.950819672 1.763427994 0.295081967 0.176470588 0.31147541 51 3 0 58 2L:19581210-19581360 6 Hakai FBtr0081264|FBtr0081263 19580610|19580610 19581331|19581331 CCGTCC 6mer2-7 dme-miR-184-3p 2L - 19581200 19581271 3'utr Hakai FlyBase G9052.1 TGTCCCCATATCCGTTTCCGCCTCCATTGCGTCCCGTCCCGTCCTGTCGCGGCTGCCACTGACCGGCGGTGT 20 19581235 0.973533567 7 19 115 0.96 1.079181246 0.24 0.2 0.36 20 0 1 24 2L:19581200-19581271 6 24.5 380 FBgn0032812 276.3333333 19.83333333 30.45 0.088661037 1.235294118 0.804597701 2 2 2 0.1 dme-miR-304-5p 7mer-m8 TGAGATT 2L 19586325 19586331 + 2L_19586325_19586331_+ 0.620193637 0.620173507 0.620183572 1.42E-05 CG10366 FBtr0081259 19586225 19586440 2L + 19586274 19586345 3'utr CG10366 FlyBase G5446.1 GTTTCCAAATTCGCCGTATGTTGTGTATTTATAGCTGTTTAAAGATATAGTTGAGATTGTTTTGCATACACT 14 19586324 0.990378153 4 13 138 0.944444444 0.929418926 0.055555556 0.214285714 0.388888889 14 0 1 17 2L:19586274-19586345 7 CG10366 FBtr0081259 19586225 19586440 TGAGATT 7mer-m8 dme-miR-304-5p 2L + 19586280 19586343 3'utr CG10366 FlyBase G4232.1 AAATTCGCCGTATGTTGTGTATTTATAGCTGTTTAAAGATATAGTTGAGATTGTTTTGCATACA 12 19586324 0.989172878 4 12 113 1 1.230448921 0.117647059 0.333333333 0.529411765 12 0 0 17 2L:19586280-19586343 7 11 381 FBgn0032814 191.6666667 11.32 17.29666667 0.057391304 0.971731449 0.635960686 1 1 1 0.1 dme-miR-8-3p 7mer-A1 AGTATTA 2L 19730291 19730297 + 2L_19730291_19730297_+ 0.752456217 0.818626017 0.785541117 0.046789114 Lar FBtr0331242|FBtr0112800|FBtr0331239|FBtr0331240|FBtr0081260|FBtr0331241|FBtr0305950 19730161|19730161|19730161|19730161|19730161|19730161|19730161 19732069|19732069|19731561|19731561|19731561|19731561|19731561 2L + 19730162 19730375 3'utr Lar FlyBase G5452.1 AGTGCATTTCTCAATGGGATTGCCAGGTCCACAGAGCTAAAATCTCATCGACCCTGCGTTCGTTGCATACTTATTTCGAACTCTACGCATAATACGCATTTACGATATACACGGATATCATAACTCTAAAGTATTATAGCCAGCTACTGCCCACACTTACTTAATACACCTATACTTATATACGTGGATATGTTTAGTTGATAAGCGCACCCCC 55 19730297 0.978948744 28 48 331 0.876923077 1.755874856 0.230769231 0.181818182 0.307692308 55 8 0 57 2L:19730162-19730375 7 Lar FBtr0305950|FBtr0081260|FBtr0331241|FBtr0331239|FBtr0331240|FBtr0331242|FBtr0112800 19730161|19730161|19730161|19730161|19730161|19730161|19730161 19731561|19731561|19731561|19731561|19731561|19732069|19732069 AGTATTA 7mer-A1 dme-miR-8-3p 2L + 19730161 19730331 stop_codon Lar FlyBase G4239.1 GAGTGCATTTCTCAATGGGATTGCCAGGTCCACAGAGCTAAAATCTCATCGACCCTGCGTTCGTTGCATACTTATTTCGAACTCTACGCATAATACGCATTTACGATATACACGGATATCATAACTCTAAAGTATTATAGCCAGCTACTGCCCACACTTACTTAATACACC 35 19730298 0.986041395 14 26 214 0.760869565 1.243038049 0.043478261 0.285714286 0.456521739 35 10 1 35 2L:19730161-19730331 7 24 382 FBgn0000464 569.28 8.026666667 12.27666667 0.042158516 2.990033223 1.954928048 -6 -7 -6.5 0.1 dme-miR-14-3p 7mer-m8 AAGACTG 2L 19730462 19730468 + 2L_19730462_19730468_+ 0.643641933 0.645854331 0.644748132 0.001564403 Lar FBtr0331242|FBtr0112800|FBtr0331239|FBtr0331240|FBtr0081260|FBtr0331241|FBtr0305950 19730161|19730161|19730161|19730161|19730161|19730161|19730161 19732069|19732069|19731561|19731561|19731561|19731561|19731561 2L + 19730392 19730506 3'utr Lar FlyBase G5453.1 ACCATTACGATTCTTTGGGGGACTCGATCTTATATATTGCGTTCTATTTTATTGATAATGTAAACTAAAGAAGACTGTTACACGTTTAATTATCAAAACCTTATATATCAACCCA 143 19730469 0.957709914 11 138 658 0.968253968 1.961421094 0.015873016 0.244755245 0.428571429 143 5 1 183 2L:19730392-19730506 7 Lar FBtr0305950|FBtr0081260|FBtr0331241|FBtr0331239|FBtr0331240|FBtr0331242|FBtr0112800 19730161|19730161|19730161|19730161|19730161|19730161|19730161 19731561|19731561|19731561|19731561|19731561|19732069|19732069 AAGACTG 7mer-m8 dme-miR-14-3p 2L + 19730391 19730507 3'utr Lar FlyBase G4240.1 TACCATTACGATTCTTTGGGGGACTCGATCTTATATATTGCGTTCTATTTTATTGATAATGTAAACTAAAGAAGACTGTTACACGTTTAATTATCAAAACCTTATATATCAACCCAC 103 19730469 0.962167997 12 99 509 0.962732919 2.190331698 0.031055901 0.427184466 0.633540373 103 6 0 155 2L:19730391-19730507 7 111 383 FBgn0000464 569.28 8.026666667 12.27666667 0.194983137 13.82890365 9.041542221 -7 -7 -7 0.1 dme-miR-970-3p 6mer2-7 CTTATG 2L 19730973 19730978 + 2L_19730973_19730978_+ 0.998525194 0.997861242 0.998193218 0.000469519 Lar FBtr0331242|FBtr0112800|FBtr0331239|FBtr0331240|FBtr0081260|FBtr0331241|FBtr0305950 19730161|19730161|19730161|19730161|19730161|19730161|19730161 19732069|19732069|19731561|19731561|19731561|19731561|19731561 2L + 19730880 19730995 3'utr Lar FlyBase G5456.2 CTTGCATAGCGCATATTTTATAAGGCAGCTAGATTCTAAAATTAGTTTTCAAACACAACTTACGTTTTGATCTCCCCGCAAAAGATGACGAACCTTATGGACTGATCGATGTCTTG 150 19730977 0.762559265 19 140 961 0.93989071 1.934498451 0.207650273 0.193333333 0.338797814 150 10 1 172 2L:19730880-19730995 6 Lar FBtr0305950|FBtr0081260|FBtr0331241|FBtr0331239|FBtr0331240|FBtr0331242|FBtr0112800 19730161|19730161|19730161|19730161|19730161|19730161|19730161 19731561|19731561|19731561|19731561|19731561|19732069|19732069 CTTATG 6mer2-7 dme-miR-970-3p 2L + 19730855 19730996 3'utr Lar FlyBase G4242.1 ACGGTCCGTGCAATTAGTCAAAAGTCTTGCATAGCGCATATTTTATAAGGCAGCTAGATTCTAAAATTAGTTTTCAAACACAACTTACGTTTTGATCTCCCCGCAAAAGATGACGAACCTTATGGACTGATCGATGTCTTGG 120 19730977 0.789540178 17 111 695 0.945054945 2.235528447 0.335164835 0.375 0.587912088 120 10 0 172 2L:19730855-19730996 6 66.5 384 FBgn0000464 569.28 8.026666667 12.27666667 0.116814221 8.284883721 5.416779799 -4 -4 -4 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 19731199 19731204 + 2L_19731199_19731204_+ 0.999997359 0.999991807 0.999994583 3.96E-06 Lar FBtr0331242|FBtr0112800|FBtr0331239|FBtr0331240|FBtr0081260|FBtr0331241|FBtr0305950 19730161|19730161|19730161|19730161|19730161|19730161|19730161 19732069|19732069|19731561|19731561|19731561|19731561|19731561 2L + 19731117 19731223 3'utr Lar FlyBase G5458.1 ATTCCTGTATATACCACAGTCGATACCCGAGCTAGCCACTTATGTATGTGTAATTTAGATTGAAAAGCTATGAAAAGTTATTGTACCTAAGGTGTATGAAGACATAG 35 19731198 0.898902249 8 33 235 0.95 1.278753601 0.425 0.142857143 0.25 35 1 1 38 2L:19731117-19731223 6 Lar FBtr0305950|FBtr0081260|FBtr0331241|FBtr0331239|FBtr0331240|FBtr0331242|FBtr0112800 19730161|19730161|19730161|19730161|19730161|19730161|19730161 19731561|19731561|19731561|19731561|19731561|19732069|19732069 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 19731122 19731226 3'utr Lar FlyBase G4244.1 TGTATATACCACAGTCGATACCCGAGCTAGCCACTTATGTATGTGTAATTTAGATTGAAAAGCTATGAAAAGTTATTGTACCTAAGGTGTATGAAGACATAGAGA 40 19731198 0.933378582 8 37 265 0.947368421 1.431363764 0.298245614 0.375 0.561403509 40 2 1 54 2L:19731122-19731226 6 25.5 385 FBgn0000464 569.28 8.026666667 12.27666667 0.044793423 3.176910299 2.077111051 1 1 1 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 2L 19736733 19736738 + 2L_19736733_19736738_+ 0.505990706 0.996327943 0.751159324 0.346720759 Nf-YB FBtr0081289|FBtr0081289|FBtr0343854|FBtr0343854 19736722|19736722|19736722|19736722 19737088|19737088|19736956|19736956 2L + 19736720 19736771 stop_codon Nf-YB FlyBase G5465.1 GTAACCCCTTTCTTACTTACCCTGTTAGTTAAGGTTCTTTTGACATTAAGGA 11 19736736 0.984569941 4 11 124 1 1.176091259 0.066666667 0.363636364 0.533333333 11 0 0 15 2L:19736720-19736771 6 Nf-YB FBtr0343854|FBtr0343854|FBtr0081289|FBtr0081289 19736722|19736722|19736722|19736722 19736956|19736956|19737088|19737088 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 2L + 19736719 19736770 stop_codon Nf-YB FlyBase G4248.1 AGTAACCCCTTTCTTACTTACCCTGTTAGTTAAGGTTCTTTTGACATTAAGG 14 19736736 0.981739131 6 14 160 1 1.255272505 0.111111111 0.285714286 0.444444444 14 0 0 18 2L:19736719-19736770 6 11 386 FBgn0032816 140.6666667 20.89666667 32.17 0.078199052 0.526399745 0.341933478 -3 -3 -3 0.1 dme-miR-1012-3p 7mer-m8 TTGACTA 2L 19736823 19736829 + 2L_19736823_19736829_+ 0.631525399 0.630689778 0.631107588 0.000590858 Nf-YB FBtr0081289|FBtr0343854 19736722|19736722 19737088|19736956 2L + 19736806 19736837 3'utr Nf-YB FlyBase G5466.1 CTAACAGTACACCTTGATTGACTATTTAAGTT 6 19736823 0.874956832 4 6 39 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2L:19736806-19736837 7 Nf-YB FBtr0343854|FBtr0081289 19736722|19736722 19736956|19737088 TTGACTA 7mer-m8 dme-miR-1012-3p 2L + 19736806 19736842 3'utr Nf-YB FlyBase G4249.1 CTAACAGTACACCTTGATTGACTATTTAAGTTAATAT 7 19736824 0.654809606 5 7 62 1 1.079181246 0.083333333 0.428571429 0.666666667 7 0 0 12 2L:19736806-19736842 7 6.5 387 FBgn0032816 140.6666667 20.89666667 32.17 0.046208531 0.311054395 0.202051601 0 -1 -0.5 0.1 dme-miR-276a-3p 6mer2-7 GTTCCT 2L 19743020 19743025 - 2L_19743020_19743025_- 0.999995197 0.999996655 0.999995926 1.06E-06 CG10631 FBtr0081324 19742815 19743219 2L - 19742965 19743079 3'utr CG10631 FlyBase G11803.1 TCATAAGTGGCTTGTGAAGAAAAGATATGCCATACAAAGAAACAAACACAAAATGTTCCTTAAGTTTTTGTTTTTACTTATTATACATACGTACTTTAACTGTGAGATAAATGTG 20 19743026 0.963390161 9 19 110 0.964285714 1.130333768 0.035714286 0.25 0.464285714 20 0 1 27 2L:19742965-19743079 6 CG10631 FBtr0081324 19742815 19743219 GTTCCT 6mer2-7 dme-miR-276a-3p 2L - 19743016 19743079 3'utr CG10631 FlyBase G9074.1 TCATAAGTGGCTTGTGAAGAAAAGATATGCCATACAAAGAAACAAACACAAAATGTTCCTTAAG 14 19743026 0.943741751 6 14 56 1 1.255272505 0 0.285714286 0.444444444 14 0 0 18 2L:19743016-19743079 6 8.5 388 FBgn0032817 1456.62 14.47 22.22333333 0.005835427 0.587422253 0.382480876 1 1 1 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 1976171 1976177 - 2L_1976171_1976177_- 0.658999076 0.583241137 0.621120106 0.053568996 CG15356 FBtr0077869 1975461 1976541 2L - 1976108 1976217 3'utr CG15356 FlyBase G6882.1 CCTGGGAGCCCGGAGTCGATCACCTCCCTCCTGTAAATAGGGCAGCTGCCTCTGCGGACTACCTTAATTTGTATAGCTTGTAAATAGATTCCACACTTCGCCCAGAAACC 17 1976192 0.971213245 6 15 94 0.952380952 1 0.333333333 0.176470588 0.333333333 17 0 1 20 2L:1976108-1976217 7 CG15356 FBtr0077869 1975461 1976541 GGCAGCT 7mer-m8 dme-miR-980-3p 2L - 1976156 1976241 3'utr CG15356 FlyBase G5378.1 GCGCCCATTTCATCCGCCTGCAATCCTGGGAGCCCGGAGTCGATCACCTCCCTCCTGTAAATAGGGCAGCTGCCTCTGCGGACTAC 12 1976186 0.960362997 6 12 68 1 1.204119983 0.3125 0.25 0.4375 12 0 0 16 2L:1976156-1976241 7 4 389 FBgn0031377 219.9966667 6.103333333 9.273333333 0.018182094 0.655379574 0.431344357 15 9 12 0.1 dme-miR-79-3p 6mer3-8 TAGCTT 2L 1976453 1976458 - 2L_1976453_1976458_- 0.999982938 0.999986405 0.999984671 2.47E-06 CG15356 FBtr0077869 1975461 1976541 2L - 1976393 1976511 3'utr CG15356 FlyBase G6884.1 AGAACGCACACACACACAGCAGACCCGGTTTGAATTAGATTTAGTTGGTAGTTTAGCTTGAATGTCGAAGGTTTTCCCACTAATTTCCAATTATCGCAACCCGCAGCCTTGGAGCAAAG 63 1976459 0.987509438 10 57 511 0.901408451 1.505149978 0.14084507 0.095238095 0.197183099 63 6 1 64 2L:1976393-1976511 6 CG15356 FBtr0077869 1975461 1976541 TAGCTT 6mer3-8 dme-miR-79-3p 2L - 1976438 1976508 3'utr CG15356 FlyBase G5380.1 ACGCACACACACACAGCAGACCCGGTTTGAATTAGATTTAGTTGGTAGTTTAGCTTGAATGTCGAAGGTTT 37 1976459 0.985148426 6 37 303 1 1.755874856 0.263157895 0.486486486 0.666666667 37 0 0 57 2L:1976438-1976508 6 28 390 FBgn0031377 219.9966667 6.103333333 9.273333333 0.127274656 4.587657018 3.019410496 1 1 1 0.1 dme-miR-980-5p 6mer3-8 GAAAAA 2L 19776906 19776911 - 2L_19776906_19776911_- 0.98417808 0.999968403 0.992073242 0.011165428 CdGAPr FBtr0300966|FBtr0081318|FBtr0332179|FBtr0300967 19776255|19775102|19774872|19776255 19776941|19776941|19776941|19776941 2L - 19776852 19777019 stop_codon CdGAPr FlyBase G11831.1 AACAGAGAAAAGATCTCACCACAATTCTCAATACGCGACGTGACAGCGATGTTCGAATCTCGTTCACAAAATCAATAGGCTAAGGCAACTTTAGCAACTAATTACATCGAAAAAATGAGACCGCTACCTACATATAATCACAGTTCTGGAGCAGCGTGTATATATGCC 84 19776904 0.980423884 17 80 370 0.946808511 1.648360011 0.117021277 0.119047619 0.212765957 84 4 1 89 2L:19776852-19777019 6 CdGAPr FBtr0332179|FBtr0300967|FBtr0300966|FBtr0081318 19774872|19776255|19776255|19775102 19776941|19776941|19776941|19776941 GAAAAA 6mer3-8 dme-miR-980-5p 2L - 19776848 19776916 5'utr CdGAPr FlyBase G9092.1 ACATCGAAAAAATGAGACCGCTACCTACATATAATCACAGTTCTGGAGCAGCGTGTATATATGCCAATG 25 19776904 0.974267814 5 24 75 0.973684211 1.568201724 0.052631579 0.4 0.605263158 25 1 0 37 2L:19776848-19776916 6 26 391 FBgn0032821 977 18.21666667 27.97 0.026612078 1.42726441 0.929567394 -7 -7 -7 0.1 dme-miR-970-3p 6mer2-7 CTTATG 2L 19793783 19793788 - 2L_19793783_19793788_- 1 1 1 0 fs(2)ltoPP43 FBtr0332246|FBtr0081317 19793609|19793484 19794265|19794524 2L - 19793737 19793831 3'utr fs(2)ltoPP43 FlyBase G11855.1 AGTGTACTATTTGGAATCGTTTTAGGCAAATGTCTCTCATTACCTTATGTTCATAGAATTAATTAGCTATTAGATTAGAATAATTTACCCCCACA 23 19793801 0.990687535 11 20 204 0.884615385 1.06069784 0.192307692 0.130434783 0.230769231 23 2 1 23 2L:19793737-19793831 6 fs(2)ltoPP43 FBtr0081317|FBtr0332246 19793484|19793609 19794524|19794265 CTTATG 6mer2-7 dme-miR-970-3p 2L - 19793775 19793813 3'utr fs(2)ltoPP43 FlyBase G9106.1 GTTTTAGGCAAATGTCTCTCATTACCTTATGTTCATAGA 12 19793792 0.674375356 3 11 96 0.933333333 1.146128036 0.133333333 0.166666667 0.333333333 12 1 0 14 2L:19793775-19793813 6 12.5 392 FBgn0004811 606.5633333 48.93333333 75.4 0.020607906 0.255449591 0.165782493 13 4 8.5 0.1 "dme-miR-995-3p,dme-miR-998-3p" 7mer-A1 GGTGCTA 2L 19794454 19794460 - 2L_19794454_19794460_- 0.823349562 0.823348833 0.823349198 5.66E-07 fs(2)ltoPP43 FBtr0081317 19793484 19794524 2L - 19794446 19794483 5'utr fs(2)ltoPP43 FlyBase G11858.1 TCTAAGCGGTGTGTCTGTGTGTCGGTGCTATGGGCGTA 9 19794453 0.82185157 5 8 70 0.909090909 1 0.363636364 0.222222222 0.363636364 9 1 0 10 2L:19794446-19794483 7 fs(2)ltoPP43 FBtr0081317 19793484 19794524 GGTGCTA 7mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 2L - 19794443 19794480 5'utr fs(2)ltoPP43 FlyBase G9108.1 AAGCGGTGTGTCTGTGTGTCGGTGCTATGGGCGTATCT 9 19794454 0.815659624 3 9 77 1 1.041392685 0.272727273 0.222222222 0.363636364 9 0 0 11 2L:19794443-19794480 7 9 393 FBgn0004811 606.5633333 48.93333333 75.4 0.014837692 0.183923706 0.119363395 -7 -6 -6.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 2L 1984546 1984551 - 2L_1984546_1984551_- 0.999999955 0.999998284 0.999999119 1.20E-06 Got2 FBtr0077867|FBtr0077868 1984510|1984510 1984705|1984705 2L - 1984520 1984617 3'utr Got2 FlyBase G6898.1 TGCGAAGTCTAGATAAGCCAATGCATTTTGCACACTCTCTATCCATATCTCTGTATATAAGCTAAATGATCTGCCTTTTAAAAAATAAAGCATTTAAA 290 1984551 0.780995854 17 275 2269 0.953168044 1.693978059 0.060606061 0.196551724 0.358126722 290 11 6 346 2L:1984520-1984617 6 Got2 FBtr0077867|FBtr0077868 1984510|1984510 1984705|1984705 TGATCT 6mer3-8 dme-bantam-3p 2L - 1984527 1984621 3'utr Got2 FlyBase G5386.1 AAATTGCGAAGTCTAGATAAGCCAATGCATTTTGCACACTCTCTATCCATATCTCTGTATATAAGCTAAATGATCTGCCTTTTAAAAAATAAAGC 163 1984551 0.796026987 18 155 1210 0.963709677 1.901276646 0.056451613 0.374233129 0.588709677 163 7 2 239 2L:1984527-1984621 6 207.5 394 FBgn0001125 531.6666667 41.34 63.08 0.390282132 5.019351717 3.289473684 0 0 0 0.1 dme-miR-8-3p 7mer-m8 CAGTATT 2L 20058264 20058270 - 2L_20058264_20058270_- 0.658696009 0.660828871 0.65976244 0.001508188 barr FBtr0081348|FBtr0343850|FBtr0081349 20058161|20058161|20058161 20058384|20058384|20058384 2L - 20058234 20058365 3'utr barr FlyBase G11864.2 AATTCATAGTTCTAGTTGCCCTTAAATGCTGTTACAATTTATTTTCACGGCTACTCCTTAATCTCTTACCTCTATTTTTAACTCCCAATTCGTATCAGTATTCTGAAACAGATATCCTCACCCCAGTCGAAT 86 20058271 0.74930785 14 80 686 0.940594059 1.977723605 0.00990099 0.151162791 0.277227723 86 6 0 95 2L:20058234-20058365 7 barr FBtr0081348|FBtr0343850|FBtr0081349 20058161|20058161|20058161 20058384|20058384|20058384 CAGTATT 7mer-m8 dme-miR-8-3p 2L - 20058240 20058288 3'utr barr FlyBase G9115.2 TTAACTCCCAATTCGTATCAGTATTCTGAAACAGATATCCTCACCCCAG 32 20058271 0.734508833 7 24 227 0.803921569 1.612783857 0.078431373 0.4375 0.647058824 32 10 0 41 2L:20058240-20058288 7 31 395 FBgn0014127 727.3466667 33.53666667 51.05 0.042620667 0.924361395 0.607247796 1 1 1 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 20063902 20063907 + 2L_20063902_20063907_+ 0.995818716 0.997991218 0.996904967 0.001536189 lok FBtr0306234 20063184 20064378 2L + 20063840 20063953 3'utr lok FlyBase G5496.1 CGACGACGTTTTGCAGAGCAGCTGGCTGCGCGATGCGCCCATGCTGCAGAAGGCGAAGAGGCTGATGAAGCTCGATGGCATGGAAATCGAGGAGGAGAACTTCCTTGAGCCACC 15 20063905 0.981906363 6 14 38 0.947368421 1.255272505 0.473684211 0.266666667 0.421052632 15 1 0 18 2L:20063840-20063953 6 lok FBtr0306234 20063184 20064378 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L + 20063855 20063924 3'utr lok FlyBase G4275.1 GAGCAGCTGGCTGCGCGATGCGCCCATGCTGCAGAAGGCGAAGAGGCTGATGAAGCTCGATGGCATGGAA 7 20063905 0.895168659 3 7 23 1 1.113943352 0.307692308 0.857142857 0.923076923 7 0 0 13 2L:20063855-20063924 6 6.5 396 FBgn0019686 524.4266667 29.24666667 44.53333333 0.012394488 0.22224755 0.145958084 -3 -3 -3 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 2L 20063986 20063991 + 2L_20063986_20063991_+ 0.999982556 0.999999999 0.999991278 1.23E-05 lok FBtr0081330|FBtr0306234|FBtr0081328|FBtr0081329 20063974|20063184|20063974|20063974 20064378|20064378|20064381|20064381 2L + 20063966 20064021 stop_codon lok FlyBase G5497.1 GCGACGCTAGGTTTCGTTTCTGTGTTTCCATCGTTAATACGTGAGGGTCGAGGCGC 49 20063984 0.73622517 10 24 381 0.545454545 1.176091259 0.327272727 0.12244898 0.218181818 49 24 1 30 2L:20063966-20064021 6 lok FBtr0081328|FBtr0081329|FBtr0081330|FBtr0306234 20063974|20063974|20063974|20063184 20064381|20064381|20064378|20064378 TGTGTT 6mer3-8 dme-miR-317-3p 2L + 20063938 20064006 stop_codon lok FlyBase G4276.1 ACTTCCTTGAGCCACCCACCAAGCGATCGCGACGCTAGGTTTCGTTTCTGTGTTTCCATCGTTAATACG 24 20063983 0.997549566 5 9 143 0.342857143 1.079181246 0.285714286 0.416666667 0.6 24 23 0 12 2L:20063938-20064006 6 16.5 397 FBgn0019686 524.4266667 29.24666667 44.53333333 0.031462931 0.564166857 0.370508982 2 3 2.5 0.1 dme-miR-276a-3p 7mer-A1 GTTCCTA 2L 20073147 20073153 + 2L_20073147_20073153_+ 0.823333802 0.823323034 0.823328418 7.64E-06 bwa FBtr0081331 20072671 20073719 2L + 20073118 20073170 3'utr bwa FlyBase G5504.1 AATTCATCCCATGACTTCCAGAACAAATGGTTCCTACGCTTTCCCAAAGAGAC 16 20073145 0.966319387 3 16 85 1 1.255272505 0.055555556 0.125 0.222222222 16 0 0 18 2L:20073118-20073170 7 bwa FBtr0081331 20072671 20073719 GTTCCTA 7mer-A1 dme-miR-276a-3p 2L + 20073097 20073166 3'utr bwa FlyBase G4282.1 GACTGTGATATGTTATGAACTAATTCATCCCATGACTTCCAGAACAAATGGTTCCTACGCTTTCCCAAAG 14 20073145 0.990700854 3 13 78 0.894736842 1.230448921 0.052631579 0.357142857 0.526315789 14 2 0 17 2L:20073097-20073166 7 13 398 FBgn0045064 300.39 20.15 30.82666667 0.043277073 0.64516129 0.421712803 2 2 2 0.1 dme-miR-283-5p 6mer3-8 TGATAT 2L 20073504 20073509 + 2L_20073504_20073509_+ 0.999999974 0.999999999 0.999999986 0 bwa FBtr0331184|FBtr0081331 20073453|20072671 20073719|20073719 2L + 20073484 20073521 3'utr bwa FlyBase G5505.1 AAACAGAGACATACACAGCGTGATATAAGTTAGAGTTG 15 20073510 0.906964008 3 11 80 0.65 1.113943352 0.25 0.266666667 0.45 15 7 0 13 2L:20073484-20073521 6 bwa FBtr0331184|FBtr0081331 20073453|20072671 20073719|20073719 TGATAT 6mer3-8 dme-miR-283-5p 2L + 20073488 20073523 3'utr bwa FlyBase G4283.1 AGAGACATACACAGCGTGATATAAGTTAGAGTTGCA 8 20073495 0.884015696 3 6 43 0.818181818 0.954242509 0.272727273 0.375 0.545454545 8 2 0 9 2L:20073488-20073523 6 11.5 399 FBgn0045064 300.39 20.15 30.82666667 0.038283565 0.570719603 0.373053633 -6 9 1.5 0.1 dme-miR-277-3p 6mer3-8 TGCATT 2L 20081774 20081779 - 2L_20081774_20081779_- 0.999992492 0.999990102 0.999991297 1.70E-06 fok FBtr0310559 20081604 20082782 2L - 20081761 20081790 3'utr fok FlyBase G11884.1 GATTTAACAATTGCATTAGTCATTTAAGTA 6 20081775 0.743476026 3 6 50 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 2L:20081761-20081790 6 fok FBtr0310559 20081604 20082782 TGCATT 6mer3-8 dme-miR-277-3p 2L - 20081762 20081796 3'utr fok FlyBase G9128.1 AAAAACGATTTAACAATTGCATTAGTCATTTAAGT 6 20081775 0.69648804 4 6 51 1 1 0.4 0.333333333 0.6 6 0 0 10 2L:20081762-20081796 6 6 400 FBgn0263773 896.66 79.66 118.1266667 0.0066915 0.07532011 0.050792934 -4 -4 -4 0.1 dme-miR-980-3p 7mer-A1 GCAGCTA 2L 20082577 20082583 - 2L_20082577_20082583_- 0.823349558 0.819937184 0.821643371 0.002412931 fok FBtr0310558|FBtr0310559 20082302|20081604 20082782|20082782 2L - 20082571 20082613 3'utr fok FlyBase G11891.1 AGATTGCGCGAGAGAGCGAGACAGCAGCCTGCAGCTACAATAA 13 20082584 0.747986033 4 11 19 0.857142857 0.77815125 0.214285714 0.076923077 0.142857143 13 1 1 12 2L:20082571-20082613 7 fok FBtr0310558|FBtr0310559 20082302|20081604 20082782|20082782 GCAGCTA 7mer-A1 dme-miR-980-3p 2L - 20082570 20082629 3'utr fok FlyBase G9132.1 AAGCTGTCGAAGACGAAGATTGCGCGAGAGAGCGAGACAGCAGCCTGCAGCTACAATAAT 10 20082578 0.825257513 5 8 21 0.833333333 1.176091259 0.555555556 0.5 0.722222222 10 3 0 15 2L:20082570-20082629 7 8 401 FBgn0263773 896.66 79.66 118.1266667 0.008921999 0.100426814 0.067723912 1 -5 -2 0.1 dme-miR-1006-3p 6mer3-8 CGAATT 2L 20093153 20093158 - 2L_20093153_20093158_- 1 1 1 0 Taf13 FBtr0081340 20093086 20093223 2L - 20093124 20093196 3'utr Taf13 FlyBase G11903.1 CCAGGTATAAGCCAAACCTAGCAGTTAGCTCCAAGATGCGAATTATTTTTAATGTCTTTAATACTCTAAGCTA 18 20093188 0.967328873 8 18 99 1 1.322219295 0.095238095 0.166666667 0.285714286 18 0 0 21 2L:20093124-20093196 6 Taf13 FBtr0081340 20093086 20093223 CGAATT 6mer3-8 dme-miR-1006-3p 2L - 20093139 20093195 3'utr Taf13 FlyBase G9139.1 CAGGTATAAGCCAAACCTAGCAGTTAGCTCCAAGATGCGAATTATTTTTAATGTCTT 7 20093169 0.987594947 5 6 45 0.777777778 0.84509804 0.222222222 0.285714286 0.444444444 7 2 0 7 2L:20093139-20093195 6 6.5 402 FBgn0032847 298 62.63 96.09 0.021812081 0.103784129 0.067644916 30 11 20.5 0.1 dme-miR-965-3p 6mer3-8 TACGCT 2L 201533 201538 + 2L_201533_201538_+ 0.995593974 0.879136043 0.937365008 0.082348242 spen FBtr0330652|FBtr0332336|FBtr0078122|FBtr0330653|FBtr0078123|FBtr0078121|FBtr0306341|FBtr0332337 201413|201413|201413|201413|201413|201413|201413|201413 201588|203250|201588|203250|203250|203397|201588|201588 2L + 201461 201586 3'utr spen FlyBase G617.1 CCAGATGTTAAACTTCACAGGCTTACACGACAACATAAGAGGAACCAGATAAAGAAACCAACAAAAACATGTTACGCTCTTCTAGTATTTTAAGTAATTTTAAATAGCGATTAAACAAGCAAAAGT 693 201532 0.947549737 23 669 7251 0.9625323 2.173186268 0.025839793 0.098124098 0.19250646 693 25 4 745 2L:201461-201586 6 spen FBtr0078123|FBtr0078121|FBtr0332336|FBtr0330653 201413|201413|201413|201413 203250|203397|203250|203250 TACGCT 6mer3-8 dme-miR-965-3p 2L + 201471 201604 3'utr spen FlyBase G492.2 AACTTCACAGGCTTACACGACAACATAAGAGGAACCAGATAAAGAAACCAACAAAAACATGTTACGCTCTTCTAGTATTTTAAGTAATTTTAAATAGCGATTAAACAAGCAAAAGTTTAAAAAAAAGCAAAGGA 392 201532 0.990917382 21 357 3876 0.92293578 1.6601753 0.044036697 0.304347826 0.500917431 391 32 10 503 2L:201471-201604 6 500.5 403 FBgn0016977 7307.703333 43.43 66.34333333 0.06848937 11.52429196 7.544088831 1 1 1 0.1 dme-bantam-3p 8mer-A1 TGATCTCA 2L 201860 201867 + 2L_201860_201867_+ 0.631136327 0.631136327 0.631136327 0 spen FBtr0332336|FBtr0330653|FBtr0078123|FBtr0078121 201413|201413|201413|201413 203250|203250|203250|203397 2L + 201800 201890 3'utr spen FlyBase G618.3 TTATATAACTCTCCGTAATTAAAAACCTTAAAGAAAAAGCTTGCAAAGTATCGTTAAGTTTGATCTCAAGAAAGAATGTTTTATTTTTGCT 1179 201859 0.786842431 15 1148 9915 0.973856209 2.086036093 0.328976035 0.146734521 0.269426289 1179 26 10 1341 2L:201800-201890 8 spen FBtr0078123|FBtr0078121|FBtr0332336|FBtr0330653 201413|201413|201413|201413 203250|203397|203250|203250 TGATCTCA 8mer-A1 dme-bantam-3p 2L + 201788 201902 3'utr spen FlyBase G495.1 TGTCTAAATTAATTATATAACTCTCCGTAATTAAAAACCTTAAAGAAAAAGCTTGCAAAGTATCGTTAAGTTTGATCTCAAGAAAGAATGTTTTATTTTTGCTTATTTAAAAAGA 710 201859 0.986641201 16 680 5881 0.957364341 1.994756945 0.304263566 0.322535211 0.533914729 710 35 9 988 2L:201788-201902 8 935 404 FBgn0016977 7307.703333 43.43 66.34333333 0.127947175 21.52889708 14.09335276 1 1 1 0.1 dme-miR-282-5p 7mer-m8 AGAGGCT 2L 202284 202290 + 2L_202284_202290_+ 0.631185755 0.629489135 0.630337445 0.001199748 spen FBtr0332336|FBtr0330653|FBtr0078123|FBtr0078121 201413|201413|201413|201413 203250|203250|203250|203397 2L + 201907 202413 3'utr spen FlyBase G619.1 AACAAACAGAAAAACCTACACATACAAATTGAATTGAAAGAAATGTTACAGAAAGCTTACAACATATTAACTGTTTACTGTACTATGCATACTACTACCCATACATAATATTAATATTCGATCCTAATCCTAAAACGATTAAGTTTTTATTGGTGAATAACTTTCGACTACTTCGATAGAAACGTAACTACACCACGTTATACAAAGTTTCCGCCTTCGAACAACCGACCATTTTTTTTGACAGATCGGTTCCTTGGCTCTATGGAATGCCTGCATATAAAACTAGTATACAGGGCCTAGCATAGACCCAAAGAACTTAAGATGAGTCCGGACTGTCACCCACGCTGTTAAGCACAATTAGGTTTAAAGTTGCGCCCAGAGGCTTTTCCTACGATAACATACACACACATACATTATACTACGATTATTTATCTAGACGCGTATTTAATTATAATTAATATGTTAAGCTCATTATTTTAAAACTCAGACACGTTTCACATCGTGTTT 497 202291 0.982279671 84 457 3689 0.922535211 2.020361283 0.107394366 0.116700201 0.227112676 497 40 4 524 2L:201907-202413 7 spen FBtr0078123|FBtr0078121|FBtr0332336|FBtr0330653 201413|201413|201413|201413 203250|203397|203250|203250 AGAGGCT 7mer-m8 dme-miR-282-5p 2L + 202092 202305 3'utr spen FlyBase G496.1 AACTACACCACGTTATACAAAGTTTCCGCCTTCGAACAACCGACCATTTTTTTTGACAGATCGGTTCCTTGGCTCTATGGAATGCCTGCATATAAAACTAGTATACAGGGCCTAGCATAGACCCAAAGAACTTAAGATGAGTCCGGACTGTCACCCACGCTGTTAAGCACAATTAGGTTTAAAGTTGCGCCCAGAGGCTTTTCCTACGATAACA 261 202291 0.823164389 33 237 1904 0.912234043 1.632204133 0.085106383 0.346153846 0.54787234 260 26 7 343 2L:202092-202305 7 178 405 FBgn0016977 7307.703333 43.43 66.34333333 0.024357858 4.09854939 2.683012611 -7 -7 -7 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 20344937 20344942 + 2L_20344937_20344942_+ 0.945904252 0.611002896 0.778453574 0.236811051 spir FBtr0339234 20344661 20348386 2L + 20344911 20344986 5'utr spir FlyBase G5541.1 AATCTCGAAATATTTTGTAAAAACAAATGTGAATGTAGAAATAAAAGAAAGTCTACTGCAATTCGCCCCTAGTATT 23 20344944 0.755527657 8 23 139 1 1.477121255 0.233333333 0.260869565 0.433333333 23 0 0 30 2L:20344911-20344986 6 spir FBtr0339234 20344661 20348386 ATGTGA 6mer3-8 dme-miR-1003-3p 2L + 20344922 20344991 5'utr spir FlyBase G4303.1 ATTTTGTAAAAACAAATGTGAATGTAGAAATAAAAGAAAGTCTACTGCAATTCGCCCCTAGTATTATTTA 31 20344944 0.813418026 5 31 156 1 1.579783597 0.289473684 0.193548387 0.342105263 31 0 0 38 2L:20344922-20344991 6 22.5 406 FBgn0003475 1306.356667 49.26 74.34 0.017223474 0.456760049 0.302663438 -7 -7 -7 0.1 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 20345095 20345102 + 2L_20345095_20345102_+ 0.625363546 0.625363179 0.625363362 2.12E-07 spir FBtr0339234 20344661 20348386 2L + 20345071 20345114 3'utr spir FlyBase G5542.1 TGTATTTTTAACTTGACAAAAAATTACGCTTACAAACAAAATAA 84 20345094 0.833271381 4 81 387 0.98019802 1.995635195 0 0.166666667 0.306930693 84 2 0 99 2L:20345071-20345114 8 spir FBtr0339234 20344661 20348386 TACGCTTA 8mer-A1 dme-miR-965-3p 2L + 20345039 20345114 3'utr spir FlyBase G4304.1 TTTCTCGGCTGCCAATAATCGTATAAAAATAATGTATTTTTAACTTGACAAAAAATTACGCTTACAAACAAAATAA 57 20345094 0.946662175 4 56 242 1 1.908485019 0 0.263157895 0.481481481 57 0 0 81 2L:20345039-20345114 8 68.5 407 FBgn0003475 1306.356667 49.26 74.34 0.05243591 1.390580593 0.921442023 1 1 1 0.1 dme-miR-305-3p 6mer2-7 TGTGCC 2L 20346153 20346158 + 2L_20346153_20346158_+ 0.999998083 0.999999393 0.999998738 9.19E-07 spir FBtr0339234 20344661 20348386 2L + 20346135 20346169 3'utr spir FlyBase G5543.1 AGCGTCGCGTCTGCTTCCTGTGCCTGCGCACTCGG 7 20346153 0.813906897 2 7 51 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 2L:20346135-20346169 6 spir FBtr0339234 20344661 20348386 TGTGCC 6mer2-7 dme-miR-305-3p 2L + 20346133 20346166 3'utr spir FlyBase G4305.1 AAAGCGTCGCGTCTGCTTCCTGTGCCTGCGCACT 5 20346153 0.708734623 2 5 35 1 0.84509804 0 0.4 0.571428571 5 0 0 7 2L:20346133-20346166 6 6 408 FBgn0003475 1306.356667 49.26 74.34 0.004592926 0.12180268 0.08071025 0 0 0 0.1 dme-bantam-3p 7mer-m8 TGATCTC 2L 20346351 20346357 + 2L_20346351_20346357_+ 0.661610625 0.661614848 0.661612737 2.97E-06 spir FBtr0339234 20344661 20348386 2L + 20346335 20346375 3'utr spir FlyBase G5544.1 AACGTGCCCCTCGTGCTGATCTCGCCATCGCTGCTGTCCAG 15 20346351 0.773587931 2 14 98 0.933333333 1.146128036 0.266666667 0 0 15 1 0 14 2L:20346335-20346375 7 spir FBtr0339234 20344661 20348386 TGATCTC 7mer-m8 dme-bantam-3p 2L + 20346334 20346375 3'utr spir FlyBase G4306.1 AAACGTGCCCCTCGTGCTGATCTCGCCATCGCTGCTGTCCAG 7 20346350 0.728864804 3 7 41 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 2L:20346334-20346375 7 11 409 FBgn0003475 1306.356667 49.26 74.34 0.008420365 0.223304913 0.147968792 0 1 0.5 0.1 dme-miR-79-3p 6mer2-7 AGCTTT 2L 20347554 20347559 + 2L_20347554_20347559_+ 0.999998033 0.999984068 0.999991051 9.83E-06 spir FBtr0339234|FBtr0306556|FBtr0081353|FBtr0081355|FBtr0301884|FBtr0081352 20344661|20347168|20347168|20347168|20347168|20347168 20348386|20348386|20348386|20348386|20348386|20348386 2L + 20347501 20347566 3'utr spir FlyBase G5548.1 ATCGTGTTAGTCTAGTGAATAAGCAGAGGAGAATACCGAGAATTCCTGGCTGAAGCTTTGTACATT 63 20347544 0.884710222 6 58 287 0.932432432 1.838849091 0.081081081 0.142857143 0.27027027 63 5 0 69 2L:20347501-20347566 6 spir FBtr0301884|FBtr0081352|FBtr0339234|FBtr0306556|FBtr0081353|FBtr0081355 20347168|20347168|20344661|20347168|20347168|20347168 20348386|20348386|20348386|20348386|20348386|20348386 AGCTTT 6mer2-7 dme-miR-79-3p 2L + 20347513 20347563 3'utr spir FlyBase G4309.1 TAGTGAATAAGCAGAGGAGAATACCGAGAATTCCTGGCTGAAGCTTTGTAC 26 20347543 0.816031972 6 23 118 0.840909091 1.568201724 0.295454545 0.5 0.704545455 26 7 0 37 2L:20347513-20347563 6 26.5 410 FBgn0003475 1306.356667 49.26 74.34 0.020285425 0.537961835 0.356470272 10 11 10.5 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 20348136 20348141 + 2L_20348136_20348141_+ 0.517083869 0.994399125 0.755741497 0.337512815 spir FBtr0339234|FBtr0306556|FBtr0081353|FBtr0081355|FBtr0301884|FBtr0081352 20344661|20347168|20347168|20347168|20347168|20347168 20348386|20348386|20348386|20348386|20348386|20348386 2L + 20348112 20348151 3'utr spir FlyBase G5550.1 CGACGTCTATATAATTGTACAAGCTGATGATGCAAAGCAA 9 20348139 0.688463713 3 9 49 1 0.954242509 0.222222222 0 0 9 0 0 9 2L:20348112-20348151 6 spir FBtr0301884|FBtr0081352|FBtr0339234|FBtr0306556|FBtr0081353|FBtr0081355 20347168|20347168|20344661|20347168|20347168|20347168 20348386|20348386|20348386|20348386|20348386|20348386 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L + 20348109 20348153 3'utr spir FlyBase G4310.1 AAGCGACGTCTATATAATTGTACAAGCTGATGATGCAAAGCAAAC 12 20348139 0.966943091 2 10 58 0.8 0.903089987 0.3 0.416666667 0.65 12 3 1 16 2L:20348109-20348153 6 10.5 411 FBgn0003475 1306.356667 49.26 74.34 0.008037621 0.213154689 0.141242938 -3 -3 -3 0.1 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 2L 20361281 20361288 + 2L_20361281_20361288_+ 0.619324475 0.625272613 0.622298544 0.004205942 RtGEF FBtr0302106 20360849 20361429 2L + 20361255 20361314 3'utr RtGEF FlyBase G5562.1 AAGATCAACAAACTCAACTCTGCAATTGGTGCTAAGCAGCGAACAAAGGAATCCAAAGTT 151 20361280 0.765162728 4 146 773 0.981707317 2.206825876 0.237804878 0.079470199 0.152439024 151 3 0 161 2L:20361255-20361314 8 RtGEF FBtr0302106 20360849 20361429 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 2L + 20361198 20361308 3'utr RtGEF FlyBase G4319.1 ATGTTTAAGAGAAAAGATTGATTTTTTGGTTGAACCATTGGCCACTGATTTCGTTTTAAGATCAACAAACTCAACTCTGCAATTGGTGCTAAGCAGCGAACAAAGGAATCC 109 20361280 0.963488341 8 107 556 0.967567568 2.252853031 0.210810811 0.495412844 0.702702703 109 6 0 179 2L:20361198-20361308 8 125.5 412 FBgn0015803 1414.776667 51.74333333 79.37666667 0.08870658 2.425433228 1.581069164 1 1 1 0.1 dme-miR-190-5p 6mer3-8 ACATAT 2L 20364642 20364647 + 2L_20364642_20364647_+ 0.999367952 0.999955457 0.999661705 0.000415425 RtGEF FBtr0081357|FBtr0112885|FBtr0336747|FBtr0081356 20364489|20364489|20360566|20364489 20365254|20365254|20365254|20365254 2L + 20364581 20364687 3'utr RtGEF FlyBase G5566.1 TCTTAGACACTTTTACTTTGCATCTTCGGGGGGCAGTGGGTCAATTACCAAAAAATTATCTACATATGGACTTTGTAATCGTATATGGATTGTATTTACCGAGTACT 178 20364647 0.892882906 16 178 1550 1 2.33243846 0.106976744 0.202247191 0.339534884 178 0 0 215 2L:20364581-20364687 6 RtGEF FBtr0081356|FBtr0336747|FBtr0112885|FBtr0081357 20364489|20360566|20364489|20364489 20365254|20365254|20365254|20365254 ACATAT 6mer3-8 dme-miR-190-5p 2L + 20364589 20364686 3'utr RtGEF FlyBase G4324.1 ACTTTTACTTTGCATCTTCGGGGGGCAGTGGGTCAATTACCAAAAAATTATCTACATATGGACTTTGTAATCGTATATGGATTGTATTTACCGAGTAC 134 20364647 0.880216575 11 130 1164 0.978723404 1.963787827 0.085106383 0.305970149 0.505319149 134 3 1 184 2L:20364589-20364686 6 119 413 FBgn0015803 1414.776667 51.74333333 79.37666667 0.084112216 2.29981318 1.49918112 -5 -5 -5 0.1 dme-miR-190-5p 6mer3-8 ACATAT 2L 20364991 20364996 + 2L_20364991_20364996_+ 0.999403153 0.968821555 0.984112354 0.021624457 RtGEF FBtr0081357|FBtr0112885|FBtr0336747|FBtr0081356 20364489|20364489|20360566|20364489 20365254|20365254|20365254|20365254 2L + 20364957 20365019 3'utr RtGEF FlyBase G5568.1 CACAACATGCATATTTTACTGGCATAGATTCTACACATATTAGACTTATTGTATTTTACCTAT 14 20364996 0.988941344 5 14 130 1 1.176091259 0.466666667 0.071428571 0.133333333 14 0 0 15 2L:20364957-20365019 6 RtGEF FBtr0081356|FBtr0336747|FBtr0112885|FBtr0081357 20364489|20360566|20364489|20364489 20365254|20365254|20365254|20365254 ACATAT 6mer3-8 dme-miR-190-5p 2L + 20364982 20365017 3'utr RtGEF FlyBase G4326.1 AGATTCTACACATATTAGACTTATTGTATTTTACCT 7 20364997 0.920977446 2 7 64 1 1.079181246 0.75 0.428571429 0.666666667 7 0 0 12 2L:20364982-20365017 6 9 414 FBgn0015803 1414.776667 51.74333333 79.37666667 0.006361428 0.173935451 0.113383446 -5 -6 -5.5 0.1 dme-miR-92b-3p 6mer2-7 TGCAAT 2L 20423015 20423020 + 2L_20423015_20423020_+ 0.99865491 0.999999791 0.999327351 0.000950988 Arpc2 FBtr0346418|FBtr0081358 20422495|20422495 20423027|20423027 2L + 20422983 20423032 3'utr Arpc2 FlyBase G5589.1 AATCGGAATTAATAAAAACGAGAAAATCAAACTGCAATGTAAAATAAAAA 8 20423020 0.938144659 3 8 31 1 0.954242509 0 0.125 0.222222222 8 0 0 9 2L:20422983-20423032 6 Arpc2 FBtr0081358|FBtr0346418 20422495|20422495 20423027|20423027 TGCAAT 6mer2-7 dme-miR-92b-3p 2L + 20422983 20423034 3'utr Arpc2 FlyBase G4345.1 AATCGGAATTAATAAAAACGAGAAAATCAAACTGCAATGTAAAATAAAAAAA 11 20423009 0.847411698 2 10 36 0.923076923 1.079181246 0.538461538 0.181818182 0.307692308 11 1 0 12 2L:20422983-20423034 6 9 415 FBgn0032859 3866.656667 244 375.5233333 0.002327592 0.036885246 0.023966553 -5 6 0.5 0.1 dme-miR-184-3p 6mer2-7 CCGTCC 2L 2043247 2043252 + 2L_2043247_2043252_+ 0.999999999 1 0.999999999 0 Su(dx) FBtr0339529|FBtr0077823|FBtr0077822|FBtr0077824|FBtr0334778 2043182|2043182|2043182|2043182|2043182 2043677|2044372|2044372|2044372|2043677 2L + 2043182 2043412 stop_codon Su(dx) FlyBase G1147.1 GAGTGGCAGTCGATTTGTGGTCGGTTTGTTGATTAATGTTTAATTCCAGTTAAGCGCCTGCTTTACCGTCCCCTCCCCCTTTCCATTTGACGACCACGTTGCGTTAAATAGTTACTGTTATTATTATTATTACATACGTATGTATTACTACTGTATACTGTAAACACGAAACACACACTTCTGTCTGTCTATTCCTATGTTCGCAACCGATATCACACGAGATATTTGTTA 522 2043245 0.978794256 37 507 3452 0.972580645 2.081347308 0.022580645 0.155172414 0.288709677 522 13 4 603 2L:2043182-2043412 6 Su(dx) FBtr0077824|FBtr0334778|FBtr0077823|FBtr0077822|FBtr0339529 2043182|2043182|2043182|2043182|2043182 2044372|2043677|2044372|2044372|2043677 CCGTCC 6mer2-7 dme-miR-184-3p 2L + 2043182 2043269 stop_codon Su(dx) FlyBase G903.2 GAGTGGCAGTCGATTTGTGGTCGGTTTGTTGATTAATGTTTAATTCCAGTTAAGCGCCTGCTTTACCGTCCCCTCCCCCTTTCCATTT 243 2043245 0.697044065 14 232 1494 0.943243243 1.940765436 0.008108108 0.386831276 0.597297297 243 18 3 349 2L:2043182-2043269 6 337.5 416 FBgn0003557 1814.713333 49.05333333 75.26666667 0.185979787 6.880266377 4.484056687 2 2 2 0.1 dme-miR-283-5p 8mer-m1 TGATATTT 2L 2043558 2043565 + 2L_2043558_2043565_+ 0.555589496 0.555593839 0.555591668 3.04E-06 Su(dx) FBtr0339529|FBtr0077823|FBtr0077822|FBtr0077824|FBtr0334778 2043182|2043182|2043182|2043182|2043182 2043677|2044372|2044372|2044372|2043677 2L + 2043486 2043576 3'utr Su(dx) FlyBase G1148.1 TTAGGCATAATTTATCCACTGCATAACTCTCCTGTGTAAATTTAAGACAAAGTTTGATTGATTCGCTTCTGTTGATATTTCTTACGACCAT 50 2043552 0.729324422 15 47 489 0.926470588 1.799340549 0.132352941 0.28 0.470588235 50 5 0 63 2L:2043486-2043576 8 Su(dx) FBtr0077824|FBtr0334778|FBtr0077823|FBtr0077822|FBtr0339529 2043182|2043182|2043182|2043182|2043182 2044372|2043677|2044372|2044372|2043677 TGATATTT 8mer-m1 dme-miR-283-5p 2L + 2043488 2043568 3'utr Su(dx) FlyBase G904.1 AGGCATAATTTATCCACTGCATAACTCTCCTGTGTAAATTTAAGACAAAGTTTGATTGATTCGCTTCTGTTGATATTTCTT 28 2043552 0.98874498 14 28 259 1 1.643452676 0.068181818 0.428571429 0.636363636 28 0 0 44 2L:2043488-2043568 8 19 417 FBgn0003557 1814.713333 49.05333333 75.26666667 0.010469973 0.387333515 0.252435784 6 6 6 0.1 dme-miR-34-5p 8mer-A1 CACTGCCA 2L 20443000 20443007 + 2L_20443000_20443007_+ 0.564886833 0.590243823 0.577565328 0.017930107 CG31688 FBtr0330661|FBtr0330203|FBtr0330204|FBtr0308895|FBtr0273378 20441856|20441889|20441889|20441856|20441856 20447905|20443944|20443944|20444823|20443944 2L + 20442982 20443028 3'utr CG31688 FlyBase G5593.1 CTTTGCCGCCACATACCGCACTGCCATGGTCGAGAGCAGCTCGCACG 21 20443008 0.887047371 2 19 56 0.956521739 1.342422681 0.130434783 0.095238095 0.173913043 21 1 0 22 2L:20442982-20443028 8 CG31688 FBtr0308895|FBtr0330204|FBtr0330203|FBtr0330661|FBtr0273378 20441856|20441889|20441889|20441856|20441856 20444823|20443944|20443944|20447905|20443944 CACTGCCA 8mer-A1 dme-miR-34-5p 2L + 20442985 20443024 3'utr CG31688 FlyBase G4348.1 TGCCGCCACATACCGCACTGCCATGGTCGAGAGCAGCTCG 9 20443008 0.898508352 2 8 27 0.8 1.079181246 0.2 0.555555556 0.733333333 9 3 0 12 2L:20442985-20443024 8 14.5 418 FBgn0263355 715.8866667 19.27333333 29.67 0.020254603 0.752334832 0.488709134 -8 -8 -8 0.1 dme-miR-92b-3p 6mer2-7 TGCAAT 2L 2044324 2044329 + 2L_2044324_2044329_+ 0.847172987 0.808166412 0.827669699 0.027581831 Su(dx) FBtr0077823|FBtr0077822|FBtr0077824 2043182|2043182|2043182 2044372|2044372|2044372 2L + 2044298 2044382 3'utr Su(dx) FlyBase G1151.1 TATTAAATAGATTTTATTTAGTTTAATGCAATGTGTACTGTATTATATAAAATAAATGCAAAATTATTTAGTGATACACGGCCGA 23 2044331 0.976351797 11 20 237 0.928571429 1.414973348 0.285714286 0.217391304 0.357142857 23 2 0 26 2L:2044298-2044382 6 Su(dx) FBtr0077824|FBtr0077823|FBtr0077822 2043182|2043182|2043182 2044372|2044372|2044372 TGCAAT 6mer2-7 dme-miR-92b-3p 2L + 2044313 2044355 3'utr Su(dx) FlyBase G905.1 ATTTAGTTTAATGCAATGTGTACTGTATTATATAAAATAAATG 14 2044330 0.74261912 7 12 150 0.913043478 1.322219295 0.173913043 0.571428571 0.739130435 14 2 0 21 2L:2044313-2044355 6 15 419 FBgn0003557 1814.713333 49.05333333 75.26666667 0.008265768 0.305789617 0.199291408 -7 -6 -6.5 0.1 dme-miR-34-5p 8mer-A1 CACTGCCA 2L 20452118 20452125 + 2L_20452118_20452125_+ 0.55153878 0.404747608 0.478143194 0.103797053 CG31687 FBtr0332968|FBtr0302224 20451413|20451413 20456978|20453935 2L + 20452088 20452143 3'utr CG31687 FlyBase G5603.1 GGAGACAAACTACTTTGCCGCCACATACCGCACTGCCATGGTCGAGAGCAGCTCGC 23 20452126 0.759484322 3 22 71 0.964285714 1.431363764 0.25 0.173913043 0.321428571 23 1 0 27 2L:20452088-20452143 8 CG31687 FBtr0302224|FBtr0332968 20451413|20451413 20453935|20456978 CACTGCCA 8mer-A1 dme-miR-34-5p 2L + 20452102 20452145 3'utr CG31687 FlyBase G4353.1 TTGCCGCCACATACCGCACTGCCATGGTCGAGAGCAGCTCGCAC 16 20452126 0.754764766 2 15 44 0.962962963 1.414973348 0.296296296 0.4375 0.666666667 16 1 0 26 2L:20452102-20452145 8 18.5 420 FBgn0051687 1365.03 44.63666667 68.55 0.013552816 0.414457471 0.269876003 -8 -8 -8 0.1 dme-miR-34-5p 7mer-A1 ACTGCCA 2L 20647246 20647252 + 2L_20647246_20647252_+ 0.70932974 0.696649363 0.702989551 0.008966326 CG2608 FBtr0081384 20646861 20647381 2L + 20647182 20647267 3'utr CG2608 FlyBase G5619.1 TGACAGCCTTGTATCGAGTGAGATTAGTTTTGTTGATTCAGATTAGTCACATGAAAGGTCTCTGACTGCCATGTAAATCATAAGTA 14 20647244 0.984343313 6 12 101 0.882352941 0.875061263 0.176470588 0.214285714 0.352941176 14 1 1 15 2L:20647182-20647267 7 CG2608 FBtr0081384 20646861 20647381 ACTGCCA 7mer-A1 dme-miR-34-5p 2L + 20647221 20647268 3'utr CG2608 FlyBase G4365.1 AGATTAGTCACATGAAAGGTCTCTGACTGCCATGTAAATCATAAGTAA 9 20647253 0.956937515 4 9 57 1 1.230448921 0.235294118 0.777777778 0.882352941 9 0 0 17 2L:20647221-20647268 7 9 421 FBgn0032870 618.86 51.52 79.05666667 0.014542869 0.174689441 0.113842392 2 -7 -2.5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2L 20650744 20650749 + 2L_20650744_20650749_+ 0.999813585 0.999894546 0.999854065 5.72E-05 CG2611 FBtr0081387 20650724 20650898 2L + 20650736 20650765 3'utr CG2611 FlyBase G5625.1 CCAAAGACACCAAATGTTTCGTCAAATAGA 8 20650750 0.971450825 3 7 40 0.9 0.954242509 0 0.25 0.4 8 1 0 9 2L:20650736-20650765 6 CG2611 FBtr0081387 20650724 20650898 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L + 20650738 20650768 3'utr CG2611 FlyBase G4371.1 AAAGACACCAAATGTTTCGTCAAATAGAGTT 6 20650752 0.967652711 3 5 33 1 1 0 0.5 0.7 6 0 0 10 2L:20650738-20650768 6 6.5 422 FBgn0032871 63.36 12.95666667 19.59 0.102588384 0.501672241 0.33180194 -6 -8 -7 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 2L 20730913 20730919 - 2L_20730913_20730919_- 0.520844878 0.520903654 0.520874266 4.16E-05 CG9318 FBtr0081393|FBtr0335149 20730643|20730414 20730999|20730999 2L - 20730809 20730974 3'utr CG9318 FlyBase G12008.1 TGCGAATGTATTTTTGTATGTGTAGCCACAAATTTACACTTAAGCCTAATGTGTGTGTGATTTCTGCGCTGTGCGCCCGGCACAGACAGTTTTCTGTTTACTATAATTACGATTGATATGTGTATAATAACATATGTTTGTATCAGGCAAGGAACAGTGGAGTAAC 93 20730913 0.985962272 25 92 775 0.990740741 2.029383778 0.231481481 0.139784946 0.259259259 93 1 0 107 2L:20730809-20730974 7 CG9318 FBtr0081393|FBtr0335149 20730643|20730414 20730999|20730999 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 20730886 20730957 3'utr CG9318 FlyBase G9212.1 ATGTGTAGCCACAAATTTACACTTAAGCCTAATGTGTGTGTGATTTCTGCGCTGTGCGCCCGGCACAGACAG 67 20730913 0.987733209 12 65 588 0.962264151 2.008600172 0.160377358 0.432835821 0.641509434 67 4 0 102 2L:20730886-20730957 7 65 423 FBgn0032880 1856.426667 79.74 121.9 0.035013503 0.815149235 0.533223954 -6 -6 -6 0.1 dme-miR-278-3p 6mer3-8 CCCACC 2L 20738935 20738940 + 2L_20738935_20738940_+ 0.999901998 0.999910611 0.999906304 6.08E-06 Fs(2)Ket FBtr0305587|FBtr0305586|FBtr0305585|FBtr0081392|FBtr0305584 20738901|20738901|20738901|20738901|20738901 20750941|20750941|20750941|20739764|20739764 2L + 20738895 20738969 stop_codon Fs(2)Ket FlyBase G5668.1 CGCAGTAGGCCACCTGCTAGAGGTTAATGTTTCTTCGCTTCCCACCAGACCCTCAAGATTGTGTGTAATGCAGTG 34 20738953 0.920342401 8 33 254 0.975609756 1.602059991 0.463414634 0.176470588 0.317073171 34 1 0 40 2L:20738895-20738969 6 Fs(2)Ket FBtr0305584|FBtr0081392|FBtr0305585|FBtr0305586|FBtr0305587 20738901|20738901|20738901|20738901|20738901 20739764|20739764|20750941|20750941|20750941 CCCACC 6mer3-8 dme-miR-278-3p 2L + 20738908 20738973 3'utr Fs(2)Ket FlyBase G4399.1 CTGCTAGAGGTTAATGTTTCTTCGCTTCCCACCAGACCCTCAAGATTGTGTGTAATGCAGTGAAAG 24 20738953 0.757483815 6 23 158 0.96969697 1.505149978 0.121212121 0.291666667 0.484848485 24 1 0 32 2L:20738908-20738973 6 19 424 FBgn0262743 4510.123333 82.11666667 125.5566667 0.004212745 0.231378121 0.151326094 -18 -18 -18 0.1 dme-miR-995-5p 6mer3-8 AATTCG 2L 20739317 20739322 + 2L_20739317_20739322_+ 0.952843703 0.970450013 0.961646858 0.012449534 Fs(2)Ket FBtr0305586|FBtr0305585|FBtr0081392|FBtr0305584 20738901|20738901|20738901|20738901 20750941|20750941|20739764|20739764 2L + 20739230 20739343 3'utr Fs(2)Ket FlyBase G5669.1 AAGTTTGTCCGATCTATTGTTGCTGTGCAACTTCTAAATGCTAAGACCACTTGTTTATAAAACTCCCTACCCACTAGCTGTAAGTTCAATTCGATCCACTGTTTCGACTCAATA 21 20739319 0.990909227 14 18 182 0.88 0.865301426 0.08 0.142857143 0.28 21 1 2 22 2L:20739230-20739343 6 Fs(2)Ket FBtr0305584|FBtr0081392|FBtr0305585|FBtr0305586 20738901|20738901|20738901|20738901 20739764|20739764|20750941|20750941 AATTCG 6mer3-8 dme-miR-995-5p 2L + 20739290 20739361 3'utr Fs(2)Ket FlyBase G4400.1 AACTCCCTACCCACTAGCTGTAAGTTCAATTCGATCCACTGTTTCGACTCAATATTTTAATTAAGGTCTGTT 11 20739332 0.991514087 6 10 112 0.928571429 1.113943352 0.285714286 0.272727273 0.428571429 11 1 0 13 2L:20739290-20739361 6 9.5 425 FBgn0262743 4510.123333 82.11666667 125.5566667 0.002106373 0.11568906 0.075663047 -2 -15 -8.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 20740044 20740050 + 2L_20740044_20740050_+ 0.780396745 0.775520208 0.777958477 0.003448206 Fs(2)Ket FBtr0305586|FBtr0305586|FBtr0305586|FBtr0305585|FBtr0305585|FBtr0305585 20738901|20738901|20738901|20738901|20738901|20738901 20750941|20750941|20750941|20750941|20750941|20750941 2L + 20739947 20740111 5'utr-coding Fs(2)Ket FlyBase G5673.1 TATGTACGTGGTATTTTGATTGCGACAAACCCCCGAAATGTTTGGAAACGGATGAGGATTCCCCCTTTCTGTGGCGCGCGTGTGCATCGGCGTGTTGTGTGATATTATGGATTAAGCGTAAGAACTTTTCTAGTGAAACGAATGATTTTAGACCTAAGCAAAACC 244 20740042 0.777988656 33 226 1966 0.929078014 2.117271296 0.460992908 0.118852459 0.237588652 244 19 1 262 2L:20739947-20740111 7 Fs(2)Ket FBtr0305585|FBtr0305585|FBtr0305585|FBtr0305586|FBtr0305586|FBtr0305586 20738901|20738901|20738901|20738901|20738901|20738901 20750941|20750941|20750941|20750941|20750941|20750941 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 20739895 20740106 5'utr-coding Fs(2)Ket FlyBase G4403.2 TACCCCTATGCCAATAGTTATGCTGTGATGGATGCTTGAGAGGAACTATGTCTATGTACGTGGTATTTTGATTGCGACAAACCCCCGAAATGTTTGGAAACGGATGAGGATTCCCCCTTTCTGTGGCGCGCGTGTGCATCGGCGTGTTGTGTGATATTATGGATTAAGCGTAAGAACTTTTCTAGTGAAACGAATGATTTTAGACCTAAGCA 159 20740042 0.986032248 32 146 1331 0.927419355 1.759667845 0.584677419 0.408805031 0.620967742 159 15 3 230 2L:20739895-20740106 7 114.5 426 FBgn0262743 4510.123333 82.11666667 125.5566667 0.025387332 1.394357621 0.911938832 2 2 2 0.1 dme-miR-932-5p 6mer3-8 GGAATT 2L 20749193 20749198 + 2L_20749193_20749198_+ 0.591720885 0.591720885 0.591720885 0 Fs(2)Ket FBtr0305586 20738901 20750941 2L + 20749151 20749217 3'utr Fs(2)Ket FlyBase G5679.1 AAGGGAACATTTGTTTTATCAGATTCGAACATATCAGAAATTGGAATTTGAAATGGCAACTTGGAGC 6 20749196 0.974645763 5 6 42 1 0.903089987 0.625 0.166666667 0.375 6 0 0 8 2L:20749151-20749217 6 Fs(2)Ket FBtr0305586 20738901 20750941 GGAATT 6mer3-8 dme-miR-932-5p 2L + 20749160 20749224 3'utr Fs(2)Ket FlyBase G4410.1 TTTGTTTTATCAGATTCGAACATATCAGAAATTGGAATTTGAAATGGCAACTTGGAGCACTTGAT 5 20749192 0.988272988 4 4 41 0.8 0.903089987 0.5 0.8 0.9 5 2 0 8 2L:20749160-20749224 6 4 427 FBgn0262743 4510.123333 82.11666667 125.5566667 0.000886894 0.048711183 0.031858125 -3 1 -1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 20749805 20749810 + 2L_20749805_20749810_+ 0.999994189 0.999999573 0.999996881 3.82E-06 Fs(2)Ket FBtr0305587|FBtr0305587|FBtr0305587|FBtr0305586|FBtr0305586|FBtr0305586|FBtr0305585|FBtr0305585|FBtr0305585 20738901|20738901|20738901|20738901|20738901|20738901|20738901|20738901|20738901 20750941|20750941|20750941|20750941|20750941|20750941|20750941|20750941|20750941 2L + 20749786 20749818 3'utr Fs(2)Ket FlyBase G5682.1 AAGAGTAGTGTGTTTGGAACTGTGACTGAGTAA 8 20749807 0.708485111 4 7 57 0.909090909 1 0 0.25 0.454545455 8 1 0 10 2L:20749786-20749818 6 Fs(2)Ket FBtr0305585|FBtr0305585|FBtr0305585|FBtr0305586|FBtr0305586|FBtr0305586|FBtr0305587|FBtr0305587|FBtr0305587 20738901|20738901|20738901|20738901|20738901|20738901|20738901|20738901|20738901 20750941|20750941|20750941|20750941|20750941|20750941|20750941|20750941|20750941 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 20749795 20749824 3'utr Fs(2)Ket FlyBase G4414.1 GTGTTTGGAACTGTGACTGAGTAAATTTGT 8 20749801 0.630032987 5 8 55 1 1 0 0.25 0.4 8 0 0 10 2L:20749795-20749824 6 8 428 FBgn0262743 4510.123333 82.11666667 125.5566667 0.001773787 0.097422367 0.06371625 -2 4 1 0.1 dme-miR-308-3p 8mer-m1 CTGTGATT 2L 20750127 20750134 + 2L_20750127_20750134_+ 0.385560239 0.38556034 0.385560289 7.07E-08 Fs(2)Ket FBtr0305587|FBtr0305586|FBtr0305585 20738901|20738901|20738901 20750941|20750941|20750941 2L + 20750104 20750186 3'utr Fs(2)Ket FlyBase G5683.1 TAAAAACACAACTGTAACATTGCCTGTGATTCATTCGATCATCTGTGTGTGGAGTGTACGCTGTGTGAAAGACTTGTGTGGAT 58 20750124 0.98960313 8 51 500 0.848484848 1.271066772 0.03030303 0.120689655 0.227272727 58 8 2 56 2L:20750104-20750186 8 Fs(2)Ket FBtr0305585|FBtr0305586|FBtr0305587 20738901|20738901|20738901 20750941|20750941|20750941 CTGTGATT 8mer-m1 dme-miR-308-3p 2L + 20750108 20750145 3'utr Fs(2)Ket FlyBase G4416.1 AACACAACTGTAACATTGCCTGTGATTCATTCGATCAT 31 20750124 0.774842722 7 29 254 0.9375 1.653212514 0.0625 0.483870968 0.666666667 31 3 0 45 2L:20750108-20750145 8 43.5 429 FBgn0262743 4510.123333 82.11666667 125.5566667 0.009644969 0.529734118 0.346457111 3 3 3 0.1 dme-miR-190-5p 6mer3-8 ACATAT 2L 20750332 20750337 + 2L_20750332_20750337_+ 0.977734233 1 0.988867117 0.015744298 Fs(2)Ket FBtr0305587|FBtr0305586|FBtr0305585 20738901|20738901|20738901 20750941|20750941|20750941 2L + 20750322 20750384 3'utr Fs(2)Ket FlyBase G5684.1 GAGAAACGTAACATATGGTACTGATTTTTATACTGAGAACTGAGACTTACTATATATACATAC 41 20750361 0.936290411 10 41 332 1 1.633468456 0 0.024390244 0.069767442 41 0 0 43 2L:20750322-20750384 6 Fs(2)Ket FBtr0305585|FBtr0305586|FBtr0305587 20738901|20738901|20738901 20750941|20750941|20750941 ACATAT 6mer3-8 dme-miR-190-5p 2L + 20750322 20750376 3'utr Fs(2)Ket FlyBase G4417.1 GAGAAACGTAACATATGGTACTGATTTTTATACTGAGAACTGAGACTTACTATAT 8 20750337 0.901373174 4 8 54 1 1.230448921 0 0.5 0.764705882 8 0 0 17 2L:20750322-20750376 6 10 430 FBgn0262743 4510.123333 82.11666667 125.5566667 0.002217234 0.121777958 0.079645313 -29 -5 -17 0.1 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 2L 20788624 20788629 + 2L_20788624_20788629_+ 0.999999067 0.999999983 0.999999525 6.36E-07 Pomp FBtr0081414 20788537 20789098 2L + 20788551 20788666 3'utr Pomp FlyBase G5710.1 GAAGTTGCTAAATGCCTGGCATTCAGCCTTTAAACTCTAAGACACTCTTAAGATCAGCAAATAAAATATATTTTGGTGCGACCAGCTAGAGGTAAACAAAATTCACCATTTCTTTG 42 20788623 0.706173228 19 39 254 0.886792453 1.070037867 0.113207547 0.238095238 0.396226415 42 3 3 47 2L:20788551-20788666 6 Pomp FBtr0081414 20788537 20789098 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 2L + 20788550 20788644 3'utr Pomp FlyBase G4437.1 TGAAGTTGCTAAATGCCTGGCATTCAGCCTTTAAACTCTAAGACACTCTTAAGATCAGCAAATAAAATATATTTTGGTGCGACCAGCTAGAGGTA 21 20788624 0.776688047 8 20 118 0.967741935 1.176091259 0.258064516 0.428571429 0.612903226 21 0 1 30 2L:20788550-20788644 6 13.5 431 FBgn0032884 886.4133333 100.35 153.2666667 0.015229915 0.134529148 0.088081775 1 0 0.5 0.1 dme-miR-31a-5p 6mer3-8 TCTTGC 2L 20813959 20813964 + 2L_20813959_20813964_+ 0.999290924 0.956026062 0.977658493 0.030592833 CG9328 FBtr0081416 20813711 20814331 2L + 20813656 20814022 stop_codon CG9328 FlyBase G5718.1 AATCCCGAGTATCTGAACGTGCGGGCCAAGCTGCGCACGGCGCACGCCAACAATTAAGGAGCAGCCCACTCGGATACCCCTCATCCTGTAATCCTCAGCCTATTTAATGTTTAGTTTTAGTAAGAGACCTAACCAAATTATGTGTAAGGAAACCATGTGTTTTATATGTTAACTTTGTGAGCGGTTTTCATTTTGATATTATGCAAAACTAGAGTTGATTATTATAATTAAAAATGTACACCTAGACTAAGCCATTTACTTGTTTAGTTTGTTAGTCCTTATCTCTAATCTAAGTTGAAGCTTTCTTGCGCTAAATTCGTTGTGTATAAACCAAGTGTATAAAGTTTTAGTTTCTAAAAGGACCCCA 257 20813961 0.987709092 60 244 2185 0.950331126 1.980760642 0.086092715 0.147859922 0.274834437 257 13 2 287 2L:20813656-20814022 6 CG9328 FBtr0081415|FBtr0081416 20813711|20813711 20814030|20814331 TCTTGC 6mer3-8 dme-miR-31a-5p 2L + 20813915 20813988 5'utr CG9328 FlyBase G4443.1 TTGTTTAGTTTGTTAGTCCTTATCTCTAATCTAAGTTGAAGCTTTCTTGCGCTAAATTCGTTGTGTATAAACCA 51 20813961 0.706274107 9 50 466 1 1.77815125 0.166666667 0.18 0.316666667 50 0 0 60 2L:20813915-20813988 6 56 432 FBgn0032886 2087.65 162.9466667 249.96 0.02682442 0.343670731 0.224035846 -2 -2 -2 0.1 dme-miR-932-5p 6mer2-7 GAATTG 2L 20871824 20871829 - 2L_20871824_20871829_- 0.999989956 0.999984809 0.999987382 3.68E-06 sky FBtr0081443|FBtr0330257|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081447|FBtr0081444|FBtr0330256|FBtr0081441|FBtr0081442|FBtr0081446 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 2L - 20871789 20871845 3'utr sky FlyBase G12037.1 AAATTGTTTTCTATCTGAATTGTTCTCAATGTGTAGTTTATATACAATATCTTGATA 58 20871826 0.98340103 9 57 639 0.987179487 1.886490725 0.115384615 0.293103448 0.474358974 58 1 0 77 2L:20871789-20871845 6 sky FBtr0081442|FBtr0081447|FBtr0081446|FBtr0330256|FBtr0081444|FBtr0081441|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081443|FBtr0330257 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 GAATTG 6mer2-7 dme-miR-932-5p 2L - 20871786 20871840 3'utr sky FlyBase G9231.1 GTTTTCTATCTGAATTGTTCTCAATGTGTAGTTTATATACAATATCTTGATAAAT 34 20871826 0.990208216 6 34 344 1 1.755874856 0.105263158 0.411764706 0.649122807 34 0 0 57 2L:20871786-20871840 6 43 433 FBgn0032901 1773.08 43.72 66.94 0.024251585 0.983531565 0.642366298 -3 -3 -3 0.1 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 20872586 20872593 - 2L_20872586_20872593_- 0.631136624 0.631136639 0.631136632 0 sky FBtr0081443|FBtr0330257|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081447|FBtr0081444|FBtr0330256|FBtr0081441|FBtr0081442|FBtr0081446 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 2L - 20872530 20872667 3'utr sky FlyBase G12041.1 ATTTTCAATACCAACGAAATTCTTTGCTCACCTCCACCTAAAAACTGCACGTACACAAAATTTTTGCACACTTTTCTAGTCAATTTTTATGTTTTACAAAAATAACATGGTGTGTCTCCTCCCATTTCCCTCTGGACG 186 20872594 0.914851519 22 176 1855 0.948717949 1.86923172 0.11965812 0.188172043 0.354700855 186 10 2 222 2L:20872530-20872667 8 sky FBtr0081442|FBtr0081447|FBtr0081446|FBtr0330256|FBtr0081444|FBtr0081441|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081443|FBtr0330257 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 20872526 20872625 3'utr sky FlyBase G9235.1 AACTGCACGTACACAAAATTTTTGCACACTTTTCTAGTCAATTTTTATGTTTTACAAAAATAACATGGTGTGTCTCCTCCCATTTCCCTCTGGACGAACA 138 20872594 0.990473723 17 133 1362 0.974358974 2.278753601 0.082051282 0.297101449 0.502564103 138 5 0 190 2L:20872526-20872625 8 141.5 434 FBgn0032901 1773.08 43.72 66.94 0.079804634 3.236505032 2.113833284 1 1 1 0.1 dme-bantam-3p 8mer-A1 TGATCTCA 2L 20872779 20872786 - 2L_20872779_20872786_- 0.627464066 0.627079159 0.627271612 0.000272165 sky FBtr0081443|FBtr0330257|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081447|FBtr0081444|FBtr0330256|FBtr0081441|FBtr0081442|FBtr0081446 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 2L - 20872764 20872844 3'utr sky FlyBase G12043.1 AAATAAGTTGAAGGAACGATTGGGCAGTGGAGAGCTGCCATGTGCCACCATGTGCAATTGATCTCAAAACGAAAAACGAAA 1074 20872787 0.830645749 11 1049 5578 0.979405034 1.932473765 0.439359268 0.175977654 0.324942792 1074 13 14 1284 2L:20872764-20872844 8 sky FBtr0081442|FBtr0081447|FBtr0081446|FBtr0330256|FBtr0081444|FBtr0081441|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081443|FBtr0330257 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 TGATCTCA 8mer-A1 dme-bantam-3p 2L - 20872766 20872872 3'utr sky FlyBase G9236.1 GCGGAATTTGTAGTCGGTTCAAAGTCCAAAATAAGTTGAAGGAACGATTGGGCAGTGGAGAGCTGCCATGTGCCACCATGTGCAATTGATCTCAAAACGAAAAACGA 647 20872787 0.963957029 13 634 3280 0.97718254 2.090346244 0.446428571 0.404945904 0.618055556 647 16 7 985 2L:20872766-20872872 8 842 435 FBgn0032901 1773.08 43.72 66.94 0.47487987 19.2589204 12.57842844 1 1 1 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 2L 20873124 20873129 - 2L_20873124_20873129_- 0.905938625 0.641471041 0.773704833 0.187006833 sky FBtr0081443|FBtr0330257|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081445|FBtr0081447|FBtr0081444|FBtr0330256|FBtr0081441|FBtr0081442|FBtr0081446 20871333|20871333|20871333|20871333|20871333|20872993|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 2L - 20873090 20873159 3'utr sky FlyBase G12045.1 TTTTTCTTTCTGTAAACCAAATTTACTGACTTGACTGAATTCGTTATTAATGTTATTAATATTATTATTG 97 20873132 0.983889909 10 91 844 0.933333333 1.748188027 0.041666667 0.18556701 0.341666667 97 7 1 112 2L:20873090-20873159 6 sky FBtr0081442|FBtr0081447|FBtr0081446|FBtr0330256|FBtr0081444|FBtr0081441|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081445|FBtr0081443|FBtr0330257 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20872993|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 TTGACT 6mer3-8 dme-miR-1012-3p 2L - 20873104 20873177 3'utr sky FlyBase G9237.1 TTAATTTATGAAACTGTATTTTTCTTTCTGTAAACCAAATTTACTGACTTGACTGAATTCGTTATTAATGTTAT 64 20873132 0.66544607 13 62 539 0.975 1.414973348 0.0125 0.21875 0.375 64 0 2 78 2L:20873104-20873177 6 76 436 FBgn0032901 1773.08 43.72 66.94 0.042863266 1.738334858 1.135345085 3 3 3 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 20873435 20873440 - 2L_20873435_20873440_- 0.751435034 0.755343057 0.753389045 0.002763444 sky FBtr0081443|FBtr0081443|FBtr0081443|FBtr0330257|FBtr0330257|FBtr0330257|FBtr0301961|FBtr0301961|FBtr0301961|FBtr0330255|FBtr0330255|FBtr0330255|FBtr0081440|FBtr0081440|FBtr0081440|FBtr0081445|FBtr0081445|FBtr0081445|FBtr0081447|FBtr0081447|FBtr0081447|FBtr0081444|FBtr0081444|FBtr0081444|FBtr0330256|FBtr0330256|FBtr0330256|FBtr0081441|FBtr0081441|FBtr0081441|FBtr0081442|FBtr0081442|FBtr0081442|FBtr0081446|FBtr0081446|FBtr0081446 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20872993|20872993|20872993|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 2L - 20873407 20873569 3'utr sky FlyBase G12049.1 AAGCTTATTTATAAAAATGTATCGAAAGTGGCCAAGCAGCAGTAAATGCTGCCGTCGTCGTGTTAATGTTAAATGTTAATGAAAAAATGCAAAGCTAAAACAAATTATATATTATATAATGGAAATACTCTGTGAGTTCATGTTTCAAAACGCAAAGCTTTGA 76 20873433 0.988552082 15 67 538 0.869047619 1.562292864 0.083333333 0.105263158 0.19047619 76 10 1 73 2L:20873407-20873569 6 sky FBtr0081442|FBtr0081442|FBtr0081442|FBtr0081447|FBtr0081447|FBtr0081447|FBtr0081446|FBtr0081446|FBtr0081446|FBtr0330256|FBtr0330256|FBtr0330256|FBtr0081444|FBtr0081444|FBtr0081444|FBtr0081441|FBtr0081441|FBtr0081441|FBtr0301961|FBtr0301961|FBtr0301961|FBtr0330255|FBtr0330255|FBtr0330255|FBtr0081440|FBtr0081440|FBtr0081440|FBtr0081445|FBtr0081445|FBtr0081445|FBtr0081443|FBtr0081443|FBtr0081443|FBtr0330257|FBtr0330257|FBtr0330257 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20872993|20872993|20872993|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 20873335 20873459 3'utr sky FlyBase G9240.1 ATTATATAATGGAAATACTCTGTGAGTTCATGTTTCAAAACGCAAAGCTTTGAAATTACAATACCCTAGTTGTTATAACCCCTTTACATACGTATATACATGATATCTATACAAACAAGTATATA 50 20873433 0.98032649 14 47 335 0.956521739 1.51851394 0.144927536 0.3 0.492753623 50 2 1 66 2L:20873335-20873459 6 47.5 437 FBgn0032901 1773.08 43.72 66.94 0.026789541 1.086459286 0.709590678 -7 -7 -7 0.1 dme-miR-283-5p 6mer2-7 GATATT 2L 20873720 20873725 - 2L_20873720_20873725_- 0.999974571 1 0.999987285 1.80E-05 sky FBtr0081443|FBtr0330257|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081445|FBtr0081447|FBtr0081444|FBtr0330256|FBtr0081441|FBtr0081442|FBtr0081446 20871333|20871333|20871333|20871333|20871333|20872993|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 2L - 20873676 20873778 stop_codon sky FlyBase G12050.1 CTGGAAGTCTACGGATTCGTGGGCATCTAAAAACCTTCTTTCTTAGTCTGACCGATATTGCCCGCCGATGATCAAGTGCTCAGCAAAACTGCTCGACGTTCCC 25 20873736 0.978455624 13 25 169 1 1.505149978 0.03125 0.24 0.40625 25 0 0 32 2L:20873676-20873778 6 sky FBtr0081442|FBtr0081447|FBtr0081446|FBtr0330256|FBtr0081444|FBtr0081441|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081445|FBtr0081443|FBtr0330257 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20872993|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 GATATT 6mer2-7 dme-miR-283-5p 2L - 20873674 20873748 3'utr sky FlyBase G9243.1 AAACCTTCTTTCTTAGTCTGACCGATATTGCCCGCCGATGATCAAGTGCTCAGCAAAACTGCTCGACGTTCCCCC 13 20873735 0.830357217 8 12 70 0.952380952 1.301029996 0.19047619 0.384615385 0.619047619 13 1 0 20 2L:20873674-20873748 6 14.5 438 FBgn0032901 1773.08 43.72 66.94 0.00817786 0.331655993 0.216611891 11 10 10.5 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2L 20919164 20919169 - 2L_20919164_20919169_- 0.706016673 0.719058561 0.712537617 0.009222016 Mtp FBtr0081439 20919092 20919238 2L - 20919125 20919222 3'utr Mtp FlyBase G12065.1 TATTGGAGATTCCTTGCATAAAAACTATATTTCTATGTGAAAACTCAGAGATTAAGACTCGATATAGTTGTAAACTTAAACGAACAAAGACCATTTAA 50 20919171 0.982220912 9 46 337 0.93220339 1.439332694 0.271186441 0.18 0.305084746 50 3 1 55 2L:20919125-20919222 6 Mtp FBtr0081439 20919092 20919238 AAGACT 6mer3-8 dme-miR-14-3p 2L - 20919131 20919198 3'utr Mtp FlyBase G9252.1 CTATATTTCTATGTGAAAACTCAGAGATTAAGACTCGATATAGTTGTAAACTTAAACGAACAAAGACC 22 20919171 0.977658197 5 21 141 0.965517241 1.447158031 0.413793103 0.272727273 0.448275862 22 1 0 28 2L:20919131-20919198 6 30 439 FBgn0266369 334.6733333 13.78 21.06333333 0.089639649 2.177068215 1.424275993 2 2 2 0.1 dme-miR-184-3p 7mer-m8 TCCGTCC 2L 20965583 20965589 - 2L_20965583_20965589_- 0.66159691 0.661601098 0.661599004 2.97E-06 CG42238 FBtr0290305|FBtr0331200|FBtr0331199|FBtr0290306 20965518|20965518|20965518|20965518 20967385|20967385|20967385|20967385 2L - 20965555 20965607 3'utr CG42238 FlyBase G12079.1 TACAAATTATTAACTGATTCCGTCCGCACCCTGACAACTGTGTTAACTAACTT 444 20965590 0.741900509 9 440 2489 0.99255121 2.425697213 0.009310987 0.177927928 0.320297952 444 3 1 533 2L:20965555-20965607 7 CG42238 FBtr0290306|FBtr0331199|FBtr0331200|FBtr0290305 20965518|20965518|20965518|20965518 20967385|20967385|20967385|20967385 TCCGTCC 7mer-m8 dme-miR-184-3p 2L - 20965549 20965606 3'utr CG42238 FlyBase G9257.1 ACAAATTATTAACTGATTCCGTCCGCACCCTGACAACTGTGTTAACTAACTTTAAGAT 230 20965590 0.963040554 7 227 1277 0.983651226 2.557507202 0 0.386956522 0.615803815 230 6 0 361 2L:20965549-20965606 7 335.5 440 FBgn0250867 324.93 11.38 17.49333333 1.032530083 29.48154657 19.17873476 1 1 1 0.1 dme-miR-14-3p 6mer2-7 AGACTG 2L 20965825 20965830 - 2L_20965825_20965830_- 0.999999098 0.999999999 0.999999548 6.36E-07 CG42238 FBtr0290305|FBtr0331200|FBtr0331199|FBtr0290306 20965518|20965518|20965518|20965518 20967385|20967385|20967385|20967385 2L - 20965803 20965843 3'utr CG42238 FlyBase G12080.1 TCAAATCGCCTATAGACTGTAGCACTATAGCTAAAAGGTAT 10 20965832 0.955877721 2 10 51 1 1.113943352 0 0.3 0.461538462 10 0 0 13 2L:20965803-20965843 6 CG42238 FBtr0290306|FBtr0331199|FBtr0331200|FBtr0290305 20965518|20965518|20965518|20965518 20967385|20967385|20967385|20967385 AGACTG 6mer2-7 dme-miR-14-3p 2L - 20965811 20965848 3'utr CG42238 FlyBase G9258.1 AAACGTCAAATCGCCTATAGACTGTAGCACTATAGCTA 5 20965831 0.956116811 3 5 26 1 0.84509804 0 0.2 0.428571429 5 0 0 7 2L:20965811-20965848 6 7.5 441 FBgn0250867 324.93 11.38 17.49333333 0.023081895 0.659050967 0.428734756 2 1 1.5 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2L 210153 210158 + 2L_210153_210158_+ 0.998430774 0.668486777 0.833458775 0.23330564 Tbc1d15-17 FBtr0332339|FBtr0332338|FBtr0078125 209857|209857|209857 210725|210506|210506 2L + 210116 210224 3'utr Tbc1d15-17 FlyBase G641.1 GTAAACAAAACATTGGAGCAGTGTTAGCTTAGACTATAAGACTTAAAGTTTACTCTCGCATCGAAGCTAAGCGAGGCGGGCCAAGCGGATACACTGATTTATATATTGT 33 210152 0.979907854 12 32 227 0.972972973 1.255272505 0.135135135 0.121212121 0.216216216 33 0 1 36 2L:210116-210224 6 Tbc1d15-17 FBtr0332338|FBtr0332339|FBtr0078125 209857|209857|209857 210506|210725|210506 AAGACT 6mer3-8 dme-miR-14-3p 2L + 210124 210175 3'utr Tbc1d15-17 FlyBase G513.1 AACATTGGAGCAGTGTTAGCTTAGACTATAAGACTTAAAGTTTACTCTCGCA 14 210151 0.733615063 6 14 96 1 1.301029996 0.2 0.428571429 0.6 14 0 0 20 2L:210124-210175 6 18 442 FBgn0031233 273.62 11.06666667 17.00333333 0.065784665 1.626506024 1.058615958 1 2 1.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 210427 210432 + 2L_210427_210432_+ 0.999993558 1 0.999996779 4.53E-06 Tbc1d15-17 FBtr0332339|FBtr0332339|FBtr0332339|FBtr0332338|FBtr0332338|FBtr0332338|FBtr0078125|FBtr0078125|FBtr0078125 209857|209857|209857|209857|209857|209857|209857|209857|209857 210725|210725|210725|210506|210506|210506|210506|210506|210506 2L + 210410 210448 3'utr Tbc1d15-17 FlyBase G643.1 TTAAGTTTAGTCAATTACTGTGAATATACATCCGTATAC 16 210434 0.732856639 4 12 143 0.705882353 1.079181246 0.058823529 0.0625 0.117647059 16 5 0 12 2L:210410-210448 6 Tbc1d15-17 FBtr0332338|FBtr0332338|FBtr0332338|FBtr0332339|FBtr0332339|FBtr0332339|FBtr0078125|FBtr0078125|FBtr0078125 209857|209857|209857|209857|209857|209857|209857|209857|209857 210506|210506|210506|210725|210725|210725|210506|210506|210506 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 210412 210448 3'utr Tbc1d15-17 FlyBase G517.1 AAGTTTAGTCAATTACTGTGAATATACATCCGTATAC 12 210425 0.676549666 5 11 100 0.9375 1.176091259 0 0.25 0.4375 12 1 0 15 2L:210412-210448 6 14 443 FBgn0031233 273.62 11.06666667 17.00333333 0.05116585 1.265060241 0.823367967 -7 2 -2.5 0.1 dme-miR-34-5p 7mer-A1 ACTGCCA 2L 210572 210578 + 2L_210572_210578_+ 0.821040689 0.815982428 0.818511559 0.003576758 Tbc1d15-17 FBtr0332339 209857 210725 2L + 210555 210593 3'utr Tbc1d15-17 FlyBase G645.1 AATCCATCAAGAACTTGACTGCCATTTGTATTCGGGTGG 5 210569 0.960334428 2 5 35 1 0.77815125 0.666666667 0.2 0.333333333 5 0 0 6 2L:210555-210593 7 Tbc1d15-17 FBtr0332339 209857 210725 ACTGCCA 7mer-A1 dme-miR-34-5p 2L + 210559 210593 3'utr Tbc1d15-17 FlyBase G518.1 CATCAAGAACTTGACTGCCATTTGTATTCGGGTGG 5 210580 0.930714971 2 3 32 0.571428571 0.602059991 0.571428571 0.4 0.571428571 5 3 0 4 2L:210559-210593 7 4.5 444 FBgn0031233 273.62 11.06666667 17.00333333 0.016446166 0.406626506 0.264653989 3 -8 -2.5 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 2L 21103985 21103991 + 2L_21103985_21103991_+ 0.372269083 0.520192142 0.446230613 0.104597356 CG9257 FBtr0081465 21103925 21104321 2L + 21103851 21104023 stop_codon CG9257 FlyBase G5736.2 CTCATCGATCTTGCTACCAGTTTTCATCGCCATCGGGGCCTTTATACCACTGCTGTTCTGCCTCTGCAAGCTGTGATCCCCATCCGTTGCTCACTCAACGCTTTCGCCTGCGTTGGTTTCCTGCTTTGTGATTTTGTGATTTTGATAAAAGACTTAATTATATACTTATCGTT 218 21103991 0.988755642 36 196 2355 0.904411765 1.545837067 0.25 0.178899083 0.341911765 218 20 6 246 2L:21103851-21104023 7 CG9257 FBtr0081465 21103925 21104321 TGTGATT 7mer-m1 dme-miR-308-3p 2L + 21103884 21104029 stop_codon CG9257 FlyBase G4458.1 CGGGGCCTTTATACCACTGCTGTTCTGCCTCTGCAAGCTGTGATCCCCATCCGTTGCTCACTCAACGCTTTCGCCTGCGTTGGTTTCCTGCTTTGTGATTTTGTGATTTTGATAAAAGACTTAATTATATACTTATCGTTTAGTTC 167 21103983 0.879128559 31 159 1852 0.952380952 1.77815125 0.186507937 0.329341317 0.555555556 167 9 3 240 2L:21103884-21104029 7 143 445 FBgn0032916 272.05 21.3 32.82666667 0.525638669 6.713615023 4.35621446 -6 2 -2 0.1 dme-miR-34-5p 7mer-A1 ACTGCCA 2L 21136321 21136327 - 2L_21136321_21136327_- 0.823054499 0.822626792 0.822840646 0.00030243 Dap160 FBtr0333087|FBtr0333086 21135274|21135274 21137095|21137095 2L - 21136307 21136359 3'utr Dap160 FlyBase G12107.1 TGATTTATTGACTAAGTTAAGCGCTTATCTGAACTGCCATAACTGTATTAATT 49 21136330 0.795762379 7 47 358 0.962962963 1.238882089 0.111111111 0.040816327 0.12962963 49 0 2 52 2L:21136307-21136359 7 Dap160 FBtr0333086|FBtr0333087 21135274|21135274 21137095|21137095 ACTGCCA 7mer-A1 dme-miR-34-5p 2L - 21136306 21136352 3'utr Dap160 FlyBase G9277.1 TTGACTAAGTTAAGCGCTTATCTGAACTGCCATAACTGTATTAATTT 43 21136330 0.787847382 6 41 323 1 1.763427994 0.275862069 0.302325581 0.482758621 43 0 0 58 2L:21136306-21136352 7 44 446 FBgn0023388 1725.443333 51.01 78.44666667 0.025500693 0.862575965 0.560890626 3 3 3 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 2L 21137286 21137292 - 2L_21137286_21137292_- 0.521223855 0.521223855 0.521223855 0 Dap160 FBtr0081504|FBtr0081503|FBtr0301276 21137129|21137129|21137129 21137476|21137476|21137476 2L - 21137180 21137376 5'utr Dap160 FlyBase G12110.1 AAGTTCTCGCCTATTCTCGCTATTGAAACCCCCACTTTAGTGTTTATTTGTTGCAATATTTCCAAGATGTATCTAATTGTTAATTGTGATTATTTAGTTTTTAGATTTACTCCTAAGCTTATCACTAGCGACCTCTCTATTTTCGCTTAGCTAATTTCTAGTGTTATTTCATTTATGTATTTATTTAGTCGGCATAA 81 21137293 0.995423466 30 71 1049 0.87628866 1.62838893 0.164948454 0.172839506 0.309278351 81 11 1 85 2L:21137180-21137376 7 Dap160 FBtr0301276|FBtr0081503|FBtr0081504 21137129|21137129|21137129 21137476|21137476|21137476 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 21137212 21137320 5'utr Dap160 FlyBase G9278.1 TATTTCCAAGATGTATCTAATTGTTAATTGTGATTATTTAGTTTTTAGATTTACTCCTAAGCTTATCACTAGCGACCTCTCTATTTTCGCTTAGCTAATTTCTAGTGTT 58 21137293 0.995472367 22 53 786 0.928571429 1.414973348 0.130952381 0.362068966 0.55952381 58 4 2 78 2L:21137212-21137320 7 45 447 FBgn0023388 1725.443333 51.01 78.44666667 0.026080254 0.882179965 0.573638141 1 1 1 0.1 dme-miR-276a-3p 7mer-A1 GTTCCTA 2L 21145189 21145195 - 2L_21145189_21145195_- 0.823349235 0.823349305 0.82334927 7.07E-08 del FBtr0333085|FBtr0333084|FBtr0081502 21145135|21145135|21145135 21145298|21145298|21145298 2L - 21145177 21145216 3'utr del FlyBase G12127.1 AAATTAAGTTATCAAATTATTGTTCCTATTTGATTATTAC 47 21145197 0.729575614 9 46 557 0.963636364 1.72427587 0.036363636 0.170212766 0.290909091 47 2 0 53 2L:21145177-21145216 7 del FBtr0333084|FBtr0081502|FBtr0333085 21145135|21145135|21145135 21145298|21145298|21145298 GTTCCTA 7mer-A1 dme-miR-276a-3p 2L - 21145176 21145263 3'utr del FlyBase G9290.1 CTTGACATATATCATAATCTCTTCATTATTGATGCACATAATTGAATAAATTAAGTTATCAAATTATTGTTCCTATTTGATTATTACA 38 21145197 0.910733043 13 38 443 1 1.770852012 0.203389831 0.368421053 0.593220339 38 0 0 59 2L:21145176-21145263 7 39 448 FBgn0086251 92 3.553333333 5.473333333 0.423913043 10.97560976 7.12545676 2 2 2 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 21160797 21160802 - 2L_21160797_21160802_- 0.999999912 0.999999993 0.999999953 7.07E-08 Nbr FBtr0081499 21160634 21161011 2L - 21160764 21160816 3'utr Nbr FlyBase G12152.1 ATCAGAAGGAAACTATGTGACTGCGAGCAGGATATGAAAGAATGAATTTTATT 55 21160801 0.715927094 7 55 225 1 1.785329835 0.213114754 0.109090909 0.196721311 55 0 0 61 2L:21160764-21160816 6 Nbr FBtr0081499 21160634 21161011 ATGTGA 6mer3-8 dme-miR-1003-3p 2L - 21160721 21160825 3'utr Nbr FlyBase G9309.1 ATGTTACAAATCAGAAGGAAACTATGTGACTGCGAGCAGGATATGAAAGAATGAATTTTATTACGTTATGATTTCAAGCTCACTGTATCTCCATACTTTAAATAC 76 21160800 0.756674088 11 74 396 0.975409836 1.774516966 0.172131148 0.434210526 0.647540984 76 2 1 119 2L:21160721-21160825 6 45.5 449 FBgn0032924 175.9366667 9.03 13.69333333 0.25861579 5.03875969 3.32278481 -1 -2 -1.5 0.1 dme-miR-7-5p 6mer2-7 TCTTCC 2L 21172700 21172705 + 2L_21172700_21172705_+ 0.999967142 1 0.999983571 2.33E-05 Acon FBtr0300425|FBtr0346587|FBtr0343871 21172647|21172647|21172647 21173017|21173184|21173185 2L + 21172631 21172761 stop_codon Acon FlyBase G5785.1 AAGGAGCTGGCCCAGTAAATGGTCCTGGACCTACTTAAGACACCCAGTCAAGAAGCCTGATCCCAACCTTCTTCCTGTAGGTGAACACACTCAAATTCACAACGGAAGCAATCGAATTATGGTATTGTTAT 21 21172701 0.967201718 14 19 103 0.964285714 1.431363764 0.071428571 0.285714286 0.464285714 21 1 0 27 2L:21172631-21172761 6 Acon FBtr0081473|FBtr0346587|FBtr0343871|FBtr0300425 21172647|21172647|21172647|21172647 21172895|21173184|21173185|21173017 TCTTCC 6mer2-7 dme-miR-7-5p 2L + 21172668 21172740 3'utr Acon FlyBase G4492.2 AGACACCCAGTCAAGAAGCCTGATCCCAACCTTCTTCCTGTAGGTGAACACACTCAAATTCACAACGGAAGCA 16 21172711 0.965395777 7 11 58 0.681818182 1.176091259 0.136363636 0.375 0.545454545 16 7 0 15 2L:21172668-21172740 6 7 450 FBgn0010100 1510.516667 65.87 100.8933333 0.004634176 0.106269926 0.069380204 -1 -11 -6 0.1 dme-miR-317-5p 6mer3-8 GTATCC 2L 21212752 21212757 - 2L_21212752_21212757_- 0.857638791 0.999997105 0.928817948 0.100662519 Atg18b FBtr0081487|FBtr0331678 21212691|21212320 21213065|21213065 2L - 21212730 21212767 3'utr Atg18b FlyBase G12187.1 ATCAAACTCTGTATCCTTTAGAAACGTAGGTATAAGTG 6 21212750 0.773786343 2 6 49 1 0.903089987 0 0.166666667 0.375 6 0 0 8 2L:21212730-21212767 6 Atg18b FBtr0081487|FBtr0331678 21212691|21212320 21213065|21213065 GTATCC 6mer3-8 dme-miR-317-5p 2L - 21212730 21212779 3'utr Atg18b FlyBase G9337.1 CTTAGGCACTAAATCAAACTCTGTATCCTTTAGAAACGTAGGTATAAGTG 5 21212750 0.981768717 3 5 38 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2L:21212730-21212779 6 5 451 FBgn0032935 177.3333333 8.876666667 13.63666667 0.028195489 0.563274502 0.366658519 -7 -7 -7 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 21212838 21212843 - 2L_21212838_21212843_- 0.999701409 0.999739573 0.999720491 2.70E-05 Atg18b FBtr0081487|FBtr0331678 21212691|21212320 21213065|21213065 2L - 21212824 21212868 3'utr Atg18b FlyBase G12188.1 TGGATGTATGTATGTATATAGAAATGTACCTAAAAGAATTTCACA 127 21212844 0.830497384 2 126 624 0.993939394 2.214843848 0.060606061 0.220472441 0.4 127 1 0 164 2L:21212824-21212868 6 Atg18b FBtr0081487|FBtr0331678 21212691|21212320 21213065|21213065 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L - 21212795 21212865 3'utr Atg18b FlyBase G9338.1 ATGTATGTATGTATATAGAAATGTACCTAAAAGAATTTCACATAAAAATCTAGATATTCTTGTGTTAGTTT 83 21212844 0.961400997 4 81 408 0.983870968 2.086359831 0.064516129 0.34939759 0.564516129 83 2 0 122 2L:21212795-21212865 6 103 452 FBgn0032935 177.3333333 8.876666667 13.63666667 0.580827068 11.60345475 7.553165485 1 1 1 0.1 dme-miR-986-5p 7mer-A1 TTCGAGA 2L 21213031 21213037 - 2L_21213031_21213037_- 0.821360744 0.703564563 0.762462653 0.083294421 Atg18b FBtr0081487|FBtr0331678 21212691|21212320 21213065|21213065 2L - 21213007 21213080 stop_codon Atg18b FlyBase G12189.1 ACCGCTAAGGATTGACTACGTAACCGTAACATCAAGGATATGGTTCGAGATAATAGACAGCAGAATTTTTAAGC 34 21213027 0.945303711 6 34 154 1 1.579783597 0.289473684 0.117647059 0.210526316 34 0 0 38 2L:21213007-21213080 7 Atg18b FBtr0081487|FBtr0331678 21212691|21212320 21213065|21213065 TTCGAGA 7mer-A1 dme-miR-986-5p 2L - 21213006 21213041 3'utr Atg18b FlyBase G9339.1 ATGGTTCGAGATAATAGACAGCAGAATTTTTAAGCA 15 21213027 0.934248509 2 15 61 1 1.255272505 0.388888889 0.133333333 0.277777778 15 0 0 18 2L:21213006-21213041 7 22.5 453 FBgn0032935 177.3333333 8.876666667 13.63666667 0.126879699 2.534735261 1.649963334 -10 -10 -10 0.1 dme-miR-999-3p 6mer3-8 AGTTAA 2L 21231161 21231166 + 2L_21231161_21231166_+ 0.931886894 0.895534991 0.913710943 0.025704675 CG8677 FBtr0346586|FBtr0331677 21231107|21231107 21232059|21231692 2L + 21231129 21231171 3'utr CG8677 FlyBase G5817.1 ATTTAAATTTGTATATATCGATCTGCTTGTAAAGTTAAAAAAC 26 21231155 0.70602144 7 26 224 1 1.505149978 0.21875 0.230769231 0.375 26 0 0 32 2L:21231129-21231171 6 CG8677 FBtr0346586|FBtr0331677 21231107|21231107 21232059|21231692 AGTTAA 6mer3-8 dme-miR-999-3p 2L + 21231100 21231171 stop_codon CG8677 FlyBase G4519.1 GACACATAACAAACGCCGGCGGGAGCATTATTTAAATTTGTATATATCGATCTGCTTGTAAAGTTAAAAAAC 26 21231156 0.991159164 5 22 232 0.828571429 0.985276743 0.085714286 0.230769231 0.428571429 26 4 2 29 2L:21231100-21231171 6 18 454 FBgn0026577 1892.863333 25.80333333 39.86666667 0.009509403 0.697584291 0.451505017 6 5 5.5 0.1 dme-miR-79-3p 6mer2-7 AGCTTT 2L 21231222 21231227 + 2L_21231222_21231227_+ 0.857034419 0.558386174 0.707710297 0.211176167 CG8677 FBtr0346586|FBtr0331677 21231107|21231107 21232059|21231692 2L + 21231172 21231232 3'utr CG8677 FlyBase G5818.1 AATTTTACTTTAGGGCTAGAAATCAATCTTGGCAATACTTTACCAATATAAGCTTTGTGTT 10 21231200 0.894799332 5 10 79 1 1.041392685 0 0.1 0.181818182 10 0 0 11 2L:21231172-21231232 6 CG8677 FBtr0346586|FBtr0331677 21231107|21231107 21232059|21231692 AGCTTT 6mer2-7 dme-miR-79-3p 2L + 21231176 21231238 3'utr CG8677 FlyBase G4520.1 TTACTTTAGGGCTAGAAATCAATCTTGGCAATACTTTACCAATATAAGCTTTGTGTTTAAACT 5 21231223 0.991523085 5 5 51 1 0.84509804 0 0.4 0.571428571 5 0 0 7 2L:21231176-21231238 6 3 455 FBgn0026577 1892.863333 25.80333333 39.86666667 0.0015849 0.116264049 0.075250836 22 -1 10.5 0.1 dme-miR-305-3p 6mer3-8 ATGTGC 2L 21231411 21231416 + 2L_21231411_21231416_+ 0.999997439 0.974676383 0.987336911 0.017904651 CG8677 FBtr0346586|FBtr0331677 21231107|21231107 21232059|21231692 2L + 21231401 21231488 3'utr CG8677 FlyBase G5819.2 AGTTCCCTTTATGTGCTGTTACAGTTTAGCTAAATCAAGCATCAACTACTTTTAGTATTTTAATTTAGCTCTATATGATTTGAGCCCT 14 21231412 0.879832397 7 13 137 0.944444444 1.230448921 0.166666667 0.142857143 0.333333333 14 1 0 17 2L:21231401-21231488 6 CG8677 FBtr0346586|FBtr0331677 21231107|21231107 21232059|21231692 ATGTGC 6mer3-8 dme-miR-305-3p 2L + 21231392 21231486 3'utr CG8677 FlyBase G4522.1 ATTTAACTTAGTTCCCTTTATGTGCTGTTACAGTTTAGCTAAATCAAGCATCAACTACTTTTAGTATTTTAATTTAGCTCTATATGATTTGAGCC 16 21231412 0.909646223 7 15 159 0.958333333 1.361727836 0 0.375 0.583333333 16 1 0 23 2L:21231392-21231486 6 5 456 FBgn0026577 1892.863333 25.80333333 39.86666667 0.002641501 0.193773414 0.12541806 -1 -1 -1 0.1 dme-miR-8-3p 6mer2-7 AGTATT 2L 21231454 21231459 + 2L_21231454_21231459_+ 0.99999864 0.999974834 0.999986737 1.68E-05 CG8677 FBtr0346586|FBtr0331677 21231107|21231107 21232059|21231692 2L + 21231401 21231488 3'utr CG8677 FlyBase G5819.2 AGTTCCCTTTATGTGCTGTTACAGTTTAGCTAAATCAAGCATCAACTACTTTTAGTATTTTAATTTAGCTCTATATGATTTGAGCCCT 14 21231452 0.879832397 7 13 137 0.944444444 1.230448921 0.166666667 0.142857143 0.333333333 14 1 0 17 2L:21231401-21231488 6 CG8677 FBtr0346586|FBtr0331677 21231107|21231107 21232059|21231692 AGTATT 6mer2-7 dme-miR-8-3p 2L + 21231392 21231486 3'utr CG8677 FlyBase G4522.1 ATTTAACTTAGTTCCCTTTATGTGCTGTTACAGTTTAGCTAAATCAAGCATCAACTACTTTTAGTATTTTAATTTAGCTCTATATGATTTGAGCC 16 21231452 0.909646223 7 15 159 0.958333333 1.361727836 0 0.375 0.583333333 16 1 0 23 2L:21231392-21231486 6 6.5 457 FBgn0026577 1892.863333 25.80333333 39.86666667 0.003433951 0.251905439 0.163043478 2 2 2 0.1 dme-miR-305-3p 7mer-m8 ATGTGCC 2L 21257941 21257947 + 2L_21257941_21257947_+ 0.674511746 0.674512601 0.674512174 6.36E-07 Hr39 FBtr0081479|FBtr0081481 21257828|21257828 21259675|21259675 2L + 21257904 21257984 3'utr Hr39 FlyBase G5836.2 TTCTATAGATAAGATCCTTACTGTAAGTTCTGAAAACATGTGCCTAAAAACCAAAGCCACGATAGCAGTCACATCAGGCCC 21 21257942 0.906102357 8 19 101 0.913043478 1.322219295 0 0.095238095 0.173913043 21 2 0 21 2L:21257904-21257984 7 Hr39 FBtr0081480|FBtr0081481|FBtr0081479 21257828|21257828|21257828 21258196|21259675|21259675 ATGTGCC 7mer-m8 dme-miR-305-3p 2L + 21257914 21257972 3'utr Hr39 FlyBase G4533.1 AAGATCCTTACTGTAAGTTCTGAAAACATGTGCCTAAAAACCAAAGCCACGATAGCAGT 8 21257942 0.938136675 3 8 36 1 1.041392685 0 0.375 0.545454545 8 0 0 11 2L:21257914-21257972 7 10 458 FBgn0261239 651.04 19.10333333 29.40333333 0.015360039 0.523468854 0.340097495 -1 -1 -1 0.1 dme-miR-33-5p 8mer-A1 CAATGCAA 2L 21259641 21259648 + 2L_21259641_21259648_+ 0.624023132 0.605528717 0.614775924 0.013077516 Hr39 FBtr0081479|FBtr0081481 21257828|21257828 21259675|21259675 2L + 21259575 21259663 3'utr Hr39 FlyBase G5842.1 AAAACTCAATTTTGCTTTTAAATAAATTTAATAAGTAAAATTCAACAATAATTGATATACAATTGTCAATGCAATATTTTGTAATAAAA 13 21259640 0.991411029 3 13 135 1 1.146128036 0.142857143 0.076923077 0.142857143 13 0 0 14 2L:21259575-21259663 8 Hr39 FBtr0081481|FBtr0081479 21257828|21257828 21259675|21259675 CAATGCAA 8mer-A1 dme-miR-33-5p 2L + 21259624 21259664 3'utr Hr39 FlyBase G4537.1 AATTGATATACAATTGTCAATGCAATATTTTGTAATAAAAA 10 21259640 0.821326769 2 10 88 1 1.113943352 0 0.3 0.461538462 10 0 0 13 2L:21259624-21259664 8 10 459 FBgn0261239 651.04 19.10333333 29.40333333 0.015360039 0.523468854 0.340097495 1 1 1 0.1 dme-miR-965-3p 6mer3-8 TACGCT 2L 21281651 21281656 + 2L_21281651_21281656_+ 0.999719578 0.997032113 0.998375846 0.001900349 CG8671 FBtr0330680|FBtr0081484|FBtr0330678|FBtr0114602|FBtr0346464|FBtr0081483|FBtr0330679 21281513|21281513|21281513|21281513|21281513|21281513|21281513 21282037|21282037|21282514|21282037|21282790|21282037|21282514 2L + 21281411 21281713 stop_codon CG8671 FlyBase G5870.1 TGTACATCGCTCGCGATGGAACCGCCTCCCTGGGCGGACATGAGGTTAAATCAAGCGTACGAGCGGGCGCCCTAAAGCAGGTGGTAATGCAGGATAGAAGATAGTAGTATCCGAGACTCACAACTCCTTTTTAAAATTAATTAGAAGACTTATTGATCAATTAAAATGGAGTATTGAACTAAAAGAAATAGTTTAGGTAATACAAACATGTTTACTCTCAAACAAAAGTGAGAATGCAAATACGCTATATAAGAGTATATAAAATGTTTGTCGGAACTACACTGCTATGAATGTAATTAGCTA 143 21281651 0.967535235 30 141 772 0.989130435 1.959041392 0.10326087 0.258741259 0.423913043 143 1 1 182 2L:21281411-21281713 6 CG8671 FBtr0081483|FBtr0330679|FBtr0114602|FBtr0346464|FBtr0330678|FBtr0330680|FBtr0081484 21281513|21281513|21281513|21281513|21281513|21281513|21281513 21282037|21282514|21282037|21282790|21282514|21282037|21282037 TACGCT 6mer3-8 dme-miR-965-3p 2L + 21281613 21281673 3'utr CG8671 FlyBase G4561.2 CAAACATGTTTACTCTCAAACAAAAGTGAGAATGCAAATACGCTATATAAGAGTATATAAA 19 21281651 0.948675233 4 18 81 0.923076923 1.380211242 0 0.263157895 0.461538462 19 2 0 24 2L:21281613-21281673 6 32.5 460 FBgn0032938 1894.276667 62.21666667 95.35 0.017156945 0.522368069 0.340849502 0 0 0 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 2L 21286198 21286204 - 2L_21286198_21286204_- 0.782901553 0.782910232 0.782905892 6.08E-06 Mio FBtr0301461|FBtr0301459|FBtr0301457|FBtr0301460|FBtr0301464|FBtr0081524|FBtr0301458|FBtr0081525|FBtr0301462|FBtr0081527|FBtr0301463 21286076|21286076|21286079|21286076|21286076|21286076|21286076|21286076|21286076|21286076|21286076 21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291 2L - 21286182 21286236 3'utr Mio FlyBase G12195.2 AAATAATTTTTGCTAACTGCTCAGCACTAATTGTACAAAATGCCTGATGAGCATA 31 21286206 0.971763703 6 28 169 0.921052632 1.544068044 0.368421053 0.193548387 0.342105263 31 3 0 35 2L:21286182-21286236 7 Mio FBtr0081525|FBtr0301462|FBtr0081527|FBtr0301463|FBtr0081524|FBtr0301458|FBtr0301460|FBtr0301459|FBtr0301464|FBtr0301461|FBtr0301457 21286076|21286076|21286076|21286076|21286076|21286076|21286076|21286076|21286076|21286076|21286079 21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291 GTACAAA 7mer-A1 dme-miR-305-5p 2L - 21286179 21286215 3'utr Mio FlyBase G9342.1 CAGCACTAATTGTACAAAATGCCTGATGAGCATATTT 10 21286206 0.764914298 3 8 61 0.846153846 1.041392685 0.076923077 0.2 0.384615385 10 2 0 11 2L:21286179-21286215 7 19.5 461 FBgn0032940 1888.76 53.04 81.26333333 0.010324234 0.367647059 0.239960622 2 2 2 0.1 dme-miR-283-5p 6mer3-8 TGATAT 2L 21286267 21286272 - 2L_21286267_21286272_- 0.847287974 0.946380498 0.896834236 0.070068979 Mio FBtr0301461|FBtr0301459|FBtr0301457|FBtr0301460|FBtr0301464|FBtr0081524|FBtr0301458|FBtr0081525|FBtr0301462|FBtr0081527|FBtr0301463 21286076|21286076|21286079|21286076|21286076|21286076|21286076|21286076|21286076|21286076|21286076 21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291 2L - 21286257 21286322 stop_codon Mio FlyBase G12196.1 TGGCCAGCATCCAAATCTGCATGGACCCTAACCGTTGATGCTGATGTCCTTGATATGAATTTATTT 12 21286272 0.980147276 6 11 87 1 1.176091259 0.2 0.25 0.4 12 0 0 15 2L:21286257-21286322 6 Mio FBtr0081525|FBtr0301462|FBtr0081527|FBtr0301463|FBtr0081524|FBtr0301458|FBtr0301460|FBtr0301459|FBtr0301464|FBtr0301461|FBtr0301457 21286076|21286076|21286076|21286076|21286076|21286076|21286076|21286076|21286076|21286076|21286079 21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291 TGATAT 6mer3-8 dme-miR-283-5p 2L - 21286267 21286301 stop_codon Mio FlyBase G9343.1 TGGACCCTAACCGTTGATGCTGATGTCCTTGATAT 8 21286273 0.858599406 4 8 55 1 1 0.3 0.25 0.4 8 0 0 10 2L:21286267-21286301 5 6.5 462 FBgn0032940 1888.76 53.04 81.26333333 0.003441411 0.12254902 0.079986874 0 1 0.5 0.1 dme-miR-7-5p 7mer-A1 TCTTCCA 2L 21319125 21319131 + 2L_21319125_21319131_+ 0.785463564 0.712059982 0.748761773 0.051904183 crc FBtr0081512|FBtr0332001|FBtr0081513|FBtr0332002 21319056|21319056|21319056|21319056 21319527|21319527|21319527|21319527 2L + 21319086 21319133 3'utr crc FlyBase G5894.1 CGTCGTTTGCAAAGTTATTGTTATAGTTAAACCCAAGCCTCTTCCATA 7 21319103 0.930633238 4 6 58 0.888888889 0.602059991 0.222222222 0.285714286 0.444444444 7 0 1 8 2L:21319086-21319133 7 crc FBtr0081513|FBtr0332002|FBtr0081512|FBtr0332001 21319056|21319056|21319056|21319056 21319527|21319527|21319527|21319527 TCTTCCA 7mer-A1 dme-miR-7-5p 2L + 21319004 21319135 stop_codon crc FlyBase G4578.1 ATGCGCTATCTGCGCCAGCTGATTCGAGAGTTCTACCATGAACGCAAGCGCTAGGCTTTATTTTCTTTGAAATCAATTTTATCGTCGTTTGCAAAGTTATTGTTATAGTTAAACCCAAGCCTCTTCCATAAA 27 21319103 0.877541477 19 24 227 0.771428571 1.431363764 0.057142857 0.148148148 0.342857143 27 8 0 27 2L:21319004-21319135 7 3 463 FBgn0000370 8504.88 510.09 782.7766667 0.000352739 0.005881315 0.003832511 22 22 22 0.1 dme-miR-318-3p 6mer2-7 CCAGTG 2L 21319285 21319290 + 2L_21319285_21319290_+ 0.99998872 0.977059427 0.988524074 0.016213464 crc FBtr0081512|FBtr0332001|FBtr0081513|FBtr0332002 21319056|21319056|21319056|21319056 21319527|21319527|21319527|21319527 2L + 21319146 21319340 3'utr crc FlyBase G5895.1 TCATAATGTTTCAATGTAATACTATCAATAACAATCTCCGGGTTGCCCAAAATCTACAAATCACCAAAGTACGCAGCCTGTCCTTTGTCCTACATTTTTGGCACTAATGACGAGTCTCTGAATTCGGAAATATTTGTTGCCAGTGGGGCCTAAAGGCGACCCCATATCCCAAGCAGCACGGTCCAATGTAAAAAC 62 21319280 0.97814563 23 57 379 0.927536232 1.505149978 0.202898551 0.112903226 0.202898551 62 4 1 64 2L:21319146-21319340 6 crc FBtr0081513|FBtr0332002|FBtr0081512|FBtr0332001 21319056|21319056|21319056|21319056 21319527|21319527|21319527|21319527 CCAGTG 6mer2-7 dme-miR-318-3p 2L + 21319242 21319337 3'utr crc FlyBase G4580.1 TTTGGCACTAATGACGAGTCTCTGAATTCGGAAATATTTGTTGCCAGTGGGGCCTAAAGGCGACCCCATATCCCAAGCAGCACGGTCCAATGTAAA 24 21319279 0.901642514 10 22 140 0.875 1.544068044 0.175 0.416666667 0.65 24 5 0 35 2L:21319242-21319337 6 15 464 FBgn0000370 8504.88 510.09 782.7766667 0.001763693 0.029406575 0.019162554 5 6 5.5 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG 2L 21319398 21319403 + 2L_21319398_21319403_+ 0.815433964 0.999932806 0.907683385 0.130460353 crc FBtr0081512|FBtr0332001|FBtr0081513|FBtr0332002 21319056|21319056|21319056|21319056 21319527|21319527|21319527|21319527 2L + 21319380 21319416 3'utr crc FlyBase G5896.1 TCGGACAGTGTTGCGGCTGCTGTGCTATTTCAAAAAC 31 21319404 0.627898643 7 29 233 0.944444444 1.531478917 0.055555556 0.096774194 0.222222222 31 2 0 34 2L:21319380-21319416 6 crc FBtr0081513|FBtr0332002|FBtr0081512|FBtr0332001 21319056|21319056|21319056|21319056 21319527|21319527|21319527|21319527 GCTGTG 6mer2-7 dme-miR-1008-3p 2L + 21319347 21319416 3'utr crc FlyBase G4581.1 ATTGAAAAGCTCATTGATTTGTTTTTCTGCAAATCGGACAGTGTTGCGGCTGCTGTGCTATTTCAAAAAC 25 21319399 0.982878258 8 25 194 1 1.579783597 0.131578947 0.44 0.631578947 25 0 0 38 2L:21319347-21319416 6 27.5 465 FBgn0000370 8504.88 510.09 782.7766667 0.003233438 0.053912055 0.035131349 -6 -1 -3.5 0.1 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2L 21356913 21356918 + 2L_21356913_21356918_+ 0.972790869 0.999574643 0.986182756 0.018938936 Tsp39D FBtr0273404 21356804 21358271 2L + 21356898 21356965 3'utr Tsp39D FlyBase G5903.1 TATTTTACATGCCCATTGAAGGCTGATTATCTTATTTATAACTAGATATATTATATTAATTTAATTTA 68 21356914 0.811831203 14 63 602 0.933333333 1.367976785 0.026666667 0.102941176 0.186666667 68 3 2 70 2L:21356898-21356965 6 Tsp39D FBtr0273404 21356804 21358271 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2L + 21356856 21356940 3'utr Tsp39D FlyBase G4584.1 GCTTCACAAGAACTATTACAAAAATGAAATCACAAAATATTCTATTTTACATGCCCATTGAAGGCTGATTATCTTATTTATAACT 50 21356914 0.979807676 7 43 410 0.861111111 1.315270435 0.027777778 0.36 0.555555556 50 8 2 62 2L:21356856-21356940 6 52.5 466 FBgn0032943 321.6666667 16.54333333 25.32333333 0.163212435 3.17348378 2.073186784 -1 -1 -1 0.1 dme-miR-305-3p 6mer3-8 ATGTGC 2L 21357313 21357318 + 2L_21357313_21357318_+ 0.997075907 0.999999728 0.998537818 0.002067439 Tsp39D FBtr0273404 21356804 21358271 2L + 21357125 21357336 3'utr Tsp39D FlyBase G5905.1 TTTTAATGTTTGCTTGAATTTGTATGCCATATACAAATTTAAGTACGTTTTATTAAGGCTGTCACTTTGGTTCGATTTCCATTCATTCGTACTTCAATATTTCATATTATAATAAAGTGACCTTGTAGCGTTTATCTATGTACTACCTTTATTCACATAAAGAATGTTCGAAGGTATGTAGAGTGACGATGTGCATCTCTTTACAGTAAAAA 49 21357316 0.89632265 21 46 457 0.928571429 1.716003344 0.142857143 0.142857143 0.25 49 4 0 52 2L:21357125-21357336 6 Tsp39D FBtr0273404 21356804 21358271 ATGTGC 6mer3-8 dme-miR-305-3p 2L + 21357295 21357335 3'utr Tsp39D FlyBase G4587.1 AAGGTATGTAGAGTGACGATGTGCATCTCTTTACAGTAAAA 11 21357325 0.659094719 6 11 80 1 1.204119983 0.125 0.363636364 0.5625 11 0 0 16 2L:21357295-21357335 6 14 467 FBgn0032943 321.6666667 16.54333333 25.32333333 0.043523316 0.846262341 0.552849809 -3 -12 -7.5 0.1 dme-miR-14-3p 7mer-A1 AGACTGA 2L 21357475 21357481 + 2L_21357475_21357481_+ 0.806174373 0.773916338 0.790045355 0.022809921 Tsp39D FBtr0273404 21356804 21358271 2L + 21357452 21357489 3'utr Tsp39D FlyBase G5907.1 TTAAAACATTTCTTTAGAATTCGAGACTGAATGACATA 12 21357471 0.788036854 4 11 79 0.9375 1.176091259 0.3125 0.25 0.4375 12 1 0 15 2L:21357452-21357489 7 Tsp39D FBtr0273404 21356804 21358271 AGACTGA 7mer-A1 dme-miR-14-3p 2L + 21357462 21357487 3'utr Tsp39D FlyBase G4588.1 TCTTTAGAATTCGAGACTGAATGACA 5 21357465 0.634183922 3 4 30 1 1.079181246 0.333333333 0.6 0.833333333 5 0 0 12 2L:21357462-21357487 7 8.5 468 FBgn0032943 321.6666667 16.54333333 25.32333333 0.02642487 0.513802136 0.335658813 4 10 7 0.1 dme-bantam-3p 6mer3-8 TGATCT 2L 21357585 21357590 + 2L_21357585_21357590_+ 0.999998338 0.999994689 0.999996513 2.55E-06 Tsp39D FBtr0273404 21356804 21358271 2L + 21357555 21357606 3'utr Tsp39D FlyBase G5908.1 CGGAACCAAAACATTATCAAATAAAACTAATGATCTGTAAAAATATTTGTAT 24 21357585 0.962892583 4 24 125 1 1.505149978 0 0.25 0.4375 24 0 0 32 2L:21357555-21357606 6 Tsp39D FBtr0273404 21356804 21358271 TGATCT 6mer3-8 dme-bantam-3p 2L + 21357567 21357597 3'utr Tsp39D FlyBase G4589.1 ATTATCAAATAAAACTAATGATCTGTAAAAA 9 21357585 0.731309113 2 9 48 1 1 0 0.111111111 0.2 9 0 0 10 2L:21357567-21357597 6 16 469 FBgn0032943 321.6666667 16.54333333 25.32333333 0.049740933 0.967156962 0.631828353 0 0 0 0.1 dme-miR-282-5p 6mer2-7 GAGGCT 2L 21358089 21358094 + 2L_21358089_21358094_+ 0.998677511 0.999200491 0.998939001 0.000369817 Tsp39D FBtr0273404 21356804 21358271 2L + 21358030 21358108 3'utr Tsp39D FlyBase G5912.1 ATATACCTAAATATATCGAATTTACAATTTTCATATCGACTTATATGTAGATTAACTTCGAGGCTTTACAATAAAACAA 43 21358095 0.985229093 6 41 339 0.960784314 1.389166084 0.019607843 0.11627907 0.254901961 43 1 1 49 2L:21358030-21358108 6 Tsp39D FBtr0273404 21356804 21358271 GAGGCT 6mer2-7 dme-miR-282-5p 2L + 21358066 21358106 3'utr Tsp39D FlyBase G4590.1 CGACTTATATGTAGATTAACTTCGAGGCTTTACAATAAAAC 28 21358095 0.781068908 4 27 222 0.97826087 1.653212514 0 0.392857143 0.630434783 28 1 0 45 2L:21358066-21358106 6 35 470 FBgn0032943 321.6666667 16.54333333 25.32333333 0.10880829 2.115655853 1.382124523 -6 -6 -6 0.1 dme-miR-7-5p 7mer-A1 TCTTCCA 2L 2156563 2156569 - 2L_2156563_2156569_- 0.823344896 0.823342896 0.823343896 1.41E-06 aop FBtr0077850|FBtr0330658|FBtr0077851 2156482|2156482|2156482 2158164|2158164|2158164 2L - 2156518 2156786 3'utr aop FlyBase G6954.1 TTGAAGCACTTTATTAATTACATTAAACGGAATGAACAGAGTTAGGAGAAGATATCATCGCTGCACGTTCATACAATTAGCCTGTAGTGCAACTGTAATTATTAATTATTGTGTAGATCTACGCTAAAGTTAATTTTCTATTTGTTTTTCGTACGCCTTAAGTTTAAACACCGCCAATAGCTAATAATTAGCACTCTAGTGTCGCCACAATACCTGTTCTTCCATTGAAAACGTTATCTTTCGATCAATACATAATTTATATATGTATA 166 2156570 0.986510365 32 163 1204 0.984615385 1.982271233 0.179487179 0.138554217 0.266666667 166 2 1 192 2L:2156518-2156786 7 aop FBtr0077851|FBtr0330658|FBtr0077850 2156482|2156482|2156482 2158164|2158164|2158164 TCTTCCA 7mer-A1 dme-miR-7-5p 2L - 2156529 2156643 3'utr aop FlyBase G5437.1 GTTTTTCGTACGCCTTAAGTTTAAACACCGCCAATAGCTAATAATTAGCACTCTAGTGTCGCCACAATACCTGTTCTTCCATTGAAAACGTTATCTTTCGATCAATACATAATTT 76 2156570 0.776862656 17 76 540 1 2.033423755 0.12037037 0.368421053 0.555555556 76 0 0 108 2L:2156529-2156643 7 91 471 FBgn0000097 634.18 16.10666667 24.79666667 0.143492384 5.649834437 3.669848098 1 1 1 0.1 dme-miR-980-5p 8mer-A1 GAAAAACA 2L 2157057 2157064 - 2L_2157057_2157064_- 0.63781512 0.637884832 0.637849976 4.93E-05 aop FBtr0077850|FBtr0330658|FBtr0330659|FBtr0077851 2156482|2156482|2156790|2156482 2158164|2158164|2158164|2158164 2L - 2156970 2157134 5'utr aop FlyBase G6955.2 AAAGAGCTTTCAAAATTCAATTTCAATTGAGCCCCTAGCCCTAGATACACTGCAACAAGAAACACGGATAGAAAAACATTGGCTTCCATTTTAATATAGCAATGATGATACACACAAGCATATATGTATACACATTAGTTTTCTATTGCTCTTAATTTTATTTTT 110 2157056 0.983029803 15 107 858 0.976377953 2.093421685 0.165354331 0.127272727 0.244094488 110 3 0 124 2L:2156970-2157134 8 aop FBtr0330659|FBtr0077851|FBtr0330658|FBtr0077850 2156790|2156482|2156482|2156482 2158164|2158164|2158164|2158164 GAAAAACA 8mer-A1 dme-miR-980-5p 2L - 2156966 2157077 5'utr aop FlyBase G5440.1 AGAAACACGGATAGAAAAACATTGGCTTCCATTTTAATATAGCAATGATGATACACACAAGCATATATGTATACACATTAGTTTTCTATTGCTCTTAATTTTATTTTTATTA 76 2157056 0.985104175 11 75 616 0.990291262 2.008600172 0.281553398 0.289473684 0.475728155 76 1 0 102 2L:2156966-2157077 8 76.5 472 FBgn0000097 634.18 16.10666667 24.79666667 0.120628213 4.749586093 3.085092082 -8 -8 -8 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 2157269 2157275 - 2L_2157269_2157275_- 0.801827954 0.801897929 0.801862942 4.94E-05 aop FBtr0077850|FBtr0077850|FBtr0077850|FBtr0330658|FBtr0330658|FBtr0330658|FBtr0330659|FBtr0330659|FBtr0330659|FBtr0077851|FBtr0077851|FBtr0077851 2156482|2156482|2156482|2156482|2156482|2156482|2156790|2156790|2156790|2156482|2156482|2156482 2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164 2L - 2157214 2157287 5'utr aop FlyBase G6956.1 AAATTGATTTCGTGTGATAACAACAGAATTATCTTTGATTCACATTGGCTGAATGCTAACGAAACCAGAGCAGT 12 2157282 0.977306607 11 12 78 1 1.255272505 0.055555556 0.333333333 0.555555556 12 0 0 18 2L:2157214-2157287 7 aop FBtr0330659|FBtr0330659|FBtr0330659|FBtr0077851|FBtr0077851|FBtr0077851|FBtr0330658|FBtr0330658|FBtr0330658|FBtr0077850|FBtr0077850|FBtr0077850 2156790|2156790|2156790|2156482|2156482|2156482|2156482|2156482|2156482|2156482|2156482|2156482 2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 2157222 2157288 5'utr aop FlyBase G5442.1 CAAATTGATTTCGTGTGATAACAACAGAATTATCTTTGATTCACATTGGCTGAATGCTAACGAAACC 14 2157283 0.98809634 8 11 102 0.833333333 0.698970004 0.166666667 0.5 0.708333333 14 1 3 20 2L:2157222-2157288 7 10 473 FBgn0000097 634.18 16.10666667 24.79666667 0.015768394 0.620860927 0.403280011 7 8 7.5 0.1 dme-miR-305-3p 8mer-A1 ATGTGCCA 2L 2157603 2157610 - 2L_2157603_2157610_- 0.612099856 0.612705012 0.612402434 0.00042787 aop FBtr0077850|FBtr0330660|FBtr0330658|FBtr0330659|FBtr0077851 2156482|2157425|2156482|2156790|2156482 2158164|2158164|2158164|2158164|2158164 2L - 2157588 2157859 3'utr aop FlyBase G6958.1 AATTCAATTCTTGATCAAAGGCTTCTTCTAACCATTGCTGCTTTATACTTTCTTTGCGGCTGTCAAACGACCTTTCCGACTTTCTGTACATAGAAATCACATCTGCATAAACCAACAAACAATCATACATAAATACATTTATTTTATACATCAAGCGTATTTATTAAGCTAAGCTAAGCAAGAGCAGAGTGCATGTAATTTCGTTGTTGTAAGTAGATTTCTTGAGCCGGCGCAGCGCAGCCTTCGATTATGTGCCAATTTCTACATTTATC 54 2157611 0.985471234 31 49 409 0.869565217 1.477121255 0.202898551 0.148148148 0.333333333 54 8 1 60 2L:2157588-2157859 8 aop FBtr0330659|FBtr0077851|FBtr0330660|FBtr0330658|FBtr0077850 2156790|2156482|2157425|2156482|2156482 2158164|2158164|2158164|2158164|2158164 ATGTGCCA 8mer-A1 dme-miR-305-3p 2L - 2157584 2157694 3'utr aop FlyBase G5445.1 AAGCTAAGCTAAGCAAGAGCAGAGTGCATGTAATTTCGTTGTTGTAAGTAGATTTCTTGAGCCGGCGCAGCGCAGCCTTCGATTATGTGCCAATTTCTACATTTATCAAAC 32 2157637 0.965322325 13 30 157 0.976190476 1.311753861 0.166666667 0.28125 0.452380952 32 0 1 41 2L:2157584-2157694 8 9 474 FBgn0000097 634.18 16.10666667 24.79666667 0.014191554 0.558774834 0.36295201 1 27 14 0.1 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 2L 2158088 2158094 - 2L_2158088_2158094_- 0.8226568 0.82281433 0.822735565 0.000111369 aop FBtr0077850|FBtr0330660|FBtr0330658|FBtr0330659|FBtr0077851 2156482|2157425|2156482|2156790|2156482 2158164|2158164|2158164|2158164|2158164 2L - 2157949 2158132 3'utr aop FlyBase G6959.1 ACATCCATCTTCCACTCCCTCCTGAACACACACAACATTACCTGAGCTAAATAATGTGGGACCAGCACAACAAGCGCACAGACACATAGACAGACACTCTGCTGGATAAAATTCTGGATGCCTTTCGGTTAGGATGGGTCGCTTAGAATGCAATCGAAACGGAAAACTCATTATTGAAGATTGT 415 2158095 0.99054615 24 393 1572 0.943248532 1.382017043 0.113502935 0.180722892 0.334637965 415 10 19 482 2L:2157949-2158132 7 aop FBtr0330659|FBtr0077851|FBtr0330660|FBtr0330658|FBtr0077850 2156790|2156482|2157425|2156482|2156482 2158164|2158164|2158164|2158164|2158164 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2L - 2158020 2158213 stop_codon aop FlyBase G5448.1 TTGCAATGGCGGCGAGTCGGAGGACTCCTTCCGACACATGCAGCAGTAGGAGGAGAAGTGTCCTGAGACAATCACCGCACTACATCCATCTTCCACTCCCTCCTGAACACACACAACATTACCTGAGCTAAATAATGTGGGACCAGCACAACAAGCGCACAGACACATAGACAGACACTCTGCTGGATAAAATT 228 2158095 0.977614159 18 212 806 0.949295775 2.050508646 0.098591549 0.399122807 0.614084507 228 16 2 337 2L:2158020-2158213 7 182 475 FBgn0000097 634.18 16.10666667 24.79666667 0.286984768 11.29966887 7.339696196 1 1 1 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2L 21614804 21614809 - 2L_21614804_21614809_- 0.999654864 0.999768664 0.999711764 8.05E-05 CG2201 FBtr0305503|FBtr0085922|FBtr0085921|FBtr0345685|FBtr0085923 21614230|21614764|21614764|21614764|21614764 21614977|21614977|21614977|21614977|21614977 2L - 21614790 21614823 3'utr CG2201 FlyBase G12226.1 TCGAACTACTTTAAAAGACTATTAAAATTTGTAA 12 21614802 0.679622164 4 11 80 0.947368421 1.255272505 0.263157895 0.333333333 0.578947368 12 1 0 18 2L:21614790-21614823 6 CG2201 FBtr0085923|FBtr0085921|FBtr0345685|FBtr0305503|FBtr0085922 21614764|21614764|21614764|21614230|21614764 21614977|21614977|21614977|21614977|21614977 AAGACT 6mer3-8 dme-miR-14-3p 2L - 21614795 21614823 3'utr CG2201 FlyBase G9363.1 TCGAACTACTTTAAAAGACTATTAAAATT 11 21614802 0.703262973 3 9 73 0.833333333 0.698970004 0 0.090909091 0.166666667 11 1 1 10 2L:21614795-21614823 6 11.5 476 FBgn0032955 595.71 31.05 47.65333333 0.019304695 0.37037037 0.241326245 -7 -7 -7 0.1 dme-bantam-3p 6mer2-7 GATCTC 2L 21616746 21616751 - 2L_21616746_21616751_- 0.979952811 0.93002863 0.95499072 0.03530174 CG2201 FBtr0100511 21616669 21617273 2L - 21616737 21616771 3'utr CG2201 FlyBase G12232.1 CAGAATATACGTTTCAAAAAGATCTCTTTTCAAAA 10 21616745 0.878922512 4 10 80 1 1.204119983 0.0625 0.4 0.625 10 0 0 16 2L:21616737-21616771 6 CG2201 FBtr0100511 21616669 21617273 GATCTC 6mer2-7 dme-bantam-3p 2L - 21616738 21616763 3'utr CG2201 FlyBase G9368.1 ACGTTTCAAAAAGATCTCTTTTCAAA 7 21616745 0.673251725 2 7 55 1 0.903089987 0 0.142857143 0.25 7 0 0 8 2L:21616738-21616763 6 8.5 477 FBgn0032955 595.71 31.05 47.65333333 0.014268688 0.273752013 0.178371572 -6 -6 -6 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 21647061 21647066 + 2L_21647061_21647066_+ 0.999914254 0.999834757 0.999874506 5.62E-05 Ac3 FBtr0085897 21646824 21647964 2L + 21647045 21647071 3'utr Ac3 FlyBase G5932.1 TGCTTTTGTAAACTGTGTACCTAAAAC 12 21647060 0.753637546 3 11 85 0.933333333 0.84509804 0 0.25 0.4 12 0 1 14 2L:21647045-21647071 6 Ac3 FBtr0085897 21646824 21647964 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 21647037 21647072 3'utr Ac3 FlyBase G4605.1 AATAGATTTGCTTTTGTAAACTGTGTACCTAAAACA 9 21647060 0.917437236 2 9 56 1 1.146128036 0 0.444444444 0.642857143 9 0 0 14 2L:21647037-21647072 6 10 478 FBgn0023416 614.5733333 23.08666667 35.21333333 0.016271451 0.433150448 0.28398334 1 1 1 0.1 dme-miR-980-3p 7mer-A1 GCAGCTA 2L 21647196 21647202 + 2L_21647196_21647202_+ 0.823349444 0.823349381 0.823349412 0 Ac3 FBtr0085897 21646824 21647964 2L + 21647167 21647216 3'utr Ac3 FlyBase G5933.1 AGCTCTGTAATATTTAAGTGATTCGCTTTGCAGCTAATTGATGTGCAGAT 62 21647194 0.78478928 6 59 620 0.955882353 1.511883361 0.352941176 0.080645161 0.161764706 62 2 1 65 2L:21647167-21647216 7 Ac3 FBtr0085897 21646824 21647964 GCAGCTA 7mer-A1 dme-miR-980-3p 2L + 21647170 21647216 3'utr Ac3 FlyBase G4606.1 TCTGTAATATTTAAGTGATTCGCTTTGCAGCTAATTGATGTGCAGAT 41 21647193 0.796142289 5 41 432 1 1.755874856 0.333333333 0.268292683 0.473684211 41 0 0 57 2L:21647170-21647216 7 51.5 479 FBgn0023416 614.5733333 23.08666667 35.21333333 0.083797974 2.230724805 1.462514199 2 3 2.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2L 21664320 21664326 - 2L_21664320_21664326_- 0.82334956 0.823346028 0.823347794 2.55E-06 CG2225 FBtr0085917|FBtr0304885|FBtr0085915|FBtr0085914|FBtr0332967|FBtr0100618|FBtr0085918 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 2L - 21664178 21664371 3'utr CG2225 FlyBase G12241.1 GAAGTTGAGTGGTTGGAAAGGAAAATTGCAATATGTAAACGTTTACTAGTCATTAAATATAAAAAATGAACCATAAAAAATGTATAAGAAAGATAACATATTTTTTATTAACACTCAGTGGATGCCAAAAACATAAATATTGGAATCATTTTATCAGCGGGAGCTGTGGCACTCAAAAACAAGATAAAATTATT 108 21664328 0.983677919 21 99 767 0.9375 1.77815125 0.2578125 0.157407407 0.2890625 108 7 1 120 2L:21664178-21664371 7 CG2225 FBtr0100618|FBtr0085918|FBtr0085914|FBtr0332967|FBtr0304885|FBtr0085915|FBtr0085917 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 21664296 21664373 3'utr CG2225 FlyBase G9377.1 ATGAAGTTGAGTGGTTGGAAAGGAAAATTGCAATATGTAAACGTTTACTAGTCATTAAATATAAAAAATGAACCATAA 51 21664319 0.87925287 9 41 369 0.829268293 1.355387658 0.317073171 0.450980392 0.658536585 51 12 2 68 2L:21664296-21664373 7 59 480 FBgn0032957 1484.293333 32.49333333 50.1 0.039749555 1.815757078 1.177644711 2 -7 -2.5 0.1 dme-miR-304-5p 8mer-A1 TGAGATTA 2L 21664568 21664575 - 2L_21664568_21664575_- 0.625357303 0.625357668 0.625357485 2.83E-07 CG2225 FBtr0085917|FBtr0304885|FBtr0085915|FBtr0085914|FBtr0332967|FBtr0100618|FBtr0085918 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 2L - 21664480 21664599 3'utr CG2225 FlyBase G12242.1 GAGTGCAACACAGGAAAATCAAGTTGAGATTATAAAAAAATTCTTAAAACTGATACGTATAGAATTTCCAAAAACTGAAACAGAATGAAGTTAAACCCTCCACATTTTAACGAATGTTTG 39 21664576 0.968466409 6 39 217 1 1.643452676 0.090909091 0.128205128 0.227272727 39 0 0 44 2L:21664480-21664599 8 CG2225 FBtr0100618|FBtr0085918|FBtr0085914|FBtr0332967|FBtr0304885|FBtr0085915|FBtr0085917 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 TGAGATTA 8mer-A1 dme-miR-304-5p 2L - 21664530 21664589 3'utr CG2225 FlyBase G9378.1 CAGGAAAATCAAGTTGAGATTATAAAAAAATTCTTAAAACTGATACGTATAGAATTTCCA 33 21664576 0.791235382 5 33 180 1 1.69019608 0.142857143 0.363636364 0.571428571 33 0 0 49 2L:21664530-21664589 8 31 481 FBgn0032957 1484.293333 32.49333333 50.1 0.02088536 0.954041855 0.618762475 1 1 1 0.1 dme-miR-14-3p 8mer-A1 AAGACTGA 2L 21665191 21665198 - 2L_21665191_21665198_- 0.643565282 0.643565455 0.643565368 1.41E-07 CG2225 FBtr0085917|FBtr0304885|FBtr0085915|FBtr0085914|FBtr0332967|FBtr0100618|FBtr0085918 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 2L - 21665183 21665242 3'utr CG2225 FlyBase G12245.1 GAAGACAATTGGAAAATTCAAATGCACAAAAGCCGTGAATCGTAAAGACTGACAATGAAA 21 21665200 0.940429867 3 20 79 0.958333333 1.361727836 0.375 0.142857143 0.25 21 1 0 23 2L:21665183-21665242 8 CG2225 FBtr0100618|FBtr0085918|FBtr0085914|FBtr0332967|FBtr0304885|FBtr0085915|FBtr0085917 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 AAGACTGA 8mer-A1 dme-miR-14-3p 2L - 21665179 21665223 3'utr CG2225 FlyBase G9381.1 AAATGCACAAAAGCCGTGAATCGTAAAGACTGACAATGAAAAAAA 12 21665200 0.943823986 4 11 40 0.85 1.230448921 0.35 0.333333333 0.6 12 3 0 17 2L:21665179-21665223 8 14.5 482 FBgn0032957 1484.293333 32.49333333 50.1 0.009768959 0.446245384 0.289421158 2 2 2 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC 2L 21665290 21665296 - 2L_21665290_21665296_- 0.66156034 0.661615528 0.661587934 3.90E-05 CG2225 FBtr0085917|FBtr0304885|FBtr0085915|FBtr0085914|FBtr0332967|FBtr0100618|FBtr0085918 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 2L - 21665274 21665347 3'utr CG2225 FlyBase G12246.1 ATCTTTGCACTCACCTAGTCACTCACCTGCTCATTCGATCAGCAAAGCGCTTGTGTTCGTTCGCCTTGAAAAAA 34 21665297 0.894278006 8 32 241 0.951219512 1.290034611 0.146341463 0.176470588 0.317073171 34 1 1 39 2L:21665274-21665347 7 CG2225 FBtr0100618|FBtr0085918|FBtr0085914|FBtr0332967|FBtr0304885|FBtr0085915|FBtr0085917 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 TGTGTTC 7mer-m8 dme-miR-317-3p 2L - 21665270 21665381 3'utr CG2225 FlyBase G9382.1 CATTAACTTCTATCGGGTCGAAACCTGCCAGTTCATCTTTGCACTCACCTAGTCACTCACCTGCTCATTCGATCAGCAAAGCGCTTGTGTTCGTTCGCCTTGAAAAAATACA 23 21665297 0.983318551 10 23 167 1 1.51851394 0.121212121 0.260869565 0.484848485 23 0 0 33 2L:21665270-21665381 7 22 483 FBgn0032957 1484.293333 32.49333333 50.1 0.014821868 0.677061961 0.439121756 1 1 1 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 21678058 21678063 - 2L_21678058_21678063_- 0.999998664 0.999435266 0.999716965 0.000398384 EF2 FBtr0332966 21677911 21678310 2L - 21678049 21678079 3'utr EF2 FlyBase G12261.1 AAATCAGAGCGCCGCTATGTGACTGACACGA 6 21678061 0.579204898 3 5 21 0.833333333 0.698970004 0.166666667 0 0 6 1 0 5 2L:21678049-21678079 6 EF2 FBtr0332966 21677911 21678310 ATGTGA 6mer3-8 dme-miR-1003-3p 2L - 21678050 21678084 3'utr EF2 FlyBase G9388.1 TACATAAATCAGAGCGCCGCTATGTGACTGACACG 14 21678062 0.905374703 2 14 45 1 1.414973348 0.115384615 0.5 0.730769231 14 0 0 26 2L:21678050-21678084 6 10 484 FBgn0000559 36020.00333 1557.58 2372.66 0.000277624 0.006420216 0.004214679 -2 -1 -1.5 0.1 dme-miR-79-3p 6mer3-8 TAGCTT 2L 21728586 21728591 + 2L_21728586_21728591_+ 1 1 1 0 CG31619 FBtr0085901|FBtr0339131|FBtr0110959|FBtr0339132|FBtr0307497|FBtr0301000 21728172|21728122|21728172|21728172|21728172|21728172 21729051|21729051|21729051|21729051|21729051|21729051 2L + 21728554 21728605 3'utr CG31619 FlyBase G5974.1 TGACATCCATTGTCGGTTCATAGCACTGAAATTAGCTTCGATTACCACTTAG 29 21728574 0.71678821 5 28 215 0.970588235 1.217483944 0.147058824 0.137931034 0.264705882 29 0 1 33 2L:21728554-21728605 6 CG31619 FBtr0339132|FBtr0110959|FBtr0339131|FBtr0085901|FBtr0301000|FBtr0307497 21728172|21728172|21728122|21728172|21728172|21728172 21729051|21729051|21729051|21729051|21729051|21729051 TAGCTT 6mer3-8 dme-miR-79-3p 2L + 21728562 21728601 3'utr CG31619 FlyBase G4638.1 ATTGTCGGTTCATAGCACTGAAATTAGCTTCGATTACCAC 13 21728586 0.72101481 6 12 83 0.944444444 1.230448921 0.055555556 0.307692308 0.5 13 1 0 17 2L:21728562-21728601 6 16.5 485 FBgn0051619 2354.866667 61.1 93.72666667 0.007006766 0.2700491 0.176043815 12 0 6 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 2L 21729007 21729013 + 2L_21729007_21729013_+ 0.775645805 0.777223399 0.776434602 0.001115532 CG31619 FBtr0085901|FBtr0339131|FBtr0110959|FBtr0339132|FBtr0307497|FBtr0301000 21728172|21728122|21728172|21728172|21728172|21728172 21729051|21729051|21729051|21729051|21729051|21729051 2L + 21728991 21729019 3'utr CG31619 FlyBase G5977.1 AAATTTGAGATGCATTGTACAAAAATTGG 12 21729005 0.712881828 2 11 64 1 1.113943352 0.307692308 0.083333333 0.153846154 12 0 0 13 2L:21728991-21729019 7 CG31619 FBtr0339132|FBtr0110959|FBtr0339131|FBtr0085901|FBtr0301000|FBtr0307497 21728172|21728172|21728122|21728172|21728172|21728172 21729051|21729051|21729051|21729051|21729051|21729051 GTACAAA 7mer-A1 dme-miR-305-5p 2L + 21728989 21729022 3'utr CG31619 FlyBase G4640.1 ACAAATTTGAGATGCATTGTACAAAAATTGGAAC 7 21729005 0.971409473 3 5 36 0.8 0.903089987 0.2 0.428571429 0.6 7 2 0 8 2L:21728989-21729022 7 8.5 486 FBgn0051619 2354.866667 61.1 93.72666667 0.003609546 0.139116203 0.090689238 2 2 2 0.1 dme-miR-34-5p 6mer3-8 CACTGC 2L 21740337 21740342 - 2L_21740337_21740342_- 0.701256884 0.932128343 0.816692614 0.163250733 step FBtr0332471 21740039 21741582 2L - 21740316 21740384 3'utr step FlyBase G12275.1 AATTGCAATATTATAAATACTTTAGTTTGATTTGTACATATACACTGCTGTGCACTATCCATTTCGTAT 8 21740338 0.979079289 6 8 66 1 1.113943352 0.153846154 0.5 0.692307692 8 0 0 13 2L:21740316-21740384 6 step FBtr0332471 21740039 21741582 CACTGC 6mer3-8 dme-miR-34-5p 2L - 21740322 21740363 3'utr step FlyBase G9402.1 TTAGTTTGATTTGTACATATACACTGCTGTGCACTATCCATT 7 21740338 0.741299185 5 7 56 1 1.041392685 0.090909091 0.428571429 0.636363636 7 0 0 11 2L:21740322-21740363 6 5.5 487 FBgn0086779 2401.73 84.77 129.5966667 0.002290016 0.064881444 0.042439363 -4 -4 -4 0.1 dme-miR-14-3p 7mer-A1 AGACTGA 2L 21740514 21740520 - 2L_21740514_21740520_- 0.78408536 0.788677662 0.786381511 0.003247246 step FBtr0332471 21740039 21741582 2L - 21740505 21740702 3'utr step FlyBase G12276.2 AAGAATGTATAAATTGCCCGTTGATGTGTAAGCAAAAAACTATAAGTCAAAAAATCATCAAACAAGAACTCTGTTGCCAGCACTGATTTTATAGTAGCCTAAAGATGCTATTAGAAAATAGTTATAGTAAATTGTGTGTCGTGGCGCTGTGATATCATTGATAGGAAAGAGCTTCTGTGTTGAGACTGAAAAAACATT 859 21740523 0.81204467 35 833 5454 0.968335036 2.374748346 0.233912155 0.124563446 0.231869254 859 28 3 948 2L:21740505-21740702 7 step FBtr0332471 21740039 21741582 AGACTGA 7mer-A1 dme-miR-14-3p 2L - 21740505 21740649 3'utr step FlyBase G9404.1 ATCATCAAACAAGAACTCTGTTGCCAGCACTGATTTTATAGTAGCCTAAAGATGCTATTAGAAAATAGTTATAGTAAATTGTGTGTCGTGGCGCTGTGATATCATTGATAGGAAAGAGCTTCTGTGTTGAGACTGAAAAAACATT 500 21740523 0.732976311 24 482 3131 0.966942149 2.147367108 0.252066116 0.34 0.545454545 500 20 4 702 2L:21740505-21740649 7 610 488 FBgn0086779 2401.73 84.77 129.5966667 0.253983587 7.195941961 4.706911186 3 3 3 0.1 dme-miR-1006-3p 6mer2-7 GAATTT 2L 21740913 21740918 - 2L_21740913_21740918_- 0.99653494 0.996006239 0.996270589 0.000373847 step FBtr0332471 21740039 21741582 2L - 21740825 21740971 3'utr step FlyBase G12277.1 TTAATAAATGCAATTCTTAAATTAGTTTAGACGGCAAATTATGTTCTTTCTGAGAATTTGGACTACGTGACATAGTTTTTATTGAACCAAAGATCGAATTTAAACTATTATTACTATCAATACCAACTTTCACCACAATACACACTT 731 21740913 0.985530995 25 717 5952 0.976640712 2.244524512 0.071190211 0.191518468 0.342602892 731 17 4 878 2L:21740825-21740971 6 step FBtr0332471 21740039 21741582 GAATTT 6mer2-7 dme-miR-1006-3p 2L - 21740831 21740953 3'utr step FlyBase G9406.1 AAATTAGTTTAGACGGCAAATTATGTTCTTTCTGAGAATTTGGACTACGTGACATAGTTTTTATTGAACCAAAGATCGAATTTAAACTATTATTACTATCAATACCAACTTTCACCACAATAC 485 21740913 0.793076961 25 476 3743 0.987359551 2.36983407 0.077247191 0.364948454 0.56741573 485 7 2 703 2L:21740831-21740953 6 563 489 FBgn0086779 2401.73 84.77 129.5966667 0.23441436 6.641500531 4.344247537 -5 -5 -5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2L 21836980 21836985 + 2L_21836980_21836985_+ 0.999950617 0.999951058 0.999950837 3.54E-07 tsh FBtr0085906|FBtr0085906|FBtr0085906 21836181|21836181|21836181 21837011|21837011|21837011 2L + 21836939 21837002 3'utr tsh FlyBase G6008.1 CATGCCAAGGCGAAAAGATATAAAATTGGATAAGAAAACATTGTGATCAAATACAAGATAAAAG 249 21836979 0.954628108 5 238 1092 0.96039604 1.50965048 0.00660066 0.176706827 0.323432343 249 4 8 291 2L:21836939-21837002 6 tsh FBtr0085906|FBtr0085906|FBtr0085906 21836181|21836181|21836181 21837011|21837011|21837011 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 21836938 21837002 3'utr tsh FlyBase G4666.1 ACATGCCAAGGCGAAAAGATATAAAATTGGATAAGAAAACATTGTGATCAAATACAAGATAAAAG 224 21836979 0.955795549 5 213 992 0.952095808 1.461034435 0.005988024 0.361607143 0.571856287 224 6 10 318 2L:21836938-21837002 6 234 490 FBgn0003866 1100.013333 28.07333333 43.04 0.212724694 8.335312277 5.436802974 1 1 1 0.1 dme-miR-190-5p 8mer-A1 ACATATCA 2L 2210047 2210054 - 2L_2210047_2210054_- 0.612812844 0.6128173 0.612815072 3.18E-06 CG15385 FBtr0077845|FBtr0331649 2209572|2209944 2210248|2210248 2L - 2210020 2210070 3'utr CG15385 FlyBase G6989.1 ACAAATCGAAAACGATACATATCAATGGAGCACTTGTTAGACTATAAGAAC 25 2210055 0.948275306 5 20 120 0.8125 1.414973348 0.15625 0.24 0.40625 25 6 0 26 2L:2210020-2210070 8 CG15385 FBtr0331649|FBtr0077845 2209944|2209572 2210248|2210248 ACATATCA 8mer-A1 dme-miR-190-5p 2L - 2210037 2210069 3'utr CG15385 FlyBase G5475.1 CAAATCGAAAACGATACATATCAATGGAGCACT 8 2210055 0.857112441 2 8 30 1 1.146128036 0.214285714 0.625 0.785714286 8 0 0 14 2L:2210037-2210069 8 15.5 491 FBgn0031397 4.333333333 0.213333333 0.323333333 3.576923077 72.65625 47.93814433 1 1 1 0.1 dme-miR-2535b-3p 6mer3-8 CCGTGA 2L 22125077 22125082 + 2L_22125077_22125082_+ 0.992850236 0.993706936 0.993278586 0.000605778 CG3651 FBtr0331655|FBtr0331656|FBtr0331657 22124938|22124938|22124938 22125151|22125120|22126614 2L + 22125048 22125096 3'utr CG3651 FlyBase G6025.2 CTTCCATATTAAATCAGGTGATCGCATGGCCGTGACCCACCGCTTAAGT 194 22125074 0.884127704 9 193 704 0.99543379 2.338456494 0.155251142 0.097938144 0.200913242 194 1 0 218 2L:22125048-22125096 6 CG3651 FBtr0331657|FBtr0331655|FBtr0331656 22124938|22124938|22124938 22126614|22125151|22125120 CCGTGA 6mer3-8 dme-miR-2535b-3p 2L + 22125024 22125092 3'utr CG3651 FlyBase G4688.1 GTTTAATTTTTTTTAATAAGTCATCTTCCATATTAAATCAGGTGATCGCATGGCCGTGACCCACCGCTT 136 22125074 0.929743114 7 136 498 1 2.328379603 0.159624413 0.441176471 0.643192488 136 0 0 213 2L:22125024-22125092 6 163 492 FBgn0032974 1358.31 57.56666667 88.28333333 0.120002061 2.83149971 1.84632811 3 3 3 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG 2L 22125633 22125638 + 2L_22125633_22125638_+ 0.906140118 0.705230535 0.805685327 0.142064541 CG3651 FBtr0331657 22124938 22126614 2L + 22125606 22125664 3'utr CG3651 FlyBase G6026.1 AGTGCTTAAACTTTTCTCATAAGGCTGGCTGTGTTCTGCACGTCGTTCAAGGGCCGTGA 46 22125629 0.898311189 6 44 432 0.964285714 1.431363764 0.375 0.152173913 0.303571429 46 1 1 54 2L:22125606-22125664 6 CG3651 FBtr0331657 22124938 22126614 GCTGTG 6mer2-7 dme-miR-1008-3p 2L + 22125589 22125652 3'utr CG3651 FlyBase G4689.1 TTAACGACTGCAATCCAAGTGCTTAAACTTTTCTCATAAGGCTGGCTGTGTTCTGCACGTCGTT 24 22125631 0.988125073 8 23 207 0.90625 0.860338007 0.40625 0.208333333 0.40625 24 0 3 29 2L:22125589-22125652 6 33.5 493 FBgn0032974 1358.31 57.56666667 88.28333333 0.024663 0.58193399 0.379460072 4 2 3 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 2L 2212809 2212814 - 2L_2212809_2212814_- 0.989271714 1 0.994635857 0.007586054 Uch FBtr0303459|FBtr0077844|FBtr0330676 2212736|2212736|2212736 2212969|2212969|2212969 2L - 2212758 2212862 3'utr Uch FlyBase G6991.1 CCGCCTTTCAGCCGGTCAATAGTTTACGCATATTTATTCCGCATTGAGCCAAAGCCGCATATGTATTGGGAACACCATGATTGTTATTAAAGAGTGCACTCTAGC 19 2212785 0.976178799 12 18 119 0.95 1.278753601 0.2 0.052631579 0.1 19 1 0 19 2L:2212758-2212862 6 Uch FBtr0330676|FBtr0303459|FBtr0077844 2212736|2212736|2212736 2212969|2212969|2212969 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 2212763 2212826 3'utr Uch FlyBase G5477.1 TTCCGCATTGAGCCAAAGCCGCATATGTATTGGGAACACCATGATTGTTATTAAAGAGTGCACT 8 2212803 0.978270569 3 6 49 0.705882353 0.602059991 0.470588235 0.75 0.882352941 8 3 2 12 2L:2212763-2212826 6 6 494 FBgn0010288 838 99.6 152.0966667 0.007159905 0.060240964 0.039448596 -29 -11 -20 0.1 dme-miR-1012-3p 7mer-A1 TGACTAA 2L 22128505 22128511 - 2L_22128505_22128511_- 0.823309241 0.823349562 0.823329402 2.86E-05 CycK FBtr0085941|FBtr0085942|FBtr0344022 22128262|22128262|22124283 22128520|22128520|22128520 2L - 22128493 22128653 stop_codon CycK FlyBase G12315.1 GGGAGTCCAGCAGACAGTGGTCGGACACTATAGCGGGAGCGCTGCACCACCACCACCAATGCCGCCTAGCTTGCCTCCAGGAGCCAGTGGATACTACAACGCCGGTGGGCGTCCATCGCAGCAGCGCTACTAGTAGATGCAATGACTAATAAACAAGTAAA 26 22128516 0.94457109 11 25 102 1 1.505149978 0.375 0.115384615 0.28125 26 0 0 32 2L:22128493-22128653 7 CycK FBtr0085941|FBtr0085942|FBtr0344022 22128262|22128262|22124283 22128520|22128520|22128520 TGACTAA 7mer-A1 dme-miR-1012-3p 2L - 22128489 22128538 stop_codon CycK FlyBase G9437.1 TCGCAGCAGCGCTACTAGTAGATGCAATGACTAATAAACAAGTAAAAAAA 14 22128516 0.916662662 4 14 63 1 1.230448921 0.235294118 0.214285714 0.352941176 14 0 0 17 2L:22128489-22128538 7 15 495 FBgn0025674 1467.203333 91.78 140.27 0.010223532 0.163434299 0.106936622 5 5 5 0.1 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 2L 22158795 22158800 + 2L_22158795_22158800_+ 0.999991615 0.997474666 0.998733141 0.001779717 CG42748 FBtr0333745|FBtr0303274|FBtr0303272|FBtr0333742|FBtr0303273|FBtr0303271 22157031|22158743|22158743|22158743|22156833|22158743 22159611|22161348|22159611|22159611|22159611|22159611 2L + 22158754 22158811 5'utr CG42748 FlyBase G6049.1 AGAGTAGAAATACTGGTAACCGGCAGTTTATGCTTTTTGTTTGGTGCACGGCATTTTT 8 22158795 0.991179188 3 6 69 0.888888889 0.903089987 0.111111111 0.125 0.222222222 8 1 0 8 2L:22158754-22158811 6 CG42748 FBtr0303274|FBtr0333745|FBtr0303271|FBtr0303273|FBtr0333742|FBtr0303272 22158743|22157031|22158743|22156833|22158743|22158743 22161348|22159611|22159611|22159611|22159611|22159611 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 2L + 22158783 22158828 5'utr CG42748 FlyBase G4706.1 ATGCTTTTTGTTTGGTGCACGGCATTTTTGTAGCCTATCTGCAAAC 7 22158811 0.970251608 5 7 64 1 1.176091259 0.2 0.571428571 0.8 7 0 0 15 2L:22158783-22158828 6 5 496 FBgn0261802 1164 24.91333333 38.18666667 0.004295533 0.200695745 0.130935754 0 -16 -8 0.1 dme-miR-184-5p 6mer2-7 GATAAG 2L 22166277 22166282 - 2L_22166277_22166282_- 0.999979117 0.999876772 0.999927944 7.23E-05 Clamp FBtr0100407|FBtr0085964 22165718|22165964 22166551|22166551 2L - 22166226 22166411 3'utr Clamp FlyBase G12338.1 ATATATCACCACAATGATATTAAAGAATAGAAAACGATGTTCCATCGTTAACACTTCAGCTGCATATGTCCTTTCTCCACTTTCATGTGGGATCTTCAAAAATGGGCGAAACCCAAAAACGCTTTTTACGATAAGCATACAAATGAACCTAATTTATTTGATAGCTTGTATAATATACTTAAACAT 207 22166286 0.931790669 28 198 1369 0.948207171 1.899455702 0.131474104 0.178743961 0.322709163 207 11 2 238 2L:22166226-22166411 6 Clamp FBtr0085964|FBtr0100407 22165964|22165718 22166551|22166551 GATAAG 6mer2-7 dme-miR-184-5p 2L - 22166244 22166370 3'utr Clamp FlyBase G9452.2 CCATCGTTAACACTTCAGCTGCATATGTCCTTTCTCCACTTTCATGTGGGATCTTCAAAAATGGGCGAAACCCAAAAACGCTTTTTACGATAAGCATACAAATGAACCTAATTTATTTGATAGCTTG 123 22166286 0.915477747 22 115 751 0.968421053 1.963787827 0.121052632 0.422764228 0.626315789 123 5 1 184 2L:22166244-22166370 6 48 497 FBgn0032979 2178.656667 96.29333333 147.5566667 0.022031925 0.498476876 0.325298755 4 4 4 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 22166522 22166528 - 2L_22166522_22166528_- 0.565329314 0.656455796 0.610892555 0.064436166 Clamp FBtr0100407|FBtr0085964 22165718|22165964 22166551|22166551 2L - 22166476 22166668 stop_codon Clamp FlyBase G12340.1 AAGTACGGCCAAACTGCTCCTCGCCAGACCAGCAGCGATGGGATGATAGTGCATAAGCAGGAGATTCCTGACATGGAGGATGAGGCCCAACAGGAAGTGATTATCGGTGGGTTATAGATAGTTTAAATGCAGAGGTGACAGGCAGCTTAATGAAGTCACAGACACTGGAGTCCACCCTGCTTAGCTTCAGTTT 47 22166521 0.934894167 19 45 176 0.967213115 1.469822016 0.180327869 0.234042553 0.409836066 47 1 1 59 2L:22166476-22166668 7 Clamp FBtr0085964|FBtr0100407 22165964|22165718 22166551|22166551 GGCAGCT 7mer-m8 dme-miR-980-3p 2L - 22166493 22166639 stop_codon Clamp FlyBase G9454.1 CAGCAGCGATGGGATGATAGTGCATAAGCAGGAGATTCCTGACATGGAGGATGAGGCCCAACAGGAAGTGATTATCGGTGGGTTATAGATAGTTTAAATGCAGAGGTGACAGGCAGCTTAATGAAGTCACAGACACTGGAGTCCACC 41 22166521 0.95141308 17 40 175 0.966666667 1.763427994 0.3 0.365853659 0.566666667 41 2 0 58 2L:22166493-22166639 7 16.5 498 FBgn0032979 2178.656667 96.29333333 147.5566667 0.007573474 0.171351426 0.111821447 -7 -7 -7 0.1 dme-miR-278-3p 6mer3-8 CCCACC 2L 2220423 2220428 + 2L_2220423_2220428_+ 0.805375243 0.999990081 0.902682662 0.137613516 mio FBtr0077835 2220409 2220625 2L + 2220394 2220454 stop_codon mio FlyBase G1197.1 TGAGAGACATTTCCTAGCTGTCCGGAGCACCCACCATACACAGCCCTTACTCGCCCAGGCC 6 2220442 0.932306984 5 6 22 1 0.77815125 0.166666667 0 0 6 0 0 6 2L:2220394-2220454 6 mio FBtr0077835 2220409 2220625 CCCACC 6mer3-8 dme-miR-278-3p 2L + 2220406 2220454 stop_codon mio FlyBase G937.1 CCTAGCTGTCCGGAGCACCCACCATACACAGCCCTTACTCGCCCAGGCC 8 2220441 0.789471339 6 8 22 1 0.954242509 0 0.125 0.222222222 8 0 0 9 2L:2220406-2220454 6 3.5 499 FBgn0031399 136 5.556666667 8.516666667 0.025735294 0.629874025 0.410958904 -19 -18 -18.5 0.1 dme-miR-252-5p 8mer-m1 GTACTTAG 2L 2220526 2220533 + 2L_2220526_2220533_+ 0.636787596 0.636788485 0.636788041 6.36E-07 mio FBtr0077835 2220409 2220625 2L + 2220463 2220553 3'utr mio FlyBase G1198.1 ATGCATTAAGTTGTTGATTTGTTCCAAACGCGTGCGCCTTAAACAAACTCAGAAGTGTTCATTGTACTTAGACAAGGGATGTGCCCGTAGC 29 2220524 0.757774811 7 26 191 0.948717949 1.267171728 0.153846154 0.172413793 0.384615385 29 1 1 37 2L:2220463-2220553 8 mio FBtr0077835 2220409 2220625 GTACTTAG 8mer-m1 dme-miR-252-5p 2L + 2220478 2220550 3'utr mio FlyBase G938.1 GATTTGTTCCAAACGCGTGCGCCTTAAACAAACTCAGAAGTGTTCATTGTACTTAGACAAGGGATGTGCCCGT 16 2220525 0.979047126 6 15 100 0.956521739 1.342422681 0.347826087 0.3125 0.52173913 16 1 0 22 2L:2220478-2220550 8 18.5 500 FBgn0031399 136 5.556666667 8.516666667 0.136029412 3.329334133 2.17221135 2 1 1.5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2L 2225589 2225594 - 2L_2225589_2225594_- 0.788415935 0.557898483 0.673157209 0.163000417 CG15387 FBtr0113015 2225543 2225797 2L - 2225546 2225607 3'utr CG15387 FlyBase G6997.1 TCTGAAACAGGCCACCAAAATAGACTTAAGCTTGATATTCTTATAAAATGCATTTCTTTTGA 25 2225587 0.972255682 5 25 101 1 1.491361694 0.193548387 0.2 0.35483871 25 0 0 31 2L:2225546-2225607 6 CG15387 FBtr0113015 2225543 2225797 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 2225557 2225601 3'utr CG15387 FlyBase G5482.1 ACAGGCCACCAAAATAGACTTAAGCTTGATATTCTTATAAAATGC 12 2225587 0.96883937 2 10 46 0.894736842 1.230448921 0 0.416666667 0.631578947 12 2 0 17 2L:2225557-2225601 6 15.5 501 FBgn0031403 487 91.37333333 139.89 0.031827515 0.169633737 0.110801344 -7 -7 -7 0.1 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 2230248 2230254 + 2L_2230248_2230254_+ 0.807543694 0.806170889 0.806857291 0.000970716 sau FBtr0100673|FBtr0077840 2230125|2230125 2231099|2231088 2L + 2230223 2230279 3'utr sau FlyBase G1218.2 TTGCTGCTTTTGTTTTAGAAACTTTGCTGTGAGTGGAACCGAATCGGGCGATAGGAT 393 2230246 0.736067226 8 377 2570 0.972457627 1.883661435 0.527542373 0.152671756 0.294491525 393 8 5 459 2L:2230223-2230279 7 sau FBtr0100674|FBtr0077840|FBtr0100673 2230125|2230125|2230125 2230413|2231088|2231099 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L + 2230188 2230299 3'utr sau FlyBase G953.1 AACACAGAAATACAGACCCACATCTGGAATACATTTTGCTGCTTTTGTTTTAGAAACTTTGCTGTGAGTGGAACCGAATCGGGCGATAGGATTTTCTTAAATGGCAACCACC 288 2230246 0.974789341 16 282 1886 0.967667436 1.844062773 0.51039261 0.361111111 0.575057737 288 9 5 419 2L:2230188-2230299 7 328 502 FBgn0267378 3863.503333 238.82 367.2833333 0.084897041 1.373419312 0.893043518 2 2 2 0.1 dme-miR-184-5p 6mer3-8 TGATAA 2L 2230630 2230635 + 2L_2230630_2230635_+ 1 0.999999897 0.999999948 7.07E-08 sau FBtr0100673|FBtr0077840 2230125|2230125 2231099|2231088 2L + 2230620 2230661 3'utr sau FlyBase G1219.1 AAGAAAACTTTGATAAAGTCTGGGCAAGCTGCGTGCGATTGT 8 2230633 0.949137054 3 8 44 1 0.903089987 0.125 0 0 8 0 0 8 2L:2230620-2230661 6 sau FBtr0077840|FBtr0100673 2230125|2230125 2231088|2231099 TGATAA 6mer3-8 dme-miR-184-5p 2L + 2230621 2230649 3'utr sau FlyBase G955.1 AGAAAACTTTGATAAAGTCTGGGCAAGCT 5 2230632 0.724736941 2 3 25 0.666666667 0.77815125 0.333333333 0.4 0.666666667 5 3 0 6 2L:2230621-2230649 6 5.5 503 FBgn0267378 3863.503333 238.82 367.2833333 0.001423578 0.023029897 0.014974815 -3 -2 -2.5 0.1 dme-miR-1003-3p 7mer-A1 TGTGAGA 2L 2231425 2231431 - 2L_2231425_2231431_- 0.823349562 0.823349186 0.823349374 2.83E-07 Sec24CD FBtr0329964 2231104 2232047 2L - 2231394 2231434 3'utr Sec24CD FlyBase G7001.1 TCGTGTGAGAATTACTCGACTTATATGGTATATTGCCCCTT 5 2231411 0.976544323 3 4 42 1 0.84509804 0.142857143 0.2 0.428571429 5 0 0 7 2L:2231394-2231434 7 Sec24CD FBtr0329964 2231104 2232047 TGTGAGA 7mer-A1 dme-miR-1003-3p 2L - 2231393 2231429 3'utr Sec24CD FlyBase G5488.1 TGAGAATTACTCGACTTATATGGTATATTGCCCCTTC 5 2231412 0.975355028 4 5 38 1 1 0.2 0.6 0.8 5 0 0 10 2L:2231393-2231429 5 3 504 FBgn0262126 1107.336667 30.21333333 46.15333333 0.002709203 0.09929391 0.065000722 -20 -19 -19.5 0.1 dme-miR-1008-3p 6mer3-8 AGCTGT 2L 2231884 2231889 - 2L_2231884_2231889_- 0.999732776 0.999999722 0.999866249 0.000188727 Sec24CD FBtr0329964|FBtr0077810 2231104|2231776 2232047|2232047 2L - 2231861 2232023 5'utr Sec24CD FlyBase G7002.1 AAGCCCGAGCAGCGATGGGCGGACAGTTATTCCCAAAACAGGGCTCGGATGCGTCGTCTGTCGTCCATGCGCAGTCGCCTCGGAAAATAAGAAATGCAAAGGGTTTAGGATCAGAAGCAGAAACTGGCGCTGAAAGCTGTTGGAACTTCAATTATATTTACAT 30 2231919 0.964289039 12 28 144 0.921052632 1.544068044 0.184210526 0.166666667 0.342105263 30 3 0 35 2L:2231861-2232023 6 Sec24CD FBtr0077810|FBtr0329964 2231776|2231104 2232047|2232047 AGCTGT 6mer3-8 dme-miR-1008-3p 2L - 2231851 2231974 5'utr Sec24CD FlyBase G5490.1 TGCGTCGTCTGTCGTCCATGCGCAGTCGCCTCGGAAAATAAGAAATGCAAAGGGTTTAGGATCAGAAGCAGAAACTGGCGCTGAAAGCTGTTGGAACTTCAATTATATTTACATCAAAATACAT 21 2231919 0.965847527 12 20 109 0.961538462 1.397940009 0.153846154 0.238095238 0.384615385 21 1 0 25 2L:2231851-2231974 6 10 505 FBgn0262126 1107.336667 30.21333333 46.15333333 0.009030677 0.3309797 0.216669074 30 30 30 0.1 dme-miR-263a-5p 6mer3-8 GTGCCA 2L 22368702 22368707 + 2L_22368702_22368707_+ 0.999955009 0.999999956 0.999977482 3.18E-05 CG17018 FBtr0085956|FBtr0306235|FBtr0306236|FBtr0085957|FBtr0085958 22368442|22368442|22368442|22368442|22368442 22368776|22368796|22368776|22368776|22368776 2L + 22368628 22368757 3'utr CG17018 FlyBase G6130.1 ATATAAATGTTTTATAATGTCGAAGTATTGATTGTAAAGAAAATCAGGGATAGCAACTGGATCGGCCGTACTCAGTGCCAAAAGTTCTTACAAATCCACAAAATGTGTCGAATATATCTCTTTAAGGTCC 47 22368703 0.998130145 12 44 241 0.962962963 1.716003344 0.166666667 0.14893617 0.259259259 47 2 0 52 2L:22368628-22368757 6 CG17018 FBtr0085956|FBtr0085958|FBtr0085957|FBtr0306236|FBtr0306235 22368442|22368442|22368442|22368442|22368442 22368776|22368776|22368776|22368776|22368796 GTGCCA 6mer3-8 dme-miR-263a-5p 2L + 22368639 22368716 3'utr CG17018 FlyBase G4776.1 TTATAATGTCGAAGTATTGATTGTAAAGAAAATCAGGGATAGCAACTGGATCGGCCGTACTCAGTGCCAAAAGTTCTT 31 22368703 0.938385762 5 30 132 1 1.643452676 0.159090909 0.35483871 0.545454545 31 0 0 44 2L:22368639-22368716 6 26.5 506 FBgn0039972 1088.566667 27.93333333 43.30333333 0.024343939 0.948687351 0.611962128 -1 -1 -1 0.1 dme-bantam-3p 7mer-m8 TGATCTC 2L 22533675 22533681 - 2L_22533675_22533681_- 0.661412221 0.657131179 0.6592717 0.003027124 RpL5 FBtr0344793 22532277 22534868 2L - 22533592 22533705 3'utr RpL5 FlyBase G12384.1 ATCTAAACCTCTAATCGTGCAAACTGATCTCTTTCTGTACTATAAAGTTTAATTTTAATTTTGCGTAGCTAGAGATAGTTTTCGTTGAGCTGATGATCTCCTTTCTGTGCTAGA 43 22533673 0.817529416 13 41 376 0.958333333 1.662757832 0.375 0.11627907 0.208333333 43 2 0 46 2L:22533592-22533705 7 RpL5 FBtr0344793 22532277 22534868 TGATCTC 7mer-m8 dme-bantam-3p 2L - 22533591 22533693 3'utr RpL5 FlyBase G9489.1 AATCGTGCAAACTGATCTCTTTCTGTACTATAAAGTTTAATTTTAATTTTGCGTAGCTAGAGATAGTTTTCGTTGAGCTGATGATCTCCTTTCTGTGCTAGAT 34 22533674 0.988880417 14 32 301 0.941176471 1.681241237 0.352941176 0.294117647 0.529411765 34 3 0 48 2L:22533591-22533693 7 23 507 FBgn0064225 23918.45333 2812.8 4275.716667 0.000961601 0.008176906 0.005379215 -8 -7 -7.5 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 22534570 22534577 - 2L_22534570_22534577_- 0.498417589 0.498343063 0.498380326 5.27E-05 RpL5 FBtr0344793|FBtr0332633 22532277|22533915 22534868|22534868 2L - 22534553 22534596 3'utr RpL5 FlyBase G12386.1 TGGTAAGATGGGAACTTGTGTACTTAATTCGGTTTCGGCCGCAG 33 22534578 0.740691695 6 31 310 0.972972973 1.556302501 0.432432432 0.121212121 0.216216216 33 1 0 36 2L:22534553-22534596 8 RpL5 FBtr0344793|FBtr0332633 22532277|22533915 22534868|22534868 GTACTTAA 8mer-A1 dme-miR-252-5p 2L - 22534525 22534596 3'utr RpL5 FlyBase G9490.1 TGGTAAGATGGGAACTTGTGTACTTAATTCGGTTTCGGCCGCAGTGGAACACTATTTCATCAATTCACTGCT 22 22534578 0.988479049 5 22 205 1 1.544068044 0.285714286 0.318181818 0.571428571 22 0 0 35 2L:22534525-22534596 8 26 508 FBgn0064225 23918.45333 2812.8 4275.716667 0.001087027 0.009243458 0.006080852 1 1 1 0.1 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2L 22540756 22540761 + 2L_22540756_22540761_+ 0.684327108 0.924719375 0.804523241 0.169983025 CG17490 FBtr0332629|FBtr0111259 22540487|22540487 22541293|22540900 2L + 22540727 22540762 5'utr CG17490 FlyBase G6140.1 CATCCCATCAGAACTATGCTATGTGATTTTTGAAGT 11 22540755 0.590841456 6 10 103 0.923076923 1.079181246 0.384615385 0.181818182 0.307692308 11 1 0 12 2L:22540727-22540762 6 CG17490 FBtr0111259|FBtr0332629 22540487|22540487 22540900|22541293 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2L + 22540732 22540809 5'utr CG17490 FlyBase G4785.1 CATCAGAACTATGCTATGTGATTTTTGAAGTAATAGCGCAAACATTGTTGTTGTCTGGACTTTAGATGATAAATCAAT 13 22540754 0.778974794 6 13 117 1 1.361727836 0.130434783 0.615384615 0.782608696 13 0 0 23 2L:22540732-22540809 6 9.5 509 FBgn0040009 384.5033333 18.73666667 28.78 0.024707198 0.507027219 0.330090341 1 2 1.5 0.1 dme-miR-1002-5p 6mer3-8 CTACTT 2L 22551445 22551450 + 2L_22551445_22551450_+ 0.49385972 0.490712147 0.492285933 0.002225689 CG17493 FBtr0332631|FBtr0332632|FBtr0332630 22551106|22551106|22551106 22551662|22556295|22551785 2L + 22551401 22551473 3'utr CG17493 FlyBase G6151.1 GGGAACTAATTATTGGTATATGTTACTTGAATTAGGTCACAACGCTACTTTTTACAGCTTATTGTCTAAATCT 22 22551452 0.953891445 7 21 194 0.892857143 0.795880017 0.142857143 0.181818182 0.357142857 22 0 3 25 2L:22551401-22551473 6 CG17493 FBtr0332630|FBtr0332632|FBtr0332631 22551106|22551106|22551106 22551785|22556295|22551662 CTACTT 6mer3-8 dme-miR-1002-5p 2L + 22551433 22551465 3'utr CG17493 FlyBase G4797.1 TAGGTCACAACGCTACTTTTTACAGCTTATTGT 7 22551452 0.956821511 2 7 43 1 1 0.3 0.428571429 0.6 7 0 0 10 2L:22551433-22551465 6 11 510 FBgn0040010 2105.436667 147.0866667 226.3066667 0.005224569 0.074785841 0.04860661 -7 -7 -7 0.1 dme-bantam-3p 6mer2-7 GATCTC 2L 22849162 22849167 + 2L_22849162_22849167_+ 0.999174434 0.999730894 0.999452664 0.000393505 CG17715 FBtr0111244|FBtr0111248 22849099|22849099 22850310|22850310 2L + 22849138 22849185 3'utr CG17715 FlyBase G6179.1 TATTACAGCAGCCGGACCATCATCGATCTCTTGTCGCAATGAAGGTAT 36 22849168 0.649552912 4 36 222 1 1.633468456 0.186046512 0.166666667 0.302325581 36 0 0 43 2L:22849138-22849185 6 CG17715 FBtr0111248|FBtr0111244 22849099|22849099 22850310|22850310 GATCTC 6mer2-7 dme-bantam-3p 2L + 22849141 22849187 3'utr CG17715 FlyBase G4821.1 TACAGCAGCCGGACCATCATCGATCTCTTGTCGCAATGAAGGTATCA 27 22849168 0.974960663 4 27 172 1 1.602059991 0.1 0.333333333 0.55 27 0 0 40 2L:22849141-22849187 6 31 511 FBgn0041004 1535.806667 93.98666667 143.51 0.020184832 0.329834019 0.216012821 -6 -6 -6 0.1 dme-miR-999-3p 7mer-A1 GTTAACA 2L 22849976 22849982 + 2L_22849976_22849982_+ 0.823224715 0.822929868 0.823077292 0.000208455 CG17715 FBtr0306550|FBtr0111245|FBtr0111246|FBtr0111244|FBtr0111248|FBtr0111247|FBtr0111249 22849802|22849802|22849802|22849099|22849099|22849802|22849802 22850310|22850310|22850310|22850310|22850310|22854208|22853034 2L + 22849915 22850003 3'utr CG17715 FlyBase G6181.1 AATTTGAATATGTATCAAATGTTTGTTAGGCAACTTAAAAAACGTACCAAAAGTATCTGAGGTTAACATATGCTCATCGGCGGTAATTT 17 22849972 0.957168219 8 17 109 1 1.342422681 0.136363636 0.294117647 0.454545455 17 0 0 22 2L:22849915-22850003 7 CG17715 FBtr0111246|FBtr0111245|FBtr0306550|FBtr0111249|FBtr0111247|FBtr0111248|FBtr0111244 22849802|22849802|22849802|22849802|22849802|22849099|22849099 22850310|22850310|22850310|22853034|22854208|22850310|22850310 GTTAACA 7mer-A1 dme-miR-999-3p 2L + 22849948 22849998 3'utr CG17715 FlyBase G4822.1 CTTAAAAAACGTACCAAAAGTATCTGAGGTTAACATATGCTCATCGGCGGT 18 22849972 0.963339674 3 17 92 1 1.397940009 0.2 0.333333333 0.52 18 0 0 25 2L:22849948-22849998 7 15 512 FBgn0041004 1535.806667 93.98666667 143.51 0.009766854 0.159597106 0.104522333 4 4 4 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 22992234 22992240 + 2L_22992234_22992240_+ 0.725914001 0.66042156 0.693167781 0.04631012 cta FBtr0111126|FBtr0111126|FBtr0111126|FBtr0334157|FBtr0334157|FBtr0334157 22991942|22991942|22991942|22991942|22991942|22991942 22992343|22992343|22992343|22992951|22992951|22992951 2L + 22992147 22992259 3'utr cta FlyBase G6222.1 ATATAATGATAAAAACCGAGACTACAGCATTTTAATATGCATATAGACTTATTTAAACCCATCGGCAAACTTAGTTATCGTGGTATTTGTGATATAATAATATTAATAACAAC 289 22992232 0.906334045 23 265 3111 0.928774929 1.399274248 0.017094017 0.173010381 0.319088319 289 13 12 326 2L:22992147-22992259 7 cta FBtr0111126|FBtr0111126|FBtr0111126|FBtr0334157|FBtr0334157|FBtr0334157 22991942|22991942|22991942|22991942|22991942|22991942 22992343|22992343|22992343|22992951|22992951|22992951 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 22992146 22992260 3'utr cta FlyBase G4850.2 TATATAATGATAAAAACCGAGACTACAGCATTTTAATATGCATATAGACTTATTTAAACCCATCGGCAAACTTAGTTATCGTGGTATTTGTGATATAATAATATTAATAACAACT 203 22992232 0.770985657 24 187 2111 0.93015873 1.352924268 0.015873016 0.403940887 0.615873016 203 10 12 293 2L:22992146-22992260 7 196.5 513 FBgn0000384 1592.86 81.62333333 124.9 0.123363007 2.407399845 1.573258607 2 2 2 0.1 dme-miR-1003-3p 8mer-A1 ATGTGAGA 2L 22992406 22992413 + 2L_22992406_22992413_+ 0.638886858 0.629947636 0.634417247 0.00632104 cta FBtr0334157 22991942 22992951 2L + 22992380 22992456 3'utr cta FlyBase G6224.1 CGTTTTGAAAAGCCATTAACCAATTTATGTGAGATTTTAAAAGCAGCTGAAATATTTTTAAATGGTCGTTAAAAGTA 48 22992404 0.827311584 10 43 400 0.870967742 1.73239376 0.064516129 0.229166667 0.403225806 48 8 0 54 2L:22992380-22992456 8 cta FBtr0334157 22991942 22992951 ATGTGAGA 8mer-A1 dme-miR-1003-3p 2L + 22992365 22992456 3'utr cta FlyBase G4851.1 TTTTGCGTGCATCTTCGTTTTGAAAAGCCATTAACCAATTTATGTGAGATTTTAAAAGCAGCTGAAATATTTTTAAATGGTCGTTAAAAGTA 41 22992404 0.988034305 15 38 348 0.901639344 1.740362689 0.098360656 0.390243902 0.590163934 41 6 0 55 2L:22992365-22992456 8 37 514 FBgn0000384 1592.86 81.62333333 124.9 0.023228658 0.453301752 0.29623699 2 2 2 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG 2L 22992592 22992597 + 2L_22992592_22992597_+ 0.999276212 0.999375249 0.99932573 7.00E-05 cta FBtr0334157 22991942 22992951 2L + 22992559 22992629 3'utr cta FlyBase G6226.1 CGTAGGCGTTTTCGTTTTAAGAAGCTAATCACCGCTGTGCGTCAAATTTAAAAAGCAGCAGACACTTTTTT 46 22992594 0.972239392 3 46 275 1 1.707570176 0.058823529 0.108695652 0.196078431 46 0 0 51 2L:22992559-22992629 6 cta FBtr0334157 22991942 22992951 GCTGTG 6mer2-7 dme-miR-1008-3p 2L + 22992561 22992613 3'utr cta FlyBase G4852.1 TAGGCGTTTTCGTTTTAAGAAGCTAATCACCGCTGTGCGTCAAATTTAAAAAG 35 22992594 0.972851584 3 34 208 1 1.643452676 0.022727273 0.228571429 0.386363636 35 0 0 44 2L:22992561-22992613 6 38.5 515 FBgn0000384 1592.86 81.62333333 124.9 0.02417036 0.47167885 0.308246597 -2 -2 -2 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 22992669 22992674 + 2L_22992669_22992674_+ 0.999999999 0.999999854 0.999999927 7.07E-08 cta FBtr0334157 22991942 22992951 2L + 22992652 22992719 3'utr cta FlyBase G6227.1 CGACTTCTAATGGAATGATGTGACTGTATACCACACTTTAAAACGGATTTAAAATAAATTAAAAAATT 18 22992670 0.970685795 8 18 116 1 1.342422681 0.045454545 0.222222222 0.363636364 18 0 0 22 2L:22992652-22992719 6 cta FBtr0334157 22991942 22992951 ATGTGA 6mer3-8 dme-miR-1003-3p 2L + 22992649 22992684 3'utr cta FlyBase G4853.1 TATCGACTTCTAATGGAATGATGTGACTGTATACCA 7 22992670 0.967233462 3 7 43 1 1.176091259 0 0.428571429 0.733333333 7 0 0 15 2L:22992649-22992684 6 11 516 FBgn0000384 1592.86 81.62333333 124.9 0.006905817 0.134765386 0.088070456 -1 -1 -1 0.1 dme-miR-1006-3p 7mer-A1 GAATTTA 2L 22992850 22992856 + 2L_22992850_22992856_+ 0.699405217 0.69960899 0.699507103 0.000144108 cta FBtr0334157 22991942 22992951 2L + 22992822 22992862 3'utr cta FlyBase G6228.1 ATATCATGTGCAACACAGAAAATACACGGAATTTATACCTA 12 22992844 0.947224235 3 11 52 0.923076923 1.079181246 0.076923077 0.083333333 0.153846154 12 1 0 12 2L:22992822-22992862 7 cta FBtr0334157 22991942 22992951 GAATTTA 7mer-A1 dme-miR-1006-3p 2L + 22992828 22992871 3'utr cta FlyBase G4854.1 TGTGCAACACAGAAAATACACGGAATTTATACCTACTAAGAATG 11 22992844 0.978373613 3 10 51 1 1.176091259 0.2 0.272727273 0.466666667 11 0 0 15 2L:22992828-22992871 7 11 517 FBgn0000384 1592.86 81.62333333 124.9 0.006905817 0.134765386 0.088070456 6 6 6 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2L 23161222 23161228 - 2L_23161222_23161228_- 0.671796082 0.671669058 0.67173257 8.98E-05 CG12567 FBtr0300704|FBtr0113705|FBtr0300703|FBtr0300702|FBtr0344847|FBtr0113704 23161120|23161120|23161120|23161120|23161120|23161120 23161957|23162856|23162903|23161957|23161957|23161957 2L - 23161167 23161246 3'utr CG12567 FlyBase G12434.1 CTTTTAATATATGTAGTAACCAAAGTGCTCAAAATTAAGAGATACATTATAGGTAGGATAATGTTACTTATGTACATTTT 14 23161221 0.985153247 7 14 110 1 1.176091259 0 0.071428571 0.133333333 14 0 0 15 2L:23161167-23161246 7 CG12567 FBtr0300702|FBtr0300703|FBtr0113705|FBtr0300704|FBtr0113704|FBtr0344847 23161120|23161120|23161120|23161120|23161120|23161120 23161957|23162903|23162856|23161957|23161957|23161957 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 23161206 23161238 3'utr CG12567 FlyBase G9526.1 ATATGTAGTAACCAAAGTGCTCAAAATTAAGAG 5 23161220 0.744184911 4 5 19 1 0.698970004 0 0 0 5 0 0 5 2L:23161206-23161238 7 7 518 FBgn0039958 1066.65 65.05666667 99.82333333 0.006562603 0.107598504 0.070123886 -7 -8 -7.5 0.1 dme-miR-1008-3p 8mer-A1 AGCTGTGA 2L 23161633 23161640 - 2L_23161633_23161640_- 0.638300071 0.642625528 0.640462799 0.00305852 CG12567 FBtr0300704|FBtr0113705|FBtr0300703|FBtr0300702|FBtr0344847|FBtr0113704 23161120|23161120|23161120|23161120|23161120|23161120 23161957|23162856|23162903|23161957|23161957|23161957 2L - 23161532 23161677 3'utr CG12567 FlyBase G12436.2 AATTATCAAATATCACTTCATTGTGTAGTCTACTAACAGCTGTGAAGAGTTTGTAATGCACTTAGAATTTTAAAAGTAGTGTTGAGCTGGTTTGTATTTGAATAATGAACAAAATAATGACAAATTCTAAAATTCTGCTAAAAAAT 70 23161646 0.92462623 24 63 495 0.905882353 1.284430734 0.294117647 0.185714286 0.329411765 70 5 3 77 2L:23161532-23161677 8 CG12567 FBtr0300702|FBtr0300703|FBtr0113705|FBtr0300704|FBtr0113704|FBtr0344847 23161120|23161120|23161120|23161120|23161120|23161120 23161957|23162903|23162856|23161957|23161957|23161957 AGCTGTGA 8mer-A1 dme-miR-1008-3p 2L - 23161619 23161723 3'utr CG12567 FlyBase G9529.3 TTTTATTTCACAATATCGGTCAGCATTAAGAAGTAAAATTATTACAAATTATCAAATATCACTTCATTGTGTAGTCTACTAACAGCTGTGAAGAGTTTGTAATGC 70 23161646 0.865760245 14 65 399 0.948717949 1.568201724 0.162393162 0.471428571 0.683760684 70 4 2 111 2L:23161619-23161723 8 41.5 519 FBgn0039958 1066.65 65.05666667 99.82333333 0.038906858 0.637905416 0.415734464 6 6 6 0.1 dme-miR-31a-5p 8mer-A1 TCTTGCCA 2L 23162033 23162040 - 2L_23162033_23162040_- 0.631135091 0.631133027 0.631134059 1.48E-06 CG12567 FBtr0113705|FBtr0300703 23161120|23161120 23162856|23162903 2L - 23161998 23162083 3'utr CG12567 FlyBase G12439.1 ACGTACAAGACACGCTTTGAGCAATCCATAAAACAACCTCAATTCTTGCCAGGTGATTCCAAAAACTGTAACTGTGCAATATTTCA 48 23162041 0.79079679 7 46 260 0.981481481 1.423245874 0.018518519 0.083333333 0.185185185 48 0 1 53 2L:23161998-23162083 8 CG12567 FBtr0300703|FBtr0113705 23161120|23161120 23162903|23162856 TCTTGCCA 8mer-A1 dme-miR-31a-5p 2L - 23162000 23162082 3'utr CG12567 FlyBase G9531.1 CGTACAAGACACGCTTTGAGCAATCCATAAAACAACCTCAATTCTTGCCAGGTGATTCCAAAAACTGTAACTGTGCAATATTT 40 23162041 0.968761512 5 39 216 1 1.799340549 0.031746032 0.375 0.603174603 40 0 0 63 2L:23162000-23162082 8 38 520 FBgn0039958 1066.65 65.05666667 99.82333333 0.035625557 0.584106164 0.380672521 1 1 1 0.1 dme-miR-305-3p 6mer2-7 TGTGCC 2L 23162361 23162366 - 2L_23162361_23162366_- 0.969685092 0.98799791 0.978841501 0.012949105 CG12567 FBtr0113705|FBtr0300703 23161120|23161120 23162856|23162903 2L - 23162315 23162434 5'utr CG12567 FlyBase G12442.1 TTTGAAAGCCGACAAGGACTTTTTCCCAATACCGAATATGTTTTCGACTTAGAGCTACCACTTGACTTTGTGCCTCAAAACGCTGACGGGGAGGTCCAGGCCTTTGAGCTGCTAACAGCC 60 23162366 0.840406626 14 59 416 0.987012987 1.880813592 0.116883117 0.233333333 0.402597403 60 1 0 76 2L:23162315-23162434 6 CG12567 FBtr0300703|FBtr0113705 23161120|23161120 23162903|23162856 TGTGCC 6mer2-7 dme-miR-305-3p 2L - 23162323 23162393 5'utr CG12567 FlyBase G9532.1 TTTCGACTTAGAGCTACCACTTGACTTTGTGCCTCAAAACGCTGACGGGGAGGTCCAGGCCTTTGAGCTGC 27 23162366 0.980996732 6 27 193 1 1.653212514 0.155555556 0.333333333 0.6 27 0 0 45 2L:23162323-23162393 6 34.5 521 FBgn0039958 1066.65 65.05666667 99.82333333 0.032344255 0.530306912 0.345610579 0 0 0 0.1 dme-miR-184-5p 6mer3-8 TGATAA 2L 2360349 2360354 - 2L_2360349_2360354_- 0.999841598 0.999883479 0.999862538 2.96E-05 Rab5 FBtr0330670|FBtr0077797|FBtr0077793|FBtr0077796|FBtr0330668|FBtr0077794|FBtr0077798|FBtr0077795|FBtr0330669 2359564|2359140|2359564|2359140|2359564|2359564|2359564|2359564|2359564 2360468|2360468|2360468|2360468|2360468|2360468|2360468|2360468|2360468 2L - 2360332 2360395 intron-3'utr Rab5 FlyBase G7031.1 AGAAAATGAAATTTCCAACGAGAGATTTGAAAAGTTTATGCTGATAATTATAAATAAAAAAATT 69 2360358 0.705093441 9 67 590 0.974683544 1.886490725 0.17721519 0.101449275 0.215189873 69 2 0 77 2L:2360332-2360395 6 Rab5 FBtr0330668|FBtr0077794|FBtr0077795|FBtr0077798|FBtr0330669|FBtr0330670|FBtr0077797|FBtr0077793|FBtr0077796 2359564|2359564|2359564|2359564|2359564|2359564|2359140|2359564|2359140 2360468|2360468|2360468|2360468|2360468|2360468|2360468|2360468|2360468 TGATAA 6mer3-8 dme-miR-184-5p 2L - 2360335 2360389 3'utr Rab5 FlyBase G5515.1 TGAAATTTCCAACGAGAGATTTGAAAAGTTTATGCTGATAATTATAAATAAAAAA 49 2360358 0.702205175 9 43 416 0.894736842 1.531478917 0.223684211 0.408163265 0.618421053 49 7 1 68 2L:2360335-2360389 6 53 522 FBgn0014010 2481.693333 154.6633333 236.7366667 0.021356386 0.342679799 0.223877445 4 4 4 0.1 dme-miR-276a-3p 6mer3-8 AGTTCC 2L 2369659 2369664 + 2L_2369659_2369664_+ 0.999999711 0.999994169 0.99999694 3.89E-06 Axud1 FBtr0077762|FBtr0330666|FBtr0330665|FBtr0077763 2368980|2368980|2368980|2368980 2370137|2370137|2370137|2370137 2L + 2369542 2369682 3'utr Axud1 FlyBase G1229.1 AATCGGACTCAAGTCGCCTTGTATAAATCATTTTATTGTTAAATTCGAGTTAGTCTCTAAGTACATACTGTAGTTTAGTTACTTTGTTGCTTAAGTTAAGTTCACTTCGCAAAATCAAGTTCCCTTCCTACTCAACTTTAA 20 2369661 0.990769375 10 16 170 0.833333333 1 0.041666667 0.15 0.291666667 20 3 1 20 2L:2369542-2369682 6 Axud1 FBtr0077763|FBtr0330665|FBtr0330666|FBtr0077762 2368980|2368980|2368980|2368980 2370137|2370137|2370137|2370137 AGTTCC 6mer3-8 dme-miR-276a-3p 2L + 2369630 2369676 3'utr Axud1 FlyBase G962.1 GCTTAAGTTAAGTTCACTTCGCAAAATCAAGTTCCCTTCCTACTCAA 6 2369661 0.969950406 3 6 36 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 2L:2369630-2369676 6 8 523 FBgn0261647 491.4533333 14.28 22 0.01627825 0.56022409 0.363636364 -2 -2 -2 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2L 2422637 2422642 + 2L_2422637_2422642_+ 0.947536252 0.702551232 0.825043742 0.173230625 CG9886 FBtr0077770|FBtr0077770|FBtr0077770|FBtr0335462|FBtr0335462|FBtr0335462 2422414|2422414|2422414|2422414|2422414|2422414 2422910|2422910|2422910|2424647|2424647|2424647 2L + 2422622 2422648 3'utr CG9886 FlyBase G1241.1 AAATTCAAATAATTTTGTGATCTTTAT 5 2422635 0.798768526 4 5 49 1 0.698970004 0 0 0 5 0 0 5 2L:2422622-2422648 6 CG9886 FBtr0077770|FBtr0077770|FBtr0077770|FBtr0335462|FBtr0335462|FBtr0335462 2422414|2422414|2422414|2422414|2422414|2422414 2422910|2422910|2422910|2424647|2424647|2424647 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 2422626 2422656 3'utr CG9886 FlyBase G971.1 TCAAATAATTTTGTGATCTTTATGCTCTGAG 5 2422636 0.685291148 3 4 49 0.857142857 0.77815125 0.857142857 0.4 0.571428571 5 1 0 6 2L:2422626-2422656 6 4.5 524 FBgn0031428 49.66666667 2.643333333 4.073333333 0.090604027 1.702395965 1.104746318 2 1 1.5 0.1 dme-miR-79-3p 7mer-m8 TAGCTTT 2L 2422688 2422694 + 2L_2422688_2422694_+ 0.620203012 0.620203895 0.620203453 6.36E-07 CG9886 FBtr0077770|FBtr0335462 2422414|2422414 2422910|2424647 2L + 2422668 2422706 3'utr CG9886 FlyBase G1242.1 TGACAGCATAAAACGGCAATTAGCTTTCGTCTCCGGTTA 6 2422687 0.980892215 2 6 46 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 2L:2422668-2422706 7 CG9886 FBtr0077770|FBtr0335462 2422414|2422414 2422910|2424647 TAGCTTT 7mer-m8 dme-miR-79-3p 2L + 2422677 2422702 3'utr CG9886 FlyBase G972.1 AAAACGGCAATTAGCTTTCGTCTCCG 5 2422687 0.943960656 2 5 30 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 2L:2422677-2422702 7 5.5 525 FBgn0031428 49.66666667 2.643333333 4.073333333 0.110738255 2.080706179 1.350245499 1 1 1 0.1 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 2497415 2497422 + 2L_2497415_2497422_+ 0.624828391 0.62491518 0.624871785 6.14E-05 oaf FBtr0077777|FBtr0077780|FBtr0077778 2496696|2497161|2496696 2498846|2498846|2498454 2L + 2497304 2497462 3'utr oaf FlyBase G1249.1 TATACTACAGCAAAAAAGGAGTAAAACGAAATAAATGTAAAAAAGTGCTTCTGTATACTATGTATATATATGTATATTTAACGATGATTAGCTTTTAGCCAGCTTACGTTTTACGCTTATGCCGGATTTAAGTTTAGACCTAGATTAGGTGTCCTTATT 46 2497391 0.989282309 15 44 412 0.962962963 1.716003344 0.240740741 0.152173913 0.277777778 46 2 0 52 2L:2497304-2497462 8 oaf FBtr0077780|FBtr0077778|FBtr0077777 2497161|2496696|2496696 2498846|2498454|2498846 TACGCTTA 8mer-A1 dme-miR-965-3p 2L + 2497373 2497467 3'utr oaf FlyBase G976.1 ATGTATATTTAACGATGATTAGCTTTTAGCCAGCTTACGTTTTACGCTTATGCCGGATTTAAGTTTAGACCTAGATTAGGTGTCCTTATTTAATT 21 2497414 0.988198333 6 20 189 0.970588235 1.217483944 0.411764706 0.428571429 0.647058824 21 0 1 33 2L:2497373-2497467 8 17 526 FBgn0011818 255.6 10.51666667 16.17333333 0.066510172 1.616481775 1.051112943 24 1 12.5 0.1 dme-miR-932-5p 6mer3-8 GGAATT 2L 2498090 2498095 + 2L_2498090_2498095_+ 0.999960743 0.999807205 0.999883974 0.000108541 oaf FBtr0077777|FBtr0077780|FBtr0077778 2496696|2497161|2496696 2498846|2498846|2498454 2L + 2498041 2498111 3'utr oaf FlyBase G1253.1 ATTCATTGAACTAAGGAATATGTATGTATGTCAGGCGTTGGCAAAACTCGGAATTAATTGTGCTCATAATA 6 2498098 0.973158993 5 6 40 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 2L:2498041-2498111 6 oaf FBtr0077780|FBtr0077778|FBtr0077777 2497161|2496696|2496696 2498846|2498454|2498846 GGAATT 6mer3-8 dme-miR-932-5p 2L + 2498047 2498111 3'utr oaf FlyBase G980.1 TGAACTAAGGAATATGTATGTATGTCAGGCGTTGGCAAAACTCGGAATTAATTGTGCTCATAATA 10 2498098 0.984050599 4 9 69 0.923076923 0.77815125 0 0.3 0.461538462 10 0 1 12 2L:2498047-2498111 6 6 527 FBgn0011818 255.6 10.51666667 16.17333333 0.023474178 0.570522979 0.370981039 -8 -8 -8 0.1 dme-bantam-3p 6mer3-8 TGATCT 2L 2498712 2498717 + 2L_2498712_2498717_+ 0.946072636 0.98744036 0.966756498 0.029251452 oaf FBtr0077777|FBtr0077780 2496696|2497161 2498846|2498846 2L + 2498692 2498754 3'utr oaf FlyBase G1256.1 TTAAAACTGGTAAGACTCGATGATCTGAATTGTGTGAATAGCATTTGCCAATATTAACGATTA 104 2498712 0.812186062 7 102 642 0.991935484 2.089905111 0.290322581 0.163461538 0.298387097 104 1 0 123 2L:2498692-2498754 6 oaf FBtr0077780|FBtr0077777 2497161|2496696 2498846|2498846 TGATCT 6mer3-8 dme-bantam-3p 2L + 2498689 2498737 3'utr oaf FlyBase G981.1 CATTTAAAACTGGTAAGACTCGATGATCTGAATTGTGTGAATAGCATTT 74 2498712 0.823319657 5 73 463 0.98245614 1.572096768 0.289473684 0.337837838 0.570175439 74 0 2 112 2L:2498689-2498737 6 88 528 FBgn0011818 255.6 10.51666667 16.17333333 0.34428795 8.367670365 5.441055235 0 0 0 0.1 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2L 2756584 2756589 + 2L_2756584_2756589_+ 0.991618721 0.935822076 0.963720398 0.039454154 Bacc FBtr0307080|FBtr0335125 2756293|2756293 2757975|2757920 2L + 2756543 2756774 5'utr-coding Bacc FlyBase G1300.2 ACTTTTTTTATAAAAAACTACAAAACAAACAAAAATTGTAATTGAAGGCATTTTCGTATAAACGCAACCTATACGGAATCCAACAAAAAGTAAACATCCCCACTATATACAAGAACAAAACAAAACCAAAATCTTTCTTTCCTTTATCTCATAAGTCCTAATTTAAACGCCCAGTTGATGCGTAAACCAAGATATACAAAGATTTCAAATGTAGCGTAAACGAAGCCCGCGA 111 2756578 0.970383919 30 99 603 0.911764706 1.61630043 0.147058824 0.216216216 0.360294118 111 10 2 124 2L:2756543-2756774 6 Bacc FBtr0307080|FBtr0335125 2756293|2756293 2757975|2757920 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2L + 2756526 2756662 5'utr Bacc FlyBase G1011.1 AATTGTATTTTATGTGTACTTTTTTTATAAAAAACTACAAAACAAACAAAAATTGTAATTGAAGGCATTTTCGTATAAACGCAACCTATACGGAATCCAACAAAAAGTAAACATCCCCACTATATACAAGAACAAAA 53 2756578 0.967969085 18 47 264 0.911392405 1.857332496 0.253164557 0.396226415 0.594936709 53 7 0 72 2L:2756526-2756662 6 34.5 529 FBgn0031453 6284.453333 781.6066667 1192.22 0.005489738 0.044139849 0.028937612 6 6 6 0.1 dme-miR-8-3p 8mer-A1 CAGTATTA 2L 2757260 2757267 + 2L_2757260_2757267_+ 0.670889574 0.670820755 0.670855165 4.86E-05 Bacc FBtr0307080|FBtr0335125 2756293|2756293 2757975|2757920 2L + 2757236 2757330 5'utr Bacc FlyBase G1304.1 ATGACTAATCTTAAGTACTTATGTCAGTATTAAAGCGAGGGCTTTATTATTCTGTTGATAAGTTGTGCGAGCGAGTCGTTGATAAGCCTAATTCA 217 2757257 0.858738949 9 214 1930 0.987234043 2.365487985 0.370212766 0.069124424 0.140425532 217 3 0 232 2L:2757236-2757330 8 Bacc FBtr0307080|FBtr0335125 2756293|2756293 2757975|2757920 CAGTATTA 8mer-A1 dme-miR-8-3p 2L + 2757236 2757329 5'utr Bacc FlyBase G1014.1 ATGACTAATCTTAAGTACTTATGTCAGTATTAAAGCGAGGGCTTTATTATTCTGTTGATAAGTTGTGCGAGCGAGTCGTTGATAAGCCTAATTC 113 2757257 0.867345377 14 105 951 0.943396226 1.875061263 0.402515723 0.309734513 0.509433962 113 8 1 150 2L:2757236-2757329 8 144.5 530 FBgn0031453 6284.453333 781.6066667 1192.22 0.022993249 0.184875598 0.121202463 3 3 3 0.1 dme-miR-277-3p 6mer2-7 GCATTT 2L 2758590 2758595 - 2L_2758590_2758595_- 0.911192962 0.930316021 0.920754492 0.013522003 Snapin FBtr0077737 2758425 2759242 2L - 2758551 2758638 3'utr Snapin FlyBase G7079.1 AGTTCCGGGCTGTTAAGTTCATGGAGCGACGCATTCCTGGCGAGCATTTGTGCATACTGAAGGTCACCAGGTACTTGGCATCATCATG 9 2758591 0.977234402 5 8 59 0.9 0.954242509 0 0.111111111 0.2 9 1 0 9 2L:2758551-2758638 6 Snapin FBtr0077737 2758425 2759242 GCATTT 6mer2-7 dme-miR-277-3p 2L - 2758544 2758614 3'utr Snapin FlyBase G5556.1 AGCGACGCATTCCTGGCGAGCATTTGTGCATACTGAAGGTCACCAGGTACTTGGCATCATCATGACTCGTG 10 2758591 0.970047881 5 10 55 1 1.230448921 0.117647059 0.4 0.647058824 10 0 0 17 2L:2758544-2758614 6 6 531 FBgn0031455 48.16666667 4.743333333 7.233333333 0.124567474 1.26493324 0.829493088 -4 -4 -4 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 2L 2763587 2763593 - 2L_2763587_2763593_- 0.521223855 0.521223855 0.521223855 0 CG3077 FBtr0335129 2763414 2764305 2L - 2763565 2763609 3'utr CG3077 FlyBase G7083.1 TTCCAGCCCAATGTCTTGTGATTGCTTTTTCAATAAATAAATATT 58 2763594 0.601201452 6 54 474 0.941176471 1.329058719 0.029411765 0.155172414 0.279411765 58 2 2 64 2L:2763565-2763609 7 CG3077 FBtr0335129 2763414 2764305 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 2763555 2763611 3'utr CG3077 FlyBase G5559.1 TCTTCCAGCCCAATGTCTTGTGATTGCTTTTTCAATAAATAAATATTATACTCAAGT 35 2763594 0.986368474 7 34 284 0.961538462 1.22184875 0.038461538 0.428571429 0.615384615 35 0 2 50 2L:2763555-2763611 7 44.5 532 FBgn0031457 325.67 20.19 30.60333333 0.136641385 2.204061417 1.454089968 1 1 1 0.1 dme-miR-283-5p 6mer3-8 TGATAT 2L 2763811 2763816 - 2L_2763811_2763816_- 0.999193541 0.999845334 0.999519438 0.000460892 CG3077 FBtr0335129 2763414 2764305 2L - 2763784 2763838 3'utr CG3077 FlyBase G7084.1 ATGTTTCATGTTACGTATTGTTTGATATCTCTTCAATCGTCTAGTTTGTAGTTTG 11 2763828 0.816704759 5 9 122 0.769230769 1 0.076923077 0.181818182 0.307692308 11 3 0 10 2L:2763784-2763838 6 CG3077 FBtr0335129 2763414 2764305 TGATAT 6mer3-8 dme-miR-283-5p 2L - 2763764 2763884 3'utr CG3077 FlyBase G5560.1 CGTAACGTACTGCTTTGGTAACTTAAAGGTTAGTCTAAGCATATTTATGTTTCATGTTACGTATTGTTTGATATCTCTTCAATCGTCTAGTTTGTAGTTTGTACCCAGTGGGAGTTGTGAT 18 2763817 0.992229097 11 14 171 0.884615385 1.361727836 0.269230769 0.333333333 0.538461538 18 3 0 23 2L:2763764-2763884 6 6.5 533 FBgn0031457 325.67 20.19 30.60333333 0.019958854 0.321941555 0.212395164 12 1 6.5 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 2811983 2811990 + 2L_2811983_2811990_+ 0.500108723 0.500108298 0.500108511 2.83E-07 daw FBtr0077720|FBtr0077721|FBtr0335151 2811758|2811758|2811758 2812145|2812145|2812376 2L + 2811906 2812042 3'utr daw FlyBase G1341.1 ATTAGCGTTGTCATTTAATCGTAGTTACCTGTAGTGCCTGAGCTGCCACTAGTTGATAGTTAAAAGCTAAAGTCAATGTACTTAAGCTCTCGAAGTATGTAGGTAGTTAGCCAATGGCTTCAATTAATTTAATAGCT 1340 2811982 0.830240232 34 1281 9622 0.956386293 2.072165028 0.251713396 0.163432836 0.301557632 1340 58 12 1535 2L:2811906-2812042 8 daw FBtr0335151|FBtr0077720|FBtr0077721 2811758|2811758|2811758 2812376|2812145|2812145 GTACTTAA 8mer-A1 dme-miR-252-5p 2L + 2811900 2812040 3'utr daw FlyBase G1042.1 ATTTACATTAGCGTTGTCATTTAATCGTAGTTACCTGTAGTGCCTGAGCTGCCACTAGTTGATAGTTAAAAGCTAAAGTCAATGTACTTAAGCTCTCGAAGTATGTAGGTAGTTAGCCAATGGCTTCAATTAATTTAATAG 935 2811982 0.954507947 31 891 6677 0.953058321 1.848351197 0.280227596 0.351871658 0.568990043 935 48 18 1340 2L:2811900-2812040 8 799 534 FBgn0031461 129.3333333 5.623333333 8.523333333 6.177835052 142.0865442 93.74266719 1 1 1 0.1 dme-miR-12-5p 8mer-A1 AATACTCA 2L 281843 281850 + 2L_281843_281850_+ 0.643803167 0.643924787 0.643863977 8.60E-05 smo FBtr0078129 281513 282167 2L + 281799 281872 3'utr smo FlyBase G662.1 CGATTACTGGAACAGACTGAGCGAAACTAGAACTACGAATTACGAATACTCATAGTCATTAGGCTGCAACTTTA 26 281857 0.726756547 10 24 165 0.84375 1.431363764 0.125 0.153846154 0.3125 26 5 0 27 2L:281799-281872 8 smo FBtr0078129 281513 282167 AATACTCA 8mer-A1 dme-miR-12-5p 2L + 281833 281870 3'utr smo FlyBase G532.1 ACGAATTACGAATACTCATAGTCATTAGGCTGCAACTT 13 281856 0.624053993 5 13 81 1 1.278753601 0.157894737 0.307692308 0.526315789 13 0 0 19 2L:281833-281870 8 17 535 FBgn0003444 542.8533333 16.28333333 24.88333333 0.031316009 1.044012282 0.683188212 -14 -13 -13.5 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2L 2856844 2856849 + 2L_2856844_2856849_+ 0.997221145 0.991379977 0.994300561 0.004130281 RpS21 FBtr0335131|FBtr0077623 2856639|2856639 2857029|2857029 2L + 2856828 2856891 3'utr RpS21 FlyBase G1348.1 TATTCTGACTTCCAATAAGACTTTTCAGCCACTAAGAATTTACGGGTGCTTTCAGGAACCAATT 45 2856851 0.899704603 4 42 321 0.980769231 1.707570176 0.076923077 0.155555556 0.269230769 45 1 0 51 2L:2856828-2856891 6 RpS21 FBtr0077623|FBtr0335131 2856639|2856639 2857029|2857029 AAGACT 6mer3-8 dme-miR-14-3p 2L + 2856802 2856859 3'utr RpS21 FlyBase G1051.1 CTAAGATGCTTAGTGTGTGGAGTAATTATTCTGACTTCCAATAAGACTTTTCAGCCAC 24 2856851 0.980093334 3 24 170 1 1.612783857 0.146341463 0.5 0.707317073 24 0 0 41 2L:2856802-2856859 6 29.5 536 FBgn0015521 2211.816667 583.0333333 884.8866667 0.013337453 0.05059745 0.033337603 -7 -7 -7 0.1 dme-miR-2b-2-5p 6mer2-7 TGAAGA 2L 2868070 2868075 + 2L_2868070_2868075_+ 0.972254022 0.9989039 0.985578961 0.018844325 CG2991 FBtr0077626|FBtr0077627|FBtr0077625 2867666|2867666|2867666 2868548|2868548|2868548 2L + 2867900 2868125 3'utr CG2991 FlyBase G1366.1 TTTCGTCTCTCAAATTATCATGCAGATTTCCAGAAGCAAAGTGTATTACAAGAAGCCAAATATTACGTAGAATAAGTGTAGGTCAGTATCAATTGCGAAAGCGAAACGGAAACGGAAACAGAAACGAGAACATCCTGAGATTATGATTACGAACGCGTTGCCAAGTAGCCTGAAGAGCGAATAAGCGAGAAGATAGTGCTTAGATGCGCCAGTGAGTCAGTCCCCA 138 2868065 0.969029327 32 122 632 0.894409938 2.158362492 0.322981366 0.139705882 0.273291925 136 17 0 144 2L:2867900-2868125 6 CG2991 FBtr0077627|FBtr0077625|FBtr0077626 2867666|2867666|2867666 2868548|2868548|2868548 TGAAGA 6mer2-7 dme-miR-2b-2-5p 2L + 2868019 2868149 3'utr CG2991 FlyBase G1070.1 AGAAACGAGAACATCCTGAGATTATGATTACGAACGCGTTGCCAAGTAGCCTGAAGAGCGAATAAGCGAGAAGATAGTGCTTAGATGCGCCAGTGAGTCAGTCCCCATGCTGATTTATAGTTTATAGTTTT 75 2868065 0.945112188 18 72 309 0.957983193 2.056904851 0.378151261 0.4 0.621848739 75 5 0 114 2L:2868019-2868149 6 37 537 FBgn0031474 1557.266667 62.85666667 96.35333333 0.023759579 0.588640823 0.384003321 5 5 5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 2868509 2868515 + 2L_2868509_2868515_+ 0.801690299 0.80170032 0.80169531 7.07E-06 CG2991 FBtr0077626|FBtr0077626|FBtr0077626|FBtr0077627|FBtr0077627|FBtr0077627|FBtr0077625|FBtr0077625|FBtr0077625 2867666|2867666|2867666|2867666|2867666|2867666|2867666|2867666|2867666 2868548|2868548|2868548|2868548|2868548|2868548|2868548|2868548|2868548 2L + 2868322 2868534 3'utr CG2991 FlyBase G1368.1 AAGTTTACTCCTTAAGAAACTGATTTGTATAAGCTGCGCCCATATATACATACACACGAACATATATAATATATATATATAAATTTTATTGTAGTTACTACACAAAATTTGTCAAAGCAAAGAAAAACAAAACAAAATCCACAAAAGGAAAGAATCCAACATACAATTTAAGTTACCATACAATTTTTGTGATAAAACTAACAAATAAAATAC 236 2868507 0.999997792 26 221 1812 0.940972222 1.65481804 0.038194444 0.177966102 0.326388889 236 12 5 271 2L:2868322-2868534 7 CG2991 FBtr0077627|FBtr0077627|FBtr0077627|FBtr0077625|FBtr0077625|FBtr0077625|FBtr0077626|FBtr0077626|FBtr0077626 2867666|2867666|2867666|2867666|2867666|2867666|2867666|2867666|2867666 2868548|2868548|2868548|2868548|2868548|2868548|2868548|2868548|2868548 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 2868490 2868533 3'utr CG2991 FlyBase G1072.1 TAAGTTACCATACAATTTTTGTGATAAAACTAACAAATAAAATA 112 2868507 0.651175358 8 108 917 0.95483871 1.693140461 0 0.276785714 0.477419355 112 5 2 148 2L:2868490-2868533 7 146.5 538 FBgn0031474 1557.266667 62.85666667 96.35333333 0.094075089 2.330699475 1.520445582 2 2 2 0.1 dme-miR-190-5p 6mer3-8 ACATAT 2L 2868670 2868675 - 2L_2868670_2868675_- 0.999999999 1 0.999999999 0 CG31694 FBtr0077685 2868625 2869170 2L - 2868648 2868724 3'utr CG31694 FlyBase G7116.1 TCATAACTTGACATGGCTTTTAATACGCATAATAAGCGGCTCTATGAATACATATATTTTGTAGTAAATAAGTGTAA 14 2868702 0.900111063 7 12 126 0.75 1.079181246 0.0625 0.071428571 0.1875 14 4 0 12 2L:2868648-2868724 6 CG31694 FBtr0077685 2868625 2869170 ACATAT 6mer3-8 dme-miR-190-5p 2L - 2868651 2868702 3'utr CG31694 FlyBase G5583.1 ATACGCATAATAAGCGGCTCTATGAATACATATATTTTGTAGTAAATAAGTG 6 2868669 0.98745762 6 6 39 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2L:2868651-2868702 6 4.5 539 FBgn0051694 1042 47.93 73.36 0.004318618 0.093886918 0.06134133 27 -6 10.5 0.1 dme-miR-965-3p 7mer-m8 TACGCTT 2L 2868815 2868821 - 2L_2868815_2868821_- 0.615665025 0.60487337 0.610269198 0.007630814 CG31694 FBtr0077685 2868625 2869170 2L - 2868733 2868859 3'utr CG31694 FlyBase G7117.1 GAATTTAAATTAACACTGCGATTGTTACGACTGGCATTTACGCTTTGCGATTTGGGTTAACCTCTTTTGTTGTTGATCTTTTTAAATTACAAGCGTAGGAAAACATAGTCTGCTTTAATGCTGCGAA 128 2868837 0.747326193 32 126 1043 0.9875 2.198657087 0.2375 0.1875 0.35 128 2 0 158 2L:2868733-2868859 7 CG31694 FBtr0077685 2868625 2869170 TACGCTT 7mer-m8 dme-miR-965-3p 2L - 2868724 2868855 3'utr CG31694 FlyBase G5584.1 TTAAATTAACACTGCGATTGTTACGACTGGCATTTACGCTTTGCGATTTGGGTTAACCTCTTTTGTTGTTGATCTTTTTAAATTACAAGCGTAGGAAAACATAGTCTGCTTTAATGCTGCGAAAAAGTTATT 99 2868837 0.780898553 23 92 734 0.938650307 1.707570176 0.263803681 0.454545455 0.668711656 99 8 2 153 2L:2868724-2868855 7 40 540 FBgn0051694 1042 47.93 73.36 0.038387716 0.834550386 0.54525627 16 16 16 0.1 dme-miR-79-3p 7mer-m8 TAGCTTT 2L 2876816 2876822 + 2L_2876816_2876822_+ 0.620203359 0.620185604 0.620194482 1.26E-05 CG8814 FBtr0077629 2876361 2877168 2L + 2876787 2876841 3'utr CG8814 FlyBase G1379.1 TCTTCGGTTACGGGCACGAGCTTGGTCTTTAGCTTTCTTCTATCCTAGAAAGCGC 27 2876810 0.732747655 7 27 259 1 1.505149978 0 0.148148148 0.28125 27 0 0 32 2L:2876787-2876841 7 CG8814 FBtr0077629 2876361 2877168 TAGCTTT 7mer-m8 dme-miR-79-3p 2L + 2876788 2876826 3'utr CG8814 FlyBase G1079.1 CTTCGGTTACGGGCACGAGCTTGGTCTTTAGCTTTCTTC 23 2876809 0.750623232 6 21 186 0.972222222 1.544068044 0.138888889 0.434782609 0.638888889 23 1 0 35 2L:2876788-2876826 7 23 541 FBgn0031478 361.3733333 24.66 37.60666667 0.063646091 0.932684509 0.611593689 6 7 6.5 0.1 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 2877098 2877105 - 2L_2877098_2877105_- 0.625364888 0.625364867 0.625364877 0 Prx6005 FBtr0077684 2877089 2877187 2L - 2877090 2877115 3'utr Prx6005 FlyBase G7126.1 CAATAAAGTATACGCTTACAACCGTA 8 2877105 0.758865998 2 6 28 0.916666667 1.041392685 0 0.25 0.5 8 1 0 11 2L:2877090-2877115 8 Prx6005 FBtr0077684 2877089 2877187 TACGCTTA 8mer-A1 dme-miR-965-3p 2L - 2877090 2877116 3'utr Prx6005 FlyBase G5590.1 ACAATAAAGTATACGCTTACAACCGTA 6 2877105 0.731785716 2 6 28 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2L:2877090-2877116 8 6 542 FBgn0031479 67.29333333 9.753333333 14.81333333 0.089161878 0.615174299 0.405040504 0 0 0 0.1 dme-bantam-3p 6mer3-8 TGATCT 2L 2880714 2880719 - 2L_2880714_2880719_- 0.987603124 0.998170875 0.992886999 0.007472563 NTPase FBtr0332459|FBtr0332460|FBtr0077683|FBtr0077682|FBtr0077680 2880702|2880702|2880703|2880702|2880702 2881227|2881227|2881227|2881227|2881227 2L - 2880701 2880737 5'utr-coding NTPase FlyBase G7128.1 AATAAATCAAATGTTAACTGATCTGAATTAAAGTAAA 9 2880710 0.701303948 5 8 69 0.888888889 0.903089987 0.111111111 0 0 9 1 0 8 2L:2880701-2880737 6 NTPase FBtr0077682|FBtr0077680|FBtr0332460|FBtr0077683|FBtr0332459 2880702|2880702|2880702|2880703|2880702 2881227|2881227|2881227|2881227|2881227 TGATCT 6mer3-8 dme-bantam-3p 2L - 2880702 2880729 5'utr-coding NTPase FlyBase G5592.1 AAATGTTAACTGATCTGAATTAAAGTAA 9 2880710 0.660348524 4 8 64 1 1.113943352 0.076923077 0.333333333 0.538461538 9 0 0 13 2L:2880702-2880729 6 9 543 FBgn0024947 993.2366667 56.17666667 85.57666667 0.009061284 0.160208865 0.105168854 -9 -9 -9 0.1 dme-miR-1012-3p 6mer2-7 TGACTA 2L 2880968 2880973 - 2L_2880968_2880973_- 0.979104552 0.70602221 0.842563381 0.193098417 NTPase FBtr0332459|FBtr0332460|FBtr0077683|FBtr0077682|FBtr0077680 2880702|2880702|2880703|2880702|2880702 2881227|2881227|2881227|2881227|2881227 2L - 2880912 2881012 5'utr NTPase FlyBase G7130.1 TCGTTTCAATTGCCTCTAATTGAGCTAACCCATACACGGTGACTACACTTAGCGTTTAGTTTGTAATTCCAATTTTGTGTGATTCGCCATATTTGTAATGC 50 2880980 0.946440731 18 48 332 0.964285714 1.73239376 0.321428571 0.12 0.214285714 50 2 0 54 2L:2880912-2881012 6 NTPase FBtr0077682|FBtr0077680|FBtr0332460|FBtr0077683|FBtr0332459 2880702|2880702|2880702|2880703|2880702 2881227|2881227|2881227|2881227|2881227 TGACTA 6mer2-7 dme-miR-1012-3p 2L - 2880912 2880995 5'utr NTPase FlyBase G5594.1 AATTGAGCTAACCCATACACGGTGACTACACTTAGCGTTTAGTTTGTAATTCCAATTTTGTGTGATTCGCCATATTTGTAATGC 34 2880980 0.934436892 11 32 224 0.93877551 1.662757832 0.204081633 0.294117647 0.510204082 34 3 0 46 2L:2880912-2880995 6 23 544 FBgn0024947 993.2366667 56.17666667 85.57666667 0.023156616 0.409422655 0.26876485 7 7 7 0.1 dme-miR-932-5p 6mer2-7 GAATTG 2L 293397 293402 - 2L_293397_293402_- 0.993790051 0.999919242 0.996854646 0.004333928 U2af38 FBtr0078133|FBtr0333408 293351|292957 293621|293621 2L - 293390 293438 3'utr U2af38 FlyBase G6509.1 AAACCCCCCGCGAAATATTTTACCGAGCGCCCATTAGAATTGTAATTTA 18 293419 0.976038361 5 18 119 1 1.301029996 0.25 0.111111111 0.2 18 0 0 20 2L:293390-293438 6 U2af38 FBtr0078133|FBtr0333408 293351|292957 293621|293621 GAATTG 6mer2-7 dme-miR-932-5p 2L - 293391 293431 3'utr U2af38 FlyBase G5089.1 CCGCGAAATATTTTACCGAGCGCCCATTAGAATTGTAATTT 6 293419 0.967724073 3 5 31 1 0.84509804 0 0.2 0.428571429 5 0 0 7 2L:293391-293431 6 6 545 FBgn0017457 340.28 32.69666667 50.14 0.017632538 0.183504944 0.119664938 17 17 17 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 297183 297188 + 2L_297183_297188_+ 0.993777754 0.994363901 0.994070828 0.000414435 Hop FBtr0078131 297048 297449 2L + 297095 297289 3'utr Hop FlyBase G678.2 ACACACAAACCCCATTGATAAACATTCAGGAGAGAACCATTACGCATTATTATGGCGTCTCTAAGCTGGTTAACCAATATATCGTTTTTGATGAAACGGGCCACAATTAATGCTAAACGTAATTACCTAAGAAATCACATCGCCTATTCGCAGAACGACGATAACTACCATTAACAGAAATTTAAACTAAAAGGA 74 297201 0.948156903 25 67 352 0.886597938 1.633468456 0.113402062 0.243243243 0.422680412 74 10 1 86 2L:297095-297289 6 Hop FBtr0078131 297048 297449 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L + 297084 297292 3'utr Hop FlyBase G548.1 ATCACTAACTCACACACAAACCCCATTGATAAACATTCAGGAGAGAACCATTACGCATTATTATGGCGTCTCTAAGCTGGTTAACCAATATATCGTTTTTGATGAAACGGGCCACAATTAATGCTAAACGTAATTACCTAAGAAATCACATCGCCTATTCGCAGAACGACGATAACTACCATTAACAGAAATTTAAACTAAAAGGAGAA 45 297164 0.968926417 22 42 236 0.944444444 1.531478917 0.166666667 0.4 0.625 45 3 1 68 2L:297084-297292 6 3.5 546 FBgn0024352 5110.506667 309.7066667 476.4533333 0.000684864 0.011301016 0.007345945 -18 19 0.5 0.1 dme-miR-79-3p 6mer3-8 TAGCTT 2L 297395 297400 + 2L_297395_297400_+ 0.999790369 0.999538801 0.999664585 0.000177908 Hop FBtr0078131 297048 297449 2L + 297302 297415 3'utr Hop FlyBase G679.1 ATTGATAAATGTCTGCCTAATTGATTTACGCAGACGGGTGGAGTAGGCTCCAAACGTCATGGTCCTTATTTTCTTACTACAATAAATATGCTGTAGCTTAGCTCTAAAATAAGT 35 297390 0.807157538 11 32 257 0.928571429 0.989004616 0.166666667 0.142857143 0.285714286 35 0 3 39 2L:297302-297415 6 Hop FBtr0078131 297048 297449 TAGCTT 6mer3-8 dme-miR-79-3p 2L + 297300 297432 3'utr Hop FlyBase G549.1 TCATTGATAAATGTCTGCCTAATTGATTTACGCAGACGGGTGGAGTAGGCTCCAAACGTCATGGTCCTTATTTTCTTACTACAATAAATATGCTGTAGCTTAGCTCTAAAATAAGTTTCTGTTTGTACAATAA 24 297390 0.912276558 13 22 196 0.935483871 1.462397998 0.096774194 0.208333333 0.387096774 24 2 0 29 2L:297300-297432 6 10 547 FBgn0024352 5110.506667 309.7066667 476.4533333 0.001956753 0.032288617 0.020988414 5 5 5 0.1 dme-miR-184-5p 8mer-A1 TGATAAGA 2L 2974707 2974714 + 2L_2974707_2974714_+ 0.601215763 0.601217688 0.601216725 1.34E-06 gammaTub23C FBtr0077641 2974603 2974858 2L + 2974692 2974733 3'utr gammaTub23C FlyBase G1415.1 ATCCTTAAGTAGTAGTGATAAGACGATTGTTGGTATGACTCG 6 2974722 0.678962101 4 6 38 1 0.77815125 0.666666667 0 0 6 0 0 6 2L:2974692-2974733 8 gammaTub23C FBtr0077641 2974603 2974858 TGATAAGA 8mer-A1 dme-miR-184-5p 2L + 2974699 2974751 3'utr gammaTub23C FlyBase G1100.1 AGTAGTAGTGATAAGACGATTGTTGGTATGACTCGCATGTATGTAAACGCTGT 6 2974718 0.986652589 3 4 39 0.909090909 1 0.363636364 0.5 0.727272727 6 1 0 10 2L:2974699-2974751 8 5 548 FBgn0260639 328 21.35666667 32.38 0.015243902 0.234118932 0.154416306 -15 -11 -13 0.1 dme-miR-980-3p 6mer2-7 GCAGCT 2L 2974991 2974996 - 2L_2974991_2974996_- 0.999960318 0.99841087 0.999185594 0.001095591 CG9641 FBtr0077677|FBtr0077676 2974857|2974857 2975177|2975177 2L - 2974978 2975024 3'utr CG9641 FlyBase G7155.1 GACAACGGAACAAGGACAGCAGTATCGTGCAGCTTCACAAGTGAATT 6 2974997 0.937676622 3 5 21 1 0.903089987 0.625 0.333333333 0.5 6 0 0 8 2L:2974978-2975024 6 CG9641 FBtr0077677|FBtr0077676 2974857|2974857 2975177|2975177 GCAGCT 6mer2-7 dme-miR-980-3p 2L - 2974986 2975026 3'utr CG9641 FlyBase G5611.1 ATGACAACGGAACAAGGACAGCAGTATCGTGCAGCTTCACA 8 2975002 0.948118601 3 7 25 0.909090909 1 0.272727273 0.375 0.545454545 8 1 0 10 2L:2974986-2975026 6 5.5 549 FBgn0031483 465.01 30.09666667 46.35666667 0.011827703 0.18274449 0.118645287 1 6 3.5 0.1 dme-miR-999-3p 7mer-A1 GTTAACA 2L 2989543 2989549 + 2L_2989543_2989549_+ 0.763262695 0.799672151 0.781467423 0.025745404 Bem46 FBtr0077643 2989510 2990075 2L + 2989522 2989560 3'utr Bem46 FlyBase G1427.1 ATCAAGTGTTCAATTGACTGTGTTAACACTGCGAATGGT 21 2989536 0.723940947 6 21 174 1 1.397940009 0.16 0.142857143 0.28 21 0 0 25 2L:2989522-2989560 7 Bem46 FBtr0077643 2989510 2990075 GTTAACA 7mer-A1 dme-miR-999-3p 2L + 2989516 2989552 3'utr Bem46 FlyBase G1112.1 GAATACATCAAGTGTTCAATTGACTGTGTTAACACTG 15 2989536 0.947763754 6 13 124 0.875 0.84509804 0.041666667 0.4 0.625 15 1 2 21 2L:2989516-2989552 7 18 550 FBgn0025109 189.0366667 13.54 20.76666667 0.095219622 1.329394387 0.866773676 7 7 7 0.1 dme-miR-33-5p 7mer-m1 AATGCAC 2L 2998420 2998426 + 2L_2998420_2998426_+ 0.818459203 0.770748287 0.794603745 0.033736701 CG3558 FBtr0331653|FBtr0077644|FBtr0273230|FBtr0077645 2998247|2998247|2998247|2998247 2998726|2998726|2998726|2998726 2L + 2998407 2998443 3'utr CG3558 FlyBase G1447.1 AGATTTACAAGTTAATGCACACGGACTCAACTAAAAA 6 2998422 0.877258049 3 6 24 1 0.77815125 0 0 0 6 0 0 6 2L:2998407-2998443 7 CG3558 FBtr0273230|FBtr0077645|FBtr0331653|FBtr0077644 2998247|2998247|2998247|2998247 2998726|2998726|2998726|2998726 AATGCAC 7mer-m1 dme-miR-33-5p 2L + 2998383 2998438 3'utr CG3558 FlyBase G1128.1 TTAACGAACAATGCAGTTTTGAACAGATTTACAAGTTAATGCACACGGACTCAACT 11 2998421 0.886031998 7 11 49 1 1.301029996 0.05 0.545454545 0.75 11 0 0 20 2L:2998383-2998438 7 7 551 FBgn0025681 2409.06 69.7 106.8566667 0.002905698 0.100430416 0.065508313 -2 -1 -1.5 0.1 dme-miR-317-3p 7mer-A1 GTGTTCA 2L 2998524 2998530 + 2L_2998524_2998530_+ 0.823349562 0.823349562 0.823349562 0 CG3558 FBtr0331653|FBtr0077644|FBtr0273230|FBtr0077645 2998247|2998247|2998247|2998247 2998726|2998726|2998726|2998726 2L + 2998465 2998535 3'utr CG3558 FlyBase G1448.1 GCGTTAAACAAATAGATTTAGGTTAAATGTTTTAAGTGAATCGGGACGGTGGATCTTAAGTGTTCAGATGT 17 2998520 0.981275975 8 12 134 0.761904762 0.726998728 0.666666667 0.176470588 0.333333333 17 3 2 16 2L:2998465-2998535 7 CG3558 FBtr0273230|FBtr0077645|FBtr0331653|FBtr0077644 2998247|2998247|2998247|2998247 2998726|2998726|2998726|2998726 GTGTTCA 7mer-A1 dme-miR-317-3p 2L + 2998474 2998546 3'utr CG3558 FlyBase G1129.1 AAATAGATTTAGGTTAAATGTTTTAAGTGAATCGGGACGGTGGATCTTAAGTGTTCAGATGTAAACAAATATT 16 2998519 0.980150922 9 15 106 0.954545455 1.322219295 0.590909091 0.3125 0.5 16 1 0 21 2L:2998474-2998546 7 11.5 552 FBgn0025681 2409.06 69.7 106.8566667 0.004773646 0.164992826 0.1076208 4 5 4.5 0.1 dme-miR-8-3p 7mer-A1 AGTATTA 2L 2998696 2998702 + 2L_2998696_2998702_+ 0.722504002 0.823347463 0.772925732 0.071307123 CG3558 FBtr0331653|FBtr0077644|FBtr0273230|FBtr0077645 2998247|2998247|2998247|2998247 2998726|2998726|2998726|2998726 2L + 2998678 2998732 3'utr CG3558 FlyBase G1449.1 ATGTAAAGCCAACTTGAAAGTATTAAATTGGTCCAAGTAAATGCACAGCCAAGAA 15 2998691 0.959410576 6 15 77 1 1.230448921 0.235294118 0.133333333 0.235294118 15 0 0 17 2L:2998678-2998732 7 CG3558 FBtr0273230|FBtr0077645|FBtr0331653|FBtr0077644 2998247|2998247|2998247|2998247 2998726|2998726|2998726|2998726 AGTATTA 7mer-A1 dme-miR-8-3p 2L + 2998678 2998706 3'utr CG3558 FlyBase G1130.1 ATGTAAAGCCAACTTGAAAGTATTAAATT 6 2998691 0.835623903 3 6 41 1 0.77815125 0 0 0 6 0 0 6 2L:2998678-2998706 7 8.5 553 FBgn0025681 2409.06 69.7 106.8566667 0.003528347 0.12195122 0.079545809 5 5 5 0.1 dme-miR-11-3p 7mer-m1 TGTGATG 2L 3021308 3021314 + 2L_3021308_3021314_+ 0.520677651 0.458095684 0.489386667 0.044252157 CG17264 FBtr0331628|FBtr0077647 3021226|3021226 3021506|3021506 2L + 3021268 3021328 3'utr CG17264 FlyBase G1457.1 TTATTTTTCAATTATCGAAATAGAGTTAAGATACTGTGTTTGTGATGACTTAAATACTTCT 133 3021307 0.777493441 12 125 1318 0.937888199 1.701855693 0.049689441 0.165413534 0.310559006 133 8 2 151 2L:3021268-3021328 7 CG17264 FBtr0077647|FBtr0331628 3021226|3021226 3021506|3021506 TGTGATG 7mer-m1 dme-miR-11-3p 2L + 3021271 3021375 3'utr CG17264 FlyBase G1132.1 TTTTTCAATTATCGAAATAGAGTTAAGATACTGTGTTTGTGATGACTTAAATACTTCTATTTTATTTGTAGGTTGATAGTAACATTCCCTGGATAAATAGTATGT 91 3021307 0.894286967 17 84 825 0.919117647 1.096910013 0.058823529 0.32967033 0.551470588 91 2 9 125 2L:3021271-3021375 7 98 554 FBgn0031490 217.3433333 9.67 14.60333333 0.450899498 10.1344364 6.710796622 1 1 1 0.1 dme-miR-8-3p 6mer2-7 AGTATT 2L 3021432 3021437 + 2L_3021432_3021437_+ 0.999999999 0.999999999 0.999999999 0 CG17264 FBtr0331628|FBtr0077647 3021226|3021226 3021506|3021506 2L + 3021412 3021446 3'utr CG17264 FlyBase G1459.1 AAACTACAATGATTCAAAATAGTATTCTAAGCGAC 13 3021432 0.90615954 4 12 78 0.933333333 0.84509804 0.733333333 0.153846154 0.266666667 13 0 1 14 2L:3021412-3021446 6 CG17264 FBtr0077647|FBtr0331628 3021226|3021226 3021506|3021506 AGTATT 6mer2-7 dme-miR-8-3p 2L + 3021416 3021445 3'utr CG17264 FlyBase G1133.1 TACAATGATTCAAAATAGTATTCTAAGCGA 6 3021432 0.712939716 4 5 36 0.777777778 0.84509804 0.222222222 0.5 0.666666667 6 2 0 7 2L:3021416-3021445 6 8.5 555 FBgn0031490 217.3433333 9.67 14.60333333 0.03910863 0.879007239 0.582058891 0 0 0 0.1 dme-miR-12-5p 6mer3-8 AATACT 2L 3021517 3021522 - 2L_3021517_3021522_- 0.995704196 0.997359039 0.996531618 0.00117012 alpha4GT1 FBtr0077670 3021307 3021785 2L - 3021452 3021573 3'utr alpha4GT1 FlyBase G7221.1 ATTTTGCGATAAGCTTTACCTCTCCGATTGCACATTATATATATGTATTTAAATACTGATTGTGAATATAATTCGATAATATAAGCAAGCGAACAACTCACATAGACATTTATTGAAAGCTG 49 3021514 0.983700733 14 49 380 1 1.792391689 0.064516129 0.244897959 0.403225806 49 0 0 62 2L:3021452-3021573 6 alpha4GT1 FBtr0077670 3021307 3021785 AATACT 6mer3-8 dme-miR-12-5p 2L - 3021459 3021584 3'utr alpha4GT1 FlyBase G5645.1 AATGGTTTTTTATTTTGCGATAAGCTTTACCTCTCCGATTGCACATTATATATATGTATTTAAATACTGATTGTGAATATAATTCGATAATATAAGCAAGCGAACAACTCACATAGACATTTATTG 44 3021514 0.948261835 13 42 352 0.9375 1.77815125 0.078125 0.318181818 0.53125 44 4 0 60 2L:3021459-3021584 6 30.5 556 FBgn0031491 448.0066667 31.68666667 48.21 0.068079344 0.962549968 0.632648828 -8 -8 -8 0.1 dme-miR-31a-5p 6mer2-7 CTTGCC 2L 3026244 3026249 + 2L_3026244_3026249_+ 0.999653396 0.999947101 0.999800249 0.000207677 CG3542 FBtr0077648 3026115 3026439 2L + 3026222 3026341 3'utr CG3542 FlyBase G1465.1 TGGACAAGTTCTCTTTTCAGTCCTTGCCTTCCACTGCACTCTGCTTCGTTTGGTTTAGATACTGTCCTGGTCCCAGCACAAACCACACAGCGAACCACAATTGTAATTTCTTAGTCTCAA 15 3026245 0.988193845 8 15 133 1 1.204119983 0.25 0.066666667 0.125 15 0 0 16 2L:3026222-3026341 6 CG3542 FBtr0077648 3026115 3026439 CTTGCC 6mer2-7 dme-miR-31a-5p 2L + 3026200 3026262 3'utr CG3542 FlyBase G1137.1 AGCTAGCCCTGGACTCAGTTGCTGGACAAGTTCTCTTTTCAGTCCTTGCCTTCCACTGCACTC 7 3026245 0.981976273 3 7 56 1 1.079181246 0.083333333 0.571428571 0.75 7 0 0 12 2L:3026200-3026262 6 8 557 FBgn0031492 1159.55 48.74 75.20666667 0.006899228 0.164136233 0.106373548 -1 -1 -1 0.1 dme-miR-79-3p 6mer3-8 TAGCTT 2L 302727 302732 + 2L_302727_302732_+ 1 0.999999982 0.999999991 0 Pi3K21B FBtr0331206|FBtr0331207|FBtr0331208|FBtr0331205 302658|302658|302658|302658 305233|305233|305233|303934 2L + 302653 302765 stop_codon Pi3K21B FlyBase G695.1 GCAGTAGGAGCCGCACATCAAATTGCCGCTAAACGAGCCCTCAACCTCAGGCTAGCTATCTATCTCTCTAATTCTAGCTTGCTCTAAAGCCCTAACTCTCTCTAACTCTAGAT 36 302699 0.976526844 18 35 229 0.976190476 1.612783857 0.119047619 0.138888889 0.261904762 36 1 0 41 2L:302653-302765 6 Pi3K21B FBtr0331205|FBtr0331208|FBtr0331207|FBtr0331206 302658|302658|302658|302658 303934|305233|305233|305233 TAGCTT 6mer3-8 dme-miR-79-3p 2L + 302658 302767 stop_codon Pi3K21B FlyBase G558.1 AGGAGCCGCACATCAAATTGCCGCTAAACGAGCCCTCAACCTCAGGCTAGCTATCTATCTCTCTAATTCTAGCTTGCTCTAAAGCCCTAACTCTCTCTAACTCTAGATAT 29 302705 0.982144712 11 24 172 0.833333333 1.602059991 0.083333333 0.413793103 0.645833333 29 8 0 40 2L:302658-302767 6 4 558 FBgn0020622 2718.376667 71.30333333 109.6833333 0.001471466 0.056098359 0.036468622 28 22 25 0.1 dme-miR-8-3p 6mer3-8 CAGTAT 2L 302832 302837 + 2L_302832_302837_+ 0.999999175 0.999999993 0.999999584 5.66E-07 Pi3K21B FBtr0331206|FBtr0331207|FBtr0331208|FBtr0331205 302658|302658|302658|302658 305233|305233|305233|303934 2L + 302797 302837 3'utr Pi3K21B FlyBase G696.1 TGCAGGCTCTGTCAAAAGGCTTAAGCTGGATATGCCAGTAT 9 302805 0.746797221 6 8 53 1 0.954242509 0.555555556 0 0 9 0 0 9 2L:302797-302837 6 Pi3K21B FBtr0331205|FBtr0331208|FBtr0331207|FBtr0331206 302658|302658|302658|302658 303934|305233|305233|305233 CAGTAT 6mer3-8 dme-miR-8-3p 2L + 302797 302837 3'utr Pi3K21B FlyBase G559.1 TGCAGGCTCTGTCAAAAGGCTTAAGCTGGATATGCCAGTAT 8 302828 0.75013305 5 8 48 1 1.113943352 0.153846154 0.5 0.692307692 8 0 0 13 2L:302797-302837 6 4.5 559 FBgn0020622 2718.376667 71.30333333 109.6833333 0.0016554 0.063110654 0.0410272 27 4 15.5 0.1 dme-miR-11-3p 7mer-m1 TGTGATG 2L 303180 303186 + 2L_303180_303186_+ 0.612066758 0.612071019 0.612068889 2.97E-06 Pi3K21B FBtr0331206|FBtr0331207|FBtr0331208|FBtr0331205 302658|302658|302658|302658 305233|305233|305233|303934 2L + 303070 303243 3'utr Pi3K21B FlyBase G697.1 TAGTGTTACAATAGCAATGCTATTATTTCGGCCATCGCCGATTGTGTACATCAGCATATATAGGCTATATATATATATATATATATATCTGTGCATGATTACTTTTTGTGTGTGATGGATGGCGCTGGCAGTTTAACTGCCCTCCGCTATCCCCTCAAGAATTAGACGGCTCCA 173 303178 0.991519902 24 148 1606 0.853658537 1.544068044 0.136585366 0.138728324 0.273170732 173 26 4 175 2L:303070-303243 7 Pi3K21B FBtr0331205|FBtr0331208|FBtr0331207|FBtr0331206 302658|302658|302658|302658 303934|305233|305233|305233 TGTGATG 7mer-m1 dme-miR-11-3p 2L + 303145 303247 3'utr Pi3K21B FlyBase G561.2 TATATATATATATCTGTGCATGATTACTTTTTGTGTGTGATGGATGGCGCTGGCAGTTTAACTGCCCTCCGCTATCCCCTCAAGAATTAGACGGCTCCAGAAA 109 303178 0.919607242 19 89 939 0.826086957 2.181843588 0.179347826 0.486238532 0.695652174 109 32 0 152 2L:303145-303247 7 116.5 560 FBgn0020622 2718.376667 71.30333333 109.6833333 0.04285646 1.633864709 1.06214861 2 2 2 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 2L 303403 303409 + 2L_303403_303409_+ 0.617549436 0.608466074 0.613007755 0.006422863 Pi3K21B FBtr0331206|FBtr0331207|FBtr0331208|FBtr0331205 302658|302658|302658|302658 305233|305233|305233|303934 2L + 303366 303432 3'utr Pi3K21B FlyBase G699.1 AAGATTAATTTTATACAAACATATTTTTTTGTAATACTGCATTTCGCGTGATAATTGATAAGTCGAG 62 303408 0.986161126 9 59 518 0.959459459 1.550228353 0.445945946 0.177419355 0.310810811 62 2 1 71 2L:303366-303432 7 Pi3K21B FBtr0331205|FBtr0331208|FBtr0331207|FBtr0331206 302658|302658|302658|302658 303934|305233|305233|305233 TGCATTT 7mer-m8 dme-miR-277-3p 2L + 303390 303429 3'utr Pi3K21B FlyBase G563.1 TTTTTTGTAATACTGCATTTCGCGTGATAATTGATAAGTC 42 303408 0.721181165 7 42 315 1 1.838849091 0.391304348 0.428571429 0.652173913 42 0 0 69 2L:303390-303429 7 49.5 561 FBgn0020622 2718.376667 71.30333333 109.6833333 0.018209397 0.694217194 0.451299195 -5 -5 -5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2L 303748 303753 + 2L_303748_303753_+ 0.730949444 0.730949445 0.730949444 0 Pi3K21B FBtr0331206|FBtr0331206|FBtr0331206|FBtr0331207|FBtr0331207|FBtr0331207|FBtr0331208|FBtr0331208|FBtr0331208|FBtr0331205|FBtr0331205|FBtr0331205 302658|302658|302658|302658|302658|302658|302658|302658|302658|302658|302658|302658 305233|305233|305233|305233|305233|305233|305233|305233|305233|303934|303934|303934 2L + 303691 303792 3'utr Pi3K21B FlyBase G701.2 GTTATATTATAACTGATTTAAAGTAGTTTTAAGTGAAATCTACGTACGTTTACTCGATGTGATCAGTTGATTGTTGCTAACGTTAATTTTCCTTCAATTTTT 34 303741 0.719943953 16 30 334 0.909090909 1.124938737 0.295454545 0.264705882 0.431818182 34 2 2 40 2L:303691-303792 6 Pi3K21B FBtr0331205|FBtr0331205|FBtr0331205|FBtr0331208|FBtr0331208|FBtr0331208|FBtr0331207|FBtr0331207|FBtr0331207|FBtr0331206|FBtr0331206|FBtr0331206 302658|302658|302658|302658|302658|302658|302658|302658|302658|302658|302658|302658 303934|303934|303934|305233|305233|305233|305233|305233|305233|305233|305233|305233 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 303736 303790 3'utr Pi3K21B FlyBase G568.1 ACGTTTACTCGATGTGATCAGTTGATTGTTGCTAACGTTAATTTTCCTTCAATTT 14 303745 0.989052646 8 13 122 0.9375 1.176091259 0.5 0.142857143 0.25 14 1 0 15 2L:303736-303790 6 17 562 FBgn0020622 2718.376667 71.30333333 109.6833333 0.006253732 0.238418026 0.154991643 7 3 5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2L 304490 304495 + 2L_304490_304495_+ 0.999996806 0.999999993 0.999998399 2.26E-06 Pi3K21B FBtr0331206|FBtr0331207|FBtr0331208 302658|302658|302658 305233|305233|305233 2L + 304332 304626 3'utr Pi3K21B FlyBase G704.1 CTTCGTAAGCGTGTTGAAAGAATGTTGACCTTTCTGTTTGCATTCTCCCTATTGAATTTGAGCGATCCACTTACTAGCACACACAAAAACTGTCGCGTCTTTAAGATATTCTTACATATATAAATTCGATGTATTCATTATACTGTATCTGCATACTTTACCTGTAATTCCTAATTTAACTTATTTAACTTGTAATTTGTGTGTTTCATTTTGCTTAAATTCTATGAGATTTTGGCGGATCTCGTACGTTGTAGTATTTATAAGTTTTAAATTTAGTTTGTAAAATGCGTTTCAA 146 304488 0.989493447 46 141 1371 0.960227273 1.926856709 0.159090909 0.164383562 0.306818182 146 6 1 169 2L:304332-304626 6 Pi3K21B FBtr0331208|FBtr0331207|FBtr0331206 302658|302658|302658 305233|305233|305233 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2L + 304421 304503 3'utr Pi3K21B FlyBase G569.1 CTGTCGCGTCTTTAAGATATTCTTACATATATAAATTCGATGTATTCATTATACTGTATCTGCATACTTTACCTGTAATTCCT 33 304489 0.988718234 10 32 306 0.978723404 1.361727836 0.063829787 0.303030303 0.510638298 33 0 1 46 2L:304421-304503 6 36 563 FBgn0020622 2718.376667 71.30333333 109.6833333 0.013243198 0.504885232 0.328217596 2 1 1.5 0.1 dme-miR-304-5p 7mer-m8 TGAGATT 2L 304556 304562 + 2L_304556_304562_+ 0.620141408 0.569666343 0.594903876 0.035691285 Pi3K21B FBtr0331206|FBtr0331207|FBtr0331208 302658|302658|302658 305233|305233|305233 2L + 304332 304626 3'utr Pi3K21B FlyBase G704.1 CTTCGTAAGCGTGTTGAAAGAATGTTGACCTTTCTGTTTGCATTCTCCCTATTGAATTTGAGCGATCCACTTACTAGCACACACAAAAACTGTCGCGTCTTTAAGATATTCTTACATATATAAATTCGATGTATTCATTATACTGTATCTGCATACTTTACCTGTAATTCCTAATTTAACTTATTTAACTTGTAATTTGTGTGTTTCATTTTGCTTAAATTCTATGAGATTTTGGCGGATCTCGTACGTTGTAGTATTTATAAGTTTTAAATTTAGTTTGTAAAATGCGTTTCAA 146 304563 0.989493447 46 141 1371 0.960227273 1.926856709 0.159090909 0.164383562 0.306818182 146 6 1 169 2L:304332-304626 7 Pi3K21B FBtr0331208|FBtr0331207|FBtr0331206 302658|302658|302658 305233|305233|305233 TGAGATT 7mer-m8 dme-miR-304-5p 2L + 304517 304610 3'utr Pi3K21B FlyBase G570.1 TAACTTGTAATTTGTGTGTTTCATTTTGCTTAAATTCTATGAGATTTTGGCGGATCTCGTACGTTGTAGTATTTATAAGTTTTAAATTTAGTTT 73 304563 0.69179169 20 68 661 0.919191919 1.658011397 0.272727273 0.273972603 0.464646465 73 7 1 91 2L:304517-304610 7 54 564 FBgn0020622 2718.376667 71.30333333 109.6833333 0.019864797 0.757327848 0.492326394 -7 -7 -7 0.1 dme-miR-263a-5p 7mer-A1 TGCCATA 2L 304774 304780 + 2L_304774_304780_+ 0.780906441 0.782901834 0.781904137 0.001410961 Pi3K21B FBtr0331206|FBtr0331207|FBtr0331208 302658|302658|302658 305233|305233|305233 2L + 304745 304810 3'utr Pi3K21B FlyBase G705.2 TGTTTGCTAACTGATAGATGATGACTTTTTGCCATACCTAAATGTTAAATGGAAATATTTGTGAAT 43 304772 0.636625074 15 35 275 0.903846154 1.672097858 0.173076923 0.238095238 0.384615385 42 5 0 47 2L:304745-304810 7 Pi3K21B FBtr0331208|FBtr0331207|FBtr0331206 302658|302658|302658 305233|305233|305233 TGCCATA 7mer-A1 dme-miR-263a-5p 2L + 304736 304779 3'utr Pi3K21B FlyBase G571.1 TGTCAATAATGTTTGCTAACTGATAGATGATGACTTTTTGCCAT 13 304772 0.928410656 5 13 99 1 1.361727836 0.217391304 0.538461538 0.739130435 13 0 0 23 2L:304736-304779 6 13 565 FBgn0020622 2718.376667 71.30333333 109.6833333 0.004782266 0.182319667 0.118523021 2 2 2 0.1 dme-miR-999-3p 8mer-A1 AGTTAACA 2L 3067726 3067733 + 2L_3067726_3067733_+ 0.64386345 0.643537814 0.643700632 0.000230234 CG3523 FBtr0077659|FBtr0335387 3067501|3067501 3068177|3068177 2L + 3067730 3067796 3'utr CG3523 FlyBase G1511.1 AACAGATTGGATTTGCGTCGATCGGATTGAATCTGCCTAACTGCTGTCTTGCAGGGCTGTAGGCTTC 26 3067740 0.797891894 13 22 221 0.833333333 1.096910013 0.366666667 0.153846154 0.266666667 26 4 1 25 2L:3067730-3067796 3 CG3523 FBtr0077659|FBtr0335387 3067501|3067501 3068177|3068177 AGTTAACA 8mer-A1 dme-miR-999-3p 2L + 3067730 3067795 3'utr CG3523 FlyBase G1190.1 AACAGATTGGATTTGCGTCGATCGGATTGAATCTGCCTAACTGCTGTCTTGCAGGGCTGTAGGCTT 17 3067741 0.711409244 10 14 135 0.884615385 1.06069784 0.269230769 0.352941176 0.576923077 17 2 1 23 2L:3067730-3067795 3 7.5 566 FBgn0027571 21016.13 290.6166667 443.8066667 0.000356869 0.025807192 0.01689925 -14 -15 -14.5 0.1 dme-miR-283-5p 7mer-A1 GATATTA 2L 3068149 3068155 + 2L_3068149_3068155_+ 0.782556617 0.782892916 0.782724767 0.0002378 CG3523 FBtr0077659|FBtr0335387 3067501|3067501 3068177|3068177 2L + 3067836 3068167 3'utr CG3523 FlyBase G1512.1 GTTGAAATGATGCAAGATGAGAGGCTCAGTCCATAACACTTAACGCTTTGTGCACCGTACAATTTAGTACCCGACATTCCTTGAGAGCTAGACGGCACCAGACGTCCCAACTTACCAAATATATCTTTTATGCTCTATCTATAATGTATGTCGCATATTCTAGTTTTATTGCCTAGTTGTAAGCCTACAGTTTGTAGTCGCGCATGTAATGAATTTCATTCCTCGAACTAACCCAAGAAAGAGACTACAACATTCGTTATCTCTCTTGATGTATAAAATAATCGCCCAAAAATTATCACTCATGAATATTGTGGATATTAAAATTACACCAT 1637 3068144 0.860889925 74 1526 12254 0.926841834 1.893303327 0.079855744 0.153329261 0.285935085 1637 120 22 1799 2L:3067836-3068167 7 CG3523 FBtr0077659|FBtr0335387 3067501|3067501 3068177|3068177 GATATTA 7mer-A1 dme-miR-283-5p 2L + 3067981 3068167 3'utr CG3523 FlyBase G1191.2 GTATGTCGCATATTCTAGTTTTATTGCCTAGTTGTAAGCCTACAGTTTGTAGTCGCGCATGTAATGAATTTCATTCCTCGAACTAACCCAAGAAAGAGACTACAACATTCGTTATCTCTCTTGATGTATAAAATAATCGCCCAAAAATTATCACTCATGAATATTGTGGATATTAAAATTACACCAT 560 3068144 0.774923827 39 534 4862 0.95377129 1.991226076 0.0243309 0.3625 0.565693431 560 31 7 784 2L:3067981-3068167 7 672 567 FBgn0027571 21016.13 290.6166667 443.8066667 0.03197544 2.312324368 1.514172838 5 5 5 0.1 dme-bantam-3p 6mer3-8 TGATCT 2L 3146647 3146652 - 2L_3146647_3146652_- 0.999999915 1 0.999999957 7.07E-08 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 2L - 3146626 3146721 3'utr Mad FlyBase G7252.1 ACAAGAAAAGATACCAGCGAAATTTAAGAATGGAAAAATGCTACTGAATCAATACGTTTTCCCAGACAATGATCTTTTGTTATCTTAAGTAAAACT 178 3146652 0.950769641 8 175 1917 0.985294118 2.002166062 0.191176471 0.129213483 0.240196078 178 2 1 201 2L:3146626-3146721 6 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 TGATCT 6mer3-8 dme-bantam-3p 2L - 3146580 3146719 3'utr Mad FlyBase G5672.1 AAGAAAAGATACCAGCGAAATTTAAGAATGGAAAAATGCTACTGAATCAATACGTTTTCCCAGACAATGATCTTTTGTTATCTTAAGTAAAACTAATATTGTTTAGACCACGAGAAAATTGCCTTTTTATATAAATATAC 152 3146651 0.999995364 13 148 1524 0.981981982 2.037426498 0.256756757 0.322368421 0.536036036 152 3 1 218 2L:3146580-3146719 6 145.5 568 FBgn0011648 490.6766667 21.49 32.97333333 0.296529283 6.770590973 4.412656692 0 -1 -0.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 2L 3147043 3147048 - 2L_3147043_3147048_- 0.59159449 0.982353442 0.786973966 0.276308268 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 2L - 3146958 3147095 3'utr Mad FlyBase G7254.1 ACAAAATGGTATAACTATTTACAATGATCTACATGCTATAATATTAATGATCTATGCCCATTGGCAAAACAGTTCTTGTTCAAGTCTATTTCAAGTGCTAATTATGTGTCATTGCAAAACTGCTTTAAATATAAAAAC 124 3147071 0.985414107 16 121 1009 0.973856209 2.173186268 0.039215686 0.177419355 0.333333333 124 4 0 149 2L:3146958-3147095 6 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 TGATCT 6mer3-8 dme-bantam-3p 2L - 3147023 3147095 3'utr Mad FlyBase G5674.1 ACAAAATGGTATAACTATTTACAATGATCTACATGCTATAATATTAATGATCTATGCCCATTGGCAAAACAGT 77 3147071 0.837392034 11 72 620 0.936936937 2.017033339 0.045045045 0.337662338 0.540540541 77 7 0 104 2L:3147023-3147095 6 46 569 FBgn0011648 490.6766667 21.49 32.97333333 0.093748089 2.140530479 1.395066721 23 23 23 0.1 dme-bantam-3p 6mer3-8 TGATCT 2L 3147066 3147071 - 2L_3147066_3147071_- 0.761315289 0.545049764 0.653182526 0.152922802 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 2L - 3146958 3147095 3'utr Mad FlyBase G7254.1 ACAAAATGGTATAACTATTTACAATGATCTACATGCTATAATATTAATGATCTATGCCCATTGGCAAAACAGTTCTTGTTCAAGTCTATTTCAAGTGCTAATTATGTGTCATTGCAAAACTGCTTTAAATATAAAAAC 124 3147071 0.985414107 16 121 1009 0.973856209 2.173186268 0.039215686 0.177419355 0.333333333 124 4 0 149 2L:3146958-3147095 6 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 TGATCT 6mer3-8 dme-bantam-3p 2L - 3147023 3147095 3'utr Mad FlyBase G5674.1 ACAAAATGGTATAACTATTTACAATGATCTACATGCTATAATATTAATGATCTATGCCCATTGGCAAAACAGT 77 3147071 0.837392034 11 72 620 0.936936937 2.017033339 0.045045045 0.337662338 0.540540541 77 7 0 104 2L:3147023-3147095 6 45 570 FBgn0011648 490.6766667 21.49 32.97333333 0.091710087 2.093997208 1.364739183 0 0 0 0.1 dme-miR-980-3p 8mer-A1 GGCAGCTA 2L 3147213 3147220 - 2L_3147213_3147220_- 0.668734347 0.668732289 0.668733318 1.41E-06 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 2L - 3147182 3147243 3'utr Mad FlyBase G7255.1 GCAGATTTATATAGATGATGTACGGCAGCTACTCCAATACCCGCCCTTTGCCCATATTTTAT 71 3147227 0.718320133 9 68 366 0.962962963 1.892094603 0.209876543 0.14084507 0.24691358 71 3 0 78 2L:3147182-3147243 8 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 GGCAGCTA 8mer-A1 dme-miR-980-3p 2L - 3147149 3147239 3'utr Mad FlyBase G5675.1 ATTTATATAGATGATGTACGGCAGCTACTCCAATACCCGCCCTTTGCCCATATTTTATAGTTTATCGTATGATTTTCTATGCGAATGTCAT 46 3147227 0.969233548 12 44 259 0.971428571 1.832508913 0.285714286 0.347826087 0.571428571 46 2 0 68 2L:3147149-3147239 8 54 571 FBgn0011648 490.6766667 21.49 32.97333333 0.110052105 2.51279665 1.63768702 7 7 7 0.1 dme-miR-2a-2-5p 7mer-m1 GATGAGG 2L 3147406 3147412 - 2L_3147406_3147412_- 0.818207025 0.824704726 0.821455875 0.004594568 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 2L - 3147378 3147481 stop_codon Mad FlyBase G7257.1 TGGCTGGACAAGGTGCTCACCCAAATGGGCTCTCCGCATAATGCAATTAGTTCGGTATCCTAAGCTTAAGATGAGGCTCGAGTCCTCAATGGAGACGGAAGAGA 24 3147410 0.967203984 9 23 127 0.965517241 1.146128036 0.172413793 0.208333333 0.344827586 24 0 1 28 2L:3147378-3147481 7 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 GATGAGG 7mer-m1 dme-miR-2a-2-5p 2L - 3147351 3147459 stop_codon Mad FlyBase G5677.1 AAATGGGCTCTCCGCATAATGCAATTAGTTCGGTATCCTAAGCTTAAGATGAGGCTCGAGTCCTCAATGGAGACGGAAGAGAAGGAACACAAAACCGGTAGCTAAATGA 19 3147410 0.994928317 8 18 109 0.942857143 1.51851394 0.2 0.578947368 0.771428571 19 2 0 33 2L:3147351-3147459 7 9 572 FBgn0011648 490.6766667 21.49 32.97333333 0.018342017 0.418799442 0.272947837 -2 -2 -2 0.1 dme-miR-307a-3p 6mer3-8 GGTTGT 2L 3168259 3168264 + 2L_3168259_3168264_+ 0.999927691 0.987909581 0.993918636 0.00849808 Hydr2 FBtr0332371|FBtr0077576|FBtr0308315 3168200|3168200|3168200 3168988|3168988|3169462 2L + 3168216 3168275 3'utr Hydr2 FlyBase G1531.1 TTCACACGCATACACGACTATTTAACGCTTCTGTGTCAAAATTGGTTGTCGCTGTCGAAT 30 3168258 0.985161205 8 29 235 0.972222222 1.544068044 0.5 0.133333333 0.277777778 30 1 0 35 2L:3168216-3168275 6 Hydr2 FBtr0308315|FBtr0077576|FBtr0332371 3168200|3168200|3168200 3169462|3168988|3168988 GGTTGT 6mer3-8 dme-miR-307a-3p 2L + 3168222 3168365 3'utr Hydr2 FlyBase G1204.1 CGCATACACGACTATTTAACGCTTCTGTGTCAAAATTGGTTGTCGCTGTCGAATATAAATCTTTGAAGAACCATCGGAACGGAAGAGAGCCCGAAAGACCCCATACATATAGTTCTAACATATGATATCGTTGTGCAGCAATTA 33 3168258 0.980669903 16 32 232 0.94 1.672097858 0.46 0.363636364 0.58 33 3 0 47 2L:3168222-3168365 6 14 573 FBgn0014906 1672.66 89.72666667 137.1866667 0.008369902 0.156029423 0.102050734 1 1 1 0.1 dme-miR-283-5p 6mer3-8 TGATAT 2L 3168344 3168349 + 2L_3168344_3168349_+ 0.937748065 0.807105594 0.87242683 0.092378198 Hydr2 FBtr0332371|FBtr0077576|FBtr0308315 3168200|3168200|3168200 3168988|3168988|3169462 2L + 3168295 3168389 3'utr Hydr2 FlyBase G1532.1 TCGGAACGGAAGAGAGCCCGAAAGACCCCATACATATAGTTCTAACATATGATATCGTTGTGCAGCAATTATAAATTATCAGCCGCGCAAGCATA 19 3168344 0.978478789 10 19 126 1 1.447158031 0.071428571 0.368421053 0.571428571 19 0 0 28 2L:3168295-3168389 6 Hydr2 FBtr0308315|FBtr0077576|FBtr0332371 3168200|3168200|3168200 3169462|3168988|3168988 TGATAT 6mer3-8 dme-miR-283-5p 2L + 3168222 3168365 3'utr Hydr2 FlyBase G1204.1 CGCATACACGACTATTTAACGCTTCTGTGTCAAAATTGGTTGTCGCTGTCGAATATAAATCTTTGAAGAACCATCGGAACGGAAGAGAGCCCGAAAGACCCCATACATATAGTTCTAACATATGATATCGTTGTGCAGCAATTA 33 3168351 0.980669903 16 32 232 0.94 1.672097858 0.46 0.363636364 0.58 33 3 0 47 2L:3168222-3168365 6 13 574 FBgn0014906 1672.66 89.72666667 137.1866667 0.007772052 0.144884464 0.094761396 0 -7 -3.5 0.1 dme-miR-999-3p 7mer-m8 AGTTAAC 2L 3168520 3168526 + 2L_3168520_3168526_+ 0.496031716 0.445583159 0.470807437 0.035672476 Hydr2 FBtr0332371|FBtr0077576|FBtr0308315 3168200|3168200|3168200 3168988|3168988|3169462 2L + 3168484 3168563 3'utr Hydr2 FlyBase G1533.2 AACATACAATGTATCAGTTGAACTCGTACCTTAGTTAGTTAACGCGACCACATGTATCCATGTACTTATGTCTAAGCAAA 91 3168518 0.772219073 15 84 750 0.946902655 1.728353782 0.17699115 0.131868132 0.300884956 91 5 1 107 2L:3168484-3168563 7 Hydr2 FBtr0308315|FBtr0077576|FBtr0332371 3168200|3168200|3168200 3169462|3168988|3168988 AGTTAAC 7mer-m8 dme-miR-999-3p 2L + 3168444 3168561 3'utr Hydr2 FlyBase G1205.1 GAACGATTTTTATGCTTTTTAATGACTTTTTGAAGAGCCAAACATACAATGTATCAGTTGAACTCGTACCTTAGTTAGTTAACGCGACCACATGTATCCATGTACTTATGTCTAAGCA 56 3168517 0.985954201 15 52 438 0.91011236 1.063386979 0.101123596 0.339285714 0.584269663 56 2 6 81 2L:3168444-3168561 7 44.5 575 FBgn0014906 1672.66 89.72666667 137.1866667 0.026604331 0.495950665 0.324375547 2 3 2.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 2L 3359554 3359559 - 2L_3359554_3359559_- 0.999999983 0.999998912 0.999999448 7.78E-07 CG34394 FBtr0332409|FBtr0306333|FBtr0306335|FBtr0112638|FBtr0112641|FBtr0112639 3358638|3358638|3358638|3358638|3358638|3358638 3360717|3360717|3360717|3360717|3360717|3360717 2L - 3359525 3359578 3'utr CG34394 FlyBase G7275.1 GGTAAGAAAAGCGCGTGTATGATCTAAGTAGCTGCATTTTAGTTAGACTAGAGC 13 3359561 0.980829675 6 11 77 0.923076923 1.079181246 0.461538462 0 0 13 1 0 12 2L:3359525-3359578 6 CG34394 FBtr0112638|FBtr0306335|FBtr0306333|FBtr0332409|FBtr0112639|FBtr0112641 3358638|3358638|3358638|3358638|3358638|3358638 3360717|3360717|3360717|3360717|3360717|3360717 TGATCT 6mer3-8 dme-bantam-3p 2L - 3359526 3359586 3'utr CG34394 FlyBase G5688.1 GTTTTAATGGTAAGAAAAGCGCGTGTATGATCTAAGTAGCTGCATTTTAGTTAGACTAGAG 14 3359560 0.717420369 5 13 94 0.941176471 0.903089987 0.294117647 0.214285714 0.352941176 14 0 1 16 2L:3359526-3359586 6 10 576 FBgn0085423 1284.263333 25.49333333 39.12 0.007786565 0.392259414 0.255623722 2 1 1.5 0.1 dme-miR-317-5p 8mer-A1 GTATCCCA 2L 3360255 3360262 - 2L_3360255_3360262_- 0.675380885 0.675380549 0.675380717 2.83E-07 CG34394 FBtr0332409|FBtr0306333|FBtr0306335|FBtr0112638|FBtr0112641|FBtr0112639 3358638|3358638|3358638|3358638|3358638|3358638 3360717|3360717|3360717|3360717|3360717|3360717 2L - 3360240 3360304 3'utr CG34394 FlyBase G7281.2 ATCCTCTGACACTGAATGTTAAGGTTAATGTTGAAAATTCATGTATCCCAATCAAGGTTTAACCT 11 3360246 0.789631528 5 9 69 0.785714286 1.041392685 0.142857143 0.181818182 0.357142857 11 3 0 11 2L:3360240-3360304 8 CG34394 FBtr0112638|FBtr0306335|FBtr0306333|FBtr0332409|FBtr0112639|FBtr0112641 3358638|3358638|3358638|3358638|3358638|3358638 3360717|3360717|3360717|3360717|3360717|3360717 GTATCCCA 8mer-A1 dme-miR-317-5p 2L - 3360239 3360291 3'utr CG34394 FlyBase G5692.1 GAATGTTAAGGTTAATGTTGAAAATTCATGTATCCCAATCAAGGTTTAACCTA 10 3360246 0.977205411 3 9 61 1 1.146128036 0.142857143 0.3 0.5 10 0 0 14 2L:3360239-3360291 8 7 577 FBgn0085423 1284.263333 25.49333333 39.12 0.005450596 0.27458159 0.178936605 -16 -16 -16 0.1 dme-bantam-3p 7mer-m8 TGATCTC 2L 3360367 3360373 - 2L_3360367_3360373_- 0.661615213 0.661615231 0.661615222 0 CG34394 FBtr0332409|FBtr0306333|FBtr0306335|FBtr0112638|FBtr0112641|FBtr0112639 3358638|3358638|3358638|3358638|3358638|3358638 3360717|3360717|3360717|3360717|3360717|3360717 2L - 3360306 3360421 3'utr CG34394 FlyBase G7282.1 AGGTCTGATAGTTTTGAAACGCACTGCACCAGCGGGCATTTGTTACTTTGATCTCCTAGTTAGCAATACACAAAACCCAAACTTGTGCATGTTCTATTCTCTCGGATTAAGATACA 496 3360374 0.807763879 18 476 5025 0.961148649 2.056142262 0.336148649 0.157258065 0.293918919 496 19 4 569 2L:3360306-3360421 7 CG34394 FBtr0112638|FBtr0306335|FBtr0306333|FBtr0332409|FBtr0112639|FBtr0112641 3358638|3358638|3358638|3358638|3358638|3358638 3360717|3360717|3360717|3360717|3360717|3360717 TGATCTC 7mer-m8 dme-bantam-3p 2L - 3360345 3360423 3'utr CG34394 FlyBase G5693.1 AAAGGTCTGATAGTTTTGAAACGCACTGCACCAGCGGGCATTTGTTACTTTGATCTCCTAGTTAGCAATACACAAAACC 266 3360374 0.720383739 16 249 2609 0.938931298 1.721928326 0.361323155 0.342105263 0.554707379 266 18 6 369 2L:3360345-3360423 7 367 578 FBgn0085423 1284.263333 25.49333333 39.12 0.285766938 14.3959205 9.381390593 1 1 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2L 3375997 3376002 - 2L_3375997_3376002_- 0.999111376 0.999132082 0.999121729 1.46E-05 CG9662 FBtr0332407|FBtr0077594 3375830|3375881 3376109|3376109 2L - 3375968 3376043 3'utr CG9662 FlyBase G7293.1 TCGCCAGAAATTCTAGTTTAAAAGGCTTAAAGCTGCGGAATACCAAACAAAAACTTTGATTTCGTTTTAAAATTTT 16 3376003 0.997557214 3 15 62 1 1.278753601 0.105263158 0.125 0.263157895 16 0 0 19 2L:3375968-3376043 6 CG9662 FBtr0332407|FBtr0077594 3375830|3375881 3376109|3376109 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 3375975 3376054 3'utr CG9662 FlyBase G5701.1 CCGAACTGCATTCGCCAGAAATTCTAGTTTAAAAGGCTTAAAGCTGCGGAATACCAAACAAAAACTTTGATTTCGTTTTA 12 3376003 0.961843316 4 12 53 1 1.204119983 0.1875 0.333333333 0.5 12 0 0 16 2L:3375975-3376054 6 9.5 579 FBgn0031529 163.3333333 24.98 37.89333333 0.058163265 0.380304243 0.25070373 1 1 1 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 3405151 3405157 - 2L_3405151_3405157_- 0.658999424 0.658999451 0.658999438 7.07E-08 pgant2 FBtr0077592|FBtr0303992 3404458|3404458 3405576|3405576 2L - 3405145 3405180 3'utr pgant2 FlyBase G7299.1 ACTGTAACCCTAATGCAACCTTTGGCAGCTGATTAA 63 3405158 0.75787803 3 62 395 0.975308642 1.897627091 0.086419753 0.19047619 0.37037037 63 2 0 79 2L:3405145-3405180 7 pgant2 FBtr0077592|FBtr0303992 3404458|3404458 3405576|3405576 GGCAGCT 7mer-m8 dme-miR-980-3p 2L - 3405145 3405181 3'utr pgant2 FlyBase G5706.1 TACTGTAACCCTAATGCAACCTTTGGCAGCTGATTAA 60 3405158 0.740495215 5 59 373 0.978021978 1.949390007 0.131868132 0.366666667 0.582417582 60 2 0 89 2L:3405145-3405181 7 61.5 580 FBgn0031530 60.33333333 2.156666667 3.27 1.019337017 28.51622875 18.80733945 1 1 1 0.1 dme-miR-14-3p 7mer-A1 AGACTGA 2L 3405235 3405241 - 2L_3405235_3405241_- 0.583640228 0.7144517 0.649045964 0.092497699 pgant2 FBtr0077592|FBtr0303992 3404458|3404458 3405576|3405576 2L - 3405214 3405267 3'utr pgant2 FlyBase G7300.1 ATAAAGGGCATACAAAAAACGTACTTAGACTGATTAATTTTTTGTATATGTATA 57 3405243 0.833765255 4 55 503 0.971830986 1.537819095 0.014084507 0.228070175 0.38028169 57 1 1 69 2L:3405214-3405267 7 pgant2 FBtr0077592|FBtr0303992 3404458|3404458 3405576|3405576 AGACTGA 7mer-A1 dme-miR-14-3p 2L - 3405221 3405267 3'utr pgant2 FlyBase G5707.1 ATAAAGGGCATACAAAAAACGTACTTAGACTGATTAATTTTTTGTAT 44 3405243 0.985200751 3 42 347 0.9 1.799340549 0.071428571 0.363636364 0.6 44 7 0 63 2L:3405221-3405267 7 50 581 FBgn0031530 60.33333333 2.156666667 3.27 0.828729282 23.18392581 15.29051988 2 2 2 0.1 dme-miR-277-3p 6mer2-7 GCATTT 2L 3451763 3451768 + 2L_3451763_3451768_+ 0.992978432 0.988795475 0.990886953 0.002957757 Snx1 FBtr0343238|FBtr0077517 3451566|3451566 3452106|3452106 2L + 3451727 3451953 3'utr Snx1 FlyBase G1550.1 CGTATTTTTTGGGAAACTGCTTCCGATTCCTCTCAAGCATTTCGCGATGCATTCACAATGCCTCTATCTCTTTATTCGTACACAGTAATTATTATCAGAAAGCTGAAAGTTTGCTACAGACCCAGGGATCTGCGTATTCTCATTCAAAAATTGTATTCGGTATTATCTAAAACAAAGCCATGGATCTAGTTAGTTAGTTGAAAGTGAAGAAGACTCATTGGCAATTT 84 3451767 0.977545644 26 78 684 0.928571429 1.481920138 0.071428571 0.130952381 0.255102041 84 5 2 91 2L:3451727-3451953 6 Snx1 FBtr0343238|FBtr0077517 3451566|3451566 3452106|3452106 GCATTT 6mer2-7 dme-miR-277-3p 2L + 3451744 3451822 3'utr Snx1 FlyBase G1224.1 TGCTTCCGATTCCTCTCAAGCATTTCGCGATGCATTCACAATGCCTCTATCTCTTTATTCGTACACAGTAATTATTATC 34 3451767 0.985779371 11 33 276 0.960784314 1.69019608 0 0.323529412 0.549019608 34 2 0 49 2L:3451744-3451822 6 26.5 582 FBgn0031534 591 35.52666667 54.49666667 0.044839255 0.745918559 0.486268273 -4 -4 -4 0.1 dme-miR-965-3p 7mer-m8 TACGCTT 2L 3453778 3453784 - 2L_3453778_3453784_- 0.620204839 0.620204854 0.620204847 7.07E-08 Cog3 FBtr0077573 3453695 3453922 2L - 3453757 3453799 3'utr Cog3 FlyBase G7302.1 GTGTTAAAAACTATCTACGCTTTCCAAATGTAGACTTAACATT 14 3453784 0.751685691 4 12 103 0.875 0.84509804 0.375 0.142857143 0.25 14 1 1 14 2L:3453757-3453799 7 Cog3 FBtr0077573 3453695 3453922 TACGCTT 7mer-m8 dme-miR-965-3p 2L - 3453748 3453806 3'utr Cog3 FlyBase G5709.1 AAGATCCGTGTTAAAAACTATCTACGCTTTCCAAATGTAGACTTAACATTAATTTATTT 13 3453784 0.745647707 7 10 101 0.842105263 1.204119983 0.315789474 0.384615385 0.578947368 13 3 0 16 2L:3453748-3453806 7 11 583 FBgn0031536 124 5.03 7.693333333 0.088709677 2.186878728 1.429809359 0 0 0 0.1 dme-miR-8-3p 7mer-m8 CAGTATT 2L 345528 345534 + 2L_345528_345534_+ 0.65664056 0.659381537 0.658011049 0.001938109 Plc21C FBtr0078049|FBtr0078050|FBtr0330674|FBtr0078047|FBtr0330673|FBtr0078048 345447|345447|345447|345447|345447|345447 355566|347927|346255|346255|346255|346541 2L + 345515 345564 3'utr Plc21C FlyBase G717.1 AGTTGTTAGTCTTCAGTATTTACAGCAGAAACATAGGAATGAAAAGTCTT 12 345527 0.994932734 5 11 76 0.933333333 1.146128036 0.2 0.25 0.4 12 1 0 14 2L:345515-345564 7 Plc21C FBtr0330673|FBtr0078048|FBtr0330674|FBtr0078047|FBtr0078049|FBtr0078050 345447|345447|345447|345447|345447|345447 346255|346541|346255|346255|355566|347927 CAGTATT 7mer-m8 dme-miR-8-3p 2L + 345491 345555 3'utr Plc21C FlyBase G579.1 CCCTAGGATTAATTGTGGTTCTAAAGTTGTTAGTCTTCAGTATTTACAGCAGAAACATAGGAATG 9 345526 0.989069386 6 8 50 0.923076923 1.079181246 0.461538462 0.222222222 0.461538462 9 1 0 12 2L:345491-345555 7 7.5 584 FBgn0004611 260.3233333 5.52 8.483333333 0.028810326 1.358695652 0.884086444 1 2 1.5 0.1 dme-miR-307a-3p 7mer-m8 GGTTGTG 2L 346001 346007 + 2L_346001_346007_+ 0.702971731 0.702972035 0.702971883 2.12E-07 Plc21C FBtr0078049|FBtr0078050|FBtr0330674|FBtr0078047|FBtr0330673|FBtr0078048 345447|345447|345447|345447|345447|345447 355566|347927|346255|346255|346255|346541 2L + 345963 346020 3'utr Plc21C FlyBase G719.1 AAGGAGACTGAGTGCTCCATTTGTCTAATGCTAATTGTGGTTGTGTGTATTTTACATC 26 345999 0.991496352 7 26 279 1 1.505149978 0.09375 0.192307692 0.34375 26 0 0 32 2L:345963-346020 7 Plc21C FBtr0330673|FBtr0078048|FBtr0330674|FBtr0078047|FBtr0078049|FBtr0078050 345447|345447|345447|345447|345447|345447 346255|346541|346255|346255|355566|347927 GGTTGTG 7mer-m8 dme-miR-307a-3p 2L + 345983 346022 3'utr Plc21C FlyBase G581.1 TTGTCTAATGCTAATTGTGGTTGTGTGTATTTTACATCAG 16 346001 0.701867721 5 15 177 0.964285714 1.431363764 0.321428571 0.5 0.714285714 16 1 0 27 2L:345983-346022 7 20.5 585 FBgn0004611 260.3233333 5.52 8.483333333 0.078748223 3.713768116 2.416502947 2 0 1 0.1 dme-miR-1006-3p 6mer2-7 GAATTT 2L 3462339 3462344 - 2L_3462339_3462344_- 0.999407807 0.999999644 0.999703725 0.000418466 msl-2 FBtr0077571|FBtr0077570 3462216|3462216 3463265|3463265 2L - 3462260 3462372 3'utr msl-2 FlyBase G7308.1 TGAATAGGCTAAGACTTTTTTTGAGCATGAATTTTTTTGAGCACGTGAACCTAGGATTAAGAACAACAATTCAAGTAAGCCATATATACCCATATTATATATGCGAACATATA 16 3462353 0.988682103 11 13 120 0.863636364 1.278753601 0.090909091 0.25 0.454545455 16 3 0 19 2L:3462260-3462372 6 msl-2 FBtr0077570|FBtr0077571 3462216|3462216 3463265|3463265 GAATTT 6mer2-7 dme-miR-1006-3p 2L - 3462251 3462384 3'utr msl-2 FlyBase G5713.1 AAGACATTTTTTTGAATAGGCTAAGACTTTTTTTGAGCATGAATTTTTTTGAGCACGTGAACCTAGGATTAAGAACAACAATTCAAGTAAGCCATATATACCCATATTATATATGCGAACATATAACTATTAAA 29 3462352 0.985707609 16 28 224 0.923076923 1.556302501 0.256410256 0.275862069 0.461538462 29 3 0 36 2L:3462251-3462384 6 11 586 FBgn0005616 482.6633333 15.65666667 24.13 0.022790213 0.702576112 0.45586407 9 8 8.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 3462415 3462420 - 2L_3462415_3462420_- 0.712588563 0.669529102 0.691058832 0.030447664 msl-2 FBtr0077571|FBtr0077571|FBtr0077571|FBtr0077570|FBtr0077570|FBtr0077570 3462216|3462216|3462216|3462216|3462216|3462216 3463265|3463265|3463265|3463265|3463265|3463265 2L - 3462400 3462446 3'utr msl-2 FlyBase G7309.1 AGATTGCTTTGCCCAAAATGTGGATGCTGTGAGCTAAAAAAAACCTT 15 3462422 0.9208458 6 13 86 0.9375 0.875061263 0.375 0.066666667 0.125 15 0 1 15 2L:3462400-3462446 6 msl-2 FBtr0077570|FBtr0077570|FBtr0077570|FBtr0077571|FBtr0077571|FBtr0077571 3462216|3462216|3462216|3462216|3462216|3462216 3463265|3463265|3463265|3463265|3463265|3463265 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 3462403 3462446 3'utr msl-2 FlyBase G5714.1 AGATTGCTTTGCCCAAAATGTGGATGCTGTGAGCTAAAAAAAAC 10 3462421 0.692380795 4 10 60 1 1.113943352 0.230769231 0.3 0.461538462 10 0 0 13 2L:3462403-3462446 6 12 587 FBgn0005616 482.6633333 15.65666667 24.13 0.02486205 0.766446668 0.497306258 2 1 1.5 0.1 dme-miR-970-3p 6mer3-8 TCTTAT 2L 3463113 3463118 - 2L_3463113_3463118_- 0.999999515 0.999999634 0.999999574 7.07E-08 msl-2 FBtr0077571|FBtr0077570 3462216|3462216 3463265|3463265 2L - 3463090 3463151 3'utr msl-2 FlyBase G7313.1 ATTGCATCCATAACGTGGTATCGTCTTTGATCCTCTTATCATACCCGTTATTCGTAGAGTAA 141 3463124 0.750628951 15 118 1573 0.825301205 1.437750563 0.228915663 0.163120567 0.289156627 141 25 4 137 2L:3463090-3463151 6 msl-2 FBtr0077570|FBtr0077571 3462216|3462216 3463265|3463265 TCTTAT 6mer3-8 dme-miR-970-3p 2L - 3463089 3463149 3'utr msl-2 FlyBase G5717.1 TGCATCCATAACGTGGTATCGTCTTTGATCCTCTTATCATACCCGTTATTCGTAGAGTAAA 105 3463124 0.757283674 12 82 1058 0.781456954 2.071882007 0.145695364 0.342857143 0.543046358 105 33 0 118 2L:3463089-3463149 6 121.5 588 FBgn0005616 482.6633333 15.65666667 24.13 0.251728258 7.760272514 5.03522586 6 6 6 0.1 dme-miR-305-3p 6mer3-8 ATGTGC 2L 3463226 3463231 - 2L_3463226_3463231_- 0.99939251 0.944301048 0.971846779 0.038955573 msl-2 FBtr0077571|FBtr0077570 3462216|3462216 3463265|3463265 2L - 3463200 3463234 3'utr msl-2 FlyBase G7314.1 TTTATGTGCTCAGTGATGTCCAGGTATCAATCCTT 8 3463220 0.834318038 4 8 55 1 1.079181246 0.5 0.375 0.583333333 8 0 0 12 2L:3463200-3463234 6 msl-2 FBtr0077570|FBtr0077571 3462216|3462216 3463265|3463265 ATGTGC 6mer3-8 dme-miR-305-3p 2L - 3463204 3463231 3'utr msl-2 FlyBase G5718.1 ATGTGCTCAGTGATGTCCAGGTATCAAT 6 3463221 0.731764143 2 5 34 1 1 0.3 0.666666667 0.8 6 0 0 10 2L:3463204-3463231 6 7 589 FBgn0005616 482.6633333 15.65666667 24.13 0.014502863 0.44709389 0.290095317 -11 -10 -10.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 3621106 3621111 + 2L_3621106_3621111_+ 0.999999642 0.999998389 0.999999015 8.49E-07 Dot FBtr0339571|FBtr0339571|FBtr0339571|FBtr0077532|FBtr0077532|FBtr0077532 3621072|3621072|3621072|3621072|3621072|3621072 3621573|3621573|3621573|3621171|3621171|3621171 2L + 3621087 3621126 3'utr Dot FlyBase G1591.1 ACGCATGACTTGACAATTTCTGTGACAACAAATATATATA 17 3621104 0.636724767 6 16 116 0.947368421 1.255272505 0 0.117647059 0.210526316 17 1 0 18 2L:3621087-3621126 6 Dot FBtr0339571|FBtr0339571|FBtr0339571|FBtr0077532|FBtr0077532|FBtr0077532 3621072|3621072|3621072|3621072|3621072|3621072 3621573|3621573|3621573|3621171|3621171|3621171 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 3621080 3621128 3'utr Dot FlyBase G1254.1 AAGATTTACGCATGACTTGACAATTTCTGTGACAACAAATATATATATT 12 3621104 0.95693276 5 12 93 1 1.230448921 0 0.333333333 0.529411765 12 0 0 17 2L:3621080-3621128 6 13.5 590 FBgn0015663 146.7833333 8.573333333 13.06 0.091972295 1.574650078 1.033690658 2 2 2 0.1 dme-miR-932-5p 8mer-A1 GGAATTGA 2L 3622414 3622421 - 2L_3622414_3622421_- 0.674982803 0.674975773 0.674979288 4.95E-06 for FBtr0089307|FBtr0089304|FBtr0089310|FBtr0089312|FBtr0089306|FBtr0089308|FBtr0089309|FBtr0100363 3622072|3622072|3622072|3622072|3622072|3622072|3622072|3622072 3622777|3622777|3622777|3622777|3622777|3622777|3622777|3622777 2L - 3622326 3622437 3'utr for FlyBase G7353.1 TGTGTCTAGTTCGCTTGGAATTGATGTAAATTGTAAGTAGGTCTGTGACTCTGTTTCAGAGCTCTGTTAGCCATGTGCATTGTATAAATTCAGCTATTTGTATCTATTAAAT 19 3622422 0.990417228 8 17 176 0.92 1.361727836 0.24 0.210526316 0.4 19 2 0 23 2L:3622326-3622437 8 for FBtr0100363|FBtr0089306|FBtr0089308|FBtr0089309|FBtr0089310|FBtr0089312|FBtr0089307|FBtr0089304 3622072|3622072|3622072|3622072|3622072|3622072|3622072|3622072 3622777|3622777|3622777|3622777|3622777|3622777|3622777|3622777 GGAATTGA 8mer-A1 dme-miR-932-5p 2L - 3622394 3622443 3'utr for FlyBase G5751.1 GATATATGTGTCTAGTTCGCTTGGAATTGATGTAAATTGTAAGTAGGTCT 7 3622422 0.992924074 3 5 69 0.888888889 0.903089987 0.222222222 0.142857143 0.333333333 7 1 0 8 2L:3622394-3622443 8 10 591 FBgn0000721 694.3333333 18.66333333 28.79666667 0.014402304 0.535809966 0.347262415 1 1 1 0.1 dme-bantam-3p 6mer3-8 TGATCT 2L 3622683 3622688 - 2L_3622683_3622688_- 0.999693064 0.999689651 0.999691358 2.40E-06 for FBtr0089307|FBtr0089304|FBtr0089310|FBtr0089312|FBtr0089306|FBtr0089308|FBtr0089309|FBtr0100363|FBtr0301399 3622072|3622072|3622072|3622072|3622072|3622072|3622072|3622072|3622615 3622777|3622777|3622777|3622777|3622777|3622777|3622777|3622777|3622777 2L - 3622657 3622710 5'utr for FlyBase G7355.1 ATGAAAGCCAGGGAAGAAAAATTGATCTTAAGTGCGCCATATGTACGCCAAAGC 111 3622689 0.961736445 4 110 552 0.992 1.792391689 0.24 0.108108108 0.208 111 0 1 124 2L:3622657-3622710 6 for FBtr0100363|FBtr0301399|FBtr0089306|FBtr0089308|FBtr0089309|FBtr0089310|FBtr0089312|FBtr0089307|FBtr0089304 3622072|3622615|3622072|3622072|3622072|3622072|3622072|3622072|3622072 3622777|3622777|3622777|3622777|3622777|3622777|3622777|3622777|3622777 TGATCT 6mer3-8 dme-bantam-3p 2L - 3622654 3622706 5'utr for FlyBase G5752.1 AAGCCAGGGAAGAAAAATTGATCTTAAGTGCGCCATATGTACGCCAAAGCCAA 83 3622689 0.960144891 4 79 388 0.966101695 1.45484486 0.288135593 0.337349398 0.533898305 83 1 3 114 2L:3622654-3622706 6 96 592 FBgn0000721 694.3333333 18.66333333 28.79666667 0.138262122 5.143775674 3.33371918 1 1 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2L 3716579 3716584 + 2L_3716579_3716584_+ 0.991927111 0.99995844 0.995942776 0.005678987 CG2818 FBtr0077537|FBtr0077538 3716507|3716507 3716810|3716810 2L + 3716512 3716596 3'utr CG2818 FlyBase G1599.1 TTGAATATCGGAACTGCTCGACTATTTTATACTCATCTTTATGTACGAAAATAACCGCCCGGCTTGGACCAAAACTCATCAGATT 15 3716576 0.934484325 7 14 61 0.941176471 1.204119983 0.117647059 0.133333333 0.235294118 15 1 0 16 2L:3716512-3716596 6 CG2818 FBtr0077537|FBtr0077538 3716507|3716507 3716810|3716810 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L + 3716556 3716594 3'utr CG2818 FlyBase G1258.1 ACGAAAATAACCGCCCGGCTTGGACCAAAACTCATCAGA 10 3716576 0.590312994 5 9 25 0.933333333 1.146128036 0.066666667 0.4 0.6 10 1 0 14 2L:3716556-3716594 6 10 593 FBgn0031566 211.58 9.483333333 14.51333333 0.047263446 1.054481547 0.689021589 3 3 3 0.1 dme-miR-305-5p 8mer-m1 AGTACAAT 2L 3783588 3783595 + 2L_3783588_3783595_+ 0.570358689 0.570362365 0.570360527 2.62E-06 bowl FBtr0307029|FBtr0077490|FBtr0307027|FBtr0077492|FBtr0077491|FBtr0077493|FBtr0307028 3783283|3783283|3783283|3783283|3783283|3783283|3783283 3784121|3784121|3784121|3784121|3784121|3784121|3784121 2L + 3783564 3783645 3'utr bowl FlyBase G1619.1 TAGATCTACAATTTAATACTTTTTAGTACAATGTCTAGGCAAGGCAATAGACCTAAACTAAGTAATAAAATCAGTTAAGCGA 121 3783586 0.989399388 13 111 1090 0.935714286 1.8162413 0.192857143 0.123966942 0.242857143 121 8 1 131 2L:3783564-3783645 8 bowl FBtr0077491|FBtr0077493|FBtr0307028|FBtr0307029|FBtr0077490|FBtr0307027|FBtr0077492 3783283|3783283|3783283|3783283|3783283|3783283|3783283 3784121|3784121|3784121|3784121|3784121|3784121|3784121 AGTACAAT 8mer-m1 dme-miR-305-5p 2L + 3783538 3783704 3'utr bowl FlyBase G1283.1 GACCCACAAGTACATTAAAATAAATTTAGATCTACAATTTAATACTTTTTAGTACAATGTCTAGGCAAGGCAATAGACCTAAACTAAGTAATAAAATCAGTTAAGCGATAATTGTAAGCGAAACAAACTCCGTTGTTGCATTTTATAGAGCTCTTATGCGTTAGGAT 171 3783586 0.834758409 17 161 1556 0.937743191 1.603865792 0.155642023 0.385964912 0.591439689 171 11 5 241 2L:3783538-3783704 8 92.5 594 FBgn0004893 346.31 11.79 17.92333333 0.26710173 7.845631891 5.160870374 2 2 2 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 2L 3783674 3783680 + 2L_3783674_3783680_+ 0.620203335 0.620202662 0.620202998 4.24E-07 bowl FBtr0307029|FBtr0077490|FBtr0307027|FBtr0077492|FBtr0077491|FBtr0077493|FBtr0307028 3783283|3783283|3783283|3783283|3783283|3783283|3783283 3784121|3784121|3784121|3784121|3784121|3784121|3784121 2L + 3783646 3783859 3'utr bowl FlyBase G1619.2 TAATTGTAAGCGAAACAAACTCCGTTGTTGCATTTTATAGAGCTCTTATGCGTTAGGATTTTAGCTTAAATCTACCGATTTAAATGTTTAAGCCTTTAGTACGAGAGTCTATCGATTAGTTTTTAATGTGTGGCCCAACACTAAGTGTTGCTGTTTGCTGAGTGAATTCCAATTTTTTATTTATGTTTCCTTATCCGGTAAGCTAATCTTAATG 182 3783673 0.98939516 33 169 1736 0.925925926 1.698970004 0.162037037 0.159340659 0.291666667 182 13 3 200 2L:3783646-3783859 7 bowl FBtr0077491|FBtr0077493|FBtr0307028|FBtr0307029|FBtr0077490|FBtr0307027|FBtr0077492 3783283|3783283|3783283|3783283|3783283|3783283|3783283 3784121|3784121|3784121|3784121|3784121|3784121|3784121 TGCATTT 7mer-m8 dme-miR-277-3p 2L + 3783538 3783704 3'utr bowl FlyBase G1283.1 GACCCACAAGTACATTAAAATAAATTTAGATCTACAATTTAATACTTTTTAGTACAATGTCTAGGCAAGGCAATAGACCTAAACTAAGTAATAAAATCAGTTAAGCGATAATTGTAAGCGAAACAAACTCCGTTGTTGCATTTTATAGAGCTCTTATGCGTTAGGAT 171 3783673 0.834758409 17 161 1556 0.937743191 1.603865792 0.155642023 0.385964912 0.591439689 171 11 5 241 2L:3783538-3783704 7 102.5 595 FBgn0004893 346.31 11.79 17.92333333 0.295977592 8.693808312 5.718802306 1 1 1 0.1 dme-miR-7-5p 7mer-m8 GTCTTCC 2L 3784044 3784050 + 2L_3784044_3784050_+ 0.705950312 0.705950304 0.705950308 0 bowl FBtr0307029|FBtr0077490|FBtr0307027|FBtr0077492|FBtr0077491|FBtr0077493|FBtr0307028 3783283|3783283|3783283|3783283|3783283|3783283|3783283 3784121|3784121|3784121|3784121|3784121|3784121|3784121 2L + 3784018 3784101 3'utr bowl FlyBase G1620.1 ATATAAGCAACCCATAGAATTCCATGGTCTTCCTTCAATTTTAAATGATTTTATTCAAACCATAGCGAGTTAGTTGATTTCAAA 138 3784042 0.773076778 12 130 1064 0.947368421 1.364416975 0 0.195652174 0.350877193 138 3 6 162 2L:3784018-3784101 7 bowl FBtr0077491|FBtr0077493|FBtr0307028|FBtr0307029|FBtr0077490|FBtr0307027|FBtr0077492 3783283|3783283|3783283|3783283|3783283|3783283|3783283 3784121|3784121|3784121|3784121|3784121|3784121|3784121 GTCTTCC 7mer-m8 dme-miR-7-5p 2L + 3784016 3784103 3'utr bowl FlyBase G1286.1 TAATATAAGCAACCCATAGAATTCCATGGTCTTCCTTCAATTTTAAATGATTTTATTCAAACCATAGCGAGTTAGTTGATTTCAAATA 119 3784042 0.783192276 12 118 966 0.994444444 2.252853031 0.016666667 0.411764706 0.611111111 119 1 0 179 2L:3784016-3784103 7 119.5 596 FBgn0004893 346.31 11.79 17.92333333 0.345066559 10.13570823 6.667286591 2 2 2 0.1 dme-miR-283-5p 7mer-A1 GATATTA 2L 408978 408984 - 2L_408978_408984_- 0.78267595 0.782887022 0.782781486 0.0001492 AP-2alpha FBtr0089489|FBtr0089488 408874|408028 409387|409387 2L - 408959 409019 3'utr AP-2alpha FlyBase G6532.1 TATATTGTTGCATCATTTCGAGGCAGTAGCAATTGGATATTATATACCTATATACAGATCT 25 408987 0.832907339 7 21 188 0.892857143 1.397940009 0.214285714 0.12 0.214285714 25 3 0 25 2L:408959-409019 7 AP-2alpha FBtr0089488|FBtr0089489 408028|408874 409387|409387 GATATTA 7mer-A1 dme-miR-283-5p 2L - 408961 408999 3'utr AP-2alpha FlyBase G5105.1 AGGCAGTAGCAATTGGATATTATATACCTATATACAGAT 5 408979 0.996005565 2 2 31 0.461538462 0.77815125 0 0.8 0.923076923 5 7 0 6 2L:408961-408999 7 8.5 597 FBgn0264855 2009.92 51.58333333 79.16333333 0.004229024 0.164781906 0.107372942 3 -5 -1 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 409213 409218 - 2L_409213_409218_- 0.742679816 0.999997245 0.871338531 0.181950878 AP-2alpha FBtr0089489|FBtr0089488 408874|408028 409387|409387 2L - 409103 409232 3'utr AP-2alpha FlyBase G6533.1 TACACTCTTCTTAAGTACCTTTCATCTTCTCCAACAGCGAGTTGATTTACCCACTGTCCTGTTTATTTGAATATTATGTTTGTAAACCTACTCTTACTTTAACCATTTTCAATTTCATGTTCCCAAACTT 37 409211 0.974841541 14 33 346 0.933333333 1.62324929 0.022222222 0.162162162 0.311111111 37 3 0 42 2L:409103-409232 6 AP-2alpha FBtr0089488|FBtr0089489 408028|408874 409387|409387 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L - 409168 409274 3'utr AP-2alpha FlyBase G5106.2 GGCCCTAGAACTGTACGCGTTTAGTTATGCCAGGCACACTCCTACACTCTTCTTAAGTACCTTTCATCTTCTCCAACAGCGAGTTGATTTACCCACTGTCCTGTTTA 12 409211 0.988852438 6 9 94 0.933333333 1.146128036 0.066666667 0.25 0.4 12 1 0 14 2L:409168-409274 6 11.5 598 FBgn0264855 2009.92 51.58333333 79.16333333 0.005721621 0.222940226 0.145269274 -7 -7 -7 0.1 dme-miR-965-3p 7mer-A1 ACGCTTA 2L 417675 417681 + 2L_417675_417681_+ 0.538776053 0.807726713 0.673251383 0.190176793 ebi FBtr0078055 417633 418536 2L + 417619 417703 stop_codon ebi FlyBase G751.1 CCTGCGAAAGTTCTGATTGCCGGAGCAGCCACAACTGGATTTCGTGTATTGAGCCAACGCTTAAAATAGTCAAGATTCCTTTTCC 15 417667 0.970188174 7 15 85 1 1.322219295 0.142857143 0.266666667 0.476190476 15 0 0 21 2L:417619-417703 7 ebi FBtr0078055 417633 418536 ACGCTTA 7mer-A1 dme-miR-965-3p 2L + 417645 417683 3'utr ebi FlyBase G602.1 AGCCACAACTGGATTTCGTGTATTGAGCCAACGCTTAAA 11 417667 0.757518519 4 11 73 1 1.204119983 0 0.363636364 0.5625 11 0 0 16 2L:417645-417683 7 8.5 599 FBgn0263933 724.51 26.33666667 40.32333333 0.011732067 0.322743956 0.210796065 8 8 8 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA 2L 417785 417792 + 2L_417785_417792_+ 0.625360626 0.625361342 0.625360984 4.95E-07 ebi FBtr0078055 417633 418536 2L + 417764 417810 3'utr ebi FlyBase G752.1 TTTTACTTTTGATTCAAAAATTGCATTTAACTATATTTTTTAAAGAA 78 417784 0.876237012 2 76 713 0.989130435 1.658011397 0 0.153846154 0.282608696 78 0 1 91 2L:417764-417810 8 ebi FBtr0078055 417633 418536 TGCATTTA 8mer-A1 dme-miR-277-3p 2L + 417765 417813 3'utr ebi FlyBase G603.1 TTTACTTTTGATTCAAAAATTGCATTTAACTATATTTTTTAAAGAAGTG 50 417784 0.867074054 3 49 428 0.97260274 1.851258349 0.02739726 0.44 0.616438356 50 2 0 71 2L:417765-417813 8 63 600 FBgn0263933 724.51 26.33666667 40.32333333 0.086955322 2.392102266 1.562370836 1 1 1 0.1 dme-miR-317-5p 6mer2-7 TATCCC 2L 417893 417898 + 2L_417893_417898_+ 0.864121325 0.956126203 0.910123764 0.065057289 ebi FBtr0078055 417633 418536 2L + 417845 418008 3'utr ebi FlyBase G753.1 AGTCGATTTGGATCTGGAGTCCGGACCTTAGGTAACTCCTTTCTTAGCTATCCCGCCCTGCAATCGTATTTGTAATTGCTTTAAATTCTAATTAGTTCTTTAAGGTATACCTCTTGAGATGAGATCCTCCCGCTTTTGTCCACGTCTATTTCGTACGCTTAGTT 76 417895 0.823181114 19 74 560 0.977272727 1.934498451 0.068181818 0.131578947 0.25 76 2 0 86 2L:417845-418008 6 ebi FBtr0078055 417633 418536 TATCCC 6mer2-7 dme-miR-317-5p 2L + 417841 417912 3'utr ebi FlyBase G604.1 CATAAGTCGATTTGGATCTGGAGTCCGGACCTTAGGTAACTCCTTTCTTAGCTATCCCGCCCTGCAATCGTA 35 417895 0.773981067 12 34 234 1 1.681241237 0.145833333 0.371428571 0.541666667 35 0 0 48 2L:417841-417912 6 39 601 FBgn0263933 724.51 26.33666667 40.32333333 0.053829485 1.480825212 0.967181946 -2 -2 -2 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 2L 418174 418180 + 2L_418174_418180_+ 0.619028658 0.619405217 0.619216937 0.000266226 ebi FBtr0078055 417633 418536 2L + 418153 418230 3'utr ebi FlyBase G755.1 GAAAATCGTTTAGTATAACTTTGCATTTTGTTATTGTATCGATCAAAGATGCCAGCCAACTCCCCGCCCTCCCCACCA 33 418202 0.968361584 4 29 182 0.923076923 1.255272505 0.025641026 0.151515152 0.282051282 33 2 1 36 2L:418153-418230 7 ebi FBtr0078055 417633 418536 TGCATTT 7mer-m8 dme-miR-277-3p 2L + 418164 418227 3'utr ebi FlyBase G608.1 AGTATAACTTTGCATTTTGTTATTGTATCGATCAAAGATGCCAGCCAACTCCCCGCCCTCCCCA 11 418202 0.994714044 2 11 67 1 1.176091259 0 0.363636364 0.533333333 11 0 0 15 2L:418164-418227 7 8 602 FBgn0263933 724.51 26.33666667 40.32333333 0.011041946 0.303759018 0.198396297 -28 -28 -28 0.1 dme-miR-283-5p 6mer3-8 TGATAT 2L 4345260 4345265 + 2L_4345260_4345265_+ 0.999995493 0.99999813 0.999996811 1.84E-06 Atet FBtr0112898|FBtr0077426|FBtr0112899|FBtr0077427 4344479|4344479|4344479|4344479 4345776|4345411|4345776|4345411 2L + 4345233 4345272 3'utr Atet FlyBase G1645.1 ATCGGAGAAGGGAACCTGGCCAACTGGTGATATAAAGCAA 35 4345257 0.940023133 3 34 137 0.972222222 1.544068044 0.388888889 0.028571429 0.055555556 35 1 0 35 2L:4345233-4345272 6 Atet FBtr0112898|FBtr0077426|FBtr0112899|FBtr0077427 4344479|4344479|4344479|4344479 4345776|4345411|4345776|4345411 TGATAT 6mer3-8 dme-miR-283-5p 2L + 4345233 4345270 3'utr Atet FlyBase G1303.1 ATCGGAGAAGGGAACCTGGCCAACTGGTGATATAAAGC 17 4345257 0.774797544 4 17 62 1 1.431363764 0.037037037 0.470588235 0.666666667 17 0 0 27 2L:4345233-4345270 6 25 603 FBgn0020762 413.91 11.67333333 17.79666667 0.060399604 2.141633352 1.404757445 3 3 3 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 2L 4345324 4345330 + 2L_4345324_4345330_+ 0.521223829 0.52122382 0.521223824 0 Atet FBtr0112898|FBtr0077426|FBtr0112899|FBtr0077427 4344479|4344479|4344479|4344479 4345776|4345411|4345776|4345411 2L + 4345274 4345349 3'utr Atet FlyBase G1646.1 TACTATTTTTACGATGGGATGCAATCGGATTTGTGTTAGCTGCGCGTATTTGTGATTATTACATTTTAATTTAGTA 254 4345323 0.973262597 18 247 2579 0.973684211 1.86923172 0.006578947 0.177165354 0.3125 254 5 3 296 2L:4345274-4345349 7 Atet FBtr0112898|FBtr0077426|FBtr0112899|FBtr0077427 4344479|4344479|4344479|4344479 4345776|4345411|4345776|4345411 TGTGATT 7mer-m1 dme-miR-308-3p 2L + 4345271 4345348 3'utr Atet FlyBase G1304.1 AATTACTATTTTTACGATGGGATGCAATCGGATTTGTGTTAGCTGCGCGTATTTGTGATTATTACATTTTAATTTAGT 164 4345323 0.796964753 19 152 1701 0.926829268 1.316542162 0.040650407 0.353658537 0.569105691 164 8 10 228 2L:4345271-4345348 7 196 604 FBgn0020762 413.91 11.67333333 17.79666667 0.473532894 16.79040548 11.01329837 1 1 1 0.1 dme-miR-980-3p 6mer3-8 GGCAGC 2L 4345435 4345440 + 2L_4345435_4345440_+ 0.999996976 0.999996924 0.99999695 7.07E-08 Atet FBtr0112898|FBtr0112899 4344479|4344479 4345776|4345776 2L + 4345413 4345453 3'utr Atet FlyBase G1647.1 AACAGCACGCTCTCCTTCCTTCGGCAGCCACACCCAAAGTA 15 4345433 0.960407463 2 15 75 1 1.278753601 0.105263158 0.2 0.368421053 15 0 0 19 2L:4345413-4345453 6 Atet FBtr0112898|FBtr0112899 4344479|4344479 4345776|4345776 GGCAGC 6mer3-8 dme-miR-980-3p 2L + 4345416 4345453 3'utr Atet FlyBase G1306.1 AGCACGCTCTCCTTCCTTCGGCAGCCACACCCAAAGTA 7 4345433 0.904276849 2 6 31 0.833333333 1 0 0.571428571 0.75 7 2 0 10 2L:4345416-4345453 6 11 605 FBgn0020762 413.91 11.67333333 17.79666667 0.026575826 0.942318675 0.618093276 2 2 2 0.1 dme-miR-986-5p 6mer3-8 ATTCGA 2L 4382994 4382999 - 2L_4382994_4382999_- 0.999935969 0.999034251 0.99948511 0.000637598 CG3338 FBtr0077462 4382923 4383136 2L - 4382956 4383048 3'utr CG3338 FlyBase G7439.1 AGGTCTATCCGGTTTATATGGTTGGTATGTTTTAAGACAGCTATGGAACATTCGATTTTGTATTATTCGCAATCCATCCGCCTATTTTAAATA 14 4382983 0.987462135 9 13 123 1 1.322219295 0.142857143 0.428571429 0.619047619 14 0 0 21 2L:4382956-4383048 6 CG3338 FBtr0077462 4382923 4383136 ATTCGA 6mer3-8 dme-miR-986-5p 2L - 4382961 4382999 3'utr CG3338 FlyBase G5811.1 ATTCGATTTTGTATTATTCGCAATCCATCCGCCTATTTT 8 4382992 0.954036074 5 8 71 1 0.903089987 0.5 0 0 8 0 0 8 2L:4382961-4382999 6 5.5 606 FBgn0031598 254.6666667 10.37 15.86333333 0.021596859 0.530376085 0.346711494 -16 -7 -11.5 0.1 dme-miR-277-3p 6mer2-7 GCATTT 2L 4399866 4399871 + 2L_4399866_4399871_+ 0.999999999 1 0.999999999 0 l(2)k05819 FBtr0331447|FBtr0305968|FBtr0077432 4399732|4399732|4399732 4400487|4400105|4400105 2L + 4399852 4399882 3'utr l(2)k05819 FlyBase G1665.1 AGTTGTTTCTGTCAGCATTTGTTCTTAGGTG 5 4399871 0.717877533 4 5 50 1 0.698970004 0.2 0 0 5 0 0 5 2L:4399852-4399882 6 l(2)k05819 FBtr0305968|FBtr0331447|FBtr0077432 4399732|4399732|4399732 4400105|4400487|4400105 GCATTT 6mer2-7 dme-miR-277-3p 2L + 4399831 4399877 3'utr l(2)k05819 FlyBase G1323.1 AGTCTGGGTATCCTTAGACGAAGTTGTTTCTGTCAGCATTTGTTCTT 5 4399862 0.991013988 4 5 53 1 0.903089987 0.125 0.4 0.625 5 0 0 8 2L:4399831-4399877 6 4.5 607 FBgn0022153 937.2133333 22.65666667 34.38 0.004801468 0.198617037 0.130890052 -5 4 -0.5 0.1 dme-miR-184-5p 6mer3-8 TGATAA 2L 4446696 4446701 - 2L_4446696_4446701_- 0.99999667 0.999997133 0.999996902 2.83E-07 MFS18 FBtr0077456 4446668 4446987 2L - 4446687 4446752 3'utr MFS18 FlyBase G7461.1 TATATATTTAAGAGAGTAGTTTTAAGTAGCGAAATCTTACTGCTCCTAGCGTGATAAAATACAAAT 36 4446707 0.982377547 8 32 242 0.897959184 1.342422681 0.163265306 0.25 0.448979592 36 4 1 44 2L:4446687-4446752 6 MFS18 FBtr0077456 4446668 4446987 TGATAA 6mer3-8 dme-miR-184-5p 2L - 4446677 4446743 3'utr MFS18 FlyBase G5821.1 AAGAGAGTAGTTTTAAGTAGCGAAATCTTACTGCTCCTAGCGTGATAAAATACAAATATTTAATCCT 24 4446706 0.818101911 7 21 169 0.875 0.970036777 0.21875 0.291666667 0.46875 24 2 2 28 2L:4446677-4446743 6 24.5 608 FBgn0025684 397.49 26.06 39.8 0.061636771 0.940138143 0.615577889 6 5 5.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 4446791 4446796 - 2L_4446791_4446796_- 0.729587452 0.721623715 0.725605583 0.005631257 MFS18 FBtr0077456|FBtr0077456|FBtr0077456 4446668|4446668|4446668 4446987|4446987|4446987 2L - 4446756 4446929 3'utr MFS18 FlyBase G7462.1 TTGGAGTGGATCGATTTATGTTCATGCTGCTTATATTATTTAGTATACACGTTTATGATTGACGATCATTTAGTTGTTCTTGTGAGATGTTAAAGCCAAAAAATATGTGGTATCATTGATACTTTAAAGGACCCTGTGAGTTTTAGCCAATAAATCGATTCATTCTATATATTA 33 4446788 0.987130868 17 32 312 0.975 1.591064607 0.1 0.151515152 0.3 33 1 0 39 2L:4446756-4446929 6 MFS18 FBtr0077456|FBtr0077456|FBtr0077456 4446668|4446668|4446668 4446987|4446987|4446987 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 4446761 4446864 3'utr MFS18 FlyBase G5822.1 TCATTTAGTTGTTCTTGTGAGATGTTAAAGCCAAAAAATATGTGGTATCATTGATACTTTAAAGGACCCTGTGAGTTTTAGCCAATAAATCGATTCATTCTATA 19 4446788 0.982603553 9 18 143 0.961538462 1.397940009 0.230769231 0.263157895 0.461538462 19 1 0 25 2L:4446761-4446864 6 13 609 FBgn0025684 397.49 26.06 39.8 0.032705225 0.49884881 0.326633166 -8 -8 -8 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 2L 4461630 4461635 + 2L_4461630_4461635_+ 0.999999932 0.999999994 0.999999963 7.07E-08 CG15435 FBtr0077441|FBtr0345632 4461558|4461558 4461746|4461746 2L + 4461612 4461645 3'utr CG15435 FlyBase G1682.1 TGTTGACCACTTTGCATCTGTGTTTTTGTCGTAT 13 4461628 0.793264365 3 11 146 0.882352941 1.176091259 0.294117647 0.307692308 0.470588235 13 2 0 15 2L:4461612-4461645 6 CG15435 FBtr0345632|FBtr0077441 4461558|4461558 4461746|4461746 TGTGTT 6mer3-8 dme-miR-317-3p 2L + 4461611 4461648 3'utr CG15435 FlyBase G1333.1 ATGTTGACCACTTTGCATCTGTGTTTTTGTCGTATTGT 9 4461628 0.753238236 4 8 95 0.923076923 1.079181246 0.153846154 0.333333333 0.538461538 9 1 0 12 2L:4461611-4461648 6 10 610 FBgn0031608 120.9866667 8.103333333 12.34333333 0.082653736 1.234060058 0.810153929 2 2 2 0.1 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 447725 447732 + 2L_447725_447732_+ 0.459266021 0.631115711 0.545190866 0.121516088 ex FBtr0329832|FBtr0078059 447248|447248 448701|448701 2L + 447696 447761 3'utr ex FlyBase G791.1 AAATACACATTCAAATAATCAGAACCCAGTCTAGTCACTTAAGGGAATTGGTAACGTAACCACAGC 33 447734 0.657979396 9 31 162 0.906976744 0.892094603 0.046511628 0.181818182 0.372093023 33 0 4 39 2L:447696-447761 8 ex FBtr0329832|FBtr0078059 447248|447248 448701|448701 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L + 447691 447744 3'utr ex FlyBase G632.1 CCTCAAAATACACATTCAAATAATCAGAACCCAGTCTAGTCACTTAAGGGAATT 31 447725 0.959012801 6 29 140 0.95 1.278753601 0.025 0.258064516 0.425 31 1 1 38 2L:447691-447744 8 29 611 FBgn0004583 1742.906667 31.79333333 48.95666667 0.016638871 0.91214091 0.592360591 -9 0 -4.5 0.1 dme-miR-968-5p 7mer-m8 ACTACTT 2L 4478001 4478007 - 2L_4478001_4478007_- 0.60738292 0.613912034 0.610647477 0.004616771 dp FBtr0332354|FBtr0332350|FBtr0332348|FBtr0332349|FBtr0332352|FBtr0332345|FBtr0305142|FBtr0332351 4477460|4477460|4477460|4477460|4477460|4477460|4477460|4477460 4479537|4479537|4479537|4479537|4479537|4479537|4479537|4479537 2L - 4477973 4478033 3'utr dp FlyBase G7506.1 ATTAAACGTAAACAAAATGTATAGTCACTACTTTAAGAAGAAAGAGAAATTTTCTTTATAG 15 4478015 0.902368574 4 13 112 0.894736842 0.929418926 0.105263158 0.2 0.368421053 15 1 1 17 2L:4477973-4478033 7 dp FBtr0332348|FBtr0332352|FBtr0305142|FBtr0332351|FBtr0332349|FBtr0332354|FBtr0332345|FBtr0332350 4477460|4477460|4477460|4477460|4477460|4477460|4477460|4477460 4479537|4479537|4479537|4479537|4479537|4479537|4479537|4479537 ACTACTT 7mer-m8 dme-miR-968-5p 2L - 4477993 4478030 3'utr dp FlyBase G5849.1 AAACGTAAACAAAATGTATAGTCACTACTTTAAGAAGA 14 4478015 0.815687082 4 14 101 1 1.301029996 0.05 0.285714286 0.5 14 0 0 20 2L:4477993-4478030 7 13 612 FBgn0053196 31 0.07 0.11 0.419354839 185.7142857 118.1818182 8 8 8 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 2L 4478340 4478346 - 2L_4478340_4478346_- 0.504907012 0.484011842 0.494459427 0.014775138 dp FBtr0332354|FBtr0332350|FBtr0332348|FBtr0332349|FBtr0332352|FBtr0332345|FBtr0305142|FBtr0332351 4477460|4477460|4477460|4477460|4477460|4477460|4477460|4477460 4479537|4479537|4479537|4479537|4479537|4479537|4479537|4479537 2L - 4478307 4478383 3'utr dp FlyBase G7507.1 ATTTTTGTAGTTTTATAGTCAATTAATATTAAATTGTTGTGATTGTTTTTAATGCAAAAGAGATACTTCCACTAACT 30 4478340 0.992832346 8 29 344 0.973684211 1.568201724 0.184210526 0.2 0.368421053 30 1 0 37 2L:4478307-4478383 7 dp FBtr0332348|FBtr0332352|FBtr0305142|FBtr0332351|FBtr0332349|FBtr0332354|FBtr0332345|FBtr0332350 4477460|4477460|4477460|4477460|4477460|4477460|4477460|4477460 4479537|4479537|4479537|4479537|4479537|4479537|4479537|4479537 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 4478320 4478375 3'utr dp FlyBase G5850.1 AGTTTTATAGTCAATTAATATTAAATTGTTGTGATTGTTTTTAATGCAAAAGAGAT 25 4478340 0.883336653 8 25 286 1 1.544068044 0.114285714 0.32 0.514285714 25 0 0 35 2L:4478320-4478375 7 23.5 613 FBgn0053196 31 0.07 0.11 0.758064516 335.7142857 213.6363636 -6 -6 -6 0.1 dme-miR-34-5p 7mer-A1 ACTGCCA 2L 4478549 4478555 - 2L_4478549_4478555_- 0.823349507 0.823349562 0.823349535 7.07E-08 dp FBtr0332354|FBtr0332350|FBtr0332348|FBtr0332349|FBtr0332352|FBtr0332345|FBtr0305142|FBtr0332351 4477460|4477460|4477460|4477460|4477460|4477460|4477460|4477460 4479537|4479537|4479537|4479537|4479537|4479537|4479537|4479537 2L - 4478534 4478579 3'utr dp FlyBase G7509.1 AATCGTTGAGGGAACATAACTATAACTGCCACTGAGGCGTCATCAG 7 4478557 0.96277779 4 7 37 1 0.954242509 0.222222222 0.285714286 0.444444444 7 0 0 9 2L:4478534-4478579 7 dp FBtr0332348|FBtr0332352|FBtr0305142|FBtr0332351|FBtr0332349|FBtr0332354|FBtr0332345|FBtr0332350 4477460|4477460|4477460|4477460|4477460|4477460|4477460|4477460 4479537|4479537|4479537|4479537|4479537|4479537|4479537|4479537 ACTGCCA 7mer-A1 dme-miR-34-5p 2L - 4478528 4478572 3'utr dp FlyBase G5852.1 GAGGGAACATAACTATAACTGCCACTGAGGCGTCATCAGCGCACA 12 4478557 0.71301643 2 10 55 0.928571429 1.113943352 0.642857143 0.166666667 0.285714286 12 1 0 13 2L:4478528-4478572 7 9 614 FBgn0053196 31 0.07 0.11 0.290322581 128.5714286 81.81818182 2 2 2 0.1 dme-miR-968-5p 7mer-m8 ACTACTT 2L 447935 447941 + 2L_447935_447941_+ 0.62174001 0.621650437 0.621695224 6.34E-05 ex FBtr0329832|FBtr0078059 447248|447248 448701|448701 2L + 447898 447979 3'utr ex FlyBase G792.2 TACTTAGTTAGGCCAGAAATGCGAATACTTAAAACTAACTACTTCCGCCCAAACAACTGTGATTGATTTTTATTTAAACTTA 2898 447940 0.9175729 20 2867 12252 0.990640953 2.543198586 0.033465683 0.178743961 0.32501418 2898 24 9 3493 2L:447898-447979 7 ex FBtr0329832|FBtr0078059 447248|447248 448701|448701 ACTACTT 7mer-m8 dme-miR-968-5p 2L + 447895 447978 3'utr ex FlyBase G634.1 AAATACTTAGTTAGGCCAGAAATGCGAATACTTAAAACTAACTACTTCCGCCCAAACAACTGTGATTGATTTTTATTTAAACTT 1793 447940 0.847468128 16 1743 7292 0.97739066 2.46686762 0.026315789 0.357501394 0.57301705 1793 53 8 2637 2L:447895-447978 7 2137 615 FBgn0004583 1742.906667 31.79333333 48.95666667 1.226112701 67.21534913 43.65084769 -5 -5 -5 0.1 dme-miR-980-5p 6mer3-8 GAAAAA 2L 4479454 4479459 - 2L_4479454_4479459_- 0.844452644 0.708283873 0.776368259 0.096285811 dp FBtr0332354|FBtr0332350|FBtr0332348|FBtr0332349|FBtr0332352|FBtr0332345|FBtr0305142|FBtr0332351 4477460|4477460|4477460|4477460|4477460|4477460|4477460|4477460 4479537|4479537|4479537|4479537|4479537|4479537|4479537|4479537 2L - 4479434 4479465 3'utr dp FlyBase G7512.1 GAAAAAGAAAAAATTGTGAATATTTGAAAGGC 12 4479452 0.966147962 3 12 68 1 1.204119983 0.375 0.333333333 0.5 12 0 0 16 2L:4479434-4479465 6 dp FBtr0332348|FBtr0332352|FBtr0305142|FBtr0332351|FBtr0332349|FBtr0332354|FBtr0332345|FBtr0332350 4477460|4477460|4477460|4477460|4477460|4477460|4477460|4477460 4479537|4479537|4479537|4479537|4479537|4479537|4479537|4479537 GAAAAA 6mer3-8 dme-miR-980-5p 2L - 4479434 4479465 3'utr dp FlyBase G5853.1 GAAAAAGAAAAAATTGTGAATATTTGAAAGGC 10 4479452 0.967675153 2 10 56 1 1.079181246 0.083333333 0.2 0.333333333 10 0 0 12 2L:4479434-4479465 6 11 616 FBgn0053196 31 0.07 0.11 0.35483871 157.1428571 100 -7 -7 -7 0.1 dme-miR-31a-5p 6mer2-7 CTTGCC 2L 448212 448217 + 2L_448212_448217_+ 0.999865143 0.999838671 0.999851907 1.87E-05 ex FBtr0329832|FBtr0078059 447248|447248 448701|448701 2L + 448189 448260 3'utr ex FlyBase G794.2 AAAGAATTTCAAGAGTGCCTAGACTTGCCCTCCATCCCCACCATAGTAATAAGCGAGAGATGATTATCATTT 270 448214 0.763266071 11 264 1407 0.976744186 2.46834733 0.172757475 0.1 0.19269103 270 7 0 294 2L:448189-448260 6 ex FBtr0329832|FBtr0078059 447248|447248 448701|448701 CTTGCC 6mer2-7 dme-miR-31a-5p 2L + 448181 448271 3'utr ex FlyBase G635.1 AGGGAACTAAAGAATTTCAAGAGTGCCTAGACTTGCCCTCCATCCCCACCATAGTAATAAGCGAGAGATGATTATCATTTATTTTTTGTAT 152 448214 0.947407549 8 148 791 0.974248927 2.356025857 0.111587983 0.394736842 0.605150215 152 6 0 227 2L:448181-448271 6 200 617 FBgn0004583 1742.906667 31.79333333 48.95666667 0.114750838 6.290626966 4.085245455 -2 -2 -2 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 448867 448873 - 2L_448867_448873_- 0.801652445 0.801648457 0.801650451 2.76E-06 crq FBtr0078087|FBtr0078087|FBtr0078087|FBtr0331233|FBtr0331233|FBtr0331233 448252|448252|448252|448252|448252|448252 449020|449020|449020|449020|449020|449020 2L - 448816 449139 stop_codon crq FlyBase G6564.1 TATTCGGCTATTCCATGATAGCTTTTGCCAGTGTCTTTCTCATCACCGGCATCACGCTGACTGTGACGAAAAAGTGGGTGCGGCGAACTCCCGAGGATGAGGACATACTTACCAACTAGAGCAAAATAGTTTTTAAGCTTTGCCAAAGTGCCAGGAATTGTTAACTCTCCTAGTTCATTCTGATAGTCGCCCGTCAAATGCTGTTCTTTGTCAGTTATGCGTTATGTAATATGTAAGTGATACGAATCGACGTTCGTCTTGCAGTTTGTGATAGCAAAACCTACTCTAAAAAAAAAACTAAAAACTACTCTAACTCTAAAAAAA 807 448874 0.937649723 54 760 6212 0.944265809 1.564764667 0.175777063 0.133828996 0.250803859 807 29 23 881 2L:448816-449139 7 crq FBtr0331232|FBtr0331232|FBtr0331232|FBtr0078088|FBtr0078088|FBtr0078088|FBtr0078087|FBtr0078087|FBtr0078087|FBtr0331233|FBtr0331233|FBtr0331233|FBtr0304741|FBtr0304741|FBtr0304741 448714|448714|448714|448714|448714|448714|448252|448252|448252|448252|448252|448252|448714|448714|448714 449020|449020|449020|449020|449020|449020|449020|449020|449020|449020|449020|449020|449020|449020|449020 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 448819 449017 3'utr crq FlyBase G5128.1 AAAATAGTTTTTAAGCTTTGCCAAAGTGCCAGGAATTGTTAACTCTCCTAGTTCATTCTGATAGTCGCCCGTCAAATGCTGTTCTTTGTCAGTTATGCGTTATGTAATATGTAAGTGATACGAATCGACGTTCGTCTTGCAGTTTGTGATAGCAAAACCTACTCTAAAAAAAAAACTAAAAACTACTCTAACTCTAAAA 473 448874 0.938145021 44 452 3729 0.952574526 1.700827289 0.185636856 0.412262156 0.623306233 473 22 13 703 2L:448819-449017 7 372.5 618 FBgn0015924 1407.533333 61.27666667 93.41333333 0.264647374 6.07898602 3.98765344 1 1 1 0.1 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 458977 458984 - 2L_458977_458984_- 0.622222369 0.471984686 0.547103528 0.106234096 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 458932 459036 3'utr CG4297 FlyBase G6576.1 ACATATATGTCTGTAACTCTATACTTTTAAATCGGAGGTTTTCACTGTACCTTAGCTTTAAGATTTGTGACTTTATCAATGTGAGTGTCTTTGAGCAAACAAAAC 32 458985 0.990795798 16 31 320 0.972972973 1.556302501 0.162162162 0.15625 0.27027027 32 1 0 36 2L:458932-459036 8 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 458940 459008 3'utr CG4297 FlyBase G5137.1 AAATCGGAGGTTTTCACTGTACCTTAGCTTTAAGATTTGTGACTTTATCAATGTGAGTGTCTTTGAGCA 16 458985 0.950431636 8 13 145 0.857142857 1.255272505 0.142857143 0.3125 0.476190476 16 3 0 18 2L:458940-459008 8 17.5 619 FBgn0031258 226.3333333 3.93 5.996666667 0.077319588 4.452926209 2.918287938 1 1 1 0.1 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 459178 459185 - 2L_459178_459185_- 0.625364119 0.625364267 0.625364193 1.41E-07 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 459149 459233 3'utr CG4297 FlyBase G6578.1 AGCTTCTAAATGTATGTTCATTCGTTGGTAACTTTTACGACTAAGTAATACGCTTAATTTTAGTACAAACAAAATACAAAGTGCA 32 459185 0.98377861 10 32 245 1 1.579783597 0.105263158 0.1875 0.315789474 32 0 0 38 2L:459149-459233 8 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 TACGCTTA 8mer-A1 dme-miR-965-3p 2L - 459158 459234 3'utr CG4297 FlyBase G5138.1 AAGCTTCTAAATGTATGTTCATTCGTTGGTAACTTTTACGACTAAGTAATACGCTTAATTTTAGTACAAACAAAATA 17 459185 0.964547922 6 16 130 0.875 1.322219295 0.083333333 0.294117647 0.5 17 3 0 21 2L:459158-459234 8 19.5 620 FBgn0031258 226.3333333 3.93 5.996666667 0.086156112 4.961832061 3.251806559 0 0 0 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 2L 459276 459281 - 2L_459276_459281_- 0.999879087 0.999872133 0.99987561 4.95E-06 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 459257 459300 3'utr CG4297 FlyBase G6579.1 CTTTTTCTCGTAACACATTCCAAAGGACCAAACATTTTGAAACT 42 459283 0.716370799 3 42 112 1 1.73239376 0.185185185 0.261904762 0.425925926 42 0 0 54 2L:459257-459300 6 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 459253 459294 3'utr CG4297 FlyBase G5139.1 CTCGTAACACATTCCAAAGGACCAAACATTTTGAAACTAATA 35 459283 0.883890613 2 34 93 1 1.72427587 0.037735849 0.441176471 0.641509434 34 0 0 53 2L:459253-459294 6 37 621 FBgn0031258 226.3333333 3.93 5.996666667 0.1634757 9.41475827 6.170094497 2 2 2 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2L 459373 459379 - 2L_459373_459379_- 0.661337684 0.644259093 0.652798389 0.012076394 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 459352 459417 3'utr CG4297 FlyBase G6580.1 AAGGGCAATGCCAACTATGAAATAGACTTGGATGCTGGTCTAGTCTTAGAATCCTAGCCCACAGCA 81 459372 0.961460502 6 79 567 0.989583333 1.977723605 0.145833333 0.185185185 0.3125 81 1 0 95 2L:459352-459417 7 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2L - 459351 459416 3'utr CG4297 FlyBase G5140.1 AGGGCAATGCCAACTATGAAATAGACTTGGATGCTGGTCTAGTCTTAGAATCCTAGCCCACAGCAA 43 459372 0.924453088 9 40 315 0.943661972 1.224014811 0.225352113 0.418604651 0.647887324 43 1 3 67 2L:459351-459416 7 48.5 622 FBgn0031258 226.3333333 3.93 5.996666667 0.214285714 12.34096692 8.08782657 -7 -7 -7 0.1 dme-bantam-3p 6mer3-8 TGATCT 2L 459745 459750 - 2L_459745_459750_- 0.982146051 0.989702377 0.985924214 0.005343111 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 459668 459767 3'utr CG4297 FlyBase G6582.1 CATCTGTTGCAATTGTTTGATCTGTTAGTAGCCGAAGACTTTGTTTTAGTGCAATTATTTGTTAGGTTCCTAGAGCAATTTGTTGTGTTTATTTTAAGAT 44 459726 0.770975045 15 43 409 0.979166667 1.672097858 0.104166667 0.090909091 0.166666667 44 1 0 47 2L:459668-459767 6 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 TGATCT 6mer3-8 dme-bantam-3p 2L - 459684 459768 3'utr CG4297 FlyBase G5141.1 ACATCTGTTGCAATTGTTTGATCTGTTAGTAGCCGAAGACTTTGTTTTAGTGCAATTATTTGTTAGGTTCCTAGAGCAATTTGTT 47 459726 0.989408011 12 44 424 0.947368421 1.857332496 0.157894737 0.468085106 0.671052632 47 4 0 72 2L:459684-459768 6 25 623 FBgn0031258 226.3333333 3.93 5.996666667 0.110456554 6.361323155 4.168982768 -24 -24 -24 0.1 dme-miR-33-5p 6mer2-7 AATGCA 2L 459801 459806 - 2L_459801_459806_- 0.988080555 0.990992298 0.989536427 0.002058883 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 459779 459822 3'utr CG4297 FlyBase G6582.2 TAAATTTTTGCCACCAAATGCAGCCTAGACCAAAAACTAAAAGA 25 459804 0.965797943 4 22 68 0.970588235 1.51851394 0 0.375 0.558823529 24 1 0 33 2L:459779-459822 6 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 AATGCA 6mer2-7 dme-miR-33-5p 2L - 459783 459816 3'utr CG4297 FlyBase G5142.1 TTTGCCACCAAATGCAGCCTAGACCAAAAACTAA 19 459804 0.963185869 2 18 52 0.962962963 1.414973348 0.037037037 0.210526316 0.444444444 19 1 0 26 2L:459783-459816 6 20.5 624 FBgn0031258 226.3333333 3.93 5.996666667 0.090574374 5.216284987 3.41856587 -2 -2 -2 0.1 dme-miR-986-5p 6mer3-8 ATTCGA 2L 460151 460156 - 2L_460151_460156_- 0.882751541 0.457590582 0.670171061 0.300634155 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 460123 460213 3'utr CG4297 FlyBase G6584.1 TTTAGATATCTGTGCAATATTTACATGGAAAATGTCGTGTTTATCTGGAATGCGCGAATTCGAATCTCGATGGGTAAAGCATGAGTAAGCA 17 460143 0.787901674 8 14 117 0.791666667 1.278753601 0.25 0.352941176 0.541666667 17 5 0 19 2L:460123-460213 6 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 ATTCGA 6mer3-8 dme-miR-986-5p 2L - 460135 460180 3'utr CG4297 FlyBase G5144.1 GTCGTGTTTATCTGGAATGCGCGAATTCGAATCTCGATGGGTAAAG 8 460154 0.837338443 7 8 43 1 1 0.6 0.25 0.4 8 0 0 10 2L:460135-460180 6 7 625 FBgn0031258 226.3333333 3.93 5.996666667 0.030927835 1.781170483 1.167315175 -13 -2 -7.5 0.1 dme-miR-92b-3p 8mer-A1 GTGCAATA 2L 460195 460202 - 2L_460195_460202_- 0.625113701 0.628915835 0.627014768 0.002688491 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 460123 460213 3'utr CG4297 FlyBase G6584.1 TTTAGATATCTGTGCAATATTTACATGGAAAATGTCGTGTTTATCTGGAATGCGCGAATTCGAATCTCGATGGGTAAAGCATGAGTAAGCA 17 460203 0.787901674 8 14 117 0.791666667 1.278753601 0.25 0.352941176 0.541666667 17 5 0 19 2L:460123-460213 8 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 GTGCAATA 8mer-A1 dme-miR-92b-3p 2L - 460190 460220 3'utr CG4297 FlyBase G5145.1 TATATATTTTAGATATCTGTGCAATATTTAC 5 460203 0.795599538 2 4 50 0.888888889 0.903089987 0.111111111 0.4 0.666666667 5 1 0 8 2L:460190-460220 8 5.5 626 FBgn0031258 226.3333333 3.93 5.996666667 0.024300442 1.399491094 0.917176209 1 1 1 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2L 460327 460332 - 2L_460327_460332_- 0.999842765 0.99991669 0.999879727 5.23E-05 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 460261 460425 3'utr CG4297 FlyBase G6585.1 ATAAAAGAAACACCACACGTACACTTTAGATACACCACAAAACAAGAAAACTAAAGATATGGATGCAAAAGCAGCTACACTTTACAGAATCTCAAGACTTTTTTTAACATTTGGATTTATTTAAGGAAACGAAATGTAGCGTAATATAGTCATTTTAGGAAAATC 251 460325 0.984723099 25 243 1953 0.974842767 1.889301703 0.034591195 0.219123506 0.383647799 251 5 3 310 2L:460261-460425 6 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 AAGACT 6mer3-8 dme-miR-14-3p 2L - 460273 460382 3'utr CG4297 FlyBase G5146.1 AAGAAAACTAAAGATATGGATGCAAAAGCAGCTACACTTTACAGAATCTCAAGACTTTTTTTAACATTTGGATTTATTTAAGGAAACGAAATGTAGCGTAATATAGTCAT 155 460325 0.987101545 20 150 1308 0.976851852 2.02325246 0.009259259 0.316129032 0.509259259 155 4 1 211 2L:460273-460382 6 172.5 627 FBgn0031258 226.3333333 3.93 5.996666667 0.762150221 43.89312977 28.7659811 -7 -7 -7 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 2L 460494 460501 - 2L_460494_460501_- 0.639613908 0.642613041 0.641113474 0.002120684 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 460451 460525 stop_codon CG4297 FlyBase G6586.1 AAGTCAAATAGGATTGCAGCTTCTACCAAAGATATTTCTGGTCCCTGGACAGGATCAGATGTGTTCGGCTCGTCG 32 460502 0.821810637 9 26 229 0.8 1.146128036 0.085714286 0.0625 0.142857143 32 6 1 28 2L:460451-460525 8 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 460450 460516 stop_codon CG4297 FlyBase G5147.1 AGGATTGCAGCTTCTACCAAAGATATTTCTGGTCCCTGGACAGGATCAGATGTGTTCGGCTCGTCGA 19 460502 0.849296098 7 18 141 0.961538462 1.397940009 0.153846154 0.315789474 0.5 19 1 0 25 2L:460450-460516 8 14.5 628 FBgn0031258 226.3333333 3.93 5.996666667 0.064064801 3.68956743 2.418010006 1 1 1 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2L 4841642 4841648 - 2L_4841642_4841648_- 0.661610666 0.661430649 0.661520657 0.00012735 mxt FBtr0077410|FBtr0332479 4841480|4841480 4842233|4842233 2L - 4841619 4841679 3'utr mxt FlyBase G7575.1 TTTTCAAGATTTGAAATTGTATTTTGTTTTCTCTAGTCTATGCATCATAGAAATTTGTATA 26 4841640 0.993160799 6 24 288 0.931034483 1.431363764 0.137931034 0.115384615 0.206896552 26 2 0 27 2L:4841619-4841679 7 mxt FBtr0332479|FBtr0077410 4841480|4841480 4842233|4842233 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2L - 4841629 4841658 3'utr mxt FlyBase G5894.1 TTTTGTTTTCTCTAGTCTATGCATCATAGA 18 4841640 0.826571868 3 18 178 1 1.361727836 0.217391304 0.277777778 0.434782609 18 0 0 23 2L:4841629-4841658 7 20.5 629 FBgn0031637 825.01 33.64666667 51.55333333 0.024848184 0.609272835 0.39764645 -8 -8 -8 0.1 dme-miR-980-3p 7mer-A1 GCAGCTA 2L 4841919 4841925 - 2L_4841919_4841925_- 0.820201057 0.817455278 0.818828167 0.001941574 mxt FBtr0077410|FBtr0332479 4841480|4841480 4842233|4842233 2L - 4841907 4841940 3'utr mxt FlyBase G7576.1 ACTAATTCAAAAAATGCAGCTAAATGAAAAGCCT 10 4841926 0.935437701 2 7 37 0.818181818 0.954242509 0 0.1 0.181818182 10 2 0 9 2L:4841907-4841940 7 mxt FBtr0332479|FBtr0077410 4841480|4841480 4842233|4842233 GCAGCTA 7mer-A1 dme-miR-980-3p 2L - 4841889 4841937 3'utr mxt FlyBase G5895.1 AATTCAAAAAATGCAGCTAAATGAAAAGCCTCGAAGCGGCCCTAACTTG 16 4841926 0.951671458 3 12 53 0.708333333 1.230448921 0.041666667 0.4375 0.625 16 7 0 17 2L:4841889-4841937 7 10.5 630 FBgn0031637 825.01 33.64666667 51.55333333 0.012727118 0.312066574 0.203672572 1 1 1 0.1 dme-miR-999-3p 6mer3-8 AGTTAA 2L 4841980 4841985 - 2L_4841980_4841985_- 0.99998607 0.999989038 0.999987554 2.05E-06 mxt FBtr0077410|FBtr0332479 4841480|4841480 4842233|4842233 2L - 4841976 4842010 3'utr mxt FlyBase G7577.1 AACTAGAAAATTCAACGAAGCTCTTAGTTAAGTTC 26 4841987 0.732248944 2 25 168 1 1.477121255 0 0.153846154 0.266666667 26 0 0 30 2L:4841976-4842010 6 mxt FBtr0332479|FBtr0077410 4841480|4841480 4842233|4842233 AGTTAA 6mer3-8 dme-miR-999-3p 2L - 4841976 4842010 3'utr mxt FlyBase G5896.1 AACTAGAAAATTCAACGAAGCTCTTAGTTAAGTTC 12 4841987 0.712871479 3 11 82 0.941176471 1.204119983 0 0.25 0.470588235 12 1 0 16 2L:4841976-4842010 6 18.5 631 FBgn0031637 825.01 33.64666667 51.55333333 0.022423971 0.549831583 0.358851675 2 2 2 0.1 dme-miR-33-5p 6mer3-8 CAATGC 2L 4842144 4842149 - 2L_4842144_4842149_- 0.999848134 0.999999888 0.999924011 0.000107339 mxt FBtr0077410|FBtr0332477|FBtr0332479|FBtr0077409|FBtr0332478|FBtr0077411 4841480|4842088|4841480|4842088|4842088|4842088 4842233|4842233|4842233|4842233|4842233|4842233 2L - 4842123 4842154 3'utr mxt FlyBase G7578.1 TGCTTCAATGCTTTTGGCCATGGCCACATCTA 6 4842140 0.93276304 3 6 44 1 0.903089987 0.25 0.166666667 0.375 6 0 0 8 2L:4842123-4842154 6 mxt FBtr0332478|FBtr0077411|FBtr0077409|FBtr0332477|FBtr0332479|FBtr0077410 4842088|4842088|4842088|4842088|4841480|4841480 4842233|4842233|4842233|4842233|4842233|4842233 CAATGC 6mer3-8 dme-miR-33-5p 2L - 4842121 4842167 3'utr mxt FlyBase G5897.1 CGGAGCTGCAGTATGCTTCAATGCTTTTGGCCATGGCCACATCTAAC 7 4842141 0.985224607 6 7 52 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 2L:4842121-4842167 6 6.5 632 FBgn0031637 825.01 33.64666667 51.55333333 0.007878692 0.19318407 0.126083021 -9 -8 -8.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 2L 4842812 4842817 - 2L_4842812_4842817_- 0.990244025 0.994135198 0.992189611 0.002751494 mxt FBtr0300941 4842582 4843059 2L - 4842695 4842881 3'utr mxt FlyBase G7581.1 ATCATTATCATTATCATCATCCAGTCATTAGATTAACGACATACCATCGAAACCAAACCGATCGCTAGTCTTAGAGGTAACAATACATATAATGCATTGAAATTAAAATGTAACTATAGGGAGAATCTGTGTTTTGGCTGTGAAACAGATTAAGTCGTCGCTAAGGATAAGCTGGAAAGGCGGTTGA 574 4842811 0.913793421 22 562 3508 0.981077147 2.527629901 0.288209607 0.160278746 0.298398836 574 12 1 674 2L:4842695-4842881 6 mxt FBtr0300941 4842582 4843059 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 2L - 4842695 4842873 3'utr mxt FlyBase G5898.1 CATTATCATCATCCAGTCATTAGATTAACGACATACCATCGAAACCAAACCGATCGCTAGTCTTAGAGGTAACAATACATATAATGCATTGAAATTAAAATGTAACTATAGGGAGAATCTGTGTTTTGGCTGTGAAACAGATTAAGTCGTCGCTAAGGATAAGCTGGAAAGGCGGTTGA 328 4842811 0.933448488 18 320 1968 0.968283582 2.715167358 0.229477612 0.457317073 0.667910448 328 17 0 519 2L:4842695-4842873 6 258 633 FBgn0031637 825.01 33.64666667 51.55333333 0.312723482 7.667921538 5.004526057 -6 -6 -6 0.1 dme-miR-8-3p 7mer-m8 CAGTATT 2L 4842961 4842967 - 2L_4842961_4842967_- 0.661615243 0.661615238 0.661615241 0 mxt FBtr0300941 4842582 4843059 2L - 4842915 4843031 3'utr mxt FlyBase G7582.1 AATTTTACGTAGCCGGAATACGTATTATTGAATCTCAGTCACAGATAGGCTTTTCTTTTCATGTCAGTATTTTTGCTGTTTTAATTTTATATAACTTATCATTAAGAAAAGGTGAAG 99 4842970 0.990269486 14 95 956 0.964912281 1.740362689 0.061403509 0.131313131 0.245614035 99 3 1 110 2L:4842915-4843031 7 mxt FBtr0300941 4842582 4843059 CAGTATT 7mer-m8 dme-miR-8-3p 2L - 4842943 4843032 3'utr mxt FlyBase G5899.2 TAATTTTACGTAGCCGGAATACGTATTATTGAATCTCAGTCACAGATAGGCTTTTCTTTTCATGTCAGTATTTTTGCTGTTTTAATTTTA 87 4842979 0.722695713 18 83 801 0.960629921 2.086359831 0.086614173 0.310344828 0.527559055 87 5 0 122 2L:4842943-4843032 7 27 634 FBgn0031637 825.01 33.64666667 51.55333333 0.032726876 0.802456905 0.523729471 3 12 7.5 0.1 dme-bantam-3p 6mer2-7 GATCTC 2L 4878074 4878079 - 2L_4878074_4878079_- 0.988025545 0.985950979 0.986988262 0.001466893 Cf2 FBtr0336835|FBtr0304887|FBtr0089647|FBtr0089648|FBtr0089649 4877108|4876889|4877108|4877108|4877108 4879020|4879020|4879020|4879020|4879020 2L - 4878051 4878095 3'utr Cf2 FlyBase G7598.1 ATTTGCACACGAGCAGGATCTCGTTTGTTTTGGCTTTAAAAATTT 27 4878071 0.617901184 4 26 195 0.96969697 1.505149978 0.303030303 0.222222222 0.363636364 27 1 0 32 2L:4878051-4878095 6 Cf2 FBtr0089649|FBtr0089647|FBtr0089648|FBtr0336835|FBtr0304887 4877108|4877108|4877108|4877108|4876889 4879020|4879020|4879020|4879020|4879020 GATCTC 6mer2-7 dme-bantam-3p 2L - 4878019 4878095 3'utr Cf2 FlyBase G5907.1 ATTTGCACACGAGCAGGATCTCGTTTGTTTTGGCTTTAAAAATTTATTTACTTTTAATTAACTAAATGATCTAATCA 42 4878071 0.842401719 9 39 354 0.949152542 1.146128036 0.101694915 0.357142857 0.542372881 42 0 3 56 2L:4878019-4878095 6 27 635 FBgn0000286 431.7866667 13.5 20.64333333 0.062530879 2 1.307928306 -8 -8 -8 0.1 dme-miR-318-3p 7mer-A1 CCAGTGA 2L 4903164 4903170 + 2L_4903164_4903170_+ 0.823338689 0.814947949 0.819143319 0.005933192 CG3036 FBtr0077391|FBtr0336832 4903152|4903152 4903889|4903458 2L + 4903132 4903197 stop_codon CG3036 FlyBase G1738.1 GCCCCTCAAGAACGAGAAGTGATTGCACATCGCCAGTGAGACTCATTCGGTGCCACTGCTGTTCGT 43 4903168 0.967037442 4 43 236 1 1.707570176 0.137254902 0.186046512 0.31372549 43 0 0 51 2L:4903132-4903197 7 CG3036 FBtr0077391|FBtr0336832 4903152|4903152 4903889|4903458 CCAGTGA 7mer-A1 dme-miR-318-3p 2L + 4903139 4903211 stop_codon CG3036 FlyBase G1374.1 AAGAACGAGAAGTGATTGCACATCGCCAGTGAGACTCATTCGGTGCCACTGCTGTTCGTGATGAGCGGAAGGA 26 4903168 0.97092299 6 25 147 0.974358974 1.579783597 0.128205128 0.384615385 0.58974359 26 1 0 38 2L:4903139-4903211 7 32 636 FBgn0031645 281.25 12.45666667 19.09 0.113777778 2.568905539 1.676270299 -4 -4 -4 0.1 dme-miR-304-5p 8mer-A1 TGAGATTA 2L 4903289 4903296 + 2L_4903289_4903296_+ 0.625359224 0.62536194 0.625360582 1.91E-06 CG3036 FBtr0077391|FBtr0336832 4903152|4903152 4903889|4903458 2L + 4903266 4903313 3'utr CG3036 FlyBase G1739.1 TAAAGTAGTTGTTACTCCCACATTGAGATTACGGGGCTTTCATTTGGC 65 4903288 0.879752084 2 64 520 0.95890411 1.84509804 0.082191781 0.092307692 0.191780822 65 3 0 70 2L:4903266-4903313 8 CG3036 FBtr0077391|FBtr0336832 4903152|4903152 4903889|4903458 TGAGATTA 8mer-A1 dme-miR-304-5p 2L + 4903269 4903311 3'utr CG3036 FlyBase G1375.1 AGTAGTTGTTACTCCCACATTGAGATTACGGGGCTTTCATTTG 32 4903288 0.847297904 4 32 230 1 1.707570176 0.137254902 0.46875 0.666666667 32 0 0 51 2L:4903269-4903311 8 48 637 FBgn0031645 281.25 12.45666667 19.09 0.170666667 3.853358309 2.514405448 1 1 1 0.1 dme-miR-965-3p 6mer2-7 ACGCTT 2L 4947905 4947910 + 2L_4947905_4947910_+ 0.999999999 1 1 0 betaggt-I FBtr0330714|FBtr0078991 4947866|4947832 4948324|4948324 2L + 4947847 4947930 stop_codon betaggt-I FlyBase G1751.1 AAAGCACGAGGGGAAAGTTAAAGCACACTATTGTATTTATATTGGCCACATTTTAGCCACGCTTTTTATGCCCTTGCAGTTAGT 43 4947911 0.991726943 11 35 385 0.829787234 1.290034611 0.212765957 0.093023256 0.170212766 43 7 1 39 2L:4947847-4947930 6 betaggt-I FBtr0078991|FBtr0330714 4947832|4947866 4948324|4948324 ACGCTT 6mer2-7 dme-miR-965-3p 2L + 4947842 4947930 stop_codon betaggt-I FlyBase G1380.1 CGCACAAAGCACGAGGGGAAAGTTAAAGCACACTATTGTATTTATATTGGCCACATTTTAGCCACGCTTTTTATGCCCTTGCAGTTAGT 23 4947912 0.989239742 11 20 195 0.875 1.06694679 0.375 0.47826087 0.7 23 3 2 35 2L:4947842-4947930 6 16 638 FBgn0015000 534.58 37.06666667 56.91333333 0.029930039 0.431654676 0.281129202 -6 -7 -6.5 0.1 dme-miR-79-3p 6mer2-7 AGCTTT 2L 4948199 4948204 + 2L_4948199_4948204_+ 0.994687072 0.987856374 0.991271723 0.004830034 betaggt-I FBtr0330714|FBtr0078991 4947866|4947832 4948324|4948324 2L + 4948101 4948323 3'utr betaggt-I FlyBase G1753.1 CGGTATAAATGTTATAATTACTGCAAGGGTATATAAGTTTCGGCTTGCCGATTCTAGCTTACTTTCTGGTTTACATGTATTTTAATGCAAAAAGCTCGAGCTTTTGGAGAGAGAGATGAATAAGTTAGTATGTTTATTGTACAGCCTAAATTAATGTTAACAATGTGTAAGATTAAGCTTAAAAGTAAATTAAAGCGTCCCATGCTGAGGCATGTATTTACAG 64 4948204 0.983853615 27 59 466 0.918918919 1.832508913 0.216216216 0.140625 0.256756757 64 6 0 68 2L:4948101-4948323 6 betaggt-I FBtr0078991|FBtr0330714 4947832|4947866 4948324|4948324 AGCTTT 6mer2-7 dme-miR-79-3p 2L + 4948150 4948232 3'utr betaggt-I FlyBase G1382.1 GATTCTAGCTTACTTTCTGGTTTACATGTATTTTAATGCAAAAAGCTCGAGCTTTTGGAGAGAGAGATGAATAAGTTAGTATG 26 4948205 0.981302468 11 22 188 0.875 1.243038049 0.225 0.346153846 0.575 26 4 1 35 2L:4948150-4948232 6 27.5 639 FBgn0015000 534.58 37.06666667 56.91333333 0.051442254 0.741906475 0.483190816 -5 -6 -5.5 0.1 dme-miR-282-5p 6mer2-7 GAGGCT 2L 4948347 4948352 - 2L_4948347_4948352_- 0.973144606 0.875039612 0.924092109 0.069370711 jet FBtr0110896|FBtr0079057 4948204|4948204 4948393|4948587 2L - 4948275 4948444 stop_codon jet FlyBase G7611.1 ATGGGCTACATGCCAACTGTGCAACATCACCGCCTGTTCCTGCAGGTTTGAGATTAATTCTGATTCCGGGCCAATATTACCAATGTACCAAGGAGGCTTTCGAGGCTATCCAATACTTTTGCTGTAAATACATGCCTCAGCATGGGACGCTTTAATTTACTTTTAAGCTT 148 4948361 0.823037626 23 147 876 0.994565217 2.26245109 0.032608696 0.189189189 0.347826087 148 1 0 183 2L:4948275-4948444 6 jet FBtr0079057 4948204 4948587 GAGGCT 6mer2-7 dme-miR-282-5p 2L - 4948330 4948414 stop_codon jet FlyBase G5916.2 CGCCTGTTCCTGCAGGTTTGAGATTAATTCTGATTCCGGGCCAATATTACCAATGTACCAAGGAGGCTTTCGAGGCTATCCAATA 91 4948361 0.814623409 9 86 502 0.967479675 1.774516966 0.016260163 0.274725275 0.463414634 91 3 1 119 2L:4948330-4948414 6 59.5 640 FBgn0031652 30.83333333 2.966666667 4.63 1.92972973 20.05617978 12.85097192 9 9 9 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 2L 4975378 4975384 - 2L_4975378_4975384_- 0.521200327 0.512992361 0.517096344 0.005803862 Gmd FBtr0079049 4975298 4975578 2L - 4975371 4975400 3'utr Gmd FlyBase G7634.1 ACGTTCATGTTCAGTGTGTGATTCTACTTG 8 4975385 0.720897976 4 8 71 1 1.041392685 0.181818182 0.25 0.454545455 8 0 0 11 2L:4975371-4975400 7 Gmd FBtr0079049 4975298 4975578 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 4975358 4975394 3'utr Gmd FlyBase G5933.1 ATGTTCAGTGTGTGATTCTACTTGTTTTTATACAGTA 6 4975386 0.985209722 4 6 49 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 2L:4975358-4975394 7 7 641 FBgn0031661 247.5733333 19.21 29.15 0.028274451 0.364393545 0.240137221 1 2 1.5 0.1 dme-miR-304-5p 6mer2-7 GAGATT 2L 4978464 4978469 + 2L_4978464_4978469_+ 0.962882815 0.971699372 0.967291093 0.006234278 CG3792 FBtr0078997 4978417 4978567 2L + 4978439 4978539 3'utr CG3792 FlyBase G1791.1 AAAAGTAGAAACAGATATACATAGAGAGATTTGAACTCGAAACATAGGTTGCAACAACTTCTCGACAATGTAGAACAAATATGCGATGTTTAAATAATTGA 192 4978469 0.888242519 14 188 954 0.98206278 1.738384124 0.058295964 0.140625 0.260089686 192 1 3 219 2L:4978439-4978539 6 CG3792 FBtr0078997 4978417 4978567 GAGATT 6mer2-7 dme-miR-304-5p 2L + 4978439 4978504 3'utr CG3792 FlyBase G1408.1 AAAAGTAGAAACAGATATACATAGAGAGATTTGAACTCGAAACATAGGTTGCAACAACTTCTCGAC 88 4978469 0.697007991 7 85 384 0.97080292 1.646730386 0.051094891 0.409090909 0.620437956 88 2 2 133 2L:4978439-4978504 6 109 642 FBgn0031662 187.28 19.3 29.44333333 0.582016232 5.647668394 3.702026492 -5 -5 -5 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 2L 4992149 4992155 + 2L_4992149_4992155_+ 0.512443127 0.513909878 0.513176502 0.001037184 CG34126 FBtr0329975|FBtr0329977|FBtr0329976|FBtr0329974|FBtr0290010 4991661|4991610|4991597|4991610|4991610 4992702|4992435|4992435|4992702|4992435 2L + 4992115 4992224 3'utr CG34126 FlyBase G1812.1 ACCAATTCCACTAAGATTGGATAGGACATATTGTTGTGATTCATGATCATATCAAAACTGAATTCTAGAAGCTCTATGCATTGCTGTTGTAATCGTGTGCTAACCAAATA 29 4992147 0.986850387 16 26 224 0.911764706 1.491361694 0.147058824 0.172413793 0.294117647 29 3 0 31 2L:4992115-4992224 7 CG34126 FBtr0329974|FBtr0329976|FBtr0329977|FBtr0329975|FBtr0290010 4991610|4991597|4991610|4991661|4991610 4992702|4992435|4992435|4992702|4992435 TGTGATT 7mer-m1 dme-miR-308-3p 2L + 4992111 4992230 3'utr CG34126 FlyBase G1425.1 TAAAACCAATTCCACTAAGATTGGATAGGACATATTGTTGTGATTCATGATCATATCAAAACTGAATTCTAGAAGCTCTATGCATTGCTGTTGTAATCGTGTGCTAACCAAATATTTGGC 36 4992148 0.775562654 19 33 286 0.862745098 1.342422681 0.176470588 0.333333333 0.529411765 36 6 1 44 2L:4992111-4992230 7 14 643 FBgn0083962 1546.97 31.44666667 48.27666667 0.009049949 0.445198219 0.289995167 2 1 1.5 0.1 dme-miR-79-3p 6mer2-7 AGCTTT 2L 4993806 4993811 - 2L_4993806_4993811_- 0.972721746 0.999781802 0.986251774 0.01913438 Rtnl1 FBtr0079039|FBtr0079043|FBtr0079040|FBtr0079038|FBtr0079044|FBtr0079042|FBtr0332413|FBtr0301539|FBtr0301540 4993639|4993639|4993639|4993639|4992806|4993639|4993639|4993639|4992806 4994207|4994207|4994207|4994207|4994207|4994207|4994207|4994207|4994207 2L - 4993773 4993820 3'utr Rtnl1 FlyBase G7654.1 GATTTATTCAGCTTTCTTAGTTTTCATGTGACCCTTTTTAAATTAATT 7 4993813 0.995863691 6 6 81 0.857142857 0.77815125 0.285714286 0 0 7 1 0 6 2L:4993773-4993820 6 Rtnl1 FBtr0301540|FBtr0301539|FBtr0332413|FBtr0079042|FBtr0079044|FBtr0079038|FBtr0079040|FBtr0079043|FBtr0079039 4992806|4993639|4993639|4993639|4992806|4993639|4993639|4993639|4993639 4994207|4994207|4994207|4994207|4994207|4994207|4994207|4994207|4994207 AGCTTT 6mer2-7 dme-miR-79-3p 2L - 4993773 4993822 3'utr Rtnl1 FlyBase G5948.1 TCGATTTATTCAGCTTTCTTAGTTTTCATGTGACCCTTTTTAAATTAATT 10 4993813 0.9938489 7 10 115 1 1.176091259 0.266666667 0.3 0.533333333 10 0 0 15 2L:4993773-4993822 6 6.5 644 FBgn0053113 2720.043333 137.31 210.0133333 0.002389668 0.04733814 0.030950416 2 2 2 0.1 dme-miR-282-5p 6mer2-7 GAGGCT 2L 5010334 5010339 - 2L_5010334_5010339_- 0.999995363 0.999995919 0.999995641 3.54E-07 Tfb5 FBtr0301130 5009929 5010486 2L - 5010315 5010362 3'utr Tfb5 FlyBase G7669.1 AGCGGCGTGCCCGCAAAGCCTTGGAGGCTCTGGAGCAGGACAACTACC 6 5010341 0.931640874 2 6 21 1 0.77815125 0.333333333 0 0 6 0 0 6 2L:5010315-5010362 6 Tfb5 FBtr0301130 5009929 5010486 GAGGCT 6mer2-7 dme-miR-282-5p 2L - 5010322 5010362 3'utr Tfb5 FlyBase G5954.1 AGCGGCGTGCCCGCAAAGCCTTGGAGGCTCTGGAGCAGGAC 5 5010341 0.747334656 2 5 14 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 2L:5010322-5010362 6 5 645 FBgn0265968 206.6566667 30.92333333 47.31 0.024194719 0.161690202 0.105685902 2 2 2 0.1 dme-miR-1008-3p 6mer3-8 AGCTGT 2L 5011996 5012001 + 2L_5011996_5012001_+ 0.999704298 0.99061284 0.995158569 0.006428661 CG3887 FBtr0332412|FBtr0079000|FBtr0332411 5011861|5011861|5011861 5012127|5012127|5012127 2L + 5011958 5012034 3'utr CG3887 FlyBase G1817.1 AACTTAAACATAAGCTCTTGTCCCGACATTATCCACTTAGCTGTATTTCTGTTTTCACCCCAACTATAGCCTACTCT 16 5012004 0.991313207 7 14 145 0.9 1.255272505 0.05 0.1875 0.35 16 2 0 18 2L:5011958-5012034 6 CG3887 FBtr0332411|FBtr0332412|FBtr0079000 5011861|5011861|5011861 5012127|5012127|5012127 AGCTGT 6mer3-8 dme-miR-1008-3p 2L + 5011960 5012021 3'utr CG3887 FlyBase G1427.1 CTTAAACATAAGCTCTTGTCCCGACATTATCCACTTAGCTGTATTTCTGTTTTCACCCCAAC 6 5012004 0.98220162 4 5 42 1 0.903089987 0.25 0.333333333 0.5 6 0 0 8 2L:5011960-5012021 6 6.5 646 FBgn0031670 479.6666667 65.39 99.91 0.013551077 0.099403579 0.065058553 -8 -8 -8 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 2L 5047718 5047724 + 2L_5047718_5047724_+ 0.620171824 0.62019163 0.620181727 1.40E-05 CG44000 FBtr0334121|FBtr0334123|FBtr0334120|FBtr0334119|FBtr0334122 5046974|5046974|5046974|5046974|5046974 5048365|5048365|5048365|5048365|5048365 2L + 5047682 5047744 3'utr CG44000 FlyBase G1844.1 AACACTTAAGCTGGTCAAGGATAAAAAGGACAAAATTGCATTTGAGTACATCATGGAGAACGC 75 5047717 0.915481584 4 69 384 0.917525773 1.648360011 0.288659794 0.173333333 0.360824742 75 7 1 89 2L:5047682-5047744 7 CG44000 FBtr0334121|FBtr0334122|FBtr0334119|FBtr0334120|FBtr0334123 5046974|5046974|5046974|5046974|5046974 5048365|5048365|5048365|5048365|5048365 TGCATTT 7mer-m8 dme-miR-277-3p 2L + 5047686 5047744 3'utr CG44000 FlyBase G1463.1 CTTAAGCTGGTCAAGGATAAAAAGGACAAAATTGCATTTGAGTACATCATGGAGAACGC 54 5047717 0.962872234 5 54 275 1 1.913813852 0.243902439 0.351851852 0.573170732 54 0 0 82 2L:5047686-5047744 7 61 647 FBgn0264742 443.39 23.51666667 36.15 0.1375764 2.593905032 1.687413555 1 1 1 0.1 dme-miR-277-3p 6mer3-8 TGCATT 2L 5047926 5047931 + 2L_5047926_5047931_+ 0.76231521 0.999993564 0.881154387 0.168064008 CG44000 FBtr0334121|FBtr0334123|FBtr0334120|FBtr0334119|FBtr0334122 5046974|5046974|5046974|5046974|5046974 5048365|5048365|5048365|5048365|5048365 2L + 5047856 5048010 3'utr CG44000 FlyBase G1845.1 GTTTTCTATAAAATTGCACCCGATATCGTTGTAAAATCCTACTTAGAAATTGCATACGTCCTTATTTGTTTGCATTGTGTGCGAGATCGATTGTATATGGGAAAAGTAATCTTAACGTTTGCGTAGTCAAATTAACATAGTGGATACATACATCG 29 5047917 0.989679387 15 23 216 0.810810811 1.477121255 0.135135135 0.172413793 0.351351351 29 7 0 30 2L:5047856-5048010 6 CG44000 FBtr0334121|FBtr0334122|FBtr0334119|FBtr0334120|FBtr0334123 5046974|5046974|5046974|5046974|5046974 5048365|5048365|5048365|5048365|5048365 TGCATT 6mer3-8 dme-miR-277-3p 2L + 5047896 5047979 3'utr CG44000 FlyBase G1464.1 ACTTAGAAATTGCATACGTCCTTATTTGTTTGCATTGTGTGCGAGATCGATTGTATATGGGAAAAGTAATCTTAACGTTTGCGT 20 5047917 0.727463908 7 18 148 0.923076923 1.380211242 0.346153846 0.3 0.461538462 20 2 0 24 2L:5047896-5047979 6 4 648 FBgn0264742 443.39 23.51666667 36.15 0.009021403 0.170092133 0.110650069 9 9 9 0.1 dme-miR-1008-3p 6mer3-8 AGCTGT 2L 5055818 5055823 + 2L_5055818_5055823_+ 0.999990658 0.999930853 0.999960756 4.23E-05 His3.3A FBtr0079010|FBtr0333537|FBtr0333536 5055758|5055758|5055758 5055995|5055995|5056149 2L + 5055761 5055851 3'utr His3.3A FlyBase G1858.1 TGCCCATGACCGCCATCTTGGATTGGAAAAGCAGTGGCGGCAAAACTACCAACCCACAGCTGTCGCTTGGAGGGGGGAACTCGGAGCTAGA 34 5055827 0.704302051 9 33 119 0.975 1.591064607 0.325 0.176470588 0.3 34 1 0 39 2L:5055761-5055851 6 His3.3A FBtr0333536|FBtr0333537|FBtr0079010 5055758|5055758|5055758 5056149|5055995|5055995 AGCTGT 6mer3-8 dme-miR-1008-3p 2L + 5055767 5055848 3'utr His3.3A FlyBase G1477.1 TGACCGCCATCTTGGATTGGAAAAGCAGTGGCGGCAAAACTACCAACCCACAGCTGTCGCTTGGAGGGGGGAACTCGGAGCT 21 5055828 0.898869015 7 20 75 0.931034483 1.431363764 0.482758621 0.285714286 0.482758621 21 2 0 27 2L:5055767-5055848 6 17.5 649 FBgn0014857 1249.59 205.6366667 313.4066667 0.014004594 0.085101555 0.055837995 -9 -10 -9.5 0.1 dme-miR-92b-3p 8mer-m1 GTGCAATT 2L 5072544 5072551 - 2L_5072544_5072551_- 0.596698355 0.596695244 0.596696799 2.26E-06 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 2L - 5072517 5072647 3'utr pgant5 FlyBase G7737.1 ATTTTTAAAATCGATTATGTGTGACGAACCCATAGTTATAGAGAAACGACGATATATACACATACGGCAAAATAGCAACTATTTTAACTGGTGACGGTGCAATTTTTAATTAACATTTAAAATGAAACAGG 19 5072575 0.97653 11 18 121 0.947368421 1.255272505 0.105263158 0 0 19 1 0 18 2L:5072517-5072647 8 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 GTGCAATT 8mer-m1 dme-miR-92b-3p 2L - 5072534 5072605 3'utr pgant5 FlyBase G6028.1 GAAACGACGATATATACACATACGGCAAAATAGCAACTATTTTAACTGGTGACGGTGCAATTTTTAATTAAC 11 5072545 0.979459481 7 9 64 0.833333333 1.176091259 0.166666667 0.454545455 0.666666667 11 3 0 15 2L:5072534-5072605 8 4.5 650 FBgn0031681 2245.746667 62.23 95.52 0.002003788 0.07231239 0.047110553 24 -6 9 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA 2L 5072906 5072913 - 2L_5072906_5072913_- 0.625364166 0.625364269 0.625364218 7.07E-08 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 2L - 5072884 5073118 3'utr pgant5 FlyBase G7740.1 AAAGAAAAAAAAATCTCTCAAAATTGCACGCATATCATAAATACAGTGTAAAAATATATATATAAGCTACATTCAAACGAGAACTAAACAAAAACAATGTAAATATGATTAATGTAGCTATTAAAAATATACATTTAAATAAAATATCTATGTAGTACCTATATGATATACACATATGCAAAGCAAGCAAAACTGTACTATAAATTGCATTTAGTTCTAGGCTTAACGTTAAGTT 55 5072914 0.988669298 20 47 441 0.867647059 1.770852012 0.058823529 0.218181818 0.367647059 55 9 0 59 2L:5072884-5073118 8 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 TGCATTTA 8mer-A1 dme-miR-277-3p 2L - 5072888 5072978 3'utr pgant5 FlyBase G6029.1 AAAATATCTATGTAGTACCTATATGATATACACATATGCAAAGCAAGCAAAACTGTACTATAAATTGCATTTAGTTCTAGGCTTAACGTTA 22 5072914 0.930655179 7 22 178 1 1.531478917 0 0.409090909 0.617647059 22 0 0 34 2L:5072888-5072978 8 22.5 651 FBgn0031681 2245.746667 62.23 95.52 0.01001894 0.361561948 0.235552764 1 1 1 0.1 dme-miR-252-5p 6mer3-8 GTACTT 2L 5073313 5073318 - 2L_5073313_5073318_- 0.999998649 0.99999807 0.99999836 3.54E-07 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 2L - 5073267 5073338 3'utr pgant5 FlyBase G7742.2 TGACATTCCTAGCTAGAATTGTACTTGAGAAAATTTACGTTTGTTTTGTTTTAATTTTACCTTAAGTCACTT 18 5073304 0.797940764 5 15 140 0.952380952 1 0.142857143 0.111111111 0.238095238 18 0 1 20 2L:5073267-5073338 6 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 GTACTT 6mer3-8 dme-miR-252-5p 2L - 5073291 5073329 3'utr pgant5 FlyBase G6030.1 TAGCTAGAATTGTACTTGAGAAAATTTACGTTTGTTTTG 9 5073304 0.693871085 4 7 70 0.894736842 1.230448921 0.578947368 0.666666667 0.842105263 9 2 0 17 2L:5073291-5073329 6 7 652 FBgn0031681 2245.746667 62.23 95.52 0.003117003 0.112485939 0.073283082 -14 -14 -14 0.1 dme-miR-277-3p 7mer-A1 GCATTTA 2L 5073486 5073492 - 2L_5073486_5073492_- 0.823349561 0.823349265 0.823349413 2.12E-07 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 2L - 5073470 5073514 3'utr pgant5 FlyBase G7744.2 TCGACCAAGTACCAATAAATTGGCATTTAACTGACGTTTTGTGCT 38 5073494 0.766249955 6 36 262 0.934782609 1.633468456 0.152173913 0.210526316 0.347826087 38 3 0 43 2L:5073470-5073514 7 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 GCATTTA 7mer-A1 dme-miR-277-3p 2L - 5073470 5073518 3'utr pgant5 FlyBase G6031.1 AGCTTCGACCAAGTACCAATAAATTGGCATTTAACTGACGTTTTGTGCT 30 5073494 0.809947269 4 29 212 1 1.653212514 0 0.266666667 0.511111111 30 0 0 45 2L:5073470-5073518 7 30 653 FBgn0031681 2245.746667 62.23 95.52 0.013358586 0.482082597 0.314070352 2 2 2 0.1 dme-miR-7-5p 7mer-m8 GTCTTCC 2L 5073648 5073654 - 2L_5073648_5073654_- 0.705014399 0.669256899 0.687135649 0.025284371 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 2L - 5073602 5073846 3'utr pgant5 FlyBase G7746.1 TAAATACAACTCAACTCAACGGATCCTACTAACTATACTGAGAACTTCCAATTTATGTTTAATCCTAGCCGGCTCCTGTTTTCGACGTTTATGTAGCCTAAGTTCAAGCGGATTCAATATCCCTCTCTCTCTCTCTATCTTTGTGTGCGTGAATGTGTGTAGGCGGCCGGAGGAGTCCTTCGGCAGCAGGATGTCTTCCCAAAATCTTGATGCGCGTGTGTGAATGTATAGATCTGTTTACATGA 125 5073655 0.906079959 33 118 741 0.944827586 2.136720567 0.172413793 0.136 0.255172414 125 8 0 137 2L:5073602-5073846 7 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 GTCTTCC 7mer-m8 dme-miR-7-5p 2L - 5073579 5073686 3'utr pgant5 FlyBase G6032.1 AGGCGGCCGGAGGAGTCCTTCGGCAGCAGGATGTCTTCCCAAAATCTTGATGCGCGTGTGTGAATGTATAGATCTGTTTACATGATGTGCATGTATATGTGTTTATAT 44 5073655 0.893766348 13 42 264 0.961538462 1.875061263 0.243589744 0.590909091 0.769230769 44 3 0 75 2L:5073579-5073686 7 46 654 FBgn0031681 2245.746667 62.23 95.52 0.020483165 0.739193315 0.481574539 1 1 1 0.1 dme-miR-79-3p 6mer3-8 TAGCTT 2L 5099541 5099546 - 2L_5099541_5099546_- 0.999992883 0.999997864 0.999995373 3.54E-06 CG8680 FBtr0345334|FBtr0345333|FBtr0079025 5099498|5099175|5099498 5099601|5099601|5099601 2L - 5099507 5099564 3'utr CG8680 FlyBase G7764.1 CTTTCTATCCTGTTGCGCTAGCTTGAACTAAACTAAACTAAATAAAATTAGAACACCA 7 5099541 0.987667761 5 7 53 1 0.903089987 0 0.142857143 0.25 7 0 0 8 2L:5099507-5099564 6 CG8680 FBtr0345333|FBtr0079025|FBtr0345334 5099175|5099498|5099498 5099601|5099601|5099601 TAGCTT 6mer3-8 dme-miR-79-3p 2L - 5099499 5099575 3'utr CG8680 FlyBase G6044.1 AGCTAAAACACCTTTCTATCCTGTTGCGCTAGCTTGAACTAAACTAAACTAAATAAAATTAGAACACCAAAAAGCTA 7 5099562 0.984748284 6 7 52 1 1.079181246 0 0.571428571 0.75 7 0 0 12 2L:5099499-5099575 6 5 655 FBgn0031684 213 43.71 66.32666667 0.023474178 0.1143903 0.075384461 -5 16 5.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 2L 5186355 5186361 + 2L_5186355_5186361_+ 0.814959065 0.823349555 0.81915431 0.005932979 Msp300 FBtr0303384 5186161 5186528 2L + 5186320 5186376 3'utr Msp300 FlyBase G1951.1 AAACGCATCCAATAGGCTTATGTTTTGAGTTTGTATACCTGAACGAAAAAGTTACTA 17 5186353 0.979338163 8 16 113 0.958333333 1.361727836 0.083333333 0.235294118 0.458333333 17 1 0 23 2L:5186320-5186376 7 Msp300 FBtr0303384 5186161 5186528 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2L + 5186323 5186370 3'utr Msp300 FlyBase G1537.1 CGCATCCAATAGGCTTATGTTTTGAGTTTGTATACCTGAACGAAAAAG 8 5186353 0.974249724 5 8 50 1 1.113943352 0.153846154 0.5 0.692307692 8 0 0 13 2L:5186323-5186370 7 9.5 656 FBgn0261836 15716.32333 95.7 146.9 0.000604467 0.099268548 0.064669843 2 2 2 0.1 dme-miR-980-5p 7mer-m1 AAAAACT 2L 5205844 5205850 + 2L_5205844_5205850_+ 0.765586662 0.765586663 0.765586663 0 Msp300 FBtr0303388|FBtr0303385|FBtr0303387|FBtr0332405 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 2L + 5205828 5205871 3'utr Msp300 FlyBase G2009.1 ACGTATATGATCCCAAAAAAACTATAGAGAACCCAAACATTTTG 8 5205834 0.933032584 5 7 25 0.9 0.954242509 0.1 0.125 0.3 8 1 0 9 2L:5205828-5205871 7 Msp300 FBtr0332405|FBtr0303385|FBtr0303387|FBtr0303388 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 AAAAACT 7mer-m1 dme-miR-980-5p 2L + 5205797 5205851 3'utr Msp300 FlyBase G1587.1 CAGCAAACAATTTATATATTCATATATACCCACGTATATGATCCCAAAAAAACTA 8 5205835 0.975254642 7 7 50 0.923076923 1.079181246 0 0.5 0.692307692 8 1 0 12 2L:5205797-5205851 7 6 657 FBgn0261836 15716.32333 95.7 146.9 0.000381769 0.062695925 0.040844112 10 9 9.5 0.1 dme-bantam-3p 8mer-A1 TGATCTCA 2L 5206021 5206028 + 2L_5206021_5206028_+ 0.630901325 0.63108399 0.630992657 0.000129188 Msp300 FBtr0303388|FBtr0303385|FBtr0303387|FBtr0332405 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 2L + 5206011 5206052 3'utr Msp300 FlyBase G2011.1 TCGCAGGATATGATCTCAAGTTCCTGCTGCCAGCGATGGGCT 9 5206020 0.96282156 5 9 49 1 1.113943352 0.153846154 0.333333333 0.538461538 9 0 0 13 2L:5206011-5206052 8 Msp300 FBtr0332405|FBtr0303385|FBtr0303387|FBtr0303388 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 TGATCTCA 8mer-A1 dme-bantam-3p 2L + 5205999 5206056 3'utr Msp300 FlyBase G1589.1 CGTGGAACATTTTCGCAGGATATGATCTCAAGTTCCTGCTGCCAGCGATGGGCTAGAA 13 5206019 0.84509398 8 13 77 1 1.146128036 0.5 0.076923077 0.142857143 13 0 0 14 2L:5205999-5206056 8 10.5 658 FBgn0261836 15716.32333 95.7 146.9 0.000668095 0.109717868 0.071477195 1 2 1.5 0.1 dme-miR-12-5p 7mer-A1 ATACTCA 2L 5206385 5206391 + 2L_5206385_5206391_+ 0.82334953 0.823349562 0.823349546 7.07E-08 Msp300 FBtr0303388|FBtr0303385|FBtr0303387|FBtr0332405 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 2L + 5206368 5206419 3'utr Msp300 FlyBase G2016.1 CATTTCAAGCATTCCTGATACTCATTTCCAAATTACCAATAGACATTGACCA 48 5206382 0.981900934 5 46 343 0.983870968 1.785329835 0 0.229166667 0.403225806 48 1 0 61 2L:5206368-5206419 7 Msp300 FBtr0332405|FBtr0303385|FBtr0303387|FBtr0303388 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 ATACTCA 7mer-A1 dme-miR-12-5p 2L + 5206369 5206432 3'utr Msp300 FlyBase G1594.1 ATTTCAAGCATTCCTGATACTCATTTCCAAATTACCAATAGACATTGACCATCGAAGCCAGCTC 37 5206382 0.987366102 7 29 263 0.804347826 0.966141733 0.065217391 0.189189189 0.347826087 37 6 3 37 2L:5206369-5206432 7 40.5 659 FBgn0261836 15716.32333 95.7 146.9 0.002576939 0.423197492 0.275697754 3 3 3 0.1 "dme-miR-995-3p,dme-miR-998-3p" 7mer-A1 GGTGCTA 2L 5206502 5206508 + 2L_5206502_5206508_+ 0.823331265 0.823221889 0.823276577 7.74E-05 Msp300 FBtr0303388|FBtr0303385|FBtr0303387|FBtr0332405 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 2L + 5206482 5206526 3'utr Msp300 FlyBase G2018.1 CGAAGCAAGTGTCCTATGCCGGTGCTAAACCAACCTACAAATTTT 12 5206498 0.75712565 3 12 64 1 1.146128036 0 0.166666667 0.285714286 12 0 0 14 2L:5206482-5206526 7 Msp300 FBtr0332405|FBtr0303385|FBtr0303387|FBtr0303388 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 GGTGCTA 7mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 2L + 5206478 5206513 3'utr Msp300 FlyBase G1595.1 AAAACGAAGCAAGTGTCCTATGCCGGTGCTAAACCA 7 5206498 0.948153779 2 7 32 1 1.041392685 0.181818182 0.428571429 0.636363636 7 0 0 11 2L:5206478-5206513 7 9 660 FBgn0261836 15716.32333 95.7 146.9 0.000572653 0.094043887 0.061266167 4 4 4 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 5206966 5206971 + 2L_5206966_5206971_+ 0.999991835 0.999992794 0.999992315 7.07E-07 Msp300 FBtr0303388|FBtr0303385|FBtr0303387|FBtr0332405 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 2L + 5206929 5206996 3'utr Msp300 FlyBase G2019.3 ATGTAGCATTTTAAGATTTCCTTTCTTGTGAACAACTGTACCTTTATATGCATTATGATTATTAAAAA 755 5206965 0.851126469 20 736 5897 0.982824427 2.167739185 0.055343511 0.274172185 0.477099237 755 12 6 1030 2L:5206929-5206996 6 Msp300 FBtr0332405|FBtr0303385|FBtr0303387|FBtr0303388 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 5206929 5206996 3'utr Msp300 FlyBase G1599.2 ATGTAGCATTTTAAGATTTCCTTTCTTGTGAACAACTGTACCTTTATATGCATTATGATTATTAAAAA 587 5206965 0.849661248 17 574 4508 0.982121573 2.915927212 0.063170441 0.313458262 0.519666269 587 15 0 824 2L:5206929-5206996 6 599 661 FBgn0261836 15716.32333 95.7 146.9 0.03811324 6.259143156 4.077603812 1 1 1 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA 2L 5219535 5219540 - 2L_5219535_5219540_- 1 1 1 0 tkv FBtr0079088|FBtr0079086|FBtr0079087|FBtr0079089 5218998|5218998|5218998|5218998 5220092|5220092|5220092|5220092 2L - 5219488 5219601 3'utr tkv FlyBase G7773.1 AGAACATGTCCTTATATGTTTTGTTTGTATCTAGTGTTTAAGTGTAAACTTTGCAGACTTTGTGCAAGTAAATGCTGCCTTTTGTAAAATCCACGGAATTAGTTGCCTTAAGAC 42 5219521 0.987873475 14 37 330 0.894736842 1.008600172 0.298245614 0.285714286 0.473684211 42 2 4 51 2L:5219488-5219601 6 tkv FBtr0079087|FBtr0079089|FBtr0079088|FBtr0079086 5218998|5218998|5218998|5218998 5220092|5220092|5220092|5220092 GTGCAA 6mer3-8 dme-miR-92b-3p 2L - 5219509 5219573 3'utr tkv FlyBase G6049.1 ATCTAGTGTTTAAGTGTAAACTTTGCAGACTTTGTGCAAGTAAATGCTGCCTTTTGTAAAATCCA 19 5219522 0.686550624 8 18 164 0.92 1.361727836 0.32 0.263157895 0.44 19 2 0 23 2L:5219509-5219573 6 24.5 662 FBgn0003716 310.6566667 12.88 19.87333333 0.0788652 1.902173913 1.232807783 -19 -18 -18.5 0.1 dme-miR-965-3p 7mer-m8 TACGCTT 2L 5219658 5219664 - 2L_5219658_5219664_- 0.620204278 0.620204853 0.620204565 4.24E-07 tkv FBtr0079088|FBtr0079086|FBtr0079087|FBtr0079089 5218998|5218998|5218998|5218998 5220092|5220092|5220092|5220092 2L - 5219651 5219678 3'utr tkv FlyBase G7774.1 TGTGCCAGCTTTTGTACGCTTTAACTAA 11 5219665 0.663212313 5 10 91 0.909090909 1 0.272727273 0 0 11 1 0 10 2L:5219651-5219678 7 tkv FBtr0079087|FBtr0079089|FBtr0079088|FBtr0079086 5218998|5218998|5218998|5218998 5220092|5220092|5220092|5220092 TACGCTT 7mer-m8 dme-miR-965-3p 2L - 5219651 5219676 3'utr tkv FlyBase G6050.1 TGCCAGCTTTTGTACGCTTTAACTAA 5 5219664 0.629195756 4 5 37 1 0.903089987 0 0.6 0.75 5 0 0 8 2L:5219651-5219676 7 7.5 663 FBgn0003716 310.6566667 12.88 19.87333333 0.024142408 0.582298137 0.377390138 1 0 0.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 2L 5272052 5272057 - 2L_5272052_5272057_- 0.47859336 0.707850423 0.593221892 0.162109179 Bsg25D FBtr0079085|FBtr0310625|FBtr0310624|FBtr0302568|FBtr0079084 5271726|5271726|5271726|5271726|5271726 5272677|5272677|5272677|5272677|5272677 2L - 5272032 5272091 3'utr Bsg25D FlyBase G7786.2 TATTGATAGAGAAAATGGAAATGAGCGTAAAAAATGATCTATGATATTGATATTGATGTA 69 5272076 0.940221704 8 66 327 0.951807229 1.897627091 0.493975904 0.144927536 0.289156627 69 4 0 79 2L:5272032-5272091 6 Bsg25D FBtr0302568|FBtr0079084|FBtr0310624|FBtr0310625|FBtr0079085 5271726|5271726|5271726|5271726|5271726 5272677|5272677|5272677|5272677|5272677 TGATCT 6mer3-8 dme-bantam-3p 2L - 5272030 5272100 3'utr Bsg25D FlyBase G6059.1 TGTTAATTTTATTGATAGAGAAAATGGAAATGAGCGTAAAAAATGATCTATGATATTGATATTGATGTAAT 66 5272056 0.959924864 7 64 340 0.989583333 1.977723605 0.416666667 0.363636364 0.5625 66 1 0 95 2L:5272030-5272100 6 40 664 FBgn0000228 499.75 17.04333333 26.20333333 0.08004002 2.346958733 1.526523343 19 -1 9 0.1 dme-bantam-3p 6mer2-7 GATCTC 2L 5310099 5310104 + 2L_5310099_5310104_+ 1 1 1 0 vri FBtr0079071|FBtr0342936|FBtr0079070|FBtr0346579|FBtr0300020 5309719|5309719|5309719|5309719|5309719 5310996|5310996|5310625|5311223|5310610 2L + 5310045 5310223 3'utr vri FlyBase G2053.1 ATGTTTATCTATCCACTGTATTGAGTCTTGTAATCGTGAATGTTTAACTATATAGATCTCGTCAACTCGGAGCTAAAAAAAAATCCTTAGGGTCAGCCCAAAAGAATTTCTAATTTAACCTGTTTGTTGTATACACACAAGCTATTTGTTTGCATAGCTAGCTGGTGACCTGCGATGAG 122 5310096 0.927326496 32 104 917 0.854304636 1.156347201 0.178807947 0.18852459 0.344370861 122 14 8 129 2L:5310045-5310223 6 vri FBtr0346579|FBtr0300020|FBtr0342936|FBtr0079070|FBtr0079071 5309719|5309719|5309719|5309719|5309719 5311223|5310610|5310996|5310625|5310996 GATCTC 6mer2-7 dme-bantam-3p 2L + 5310036 5310186 3'utr vri FlyBase G1632.1 TCTGTGTGTATGTTTATCTATCCACTGTATTGAGTCTTGTAATCGTGAATGTTTAACTATATAGATCTCGTCAACTCGGAGCTAAAAAAAAATCCTTAGGGTCAGCCCAAAAGAATTTCTAATTTAACCTGTTTGTTGTATACACACAAGC 73 5310106 0.987533168 21 68 605 0.946902655 2.029383778 0.061946903 0.369863014 0.592920354 73 6 0 107 2L:5310036-5310186 6 59.5 665 FBgn0016076 178.9966667 5.846666667 8.973333333 0.332408425 10.17673888 6.630757801 3 -7 -2 0.1 dme-miR-970-3p 7mer-m8 TCTTATG 2L 5310253 5310259 + 2L_5310253_5310259_+ 0.651736134 0.658359943 0.655048038 0.004683734 vri FBtr0079071|FBtr0342936|FBtr0079070|FBtr0346579|FBtr0300020 5309719|5309719|5309719|5309719|5309719 5310996|5310996|5310625|5311223|5310610 2L + 5310224 5310359 3'utr vri FlyBase G2054.1 CATCGGGGTCACCAGCCACGTTATTGTTCTCTTATGCATCCCAAGTTTCCTTATGCACAGCGAAAGTGGAGAAGATAAAGAATTATTATGTTTGTAAGCAAACGTTACAAAGTATTTGCTGTTGTACATATTACAC 63 5310247 0.837967263 19 60 538 0.961038961 1.86923172 0.233766234 0.158730159 0.311688312 63 3 0 74 2L:5310224-5310359 7 vri FBtr0346579|FBtr0300020|FBtr0342936|FBtr0079070|FBtr0079071 5309719|5309719|5309719|5309719|5309719 5311223|5310610|5310996|5310625|5310996 TCTTATG 7mer-m8 dme-miR-970-3p 2L + 5310191 5310286 3'utr vri FlyBase G1633.1 TGTTTGCATAGCTAGCTGGTGACCTGCGATGAGCATCGGGGTCACCAGCCACGTTATTGTTCTCTTATGCATCCCAAGTTTCCTTATGCACAGCGA 28 5310256 0.895660876 10 26 219 0.947368421 1.556302501 0.289473684 0.214285714 0.421052632 28 2 0 36 2L:5310191-5310286 7 21 666 FBgn0016076 178.9966667 5.846666667 8.973333333 0.11732062 3.591790194 2.340267459 6 -3 1.5 0.1 dme-miR-2535b-3p 7mer-A1 CGTGAGA 2L 5310551 5310557 + 2L_5310551_5310557_+ 0.781567049 0.782869235 0.782218142 0.000920794 vri FBtr0079071|FBtr0342936|FBtr0079070|FBtr0346579|FBtr0300020 5309719|5309719|5309719|5309719|5309719 5310996|5310996|5310625|5311223|5310610 2L + 5310503 5310589 3'utr vri FlyBase G2057.1 AACAAACATATACATTACACTTAAGAAACGCGTGAAGCACATTCAAAACGTGAGAGATGAAAGAAATCTGAAAAGAATTGATGAATA 190 5310560 0.855065786 12 144 678 0.763285024 1.084713735 0.236714976 0.08994709 0.169082126 189 37 12 158 2L:5310503-5310589 7 vri FBtr0346579|FBtr0300020|FBtr0342936|FBtr0079070|FBtr0079071 5309719|5309719|5309719|5309719|5309719 5311223|5310610|5310996|5310625|5310996 CGTGAGA 7mer-A1 dme-miR-2535b-3p 2L + 5310506 5310586 3'utr vri FlyBase G1636.1 AAACATATACATTACACTTAAGAAACGCGTGAAGCACATTCAAAACGTGAGAGATGAAAGAAATCTGAAAAGAATTGATGA 105 5310560 0.805005433 10 81 358 0.773584906 1.390935107 0.352201258 0.380952381 0.591194969 105 32 4 123 2L:5310506-5310586 7 131.5 667 FBgn0016076 178.9966667 5.846666667 8.973333333 0.734650552 22.49144812 14.65453195 -9 -9 -9 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2L 5316842 5316848 - 2L_5316842_5316848_- 0.823348153 0.823346226 0.823347189 1.41E-06 Ncoa6 FBtr0329969|FBtr0307041|FBtr0307040 5315424|5315288|5316236 5317209|5317812|5317812 2L - 5316764 5316874 3'utr Ncoa6 FlyBase G7816.1 AAAATCCACCCATTGGAAATGATTTGCTAGTCATGTGAAACAGGCAATTTAATGTATAGCTCAGAAGATGAAATTTGAACAAATTAGTTGAGTAACGTATTTGAGAAGCTC 165 5316851 0.985201458 14 156 1263 0.936585366 1.806179974 0.224390244 0.206060606 0.36097561 165 11 2 192 2L:5316764-5316874 7 Ncoa6 FBtr0307040|FBtr0307041|FBtr0329969 5316236|5315288|5315424 5317812|5317812|5317209 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 5316829 5316886 3'utr Ncoa6 FlyBase G6078.2 TTACTCCCCAAAAAAATCCACCCATTGGAAATGATTTGCTAGTCATGTGAAACAGGCA 124 5316851 0.655334878 10 119 918 0.975247525 2.294466226 0.267326733 0.451612903 0.663366337 124 5 0 197 2L:5316829-5316886 7 134 668 FBgn0031698 1745.396667 21.13666667 32.68333333 0.076773379 6.339694055 4.099949006 3 3 3 0.1 dme-miR-965-3p 6mer2-7 ACGCTT 2L 5317152 5317157 - 2L_5317152_5317157_- 0.975486198 0.978482716 0.976984457 0.002118845 Ncoa6 FBtr0329969|FBtr0307041|FBtr0307040 5315424|5315288|5316236 5317209|5317812|5317812 2L - 5317095 5317230 stop_codon Ncoa6 FlyBase G7817.1 AGCTCACCGCAGCTGGCGTAGTGGAGTCGGATTACGGACGGCTACTTGTATATATCACACGCACTGATACCGAACGCTTTCGTTTGTAGTTCTTAGCCCTAGTTTCCGTTGAGGATTATTTTGTATAGTTAGTGGT 47 5317165 0.981013464 16 41 325 0.892857143 1.698970004 0.160714286 0.127659574 0.267857143 47 6 0 50 2L:5317095-5317230 6 Ncoa6 FBtr0307040|FBtr0307041|FBtr0329969 5316236|5315288|5315424 5317812|5317812|5317209 ACGCTT 6mer2-7 dme-miR-965-3p 2L - 5317110 5317223 stop_codon Ncoa6 FlyBase G6079.1 CGCAGCTGGCGTAGTGGAGTCGGATTACGGACGGCTACTTGTATATATCACACGCACTGATACCGAACGCTTTCGTTTGTAGTTCTTAGCCCTAGTTTCCGTTGAGGATTATTT 40 5317164 0.979651676 15 36 255 0.910714286 1.707570176 0.089285714 0.3 0.5 40 5 0 51 2L:5317110-5317223 6 25 669 FBgn0031698 1745.396667 21.13666667 32.68333333 0.014323392 1.182778742 0.764915859 8 7 7.5 0.1 dme-miR-305-3p 6mer2-7 TGTGCC 2L 5317440 5317445 - 2L_5317440_5317445_- 0.999837386 0.999826849 0.999832118 7.50E-06 Ncoa6 FBtr0307041|FBtr0307040 5315288|5316236 5317812|5317812 2L - 5317421 5317460 3'utr Ncoa6 FlyBase G7819.1 ACGATGAGTTCAATCTGTGCCTGAACAACATCCTCAGCGA 45 5317445 0.756474061 2 44 259 0.980769231 1.707570176 0.423076923 0.111111111 0.230769231 45 1 0 51 2L:5317421-5317460 6 Ncoa6 FBtr0307040|FBtr0307041 5316236|5315288 5317812|5317812 TGTGCC 6mer2-7 dme-miR-305-3p 2L - 5317421 5317544 3'utr Ncoa6 FlyBase G6080.1 GTGCCGCGGATGTTGAGGTGGATGAGGTGCTGATGCCGGAGCTGGACAATGCCACGGCCTTGGACTGCGCCAGCTTTGTCGACTACGATGAGTTCAATCTGTGCCTGAACAACATCCTCAGCGA 29 5317445 0.964938233 10 29 158 1 1.633468456 0.372093023 0.379310345 0.581395349 29 0 0 43 2L:5317421-5317544 6 31.5 670 FBgn0031698 1745.396667 21.13666667 32.68333333 0.018047473 1.490301214 0.963793983 0 0 0 0.1 dme-miR-968-5p 7mer-A1 CTACTTA 2L 541672 541678 - 2L_541672_541678_- 0.421786208 0.331271268 0.376528738 0.0640037 lwr FBtr0310029|FBtr0078081|FBtr0078082 541391|541391|541235 541767|541767|541767 2L - 541639 541727 5'utr lwr FlyBase G6621.1 AAATACACACATCTAGCCGGTAAGCGTTTGTTTGGAATGCTCTCCACGTCTACTTACTTTTAAAGAATCGACTAATTTTGGATAGCCCC 28 541652 0.823710318 13 27 178 0.973684211 1.568201724 0.026315789 0.285714286 0.473684211 28 1 0 37 2L:541639-541727 7 lwr FBtr0078082|FBtr0310029|FBtr0078081 541235|541391|541391 541767|541767|541767 CTACTTA 7mer-m8 dme-miR-1002-5p 2L - 541639 541725 5'utr lwr FlyBase G5178.1 ATACACACATCTAGCCGGTAAGCGTTTGTTTGGAATGCTCTCCACGTCTACTTACTTTTAAAGAATCGACTAATTTTGGATAGCCCC 23 541652 0.737820399 14 22 163 0.967741935 1.176091259 0 0.304347826 0.483870968 23 0 1 30 2L:541639-541725 7 6 671 FBgn0010602 1112.636667 123.4966667 188.6266667 0.005392596 0.048584307 0.031808864 -26 -26 -26 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2L 5539598 5539603 - 2L_5539598_5539603_- 0.960848599 0.844888698 0.902868648 0.081996032 Hel25E FBtr0079125|FBtr0079124|FBtr0079123|FBtr0331676 5539324|5539495|5539324|5539492 5539630|5539630|5539630|5540779 2L - 5539561 5539616 3'utr Hel25E FlyBase G7885.1 TGTTAATCGGAACAAGACTATGCACTTCGAATAGATACAAACCTAAAACCTTTTTT 38 5539596 0.784436141 8 37 168 0.977272727 1.633468456 0.113636364 0.105263158 0.227272727 38 1 0 43 2L:5539561-5539616 6 Hel25E FBtr0331676 5539492 5540779 AAGACT 6mer3-8 dme-miR-14-3p 2L - 5539555 5539616 3'utr Hel25E FlyBase G6124.1 TGTTAATCGGAACAAGACTATGCACTTCGAATAGATACAAACCTAAAACCTTTTTTAAAACT 35 5539596 0.742140791 7 32 169 0.903225806 1.748188027 0.096774194 0.485714286 0.709677419 35 6 0 56 2L:5539555-5539616 6 27.5 672 FBgn0014189 1923.333333 131.82 201.5566667 0.014298094 0.208617812 0.136438057 -7 -7 -7 0.1 dme-bantam-3p 6mer2-7 GATCTC 2L 5539717 5539722 - 2L_5539717_5539722_- 0.999992513 0.999212986 0.999602749 0.00055119 Hel25E FBtr0331676 5539492 5540779 2L - 5539709 5539827 5'utr Hel25E FlyBase G7886.1 AAGGGACTGGCAATCACATTCGTTTCGGACGAGAACGACGCCAAGATACTTAACGAAGTACAGGATCGTTTCGATGTGAACATCAGTGAGCTGCCCGAGGAAATCGATCTCTCTACATA 49 5539715 0.958529738 10 45 220 0.923076923 1.681241237 0.442307692 0.06122449 0.115384615 49 4 0 48 2L:5539709-5539827 6 Hel25E FBtr0331676 5539492 5540779 GATCTC 6mer2-7 dme-bantam-3p 2L - 5539707 5539792 5'utr Hel25E FlyBase G6125.1 CGACGCCAAGATACTTAACGAAGTACAGGATCGTTTCGATGTGAACATCAGTGAGCTGCCCGAGGAAATCGATCTCTCTACATACA 38 5539715 0.954799446 10 34 156 0.944444444 1.40654018 0.481481481 0.289473684 0.5 38 2 1 51 2L:5539707-5539792 6 28 673 FBgn0014189 1923.333333 131.82 201.5566667 0.014558059 0.212410863 0.138918749 -7 -7 -7 0.1 dme-miR-2a-2-5p 7mer-m1 GATGAGG 2L 5540273 5540279 - 2L_5540273_5540279_- 0.825458244 0.825462534 0.825460389 3.04E-06 Hel25E FBtr0331676 5539492 5540779 2L - 5540250 5540294 5'utr Hel25E FlyBase G7890.1 GAGGTCTACGTCGACGATGAGGCCAAGCTGACGCTGCACGGACTG 47 5540277 0.983732888 3 45 133 0.963636364 1.72427587 0.145454545 0.127659574 0.254545455 47 2 0 53 2L:5540250-5540294 7 Hel25E FBtr0331676 5539492 5540779 GATGAGG 7mer-m1 dme-miR-2a-2-5p 2L - 5540251 5540294 5'utr Hel25E FlyBase G6129.2 GAGGTCTACGTCGACGATGAGGCCAAGCTGACGCTGCACGGACT 32 5540277 0.974804876 4 29 69 1 1.672097858 0.042553191 0.375 0.574468085 32 0 0 47 2L:5540251-5540294 7 36 674 FBgn0014189 1923.333333 131.82 201.5566667 0.018717504 0.273099681 0.17860982 -2 -2 -2 0.1 dme-miR-304-5p 6mer2-7 GAGATT 2L 5545619 5545624 + 2L_5545619_5545624_+ 0.999999757 0.999999489 0.999999623 2.12E-07 Lam FBtr0307058|FBtr0079100|FBtr0307059|FBtr0346460 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 2L + 5545565 5545631 3'utr Lam FlyBase G2114.1 AAGCACACACGAAGATCATAATTTAGAACCCAAAAACACACACACCGAGGTACAGAGATTTATTATT 14 5545628 0.965716974 6 13 66 0.882352941 1.176091259 0.058823529 0.214285714 0.352941176 14 2 0 15 2L:5545565-5545631 6 Lam FBtr0307059|FBtr0346460|FBtr0307058|FBtr0079100 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 GAGATT 6mer2-7 dme-miR-304-5p 2L + 5545601 5545635 3'utr Lam FlyBase G1680.2 CACACACACCGAGGTACAGAGATTTATTATTCAGC 8 5545627 0.968723613 4 7 43 0.916666667 1.041392685 0 0.375 0.583333333 8 1 0 11 2L:5545601-5545635 6 9 675 FBgn0002525 6943.616667 266.97 409.4166667 0.001296155 0.033711653 0.021982495 -9 -8 -8.5 0.1 dme-miR-980-5p 7mer-A1 AAAAACA 2L 5545675 5545681 + 2L_5545675_5545681_+ 0.43880837 0.44703207 0.44292022 0.005815034 Lam FBtr0307058|FBtr0079100|FBtr0307059|FBtr0346460 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 2L + 5545657 5545706 3'utr Lam FlyBase G2115.1 AGCGCCAATTATTTAATCAAAAACATTTGTGTAGAAGACATCCTGAATCT 15 5545683 0.975726008 6 13 82 0.882352941 1.176091259 0.176470588 0.133333333 0.235294118 15 2 0 15 2L:5545657-5545706 7 Lam FBtr0307059|FBtr0346460|FBtr0307058|FBtr0079100 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 AAAAACA 7mer-A1 dme-miR-980-5p 2L + 5545665 5545711 3'utr Lam FlyBase G1681.1 TTATTTAATCAAAAACATTTGTGTAGAAGACATCCTGAATCTTCGTT 11 5545683 0.729647781 5 10 71 0.941176471 0.903089987 0.411764706 0.363636364 0.588235294 11 0 1 16 2L:5545665-5545711 7 9.5 676 FBgn0002525 6943.616667 266.97 409.4166667 0.001368163 0.035584523 0.023203745 -8 -8 -8 0.1 dme-miR-282-5p 6mer3-8 AGAGGC 2L 5545826 5545831 + 2L_5545826_5545831_+ 0.999812056 0.994150173 0.996981114 0.004003568 Lam FBtr0307058|FBtr0079100|FBtr0307059|FBtr0346460 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 2L + 5545799 5545842 3'utr Lam FlyBase G2116.1 TTGTAAACTTTATTTGGTATAAACTGGAGAGGCATGTTGCCTCT 10 5545823 0.948553343 4 10 78 1 1.113943352 0.153846154 0.2 0.384615385 10 0 0 13 2L:5545799-5545842 6 Lam FBtr0307059|FBtr0346460|FBtr0307058|FBtr0079100 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 AGAGGC 6mer3-8 dme-miR-282-5p 2L + 5545799 5545840 3'utr Lam FlyBase G1682.1 TTGTAAACTTTATTTGGTATAAACTGGAGAGGCATGTTGCCT 6 5545823 0.946002277 2 5 47 0.777777778 0.84509804 0.111111111 0.5 0.666666667 6 2 0 7 2L:5545799-5545840 6 6.5 677 FBgn0002525 6943.616667 266.97 409.4166667 0.000936112 0.024347305 0.015876247 3 3 3 0.1 dme-miR-252-5p 7mer-m8 GTACTTA 2L 5545939 5545945 + 2L_5545939_5545945_+ 0.552583556 0.583625155 0.568104356 0.021949726 Lam FBtr0307058|FBtr0079100|FBtr0307059|FBtr0346460 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 2L + 5545924 5546007 3'utr Lam FlyBase G2118.1 AACAATATTTTCGATGTACTTACGCTCCACCTACATATTTAGTAAATTAGTTTTTAAGCTATATCCCAGATAAACCAGTCGACG 11 5545938 0.985453426 6 10 91 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 2L:5545924-5546007 7 Lam FBtr0307059|FBtr0346460|FBtr0307058|FBtr0079100 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 GTACTTA 7mer-m8 dme-miR-252-5p 2L + 5545927 5545958 3'utr Lam FlyBase G1684.1 AATATTTTCGATGTACTTACGCTCCACCTACA 5 5545940 0.966843465 2 4 29 1 0.84509804 0 0.2 0.428571429 5 0 0 7 2L:5545927-5545958 7 6 678 FBgn0002525 6943.616667 266.97 409.4166667 0.000864103 0.022474435 0.014654997 1 -1 0 0.1 dme-miR-1007-3p 7mer-m8 TGAGCTT 2L 5546305 5546311 + 2L_5546305_5546311_+ 0.620203442 0.620203392 0.620203417 0 Lam FBtr0307058|FBtr0079100|FBtr0307059|FBtr0346460 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 2L + 5546239 5546358 3'utr Lam FlyBase G2121.1 TTTTTAGCCATGGCCATAGGGTTTACGATCCACCAAAACGGCTTTCTCCCGGTTTAGACCGGTTCTTGAGCTTCCTGCAGACATTTTACCGGACGAGCAACAATAAGAACAGCAACAACA 28 5546314 0.999960449 12 26 176 0.90625 0.860338007 0.03125 0.142857143 0.25 28 0 3 29 2L:5546239-5546358 7 Lam FBtr0307059|FBtr0346460|FBtr0307058|FBtr0079100 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 TGAGCTT 7mer-m8 dme-miR-1007-3p 2L + 5546283 5546339 3'utr Lam FlyBase G1687.1 TCTCCCGGTTTAGACCGGTTCTTGAGCTTCCTGCAGACATTTTACCGGACGAGCAAC 13 5546324 0.980947938 9 12 87 0.933333333 1.146128036 0.4 0.153846154 0.266666667 13 1 0 14 2L:5546283-5546339 7 11 679 FBgn0002525 6943.616667 266.97 409.4166667 0.001584189 0.041203131 0.026867494 -9 -19 -14 0.1 dme-miR-980-5p 7mer-m1 AAAAACT 2L 5546538 5546544 + 2L_5546538_5546544_+ 0.705646897 0.746437676 0.726042287 0.028843451 Lam FBtr0307058|FBtr0079100|FBtr0307059|FBtr0346460 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 2L + 5546421 5546574 3'utr Lam FlyBase G2122.1 ACGAAAGAAAATGGAAGTACACGTAGCGGCTCAGCGATCCGTCGCATTTTTTATGGGTGGGCGTGGTCGCGTTTTACGCCGGCCAAACAAATGCAACGCCCACACAGACTATTATACAAAAACTGATGAATACAACTAAATTTTAAGTACATCT 68 5546547 0.999986213 15 61 384 0.904109589 1.819543936 0.04109589 0.073529412 0.136986301 68 7 0 66 2L:5546421-5546574 7 Lam FBtr0307059|FBtr0346460|FBtr0307058|FBtr0079100 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 AAAAACT 7mer-m1 dme-miR-980-5p 2L + 5546512 5546571 3'utr Lam FlyBase G1690.1 TGCAACGCCCACACAGACTATTATACAAAAACTGATGAATACAACTAAATTTTAAGTACA 45 5546547 0.970508596 8 42 243 0.938461538 1.484299839 0.015384615 0.377777778 0.569230769 45 3 1 61 2L:5546512-5546571 7 34.5 680 FBgn0002525 6943.616667 266.97 409.4166667 0.004968592 0.129228003 0.084266232 -9 -9 -9 0.1 dme-bantam-3p 6mer3-8 TGATCT 2L 572735 572740 + 2L_572735_572740_+ 1 0.975347144 0.987673572 0.017432233 CG2807 FBtr0332340 572649 572907 2L + 572725 572780 3'utr CG2807 FlyBase G878.1 TGTTCTTAATTGATCTTTCCTGCCGTAAAATACAGAAAATCATTGGATCTTCAATT 16 572740 0.707135701 7 16 131 1 1.278753601 0.105263158 0.1875 0.315789474 16 0 0 19 2L:572725-572780 6 CG2807 FBtr0332340 572649 572907 TGATCT 6mer3-8 dme-bantam-3p 2L + 572725 572782 3'utr CG2807 FlyBase G704.1 TGTTCTTAATTGATCTTTCCTGCCGTAAAATACAGAAAATCATTGGATCTTCAATTAT 10 572741 0.985943312 3 8 72 0.928571429 0.812913357 0.071428571 0.3 0.5 10 0 1 13 2L:572725-572782 6 10 681 FBgn0031266 921 26.72666667 40.98 0.010857763 0.374158144 0.244021474 -5 -6 -5.5 0.1 dme-miR-184-3p 7mer-A1 CCGTCCA 2L 575294 575300 + 2L_575294_575300_+ 0.819928474 0.823349491 0.821638982 0.002419012 cold FBtr0310022|FBtr0078069 575235|575235 575734|575734 2L + 575242 575330 3'utr cold FlyBase G882.1 AGAGCCTTTGCTATACCAAGCACATTTCGCTTTTTGTATTATTTAAACGAAGCCGTCCATAAGCTAAGTAGATTCCACACTCCATTTAA 133 575301 0.800175826 19 115 820 0.858108108 1.802773725 0.222972973 0.090225564 0.182432432 133 20 1 127 2L:575242-575330 7 cold FBtr0310022|FBtr0078069 575235|575235 575734|575734 CCGTCCA 7mer-A1 dme-miR-184-3p 2L + 575241 575373 3'utr cold FlyBase G706.1 AAGAGCCTTTGCTATACCAAGCACATTTCGCTTTTTGTATTATTTAAACGAAGCCGTCCATAAGCTAAGTAGATTCCACACTCCATTTAAAACTACACCGTCAAAGTGCCTTGACTCAGTTGGGAAGTAATGC 97 575301 0.840128125 20 85 605 0.888111888 1.626682466 0.27972028 0.350515464 0.559440559 97 14 2 127 2L:575241-575373 7 84.5 682 FBgn0031268 127.6166667 15.33333333 23.50333333 0.662139219 5.510869565 3.595234718 -7 -7 -7 0.1 dme-miR-968-5p 6mer3-8 ACTACT 2L 5767057 5767062 - 2L_5767057_5767062_- 0.988806211 0.989603923 0.989205067 0.000564059 CG9171 FBtr0301235 5767000 5769315 2L - 5767042 5767188 3'utr CG9171 FlyBase G7897.1 AGGATTTATAACTAATTTGACTAGAAGTCCTTGATCGTAAAATTTAGATTTACACATATTTCAAGAACGCCTCATATGTCCAAATAAAAATGTTTTAATAGGTAATTGCAACTCTGCTGAGCATGGACTACTAGCTAAAACCTAAGG 408 5767065 0.917980231 17 399 2171 0.984189723 2.396199347 0.205533597 0.191176471 0.347826087 408 7 1 498 2L:5767042-5767188 6 CG9171 FBtr0301235 5767000 5769315 ACTACT 6mer3-8 dme-miR-968-5p 2L - 5767041 5767089 3'utr CG9171 FlyBase G6135.1 AGGTAATTGCAACTCTGCTGAGCATGGACTACTAGCTAAAACCTAAGGA 228 5767065 0.912122935 6 228 1120 1 2.562292864 0.298630137 0.434210526 0.646575342 228 0 0 365 2L:5767041-5767089 6 301.5 683 FBgn0031738 813.1933333 26.58333333 40.79333333 0.370760541 11.34169279 7.390913548 3 3 3 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 5767760 5767765 - 2L_5767760_5767765_- 0.977640433 0.999914649 0.988777541 0.015750238 CG9171 FBtr0332038|FBtr0301235|FBtr0332039 5767590|5767000|5767590 5769315|5769315|5769315 2L - 5767558 5767780 3'utr CG9171 FlyBase G7901.1 TGATGTACGTTTTCGATGTGACTTGGGAACAACATACAACAATTGGTGTTTGTATAATTACATAAGCCTTGATTCCGCTGATATCATGTTTGCAAATCAAGTCTTCGCTCAAAAATTGATTTAATTGCATATTTTCCATTCGTAAGACTAAAATATCACTAAACATAATAAAAATGTTGAAAATGTAGCTAAGAGCAGAATTAAAATATAATTAGAATACAAC 69 5767758 0.98106772 25 66 482 0.977272727 1.934498451 0.136363636 0.217391304 0.386363636 69 2 0 86 2L:5767558-5767780 6 CG9171 FBtr0332039|FBtr0332038|FBtr0301235 5767590|5767590|5767000 5769315|5769315|5769315 ATGTGA 6mer3-8 dme-miR-1003-3p 2L - 5767544 5767780 3'utr CG9171 FlyBase G6138.1 TGATGTACGTTTTCGATGTGACTTGGGAACAACATACAACAATTGGTGTTTGTATAATTACATAAGCCTTGATTCCGCTGATATCATGTTTGCAAATCAAGTCTTCGCTCAAAAATTGATTTAATTGCATATTTTCCATTCGTAAGACTAAAATATCACTAAACATAATAAAAATGTTGAAAATGTAGCTAAGAGCAGAATTAAAATATAATTAGAATACAACAATTTGAATTAAAG 62 5767758 0.982942839 23 58 438 0.943820225 1.62324929 0.314606742 0.306451613 0.516853933 62 4 1 84 2L:5767544-5767780 6 19.5 684 FBgn0031738 813.1933333 26.58333333 40.79333333 0.023979537 0.73354232 0.478019284 -7 -7 -7 0.1 dme-miR-2535b-3p 6mer3-8 CCGTGA 2L 5768145 5768150 - 2L_5768145_5768150_- 0.56664788 0.566796889 0.566722384 0.000105359 CG9171 FBtr0332038|FBtr0301235|FBtr0332039 5767590|5767000|5767590 5769315|5769315|5769315 2L - 5768094 5768477 3'utr CG9171 FlyBase G7903.1 AATGTTTTTTGGGCAATGTAGACTTACTGCAAAGACCAAAATTTAGATTAGACCGATACCGGGCCAAAACAATTCCAACGTTAAATATTTGACTTGATTAGCAGAGTAGGAATCATTGAATTGAAACGTATTAAATAGACTTTGAGAGTTAAAGCGTAATAGTAATAATGATAAAGACAAGTTTCAAACAAAAAAAAACACAATTACTATTAAAATTTATACAAGAAACACACACATTGAGAATTGATTTGTTTACTTACCGCACTGAATGGTAGGCAGAGCAATTAATGCGATTGAAGATTACATTTCAATAAGCATAAATGCGAACCGTGATATTTGTACTAGTAAAGCGATTTGGAGATGTTAAACCTATTTGATAAGAAA 2013 5768156 0.991709654 71 1971 13379 0.98003992 2.544953456 0.097804391 0.184798808 0.34491018 2013 44 6 2455 2L:5768094-5768477 6 CG9171 FBtr0332039|FBtr0332038|FBtr0301235 5767590|5767590|5767000 5769315|5769315|5769315 CCGTGA 6mer3-8 dme-miR-2535b-3p 2L - 5768042 5768253 3'utr CG9171 FlyBase G6142.1 GAAACACACACATTGAGAATTGATTTGTTTACTTACCGCACTGAATGGTAGGCAGAGCAATTAATGCGATTGAAGATTACATTTCAATAAGCATAAATGCGAACCGTGATATTTGTACTAGTAAAGCGATTTGGAGATGTTAAACCTATTTGATAAGAAATGAGTGGGCGACGATCAAAAGGAAAGATCAGAGACCCATATGCATTAAACTT 941 5768156 0.960373701 36 929 5839 0.986256545 2.576053261 0.042539267 0.397449522 0.628926702 941 18 3 1507 2L:5768042-5768253 6 994 685 FBgn0031738 813.1933333 26.58333333 40.79333333 1.222341551 37.39184953 24.36672659 6 6 6 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 2L 5768512 5768517 - 2L_5768512_5768517_- 0.999760129 0.999999997 0.999880063 0.000169635 CG9171 FBtr0332038|FBtr0301235|FBtr0301236|FBtr0301234|FBtr0332039 5767590|5767000|5768251|5768251|5767590 5769315|5769315|5769315|5769315|5769315 2L - 5768478 5768629 3'utr CG9171 FlyBase G7904.1 ATTGGATATTCTTTTCAAAATACTCAAAAAGAGAAATTGAGAGCAACATTATTTTCGTATACCGGGGCGAGTTTCCTAGACATCAGCAAAACAAACAGTCTTACCACTTTTTTGTGTTTTATATATTTCCGCATTAAAGGCATAGATTAAAC 31 5768518 0.986638151 12 30 256 0.96875 1.491361694 0.03125 0.032258065 0.0625 31 1 0 31 2L:5768478-5768629 6 CG9171 FBtr0332039|FBtr0301236|FBtr0301234|FBtr0332038|FBtr0301235 5767590|5768251|5768251|5767590|5767000 5769315|5769315|5769315|5769315|5769315 TGTGTT 6mer3-8 dme-miR-317-3p 2L - 5768495 5768533 3'utr CG9171 FlyBase G6144.1 AGTCTTACCACTTTTTTGTGTTTTATATATTTCCGCATT 5 5768518 0.982122955 4 5 69 1 1 0 0.6 0.8 5 0 0 10 2L:5768495-5768533 6 6.5 686 FBgn0031738 813.1933333 26.58333333 40.79333333 0.007993179 0.244514107 0.159339761 1 1 1 0.1 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 5800817 5800824 - 2L_5800817_5800824_- 0.499920861 0.588115295 0.544018078 0.062362858 CG14005 FBtr0079160 5800515 5800869 2L - 5800700 5800859 coding-3'utr CG14005 FlyBase G7919.1 TAGCACCACGTGGTAAGGACATTGTATGACAGCTTTAGCTTTAAGTTGGGAATAGAGTCGCGGCGCTCGACCCTGTGTATGTTTTTCAATTCGTTCCTTTCTCAGACACAGATGTCTAATTCACTCGACGTACAAAGCAGCAGCATAGCGAACCGAAGAT 105 5800825 0.999996235 14 100 964 0.96124031 1.792391689 0.186046512 0.19047619 0.341085271 105 4 1 124 2L:5800700-5800859 8 CG14005 FBtr0079160 5800515 5800869 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 5800788 5800870 stop_codon CG14005 FlyBase G6159.1 ATCCCGACTACTAGCACCACGTGGTAAGGACATTGTATGACAGCTTTAGCTTTAAGTTGGGAATAGAGTCGCGGCGCTCGACC 55 5800825 0.989660082 6 52 502 0.957746479 1.832508913 0.183098592 0.2 0.38028169 55 3 0 68 2L:5800788-5800870 8 67 687 FBgn0031739 237 20.57 31.17666667 0.282700422 3.257170637 2.149043088 1 1 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2L 5921394 5921400 + 2L_5921394_5921400_+ 0.671583798 0.671211256 0.671397527 0.000263397 bchs FBtr0079144 5921241 5922776 2L + 5921377 5921421 3'utr bchs FlyBase G2162.1 AAGTTATTTTTACTTCAACCAAAGGCTGTTATATGATTTTACACT 81 5921406 0.615073393 7 81 526 1 1.963787827 0.184782609 0.135802469 0.239130435 81 0 0 92 2L:5921377-5921421 7 bchs FBtr0079144 5921241 5922776 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L + 5921377 5921418 3'utr bchs FlyBase G1718.1 AAGTTATTTTTACTTCAACCAAAGGCTGTTATATGATTTTAC 59 5921406 0.617539291 9 59 385 1 1.986771734 0.12371134 0.423728814 0.649484536 59 0 0 97 2L:5921377-5921418 7 70 688 FBgn0043362 457.73 4.51 6.893333333 0.152928582 15.5210643 10.15473888 -12 -12 -12 0.1 dme-bantam-3p 6mer3-8 TGATCT 2L 5955067 5955072 + 2L_5955067_5955072_+ 0.972998211 0.984888599 0.978943405 0.008407782 CG9044 FBtr0333231|FBtr0273412 5955000|5955000 5955235|5955235 2L + 5955016 5955162 3'utr CG9044 FlyBase G2192.1 TAGAAAATTGAATATAGCCTGTACCAATTATTGTGCAAAGTTTAAAATTGTTGATCTTAATTGACTATGTTATTTAATGTCAGATTAGTTTTATTAACTTAGGCTAGAGCTTTCAATCAATAAGAAATGGTGCTGTACCACGATTTA 136 5955065 0.885226338 25 129 1131 0.935294118 1.50242712 0.123529412 0.205882353 0.364705882 136 7 4 159 2L:5955016-5955162 6 CG9044 FBtr0333231|FBtr0273412 5955000|5955000 5955235|5955235 TGATCT 6mer3-8 dme-bantam-3p 2L + 5955016 5955095 3'utr CG9044 FlyBase G1739.1 TAGAAAATTGAATATAGCCTGTACCAATTATTGTGCAAAGTTTAAAATTGTTGATCTTAATTGACTATGTTATTTAATGT 79 5955065 0.840761897 12 76 675 0.972972973 1.73239376 0.171171171 0.316455696 0.513513514 79 2 1 108 2L:5955016-5955095 6 62.5 689 FBgn0031752 511 13.98 21.38 0.122309198 4.470672389 2.923292797 2 2 2 0.1 dme-miR-184-5p 8mer-A1 TGATAAGA 2L 5973473 5973480 - 2L_5973473_5973480_- 0.601196645 0.601217564 0.601207104 1.48E-05 chic FBtr0079235|FBtr0309213|FBtr0079234|FBtr0079236 5972898|5973005|5972898|5972113 5973576|5973576|5973576|5973576 2L - 5973412 5973656 stop_codon chic FlyBase G7933.1 ACGAGGATCCCGTTCAGCCCCAGCAGGCCGCTTCCGTGGTAGAGAAACTTGGAGATTATCTGATTACTTGCGGGTACTAGGAGAATAGATCAACACAAACACCCCCATCAACCACAACAACAACAACACACACACACCAACAACTACAACTACAACAACAACAGCAGCAACAAATTTGATAAGAGCGAACCGTAAATGAACTAATAACACATAAAAAGTAATTATTAATATTTAAATTTATGGGA 90 5973481 0.964330644 25 84 434 0.935185185 1.305351369 0.259259259 0.166666667 0.305555556 90 3 4 101 2L:5973412-5973656 8 chic FBtr0079234|FBtr0079236|FBtr0079233|FBtr0309212|FBtr0079235|FBtr0309213 5972898|5972113|5973201|5973322|5972898|5973005 5973576|5973576|5973576|5973576|5973576|5973576 TGATAAGA 8mer-A1 dme-miR-184-5p 2L - 5973440 5973496 3'utr chic FlyBase G6171.1 ACAGCAGCAACAAATTTGATAAGAGCGAACCGTAAATGAACTAATAACACATAAAAA 19 5973481 0.932080192 7 19 74 1 1.431363764 0.148148148 0.263157895 0.481481481 19 0 0 27 2L:5973440-5973496 8 21 690 FBgn0000308 17707.58333 1966.28 3025.8 0.001185933 0.010680066 0.006940313 1 1 1 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC 2L 5990208 5990214 - 2L_5990208_5990214_- 0.661614645 0.661615308 0.661614976 4.95E-07 lid FBtr0307071|FBtr0345336 5989461|5989398 5990641|5990641 2L - 5990139 5990277 3'utr lid FlyBase G7940.1 AATTTTATAATATATTTTACCATTACCTGCTATTCTTAGTTTTTGTTAATTTAATTCACTTTTTGTGTTCGCCTCTCGAGTTTTGGTTCAGTGCGCACGCAAAGTTTTCTTACGTTTTATTTGACTTTTTCCTTTAATC 197 5990215 0.946594863 15 190 2416 0.969957082 1.655138435 0.060085837 0.137055838 0.270386266 197 3 4 226 2L:5990139-5990277 7 lid FBtr0307071|FBtr0345336 5989461|5989398 5990641|5990641 TGTGTTC 7mer-m8 dme-miR-317-3p 2L - 5990196 5990271 3'utr lid FlyBase G6180.1 ATAATATATTTTACCATTACCTGCTATTCTTAGTTTTTGTTAATTTAATTCACTTTTTGTGTTCGCCTCTCGAGTT 119 5990215 0.827908948 7 111 1396 0.943396226 1.574031268 0.006289308 0.277310924 0.459119497 119 6 3 150 2L:5990196-5990271 7 72 691 FBgn0031759 1960.226667 33.73333333 51.87 0.036730446 2.134387352 1.388085599 1 1 1 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2L 5990249 5990254 - 2L_5990249_5990254_- 0.999999504 0.944164168 0.972081836 0.039481519 lid FBtr0307071|FBtr0345336 5989461|5989398 5990641|5990641 2L - 5990139 5990277 3'utr lid FlyBase G7940.1 AATTTTATAATATATTTTACCATTACCTGCTATTCTTAGTTTTTGTTAATTTAATTCACTTTTTGTGTTCGCCTCTCGAGTTTTGGTTCAGTGCGCACGCAAAGTTTTCTTACGTTTTATTTGACTTTTTCCTTTAATC 197 5990255 0.946594863 15 190 2416 0.969957082 1.655138435 0.060085837 0.137055838 0.270386266 197 3 4 226 2L:5990139-5990277 6 lid FBtr0307071|FBtr0345336 5989461|5989398 5990641|5990641 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2L - 5990196 5990271 3'utr lid FlyBase G6180.1 ATAATATATTTTACCATTACCTGCTATTCTTAGTTTTTGTTAATTTAATTCACTTTTTGTGTTCGCCTCTCGAGTT 119 5990255 0.827908948 7 111 1396 0.943396226 1.574031268 0.006289308 0.277310924 0.459119497 119 6 3 150 2L:5990196-5990271 6 78.5 692 FBgn0031759 1960.226667 33.73333333 51.87 0.040046389 2.327075099 1.513398882 1 1 1 0.1 dme-miR-33-5p 7mer-A1 AATGCAA 2L 5990345 5990351 - 2L_5990345_5990351_- 0.782911823 0.782905984 0.782908903 4.10E-06 lid FBtr0307071|FBtr0345336 5989461|5989398 5990641|5990641 2L - 5990331 5990378 3'utr lid FlyBase G7942.1 GGATTAATAATTAAGCAAAAGATATGAAATGCAAACAAAGCAACACAA 13 5990350 0.90985326 5 13 37 1 1.204119983 0.25 0.230769231 0.375 13 0 0 16 2L:5990331-5990378 7 lid FBtr0307071|FBtr0345336 5989461|5989398 5990641|5990641 AATGCAA 7mer-A1 dme-miR-33-5p 2L - 5990335 5990371 3'utr lid FlyBase G6181.1 TAATTAAGCAAAAGATATGAAATGCAAACAAAGCAAC 6 5990354 0.935340308 2 5 16 0.909090909 1 0.181818182 0.5 0.727272727 6 1 0 10 2L:5990335-5990371 7 6.5 693 FBgn0031759 1960.226667 33.73333333 51.87 0.003315943 0.192687747 0.125313283 -1 3 1 0.1 dme-miR-968-5p 6mer3-8 ACTACT 2L 5990576 5990581 - 2L_5990576_5990581_- 0.999235439 0.994869928 0.997052684 0.003086875 lid FBtr0307071|FBtr0345336 5989461|5989398 5990641|5990641 2L - 5990543 5990670 stop_codon lid FlyBase G7943.1 AGCAGCGGGCGGTGCAATCGGCGCGGTAGAGTAACGTATATAGAGTCCAGGAGGTGCAGTAACAGCCGATTGTGTTTTACGCATGATGTACTACTAAATACCCGATAAAGGCCGTCTACCGGTATTTA 93 5990584 0.935817095 14 92 504 0.991666667 2.075546961 0.166666667 0.215053763 0.391666667 93 1 0 119 2L:5990543-5990670 6 lid FBtr0307071|FBtr0345336 5989461|5989398 5990641|5990641 ACTACT 6mer3-8 dme-miR-968-5p 2L - 5990563 5990651 stop_codon lid FlyBase G6182.1 GGCGCGGTAGAGTAACGTATATAGAGTCCAGGAGGTGCAGTAACAGCCGATTGTGTTTTACGCATGATGTACTACTAAATACCCGATAA 72 5990584 0.969101785 6 69 389 0.973451327 1.740362689 0.14159292 0.402777778 0.619469027 72 2 1 110 2L:5990563-5990651 6 70 694 FBgn0031759 1960.226667 33.73333333 51.87 0.035710156 2.075098814 1.349527665 3 3 3 0.1 dme-miR-184-3p 6mer3-8 TCCGTC 2L 6002231 6002236 + 2L_6002231_6002236_+ 0.990792974 0.989036642 0.989914808 0.001241962 Tsp26A FBtr0307300|FBtr0332600|FBtr0113024 6001736|6001736|6001736 6003738|6003738|6003738 2L + 6002214 6002288 3'utr Tsp26A FlyBase G2220.1 AACTAAAGCAAACGCATTCCGTCTTCGTGGACATTGACTAATATTAACTAGGTTGCCAAATTTGTTGCTGTTTTT 85 6002230 0.907424073 7 84 493 0.989795918 1.986771734 0.408163265 0.152941176 0.265306122 85 1 0 97 2L:6002214-6002288 6 Tsp26A FBtr0332600|FBtr0113024|FBtr0307300 6001736|6001736|6001736 6003738|6003738|6003738 TCCGTC 6mer3-8 dme-miR-184-3p 2L + 6002215 6002258 3'utr Tsp26A FlyBase G1770.1 ACTAAAGCAAACGCATTCCGTCTTCGTGGACATTGACTAATATT 53 6002230 0.910000636 3 50 278 0.987179487 1.58546073 0.448717949 0.384615385 0.58974359 52 0 1 77 2L:6002215-6002258 6 64 695 FBgn0031760 374.3466667 15.47666667 23.65666667 0.170964525 4.135257377 2.705368466 1 1 1 0.1 dme-miR-1008-3p 8mer-A1 AGCTGTGA 2L 6002422 6002429 + 2L_6002422_6002429_+ 0.435106959 0.546488544 0.490797752 0.078758614 Tsp26A FBtr0307300|FBtr0332600|FBtr0113024 6001736|6001736|6001736 6003738|6003738|6003738 2L + 6002409 6002448 3'utr Tsp26A FlyBase G2221.1 TATCTTGAAATGCAGCTGTGATATATTTTTAAAGAAAAGT 57 6002434 0.705512977 10 46 493 0.825 1.51851394 0.1125 0.263157895 0.475 57 13 1 66 2L:6002409-6002448 8 Tsp26A FBtr0332600|FBtr0113024|FBtr0307300 6001736|6001736|6001736 6003738|6003738|6003738 AGCTGTGA 8mer-A1 dme-miR-1008-3p 2L + 6002408 6002452 3'utr Tsp26A FlyBase G1771.1 TTATCTTGAAATGCAGCTGTGATATATTTTTAAAGAAAAGTATAG 52 6002435 0.961990547 11 47 484 0.9375 1.875061263 0.125 0.403846154 0.6125 52 5 0 75 2L:6002408-6002452 8 54.5 696 FBgn0031760 374.3466667 15.47666667 23.65666667 0.145586978 3.52143011 2.303790334 -12 -13 -12.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 6002839 6002844 + 2L_6002839_6002844_+ 1 1 1 0 Tsp26A FBtr0307300|FBtr0332600|FBtr0113024 6001736|6001736|6001736 6003738|6003738|6003738 2L + 6002817 6002860 3'utr Tsp26A FlyBase G2225.1 AGGAAAACATTGATTCGCTCTTGTACCTTTTTAAATCTATATTG 39 6002838 0.710189588 6 39 430 1 1.662757832 0.043478261 0.179487179 0.304347826 39 0 0 46 2L:6002817-6002860 6 Tsp26A FBtr0332600|FBtr0113024|FBtr0307300 6001736|6001736|6001736 6003738|6003738|6003738 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 6002825 6002861 3'utr Tsp26A FlyBase G1773.1 ATTGATTCGCTCTTGTACCTTTTTAAATCTATATTGC 26 6002838 0.72004263 5 26 302 1 1.544068044 0 0.307692308 0.485714286 26 0 0 35 2L:6002825-6002861 6 32.5 697 FBgn0031760 374.3466667 15.47666667 23.65666667 0.086817923 2.099935387 1.373819924 1 1 1 0.1 dme-miR-980-3p 8mer-A1 GGCAGCTA 2L 6003357 6003364 + 2L_6003357_6003364_+ 0.668733677 0.668733929 0.668733803 1.41E-07 Tsp26A FBtr0307300|FBtr0332600|FBtr0113024 6001736|6001736|6001736 6003738|6003738|6003738 2L + 6003307 6003382 3'utr Tsp26A FlyBase G2227.1 TGCCCAAAAATCTTGTATGTACACTTGCAACTGAGCAATTGGCCAGATGTGGCAGCTAATACACTTTTTGGATATG 104 6003356 0.966414869 6 101 545 0.977777778 2.120573931 0.007407407 0.230769231 0.407407407 104 3 0 132 2L:6003307-6003382 8 Tsp26A FBtr0332600|FBtr0113024|FBtr0307300 6001736|6001736|6001736 6003738|6003738|6003738 GGCAGCTA 8mer-A1 dme-miR-980-3p 2L + 6003303 6003380 3'utr Tsp26A FlyBase G1775.1 AATATGCCCAAAAATCTTGTATGTACACTTGCAACTGAGCAATTGGCCAGATGTGGCAGCTAATACACTTTTTGGATA 58 6003356 0.965372589 4 57 307 0.988505747 1.934498451 0 0.362068966 0.574712644 58 1 0 86 2L:6003303-6003380 8 79 698 FBgn0031760 374.3466667 15.47666667 23.65666667 0.211034335 5.104458324 3.3394392 1 1 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2L 6007585 6007591 - 2L_6007585_6007591_- 0.671717047 0.671796074 0.67175656 5.59E-05 CG9098 FBtr0332602|FBtr0079228|FBtr0079229 6007362|6007362|6007503 6007907|6007907|6007907 2L - 6007576 6007616 3'utr CG9098 FlyBase G7976.1 AAGAGCCACCTCACTCTGATGTACTACCAAAGTCTTGTATT 22 6007597 0.706474109 4 20 127 0.857142857 1.380211242 0.142857143 0.181818182 0.357142857 22 4 0 24 2L:6007576-6007616 7 CG9098 FBtr0079228|FBtr0079229|FBtr0332602 6007362|6007503|6007362 6007907|6007907|6007907 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 6007580 6007606 3'utr CG9098 FlyBase G6210.1 TCACTCTGATGTACTACCAAAGTCTTG 7 6007595 0.679050878 2 7 37 1 1 0.1 0.428571429 0.6 7 0 0 10 2L:6007580-6007606 7 13.5 699 FBgn0031762 5 0.196666667 0.31 2.7 68.6440678 43.5483871 6 4 5 0.1 dme-miR-277-3p 7mer-A1 GCATTTA 2L 6041268 6041274 - 2L_6041268_6041274_- 0.822481005 0.823348457 0.822914731 0.000613415 ade2 FBtr0079219|FBtr0079220|FBtr0079221 6041179|6041179|6041179 6041313|6041313|6041313 2L - 6041228 6041289 3'utr ade2 FlyBase G7995.1 TTAAATAGGTTCTTGGCATTTATGACCTGATATATCTAAATACTATATACACGAATTTGTTT 63 6041270 0.987501565 14 59 593 0.929411765 1.897627091 0.258823529 0.238095238 0.435294118 63 6 0 79 2L:6041228-6041289 7 ade2 FBtr0079219|FBtr0079220|FBtr0079221 6041179|6041179|6041179 6041313|6041313|6041313 GCATTTA 7mer-A1 dme-miR-277-3p 2L - 6041248 6041289 3'utr ade2 FlyBase G6217.1 TTAAATAGGTTCTTGGCATTTATGACCTGATATATCTAAATA 30 6041269 0.652043457 8 30 277 1 1.716003344 0.173076923 0.6 0.769230769 30 0 0 52 2L:6041248-6041289 7 45 700 FBgn0000052 854.3333333 23.79 36.27666667 0.052672649 1.891551072 1.240466783 -4 -5 -4.5 0.1 dme-miR-79-3p 6mer2-7 AGCTTT 2L 6046713 6046718 - 2L_6046713_6046718_- 0.999799634 0.999999967 0.999899801 0.000141704 slmo FBtr0343130|FBtr0079218|FBtr0299810|FBtr0079217|FBtr0112945 6046514|6046652|6046649|6046652|6046649 6047052|6047052|6047052|6047052|6047052 2L - 6046678 6046732 3'utr slmo FlyBase G8015.1 ACATAGTCAATGTAAGCTTTGTAAGCCGCCGCAGATTTCGAAGAACGAGAGGAGC 12 6046719 0.970537166 7 12 69 1 1.113943352 0 0.083333333 0.153846154 12 0 0 13 2L:6046678-6046732 6 slmo FBtr0112945|FBtr0343130|FBtr0079218|FBtr0299810|FBtr0079217 6046649|6046514|6046652|6046649|6046652 6047052|6047052|6047052|6047052|6047052 AGCTTT 6mer2-7 dme-miR-79-3p 2L - 6046686 6046728 3'utr slmo FlyBase G6233.1 AGTCAATGTAAGCTTTGTAAGCCGCCGCAGATTTCGAAGAACG 6 6046720 0.822863583 3 5 35 0.933333333 0.84509804 0.066666667 0.833333333 0.933333333 6 0 1 14 2L:6046686-6046728 6 7 701 FBgn0029161 669.6266667 62.72666667 95.86333333 0.010453586 0.111595281 0.07302062 1 2 1.5 0.1 dme-miR-305-5p 7mer-m8 AGTACAA 2L 6046966 6046972 - 2L_6046966_6046972_- 0.643267494 0.64326757 0.643267532 7.07E-08 slmo FBtr0343130|FBtr0079218|FBtr0299810|FBtr0079217|FBtr0112945 6046514|6046652|6046649|6046652|6046649 6047052|6047052|6047052|6047052|6047052 2L - 6046929 6047034 3'utr slmo FlyBase G8017.1 TGCAAGGTCGCGCGGGGGCTGTTCACTAGTGAATTATTTAGATGGCGCGCGGTCGTCGTTTTAGTACAACTAATTAATCGATGGCACGATGGACATGGACAGCAAC 82 6046974 0.942682906 14 80 621 0.978947368 1.667452953 0.336842105 0.146341463 0.263157895 82 1 1 93 2L:6046929-6047034 7 slmo FBtr0112945|FBtr0343130|FBtr0079218|FBtr0299810|FBtr0079217 6046649|6046514|6046652|6046649|6046652 6047052|6047052|6047052|6047052|6047052 AGTACAA 7mer-m8 dme-miR-305-5p 2L - 6046929 6047030 3'utr slmo FlyBase G6235.1 AGGTCGCGCGGGGGCTGTTCACTAGTGAATTATTTAGATGGCGCGCGGTCGTCGTTTTAGTACAACTAATTAATCGATGGCACGATGGACATGGACAGCAAC 56 6046974 0.882109073 11 54 384 0.948051948 1.164352856 0.376623377 0.267857143 0.467532468 56 0 4 73 2L:6046929-6047030 7 40.5 702 FBgn0029161 669.6266667 62.72666667 95.86333333 0.060481462 0.645658412 0.422476442 2 2 2 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 2L 6053818 6053824 + 2L_6053818_6053824_+ 0.619564351 0.620189068 0.61987671 0.00044173 CG9135 FBtr0343121 6053257 6053877 2L + 6053717 6053866 3'utr CG9135 FlyBase G2252.1 ACTACAAAACACGTAAATTAACGAACTAAGCGCATAGGTTACATATAAAAAGTATACCATGGAAAAATCCAATACCAGTTGCAACTATTAATAGTACATCATGCATTTTAATCTTATACAAAGGAATATTTAAATAAAGAGAATGTTAGT 28 6053818 0.978030085 14 26 180 0.971428571 1.230448921 0.057142857 0.178571429 0.342857143 28 0 1 34 2L:6053717-6053866 7 CG9135 FBtr0343121 6053257 6053877 TGCATTT 7mer-m8 dme-miR-277-3p 2L + 6053760 6053834 3'utr CG9135 FlyBase G1794.1 TATAAAAAGTATACCATGGAAAAATCCAATACCAGTTGCAACTATTAATAGTACATCATGCATTTTAATCTTATA 18 6053818 0.987390213 7 17 148 0.961538462 1.397940009 0 0.333333333 0.538461538 18 1 0 25 2L:6053760-6053834 7 11.5 703 FBgn0031769 791.34 43.62666667 67.18666667 0.014532312 0.263600244 0.171164914 0 0 0 0.1 dme-miR-995-5p 6mer3-8 AATTCG 2L 6073589 6073594 + 2L_6073589_6073594_+ 0.993848641 0.998893642 0.996371141 0.003567354 Kr-h2 FBtr0343126|FBtr0079192 6073461|6073461 6073961|6073961 2L + 6073487 6073617 3'utr Kr-h2 FlyBase G2266.2 CAACAATCAAATGACATATGAATAAGGCTATTTAAATACCAGTTCACTTGCATAGATGTTCACACAGGAGATTGGGGTTCATCCGTTTTATTTGTTAGCCGAAATTCGTTGCACCTTTTCGAAGCGAAACT 21 6073596 0.975707433 15 20 169 0.958333333 1.361727836 0.208333333 0.095238095 0.208333333 21 1 0 23 2L:6073487-6073617 6 Kr-h2 FBtr0079192|FBtr0343126|FBtr0302212 6073461|6073461|6073461 6073961|6073961|6073712 AATTCG 6mer3-8 dme-miR-995-5p 2L + 6073581 6073612 3'utr Kr-h2 FlyBase G1808.1 TTAGCCGAAATTCGTTGCACCTTTTCGAAGCG 7 6073596 0.713862806 4 7 49 1 1.204119983 0.25 0.714285714 0.875 7 0 0 16 2L:6073581-6073612 6 6 704 FBgn0266449 611 49.99666667 76.03333333 0.009819967 0.120008001 0.078912758 -7 -7 -7 0.1 dme-miR-14-3p 7mer-m8 AAGACTG 2L 6095586 6095592 + 2L_6095586_6095592_+ 0.671795832 0.671795832 0.671795832 0 Kr-h1 FBtr0344438|FBtr0344437 6095555|6095555 6096498|6096498 2L + 6095552 6095743 stop_codon Kr-h1 FlyBase G2287.1 CCTAGGGGTCCAAGGCCGATCCCCAATCAGCATTAAGACTGTCCAAACAAATTCTAACTGAAATTAGCCTAAGTTTTTTCTCTGAGGTTCGGGGTTAGGCCTGGAAAAAGAAAGCATAGAAACGTATGGATATGGCAGTGAGATAGTTTTCCAGCAGCGAAAATGAAAATGCCAAAAGTATTAAAAAAGGGA 168 6095583 0.941213682 18 157 850 0.928205128 1.78055732 0.087179487 0.160714286 0.276923077 168 12 2 181 2L:6095552-6095743 7 Kr-h1 FBtr0344437|FBtr0344438 6095555|6095555 6096498|6096498 AAGACTG 7mer-m8 dme-miR-14-3p 2L + 6095544 6095661 stop_codon Kr-h1 FlyBase G1818.1 CAAGGCCTCCTAGGGGTCCAAGGCCGATCCCCAATCAGCATTAAGACTGTCCAAACAAATTCTAACTGAAATTAGCCTAAGTTTTTTCTCTGAGGTTCGGGGTTAGGCCTGGAAAAAG 106 6095584 0.999444007 16 101 522 0.953020134 1.851258349 0.053691275 0.320754717 0.516778523 106 6 1 142 2L:6095544-6095661 7 97 705 FBgn0266450 461.9366667 12.49333333 19.07 0.209985496 7.764140875 5.086523335 3 2 2.5 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 2L 6095894 6095899 + 2L_6095894_6095899_+ 1 1 1 0 Kr-h1 FBtr0344438|FBtr0344437 6095555|6095555 6096498|6096498 2L + 6095857 6095940 3'utr Kr-h1 FlyBase G2288.1 AGTTTGGCATATACAATGTAGGTATAGTTTGTTTTCCTGTGTTGTCCACTTAGTCAAATTGCAGCAATTGGCATTATGCGTATT 17 6095899 0.990520638 11 16 166 0.954545455 1.322219295 0.181818182 0.235294118 0.409090909 17 1 0 21 2L:6095857-6095940 6 Kr-h1 FBtr0344437|FBtr0344438 6095555|6095555 6096498|6096498 TGTGTT 6mer3-8 dme-miR-317-3p 2L + 6095856 6095929 3'utr Kr-h1 FlyBase G1820.1 TAGTTTGGCATATACAATGTAGGTATAGTTTGTTTTCCTGTGTTGTCCACTTAGTCAAATTGCAGCAATTGGCA 19 6095906 0.755073136 11 18 168 1 1.397940009 0.4 0.315789474 0.48 19 0 0 25 2L:6095856-6095929 6 10.5 706 FBgn0266450 461.9366667 12.49333333 19.07 0.022730389 0.840448239 0.550603041 -5 -12 -8.5 0.1 dme-miR-980-5p 7mer-m8 GAAAAAC 2L 6096080 6096086 + 2L_6096080_6096086_+ 0.70490383 0.432223495 0.568563662 0.192814089 Kr-h1 FBtr0344438|FBtr0344437 6095555|6095555 6096498|6096498 2L + 6096034 6096120 3'utr Kr-h1 FlyBase G2289.1 AATAAGTTACGCGCATAACTACATATATACACATATTAATGAGAACGAAAAACCATGGCCATATTGGCGCTTAATATTTATAAAATA 36 6096089 0.92576977 8 35 126 0.951219512 1.591064607 0.12195122 0.138888889 0.243902439 36 2 0 39 2L:6096034-6096120 7 Kr-h1 FBtr0344437|FBtr0344438 6095555|6095555 6096498|6096498 GAAAAAC 7mer-m8 dme-miR-980-5p 2L + 6096056 6096108 3'utr Kr-h1 FlyBase G1821.1 ATATATACACATATTAATGAGAACGAAAAACCATGGCCATATTGGCGCTTAAT 20 6096089 0.909516138 3 20 44 1 1.51851394 0.090909091 0.5 0.696969697 20 0 0 33 2L:6096056-6096108 7 23.5 707 FBgn0266450 461.9366667 12.49333333 19.07 0.050872775 1.881003202 1.232302045 -9 -9 -9 0.1 dme-miR-7-5p 6mer2-7 TCTTCC 2L 6096161 6096166 + 2L_6096161_6096166_+ 0.537073937 0.990538306 0.763806122 0.320647752 Kr-h1 FBtr0344438|FBtr0344437 6095555|6095555 6096498|6096498 2L + 6096132 6096201 3'utr Kr-h1 FlyBase G2290.1 TATTTATTATGAACTCTGCTCGCCAAACTTCTTCCTTCCCCTCCACGATTAGTGTCAACGGCATCTTTGA 14 6096148 0.712390714 7 11 81 0.75 1.079181246 0 0.142857143 0.25 14 4 0 12 2L:6096132-6096201 6 Kr-h1 FBtr0344437|FBtr0344438 6095555|6095555 6096498|6096498 TCTTCC 6mer2-7 dme-miR-7-5p 2L + 6096117 6096174 3'utr Kr-h1 FlyBase G1822.1 AATACATATAATACTTATTTATTATGAACTCTGCTCGCCAAACTTCTTCCTTCCCCTC 12 6096141 0.980015505 5 12 88 1 1.230448921 0 0.25 0.470588235 12 0 0 17 2L:6096117-6096174 6 4.5 708 FBgn0266450 461.9366667 12.49333333 19.07 0.009741595 0.360192102 0.235972732 13 20 16.5 0.1 dme-miR-184-5p 6mer3-8 TGATAA 2L 6096304 6096309 + 2L_6096304_6096309_+ 0.999588803 0.999284908 0.999436855 0.00021489 Kr-h1 FBtr0344438|FBtr0344437 6095555|6095555 6096498|6096498 2L + 6096238 6096345 3'utr Kr-h1 FlyBase G2291.1 CTAAATAAGGGAAAACTGAGGAAAAAGGATCGGTAACTTTAATTTTACACACGGAGAATATTGAACTGATAAACAAGAAGAAAGCAAGCATAACTACGTTTATATACA 319 6096298 0.954860386 12 310 1424 0.975062344 1.814025507 0.02244389 0.194357367 0.359102244 319 5 5 391 2L:6096238-6096345 6 Kr-h1 FBtr0344437|FBtr0344438 6095555|6095555 6096498|6096498 TGATAA 6mer3-8 dme-miR-184-5p 2L + 6096259 6096319 3'utr Kr-h1 FlyBase G1823.1 AAAAAGGATCGGTAACTTTAATTTTACACACGGAGAATATTGAACTGATAAACAAGAAGAA 205 6096298 0.680934594 8 193 894 0.949152542 2.146128036 0.047457627 0.356097561 0.552542373 205 14 1 280 2L:6096259-6096319 6 253.5 709 FBgn0266450 461.9366667 12.49333333 19.07 0.548776528 20.29082177 13.29313057 6 6 6 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 6096906 6096912 - 2L_6096906_6096912_- 0.658981991 0.658981768 0.65898188 1.41E-07 CG9175 FBtr0079212|FBtr0079211 6096696|6096696 6097167|6097167 2L - 6096885 6096954 3'utr CG9175 FlyBase G8041.1 TGTTTATCTCTCTAGCCACCGCAAACGAAGCCTTGCTCGTTTGGCAGCTTTGCCCGTTGTACATGATTTT 1317 6096914 0.790274106 11 1305 11776 0.987991995 2.170555059 0.350233489 0.119210326 0.226150767 1317 9 9 1481 2L:6096885-6096954 7 CG9175 FBtr0079212|FBtr0079211 6096696|6096696 6097167|6097167 GGCAGCT 7mer-m8 dme-miR-980-3p 2L - 6096889 6096958 3'utr CG9175 FlyBase G6254.1 AATTTGTTTATCTCTCTAGCCACCGCAAACGAAGCCTTGCTCGTTTGGCAGCTTTGCCCGTTGTACATGA 891 6096914 0.851952976 11 886 7867 0.995780591 3.151063253 0.319268636 0.405162738 0.627285513 891 6 0 1416 2L:6096889-6096958 7 1092 710 FBgn0031779 121.6666667 7.2 10.92 8.975342466 151.6666667 100 2 2 2 0.1 dme-miR-970-3p 6mer3-8 TCTTAT 2L 6096990 6096995 - 2L_6096990_6096995_- 0.99999988 0.99999984 0.99999986 7.07E-08 CG9175 FBtr0079212|FBtr0079211 6096696|6096696 6097167|6097167 2L - 6096956 6097024 3'utr CG9175 FlyBase G8042.1 AGTGCATAGTTTGTGCCGGCTGCCTTATCTCTTATACTAATTGCAATGTTTGCTTAGTTGTATCATAAT 115 6096993 0.988423229 12 109 1002 0.954545455 1.46834733 0.207792208 0.269565217 0.454545455 115 3 4 147 2L:6096956-6097024 6 CG9175 FBtr0079212|FBtr0079211 6096696|6096696 6097167|6097167 TCTTAT 6mer3-8 dme-miR-970-3p 2L - 6096981 6097031 3'utr CG9175 FlyBase G6255.1 TAGTTTAAGTGCATAGTTTGTGCCGGCTGCCTTATCTCTTATACTAATTGC 110 6096993 0.723822713 7 105 923 0.9625 1.710399466 0.31875 0.336363636 0.54375 110 4 2 154 2L:6096981-6097031 6 102.5 711 FBgn0031779 121.6666667 7.2 10.92 0.842465753 14.23611111 9.386446886 -2 -2 -2 0.1 dme-miR-277-3p 6mer3-8 TGCATT 2L 6097131 6097136 - 2L_6097131_6097136_- 0.970799548 0.995661334 0.983230441 0.017579947 CG9175 FBtr0079212|FBtr0079211 6096696|6096696 6097167|6097167 2L - 6097110 6097204 stop_codon CG9175 FlyBase G8043.1 CGCCGTGTTCGTGCTGTGCTCCTACATTGGCATCTGATGCTCAATGGCCAGAAGAGAGTTATTCGATTTGCATTATTAGTTTGTAAACAGGGTTT 44 6097138 0.809251049 12 43 476 0.980769231 1.707570176 0.173076923 0.181818182 0.307692308 44 1 0 51 2L:6097110-6097204 6 CG9175 FBtr0079212|FBtr0079211 6096696|6096696 6097167|6097167 TGCATT 6mer3-8 dme-miR-277-3p 2L - 6097097 6097186 stop_codon CG9175 FlyBase G6256.1 CTCCTACATTGGCATCTGATGCTCAATGGCCAGAAGAGAGTTATTCGATTTGCATTATTAGTTTGTAAACAGGGTTTAGTTTTCTGCAAT 26 6097138 0.793856487 9 24 286 0.945945946 1.243038049 0.108108108 0.346153846 0.540540541 26 1 1 35 2L:6097097-6097186 6 27.5 712 FBgn0031779 121.6666667 7.2 10.92 0.226027397 3.819444444 2.518315018 2 2 2 0.1 dme-miR-1008-3p 7mer-m8 AGCTGTG 2L 6123088 6123094 + 2L_6123088_6123094_+ 0.561459551 0.671145512 0.616302531 0.077559644 stai FBtr0333406|FBtr0079196|FBtr0079197|FBtr0304908|FBtr0079198 6123063|6123063|6123063|6123063|6123063 6123899|6123899|6124653|6124653|6123899 2L + 6123008 6123107 stop_codon stai FlyBase G2299.1 AAGGCCCAGGCCCAGGATTTGGATGGTCAGCAGAGCGCCATTGCCTCCTCAGGCTAAGTGGAGAACGATCCTGCATCGAGAGCTGTGCTCACCCACTGCA 43 6123093 0.955149943 14 39 180 0.884615385 1.662757832 0.173076923 0.186046512 0.326923077 43 6 0 46 2L:6123008-6123107 7 stai FBtr0079196|FBtr0079197|FBtr0304908|FBtr0079198|FBtr0333406 6123063|6123063|6123063|6123063|6123063 6123899|6124653|6124653|6123899|6123899 AGCTGTG 7mer-m8 dme-miR-1008-3p 2L + 6123008 6123108 stop_codon stai FlyBase G1827.1 AAGGCCCAGGCCCAGGATTTGGATGGTCAGCAGAGCGCCATTGCCTCCTCAGGCTAAGTGGAGAACGATCCTGCATCGAGAGCTGTGCTCACCCACTGCAA 30 6123093 0.972900263 15 24 144 0.853658537 1.544068044 0.243902439 0.266666667 0.463414634 30 6 0 35 2L:6123008-6123108 7 23 713 FBgn0266521 1156.12 73.38 111.3866667 0.019894129 0.313436904 0.20648791 -5 -5 -5 0.1 dme-miR-33-5p 7mer-A1 AATGCAA 2L 6123354 6123360 + 2L_6123354_6123360_+ 0.691728668 0.697521993 0.694625331 0.004096482 stai FBtr0333406|FBtr0079196|FBtr0079197|FBtr0304908|FBtr0079198 6123063|6123063|6123063|6123063|6123063 6123899|6123899|6124653|6124653|6123899 2L + 6123130 6123396 3'utr stai FlyBase G2300.1 AAAAAGAACAGCAACACTGCATAATACACCAACACATATTTAAGCAAGAAAACCCTTAAAACTGAAAACGATTTCTCAAAATTTCCAAGTATTATGAAAGCAAACGAAGCGAAGGGCAAGGGCAAAGTCTCAAGATACCGCTGAGCGAGTTTTCTCACGAGCTCTATAATGAAACACGAATAAGCTACTATAAAGCGAAAAGAAATGAATGCTTACGGCAAGTTAATGCAAAAAAAAAATTAGTAAAGGAAATCTACATTTAAACTT 204 6123352 0.964225743 32 184 958 0.90376569 1.73239376 0.138075314 0.137254902 0.263598326 204 20 3 216 2L:6123130-6123396 7 stai FBtr0079196|FBtr0079197|FBtr0304908|FBtr0079198|FBtr0333406 6123063|6123063|6123063|6123063|6123063 6123899|6124653|6124653|6123899|6123899 AATGCAA 7mer-A1 dme-miR-33-5p 2L + 6123131 6123373 3'utr stai FlyBase G1828.1 AAAAGAACAGCAACACTGCATAATACACCAACACATATTTAAGCAAGAAAACCCTTAAAACTGAAAACGATTTCTCAAAATTTCCAAGTATTATGAAAGCAAACGAAGCGAAGGGCAAGGGCAAAGTCTCAAGATACCGCTGAGCGAGTTTTCTCACGAGCTCTATAATGAAACACGAATAAGCTACTATAAAGCGAAAAGAAATGAATGCTTACGGCAAGTTAATGCAAAAAAAAAATTAGT 135 6123352 0.955968491 28 120 568 0.882022472 1.718778398 0.140449438 0.22962963 0.415730337 135 19 2 157 2L:6123131-6123373 7 47 714 FBgn0266521 1156.12 73.38 111.3866667 0.040653219 0.640501499 0.421953555 2 2 2 0.1 dme-miR-33-5p 6mer2-7 AATGCA 2L 6123429 6123434 + 2L_6123429_6123434_+ 1 1 1 0 stai FBtr0333406|FBtr0079196|FBtr0079197|FBtr0304908|FBtr0079198 6123063|6123063|6123063|6123063|6123063 6123899|6123899|6124653|6124653|6123899 2L + 6123414 6123445 3'utr stai FlyBase G2301.1 AGCCTATGCAAGTTGAATGCATGCCTGTCATT 7 6123431 0.706712033 4 6 45 0.9 0.653212514 0 0.285714286 0.5 7 0 1 9 2L:6123414-6123445 6 stai FBtr0079196|FBtr0079197|FBtr0304908|FBtr0079198|FBtr0333406 6123063|6123063|6123063|6123063|6123063 6123899|6124653|6124653|6123899|6123899 AATGCA 6mer2-7 dme-miR-33-5p 2L + 6123412 6123442 3'utr stai FlyBase G1829.1 AAAGCCTATGCAAGTTGAATGCATGCCTGTC 7 6123426 0.710015409 3 5 32 0.833333333 1 0.25 0.571428571 0.75 7 2 0 10 2L:6123412-6123442 6 6 715 FBgn0266521 1156.12 73.38 111.3866667 0.005189773 0.081766149 0.053866411 -2 3 0.5 0.1 dme-miR-307a-3p 7mer-m8 GGTTGTG 2L 6331071 6331077 + 2L_6331071_6331077_+ 0.702972023 0.702972035 0.702972029 0 PDZ-GEF FBtr0333242|FBtr0300039|FBtr0079249|FBtr0300038 6330837|6330837|6330642|6330837 6332789|6331750|6331750|6331750 2L + 6331044 6331158 3'utr PDZ-GEF FlyBase G2335.1 CAGATAGAGTTGCCAAAATTTGTGAATGGTTGTGGTTTCAATTTCGCCAGCAATCAGAAACAACGTATCCCCGATCACCTTTACCCTTTACGGAGCTGCAAAAATATTACTAGCA 67 6331063 0.956289151 15 66 529 0.986842105 1.875061263 0.276315789 0.134328358 0.236842105 67 1 0 75 2L:6331044-6331158 7 PDZ-GEF FBtr0300038|FBtr0079249|FBtr0300039|FBtr0333242 6330837|6330642|6330837|6330837 6331750|6331750|6331750|6332789 GGTTGTG 7mer-m8 dme-miR-307a-3p 2L + 6331045 6331082 3'utr PDZ-GEF FlyBase G1853.1 AGATAGAGTTGCCAAAATTTGTGAATGGTTGTGGTTTC 16 6331070 0.659142935 5 14 141 0.894736842 0.929418926 0.368421053 0.1875 0.315789474 16 1 1 17 2L:6331045-6331082 7 23 716 FBgn0265778 1055.34 20.3 30.87333333 0.021793924 1.133004926 0.744979486 8 1 4.5 0.1 dme-miR-2b-2-5p 7mer-m8 TTGAAGA 2L 6331355 6331361 + 2L_6331355_6331361_+ 0.57147266 0.498365009 0.534918835 0.05169495 PDZ-GEF FBtr0333242|FBtr0300039|FBtr0079249|FBtr0300038 6330837|6330837|6330642|6330837 6332789|6331750|6331750|6331750 2L + 6331184 6331398 3'utr PDZ-GEF FlyBase G2336.1 TAGTAACTGAGAATTTAATTTTAGTTAGGGCTTACCATTTATTATTTAATTTAGCTAAATTCTTTGTACACACTTTCTACCCATCATTCACCGCCAGCGTAGAAGTTGCCTTTTCTCTTAAAAGAAAACGTCTGCAGGCAGACCCTCTCAGCAGACCCAACTAAAACTCTTTTGAAGACTTTTCGTCGGCATTTACAAGTGTAAGAACAGAACAA 43 6331365 0.98260541 21 42 319 0.963636364 1.72427587 0.2 0.23255814 0.4 43 2 0 53 2L:6331184-6331398 7 PDZ-GEF FBtr0300038|FBtr0079249|FBtr0300039|FBtr0333242 6330837|6330642|6330837|6330837 6331750|6331750|6331750|6332789 TTGAAGA 7mer-m8 dme-miR-2b-2-5p 2L + 6331310 6331377 3'utr PDZ-GEF FlyBase G1856.1 AACGTCTGCAGGCAGACCCTCTCAGCAGACCCAACTAAAACTCTTTTGAAGACTTTTCGTCGGCATTT 10 6331330 0.840109877 7 9 59 0.888888889 1.204119983 0 0.6 0.777777778 10 2 0 16 2L:6331310-6331377 7 12.5 717 FBgn0265778 1055.34 20.3 30.87333333 0.011844524 0.615763547 0.404880155 -10 25 7.5 0.1 dme-miR-252-5p 6mer3-8 GTACTT 2L 6332132 6332137 + 2L_6332132_6332137_+ 0.760693301 0.881188796 0.820941049 0.085203185 PDZ-GEF FBtr0333242 6330837 6332789 2L + 6332079 6332185 3'utr PDZ-GEF FlyBase G2343.1 AAATCAAATCAAACGATATTGGATATGCTATATATGTATACATTGTGCTCTTTGTACTTTTAAGTTAGACTAAATACCAAATTTGCTTTTTAAGGCTTAAGAAAAAC 82 6332161 0.991359336 19 77 828 0.949494949 1.672097858 0.262626263 0.170731707 0.313131313 82 4 1 94 2L:6332079-6332185 6 PDZ-GEF FBtr0333242 6330837 6332789 GTACTT 6mer3-8 dme-miR-252-5p 2L + 6332056 6332201 3'utr PDZ-GEF FlyBase G1861.1 GCTGAATTCGAGAAAACAAAAACAAATCAAATCAAACGATATTGGATATGCTATATATGTATACATTGTGCTCTTTGTACTTTTAAGTTAGACTAAATACCAAATTTGCTTTTTAAGGCTTAAGAAAAACATTAGATCGAAGCCTA 58 6332121 0.990771662 22 55 562 0.975609756 1.903089987 0.158536585 0.310344828 0.512195122 58 2 0 80 2L:6332056-6332201 6 38 718 FBgn0265778 1055.34 20.3 30.87333333 0.036007353 1.871921182 1.230835673 -29 11 -9 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 6333148 6333154 - 2L_6333148_6333154_- 0.65868579 0.658714411 0.6587001 2.02E-05 Pez FBtr0331226|FBtr0079284 6332879|6332879 6333292|6333292 2L - 6333124 6333235 3'utr Pez FlyBase G8066.1 TTGTTTATATCGAACAAATTTCCTTTAGTTCTCGTTTTAAAAAATCAGTACAACTCCGTTCAGCAATTTTATATTTCTACTGGCAGCTGTTGTCCCTATAATCGTTAAATTT 483 6333155 0.990083965 23 458 4598 0.953982301 2.129528774 0.02300885 0.144927536 0.269026549 483 23 3 539 2L:6333124-6333235 7 Pez FBtr0331226|FBtr0079284 6332879|6332879 6333292|6333292 GGCAGCT 7mer-m8 dme-miR-980-3p 2L - 6333118 6333197 3'utr Pez FlyBase G6276.1 AAAAAATCAGTACAACTCCGTTCAGCAATTTTATATTTCTACTGGCAGCTGTTGTCCCTATAATCGTTAAATTTTAATAC 281 6333155 0.902582566 17 264 2648 0.93627451 2.104942108 0.046568627 0.341637011 0.546568627 281 24 2 382 2L:6333118-6333197 7 367 719 FBgn0031799 375.3333333 10.13666667 15.53333333 0.977797513 36.20519566 23.62660944 1 1 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 2L 6415192 6415199 + 2L_6415192_6415199_+ 0.643565473 0.643565436 0.643565455 7.07E-08 CG13982 FBtr0079256 6414070 6415335 2L + 6415167 6415298 3'utr CG13982 FlyBase G2382.1 TTGTAAATTTTTAAGTTTAACTGATACCAAAGATTTATTTTGAAACTTGAATGTTACTCTCCATAGACTACATACTAGTATTTAAGTACGTTCACTATTTTCGCTGCACAGTAAATGTCATTTATTTGTGTC 115 6415191 0.903363832 21 113 864 0.984732824 2.11058971 0.022900763 0.113043478 0.221374046 115 2 0 129 2L:6415167-6415298 8 CG13982 FBtr0079256 6414070 6415335 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2L + 6415168 6415253 3'utr CG13982 FlyBase G1887.1 TGTAAATTTTTAAGTTTAACTGATACCAAAGATTTATTTTGAAACTTGAATGTTACTCTCCATAGACTACATACTAGTATTTAAGT 72 6415191 0.904059583 10 71 546 0.990291262 1.707570176 0 0.305555556 0.514563107 72 0 1 102 2L:6415168-6415253 8 80 720 FBgn0031811 23.7 1.106666667 1.73 3.375527426 72.28915663 46.24277457 1 1 1 0.1 dme-miR-283-5p 8mer-A1 TGATATTA 2L 6426138 6426145 + 2L_6426138_6426145_+ 0.387631455 0.55518433 0.471407892 0.118477721 Fic FBtr0079257 6426121 6426371 2L + 6426095 6426150 stop_codon Fic FlyBase G2390.1 CGAATCCGGATCTGGAGATCTACCGTGACCCATCTAGATGCATTGATATTAGACAA 27 6426136 0.722737755 9 27 167 1 1.491361694 0 0.148148148 0.258064516 27 0 0 31 2L:6426095-6426150 8 Fic FBtr0079257 6426121 6426371 TGATATTA 8mer-A1 dme-miR-283-5p 2L + 6426090 6426149 stop_codon Fic FlyBase G1891.1 TTCTACGAATCCGGATCTGGAGATCTACCGTGACCCATCTAGATGCATTGATATTAGACA 16 6426137 0.970407041 7 16 91 1 1.361727836 0.130434783 0.375 0.565217391 16 0 0 23 2L:6426090-6426149 8 14 721 FBgn0263278 143.1166667 8.97 13.60333333 0.09782229 1.560758082 1.02915952 2 1 1.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-m8 CTGTGAT 2L 6426260 6426266 + 2L_6426260_6426266_+ 0.661615692 0.661615692 0.661615692 0 Fic FBtr0079257|FBtr0079257|FBtr0079257 6426121|6426121|6426121 6426371|6426371|6426371 2L + 6426243 6426308 3'utr Fic FlyBase G2392.1 AAAATAACGATGTAATTCTGTGATCATATTTAAGCTAAAAGACAACCAAAAAATGTACATAATGCA 237 6426259 0.854317163 13 218 1974 0.93220339 1.962211439 0.06440678 0.219409283 0.372881356 237 18 2 275 2L:6426243-6426308 7 Fic FBtr0079257|FBtr0079257|FBtr0079257 6426121|6426121|6426121 6426371|6426371|6426371 CTGTGAT 7mer-m8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 6426241 6426318 3'utr Fic FlyBase G1893.1 GAAAAATAACGATGTAATTCTGTGATCATATTTAAGCTAAAAGACAACCAAAAAATGTACATAATGCACAATCCAACT 151 6426258 0.933418858 14 139 1229 0.922018349 1.604226053 0.050458716 0.298013245 0.513761468 151 13 4 201 2L:6426241-6426318 7 174.5 722 FBgn0263278 143.1166667 8.97 13.60333333 1.219284966 19.45373467 12.8277383 1 2 1.5 0.1 dme-miR-980-5p 6mer3-8 GAAAAA 2L 6449315 6449320 - 2L_6449315_6449320_- 0.931269367 1 0.965634684 0.048599873 retm FBtr0329951|FBtr0339788|FBtr0079272 6448804|6448462|6448804 6449707|6449851|6449851 2L - 6449204 6449320 3'utr retm FlyBase G8127.2 GAAAAAATTGAAATTGTAATCAATAACTACGTGTTACCTAATTAGTTTAATAAACAAATTGCCGAAATGGCTTATTGCAAGGATTTTAGCCAGAACTTATACAAAAGAGTGAAATGT 164 6449291 0.71996675 24 157 1296 0.945945946 1.397940009 0.064864865 0.12804878 0.227027027 164 4 6 175 2L:6449204-6449320 6 retm FBtr0329951|FBtr0339788|FBtr0079272 6448804|6448462|6448804 6449707|6449851|6449851 GAAAAA 6mer3-8 dme-miR-980-5p 2L - 6449195 6449324 3'utr retm FlyBase G6319.2 AATAGAAAAAATTGAAATTGTAATCAATAACTACGTGTTACCTAATTAGTTTAATAAACAAATTGCCGAAATGGCTTATTGCAAGGATTTTAGCCAGAACTTATACAAAAGAGTGAAATGTAAGATTTGA 103 6449291 0.906631751 22 100 804 0.97826087 1.829303773 0.043478261 0.27184466 0.456521739 103 2 1 135 2L:6449195-6449324 6 3 723 FBgn0031814 365.7 13.12 20.05 0.008203445 0.228658537 0.149625935 -29 -29 -29 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 2L 6449682 6449687 - 2L_6449682_6449687_- 1 1 1 0 retm FBtr0329951|FBtr0339788|FBtr0079272 6448804|6448462|6448804 6449707|6449851|6449851 2L - 6449615 6449702 3'utr retm FlyBase G8130.1 AAAGTGGTAATATCTTGTGTTTTAGTTGTCTTTAGTTGTTTAGCAGAATGTTAGTTTGATTTTAAATTGTATTTAGCTCAAATAGGCC 62 6449688 0.71880178 19 57 754 0.909090909 1.146128036 0.324675325 0.193548387 0.350649351 62 3 4 70 2L:6449615-6449702 6 retm FBtr0329951|FBtr0339788|FBtr0079272 6448804|6448462|6448804 6449707|6449851|6449851 TGTGTT 6mer3-8 dme-miR-317-3p 2L - 6449640 6449702 3'utr retm FlyBase G6323.1 AAAGTGGTAATATCTTGTGTTTTAGTTGTCTTTAGTTGTTTAGCAGAATGTTAGTTTGATTTT 47 6449688 0.995314682 8 41 596 0.888888889 0.954242509 0.320987654 0.468085106 0.691358025 47 2 7 72 2L:6449640-6449702 6 45.5 724 FBgn0031814 365.7 13.12 20.05 0.124418923 3.467987805 2.269326683 1 1 1 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 6468697 6468704 - 2L_6468697_6468704_- 0.500120309 0.500019164 0.500069737 7.15E-05 mmy FBtr0079269|FBtr0079268|FBtr0339787 6468536|6468589|6468536 6468844|6468844|6468844 2L - 6468649 6468754 3'utr mmy FlyBase G8151.1 TTTATGATTCCCCAAACTGTAGTTAGTGCACGGAAATTCCATTGATTTCAGTACTTAAAGGAGACTTGTAAAAATTTGTTACCTATTGTGTCCGTTGATTTATTTT 30 6468712 0.818240221 15 30 265 1 1.556302501 0.305555556 0.166666667 0.305555556 30 0 0 36 2L:6468649-6468754 8 mmy FBtr0079268|FBtr0339787|FBtr0079269 6468589|6468536|6468536 6468844|6468844|6468844 GTACTTAA 8mer-A1 dme-miR-252-5p 2L - 6468656 6468751 3'utr mmy FlyBase G6333.1 ATGATTCCCCAAACTGTAGTTAGTGCACGGAAATTCCATTGATTTCAGTACTTAAAGGAGACTTGTAAAAATTTGTTACCTATTGTGTCCGTTGAT 33 6468713 0.836333334 12 32 237 0.976190476 1.612783857 0.142857143 0.272727273 0.428571429 33 1 0 41 2L:6468656-6468751 8 16.5 725 FBgn0259749 867.8133333 52.42 80.18333333 0.019013305 0.314765357 0.205778424 8 9 8.5 0.1 dme-miR-14-3p 7mer-A1 AGACTGA 2L 6468812 6468818 - 2L_6468812_6468818_- 0.823349018 0.823347175 0.823348096 1.27E-06 mmy FBtr0079269|FBtr0079268|FBtr0339787 6468536|6468589|6468536 6468844|6468844|6468844 2L - 6468788 6468947 stop_codon mmy FlyBase G8152.1 CACCTACGCCGGCGAGAATCTCGCCTCGCATGTGGAGGGCAAGTCGTTCACCAGTCCCGTCTACCTGCGGGACAGCCGCGATCCCTTGCACGGACACCTTTAAGATGTAGGGGATCTGCATGGACGCATAGACTGATGGACGGATAGTAGTCGTTTCGAT 497 6468811 0.8549048 13 488 1787 0.982200647 2.306067436 0.283171521 0.197183099 0.354368932 497 9 2 607 2L:6468788-6468947 7 mmy FBtr0079268|FBtr0339787|FBtr0079269 6468589|6468536|6468536 6468844|6468844|6468844 AGACTGA 7mer-A1 dme-miR-14-3p 2L - 6468787 6468846 stop_codon mmy FlyBase G6334.1 AAGATGTAGGGGATCTGCATGGACGCATAGACTGATGGACGGATAGTAGTCGTTTCGATT 408 6468811 0.817033383 8 398 1449 0.979073244 2.214181309 0.255605381 0.455882353 0.668161435 408 11 3 655 2L:6468787-6468846 7 433 726 FBgn0259749 867.8133333 52.42 80.18333333 0.498955228 8.260206028 5.400124714 -7 -7 -7 0.1 dme-miR-999-3p 6mer3-8 AGTTAA 2L 6474464 6474469 - 2L_6474464_6474469_- 1 1 1 0 CG9536 FBtr0303229|FBtr0079267 6474436|6474436 6474798|6474798 2L - 6474453 6474494 3'utr CG9536 FlyBase G8161.1 TGTAATTGAAAATGATGCTTTATTTAGTTAATAACTGTAAAT 44 6474474 0.688109184 9 39 472 0.901960784 1.361727836 0.137254902 0.159090909 0.274509804 44 4 1 46 2L:6474453-6474494 6 CG9536 FBtr0303229|FBtr0079267 6474436|6474436 6474798|6474798 AGTTAA 6mer3-8 dme-miR-999-3p 2L - 6474455 6474539 3'utr CG9536 FlyBase G6340.1 CTAGAGCCCTTACATAGATGCATACTTTCTGTTGTAGTCCTTACATGTAATTGAAAATGATGCTTTATTTAGTTAATAACTGTAA 45 6474472 0.807463949 17 36 465 0.788732394 0.84509804 0.267605634 0.422222222 0.633802817 45 8 7 56 2L:6474455-6474539 6 33 727 FBgn0031818 366.33 22.85 34.65666667 0.090082712 1.444201313 0.952197749 5 3 4 0.1 dme-miR-965-3p 7mer-m8 TACGCTT 2L 6474632 6474638 - 2L_6474632_6474638_- 0.620203575 0.620204135 0.620203855 3.54E-07 CG9536 FBtr0303229|FBtr0079267 6474436|6474436 6474798|6474798 2L - 6474610 6474704 3'utr CG9536 FlyBase G8162.1 CGTACCCCCCATCAGTGTTCCCATTTTGTAATTACCGTTCGTGTGTTTCGTAGTGTCCTGTAGACTTACGCTTGCTTGCTGCGCACACCGCCGGC 44 6474639 0.985849807 16 41 374 0.921568627 1.194976603 0.254901961 0.136363636 0.254901961 44 2 2 47 2L:6474610-6474704 7 CG9536 FBtr0303229|FBtr0079267 6474436|6474436 6474798|6474798 TACGCTT 7mer-m8 dme-miR-965-3p 2L - 6474588 6474655 3'utr CG9536 FlyBase G6341.1 GTAGTGTCCTGTAGACTTACGCTTGCTTGCTGCGCACACCGCCGGCCATGCTGCTAGGAGCGGCGGAG 24 6474639 0.979784162 6 23 186 0.933333333 1.021189299 0.066666667 0.541666667 0.755555556 24 0 3 42 2L:6474588-6474655 7 25.5 728 FBgn0031818 366.33 22.85 34.65666667 0.069609369 1.115973742 0.73578917 1 1 1 0.1 dme-bantam-3p 6mer3-8 TGATCT 2L 6474746 6474751 - 2L_6474746_6474751_- 0.982492521 0.943013785 0.962753153 0.027915656 CG9536 FBtr0303229|FBtr0079267 6474436|6474436 6474798|6474798 2L - 6474710 6474774 3'utr CG9536 FlyBase G8163.1 TGAATTTTTGATATTTAAACGAATGATCTAATGATTTACGCCCATGTTTTGTATGATTCTGCATC 47 6474751 0.82828254 11 47 400 1 1.740362689 0.109090909 0.127659574 0.254545455 47 0 0 55 2L:6474710-6474774 6 CG9536 FBtr0303229|FBtr0079267 6474436|6474436 6474798|6474798 TGATCT 6mer3-8 dme-bantam-3p 2L - 6474662 6474783 3'utr CG9536 FlyBase G6342.1 ATATATTAATGAATTTTTGATATTTAAACGAATGATCTAATGATTTACGCCCATGTTTTGTATGATTCTGCATCAAGTACGTACCCCCCATCAGTGTTCCCATTTTGTAATTACCGTTCGTG 43 6474751 0.989597655 12 38 352 0.923076923 1.079181246 0.107692308 0.325581395 0.553846154 43 1 4 60 2L:6474662-6474783 6 28.5 729 FBgn0031818 366.33 22.85 34.65666667 0.077798706 1.24726477 0.822352602 0 0 0 0.1 dme-miR-970-3p 8mer-A1 TCTTATGA 2L 6496452 6496459 + 2L_6496452_6496459_+ 0.596022607 0.368223582 0.482123095 0.161078218 CG31638 FBtr0079262|FBtr0113411 6496064|6496119 6496988|6496988 2L + 6496441 6496492 3'utr CG31638 FlyBase G2447.1 GCTGGCCATATTCTTATGAGCTTAACCCGCAGCTAAGACGGTTGTTAGGAGG 15 6496451 0.779152902 4 14 102 0.9375 1.176091259 0.3125 0.066666667 0.125 15 1 0 15 2L:6496441-6496492 8 CG31638 FBtr0113411|FBtr0079262 6496119|6496064 6496988|6496988 TCTTATGA 8mer-A1 dme-miR-970-3p 2L + 6496441 6496472 3'utr CG31638 FlyBase G1929.1 GCTGGCCATATTCTTATGAGCTTAACCCGCAG 7 6496451 0.724868643 2 7 46 1 0.954242509 0.555555556 0.285714286 0.444444444 7 0 0 9 2L:6496441-6496472 8 9.5 730 FBgn0051638 490.34 20.43333333 31.29333333 0.019374312 0.464926591 0.303579037 1 1 1 0.1 dme-miR-263a-5p 6mer3-8 GTGCCA 2L 6496629 6496634 + 2L_6496629_6496634_+ 0.999998733 0.998392597 0.999195665 0.001135684 CG31638 FBtr0079262|FBtr0113411 6496064|6496119 6496988|6496988 2L + 6496612 6496639 3'utr CG31638 FlyBase G2449.1 TTGCGGAATAGCATTTAGTGCCAGAAAT 14 6496630 0.907088606 2 14 71 1 1.278753601 0.315789474 0.285714286 0.473684211 14 0 0 19 2L:6496612-6496639 6 CG31638 FBtr0113411|FBtr0079262 6496119|6496064 6496988|6496988 GTGCCA 6mer3-8 dme-miR-263a-5p 2L + 6496586 6496636 3'utr CG31638 FlyBase G1931.1 ATTGAAGCATAATACAGGTTCGATGTTTGCGGAATAGCATTTAGTGCCAGA 6 6496629 0.95297376 4 6 31 1 0.903089987 0.375 0.333333333 0.5 6 0 0 8 2L:6496586-6496636 6 9 731 FBgn0051638 490.34 20.43333333 31.29333333 0.018354611 0.44045677 0.287601193 -1 0 -0.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 2L 6496814 6496819 + 2L_6496814_6496819_+ 1 0.999999956 0.999999978 0 CG31638 FBtr0079262|FBtr0113411 6496064|6496119 6496988|6496988 2L + 6496745 6496825 3'utr CG31638 FlyBase G2450.1 ATTTTTGCAGTTGCCTAGTCCGAAATTCTTTTAGTTTTTCAAAAGTCTATCGATATTCAGCGGCATAGTTGATCTTTTACA 30 6496821 0.977348276 9 28 235 0.928571429 1.290034611 0 0.3 0.5 30 2 1 39 2L:6496745-6496825 6 CG31638 FBtr0113411|FBtr0079262 6496119|6496064 6496988|6496988 TGATCT 6mer3-8 dme-bantam-3p 2L + 6496795 6496825 3'utr CG31638 FlyBase G1932.1 CGATATTCAGCGGCATAGTTGATCTTTTACA 21 6496821 0.634827359 4 20 154 0.911764706 1.491361694 0 0.380952381 0.617647059 21 3 0 31 2L:6496795-6496825 6 23 732 FBgn0051638 490.34 20.43333333 31.29333333 0.046906228 1.125611746 0.734980827 -7 -7 -7 0.1 dme-miR-318-3p 7mer-A1 CCAGTGA 2L 6526509 6526515 + 2L_6526509_6526515_+ 0.789238589 0.802902413 0.796070501 0.009661766 CG31637 FBtr0079287|FBtr0343155 6526013|6526013 6526996|6526919 2L + 6526490 6526536 3'utr CG31637 FlyBase G2458.1 TTTGGCTTAACAATGAAATCCAGTGATTTAGCATATAACAACCAAAA 279 6526517 0.699895692 4 277 1714 0.994252874 2.539076099 0.037356322 0.204301075 0.362068966 279 2 0 346 2L:6526490-6526536 7 CG31637 FBtr0343155|FBtr0079287 6526013|6526013 6526919|6526996 CCAGTGA 7mer-A1 dme-miR-318-3p 2L + 6526444 6526535 3'utr CG31637 FlyBase G1937.2 TACTTGGCTTTTTGATGTAAATTATTTAGGCAAACAACTTTTGTAATTTGGCTTAACAATGAAATCCAGTGATTTAGCATATAACAACCAAA 233 6526517 0.974547279 8 231 1439 0.994382022 2.549003262 0.061797753 0.394849785 0.603932584 233 2 0 354 2L:6526444-6526535 7 254 733 FBgn0051637 828.8433333 37.8 57.83 0.306451159 6.71957672 4.392183988 -8 -8 -8 0.1 dme-miR-965-3p 7mer-A1 ACGCTTA 2L 6564093 6564099 + 2L_6564093_6564099_+ 0.823349551 0.823349562 0.823349557 0 Ent2 FBtr0343158|FBtr0079290 6564072|6564072 6564709|6564396 2L + 6564077 6564117 3'utr Ent2 FlyBase G2469.1 TACATTTATTAGTATGACGCTTACTAACAATTTTCATTGTT 9 6564091 0.987977865 4 9 79 1 1 0 0.111111111 0.2 9 0 0 10 2L:6564077-6564117 7 Ent2 FBtr0343158|FBtr0079290 6564072|6564072 6564709|6564396 ACGCTTA 7mer-A1 dme-miR-965-3p 2L + 6564080 6564114 3'utr Ent2 FlyBase G1945.1 ATTTATTAGTATGACGCTTACTAACAATTTTCATT 6 6564091 0.674662479 3 6 54 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 2L:6564080-6564114 7 7 734 FBgn0263916 786.86 45.64666667 69.53333333 0.008896119 0.153351833 0.100671141 2 2 2 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2L 6564318 6564323 + 2L_6564318_6564323_+ 0.999745719 0.999774008 0.999759864 2.00E-05 Ent2 FBtr0343158|FBtr0079290 6564072|6564072 6564709|6564396 2L + 6564248 6564336 3'utr Ent2 FlyBase G2470.1 ATTTTAATAATATGGTGTCTAATATTTCATAGTTAGACTGCACACACATAAATTTAGTTTTGCGCTCAATTCTAGTTCTAGGACTAATC 14 6564317 0.985731552 6 14 121 1 1.204119983 0.125 0.142857143 0.25 14 0 0 16 2L:6564248-6564336 6 Ent2 FBtr0343158|FBtr0079290 6564072|6564072 6564709|6564396 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2L + 6564295 6564335 3'utr Ent2 FlyBase G1947.1 ATAAATTTAGTTTTGCGCTCAATTCTAGTTCTAGGACTAAT 6 6564317 0.987218298 2 6 52 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2L:6564295-6564335 6 7 735 FBgn0263916 786.86 45.64666667 69.53333333 0.008896119 0.153351833 0.100671141 1 1 1 0.1 dme-miR-1008-3p 8mer-A1 AGCTGTGA 2L 6564580 6564587 - 2L_6564580_6564587_- 0.539815627 0.622595356 0.581205492 0.058534158 CG13766 FBtr0343161|FBtr0079330 6564110|6564361 6565169|6565169 2L - 6564544 6564608 3'utr CG13766 FlyBase G8188.1 TTATTTCATTCAATCGGATGAAGCTGTGATAAAACGAACCAAATATTCCATTGACTTGTTAGACC 21 6564590 0.77547647 8 19 137 0.916666667 1.041392685 0.083333333 0.095238095 0.208333333 21 1 1 22 2L:6564544-6564608 8 CG13766 FBtr0079330|FBtr0343161 6564361|6564110 6565169|6565169 AGCTGTGA 8mer-A1 dme-miR-1008-3p 2L - 6564540 6564609 3'utr CG13766 FlyBase G6370.1 GTTATTTCATTCAATCGGATGAAGCTGTGATAAAACGAACCAAATATTCCATTGACTTGTTAGACCCCCT 24 6564590 0.862002143 7 17 119 0.625 0.920818754 0.3 0.458333333 0.675 24 13 2 25 2L:6564540-6564609 8 15.5 736 FBgn0031834 61.51666667 4.113333333 6.276666667 0.251964237 3.768233387 2.469463622 3 3 3 0.1 dme-bantam-3p 6mer3-8 TGATCT 2L 6616826 6616831 + 2L_6616826_6616831_+ 0.993846305 0.99531492 0.994580612 0.001038457 CG11050 FBtr0079291|FBtr0079293|FBtr0079292 6616512|6616512|6616512 6617117|6617117|6617117 2L + 6616785 6616890 3'utr CG11050 FlyBase G2486.1 AAGCGTAAAGTTGCGGATCGAATTCTATCGATATATTCAATTGATCTGACTAAGGAATCCAATTGTAAATAACTTAAACGAATTGTAGACTATTTAGAAAAAAATT 152 6616825 0.87082934 20 145 1160 0.957219251 1.65079304 0.07486631 0.210526316 0.35828877 152 5 3 179 2L:6616785-6616890 6 CG11050 FBtr0079292|FBtr0079293|FBtr0079291 6616512|6616512|6616512 6617117|6617117|6617117 TGATCT 6mer3-8 dme-bantam-3p 2L + 6616808 6616893 3'utr CG11050 FlyBase G1965.1 TCTATCGATATATTCAATTGATCTGACTAAGGAATCCAATTGTAAATAACTTAAACGAATTGTAGACTATTTAGAAAAAAATTATT 99 6616825 0.927291471 8 95 772 0.97260274 2.152288344 0.061643836 0.373737374 0.575342466 99 4 0 142 2L:6616808-6616893 6 85.5 737 FBgn0031836 528.79 32.3 48.86333333 0.161689896 2.647058824 1.749778293 1 1 1 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 6633068 6633075 - 2L_6633068_6633075_- 0.50011971 0.500115192 0.500117451 3.18E-06 CG31635 FBtr0331191|FBtr0331187 6632796|6632796 6634810|6634810 2L - 6633006 6633125 3'utr CG31635 FlyBase G8197.1 TGTTTCAACGTATCTTCATCAGTTAAGTGGAATTACTTAAAAAATGTACTGTACTTAATTTACAAATAGTTGATATTTCTGGTGCTTACCGGTCGCTAGAAGTTTGCCTTAAACTAGATC 79 6633076 0.790901547 18 76 710 0.966666667 1.939519253 0.088888889 0.139240506 0.244444444 79 3 0 87 2L:6633006-6633125 8 CG31635 FBtr0331187|FBtr0331191 6632796|6632796 6634810|6634810 GTACTTAA 8mer-A1 dme-miR-252-5p 2L - 6632999 6633091 3'utr CG31635 FlyBase G6376.1 ACTTAAAAAATGTACTGTACTTAATTTACAAATAGTTGATATTTCTGGTGCTTACCGGTCGCTAGAAGTTTGCCTTAAACTAGATCCCCGTTT 38 6633076 0.989174555 5 36 344 0.965517241 1.447158031 0.034482759 0.394736842 0.603448276 38 1 1 56 2L:6632999-6633091 8 44 738 FBgn0051635 607.7033333 10.19333333 15.53666667 0.07240375 4.316546763 2.832010298 1 1 1 0.1 dme-bantam-3p 8mer-A1 TGATCTCA 2L 6633661 6633668 - 2L_6633661_6633668_- 0.631091247 0.630955403 0.631023325 9.60E-05 CG31635 FBtr0331191|FBtr0331187 6632796|6632796 6634810|6634810 2L - 6633592 6633723 3'utr CG31635 FlyBase G8200.1 TTAACAACGGAAATGAAGCGCAAACGAAAACAAAAGTACCCAAAATAAATCCAATTGATCTCATTATGTGATATTTGTCGTAGTGCCCAAAGCGTTCACTGTACGTGTATCTATAACCAAACCATACCATAT 484 6633669 0.989510946 23 450 4377 0.931389365 2.035829825 0.015437393 0.17768595 0.317324185 484 36 4 543 2L:6633592-6633723 8 CG31635 FBtr0331187|FBtr0331191 6632796|6632796 6634810|6634810 TGATCTCA 8mer-A1 dme-bantam-3p 2L - 6633542 6633721 3'utr CG31635 FlyBase G6379.1 AACAACGGAAATGAAGCGCAAACGAAAACAAAAGTACCCAAAATAAATCCAATTGATCTCATTATGTGATATTTGTCGTAGTGCCCAAAGCGTTCACTGTACGTGTATCTATAACCAAACCATACCATATGAGTTAAGTACAGGGTGTGTACATTCGAACACTTTTGCTCTAAGTAAACT 369 6633669 0.987791287 26 340 3224 0.919847328 1.984077034 0.04389313 0.319783198 0.520992366 369 38 4 482 2L:6633542-6633721 8 394.5 739 FBgn0051635 607.7033333 10.19333333 15.53666667 0.649165437 38.70176586 25.39154688 1 1 1 0.1 dme-miR-252-5p 7mer-m8 GTACTTA 2L 6634160 6634166 - 2L_6634160_6634166_- 0.588299314 0.588299841 0.588299577 3.54E-07 CG31635 FBtr0331191|FBtr0331187 6632796|6632796 6634810|6634810 2L - 6634134 6634185 3'utr CG31635 FlyBase G8202.1 TCGTGTGGATGAAAAATTTGTACTTACCGATTCAAATGAATACTTACTGAAA 14 6634167 0.986717499 4 13 106 0.9375 1.176091259 0.6875 0.071428571 0.1875 14 1 0 15 2L:6634134-6634185 7 CG31635 FBtr0331187|FBtr0331191 6632796|6632796 6634810|6634810 GTACTTA 7mer-m8 dme-miR-252-5p 2L - 6634147 6634184 3'utr CG31635 FlyBase G6381.1 CGTGTGGATGAAAAATTTGTACTTACCGATTCAAATGA 11 6634167 0.70245094 3 11 86 1 1.230448921 0.294117647 0.454545455 0.647058824 11 0 0 17 2L:6634147-6634184 7 11.5 740 FBgn0051635 607.7033333 10.19333333 15.53666667 0.018923707 1.128188358 0.74018451 1 1 1 0.1 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 6635598 6635605 - 2L_6635598_6635605_- 0.631135753 0.631135431 0.631135592 2.83E-07 CG31635 FBtr0079326|FBtr0331188|FBtr0331189|FBtr0331190 6635543|6635543|6635543|6635543 6635647|6635647|6635647|6635647 2L - 6635560 6635624 5'utr CG31635 FlyBase G8204.1 TATATACAAAGGGGATAATTCTAGTCATAAAGGAACCATAATATTTGAAGAATTCTCTATAAATG 125 6635606 0.700874894 8 121 720 0.950704225 1.653212514 0.232394366 0.112 0.218309859 125 5 2 135 2L:6635560-6635624 8 CG31635 FBtr0331188|FBtr0079326|FBtr0331190|FBtr0331189 6635543|6635543|6635543|6635543 6635647|6635647|6635647|6635647 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 6635564 6635619 5'utr CG31635 FlyBase G6382.1 ACAAAGGGGATAATTCTAGTCATAAAGGAACCATAATATTTGAAGAATTCTCTATA 52 6635606 0.973309407 6 47 288 0.915492958 1.210853365 0.197183099 0.346153846 0.521126761 52 3 3 65 2L:6635564-6635619 8 85.5 741 FBgn0051635 607.7033333 10.19333333 15.53666667 0.14069365 8.387835186 5.50311092 1 1 1 0.1 dme-miR-317-3p 8mer-A1 TGTGTTCA 2L 6661963 6661970 + 2L_6661963_6661970_+ 0.631136761 0.63113651 0.631136635 2.12E-07 CG11070 FBtr0079297 6661698 6662033 2L + 6661921 6661994 3'utr CG11070 FlyBase G2512.1 AATAACATGCAAAGGATAAATTATTGTAGTCATATTTGGTTTTGTGTTCACAATATGTTTACATATATGTTTAA 29 6661962 0.992589672 8 28 324 0.970588235 1.217483944 0.058823529 0.137931034 0.264705882 29 0 1 33 2L:6661921-6661994 8 CG11070 FBtr0079297 6661698 6662033 TGTGTTCA 8mer-A1 dme-miR-317-3p 2L + 6661921 6661994 3'utr CG11070 FlyBase G1988.1 AATAACATGCAAAGGATAAATTATTGTAGTCATATTTGGTTTTGTGTTCACAATATGTTTACATATATGTTTAA 21 6661962 0.957462311 4 20 220 0.944444444 1.531478917 0.111111111 0.571428571 0.75 21 2 0 34 2L:6661921-6661994 8 21 742 FBgn0028467 522.98 18.67666667 28.61666667 0.040154499 1.124397644 0.73383809 1 1 1 0.1 dme-miR-317-3p 8mer-A1 TGTGTTCA 2L 6674670 6674677 + 2L_6674670_6674677_+ 0.631068519 0.630597846 0.630833183 0.000332835 CG34310 FBtr0346453|FBtr0333516 6674524|6674524 6674780|6674780 2L + 6674496 6674706 stop_codon CG34310 FlyBase G2535.1 GAGTCAAGACCCAAACGGAGCGAATATTGAGCCAAGGCTGCCAGTGCCGTCATAGACATCTTTACATACTTATAGCCTAGTGATTAGTTACCAAATTTCAACGCTGTAACATGGTGAACAATGAATGGACTTTTACTTTCTTACCTTCACTTTGGGTGGAGAGGCCCATCTTCTTGTGTTCATTTTAGAGTTAAACAGAATGGATTTTTTA 157 6674669 0.988137635 25 145 1320 0.934065934 1.62838893 0.065934066 0.133757962 0.252747253 157 9 3 170 2L:6674496-6674706 8 CG34310 FBtr0333516|FBtr0346453 6674524|6674524 6674780|6674780 TGTGTTCA 8mer-A1 dme-miR-317-3p 2L + 6674644 6674696 3'utr CG34310 FlyBase G2004.2 ACTTTGGGTGGAGAGGCCCATCTTCTTGTGTTCATTTTAGAGTTAAACAGAAT 44 6674669 0.675670051 8 42 479 0.944444444 1.707570176 0.092592593 0.204545455 0.351851852 44 3 0 51 2L:6674644-6674696 8 46 743 FBgn0085339 513.3133333 76.24666667 117.4333333 0.089613881 0.603305063 0.391711609 1 1 1 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2L 6674759 6674764 + 2L_6674759_6674764_+ 0.957461892 0.999996544 0.978729218 0.030076504 CG34310 FBtr0346453|FBtr0333516 6674524|6674524 6674780|6674780 2L + 6674744 6674770 3'utr CG34310 FlyBase G2536.1 AAATGGTTTGAATAAAAGACTAGAAAC 8 6674751 0.59418431 5 8 36 1 1.079181246 0.166666667 0.375 0.583333333 8 0 0 12 2L:6674744-6674770 6 CG34310 FBtr0333516|FBtr0346453 6674524|6674524 6674780|6674780 AAGACT 6mer3-8 dme-miR-14-3p 2L + 6674712 6674769 3'utr CG34310 FlyBase G2005.1 GTAATATGAATTGAATAAATAATGAAAAGCACAAATGGTTTGAATAAAAGACTAGAAA 7 6674752 0.964214738 6 7 35 1 1 0 0.428571429 0.6 7 0 0 10 2L:6674712-6674769 6 6.5 744 FBgn0085339 513.3133333 76.24666667 117.4333333 0.012662831 0.085249628 0.055350554 8 7 7.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 2L 6677978 6677983 - 2L_6677978_6677983_- 0.998725434 0.998861932 0.998793683 9.65E-05 Nhe3 FBtr0300327|FBtr0273247|FBtr0273248|FBtr0333348|FBtr0273250 6677833|6677833|6677833|6677833|6677833 6678146|6679193|6678723|6679064|6678723 2L - 6677862 6678007 3'utr Nhe3 FlyBase G8244.1 AAGTTTCAAAGCTGATTCACTTGCTGATCTATAACATTTTCCGATATTACCTAGGACCCTCCTATTTCTTACTATATATACGCTGTATTTAAAACAAAGCGAAGCTCTCTGAAAATATTAATTGTTGTGCTGTTAATTTTTAAGTC 63 6677986 0.987220525 14 62 544 0.987179487 1.886490725 0.051282051 0.206349206 0.358974359 63 1 0 77 2L:6677862-6678007 6 Nhe3 FBtr0273250|FBtr0300327|FBtr0273247|FBtr0273248|FBtr0333348 6677833|6677833|6677833|6677833|6677833 6678723|6678146|6679193|6678723|6679064 TGATCT 6mer3-8 dme-bantam-3p 2L - 6677964 6678039 3'utr Nhe3 FlyBase G6411.1 AAAACGGACTAATTGTATTCGGTTTAGTTTTTAAGTTTCAAAGCTGATTCACTTGCTGATCTATAACATTTTCCGA 56 6677986 0.789584705 6 56 469 1 1.908485019 0.061728395 0.392857143 0.580246914 56 0 0 81 2L:6677964-6678039 6 51.5 745 FBgn0028703 495.63 20.01 30.39666667 0.103908157 2.573713143 1.694264722 3 3 3 0.1 dme-miR-79-3p 7mer-m8 TAGCTTT 2L 6678077 6678083 - 2L_6678077_6678083_- 0.620203991 0.619824015 0.620014003 0.000268701 Nhe3 FBtr0300327|FBtr0273247|FBtr0273248|FBtr0333348|FBtr0273250 6677833|6677833|6677833|6677833|6677833 6678146|6679193|6678723|6679064|6678723 2L - 6678064 6678097 3'utr Nhe3 FlyBase G8245.1 ACAACATAAACTTATAGCTTTTTCGTTCTAAGCC 16 6678076 0.625529767 4 15 148 0.954545455 1.322219295 0 0.375 0.545454545 16 1 0 21 2L:6678064-6678097 7 Nhe3 FBtr0273250|FBtr0300327|FBtr0273247|FBtr0273248|FBtr0333348 6677833|6677833|6677833|6677833|6677833 6678723|6678146|6679193|6678723|6679064 TAGCTTT 7mer-m8 dme-miR-79-3p 2L - 6678049 6678095 3'utr Nhe3 FlyBase G6412.1 AACATAAACTTATAGCTTTTTCGTTCTAAGCCAGTTAGTGTAAATAT 12 6678076 0.963675839 3 11 113 0.842105263 1.204119983 0 0.416666667 0.631578947 12 3 0 16 2L:6678049-6678095 7 13 746 FBgn0028703 495.63 20.01 30.39666667 0.026229244 0.649675162 0.427678474 -7 -7 -7 0.1 dme-miR-932-5p 6mer2-7 GAATTG 2L 6678682 6678687 - 2L_6678682_6678687_- 0.999994591 0.999998368 0.999996479 2.69E-06 Nhe3 FBtr0273247|FBtr0273248|FBtr0273250 6677833|6677833|6677833 6679193|6678723|6678723 2L - 6678624 6678702 3'utr Nhe3 FlyBase G8247.2 CTTTTGTTATTTATTGAATTGGTCTCAACTGAAATCGAAAATGTGAAAACTGTACAAATTAGAATATTACTTTTCAGTT 259 6678684 0.724330692 19 240 2028 0.93015873 1.68871637 0.174603175 0.181467181 0.326984127 259 17 5 293 2L:6678624-6678702 6 Nhe3 FBtr0273250|FBtr0273247|FBtr0273248 6677833|6677833|6677833 6678723|6679193|6678723 GAATTG 6mer2-7 dme-miR-932-5p 2L - 6678630 6678709 3'utr Nhe3 FlyBase G6416.1 TAGTTTTCTTTTGTTATTTATTGAATTGGTCTCAACTGAAATCGAAAATGTGAAAACTGTACAAATTAGAATATTACTTT 182 6678684 0.722392589 16 177 1385 0.97080292 2.123851641 0.142335766 0.357142857 0.572992701 182 7 1 266 2L:6678630-6678709 6 159 747 FBgn0028703 495.63 20.01 30.39666667 0.320803825 7.946026987 5.230836715 -3 -3 -3 0.1 dme-miR-8-3p 6mer3-8 CAGTAT 2L 6679652 6679657 - 2L_6679652_6679657_- 0.999999686 0.999997831 0.999998759 1.34E-06 Nhe3 FBtr0333347 6679319 6679922 2L - 6679631 6679707 3'utr Nhe3 FlyBase G8249.1 AATGTTAAATTTTGTGGTATAAGCGGAAGTGATGGATAAGTTACACCCTTCAGTATGGTTGACTAATTGTTTAAGTT 21 6679658 0.793852309 9 18 171 0.869565217 1.301029996 0.173913043 0.095238095 0.173913043 21 3 0 20 2L:6679631-6679707 6 Nhe3 FBtr0333347 6679319 6679922 CAGTAT 6mer3-8 dme-miR-8-3p 2L - 6679637 6679671 3'utr Nhe3 FlyBase G6418.1 TAAGTTACACCCTTCAGTATGGTTGACTAATTGTT 22 6679659 0.795544405 5 21 166 0.967741935 1.477121255 0.258064516 0.318181818 0.516129032 22 1 0 30 2L:6679637-6679671 6 17.5 748 FBgn0028703 495.63 20.01 30.39666667 0.035308597 0.874562719 0.575721022 1 2 1.5 0.1 dme-miR-932-5p 6mer2-7 GAATTG 2L 6679758 6679763 - 2L_6679758_6679763_- 0.959780603 0.997574284 0.978677443 0.026724182 Nhe3 FBtr0333347 6679319 6679922 2L - 6679745 6679810 3'utr Nhe3 FlyBase G8250.1 TGAATCTACACCACAGAGACTTTGGCAAAGTAGACGTATTATTGTATGAATTGGCCGTGAAAATGT 59 6679759 0.790946292 8 59 311 1 1.875061263 0.08 0.237288136 0.4 59 0 0 75 2L:6679745-6679810 6 Nhe3 FBtr0333347 6679319 6679922 GAATTG 6mer2-7 dme-miR-932-5p 2L - 6679745 6679807 3'utr Nhe3 FlyBase G6419.1 ATCTACACCACAGAGACTTTGGCAAAGTAGACGTATTATTGTATGAATTGGCCGTGAAAATGT 36 6679759 0.750003471 7 35 176 1 1.662757832 0.065217391 0.25 0.413043478 36 0 0 46 2L:6679745-6679807 6 31 749 FBgn0028703 495.63 20.01 30.39666667 0.062546658 1.549225387 1.019848668 -4 -4 -4 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2L 6679889 6679894 - 2L_6679889_6679894_- 0.91204362 0.922579925 0.917311772 0.007450289 Nhe3 FBtr0333347 6679319 6679922 2L - 6679854 6679929 stop_codon Nhe3 FlyBase G8251.1 TGAATAACCGAATGAGCGAAGCACCCCAGACACCAAAGACTAATCTAAGCGTAGCAAGCTGGCCACTAACAAAGAA 8 6679870 0.859293783 4 8 20 1 0.954242509 0.222222222 0.125 0.222222222 8 0 0 9 2L:6679854-6679929 6 Nhe3 FBtr0333347 6679319 6679922 AAGACT 6mer3-8 dme-miR-14-3p 2L - 6679859 6679915 3'utr Nhe3 FlyBase G6420.1 AGCGAAGCACCCCAGACACCAAAGACTAATCTAAGCGTAGCAAGCTGGCCACTAACA 7 6679886 0.770125506 4 6 12 1 1 0.2 0.428571429 0.6 7 0 0 10 2L:6679859-6679915 6 3.5 750 FBgn0028703 495.63 20.01 30.39666667 0.007061719 0.174912544 0.115144204 -24 -8 -16 0.1 dme-miR-318-3p 6mer3-8 CCCAGT 2L 6720349 6720354 - 2L_6720349_6720354_- 0.969404826 0.998978461 0.984191644 0.020911764 homer FBtr0329892|FBtr0333346|FBtr0079307 6719392|6719894|6719894 6721023|6721023|6721023 2L - 6720304 6720370 3'utr homer FlyBase G8262.1 TGAATGTATACCTATGCCCAGTATTTCGTCAAAATTCTTCGAGTCCTTGTGACACTGATGTAGGTCC 15 6720356 0.984437746 7 15 121 1 1.278753601 0 0.2 0.368421053 15 0 0 19 2L:6720304-6720370 6 homer FBtr0079307|FBtr0333346|FBtr0329892 6719894|6719894|6719392 6721023|6721023|6721023 CCCAGT 6mer3-8 dme-miR-318-3p 2L - 6720306 6720372 3'utr homer FlyBase G6429.1 ATTGAATGTATACCTATGCCCAGTATTTCGTCAAAATTCTTCGAGTCCTTGTGACACTGATGTAGGT 11 6720357 0.985145773 7 11 95 1 1.322219295 0 0.545454545 0.761904762 11 0 0 21 2L:6720306-6720372 6 10 751 FBgn0025777 829.61 37.73333333 57.58 0.012053857 0.265017668 0.173671414 2 3 2.5 0.1 dme-miR-92b-3p 7mer-A1 TGCAATA 2L 6731159 6731165 + 2L_6731159_6731165_+ 0.782165987 0.454749489 0.618457738 0.231518427 Liprin-alpha FBtr0329942|FBtr0079301|FBtr0329943|FBtr0329941|FBtr0079300 6730687|6730687|6730726|6730687|6730687 6731600|6731600|6731345|6732766|6731345 2L + 6731140 6731235 3'utr Liprin-alpha FlyBase G2561.1 TATATAGTGTAATTGGGCTTGCAATAGACTAACAGTATTTTGTTTTAGATGATGCAGAGGTGGAAAGAGATGACAGCGTGCTTCGAACCAAATTCG 45 6731164 0.95946612 12 42 288 0.947368421 1.431363764 0.333333333 0.222222222 0.385964912 45 2 1 54 2L:6731140-6731235 7 Liprin-alpha FBtr0329942|FBtr0079300|FBtr0329941|FBtr0329943|FBtr0079301 6730687|6730687|6730687|6730726|6730687 6731600|6731345|6732766|6731345|6731600 TGCAATA 7mer-A1 dme-miR-92b-3p 2L + 6731138 6731194 3'utr Liprin-alpha FlyBase G2021.1 TTTATATAGTGTAATTGGGCTTGCAATAGACTAACAGTATTTTGTTTTAGATGATGC 35 6731164 0.797664604 9 35 259 1 1.716003344 0.346153846 0.4 0.596153846 35 0 0 52 2L:6731138-6731194 7 33 752 FBgn0046704 1858.986667 39.04 59.95333333 0.017751607 0.845286885 0.550428111 -5 -5 -5 0.1 dme-miR-252-5p 7mer-m8 GTACTTA 2L 6731985 6731991 + 2L_6731985_6731991_+ 0.588291003 0.588293691 0.588292347 1.91E-06 Liprin-alpha FBtr0329941 6730687 6732766 2L + 6731974 6732012 3'utr Liprin-alpha FlyBase G2564.1 AAGTTTTGCATGTACTTACTTTCCCTTTATACGTTAAAG 15 6731984 0.930055824 2 15 169 1 1.230448921 0.058823529 0.133333333 0.235294118 15 0 0 17 2L:6731974-6732012 7 Liprin-alpha FBtr0329941 6730687 6732766 GTACTTA 7mer-m8 dme-miR-252-5p 2L + 6731971 6732008 3'utr Liprin-alpha FlyBase G2023.1 TTTAAGTTTTGCATGTACTTACTTTCCCTTTATACGTT 15 6731984 0.811510161 3 14 165 0.9 1.255272505 0 0.266666667 0.45 15 2 0 18 2L:6731971-6732008 7 15 753 FBgn0046704 1858.986667 39.04 59.95333333 0.008068912 0.384221311 0.250194596 1 1 1 0.1 dme-miR-965-3p 6mer2-7 ACGCTT 2L 6732131 6732136 + 2L_6732131_6732136_+ 0.999999984 0.999990229 0.999995106 6.93E-06 Liprin-alpha FBtr0329941 6730687 6732766 2L + 6732103 6732144 3'utr Liprin-alpha FlyBase G2565.1 TGTGTACAAAAAACCAAAATTGCAACTAACGCTTGTCCTTAA 6 6732128 0.984046085 4 5 41 0.857142857 0.77815125 0.285714286 0.166666667 0.285714286 6 1 0 6 2L:6732103-6732144 6 Liprin-alpha FBtr0329941 6730687 6732766 ACGCTT 6mer2-7 dme-miR-965-3p 2L + 6732117 6732148 3'utr Liprin-alpha FlyBase G2024.1 CAAAATTGCAACTAACGCTTGTCCTTAAGTTG 5 6732129 0.896368235 2 5 36 1 0.903089987 0.125 0.4 0.625 5 0 0 8 2L:6732117-6732148 6 5.5 754 FBgn0046704 1858.986667 39.04 59.95333333 0.002958601 0.140881148 0.091738018 3 2 2.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 2L 6778791 6778796 - 2L_6778791_6778796_- 0.999998912 0.999999605 0.999999258 4.95E-07 nrv1 FBtr0079384 6778553 6779372 2L - 6778772 6778815 3'utr nrv1 FlyBase G8266.1 CATGGAGAACGAAACATTTTGATCTAAGCTGAATGTCGATTATT 41 6778797 0.656066173 7 38 280 0.936170213 1.643452676 0.234042553 0.12195122 0.234042553 41 3 0 44 2L:6778772-6778815 6 nrv1 FBtr0079384 6778553 6779372 TGATCT 6mer3-8 dme-bantam-3p 2L - 6778772 6778814 3'utr nrv1 FlyBase G6432.1 ATGGAGAACGAAACATTTTGATCTAAGCTGAATGTCGATTATT 32 6778797 0.633711496 8 30 216 0.923076923 1.681241237 0.307692308 0.53125 0.711538462 32 4 0 48 2L:6778772-6778814 6 36 755 FBgn0015776 3384.113333 195.7933333 300.12 0.010637942 0.183867343 0.119952019 1 1 1 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 2L 6778857 6778863 - 2L_6778857_6778863_- 0.782911777 0.782911806 0.782911791 0 nrv1 FBtr0332370|FBtr0079384 6778822|6778553 6779372|6779372 2L - 6778837 6778966 3'utr nrv1 FlyBase G8267.1 GATCATTATTTTCTGTCAGTTGTATTTAGTTTTAATTTATAAATGTTGAAACATGCCCGAAAAATTCTTTGTTTCCCGCACATCGCCTAGGCTTGTTCAATTTGTACAAAGAAGCAACTAAATAAATTAT 76 6778865 0.994659181 15 75 482 0.989583333 1.977723605 0.354166667 0.210526316 0.375 76 1 0 95 2L:6778837-6778966 7 nrv1 FBtr0332370|FBtr0079384 6778822|6778553 6779372|6779372 GTACAAA 7mer-A1 dme-miR-305-5p 2L - 6778844 6778927 3'utr nrv1 FlyBase G6433.1 TAAATGTTGAAACATGCCCGAAAAATTCTTTGTTTCCCGCACATCGCCTAGGCTTGTTCAATTTGTACAAAGAAGCAACTAAAT 59 6778865 0.987244447 7 58 353 0.9875 1.897627091 0.1875 0.271186441 0.4625 59 1 0 79 2L:6778844-6778927 7 34.5 756 FBgn0015776 3384.113333 195.7933333 300.12 0.010194694 0.176206204 0.114954018 2 2 2 0.1 dme-miR-79-3p 7mer-m8 TAGCTTT 2L 6779040 6779046 - 2L_6779040_6779046_- 0.619243582 0.505741983 0.562492783 0.080257751 nrv1 FBtr0332370|FBtr0079384 6778822|6778553 6779372|6779372 2L - 6779030 6779141 3'utr nrv1 FlyBase G8268.1 CGTCAATTGAACTCTGAACATCTGGCCTAATAGAGAAATAGAAAGTCGAAAATCTTGAAATTAAAGTTCAAATCGTACACACGCAATTGTTGTTATAGCTTTTAGCTTGTCT 53 6779055 0.838812859 19 51 412 0.967213115 1.469822016 0.147540984 0.113207547 0.229508197 53 1 1 59 2L:6779030-6779141 7 nrv1 FBtr0332370|FBtr0079384 6778822|6778553 6779372|6779372 TAGCTTT 7mer-m8 dme-miR-79-3p 2L - 6778988 6779162 3'utr nrv1 FlyBase G6434.1 CGAAGGAATGATCCGACCGATCGTCAATTGAACTCTGAACATCTGGCCTAATAGAGAAATAGAAAGTCGAAAATCTTGAAATTAAAGTTCAAATCGTACACACGCAATTGTTGTTATAGCTTTTAGCTTGTCTATTGCTATCAGTTATTATTATTAATATTTATCATATTATTTC 36 6779055 0.983199472 18 35 305 1 1.707570176 0.196078431 0.361111111 0.549019608 36 0 0 51 2L:6778988-6779162 7 19.5 757 FBgn0015776 3384.113333 195.7933333 300.12 0.005762218 0.099594811 0.06497401 9 9 9 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2L 6779337 6779342 - 2L_6779337_6779342_- 0.99987674 0.999873351 0.999875046 2.33E-06 nrv1 FBtr0332370|FBtr0332370|FBtr0332370|FBtr0079384|FBtr0079384|FBtr0079384 6778822|6778822|6778822|6778553|6778553|6778553 6779372|6779372|6779372|6779372|6779372|6779372 2L - 6779330 6779434 stop_codon nrv1 FlyBase G8269.3 AGTACAGTGGCAGTGTCCGCGATCGCAAGGGCTCCGTGACCTTCCAGATCCTCCTGGACTAAGTGCGGGGAATGGGAATCATGTCGCCAACTTGTGATCGCAGCA 451 6779343 0.948859175 12 397 2243 0.880067568 1.06362521 0.170608108 0.241685144 0.422297297 451 27 44 521 2L:6779330-6779434 6 nrv1 FBtr0332370|FBtr0332370|FBtr0332370|FBtr0079384|FBtr0079384|FBtr0079384 6778822|6778822|6778822|6778553|6778553|6778553 6779372|6779372|6779372|6779372|6779372|6779372 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 6779330 6779371 3'utr nrv1 FlyBase G6435.2 TGCGGGGAATGGGAATCATGTCGCCAACTTGTGATCGCAGCA 323 6779343 0.774536091 5 286 1619 0.87755102 1 0.16122449 0.359133127 0.57755102 323 18 42 430 2L:6779330-6779371 6 377.5 758 FBgn0015776 3384.113333 195.7933333 300.12 0.111550638 1.92805339 1.257830201 1 1 1 0.1 dme-miR-305-5p 8mer-A1 AGTACAAA 2L 6906875 6906882 - 2L_6906875_6906882_- 0.605652132 0.605653969 0.605653051 1.34E-06 CG13773 FBtr0079372 6906664 6906917 2L - 6906862 6906910 3'utr CG13773 FlyBase G8287.1 ACCTTTCGTTTTTAACATCTCTGTATATAGTACAAATTAACAATTACAT 46 6906885 0.781638653 6 45 438 0.980392157 1.397940009 0.098039216 0.086956522 0.176470588 46 0 1 50 2L:6906862-6906910 8 CG13773 FBtr0079372 6906664 6906917 AGTACAAA 8mer-A1 dme-miR-305-5p 2L - 6906870 6906908 3'utr CG13773 FlyBase G6451.1 CTTTCGTTTTTAACATCTCTGTATATAGTACAAATTAAC 14 6906885 0.726582326 5 12 129 0.909090909 1 0 0.428571429 0.636363636 14 1 1 20 2L:6906870-6906908 8 30 759 FBgn0042092 166.9866667 19.41666667 29.97666667 0.179655062 1.545064378 1.000778383 3 3 3 0.1 dme-miR-8-3p 6mer2-7 AGTATT 2L 6911429 6911434 - 2L_6911429_6911434_- 1 1 1 0 Wee1 FBtr0332329|FBtr0079371 6911088|6911341 6911700|6911700 2L - 6911390 6911465 3'utr Wee1 FlyBase G8291.1 TAAACTTTAAGATTCTCGCATAGTTGTAATGAGTATTGTTTTCGAAATTAAAATATTTATTATGTTACATGGAAAT 11 6911432 0.986513279 8 11 96 1 1.176091259 0.133333333 0.272727273 0.466666667 11 0 0 15 2L:6911390-6911465 6 Wee1 FBtr0332329|FBtr0079371 6911088|6911341 6911700|6911700 AGTATT 6mer2-7 dme-miR-8-3p 2L - 6911413 6911448 3'utr Wee1 FlyBase G6455.1 GCATAGTTGTAATGAGTATTGTTTTCGAAATTAAAA 7 6911429 0.951315344 4 6 62 1 1 0.2 0.428571429 0.6 7 0 0 10 2L:6911413-6911448 6 6 760 FBgn0011737 492.04 24.44666667 37.58666667 0.012194131 0.245432233 0.159631075 -2 -5 -3.5 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 2L 6911628 6911633 - 2L_6911628_6911633_- 0.99999994 0.999999949 0.999999944 0 Wee1 FBtr0332329|FBtr0079371 6911088|6911341 6911700|6911700 2L - 6911609 6911700 3'utr Wee1 FlyBase G8293.1 TAAGCTCGCAACAGATGCCGAACCGATAGCTAAACTCTTCCGAATCGAACGTGAACTAAGCTCACATTGTGTTACCTTTTAAGCGTATTCAT 95 6911633 0.98104352 11 93 633 0.98245614 2.049218023 0.140350877 0.178947368 0.315789474 95 2 0 112 2L:6911609-6911700 6 Wee1 FBtr0332329|FBtr0079371 6911088|6911341 6911700|6911700 TGTGTT 6mer3-8 dme-miR-317-3p 2L - 6911608 6911708 stop_codon Wee1 FlyBase G6456.1 ATATCTGATAAGCTCGCAACAGATGCCGAACCGATAGCTAAACTCTTCCGAATCGAACGTGAACTAAGCTCACATTGTGTTACCTTTTAAGCGTATTCATA 53 6911634 0.962293907 9 52 361 0.977272727 1.934498451 0.284090909 0.433962264 0.659090909 53 2 0 86 2L:6911608-6911708 6 43.5 761 FBgn0011737 492.04 24.44666667 37.58666667 0.088407447 1.779383692 1.157325293 0 1 0.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 6914654 6914661 - 2L_6914654_6914661_- 0.631136649 0.631136595 0.631136622 0 x16 FBtr0079368|FBtr0332328 6914379|6914299 6915042|6915042 2L - 6914548 6914677 3'utr x16 FlyBase G8311.1 AGCCGCAGATTAACGATCTAGTCAGGATTGCTATGTAAATTGATTTGCCTTGGATTTTATTTTGCTTACCCTGGAATTATACTCGAATGTGCAGAGGACGAAGCATCGCCACCATTTTCATGTCAATTTT 31 6914661 0.934813068 10 29 222 0.941176471 1.204119983 0.205882353 0.096774194 0.176470588 31 1 1 32 2L:6914548-6914677 8 x16 FBtr0079368|FBtr0332328 6914379|6914299 6915042|6915042 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 6914622 6914703 3'utr x16 FlyBase G6467.1 AATTTAAGATATAGAAATGTATCGGCAGCCGCAGATTAACGATCTAGTCAGGATTGCTATGTAAATTGATTTGCCTTGGATT 28 6914667 0.972373818 9 27 162 0.977272727 1.633468456 0.318181818 0.464285714 0.659090909 28 1 0 43 2L:6914622-6914703 8 21 762 FBgn0028554 1073.163333 75.76666667 116.1166667 0.019568317 0.27716674 0.180852591 0 6 3 0.1 dme-miR-980-5p 7mer-m1 AAAAACT 2L 6926732 6926738 + 2L_6926732_6926738_+ 0.764696737 0.76339448 0.764045608 0.000920794 Hrb27C FBtr0307032|FBtr0079346|FBtr0307031|FBtr0307030 6925454|6925454|6925454|6925454 6932057|6926806|6926806|6928675 2L + 6926693 6926802 3'utr Hrb27C FlyBase G2636.2 TATGGAAACCAACAAAACACACTCTTAACCAATATACATAAAAACTATAAACATACTTATAAACAATATATATATATATATATTTAAAGCGAGTATATATATATAAAAGG 57 6926725 0.812491577 12 49 292 0.928571429 1.511883361 0.042857143 0.140350877 0.3 57 4 1 65 2L:6926693-6926802 7 Hrb27C FBtr0307030|FBtr0079346|FBtr0307031|FBtr0307032 6925454|6925454|6925454|6925454 6928675|6926806|6926806|6932057 AAAAACT 7mer-m1 dme-miR-980-5p 2L + 6926628 6926744 3'utr Hrb27C FlyBase G2077.1 TATTTAGTTAAAGCGAAATGAAAGAGCCAAGCAGCAGCAGCATGATAATGATTGATTATAATGGATATGGAAACCAACAAAACACACTCTTAACCAATATACATAAAAACTATAAAC 63 6926725 0.988588256 13 59 271 0.964705882 1.913813852 0.211764706 0.317460317 0.494117647 63 3 0 82 2L:6926628-6926744 7 29.5 763 FBgn0004838 17779.86667 540.8 834.9466667 0.00165918 0.054548817 0.035331598 7 7 7 0.1 dme-miR-317-3p 6mer2-7 GTGTTC 2L 6927649 6927654 + 2L_6927649_6927654_+ 0.984065541 0.96722354 0.975644541 0.011909092 Hrb27C FBtr0307032|FBtr0307030 6925454|6925454 6932057|6928675 2L + 6927607 6927840 3'utr Hrb27C FlyBase G2640.2 AATACAAATACTTTACTTTATTTTTCGGTGATTTATTGCTTAGTGTTCTTCGTATAATTTGTACTCTACTACAACAAAACAAATCCTACAGTTATAAATTCCTAATTTAATTTTGTTTAAATTACAAATACATATGCTTACATTTTATAACTAATTATACAATTTTTAAAAAATACCAACACAAAACAAAAGCAAAAGCGCTAAAACAATGAGTAAACAAGTAAAGTAAACGTG 451 6927639 0.987752877 40 428 5423 0.952117864 1.759248034 0.303867403 0.179600887 0.318600368 451 18 8 517 2L:6927607-6927840 6 Hrb27C FBtr0307030|FBtr0307032 6925454|6925454 6928675|6932057 GTGTTC 6mer2-7 dme-miR-317-3p 2L + 6927516 6927700 3'utr Hrb27C FlyBase G2081.1 AATTTTTTCTATTAAAGTACCATACACTAATTTTTAATTTGTTTATTTACAACAAATCAACTTACAATACATACATTTAATTACAATATACAATACAAATACTTTACTTTATTTTTCGGTGATTTATTGCTTAGTGTTCTTCGTATAATTTGTACTCTACTACAACAAAACAAATCCTACAGTTA 291 6927639 0.993927397 36 278 3552 0.960556845 2.315970345 0.236658933 0.343642612 0.556844548 291 16 1 414 2L:6927516-6927700 6 180.5 764 FBgn0004838 17779.86667 540.8 834.9466667 0.010151932 0.333764793 0.216181473 10 10 10 0.1 dme-miR-305-5p 7mer-m1 GTACAAT 2L 6943798 6943804 - 2L_6943798_6943804_- 0.765090176 0.765586663 0.765338419 0.000351079 Fgop2 FBtr0079366|FBtr0332325 6943738|6943176 6944048|6944048 2L - 6943777 6943815 3'utr Fgop2 FlyBase G8331.1 ACAAATGTAATGTACAATGTACCCTGTCGATTTTATGGT 7 6943798 0.763987188 3 7 50 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 2L:6943777-6943815 7 Fgop2 FBtr0332325|FBtr0079366 6943176|6943738 6944048|6944048 GTACAAT 7mer-m1 dme-miR-305-5p 2L - 6943774 6943813 3'utr Fgop2 FlyBase G6484.1 AAATGTAATGTACAATGTACCCTGTCGATTTTATGGTTTG 6 6943798 0.970309138 4 6 40 1 0.903089987 0 0.166666667 0.375 6 0 0 8 2L:6943774-6943813 7 6.5 765 FBgn0031871 525 42.17 64.62333333 0.012380952 0.154138013 0.100582865 -6 -6 -6 0.1 dme-miR-277-3p 6mer3-8 TGCATT 2L 6943939 6943944 - 2L_6943939_6943944_- 0.999863676 0.999999998 0.999931837 9.64E-05 Fgop2 FBtr0079366|FBtr0332325 6943738|6943176 6944048|6944048 2L - 6943899 6943968 3'utr Fgop2 FlyBase G8332.1 CGCACGAAGAGGGCCCACATAACCTGCATTAGCTCTTAGCGATTGATAATCTCTAAGTAATTTATACATA 19 6943949 0.961067937 6 18 96 0.92 1.361727836 0.28 0.263157895 0.44 19 2 0 23 2L:6943899-6943968 6 Fgop2 FBtr0332325|FBtr0079366 6943176|6943738 6944048|6944048 TGCATT 6mer3-8 dme-miR-277-3p 2L - 6943911 6943963 3'utr Fgop2 FlyBase G6485.1 GAAGAGGGCCCACATAACCTGCATTAGCTCTTAGCGATTGATAATCTCTAAGT 13 6943940 0.974597509 3 12 79 0.882352941 1.176091259 0.176470588 0.230769231 0.411764706 13 2 0 15 2L:6943911-6943963 6 14.5 766 FBgn0031871 525 42.17 64.62333333 0.027619048 0.343846336 0.22437716 5 -4 0.5 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC 2L 6954425 6954431 - 2L_6954425_6954431_- 0.447769513 0.419889256 0.433829384 0.019714278 CG13775 FBtr0343775 6954355 6954584 2L - 6954402 6954442 3'utr CG13775 FlyBase G8347.1 ATCAGGATCATTGTGTTCCTCTTCGTCTTCCTCCTCCTCCT 10 6954432 0.79288534 2 10 100 1 1.113943352 0 0.2 0.384615385 10 0 0 13 2L:6954402-6954442 7 CG13775 FBtr0343775 6954355 6954584 TGTGTTC 7mer-m8 dme-miR-317-3p 2L - 6954402 6954442 3'utr CG13775 FlyBase G6497.1 ATCAGGATCATTGTGTTCCTCTTCGTCTTCCTCCTCCTCCT 9 6954432 0.799558189 3 9 101 1 1.079181246 0 0.333333333 0.5 9 0 0 12 2L:6954402-6954442 7 9.5 767 FBgn0031874 57.8 3.896666667 5.98 0.164359862 2.43798118 1.588628763 1 1 1 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA 2L 6954490 6954495 + 2L_6954490_6954495_+ 0.992601628 0.999903388 0.996252508 0.005163152 SA FBtr0079349 6954453 6954586 2L + 6954468 6954501 3'utr SA FlyBase G2658.1 ATCAGCCATACACGCGGCTTAAGTGCAAAATCTA 10 6954486 0.785031519 2 10 43 1 1.079181246 0 0.2 0.333333333 10 0 0 12 2L:6954468-6954501 6 SA FBtr0079349 6954453 6954586 GTGCAA 6mer3-8 dme-miR-92b-3p 2L + 6954463 6954500 3'utr SA FlyBase G2093.1 AGGCAATCAGCCATACACGCGGCTTAAGTGCAAAATCT 9 6954486 0.826077279 3 7 36 0.833333333 1 0 0.333333333 0.5 9 2 0 10 2L:6954463-6954500 6 8.5 768 FBgn0020616 1164.703333 38.63666667 59.09 0.007297996 0.219998275 0.143848367 4 4 4 0.1 dme-miR-31a-5p 6mer2-7 CTTGCC 2L 6959136 6959141 - 2L_6959136_6959141_- 0.999999865 0.999986447 0.999993156 9.55E-06 Atac1 FBtr0079362 6959097 6959182 2L - 6959117 6959164 3'utr Atac1 FlyBase G8351.1 TACTTGAGTACTAAATTACTAGACTTGCCTGTAAAGCTACAAATTAAA 30 6959145 0.761542278 10 27 207 0.916666667 1.217483944 0.166666667 0.2 0.333333333 30 2 1 33 2L:6959117-6959164 6 Atac1 FBtr0079362 6959097 6959182 CTTGCC 6mer2-7 dme-miR-31a-5p 2L - 6959107 6959159 3'utr Atac1 FlyBase G6500.1 GAGTACTAAATTACTAGACTTGCCTGTAAAGCTACAAATTAAATATAAAGAGA 15 6959146 0.824867079 4 12 99 0.842105263 0.903089987 0.263157895 0.2 0.368421053 15 2 1 16 2L:6959107-6959159 6 21 769 FBgn0031876 128 12.98 19.96333333 0.1640625 1.617873652 1.051928536 4 5 4.5 0.1 dme-miR-305-5p 7mer-m8 AGTACAA 2L 6966868 6966874 - 2L_6966868_6966874_- 0.64326758 0.643267576 0.643267578 0 smt3 FBtr0079356|FBtr0346716 6966778|6966778 6967027|6967027 2L - 6966844 6966944 3'utr smt3 FlyBase G8372.2 CAAAAACACAACAACAACAACATGAAGAATCCAACAAACCAGGCCCTAAGAATCGATTGAATATGCTTTTAGTACAACTGTAGATTCTAAATGCGTCTGTG 79 6966876 0.987768481 17 75 701 0.955555556 1.633468456 0.177777778 0.139240506 0.244444444 79 3 1 86 2L:6966844-6966944 7 smt3 FBtr0079356|FBtr0346716 6966778|6966778 6967027|6967027 AGTACAA 7mer-m8 dme-miR-305-5p 2L - 6966850 6966944 3'utr smt3 FlyBase G6514.2 CAAAAACACAACAACAACAACATGAAGAATCCAACAAACCAGGCCCTAAGAATCGATTGAATATGCTTTTAGTACAACTGTAGATTCTAAATGCG 50 6966876 0.984249376 13 47 386 0.948051948 1.86332286 0.337662338 0.34 0.571428571 50 4 0 73 2L:6966850-6966944 7 55 770 FBgn0264922 12150.86667 2306.473333 3557.52 0.004526426 0.023845929 0.015460208 2 2 2 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2L 7015018 7015023 - 2L_7015018_7015023_- 0.685343149 0.665597212 0.67547018 0.01396246 ade3 FBtr0339663|FBtr0079431 7014621|7014859 7015085|7015085 2L - 7014997 7015045 3'utr ade3 FlyBase G8383.1 AGGGATGAGTTTATCTTACTCGAAGACTTTTTGTCAAATTAGTTATAAT 30 7015016 0.986413618 5 29 266 0.975 1.290034611 0.025 0.2 0.4 30 0 1 39 2L:7014997-7015045 6 ade3 FBtr0339663|FBtr0079431 7014621|7014859 7015085|7015085 AAGACT 6mer3-8 dme-miR-14-3p 2L - 7015008 7015034 3'utr ade3 FlyBase G6521.1 TATCTTACTCGAAGACTTTTTGTCAAA 23 7015016 0.682794551 3 23 187 1 1.462397998 0.034482759 0.217391304 0.379310345 23 0 0 29 2L:7015008-7015034 6 26.5 771 FBgn0000053 589.7966667 27.05333333 41.45 0.044930739 0.979546575 0.639324487 -7 -7 -7 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 2L 7030904 7030909 - 2L_7030904_7030909_- 0.999997162 0.999997707 0.999997435 3.54E-07 Rab30 FBtr0079428|FBtr0079426|FBtr0079427 7030491|7030491|7030491 7031433|7031433|7031433 2L - 7030883 7030956 3'utr Rab30 FlyBase G8407.1 AGATCCTATGGGAAACTAGCTGTCAATGACTAAGGATGCTAAATATTTGTGTTACAAGAACTCCATTGGAGGTG 90 7030911 0.821874347 9 83 693 0.935185185 1.703291378 0.333333333 0.177777778 0.314814815 90 6 1 101 2L:7030883-7030956 6 Rab30 FBtr0079427|FBtr0079426|FBtr0079428 7030491|7030491|7030491 7031433|7031433|7031433 TGTGTT 6mer3-8 dme-miR-317-3p 2L - 7030823 7030956 3'utr Rab30 FlyBase G6535.2 AGATCCTATGGGAAACTAGCTGTCAATGACTAAGGATGCTAAATATTTGTGTTACAAGAACTCCATTGGAGGTGTTTAAGACCGCCTGATTTTCTTGATTTGTATTATATAGACGTATGTATTGATCTGATTAT 83 7030911 0.946101567 15 79 662 0.959677419 2.075546961 0.403225806 0.313253012 0.540322581 83 5 0 119 2L:7030823-7030956 6 67 772 FBgn0031882 194.3333333 12.53666667 18.90666667 0.344768439 5.344323318 3.543723554 2 2 2 0.1 dme-miR-980-3p 7mer-A1 GCAGCTA 2L 7031105 7031111 - 2L_7031105_7031111_- 0.823349107 0.823349498 0.823349302 2.83E-07 Rab30 FBtr0079428|FBtr0079426|FBtr0079427 7030491|7030491|7030491 7031433|7031433|7031433 2L - 7031079 7031152 3'utr Rab30 FlyBase G8408.2 AAACATTTAAAGTACAATGTGCAAACGGATCTGGAAACTGTGCAGCTAATCTGTTATCTGTTATCGTGATATTC 73 7031114 0.86851819 15 57 442 0.846153846 1.40936947 0.230769231 0.164383562 0.32967033 73 12 2 77 2L:7031079-7031152 7 Rab30 FBtr0079427|FBtr0079426|FBtr0079428 7030491|7030491|7030491 7031433|7031433|7031433 GCAGCTA 7mer-A1 dme-miR-980-3p 2L - 7031083 7031201 3'utr Rab30 FlyBase G6536.2 AAGGTATTTAGAGCAATTCTCTTCGCTTTCACTAAACTACGATAACAACAAACATTTAAAGTACAATGTGCAAACGGATCTGGAAACTGTGCAGCTAATCTGTTATCTGTTATCGTGAT 68 7031114 0.85457327 18 59 422 0.909090909 1.653212514 0.151515152 0.323529412 0.535353535 68 8 1 90 2L:7031083-7031201 7 40.5 773 FBgn0031882 194.3333333 12.53666667 18.90666667 0.208404803 3.230523797 2.142101551 3 3 3 0.1 dme-miR-283-5p 7mer-m8 TGATATT 2L 7031367 7031373 - 2L_7031367_7031373_- 0.62013956 0.620203674 0.620171617 4.53E-05 Rab30 FBtr0079428|FBtr0079426|FBtr0079427 7030491|7030491|7030491 7031433|7031433|7031433 2L - 7031326 7031486 stop_codon Rab30 FlyBase G8410.1 ATTGCTGTGGCGGACTCGCCAGCGGCGGCTCCAACTCTAGTCAAGGCGGCTGAGCAGCTGCAAACTGAACTGGAAGCTGAGCAGCTAATCTGTAACTTGTTAAGGACTAATCGTGATATTCCATTTATCTTTTATTACCACAATGCTCCCACATTCTAACA 131 7031377 0.96686346 20 125 697 0.951219512 1.716003344 0.158536585 0.183206107 0.347560976 131 6 2 156 2L:7031326-7031486 7 Rab30 FBtr0079427|FBtr0079426|FBtr0079428 7030491|7030491|7030491 7031433|7031433|7031433 TGATATT 7mer-m8 dme-miR-283-5p 2L - 7031349 7031507 stop_codon Rab30 FlyBase G6538.1 GTGCCAAGGCAGCGCAGAGCAATTGCTGTGGCGGACTCGCCAGCGGCGGCTCCAACTCTAGTCAAGGCGGCTGAGCAGCTGCAAACTGAACTGGAAGCTGAGCAGCTAATCTGTAACTTGTTAAGGACTAATCGTGATATTCCATTTATCTTTTATTAC 119 7031377 0.971845675 18 109 631 0.891752577 1.459894853 0.12371134 0.428571429 0.649484536 119 16 5 173 2L:7031349-7031507 7 58.5 774 FBgn0031882 194.3333333 12.53666667 18.90666667 0.30102916 4.666312151 3.094146685 4 4 4 0.1 dme-bantam-3p 6mer3-8 TGATCT 2L 7034833 7034838 + 2L_7034833_7034838_+ 1 1 1 0 Caper FBtr0344708|FBtr0344712|FBtr0344709|FBtr0344711 7034209|7034497|7034209|7034497 7037613|7037613|7037613|7037878 2L + 7034813 7034842 5'utr Caper FlyBase G2689.1 GCTAAACATTCCCCCAAAACTGATCTGATT 6 7034833 0.755958728 3 6 27 1 0.903089987 0.25 0.333333333 0.5 6 0 0 8 2L:7034813-7034842 6 Caper FBtr0344711|FBtr0344709|FBtr0344712|FBtr0344708 7034497|7034209|7034497|7034209 7037878|7037613|7037613|7037613 TGATCT 6mer3-8 dme-bantam-3p 2L + 7034810 7034849 5'utr Caper FlyBase G2118.1 AGCGCTAAACATTCCCCCAAAACTGATCTGATTGAGAATG 8 7034841 0.889066532 3 8 39 1 1.041392685 0.727272727 0.375 0.545454545 8 0 0 11 2L:7034810-7034849 6 6.5 775 FBgn0031883 799.28 33.26666667 50.99666667 0.008132319 0.195390782 0.127459311 0 -8 -4 0.1 dme-miR-11-3p 7mer-m1 TGTGATG 2L 7054713 7054719 + 2L_7054713_7054719_+ 0.610813254 0.611874122 0.611343688 0.000750099 milt FBtr0306230|FBtr0306228|FBtr0306231|FBtr0306232|FBtr0306233|FBtr0306229 7054555|7054555|7054555|7054555|7054555|7054555 7054847|7054847|7056010|7054847|7056010|7056010 2L + 7054673 7054729 5'utr milt FlyBase G2717.1 TACGCGAGAACAAGTTGAATAACGAAACGTAATGTAATCGTGTGATGAACGTTTAGT 14 7054688 0.968250832 9 13 69 0.933333333 1.146128036 0.2 0.071428571 0.133333333 14 1 0 14 2L:7054673-7054729 7 milt FBtr0306233|FBtr0306229|FBtr0306230|FBtr0306228|FBtr0306231|FBtr0306232 7054555|7054555|7054555|7054555|7054555|7054555 7056010|7056010|7054847|7054847|7056010|7054847 TGTGATG 7mer-m1 dme-miR-11-3p 2L + 7054668 7054738 5'utr milt FlyBase G2144.1 AGCACTACGCGAGAACAAGTTGAATAACGAAACGTAATGTAATCGTGTGATGAACGTTTAGTTTAATTTTT 14 7054688 0.967299234 9 14 77 1 1.431363764 0.333333333 0.5 0.740740741 14 0 0 27 2L:7054668-7054738 7 8.5 776 FBgn0262872 1801.88 44.2 67.81666667 0.004717295 0.192307692 0.125337921 25 25 25 0.1 dme-miR-1008-3p 8mer-A1 AGCTGTGA 2L 7054811 7054818 + 2L_7054811_7054818_+ 0.468689851 0.504087856 0.486388854 0.025030166 milt FBtr0306230|FBtr0306228|FBtr0306231|FBtr0306232|FBtr0306233|FBtr0306229 7054555|7054555|7054555|7054555|7054555|7054555 7054847|7054847|7056010|7054847|7056010|7056010 2L + 7054738 7054884 5'utr-coding milt FlyBase G2718.1 TCTGTTTAATACCCCGCATAATGCCTGTCATCGCCACCTTAAGCAACACTGGAAAGAAGGTTTTAGTGTTTGTAGCTGTGATTTGTAAATACATATATAGAGAAATGTTTAAATTTAGTAGTTATTAATCGAGTACTTCGCATATTA 603 7054820 0.84434385 30 565 5992 0.936528497 1.95604831 0.325129534 0.225538972 0.39507772 603 42 7 723 2L:7054738-7054884 8 milt FBtr0306233|FBtr0306229|FBtr0306230|FBtr0306228|FBtr0306231|FBtr0306232 7054555|7054555|7054555|7054555|7054555|7054555 7056010|7056010|7054847|7054847|7056010|7054847 AGCTGTGA 8mer-A1 dme-miR-1008-3p 2L + 7054741 7054867 5'utr-coding milt FlyBase G2145.1 GTTTAATACCCCGCATAATGCCTGTCATCGCCACCTTAAGCAACACTGGAAAGAAGGTTTTAGTGTTTGTAGCTGTGATTTGTAAATACATATATAGAGAAATGTTTAAATTTAGTAGTTATTAATC 451 7054820 0.872320436 28 417 4539 0.935714286 1.774848615 0.312857143 0.399113082 0.612857143 451 35 10 655 2L:7054741-7054867 8 456 777 FBgn0262872 1801.88 44.2 67.81666667 0.253069017 10.31674208 6.724010813 -9 -9 -9 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 2L 7055019 7055024 + 2L_7055019_7055024_+ 0.923429721 0.996890254 0.960159987 0.051944488 milt FBtr0306231|FBtr0306233|FBtr0306229 7054555|7054555|7054555 7056010|7056010|7056010 2L + 7054991 7055031 3'utr milt FlyBase G2721.1 ATTTTGCCAATTTTGTATTTATTTTCCCTGTGTTTATTACC 19 7055003 0.763425606 9 19 248 1 1.322219295 0.047619048 0.105263158 0.19047619 19 0 0 21 2L:7054991-7055031 6 milt FBtr0306233|FBtr0306229|FBtr0306231 7054555|7054555|7054555 7056010|7056010|7056010 TGTGTT 6mer3-8 dme-miR-317-3p 2L + 7054946 7055030 3'utr milt FlyBase G2146.1 ATAGAGAAACCGAGTTCCAAAGCAGCTATTTTTAATTTAAACTACATTTTGCCAATTTTGTATTTATTTTCCCTGTGTTTATTAC 22 7055002 0.990666913 13 21 229 0.926829268 1.579783597 0.024390244 0.727272727 0.853658537 22 3 0 38 2L:7054946-7055030 6 7 778 FBgn0262872 1801.88 44.2 67.81666667 0.003884831 0.158371041 0.103219464 16 17 16.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2L 7055393 7055399 + 2L_7055393_7055399_+ 0.661615504 0.661615511 0.661615507 0 milt FBtr0306231|FBtr0306233|FBtr0306229 7054555|7054555|7054555 7056010|7056010|7056010 2L + 7055363 7055433 3'utr milt FlyBase G2724.1 ACATAAATTATAGCGAAAAACGATTATTTTTCTAGTCCTACACTGGGTGGGTGCTCGTTTGGCTATGCAGA 73 7055392 0.848475309 11 70 658 0.964285714 1.908485019 0.095238095 0.095890411 0.214285714 73 3 0 81 2L:7055363-7055433 7 milt FBtr0306233|FBtr0306229|FBtr0306231 7054555|7054555|7054555 7056010|7056010|7056010 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2L + 7055372 7055428 3'utr milt FlyBase G2149.1 ATAGCGAAAAACGATTATTTTTCTAGTCCTACACTGGGTGGGTGCTCGTTTGGCTAT 38 7055392 0.609120628 6 37 350 0.962264151 1.707570176 0.056603774 0.342105263 0.528301887 38 2 0 51 2L:7055372-7055428 7 49.5 779 FBgn0262872 1801.88 44.2 67.81666667 0.027471308 1.119909502 0.729909069 1 1 1 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 2L 7062286 7062291 + 2L_7062286_7062291_+ 1 0.999999998 0.999999999 0 Mnn1 FBtr0079401|FBtr0110978 7061720|7061720 7062665|7063586 2L + 7062227 7062303 3'utr Mnn1 FlyBase G2734.1 ATTTATGATGTATTTTTAGCTGTTATACTTTATCCCCTATGTATTTATTGCTACAACTATGTGTTTTCCCCTCAAGC 16 7062287 0.987224303 7 16 142 1 1.278753601 0.157894737 0.125 0.263157895 16 0 0 19 2L:7062227-7062303 6 Mnn1 FBtr0079401|FBtr0110978 7061720|7061720 7062665|7063586 TGTGTT 6mer3-8 dme-miR-317-3p 2L + 7062259 7062300 3'utr Mnn1 FlyBase G2158.1 TCCCCTATGTATTTATTGCTACAACTATGTGTTTTCCCCTCA 8 7062292 0.982090946 4 8 60 1 1.176091259 0 0.5 0.733333333 8 0 0 15 2L:7062259-7062300 6 10 780 FBgn0031885 716.3333333 17.91333333 27.53333333 0.013959981 0.558243394 0.363196126 -1 -6 -3.5 0.1 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 2L 7062349 7062355 + 2L_7062349_7062355_+ 0.620202493 0.620203688 0.620203091 8.49E-07 Mnn1 FBtr0079401|FBtr0110978 7061720|7061720 7062665|7063586 2L + 7062323 7062425 3'utr Mnn1 FlyBase G2735.1 TTTATTGTGTTTAAGCGTAACTTAATTGGTGCTTTTCTTCGAAAACGAATGAGAAATATAGGTTCTGTGTTTGATTTGATCACACCTTGAGGCAAAAATCTTG 157 7062348 0.85260619 15 153 1482 0.967567568 1.951823035 0.07027027 0.133757962 0.264864865 157 5 1 179 2L:7062323-7062425 7 Mnn1 FBtr0079401|FBtr0110978 7061720|7061720 7062665|7063586 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 2L + 7062325 7062425 3'utr Mnn1 FlyBase G2159.1 TATTGTGTTTAAGCGTAACTTAATTGGTGCTTTTCTTCGAAAACGAATGAGAAATATAGGTTCTGTGTTTGATTTGATCACACCTTGAGGCAAAAATCTTG 113 7062348 0.903132634 10 108 1064 0.970930233 1.921686475 0.063953488 0.336283186 0.563953488 113 4 1 167 2L:7062325-7062425 7 114 781 FBgn0031885 716.3333333 17.91333333 27.53333333 0.159143788 6.363974693 4.140435835 1 1 1 0.1 dme-miR-282-5p 7mer-A1 GAGGCTA 2L 7062515 7062521 + 2L_7062515_7062521_+ 0.823344625 0.823346017 0.823345321 9.90E-07 Mnn1 FBtr0079401|FBtr0110978 7061720|7061720 7062665|7063586 2L + 7062437 7062559 3'utr Mnn1 FlyBase G2736.1 TTGAACAATAACCGAATTGAAGTCCAAATGGATAGACGGACTGCTCGTATTTATGTATTTACTTTAAAGCATTTTATTGAGGCTAAGCTGATTAATTTAACTCTATTTACATATATATCCTCT 239 7062513 0.985110033 18 235 1917 0.989619377 2.456366033 0.429065744 0.179916318 0.321799308 239 3 0 286 2L:7062437-7062559 7 Mnn1 FBtr0079401|FBtr0110978 7061720|7061720 7062665|7063586 GAGGCTA 7mer-A1 dme-miR-282-5p 2L + 7062493 7062541 3'utr Mnn1 FlyBase G2160.2 ATTTACTTTAAAGCATTTTATTGAGGCTAAGCTGATTAATTTAACTCTA 138 7062513 0.746333047 9 133 1089 0.969387755 2.278753601 0.459183673 0.333333333 0.530612245 138 6 0 190 2L:7062493-7062541 7 179 782 FBgn0031885 716.3333333 17.91333333 27.53333333 0.249883667 9.992556755 6.501210654 2 2 2 0.1 dme-miR-11-3p 8mer-m1 CTGTGATG 2L 7062969 7062976 + 2L_7062969_7062976_+ 0.452652752 0.454078942 0.453365847 0.001008405 Mnn1 FBtr0110978 7061720 7063586 2L + 7062950 7062983 3'utr Mnn1 FlyBase G2738.1 TGATTTGTGCGTAGAGCATCTGTGATGAATAATA 26 7062968 0.81241145 2 23 151 0.90625 1.462397998 0 0.192307692 0.34375 26 3 0 29 2L:7062950-7062983 8 Mnn1 FBtr0110978 7061720 7063586 CTGTGATG 8mer-m1 dme-miR-11-3p 2L + 7062946 7062995 3'utr Mnn1 FlyBase G2163.1 AATTTGATTTGTGCGTAGAGCATCTGTGATGAATAATAATGTTTAAAAAA 35 7062968 0.952450363 4 33 211 0.959183673 1.672097858 0 0.314285714 0.510204082 35 2 0 47 2L:7062946-7062995 8 30.5 783 FBgn0031885 716.3333333 17.91333333 27.53333333 0.042577943 1.702642352 1.107748184 1 1 1 0.1 dme-miR-318-3p 7mer-A1 CCAGTGA 2L 7069854 7069860 - 2L_7069854_7069860_- 0.823349553 0.823349548 0.823349551 7.07E-08 Pvf2 FBtr0079423 7069534 7070160 2L - 7069819 7069887 3'utr Pvf2 FlyBase G8420.1 AATCTTAATTAAGCTGAGTTTAAGATGCCAGTGAAACTAGATAAAATCAGACATTGAGAACTGAAAGTA 23 7069833 0.946241372 6 23 99 1 1.414973348 0.192307692 0.086956522 0.192307692 23 0 0 26 2L:7069819-7069887 7 Pvf2 FBtr0079423 7069534 7070160 CCAGTGA 7mer-A1 dme-miR-318-3p 2L - 7069817 7069877 3'utr Pvf2 FlyBase G6545.1 AAGCTGAGTTTAAGATGCCAGTGAAACTAGATAAAATCAGACATTGAGAACTGAAAGTATT 13 7069833 0.737697084 5 13 55 1 1.301029996 0.15 0.230769231 0.5 13 0 0 20 2L:7069817-7069877 7 8 784 FBgn0031888 877.1766667 51.15666667 78.84 0.00912017 0.156382355 0.101471334 -27 -27 -27 0.1 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 7099159 7099166 - 2L_7099159_7099166_- 0.63113661 0.631136615 0.631136612 0 Pvf3 FBtr0112612|FBtr0342658 7098186|7098186 7100092|7100092 2L - 7099152 7099189 3'utr Pvf3 FlyBase G8436.1 AAATTAAATTTTCATATTTAATTTCTAGTCAAATTTTC 68 7099167 0.743921356 4 67 723 0.988372093 1.929418926 0 0.235294118 0.395348837 68 1 0 85 2L:7099152-7099189 8 Pvf3 FBtr0112612|FBtr0342658 7098186|7098186 7100092|7100092 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 7099151 7099178 3'utr Pvf3 FlyBase G6556.1 TCATATTTAATTTCTAGTCAAATTTTCA 32 7099167 0.738120811 2 32 330 1 1.544068044 0 0.09375 0.171428571 32 0 0 35 2L:7099151-7099178 8 49.5 785 FBgn0085407 30.66666667 0.876666667 1.326666667 1.614130435 56.46387833 37.31155779 1 1 1 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 2L 7099396 7099401 - 2L_7099396_7099401_- 0.999995331 0.999999895 0.999997613 3.25E-06 Pvf3 FBtr0112612|FBtr0342658 7098186|7098186 7100092|7100092 2L - 7099375 7099435 3'utr Pvf3 FlyBase G8438.1 ATGCGTATGCTAAATGAAATTCCAAATATATAAATTGACTGCGTTTTTAGTTTTAATTGAC 29 7099401 0.893762097 12 28 353 0.96875 1.491361694 0.09375 0.103448276 0.1875 29 1 0 31 2L:7099375-7099435 6 Pvf3 FBtr0112612|FBtr0342658 7098186|7098186 7100092|7100092 TTGACT 6mer3-8 dme-miR-1012-3p 2L - 7099376 7099428 3'utr Pvf3 FlyBase G6558.1 TGCTAAATGAAATTCCAAATATATAAATTGACTGCGTTTTTAGTTTTAATTGA 14 7099401 0.994798206 9 11 153 0.869565217 1.301029996 0 0.428571429 0.652173913 14 3 0 20 2L:7099376-7099428 6 18 786 FBgn0085407 30.66666667 0.876666667 1.326666667 0.586956522 20.53231939 13.5678392 0 0 0 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2L 7099561 7099566 - 2L_7099561_7099566_- 0.999999999 0.999999959 0.999999979 0 Pvf3 FBtr0112612|FBtr0342658 7098186|7098186 7100092|7100092 2L - 7099549 7099594 3'utr Pvf3 FlyBase G8439.1 AAAAATCTGTATCTTAGCAAATGGAAATAAGACTTTTTTGCGCATG 62 7099559 0.755324505 6 61 536 0.960526316 1.86332286 0.026315789 0.161290323 0.315789474 62 3 0 73 2L:7099549-7099594 6 Pvf3 FBtr0112612|FBtr0342658 7098186|7098186 7100092|7100092 AAGACT 6mer3-8 dme-miR-14-3p 2L - 7099552 7099590 3'utr Pvf3 FlyBase G6559.1 ATCTGTATCTTAGCAAATGGAAATAAGACTTTTTTGCGC 28 7099559 0.69526919 4 23 213 0.904761905 1.579783597 0.047619048 0.321428571 0.547619048 28 4 0 38 2L:7099552-7099590 6 44.5 787 FBgn0085407 30.66666667 0.876666667 1.326666667 1.451086957 50.76045627 33.54271357 -7 -7 -7 0.1 dme-miR-305-5p 7mer-m8 AGTACAA 2L 71085 71091 + 2L_71085_71091_+ 0.643266331 0.429772728 0.536519529 0.150962772 dbr FBtr0306539|FBtr0306537|FBtr0078100 70894|70894|70894 71390|71390|71390 2L + 71074 71112 3'utr dbr FlyBase G402.1 AAGTCAAGAATAGTACAACTATTTAAAGAATAACACGAT 11 71084 0.889820457 2 11 67 1 1.079181246 0 0.090909091 0.166666667 11 0 0 12 2L:71074-71112 7 dbr FBtr0306539|FBtr0306537|FBtr0078100 70894|70894|70894 71390|71390|71390 AGTACAA 7mer-m8 dme-miR-305-5p 2L + 71036 71102 3'utr dbr FlyBase G338.1 TTTATTAAAAGCAATGGCTGGAGTCTACACACGAAAATAAGTCAAGAATAGTACAACTATTTAAAGA 22 71084 0.806308425 7 21 94 0.939393939 1.491361694 0.090909091 0.409090909 0.606060606 22 2 0 31 2L:71036-71102 7 9 788 FBgn0067779 850.6933333 26.96666667 41.62666667 0.010579606 0.333745365 0.216207559 1 1 1 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 71200 71205 + 2L_71200_71205_+ 0.999908774 0.999761082 0.999834928 0.00010444 dbr FBtr0306539|FBtr0306537|FBtr0078100 70894|70894|70894 71390|71390|71390 2L + 71144 71267 3'utr dbr FlyBase G403.1 TCGATTAATTATTCAGCGCTTAAGTTTTCTTTTGGGTTAAGTTTTGAACATATAATGTACCTTCTGGTGTATGTTAACATAAAATCCAGAATATGCCTTTAGACAGCAGAACGGAAGATATTTA 38 71199 0.987040899 10 35 308 0.918367347 1.352182518 0.469387755 0.210526316 0.387755102 38 3 1 45 2L:71144-71267 6 dbr FBtr0306539|FBtr0306537|FBtr0078100 70894|70894|70894 71390|71390|71390 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 71177 71217 3'utr dbr FlyBase G339.1 GGGTTAAGTTTTGAACATATAATGTACCTTCTGGTGTATGT 25 71199 0.804881606 3 25 214 1 1.591064607 0.179487179 0.4 0.615384615 25 0 0 39 2L:71177-71217 6 27 789 FBgn0067779 850.6933333 26.96666667 41.62666667 0.031738817 1.001236094 0.648622678 1 1 1 0.1 dme-miR-965-3p 7mer-m8 TACGCTT 2L 7185357 7185363 + 2L_7185357_7185363_+ 0.392532185 0.464496233 0.428514209 0.050886232 CG4495 FBtr0079405|FBtr0113028 7185291|7185291 7185519|7185529 2L + 7185317 7185388 3'utr CG4495 FlyBase G2745.1 CGCTTCAAGCGCCCCAATCTTAGTCACTTTTTCCTACGCTTACGCTTTTTACTATTTATTTTTGTAGTTAAC 34 7185355 0.991689567 8 33 357 1 1.633468456 0.023255814 0.264705882 0.418604651 34 0 0 43 2L:7185317-7185388 7 CG4495 FBtr0079405|FBtr0113028 7185291|7185291 7185519|7185529 TACGCTT 7mer-m8 dme-miR-965-3p 2L + 7185306 7185371 3'utr CG4495 FlyBase G2169.1 GTGGATTCTCCCGCTTCAAGCGCCCCAATCTTAGTCACTTTTTCCTACGCTTACGCTTTTTACTAT 21 7185356 0.912091063 9 20 199 0.967741935 1.477121255 0 0.380952381 0.580645161 21 1 0 30 2L:7185306-7185371 7 23.5 790 FBgn0031893 272.69 17.27 26.35 0.086178444 1.36074117 0.891840607 2 1 1.5 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 2L 7190783 7190788 - 2L_7190783_7190788_- 0.999999996 0.999999187 0.999999592 5.66E-07 CG4497 FBtr0079418|FBtr0302948 7190429|7190429 7191401|7191401 2L - 7190748 7190814 3'utr CG4497 FlyBase G8445.1 TAGCCAGAGTTTATTGCCTCGATCTTTGTGTTATAGAATGTTTTCCCATTTCCAATGTTTCGGTTAA 15 7190790 0.986409356 6 15 131 1 1.230448921 0.058823529 0.133333333 0.235294118 15 0 0 17 2L:7190748-7190814 6 CG4497 FBtr0079418|FBtr0302948 7190429|7190429 7191401|7191401 TGTGTT 6mer3-8 dme-miR-317-3p 2L - 7190773 7190809 3'utr CG4497 FlyBase G6562.1 AGAGTTTATTGCCTCGATCTTTGTGTTATAGAATGTT 10 7190789 0.694115088 5 10 98 1 1.204119983 0 0.6 0.75 10 0 0 16 2L:7190773-7190809 6 9 791 FBgn0031895 127.87 6.053333333 9.286666667 0.070383984 1.486784141 0.969131371 2 1 1.5 0.1 dme-miR-283-5p 6mer3-8 TGATAT 2L 7195075 7195080 - 2L_7195075_7195080_- 0.997027961 0.999135619 0.99808179 0.001490298 CG4502 FBtr0079416|FBtr0079417 7194906|7194906 7195555|7195555 2L - 7194956 7195112 3'utr CG4502 FlyBase G8450.1 AAGTTATATAAGATTTACAGAATCAATTAGTCTGATATCTTGGTTCGACTGTGTTATAATTTGTTGTGATTTTTGTTGAACTTAAACAAACCGTGAATAAACCAAATTACAACATCAGCTTGTAAACATAAGTGTGTTCCTCGAACTTCGCACTTTC 114 7195086 0.978657045 26 110 1054 0.962962963 2.113943352 0.125925926 0.157894737 0.288888889 114 5 0 130 2L:7194956-7195112 6 CG4502 FBtr0079416|FBtr0079417 7194906|7194906 7195555|7195555 TGATAT 6mer3-8 dme-miR-283-5p 2L - 7194997 7195110 3'utr CG4502 FlyBase G6565.1 GTTATATAAGATTTACAGAATCAATTAGTCTGATATCTTGGTTCGACTGTGTTATAATTTGTTGTGATTTTTGTTGAACTTAAACAAACCGTGAATAAACCAAATTACAACATC 77 7195086 0.910032319 16 75 644 0.981818182 1.73239376 0.1 0.337662338 0.536363636 77 1 1 108 2L:7194997-7195110 6 63.5 792 FBgn0031896 751.2833333 44.36333333 68.21333333 0.08452204 1.431362236 0.930903049 6 6 6 0.1 dme-miR-8-3p 7mer-A1 AGTATTA 2L 7195195 7195201 - 2L_7195195_7195201_- 0.813223236 0.823346025 0.818284631 0.007157901 CG4502 FBtr0079416|FBtr0079417 7194906|7194906 7195555|7195555 2L - 7195175 7195214 3'utr CG4502 FlyBase G8451.1 AAATGGATATTTAAGTATTATTAGTTAAACAGGAACAAAA 11 7195205 0.992192846 5 9 109 0.846153846 1.041392685 0.307692308 0.181818182 0.307692308 11 2 0 11 2L:7195175-7195214 7 CG4502 FBtr0079416|FBtr0079417 7194906|7194906 7195555|7195555 AGTATTA 7mer-A1 dme-miR-8-3p 2L - 7195176 7195236 3'utr CG4502 FlyBase G6566.1 ATAGGAAGTTTCGCCGAATACAAAATGGATATTTAAGTATTATTAGTTAAACAGGAACAAA 11 7195204 0.992249327 5 8 83 0.769230769 0.698970004 0.230769231 0.181818182 0.307692308 11 2 1 10 2L:7195176-7195236 7 10 793 FBgn0031896 751.2833333 44.36333333 68.21333333 0.013310557 0.225411376 0.146598905 4 3 3.5 0.1 dme-miR-33-5p 8mer-A1 CAATGCAA 2L 7195488 7195495 - 2L_7195488_7195495_- 0.580299251 0.501623571 0.540961411 0.055632121 CG4502 FBtr0079416|FBtr0079417 7194906|7194906 7195555|7195555 2L - 7195480 7195535 3'utr CG4502 FlyBase G8453.1 AGGAAACTCAGCTCAGATGCTCTGCGTTTGCCAACACAACCAATGCAATTTAATAA 16 7195518 0.774238376 7 14 78 0.904761905 0.977723605 0.047619048 0.3125 0.476190476 16 1 1 19 2L:7195480-7195535 8 CG4502 FBtr0079416|FBtr0079417 7194906|7194906 7195555|7195555 CAATGCAA 8mer-A1 dme-miR-33-5p 2L - 7195442 7195548 3'utr CG4502 FlyBase G6567.2 ATTCCGGACCGCAAGGAAACTCAGCTCAGATGCTCTGCGTTTGCCAACACAACCAATGCAATTTAATAATCAGCCACCCAGCCAAGTTCGCTCATAGTAATACATCA 23 7195518 0.971582171 8 21 121 0.95 1.579783597 0.1 0.434782609 0.675 23 2 0 38 2L:7195442-7195548 8 6 794 FBgn0031896 751.2833333 44.36333333 68.21333333 0.007986334 0.135246825 0.087959343 23 23 23 0.1 dme-miR-283-5p 7mer-A1 GATATTA 2L 7205346 7205352 - 2L_7205346_7205352_- 0.782911246 0.778853543 0.780882394 0.002869227 CG13784 FBtr0110799|FBtr0330197|FBtr0330199|FBtr0330198 7205251|7204536|7205251|7205251 7208015|7208015|7206347|7206347 2L - 7205337 7205411 3'utr CG13784 FlyBase G8457.1 ATTTTGTAGCCCTGTAAGTTCAATTTGTATTAAAATCAACAAAATCAAACTTTAATCTCGATATTATTCTTTAAA 31 7205360 0.71730796 9 28 251 0.894736842 0.929418926 0.078947368 0.225806452 0.368421053 31 1 3 34 2L:7205337-7205411 7 CG13784 FBtr0330198|FBtr0330199|FBtr0330197|FBtr0110799 7205251|7205251|7204536|7205251 7206347|7206347|7208015|7208015 GATATTA 7mer-A1 dme-miR-283-5p 2L - 7205340 7205407 3'utr CG13784 FlyBase G6572.1 TGTAGCCCTGTAAGTTCAATTTGTATTAAAATCAACAAAATCAAACTTTAATCTCGATATTATTCTTT 18 7205360 0.734807248 6 18 150 1 1.431363764 0.074074074 0.277777778 0.518518519 18 0 0 27 2L:7205340-7205407 7 17 795 FBgn0031897 1244.07 88.35 137.0766667 0.013664826 0.192416525 0.124018189 8 8 8 0.1 dme-miR-1003-3p 8mer-A1 ATGTGAGA 2L 7205677 7205684 - 2L_7205677_7205684_- 0.598165457 0.614747755 0.606456606 0.011725457 CG13784 FBtr0110799|FBtr0330197|FBtr0330199|FBtr0330198 7205251|7204536|7205251|7205251 7208015|7208015|7206347|7206347 2L - 7205634 7205714 3'utr CG13784 FlyBase G8460.1 AGAACATAAAACCAATGTACATTACTTCTTATGTGAGATGCAGCTACAAAAATTAGCTTACAATGTAAACTAGTTTTAAAC 95 7205677 0.828359519 13 90 691 0.946428571 1.72427587 0.017857143 0.147368421 0.276785714 95 5 1 106 2L:7205634-7205714 8 CG13784 FBtr0330198|FBtr0330199|FBtr0330197|FBtr0110799 7205251|7205251|7204536|7205251 7206347|7206347|7208015|7208015 ATGTGAGA 8mer-A1 dme-miR-1003-3p 2L - 7205582 7205717 3'utr CG13784 FlyBase G6573.1 ACTAGAACATAAAACCAATGTACATTACTTCTTATGTGAGATGCAGCTACAAAAATTAGCTTACAATGTAAACTAGTTTTAAACATTTAGTTTCGGACAATGTGAATTTAAAGAAAAGGGTTTCAGCTGGGGAAGG 77 7205677 0.984363879 17 71 562 0.924369748 1.740362689 0.12605042 0.38961039 0.605042017 77 8 1 110 2L:7205582-7205717 8 66 796 FBgn0031897 1244.07 88.35 137.0766667 0.053051677 0.747028862 0.481482382 -7 -7 -7 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 7220413 7220420 - 2L_7220413_7220420_- 0.64982406 0.643595235 0.646709648 0.004404497 ico FBtr0079413|FBtr0079413|FBtr0079413 7220367|7220367|7220367 7220532|7220532|7220532 2L - 7220382 7220440 3'utr ico FlyBase G8472.1 ACAACAATTTTCAGTTTTCACTGTGATAAATGCGAAGTGTACAGTTATTTGTATAATAA 23 7220425 0.987635954 8 20 183 0.870967742 1.431363764 0.096774194 0.304347826 0.483870968 23 4 0 27 2L:7220382-7220440 8 ico FBtr0079413|FBtr0079413|FBtr0079413 7220367|7220367|7220367 7220532|7220532|7220532 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 7220401 7220429 3'utr ico FlyBase G6584.1 CAGTTTTCACTGTGATAAATGCGAAGTGT 14 7220424 0.834684988 4 10 106 0.823529412 1.146128036 0 0.214285714 0.352941176 14 3 0 14 2L:7220401-7220429 8 18.5 797 FBgn0263133 394.38 19.21 29.5 0.046909072 0.963040083 0.627118644 5 4 4.5 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 2L 7226705 7226711 - 2L_7226705_7226711_- 0.620204266 0.620203397 0.620203832 6.36E-07 Ndae1 FBtr0331659|FBtr0331662|FBtr0299538|FBtr0331661|FBtr0331663|FBtr0331660|FBtr0299537 7226136|7226136|7226460|7226460|7226460|7226460|7226460 7226914|7226914|7226914|7226914|7226914|7226914|7226914 2L - 7226681 7226758 3'utr Ndae1 FlyBase G8477.1 ACAAAACCAACGATAAACTCAATTATTTATAGATTTTTTTAATAATTTGCATTTTGTCGGCCTTGATACATTTTATTG 12 7226695 0.987914998 5 11 113 0.916666667 1.041392685 0 0 0 12 1 0 11 2L:7226681-7226758 7 Ndae1 FBtr0299537|FBtr0331660|FBtr0331663|FBtr0331661|FBtr0299538|FBtr0331662|FBtr0331659 7226460|7226460|7226460|7226460|7226460|7226136|7226136 7226914|7226914|7226914|7226914|7226914|7226914|7226914 TGCATTT 7mer-m8 dme-miR-277-3p 2L - 7226673 7226759 3'utr Ndae1 FlyBase G6588.1 CACAAAACCAACGATAAACTCAATTATTTATAGATTTTTTTAATAATTTGCATTTTGTCGGCCTTGATACATTTTATTGAACTAGTT 8 7226712 0.989669798 6 8 78 1 1.041392685 0 0.25 0.454545455 8 0 0 11 2L:7226673-7226759 7 6.5 798 FBgn0259111 820.0933333 22.69 34.66 0.007925927 0.28646981 0.187536065 -16 1 -7.5 0.1 dme-miR-8-3p 6mer2-7 AGTATT 2L 7384631 7384636 - 2L_7384631_7384636_- 0.992040442 0.943922864 0.967981653 0.034024211 CG5149 FBtr0079469 7384484 7384886 2L - 7384597 7384674 3'utr CG5149 FlyBase G8484.1 ATACAATGTATAATGGATATAGTTTATGAAATACTGAGAGTATTGTTGTTGCGTTTTAGATCTTAAAGTGAGAAAAGT 10 7384664 0.776102219 8 10 83 1 1.041392685 0.363636364 0.1 0.181818182 10 0 0 11 2L:7384597-7384674 6 CG5149 FBtr0079469 7384484 7384886 AGTATT 6mer2-7 dme-miR-8-3p 2L - 7384603 7384670 3'utr CG5149 FlyBase G6591.1 AATGTATAATGGATATAGTTTATGAAATACTGAGAGTATTGTTGTTGCGTTTTAGATCTTAAAGTGAG 5 7384640 0.972724857 5 5 44 1 0.698970004 0.2 0 0 5 0 0 5 2L:7384603-7384670 6 2.5 799 FBgn0031904 297.6666667 19.02666667 29.12333333 0.008398656 0.131394534 0.085841822 28 4 16 0.1 dme-miR-1003-3p 7mer-A1 TGTGAGA 2L 7384830 7384836 - 2L_7384830_7384836_- 0.804677938 0.822316774 0.813497356 0.012472586 CG5149 FBtr0079469 7384484 7384886 2L - 7384781 7384859 3'utr CG5149 FlyBase G8486.1 GTTTTGTTTTATCATCGAGAATTTGTGAGACCATGCCCGATATGGGTGTGCAGTTAATGATTCAATTCAGTTTCCTTAG 20 7384837 0.979498461 5 20 144 1 1.361727836 0.304347826 0.15 0.260869565 20 0 0 23 2L:7384781-7384859 7 CG5149 FBtr0079469 7384484 7384886 TGTGAGA 7mer-A1 dme-miR-1003-3p 2L - 7384818 7384860 3'utr CG5149 FlyBase G6592.1 AGTTTTGTTTTATCATCGAGAATTTGTGAGACCATGCCCGATA 14 7384838 0.93459576 3 14 76 1 1.255272505 0.166666667 0.214285714 0.388888889 14 0 0 18 2L:7384818-7384860 7 15.5 800 FBgn0031904 297.6666667 19.02666667 29.12333333 0.052071669 0.814646111 0.532219297 1 2 1.5 0.1 dme-miR-79-3p 6mer3-8 TAGCTT 2L 7430619 7430624 - 2L_7430619_7430624_- 0.999855292 0.912638105 0.956246698 0.061671874 CG5958 FBtr0079466 7430528 7430672 2L - 7430548 7430650 3'utr CG5958 FlyBase G8499.1 CTGACATTCGCATCCTACATTGACATTAGCTTAACTTTATGCTTGTAAATACTTTCAATATGTGTTTGCTTAGTTCGTAACATTTTGGCAATAAACTAGTTAC 47 7430631 0.987959369 20 47 429 1 1.792391689 0.129032258 0.234042553 0.419354839 47 0 0 62 2L:7430548-7430650 6 CG5958 FBtr0079466 7430528 7430672 TAGCTT 6mer3-8 dme-miR-79-3p 2L - 7430547 7430649 3'utr CG5958 FlyBase G6600.1 TGACATTCGCATCCTACATTGACATTAGCTTAACTTTATGCTTGTAAATACTTTCAATATGTGTTTGCTTAGTTCGTAACATTTTGGCAATAAACTAGTTACA 22 7430631 0.988092646 12 21 189 0.970588235 1.51851394 0.294117647 0.363636364 0.588235294 22 1 0 33 2L:7430547-7430649 6 22.5 801 FBgn0031913 754 78.02 117.9766667 0.029840849 0.288387593 0.190715678 7 7 7 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2L 7472557 7472562 - 2L_7472557_7472562_- 0.99903998 0.614748624 0.806894302 0.271735055 Ziz FBtr0330722|FBtr0330726|FBtr0330724|FBtr0332201|FBtr0330721|FBtr0330728|FBtr0330723|FBtr0330725|FBtr0330727 7472511|7472511|7472511|7472511|7472511|7472511|7472511|7472511|7472511 7473645|7473645|7473645|7473110|7473645|7473645|7473645|7473645|7473645 2L - 7472520 7472600 3'utr Ziz FlyBase G8508.1 TAACAGATCTACGGATATATATTTACATACATGCATTTTCTAGTGAAATCGTATAATGAACTAAATACAAATATACGCATT 71 7472563 0.987798644 10 70 629 0.988636364 1.638489257 0.011363636 0.211267606 0.363636364 71 0 1 87 2L:7472520-7472600 6 Ziz FBtr0330725|FBtr0330727|FBtr0330728|FBtr0330723|FBtr0332201|FBtr0330721|FBtr0330722|FBtr0330726|FBtr0330724 7472511|7472511|7472511|7472511|7472511|7472511|7472511|7472511|7472511 7473645|7473645|7473645|7473645|7473110|7473645|7473645|7473645|7473645 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2L - 7472539 7472680 3'utr Ziz FlyBase G6606.1 AATTAGTTTTAGTGTTAGACAAATAAGTTCCCGCAAGCAACAGAACTTACCAAAGTATTCAGATAAAGGAAAAACCTATTTAACAGATCTACGGATATATATTTACATACATGCATTTTCTAGTGAAATCGTATAATGAACT 104 7472563 0.971371604 15 100 586 0.959183673 1.672097858 0.020408163 0.346153846 0.537414966 104 4 2 141 2L:7472539-7472680 6 48.5 802 FBgn0260486 1355.053333 19.13333333 29.37 0.035791949 2.534843206 1.65134491 1 1 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2L 7472626 7472632 - 2L_7472626_7472632_- 0.671789348 0.671766461 0.671777904 1.61E-05 Ziz FBtr0330722|FBtr0330726|FBtr0330724|FBtr0332201|FBtr0330721|FBtr0330728|FBtr0330723|FBtr0330725|FBtr0330727 7472511|7472511|7472511|7472511|7472511|7472511|7472511|7472511|7472511 7473645|7473645|7473645|7473110|7473645|7473645|7473645|7473645|7473645 2L - 7472604 7472682 3'utr Ziz FlyBase G8509.1 GAAATTAGTTTTAGTGTTAGACAAATAAGTTCCCGCAAGCAACAGAACTTACCAAAGTATTCAGATAAAGGAAAAACCT 109 7472633 0.796257468 8 108 470 0.991935484 2.089905111 0.048387097 0.119266055 0.225806452 109 1 0 123 2L:7472604-7472682 7 Ziz FBtr0330725|FBtr0330727|FBtr0330728|FBtr0330723|FBtr0332201|FBtr0330721|FBtr0330722|FBtr0330726|FBtr0330724 7472511|7472511|7472511|7472511|7472511|7472511|7472511|7472511|7472511 7473645|7473645|7473645|7473645|7473110|7473645|7473645|7473645|7473645 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 7472539 7472680 3'utr Ziz FlyBase G6606.1 AATTAGTTTTAGTGTTAGACAAATAAGTTCCCGCAAGCAACAGAACTTACCAAAGTATTCAGATAAAGGAAAAACCTATTTAACAGATCTACGGATATATATTTACATACATGCATTTTCTAGTGAAATCGTATAATGAACT 104 7472633 0.971371604 15 100 586 0.959183673 1.672097858 0.020408163 0.346153846 0.537414966 104 4 2 141 2L:7472539-7472680 7 83.5 803 FBgn0260486 1355.053333 19.13333333 29.37 0.061621191 4.364111498 2.843037113 1 1 1 0.1 dme-miR-965-3p 6mer3-8 TACGCT 2L 76150 76155 + 2L_76150_76155_+ 0.999930934 0.999930225 0.99993058 4.95E-07 galectin FBtr0331680|FBtr0302164|FBtr0301733|FBtr0078101|FBtr0306540 76097|76097|76097|76097|76097 76211|76211|76211|76211|76211 2L + 76126 76181 3'utr galectin FlyBase G418.1 AGTTTAGCGACAATAAAAAAGTGATACGCTCGTGTTTCATTATACAATATTTTTGT 108 76150 0.834531796 8 105 633 0.974789916 2.064457989 0.25210084 0.074074074 0.159663866 108 3 0 116 2L:76126-76181 6 galectin FBtr0306540|FBtr0078101|FBtr0301733|FBtr0302164|FBtr0331680 76097|76097|76097|76097|76097 76211|76211|76211|76211|76211 TACGCT 6mer3-8 dme-miR-965-3p 2L + 76123 76174 3'utr galectin FlyBase G354.1 AGTAGTTTAGCGACAATAAAAAAGTGATACGCTCGTGTTTCATTATACAATA 67 76150 0.821748983 9 65 381 0.97826087 1.954242509 0.27173913 0.298507463 0.489130435 67 2 0 90 2L:76123-76174 6 85.5 804 FBgn0031213 880.07 63.82 97.16666667 0.097151363 1.339705421 0.879931389 0 0 0 0.1 dme-miR-980-5p 6mer2-7 AAAAAC 2L 7723243 7723248 - 2L_7723243_7723248_- 0.999864796 0.999889403 0.9998771 1.74E-05 CG13795 FBtr0343407 7723043 7723555 2L - 7723238 7723286 3'utr CG13795 FlyBase G8579.1 TTACATAGTTTGTCTATCGAGAGAGAGAGAGAGCTTTTAAAAACGTGTA 26 7723250 0.74404892 6 25 125 0.965517241 1.447158031 0.103448276 0.115384615 0.206896552 26 1 0 28 2L:7723238-7723286 6 CG13795 FBtr0343407 7723043 7723555 AAAAAC 6mer2-7 dme-miR-980-5p 2L - 7723239 7723277 3'utr CG13795 FlyBase G6651.1 TTGTCTATCGAGAGAGAGAGAGAGCTTTTAAAAACGTGT 16 7723250 0.717494537 3 16 80 1 1.380211242 0.041666667 0.4375 0.625 16 0 0 24 2L:7723239-7723277 6 18.5 805 FBgn0031937 195.5733333 10.18333333 15.44666667 0.094593673 1.816693944 1.1976694 2 2 2 0.1 dme-miR-305-3p 7mer-m8 ATGTGCC 2L 7786514 7786520 - 2L_7786514_7786520_- 0.674512908 0.674512725 0.674512817 1.41E-07 CG7149 FBtr0079496 7786158 7786899 2L - 7786496 7786537 3'utr CG7149 FlyBase G8600.1 ATGATCCGATAAGTATTATGTGCCTGAAGACAGCTACTGAAT 119 7786519 0.694548704 4 119 689 1 2.158362492 0.159722222 0.159663866 0.305555556 119 0 0 144 2L:7786496-7786537 7 CG7149 FBtr0079496 7786158 7786899 ATGTGCC 7mer-m8 dme-miR-305-3p 2L - 7786495 7786540 3'utr CG7149 FlyBase G6663.1 TGCATGATCCGATAAGTATTATGTGCCTGAAGACAGCTACTGAATG 79 7786519 0.688869565 4 79 451 1 2.06069784 0.243478261 0.291139241 0.513043478 79 0 0 115 2L:7786495-7786540 7 99 806 FBgn0031948 141.2833333 6.946666667 10.71666667 0.700719594 14.25143954 9.237947123 -1 -1 -1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 7786831 7786837 - 2L_7786831_7786837_- 0.796441993 0.799022802 0.797732398 0.001824901 CG7149 FBtr0079496|FBtr0079496|FBtr0079496|FBtr0343406|FBtr0343406|FBtr0343406 7786158|7786158|7786158|7786158|7786158|7786158 7786899|7786899|7786899|7786899|7786899|7786899 2L - 7786804 7786852 3'utr CG7149 FlyBase G8601.1 CAAAATCAACCATCTTGTGATATATAGTATATATACATATATATATAAA 27 7786839 0.9920715 6 20 234 0.724137931 0.720159303 0.034482759 0.074074074 0.137931034 27 5 3 21 2L:7786804-7786852 7 CG7149 FBtr0079496|FBtr0079496|FBtr0079496|FBtr0343406|FBtr0343406|FBtr0343406 7786158|7786158|7786158|7786158|7786158|7786158 7786899|7786899|7786899|7786899|7786899|7786899 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 7786814 7786852 3'utr CG7149 FlyBase G6665.1 CAAAATCAACCATCTTGTGATATATAGTATATATACATA 16 7786838 0.743488012 4 14 137 0.875 1.021189299 0 0.3125 0.541666667 16 2 1 21 2L:7786814-7786852 7 21 807 FBgn0031948 141.2833333 6.946666667 10.71666667 0.14863749 3.02303263 1.959564541 2 1 1.5 0.1 dme-miR-986-5p 6mer3-8 ATTCGA 2L 7791360 7791365 - 2L_7791360_7791365_- 0.710604083 0.660384723 0.685494403 0.035510478 LKR FBtr0343404 7791173 7791757 2L - 7791337 7791397 3'utr LKR FlyBase G8604.1 ATTCCAATTTTCCGTGCGATTTAATCTTTAAGATTCGATTTCCGTTCGATTGTCCCTGTAG 15 7791358 0.778500007 4 14 136 0.944444444 1.230448921 0.111111111 0.2 0.333333333 15 1 0 17 2L:7791337-7791397 6 LKR FBtr0343404 7791173 7791757 ATTCGA 6mer3-8 dme-miR-986-5p 2L - 7791323 7791394 3'utr LKR FlyBase G6667.1 CCAATTTTCCGTGCGATTTAATCTTTAAGATTCGATTTCCGTTCGATTGTCCCTGTAGCGCCTGGCAACCCG 7 7791358 0.98588637 3 7 60 1 1.079181246 0.166666667 0.571428571 0.75 7 0 0 12 2L:7791323-7791394 6 8 808 FBgn0025687 1820.93 67.29333333 103.6233333 0.004393359 0.118882504 0.077202689 -7 -7 -7 0.1 dme-miR-278-3p 7mer-m8 CCCACCG 2L 7791689 7791695 - 2L_7791689_7791695_- 0.576798354 0.567325244 0.572061799 0.006698564 LKR FBtr0079495|FBtr0343404 7791404|7791173 7791757|7791757 2L - 7791651 7791805 stop_codon LKR FlyBase G8606.1 CGCTCCGAGGGTCTGACTGCCACGGAAACCTCCAGATGGCTAAATTAAGTGATCTTAACTGATCCCGAGAAAATAGGCTTAAGTCTTCATTAATATTACTTTTTTGACTGCCCACCGCGTCGGGTGATACTTCTTGTTTTATCGCTCGGGTATTT 206 7791686 0.978352842 24 189 1276 0.925925926 1.653212514 0.152263374 0.165048544 0.29218107 206 14 4 225 2L:7791651-7791805 7 LKR FBtr0079495|FBtr0343404 7791404|7791173 7791757|7791757 CCCACCG 7mer-m8 dme-miR-278-3p 2L - 7791654 7791805 stop_codon LKR FlyBase G6669.1 CGCTCCGAGGGTCTGACTGCCACGGAAACCTCCAGATGGCTAAATTAAGTGATCTTAACTGATCCCGAGAAAATAGGCTTAAGTCTTCATTAATATTACTTTTTTGACTGCCCACCGCGTCGGGTGATACTTCTTGTTTTATCGCTCGGGTA 131 7791686 0.964811439 20 115 750 0.882051282 1.758407192 0.174358974 0.351145038 0.564102564 131 21 2 172 2L:7791654-7791805 7 87 809 FBgn0025687 1820.93 67.29333333 103.6233333 0.047777784 1.292847236 0.839579245 -9 -9 -9 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 7796640 7796645 - 2L_7796640_7796645_- 1 0.958636245 0.979318122 0.029248623 Herp FBtr0343403|FBtr0079493 7796312|7796544 7796929|7796929 2L - 7796624 7796665 3'utr Herp FlyBase G8627.1 AAGAACGTACTCTGTTTTTGATGTGAATAGTAGAATGTTTAT 7 7796650 0.986193808 7 7 59 1 1 0.3 0.285714286 0.5 7 0 0 10 2L:7796624-7796665 6 Herp FBtr0343403|FBtr0079493 7796312|7796544 7796929|7796929 ATGTGA 6mer3-8 dme-miR-1003-3p 2L - 7796571 7796657 3'utr Herp FlyBase G6686.1 ACTCTGTTTTTGATGTGAATAGTAGAATGTTTATAATCTGCACTGCAATCTGTGCTAGAGACGAACCTATGAAACCAAGATGCAATT 11 7796648 0.985970738 7 10 79 0.9375 1.176091259 0.0625 0.454545455 0.625 11 1 0 15 2L:7796571-7796657 6 5.5 810 FBgn0031950 371.7266667 21.11 32.2 0.014795818 0.260540028 0.170807453 5 3 4 0.1 dme-miR-92b-3p 6mer2-7 TGCAAT 2L 7820628 7820633 + 2L_7820628_7820633_+ 0.896271087 0.918108803 0.907189945 0.015441586 LanB1 FBtr0079491|FBtr0079490 7820389|7820389 7820771|7820771 2L + 7820477 7820760 3'utr LanB1 FlyBase G2842.1 CATCTAAATTGCCATATTCATGAACAAATAAGCAAATTGCGAAATACGAGAATCAAGTAAAGAACTACAAGAACAACTAGGAAGGCGACAGTTATTATGTAACCACTGTTAAGTTACCGTTACGTTTTGTACTCTAAGCGAAAACCAACACTGCAATGTTAATTTTAAAAATTGAGCGAAAGAAATCGATGCCTTCACTTTTAATGTGTACACACTGAGCTAAGTTTTTCTTATACTATCCCTATACCATTTTGTAATGCAATTAATGTAATTAAATAAAACTA 210 7820634 0.95072908 51 203 1356 0.969581749 2.40654018 0.091254753 0.214285714 0.372623574 210 8 0 255 2L:7820477-7820760 6 LanB1 FBtr0079490|FBtr0079491 7820389|7820389 7820771|7820771 TGCAAT 6mer2-7 dme-miR-92b-3p 2L + 7820482 7820704 3'utr LanB1 FlyBase G2242.1 AAATTGCCATATTCATGAACAAATAAGCAAATTGCGAAATACGAGAATCAAGTAAAGAACTACAAGAACAACTAGGAAGGCGACAGTTATTATGTAACCACTGTTAAGTTACCGTTACGTTTTGTACTCTAAGCGAAAACCAACACTGCAATGTTAATTTTAAAAATTGAGCGAAAGAAATCGATGCCTTCACTTTTAATGTGTACACACTGAGCTAAGTTTT 100 7820634 0.902890668 31 93 556 0.958333333 1.729704621 0.053571429 0.49 0.696428571 100 5 2 161 2L:7820482-7820704 6 34.5 811 FBgn0261800 22089.71333 425.3966667 651.42 0.001561813 0.081100777 0.052961223 -6 -6 -6 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG 2L 7825909 7825914 - 2L_7825909_7825914_- 0.999927005 0.999894086 0.999910545 2.33E-05 Rack1 FBtr0331237 7825627 7826760 2L - 7825718 7825940 3'utr Rack1 FlyBase G8649.2 CTGTGCTTCTCGCCCAACCGCTACTGGCTGTGCGTGGCCTACGGACCCTCGATCAAGATCTGGGATCTGGCATGCAAGAAGACCGTTGAGGAGCTGCGCCCCGAGGTCGTTTCGCCCACGTCGAAGGCCGATCAGCCCCAGTGCCTGTCCCTGGCCTGGTCCACCGACGGCCAGACTCTGTTCGCCGGCTACTCCGACAACACCATCCGCGTCTGGCAGGTGT 84 7825916 0.812652607 22 75 388 0.961904762 2.004321374 0.19047619 0.19047619 0.352380952 84 4 0 101 2L:7825718-7825940 6 Rack1 FBtr0331237 7825627 7826760 GCTGTG 6mer2-7 dme-miR-1008-3p 2L - 7825866 7825990 3'utr Rack1 FlyBase G6705.1 ATGACGGCAAGAACCTGTACACTCTGGAGCACAACGACATCATCAACGCCCTGTGCTTCTCGCCCAACCGCTACTGGCTGTGCGTGGCCTACGGACCCTCGATCAAGATCTGGGATCTGGCATGC 55 7825916 0.951693585 11 53 238 0.975903614 1.908485019 0.204819277 0.4 0.602409639 55 2 0 81 2L:7825866-7825990 6 38 812 FBgn0020618 8311.833333 901.1766667 1361.153333 0.004571795 0.042167093 0.027917501 2 2 2 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2L 7892660 7892665 - 2L_7892660_7892665_- 0.999856837 0.999994734 0.999925786 9.75E-05 Snoo FBtr0112719|FBtr0112718|FBtr0343409 7892323|7891185|7892323 7894084|7894084|7894084 2L - 7892606 7892685 3'utr Snoo FlyBase G8662.1 ACGTTTGCTAACTAGTTCTTAAGACTTCCCTCCGGCGAAGTTCTTTCCCTATTGTGAATGGCATCGAATGGTCCCCCTTT 25 7892660 0.843977212 5 24 196 0.964285714 1.431363764 0.035714286 0.12 0.214285714 25 1 0 27 2L:7892606-7892685 6 Snoo FBtr0112719|FBtr0112718|FBtr0343409 7892323|7891185|7892323 7894084|7894084|7894084 AAGACT 6mer3-8 dme-miR-14-3p 2L - 7892608 7892679 3'utr Snoo FlyBase G6717.1 GCTAACTAGTTCTTAAGACTTCCCTCCGGCGAAGTTCTTTCCCTATTGTGAATGGCATCGAATGGTCCCCCT 23 7892660 0.979164065 7 22 157 0.935483871 0.985276743 0.096774194 0.217391304 0.419354839 23 0 2 29 2L:7892608-7892679 6 12 813 FBgn0085450 1551.763333 25.89666667 39.58333333 0.007733138 0.4633801 0.303157895 -5 -5 -5 0.1 dme-miR-970-3p 8mer-A1 TCTTATGA 2L 7893169 7893176 - 2L_7893169_7893176_- 0.457385551 0.401729581 0.429557566 0.039354735 Snoo FBtr0112719|FBtr0112718|FBtr0343409 7892323|7891185|7892323 7894084|7894084|7894084 2L - 7893124 7893278 3'utr Snoo FlyBase G8667.1 TCGTAAGCTCTGCAAGACATTTAAACCCAAAACAATATTCAAAGCGAGGCTTTCGAAACAAAATTTAGGAAAGGTTTTTCTTTGGTCACACAGGCAGCTGGTTCTTATGACAGTGGGCATCGCCCGCTGGAAACCAATGTAATTACATTAAGTTT 141 7893177 0.921014649 20 128 860 0.917159763 2.190331698 0.218934911 0.156028369 0.295857988 141 14 0 155 2L:7893124-7893278 8 Snoo FBtr0112719|FBtr0112718|FBtr0343409 7892323|7891185|7892323 7894084|7894084|7894084 TCTTATGA 8mer-A1 dme-miR-970-3p 2L - 7893138 7893347 3'utr Snoo FlyBase G6719.1 ATTCAACGACAAATTTGTGCGTGTTTTTTACCACTTACTGCTTAACCTAATTAAGTTATTATTTTTATCTCGTAAGCTCTGCAAGACATTTAAACCCAAAACAATATTCAAAGCGAGGCTTTCGAAACAAAATTTAGGAAAGGTTTTTCTTTGGTCACACAGGCAGCTGGTTCTTATGACAGTGGGCATCGCCCGCTGGAAACCAATGTA 109 7893177 0.97705526 25 103 683 0.945454545 2.193124598 0.193939394 0.376146789 0.587878788 109 9 0 156 2L:7893138-7893347 8 87 814 FBgn0085450 1551.763333 25.89666667 39.58333333 0.05606525 3.359505728 2.197894737 1 1 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2L 7893377 7893383 - 2L_7893377_7893383_- 0.496915775 0.382682621 0.439799198 0.08077507 Snoo FBtr0112719|FBtr0112718|FBtr0343409 7892323|7891185|7892323 7894084|7894084|7894084 2L - 7893365 7893419 3'utr Snoo FlyBase G8668.1 AAACTTTCAACGTTGCTTGCAGAAATTATAAATGAAACCAAAGCTTTAAAAAAAA 19 7893375 0.715705283 7 16 102 0.85 1.230448921 0.05 0.052631579 0.1 19 3 0 17 2L:7893365-7893419 7 Snoo FBtr0112719|FBtr0112718|FBtr0343409 7892323|7891185|7892323 7894084|7894084|7894084 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 7893364 7893393 3'utr Snoo FlyBase G6720.1 TATAAATGAAACCAAAGCTTTAAAAAAAAT 7 7893375 0.666087311 3 7 29 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 2L:7893364-7893393 7 11 815 FBgn0085450 1551.763333 25.89666667 39.58333333 0.00708871 0.424765092 0.277894737 -8 -8 -8 0.1 dme-miR-970-3p 6mer2-7 CTTATG 2L 7893547 7893552 - 2L_7893547_7893552_- 0.999354526 0.999935416 0.999644971 0.000410758 Snoo FBtr0112719|FBtr0112717|FBtr0112718|FBtr0343409 7892323|7893429|7891185|7892323 7894084|7894084|7894084|7894084 2L - 7893543 7893577 3'utr Snoo FlyBase G8670.1 AACTTTCTTTGGAAAACTTTTTACCCTTATGCAAA 15 7893557 0.727693936 2 15 151 1 1.342422681 0.181818182 0.333333333 0.545454545 15 0 0 22 2L:7893543-7893577 6 Snoo FBtr0112719|FBtr0112717|FBtr0112718|FBtr0343409 7892323|7893429|7891185|7892323 7894084|7894084|7894084|7894084 CTTATG 6mer2-7 dme-miR-970-3p 2L - 7893534 7893577 3'utr Snoo FlyBase G6722.1 AACTTTCTTTGGAAAACTTTTTACCCTTATGCAAAATCTATTCA 9 7893557 0.988801266 3 9 91 1 1.079181246 0 0.333333333 0.5 9 0 0 12 2L:7893534-7893577 6 11.5 816 FBgn0085450 1551.763333 25.89666667 39.58333333 0.007410924 0.444072596 0.290526316 5 5 5 0.1 dme-miR-278-3p 6mer3-8 CCCACC 2L 8038761 8038766 + 2L_8038761_8038766_+ 0.995287076 0.943420279 0.969353677 0.036675366 Cka FBtr0306001|FBtr0079537 8038200|8038200 8040826|8040826 2L + 8038735 8038791 3'utr Cka FlyBase G2896.1 TGATCTTGTCGTGGATCTTTATTTTGCCCACCAGTTGGCGGGATCAACCCAAGATCG 22 8038770 0.960144831 5 22 113 1 1.361727836 0.173913043 0.045454545 0.086956522 22 0 0 23 2L:8038735-8038791 6 Cka FBtr0079537|FBtr0306001 8038200|8038200 8040826|8040826 CCCACC 6mer3-8 dme-miR-278-3p 2L + 8038752 8038787 3'utr Cka FlyBase G2287.1 TTTATTTTGCCCACCAGTTGGCGGGATCAACCCAAG 17 8038770 0.798979106 2 16 70 0.956521739 1.342422681 0.130434783 0.352941176 0.52173913 17 1 0 22 2L:8038752-8038787 6 19 817 FBgn0044323 2376.946667 58.08333333 89.27666667 0.007993448 0.327116212 0.212821566 -9 -9 -9 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 8039206 8039211 + 2L_8039206_8039211_+ 1 0.999998511 0.999999255 1.06E-06 Cka FBtr0306001|FBtr0079537 8038200|8038200 8040826|8040826 2L + 8039176 8039241 3'utr Cka FlyBase G2898.1 ATTAATTAGAGGACAGTCGAGGTGAGACTTTGATGAACGGCGGCCGGGTTTATATACGCAGGTAGC 34 8039206 0.757407323 7 34 168 1 1.579783597 0.421052632 0.088235294 0.184210526 34 0 0 38 2L:8039176-8039241 6 Cka FBtr0079537|FBtr0306001 8038200|8038200 8040826|8040826 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L + 8039176 8039229 3'utr Cka FlyBase G2289.1 ATTAATTAGAGGACAGTCGAGGTGAGACTTTGATGAACGGCGGCCGGGTTTATA 23 8039206 0.959537009 6 23 115 1 1.491361694 0.516129032 0.260869565 0.451612903 23 0 0 31 2L:8039176-8039229 6 27 818 FBgn0044323 2376.946667 58.08333333 89.27666667 0.011359111 0.464849354 0.302430646 0 0 0 0.1 dme-miR-2a-2-5p 7mer-A1 GATGAGA 2L 8039372 8039378 + 2L_8039372_8039378_+ 0.694914573 0.776882213 0.735898393 0.057959846 Cka FBtr0306001|FBtr0079537 8038200|8038200 8040826|8040826 2L + 8039304 8039411 3'utr Cka FlyBase G2899.1 ATATAATTTCAATTGTCATTACCAAGGGGAGTACGCAATGCTTGATGGATTAACCACGACCATGTGAGGATGAGATATAAATAATAACTGCAGGCAAGCTATAAACGT 18 8039391 0.937994938 13 17 82 0.954545455 1.322219295 0.409090909 0.222222222 0.363636364 18 1 0 21 2L:8039304-8039411 7 Cka FBtr0079537|FBtr0306001 8038200|8038200 8040826|8040826 GATGAGA 7mer-A1 dme-miR-2a-2-5p 2L + 8039316 8039417 3'utr Cka FlyBase G2290.1 TTGTCATTACCAAGGGGAGTACGCAATGCTTGATGGATTAACCACGACCATGTGAGGATGAGATATAAATAATAACTGCAGGCAAGCTATAAACGTATGCTA 15 8039373 0.955696432 8 15 70 1 1.397940009 0.08 0.533333333 0.72 15 0 0 25 2L:8039316-8039417 7 6.5 819 FBgn0044323 2376.946667 58.08333333 89.27666667 0.002734601 0.111908178 0.072807378 -19 -1 -10 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 8039613 8039618 + 2L_8039613_8039618_+ 0.999855656 0.999998951 0.999927304 0.000101328 Cka FBtr0306001|FBtr0079537 8038200|8038200 8040826|8040826 2L + 8039598 8039642 3'utr Cka FlyBase G2901.1 TGAACAGATTTAGATATGTGACTTGAACGTGAACGCCGAGCAACT 16 8039621 0.96875398 5 14 79 0.947368421 1.255272505 0.263157895 0.1875 0.315789474 16 1 0 18 2L:8039598-8039642 6 Cka FBtr0079537|FBtr0306001 8038200|8038200 8040826|8040826 ATGTGA 6mer3-8 dme-miR-1003-3p 2L + 8039597 8039649 3'utr Cka FlyBase G2291.1 ATGAACAGATTTAGATATGTGACTTGAACGTGAACGCCGAGCAACTCAATATT 13 8039621 0.983132895 4 11 82 0.866666667 0.812913357 0.4 0.153846154 0.266666667 13 1 1 13 2L:8039597-8039649 6 12.5 820 FBgn0044323 2376.946667 58.08333333 89.27666667 0.005258847 0.215208034 0.140014188 -8 -8 -8 0.1 dme-miR-980-5p 6mer2-7 AAAAAC 2L 8039784 8039789 + 2L_8039784_8039789_+ 0.999802784 0.999932766 0.999867775 9.19E-05 Cka FBtr0306001|FBtr0079537 8038200|8038200 8040826|8040826 2L + 8039747 8039834 3'utr Cka FlyBase G2902.2 CCAAAAACTTGATATTCGAAACCGACGAATCAGAATCAAAAACGATTGCGATCTGTGTACACCAAGCAAATCCTCTATTATTTAAATT 15 8039793 0.75537921 8 13 74 0.842105263 0.602059991 0.157894737 0.133333333 0.315789474 15 0 3 16 2L:8039747-8039834 6 Cka FBtr0079537|FBtr0306001 8038200|8038200 8040826|8040826 AAAAAC 6mer2-7 dme-miR-980-5p 2L + 8039772 8039820 3'utr Cka FlyBase G2293.1 CGAATCAGAATCAAAAACGATTGCGATCTGTGTACACCAAGCAAATCCT 6 8039792 0.971754123 5 6 35 1 0.954242509 0.333333333 0.333333333 0.555555556 6 0 0 9 2L:8039772-8039820 6 6 821 FBgn0044323 2376.946667 58.08333333 89.27666667 0.002524247 0.103299857 0.06720681 -9 -8 -8.5 0.1 dme-miR-318-3p 6mer3-8 CCCAGT 2L 8053828 8053833 + 2L_8053828_8053833_+ 0.970379696 0.994972197 0.982675947 0.017389524 CG7466 FBtr0344789|FBtr0344788 8053047|8053047 8054326|8054326 2L + 8053804 8053849 3'utr CG7466 FlyBase G2914.1 AAAGTATTAATTATGATATTCCTTCCCAGTTGTGGTGGCTAGCATT 33 8053822 0.650022033 7 32 300 0.974358974 1.579783597 0.128205128 0.151515152 0.282051282 33 1 0 38 2L:8053804-8053849 6 CG7466 FBtr0344789|FBtr0344788 8053047|8053047 8054326|8054326 CCCAGT 6mer3-8 dme-miR-318-3p 2L + 8053809 8053848 3'utr CG7466 FlyBase G2301.1 ATTAATTATGATATTCCTTCCCAGTTGTGGTGGCTAGCAT 15 8053822 0.671704879 4 12 135 0.80952381 0.62838893 0.333333333 0.333333333 0.523809524 15 1 3 17 2L:8053809-8053848 6 23.5 822 FBgn0031981 647.3533333 7.71 11.75333333 0.036301659 3.047989624 1.999432785 6 6 6 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 8053898 8053903 + 2L_8053898_8053903_+ 0.999884268 0.999883239 0.999883753 7.78E-07 CG7466 FBtr0344789|FBtr0344788 8053047|8053047 8054326|8054326 2L + 8053866 8053937 3'utr CG7466 FlyBase G2915.1 TAGCTCTCTACTGCGCACTCTTACGCACCGGTGTACCTACTATTTTAAGAACGAGAAACTATTTTTATGATC 289 8053897 0.914472987 11 284 2129 0.987692308 2.205475037 0.04 0.096885813 0.196923077 289 3 1 321 2L:8053866-8053937 6 CG7466 FBtr0344789|FBtr0344788 8053047|8053047 8054326|8054326 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 8053859 8053920 3'utr CG7466 FlyBase G2302.1 AGTTCTTTAGCTCTCTACTGCGCACTCTTACGCACCGGTGTACCTACTATTTTAAGAACGAG 191 8053897 0.916510197 7 188 1359 0.982578397 2.149219113 0.059233449 0.371727749 0.581881533 191 4 1 282 2L:8053859-8053920 6 230.5 823 FBgn0031981 647.3533333 7.71 11.75333333 0.356065209 29.89623865 19.61145774 1 1 1 0.1 dme-miR-184-3p 7mer-A1 CCGTCCA 2L 8074388 8074394 - 2L_8074388_8074394_- 0.757168668 0.812443295 0.784805981 0.039085044 Mcr FBtr0079543 8074115 8074955 2L - 8074254 8074437 3'utr Mcr FlyBase G8829.1 GAATACATTTTTAAACGAAATGAAGTGAAAATCGTTGAAGAAACCGTCCAATTAATTTATGCAAATAATGAATCTGCATAGTTTGTAAGTTTTATACGTATATACGCCTTCATATGAACCACAATTAGTTTATAAATTCCCAACACAAATCTCACATAGCCATGTACATGAAGCTACTAAGCGA 182 8074385 0.845855747 25 164 1271 0.906862745 1.966141733 0.274509804 0.10989011 0.205882353 182 18 1 185 2L:8074254-8074437 7 Mcr FBtr0079543 8074115 8074955 CCGTCCA 7mer-A1 dme-miR-184-3p 2L - 8074239 8074417 3'utr Mcr FlyBase G6857.1 TGAAGTGAAAATCGTTGAAGAAACCGTCCAATTAATTTATGCAAATAATGAATCTGCATAGTTTGTAAGTTTTATACGTATATACGCCTTCATATGAACCACAATTAGTTTATAAATTCCCAACACAAATCTCACATAGCCATGTACATGAAGCTACTAAGCGAGAAACAAGGAAATTT 131 8074385 0.982666893 25 120 903 0.921052632 1.640978057 0.405263158 0.328244275 0.536842105 131 12 3 175 2L:8074239-8074417 7 100 824 FBgn0267488 1127.406667 21.51 32.91333333 0.088699138 4.649000465 3.038282358 -9 -9 -9 0.1 dme-miR-184-3p 8mer-A1 TCCGTCCA 2L 8074805 8074812 - 2L_8074805_8074812_- 0.630471204 0.630491576 0.63048139 1.44E-05 Mcr FBtr0079543 8074115 8074955 2L - 8074780 8074841 3'utr Mcr FlyBase G8830.2 AGTTTTTTTGTTTGCCAACGAAATTGCATTCCGTCCAAAAATGCTGGTCAACATTTTGGTTT 5777 8074813 0.742386623 15 5720 31649 0.991896976 2.689879423 0.277239184 0.157348105 0.295615685 5777 43 13 6855 2L:8074780-8074841 8 Mcr FBtr0079543 8074115 8074955 TCCGTCCA 8mer-A1 dme-miR-184-3p 2L - 8074764 8074841 3'utr Mcr FlyBase G6862.1 AGTTTTTTTGTTTGCCAACGAAATTGCATTCCGTCCAAAAATGCTGGTCAACATTTTGGTTTTATTTTTAGTTCTTTT 3688 8074813 0.924325697 17 3625 19427 0.983850481 2.558068254 0.288332426 0.369577007 0.578116494 3688 75 14 5422 2L:8074764-8074841 8 4719 825 FBgn0267488 1127.406667 21.51 32.91333333 4.185712343 219.3863319 143.3765445 1 1 1 0.1 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2L 8108095 8108100 + 2L_8108095_8108100_+ 0.943326005 0.999991217 0.971658611 0.040068347 Bsg FBtr0079570|FBtr0079567|FBtr0079571|FBtr0079568|FBtr0079566|FBtr0079572|FBtr0079569|FBtr0079573 8107883|8107883|8107883|8107883|8107883|8107883|8107883|8107883 8109458|8109458|8116531|8116531|8109458|8109458|8109458|8109458 2L + 8108041 8108144 5'utr Bsg FlyBase G2933.1 GCAACAGAAGAGGAAAAAGTTGAAATTTTAGTTTTATACTGCAAATTAAAGACGTTGAAGCTGCAGGCGAATGCAGACCAGACACCAACATAACCATACGAAAC 34 8108087 0.97015453 10 34 195 1 1.612783857 0.365853659 0.176470588 0.317073171 34 0 0 41 2L:8108041-8108144 6 Bsg FBtr0079569|FBtr0079573|FBtr0079566|FBtr0079572|FBtr0079571|FBtr0079568|FBtr0079570|FBtr0079567 8107883|8107883|8107883|8107883|8107883|8107883|8107883|8107883 8109458|8109458|8109458|8109458|8116531|8116531|8109458|8109458 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2L + 8108046 8108130 5'utr Bsg FlyBase G2320.1 AGAAGAGGAAAAAGTTGAAATTTTAGTTTTATACTGCAAATTAAAGACGTTGAAGCTGCAGGCGAATGCAGACCAGACACCAACA 26 8108087 0.978337097 12 24 161 0.9375 1.653212514 0.270833333 0.5 0.729166667 26 3 0 45 2L:8108046-8108130 6 20 826 FBgn0261822 8004.233333 323.89 495.0033333 0.002498678 0.061749359 0.040403768 8 8 8 0.1 dme-miR-305-3p 6mer2-7 TGTGCC 2L 8108394 8108399 + 2L_8108394_8108399_+ 0.999844763 0.999817171 0.999830967 1.95E-05 Bsg FBtr0079570|FBtr0079567|FBtr0079571|FBtr0079568|FBtr0079566|FBtr0079572|FBtr0079569|FBtr0079573 8107883|8107883|8107883|8107883|8107883|8107883|8107883|8107883 8109458|8109458|8116531|8116531|8109458|8109458|8109458|8109458 2L + 8108370 8108521 5'utr Bsg FlyBase G2934.3 ATTTTGTATTATAATGAAGTCCACTGTGCCTGGAGCGTCGCAAAGAAATTAATAAAATAACGAGACCCAGAGTAGTGAAATGGAGAGTGATCCACTAATCGTTGTGGTTTCTACTTTTTTTTCGATGTGTGCTAAGCGAAAGCAAATATATT 507 8108394 0.844704866 16 499 2393 0.988448845 2.476396827 0.268976898 0.169625247 0.305280528 507 6 1 599 2L:8108370-8108521 6 Bsg FBtr0079569|FBtr0079573|FBtr0079566|FBtr0079572|FBtr0079571|FBtr0079568|FBtr0079570|FBtr0079567 8107883|8107883|8107883|8107883|8107883|8107883|8107883|8107883 8109458|8109458|8109458|8109458|8116531|8116531|8109458|8109458 TGTGCC 6mer2-7 dme-miR-305-3p 2L + 8108373 8108417 5'utr Bsg FlyBase G2321.2 TTGTATTATAATGAAGTCCACTGTGCCTGGAGCGTCGCAAAGAAA 301 8108394 0.779209661 6 296 1285 0.98553719 2.678518379 0.274793388 0.438538206 0.650826446 301 7 0 477 2L:8108373-8108417 6 374.5 827 FBgn0261822 8004.233333 323.89 495.0033333 0.046787741 1.156256754 0.756560562 0 0 0 0.1 dme-miR-304-5p 7mer-m8 TGAGATT 2L 8109358 8109364 + 2L_8109358_8109364_+ 0.62016873 0.620203331 0.62018603 2.45E-05 Bsg FBtr0079570|FBtr0079567|FBtr0079571|FBtr0079568|FBtr0079566|FBtr0079572|FBtr0079569|FBtr0079573 8107883|8107883|8107883|8107883|8107883|8107883|8107883|8107883 8109458|8109458|8116531|8116531|8109458|8109458|8109458|8109458 2L + 8109288 8109413 stop_codon Bsg FlyBase G2938.2 TGTATCTAGTATCTAAACACTTGTGCTATTCTCTACCGATTACAACTATCCATTATGATTTTGTGAGTTTTGAGATTGATTTCTACCGAAATATAAAACAAACAACAACAACAAAAAATACAATTG 182 8109358 0.985359599 23 171 1745 0.952380952 1.823908741 0.076190476 0.142857143 0.257142857 182 8 2 200 2L:8109288-8109413 7 Bsg FBtr0079569|FBtr0079573|FBtr0079566|FBtr0079572|FBtr0079571|FBtr0079568|FBtr0079570|FBtr0079567 8107883|8107883|8107883|8107883|8107883|8107883|8107883|8107883 8109458|8109458|8109458|8109458|8116531|8116531|8109458|8109458 TGAGATT 7mer-m8 dme-miR-304-5p 2L + 8109283 8109386 stop_codon Bsg FlyBase G2327.1 TTCTTTGTATCTAGTATCTAAACACTTGTGCTATTCTCTACCGATTACAACTATCCATTATGATTTTGTGAGTTTTGAGATTGATTTCTACCGAAATATAAAAC 113 8109358 0.871448912 26 110 1107 0.973856209 1.872156273 0.078431373 0.283185841 0.470588235 113 3 1 149 2L:8109283-8109386 7 83.5 828 FBgn0261822 8004.233333 323.89 495.0033333 0.01043198 0.257803575 0.168685733 0 0 0 0.1 dme-miR-252-5p 7mer-m8 GTACTTA 2L 8117339 8117345 - 2L_8117339_8117345_- 0.588299917 0.588299912 0.588299914 0 mon2 FBtr0339674|FBtr0301229 8117290|8116963 8117519|8117519 2L - 8117311 8117357 3'utr mon2 FlyBase G8843.1 CTAAGCATCTATGTACTTACATACATACCTAAACATATATATATATA 8 8117346 0.979569678 3 8 61 1 0.954242509 0 0.125 0.222222222 8 0 0 9 2L:8117311-8117357 7 mon2 FBtr0339674|FBtr0301229 8117290|8116963 8117519|8117519 GTACTTA 7mer-m8 dme-miR-252-5p 2L - 8117333 8117396 3'utr mon2 FlyBase G6869.1 GAATGTTAATCTTAGCCCTCCCTCGCATAGATGTAACGACTAAGCATCTATGTACTTACATACA 9 8117346 0.733078333 5 7 57 0.941176471 1.204119983 0.705882353 0.444444444 0.705882353 9 1 0 16 2L:8117333-8117396 7 6.5 829 FBgn0031985 610.5 12.61 19.26333333 0.010647011 0.515463918 0.337428621 1 1 1 0.1 dme-miR-1008-3p 7mer-m8 AGCTGTG 2L 8117463 8117469 - 2L_8117463_8117469_- 0.671790567 0.639358055 0.655574311 0.022933241 mon2 FBtr0339674|FBtr0301229 8117290|8116963 8117519|8117519 2L - 8117432 8117491 3'utr mon2 FlyBase G8844.1 AGTCCACATCCAGACTGGTGACAGCTGTGCGATGTTTTTCTTAGTTGTTTAAGCGCGAAC 6 8117459 0.929877148 4 6 37 1 0.954242509 0.333333333 0.5 0.666666667 6 0 0 9 2L:8117432-8117491 7 mon2 FBtr0339674|FBtr0301229 8117290|8116963 8117519|8117519 AGCTGTG 7mer-m8 dme-miR-1008-3p 2L - 8117455 8117556 stop_codon mon2 FlyBase G6870.2 AAACGACAATGTAATACAATCGAATGGACAAGAGTGAAAGTATGCCTAGACACAGACAGAGACCAAGTCCACATCCAGACTGGTGACAGCTGTGCGATGTTT 17 8117473 0.931438492 8 13 64 0.84375 1.130333768 0.4375 0.588235294 0.78125 17 4 1 27 2L:8117455-8117556 7 4 830 FBgn0031985 610.5 12.61 19.26333333 0.006552007 0.317208565 0.207648382 -10 4 -3 0.1 dme-miR-980-3p 8mer-A1 GGCAGCTA 2L 8133756 8133763 + 2L_8133756_8133763_+ 0.668571707 0.667415359 0.667993533 0.000817628 CG8668 FBtr0079576|FBtr0339671 8133642|8133642 8133989|8133989 2L + 8133461 8133862 stop_codon CG8668 FlyBase G2955.1 ACCACGGGCATAGTAGCCAAGAGCCTTAATGTTAAGCGGGTGCAGGCGAACGAGTTCGTTAACCGACGCATCTCATTTAACCCGTGCAACATCCGCAACGCAATCAGCGTGCACATGATCAAGTCGAACGAACAATTCGATTTGTGGAAAAAGCTGCTGGATCAGACCACCAAGTGTAAATAGTATTTTAAGTTTAGGGTGTAGTTTTTCCGGTATGAAGAACACAGTGTGGTCTTTCGAGAAAAAAGGGGCGAACATATATGTAATATGGTAGGAGTAGAGAATGATTAGCAAAGGCAGCTATATAGGATTATAAAATTAGACTAGTCTCTAAGTCCTAGAAATATCACAAATTCTGTTGTCGATCTCTGCATCCGCCTATATGCATGCGATCCAACAACG 527 8133748 0.899540704 58 483 3354 0.921221865 2.156094631 0.118971061 0.155597723 0.284565916 527 46 3 573 2L:8133461-8133862 8 CG8668 FBtr0079576|FBtr0339671 8133642|8133642 8133989|8133989 GGCAGCTA 8mer-A1 dme-miR-980-3p 2L + 8133704 8133880 3'utr CG8668 FlyBase G2342.2 AAAAGGGGCGAACATATATGTAATATGGTAGGAGTAGAGAATGATTAGCAAAGGCAGCTATATAGGATTATAAAATTAGACTAGTCTCTAAGTCCTAGAAATATCACAAATTCTGTTGTCGATCTCTGCATCCGCCTATATGCATGCGATCCAACAACGATTCGAGTACATTTTAAA 361 8133748 0.977729168 36 315 2289 0.897482014 1.795010559 0.120503597 0.376731302 0.595323741 361 50 7 499 2L:8133704-8133880 8 287.5 831 FBgn0031988 2594.666667 107.8333333 165.63 0.110804214 2.666151468 1.735796655 8 8 8 0.1 dme-miR-79-3p 7mer-A1 AGCTTTA 2L 8134398 8134404 - 2L_8134398_8134404_- 0.797953144 0.800608644 0.799280894 0.001877722 CG8552 FBtr0339673|FBtr0302595|FBtr0344863|FBtr0079641 8134245|8134245|8134245|8134245 8134622|8134622|8134622|8134622 2L - 8134308 8134424 3'utr CG8552 FlyBase G8873.1 AAAACCGTAGCAAGTTCTTGAGCTTTACAAAATTACCTATGTATTGATCGGATTGGCACCCATGAGACCTATTTGTTATTTTTGTAATATCGCCTGTGTAACAACTAACTTTGTAAC 37 8134406 0.971145721 11 36 275 0.979166667 1.672097858 0.104166667 0.243243243 0.416666667 37 1 0 47 2L:8134308-8134424 7 CG8552 FBtr0344863|FBtr0079641|FBtr0339673|FBtr0302595 8134245|8134245|8134245|8134245 8134622|8134622|8134622|8134622 AGCTTTA 7mer-A1 dme-miR-79-3p 2L - 8134305 8134424 3'utr CG8552 FlyBase G6888.1 AAAACCGTAGCAAGTTCTTGAGCTTTACAAAATTACCTATGTATTGATCGGATTGGCACCCATGAGACCTATTTGTTATTTTTGTAATATCGCCTGTGTAACAACTAACTTTGTAACATT 13 8134406 0.982793012 8 12 96 1 1.322219295 0.142857143 0.538461538 0.714285714 13 0 0 21 2L:8134305-8134424 7 13 832 FBgn0031990 1987.903333 36.46 55.94333333 0.006539553 0.356555129 0.232378002 2 2 2 0.1 dme-miR-1006-3p 6mer2-7 GAATTT 2L 818173 818178 - 2L_818173_818178_- 0.998927467 0.999992691 0.999460079 0.00075321 CG3876 FBtr0078039 818077 818506 2L - 818151 818218 3'utr CG3876 FlyBase G6658.1 TAGGAACAAGGCTTCAATAAGGTTTTATTTTATACGTACTGAATTTGCTTTTATTGGCTTCTAATGTT 10 818174 0.99356708 3 7 96 0.909090909 1 0.181818182 0.1 0.181818182 10 1 0 10 2L:818151-818218 6 CG3876 FBtr0078039 818077 818506 GAATTT 6mer2-7 dme-miR-1006-3p 2L - 818144 818240 3'utr CG3876 FlyBase G5207.1 ATTATTTATACACATACTCATTTAGGAACAAGGCTTCAATAAGGTTTTATTTTATACGTACTGAATTTGCTTTTATTGGCTTCTAATGTTCTAATTC 15 818174 0.987685901 10 14 154 0.958333333 1.06069784 0.041666667 0.533333333 0.708333333 15 0 1 23 2L:818144-818240 6 8 833 FBgn0031284 55.33333333 4.87 7.336666667 0.144578313 1.642710472 1.090413448 -4 -4 -4 0.1 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 818310 818317 - 2L_818310_818317_- 0.62536173 0.62536232 0.625362025 4.24E-07 CG3876 FBtr0078039 818077 818506 2L - 818272 818375 3'utr CG3876 FlyBase G6659.1 GAGGGATTCCGAGAGGAGACGATTCAGTATGACAGGATCTGATGCATACACACGCTTTTAGCTTTAGGCTCTAACACGATTTTACACCTAAAGGATCTAGTTAA 243 818318 0.985040237 14 236 1911 0.966666667 2.115610512 0.22962963 0.090534979 0.181481481 243 8 1 261 2L:818272-818375 8 CG3876 FBtr0078039 818077 818506 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 818270 818376 3'utr CG3876 FlyBase G5208.1 CGAGGGATTCCGAGAGGAGACGATTCAGTATGACAGGATCTGATGCATACACACGCTTTTAGCTTTAGGCTCTAACACGATTTTACACCTAAAGGATCTAGTTAAAT 183 818318 0.894220167 17 178 1423 0.977198697 2.176091259 0.159609121 0.459016393 0.67752443 183 6 1 300 2L:818270-818376 8 170.5 834 FBgn0031284 55.33333333 4.87 7.336666667 3.081325301 35.01026694 23.23943662 1 1 1 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 8189487 8189492 + 2L_8189487_8189492_+ 0.957268116 0.99992198 0.978595048 0.030160862 Piezo FBtr0335176|FBtr0335178|FBtr0335182|FBtr0335183|FBtr0335175|FBtr0335177|FBtr0335180|FBtr0335179|FBtr0335181 8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128 8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137 2L + 8189483 8189518 3'utr Piezo FlyBase G2997.1 ATAATGATGAAAACTCATATTCAGGGAATTTAGCAT 8 8189502 0.727504568 2 5 50 0.75 0.954242509 0.083333333 0.5 0.666666667 8 3 0 9 2L:8189483-8189518 6 Piezo FBtr0335181|FBtr0335179|FBtr0335180|FBtr0335177|FBtr0335175|FBtr0335183|FBtr0335182|FBtr0335178|FBtr0335176 8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128 8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L + 8189479 8189516 3'utr Piezo FlyBase G2368.1 AATAATAATGATGAAAACTCATATTCAGGGAATTTAGC 7 8189489 0.825528972 3 6 43 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 2L:8189479-8189516 6 6 835 FBgn0264953 3209.976667 41.34 63.05333333 0.001869172 0.145137881 0.095157539 -15 -2 -8.5 0.1 dme-miR-305-3p 6mer2-7 TGTGCC 2L 8189682 8189687 + 2L_8189682_8189687_+ 1 0.907952214 0.953976107 0.065087624 Piezo FBtr0335176|FBtr0335178|FBtr0335182|FBtr0335183|FBtr0335175|FBtr0335177|FBtr0335180|FBtr0335179|FBtr0335181 8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128 8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137 2L + 8189663 8189710 3'utr Piezo FlyBase G2999.1 TCTATGCTGTTTGCCTAATTGTGCCCTTTACAACTGATTAAATATATT 11 8189689 0.857526164 6 11 100 1 1.176091259 0 0.363636364 0.533333333 11 0 0 15 2L:8189663-8189710 6 Piezo FBtr0335181|FBtr0335179|FBtr0335180|FBtr0335177|FBtr0335175|FBtr0335183|FBtr0335182|FBtr0335178|FBtr0335176 8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128 8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137 TGTGCC 6mer2-7 dme-miR-305-3p 2L + 8189681 8189702 3'utr Piezo FlyBase G2369.1 TTGTGCCCTTTACAACTGATTA 5 8189690 0.660049579 3 5 32 1 1 0 0.6 0.8 5 0 0 10 2L:8189681-8189702 6 8 836 FBgn0264953 3209.976667 41.34 63.05333333 0.00249223 0.193517175 0.126876718 -7 -8 -7.5 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 2L 8189774 8189779 + 2L_8189774_8189779_+ 0.999997573 0.999999631 0.999998602 1.41E-06 Piezo FBtr0335176|FBtr0335178|FBtr0335182|FBtr0335183|FBtr0335175|FBtr0335177|FBtr0335180|FBtr0335179|FBtr0335181 8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128 8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137 2L + 8189749 8189814 3'utr Piezo FlyBase G3000.1 CGATACATATTGCATATATAGAGCGTTGACTTTAGTTTTAGGCATATCACTTGACATATTTTTGTA 95 8189774 0.989815296 11 91 899 0.981818182 1.73239376 0.054545455 0.136842105 0.254545455 95 1 1 108 2L:8189749-8189814 6 Piezo FBtr0335181|FBtr0335179|FBtr0335180|FBtr0335177|FBtr0335175|FBtr0335183|FBtr0335182|FBtr0335178|FBtr0335176 8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128 8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137 TTGACT 6mer3-8 dme-miR-1012-3p 2L + 8189724 8189796 3'utr Piezo FlyBase G2370.1 ACTGTTTACTACTATATAACTAAATCGATACATATTGCATATATAGAGCGTTGACTTTAGTTTTAGGCATATC 52 8189774 0.789974715 11 50 462 0.975 1.892094603 0.025 0.384615385 0.6 52 2 0 78 2L:8189724-8189796 6 68.5 837 FBgn0264953 3209.976667 41.34 63.05333333 0.021339719 1.656990808 1.086381899 0 0 0 0.1 dme-bantam-3p 6mer3-8 TGATCT 2L 8192604 8192609 - 2L_8192604_8192609_- 0.999476092 0.998457272 0.998966682 0.0007204 CG8475 FBtr0079639 8190952 8194921 2L - 8192578 8192638 5'utr CG8475 FlyBase G8910.1 ATCGAGCATCTTGACTTTATGAACCAAAGTGATCTGACCGACAACGAGAATGCGTTCTCGC 37 8192605 0.786975908 7 36 140 0.977777778 1.643452676 0.111111111 0.189189189 0.333333333 37 1 0 44 2L:8192578-8192638 6 CG8475 FBtr0079639 8190952 8194921 TGATCT 6mer3-8 dme-bantam-3p 2L - 8192590 8192627 5'utr CG8475 FlyBase G6907.1 TGACTTTATGAACCAAAGTGATCTGACCGACAACGAGA 25 8192606 0.922985833 4 23 82 1 1.62324929 0.023809524 0.4 0.642857143 25 0 0 42 2L:8192590-8192627 6 28 838 FBgn0031995 561.1466667 16.95666667 25.92 0.049897828 1.651267938 1.080246914 -4 -3 -3.5 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 2L 8200319 8200325 + 2L_8200319_8200325_+ 0.521223854 0.521223521 0.521223688 2.83E-07 PGAP5 FBtr0079587 8200280 8200652 2L + 8200304 8200394 3'utr PGAP5 FlyBase G3007.1 AGGCATATCCTCTTTTGTGATTTACGCCTGATTGGGGCTTAGTTTAGACTAGATACGCCAGATTCCAGACTCAGATCCCAGATCCAGATCC 77 8200325 0.77869604 14 72 714 0.934782609 1.633468456 0.336956522 0.142857143 0.282608696 77 5 1 86 2L:8200304-8200394 7 PGAP5 FBtr0079587 8200280 8200652 TGTGATT 7mer-m1 dme-miR-308-3p 2L + 8200303 8200358 3'utr PGAP5 FlyBase G2375.1 AAGGCATATCCTCTTTTGTGATTTACGCCTGATTGGGGCTTAGTTTAGACTAGATA 53 8200325 0.712634575 12 50 479 0.942028986 1.335792102 0.434782609 0.264150943 0.434782609 53 2 2 65 2L:8200303-8200358 7 52.5 839 FBgn0031997 251.1233333 19.52 29.58 0.209060621 2.68954918 1.77484787 -6 -6 -6 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 8200491 8200498 - 2L_8200491_8200498_- 0.649318694 0.648926743 0.649122718 0.000277186 SLC5A11 FBtr0079637|FBtr0079637|FBtr0079637 8200463|8200463|8200463 8200884|8200884|8200884 2L - 8200474 8200605 3'utr SLC5A11 FlyBase G8915.1 CTTTACTTTCCAGCCTTTGTTCAAGCATTATTTTTTTGGCATTTTCGATTTGTAGTCAGCAGACTGTGTCTCATTATGTATTCCGTTTGACTTTACAAGCATAATGTCTGTGATAAATTCAATAAATAGATC 96 8200500 0.985436533 17 87 760 0.923728814 1.736396502 0.110169492 0.1875 0.338983051 96 8 1 109 2L:8200474-8200605 8 SLC5A11 FBtr0079637|FBtr0079637|FBtr0079637 8200463|8200463|8200463 8200884|8200884|8200884 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 8200482 8200518 3'utr SLC5A11 FlyBase G6910.1 TGACTTTACAAGCATAATGTCTGTGATAAATTCAATA 45 8200500 0.711099359 8 39 342 0.884057971 1.785329835 0.057971014 0.333333333 0.565217391 45 8 0 61 2L:8200482-8200518 8 60 840 FBgn0031998 248.32 11.31333333 17.32 0.241623711 5.303476724 3.464203233 2 2 2 0.1 dme-miR-184-5p 6mer3-8 TGATAA 2L 8209669 8209674 - 2L_8209669_8209674_- 0.999851716 0.99978017 0.999815943 5.06E-05 Su(var)205 FBtr0079636|FBtr0079635 8209624|8209624 8209834|8209834 2L - 8209625 8209707 3'utr Su(var)205 FlyBase G8917.1 TCCATAAATGTCCAGAGTCAGTGTCTGTATTTATGATAACCATTTTCAATAAATAAAAAAAACCTTTATTCTGCTGGAGCCTA 18 8209664 0.676731094 12 18 127 1 1.431363764 0.333333333 0.333333333 0.555555556 18 0 0 27 2L:8209625-8209707 6 Su(var)205 FBtr0079635|FBtr0079636 8209624|8209624 8209834|8209834 TGATAA 6mer3-8 dme-miR-184-5p 2L - 8209625 8209688 3'utr Su(var)205 FlyBase G6914.1 AGTGTCTGTATTTATGATAACCATTTTCAATAAATAAAAAAAACCTTTATTCTGCTGGAGCCTA 10 8209676 0.98210971 6 10 75 1 1.176091259 0 0.4 0.6 10 0 0 15 2L:8209625-8209688 6 7.5 841 FBgn0003607 3176.68 396.8566667 605.5133333 0.002360955 0.018898511 0.012386185 -10 2 -4 0.1 dme-miR-14-3p 6mer2-7 AGACTG 2L 820991 820996 + 2L_820991_820996_+ 0.999987848 0.999992948 0.999990398 3.61E-06 Clp FBtr0078011 820968 821209 2L + 820964 821017 stop_codon Clp FlyBase G895.1 AAGTAGGACGCTCTGCTCTGTATGATTAGACTGTAAGAGTGCAGAAATAAAGGT 13 820989 0.980649326 4 13 100 1 1.113943352 0.538461538 0 0 13 0 0 13 2L:820964-821017 6 Clp FBtr0078011 820968 821209 AGACTG 6mer2-7 dme-miR-14-3p 2L + 820964 821008 stop_codon Clp FlyBase G714.1 AAGTAGGACGCTCTGCTCTGTATGATTAGACTGTAAGAGTGCAGA 9 820989 0.976518707 3 9 64 1 1.113943352 0.384615385 0.444444444 0.615384615 9 0 0 13 2L:820964-821008 6 11 842 FBgn0015621 194.6666667 19.23666667 29.43666667 0.056506849 0.57182464 0.373683615 2 2 2 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 2L 821129 821135 + 2L_821129_821135_+ 0.6201071 0.620203984 0.620155542 6.85E-05 Clp FBtr0078011 820968 821209 2L + 821046 821190 3'utr Clp FlyBase G896.1 AGTCCAGAGGTCGTAGGTTCCCAACTTCCGCAGGCGAACGTTTCAATCATTCTGTGTTTAAAGTGTATGTTAAGAAACTCATTTGCATTTTTGAAAAAAGTCCCTAGAACTGCCAGTAGAACGTATTGTGTTATCAGCGAAATAA 54 821128 0.839590949 13 49 388 0.915254237 1.255272505 0.338983051 0.092592593 0.169491525 54 3 2 54 2L:821046-821190 7 Clp FBtr0078011 820968 821209 TGCATTT 7mer-m8 dme-miR-277-3p 2L + 821049 821185 3'utr Clp FlyBase G715.1 CCAGAGGTCGTAGGTTCCCAACTTCCGCAGGCGAACGTTTCAATCATTCTGTGTTTAAAGTGTATGTTAAGAAACTCATTTGCATTTTTGAAAAAAGTCCCTAGAACTGCCAGTAGAACGTATTGTGTTATCAGCGA 44 821128 0.987021857 8 41 359 0.920634921 1.462397998 0.349206349 0.318181818 0.523809524 44 4 1 58 2L:821049-821185 7 21 843 FBgn0015621 194.6666667 19.23666667 29.43666667 0.107876712 1.091665223 0.713395991 1 1 1 0.1 dme-miR-190-5p 6mer3-8 ACATAT 2L 8212070 8212075 - 2L_8212070_8212075_- 0.986602686 0.994340424 0.990471555 0.00547138 CG8372 FBtr0079634|FBtr0079633 8212037|8212037 8212118|8212118 2L - 8212043 8212099 3'utr CG8372 FlyBase G8924.1 TGCTATCAATGTACAAATCTATGTACATATGACGTCCAATAAAGGATTCATTCATTT 18 8212070 0.805226514 6 17 116 0.952380952 1.301029996 0 0.055555556 0.19047619 18 1 0 20 2L:8212043-8212099 6 CG8372 FBtr0079634|FBtr0079633 8212037|8212037 8212118|8212118 ACATAT 6mer3-8 dme-miR-190-5p 2L - 8212047 8212080 3'utr CG8372 FlyBase G6921.1 TATGTACATATGACGTCCAATAAAGGATTCATTC 11 8212070 0.951112993 3 11 61 1 1.204119983 0 0.454545455 0.625 11 0 0 16 2L:8212047-8212080 6 13 844 FBgn0032000 110.3333333 17.38 26.14666667 0.117824773 0.747986191 0.497195309 -5 -5 -5 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 2L 8218103 8218109 - 2L_8218103_8218109_- 0.620189692 0.620181599 0.620185645 5.73E-06 Snx6 FBtr0079631|FBtr0306170 8218069|8218069 8218410|8218410 2L - 8218050 8218194 3'utr Snx6 FlyBase G8936.1 GTTTTGTGAACAGAGCGCTTTTATATTTGTCAAACAAGCATTCCTCTCTACAGCATAAACTACAACTACATATATTGTAAACACTTGCATTTGAAGCAGAATATAAACGAGAAATATTGTACAGAAGGCTGGCTGTTTGTGAGCA 85 8218110 0.928082335 17 81 538 0.981481481 1.548184611 0.12962963 0.2 0.37037037 85 0 2 106 2L:8218050-8218194 7 Snx6 FBtr0079631|FBtr0306170 8218069|8218069 8218410|8218410 TGCATTT 7mer-m8 dme-miR-277-3p 2L - 8218059 8218150 3'utr Snx6 FlyBase G6935.1 TCTCTACAGCATAAACTACAACTACATATATTGTAAACACTTGCATTTGAAGCAGAATATAAACGAGAAATATTGTACAGAAGGCTGGCTGT 39 8218110 0.95960387 6 34 240 0.886792453 1.371067862 0.075471698 0.333333333 0.509433962 39 5 1 47 2L:8218059-8218150 7 35 845 FBgn0032005 1985.913333 134.4066667 205.9133333 0.017624133 0.26040375 0.169974423 1 1 1 0.1 dme-miR-318-3p 6mer2-7 CCAGTG 2L 824367 824372 - 2L_824367_824372_- 0.684465247 0.999786392 0.84212582 0.222965759 CG3862 FBtr0078038 824327 824432 2L - 824353 824419 3'utr CG3862 FlyBase G6664.1 TTTTAGATTAGTTAACTTAAAGTATACTCTAGTCGAAAATACTATTGCCAGTGGCAGCCCAACCAAT 30 824393 0.978085751 9 25 174 0.80952381 0.753327667 0.047619048 0.2 0.428571429 30 3 5 34 2L:824353-824419 6 CG3862 FBtr0078038 824327 824432 CCAGTG 6mer2-7 dme-miR-318-3p 2L - 824355 824412 3'utr CG3862 FlyBase G5212.1 TTAGTTAACTTAAAGTATACTCTAGTCGAAAATACTATTGCCAGTGGCAGCCCAACCA 14 824375 0.978881592 8 11 79 0.826086957 0.977723605 0 0.5 0.695652174 14 3 1 19 2L:824355-824412 6 7.5 846 FBgn0031286 219 17.47666667 26.73666667 0.034246575 0.42914362 0.280513652 21 3 12 0.1 dme-miR-7-5p 6mer3-8 GTCTTC 2L 8258679 8258684 - 2L_8258679_8258684_- 0.999902115 0.999997492 0.999949804 6.75E-05 Btk29A FBtr0112836 8258371 8260537 2L - 8258659 8258684 3'utr Btk29A FlyBase G8996.1 GTCTTCAAAGTGGCAGTGACATGTTG 28 8258674 0.74156704 3 22 143 0.806451613 0.795880017 0.838709677 0.107142857 0.193548387 28 3 3 25 2L:8258659-8258684 6 Btk29A FBtr0112836 8258371 8260537 GTCTTC 6mer3-8 dme-miR-7-5p 2L - 8258662 8258684 3'utr Btk29A FlyBase G6986.1 GTCTTCAAAGTGGCAGTGACATG 23 8258674 0.724213884 5 19 117 0.833333333 1.477121255 1 0.434782609 0.638888889 23 6 0 30 2L:8258662-8258684 6 25.5 847 FBgn0003502 699.44 22.40333333 34.31333333 0.036457738 1.138223479 0.74315135 -10 -10 -10 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2L 8259591 8259597 - 2L_8259591_8259597_- 0.808817892 0.808818826 0.808818359 6.36E-07 Btk29A FBtr0330693|FBtr0330693|FBtr0330692|FBtr0330692|FBtr0079618|FBtr0079618|FBtr0079615|FBtr0079615|FBtr0112835|FBtr0112835|FBtr0112836|FBtr0112836|FBtr0079617|FBtr0079617 8259503|8259503|8259503|8259503|8258753|8258753|8259503|8259503|8259503|8259503|8258371|8258371|8259503|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537 2L - 8259578 8259607 3'utr Btk29A FlyBase G8997.1 ATGAACGTTTTACTTAATTAATTTTATCAT 9 8259599 0.818557822 2 9 112 1 1.041392685 0.636363636 0.222222222 0.363636364 9 0 0 11 2L:8259578-8259607 7 Btk29A FBtr0112836|FBtr0112836|FBtr0079617|FBtr0079617|FBtr0079615|FBtr0079615|FBtr0112835|FBtr0112835|FBtr0079618|FBtr0079618|FBtr0330693|FBtr0330693|FBtr0330692|FBtr0330692 8258371|8258371|8259503|8259503|8259503|8259503|8259503|8259503|8258753|8258753|8259503|8259503|8259503|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2L - 8259580 8259608 3'utr Btk29A FlyBase G6987.1 TATGAACGTTTTACTTAATTAATTTTATC 7 8259599 0.725815484 3 6 82 0.888888889 0.903089987 0.333333333 0.285714286 0.444444444 7 1 0 8 2L:8259580-8259608 7 8 848 FBgn0003502 699.44 22.40333333 34.31333333 0.011437722 0.357089719 0.233145522 2 2 2 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 2L 8259816 8259822 - 2L_8259816_8259822_- 0.521222778 0.521223515 0.521223146 4.95E-07 Btk29A FBtr0330693|FBtr0330692|FBtr0079618|FBtr0079615|FBtr0112835|FBtr0112836|FBtr0079617 8259503|8259503|8258753|8259503|8259503|8258371|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537 2L - 8259790 8260037 3'utr Btk29A FlyBase G9000.1 GTGCTAAGTAAAATATGATTATCTCTAAAGAATGATAGAAACAAACAAACAAGAAAACTGATTATGCATTAAATATTAAATGTAAGCCTCAAGTCGAAAGCGAAATGTTTGCACAACTGATAAAGGATGAAGGAACCGAAGGATGATAAGAAAAGAGTTCGCCAAGAAACATAAACGATTTTTAGACTAGATTTGTACGTGCGTAGTTTAAGTTTTGTGATTTATTGTTTAATTCTTGCAGACGATTT 516 8259816 0.98641716 35 504 6584 0.968152866 1.938805539 0.643312102 0.158914729 0.308917197 516 14 6 608 2L:8259790-8260037 7 Btk29A FBtr0112836|FBtr0079617|FBtr0079615|FBtr0112835|FBtr0079618|FBtr0330693|FBtr0330692 8258371|8259503|8259503|8259503|8258753|8259503|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 8259778 8259865 3'utr Btk29A FlyBase G6988.1 AAACGATTTTTAGACTAGATTTGTACGTGCGTAGTTTAAGTTTTGTGATTTATTGTTTAATTCTTGCAGACGATTTTTATTTTTATTT 409 8259816 0.994162455 17 405 5327 0.988906498 2.318063335 0.703645008 0.393643032 0.606973059 409 5 2 624 2L:8259778-8259865 7 430.5 849 FBgn0003502 699.44 22.40333333 34.31333333 0.615492394 19.21589049 12.54614338 -6 -6 -6 0.1 dme-miR-277-3p 6mer3-8 TGCATT 2L 8260170 8260175 - 2L_8260170_8260175_- 0.992713413 0.993527835 0.993120624 0.000575868 Btk29A FBtr0330693|FBtr0330692|FBtr0079616|FBtr0079618|FBtr0079615|FBtr0112835|FBtr0112836|FBtr0079617 8259503|8259503|8260069|8258753|8259503|8259503|8258371|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537 2L - 8260134 8260233 3'utr Btk29A FlyBase G9001.1 ACGAAGCGCAACAACTGACAGTCACATATAGTAACTATATTAAATGAGAAAACGGAAATGCATTAAAGTATAGAGAACTGTAGTTAATAGTCAAATTTTT 57 8260171 0.938869596 10 55 223 0.984126984 1.792391689 0.349206349 0.105263158 0.19047619 57 1 0 62 2L:8260134-8260233 6 Btk29A FBtr0112836|FBtr0079617|FBtr0079615|FBtr0112835|FBtr0079616|FBtr0079618|FBtr0330693|FBtr0330692 8258371|8259503|8259503|8259503|8260069|8258753|8259503|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537 TGCATT 6mer3-8 dme-miR-277-3p 2L - 8260156 8260229 3'utr Btk29A FlyBase G6990.1 AGCGCAACAACTGACAGTCACATATAGTAACTATATTAAATGAGAAAACGGAAATGCATTAAAGTATAGAGAAC 48 8260171 0.961051709 5 41 189 0.855072464 1.469822016 0.275362319 0.333333333 0.536231884 48 9 1 59 2L:8260156-8260229 6 37.5 850 FBgn0003502 699.44 22.40333333 34.31333333 0.05361432 1.673858057 1.092869633 -4 -4 -4 0.1 dme-miR-283-5p 6mer3-8 TGATAT 2L 8260274 8260279 - 2L_8260274_8260279_- 0.999999286 0.999999867 0.999999576 4.24E-07 Btk29A FBtr0330693|FBtr0330692|FBtr0079616|FBtr0079618|FBtr0079615|FBtr0112835|FBtr0112836|FBtr0079617 8259503|8259503|8260069|8258753|8259503|8259503|8258371|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537 2L - 8260242 8260307 3'utr Btk29A FlyBase G9002.1 TTATATGATAGAGCTAGAGCTGAGCAAATGATATCATTATGTTTATGAACGCGTTAACTGTTAGAC 108 8260279 0.854810623 10 103 726 0.953488372 1.788875116 0.255813953 0.157407407 0.294573643 108 5 1 123 2L:8260242-8260307 6 Btk29A FBtr0112836|FBtr0079617|FBtr0079615|FBtr0112835|FBtr0079616|FBtr0079618|FBtr0330693|FBtr0330692 8258371|8259503|8259503|8259503|8260069|8258753|8259503|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537 TGATAT 6mer3-8 dme-miR-283-5p 2L - 8260258 8260311 3'utr Btk29A FlyBase G6991.1 TGGATTATATGATAGAGCTAGAGCTGAGCAAATGATATCATTATGTTTATGAAC 69 8260279 0.8334676 9 66 433 0.91588785 1.088136089 0.392523364 0.405797101 0.61682243 69 2 7 98 2L:8260258-8260311 6 80.5 851 FBgn0003502 699.44 22.40333333 34.31333333 0.115092074 3.593215295 2.346026812 0 0 0 0.1 dme-miR-276a-3p 7mer-A1 GTTCCTA 2L 8316765 8316771 + 2L_8316765_8316771_+ 0.671384915 0.690735344 0.681060129 0.013682799 CG7806 FBtr0079600 8316672 8317011 2L + 8316735 8316784 3'utr CG7806 FlyBase G3042.1 ATTACTTTGTTTAATTTTTATCATACTTGTGTTCCTAACTAACAATTCCA 80 8316761 0.775187002 6 79 830 0.979166667 1.496006599 0 0.175 0.3125 80 0 2 94 2L:8316735-8316784 7 CG7806 FBtr0079600 8316672 8317011 GTTCCTA 7mer-A1 dme-miR-276a-3p 2L + 8316736 8316782 3'utr CG7806 FlyBase G2399.1 TTACTTTGTTTAATTTTTATCATACTTGTGTTCCTAACTAACAATTC 54 8316761 0.947220572 5 52 531 0.972972973 1.857332496 0 0.277777778 0.472972973 54 2 0 72 2L:8316736-8316782 7 66.5 852 FBgn0032018 954.6066667 23.09666667 35.38666667 0.069662199 2.879203348 1.879238885 4 4 4 0.1 dme-miR-304-5p 8mer-A1 TGAGATTA 2L 8317181 8317188 - 2L_8317181_8317188_- 0.62484346 0.602977574 0.613910517 0.015461526 mtsh FBtr0301169 8316887 8317538 2L - 8317171 8317225 stop_codon mtsh FlyBase G9035.1 TTCAACTATGAAATCTAAGTGAAAAAGTATTGACGGTTGAGATTATCAACTGAAA 11 8317188 0.742529854 5 10 65 0.923076923 1.079181246 0 0.090909091 0.230769231 11 1 0 12 2L:8317171-8317225 8 mtsh FBtr0301169|FBtr0301170 8316887|8316887 8317538|8317207 TGAGATTA 8mer-A1 dme-miR-304-5p 2L - 8317171 8317264 stop_codon mtsh FlyBase G7016.1 CAGTTTGATCACATCATGGGCAGGCCAGGCGAAAAGCTCTTCAACTATGAAATCTAAGTGAAAAAGTATTGACGGTTGAGATTATCAACTGAAA 13 8317189 0.970752231 6 11 72 1 1.204119983 0.25 0.230769231 0.375 13 0 0 16 2L:8317171-8317264 8 5 853 FBgn0262598 6.67 0.32 0.476666667 0.749625187 15.625 10.48951049 0 1 0.5 0.1 dme-bantam-3p 7mer-m8 TGATCTC 2L 8317316 8317322 - 2L_8317316_8317322_- 0.661614968 0.661615064 0.661615016 7.07E-08 mtsh FBtr0301169 8316887 8317538 2L - 8317293 8317351 3'utr mtsh FlyBase G9036.1 TACACGGACGAGAACCTCCTCTACTACATTGATCTCTACGAGCGCTCTGTGAACGACAT 298 8317323 0.965429051 10 291 2147 0.973760933 2.222716471 0.049562682 0.127516779 0.241982507 298 8 1 334 2L:8317293-8317351 7 mtsh FBtr0301169 8316887 8317538 TGATCTC 7mer-m8 dme-bantam-3p 2L - 8317290 8317349 3'utr mtsh FlyBase G7017.1 CACGGACGAGAACCTCCTCTACTACATTGATCTCTACGAGCGCTCTGTGAACGACATGCT 180 8317323 0.840018044 10 173 1259 0.962199313 2.447158031 0.06185567 0.405555556 0.632302405 180 11 0 280 2L:8317290-8317349 7 229.5 854 FBgn0262598 6.67 0.32 0.476666667 34.4077961 717.1875 481.4685315 1 1 1 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 832022 832028 + 2L_832022_832028_+ 0.658999407 0.65899929 0.658999348 7.07E-08 dock FBtr0332973|FBtr0078013|FBtr0078014|FBtr0078015 831922|831922|831922|831922 832331|833241|833241|833241 2L + 831979 832091 3'utr dock FlyBase G911.1 AACACACATATGCAACACAAAGATATACCAAGGCTAACTTGTAGGCAGCTCAGCTCAGCGCGACGTGTAGTTCAATATAGTTCGGTTTGGATATTTAATTATGGACTCAGTTT 38 832019 0.850271694 9 37 216 0.975609756 1.602059991 0.268292683 0.078947368 0.146341463 38 1 0 40 2L:831979-832091 7 dock FBtr0332973|FBtr0078013|FBtr0078014|FBtr0078015 831922|831922|831922|831922 832331|833241|833241|833241 GGCAGCT 7mer-m8 dme-miR-980-3p 2L + 831974 832042 3'utr dock FlyBase G727.1 TCAACAACACACATATGCAACACAAAGATATACCAAGGCTAACTTGTAGGCAGCTCAGCTCAGCGCGAC 13 832019 0.958801057 5 13 62 1 1.301029996 0.2 0.538461538 0.7 13 0 0 20 2L:831974-832042 7 17 855 FBgn0010583 684.1466667 22.6 34.75 0.024848473 0.752212389 0.489208633 3 3 3 0.1 dme-miR-999-3p 6mer2-7 GTTAAC 2L 832231 832236 + 2L_832231_832236_+ 0.999800744 0.82448945 0.912145097 0.123963809 dock FBtr0332973|FBtr0078013|FBtr0078014|FBtr0078015 831922|831922|831922|831922 832331|833241|833241|833241 2L + 832198 832271 3'utr dock FlyBase G912.1 ACTAAATTAACGCTTAATTACCGCATTGGCTATGTTAACGAGGAACGAGAAACTCAAGAACTCATCATTGCATT 9 832223 0.967938735 5 8 50 0.909090909 1 0.181818182 0.222222222 0.363636364 9 1 0 10 2L:832198-832271 6 dock FBtr0332973|FBtr0078013|FBtr0078014|FBtr0078015 831922|831922|831922|831922 832331|833241|833241|833241 GTTAAC 6mer2-7 dme-miR-999-3p 2L + 832192 832247 3'utr dock FlyBase G728.1 GAATTAACTAAATTAACGCTTAATTACCGCATTGGCTATGTTAACGAGGAACGAGA 5 832224 0.982897718 4 5 34 1 0.84509804 0 0.4 0.571428571 5 0 0 7 2L:832192-832247 6 3 856 FBgn0010583 684.1466667 22.6 34.75 0.004385025 0.132743363 0.086330935 8 7 7.5 0.1 dme-miR-283-5p 6mer3-8 TGATAT 2L 832694 832699 + 2L_832694_832699_+ 0.999996332 1 0.999998166 2.62E-06 dock FBtr0078013|FBtr0078014|FBtr0078015 831922|831922|831922 833241|833241|833241 2L + 832675 832742 3'utr dock FlyBase G913.1 AAAACAAAACAAATACACTTGATATCTCCGCGCGGAGTCTGCTCCCCGCATTATTATAAACATAATCT 48 832694 0.861152199 7 46 247 0.966101695 1.755874856 0.084745763 0.229166667 0.372881356 48 2 0 57 2L:832675-832742 6 dock FBtr0078013|FBtr0078014|FBtr0078015 831922|831922|831922 833241|833241|833241 TGATAT 6mer3-8 dme-miR-283-5p 2L + 832675 832725 3'utr dock FlyBase G729.1 AAAACAAAACAAATACACTTGATATCTCCGCGCGGAGTCTGCTCCCCGCAT 27 832694 0.944894295 7 25 141 0.860465116 1.568201724 0.186046512 0.37037037 0.604651163 27 6 0 37 2L:832675-832725 6 30 857 FBgn0010583 684.1466667 22.6 34.75 0.043850247 1.327433628 0.863309353 0 0 0 0.1 dme-miR-980-5p 7mer-A1 AAAAACA 2L 833599 833605 - 2L_833599_833605_- 0.782911824 0.782911824 0.782911824 0 drongo FBtr0302121|FBtr0302612|FBtr0078037|FBtr0302120 833582|833582|833585|833582 834544|834544|834544|834544 2L - 833595 833656 3'utr drongo FlyBase G6668.1 TGTCAAACATTATCGAAGCCTTAAAGTTATTTAAAACTACGAAATTTCAATAAAAACAAATA 14 833635 0.736506047 9 14 91 1 1.278753601 0.210526316 0.214285714 0.421052632 14 0 0 19 2L:833595-833656 7 drongo FBtr0078037|FBtr0302120|FBtr0302121|FBtr0302612 833585|833582|833582|833582 834544|834544|834544|834544 AAAAACA 7mer-A1 dme-miR-980-5p 2L - 833600 833657 3'utr drongo FlyBase G5214.1 GTGTCAAACATTATCGAAGCCTTAAAGTTATTTAAAACTACGAAATTTCAATAAAAAC 14 833612 0.75494106 8 14 85 1 1.447158031 0.178571429 0.642857143 0.821428571 14 0 0 28 2L:833600-833657 5 4 858 FBgn0020304 1071.886667 39.91333333 61.24666667 0.003731738 0.100217137 0.065309677 30 7 18.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 833930 833935 - 2L_833930_833935_- 0.990420933 0.998045994 0.994233464 0.00539176 drongo FBtr0302121|FBtr0302612|FBtr0078037|FBtr0302120 833582|833582|833585|833582 834544|834544|834544|834544 2L - 833876 833976 3'utr drongo FlyBase G6671.1 AGACACAGTTAGTACAGATACAGATATACATATACGCTTTTGTACCTAATGAATTGCTTCTTGTTTCCATTGCTAATCATCTGCTTTTCGTGTGCTAATTT 430 833936 0.68117376 18 422 3683 0.980988593 2.411619706 0.053231939 0.181395349 0.330798479 430 9 1 516 2L:833876-833976 6 drongo FBtr0078037|FBtr0302120|FBtr0302121|FBtr0302612 833585|833582|833582|833582 834544|834544|834544|834544 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L - 833910 834018 3'utr drongo FlyBase G5217.1 TATAACGTACGACTATACATATACGGATACAGATACAGATTCAGACACAGTTAGTACAGATACAGATATACATATACGCTTTTGTACCTAATGAATTGCTTCTTGTTTC 293 833936 0.852298231 18 281 2332 0.972157773 2.145092768 0.053364269 0.348122867 0.556844548 293 10 2 419 2L:833910-834018 6 342 859 FBgn0020304 1071.886667 39.91333333 61.24666667 0.319063583 8.568565225 5.583977359 1 1 1 0.1 dme-bantam-3p 6mer3-8 TGATCT 2L 8378334 8378339 - 2L_8378334_8378339_- 0.999999955 0.999927762 0.999963859 5.11E-05 Aats-ala FBtr0079721|FBtr0079722 8378260|8378260 8378418|8378418 2L - 8378274 8378394 3'utr Aats-ala FlyBase G9076.1 AAGACCTTCAATTACTCACAATTTTGATACACAACTATGCTTAATCTTAATCCGTTGATCTGTTTTAAACAGCATTTCAGATGAATTTTTACGGCTATTTATAAAATAAAAGCATTTATAC 25 8378338 0.982779873 14 24 190 0.941176471 1.505149978 0.088235294 0.28 0.470588235 25 2 0 32 2L:8378274-8378394 6 Aats-ala FBtr0079722|FBtr0079721 8378260|8378260 8378418|8378418 TGATCT 6mer3-8 dme-bantam-3p 2L - 8378328 8378399 3'utr Aats-ala FlyBase G7040.1 GCGGCAAGACCTTCAATTACTCACAATTTTGATACACAACTATGCTTAATCTTAATCCGTTGATCTGTTTTA 13 8378369 0.984157154 7 13 103 1 1.278753601 0.210526316 0.307692308 0.526315789 13 0 0 19 2L:8378328-8378399 6 6 860 FBgn0027094 1216.56 46.45 71.26333333 0.004931939 0.129171152 0.084194771 -1 30 14.5 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 2L 8388308 8388314 + 2L_8388308_8388314_+ 0.521191862 0.521217283 0.521204572 1.80E-05 CG13384 FBtr0303469|FBtr0303468|FBtr0079655|FBtr0303470|FBtr0303467|FBtr0079658|FBtr0079653|FBtr0079657|FBtr0079654|FBtr0079656|FBtr0303471 8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134 8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804 2L + 8388119 8388333 stop_codon CG13384 FlyBase G3111.1 ACGACAGAACCCACTGAGTTTAATCGAAATAAGCGAATCGAAAACAGAACCTGGCTAGTTCTGCCTACAAATGTGTGCGAATTTATGACGAAGGCTTTATGTAGTTACACTCAGACTACGAATATGTTTACCATTAGTTGTTTACCATTTCCCAACTGGTATCGGTCCAGTCCAGTGGCGGTGCTTTAGTGTGATTAATTTATATTTATGGCAAA 396 8388304 0.959942088 39 386 2771 0.977505112 2.202306642 0.355828221 0.191919192 0.345603272 396 9 2 478 2L:8388119-8388333 7 CG13384 FBtr0303467|FBtr0079655|FBtr0303468|FBtr0303469|FBtr0303471|FBtr0303470|FBtr0079656|FBtr0079657|FBtr0079654|FBtr0079658|FBtr0079653 8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134 8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804 TGTGATT 7mer-m1 dme-miR-308-3p 2L + 8388267 8388329 3'utr CG13384 FlyBase G2454.2 TTCCCAACTGGTATCGGTCCAGTCCAGTGGCGGTGCTTTAGTGTGATTAATTTATATTTATGG 257 8388304 0.681702752 15 249 1796 0.97721519 2.10946605 0.432911392 0.373540856 0.592405063 257 7 2 386 2L:8388267-8388329 7 158 861 FBgn0032036 4208.186667 203.2133333 311 0.037545863 0.777508038 0.508038585 4 4 4 0.1 dme-miR-8-3p 6mer2-7 AGTATT 2L 8388494 8388499 + 2L_8388494_8388499_+ 0.99195549 0.995692605 0.993824048 0.002642529 CG13384 FBtr0303469|FBtr0303468|FBtr0079655|FBtr0303470|FBtr0303467|FBtr0079658|FBtr0079653|FBtr0079657|FBtr0079654|FBtr0079656|FBtr0303471 8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134 8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804 2L + 8388365 8388551 3'utr CG13384 FlyBase G3112.1 AGCTGCAATCGTACCAGACAATAACTAGCATTTTAAGTAGAAAGTTTTTCAACATTTGTTCAGTTTGTCAGTTGGAGATTATTTCTGTGTTAACTCGATGACCGCACAATGCCAAACGTGATTTTACGTAGTATTCTTAACTAAATTATTATTTAGCTTTTACTATGTAGTCTAGGTCGGGGCAGAT 262 8388487 0.84918916 35 241 2098 0.917491749 1.745074792 0.108910891 0.145038168 0.260726073 262 21 4 278 2L:8388365-8388551 6 CG13384 FBtr0303467|FBtr0079655|FBtr0303468|FBtr0303469|FBtr0303471|FBtr0303470|FBtr0079656|FBtr0079657|FBtr0079654|FBtr0079658|FBtr0079653 8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134 8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804 AGTATT 6mer2-7 dme-miR-8-3p 2L + 8388364 8388521 3'utr CG13384 FlyBase G2455.1 CAGCTGCAATCGTACCAGACAATAACTAGCATTTTAAGTAGAAAGTTTTTCAACATTTGTTCAGTTTGTCAGTTGGAGATTATTTCTGTGTTAACTCGATGACCGCACAATGCCAAACGTGATTTTACGTAGTATTCTTAACTAAATTATTATTTAGC 163 8388487 0.816031338 28 149 1260 0.91902834 1.753965866 0.149797571 0.404907975 0.607287449 163 17 3 227 2L:8388364-8388521 6 70.5 862 FBgn0032036 4208.186667 203.2133333 311 0.016753059 0.346926055 0.226688103 7 7 7 0.1 dme-miR-184-5p 6mer3-8 TGATAA 2L 8407982 8407987 + 2L_8407982_8407987_+ 0.999991983 0.998810045 0.999401014 0.0008358 emb FBtr0079663|FBtr0346708 8407923|8407923 8408853|8408280 2L + 8407914 8408016 stop_codon emb FlyBase G3150.1 AGGACGAATAGATGTCGATGTCGATGTCGATGTCACTGAGCTAGAATGTTTTAGTTGATGCTTGAGAATGATAAAAGGATGGTGATGTATGAGTGTTTCTCGA 28 8407993 0.982847339 12 25 189 0.9 1.431363764 0.233333333 0.071428571 0.133333333 28 3 0 27 2L:8407914-8408016 6 emb FBtr0079663|FBtr0346708 8407923|8407923 8408853|8408280 TGATAA 6mer3-8 dme-miR-184-5p 2L + 8407966 8408019 3'utr emb FlyBase G2490.1 AGTTGATGCTTGAGAATGATAAAAGGATGGTGATGTATGAGTGTTTCTCGAGCG 15 8407993 0.977319982 7 14 94 0.95 1.278753601 0.4 0.266666667 0.45 15 1 0 19 2L:8407966-8408019 6 16.5 863 FBgn0020497 2941.623333 79.20666667 121.6866667 0.005609148 0.208315798 0.135594149 -11 -11 -11 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 8412226 8412233 - 2L_8412226_8412233_- 0.500116882 0.500117383 0.500117132 3.54E-07 CG13398 FBtr0331990 8412142 8413550 2L - 8412158 8412255 3'utr CG13398 FlyBase G9111.1 ATGAATGTTCTTTCGTTTACATGTACTTAAAATCGCTGCTTAGTCGGCGGCATAAACTAAATTATTGTTAGTGTCTAAGACGAAATACGTGCAATAAA 207 8412234 0.989014861 8 201 1909 0.963855422 2.380211242 0.297188755 0.164251208 0.305220884 207 9 0 240 2L:8412158-8412255 8 CG13398 FBtr0331990 8412142 8413550 GTACTTAA 8mer-A1 dme-miR-252-5p 2L - 8412202 8412255 3'utr CG13398 FlyBase G7070.1 ATGAATGTTCTTTCGTTTACATGTACTTAAAATCGCTGCTTAGTCGGCGGCATA 164 8412234 0.813761594 5 149 1436 0.920704846 1.718086295 0.268722467 0.298780488 0.49339207 164 15 3 209 2L:8412202-8412255 8 183.5 864 FBgn0032042 445.3533333 18.47333333 28.30333333 0.412032394 9.933237099 6.483335296 1 1 1 0.1 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 8412354 8412360 - 2L_8412354_8412360_- 0.821283002 0.82129106 0.821287031 5.73E-06 CG13398 FBtr0331990 8412142 8413550 2L - 8412341 8412400 3'utr CG13398 FlyBase G9113.1 AAAAAAAAACAATGGTAGAAAGCATCGCGTTGCATTGTCCGCTGTGAGTTTATAATTTTT 35 8412365 0.98317773 8 31 285 0.909090909 1.602059991 0.295454545 0.257142857 0.409090909 35 4 0 40 2L:8412341-8412400 7 CG13398 FBtr0331990 8412142 8413550 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L - 8412281 8412383 3'utr CG13398 FlyBase G7071.1 GAAAGCATCGCGTTGCATTGTCCGCTGTGAGTTTATAATTTTTTACATATATATATCGCTGAATTGTTATTCAATTTGTTAGGAGTTATATACACTGAGCATT 23 8412365 0.979078631 11 21 203 0.864864865 1.505149978 0.27027027 0.434782609 0.648648649 23 5 0 32 2L:8412281-8412383 7 22.5 865 FBgn0032042 445.3533333 18.47333333 28.30333333 0.050521683 1.217971851 0.794959369 5 5 5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2L 8412803 8412809 - 2L_8412803_8412809_- 0.823348619 0.823309334 0.823328976 2.78E-05 CG13398 FBtr0079710|FBtr0331990 8412409|8412142 8413550|8413550 2L - 8412799 8412860 3'utr CG13398 FlyBase G9116.1 CGAATTTACTGCACGAGATTGTGGTAAAGTGAAATTTGAAGAGTGATTTGTCCAAAGATATG 13 8412812 0.988896323 5 10 88 0.846153846 0.740362689 0.615384615 0.083333333 0.153846154 12 1 1 11 2L:8412799-8412860 7 CG13398 FBtr0331990|FBtr0079710 8412142|8412409 8413550|8413550 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 8412799 8412859 3'utr CG13398 FlyBase G7073.1 GAATTTACTGCACGAGATTGTGGTAAAGTGAAATTTGAAGAGTGATTTGTCCAAAGATATG 13 8412813 0.864836602 5 12 83 1 1.380211242 0.333333333 0.461538462 0.708333333 13 0 0 24 2L:8412799-8412859 7 8 866 FBgn0032042 445.3533333 18.47333333 28.30333333 0.017963265 0.433056658 0.28265222 3 4 3.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 2L 8430817 8430822 + 2L_8430817_8430822_+ 0.555559365 0.505990692 0.530775028 0.035050364 Akap200 FBtr0079665|FBtr0340241|FBtr0079667|FBtr0340239|FBtr0340240|FBtr0079666 8430366|8430366|8430366|8430366|8430366|8430366 8430977|8430977|8430977|8430977|8431297|8430977 2L + 8430787 8430973 3'utr Akap200 FlyBase G3176.1 ACAAGCGCATACATACCATTCTCATATTGATGATCTTGATAGCGAAAGAATCAACAAATCATATACGATGAAATGATGAAAGTGAGGAGAATTTTTTGAATAATTTCTACTATACATTTAACTGTAAGTTCGAAGAAATTTGTAAAGAATTTTTGGACGAAATATTGGATAAAATATATATTATAAA 302 8430817 0.734427636 34 293 2478 0.970430108 2.080385947 0.301075269 0.195364238 0.346774194 302 9 2 361 2L:8430787-8430973 6 Akap200 FBtr0079667|FBtr0340241|FBtr0079665|FBtr0079666|FBtr0340240|FBtr0340239 8430366|8430366|8430366|8430366|8430366|8430366 8430977|8430977|8430977|8430977|8431297|8430977 TGATCT 6mer3-8 dme-bantam-3p 2L + 8430767 8430891 3'utr Akap200 FlyBase G2513.1 AAGCACACACCATCCACCACACAAGCGCATACATACCATTCTCATATTGATGATCTTGATAGCGAAAGAATCAACAAATCATATACGATGAAATGATGAAAGTGAGGAGAATTTTTTGAATAATT 181 8430817 0.987804543 18 168 1510 0.928030303 1.91204483 0.337121212 0.342541436 0.549242424 181 17 2 245 2L:8430767-8430891 6 203.5 867 FBgn0027932 6995.416667 397.1466667 611.3966667 0.029090476 0.512405157 0.332844471 0 0 0 0.1 dme-miR-283-5p 7mer-A1 GATATTA 2L 8434136 8434142 - 2L_8434136_8434142_- 0.716186384 0.782710333 0.749448359 0.047039501 D12 FBtr0079707 8434056 8434208 2L - 8434125 8434178 3'utr D12 FlyBase G9131.2 TTTATCAAGTCCGCGTCATAGTTCAAATTCTACTGGGATATTAGTTGATATCTA 26 8434160 0.79688726 8 23 210 0.931034483 1.431363764 0.103448276 0.115384615 0.206896552 26 2 0 27 2L:8434125-8434178 7 D12 FBtr0079707 8434056 8434208 GATATTA 7mer-A1 dme-miR-283-5p 2L - 8434127 8434176 3'utr D12 FlyBase G7082.1 TATCAAGTCCGCGTCATAGTTCAAATTCTACTGGGATATTAGTTGATATC 16 8434160 0.825125484 3 14 132 0.904761905 1.278753601 0.095238095 0.3125 0.476190476 16 2 0 19 2L:8434127-8434176 7 10.5 868 FBgn0027490 415.6666667 15.55333333 23.98666667 0.025260626 0.675096442 0.437743191 18 18 18 0.1 dme-miR-8-3p 6mer2-7 AGTATT 2L 8437951 8437956 + 2L_8437951_8437956_+ 0.999997379 0.999983987 0.999990683 9.48E-06 Chrac-14 FBtr0100268 8437890 8437996 2L + 8437910 8437966 3'utr Chrac-14 FlyBase G3178.1 ATACGGATCAATTATCCTCTTCAGTCATTAAGAACAAAGCTAGTATTGAGCATTAAC 15 8437929 0.69558085 6 15 107 1 1.397940009 0 0.266666667 0.56 15 0 0 25 2L:8437910-8437966 6 Chrac-14 FBtr0100268 8437890 8437996 AGTATT 6mer2-7 dme-miR-8-3p 2L + 8437917 8437967 3'utr Chrac-14 FlyBase G2515.1 TCAATTATCCTCTTCAGTCATTAAGAACAAAGCTAGTATTGAGCATTAACA 11 8437955 0.955922003 5 11 55 1 1.230448921 0 0.454545455 0.647058824 11 0 0 17 2L:8437917-8437967 6 7 869 FBgn0043002 655.4866667 147.0666667 225.6233333 0.010679088 0.047597461 0.03102516 22 -4 9 0.1 dme-miR-305-3p 6mer2-7 TGTGCC 2L 8446020 8446025 - 2L_8446020_8446025_- 0.999818124 0.999819918 0.999819021 1.27E-06 U26 FBtr0089673|FBtr0340244|FBtr0340243 8445859|8445859|8445928 8446091|8448279|8446091 2L - 8445970 8446055 3'utr U26 FlyBase G9138.1 AACTTGTTGCTTAGCAGTAAGATAGAAAAGTGTGCCTGATTAAATACATTAATTTACAGAGGAATACAGAATTTACTTGTATAACT 90 8446025 0.975840022 6 90 570 1 2.008600172 0.058823529 0.122222222 0.225490196 90 0 0 102 2L:8445970-8446055 6 U26 FBtr0340243|FBtr0089673|FBtr0340244 8445928|8445859|8445859 8446091|8446091|8448279 TGTGCC 6mer2-7 dme-miR-305-3p 2L - 8446001 8446048 3'utr U26 FlyBase G7085.1 TGCTTAGCAGTAAGATAGAAAAGTGTGCCTGATTAAATACATTAATTT 56 8446025 0.893205478 3 54 353 0.971830986 1.537819095 0.154929577 0.232142857 0.394366197 56 1 1 69 2L:8446001-8446048 6 70 870 FBgn0027780 159.9633333 5.64 8.636666667 0.437600283 12.41134752 8.104978773 0 0 0 0.1 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 8449759 8449766 - 2L_8449759_8449766_- 0.625363921 0.625363851 0.625363886 0 fu12 FBtr0079703|FBtr0302160|FBtr0079704|FBtr0340242 8449689|8449689|8449689|8449689 8450088|8450088|8450088|8450088 2L - 8449702 8449787 3'utr fu12 FlyBase G9139.1 TAAGCGCATTTGTTGGATGTTTAGCTTTATGCAAATATTGTATTGATTTATATGTGAATAATGAAATGAGACCTATTTAATAAAAC 60 8449767 0.79673289 15 59 543 0.977272727 1.934498451 0.136363636 0.3 0.522727273 60 2 0 86 2L:8449702-8449787 8 fu12 FBtr0079703|FBtr0302160|FBtr0079704|FBtr0340242 8449689|8449689|8449689|8449689 8450088|8450088|8450088|8450088 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 8449689 8449786 3'utr fu12 FlyBase G7086.1 AAGCGCATTTGTTGGATGTTTAGCTTTATGCAAATATTGTATTGATTTATATGTGAATAATGAAATGAGACCTATTTAATAAAACATTTTGCACTGAA 46 8449767 0.98977421 11 45 441 0.986842105 1.875061263 0.25 0.434782609 0.657894737 46 1 0 75 2L:8449689-8449786 8 40.5 871 FBgn0026718 82 6.056666667 9.28 0.493902439 6.68684645 4.364224138 1 1 1 0.1 dme-miR-79-3p 6mer2-7 AGCTTT 2L 8449836 8449841 - 2L_8449836_8449841_- 0.698653423 0.550856444 0.624754934 0.104508261 fu12 FBtr0079703|FBtr0302160|FBtr0079704|FBtr0340242 8449689|8449689|8449689|8449689 8450088|8450088|8450088|8450088 2L - 8449823 8449901 3'utr fu12 FlyBase G9140.1 GGGTGAATTTTCGATTAATATTAACTGTTTTACCTCCAGTACATGCATGTGTATGCCCAGAGCTTTTTTCGACTAAGCG 25 8449835 0.989636327 10 22 210 0.896551724 1.414973348 0.206896552 0.16 0.275862069 25 3 0 26 2L:8449823-8449901 6 fu12 FBtr0079703|FBtr0302160|FBtr0079704|FBtr0340242 8449689|8449689|8449689|8449689 8450088|8450088|8450088|8450088 AGCTTT 6mer2-7 dme-miR-79-3p 2L - 8449827 8449872 3'utr fu12 FlyBase G7087.1 TTACCTCCAGTACATGCATGTGTATGCCCAGAGCTTTTTTCGACTA 11 8449835 0.674708868 6 10 77 0.866666667 1.113943352 0.4 0.272727273 0.466666667 11 2 0 13 2L:8449827-8449872 6 13 872 FBgn0026718 82 6.056666667 9.28 0.158536585 2.146395157 1.400862069 -6 -6 -6 0.1 dme-miR-184-3p 7mer-m8 TCCGTCC 2L 8490388 8490394 + 2L_8490388_8490394_+ 0.661615243 0.661615243 0.661615243 0 CG13088 FBtr0079681 8490347 8490546 2L + 8490368 8490403 3'utr CG13088 FlyBase G3203.1 AAATGACATTTCTACCTCAATCCGTCCGGTATACGA 16 8490388 0.724762169 4 14 112 0.894736842 1.230448921 0 0.1875 0.315789474 16 2 0 17 2L:8490368-8490403 7 CG13088 FBtr0079681 8490347 8490546 TCCGTCC 7mer-m8 dme-miR-184-3p 2L + 8490367 8490400 3'utr CG13088 FlyBase G2532.1 TAAATGACATTTCTACCTCAATCCGTCCGGTATA 22 8490397 0.699608806 5 19 149 0.875 1.322219295 0 0.090909091 0.166666667 22 3 0 21 2L:8490367-8490400 7 19 873 FBgn0032047 48.33333333 4.033333333 6.113333333 0.393103448 4.710743802 3.107960742 0 -9 -4.5 0.1 dme-miR-932-5p 6mer3-8 GGAATT 2L 8512258 8512263 - 2L_8512258_8512263_- 0.496689693 0.571545511 0.534117602 0.052931044 CG13097 FBtr0079697 8512172 8512592 2L - 8512223 8512282 3'utr CG13097 FlyBase G9162.1 AGGCACGCGTGCAGCTTGCGGAATTTGACTATTCTTAGAATTATTTACTTAAAATAACTG 14 8512250 0.982134883 7 14 112 1 1.176091259 0.333333333 0.071428571 0.133333333 14 0 0 15 2L:8512223-8512282 6 CG13097 FBtr0079697 8512172 8512592 GGAATT 6mer3-8 dme-miR-932-5p 2L - 8512245 8512286 3'utr CG13097 FlyBase G7103.1 GATTAGGCACGCGTGCAGCTTGCGGAATTTGACTATTCTTAG 11 8512266 0.93218008 5 10 50 0.941176471 1.204119983 0.294117647 0.363636364 0.588235294 11 1 0 16 2L:8512245-8512286 6 11 874 FBgn0032051 1042.693333 50.99 78.90333333 0.010549602 0.215728574 0.139411094 -13 3 -5 0.1 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2L 8525625 8525630 - 2L_8525625_8525630_- 0.967398149 0.967603217 0.967500683 0.000145028 lmgB FBtr0333420|FBtr0112744 8524997|8525551 8526861|8526861 2L - 8525604 8525647 3'utr lmgB FlyBase G9171.1 AAATCCACACGATCATATTTGACTGTTCTTTATTTCGTTATCAT 13 8525629 0.951911594 5 13 139 1 1.255272505 0.111111111 0.384615385 0.555555556 13 0 0 18 2L:8525604-8525647 6 lmgB FBtr0333420|FBtr0112744 8524997|8525551 8526861|8526861 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2L - 8525617 8525639 3'utr lmgB FlyBase G7107.1 ACGATCATATTTGACTGTTCTTT 9 8525628 0.73741131 3 8 86 0.916666667 0.740362689 0.583333333 0.222222222 0.416666667 9 0 1 11 2L:8525617-8525639 6 11 875 FBgn0085470 298.48 19.26 29.45666667 0.036853391 0.57113188 0.373429897 -1 -2 -1.5 0.1 dme-miR-283-5p 7mer-m8 TGATATT 2L 8526651 8526657 - 2L_8526651_8526657_- 0.617273257 0.620203677 0.618738467 0.002072106 lmgB FBtr0112745|FBtr0333420|FBtr0112744|FBtr0336886 8526603|8524997|8525551|8526603 8526861|8526861|8526861|8526861 2L - 8526637 8526684 3'utr lmgB FlyBase G9173.1 ATAAAGCTTGCCATGGTCCCTCGTTCTTGATATTGAATCTCGAAACAT 9 8526651 0.98506544 4 9 68 1 1 0 0.111111111 0.2 9 0 0 10 2L:8526637-8526684 7 lmgB FBtr0112745|FBtr0333420|FBtr0112744|FBtr0336886 8526603|8524997|8525551|8526603 8526861|8526861|8526861|8526861 TGATATT 7mer-m8 dme-miR-283-5p 2L - 8526634 8526663 3'utr lmgB FlyBase G7110.1 CGTTCTTGATATTGAATCTCGAAACATATG 5 8526657 0.951963129 3 5 39 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 2L:8526634-8526663 7 6.5 876 FBgn0085470 298.48 19.26 29.45666667 0.021777003 0.33748702 0.220663121 -6 0 -3 0.1 dme-miR-263a-5p 6mer3-8 GTGCCA 2L 8537640 8537645 + 2L_8537640_8537645_+ 0.836236258 0.732794182 0.78451522 0.07314461 CG17834 FBtr0079689|FBtr0079688|FBtr0333418 8537596|8537596|8537596 8537932|8537932|8537932 2L + 8537619 8537662 3'utr CG17834 FlyBase G3213.1 CAATGGGTACTAGCAGTATTTGTGCCAAAGATTGAGGAACTCTC 12 8537639 0.689971482 4 12 77 1 1.146128036 0.5 0.083333333 0.214285714 12 0 0 14 2L:8537619-8537662 6 CG17834 FBtr0333418|FBtr0079688|FBtr0079689 8537596|8537596|8537596 8537932|8537932|8537932 GTGCCA 6mer3-8 dme-miR-263a-5p 2L + 8537620 8537661 3'utr CG17834 FlyBase G2538.1 AATGGGTACTAGCAGTATTTGTGCCAAAGATTGAGGAACTCT 7 8537639 0.98098198 3 7 51 1 1.146128036 0.5 0.428571429 0.714285714 7 0 0 14 2L:8537620-8537661 6 9.5 877 FBgn0028394 84 8.063333333 12.40666667 0.113095238 1.178172799 0.765717356 1 1 1 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 8537707 8537712 + 2L_8537707_8537712_+ 0.999989925 0.999561505 0.999775715 0.000302925 CG17834 FBtr0079689|FBtr0079688|FBtr0333418 8537596|8537596|8537596 8537932|8537932|8537932 2L + 8537691 8537743 3'utr CG17834 FlyBase G3214.1 GACCAATATCGCCAAAATGTGACTTAATATTATTAACTAATTAGCTGTAAGTG 12 8537708 0.907910897 5 12 97 1 1.146128036 0.214285714 0.166666667 0.285714286 12 0 0 14 2L:8537691-8537743 6 CG17834 FBtr0333418|FBtr0079688|FBtr0079689 8537596|8537596|8537596 8537932|8537932|8537932 ATGTGA 6mer3-8 dme-miR-1003-3p 2L + 8537695 8537728 3'utr CG17834 FlyBase G2539.1 AATATCGCCAAAATGTGACTTAATATTATTAACT 9 8537709 0.87117889 2 6 65 0.909090909 0.698970004 0.363636364 0.222222222 0.363636364 9 0 1 10 2L:8537695-8537728 6 8 878 FBgn0028394 84 8.063333333 12.40666667 0.095238095 0.992145515 0.644814616 -1 -2 -1.5 0.1 dme-miR-276a-3p 6mer3-8 AGTTCC 2L 862082 862087 - 2L_862082_862087_- 0.776267692 0.779944246 0.778105969 0.002599678 aru FBtr0078032|FBtr0078031|FBtr0078033 861847|861847|861847 862165|862165|862165 2L - 861897 862161 3'utr aru FlyBase G6694.1 GAGATGCGATCACCATATACATATACACATATTCCGTAGTGAGGATCTAGCGTTATAGAGAGACAGACATCAGCAGTTCCGTCTAGGATGCTAGTCCTGGTCACTAGCGATCGGATTGGCTCCAATACCTTGCACTCGCTCGCAGGAGTGTGCAAACCAGAACTAACCTTAAGACTAACCTAAGTGGAGCTCCAGACGGGAGCTGTTGAGCAGCACGTGGCTCCTGCTGAGGCGGATGCTTAAGCTGATGCTCATCCAGGCGAAA 719 862085 0.982393128 32 703 5384 0.976771196 2.924795996 0.153310105 0.139082058 0.281068525 719 20 0 841 2L:861897-862161 6 aru FBtr0078031|FBtr0078033|FBtr0078032 861847|861847|861847 862165|862165|862165 AGTTCC 6mer3-8 dme-miR-276a-3p 2L - 862057 862137 3'utr aru FlyBase G5238.1 ACACATATTCCGTAGTGAGGATCTAGCGTTATAGAGAGACAGACATCAGCAGTTCCGTCTAGGATGCTAGTCCTGGTCACT 337 862085 0.984327967 9 322 2562 0.958333333 2.102090526 0.170454545 0.362017804 0.59280303 337 19 3 506 2L:862057-862137 6 491 879 FBgn0029095 923.38 37.84 58.14666667 0.531742078 12.9756871 8.444164183 -2 -2 -2 0.1 dme-miR-14-3p 6mer2-7 AGACTG 2L 8668152 8668157 + 2L_8668152_8668157_+ 0.999999999 0.999999936 0.999999968 7.07E-08 Sema-1a FBtr0303878|FBtr0303879|FBtr0329931|FBtr0303877|FBtr0329932 8666210|8664168|8664168|8666210|8666034 8672041|8670014|8671917|8671917|8670014 2L + 8668134 8668174 3'utr Sema-1a FlyBase G3219.1 ACATAGGGTTTGTATTATAGACTGGACGAACGGAGGGCAGA 9 8668149 0.992450258 3 4 49 0.454545455 0.698970004 0.454545455 0.111111111 0.272727273 9 6 0 5 2L:8668134-8668174 6 Sema-1a FBtr0303877|FBtr0329931|FBtr0303879|FBtr0303878|FBtr0329932 8666210|8664168|8664168|8666210|8666034 8671917|8671917|8670014|8672041|8670014 AGACTG 6mer2-7 dme-miR-14-3p 2L + 8668138 8668162 3'utr Sema-1a FlyBase G2545.1 AGGGTTTGTATTATAGACTGGACGA 5 8668149 0.729059413 2 4 32 0.857142857 0.77815125 0 0.2 0.428571429 5 1 0 6 2L:8668138-8668162 6 5.5 880 FBgn0011259 295.3333333 4.256666667 6.55 0.018623025 1.292090838 0.839694656 3 3 3 0.1 dme-miR-12-5p 7mer-A1 ATACTCA 2L 8668261 8668267 + 2L_8668261_8668267_+ 0.823349052 0.823349172 0.823349112 7.07E-08 Sema-1a FBtr0303878|FBtr0303879|FBtr0329931|FBtr0303877|FBtr0329932 8666210|8664168|8664168|8666210|8666034 8672041|8670014|8671917|8671917|8670014 2L + 8668202 8668285 3'utr Sema-1a FlyBase G3220.1 GGGGCATTGCTAATGTTGTTCTCATATTAAAGTATATTAGAAATAGGATAAGCTAATTGATACTCAATATTTTGTATGAGAAAC 22 8668259 0.990017337 5 21 208 0.96 1.380211242 0.12 0.090909091 0.2 22 1 0 24 2L:8668202-8668285 7 Sema-1a FBtr0303877|FBtr0329931|FBtr0303879|FBtr0303878|FBtr0329932 8666210|8664168|8664168|8666210|8666034 8671917|8671917|8670014|8672041|8670014 ATACTCA 7mer-A1 dme-miR-12-5p 2L + 8668202 8668282 3'utr Sema-1a FlyBase G2546.1 GGGGCATTGCTAATGTTGTTCTCATATTAAAGTATATTAGAAATAGGATAAGCTAATTGATACTCAATATTTTGTATGAGA 15 8668259 0.987158117 5 14 122 0.952380952 1.301029996 0.142857143 0.333333333 0.523809524 15 1 0 20 2L:8668202-8668282 7 16 881 FBgn0011259 295.3333333 4.256666667 6.55 0.054176072 3.75880971 2.442748092 2 2 2 0.1 dme-bantam-3p 6mer2-7 GATCTC 2L 8684963 8684968 - 2L_8684963_8684968_- 0.999998795 0.907794786 0.953896791 0.065198074 PrBP FBtr0079750 8684821 8685347 2L - 8684946 8685017 3'utr PrBP FlyBase G9185.1 TAAAAATAGCTGCCGAACATTGTGTCATTTGAGATAAATTGTATCTATAGATCTCTGTACCAGTTGTAACCA 18 8684962 0.987377212 7 16 149 0.944444444 1.230448921 0.444444444 0 0 18 1 0 17 2L:8684946-8685017 6 PrBP FBtr0079750 8684821 8685347 GATCTC 6mer2-7 dme-bantam-3p 2L - 8684946 8684990 3'utr PrBP FlyBase G7119.1 TTTGAGATAAATTGTATCTATAGATCTCTGTACCAGTTGTAACCA 6 8684962 0.990315832 2 5 58 0.75 0.77815125 0.25 0.333333333 0.5 6 2 0 6 2L:8684946-8684990 6 11 882 FBgn0032059 209.34 22.80333333 34.73333333 0.052546097 0.482385616 0.316698656 -6 -6 -6 0.1 dme-miR-307a-3p 6mer3-8 GGTTGT 2L 8685274 8685279 - 2L_8685274_8685279_- 1 1 1 0 PrBP FBtr0079750 8684821 8685347 2L - 8685151 8685320 3'utr PrBP FlyBase G9186.1 TGATCGACCAGGTGTTCTCGCGTCCACCCACAAGTTTTTTTGGTTGTTCTTCAAGATGTTCTCTACAAAACATGCATACTTCGCTTTTGAGTACTTCAGCATTTCAATGCAATTGTTTGCGCGTTTATGAACTAGTTGTAGTCCAATGCATTTTAATCTAATCTAATTTT 52 8685263 0.977960038 23 51 475 0.983606557 1.77815125 0.262295082 0.173076923 0.295081967 52 1 0 60 2L:8685151-8685320 6 PrBP FBtr0079750 8684821 8685347 GGTTGT 6mer3-8 dme-miR-307a-3p 2L - 8685163 8685289 3'utr PrBP FlyBase G7120.1 AAGTTTTTTTGGTTGTTCTTCAAGATGTTCTCTACAAAACATGCATACTTCGCTTTTGAGTACTTCAGCATTTCAATGCAATTGTTTGCGCGTTTATGAACTAGTTGTAGTCCAATGCATTTTAATC 36 8685280 0.812420349 14 34 338 0.96 1.681241237 0.14 0.305555556 0.5 36 2 0 48 2L:8685163-8685289 6 17 883 FBgn0032059 209.34 22.80333333 34.73333333 0.081207605 0.745505043 0.489443378 -16 1 -7.5 0.1 dme-miR-970-3p 6mer2-7 CTTATG 2L 8710198 8710203 - 2L_8710198_8710203_- 0.766346716 0.999491971 0.882919344 0.164858623 raw FBtr0340231|FBtr0303868|FBtr0079746|FBtr0340232|FBtr0079745 8709878|8709878|8709878|8709878|8709878 8710434|8710434|8710434|8710434|8710434 2L - 8710156 8710253 3'utr raw FlyBase G9209.1 CAAGTGTAAAACCACTAAAATGTCGTCGCCCAGAGAGCGCATTTCATAACCTTATGGAGAAAGTCTTGCATTCAGCTCCACTCTCTCTATGATCGCTA 12 8710232 0.961323484 7 12 63 1 1.176091259 0.266666667 0.25 0.4 12 0 0 15 2L:8710156-8710253 6 raw FBtr0340232|FBtr0079745|FBtr0303868|FBtr0079746|FBtr0340231 8709878|8709878|8709878|8709878|8709878 8710434|8710434|8710434|8710434|8710434 CTTATG 6mer2-7 dme-miR-970-3p 2L - 8710185 8710243 3'utr raw FlyBase G7143.1 ACCACTAAAATGTCGTCGCCCAGAGAGCGCATTTCATAACCTTATGGAGAAAGTCTTGC 5 8710200 0.970116399 3 5 28 1 1.113943352 0 0.6 0.846153846 5 0 0 13 2L:8710185-8710243 6 3.5 884 FBgn0003209 722.0533333 20.74666667 31.84333333 0.004847287 0.168701799 0.109913116 29 -3 13 0.1 dme-miR-276a-3p 6mer3-8 AGTTCC 2L 8710413 8710418 - 2L_8710413_8710418_- 0.999999989 0.999999996 0.999999993 0 raw FBtr0340231|FBtr0303868|FBtr0079746|FBtr0340232|FBtr0079745 8709878|8709878|8709878|8709878|8709878 8710434|8710434|8710434|8710434|8710434 2L - 8710398 8710458 stop_codon raw FlyBase G9211.1 TACAACAACCGCGACCGCTGCTAAATCGTACCTGTATTTAAGTTCCAGCACGTGACAATTT 70 8710423 0.985328005 10 65 537 0.933333333 1.84509804 0.293333333 0.057142857 0.12 70 5 0 70 2L:8710398-8710458 6 raw FBtr0340232|FBtr0079745|FBtr0303868|FBtr0079746|FBtr0340231 8709878|8709878|8709878|8709878|8709878 8710434|8710434|8710434|8710434|8710434 AGTTCC 6mer3-8 dme-miR-276a-3p 2L - 8710394 8710457 stop_codon raw FlyBase G7144.1 ACAACAACCGCGACCGCTGCTAAATCGTACCTGTATTTAAGTTCCAGCACGTGACAATTTAAGC 41 8710422 0.986824969 9 37 318 0.815384615 1.72427587 0.153846154 0.390243902 0.615384615 41 12 0 53 2L:8710394-8710457 6 8.5 885 FBgn0003209 722.0533333 20.74666667 31.84333333 0.011771984 0.40970437 0.266931854 5 4 4.5 0.1 dme-miR-14-3p 7mer-m8 AAGACTG 2L 876828 876834 + 2L_876828_876834_+ 0.671583261 0.671581132 0.671582196 1.56E-06 PNUTS FBtr0091489|FBtr0332000 876736|876736 877038|877038 2L + 876801 876854 3'utr PNUTS FlyBase G935.3 AGATTTCCGAAATCGAGTCCCCACATGAAGACTGTATCCAGGTTAGCCGCCGCA 328 876826 0.890271768 7 319 1537 0.9765625 2.096910013 0.111979167 0.131097561 0.2578125 328 7 2 375 2L:876801-876854 7 PNUTS FBtr0332000|FBtr0091489 876736|876736 877038|877038 AAGACTG 7mer-m8 dme-miR-14-3p 2L + 876736 876876 stop_codon PNUTS FlyBase G753.1 AGGACCTACCCGAATCTTCTGCGGAAGATTCAGCTGCATAGATCTCAGACGCGCAACGGAGGCCAAGATTTCCGAAATCGAGTCCCCACATGAAGACTGTATCCAGGTTAGCCGCCGCAAGTTAATCTAAGTGTATATATG 197 876826 0.960188933 16 181 895 0.932659933 1.965358514 0.131313131 0.355329949 0.572390572 197 18 2 277 2L:876736-876876 7 247.5 886 FBgn0053526 1548.73 47.96666667 73.53 0.159808359 5.159833218 3.365973072 2 2 2 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 8829076 8829082 + 2L_8829076_8829082_+ 0.80197026 0.801970239 0.80197025 7.07E-08 SoxN FBtr0330210|FBtr0330210|FBtr0330210|FBtr0079733|FBtr0079733|FBtr0079733 8828778|8828778|8828778|8828211|8828211|8828211 8829670|8829670|8829670|8829670|8829670|8829670 2L + 8828888 8829143 3'utr SoxN FlyBase G3269.1 TCGAATTTCGAAGTGGCAGAGTAACACATGCGCATATAAATAAATGAGAATAGGATTAATGTTTAGTCATTTAAATGATGCATACGCACTGTTGTACCACAATAGTAAGATGACAACTCACTTGCATTCCATACCGTTCTGCTTCGATTTCCCTTGATTTCCCGCTTGTTGCATAGCTAAAACAATTGTGTGATACAAATAAACTGTTGCCAATTACGGGGACAACGGCAACAACAACAAATTCGTTTGGTTTAGC 161 8829074 0.974663391 25 153 954 0.954773869 1.579783597 0.070351759 0.180124224 0.336683417 161 5 4 190 2L:8828888-8829143 7 SoxN FBtr0330210|FBtr0330210|FBtr0330210|FBtr0079733|FBtr0079733|FBtr0079733 8828778|8828778|8828778|8828211|8828211|8828211 8829670|8829670|8829670|8829670|8829670|8829670 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 8829032 8829122 3'utr SoxN FlyBase G2583.3 CGATTTCCCTTGATTTCCCGCTTGTTGCATAGCTAAAACAATTGTGTGATACAAATAAACTGTTGCCAATTACGGGGACAACGGCAACAAC 68 8829074 0.969964895 8 64 382 0.969072165 1.973127854 0.020618557 0.323529412 0.525773196 68 3 0 94 2L:8829032-8829122 7 84.5 887 FBgn0029123 4.333333333 0.126666667 0.19 19.5 667.1052632 444.7368421 2 2 2 0.1 dme-miR-970-3p 7mer-m8 TCTTATG 2L 8829333 8829339 + 2L_8829333_8829339_+ 0.65168737 0.654535477 0.653111423 0.002013911 SoxN FBtr0330210|FBtr0079733 8828778|8828211 8829670|8829670 2L + 8829221 8829355 3'utr SoxN FlyBase G3271.1 GACGCGGAATCAAGCACAAGTTTAGTAGGAGTAAAGGCAGTTGTGGCGAGGCGATGAAAATATTTCAGAAAAGCAAAGAAAAATGTCAAAAAACATTCTATTTTATAAATTCTCTTATGCATTAAGTAATTATAA 42 8829335 0.990102542 11 40 382 0.943396226 1.698970004 0.245283019 0.238095238 0.396226415 42 3 0 50 2L:8829221-8829355 7 SoxN FBtr0330210|FBtr0079733 8828778|8828211 8829670|8829670 TCTTATG 7mer-m8 dme-miR-970-3p 2L + 8829315 8829349 3'utr SoxN FlyBase G2585.1 ATTCTATTTTATAAATTCTCTTATGCATTAAGTAA 24 8829335 0.757241616 3 24 249 1 1.544068044 0.314285714 0.333333333 0.542857143 24 0 0 35 2L:8829315-8829349 7 28 888 FBgn0029123 4.333333333 0.126666667 0.19 6.461538462 221.0526316 147.3684211 -2 -2 -2 0.1 dme-miR-965-3p 6mer2-7 ACGCTT 2L 8933405 8933410 + 2L_8933405_8933410_+ 0.927566306 0.978750115 0.953158211 0.036192412 CG34398 FBtr0303889|FBtr0112649 8933083|8933083 8933594|8933537 2L + 8933393 8933429 3'utr CG34398 FlyBase G3279.1 AAATGGAAACACACGCTTTGGCATTGCACTCGAAATT 9 8933412 0.674167385 3 7 43 0.833333333 1 0 0.333333333 0.5 9 2 0 10 2L:8933393-8933429 6 CG34398 FBtr0303889|FBtr0112649 8933083|8933083 8933594|8933537 ACGCTT 6mer2-7 dme-miR-965-3p 2L + 8933393 8933425 3'utr CG34398 FlyBase G2591.1 AAATGGAAACACACGCTTTGGCATTGCACTCGA 10 8933411 0.63869363 4 10 45 1 1.230448921 0.352941176 0.3 0.588235294 10 0 0 17 2L:8933393-8933425 6 8.5 889 FBgn0085427 21 0.376666667 0.593333333 0.404761905 22.56637168 14.3258427 -7 -6 -6.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 2L 8953627 8953632 - 2L_8953627_8953632_- 0.962387172 0.964441725 0.963414448 0.001452751 CG31886 FBtr0079787|FBtr0113029|FBtr0303885 8953479|8953479|8953479 8954021|8954021|8954021 2L - 8953513 8953806 3'utr CG31886 FlyBase G9261.1 GAATGTAGCCTAAGACGCAAGCATTTTTTGGTCTACAAATGAAAATGGGAAAATAGTAAGATAAAATATGTAAATTGTATATCGTGTACAAATAAATGTAGATACCAAGTAATTTTAAGATGAAATTGTAGTACTTATCAATTAATTCAATTATTCTCATTTTATAAACGACTTTGATCTTTTTGTTTACCTGAACACATTTTAAAGACAATTCTTATGTAGTCATTTGAAGAGGATTAGTTTTAATGCTTTTGTTGACTTTGTATAAGTGATTTGAATTTTAAGGAAATTTTC 969 8953624 0.831691 75 931 9074 0.963288109 1.905616011 0.106145251 0.226006192 0.401436552 969 32 14 1207 2L:8953513-8953806 6 CG31886 FBtr0303885|FBtr0113029|FBtr0079787 8953479|8953479|8953479 8954021|8954021|8954021 TGATCT 6mer3-8 dme-bantam-3p 2L - 8953513 8953805 3'utr CG31886 FlyBase G7179.1 AATGTAGCCTAAGACGCAAGCATTTTTTGGTCTACAAATGAAAATGGGAAAATAGTAAGATAAAATATGTAAATTGTATATCGTGTACAAATAAATGTAGATACCAAGTAATTTTAAGATGAAATTGTAGTACTTATCAATTAATTCAATTATTCTCATTTTATAAACGACTTTGATCTTTTTGTTTACCTGAACACATTTTAAAGACAATTCTTATGTAGTCATTTGAAGAGGATTAGTTTTAATGCTTTTGTTGACTTTGTATAAGTGATTTGAATTTTAAGGAAATTTTC 741 8953623 0.817424036 78 711 7034 0.960637301 1.96933118 0.11715089 0.326585695 0.532333646 741 32 10 1025 2L:8953513-8953805 6 526 890 FBgn0032079 1123.893333 53.47 82.11333333 0.468015945 9.837291939 6.405780628 -8 -9 -8.5 0.1 dme-miR-190-5p 6mer2-7 CATATC 2L 8953877 8953882 - 2L_8953877_8953882_- 0.868900857 0.995775551 0.932338204 0.089713961 CG31886 FBtr0079787|FBtr0113029|FBtr0303885 8953479|8953479|8953479 8954021|8954021|8954021 2L - 8953817 8954242 stop_codon CG31886 FlyBase G9262.1 TGAGCGAGTCACAAAGCTGTCTGAATACCACAAATTGCACATTCAACATCAGTTTCCTTTCGGATGAGATTGTGGTGGTGGAGGTTCCAACACGGGATGGTATCGAGCACGAGGAGGACGATATAACCAATCTGATCTCCACCTGTCATCCGCGCAGCGAGATATACGCCATCTTTCCCATTACGGTGCTGGTGCTGATCCTTTGCTGCTCCTTCCTGTAGTCCTCCTGATCCAATATTATTAATATACTATTGTGATATTTATGGTGAGGTAACTACCGGGTGATATACTCGCTTGTGAGTGTGTTAACGTTATGGCCGGCCCCAAAACGAGAGCTTTTAAAATAGCCATAGAATATTCCATATCGGTTATACACACACGGAATGAACAGTCTGAACAAATCGTTATCAATATTCGTAGATTTTA 1821 8953871 0.91527203 90 1600 12129 0.883221477 1.181403796 0.13064877 0.190005491 0.340044743 1821 132 129 1974 2L:8953817-8954242 6 CG31886 FBtr0303885|FBtr0113029|FBtr0079787 8953479|8953479|8953479 8954021|8954021|8954021 CATATC 6mer2-7 dme-miR-190-5p 2L - 8953820 8954077 stop_codon CG31886 FlyBase G7180.1 ACGCCATCTTTCCCATTACGGTGCTGGTGCTGATCCTTTGCTGCTCCTTCCTGTAGTCCTCCTGATCCAATATTATTAATATACTATTGTGATATTTATGGTGAGGTAACTACCGGGTGATATACTCGCTTGTGAGTGTGTTAACGTTATGGCCGGCCCCAAAACGAGAGCTTTTAAAATAGCCATAGAATATTCCATATCGGTTATACACACACGGAATGAACAGTCTGAACAAATCGTTATCAATATTCGTAGATT 1327 8953871 0.918283761 55 1155 8475 0.878654971 1.301753217 0.153021442 0.39412208 0.608187135 1327 160 89 1803 2L:8953820-8954077 6 374.5 891 FBgn0032079 1123.893333 53.47 82.11333333 0.333216675 7.003927436 4.560769668 -11 -11 -11 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 2L 8970040 8970046 + 2L_8970040_8970046_+ 0.732781098 0.610870511 0.671825805 0.086203812 CG18088 FBtr0332187|FBtr0079759 8970025|8970025 8970627|8970259 2L + 8970028 8970072 3'utr CG18088 FlyBase G3294.1 TAAGTCTCTTATGTACAAAATAAAGTTTAAGTTTAGTTTAAAACT 48 8970038 0.679852743 7 43 378 0.893939394 1.16879202 0.045454545 0.3125 0.5 48 4 3 59 2L:8970028-8970072 7 CG18088 FBtr0079759|FBtr0332187 8970025|8970025 8970259|8970627 GTACAAA 7mer-A1 dme-miR-305-5p 2L + 8970029 8970060 3'utr CG18088 FlyBase G2604.1 AAGTCTCTTATGTACAAAATAAAGTTTAAGTT 14 8970037 0.657229584 3 12 100 0.857142857 0.77815125 0.19047619 0.428571429 0.619047619 14 1 2 18 2L:8970029-8970060 7 30.5 892 FBgn0032082 216 12.59666667 19.19 0.141203704 2.42127547 1.589369463 2 3 2.5 0.1 dme-miR-8-3p 6mer2-7 AGTATT 2L 8977904 8977909 - 2L_8977904_8977909_- 0.999776418 0.999941522 0.99985897 0.000116743 CG13101 FBtr0079784 8977832 8978041 2L - 8977855 8977924 3'utr CG13101 FlyBase G9274.1 AAATTCGTTCTGCGGAGTATTGTTGCTTAACGGCATTTGAAGGTAAAACCCGGTCTATGTCCTTCGGCGG 12 8977904 0.988786317 7 12 110 1 1.113943352 0.153846154 0.083333333 0.153846154 12 0 0 13 2L:8977855-8977924 6 CG13101 FBtr0079784 8977832 8978041 AGTATT 6mer2-7 dme-miR-8-3p 2L - 8977857 8977924 3'utr CG13101 FlyBase G7194.1 AAATTCGTTCTGCGGAGTATTGTTGCTTAACGGCATTTGAAGGTAAAACCCGGTCTATGTCCTTCGGC 9 8977903 0.987188654 7 9 79 1 1.176091259 0.066666667 0.333333333 0.6 9 0 0 15 2L:8977857-8977924 6 8 893 FBgn0032084 10 0.853333333 1.306666667 0.8 9.375 6.12244898 -5 -6 -5.5 0.1 dme-miR-932-5p 7mer-m8 GGAATTG 2L 8986006 8986012 - 2L_8986006_8986012_- 0.702952786 0.702972265 0.702962525 1.38E-05 rost FBtr0079782|FBtr0331454|FBtr0331453 8985934|8985934|8985934 8986340|8986340|8986340 2L - 8985971 8986023 3'utr rost FlyBase G9283.1 AAAAGAATAATGGAATTGTATTAAAATATATCACGAATATCAAAAGTGGAAAG 11 8986013 0.985048824 3 10 80 0.916666667 1.041392685 0.166666667 0.090909091 0.166666667 11 1 0 11 2L:8985971-8986023 7 rost FBtr0079782|FBtr0331454|FBtr0331453 8985934|8985934|8985934 8986340|8986340|8986340 GGAATTG 7mer-m8 dme-miR-932-5p 2L - 8985978 8986023 3'utr rost FlyBase G7201.1 AAAAGAATAATGGAATTGTATTAAAATATATCACGAATATCAAAAG 11 8986013 0.984349602 3 9 69 0.875 1.146128036 0.0625 0.272727273 0.5 11 2 0 14 2L:8985978-8986023 7 9 894 FBgn0011705 1154.336667 95.13666667 145.5366667 0.007796686 0.09460075 0.061840086 1 1 1 0.1 dme-miR-276a-3p 6mer2-7 GTTCCT 2L 8986140 8986145 - 2L_8986140_8986145_- 0.999999974 0.944424075 0.972212025 0.039298096 rost FBtr0079782|FBtr0331454|FBtr0331453 8985934|8985934|8985934 8986340|8986340|8986340 2L - 8986035 8986328 3'utr rost FlyBase G9284.1 AACAAAAAGTCATTGAATATCACCTCATGGGCACCCGCACGTATACCATGTTCTTATATGCATTGCCAGCATTATGTAACTCCCATTAACAAATCCATCCAAAAACGACACTGAAAAGGGAGTCGCACACTTGCATGCATTTATTTATATCTAGTATTTCATATTGTAAGTTTTAATCATTTGGTTCCTTAACATTGAATTGGTTTAGTTAGGTTAATTCTTATACATTATGTTGTTATTACATATTTGGTTTAAATAGTATAAATATGAAATTTGTTGAAAATACTCTACCCA 154 8986147 0.985070251 38 140 1141 0.91160221 1.916453949 0.116022099 0.149350649 0.276243094 154 15 1 165 2L:8986035-8986328 6 rost FBtr0079782|FBtr0331454|FBtr0331453 8985934|8985934|8985934 8986340|8986340|8986340 GTTCCT 6mer2-7 dme-miR-276a-3p 2L - 8986108 8986166 3'utr rost FlyBase G7202.1 ATTGTAAGTTTTAATCATTTGGTTCCTTAACATTGAATTGGTTTAGTTAGGTTAATTCT 23 8986147 0.982498722 5 18 216 0.891891892 1.51851394 0 0.545454545 0.72972973 22 4 0 33 2L:8986108-8986166 6 27 895 FBgn0011705 1154.336667 95.13666667 145.5366667 0.023390057 0.283802249 0.185520258 2 2 2 0.1 dme-miR-980-5p 6mer2-7 AAAAAC 2L 8986223 8986228 - 2L_8986223_8986228_- 0.996518419 0.805016639 0.900767529 0.135412221 rost FBtr0079782|FBtr0331454|FBtr0331453 8985934|8985934|8985934 8986340|8986340|8986340 2L - 8986035 8986328 3'utr rost FlyBase G9284.1 AACAAAAAGTCATTGAATATCACCTCATGGGCACCCGCACGTATACCATGTTCTTATATGCATTGCCAGCATTATGTAACTCCCATTAACAAATCCATCCAAAAACGACACTGAAAAGGGAGTCGCACACTTGCATGCATTTATTTATATCTAGTATTTCATATTGTAAGTTTTAATCATTTGGTTCCTTAACATTGAATTGGTTTAGTTAGGTTAATTCTTATACATTATGTTGTTATTACATATTTGGTTTAAATAGTATAAATATGAAATTTGTTGAAAATACTCTACCCA 154 8986243 0.985070251 38 140 1141 0.91160221 1.916453949 0.116022099 0.149350649 0.276243094 154 15 1 165 2L:8986035-8986328 6 rost FBtr0079782|FBtr0331454|FBtr0331453 8985934|8985934|8985934 8986340|8986340|8986340 AAAAAC 6mer2-7 dme-miR-980-5p 2L - 8986173 8986326 3'utr rost FlyBase G7202.2 CAAAAAGTCATTGAATATCACCTCATGGGCACCCGCACGTATACCATGTTCTTATATGCATTGCCAGCATTATGTAACTCCCATTAACAAATCCATCCAAAAACGACACTGAAAAGGGAGTCGCACACTTGCATGCATTTATTTATATCTAGTA 65 8986243 0.956647018 18 58 361 0.897959184 1.643452676 0.010204082 0.353846154 0.571428571 65 9 1 88 2L:8986173-8986326 6 36.5 896 FBgn0011705 1154.336667 95.13666667 145.5366667 0.031619891 0.383658596 0.250795905 15 15 15 0.1 dme-miR-79-3p 7mer-A1 AGCTTTA 2L 9163658 9163664 + 2L_9163658_9163664_+ 0.822454694 0.822314153 0.822384423 9.93E-05 CG32982 FBtr0110960|FBtr0301039|FBtr0330218|FBtr0079771|FBtr0303888|FBtr0301040|FBtr0330219 9163162|9163162|9163463|9163448|9163448|9163162|9163448 9163721|9163721|9163721|9163716|9163721|9163721|9163721 2L + 9163627 9163663 3'utr CG32982 FlyBase G3309.1 TAGTACTCGTAGTGTGTGTGCTCCAATGTCCAGCTTT 14 9163645 0.690710413 5 13 99 0.933333333 0.84509804 0.066666667 0.071428571 0.133333333 14 0 1 14 2L:9163627-9163663 6 CG32982 FBtr0079771|FBtr0330218|FBtr0301039|FBtr0110960|FBtr0330219|FBtr0301040|FBtr0303888 9163448|9163463|9163162|9163162|9163448|9163162|9163448 9163716|9163721|9163721|9163721|9163721|9163721|9163721 AGCTTTA 7mer-A1 dme-miR-79-3p 2L + 9163617 9163679 3'utr CG32982 FlyBase G2609.1 AACTATGTAGTAGTACTCGTAGTGTGTGTGCTCCAATGTCCAGCTTTATGTAAATGTTTAAAT 13 9163644 0.977906816 6 12 115 0.947368421 1.255272505 0.052631579 0.384615385 0.578947368 13 1 0 18 2L:9163617-9163679 7 6.5 897 FBgn0052982 930.23 36.84 56.35333333 0.006987519 0.176438654 0.115343665 13 14 13.5 0.1 dme-miR-31a-5p 6mer3-8 TCTTGC 2L 9245858 9245863 + 2L_9245858_9245863_+ 0.920344387 0.907006692 0.913675539 0.009431178 tai FBtr0333405|FBtr0303872|FBtr0303871|FBtr0303873|FBtr0304974|FBtr0303870 9245807|9245807|9245807|9245807|9245807|9245807 9247186|9247186|9247186|9250211|9250211|9247186 2L + 9245819 9245897 3'utr tai FlyBase G3332.1 CCTAGTTCAGAACCAAGGATCACGTACAACCAAAACTTCTCTTGCGCACGCATTTATGGCTCTAGATACGAAAAACAAT 26 9245874 0.975721882 12 25 157 0.96969697 1.204119983 0.060606061 0.115384615 0.303030303 26 0 1 32 2L:9245819-9245897 6 tai FBtr0304974|FBtr0303870|FBtr0303871|FBtr0303873|FBtr0333405|FBtr0303872 9245807|9245807|9245807|9245807|9245807|9245807 9250211|9247186|9247186|9250211|9247186|9247186 TCTTGC 6mer3-8 dme-miR-31a-5p 2L + 9245832 9245885 3'utr tai FlyBase G2628.1 CAAGGATCACGTACAACCAAAACTTCTCTTGCGCACGCATTTATGGCTCTAGAT 12 9245860 0.970394221 6 12 70 1 1.255272505 0.222222222 0.333333333 0.555555556 12 0 0 18 2L:9245832-9245885 6 14.5 898 FBgn0041092 2562.806667 37.60666667 57.55666667 0.005657859 0.385569934 0.251925639 -16 -2 -9 0.1 dme-miR-33-5p 6mer2-7 AATGCA 2L 9246138 9246143 + 2L_9246138_9246143_+ 0.536577148 0.999999442 0.768288295 0.327689051 tai FBtr0333405|FBtr0303872|FBtr0303871|FBtr0303873|FBtr0304974|FBtr0303870 9245807|9245807|9245807|9245807|9245807|9245807 9247186|9247186|9247186|9250211|9250211|9247186 2L + 9246102 9246187 3'utr tai FlyBase G3334.1 AATAACTTCATAAGAAGATGCAAACATGATATAAGTAATGCATATTTATTACGTTTAAAGATAAAGCCTAGTACTAAGAGCTATAT 10 9246120 0.964742244 6 9 55 0.909090909 0.698970004 0.454545455 0.1 0.181818182 10 0 1 10 2L:9246102-9246187 6 tai FBtr0304974|FBtr0303870|FBtr0303871|FBtr0303873|FBtr0333405|FBtr0303872 9245807|9245807|9245807|9245807|9245807|9245807 9250211|9247186|9247186|9250211|9247186|9247186 AATGCA 6mer2-7 dme-miR-33-5p 2L + 9246105 9246198 3'utr tai FlyBase G2630.1 AACTTCATAAGAAGATGCAAACATGATATAAGTAATGCATATTTATTACGTTTAAAGATAAAGCCTAGTACTAAGAGCTATATATACAAAAGAA 11 9246150 0.977625164 8 11 73 1 1.176091259 0.133333333 0.363636364 0.533333333 11 0 0 15 2L:9246105-9246198 6 4.5 899 FBgn0041092 2562.806667 37.60666667 57.55666667 0.001755887 0.119659635 0.078183819 18 -12 3 0.1 dme-miR-980-3p 6mer3-8 GGCAGC 2L 9246338 9246343 + 2L_9246338_9246343_+ 0.527063306 0.729222603 0.628142954 0.142948212 tai FBtr0333405|FBtr0303872|FBtr0303871|FBtr0303873|FBtr0304974|FBtr0303870 9245807|9245807|9245807|9245807|9245807|9245807 9247186|9247186|9247186|9250211|9250211|9247186 2L + 9246307 9246361 3'utr tai FlyBase G3336.1 ATTGCATAACATTTGGAGAGGCGTTGGCAACGGCAGCAGTTGGCTAAGCTCTAGA 18 9246347 0.777235798 6 18 85 1 1.380211242 0.458333333 0.333333333 0.5 18 0 0 24 2L:9246307-9246361 6 tai FBtr0304974|FBtr0303870|FBtr0303871|FBtr0303873|FBtr0333405|FBtr0303872 9245807|9245807|9245807|9245807|9245807|9245807 9250211|9247186|9247186|9250211|9247186|9247186 GGCAGC 6mer3-8 dme-miR-980-3p 2L + 9246317 9246354 3'utr tai FlyBase G2632.1 ATTTGGAGAGGCGTTGGCAACGGCAGCAGTTGGCTAAG 9 9246346 0.786546009 3 8 35 0.909090909 1 0.909090909 0.222222222 0.363636364 9 1 0 10 2L:9246317-9246354 6 11 900 FBgn0041092 2562.806667 37.60666667 57.55666667 0.004292169 0.29250133 0.191116002 -9 -8 -8.5 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 9246846 9246851 + 2L_9246846_9246851_+ 0.999999653 0.999999958 0.999999805 2.12E-07 tai FBtr0333405|FBtr0303872|FBtr0303871|FBtr0303873|FBtr0304974|FBtr0303870 9245807|9245807|9245807|9245807|9245807|9245807 9247186|9247186|9247186|9250211|9250211|9247186 2L + 9246808 9246874 3'utr tai FlyBase G3340.1 AAGCAAAGCGCGCAAAGCAAAGTTGGCGTTGCAATTTCATGTGAAGGCTATTTTACAGGTTTTGTTT 94 9246849 0.988618154 11 92 856 0.974358974 1.579783597 0.051282051 0.180851064 0.341880342 94 1 2 114 2L:9246808-9246874 6 tai FBtr0304974|FBtr0303870|FBtr0303871|FBtr0303873|FBtr0333405|FBtr0303872 9245807|9245807|9245807|9245807|9245807|9245807 9250211|9247186|9247186|9250211|9247186|9247186 ATGTGA 6mer3-8 dme-miR-1003-3p 2L + 9246822 9246871 3'utr tai FlyBase G2635.1 AAGCAAAGTTGGCGTTGCAATTTCATGTGAAGGCTATTTTACAGGTTTTG 47 9246849 0.843664743 7 47 435 1 1.832508913 0.073529412 0.340425532 0.544117647 47 0 0 68 2L:9246822-9246871 6 68 901 FBgn0041092 2562.806667 37.60666667 57.55666667 0.02653341 1.808190037 1.181444374 -3 -3 -3 0.1 dme-bantam-3p 6mer3-8 TGATCT 2L 9331906 9331911 + 2L_9331906_9331911_+ 0.696558021 0.559847136 0.628202578 0.096669204 Cks30A FBtr0079799 9331350 9331981 2L + 9331816 9331928 3'utr Cks30A FlyBase G3348.1 ATTTTATCATACTTTATGTTGCCATTTCGAAACGGAAGCGAAAAGAAGAATTTTGCTCACTTCTTTTAAGCTTAAATGAAATCTGATTTGTGATCTTGAAATTTTTAATCAAT 198 9331902 0.89813824 16 190 1752 0.965779468 1.705863712 0.326996198 0.247474747 0.433460076 198 5 4 254 2L:9331816-9331928 6 Cks30A FBtr0079799 9331350 9331981 TGATCT 6mer3-8 dme-bantam-3p 2L + 9331880 9331925 3'utr Cks30A FlyBase G2643.1 TTTAAGCTTAAATGAAATCTGATTTGTGATCTTGAAATTTTTAATC 140 9331902 0.68933827 7 135 1233 0.961722488 2.303196057 0.320574163 0.35 0.564593301 140 8 0 201 2L:9331880-9331925 6 160 902 FBgn0010314 382.0366667 41.23 63.10666667 0.418807968 3.880669415 2.535389816 4 4 4 0.1 dme-miR-252-5p 6mer3-8 GTACTT 2L 9435065 9435070 + 2L_9435065_9435070_+ 0.961911414 0.566205491 0.764058453 0.279806325 scat FBtr0079809 9434914 9435341 2L + 9435059 9435124 3'utr scat FlyBase G3370.1 TTGCTTGTACTTTTATGTTCCGCCCTATAGCAAAAGGAAATTGGAAATGTATCTCTTTTGTTGCGC 158 9435076 0.826056999 9 155 1365 0.984293194 2.274157849 0.32460733 0.202531646 0.340314136 158 3 0 188 2L:9435059-9435124 6 scat FBtr0079809 9434914 9435341 GTACTT 6mer3-8 dme-miR-252-5p 2L + 9435059 9435123 3'utr scat FlyBase G2668.1 TTGCTTGTACTTTTATGTTCCGCCCTATAGCAAAAGGAAATTGGAAATGTATCTCTTTTGTTGCG 89 9435076 0.767710828 11 85 790 0.968 2.08278537 0.288 0.303370787 0.504 89 4 0 121 2L:9435059-9435123 6 83.5 903 FBgn0011232 207.99 7.106666667 10.93333333 0.401461609 11.74953096 7.637195122 -11 -11 -11 0.1 dme-miR-970-3p 7mer-A1 CTTATGA 2L 9435161 9435167 + 2L_9435161_9435167_+ 0.809851893 0.815523274 0.812687583 0.004010285 scat FBtr0079809 9434914 9435341 2L + 9435140 9435171 3'utr scat FlyBase G3371.1 AAGCTTAAAGTCGATGGAAGGCTTATGATTAA 14 9435154 0.915402481 3 14 91 1 1.146128036 0.142857143 0 0 14 0 0 14 2L:9435140-9435171 7 scat FBtr0079809 9434914 9435341 CTTATGA 7mer-A1 dme-miR-970-3p 2L + 9435140 9435172 3'utr scat FlyBase G2669.1 AAGCTTAAAGTCGATGGAAGGCTTATGATTAAA 13 9435154 0.912953137 3 13 85 1 1.230448921 0.235294118 0.153846154 0.352941176 13 0 0 17 2L:9435140-9435172 7 13.5 904 FBgn0011232 207.99 7.106666667 10.93333333 0.064906967 1.899624765 1.234756098 7 7 7 0.1 dme-miR-8-3p 7mer-A1 AGTATTA 2L 9435242 9435248 + 2L_9435242_9435248_+ 0.821512139 0.82334374 0.822427939 0.001295137 scat FBtr0079809 9434914 9435341 2L + 9435200 9435266 3'utr scat FlyBase G3372.1 TGCGTACAAATCAATGGCGGTAAACGATTCCCTTGTTCCTTTAGTATTATTATCGTTAGCTGGATTT 46 9435240 0.92517206 10 46 453 1 1.73239376 0.314814815 0.173913043 0.296296296 46 0 0 54 2L:9435200-9435266 7 scat FBtr0079809 9434914 9435341 AGTATTA 7mer-A1 dme-miR-8-3p 2L + 9435183 9435261 3'utr scat FlyBase G2670.1 TAATCAACAAATTTCAATGCGTACAAATCAATGGCGGTAAACGATTCCCTTGTTCCTTTAGTATTATTATCGTTAGCTG 27 9435240 0.989730428 8 26 253 1 1.653212514 0.244444444 0.555555556 0.733333333 27 0 0 45 2L:9435183-9435261 7 30 905 FBgn0011232 207.99 7.106666667 10.93333333 0.144237704 4.221388368 2.743902439 2 2 2 0.1 dme-miR-965-3p 7mer-m8 TACGCTT 2L 9491617 9491623 - 2L_9491617_9491623_- 0.620173681 0.620158176 0.620165929 1.10E-05 Gdi FBtr0306169|FBtr0345433 9491174|9491174 9492083|9492083 2L - 9491590 9491638 3'utr Gdi FlyBase G9312.1 AGTCAGTCAGACGATTACGCTTGGACTTTAGTTGTACGAGTATATAATA 47 9491624 0.887719025 6 46 352 0.980769231 1.40654018 0.057692308 0.106382979 0.192307692 47 0 1 51 2L:9491590-9491638 7 Gdi FBtr0345433|FBtr0306169 9491174|9491174 9492083|9492083 TACGCTT 7mer-m8 dme-miR-965-3p 2L - 9491598 9491636 3'utr Gdi FlyBase G7222.1 TCAGTCAGACGATTACGCTTGGACTTTAGTTGTACGAGT 28 9491624 0.889160597 4 28 217 1 1.612783857 0.073170732 0.392857143 0.585365854 28 0 0 41 2L:9491598-9491636 7 37 906 FBgn0004868 1474.943333 78.36666667 119.7266667 0.02508571 0.472139515 0.309037252 1 1 1 0.1 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 2L 9492052 9492057 - 2L_9492052_9492057_- 0.78940557 0.959236629 0.874321099 0.120088652 Gdi FBtr0306169|FBtr0345433|FBtr0079862 9491174|9491174|9491934 9492083|9492083|9492083 2L - 9491957 9492073 3'utr Gdi FlyBase G9313.1 AGGCCTCATCTGGTTATGGTGCATTTGGACAGCTCAACATCAGCCACAAACATCGTAGATCGTCTCAGCGTCGTGGCCAAACCTTAAAAAAAAAAATACCCAAGATAAGAAAACCCA 48 9492049 0.98541852 13 48 228 1 1.72427587 0.113207547 0.104166667 0.188679245 48 0 0 53 2L:9491957-9492073 6 Gdi FBtr0345433|FBtr0079862|FBtr0306169 9491174|9491934|9491174 9492083|9492083|9492083 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 2L - 9492036 9492096 stop_codon Gdi FlyBase G7224.1 CGAGGAGCAGTAAACGGGAATGAAGGCCTCATCTGGTTATGGTGCATTTGGACAGCTCAAC 9 9492054 0.974722863 5 8 51 1 1.204119983 0.3125 0.555555556 0.75 9 0 0 16 2L:9492036-9492096 6 17.5 907 FBgn0004868 1474.943333 78.36666667 119.7266667 0.011864863 0.22330923 0.146166268 -8 -3 -5.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 2L 9519762 9519768 + 2L_9519762_9519768_+ 0.823348392 0.823349493 0.823348943 7.78E-07 CG33298 FBtr0089854|FBtr0301065|FBtr0301064 9519753|9519753|9519753 9520696|9520696|9520696 2L + 9519743 9519815 stop_codon CG33298 FlyBase G3404.1 ATCAGATTATAACAACGATTACCTGATTAAGCGCCAAAATGCAATTCTTCGGCTATCTCAGCGGCAACTAAAA 59 9519769 0.653021631 10 56 306 0.957746479 1.531478917 0.112676056 0.152542373 0.295774648 59 2 1 68 2L:9519743-9519815 7 CG33298 FBtr0301064|FBtr0301065|FBtr0089854 9519753|9519753|9519753 9520696|9520696|9520696 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2L + 9519726 9519808 stop_codon CG33298 FlyBase G2690.1 CGATTATGGGTCTAAGAATCAGATTATAACAACGATTACCTGATTAAGCGCCAAAATGCAATTCTTCGGCTATCTCAGCGGCA 35 9519769 0.967301194 6 32 174 0.903846154 1.672097858 0.134615385 0.4 0.596153846 35 5 0 47 2L:9519726-9519808 7 39.5 908 FBgn0032120 1173.196667 22.66 34.66333333 0.033668694 1.743159753 1.139532647 -7 -7 -7 0.1 dme-miR-184-5p 6mer3-8 TGATAA 2L 9519895 9519900 + 2L_9519895_9519900_+ 0.997966605 0.500135606 0.749051105 0.352019676 CG33298 FBtr0089854|FBtr0301065|FBtr0089853|FBtr0301064 9519753|9519753|9519767|9519753 9520696|9520696|9520696|9520696 2L + 9519829 9519904 3'utr CG33298 FlyBase G3405.1 TAGCAACCCCCAAAACTTGTACACATGTGCTTTCGCTCTTAATATGTGGCCTTCGACACCGATTATTGATAATATT 20 9519891 0.983592534 8 19 151 1 1.431363764 0.111111111 0.25 0.444444444 20 0 0 27 2L:9519829-9519904 6 CG33298 FBtr0301064|FBtr0089853|FBtr0301065|FBtr0089854 9519753|9519767|9519753|9519753 9520696|9520696|9520696|9520696 TGATAA 6mer3-8 dme-miR-184-5p 2L + 9519842 9519903 3'utr CG33298 FlyBase G2691.1 AACTTGTACACATGTGCTTTCGCTCTTAATATGTGGCCTTCGACACCGATTATTGATAATAT 23 9519881 0.72833523 12 23 169 1 1.568201724 0 0.434782609 0.648648649 23 0 0 37 2L:9519842-9519903 6 8 909 FBgn0032120 1173.196667 22.66 34.66333333 0.006818976 0.353045013 0.230791422 4 14 9 0.1 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 9520288 9520294 + 2L_9520288_9520294_+ 0.764429807 0.758887145 0.761658476 0.003919281 CG33298 FBtr0089854|FBtr0301065|FBtr0089853|FBtr0301064 9519753|9519753|9519767|9519753 9520696|9520696|9520696|9520696 2L + 9520103 9520333 3'utr CG33298 FlyBase G3407.2 ACTAGGGAGCCAGAAGTGCTCGAGAATTGAACCCAACCTAACCGACTATTGTTAAATAGAAGCGAAAATGCAATGCTTATTTATGTGTACGATTATTTAAACTAGCGACTAATAGATGTATCACCCTAACAGAAATACTTGACAATTCAAACACAACAGAACTCCATTGCGAGTTCGATGATAAGGCTGTGATTCTACACTCATGAAGGATATACCTAAGCATATGATATA 667 9520284 0.872483124 32 627 5108 0.941634241 2.161966616 0.029831388 0.142428786 0.258106355 667 41 4 726 2L:9520103-9520333 7 CG33298 FBtr0301064|FBtr0089853|FBtr0301065|FBtr0089854 9519753|9519767|9519753|9519753 9520696|9520696|9520696|9520696 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L + 9520200 9520334 3'utr CG33298 FlyBase G2694.1 TAAACTAGCGACTAATAGATGTATCACCCTAACAGAAATACTTGACAATTCAAACACAACAGAACTCCATTGCGAGTTCGATGATAAGGCTGTGATTCTACACTCATGAAGGATATACCTAAGCATATGATATAT 441 9520283 0.813376428 19 414 3437 0.939882698 2.329736775 0.021994135 0.392290249 0.607038123 441 39 2 641 2L:9520200-9520334 7 510.5 910 FBgn0032120 1173.196667 22.66 34.66333333 0.435135911 22.52868491 14.72737763 4 5 4.5 0.1 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 9539238 9539244 + 2L_9539238_9539244_+ 0.820100995 0.820022779 0.820061887 5.53E-05 Oatp30B FBtr0079825|FBtr0079826|FBtr0079828|FBtr0079827 9538653|9538653|9538653|9538653 9540060|9540060|9540060|9540045 2L + 9539212 9539257 3'utr Oatp30B FlyBase G3412.1 ATTTAACCATTGTCAATGGAAATTGTGCTGTGAAACAATTTGTGAG 201 9539235 0.727564593 5 195 1097 0.977011494 1.62838893 0.011494253 0.23880597 0.413793103 201 1 5 255 2L:9539212-9539257 7 Oatp30B FBtr0079827|FBtr0079828|FBtr0079826|FBtr0079825 9538653|9538653|9538653|9538653 9540045|9540060|9540060|9540060 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L + 9539213 9539260 3'utr Oatp30B FlyBase G2697.1 TTTAACCATTGTCAATGGAAATTGTGCTGTGAAACAATTTGTGAGTAT 155 9539235 0.719439841 5 154 833 0.995594714 2.354108439 0 0.35483871 0.559471366 155 1 0 226 2L:9539213-9539260 7 177.5 911 FBgn0032123 86 1.96 2.986666667 2.063953488 90.56122449 59.43080357 3 3 3 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG 2L 9549156 9549161 - 2L_9549156_9549161_- 0.999606486 0.999498436 0.999552461 7.64E-05 jp FBtr0079861|FBtr0113030|FBtr0304057|FBtr0304056|FBtr0079860 9548256|9548256|9548256|9549012|9547718 9549578|9549578|9549578|9549578|9549578 2L - 9549147 9549183 3'utr jp FlyBase G9323.1 AAATACATACTTAAATCGCGTGGCTGTGCAGCCAATC 25 9549163 0.829425424 2 23 116 0.939393939 1.491361694 0 0.2 0.393939394 25 2 0 31 2L:9549147-9549183 6 jp FBtr0304057|FBtr0304056|FBtr0079861|FBtr0113030|FBtr0079860 9548256|9549012|9548256|9548256|9547718 9549578|9549578|9549578|9549578|9549578 GCTGTG 6mer2-7 dme-miR-1008-3p 2L - 9549148 9549176 3'utr jp FlyBase G7235.1 TACTTAAATCGCGTGGCTGTGCAGCCAAT 12 9549163 0.811238097 2 12 52 1 1.278753601 0 0.5 0.684210526 12 0 0 19 2L:9549148-9549176 6 18.5 912 FBgn0032129 7.333333333 0.28 0.416666667 2.522727273 66.07142857 44.4 2 2 2 0.1 dme-miR-2a-2-5p 7mer-m8 TGATGAG 2L 9549370 9549376 - 2L_9549370_9549376_- 0.658676043 0.524686108 0.591681075 0.094745167 jp FBtr0079861|FBtr0113030|FBtr0304057|FBtr0304056|FBtr0079860 9548256|9548256|9548256|9549012|9547718 9549578|9549578|9549578|9549578|9549578 2L - 9549358 9549395 3'utr jp FlyBase G9324.1 AAGTTTTTAGCATTTGCAGTGATGAGTTGATATAAAGC 6 9549382 0.629858196 4 6 52 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 2L:9549358-9549395 7 jp FBtr0304057|FBtr0304056|FBtr0079861|FBtr0113030|FBtr0079860 9548256|9549012|9548256|9548256|9547718 9549578|9549578|9549578|9549578|9549578 TGATGAG 7mer-m8 dme-miR-2a-2-5p 2L - 9549346 9549395 3'utr jp FlyBase G7237.1 AAGTTTTTAGCATTTGCAGTGATGAGTTGATATAAAGCAGAACTTATATA 8 9549382 0.979965384 7 8 60 1 1.204119983 0.0625 0.375 0.6875 8 0 0 16 2L:9549346-9549395 7 6.5 913 FBgn0032129 7.333333333 0.28 0.416666667 0.886363636 23.21428571 15.6 6 6 6 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 2L 9573472 9573478 + 2L_9573472_9573478_+ 0.782897782 0.782902027 0.782899904 2.97E-06 CG3838 FBtr0079835|FBtr0079834 9572964|9572964 9573572|9573572 2L + 9573414 9573485 3'utr CG3838 FlyBase G3419.1 TGTTAGTTTAAGGACACTGTATATACGCTGCTATTGAAACCTAAACTATAGAATCTGTGTACAAATGAATTT 21 9573447 0.976981402 6 20 138 0.962962963 1.414973348 0 0.238095238 0.407407407 21 1 0 26 2L:9573414-9573485 7 CG3838 FBtr0079835|FBtr0079834 9572964|9572964 9573572|9573572 GTACAAA 7mer-A1 dme-miR-305-5p 2L + 9573424 9573484 3'utr CG3838 FlyBase G2703.1 AGGACACTGTATATACGCTGCTATTGAAACCTAAACTATAGAATCTGTGTACAAATGAATT 10 9573468 0.981415008 7 9 59 0.875 0.669006781 0.0625 0.3 0.5625 10 0 2 14 2L:9573424-9573484 7 7 914 FBgn0032130 513.3333333 25.81 39.59333333 0.013636364 0.271212708 0.176797441 25 4 14.5 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG 2L 9573534 9573539 + 2L_9573534_9573539_+ 1 1 1 0 CG3838 FBtr0079835|FBtr0079834 9572964|9572964 9573572|9573572 2L + 9573509 9573552 3'utr CG3838 FlyBase G3420.1 TAAAGAGATAGATCGATATCAAACTGCTGTGTGTAATAATAAAC 17 9573540 0.967257934 5 16 120 0.954545455 1.322219295 0.045454545 0.235294118 0.409090909 17 1 0 21 2L:9573509-9573552 6 CG3838 FBtr0079835|FBtr0079834 9572964|9572964 9573572|9573572 GCTGTG 6mer2-7 dme-miR-1008-3p 2L + 9573517 9573553 3'utr CG3838 FlyBase G2704.1 TAGATCGATATCAAACTGCTGTGTGTAATAATAAACA 8 9573540 0.672032578 3 7 58 0.9 0.954242509 0 0.25 0.4 8 1 0 9 2L:9573517-9573553 6 12.5 915 FBgn0032130 513.3333333 25.81 39.59333333 0.024350649 0.484308408 0.315709715 -6 -6 -6 0.1 dme-miR-184-3p 6mer2-7 CCGTCC 2L 9615705 9615710 + 2L_9615705_9615710_+ 0.999998149 0.999999968 0.999999058 1.34E-06 Trx-2 FBtr0079839|FBtr0079840 9615680|9615680 9616404|9616047 2L + 9615577 9615781 stop_codon Trx-2 FlyBase G3425.1 TCCAGCATGCCCACCTTCGTGTTCCTCAAGAACGGCGTCAAGGTCGAAGAGTTCGCCGGAGCCAACGCCAAGCGTCTGGAGGATGTCATCAAGGCCAATATCTAAGTGGGCAGCGCATAGACGTCTGGCCGTCCCCCTGATCCACCTATGAGTTTTCTTCATAACATTTAGTTAATTAATTAATTCCATAAGTGCAGGGTTTTGC 90 9615702 0.980793021 26 83 594 0.923076923 1.380211242 0.230769231 0.155555556 0.269230769 90 5 3 96 2L:9615577-9615781 6 Trx-2 FBtr0079840|FBtr0079839 9615680|9615680 9616047|9616404 CCGTCC 6mer2-7 dme-miR-184-3p 2L + 9615616 9615741 stop_codon Trx-2 FlyBase G2707.1 AAGGTCGAAGAGTTCGCCGGAGCCAACGCCAAGCGTCTGGAGGATGTCATCAAGGCCAATATCTAAGTGGGCAGCGCATAGACGTCTGGCCGTCCCCCTGATCCACCTATGAGTTTTCTTCATAAC 47 9615702 0.885607615 16 42 263 0.944444444 1.531478917 0.166666667 0.361702128 0.583333333 47 3 1 68 2L:9615616-9615741 6 32 916 FBgn0040070 814.6666667 126.4433333 193.1533333 0.039279869 0.253077795 0.165671487 3 3 3 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 2L 9622451 9622456 + 2L_9622451_9622456_+ 0.992909483 0.997082604 0.994996043 0.002950827 GlcAT-S FBtr0079842|FBtr0079842|FBtr0079841|FBtr0079841 9622426|9622426|9622426|9622426 9623109|9623109|9623109|9623109 2L + 9622419 9622483 stop_codon GlcAT-S FlyBase G3431.1 CTTAGCTGAGTCCTATGGTCCAACCCGAATAATACTTATAGACTTTTAGAGCTAAATGTATAGTT 74 9622464 0.98430108 7 73 587 0.988235294 1.924279286 0.164705882 0.148648649 0.258823529 74 1 0 84 2L:9622419-9622483 6 GlcAT-S FBtr0079842|FBtr0079842|FBtr0302199|FBtr0302199|FBtr0079841|FBtr0079841 9622426|9622426|9622426|9622426|9622426|9622426 9623109|9623109|9622588|9622588|9623109|9623109 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 2L + 9622443 9622504 3'utr GlcAT-S FlyBase G2713.1 CCGAATAATACTTATAGACTTTTAGAGCTAAATGTATAGTTATTCTAAAACAAATCTCGAAT 42 9622464 0.982664584 7 41 314 1 1.785329835 0.245901639 0.404761905 0.590163934 42 0 0 61 2L:9622443-9622504 6 55 917 FBgn0032135 82.33333333 4.263333333 6.536666667 0.668016194 12.90070367 8.414074452 -13 -13 -13 0.1 dme-miR-1002-5p 6mer3-8 CTACTT 2L 9682843 9682848 - 2L_9682843_9682848_- 0.421414892 0.605222834 0.513318863 0.129971813 Pka-C1 FBtr0079851|FBtr0079852 9682313|9682313 9696504|9696504 2L - 9682827 9682871 3'utr Pka-C1 FlyBase G9342.1 GATACATTATGCACTAATTTGTACTACTTTTATCGTCTATCTATT 16 9682852 0.80132787 2 16 205 1 1.230448921 0.117647059 0.0625 0.117647059 16 0 0 17 2L:9682827-9682871 6 Pka-C1 FBtr0079852|FBtr0079851 9682313|9682313 9696504|9696504 CTACTT 6mer3-8 dme-miR-1002-5p 2L - 9682831 9682864 3'utr Pka-C1 FlyBase G7262.1 TATGCACTAATTTGTACTACTTTTATCGTCTATC 13 9682852 0.693629994 2 12 137 0.894736842 1.230448921 0 0.461538462 0.631578947 13 2 0 17 2L:9682831-9682864 6 14.5 918 FBgn0000273 1905.386667 46.66 72.09 0.007610004 0.31075868 0.201137467 4 4 4 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2L 9683573 9683578 - 2L_9683573_9683578_- 0.99483711 0.994345173 0.994591142 0.000347826 Pka-C1 FBtr0079851|FBtr0335495|FBtr0079852 9682313|9683360|9682313 9696504|9696504|9696504 2L - 9683513 9683603 3'utr Pka-C1 FlyBase G9347.1 CTGTTATTATTTATTTCTAAAAGTGAAGACTTTTAAATTATGTTGTTGTGAGATGAGAGAAGAGATATAAAGAGCGAGAGCAACTCGGGAT 66 9683571 0.986744313 6 65 478 0.976190476 1.913813852 0.05952381 0.196969697 0.369047619 66 2 0 82 2L:9683513-9683603 6 Pka-C1 FBtr0335495|FBtr0079852|FBtr0079851 9683360|9682313|9682313 9696504|9696504|9696504 AAGACT 6mer3-8 dme-miR-14-3p 2L - 9683480 9683597 3'utr Pka-C1 FlyBase G7266.1 TTATTTATTTCTAAAAGTGAAGACTTTTAAATTATGTTGTTGTGAGATGAGAGAAGAGATATAAAGAGCGAGAGCAACTCGGGATCGTAACAAATAACAAATAAATTTAATTTATAGA 49 9683571 0.98632084 10 46 388 0.913043478 1.799340549 0.028985507 0.265306122 0.47826087 49 6 0 63 2L:9683480-9683597 6 49.5 919 FBgn0000273 1905.386667 46.66 72.09 0.025978979 1.060865838 0.686641698 -7 -7 -7 0.1 dme-miR-283-5p 7mer-m1 GATATTT 2L 9684995 9685001 - 2L_9684995_9685001_- 0.763679656 0.758513578 0.761096617 0.003652984 Pka-C1 FBtr0079851|FBtr0335495|FBtr0079852 9682313|9683360|9682313 9696504|9696504|9696504 2L - 9684964 9685020 3'utr Pka-C1 FlyBase G9351.1 ATTTAACCACGAGACTACAGATATTTAGTTGTAAACGTAGCTTAGTCTTAACTAAAG 9 9684993 0.863093103 6 8 73 0.9 0.954242509 0 0.111111111 0.2 9 1 0 9 2L:9684964-9685020 7 Pka-C1 FBtr0335495|FBtr0079852|FBtr0079851 9683360|9682313|9682313 9696504|9696504|9696504 GATATTT 7mer-m1 dme-miR-283-5p 2L - 9684964 9685018 3'utr Pka-C1 FlyBase G7267.1 TTAACCACGAGACTACAGATATTTAGTTGTAAACGTAGCTTAGTCTTAACTAAAG 6 9684996 0.982125427 4 6 50 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 2L:9684964-9685018 7 7 920 FBgn0000273 1905.386667 46.66 72.09 0.003673795 0.150021432 0.097100846 -8 -5 -6.5 0.1 dme-miR-277-3p 6mer2-7 GCATTT 2L 9708303 9708308 + 2L_9708303_9708308_+ 0.996053242 0.887767772 0.941910507 0.076569341 pelo FBtr0079847 9708268 9708883 2L + 9708265 9708345 stop_codon pelo FlyBase G3490.1 ACTAGGATCATAAATAGGAATAGCTTCATGGAATCTTGGCATTTGATAACGGAAAATTTTGACTTAGGAACTTAACTAGCG 40 9708293 0.974859371 8 39 281 0.980392157 1.397940009 0.215686275 0.225 0.392156863 40 0 1 50 2L:9708265-9708345 6 pelo FBtr0079847 9708268 9708883 GCATTT 6mer2-7 dme-miR-277-3p 2L + 9708254 9708346 stop_codon pelo FlyBase G2746.1 TAGCGATAGCGACTAGGATCATAAATAGGAATAGCTTCATGGAATCTTGGCATTTGATAACGGAAAATTTTGACTTAGGAACTTAACTAGCGA 27 9708323 0.98099544 8 24 170 0.923076923 1.255272505 0.025641026 0.296296296 0.512820513 27 2 1 36 2L:9708254-9708346 6 21 921 FBgn0011207 455.0266667 27.06 41.48666667 0.046151141 0.776053215 0.506186727 10 -20 -5 0.1 dme-miR-305-5p 6mer2-7 GTACAA 2L 9762211 9762216 + 2L_9762211_9762216_+ 0.999998724 0.999917303 0.999958014 5.76E-05 zf30C FBtr0079865 9762140 9762375 2L + 9762187 9762223 3'utr zf30C FlyBase G3517.1 TTGTAAACGGATGCGTATTCTACTGTACAACAAATGG 10 9762209 0.740033823 4 10 68 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 2L:9762187-9762223 6 zf30C FBtr0079865 9762140 9762375 GTACAA 6mer2-7 dme-miR-305-5p 2L + 9762185 9762226 3'utr zf30C FlyBase G2769.1 TTTTGTAAACGGATGCGTATTCTACTGTACAACAAATGGGAT 6 9762210 0.989693604 2 5 54 0.9 0.954242509 0.3 0.333333333 0.6 6 1 0 9 2L:9762185-9762226 6 7.5 922 FBgn0022720 989.03 40.54 62.34666667 0.007583188 0.185002467 0.120295124 2 1 1.5 0.1 dme-miR-968-5p 7mer-A1 CTACTTA 2L 9762246 9762252 + 2L_9762246_9762252_+ 0.569760645 0.626574072 0.598167358 0.040173211 zf30C FBtr0079865 9762140 9762375 2L + 9762236 9762274 3'utr zf30C FlyBase G3518.1 ATAATAATATCTACTTAATGACTGGATTAATTAAATAAC 11 9762252 0.632889169 6 10 86 0.933333333 0.84509804 0.066666667 0.272727273 0.466666667 11 0 1 14 2L:9762236-9762274 7 zf30C FBtr0079865 9762140 9762375 CTACTTA 7mer-A1 dme-miR-968-5p 2L + 9762236 9762273 3'utr zf30C FlyBase G2770.1 ATAATAATATCTACTTAATGACTGGATTAATTAAATAA 10 9762250 0.728046111 8 10 76 1 1.255272505 0 0.6 0.777777778 10 0 0 18 2L:9762236-9762273 7 10 923 FBgn0022720 989.03 40.54 62.34666667 0.010110917 0.246669956 0.160393499 -6 -4 -5 0.1 dme-miR-2b-2-5p 7mer-A1 TGAAGAA 2L 9890063 9890069 + 2L_9890063_9890069_+ 0.766431146 0.78512372 0.775777433 0.013217664 FKBP59 FBtr0342837|FBtr0079872 9889989|9889989 9890119|9890119 2L + 9890034 9890092 3'utr FKBP59 FlyBase G3553.1 AATCCCACATCGAAAATCCAGTAATGTAATGAAGAAATGGTCTTAATGCTTATACGAAA 13 9890071 0.973548265 3 13 79 1 1.176091259 0.066666667 0.076923077 0.2 13 0 0 15 2L:9890034-9890092 7 FKBP59 FBtr0342837|FBtr0079872 9889989|9889989 9890119|9890119 TGAAGAA 7mer-A1 dme-miR-2b-2-5p 2L + 9890034 9890115 3'utr FKBP59 FlyBase G2808.1 AATCCCACATCGAAAATCCAGTAATGTAATGAAGAAATGGTCTTAATGCTTATACGAAATAAATATAAACGCTTTGAGAGCT 15 9890071 0.96580578 4 15 84 1 1.414973348 0.038461538 0.466666667 0.692307692 15 0 0 26 2L:9890034-9890115 7 11 924 FBgn0029174 1272.643333 104.36 159.8766667 0.008643427 0.105404369 0.068803036 -8 -8 -8 0.1 dme-miR-79-3p 6mer2-7 AGCTTT 2L 9909 9914 - 2L_9909_9914_- 0.712482193 0.714013146 0.713247669 0.00108251 l(2)gl FBtr0078168|FBtr0306591|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0306590|FBtr0078170|FBtr0330655|FBtr0078171|FBtr0306592|FBtr0078166 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11214|11214|11214|11214|11309|11214|11214|11214 2L - 9885 9932 3'utr l(2)gl FlyBase G6256.1 ATGTTACAGGCAGAAGGAAGCTTTTCCGACCATATAAAGTATATAATT 45 9909 0.747433946 3 43 280 0.957446809 1.653212514 0.106382979 0.044444444 0.085106383 45 2 0 45 2L:9885-9932 6 l(2)gl FBtr0306592|FBtr0306590|FBtr0078166|FBtr0330655|FBtr0078171|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0078170|FBtr0078168|FBtr0306591 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11309|11214|11214|11214|11214|11214|11214|11214 AGCTTT 6mer2-7 dme-miR-79-3p 2L - 9886 9977 3'utr l(2)gl FlyBase G4878.2 AAAAGGTATAGTATATACAATAGTATTGTAGATTCGTTGAGAAGTATGTTACAGGCAGAAGGAAGCTTTTCCGACCATATAAAGTATATAAT 27 9909 0.772933269 9 27 199 1 1.591064607 0.333333333 0.333333333 0.538461538 27 0 0 39 2L:9886-9977 6 30.5 925 FBgn0002121 6538.69 148.3266667 227.85 0.004664543 0.205627219 0.133859996 -5 -5 -5 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC 2L 9935126 9935132 - 2L_9935126_9935132_- 0.661611862 0.661615619 0.661613741 2.62E-06 CG31712 FBtr0079896|FBtr0331636 9934765|9934765 9935255|9937003 2L - 9935089 9935143 3'utr CG31712 FlyBase G9443.1 ATTGTTGTAATTGTGTTCTATATTATTTTTATTATTTTAAGGACGAGCTGTGGTG 13 9935133 0.992917741 3 13 159 1 1.176091259 0.333333333 0.153846154 0.266666667 13 0 0 15 2L:9935089-9935143 7 CG31712 FBtr0331636|FBtr0079896 9934765|9934765 9937003|9935255 TGTGTTC 7mer-m8 dme-miR-317-3p 2L - 9935107 9935147 3'utr CG31712 FlyBase G7341.1 TTTCATTGTTGTAATTGTGTTCTATATTATTTTTATTATTT 14 9935133 0.771693206 3 12 182 0.888888889 1.380211242 0.481481481 0.428571429 0.703703704 14 3 0 24 2L:9935107-9935147 7 12.5 926 FBgn0051712 467.1633333 25.39666667 38.91333333 0.026757237 0.492190576 0.321226658 1 1 1 0.1 dme-miR-14-3p 6mer2-7 AGACTG 2L 9935651 9935656 - 2L_9935651_9935656_- 0.972529092 0.999973333 0.986251212 0.01940598 CG31712 FBtr0331636 9934765 9937003 2L - 9935637 9935674 5'utr CG31712 FlyBase G9444.1 TGCATCGCTGATGTCAAGAGACTGTTTATTTCTATAAT 14 9935649 0.695281336 4 13 111 1 1.230448921 0.235294118 0.142857143 0.294117647 14 0 0 17 2L:9935637-9935674 6 CG31712 FBtr0331636 9934765 9937003 AGACTG 6mer2-7 dme-miR-14-3p 2L - 9935640 9935673 5'utr CG31712 FlyBase G7342.1 GCATCGCTGATGTCAAGAGACTGTTTATTTCTAT 16 9935648 0.588694729 6 14 119 0.904761905 0.977723605 0.238095238 0.3125 0.476190476 16 1 1 19 2L:9935640-9935673 6 14.5 927 FBgn0051712 467.1633333 25.39666667 38.91333333 0.031038395 0.570941068 0.372622923 -7 -8 -7.5 0.1 dme-miR-14-3p 6mer2-7 AGACTG 2L 9959387 9959392 - 2L_9959387_9959392_- 0.999713601 0.99984774 0.99978067 9.48E-05 CG5850 FBtr0309209 9959246 9961354 2L - 9959362 9959407 3'utr CG5850 FlyBase G9457.1 TGTTTTTAACAGCTTAGACTGGAGATAATGCCGTTTATAACGATAT 10 9959394 0.975115098 3 10 66 1 1.079181246 0.25 0.1 0.25 10 0 0 12 2L:9959362-9959407 6 CG5850 FBtr0309209 9959246 9961354 AGACTG 6mer2-7 dme-miR-14-3p 2L - 9959374 9959402 3'utr CG5850 FlyBase G7348.1 TTAACAGCTTAGACTGGAGATAATGCCGT 6 9959394 0.74304757 2 6 25 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2L:9959374-9959402 6 8 928 FBgn0032172 968.71 41.72666667 64.24 0.008258406 0.191723918 0.124533001 2 2 2 0.1 dme-miR-33-5p 6mer2-7 AATGCA 2L 9959450 9959455 - 2L_9959450_9959455_- 0.999416841 0.999999995 0.999708418 0.000412385 CG5850 FBtr0309209 9959246 9961354 2L - 9959448 9959515 3'utr CG5850 FlyBase G9458.1 CGTGTAGTTCTTGTTGTTGGTTGACTGTTGTTGGGTATGGAGAATCGTAGACTTAGTTTAAATGCATC 14 9959468 0.782351108 7 12 116 0.9375 0.875061263 0.125 0.142857143 0.25 14 0 1 15 2L:9959448-9959515 6 CG5850 FBtr0309209 9959246 9961354 AATGCA 6mer2-7 dme-miR-33-5p 2L - 9959450 9959489 3'utr CG5850 FlyBase G7349.1 GTTGTTGGGTATGGAGAATCGTAGACTTAGTTTAAATGCA 5 9959459 0.826700212 2 4 36 1 0.84509804 0.571428571 0.4 0.571428571 5 0 0 7 2L:9959450-9959489 5 1.5 929 FBgn0032172 968.71 41.72666667 64.24 0.001548451 0.035948235 0.023349938 13 4 8.5 0.1 dme-miR-1006-3p 6mer2-7 GAATTT 2L 9959858 9959863 + 2L_9959858_9959863_+ 0.998362034 0.998863661 0.998612848 0.000354755 CG4658 FBtr0343738|FBtr0079887|FBtr0079885|FBtr0079886 9959719|9959719|9959719|9959719 9960168|9960168|9960168|9960168 2L + 9959806 9959928 3'utr CG4658 FlyBase G3608.1 CTGGGATTTGCTATAGTTATGCACTCGCAGCACGAGAAGTAATCACTGGACTGAATTTGTTTTTAATTGATGTTGATTGATATTCGGTTTACTTGTTTTTCTTTCTATTATCAGTGTTTAGTA 168 9959852 0.979499304 20 163 1170 0.974489796 1.803912113 0.163265306 0.130952381 0.255102041 168 3 2 191 2L:9959806-9959928 6 CG4658 FBtr0079885|FBtr0079886|FBtr0343738|FBtr0079887 9959719|9959719|9959719|9959719 9960168|9960168|9960168|9960168 GAATTT 6mer2-7 dme-miR-1006-3p 2L + 9959781 9959901 3'utr CG4658 FlyBase G2845.1 GAGGGGCATGCCACATTGAAATTTACTGGGATTTGCTATAGTTATGCACTCGCAGCACGAGAAGTAATCACTGGACTGAATTTGTTTTTAATTGATGTTGATTGATATTCGGTTTACTTGT 151 9959852 0.97960447 14 145 1010 0.955752212 2.334453751 0.159292035 0.377483444 0.584070796 151 10 0 216 2L:9959781-9959901 6 144.5 930 FBgn0032170 375.85 20.51333333 31.41333333 0.384461886 7.044198895 4.599957555 6 6 6 0.1 dme-miR-1006-3p 6mer2-7 GAATTT 2L 9960548 9960553 - 2L_9960548_9960553_- 0.999975461 0.996677172 0.998326316 0.00233225 CG5850 FBtr0309209|FBtr0309210|FBtr0309211|FBtr0329986|FBtr0079890|FBtr0303901 9959246|9960448|9960448|9960448|9960448|9960448 9961354|9961354|9961354|9961003|9961354|9961354 2L - 9960458 9960620 3'utr CG5850 FlyBase G9459.1 ATGTAGGTCTCCAACTTTTTGTGTGGCGAAGTAGTTAATTAAAAAAAAACATGCCTGAACCGATTGTGAATTTTGTGACTGCCGCCGGTCAGAAAAGGGCGTGACTTGTATTTAAATAGAAATTCTTATTGTAAAACTAATATACACATCAATAATATAATAT 107 9960556 0.983290046 19 102 789 0.955555556 1.809559715 0.162962963 0.224299065 0.385185185 107 5 1 129 2L:9960458-9960620 6 CG5850 FBtr0079890|FBtr0303901|FBtr0309211|FBtr0329986|FBtr0309209|FBtr0309210 9960448|9960448|9960448|9960448|9959246|9960448 9961354|9961354|9961354|9961003|9961354|9961354 GAATTT 6mer2-7 dme-miR-1006-3p 2L - 9960460 9960579 3'utr CG5850 FlyBase G7350.1 AAAAAAAACATGCCTGAACCGATTGTGAATTTTGTGACTGCCGCCGGTCAGAAAAGGGCGTGACTTGTATTTAAATAGAAATTCTTATTGTAAAACTAATATACACATCAATAATATAAT 87 9960549 0.983647737 15 84 639 0.965517241 2.049218023 0.181034483 0.287356322 0.465517241 87 4 0 112 2L:9960460-9960579 6 80.5 931 FBgn0032172 968.71 41.72666667 64.24 0.083100205 1.92922192 1.253113325 3 -4 -0.5 0.1 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2L 9964338 9964343 - 2L_9964338_9964343_- 0.999870886 0.999887609 0.999879248 1.18E-05 Dref FBtr0310483|FBtr0079889 9964278|9964145 9964544|9964544 2L - 9964319 9964402 3'utr Dref FlyBase G9472.1 AGCCTTGGGACGTACACGGAACATCTTAAGTTATCGACGTATAAATGTTAAGGGAACATTTTGACATCATATATTCAAATCAAA 12 9964342 0.974404867 5 12 70 1 1.204119983 0.3125 0.333333333 0.5 12 0 0 16 2L:9964319-9964402 6 Dref FBtr0310483|FBtr0079889 9964278|9964145 9964544|9964544 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2L - 9964330 9964353 3'utr Dref FlyBase G7360.1 AAGGGAACATTTTGACATCATATA 7 9964342 0.638058883 2 6 38 1 1.079181246 0.166666667 0.428571429 0.666666667 7 0 0 12 2L:9964330-9964353 6 7.5 932 FBgn0015664 973.63 41.70666667 63.79666667 0.007703132 0.179827366 0.117561001 -1 -1 -1 0.1 dme-miR-33-5p 7mer-A1 AATGCAA 2L 9964511 9964517 - 2L_9964511_9964517_- 0.715151521 0.770867615 0.743009568 0.039397232 Dref FBtr0310483|FBtr0079889 9964278|9964145 9964544|9964544 2L - 9964498 9964557 stop_codon Dref FlyBase G9473.2 TCACAACAATTAGTCTGCACTGGCGACTACTGTTTCTTATAATGCAAATACTTTTTAATT 29 9964519 0.792664869 9 25 265 0.894736842 1.531478917 0.157894737 0.206896552 0.394736842 29 4 0 34 2L:9964498-9964557 7 Dref FBtr0310483|FBtr0079889 9964278|9964145 9964544|9964544 AATGCAA 7mer-A1 dme-miR-33-5p 2L - 9964442 9964546 stop_codon Dref FlyBase G7361.1 AGTCTGCACTGGCGACTACTGTTTCTTATAATGCAAATACTTTTTAATTACTTTTAACGTAATCCGATCTTGTGTATATGAAAATGACTACCAGGGGCGAGGCAA 17 9964518 0.991908626 11 14 142 0.793103448 1.361727836 0.24137931 0.529411765 0.724137931 17 6 0 23 2L:9964442-9964546 7 14.5 933 FBgn0015664 973.63 41.70666667 63.79666667 0.014892721 0.34766624 0.227284602 2 1 1.5 0.1 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 9994974 9994981 + 2L_9994974_9994981_+ 0.625364912 0.625364804 0.625364858 7.07E-08 bib FBtr0329984|FBtr0079929 9994780|9994657 9995538|9995538 2L + 9994964 9994991 3'utr bib FlyBase G3617.1 AAAGATCATGTACGCTTAAGGAACTAAT 12 9994973 0.71476225 3 11 55 0.9375 1.176091259 0.125 0.333333333 0.5 12 1 0 15 2L:9994964-9994991 8 bib FBtr0329984|FBtr0079929 9994780|9994657 9995538|9995538 TACGCTTA 8mer-A1 dme-miR-965-3p 2L + 9994959 9994990 3'utr bib FlyBase G2856.1 CTAGCAAAGATCATGTACGCTTAAGGAACTAA 8 9994972 0.793843936 3 7 37 0.818181818 0.954242509 0.363636364 0.375 0.545454545 8 2 0 9 2L:9994959-9994990 8 10 934 FBgn0000180 1.333333333 0.05 0.08 7.5 200 125 1 2 1.5 0.1 dme-miR-14-3p 7mer-A1 AGACTGA 2L 9995043 9995049 + 2L_9995043_9995049_+ 0.815863447 0.812750262 0.814306854 0.002201294 bib FBtr0329984|FBtr0079929 9994780|9994657 9995538|9995538 2L + 9995002 9995066 3'utr bib FlyBase G3618.1 ATTCACCGAAGGCTAGACTAAACGAGTGATCTAGATGATCTAGACTGAAAGACAGGTGCATTTAA 15 9995040 0.952063857 5 15 65 1 1.278753601 0.157894737 0.266666667 0.421052632 15 0 0 19 2L:9995002-9995066 7 bib FBtr0329984|FBtr0079929 9994780|9994657 9995538|9995538 AGACTGA 7mer-A1 dme-miR-14-3p 2L + 9995001 9995065 3'utr bib FlyBase G2857.1 CATTCACCGAAGGCTAGACTAAACGAGTGATCTAGATGATCTAGACTGAAAGACAGGTGCATTTA 21 9995041 0.953744492 8 19 86 0.966666667 1.161368002 0.1 0.333333333 0.533333333 21 0 1 29 2L:9995001-9995065 7 15.5 935 FBgn0000180 1.333333333 0.05 0.08 11.625 310 193.75 3 2 2.5 0.1 dme-miR-14-3p 7mer-A1 AGACTGA 2L 9995216 9995222 + 2L_9995216_9995222_+ 0.823326169 0.82334953 0.823337849 1.65E-05 bib FBtr0329984|FBtr0079929 9994780|9994657 9995538|9995538 2L + 9995193 9995242 3'utr bib FlyBase G3619.1 ATGTTTCTTGTAAATGCAAAACTAGACTGAACTTACCTAAAGCATTTTGT 18 9995215 0.916712645 6 17 102 0.95 0.977723605 0.15 0.111111111 0.2 18 0 1 19 2L:9995193-9995242 7 bib FBtr0329984|FBtr0079929 9994780|9994657 9995538|9995538 AGACTGA 7mer-A1 dme-miR-14-3p 2L + 9995200 9995230 3'utr bib FlyBase G2858.1 TTGTAAATGCAAAACTAGACTGAACTTACCT 9 9995215 0.869672552 3 9 40 1 1.230448921 0 0.555555556 0.764705882 9 0 0 17 2L:9995200-9995230 7 13.5 936 FBgn0000180 1.333333333 0.05 0.08 10.125 270 168.75 1 1 1 0.1 dme-miR-7-5p 7mer-A1 TCTTCCA 2L 9995956 9995962 - 2L_9995956_9995962_- 0.529975951 0.712868169 0.62142206 0.129324315 CG31875 FBtr0079973|FBtr0303883|FBtr0303884|FBtr0308121 9995559|9995559|9995559|9995559 9996005|9996005|9996005|9996005 2L - 9995926 9995987 3'utr CG31875 FlyBase G9488.1 GTGAATTAATCCCACATGGACTGTATCTTCCAAGCGCATGGTTATTTGGATTATGATAGTAT 41 9995971 0.978281172 3 40 272 0.979166667 1.672097858 0.1875 0.170731707 0.291666667 41 1 0 47 2L:9995926-9995987 7 CG31875 FBtr0308121|FBtr0303884|FBtr0303883|FBtr0079973 9995559|9995559|9995559|9995559 9996005|9996005|9996005|9996005 TCTTCCA 7mer-A1 dme-miR-7-5p 2L - 9995948 9995988 3'utr CG31875 FlyBase G7367.1 CGTGAATTAATCCCACATGGACTGTATCTTCCAAGCGCATG 22 9995971 0.919652031 4 22 134 1 1.431363764 0.074074074 0.181818182 0.333333333 22 0 0 27 2L:9995948-9995988 7 31 937 FBgn0051875 18.32333333 1.95 2.983333333 1.691831908 15.8974359 10.39106145 9 9 9 0.1 dme-miR-980-5p 6mer3-8 GAAAAA 2R 10028711 10028716 - 2R_10028711_10028716_- 0.606128176 0.977385871 0.791757023 0.262518837 CG1407 FBtr0330325|FBtr0088435 10028441|10028441 10028876|10028918 2R - 10028702 10028761 3'utr CG1407 FlyBase G21601.1 GAGTCGATAGACAATTGTAATGTATATGTATGTAAGTGATAATGCGAAAAATGTTAGGAG 18 10028719 0.983105596 5 17 126 0.952380952 1 0.285714286 0.111111111 0.238095238 18 0 1 20 2R:10028702-10028761 6 CG1407 FBtr0088435|FBtr0330325 10028441|10028441 10028918|10028876 GAAAAA 6mer3-8 dme-miR-980-5p 2R - 10028700 10028761 3'utr CG1407 FlyBase G16398.1 GAGTCGATAGACAATTGTAATGTATATGTATGTAAGTGATAATGCGAAAAATGTTAGGAGAT 15 10028719 0.990835112 4 12 122 0.807692308 1.021189299 0.230769231 0.466666667 0.692307692 15 4 1 21 2R:10028700-10028761 6 7.5 938 FBgn0033474 835.29 47.03 72.28 0.008978918 0.159472677 0.103763143 3 3 3 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2R 10029424 10029429 - 2R_10029424_10029429_- 0.999962108 0.999999815 0.999980961 2.67E-05 CG1407 FBtr0339418|FBtr0088436|FBtr0339420|FBtr0339419 10029261|10029261|10029261|10029261 10029804|10029804|10029804|10029804 2R - 10029377 10029502 3'utr CG1407 FlyBase G21603.1 TATCCTCCGAAGATTTGTACCTTGCTAATGCATTCATGAAACCAACTATCCTTGTAGATATCGAAAGATCTTCAAGACTTAAACCTAATGATAAGCAATGAGATTTCAGTACACACTATTAACACA 36 10029432 0.931954344 13 31 253 0.880952381 1.091080469 0.071428571 0.111111111 0.238095238 36 3 2 37 2R:10029377-10029502 6 CG1407 FBtr0339419|FBtr0088436|FBtr0339420|FBtr0339418 10029261|10029261|10029261|10029261 10029804|10029804|10029804|10029804 AAGACT 6mer3-8 dme-miR-14-3p 2R - 10029406 10029500 3'utr CG1407 FlyBase G16401.1 TCCTCCGAAGATTTGTACCTTGCTAATGCATTCATGAAACCAACTATCCTTGTAGATATCGAAAGATCTTCAAGACTTAAACCTAATGATAAGCA 26 10029432 0.743163647 10 21 161 0.756756757 1.447158031 0.243243243 0.346153846 0.540540541 26 9 0 28 2R:10029406-10029500 6 16 939 FBgn0033474 835.29 47.03 72.28 0.019155024 0.340208378 0.221361372 3 3 3 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 2R 10029843 10029848 - 2R_10029843_10029848_- 0.999999591 0.999982215 0.999990903 1.23E-05 CG1407 FBtr0300719 10029713 10031507 2R - 10029792 10029872 stop_codon CG1407 FlyBase G21606.1 ATCCGTTGACAAGCGCTGATCCTGCCAAAGGCTTCCCACGCCCGCCGAATGGCGATCTGCCAGTTTAAATAATAACGTAGA 14 10029853 0.953639791 7 13 61 1 1.176091259 0.2 0.071428571 0.133333333 14 0 0 15 2R:10029792-10029872 6 CG1407 FBtr0300719 10029713 10031507 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 10029826 10029872 3'utr CG1407 FlyBase G16404.1 ATCCGTTGACAAGCGCTGATCCTGCCAAAGGCTTCCCACGCCCGCCG 5 10029854 0.880776931 3 5 19 1 0.954242509 0.333333333 0.6 0.777777778 5 0 0 9 2R:10029826-10029872 6 8 940 FBgn0033474 835.29 47.03 72.28 0.009577512 0.170104189 0.110680686 5 6 5.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 2R 10030113 10030118 - 2R_10030113_10030118_- 0.681860095 0.987699444 0.83477977 0.216261043 CG1407 FBtr0300719 10029713 10031507 2R - 10030097 10030143 3'utr CG1407 FlyBase G21609.1 AATCCAACAGATAAGTTGATTGGCGCTAGTCCCCTCGACACCACTAA 11 10030124 0.941018018 3 11 70 1 1.113943352 0 0.181818182 0.307692308 11 0 0 13 2R:10030097-10030143 6 CG1407 FBtr0300719 10029713 10031507 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 2R - 10030091 10030147 3'utr CG1407 FlyBase G16406.1 TGGCAATCCAACAGATAAGTTGATTGGCGCTAGTCCCCTCGACACCACTAACCATCA 9 10030124 0.970478575 3 9 55 1 1.146128036 0 0.555555556 0.714285714 9 0 0 14 2R:10030091-10030147 6 10 941 FBgn0033474 835.29 47.03 72.28 0.01197189 0.212630236 0.138350858 6 6 6 0.1 dme-miR-276a-3p 6mer2-7 GTTCCT 2R 10031100 10031105 - 2R_10031100_10031105_- 0.999730611 0.996266456 0.997998533 0.002449489 CG1407 FBtr0300719 10029713 10031507 2R - 10031086 10031131 5'utr CG1407 FlyBase G21610.1 GTATTTGGTGACGACTGGCAATACTGGTTCCTGCCCGTGTTTTCGA 7 10031107 0.754959742 5 7 56 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 2R:10031086-10031131 6 CG1407 FBtr0300719 10029713 10031507 GTTCCT 6mer2-7 dme-miR-276a-3p 2R - 10031089 10031137 5'utr CG1407 FlyBase G16407.1 TGCGAAGTATTTGGTGACGACTGGCAATACTGGTTCCTGCCCGTGTTTT 6 10031107 0.971774704 3 6 38 1 0.84509804 0.428571429 0.166666667 0.285714286 6 0 0 7 2R:10031089-10031137 6 4.5 942 FBgn0033474 835.29 47.03 72.28 0.005387351 0.095683606 0.062257886 2 2 2 0.1 dme-miR-14-3p 7mer-A1 AGACTGA 2R 10036098 10036104 - 2R_10036098_10036104_- 0.823349438 0.823349475 0.823349457 7.07E-08 oys FBtr0345630|FBtr0088434|FBtr0339416|FBtr0345629 10034593|10035771|10035534|10035534 10036943|10036943|10036943|10036943 2R - 10036088 10036126 3'utr oys FlyBase G21617.1 AAGTCAACCAAATCCTAACTTTAGACTGAAGCTATTGAC 45 10036106 0.688415768 5 45 251 1 1.748188027 0 0.177777778 0.339285714 45 0 0 56 2R:10036088-10036126 7 oys FBtr0339416|FBtr0345629|FBtr0345630|FBtr0088434 10035534|10035534|10034593|10035771 10036943|10036943|10036943|10036943 AGACTGA 7mer-A1 dme-miR-14-3p 2R - 10036067 10036121 3'utr oys FlyBase G16412.1 AACCAAATCCTAACTTTAGACTGAAGCTATTGACATTTACTAAGCAAACAAAAAG 20 10036106 0.967176757 6 20 108 1 1.544068044 0 0.45 0.685714286 20 0 0 35 2R:10036067-10036121 7 32 943 FBgn0033476 2953.663333 97.33666667 148.7366667 0.010834004 0.328755865 0.215145335 2 2 2 0.1 dme-miR-2535b-3p 6mer3-8 CCGTGA 2R 10050050 10050055 + 2R_10050050_10050055_+ 1 0.976924362 0.988462181 0.016316913 CoVIIc FBtr0088397|FBtr0339412|FBtr0088396|FBtr0339411 10049868|10049868|10049868|10049868 10050066|10050066|10050066|10050066 2R + 10049998 10050067 3'utr CoVIIc FlyBase G14523.1 CAGTGTGTTACAGCTTAAATTTAAGTAAAAAGTGGAAACGAAATAAAGTTACCCGTGACCGTAGAACCGA 15 10050053 0.959598494 8 14 67 0.9375 1.176091259 0.3125 0.066666667 0.125 15 1 0 15 2R:10049998-10050067 6 CoVIIc FBtr0088396|FBtr0339411|FBtr0088397|FBtr0339412 10049868|10049868|10049868|10049868 10050066|10050066|10050066|10050066 CCGTGA 6mer3-8 dme-miR-2535b-3p 2R + 10049968 10050065 3'utr CoVIIc FlyBase G11052.1 TTATCTGCTGAGTTGGCCGGCAGGCCATTACAGTGTGTTACAGCTTAAATTTAAGTAAAAAGTGGAAACGAAATAAAGTTACCCGTGACCGTAGAACC 19 10050059 0.921499353 10 17 89 0.84 1.322219295 0.28 0.263157895 0.44 19 4 0 21 2R:10049968-10050065 6 8.5 944 FBgn0040773 467.34 157.2566667 240.2766667 0.018188043 0.054051763 0.035375886 -3 -9 -6 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 10071028 10071034 - 2R_10071028_10071034_- 0.661615214 0.661615278 0.661615246 7.07E-08 CG1371 FBtr0088428 10070979 10071210 2R - 10070963 10071073 3'utr CG1371 FlyBase G21645.1 ATTTTTCACTTTCCATACATAGATTGAGGCAAGTTTATTTGTGTTCGTTATCCACTCTTATAGCTAAAATAAATAAATACAATTAAATAGATTAATTAGACAAGGCTGTTC 125 10071035 0.991200133 11 124 1316 0.993506494 2.184691431 0.181818182 0.16 0.318181818 125 1 0 153 2R:10070963-10071073 7 CG1371 FBtr0088428 10070979 10071210 TGTGTTC 7mer-m8 dme-miR-317-3p 2R - 10070995 10071064 3'utr CG1371 FlyBase G16436.1 TTTCCATACATAGATTGAGGCAAGTTTATTTGTGTTCGTTATCCACTCTTATAGCTAAAATAAATAAATA 71 10071035 0.851982903 7 70 724 0.99 1.995635195 0.18 0.323943662 0.52 71 1 0 99 2R:10070995-10071064 7 82 945 FBgn0033482 1240.746667 38.63666667 59.06666667 0.066089237 2.122336295 1.388261851 1 1 1 0.1 dme-miR-1003-3p 7mer-A1 TGTGAGA 2R 10071122 10071128 - 2R_10071122_10071128_- 0.592812466 0.597452838 0.595132652 0.003281188 CG1371 FBtr0088428 10070979 10071210 2R - 10071111 10071177 3'utr CG1371 FlyBase G21647.1 AGTCACATTTCGAGGTATTCGCGGTAGGTATTCATTTGGTTTTTGTTTCTGTGAGATTTTGTTTAAC 28 10071131 0.668112048 12 25 342 0.947368421 1.255272505 0.447368421 0.25 0.447368421 28 1 1 36 2R:10071111-10071177 7 CG1371 FBtr0088428 10070979 10071210 TGTGAGA 7mer-A1 dme-miR-1003-3p 2R - 10071110 10071251 stop_codon CG1371 FlyBase G16438.1 AGATAAATGCCATCAAGAAGAAAAAGACCAAGAAGATTTAGTTCCGACTGATAGTCGCATTAGTTGTTCAATTTAGTCACATTTCGAGGTATTCGCGGTAGGTATTCATTTGGTTTTTGTTTCTGTGAGATTTTGTTTAACC 32 10071132 0.991875272 16 29 315 0.962264151 1.707570176 0.113207547 0.46875 0.679245283 32 2 0 51 2R:10071110-10071251 7 17 946 FBgn0033482 1240.746667 38.63666667 59.06666667 0.013701427 0.439996549 0.287810384 3 4 3.5 0.1 dme-miR-980-3p 8mer-A1 GGCAGCTA 2R 10095831 10095838 + 2R_10095831_10095838_+ 0.668734254 0.668734181 0.668734218 7.07E-08 CG2269 FBtr0088407|FBtr0305653|FBtr0088408|FBtr0088409 10095242|10095242|10095242|10095242 10096416|10096416|10096416|10096416 2R + 10095811 10095858 3'utr CG2269 FlyBase G14538.1 TGAAAGGCAGAGCTCACATTGGCAGCTAGTCCTCCAAAGTCACCGTCA 17 10095829 0.93294433 3 17 87 1 1.301029996 0.1 0.117647059 0.25 17 0 0 20 2R:10095811-10095858 8 CG2269 FBtr0088408|FBtr0088409|FBtr0088407|FBtr0305653 10095242|10095242|10095242|10095242 10096416|10096416|10096416|10096416 GGCAGCTA 8mer-A1 dme-miR-980-3p 2R + 10095810 10095857 3'utr CG2269 FlyBase G11062.1 ATGAAAGGCAGAGCTCACATTGGCAGCTAGTCCTCCAAAGTCACCGTC 8 10095829 0.968057719 3 8 43 1 1.146128036 0 0.5 0.714285714 8 0 0 14 2R:10095810-10095857 8 12.5 947 FBgn0033484 2.333333333 0.08 0.12 5.357142857 156.25 104.1666667 2 2 2 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 2R 10098489 10098494 + 2R_10098489_10098494_+ 0.978049675 0.98262153 0.980335603 0.003232751 Jra FBtr0088411|FBtr0088410 10098135|10098135 10098556|10098556 2R + 10098453 10098560 3'utr Jra FlyBase G14546.1 GTTATTAGTATAAGCTAGTGTTAATCAAGTATTATCTGTGTTGAACGTAAGATAATATGTAATGTACTTTTAAAATATACGTATATTTTCTGCACTTGATATATACAT 93 10098486 0.988045796 22 84 841 0.914529915 1.330413773 0.444444444 0.239130435 0.401709402 92 6 4 107 2R:10098453-10098560 6 Jra FBtr0088411|FBtr0088410 10098135|10098135 10098556|10098556 TGTGTT 6mer3-8 dme-miR-317-3p 2R + 10098313 10098546 3'utr Jra FlyBase G11068.1 CGAACTCCTGGAGGAGGAGAGCGATAACGAACAGCCTCTGGTGCTCTACATCCTCGCGGACGACGCAACCTGAGGCTTTGTGCCTTTCTTTGGTTTTAGCTGCAATATCTGAAATGCTTCTTAAGTGTTTTGTTTACTTAGTTATTAGTATAAGCTAGTGTTAATCAAGTATTATCTGTGTTGAACGTAAGATAATATGTAATGTACTTTTAAAATATACGTATATTTTCTGCA 109 10098487 0.989263631 39 93 869 0.875776398 0.973127854 0.329192547 0.376146789 0.577639752 109 6 14 141 2R:10098313-10098546 6 48.5 948 FBgn0001291 1037.55 83.52666667 128.0966667 0.046744735 0.580652885 0.378620313 3 2 2.5 0.1 dme-miR-970-3p 6mer2-7 CTTATG 2R 10108425 10108430 + 2R_10108425_10108430_+ 0.87362663 0.99998278 0.936804705 0.089347326 14-3-3zeta FBtr0088418|FBtr0332917|FBtr0088412|FBtr0088414|FBtr0100183|FBtr0088416|FBtr0088419|FBtr0332916|FBtr0088415|FBtr0088417|FBtr0088413 10107621|10107621|10107621|10107621|10107621|10107621|10107621|10107621|10107621|10107621|10107621 10109687|10108474|10109687|10109687|10108474|10108474|10109687|10109687|10109687|10109687|10108474 2R + 10108378 10108462 3'utr 14-3-3zeta FlyBase G14563.1 CAACAACAACCAAGCGAACCAAATGAGAAAACAAAAATAAAAACAAACTTATGTATTATTTGTAATTCTTTTTCTAAACAAATAA 19 10108427 0.97542098 10 18 111 0.956521739 1.342422681 0.304347826 0.210526316 0.347826087 19 1 0 22 2R:10108378-10108462 6 14-3-3zeta FBtr0088419|FBtr0088416|FBtr0088417|FBtr0088413|FBtr0332916|FBtr0088415|FBtr0332917|FBtr0088414|FBtr0088418|FBtr0100183|FBtr0088412 10107621|10107621|10107621|10107621|10107621|10107621|10107621|10107621|10107621|10107621|10107621 10109687|10108474|10109687|10108474|10109687|10109687|10108474|10109687|10109687|10108474|10109687 CTTATG 6mer2-7 dme-miR-970-3p 2R + 10108410 10108466 3'utr 14-3-3zeta FlyBase G11085.1 AAAAATAAAAACAAACTTATGTATTATTTGTAATTCTTTTTCTAAACAAATAAAACC 14 10108426 0.848795061 7 12 124 0.904761905 0.977723605 0.285714286 0.357142857 0.571428571 14 1 1 19 2R:10108410-10108466 6 11 949 FBgn0004907 11710.04 810.41 1245.203333 0.000939365 0.013573376 0.008833899 -2 -1 -1.5 0.1 dme-miR-34-5p 6mer3-8 CACTGC 2R 10137036 10137041 + 2R_10137036_10137041_+ 1 0.999998956 0.999999478 7.07E-07 gem FBtr0346634|FBtr0089758|FBtr0339428|FBtr0089759 10137011|10137011|10137011|10137011 10137472|10137472|10137472|10137472 2R + 10136948 10137059 stop_codon gem FlyBase G14608.1 ACGCGCTGGAGGTGCAGGCCGGCAAGGTGATCCTTAAGCTGATCAACAAGCAGGACAACAACTAAGCGATGTTCTGGCAACGCGTATGCACTGCAGTAGAGACCACCCGAGC 18 10137037 0.946080813 8 16 63 0.9 1.255272505 0.35 0.111111111 0.2 18 2 0 18 2R:10136948-10137059 6 gem FBtr0339428|FBtr0089759|FBtr0346634|FBtr0089758 10137011|10137011|10137011|10137011 10137472|10137472|10137472|10137472 CACTGC 6mer3-8 dme-miR-34-5p 2R + 10136979 10137107 stop_codon gem FlyBase G11114.1 CCTTAAGCTGATCAACAAGCAGGACAACAACTAAGCGATGTTCTGGCAACGCGTATGCACTGCAGTAGAGACCACCCGAGCAATCAAGTATAGTTTATAGCATTTACACGCAGTAAGATGGCACATCGA 13 10137034 0.96976766 10 12 70 0.9375 1.176091259 0.125 0.153846154 0.3125 13 1 0 15 2R:10136979-10137107 6 6.5 950 FBgn0050011 3271.46 66.12333333 101.57 0.00198688 0.098301154 0.063995274 -1 2 0.5 0.1 dme-miR-277-3p 7mer-A1 GCATTTA 2R 10137078 10137084 + 2R_10137078_10137084_+ 0.823349006 0.823349548 0.823349277 3.54E-07 gem FBtr0346634|FBtr0089758|FBtr0339428|FBtr0089759 10137011|10137011|10137011|10137011 10137472|10137472|10137472|10137472 2R + 10137064 10137168 3'utr gem FlyBase G14609.1 AAGTATAGTTTATAGCATTTACACGCAGTAAGATGGCACATCGAAACCGTTTTCTATATAGGTTTTAATTTGTATGAGATTTCGCGCAGCAATTTTGAACAAGTA 27 10137075 0.830986318 14 24 239 0.903225806 1.146128036 0.258064516 0.148148148 0.258064516 27 2 1 28 2R:10137064-10137168 7 gem FBtr0339428|FBtr0089759|FBtr0346634|FBtr0089758 10137011|10137011|10137011|10137011 10137472|10137472|10137472|10137472 GCATTTA 7mer-A1 dme-miR-277-3p 2R + 10136979 10137107 stop_codon gem FlyBase G11114.1 CCTTAAGCTGATCAACAAGCAGGACAACAACTAAGCGATGTTCTGGCAACGCGTATGCACTGCAGTAGAGACCACCCGAGCAATCAAGTATAGTTTATAGCATTTACACGCAGTAAGATGGCACATCGA 13 10137096 0.96976766 10 12 70 0.9375 1.176091259 0.125 0.153846154 0.3125 13 1 0 15 2R:10136979-10137107 7 7 951 FBgn0050011 3271.46 66.12333333 101.57 0.002139717 0.105862782 0.068917988 3 -18 -7.5 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA 2R 10137220 10137225 + 2R_10137220_10137225_+ 0.999995549 0.999999479 0.999997514 2.83E-06 gem FBtr0346634|FBtr0089758|FBtr0339428|FBtr0089759 10137011|10137011|10137011|10137011 10137472|10137472|10137472|10137472 2R + 10137172 10137239 3'utr gem FlyBase G14610.1 AGCAAGCAGCCTCTAACCCTGTTCCCTAAAATCTTTGTTAAAGAACTAGTGCAAAATATTTAAGTTTC 59 10137218 0.919208087 6 56 351 0.973684211 1.568201724 0 0.220338983 0.394736842 59 1 1 74 2R:10137172-10137239 6 gem FBtr0339428|FBtr0089759|FBtr0346634|FBtr0089758 10137011|10137011|10137011|10137011 10137472|10137472|10137472|10137472 GTGCAA 6mer3-8 dme-miR-92b-3p 2R + 10137114 10137238 3'utr gem FlyBase G11115.1 TTTCTATATAGGTTTTAATTTGTATGAGATTTCGCGCAGCAATTTTGAACAAGTAAAAAGCAAGCAGCCTCTAACCCTGTTCCCTAAAATCTTTGTTAAAGAACTAGTGCAAAATATTTAAGTTT 30 10137218 0.9808813 7 27 193 0.911764706 1.491361694 0.088235294 0.172413793 0.294117647 29 3 0 31 2R:10137114-10137238 6 28 952 FBgn0050011 3271.46 66.12333333 101.57 0.00855887 0.423451127 0.27567195 2 2 2 0.1 dme-miR-317-3p 8mer-A1 TGTGTTCA 2R 10145966 10145973 - 2R_10145966_10145973_- 0.63113675 0.631136735 0.631136742 0 KCNQ FBtr0310097|FBtr0310094|FBtr0299833|FBtr0301443|FBtr0310096|FBtr0310093|FBtr0310095|FBtr0301444 10145895|10145895|10145895|10145895|10145895|10145895|10145895|10145895 10146074|10146074|10146074|10146074|10146074|10146074|10146074|10146074 2R - 10145934 10145989 3'utr KCNQ FlyBase G21678.1 ATTTTGGGACATCATTTGTGTTCAATTAATTGGTAGCAAACAAATGAAAATCAAAC 6 10145974 0.990604435 3 6 60 1 0.77815125 0.166666667 0 0 6 0 0 6 2R:10145934-10145989 8 KCNQ FBtr0310096|FBtr0310093|FBtr0310095|FBtr0301444|FBtr0310097|FBtr0310094|FBtr0299833|FBtr0301443 10145895|10145895|10145895|10145895|10145895|10145895|10145895|10145895 10146074|10146074|10146074|10146074|10146074|10146074|10146074|10146074 TGTGTTCA 8mer-A1 dme-miR-317-3p 2R - 10145935 10145988 3'utr KCNQ FlyBase G16451.1 TTTTGGGACATCATTTGTGTTCAATTAATTGGTAGCAAACAAATGAAAATCAAA 7 10145974 0.987785899 4 7 55 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 2R:10145935-10145988 8 4.5 953 FBgn0033494 83.10666667 3.453333333 5.296666667 0.054147281 1.303088803 0.849590938 1 1 1 0.1 dme-bantam-3p 6mer3-8 TGATCT 2R 10156573 10156578 - 2R_10156573_10156578_- 0.989302359 0.984114499 0.986708429 0.003668399 mlt FBtr0088370|FBtr0331945|FBtr0088369 10156388|10155914|10156388 10156669|10156669|10156669 2R - 10156567 10156607 3'utr mlt FlyBase G21682.1 CTTCGTCCCCCGCCTGGTGCTACAACTTGTGATCTTGTACA 18 10156581 0.64123762 6 18 151 1 1.397940009 0.4 0.333333333 0.52 18 0 0 25 2R:10156567-10156607 6 mlt FBtr0331945|FBtr0088369|FBtr0088370 10155914|10156388|10156388 10156669|10156669|10156669 TGATCT 6mer3-8 dme-bantam-3p 2R - 10156569 10156592 3'utr mlt FlyBase G16454.1 GGTGCTACAACTTGTGATCTTGTA 10 10156572 0.675230975 4 8 74 0.833333333 0.698970004 0.416666667 0.2 0.333333333 10 1 1 10 2R:10156569-10156592 6 14 954 FBgn0265512 12.66666667 0.613333333 0.95 1.105263158 22.82608696 14.73684211 3 -6 -1.5 0.1 dme-miR-283-5p 8mer-m1 TGATATTT 2R 10307099 10307106 - 2R_10307099_10307106_- 0.489388081 0.495987826 0.492687953 0.004666693 JhI-1 FBtr0088360 10307028 10307304 2R - 10307089 10307145 3'utr JhI-1 FlyBase G21693.1 AATTAATAGGGCACCTTTGCTTGTATCTGTATATGCTTGTGATATTTGCATTTGCAT 26 10307109 0.993419074 8 22 278 0.805555556 0.763427994 0.194444444 0.346153846 0.527777778 26 3 4 29 2R:10307089-10307145 8 JhI-1 FBtr0088360 10307028 10307304 TGATATTT 8mer-m1 dme-miR-283-5p 2R - 10307090 10307121 3'utr JhI-1 FlyBase G16459.1 ATCTGTATATGCTTGTGATATTTGCATTTGCA 15 10307109 0.675132212 6 13 142 0.857142857 0.653212514 0.19047619 0.333333333 0.523809524 15 0 3 18 2R:10307090-10307121 8 18.5 955 FBgn0028426 503.2766667 22.61333333 34.73333333 0.036759105 0.818101415 0.532629559 3 3 3 0.1 dme-miR-986-5p 7mer-A1 TTCGAGA 2R 10435706 10435712 + 2R_10435706_10435712_+ 0.629131211 0.688737333 0.658934272 0.042147878 RanBPM FBtr0088262|FBtr0100460|FBtr0306247|FBtr0088263 10435221|10435221|10435221|10435221 10436416|10436581|10436581|10436581 2R + 10435686 10435741 3'utr RanBPM FlyBase G14657.2 TCGTCGATCCGCAGGACTTCTTCGAGACACTGGACTAAATTTAGATTATTTACAAT 415 10435716 0.967096361 7 408 3151 0.984682713 2.176091259 0.015317287 0.091566265 0.175054705 415 5 2 450 2R:10435686-10435741 7 RanBPM FBtr0306247|FBtr0088263|FBtr0100460|FBtr0088262 10435221|10435221|10435221|10435221 10436581|10436581|10436581|10436416 TTCGAGA 7mer-A1 dme-miR-986-5p 2R + 10435666 10435741 3'utr RanBPM FlyBase G11156.1 AAACAGCAGCCCATCGATGTTCGTCGATCCGCAGGACTTCTTCGAGACACTGGACTAAATTTAGATTATTTACAAT 287 10435716 0.98403498 8 283 2085 0.992592593 2.604226053 0.022222222 0.324041812 0.520987654 287 3 0 402 2R:10435666-10435741 7 340 956 FBgn0262114 1559 49.81 76.34333333 0.218088518 6.825938567 4.453565035 -10 -10 -10 0.1 dme-miR-965-3p 8mer-A1 TACGCTTA 2R 10469472 10469479 + 2R_10469472_10469479_+ 0.625364919 0.625364919 0.625364919 0 CG11777 FBtr0088273 10469445 10469643 2R + 10469375 10469489 stop_codon CG11777 FlyBase G14666.1 AAGAACTATCGTCCCCATGTGGACAAGAAGATCAATGGAGTAACTATACATGCCAATCCTTTGGCGACGTGATAGAGATAGAGACAAAGGCCAATCGTACGCTTAAAATGAAATA 26 10469470 0.94123465 13 26 99 1 1.491361694 0.129032258 0.192307692 0.322580645 26 0 0 31 2R:10469375-10469489 8 CG11777 FBtr0088273 10469445 10469643 TACGCTTA 8mer-A1 dme-miR-965-3p 2R + 10469432 10469486 stop_codon CG11777 FlyBase G11166.1 CCTTTGGCGACGTGATAGAGATAGAGACAAAGGCCAATCGTACGCTTAAAATGAA 17 10469471 0.907770258 4 13 57 0.857142857 0.954242509 0.142857143 0.235294118 0.380952381 17 2 1 18 2R:10469432-10469486 8 8.5 957 FBgn0033527 170.1366667 31.64666667 48.74 0.049959836 0.268590689 0.174394748 2 1 1.5 0.1 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 10481832 10481839 + 2R_10481832_10481839_+ 0.605654049 0.603525233 0.604589641 0.001505289 CG17765 FBtr0088274 10481588 10481886 2R + 10481747 10481856 3'utr CG17765 FlyBase G14674.2 ATCACTCCACAGTCATATTGCAATCTCCTGGTATCAGAATCAAATTTCAAAAGTATTTGTTAACGCAGTTCGACTCAATAATCATAGTACAAAGTCTCTTGCGCCTAATA 47 10481830 0.979817235 12 44 323 0.948275862 1.740362689 0.103448276 0.191489362 0.344827586 47 3 0 55 2R:10481747-10481856 8 CG17765 FBtr0088274 10481588 10481886 AGTACAAA 8mer-A1 dme-miR-305-5p 2R + 10481660 10481855 3'utr CG17765 FlyBase G11170.1 ACAGCCAACAGTGGATGATCATAAATTTCGCGACTGGTGCATTTTTCTTAAATTTTCAACGGTGTTAGCTTTTTAATATGTAAATGAATCACTCCACAGTCATATTGCAATCTCCTGGTATCAGAATCAAATTTCAAAAGTATTTGTTAACGCAGTTCGACTCAATAATCATAGTACAAAGTCTCTTGCGCCTAAT 36 10481830 0.984866267 19 35 289 0.98 1.69019608 0.12 0.25 0.46 36 1 0 49 2R:10481660-10481855 8 22 958 FBgn0033529 2313.66 293.68 451.0566667 0.009508744 0.074911468 0.048774359 2 2 2 0.1 dme-miR-31a-5p 8mer-A1 TCTTGCCA 2R 10491536 10491543 - 2R_10491536_10491543_- 0.605923164 0.631133832 0.618528498 0.017826586 lola FBtr0089361 10491258 10491941 2R - 10491523 10491581 5'utr lola FlyBase G21738.1 TAGTTCTACTGTGGTTGGTGTTCTCAAAACTCAAATATTCTTGCCAGCAATTAGGGCTT 11 10491544 0.982935464 5 10 82 0.916666667 1.041392685 0.083333333 0.090909091 0.166666667 11 1 0 11 2R:10491523-10491581 8 lola FBtr0089361 10491258 10491941 TCTTGCCA 8mer-A1 dme-miR-31a-5p 2R - 10491534 10491578 5'utr lola FlyBase G16492.1 TTCTACTGTGGTTGGTGTTCTCAAAACTCAAATATTCTTGCCAGC 6 10491544 0.982279788 3 5 40 0.888888889 0.602059991 0 0.333333333 0.555555556 6 0 1 8 2R:10491534-10491578 8 5.5 959 FBgn0005630 6593.74 266.74 407.4566667 0.000834124 0.02061933 0.013498368 1 1 1 0.1 dme-bantam-3p 8mer-A1 TGATCTCA 2R 10496614 10496621 - 2R_10496614_10496621_- 0.631136035 0.631136149 0.631136092 7.07E-08 lola FBtr0089360 10496293 10497178 2R - 10496594 10496646 5'utr lola FlyBase G21752.1 TGTATAAATCCTTAGGAAAACTCAATGATCTCAATGAACTTTTTCTTGATTTT 473 10496621 0.767112619 8 457 2259 0.964028777 1.72916479 0.215827338 0.150105708 0.276978417 473 11 9 536 2R:10496594-10496646 8 lola FBtr0089360 10496293 10497178 TGATCTCA 8mer-A1 dme-bantam-3p 2R - 10496595 10496650 5'utr lola FlyBase G16503.1 GATGTGTATAAATCCTTAGGAAAACTCAATGATCTCAATGAACTTTTTCTTGATTT 375 10496621 0.763432461 6 366 1827 0.97810219 2.030194785 0.260948905 0.309333333 0.527372263 375 8 4 536 2R:10496595-10496650 8 422.5 960 FBgn0005630 6593.74 266.74 407.4566667 0.064075927 1.583939417 1.036920081 0 0 0 0.1 dme-bantam-3p 6mer3-8 TGATCT 2R 10496953 10496958 - 2R_10496953_10496958_- 0.999909887 0.99991203 0.999910959 1.48E-06 lola FBtr0089360 10496293 10497178 2R - 10496929 10497062 5'utr lola FlyBase G21753.1 AGGTTTCGGGTCCTTAGTGCCGGGTTTGCTTCAGTCTGAGTCCAAAGTCCTAATCACACAGAGTTCAGTCCAGTCCAGAGCGCGGTTTTGTGTAATTTTCCAAATGATCTTGAAACATATAGTCGTCTTTACAC 125 10496958 0.979930108 14 122 852 0.979310345 2.152288344 0.103448276 0.152 0.268965517 125 3 0 142 2R:10496929-10497062 6 lola FBtr0089360 10496293 10497178 TGATCT 6mer3-8 dme-bantam-3p 2R - 10496931 10497019 5'utr lola FlyBase G16504.1 AAAGTCCTAATCACACAGAGTTCAGTCCAGTCCAGAGCGCGGTTTTGTGTAATTTTCCAAATGATCTTGAAACATATAGTCGTCTTTAC 95 10496958 0.846201207 12 95 650 1 2.100370545 0.023809524 0.273684211 0.452380952 95 0 0 126 2R:10496931-10497019 6 87 961 FBgn0005630 6593.74 266.74 407.4566667 0.013194333 0.326160306 0.213519638 0 0 0 0.1 dme-miR-282-5p 6mer2-7 GAGGCT 2R 10507648 10507653 - 2R_10507648_10507653_- 0.999999941 0.999999655 0.999999798 1.41E-07 lola FBtr0343132|FBtr0089350 10507241|10507421 10508346|10508346 2R - 10507630 10507688 5'utr lola FlyBase G21774.1 AAAAATTGAAGAAAATTGTAAACTTATCTATATTGGAGGCTTGCAAAAATAATTTTGTA 106 10507655 0.982049653 8 104 801 0.985507246 2.133538908 0 0.283018868 0.449275362 106 2 0 136 2R:10507630-10507688 6 lola FBtr0089350|FBtr0343132 10507421|10507241 10508346|10508346 GAGGCT 6mer2-7 dme-miR-282-5p 2R - 10507625 10507671 5'utr lola FlyBase G16523.1 GTAAACTTATCTATATTGGAGGCTTGCAAAAATAATTTTGTAAGAAT 81 10507655 0.799882612 4 79 595 1 2.08278537 0.008264463 0.3875 0.595041322 80 0 0 121 2R:10507625-10507671 6 91 962 FBgn0005630 6593.74 266.74 407.4566667 0.013800969 0.341156182 0.223336633 2 2 2 0.1 dme-miR-1006-3p 8mer-A1 CGAATTTA 2R 10515275 10515282 - 2R_10515275_10515282_- 0.660661538 0.45058987 0.555625704 0.148543053 lola FBtr0089348 10515012 10515540 2R - 10515233 10515285 5'utr lola FlyBase G21802.1 AAACGAATTTATTGGATGCCACATCATTTATAAAGGAAATGGATAAAAAAAAA 11 10515274 0.988323061 5 8 70 0.6875 1.041392685 0.1875 0.454545455 0.625 11 5 0 11 2R:10515233-10515285 8 lola FBtr0089348 10515012 10515540 CGAATTTA 8mer-A1 dme-miR-1006-3p 2R - 10515251 10515284 5'utr lola FlyBase G16539.1 AACGAATTTATTGGATGCCACATCATTTATAAAG 9 10515273 0.708628328 2 9 58 1 1.079181246 0.25 0.333333333 0.5 9 0 0 12 2R:10515251-10515284 8 9 963 FBgn0005630 6593.74 266.74 407.4566667 0.001364931 0.033740721 0.022088238 -8 -9 -8.5 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA 2R 10515463 10515468 - 2R_10515463_10515468_- 0.999999965 0.865983017 0.932991491 0.094764329 lola FBtr0089348 10515012 10515540 2R - 10515423 10515601 stop_codon lola FlyBase G21804.1 ACAAAGCTCCCACCTAAAGCGACACCTTGAGAGCGGTGTCTGTGTCAAATATTACTTATGAGATAATGTTTTCTTTAAAATCAAATAGAATAAGCGTTATCCCAATAGGCAGAAGATCAACTGATGATCGAAATGATGATCATGAAAATGAAGATGTAGAACATGAACAAGATTATATA 38 10515467 0.969055673 16 37 211 0.97826087 1.653212514 0.239130435 0.184210526 0.326086957 38 1 0 45 2R:10515423-10515601 6 lola FBtr0089348 10515012 10515540 TGATGA 6mer3-8 dme-miR-2a-2-5p 2R - 10515452 10515495 5'utr lola FlyBase G16540.1 AGGCAGAAGATCAACTGATGATCGAAATGATGATCATGAAAATG 6 10515467 0.944063275 3 6 26 1 0.954242509 0.333333333 0.333333333 0.555555556 6 0 0 9 2R:10515452-10515495 6 8 964 FBgn0005630 6593.74 266.74 407.4566667 0.001213272 0.029991752 0.01963399 -1 -1 -1 0.1 dme-miR-1003-3p 7mer-A1 TGTGAGA 2R 10615726 10615732 + 2R_10615726_10615732_+ 0.814154775 0.813346037 0.813750406 0.000571908 psq FBtr0088278|FBtr0346958|FBtr0088282|FBtr0330607|FBtr0100606|FBtr0088281|FBtr0088277|FBtr0088276|FBtr0088275|FBtr0100607|FBtr0088280|FBtr0088279 10614840|10614840|10614840|10615080|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840 10616248|10617280|10616248|10617280|10616248|10616248|10616248|10616248|10616248|10616248|10616248|10616248 2R + 10615703 10615790 3'utr psq FlyBase G14696.1 GCTTTGTTATAATTTTCGCTTAGTGTGAGACTGAAAGTGCGCCTAAAACTGTTGAAAAACCCCATGCCCAATATTATAGTGAAGACGC 377 10615728 0.968846894 15 358 2591 0.947867299 1.903089987 0.462085308 0.103448276 0.199052133 377 18 4 400 2R:10615703-10615790 7 psq FBtr0088275|FBtr0088280|FBtr0088277|FBtr0100607|FBtr0088276|FBtr0088279|FBtr0100606|FBtr0088281|FBtr0088278|FBtr0346958|FBtr0088282|FBtr0330607 10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10615080 10616248|10616248|10616248|10616248|10616248|10616248|10616248|10616248|10616248|10617280|10616248|10617280 TGTGAGA 7mer-A1 dme-miR-1003-3p 2R + 10615704 10615758 3'utr psq FlyBase G11187.1 CTTTGTTATAATTTTCGCTTAGTGTGAGACTGAAAGTGCGCCTAAAACTGTTGAA 196 10615728 0.846520173 10 175 1334 0.904761905 1.822821645 0.510204082 0.397959184 0.598639456 196 25 3 266 2R:10615704-10615758 7 267.5 965 FBgn0263102 4429.833333 90.05333333 137.5466667 0.060386019 2.970461948 1.944794494 -2 -2 -2 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 10615884 10615889 + 2R_10615884_10615889_+ 0.99993489 0.999990777 0.999962834 3.95E-05 psq FBtr0088278|FBtr0346958|FBtr0088282|FBtr0330607|FBtr0100606|FBtr0088281|FBtr0088277|FBtr0088276|FBtr0088275|FBtr0100607|FBtr0088280|FBtr0088279 10614840|10614840|10614840|10615080|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840 10616248|10617280|10616248|10617280|10616248|10616248|10616248|10616248|10616248|10616248|10616248|10616248 2R + 10615870 10615929 3'utr psq FlyBase G14697.2 TAACGTAGAATTAAACCAAATTATCAAGGTTCTAGAACTTAAATCATTAGCTTGTAACGA 56 10615893 0.718426822 9 53 407 0.951612903 1.469822016 0.129032258 0.107142857 0.193548387 56 2 1 59 2R:10615870-10615929 6 psq FBtr0088275|FBtr0088280|FBtr0088277|FBtr0100607|FBtr0088276|FBtr0088279|FBtr0100606|FBtr0088281|FBtr0088278|FBtr0346958|FBtr0088282|FBtr0330607 10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10615080 10616248|10616248|10616248|10616248|10616248|10616248|10616248|10616248|10616248|10617280|10616248|10617280 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 10615807 10615916 3'utr psq FlyBase G11188.1 ACATGAATCAAATGCTTTATAACCATATTGTTTGAACAGATAGAACGAAGTGGGAGAATACCTTAACGTAGAATTAAACCAAATTATCAAGGTTCTAGAACTTAAATCAT 44 10615892 0.982648134 11 41 306 0.968253968 1.785329835 0.206349206 0.295454545 0.507936508 44 2 0 61 2R:10615807-10615916 6 43 966 FBgn0263102 4429.833333 90.05333333 137.5466667 0.009706911 0.477494818 0.312621171 -9 -8 -8.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2R 10640934 10640939 + 2R_10640934_10640939_+ 0.999408282 0.999693069 0.999550675 0.000201384 CG11883 FBtr0113063|FBtr0088284|FBtr0339461|FBtr0088283 10640587|10640725|10640587|10640587 10640990|10640990|10641807|10640990 2R + 10640818 10640957 3'utr CG11883 FlyBase G14708.1 GTTTATTGTTAATGCTCCACTGTTTTTTTCGGCTAAGTTTCGTTGTGAACGTTTGTAAGACTTCCCCAGAGATATTGATATTGATATTGTATATGATGCATGTGTAGTGAGTACGTGTACCTAAAGCTTACCGCTAGTTT 80 10640933 0.917121354 11 78 632 0.978021978 1.648360011 0.230769231 0.1125 0.21978022 80 1 1 89 2R:10640818-10640957 6 CG11883 FBtr0088283|FBtr0339461|FBtr0088284|FBtr0113063 10640587|10640587|10640725|10640587 10640990|10641807|10640990|10640990 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2R + 10640911 10640955 3'utr CG11883 FlyBase G11195.2 TGATGCATGTGTAGTGAGTACGTGTACCTAAAGCTTACCGCTAGT 25 10640933 0.807858948 4 24 144 0.970588235 1.51851394 0 0.32 0.5 25 1 0 33 2R:10640911-10640955 6 29 967 FBgn0033538 276.0933333 9.15 14.24666667 0.105036944 3.169398907 2.035563875 1 1 1 0.1 dme-miR-34-5p 6mer2-7 ACTGCC 2R 10737392 10737397 + 2R_10737392_10737397_+ 0.967249198 0.938439856 0.952844527 0.020371251 CG7220 FBtr0088216|FBtr0088217|FBtr0339465|FBtr0088219 10737369|10737369|10737369|10737369 10738370|10738370|10738370|10738370 2R + 10737378 10737432 5'utr-coding CG7220 FlyBase G14718.1 TGCCATTTACTAATACTGCCTGCTATTGTTTGCTTTGCGCATCCAACCAAAAAAA 15 10737391 0.988080887 6 14 139 0.863636364 0.67669361 0.045454545 0.2 0.454545455 15 0 3 19 2R:10737378-10737432 6 CG7220 FBtr0339465|FBtr0088219|FBtr0088216|FBtr0088217 10737369|10737369|10737369|10737369 10738370|10738370|10738370|10738370 ACTGCC 6mer2-7 dme-miR-34-5p 2R + 10737363 10737424 stop_codon CG7220 FlyBase G11200.1 CTGTTTAGTTAAAATTGCCATTTACTAATACTGCCTGCTATTGTTTGCTTTGCGCATCCAAC 10 10737390 0.986760763 7 10 90 1 1.176091259 0 0.3 0.533333333 10 0 0 15 2R:10737363-10737424 6 10 968 FBgn0033544 368.3233333 29.77 45.41666667 0.027150058 0.335908633 0.220183486 1 2 1.5 0.1 dme-miR-999-3p 6mer3-8 AGTTAA 2R 10737984 10737989 + 2R_10737984_10737989_+ 0.999999913 0.99993759 0.999968751 4.41E-05 CG7220 FBtr0088216|FBtr0088217|FBtr0339465|FBtr0088219 10737369|10737369|10737369|10737369 10738370|10738370|10738370|10738370 2R + 10737959 10737998 3'utr CG7220 FlyBase G14722.1 TGAGAAGCAAAACTCATGCGATCATAGTTAAGATTATGAC 8 10737975 0.953794436 2 8 43 1 1.041392685 0.272727273 0.25 0.454545455 8 0 0 11 2R:10737959-10737998 6 CG7220 FBtr0339465|FBtr0088219|FBtr0088216|FBtr0088217 10737369|10737369|10737369|10737369 10738370|10738370|10738370|10738370 AGTTAA 6mer3-8 dme-miR-999-3p 2R + 10737973 10738050 3'utr CG7220 FlyBase G11202.1 CATGCGATCATAGTTAAGATTATGACATTTTAAATGTATTAGCAGCCATATCCCCGATCGCTCTCATTGTCACCAGTC 12 10737986 0.979170694 9 10 75 0.882352941 1.176091259 0.411764706 0.333333333 0.529411765 12 2 0 15 2R:10737973-10738050 6 5.5 969 FBgn0033544 368.3233333 29.77 45.41666667 0.014932532 0.184749748 0.121100917 9 -2 3.5 0.1 dme-miR-965-3p 7mer-A1 ACGCTTA 2R 10738705 10738711 - 2R_10738705_10738711_- 0.823349562 0.823349562 0.823349562 0 Mat1 FBtr0088255 10738615 10738757 2R - 10738666 10738747 3'utr Mat1 FlyBase G21856.1 AAATATCCTTTAATGGTCGCACAACCAGAGCACTGAACGCTTAATTTTGTTGAACAAATGTGTCCTATACGAATCCATTCAG 53 10738703 0.967739616 10 51 303 0.95 1.755874856 0.116666667 0.113207547 0.216666667 53 3 0 57 2R:10738666-10738747 7 Mat1 FBtr0088255 10738615 10738757 ACGCTTA 7mer-A1 dme-miR-965-3p 2R - 10738625 10738736 3'utr Mat1 FlyBase G16585.1 AATGGTCGCACAACCAGAGCACTGAACGCTTAATTTTGTTGAACAAATGTGTCCTATACGAATCCATTCAGTTAACTCGTAACTTAATATATGTTAAATAAATAAATGCTAT 54 10738703 0.760862295 14 53 312 0.987951807 1.612783857 0.048192771 0.37037037 0.590361446 54 0 1 82 2R:10738625-10738736 7 43 970 FBgn0024956 305.3266667 31.30333333 48.17 0.140832769 1.373655628 0.892671787 -8 -8 -8 0.1 dme-miR-7-5p 6mer2-7 TCTTCC 2R 10740586 10740591 - 2R_10740586_10740591_- 0.99996711 1 0.999983555 2.33E-05 CG33144 FBtr0088254|FBtr0302517 10740394|10740052 10740928|10740928 2R - 10740532 10740612 3'utr CG33144 FlyBase G21863.1 CTGTATAAATCGAGTAGGTTCTCTTCCTAGCGCATAAGTTAGTCTAAATATATTAGGAGTACGCCTCGTATTGCAACAGTG 11 10740589 0.766086641 3 10 91 0.923076923 1.079181246 0.153846154 0.181818182 0.307692308 11 1 0 12 2R:10740532-10740612 6 CG33144 FBtr0302517|FBtr0088254 10740052|10740394 10740928|10740928 TCTTCC 6mer2-7 dme-miR-7-5p 2R - 10740578 10740608 3'utr CG33144 FlyBase G16589.1 ATAAATCGAGTAGGTTCTCTTCCTAGCGCAT 5 10740590 0.932209028 3 4 29 0.833333333 0.698970004 0.333333333 0.2 0.333333333 5 1 0 5 2R:10740578-10740608 6 6 971 FBgn0053144 479.6233333 12.36 18.86333333 0.012509817 0.485436893 0.318077399 -2 -1 -1.5 0.1 dme-miR-283-5p 8mer-m1 TGATATTT 2R 10740761 10740768 - 2R_10740761_10740768_- 0.532599216 0.54247161 0.537535413 0.006980841 CG33144 FBtr0088254|FBtr0302517 10740394|10740052 10740928|10740928 2R - 10740705 10740808 3'utr CG33144 FlyBase G21864.1 AGTTATTACAATTATAATTGTATATGTGTTAACTAAATTGTGATATTTACAGTGATTCGATTTCTAATTGAATCGACAAATTTGTTGAGAACCTATACAAAGAC 118 10740771 0.99070226 17 110 1145 0.946666667 1.45331834 0.573333333 0.220338983 0.386666667 118 4 4 142 2R:10740705-10740808 8 CG33144 FBtr0302517|FBtr0088254 10740052|10740394 10740928|10740928 TGATATTT 8mer-m1 dme-miR-283-5p 2R - 10740732 10740882 3'utr CG33144 FlyBase G16590.1 AGCCTGTAAATGCAGCTGCTGTAATTACTGGTAGTTTCTATTGTTAATGACGACAGCTTACGTACATTTATTTTAGTTATTACAATTATAATTGTATATGTGTTAACTAAATTGTGATATTTACAGTGATTCGATTTCTAATTGAATCGAC 94 10740771 0.990140207 20 90 895 0.950704225 2.130333768 0.521126761 0.361702128 0.577464789 94 7 0 135 2R:10740732-10740882 8 95 972 FBgn0053144 479.6233333 12.36 18.86333333 0.198072098 7.686084142 5.036225482 3 3 3 0.1 dme-bantam-3p 6mer3-8 TGATCT 2R 10815752 10815757 + 2R_10815752_10815757_+ 0.999994237 0.999994816 0.999994526 4.24E-07 CG7222 FBtr0088223|FBtr0345945 10815109|10815109 10815781|10815781 2R + 10815711 10815807 3'utr CG7222 FlyBase G14735.1 ATACAGAGTTCATAAGCCGCATGTCTATCAAAACACCAAAATGATCTGTTATCAATAAATATATGTACTTGACATTCTGATATTTACACATGCATAA 282 10815752 0.908737901 17 275 1699 0.973529412 2.042706739 0.017647059 0.187943262 0.326470588 282 7 2 331 2R:10815711-10815807 6 CG7222 FBtr0088223|FBtr0345945 10815109|10815109 10815781|10815781 TGATCT 6mer3-8 dme-bantam-3p 2R + 10815729 10815797 3'utr CG7222 FlyBase G11215.1 GCATGTCTATCAAAACACCAAAATGATCTGTTATCAATAAATATATGTACTTGACATTCTGATATTTAC 149 10815752 0.899534462 9 144 862 0.958333333 2.315970345 0.009259259 0.33557047 0.541666667 149 9 0 207 2R:10815729-10815797 6 199 973 FBgn0033551 801.0633333 64.22666667 98.17333333 0.248419809 3.098401495 2.027027027 0 0 0 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 10839439 10839444 - 2R_10839439_10839444_- 0.755363009 0.755363009 0.755363009 0 CG30015 FBtr0113357|FBtr0113357|FBtr0113357|FBtr0306393|FBtr0306393|FBtr0306393|FBtr0331939|FBtr0331939|FBtr0331939|FBtr0088243|FBtr0088243|FBtr0088243|FBtr0113356|FBtr0113356|FBtr0113356|FBtr0331938|FBtr0331938|FBtr0331938|FBtr0088242|FBtr0088242|FBtr0088242 10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100 10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902 2R - 10839314 10839518 3'utr CG30015 FlyBase G21898.1 CTGTGCATGTCGAAAAATGTTTTGAAATAAACTAAATTACGTCTATTAATTGAGAGTCAAGAAAACTGTAAGGACTGTGAGTATAATTACGCGTAGCAAGGAGCCTGATATTCGAAACATTTGATTTACTTTAAGTTGATAATTTGCAAGCTTTTAATTGGTAGAAGAGATTGATTTTACTATTTAGACTAACTATTATTACTTA 61 10839451 0.980851047 19 54 398 0.918918919 1.531478917 0.202702703 0.163934426 0.310810811 61 5 1 68 2R:10839314-10839518 6 CG30015 FBtr0331939|FBtr0331939|FBtr0331939|FBtr0306393|FBtr0306393|FBtr0306393|FBtr0113357|FBtr0113357|FBtr0113357|FBtr0088242|FBtr0088242|FBtr0088242|FBtr0331938|FBtr0331938|FBtr0331938|FBtr0113356|FBtr0113356|FBtr0113356|FBtr0088243|FBtr0088243|FBtr0088243 10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100 10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 10839349 10839480 3'utr CG30015 FlyBase G16612.1 ACGTCTATTAATTGAGAGTCAAGAAAACTGTAAGGACTGTGAGTATAATTACGCGTAGCAAGGAGCCTGATATTCGAAACATTTGATTTACTTTAAGTTGATAATTTGCAAGCTTTTAATTGGTAGAAGAGA 45 10839441 0.971497802 14 38 236 0.884057971 1.484299839 0.202898551 0.422222222 0.623188406 45 7 1 61 2R:10839349-10839480 6 31.5 974 FBgn0050015 810.93 16.1 24.71 0.03884429 1.956521739 1.274787535 7 -3 2 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2R 10839852 10839857 - 2R_10839852_10839857_- 0.994288877 0.999502042 0.996895459 0.003686218 CG30015 FBtr0113357|FBtr0306393|FBtr0331939|FBtr0088243|FBtr0113356|FBtr0331938|FBtr0088242 10839100|10839100|10839100|10839100|10839100|10839100|10839100 10839902|10839902|10839902|10839902|10839902|10839902|10839902 2R - 10839799 10839879 3'utr CG30015 FlyBase G21902.1 TAAATACTCCGCCGACCAGACTGTACCTAGCCTAGCTGCAATCCAAGTGCTTTTGTCTAGTGATGCGCTCTCCTTCAAGCA 27 10839858 0.917414661 8 25 135 0.933333333 1.146128036 0.1 0.111111111 0.2 27 1 1 28 2R:10839799-10839879 6 CG30015 FBtr0331939|FBtr0306393|FBtr0113357|FBtr0088242|FBtr0331938|FBtr0113356|FBtr0088243 10839100|10839100|10839100|10839100|10839100|10839100|10839100 10839902|10839902|10839902|10839902|10839902|10839902|10839902 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2R - 10839825 10839875 3'utr CG30015 FlyBase G16614.1 TACTCCGCCGACCAGACTGTACCTAGCCTAGCTGCAATCCAAGTGCTTTTG 18 10839858 0.887153548 6 14 76 0.964285714 1.431363764 0.214285714 0.388888889 0.607142857 18 1 0 27 2R:10839825-10839875 6 15 975 FBgn0050015 810.93 16.1 24.71 0.018497281 0.931677019 0.607041684 1 1 1 0.1 dme-miR-307a-3p 7mer-A1 GTTGTGA 2R 10892582 10892588 + 2R_10892582_10892588_+ 0.82334873 0.741954869 0.7826518 0.057554108 CG30020 FBtr0088235|FBtr0339521 10892557|10892557 10893191|10892787 2R + 10892544 10892592 stop_codon CG30020 FlyBase G14783.1 AATGGGCAGCCCTAAGGAGCTGACGATAATTCCAAGTAGTTGTGAACTT 6 10892572 0.971432831 4 6 35 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2R:10892544-10892592 7 CG30020 FBtr0339521|FBtr0088235 10892557|10892557 10892787|10893191 GTTGTGA 7mer-A1 dme-miR-307a-3p 2R + 10892558 10892593 3'utr CG30020 FlyBase G11252.1 AGGAGCTGACGATAATTCCAAGTAGTTGTGAACTTA 7 10892573 0.984597105 4 5 44 0.705882353 0.602059991 0.117647059 1 1 7 3 2 12 2R:10892558-10892593 7 5.5 976 FBgn0050020 876.3433333 22.63666667 34.61333333 0.006276079 0.242968635 0.158898305 10 9 9.5 0.1 dme-miR-276a-3p 6mer2-7 GTTCCT 2R 10892656 10892661 + 2R_10892656_10892661_+ 0.999976662 0.999996599 0.999986631 1.41E-05 CG30020 FBtr0088235|FBtr0339521 10892557|10892557 10893191|10892787 2R + 10892617 10892678 3'utr CG30020 FlyBase G14784.1 AATCGCACAATGTACAAAGTTTGATATAGTCTAAGTACTGTTCCTCTCCATCATTTTAGCAC 27 10892658 0.953747423 9 24 219 0.9 0.954242509 0.166666667 0.074074074 0.166666667 27 1 2 27 2R:10892617-10892678 6 CG30020 FBtr0339521|FBtr0088235 10892557|10892557 10892787|10893191 GTTCCT 6mer2-7 dme-miR-276a-3p 2R + 10892614 10892674 3'utr CG30020 FlyBase G11253.1 AGTAATCGCACAATGTACAAAGTTTGATATAGTCTAAGTACTGTTCCTCTCCATCATTTTA 21 10892658 0.987162652 9 19 163 0.942857143 1.51851394 0.028571429 0.476190476 0.685714286 21 2 0 33 2R:10892614-10892674 6 19 977 FBgn0050020 876.3433333 22.63666667 34.61333333 0.021681 0.839346193 0.548921418 -2 -2 -2 0.1 dme-miR-970-3p 6mer3-8 TCTTAT 2R 10892735 10892740 + 2R_10892735_10892740_+ 0.999995777 0.999998089 0.999996933 1.63E-06 CG30020 FBtr0088235|FBtr0339521 10892557|10892557 10893191|10892787 2R + 10892698 10892750 3'utr CG30020 FlyBase G14785.1 TCTTGTTAAGTTCTAGACTAGGACATTAAACACAATCTCTTATACAAAATTAG 23 10892737 0.970543825 3 22 155 0.9375 1 0.03125 0.217391304 0.4375 23 0 2 30 2R:10892698-10892750 6 CG30020 FBtr0339521|FBtr0088235 10892557|10892557 10892787|10893191 TCTTAT 6mer3-8 dme-miR-970-3p 2R + 10892706 10892754 3'utr CG30020 FlyBase G11254.1 AGTTCTAGACTAGGACATTAAACACAATCTCTTATACAAAATTAGTTGA 19 10892737 0.685025049 5 19 129 1 1.397940009 0.04 0.210526316 0.4 19 0 0 25 2R:10892706-10892754 6 20.5 978 FBgn0050020 876.3433333 22.63666667 34.61333333 0.023392658 0.905610367 0.592257319 -2 -2 -2 0.1 dme-miR-34-5p 8mer-A1 CACTGCCA 2R 10982737 10982744 - 2R_10982737_10982744_- 0.678407973 0.678407973 0.678407973 0 luna FBtr0333066 10977954 10983297 2R - 10982717 10982767 3'utr luna FlyBase G21935.1 TTAATAATAATTTTGTTTTCATACACTGCCAAAATGAAAATGTAAAAAAAG 35 10982747 0.792800699 7 33 279 0.952380952 1.602059991 0.214285714 0.2 0.333333333 35 2 0 40 2R:10982717-10982767 8 luna FBtr0333066 10977954 10983297 CACTGCCA 8mer-A1 dme-miR-34-5p 2R - 10982726 10982762 3'utr luna FlyBase G16633.1 AATAATTTTGTTTTCATACACTGCCAAAATGAAAATG 24 10982747 0.750660855 7 24 161 1 1.505149978 0.5 0.291666667 0.46875 24 0 0 32 2R:10982726-10982762 8 29 979 FBgn0040765 1623.386667 50.45666667 77.46666667 0.017863889 0.574750611 0.374354561 3 3 3 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2R 10982848 10982854 - 2R_10982848_10982854_- 0.671795193 0.670553318 0.671174255 0.000878156 luna FBtr0333066|FBtr0088210|FBtr0345675 10977954|10982792|10982792 10983297|10983297|10983297 2R - 10982829 10982879 3'utr luna FlyBase G21936.1 AAACAGCAAAAATTGTGTACAATTTACCAAAGCTAAGCTGATTTCTTTAAT 20 10982855 0.946450111 4 17 119 0.92 1.361727836 0.36 0.2 0.36 20 2 0 23 2R:10982829-10982879 7 luna FBtr0333066|FBtr0088210|FBtr0345675 10977954|10982792|10982792 10983297|10983297|10983297 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 10982834 10982868 3'utr luna FlyBase G16634.1 ATTGTGTACAATTTACCAAAGCTAAGCTGATTTCT 10 10982855 0.676690805 5 9 63 0.923076923 1.079181246 0.538461538 0.3 0.461538462 10 1 0 12 2R:10982834-10982868 7 14.5 980 FBgn0040765 1623.386667 50.45666667 77.46666667 0.008931945 0.287375306 0.187177281 1 1 1 0.1 dme-miR-305-3p 7mer-A1 TGTGCCA 2R 10983211 10983217 - 2R_10983211_10983217_- 0.54539015 0.598452633 0.571921391 0.037520854 luna FBtr0333066|FBtr0088210|FBtr0345675 10977954|10982792|10982792 10983297|10983297|10983297 2R - 10983196 10983232 3'utr luna FlyBase G21937.1 ATCCAGCGGAAACTGTGTGCCATCAAGGAACGATGAA 12 10983217 0.912142406 2 11 37 0.916666667 1.041392685 0.166666667 0 0 12 1 0 11 2R:10983196-10983232 7 luna FBtr0333066|FBtr0088210|FBtr0345675 10977954|10982792|10982792 10983297|10983297|10983297 TGTGCCA 7mer-A1 dme-miR-305-3p 2R - 10983187 10983232 3'utr luna FlyBase G16636.1 ATCCAGCGGAAACTGTGTGCCATCAAGGAACGATGAAAAACTTGCG 8 10983217 0.882338161 4 7 19 0.9 0.954242509 0.5 0.125 0.3 8 1 0 9 2R:10983187-10983232 7 7.5 981 FBgn0040765 1623.386667 50.45666667 77.46666667 0.004619971 0.148642399 0.096815835 0 0 0 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA 2R 11147832 11147837 - 2R_11147832_11147837_- 0.998655318 0.999918407 0.999286863 0.000893147 CG12391 FBtr0088205 11147600 11147924 2R - 11147816 11147867 5'utr CG12391 FlyBase G21940.1 TTAAGTTTCTCTAGCTGTAGGAAGAATTCAGTGCAAATAAATCACATTTGTA 81 11147840 0.822628134 5 80 498 0.988888889 1.949390007 0.144444444 0.098765432 0.188888889 81 1 0 89 2R:11147816-11147867 6 CG12391 FBtr0088205 11147600 11147924 GTGCAA 6mer3-8 dme-miR-92b-3p 2R - 11147808 11147864 5'utr CG12391 FlyBase G16638.1 AGTTTCTCTAGCTGTAGGAAGAATTCAGTGCAAATAAATCACATTTGTAATAAATAC 32 11147840 0.967108588 5 32 174 1 1.672097858 0.170212766 0.34375 0.553191489 32 0 0 47 2R:11147808-11147864 6 55 982 FBgn0033581 833.3333333 42.62666667 65.30333333 0.066 1.29027213 0.84222347 3 3 3 0.1 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 1120763 1120769 + 2R_1120763_1120769_+ 0.823348684 0.823348675 0.823348679 0 rl FBtr0329920|FBtr0113700|FBtr0113702|FBtr0329919|FBtr0113703 1120749|1120749|1120749|1120749|1120749 1125927|1121107|1121107|1121771|1121107 2R + 1120739 1120786 stop_codon rl FlyBase G12499.1 AATGCGCCTTAAGAATGCGCTGTAAGCTTTAAGAATTTGAGTATATAG 13 1120761 0.984171241 3 10 85 0.888888889 1.204119983 0.222222222 0.230769231 0.444444444 13 2 0 16 2R:1120739-1120786 7 rl FBtr0113702|FBtr0329919|FBtr0329920|FBtr0113700|FBtr0113703 1120749|1120749|1120749|1120749|1120749 1121107|1121771|1125927|1121107|1121107 AGCTTTA 7mer-A1 dme-miR-79-3p 2R + 1120749 1120773 stop_codon rl FlyBase G9573.1 AAGAATGCGCTGTAAGCTTTAAGAA 6 1120761 0.714694217 2 6 30 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2R:1120749-1120773 7 9 983 FBgn0003256 2023.603333 112.5466667 172.76 0.004447512 0.079966829 0.052095392 2 2 2 0.1 dme-miR-11-3p 7mer-m1 TGTGATG 2R 1120957 1120963 + 2R_1120957_1120963_+ 0.612070854 0.612071005 0.61207093 7.07E-08 rl FBtr0329920|FBtr0113700|FBtr0113702|FBtr0329919|FBtr0113703 1120749|1120749|1120749|1120749|1120749 1125927|1121107|1121107|1121771|1121107 2R + 1120938 1120971 3'utr rl FlyBase G12500.1 GATAGGAACTTAAACTATGTGTGATGTTCGTAAA 8 1120955 0.741348628 2 7 67 0.888888889 0.903089987 0.111111111 0.125 0.222222222 8 1 0 8 2R:1120938-1120971 7 rl FBtr0113702|FBtr0329919|FBtr0329920|FBtr0113700|FBtr0113703 1120749|1120749|1120749|1120749|1120749 1121107|1121771|1125927|1121107|1121107 TGTGATG 7mer-m1 dme-miR-11-3p 2R + 1120936 1120968 3'utr rl FlyBase G9575.1 AAGATAGGAACTTAAACTATGTGTGATGTTCGT 6 1120955 0.936099245 2 6 48 1 1.041392685 0.363636364 0.5 0.727272727 6 0 0 11 2R:1120936-1120968 7 7 984 FBgn0003256 2023.603333 112.5466667 172.76 0.003459176 0.062196422 0.040518639 2 2 2 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2R 1121374 1121379 + 2R_1121374_1121379_+ 0.479481722 0.94337523 0.711428476 0.32802224 rl FBtr0329920|FBtr0329919 1120749|1120749 1125927|1121771 2R + 1121353 1121403 3'utr rl FlyBase G12501.1 CATAATTTAATGTGATTTATCAAGACTAGCAGGGTAAACCTTCCTTGGATG 7 1121397 0.957320673 4 7 45 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 2R:1121353-1121403 6 rl FBtr0329919|FBtr0329920 1120749|1120749 1121771|1125927 AAGACT 6mer3-8 dme-miR-14-3p 2R + 1121345 1121405 3'utr rl FlyBase G9576.1 AGTTATATCATAATTTAATGTGATTTATCAAGACTAGCAGGGTAAACCTTCCTTGGATGTT 8 1121369 0.987375139 4 6 62 0.642857143 0.954242509 0.285714286 0.375 0.642857143 8 5 0 9 2R:1121345-1121405 6 3 985 FBgn0003256 2023.603333 112.5466667 172.76 0.001482504 0.02665561 0.017365131 -23 5 -9 0.1 dme-miR-1006-3p 6mer3-8 CGAATT 2R 11216526 11216531 + 2R_11216526_11216531_+ 0.507197892 0.501678477 0.504438184 0.003902805 shn FBtr0330620|FBtr0330619|FBtr0088100|FBtr0088099|FBtr0088098|FBtr0088101 11216243|11216213|11216213|11216213|11216213|11216213 11217394|11217394|11217394|11217394|11217394|11217394 2R + 11216508 11216561 3'utr shn FlyBase G14853.1 CAGTGTAAACACTCTAGGCGAATTGCGCTAAAATAATCATATACAAAGCCTTTT 6 11216531 0.963667363 4 6 31 1 0.77815125 0 0 0 6 0 0 6 2R:11216508-11216561 6 shn FBtr0088098|FBtr0088101|FBtr0088100|FBtr0088099|FBtr0330620|FBtr0330619 11216213|11216213|11216213|11216213|11216243|11216213 11217394|11217394|11217394|11217394|11217394|11217394 CGAATT 6mer3-8 dme-miR-1006-3p 2R + 11216499 11216541 3'utr shn FlyBase G11298.1 CAGCTATTCCAGTGTAAACACTCTAGGCGAATTGCGCTAAAAT 6 11216531 0.967870401 3 5 25 0.6 0.77815125 0 0.333333333 0.6 6 4 0 6 2R:11216499-11216541 6 4 986 FBgn0003396 1305.2 16.31666667 25.01 0.003064664 0.24514811 0.159936026 -5 -5 -5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 11216752 11216757 + 2R_11216752_11216757_+ 0.710384761 0.71371927 0.712052016 0.002357848 shn FBtr0330620|FBtr0330620|FBtr0330620|FBtr0330619|FBtr0330619|FBtr0330619|FBtr0088100|FBtr0088100|FBtr0088100|FBtr0088099|FBtr0088099|FBtr0088099|FBtr0088098|FBtr0088098|FBtr0088098|FBtr0088101|FBtr0088101|FBtr0088101 11216243|11216243|11216243|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213 11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394 2R + 11216657 11216779 3'utr shn FlyBase G14854.2 GCCAACCAACGAGCACACTTATAAATCTATCTATATTGTATACACTTAACCATAATTTGTTTTCGAAATGCATAAATGCAAAAACTCCTGAAGTGCTGTGAGTCTATCTACAAATGTAAAGAT 118 11216750 0.783147818 17 101 729 0.874074074 1.469822016 0.125925926 0.13559322 0.244444444 118 14 3 118 2R:11216657-11216779 6 shn FBtr0088098|FBtr0088098|FBtr0088098|FBtr0088101|FBtr0088101|FBtr0088101|FBtr0088100|FBtr0088100|FBtr0088100|FBtr0088099|FBtr0088099|FBtr0088099|FBtr0330620|FBtr0330620|FBtr0330620|FBtr0330619|FBtr0330619|FBtr0330619 11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216243|11216243|11216243|11216213|11216213|11216213 11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 11216665 11216846 3'utr shn FlyBase G11299.2 ACGAGCACACTTATAAATCTATCTATATTGTATACACTTAACCATAATTTGTTTTCGAAATGCATAAATGCAAAAACTCCTGAAGTGCTGTGAGTCTATCTACAAATGTAAAGATCCGAGAGCGAGAGAAGTGTGTTATTTTTAAGGCCTAGCCCCGAAAATGAACCTCCAAACCGAACCAG 98 11216748 0.97152353 23 90 618 0.921052632 1.447158031 0.125 0.387755102 0.605263158 98 8 4 140 2R:11216665-11216846 6 72.5 987 FBgn0003396 1305.2 16.31666667 25.01 0.055547043 4.443309499 2.898840464 2 4 3 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 2R 11217197 11217203 + 2R_11217197_11217203_+ 0.78289675 0.782898626 0.782897688 1.27E-06 shn FBtr0330620|FBtr0330619|FBtr0088100|FBtr0088099|FBtr0088098|FBtr0088101 11216243|11216213|11216213|11216213|11216213|11216213 11217394|11217394|11217394|11217394|11217394|11217394 2R + 11217054 11217259 3'utr shn FlyBase G14858.1 TTTTAATTTTGTATTTGACAGAAGAGAAACGAAATGATGAAAAAAAACGCTAACTGTAAATAATCAATATGTTGTCATATATGCATTAAGCGGTAGGTTAGATAAACAAACTACACAAAGTTGATAGATATAAATGAAATATTGTACAAACTGCTATGGCAAGCGCTGCAGCAAAATCTATATATACACATAGATATATATCTATA 581 11217195 0.993823186 28 548 3732 0.944211994 1.985490629 0.337517434 0.179001721 0.334728033 581 34 6 677 2R:11217054-11217259 7 shn FBtr0088098|FBtr0088101|FBtr0088100|FBtr0088099|FBtr0330620|FBtr0330619 11216213|11216213|11216213|11216213|11216243|11216213 11217394|11217394|11217394|11217394|11217394|11217394 GTACAAA 7mer-A1 dme-miR-305-5p 2R + 11217161 11217227 3'utr shn FlyBase G11304.2 AAACTACACAAAGTTGATAGATATAAATGAAATATTGTACAAACTGCTATGGCAAGCGCTGCAGCAA 353 11217195 0.714874836 12 345 2208 0.984703633 2.012837225 0.363288719 0.35694051 0.565965583 353 4 4 515 2R:11217161-11217227 7 432 988 FBgn0003396 1305.2 16.31666667 25.01 0.330983757 26.47599591 17.27309076 2 2 2 0.1 dme-bantam-3p 6mer3-8 TGATCT 2R 11217302 11217307 + 2R_11217302_11217307_+ 1 1 1 0 shn FBtr0330620|FBtr0330619|FBtr0088100|FBtr0088099|FBtr0088098|FBtr0088101 11216243|11216213|11216213|11216213|11216213|11216213 11217394|11217394|11217394|11217394|11217394|11217394 2R + 11217279 11217329 3'utr shn FlyBase G14859.1 GGTTAAACAACAAGAAAATGAAGTGATCTATTACATTATTGTAAAATATAT 123 11217307 0.973741087 8 122 748 0.987096774 2.184691431 0.006451613 0.203252033 0.367741935 123 2 0 153 2R:11217279-11217329 6 shn FBtr0088098|FBtr0088101|FBtr0088100|FBtr0088099|FBtr0330620|FBtr0330619 11216213|11216213|11216213|11216213|11216243|11216213 11217394|11217394|11217394|11217394|11217394|11217394 TGATCT 6mer3-8 dme-bantam-3p 2R + 11217277 11217332 3'utr shn FlyBase G11305.1 GTGGTTAAACAACAAGAAAATGAAGTGATCTATTACATTATTGTAAAATATATCAA 99 11217297 0.978344205 10 94 629 0.96350365 1.643452676 0.04379562 0.313131313 0.503649635 99 3 2 132 2R:11217277-11217332 6 110.5 989 FBgn0003396 1305.2 16.31666667 25.01 0.084661355 6.772216547 4.418232707 -5 5 0 0.1 dme-miR-1008-3p 7mer-m8 AGCTGTG 2R 11226371 11226377 + 2R_11226371_11226377_+ 0.671734277 0.671201243 0.67146776 0.000376959 CG7737 FBtr0339479|FBtr0088105 11226115|11226115 11226746|11226746 2R + 11226344 11226392 3'utr CG7737 FlyBase G14869.1 TATGTCAACAAGTGCGCTGCCCAATAAAGCTGTGTTTAAGTCTTCTCTA 12 11226368 0.93717209 3 12 59 1 1.113943352 0.230769231 0.083333333 0.153846154 12 0 0 13 2R:11226344-11226392 7 CG7737 FBtr0339479|FBtr0088105 11226115|11226115 11226746|11226746 AGCTGTG 7mer-m8 dme-miR-1008-3p 2R + 11226338 11226390 3'utr CG7737 FlyBase G11312.1 TGTCAATATGTCAACAAGTGCGCTGCCCAATAAAGCTGTGTTTAAGTCTTCTC 13 11226368 0.779713142 5 11 63 0.954545455 1.322219295 0.227272727 0.538461538 0.727272727 13 1 0 21 2R:11226338-11226390 7 8 990 FBgn0033584 242.6633333 12.57333333 19.08 0.032967486 0.636267232 0.419287212 3 3 3 0.1 dme-miR-965-3p 6mer2-7 ACGCTT 2R 11226442 11226447 + 2R_11226442_11226447_+ 0.95988931 0.933400744 0.946645027 0.018730269 CG7737 FBtr0339479|FBtr0088105 11226115|11226115 11226746|11226746 2R + 11226429 11226467 3'utr CG7737 FlyBase G14870.1 AAGCTAATGAAAAACGCTTCCCTCTCAATCGCATTTAAA 25 11226446 0.847368907 2 25 126 1 1.505149978 0.15625 0.2 0.375 25 0 0 32 2R:11226429-11226467 6 CG7737 FBtr0339479|FBtr0088105 11226115|11226115 11226746|11226746 ACGCTT 6mer2-7 dme-miR-965-3p 2R + 11226429 11226460 3'utr CG7737 FlyBase G11313.1 AAGCTAATGAAAAACGCTTCCCTCTCAATCGC 15 11226446 0.83524243 2 15 72 1 1.255272505 0.055555556 0.2 0.333333333 15 0 0 18 2R:11226429-11226460 6 20 991 FBgn0033584 242.6633333 12.57333333 19.08 0.082418715 1.590668081 1.048218029 -4 -4 -4 0.1 dme-miR-252-5p 6mer3-8 GTACTT 2R 11226663 11226668 + 2R_11226663_11226668_+ 0.99490822 0.997902816 0.996405518 0.002117502 CG7737 FBtr0339479|FBtr0088105 11226115|11226115 11226746|11226746 2R + 11226601 11226690 3'utr CG7737 FlyBase G14871.1 GAGTGTATATACAACTGAGATACAATACGATTAGCTTTAGGTTTTACGGGGGGATTAACTCTGTACTTTGATTTCAACAACGTGTAATAC 24 11226668 0.984325135 6 24 191 1 1.477121255 0.066666667 0.25 0.4 24 0 0 30 2R:11226601-11226690 6 CG7737 FBtr0339479|FBtr0088105 11226115|11226115 11226746|11226746 GTACTT 6mer3-8 dme-miR-252-5p 2R + 11226655 11226684 3'utr CG7737 FlyBase G11315.1 TTAACTCTGTACTTTGATTTCAACAACGTG 14 11226668 0.688101187 3 14 113 1 1.204119983 0.125 0.142857143 0.25 14 0 0 16 2R:11226655-11226684 6 15 992 FBgn0033584 242.6633333 12.57333333 19.08 0.061814036 1.19300106 0.786163522 -5 -5 -5 0.1 dme-miR-11-3p 7mer-m1 TGTGATG 2R 1125300 1125306 + 2R_1125300_1125306_+ 0.612064372 0.612071115 0.612067743 4.74E-06 rl FBtr0329920|FBtr0345337 1120749|1125087 1125927|1125927 2R + 1125279 1125323 3'utr rl FlyBase G12503.1 AAGATAGGAACTTAAACTATGTGTGATGTTCGTAAAATGCAAAAC 12 1125298 0.689931011 3 12 94 1 1.146128036 0.357142857 0.166666667 0.285714286 12 0 0 14 2R:1125279-1125323 7 rl FBtr0329920|FBtr0345337 1120749|1125087 1125927|1125927 TGTGATG 7mer-m1 dme-miR-11-3p 2R + 1125279 1125322 3'utr rl FlyBase G9578.1 AAGATAGGAACTTAAACTATGTGTGATGTTCGTAAAATGCAAAA 9 1125298 0.90930168 4 9 78 1 1.146128036 0.357142857 0.444444444 0.642857143 9 0 0 14 2R:1125279-1125322 7 10.5 993 FBgn0003256 2023.603333 112.5466667 172.76 0.005188764 0.093294633 0.060777958 2 2 2 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2R 1125714 1125719 + 2R_1125714_1125719_+ 0.935227313 0.83315569 0.884191501 0.072175521 rl FBtr0329920|FBtr0345337 1120749|1125087 1125927|1125927 2R + 1125689 1125743 3'utr rl FlyBase G12504.1 ATATCATAATTTAATGTGATTTATCAAGACTAGCAGGGTAAACCTTCCTTGGATG 19 1125709 0.754922276 7 17 146 0.9 1.255272505 0.4 0.052631579 0.1 19 2 0 18 2R:1125689-1125743 6 rl FBtr0329920|FBtr0345337 1120749|1125087 1125927|1125927 AAGACT 6mer3-8 dme-miR-14-3p 2R + 1125696 1125751 3'utr rl FlyBase G9579.1 AATTTAATGTGATTTATCAAGACTAGCAGGGTAAACCTTCCTTGGATGTTTAAGTG 8 1125737 0.765795464 5 7 56 0.933333333 1.146128036 0.4 0.5 0.733333333 8 1 0 14 2R:1125696-1125751 6 7.5 994 FBgn0003256 2023.603333 112.5466667 172.76 0.00370626 0.066639024 0.043412827 5 -23 -9 0.1 dme-miR-33-5p 8mer-A1 CAATGCAA 2R 11280594 11280601 - 2R_11280594_11280601_- 0.627964678 0.60168003 0.614822354 0.01858609 CG9062 FBtr0088181|FBtr0332422 11280482|11280482 11281265|11281106 2R - 11280579 11280650 3'utr CG9062 FlyBase G21953.1 ACATAGAACATACATAGGTATAAGAAATCTGTTAAATATACAGAAAAATCAATGCAATGGTAGTAGCCCAAC 60 11280602 0.944405863 4 58 255 0.985507246 1.832508913 0.057971014 0.133333333 0.246376812 60 1 0 68 2R:11280579-11280650 8 CG9062 FBtr0088181|FBtr0332422 11280482|11280482 11281265|11281106 CAATGCAA 8mer-A1 dme-miR-33-5p 2R - 11280552 11280626 3'utr CG9062 FlyBase G16646.1 AAATCTGTTAAATATACAGAAAAATCAATGCAATGGTAGTAGCCCAACTTGTAAAGAGCTCTATGCAAGCCAATT 50 11280602 0.945504715 6 48 201 0.95890411 1.84509804 0.054794521 0.32 0.534246575 50 3 0 70 2R:11280552-11280626 8 52 995 FBgn0033607 376.12 15.09333333 23.24 0.138253749 3.445229682 2.237521515 1 1 1 0.1 dme-miR-252-5p 6mer3-8 GTACTT 2R 11280832 11280837 - 2R_11280832_11280837_- 1 1 1 0 CG9062 FBtr0088181|FBtr0332422 11280482|11280482 11281265|11281106 2R - 11280690 11280854 3'utr CG9062 FlyBase G21954.1 TCGTTAGGAATAAATATGTACTTCAGATTCAGACTTATAACAATTAGGCTTGCGACACACGTAGATAAGCATTGCAAAGGAGTAACTGCAGACATACCATTAAATCGTATTTGCATCTGAAGCAACTAGACCTAGAGTATTGCGCATATATGTATGTATGTAATA 26 11280838 0.976936123 13 24 165 0.96875 1.190331698 0.1875 0.153846154 0.3125 26 0 1 31 2R:11280690-11280854 6 CG9062 FBtr0088181|FBtr0332422 11280482|11280482 11281265|11281106 GTACTT 6mer3-8 dme-miR-252-5p 2R - 11280798 11280873 3'utr CG9062 FlyBase G16647.1 ACTTTTGTTTGTTCACTTCTCGTTAGGAATAAATATGTACTTCAGATTCAGACTTATAACAATTAGGCTTGCGACA 12 11280827 0.799257652 8 11 92 0.941176471 0.903089987 0.058823529 0.333333333 0.529411765 12 0 1 16 2R:11280798-11280873 6 8.5 996 FBgn0033607 376.12 15.09333333 23.24 0.02259917 0.563162544 0.365748709 1 -10 -4.5 0.1 dme-bantam-3p 7mer-m8 TGATCTC 2R 11281089 11281095 - 2R_11281089_11281095_- 0.661571334 0.661614464 0.661592899 3.05E-05 CG9062 FBtr0088181|FBtr0332422 11280482|11280482 11281265|11281106 2R - 11281034 11281118 stop_codon CG9062 FlyBase G21955.1 CGCAAGTATTGAACGCTGGCAAGTGATCTCCCGCCTAACCGAAGCAGTACCGATGCATTATTGAATGAGAACGAGATTGAGCAGA 71 11281095 0.852989109 7 68 310 0.963414634 1.420505837 0.109756098 0.154929577 0.268292683 71 1 2 79 2R:11281034-11281118 7 CG9062 FBtr0088181|FBtr0332422 11280482|11280482 11281265|11281106 TGATCTC 7mer-m8 dme-bantam-3p 2R - 11281030 11281111 stop_codon CG9062 FlyBase G16648.1 ATTGAACGCTGGCAAGTGATCTCCCGCCTAACCGAAGCAGTACCGATGCATTATTGAATGAGAACGAGATTGAGCAGATCGA 27 11281095 0.793797336 7 27 107 1 1.602059991 0.125 0.407407407 0.6 27 0 0 40 2R:11281030-11281111 7 38.5 997 FBgn0033607 376.12 15.09333333 23.24 0.102360949 2.550795053 1.656626506 0 0 0 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 11285664 11285669 - 2R_11285664_11285669_- 0.999621335 0.99960843 0.999614883 9.12E-06 Fbl6 FBtr0088179|FBtr0088180|FBtr0088178 11285146|11285146|11285146 11285963|11285963|11285963 2R - 11285532 11285762 3'utr Fbl6 FlyBase G21963.2 AGGCCCTAGAGCGTAACTACTGTACTAGCATAGTATTCTCTGCACAGCGGCAGCAGCGAGTTCCTCCCTTTTCTGGAGGTGCCCGCATTAGATGCTGTGCGAATAAGCAACCTTTTGTAAATGCAATATGTATTCATAACTAAGTTGATTCGAATTTTTTGCAGCGCGAAAATCATTTCCTTTTGAAGACAACCGTTGCAACGATTTTCAATGATTTTTTTTAGTATATAT 505 11285670 0.948965696 30 500 3238 0.989726027 2.761927838 0.023972603 0.138613861 0.255136986 505 6 0 578 2R:11285532-11285762 6 Fbl6 FBtr0088179|FBtr0088180|FBtr0088178 11285146|11285146|11285146 11285963|11285963|11285963 GCTGTG 6mer2-7 dme-miR-1008-3p 2R - 11285632 11285803 3'utr Fbl6 FlyBase G16655.1 TGCAATCGCTTGCATCTTCCAATAATGCTTATTTTGTTTATAGGCCCTAGAGCGTAACTACTGTACTAGCATAGTATTCTCTGCACAGCGGCAGCAGCGAGTTCCTCCCTTTTCTGGAGGTGCCCGCATTAGATGCTGTGCGAATAAGCAACCTTTTGTAAATGCAATATGT 309 11285670 0.923095296 15 300 1997 0.979123173 2.194051588 0.022964509 0.414239482 0.622129436 309 8 2 469 2R:11285632-11285803 6 320.5 998 FBgn0033609 266.6666667 9.223333333 14.21 1.201875 34.74882544 22.55453906 1 1 1 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2R 11309690 11309696 + 2R_11309690_11309696_+ 0.650600135 0.545568662 0.598084399 0.074268415 CG7745 FBtr0088119 11309524 11309829 2R + 11309671 11309717 3'utr CG7745 FlyBase G14891.1 CGAACACTTTTCAAATGTGCTAGTCAAGACCAGCAATTGGGATTCCA 18 11309687 0.971601645 3 18 108 1 1.322219295 0.238095238 0.166666667 0.285714286 18 0 0 21 2R:11309671-11309717 7 CG7745 FBtr0088119 11309524 11309829 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R + 11309644 11309704 3'utr CG7745 FlyBase G11325.1 AGTCATTTGCAAAGCTCTACGTTCTACCGAACACTTTTCAAATGTGCTAGTCAAGACCAGC 10 11309687 0.9763679 4 10 66 1 1.146128036 0.214285714 0.3 0.5 10 0 0 14 2R:11309644-11309704 7 13.5 999 FBgn0033616 171.0033333 10.95666667 16.76333333 0.07894583 1.232126559 0.805329091 3 3 3 0.1 dme-miR-252-5p 7mer-m8 GTACTTA 2R 11579041 11579047 - 2R_11579041_11579047_- 0.588299864 0.588299883 0.588299874 0 tou FBtr0333070|FBtr0113066|FBtr0088091|FBtr0333071 11577483|11578878|11578878|11578878 11579826|11579826|11579826|11579826 2R - 11578989 11579093 3'utr tou FlyBase G22043.1 TTTTAAGCACCAACGAAGCGCTCATTTAAGTTTTAAAGTGTATTTTGTACTTATAGCAACTCCGAAATCTGTATTTAAACGTATTATAACAAGTGCTAACAGTTG 46 11579048 0.98838123 10 42 389 0.918032787 1.447158031 0.131147541 0.260869565 0.442622951 46 4 1 56 2R:11578989-11579093 7 tou FBtr0333071|FBtr0113066|FBtr0088091|FBtr0333070 11578878|11578878|11578878|11577483 11579826|11579826|11579826|11579826 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 11578901 11579281 3'utr tou FlyBase G16721.1 AAGAAGCCATCTACAGTAGACGCCCGGACTGGATGAACGCTGACAAATGACAAATGAACACGTACAAAAACTGTCTACCAATTTCCGATCCGATCGATCGATCCATCGTTTGAACAGTATTTTGTGCACAAAGCCGCGTCGCTTTATTTTCTACACTTACAATTCGAACCCTAATTTTAACAACTATTTTTTAAGCACCAACGAAGCGCTCATTTAAGTTTTAAAGTGTATTTTGTACTTATAGCAACTCCGAAATCTGTATTTAAACGTATTATAACAAGTGCTAACAGTTGCCCAGGCAAAAATGCGAACAATTATACTCAAAAAGGCGGTGCGAGGAGGACTTGTAAATGTAAATGAAAGCAAATTAAAATTAAATGT 124 11579048 0.977775772 39 120 793 0.971590909 2.23299611 0.181818182 0.298387097 0.505681818 124 5 0 171 2R:11578901-11579281 7 24 1000 FBgn0033636 2664.063333 30.46 46.92333333 0.009008795 0.787918582 0.511472615 1 1 1 0.1 dme-miR-304-5p 7mer-A1 GAGATTA 2R 11579612 11579618 - 2R_11579612_11579618_- 0.822288353 0.753548469 0.787918411 0.048606449 tou FBtr0088094|FBtr0333070|FBtr0113066|FBtr0088091|FBtr0333071 11579515|11577483|11578878|11578878|11578878 11579826|11579826|11579826|11579826|11579826 2R - 11579533 11579655 5'utr tou FlyBase G22046.1 ACAACAGCATTAACTGAAGCAGCACAATTTTGGTCAAGAGATTAGTTTAGATTAAGCAGAGATTGTACATAAATGGGAGGAATGAGGAGAGGGTCGAGAAGCACAGCATACACATTAATATAT 52 11579627 0.810040972 16 47 333 0.90625 1.462397998 0.21875 0.173076923 0.328125 52 5 1 58 2R:11579533-11579655 7 tou FBtr0333071|FBtr0113066|FBtr0088091|FBtr0088094|FBtr0333070 11578878|11578878|11578878|11579515|11577483 11579826|11579826|11579826|11579826|11579826 GAGATTA 7mer-A1 dme-miR-304-5p 2R - 11579553 11579680 5'utr tou FlyBase G16724.1 GGATGAGGAGGCAGCCGTGGAGACGACAACAGCATTAACTGAAGCAGCACAATTTTGGTCAAGAGATTAGTTTAGATTAAGCAGAGATTGTACATAAATGGGAGGAATGAGGAGAGGGTCGAGAAGCA 35 11579627 0.967596227 11 33 175 0.962962963 1.414973348 0.148148148 0.4 0.611111111 35 1 1 52 2R:11579553-11579680 7 22.5 1001 FBgn0033636 2664.063333 30.46 46.92333333 0.008445745 0.73867367 0.479505576 9 9 9 0.1 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 2R 11619646 11619652 - 2R_11619646_11619652_- 0.822756885 0.822883912 0.822820398 8.98E-05 CG9005 FBtr0300945 11619477 11620844 2R - 11619612 11619665 3'utr CG9005 FlyBase G22107.1 ATTTTCCAATTGATACCTGACTATAACTATTGTATAACAACGTACTACACAGCT 12 11619656 0.989233326 7 10 97 0.857142857 1.079181246 0.071428571 0.166666667 0.285714286 12 2 0 12 2R:11619612-11619665 7 CG9005 FBtr0300945 11619477 11620844 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2R - 11619614 11619665 3'utr CG9005 FlyBase G16756.1 ATTTTCCAATTGATACCTGACTATAACTATTGTATAACAACGTACTACACAG 7 11619655 0.99192614 5 5 46 0.714285714 0.698970004 0.142857143 0 0 7 2 0 5 2R:11619614-11619665 7 7.5 1002 FBgn0033638 313.34 6.546666667 10.11333333 0.023935661 1.145621181 0.741595254 4 3 3.5 0.1 dme-miR-190-5p 6mer2-7 CATATC 2R 11620076 11620081 - 2R_11620076_11620081_- 0.839597228 0.933577134 0.886587181 0.066453825 CG9005 FBtr0306029|FBtr0300945 11619848|11619477 11620844|11620844 2R - 11619985 11620117 3'utr CG9005 FlyBase G22109.1 GGGAATAGAATCGATCGATCAGTTGGTGTGCGCGCTCATATCGATCGTTGTTGTTAGTGTGTAGTGTGTTTTAACCACAGAAATTTAAGAATACCATCGATTTCGTTGAGTGCAAGTTTGAAATGAATTAACC 35 11620092 0.986690016 17 34 295 0.974358974 1.579783597 0.358974359 0.114285714 0.205128205 35 1 0 38 2R:11619985-11620117 6 CG9005 FBtr0300945|FBtr0306029 11619477|11619848 11620844|11620844 CATATC 6mer2-7 dme-miR-190-5p 2R - 11620036 11620107 3'utr CG9005 FlyBase G16758.1 TCGATCGATCAGTTGGTGTGCGCGCTCATATCGATCGTTGTTGTTAGTGTGTAGTGTGTTTTAACCACAGAA 22 11620091 0.985496953 6 21 179 0.888888889 1.505149978 0.416666667 0.318181818 0.583333333 22 4 0 32 2R:11620036-11620107 6 19 1003 FBgn0033638 313.34 6.546666667 10.11333333 0.060637008 2.902240326 1.878707976 11 10 10.5 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 2R 11642877 11642883 - 2R_11642877_11642883_- 0.521223841 0.521223851 0.521223846 7.07E-08 CG9003 FBtr0330632|FBtr0330634|FBtr0113069|FBtr0113068|FBtr0330633|FBtr0088088|FBtr0113067 11642266|11641475|11642266|11642266|11642266|11642266|11641475 11643134|11643188|11643188|11643188|11643134|11643188|11643188 2R - 11642747 11642910 3'utr CG9003 FlyBase G22136.1 AAAAACTCGCAGAAACCAGCATCAAATTGTGATTATTTTATTTACTATGCTACGTTATCTAGACCCTCACTTGTGTAAACTGTATTAGCGCCCACACTCTGTTTGTTATTAACTGCAGCCCGATGAATTGCTAGCTTATATAGATCTGTATATATACATATATG 302 11642884 0.862518302 25 293 2501 0.962962963 1.812913357 0.054320988 0.268211921 0.454320988 302 10 5 390 2R:11642747-11642910 7 CG9003 FBtr0088088|FBtr0113067|FBtr0113068|FBtr0330633|FBtr0113069|FBtr0330632|FBtr0330634 11642266|11641475|11642266|11642266|11642266|11642266|11641475 11643188|11643188|11643188|11643134|11643188|11643134|11643188 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 11642864 11642911 3'utr CG9003 FlyBase G16782.1 CAAAAACTCGCAGAAACCAGCATCAAATTGTGATTATTTTATTTACTA 173 11642884 0.987401994 10 162 1437 0.9437751 1.525969822 0.048192771 0.312138728 0.522088353 173 8 6 235 2R:11642864-11642911 7 220 1004 FBgn0033639 532.1833333 18.93 29.13 0.413391375 11.6217644 7.552351528 1 1 1 0.1 dme-bantam-3p 6mer3-8 TGATCT 2R 11643071 11643076 - 2R_11643071_11643076_- 0.891955212 0.564730049 0.72834263 0.231383158 CG9003 FBtr0330632|FBtr0330634|FBtr0113069|FBtr0113068|FBtr0330633|FBtr0088088|FBtr0113067 11642266|11641475|11642266|11642266|11642266|11642266|11641475 11643134|11643188|11643188|11643188|11643134|11643188|11643188 2R - 11643008 11643112 3'utr CG9003 FlyBase G22137.1 TGTTCGCCATGGTGTTCAGCCTGACCCTCGTCTCGATGATCTGCATGTACTTGCTGGGCCTGCTCGACGCGGCGATGACCACATGGCCACCAGATTCAAATTAAG 23 11643076 0.977523132 9 23 148 1 1.447158031 0.107142857 0.173913043 0.321428571 23 0 0 28 2R:11643008-11643112 6 CG9003 FBtr0088088|FBtr0113067|FBtr0113068|FBtr0330633|FBtr0113069|FBtr0330632|FBtr0330634 11642266|11641475|11642266|11642266|11642266|11642266|11641475 11643188|11643188|11643188|11643134|11643188|11643134|11643188 TGATCT 6mer3-8 dme-bantam-3p 2R - 11643048 11643111 3'utr CG9003 FlyBase G16783.1 GTTCGCCATGGTGTTCAGCCTGACCCTCGTCTCGATGATCTGCATGTACTTGCTGGGCCTGCTC 9 11643076 0.978087945 5 9 63 1 1.176091259 0.2 0.444444444 0.666666667 9 0 0 15 2R:11643048-11643111 6 7.5 1005 FBgn0033639 532.1833333 18.93 29.13 0.014092888 0.396196513 0.257466529 0 0 0 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 2R 11688610 11688616 - 2R_11688610_11688616_- 0.782187852 0.782910538 0.782549195 0.000510955 wal FBtr0088083 11688567 11689078 2R - 11688604 11688636 3'utr wal FlyBase G22155.1 TGTGAAAATGTGAAAACTGTGTACAAAAAAAGA 7 11688619 0.877184095 5 7 27 1 1 0.7 0.285714286 0.5 7 0 0 10 2R:11688604-11688636 7 wal FBtr0088083 11688567 11689078 GTACAAA 7mer-A1 dme-miR-305-5p 2R - 11688591 11688638 3'utr wal FlyBase G16798.1 AGTGTGAAAATGTGAAAACTGTGTACAAAAAAAGATTATAGATCAAAT 8 11688619 0.912093297 3 8 31 1 1.079181246 0.583333333 0.375 0.583333333 8 0 0 12 2R:11688591-11688638 7 6.5 1006 FBgn0010516 627.3333333 62.66 95.9 0.010361318 0.10373444 0.067778936 3 3 3 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 11689014 11689021 - 2R_11689014_11689021_- 0.625362577 0.625363126 0.625362851 3.54E-07 wal FBtr0088083 11688567 11689078 2R - 11688990 11689087 stop_codon wal FlyBase G22158.1 AAGTTGTAAGGCGAGATTGTCACTTGCTGTAGTATAAAGATTGTGTACCGATGAATTGATAACTGTTGCATTTATTTGAATTTTGACATAAGTCCGTG 349 11689022 0.989842041 22 338 3491 0.966292135 1.934498451 0.359550562 0.212034384 0.382022472 349 11 4 430 2R:11688990-11689087 8 wal FBtr0088083|FBtr0088082 11688567|11688934 11689078|11689078 TGCATTTA 8mer-A1 dme-miR-277-3p 2R - 11688971 11689087 stop_codon wal FlyBase G16801.1 AAGTTGTAAGGCGAGATTGTCACTTGCTGTAGTATAAAGATTGTGTACCGATGAATTGATAACTGTTGCATTTATTTGAATTTTGACATAAGTCCGTGGAAGATTTTCCCTTAAATT 254 11689022 0.991362397 22 243 2604 0.960106383 1.858537198 0.29787234 0.374015748 0.57712766 254 11 4 361 2R:11688971-11689087 8 275 1007 FBgn0010516 627.3333333 62.66 95.9 0.438363443 4.388764762 2.867570386 1 1 1 0.1 dme-miR-980-3p 7mer-A1 GCAGCTA 2R 11826991 11826997 + 2R_11826991_11826997_+ 0.791370403 0.764458946 0.777914674 0.019029304 CG13192 FBtr0088031 11826796 11827097 2R + 11826972 11827037 3'utr CG13192 FlyBase G14964.1 AATTAAAGGGCTTGGCAATGCAGCTATTTGTTACTTAGATGAACTTTGACCACCCTTGAAAAAGAA 32 11826990 0.835183514 10 28 216 0.888888889 1.204119983 0.25 0.09375 0.194444444 32 3 1 32 2R:11826972-11827037 7 CG13192 FBtr0088031 11826796 11827097 GCAGCTA 7mer-A1 dme-miR-980-3p 2R + 11826976 11827029 3'utr CG13192 FlyBase G11369.1 AAAGGGCTTGGCAATGCAGCTATTTGTTACTTAGATGAACTTTGACCACCCTTG 16 11826990 0.835828957 7 15 104 0.884615385 0.759667845 0.461538462 0.5 0.692307692 16 0 3 23 2R:11826976-11827029 7 18 1008 FBgn0033653 156.6666667 14.10333333 21.37666667 0.114893617 1.27629402 0.842039607 1 1 1 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 11901057 11901064 + 2R_11901057_11901064_+ 0.500119386 0.500119915 0.50011965 3.54E-07 Zip48C FBtr0088038 11900986 11901394 2R + 11901028 11901122 3'utr Zip48C FlyBase G15003.1 AATCTAGTGCTAAACTCAAAGATTCCACTGTACTTAACGCAAAACTCTGCTGTCTTGTAAATAGAAGCATGCTGTGTACAAATCTCAGAACCAGC 26 11901056 0.975057564 6 22 139 0.848484848 0.84509804 0.03030303 0.230769231 0.393939394 26 2 3 28 2R:11901028-11901122 8 Zip48C FBtr0088038 11900986 11901394 GTACTTAA 8mer-A1 dme-miR-252-5p 2R + 11901031 11901083 3'utr Zip48C FlyBase G11397.1 CTAGTGCTAAACTCAAAGATTCCACTGTACTTAACGCAAAACTCTGCTGTCTT 22 11901056 0.929426898 2 22 135 1 1.477121255 0.033333333 0.272727273 0.466666667 22 0 0 30 2R:11901031-11901083 8 21 1009 FBgn0033665 71.33333333 4.603333333 6.97 0.294392523 4.561911658 3.012912482 1 1 1 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 2R 11901300 11901305 + 2R_11901300_11901305_+ 0.99999833 0.999999251 0.99999879 7.07E-07 Zip48C FBtr0088038 11900986 11901394 2R + 11901287 11901322 3'utr Zip48C FlyBase G15004.1 TAAACAAACGTGCATGTGAATTAGGTTTTAAGTTGT 28 11901307 0.800114717 4 26 232 0.942857143 1.51851394 0.314285714 0.214285714 0.371428571 28 2 0 33 2R:11901287-11901322 6 Zip48C FBtr0088038 11900986 11901394 ATGTGA 6mer3-8 dme-miR-1003-3p 2R + 11901284 11901321 3'utr Zip48C FlyBase G11399.1 TTGTAAACAAACGTGCATGTGAATTAGGTTTTAAGTTG 8 11901307 0.9728619 4 8 58 1 1.176091259 0.133333333 0.625 0.8 8 0 0 15 2R:11901284-11901321 6 17.5 1010 FBgn0033665 71.33333333 4.603333333 6.97 0.245327103 3.801593049 2.510760402 -7 -7 -7 0.1 dme-miR-1008-3p 7mer-m8 AGCTGTG 2R 11977117 11977123 + 2R_11977117_11977123_+ 0.668175227 0.668661593 0.66841841 0.000343937 ADD1 FBtr0088042 11977075 11977721 2R + 11977056 11977167 stop_codon ADD1 FlyBase G15023.1 ACGGCTGAGATTGTTGGCTAGTTTATGGTGATCATTTGAGGTCCCGCCGAAGAAGATTGGTAGCTGTGGCCCTCAAAACGTGCCATTTAGTATTTGTACTAGAATTTAAAAC 94 11977113 0.950595072 15 91 539 0.963636364 2.025305865 0.109090909 0.138297872 0.263636364 94 4 0 106 2R:11977056-11977167 7 ADD1 FBtr0088042 11977075 11977721 AGCTGTG 7mer-m8 dme-miR-1008-3p 2R + 11977032 11977167 stop_codon ADD1 FlyBase G11413.1 GACTCTGCGCCAGACGAGTTCGCCACGGCTGAGATTGTTGGCTAGTTTATGGTGATCATTTGAGGTCCCGCCGAAGAAGATTGGTAGCTGTGGCCCTCAAAACGTGCCATTTAGTATTTGTACTAGAATTTAAAAC 83 11977113 0.970090565 14 82 464 0.98245614 2.049218023 0.052631579 0.289156627 0.48245614 83 2 0 112 2R:11977032-11977167 7 72.5 1011 FBgn0026573 1224.666667 33.41666667 51.42333333 0.059199782 2.16957606 1.40986582 4 4 4 0.1 dme-bantam-3p 6mer3-8 TGATCT 2R 11977211 11977216 + 2R_11977211_11977216_+ 0.999708105 0.999997513 0.999852809 0.000204637 ADD1 FBtr0088042 11977075 11977721 2R + 11977191 11977234 3'utr ADD1 FlyBase G15024.1 AACATTTTATGTAAATACTTTGATCTGTTTATAGTTTAAACAAT 15 11977210 0.641064807 7 13 167 0.9375 1.176091259 0.0625 0.066666667 0.125 15 1 0 15 2R:11977191-11977234 6 ADD1 FBtr0088042 11977075 11977721 TGATCT 6mer3-8 dme-bantam-3p 2R + 11977199 11977234 3'utr ADD1 FlyBase G11414.1 ATGTAAATACTTTGATCTGTTTATAGTTTAAACAAT 17 11977210 0.712294705 6 16 184 0.931034483 1.431363764 0 0.529411765 0.724137931 17 2 0 27 2R:11977199-11977234 6 15 1012 FBgn0026573 1224.666667 33.41666667 51.42333333 0.012248231 0.448877805 0.291696376 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 11977302 11977307 + 2R_11977302_11977307_+ 0.999999959 0.999999969 0.999999964 0 ADD1 FBtr0088042|FBtr0088042|FBtr0088042 11977075|11977075|11977075 11977721|11977721|11977721 2R + 11977265 11977324 3'utr ADD1 FlyBase G15025.1 GACATTAACACCATTATATTAACTGAATCGCGTATTCCTGTGAATATAAGTCGGGCACGT 28 11977299 0.983292618 9 27 202 0.941176471 1.505149978 0.088235294 0.178571429 0.323529412 28 2 0 32 2R:11977265-11977324 6 ADD1 FBtr0088042|FBtr0088042|FBtr0088042 11977075|11977075|11977075 11977721|11977721|11977721 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 11977284 11977323 3'utr ADD1 FlyBase G11415.1 TAACTGAATCGCGTATTCCTGTGAATATAAGTCGGGCACG 25 11977299 0.699335887 7 23 184 0.95 1.579783597 0.2 0.48 0.675 25 2 0 38 2R:11977284-11977323 6 26 1013 FBgn0026573 1224.666667 33.41666667 51.42333333 0.021230267 0.778054863 0.505607053 3 3 3 0.1 dme-miR-8-3p 6mer2-7 AGTATT 2R 11980847 11980852 - 2R_11980847_11980852_- 0.997262312 0.888983099 0.943122706 0.076564957 CG33145 FBtr0088048|FBtr0088047 11980575|11980575 11981259|11981729 2R - 11980810 11980864 3'utr CG33145 FlyBase G22245.1 AATAGAAGAGAAAGTATTTATTTTTGGACATGACTCGCCACATATATGTATCCTT 6 11980846 0.978703848 4 5 37 1 0.77815125 0 0 0 6 0 0 6 2R:11980810-11980864 6 CG33145 FBtr0088047|FBtr0088048 11980575|11980575 11981729|11981259 AGTATT 6mer2-7 dme-miR-8-3p 2R - 11980821 11980867 3'utr CG33145 FlyBase G16862.1 TATAATAGAAGAGAAAGTATTTATTTTTGGACATGACTCGCCACATA 6 11980841 0.972395318 4 6 38 1 1.079181246 0.25 0.5 0.75 6 0 0 12 2R:11980821-11980867 6 3.5 1014 FBgn0053145 299.43 15.87666667 24.38666667 0.011688876 0.220449297 0.14352105 -6 -11 -8.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2R 11991313 11991320 + 2R_11991313_11991320_+ 0.63113665 0.63113665 0.63113665 0 CG8298 FBtr0306003 11991281 11992350 2R + 11991105 11991372 stop_codon CG8298 FlyBase G15033.1 GAAATGCCTGCACTGGAACAACTACGAGACGTACGAGGCTGATATTGAGCTGTTTGCTCAGCGAGAACTTGATCCCAATTTACCTGTAAGGCGTTCCGTACCGGGCAGTATATTCCTGACCACTTCTTTTGCGATGATTATCCTGGCTAACTACTTAAAGTCCAATCCCCTGAAATAGTGGCTGATGTAGGGAAGAACGGCTGCTCTATCTAGTCAACCAAACACGTTCAAATGTGTGCATTAAAATTTATTGTTTAGTTTAGCATAT 178 11991312 0.976302187 34 169 1094 0.941176471 1.806179974 0.132352941 0.106741573 0.220588235 178 10 2 192 2R:11991105-11991372 8 CG8298 FBtr0306003 11991281 11992350 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R + 11991126 11991364 stop_codon CG8298 FlyBase G11420.1 CTACGAGACGTACGAGGCTGATATTGAGCTGTTTGCTCAGCGAGAACTTGATCCCAATTTACCTGTAAGGCGTTCCGTACCGGGCAGTATATTCCTGACCACTTCTTTTGCGATGATTATCCTGGCTAACTACTTAAAGTCCAATCCCCTGAAATAGTGGCTGATGTAGGGAAGAACGGCTGCTCTATCTAGTCAACCAAACACGTTCAAATGTGTGCATTAAAATTTATTGTTTAGTT 126 11991312 0.750569599 34 117 779 0.948598131 2.006466042 0.130841121 0.436507937 0.668224299 126 10 1 203 2R:11991126-11991364 8 48 1015 FBgn0033673 177.0033333 9.53 14.54 0.271181334 5.036726128 3.301237964 1 1 1 0.1 dme-miR-999-3p 6mer3-8 AGTTAA 2R 12033485 12033490 + 2R_12033485_12033490_+ 0.745126791 0.926618066 0.835872429 0.128333729 pds5 FBtr0087974|FBtr0306062 12032980|12032980 12033725|12033725 2R + 12033454 12033503 3'utr pds5 FlyBase G15067.1 AAGTAATTAAAATTAACTTTTCTATGATCGCAGTTAATTTTTAGTTAATG 81 12033478 0.828528072 5 78 941 0.976744186 1.924279286 0.011627907 0.061728395 0.11627907 81 2 0 84 2R:12033454-12033503 6 pds5 FBtr0087974|FBtr0306062 12032980|12032980 12033725|12033725 AGTTAA 6mer3-8 dme-miR-999-3p 2R + 12033455 12033507 3'utr pds5 FlyBase G11442.1 AGTAATTAAAATTAACTTTTCTATGATCGCAGTTAATTTTTAGTTAATGTAAC 51 12033478 0.814268939 6 50 574 0.985915493 1.84509804 0.042253521 0.333333333 0.521126761 51 1 0 70 2R:12033455-12033507 6 65 1016 FBgn0260012 1188.333333 30.65333333 47.06 0.054698457 2.120487168 1.38121547 7 7 7 0.1 dme-miR-14-3p 7mer-A1 AGACTGA 2R 12049766 12049772 + 2R_12049766_12049772_+ 0.823349315 0.823349359 0.823349337 7.07E-08 Drep-1 FBtr0330629|FBtr0087978 12049191|12049164 12050172|12050172 2R + 12049691 12049788 3'utr Drep-1 FlyBase G15086.1 GTAGAGTGGAAACGCACATCAAATATTGTTTTTAGACCAATGCCATTGTGAATGTCATTCGTTAAAGGCCAATTGAGACTGACTGAATTTATGTGTAA 137 12049764 0.942985892 7 134 550 0.965517241 2.225309282 0.373563218 0.233576642 0.396551724 137 6 0 168 2R:12049691-12049788 7 Drep-1 FBtr0330629|FBtr0087978 12049191|12049164 12050172|12050172 AGACTGA 7mer-A1 dme-miR-14-3p 2R + 12049743 12049790 3'utr Drep-1 FlyBase G11459.1 TGTCATTCGTTAAAGGCCAATTGAGACTGACTGAATTTATGTGTAATA 98 12049764 0.754699072 4 96 372 0.962264151 1.582631439 0.352201258 0.428571429 0.647798742 98 3 3 153 2R:12049743-12049790 7 116 1017 FBgn0024732 75.66666667 4.37 6.78 1.533039648 26.54462243 17.10914454 2 2 2 0.1 dme-miR-12-5p 6mer2-7 ATACTC 2R 12146152 12146157 - 2R_12146152_12146157_- 0.99998483 0.993747538 0.996866184 0.004410437 CG8878 FBtr0088018|FBtr0088017 12146022|12146022 12146701|12146701 2R - 12146123 12146237 3'utr CG8878 FlyBase G22272.1 TAGTTTCGTTAGGCTATCAACAACCATATTATAGACCACATGTACGACTCGTTTCACCCACATTTCATGCAGCCAGGTACATACTCTCCTCAAAAAGTATTTAATATAACTAGAT 24 12146156 0.792361975 10 23 145 1 1.447158031 0.142857143 0.166666667 0.285714286 24 0 0 28 2R:12146123-12146237 6 CG8878 FBtr0088018|FBtr0088017 12146022|12146022 12146701|12146701 ATACTC 6mer2-7 dme-miR-12-5p 2R - 12146112 12146207 3'utr CG8878 FlyBase G16887.1 ATAGACCACATGTACGACTCGTTTCACCCACATTTCATGCAGCCAGGTACATACTCTCCTCAAAAAGTATTTAATATAACTAGATAATGGTTATTT 16 12146156 0.978456746 7 14 89 0.916666667 1.041392685 0.083333333 0.375 0.583333333 16 1 1 22 2R:12146112-12146207 6 9 1018 FBgn0027504 1146.95 34.64 53.11333333 0.007846898 0.259815242 0.169448977 -1 -1 -1 0.1 dme-miR-8-3p 6mer2-7 AGTATT 2R 12166876 12166881 - 2R_12166876_12166881_- 1 0.999160521 0.999580261 0.000593616 Oda FBtr0088015|FBtr0088013 12166293|12166574 12167397|12167397 2R - 12166790 12166906 3'utr Oda FlyBase G22343.1 ATTTTATGTTTAAGCTTATATATGAAGTATTGTAATCCCAATTTGTTCGCACTTAAAAATATTCAATATATTTTTATTCACTTTTTGTACGCCGAAAGCGACGAGAACGGCGAGGTA 13 12166884 0.989741016 8 12 119 0.933333333 1.146128036 0.066666667 0.153846154 0.266666667 13 1 0 14 2R:12166790-12166906 6 Oda FBtr0088015|FBtr0088013 12166293|12166574 12167397|12167397 AGTATT 6mer2-7 dme-miR-8-3p 2R - 12166829 12166894 3'utr Oda FlyBase G16950.1 AGCTTATATATGAAGTATTGTAATCCCAATTTGTTCGCACTTAAAAATATTCAATATATTTTTATT 6 12166876 0.993762778 4 6 62 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2R:12166829-12166894 6 5.5 1019 FBgn0014184 5981.923333 429.3966667 665.3566667 0.000919437 0.01280867 0.008266243 3 -5 -1 0.1 dme-miR-7-5p 6mer3-8 GTCTTC 2R 12167170 12167175 - 2R_12167170_12167175_- 0.999999738 0.999993252 0.999996495 4.53E-06 Oda FBtr0088015|FBtr0088013|FBtr0088014 12166293|12166574|12167027 12167397|12167397|12167397 2R - 12167064 12167225 5'utr Oda FlyBase G22345.1 CTTTTTGAATCTTCGCGTTGTTTATGTAGTCGAAAATCGTTTTGAAAATTGTCTTCGGAGCGGCTTCATTTTTGGTAGACTTTCAATTATGGCCAGCCACGTTAAGAGCCTGATCGCAAATTACTATATTAAACTATATCCAACAACAACAAAAATCGAACG 37 12167176 0.979509746 17 37 271 1 1.643452676 0.045454545 0.189189189 0.318181818 37 0 0 44 2R:12167064-12167225 6 Oda FBtr0088014|FBtr0088015|FBtr0088013 12167027|12166293|12166574 12167397|12167397|12167397 GTCTTC 6mer3-8 dme-miR-7-5p 2R - 12167058 12167186 5'utr Oda FlyBase G16952.1 TTTTGAAAATTGTCTTCGGAGCGGCTTCATTTTTGGTAGACTTTCAATTATGGCCAGCCACGTTAAGAGCCTGATCGCAAATTACTATATTAAACTATATCCAACAACAACAAAAATCGAACGAAAACG 35 12167177 0.985440326 12 27 223 0.87037037 1.194976603 0.074074074 0.382352941 0.611111111 34 5 2 47 2R:12167058-12167186 6 14 1020 FBgn0014184 5981.923333 429.3966667 665.3566667 0.002340384 0.032603886 0.021041346 1 2 1.5 0.1 dme-miR-277-3p 6mer2-7 GCATTT 2R 12169881 12169886 + 2R_12169881_12169886_+ 0.998504048 0.818245642 0.908374845 0.127461937 SmD3 FBtr0087986 12169860 12170003 2R + 12169864 12169937 3'utr SmD3 FlyBase G15105.1 ACTGCCTACTGAACAACGCATTTCTATTCTCTAAGTTGCGGGCATCATATTATTAGCGGGCGGGTCGAACTTCT 13 12169888 0.983637194 8 13 102 1 1.255272505 0.166666667 0.384615385 0.555555556 13 0 0 18 2R:12169864-12169937 6 SmD3 FBtr0087986 12169860 12170003 GCATTT 6mer2-7 dme-miR-277-3p 2R + 12169866 12169910 3'utr SmD3 FlyBase G11472.1 TGCCTACTGAACAACGCATTTCTATTCTCTAAGTTGCGGGCATCA 11 12169888 0.646856793 3 11 87 1 1.146128036 0.071428571 0.272727273 0.428571429 11 0 0 14 2R:12169866-12169910 6 9.5 1021 FBgn0023167 214.3466667 36.93 56.45666667 0.044320727 0.257243434 0.16827065 -7 -7 -7 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2R 12177463 12177469 - 2R_12177463_12177469_- 0.823349491 0.823349562 0.823349527 7.07E-08 EndoG FBtr0088012 12177428 12177540 2R - 12177449 12177483 3'utr EndoG FlyBase G22363.1 AATTTTCTTCTTTTCCAAAGAACTTGTGGATTAAT 6 12177471 0.892011484 2 6 69 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2R:12177449-12177483 7 EndoG FBtr0088012 12177428 12177540 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 12177449 12177482 3'utr EndoG FlyBase G16968.1 ATTTTCTTCTTTTCCAAAGAACTTGTGGATTAAT 5 12177472 0.747228632 2 5 60 1 0.698970004 0 0 0 5 0 0 5 2R:12177449-12177482 7 5.5 1022 FBgn0033690 109.39 12.2 18.82333333 0.050278819 0.450819672 0.292190544 2 3 2.5 0.1 dme-miR-79-3p 8mer-A1 TAGCTTTA 2R 12182209 12182216 + 2R_12182209_12182216_+ 0.625364 0.625364009 0.625364005 0 wash FBtr0339595|FBtr0087989 12182199|12182199 12182373|12182373 2R + 12182165 12182254 stop_codon wash FlyBase G15122.1 GAACACTCCGAGGACGACGAGGATGGGTGGAACTAGTGAATATTTAGCTTTAGTACCGGTTTAAGTGCCTTGGCTGGCTTAAAGCACTAG 24 12182208 0.974772391 7 23 141 1 1.531478917 0.147058824 0.333333333 0.529411765 24 0 0 34 2R:12182165-12182254 8 wash FBtr0339595|FBtr0087989 12182199|12182199 12182373|12182373 TAGCTTTA 8mer-A1 dme-miR-79-3p 2R + 12182164 12182268 stop_codon wash FlyBase G11488.1 CGAACACTCCGAGGACGACGAGGATGGGTGGAACTAGTGAATATTTAGCTTTAGTACCGGTTTAAGTGCCTTGGCTGGCTTAAAGCACTAGCAACCTAGGTTCTC 16 12182208 0.985694226 10 13 114 0.923076923 1.079181246 0.038461538 0.4375 0.653846154 16 1 1 24 2R:12182164-12182268 8 10 1023 FBgn0033692 122.6666667 8.66 13.35666667 0.081521739 1.154734411 0.748689793 1 1 1 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 2R 12192420 12192426 - 2R_12192420_12192426_- 0.521223855 0.521223855 0.521223855 0 CG8858 FBtr0088008 12192372 12192572 2R - 12192373 12192439 3'utr CG8858 FlyBase G22374.1 GATAATTTTCTATTGTGATTCATTGATCCAGGAGTGTAAGGAAACCTTAAATATACTATCATAAATA 14 12192418 0.991198907 6 14 148 1 1.255272505 0.277777778 0.214285714 0.388888889 14 0 0 18 2R:12192373-12192439 7 CG8858 FBtr0088008 12192372 12192572 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 12192412 12192437 3'utr CG8858 FlyBase G16978.1 TAATTTTCTATTGTGATTCATTGATC 7 12192429 0.571277289 4 5 60 0.7 0.84509804 0.1 0.428571429 0.6 7 3 0 7 2R:12192412-12192437 7 9.5 1024 FBgn0033698 597.0133333 12.17333333 18.65666667 0.015912542 0.780394304 0.509201358 -8 3 -2.5 0.1 dme-miR-1008-3p 7mer-m8 AGCTGTG 2R 12273854 12273860 + 2R_12273854_12273860_+ 0.670873144 0.664229941 0.667551543 0.004697452 Cam FBtr0345018|FBtr0304963|FBtr0088001|FBtr0304964 12273793|12273793|12273793|12273793 12274625|12278809|12274625|12276621 2R + 12273819 12273921 3'utr Cam FlyBase G15131.1 CCTTTCTATTTTTTTAAGATGTTGACGAAGACTGTAGCTGTGCGCAATAACATCGCGCCACGCTGTTGCTATGGACCCCAGTAAAAGATCTTAAAAAAAAAAC 93 12273853 0.819222965 13 85 478 0.881889764 2.049218023 0.346456693 0.311827957 0.496062992 93 15 0 112 2R:12273819-12273921 7 Cam FBtr0088001|FBtr0304964|FBtr0345018|FBtr0304963 12273793|12273793|12273793|12273793 12274625|12276621|12274625|12278809 AGCTGTG 7mer-m8 dme-miR-1008-3p 2R + 12273825 12273916 3'utr Cam FlyBase G11494.1 TATTTTTTTAAGATGTTGACGAAGACTGTAGCTGTGCGCAATAACATCGCGCCACGCTGTTGCTATGGACCCCAGTAAAAGATCTTAAAAAA 63 12273853 0.900362024 12 61 328 0.958762887 1.491361694 0.237113402 0.380952381 0.597938144 63 2 2 93 2R:12273825-12273916 7 66 1025 FBgn0000253 25804.84 1958.443333 3036.34 0.00255766 0.033700235 0.021736696 1 1 1 0.1 dme-miR-8-3p 7mer-m8 CAGTATT 2R 12274393 12274399 + 2R_12274393_12274399_+ 0.660628382 0.661615052 0.661121717 0.000697702 Cam FBtr0345018|FBtr0304963|FBtr0088001|FBtr0304964 12273793|12273793|12273793|12273793 12274625|12278809|12274625|12276621 2R + 12274374 12274416 3'utr Cam FlyBase G15135.1 AAGCAGCAGCAGCATCCACCAGTATTGCCGAAAGATGGCGCCC 19 12274399 0.917330081 2 18 63 0.954545455 1.322219295 0.090909091 0.157894737 0.272727273 19 1 0 21 2R:12274374-12274416 7 Cam FBtr0088001|FBtr0304964|FBtr0345018|FBtr0304963 12273793|12273793|12273793|12273793 12274625|12276621|12274625|12278809 CAGTATT 7mer-m8 dme-miR-8-3p 2R + 12274365 12274415 3'utr Cam FlyBase G11495.2 AGAAGCAAGAAGCAGCAGCAGCATCCACCAGTATTGCCGAAAGATGGCGCC 12 12274399 0.872703081 3 10 33 0.80952381 1.230448921 0.095238095 0.666666667 0.80952381 12 4 0 17 2R:12274365-12274415 7 14.5 1026 FBgn0000253 25804.84 1958.443333 3036.34 0.00056191 0.007403839 0.004775486 -6 -6 -6 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 2R 12274548 12274553 + 2R_12274548_12274553_+ 0.950563421 0.98529988 0.96793165 0.024562415 Cam FBtr0345018|FBtr0304963|FBtr0088001|FBtr0304964 12273793|12273793|12273793|12273793 12274625|12278809|12274625|12276621 2R + 12274520 12274595 3'utr Cam FlyBase G15136.1 AAACCCCCCACTCTGTAAGCTAGCAAATTGTGTTTAAAGTATAATGAAAAAATTGTCGATTTCGTTGCGAGAAAGA 31 12274547 0.83175836 6 31 234 1 1.531478917 0.294117647 0.096774194 0.176470588 31 0 0 34 2R:12274520-12274595 6 Cam FBtr0088001|FBtr0304964|FBtr0345018|FBtr0304963 12273793|12273793|12273793|12273793 12274625|12276621|12274625|12278809 TGTGTT 6mer3-8 dme-miR-317-3p 2R + 12274505 12274586 3'utr Cam FlyBase G11497.1 AAAAGAAAATAATGAAAACCCCCCACTCTGTAAGCTAGCAAATTGTGTTTAAAGTATAATGAAAAAATTGTCGATTTCGTTG 21 12274547 0.984556926 4 18 139 0.9 1.130333768 0.3 0.333333333 0.533333333 21 2 1 27 2R:12274505-12274586 6 14 1027 FBgn0000253 25804.84 1958.443333 3036.34 0.000542534 0.007148535 0.004610814 1 1 1 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 12275344 12275351 + 2R_12275344_12275351_+ 0.500090103 0.500106874 0.500098488 1.19E-05 Cam FBtr0304963|FBtr0304964 12273793|12273793 12278809|12276621 2R + 12275325 12275363 3'utr Cam FlyBase G15139.1 ATACATATAAATACCTAATGTACTTAATGCAACAGGAAA 34 12275343 0.741351897 4 34 205 1 1.681241237 0.041666667 0.235294118 0.458333333 34 0 0 48 2R:12275325-12275363 8 Cam FBtr0304964|FBtr0304963 12273793|12273793 12276621|12278809 GTACTTAA 8mer-A1 dme-miR-252-5p 2R + 12275305 12275366 3'utr Cam FlyBase G11498.1 AACTCTATACATATATATATATACATATAAATACCTAATGTACTTAATGCAACAGGAAAACC 23 12275343 0.975109623 2 23 145 1 1.51851394 0.121212121 0.391304348 0.575757576 23 0 0 33 2R:12275305-12275366 8 28 1028 FBgn0000253 25804.84 1958.443333 3036.34 0.001085068 0.014297069 0.009221629 1 1 1 0.1 dme-miR-305-3p 7mer-m1 TGTGCCG 2R 12322937 12322943 - 2R_12322937_12322943_- 0.78801079 0.729188073 0.758599431 0.04159393 CG8841 FBtr0087966|FBtr0087964|FBtr0087965 12322505|12322505|12322505 12323316|12323316|12323316 2R - 12322929 12322974 3'utr CG8841 FlyBase G22409.1 GTTTTTGTAATCTGTGACAGAAAATGTTCCTTGTGCCGTATATTTT 30 12322949 0.727617264 4 30 214 1 1.579783597 0.605263158 0.2 0.368421053 30 0 0 38 2R:12322929-12322974 7 CG8841 FBtr0087965|FBtr0087966|FBtr0087964 12322505|12322505|12322505 12323316|12323316|12323316 TGTGCCG 7mer-m1 dme-miR-305-3p 2R - 12322919 12322963 3'utr CG8841 FlyBase G17000.1 CTGTGACAGAAAATGTTCCTTGTGCCGTATATTTTATTGCATGGT 27 12322950 0.976292033 3 27 185 1 1.602059991 0.65 0.37037037 0.575 27 0 0 40 2R:12322919-12322963 7 27.5 1029 FBgn0033713 204.63 7.073333333 10.83333333 0.134388897 3.887841659 2.538461538 6 7 6.5 0.1 dme-miR-282-5p 6mer2-7 GAGGCT 2R 12323140 12323145 - 2R_12323140_12323145_- 0.999998017 0.999978854 0.999988435 1.35E-05 CG8841 FBtr0087966|FBtr0087964|FBtr0087965 12322505|12322505|12322505 12323316|12323316|12323316 2R - 12323123 12323171 3'utr CG8841 FlyBase G22410.1 TTTTGCTTATTGGCAACAAAAAAAATGAGGCTTATCAGTTACGATGTGG 104 12323146 0.963285008 5 104 426 1 2.075546961 0.201680672 0.125 0.235294118 104 0 0 119 2R:12323123-12323171 6 CG8841 FBtr0087965|FBtr0087966|FBtr0087964 12322505|12322505|12322505 12323316|12323316|12323316 GAGGCT 6mer2-7 dme-miR-282-5p 2R - 12323126 12323168 3'utr CG8841 FlyBase G17001.1 TGCTTATTGGCAACAAAAAAAATGAGGCTTATCAGTTACGATG 69 12323146 0.985004196 3 66 265 1 1.977723605 0.115789474 0.308823529 0.505263158 68 0 0 95 2R:12323126-12323168 6 83.5 1030 FBgn0033713 204.63 7.073333333 10.83333333 0.40805356 11.80490104 7.707692308 1 1 1 0.1 dme-miR-277-3p 7mer-A1 GCATTTA 2R 12323254 12323260 - 2R_12323254_12323260_- 0.823332457 0.823292001 0.823312229 2.86E-05 CG8841 FBtr0087966|FBtr0087964|FBtr0087965 12322505|12322505|12322505 12323316|12323316|12323316 2R - 12323234 12323382 stop_codon CG8841 FlyBase G22411.1 CGCAACGTGGAGCCTGCCATCTGGTACGATACGGAGGTCAAGCTCTTCGAGATTCAGCGCGTCTAGGTCAGTAAGTGGACTCCCAGCTACACCAGCAGCGCAATCGTAGCTTACACGCTTTGGCATTTACTGTAGTTAATTTATTTAGT 43 12323262 0.980589189 10 41 292 0.980392157 1.397940009 0.117647059 0.162790698 0.294117647 43 0 1 50 2R:12323234-12323382 7 CG8841 FBtr0087965|FBtr0087966|FBtr0087964 12322505|12322505|12322505 12323316|12323316|12323316 GCATTTA 7mer-A1 dme-miR-277-3p 2R - 12323240 12323283 3'utr CG8841 FlyBase G17002.1 GCAATCGTAGCTTACACGCTTTGGCATTTACTGTAGTTAATTTA 18 12323262 0.714205808 4 15 135 0.84 0.84509804 0.12 0.277777778 0.48 18 2 2 21 2R:12323240-12323283 7 25 1031 FBgn0033713 204.63 7.073333333 10.83333333 0.122171725 3.534401508 2.307692308 2 2 2 0.1 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 12333706 12333712 + 2R_12333706_12333712_+ 0.823321236 0.82332597 0.823323603 3.39E-06 garz FBtr0087897 12333495 12333860 2R + 12333648 12333746 3'utr garz FlyBase G15178.1 AGCTATCCAGAAAAACAAACCTAAATCACAGATGCGAAGTTCGGCTGAACCCCCTATAAGCTTTAGTAATGCAAATAGTTTAATTAATATTAATTAAAT 287 12333704 0.977839565 10 283 1868 0.984520124 2.201397124 0.018575851 0.111498258 0.210526316 287 4 1 318 2R:12333648-12333746 7 garz FBtr0087897 12333495 12333860 AGCTTTA 7mer-A1 dme-miR-79-3p 2R + 12333681 12333732 3'utr garz FlyBase G11521.1 GCGAAGTTCGGCTGAACCCCCTATAAGCTTTAGTAATGCAAATAGTTTAATT 188 12333704 0.827074714 6 185 1164 0.988679245 2.418301291 0.018867925 0.308510638 0.509433962 188 3 0 262 2R:12333681-12333732 7 226 1032 FBgn0264560 903.09 16.44 25.09666667 0.250251913 13.74695864 9.005179971 2 2 2 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 12339635 12339642 - 2R_12339635_12339642_- 0.625364177 0.625364192 0.625364185 0 CG8839 FBtr0087957|FBtr0087959|FBtr0087958|FBtr0087960 12339608|12339608|12339608|12339608 12339892|12339892|12339892|12339892 2R - 12339620 12339719 3'utr CG8839 FlyBase G22424.1 TCGATGTGGATTTATCTATTTTGTATGTGTTTTTAAATGTAATCTAATCATAGATCCGCGCGGATCCGTTCCCGTTTTGCATTTATAATAAATAATTGCA 26 12339643 0.991061188 8 24 260 0.933333333 1.146128036 0.166666667 0.153846154 0.266666667 26 1 1 28 2R:12339620-12339719 8 CG8839 FBtr0087958|FBtr0087960|FBtr0087957|FBtr0087959 12339608|12339608|12339608|12339608 12339892|12339892|12339892|12339892 TGCATTTA 8mer-A1 dme-miR-277-3p 2R - 12339626 12339704 3'utr CG8839 FlyBase G17018.1 CTATTTTGTATGTGTTTTTAAATGTAATCTAATCATAGATCCGCGCGGATCCGTTCCCGTTTTGCATTTATAATAAATA 20 12339643 0.748667447 7 17 180 0.911764706 1.014240439 0.176470588 0.5 0.705882353 20 1 2 31 2R:12339626-12339704 8 13.5 1033 FBgn0033717 1014.353333 58.28666667 87.84 0.013308972 0.231613863 0.153688525 1 1 1 0.1 dme-miR-980-3p 6mer2-7 GCAGCT 2R 12339863 12339868 - 2R_12339863_12339868_- 0.807325784 0.971103364 0.889214574 0.115808252 CG8839 FBtr0087957|FBtr0087959|FBtr0087958|FBtr0087960 12339608|12339608|12339608|12339608 12339892|12339892|12339892|12339892 2R - 12339725 12339984 stop_codon CG8839 FlyBase G22425.1 CCAACTTCAATCAGGATCGACTTTGTTTGGCCGTTGCCGAGGAATTGGAGCGAGCCTTTGGCGGTTGGGCCAAGCCCGAAGTTCGGCTCTAGGAGCAGTCTCAAACGTGCAAGTATGCAGCTTAGCTAGCTTTTAGATAGTAGTGGTCAGGTTAACGTCCTGGTCTCCCCCCACCCATTACTAACTACCCCTACCCACCCGAGCATTCGCCTGGCGATGAAAGGTATTCCTTGTGTACTCCAGTGCCTCATTGTAATATC 87 12339868 0.978622762 29 83 564 0.962616822 1.53571597 0.261682243 0.16091954 0.317757009 87 2 2 103 2R:12339725-12339984 6 CG8839 FBtr0087958|FBtr0087960|FBtr0087957|FBtr0087959 12339608|12339608|12339608|12339608 12339892|12339892|12339892|12339892 GCAGCT 6mer2-7 dme-miR-980-3p 2R - 12339720 12339900 stop_codon CG8839 FlyBase G17019.1 GGCTCTAGGAGCAGTCTCAAACGTGCAAGTATGCAGCTTAGCTAGCTTTTAGATAGTAGTGGTCAGGTTAACGTCCTGGTCTCCCCCCACCCATTACTAACTACCCCTACCCACCCGAGCATTCGCCTGGCGATGAAAGGTATTCCTTGTGTACTCCAGTGCCTCATTGTAATATCAATTT 50 12339869 0.861418317 23 47 316 0.934210526 1.851258349 0.25 0.44 0.631578947 50 5 0 71 2R:12339720-12339900 6 23 1034 FBgn0033717 1014.353333 58.28666667 87.84 0.022674545 0.394601395 0.261839709 0 1 0.5 0.1 dme-miR-252-5p 7mer-m8 GTACTTA 2R 12425347 12425353 + 2R_12425347_12425353_+ 0.588299516 0.58829953 0.588299523 0 CG8520 FBtr0303222|FBtr0087926 12425250|12425250 12425459|12425459 2R + 12425333 12425376 3'utr CG8520 FlyBase G15212.1 ATTCACAATATCTTGTACTTACAAATTTCATATCGAAAATGCAA 16 12425346 0.939407031 2 16 150 1 1.342422681 0.045454545 0.25 0.454545455 16 0 0 22 2R:12425333-12425376 7 CG8520 FBtr0303222|FBtr0087926 12425250|12425250 12425459|12425459 GTACTTA 7mer-m8 dme-miR-252-5p 2R + 12425335 12425367 3'utr CG8520 FlyBase G11545.1 TCACAATATCTTGTACTTACAAATTTCATATCG 13 12425346 0.727559962 2 12 101 1 1.255272505 0.111111111 0.230769231 0.444444444 13 0 0 18 2R:12425335-12425367 7 14 1035 FBgn0033734 185.89 13.06 20.03333333 0.075313357 1.071975498 0.698835275 1 1 1 0.1 dme-miR-1008-3p 8mer-A1 AGCTGTGA 2R 12436888 12436895 + 2R_12436888_12436895_+ 0.640040098 0.639802116 0.639921107 0.000168291 CG30051 FBtr0114521 12436846 12436990 2R + 12436864 12436958 3'utr CG30051 FlyBase G15218.1 ACATGCAGTTAAAAGCACAAGTAGAGCTGTGAAATTATATGTTATGCTTTAAATGGATTTTCCTGTCATCTAGATGTAGTTTGCTGCACAGCTCT 35 12436885 0.965363005 11 31 303 0.894736842 1.531478917 0.289473684 0.085714286 0.157894737 35 4 0 34 2R:12436864-12436958 8 CG30051 FBtr0114521 12436846 12436990 AGCTGTGA 8mer-A1 dme-miR-1008-3p 2R + 12436864 12436956 3'utr CG30051 FlyBase G11549.1 ACATGCAGTTAAAAGCACAAGTAGAGCTGTGAAATTATATGTTATGCTTTAAATGGATTTTCCTGTCATCTAGATGTAGTTTGCTGCACAGCT 25 12436898 0.787843206 12 23 182 0.925 1.267171728 0.2 0.44 0.65 25 2 1 37 2R:12436864-12436956 8 16.5 1036 FBgn0050051 28.33333333 5.406666667 8.236666667 0.582352941 3.051787916 2.003237556 3 -10 -3.5 0.1 dme-miR-79-3p 7mer-m8 TAGCTTT 2R 12452116 12452122 + 2R_12452116_12452122_+ 0.620200782 0.620203012 0.620201897 1.56E-06 Dyb FBtr0305077|FBtr0100298|FBtr0087929|FBtr0308613|FBtr0087930 12452039|12452039|12451987|12452039|12451987 12452916|12452916|12452916|12452916|12452916 2R + 12452028 12452156 stop_codon Dyb FlyBase G15221.1 GCAGAAGAACTAAGAACTGGCTACCAGTGGAAACCGCAGGACTGGGAATCTCCAGAGGCAGCTGGATGGATGAAGACGAATTCTCGCTTAGCTTTCTACCTTACCTTAACTCATACGTTGACTTAGAGC 22 12452115 0.983257715 12 22 141 1 1.361727836 0.260869565 0.045454545 0.086956522 22 0 0 23 2R:12452028-12452156 7 Dyb FBtr0087930|FBtr0087929|FBtr0308613|FBtr0305077|FBtr0100298 12451987|12451987|12452039|12452039|12452039 12452916|12452916|12452916|12452916|12452916 TAGCTTT 7mer-m8 dme-miR-79-3p 2R + 12452071 12452134 3'utr Dyb FlyBase G11550.1 GGGAATCTCCAGAGGCAGCTGGATGGATGAAGACGAATTCTCGCTTAGCTTTCTACCTTACCTT 17 12452115 0.98766672 5 17 151 1 1.380211242 0.083333333 0.294117647 0.5 17 0 0 24 2R:12452071-12452134 7 13 1037 FBgn0033739 253.3333333 9.266666667 14.15666667 0.051315789 1.402877698 0.918295267 1 1 1 0.1 dme-miR-33-5p 6mer2-7 AATGCA 2R 12464944 12464949 + 2R_12464944_12464949_+ 0.999983514 0.992194849 0.996089181 0.005507443 Lac FBtr0087933 12464880 12465630 2R + 12464881 12464959 3'utr Lac FlyBase G15229.1 AGCCAATGGGCCCACGGCCGTCGACTCCAAGCGCTTCAGGTCCAATCCATCAACCAGCCCTCGAATGCATAAAACATAT 17 12464948 0.957507981 7 13 59 0.80952381 0.753327667 0.047619048 0.235294118 0.380952381 17 2 2 17 2R:12464881-12464959 6 Lac FBtr0087933 12464880 12465630 AATGCA 6mer2-7 dme-miR-33-5p 2R + 12464872 12464957 stop_codon Lac FlyBase G11558.1 CGCCAGATAAGCCAATGGGCCCACGGCCGTCGACTCCAAGCGCTTCAGGTCCAATCCATCAACCAGCCCTCGAATGCATAAAACAT 17 12464946 0.998399383 5 16 44 1 1.431363764 0 0.352941176 0.592592593 17 0 0 27 2R:12464872-12464957 6 9 1038 FBgn0010238 279.02 15.78666667 24.22666667 0.032255752 0.570101351 0.371491469 -4 -2 -3 0.1 dme-miR-184-3p 6mer2-7 CCGTCC 2R 12465246 12465251 + 2R_12465246_12465251_+ 0.999983892 0.99999442 0.999989156 7.42E-06 Lac FBtr0087933 12464880 12465630 2R + 12464976 12465277 3'utr Lac FlyBase G15230.1 GAAAACAAACATCGTGTAACCGCGCAATAGATGTCTCAAACGATTTCGGACACACCAACCCACATCCAGTTCTCAGTTCGTTTTGTAGCTTCTGCTTCCGTTTCCGTATAGTCCAGCCCAATTTTTGTACGTCCAATATTATGTCTTAAGTTAAGTATGATAAGTGAAGGGCCAACGATAACTAGACTATAATTTATTAGCACCCTAGAGCCGAACTCAAACCGAAATTAGACTCCAGCCCAGCCGTAAACGATGCATTTCACCTTGATCCCGTCCGTTTTGCTTTCTGATCTGGCACTGTA 852 12465244 0.954398896 52 806 7154 0.953712633 1.881252939 0.128254581 0.170187793 0.318225651 852 36 12 989 2R:12464976-12465277 6 Lac FBtr0087933 12464880 12465630 CCGTCC 6mer2-7 dme-miR-184-3p 2R + 12465016 12465303 3'utr Lac FlyBase G11559.1 CGATTTCGGACACACCAACCCACATCCAGTTCTCAGTTCGTTTTGTAGCTTCTGCTTCCGTTTCCGTATAGTCCAGCCCAATTTTTGTACGTCCAATATTATGTCTTAAGTTAAGTATGATAAGTGAAGGGCCAACGATAACTAGACTATAATTTATTAGCACCCTAGAGCCGAACTCAAACCGAAATTAGACTCCAGCCCAGCCGTAAACGATGCATTTCACCTTGATCCCGTCCGTTTTGCTTTCTGATCTGGCACTGTATATGTTTTAAATATTTTAATCTAAGC 512 12465244 0.985407996 44 490 4033 0.963824289 2.270678836 0.111111111 0.349609375 0.569767442 512 25 3 746 2R:12465016-12465303 6 498.5 1039 FBgn0010238 279.02 15.78666667 24.22666667 1.786610279 31.57728041 20.57649972 2 2 2 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 12487565 12487572 - 2R_12487565_12487572_- 0.50005002 0.498240385 0.499145202 0.00127958 fdl FBtr0346633 12487449 12488439 2R - 12487555 12487618 3'utr fdl FlyBase G22470.1 TTCAACATTTGGAATGATTGATAGGATCCTTATGCAACTTGTTTTCGTACTTAAGACTTTCAAA 11 12487588 0.669967709 10 11 89 1 1.041392685 0.181818182 0 0 11 0 0 11 2R:12487555-12487618 8 fdl FBtr0346633 12487449 12488439 GTACTTAA 8mer-A1 dme-miR-252-5p 2R - 12487546 12487616 3'utr fdl FlyBase G17050.1 CAACATTTGGAATGATTGATAGGATCCTTATGCAACTTGTTTTCGTACTTAAGACTTTCAAAGAAAATATC 11 12487600 0.98570665 8 10 88 0.928571429 1.113943352 0 0.181818182 0.357142857 11 1 0 13 2R:12487546-12487616 8 3.5 1040 FBgn0045063 1364.66 46.87666667 71.74333333 0.002564741 0.074664012 0.048785021 16 28 22 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2R 12507934 12507940 - 2R_12507934_12507940_- 0.807032715 0.808516763 0.807774739 0.001049417 vis FBtr0087945|FBtr0087945|FBtr0087944|FBtr0087944 12507894|12507894|12507894|12507894 12508268|12508268|12508268|12508268 2R - 12507925 12507954 3'utr vis FlyBase G22491.1 GTGTACACTACTGATACTTAAATAAAACAA 5 12507943 0.798321824 2 5 32 1 0.698970004 0.6 0 0 5 0 0 5 2R:12507925-12507954 7 vis FBtr0087945|FBtr0087945|FBtr0087944|FBtr0087944 12507894|12507894|12507894|12507894 12508268|12508268|12508268|12508268 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2R - 12507928 12507970 3'utr vis FlyBase G17062.1 TTTTAAACTTAACATTGTGTACACTACTGATACTTAAATAAAA 6 12507943 0.982665454 2 5 40 1 1.041392685 0.272727273 0.333333333 0.636363636 6 0 0 11 2R:12507928-12507970 7 4.5 1041 FBgn0033748 6.173333333 0.356666667 0.556666667 0.728941685 12.61682243 8.083832335 3 3 3 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2R 12511757 12511763 - 2R_12511757_12511763_- 0.796509732 0.808464368 0.80248705 0.008453249 achi FBtr0339635|FBtr0339635|FBtr0087942|FBtr0087942|FBtr0087943|FBtr0087943 12511532|12511532|12511532|12511532|12511532|12511532 12512070|12512070|12512070|12512070|12512070|12512070 2R - 12511728 12511820 3'utr achi FlyBase G22494.1 AACAAATCGACTTAGTTTTGGACCTGACTCTTTTAAACTTAACATGTACACTACTGATACTTAAATAAAACATAAACAAGCATTTGAAATACA 12 12511766 0.985463607 6 12 97 1 1.113943352 0.153846154 0.083333333 0.153846154 12 0 0 13 2R:12511728-12511820 7 achi FBtr0339635|FBtr0339635|FBtr0087942|FBtr0087942|FBtr0087943|FBtr0087943 12511532|12511532|12511532|12511532|12511532|12511532 12512070|12512070|12512070|12512070|12512070|12512070 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2R - 12511730 12511817 3'utr achi FlyBase G17065.1 AAATCGACTTAGTTTTGGACCTGACTCTTTTAAACTTAACATGTACACTACTGATACTTAAATAAAACATAAACAAGCATTTGAAATA 8 12511766 0.980265247 6 8 60 1 0.954242509 0 0.125 0.222222222 8 0 0 9 2R:12511730-12511817 7 4.5 1042 FBgn0033749 292.4933333 16.57 25.38 0.015384966 0.271575136 0.177304965 3 3 3 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 2R 12563256 12563261 + 2R_12563256_12563261_+ 0.997692361 0.995934655 0.996813508 0.001242882 fra FBtr0087821|FBtr0339649|FBtr0087822 12563118|12563118|12563118 12564184|12564184|12564184 2R + 12563199 12563366 3'utr fra FlyBase G15273.1 CTGTTTTATTTTATTGATTTAACTCGAATTTGTGAAATGCAGTGAACCGACTTGAATTGTGTTTCCCTCCAGCGAGGTTCGTTTAGCTTAAGTTAAACAAATGTGCGATATATTAATGACCGAAAAGAATTGTAAATACGAACGACGCCGCCATATAAATTTTTAAGT 537 12563261 0.906356551 27 516 4357 0.962204724 2.00788996 0.247244094 0.137802607 0.270866142 537 19 5 611 2R:12563199-12563366 6 fra FBtr0339649|FBtr0087822|FBtr0087821 12563118|12563118|12563118 12564184|12564184|12564184 TGTGTT 6mer3-8 dme-miR-317-3p 2R + 12563211 12563357 3'utr fra FlyBase G11584.2 ATTGATTTAACTCGAATTTGTGAAATGCAGTGAACCGACTTGAATTGTGTTTCCCTCCAGCGAGGTTCGTTTAGCTTAAGTTAAACAAATGTGCGATATATTAATGACCGAAAAGAATTGTAAATACGAACGACGCCGCCATATAAA 387 12563261 0.937597371 22 376 3107 0.974182444 2.053846427 0.244406196 0.354005168 0.569707401 387 11 4 566 2R:12563211-12563357 6 319.5 1043 FBgn0011592 435.29 8.333333333 12.78666667 0.73399343 38.34 24.98696559 -5 -5 -5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2R 12563742 12563747 + 2R_12563742_12563747_+ 0.994708397 0.820245585 0.907476991 0.123363829 fra FBtr0087821|FBtr0339649|FBtr0087822 12563118|12563118|12563118 12564184|12564184|12564184 2R + 12563664 12563760 3'utr fra FlyBase G15278.1 AGAACGTACTTTTAATCTATTGTAACCCAATCAAACAATCAAAATCATTCTATCTAGACTTGTCCCCTAAAGTGTTCTTCTAGTTTGTTTATCCATT 74 12563741 0.993668423 11 64 798 0.88372093 1.403692338 0.093023256 0.148648649 0.26744186 74 8 2 76 2R:12563664-12563760 6 fra FBtr0339649|FBtr0087822|FBtr0087821 12563118|12563118|12563118 12564184|12564184|12564184 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 12563704 12563810 3'utr fra FlyBase G11586.1 AAAATCATTCTATCTAGACTTGTCCCCTAAAGTGTTCTTCTAGTTTGTTTATCCATTCATACGTATGAGTTTGATACGTGCCATTCAATGATTTGTCGCCAATCCAA 66 12563741 0.990837369 13 63 649 0.918367347 1.255272505 0.051020408 0.378787879 0.581632653 66 4 4 90 2R:12563704-12563810 6 44.5 1044 FBgn0011592 435.29 8.333333333 12.78666667 0.102230697 5.34 3.480187696 1 1 1 0.1 dme-miR-980-3p 6mer3-8 GGCAGC 2R 12575627 12575632 - 2R_12575627_12575632_- 0.977505933 0.83149673 0.904501332 0.103244095 Sin3A FBtr0303565|FBtr0087889|FBtr0087890|FBtr0339651|FBtr0087887|FBtr0347014|FBtr0339650|FBtr0087888|FBtr0304683|FBtr0303566 12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238 12575974|12578533|12575974|12577703|12575974|12578162|12575974|12577560|12575974|12577560 2R - 12575403 12575639 3'utr Sin3A FlyBase G22507.1 TTACGACGGCAGCGTCCTGTTTTATTGATGCGCTTTTAGAATTAAGATATAAAGTTTATACGCCTAGAGCCACATACACCTTAAACACAATCGCAAGACCACAATTTAAGTCACGGATATTTTTAACGATTTTGCACTAGAAACCGATCGAGACAGTTGTGCTAGTAACTAGGAACCAGAACACGTCTGTTTAGTGTTTTAAGATTTTTTAAAACCAAGCTCTTTTACTTTATCATA 514 12575604 0.969973749 43 501 4872 0.976109215 2.280274774 0.232081911 0.110894942 0.220136519 514 12 2 572 2R:12575403-12575639 6 Sin3A FBtr0303566|FBtr0304683|FBtr0087888|FBtr0339650|FBtr0347014|FBtr0087887|FBtr0339651|FBtr0087890|FBtr0087889|FBtr0303565 12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238 12577560|12575974|12577560|12575974|12578162|12575974|12577703|12575974|12578533|12575974 GGCAGC 6mer3-8 dme-miR-980-3p 2R - 12575433 12575643 3'utr Sin3A FlyBase G17075.2 AATTTTACGACGGCAGCGTCCTGTTTTATTGATGCGCTTTTAGAATTAAGATATAAAGTTTATACGCCTAGAGCCACATACACCTTAAACACAATCGCAAGACCACAATTTAAGTCACGGATATTTTTAACGATTTTGCACTAGAAACCGATCGAGACAGTTGTGCTAGTAACTAGGAACCAGAACACGTCTGTTTAGTGTTTTAAGATTT 313 12575604 0.982530763 32 304 3055 0.974683544 2.187520721 0.261603376 0.357827476 0.575949367 313 10 2 462 2R:12575433-12575643 6 14.5 1045 FBgn0022764 4529.02 67.97 103.85 0.003201576 0.21332941 0.139624458 -28 -28 -28 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 2R 12575718 12575724 - 2R_12575718_12575724_- 0.78291117 0.78290825 0.78290971 2.05E-06 Sin3A FBtr0303565|FBtr0087889|FBtr0087890|FBtr0339651|FBtr0087887|FBtr0347014|FBtr0339650|FBtr0087888|FBtr0304683|FBtr0303566 12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238 12575974|12578533|12575974|12577703|12575974|12578162|12575974|12577560|12575974|12577560 2R - 12575658 12575952 3'utr Sin3A FlyBase G22508.1 CGGCAGTGGTCGCTGCATGGCCAGATTCTTCATTCACATGACGACAATGAGAAGATGTGGGATGAATTGCCTGCATTGAAATAAATAGTGTTTTAAATGTGATACCAGTTCCTCGACGCGGTCATCGAGATTGCAGCTATACCAACGCGCGATCGACTGTTTAATGTCCGGCATGGCATTGGGCTCTGGAAATTGATTGATGAACGAAGGAAAGCTCTTTTTCATATTGTACAAAAAGTCATTTAATCTTAGGCGAAAGTGCTCCTAAATAAGAATTTTATAGTCTTACGTTGCA 413 12575726 0.840210234 60 385 2778 0.939516129 2.066325925 0.221774194 0.157384988 0.298387097 413 27 3 466 2R:12575658-12575952 7 Sin3A FBtr0303566|FBtr0304683|FBtr0087888|FBtr0339650|FBtr0347014|FBtr0087887|FBtr0339651|FBtr0087890|FBtr0087889|FBtr0303565 12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238 12577560|12575974|12577560|12575974|12578162|12575974|12577703|12575974|12578533|12575974 GTACAAA 7mer-A1 dme-miR-305-5p 2R - 12575667 12575952 3'utr Sin3A FlyBase G17076.1 CGGCAGTGGTCGCTGCATGGCCAGATTCTTCATTCACATGACGACAATGAGAAGATGTGGGATGAATTGCCTGCATTGAAATAAATAGTGTTTTAAATGTGATACCAGTTCCTCGACGCGGTCATCGAGATTGCAGCTATACCAACGCGCGATCGACTGTTTAATGTCCGGCATGGCATTGGGCTCTGGAAATTGATTGATGAACGAAGGAAAGCTCTTTTTCATATTGTACAAAAAGTCATTTAATCTTAGGCGAAAGTGCTCCTAAATAAGAATTTTATAGTCT 271 12575726 0.984678798 50 234 1867 0.871536524 1.760924848 0.214105793 0.332103321 0.544080605 271 46 5 346 2R:12575667-12575952 7 102 1046 FBgn0022764 4529.02 67.97 103.85 0.022521428 1.500662057 0.982185845 2 2 2 0.1 dme-miR-33-5p 6mer3-8 CAATGC 2R 12576069 12576074 - 2R_12576069_12576074_- 0.99999909 0.999030177 0.999514633 0.000685116 Sin3A FBtr0087889|FBtr0339651|FBtr0347014|FBtr0087888|FBtr0303566 12575238|12575238|12575238|12575238|12575238 12578533|12577703|12578162|12577560|12577560 2R - 12576059 12576208 3'utr Sin3A FlyBase G22510.1 GTTCCGGCGGTCAATTCCGCGCCATCAGGCTCAGTTTCAACGGTGAACAATGTACAGGGCTCGGCGGCAGTATCCTCAACTTCCCACTCGATGTGCAACAGTAGCATTTTGTCCGCGGACTCCACCACCAATACCAATGCGTCAGCACAG 25 12576076 0.948718114 13 24 101 0.933333333 1.447158031 0.3 0.2 0.333333333 25 2 0 28 2R:12576059-12576208 6 Sin3A FBtr0303566|FBtr0087888|FBtr0347014|FBtr0339651|FBtr0087889 12575238|12575238|12575238|12575238|12575238 12577560|12577560|12578162|12577703|12578533 CAATGC 6mer3-8 dme-miR-33-5p 2R - 12576062 12576170 3'utr Sin3A FlyBase G17077.1 AACGGTGAACAATGTACAGGGCTCGGCGGCAGTATCCTCAACTTCCCACTCGATGTGCAACAGTAGCATTTTGTCCGCGGACTCCACCACCAATACCAATGCGTCAGCA 16 12576077 0.986292657 8 16 63 1 1.361727836 0.173913043 0.375 0.565217391 16 0 0 23 2R:12576062-12576170 6 7 1047 FBgn0022764 4529.02 67.97 103.85 0.001545588 0.102986612 0.067404911 2 3 2.5 0.1 dme-miR-2a-2-5p 7mer-m1 GATGAGG 2R 12611362 12611368 + 2R_12611362_12611368_+ 0.825497734 0.796280794 0.810889264 0.020659468 Amph FBtr0087828|FBtr0333099|FBtr0333100 12611088|12611088|12611088 12612068|12612068|12612068 2R + 12611356 12611407 3'utr Amph FlyBase G15296.1 CACACAGATGAGGAATGAGAGAGAGAATATTTTGAAAATGTTTCAAACATTA 8 12611385 0.976809888 3 7 48 0.888888889 0.602059991 0 0.125 0.222222222 8 0 1 8 2R:12611356-12611407 7 Amph FBtr0087828|FBtr0333099|FBtr0333100 12611088|12611088|12611088 12612068|12612068|12612068 GATGAGG 7mer-m1 dme-miR-2a-2-5p 2R + 12611361 12611396 3'utr Amph FlyBase G11596.1 AGATGAGGAATGAGAGAGAGAATATTTTGAAAATGT 5 12611384 0.957886951 4 4 30 0.833333333 0.698970004 0 0.2 0.333333333 5 1 0 5 2R:12611361-12611396 7 3.5 1048 FBgn0027356 371.21 14.13 21.53333333 0.009428625 0.247699929 0.1625387 -23 -22 -22.5 0.1 dme-miR-33-5p 7mer-m1 AATGCAC 2R 12616087 12616093 + 2R_12616087_12616093_+ 0.829047338 0.822105307 0.825576323 0.004908735 CG45086 FBtr0344532|FBtr0344531 12613656|12613656 12619820|12619820 2R + 12616010 12616097 5'utr-coding CG45086 FlyBase G15300.1 AGCAATAGCAATAGCCAAAGAGAGCCTGGATCGTAAGCGCTGGAGGAGGTCTGCAGAGCGAGCAAAGCCGAAGTACAAATGCACCAAT 13 12616089 0.994925438 5 12 26 0.888888889 1.204119983 0.166666667 0.307692308 0.5 13 2 0 16 2R:12616010-12616097 7 CG45086 FBtr0344531|FBtr0344532 12613656|12613656 12619820|12619820 AATGCAC 7mer-m1 dme-miR-33-5p 2R + 12615988 12616092 5'utr-coding CG45086 FlyBase G11601.1 AACTTAGCGTAGACCCGTAATTAGCAATAGCAATAGCCAAAGAGAGCCTGGATCGTAAGCGCTGGAGGAGGTCTGCAGAGCGAGCAAAGCCGAAGTACAAATGCA 12 12616089 0.935843116 7 9 37 0.782608696 0.954242509 0.086956522 0.583333333 0.782608696 12 4 1 18 2R:12615988-12616092 6 4 1049 FBgn0266487 1140.346667 45.66 70.03666667 0.003507705 0.08760403 0.057112941 -2 -2 -2 0.1 dme-miR-965-3p 6mer2-7 ACGCTT 2R 12616865 12616870 + 2R_12616865_12616870_+ 0.774291591 0.696088966 0.735190278 0.055297589 CG45086 FBtr0344532|FBtr0344531 12613656|12613656 12619820|12619820 2R + 12616848 12616888 3'utr CG45086 FlyBase G15301.1 ACTTGAATGCCATCAAAACGCTTTGGGACGATGCTGGCATC 22 12616871 0.772459595 4 22 100 1 1.397940009 0.36 0.136363636 0.24 22 0 0 25 2R:12616848-12616888 6 CG45086 FBtr0344531|FBtr0344532 12613656|12613656 12619820|12619820 ACGCTT 6mer2-7 dme-miR-965-3p 2R + 12616848 12616909 3'utr CG45086 FlyBase G11604.1 ACTTGAATGCCATCAAAACGCTTTGGGACGATGCTGGCATCCAGGAGTGCTATGATCGTCGT 9 12616871 0.959263823 3 8 43 0.9 0.954242509 0.3 0.111111111 0.2 9 1 0 9 2R:12616848-12616909 6 14 1050 FBgn0266487 1140.346667 45.66 70.03666667 0.012276968 0.306614104 0.199895293 -6 -6 -6 0.1 dme-miR-995-5p 6mer3-8 AATTCG 2R 12618047 12618052 + 2R_12618047_12618052_+ 0.989913816 0.695191378 0.842552597 0.208400208 CG45086 FBtr0344532|FBtr0344531 12613656|12613656 12619820|12619820 2R + 12617992 12618095 3'utr CG45086 FlyBase G15304.1 AATGGAGGAATCTAAAGCTTTATTTCGTACTATAATTACATACCCTTGGTTTCAAAATTCGTCAGTTATTCTTTTCCTGAATAAGAAGGACTTGTTGGAAGAGA 25 12618049 0.987974227 11 24 210 0.96969697 1.204119983 0.060606061 0.2 0.393939394 25 0 1 32 2R:12617992-12618095 6 CG45086 FBtr0344531|FBtr0344532 12613656|12613656 12619820|12619820 AATTCG 6mer3-8 dme-miR-995-5p 2R + 12617993 12618060 3'utr CG45086 FlyBase G11606.1 ATGGAGGAATCTAAAGCTTTATTTCGTACTATAATTACATACCCTTGGTTTCAAAATTCGTCAGTTAT 17 12618037 0.788994099 8 14 151 0.869565217 1 0.043478261 0.352941176 0.52173913 17 2 1 20 2R:12617993-12618060 6 10 1051 FBgn0266487 1140.346667 45.66 70.03666667 0.008769263 0.219010074 0.142782352 -2 10 4 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 2R 12619174 12619180 + 2R_12619174_12619180_+ 0.521223823 0.521223849 0.521223836 0 CG45086 FBtr0344532|FBtr0344531 12613656|12613656 12619820|12619820 2R + 12619137 12619195 stop_codon CG45086 FlyBase G15306.1 TTTGGTCTAAACTGGATTTGGATCGAAAAACTATTTTTGTGATTTTTATACAAACACAC 34 12619172 0.865569687 9 33 412 0.976744186 1.62324929 0 0.176470588 0.348837209 34 1 0 42 2R:12619137-12619195 7 CG45086 FBtr0344531|FBtr0344532 12613656|12613656 12619820|12619820 TGTGATT 7mer-m1 dme-miR-308-3p 2R + 12619137 12619189 stop_codon CG45086 FlyBase G11608.1 TTTGGTCTAAACTGGATTTGGATCGAAAAACTATTTTTGTGATTTTTATACAA 18 12619173 0.993389353 5 18 219 1 1.431363764 0 0.388888889 0.592592593 18 0 0 27 2R:12619137-12619189 7 24 1052 FBgn0266487 1140.346667 45.66 70.03666667 0.021046232 0.525624179 0.342677645 2 1 1.5 0.1 dme-miR-184-3p 8mer-A1 TCCGTCCA 2R 12621531 12621538 + 2R_12621531_12621538_+ 0.63113637 0.631136335 0.631136352 7.07E-08 Galphaq FBtr0304955 12619145 12623197 2R + 12621497 12621551 3'utr Galphaq FlyBase G15313.1 GACATTCACACACTGACATACATATATATAGTTTTCCGTCCAATGAATTGCATCA 41 12621530 0.986135704 6 40 339 0.979591837 1.681241237 0.306122449 0.170731707 0.306122449 41 1 0 48 2R:12621497-12621551 8 Galphaq FBtr0304955 12619145 12623197 TCCGTCCA 8mer-A1 dme-miR-184-3p 2R + 12621511 12621545 3'utr Galphaq FlyBase G11613.1 GACATACATATATATAGTTTTCCGTCCAATGAATT 23 12621530 0.699414063 3 21 186 0.896551724 1.414973348 0.413793103 0.260869565 0.413793103 23 3 0 26 2R:12621511-12621545 8 31.5 1053 FBgn0004435 2624.776667 94.95333333 145.51 0.012001021 0.331741908 0.216479967 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 12628846 12628852 - 2R_12628846_12628852_- 0.801906586 0.801967517 0.801937051 4.31E-05 muskelin FBtr0087886|FBtr0087886|FBtr0087886|FBtr0333103|FBtr0333103|FBtr0333103 12628695|12628695|12628695|12628695|12628695|12628695 12629027|12629027|12629027|12629027|12629027|12629027 2R - 12628818 12628862 3'utr muskelin FlyBase G22558.1 ATGATTTTATTGTGATAGTTCACGTGTACTGAAACCCCGGCTAAA 35 12628837 0.786825647 7 34 301 0.977272727 1.33243846 0.386363636 0.228571429 0.386363636 35 0 1 43 2R:12628818-12628862 7 muskelin FBtr0333103|FBtr0333103|FBtr0333103|FBtr0087886|FBtr0087886|FBtr0087886 12628695|12628695|12628695|12628695|12628695|12628695 12629027|12629027|12629027|12629027|12629027|12629027 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 12628818 12628882 3'utr muskelin FlyBase G17109.1 ATGCAAAGCATGACATATATATGATTTTATTGTGATAGTTCACGTGTACTGAAACCCCGGCTAAA 22 12628838 0.90473748 7 20 158 0.935483871 1.462397998 0.35483871 0.272727273 0.483870968 22 2 0 29 2R:12628818-12628882 7 25 1054 FBgn0033757 131.3333333 5.313333333 8.116666667 0.19035533 4.705144291 3.080082136 -15 -14 -14.5 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2R 12640418 12640424 + 2R_12640418_12640424_+ 0.808809098 0.808404245 0.808606671 0.000286308 Iswi FBtr0087843|FBtr0087843|FBtr0087842|FBtr0087842|FBtr0087841|FBtr0087841 12640336|12640336|12640336|12640336|12640336|12640336 12640628|12640628|12640628|12640628|12640628|12640628 2R + 12640341 12640472 3'utr Iswi FlyBase G15351.1 GACAAAGCAAACAGATATTTTTCTGAGATTCGGCTCTACACTCAGCACTAGGCAGTTAAATAGTTAAGACAAGCGATTACTTAAACATATTTTACTCTATATAGTTAATAGTTCATATCTCACGCCGGAAGC 67 12640417 0.972699139 19 64 402 0.966292135 1.633468456 0.101123596 0.23880597 0.426966292 67 2 1 86 2R:12640341-12640472 7 Iswi FBtr0087843|FBtr0087843|FBtr0087842|FBtr0087842|FBtr0087841|FBtr0087841 12640336|12640336|12640336|12640336|12640336|12640336 12640628|12640628|12640628|12640628|12640628|12640628 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2R + 12640358 12640437 3'utr Iswi FlyBase G11638.1 TTTTTCTGAGATTCGGCTCTACACTCAGCACTAGGCAGTTAAATAGTTAAGACAAGCGATTACTTAAACATATTTTACTC 18 12640417 0.880993099 7 17 109 0.928571429 1.414973348 0.035714286 0.444444444 0.642857143 18 2 0 26 2R:12640358-12640437 7 16.5 1055 FBgn0011604 1337.66 45.99333333 70.94 0.012334973 0.358747645 0.232590922 1 1 1 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 12640583 12640589 + 2R_12640583_12640589_+ 0.661593968 0.661346527 0.661470247 0.000175009 Iswi FBtr0087843|FBtr0087842|FBtr0087841 12640336|12640336|12640336 12640628|12640628|12640628 2R + 12640538 12640622 3'utr Iswi FlyBase G15352.1 ACATTACTATTGCGTGCCGCTGTATTCTATTCCAAATAATTGTATTGTGTTCTAAGACTATAATCATTATATTTATATAAATCAA 64 12640582 0.719276264 16 63 566 0.973684211 1.86923172 0.118421053 0.1875 0.315789474 64 2 0 74 2R:12640538-12640622 7 Iswi FBtr0087843|FBtr0087842|FBtr0087841 12640336|12640336|12640336 12640628|12640628|12640628 TGTGTTC 7mer-m8 dme-miR-317-3p 2R + 12640504 12640623 3'utr Iswi FlyBase G11640.1 AAGTTTTTTTAAACACCCGCCTACACATCCGACTACATTACTATTGCGTGCCGCTGTATTCTATTCCAAATAATTGTATTGTGTTCTAAGACTATAATCATTATATTTATATAAATCAAC 44 12640582 0.987468251 16 43 378 0.985714286 1.838849091 0.2 0.409090909 0.628571429 44 1 0 69 2R:12640504-12640623 7 27 1056 FBgn0011604 1337.66 45.99333333 70.94 0.020184501 0.5870416 0.380603327 1 1 1 0.1 dme-miR-2a-2-5p 6mer2-7 GATGAG 2R 12659919 12659924 - 2R_12659919_12659924_- 0.999605338 0.999976945 0.999791141 0.000262761 nemy FBtr0339740|FBtr0087870|FBtr0087867|FBtr0087869|FBtr0302151|FBtr0339742|FBtr0339741|FBtr0087868 12659495|12659495|12659495|12659495|12659495|12659495|12659495|12659587 12660243|12660243|12660243|12660243|12660243|12660243|12660243|12660243 2R - 12659911 12660018 3'utr nemy FlyBase G22574.1 ACATCATACACTTAGACTACTCCATATGGCTATAATCAAAACCTTTGCCCACTTTCAATCTCTCAGTAGGTGTGTAGGATTAGGAATCTCAGCAGATGAGCAGAAGAC 24 12659947 0.949103642 12 22 163 0.923076923 1.079181246 0.076923077 0.083333333 0.153846154 24 1 1 24 2R:12659911-12660018 6 nemy FBtr0302151|FBtr0339742|FBtr0339741|FBtr0087868|FBtr0339740|FBtr0087870|FBtr0087867|FBtr0087869 12659495|12659495|12659495|12659587|12659495|12659495|12659495|12659495 12660243|12660243|12660243|12660243|12660243|12660243|12660243|12660243 GATGAG 6mer2-7 dme-miR-2a-2-5p 2R - 12659915 12659952 3'utr nemy FlyBase G17121.1 TAGGTGTGTAGGATTAGGAATCTCAGCAGATGAGCAGA 8 12659945 0.65022374 5 7 48 0.866666667 1.113943352 0.333333333 0.625 0.8 8 2 0 13 2R:12659915-12659952 6 6 1057 FBgn0261673 7.666666667 0.46 0.703333333 0.782608696 13.04347826 8.530805687 23 21 22 0.1 dme-miR-34-5p 6mer2-7 ACTGCC 2R 1266501 1266506 + 2R_1266501_1266506_+ 0.999999868 0.999999996 0.999999932 7.07E-08 CG40191 FBtr0113825 1266025 1267747 2R + 1266460 1266520 3'utr CG40191 FlyBase G12545.1 ATACATACAAGCTGTAATATGTTGCGCTATACTTCAAAGTTACTGCCTTACACTGACCGAA 22 1266499 0.961511361 6 22 164 1 1.414973348 0.115384615 0.181818182 0.307692308 22 0 0 26 2R:1266460-1266520 6 CG40191 FBtr0113825 1266025 1267747 ACTGCC 6mer2-7 dme-miR-34-5p 2R + 1266458 1266512 3'utr CG40191 FlyBase G9611.1 TTATACATACAAGCTGTAATATGTTGCGCTATACTTCAAAGTTACTGCCTTACAC 14 1266499 0.980579351 7 14 96 1 1.322219295 0.142857143 0.357142857 0.571428571 14 0 0 21 2R:1266458-1266512 6 15.5 1058 FBgn0058191 1436.35 98.49 150.6766667 0.010791242 0.157376383 0.102869279 2 2 2 0.1 dme-miR-252-5p 6mer3-8 GTACTT 2R 12670961 12670966 - 2R_12670961_12670966_- 0.999777633 0.999378572 0.999578103 0.000282136 CG42708 FBtr0302976|FBtr0302977|FBtr0302975|FBtr0302974|FBtr0302973|FBtr0344191|FBtr0302972 12670481|12670481|12670481|12670481|12670604|12670481|12670604 12671175|12671175|12671175|12671175|12671175|12671175|12671175 2R - 12670817 12670996 3'utr CG42708 FlyBase G22583.1 CGAGGCGGATCCACTGCACGAGCGGCATTTGTACTTGTACTTGGTAGCGCTTAGTTAGCCACAAAAATTCCATGTTATCCTACGAAACAATGACAATAATCTTAACGGATATCTAACTTTCCCACATAACTGGGGTCTGTGACCTGCCTAAATGTATTGCATTCGTACTTGTCAATTGAT 105 12670968 0.984096722 21 102 806 0.959016393 2.068185862 0.073770492 0.161904762 0.278688525 105 5 0 117 2R:12670817-12670996 6 CG42708 FBtr0302974|FBtr0302975|FBtr0302977|FBtr0302976|FBtr0302972|FBtr0344191|FBtr0302973 12670481|12670481|12670481|12670481|12670604|12670481|12670604 12671175|12671175|12671175|12671175|12671175|12671175|12671175 GTACTT 6mer3-8 dme-miR-252-5p 2R - 12670926 12670991 3'utr CG42708 FlyBase G17127.1 CGGATCCACTGCACGAGCGGCATTTGTACTTGTACTTGGTAGCGCTTAGTTAGCCACAAAAATTCC 30 12670968 0.986021563 6 29 243 0.977272727 1.633468456 0.045454545 0.266666667 0.5 30 1 0 43 2R:12670926-12670991 6 54 1059 FBgn0261625 1259.506667 54.11 83.17333333 0.042873929 0.997967104 0.649246553 2 2 2 0.1 dme-miR-1006-3p 7mer-m8 CGAATTT 2R 12691440 12691446 - 2R_12691440_12691446_- 0.661028519 0.660688765 0.660858642 0.000240204 CG8768 FBtr0087871 12691306 12691537 2R - 12691421 12691461 3'utr CG8768 FlyBase G22611.1 AAGCGCAAATTAAAACGAATTTCTGCGATAGGGGGATTTAT 34 12691441 0.697862937 2 32 214 0.944444444 1.531478917 0.027777778 0.058823529 0.111111111 34 2 0 34 2R:12691421-12691461 7 CG8768 FBtr0087871 12691306 12691537 CGAATTT 7mer-m8 dme-miR-1006-3p 2R - 12691420 12691455 3'utr CG8768 FlyBase G17144.1 AAATTAAAACGAATTTCTGCGATAGGGGGATTTATG 26 12691441 0.682294446 3 25 158 0.971428571 1.531478917 0 0.230769231 0.428571429 26 1 0 34 2R:12691420-12691455 7 30 1060 FBgn0033769 43.33333333 4.476666667 6.923333333 0.692307692 6.701414743 4.333172845 -5 -5 -5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 12750677 12750683 + 2R_12750677_12750683_+ 0.638475147 0.647113721 0.642794434 0.006108413 CG42663 FBtr0302645|FBtr0302645|FBtr0302645|FBtr0302644|FBtr0302644|FBtr0302644|FBtr0310576|FBtr0310576|FBtr0310576 12750597|12750597|12750597|12750597|12750597|12750597|12750597|12750597|12750597 12751545|12751545|12751545|12751545|12751545|12751545|12751545|12751545|12751545 2R + 12750651 12750763 3'utr CG42663 FlyBase G15384.1 TATTTAAAGATTTAAAAAGACTAAATTGTGATATATTCAAACAAAACAAAACCGAATCGAGAGTTACAGAAGCATTAAGAGATGATGGCCAGGATGAGCAGGCACGTTTTGTA 394 12750676 0.982193439 16 369 2739 0.936734694 1.36078269 0.026530612 0.198473282 0.357142857 393 12 19 459 2R:12750651-12750763 7 CG42663 FBtr0310576|FBtr0310576|FBtr0310576|FBtr0302644|FBtr0302644|FBtr0302644|FBtr0302645|FBtr0302645|FBtr0302645 12750597|12750597|12750597|12750597|12750597|12750597|12750597|12750597|12750597 12751545|12751545|12751545|12751545|12751545|12751545|12751545|12751545|12751545 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 12750652 12750762 3'utr CG42663 FlyBase G11663.1 ATTTAAAGATTTAAAAAGACTAAATTGTGATATATTCAAACAAAACAAAACCGAATCGAGAGTTACAGAAGCATTAAGAGATGATGGCCAGGATGAGCAGGCACGTTTTGT 290 12750676 0.825928625 16 271 1963 0.935323383 1.53379516 0.017412935 0.3 0.495024876 290 16 10 376 2R:12750652-12750762 7 323 1061 FBgn0261545 747.68 22.44 34.5 0.432002996 14.39393939 9.362318841 1 1 1 0.1 dme-miR-34-5p 8mer-A1 CACTGCCA 2R 12750827 12750834 + 2R_12750827_12750834_+ 0.676923176 0.678100968 0.677512072 0.00083283 CG42663 FBtr0302645|FBtr0302644|FBtr0310576 12750597|12750597|12750597 12751545|12751545|12751545 2R + 12750794 12750848 3'utr CG42663 FlyBase G15385.1 AAATTTTTGGATGATGTTTTACCTTGTAAGCGGCACTGCCAACTGTTCCCCCTAT 10 12750817 0.981057335 8 10 74 1 1.041392685 0 0.1 0.181818182 10 0 0 11 2R:12750794-12750848 8 CG42663 FBtr0310576|FBtr0302644|FBtr0302645 12750597|12750597|12750597 12751545|12751545|12751545 CACTGCCA 8mer-A1 dme-miR-34-5p 2R + 12750814 12750846 3'utr CG42663 FlyBase G11664.1 ACCTTGTAAGCGGCACTGCCAACTGTTCCCCCT 9 12750837 0.761680561 4 7 30 1 1.146128036 0.285714286 0.444444444 0.642857143 9 0 0 14 2R:12750814-12750846 8 6 1062 FBgn0261545 747.68 22.44 34.5 0.008024823 0.267379679 0.173913043 10 -10 0 0.1 dme-miR-7-5p 7mer-m8 GTCTTCC 2R 12751040 12751046 + 2R_12751040_12751046_+ 0.705934213 0.705867113 0.705900663 4.74E-05 CG42663 FBtr0302645|FBtr0302644|FBtr0310576 12750597|12750597|12750597 12751545|12751545|12751545 2R + 12751020 12751092 3'utr CG42663 FlyBase G15386.1 GTAGGTGAACCAAGACTGTAGTCTTCCGCACAAGTCGAGTGTATTCGTAGGACTTGGTTAGAGTTAACCACAT 26 12751038 0.716306019 7 24 131 0.935483871 1.462397998 0.129032258 0.115384615 0.258064516 26 2 0 29 2R:12751020-12751092 7 CG42663 FBtr0310576|FBtr0302644|FBtr0302645 12750597|12750597|12750597 12751545|12751545|12751545 GTCTTCC 7mer-m8 dme-miR-7-5p 2R + 12751009 12751050 3'utr CG42663 FlyBase G11665.1 ATGGTCACGTAGTAGGTGAACCAAGACTGTAGTCTTCCGCAC 14 12751038 0.911693186 4 14 59 1 1.342422681 0.227272727 0.5 0.681818182 14 0 0 22 2R:12751009-12751050 7 16 1063 FBgn0261545 747.68 22.44 34.5 0.021399529 0.713012478 0.463768116 2 2 2 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 12751141 12751148 + 2R_12751141_12751148_+ 0.625364189 0.62536417 0.62536418 0 CG42663 FBtr0302645|FBtr0302644|FBtr0310576 12750597|12750597|12750597 12751545|12751545|12751545 2R + 12751094 12751199 3'utr CG42663 FlyBase G15387.1 AGCTAATCCGGATTAGTGCTCCTCAGACACAACAGCAGTTGAACATTTGCATTTAAGGGTGAAATATTTCAAAGTGTTTACGATGCAGTATATGATGCATATATAT 91 12751140 0.829062939 8 89 684 0.981481481 2.025305865 0.518518519 0.153846154 0.287037037 91 2 0 106 2R:12751094-12751199 8 CG42663 FBtr0310576|FBtr0302644|FBtr0302645 12750597|12750597|12750597 12751545|12751545|12751545 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 12751094 12751203 3'utr CG42663 FlyBase G11667.1 AGCTAATCCGGATTAGTGCTCCTCAGACACAACAGCAGTTGAACATTTGCATTTAAGGGTGAAATATTTCAAAGTGTTTACGATGCAGTATATGATGCATATATATATAT 63 12751140 0.931687536 7 60 479 0.953488372 1.612783857 0.453488372 0.253968254 0.453488372 63 3 1 82 2R:12751094-12751203 8 58 1064 FBgn0261545 747.68 22.44 34.5 0.077573293 2.584670232 1.68115942 1 1 1 0.1 dme-miR-2535b-3p 6mer2-7 CGTGAG 2R 12751453 12751458 + 2R_12751453_12751458_+ 0.999469237 0.999872733 0.999670985 0.000285318 CG42663 FBtr0302645|FBtr0302644|FBtr0310576 12750597|12750597|12750597 12751545|12751545|12751545 2R + 12751225 12751515 3'utr CG42663 FlyBase G15388.1 ATATATATATATGTATACGGTTTCTAAGCGAACATTAGACGACAACCATAACAATAAACTGTACATAGCAGTCGTTCTTAAAGCTAATGATAATGATAATGACAAGCTCTTCTTTAACCGTAGTTAGCTCCTCCGGGCTGCTGCCACCGACTACTTCATTGCAGCAGCCCGTTTCCTAAGCATATATACATACATACTTACACTATATAGAACAGAACGCATTATGATCGTGAGGAGGGAATCTAGACGTAAGCTCGTATGAACATTATAAATGTATTTTCTTAGCGTAGC 67 12751449 0.972085064 27 64 385 0.948051948 1.86332286 0.220779221 0.119402985 0.233766234 67 4 0 73 2R:12751225-12751515 6 CG42663 FBtr0310576|FBtr0302644|FBtr0302645 12750597|12750597|12750597 12751545|12751545|12751545 CGTGAG 6mer2-7 dme-miR-2535b-3p 2R + 12751415 12751518 3'utr CG42663 FlyBase G11669.1 TACATACTTACACTATATAGAACAGAACGCATTATGATCGTGAGGAGGGAATCTAGACGTAAGCTCGTATGAACATTATAAATGTATTTTCTTAGCGTAGCGAG 16 12751449 0.968468152 8 16 94 1 1.301029996 0.4 0.1875 0.35 16 0 0 20 2R:12751415-12751518 6 13 1065 FBgn0261545 747.68 22.44 34.5 0.017387117 0.579322638 0.376811594 4 4 4 0.1 dme-miR-11-3p 7mer-m1 TGTGATG 2R 12849573 12849579 - 2R_12849573_12849579_- 0.535593563 0.535593457 0.53559351 7.07E-08 CG17574 FBtr0306580|FBtr0087816|FBtr0306583|FBtr0344926|FBtr0306579|FBtr0306581|FBtr0337029|FBtr0306582|FBtr0331979 12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356 12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736 2R - 12849552 12849644 3'utr CG17574 FlyBase G22629.2 AACTCCAAACTCCTGGTAAAAAACCAAGTGAAAGCGATCGCACAACGAGCCATTTTTATATTCCATGTGATGTATGTAAAGTGTACATATAAC 35 12849585 0.984357853 14 31 306 0.957446809 1.653212514 0.042553191 0.285714286 0.468085106 35 2 0 45 2R:12849552-12849644 7 CG17574 FBtr0306579|FBtr0344926|FBtr0087816|FBtr0306583|FBtr0306580|FBtr0331979|FBtr0306582|FBtr0337029|FBtr0306581 12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356 12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736 TGTGATG 7mer-m1 dme-miR-11-3p 2R - 12849544 12849622 3'utr CG17574 FlyBase G17161.1 ACCAAGTGAAAGCGATCGCACAACGAGCCATTTTTATATTCCATGTGATGTATGTAAAGTGTACATATAACTTAAGCGC 32 12849585 0.848008398 13 30 251 0.897959184 1.643452676 0 0.34375 0.571428571 32 5 0 44 2R:12849544-12849622 7 25 1066 FBgn0033777 586.8266667 68.93 105.5833333 0.042602018 0.362686784 0.236779795 6 6 6 0.1 dme-miR-184-3p 6mer3-8 TCCGTC 2R 12849703 12849708 - 2R_12849703_12849708_- 0.999997037 0.999995621 0.999996329 9.90E-07 CG17574 FBtr0306580|FBtr0087816|FBtr0306583|FBtr0344926|FBtr0306579|FBtr0306581|FBtr0337029|FBtr0306582|FBtr0331979 12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356 12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736 2R - 12849659 12849758 stop_codon CG17574 FlyBase G22630.1 CAATCCCCACTTTGGCCAGTGAAATCGCACTGTGAACTGAGGATCCCCTTTCCGTCTCGTTATAGCTTTTTTACTCAGCTGAACACTTTACTTTCCATGT 490 12849709 0.794385924 20 483 3738 0.988391376 2.298125005 0.615257048 0.173469388 0.328358209 490 5 2 596 2R:12849659-12849758 6 CG17574 FBtr0306579|FBtr0344926|FBtr0087816|FBtr0306583|FBtr0306580|FBtr0331979|FBtr0306582|FBtr0337029|FBtr0306581 12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356 12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736 TCCGTC 6mer3-8 dme-miR-184-3p 2R - 12849670 12849738 stop_codon CG17574 FlyBase G17162.1 GAAATCGCACTGTGAACTGAGGATCCCCTTTCCGTCTCGTTATAGCTTTTTTACTCAGCTGAACACTTT 340 12849709 0.954244996 10 338 2607 0.996062992 2.704150517 0.572834646 0.376470588 0.582677165 340 2 0 506 2R:12849670-12849738 6 398 1067 FBgn0033777 586.8266667 68.93 105.5833333 0.678224121 5.773973596 3.769534333 1 1 1 0.1 dme-miR-980-5p 7mer-A1 AAAAACA 2R 12870965 12870971 + 2R_12870965_12870971_+ 0.775471618 0.514082524 0.644777071 0.184830005 bic FBtr0087783|FBtr0087782 12870911|12870911 12871240|12871794 2R + 12870956 12870986 3'utr bic FlyBase G15406.1 ACCGAACACAAAAACATACATACAAAACATA 7 12870972 0.850528545 2 5 11 0.714285714 0.698970004 0 0 0 7 2 0 5 2R:12870956-12870986 7 bic FBtr0087783|FBtr0087782 12870911|12870911 12871240|12871794 AAAAACA 7mer-A1 dme-miR-980-5p 2R + 12870955 12871036 3'utr bic FlyBase G11684.1 CACCGAACACAAAAACATACATACAAAACATACGGGGCCAGGGAGCAAGACGAAGTGGCTGGCATACAGGGCAGAACCCACA 12 12870985 0.834062785 4 11 16 0.954545455 1.322219295 0.181818182 0.5 0.727272727 12 1 0 21 2R:12870955-12871036 7 4 1068 FBgn0000181 17984.21667 2221.11 3402.376667 0.000222417 0.001800901 0.001175649 -7 -20 -13.5 0.1 dme-miR-318-3p 7mer-m8 CCCAGTG 2R 12877548 12877554 - 2R_12877548_12877554_- 0.705949892 0.705949565 0.705949728 2.12E-07 Nmda1 FBtr0089878|FBtr0089877|FBtr0309294|FBtr0089875|FBtr0332883|FBtr0089876|FBtr0089873|FBtr0089874|FBtr0309295 12877092|12877092|12877092|12877092|12877092|12877092|12877092|12877092|12877092 12877654|12877654|12877654|12877654|12877654|12877654|12877654|12877654|12877654 2R - 12877420 12877586 3'utr Nmda1 FlyBase G22638.1 ATTGTTGTCGCGTAATCTCATCGGTGTGCTCCCCCAGTGGAGGTAATCTTCAACTAACGAATTACTCAAATACTTACAAATCTATCTACTTCGTGTTGTGTTTGCCCATTTTCCCCGTTTCCTTCTAGTTCTAAATGTCAACTAAGGCTATATGAACTACTTACTTT 42 12877565 0.986632358 23 40 359 0.961538462 1.698970004 0.211538462 0.166666667 0.326923077 42 2 0 50 2R:12877420-12877586 7 Nmda1 FBtr0309295|FBtr0089874|FBtr0089873|FBtr0089876|FBtr0332883|FBtr0089875|FBtr0309294|FBtr0089877|FBtr0089878 12877092|12877092|12877092|12877092|12877092|12877092|12877092|12877092|12877092 12877654|12877654|12877654|12877654|12877654|12877654|12877654|12877654|12877654 CCCAGTG 7mer-m8 dme-miR-318-3p 2R - 12877495 12877595 3'utr Nmda1 FlyBase G17167.1 TACACGAATATTGTTGTCGCGTAATCTCATCGGTGTGCTCCCCCAGTGGAGGTAATCTTCAACTAACGAATTACTCAAATACTTACAAATCTATCTACTTC 23 12877566 0.991751118 8 16 167 0.694444444 0.920818754 0.305555556 0.434782609 0.638888889 23 9 2 25 2R:12877495-12877595 7 10 1069 FBgn0013305 2589.41 187.14 285.2633333 0.003861884 0.05343593 0.035055329 11 12 11.5 0.1 dme-miR-980-3p 6mer2-7 GCAGCT 2R 12877622 12877627 - 2R_12877622_12877627_- 0.653211078 1 0.826605539 0.245216783 Nmda1 FBtr0089878|FBtr0089877|FBtr0309294|FBtr0089875|FBtr0332883|FBtr0089876|FBtr0089873|FBtr0089874|FBtr0309295 12877092|12877092|12877092|12877092|12877092|12877092|12877092|12877092|12877092 12877654|12877654|12877654|12877654|12877654|12877654|12877654|12877654|12877654 2R - 12877596 12877780 stop_codon Nmda1 FlyBase G22639.1 ATGGGCGGCGAGCACAAATACTCTATCAGTCCCGAGGAGTACATCTTTGCGGCACTAAACCTCTACCTGGACATCATCAATATCTTCATGTACATTCTGACTATAATCGGCGCATCGCGCGACTAAGTTCCGCTCTATTTCCAAATATTGTTTGCAGCTTAATCGGGTTATTCAGTAACCTGGAA 63 12877629 0.984001133 19 56 438 0.875 1.544068044 0.0875 0.222222222 0.3875 63 9 1 70 2R:12877596-12877780 6 Nmda1 FBtr0309295|FBtr0089874|FBtr0089873|FBtr0089876|FBtr0332883|FBtr0089875|FBtr0309294|FBtr0089877|FBtr0089878 12877092|12877092|12877092|12877092|12877092|12877092|12877092|12877092|12877092 12877654|12877654|12877654|12877654|12877654|12877654|12877654|12877654|12877654 GCAGCT 6mer2-7 dme-miR-980-3p 2R - 12877597 12877644 3'utr Nmda1 FlyBase G17168.1 ATTTCCAAATATTGTTTGCAGCTTAATCGGGTTATTCAGTAACCTGGA 18 12877630 0.664931472 9 17 172 0.909090909 1.301029996 0 0.166666667 0.318181818 18 2 0 20 2R:12877597-12877644 6 17.5 1070 FBgn0013305 2589.41 187.14 285.2633333 0.006758296 0.093512878 0.061346826 2 3 2.5 0.1 dme-miR-14-3p 7mer-m8 AAGACTG 2R 12883098 12883104 + 2R_12883098_12883104_+ 0.562198408 0.536732228 0.549465318 0.018007323 Aats-asp FBtr0339391|FBtr0087784|FBtr0332882 12882904|12882904|12882904 12883168|12883168|12883168 2R + 12883020 12883117 3'utr Aats-asp FlyBase G15419.1 CCCAATCGTGAGTGTTTTATCCTTCTTCTCAAGACTAACATGCTGCAAAGTTGTTAAACAACGAGAAAAATGTACGGGAAGACTGCCTAGAGTCAAAT 30 12883090 0.936546566 7 27 113 0.942857143 1.217483944 0.114285714 0.133333333 0.257142857 30 1 1 33 2R:12883020-12883117 7 Aats-asp FBtr0332882|FBtr0087784|FBtr0339391 12882904|12882904|12882904 12883168|12883168|12883168 AAGACTG 7mer-m8 dme-miR-14-3p 2R + 12883079 12883121 3'utr Aats-asp FlyBase G11700.1 AACGAGAAAAATGTACGGGAAGACTGCCTAGAGTCAAATTTAT 20 12883107 0.831912073 4 19 62 0.964285714 1.431363764 0.214285714 0.3 0.5 20 1 0 27 2R:12883079-12883121 7 23 1071 FBgn0002069 853.6433333 54.38666667 82.66666667 0.026943337 0.422897769 0.278225806 8 -9 -0.5 0.1 dme-bantam-3p 6mer2-7 GATCTC 2R 12924544 12924549 + 2R_12924544_12924549_+ 0.999999823 0.99999202 0.999995922 5.52E-06 CG13319 FBtr0087788|FBtr0300890 12924346|12924420 12924664|12924664 2R + 12924513 12924642 5'utr CG13319 FlyBase G15454.2 ACTCTACGCACTCCATCAGCTAACTATCTGGGATCTCCGATTCCCGATCTCCGCTCAGACGTCATGCGGCGGCCGAGTGAGCACGAACTTTAAACGTGTATCGGTGATACGAATTTTGTACAATAAATTT 92 12924540 0.980347566 19 76 578 0.844036697 1.264817823 0.100917431 0.152173913 0.28440367 92 13 4 92 2R:12924513-12924642 6 CG13319 FBtr0300890|FBtr0087788 12924420|12924346 12924664|12924664 GATCTC 6mer2-7 dme-bantam-3p 2R + 12924466 12924653 5'utr CG13319 FlyBase G11726.1 CGTCTATTTCGGGGACCGGCGGCTACCCCACGGACGCAGCTTCACGTACTCTACGCACTCCATCAGCTAACTATCTGGGATCTCCGATTCCCGATCTCCGCTCAGACGTCATGCGGCGGCCGAGTGAGCACGAACTTTAAACGTGTATCGGTGATACGAATTTTGTACAATAAATTTATTGCCCTAAG 94 12924540 0.984274652 21 86 571 0.938356164 1.835690571 0.212328767 0.404255319 0.616438356 94 8 1 137 2R:12924466-12924653 6 38 1072 FBgn0033781 91.88 17.2 26.15333333 0.413582934 2.209302326 1.452969666 4 4 4 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 2R 12934259 12934264 - 2R_12934259_12934264_- 0.991707329 0.999999985 0.995853657 0.005863824 CG13322 FBtr0087803|FBtr0087804|FBtr0087805 12934232|12934232|12934232 12934751|12934751|12934751 2R - 12934253 12934289 3'utr CG13322 FlyBase G22666.1 TTACATACTTAACTGTAAGTAGTGGATGTGAATTAAA 7 12934267 0.829755756 3 7 60 1 0.84509804 0 0 0 7 0 0 7 2R:12934253-12934289 6 CG13322 FBtr0087805|FBtr0087804|FBtr0087803 12934232|12934232|12934232 12934751|12934751|12934751 ATGTGA 6mer3-8 dme-miR-1003-3p 2R - 12934246 12934291 3'utr CG13322 FlyBase G17187.1 AATTACATACTTAACTGTAAGTAGTGGATGTGAATTAAATAAAACC 6 12934267 0.98507652 3 5 45 0.857142857 0.77815125 0 0.166666667 0.285714286 6 1 0 6 2R:12934246-12934291 6 6 1073 FBgn0033784 342.93 20 30.73333333 0.017496282 0.3 0.195227766 3 3 3 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 2R 12934398 12934403 - 2R_12934398_12934403_- 0.999651725 0.999618915 0.99963532 2.32E-05 CG13322 FBtr0087803|FBtr0087804|FBtr0087805 12934232|12934232|12934232 12934751|12934751|12934751 2R - 12934376 12934440 3'utr CG13322 FlyBase G22668.1 AGCTCAATCATCGGAAACCACATGTGTATATAACTAATTGACTTGAAGGCGGAGCAGAAGGTAGA 36 12934403 0.973285421 6 35 208 0.977272727 1.33243846 0.272727273 0.222222222 0.363636364 36 0 1 43 2R:12934376-12934440 6 CG13322 FBtr0087805|FBtr0087804|FBtr0087803 12934232|12934232|12934232 12934751|12934751|12934751 TTGACT 6mer3-8 dme-miR-1012-3p 2R - 12934375 12934421 3'utr CG13322 FlyBase G17188.1 ACATGTGTATATAACTAATTGACTTGAAGGCGGAGCAGAAGGTAGAC 25 12934403 0.972303646 4 23 135 0.903225806 1.146128036 0.032258065 0.24 0.387096774 25 2 1 28 2R:12934375-12934421 6 28.5 1074 FBgn0033784 342.93 20 30.73333333 0.08310734 1.425 0.927331887 0 0 0 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2R 12934462 12934467 - 2R_12934462_12934467_- 0.999999999 0.999997858 0.999998928 1.48E-06 CG13322 FBtr0087803|FBtr0087804|FBtr0087805 12934232|12934232|12934232 12934751|12934751|12934751 2R - 12934455 12934507 3'utr CG13322 FlyBase G22669.1 CTGGCCGGAGCAACAACGGACGCATTTGTTTATGTAATTAAAGACTTATCGAC 7 12934459 0.962017095 5 6 33 1 1.041392685 0.090909091 0.428571429 0.636363636 7 0 0 11 2R:12934455-12934507 6 CG13322 FBtr0087805|FBtr0087804|FBtr0087803 12934232|12934232|12934232 12934751|12934751|12934751 AAGACT 6mer3-8 dme-miR-14-3p 2R - 12934445 12934476 3'utr CG13322 FlyBase G17189.1 ATGTAATTAAAGACTTATCGACAAGAATTTTG 11 12934470 0.759583719 6 9 68 0.846153846 0.740362689 0.307692308 0.181818182 0.307692308 11 1 1 11 2R:12934445-12934476 6 7.5 1075 FBgn0033784 342.93 20 30.73333333 0.021870353 0.375 0.244034707 -8 3 -2.5 0.1 dme-miR-184-5p 7mer-A1 GATAAGA 2R 12966173 12966179 - 2R_12966173_12966179_- 0.782911782 0.782911824 0.782911803 0 Psc FBtr0345375 12965995 12966517 2R - 12966143 12966297 3'utr Psc FlyBase G22677.1 ACACAATCCAGCCGAGTTTAGGCTGCCCCCCTTCGGTAGTAGTGAGCCAACGCTCTGTAAATATATAATGATATATACAAATGTCTAGACTTAGGAATTGTATTAAAAATAAACGGAGGATAAGACAGTGATTCAGAATCGATATATATATGCAG 196 12966169 0.942631067 17 189 778 0.959821429 2.33243846 0.107142857 0.117346939 0.227678571 196 9 0 215 2R:12966143-12966297 7 Psc FBtr0345375 12965995 12966517 GATAAGA 7mer-A1 dme-miR-184-5p 2R - 12966130 12966199 3'utr Psc FlyBase G17195.1 TGTATTAAAAATAAACGGAGGATAAGACAGTGATTCAGAATCGATATATATATGCAGTTATACGAATTAT 118 12966169 0.9431917 7 109 429 0.928176796 1.380211242 0.093922652 0.423728814 0.624309392 118 7 6 168 2R:12966130-12966199 7 142 1076 FBgn0005624 501.4 9.713333333 15.04 0.28320702 14.6190803 9.441489362 -10 -10 -10 0.1 dme-miR-980-5p 6mer3-8 GAAAAA 2R 13007184 13007189 + 2R_13007184_13007189_+ 0.654487436 0.772588345 0.71353789 0.083509947 Su(z)2 FBtr0330613|FBtr0300387|FBtr0087793 13005840|13004375|13004375 13007802|13007911|13007802 2R + 13007173 13007273 3'utr Su(z)2 FlyBase G15478.1 TTCGTACACTCGAAAAAGGCTTTAGATTTTCGTACATTTATTCTCAACTTGCTCTTAGCTGATATTTTTTGTTTTGTTATCTTGTATATGGTCTGTACATA 54 13007194 0.75921551 7 52 416 0.954545455 1.322219295 0.151515152 0.166666667 0.318181818 54 1 2 63 2R:13007173-13007273 6 Su(z)2 FBtr0300387|FBtr0087793|FBtr0330613 13004375|13004375|13005840 13007911|13007802|13007802 GAAAAA 6mer3-8 dme-miR-980-5p 2R + 13007163 13007207 3'utr Su(z)2 FlyBase G11740.1 ATTTACGATATTCGTACACTCGAAAAAGGCTTTAGATTTTCGTAC 21 13007194 0.745434764 4 20 121 1 1.462397998 0.275862069 0.333333333 0.517241379 21 0 0 29 2R:13007163-13007207 6 31 1077 FBgn0265623 1008.286667 18.45 28.45666667 0.030745225 1.680216802 1.089375659 -10 -10 -10 0.1 dme-miR-283-5p 7mer-m8 TGATATT 2R 13007658 13007664 + 2R_13007658_13007664_+ 0.57955542 0.620203677 0.599879548 0.028742689 Su(z)2 FBtr0330613|FBtr0300387|FBtr0087793 13005840|13004375|13004375 13007802|13007911|13007802 2R + 13007616 13007689 3'utr Su(z)2 FlyBase G15481.1 TATCTAGTTGTATATGCGAGAAAAGGCTCGACTTATTTAAGCTGATATTGTACTGTTCGGATACCTTAACTAAT 18 13007671 0.985365425 8 17 142 0.95 1.278753601 0.25 0.111111111 0.2 18 1 0 19 2R:13007616-13007689 7 Su(z)2 FBtr0300387|FBtr0087793|FBtr0330613 13004375|13004375|13005840 13007911|13007802|13007802 TGATATT 7mer-m8 dme-miR-283-5p 2R + 13007621 13007681 3'utr Su(z)2 FlyBase G11741.1 AGTTGTATATGCGAGAAAAGGCTCGACTTATTTAAGCTGATATTGTACTGTTCGGATACCT 15 13007671 0.987056171 9 13 112 0.85 0.753327667 0.4 0.266666667 0.45 15 1 2 17 2R:13007621-13007681 7 12.5 1078 FBgn0265623 1008.286667 18.45 28.45666667 0.012397268 0.677506775 0.439264379 -13 -13 -13 0.1 dme-miR-995-5p 7mer-A1 ATTCGGA 2R 13142955 13142961 - 2R_13142955_13142961_- 0.735022802 0.708509183 0.721765992 0.018747946 Ack-like FBtr0330331|FBtr0330329 13142832|13142832 13143125|13143125 2R - 13142908 13143010 3'utr Ack-like FlyBase G22692.2 AGTAATTTGGAACTAACGTAATCACTGCTCGCCATTGGCTCCCTTCTTCATTCGGATCGATAGAATCTCAGCATGTACTTATTCACGCATGCTTGGTCTGCAT 105 13142950 0.847533605 17 99 670 0.953125 1.785329835 0.109375 0.171428571 0.3203125 105 5 1 122 2R:13142908-13143010 7 Ack-like FBtr0330329|FBtr0330331 13142832|13142832 13143125|13143125 ATTCGGA 7mer-A1 dme-miR-995-5p 2R - 13142902 13143029 3'utr Ack-like FlyBase G17208.1 TAAGCATGGGATAGGCTTAAGTAATTTGGAACTAACGTAATCACTGCTCGCCATTGGCTCCCTTCTTCATTCGGATCGATAGAATCTCAGCATGTACTTATTCACGCATGCTTGGTCTGCATGCAAGT 73 13142950 0.837169165 18 70 410 0.975609756 1.77815125 0.138211382 0.452054795 0.674796748 73 2 1 120 2R:13142902-13143029 7 49 1079 FBgn0263998 1708 42.31333333 64.85 0.028688525 1.158027415 0.755589823 -11 -11 -11 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 13163173 13163179 + 2R_13163173_13163179_+ 0.661598972 0.661583833 0.661591402 1.07E-05 Nrk FBtr0087728 13162649 13163484 2R + 13163157 13163195 3'utr Nrk FlyBase G15512.1 ACGTCTCGTATCCATATCTAGTCTGTAGATTAAGTTTAT 27 13163180 0.728612195 6 22 282 0.84375 0.954242509 0.0625 0.111111111 0.25 27 3 2 27 2R:13163157-13163195 7 Nrk FBtr0087728 13162649 13163484 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 13163158 13163193 3'utr Nrk FlyBase G11768.1 CGTCTCGTATCCATATCTAGTCTGTAGATTAAGTTT 14 13163180 0.724604605 5 14 138 1 1.278753601 0.105263158 0.285714286 0.473684211 14 0 0 19 2R:13163158-13163193 7 20.5 1080 FBgn0020391 38.01666667 1.393333333 2.09 0.539237177 14.71291866 9.80861244 -7 -7 -7 0.1 dme-miR-8-3p 6mer3-8 CAGTAT 2R 13170587 13170592 + 2R_13170587_13170592_+ 0.923403687 0.999864367 0.961634027 0.054065879 Spt-I FBtr0087731|FBtr0087729|FBtr0087730 13170480|13170480|13170480 13170744|13170744|13170744 2R + 13170320 13170609 stop_codon Spt-I FlyBase G15517.1 ATTGCTCGTGGAGTGGCTGTGGTACAGGCTGCCTACCTGCAGAACAGGGAACGCCAACCAGTCCGTCCCAGCATTCGCATTGCTGTCAACCGTTTGCTGGAGAGTTCGGAAATAGACAATGCGTTTGAGGTCATCGAGAGTGTTTCCAGCTCCGTCCTATAAGCCTTGTTGTTGGAAAGGAATGATCTTCTTTCGACAATGGCCTTGCTGTTAAGTTTTAAGGCCTGCTGGCCCCATCATTTTTTCATCACTTCTTCACGACCAGTCCAGTATGAATTGTTTAAGTTAAT 179 13170585 0.998902099 33 164 1320 0.917073171 1.672097858 0.263414634 0.134078212 0.243902439 179 14 3 188 2R:13170320-13170609 6 Spt-I FBtr0087730|FBtr0087729|FBtr0087731 13170480|13170480|13170480 13170744|13170744|13170744 CAGTAT 6mer3-8 dme-miR-8-3p 2R + 13170566 13170612 3'utr Spt-I FlyBase G11773.1 ATCACTTCTTCACGACCAGTCCAGTATGAATTGTTTAAGTTAATAGC 20 13170585 0.961890933 4 17 150 0.875 1.447158031 0.0625 0.55 0.71875 20 4 0 28 2R:13170566-13170612 6 24 1081 FBgn0086532 546.6266667 38.03 58.04666667 0.043905652 0.631080726 0.413460434 2 2 2 0.1 dme-miR-995-5p 6mer2-7 ATTCGG 2R 13176977 13176982 - 2R_13176977_13176982_- 0.923792525 0.87468048 0.899236503 0.034727428 CG17724 FBtr0339516|FBtr0310499|FBtr0334468|FBtr0087771|FBtr0344197 13176092|13176092|13176551|13176551|13176551 13177352|13177424|13177424|13177424|13177424 2R - 13176939 13177023 3'utr CG17724 FlyBase G22744.1 AAACACACACACGCGAATGGATTTGAGGCGGAATCAAATGCATTCGGTTCACGGCAAACTTAAGAGCATCGTAAATTAAAATAAT 16 13177001 0.945059237 8 16 67 1 1.255272505 0.111111111 0.125 0.222222222 16 0 0 18 2R:13176939-13177023 6 CG17724 FBtr0087771|FBtr0334468|FBtr0310499|FBtr0339516|FBtr0344197 13176551|13176551|13176092|13176092|13176551 13177424|13177424|13177424|13177352|13177424 ATTCGG 6mer2-7 dme-miR-995-5p 2R - 13176933 13177021 3'utr CG17724 FlyBase G17246.1 ACACACACACGCGAATGGATTTGAGGCGGAATCAAATGCATTCGGTTCACGGCAAACTTAAGAGCATCGTAAATTAAAATAATTTTTAC 12 13177005 0.952605222 8 12 56 1 1.230448921 0 0.416666667 0.588235294 12 0 0 17 2R:13176933-13177021 6 4 1082 FBgn0033802 568.9 19.27666667 29.39333333 0.007031113 0.207504755 0.13608528 19 23 21 0.1 dme-miR-283-5p 8mer-A1 TGATATTA 2R 13177119 13177126 - 2R_13177119_13177126_- 0.592186473 0.592183725 0.592185099 1.98E-06 CG17724 FBtr0339516|FBtr0310499|FBtr0334468|FBtr0087771|FBtr0344197 13176092|13176092|13176551|13176551|13176551 13177352|13177424|13177424|13177424|13177424 2R - 13177089 13177163 3'utr CG17724 FlyBase G22745.2 AGGAATATTAACTCAAACTTAAGCCAAGCTAACTCATTGATATTACCACACTGTTGGATGTGCATACGAAATTTA 96 13177127 0.980161189 8 93 660 0.972222222 1.720159303 0.12962963 0.125 0.222222222 96 2 1 105 2R:13177089-13177163 8 CG17724 FBtr0087771|FBtr0334468|FBtr0310499|FBtr0339516|FBtr0344197 13176551|13176551|13176092|13176092|13176551 13177424|13177424|13177424|13177352|13177424 TGATATTA 8mer-A1 dme-miR-283-5p 2R - 13177095 13177163 3'utr CG17724 FlyBase G17247.1 AGGAATATTAACTCAAACTTAAGCCAAGCTAACTCATTGATATTACCACACTGTTGGATGTGCATACGA 45 13177127 0.979371299 4 44 300 0.984375 1.498310554 0.078125 0.288888889 0.5 45 0 1 63 2R:13177095-13177163 8 65.5 1083 FBgn0033802 568.9 19.27666667 29.39333333 0.11513447 3.397890368 2.228396462 1 1 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 13227735 13227740 + 2R_13227735_13227740_+ 0.563472326 0.968303522 0.765887924 0.286258887 Dp FBtr0333149|FBtr0087740 13227169|13227169 13227745|13227745 2R + 13227698 13227793 3'utr Dp FlyBase G15567.1 TAATGTTATGGGTAATTGTCTCTTAATAATATAATATACCAAAACTGTACACAACCGCAGTGAAATGCAATTATTTTTAGAATGCCACGAGCAGTT 17 13227743 0.963835336 10 17 92 1 1.301029996 0.35 0.176470588 0.3 17 0 0 20 2R:13227698-13227793 6 Dp FBtr0087741 13227169 13228202 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 13227713 13227760 3'utr Dp FlyBase G11809.1 TTGTCTCTTAATAATATAATATACCAAAACTGTACACAACCGCAGTGA 11 13227743 0.911781041 3 11 39 1 1.342422681 0.090909091 0.454545455 0.727272727 11 0 0 22 2R:13227713-13227760 6 9 1084 FBgn0011763 1732.31 84.90333333 129.9733333 0.005195375 0.106002905 0.069244973 -8 -8 -8 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 2R 13231806 13231812 - 2R_13231806_13231812_- 0.381072356 0.390225799 0.385649077 0.006472431 CG4670 FBtr0340493|FBtr0087760 13231756|13231756 13232064|13232064 2R - 13231758 13231903 3'utr CG4670 FlyBase G22787.1 GAACGAACAGTCCTCTTCCAGTTGTAGTCCCTAACCTAATCGCTTTTTACCACGACGATGCACCTGATTGCTTTATTCTTAGGCATGCAAATGTGATTTTTCCCTCCAGAAGTGACAGTTTGAATAAAAACGATCAATGCTAGACG 528 13231804 0.981135199 23 520 3749 0.983508246 2.214843848 0.337331334 0.200757576 0.367316342 528 8 3 656 2R:13231758-13231903 7 CG4670 FBtr0340493|FBtr0087760 13231756|13231756 13232064|13232064 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 13231766 13231862 3'utr CG4670 FlyBase G17284.1 GCTTTTTACCACGACGATGCACCTGATTGCTTTATTCTTAGGCATGCAAATGTGATTTTTCCCTCCAGAAGTGACAGTTTGAATAAAAACGATCAAT 345 13231804 0.989881363 12 341 2476 0.988527725 2.236369288 0.338432122 0.382608696 0.592734226 345 4 2 517 2R:13231766-13231862 7 365.5 1085 FBgn0033814 441.6733333 22.62666667 34.71666667 0.827534679 16.15350619 10.52808449 -8 -8 -8 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 2R 13408076 13408082 - 2R_13408076_13408082_- 0.443131018 0.443131011 0.443131014 0 CG18278 FBtr0087716 13408040 13408169 2R - 13408055 13408134 3'utr CG18278 FlyBase G22804.1 AAAACCAAATTCAAGTCCGCTGGGCGCATATAGATTTCATATTCAGATATCATGTGATTTATGTTGCTATATACATAGTC 31 13408076 0.916453104 13 31 283 1 1.602059991 0.075 0.225806452 0.4 31 0 0 40 2R:13408055-13408134 7 CG18278 FBtr0087716 13408040 13408169 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 13408063 13408097 3'utr CG18278 FlyBase G17296.1 CATATTCAGATATCATGTGATTTATGTTGCTATAT 12 13408076 0.64236075 6 11 115 0.95 1.278753601 0.05 0.5 0.7 12 1 0 19 2R:13408063-13408097 7 18 1086 FBgn0033836 254.63 18.40666667 28.13666667 0.070690806 0.977906556 0.639734629 -6 -6 -6 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 2R 13412803 13412809 - 2R_13412803_13412809_- 0.443130524 0.443129463 0.443129993 7.07E-07 CG30059 FBtr0087715 13412767 13412896 2R - 13412790 13412861 3'utr CG30059 FlyBase G22812.1 AAAACCAAATTCAAGTCCGCTGGGCGCATATAGATTTCATATTCAGATATCATGTGATTTATGTTGCTATAT 29 13412803 0.94115204 9 26 262 0.894736842 1.531478917 0.026315789 0.275862069 0.447368421 29 4 0 34 2R:13412790-13412861 7 CG30059 FBtr0087715 13412767 13412896 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 13412793 13412849 3'utr CG30059 FlyBase G17301.1 AAGTCCGCTGGGCGCATATAGATTTCATATTCAGATATCATGTGATTTATGTTGCTA 18 13412803 0.665547843 6 14 158 0.80952381 0.929418926 0 0.166666667 0.285714286 18 3 1 17 2R:13412793-13412849 7 17.5 1087 FBgn0260475 435.0366667 31.53666667 48.24333333 0.040226494 0.554909629 0.362744421 -6 -6 -6 0.1 dme-bantam-3p 7mer-A1 GATCTCA 2R 13415490 13415496 - 2R_13415490_13415496_- 0.823346962 0.823348331 0.823347646 9.19E-07 CG42321 FBtr0299763|FBtr0299755|FBtr0299757|FBtr0299762|FBtr0299761|FBtr0299754|FBtr0299764|FBtr0306698|FBtr0299758|FBtr0299759 13414976|13414976|13414976|13414976|13414976|13414976|13414976|13414976|13414976|13414976 13415517|13415517|13417569|13415517|13415517|13415517|13417569|13415517|13416931|13417569 2R - 13415482 13415519 stop_codon CG42321 FlyBase G22815.1 AAACCGAAAACGATGGGACTCTGGATCTCACGGTGCAC 13 13415498 0.951568484 4 12 57 0.888888889 1.204119983 0.722222222 0.307692308 0.5 13 2 0 16 2R:13415482-13415519 7 CG42321 FBtr0306698|FBtr0299764|FBtr0299762|FBtr0299761|FBtr0299755|FBtr0299759|FBtr0299754|FBtr0299757|FBtr0299758|FBtr0299763 13414976|13414976|13414976|13414976|13414976|13414976|13414976|13414976|13414976|13414976 13415517|13417569|13415517|13415517|13415517|13417569|13415517|13417569|13416931|13415517 GATCTCA 7mer-A1 dme-bantam-3p 2R - 13415470 13415518 stop_codon CG42321 FlyBase G17304.1 AACCGAAAACGATGGGACTCTGGATCTCACGGTGCACATGTATATAGGA 14 13415498 0.966578041 5 13 69 0.947368421 1.255272505 0.421052632 0.357142857 0.526315789 14 1 0 18 2R:13415470-13415518 7 13.5 1088 FBgn0259221 191.07 4.566666667 6.95 0.070654734 2.95620438 1.942446043 2 2 2 0.1 dme-miR-7-5p 6mer2-7 TCTTCC 2R 13417546 13417551 - 2R_13417546_13417551_- 1 0.999968616 0.999984308 2.22E-05 CG42321 FBtr0299757|FBtr0299764|FBtr0299759 13414976|13414976|13414976 13417569|13417569|13417569 2R - 13417529 13417580 stop_codon CG42321 FlyBase G22817.1 TGCACATGTGAGGATGTGGACGATGGACTTCTTCCCTCATCGAAGGCAAATC 26 13417557 0.865026351 3 25 171 0.933333333 1.447158031 0.533333333 0.153846154 0.266666667 26 2 0 28 2R:13417529-13417580 6 CG42321 FBtr0299764|FBtr0299759|FBtr0299757 13414976|13414976|13414976 13417569|13417569|13417569 TCTTCC 6mer2-7 dme-miR-7-5p 2R - 13417530 13417574 stop_codon CG42321 FlyBase G17306.1 TGTGAGGATGTGGACGATGGACTTCTTCCCTCATCGAAGGCAAAT 17 13417557 0.922485591 2 17 116 1 1.380211242 0.666666667 0.294117647 0.5 17 0 0 24 2R:13417530-13417574 6 21 1089 FBgn0259221 191.07 4.566666667 6.95 0.109907364 4.598540146 3.021582734 6 6 6 0.1 dme-miR-317-3p 6mer2-7 GTGTTC 2R 13418341 13418346 - 2R_13418341_13418346_- 0.946285887 0.895995636 0.921140761 0.035560612 CG42321 FBtr0303100|FBtr0299756|FBtr0299760|FBtr0299765 13418077|13418077|13418077|13418077 13418982|13418982|13418982|13418982 2R - 13418335 13418387 3'utr CG42321 FlyBase G22820.1 AAACACTATTTTTTCTTGTCATTTGTTATATCCACCCACAAGTGTTCTTTCAT 15 13418339 0.755928961 4 14 142 0.933333333 1.146128036 0 0 0 15 1 0 14 2R:13418335-13418387 6 CG42321 FBtr0303100|FBtr0299756|FBtr0299765|FBtr0299760 13418077|13418077|13418077|13418077 13418982|13418982|13418982|13418982 GTGTTC 6mer2-7 dme-miR-317-3p 2R - 13418335 13418383 3'utr CG42321 FlyBase G17309.1 ACTATTTTTTCTTGTCATTTGTTATATCCACCCACAAGTGTTCTTTCAT 8 13418340 0.992283836 2 8 88 1 1 0 0.25 0.4 8 0 0 10 2R:13418335-13418383 6 8.5 1090 FBgn0259221 191.07 4.566666667 6.95 0.044486314 1.861313869 1.223021583 -7 -6 -6.5 0.1 dme-miR-317-3p 6mer2-7 GTGTTC 2R 1343931 1343936 - 2R_1343931_1343936_- 0.983705787 0.999979145 0.991842466 0.011506961 Yeti FBtr0344755 1343401 1344290 2R - 1343911 1343959 3'utr Yeti FlyBase G19234.1 AAAAGACGACGCCACCGATAATAGTGTTCGTTTTGTGATTAGATTTGCT 17 1343938 0.989078419 6 17 163 1 1.255272505 0.111111111 0.058823529 0.111111111 17 0 0 18 2R:1343911-1343959 6 Yeti FBtr0344755 1343401 1344290 GTGTTC 6mer2-7 dme-miR-317-3p 2R - 1343925 1343958 3'utr Yeti FlyBase G14622.1 AAAGACGACGCCACCGATAATAGTGTTCGTTTTG 10 1343938 0.982753503 2 9 70 0.952380952 1.301029996 0.238095238 0.6 0.80952381 10 1 0 20 2R:1343925-1343958 6 13.5 1091 FBgn0267398 2383.886667 322.18 496.1 0.005663021 0.041902042 0.027212256 2 2 2 0.1 dme-miR-14-3p 7mer-m8 AAGACTG 2R 13439843 13439849 - 2R_13439843_13439849_- 0.671794611 0.671793612 0.671794111 7.07E-07 cnn FBtr0309891|FBtr0309889|FBtr0100656|FBtr0309893|FBtr0309892|FBtr0087703|FBtr0100654|FBtr0087704 13439312|13439312|13439312|13439312|13439312|13439312|13439312|13439312 13440071|13440071|13440071|13440071|13440071|13440071|13440071|13440071 2R - 13439815 13439867 3'utr cnn FlyBase G22833.1 ATACCCATGCATTTTCTAAAGACTGTTGAGGGAATCGAACCCATTGAATGAAC 72 13439842 0.769312979 8 69 532 0.9625 1.886490725 0.0375 0.111111111 0.2 72 3 0 77 2R:13439815-13439867 7 cnn FBtr0100654|FBtr0087704|FBtr0309892|FBtr0087703|FBtr0100656|FBtr0309893|FBtr0309891|FBtr0309889 13439312|13439312|13439312|13439312|13439312|13439312|13439312|13439312 13440071|13440071|13440071|13440071|13440071|13440071|13440071|13440071 AAGACTG 7mer-m8 dme-miR-14-3p 2R - 13439765 13439869 3'utr cnn FlyBase G17320.1 AAATACCCATGCATTTTCTAAAGACTGTTGAGGGAATCGAACCCATTGAATGAACTATCACACACACACACACACACACCTGTTTTAAGCACAAAACGAAACTAA 64 13439842 0.980833802 8 61 433 0.958333333 1.662757832 0.072916667 0.390625 0.59375 64 3 1 92 2R:13439765-13439869 7 60 1092 FBgn0013765 2282.81 64.11 98.51 0.026283396 0.935891437 0.609075221 -7 -7 -7 0.1 dme-miR-8-3p 6mer3-8 CAGTAT 2R 13440050 13440055 - 2R_13440050_13440055_- 0.996119981 0.999671806 0.997895893 0.002511502 cnn FBtr0309891|FBtr0309889|FBtr0100656|FBtr0309893|FBtr0309892|FBtr0087703|FBtr0100654|FBtr0087704 13439312|13439312|13439312|13439312|13439312|13439312|13439312|13439312 13440071|13440071|13440071|13440071|13440071|13440071|13440071|13440071 2R - 13439982 13440129 stop_codon cnn FlyBase G22834.1 ACTAAAAACGCACAATGTGCTGCGAAACGTTCGCTCAAACATGGAGAATGAGTTATAACGATCGCGCCGACGTCCAGTATATCAGCATTAACCCGAGAGGCCATTCACCCAATGTTCAATTGCCATTTCTTGCCATTCTTATATTTTG 65 13440048 0.973510686 14 62 382 0.948051948 1.86332286 0.155844156 0.153846154 0.285714286 65 4 0 73 2R:13439982-13440129 6 cnn FBtr0100654|FBtr0087704|FBtr0309892|FBtr0087703|FBtr0100656|FBtr0309893|FBtr0309891|FBtr0309889 13439312|13439312|13439312|13439312|13439312|13439312|13439312|13439312 13440071|13440071|13440071|13440071|13440071|13440071|13440071|13440071 CAGTAT 6mer3-8 dme-miR-8-3p 2R - 13439966 13440084 stop_codon cnn FlyBase G17321.1 GAATGAGTTATAACGATCGCGCCGACGTCCAGTATATCAGCATTAACCCGAGAGGCCATTCACCCAATGTTCAATTGCCATTTCTTGCCATTCTTATATTTTGTATGCATTGTATTTTG 39 13440048 0.97690422 9 38 254 0.981818182 1.73239376 0.236363636 0.384615385 0.563636364 39 1 0 54 2R:13439966-13440084 6 35.5 1093 FBgn0013765 2282.81 64.11 98.51 0.01555101 0.553735767 0.360369506 -7 -7 -7 0.1 dme-miR-7-5p 6mer3-8 GTCTTC 2R 13453888 13453893 - 2R_13453888_13453893_- 0.516846564 0.999999265 0.758422915 0.341640551 arr FBtr0087702 13453638 13454435 2R - 13453874 13453929 3'utr arr FlyBase G22845.1 TGAAGCAATATTGACGAATATGCGACTAATTGAACTGTCTTCTTAATTGTTATAAA 8 13453910 0.974292148 5 7 50 1 0.954242509 0.444444444 0.125 0.222222222 8 0 0 9 2R:13453874-13453929 6 arr FBtr0087702 13453638 13454435 GTCTTC 6mer3-8 dme-miR-7-5p 2R - 13453843 13453920 3'utr arr FlyBase G17329.1 ATTGACGAATATGCGACTAATTGAACTGTCTTCTTAATTGTTATAAACACCAAAAAGTGCCTCATTAATACGTGTGTT 10 13453900 0.980594262 8 10 74 1 1.113943352 0.153846154 0.3 0.461538462 10 0 0 13 2R:13453843-13453920 6 4 1094 FBgn0000119 295 5.866666667 8.943333333 0.013559322 0.681818182 0.447260529 17 7 12 0.1 dme-miR-14-3p 6mer2-7 AGACTG 2R 13454139 13454144 - 2R_13454139_13454144_- 0.999973031 0.999956278 0.999964654 1.18E-05 arr FBtr0087702 13453638 13454435 2R - 13454039 13454302 3'utr arr FlyBase G22846.1 GAGTTTAATTGGTCATTTAAGGCTTTAACTAATTTTAATCATAGCTTAGAGAGAGCGTCCATGCCTGAAGGACTTATTCGATCTCGTTAAGTTTCATTTTGCCAGATAGCCCGAAATAGATTGCAGTACAATGCTTTGCAGCTACCATACGCAACAATAGACTGCAGATTATTAGCAATTACCTTAGGTATAAATGATGTAATATTCGATAGGTGAGACAGTCTTTTGAAATTCCGTGTGCCAAATTTTCCGAAACCTGACAGA 285 13454145 0.971995387 36 268 1709 0.9375 1.896250562 0.113095238 0.150877193 0.279761905 285 18 3 315 2R:13454039-13454302 6 arr FBtr0087702 13453638 13454435 AGACTG 6mer2-7 dme-miR-14-3p 2R - 13454118 13454316 3'utr arr FlyBase G17330.1 GTAAATATGTATGTGAGTTTAATTGGTCATTTAAGGCTTTAACTAATTTTAATCATAGCTTAGAGAGAGCGTCCATGCCTGAAGGACTTATTCGATCTCGTTAAGTTTCATTTTGCCAGATAGCCCGAAATAGATTGCAGTACAATGCTTTGCAGCTACCATACGCAACAATAGACTGCAGATTATTAGCAATTACCTT 178 13454145 0.973304798 24 166 1008 0.95 1.693726949 0.153846154 0.342696629 0.55 178 9 4 247 2R:13454118-13454316 6 79 1095 FBgn0000119 295 5.866666667 8.943333333 0.26779661 13.46590909 8.833395453 1 1 1 0.1 dme-bantam-3p 6mer2-7 GATCTC 2R 13454218 13454223 - 2R_13454218_13454223_- 0.57423464 0.930485133 0.752359887 0.251907144 arr FBtr0087702 13453638 13454435 2R - 13454039 13454302 3'utr arr FlyBase G22846.1 GAGTTTAATTGGTCATTTAAGGCTTTAACTAATTTTAATCATAGCTTAGAGAGAGCGTCCATGCCTGAAGGACTTATTCGATCTCGTTAAGTTTCATTTTGCCAGATAGCCCGAAATAGATTGCAGTACAATGCTTTGCAGCTACCATACGCAACAATAGACTGCAGATTATTAGCAATTACCTTAGGTATAAATGATGTAATATTCGATAGGTGAGACAGTCTTTTGAAATTCCGTGTGCCAAATTTTCCGAAACCTGACAGA 285 13454226 0.971995387 36 268 1709 0.9375 1.896250562 0.113095238 0.150877193 0.279761905 285 18 3 315 2R:13454039-13454302 6 arr FBtr0087702 13453638 13454435 GATCTC 6mer2-7 dme-bantam-3p 2R - 13454118 13454316 3'utr arr FlyBase G17330.1 GTAAATATGTATGTGAGTTTAATTGGTCATTTAAGGCTTTAACTAATTTTAATCATAGCTTAGAGAGAGCGTCCATGCCTGAAGGACTTATTCGATCTCGTTAAGTTTCATTTTGCCAGATAGCCCGAAATAGATTGCAGTACAATGCTTTGCAGCTACCATACGCAACAATAGACTGCAGATTATTAGCAATTACCTT 178 13454226 0.973304798 24 166 1008 0.95 1.693726949 0.153846154 0.342696629 0.55 178 9 4 247 2R:13454118-13454316 6 74 1096 FBgn0000119 295 5.866666667 8.943333333 0.250847458 12.61363636 8.274319791 3 3 3 0.1 dme-miR-12-5p 6mer2-7 ATACTC 2R 13487501 13487506 - 2R_13487501_13487506_- 1 0.999990014 0.999995007 7.07E-06 bbc FBtr0087700|FBtr0332928|FBtr0305993|FBtr0087699 13487180|13487180|13486632|13486632 13487567|13487567|13487567|13487567 2R - 13487408 13487539 3'utr bbc FlyBase G22864.1 AATTTTACAAATTTACGTCGTTAGAACCGAGGGATACTCGTAGAAGCAGGCGAAGTGGGAGCGCAATTAATACAAACCAAACCCAACAAAATTCACCGTCGATGTTTTGGCTAAATAAACATAACCAAAACC 31 13487505 0.96222896 13 28 139 0.916666667 1.51851394 0.138888889 0.161290323 0.277777778 31 3 0 33 2R:13487408-13487539 6 bbc FBtr0305993|FBtr0087699|FBtr0087700|FBtr0332928 13486632|13486632|13487180|13487180 13487567|13487567|13487567|13487567 ATACTC 6mer2-7 dme-miR-12-5p 2R - 13487487 13487584 stop_codon bbc FlyBase G17342.1 AGAGCAAACCGCACTAGGCTCCGGTTATGCGCTACATTAATTAGTAATTTTACAAATTTACGTCGTTAGAACCGAGGGATACTCGTAGAAGCAGGCGA 23 13487521 0.955617325 10 22 110 0.973684211 1.568201724 0.131578947 0.434782609 0.657894737 23 1 0 37 2R:13487487-13487584 6 16 1097 FBgn0033844 1978.716667 102.1933333 155.1166667 0.008086049 0.156565986 0.103148168 -1 15 7 0.1 dme-miR-283-5p 7mer-A1 GATATTA 2R 13495322 13495328 - 2R_13495322_13495328_- 0.781398184 0.781653703 0.781525943 0.000180666 drk FBtr0087696|FBtr0087697|FBtr0087698 13495220|13495220|13495220 13496977|13496977|13496977 2R - 13495316 13495355 3'utr drk FlyBase G22881.1 AATAAAGCAGGCAATTGACAAGGTTTAGATATTAACTAAC 38 13495331 0.937114394 3 38 233 1 1.662757832 0.130434783 0.131578947 0.282608696 38 0 0 46 2R:13495316-13495355 7 drk FBtr0087698|FBtr0087696|FBtr0087697 13495220|13495220|13495220 13496977|13496977|13496977 GATATTA 7mer-A1 dme-miR-283-5p 2R - 13495316 13495352 3'utr drk FlyBase G17359.1 AAAGCAGGCAATTGACAAGGTTTAGATATTAACTAAC 31 13495331 0.703441228 2 31 151 1 1.633468456 0.069767442 0.35483871 0.534883721 31 0 0 43 2R:13495316-13495352 7 34.5 1098 FBgn0004638 2373.316667 149.8733333 229.7333333 0.014536619 0.230194386 0.150174115 3 3 3 0.1 dme-miR-980-3p 6mer3-8 GGCAGC 2R 13496891 13496896 - 2R_13496891_13496896_- 1 1 1 0 drk FBtr0087695|FBtr0087696|FBtr0087697|FBtr0087694|FBtr0087698 13496439|13495220|13495220|13496764|13495220 13496977|13496977|13496977|13496977|13496977 2R - 13496866 13496923 3'utr drk FlyBase G22889.1 AAACACAACACACACCCATAACGATTAGGCAGCATTATCAGCAATTGCGAATAACAAC 40 13496898 0.946402215 7 38 166 0.955555556 1.633468456 0.022222222 0.1 0.2 40 2 0 43 2R:13496866-13496923 6 drk FBtr0087694|FBtr0087698|FBtr0087696|FBtr0087697|FBtr0087695 13496764|13495220|13495220|13495220|13496439 13496977|13496977|13496977|13496977|13496977 GGCAGC 6mer3-8 dme-miR-980-3p 2R - 13496868 13496919 3'utr drk FlyBase G17366.1 ACAACACACACCCATAACGATTAGGCAGCATTATCAGCAATTGCGAATAACA 27 13496898 0.941129823 6 27 127 1 1.662757832 0.065217391 0.555555556 0.739130435 27 0 0 46 2R:13496868-13496919 6 29.5 1099 FBgn0004638 2373.316667 149.8733333 229.7333333 0.012429863 0.196832881 0.12840975 2 2 2 0.1 dme-miR-92b-3p 8mer-m1 GTGCAATT 2R 13537672 13537679 - 2R_13537672_13537679_- 0.596698356 0.595742429 0.596220392 0.000675994 CG6145 FBtr0087685|FBtr0087687|FBtr0300193|FBtr0300192|FBtr0087686 13537369|13537369|13537369|13537369|13537369 13537761|13537761|13537761|13537761|13537761 2R - 13537649 13537815 stop_codon CG6145 FlyBase G22898.1 GGGTCGGAGGACACGCTCGATGACTTTGACAATCTTCAGATCTACGATGCGTAATGGCAGCCAAACCCAATCACTGTTTGTTAGCGTGGCCAATTAGACTAGTTGTAGTCGTAGTTTTTAGGGCTTGTGTGCTAGTGTGCAATTTGGTAGGCTTAATTATGTAGGAA 29 13537680 0.993499608 12 29 190 1 1.602059991 0.4 0.379310345 0.55 29 0 0 40 2R:13537649-13537815 8 CG6145 FBtr0087686|FBtr0300193|FBtr0300192|FBtr0087685|FBtr0087687 13537369|13537369|13537369|13537369|13537369 13537761|13537761|13537761|13537761|13537761 GTGCAATT 8mer-m1 dme-miR-92b-3p 2R - 13537658 13537723 3'utr CG6145 FlyBase G17375.1 ATTAGACTAGTTGTAGTCGTAGTTTTTAGGGCTTGTGTGCTAGTGTGCAATTTGGTAGGCTTAATT 9 13537689 0.981214508 6 9 74 1 1.113943352 0.230769231 0.444444444 0.615384615 9 0 0 13 2R:13537658-13537723 8 8.5 1100 FBgn0033853 288.29 16.11333333 24.75 0.0294842 0.527513446 0.343434343 1 10 5.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 13555501 13555506 + 2R_13555501_13555506_+ 0.999989862 0.999996415 0.999993138 4.60E-06 Roe1 FBtr0087675|FBtr0087675|FBtr0087675 13555286|13555286|13555286 13555606|13555606|13555606 2R + 13555473 13555526 3'utr Roe1 FlyBase G15633.1 TTAGAATTCCTCCTAGTTTCTAAGAGATCTGTGACTGGATTTGATGGCCACAAT 370 13555502 0.792228521 11 348 3113 0.950236967 1.700054386 0.05450237 0.127027027 0.234597156 370 14 7 401 2R:13555473-13555526 6 Roe1 FBtr0087675|FBtr0087675|FBtr0087675 13555286|13555286|13555286 13555606|13555606|13555606 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 13555441 13555573 3'utr Roe1 FlyBase G11858.1 ACAAACGCATCCTTCGGGCAAAGCTTGCGAATTTAGAATTCCTCCTAGTTTCTAAGAGATCTGTGACTGGATTTGATGGCCACAATTTGTACCATACGCGTGGCCATCGAGTGTTCCACTTTAAGGTTTAATT 228 13555502 0.804102875 19 214 1796 0.943786982 2.202760687 0.062130178 0.355263158 0.565088757 228 18 1 319 2R:13555441-13555573 6 285.5 1101 FBgn0014877 286 33.49333333 51.28666667 0.998251748 8.524084395 5.566748993 -1 -1 -1 0.1 dme-miR-317-5p 7mer-A1 TATCCCA 2R 13580425 13580431 - 2R_13580425_13580431_- 0.823349499 0.823348595 0.823349047 6.36E-07 CG6191 FBtr0330617 13580311 13580990 2R - 13580388 13580433 3'utr CG6191 FlyBase G22913.1 TATATCCCAAAATTACCTTCGTCCCTGATTCCTAGACTCCTAAGTG 23 13580408 0.666205762 6 23 187 1 1.414973348 0 0.130434783 0.230769231 23 0 0 26 2R:13580388-13580433 7 CG6191 FBtr0330617 13580311 13580990 TATCCCA 7mer-A1 dme-miR-317-5p 2R - 13580388 13580436 3'utr CG6191 FlyBase G17389.1 GAGTATATCCCAAAATTACCTTCGTCCCTGATTCCTAGACTCCTAAGTG 14 13580408 0.668228211 4 13 115 0.904761905 1.278753601 0.047619048 0.357142857 0.571428571 14 2 0 19 2R:13580388-13580436 7 10.5 1102 FBgn0027581 566.66 18.94333333 29.07333333 0.01852963 0.554284709 0.361155698 -23 -23 -23 0.1 dme-miR-252-5p 7mer-m8 GTACTTA 2R 13580891 13580897 - 2R_13580891_13580897_- 0.588299908 0.588299844 0.588299876 7.07E-08 CG6191 FBtr0330617|FBtr0087678 13580311|13580584 13580990|13580990 2R - 13580885 13580924 stop_codon CG6191 FlyBase G22914.2 CGCAAGGGCAGTCGCAAGTAGGCGTTCGTACTTATAGCAT 34 13580900 0.775550217 7 24 205 0.789473684 1.176091259 0.210526316 0.117647059 0.210526316 34 7 1 30 2R:13580885-13580924 7 CG6191 FBtr0330617|FBtr0087678 13580311|13580584 13580990|13580990 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 13580868 13580922 stop_codon CG6191 FlyBase G17390.1 CAAGGGCAGTCGCAAGTAGGCGTTCGTACTTATAGCATACTTTCGGGTGTTGGGT 13 13580900 0.985075084 3 11 91 0.8 1.204119983 0 0.461538462 0.65 13 4 0 16 2R:13580868-13580922 7 22.5 1103 FBgn0027581 566.66 18.94333333 29.07333333 0.039706349 1.187752947 0.773905068 3 3 3 0.1 dme-miR-932-5p 7mer-A1 GAATTGA 2R 13820064 13820070 - 2R_13820064_13820070_- 0.727832121 0.819576036 0.773704078 0.064872734 fl(2)d FBtr0304697|FBtr0304696|FBtr0087647|FBtr0087648 13819622|13819622|13819622|13819622 13820154|13820154|13820154|13820154 2R - 13820002 13820184 stop_codon fl(2)d FlyBase G22925.1 GGCAGCGGAGCAGTCGACTACTCCACCTAAGCGCTGGCGAACCTTTTTCCAAAAAAGGGTGCACTCCATATGAGTTCGTCAAATTGATCGTTAATTCCTGACGTTTACTTTTGTGAATTGAGATTTCAAAACAGAGAGAGACTTCATTTTATATTTCTAACCTATCTTTTAGATTCTTTAATT 65 13820067 0.982831166 25 62 470 0.95 1.579783597 0.325 0.215384615 0.3625 65 3 1 76 2R:13820002-13820184 7 fl(2)d FBtr0087647|FBtr0087648|FBtr0304697|FBtr0304696 13819622|13819622|13819622|13819622 13820154|13820154|13820154|13820154 GAATTGA 7mer-A1 dme-miR-932-5p 2R - 13820010 13820174 stop_codon fl(2)d FlyBase G17396.1 CAGTCGACTACTCCACCTAAGCGCTGGCGAACCTTTTTCCAAAAAAGGGTGCACTCCATATGAGTTCGTCAAATTGATCGTTAATTCCTGACGTTTACTTTTGTGAATTGAGATTTCAAAACAGAGAGAGACTTCATTTTATATTTCTAACCTATCTTTTAGATT 58 13820067 0.986484706 21 56 478 0.97826087 1.954242509 0.239130435 0.448275862 0.652173913 58 2 0 90 2R:13820010-13820174 7 29 1104 FBgn0000662 1153.03 55.06666667 84.32666667 0.025151124 0.526634383 0.343900704 -3 -3 -3 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 2R 13825535 13825541 + 2R_13825535_13825541_+ 0.782890235 0.782911823 0.782901029 1.53E-05 CG13339 FBtr0087632 13825430 13825572 2R + 13825511 13825549 3'utr CG13339 FlyBase G15651.1 TAAATATCTAATATTAGGGCTGTTGTACAAATATGTAAA 13 13825533 0.695330293 6 13 100 1 1.146128036 0.5 0.076923077 0.142857143 13 0 0 14 2R:13825511-13825549 7 CG13339 FBtr0087632 13825430 13825572 GTACAAA 7mer-A1 dme-miR-305-5p 2R + 13825516 13825550 3'utr CG13339 FlyBase G11870.1 ATCTAATATTAGGGCTGTTGTACAAATATGTAAAT 15 13825533 0.622546621 6 15 98 1 1.462397998 0.724137931 0.6 0.793103448 15 0 0 29 2R:13825516-13825550 7 14 1105 FBgn0033871 109.33 21.32666667 32.49 0.128052685 0.656455142 0.430901816 2 2 2 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 13863458 13863463 + 2R_13863458_13863463_+ 0.903718963 0.664167776 0.78394337 0.169388278 CG13344 FBtr0087586|FBtr0087586|FBtr0087586|FBtr0339953|FBtr0339953|FBtr0339953 13863344|13863344|13863344|13863344|13863344|13863344 13864156|13864156|13864156|13863579|13863579|13863579 2R + 13863433 13863491 3'utr CG13344 FlyBase G15662.1 AGGTTTAGTTTTATGAGGCGCACTTCTGTGACTTTGTTTGTGTTCGTACGTTCGTATAT 54 13863467 0.814667431 10 53 463 0.984375 1.799340549 0.3125 0.166666667 0.296875 54 1 0 63 2R:13863433-13863491 6 CG13344 FBtr0339953|FBtr0339953|FBtr0339953|FBtr0087586|FBtr0087586|FBtr0087586 13863344|13863344|13863344|13863344|13863344|13863344 13863579|13863579|13863579|13864156|13864156|13864156 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 13863439 13863489 3'utr CG13344 FlyBase G11878.1 AGTTTTATGAGGCGCACTTCTGTGACTTTGTTTGTGTTCGTACGTTCGTAT 37 13863467 0.615195605 9 33 319 0.886792453 1.194976603 0.339622642 0.378378378 0.566037736 37 4 2 47 2R:13863439-13863489 6 39.5 1106 FBgn0033884 128.6733333 8.203333333 12.55333333 0.306978913 4.815115807 3.146574615 -9 -9 -9 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2R 13863610 13863615 + 2R_13863610_13863615_+ 0.999435409 0.975344097 0.987389753 0.017035122 CG13344 FBtr0087586 13863344 13864156 2R + 13863574 13863650 3'utr CG13344 FlyBase G15663.1 TACCTTAACTATAATGATATTTATAATAATTTACAAAAGACTTGCGGCATCATGCCAAGCCGATATTATTAGGGCCT 13 13863604 0.974646381 7 11 79 0.875 1.146128036 0 0.230769231 0.375 13 2 0 14 2R:13863574-13863650 6 CG13344 FBtr0087586 13863344 13864156 AAGACT 6mer3-8 dme-miR-14-3p 2R + 13863508 13863630 3'utr CG13344 FlyBase G11879.1 ATGTTTAGTTAGCTTTAGCGAGCCGTGTTAGCTAATTTGGACTATATTAATGATGATATTTAGTTGTACCTTAACTATAATGATATTTATAATAATTTACAAAAGACTTGCGGCATCATGCCA 39 13863603 0.982498635 13 35 270 0.935483871 1.763427994 0.032258065 0.435897436 0.64516129 39 4 0 58 2R:13863508-13863630 6 14.5 1107 FBgn0033884 128.6733333 8.203333333 12.55333333 0.112688462 1.767574157 1.155071694 6 7 6.5 0.1 dme-miR-980-3p 6mer3-8 GGCAGC 2R 13863699 13863704 + 2R_13863699_13863704_+ 0.999918343 0.999925398 0.99992187 5.02E-06 CG13344 FBtr0087586 13863344 13864156 2R + 13863682 13863716 3'utr CG13344 FlyBase G15664.1 ATTTAGGAGCACCAACTGGCAGCGCTGGCGTTGAC 10 13863698 0.947115154 2 10 21 1 1.041392685 0.363636364 0.1 0.181818182 10 0 0 11 2R:13863682-13863716 6 CG13344 FBtr0087586 13863344 13864156 GGCAGC 6mer3-8 dme-miR-980-3p 2R + 13863667 13863716 3'utr CG13344 FlyBase G11880.1 AGAGCAGCAGCATGTATTTAGGAGCACCAACTGGCAGCGCTGGCGTTGAC 7 13863698 0.999181601 2 6 22 1 1.041392685 0.363636364 0.571428571 0.727272727 7 0 0 11 2R:13863667-13863716 6 8 1108 FBgn0033884 128.6733333 8.203333333 12.55333333 0.062172944 0.975213328 0.637280935 1 1 1 0.1 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2R 13863903 13863910 + 2R_13863903_13863910_+ 0.631124852 0.631127821 0.631126336 2.05E-06 CG13344 FBtr0087586 13863344 13864156 2R + 13863815 13863940 3'utr CG13344 FlyBase G15665.1 AACCCCCTCTGGCAGCCCATAGCACAAAGAAACGTATGAACCCAGCTTGTACTTGAGTTAGTTGGATGATTAAAGTTGAAGCGGCATTTCTAGTCAGTAAATGGTGGTCAGAATAGAGGGAACGTA 137 13863902 0.977503484 11 134 886 0.9625 2.187520721 0.0875 0.145985401 0.26875 137 6 0 154 2R:13863815-13863940 8 CG13344 FBtr0087586 13863344 13864156 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R + 13863886 13863980 3'utr CG13344 FlyBase G11881.1 AAAGTTGAAGCGGCATTTCTAGTCAGTAAATGGTGGTCAGAATAGAGGGAACGTAGAAGGAGGAGGAGGAGGAGGAGTAACCCCGATACAGGGCA 70 13863902 0.972006182 8 66 393 0.97 1.685741739 0.2 0.371428571 0.56 70 2 1 97 2R:13863886-13863980 8 97 1109 FBgn0033884 128.6733333 8.203333333 12.55333333 0.753846951 11.8244616 7.727031333 1 1 1 0.1 dme-bantam-3p 6mer3-8 TGATCT 2R 13943680 13943685 - 2R_13943680_13943685_- 0.9821806 0.983153912 0.982667256 0.000688227 AGO1 FBtr0305592 13943385 13947971 2R - 13943618 13943697 3'utr AGO1 FlyBase G23018.1 AATGAAAGTTGATGATCTTTTCGATATAATTCTGTCAAGCTGTCTTAACAATTAGTTATAAGCGCTTCAATACAAGAAAC 20 13943678 0.855237785 8 20 165 1 1.414973348 0.115384615 0.15 0.346153846 20 0 0 26 2R:13943618-13943697 6 AGO1 FBtr0305592 13943385 13947971 TGATCT 6mer3-8 dme-bantam-3p 2R - 13943619 13943727 3'utr AGO1 FlyBase G17447.1 CAAAATGCGAGTTTGTGAAATATGCAATTTAATGAAAGTTGATGATCTTTTCGATATAATTCTGTCAAGCTGTCTTAACAATTAGTTATAAGCGCTTCAATACAAGAAA 16 13943679 0.985238221 7 14 124 0.923076923 1.380211242 0.192307692 0.3125 0.576923077 16 2 0 24 2R:13943619-13943727 6 10.5 1110 FBgn0262739 6339.806667 111.4333333 171.8633333 0.001656202 0.094226742 0.061095056 -7 -6 -6.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 2R 13943883 13943888 - 2R_13943883_13943888_- 1 0.999999998 0.999999999 0 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 2R - 13943866 13943930 3'utr AGO1 FlyBase G23020.1 AAGCAACGTGAGCAACGTAATATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGT 37 13943890 0.86445956 12 34 389 0.886363636 1.591064607 0.159090909 0.162162162 0.295454545 37 5 0 39 2R:13943866-13943930 6 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 TGATCT 6mer3-8 dme-bantam-3p 2R - 13943864 13943921 3'utr AGO1 FlyBase G17448.1 GAGCAACGTAATATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTAA 27 13943890 0.987717694 10 26 285 0.975 1.591064607 0.25 0.296296296 0.525 27 1 0 39 2R:13943864-13943921 6 29 1111 FBgn0262739 6339.806667 111.4333333 171.8633333 0.004574272 0.260245289 0.168738727 2 2 2 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 13944051 13944056 - 2R_13944051_13944056_- 0.695430315 0.750262089 0.722846202 0.038771938 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 2R - 13944021 13944109 3'utr AGO1 FlyBase G23021.1 TCGTGCGTTAAGATTAGGGAGATCATCTGGTACATACCTTACTTTAAAAATCAACCAAAATGCCGGGTAATTAATCAATAAAATACATA 998 13944049 0.978693913 13 988 4028 0.993605116 2.793441133 0.007194245 0.182364729 0.347721823 998 7 1 1243 2R:13944021-13944109 6 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 13944025 13944104 3'utr AGO1 FlyBase G17449.1 CGTTAAGATTAGGGAGATCATCTGGTACATACCTTACTTTAAAAATCAACCAAAATGCCGGGTAATTAATCAATAAAATA 609 13944049 0.968658885 12 597 2386 0.977324263 2.458386011 0.003401361 0.318555008 0.529478458 609 18 2 862 2R:13944025-13944104 6 776 1112 FBgn0262739 6339.806667 111.4333333 171.8633333 0.122401209 6.963804966 4.515215578 -7 -7 -7 0.1 dme-miR-305-3p 8mer-m1 ATGTGCCG 2R 13944588 13944595 - 2R_13944588_13944595_- 0.628736554 0.628736519 0.628736536 7.07E-08 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 2R - 13944563 13944608 3'utr AGO1 FlyBase G23026.1 ATATTACTTATAAATGTGCCGTTTATAGATGTCTACAATTATATAC 17 13944593 0.738681045 6 16 164 1 1.255272505 0 0.058823529 0.111111111 17 0 0 18 2R:13944563-13944608 8 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 ATGTGCCG 8mer-m1 dme-miR-305-3p 2R - 13944560 13944605 3'utr AGO1 FlyBase G17453.1 TTACTTATAAATGTGCCGTTTATAGATGTCTACAATTATATACAAC 6 13944584 0.982702537 4 6 52 1 1 0.3 0.5 0.7 6 0 0 10 2R:13944560-13944605 8 9.5 1113 FBgn0262739 6339.806667 111.4333333 171.8633333 0.001498468 0.085252767 0.055276479 -2 -11 -6.5 0.1 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 13944733 13944739 - 2R_13944733_13944739_- 0.798048956 0.797839093 0.797944024 0.000148422 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 2R - 13944714 13944832 3'utr AGO1 FlyBase G23027.1 TATGTTCTGCTCAGAGGCAAGGCCCAAATAAAAAGACAAAAAGCCGGGATATCCAAATGGGAACTTACATTTTTATCTGTCAAAATTCAATTGAGCTTTAAACTAAAGATAGATCGAGA 158 13944741 0.976271152 12 150 963 0.945054945 2.235528447 0.027472527 0.120253165 0.236263736 158 10 0 172 2R:13944714-13944832 7 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 AGCTTTA 7mer-A1 dme-miR-79-3p 2R - 13944708 13944758 3'utr AGO1 FlyBase G17454.1 ATCTGTCAAAATTCAATTGAGCTTTAAACTAAAGATAGATCGAGAAAAAAC 52 13944741 0.805553155 3 49 371 0.927536232 1.806179974 0 0.288461538 0.463768116 52 5 0 64 2R:13944708-13944758 7 79.5 1114 FBgn0262739 6339.806667 111.4333333 171.8633333 0.012539815 0.71343105 0.462576854 2 2 2 0.1 dme-miR-980-5p 6mer3-8 GAAAAA 2R 13945044 13945049 - 2R_13945044_13945049_- 0.99202394 0.921902047 0.956962994 0.049583671 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 2R - 13945004 13945127 3'utr AGO1 FlyBase G23028.1 TGAAGCGGAAATATCGGTGGGAAAACCCTTATCACTAATGAAAATGCCAATAACAAGCTGCTATCTCCTCCCATCCAAGAAAAATGGGCTGTAACAGTTGTCCCTATATACACGCGTAAAACTT 41 13945043 0.985491643 8 36 203 0.888888889 1.602059991 0.288888889 0.073170732 0.155555556 41 5 0 40 2R:13945004-13945127 6 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 GAAAAA 6mer3-8 dme-miR-980-5p 2R - 13945024 13945125 3'utr AGO1 FlyBase G17456.1 AAGCGGAAATATCGGTGGGAAAACCCTTATCACTAATGAAAATGCCAATAACAAGCTGCTATCTCCTCCCATCCAAGAAAAATGGGCTGTAACAGTTGTCCC 21 13945043 0.983608347 8 16 94 0.78125 1.096910013 0.34375 0.333333333 0.5625 21 6 1 25 2R:13945024-13945125 6 7.5 1115 FBgn0262739 6339.806667 111.4333333 171.8633333 0.001183001 0.067304816 0.043639326 -6 -6 -6 0.1 dme-miR-33-5p 6mer2-7 AATGCA 2R 13945225 13945230 - 2R_13945225_13945230_- 0.999962754 0.999946315 0.999954534 1.17E-05 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 2R - 13945180 13945275 3'utr AGO1 FlyBase G23029.1 ATATTCACTTAGTTTAAGCTGAAGCTGAAATGTGTGCCGACAATGAATGCATCTCGTAGTTGTAAAATGAGCGAAATATTCAACAATAATTTACTT 414 13945228 0.983198604 15 401 3155 0.974248927 2.356025857 0.278969957 0.111111111 0.210300429 414 11 1 454 2R:13945180-13945275 6 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 AATGCA 6mer2-7 dme-miR-33-5p 2R - 13945201 13945340 3'utr AGO1 FlyBase G17457.1 AAAGGAGTTCGCGATTCGGGGCTCGATTTTTGAGATCGGCCAGAAAGAACCAACATTTACATTATATATTCACTTAGTTTAAGCTGAAGCTGAAATGTGTGCCGACAATGAATGCATCTCGTAGTTGTAAAATGAGCGAA 180 13945228 0.983135224 15 171 1306 0.954385965 2.133538908 0.242105263 0.388888889 0.614035088 180 12 1 272 2R:13945201-13945340 6 276.5 1116 FBgn0262739 6339.806667 111.4333333 171.8633333 0.043613317 2.481304218 1.608836479 -2 -2 -2 0.1 dme-miR-1003-3p 7mer-m8 ATGTGAG 2R 13946084 13946090 - 2R_13946084_13946090_- 0.671796203 0.671796142 0.671796172 7.07E-08 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 2R - 13945974 13946162 3'utr AGO1 FlyBase G23034.1 CATCCTTCTTCACAGAACCTTTAATTTAGATTTAGTTTCCAAGTTTGCAAGCTGTTTTGCCAATCGTACATTATGTGAGCATTATAAAATACATAATATATATAAATCTATATGCTTATATTTAATCATTTACTGCACTTACAAATTAGTTGGTAATCCTCAAGAATATATGTATAAAGAAAAAAAGGG 88 13946090 0.940822388 37 76 698 0.900990099 1.356981401 0.108910891 0.125 0.237623762 88 7 3 91 2R:13945974-13946162 7 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 ATGTGAG 7mer-m8 dme-miR-1003-3p 2R - 13945981 13946170 3'utr AGO1 FlyBase G17459.1 ATTGTATACATCCTTCTTCACAGAACCTTTAATTTAGATTTAGTTTCCAAGTTTGCAAGCTGTTTTGCCAATCGTACATTATGTGAGCATTATAAAATACATAATATATATAAATCTATATGCTTATATTTAATCATTTACTGCACTTACAAATTAGTTGGTAATCCTCAAGAATATATGTATAAAGAAA 62 13946106 0.984202686 24 56 504 0.904255319 1.452297671 0.042553191 0.338709677 0.563829787 62 7 2 85 2R:13945981-13946170 7 19 1117 FBgn0262739 6339.806667 111.4333333 171.8633333 0.002996937 0.170505534 0.110552959 0 16 8 0.1 dme-miR-999-3p 8mer-A1 AGTTAACA 2R 13946251 13946258 - 2R_13946251_13946258_- 0.643926167 0.643926235 0.643926201 0 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 2R - 13946182 13946304 3'utr AGO1 FlyBase G23034.2 ATGAAACGTATGCTTAGTAATTGTACTATATCGAGGACACAGTTCAAGTTAACATTATAATGAGTTGTTATTTATGCGGCGCGGGCGACGACGTTCTATCCACTCGGAATCGCCCGGGCCAAA 56 13946257 0.870147467 19 48 301 0.919354839 1.755874856 0.290322581 0.071428571 0.161290323 56 5 0 57 2R:13946182-13946304 8 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 AGTTAACA 8mer-A1 dme-miR-999-3p 2R - 13946214 13946293 3'utr AGO1 FlyBase G17460.1 GCTTAGTAATTGTACTATATCGAGGACACAGTTCAAGTTAACATTATAATGAGTTGTTATTTATGCGGCGCGGGCGACGA 39 13946255 0.98507182 11 29 236 0.745454545 0.913813852 0.418181818 0.358974359 0.545454545 39 10 4 41 2R:13946214-13946293 8 26 1118 FBgn0262739 6339.806667 111.4333333 171.8633333 0.004101071 0.233323362 0.151282996 -1 -3 -2 0.1 dme-miR-283-5p 8mer-m1 TGATATTT 2R 13946734 13946741 - 2R_13946734_13946741_- 0.555590217 0.555584559 0.555587388 3.96E-06 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 2R - 13946560 13946840 3'utr AGO1 FlyBase G23036.1 GAAACGATAACCAAGCGGATGGAGCTGTTGTAACAATGTAGATTACTTAAATTCAAAAGTGCAAATAACACGGTAGCAGACACGTTACGTTGGCAGTGCTGATATTTTATGTTAGTCCTTAGTTTACCCTCTTTTATGCACCACACCACCACACAATCAGACTCCGAACTTCTTCAACCCTCCTCGAGTCCAAGGCATATCACTCAATGTCCTCTTATTTATGTACCTCCTACAATAAGCCTTATGATATATTTAGTTGTACCTTATATATATATATATAT 345 13946744 0.942663734 53 306 2742 0.898383372 1.744851561 0.113163972 0.208695652 0.369515012 345 38 6 389 2R:13946560-13946840 8 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 TGATATTT 8mer-m1 dme-miR-283-5p 2R - 13946724 13946835 3'utr AGO1 FlyBase G17461.3 GATAACCAAGCGGATGGAGCTGTTGTAACAATGTAGATTACTTAAATTCAAAAGTGCAAATAACACGGTAGCAGACACGTTACGTTGGCAGTGCTGATATTTTATGTTAGTC 142 13946744 0.986197784 19 113 1058 0.795454545 1.765916794 0.195454545 0.408450704 0.618181818 142 43 2 175 2R:13946724-13946835 8 144.5 1119 FBgn0262739 6339.806667 111.4333333 171.8633333 0.022792493 1.296739456 0.840784344 3 3 3 0.1 dme-miR-988-3p 8mer-A1 ACAAGGGA 2R 13946936 13946943 - 2R_13946936_13946943_- 0.606904394 0.610649969 0.608777182 0.002648539 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 2R - 13946860 13947264 3'utr AGO1 FlyBase G23037.1 ACAGCAAACACCACATGAACACCAACCACTCGGATTCTCTGTACTGTGAACGAAGACCACCACCAAAATATAAACAAAAACCACAAGCGACATTAAAGCGACAAGCATTGAAAGAGTGTGTAGACACAACTTAGCATGTACTAATGAATTACTTCAATACTTCAACTAGGGCGCTGACAAAACCAAGCAAGAACATTTAATAGTTTGTAAGTTGGGCTCTACCAAAAACCGAACACAAAATGAGAGAGAGAGAGAGAGAGAAAAATGCAAGCAAGGCCAGATAAGTTAAGTGGGCAATGAATAACGAGAACTGCAATTTCAACAAGGGACAAACTTTTGGTCAAAACAATAGCTATACTTATAGAGCAGAGCCTAATATATACATACATAATTAGAATCTAAAAC 268 13946947 0.999995042 55 250 1217 0.938110749 1.681241237 0.182410423 0.130597015 0.241042345 268 14 5 288 2R:13946860-13947264 8 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 ACAAGGGA 8mer-A1 dme-miR-988-3p 2R - 13946845 13947073 3'utr AGO1 FlyBase G17462.1 AACATTTAATAGTTTGTAAGTTGGGCTCTACCAAAAACCGAACACAAAATGAGAGAGAGAGAGAGAGAGAAAAATGCAAGCAAGGCCAGATAAGTTAAGTGGGCAATGAATAACGAGAACTGCAATTTCAACAAGGGACAAACTTTTGGTCAAAACAATAGCTATACTTATAGAGCAGAGCCTAATATATACATACATAATTAGAATCTAAAACTAAAATTTAAAGTTT 142 13946947 0.947976752 26 132 504 0.932126697 1.614897216 0.221719457 0.401408451 0.615384615 142 11 4 206 2R:13946845-13947073 8 56 1120 FBgn0262739 6339.806667 111.4333333 171.8633333 0.008833077 0.502542626 0.325840299 4 4 4 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2R 13973086 13973091 - 2R_13973086_13973091_- 0.635368459 0.77987275 0.707620604 0.1021799 CG6701 FBtr0339957|FBtr0303991|FBtr0303990|FBtr0303989 13972982|13972982|13972982|13972982 13973652|13973652|13973652|13973652 2R - 13973033 13973129 3'utr CG6701 FlyBase G23078.1 AAGTAAAAACTTGCTGACTCCTTGTGTCATCGGTTCTGAAGACTTGAAACAATTTGACAATGTAGAAAACAATATGTATATGCCCGACAAACTATTT 24 13973093 0.975000055 11 23 150 1 1.505149978 0.15625 0.291666667 0.46875 24 0 0 32 2R:13973033-13973129 6 CG6701 FBtr0303990|FBtr0303989|FBtr0339957|FBtr0303991 13972982|13972982|13972982|13972982 13973652|13973652|13973652|13973652 AAGACT 6mer3-8 dme-miR-14-3p 2R - 13973080 13973107 3'utr CG6701 FlyBase G17496.1 TGTGTCATCGGTTCTGAAGACTTGAAAC 5 13973093 0.794693685 2 5 35 1 0.84509804 0.428571429 0.4 0.571428571 5 0 0 7 2R:13973080-13973107 6 10 1121 FBgn0033889 5221.26 120.4433333 183.47 0.001915247 0.083026596 0.054504824 2 2 2 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 2R 13973565 13973570 - 2R_13973565_13973570_- 0.540413506 0.604946153 0.57267983 0.04563151 CG6701 FBtr0339957|FBtr0303991|FBtr0303990|FBtr0303989 13972982|13972982|13972982|13972982 13973652|13973652|13973652|13973652 2R - 13973514 13973623 3'utr CG6701 FlyBase G23080.1 CTATAGGGACAACGTGATTGCTTGGCCGAACAAGTGATCTCGCTGTCCTCTTTTTGACTTTGCTATTGGCATTTGTGCGATCTGCGATCATCCATGCGCCAAGTAGCAAA 35 13973589 0.985100945 13 33 265 0.930232558 1.602059991 0.139534884 0.228571429 0.372093023 35 3 0 40 2R:13973514-13973623 6 CG6701 FBtr0303990|FBtr0303989|FBtr0339957|FBtr0303991 13972982|13972982|13972982|13972982 13973652|13973652|13973652|13973652 TTGACT 6mer3-8 dme-miR-1012-3p 2R - 13973552 13973622 3'utr CG6701 FlyBase G17500.1 TATAGGGACAACGTGATTGCTTGGCCGAACAAGTGATCTCGCTGTCCTCTTTTTGACTTTGCTATTGGCAT 22 13973563 0.874786682 6 19 149 0.870967742 1.431363764 0.032258065 0.318181818 0.516129032 22 4 0 27 2R:13973552-13973622 6 8.5 1122 FBgn0033889 5221.26 120.4433333 183.47 0.00162796 0.070572607 0.0463291 19 -7 6 0.1 dme-miR-33-5p 7mer-A1 AATGCAA 2R 13985083 13985089 - 2R_13985083_13985089_- 0.782911824 0.782911824 0.782911824 0 RN-tre FBtr0087603|FBtr0330626|FBtr0330627 13984813|13984813|13984813 13985779|13985779|13985596 2R - 13985051 13985134 3'utr RN-tre FlyBase G23115.1 GTACCAAACAAAATACAAAGCAACGTTAAAAAGTTACGTCCATGAAATGCAAACGAATGTAAAGGCGAAAGGCAACCAAATATT 45 13985101 0.960432982 8 42 207 0.941176471 1.681241237 0.176470588 0.133333333 0.235294118 45 3 0 48 2R:13985051-13985134 7 RN-tre FBtr0330626|FBtr0330627|FBtr0087603 13984813|13984813|13984813 13985779|13985596|13985779 AATGCAA 7mer-A1 dme-miR-33-5p 2R - 13985031 13985121 3'utr RN-tre FlyBase G17524.1 TACAAAGCAACGTTAAAAAGTTACGTCCATGAAATGCAAACGAATGTAAAGGCGAAAGGCAACCAAATATTAATTGAAAACTATAGATAAC 35 13985101 0.957442506 7 35 166 1 1.748188027 0.25 0.514285714 0.696428571 35 0 0 56 2R:13985031-13985121 7 29 1123 FBgn0020620 1475.656667 67.63 103.75 0.019652268 0.428803785 0.279518072 12 12 12 0.1 dme-miR-278-3p 6mer2-7 CCACCG 2R 13985492 13985497 - 2R_13985492_13985497_- 0.980987654 0.999999999 0.990493826 0.013443726 RN-tre FBtr0087603|FBtr0330626|FBtr0330627 13984813|13984813|13984813 13985779|13985779|13985596 2R - 13985465 13985541 3'utr RN-tre FlyBase G23117.1 TAGCCGTCGTCTGCCTTTGATTAGCCTTAAGTCTTCAAGCCCTGCCACCGCTGCAAACACTAGAGCTAGGCCTTCCA 10 13985490 0.94897024 8 10 54 1 1.041392685 0.363636364 0.1 0.181818182 10 0 0 11 2R:13985465-13985541 6 RN-tre FBtr0330626|FBtr0330627|FBtr0087603 13984813|13984813|13984813 13985779|13985596|13985779 CCACCG 6mer2-7 dme-miR-278-3p 2R - 13985454 13985513 3'utr RN-tre FlyBase G17527.1 AAGTCTTCAAGCCCTGCCACCGCTGCAAACACTAGAGCTAGGCCTTCCATGGGTGCAGCC 5 13985490 0.923781184 4 5 19 1 1 0 0.6 0.8 5 0 0 10 2R:13985454-13985513 6 3.5 1124 FBgn0020620 1475.656667 67.63 103.75 0.002371825 0.051752181 0.03373494 -7 -7 -7 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 13986572 13986579 - 2R_13986572_13986579_- 0.498346371 0.425896119 0.462121245 0.051230098 RN-tre FBtr0087605 13986424 13987040 2R - 13986531 13986622 3'utr RN-tre FlyBase G23118.1 TACTAGCATAAACCAACTGATTAGGTAACTTAAGCTTTGCTCTTGCATTTACTTTATATTTGCATTACAAACAAAACTCAACTTTTAGTTTA 24 13986580 0.869135622 11 24 204 1 1.462397998 0.068965517 0.208333333 0.344827586 24 0 0 29 2R:13986531-13986622 8 RN-tre FBtr0087605 13986424 13987040 TGCATTTA 8mer-A1 dme-miR-277-3p 2R - 13986566 13986621 3'utr RN-tre FlyBase G17529.1 ACTAGCATAAACCAACTGATTAGGTAACTTAAGCTTTGCTCTTGCATTTACTTTAT 23 13986580 0.952413798 6 21 211 0.896551724 1.414973348 0.103448276 0.260869565 0.413793103 23 3 0 26 2R:13986566-13986621 8 13.5 1125 FBgn0020620 1475.656667 67.63 103.75 0.009148469 0.199615555 0.130120482 1 1 1 0.1 dme-miR-252-5p 8mer-m1 GTACTTAG 2R 13986882 13986889 - 2R_13986882_13986889_- 0.635170048 0.636339154 0.635754601 0.000826749 RN-tre FBtr0087605 13986424 13987040 2R - 13986850 13986910 3'utr RN-tre FlyBase G23120.1 ATTCGGTAGTAATATCCACATGTACTTAGCTTTAATTTTTGTATTGTCGAACCGACAGAAA 13 13986889 0.989089527 4 13 123 1 1.255272505 0 0.230769231 0.444444444 13 0 0 18 2R:13986850-13986910 8 RN-tre FBtr0087605 13986424 13987040 GTACTTAG 8mer-m1 dme-miR-252-5p 2R - 13986843 13986909 3'utr RN-tre FlyBase G17530.1 TTCGGTAGTAATATCCACATGTACTTAGCTTTAATTTTTGTATTGTCGAACCGACAGAAACCTGAAA 10 13986890 0.98649581 3 10 90 1 1.176091259 0 0.4 0.6 10 0 0 15 2R:13986843-13986909 8 11 1126 FBgn0020620 1475.656667 67.63 103.75 0.007454308 0.162649712 0.106024096 0 1 0.5 0.1 dme-miR-276a-3p 6mer2-7 GTTCCT 2R 14058116 14058121 + 2R_14058116_14058121_+ 0.999901828 0.999878136 0.999889982 1.68E-05 mam FBtr0339956|FBtr0087597|FBtr0087596 14057913|14057913|14057913 14060356|14060356|14058697 2R + 14058088 14058134 3'utr mam FlyBase G15704.1 AACCGCCCCACACGGCCCCGCCCCCCTTGTTCCTGCCAACGAAGTTA 61 14058117 0.958972264 5 60 246 1 1.819543936 0.303030303 0.066666667 0.151515152 60 0 0 66 2R:14058088-14058134 6 mam FBtr0087596|FBtr0339956|FBtr0087597 14057913|14057913|14057913 14058697|14060356|14060356 GTTCCT 6mer2-7 dme-miR-276a-3p 2R + 14058091 14058135 3'utr mam FlyBase G11911.1 CGCCCCACACGGCCCCGCCCCCCTTGTTCCTGCCAACGAAGTTAT 29 14058117 0.947479265 3 28 121 0.975609756 1.301029996 0.292682927 0.275862069 0.487804878 29 0 1 40 2R:14058091-14058135 6 44.5 1127 FBgn0002643 1627.19 27.33666667 41.79333333 0.027347759 1.627850262 1.06476312 -1 -1 -1 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 14058480 14058487 + 2R_14058480_14058487_+ 0.500119984 0.500120046 0.500120015 0 mam FBtr0339956|FBtr0087597|FBtr0087596 14057913|14057913|14057913 14060356|14060356|14058697 2R + 14058442 14058492 3'utr mam FlyBase G15706.1 TACAGATACTACAGACTCGTTGTGCAACTTAAGCACTTGTACTTAATGCAA 12 14058479 0.982339257 4 12 91 1 1.079181246 0.083333333 0 0 12 0 0 12 2R:14058442-14058492 8 mam FBtr0087596|FBtr0339956|FBtr0087597 14057913|14057913|14057913 14058697|14060356|14060356 GTACTTAA 8mer-A1 dme-miR-252-5p 2R + 14058442 14058492 3'utr mam FlyBase G11914.1 TACAGATACTACAGACTCGTTGTGCAACTTAAGCACTTGTACTTAATGCAA 7 14058479 0.980313255 3 7 52 1 1 0 0.285714286 0.5 7 0 0 10 2R:14058442-14058492 8 8 1128 FBgn0002643 1627.19 27.33666667 41.79333333 0.004916451 0.292647238 0.191418089 1 1 1 0.1 dme-miR-283-5p 8mer-m1 TGATATTT 2R 14058781 14058788 + 2R_14058781_14058788_+ 0.55482394 0.555522724 0.555173332 0.000494126 mam FBtr0339956|FBtr0087597 14057913|14057913 14060356|14060356 2R + 14058731 14058801 stop_codon mam FlyBase G15707.1 AATGGGAAAACAGATCGAGAAACTTTCAGAATAAAGAGCAAAAATATTGGTGATATTTTAAATGCTTAAAC 141 14058777 0.984709609 5 139 1113 0.987804878 2.209515015 0.012195122 0.14893617 0.268292683 141 2 0 162 2R:14058731-14058801 8 mam FBtr0339956|FBtr0087597 14057913|14057913 14060356|14060356 TGATATTT 8mer-m1 dme-miR-283-5p 2R + 14058741 14058801 stop_codon mam FlyBase G11915.1 CAGATCGAGAAACTTTCAGAATAAAGAGCAAAAATATTGGTGATATTTTAAATGCTTAAAC 91 14058777 0.961627573 8 90 719 0.991304348 2.056904851 0 0.230769231 0.391304348 91 1 0 114 2R:14058741-14058801 8 113.5 1129 FBgn0002643 1627.19 27.33666667 41.79333333 0.069752149 4.151932691 2.715744138 4 4 4 0.1 dme-miR-33-5p 7mer-A1 AATGCAA 2R 14060560 14060566 - 2R_14060560_14060566_- 0.782909584 0.782911689 0.782910636 1.48E-06 Prosap FBtr0339764 14060454 14062325 2R - 14060499 14060593 3'utr Prosap FlyBase G23139.1 AGCACACACCACCACACATACACTTTAAATGCAAGTATTTCAAATGGAATAATACGGAAATATATATCATAAGTCGTAAAATATGCAATTATGTA 11 14060575 0.974862043 8 11 61 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 2R:14060499-14060593 7 Prosap FBtr0339764 14060454 14062325 AATGCAA 7mer-A1 dme-miR-33-5p 2R - 14060535 14060578 3'utr Prosap FlyBase G17542.1 ACATACACTTTAAATGCAAGTATTTCAAATGGAATAATACGGAA 5 14060568 0.966030999 3 5 27 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2R:14060535-14060578 7 4.5 1130 FBgn0040752 4396.62 61.27 94.33 0.001023514 0.073445406 0.047704866 9 2 5.5 0.1 dme-miR-12-5p 6mer2-7 ATACTC 2R 14060911 14060916 - 2R_14060911_14060916_- 0.999999995 0.999992838 0.999996416 5.09E-06 Prosap FBtr0339764 14060454 14062325 2R - 14060860 14060930 3'utr Prosap FlyBase G23141.1 CGAGAATATATTGGATACTCTAGCGTATAACTAGATTTTAGCACACTTTTTAGTTCTCGCAATAGTTGCTA 12 14060920 0.633801613 7 11 99 0.923076923 1.079181246 0.076923077 0.083333333 0.153846154 12 1 0 12 2R:14060860-14060930 6 Prosap FBtr0339764 14060454 14062325 ATACTC 6mer2-7 dme-miR-12-5p 2R - 14060847 14060930 3'utr Prosap FlyBase G17544.1 CGAGAATATATTGGATACTCTAGCGTATAACTAGATTTTAGCACACTTTTTAGTTCTCGCAATAGTTGCTAATTATTTGTAAAT 19 14060920 0.787895924 9 17 143 0.958333333 1.361727836 0.5 0.263157895 0.416666667 19 1 0 23 2R:14060847-14060930 6 8.5 1131 FBgn0040752 4396.62 61.27 94.33 0.001933303 0.138730211 0.090109191 4 4 4 0.1 dme-miR-1006-3p 7mer-m8 CGAATTT 2R 14061620 14061626 - 2R_14061620_14061626_- 0.659220357 0.661110736 0.660165547 0.001336644 Prosap FBtr0339765|FBtr0339763|FBtr0087601|FBtr0339764 14061497|14061497|14061497|14060454 14062325|14062325|14062325|14062325 2R - 14061595 14061630 3'utr Prosap FlyBase G23146.1 TAGCCGAATTTCCAGTCAAGTCAAGTCAACTAAACT 5 14061621 0.965974023 2 5 27 1 0.84509804 0 0.2 0.428571429 5 0 0 7 2R:14061595-14061630 7 Prosap FBtr0087601|FBtr0339764|FBtr0339765|FBtr0339763 14061497|14060454|14061497|14061497 14062325|14062325|14062325|14062325 CGAATTT 7mer-m8 dme-miR-1006-3p 2R - 14061595 14061636 3'utr Prosap FlyBase G17548.1 AGCATTTAGCCGAATTTCCAGTCAAGTCAAGTCAACTAAACT 8 14061621 0.962460402 2 7 38 1 1.079181246 0 0.5 0.666666667 8 0 0 12 2R:14061595-14061636 7 6 1132 FBgn0040752 4396.62 61.27 94.33 0.001364685 0.097927207 0.063606488 -5 -5 -5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 14062073 14062079 - 2R_14062073_14062079_- 0.799882298 0.792835372 0.796358835 0.004982911 Prosap FBtr0339765|FBtr0339765|FBtr0339765|FBtr0339763|FBtr0339763|FBtr0339763|FBtr0087601|FBtr0087601|FBtr0087601|FBtr0339764|FBtr0339764|FBtr0339764 14061497|14061497|14061497|14061497|14061497|14061497|14061497|14061497|14061497|14060454|14060454|14060454 14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325 2R - 14062041 14062100 3'utr Prosap FlyBase G23151.1 ACTTTTATTATATTTATTGCGTGTGATATAAATTTATGCAAGCTGCCCGCGAGCAGCAAC 131 14062086 0.992824521 11 122 1457 0.91875 1.565257343 0.05 0.20610687 0.35 131 10 3 147 2R:14062041-14062100 7 Prosap FBtr0087601|FBtr0087601|FBtr0087601|FBtr0339764|FBtr0339764|FBtr0339764|FBtr0339765|FBtr0339765|FBtr0339765|FBtr0339763|FBtr0339763|FBtr0339763 14061497|14061497|14061497|14060454|14060454|14060454|14061497|14061497|14061497|14061497|14061497|14061497 14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 14062040 14062135 3'utr Prosap FlyBase G17553.1 GAATTAGAATTTTCTTGATTTCGAAATCTTAAGTTACTTTTATTATATTTATTGCGTGTGATATAAATTTATGCAAGCTGCCCGCGAGCAGCAACT 95 14062086 0.992747966 14 87 1022 0.905109489 2.093421685 0.051094891 0.336842105 0.540145985 95 13 0 124 2R:14062040-14062135 7 105 1133 FBgn0040752 4396.62 61.27 94.33 0.023881982 1.71372613 1.113113538 7 7 7 0.1 dme-miR-34-5p 6mer2-7 ACTGCC 2R 14062221 14062226 - 2R_14062221_14062226_- 0.963035475 0.986090084 0.97456278 0.016302064 Prosap FBtr0339765|FBtr0339763|FBtr0087601|FBtr0339764 14061497|14061497|14061497|14060454 14062325|14062325|14062325|14062325 2R - 14062209 14062321 3'utr Prosap FlyBase G23153.1 AGCCTGGGGAATCAAATCAACCGTTTGCCAAATCGTTAAATCGTTAGTTAGTGTAAGTCAACAACAGTCATTGCCACTCACAACGAATAGCCGCAACTGCCTGCACCCAGAAA 51 14062220 0.957023551 12 49 194 0.967213115 1.770852012 0.06557377 0.137254902 0.278688525 51 2 0 59 2R:14062209-14062321 6 Prosap FBtr0087601|FBtr0339764|FBtr0339765|FBtr0339763 14061497|14060454|14061497|14061497 14062325|14062325|14062325|14062325 ACTGCC 6mer2-7 dme-miR-34-5p 2R - 14062209 14062317 3'utr Prosap FlyBase G17555.1 TGGGGAATCAAATCAACCGTTTGCCAAATCGTTAAATCGTTAGTTAGTGTAAGTCAACAACAGTCATTGCCACTCACAACGAATAGCCGCAACTGCCTGCACCCAGAAA 35 14062220 0.932919664 8 33 116 1 1.770852012 0.101694915 0.428571429 0.661016949 35 0 0 59 2R:14062209-14062317 6 24.5 1134 FBgn0040752 4396.62 61.27 94.33 0.005572462 0.39986943 0.259726492 -6 -6 -6 0.1 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 14166705 14166712 + 2R_14166705_14166712_+ 0.605654138 0.605653735 0.605653937 2.83E-07 CG8323 FBtr0087521 14166669 14166991 2R + 14166653 14166715 stop_codon CG8323 FlyBase G15738.1 AAGTATAGTAATCAATGACCCCAAAGATCACTGGCTAGGTAGCATTAATTTAAGTACAAAATT 5 14166702 0.987759734 4 5 34 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2R:14166653-14166715 8 CG8323 FBtr0087521 14166669 14166991 AGTACAAA 8mer-A1 dme-miR-305-5p 2R + 14166675 14166718 3'utr CG8323 FlyBase G11935.1 AAAGATCACTGGCTAGGTAGCATTAATTTAAGTACAAAATTGTT 6 14166702 0.984168723 3 6 53 1 0.954242509 0 0.5 0.666666667 6 0 0 9 2R:14166675-14166718 8 4 1135 FBgn0033903 176.6666667 14.75333333 22.46333333 0.022641509 0.271125169 0.178067963 3 3 3 0.1 dme-miR-305-3p 6mer2-7 TGTGCC 2R 14166907 14166912 + 2R_14166907_14166912_+ 0.999991472 0.999990127 0.999990799 9.90E-07 CG8323 FBtr0087521 14166669 14166991 2R + 14166895 14166950 3'utr CG8323 FlyBase G15741.1 CCAGAACCAACTTGTGCCTTCATTAAGCTAATTTAAGAGCTCTTCCTGTAGCCATT 23 14166907 0.847413638 7 22 172 0.961538462 1.096910013 0.038461538 0.130434783 0.230769231 23 0 1 25 2R:14166895-14166950 6 CG8323 FBtr0087521 14166669 14166991 TGTGCC 6mer2-7 dme-miR-305-3p 2R + 14166859 14166948 3'utr CG8323 FlyBase G11936.1 AATGTCCTAGTTCCAATCTCTTAGATTAGCAAAGCCCCAGAACCAACTTGTGCCTTCATTAAGCTAATTTAAGAGCTCTTCCTGTAGCCA 20 14166907 0.822705524 7 17 146 0.931034483 1.130333768 0.172413793 0.35 0.551724138 20 1 1 27 2R:14166859-14166948 6 12.5 1136 FBgn0033903 176.6666667 14.75333333 22.46333333 0.070754717 0.847266155 0.556462383 0 0 0 0.1 dme-miR-13b-2-5p 7mer-A1 TTGACGA 2R 14181915 14181921 + 2R_14181915_14181921_+ 0.782911261 0.782911824 0.782911542 3.54E-07 cg FBtr0339961|FBtr0290035|FBtr0112795|FBtr0346946 14181377|14181377|14180447|14180447 14182838|14182838|14182838|14182838 2R + 14181876 14181959 3'utr cg FlyBase G15768.1 ATGCCTAAGTGTAAACTGTATACATATTAACATGAAACATTGACGACTACGGATAGTACTAGACACTAGCATGCGTTGCACTTG 23 14181935 0.971449635 9 21 124 0.92 1.06069784 0.28 0.086956522 0.16 23 1 1 23 2R:14181876-14181959 7 cg FBtr0112795|FBtr0346946|FBtr0339961|FBtr0290035 14180447|14180447|14181377|14181377 14182838|14182838|14182838|14182838 TTGACGA 7mer-A1 dme-miR-13b-2-5p 2R + 14181783 14181958 3'utr cg FlyBase G11959.1 TAAAGCGTTACGTTCAATTGGTTTTACGCATTACACGATTTTTAATAACACAACTTATACACAAACTTATATTCAAATAGACGAAAAATATTTATGCCTAAGTGTAAACTGTATACATATTAACATGAAACATTGACGACTACGGATAGTACTAGACACTAGCATGCGTTGCACTT 25 14181934 0.972757612 14 23 149 0.925 1.091080469 0.275 0.44 0.65 25 1 2 37 2R:14181783-14181958 7 9.5 1137 FBgn0000289 2715.146667 76.72333333 117.4833333 0.00349889 0.123821523 0.080862534 -20 -19 -19.5 0.1 dme-miR-277-3p 6mer2-7 GCATTT 2R 14182084 14182089 + 2R_14182084_14182089_+ 0.554697588 0.494092472 0.52439503 0.042854277 cg FBtr0339961|FBtr0290035|FBtr0112795|FBtr0346946 14181377|14181377|14180447|14180447 14182838|14182838|14182838|14182838 2R + 14182066 14182093 3'utr cg FlyBase G15769.1 CAGAATCGCGTTGGTGCAGCATTTTTTG 6 14182090 0.892505362 3 5 35 0.857142857 0.77815125 0.428571429 0.166666667 0.285714286 6 1 0 6 2R:14182066-14182093 6 cg FBtr0112795|FBtr0346946|FBtr0339961|FBtr0290035 14180447|14180447|14181377|14181377 14182838|14182838|14182838|14182838 GCATTT 6mer2-7 dme-miR-277-3p 2R + 14182037 14182093 3'utr cg FlyBase G11960.1 CGAAGAGGGGGGAGGGGGGTATTCCTGCCCAGAATCGCGTTGGTGCAGCATTTTTTG 6 14182090 0.978083369 4 6 39 1 1.041392685 0.818181818 0.5 0.727272727 6 0 0 11 2R:14182037-14182093 6 5 1138 FBgn0000289 2715.146667 76.72333333 117.4833333 0.001841521 0.065169223 0.042559228 -6 -6 -6 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 14215232 14215239 - 2R_14215232_14215239_- 0.500120239 0.500120297 0.500120268 7.07E-08 RpS23 FBtr0087575 14215094 14215434 2R - 14215216 14215280 3'utr RpS23 FlyBase G23204.1 GAATATAGTGATTCCAATCGATTCTGTTTTATAAGGCCGATGTACTTAATGAGTTACATACTTGC 48 14215240 0.984389598 9 44 342 0.909090909 1.397940009 0.2 0.145833333 0.254545455 48 4 1 50 2R:14215216-14215280 8 RpS23 FBtr0087575 14215094 14215434 GTACTTAA 8mer-A1 dme-miR-252-5p 2R - 14215184 14215267 3'utr RpS23 FlyBase G17590.1 CCAATCGATTCTGTTTTATAAGGCCGATGTACTTAATGAGTTACATACTTGCATATTTAAACTATAACAGTTTACAGTTTTCGT 30 14215240 0.988945282 7 26 246 0.82 1.135662602 0.16 0.466666667 0.68 30 7 2 41 2R:14215184-14215267 8 37 1139 FBgn0033912 13740.81 3287.363333 4993.36 0.002692709 0.011255221 0.00740984 1 1 1 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 2R 14215327 14215333 - 2R_14215327_14215333_- 0.442599824 0.443116982 0.442858403 0.000365716 RpS23 FBtr0087575 14215094 14215434 2R - 14215316 14215352 3'utr RpS23 FlyBase G23205.1 GTTAAATGTTTCAATTAAATGTGATTTCCTTGAATAT 53 14215327 0.735824712 5 52 499 0.985915493 1.84509804 0.169014085 0.20754717 0.408450704 53 1 0 70 2R:14215316-14215352 7 RpS23 FBtr0087575 14215094 14215434 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 14215315 14215457 stop_codon RpS23 FlyBase G17591.1 AGAAGGAACGCCCAAGATCTTAGATGAACATGCATCTAATCTTTTTCCAGACAAGCAGAGTTAGGGTTTTACAAATCTAAATAAACAAAAAACAGAAACAAACTTGTTAAATGTTTCAATTAAATGTGATTTCCTTGAATATA 95 14215327 0.919477356 24 85 809 0.919708029 1.197280558 0.145985401 0.326315789 0.532846715 95 4 7 126 2R:14215315-14215457 7 59.5 1140 FBgn0033912 13740.81 3287.363333 4993.36 0.004330167 0.018099612 0.011915824 -6 -6 -6 0.1 dme-miR-2b-2-5p 6mer2-7 TGAAGA 2R 14229591 14229596 + 2R_14229591_14229596_+ 1 0.999999987 0.999999993 0 CG8468 FBtr0087533|FBtr0087534|FBtr0087532 14229566|14229566|14229566 14230620|14230620|14230620 2R + 14229537 14229613 stop_codon CG8468 FlyBase G15802.1 CGAGAAGCTAACACCCCTGCCGGCGGCCTAAGGAGCTGCTTGGATCGGAGCGAATGAAGACATGCCAGACAGCCTGA 21 14229591 0.80576175 8 19 40 0.904761905 1.278753601 0.333333333 0 0 21 2 0 19 2R:14229537-14229613 6 CG8468 FBtr0087532|FBtr0087533|FBtr0087534 14229566|14229566|14229566 14230620|14230620|14230620 TGAAGA 6mer2-7 dme-miR-2b-2-5p 2R + 14229536 14229609 stop_codon CG8468 FlyBase G11989.1 ACGAGAAGCTAACACCCCTGCCGGCGGCCTAAGGAGCTGCTTGGATCGGAGCGAATGAAGACATGCCAGACAGC 16 14229591 0.991188258 6 15 31 0.956521739 1.342422681 0.47826087 0.375 0.565217391 16 1 0 22 2R:14229536-14229609 6 12 1141 FBgn0033913 3375.036667 105.6 161.63 0.003555517 0.113636364 0.074243643 0 0 0 0.1 dme-miR-184-5p 7mer-A1 GATAAGA 2R 14229765 14229771 + 2R_14229765_14229771_+ 0.781566824 0.782331178 0.781949001 0.000540512 CG8468 FBtr0087533|FBtr0087534|FBtr0087532 14229566|14229566|14229566 14230620|14230620|14230620 2R + 14229632 14229825 3'utr CG8468 FlyBase G15803.1 AGCCACAACTATCTTCGATAGCACCTTTCGGTATTGGCAACATTAATTGACAATCACTCATCCTGTCGAAGGAACTCCCGATTTCGGAGGGAAGCGAGTGCGAAAGCGTGTTCCGAGTACTTAATACAATTAAGATAAGACTAATCGTAATGTTGTGCCTTCAGCGATATCGAGTGCCTACCACACACACCCCT 75 14229756 0.974011666 26 69 438 0.892857143 1.875061263 0.273809524 0.106666667 0.202380952 75 9 0 75 2R:14229632-14229825 7 CG8468 FBtr0087532|FBtr0087533|FBtr0087534 14229566|14229566|14229566 14230620|14230620|14230620 GATAAGA 7mer-A1 dme-miR-184-5p 2R + 14229724 14229822 3'utr CG8468 FlyBase G11990.2 AGCGAGTGCGAAAGCGTGTTCCGAGTACTTAATACAATTAAGATAAGACTAATCGTAATGTTGTGCCTTCAGCGATATCGAGTGCCTACCACACACACC 36 14229756 0.954831493 14 33 219 0.918367347 1.653212514 0.102040816 0.305555556 0.489795918 36 4 0 45 2R:14229724-14229822 7 17 1142 FBgn0033913 3375.036667 105.6 161.63 0.005036982 0.160984848 0.105178494 9 9 9 0.1 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 14229904 14229910 + 2R_14229904_14229910_+ 0.82333369 0.82333077 0.82333223 2.05E-06 CG8468 FBtr0087533|FBtr0087534|FBtr0087532 14229566|14229566|14229566 14230620|14230620|14230620 2R + 14229834 14229925 3'utr CG8468 FlyBase G15804.1 ACAACCAACCCTATCCCAAATCACACGCATACGAGCAGAGTGGAGCGCGAGTGTAAATTATGTTTCTATAAGCTTTAGTGGAGGAGCCCATA 571 14229902 0.795326617 16 533 4754 0.937125749 1.517820732 0.393712575 0.133333333 0.260479042 570 24 18 626 2R:14229834-14229925 7 CG8468 FBtr0087532|FBtr0087533|FBtr0087534 14229566|14229566|14229566 14230620|14230620|14230620 AGCTTTA 7mer-A1 dme-miR-79-3p 2R + 14229883 14229925 3'utr CG8468 FlyBase G11991.2 AGTGTAAATTATGTTTCTATAAGCTTTAGTGGAGGAGCCCATA 290 14229902 0.755286871 8 269 2449 0.934939759 1.474888373 0.568674699 0.34375 0.544578313 288 15 12 388 2R:14229883-14229925 7 420 1143 FBgn0033913 3375.036667 105.6 161.63 0.124443092 3.977272727 2.598527501 2 2 2 0.1 dme-miR-2a-2-5p 7mer-m1 GATGAGG 2R 14230350 14230356 + 2R_14230350_14230356_+ 0.825493347 0.538126735 0.681810041 0.203198872 CG8468 FBtr0087533|FBtr0087534|FBtr0087532 14229566|14229566|14229566 14230620|14230620|14230620 2R + 14230296 14230374 3'utr CG8468 FlyBase G15805.1 CGCATCGCGGGATTAGCCGATCGTGGACAAAACGAAACAAACAATCAACCGCACGATGAGGCATCTGGTAAAAGTGCTG 23 14230352 0.982134278 4 21 69 1 1.397940009 0.24 0.086956522 0.16 23 0 0 25 2R:14230296-14230374 7 CG8468 FBtr0087532|FBtr0087533|FBtr0087534 14229566|14229566|14229566 14230620|14230620|14230620 GATGAGG 7mer-m1 dme-miR-2a-2-5p 2R + 14230325 14230403 3'utr CG8468 FlyBase G11993.1 AAACGAAACAAACAATCAACCGCACGATGAGGCATCTGGTAAAAGTGCTGTGCTCTTATGCAAACCGATTTAAATATAT 15 14230352 0.94608614 8 15 65 1 1.397940009 0.12 0.466666667 0.68 15 0 0 25 2R:14230325-14230403 7 14.5 1144 FBgn0033913 3375.036667 105.6 161.63 0.00429625 0.137310606 0.089711068 -2 -2 -2 0.1 dme-miR-277-3p 6mer3-8 TGCATT 2R 14230561 14230566 + 2R_14230561_14230566_+ 0.996478868 1 0.998239434 0.002489794 CG8468 FBtr0087533|FBtr0087534|FBtr0087532 14229566|14229566|14229566 14230620|14230620|14230620 2R + 14230438 14230611 3'utr CG8468 FlyBase G15806.1 AAACACACACGGACCGCTACATACTCAGCACGATGAGTGCGTTTCGCGTTAACGTTTATCAACTACAATTACATTAAAACAGAATGAATGATTTATATTACATTTAAATTAATGAGTTTACATTGCATTGCATGCGACATAAGGTTACACTTCATAAACAATAAAGACGATTTC 52 14230582 0.980736815 22 48 342 0.923076923 1.77815125 0.061538462 0.192307692 0.353846154 52 5 0 60 2R:14230438-14230611 6 CG8468 FBtr0087532|FBtr0087533|FBtr0087534 14229566|14229566|14229566 14230620|14230620|14230620 TGCATT 6mer3-8 dme-miR-277-3p 2R + 14230503 14230625 3'utr CG8468 FlyBase G11995.1 CAATTACATTAAAACAGAATGAATGATTTATATTACATTTAAATTAATGAGTTTACATTGCATTGCATGCGACATAAGGTTACACTTCATAAACAATAAAGACGATTTCAATAATACGAACTA 22 14230531 0.888279803 17 22 126 1 1.491361694 0.258064516 0.272727273 0.483870968 22 0 0 31 2R:14230503-14230625 6 4 1145 FBgn0033913 3375.036667 105.6 161.63 0.001185172 0.037878788 0.024747881 -21 30 4.5 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 2R 14230734 14230739 - 2R_14230734_14230739_- 0.999861062 1 0.999930531 9.82E-05 Opa1 FBtr0339761|FBtr0339761 14230609|14230609 14232701|14232701 2R - 14230621 14230760 3'utr Opa1 FlyBase G23211.1 AAGACACAACACCCGAGGCGTTACTTATTTAACTTGATAGTTTAAGACCACATTTGAAATGTTTGTTCATAGTCACGCTTGAGCCCCTTAGTTAAGCATACTTTGTGCTCCGAAAGTAATAAACAAATAGATCGTTAGTT 52 14230732 0.985720637 20 48 393 0.93442623 1.45484486 0.229508197 0.134615385 0.262295082 52 3 1 57 2R:14230621-14230760 6 Opa1 FBtr0339759|FBtr0339759|FBtr0087574|FBtr0087574|FBtr0339760|FBtr0339760|FBtr0339761|FBtr0339761|FBtr0087573|FBtr0087573 14230609|14230609|14230609|14230609|14230609|14230609|14230609|14230609|14230609|14230609 14230773|14230773|14230773|14230773|14230773|14230773|14232701|14232701|14230773|14230773 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 2R - 14230712 14230759 3'utr Opa1 FlyBase G17597.2 AGACACAACACCCGAGGCGTTACTTATTTAACTTGATAGTTTAAGACC 12 14230740 0.980322849 4 11 64 1 1.278753601 0.263157895 0.5 0.684210526 12 0 0 19 2R:14230712-14230759 6 17.5 1146 FBgn0261276 1194.833333 44.64 68.46666667 0.014646394 0.39202509 0.255598832 -7 1 -3 0.1 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 2R 14231557 14231564 - 2R_14231557_14231564_- 0.674979954 0.67497497 0.674977462 3.54E-06 Opa1 FBtr0339761 14230609 14232701 2R - 14231544 14231586 5'utr Opa1 FlyBase G23215.1 TGCGACGAATTACCCACTGGCAGTACCTGACGCAGGATCAGCA 15 14231569 0.826937721 6 15 57 1 1.204119983 0.4375 0.066666667 0.125 15 0 0 16 2R:14231544-14231586 8 Opa1 FBtr0339761 14230609 14232701 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2R - 14231536 14231585 5'utr Opa1 FlyBase G17600.1 GCGACGAATTACCCACTGGCAGTACCTGACGCAGGATCAGCAGAAGAGGC 17 14231569 0.935518732 5 16 64 0.954545455 1.322219295 0.227272727 0.235294118 0.409090909 17 1 0 21 2R:14231536-14231585 8 16 1147 FBgn0261276 1194.833333 44.64 68.46666667 0.013390989 0.358422939 0.23369036 5 5 5 0.1 dme-miR-965-3p 8mer-A1 TACGCTTA 2R 14235883 14235890 - 2R_14235883_14235890_- 0.625361562 0.625363135 0.625362349 1.06E-06 CG8485 FBtr0087572|FBtr0087571|FBtr0087569 14235785|14235785|14235785 14236079|14236079|14236079 2R - 14235861 14235935 3'utr CG8485 FlyBase G23226.1 ATTTAAATTTAGTGGTAGCGTAATTGTTTTGTCTGTCGTCGTCATTACGCTTAAATTATTCTAAATATATTAATT 127 14235891 0.837384015 5 123 1266 0.979166667 1.672097858 0.138888889 0.134920635 0.243055556 126 1 2 141 2R:14235861-14235935 8 CG8485 FBtr0087569|FBtr0087572|FBtr0087571 14235785|14235785|14235785 14236079|14236079|14236079 TACGCTTA 8mer-A1 dme-miR-965-3p 2R - 14235866 14235913 3'utr CG8485 FlyBase G17610.1 ATTGTTTTGTCTGTCGTCGTCATTACGCTTAAATTATTCTAAATATAT 59 14235891 0.81672171 5 57 565 0.969387755 1.375663614 0.142857143 0.338983051 0.602040816 59 0 3 95 2R:14235866-14235913 8 90.5 1148 FBgn0033915 1584.563333 63.64333333 98.23 0.057113527 1.421987116 0.921307136 1 1 1 0.1 dme-miR-282-5p 7mer-A1 GAGGCTA 2R 14243425 14243431 + 2R_14243425_14243431_+ 0.823279898 0.82334952 0.823314709 4.92E-05 CG8494 FBtr0087535 14243257 14243655 2R + 14243392 14243444 3'utr CG8494 FlyBase G15814.1 AGTAGTTTTATACCTCAGTGTTTTGTTGGGGTGGAGGCTATATAAACTATGTA 23 14243423 0.981281692 5 23 167 1 1.431363764 0.074074074 0.086956522 0.222222222 23 0 0 27 2R:14243392-14243444 7 CG8494 FBtr0087535 14243257 14243655 GAGGCTA 7mer-A1 dme-miR-282-5p 2R + 14243401 14243439 3'utr CG8494 FlyBase G12004.1 ATACCTCAGTGTTTTGTTGGGGTGGAGGCTATATAAACT 14 14243423 0.950742975 4 14 85 1 1.278753601 0.105263158 0.357142857 0.526315789 14 0 0 19 2R:14243401-14243439 7 17.5 1149 FBgn0033916 369.3366667 13.09333333 20.11666667 0.047382244 1.336558045 0.869925435 2 2 2 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 2R 14252662 14252667 - 2R_14252662_14252667_- 0.999933658 0.999350996 0.999642327 0.000412031 Hsc70-5 FBtr0339969|FBtr0087568 14252596|14252596 14253189|14253189 2R - 14252614 14252737 3'utr Hsc70-5 FlyBase G23238.1 ATAAGCAGATGCTCATTTGGAGGTTTAAATTTAAGATAAATTGTATGTTGGTTTCCAGTGGACAACCAAATTGACTGGGTAATATGCAATTAAATTTAAACAAATCGATGTAAACTTAAAATAA 76 14252667 0.978910554 17 68 442 0.915789474 1.094421213 0.252631579 0.210526316 0.368421053 76 2 6 87 2R:14252614-14252737 6 Hsc70-5 FBtr0087568|FBtr0339969 14252596|14252596 14253189|14253189 TTGACT 6mer3-8 dme-miR-1012-3p 2R - 14252620 14252694 3'utr Hsc70-5 FlyBase G17618.1 TATGTTGGTTTCCAGTGGACAACCAAATTGACTGGGTAATATGCAATTAAATTTAAACAAATCGATGTAAACTTA 63 14252667 0.957973607 11 58 356 0.93902439 1.40936947 0.463414634 0.26984127 0.43902439 63 3 2 77 2R:14252620-14252694 6 56 1150 FBgn0001220 2208.986667 96.32 148.0166667 0.02535099 0.581395349 0.378335773 0 0 0 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 2R 14252798 14252804 - 2R_14252798_14252804_- 0.777978651 0.77590129 0.776939971 0.001468944 Hsc70-5 FBtr0339969|FBtr0087568 14252596|14252596 14253189|14253189 2R - 14252747 14252926 3'utr Hsc70-5 FlyBase G23238.2 TATTGTTTATTATGCAATCAATCGATTTTCTTTCTCCCTTACTTAAAACACGTGGTCACCGTTGTGTTGTGTTCCTGTAAGATTTTGATTATTTTTACGTATCATCTAAACTAGCTGTAGTTGTACAAAAACGAGCACAGCACAAAAATTGAATTCGAATGGCGGCCACGGCGTTCTAGA 91 14252806 0.99353246 22 79 559 0.894230769 1.123384909 0.201923077 0.131868132 0.240384615 91 5 6 93 2R:14252747-14252926 7 Hsc70-5 FBtr0087568|FBtr0339969 14252596|14252596 14253189|14253189 GTACAAA 7mer-A1 dme-miR-305-5p 2R - 14252744 14252819 3'utr Hsc70-5 FlyBase G17619.2 AAACTAGCTGTAGTTGTACAAAAACGAGCACAGCACAAAAATTGAATTCGAATGGCGGCCACGGCGTTCTAGACGC 28 14252806 0.971750105 5 24 123 0.9 0.954242509 0.225 0.25 0.475 28 1 3 36 2R:14252744-14252819 7 40 1151 FBgn0001220 2208.986667 96.32 148.0166667 0.01810785 0.415282392 0.270239838 2 2 2 0.1 dme-miR-2a-2-5p 7mer-A1 GATGAGA 2R 14252992 14252998 - 2R_14252992_14252998_- 0.782893952 0.782785623 0.782839788 7.67E-05 Hsc70-5 FBtr0339969|FBtr0087568 14252596|14252596 14253189|14253189 2R - 14252973 14253149 3'utr Hsc70-5 FlyBase G23239.1 ATTTAATAATAACCGCTTCTGGATTTCGATTAAGTTCTACGTTAAACACAAACACTTCATATTCCTTTATTGAATCATGAATCACGCAAAGCCACAAGCATTTACCCAAAATGTGAAGTAAACTATCCGATGCGATTAGGTCAAATCAGACGATGAGACTTCCAAGTAAACAGACGA 75 14252996 0.972880971 17 73 440 0.978947368 1.968482949 0.094736842 0.2 0.368421053 75 2 0 93 2R:14252973-14253149 7 Hsc70-5 FBtr0087568|FBtr0339969 14252596|14252596 14253189|14253189 GATGAGA 7mer-A1 dme-miR-2a-2-5p 2R - 14252981 14253019 3'utr Hsc70-5 FlyBase G17621.1 TGCGATTAGGTCAAATCAGACGATGAGACTTCCAAGTAA 31 14252996 0.949659879 5 28 110 0.975609756 1.602059991 0.146341463 0.290322581 0.463414634 31 1 0 40 2R:14252981-14253019 7 26.5 1152 FBgn0001220 2208.986667 96.32 148.0166667 0.011996451 0.275124585 0.179033893 -2 -2 -2 0.1 dme-miR-277-3p 6mer3-8 TGCATT 2R 14355447 14355452 + 2R_14355447_14355452_+ 0.822917495 0.999215842 0.911066669 0.124661723 CG8613 FBtr0087546 14355267 14355674 2R + 14355430 14355459 3'utr CG8613 FlyBase G15846.1 TGTTAAGTCTGAGAGACTGCATTGCTCCCT 7 14355451 0.620954109 4 6 39 0.857142857 0.77815125 0.142857143 0 0 7 1 0 6 2R:14355430-14355459 6 CG8613 FBtr0087546 14355267 14355674 TGCATT 6mer3-8 dme-miR-277-3p 2R + 14355430 14355460 3'utr CG8613 FlyBase G12028.1 TGTTAAGTCTGAGAGACTGCATTGCTCCCTA 6 14355451 0.729137763 3 6 30 1 0.77815125 0 0 0 6 0 0 6 2R:14355430-14355460 6 6.5 1153 FBgn0033924 155.2666667 6.23 9.476666667 0.041863461 1.043338684 0.685895181 -4 -4 -4 0.1 dme-miR-14-3p 8mer-A1 AAGACTGA 2R 14357959 14357966 - 2R_14357959_14357966_- 0.643565469 0.643565469 0.643565469 0 Arc1 FBtr0087560 14357925 14359435 2R - 14357950 14358001 3'utr Arc1 FlyBase G23277.1 CGTGGAACTGCTAAAAATATAAAACTGTAAAACTAAAGACTGAAACTAGAAA 252 14357968 0.765409429 9 222 851 0.886363636 1.290034611 0.090909091 0.174603175 0.324675325 252 22 13 273 2R:14357950-14358001 8 Arc1 FBtr0087560 14357925 14359435 AAGACTGA 8mer-A1 dme-miR-14-3p 2R - 14357950 14358031 3'utr Arc1 FlyBase G17650.1 TGGGGGCCTATGGAAGACCACAAGTGGTTGCGTGGAACTGCTAAAAATATAAAACTGTAAAACTAAAGACTGAAACTAGAAA 228 14357968 0.742143498 13 192 822 0.852090032 1.043034632 0.118971061 0.285087719 0.475884244 228 23 23 265 2R:14357950-14358031 8 219 1154 FBgn0033926 17202.14 891.9533333 1379.15 0.012730974 0.24552854 0.15879346 2 2 2 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 2R 14413758 14413763 + 2R_14413758_14413763_+ 0.998354903 0.999999067 0.999176985 0.001162625 Sin1 FBtr0087487 14413615 14413851 2R + 14413739 14413832 3'utr Sin1 FlyBase G15867.1 TTAGTTGCTAACTAAAGATTGTGTTACACATGTTTGCCTAGCCTGTAAGTATTTATTGAACTCACCCAACTACGAAGCCTGGTCCTGAAAATAA 26 14413757 0.852376367 9 25 173 1 1.477121255 0.066666667 0.153846154 0.266666667 26 0 0 30 2R:14413739-14413832 6 Sin1 FBtr0087487 14413615 14413851 TGTGTT 6mer3-8 dme-miR-317-3p 2R + 14413730 14413831 3'utr Sin1 FlyBase G12045.1 TAAGTTGTATTAGTTGCTAACTAAAGATTGTGTTACACATGTTTGCCTAGCCTGTAAGTATTTATTGAACTCACCCAACTACGAAGCCTGGTCCTGAAAATA 24 14413757 0.934973957 12 20 172 0.766666667 1.06069784 0.066666667 0.166666667 0.333333333 24 6 1 23 2R:14413730-14413831 6 11 1155 FBgn0033935 145.3333333 8.676666667 13.25333333 0.075688073 1.26776796 0.829979879 1 1 1 0.1 dme-bantam-3p 6mer3-8 TGATCT 2R 14497088 14497093 + 2R_14497088_14497093_+ 0.999318615 0.998643793 0.998981204 0.000477156 L FBtr0087492 14496762 14497312 2R + 14497065 14497188 3'utr L FlyBase G15880.2 AAGTTTTCTTTCATTTTTTCGGATGATCTTCGATTGGAAATGTGTATTTTCTTCGTTCGACGAGTGTACGCCTATCATCGGCTGTTGCACATTGAGTTAACTAACTGATACTGATACTGATGAT 399 14497088 0.860283517 29 392 4025 0.985355649 2.195899652 0.462343096 0.155388471 0.294979079 399 5 2 471 2R:14497065-14497188 6 L FBtr0087492 14496762 14497312 TGATCT 6mer3-8 dme-bantam-3p 2R + 14497066 14497114 3'utr L FlyBase G12059.2 AGTTTTCTTTCATTTTTTCGGATGATCTTCGATTGGAAATGTGTATTTT 271 14497088 0.868710227 8 267 2754 0.984693878 2.586587305 0.538265306 0.346863469 0.548469388 271 6 0 386 2R:14497066-14497114 6 310.5 1156 FBgn0001332 330.9966667 15.39666667 23.77 0.938075912 20.16670275 13.06268406 0 0 0 0.1 dme-miR-2a-2-5p 7mer-m1 GATGAGG 2R 14511347 14511353 + 2R_14511347_14511353_+ 0.702105734 0.655739977 0.678922855 0.032785501 Asx FBtr0332930 14510482 14512493 2R + 14511312 14511391 3'utr Asx FlyBase G15903.1 CGGTGCGGCCAAGCTGTGTGTCGCCTGTGTGATTAGATGAGGTGGATAACGTTTTGTAGTTACTTAGAGACCCGTACTTT 16 14511345 0.982184086 8 16 120 1 1.278753601 0.578947368 0.1875 0.315789474 16 0 0 19 2R:14511312-14511391 7 Asx FBtr0332930 14510482 14512493 GATGAGG 7mer-m1 dme-miR-2a-2-5p 2R + 14511322 14511396 3'utr Asx FlyBase G12078.1 AAGCTGTGTGTCGCCTGTGTGATTAGATGAGGTGGATAACGTTTTGTAGTTACTTAGAGACCCGTACTTTTAGTC 18 14511345 0.984486375 7 17 132 0.965517241 1.447158031 0.275862069 0.388888889 0.620689655 18 1 0 28 2R:14511322-14511396 7 12.5 1157 FBgn0261823 1306.773333 24.71666667 37.93 0.009565546 0.505731625 0.329554442 2 2 2 0.1 dme-miR-282-5p 7mer-m8 AGAGGCT 2R 14511506 14511512 + 2R_14511506_14511512_+ 0.630759885 0.604588504 0.617674194 0.018505974 Asx FBtr0087493|FBtr0332929|FBtr0332930 14511350|14511350|14510482 14512493|14512493|14512493 2R + 14511411 14511529 3'utr Asx FlyBase G15904.1 GGTACCAACCAAATGTTTAAATTGTGAACTATAGCAATCAAAGAGAAATAGCAAAAACCAAGTGTACAACAAACAAATTAAAACAATGGACGTGCAGAGGCTTACGCACAGACACAGCA 46 14511513 0.91222081 8 43 143 0.964912281 1.740362689 0.157894737 0.152173913 0.315789474 46 2 0 55 2R:14511411-14511529 7 Asx FBtr0332929|FBtr0332930|FBtr0087493 14511350|14510482|14511350 14512493|14512493|14512493 AGAGGCT 7mer-m8 dme-miR-282-5p 2R + 14511485 14511529 3'utr Asx FlyBase G12080.1 AAATTAAAACAATGGACGTGCAGAGGCTTACGCACAGACACAGCA 31 14511513 0.875117946 2 30 81 0.978723404 1.662757832 0.191489362 0.322580645 0.553191489 31 1 0 46 2R:14511485-14511529 7 29.5 1158 FBgn0261823 1306.773333 24.71666667 37.93 0.022574688 1.193526635 0.777748484 -7 -7 -7 0.1 dme-miR-965-3p 6mer2-7 ACGCTT 2R 14512072 14512077 + 2R_14512072_14512077_+ 0.814665478 0.669067193 0.741866336 0.102953545 Asx FBtr0087493|FBtr0332929|FBtr0332930 14511350|14511350|14510482 14512493|14512493|14512493 2R + 14512052 14512097 3'utr Asx FlyBase G15909.1 ATTCATAATGTATTTTGAAAACGCTTTGGCCCAGCGCTTAGGCTAT 35 14512078 0.852684578 3 35 223 1 1.612783857 0.317073171 0.142857143 0.268292683 35 0 0 41 2R:14512052-14512097 6 Asx FBtr0332929|FBtr0332930|FBtr0087493 14511350|14510482|14511350 14512493|14512493|14512493 ACGCTT 6mer2-7 dme-miR-965-3p 2R + 14512052 14512098 3'utr Asx FlyBase G12082.1 ATTCATAATGTATTTTGAAAACGCTTTGGCCCAGCGCTTAGGCTATA 17 14512078 0.895086528 3 17 112 1 1.342422681 0.272727273 0.235294118 0.409090909 17 0 0 22 2R:14512052-14512098 6 24 1159 FBgn0261823 1306.773333 24.71666667 37.93 0.018365848 0.97100472 0.632744529 -6 -6 -6 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2R 14512142 14512147 + 2R_14512142_14512147_+ 0.999957558 0.999997081 0.99997732 2.79E-05 Asx FBtr0087493|FBtr0332929|FBtr0332930 14511350|14511350|14510482 14512493|14512493|14512493 2R + 14512109 14512188 3'utr Asx FlyBase G15910.1 CTTTAAGTTTAGTATTATCCACCCAAACGATCTAAGACTCTTCATGCCCACATTTCTTTAGCATGTAGCGTATAAACGTA 29 14512149 0.751203212 9 27 182 0.970588235 1.51851394 0 0.172413793 0.294117647 29 1 0 33 2R:14512109-14512188 6 Asx FBtr0332929|FBtr0332930|FBtr0087493 14511350|14510482|14511350 14512493|14512493|14512493 AAGACT 6mer3-8 dme-miR-14-3p 2R + 14512109 14512180 3'utr Asx FlyBase G12083.1 CTTTAAGTTTAGTATTATCCACCCAAACGATCTAAGACTCTTCATGCCCACATTTCTTTAGCATGTAGCGTA 9 14512141 0.972481451 5 8 58 0.933333333 1.146128036 0.2 0.444444444 0.666666667 9 1 0 14 2R:14512109-14512180 6 13.5 1160 FBgn0261823 1306.773333 24.71666667 37.93 0.010330789 0.546190155 0.355918798 -7 1 -3 0.1 dme-miR-190-5p 6mer3-8 ACATAT 2R 14584274 14584279 + 2R_14584274_14584279_+ 1 1 1 0 ttv FBtr0087495|FBtr0333165|FBtr0333164 14584225|14584225|14584225 14585321|14585321|14587917 2R + 14584247 14584282 3'utr ttv FlyBase G15921.1 TAGCTACAAGCGTTAATAGTACTGAATACATATACA 12 14584263 0.679981291 6 10 69 0.857142857 1.079181246 0 0.166666667 0.285714286 12 2 0 12 2R:14584247-14584282 6 ttv FBtr0333164|FBtr0087495|FBtr0333165 14584225|14584225|14584225 14587917|14585321|14585321 ACATAT 6mer3-8 dme-miR-190-5p 2R + 14584247 14584283 3'utr ttv FlyBase G12092.1 TAGCTACAAGCGTTAATAGTACTGAATACATATACAC 9 14584265 0.948368118 4 8 58 0.933333333 1.146128036 0 0.555555556 0.733333333 9 1 0 14 2R:14584247-14584283 6 9.5 1161 FBgn0265974 763.1366667 22.67 34.72 0.012448622 0.419056021 0.273617512 11 9 10 0.1 dme-miR-13b-2-5p 8mer-m1 TTTGACGC 2R 14584400 14584407 + 2R_14584400_14584407_+ 0.618174508 0.618174508 0.618174508 0 ttv FBtr0087495|FBtr0333165|FBtr0333164 14584225|14584225|14584225 14585321|14585321|14587917 2R + 14584378 14584427 3'utr ttv FlyBase G15922.1 ATGTTTAGATGAAATGCTGTTTTTTGACGCTGGCCAAGCGATGCAAGAAC 12 14584401 0.727431545 6 11 89 0.933333333 1.146128036 0.4 0.166666667 0.333333333 12 1 0 14 2R:14584378-14584427 8 ttv FBtr0333164|FBtr0087495|FBtr0333165 14584225|14584225|14584225 14587917|14585321|14585321 TTTGACGC 8mer-m1 dme-miR-13b-2-5p 2R + 14584380 14584431 3'utr ttv FlyBase G12093.1 GTTTAGATGAAATGCTGTTTTTTGACGCTGGCCAAGCGATGCAAGAACTATG 12 14584392 0.974310119 6 12 89 1 1.255272505 0.611111111 0.25 0.5 12 0 0 18 2R:14584380-14584431 8 11.5 1162 FBgn0265974 763.1366667 22.67 34.72 0.015069385 0.507278341 0.331221198 -1 8 3.5 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 2R 14584581 14584586 + 2R_14584581_14584586_+ 0.999867208 0.990828897 0.995348052 0.006391043 ttv FBtr0087495|FBtr0333165|FBtr0333164 14584225|14584225|14584225 14585321|14585321|14587917 2R + 14584554 14584613 3'utr ttv FlyBase G15923.1 ATATATATATAGTCCTTAAATACGATTATGTGAATTAGCCTAGTTAACTGCAAGCGAAGC 35 14584588 0.949189658 4 35 267 1 1.591064607 0.153846154 0.114285714 0.205128205 35 0 0 39 2R:14584554-14584613 6 ttv FBtr0333164|FBtr0087495|FBtr0333165 14584225|14584225|14584225 14587917|14585321|14585321 ATGTGA 6mer3-8 dme-miR-1003-3p 2R + 14584568 14584609 3'utr ttv FlyBase G12095.1 CTTAAATACGATTATGTGAATTAGCCTAGTTAACTGCAAGCG 32 14584588 0.814204783 2 32 251 1 1.69019608 0.204081633 0.375 0.591836735 32 0 0 49 2R:14584568-14584609 6 32.5 1163 FBgn0265974 763.1366667 22.67 34.72 0.042587392 1.433612704 0.936059908 -7 -7 -7 0.1 dme-miR-282-5p 6mer2-7 GAGGCT 2R 14584872 14584877 + 2R_14584872_14584877_+ 0.995136049 0.993957236 0.994546642 0.000833537 ttv FBtr0087495|FBtr0333165|FBtr0333164 14584225|14584225|14584225 14585321|14585321|14587917 2R + 14584848 14584887 3'utr ttv FlyBase G15926.1 AATTTCAGTTTTAAATTCCAACTTGAGGCTCCTCGAATTC 23 14584871 0.845713383 2 22 152 0.925925926 0.920818754 0.185185185 0.173913043 0.296296296 23 0 2 25 2R:14584848-14584887 6 ttv FBtr0333164|FBtr0087495|FBtr0333165 14584225|14584225|14584225 14587917|14585321|14585321 GAGGCT 6mer2-7 dme-miR-282-5p 2R + 14584828 14584886 3'utr ttv FlyBase G12097.1 GCGCAAGGCACAGTCGTCTCAATTTCAGTTTTAAATTCCAACTTGAGGCTCCTCGAATT 19 14584871 0.973376014 4 19 114 1 1.491361694 0.096774194 0.473684211 0.677419355 19 0 0 31 2R:14584828-14584886 6 19.5 1164 FBgn0265974 763.1366667 22.67 34.72 0.025552435 0.860167622 0.561635945 1 1 1 0.1 dme-miR-980-5p 7mer-A1 AAAAACA 2R 14584894 14584900 + 2R_14584894_14584900_+ 0.765227567 0.767331321 0.766279444 0.001487541 ttv FBtr0087495|FBtr0333165|FBtr0333164 14584225|14584225|14584225 14585321|14585321|14587917 2R + 14584893 14584924 3'utr ttv FlyBase G15927.1 AAAAAACACATCGACTGTATCTTTTGATTATC 9 14584910 0.849963827 3 7 43 0.909090909 1 0 0.222222222 0.363636364 9 1 0 10 2R:14584893-14584924 7 ttv FBtr0333164|FBtr0087495|FBtr0333165 14584225|14584225|14584225 14587917|14585321|14585321 AAAAACA 7mer-A1 dme-miR-980-5p 2R + 14584887 14584921 3'utr ttv FlyBase G12098.1 CCGTATAAAAAACACATCGACTGTATCTTTTGATT 5 14584910 0.982313188 4 5 33 1 1 0.4 0.6 0.8 5 0 0 10 2R:14584887-14584921 7 6 1165 FBgn0265974 763.1366667 22.67 34.72 0.007862288 0.264666961 0.17281106 -16 -16 -16 0.1 dme-miR-1002-5p 6mer3-8 CTACTT 2R 14602397 14602402 - 2R_14602397_14602402_- 0.81336951 0.810519825 0.811944668 0.002015042 tra2 FBtr0089620|FBtr0089616|FBtr0089619|FBtr0089617|FBtr0089621|FBtr0089618|FBtr0089615 14602002|14602002|14602002|14602002|14602002|14602002|14602002 14602419|14602419|14602419|14602419|14602419|14602893|14602419 2R - 14602368 14602421 3'utr tra2 FlyBase G23324.1 AAAGCGCCTGGGGAGGAGGCTACTTCATTAACTCGTGCTCCTAAGTTCGCCCAA 17 14602394 0.713278414 4 15 99 0.944444444 1.230448921 0.055555556 0.058823529 0.111111111 17 1 0 17 2R:14602368-14602421 6 tra2 FBtr0089621|FBtr0089618|FBtr0089615|FBtr0089620|FBtr0089616|FBtr0089619|FBtr0089617 14602002|14602002|14602002|14602002|14602002|14602002|14602002 14602419|14602893|14602419|14602419|14602419|14602419|14602419 CTACTT 6mer3-8 dme-miR-1002-5p 2R - 14602369 14602422 3'utr tra2 FlyBase G17677.1 TAAAGCGCCTGGGGAGGAGGCTACTTCATTAACTCGTGCTCCTAAGTTCGCCCA 10 14602395 0.741184385 4 8 58 0.933333333 1.146128036 0 0.4 0.6 10 1 0 14 2R:14602369-14602422 6 8 1166 FBgn0003742 307.7 25.64 38.94 0.02599935 0.31201248 0.205444273 -8 -7 -7.5 0.1 dme-miR-980-3p 7mer-A1 GCAGCTA 2R 14760435 14760441 - 2R_14760435_14760441_- 0.823349546 0.823349539 0.823349542 0 Spred FBtr0329880 14759644 14761759 2R - 14760416 14760470 3'utr Spred FlyBase G23385.1 GTTTTCAAAAAGTCAACAAACTCATATATGCAGCTATATATATATATAAAAATAA 62 14760443 0.846923084 4 58 513 0.943661972 1.826074803 0.028169014 0.080645161 0.197183099 62 4 0 67 2R:14760416-14760470 7 Spred FBtr0329880 14759644 14761759 GCAGCTA 7mer-A1 dme-miR-980-3p 2R - 14760415 14760464 3'utr Spred FlyBase G17721.1 AAAAAGTCAACAAACTCATATATGCAGCTATATATATATATAAAAATAAT 31 14760443 0.827300942 3 30 258 0.954545455 1.62324929 0 0.322580645 0.522727273 31 2 0 42 2R:14760415-14760464 7 46.5 1167 FBgn0020767 764.69 30.76 47.25 0.060808955 1.511703511 0.984126984 2 2 2 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2R 14760846 14760852 - 2R_14760846_14760852_- 0.808801776 0.808792308 0.808797042 6.72E-06 Spred FBtr0329880|FBtr0329880 14759644|14759644 14761759|14761759 2R - 14760833 14760872 3'utr Spred FlyBase G23386.1 TCGCTATGCTCGGCAATTGTTACTTAAATGTGCTTTAGTT 16 14760856 0.84422447 2 15 144 0.941176471 1.204119983 0.352941176 0.0625 0.117647059 16 1 0 16 2R:14760833-14760872 7 Spred FBtr0329880|FBtr0329880 14759644|14759644 14761759|14761759 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2R - 14760810 14760867 3'utr Spred FlyBase G17722.1 ATGCTCGGCAATTGTTACTTAAATGTGCTTTAGTTCAGAACTATGTACCCATTCGGTT 10 14760856 0.990263264 3 9 87 0.916666667 1.041392685 0.416666667 0.2 0.333333333 10 1 0 11 2R:14760810-14760867 7 12 1168 FBgn0020767 764.69 30.76 47.25 0.015692634 0.390117035 0.253968254 4 4 4 0.1 dme-miR-980-5p 6mer2-7 AAAAAC 2R 14761334 14761339 - 2R_14761334_14761339_- 1 0.999999945 0.999999972 7.07E-08 Spred FBtr0329880|FBtr0087468|FBtr0329879 14759644|14761154|14761154 14761759|14762038|14762038 2R - 14761320 14761356 3'utr Spred FlyBase G23388.1 CTTAATTATAGTTTTGTAAAAACGGGCTATTTGTTTT 5 14761343 0.96429907 3 5 47 1 0.84509804 0.428571429 0.2 0.428571429 5 0 0 7 2R:14761320-14761356 6 Spred FBtr0329879|FBtr0087468|FBtr0329880 14761154|14761154|14759644 14762038|14762038|14761759 AAAAAC 6mer2-7 dme-miR-980-5p 2R - 14761324 14761348 3'utr Spred FlyBase G17724.1 TAGTTTTGTAAAAACGGGCTATTTG 6 14761343 0.550193491 4 6 43 1 1 0.1 0.5 0.7 6 0 0 10 2R:14761324-14761348 6 5 1169 FBgn0020767 764.69 30.76 47.25 0.006538597 0.162548765 0.105820106 4 4 4 0.1 dme-miR-932-5p 6mer2-7 GAATTG 2R 14761449 14761454 - 2R_14761449_14761454_- 0.583167076 0.99986626 0.791516668 0.29465083 Spred FBtr0329880|FBtr0087468|FBtr0329879 14759644|14761154|14761154 14761759|14762038|14762038 2R - 14761436 14761516 3'utr Spred FlyBase G23389.1 AAATCAGTTTGCCAAAATGGGTCTGGGGTTCGATTTTAGTATCATTTCGGTATACTCCATTTGAATTGCCATAATTAATTG 12 14761448 0.934017643 9 11 114 0.916666667 1.041392685 0.166666667 0 0 12 1 0 11 2R:14761436-14761516 6 Spred FBtr0329879|FBtr0087468|FBtr0329880 14761154|14761154|14759644 14762038|14762038|14761759 GAATTG 6mer2-7 dme-miR-932-5p 2R - 14761421 14761473 3'utr Spred FlyBase G17725.1 ATTTCGGTATACTCCATTTGAATTGCCATAATTAATTGTATATACAAAAGAGC 5 14761456 0.980386288 4 5 38 1 0.84509804 0.142857143 0.4 0.571428571 5 0 0 7 2R:14761421-14761473 6 4.5 1170 FBgn0020767 764.69 30.76 47.25 0.005884738 0.146293888 0.095238095 -6 2 -2 0.1 dme-miR-1006-3p 6mer3-8 CGAATT 2R 14761980 14761985 - 2R_14761980_14761985_- 0.995711374 0.992801289 0.994256332 0.002057751 Spred FBtr0087468|FBtr0329879 14761154|14761154 14762038|14762038 2R - 14761923 14762003 3'utr Spred FlyBase G23392.1 TGACCCCAGGCCCAGAAGCGAATTCCACTACCACCACTCCGAGCAGAGCATAATGAACAGCGCCAAGCGTCCGTGGGGCGC 7 14761981 0.836299419 2 6 16 1 0.84509804 0.571428571 0 0 7 0 0 7 2R:14761923-14762003 6 Spred FBtr0329879|FBtr0087468 14761154|14761154 14762038|14762038 CGAATT 6mer3-8 dme-miR-1006-3p 2R - 14761930 14762014 3'utr Spred FlyBase G17726.1 CAGCACGATGATGACCCCAGGCCCAGAAGCGAATTCCACTACCACCACTCCGAGCAGAGCATAATGAACAGCGCCAAGCGTCCGT 10 14761981 0.949132267 6 9 16 1 1.113943352 0.384615385 0.2 0.384615385 10 0 0 13 2R:14761930-14762014 6 3.5 1171 FBgn0020767 764.69 30.76 47.25 0.004577018 0.113784135 0.074074074 -4 -4 -4 0.1 dme-miR-2535b-3p 6mer3-8 CCGTGA 2R 14846178 14846183 - 2R_14846178_14846183_- 0.999999979 1 0.999999989 0 CG10209 FBtr0329883|FBtr0087462 14846062|14846062 14846330|14846417 2R - 14846151 14846200 3'utr CG10209 FlyBase G23400.1 TTTGTAGTAAGTGGATGCCGTGATCCTCATGTAAATGTTCCCGTGGCAAT 26 14846180 0.809774592 4 26 159 1 1.447158031 0.25 0.038461538 0.107142857 26 0 0 28 2R:14846151-14846200 6 CG10209 FBtr0087462|FBtr0329883 14846062|14846062 14846417|14846330 CCGTGA 6mer3-8 dme-miR-2535b-3p 2R - 14846103 14846200 3'utr CG10209 FlyBase G17730.1 TTTGTAGTAAGTGGATGCCGTGATCCTCATGTAAATGTTCCCGTGGCAATAACAGCGTAGCTCAACTGTGACTCAAGTTCTCAATAGATCGCGACGCA 26 14846181 0.980763921 7 24 166 0.953488372 1.612783857 0.162790698 0.538461538 0.720930233 26 2 0 41 2R:14846103-14846200 6 20.5 1172 FBgn0033971 206.33 12.39 18.95 0.099355402 1.654560129 1.081794195 -3 -2 -2.5 0.1 dme-miR-970-3p 7mer-m8 TCTTATG 2R 14846291 14846297 - 2R_14846291_14846297_- 0.657943214 0.644278432 0.651110823 0.009662473 CG10209 FBtr0329883|FBtr0087462 14846062|14846062 14846330|14846417 2R - 14846295 14846322 3'utr CG10209 FlyBase G23402.1 TTAGACGGCAATTCGTAGGTCTCATTCT 8 14846298 0.679150903 4 8 54 1 0.903089987 0.125 0 0 8 0 0 8 2R:14846295-14846322 2 CG10209 FBtr0087462|FBtr0329883 14846062|14846062 14846417|14846330 TCTTATG 7mer-m8 dme-miR-970-3p 2R - 14846295 14846327 3'utr CG10209 FlyBase G17731.1 TCGATTTAGACGGCAATTCGTAGGTCTCATTCT 16 14846298 0.622991944 6 16 112 1 1.342422681 0.227272727 0.3125 0.5 16 0 0 22 2R:14846295-14846327 2 11 1173 FBgn0033971 206.33 12.39 18.95 0.053312654 0.887812752 0.580474934 1 1 1 0.1 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2R 14857343 14857350 + 2R_14857343_14857350_+ 0.631136635 0.631136612 0.631136624 0 HPS1 FBtr0087449 14857301 14857502 2R + 14857330 14857369 3'utr HPS1 FlyBase G15977.1 TTATAACATGATTTCTAGTCAATTTTCGAGACTCCTAGGC 66 14857342 0.719346163 5 64 592 0.988095238 1.919078092 0 0.196969697 0.369047619 66 1 0 83 2R:14857330-14857369 8 HPS1 FBtr0087449 14857301 14857502 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R + 14857330 14857372 3'utr HPS1 FlyBase G12133.1 TTATAACATGATTTCTAGTCAATTTTCGAGACTCCTAGGCGAG 50 14857342 0.73809567 6 48 461 0.985915493 1.84509804 0.056338028 0.32 0.521126761 50 1 0 70 2R:14857330-14857372 8 57 1174 FBgn0033973 78.66666667 4.6 7.043333333 0.724576271 12.39130435 8.09275911 1 1 1 0.1 dme-miR-8-3p 8mer-A1 CAGTATTA 2R 14867118 14867125 - 2R_14867118_14867125_- 0.671595314 0.671605894 0.671600604 7.50E-06 Inr-a FBtr0301513 14866611 14867304 2R - 14867102 14867147 3'utr Inr-a FlyBase G23449.1 TGGTTATAAAAGCGACCATTGCCAGTATTACTTACTGATCAACATT 49 14867128 0.836142673 4 47 311 0.981132075 1.716003344 0.150943396 0.081632653 0.150943396 49 1 0 52 2R:14867102-14867147 8 Inr-a FBtr0301513 14866611 14867304 CAGTATTA 8mer-A1 dme-miR-8-3p 2R - 14867082 14867151 3'utr Inr-a FlyBase G17766.1 GAGATGGTTATAAAAGCGACCATTGCCAGTATTACTTACTGATCAACATTATTGACAAAGATGTCTATAA 47 14867128 0.975054819 2 47 300 1 1.897627091 0.202531646 0.489361702 0.696202532 47 0 0 79 2R:14867082-14867151 8 46 1175 FBgn0264962 1522.043333 60.58 92.41666667 0.03022253 0.75932651 0.497745717 3 3 3 0.1 dme-miR-184-5p 7mer-m8 TGATAAG 2R 14867260 14867266 - 2R_14867260_14867266_- 0.31710328 0.379769186 0.348436233 0.044311483 Inr-a FBtr0301513 14866611 14867304 2R - 14867175 14867375 stop_codon Inr-a FlyBase G23450.1 TCAACCAGAATGGCGGCACTCGATGGCTTAGGTTGGTGGAAGGGCGGGTTATTGGGACCGTATGTGGTTGACAAGTGGAAATCTTCTGCTCAACTCTAACCGAAGTCTGTGATAAGTACAATTGTGATACCAAAGTGGCGTTCCCAACAATGGAATGTGTTAAACTATAGATTTTGCTTGAATTCTGATAAATATCATATT 139 14867270 0.979531721 25 131 906 0.955307263 1.630936119 0.094972067 0.223021583 0.396648045 139 5 3 171 2R:14867175-14867375 7 Inr-a FBtr0301513 14866611 14867304 TGATAAG 7mer-m8 dme-miR-184-5p 2R - 14867196 14867324 stop_codon Inr-a FlyBase G17767.1 TTGGGACCGTATGTGGTTGACAAGTGGAAATCTTCTGCTCAACTCTAACCGAAGTCTGTGATAAGTACAATTGTGATACCAAAGTGGCGTTCCCAACAATGGAATGTGTTAAACTATAGATTTTGCTTG 110 14867270 0.85805092 18 98 710 0.887573964 1.477121255 0.147928994 0.409090909 0.615384615 110 15 4 150 2R:14867196-14867324 7 86 1176 FBgn0264962 1522.043333 60.58 92.41666667 0.05650299 1.419610432 0.930568079 4 4 4 0.1 dme-miR-1007-3p 6mer3-8 TGAGCT 2R 14901679 14901684 - 2R_14901679_14901684_- 0.803541666 0.909528779 0.856535223 0.074944197 CG10249 FBtr0303758|FBtr0112929|FBtr0087429|FBtr0303757|FBtr0332856|FBtr0087430|FBtr0301334|FBtr0303756|FBtr0087431 14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473 14901972|14901972|14901972|14901972|14901972|14901972|14902362|14901972|14901972 2R - 14901652 14901731 3'utr CG10249 FlyBase G23465.1 TGAGACACATCGATCAACTAATGCAATTAAGTACTACTGCACAGGCCTGAGCTACCGATCTTAAAGTAGCCGACAAACCA 32 14901694 0.952747833 9 29 153 0.918918919 1.230448921 0.135135135 0.15625 0.27027027 32 2 1 34 2R:14901652-14901731 6 CG10249 FBtr0303757|FBtr0087429|FBtr0112929|FBtr0303758|FBtr0087431|FBtr0303756|FBtr0087430|FBtr0301334|FBtr0332856 14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473 14901972|14901972|14901972|14901972|14901972|14901972|14901972|14902362|14901972 TGAGCT 6mer3-8 dme-miR-1007-3p 2R - 14901658 14901749 3'utr CG10249 FlyBase G17780.1 AACTCTGTGTAATCATTCTGAGACACATCGATCAACTAATGCAATTAAGTACTACTGCACAGGCCTGAGCTACCGATCTTAAAGTAGCCGAC 22 14901680 0.935827302 11 18 99 0.9375 1.176091259 0.1875 0.363636364 0.5625 22 1 1 30 2R:14901658-14901749 6 13.5 1177 FBgn0027596 1054.266667 34.76666667 52.75333333 0.012805109 0.388302972 0.255907999 10 -4 3 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT 2R 14901846 14901852 - 2R_14901846_14901852_- 0.658913733 0.656368834 0.657641283 0.001799516 CG10249 FBtr0303758|FBtr0112929|FBtr0087429|FBtr0303757|FBtr0332856|FBtr0087430|FBtr0301334|FBtr0303756|FBtr0087431 14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473 14901972|14901972|14901972|14901972|14901972|14901972|14902362|14901972|14901972 2R - 14901805 14901924 3'utr CG10249 FlyBase G23467.1 AAGATTTAAATTAGCATTTCGTAGAGCTGCTCAGAATACATTCCATACCGCCATACTGCGGAAAGGCACAAGGGCAGCTTACACTTTTCATATGTATATTGTATAACTAGAATTCGTTTG 47 14901845 0.787507029 17 42 337 0.927272727 1.707570176 0.145454545 0.14893617 0.272727273 47 4 0 51 2R:14901805-14901924 7 CG10249 FBtr0303757|FBtr0087429|FBtr0112929|FBtr0303758|FBtr0087431|FBtr0303756|FBtr0087430|FBtr0301334|FBtr0332856 14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473 14901972|14901972|14901972|14901972|14901972|14901972|14901972|14902362|14901972 GGCAGCT 7mer-m8 dme-miR-980-3p 2R - 14901812 14901979 stop_codon CG10249 FlyBase G17781.1 GCAGTAAAGCCATTTCGTATTAGCGGCCAAATCGACGAACAAACAGCTAGTGACTAAGATTTAAATTAGCATTTCGTAGAGCTGCTCAGAATACATTCCATACCGCCATACTGCGGAAAGGCACAAGGGCAGCTTACACTTTTCATATGTATATTGTATAACTAGAAT 41 14901845 0.976038614 14 36 208 0.90625 1.462397998 0.125 0.43902439 0.640625 41 5 1 58 2R:14901812-14901979 7 15.5 1178 FBgn0027596 1054.266667 34.76666667 52.75333333 0.014702163 0.445829338 0.293820296 -7 -7 -7 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 2R 14939139 14939145 + 2R_14939139_14939145_+ 0.62014144 0.620193138 0.620167289 3.66E-05 Lap1 FBtr0087407|FBtr0303759 14939080|14939080 14940722|14939959 2R + 14939055 14939147 stop_codon Lap1 FlyBase G16002.1 ATGAACATAATGTTGTCGAGAAAATGATGGACCATCTATTTACCGACCTAAGCCGATTCCCATCCCGAGACCGAAGACTTTTTGTGCATTTTT 91 14939135 0.968072193 13 89 470 0.990909091 2.037426498 0.472727273 0.175824176 0.318181818 91 1 0 109 2R:14939055-14939147 7 Lap1 FBtr0087407|FBtr0303759 14939080|14939080 14940722|14939959 TGCATTT 7mer-m8 dme-miR-277-3p 2R + 14939095 14939152 3'utr Lap1 FlyBase G12147.1 TACCGACCTAAGCCGATTCCCATCCCGAGACCGAAGACTTTTTGTGCATTTTTCTAAC 66 14939135 0.701910176 8 59 330 0.914893617 1.457377197 0.478723404 0.318181818 0.521276596 66 6 2 86 2R:14939095-14939152 7 38.5 1179 FBgn0033984 772.6433333 22.73333333 35.04666667 0.049828942 1.693548387 1.098535286 4 4 4 0.1 dme-miR-8-3p 8mer-A1 CAGTATTA 2R 14940040 14940047 + 2R_14940040_14940047_+ 0.539981183 0.654521545 0.597251364 0.080992223 Lap1 FBtr0087407 14939080 14940722 2R + 14939983 14940059 3'utr Lap1 FlyBase G16005.1 ATTTTCAATGGTGAACTGTTAGCACAAACTGAATTCTCACGCTATTGGCATTGTGATCAGTATTATTATTTATCTGG 65 14940038 0.861331328 14 63 673 0.974025974 1.875061263 0.12987013 0.184615385 0.311688312 65 2 0 75 2R:14939983-14940059 8 Lap1 FBtr0087407 14939080 14940722 CAGTATTA 8mer-A1 dme-miR-8-3p 2R + 14939952 14940061 3'utr Lap1 FlyBase G12152.1 TATTGTCCAATCGATCGAAGTGTCAAACATTATTTTCAATGGTGAACTGTTAGCACAAACTGAATTCTCACGCTATTGGCATTGTGATCAGTATTATTATTTATCTGGTT 41 14940038 0.990487838 13 39 405 0.951612903 1.293730757 0.161290323 0.414634146 0.612903226 41 1 2 59 2R:14939952-14940061 8 43 1180 FBgn0033984 772.6433333 22.73333333 35.04666667 0.055653104 1.891495601 1.226935515 2 2 2 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 2R 14945465 14945470 - 2R_14945465_14945470_- 0.964337753 0.997007279 0.980672516 0.023100825 aPKC FBtr0329887|FBtr0329890|FBtr0303431|FBtr0329888|FBtr0303433|FBtr0329889 14945112|14945112|14945112|14945112|14945112|14945112 14946515|14946046|14946515|14946515|14946515|14946063 2R - 14945431 14945490 3'utr aPKC FlyBase G23483.1 ACTCTAATGTAAAATGTGTGTGTGTTAGTATTAGAGAGCAGAGCATGGTTTTTAAAGGCG 10 14945476 0.960664226 5 8 79 0.916666667 1.041392685 0.5 0.1 0.25 10 1 0 11 2R:14945431-14945490 6 aPKC FBtr0329890|FBtr0303431|FBtr0303433|FBtr0329888|FBtr0329889|FBtr0329887 14945112|14945112|14945112|14945112|14945112|14945112 14946046|14946515|14946515|14946515|14946063|14946515 TGTGTT 6mer3-8 dme-miR-317-3p 2R - 14945444 14945485 3'utr aPKC FlyBase G17795.1 AATGTAAAATGTGTGTGTGTTAGTATTAGAGAGCAGAGCATG 5 14945475 0.989935165 4 4 40 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 2R:14945444-14945485 6 5.5 1181 FBgn0261854 1305.743333 49.00666667 75.25333333 0.00421216 0.112229629 0.073086464 6 5 5.5 0.1 dme-miR-33-5p 8mer-A1 CAATGCAA 2R 14945723 14945730 - 2R_14945723_14945730_- 0.600814331 0.547599259 0.574206795 0.037628687 aPKC FBtr0329887|FBtr0329890|FBtr0303431|FBtr0329888|FBtr0303433|FBtr0329889 14945112|14945112|14945112|14945112|14945112|14945112 14946515|14946046|14946515|14946515|14946515|14946063 2R - 14945681 14945745 3'utr aPKC FlyBase G23485.1 AACCATTTCAAAACTCAATGCAAGACTTTTCACCAAGAAACTTAGGGGTTTGACGATCCCGCGAG 42 14945717 0.97226582 5 39 232 0.941176471 1.681241237 0.019607843 0.119047619 0.274509804 42 3 0 48 2R:14945681-14945745 8 aPKC FBtr0329890|FBtr0303431|FBtr0303433|FBtr0329888|FBtr0329889|FBtr0329887 14945112|14945112|14945112|14945112|14945112|14945112 14946046|14946515|14946515|14946515|14946063|14946515 CAATGCAA 8mer-A1 dme-miR-33-5p 2R - 14945703 14945772 3'utr aPKC FlyBase G17796.1 AGGCGAACTTTATGCAAGCAAAAGATAAACCATTTCAAAACTCAATGCAAGACTTTTCACCAAGAAACTT 35 14945717 0.885558642 6 34 172 0.979591837 1.681241237 0.040816327 0.285714286 0.489795918 35 1 0 48 2R:14945703-14945772 8 35 1182 FBgn0261854 1305.743333 49.00666667 75.25333333 0.026804655 0.714188546 0.465095677 -13 -13 -13 0.1 dme-miR-318-3p 7mer-A1 CCAGTGA 2R 14946395 14946401 - 2R_14946395_14946401_- 0.823348548 0.823349547 0.823349048 7.07E-07 aPKC FBtr0329887|FBtr0303429|FBtr0303430|FBtr0303437|FBtr0303434|FBtr0303435|FBtr0303431|FBtr0329888|FBtr0303433|FBtr0303432 14945112|14946104|14946104|14946104|14944456|14946104|14945112|14945112|14945112|14946104 14946515|14946515|14946515|14946776|14946515|14946515|14946515|14946515|14946515|14946515 2R - 14946360 14946412 3'utr aPKC FlyBase G23486.1 TGGCGAGGATTCCAGTGATTACGATTCCGTGGCTGACGATTTGAGTCTCCTGC 12 14946390 0.688360049 5 12 88 1 1.146128036 0.357142857 0.083333333 0.214285714 12 0 0 14 2R:14946360-14946412 7 aPKC FBtr0303434|FBtr0303432|FBtr0303431|FBtr0303435|FBtr0303433|FBtr0329888|FBtr0329887|FBtr0303429|FBtr0303430|FBtr0303437 14944456|14946104|14945112|14946104|14945112|14945112|14945112|14946104|14946104|14946104 14946515|14946515|14946515|14946515|14946515|14946515|14946515|14946515|14946515|14946776 CCAGTGA 7mer-A1 dme-miR-318-3p 2R - 14946361 14946411 3'utr aPKC FlyBase G17797.1 GGCGAGGATTCCAGTGATTACGATTCCGTGGCTGACGATTTGAGTCTCCTG 7 14946392 0.975518432 4 7 44 1 1.079181246 0.583333333 0.571428571 0.75 7 0 0 12 2R:14946361-14946411 7 8 1183 FBgn0261854 1305.743333 49.00666667 75.25333333 0.006126778 0.163243096 0.106307583 -11 -9 -10 0.1 dme-bantam-3p 7mer-A1 GATCTCA 2R 15142987 15142993 + 2R_15142987_15142993_+ 0.823347349 0.823349559 0.823348454 1.63E-06 chn FBtr0305217 15140383 15143633 2R + 15142975 15143012 3'utr chn FlyBase G16024.1 AAACGGCAGTTGGATCTCAGCACACCTCGTCGGAGTCC 11 15142984 0.827527859 2 10 43 0.928571429 1.113943352 0 0.272727273 0.428571429 11 1 0 13 2R:15142975-15143012 7 chn FBtr0305217 15140383 15143633 GATCTCA 7mer-A1 dme-bantam-3p 2R + 15142975 15143012 3'utr chn FlyBase G12169.1 AAACGGCAGTTGGATCTCAGCACACCTCGTCGGAGTCC 9 15142985 0.850944964 3 8 38 0.9375 1.176091259 0 0.555555556 0.75 9 1 0 15 2R:15142975-15143012 7 10 1184 FBgn0015371 413.87 9.896666667 15.28666667 0.024162177 1.010441226 0.65416485 3 2 2.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 2R 15143592 15143599 + 2R_15143592_15143599_+ 0.667723747 0.66769679 0.667710269 1.90E-05 chn FBtr0305217|FBtr0305214|FBtr0111006|FBtr0305213|FBtr0087415|FBtr0305215|FBtr0087416|FBtr0305216 15140383|15143450|15143450|15143450|15143450|15143450|15143450|15143450 15143633|15144783|15143633|15144783|15144783|15144783|15143633|15144783 2R + 15143549 15143617 3'utr chn FlyBase G16025.1 ATTTAAAAAATTGCATTTAATTTTTTAAATTTTAAGTTGTGATGTACCTGAAATATGATTTCTCTTAAA 365 15143591 0.848455508 6 359 2596 0.987288136 2.668385917 0.006355932 0.235616438 0.408898305 365 6 0 466 2R:15143549-15143617 8 chn FBtr0087416|FBtr0305216|FBtr0087415|FBtr0305215|FBtr0111006|FBtr0305213|FBtr0305217|FBtr0305214 15143450|15143450|15143450|15143450|15143450|15143450|15140383|15143450 15143633|15144783|15144783|15144783|15143633|15144783|15143633|15144783 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2R + 15143549 15143619 3'utr chn FlyBase G12170.1 ATTTAAAAAATTGCATTTAATTTTTTAAATTTTAAGTTGTGATGTACCTGAAATATGATTTCTCTTAAACA 276 15143591 0.957782997 6 275 1914 0.997487437 2.598790507 0.005025126 0.358695652 0.555276382 276 1 0 397 2R:15143549-15143619 8 316 1185 FBgn0015371 413.87 9.896666667 15.28666667 0.763524778 31.92994274 20.67160925 1 1 1 0.1 dme-miR-283-5p 8mer-m1 TGATATTT 2R 15204187 15204194 + 2R_15204187_15204194_+ 0.555563113 0.555580089 0.555571601 1.20E-05 CG11807 FBtr0087363|FBtr0310139 15204105|15204105 15204466|15204466 2R + 15204172 15204212 3'utr CG11807 FlyBase G16044.1 ATAAGTATTGCCTATTGATATTTCTTGCAACTAAACCCTAT 15 15204186 0.754482161 4 13 155 0.882352941 1.176091259 0.117647059 0.133333333 0.235294118 15 2 0 15 2R:15204172-15204212 8 CG11807 FBtr0310139|FBtr0087363 15204105|15204105 15204466|15204466 TGATATTT 8mer-m1 dme-miR-283-5p 2R + 15204170 15204200 3'utr CG11807 FlyBase G12180.1 TTATAAGTATTGCCTATTGATATTTCTTGCA 7 15204186 0.772898109 2 7 82 1 0.954242509 0.333333333 0.285714286 0.444444444 7 0 0 9 2R:15204170-15204200 8 11 1186 FBgn0033996 352.6333333 22.09 33.89 0.031193875 0.497962879 0.324579522 1 1 1 0.1 dme-miR-999-3p 6mer3-8 AGTTAA 2R 15206886 15206891 - 2R_15206886_15206891_- 0.991204804 1 0.995602402 0.006219146 row FBtr0087402 15206525 15206949 2R - 15206881 15206931 stop_codon row FlyBase G23525.2 CTCAAATCACGCGACTATACCCTTCACTGGCAGAACTATTAGTTAAAGTTC 201 15206904 0.852814722 12 161 1631 0.803571429 1.301029996 0.544642857 0.109452736 0.200892857 201 36 8 180 2R:15206881-15206931 6 row FBtr0087402 15206525 15206949 AGTTAA 6mer3-8 dme-miR-999-3p 2R - 15206846 15206929 stop_codon row FlyBase G17822.1 CAAATCACGCGACTATACCCTTCACTGGCAGAACTATTAGTTAAAGTTCATTCATATTCATCGCACATTGGCCATATCCCGAAT 135 15206904 0.989251937 11 111 1064 0.835748792 1.459894853 0.570048309 0.348148148 0.574879227 135 29 5 173 2R:15206846-15206929 6 96 1187 FBgn0033998 1573.363333 48.92333333 74.57333333 0.061015786 1.962253867 1.28732344 13 13 13 0.1 dme-miR-2535b-3p 6mer3-8 CCGTGA 2R 15211531 15211536 - 2R_15211531_15211536_- 0.995421806 0.999922515 0.99767216 0.003182475 row FBtr0087403 15211243 15211571 2R - 15211519 15211549 3'utr row FlyBase G23543.1 GTTTTTATTTAGGCCGTGAATAGAATAGTGC 9 15211542 0.689304339 3 9 81 1 1.041392685 0.090909091 0.222222222 0.363636364 9 0 0 11 2R:15211519-15211549 6 row FBtr0087403 15211243 15211571 CCGTGA 6mer3-8 dme-miR-2535b-3p 2R - 15211516 15211551 3'utr row FlyBase G17835.1 AAGTTTTTATTTAGGCCGTGAATAGAATAGTGCGTT 8 15211541 0.694719022 4 8 74 1 1.041392685 0.090909091 0.375 0.545454545 8 0 0 11 2R:15211516-15211551 6 8.5 1188 FBgn0033998 1573.363333 48.92333333 74.57333333 0.005402439 0.173741228 0.113981763 6 5 5.5 0.1 dme-bantam-3p 6mer2-7 GATCTC 2R 15222769 15222774 + 2R_15222769_15222774_+ 0.999999999 0.999999973 0.999999986 0 CG8079 FBtr0339995|FBtr0339994 15222101|15222101 15223671|15223671 2R + 15222738 15222779 3'utr CG8079 FlyBase G16051.1 CAATGGATCCCCAATGTCCAGCGACGCCATGGATCTCGTTCA 7 15222767 0.963412443 3 7 35 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 2R:15222738-15222779 6 CG8079 FBtr0339995|FBtr0339994 15222101|15222101 15223671|15223671 GATCTC 6mer2-7 dme-bantam-3p 2R + 15222751 15222786 3'utr CG8079 FlyBase G12187.1 ATGTCCAGCGACGCCATGGATCTCGTTCACGGCAGT 12 15222767 0.959183692 2 11 56 0.947368421 1.255272505 0.210526316 0.5 0.684210526 12 1 0 18 2R:15222751-15222786 6 9 1189 FBgn0034002 425.32 23.75 36.47 0.021160538 0.378947368 0.246778174 2 2 2 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2R 15258356 15258361 + 2R_15258356_15258361_+ 0.996874945 0.9291245 0.962999722 0.047906767 scb FBtr0087369|FBtr0087370 15257714|15257714 15258498|15258498 2R + 15258326 15258366 3'utr scb FlyBase G16057.1 TTGTAAAGGTAGCTTTACAGGGCGACGTGAAAGACTTTATT 23 15258363 0.94031095 3 23 140 1 1.477121255 0.133333333 0.217391304 0.4 23 0 0 30 2R:15258326-15258366 6 scb FBtr0087369|FBtr0087370 15257714|15257714 15258498|15258498 AAGACT 6mer3-8 dme-miR-14-3p 2R + 15258322 15258371 3'utr scb FlyBase G12190.1 AAATTTGTAAAGGTAGCTTTACAGGGCGACGTGAAAGACTTTATTAATGT 12 15258364 0.969296591 6 12 70 1 1.204119983 0.0625 0.25 0.4375 12 0 0 16 2R:15258322-15258371 6 15 1190 FBgn0003328 302.4766667 8.453333333 13.12333333 0.049590602 1.77444795 1.143002286 -7 -8 -7.5 0.1 dme-miR-252-5p 7mer-m8 GTACTTA 2R 15262867 15262873 - 2R_15262867_15262873_- 0.588151146 0.588239575 0.58819536 6.26E-05 Trpm FBtr0339080|FBtr0339082|FBtr0339077|FBtr0339079|FBtr0339074|FBtr0339081|FBtr0339078|FBtr0339076 15262806|15262806|15262806|15262806|15262806|15262806|15262806|15262806 15263722|15263722|15263722|15263722|15263722|15263722|15263722|15263722 2R - 15262850 15262977 3'utr Trpm FlyBase G23564.1 AAATTGTTCATGTTTGGCCAATGTGTGCTAGTAACTTAAATTAGATTTTTAAATATTTTCAAGGATTAAGAATAACAATGCATTTTAATAAAATATTTATGATTGTACTTATTTATGTTAAGAATTGT 61 15262874 0.89564363 13 58 592 0.945205479 1.537819095 0.068493151 0.180327869 0.315068493 61 3 1 69 2R:15262850-15262977 7 Trpm FBtr0339074|FBtr0339081|FBtr0339078|FBtr0339076|FBtr0339080|FBtr0339077|FBtr0339082|FBtr0339079 15262806|15262806|15262806|15262806|15262806|15262806|15262806|15262806 15263722|15263722|15263722|15263722|15263722|15263722|15263722|15263722 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 15262852 15262915 3'utr Trpm FlyBase G17844.1 GGATTAAGAATAACAATGCATTTTAATAAAATATTTATGATTGTACTTATTTATGTTAAGAATT 26 15262874 0.798963332 8 26 242 1 1.591064607 0.128205128 0.461538462 0.641025641 26 0 0 39 2R:15262852-15262915 7 17 1191 FBgn0265194 654.6833333 11.36 17.34333333 0.025966752 1.496478873 0.980203729 1 1 1 0.1 dme-miR-980-3p 6mer2-7 GCAGCT 2R 15263210 15263215 - 2R_15263210_15263215_- 0.999209944 0.885506615 0.942358279 0.080400374 Trpm FBtr0339080|FBtr0339082|FBtr0339077|FBtr0339079|FBtr0339074|FBtr0339081|FBtr0339078|FBtr0339076 15262806|15262806|15262806|15262806|15262806|15262806|15262806|15262806 15263722|15263722|15263722|15263722|15263722|15263722|15263722|15263722 2R - 15263185 15263242 3'utr Trpm FlyBase G23566.1 TTACCTCAGCTCAATTAGAAACCTATCGCAGCTCAATGTACTTTATGCCTGTCCCTGT 59 15263217 0.833470585 8 55 324 0.935897436 1.386201605 0.064102564 0.305084746 0.474358974 59 3 2 73 2R:15263185-15263242 6 Trpm FBtr0339074|FBtr0339081|FBtr0339078|FBtr0339076|FBtr0339080|FBtr0339077|FBtr0339082|FBtr0339079 15262806|15262806|15262806|15262806|15262806|15262806|15262806|15262806 15263722|15263722|15263722|15263722|15263722|15263722|15263722|15263722 GCAGCT 6mer2-7 dme-miR-980-3p 2R - 15263177 15263228 3'utr Trpm FlyBase G17846.1 TTAGAAACCTATCGCAGCTCAATGTACTTTATGCCTGTCCCTGTCGGAGTTC 31 15263206 0.718915996 5 30 165 0.976190476 1.612783857 0.119047619 0.322580645 0.5 31 1 0 41 2R:15263177-15263228 6 37.5 1192 FBgn0265194 654.6833333 11.36 17.34333333 0.057279601 3.301056338 2.162214107 2 -9 -3.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2R 15263656 15263662 - 2R_15263656_15263662_- 0.821928524 0.823298952 0.822613738 0.00096909 Trpm FBtr0339080|FBtr0339082|FBtr0339077|FBtr0339079|FBtr0339074|FBtr0339081|FBtr0339078|FBtr0339076 15262806|15262806|15262806|15262806|15262806|15262806|15262806|15262806 15263722|15263722|15263722|15263722|15263722|15263722|15263722|15263722 2R - 15263634 15263681 3'utr Trpm FlyBase G23567.1 ACTGTGCTCAATGGGAAAACTAGTCATAAGAGTGGGGTGATAAATAAG 20 15263655 0.780136088 5 19 91 0.954545455 1.322219295 0.363636364 0.05 0.136363636 20 1 0 21 2R:15263634-15263681 7 Trpm FBtr0339074|FBtr0339081|FBtr0339078|FBtr0339076|FBtr0339080|FBtr0339077|FBtr0339082|FBtr0339079 15262806|15262806|15262806|15262806|15262806|15262806|15262806|15262806 15263722|15263722|15263722|15263722|15263722|15263722|15263722|15263722 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R - 15263613 15263713 3'utr Trpm FlyBase G17847.1 AGGCCGACGAAAATGGATCGTGTGTGTCCCACACTGTGCTCAATGGGAAAACTAGTCATAAGAGTGGGGTGATAAATAAGTTGTTGAACTAGCGTTGGGAT 20 15263655 0.957283412 7 18 91 0.884615385 1.361727836 0.269230769 0.25 0.423076923 20 3 0 23 2R:15263613-15263713 7 17 1193 FBgn0265194 654.6833333 11.36 17.34333333 0.025966752 1.496478873 0.980203729 -7 -7 -7 0.1 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2R 15266558 15266563 - 2R_15266558_15266563_- 0.999736805 0.994953174 0.997344989 0.003382516 Trpm FBtr0339075 15266379 15267776 2R - 15266540 15266582 3'utr Trpm FlyBase G23572.1 TGCTTTAGCTTCTAGGCTCTTTGACATCAGTAATATTATATAT 17 15266562 0.720090845 5 16 151 1 1.255272505 0.111111111 0.058823529 0.111111111 17 0 0 18 2R:15266540-15266582 6 Trpm FBtr0339075 15266379 15267776 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2R - 15266508 15266585 3'utr Trpm FlyBase G17849.1 ACATGCTTTAGCTTCTAGGCTCTTTGACATCAGTAATATTATATATTTTGCAGACTCTCTTTTAATTATTTTTAAACC 8 15266562 0.984523894 4 8 73 1 1.079181246 0.25 0.375 0.583333333 8 0 0 12 2R:15266508-15266585 6 9.5 1194 FBgn0265194 654.6833333 11.36 17.34333333 0.014510832 0.836267606 0.547760907 -1 -1 -1 0.1 dme-miR-307a-3p 7mer-m8 GGTTGTG 2R 15312904 15312910 + 2R_15312904_15312910_+ 0.702971967 0.702971345 0.702971656 4.95E-07 mus210 FBtr0308700 15312836 15312964 2R + 15312843 15312937 3'utr mus210 FlyBase G16063.1 CAGCCAGGCTCCCGGAAGAGTTGGCGTTGGCAGAAGGCAGTCGAGCATGCTTATCCAAGTTGGTTGTGGCGCTGGCATTTCTGGTATCTGATGAA 13 15312903 0.980783063 8 13 89 1 1.113943352 0.153846154 0 0 13 0 0 13 2R:15312843-15312937 7 mus210 FBtr0308700 15312836 15312964 GGTTGTG 7mer-m8 dme-miR-307a-3p 2R + 15312891 15312937 3'utr mus210 FlyBase G12192.1 GCTTATCCAAGTTGGTTGTGGCGCTGGCATTTCTGGTATCTGATGAA 6 15312903 0.983056415 4 6 48 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 2R:15312891-15312937 7 7 1195 FBgn0004698 1924.22 65.94333333 101.31 0.003637838 0.106151746 0.069094857 1 1 1 0.1 dme-miR-970-3p 6mer3-8 TCTTAT 2R 15317987 15317992 - 2R_15317987_15317992_- 0.999881228 0.792313748 0.896097488 0.146772387 CG8155 FBtr0087391 15317815 15318579 2R - 15317944 15318031 3'utr CG8155 FlyBase G23587.1 GCAAATAAATTGACGGATCTATAACCCAAATAACCATAATCTTATTATCTCAAACGTTCTGTATCTTAAAAATCTCTCAACGTACTCT 9 15317986 0.984105709 8 9 69 1 1 0.2 0.111111111 0.2 9 0 0 10 2R:15317944-15318031 6 CG8155 FBtr0087391 15317815 15318579 TCTTAT 6mer3-8 dme-miR-970-3p 2R - 15317938 15317990 3'utr CG8155 FlyBase G17861.1 TTATTATCTCAAACGTTCTGTATCTTAAAAATCTCTCAACGTACTCTGAAAAC 7 15317972 0.976513542 5 7 46 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 2R:15317938-15317990 4 2.5 1196 FBgn0034009 669.7533333 19.16666667 29.26666667 0.003732718 0.130434783 0.085421412 -6 -20 -13 0.1 dme-miR-33-5p 6mer2-7 AATGCA 2R 15318092 15318097 - 2R_15318092_15318097_- 0.495975502 0.600304459 0.548139981 0.073771743 CG8155 FBtr0087391 15317815 15318579 2R - 15318058 15318170 3'utr CG8155 FlyBase G23588.1 TTTATCTGCACCTTTGCCAAACGATCAAATGCGAGCTGTTTGGCTGGAAATTGCTTTATTTCTCTAGTCTGCTAATGCATTCCATGCTGTTGTAAAAACTATATTTTAGATTT 100 15318101 0.797159459 17 92 965 0.911290323 2.053078443 0.274193548 0.19 0.346774194 100 11 0 113 2R:15318058-15318170 6 CG8155 FBtr0087391 15317815 15318579 AATGCA 6mer2-7 dme-miR-33-5p 2R - 15318042 15318167 3'utr CG8155 FlyBase G17862.1 ATCTGCACCTTTGCCAAACGATCAAATGCGAGCTGTTTGGCTGGAAATTGCTTTATTTCTCTAGTCTGCTAATGCATTCCATGCTGTTGTAAAAACTATATTTTAGATTTAAAATCGCGCCTAAAT 64 15318101 0.989255874 17 62 594 0.978723404 1.963787827 0.308510638 0.359375 0.563829787 64 2 0 92 2R:15318042-15318167 6 43.5 1197 FBgn0034009 669.7533333 19.16666667 29.26666667 0.064949285 2.269565217 1.486332574 4 4 4 0.1 dme-miR-986-5p 6mer3-8 ATTCGA 2R 15324392 15324397 + 2R_15324392_15324397_+ 0.999458403 0.999998512 0.999728457 0.000381908 Arf51F FBtr0087379|FBtr0087376|FBtr0087375|FBtr0087377|FBtr0087378 15324343|15324343|15324343|15324343|15324343 15324892|15324892|15325490|15324892|15324892 2R + 15324188 15324432 lincRNA_intron-lincRNA_exon Arf51F FlyBase G16088.1 GTTCTCTCTTGCAGCAATGAAACCCCATGAAATCCAGGAAAAACTAGGTTTAACTAGAATAAGAGATCGCAATTGGTATGTACAACCATCATGTGCCACATCCGGCGATGGCCTGTCCGAGGGCCTCATTTGGTTAACGTCGAACCATAAGTTATGAGAATCGTAATCGAGCATTTTCTTATATGTATGTATATGGCATGTATTATTCGAAGCGAAGCAAAAGCGAAAATATTCTATTTTATTTA 44 15324381 0.982028839 22 44 322 1 1.73239376 0.240740741 0.181818182 0.333333333 44 0 0 54 2R:15324188-15324432 6 Arf51F FBtr0087378|FBtr0087375|FBtr0087377|FBtr0087379|FBtr0087376 15324343|15324343|15324343|15324343|15324343 15324892|15325490|15324892|15324892|15324892 ATTCGA 6mer3-8 dme-miR-986-5p 2R + 15324360 15324406 3'utr Arf51F FlyBase G12210.1 ATTTTCTTATATGTATGTATATGGCATGTATTATTCGAAGCGAAGCA 14 15324381 0.962592614 6 11 123 0.857142857 0.77815125 0.333333333 0.357142857 0.571428571 14 1 2 18 2R:15324360-15324406 6 12.5 1198 FBgn0013750 5123.97 471.35 724.4566667 0.002439515 0.026519571 0.01725431 11 11 11 0.1 dme-miR-304-5p 7mer-A1 GAGATTA 2R 15324693 15324699 + 2R_15324693_15324699_+ 0.823349562 0.823349484 0.823349523 7.07E-08 Arf51F FBtr0087379|FBtr0087376|FBtr0087375|FBtr0087377|FBtr0087378 15324343|15324343|15324343|15324343|15324343 15324892|15324892|15325490|15324892|15324892 2R + 15324624 15324718 3'utr Arf51F FlyBase G16089.1 AAGCAGCCGGTAAATATCCGTAAAGTAAATTATGCGTGAAGCACAGAGACATAAAGCAAAACATCAACGGAGATTAGCCTTAAGTAAGTTTTTCT 21 15324698 0.958424837 9 20 97 0.966666667 1.161368002 0.066666667 0.285714286 0.5 21 0 1 29 2R:15324624-15324718 7 Arf51F FBtr0087378|FBtr0087375|FBtr0087377|FBtr0087379|FBtr0087376 15324343|15324343|15324343|15324343|15324343 15324892|15325490|15324892|15324892|15324892 GAGATTA 7mer-A1 dme-miR-304-5p 2R + 15324630 15324712 3'utr Arf51F FlyBase G12211.1 CCGGTAAATATCCGTAAAGTAAATTATGCGTGAAGCACAGAGACATAAAGCAAAACATCAACGGAGATTAGCCTTAAGTAAGT 12 15324697 0.951630036 6 11 46 0.956521739 1.041392685 0.173913043 0.583333333 0.782608696 12 0 1 22 2R:15324630-15324712 7 11.5 1199 FBgn0013750 5123.97 471.35 724.4566667 0.002244353 0.024398006 0.015873965 -5 -4 -4.5 0.1 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2R 15324786 15324791 + 2R_15324786_15324791_+ 0.849338914 0.940708565 0.89502374 0.064608134 Arf51F FBtr0087379|FBtr0087376|FBtr0087375|FBtr0087377|FBtr0087378 15324343|15324343|15324343|15324343|15324343 15324892|15324892|15325490|15324892|15324892 2R + 15324758 15324806 3'utr Arf51F FlyBase G16090.1 AAGCTTGTTTATTGCAACTGTTACTATATTTGACTTGAGCAAGGGTGTA 6 15324787 0.994060431 4 4 45 0.555555556 0.698970004 0.333333333 0.5 0.666666667 6 4 0 5 2R:15324758-15324806 6 Arf51F FBtr0087378|FBtr0087375|FBtr0087377|FBtr0087379|FBtr0087376 15324343|15324343|15324343|15324343|15324343 15324892|15325490|15324892|15324892|15324892 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2R + 15324738 15324804 3'utr Arf51F FlyBase G12212.1 ACACGTAAGCAATAAGTTGAAAGCTTGTTTATTGCAACTGTTACTATATTTGACTTGAGCAAGGGTG 10 15324769 0.986719804 7 9 81 0.916666667 1.041392685 0.25 0.2 0.333333333 10 1 0 11 2R:15324738-15324804 6 5 1200 FBgn0013750 5123.97 471.35 724.4566667 0.000975806 0.010607829 0.006901724 -1 17 8 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 15367647 15367653 + 2R_15367647_15367653_+ 0.63951498 0.647558055 0.643536517 0.005687331 unc-5 FBtr0087382|FBtr0339998 15367154|15367154 15368300|15368300 2R + 15367607 15367706 3'utr unc-5 FlyBase G16103.1 AAGTGTAGCTGTAGTCATAGTCACTAAGTTACTGTAGTGTTGTGTTCTAAGGTAACTTGCTCAACGAACTTTGTTCCCTATGGGTGCCATGCATTTTATA 26 15367646 0.735667145 14 24 230 0.9375 1.477121255 0.1875 0.153846154 0.3125 26 2 0 30 2R:15367607-15367706 7 unc-5 FBtr0339998|FBtr0087382 15367154|15367154 15368300|15368300 TGTGTTC 7mer-m8 dme-miR-317-3p 2R + 15367606 15367739 3'utr unc-5 FlyBase G12222.1 AAAGTGTAGCTGTAGTCATAGTCACTAAGTTACTGTAGTGTTGTGTTCTAAGGTAACTTGCTCAACGAACTTTGTTCCCTATGGGTGCCATGCATTTTATACACTAAACAGGAAGAATGTAGCGTTTAATTATA 27 15367646 0.771039974 15 24 231 0.95 1.579783597 0.15 0.481481481 0.65 27 2 0 38 2R:15367606-15367739 7 10.5 1201 FBgn0034013 1156.016667 26.96666667 41.28333333 0.009082914 0.389369592 0.254339927 1 1 1 0.1 dme-miR-12-5p 7mer-A1 ATACTCA 2R 15368156 15368162 + 2R_15368156_15368162_+ 0.727186554 0.589033342 0.658109948 0.097689135 unc-5 FBtr0087382|FBtr0339998 15367154|15367154 15368300|15368300 2R + 15368143 15368223 3'utr unc-5 FlyBase G16108.1 TAGTTTGTTAGACATACTCAAGTGATAACCTTTGTATTTGTCTTTAGATGTAAGTCTGATCCTGTCGTTTAATCGTTAATC 32 15368185 0.864630377 15 30 311 0.945945946 1.544068044 0.189189189 0.125 0.243243243 32 2 0 35 2R:15368143-15368223 7 unc-5 FBtr0339998|FBtr0087382 15367154|15367154 15368300|15368300 ATACTCA 7mer-A1 dme-miR-12-5p 2R + 15368132 15368214 3'utr unc-5 FlyBase G12224.1 AACAAAACGAGTAGTTTGTTAGACATACTCAAGTGATAACCTTTGTATTTGTCTTTAGATGTAAGTCTGATCCTGTCGTTTAA 28 15368185 0.991252161 16 24 250 0.808510638 1.102662342 0.212765957 0.464285714 0.680851064 28 7 2 38 2R:15368132-15368214 7 10 1202 FBgn0034013 1156.016667 26.96666667 41.28333333 0.008650394 0.370828183 0.242228502 -29 -29 -29 0.1 dme-miR-1007-3p 6mer3-8 TGAGCT 2R 15386600 15386605 + 2R_15386600_15386605_+ 0.999920646 0.99994422 0.999932433 1.67E-05 SRPK FBtr0087385|FBtr0087384 15385390|15385390 15387851|15387851 2R + 15386575 15386621 3'utr SRPK FlyBase G16125.1 GTATATGTACATGGATGCAGAAACTTGAGCTGAACATAACAATAATG 14 15386600 0.806709942 3 14 71 1 1.204119983 0.3125 0.071428571 0.1875 14 0 0 16 2R:15386575-15386621 6 SRPK FBtr0087385|FBtr0087384 15385390|15385390 15387851|15387851 TGAGCT 6mer3-8 dme-miR-1007-3p 2R + 15386579 15386614 3'utr SRPK FlyBase G12235.1 ATGTACATGGATGCAGAAACTTGAGCTGAACATAAC 9 15386600 0.720080549 3 9 36 1 1.204119983 0 0.333333333 0.625 9 0 0 16 2R:15386579-15386614 6 11 1203 FBgn0026370 1940.296667 50.52 77.84666667 0.005669236 0.21773555 0.141303417 0 0 0 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 2R 15387573 15387578 + 2R_15387573_15387578_+ 0.925474446 0.921315804 0.923395125 0.002940574 SRPK FBtr0087385|FBtr0087385|FBtr0087384|FBtr0087384 15385390|15385390|15385390|15385390 15387851|15387851|15387851|15387851 2R + 15387565 15387603 3'utr SRPK FlyBase G16130.1 TTCGAAAATACTTACGCATATACTCTTTGAAAATCGCCC 12 15387576 0.93515922 3 11 87 0.923076923 1.079181246 0 0.083333333 0.153846154 12 1 0 12 2R:15387565-15387603 6 SRPK FBtr0087385|FBtr0087385|FBtr0087384|FBtr0087384 15385390|15385390|15385390|15385390 15387851|15387851|15387851|15387851 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 2R + 15387530 15387597 3'utr SRPK FlyBase G12236.1 TAAAGAAAATTCAATAATCTTCGGCTGGCCGATGTTTCGAAAATACTTACGCATATACTCTTTGAAAA 7 15387576 0.979581991 2 7 52 1 1.041392685 0.181818182 0.571428571 0.727272727 7 0 0 11 2R:15387530-15387597 6 8 1204 FBgn0026370 1940.296667 50.52 77.84666667 0.004123081 0.158353127 0.102766121 -3 -3 -3 0.1 dme-miR-8-3p 6mer3-8 CAGTAT 2R 15387745 15387750 + 2R_15387745_15387750_+ 0.996324542 0.995946863 0.996135703 0.000267004 SRPK FBtr0087385|FBtr0087384 15385390|15385390 15387851|15387851 2R + 15387718 15387774 3'utr SRPK FlyBase G16131.1 AGGAACCCAGCTGCCGAATTGCAATTCCAGTATGTTCTCACGCTTTCAAAGAGTATA 12 15387750 0.987288356 8 11 94 0.923076923 0.77815125 0.153846154 0.083333333 0.153846154 12 0 1 12 2R:15387718-15387774 6 SRPK FBtr0087385|FBtr0087384 15385390|15385390 15387851|15387851 CAGTAT 6mer3-8 dme-miR-8-3p 2R + 15387726 15387775 3'utr SRPK FlyBase G12237.1 AGCTGCCGAATTGCAATTCCAGTATGTTCTCACGCTTTCAAAGAGTATAA 7 15387743 0.977105951 6 7 61 1 1.041392685 0.181818182 0.428571429 0.636363636 7 0 0 11 2R:15387726-15387775 6 9 1205 FBgn0026370 1940.296667 50.52 77.84666667 0.004638466 0.178147268 0.115611887 -5 2 -1.5 0.1 dme-miR-1012-3p 7mer-A1 TGACTAA 2R 15515073 15515079 + 2R_15515073_15515079_+ 0.823348878 0.823349562 0.82334922 4.95E-07 GalNAc-T1 FBtr0340001|FBtr0087332|FBtr0087331 15515017|15515017|15515017 15515597|15515597|15515597 2R + 15515013 15515099 stop_codon GalNAc-T1 FlyBase G16135.1 CACTGAGGAGATAGGGTGTAGCGGGGGAATGGGATGGGGACCAAAGCAACTGAGAGATACTGACTAACGCCGACTGAACGGAACTCG 77 15515070 0.936978837 8 67 256 0.894117647 1.579783597 0.305882353 0.077922078 0.164705882 77 8 1 76 2R:15515013-15515099 7 GalNAc-T1 FBtr0087331|FBtr0087332|FBtr0340001 15515017|15515017|15515017 15515597|15515597|15515597 TGACTAA 7mer-A1 dme-miR-1012-3p 2R + 15515055 15515105 3'utr GalNAc-T1 FlyBase G12239.1 AAAGCAACTGAGAGATACTGACTAACGCCGACTGAACGGAACTCGAATTCA 51 15515070 0.738278793 6 47 157 0.931034483 1.431363764 0.252873563 0.509803922 0.712643678 51 4 2 81 2R:15515055-15515105 7 60.5 1206 FBgn0034025 414.2533333 21.30666667 32.93666667 0.146045898 2.839486859 1.836858618 3 3 3 0.1 dme-miR-980-5p 7mer-m1 AAAAACT 2R 15515562 15515568 + 2R_15515562_15515568_+ 0.735474763 0.716775153 0.726124958 0.013222614 GalNAc-T1 FBtr0340001|FBtr0087332|FBtr0087331 15515017|15515017|15515017 15515597|15515597|15515597 2R + 15515536 15515598 3'utr GalNAc-T1 FlyBase G16137.1 TTTGCCATTTGTTTTCATGAATAAAAAAAAACTTCCGACTGGAGGATGTACATCTTCAAACGA 22 15515568 0.886445281 6 22 134 1 1.414973348 0.384615385 0.090909091 0.230769231 22 0 0 26 2R:15515536-15515598 7 GalNAc-T1 FBtr0087331|FBtr0087332|FBtr0340001 15515017|15515017|15515017 15515597|15515597|15515597 AAAAACT 7mer-m1 dme-miR-980-5p 2R + 15515559 15515598 3'utr GalNAc-T1 FlyBase G12242.1 AAAAAAAACTTCCGACTGGAGGATGTACATCTTCAAACGA 9 15515568 0.924470398 2 9 35 1 1.041392685 0.636363636 0.222222222 0.363636364 9 0 0 11 2R:15515559-15515598 7 12.5 1207 FBgn0034025 414.2533333 21.30666667 32.93666667 0.030174772 0.586670839 0.379516243 -6 -6 -6 0.1 dme-miR-11-3p 7mer-m1 TGTGATG 2R 15517768 15517774 - 2R_15517768_15517774_- 0.535593563 0.535593563 0.535593563 0 Khc-73 FBtr0329957|FBtr0087357|FBtr0329956|FBtr0329955|FBtr0346265 15517705|15517705|15515776|15517705|15517705 15518577|15518751|15518751|15518751|15518751 2R - 15517747 15517797 3'utr Khc-73 FlyBase G23622.1 ATGTGTAAATTGTATTATTTTGATGTGATGTATTTATAATTTCCCTTTATA 55 15517779 0.662314028 12 50 715 0.904761905 1.755874856 0.222222222 0.145454545 0.253968254 55 6 0 57 2R:15517747-15517797 7 Khc-73 FBtr0329955|FBtr0346265|FBtr0087357|FBtr0329956|FBtr0329957 15517705|15517705|15517705|15515776|15517705 15518751|15518751|15518751|15518751|15518577 TGTGATG 7mer-m1 dme-miR-11-3p 2R - 15517754 15517813 3'utr Khc-73 FlyBase G17883.1 CGCACCGTCGCAGTTAATGTGTAAATTGTATTATTTTGATGTGATGTATTTATAATTTCC 46 15517778 0.619482257 9 42 572 0.920634921 1.286306739 0.174603175 0.282608696 0.476190476 46 3 2 58 2R:15517754-15517813 7 46.5 1208 FBgn0019968 1323.716667 22.35333333 34.32 0.035128363 2.080226663 1.354895105 5 4 4.5 0.1 dme-miR-1007-3p 6mer3-8 TGAGCT 2R 15517964 15517969 - 2R_15517964_15517969_- 0.999999999 0.99998348 0.999991739 1.17E-05 Khc-73 FBtr0329957|FBtr0087357|FBtr0329956|FBtr0329955|FBtr0346265 15517705|15517705|15515776|15517705|15517705 15518577|15518751|15518751|15518751|15518751 2R - 15517937 15517994 3'utr Khc-73 FlyBase G23623.1 AATTTCGTCTCCATATGACCTTTCCTGAGCTCATTTTCTTTTTAGCGCATTTATATAC 25 15517979 0.990037848 8 24 237 0.96969697 1.505149978 0.03030303 0.24 0.424242424 25 1 0 32 2R:15517937-15517994 6 Khc-73 FBtr0329955|FBtr0346265|FBtr0087357|FBtr0329956|FBtr0329957 15517705|15517705|15517705|15515776|15517705 15518751|15518751|15518751|15518751|15518577 TGAGCT 6mer3-8 dme-miR-1007-3p 2R - 15517946 15518008 3'utr Khc-73 FlyBase G17884.1 TAAGATCTTGCAATAATTTCGTCTCCATATGACCTTTCCTGAGCTCATTTTCTTTTTAGCGCA 12 15517960 0.989103882 8 11 108 1 1.342422681 0.045454545 0.583333333 0.772727273 12 0 0 22 2R:15517946-15518008 6 14 1209 FBgn0019968 1323.716667 22.35333333 34.32 0.010576281 0.626304802 0.407925408 10 -9 0.5 0.1 dme-miR-1007-3p 8mer-A1 TGAGCTTA 2R 15518060 15518067 - 2R_15518060_15518067_- 0.602523838 0.520543709 0.561533774 0.057968685 Khc-73 FBtr0329957|FBtr0087357|FBtr0329956|FBtr0329955|FBtr0346265 15517705|15517705|15515776|15517705|15517705 15518577|15518751|15518751|15518751|15518751 2R - 15518019 15518168 3'utr Khc-73 FlyBase G23624.1 TTCGATTTTGGAATGAAGCGTTTTACTGATATATTTTCTAATGGTTCTTTGCCTTTAGTTTAGTTAAATTGTTTTTGATATCAATGTGACTTGTTTAACGATGAGCTTATATTTTTACTTGTTATTGACTATATTCAATATATTTGTATA 70 15518067 0.993028279 21 65 770 0.93902439 1.886490725 0.243902439 0.1 0.231707317 70 5 0 77 2R:15518019-15518168 8 Khc-73 FBtr0329955|FBtr0346265|FBtr0087357|FBtr0329956|FBtr0329957 15517705|15517705|15517705|15515776|15517705 15518751|15518751|15518751|15518751|15518577 TGAGCTTA 8mer-A1 dme-miR-1007-3p 2R - 15518047 15518098 3'utr Khc-73 FlyBase G17885.1 GTTTTTGATATCAATGTGACTTGTTTAACGATGAGCTTATATTTTTACTTGT 32 15518067 0.888361174 8 31 332 0.977272727 1.633468456 0.5 0.34375 0.522727273 32 1 0 43 2R:15518047-15518098 8 20.5 1210 FBgn0019968 1323.716667 22.35333333 34.32 0.015486698 0.917089174 0.597319347 0 0 0 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 15518195 15518201 - 2R_15518195_15518201_- 0.661615388 0.661162893 0.661389141 0.000319966 Khc-73 FBtr0329957|FBtr0087357|FBtr0329956|FBtr0329955|FBtr0346265 15517705|15517705|15515776|15517705|15517705 15518577|15518751|15518751|15518751|15518751 2R - 15518179 15518219 3'utr Khc-73 FlyBase G23625.1 CTTTTGATTCCATTGTTTTGTGTTCGTGTAGTTAATTGTCG 15 15518202 0.755233482 4 15 228 1 1.230448921 0.176470588 0.133333333 0.235294118 15 0 0 17 2R:15518179-15518219 7 Khc-73 FBtr0329955|FBtr0346265|FBtr0087357|FBtr0329956|FBtr0329957 15517705|15517705|15517705|15515776|15517705 15518751|15518751|15518751|15518751|15518577 TGTGTTC 7mer-m8 dme-miR-317-3p 2R - 15518102 15518215 3'utr Khc-73 FlyBase G17886.1 TGATTCCATTGTTTTGTGTTCGTGTAGTTAATTGTCGTTTTTTGCTTTTCGATTTTGGAATGAAGCGTTTTACTGATATATTTTCTAATGGTTCTTTGCCTTTAGTTTAGTTAA 21 15518202 0.984626508 10 20 248 0.961538462 1.397940009 0.115384615 0.238095238 0.384615385 21 1 0 25 2R:15518102-15518215 7 11 1211 FBgn0019968 1323.716667 22.35333333 34.32 0.008309935 0.49209663 0.320512821 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 15562855 15562861 - 2R_15562855_15562861_- 0.754178793 0.754178699 0.754178746 7.07E-08 CG8195 FBtr0087353|FBtr0087353|FBtr0087353 15562695|15562695|15562695 15563163|15563163|15563163 2R - 15562828 15562887 3'utr CG8195 FlyBase G23655.2 TAGATCCCACGAATACCGTTTATCTATGTGATAGTCTACAACGTTTTGCTGAACTCCACC 22 15562865 0.989705506 6 18 194 0.888888889 1.380211242 0.481481481 0.227272727 0.37037037 22 3 0 24 2R:15562828-15562887 7 CG8195 FBtr0087353|FBtr0087353|FBtr0087353 15562695|15562695|15562695 15563163|15563163|15563163 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 15562848 15562890 3'utr CG8195 FlyBase G17905.1 CTTTAGATCCCACGAATACCGTTTATCTATGTGATAGTCTACA 17 15562864 0.992582069 3 13 153 0.8 1 0.44 0.411764706 0.6 17 4 1 20 2R:15562848-15562890 7 17 1212 FBgn0034032 150.0733333 7.953333333 12.14666667 0.113277953 2.137468567 1.399560922 4 3 3.5 0.1 dme-miR-965-3p 6mer3-8 TACGCT 2R 15566490 15566495 - 2R_15566490_15566495_- 0.999991178 0.999998967 0.999995073 5.52E-06 Flo1 FBtr0087351|FBtr0087352 15566269|15566269 15566573|15566573 2R - 15566438 15566514 3'utr Flo1 FlyBase G23661.1 AAGAAAACAAAAAAGAAATTACGCTATATTGAACGATCGAATACTTCAAAACTGAAATCGAACGCATTTAAATTTCT 34 15566496 0.96756181 6 32 177 0.955555556 1.633468456 0.022222222 0.235294118 0.422222222 34 2 0 43 2R:15566438-15566514 6 Flo1 FBtr0087351|FBtr0087352 15566269|15566269 15566573|15566573 TACGCT 6mer3-8 dme-miR-965-3p 2R - 15566457 15566508 3'utr Flo1 FlyBase G17910.1 ACAAAAAAGAAATTACGCTATATTGAACGATCGAATACTTCAAAACTGAAAT 26 15566495 0.929498394 5 25 135 0.96969697 1.505149978 0.03030303 0.230769231 0.393939394 26 1 0 32 2R:15566457-15566508 6 27.5 1213 FBgn0024754 1484.76 99.31333333 151.9633333 0.018521512 0.27690139 0.180964706 1 0 0.5 0.1 dme-miR-1007-3p 6mer3-8 TGAGCT 2R 15569895 15569900 - 2R_15569895_15569900_- 0.999999473 0.999662279 0.999830876 0.000238436 Cdk5 FBtr0087350 15569526 15570131 2R - 15569873 15569934 3'utr Cdk5 FlyBase G23670.1 AATCCCTACCAATGTGACACTTAATATAGCCATTTGAGCTGCCAAATTAACATTTATCGATA 30 15569901 0.964499519 7 29 199 0.947368421 1.556302501 0.026315789 0.266666667 0.421052632 30 2 0 36 2R:15569873-15569934 6 Cdk5 FBtr0087350 15569526 15570131 TGAGCT 6mer3-8 dme-miR-1007-3p 2R - 15569884 15569935 3'utr Cdk5 FlyBase G17916.1 CAATCCCTACCAATGTGACACTTAATATAGCCATTTGAGCTGCCAAATTAAC 17 15569901 0.968412684 4 16 94 1 1.414973348 0.038461538 0.5 0.692307692 16 0 0 26 2R:15569884-15569935 6 20 1214 FBgn0013762 182.3333333 13.78 20.92333333 0.109689214 1.45137881 0.955870639 1 1 1 0.1 dme-miR-14-3p 7mer-A1 AGACTGA 2R 15572953 15572959 + 2R_15572953_15572959_+ 0.820923495 0.806885167 0.813904331 0.009926577 CG30466 FBtr0340004|FBtr0087339 15572925|15572925 15573170|15573170 2R + 15572941 15572964 3'utr CG30466 FlyBase G16152.1 GAACGAAGCTGTAGACTGATGACT 23 15572960 0.649982143 3 22 73 0.970588235 1.217483944 0.029411765 0.347826087 0.558823529 23 0 1 33 2R:15572941-15572964 7 CG30466 FBtr0087339|FBtr0340004 15572925|15572925 15573170|15573170 AGACTGA 7mer-A1 dme-miR-14-3p 2R + 15572941 15572965 3'utr CG30466 FlyBase G12258.1 GAACGAAGCTGTAGACTGATGACTA 18 15572960 0.660615026 3 17 64 0.928571429 0.937852093 0 0.5 0.678571429 18 0 2 26 2R:15572941-15572965 7 20 1215 FBgn0050466 280.3266667 17.32333333 26.4 0.071345335 1.154512219 0.757575758 -7 -7 -7 0.1 dme-miR-92b-3p 7mer-m1 TGCAATT 2R 15763056 15763062 - 2R_15763056_15763062_- 0.709625045 0.765586663 0.737605854 0.039570898 Zasp52 FBtr0310088|FBtr0301313|FBtr0310087|FBtr0310086|FBtr0329913|FBtr0329915|FBtr0111048|FBtr0100387|FBtr0087315|FBtr0329914|FBtr0329916|FBtr0342711|FBtr0100388|FBtr0329912|FBtr0329911 15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563 15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192 2R - 15763027 15763123 3'utr Zasp52 FlyBase G23686.1 AGAATCTTCGGATTACTTGGATACGGGAGCTTGCTCCCAACTCGTATCTAATGCTTATTATTGCAATTGTCAGAGTGAATAATGCGTAACTATTATT 15 15763069 0.976960763 9 15 108 1 1.204119983 0.125 0.066666667 0.125 15 0 0 16 2R:15763027-15763123 7 Zasp52 FBtr0329912|FBtr0100387|FBtr0329911|FBtr0329913|FBtr0329916|FBtr0310087|FBtr0100388|FBtr0310088|FBtr0329915|FBtr0111048|FBtr0087315|FBtr0329914|FBtr0301313|FBtr0342711|FBtr0310086 15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563 15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192 TGCAATT 7mer-m1 dme-miR-92b-3p 2R - 15763033 15763109 3'utr Zasp52 FlyBase G17924.1 ACTTGGATACGGGAGCTTGCTCCCAACTCGTATCTAATGCTTATTATTGCAATTGTCAGAGTGAATAATGCGTAACT 12 15763066 0.963067202 9 11 81 0.9 1.255272505 0.05 0.583333333 0.75 12 2 0 18 2R:15763033-15763109 7 6 1216 FBgn0265991 371.52 11.31333333 17.32 0.016149871 0.530347672 0.346420323 7 4 5.5 0.1 dme-miR-980-3p 6mer2-7 GCAGCT 2R 15854293 15854298 + 2R_15854293_15854298_+ 0.965628939 0.991774701 0.97870182 0.018487872 tun FBtr0308815|FBtr0308814 15853194|15853194 15854981|15855645 2R + 15854222 15854325 3'utr tun FlyBase G16210.1 CGTATCGTTTCCCCTTCGATTAATGACTTGTGACGCGCAAAGACTGATTCATTATACGCCCTACGGTAGCTGCAGCTCCTCTTCAAATGCCTCCTCGTGTTTTA 37 15854292 0.746358424 14 32 226 0.886363636 1.591064607 0.113636364 0.162162162 0.295454545 37 5 0 39 2R:15854222-15854325 6 tun FBtr0308815|FBtr0308814 15853194|15853194 15854981|15855645 GCAGCT 6mer2-7 dme-miR-980-3p 2R + 15854222 15854305 3'utr tun FlyBase G12305.1 CGTATCGTTTCCCCTTCGATTAATGACTTGTGACGCGCAAAGACTGATTCATTATACGCCCTACGGTAGCTGCAGCTCCTCTTC 17 15854269 0.972673941 6 15 97 0.923076923 1.079181246 0.076923077 0.352941176 0.576923077 17 1 1 24 2R:15854222-15854305 6 9.5 1217 FBgn0034046 647.0966667 28.77333333 44.19 0.01468096 0.330166821 0.214980765 1 24 12.5 0.1 dme-miR-277-3p 7mer-A1 GCATTTA 2R 15854420 15854426 + 2R_15854420_15854426_+ 0.823349439 0.781400237 0.802374838 0.029662564 tun FBtr0308815|FBtr0308814 15853194|15853194 15854981|15855645 2R + 15854409 15854461 3'utr tun FlyBase G16211.1 TAACGAAACTCGCATTTATTTATGATTCTCTGGCTTACACATTGATTTTTGAT 7 15854447 0.992180138 6 7 81 1 1 0 0.428571429 0.6 7 0 0 10 2R:15854409-15854461 7 tun FBtr0308815|FBtr0308814 15853194|15853194 15854981|15855645 GCATTTA 7mer-A1 dme-miR-277-3p 2R + 15854376 15854447 3'utr tun FlyBase G12306.1 TGTTCGGCTTCCAACCTTTAGACTCGGATTAGTTAACGAAACTCGCATTTATTTATGATTCTCTGGCTTACA 7 15854428 0.985872301 5 7 69 1 0.84509804 0.285714286 0 0 7 0 0 7 2R:15854376-15854447 7 4.5 1218 FBgn0034046 647.0966667 28.77333333 44.19 0.006954139 0.15639481 0.101832994 -27 -8 -17.5 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 15854560 15854565 + 2R_15854560_15854565_+ 0.998204782 0.998440091 0.998322436 0.000166382 tun FBtr0308815|FBtr0308814 15853194|15853194 15854981|15855645 2R + 15854550 15854581 3'utr tun FlyBase G16212.1 AAAAATAAATGCTGTGCAAAAGTCTCAAAGTT 7 15854559 0.76654153 3 7 34 1 1 0.1 0.428571429 0.6 7 0 0 10 2R:15854550-15854581 6 tun FBtr0308815|FBtr0308814 15853194|15853194 15854981|15855645 GCTGTG 6mer2-7 dme-miR-1008-3p 2R + 15854545 15854600 3'utr tun FlyBase G12307.1 TGTATAAAAATAAATGCTGTGCAAAAGTCTCAAAGTTAAACCTAAACTCTTAATTA 10 15854559 0.960943703 2 10 53 1 1.146128036 0.142857143 0.3 0.5 10 0 0 14 2R:15854545-15854600 6 7.5 1219 FBgn0034046 647.0966667 28.77333333 44.19 0.011590231 0.260658017 0.169721656 1 1 1 0.1 dme-miR-317-3p 8mer-A1 TGTGTTCA 2R 15869650 15869657 - 2R_15869650_15869657_- 0.63112883 0.631128817 0.631128824 0 sli FBtr0330732 15869493 15873378 2R - 15869633 15869703 3'utr sli FlyBase G23755.1 TTAACCTTTTTCCGGCGAAGCTTTCGACGGTTCACAGCCGCAAAATTGTGTTCAGCTAATTAATTAGGAAG 74 15869658 0.907520099 4 67 494 0.892857143 1.397940009 0.083333333 0.121621622 0.226190476 74 7 2 75 2R:15869633-15869703 8 sli FBtr0330732 15869493 15873378 TGTGTTCA 8mer-A1 dme-miR-317-3p 2R - 15869632 15869699 3'utr sli FlyBase G17980.1 CCTTTTTCCGGCGAAGCTTTCGACGGTTCACAGCCGCAAAATTGTGTTCAGCTAATTAATTAGGAAGA 38 15869658 0.979534386 4 36 242 0.967741935 1.477121255 0.14516129 0.394736842 0.629032258 38 1 1 60 2R:15869632-15869699 8 53.5 1220 FBgn0264089 1642.536667 21.12333333 32.62 0.032571571 2.532744201 1.640098099 1 1 1 0.1 dme-miR-8-3p 6mer2-7 AGTATT 2R 15870380 15870385 - 2R_15870380_15870385_- 0.999977235 1 0.999988617 1.61E-05 sli FBtr0330730|FBtr0330729|FBtr0330733|FBtr0330732|FBtr0330734|FBtr0330731 15870052|15870052|15870052|15869493|15870052|15870052 15873378|15873378|15873378|15873378|15871419|15873378 2R - 15870322 15870411 3'utr sli FlyBase G23762.1 TTTAGTCTAAGTTGCTCAAAGGATAAAGTATTTTGATAGAACCGGAAAGGATCGAGAAACAAACCAATAAACCACAAAGAATCGAATTGA 11 15870380 0.964979251 6 10 49 0.923076923 1.079181246 0.307692308 0.181818182 0.307692308 11 1 0 12 2R:15870322-15870411 6 sli FBtr0330734|FBtr0330731|FBtr0330733|FBtr0330732|FBtr0330730|FBtr0330729 15870052|15870052|15870052|15869493|15870052|15870052 15871419|15873378|15873378|15873378|15873378|15873378 AGTATT 6mer2-7 dme-miR-8-3p 2R - 15870356 15870411 3'utr sli FlyBase G17985.1 TTTAGTCTAAGTTGCTCAAAGGATAAAGTATTTTGATAGAACCGGAAAGGATCGAG 8 15870376 0.970534642 6 8 45 1 1.113943352 0 0.5 0.692307692 8 0 0 13 2R:15870356-15870411 6 4.5 1221 FBgn0264089 1642.536667 21.12333333 32.62 0.002739665 0.213034559 0.137952177 -5 -9 -7 0.1 dme-miR-282-5p 6mer2-7 GAGGCT 2R 15871318 15871323 - 2R_15871318_15871323_- 0.999976273 0.999807658 0.999891965 0.000119218 sli FBtr0330730|FBtr0330729|FBtr0330733|FBtr0330732|FBtr0330734|FBtr0330731 15870052|15870052|15870052|15869493|15870052|15870052 15873378|15873378|15873378|15873378|15871419|15873378 2R - 15871294 15871366 3'utr sli FlyBase G23768.1 AATCCCCGTTTCCTGCATCGTCATGATCATCATGCAGTCTATGGAGGCTGGCTAGCTGCCTTCGGGATGCAAG 60 15871325 0.834554045 5 59 393 0.985294118 1.826074803 0.147058824 0.1 0.205882353 60 1 0 67 2R:15871294-15871366 6 sli FBtr0330734|FBtr0330731|FBtr0330733|FBtr0330732|FBtr0330730|FBtr0330729 15870052|15870052|15870052|15869493|15870052|15870052 15871419|15873378|15873378|15873378|15873378|15873378 GAGGCT 6mer2-7 dme-miR-282-5p 2R - 15871242 15871393 3'utr sli FlyBase G17990.1 TGTCGAATGCCCCACATCCCCCCACCCAATCCCCGTTTCCTGCATCGTCATGATCATCATGCAGTCTATGGAGGCTGGCTAGCTGCCTTCGGGATGCAAGGTCCTTCTTCTACTACTAGCACTCATATACTCGAATATATACTCGTACTCGT 51 15871325 0.973084258 12 51 311 1 1.913813852 0.146341463 0.392156863 0.62195122 51 0 0 82 2R:15871242-15871393 6 33.5 1222 FBgn0264089 1642.536667 21.12333333 32.62 0.020395283 1.585923939 1.026977315 2 2 2 0.1 dme-miR-305-5p 7mer-m8 AGTACAA 2R 15871415 15871421 - 2R_15871415_15871421_- 0.643149463 0.643193659 0.643171561 3.13E-05 sli FBtr0330730|FBtr0330729|FBtr0330733|FBtr0330732|FBtr0330731 15870052|15870052|15870052|15869493|15870052 15873378|15873378|15873378|15873378|15873378 2R - 15871399 15871452 stop_codon sli FlyBase G23769.1 ATCCTCGATCAGCTGCGCATGATGCACTGGTAGTACAACAAGGGGGATTCGATT 89 15871422 0.789959357 6 82 461 0.915789474 1.638489257 0.231578947 0.06741573 0.126315789 89 7 1 87 2R:15871399-15871452 7 sli FBtr0330731|FBtr0330733|FBtr0330732|FBtr0330730|FBtr0330729 15870052|15870052|15869493|15870052|15870052 15873378|15873378|15873378|15873378|15873378 AGTACAA 7mer-m8 dme-miR-305-5p 2R - 15871400 15871442 stop_codon sli FlyBase G17991.1 AGCTGCGCATGATGCACTGGTAGTACAACAAGGGGGATTCGAT 26 15871422 0.760137251 4 23 123 0.918918919 1.531478917 0.243243243 0.346153846 0.540540541 26 3 0 34 2R:15871400-15871442 7 55 1223 FBgn0264089 1642.536667 21.12333333 32.62 0.033484793 2.60375572 1.686082158 1 1 1 0.1 dme-bantam-3p 6mer2-7 GATCTC 2R 15873130 15873135 - 2R_15873130_15873135_- 1 0.999992941 0.99999647 5.02E-06 sli FBtr0330730|FBtr0330729|FBtr0330733|FBtr0330732|FBtr0330731 15870052|15870052|15870052|15869493|15870052 15873378|15873378|15873378|15873378|15873378 2R - 15873057 15873284 3'utr sli FlyBase G23772.1 ATAGTAACGATAGTCTTAGCCATAGCACTAGGGATAGCACGGATGTTAGGGGGACGAAGGATGAAGCGGAGGAGAGTGCTGACGCGGGGGAGACAACGGAGGAGGTGAGGGACGAGAGTGATGATTACCCCACGGACGGCATGCAGTCCGATCTCTACGACGACACCATCGATGACGACGATGACGATGGTCTCGATGATGATTATGCAGACGAGGAGGATGGGGAGG 92 15873129 0.999981595 19 79 374 0.866071429 1.032529225 0.160714286 0.173913043 0.321428571 92 7 8 97 2R:15873057-15873284 6 sli FBtr0330731|FBtr0330733|FBtr0330732|FBtr0330730|FBtr0330729 15870052|15870052|15869493|15870052|15870052 15873378|15873378|15873378|15873378|15873378 GATCTC 6mer2-7 dme-bantam-3p 2R - 15873120 15873159 3'utr sli FlyBase G17993.1 TACCCCACGGACGGCATGCAGTCCGATCTCTACGACGACA 20 15873129 0.855016061 4 16 80 0.838709677 1.414973348 0.032258065 0.3 0.548387097 20 5 0 26 2R:15873120-15873159 6 33 1224 FBgn0264089 1642.536667 21.12333333 32.62 0.020090876 1.562253432 1.011649295 -6 -6 -6 0.1 dme-miR-1012-3p 6mer2-7 TGACTA 2R 15936199 15936204 - 2R_15936199_15936204_- 0.92053813 0.911904353 0.916221241 0.006104948 Mlf FBtr0087292|FBtr0306650|FBtr0302149|FBtr0087294|FBtr0087295|FBtr0087293|FBtr0306649 15935891|15935891|15935891|15935891|15935891|15935891|15936089 15936459|15936459|15937286|15936459|15936459|15938254|15936459 2R - 15936183 15936256 3'utr Mlf FlyBase G23841.1 GATGTGCACGCAGGATACAGAACAACTTGCTTAAATTTACTTAAAACAAATGTGACTATTCAACGCCGAAATCA 26 15936199 0.675114678 9 23 128 0.931034483 1.431363764 0.275862069 0.076923077 0.172413793 26 2 0 27 2R:15936183-15936256 6 Mlf FBtr0087293|FBtr0306649|FBtr0087294|FBtr0087295|FBtr0306650|FBtr0302149|FBtr0087292 15935891|15936089|15935891|15935891|15935891|15935891|15935891 15938254|15936459|15936459|15936459|15936459|15937286|15936459 TGACTA 6mer2-7 dme-miR-1012-3p 2R - 15936182 15936256 3'utr Mlf FlyBase G18057.1 GATGTGCACGCAGGATACAGAACAACTTGCTTAAATTTACTTAAAACAAATGTGACTATTCAACGCCGAAATCAT 15 15936200 0.960857502 6 14 75 1 1.431363764 0.222222222 0.666666667 0.814814815 15 0 0 27 2R:15936182-15936256 6 14.5 1225 FBgn0034051 2421.99 180.2466667 275.5966667 0.005986812 0.080445316 0.052613118 -5 -4 -4.5 0.1 dme-miR-970-3p 6mer3-8 TCTTAT 2R 15936314 15936319 - 2R_15936314_15936319_- 0.9998728 0.999874528 0.999873664 1.20E-06 Mlf FBtr0087292|FBtr0306650|FBtr0302149|FBtr0087294|FBtr0087295|FBtr0087293|FBtr0306649 15935891|15935891|15935891|15935891|15935891|15935891|15936089 15936459|15936459|15937286|15936459|15936459|15938254|15936459 2R - 15936305 15936346 3'utr Mlf FlyBase G23842.1 AACAAACACAATTCTTTACCAGTTCTGTCTTATCCTGCGTGA 14 15936324 0.947104158 5 9 127 0.777777778 0.84509804 0 0.142857143 0.333333333 14 3 1 14 2R:15936305-15936346 6 Mlf FBtr0087293|FBtr0306649|FBtr0087294|FBtr0087295|FBtr0306650|FBtr0302149|FBtr0087292 15935891|15936089|15935891|15935891|15935891|15935891|15935891 15938254|15936459|15936459|15936459|15936459|15937286|15936459 TCTTAT 6mer3-8 dme-miR-970-3p 2R - 15936304 15936337 3'utr Mlf FlyBase G18058.1 AATTCTTTACCAGTTCTGTCTTATCCTGCGTGAG 10 15936317 0.606502231 3 10 91 1 1.146128036 0 0.4 0.571428571 10 0 0 14 2R:15936304-15936337 6 11 1226 FBgn0034051 2421.99 180.2466667 275.5966667 0.00454172 0.061027481 0.0399134 5 -2 1.5 0.1 dme-miR-7-5p 6mer3-8 GTCTTC 2R 15937182 15937187 - 2R_15937182_15937187_- 0.999406511 0.999911991 0.999659251 0.000357442 Mlf FBtr0306651|FBtr0302149 15936692|15935891 15937286|15937286 2R - 15937145 15937210 3'utr Mlf FlyBase G23844.1 CGAGAAACACTCGACATTCGGCTGTCTTCGACGTAACTACATGCACTCTACTAACCGAAGGCGCCA 11 15937184 0.971439361 5 11 63 1 1.176091259 0.266666667 0.363636364 0.533333333 11 0 0 15 2R:15937145-15937210 6 Mlf FBtr0302149|FBtr0306651 15935891|15936692 15937286|15937286 GTCTTC 6mer3-8 dme-miR-7-5p 2R - 15937153 15937209 3'utr Mlf FlyBase G18060.1 GAGAAACACTCGACATTCGGCTGTCTTCGACGTAACTACATGCACTCTACTAACCGA 9 15937184 0.975207404 4 8 51 0.923076923 1.079181246 0.153846154 0.333333333 0.538461538 9 1 0 12 2R:15937153-15937209 6 8.5 1227 FBgn0034051 2421.99 180.2466667 275.5966667 0.003509511 0.047157599 0.030842173 -3 -3 -3 0.1 dme-miR-252-5p 7mer-m8 GTACTTA 2R 15989698 15989704 - 2R_15989698_15989704_- 0.524216791 0.584452689 0.55433474 0.042593213 CG8314 FBtr0087268 15989681 15989940 2R - 15989685 15989736 3'utr CG8314 FlyBase G23862.1 AAATATCCATTTCCGTGGCCGGGTGAAGATGTGTACTTACCTGACAGCCCTA 21 15989702 0.973605614 4 20 126 1 1.397940009 0.36 0.19047619 0.32 21 0 0 25 2R:15989685-15989736 7 CG8314 FBtr0087268 15989681 15989940 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 15989683 15989727 3'utr CG8314 FlyBase G18068.1 TTTCCGTGGCCGGGTGAAGATGTGTACTTACCTGACAGCCCTACT 17 15989705 0.706773237 6 16 109 0.896551724 1.414973348 0.344827586 0.529411765 0.724137931 17 3 0 26 2R:15989683-15989727 7 17.5 1228 FBgn0034057 362 35.10666667 54.10333333 0.048342541 0.49848082 0.323455117 -2 1 -0.5 0.1 dme-miR-277-3p 6mer2-7 GCATTT 2R 15993562 15993567 + 2R_15993562_15993567_+ 0.996065343 0.992938777 0.99450206 0.002210769 CG8320 FBtr0087202 15993411 15993707 2R + 15993543 15993586 3'utr CG8320 FlyBase G16234.1 ATTGTTTTAGTTAGTCAAAGCATTTGTGCGATTTAATTGCGGTG 14 15993567 0.725176804 5 13 132 0.933333333 0.84509804 0.266666667 0.071428571 0.133333333 14 0 1 14 2R:15993543-15993586 6 CG8320 FBtr0087202 15993411 15993707 GCATTT 6mer2-7 dme-miR-277-3p 2R + 15993543 15993580 3'utr CG8320 FlyBase G12325.1 ATTGTTTTAGTTAGTCAAAGCATTTGTGCGATTTAATT 8 15993566 0.853755233 3 8 74 1 1.204119983 0 0.5 0.75 8 0 0 16 2R:15993543-15993580 6 11 1229 FBgn0034059 68.78 8.71 13.22666667 0.159930212 1.262916188 0.831653226 -5 -4 -4.5 0.1 dme-miR-999-3p 6mer3-8 AGTTAA 2R 15994141 15994146 - 2R_15994141_15994146_- 0.999999986 0.999999998 0.999999992 0 ATPCL FBtr0340016|FBtr0300598|FBtr0300596|FBtr0300597 15993801|15993801|15993801|15993529 15994227|15994227|15994227|15994227 2R - 15994111 15994160 3'utr ATPCL FlyBase G23872.1 TCGGAAGTTGTTGTAGTTAAGCACAGATGTATGATGTTAGGCAAAGAGGT 13 15994150 0.943904136 5 12 76 1 1.176091259 0.266666667 0.153846154 0.266666667 13 0 0 15 2R:15994111-15994160 6 ATPCL FBtr0300597|FBtr0300596|FBtr0300598|FBtr0340016 15993529|15993801|15993801|15993801 15994227|15994227|15994227|15994227 AGTTAA 6mer3-8 dme-miR-999-3p 2R - 15994102 15994164 3'utr ATPCL FlyBase G18076.1 TTATTCGGAAGTTGTTGTAGTTAAGCACAGATGTATGATGTTAGGCAAAGAGGTCACCCGCTC 11 15994124 0.776302388 5 10 74 1 1.176091259 0.333333333 0.272727273 0.466666667 11 0 0 15 2R:15994102-15994164 6 7.5 1230 FBgn0020236 1766.27 52.70333333 80.88666667 0.004246236 0.14230599 0.092722328 4 -22 -9 0.1 dme-bantam-3p 6mer3-8 TGATCT 2R 16006847 16006852 + 2R_16006847_16006852_+ 0.558033996 0.999797666 0.778915831 0.312374108 CG8370 FBtr0087203|FBtr0340015 16006745|16006745 16006901|16006901 2R + 16006823 16006888 3'utr CG8370 FlyBase G16244.2 ACGCGACGATGGAGGAACGCTGAATGATCTTTTCCAATTTGACTTTTGACTAATAAACGCAAAGAT 85 16006847 0.744385576 11 82 600 0.944954128 2.012837225 0.064220183 0.235294118 0.403669725 85 6 0 103 2R:16006823-16006888 6 CG8370 FBtr0087203|FBtr0340015 16006745|16006745 16006901|16006901 TGATCT 6mer3-8 dme-bantam-3p 2R + 16006824 16006884 3'utr CG8370 FlyBase G12328.1 CGCGACGATGGAGGAACGCTGAATGATCTTTTCCAATTTGACTTTTGACTAATAAACGCAA 55 16006847 0.768294812 11 54 380 0.988372093 1.62838893 0.034883721 0.454545455 0.651162791 55 0 1 85 2R:16006824-16006884 6 57 1231 FBgn0034060 699.34 15.97 24.45666667 0.081505419 3.569192235 2.330652855 0 0 0 0.1 dme-miR-307a-3p 7mer-A1 GTTGTGA 2R 16013663 16013669 + 2R_16013663_16013669_+ 0.823248848 0.822627131 0.82293799 0.000439608 CG8389 FBtr0087205|FBtr0087204 16013535|16013535 16013815|16013815 2R + 16013635 16013681 3'utr CG8389 FlyBase G16251.1 TTCCACTCTCGCCGCAGTAGTTATCTGAGTTGTGAGGAAGGACCAGT 10 16013658 0.971705354 6 10 62 1 1.079181246 0.416666667 0.1 0.25 10 0 0 12 2R:16013635-16013681 7 CG8389 FBtr0087205|FBtr0087204 16013535|16013535 16013815|16013815 GTTGTGA 7mer-A1 dme-miR-307a-3p 2R + 16013635 16013687 3'utr CG8389 FlyBase G12335.1 TTCCACTCTCGCCGCAGTAGTTATCTGAGTTGTGAGGAAGGACCAGTGTCAGG 9 16013660 0.96877785 6 9 53 1 1.146128036 0.5 0.444444444 0.642857143 9 0 0 14 2R:16013635-16013687 7 8 1232 FBgn0034063 106.9966667 6.81 10.28666667 0.074768684 1.174743025 0.777705768 5 3 4 0.1 dme-miR-34-5p 7mer-A1 ACTGCCA 2R 16013773 16013779 + 2R_16013773_16013779_+ 0.687620529 0.727906096 0.707763312 0.028486221 CG8389 FBtr0087205|FBtr0087204 16013535|16013535 16013815|16013815 2R + 16013750 16013792 3'utr CG8389 FlyBase G16252.1 TAGCCCCTAGACCTAACTTTTGTACTGCCATAAGAGCCAAAAT 20 16013770 0.915043189 7 19 143 0.956521739 1.041392685 0.043478261 0.15 0.260869565 20 0 1 22 2R:16013750-16013792 7 CG8389 FBtr0087205|FBtr0087204 16013535|16013535 16013815|16013815 ACTGCCA 7mer-A1 dme-miR-34-5p 2R + 16013749 16013789 3'utr CG8389 FlyBase G12336.1 TTAGCCCCTAGACCTAACTTTTGTACTGCCATAAGAGCCAA 15 16013770 0.785004705 5 14 109 0.952380952 1.301029996 0.047619048 0.333333333 0.523809524 15 1 0 20 2R:16013749-16013789 7 17 1233 FBgn0034063 106.9966667 6.81 10.28666667 0.158883454 2.496328928 1.652624757 3 3 3 0.1 dme-miR-79-3p 8mer-A1 TAGCTTTA 2R 16060133 16060140 + 2R_16060133_16060140_+ 0.625364009 0.625364009 0.625364009 0 CG8405 FBtr0340020 16059325 16060835 2R + 16060091 16060163 3'utr CG8405 FlyBase G16263.1 GCCTCCACTGATGCTTCTACTGTTTGCCCAAGCTCTTTGCTTTAGCTTTATGGAATACCATAGGATTGTCAAC 11 16060130 0.991243007 5 9 103 0.9375 1.176091259 0.125 0.272727273 0.5 11 1 0 15 2R:16060091-16060163 8 CG8405 FBtr0340020 16059325 16060835 TAGCTTTA 8mer-A1 dme-miR-79-3p 2R + 16060100 16060174 3'utr CG8405 FlyBase G12340.2 GATGCTTCTACTGTTTGCCCAAGCTCTTTGCTTTAGCTTTATGGAATACCATAGGATTGTCAACTGTAATATATT 11 16060132 0.985149209 7 11 114 1 1.113943352 0.461538462 0.181818182 0.307692308 11 0 0 13 2R:16060100-16060174 8 7 1234 FBgn0034071 1286.916667 39.81333333 61.00666667 0.005439358 0.175820496 0.114741558 3 1 2 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 16060256 16060261 + 2R_16060256_16060261_+ 0.977256431 0.955746728 0.96650158 0.015209655 CG8405 FBtr0340020|FBtr0340020|FBtr0340020 16059325|16059325|16059325 16060835|16060835|16060835 2R + 16060246 16060289 3'utr CG8405 FlyBase G16264.1 AGGAAACACACTGTGAATATTCATGAGAAATTGCCGTTGAACGT 9 16060264 0.953622573 3 8 38 1 0.954242509 0 0 0 9 0 0 9 2R:16060246-16060289 6 CG8405 FBtr0340020|FBtr0340020|FBtr0340020 16059325|16059325|16059325 16060835|16060835|16060835 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 16060233 16060267 3'utr CG8405 FlyBase G12341.1 AAAGCCATCACAAAGGAAACACACTGTGAATATTC 6 16060263 0.950266638 2 6 25 1 1.113943352 0 0.666666667 0.846153846 6 0 0 13 2R:16060233-16060267 6 6.5 1235 FBgn0034071 1286.916667 39.81333333 61.00666667 0.005050832 0.163261889 0.106545733 -8 -7 -7.5 0.1 dme-miR-184-3p 6mer2-7 CCGTCC 2R 16082067 16082072 - 2R_16082067_16082072_- 0.541155266 0.953196644 0.747175955 0.291357197 Dg FBtr0306238|FBtr0087256|FBtr0087258|FBtr0087257 16081174|16081665|16081665|16081665 16083271|16083271|16083271|16083271 2R - 16081986 16082137 3'utr Dg FlyBase G23940.1 ATGTAGCTGCTAGTTGGGCAGTACTTACTACACTACTACCTACTACTATCTACTACCTAATCCAACCGTCCCTTATCCCTGAATCGAACTAACATGTAGTGAGTAAAGCATTGATTTTATATGAACTTATAGTGGAAGTCCAGAGCCTAAGT 29 16082064 0.983456213 14 25 198 0.848484848 1.146128036 0.060606061 0.137931034 0.242424242 29 4 1 28 2R:16081986-16082137 6 Dg FBtr0087258|FBtr0087257|FBtr0306238|FBtr0087256 16081665|16081665|16081174|16081665 16083271|16083271|16083271|16083271 CCGTCC 6mer2-7 dme-miR-184-3p 2R - 16082015 16082089 3'utr Dg FlyBase G18122.1 TCTACTACCTAATCCAACCGTCCCTTATCCCTGAATCGAACTAACATGTAGTGAGTAAAGCATTGATTTTATATG 12 16082064 0.84238356 7 11 77 1 1.204119983 0.125 0.25 0.4375 12 0 0 16 2R:16082015-16082089 6 12 1236 FBgn0034072 2596.65 61.60333333 94.99 0.004621339 0.194794654 0.126329087 -8 -8 -8 0.1 dme-miR-980-3p 8mer-A1 GGCAGCTA 2R 16082658 16082665 - 2R_16082658_16082665_- 0.668733879 0.668731165 0.668732522 1.91E-06 Dg FBtr0306238|FBtr0087256|FBtr0087258|FBtr0087257 16081174|16081665|16081665|16081665 16083271|16083271|16083271|16083271 2R - 16082618 16082676 3'utr Dg FlyBase G23943.1 CCACGTCCCTGGGCAGCTATTAGACTTTCAGCTTGATTTGCTCAAGCTGAATTGCTTGC 31 16082657 0.841091109 6 29 179 0.947368421 1.255272505 0.236842105 0.193548387 0.342105263 31 1 1 36 2R:16082618-16082676 8 Dg FBtr0087258|FBtr0087257|FBtr0306238|FBtr0087256 16081665|16081665|16081174|16081665 16083271|16083271|16083271|16083271 GGCAGCTA 8mer-A1 dme-miR-980-3p 2R - 16082619 16082676 3'utr Dg FlyBase G18123.1 CCACGTCCCTGGGCAGCTATTAGACTTTCAGCTTGATTTGCTCAAGCTGAATTGCTTG 28 16082657 0.739482349 6 26 155 0.944444444 1.531478917 0.027777778 0.285714286 0.444444444 28 2 0 34 2R:16082619-16082676 8 25.5 1237 FBgn0034072 2596.65 61.60333333 94.99 0.009820345 0.41393864 0.26844931 -8 -8 -8 0.1 dme-miR-999-3p 6mer3-8 AGTTAA 2R 16082709 16082714 - 2R_16082709_16082714_- 0.99999968 0.999990215 0.999994948 6.72E-06 Dg FBtr0306238|FBtr0087256|FBtr0087258|FBtr0087257 16081174|16081665|16081665|16081665 16083271|16083271|16083271|16083271 2R - 16082692 16082726 3'utr Dg FlyBase G23944.1 GTACTAAAATTAAGTTAAACGCGAGAAAGAAGGCA 9 16082712 0.931765806 3 7 27 0.888888889 0.903089987 0.111111111 0 0 9 1 0 8 2R:16082692-16082726 6 Dg FBtr0087258|FBtr0087257|FBtr0306238|FBtr0087256 16081665|16081665|16081174|16081665 16083271|16083271|16083271|16083271 AGTTAA 6mer3-8 dme-miR-999-3p 2R - 16082693 16082724 3'utr Dg FlyBase G18124.1 ACTAAAATTAAGTTAAACGCGAGAAAGAAGGC 5 16082711 0.961968141 2 3 14 0.857142857 0.77815125 0.285714286 0.4 0.571428571 5 1 0 6 2R:16082693-16082724 6 6.5 1238 FBgn0034072 2596.65 61.60333333 94.99 0.002503225 0.105513771 0.068428256 -2 -3 -2.5 0.1 dme-miR-1007-3p 6mer3-8 TGAGCT 2R 16106266 16106271 + 2R_16106266_16106271_+ 0.999974184 0.720909986 0.860442085 0.197328188 Rho1 FBtr0087214|FBtr0087216|FBtr0087211|FBtr0087212|FBtr0087213|FBtr0087217 16106050|16106050|16106050|16106050|16106050|16106050 16106489|16107229|16106489|16107229|16107229|16107229 2R + 16106238 16106377 3'utr Rho1 FlyBase G16277.1 AACAAACATGAGCAGAAAACAGAGAGCTTGAGCTAGAAGATCAGCGGAGGAGGGATGCAGCGAGATATAAGGGAAGGCAGCACCAAGTAGAATGTCAAATGCGGATTTGATTTTATATACAGTCTAGTGTAGTTATAAAC 33 16106278 0.960980034 16 32 156 0.975609756 1.602059991 0.341463415 0.151515152 0.317073171 33 1 0 40 2R:16106238-16106377 6 Rho1 FBtr0087211|FBtr0087212|FBtr0087213|FBtr0087217|FBtr0087214|FBtr0087216 16106050|16106050|16106050|16106050|16106050|16106050 16106489|16107229|16107229|16107229|16106489|16107229 TGAGCT 6mer3-8 dme-miR-1007-3p 2R + 16106257 16106303 3'utr Rho1 FlyBase G12353.1 CAGAGAGCTTGAGCTAGAAGATCAGCGGAGGAGGGATGCAGCGAGAT 11 16106278 0.906236215 3 11 18 1 1.176091259 0.466666667 0.363636364 0.533333333 11 0 0 15 2R:16106257-16106303 6 8 1239 FBgn0014020 13816.13667 1325.1 2048.813333 0.000579033 0.00603728 0.003904699 -12 -12 -12 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2R 16106360 16106365 + 2R_16106360_16106365_+ 0.99999525 0.999999806 0.999997528 3.18E-06 Rho1 FBtr0087214|FBtr0087216|FBtr0087211|FBtr0087212|FBtr0087213|FBtr0087217 16106050|16106050|16106050|16106050|16106050|16106050 16106489|16107229|16106489|16107229|16107229|16107229 2R + 16106238 16106377 3'utr Rho1 FlyBase G16277.1 AACAAACATGAGCAGAAAACAGAGAGCTTGAGCTAGAAGATCAGCGGAGGAGGGATGCAGCGAGATATAAGGGAAGGCAGCACCAAGTAGAATGTCAAATGCGGATTTGATTTTATATACAGTCTAGTGTAGTTATAAAC 33 16106343 0.960980034 16 32 156 0.975609756 1.602059991 0.341463415 0.151515152 0.317073171 33 1 0 40 2R:16106238-16106377 6 Rho1 FBtr0087211|FBtr0087212|FBtr0087213|FBtr0087217|FBtr0087214|FBtr0087216 16106050|16106050|16106050|16106050|16106050|16106050 16106489|16107229|16107229|16107229|16106489|16107229 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 16106312 16106380 3'utr Rho1 FlyBase G12354.1 AGGCAGCACCAAGTAGAATGTCAAATGCGGATTTGATTTTATATACAGTCTAGTGTAGTTATAAACCGA 9 16106338 0.979705776 6 9 67 1 1.041392685 0 0.222222222 0.363636364 9 0 0 11 2R:16106312-16106380 6 4.5 1240 FBgn0014020 13816.13667 1325.1 2048.813333 0.000325706 0.00339597 0.002196393 17 22 19.5 0.1 dme-miR-980-5p 7mer-m1 AAAAACT 2R 16106418 16106424 + 2R_16106418_16106424_+ 0.765586663 0.765586657 0.76558666 0 Rho1 FBtr0087214|FBtr0087216|FBtr0087211|FBtr0087212|FBtr0087213|FBtr0087217 16106050|16106050|16106050|16106050|16106050|16106050 16106489|16107229|16106489|16107229|16107229|16107229 2R + 16106385 16106452 3'utr Rho1 FlyBase G16278.1 AACAACAGTAATAACTCTGGCATTATTATTTGTAAAAACTAGGGCAGAGCAGATCAATCAGTCAGCCA 11 16106402 0.979376616 9 11 71 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 2R:16106385-16106452 7 Rho1 FBtr0087211|FBtr0087212|FBtr0087213|FBtr0087217|FBtr0087214|FBtr0087216 16106050|16106050|16106050|16106050|16106050|16106050 16106489|16107229|16107229|16107229|16106489|16107229 AAAAACT 7mer-m1 dme-miR-980-5p 2R + 16106386 16106438 3'utr Rho1 FlyBase G12355.1 ACAACAGTAATAACTCTGGCATTATTATTTGTAAAAACTAGGGCAGAGCAGAT 6 16106403 0.967776752 4 5 32 1 1 0 0.5 0.7 6 0 0 10 2R:16106386-16106438 7 3.5 1241 FBgn0014020 13816.13667 1325.1 2048.813333 0.000253327 0.00264131 0.001708306 16 15 15.5 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 16106575 16106580 + 2R_16106575_16106580_+ 0.999997327 0.999999971 0.999998649 1.91E-06 Rho1 FBtr0087216|FBtr0087212|FBtr0087213|FBtr0087217 16106050|16106050|16106050|16106050 16107229|16107229|16107229|16107229 2R + 16106556 16106623 3'utr Rho1 FlyBase G16280.1 GTTGTCAAGTGTAGAGTCGGCTGTGGCTGGACGAGATTGTGTCGTATGCGAGGGTGAGTGAGTCAGGT 12 16106572 0.982148918 6 9 66 0.769230769 0.698970004 0.692307692 0.083333333 0.153846154 12 2 1 10 2R:16106556-16106623 6 Rho1 FBtr0087212|FBtr0087213|FBtr0087217|FBtr0087216 16106050|16106050|16106050|16106050 16107229|16107229|16107229|16107229 GCTGTG 6mer2-7 dme-miR-1008-3p 2R + 16106531 16106592 3'utr Rho1 FlyBase G12357.1 TGTATGTTATTATTTCGTTAACTGTGTTGTCAAGTGTAGAGTCGGCTGTGGCTGGACGAGAT 6 16106565 0.970215811 3 6 46 1 1.113943352 0.615384615 0.5 0.769230769 6 0 0 13 2R:16106531-16106592 6 6.5 1242 FBgn0014020 13816.13667 1325.1 2048.813333 0.000470464 0.00490529 0.003172568 3 10 6.5 0.1 dme-miR-2a-2-5p 7mer-A1 GATGAGA 2R 16106703 16106709 + 2R_16106703_16106709_+ 0.782911824 0.782911824 0.782911824 0 Rho1 FBtr0087216|FBtr0087212|FBtr0087213|FBtr0087217 16106050|16106050|16106050|16106050 16107229|16107229|16107229|16107229 2R + 16106650 16106732 3'utr Rho1 FlyBase G16281.1 GGAAACGGAATCGGATGTTGGATCCCGGGGTCCAAGGAGGTCGTAGGCGTCAAGATGAGAGTTATGTTCCCATTAAATCTATC 12 16106705 0.983969879 8 11 79 0.923076923 0.77815125 0.153846154 0.083333333 0.153846154 12 0 1 12 2R:16106650-16106732 7 Rho1 FBtr0087212|FBtr0087213|FBtr0087217|FBtr0087216 16106050|16106050|16106050|16106050 16107229|16107229|16107229|16107229 GATGAGA 7mer-A1 dme-miR-2a-2-5p 2R + 16106668 16106758 3'utr Rho1 FlyBase G12358.1 TGGATCCCGGGGTCCAAGGAGGTCGTAGGCGTCAAGATGAGAGTTATGTTCCCATTAAATCTATCAAATACAGAGAGACCAGGCCGCCAAT 12 16106714 0.975307998 5 10 72 1 1.255272505 0.111111111 0.416666667 0.611111111 12 0 0 18 2R:16106668-16106758 7 7.5 1243 FBgn0014020 13816.13667 1325.1 2048.813333 0.000542844 0.00565995 0.003660656 -2 -11 -6.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 2R 16107213 16107218 + 2R_16107213_16107218_+ 0.999999654 0.999999896 0.999999775 1.41E-07 Rho1 FBtr0087216|FBtr0087212|FBtr0087213|FBtr0087217 16106050|16106050|16106050|16106050 16107229|16107229|16107229|16107229 2R + 16107117 16107231 3'utr Rho1 FlyBase G16285.1 ACCGTCAATCGTGTAATTCTCACACAGAAGTTGAAAAACTCGAAGATGCATCAGATACAACCAAACTATATTATACTTATGAATAAACAGTACATTTGATCTACTCTTGGTTTAA 32 16107212 0.984671253 13 31 248 0.975609756 1.602059991 0.219512195 0.28125 0.43902439 32 1 0 40 2R:16107117-16107231 6 Rho1 FBtr0087212|FBtr0087213|FBtr0087217|FBtr0087216 16106050|16106050|16106050|16106050 16107229|16107229|16107229|16107229 TGATCT 6mer3-8 dme-bantam-3p 2R + 16107179 16107225 3'utr Rho1 FlyBase G12360.1 AAACTATATTATACTTATGAATAAACAGTACATTTGATCTACTCTTG 12 16107212 0.98813775 6 10 93 0.8 1.079181246 0.066666667 0.25 0.4 12 3 0 12 2R:16107179-16107225 6 15 1244 FBgn0014020 13816.13667 1325.1 2048.813333 0.001085687 0.0113199 0.007321311 1 1 1 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2R 16107496 16107501 - 2R_16107496_16107501_- 0.999999562 0.948730981 0.974365271 0.036252375 Ric FBtr0087254 16107438 16108756 2R - 16107462 16107512 3'utr Ric FlyBase G23955.1 CGAAAACGACATACCTGTTCGGGAATAATATTGTGAAACCTAATACCTAAT 19 16107495 0.822576001 4 15 102 0.826086957 0.977723605 0.260869565 0.210526316 0.347826087 19 3 1 19 2R:16107462-16107512 6 Ric FBtr0087254 16107438 16108756 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2R - 16107472 16107512 3'utr Ric FlyBase G18132.1 CGAAAACGACATACCTGTTCGGGAATAATATTGTGAAACCT 18 16107496 0.665813151 3 18 83 1 1.462397998 0.172413793 0.444444444 0.655172414 18 0 0 29 2R:16107472-16107512 6 13.5 1245 FBgn0265605 681.3433333 39.13333333 60.19 0.019813799 0.344974446 0.224289749 -6 -5 -5.5 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 2R 16107996 16108002 - 2R_16107996_16108002_- 0.620184352 0.620170406 0.620177379 9.90E-06 Ric FBtr0300576|FBtr0087254 16107675|16107438 16108756|16108756 2R - 16107979 16108038 3'utr Ric FlyBase G23957.2 AAGCCCAAATTGATAATTTAAGTCCACGACAGCCGATGCATTTGTTGTTTAAGTTTGAGA 36 16107998 0.840768139 6 35 227 0.957446809 1.653212514 0.085106383 0.222222222 0.404255319 36 2 0 45 2R:16107979-16108038 7 Ric FBtr0300576|FBtr0087254 16107675|16107438 16108756|16108756 TGCATTT 7mer-m8 dme-miR-277-3p 2R - 16107982 16108019 3'utr Ric FlyBase G18134.1 AAGTCCACGACAGCCGATGCATTTGTTGTTTAAGTTTG 31 16107998 0.664441808 5 31 157 1 1.716003344 0.057692308 0.483870968 0.692307692 31 0 0 52 2R:16107982-16108019 7 31.5 1246 FBgn0265605 681.3433333 39.13333333 60.19 0.046232198 0.804940375 0.523342748 -4 -4 -4 0.1 dme-miR-278-3p 7mer-A1 CCACCGA 2R 16136242 16136248 + 2R_16136242_16136248_+ 0.816541367 0.81062035 0.813580858 0.004186779 spin FBtr0089589 16136204 16138238 2R + 16136217 16136254 3'utr spin FlyBase G16292.1 AAGAACCCCAGCGACTCTGGACTGACCACCGAGCTGCG 12 16136234 0.903867761 3 11 34 0.916666667 1.041392685 0.5 0 0 12 1 0 11 2R:16136217-16136254 7 spin FBtr0089589 16136204 16138238 CCACCGA 7mer-A1 dme-miR-278-3p 2R + 16136208 16136259 3'utr spin FlyBase G12364.1 CACCTGCACAAGAACCCCAGCGACTCTGGACTGACCACCGAGCTGCGAAGCA 13 16136234 0.874094546 4 13 33 1 1.204119983 0.625 0.230769231 0.375 13 0 0 16 2R:16136208-16136259 7 11.5 1247 FBgn0086676 4918.906667 189.3433333 292.6266667 0.002337918 0.060736229 0.039299221 8 8 8 0.1 dme-miR-277-3p 7mer-A1 GCATTTA 2R 16141707 16141713 + 2R_16141707_16141713_+ 0.823349262 0.823349471 0.823349367 1.41E-07 Got1 FBtr0087231|FBtr0087232 16141592|16141592 16141928|16141928 2R + 16141672 16141794 3'utr Got1 FlyBase G16301.2 ATCCCAAAGCTGGATCACAGATGTCTGCACCATTGGCATTTAAATCAAACCAACAACAATTGCAATTACTAAACGTTTATACGCGGCTTTTAGATGGATATACACATATTATACACCGGAAAC 69 16141705 0.980309831 15 66 466 0.975 1.892094603 0.0875 0.130434783 0.25 69 2 0 78 2R:16141672-16141794 7 Got1 FBtr0087231|FBtr0087232 16141592|16141592 16141928|16141928 GCATTTA 7mer-A1 dme-miR-277-3p 2R + 16141678 16141768 3'utr Got1 FlyBase G12377.1 AAGCTGGATCACAGATGTCTGCACCATTGGCATTTAAATCAAACCAACAACAATTGCAATTACTAAACGTTTATACGCGGCTTTTAGATGG 29 16141705 0.918595857 8 29 185 1 1.672097858 0.063829787 0.413793103 0.638297872 29 0 0 47 2R:16141678-16141768 7 27 1248 FBgn0001124 622.6666667 44.53666667 67.53 0.043361884 0.606242048 0.399822301 2 2 2 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT 2R 16145990 16145996 - 2R_16145990_16145996_- 0.658813373 0.658787836 0.658800604 1.81E-05 Ext2 FBtr0100513 16145902 16146381 2R - 16145970 16146010 3'utr Ext2 FlyBase G23963.1 TAGGTCGTAATATTGGCAGCTTTTATCTAGACTTTATTTTG 118 16145997 0.783795038 12 103 1142 0.892307692 1.023065304 0.192307692 0.093220339 0.176923077 118 4 10 116 2R:16145970-16146010 7 Ext2 FBtr0100513 16145902 16146381 GGCAGCT 7mer-m8 dme-miR-980-3p 2R - 16145911 16146010 3'utr Ext2 FlyBase G18137.1 TAGGTCGTAATATTGGCAGCTTTTATCTAGACTTTATTTTGATTTTAAATCAATAATTTAAAAAACTGAAACTGGCCTGTAAATAAGAATTAAAATAATC 112 16145998 0.989554471 18 99 985 0.883040936 1.224734438 0.105263158 0.375 0.590643275 112 12 8 151 2R:16145911-16146010 7 98.5 1249 FBgn0029175 123.3333333 5.64 8.726666667 0.798648649 17.46453901 11.28724217 1 2 1.5 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 2R 16146150 16146155 - 2R_16146150_16146155_- 0.992385552 0.987388092 0.989886822 0.003533766 Ext2 FBtr0100513 16145902 16146381 2R - 16146096 16146161 3'utr Ext2 FlyBase G23965.1 ATTCTTTTGACTTCTCATTGGTACTCAAAAATCCAATTATTCCGTTTGGATTCTCACGTATTTGTC 25 16146144 0.985861528 8 24 215 0.964285714 1.431363764 0.142857143 0.12 0.214285714 25 1 0 27 2R:16146096-16146161 6 Ext2 FBtr0100513 16145902 16146381 TTGACT 6mer3-8 dme-miR-1012-3p 2R - 16146128 16146177 3'utr Ext2 FlyBase G18138.1 AGGCAGGTCCGGTTGTATTCTTTTGACTTCTCATTGGTACTCAAAAATCC 15 16146143 0.746474612 7 14 134 0.896551724 1.414973348 0.379310345 0.4 0.689655172 15 3 0 26 2R:16146128-16146177 6 18 1250 FBgn0029175 123.3333333 5.64 8.726666667 0.145945946 3.191489362 2.062643239 -11 -12 -11.5 0.1 dme-bantam-3p 6mer2-7 GATCTC 2R 16146227 16146232 - 2R_16146227_16146232_- 1 1 1 0 Ext2 FBtr0100513 16145902 16146381 2R - 16146202 16146247 3'utr Ext2 FlyBase G23966.1 AGGCCAACTTATCTGGATCTCGCTTAGAAAATCAATTTCGTCATTG 22 16146235 0.631600099 8 20 139 0.925925926 0.920818754 0.111111111 0.227272727 0.37037037 22 0 2 25 2R:16146202-16146247 6 Ext2 FBtr0100513 16145902 16146381 GATCTC 6mer2-7 dme-bantam-3p 2R - 16146203 16146290 3'utr Ext2 FlyBase G18139.1 AATGTTCGTTTATATCATAGCAATACCTTCTTAACGGATAAAGAGGCCAACTTATCTGGATCTCGCTTAGAAAATCAATTTCGTCATT 11 16146224 0.987250248 6 10 82 0.95 1.278753601 0.05 0.636363636 0.8 11 1 0 19 2R:16146203-16146290 6 12 1251 FBgn0029175 123.3333333 5.64 8.726666667 0.097297297 2.127659574 1.375095493 3 -8 -2.5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 2R 16146326 16146333 - 2R_16146326_16146333_- 0.643552888 0.643549531 0.643551209 2.40E-06 Ext2 FBtr0100513 16145902 16146381 2R - 16146321 16146357 3'utr Ext2 FlyBase G23967.1 TTCCAGAGGAACCTATGCAGATATACCAAAGACTTCT 29 16146334 0.903560685 3 28 134 0.971428571 1.531478917 0.228571429 0.206896552 0.342857143 29 1 0 34 2R:16146321-16146357 8 Ext2 FBtr0100513 16145902 16146381 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 16146321 16146402 stop_codon Ext2 FlyBase G18140.1 AATGATATTGGTAGCTTATAAGGGTCCTTAGCTTTGAGGCCAACATTCCAGAGGAACCTATGCAGATATACCAAAGACTTCT 21 16146334 0.900705693 4 20 109 0.972222222 1.243038049 0.166666667 0.476190476 0.694444444 21 0 1 35 2R:16146321-16146402 8 21.5 1252 FBgn0029175 123.3333333 5.64 8.726666667 0.174324324 3.812056738 2.463712758 1 1 1 0.1 dme-miR-988-3p 6mer2-7 CAAGGG 2R 16183693 16183698 + 2R_16183693_16183698_+ 1 1 1 0 Lis-1 FBtr0087240|FBtr0087241|FBtr0304747|FBtr0087236 16183675|16183675|16183675|16183675 16185103|16185103|16183991|16185103 2R + 16183680 16183733 3'utr Lis-1 FlyBase G16359.1 AAGGAAGAATCGGCAAGGGTTCTGCTTACTTCTCAATTTAAACATAAATAAAGC 26 16183706 0.627784791 6 24 215 0.970588235 1.51851394 0.029411765 0.269230769 0.441176471 26 1 0 33 2R:16183680-16183733 6 Lis-1 FBtr0087236|FBtr0304747|FBtr0087241|FBtr0087240 16183675|16183675|16183675|16183675 16185103|16183991|16185103|16185103 CAAGGG 6mer2-7 dme-miR-988-3p 2R + 16183668 16183720 stop_codon Lis-1 FlyBase G12426.1 TGTCGTTAAATTAAGGAAGAATCGGCAAGGGTTCTGCTTACTTCTCAATTTAA 22 16183706 0.785535448 8 19 168 0.84 0.84509804 0.12 0.136363636 0.24 22 2 2 21 2R:16183668-16183720 6 20.5 1253 FBgn0015754 1628.096667 94.36 143.8866667 0.01259139 0.217253073 0.142473243 -13 -13 -13 0.1 dme-miR-190-5p 6mer3-8 ACATAT 2R 16183840 16183845 + 2R_16183840_16183845_+ 0.937557677 0.999999746 0.968778711 0.044153162 Lis-1 FBtr0087240|FBtr0087241|FBtr0304747|FBtr0087236 16183675|16183675|16183675|16183675 16185103|16185103|16183991|16185103 2R + 16183810 16183882 3'utr Lis-1 FlyBase G16360.1 CCAGACGCTTTCTGTGTCAGCGTAAAATGAACATATTGTATTTTAAAACTGAATGAAACTGGCGAAAACGAAT 21 16183862 0.966204157 10 20 101 0.961538462 1.397940009 0.307692308 0.19047619 0.346153846 21 1 0 25 2R:16183810-16183882 6 Lis-1 FBtr0087236|FBtr0304747|FBtr0087241|FBtr0087240 16183675|16183675|16183675|16183675 16185103|16183991|16185103|16185103 ACATAT 6mer3-8 dme-miR-190-5p 2R + 16183808 16183907 3'utr Lis-1 FlyBase G12427.1 TTCCAGACGCTTTCTGTGTCAGCGTAAAATGAACATATTGTATTTTAAAACTGAATGAAACTGGCGAAAACGAATTATTTATTTAATTGTACGACCTTCT 14 16183852 0.971962674 9 14 90 1 1.230448921 0.117647059 0.214285714 0.352941176 14 0 0 17 2R:16183808-16183907 6 6.5 1254 FBgn0015754 1628.096667 94.36 143.8866667 0.003992392 0.068885121 0.045174443 -22 -12 -17 0.1 dme-miR-999-3p 6mer3-8 AGTTAA 2R 16183988 16183993 + 2R_16183988_16183993_+ 1 1 1 0 Lis-1 FBtr0087240|FBtr0087241|FBtr0087236 16183675|16183675|16183675 16185103|16185103|16185103 2R + 16183975 16184012 3'utr Lis-1 FlyBase G16361.1 GATTATCGTTTAAAGTTAATGCCGCCCTCCTTTATAAA 5 16183993 0.717100882 3 5 43 1 0.903089987 0 0.4 0.625 5 0 0 8 2R:16183975-16184012 6 Lis-1 FBtr0087236|FBtr0087241|FBtr0087240 16183675|16183675|16183675 16185103|16185103|16185103 AGTTAA 6mer3-8 dme-miR-999-3p 2R + 16183975 16184008 3'utr Lis-1 FlyBase G12428.1 GATTATCGTTTAAAGTTAATGCCGCCCTCCTTTA 5 16183993 0.73429486 3 5 34 1 0.954242509 0 0.6 0.777777778 5 0 0 9 2R:16183975-16184008 6 5 1255 FBgn0015754 1628.096667 94.36 143.8866667 0.003071071 0.052988554 0.034749571 -5 -5 -5 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 16184444 16184450 + 2R_16184444_16184450_+ 0.661615632 0.661615643 0.661615637 0 Lis-1 FBtr0087240|FBtr0087241|FBtr0087236 16183675|16183675|16183675 16185103|16185103|16185103 2R + 16184394 16184476 3'utr Lis-1 FlyBase G16363.1 GATAACAGTTTGCTTCTTTTAACCATATTCACTTTACACAATTCCTGTTTTGTGTTCTTTTTCGCGAAAGGATCTTCAACAAA 47 16184443 0.994858123 9 45 627 0.981818182 1.73239376 0.036363636 0.170212766 0.290909091 47 1 0 54 2R:16184394-16184476 7 Lis-1 FBtr0087236|FBtr0087241|FBtr0087240 16183675|16183675|16183675 16185103|16185103|16185103 TGTGTTC 7mer-m8 dme-miR-317-3p 2R + 16184409 16184460 3'utr Lis-1 FlyBase G12430.1 CTTTTAACCATATTCACTTTACACAATTCCTGTTTTGTGTTCTTTTTCGCGA 27 16184443 0.99430167 6 27 354 1 1.531478917 0.029411765 0.222222222 0.382352941 27 0 0 34 2R:16184409-16184460 7 34.5 1256 FBgn0015754 1628.096667 94.36 143.8866667 0.021190388 0.365621026 0.239772043 1 1 1 0.1 dme-miR-33-5p 7mer-m8 CAATGCA 2R 16184972 16184978 + 2R_16184972_16184978_+ 0.674443391 0.622329368 0.648386379 0.036850163 Lis-1 FBtr0087240|FBtr0087241|FBtr0087236 16183675|16183675|16183675 16185103|16185103|16185103 2R + 16184938 16184991 3'utr Lis-1 FlyBase G16366.1 AAAAAACAAAATGCGCACTAAAGCCACGACAACTCAATGCATAATTCGCAAAAC 10 16184971 0.918386417 4 10 33 1 1.041392685 0.272727273 0.1 0.181818182 10 0 0 11 2R:16184938-16184991 7 Lis-1 FBtr0087236|FBtr0087241|FBtr0087240 16183675|16183675|16183675 16185103|16185103|16185103 CAATGCA 7mer-m8 dme-miR-33-5p 2R + 16184956 16184985 3'utr Lis-1 FlyBase G12433.1 TAAAGCCACGACAACTCAATGCATAATTCG 5 16184979 0.944892381 4 4 18 0.857142857 0.77815125 0.428571429 0.4 0.571428571 5 1 0 6 2R:16184956-16184985 7 7 1257 FBgn0015754 1628.096667 94.36 143.8866667 0.004299499 0.074183976 0.0486494 1 -7 -3 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT 2R 16194249 16194255 - 2R_16194249_16194255_- 0.658999361 0.658999311 0.658999336 7.07E-08 calypso FBtr0087245|FBtr0087246 16194060|16194060 16194434|16194434 2R - 16194231 16194291 3'utr calypso FlyBase G23979.1 ACTCAAATGCGGTTCTTTTAAATACGAAATCAACTTGGCAGCTTCATTTTTATTTGATCGC 175 16194257 0.832030415 6 172 1135 0.985148515 1.696793085 0.475247525 0.131428571 0.247524752 175 0 3 199 2R:16194231-16194291 7 calypso FBtr0087246|FBtr0087245 16194060|16194060 16194434|16194434 GGCAGCT 7mer-m8 dme-miR-980-3p 2R - 16194231 16194268 3'utr calypso FlyBase G18147.1 ACGAAATCAACTTGGCAGCTTCATTTTTATTTGATCGC 147 16194257 0.838331054 4 146 982 0.990990991 2.342422681 0.436936937 0.367346939 0.581081081 147 2 0 220 2R:16194231-16194268 7 159.5 1258 FBgn0262166 217.8466667 12.40333333 18.96 0.732166356 12.85944639 8.412447257 2 2 2 0.1 dme-miR-8-3p 7mer-m8 CAGTATT 2R 16194362 16194368 - 2R_16194362_16194368_- 0.66161502 0.661612098 0.661613559 2.05E-06 calypso FBtr0087245|FBtr0087246 16194060|16194060 16194434|16194434 2R - 16194315 16194391 3'utr calypso FlyBase G23980.1 TGCATTTTTAAGACCATTCATTCCAGTATTGTTTTTCTACAATTTCCCCACCAAGAAGCACCATTAACCCATAAGAT 28 16194371 0.989152823 6 28 266 1 1.477121255 0.1 0.071428571 0.133333333 28 0 0 30 2R:16194315-16194391 7 calypso FBtr0087246|FBtr0087245 16194060|16194060 16194434|16194434 CAGTATT 7mer-m8 dme-miR-8-3p 2R - 16194335 16194392 3'utr calypso FlyBase G18148.1 TTGCATTTTTAAGACCATTCATTCCAGTATTGTTTTTCTACAATTTCCCCACCAAGAA 8 16194371 0.991667507 3 8 87 1 1.146128036 0.142857143 0.375 0.642857143 8 0 0 14 2R:16194335-16194392 7 15 1259 FBgn0262166 217.8466667 12.40333333 18.96 0.06885577 1.209352325 0.791139241 3 3 3 0.1 dme-miR-980-5p 7mer-m1 AAAAACT 2R 16198018 16198024 + 2R_16198018_16198024_+ 0.463415411 0.673889796 0.568652603 0.148827876 CG42837 FBtr0303860 16197515 16199378 2R + 16197968 16198069 3'utr CG42837 FlyBase G16397.1 CGCAGTCCAGCGATGTGTTCACCAACCTCGCTCTAGAGGATTGGCTGTACAAAAACTTTGATTTCAGCCGCCACCATGTGCTGCTGCTGTGGGCCAACGACC 27 16198009 0.974301643 9 27 160 1 1.51851394 0.060606061 0.148148148 0.303030303 27 0 0 33 2R:16197968-16198069 7 CG42837 FBtr0303860 16197515 16199378 AAAAACT 7mer-m1 dme-miR-980-5p 2R + 16197939 16198052 3'utr CG42837 FlyBase G12451.1 TTCGGAGATCAAGAAGTCCGTGTTCATCTCGCAGTCCAGCGATGTGTTCACCAACCTCGCTCTAGAGGATTGGCTGTACAAAAACTTTGATTTCAGCCGCCACCATGTGCTGCT 14 16198025 0.980568834 7 13 90 0.888888889 0.77815125 0.222222222 0.571428571 0.777777778 14 0 3 24 2R:16197939-16198052 7 16 1260 FBgn0262026 104.31 5.966666667 9.106666667 0.153388937 2.681564246 1.756954612 9 -7 1 0.1 dme-bantam-3p 6mer3-8 TGATCT 2R 16198185 16198190 + 2R_16198185_16198190_+ 0.999971956 0.999999564 0.99998576 1.95E-05 CG42837 FBtr0303860 16197515 16199378 2R + 16198164 16198208 3'utr CG42837 FlyBase G16398.1 TGGCGGTGGAGCGGTGTACCATGATCTTGGGAACCTCAACTGCAC 12 16198185 0.840591683 3 11 65 0.857142857 1.079181246 0.214285714 0.166666667 0.285714286 12 2 0 12 2R:16198164-16198208 6 CG42837 FBtr0303860 16197515 16199378 TGATCT 6mer3-8 dme-bantam-3p 2R + 16198161 16198195 3'utr CG42837 FlyBase G12452.1 TAGTGGCGGTGGAGCGGTGTACCATGATCTTGGGA 8 16198185 0.742623543 4 8 49 1 1.204119983 0.3125 0.5 0.75 8 0 0 16 2R:16198161-16198195 6 8.5 1261 FBgn0262026 104.31 5.966666667 9.106666667 0.081487873 1.424581006 0.933382138 0 0 0 0.1 dme-miR-965-3p 7mer-m8 TACGCTT 2R 16198724 16198730 + 2R_16198724_16198730_+ 0.620090427 0.620142615 0.620116521 3.69E-05 CG42837 FBtr0303860 16197515 16199378 2R + 16198698 16198742 3'utr CG42837 FlyBase G16399.1 TACGAGTATTTGAGAACGGCTGCAACTACGCTTGAAGACGGCGGC 6 16198724 0.902221087 2 6 19 1 0.954242509 0.222222222 0.5 0.666666667 6 0 0 9 2R:16198698-16198742 7 CG42837 FBtr0303860 16197515 16199378 TACGCTT 7mer-m8 dme-miR-965-3p 2R + 16198709 16198746 3'utr CG42837 FlyBase G12454.1 GAGAACGGCTGCAACTACGCTTGAAGACGGCGGCAGCA 5 16198724 0.89781642 2 5 15 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 2R:16198709-16198746 7 4.5 1262 FBgn0262026 104.31 5.966666667 9.106666667 0.043140638 0.754189944 0.494143485 0 0 0 0.1 dme-miR-277-3p 6mer3-8 TGCATT 2R 16199351 16199356 + 2R_16199351_16199356_+ 1 1 1 0 CG42837 FBtr0303860 16197515 16199378 2R + 16199318 16199372 3'utr CG42837 FlyBase G16402.1 TTACTTTTGTTACCACGTTTTATATAAAAGAACTGCATTAAATGTTTAAACATTG 22 16199341 0.983602483 6 21 168 0.956521739 1.342422681 0.086956522 0.045454545 0.086956522 22 1 0 22 2R:16199318-16199372 6 CG42837 FBtr0303860 16197515 16199378 TGCATT 6mer3-8 dme-miR-277-3p 2R + 16199333 16199370 3'utr CG42837 FlyBase G12456.1 CGTTTTATATAAAAGAACTGCATTAAATGTTTAAACAT 19 16199341 0.673189151 8 18 137 0.962962963 1.113943352 0 0.315789474 0.518518519 19 0 1 26 2R:16199333-16199370 6 20.5 1263 FBgn0262026 104.31 5.966666667 9.106666667 0.196529575 3.43575419 2.251098097 10 10 10 0.1 dme-miR-184-5p 6mer2-7 GATAAG 2R 16321091 16321096 - 2R_16321091_16321096_- 0.988715188 0.987734391 0.988224789 0.00069353 CG30096 FBtr0289994 16320813 16321126 2R - 16321043 16321120 3'utr CG30096 FlyBase G24055.1 TATGTATAAGTAAACTAAGCTGTAGATAAGTCTGAATATTATGAAAGTAAATGTTGTCTCTTGTATTTATTAAGTTAC 27 16321094 0.9867156 4 24 214 0.9 1.431363764 0.033333333 0.111111111 0.2 27 3 0 27 2R:16321043-16321120 6 CG30096 FBtr0289994 16320813 16321126 GATAAG 6mer2-7 dme-miR-184-5p 2R - 16321039 16321109 3'utr CG30096 FlyBase G18206.1 AAACTAAGCTGTAGATAAGTCTGAATATTATGAAAGTAAATGTTGTCTCTTGTATTTATTAAGTTACATTT 24 16321094 0.985629013 2 21 187 0.875 1.447158031 0.0625 0.333333333 0.5 24 4 0 28 2R:16321039-16321109 6 21.5 1264 FBgn0050096 38.66666667 4.263333333 6.543333333 0.556034483 5.043002346 3.285787061 -2 -2 -2 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 16532600 16532607 + 2R_16532600_16532607_+ 0.562828299 0.507660393 0.535244346 0.039009596 Sema-2a FBtr0087089|FBtr0345339|FBtr0087090|FBtr0087088 16532399|16532399|16532399|16532399 16533428|16533428|16533428|16533459 2R + 16532523 16532698 5'utr Sema-2a FlyBase G16473.1 ATAATCATTATTATCAGCGACATCATCATAGACATACTTTCTTCAGCAATGAACAGAAAACTCTTCCTAAAGGATTATGCATTTACCGAAGCATTTACAATGCATCCATTGACTTAGACTTAGACATTAGGGTATTATCGCATGACACAGCTCCTCCCATACGGTGCAATTCACCC 30 16532600 0.979991457 14 29 205 0.974358974 1.579783597 0.102564103 0.266666667 0.435897436 30 1 0 38 2R:16532523-16532698 8 Sema-2a FBtr0087088|FBtr0087090|FBtr0345339|FBtr0087089 16532399|16532399|16532399|16532399 16533459|16533428|16533428|16533428 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 16532571 16532605 5'utr Sema-2a FlyBase G12514.1 ATGAACAGAAAACTCTTCCTAAAGGATTATGCATT 6 16532587 0.967523832 5 5 28 0.9 0.653212514 0.5 0.5 0.7 6 0 1 9 2R:16532571-16532605 6 5.5 1265 FBgn0011260 1008.703333 35.04333333 54.17 0.005452545 0.15694854 0.101532213 0 13 6.5 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 2R 16532631 16532636 + 2R_16532631_16532636_+ 0.999927835 0.999978262 0.999953049 3.57E-05 Sema-2a FBtr0087089|FBtr0345339|FBtr0087090|FBtr0087088 16532399|16532399|16532399|16532399 16533428|16533428|16533428|16533459 2R + 16532523 16532698 5'utr Sema-2a FlyBase G16473.1 ATAATCATTATTATCAGCGACATCATCATAGACATACTTTCTTCAGCAATGAACAGAAAACTCTTCCTAAAGGATTATGCATTTACCGAAGCATTTACAATGCATCCATTGACTTAGACTTAGACATTAGGGTATTATCGCATGACACAGCTCCTCCCATACGGTGCAATTCACCC 30 16532632 0.979991457 14 29 205 0.974358974 1.579783597 0.102564103 0.266666667 0.435897436 30 1 0 38 2R:16532523-16532698 6 Sema-2a FBtr0087088|FBtr0087090|FBtr0345339|FBtr0087089 16532399|16532399|16532399|16532399 16533459|16533428|16533428|16533428 TTGACT 6mer3-8 dme-miR-1012-3p 2R + 16532621 16532679 5'utr Sema-2a FlyBase G12515.1 AATGCATCCATTGACTTAGACTTAGACATTAGGGTATTATCGCATGACACAGCTCCTCC 10 16532635 0.975327284 5 9 67 1 1.278753601 0.157894737 0.6 0.789473684 10 0 0 19 2R:16532621-16532679 6 9.5 1266 FBgn0011260 1008.703333 35.04333333 54.17 0.009418032 0.271092933 0.175373823 -1 -4 -2.5 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 16533360 16533367 + 2R_16533360_16533367_+ 0.500109834 0.500111819 0.500110827 1.41E-06 Sema-2a FBtr0087089|FBtr0345339|FBtr0087090|FBtr0087088 16532399|16532399|16532399|16532399 16533428|16533428|16533428|16533459 2R + 16533334 16533379 5'utr Sema-2a FlyBase G16474.1 TGACTTGCACTCTCTTCACACTAAATGTACTTAAGGTAATTTGCAA 44 16533359 0.830129931 3 43 337 0.980392157 1.698970004 0.019607843 0.136363636 0.254901961 44 1 0 50 2R:16533334-16533379 8 Sema-2a FBtr0087088|FBtr0087090|FBtr0345339|FBtr0087089 16532399|16532399|16532399|16532399 16533459|16533428|16533428|16533428 GTACTTAA 8mer-A1 dme-miR-252-5p 2R + 16533329 16533428 5'utr Sema-2a FlyBase G12516.1 TTTAGTGACTTGCACTCTCTTCACACTAAATGTACTTAAGGTAATTTGCAAAAATCTTTAGTTCTTAAGCGTTTAGTTATAATAAAATGAGACAAAAACC 34 16533359 0.99907015 6 33 241 0.978723404 1.662757832 0 0.294117647 0.489361702 34 1 0 46 2R:16533329-16533428 8 34 1267 FBgn0011260 1008.703333 35.04333333 54.17 0.03370664 0.970227338 0.627653683 1 1 1 0.1 dme-miR-276a-3p 6mer2-7 GTTCCT 2R 16585157 16585162 + 2R_16585157_16585162_+ 1 1 1 0 Cdk4 FBtr0340063|FBtr0345340|FBtr0087103|FBtr0087104|FBtr0087102 16585034|16585034|16585034|16585034|16585034 16585448|16585448|16585448|16585448|16585448 2R + 16584952 16585184 stop_codon Cdk4 FlyBase G16478.1 AAAATGCTTTCCTACGACCTCCACCTGCGACCATCCGCCTTGGCCTGTTTGGAGCACGATTACTTTCAGCAGGAACCCCTATAGTCTCGATGCCCAGAAGGATAATGGATAATGGATTATGGATTATGGATTATGGATTATGGATGTGGAAGTGAAAGTGGCAGTGGACTGATCATTGCGGCCGCGCTTCGTTCTTGTTACCAATGTTCCTTTAAGTGTAGTGAAGCATTTTG 172 16585156 0.870702173 30 169 1631 0.984615385 1.806179974 0.517948718 0.11627907 0.220512821 172 1 2 192 2R:16584952-16585184 6 Cdk4 FBtr0087102|FBtr0340063|FBtr0345340|FBtr0087103|FBtr0087104 16585034|16585034|16585034|16585034|16585034 16585448|16585448|16585448|16585448|16585448 GTTCCT 6mer2-7 dme-miR-276a-3p 2R + 16585129 16585180 3'utr Cdk4 FlyBase G12519.2 GCGGCCGCGCTTCGTTCTTGTTACCAATGTTCCTTTAAGTGTAGTGAAGCAT 81 16585157 0.709733468 7 79 839 0.992 1.792391689 0.368 0.382716049 0.6 81 0 1 124 2R:16585129-16585180 6 107 1268 FBgn0016131 414.8133333 26.95666667 40.80666667 0.25794735 3.969333498 2.622120569 1 0 0.5 0.1 dme-miR-34-5p 6mer2-7 ACTGCC 2R 16585285 16585290 + 2R_16585285_16585290_+ 0.97183643 0.651068189 0.811452309 0.226817369 Cdk4 FBtr0340063|FBtr0345340|FBtr0087103|FBtr0087104|FBtr0087102 16585034|16585034|16585034|16585034|16585034 16585448|16585448|16585448|16585448|16585448 2R + 16585257 16585337 3'utr Cdk4 FlyBase G16479.1 TTGTAGTCGTAAGTTAAGTGTGAATACTACTGCCGATCAACTATCTGATGACCATTACATGTGAAACGATTCTCGAGGGCG 26 16585284 0.719682314 10 24 139 0.966666667 1.462397998 0.233333333 0.153846154 0.266666667 26 1 0 29 2R:16585257-16585337 6 Cdk4 FBtr0087102|FBtr0340063|FBtr0345340|FBtr0087103|FBtr0087104 16585034|16585034|16585034|16585034|16585034 16585448|16585448|16585448|16585448|16585448 ACTGCC 6mer2-7 dme-miR-34-5p 2R + 16585254 16585325 3'utr Cdk4 FlyBase G12520.1 TGTTTGTAGTCGTAAGTTAAGTGTGAATACTACTGCCGATCAACTATCTGATGACCATTACATGTGAAACGA 16 16585284 0.79437325 6 14 88 0.941176471 1.204119983 0.058823529 0.0625 0.117647059 16 1 0 16 2R:16585254-16585325 6 15 1269 FBgn0016131 414.8133333 26.95666667 40.80666667 0.036160843 0.556448621 0.367586996 1 1 1 0.1 dme-miR-14-3p 8mer-A1 AAGACTGA 2R 16791590 16791597 + 2R_16791590_16791597_+ 0.643489151 0.643531427 0.643510289 2.98E-05 CG5522 FBtr0087030|FBtr0087029|FBtr0087031|FBtr0087028|FBtr0087026 16791350|16791350|16791350|16791350|16791350 16792472|16792472|16792472|16792472|16792472 2R + 16791477 16791638 3'utr CG5522 FlyBase G16511.1 ACATCGCTCACTCACTCCCTGAAACGAGGCAACCACAGAACATTCCCGCAACCACAACGAACGAACAAATTGCAGCTTGCATCAGATGAATCGATTTCAAAATGGTATTTCAAAAGACTGACACCGAATGAGAACACGAAGATATAGTAAAGGAGGAGCAGT 357 16791584 0.935187844 20 326 1563 0.920187793 1.639043558 0.241784038 0.145658263 0.284037559 357 26 8 392 2R:16791477-16791638 8 CG5522 FBtr0087026|FBtr0087031|FBtr0087028|FBtr0087030|FBtr0087029 16791350|16791350|16791350|16791350|16791350 16792472|16792472|16792472|16792472|16792472 AAGACTGA 8mer-A1 dme-miR-14-3p 2R + 16791435 16791628 3'utr CG5522 FlyBase G12555.2 CCTTGAAACGTGCACAGCCAAAAAAAAAAACACCCACCCACCACATCGCTCACTCACTCCCTGAAACGAGGCAACCACAGAACATTCCCGCAACCACAACGAACGAACAAATTGCAGCTTGCATCAGATGAATCGATTTCAAAATGGTATTTCAAAAGACTGACACCGAATGAGAACACGAAGATATAGTAAAG 275 16791584 0.964070358 18 243 1174 0.886419753 1.709996409 0.212345679 0.345454545 0.555555556 275 40 6 359 2R:16791435-16791628 8 184.5 1270 FBgn0034158 1968.163333 68.45666667 105.0966667 0.09374222 2.695135609 1.755526658 6 6 6 0.1 dme-miR-263a-5p 8mer-A1 GTGCCATA 2R 16792035 16792042 + 2R_16792035_16792042_+ 0.581135242 0.581858979 0.58149711 0.000511804 CG5522 FBtr0087030|FBtr0087029|FBtr0087031|FBtr0087028|FBtr0087026 16791350|16791350|16791350|16791350|16791350 16792472|16792472|16792472|16792472|16792472 2R + 16792015 16792057 3'utr CG5522 FlyBase G16513.1 AACTTAATTTTGCGCAGACTGTGCCATATTAGTTTATAAATTT 37 16792050 0.710439854 10 17 398 0.454545455 0.823908741 0 0.189189189 0.318181818 37 22 2 20 2R:16792015-16792057 8 CG5522 FBtr0087026|FBtr0087031|FBtr0087028|FBtr0087030|FBtr0087029 16791350|16791350|16791350|16791350|16791350 16792472|16792472|16792472|16792472|16792472 GTGCCATA 8mer-A1 dme-miR-263a-5p 2R + 16792020 16792092 3'utr CG5522 FlyBase G12557.1 AATTTTGCGCAGACTGTGCCATATTAGTTTATAAATTTATGTGTCTACACAAACACTGTTGGCCAGCAAACGA 22 16792047 0.992254127 11 14 194 0.653846154 0.753327667 0.038461538 0.136363636 0.269230769 22 7 2 17 2R:16792020-16792092 8 26.5 1271 FBgn0034158 1968.163333 68.45666667 105.0966667 0.01346433 0.387106199 0.252148815 -15 -12 -13.5 0.1 dme-miR-79-3p 6mer2-7 AGCTTT 2R 16792374 16792379 + 2R_16792374_16792379_+ 0.958269658 0.999982756 0.979126207 0.029495616 CG5522 FBtr0087030|FBtr0087029|FBtr0087031|FBtr0087028|FBtr0087026 16791350|16791350|16791350|16791350|16791350 16792472|16792472|16792472|16792472|16792472 2R + 16792328 16792450 3'utr CG5522 FlyBase G16516.1 GTTAGTGTTTCTTTTTTTCGGTTGAGAAATTGAATTGTAACACCTAAGCTTTGTCACACATACAGATTATCATTTGCAGTGTTTTACATTACATTTAAGAAAGAAATGCAACAAAAACAAAAT 42 16792372 0.985597933 17 42 346 1 1.72427587 0.20754717 0.19047619 0.358490566 42 0 0 53 2R:16792328-16792450 6 CG5522 FBtr0087026|FBtr0087031|FBtr0087028|FBtr0087030|FBtr0087029 16791350|16791350|16791350|16791350|16791350 16792472|16792472|16792472|16792472|16792472 AGCTTT 6mer2-7 dme-miR-79-3p 2R + 16792295 16792445 3'utr CG5522 FlyBase G12559.1 ATGCATGCGTAAATTATAGGAAACGAAAGTAATGTTAGTGTTTCTTTTTTTCGGTTGAGAAATTGAATTGTAACACCTAAGCTTTGTCACACATACAGATTATCATTTGCAGTGTTTTACATTACATTTAAGAAAGAAATGCAACAAAAAC 37 16792372 0.985890371 17 35 292 0.942307692 1.69019608 0.096153846 0.324324324 0.519230769 37 3 0 49 2R:16792295-16792445 6 19.5 1272 FBgn0034158 1968.163333 68.45666667 105.0966667 0.009907714 0.284851731 0.185543468 2 2 2 0.1 dme-miR-970-3p 6mer3-8 TCTTAT 2R 16860106 16860111 + 2R_16860106_16860111_+ 1 1 1 0 Dek FBtr0100438|FBtr0100436|FBtr0100437|FBtr0332946 16859863|16859863|16859863|16859863 16860358|16860358|16860270|16861738 2R + 16860006 16860108 3'utr Dek FlyBase G16546.1 CCAAGTAGTTGTCTCCTATAAGTATATGATTTGTACTCCTATCCTAAAAGCTATCTGCAGTTCACCTTAATCCTAACGTCAGCGGCAGTCGACTATCCATTCT 26 16860084 0.789470712 15 24 173 0.945945946 1.243038049 0.189189189 0.230769231 0.459459459 26 1 1 35 2R:16860006-16860108 3 Dek FBtr0100437|FBtr0332946|FBtr0100438|FBtr0100436 16859863|16859863|16859863|16859863 16860270|16861738|16860358|16860358 TCTTAT 6mer3-8 dme-miR-970-3p 2R + 16859978 16860175 3'utr Dek FlyBase G12583.1 AGTTGGGCATGGTTCGCGAAATGTAACTCCAAGTAGTTGTCTCCTATAAGTATATGATTTGTACTCCTATCCTAAAAGCTATCTGCAGTTCACCTTAATCCTAACGTCAGCGGCAGTCGACTATCCATTCTTATATATATTCATCTGTATATATAACTTTTTATTTGTCCAACCGTGCGCACGCATGCACATCATTTT 31 16860103 0.978654424 22 29 243 0.9375 1.352182518 0.145833333 0.483870968 0.666666667 31 2 1 45 2R:16859978-16860175 6 3.5 1273 FBgn0026533 3518.623333 168.86 259.8033333 0.000994707 0.02072723 0.013471729 22 3 12.5 0.1 dme-miR-184-3p 7mer-m8 TCCGTCC 2R 16862678 16862684 - 2R_16862678_16862684_- 0.595864194 0.66155229 0.628708242 0.046448501 Psi FBtr0087073 16861319 16864685 2R - 16862662 16862711 3'utr Psi FlyBase G24125.1 TTCGGGACTACCATCCAAATCCTGAACTCCGTCCTGCGGCCGGCCGGCAA 7 16862677 0.98113638 2 5 21 0.857142857 0.77815125 0.142857143 0 0 7 1 0 6 2R:16862662-16862711 7 Psi FBtr0087073 16861319 16864685 TCCGTCC 7mer-m8 dme-miR-184-3p 2R - 16862663 16862704 3'utr Psi FlyBase G18259.1 CTACCATCCAAATCCTGAACTCCGTCCTGCGGCCGGCCGGCA 5 16862677 0.971257413 3 5 15 1 0.903089987 0 0.2 0.5 5 0 0 8 2R:16862663-16862704 7 4 1274 FBgn0014870 726.0433333 22.66333333 34.83333333 0.005509313 0.176496544 0.114832536 -7 -7 -7 0.1 dme-miR-932-5p 6mer3-8 GGAATT 2R 16948595 16948600 - 2R_16948595_16948600_- 0.579820776 0.925913296 0.752867036 0.244724354 mute FBtr0112692|FBtr0112691 16948294|16948294 16948715|16948715 2R - 16948566 16948624 3'utr mute FlyBase G24137.1 ACCTACAAACCAAACTTTTTGAAGGGAATTCTTTGTTGTACTGATTACCTATTTAAGCA 43 16948586 0.995458461 8 34 528 0.755102041 1.267171728 0 0.139534884 0.244897959 43 11 1 37 2R:16948566-16948624 6 mute FBtr0112692|FBtr0112691 16948294|16948294 16948715|16948715 GGAATT 6mer3-8 dme-miR-932-5p 2R - 16948547 16948613 3'utr mute FlyBase G18268.1 AAACTTTTTGAAGGGAATTCTTTGTTGTACTGATTACCTATTTAAGCATACAAAAATTCCCTTCAGA 34 16948586 0.994788662 9 29 397 0.903225806 1.748188027 0.177419355 0.529411765 0.741935484 34 6 0 56 2R:16948547-16948613 6 34.5 1275 FBgn0085444 1225.333333 34.26666667 52.61333333 0.028155604 1.006809339 0.655727319 -14 -14 -14 0.1 dme-miR-304-5p 7mer-m8 TGAGATT 2R 16952530 16952536 + 2R_16952530_16952536_+ 0.620203442 0.620203442 0.620203442 0 CG34191 FBtr0112384|FBtr0340071 16952500|16952500 16952581|16952581 2R + 16952513 16952570 3'utr CG34191 FlyBase G16563.1 CCATCTTATTTACCCTTTGAGATTTTCCCCCTTTTTGATGCTTATTAAATGTTAAACA 56 16952529 0.805840238 10 54 619 0.971830986 1.838849091 0 0.232142857 0.394366197 56 2 0 69 2R:16952513-16952570 7 CG34191 FBtr0340071|FBtr0112384 16952500|16952500 16952581|16952581 TGAGATT 7mer-m8 dme-miR-304-5p 2R + 16952511 16952567 3'utr CG34191 FlyBase G12597.1 TCCCATCTTATTTACCCTTTGAGATTTTCCCCCTTTTTGATGCTTATTAAATGTTAA 24 16952529 0.765002373 7 24 248 1 1.544068044 0.085714286 0.291666667 0.514285714 24 0 0 35 2R:16952511-16952567 7 28.5 1276 FBgn0085220 88.66666667 25.16333333 38.02 0.321428571 1.132600344 0.749605471 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 17008240 17008245 - 2R_17008240_17008245_- 0.999993083 0.999992149 0.999992616 7.07E-07 Ehbp1 FBtr0114628|FBtr0114628|FBtr0114628|FBtr0340073|FBtr0340073|FBtr0340073|FBtr0114627|FBtr0114627|FBtr0114627|FBtr0087019|FBtr0087019|FBtr0087019 17007904|17007904|17007904|17007672|17007672|17007672|17007904|17007904|17007904|17007904|17007904|17007904 17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454 2R - 17008151 17008270 3'utr Ehbp1 FlyBase G24181.1 TGGTTATTAAAAAAAAAAAGGTATACTGTGAAACAAAACAAATTGCTTTTGTATTTAAGCAAAACAATTCAAGAAATAAGAACAAAACGTCCGTTAGTGAACTAAGTAAAAAGACAGGCA 413 17008247 0.787176222 15 393 1581 0.958515284 2.040404529 0.034934498 0.099273608 0.187772926 413 16 3 439 2R:17008151-17008270 6 Ehbp1 FBtr0087019|FBtr0087019|FBtr0087019|FBtr0114627|FBtr0114627|FBtr0114627|FBtr0340073|FBtr0340073|FBtr0340073|FBtr0114628|FBtr0114628|FBtr0114628 17007904|17007904|17007904|17007904|17007904|17007904|17007672|17007672|17007672|17007904|17007904|17007904 17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 17008207 17008284 3'utr Ehbp1 FlyBase G18305.1 TGGACCACTTGGTATGGTTATTAAAAAAAAAAAGGTATACTGTGAAACAAAACAAATTGCTTTTGTATTTAAGCAAAA 160 17008247 0.922222315 5 156 541 0.973568282 1.645422269 0 0.3125 0.515418502 160 2 4 221 2R:17008207-17008284 6 199 1277 FBgn0034180 1913.18 55.65333333 85.13666667 0.104015304 3.575706756 2.337418269 2 2 2 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2R 17016467 17016472 - 2R_17016467_17016472_- 0.999744611 0.994245382 0.996994996 0.003888522 CG8963 FBtr0087017|FBtr0300573|FBtr0340126|FBtr0087016 17016224|17016344|17016344|17016344 17016965|17016965|17016965|17016965 2R - 17016436 17016487 3'utr CG8963 FlyBase G24204.1 ACGCAGCTGCACTCAAAGACTCGTACTCATATGCGCACCCACACACTTGCAT 24 17016464 0.958040527 5 21 103 0.892857143 1.096910013 0.214285714 0.125 0.25 24 2 1 25 2R:17016436-17016487 6 CG8963 FBtr0340126|FBtr0087016|FBtr0087017|FBtr0300573 17016344|17016344|17016224|17016344 17016965|17016965|17016965|17016965 AAGACT 6mer3-8 dme-miR-14-3p 2R - 17016430 17016488 3'utr CG8963 FlyBase G18325.1 CACGCAGCTGCACTCAAAGACTCGTACTCATATGCGCACCCACACACTTGCATGGCACA 25 17016464 0.931795035 4 25 94 1 1.612783857 0.146341463 0.44 0.658536585 25 0 0 41 2R:17016430-17016488 6 22.5 1278 FBgn0034181 880.38 38.95666667 59.94333333 0.025557146 0.577564816 0.375354501 -8 -8 -8 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 17016685 17016691 - 2R_17016685_17016691_- 0.80196955 0.80193877 0.80195416 2.17E-05 CG8963 FBtr0087017|FBtr0087017|FBtr0087017|FBtr0300573|FBtr0300573|FBtr0300573|FBtr0340126|FBtr0340126|FBtr0340126|FBtr0087016|FBtr0087016|FBtr0087016 17016224|17016224|17016224|17016344|17016344|17016344|17016344|17016344|17016344|17016344|17016344|17016344 17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965 2R - 17016641 17016731 3'utr CG8963 FlyBase G24205.1 AATATGACATGTGTTAATGACTTTGTTCGAACGCTTTTTGTGTGATACGCCCGTTTTGTATCTCTGATAACTAACTCTCTGCCATGATAGC 29 17016693 0.987794464 14 29 257 1 1.602059991 0.3 0.24137931 0.45 29 0 0 40 2R:17016641-17016731 7 CG8963 FBtr0340126|FBtr0340126|FBtr0340126|FBtr0087016|FBtr0087016|FBtr0087016|FBtr0087017|FBtr0087017|FBtr0087017|FBtr0300573|FBtr0300573|FBtr0300573 17016344|17016344|17016344|17016344|17016344|17016344|17016224|17016224|17016224|17016344|17016344|17016344 17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 17016663 17016715 3'utr CG8963 FlyBase G18326.1 ATGACTTTGTTCGAACGCTTTTTGTGTGATACGCCCGTTTTGTATCTCTGATA 14 17016695 0.751333013 7 13 136 0.863636364 1.278753601 0.181818182 0.428571429 0.636363636 14 3 0 19 2R:17016663-17016715 7 15.5 1279 FBgn0034181 880.38 38.95666667 59.94333333 0.017606034 0.397877984 0.258577545 2 4 3 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 17016757 17016763 - 2R_17016757_17016763_- 0.789459359 0.721867526 0.755663442 0.047794691 CG8963 FBtr0087017|FBtr0087017|FBtr0087017|FBtr0300573|FBtr0300573|FBtr0300573|FBtr0340126|FBtr0340126|FBtr0340126|FBtr0087016|FBtr0087016|FBtr0087016 17016224|17016224|17016224|17016344|17016344|17016344|17016344|17016344|17016344|17016344|17016344|17016344 17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965 2R - 17016738 17016896 3'utr CG8963 FlyBase G24206.1 GGTATAGGAGGGATGGTGGAGAGCGTAGGAGTGGAGCATTTCCAACAAATTCTCGGTTGTAGGATCGATGATTGCAGTTGCTTGGTTCAGAACCAATTGTGATTATCTTTTAAATTATTGATAGCAAATTGTTTGTGATATCTTCGTGTTTCATGCACC 49 17016765 0.988369235 18 46 421 0.949152542 1.748188027 0.288135593 0.183673469 0.322033898 49 3 0 56 2R:17016738-17016896 7 CG8963 FBtr0340126|FBtr0340126|FBtr0340126|FBtr0087016|FBtr0087016|FBtr0087016|FBtr0087017|FBtr0087017|FBtr0087017|FBtr0300573|FBtr0300573|FBtr0300573 17016344|17016344|17016344|17016344|17016344|17016344|17016224|17016224|17016224|17016344|17016344|17016344 17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 17016736 17016780 3'utr CG8963 FlyBase G18327.1 ATTGATAGCAAATTGTTTGTGATATCTTCGTGTTTCATGCACCTA 21 17016765 0.989504091 7 21 207 1 1.531478917 0.264705882 0.476190476 0.676470588 21 0 0 34 2R:17016736-17016780 7 24 1280 FBgn0034181 880.38 38.95666667 59.94333333 0.027260955 0.616069137 0.400378135 2 2 2 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 2R 17016945 17016950 - 2R_17016945_17016950_- 0.992476543 0.985633646 0.989055094 0.004838661 CG8963 FBtr0087017|FBtr0300573|FBtr0340126|FBtr0087016 17016224|17016344|17016344|17016344 17016965|17016965|17016965|17016965 2R - 17016906 17017155 stop_codon CG8963 FlyBase G24207.1 GCCCGTCTTCTACGGACCTGATGGCCGCGAATTGACTGCCGAGGAGACCGATTTTCTGGCCGGCGGGGATAATGATGGTGATGATGACTTTGATGGGGATGGTGCCGACCTAGAAATCGACGCGGAAATGGACGAGGAAACCGAGCGGGCATACAAGGAGTTCTGTAAGCAGGGCAAACAGAAGACCTAGACGACTGTGGAGAACTGTGTTGCATTGGACGGATTCATGAGGGCGTGGTCGTTGGCAGGA 40 17016958 0.999958388 22 38 177 0.959183673 1.672097858 0.265306122 0.175 0.326530612 40 2 0 47 2R:17016906-17017155 6 CG8963 FBtr0340126|FBtr0087016|FBtr0087017|FBtr0300573 17016344|17016344|17016224|17016344 17016965|17016965|17016965|17016965 TGTGTT 6mer3-8 dme-miR-317-3p 2R - 17016931 17016986 stop_codon CG8963 FlyBase G18329.1 CAGGGCAAACAGAAGACCTAGACGACTGTGGAGAACTGTGTTGCATTGGACGGATT 13 17016958 0.863348425 3 13 37 1 1.278753601 0.210526316 0.461538462 0.631578947 13 0 0 19 2R:17016931-17016986 6 5.5 1281 FBgn0034181 880.38 38.95666667 59.94333333 0.006247302 0.14118251 0.091753323 8 8 8 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 17024875 17024880 + 2R_17024875_17024880_+ 0.999965093 0.999999926 0.99998251 2.46E-05 Dark FBtr0086967 17023336 17026703 2R + 17024852 17024895 3'utr Dark FlyBase G16606.1 CCAGAGAGCGGACGCAACTTCTGGCTGTGGACTCCAAGGAGCGC 10 17024873 0.959727336 2 10 49 1 1 0.2 0 0 10 0 0 10 2R:17024852-17024895 6 Dark FBtr0086967 17023336 17026703 GCTGTG 6mer2-7 dme-miR-1008-3p 2R + 17024851 17024895 3'utr Dark FlyBase G12629.1 ACCAGAGAGCGGACGCAACTTCTGGCTGTGGACTCCAAGGAGCGC 5 17024873 0.94947794 2 5 22 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 2R:17024851-17024895 6 7.5 1282 FBgn0263864 792.71 19.97666667 30.85666667 0.009461215 0.375438011 0.243059306 2 2 2 0.1 dme-miR-263a-5p 7mer-A1 TGCCATA 2R 17024982 17024988 + 2R_17024982_17024988_+ 0.752567183 0.765975688 0.759271435 0.009481241 Dark FBtr0086967 17023336 17026703 2R + 17024941 17024984 3'utr Dark FlyBase G16607.1 ACAATCACACCCACTCATGCTGCCAGTAACTGTAAGATAAATGC 9 17024958 0.669086179 3 7 56 0.8 0.903089987 0.3 0.111111111 0.2 9 2 0 8 2R:17024941-17024984 3 Dark FBtr0086967 17023336 17026703 TGCCATA 7mer-A1 dme-miR-263a-5p 2R + 17024922 17024984 3'utr Dark FlyBase G12630.1 TAGAATTTCCGAATGGTCCACAATCACACCCACTCATGCTGCCAGTAACTGTAAGATAAATGC 11 17024957 0.966768065 5 10 54 0.764705882 1.113943352 0.235294118 0.272727273 0.529411765 11 4 0 13 2R:17024922-17024984 3 4.5 1283 FBgn0263864 792.71 19.97666667 30.85666667 0.005676729 0.225262807 0.145835584 24 25 24.5 0.1 dme-miR-283-5p 7mer-m8 TGATATT 2R 17025158 17025164 + 2R_17025158_17025164_+ 0.606319736 0.613876493 0.610098115 0.005343465 Dark FBtr0086967 17023336 17026703 2R + 17025100 17025178 3'utr Dark FlyBase G16608.1 CTCAAACAGGTCAGTCCCAACATTCTGGTGGCGTCGGCACACAGTGCCCAGAAGACTGTGATATTCCAGCTGGAAAAGA 23 17025162 0.96525622 7 22 117 0.964285714 1.130333768 0.142857143 0.173913043 0.321428571 23 0 1 27 2R:17025100-17025178 7 Dark FBtr0086967 17023336 17026703 TGATATT 7mer-m8 dme-miR-283-5p 2R + 17025111 17025177 3'utr Dark FlyBase G12631.1 CAGTCCCAACATTCTGGTGGCGTCGGCACACAGTGCCCAGAAGACTGTGATATTCCAGCTGGAAAAG 16 17025162 0.952402022 6 16 73 1 1.431363764 0.222222222 0.375 0.62962963 16 0 0 27 2R:17025111-17025177 7 17 1284 FBgn0263864 792.71 19.97666667 30.85666667 0.021445421 0.850992825 0.550934428 -4 -4 -4 0.1 dme-bantam-3p 6mer3-8 TGATCT 2R 17025776 17025781 + 2R_17025776_17025781_+ 0.999868401 0.999937416 0.999902909 4.88E-05 Dark FBtr0086967 17023336 17026703 2R + 17025765 17025800 3'utr Dark FlyBase G16609.1 AAAAGTTCAACTGATCTACAGCATTGAAGAGGTCCA 10 17025776 0.913875658 2 10 48 1 1.230448921 0.176470588 0.4 0.647058824 10 0 0 17 2R:17025765-17025800 6 Dark FBtr0086967 17023336 17026703 TGATCT 6mer3-8 dme-bantam-3p 2R + 17025763 17025791 3'utr Dark FlyBase G12632.1 AGAAAAGTTCAACTGATCTACAGCATTGA 6 17025776 0.766501969 2 6 25 1 0.903089987 0.25 0.333333333 0.5 6 0 0 8 2R:17025763-17025791 6 7.5 1285 FBgn0263864 792.71 19.97666667 30.85666667 0.009461215 0.375438011 0.243059306 0 0 0 0.1 dme-miR-283-5p 6mer3-8 TGATAT 2R 17026612 17026617 + 2R_17026612_17026617_+ 0.999997357 0.999999837 0.999998597 1.70E-06 Dark FBtr0086968|FBtr0086967 17026427|17023336 17026703|17026703 2R + 17026598 17026634 3'utr Dark FlyBase G16611.1 CAGCTAACCAAGTATGATATCTCAGAGGGCGGTGGGT 11 17026612 0.749278143 2 10 57 0.923076923 1.079181246 0.692307692 0.181818182 0.307692308 11 1 0 12 2R:17026598-17026634 6 Dark FBtr0086968|FBtr0086967 17026427|17023336 17026703|17026703 TGATAT 6mer3-8 dme-miR-283-5p 2R + 17026595 17026637 3'utr Dark FlyBase G12633.1 ATGCAGCTAACCAAGTATGATATCTCAGAGGGCGGTGGGTGCG 8 17026612 0.762766389 3 8 45 1 1.113943352 0.769230769 0.5 0.692307692 8 0 0 13 2R:17026595-17026637 6 9.5 1286 FBgn0263864 792.71 19.97666667 30.85666667 0.011984206 0.475554814 0.307875122 0 0 0 0.1 dme-miR-968-5p 6mer3-8 ACTACT 2R 17044445 17044450 + 2R_17044445_17044450_+ 0.999859895 0.999996442 0.999928168 9.65E-05 RhoGEF2 FBtr0086969|FBtr0086970|FBtr0305083|FBtr0340124|FBtr0086971 17044319|17044319|17044319|17044319|17044319 17044653|17044653|17044653|17044653|17044653 2R + 17044421 17044542 3'utr RhoGEF2 FlyBase G16657.1 AGCCTTTCTTAGAGCATGCCTTTTACTACTGTTAATGTAGCTTCATTTGTTTTCTTAAAATATTATGTATTCCACAAGAGCCGATAACACTTTAAATTAAGTCTAACATTGTCCCCTCGTAA 27 17044441 0.840200575 14 27 195 1 1.462397998 0.068965517 0.074074074 0.137931034 27 0 0 29 2R:17044421-17044542 6 RhoGEF2 FBtr0086969|FBtr0086971|FBtr0340124|FBtr0305083|FBtr0086970 17044319|17044319|17044319|17044319|17044319 17044653|17044653|17044653|17044653|17044653 ACTACT 6mer3-8 dme-miR-968-5p 2R + 17044416 17044451 3'utr RhoGEF2 FlyBase G12669.1 CGAGTAGCCTTTCTTAGAGCATGCCTTTTACTACTG 11 17044442 0.690506111 4 9 93 0.875 0.84509804 0.1875 0.272727273 0.5 11 1 1 14 2R:17044416-17044451 6 8 1287 FBgn0023172 2916.61 41.36666667 63.45333333 0.00274291 0.193392425 0.126076907 4 3 3.5 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 2R 17053546 17053552 + 2R_17053546_17053552_+ 0.520018068 0.521173177 0.520595623 0.000816779 CG9646 FBtr0086974|FBtr0340125 17053524|17053524 17053855|17053855 2R + 17053547 17053673 3'utr CG9646 FlyBase G16672.1 GTGATTTATATGCTTTATAGTTCTCACATGTATTCCCTATTTATCGATCGAATGTGTGACCAGTCTGTGTGATCAGTCCCAGTTTGATTTATCAGTATATATGCTATGTTCTCGACCAATGTTGAGT 23 17053555 0.990850039 11 21 213 0.931034483 1.130333768 0.068965517 0.217391304 0.379310345 23 1 1 27 2R:17053547-17053673 5 CG9646 FBtr0086974|FBtr0340125 17053524|17053524 17053855|17053855 TGTGATT 7mer-m1 dme-miR-308-3p 2R + 17053541 17053576 3'utr CG9646 FlyBase G12680.1 GCAATTGTGATTTATATGCTTTATAGTTCTCACATG 9 17053556 0.673756293 7 9 96 1 1.204119983 0.0625 0.555555556 0.75 9 0 0 16 2R:17053541-17053576 7 8.5 1288 FBgn0034184 559.1833333 20.39333333 31.34666667 0.015200739 0.416802877 0.271161208 -9 -10 -9.5 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 2R 17088570 17088576 - 2R_17088570_17088576_- 0.652144362 0.782854615 0.717499489 0.092426069 Sply FBtr0087008|FBtr0087007 17088439|17088439 17088719|17088719 2R - 17088507 17088613 3'utr Sply FlyBase G24229.1 AATTTATATTAGGATGCAATTAGTGCTGTAATCGAGGGTACAAAACGTCGTTCTACGCGAAAATCTATCTACCTATGTTCATCCCATTTGTCAACATTCGTCGCTCT 16 17088582 0.982171086 8 14 106 0.85 1.230448921 0.45 0.1875 0.35 16 3 0 17 2R:17088507-17088613 7 Sply FBtr0087008|FBtr0087007 17088439|17088439 17088719|17088719 GTACAAA 7mer-A1 dme-miR-305-5p 2R - 17088561 17088606 3'utr Sply FlyBase G18348.1 ATTAGGATGCAATTAGTGCTGTAATCGAGGGTACAAAACGTCGTTC 9 17088585 0.978822283 4 6 47 0.888888889 0.903089987 0.222222222 0.666666667 0.833333333 9 1 1 16 2R:17088561-17088606 7 8 1289 FBgn0010591 556.6466667 33.54666667 51.29666667 0.014371774 0.238473768 0.155955553 6 9 7.5 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 17092972 17092979 + 2R_17092972_17092979_+ 0.625364269 0.625364269 0.625364269 0 CG6984 FBtr0086979 17092926 17093070 2R + 17092942 17092992 3'utr CG6984 FlyBase G16685.1 ATGAAATAATGAATCAAAACTGACCAATTGTGCATTTATACTTTTAAGCTT 29 17092970 0.853743806 8 28 236 1 1.544068044 0 0.172413793 0.314285714 29 0 0 35 2R:17092942-17092992 8 CG6984 FBtr0086979 17092926 17093070 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 17092944 17093002 3'utr CG6984 FlyBase G12690.1 GAAATAATGAATCAAAACTGACCAATTGTGCATTTATACTTTTAAGCTTGAATTGTCCA 22 17092969 0.991127551 9 20 210 0.9375 1.176091259 0.09375 0.409090909 0.59375 22 1 1 30 2R:17092944-17093002 8 23 1290 FBgn0034191 139.3066667 16.87666667 25.83666667 0.165103369 1.362828363 0.890207715 2 3 2.5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 17107370 17107375 + 2R_17107370_17107375_+ 1 0.994564609 0.997282304 0.003843408 CG30456 FBtr0273337|FBtr0333550|FBtr0273336 17107135|17107135|17107135 17107542|17107542|17107542 2R + 17107230 17107397 3'utr CG30456 FlyBase G16699.1 ACATCTGGAGCTGCCAGTGGCGGCCAATTGTCGGGGGCCATTGAGCCAAGTCAATATTCGAAATTGTTTCAAATTGCTGCTCATTGTTTGTGGCACAAGGAGATCGGGAGTCGAACGCCTTTCGCTTTGAATGCTAAGTAACCAAATATTGAATTATAAGTGTAACTT 64 17107378 0.806464372 18 60 475 0.947368421 1.556302501 0.276315789 0.171875 0.302631579 64 3 1 72 2R:17107230-17107397 6 CG30456 FBtr0273336|FBtr0333550|FBtr0273337 17107135|17107135|17107135 17107542|17107542|17107542 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 17107230 17107400 3'utr CG30456 FlyBase G12698.1 ACATCTGGAGCTGCCAGTGGCGGCCAATTGTCGGGGGCCATTGAGCCAAGTCAATATTCGAAATTGTTTCAAATTGCTGCTCATTGTTTGTGGCACAAGGAGATCGGGAGTCGAACGCCTTTCGCTTTGAATGCTAAGTAACCAAATATTGAATTATAAGTGTAACTTGTT 65 17107378 0.875417105 21 64 446 1 1.954242509 0.233333333 0.292307692 0.488888889 65 0 0 90 2R:17107230-17107400 6 19.5 1291 FBgn0050456 173 7.583333333 11.60333333 0.112716763 2.571428571 1.680551566 -8 -8 -8 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 17364026 17364033 + 2R_17364026_17364033_+ 0.500046182 0.500029422 0.500037802 1.19E-05 mbl FBtr0336940|FBtr0306604|FBtr0306606|FBtr0306603|FBtr0336941|FBtr0306601|FBtr0336942 17363985|17363985|17363985|17363985|17363985|17363985|17363985 17365386|17365386|17365386|17365386|17365386|17365386|17365386 2R + 17363975 17364093 stop_codon mbl FlyBase G16726.1 AAGACCTCCTAAGAACCCGGGCGATAACAATCTAAAAGTCCAAACACAACTGTACTTAATGCACCAAGCCATCGAACAGATGGAATAGTCACACCATTTTAGATTTATAGATATAAACA 304 17364025 0.959092407 10 299 1403 0.986072423 2.549003262 0.08356546 0.138157895 0.270194986 304 5 0 354 2R:17363975-17364093 8 mbl FBtr0336942|FBtr0306603|FBtr0336941|FBtr0306601|FBtr0306604|FBtr0306606|FBtr0336940 17363985|17363985|17363985|17363985|17363985|17363985|17363985 17365386|17365386|17365386|17365386|17365386|17365386|17365386 GTACTTAA 8mer-A1 dme-miR-252-5p 2R + 17364000 17364092 3'utr mbl FlyBase G12713.1 AACAATCTAAAAGTCCAAACACAACTGTACTTAATGCACCAAGCCATCGAACAGATGGAATAGTCACACCATTTTAGATTTATAGATATAAAC 195 17364025 0.892764008 6 188 905 0.967213115 2.16879202 0.101639344 0.394871795 0.613114754 195 9 1 295 2R:17364000-17364092 8 239 1292 FBgn0265487 1263.543333 28.89333333 44.05 0.189150616 8.271804338 5.425652667 1 1 1 0.1 dme-miR-999-3p 7mer-m8 AGTTAAC 2R 17364465 17364471 + 2R_17364465_17364471_+ 0.674485247 0.656826604 0.665655926 0.012486516 mbl FBtr0336940|FBtr0306604|FBtr0306606|FBtr0306603|FBtr0336941|FBtr0306601|FBtr0336942 17363985|17363985|17363985|17363985|17363985|17363985|17363985 17365386|17365386|17365386|17365386|17365386|17365386|17365386 2R + 17364410 17364486 3'utr mbl FlyBase G16728.1 GAGAAACAGATGTTAGATGATAGTAATACTTAAGTTCCTTTTTTGAATAGCTCTTAGTTAACTCTAGTTTATAGGAA 10 17364463 0.937767874 7 9 97 0.916666667 1.041392685 0 0.2 0.333333333 10 1 0 11 2R:17364410-17364486 7 mbl FBtr0336942|FBtr0306603|FBtr0336941|FBtr0306601|FBtr0306604|FBtr0306606|FBtr0336940 17363985|17363985|17363985|17363985|17363985|17363985|17363985 17365386|17365386|17365386|17365386|17365386|17365386|17365386 AGTTAAC 7mer-m8 dme-miR-999-3p 2R + 17364397 17364496 3'utr mbl FlyBase G12716.1 CAAGCGAACGGAAGAGAAACAGATGTTAGATGATAGTAATACTTAAGTTCCTTTTTTGAATAGCTCTTAGTTAACTCTAGTTTATAGGAAACGGTCACAC 11 17364449 0.989237958 8 10 93 1 1.176091259 0 0.363636364 0.533333333 11 0 0 15 2R:17364397-17364496 7 4 1293 FBgn0265487 1263.543333 28.89333333 44.05 0.003165701 0.13844024 0.090805902 2 16 9 0.1 dme-miR-184-3p 6mer2-7 CCGTCC 2R 17364695 17364700 + 2R_17364695_17364700_+ 0.999984744 0.999994805 0.999989775 7.14E-06 mbl FBtr0336940|FBtr0306604|FBtr0306606|FBtr0306603|FBtr0336941|FBtr0306601|FBtr0336942 17363985|17363985|17363985|17363985|17363985|17363985|17363985 17365386|17365386|17365386|17365386|17365386|17365386|17365386 2R + 17364617 17364722 3'utr mbl FlyBase G16730.1 AAACCTCTAATGCTGCTGCCGATGCTGGGTACAGTTGTGTATGCTTGTTGCTAGCTGCGGGTGCTTAATGCCATATTGCCGTCCCTGTCTCCCAAATGCGGTAGTT 165 17364693 0.768736806 15 159 1188 0.969543147 1.803912113 0.147208122 0.145454545 0.284263959 165 4 2 191 2R:17364617-17364722 6 mbl FBtr0336942|FBtr0306603|FBtr0336941|FBtr0306601|FBtr0306604|FBtr0306606|FBtr0336940 17363985|17363985|17363985|17363985|17363985|17363985|17363985 17365386|17365386|17365386|17365386|17365386|17365386|17365386 CCGTCC 6mer2-7 dme-miR-184-3p 2R + 17364679 17364721 3'utr mbl FlyBase G12718.1 GCTTAATGCCATATTGCCGTCCCTGTCTCCCAAATGCGGTAGT 62 17364693 0.745579698 5 58 426 0.947916667 1.959041392 0.135416667 0.370967742 0.59375 62 5 0 91 2R:17364679-17364721 6 104 1294 FBgn0265487 1263.543333 28.89333333 44.05 0.082308218 3.599446239 2.360953462 2 2 2 0.1 dme-miR-1012-3p 6mer2-7 TGACTA 2R 17405370 17405375 - 2R_17405370_17405375_- 0.998881242 0.872391576 0.935636409 0.089441654 CG6568 FBtr0086964|FBtr0340144 17405302|17405302 17405480|17405480 2R - 17405351 17405390 3'utr CG6568 FlyBase G24252.1 ATGCAATGTAGAAACTGACTATTAACAAGTACGATTAAAA 13 17405369 0.965291875 4 12 66 0.9375 1.176091259 0.125 0.230769231 0.375 13 1 0 15 2R:17405351-17405390 6 CG6568 FBtr0086964|FBtr0340144 17405302|17405302 17405480|17405480 TGACTA 6mer2-7 dme-miR-1012-3p 2R - 17405365 17405400 3'utr CG6568 FlyBase G18361.1 TGTATTGTTAATGCAATGTAGAAACTGACTATTAAC 8 17405369 0.956460221 5 7 51 0.928571429 1.113943352 0 0.25 0.571428571 8 1 0 13 2R:17405365-17405400 6 10 1295 FBgn0034210 337.2533333 24.08333333 37.00333333 0.029651301 0.415224913 0.270245924 -6 -6 -6 0.1 dme-miR-7-5p 7mer-m8 GTCTTCC 2R 17414419 17414425 - 2R_17414419_17414425_- 0.705950313 0.705950313 0.705950313 0 cnk FBtr0086962|FBtr0340214 17413968|17413968 17414572|17414572 2R - 17414401 17414476 3'utr cnk FlyBase G24265.1 ATATAGCGATATTCTCGTACGATTTAGGTATACAACTTGTTCATTTTGATCGTCTTCCCTGTCTGTCCACCAGAAA 93 17414422 0.697757003 14 89 1018 0.963302752 1.720159303 0.220183486 0.150537634 0.275229358 93 3 1 105 2R:17414401-17414476 7 cnk FBtr0086962|FBtr0340214 17413968|17413968 17414572|17414572 GTCTTCC 7mer-m8 dme-miR-7-5p 2R - 17414402 17414486 3'utr cnk FlyBase G18369.1 TATATATTATATATAGCGATATTCTCGTACGATTTAGGTATACAACTTGTTCATTTTGATCGTCTTCCCTGTCTGTCCACCAGAA 65 17414422 0.991835438 14 65 715 1 1.986771734 0.206185567 0.369230769 0.577319588 65 0 0 97 2R:17414402-17414486 7 73.5 1296 FBgn0021818 1145.12 24.51333333 37.43 0.064185413 2.998368235 1.963665509 -3 -3 -3 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA 2R 17414562 17414567 - 2R_17414562_17414567_- 0.919622688 0.99999841 0.959810549 0.056834203 cnk FBtr0086962|FBtr0340214 17413968|17413968 17414572|17414572 2R - 17414523 17414624 stop_codon cnk FlyBase G24266.1 CAACACCAACACCAACAGCAGTCCCAGTGGCGGCGAACACCATCAGACCTAGATGTGTGATGAAAACTATTGTGAATGCTCGCGGGGATTAGCCCCCGTTTA 138 17414555 0.999691708 9 128 899 0.931677019 1.273001272 0.360248447 0.123188406 0.248447205 138 4 7 150 2R:17414523-17414624 6 cnk FBtr0086962|FBtr0340214 17413968|17413968 17414572|17414572 TGATGA 6mer3-8 dme-miR-2a-2-5p 2R - 17414524 17414588 stop_codon cnk FlyBase G18370.1 ACACCATCAGACCTAGATGTGTGATGAAAACTATTGTGAATGCTCGCGGGGATTAGCCCCCGTTT 87 17414555 0.65580968 11 80 511 0.93220339 1.740362689 0.474576271 0.298850575 0.483050847 87 7 1 110 2R:17414524-17414588 6 84 1297 FBgn0021818 1145.12 24.51333333 37.43 0.073354758 3.426706554 2.244189153 -12 -12 -12 0.1 dme-miR-184-5p 6mer3-8 TGATAA 2R 17448658 17448663 - 2R_17448658_17448663_- 0.999714503 0.999531381 0.999622942 0.000129471 mthl3 FBtr0340211|FBtr0340212|FBtr0086955 17448531|17448531|17448531 17449117|17449117|17449117 2R - 17448608 17448823 3'utr mthl3 FlyBase G24317.1 GTGCCATCAAAGCGAGATCAAAGCAACTACTACATGGGGATATGTACGAATCTTATAGGCATGAATACTCGGCATTTATATACCCTGGTCTATTATTATGGATGGAGGATAAAAACTCAGGAAAATACTTTTCGCATCAGCACTTATGTATGCTCACTCGTGATAATAATTTCGTAATAATTCGTACTGTTTTTACTGCCTCAACTTAATTCAAAG 61 17448657 0.971349439 24 58 411 0.961038961 1.86923172 0.233766234 0.196721311 0.363636364 61 3 0 74 2R:17448608-17448823 6 mthl3 FBtr0086955|FBtr0340212|FBtr0340211 17448531|17448531|17448531 17449117|17449117|17449117 TGATAA 6mer3-8 dme-miR-184-5p 2R - 17448646 17448790 3'utr mthl3 FlyBase G18404.1 ATGGGGATATGTACGAATCTTATAGGCATGAATACTCGGCATTTATATACCCTGGTCTATTATTATGGATGGAGGATAAAAACTCAGGAAAATACTTTTCGCATCAGCACTTATGTATGCTCACTCGTGATAATAATTTCGTAAT 28 17448693 0.949251958 19 25 189 0.948717949 1.091080469 0.102564103 0.321428571 0.512820513 28 0 2 37 2R:17448646-17448790 6 20.5 1298 FBgn0028956 336.38 20.09333333 30.48333333 0.060942981 1.020238885 0.672498633 -6 30 12 0.1 dme-miR-317-3p 6mer2-7 GTGTTC 2R 17464316 17464321 + 2R_17464316_17464321_+ 0.999859596 0.999823115 0.999841356 2.58E-05 CG14478 FBtr0345418|FBtr0086921|FBtr0086922|FBtr0345417 17464232|17464232|17464232|17464232 17465795|17465580|17465580|17465580 2R + 17464246 17464400 3'utr CG14478 FlyBase G16785.1 GAGCAACCAGGATGTGGACAGGGCTTAGAGCACTTGACCGCTATGGCGGTCGTGCAGGCGGACAATGATCGTGTTCCAGAACCTGATCCGAGGAGTAGGCGCTCCTCGGCGTCTGTCAGAGGCCGGAGAGCGAAGGAAGAAAATCTTTATATACA 89 17464317 0.946717142 15 85 370 0.972477064 2.025305865 0.293577982 0.204545455 0.357798165 88 3 0 106 2R:17464246-17464400 6 CG14478 FBtr0345417|FBtr0086922|FBtr0086921|FBtr0345418 17464232|17464232|17464232|17464232 17465580|17465580|17465580|17465795 GTGTTC 6mer2-7 dme-miR-317-3p 2R + 17464288 17464341 3'utr CG14478 FlyBase G12765.2 ATGGCGGTCGTGCAGGCGGACAATGATCGTGTTCCAGAACCTGATCCGAGGAGT 73 17464317 0.672446897 4 69 305 0.935779817 2.008600172 0.321100917 0.383561644 0.587155963 73 7 0 102 2R:17464288-17464341 6 68.5 1299 FBgn0028953 686.9066667 21.63 33.22666667 0.099722427 3.166897827 2.061597111 -1 -1 -1 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT 2R 17465345 17465351 + 2R_17465345_17465351_+ 0.658993431 0.65898909 0.65899126 3.04E-06 CG14478 FBtr0345418|FBtr0086921|FBtr0086922|FBtr0345417 17464232|17464232|17464232|17464232 17465795|17465580|17465580|17465580 2R + 17465323 17465372 3'utr CG14478 FlyBase G16790.1 TTCCTTGACTACCACCACCCATGGCAGCTTCCTGGGAGCTCCATTGGGGG 51 17465344 0.985752785 2 49 222 0.946428571 1.72427587 0.142857143 0.098039216 0.178571429 51 3 0 53 2R:17465323-17465372 7 CG14478 FBtr0345417|FBtr0086922|FBtr0086921|FBtr0345418 17464232|17464232|17464232|17464232 17465580|17465580|17465580|17465795 GGCAGCT 7mer-m8 dme-miR-980-3p 2R + 17465315 17465365 3'utr CG14478 FlyBase G12770.1 ACGCAAACTTCCTTGACTACCACCACCCATGGCAGCTTCCTGGGAGCTCCA 30 17465344 0.99460853 3 30 130 1 1.612783857 0.12195122 0.366666667 0.536585366 30 0 0 41 2R:17465315-17465365 7 39.5 1300 FBgn0028953 686.9066667 21.63 33.22666667 0.057504173 1.82616736 1.188804173 1 1 1 0.1 dme-miR-304-5p 8mer-A1 TGAGATTA 2R 17473681 17473688 + 2R_17473681_17473688_+ 0.625363306 0.625363357 0.625363331 7.07E-08 qkr54B FBtr0306248|FBtr0331464 17472244|17473146 17474648|17475129 2R + 17473656 17473703 3'utr qkr54B FlyBase G16798.1 TGACGGTCGGTAGAGACAGAATCTATGAGATTAATTAACTTAATAGAA 14 17473681 0.981784032 2 14 95 1 1.278753601 0 0.214285714 0.421052632 14 0 0 19 2R:17473656-17473703 8 qkr54B FBtr0306248|FBtr0331464 17472244|17473146 17474648|17475129 TGAGATTA 8mer-A1 dme-miR-304-5p 2R + 17473656 17473704 3'utr qkr54B FlyBase G12775.1 TGACGGTCGGTAGAGACAGAATCTATGAGATTAATTAACTTAATAGAAT 10 17473681 0.783293786 3 8 68 0.714285714 0.698970004 0 0.2 0.428571429 10 3 1 10 2R:17473656-17473704 8 10 1301 FBgn0022987 869.43 42.83333333 65.55 0.011501789 0.233463035 0.152555301 0 0 0 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 17517269 17517276 + 2R_17517269_17517276_+ 0.500120229 0.500120309 0.500120269 7.07E-08 CG4853 FBtr0340216|FBtr0086938|FBtr0086939 17517103|17517103|17517103 17517445|17517445|17517445 2R + 17517246 17517282 3'utr CG4853 FlyBase G16812.1 ACTTCCACTGTGTTTGTTAATTTGTACTTAAGCTTAG 17 17517268 0.755638286 4 17 189 1 1.278753601 0.157894737 0.117647059 0.210526316 17 0 0 19 2R:17517246-17517282 8 CG4853 FBtr0086939|FBtr0340216|FBtr0086938 17517103|17517103|17517103 17517445|17517445|17517445 GTACTTAA 8mer-A1 dme-miR-252-5p 2R + 17517231 17517289 3'utr CG4853 FlyBase G12784.1 AATAATAACTCTTACACTTCCACTGTGTTTGTTAATTTGTACTTAAGCTTAGACGACGG 18 17517268 0.855340985 6 17 161 0.962962963 1.414973348 0.259259259 0.388888889 0.592592593 18 1 0 26 2R:17517231-17517289 8 16 1302 FBgn0034230 943.6633333 39.8 60.59666667 0.016955199 0.40201005 0.264040926 1 1 1 0.1 dme-miR-965-3p 8mer-A1 TACGCTTA 2R 17555736 17555743 + 2R_17555736_17555743_+ 0.625358675 0.625360604 0.625359639 1.34E-06 MESR4 FBtr0086946|FBtr0113090|FBtr0340220|FBtr0340219 17555653|17555653|17555653|17555653 17556289|17556289|17556289|17556289 2R + 17555705 17555792 3'utr MESR4 FlyBase G16855.2 CTATAACTACAAACCCCACTACAGAATGGATTACGCTTATTAATTGATAAAAACATATAGTCGCTCATCCCTGGCGATCGTCTAAGGA 1513 17555735 0.834839678 14 1488 12703 0.983954155 2.535800291 0.026361032 0.134170522 0.249283668 1513 24 4 1717 2R:17555705-17555792 8 MESR4 FBtr0340219|FBtr0340220|FBtr0113090|FBtr0086946 17555653|17555653|17555653|17555653 17556289|17556289|17556289|17556289 TACGCTTA 8mer-A1 dme-miR-965-3p 2R + 17555655 17555797 3'utr MESR4 FlyBase G12825.1 ATGAACACGGATTAACTGCATCATTGGTTCCTCCTACCACAAATAAACAACTATAACTACAAACCCCACTACAGAATGGATTACGCTTATTAATTGATAAAAACATATAGTCGCTCATCCCTGGCGATCGTCTAAGGATAAGA 808 17555735 0.825484833 20 790 6518 0.981974922 2.49589108 0.028996865 0.403465347 0.622257053 808 20 3 1253 2R:17555655-17555797 8 1144.5 1303 FBgn0034240 1589.276667 23.95 36.81 0.720138931 47.78705637 31.09209454 1 1 1 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT 2R 17572155 17572161 + 2R_17572155_17572161_+ 0.65899379 0.658996966 0.658995378 2.26E-06 POSH FBtr0086828 17572001 17572322 2R + 17572120 17572180 3'utr POSH FlyBase G16875.1 AAAAAGAAACCGTTTTGTACTCTTCCAATCGAATGGGCAGCTCGCCGTTGTACTTTTTTAT 94 17572153 0.934780543 9 90 665 0.951456311 1.991226076 0.330097087 0.085106383 0.165048544 94 5 0 98 2R:17572120-17572180 7 POSH FBtr0086828 17572001 17572322 GGCAGCT 7mer-m8 dme-miR-980-3p 2R + 17572127 17572179 3'utr POSH FlyBase G12838.1 AACCGTTTTGTACTCTTCCAATCGAATGGGCAGCTCGCCGTTGTACTTTTTTA 71 17572153 0.931401221 9 67 478 0.942307692 1.514104821 0.182692308 0.338028169 0.548076923 71 4 2 98 2R:17572127-17572179 7 76.5 1304 FBgn0040294 488.92 18.72 28.71333333 0.156467316 4.086538462 2.664267472 2 2 2 0.1 dme-miR-305-3p 6mer2-7 TGTGCC 2R 17572279 17572284 + 2R_17572279_17572284_+ 0.999997011 0.999983053 0.999990032 9.83E-06 POSH FBtr0086828 17572001 17572322 2R + 17572227 17572320 3'utr POSH FlyBase G16876.1 GTTACTTAAGCCTTAGCGATTAGTTAGCTAGAGAAATAATCTAACCGATCCTTGTGCCCTCTACAAAGTTATTTGTAATATACGATACTCAGTA 32 17572279 0.71423791 11 30 209 0.948717949 1.091080469 0.128205128 0.1875 0.333333333 32 0 2 37 2R:17572227-17572320 6 POSH FBtr0086828 17572001 17572322 TGTGCC 6mer2-7 dme-miR-305-3p 2R + 17572261 17572296 3'utr POSH FlyBase G12839.1 AATAATCTAACCGATCCTTGTGCCCTCTACAAAGTT 11 17572280 0.703449157 2 11 63 1 1.230448921 0.352941176 0.454545455 0.647058824 11 0 0 17 2R:17572261-17572296 6 16 1305 FBgn0040294 488.92 18.72 28.71333333 0.03272519 0.854700855 0.557232412 0 -1 -0.5 0.1 dme-miR-305-3p 8mer-m1 ATGTGCCG 2R 17573205 17573212 + 2R_17573205_17573212_+ 0.628736567 0.628736564 0.628736566 0 CG42239 FBtr0290307 17573200 17573330 2R + 17573156 17573220 stop_codon CG42239 FlyBase G16880.1 TAATTGCTATCAAGACTACGAACCAGAGAAGCAAAAGGATACGTAGACTATGTGCCGGGTTGGAT 23 17573206 0.750190263 11 22 103 0.96 1.380211242 0.36 0.086956522 0.16 23 1 0 24 2R:17573156-17573220 8 CG42239 FBtr0290307 17573200 17573330 ATGTGCCG 8mer-m1 dme-miR-305-3p 2R + 17573179 17573226 stop_codon CG42239 FlyBase G12841.2 CAGAGAAGCAAAAGGATACGTAGACTATGTGCCGGGTTGGATTACCAG 32 17573206 0.636370999 5 30 147 0.9375 1.352182518 0.395833333 0.375 0.583333333 32 2 1 45 2R:17573179-17573226 8 23.5 1306 FBgn0250868 189.67 62.33666667 95.58 0.123899404 0.376985188 0.245867336 -1 -1 -1 0.1 dme-miR-11-3p 7mer-m1 TGTGATG 2R 17573277 17573283 + 2R_17573277_17573283_+ 0.611752397 0.611771387 0.611761892 1.34E-05 CG42239 FBtr0290307 17573200 17573330 2R + 17573247 17573298 3'utr CG42239 FlyBase G16881.1 TTTATTGCATATATGTATGTATGCAAATTGTGTGATGAATAGAAGAGGGTTT 29 17573275 0.977089508 6 27 214 0.916666667 1.51851394 0.333333333 0.24137931 0.388888889 29 3 0 33 2R:17573247-17573298 7 CG42239 FBtr0290307 17573200 17573330 TGTGATG 7mer-m1 dme-miR-11-3p 2R + 17573238 17573302 3'utr CG42239 FlyBase G12842.1 TTTTATACTTTTATTGCATATATGTATGTATGCAAATTGTGTGATGAATAGAAGAGGGTTTTTGA 30 17573275 0.982820351 6 30 232 1 1.653212514 0.244444444 0.433333333 0.622222222 30 0 0 45 2R:17573238-17573302 7 28.5 1307 FBgn0250868 189.67 62.33666667 95.58 0.15026098 0.457194802 0.298179535 2 2 2 0.1 dme-miR-999-3p 6mer2-7 GTTAAC 2R 17574753 17574758 + 2R_17574753_17574758_+ 0.99829549 0.999999979 0.999147735 0.001205264 Rab4 FBtr0086830 17574541 17574979 2R + 17574723 17574768 3'utr Rab4 FlyBase G16889.1 AATTACCACTTTGAAAACCTATGATTTCGGGTTAACCCCAAATGTT 36 17574745 0.703837061 6 34 275 0.928571429 1.591064607 0.095238095 0.166666667 0.285714286 36 3 0 39 2R:17574723-17574768 6 Rab4 FBtr0086830 17574541 17574979 GTTAAC 6mer2-7 dme-miR-999-3p 2R + 17574723 17574765 3'utr Rab4 FlyBase G12846.1 AATTACCACTTTGAAAACCTATGATTTCGGGTTAACCCCAAAT 16 17574744 0.634952727 6 14 115 0.913043478 1.322219295 0.043478261 0.3125 0.52173913 16 2 0 21 2R:17574723-17574765 6 23.5 1308 FBgn0016701 790.7133333 73.45333333 112.1433333 0.02972 0.319931022 0.20955325 8 9 8.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 2R 17574846 17574851 + 2R_17574846_17574851_+ 1 0.999985994 0.999992997 9.90E-06 Rab4 FBtr0086830 17574541 17574979 2R + 17574769 17574865 3'utr Rab4 FlyBase G16890.1 ACTTACTATAATTTGTAATTCGTGAAGCACTAGAGCCCTCGAGCAACAAATGATGTATGGCTATAAGCACATGGATCTGATCTAGAGGATGAACAGA 27 17574846 0.966987433 11 25 137 0.939393939 1.491361694 0.575757576 0.185185185 0.333333333 27 2 0 31 2R:17574769-17574865 6 Rab4 FBtr0086830 17574541 17574979 TGATCT 6mer3-8 dme-bantam-3p 2R + 17574817 17574886 3'utr Rab4 FlyBase G12847.1 AATGATGTATGGCTATAAGCACATGGATCTGATCTAGAGGATGAACAGAATACACTCGGCATTTTTAATG 17 17574858 0.958350866 7 17 89 1 1.447158031 0.357142857 0.411764706 0.642857143 17 0 0 28 2R:17574817-17574886 6 14.5 1309 FBgn0016701 790.7133333 73.45333333 112.1433333 0.018337872 0.197404248 0.129298814 0 -12 -6 0.1 dme-miR-305-5p 6mer3-8 AGTACA 2R 17603727 17603732 + 2R_17603727_17603732_+ 0.731523503 0.999999996 0.86576175 0.189841554 Smurf FBtr0333168|FBtr0086833 17603185|17603185 17604461|17603981 2R + 17603637 17603731 3'utr Smurf FlyBase G16908.1 TATACATATATCATAGTTGATAATTAGGCATAAAAACAACTTTTAATTGTAGGCATTGGACGGGCAAATTTTTGTGCTTTTGTTTAATTTAGTAC 18 17603715 0.986211582 11 17 152 1 1.301029996 0.05 0.111111111 0.2 18 0 0 20 2R:17603637-17603731 5 Smurf FBtr0086833|FBtr0333168 17603185|17603185 17603981|17604461 AGTACA 6mer3-8 dme-miR-305-5p 2R + 17603671 17603731 3'utr Smurf FlyBase G12859.1 AACAACTTTTAATTGTAGGCATTGGACGGGCAAATTTTTGTGCTTTTGTTTAATTTAGTAC 7 17603712 0.994556014 4 5 70 0.818181818 0.954242509 0 0.571428571 0.727272727 7 2 0 9 2R:17603671-17603731 5 2.5 1310 FBgn0029006 1710.306667 42.38 65.34 0.001461726 0.05899009 0.038261402 12 15 13.5 0.1 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2R 17603820 17603825 + 2R_17603820_17603825_+ 0.764761188 0.86995878 0.817359984 0.074385936 Smurf FBtr0333168|FBtr0086833 17603185|17603185 17604461|17603981 2R + 17603815 17603904 3'utr Smurf FlyBase G16909.1 AGTCCTTTGACACACTTATCGACTTACCCGCTCGCATATTTTATAACTATGCGAGCAAAATGATTGCCTACCCAAAAATAAGATAGGGAA 37 17603833 0.976456222 8 34 228 0.95 1.579783597 0 0.081081081 0.15 37 2 0 38 2R:17603815-17603904 6 Smurf FBtr0086833|FBtr0333168 17603185|17603185 17603981|17604461 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2R + 17603811 17603854 3'utr Smurf FlyBase G12860.1 AAATAGTCCTTTGACACACTTATCGACTTACCCGCTCGCATATT 11 17603833 0.912038211 6 10 61 0.928571429 0.812913357 0.071428571 0.181818182 0.357142857 11 0 1 13 2R:17603811-17603854 6 11.5 1311 FBgn0029006 1710.306667 42.38 65.34 0.00672394 0.271354412 0.176002449 -13 -13 -13 0.1 dme-miR-276a-3p 6mer3-8 AGTTCC 2R 17670655 17670660 + 2R_17670655_17670660_+ 0.719277334 0.882959848 0.801118591 0.115741006 CG30109 FBtr0340271 17670505 17670748 2R + 17670616 17670675 3'utr CG30109 FlyBase G16941.1 CAGCCTAGGTCTACCAAGTACCAGAAGCAGCTTTGGTTTAGTTCCATGACTCGTATCCTT 12 17670662 0.823895082 6 12 88 1 1.113943352 0 0.083333333 0.153846154 12 0 0 13 2R:17670616-17670675 6 CG30109 FBtr0340271 17670505 17670748 AGTTCC 6mer3-8 dme-miR-276a-3p 2R + 17670606 17670670 3'utr CG30109 FlyBase G12890.1 AGTGGAGGAACAGCCTAGGTCTACCAAGTACCAGAAGCAGCTTTGGTTTAGTTCCATGACTCGTA 13 17670649 0.968555069 6 13 71 1 1.447158031 0.178571429 0.615384615 0.821428571 13 0 0 28 2R:17670606-17670670 6 6 1312 FBgn0050109 105.4166667 22.59 34.48 0.056916996 0.26560425 0.174013921 -7 6 -0.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 17673099 17673105 - 2R_17673099_17673105_- 0.801970338 0.801970368 0.801970353 7.07E-08 Sema-1b FBtr0086891|FBtr0086891|FBtr0086891|FBtr0086890|FBtr0086890|FBtr0086890 17672837|17672837|17672837|17672837|17672837|17672837 17674309|17674309|17674309|17674309|17674309|17674309 2R - 17673061 17673131 3'utr Sema-1b FlyBase G24433.1 AAACGTAATGTAATGATTTCTCATATTGTGATAGATTTTATTGAAATTTTAGAAAGATGAAATGATATGCC 147 17673106 0.991906343 8 140 1552 0.956756757 1.645913275 0.459459459 0.210884354 0.372972973 147 5 3 177 2R:17673061-17673131 7 Sema-1b FBtr0086890|FBtr0086890|FBtr0086890|FBtr0086891|FBtr0086891|FBtr0086891 17672837|17672837|17672837|17672837|17672837|17672837 17674309|17674309|17674309|17674309|17674309|17674309 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 17673090 17673132 3'utr Sema-1b FlyBase G18485.1 AAAACGTAATGTAATGATTTCTCATATTGTGATAGATTTTATT 95 17673106 0.751582062 6 93 987 0.98630137 1.857332496 0.328767123 0.347368421 0.575342466 95 1 1 144 2R:17673090-17673132 7 120 1313 FBgn0016059 2585.713333 78.05 119.2733333 0.046408857 1.537475977 1.006092449 1 1 1 0.1 dme-miR-282-5p 6mer2-7 GAGGCT 2R 17673567 17673572 - 2R_17673567_17673572_- 0.999997872 0.999995573 0.999996722 1.63E-06 Sema-1b FBtr0086891|FBtr0302161|FBtr0086890 17672837|17673285|17672837 17674309|17674309|17674309 2R - 17673537 17673638 3'utr Sema-1b FlyBase G24435.1 TAAGGAATTGAACATAGAATGTAATTAAAAGTACGAACTAGGCTAAGAAACGAAGAAAACTTCTATGAGGCTGTTTGATAAGAACTGACACCGCAGCCCCCA 250 17673573 0.99021527 11 243 1776 0.975945017 1.976197085 0.18556701 0.144 0.264604811 250 5 2 284 2R:17673537-17673638 6 Sema-1b FBtr0086890|FBtr0302161|FBtr0086891 17672837|17673285|17672837 17674309|17674309|17674309 GAGGCT 6mer2-7 dme-miR-282-5p 2R - 17673535 17673594 3'utr Sema-1b FlyBase G18488.1 AAGAAACGAAGAAAACTTCTATGAGGCTGTTTGATAAGAACTGACACCGCAGCCCCCACA 170 17673573 0.981792446 8 163 1198 0.958333333 1.662757832 0.2375 0.311764706 0.5125 170 6 4 230 2R:17673535-17673594 6 202.5 1314 FBgn0016059 2585.713333 78.05 119.2733333 0.078314946 2.594490711 1.697781007 1 1 1 0.1 dme-miR-278-3p 6mer3-8 CCCACC 2R 17674209 17674214 - 2R_17674209_17674214_- 0.858410052 0.98895256 0.923681306 0.092307487 Sema-1b FBtr0086891|FBtr0302161|FBtr0086890 17672837|17673285|17672837 17674309|17674309|17674309 2R - 17674183 17674316 stop_codon Sema-1b FlyBase G24438.1 CATCTAGTGGCCTTGTGAGGGCAGCCAACTGCAAAATTAGTCGAATTTCTATACTCTAAAACATATTTTCGTTGTTTATGTTGCTGTTAGTTATAGTAACCCCCCACCCAATTTGCGAATAATGTAAACGACAG 34 17674205 0.827135904 18 33 224 0.975609756 1.602059991 0.170731707 0.205882353 0.341463415 34 1 0 40 2R:17674183-17674316 6 Sema-1b FBtr0086890|FBtr0302161|FBtr0086891 17672837|17673285|17672837 17674309|17674309|17674309 CCCACC 6mer3-8 dme-miR-278-3p 2R - 17674202 17674239 3'utr Sema-1b FlyBase G18492.1 ATGTTGCTGTTAGTTATAGTAACCCCCCACCCAATTTG 8 17674230 0.873185365 4 7 54 0.769230769 1 0.076923077 0.375 0.615384615 8 3 0 10 2R:17674202-17674239 6 11 1315 FBgn0016059 2585.713333 78.05 119.2733333 0.004254145 0.140935298 0.092225141 -9 16 3.5 0.1 dme-bantam-3p 6mer2-7 GATCTC 2R 17690185 17690190 + 2R_17690185_17690190_+ 0.999995185 0.999999729 0.999997457 3.18E-06 HPS4 FBtr0086839|FBtr0086840 17690041|17690041 17690822|17690822 2R + 17690145 17690210 3'utr HPS4 FlyBase G16946.1 GAATAGCCAACTTAATGCCATCCACTGTTATTTCATTTGCGATCTCTGGCTGATTCCTTCGTGAGT 258 17690181 0.890951336 11 244 2630 0.948717949 1.772321707 0.298076923 0.186046512 0.326923077 258 12 4 296 2R:17690145-17690210 6 HPS4 FBtr0086839|FBtr0086840 17690041|17690041 17690822|17690822 GATCTC 6mer2-7 dme-bantam-3p 2R + 17690130 17690211 3'utr HPS4 FlyBase G12894.1 GTCTGGGTCCCCGAAGAATAGCCAACTTAATGCCATCCACTGTTATTTCATTTGCGATCTCTGGCTGATTCCTTCGTGAGTC 153 17690181 0.879159978 15 140 1519 0.894495413 1.511883361 0.408256881 0.320261438 0.52293578 153 18 5 195 2R:17690130-17690211 6 157.5 1316 FBgn0034261 255.3 8.836666667 13.49666667 0.616921269 17.82346284 11.66954804 4 4 4 0.1 dme-miR-190-5p 6mer2-7 CATATC 2R 17725246 17725251 - 2R_17725246_17725251_- 0.999687837 0.999760128 0.999723983 5.11E-05 Snx16 FBtr0086885 17725028 17725381 2R - 17725219 17725323 3'utr Snx16 FlyBase G24461.1 ATTATGCTGAGCATAACTCTACGCAACTGCGCCGCTTGGATGCAAATCCAATACAATAATACAAACCAAGTGCATATCGAGGGGTTGGCCCCTACAGTGCTTTAG 85 17725253 0.959123511 10 83 400 0.97826087 1.954242509 0.010869565 0.082352941 0.152173913 85 2 0 90 2R:17725219-17725323 6 Snx16 FBtr0086885 17725028 17725381 CATATC 6mer2-7 dme-miR-190-5p 2R - 17725227 17725267 3'utr Snx16 FlyBase G18506.1 TAATACAAACCAAGTGCATATCGAGGGGTTGGCCCCTACAG 29 17725253 0.97676911 2 28 134 0.981132075 1.716003344 0 0.482758621 0.716981132 29 1 0 52 2R:17725227-17725267 6 55 1317 FBgn0034265 197.3333333 14.34666667 22.20333333 0.278716216 3.833643123 2.47710554 2 2 2 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 2R 17734456 17734461 - 2R_17734456_17734461_- 0.999999998 0.999999994 0.999999996 0 CG6406 FBtr0086883|FBtr0086884 17734417|17734417 17735315|17735315 2R - 17734426 17734474 3'utr CG6406 FlyBase G24467.1 TATTTATTGAACGTTGACTTGAACCATGTTATTGATTTAAAATAAATAC 9 17734461 0.938153825 3 9 82 1 0.954242509 0.222222222 0 0 9 0 0 9 2R:17734426-17734474 6 CG6406 FBtr0086883|FBtr0086884 17734417|17734417 17735315|17735315 TTGACT 6mer3-8 dme-miR-1012-3p 2R - 17734427 17734483 3'utr CG6406 FlyBase G18510.1 ACATACAAATATTTATTGAACGTTGACTTGAACCATGTTATTGATTTAAAATAAATA 9 17734461 0.75691775 5 9 78 1 1.113943352 0.076923077 0.222222222 0.461538462 9 0 0 13 2R:17734427-17734483 6 8.5 1318 FBgn0034269 376.6666667 16.84333333 25.91666667 0.022566372 0.504650703 0.327974277 0 0 0 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 17734916 17734921 - 2R_17734916_17734921_- 0.99999933 0.999917797 0.999958563 5.76E-05 CG6406 FBtr0086883|FBtr0086884 17734417|17734417 17735315|17735315 2R - 17734768 17734933 3'utr CG6406 FlyBase G24468.1 TCGCCACCTACCGCTGTGTATTAGCCGAATAGAACCGTGGCTCGAAATTTGAATTTATGGCATAAGCATCGTTTGAGTTTGTTGACTTTGATGGGTTTTCTTAGTTGTTCGTATGTATTATCGTATTCCAAATCCAATTGTTGGTTAGATTAAGTGTTGCTAGGAC 19 17734913 0.984658693 13 19 168 1 1.278753601 0.315789474 0 0 19 0 0 19 2R:17734768-17734933 6 CG6406 FBtr0086883|FBtr0086884 17734417|17734417 17735315|17735315 GCTGTG 6mer2-7 dme-miR-1008-3p 2R - 17734880 17734943 3'utr CG6406 FlyBase G18511.1 ATGTGTACATTCGCCACCTACCGCTGTGTATTAGCCGAATAGAACCGTGGCTCGAAATTTGAAT 10 17734925 0.746540287 8 9 59 0.866666667 0.636822098 0.2 0.4 0.6 10 0 2 13 2R:17734880-17734943 6 6.5 1319 FBgn0034269 376.6666667 16.84333333 25.91666667 0.017256637 0.385909361 0.250803859 -8 4 -2 0.1 dme-miR-92b-3p 7mer-m8 GTGCAAT 2R 17743661 17743667 + 2R_17743661_17743667_+ 0.53044557 0.658943518 0.594694544 0.090861736 CG4996 FBtr0086864 17743444 17743969 2R + 17743532 17743682 3'utr CG4996 FlyBase G16974.1 ACGTGTAATTAACATTCCGTTTAGTTCAAATTAACATTGTGTTTAAGGCTAATGATTCTACCTTAGTTATACAGGCGATCTCCATGAAGTACTTCGTTTCAAATTTAGAATCTCCCAAACCCTCCTTAAGTGCAATCTATCCTATAATCTT 154 17743657 0.789395629 24 147 1196 0.95480226 1.75076545 0.15819209 0.12987013 0.242937853 154 6 2 169 2R:17743532-17743682 7 CG4996 FBtr0086864 17743444 17743969 GTGCAAT 7mer-m8 dme-miR-92b-3p 2R + 17743486 17743680 3'utr CG4996 FlyBase G12917.1 AACCCCAAACTAACTTTGTTAGTAGATCAATCTCATGACATTCTTTACGTGTAATTAACATTCCGTTTAGTTCAAATTAACATTGTGTTTAAGGCTAATGATTCTACCTTAGTTATACAGGCGATCTCCATGAAGTACTTCGTTTCAAATTTAGAATCTCCCAAACCCTCCTTAAGTGCAATCTATCCTATAATC 127 17743657 0.850157595 22 116 980 0.93442623 1.755874856 0.147540984 0.322834646 0.530054645 127 10 2 171 2R:17743486-17743680 7 30 1320 FBgn0034271 397.55 13.71666667 20.99666667 0.075462206 2.187120292 1.428798222 4 4 4 0.1 dme-miR-304-5p 8mer-A1 TGAGATTA 2R 17841112 17841119 + 2R_17841112_17841119_+ 0.625362925 0.625360849 0.625361887 1.48E-06 grh FBtr0300539|FBtr0306625|FBtr0300541|FBtr0299705|FBtr0299707|FBtr0345791|FBtr0299706 17840873|17840873|17840873|17840873|17840873|17840873|17840873 17842820|17841528|17841528|17841613|17841613|17841613|17841613 2R + 17841090 17841127 5'utr grh FlyBase G17014.1 GATTTAGTTATTTTAGCAACAATGAGATTATCTAAAAT 17 17841112 0.952336697 3 16 133 1 1.230448921 0 0 0 17 0 0 17 2R:17841090-17841127 8 grh FBtr0299706|FBtr0299707|FBtr0345791|FBtr0300541|FBtr0299705|FBtr0300539|FBtr0306625 17840873|17840873|17840873|17840873|17840873|17840873|17840873 17841613|17841613|17841613|17841528|17841613|17842820|17841528 TGAGATTA 8mer-A1 dme-miR-304-5p 2R + 17841095 17841144 5'utr grh FlyBase G12955.1 AGTTATTTTAGCAACAATGAGATTATCTAAAATTGTTTGATCAAATTTTA 13 17841112 0.979994809 2 12 91 1 1.278753601 0.105263158 0.384615385 0.578947368 13 0 0 19 2R:17841095-17841144 8 13.5 1321 FBgn0259211 11.04666667 0.27 0.426666667 1.222088111 50 31.640625 0 0 0 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 17859909 17859915 + 2R_17859909_17859915_+ 0.801970189 0.801970164 0.801970176 0 olf186-F FBtr0086795|FBtr0086795|FBtr0086795|FBtr0086797|FBtr0086797|FBtr0086797|FBtr0336699|FBtr0336699|FBtr0336699|FBtr0114614|FBtr0114614|FBtr0114614|FBtr0336698|FBtr0336698|FBtr0336698 17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793 17860582|17860582|17860582|17860582|17860582|17860582|17860582|17860582|17860582|17860284|17860284|17860284|17860582|17860582|17860582 2R + 17859883 17859939 3'utr olf186-F FlyBase G17044.1 ATTGTAAATTTGTAGTTGATTAAAATTGTGATACGCGGAATTCAGTAGATTTCTACT 413 17859908 0.719855606 17 384 3002 0.940357853 1.352641846 0.355864811 0.181598063 0.328031809 413 10 20 473 2R:17859883-17859939 7 olf186-F FBtr0336698|FBtr0336698|FBtr0336698|FBtr0114614|FBtr0114614|FBtr0114614|FBtr0336699|FBtr0336699|FBtr0336699|FBtr0086797|FBtr0086797|FBtr0086797|FBtr0086795|FBtr0086795|FBtr0086795 17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793 17860582|17860582|17860582|17860284|17860284|17860284|17860582|17860582|17860582|17860582|17860582|17860582|17860582|17860582|17860582 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 17859885 17859940 3'utr olf186-F FlyBase G12974.2 TGTAAATTTGTAGTTGATTAAAATTGTGATACGCGGAATTCAGTAGATTTCTACTA 288 17859908 0.72611939 12 258 2037 0.90521327 1.303309762 0.362559242 0.374125874 0.575829384 286 22 18 382 2R:17859885-17859940 7 338 1322 FBgn0041585 1045.89 35.90333333 55.08666667 0.323169741 9.414167672 6.135786034 1 1 1 0.1 dme-miR-283-5p 6mer3-8 TGATAT 2R 17860314 17860319 + 2R_17860314_17860319_+ 1 1 1 0 olf186-F FBtr0086795|FBtr0086797|FBtr0336699|FBtr0336698 17859793|17859793|17859793|17859793 17860582|17860582|17860582|17860582 2R + 17860289 17860329 3'utr olf186-F FlyBase G17046.1 GGTGTTGGAGTTTTATTTTTAATCGTGATATATAGCTGAAC 8 17860310 0.981825556 5 8 83 1 0.954242509 0.222222222 0.125 0.222222222 8 0 0 9 2R:17860289-17860329 6 olf186-F FBtr0336698|FBtr0336699|FBtr0086797|FBtr0086795 17859793|17859793|17859793|17859793 17860582|17860582|17860582|17860582 TGATAT 6mer3-8 dme-miR-283-5p 2R + 17860300 17860329 3'utr olf186-F FlyBase G12977.1 TTTATTTTTAATCGTGATATATAGCTGAAC 13 17860307 0.57907223 5 13 125 1 1.230448921 0.411764706 0.230769231 0.411764706 13 0 0 17 2R:17860300-17860329 6 10.5 1323 FBgn0041585 1045.89 35.90333333 55.08666667 0.010039297 0.292451954 0.190608738 4 7 5.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 2R 17867199 17867204 - 2R_17867199_17867204_- 1 0.999999863 0.999999931 7.07E-08 Mapmodulin FBtr0086822|FBtr0300410|FBtr0086823|FBtr0113091 17866176|17866317|17866317|17867036 17867209|17867209|17867209|17867209 2R - 17867172 17867226 stop_codon Mapmodulin FlyBase G24543.1 GAAAGCATGATGGTTAAAACCCTGATCTGTCGGTATAGCGTCTTTGTACGTTATA 23 17867204 0.714524877 7 22 170 0.966666667 1.161368002 0.133333333 0.260869565 0.433333333 23 0 1 29 2R:17867172-17867226 6 Mapmodulin FBtr0300410|FBtr0086822|FBtr0086823 17866317|17866176|17866317 17867209|17867209|17867209 TGATCT 6mer3-8 dme-bantam-3p 2R - 17867151 17867219 stop_codon Mapmodulin FlyBase G18567.1 TGATGGTTAAAACCCTGATCTGTCGGTATAGCGTCTTTGTACGTTATAAATTTAAATATACACCCACAC 7 17867204 0.980005899 5 7 53 1 1 0 0.428571429 0.6 7 0 0 10 2R:17867151-17867219 6 14.5 1324 FBgn0034282 4492.536667 281.28 432.79 0.003227575 0.051550057 0.033503547 0 0 0 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2R 18100562 18100567 + 2R_18100562_18100567_+ 0.999958236 0.999996508 0.999977372 2.71E-05 CG5098 FBtr0329994|FBtr0346952|FBtr0113092|FBtr0086732 18100252|18100207|18100207|18100207 18101031|18101031|18101031|18101031 2R + 18100531 18100626 3'utr CG5098 FlyBase G17062.1 ATTTTTTCGCATAGTCCAGAACTTTACATTAGTACCTTTTAGTTCTAACTAATTTTAAAACCACCAGCCCATGTCCTATGCCCACCCATCTGCATC 76 18100569 0.864456841 14 75 707 0.989010989 1.954242509 0.142857143 0.157894737 0.296703297 76 1 0 90 2R:18100531-18100626 6 CG5098 FBtr0113092|FBtr0086732|FBtr0329994|FBtr0346952 18100207|18100207|18100252|18100207 18101031|18101031|18101031|18101031 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2R + 18100504 18100620 3'utr CG5098 FlyBase G12992.1 GTTTATGTTTAAGATACGTCCTAAATTATTTTTTCGCATAGTCCAGAACTTTACATTAGTACCTTTTAGTTCTAACTAATTTTAAAACCACCAGCCCATGTCCTATGCCCACCCATC 62 18100569 0.989677844 12 60 590 0.957446809 1.954242509 0.117021277 0.322580645 0.553191489 62 4 0 90 2R:18100504-18100620 6 52.5 1325 FBgn0034300 227 5.456666667 8.356666667 0.231277533 9.6212584 6.282409254 -7 -7 -7 0.1 dme-miR-8-3p 8mer-A1 CAGTATTA 2R 18118379 18118386 - 2R_18118379_18118386_- 0.648099282 0.646759588 0.647429435 0.000947311 stau FBtr0086783|FBtr0086784 18117894|18117894 18119780|18119780 2R - 18118351 18118425 3'utr stau FlyBase G24567.2 AGCCCCAGCGAACTGTAACCGTTGAAATGAAGTCAATCCCAGTATTAAATGTATAGATAGGGGGCAGTTGTGCGT 19 18118389 0.974347486 7 15 114 0.875 1.322219295 0.125 0.263157895 0.416666667 19 3 0 21 2R:18118351-18118425 8 stau FBtr0086784|FBtr0086783 18117894|18117894 18119780|18119780 CAGTATTA 8mer-A1 dme-miR-8-3p 2R - 18118359 18118426 3'utr stau FlyBase G18586.1 AAGCCCCAGCGAACTGTAACCGTTGAAATGAAGTCAATCCCAGTATTAAATGTATAGATAGGGGGCAG 9 18118389 0.968322356 6 8 43 1 1.322219295 0.142857143 0.666666667 0.857142857 9 0 0 21 2R:18118359-18118426 8 9 1326 FBgn0003520 789.19 18.35 28.11 0.011404098 0.490463215 0.320170758 3 3 3 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA 2R 18119051 18119056 - 2R_18119051_18119056_- 0.883122531 1 0.941561266 0.082644873 stau FBtr0086783|FBtr0086784 18117894|18117894 18119780|18119780 2R - 18119024 18119089 3'utr stau FlyBase G24571.1 ACGACAACCATGAACCGTTTGTGGTCATATGCTTGATGAAACTCGTCGAATAATGAATCTATTATA 16 18119036 0.985857462 8 15 124 0.9375 0.875061263 0.1875 0 0 16 0 1 15 2R:18119024-18119089 6 stau FBtr0086784|FBtr0086783 18117894|18117894 18119780|18119780 TGATGA 6mer3-8 dme-miR-2a-2-5p 2R - 18119003 18119094 3'utr stau FlyBase G18587.1 AAAGCACGACAACCATGAACCGTTTGTGGTCATATGCTTGATGAAACTCGTCGAATAATGAATCTATTATACGTATACTATATTTAAGTGTT 17 18119037 0.978625422 11 17 120 1 1.380211242 0 0.294117647 0.5 17 0 0 24 2R:18119003-18119094 6 8.5 1327 FBgn0003520 789.19 18.35 28.11 0.010770537 0.463215259 0.302383493 -20 -19 -19.5 0.1 dme-miR-932-5p 7mer-A1 GAATTGA 2R 18119471 18119477 - 2R_18119471_18119477_- 0.823226759 0.82334117 0.823283965 8.09E-05 stau FBtr0086783|FBtr0086784 18117894|18117894 18119780|18119780 2R - 18119419 18119480 3'utr stau FlyBase G24574.1 TGAGAATTGAATAACGAATCGAACTGATAGTAACCGAAACTGAACAGAGGCGAACACTTAAC 14 18119453 0.939947215 5 14 54 1 1.255272505 0.166666667 0.285714286 0.444444444 14 0 0 18 2R:18119419-18119480 7 stau FBtr0086784|FBtr0086783 18117894|18117894 18119780|18119780 GAATTGA 7mer-A1 dme-miR-932-5p 2R - 18119421 18119479 3'utr stau FlyBase G18591.1 GAGAATTGAATAACGAATCGAACTGATAGTAACCGAAACTGAACAGAGGCGAACACTTA 17 18119452 0.955733922 7 15 67 0.913043478 1.322219295 0.47826087 0.294117647 0.47826087 17 2 0 21 2R:18119421-18119479 7 8.5 1328 FBgn0003520 789.19 18.35 28.11 0.010770537 0.463215259 0.302383493 -24 -25 -24.5 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA 2R 18119508 18119513 - 2R_18119508_18119513_- 0.657380574 0.876891575 0.767136074 0.155217717 stau FBtr0086783|FBtr0086784 18117894|18117894 18119780|18119780 2R - 18119486 18119531 3'utr stau FlyBase G24575.1 TATTTATGTGTGCACGTTGTGCAAACTGGTGTTATTATTTTATTTA 10 18119505 0.834196479 7 10 109 1 1.041392685 0.363636364 0.1 0.181818182 10 0 0 11 2R:18119486-18119531 6 stau FBtr0086784|FBtr0086783 18117894|18117894 18119780|18119780 GTGCAA 6mer3-8 dme-miR-92b-3p 2R - 18119493 18119518 3'utr stau FlyBase G18592.1 ACGTTGTGCAAACTGGTGTTATTATT 5 18119497 0.686507538 4 5 36 1 1.113943352 0.538461538 0.8 0.923076923 5 0 0 13 2R:18119493-18119518 6 7.5 1329 FBgn0003520 789.19 18.35 28.11 0.009503415 0.408719346 0.266808965 -8 -16 -12 0.1 dme-miR-92b-3p 7mer-m1 TGCAATT 2R 18119736 18119742 - 2R_18119736_18119742_- 0.765575171 0.76558664 0.765580905 8.06E-06 stau FBtr0086783|FBtr0086784 18117894|18117894 18119780|18119780 2R - 18119710 18119794 stop_codon stau FlyBase G24578.1 ATGCCATGAAATAAGCATAAAGCGCTGAAAATTTCACAAAACCCTTATTAACTGCAATTTTTGTTGTTGCACATAAGCATGATAA 28 18119744 0.989184775 12 23 213 0.833333333 1.176091259 0.027777778 0.214285714 0.388888889 28 5 1 30 2R:18119710-18119794 7 stau FBtr0086784|FBtr0301614|FBtr0086783 18117894|18119622|18117894 18119780|18119780|18119780 TGCAATT 7mer-m1 dme-miR-92b-3p 2R - 18119711 18119775 3'utr stau FlyBase G18594.1 AAGCGCTGAAAATTTCACAAAACCCTTATTAACTGCAATTTTTGTTGTTGCACATAAGCATGATA 23 18119741 0.993817712 7 15 187 0.675 1.431363764 0.075 0.434782609 0.675 23 13 0 27 2R:18119711-18119775 7 19 1330 FBgn0003520 789.19 18.35 28.11 0.024075318 1.035422343 0.675916044 2 -1 0.5 0.1 dme-miR-283-5p 6mer3-8 TGATAT 2R 18130559 18130564 - 2R_18130559_18130564_- 0.996729908 0.995352366 0.996041137 0.00097404 Hsf FBtr0086782|FBtr0110965|FBtr0110966|FBtr0110964 18130301|18130301|18130301|18130301 18130754|18130754|18130754|18130754 2R - 18130501 18130612 3'utr Hsf FlyBase G24589.1 CACTATAATCATATGAATGATCTGTATATGCCTTATGCACTATATATATGATATATAGACTAACCAGTTCTTGTTGTAGAAAGACTCGAAGAATCAGTAAAGATTTAGATTT 49 18130557 0.98706046 10 46 403 0.945454545 1.716003344 0.018181818 0.081632653 0.181818182 49 3 0 52 2R:18130501-18130612 6 Hsf FBtr0110966|FBtr0110964|FBtr0086782|FBtr0110965 18130301|18130301|18130301|18130301 18130754|18130754|18130754|18130754 TGATAT 6mer3-8 dme-miR-283-5p 2R - 18130519 18130639 3'utr Hsf FlyBase G18603.1 GATTCATACGATAATCACATTAATAACCACTATAATCATATGAATGATCTGTATATGCCTTATGCACTATATATATGATATATAGACTAACCAGTTCTTGTTGTAGAAAGACTCGAAGAAT 35 18130557 0.985614319 12 34 282 0.976190476 1.311753861 0.071428571 0.2 0.333333333 35 0 1 41 2R:18130519-18130639 6 17.5 1331 FBgn0001222 975.6666667 42.15 64.28666667 0.017936454 0.415183867 0.272218189 -7 -7 -7 0.1 dme-bantam-3p 6mer3-8 TGATCT 2R 18130590 18130595 - 2R_18130590_18130595_- 0.999795954 0.996648572 0.998222263 0.002225548 Hsf FBtr0086782|FBtr0110965|FBtr0110966|FBtr0110964 18130301|18130301|18130301|18130301 18130754|18130754|18130754|18130754 2R - 18130501 18130612 3'utr Hsf FlyBase G24589.1 CACTATAATCATATGAATGATCTGTATATGCCTTATGCACTATATATATGATATATAGACTAACCAGTTCTTGTTGTAGAAAGACTCGAAGAATCAGTAAAGATTTAGATTT 49 18130595 0.98706046 10 46 403 0.945454545 1.716003344 0.018181818 0.081632653 0.181818182 49 3 0 52 2R:18130501-18130612 6 Hsf FBtr0110966|FBtr0110964|FBtr0086782|FBtr0110965 18130301|18130301|18130301|18130301 18130754|18130754|18130754|18130754 TGATCT 6mer3-8 dme-bantam-3p 2R - 18130519 18130639 3'utr Hsf FlyBase G18603.1 GATTCATACGATAATCACATTAATAACCACTATAATCATATGAATGATCTGTATATGCCTTATGCACTATATATATGATATATAGACTAACCAGTTCTTGTTGTAGAAAGACTCGAAGAAT 35 18130595 0.985614319 12 34 282 0.976190476 1.311753861 0.071428571 0.2 0.333333333 35 0 1 41 2R:18130519-18130639 6 20.5 1332 FBgn0001222 975.6666667 42.15 64.28666667 0.021011274 0.486358244 0.318884165 0 0 0 0.1 dme-miR-980-5p 6mer3-8 GAAAAA 2R 18139387 18139392 + 2R_18139387_18139392_+ 0.999708917 0.999660332 0.999684624 3.44E-05 Pcl FBtr0086735|FBtr0329998 18139235|18139235 18139442|18139990 2R + 18139345 18139432 3'utr Pcl FlyBase G17085.1 TGTTAATGTTTAAAAGTTTATTACCAACCCACTGCCAAAATAGAAAAAGATTGTTCAAAATATTGGTTCAGCATTAAAGCGATAAAAT 19 18139395 0.961262431 6 19 98 1 1.342422681 0.136363636 0.157894737 0.272727273 19 0 0 22 2R:18139345-18139432 6 Pcl FBtr0086735|FBtr0329998 18139235|18139235 18139442|18139990 GAAAAA 6mer3-8 dme-miR-980-5p 2R + 18139357 18139428 3'utr Pcl FlyBase G13008.1 AAAGTTTATTACCAACCCACTGCCAAAATAGAAAAAGATTGTTCAAAATATTGGTTCAGCATTAAAGCGATA 13 18139395 0.800346722 7 13 70 1 1.176091259 0.066666667 0.153846154 0.266666667 13 0 0 15 2R:18139357-18139428 6 11.5 1333 FBgn0003044 1047.913333 31.18 47.85 0.01097419 0.368826171 0.240334378 -8 -8 -8 0.1 dme-miR-988-3p 7mer-A1 CAAGGGA 2R 18146837 18146843 + 2R_18146837_18146843_+ 0.782911223 0.782911821 0.782911522 4.24E-07 pAbp FBtr0086740 18145219 18147191 2R + 18146675 18146952 3'utr pAbp FlyBase G17106.1 AAACAAATAAAAACCCAAGGAAAAATCATTGAAAAAATTGCAAAACACAAAACCACATGTATGCAGAAAATGCAAAATTATTTAAAAAAAACAAACAAACAAAATAATGAGAGTAAAACAGAAAAAAAAAACATAACCAAAACCCGAATTGGAATGTTAGTTCAAGGGAAATTGCGAAGAAGAAAACTTTTACTTTTCACGAAATATACGCAAGTCAACACACTTCTATATATAGCAGATATATATATGTATCCTTATATATTAAAGCGAAATAAAAC 86 18146835 0.972309948 27 79 454 0.93814433 1.356981401 0.092783505 0.127906977 0.226804124 86 3 3 91 2R:18146675-18146952 7 pAbp FBtr0086740 18145219 18147191 CAAGGGA 7mer-A1 dme-miR-988-3p 2R + 18146661 18146858 3'utr pAbp FlyBase G13033.1 AAATCGAAAACTAAAAACAAATAAAAACCCAAGGAAAAATCATTGAAAAAATTGCAAAACACAAAACCACATGTATGCAGAAAATGCAAAATTATTTAAAAAAAACAAACAAACAAAATAATGAGAGTAAAACAGAAAAAAAAAACATAACCAAAACCCGAATTGGAATGTTAGTTCAAGGGAAATTGCGAAGAAGAA 40 18146834 0.952382821 16 37 162 0.940298507 1.498310554 0.23880597 0.5 0.701492537 40 3 1 63 2R:18146661-18146858 7 21 1334 FBgn0265297 43597.22333 1372.25 2113.58 0.000481682 0.015303334 0.009935749 2 3 2.5 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 2R 18147416 18147422 - 2R_18147416_18147422_- 0.604269144 0.487252033 0.545760588 0.082743585 CG17680 FBtr0086781 18147295 18147588 2R - 18147279 18147440 3'utr CG17680 FlyBase G24602.1 AAGAATCCGCGCAGCTCTTGCATTTTTTGTGTATTGTCGTGTATTCTTCAAGTCCCGCTTTGATATTTTCGCTTTCTGAATGTTAACTATGCTCGTTAAATACTTGAATGTACTAGAATTAAATAAAGTTTATTCGACTATGCTTAAAACCTGTCTGTTATT 49 18147423 0.987563768 18 46 411 0.950819672 1.286306739 0.31147541 0.183673469 0.344262295 49 1 2 58 2R:18147279-18147440 7 CG17680 FBtr0086781 18147295 18147588 TGCATTT 7mer-m8 dme-miR-277-3p 2R - 18147316 18147438 3'utr CG17680 FlyBase G18613.1 GAATCCGCGCAGCTCTTGCATTTTTTGTGTATTGTCGTGTATTCTTCAAGTCCCGCTTTGATATTTTCGCTTTCTGAATGTTAACTATGCTCGTTAAATACTTGAATGTACTAGAATTAAATA 25 18147423 0.988304384 10 24 221 0.967741935 1.176091259 0.548387097 0.2 0.35483871 25 0 1 30 2R:18147316-18147438 7 13 1335 FBgn0062440 137 25.31333333 38.62666667 0.094890511 0.513563339 0.336555057 1 1 1 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 2R 18147544 18147549 - 2R_18147544_18147549_- 0.999981732 0.999994952 0.999988342 9.40E-06 CG17680 FBtr0086781 18147295 18147588 2R - 18147527 18147597 stop_codon CG17680 FlyBase G24604.1 GAGGATTAAGCATCCGGACACTTGACAATCTCCATGTGGGAGTGCCTCCTAGTCGGGATAAATGTGTTGGC 26 18147553 0.934363125 6 22 138 0.821428571 1.06069784 0.464285714 0.076923077 0.142857143 26 4 1 23 2R:18147527-18147597 6 CG17680 FBtr0086781 18147295 18147588 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 2R - 18147527 18147571 3'utr CG17680 FlyBase G18615.1 AATCTCCATGTGGGAGTGCCTCCTAGTCGGGATAAATGTGTTGGC 18 18147552 0.730883113 6 17 102 0.96969697 1.505149978 0.515151515 0.611111111 0.787878788 18 1 0 32 2R:18147527-18147571 6 17.5 1336 FBgn0062440 137 25.31333333 38.62666667 0.127737226 0.691335265 0.453054884 4 3 3.5 0.1 dme-miR-308-3p 8mer-m1 CTGTGATT 2R 18148475 18148482 - 2R_18148475_18148482_- 0.275293867 0.308100421 0.291697144 0.023197699 CG5742 FBtr0329999|FBtr0086780|FBtr0330000 18148094|18148462|18148462 18149675|18149675|18149549 2R - 18148463 18148505 3'utr CG5742 FlyBase G24606.1 TAGTTTCGGTTCGCATTGCTTTGCTGTGATTTTGCCCTCTTTA 33 18148484 0.729570457 4 32 380 0.973684211 1.568201724 0.263157895 0.151515152 0.263157895 33 1 0 37 2R:18148463-18148505 8 CG5742 FBtr0330000|FBtr0329999|FBtr0086780 18148462|18148094|18148462 18149549|18149675|18149675 CTGTGATT 8mer-m1 dme-miR-308-3p 2R - 18148465 18148504 3'utr CG5742 FlyBase G18616.1 AGTTTCGGTTCGCATTGCTTTGCTGTGATTTTGCCCTCTT 27 18148484 0.681693238 5 26 322 0.976744186 1.322219295 0.162790698 0.481481481 0.674418605 27 0 1 42 2R:18148465-18148504 8 30 1337 FBgn0034304 304 12.44333333 19.22666667 0.098684211 2.410929547 1.560332871 2 2 2 0.1 dme-miR-1003-3p 7mer-m8 ATGTGAG 2R 18154173 18154179 - 2R_18154173_18154179_- 0.671796207 0.671796207 0.671796207 0 lolal FBtr0086777 18154093 18155147 2R - 18154141 18154197 3'utr lolal FlyBase G24616.1 ATGTATGTATATGTATACATGTGAGCATAGATTTAAAGAAACTACGGTAAATAAACA 27 18154170 0.988774769 7 22 204 0.766666667 1.06069784 0.133333333 0.074074074 0.166666667 27 6 1 23 2R:18154141-18154197 7 lolal FBtr0086777 18154093 18155147 ATGTGAG 7mer-m8 dme-miR-1003-3p 2R - 18154134 18154197 3'utr lolal FlyBase G18621.1 ATGTATGTATATGTATACATGTGAGCATAGATTTAAAGAAACTACGGTAAATAAACAGAATAAT 21 18154182 0.987268663 8 17 145 0.810810811 1.477121255 0.162162162 0.476190476 0.702702703 21 7 0 30 2R:18154134-18154197 7 23.5 1338 FBgn0022238 614.5133333 54.55666667 83.64333333 0.038241644 0.430744791 0.280954848 -9 3 -3 0.1 dme-miR-283-5p 6mer2-7 GATATT 2R 18163556 18163561 + 2R_18163556_18163561_+ 0.998422112 0.999999336 0.999210724 0.001115249 CG10915 FBtr0345416|FBtr0086746 18163524|18163524 18164746|18164209 2R + 18163498 18163594 stop_codon CG10915 FlyBase G17120.1 GGCCGCGGGCACGGCGAAGCAGAATTAGACACCTACACTCAGACTTACATTAATAACCGATATTGGGCGTAGCGATAAGCGAAATACTCAAGCGGCG 13 18163559 0.96539504 8 11 54 0.8125 0.636822098 0.3125 0.230769231 0.375 13 1 2 13 2R:18163498-18163594 6 CG10915 FBtr0086746|FBtr0345416 18163524|18163524 18164209|18164746 GATATT 6mer2-7 dme-miR-283-5p 2R + 18163496 18163559 stop_codon CG10915 FlyBase G13042.1 ACGGCCGCGGGCACGGCGAAGCAGAATTAGACACCTACACTCAGACTTACATTAATAACCGATA 7 18163537 0.960910555 5 6 28 1 1 0.1 0.285714286 0.5 7 0 0 10 2R:18163496-18163559 4 4 1339 FBgn0034308 795.0233333 28.65333333 43.94333333 0.005031299 0.139599814 0.091026322 -3 19 8 0.1 dme-miR-305-5p 6mer2-7 GTACAA 2R 18164138 18164143 + 2R_18164138_18164143_+ 0.99942445 0.976370067 0.987897258 0.016301923 CG10915 FBtr0345416|FBtr0086746 18163524|18163524 18164746|18164209 2R + 18164083 18164191 3'utr CG10915 FlyBase G17122.1 AAGCCAAGAGACAAGCGACTTTAAATGTAATTCCGTACGTAGTAACCGAACATTTGTACAAGGCCGTGCGATTCTCATAACAAGTAACAGCCACAATATATGATAATTA 93 18164136 0.955038233 13 88 400 0.957264957 1.572096768 0.299145299 0.225806452 0.384615385 93 3 2 112 2R:18164083-18164191 6 CG10915 FBtr0086746|FBtr0345416 18163524|18163524 18164209|18164746 GTACAA 6mer2-7 dme-miR-305-5p 2R + 18164083 18164175 3'utr CG10915 FlyBase G13044.1 AAGCCAAGAGACAAGCGACTTTAAATGTAATTCCGTACGTAGTAACCGAACATTTGTACAAGGCCGTGCGATTCTCATAACAAGTAACAGCCA 81 18164136 0.955813876 12 79 367 0.982142857 2.041392685 0.303571429 0.283950617 0.482142857 81 2 0 110 2R:18164083-18164175 6 58 1340 FBgn0034308 795.0233333 28.65333333 43.94333333 0.072953834 2.024197301 1.319881666 2 2 2 0.1 dme-miR-980-3p 7mer-A1 GCAGCTA 2R 18164340 18164346 + 2R_18164340_18164346_+ 0.809662146 0.8049152 0.807288673 0.003356565 CG10915 FBtr0345416 18163524 18164746 2R + 18164292 18164421 3'utr CG10915 FlyBase G17123.2 ATAGTTCTTAGGTGCGTCGCATACGTGTGTAATCAACTTCCTCCATGTGCAGCTAACATACTGAATTATTTCGTAGTGTTTGATTTATATATTAAGTTCTAAGTTCGGCCTAAGCACCTTTGTTTGCCCG 136 18164337 0.981511724 18 129 890 0.958333333 1.90579588 0.035714286 0.183823529 0.339285714 136 6 1 161 2R:18164292-18164421 7 CG10915 FBtr0345416 18163524 18164746 GCAGCTA 7mer-A1 dme-miR-980-3p 2R + 18164289 18164389 3'utr CG10915 FlyBase G13045.2 TTAATAGTTCTTAGGTGCGTCGCATACGTGTGTAATCAACTTCCTCCATGTGCAGCTAACATACTGAATTATTTCGTAGTGTTTGATTTATATATTAAGTT 81 18164337 0.796114938 13 79 504 1 2.096910013 0.04 0.419753086 0.624 81 0 0 125 2R:18164289-18164389 7 91.5 1341 FBgn0034308 795.0233333 28.65333333 43.94333333 0.115090962 3.193345742 2.082227111 3 3 3 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 18164534 18164539 + 2R_18164534_18164539_+ 0.999686202 0.94454391 0.972115056 0.038991494 CG10915 FBtr0345416|FBtr0345416|FBtr0345416 18163524|18163524|18163524 18164746|18164746|18164746 2R + 18164518 18164626 3'utr CG10915 FlyBase G17124.1 ATTTTACAAATGCGTACTGTGAACATCCCTCCAGCCCCCCAGCAGCTTGGATTACCTTTTTAGTCAAAGGGCAGCAGCCAGTCAAGTAGTGTTGTTGGTACAATAAATA 48 18164543 0.764014351 14 43 293 0.877192982 1.096910013 0.333333333 0.125 0.263157895 48 4 3 50 2R:18164518-18164626 6 CG10915 FBtr0345416|FBtr0345416|FBtr0345416 18163524|18163524|18163524 18164746|18164746|18164746 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 18164518 18164619 3'utr CG10915 FlyBase G13047.1 ATTTTACAAATGCGTACTGTGAACATCCCTCCAGCCCCCCAGCAGCTTGGATTACCTTTTTAGTCAAAGGGCAGCAGCCAGTCAAGTAGTGTTGTTGGTACA 29 18164536 0.686504114 12 26 154 0.87755102 1.633468456 0.204081633 0.413793103 0.653061224 29 6 0 43 2R:18164518-18164619 6 14.5 1342 FBgn0034308 795.0233333 28.65333333 43.94333333 0.018238458 0.506049325 0.329970416 -9 -2 -5.5 0.1 dme-miR-33-5p 8mer-A1 CAATGCAA 2R 18164679 18164686 + 2R_18164679_18164686_+ 0.634552243 0.634320742 0.634436492 0.000163695 CG10915 FBtr0345416 18163524 18164746 2R + 18164643 18164698 3'utr CG10915 FlyBase G17125.1 AAGATATAAACAAAATGCGTATGAATAACAAGTTAGCAATGCAAGCGCGATCTATA 12 18164675 0.967743315 6 11 53 0.933333333 1.146128036 0.466666667 0.166666667 0.333333333 12 1 0 14 2R:18164643-18164698 8 CG10915 FBtr0345416 18163524 18164746 CAATGCAA 8mer-A1 dme-miR-33-5p 2R + 18164650 18164696 3'utr CG10915 FlyBase G13048.1 AAACAAAATGCGTATGAATAACAAGTTAGCAATGCAAGCGCGATCTA 6 18164675 0.952376707 2 4 25 1 0.77815125 0.166666667 0 0 6 0 0 6 2R:18164650-18164696 8 8 1343 FBgn0034308 795.0233333 28.65333333 43.94333333 0.010062598 0.279199628 0.182052644 4 4 4 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2R 18168991 18168996 - 2R_18168991_18168996_- 0.999997448 0.999999989 0.999998719 1.84E-06 Dgp-1 FBtr0086773|FBtr0086774 18168741|18168411 18169024|18169024 2R - 18168966 18169077 stop_codon Dgp-1 FlyBase G24640.1 ATCCTTCGTCGTCGTCCTCGGTTGAAGTCACACCGGCCGCTCTCACCGAGTGAAGTGCGCCGCCTGCATGTTTTGGCTCTTTCTAGTTTTGTAAACTAAAGTATTTTTTTTT 29 18168997 0.900177205 17 27 278 0.911764706 1.491361694 0.147058824 0.103448276 0.235294118 29 3 0 31 2R:18168966-18169077 6 Dgp-1 FBtr0086774|FBtr0086773 18168411|18168741 18169024|18169024 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2R - 18168973 18169107 stop_codon Dgp-1 FlyBase G18637.1 CGGCCTCTTTGGGTCTGCCCCTCGGCGAGAATCCTTCGTCGTCGTCCTCGGTTGAAGTCACACCGGCCGCTCTCACCGAGTGAAGTGCGCCGCCTGCATGTTTTGGCTCTTTCTAGTTTTGTAAACTAAAGTATT 32 18168997 0.949764327 12 32 262 1 1.707570176 0.117647059 0.5 0.68627451 32 0 0 51 2R:18168973-18169107 6 15.5 1344 FBgn0027836 713.1466667 32.87333333 49.73 0.02173466 0.471506794 0.311683089 1 1 1 0.1 dme-miR-1003-3p 6mer2-7 TGTGAG 2R 18175472 18175477 - 2R_18175472_18175477_- 0.999998773 0.999998999 0.999998886 1.41E-07 CG5726 FBtr0086772 18175253 18176079 2R - 18175426 18175498 3'utr CG5726 FlyBase G24656.1 ACGTATTTTTAAAGCAAATTTTGTGAGGCCCTCTGTTGGAACAACAAAGCCAAGCCGGAGTGCAGAGAAAAAC 66 18175478 0.973020183 7 62 449 0.931506849 1.355387658 0.054794521 0.106060606 0.191780822 66 3 2 68 2R:18175426-18175498 6 CG5726 FBtr0086772 18175253 18176079 TGTGAG 6mer2-7 dme-miR-1003-3p 2R - 18175454 18175498 3'utr CG5726 FlyBase G18656.1 ACGTATTTTTAAAGCAAATTTTGTGAGGCCCTCTGTTGGAACAAC 34 18175478 0.680497868 5 32 255 0.9375 1.352182518 0 0.323529412 0.520833333 34 2 1 45 2R:18175454-18175498 6 48 1345 FBgn0034313 580.9266667 20.17 30.98666667 0.082626608 2.379771939 1.549053356 1 1 1 0.1 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 18175678 18175685 - 2R_18175678_18175685_- 0.602731416 0.605654138 0.604192777 0.002066661 CG5726 FBtr0086772 18175253 18176079 2R - 18175666 18175697 3'utr CG5726 FlyBase G24658.1 GCTTAGAAACTAAGTACAAAGTCAATGAAAAA 5 18175672 0.866793604 4 5 18 1 0.903089987 0.375 0.6 0.75 5 0 0 8 2R:18175666-18175697 8 CG5726 FBtr0086772 18175253 18176079 AGTACAAA 8mer-A1 dme-miR-305-5p 2R - 18175658 18175701 3'utr CG5726 FlyBase G18657.1 AATTGCTTAGAAACTAAGTACAAAGTCAATGAAAAAACAAAAAT 6 18175696 0.977280583 4 5 25 0.857142857 0.77815125 0 0.166666667 0.285714286 6 1 0 6 2R:18175658-18175701 8 5 1346 FBgn0034313 580.9266667 20.17 30.98666667 0.008606938 0.24789291 0.161359725 -13 11 -1 0.1 dme-miR-14-3p 6mer2-7 AGACTG 2R 18175961 18175966 - 2R_18175961_18175966_- 0.999891707 0.999998798 0.999945252 7.57E-05 CG5726 FBtr0086772 18175253 18176079 2R - 18175923 18176012 3'utr CG5726 FlyBase G24660.1 TGTTTCGCCTTCGTATATGTTTCCTAATGGATGTGTATATCCACGTAGACTGTTTTCACATTATTTTGTCTTCAACTGAGCTCAAATGTT 39 18175960 0.799523655 10 36 349 0.957446809 1.352182518 0.255319149 0.179487179 0.319148936 39 1 1 45 2R:18175923-18176012 6 CG5726 FBtr0086772 18175253 18176079 AGACTG 6mer2-7 dme-miR-14-3p 2R - 18175923 18175978 3'utr CG5726 FlyBase G18658.1 GTATATCCACGTAGACTGTTTTCACATTATTTTGTCTTCAACTGAGCTCAAATGTT 16 18175960 0.9852749 5 14 123 0.913043478 1.021189299 0.347826087 0.25 0.47826087 16 1 1 21 2R:18175923-18175978 6 16.5 1347 FBgn0034313 580.9266667 20.17 30.98666667 0.028402897 0.818046604 0.532487091 -6 -6 -6 0.1 dme-miR-1007-3p 7mer-m8 TGAGCTT 2R 18275681 18275687 - 2R_18275681_18275687_- 0.620202895 0.62019317 0.620198033 6.86E-06 Ote FBtr0086768 18275605 18275804 2R - 18275637 18275700 3'utr Ote FlyBase G24678.1 TTTTGATGTAACTTGAGCTTGAGTTTGACTAGCATTTAAGCTGCGTGTTATCCGTGTTCAAATA 28 18275687 0.807666015 6 27 226 1 1.568201724 0.594594595 0.25 0.432432432 28 0 0 37 2R:18275637-18275700 7 Ote FBtr0086768 18275605 18275804 TGAGCTT 7mer-m8 dme-miR-1007-3p 2R - 18275638 18275714 3'utr Ote FlyBase G18673.1 TTGTATGAATCTTGTTTTGATGTAACTTGAGCTTGAGTTTGACTAGCATTTAAGCTGCGTGTTATCCGTGTTCAAAT 18 18275687 0.986411498 5 18 156 1 1.431363764 0.481481481 0.388888889 0.592592593 18 0 0 27 2R:18275638-18275714 7 18 1348 FBgn0266420 914.6666667 70.74 107.93 0.0196793 0.254452926 0.166774761 0 0 0 0.1 dme-miR-92b-3p 7mer-m1 TGCAATT 2R 18278583 18278589 - 2R_18278583_18278589_- 0.576752717 0.691520958 0.634136837 0.081153443 sbb FBtr0301550 18278196 18280102 2R - 18278576 18278609 3'utr sbb FlyBase G24684.1 AGGTTTTTTGACATTCTTAATGCAATTTGTAATC 14 18278593 0.757025235 3 14 139 1 1.204119983 0 0.142857143 0.25 14 0 0 16 2R:18278576-18278609 7 sbb FBtr0301550 18278196 18280102 TGCAATT 7mer-m1 dme-miR-92b-3p 2R - 18278576 18278619 3'utr sbb FlyBase G18674.1 AGGAGTCGCTAGGTTTTTTGACATTCTTAATGCAATTTGTAATC 13 18278593 0.987181019 5 12 115 1 1.342422681 0.090909091 0.538461538 0.727272727 13 0 0 22 2R:18278576-18278619 7 13 1349 FBgn0010575 986.7266667 17.07666667 26.24333333 0.013174875 0.761272692 0.495363902 4 4 4 0.1 dme-miR-968-5p 6mer3-8 ACTACT 2R 18279254 18279259 - 2R_18279254_18279259_- 0.992353897 0.994464282 0.99340909 0.001492278 sbb FBtr0301550|FBtr0329997|FBtr0301551|FBtr0301547 18278196|18279063|18279063|18278978 18280102|18280048|18280102|18280102 2R - 18279226 18279288 3'utr sbb FlyBase G24687.1 TGTGTATCTAAATCTATATCTGTGTGTGTACTACTCGTATCCGTAGTTTCTACTTTATAAGTT 75 18279262 0.916808826 6 71 772 0.942528736 1.612783857 0.114942529 0.12 0.24137931 75 4 1 82 2R:18279226-18279288 6 sbb FBtr0301551|FBtr0301547|FBtr0301550|FBtr0329997 18279063|18278978|18278196|18279063 18280102|18280102|18280102|18280048 ACTACT 6mer3-8 dme-miR-968-5p 2R - 18279224 18279287 3'utr sbb FlyBase G18677.1 GTGTATCTAAATCTATATCTGTGTGTGTACTACTCGTATCCGTAGTTTCTACTTTATAAGTTCT 47 18279262 0.987684976 6 46 452 0.96875 1.792391689 0.09375 0.255319149 0.453125 47 2 0 62 2R:18279224-18279287 6 57.5 1350 FBgn0010575 986.7266667 17.07666667 26.24333333 0.058273483 3.367167675 2.191032643 3 3 3 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 2R 18279374 18279379 - 2R_18279374_18279379_- 0.999999998 0.999999998 0.999999998 0 sbb FBtr0301550|FBtr0329997|FBtr0301551|FBtr0301547 18278196|18279063|18279063|18278978 18280102|18280048|18280102|18280102 2R - 18279350 18279458 3'utr sbb FlyBase G24688.2 ATTGTTTAACTAAATGATTAAATTATGCAAGTAGAACGTACAAGATTAGCATTTAGCGTGTGTATTAATTATCCTTATCTGTGTTGCGGATGGAGCTGCGCGGGATTTG 233 18279381 0.984492968 21 165 1912 0.701886792 1.667452953 0.230188679 0.124463519 0.230188679 233 76 3 186 2R:18279350-18279458 6 sbb FBtr0301551|FBtr0301547|FBtr0301550|FBtr0329997 18279063|18278978|18278196|18279063 18280102|18280102|18280102|18280048 TGTGTT 6mer3-8 dme-miR-317-3p 2R - 18279301 18279393 3'utr sbb FlyBase G18678.1 TAATTATCCTTATCTGTGTTGCGGATGGAGCTGCGCGGGATTTGCATCTAAAAGACAAATTGGGCGCGCCGCCCATTCAATTCTTATAAATAT 220 18279381 0.885389879 16 135 1533 0.630813953 1.222516382 0.296511628 0.404545455 0.619186047 220 115 12 217 2R:18279301-18279393 6 211.5 1351 FBgn0010575 986.7266667 17.07666667 26.24333333 0.214345074 12.3853211 8.059189635 2 2 2 0.1 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 18409811 18409817 - 2R_18409811_18409817_- 0.823349562 0.823349557 0.82334956 0 imd FBtr0086725|FBtr0345891 18409794|18409794 18410171|18410171 2R - 18409801 18409830 3'utr imd FlyBase G24719.1 TTATACAAATAGAAGCTTTATTGTTACGTA 5 18409821 0.854286714 2 5 41 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2R:18409801-18409830 7 imd FBtr0086725|FBtr0345891 18409794|18409794 18410171|18410171 AGCTTTA 7mer-A1 dme-miR-79-3p 2R - 18409804 18409861 3'utr imd FlyBase G18701.1 GAGCTGGTATTTAAAAGCATTTTTGTAAAGTTTATACAAATAGAAGCTTTATTGTTAC 9 18409813 0.98230543 6 8 67 1 1.176091259 0.6 0.333333333 0.6 9 0 0 15 2R:18409804-18409861 7 6 1352 FBgn0013983 396 36.13 55.28 0.015151515 0.16606698 0.10853835 4 -4 0 0.1 dme-miR-277-3p 6mer3-8 TGCATT 2R 18409929 18409934 - 2R_18409929_18409934_- 0.995675087 0.989813943 0.992744515 0.004144494 imd FBtr0086725|FBtr0345891 18409794|18409794 18410171|18410171 2R - 18409884 18409994 3'utr imd FlyBase G24720.1 ACGGGATATATGTGCAATATTTGATTTATAAATCCAACCTATCGAATAAGTGCGTAGAATTGCATTAACTGTTATTACTGCAGTTTAATCTTTAAGTTGTGATACTTGTGT 27 18409930 0.772176735 13 24 239 0.914285714 1.505149978 0.457142857 0.148148148 0.342857143 27 3 0 32 2R:18409884-18409994 6 imd FBtr0086725|FBtr0345891 18409794|18409794 18410171|18410171 TGCATT 6mer3-8 dme-miR-277-3p 2R - 18409885 18409993 3'utr imd FlyBase G18702.1 CGGGATATATGTGCAATATTTGATTTATAAATCCAACCTATCGAATAAGTGCGTAGAATTGCATTAACTGTTATTACTGCAGTTTAATCTTTAAGTTGTGATACTTGTG 33 18409931 0.793735591 12 26 274 0.790697674 0.929418926 0.23255814 0.272727273 0.441860465 33 6 3 34 2R:18409885-18409993 6 10 1353 FBgn0013983 396 36.13 55.28 0.025252525 0.276778301 0.18089725 -4 -3 -3.5 0.1 dme-miR-92b-3p 8mer-A1 GTGCAATA 2R 18409976 18409983 - 2R_18409976_18409983_- 0.623924939 0.61659548 0.62026021 0.005182668 imd FBtr0086725|FBtr0345891 18409794|18409794 18410171|18410171 2R - 18409884 18409994 3'utr imd FlyBase G24720.1 ACGGGATATATGTGCAATATTTGATTTATAAATCCAACCTATCGAATAAGTGCGTAGAATTGCATTAACTGTTATTACTGCAGTTTAATCTTTAAGTTGTGATACTTGTGT 27 18409984 0.772176735 13 24 239 0.914285714 1.505149978 0.457142857 0.148148148 0.342857143 27 3 0 32 2R:18409884-18409994 8 imd FBtr0086725|FBtr0345891 18409794|18409794 18410171|18410171 GTGCAATA 8mer-A1 dme-miR-92b-3p 2R - 18409885 18409993 3'utr imd FlyBase G18702.1 CGGGATATATGTGCAATATTTGATTTATAAATCCAACCTATCGAATAAGTGCGTAGAATTGCATTAACTGTTATTACTGCAGTTTAATCTTTAAGTTGTGATACTTGTG 33 18409984 0.793735591 12 26 274 0.790697674 0.929418926 0.23255814 0.272727273 0.441860465 33 6 3 34 2R:18409885-18409993 8 9 1354 FBgn0013983 396 36.13 55.28 0.022727273 0.249100471 0.162807525 1 1 1 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 18419784 18419791 + 2R_18419784_18419791_+ 0.625361047 0.62536132 0.625361184 2.12E-07 Dp1 FBtr0345226|FBtr0086682|FBtr0086679|FBtr0086680|FBtr0086681|FBtr0086683|FBtr0340329 18419424|18419424|18419424|18419424|18419424|18419424|18419424 18420742|18420742|18420742|18420742|18420742|18421124|18420742 2R + 18419761 18419817 3'utr Dp1 FlyBase G17185.1 ACACATGCTCACACATATGAAATTGCATTTATACAACATATAGAATACGAGAATCGA 84 18419783 0.807586703 7 77 648 0.914893617 1.33243846 0.031914894 0.107142857 0.20212766 84 5 3 86 2R:18419761-18419817 8 Dp1 FBtr0086683|FBtr0340329|FBtr0086680|FBtr0086681|FBtr0086682|FBtr0086679|FBtr0345226 18419424|18419424|18419424|18419424|18419424|18419424|18419424 18421124|18420742|18420742|18420742|18420742|18420742|18420742 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 18419762 18419805 3'utr Dp1 FlyBase G13102.1 CACATGCTCACACATATGAAATTGCATTTATACAACATATAGAA 41 18419783 0.964412269 4 39 282 0.938461538 1.785329835 0.123076923 0.390243902 0.615384615 41 4 0 61 2R:18419762-18419805 8 60.5 1355 FBgn0027835 9328.583333 204.7766667 314.1966667 0.006485443 0.295443817 0.192554557 1 1 1 0.1 dme-miR-1012-3p 6mer2-7 TGACTA 2R 18420019 18420024 + 2R_18420019_18420024_+ 1 1 1 0 Dp1 FBtr0345226|FBtr0086682|FBtr0086679|FBtr0086680|FBtr0086681|FBtr0086683|FBtr0340329 18419424|18419424|18419424|18419424|18419424|18419424|18419424 18420742|18420742|18420742|18420742|18420742|18421124|18420742 2R + 18419965 18420037 3'utr Dp1 FlyBase G17186.1 TCCCTAAAAGTAAGCAGAAAGTTCAGCAAAATGGTTTGTTAATTGAATTAAAACTGACTAGCGAAGCACGTTC 14 18420011 0.970726222 6 11 63 0.8125 1.113943352 0.5 0.142857143 0.25 14 3 0 13 2R:18419965-18420037 6 Dp1 FBtr0086683|FBtr0340329|FBtr0086680|FBtr0086681|FBtr0086682|FBtr0086679|FBtr0345226 18419424|18419424|18419424|18419424|18419424|18419424|18419424 18421124|18420742|18420742|18420742|18420742|18420742|18420742 TGACTA 6mer2-7 dme-miR-1012-3p 2R + 18419977 18420060 3'utr Dp1 FlyBase G13104.1 AGCAGAAAGTTCAGCAAAATGGTTTGTTAATTGAATTAAAACTGACTAGCGAAGCACGTTCAAGAACGAATGTAATTTTAAGCA 21 18420012 0.841890371 8 15 119 0.807692308 1.021189299 0.269230769 0.19047619 0.346153846 21 4 1 21 2R:18419977-18420060 6 10.5 1356 FBgn0027835 9328.583333 204.7766667 314.1966667 0.001125573 0.051275373 0.03341856 8 7 7.5 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA 2R 18420166 18420171 + 2R_18420166_18420171_+ 1 0.999905491 0.999952746 6.68E-05 Dp1 FBtr0345226|FBtr0086682|FBtr0086679|FBtr0086680|FBtr0086681|FBtr0086683|FBtr0340329 18419424|18419424|18419424|18419424|18419424|18419424|18419424 18420742|18420742|18420742|18420742|18420742|18421124|18420742 2R + 18420149 18420231 3'utr Dp1 FlyBase G17188.1 AACCCTTCCCAATTAAGTGATGATTATTATGATTTATGCGAAAGTAAATGTTAAATGAACGTTGATTGTATTGTACAAACGTT 14 18420162 0.985921137 9 14 119 1 1.176091259 0.133333333 0.071428571 0.133333333 14 0 0 15 2R:18420149-18420231 6 Dp1 FBtr0086683|FBtr0340329|FBtr0086680|FBtr0086681|FBtr0086682|FBtr0086679|FBtr0345226 18419424|18419424|18419424|18419424|18419424|18419424|18419424 18421124|18420742|18420742|18420742|18420742|18420742|18420742 TGATGA 6mer3-8 dme-miR-2a-2-5p 2R + 18420149 18420184 3'utr Dp1 FlyBase G13105.1 AACCCTTCCCAATTAAGTGATGATTATTATGATTTA 4 18420166 0.987765367 2 3 23 1 0.602059991 0 0.333333333 0.5 3 0 0 4 2R:18420149-18420184 6 5 1357 FBgn0027835 9328.583333 204.7766667 314.1966667 0.000535987 0.024416844 0.0159136 4 0 2 0.1 dme-miR-276a-3p 6mer3-8 AGTTCC 2R 18425970 18425975 + 2R_18425970_18425975_+ 0.999976951 0.999971367 0.999974159 3.96E-06 CG5174 FBtr0306637|FBtr0340359|FBtr0086687|FBtr0086686|FBtr0306636|FBtr0301149|FBtr0086690 18425446|18425446|18425446|18425446|18425446|18425446|18425446 18426221|18426221|18426221|18426221|18426221|18426221|18426221 2R + 18425897 18426001 3'utr CG5174 FlyBase G17201.1 ATTAGAAAATCATGCATTGCGGTTAAAGTGAATATACATTTGTTTTACGCTTTTATTTCTTCTCTAGGCGTTGAGTTCCGTGGTTAGATGGCGTTCCCTAATCCG 15 18425977 0.803246165 9 14 126 1 1.278753601 0.263157895 0.133333333 0.315789474 15 0 0 19 2R:18425897-18426001 6 CG5174 FBtr0301149|FBtr0086690|FBtr0306636|FBtr0086686|FBtr0340359|FBtr0086687|FBtr0306637 18425446|18425446|18425446|18425446|18425446|18425446|18425446 18426221|18426221|18426221|18426221|18426221|18426221|18426221 AGTTCC 6mer3-8 dme-miR-276a-3p 2R + 18425934 18426043 3'utr CG5174 FlyBase G13119.1 ATTTGTTTTACGCTTTTATTTCTTCTCTAGGCGTTGAGTTCCGTGGTTAGATGGCGTTCCCTAATCCGTTGAAAAGCCAATTCCAAATTTATTTAGTACTAAATATTTGT 15 18425979 0.987409418 11 14 136 0.961538462 1.096910013 0.192307692 0.6 0.769230769 15 0 1 25 2R:18425934-18426043 6 5 1358 FBgn0034345 1826.563333 198.1366667 302.45 0.002737381 0.025235107 0.016531658 -7 -9 -8 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2R 18445384 18445389 + 2R_18445384_18445389_+ 0.605668951 0.99999999 0.802834471 0.278834124 slim FBtr0086693 18444783 18445526 2R + 18445374 18445422 3'utr slim FlyBase G17219.1 AATTAACAATAAGACTCCATCAATATTGCGATATCATGTACCATGCAGT 17 18445398 0.975381481 5 16 101 0.947368421 0.954242509 0.052631579 0.117647059 0.210526316 17 0 1 18 2R:18445374-18445422 6 slim FBtr0086693 18444783 18445526 AAGACT 6mer3-8 dme-miR-14-3p 2R + 18445374 18445424 3'utr slim FlyBase G13130.1 AATTAACAATAAGACTCCATCAATATTGCGATATCATGTACCATGCAGTAC 13 18445398 0.968417423 3 12 69 0.947368421 0.954242509 0.157894737 0.384615385 0.578947368 13 0 1 18 2R:18445374-18445424 6 10.5 1359 FBgn0261477 905.8466667 35.99333333 55.57333333 0.011591366 0.291720689 0.188939539 -14 -14 -14 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2R 18445480 18445485 + 2R_18445480_18445485_+ 0.999999868 0.997914014 0.998956941 0.001474954 slim FBtr0086693 18444783 18445526 2R + 18445461 18445497 3'utr slim FlyBase G17220.1 TGCTCGGTTTACATTACCCAAGACTAAATTTGGTTGA 9 18445475 0.728883053 4 8 61 0.888888889 0.903089987 0.333333333 0 0 9 1 0 8 2R:18445461-18445497 6 slim FBtr0086693 18444783 18445526 AAGACT 6mer3-8 dme-miR-14-3p 2R + 18445433 18445492 3'utr slim FlyBase G13131.1 CTGCTCGCCCCCGTGGCGAACGTTGGTTTGCTCGGTTTACATTACCCAAGACTAAATTTG 7 18445475 0.980120861 5 7 51 1 1.041392685 0.454545455 0.285714286 0.545454545 7 0 0 11 2R:18445433-18445492 6 6.5 1360 FBgn0261477 905.8466667 35.99333333 55.57333333 0.007175607 0.180588998 0.116962572 5 5 5 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 2R 18620532 18620537 - 2R_18620532_18620537_- 1 0.980644129 0.990322064 0.013686688 Atg7 FBtr0086712|FBtr0086711 18620464|18620464 18620720|18620720 2R - 18620503 18620636 3'utr Atg7 FlyBase G24755.1 AGCATTTATAGTTCAATGTCTATACCAAAAATGTGTGTACTTCAATGCTTTTATTCTATCTAGTCGTTAAGCAAATTGTGAATCATTCAAATGAAATTGATGTGAAAATTAGGCATAAGAAAAATGTGAATTTA 39 18620528 0.981159422 11 37 268 0.957446809 1.352182518 0.170212766 0.179487179 0.319148936 39 1 1 45 2R:18620503-18620636 6 Atg7 FBtr0086712|FBtr0086711 18620464|18620464 18620720|18620720 ATGTGA 6mer3-8 dme-miR-1003-3p 2R - 18620503 18620622 3'utr Atg7 FlyBase G18724.1 AATGTCTATACCAAAAATGTGTGTACTTCAATGCTTTTATTCTATCTAGTCGTTAAGCAAATTGTGAATCATTCAAATGAAATTGATGTGAAAATTAGGCATAAGAAAAATGTGAATTTA 26 18620561 0.985100189 12 24 192 0.976744186 1.62324929 0.255813953 0.423076923 0.651162791 26 1 0 42 2R:18620503-18620622 6 10 1361 FBgn0034366 131 6.586666667 10.04 0.076335878 1.518218623 0.996015936 -9 24 7.5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 18620608 18620613 - 2R_18620608_18620613_- 0.760815935 0.505948294 0.633382114 0.180218608 Atg7 FBtr0086712|FBtr0086711 18620464|18620464 18620720|18620720 2R - 18620503 18620636 3'utr Atg7 FlyBase G24755.1 AGCATTTATAGTTCAATGTCTATACCAAAAATGTGTGTACTTCAATGCTTTTATTCTATCTAGTCGTTAAGCAAATTGTGAATCATTCAAATGAAATTGATGTGAAAATTAGGCATAAGAAAAATGTGAATTTA 39 18620601 0.981159422 11 37 268 0.957446809 1.352182518 0.170212766 0.179487179 0.319148936 39 1 1 45 2R:18620503-18620636 6 Atg7 FBtr0086712|FBtr0086711 18620464|18620464 18620720|18620720 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 18620503 18620622 3'utr Atg7 FlyBase G18724.1 AATGTCTATACCAAAAATGTGTGTACTTCAATGCTTTTATTCTATCTAGTCGTTAAGCAAATTGTGAATCATTCAAATGAAATTGATGTGAAAATTAGGCATAAGAAAAATGTGAATTTA 26 18620602 0.985100189 12 24 192 0.976744186 1.62324929 0.255813953 0.423076923 0.651162791 26 1 0 42 2R:18620503-18620622 6 9.5 1362 FBgn0034366 131 6.586666667 10.04 0.072519084 1.442307692 0.946215139 -12 -11 -11.5 0.1 dme-miR-305-5p 7mer-m8 AGTACAA 2R 18632444 18632450 - 2R_18632444_18632450_- 0.643149591 0.570195485 0.606672538 0.051586339 CG30122 FBtr0086660|FBtr0300924|FBtr0300923 18632326|18632326|18632326 18632821|18632821|18632821 2R - 18632433 18632482 3'utr CG30122 FlyBase G24772.1 GCGGTCTTTACTCTGGCACTACGTATCTAGGCAGTACAACTTGTTTTAAC 11 18632442 0.800389867 5 11 67 1 1.301029996 0.45 0.363636364 0.65 11 0 0 20 2R:18632433-18632482 7 CG30122 FBtr0300923|FBtr0300924|FBtr0086660 18632326|18632326|18632326 18632821|18632821|18632821 AGTACAA 7mer-m8 dme-miR-305-5p 2R - 18632425 18632516 3'utr CG30122 FlyBase G18735.1 TCTATATGACAGTGACGAAGCAATTGAATGAAACGCGGTCTTTACTCTGGCACTACGTATCTAGGCAGTACAACTTGTTTTAACGTTTATTA 10 18632442 0.978831488 5 10 67 1 1.146128036 0.214285714 0.3 0.5 10 0 0 14 2R:18632425-18632516 7 6.5 1363 FBgn0050122 2646.33 69.24 106.41 0.002456232 0.093876372 0.061084485 -8 -8 -8 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 2R 18632585 18632591 - 2R_18632585_18632591_- 0.782899031 0.782891018 0.782895025 5.66E-06 CG30122 FBtr0086660|FBtr0300924|FBtr0300923 18632326|18632326|18632326 18632821|18632821|18632821 2R - 18632567 18632658 3'utr CG30122 FlyBase G24773.1 AAACCAAACAATTGCGAGGGCTAACCAAACCCTAAGTCAAAATTCTTACCTTACCTTCGGATGGATTGTACAAAACTAAGACTACATATATC 51 18632593 0.937656251 11 47 300 0.911764706 1.491361694 0.088235294 0.254901961 0.441176471 51 5 1 62 2R:18632567-18632658 7 CG30122 FBtr0300923|FBtr0300924|FBtr0086660 18632326|18632326|18632326 18632821|18632821|18632821 GTACAAA 7mer-A1 dme-miR-305-5p 2R - 18632538 18632620 3'utr CG30122 FlyBase G18736.1 AAAATTCTTACCTTACCTTCGGATGGATTGTACAAAACTAAGACTACATATATCATTTGAAATTGAACGTGAATGTTTCGCTT 34 18632593 0.972391331 10 31 222 0.94 1.371067862 0.04 0.352941176 0.56 34 2 1 47 2R:18632538-18632620 7 33 1364 FBgn0050122 2646.33 69.24 106.41 0.0124701 0.47660312 0.310121229 2 2 2 0.1 dme-miR-999-3p 7mer-m8 AGTTAAC 2R 18632751 18632757 - 2R_18632751_18632757_- 0.539588728 0.674512657 0.607050693 0.095405675 CG30122 FBtr0086660|FBtr0300924|FBtr0300923 18632326|18632326|18632326 18632821|18632821|18632821 2R - 18632694 18632760 3'utr CG30122 FlyBase G24774.1 AGGAGTTAACCACAAATCTGAACTAAACTTTATATAATAGTTTTAAACGATTAACGAACAGTAAAAC 9 18632732 0.980233219 6 9 58 1 0.954242509 0.111111111 0 0 9 0 0 9 2R:18632694-18632760 7 CG30122 FBtr0300923|FBtr0300924|FBtr0086660 18632326|18632326|18632326 18632821|18632821|18632821 AGTTAAC 7mer-m8 dme-miR-999-3p 2R - 18632694 18632760 3'utr CG30122 FlyBase G18738.1 AGGAGTTAACCACAAATCTGAACTAAACTTTATATAATAGTTTTAAACGATTAACGAACAGTAAAAC 7 18632731 0.971633408 3 6 40 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 2R:18632694-18632760 7 3.5 1365 FBgn0050122 2646.33 69.24 106.41 0.001322586 0.050548816 0.032891646 -25 -26 -25.5 0.1 dme-miR-31a-5p 6mer2-7 CTTGCC 2R 18641338 18641343 - 2R_18641338_18641343_- 0.999997906 0.868698284 0.934348095 0.092842838 SP2637 FBtr0301861|FBtr0301862 18640860|18640860 18641446|18641446 2R - 18641324 18641414 5'utr SP2637 FlyBase G24798.1 CGAAAATGTCGCAGATGTGTTAATTGACTGGTGCATGTGTTAATTGTCGCTGTCCACCGCAAATGCTTCTGCTTGCCTTTTGTTTAAGTTT 18 18641338 0.687561821 10 16 170 0.857142857 0.77815125 0.238095238 0.166666667 0.285714286 18 1 2 18 2R:18641324-18641414 6 SP2637 FBtr0301861|FBtr0301862 18640860|18640860 18641446|18641446 CTTGCC 6mer2-7 dme-miR-31a-5p 2R - 18641330 18641405 5'utr SP2637 FlyBase G18754.1 CGCAGATGTGTTAATTGACTGGTGCATGTGTTAATTGTCGCTGTCCACCGCAAATGCTTCTGCTTGCCTTTTGTTT 16 18641371 0.621200146 10 13 120 0.88 1.342422681 0.12 0.3125 0.56 16 3 0 22 2R:18641330-18641405 6 5.5 1366 FBgn0034371 900.1366667 60.64 93.18 0.006110183 0.090699208 0.059025542 -5 28 11.5 0.1 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 2R 18641381 18641386 - 2R_18641381_18641386_- 0.790155742 0.557667666 0.673911704 0.164393841 SP2637 FBtr0301861|FBtr0301862 18640860|18640860 18641446|18641446 2R - 18641324 18641414 5'utr SP2637 FlyBase G24798.1 CGAAAATGTCGCAGATGTGTTAATTGACTGGTGCATGTGTTAATTGTCGCTGTCCACCGCAAATGCTTCTGCTTGCCTTTTGTTTAAGTTT 18 18641390 0.687561821 10 16 170 0.857142857 0.77815125 0.238095238 0.166666667 0.285714286 18 1 2 18 2R:18641324-18641414 6 SP2637 FBtr0301861|FBtr0301862 18640860|18640860 18641446|18641446 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 2R - 18641330 18641405 5'utr SP2637 FlyBase G18754.1 CGCAGATGTGTTAATTGACTGGTGCATGTGTTAATTGTCGCTGTCCACCGCAAATGCTTCTGCTTGCCTTTTGTTT 16 18641371 0.621200146 10 13 120 0.88 1.342422681 0.12 0.3125 0.56 16 3 0 22 2R:18641330-18641405 6 9.5 1367 FBgn0034371 900.1366667 60.64 93.18 0.010553953 0.156662269 0.101953209 4 -15 -5.5 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 18658818 18658824 - 2R_18658818_18658824_- 0.637624143 0.653042694 0.645333419 0.010902597 CG42306 FBtr0299689|FBtr0299688|FBtr0340393 18658416|18658416|18658416 18660044|18660044|18660044 2R - 18658731 18658845 5'utr CG42306 FlyBase G24809.1 TGTGTACGAAAAAATATCCGATGTGTTCGAGTTTGTCCAATCTTGCCTGGCGGACGAAAGCCTGGATTTTAGCTTGGTGTCCAACAGCGATGGCAAACTGGGCGATGAGGACTTG 22 18658824 0.980418377 8 21 151 0.96 1.380211242 0.04 0.136363636 0.24 22 1 0 24 2R:18658731-18658845 7 CG42306 FBtr0340393|FBtr0299688|FBtr0299689 18658416|18658416|18658416 18660044|18660044|18660044 TGTGTTC 7mer-m8 dme-miR-317-3p 2R - 18658788 18658835 5'utr CG42306 FlyBase G18764.1 AAAATATCCGATGTGTTCGAGTTTGTCCAATCTTGCCTGGCGGACGAA 5 18658824 0.974173228 2 4 27 1 0.84509804 0 0.2 0.428571429 5 0 0 7 2R:18658788-18658835 7 7.5 1368 FBgn0259202 627.1666667 39.15666667 59.96 0.011958544 0.191538265 0.125083389 0 0 0 0.1 dme-miR-965-3p 7mer-m8 TACGCTT 2R 18658958 18658964 - 2R_18658958_18658964_- 0.620204855 0.620204855 0.620204855 0 CG42306 FBtr0299689|FBtr0299688|FBtr0340393 18658416|18658416|18658416 18660044|18660044|18660044 2R - 18658921 18659000 5'utr CG42306 FlyBase G24810.1 GAACGCGAGGAGCAGCGCAATTTGCGCATGTATCGATACGCTTTAGTCAGGGTTAAATTTCCCAATGGACTCTTTATACA 88 18658964 0.985590529 12 82 683 0.951923077 1.393575203 0.240384615 0.159090909 0.288461538 88 2 3 99 2R:18658921-18659000 7 CG42306 FBtr0340393|FBtr0299688|FBtr0299689 18658416|18658416|18658416 18660044|18660044|18660044 TACGCTT 7mer-m8 dme-miR-965-3p 2R - 18658922 18658998 5'utr CG42306 FlyBase G18765.1 ACGCGAGGAGCAGCGCAATTTGCGCATGTATCGATACGCTTTAGTCAGGGTTAAATTTCCCAATGGACTCTTTATAC 52 18658964 0.983447231 7 51 398 1 1.875061263 0.306666667 0.288461538 0.506666667 52 0 0 75 2R:18658922-18658998 7 56 1369 FBgn0259202 627.1666667 39.15666667 59.96 0.08929046 1.430152379 0.933955971 0 0 0 0.1 dme-miR-276a-3p 6mer3-8 AGTTCC 2R 18659853 18659858 - 2R_18659853_18659858_- 0.99989702 0.999983955 0.999940487 6.15E-05 CG42306 FBtr0299689|FBtr0299688|FBtr0340393 18658416|18658416|18658416 18660044|18660044|18660044 2R - 18659843 18659918 5'utr CG42306 FlyBase G24814.1 GGCAGCGGCATGGGCACTGGCCACAAGCTGAATTCCCCCAAACAGGAGACTCCTTCAAGTAGTTCCCGCCAAAAGT 13 18659856 0.880017291 5 13 48 1 1.113943352 0.153846154 0 0 13 0 0 13 2R:18659843-18659918 6 CG42306 FBtr0340393|FBtr0299688|FBtr0299689 18658416|18658416|18658416 18660044|18660044|18660044 AGTTCC 6mer3-8 dme-miR-276a-3p 2R - 18659843 18659876 5'utr CG42306 FlyBase G18768.1 CAGGAGACTCCTTCAAGTAGTTCCCGCCAAAAGT 13 18659856 0.740489111 2 12 52 1 1.230448921 0.235294118 0.307692308 0.470588235 13 0 0 17 2R:18659843-18659876 6 9 1370 FBgn0259202 627.1666667 39.15666667 59.96 0.014350252 0.229845918 0.150100067 -2 -2 -2 0.1 dme-miR-33-5p 6mer3-8 CAATGC 2R 18667587 18667592 - 2R_18667587_18667592_- 0.999993944 0.999994717 0.999994331 5.66E-07 edl FBtr0086652 18667525 18667828 2R - 18667541 18667664 3'utr edl FlyBase G24818.1 AGATTGCTTCAAGTTTTCAATTCATTTTGAAAGAAAAGTGATTGGAGTGAATAGAATAAAAGATTGAAGTTACAATGCTGTCCTATTAGTTAACTAAGTTCGCATATGATGAAAATATAAAATG 1064 18667589 0.878959278 27 1022 10526 0.958064516 2.171726454 0.253225806 0.142857143 0.264516129 1064 45 7 1188 2R:18667541-18667664 6 edl FBtr0086652 18667525 18667828 CAATGC 6mer3-8 dme-miR-33-5p 2R - 18667527 18667654 3'utr edl FlyBase G18770.1 AAGTTTTCAATTCATTTTGAAAGAAAAGTGATTGGAGTGAATAGAATAAAAGATTGAAGTTACAATGCTGTCCTATTAGTTAACTAAGTTCGCATATGATGAAAATATAAAATGAAATTTTATAACTG 653 18667589 0.989705681 25 614 6020 0.94438723 2.184218085 0.270854789 0.370597243 0.576725026 653 49 5 917 2R:18667527-18667654 6 693.5 1371 FBgn0023214 335.02 28.75666667 44.53 2.07002567 24.11614698 15.57377049 -3 -3 -3 0.1 dme-miR-8-3p 7mer-A1 AGTATTA 2R 18667696 18667702 - 2R_18667696_18667702_- 0.823245279 0.822441747 0.822843513 0.000568231 edl FBtr0086652 18667525 18667828 2R - 18667676 18667753 3'utr edl FlyBase G24819.1 TCTAGTTATGCTAGCTTATAATGCCTAGTCCTTAGTTCTGCTCGTCATTTAAGTATTAGCGATAATATTCTGCATTTC 42 18667699 0.815674908 17 39 392 0.9375 1.176091259 0.083333333 0.095238095 0.208333333 42 1 2 45 2R:18667676-18667753 7 edl FBtr0086652 18667525 18667828 AGTATTA 7mer-A1 dme-miR-8-3p 2R - 18667680 18667746 3'utr edl FlyBase G18771.1 ATGCTAGCTTATAATGCCTAGTCCTTAGTTCTGCTCGTCATTTAAGTATTAGCGATAATATTCTGCA 29 18667721 0.732285855 12 29 243 1 1.633468456 0.11627907 0.379310345 0.581395349 29 0 0 43 2R:18667680-18667746 7 19.5 1372 FBgn0023214 335.02 28.75666667 44.53 0.05820548 0.678103628 0.437907029 -3 19 8 0.1 dme-miR-307a-3p 6mer3-8 GGTTGT 2R 18667783 18667788 - 2R_18667783_18667788_- 0.999838058 0.999824076 0.999831067 9.90E-06 edl FBtr0086652 18667525 18667828 2R - 18667766 18667902 stop_codon edl FlyBase G24820.1 TTCCCGTGGGCGGCAAGATGCTCTACCGCGACTTCCGGGTGCGACTCGCCCGAGCAATGGCCCTGCTATCATAGGGATTACCCATATATCTCACGGATACCCAGTCCTCTCTATGGTTGTACATATCTCTAGGATTC 300 18667789 0.82265435 27 270 2591 0.902506964 1.095571662 0.114206128 0.163333333 0.300835655 300 10 25 324 2R:18667766-18667902 6 edl FBtr0086652 18667525 18667828 GGTTGT 6mer3-8 dme-miR-307a-3p 2R - 18667765 18667902 stop_codon edl FlyBase G18772.1 TTCCCGTGGGCGGCAAGATGCTCTACCGCGACTTCCGGGTGCGACTCGCCCGAGCAATGGCCCTGCTATCATAGGGATTACCCATATATCTCACGGATACCCAGTCCTCTCTATGGTTGTACATATCTCTAGGATTCG 209 18667789 0.922196601 20 181 1682 0.858044164 0.94320721 0.19873817 0.365384615 0.583596215 208 15 30 272 2R:18667765-18667902 6 192.5 1373 FBgn0023214 335.02 28.75666667 44.53 0.574592562 6.694099919 4.322928363 1 1 1 0.1 dme-miR-1008-3p 8mer-A1 AGCTGTGA 2R 18704858 18704865 + 2R_18704858_18704865_+ 0.487983873 0.430630186 0.45930703 0.04055519 Sik3 FBtr0340388|FBtr0344259|FBtr0304025|FBtr0344258|FBtr0304026 18704794|18704794|18704794|18704794|18704794 18705805|18705805|18705805|18705805|18705805 2R + 18704800 18704916 3'utr Sik3 FlyBase G17294.1 TGGAATCCCGCCCTGCTAGCTACCCAAAATGACTACTCGCCTTGCCTAAACTCTGCGTAGCTGTGATTAAAGTCGATATGTACGATATAGCCATCCTAAACCAGTAGCAATTGGACA 73 18704857 0.984407599 15 66 516 0.895348837 1.284430734 0.290697674 0.109589041 0.244186047 73 6 3 77 2R:18704800-18704916 8 Sik3 FBtr0304026|FBtr0340388|FBtr0344259|FBtr0304025|FBtr0344258 18704794|18704794|18704794|18704794|18704794 18705805|18705805|18705805|18705805|18705805 AGCTGTGA 8mer-A1 dme-miR-1008-3p 2R + 18704825 18704920 3'utr Sik3 FlyBase G13180.1 AAAATGACTACTCGCCTTGCCTAAACTCTGCGTAGCTGTGATTAAAGTCGATATGTACGATATAGCCATCCTAAACCAGTAGCAATTGGACAGGAG 49 18704857 0.98051844 13 45 320 0.958333333 1.361727836 0.222222222 0.306122449 0.527777778 49 1 2 69 2R:18704825-18704920 8 45 1374 FBgn0262103 424.8866667 8.64 13.18 0.105910596 5.208333333 3.414264036 1 1 1 0.1 dme-miR-308-3p 8mer-m1 CTGTGATT 2R 18705649 18705656 + 2R_18705649_18705656_+ 0.383625054 0.383395159 0.383510106 0.000162564 Sik3 FBtr0340388|FBtr0344259|FBtr0304025|FBtr0344258|FBtr0304026 18704794|18704794|18704794|18704794|18704794 18705805|18705805|18705805|18705805|18705805 2R + 18705602 18705701 3'utr Sik3 FlyBase G17298.1 ACGGATTAAACACAACATTGATAAATCTATTTTTTAATGAAAGACTGCTGTGATTTTACATGTAATTAATTTAGAGCGAAAGAAGGTAGGAGTAAATAAC 277 18705647 0.987338983 20 271 2392 0.973988439 2.527629901 0.046242775 0.198555957 0.358381503 277 9 0 337 2R:18705602-18705701 8 Sik3 FBtr0304026|FBtr0340388|FBtr0344259|FBtr0304025|FBtr0344258 18704794|18704794|18704794|18704794|18704794 18705805|18705805|18705805|18705805|18705805 CTGTGATT 8mer-m1 dme-miR-308-3p 2R + 18705620 18705693 3'utr Sik3 FlyBase G13186.1 TGATAAATCTATTTTTTAATGAAAGACTGCTGTGATTTTACATGTAATTAATTTAGAGCGAAAGAAGGTAGGAG 262 18705647 0.987533432 15 259 2301 0.984415584 2.57863921 0.051948052 0.351145038 0.558441558 262 6 0 379 2R:18705620-18705693 8 261.5 1375 FBgn0262103 424.8866667 8.64 13.18 0.61545824 30.2662037 19.84066768 2 2 2 0.1 dme-miR-276a-3p 6mer3-8 AGTTCC 2R 18773994 18773999 + 2R_18773994_18773999_+ 0.999877859 0.999858133 0.999867996 1.40E-05 Mctp FBtr0346955|FBtr0330004|FBtr0110970|FBtr0345950|FBtr0330005|FBtr0110971 18773742|18773952|18773742|18773742|18773742|18773742 18774667|18774667|18774667|18774824|18774667|18774667 2R + 18773862 18774077 3'utr Mctp FlyBase G17316.1 TGATGCAGCGCTTCCGGGCCAACACCAGCCAGTTGAAGCACAAGTTTGGCCAGGCCAAGAGCCTCAGTCTGAGCCATAGCGAATTCAATTAGACACCAAAGTTAGTTAGCTAGTTAAGAATCGAAGTCAACCAGTTCCACCCATAGAAGGAAACAACACACGCAATTCACCTTGACTCAATTATGCAGCACAAAATTGCTTTACTTATTTTAATAT 246 18773996 0.905648492 25 236 1143 0.939799331 1.971585065 0.193979933 0.174796748 0.321070234 246 16 2 281 2R:18773862-18774077 6 Mctp FBtr0330005|FBtr0110971|FBtr0346955|FBtr0330004|FBtr0110970|FBtr0345950 18773742|18773742|18773742|18773952|18773742|18773742 18774667|18774667|18774667|18774667|18774667|18774824 AGTTCC 6mer3-8 dme-miR-276a-3p 2R + 18773842 18774020 3'utr Mctp FlyBase G13200.1 CGGCGGAAGGCAGCAGCAGTTGATGCAGCGCTTCCGGGCCAACACCAGCCAGTTGAAGCACAAGTTTGGCCAGGCCAAGAGCCTCAGTCTGAGCCATAGCGAATTCAATTAGACACCAAAGTTAGTTAGCTAGTTAAGAATCGAAGTCAACCAGTTCCACCCATAGAAGGAAACAACAC 102 18773996 0.965449706 15 90 427 0.918367347 2.130333768 0.197278912 0.396039604 0.585034014 101 12 0 135 2R:18773842-18774020 6 75.5 1376 FBgn0034389 335.3666667 10.34333333 15.83333333 0.225126727 7.299387689 4.768421053 -2 -2 -2 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2R 18774214 18774219 + 2R_18774214_18774219_+ 0.999786839 0.999933111 0.999859975 0.00010345 Mctp FBtr0346955|FBtr0330004|FBtr0110970|FBtr0345950|FBtr0330005|FBtr0110971 18773742|18773952|18773742|18773742|18773742|18773742 18774667|18774667|18774667|18774824|18774667|18774667 2R + 18774152 18774265 3'utr Mctp FlyBase G17317.2 AAGCGATTATGTACATACACAATGATAGCGGATATAAATAGGAATCTATTGAAACATTGCATGTACCTAAGGTAACCTCTCTCAAAGATCTATTCGAATATTTACCAAAACTCA 124 18774213 0.777117406 18 117 790 0.954248366 1.687231601 0.117647059 0.185483871 0.339869281 124 5 2 146 2R:18774152-18774265 6 Mctp FBtr0330005|FBtr0110971|FBtr0346955|FBtr0330004|FBtr0110970|FBtr0345950 18773742|18773742|18773742|18773952|18773742|18773742 18774667|18774667|18774667|18774667|18774667|18774824 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2R + 18774187 18774250 3'utr Mctp FlyBase G13202.2 AAATAGGAATCTATTGAAACATTGCATGTACCTAAGGTAACCTCTCTCAAAGATCTATTCGAAT 63 18774213 0.776665747 10 61 381 0.958762887 1.968482949 0.072164948 0.428571429 0.628865979 63 4 0 93 2R:18774187-18774250 6 72 1377 FBgn0034389 335.3666667 10.34333333 15.83333333 0.214690389 6.961005479 4.547368421 1 1 1 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2R 18794753 18794758 - 2R_18794753_18794758_- 0.999998538 0.999998259 0.999998398 1.41E-07 MFS15 FBtr0086636|FBtr0086637 18794616|18794616 18794808|18794808 2R - 18794690 18794794 3'utr MFS15 FlyBase G24838.1 CGTGGCCTAAGGATTGGTTGTAGATGTGAAACATTTGTACCTTGAAGGCGAAGCATTCCTTGGAATTGATGAATCGCAATTAGTATCGTATTACTAGTTATACAC 155 18794759 0.843930028 15 151 1016 0.978142077 2.252853031 0.398907104 0.15483871 0.284153005 155 4 0 179 2R:18794690-18794794 6 MFS15 FBtr0086637|FBtr0086636 18794616|18794616 18794808|18794808 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2R - 18794689 18794791 3'utr MFS15 FlyBase G18790.1 GGCCTAAGGATTGGTTGTAGATGTGAAACATTTGTACCTTGAAGGCGAAGCATTCCTTGGAATTGATGAATCGCAATTAGTATCGTATTACTAGTTATACACG 104 18794759 0.977631924 14 101 669 0.972222222 2.146128036 0.381944444 0.317307692 0.506944444 104 4 0 140 2R:18794689-18794791 6 114.5 1378 FBgn0034392 393.6666667 26.16666667 39.91 0.290855207 4.375796178 2.868955149 1 1 1 0.1 dme-miR-11-3p 7mer-m1 TGTGATG 2R 18797094 18797100 - 2R_18797094_18797100_- 0.514462858 0.51134548 0.512904169 0.002204335 l(2)08717 FBtr0345426 18796973 18797478 2R - 18797070 18797124 3'utr l(2)08717 FlyBase G24849.1 TTAAGTTAGGCATTAGCGAAAACTTGTGATGAAAAAAGTAAACTAAAAAAGGCAA 467 18797101 0.808376542 6 422 2218 0.912162162 1.119609903 0.089527027 0.207708779 0.375 467 12 40 540 2R:18797070-18797124 7 l(2)08717 FBtr0345426 18796973 18797478 TGTGATG 7mer-m1 dme-miR-11-3p 2R - 18797069 18797122 3'utr l(2)08717 FlyBase G18796.1 AAGTTAGGCATTAGCGAAAACTTGTGATGAAAAAAGTAAACTAAAAAAGGCAAA 334 18797101 0.801552329 5 297 1513 0.902083333 1.117973956 0.070833333 0.317365269 0.525 334 15 32 433 2R:18797069-18797122 7 397 1379 FBgn0010651 461.1766667 23.46 35.57 0.860841471 16.92242114 11.16109081 1 1 1 0.1 dme-miR-252-5p 6mer3-8 GTACTT 2R 18821341 18821346 + 2R_18821341_18821346_+ 0.999999929 0.999999999 0.999999964 7.07E-08 Phb2 FBtr0086616|FBtr0086615|FBtr0086614|FBtr0112863 18821290|18821290|18821290|18821290 18821839|18821839|18821839|18821839 2R + 18821308 18821358 3'utr Phb2 FlyBase G17331.1 CAAAAAGAGTTTACTTTTAAGTTGAAAACACTTGTACTTTTGGTTTCAATC 20 18821340 0.98698034 5 20 181 1 1.380211242 0.166666667 0.2 0.333333333 20 0 0 24 2R:18821308-18821358 6 Phb2 FBtr0086615|FBtr0086614|FBtr0112863|FBtr0086616 18821290|18821290|18821290|18821290 18821839|18821839|18821839|18821839 GTACTT 6mer3-8 dme-miR-252-5p 2R + 18821326 18821393 3'utr Phb2 FlyBase G13214.1 AAGTTGAAAACACTTGTACTTTTGGTTTCAATCACATTGGCCAAAACTTAGACATAGCCTTCATAATT 22 18821340 0.854977068 9 22 164 1 1.531478917 0.294117647 0.454545455 0.647058824 22 0 0 34 2R:18821326-18821393 6 17.5 1380 FBgn0010551 1156.073333 96.49666667 146.7133333 0.015137448 0.181353415 0.119280229 1 1 1 0.1 dme-miR-986-5p 6mer2-7 TTCGAG 2R 18821554 18821559 + 2R_18821554_18821559_+ 0.999952298 1 0.999976149 3.37E-05 Phb2 FBtr0086616|FBtr0112861|FBtr0086615|FBtr0086614|FBtr0112863 18821290|18821508|18821290|18821290|18821290 18821839|18821839|18821839|18821839|18821839 2R + 18821543 18821595 3'utr Phb2 FlyBase G17334.1 ATTGAAATTCCTTCGAGCTAGAGCCTAAGTACCGTTTAGTTTTAACCACTCCC 7 18821550 0.985069156 3 6 50 0.875 0.84509804 0.125 0.142857143 0.25 7 1 0 7 2R:18821543-18821595 6 Phb2 FBtr0086615|FBtr0086614|FBtr0112863|FBtr0086616|FBtr0112861 18821290|18821290|18821290|18821290|18821508 18821839|18821839|18821839|18821839|18821839 TTCGAG 6mer2-7 dme-miR-986-5p 2R + 18821543 18821573 3'utr Phb2 FlyBase G13215.1 ATTGAAATTCCTTCGAGCTAGAGCCTAAGTA 6 18821551 0.66355227 3 5 34 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2R:18821543-18821573 6 5 1381 FBgn0010551 1156.073333 96.49666667 146.7133333 0.004324985 0.051815261 0.034080065 4 3 3.5 0.1 dme-miR-263a-5p 6mer3-8 GTGCCA 2R 18821690 18821695 + 2R_18821690_18821695_+ 0.999975715 0.999953655 0.999964685 1.56E-05 Phb2 FBtr0112861|FBtr0086615|FBtr0086614|FBtr0112863 18821508|18821290|18821290|18821290 18821839|18821839|18821839|18821839 2R + 18821677 18821710 3'utr Phb2 FlyBase G17335.1 ATCCGTTCACTGGGTGCCAAGGATTGAAACACGG 22 18821687 0.728859539 4 21 93 0.965517241 1.447158031 0.172413793 0.272727273 0.448275862 22 1 0 28 2R:18821677-18821710 6 Phb2 FBtr0086615|FBtr0086614|FBtr0112863|FBtr0112861 18821290|18821290|18821290|18821508 18821839|18821839|18821839|18821839 GTGCCA 6mer3-8 dme-miR-263a-5p 2R + 18821677 18821702 3'utr Phb2 FlyBase G13216.1 ATCCGTTCACTGGGTGCCAAGGATTG 20 18821687 0.737826102 3 17 81 0.866666667 1.414973348 0.4 0.3 0.533333333 20 4 0 26 2R:18821677-18821702 6 21 1382 FBgn0010551 1156.073333 96.49666667 146.7133333 0.018164938 0.217624098 0.143136275 3 3 3 0.1 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 18822136 18822143 + 2R_18822136_18822143_+ 0.605647183 0.605654061 0.605650622 4.88E-06 Phb2 FBtr0112862 18822099 18822250 2R + 18822046 18822155 stop_codon Phb2 FlyBase G17337.1 GAAGGAGAAGAACGTGGGCAACGTGGCGAGCAGCATGGCCGAGCGGATGATGTGATCCACACCTTAGCGGGGGCTTCCTGTCAAGATCCTAGTACAAAGCGCATACAGAA 31 18822135 0.971134777 7 24 133 0.815789474 1.190331698 0.342105263 0.193548387 0.342105263 31 6 1 31 2R:18822046-18822155 8 Phb2 FBtr0112862 18822099 18822250 AGTACAAA 8mer-A1 dme-miR-305-5p 2R + 18822109 18822161 3'utr Phb2 FlyBase G13218.1 TTAGCGGGGGCTTCCTGTCAAGATCCTAGTACAAAGCGCATACAGAACAGAGC 23 18822135 0.951850554 5 15 116 0.676470588 0.884606581 0.235294118 0.347826087 0.558823529 23 9 2 23 2R:18822109-18822161 8 21.5 1383 FBgn0010551 1156.073333 96.49666667 146.7133333 0.018597436 0.222805624 0.146544281 1 1 1 0.1 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2R 18822378 18822385 - 2R_18822378_18822385_- 0.631136596 0.631136612 0.631136604 0 CG15097 FBtr0303237|FBtr0330604|FBtr0086630|FBtr0330605 18822186|18822186|18822186|18822186 18822959|18822608|18822959|18822581 2R - 18822327 18822400 3'utr CG15097 FlyBase G24859.1 ACACACACACATGTTTCTAGTCAAGATCTCTCACACACACACAACATGGGAATGCCGCGGGGACACAACTCCTG 133 18822386 0.999702155 8 127 871 0.960784314 1.69019608 0.019607843 0.135338346 0.248366013 133 4 2 147 2R:18822327-18822400 8 CG15097 FBtr0330605|FBtr0086630|FBtr0330604|FBtr0303237 18822186|18822186|18822186|18822186 18822581|18822959|18822608|18822959 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R - 18822357 18822400 3'utr CG15097 FlyBase G18804.1 ACACACACACATGTTTCTAGTCAAGATCTCTCACACACACACAA 74 18822386 0.83947615 9 71 461 0.965217391 2.045322979 0.017391304 0.432432432 0.634782609 74 4 0 111 2R:18822357-18822400 8 101 1384 FBgn0034396 75.66666667 3.096666667 4.676666667 1.334801762 32.61571582 21.59657876 1 1 1 0.1 dme-miR-986-5p 6mer2-7 TTCGAG 2R 18822506 18822511 - 2R_18822506_18822511_- 0.974780678 0.9997123 0.987246489 0.017629303 CG15097 FBtr0303237|FBtr0330604|FBtr0086630|FBtr0330605 18822186|18822186|18822186|18822186 18822959|18822608|18822959|18822581 2R - 18822456 18822553 3'utr CG15097 FlyBase G24860.1 ATACAAAGCTAACCCCACGCGCCTAATGCAGGAATTTGATTGTTCGAGTTCGTTATGGATAGACTTAAGAATATTTATATGACTTGGAGACCCCGGGC 42 18822494 0.981677659 11 39 283 0.891304348 1.612783857 0.260869565 0.071428571 0.152173913 42 5 0 41 2R:18822456-18822553 6 CG15097 FBtr0330605|FBtr0086630|FBtr0330604|FBtr0303237 18822186|18822186|18822186|18822186 18822581|18822959|18822608|18822959 TTCGAG 6mer2-7 dme-miR-986-5p 2R - 18822481 18822542 3'utr CG15097 FlyBase G18805.2 ACCCCACGCGCCTAATGCAGGAATTTGATTGTTCGAGTTCGTTATGGATAGACTTAAGAATA 23 18822495 0.950923226 8 22 154 0.966666667 1.462397998 0.3 0.260869565 0.433333333 23 1 0 29 2R:18822481-18822542 6 18 1385 FBgn0034396 75.66666667 3.096666667 4.676666667 0.237885463 5.81270183 3.848895225 -17 -16 -16.5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 18833538 18833543 - 2R_18833538_18833543_- 0.984270413 0.99914175 0.991706081 0.010515597 CG15098 FBtr0086629 18833370 18833650 2R - 18833476 18833565 3'utr CG15098 FlyBase G24867.1 CAATATTTTTCTAGCTAGTAGCACCAAAATTATATACTACGTTGTATTTCATGCATCAGAGAATGAAAATCTGTGTGTACATCATATATA 63 18833536 0.894179267 16 61 431 0.958333333 1.537819095 0.097222222 0.126984127 0.236111111 63 2 1 69 2R:18833476-18833565 6 CG15098 FBtr0086629 18833370 18833650 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 18833525 18833564 3'utr CG15098 FlyBase G18812.1 AATATTTTTCTAGCTAGTAGCACCAAAATTATATACTACG 22 18833536 0.829882296 7 19 150 0.9 1.431363764 0.033333333 0.318181818 0.5 22 3 0 27 2R:18833525-18833564 6 28.5 1386 FBgn0034398 1735.853333 226.72 344.04 0.016418438 0.125705716 0.082839205 -7 -7 -7 0.1 dme-miR-986-5p 6mer2-7 TTCGAG 2R 18837284 18837289 - 2R_18837284_18837289_- 0.999990234 0.999997291 0.999993763 5.02E-06 CG15099 FBtr0086628 18836819 18837346 2R - 18837228 18837322 3'utr CG15099 FlyBase G24876.1 ACGCAGTCGCAGATCCAAGCGAGTGGGTCACACTTCGAGCTCAAGCTGAACCTGAACCTAGGTATGGAGTCTGCCATGGAGTCGGGCAGTACTGG 35 18837288 0.951119793 10 33 143 0.972222222 1.544068044 0.361111111 0.058823529 0.111111111 34 1 0 35 2R:18837228-18837322 6 CG15099 FBtr0086628 18836819 18837346 TTCGAG 6mer2-7 dme-miR-986-5p 2R - 18837233 18837306 3'utr CG15099 FlyBase G18819.1 AAGCGAGTGGGTCACACTTCGAGCTCAAGCTGAACCTGAACCTAGGTATGGAGTCTGCCATGGAGTCGGGCAGT 16 18837288 0.717558608 7 15 74 0.947368421 1.255272505 0.421052632 0.1875 0.315789474 16 1 0 18 2R:18837233-18837306 6 16.5 1387 FBgn0034400 3071.393333 43.47333333 66.98666667 0.005372155 0.379543015 0.246317675 -1 -1 -1 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 18846948 18846955 - 2R_18846948_18846955_- 0.625363909 0.625364269 0.625364089 2.83E-07 CG15100 FBtr0086627 18846856 18847082 2R - 18846901 18847065 3'utr CG15100 FlyBase G24926.1 TAAAAATCACGCTGGACGCTTTTACCTCAGCCCTTTTAATCAGGCATTCGATGGCAAATCTTTAGTCACGGACTGGCACAGTTCAATTCATCTCCCATAAGTTTTGCGTTTGCATTTAACAACCTTTTGTATTTATTCGAAGTATGGCTAAATATTCAGTTAGTA 38 18846956 0.797852664 12 38 298 1 1.643452676 0.113636364 0.105263158 0.227272727 38 0 0 44 2R:18846901-18847065 8 CG15100 FBtr0086627 18846856 18847082 TGCATTTA 8mer-A1 dme-miR-277-3p 2R - 18846928 18846967 3'utr CG15100 FlyBase G18855.1 AAGTTTTGCGTTTGCATTTAACAACCTTTTGTATTTATTC 11 18846956 0.989241882 2 10 103 0.923076923 1.079181246 0 0.181818182 0.307692308 11 1 0 12 2R:18846928-18846967 8 12.5 1388 FBgn0034401 874.54 30.91333333 47.1 0.014293228 0.404356265 0.265392781 1 1 1 0.1 dme-miR-14-3p 7mer-m8 AAGACTG 2R 18971406 18971412 - 2R_18971406_18971412_- 0.669079022 0.671795607 0.670437314 0.001920926 CG15107 FBtr0331978|FBtr0086600 18971307|18971307 18971590|18971590 2R - 18971383 18971423 3'utr CG15107 FlyBase G24977.1 TAGTCGTTTTTAAGACTGTTGTTATGCATATCGTTCGACGA 9 18971403 0.633926329 4 7 86 0.818181818 0.954242509 0.090909091 0.222222222 0.363636364 9 2 0 9 2R:18971383-18971423 7 CG15107 FBtr0086600|FBtr0331978 18971307|18971307 18971590|18971590 AAGACTG 7mer-m8 dme-miR-14-3p 2R - 18971401 18971422 3'utr CG15107 FlyBase G18891.1 AGTCGTTTTTAAGACTGTTGTT 5 18971405 0.788339959 2 2 27 0.444444444 0.602059991 0.777777778 0.4 0.666666667 5 5 0 4 2R:18971401-18971422 7 6.5 1389 FBgn0041702 455.9833333 51.29666667 78.86 0.014254907 0.126713887 0.08242455 -9 -7 -8 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2R 19133203 19133208 + 2R_19133203_19133208_+ 1 1 1 0 botv FBtr0086579 19133117 19133706 2R + 19133050 19133222 stop_codon botv FlyBase G17377.1 CGAGCGGACTCCATTCTCTTCAAGACGCGCATCCCGCACGACAAGCAAAAGTGCTTCAAGTACATCTAGTCGTACAACTGATCCCAGAATCCCTATTCCGACAAAGGCGGCCACTTCACTTATTATAACGAGGTGATCACCAGCTGAATGACTTCTAGTTGTAAGTAAAACTT 137 19133205 0.787927289 25 131 885 0.942675159 2.170261715 0.070063694 0.102189781 0.21656051 137 9 0 148 2R:19133050-19133222 6 botv FBtr0086579 19133117 19133706 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 19133045 19133224 stop_codon botv FlyBase G13244.1 AGTACCGAGCGGACTCCATTCTCTTCAAGACGCGCATCCCGCACGACAAGCAAAAGTGCTTCAAGTACATCTAGTCGTACAACTGATCCCAGAATCCCTATTCCGACAAAGGCGGCCACTTCACTTATTATAACGAGGTGATCACCAGCTGAATGACTTCTAGTTGTAAGTAAAACTTAT 68 19133205 0.979698851 15 61 440 0.91 1.481920138 0.13 0.338235294 0.55 68 7 2 91 2R:19133045-19133224 6 57.5 1390 FBgn0027535 455.35 15.33 23.50666667 0.126276491 3.750815395 2.446114577 -2 -2 -2 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 2R 19133618 19133623 + 2R_19133618_19133623_+ 0.999999911 0.999542258 0.999771085 0.000323572 botv FBtr0086579 19133117 19133706 2R + 19133570 19133660 3'utr botv FlyBase G17380.1 AGGAAATAGTCTTGAGTAGAGATACCAAATCAAATTTTGAGACTTTATTGTGTTTGCTTAATTAGCATAAGTTGTGTACCGATTTTGAATT 36 19133607 0.960860407 12 35 330 1 1.633468456 0.162790698 0.111111111 0.255813953 36 0 0 43 2R:19133570-19133660 6 botv FBtr0086579 19133117 19133706 TGTGTT 6mer3-8 dme-miR-317-3p 2R + 19133570 19133656 3'utr botv FlyBase G13246.1 AGGAAATAGTCTTGAGTAGAGATACCAAATCAAATTTTGAGACTTTATTGTGTTTGCTTAATTAGCATAAGTTGTGTACCGATTTTG 14 19133606 0.984779594 11 14 117 1 1.342422681 0.454545455 0.428571429 0.636363636 14 0 0 22 2R:19133570-19133656 6 15.5 1391 FBgn0027535 455.35 15.33 23.50666667 0.03403975 1.011089367 0.659387408 11 12 11.5 0.1 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2R 19134188 19134193 - 2R_19134188_19134193_- 0.788845554 0.733543321 0.761194438 0.039104631 CG15118 FBtr0086592|FBtr0086590|FBtr0086591|FBtr0113096 19133725|19133725|19133725|19133725 19134214|19134214|19134214|19134530 2R - 19134151 19134365 stop_codon CG15118 FlyBase G24989.1 AGACGACGATGGTGGCTTCCGGTATGTGGATCCCGATTTGGCCATGGCCATGCGACTGTCACAGCAAGAGCAGAGAAAGTTCGAACTGGAGCGGCAGCAGGAGCAGGAGATGATCGAGCAGGCGTTAAAGCTTAGCCTGCAAGAGCACTAATATACTATCAGCAATTCCAAATTGAAGTTATATTGATTTCAAGTGTAACCTTCGGGCTAAGTTG 70 19134182 0.98355735 23 68 521 0.974358974 1.880813592 0.307692308 0.1 0.192307692 70 2 0 76 2R:19134151-19134365 6 CG15118 FBtr0113096|FBtr0086591|FBtr0086590|FBtr0086592 19133725|19133725|19133725|19133725 19134530|19134214|19134214|19134214 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2R - 19134092 19134215 stop_codon CG15118 FlyBase G18900.2 ATATACTATCAGCAATTCCAAATTGAAGTTATATTGATTTCAAGTGTAACCTTCGGGCTAAGTTGTATAAATACTACGAGTACTTTAAGTTACCCTCGCATCCTTCTGCGCCCTGTCCTTGTTT 45 19134182 0.961756419 14 38 380 0.818181818 0.829303773 0.303030303 0.355555556 0.560606061 45 5 7 54 2R:19134092-19134215 6 36 1392 FBgn0034418 690.5133333 34.72333333 53.01 0.052135127 1.036766823 0.679117148 -11 -11 -11 0.1 dme-miR-283-5p 7mer-A1 GATATTA 2R 19140920 19140926 + 2R_19140920_19140926_+ 0.782911824 0.78291182 0.782911822 0 CG15111 FBtr0086581|FBtr0086580 19140905|19140905 19141034|19141034 2R + 19140871 19140934 stop_codon CG15111 FlyBase G17386.1 AAGTTTGTGGAGAACTACCGTGACGCCGTATACTAGGTGCGATCAACTGGATATTAATTTATGT 13 19140914 0.76680705 6 11 71 0.875 1.146128036 0.25 0.230769231 0.375 13 2 0 14 2R:19140871-19140934 7 CG15111 FBtr0086580|FBtr0086581 19140905|19140905 19141034|19141034 GATATTA 7mer-A1 dme-miR-283-5p 2R + 19140894 19140935 stop_codon CG15111 FlyBase G13251.1 CGCCGTATACTAGGTGCGATCAACTGGATATTAATTTATGTA 5 19140918 0.943838026 3 5 39 1 0.903089987 0 0.6 0.75 5 0 0 8 2R:19140894-19140935 7 5.5 1393 FBgn0034419 145.4233333 10.22333333 15.81333333 0.037820616 0.537985002 0.347807757 6 2 4 0.1 dme-miR-278-3p 6mer3-8 CCCACC 2R 19162210 19162215 + 2R_19162210_19162215_+ 0.527121726 0.798541396 0.662831561 0.19192271 ena FBtr0100176|FBtr0086582|FBtr0114623|FBtr0340450|FBtr0086583|FBtr0086584 19161687|19161687|19161687|19161687|19161687|19161687 19162598|19162598|19162598|19163705|19162598|19162598 2R + 19162186 19162334 3'utr ena FlyBase G17407.1 TTTTTCGTTTGTTCTCCATACTACCCCACCTCTACCTTTTAGTTTGTTATGCTCGCCGGGATTTATCTATTGTTTCGTACCAAAAAACAACAAAATCAAAATGAACAACGTTTGTAATTATACATAGAACGTATCTCTCTATACACAGC 78 19162224 0.98295812 20 74 620 0.96875 1.968482949 0.208333333 0.166666667 0.322916667 78 3 0 93 2R:19162186-19162334 6 ena FBtr0086583|FBtr0086584|FBtr0114623|FBtr0340450|FBtr0100176|FBtr0086582 19161687|19161687|19161687|19161687|19161687|19161687 19162598|19162598|19162598|19163705|19162598|19162598 CCCACC 6mer3-8 dme-miR-278-3p 2R + 19162187 19162361 3'utr ena FlyBase G13272.1 TTTTCGTTTGTTCTCCATACTACCCCACCTCTACCTTTTAGTTTGTTATGCTCGCCGGGATTTATCTATTGTTTCGTACCAAAAAACAACAAAATCAAAATGAACAACGTTTGTAATTATACATAGAACGTATCTCTCTATACACAGCCACAAAAACATGCATATATATATATAT 63 19162224 0.907698834 25 58 489 0.933333333 1.924279286 0.188888889 0.317460317 0.522222222 63 6 0 84 2R:19162187-19162361 6 22.5 1394 FBgn0000578 7091.176667 212.0766667 326.4733333 0.003172957 0.106093708 0.068918339 -14 -14 -14 0.1 dme-miR-968-5p 6mer3-8 ACTACT 2R 19162388 19162393 + 2R_19162388_19162393_+ 0.986593689 0.999999998 0.993296844 0.009479686 ena FBtr0100176|FBtr0086582|FBtr0114623|FBtr0340450|FBtr0086583|FBtr0086584 19161687|19161687|19161687|19161687|19161687|19161687 19162598|19162598|19162598|19163705|19162598|19162598 2R + 19162374 19162480 3'utr ena FlyBase G17408.1 TTTAATATATATGGACTACTCATTAAACTAACCTAAAGGGAACTAGTATTACGACTCAAAAACGAAATGAAAACAATTCCACAAACGTCATCCATCAAAGCTCCTGA 41 19162388 0.952222152 13 38 244 0.918367347 1.653212514 0.020408163 0.170731707 0.306122449 41 4 0 45 2R:19162374-19162480 6 ena FBtr0086583|FBtr0086584|FBtr0114623|FBtr0340450|FBtr0100176|FBtr0086582 19161687|19161687|19161687|19161687|19161687|19161687 19162598|19162598|19162598|19163705|19162598|19162598 ACTACT 6mer3-8 dme-miR-968-5p 2R + 19162372 19162453 3'utr ena FlyBase G13273.1 GGTTTAATATATATGGACTACTCATTAAACTAACCTAAAGGGAACTAGTATTACGACTCAAAAACGAAATGAAAACAATTCC 36 19162386 0.981496756 11 35 251 0.979591837 1.681241237 0 0.305555556 0.489795918 36 1 0 48 2R:19162372-19162453 6 27.5 1395 FBgn0000578 7091.176667 212.0766667 326.4733333 0.003878059 0.129670088 0.084233526 0 2 1 0.1 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA 2R 19226817 19226824 + 2R_19226817_19226824_+ 0.627002016 0.627001427 0.627001721 4.24E-07 hppy FBtr0340454|FBtr0340456|FBtr0086504|FBtr0340455|FBtr0086503 19226138|19226138|19226138|19226138|19226138 19227193|19227193|19227193|19227193|19227193 2R + 19226762 19226838 3'utr hppy FlyBase G17434.1 GGTTAAACTGCTTTCGATTGGCTCAAAACCGCAACGGAAAATCAAGAACGAGAAATTGAAGAATGCGATATAGGATG 60 19226817 0.932200672 4 58 215 0.96969697 1.505149978 0.090909091 0.1 0.181818182 60 1 1 64 2R:19226762-19226838 8 hppy FBtr0086503|FBtr0340454|FBtr0340456|FBtr0086504|FBtr0340455 19226138|19226138|19226138|19226138|19226138 19227193|19227193|19227193|19227193|19227193 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p 2R + 19226805 19226840 3'utr hppy FlyBase G13296.1 AAGAACGAGAAATTGAAGAATGCGATATAGGATGAT 38 19226817 0.941939091 2 37 138 0.96 1.681241237 0.18 0.315789474 0.48 38 2 0 48 2R:19226805-19226840 8 46 1396 FBgn0263395 662.23 18.48666667 28.52 0.069462271 2.488279841 1.612903226 0 0 0 0.1 dme-miR-33-5p 7mer-A1 AATGCAA 2R 19226912 19226918 + 2R_19226912_19226918_+ 0.782911816 0.773130915 0.778021366 0.006916141 hppy FBtr0340454|FBtr0340456|FBtr0086504|FBtr0340455|FBtr0086503 19226138|19226138|19226138|19226138|19226138 19227193|19227193|19227193|19227193|19227193 2R + 19226893 19226934 3'utr hppy FlyBase G17435.1 ACGAATTCAAAACAAAATAAATGCAAATTAATGGTCTGTATC 10 19226924 0.973942569 3 9 55 0.923076923 1.079181246 0.076923077 0.3 0.461538462 10 1 0 12 2R:19226893-19226934 7 hppy FBtr0086503|FBtr0340454|FBtr0340456|FBtr0086504|FBtr0340455 19226138|19226138|19226138|19226138|19226138 19227193|19227193|19227193|19227193|19227193 AATGCAA 7mer-A1 dme-miR-33-5p 2R + 19226896 19227043 3'utr hppy FlyBase G13297.1 AATTCAAAACAAAATAAATGCAAATTAATGGTCTGTATCTGTATGTTAAAAAAGTAAACTGATTGTCATAGTTACGGTTCTAGGCTATAAGATAAGCGATGAAAACAGACAACTTTCCGAACAGCACATTTGTCGATTGAGTTGTATA 40 19226910 0.997036693 12 39 260 0.98 1.69019608 0.24 0.225 0.38 40 1 0 49 2R:19226896-19227043 7 10.5 1397 FBgn0263395 662.23 18.48666667 28.52 0.015855518 0.56797692 0.368162693 -12 2 -5 0.1 dme-miR-999-3p 8mer-A1 AGTTAACA 2R 19307854 19307861 - 2R_19307854_19307861_- 0.643925718 0.643926234 0.643925976 3.54E-07 EndoB FBtr0113097|FBtr0113098|FBtr0086558|FBtr0086559 19307445|19307445|19307445|19307445 19308386|19308386|19308386|19308386 2R - 19307823 19307866 3'utr EndoB FlyBase G25011.1 ATCTTAGTTAACAAGCGAAATTCTCTGTGCTTTACTATATATCC 10 19307836 0.986357798 6 10 89 1 1.079181246 0.25 0.2 0.333333333 10 0 0 12 2R:19307823-19307866 8 EndoB FBtr0086559|FBtr0086558|FBtr0113098|FBtr0113097 19307445|19307445|19307445|19307445 19308386|19308386|19308386|19308386 AGTTAACA 8mer-A1 dme-miR-999-3p 2R - 19307821 19307874 3'utr EndoB FlyBase G18922.1 TTGTCAATATCTTAGTTAACAAGCGAAATTCTCTGTGCTTTACTATATATCCTA 6 19307838 0.985975524 4 6 56 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 2R:19307821-19307874 8 5 1398 FBgn0034433 435.3966667 24.15666667 36.94666667 0.011483781 0.2069822 0.135330206 -25 -23 -24 0.1 dme-miR-12-5p 8mer-A1 AATACTCA 2R 19308294 19308301 - 2R_19308294_19308301_- 0.643927113 0.643927113 0.643927113 0 EndoB FBtr0113097|FBtr0113098|FBtr0086558|FBtr0086559 19307445|19307445|19307445|19307445 19308386|19308386|19308386|19308386 2R - 19308283 19308315 3'utr EndoB FlyBase G25012.1 ACTCCAAGTACGGCAATACTCATATGTTAAGAA 6 19308299 0.948809333 3 5 26 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2R:19308283-19308315 8 EndoB FBtr0086559|FBtr0086558|FBtr0113098|FBtr0113097 19307445|19307445|19307445|19307445 19308386|19308386|19308386|19308386 AATACTCA 8mer-A1 dme-miR-12-5p 2R - 19308232 19308312 3'utr EndoB FlyBase G18923.1 CCAAGTACGGCAATACTCATATGTTAAGAAAGCAGACACGATCGAGAGAAGGGAACGGCAATTGGACAATTAAAGGATGCG 11 19308290 0.940412771 5 11 44 1 1.113943352 0.076923077 0.181818182 0.307692308 11 0 0 13 2R:19308232-19308312 8 6.5 1399 FBgn0034433 435.3966667 24.15666667 36.94666667 0.014928915 0.269076859 0.175929267 -2 -11 -6.5 0.1 dme-miR-11-3p 7mer-m1 TGTGATG 2R 19392219 19392225 - 2R_19392219_19392225_- 0.610867452 0.611559382 0.611213417 0.000489247 SdhA FBtr0086553|FBtr0086552|FBtr0086554 19391861|19391861|19391861 19392398|19392398|19392398 2R - 19392214 19392246 3'utr SdhA FlyBase G25033.1 CGGCAGCGGTTCCGGGCATTTTGTGATGAAACG 8 19392226 0.6701727 2 8 54 1 0.903089987 0.25 0 0 8 0 0 8 2R:19392214-19392246 7 SdhA FBtr0086553|FBtr0086552|FBtr0086554 19391861|19391861|19391861 19392398|19392398|19392398 TGTGATG 7mer-m1 dme-miR-11-3p 2R - 19392214 19392242 3'utr SdhA FlyBase G18934.1 AGCGGTTCCGGGCATTTTGTGATGAAACG 6 19392227 0.698667055 3 6 39 1 0.77815125 0.166666667 0 0 6 0 0 6 2R:19392214-19392242 7 7 1400 FBgn0261439 831.86 37.47666667 57.27666667 0.008414878 0.186782887 0.122213816 1 2 1.5 0.1 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 2R 19430692 19430697 - 2R_19430692_19430697_- 0.888683669 0.820089067 0.854386368 0.048503707 Fak FBtr0301883|FBtr0086542|FBtr0301882|FBtr0114605|FBtr0086543|FBtr0086544 19430657|19430657|19430657|19430657|19430657|19430657 19431105|19431105|19431105|19431105|19431105|19431105 2R - 19430669 19430712 3'utr Fak FlyBase G25076.1 CGAAGCTAATTATTTTGGTGCAAGGTTCAATCACAAAAAATAAA 6 19430698 0.986234677 4 6 48 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 2R:19430669-19430712 6 Fak FBtr0086543|FBtr0086544|FBtr0301882|FBtr0114605|FBtr0301883|FBtr0086542 19430657|19430657|19430657|19430657|19430657|19430657 19431105|19431105|19431105|19431105|19431105|19431105 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 2R - 19430676 19430713 3'utr Fak FlyBase G18957.1 TCGAAGCTAATTATTTTGGTGCAAGGTTCAATCACAAA 7 19430697 0.801824257 2 7 60 1 1 0.2 0.428571429 0.6 7 0 0 10 2R:19430676-19430713 6 6 1401 FBgn0020440 860.4633333 21.11 32.3 0.006972987 0.284225486 0.185758514 1 0 0.5 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 2R 19430739 19430745 - 2R_19430739_19430745_- 0.521223855 0.521223855 0.521223855 0 Fak FBtr0301883|FBtr0086542|FBtr0301882|FBtr0114605|FBtr0086543|FBtr0086544 19430657|19430657|19430657|19430657|19430657|19430657 19431105|19431105|19431105|19431105|19431105|19431105 2R - 19430726 19430783 3'utr Fak FlyBase G25077.1 TTCATCATCAATTCGGGTGTGTTTTAAGACATTTATATTGTGATTTATAGTTTACCAT 28 19430746 0.714967241 10 27 306 0.971428571 1.531478917 0.171428571 0.214285714 0.371428571 28 1 0 34 2R:19430726-19430783 7 Fak FBtr0086543|FBtr0086544|FBtr0301882|FBtr0114605|FBtr0301883|FBtr0086542 19430657|19430657|19430657|19430657|19430657|19430657 19431105|19431105|19431105|19431105|19431105|19431105 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 19430718 19430758 3'utr Fak FlyBase G18958.1 AAGACATTTATATTGTGATTTATAGTTTACCATTATAGGCT 20 19430747 0.587276912 8 18 239 0.923076923 1.079181246 0.230769231 0.2 0.384615385 20 1 1 24 2R:19430718-19430758 7 22.5 1402 FBgn0020440 860.4633333 21.11 32.3 0.026148703 1.065845571 0.696594427 1 2 1.5 0.1 dme-miR-2b-2-5p 7mer-m8 TTGAAGA 2R 19430842 19430848 - 2R_19430842_19430848_- 0.631525999 0.630666272 0.631096136 0.0006079 Fak FBtr0301883|FBtr0086542|FBtr0301882|FBtr0114605|FBtr0086543|FBtr0086544 19430657|19430657|19430657|19430657|19430657|19430657 19431105|19431105|19431105|19431105|19431105|19431105 2R - 19430797 19430924 3'utr Fak FlyBase G25078.1 GACCCCAACTCGGCCGGCCGCATTCTCACATCGTCATGTAGTCAAAATAATTTAAGAAACAAAGACACGTTTTTGATTGAAGATGGCTAGTAATAGTAATTTATAGATAATCTACTCGATCTAATACA 28 19430841 0.98434722 14 25 200 0.9375 1.176091259 0.28125 0.142857143 0.25 28 1 1 30 2R:19430797-19430924 7 Fak FBtr0086543|FBtr0086544|FBtr0301882|FBtr0114605|FBtr0301883|FBtr0086542 19430657|19430657|19430657|19430657|19430657|19430657 19431105|19431105|19431105|19431105|19431105|19431105 TTGAAGA 7mer-m8 dme-miR-2b-2-5p 2R - 19430794 19430935 3'utr Fak FlyBase G18959.1 AAGTTTGACGAGACCCCAACTCGGCCGGCCGCATTCTCACATCGTCATGTAGTCAAAATAATTTAAGAAACAAAGACACGTTTTTGATTGAAGATGGCTAGTAATAGTAATTTATAGATAATCTACTCGATCTAATACAACT 22 19430842 0.98157243 15 21 109 0.973684211 1.568201724 0.315789474 0.545454545 0.736842105 22 1 0 37 2R:19430794-19430935 7 9.5 1403 FBgn0020440 860.4633333 21.11 32.3 0.011040563 0.450023685 0.294117647 -7 -6 -6.5 0.1 dme-miR-305-3p 6mer3-8 ATGTGC 2R 19482264 19482269 + 2R_19482264_19482269_+ 0.999933866 0.897190656 0.948562261 0.072650413 par-1 FBtr0100390|FBtr0301506|FBtr0086457|FBtr0301505 19481162|19481162|19481162|19481162 19482575|19482575|19482575|19482575 2R + 19482252 19482292 3'utr par-1 FlyBase G17628.1 CCCAGAAGCCAGATGTGCAGCGTATCTAGTAATTAAGCATA 12 19482266 0.979182934 2 10 73 0.785714286 0.740362689 0 0.166666667 0.285714286 12 2 1 11 2R:19482252-19482292 6 par-1 FBtr0301505|FBtr0301506|FBtr0100390|FBtr0086457 19481162|19481162|19481162|19481162 19482575|19482575|19482575|19482575 ATGTGC 6mer3-8 dme-miR-305-3p 2R + 19482238 19482290 3'utr par-1 FlyBase G13422.1 GCAATTCATAATCACCCAGAAGCCAGATGTGCAGCGTATCTAGTAATTAAGCA 7 19482265 0.960201912 3 6 33 1 1.146128036 0.071428571 0.571428571 0.785714286 7 0 0 14 2R:19482238-19482290 6 8.5 1404 FBgn0260934 5641.8 137.7133333 211.53 0.001506611 0.061722419 0.040183426 -2 -1 -1.5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 19483412 19483417 + 2R_19483412_19483417_+ 0.98845085 0.995868687 0.992159768 0.005245247 par-1 FBtr0301503|FBtr0086450|FBtr0330244 19483406|19483406|19483406 19484473|19484473|19485686 2R + 19483380 19483416 stop_codon par-1 FlyBase G17632.1 GCGCATTGCTTTTGACCTCAAGCTGTGACTTAACCAA 8 19483409 0.805572456 3 7 52 0.9 0.954242509 0 0.125 0.3 8 1 0 9 2R:19483380-19483416 5 par-1 FBtr0086450|FBtr0301503|FBtr0330244 19483406|19483406|19483406 19484473|19484473|19485686 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 19483375 19483454 stop_codon par-1 FlyBase G13423.1 GCGTCGCGCATTGCTTTTGACCTCAAGCTGTGACTTAACCAAACGAACAACGAGGGGAATGCGGCCGCCACCGCCTCGCG 8 19483409 0.955974238 5 7 38 1 0.954242509 0.333333333 0.125 0.222222222 8 0 0 9 2R:19483375-19483454 6 5 1405 FBgn0260934 5641.8 137.7133333 211.53 0.000886242 0.036307305 0.023637309 3 3 3 0.1 dme-miR-33-5p 6mer3-8 CAATGC 2R 19484165 19484170 + 2R_19484165_19484170_+ 0.984629973 0.999998073 0.992314023 0.010866888 par-1 FBtr0301503|FBtr0086450|FBtr0330244|FBtr0330245 19483406|19483406|19483406|19484102 19484473|19484473|19485686|19484473 2R + 19484158 19484198 3'utr par-1 FlyBase G17635.1 ATGAAGGCAATGCGGCGAATACCCTGCTGGAATCTCAAGAA 14 19484184 0.728821813 4 10 57 0.6875 1.041392685 0.3125 0.142857143 0.25 14 5 0 11 2R:19484158-19484198 6 par-1 FBtr0330245|FBtr0086450|FBtr0301503|FBtr0330244 19484102|19483406|19483406|19483406 19484473|19484473|19484473|19485686 CAATGC 6mer3-8 dme-miR-33-5p 2R + 19484162 19484215 3'utr par-1 FlyBase G13424.1 AGGCAATGCGGCGAATACCCTGCTGGAATCTCAAGAAATAATTAATGTTAGCAT 11 19484178 0.725549951 7 10 51 0.909090909 1 0.181818182 0 0 11 1 0 10 2R:19484162-19484215 6 7 1406 FBgn0260934 5641.8 137.7133333 211.53 0.001240739 0.050830227 0.033092233 -19 -13 -16 0.1 dme-miR-980-3p 6mer2-7 GCAGCT 2R 19484384 19484389 + 2R_19484384_19484389_+ 0.956145993 0.901953414 0.929049704 0.038319955 par-1 FBtr0301503|FBtr0086450|FBtr0330244|FBtr0330245 19483406|19483406|19483406|19484102 19484473|19484473|19485686|19484473 2R + 19484369 19484403 3'utr par-1 FlyBase G17636.1 AATATATGTCATCGCGCAGCTTGCAAGATGGAACA 13 19484389 0.755320292 4 10 55 0.882352941 1.176091259 0.529411765 0.230769231 0.411764706 13 2 0 15 2R:19484369-19484403 6 par-1 FBtr0330245|FBtr0086450|FBtr0301503|FBtr0330244 19484102|19483406|19483406|19483406 19484473|19484473|19484473|19485686 GCAGCT 6mer2-7 dme-miR-980-3p 2R + 19484374 19484438 3'utr par-1 FlyBase G13426.1 ATGTCATCGCGCAGCTTGCAAGATGGAACAGAAGTGAATATATAAGGGTAACAAACACACCACTC 14 19484390 0.949737284 4 13 58 0.909090909 0.823908741 0.363636364 0.5 0.681818182 14 0 2 20 2R:19484374-19484438 6 10.5 1407 FBgn0260934 5641.8 137.7133333 211.53 0.001861108 0.076245341 0.049638349 -5 -6 -5.5 0.1 dme-miR-307a-3p 6mer2-7 GTTGTG 2R 19485063 19485068 + 2R_19485063_19485068_+ 0.527289387 0.522219019 0.524754203 0.003585314 par-1 FBtr0330244 19483406 19485686 2R + 19484995 19485139 3'utr par-1 FlyBase G17637.1 AAAACATACCTTAGGGAGGAGCGATCTCAAGTGAGATGTAGAAAAGAAAAAGACGACCATTTATCTAAGTTGTGGAGGCTCAAAAAACAGTCTATATATATATACCAAAACATATACAAAGTTGCACATCAAGTTGTCTTCATCA 114 19485067 0.80210614 11 113 519 1 2.139879086 0.028985507 0.192982456 0.333333333 114 0 0 138 2R:19484995-19485139 6 par-1 FBtr0330244 19483406 19485686 GTTGTG 6mer2-7 dme-miR-307a-3p 2R + 19485042 19485109 3'utr par-1 FlyBase G13427.2 AAAAGACGACCATTTATCTAAGTTGTGGAGGCTCAAAAAACAGTCTATATATATATACCAAAACATAT 100 19485067 0.950925639 3 99 431 0.992907801 2.146128036 0 0.33 0.524822695 100 1 0 140 2R:19485042-19485109 6 96.5 1408 FBgn0260934 5641.8 137.7133333 211.53 0.01710447 0.700730987 0.456200066 -4 -4 -4 0.1 dme-miR-317-3p 6mer2-7 GTGTTC 2R 19485562 19485567 - 2R_19485562_19485567_- 0.999991956 0.999993438 0.999992697 9.90E-07 TBCB FBtr0086502 19485492 19485802 2R - 19485554 19485603 3'utr TBCB FlyBase G25102.1 AATTCTATAATCGGCTTTATCATAACTGATTTAATGGTGTTCTCAATCAT 36 19485569 0.786405796 8 36 360 1 1.612783857 0.170731707 0.083333333 0.195121951 36 0 0 41 2R:19485554-19485603 6 TBCB FBtr0086502 19485492 19485802 GTGTTC 6mer2-7 dme-miR-317-3p 2R - 19485554 19485606 3'utr TBCB FlyBase G18982.1 GTAAATTCTATAATCGGCTTTATCATAACTGATTTAATGGTGTTCTCAATCAT 21 19485569 0.80556756 6 20 206 0.965517241 1.447158031 0.206896552 0.285714286 0.482758621 21 1 0 28 2R:19485554-19485606 6 24 1409 FBgn0034451 695.71 73.74666667 112.8533333 0.034497132 0.325438438 0.212665406 2 2 2 0.1 dme-miR-283-5p 6mer3-8 TGATAT 2R 19485631 19485636 + 2R_19485631_19485636_+ 0.999987925 0.999999207 0.999993566 7.99E-06 par-1 FBtr0330244 19483406 19485686 2R + 19485611 19485671 3'utr par-1 FlyBase G17639.1 AATCATGTTGTAAGAATATCTGATATACATACATACATAGATGTTTTAATTAATAAATAAA 5 19485634 0.96577454 3 5 37 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 2R:19485611-19485671 6 par-1 FBtr0330244 19483406 19485686 TGATAT 6mer3-8 dme-miR-283-5p 2R + 19485607 19485647 3'utr par-1 FlyBase G13429.1 GAATAATCATGTTGTAAGAATATCTGATATACATACATACA 12 19485634 0.756985156 5 12 79 1 1.301029996 0.1 0.583333333 0.75 12 0 0 20 2R:19485607-19485647 6 7 1410 FBgn0260934 5641.8 137.7133333 211.53 0.001240739 0.050830227 0.033092233 -3 -3 -3 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2R 19485734 19485739 - 2R_19485734_19485739_- 0.999992835 0.999998683 0.999995759 4.17E-06 TBCB FBtr0086502 19485492 19485802 2R - 19485648 19485785 3'utr TBCB FlyBase G25103.1 ACACACAGGTCACACAATCTCGCATCGCACATGCCACCTTAAACAGAAGACTTACGAACCGCTAAAACTATTTGTACGCATGAAAGAACATTACAAATTATAGTTATGCCATTTTTTATTTATTAATTAAAACATCTA 65 19485747 0.970363389 19 52 310 0.825 1.120573931 0.0875 0.215384615 0.3625 65 10 4 66 2R:19485648-19485785 6 TBCB FBtr0086502 19485492 19485802 AAGACT 6mer3-8 dme-miR-14-3p 2R - 19485700 19485782 3'utr TBCB FlyBase G18983.1 CACAGGTCACACAATCTCGCATCGCACATGCCACCTTAAACAGAAGACTTACGAACCGCTAAAACTATTTGTACGCATGAAAG 27 19485747 0.948789915 6 24 103 0.902439024 1.568201724 0.024390244 0.37037037 0.585365854 27 4 0 37 2R:19485700-19485782 6 25 1411 FBgn0034451 695.71 73.74666667 112.8533333 0.035934513 0.338998373 0.221526465 8 8 8 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 2R 19494075 19494081 + 2R_19494075_19494081_+ 0.618390028 0.620203524 0.619296776 0.001282338 Rep FBtr0086462 19493874 19494125 2R + 19494052 19494090 3'utr Rep FlyBase G17649.1 ATGTTTAAATGTGAGTGTTTCTGTGCATTTTGCTTTGAT 9 19494081 0.966513053 5 9 88 1 1.041392685 0.272727273 0.111111111 0.272727273 9 0 0 11 2R:19494052-19494090 7 Rep FBtr0086462 19493874 19494125 TGCATTT 7mer-m8 dme-miR-277-3p 2R + 19494053 19494093 3'utr Rep FlyBase G13436.1 TGTTTAAATGTGAGTGTTTCTGTGCATTTTGCTTTGATAAA 5 19494069 0.974675023 5 5 57 1 0.903089987 0.125 0.4 0.625 5 0 0 8 2R:19494053-19494093 7 6 1412 FBgn0026378 268.7033333 16.93666667 25.81 0.022329459 0.354260972 0.232468036 -6 6 0 0.1 dme-bantam-3p 6mer3-8 TGATCT 2R 19494350 19494355 - 2R_19494350_19494355_- 0.999889247 0.999920314 0.99990478 2.20E-05 hpo FBtr0331920|FBtr0086500 19493994|19494295 19494681|19494681 2R - 19494323 19494379 3'utr hpo FlyBase G25107.1 GGTTTCTTATATCCTAGCTTTCATTGATCTGTCTTTTAATATAAATAGGTATGCTCG 169 19494355 0.809692525 8 161 2042 0.958549223 1.790050474 0.015544041 0.130177515 0.238341969 169 6 2 185 2R:19494323-19494379 6 hpo FBtr0331920|FBtr0086500 19493994|19494295 19494681|19494681 TGATCT 6mer3-8 dme-bantam-3p 2R - 19494327 19494380 3'utr hpo FlyBase G18987.1 TGGTTTCTTATATCCTAGCTTTCATTGATCTGTCTTTTAATATAAATAGGTATG 85 19494355 0.779552891 12 79 990 0.93495935 1.759667845 0.024390244 0.317647059 0.528455285 85 7 1 115 2R:19494327-19494380 6 125 1413 FBgn0261456 615.7733333 26.58 40.65333333 0.202996774 4.702784048 3.074778616 0 0 0 0.1 dme-miR-263a-5p 7mer-m8 GTGCCAT 2R 19504023 19504029 + 2R_19504023_19504029_+ 0.657984219 0.658496482 0.658240351 0.000362251 CG11007 FBtr0086464|FBtr0345929 19504002|19504002 19504268|19504594 2R + 19504010 19504066 3'utr CG11007 FlyBase G17652.1 CTGTCCACCACTGGTGCCATCTCATTTCTGCGTGCACGTGCTAATAACTGTTATTCG 11 19504022 0.965188487 9 10 79 0.923076923 1.079181246 0.153846154 0.090909091 0.230769231 11 1 0 12 2R:19504010-19504066 7 CG11007 FBtr0345929|FBtr0086464 19504002|19504002 19504594|19504268 GTGCCAT 7mer-m8 dme-miR-263a-5p 2R + 19504009 19504057 3'utr CG11007 FlyBase G13437.1 CCTGTCCACCACTGGTGCCATCTCATTTCTGCGTGCACGTGCTAATAAC 5 19504035 0.98888547 4 4 33 0.833333333 0.698970004 0.166666667 0.2 0.333333333 5 1 0 5 2R:19504009-19504057 7 3 1414 FBgn0034455 282.3433333 27.99666667 42.39333333 0.010625362 0.107155614 0.070765844 1 -12 -5.5 0.1 dme-miR-8-3p 7mer-m8 CAGTATT 2R 19665393 19665399 - 2R_19665393_19665399_- 0.661612303 0.661615219 0.661613761 2.05E-06 hrg FBtr0111010 19665258 19666023 2R - 19665347 19665419 3'utr hrg FlyBase G25135.1 ACTTTTACGTATTCTATAACCAGTATTCCGCCAATGTGGAAACAATCTAACAAAAACATACCTCTAATTTTTT 13 19665394 0.983287683 8 12 92 0.9375 1.176091259 0 0.230769231 0.375 13 1 0 15 2R:19665347-19665419 7 hrg FBtr0111010 19665258 19666023 CAGTATT 7mer-m8 dme-miR-8-3p 2R - 19665337 19665403 3'utr hrg FlyBase G19008.1 TAACCAGTATTCCGCCAATGTGGAAACAATCTAACAAAAACATACCTCTAATTTTTTAAGTTTTAAA 6 19665385 0.95826897 4 6 33 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 2R:19665337-19665403 7 7.5 1415 FBgn0015949 2895.236667 92.73333333 142.2466667 0.002590462 0.080877067 0.052725313 -5 -14 -9.5 0.1 dme-miR-14-3p 6mer2-7 AGACTG 2R 19665450 19665455 - 2R_19665450_19665455_- 0.991640645 0.991388176 0.99151441 0.000178474 hrg FBtr0111010 19665258 19666023 2R - 19665429 19665505 3'utr hrg FlyBase G25136.1 TTCCTCGTTATCGTACTCTCTTTTCATTTTCCCCAACTTCCTTTGACACGAGACTGTTTCTGTACTCTTAAGTTGCC 144 19665448 0.672721724 18 137 1319 0.949438202 1.625826713 0.02247191 0.201388889 0.353932584 144 6 3 169 2R:19665429-19665505 6 hrg FBtr0111010 19665258 19666023 AGACTG 6mer2-7 dme-miR-14-3p 2R - 19665414 19665509 3'utr hrg FlyBase G19009.1 GTTTTTCCTCGTTATCGTACTCTCTTTTCATTTTCCCCAACTTCCTTTGACACGAGACTGTTTCTGTACTCTTAAGTTGCCTATCTACTTACTTTT 95 19665448 0.984980435 16 89 887 0.944055944 1.653212514 0.041958042 0.410526316 0.608391608 95 6 2 135 2R:19665414-19665509 6 104.5 1416 FBgn0015949 2895.236667 92.73333333 142.2466667 0.036093768 1.126887132 0.734639359 -7 -7 -7 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA 2R 19665677 19665682 - 2R_19665677_19665682_- 0.976360598 0.977411884 0.976886241 0.000743381 hrg FBtr0086484|FBtr0086483|FBtr0111010 19663917|19663917|19665258 19666023|19666023|19666023 2R - 19665634 19665726 3'utr hrg FlyBase G25138.1 AACGGCGGTGGCGGCGGCAGCCACTACAACAAAACGTACTACATTGATGATGATGACGAGGACAACAATCAACCACTTTTGACACCTAACAAC 48 19665683 0.718161014 8 47 240 0.980769231 1.707570176 0.057692308 0.083333333 0.153846154 48 1 0 51 2R:19665634-19665726 6 hrg FBtr0111010|FBtr0086484|FBtr0086483 19665258|19663917|19663917 19666023|19666023|19666023 TGATGA 6mer3-8 dme-miR-2a-2-5p 2R - 19665659 19665702 3'utr hrg FlyBase G19010.1 TACAACAAAACGTACTACATTGATGATGATGACGAGGACAACAA 14 19665683 0.956381414 4 14 69 1 1.397940009 0.08 0.642857143 0.8 14 0 0 25 2R:19665659-19665702 6 28 1417 FBgn0015949 2895.236667 92.73333333 142.2466667 0.009671057 0.30194105 0.196841168 1 1 1 0.1 dme-miR-79-3p 6mer3-8 TAGCTT 2R 19672899 19672904 + 2R_19672899_19672904_+ 0.999920667 0.999999977 0.999960322 5.61E-05 isopeptidase-T-3 FBtr0330247|FBtr0086473|FBtr0086474 19672808|19672808|19672808 19673477|19673477|19673175 2R + 19672875 19672918 3'utr isopeptidase-T-3 FlyBase G17657.1 TCACACACCCGAAGTGCATGGCTGTAGCTTGGTCCATTTTGGGG 9 19672893 0.977757846 3 8 58 0.909090909 1 0.272727273 0.222222222 0.363636364 9 1 0 10 2R:19672875-19672918 6 isopeptidase-T-3 FBtr0330247|FBtr0086473|FBtr0086474 19672808|19672808|19672808 19673477|19673477|19673175 TAGCTT 6mer3-8 dme-miR-79-3p 2R + 19672873 19672910 3'utr isopeptidase-T-3 FlyBase G13442.1 AATCACACACCCGAAGTGCATGGCTGTAGCTTGGTCCA 6 19672893 0.962992376 3 6 29 1 1.041392685 0.272727273 0.5 0.727272727 6 0 0 11 2R:19672873-19672910 6 7.5 1418 FBgn0028372 205.4433333 10.11 15.41666667 0.036506417 0.741839763 0.486486486 6 6 6 0.1 dme-miR-1006-3p 6mer3-8 CGAATT 2R 19673064 19673069 + 2R_19673064_19673069_+ 0.507150574 0.505498611 0.506324593 0.00116814 isopeptidase-T-3 FBtr0330247|FBtr0086473|FBtr0086474 19672808|19672808|19672808 19673477|19673477|19673175 2R + 19673022 19673090 3'utr isopeptidase-T-3 FlyBase G17658.1 AAGAGCACGCGGCTGCACTCTACAAACGCTTACCGATCAGTACGAATTGCATTTTATACATACATATAC 70 19673058 0.938364935 6 68 371 0.967032967 1.944482672 0.241758242 0.257142857 0.428571429 70 3 0 88 2R:19673022-19673090 6 isopeptidase-T-3 FBtr0330247|FBtr0086473|FBtr0086474 19672808|19672808|19672808 19673477|19673477|19673175 CGAATT 6mer3-8 dme-miR-1006-3p 2R + 19673024 19673079 3'utr isopeptidase-T-3 FlyBase G13443.1 GAGCACGCGGCTGCACTCTACAAACGCTTACCGATCAGTACGAATTGCATTTTATA 30 19673058 0.96641962 4 29 152 0.978723404 1.361727836 0.340425532 0.3 0.553191489 30 0 1 46 2R:19673024-19673079 6 46.5 1419 FBgn0028372 205.4433333 10.11 15.41666667 0.226339786 4.599406528 3.016216216 6 6 6 0.1 dme-miR-12-5p 7mer-A1 ATACTCA 2R 20261272 20261278 + 2R_20261272_20261278_+ 0.823349544 0.823349504 0.823349524 0 Hsl FBtr0086270|FBtr0086271|FBtr0086272 20260958|20260958|20260958 20261726|20261726|20261726 2R + 20261240 20261354 3'utr Hsl FlyBase G17690.1 AATTTTATATGACACAGCTTTCTATGTTTTATATACTCACAAACTAAGTATAGGATACGTATGTATGTAGCTTCTAGCATAAGCAAGCCAAGTATGCAAGTATTGGAAGCGTGTA 33 20261267 0.895440853 15 32 291 0.976744186 1.62324929 0.139534884 0.272727273 0.441860465 33 1 0 42 2R:20261240-20261354 7 Hsl FBtr0086272|FBtr0086270|FBtr0086271 20260958|20260958|20260958 20261726|20261726|20261726 ATACTCA 7mer-A1 dme-miR-12-5p 2R + 20261244 20261284 3'utr Hsl FlyBase G13466.2 TTATATGACACAGCTTTCTATGTTTTATATACTCACAAACT 9 20261266 0.635329449 7 8 87 0.928571429 1.113943352 0.071428571 0.444444444 0.642857143 9 1 0 13 2R:20261244-20261284 7 9 1420 FBgn0034491 654.3266667 22.12333333 33.89333333 0.013754598 0.406810306 0.265538946 5 6 5.5 0.1 dme-miR-305-3p 7mer-m8 ATGTGCC 2R 20261451 20261457 + 2R_20261451_20261457_+ 0.460664156 0.674502178 0.567583167 0.1512063 Hsl FBtr0086270|FBtr0086271|FBtr0086272 20260958|20260958|20260958 20261726|20261726|20261726 2R + 20261386 20261644 3'utr Hsl FlyBase G17691.1 ACGATTAATGCTCTTGAATGCAGGCACACACTCGCTTAAAGCTCTTTGTTGCAAAACTCCCGACTATGTGCCTCATACGGAACGAGTACTTATACACAGTGAATAGAATAATCGCCCATTATTACCCTTGATTTAGAACTCCCCAATGGTATGTCCAGATTTTCTGCAGCTGCGGAGGCTAACAAACTTCAATGTCGGAGATATGCCAAGGTTTTTTGTCTATCCCACGCCAAGGTGTTTGATAAACCACTACTCTTAA 64 20261452 0.813340494 29 59 388 0.935064935 1.380211242 0.233766234 0.125 0.272727273 64 3 2 72 2R:20261386-20261644 7 Hsl FBtr0086272|FBtr0086270|FBtr0086271 20260958|20260958|20260958 20261726|20261726|20261726 ATGTGCC 7mer-m8 dme-miR-305-3p 2R + 20261424 20261460 3'utr Hsl FlyBase G13469.1 AAGCTCTTTGTTGCAAAACTCCCGACTATGTGCCTCA 5 20261452 0.884878499 2 5 28 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2R:20261424-20261460 7 7 1421 FBgn0034491 654.3266667 22.12333333 33.89333333 0.01069802 0.316408016 0.206530291 -1 -1 -1 0.1 dme-miR-980-3p 6mer2-7 GCAGCT 2R 20261551 20261556 + 2R_20261551_20261556_+ 0.999999976 0.999999988 0.999999982 0 Hsl FBtr0086270|FBtr0086271|FBtr0086272 20260958|20260958|20260958 20261726|20261726|20261726 2R + 20261386 20261644 3'utr Hsl FlyBase G17691.1 ACGATTAATGCTCTTGAATGCAGGCACACACTCGCTTAAAGCTCTTTGTTGCAAAACTCCCGACTATGTGCCTCATACGGAACGAGTACTTATACACAGTGAATAGAATAATCGCCCATTATTACCCTTGATTTAGAACTCCCCAATGGTATGTCCAGATTTTCTGCAGCTGCGGAGGCTAACAAACTTCAATGTCGGAGATATGCCAAGGTTTTTTGTCTATCCCACGCCAAGGTGTTTGATAAACCACTACTCTTAA 64 20261549 0.813340494 29 59 388 0.935064935 1.380211242 0.233766234 0.125 0.272727273 64 3 2 72 2R:20261386-20261644 6 Hsl FBtr0086272|FBtr0086270|FBtr0086271 20260958|20260958|20260958 20261726|20261726|20261726 GCAGCT 6mer2-7 dme-miR-980-3p 2R + 20261479 20261573 3'utr Hsl FlyBase G13470.1 ACACAGTGAATAGAATAATCGCCCATTATTACCCTTGATTTAGAACTCCCCAATGGTATGTCCAGATTTTCTGCAGCTGCGGAGGCTAACAAACT 23 20261532 0.977059728 9 22 143 0.967741935 1.477121255 0.258064516 0.260869565 0.451612903 23 1 0 30 2R:20261479-20261573 6 13.5 1422 FBgn0034491 654.3266667 22.12333333 33.89333333 0.020631896 0.610215459 0.398308419 2 19 10.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 20270862 20270867 + 2R_20270862_20270867_+ 0.985979748 0.99992641 0.992953079 0.009861806 CG8908 FBtr0339542|FBtr0339542|FBtr0339542 20270784|20270784|20270784 20270994|20270994|20270994 2R + 20270836 20270881 3'utr CG8908 FlyBase G17697.1 AACCCTTATCGTATCAGCGAAACTATCTGTGAAAGCTTTGCTTCCG 10 20270861 0.983664445 3 9 73 0.818181818 0.954242509 0.181818182 0.1 0.181818182 10 2 0 9 2R:20270836-20270881 6 CG8908 FBtr0339542|FBtr0339542|FBtr0339542 20270784|20270784|20270784 20270994|20270994|20270994 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 20270851 20270875 3'utr CG8908 FlyBase G13478.1 AGCGAAACTATCTGTGAAAGCTTTG 5 20270861 0.873066299 2 4 22 0.666666667 0.602059991 0.5 0.2 0.333333333 5 2 0 4 2R:20270851-20270875 6 7.5 1423 FBgn0034493 153.9366667 3.596666667 5.44 0.048721336 2.085264133 1.378676471 1 1 1 0.1 dme-miR-12-5p 6mer2-7 ATACTC 2R 20270957 20270962 + 2R_20270957_20270962_+ 0.999995123 0.99971088 0.999853002 0.00020096 CG8908 FBtr0339542 20270784 20270994 2R + 20270937 20270975 3'utr CG8908 FlyBase G17698.1 AATCATCAGTCGCCAAATTGATACTCTTATATGTAAATC 17 20270955 0.838425112 2 16 148 0.944444444 1.230448921 0 0.058823529 0.111111111 17 1 0 17 2R:20270937-20270975 6 CG8908 FBtr0339542 20270784 20270994 ATACTC 6mer2-7 dme-miR-12-5p 2R + 20270944 20270974 3'utr CG8908 FlyBase G13479.1 AGTCGCCAAATTGATACTCTTATATGTAAAT 14 20270955 0.707905213 4 13 100 0.913043478 1.322219295 0.043478261 0.357142857 0.608695652 14 2 0 21 2R:20270944-20270974 6 15.5 1424 FBgn0034493 153.9366667 3.596666667 5.44 0.10069076 4.309545876 2.849264706 2 2 2 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 2R 20271812 20271817 - 2R_20271812_20271817_- 0.607534872 0.999708105 0.803621488 0.277308329 CG10444 FBtr0086305|FBtr0086305 20271651|20271651 20272417|20272417 2R - 20271751 20272207 3'utr CG10444 FlyBase G25199.1 TTATTAGTCGTGTTGCAAATGTTCACAAGCGCATCATTAAGAGGCCTCTTAAGAATAGTCAAATGTTTTTTACAAGAACGTATCAAAAGTAGGAGTCTACCTCAATGAACTTTTACAGAGGGACAATAATCAATTTGGAGCCTAAAAGCGAGTTGGCCGACTACTTTCCCATGTTGAGCATTGGCAGCCACAATGCCCCACATAAATTATTGATTTAGTAGTACATCTAATTTTAATGGGATATTTATATTCATACCTCTTAGTTACTCGATATTTGCATACATAGATAACATAATAACATTACAATAATACACTACAGTGAGCACCGCCTATAAATAGTTACTACATGGCTCTTAAAGCATTACATTGCGCCACAGTGTGAATTCTGTTTACTTATATACCTCTACTATATGTACACAAATATACTATAGACTAATTATATACTCGTGTCGTGTCG 76 20271824 0.984333272 42 70 552 0.921348315 1.612783857 0.134831461 0.171052632 0.292134831 76 6 1 82 2R:20271751-20272207 6 CG10444 FBtr0086305|FBtr0086305 20271651|20271651 20272417|20272417 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 2R - 20271735 20271889 3'utr CG10444 FlyBase G19056.1 GTGAGCACCGCCTATAAATAGTTACTACATGGCTCTTAAAGCATTACATTGCGCCACAGTGTGAATTCTGTTTACTTATATACCTCTACTATATGTACACAAATATACTATAGACTAATTATATACTCGTGTCGTGTCGCAATCAACCATTGAAC 21 20271824 0.979099797 13 20 144 0.9 1.431363764 0.1 0.380952381 0.566666667 21 3 0 27 2R:20271735-20271889 6 5.5 1425 FBgn0034494 948.11 41.53333333 63.96 0.005801015 0.132423756 0.085991245 7 7 7 0.1 dme-miR-252-5p 7mer-m8 GTACTTA 2R 20281767 20281773 - 2R_20281767_20281773_- 0.58826798 0.588296581 0.588282281 2.02E-05 CG16868 FBtr0086302 20281627 20282149 2R - 20281714 20281800 3'utr CG16868 FlyBase G25216.1 TATTTGATAAGCACCAACAACAGAAATGTACTTACTTGTCTGATTGTAAGATACCATGTCGTATATCGTTTTTTGTAATAGCCCCTA 76 20281774 0.980514084 9 75 469 1 1.991226076 0.020408163 0.236842105 0.408163265 76 0 0 98 2R:20281714-20281800 7 CG16868 FBtr0086302 20281627 20282149 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 20281738 20281797 3'utr CG16868 FlyBase G19068.1 TTGATAAGCACCAACAACAGAAATGTACTTACTTGTCTGATTGTAAGATACCATGTCGTA 58 20281774 0.978303672 5 55 372 0.95 1.880813592 0.0125 0.25862069 0.4625 58 4 0 76 2R:20281738-20281797 7 63 1426 FBgn0034498 322.4366667 7.546666667 11.61333333 0.195387208 8.348056537 5.424799082 1 1 1 0.1 dme-miR-980-3p 6mer2-7 GCAGCT 2R 20309486 20309491 - 2R_20309486_20309491_- 0.999996971 0.657362256 0.828679613 0.24227932 CG13868 FBtr0086298|FBtr0301209 20309025|20308775 20309572|20309572 2R - 20309335 20309516 3'utr CG13868 FlyBase G25221.1 ACAGGCGATAAAAGACATTGACAACGCAGCTGCAACTTAGAGTTCCGAACCTATTTGAATACTTTGAATACTTTGTCCTTTCCACAGTAATATTCTTTTTAGTAGCATATAGGCACCTCTTACACCAGCACACACGATTCAAGTATATATTCAATTTAGTCTAGTATATATTTCAAAATATT 19 20309499 0.973044184 15 18 119 1 1.342422681 0.136363636 0.157894737 0.272727273 19 0 0 22 2R:20309335-20309516 6 CG13868 FBtr0301209|FBtr0086298 20308775|20309025 20309572|20309572 GCAGCT 6mer2-7 dme-miR-980-3p 2R - 20309460 20309508 3'utr CG13868 FlyBase G19073.1 TAAAAGACATTGACAACGCAGCTGCAACTTAGAGTTCCGAACCTATTTG 8 20309499 0.95516207 4 8 41 1 1.079181246 0.25 0.375 0.583333333 8 0 0 12 2R:20309460-20309508 6 6.5 1427 FBgn0034501 2191.81 83.72333333 128.32 0.002965586 0.07763666 0.050654613 8 8 8 0.1 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 2R 20324528 20324533 + 2R_20324528_20324533_+ 0.999999882 1 0.999999941 7.07E-08 CG8920 FBtr0086281|FBtr0301207 20324518|20324518 20324717|20324717 2R + 20324504 20324539 stop_codon CG8920 FlyBase G17711.1 AAACAACGACATCTGAATTGTGACTGGTGCCCTATA 59 20324522 0.612507206 6 58 386 0.987654321 1.903089987 0.12345679 0.322033898 0.50617284 59 1 0 80 2R:20324504-20324539 6 CG8920 FBtr0086281|FBtr0301207 20324518|20324518 20324717|20324717 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 2R + 20324504 20324549 stop_codon CG8920 FlyBase G13490.1 AAACAACGACATCTGAATTGTGACTGGTGCCCTATAAGTTTATATT 22 20324523 0.948628914 4 21 146 0.975 1.591064607 0.075 0.5 0.725 22 1 0 39 2R:20324504-20324549 6 40.5 1428 FBgn0027529 763.31 27.44 42.03333333 0.05305839 1.475947522 0.963521015 6 5 5.5 0.1 dme-miR-283-5p 6mer3-8 TGATAT 2R 20324615 20324620 + 2R_20324615_20324620_+ 0.999978825 0.999990456 0.999984641 8.27E-06 CG8920 FBtr0086281|FBtr0301207 20324518|20324518 20324717|20324717 2R + 20324598 20324635 3'utr CG8920 FlyBase G17712.1 ATAAACCGGAACTGACTTGATATGTTATTGCTAACACA 8 20324615 0.735816155 3 8 52 1 0.954242509 0.222222222 0.125 0.222222222 8 0 0 9 2R:20324598-20324635 6 CG8920 FBtr0086281|FBtr0301207 20324518|20324518 20324717|20324717 TGATAT 6mer3-8 dme-miR-283-5p 2R + 20324584 20324620 3'utr CG8920 FlyBase G13491.1 CTATAAGTGCTTCAATAAACCGGAACTGACTTGATAT 5 20324599 0.931782444 3 5 24 1 0.698970004 0 0 0 5 0 0 5 2R:20324584-20324620 6 6 1429 FBgn0027529 763.31 27.44 42.03333333 0.007860502 0.218658892 0.142743854 0 16 8 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 2R 20559469 20559475 - 2R_20559469_20559475_- 0.521223854 0.521223855 0.521223854 0 Mgat1 FBtr0086259 20559154 20560039 2R - 20559451 20559566 3'utr Mgat1 FlyBase G25232.2 TAGCAATGGTTAAGTTATAGTATGCAGCGTGTAATTTGTAGCATTTAAGTTGATCCAACTAGAGTTCTAACGGCAACGGACGTGTAATATTTGTGATTTTTGATTATTTAATTTAC 172 20559477 0.985210997 18 162 1872 0.95631068 1.817344971 0.427184466 0.162790698 0.300970874 172 7 2 197 2R:20559451-20559566 7 Mgat1 FBtr0086259 20559154 20560039 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 20559451 20559534 3'utr Mgat1 FlyBase G19081.1 AATTTGTAGCATTTAAGTTGATCCAACTAGAGTTCTAACGGCAACGGACGTGTAATATTTGTGATTTTTGATTATTTAATTTAC 118 20559477 0.975422873 14 111 1290 0.948571429 1.742986833 0.394285714 0.389830508 0.588571429 118 7 2 166 2R:20559451-20559534 7 129.5 1430 FBgn0034521 428.4 18.24333333 27.83333333 0.302287582 7.098483464 4.652694611 2 2 2 0.1 dme-miR-14-3p 8mer-A1 AAGACTGA 2R 20620888 20620895 + 2R_20620888_20620895_+ 0.643266014 0.643516415 0.643391214 0.00017706 CG9945 FBtr0086226|FBtr0086225 20620747|20620747 20620997|20621081 2R + 20620842 20620914 3'utr CG9945 FlyBase G17751.1 ATATTCACCACAGTCGGGCCGGCTGGGATAATTGGTTCTATTAAATAAGACTGAAGAATATGTCACTCACTTG 88 20620887 0.785108672 15 84 616 0.94 1.973127854 0.17 0.125 0.23 88 6 0 94 2R:20620842-20620914 8 CG9945 FBtr0086225 20620747 20621081 AAGACTGA 8mer-A1 dme-miR-14-3p 2R + 20620814 20620907 3'utr CG9945 FlyBase G13517.1 TAGTGGCTTGCCTAAGCGACGCACGAGAATATTCACCACAGTCGGGCCGGCTGGGATAATTGGTTCTATTAAATAAGACTGAAGAATATGTCAC 40 20620886 0.985662323 10 34 282 0.8125 1.414973348 0.140625 0.375 0.609375 40 11 1 52 2R:20620814-20620907 8 42.5 1431 FBgn0034527 339.9533333 21.37333333 32.82 0.125017159 1.988459139 1.294942108 1 2 1.5 0.1 dme-miR-932-5p 8mer-A1 GGAATTGA 2R 20634028 20634035 - 2R_20634028_20634035_- 0.674982804 0.674982804 0.674982804 0 rig FBtr0086252 20633874 20634190 2R - 20634009 20634053 3'utr rig FlyBase G25265.1 AATAGCCAGAAACTGTGTGGAATTGAAACCGATTTGAGTCGCCTT 11 20634037 0.895031137 4 8 48 0.923076923 1.079181246 0.307692308 0.181818182 0.307692308 11 1 0 12 2R:20634009-20634053 8 rig FBtr0086252 20633874 20634190 GGAATTGA 8mer-A1 dme-miR-932-5p 2R - 20634009 20634052 3'utr rig FlyBase G19107.1 ATAGCCAGAAACTGTGTGGAATTGAAACCGATTTGAGTCGCCTT 10 20634036 0.767282895 6 10 44 1 1.113943352 0 0.3 0.461538462 10 0 0 13 2R:20634009-20634052 8 9 1432 FBgn0250850 1237.703333 36.17666667 55.41333333 0.007271532 0.248779139 0.162415784 2 1 1.5 0.1 dme-miR-307a-3p 6mer2-7 GTTGTG 2R 20642498 20642503 + 2R_20642498_20642503_+ 0.424423607 0.96162932 0.693026463 0.379861793 CG11110 FBtr0086231 20642416 20642558 2R + 20642456 20642539 3'utr CG11110 FlyBase G17760.1 CCAATTGTGTACATACTGAACCGTATATTTTATAAACAATTTGTTGTGTTCCCGCATGCAAAGCAAAGTAGGATGTTCCAAAGT 9 20642499 0.969251538 9 9 53 1 1.079181246 0.083333333 0.333333333 0.5 9 0 0 12 2R:20642456-20642539 6 CG11110 FBtr0086231 20642416 20642558 GTTGTG 6mer2-7 dme-miR-307a-3p 2R + 20642477 20642539 3'utr CG11110 FlyBase G13523.1 CGTATATTTTATAAACAATTTGTTGTGTTCCCGCATGCAAAGCAAAGTAGGATGTTCCAAAGT 16 20642499 0.663061903 5 14 116 0.80952381 0.929418926 0.095238095 0.25 0.428571429 16 3 1 17 2R:20642477-20642539 6 8 1433 FBgn0034535 57.65333333 9.79 14.88666667 0.138760407 0.817160368 0.537393641 -1 -1 -1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 20662888 20662893 - 2R_20662888_20662893_- 1 1 1 0 Fem-1 FBtr0086246|FBtr0086246|FBtr0086246|FBtr0086245|FBtr0086245|FBtr0086245 20662472|20662472|20662472|20662472|20662472|20662472 20662931|20662931|20662931|20662931|20662931|20662931 2R - 20662868 20662946 stop_codon Fem-1 FlyBase G25284.1 AAGGTGCTGCCGTAGATAGTCAATGGCTTGAGCCGCAACTGAAGTAATTAGAACTGTGAATACAATAAGCCACGTTGGA 42 20662886 0.926851832 10 38 223 0.9 1.352182518 0.14 0.166666667 0.3 42 4 1 45 2R:20662868-20662946 6 Fem-1 FBtr0086245|FBtr0086245|FBtr0086245|FBtr0086246|FBtr0086246|FBtr0086246 20662472|20662472|20662472|20662472|20662472|20662472 20662931|20662931|20662931|20662931|20662931|20662931 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 20662875 20662942 stop_codon Fem-1 FlyBase G19121.1 TGCTGCCGTAGATAGTCAATGGCTTGAGCCGCAACTGAAGTAATTAGAACTGTGAATACAATAAGCCA 28 20662899 0.789405457 10 24 144 0.825 1.041392685 0.275 0.321428571 0.525 28 5 2 33 2R:20662875-20662942 6 27.5 1434 FBgn0034542 388.61 17.94666667 27.52666667 0.070765034 1.532317979 0.999031242 -7 6 -0.5 0.1 dme-miR-2b-2-5p 6mer2-7 TGAAGA 2R 20827604 20827609 - 2R_20827604_20827609_- 0.999999998 0.999997926 0.999998962 1.48E-06 sktl FBtr0071563 20827280 20827991 2R - 20827599 20827647 5'utr sktl FlyBase G25309.1 TTCTACTTGGTTGGAATTTGTTAGCGTGTTGCCTTAGCTGAAGATTTTG 15 20827614 0.686285335 7 14 122 0.944444444 0.929418926 0.166666667 0.133333333 0.277777778 15 0 1 17 2R:20827599-20827647 6 sktl FBtr0071563 20827280 20827991 TGAAGA 6mer2-7 dme-miR-2b-2-5p 2R - 20827553 20827628 5'utr sktl FlyBase G19138.1 GTTAGCGTGTTGCCTTAGCTGAAGATTTTGTTTTAATTTTTGAAATTATTGTGCTCGACAAGCGATGGGCTCAATC 8 20827614 0.979389517 5 7 54 1 1.146128036 0.357142857 0.375 0.642857143 8 0 0 14 2R:20827553-20827628 6 8 1435 FBgn0016984 2187.616667 79.33666667 122.04 0.003656948 0.100836099 0.065552278 5 5 5 0.1 dme-miR-34-5p 7mer-A1 ACTGCCA 2R 20827762 20827768 - 2R_20827762_20827768_- 0.820825031 0.821610501 0.821217766 0.000555432 sktl FBtr0071563 20827280 20827991 2R - 20827755 20827789 5'utr sktl FlyBase G25311.1 ATGTGGCGCCCGTGCTAATTGACTGCCAACTAGAC 12 20827771 0.738087096 2 12 68 1 1.079181246 0.416666667 0 0 12 0 0 12 2R:20827755-20827789 7 sktl FBtr0071563 20827280 20827991 ACTGCCA 7mer-A1 dme-miR-34-5p 2R - 20827748 20827796 5'utr sktl FlyBase G19139.1 GAAATTTATGTGGCGCCCGTGCTAATTGACTGCCAACTAGACACGCTAC 11 20827770 0.842636229 3 9 60 0.882352941 0.698970004 0.176470588 0.454545455 0.647058824 11 0 2 15 2R:20827748-20827796 7 11 1436 FBgn0016984 2187.616667 79.33666667 122.04 0.005028303 0.138649637 0.090134382 3 2 2.5 0.1 dme-miR-970-3p 7mer-m8 TCTTATG 2R 21006788 21006794 + 2R_21006788_21006794_+ 0.658996336 0.658998367 0.658997351 1.48E-06 CG10543 FBtr0071524|FBtr0332594 21006244|21006244 21007740|21007740 2R + 21006709 21006809 3'utr CG10543 FlyBase G17812.1 ATATGAAGCATATATATTAGGCTAAGCAACTATACAATAATGGCAGACAGACCACAACCACAAGCAACTTTCGAACAAATCTTATGCTTATTTAACATTTA 32 21006790 0.981538828 10 31 244 0.973684211 1.568201724 0.052631579 0.125 0.263157895 32 1 0 37 2R:21006709-21006809 7 CG10543 FBtr0332594|FBtr0071524 21006244|21006244 21007740|21007740 TCTTATG 7mer-m8 dme-miR-970-3p 2R + 21006764 21006833 3'utr CG10543 FlyBase G13554.1 AACCACAAGCAACTTTCGAACAAATCTTATGCTTATTTAACATTTACCATACGAGTTATGAACGCAACGC 11 21006790 0.984034172 6 11 90 1 1.322219295 0 0.636363636 0.80952381 11 0 0 21 2R:21006764-21006833 7 16 1437 FBgn0034570 1491.83 26.02 40.1 0.010725083 0.614911606 0.399002494 -2 -2 -2 0.1 dme-miR-190-5p 7mer-A1 CATATCA 2R 21007058 21007064 + 2R_21007058_21007064_+ 0.515898627 0.52025704 0.518077833 0.003081854 CG10543 FBtr0071524|FBtr0332594 21006244|21006244 21007740|21007740 2R + 21006902 21007181 3'utr CG10543 FlyBase G17813.1 CCGTACATACGATATCTATGTAAAGCTCGAGAGAGAGACGCCCAAGTTGTAGATGAGATGATTGATTTTAATCGCAAACAAATCGCATCACAAACGGAGACGAAAGATAGATAGAAAACAAAAGTACACGACGCTTTGACCACACAAAGTTGTAACCATATCATGAGGCCTCTTTCCCCGTATAATTAATTGTATTTTCGATAGTGCTTGTTATTTTCTATTTAGTTAACGAATTGATTATACTTACGAAGCCTTTCTGCTGATTACCGCCAGCCACACT 136 21007065 0.997362143 26 134 861 0.981707317 2.206825876 0.048780488 0.154411765 0.298780488 136 3 0 161 2R:21006902-21007181 7 CG10543 FBtr0332594|FBtr0071524 21006244|21006244 21007740|21007740 CATATCA 7mer-A1 dme-miR-190-5p 2R + 21006986 21007092 3'utr CG10543 FlyBase G13555.1 GCATCACAAACGGAGACGAAAGATAGATAGAAAACAAAAGTACACGACGCTTTGACCACACAAAGTTGTAACCATATCATGAGGCCTCTTTCCCCGTATAATTAATT 95 21007065 0.975566791 9 90 570 0.959183673 1.672097858 0.102040816 0.4 0.612244898 95 4 2 141 2R:21006986-21007092 7 67.5 1438 FBgn0034570 1491.83 26.02 40.1 0.045246442 2.59415834 1.683291771 -7 -7 -7 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2R 21050760 21050765 - 2R_21050760_21050765_- 0.869172756 0.802805843 0.8359893 0.046928556 shg FBtr0071546 21049652 21050805 2R - 21050726 21050807 stop_codon shg FlyBase G25351.1 AGGAATCTTCGCCAGCCGCGGTATGATGACGTAGAAATTGAAAAGACTTTTTATATACTAAGAGTTGTACGGATGTTGATAG 55 21050758 0.985065834 10 54 440 0.984615385 1.806179974 0.2 0.145454545 0.276923077 55 1 0 64 2R:21050726-21050807 6 shg FBtr0071546 21049652 21050805 AAGACT 6mer3-8 dme-miR-14-3p 2R - 21050743 21050785 3'utr shg FlyBase G19172.1 ATGATGACGTAGAAATTGAAAAGACTTTTTATATACTAAGAGT 48 21050758 0.676075888 3 47 381 0.985507246 1.832508913 0.202898551 0.3125 0.52173913 48 1 0 68 2R:21050743-21050785 6 49 1439 FBgn0003391 514.9966667 9.77 15.06666667 0.095146247 5.015353122 3.252212389 -7 -7 -7 0.1 dme-miR-980-5p 6mer3-8 GAAAAA 2R 21059237 21059242 + 2R_21059237_21059242_+ 0.999928884 0.983150711 0.991539797 0.011863979 cpa FBtr0071532 21059060 21059883 2R + 21059226 21059267 3'utr cpa FlyBase G17833.1 AGGTGCCTGCCGAAAAAGCAAATGTCTGTAATTGGCTATATA 51 21059258 0.726238908 6 50 321 0.983333333 1.770852012 0.2 0.156862745 0.283333333 51 1 0 59 2R:21059226-21059267 6 cpa FBtr0071532 21059060 21059883 GAAAAA 6mer3-8 dme-miR-980-5p 2R + 21059226 21059271 3'utr cpa FlyBase G13569.1 AGGTGCCTGCCGAAAAAGCAAATGTCTGTAATTGGCTATATACATA 39 21059258 0.619731618 6 38 241 0.984126984 1.491361694 0.063492063 0.487179487 0.682539683 39 0 1 62 2R:21059226-21059271 6 37.5 1440 FBgn0034577 1983.766667 126.3666667 193.9 0.018903433 0.296755473 0.193398659 -21 -21 -21 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2R 21059772 21059777 + 2R_21059772_21059777_+ 0.999465893 0.995365367 0.99741563 0.002899491 cpa FBtr0071532 21059060 21059883 2R + 21059695 21059793 3'utr cpa FlyBase G17836.1 CCTAGTATGAGCATGAATAATAACTATGCTAAACCACTGATCATTTTTGCCAGCTCTCCATTGACAAACAATAACTAAAGACTTTGATTTTATAAAAAC 83 21059779 0.982072357 10 83 616 1 1.982271233 0.020833333 0.144578313 0.260416667 83 0 0 96 2R:21059695-21059793 6 cpa FBtr0071532 21059060 21059883 AAGACT 6mer3-8 dme-miR-14-3p 2R + 21059729 21059794 3'utr cpa FlyBase G13571.1 CACTGATCATTTTTGCCAGCTCTCCATTGACAAACAATAACTAAAGACTTTGATTTTATAAAAACA 58 21059779 0.982576389 5 58 437 1 1.934498451 0.023255814 0.327586207 0.546511628 58 0 0 86 2R:21059729-21059794 6 65.5 1441 FBgn0034577 1983.766667 126.3666667 193.9 0.033017996 0.518332894 0.337802991 -7 -7 -7 0.1 dme-miR-8-3p 8mer-A1 CAGTATTA 2R 21088057 21088064 + 2R_21088057_21088064_+ 0.670453343 0.670896351 0.670674847 0.000313319 Treh FBtr0071540|FBtr0071538|FBtr0071539|FBtr0071536|FBtr0332423|FBtr0071537 21086953|21086953|21086953|21086953|21086953|21086953 21088226|21088226|21088226|21088226|21088226|21088226 2R + 21087963 21088129 3'utr Treh FlyBase G17844.1 ATTGCTACTCAAGTAGTGTGATTCCCCCCTCCGTGTTTGTGCGTGTGTTGTGAAGTCTGTAGTTGCTAACGTTTTTCGTTGAGTGCGGAGATTGCAGTATTAGTTTATCATTATTTGGTAGTTGAAGTGAGAGTTGTATATACTGAATTTATATGGGCATGCCCGAA 232 21088054 0.898140458 22 228 2040 0.985714286 2.139879086 0.05 0.168103448 0.310714286 232 3 1 276 2R:21087963-21088129 8 Treh FBtr0071536|FBtr0332423|FBtr0071537|FBtr0071540|FBtr0071538|FBtr0071539 21086953|21086953|21086953|21086953|21086953|21086953 21088226|21088226|21088226|21088226|21088226|21088226 CAGTATTA 8mer-A1 dme-miR-8-3p 2R + 21088009 21088138 3'utr Treh FlyBase G13577.1 GTTGTGAAGTCTGTAGTTGCTAACGTTTTTCGTTGAGTGCGGAGATTGCAGTATTAGTTTATCATTATTTGGTAGTTGAAGTGAGAGTTGTATATACTGAATTTATATGGGCATGCCCGAAATTGTTATT 186 21088054 0.900389723 20 181 1678 0.97689769 2.170261715 0.02970297 0.440860215 0.656765677 186 6 1 296 2R:21088009-21088138 8 151.5 1442 FBgn0003748 466.8133333 20.13666667 30.89333333 0.324540859 7.52358881 4.903970652 3 3 3 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 21123786 21123793 - 2R_21123786_21123793_- 0.615096171 0.623793333 0.619444752 0.006149778 CG4050 FBtr0071637|FBtr0071638 21123733|21123733 21124117|21124117 2R - 21123782 21123824 3'utr CG4050 FlyBase G25374.2 ACGTAATTTATATATGAAGGCCTGACGGTCTTGCATTTATTTA 8 21123794 0.968906009 3 6 64 0.75 0.77815125 0.125 0 0 8 2 0 6 2R:21123782-21123824 8 CG4050 FBtr0071637|FBtr0071638 21123733|21123733 21124117|21124117 TGCATTTA 8mer-A1 dme-miR-277-3p 2R - 21123755 21123808 3'utr CG4050 FlyBase G19189.1 AAGGCCTGACGGTCTTGCATTTATTTAAATAACGTTAGGACGTGTACTAAAATA 7 21123794 0.987773602 4 7 62 1 1 0.3 0.428571429 0.6 7 0 0 10 2R:21123755-21123808 8 6 1443 FBgn0020312 364 12.77333333 19.31 0.016483516 0.469728601 0.310719834 1 1 1 0.1 dme-miR-252-5p 7mer-m8 GTACTTA 2R 21123956 21123962 - 2R_21123956_21123962_- 0.588299917 0.588299917 0.588299917 0 CG4050 FBtr0071637|FBtr0071638 21123733|21123733 21124117|21124117 2R - 21123896 21124048 3'utr CG4050 FlyBase G25375.1 AAGGTTCCCACATTCTGTGAGACATACGGAGTCTGATAAAAATAACACAAAGTGAAGATATGTGGTCCATTCCACACAATTCCGTTGTACTTATTAGTTATTAACGTAATTCTTTGATCATATACTCGTTTTGAAGATATTTATACAATTTTT 144 21123963 0.758965847 33 134 1291 0.934911243 1.596597096 0.142011834 0.166666667 0.289940828 144 8 3 158 2R:21123896-21124048 7 CG4050 FBtr0071637|FBtr0071638 21123733|21123733 21124117|21124117 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 21123903 21124046 3'utr CG4050 FlyBase G19190.1 GGTTCCCACATTCTGTGAGACATACGGAGTCTGATAAAAATAACACAAAGTGAAGATATGTGGTCCATTCCACACAATTCCGTTGTACTTATTAGTTATTAACGTAATTCTTTGATCATATACTCGTTTTGAAGATATTTATAC 95 21123963 0.772790172 26 90 783 0.957142857 1.826074803 0.221428571 0.347368421 0.557142857 95 5 1 134 2R:21123903-21124046 7 57 1444 FBgn0020312 364 12.77333333 19.31 0.156593407 4.462421712 2.951838426 1 1 1 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 21129646 21129653 - 2R_21129646_21129653_- 0.500119571 0.50012031 0.500119941 4.95E-07 Magi FBtr0071636|FBtr0342874|FBtr0342873 21129461|21129461|21129461 21129874|21129874|21129874 2R - 21129550 21129695 3'utr Magi FlyBase G25389.1 TTCTTAAGATACCGATCATTATCTTAGGCTAAGTTACTGCTTGTACTTAAACGTTAAGACAATTTGCCAGTTTGTGAGATATTAATCACTTAGCTTAAGCTGTTTTAGACATATACGAATTGTACAAATGTAAAGGACTTTAAATT 98 21129654 0.797334114 26 89 797 0.925 1.443262987 0.066666667 0.183673469 0.333333333 98 6 3 111 2R:21129550-21129695 8 Magi FBtr0071636|FBtr0342874|FBtr0342873 21129461|21129461|21129461 21129874|21129874|21129874 GTACTTAA 8mer-A1 dme-miR-252-5p 2R - 21129526 21129690 3'utr Magi FlyBase G19200.1 AAGATACCGATCATTATCTTAGGCTAAGTTACTGCTTGTACTTAAACGTTAAGACAATTTGCCAGTTTGTGAGATATTAATCACTTAGCTTAAGCTGTTTTAGACATATACGAATTGTACAAATGTAAAGGACTTTAAATTTTTATCTCGAGTATGTATATTATT 92 21129654 0.988612359 24 84 787 0.923076923 1.51851394 0.13986014 0.391304348 0.608391608 92 8 3 132 2R:21129526-21129690 8 43.5 1445 FBgn0034590 938.3433333 22.88 35.01 0.046358298 1.901223776 1.242502142 1 1 1 0.1 dme-miR-1006-3p 7mer-A1 GAATTTA 2R 21129763 21129769 - 2R_21129763_21129769_- 0.691193155 0.424817503 0.558005329 0.188356064 Magi FBtr0071636|FBtr0342874|FBtr0342873 21129461|21129461|21129461 21129874|21129874|21129874 2R - 21129725 21129892 stop_codon Magi FlyBase G25390.1 CAGCAGCCACAATTATGACTCTGAGACCTACGCATTCGGCTCTATAAGAGCTTTCTATAGTGTTGCATCGCCTGCAGGCCCTTAGTTTGTACTTTCGTTAGCAAAGTACTCACCCCAAAGACTGAATTTAGTAGCATATGTAAGCCAAACCCTTTGCAAGTCTCAAAA 125 21129766 0.974034658 20 115 711 0.923611111 1.822821645 0.118055556 0.128 0.243055556 125 10 1 133 2R:21129725-21129892 7 Magi FBtr0071636|FBtr0342874|FBtr0342873 21129461|21129461|21129461 21129874|21129874|21129874 GAATTTA 7mer-A1 dme-miR-1006-3p 2R - 21129725 21129838 3'utr Magi FlyBase G19201.1 CTATAGTGTTGCATCGCCTGCAGGCCCTTAGTTTGTACTTTCGTTAGCAAAGTACTCACCCCAAAGACTGAATTTAGTAGCATATGTAAGCCAAACCCTTTGCAAGTCTCAAAA 89 21129765 0.972189483 20 81 505 0.902255639 2.079181246 0.082706767 0.348314607 0.563909774 89 13 0 120 2R:21129725-21129838 7 76 1446 FBgn0034590 938.3433333 22.88 35.01 0.080993808 3.321678322 2.17080834 -3 -4 -3.5 0.1 dme-miR-2a-2-5p 7mer-m1 GATGAGG 2R 21145401 21145407 + 2R_21145401_21145407_+ 0.719776298 0.808747551 0.764261924 0.06291221 Xbp1 FBtr0310044 21144863 21145750 2R + 21145285 21145523 stop_codon Xbp1 FlyBase G17860.1 AGGCGATCTCCCCGTTGGCCAAATCCCCCGCATTGTCTCTACACTCGGCCACCTCGGACCATGGATACGAGTCCATACTGGGCTCTCCCACATCCGTGGCTCTCACTCTGCCCGCAGATGAGGACGATTTCCCCTGGGAGAGCAACTTTGACGAGCTGTTTCCCAGTTTGATCTGAGTTTTTCAAGCTGAAAACTTCGTTCTGTCTCTCTTTTATTGTTAAGTTTGGCCGGCCGCCGTT 201 21145413 0.90449879 44 195 1596 0.976284585 1.790636962 0.134387352 0.208955224 0.371541502 201 3 3 247 2R:21145285-21145523 7 Xbp1 FBtr0310044 21144863 21145750 GATGAGG 7mer-m1 dme-miR-2a-2-5p 2R + 21145374 21145473 stop_codon Xbp1 FlyBase G13597.1 ACATCCGTGGCTCTCACTCTGCCCGCAGATGAGGACGATTTCCCCTGGGAGAGCAACTTTGACGAGCTGTTTCCCAGTTTGATCTGAGTTTTTCAAGCTG 79 21145413 0.858162389 16 66 450 0.956896552 1.744292983 0.224137931 0.358974359 0.568965517 78 4 1 111 2R:21145374-21145473 7 30 1447 FBgn0021872 6665.376667 377.2933333 573.4833333 0.004500871 0.079513729 0.052311895 -12 -12 -12 0.1 dme-bantam-3p 6mer3-8 TGATCT 2R 21145453 21145458 + 2R_21145453_21145458_+ 0.999086083 0.999753704 0.999419893 0.000472064 Xbp1 FBtr0310044 21144863 21145750 2R + 21145285 21145523 stop_codon Xbp1 FlyBase G17860.1 AGGCGATCTCCCCGTTGGCCAAATCCCCCGCATTGTCTCTACACTCGGCCACCTCGGACCATGGATACGAGTCCATACTGGGCTCTCCCACATCCGTGGCTCTCACTCTGCCCGCAGATGAGGACGATTTCCCCTGGGAGAGCAACTTTGACGAGCTGTTTCCCAGTTTGATCTGAGTTTTTCAAGCTGAAAACTTCGTTCTGTCTCTCTTTTATTGTTAAGTTTGGCCGGCCGCCGTT 201 21145452 0.90449879 44 195 1596 0.976284585 1.790636962 0.134387352 0.208955224 0.371541502 201 3 3 247 2R:21145285-21145523 6 Xbp1 FBtr0310044 21144863 21145750 TGATCT 6mer3-8 dme-bantam-3p 2R + 21145374 21145473 stop_codon Xbp1 FlyBase G13597.1 ACATCCGTGGCTCTCACTCTGCCCGCAGATGAGGACGATTTCCCCTGGGAGAGCAACTTTGACGAGCTGTTTCCCAGTTTGATCTGAGTTTTTCAAGCTG 79 21145452 0.858162389 16 66 450 0.956896552 1.744292983 0.224137931 0.358974359 0.568965517 78 4 1 111 2R:21145374-21145473 6 44.5 1448 FBgn0021872 6665.376667 377.2933333 573.4833333 0.006676292 0.117945365 0.077595978 1 1 1 0.1 dme-miR-1012-3p 8mer-A1 TTGACTAA 2R 21145710 21145717 + 2R_21145710_21145717_+ 0.607942325 0.60923745 0.608589888 0.000915845 Xbp1 FBtr0310044|FBtr0310045 21144863|21145459 21145750|21145750 2R + 21145608 21145741 3'utr Xbp1 FlyBase G17861.2 TAGCTGTAGGTTTCCATTTATATTTAACAATCTCTAACCACATAGGCTTATGATTACTCTTATATGTATGTATTGTGCTCAAAGAATTTGAAAAAAAAACATTTGACTAAAAAATATTCAAAATATAAACCAAA 429 21145709 0.846178406 28 409 2740 0.960784314 2.088136089 0.145098039 0.153846154 0.288235294 429 17 3 490 2R:21145608-21145741 8 Xbp1 FBtr0310044|FBtr0310045 21144863|21145459 21145750|21145750 TTGACTAA 8mer-A1 dme-miR-1012-3p 2R + 21145623 21145748 3'utr Xbp1 FlyBase G13598.2 ATTTATATTTAACAATCTCTAACCACATAGGCTTATGATTACTCTTATATGTATGTATTGTGCTCAAAGAATTTGAAAAAAAAACATTTGACTAAAAAATATTCAAAATATAAACCAAACCAAACA 254 21145709 0.967857902 28 241 1539 0.96 1.681241237 0.105714286 0.279527559 0.477142857 254 8 6 336 2R:21145623-21145748 8 183 1449 FBgn0021872 6665.376667 377.2933333 573.4833333 0.027455313 0.485033749 0.31910256 1 1 1 0.1 dme-miR-276a-3p 7mer-A1 GTTCCTA 2R 21148379 21148385 - 2R_21148379_21148385_- 0.823340278 0.82334656 0.823343419 4.45E-06 CG30389 FBtr0310423 21148263 21149340 2R - 21148373 21148404 3'utr CG30389 FlyBase G25405.1 ATTTTTGTTTAGTTCTGCTGTTCCTAAGAAAC 13 21148386 0.740578779 3 13 115 1 1.113943352 0.230769231 0 0 13 0 0 13 2R:21148373-21148404 7 CG30389 FBtr0310423 21148263 21149340 GTTCCTA 7mer-A1 dme-miR-276a-3p 2R - 21148368 21148400 3'utr CG30389 FlyBase G19216.1 TTGTTTAGTTCTGCTGTTCCTAAGAAACAAAAA 11 21148386 0.962646018 2 8 75 0.588235294 0.698970004 0 0.363636364 0.588235294 11 6 1 10 2R:21148368-21148400 7 12 1450 FBgn0050389 2516.626667 66.38 102.5 0.004768288 0.180777343 0.117073171 1 1 1 0.1 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2R 21148537 21148542 - 2R_21148537_21148542_- 1 1 1 0 CG30389 FBtr0310423 21148263 21149340 2R - 21148461 21148587 3'utr CG30389 FlyBase G25406.1 TTTGCACGACCTCTGCCTCTTGCCCAACGATTCAATGGAATATTTTTGAAGTCTGCGCCCTTGATTTATTATCTCATTAAATTATTTTTGTTATAAAACCTTAAATGTATGCTATAATTTAGAACCT 52 21148521 0.824957765 14 45 466 0.867647059 1.293730757 0.25 0.269230769 0.441176471 52 7 2 59 2R:21148461-21148587 6 CG30389 FBtr0310423 21148263 21149340 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2R - 21148498 21148581 3'utr CG30389 FlyBase G19217.1 CGACCTCTGCCTCTTGCCCAACGATTCAATGGAATATTTTTGAAGTCTGCGCCCTTGATTTATTATCTCATTAAATTATTTTTG 33 21148535 0.801786664 18 32 303 0.98 1.69019608 0.22 0.393939394 0.6 33 1 0 49 2R:21148498-21148581 6 23 1451 FBgn0050389 2516.626667 66.38 102.5 0.009139218 0.346489907 0.224390244 -21 -7 -14 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 21148649 21148654 - 2R_21148649_21148654_- 0.99396841 0.895335323 0.944651867 0.069744134 CG30389 FBtr0310423 21148263 21149340 2R - 21148613 21148705 3'utr CG30389 FlyBase G25407.1 AAGCCAAGGAAGTACCCCCCAAAATCCTATGTAAAATGTTTTCTATTTTTTACCAAACGCTGTGACAGAGTTGGACCAACCGAAGTGATGGCC 22 21148656 0.999947989 9 20 133 0.916666667 1.342422681 0 0.090909091 0.166666667 22 2 0 22 2R:21148613-21148705 6 CG30389 FBtr0310423 21148263 21149340 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 21148599 21148661 3'utr CG30389 FlyBase G19218.1 ATTTTTTACCAAACGCTGTGACAGAGTTGGACCAACCGAAGTGATGGCCATGATCTTGGGGAG 15 21148656 0.97120576 7 13 74 0.869565217 1.301029996 0 0.533333333 0.695652174 15 3 0 20 2R:21148599-21148661 6 13 1452 FBgn0050389 2516.626667 66.38 102.5 0.005165645 0.195842121 0.126829268 2 2 2 0.1 dme-miR-304-5p 8mer-A1 TGAGATTA 2R 21149249 21149256 - 2R_21149249_21149256_- 0.625363217 0.625363289 0.625363253 7.07E-08 CG30389 FBtr0310423|FBtr0071632|FBtr0071633|FBtr0330235 21148263|21148731|21148731|21148731 21149340|21149340|21149340|21149340 2R - 21149238 21149283 stop_codon CG30389 FlyBase G25409.1 TCGCACATGCATCTGCGACGACAAGTTTGAGATTATTATACTTTAT 65 21149257 0.780796593 3 63 489 0.958333333 1.537819095 0.347222222 0.107692308 0.194444444 65 2 1 69 2R:21149238-21149283 8 CG30389 FBtr0310423|FBtr0330235|FBtr0071633|FBtr0071632 21148263|21148731|21148731|21148731 21149340|21149340|21149340|21149340 TGAGATTA 8mer-A1 dme-miR-304-5p 2R - 21149238 21149284 stop_codon CG30389 FlyBase G19221.1 CTCGCACATGCATCTGCGACGACAAGTTTGAGATTATTATACTTTAT 34 21149257 0.769324624 4 33 253 0.981132075 1.716003344 0.471698113 0.411764706 0.622641509 34 1 0 52 2R:21149238-21149284 8 49.5 1453 FBgn0050389 2516.626667 66.38 102.5 0.019669187 0.745706538 0.482926829 1 1 1 0.1 dme-miR-304-5p 8mer-A1 TGAGATTA 2R 21162115 21162122 - 2R_21162115_21162122_- 0.625359467 0.625361044 0.625360255 1.06E-06 CG4266 FBtr0342871|FBtr0113100|FBtr0310422|FBtr0071629 21161711|21161711|21161711|21161711 21162255|21162255|21164953|21162255 2R - 21162065 21162160 3'utr CG4266 FlyBase G25426.1 GTAACTCCATACATGCGAACATTTTACCGTTTTTAAATTGAGATTACGTAGCATTTTTGACGAGGGGGGTGGGGGTTGAACCGGACGCTTTTAAAA 23 21162123 0.986398093 6 22 182 0.961538462 1.397940009 0.192307692 0.130434783 0.230769231 23 1 0 25 2R:21162065-21162160 8 CG4266 FBtr0310422|FBtr0071629|FBtr0342871|FBtr0113100 21161711|21161711|21161711|21161711 21164953|21162255|21162255|21162255 TGAGATTA 8mer-A1 dme-miR-304-5p 2R - 21162106 21162140 3'utr CG4266 FlyBase G19232.1 ATTTTACCGTTTTTAAATTGAGATTACGTAGCATT 6 21162123 0.819123942 2 6 61 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 2R:21162106-21162140 8 10.5 1454 FBgn0034598 911.3333333 25.02 38.24333333 0.01152158 0.419664269 0.274557657 1 1 1 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2R 21162660 21162665 - 2R_21162660_21162665_- 0.995858077 0.994836711 0.995347394 0.000722239 CG4266 FBtr0310422 21161711 21164953 2R - 21162636 21162699 3'utr CG4266 FlyBase G25428.1 GTGGACACCGAGGAGGATTGGGATCAGGAACTTCAAGACTATGAGGCGAGAATGGAGGCCCAGA 55 21162658 0.924243743 5 53 187 0.983870968 1.785329835 0.161290323 0.127272727 0.225806452 55 1 0 61 2R:21162636-21162699 6 CG4266 FBtr0310422 21161711 21164953 AAGACT 6mer3-8 dme-miR-14-3p 2R - 21162633 21162696 3'utr CG4266 FlyBase G19234.1 GACACCGAGGAGGATTGGGATCAGGAACTTCAAGACTATGAGGCGAGAATGGAGGCCCAGAAGC 38 21162658 0.909998636 4 37 121 0.983333333 1.770852012 0.266666667 0.394736842 0.616666667 38 1 0 59 2R:21162633-21162696 6 44.5 1455 FBgn0034598 911.3333333 25.02 38.24333333 0.048829554 1.778577138 1.163601499 -7 -7 -7 0.1 dme-miR-968-5p 6mer3-8 ACTACT 2R 21164783 21164788 - 2R_21164783_21164788_- 0.913739494 0.915980114 0.914859804 0.001584343 CG4266 FBtr0310422 21161711 21164953 2R - 21164700 21164816 5'utr CG4266 FlyBase G25431.1 AAGGGTGTGAAAAGCAAGGAGTGGAAGGACTACTGGGACCTCGAATTGGGTGTTACTTACATTCCTTGGTCCAAACTCAGTTCGGATACGGACTTCGACGCGCTGGAGGAGGGTGGT 17 21164783 0.932414116 6 17 69 1 1.322219295 0.333333333 0.235294118 0.380952381 17 0 0 21 2R:21164700-21164816 6 CG4266 FBtr0310422 21161711 21164953 ACTACT 6mer3-8 dme-miR-968-5p 2R - 21164763 21164801 5'utr CG4266 FlyBase G19236.1 AAGGAGTGGAAGGACTACTGGGACCTCGAATTGGGTGTT 9 21164783 0.824259855 2 9 38 1 1 0.4 0.111111111 0.2 9 0 0 10 2R:21164763-21164801 6 11 1456 FBgn0034598 911.3333333 25.02 38.24333333 0.012070227 0.439648281 0.287631831 -5 -5 -5 0.1 dme-miR-277-3p 6mer3-8 TGCATT 2R 21169989 21169994 - 2R_21169989_21169994_- 0.994252634 0.997409827 0.99583123 0.002232478 LSm1 FBtr0071628 21169967 21170064 2R - 21169976 21170009 3'utr LSm1 FlyBase G25437.1 TTTGTATATTTGTACTGCATTAAAAAACTATGTT 22 21169999 0.68222221 5 22 204 1 1.431363764 0 0.227272727 0.37037037 22 0 0 27 2R:21169976-21170009 6 LSm1 FBtr0071628 21169967 21170064 TGCATT 6mer3-8 dme-miR-277-3p 2R - 21169969 21170012 3'utr LSm1 FlyBase G19241.1 CTCTTTGTATATTTGTACTGCATTAAAAAACTATGTTAAAACCT 9 21170000 0.989505528 5 9 86 1 1.079181246 0 0.333333333 0.5 9 0 0 12 2R:21169969-21170012 6 15.5 1457 FBgn0261067 205 46.4 71.04 0.075609756 0.334051724 0.218186937 5 6 5.5 0.1 dme-miR-33-5p 6mer2-7 AATGCA 2R 21169989 21169994 + 2R_21169989_21169994_+ 0.992767324 0.987423481 0.990095402 0.003778637 hng1 FBtr0071575 21169943 21170010 2R + 21169969 21170006 3'utr hng1 FlyBase G17876.1 AGGTTTTAACATAGTTTTTTAATGCAGTACAAATATAC 23 21169991 0.821629737 6 20 211 0.807692308 1.322219295 0 0.130434783 0.230769231 23 5 0 21 2R:21169969-21170006 6 hng1 FBtr0071575 21169943 21170010 AATGCA 6mer2-7 dme-miR-33-5p 2R + 21169969 21170007 3'utr hng1 FlyBase G13608.1 AGGTTTTAACATAGTTTTTTAATGCAGTACAAATATACA 18 21169991 0.833590818 3 17 178 0.952380952 1.301029996 0.142857143 0.111111111 0.238095238 18 1 0 20 2R:21169969-21170007 6 19 1458 FBgn0034599 146 16.78333333 25.62333333 0.130136986 1.132075472 0.741511643 -2 -2 -2 0.1 dme-miR-34-5p 6mer2-7 ACTGCC 2R 21174115 21174120 + 2R_21174115_21174120_+ 0.999810824 0.999999886 0.999905355 0.000133714 Xpd FBtr0071576 21174077 21174504 2R + 21174088 21174138 3'utr Xpd FlyBase G17887.1 GGTGCTCTGCCAACCGGCTCTTTGTCGACTGCCTTCCGGGAATAACTCAAC 11 21174121 0.779960928 3 11 75 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 2R:21174088-21174138 6 Xpd FBtr0071576 21174077 21174504 ACTGCC 6mer2-7 dme-miR-34-5p 2R + 21174082 21174134 3'utr Xpd FlyBase G13614.1 GTGGAAGGTGCTCTGCCAACCGGCTCTTTGTCGACTGCCTTCCGGGAATAACT 11 21174121 0.714868072 4 11 82 1 1.113943352 0.230769231 0.181818182 0.307692308 11 0 0 13 2R:21174082-21174134 6 10.5 1459 FBgn0261850 258.9866667 11.14666667 16.99 0.040542628 0.941985646 0.618010594 -6 -6 -6 0.1 dme-miR-317-5p 6mer3-8 GTATCC 2R 21174398 21174403 + 2R_21174398_21174403_+ 0.991904095 0.994435764 0.993169929 0.001790182 Xpd FBtr0071576 21174077 21174504 2R + 21174380 21174407 3'utr Xpd FlyBase G17889.1 GTATCTATACCTGTGATTGTATCCGGAT 11 21174397 0.694988051 5 11 95 1 1.079181246 0 0.090909091 0.166666667 11 0 0 12 2R:21174380-21174407 6 Xpd FBtr0071576 21174077 21174504 GTATCC 6mer3-8 dme-miR-317-5p 2R + 21174354 21174402 3'utr Xpd FlyBase G13615.1 CGAGTTTTGCTCTTGCAGTTGTATTTGTATCTATACCTGTGATTGTATC 12 21174397 0.987362668 5 12 104 1 1.414973348 0 0.583333333 0.807692308 12 0 0 26 2R:21174354-21174402 5 11 1460 FBgn0261850 258.9866667 11.14666667 16.99 0.042473229 0.986842105 0.64743967 1 1 1 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 2R 21192178 21192184 + 2R_21192178_21192184_+ 0.520950347 0.520983507 0.520966927 2.35E-05 tud FBtr0342870|FBtr0071582 21192125|21192125 21192913|21192913 2R + 21192066 21192379 stop_codon tud FlyBase G17941.1 TGTCGTACGACTCTTCTACCAGAGCAAGAACATCAGCGAGAAGCTTCAGGAATGTCAGTGATCACCCCGTTGTACAGTCAGATCGGACTCATATGTGCTCCATGCAGGAGATTGTGATTGGGTTGGCTAAAAACATGCGATGTATTATCCATTAAGTTGAACGAGTTAAACTTATTCAAAGGGAAGAGGAGGACACCACACGATTAGCCAAGATGCTTCATTGACTTTTCATGGAAAACCAAAATGAAAGCAATTTTTAATATTAATTAAAGAATCAATACGGAATGCAAAACATTATCACCAAAAACACAACA 474 21192184 0.980054934 35 459 3211 0.970017637 1.837272703 0.276895944 0.160337553 0.298059965 474 10 7 550 2R:21192066-21192379 7 tud FBtr0342870|FBtr0071582 21192125|21192125 21192913|21192913 TGTGATT 7mer-m1 dme-miR-308-3p 2R + 21192096 21192227 stop_codon tud FlyBase G13660.1 CATCAGCGAGAAGCTTCAGGAATGTCAGTGATCACCCCGTTGTACAGTCAGATCGGACTCATATGTGCTCCATGCAGGAGATTGTGATTGGGTTGGCTAAAAACATGCGATGTATTATCCATTAAGTTGAAC 275 21192184 0.983545622 23 256 1974 0.932400932 1.397940009 0.282051282 0.392727273 0.610722611 275 14 15 400 2R:21192096-21192227 7 293 1461 FBgn0003891 6434.526667 87.37 133.74 0.045535595 3.353553851 2.190818005 -6 -6 -6 0.1 dme-miR-8-3p 8mer-A1 CAGTATTA 2R 21309176 21309183 + 2R_21309176_21309183_+ 0.671697675 0.671698121 0.671697898 2.83E-07 CG42672 FBtr0302702|FBtr0302703|FBtr0302704|FBtr0344188 21308996|21308996|21308996|21308996 21309434|21309434|21309434|21309434 2R + 21309134 21309187 3'utr CG42672 FlyBase G17967.1 CGATTTCTCGTATTACTTGTTTTATTCTTGCTTTGTCATGGTCAGTATTATTGA 15 21309175 0.990778344 6 14 150 0.947368421 0.954242509 0.368421053 0.266666667 0.421052632 15 0 1 18 2R:21309134-21309187 8 CG42672 FBtr0344188|FBtr0302704|FBtr0302703|FBtr0302702 21308996|21308996|21308996|21308996 21309434|21309434|21309434|21309434 CAGTATTA 8mer-A1 dme-miR-8-3p 2R + 21309127 21309188 3'utr CG42672 FlyBase G13682.1 CGAAACACGATTTCTCGTATTACTTGTTTTATTCTTGCTTTGTCATGGTCAGTATTATTGAC 16 21309175 0.993024053 7 14 169 0.826086957 1.278753601 0.347826087 0.4375 0.608695652 16 4 0 19 2R:21309127-21309188 8 14 1462 FBgn0261554 652.3633333 14.67 22.79 0.021460434 0.954328562 0.61430452 1 1 1 0.1 dme-miR-12-5p 8mer-A1 AATACTCA 2R 21319412 21319419 + 2R_21319412_21319419_+ 0.63769342 0.624772124 0.631232772 0.009136739 CG9485 FBtr0310327|FBtr0071599|FBtr0071601|FBtr0300395|FBtr0300394|FBtr0071600 21319401|21319401|21319401|21319401|21319401|21319401 21319569|21319569|21319569|21319569|21319569|21319569 2R + 21319403 21319445 3'utr CG9485 FlyBase G17973.1 ACCACCGTAAATACTCATATTCAAACCTGTTAGTTGCTACCAA 17 21319432 0.921745471 9 16 121 0.952380952 1.301029996 0.19047619 0.176470588 0.333333333 17 1 0 20 2R:21319403-21319445 8 CG9485 FBtr0300394|FBtr0071600|FBtr0071601|FBtr0300395|FBtr0310327|FBtr0071599 21319401|21319401|21319401|21319401|21319401|21319401 21319569|21319569|21319569|21319569|21319569|21319569 AATACTCA 8mer-A1 dme-miR-12-5p 2R + 21319402 21319444 3'utr CG9485 FlyBase G13685.1 AACCACCGTAAATACTCATATTCAAACCTGTTAGTTGCTACCA 7 21319433 0.983928252 5 7 53 1 0.903089987 0 0.142857143 0.25 7 0 0 8 2R:21319402-21319444 8 9.5 1463 FBgn0034618 1036.04 24.30333333 37.13 0.00916953 0.390892882 0.255857797 -20 -21 -20.5 0.1 dme-miR-14-3p 6mer2-7 AGACTG 2R 21336209 21336214 + 2R_21336209_21336214_+ 0.999975446 0.999997782 0.999986614 1.58E-05 dom FBtr0071604 21336064 21336986 2R + 21335998 21336277 stop_codon dom FlyBase G18016.1 CTAGCTCATCAGCAGCAGTCAGTGGTGTTTCGGGAGGAAATGCCTCCTCGAGCGGAACAGCCAGGTGATGATGTTCACTATCATACCTCAGTCAGTATTATCAGCTGTGTGTGTTGTGTGCGTTTTAGTGGGCGACTAATTATCTGTGGGGAGACGGGTCCTTCCCCGGCTGTTACTGCTGCCAGGCGACTGATGCATAATGAGTATTTATAGACTGTAACAAGTTTCCTTCTATCGTATGAGATAAGTTAGTTAGGCGCCGGAACCCACGCTAGAATCT 341 21336207 0.983059955 42 324 2466 0.955607477 2.310693312 0.119158879 0.211143695 0.371495327 341 18 1 409 2R:21335998-21336277 6 dom FBtr0071604 21336064 21336986 AGACTG 6mer2-7 dme-miR-14-3p 2R + 21336123 21336299 3'utr dom FlyBase G13724.2 TAGTGGGCGACTAATTATCTGTGGGGAGACGGGTCCTTCCCCGGCTGTTACTGCTGCCAGGCGACTGATGCATAATGAGTATTTATAGACTGTAACAAGTTTCCTTCTATCGTATGAGATAAGTTAGTTAGGCGCCGGAACCCACGCTAGAATCTAGAATAACAAATTAAACTTCAT 176 21336207 0.888485132 26 162 1215 0.922509225 1.795880017 0.084870849 0.392045455 0.605166052 176 18 3 250 2R:21336123-21336299 6 193 1464 FBgn0020306 6085.363333 78.23 120.3133333 0.031715444 2.467084239 1.604144733 2 2 2 0.1 dme-miR-1012-3p 8mer-A1 TTGACTAA 2R 21336851 21336858 + 2R_21336851_21336858_+ 0.626312841 0.572686925 0.599499883 0.037919238 dom FBtr0071604 21336064 21336986 2R + 21336814 21336877 3'utr dom FlyBase G18019.1 AATGGAACATTAACAATCTAAAGACTATGAGCATAGATTGACTAACCAATAAGACACAGAACTC 29 21336842 0.692505155 5 25 139 0.921052632 1.544068044 0.315789474 0.310344828 0.473684211 29 3 0 35 2R:21336814-21336877 8 dom FBtr0071604 21336064 21336986 TTGACTAA 8mer-A1 dme-miR-1012-3p 2R + 21336791 21336877 3'utr dom FlyBase G13725.1 AATTTATTTTGTACTCTAACCTAAATGGAACATTAACAATCTAAAGACTATGAGCATAGATTGACTAACCAATAAGACACAGAACTC 24 21336841 0.965206843 6 22 124 0.942857143 1.51851394 0.142857143 0.333333333 0.542857143 24 2 0 33 2R:21336791-21336877 8 16 1465 FBgn0020306 6085.363333 78.23 120.3133333 0.00262926 0.204525118 0.132986092 9 10 9.5 0.1 dme-bantam-3p 8mer-A1 TGATCTCA 2R 21341389 21341396 + 2R_21341389_21341396_+ 0.631135197 0.631135877 0.631135537 4.95E-07 dom FBtr0342890|FBtr0071603 21341126|21341126 21341847|21341847 2R + 21341362 21341655 stop_codon dom FlyBase G18032.2 CAGTCAATCAGCCCGTCATTGCTAAATTGATCTCAATTTCTGTCGATTGGTTTTGCAGCCATGAGCGATCTAACTGTTCTGGAGGATTGTGAGCTCAAGGTGAAACGCTGAAGATTACAACGATGATCGCTTCAATCAGCTCAAGGCATGGAAGCCGTATTACTAATTTTACTGATCCTTAGATATAGCACCTTAGCTTAAGTGAAATTTCATTGTATCTATTCATATTACGAGAATAGTTTTAAGGAAGTGTAGGTGGAGTGCCTAGTGTGTAGGCTAACTGCTTTAAATTCA 265 21341388 0.877750261 45 254 2351 0.957928803 1.994170456 0.090614887 0.15530303 0.278317152 264 11 2 296 2R:21341362-21341655 8 dom FBtr0071603|FBtr0342890 21341126|21341126 21341847|21341847 TGATCTCA 8mer-A1 dme-bantam-3p 2R + 21341348 21341497 stop_codon dom FlyBase G13736.1 ATCAGTCAGTCAGTCAGTCAATCAGCCCGTCATTGCTAAATTGATCTCAATTTCTGTCGATTGGTTTTGCAGCCATGAGCGATCTAACTGTTCTGGAGGATTGTGAGCTCAAGGTGAAACGCTGAAGATTACAACGATGATCGCTTCAAT 173 21341388 0.989425342 18 160 1550 0.921259843 2.369215857 0.062992126 0.323699422 0.539370079 173 20 0 234 2R:21341348-21341497 8 179 1466 FBgn0020306 6085.363333 78.23 120.3133333 0.029414842 2.28812476 1.487781903 1 1 1 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2R 21341789 21341794 + 2R_21341789_21341794_+ 1 0.999999719 0.99999986 2.12E-07 dom FBtr0342890|FBtr0071602|FBtr0071603 21341126|21341424|21341126 21341847|21341847|21341847 2R + 21341691 21341799 3'utr dom FlyBase G18033.1 CTATTCCCGTAGAGCAGTATGTACATTGGTAAATCTAATTCAGATCTATCAGATACTACATAAACACACCTAATATGTAGCTATAACTAAATGTCCTTTCTAGTTGTAT 19 21341787 0.986855854 9 17 154 0.913043478 1.322219295 0.173913043 0.210526316 0.347826087 19 2 0 21 2R:21341691-21341799 6 dom FBtr0071603|FBtr0342890|FBtr0071602 21341126|21341126|21341424 21341847|21341847|21341847 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 21341698 21341799 3'utr dom FlyBase G13738.1 CGTAGAGCAGTATGTACATTGGTAAATCTAATTCAGATCTATCAGATACTACATAAACACACCTAATATGTAGCTATAACTAAATGTCCTTTCTAGTTGTAT 15 21341788 0.988854569 8 14 131 0.944444444 1.230448921 0.333333333 0.2 0.333333333 15 1 0 17 2R:21341698-21341799 6 7 1467 FBgn0020306 6085.363333 78.23 120.3133333 0.001150301 0.089479739 0.058181415 2 1 1.5 0.1 dme-miR-1002-5p 6mer3-8 CTACTT 2R 21355075 21355080 - 2R_21355075_21355080_- 0.909562973 0.967607438 0.938585205 0.041043589 cv-2 FBtr0071610 21355013 21356005 2R - 21355048 21355096 3'utr cv-2 FlyBase G25470.1 AATAACTCTTTATATACTACTTGTATGGCTGGAACTGTAAGTTTACGAT 5 21355082 0.987447398 4 5 50 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2R:21355048-21355096 6 cv-2 FBtr0071610 21355013 21356005 CTACTT 6mer3-8 dme-miR-1002-5p 2R - 21355058 21355082 3'utr cv-2 FlyBase G19262.1 TACTACTTGTATGGCTGGAACTGTA 5 21355075 0.634511094 2 3 34 0.555555556 0.698970004 0 0.6 0.777777778 5 4 0 5 2R:21355058-21355082 6 5 1468 FBgn0000395 482.9966667 13.41666667 20.45666667 0.010352038 0.372670807 0.244419097 2 -5 -1.5 0.1 dme-miR-263a-5p 7mer-m1 TGCCATT 2R 21355152 21355158 - 2R_21355152_21355158_- 0.765586662 0.765578111 0.765582387 6.08E-06 cv-2 FBtr0071610 21355013 21356005 2R - 21355135 21355203 3'utr cv-2 FlyBase G25471.1 CAGCTAATTATGCACCTAACCGGCGGAAAGGAGGAGTCAGCTCTTTGCCATTTTTCGATTCTACAAATT 8 21355152 0.966570076 6 8 47 1 0.903089987 0 0 0 8 0 0 8 2R:21355135-21355203 7 cv-2 FBtr0071610 21355013 21356005 TGCCATT 7mer-m1 dme-miR-263a-5p 2R - 21355152 21355183 3'utr cv-2 FlyBase G19263.1 CGGCGGAAAGGAGGAGTCAGCTCTTTGCCATT 6 21355159 0.975610347 2 4 27 0.625 0.698970004 0.25 0.333333333 0.5 6 3 0 5 2R:21355152-21355183 6 4.5 1469 FBgn0000395 482.9966667 13.41666667 20.45666667 0.009316834 0.335403727 0.219977188 -6 1 -2.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 2R 21355536 21355541 - 2R_21355536_21355541_- 0.845739695 0.921299489 0.883519592 0.053428847 cv-2 FBtr0071610 21355013 21356005 2R - 21355505 21355638 3'utr cv-2 FlyBase G25474.1 TTATCCGGAGATCCTGTTGTTGCTTGTGTGCCTGTTTTGTATTTGTATTTGTATTTGTACTACTATATGTGTGTTTCGTCGCTGCGCTAAACTAAACTGATCTAAAAACTATAACTATAATTATAACTATAACT 52 21355541 0.849850421 13 46 396 0.861538462 1.447158031 0.307692308 0.192307692 0.353846154 52 8 1 56 2R:21355505-21355638 6 cv-2 FBtr0071610 21355013 21356005 TGATCT 6mer3-8 dme-bantam-3p 2R - 21355522 21355638 3'utr cv-2 FlyBase G19265.1 TTATCCGGAGATCCTGTTGTTGCTTGTGTGCCTGTTTTGTATTTGTATTTGTATTTGTACTACTATATGTGTGTTTCGTCGCTGCGCTAAACTAAACTGATCTAAAAACTATAACTA 34 21355541 0.831257545 13 33 259 0.97826087 1.653212514 0.347826087 0.323529412 0.5 34 1 0 45 2R:21355522-21355638 6 26 1470 FBgn0000395 482.9966667 13.41666667 20.45666667 0.053830599 1.937888199 1.270979306 0 0 0 0.1 dme-miR-970-3p 7mer-A1 CTTATGA 2R 21383486 21383492 - 2R_21383486_21383492_- 0.823341592 0.535035183 0.679188387 0.20386341 CG10795 FBtr0071609 21383225 21383560 2R - 21383447 21383507 3'utr CG10795 FlyBase G25482.1 ATACCTTAAGTACGGCTTATGACACTAACGATAAGCAACGACTGCGGATCCGTTCCGATCG 29 21383507 0.866713292 7 10 112 0.766666667 1.06069784 0.2 0.153846154 0.266666667 26 6 1 23 2R:21383447-21383507 7 CG10795 FBtr0071609 21383225 21383560 CTTATGA 7mer-A1 dme-miR-970-3p 2R - 21383448 21383523 3'utr CG10795 FlyBase G19270.1 ACTTTAAGTCCTTGTTATACCTTAAGTACGGCTTATGACACTAACGATAAGCAACGACTGCGGATCCGTTCCGATC 14 21383507 0.791009166 10 11 86 0.772727273 0.62838893 0.181818182 0.5 0.681818182 14 2 3 17 2R:21383448-21383523 7 7 1471 FBgn0034626 77 8.706666667 13.28666667 0.090909091 0.803981623 0.526843954 15 15 15 0.1 dme-miR-999-3p 7mer-m8 AGTTAAC 2R 21486857 21486863 + 2R_21486857_21486863_+ 0.674514267 0.674514267 0.674514267 0 Sara FBtr0071641 21486704 21487107 2R + 21486826 21486905 3'utr Sara FlyBase G18067.1 ATGAGGACATGTTGGTATTGTTGGATGGCTCAGTTAACTGTGTATATATTTAAGTAGCTCATCGTTTGGTTTTTGTCTAT 33 21486860 0.648207506 17 30 342 0.918918919 1.531478917 0.162162162 0.121212121 0.216216216 33 3 0 34 2R:21486826-21486905 7 Sara FBtr0071641 21486704 21487107 AGTTAAC 7mer-m8 dme-miR-999-3p 2R + 21486808 21486909 3'utr Sara FlyBase G13761.1 GAGTCCATGGGGCAAGAAATGAGGACATGTTGGTATTGTTGGATGGCTCAGTTAACTGTGTATATATTTAAGTAGCTCATCGTTTGGTTTTTGTCTATACAT 15 21486837 0.988138844 11 15 141 1 1.361727836 0.217391304 0.4 0.608695652 15 0 0 23 2R:21486808-21486909 7 10.5 1472 FBgn0026369 1340.356667 34.97 53.53333333 0.007833736 0.300257363 0.196139477 -3 20 8.5 0.1 dme-miR-11-3p 7mer-m1 TGTGATG 2R 21487034 21487040 + 2R_21487034_21487040_+ 0.53559356 0.535593563 0.535593561 0 Sara FBtr0071641 21486704 21487107 2R + 21486991 21487082 3'utr Sara FlyBase G18069.1 AAGTAAAACGTATCTAAGAAACCTAAATATATATATATTTGTATGTGATGTTCTTTAATATGCTTTACACATTTACCACTCGAGTATATATG 26 21487031 0.994925881 9 22 300 0.9 0.954242509 0.066666667 0.153846154 0.266666667 26 1 2 27 2R:21486991-21487082 7 Sara FBtr0071641 21486704 21487107 TGTGATG 7mer-m1 dme-miR-11-3p 2R + 21487007 21487083 3'utr Sara FlyBase G13762.1 AGAAACCTAAATATATATATATTTGTATGTGATGTTCTTTAATATGCTTTACACATTTACCACTCGAGTATATATGA 18 21487030 0.992858473 9 16 210 0.821428571 0.884606581 0.178571429 0.388888889 0.607142857 18 3 2 23 2R:21487007-21487083 7 18 1473 FBgn0026369 1340.356667 34.97 53.53333333 0.013429261 0.514726909 0.336239103 3 4 3.5 0.1 dme-miR-305-5p 7mer-m1 GTACAAT 2R 21487370 21487376 - 2R_21487370_21487376_- 0.586092852 0.765586663 0.675839757 0.126921283 Fkbp14 FBtr0300397|FBtr0342897|FBtr0342896|FBtr0071703|FBtr0306013 21487165|21487165|21487165|21487165|21487165 21487665|21487665|21487665|21487665|21487665 2R - 21487334 21487440 3'utr Fkbp14 FlyBase G25504.1 ATTAGAGGAGTGCATTAGTAGTTTGTGTGTCTGTAACCCCGGTACTAGACGTAGTTTAAATTATGTACAATCTGAGAGAGAATGAACATCATTTTTATATACATTTA 90 21487358 0.939522629 15 84 573 0.942307692 1.991226076 0.182692308 0.144444444 0.259615385 90 6 0 98 2R:21487334-21487440 7 Fkbp14 FBtr0071703|FBtr0306013|FBtr0342897|FBtr0342896|FBtr0300397 21487165|21487165|21487165|21487165|21487165 21487665|21487665|21487665|21487665|21487665 GTACAAT 7mer-m1 dme-miR-305-5p 2R - 21487320 21487421 3'utr Fkbp14 FlyBase G19287.1 AGTTTGTGTGTCTGTAACCCCGGTACTAGACGTAGTTTAAATTATGTACAATCTGAGAGAGAATGAACATCATTTTTATATACATTTATAGGTTGTTATATA 55 21487358 0.980377846 14 51 365 0.891566265 1.568201724 0.168674699 0.345454545 0.56626506 55 8 1 74 2R:21487320-21487421 7 36.5 1474 FBgn0010470 1256.333333 117.3933333 179.62 0.029052799 0.310920552 0.20320677 -18 -18 -18 0.1 dme-miR-2a-2-5p 7mer-m1 GATGAGG 2R 21487554 21487560 - 2R_21487554_21487560_- 0.825538111 0.82552641 0.825532261 8.27E-06 Fkbp14 FBtr0300397|FBtr0342897|FBtr0342896|FBtr0071703|FBtr0306013 21487165|21487165|21487165|21487165|21487165 21487665|21487665|21487665|21487665|21487665 2R - 21487442 21487581 3'utr Fkbp14 FlyBase G25505.1 AAAAATAGAACATATACAACAGATGAGGCACGAGCCGAGCAATAAATCGAGTGCAACCAAATGCTTCCCGATGTCATTTTGTATATAGCATACATATCAGCATCAGCATCAGCATCTGCATCTGCATCTAAACACCAACA 121 21487558 0.993367532 14 119 293 0.993197279 2.164352856 0.013605442 0.181818182 0.326530612 121 1 0 146 2R:21487442-21487581 7 Fkbp14 FBtr0071703|FBtr0306013|FBtr0342897|FBtr0342896|FBtr0300397 21487165|21487165|21487165|21487165|21487165 21487665|21487665|21487665|21487665|21487665 GATGAGG 7mer-m1 dme-miR-2a-2-5p 2R - 21487459 21487581 3'utr Fkbp14 FlyBase G19288.1 AAAAATAGAACATATACAACAGATGAGGCACGAGCCGAGCAATAAATCGAGTGCAACCAAATGCTTCCCGATGTCATTTTGTATATAGCATACATATCAGCATCAGCATCAGCATCTGCATCT 58 21487558 0.982340569 8 53 142 0.923913043 1.452297671 0 0.413793103 0.630434783 58 5 2 85 2R:21487459-21487581 7 68 1475 FBgn0010470 1256.333333 117.3933333 179.62 0.054125763 0.579249248 0.378576996 -2 -2 -2 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA 2R 21512684 21512689 + 2R_21512684_21512689_+ 0.999997925 0.99999618 0.999997053 1.20E-06 MESK2 FBtr0089710|FBtr0089703 21512447|21512447 21512725|21512725 2R + 21512570 21512706 3'utr MESK2 FlyBase G18084.1 ACGCACACACAAAGTACACAAACGTCCCTGACCCAACCTGATTTTAGTCTAAACGAAAATCTTTGAGAATCAAAAGCTTTTTGAGATGCATTGAAACGAAACCAAAAATCTATTGTGCAAAATTTTATATTTACAAA 125 21512682 0.957945587 18 121 707 0.972413793 2.149219113 0.034482759 0.128 0.248275862 125 4 0 141 2R:21512570-21512706 6 MESK2 FBtr0089703|FBtr0089710 21512447|21512447 21512725|21512725 GTGCAA 6mer3-8 dme-miR-92b-3p 2R + 21512575 21512706 3'utr MESK2 FlyBase G13772.1 CACACAAAGTACACAAACGTCCCTGACCCAACCTGATTTTAGTCTAAACGAAAATCTTTGAGAATCAAAAGCTTTTTGAGATGCATTGAAACGAAACCAAAAATCTATTGTGCAAAATTTTATATTTACAAA 90 21512682 0.952035687 13 89 496 0.992424242 2.117271296 0.068181818 0.344444444 0.553030303 90 1 0 131 2R:21512575-21512706 6 49 1476 FBgn0043070 584.3833333 29.10666667 44.48666667 0.083849072 1.683463124 1.101453619 2 2 2 0.1 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2R 21605708 21605713 - 2R_21605708_21605713_- 0.918359438 0.936842801 0.927601119 0.013069737 CG10433 FBtr0071690|FBtr0344882|FBtr0071691 21605674|21605674|21605674 21606071|21606071|21606325 2R - 21605679 21605797 3'utr CG10433 FlyBase G25520.1 TTAACTATATGTATATTAATTATATTGTACGAATAATTTTGTATGACATCTTAAGAGCCCCAAATCTACCCACAATGTGAAATATTTGACTGCTTCCAATAAATGCATTGTAAATATTT 53 21605712 0.983568705 15 51 406 0.942028986 1.812913357 0.507246377 0.264150943 0.434782609 53 4 0 65 2R:21605679-21605797 6 CG10433 FBtr0071691|FBtr0344882|FBtr0071690 21605674|21605674|21605674 21606325|21606071|21606071 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2R - 21605676 21605759 3'utr CG10433 FlyBase G19305.1 TTGTATGACATCTTAAGAGCCCCAAATCTACCCACAATGTGAAATATTTGACTGCTTCCAATAAATGCATTGTAAATATTTTCC 44 21605704 0.831555834 13 42 297 0.970149254 1.511883361 0.447761194 0.363636364 0.582089552 44 1 1 65 2R:21605676-21605759 6 39 1477 FBgn0034638 6526.64 846.7433333 1285.906667 0.00597551 0.046058821 0.030328795 -1 -9 -5 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2R 21606062 21606068 - 2R_21606062_21606068_- 0.808818472 0.80698622 0.807902346 0.001295632 CG10433 FBtr0071691|FBtr0071691 21605674|21605674 21606325|21606325 2R - 21606017 21606174 stop_codon CG10433 FlyBase G25523.1 CTGTGCGGAACACCTGGGACAGTGCATGGACCGATGCCACCAGAGGCTCCTGCGACCCGGTTCGGATTGCAAGAATGGCCAAGTCTGCTGCGTCCTGATTTAGTTATACTTAACCACACCATACACATACCCGTGCAGAGGAACAGCATCGTCAAATG 52 21606078 0.976479716 16 49 320 0.966101695 1.755874856 0.152542373 0.115384615 0.220338983 52 2 0 57 2R:21606017-21606174 7 CG10433 FBtr0071691|FBtr0071691 21605674|21605674 21606325|21606325 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2R - 21606061 21606103 stop_codon CG10433 FlyBase G19307.1 AGAATGGCCAAGTCTGCTGCGTCCTGATTTAGTTATACTTAAC 14 21606078 0.738780726 5 13 120 0.92 1.361727836 0.12 0.571428571 0.76 14 2 0 23 2R:21606061-21606103 7 9 1478 FBgn0034638 6526.64 846.7433333 1285.906667 0.001378964 0.010628959 0.006998953 10 10 10 0.1 dme-miR-92b-3p 6mer2-7 TGCAAT 2R 21614881 21614886 - 2R_21614881_21614886_- 0.997159835 0.999999958 0.998579896 0.002008325 CG18870 FBtr0071688|FBtr0345664 21614761|21613843 21615593|21615593 2R - 21614852 21614965 3'utr CG18870 FlyBase G25531.1 TCAATTTCGAGTATAAGATGTAGGCGCATACGCTCACAAGATAATGTACGAACTACAGTATTTACTCCACACATGTAACTGCAATGTAACTGAAAGTTCGGGCTAGTGGTCAGT 21 21614881 0.969143481 8 21 115 1 1.380211242 0.125 0.095238095 0.208333333 21 0 0 24 2R:21614852-21614965 6 CG18870 FBtr0345664|FBtr0071688 21613843|21614761 21615593|21615593 TGCAAT 6mer2-7 dme-miR-92b-3p 2R - 21614856 21614976 3'utr CG18870 FlyBase G19310.1 GTGTCAATTGTTCAATTTCGAGTATAAGATGTAGGCGCATACGCTCACAAGATAATGTACGAACTACAGTATTTACTCCACACATGTAACTGCAATGTAACTGAAAGTTCGGGCTAGTGGT 22 21614881 0.968206536 9 20 120 0.9 1.431363764 0.2 0.272727273 0.466666667 22 3 0 27 2R:21614856-21614976 6 12.5 1479 FBgn0042180 173 9.316666667 14.31333333 0.072254335 1.341681574 0.873311598 -5 -5 -5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG 2R 21615068 21615074 - 2R_21615068_21615074_- 0.702972137 0.702972138 0.702972138 0 CG18870 FBtr0071688|FBtr0345664 21614761|21613843 21615593|21615593 2R - 21615043 21615102 3'utr CG18870 FlyBase G25533.1 AAGACTGGGCCGAGCATTCCACATAGTTGTACCTGTTTCTGTACTGCATAGATATGTATA 155 21615075 0.744084706 10 148 1397 0.948186528 2.26245109 0.062176166 0.2 0.357512953 155 10 0 183 2R:21615043-21615102 7 CG18870 FBtr0345664|FBtr0071688 21613843|21614761 21615593|21615593 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" 2R - 21615044 21615102 3'utr CG18870 FlyBase G19312.1 AAGACTGGGCCGAGCATTCCACATAGTTGTACCTGTTTCTGTACTGCATAGATATGTAT 113 21615075 0.901522729 8 109 993 0.957575758 1.897627091 0.096969697 0.336283186 0.545454545 113 6 1 158 2R:21615044-21615102 7 129.5 1480 FBgn0042180 173 9.316666667 14.31333333 0.748554913 13.89982111 9.047508151 1 1 1 0.1 dme-miR-92b-3p 6mer2-7 TGCAAT 2R 21619359 21619364 - 2R_21619359_21619364_- 0.965165993 0.789662551 0.877414272 0.124099644 PTP-ER FBtr0071686 21619319 21620046 2R - 21619330 21619406 3'utr PTP-ER FlyBase G25547.1 AAGTAAAATGGAAACCCATAAATGAACATGTATTTAAGTTTATGCAATGGAACTAGTCAAATAAAAATTAGAAACAT 65 21619359 0.977130468 10 55 356 0.875 1.367976785 0.1875 0.184615385 0.3375 65 8 2 70 2R:21619330-21619406 6 PTP-ER FBtr0071686 21619319 21620046 TGCAAT 6mer2-7 dme-miR-92b-3p 2R - 21619332 21619386 3'utr PTP-ER FlyBase G19319.1 AATGAACATGTATTTAAGTTTATGCAATGGAACTAGTCAAATAAAAATTAGAAAC 37 21619359 0.970019958 6 31 179 0.890909091 1.69019608 0.181818182 0.324324324 0.545454545 37 6 0 49 2R:21619332-21619386 6 46 1481 FBgn0016641 329.97 7.83 11.97333333 0.139406613 5.874840358 3.841870824 -5 -5 -5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 21619648 21619653 - 2R_21619648_21619653_- 1 0.99999999 0.999999995 0 PTP-ER FBtr0071686 21619319 21620046 2R - 21619601 21619677 3'utr PTP-ER FlyBase G25548.2 AATTATTATACCCTACCTTACCTTACCAAAACCATACCTTACCATAAAGATGCGCATCTATATATGACTCGCGACGT 26 21619627 0.861228897 10 22 159 0.8 0.970036777 0 0.346153846 0.514285714 26 5 2 28 2R:21619601-21619677 6 PTP-ER FBtr0071686 21619319 21620046 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 21619612 21619673 3'utr PTP-ER FlyBase G19320.1 ATTATACCCTACCTTACCTTACCAAAACCATACCTTACCATAAAGATGCGCATCTATATATG 17 21619660 0.796097938 7 16 101 0.952380952 1.301029996 0 0.235294118 0.380952381 17 1 0 20 2R:21619612-21619673 6 12 1482 FBgn0016641 329.97 7.83 11.97333333 0.036366942 1.53256705 1.002227171 -26 7 -9.5 0.1 dme-miR-277-3p 6mer3-8 TGCATT 2R 21631123 21631128 + 2R_21631123_21631128_+ 0.999532963 0.991904453 0.995718708 0.005394164 mahj FBtr0304728|FBtr0071658 21630876|21630876 21631422|21631276 2R + 21631081 21631177 3'utr mahj FlyBase G18104.1 ATTTTTGAATTTTGTACAAATCAAATACGAATGCCGCAGGATTGCATTAAAGCCAGCTAAAGATTATTAAAGAGATCGCATAATGAGTACCAACTGT 35 21631127 0.826716667 8 35 189 1 1.62324929 0.095238095 0.142857143 0.285714286 35 0 0 42 2R:21631081-21631177 6 mahj FBtr0304728|FBtr0071658 21630876|21630876 21631422|21631276 TGCATT 6mer3-8 dme-miR-277-3p 2R + 21631085 21631145 3'utr mahj FlyBase G13789.1 TTGAATTTTGTACAAATCAAATACGAATGCCGCAGGATTGCATTAAAGCCAGCTAAAGATT 19 21631127 0.743143861 3 19 95 1 1.447158031 0.142857143 0.368421053 0.571428571 19 0 0 28 2R:21631085-21631145 6 17.5 1483 FBgn0034641 1067.043333 24.44 37.54 0.016400459 0.71603928 0.466169419 -4 -4 -4 0.1 dme-miR-305-5p 6mer2-7 GTACAA 2R 21631215 21631220 + 2R_21631215_21631220_+ 0.999923272 0.999867336 0.999895304 3.96E-05 mahj FBtr0304728|FBtr0071658 21630876|21630876 21631422|21631276 2R + 21631187 21631231 3'utr mahj FlyBase G18105.1 ATCTATAAATTGTTTAACAATTTTCATTGTACAAGCCTGAATAAA 6 21631213 0.983126183 3 5 40 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 2R:21631187-21631231 6 mahj FBtr0304728|FBtr0071658 21630876|21630876 21631422|21631276 GTACAA 6mer2-7 dme-miR-305-5p 2R + 21631188 21631228 3'utr mahj FlyBase G13790.1 TCTATAAATTGTTTAACAATTTTCATTGTACAAGCCTGAAT 5 21631213 0.983945263 2 5 40 1 0.84509804 0.285714286 0.2 0.428571429 5 0 0 7 2R:21631188-21631228 6 4.5 1484 FBgn0034641 1067.043333 24.44 37.54 0.004217261 0.184124386 0.119872136 2 2 2 0.1 dme-miR-305-3p 7mer-A1 TGTGCCA 2R 21638217 21638223 + 2R_21638217_21638223_+ 0.677468841 0.628131179 0.65280001 0.034886952 CG10321 FBtr0071660|FBtr0330228 21637910|21637970 21638399|21638399 2R + 21638138 21638235 3'utr CG10321 FlyBase G18127.1 AGCAGATACGAAACTTTAGGTAGGCAGATCGAGGCGGATCCTCACATCCAAACGCTTGGGGCATAAATCCTGCGTGGACTGTGCCAGTTTTTGTTTTT 71 21638219 0.882143491 10 69 374 0.974683544 1.58546073 0.17721519 0.098591549 0.189873418 71 1 1 77 2R:21638138-21638235 7 CG10321 FBtr0330228|FBtr0071660 21637970|21637910 21638399|21638399 TGTGCCA 7mer-A1 dme-miR-305-3p 2R + 21638131 21638236 3'utr CG10321 FlyBase G13803.1 TTTTGTAAGCAGATACGAAACTTTAGGTAGGCAGATCGAGGCGGATCCTCACATCCAAACGCTTGGGGCATAAATCCTGCGTGGACTGTGCCAGTTTTTGTTTTTA 54 21638219 0.764653944 12 52 272 0.952380952 1.425968732 0.30952381 0.388888889 0.607142857 54 2 2 80 2R:21638131-21638236 7 43.5 1485 FBgn0034643 611.73 22.34 34.24 0.071109803 1.947179946 1.270443925 -2 -2 -2 0.1 dme-miR-14-3p 6mer2-7 AGACTG 2R 21638281 21638286 + 2R_21638281_21638286_+ 0.999989613 0.999982602 0.999986108 4.95E-06 CG10321 FBtr0071660|FBtr0330228 21637910|21637970 21638399|21638399 2R + 21638240 21638307 3'utr CG10321 FlyBase G18128.1 TTATTACCCTACTATTATTATTTTGTTTTCCCGGGGAATACAGACTGGCATTTTAGGCTAAACGTATT 104 21638278 0.986806351 7 100 705 0.965517241 2.049218023 0.086206897 0.105769231 0.198275862 104 4 0 112 2R:21638240-21638307 6 CG10321 FBtr0330228|FBtr0071660 21637970|21637910 21638399|21638399 AGACTG 6mer2-7 dme-miR-14-3p 2R + 21638240 21638341 3'utr CG10321 FlyBase G13804.1 TTATTACCCTACTATTATTATTTTGTTTTCCCGGGGAATACAGACTGGCATTTTAGGCTAAACGTATTTTGGCGTTGGGTTTTCATTGTTGGGCTTTGAAAT 62 21638278 0.980888622 9 58 407 0.943820225 1.924279286 0.134831461 0.370967742 0.561797753 62 5 0 84 2R:21638240-21638341 6 78 1486 FBgn0034643 611.73 22.34 34.24 0.127507234 3.491495076 2.278037383 3 3 3 0.1 dme-miR-305-5p 8mer-m1 AGTACAAT 2R 21657153 21657160 + 2R_21657153_21657160_+ 0.567961792 0.567528828 0.56774531 0.000306177 CG10082 FBtr0071661|FBtr0071662 21657072|21657072 21657935|21657428 2R + 21657087 21657186 3'utr CG10082 FlyBase G18152.1 ACCACATCGGGAGAAAAGAATATGAATATATATATGGGGCAACTGGGCGGGAACACACAAGTTAAAAGTACAATTTGATTTCAGAATACCTAAATTGTTG 48 21657161 0.972558346 13 46 271 0.95 1.45484486 0.116666667 0.1875 0.35 48 2 1 57 2R:21657087-21657186 8 CG10082 FBtr0071662|FBtr0071661 21657072|21657072 21657428|21657935 AGTACAAT 8mer-m1 dme-miR-305-5p 2R + 21657082 21657193 3'utr CG10082 FlyBase G13818.1 TAGAAACCACATCGGGAGAAAAGAATATGAATATATATATGGGGCAACTGGGCGGGAACACACAAGTTAAAAGTACAATTTGATTTCAGAATACCTAAATTGTTGTAGCAAC 43 21657161 0.941819812 12 42 228 0.966666667 1.763427994 0.1 0.279069767 0.483333333 43 2 0 58 2R:21657082-21657193 8 25 1487 FBgn0034644 417.2733333 12.82666667 19.61 0.059912767 1.949064449 1.274859765 -8 -8 -8 0.1 dme-miR-277-3p 6mer2-7 GCATTT 2R 21657354 21657359 + 2R_21657354_21657359_+ 0.935181064 0.999999665 0.967590364 0.045833672 CG10082 FBtr0071661|FBtr0071662 21657072|21657072 21657935|21657428 2R + 21657322 21657376 3'utr CG10082 FlyBase G18154.1 AGGGCGGAGCGTGTTTCCCCCGATTAATCGCAGCATTTGTGGAGAACCAGGAGCG 5 21657360 0.943789359 4 5 22 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 2R:21657322-21657376 6 CG10082 FBtr0071662|FBtr0071661 21657072|21657072 21657428|21657935 GCATTT 6mer2-7 dme-miR-277-3p 2R + 21657347 21657377 3'utr CG10082 FlyBase G13820.1 AATCGCAGCATTTGTGGAGAACCAGGAGCGG 6 21657358 0.958133549 3 4 15 0.8 0.602059991 0.3 0.333333333 0.6 6 1 1 8 2R:21657347-21657377 6 4 1488 FBgn0034644 417.2733333 12.82666667 19.61 0.009586043 0.311850312 0.203977562 -6 -4 -5 0.1 dme-miR-33-5p 8mer-A1 CAATGCAA 2R 21657623 21657630 + 2R_21657623_21657630_+ 0.630481402 0.63455221 0.632516806 0.00287849 CG10082 FBtr0071661 21657072 21657935 2R + 21657598 21657679 3'utr CG10082 FlyBase G18156.1 GATTTTATACCTAGCCATTACAATTCAATGCAAAATGACAAAGCGATAGAGCGTAATCATCAGTATTTCGTTGTATGTATCT 28 21657622 0.859954774 5 28 207 1 1.491361694 0.612903226 0.107142857 0.193548387 28 0 0 31 2R:21657598-21657679 8 CG10082 FBtr0071661 21657072 21657935 CAATGCAA 8mer-A1 dme-miR-33-5p 2R + 21657608 21657670 3'utr CG10082 FlyBase G13821.1 CTAGCCATTACAATTCAATGCAAAATGACAAAGCGATAGAGCGTAATCATCAGTATTTCGTTG 23 21657622 0.800931886 3 22 138 0.939393939 1.491361694 0.575757576 0.304347826 0.515151515 23 2 0 31 2R:21657608-21657670 8 14 1489 FBgn0034644 417.2733333 12.82666667 19.61 0.03355115 1.091476091 0.713921469 1 1 1 0.1 dme-miR-11-3p 7mer-m1 TGTGATG 2R 21692013 21692019 + 2R_21692013_21692019_+ 0.510902065 0.509353136 0.510127601 0.001095308 CG42496 FBtr0300625|FBtr0342958 21691979|21691979 21692764|21692764 2R + 21691973 21692044 start_codon CG42496 FlyBase G18183.1 AGCAATAGCCGGCATTGTGAGCCATGAAACCCGAACGTAATGTGATGATAGCGGCCACCGGAAGTGTGGCCA 45 21692021 0.972963913 9 33 193 0.759259259 1.010723865 0.518518519 0.177777778 0.314814815 45 10 3 41 2R:21691973-21692044 7 CG42496 FBtr0342958|FBtr0300625 21691979|21691979 21692764|21692764 TGTGATG 7mer-m1 dme-miR-11-3p 2R + 21691977 21692058 start_codon CG42496 FlyBase G13838.1 ATAGCCGGCATTGTGAGCCATGAAACCCGAACGTAATGTGATGATAGCGGCCACCGGAAGTGTGGCCACCATTAAGTTAGCC 36 21692021 0.955417194 5 31 148 0.928571429 1.414973348 0.5 0.388888889 0.607142857 36 3 1 52 2R:21691977-21692058 7 35 1490 FBgn0260222 113.5 13.05 20.08333333 0.308370044 2.681992337 1.742738589 -8 -8 -8 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 21716636 21716643 + 2R_21716636_21716643_+ 0.625358257 0.625359702 0.625358979 9.90E-07 HmgD FBtr0071709|FBtr0071708 21715879|21715879 21716727|21716727 2R + 21716482 21716689 3'utr HmgD FlyBase G18195.1 ACGAAAAACAATACACACACCGCAAATGAATCGAACGAAATTTCGCTCAGGTCTTTTCGTCATTTTGCATTAAACTTAATGTTTAACGTCTTGTTAGCTAAAGATGTATAGCAGAAGAGGAAGTCGGAAGTTAGATGAGACAAGCAGATGTAATTGCATTTAATCGGTAGTTTTAATTGATTACTATACGTACTATTTAAAGAGAAAA 561 21716635 0.989745973 24 546 5364 0.975688817 2.001445241 0.235008104 0.08912656 0.171799028 561 10 5 602 2R:21716482-21716689 8 HmgD FBtr0071709|FBtr0071708 21715879|21715879 21716727|21716727 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 21716590 21716663 3'utr HmgD FlyBase G13848.1 TAGCAGAAGAGGAAGTCGGAAGTTAGATGAGACAAGCAGATGTAATTGCATTTAATCGGTAGTTTTAATTGATT 304 21716635 0.975189149 13 291 2786 0.958963283 2.170261715 0.306695464 0.368421053 0.585313175 304 17 2 444 2R:21716590-21716663 8 394 1491 FBgn0004362 7189.043333 869.6 1331.753333 0.054805623 0.453081877 0.295850583 1 1 1 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 2R 21717304 21717309 - 2R_21717304_21717309_- 0.999981842 0.999037589 0.999509715 0.00066765 Tango11 FBtr0342965|FBtr0071747|FBtr0071746 21716778|21716778|21716778 21717417|21717417|21717417 2R - 21717235 21717384 3'utr Tango11 FlyBase G25606.1 TCTGCGCTGGGTGCCAAGACAACCACCTTGCTATGGACACCCTTTTTGGAACAGCTTCTTTCGTTTCTTGACTTTTGTGTTTCTTTTGTGGAAAGGCTCTGAGAGAGACTTTGTTTTTTGTTTGCCATAATTTTGTAGACTAAGCTCCGT 55 21717310 0.926836458 21 54 503 0.984126984 1.491361694 0.19047619 0.127272727 0.238095238 55 0 1 62 2R:21717235-21717384 6 Tango11 FBtr0071746|FBtr0071747|FBtr0342965 21716778|21716778|21716778 21717417|21717417|21717417 TGTGTT 6mer3-8 dme-miR-317-3p 2R - 21717239 21717335 3'utr Tango11 FlyBase G19365.1 AACAGCTTCTTTCGTTTCTTGACTTTTGTGTTTCTTTTGTGGAAAGGCTCTGAGAGAGACTTTGTTTTTTGTTTGCCATAATTTTGTAGACTAAGCT 40 21717310 0.768185878 11 37 411 0.952380952 1.77815125 0.26984127 0.4 0.619047619 40 3 0 60 2R:21717239-21717335 6 19.5 1492 FBgn0050404 496.0066667 38.97333333 59.5 0.039313988 0.500342114 0.327731092 1 1 1 0.1 dme-miR-970-3p 6mer2-7 CTTATG 2R 21723924 21723929 + 2R_21723924_21723929_+ 0.997217031 0.996858904 0.997037967 0.000253215 LBR FBtr0071712|FBtr0071713|FBtr0071711 21723656|21723656|21723656 21724055|21724055|21724055 2R + 21723894 21723958 3'utr LBR FlyBase G18209.1 ATAGTTAAAAAACCCATCTAGCTGTACGAACTTATGCGCTTAAGATCTAGACATCTTATATAATC 350 21723928 0.965202527 11 339 2368 0.962529274 1.710751835 0.049180328 0.191428571 0.337236534 350 9 7 411 2R:21723894-21723958 6 LBR FBtr0071713|FBtr0071711|FBtr0071712 21723656|21723656|21723656 21724055|21724055|21724055 CTTATG 6mer2-7 dme-miR-970-3p 2R + 21723900 21723958 3'utr LBR FlyBase G13862.1 AAAAAACCCATCTAGCTGTACGAACTTATGCGCTTAAGATCTAGACATCTTATATAATC 211 21723928 0.754587737 9 208 1342 0.986970684 2.180412633 0.03257329 0.336492891 0.543973941 211 3 1 303 2R:21723900-21723958 6 276 1493 FBgn0034657 642.43 28.1 42.96 0.429618791 9.822064057 6.424581006 -4 -4 -4 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 2R 21975811 21975816 + 2R_21975811_21975816_+ 0.988175866 0.985959182 0.987067524 0.001567444 CG9304 FBtr0071726|FBtr0345537 21975523|21975523 21976196|21976386 2R + 21975790 21975826 3'utr CG9304 FlyBase G18216.1 AAGTTAACATTTAACTGACTTTTGACTTGAGCTGAGT 6 21975811 0.762634674 3 6 54 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 2R:21975790-21975826 6 CG9304 FBtr0071726|FBtr0345537 21975523|21975523 21976196|21976386 TTGACT 6mer3-8 dme-miR-1012-3p 2R + 21975790 21975825 3'utr CG9304 FlyBase G13868.1 AAGTTAACATTTAACTGACTTTTGACTTGAGCTGAG 11 21975810 0.821556826 4 11 80 1 1.278753601 0.473684211 0.545454545 0.736842105 11 0 0 19 2R:21975790-21975825 6 8.5 1494 FBgn0034674 656.3166667 28.69666667 44.06 0.012951065 0.296201649 0.192918747 0 1 0.5 0.1 dme-miR-278-3p 6mer3-8 CCCACC 2R 21975839 21975844 + 2R_21975839_21975844_+ 0.956865906 0.999972836 0.978419371 0.030481181 CG9304 FBtr0071726|FBtr0345537 21975523|21975523 21976196|21976386 2R + 21975827 21975856 3'utr CG9304 FlyBase G18217.1 TTTTAAAATCGACCCACCATTATCTCGACA 5 21975846 0.946895696 3 3 14 1 0.698970004 0.4 0 0 5 0 0 5 2R:21975827-21975856 6 CG9304 FBtr0071726|FBtr0345537 21975523|21975523 21976196|21976386 CCCACC 6mer3-8 dme-miR-278-3p 2R + 21975832 21975871 3'utr CG9304 FlyBase G13869.1 AAATCGACCCACCATTATCTCGACACAAATTTATCTGAGT 6 21975846 0.951378963 4 6 27 1 1 0 0.333333333 0.6 6 0 0 10 2R:21975832-21975871 6 3.5 1495 FBgn0034674 656.3166667 28.69666667 44.06 0.005332792 0.121965385 0.079437131 -7 -7 -7 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 2R 21975944 21975950 + 2R_21975944_21975950_+ 0.521218147 0.521212887 0.521215517 3.68E-06 CG9304 FBtr0071726|FBtr0345537 21975523|21975523 21976196|21976386 2R + 21975913 21975982 3'utr CG9304 FlyBase G18218.1 AGCGAGTGCAAGAATGCACCAGAGATTGTTGTGTGATTTTATGTAATATGCTTGAATTTATAATTAGTTT 51 21975942 0.991628349 10 50 544 0.983870968 1.785329835 0.064516129 0.196078431 0.338709677 51 1 0 61 2R:21975913-21975982 7 CG9304 FBtr0071726|FBtr0345537 21975523|21975523 21976196|21976386 TGTGATT 7mer-m1 dme-miR-308-3p 2R + 21975911 21975964 3'utr CG9304 FlyBase G13870.1 AGAGCGAGTGCAAGAATGCACCAGAGATTGTTGTGTGATTTTATGTAATATGCT 32 21975942 0.991411445 8 31 336 0.979166667 1.672097858 0.125 0.40625 0.604166667 32 1 0 47 2R:21975911-21975964 7 40 1496 FBgn0034674 656.3166667 28.69666667 44.06 0.06094619 1.393890115 0.907852928 2 2 2 0.1 dme-miR-965-3p 7mer-m8 TACGCTT 2R 21976016 21976022 + 2R_21976016_21976022_+ 0.620197858 0.620197973 0.620197915 7.07E-08 CG9304 FBtr0071726|FBtr0345537 21975523|21975523 21976196|21976386 2R + 21976003 21976035 3'utr CG9304 FlyBase G18219.1 CGATTCGATACAATACGCTTCAGCATCATCATT 51 21976016 0.873361361 3 50 258 0.984375 1.799340549 0.03125 0.235294118 0.390625 51 1 0 63 2R:21976003-21976035 7 CG9304 FBtr0071726|FBtr0345537 21975523|21975523 21976196|21976386 TACGCTT 7mer-m8 dme-miR-965-3p 2R + 21976003 21976050 3'utr CG9304 FlyBase G13871.1 CGATTCGATACAATACGCTTCAGCATCATCATTTCGTTGCGGTAGTTT 43 21976016 0.956900754 5 43 206 1 1.812913357 0.076923077 0.325581395 0.553846154 43 0 0 65 2R:21976003-21976050 7 46 1497 FBgn0034674 656.3166667 28.69666667 44.06 0.070088118 1.602973632 1.044030867 0 0 0 0.1 dme-miR-184-5p 8mer-A1 TGATAAGA 2R 22069514 22069521 + 2R_22069514_22069521_+ 0.591799475 0.586846734 0.589323104 0.003502158 Snp FBtr0339101|FBtr0339102|FBtr0339100|FBtr0339099 22069312|22069312|22069312|22069312 22069757|22069757|22069757|22069757 2R + 22069469 22069573 3'utr Snp FlyBase G18225.1 TTTTTTTTTTTTTGCCCTGATTTTATATTTTATTGTAACGGCAATTGATAAGACTTGAACAATTCGAAGCATCGCAGCGATCATACATACAAATAAATTTATAAA 66 22069516 0.965860183 7 64 352 0.950617284 1.886490725 0.12345679 0.181818182 0.333333333 66 4 0 77 2R:22069469-22069573 8 Snp FBtr0339100|FBtr0339099|FBtr0339101|FBtr0339102 22069312|22069312|22069312|22069312 22069757|22069757|22069757|22069757 TGATAAGA 8mer-A1 dme-miR-184-5p 2R + 22069500 22069538 3'utr Snp FlyBase G13876.1 ATTGTAACGGCAATTGATAAGACTTGAACAATTCGAAGC 26 22069516 0.692366864 6 20 124 0.825 1.51851394 0.1 0.461538462 0.65 26 7 0 33 2R:22069500-22069538 8 38 1498 FBgn0265192 273.9833333 20.67666667 31.70333333 0.138694568 1.837820409 1.198612133 -2 -2 -2 0.1 dme-miR-8-3p 7mer-A1 AGTATTA 2R 22077766 22077772 + 2R_22077766_22077772_+ 0.823349562 0.823349562 0.823349562 0 GlcT-1 FBtr0071755 22077671 22079381 2R + 22077680 22077961 3'utr GlcT-1 FlyBase G18240.1 TAGTTAAGTTTGTTATTTTGTACTTGTGAGCAAACGAACTCAGCGGACTGCAAGCGACTGGCGGGCGGCGTCTAGCGTCTGGTAGTAGTATTATTAGCTGAACCTTAGTCACTACGTAAGTCTAGACTTAAAGCTGTAAAAAGGCGAATGCGGAGCGGCATCCACGCACTCCTCCTGGACGTGAAGCGCGGCAGGCGGACCTAGATTAGTTTAGAAGACACTGTTTAGACGACGAGCGTATCGCTGCGATCGCTCGCCAGAGATTTAGATGTAGGCGTTCGA 158 22077776 0.999910226 36 151 1006 0.948979592 1.491361694 0.295918367 0.189873418 0.346938776 158 5 5 186 2R:22077680-22077961 7 GlcT-1 FBtr0071755 22077671 22079381 AGTATTA 7mer-A1 dme-miR-8-3p 2R + 22077613 22077877 stop_codon GlcT-1 FlyBase G13885.1 GGAACAACGGGGGACACGCTGATCTGCACGGGCGCCAAACAGCGACTGCTGGTGTCGTAGCACCTAATAGTTAAGTTTGTTATTTTGTACTTGTGAGCAAACGAACTCAGCGGACTGCAAGCGACTGGCGGGCGGCGTCTAGCGTCTGGTAGTAGTATTATTAGCTGAACCTTAGTCACTACGTAAGTCTAGACTTAAAGCTGTAAAAAGGCGAATGCGGAGCGGCATCCACGCACTCCTCCTGGACGTGAAGCGCGGCAGGCGG 87 22077776 0.970258852 29 81 467 0.928 1.763427994 0.36 0.298850575 0.512 87 8 1 116 2R:22077613-22077877 7 32.5 1499 FBgn0067102 306.5833333 10.92333333 16.72333333 0.106007067 2.97528227 1.943392466 -10 -10 -10 0.1 dme-miR-304-5p 6mer2-7 GAGATT 2R 22077939 22077944 + 2R_22077939_22077944_+ 0.85302918 0.864479329 0.858754254 0.008096443 GlcT-1 FBtr0071755 22077671 22079381 2R + 22077680 22077961 3'utr GlcT-1 FlyBase G18240.1 TAGTTAAGTTTGTTATTTTGTACTTGTGAGCAAACGAACTCAGCGGACTGCAAGCGACTGGCGGGCGGCGTCTAGCGTCTGGTAGTAGTATTATTAGCTGAACCTTAGTCACTACGTAAGTCTAGACTTAAAGCTGTAAAAAGGCGAATGCGGAGCGGCATCCACGCACTCCTCCTGGACGTGAAGCGCGGCAGGCGGACCTAGATTAGTTTAGAAGACACTGTTTAGACGACGAGCGTATCGCTGCGATCGCTCGCCAGAGATTTAGATGTAGGCGTTCGA 158 22077944 0.999910226 36 151 1006 0.948979592 1.491361694 0.295918367 0.189873418 0.346938776 158 5 5 186 2R:22077680-22077961 6 GlcT-1 FBtr0071755 22077671 22079381 GAGATT 6mer2-7 dme-miR-304-5p 2R + 22077891 22077960 3'utr GlcT-1 FlyBase G13886.1 TAGAAGACACTGTTTAGACGACGAGCGTATCGCTGCGATCGCTCGCCAGAGATTTAGATGTAGGCGTTCG 16 22077944 0.712944728 6 16 86 1 1.301029996 0.4 0.25 0.4 16 0 0 20 2R:22077891-22077960 6 16.5 1500 FBgn0067102 306.5833333 10.92333333 16.72333333 0.053818973 1.510527922 0.986645406 -5 -5 -5 0.1 dme-miR-970-3p 7mer-A1 CTTATGA 2R 22078194 22078200 + 2R_22078194_22078200_+ 0.757031548 0.754815035 0.755923292 0.001567302 GlcT-1 FBtr0071755 22077671 22079381 2R + 22078050 22078218 3'utr GlcT-1 FlyBase G18241.1 TAGCCAGCCTGTACAGAGACGTAAGCCCTAGTTAGCATTATGATTGCGATAGTTAGTTCTCCCCGCTTCTGTTGTTGCTTTATTGAGTTGTAATTATTTATTTTGGCCAAGCACACTAGGTATACTGTTATCGCTAAGCCTATACTTATGATTATTTTTAGTTAAGTTG 51 22078192 0.990870265 24 51 534 1 1.785329835 0.06557377 0.196078431 0.327868852 51 0 0 61 2R:22078050-22078218 7 GlcT-1 FBtr0071755 22077671 22079381 CTTATGA 7mer-A1 dme-miR-970-3p 2R + 22078156 22078230 3'utr GlcT-1 FlyBase G13889.1 CCAAGCACACTAGGTATACTGTTATCGCTAAGCCTATACTTATGATTATTTTTAGTTAAGTTGTTTGTGTTGTTT 10 22078177 0.988178915 8 10 104 1 1.113943352 0.076923077 0.2 0.384615385 10 0 0 13 2R:22078156-22078230 7 7 1501 FBgn0067102 306.5833333 10.92333333 16.72333333 0.022832291 0.640830027 0.418576839 2 17 9.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2R 22085376 22085382 + 2R_22085376_22085382_+ 0.823349562 0.8233494 0.823349481 1.41E-07 Synj FBtr0071757|FBtr0308239|FBtr0071756 22084902|22084902|22084902 22085767|22085767|22085421 2R + 22085362 22085397 3'utr Synj FlyBase G18263.1 AAATTATAGCCGTACTAGTCAAATTATGAAGTAAAG 10 22085373 0.757413683 4 10 64 1 1.146128036 0.071428571 0.3 0.5 10 0 0 14 2R:22085362-22085397 7 Synj FBtr0071757|FBtr0308239|FBtr0071756 22084902|22084902|22084902 22085767|22085767|22085421 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R + 22085306 22085386 3'utr Synj FlyBase G13903.1 TGAAGTATATGGGCGACAAAGTATTACACTAATCTGCATAAATGTAATGTTTAAATAAATTATAGCCGTACTAGTCAAATT 9 22085367 0.976053773 7 8 51 0.8 1.079181246 0 0.444444444 0.666666667 9 3 0 12 2R:22085306-22085386 7 7.5 1502 FBgn0034691 628.3666667 16.23 24.76333333 0.011935706 0.462107209 0.302867142 3 9 6 0.1 dme-miR-282-5p 7mer-A1 GAGGCTA 2R 22085548 22085554 + 2R_22085548_22085554_+ 0.823349455 0.82314118 0.823245318 0.00014729 Synj FBtr0071757|FBtr0308239 22084902|22084902 22085767|22085767 2R + 22085535 22085567 3'utr Synj FlyBase G18265.1 ATTCCGTCAATTTGAGGCTACATCCGGATTTCT 8 22085546 0.734100956 3 8 51 1 1 0 0.125 0.3 8 0 0 10 2R:22085535-22085567 7 Synj FBtr0071757|FBtr0308239 22084902|22084902 22085767|22085767 GAGGCTA 7mer-A1 dme-miR-282-5p 2R + 22085519 22085563 3'utr Synj FlyBase G13904.1 GTTAAACTATCGTTGTATTCCGTCAATTTGAGGCTACATCCGGAT 13 22085546 0.96545828 4 12 85 1 1.255272505 0.111111111 0.307692308 0.5 13 0 0 18 2R:22085519-22085563 7 9.5 1503 FBgn0034691 628.3666667 16.23 24.76333333 0.015118561 0.585335798 0.383631714 2 2 2 0.1 dme-miR-283-5p 7mer-A1 GATATTA 2R 22107934 22107940 - 2R_22107934_22107940_- 0.782911824 0.782911821 0.782911823 0 Vrp1 FBtr0302295|FBtr0071792|FBtr0071796|FBtr0071791|FBtr0071795|FBtr0071793|FBtr0302298|FBtr0071794|FBtr0342980 22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579 22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477 2R - 22107910 22107970 3'utr Vrp1 FlyBase G25635.1 AAGGGAAGGACTATGGAAGCTTCCCCTCGCGATATTACCACTAAGCACACACAATATTATT 36 22107936 0.972761253 7 31 175 0.895833333 0.934498451 0.229166667 0.305555556 0.479166667 36 1 4 43 2R:22107910-22107970 7 Vrp1 FBtr0071793|FBtr0302298|FBtr0071794|FBtr0342980|FBtr0302295|FBtr0071796|FBtr0071792|FBtr0071791|FBtr0071795 22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579 22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477 GATATTA 7mer-A1 dme-miR-283-5p 2R - 22107924 22107987 3'utr Vrp1 FlyBase G19387.1 ATTTTGTTACATTTCAAAAGGGAAGGACTATGGAAGCTTCCCCTCGCGATATTACCACTAAGCA 31 22107936 0.842584372 5 23 172 0.790697674 0.753327667 0.465116279 0.290322581 0.488372093 31 4 5 34 2R:22107924-22107987 7 29 1504 FBgn0243516 610.6533333 20.62333333 31.73 0.04749012 1.406174236 0.913961551 -4 -4 -4 0.1 dme-miR-8-3p 6mer3-8 CAGTAT 2R 22108229 22108234 - 2R_22108229_22108234_- 0.999999959 1 0.999999979 0 Vrp1 FBtr0302295|FBtr0071792|FBtr0071796|FBtr0071791|FBtr0071795|FBtr0071793|FBtr0302298|FBtr0071794|FBtr0342980 22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579 22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477 2R - 22108163 22108262 3'utr Vrp1 FlyBase G25637.1 AATTTTAATTTTAAAAGTGTATTACTACCAGTATAGATTATTATTGTATAGGAAGGGAAAGCCCAGGCTTACAATCCACAGCACACACATATATATGTTA 13 22108231 0.971263209 10 13 79 1 1.146128036 0.071428571 0.076923077 0.142857143 13 0 0 14 2R:22108163-22108262 6 Vrp1 FBtr0071793|FBtr0302298|FBtr0071794|FBtr0342980|FBtr0302295|FBtr0071796|FBtr0071792|FBtr0071791|FBtr0071795 22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579 22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477 CAGTAT 6mer3-8 dme-miR-8-3p 2R - 22108191 22108254 3'utr Vrp1 FlyBase G19389.1 TTTTAAAAGTGTATTACTACCAGTATAGATTATTATTGTATAGGAAGGGAAAGCCCAGGCTTAC 8 22108223 0.993185206 5 6 72 0.846153846 1.041392685 0.076923077 0.375 0.615384615 8 2 0 11 2R:22108191-22108254 6 6 1505 FBgn0243516 610.6533333 20.62333333 31.73 0.009825542 0.290932601 0.189095493 -3 -11 -7 0.1 dme-miR-970-3p 6mer2-7 CTTATG 2R 22217220 22217225 + 2R_22217220_22217225_+ 0.564051356 0.76710571 0.665578533 0.143581072 ari-2 FBtr0071774 22216391 22217264 2R + 22217100 22217248 3'utr ari-2 FlyBase G18327.1 AAGAACGAAGATAGATACTCCCCGTCCCCGATCCCGTTCCTTTTGATTCTCACTCGATTCTCGATTAACTTTGTAAGCTGAATCATAAATTATATTCTAGGATTACGCTATGTATGTATGCTTATGCGACTGAATTTGAATTAAATTTA 101 22217223 0.900660744 28 97 888 0.941176471 1.748188027 0.201680672 0.148514851 0.277310924 101 6 1 112 2R:22217100-22217248 6 ari-2 FBtr0071774 22216391 22217264 CTTATG 6mer2-7 dme-miR-970-3p 2R + 22217167 22217248 3'utr ari-2 FlyBase G13951.2 ACTTTGTAAGCTGAATCATAAATTATATTCTAGGATTACGCTATGTATGTATGCTTATGCGACTGAATTTGAATTAAATTTA 39 22217222 0.987367256 13 36 328 0.9375 1.77815125 0.28125 0.461538462 0.671875 39 4 0 60 2R:22217167-22217248 6 46 1506 FBgn0025186 276.3333333 11.22 17.22333333 0.166465621 4.099821747 2.670795433 -3 -2 -2.5 0.1 dme-miR-11-3p 7mer-m1 TGTGATG 2R 22298338 22298344 - 2R_22298338_22298344_- 0.535593562 0.53558614 0.535589851 5.30E-06 wdp FBtr0071851|FBtr0071852|FBtr0071849|FBtr0071850|FBtr0342984 22298212|22298212|22298212|22298212|22298212 22298905|22298905|22298905|22298905|22298905 2R - 22298329 22298440 3'utr wdp FlyBase G25682.1 TGAATTCAGTCGTCGAGTGCAAAATATCAATGAGCCGGGGAAAGCGGAAAGGAGTTAACTCTTTTGCATGATAAATGCTATCAATCTGCATCTGCATGTGATGTTCACACCA 19 22298353 0.995783327 9 19 133 1 1.342422681 0.090909091 0.157894737 0.272727273 19 0 0 22 2R:22298329-22298440 7 wdp FBtr0071850|FBtr0342984|FBtr0071852|FBtr0071849|FBtr0071851 22298212|22298212|22298212|22298212|22298212 22298905|22298905|22298905|22298905|22298905 TGTGATG 7mer-m1 dme-miR-11-3p 2R - 22298329 22298410 3'utr wdp FlyBase G19428.1 TGAGCCGGGGAAAGCGGAAAGGAGTTAACTCTTTTGCATGATAAATGCTATCAATCTGCATCTGCATGTGATGTTCACACCA 12 22298351 0.980695754 7 11 72 0.916666667 1.342422681 0.166666667 0.75 0.875 12 2 0 22 2R:22298329-22298410 7 8 1507 FBgn0034718 26.33333333 1.036666667 1.556666667 0.303797468 7.717041801 5.139186296 9 7 8 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2R 22298467 22298473 - 2R_22298467_22298473_- 0.663912225 0.611707719 0.637809972 0.036914156 wdp FBtr0071851|FBtr0071852|FBtr0071849|FBtr0071850|FBtr0342984 22298212|22298212|22298212|22298212|22298212 22298905|22298905|22298905|22298905|22298905 2R - 22298453 22298499 3'utr wdp FlyBase G25683.1 ACTCCTAAGCGTAAATCTAGTTTAATACCAAAGTTAAAAAAATATAT 77 22298474 0.784598154 4 74 530 0.943820225 1.447158031 0.123595506 0.142857143 0.258426966 77 3 2 84 2R:22298453-22298499 7 wdp FBtr0071850|FBtr0342984|FBtr0071852|FBtr0071849|FBtr0071851 22298212|22298212|22298212|22298212|22298212 22298905|22298905|22298905|22298905|22298905 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 22298443 22298493 3'utr wdp FlyBase G19429.1 AAGCGTAAATCTAGTTTAATACCAAAGTTAAAAAAATATATGCGTTTAAAC 31 22298466 0.952245437 4 30 190 0.977272727 1.633468456 0.068181818 0.290322581 0.5 31 1 0 43 2R:22298443-22298493 7 54 1508 FBgn0034718 26.33333333 1.036666667 1.556666667 2.050632911 52.09003215 34.68950749 1 -7 -3 0.1 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2R 22328788 22328793 + 2R_22328788_22328793_+ 0.999999771 0.999999872 0.999999822 7.07E-08 Gp150 FBtr0071815|FBtr0071813|FBtr0342986|FBtr0342985|FBtr0071816|FBtr0071814 22328523|22328523|22328523|22328523|22328523|22328523 22329416|22329416|22329416|22329416|22329416|22329416 2R + 22328617 22328848 3'utr Gp150 FlyBase G18349.2 AAAGTGGAAAATCACATCAGACAATTGACTAAACACAAGCACAAGAATGTAAGAAACAGGAGGAGGAGCAGTAGGTGGCAGTTAAAAGTATTAGCGAAAGTGCGAGGAAACAAAGCAACAACTAAAAAATACTTGAATCCAAATAAGAGATTGAAAGAGAGAGAATAAATCTTTGACAAAATCCTTTATCCTTGAAATATCCTGTACCATCAAATACTGTTAAGACCAGTCA 339 22328789 0.975198585 24 318 1705 0.945595855 1.717194824 0.098445596 0.109144543 0.21761658 339 15 6 365 2R:22328617-22328848 6 Gp150 FBtr0071814|FBtr0071816|FBtr0342985|FBtr0342986|FBtr0071813|FBtr0071815 22328523|22328523|22328523|22328523|22328523|22328523 22329416|22329416|22329416|22329416|22329416|22329416 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2R + 22328615 22328813 3'utr Gp150 FlyBase G13968.2 AAAAAGTGGAAAATCACATCAGACAATTGACTAAACACAAGCACAAGAATGTAAGAAACAGGAGGAGGAGCAGTAGGTGGCAGTTAAAAGTATTAGCGAAAGTGCGAGGAAACAAAGCAACAACTAAAAAATACTTGAATCCAAATAAGAGATTGAAAGAGAGAGAATAAATCTTTGACAAAATCCTTTATCCTTGAAA 184 22328788 0.973954171 24 168 822 0.928057554 1.566521666 0.133093525 0.375 0.586330935 184 14 6 258 2R:22328615-22328813 6 147 1509 FBgn0013272 4600.843333 132.9433333 202.8033333 0.031950664 1.105734273 0.724840157 -1 0 -0.5 0.1 dme-miR-190-5p 6mer2-7 CATATC 2R 22328968 22328973 + 2R_22328968_22328973_+ 0.999251953 0.999388731 0.999320342 9.67E-05 Gp150 FBtr0071815|FBtr0071813|FBtr0342986|FBtr0342985|FBtr0071816|FBtr0071814 22328523|22328523|22328523|22328523|22328523|22328523 22329416|22329416|22329416|22329416|22329416|22329416 2R + 22328894 22329041 3'utr Gp150 FlyBase G18350.1 GATGAGCAACCGTTTCGAAAGCAACGGATTTGCAATTTATCAAACCTCTGCCCACAATCCGTATCCAATTAGTCCATATCCGGGAACAACTTGAAGATTTAGTGCCATTTTGCCAAAATTCAAACCGAGCGAAAATTACTTAAACACA 49 22328971 0.972487237 17 42 252 0.86440678 1.230448921 0.033898305 0.163265306 0.305084746 49 6 2 51 2R:22328894-22329041 6 Gp150 FBtr0071814|FBtr0071816|FBtr0342985|FBtr0342986|FBtr0071813|FBtr0071815 22328523|22328523|22328523|22328523|22328523|22328523 22329416|22329416|22329416|22329416|22329416|22329416 CATATC 6mer2-7 dme-miR-190-5p 2R + 22328936 22328999 3'utr Gp150 FlyBase G13969.1 AACCTCTGCCCACAATCCGTATCCAATTAGTCCATATCCGGGAACAACTTGAAGATTTAGTGCC 25 22328971 0.935253529 4 24 96 1 1.602059991 0.025 0.32 0.575 25 0 0 40 2R:22328936-22328999 6 24.5 1510 FBgn0013272 4600.843333 132.9433333 202.8033333 0.005325111 0.184289045 0.120806693 -3 -3 -3 0.1 dme-miR-33-5p 6mer3-8 CAATGC 2R 22378402 22378407 + 2R_22378402_22378407_+ 0.783781242 0.99996253 0.891871886 0.152863263 Rtf1 FBtr0342988 22377752 22378484 2R + 22378343 22378467 3'utr Rtf1 FlyBase G18367.1 ATTGAAAGGGTTATATAAGACTCATTCAAGCGAGTATGTATCCGTTGGTTGTAACCGTTCAATGCTGTATTAGATTAAGGCAAAATTCATCAGTTGTAGCAACAGCTTTCATATACTTAAATATA 34 22378406 0.982121753 17 33 259 0.97826087 1.653212514 0.282608696 0.264705882 0.456521739 34 1 0 45 2R:22378343-22378467 6 Rtf1 FBtr0342988 22377752 22378484 CAATGC 6mer3-8 dme-miR-33-5p 2R + 22378378 22378464 3'utr Rtf1 FlyBase G13981.1 ATGTATCCGTTGGTTGTAACCGTTCAATGCTGTATTAGATTAAGGCAAAATTCATCAGTTGTAGCAACAGCTTTCATATACTTAAAT 16 22378405 0.912420192 8 16 124 1 1.301029996 0.15 0.25 0.4 16 0 0 20 2R:22378378-22378464 6 12.5 1511 FBgn0034722 664.7666667 27.26666667 41.77666667 0.01880359 0.458435208 0.299210085 -4 -3 -3.5 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 2R 22425793 22425799 - 2R_22425793_22425799_- 0.782911824 0.711111423 0.747011624 0.05077055 CG10344 FBtr0071840|FBtr0071841 22425731|22425731 22426203|22426021 2R - 22425768 22425819 3'utr CG10344 FlyBase G25719.1 ATGAAAGCACATGCTACCCTGTACAAAAATACCTAAGAGATCTTCCACTTTA 11 22425808 0.954752003 3 11 53 1 1.041392685 0.090909091 0 0 11 0 0 11 2R:22425768-22425819 7 CG10344 FBtr0071841|FBtr0071840 22425731|22425731 22426021|22426203 GTACAAA 7mer-A1 dme-miR-305-5p 2R - 22425791 22425827 3'utr CG10344 FlyBase G19455.1 ATGTTTATATGAAAGCACATGCTACCCTGTACAAAAA 8 22425808 0.93932337 2 8 31 1 1.176091259 0.533333333 0.625 0.8 8 0 0 15 2R:22425791-22425827 7 9 1512 FBgn0034729 69.31 7.356666667 11.47666667 0.129851392 1.223380154 0.784199826 9 9 9 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 22425950 22425955 - 2R_22425950_22425955_- 0.999318394 0.99978926 0.999553827 0.000332977 CG10344 FBtr0071840|FBtr0071840|FBtr0071840|FBtr0071841|FBtr0071841|FBtr0071841 22425731|22425731|22425731|22425731|22425731|22425731 22426203|22426203|22426203|22426021|22426021|22426021 2R - 22425905 22426006 3'utr CG10344 FlyBase G25720.1 AGGATAAATATCTGCTGTGCAGTTCCTACCTGGGGATCCCGTAAATGACTACTGTGACTTTGGCAACCTCTGGCTGGTTAAATGTTAGTCTTAAGATAGTGA 43 22425947 0.979602929 14 41 285 0.961538462 1.397940009 0.096153846 0.139534884 0.288461538 43 1 1 50 2R:22425905-22426006 6 CG10344 FBtr0071841|FBtr0071841|FBtr0071841|FBtr0071840|FBtr0071840|FBtr0071840 22425731|22425731|22425731|22425731|22425731|22425731 22426021|22426021|22426021|22426203|22426203|22426203 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 22425905 22425998 3'utr CG10344 FlyBase G19456.1 TATCTGCTGTGCAGTTCCTACCTGGGGATCCCGTAAATGACTACTGTGACTTTGGCAACCTCTGGCTGGTTAAATGTTAGTCTTAAGATAGTGA 29 22425948 0.983546925 9 27 212 0.930232558 1.602059991 0.046511628 0.379310345 0.581395349 29 3 0 40 2R:22425905-22425998 6 23.5 1513 FBgn0034729 69.31 7.356666667 11.47666667 0.339056413 3.194381513 2.047632878 -8 -7 -7.5 0.1 dme-miR-999-3p 8mer-A1 AGTTAACA 2R 22496708 22496715 - 2R_22496708_22496715_- 0.643926235 0.643926233 0.643926234 0 px FBtr0331941|FBtr0112820|FBtr0071838 22496502|22496502|22496502 22496802|22496802|22496802 2R - 22496680 22496739 3'utr px FlyBase G25726.1 TGAAAGTCGCATCGGATCGGAACTAGTTAACATCTACCTTCAGTAACATTATACTAAGCG 18 22496715 0.692980713 8 16 126 0.9 0.954242509 0.1 0.111111111 0.2 18 1 1 18 2R:22496680-22496739 8 px FBtr0112820|FBtr0071838|FBtr0331941 22496502|22496502|22496502 22496802|22496802|22496802 AGTTAACA 8mer-A1 dme-miR-999-3p 2R - 22496687 22496739 3'utr px FlyBase G19460.1 TGAAAGTCGCATCGGATCGGAACTAGTTAACATCTACCTTCAGTAACATTATA 11 22496715 0.773194885 5 11 68 1 1.278753601 0.368421053 0.454545455 0.684210526 11 0 0 19 2R:22496687-22496739 8 13.5 1514 FBgn0003175 880.3466667 16.72333333 25.61666667 0.015334868 0.807255332 0.527000651 0 0 0 0.1 dme-miR-305-5p 6mer2-7 GTACAA 2R 22563548 22563553 - 2R_22563548_22563553_- 0.999992143 0.999997247 0.999994695 3.61E-06 dnr1 FBtr0071837|FBtr0330229 22563509|22563150 22564119|22564059 2R - 22563535 22563576 3'utr dnr1 FlyBase G25744.1 CTTATACGATGTAGCCCTTGAATGTACAACATAGTTACTTAC 6 22563554 0.861688499 3 6 42 1 0.77815125 0.166666667 0 0 6 0 0 6 2R:22563535-22563576 6 dnr1 FBtr0071837|FBtr0330229 22563509|22563150 22564119|22564059 GTACAA 6mer2-7 dme-miR-305-5p 2R - 22563534 22563577 3'utr dnr1 FlyBase G19472.1 CCTTATACGATGTAGCCCTTGAATGTACAACATAGTTACTTACT 8 22563555 0.84610267 3 8 54 1 1 0.3 0.25 0.4 8 0 0 10 2R:22563534-22563577 6 6 1515 FBgn0260866 45.33333333 1.52 2.263333333 0.132352941 3.947368421 2.65095729 1 2 1.5 0.1 dme-miR-8-3p 6mer2-7 AGTATT 2R 22563863 22563868 - 2R_22563863_22563868_- 0.985574468 0.999999998 0.992787233 0.010200369 dnr1 FBtr0071837|FBtr0330229 22563509|22563150 22564119|22564059 2R - 22563826 22563915 3'utr dnr1 FlyBase G25745.1 AGCGGCGTAGTCAGTCTTTCAAACAATCTTAGCTCTATCTTTACTCAAGTATTCTAGCGACATAAGCAACTGAAACTTTAACTCTAACTC 46 22563861 0.988486033 7 40 406 0.884615385 1.662757832 0.115384615 0.108695652 0.211538462 46 6 0 46 2R:22563826-22563915 6 dnr1 FBtr0071837|FBtr0330229 22563509|22563150 22564119|22564059 AGTATT 6mer2-7 dme-miR-8-3p 2R - 22563832 22563903 3'utr dnr1 FlyBase G19474.1 AGTCTTTCAAACAATCTTAGCTCTATCTTTACTCAAGTATTCTAGCGACATAAGCAACTGAAACTTTAACTC 27 22563861 0.989427262 8 25 242 0.972972973 1.556302501 0.135135135 0.296296296 0.486486486 27 1 0 36 2R:22563832-22563903 6 30.5 1516 FBgn0260866 45.33333333 1.52 2.263333333 0.672794118 20.06578947 13.47569956 -7 -7 -7 0.1 dme-miR-1008-3p 7mer-A1 GCTGTGA 2R 22600273 22600279 + 2R_22600273_22600279_+ 0.817682483 0.818329485 0.818005984 0.000457498 CG4269 FBtr0343001|FBtr0071854|FBtr0343000 22600206|22600206|22600206 22600695|22600336|22600336 2R + 22600252 22600305 3'utr CG4269 FlyBase G18424.1 TTCGCGCTCCTGCATGGATTGGCTGTGATAAACCCACTGTATTTATTTAAATTA 252 22600271 0.767058443 10 232 1885 0.927007299 1.404833717 0.00729927 0.079365079 0.153284672 252 11 9 254 2R:22600252-22600305 7 CG4269 FBtr0071854|FBtr0343000|FBtr0343001 22600206|22600206|22600206 22600336|22600336|22600695 GCTGTGA 7mer-A1 dme-miR-1008-3p 2R + 22600252 22600306 3'utr CG4269 FlyBase G14017.1 TTCGCGCTCCTGCATGGATTGGCTGTGATAAACCCACTGTATTTATTTAAATTAT 137 22600271 0.984321713 8 121 972 0.868932039 1.298610522 0.038834951 0.350364964 0.567961165 137 19 8 179 2R:22600252-22600306 7 192.5 1517 FBgn0034741 15.34666667 2.056666667 3.076666667 12.54344049 93.59805511 62.56771398 2 2 2 0.1 dme-miR-263a-5p 7mer-m1 TGCCATT 2R 22641834 22641840 - 2R_22641834_22641840_- 0.763687762 0.765581598 0.76463468 0.001339119 Ugt58Fa FBtr0345505 22641784 22641949 2R - 22641824 22641872 3'utr Ugt58Fa FlyBase G25776.1 AAGAAAAGCTGAATCATCAGAAAGTTGGTTGCTGCCATTCAAGAAAGTC 18 22641847 0.769249744 5 17 120 1 1.301029996 0 0.111111111 0.2 18 0 0 20 2R:22641824-22641872 7 Ugt58Fa FBtr0345505 22641784 22641949 TGCCATT 7mer-m1 dme-miR-263a-5p 2R - 22641829 22641870 3'utr Ugt58Fa FlyBase G19502.1 GAAAAGCTGAATCATCAGAAAGTTGGTTGCTGCCATTCAAGA 9 22641847 0.708573702 4 8 57 1 1.113943352 0.153846154 0.444444444 0.615384615 9 0 0 13 2R:22641829-22641870 7 12.5 1518 FBgn0040091 525 36.25 55.4 0.023809524 0.344827586 0.225631769 7 7 7 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 22672188 22672195 + 2R_22672188_22672195_+ 0.625349373 0.625359713 0.625354543 7.28E-06 RYBP FBtr0071868|FBtr0345500 22671942|22671942 22673212|22673212 2R + 22672116 22672213 3'utr RYBP FlyBase G18451.1 AAGCCCCCACTAGTTCATGACTTCCAGCCCAGGCCAAGATGGCAAAGCAAAGCGAAGCGACGGCGAGTCGATTGCATTTACACGACGCTCTCCAAATC 80 22672187 0.918998936 3 76 381 0.96039604 1.50965048 0.257425743 0.225 0.386138614 80 2 2 97 2R:22672116-22672213 8 RYBP FBtr0071868|FBtr0345500 22671942|22671942 22673212|22673212 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 22672165 22672215 3'utr RYBP FlyBase G14033.1 AAGCGAAGCGACGGCGAGTCGATTGCATTTACACGACGCTCTCCAAATCCC 24 22672187 0.97069128 2 23 133 0.95 1.579783597 0.225 0.458333333 0.675 24 2 0 38 2R:22672165-22672215 8 35 1519 FBgn0034763 242.2733333 14.13333333 21.79333333 0.144464929 2.476415094 1.605995717 1 1 1 0.1 dme-miR-999-3p 6mer3-8 AGTTAA 2R 22672429 22672434 + 2R_22672429_22672434_+ 0.996773271 0.996208776 0.996491023 0.000399162 RYBP FBtr0071868|FBtr0345500 22671942|22671942 22673212|22673212 2R + 22672422 22672464 3'utr RYBP FlyBase G18454.1 AAGTGCAAGTTAATCTCAATGTTCCACTAGCAGCGCCCATCCC 13 22672431 0.759341852 5 12 76 0.9375 1.176091259 0.0625 0.230769231 0.375 13 1 0 15 2R:22672422-22672464 6 RYBP FBtr0071868|FBtr0345500 22671942|22671942 22673212|22673212 AGTTAA 6mer3-8 dme-miR-999-3p 2R + 22672422 22672466 3'utr RYBP FlyBase G14036.1 AAGTGCAAGTTAATCTCAATGTTCCACTAGCAGCGCCCATCCCCC 8 22672441 0.971807227 3 8 48 1 0.954242509 0.222222222 0.125 0.222222222 8 0 0 9 2R:22672422-22672466 6 8.5 1520 FBgn0034763 242.2733333 14.13333333 21.79333333 0.03508434 0.601415094 0.390027531 -2 -12 -7 0.1 dme-miR-14-3p 8mer-A1 AAGACTGA 2R 22672600 22672607 + 2R_22672600_22672607_+ 0.643565461 0.643565469 0.643565465 0 RYBP FBtr0071868|FBtr0345500 22671942|22671942 22673212|22673212 2R + 22672578 22672695 3'utr RYBP FlyBase G18456.1 TAATTTTAATTTGTTTGTATACAAGACTGATTAAGCGTTACCAACCAGATATAGAGAGGTCCGCACACGCACCCAGCCCGAATCCGATTTTCCTTTTGGTTTACACCCGAGATAGCCT 32 22672609 0.984839309 11 32 254 1 1.556302501 0.222222222 0.125 0.222222222 32 0 0 36 2R:22672578-22672695 8 RYBP FBtr0071868|FBtr0345500 22671942|22671942 22673212|22673212 AAGACTGA 8mer-A1 dme-miR-14-3p 2R + 22672542 22672629 3'utr RYBP FlyBase G14037.1 GAAGAGAGCCACGTAGCTTGGTTGTAGACAATTTGCTAATTTTAATTTGTTTGTATACAAGACTGATTAAGCGTTACCAACCAGATAT 22 22672593 0.991646961 9 17 188 0.806451613 0.795880017 0.096774194 0.318181818 0.516129032 22 3 3 25 2R:22672542-22672629 8 24.5 1521 FBgn0034763 242.2733333 14.13333333 21.79333333 0.101125451 1.733490566 1.124197002 -9 7 -1 0.1 dme-miR-283-5p 8mer-m1 TGATATTT 2R 22685061 22685068 - 2R_22685061_22685068_- 0.553293764 0.549655787 0.551474775 0.002572454 Ppa FBtr0343014 22684953 22687104 2R - 22685006 22685070 3'utr Ppa FlyBase G25789.1 ATTGATATTTCTGTTTTAGGAGGCGCAACCCCCAAAAAATTTGAGCGATACGATGTGGAAGGAGG 12 22685061 0.940690088 5 11 88 0.916666667 1.041392685 0.083333333 0 0 12 1 0 11 2R:22685006-22685070 8 Ppa FBtr0343014 22684953 22687104 TGATATTT 8mer-m1 dme-miR-283-5p 2R - 22685036 22685074 3'utr Ppa FlyBase G19512.1 GACAATTGATATTTCTGTTTTAGGAGGCGCAACCCCCAA 6 22685061 0.994922889 2 4 41 0.777777778 0.84509804 0.666666667 0.333333333 0.555555556 6 2 0 7 2R:22685036-22685074 8 6 1522 FBgn0020257 1130.93 34.32 53.00666667 0.005305368 0.174825175 0.113193309 -7 -7 -7 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 22685402 22685408 - 2R_22685402_22685408_- 0.801179975 0.797488907 0.799334441 0.002610002 Ppa FBtr0343014|FBtr0343014|FBtr0343014 22684953|22684953|22684953 22687104|22687104|22687104 2R - 22685364 22685457 3'utr Ppa FlyBase G25792.1 AGAGAAGGTAACGATTGAAAAGAATACGCGAATTAATTCTTTTTTCTATTGTGATATAAAATGTATTGTATAAAAAAGAACACATAAGCAAGCA 60 22685409 0.993571404 13 51 628 0.844155844 0.967815317 0.064935065 0.233333333 0.402597403 60 6 6 65 2R:22685364-22685457 7 Ppa FBtr0343014|FBtr0343014|FBtr0343014 22684953|22684953|22684953 22687104|22687104|22687104 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 22685361 22685457 3'utr Ppa FlyBase G19514.1 AGAGAAGGTAACGATTGAAAAGAATACGCGAATTAATTCTTTTTTCTATTGTGATATAAAATGTATTGTATAAAAAAGAACACATAAGCAAGCAGCA 49 22685409 0.984489713 12 45 482 0.905405405 1.047923552 0.094594595 0.408163265 0.608108108 49 2 5 67 2R:22685361-22685457 7 41.5 1523 FBgn0020257 1130.93 34.32 53.00666667 0.036695463 1.209207459 0.782920387 1 1 1 0.1 dme-miR-79-3p 7mer-m8 TAGCTTT 2R 22686980 22686986 - 2R_22686980_22686986_- 0.619092025 0.340747589 0.479919807 0.196819213 Ppa FBtr0343014|FBtr0071924 22684953|22685523 22687104|22687104 2R - 22686966 22687046 5'utr Ppa FlyBase G25793.1 ATTCCCAACCATAGATTCCGGGCGGGAAAGAGAGGGCAGACAAGATACACTGAAAACTCATAGCTTTCGTTTGCCATACCA 55 22687000 0.959040854 11 52 256 0.969230769 1.799340549 0.246153846 0.181818182 0.307692308 55 2 0 63 2R:22686966-22687046 7 Ppa FBtr0343014|FBtr0071924 22684953|22685523 22687104|22687104 TAGCTTT 7mer-m8 dme-miR-79-3p 2R - 22686972 22687049 5'utr Ppa FlyBase G19515.1 ATAATTCCCAACCATAGATTCCGGGCGGGAAAGAGAGGGCAGACAAGATACACTGAAAACTCATAGCTTTCGTTTGCC 28 22686977 0.973391808 10 24 130 0.894736842 1.531478917 0.342105263 0.214285714 0.421052632 28 4 0 34 2R:22686972-22687049 7 25.5 1524 FBgn0020257 1130.93 34.32 53.00666667 0.022547815 0.743006993 0.481071563 14 -9 2.5 0.1 dme-miR-34-5p 6mer2-7 ACTGCC 2R 22692827 22692832 - 2R_22692827_22692832_- 0.999998595 0.999998072 0.999998334 3.54E-07 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 2R - 22692787 22692854 3'utr robo FlyBase G25801.1 GAAACCAACTTGCTTGAGTTGAACTGCCCTTCCGTAGCCATATACATATAGAGAAAGCATAGTTGGGT 124 22692825 0.762779106 9 123 868 0.993421053 1.877946952 0.25 0.185483871 0.335526316 124 0 1 151 2R:22692787-22692854 6 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 ACTGCC 6mer2-7 dme-miR-34-5p 2R - 22692766 22692854 3'utr robo FlyBase G19522.1 GAAACCAACTTGCTTGAGTTGAACTGCCCTTCCGTAGCCATATACATATAGAGAAAGCATAGTTGGGTCTGGGTTTTAATAATTAGCAA 83 22692825 0.977956071 10 82 558 0.991735537 1.77815125 0.214876033 0.361445783 0.561983471 83 0 1 120 2R:22692766-22692854 6 96.5 1525 FBgn0005631 940.4766667 16.89666667 25.92333333 0.102607543 5.711185638 3.722515109 -7 -7 -7 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2R 22693464 22693471 - 2R_22693464_22693471_- 0.552364539 0.534108527 0.543236533 0.012908941 robo FBtr0343013|FBtr0343013|FBtr0343013|FBtr0071922|FBtr0071922|FBtr0071922 22692522|22692522|22692522|22692522|22692522|22692522 22694552|22694552|22694552|22694552|22694552|22694552 2R - 22693422 22693574 3'utr robo FlyBase G25805.1 CGAACCAACCCCAGTTGTCCGTTCCGTTGTCCTGTCCCTGTGCAGATCCCTCCAAGACACAATGTTTTCTACAATCTTGCATTTTGAAAAGTCTAAAATGTACCTGTGATATAACCCCATTATACATTATAGTATTTTAATAATTTTTATATT 358 22693475 0.98091123 24 335 2417 0.934831461 2.619093331 0.139325843 0.187150838 0.346067416 358 29 0 416 2R:22693422-22693574 8 robo FBtr0343013|FBtr0343013|FBtr0343013|FBtr0071922|FBtr0071922|FBtr0071922 22692522|22692522|22692522|22692522|22692522|22692522 22694552|22694552|22694552|22694552|22694552|22694552 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 22693434 22693572 3'utr robo FlyBase G19525.1 AACCAACCCCAGTTGTCCGTTCCGTTGTCCTGTCCCTGTGCAGATCCCTCCAAGACACAATGTTTTCTACAATCTTGCATTTTGAAAAGTCTAAAATGTACCTGTGATATAACCCCATTATACATTATAGTATTTTAAT 205 22693476 0.980634727 17 190 1353 0.918918919 1.957447649 0.094594595 0.326829268 0.533783784 205 22 2 272 2R:22693434-22693572 8 246.5 1526 FBgn0005631 940.4766667 16.89666667 25.92333333 0.262101133 14.58867627 9.508808024 4 5 4.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2R 22693884 22693890 - 2R_22693884_22693890_- 0.823349518 0.823349562 0.82334954 7.07E-08 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 2R - 22693859 22693950 3'utr robo FlyBase G25807.1 TGTAGTTAGAACCAAAGTACACCATTTGTACAGCATGTTTTGGGGGCTTTTGAATCGGTCCTAGTCAATAGGCTTGATAGCGATACAATACG 46 22693882 0.980837236 9 43 315 0.967213115 1.770852012 0.229508197 0.260869565 0.442622951 46 2 0 59 2R:22693859-22693950 7 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R - 22693870 22693925 3'utr robo FlyBase G19528.1 TTGTACAGCATGTTTTGGGGGCTTTTGAATCGGTCCTAGTCAATAGGCTTGATAGC 19 22693910 0.743677599 7 18 163 0.961538462 1.096910013 0.076923077 0.315789474 0.5 19 0 1 25 2R:22693870-22693925 7 21.5 1527 FBgn0005631 940.4766667 16.89666667 25.92333333 0.022860748 1.272440324 0.829368651 -8 20 6 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 22694136 22694143 - 2R_22694136_22694143_- 0.500120152 0.500120193 0.500120173 0 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 2R - 22694112 22694297 3'utr robo FlyBase G25808.1 ACTTGTCACAATCATGGGGGCATTGTGCAGCTTTAGCAATTACGAATTTTTCCATTATCACATCTACCAGCGTAGAGACTCATAGACAGGCACAGTGCCCCTTCCCCATCCATGCACCACAGAAATGTTTCCCCAATGGGAAACGAGAACCTTTGTACTTAAGAGACGCGAGTGCTGTACGATAGA 368 22694144 0.961475004 18 354 1902 0.954545455 1.998912904 0.277511962 0.116847826 0.222488038 368 16 3 399 2R:22694112-22694297 8 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 GTACTTAA 8mer-A1 dme-miR-252-5p 2R - 22694116 22694168 3'utr robo FlyBase G19530.1 TCCCCAATGGGAAACGAGAACCTTTGTACTTAAGAGACGCGAGTGCTGTACGA 144 22694144 0.648028922 7 141 760 0.957345972 2.305351369 0.383886256 0.354166667 0.559241706 144 9 0 202 2R:22694116-22694168 8 188.5 1528 FBgn0005631 940.4766667 16.89666667 25.92333333 0.200430278 11.15604656 7.27144143 1 1 1 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 22694494 22694500 - 2R_22694494_22694500_- 0.661615509 0.66161353 0.661614519 1.41E-06 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 2R - 22694421 22694528 3'utr robo FlyBase G25809.1 AATAGGGGGATTAGGATTAAAGATAGCATCTAGTCTAACTCTTCATTCATATCGAACTGGAAATCAGTCTAGGAACTGAGTGAACTCAAAGTTTCTGCATCAGTTATC 53 22694500 0.981465663 10 51 372 0.951612903 1.770852012 0.112903226 0.150943396 0.274193548 53 3 0 59 2R:22694421-22694528 7 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R - 22694467 22694516 3'utr robo FlyBase G19532.1 AGGATTAAAGATAGCATCTAGTCTAACTCTTCATTCATATCGAACTGGAA 22 22694500 0.721435469 4 17 127 0.793103448 1.06069784 0.068965517 0.227272727 0.413793103 22 5 1 23 2R:22694467-22694516 7 32 1529 FBgn0005631 940.4766667 16.89666667 25.92333333 0.034025299 1.893864668 1.234409155 0 0 0 0.1 dme-miR-92b-3p 8mer-m1 GTGCAATT 2R 22801729 22801736 + 2R_22801729_22801736_+ 0.596698356 0.596693995 0.596696175 3.11E-06 blw FBtr0071883 22801691 22802180 2R + 22801691 22801754 stop_codon blw FlyBase G18466.1 AAGCATCAGCAGCAAACGAAGAATAGGAGTAGCGGTGCGTGCAATTAACATCATAGATGGCTCG 21 22801744 0.753714101 6 20 116 0.962962963 1.414973348 0.37037037 0.238095238 0.407407407 21 1 0 26 2R:22801691-22801754 8 blw FBtr0071883 22801691 22802180 GTGCAATT 8mer-m1 dme-miR-92b-3p 2R + 22801709 22801752 3'utr blw FlyBase G14049.1 AAGAATAGGAGTAGCGGTGCGTGCAATTAACATCATAGATGGCT 12 22801744 0.91427173 4 11 68 0.944444444 1.230448921 0.055555556 0.333333333 0.555555556 12 1 0 17 2R:22801709-22801752 8 15 1530 FBgn0011211 3676.656667 198.3566667 303.6133333 0.004079794 0.075621355 0.049404945 -15 -15 -15 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2R 22804138 22804143 - 2R_22804138_22804143_- 0.999998618 0.999998829 0.999998724 1.41E-07 CycB FBtr0309858|FBtr0071911|FBtr0071913|FBtr0071914 22803519|22803519|22803519|22803519 22804293|22804293|22804293|22804293 2R - 22804123 22804179 3'utr CycB FlyBase G25819.1 GCGTATAGTTACCGTAGTCGCATTGCCAACTATCTTTACCTGCATCACCCATCCCTA 51 22804145 0.653371247 8 50 382 0.984615385 1.505149978 0.061538462 0.196078431 0.369230769 51 0 1 64 2R:22804123-22804179 6 CycB FBtr0309858|FBtr0071911|FBtr0071913|FBtr0071914 22803519|22803519|22803519|22803519 22804293|22804293|22804293|22804293 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2R - 22804124 22804167 3'utr CycB FlyBase G19540.1 CGTAGTCGCATTGCCAACTATCTTTACCTGCATCACCCATCCCT 32 22804145 0.632276229 5 27 222 0.844444444 0.880813592 0.088888889 0.34375 0.533333333 32 3 4 38 2R:22804124-22804167 6 38 1531 FBgn0000405 1807.483333 83.51333333 128.11 0.021023707 0.455017163 0.296620092 2 2 2 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 2R 22931818 22931824 + 2R_22931818_22931824_+ 0.521223656 0.521223782 0.521223719 7.07E-08 CG42678 FBtr0345078|FBtr0302769|FBtr0302773|FBtr0345077|FBtr0302768|FBtr0344190|FBtr0302772|FBtr0345079|FBtr0302770|FBtr0302771 22931633|22931278|22931633|22931533|22929536|22931533|22931278|22931633|22931278|22931278 22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044 2R + 22931806 22931843 3'utr CG42678 FlyBase G18491.1 GTGTACTTTGTTTGTGATTCTATTAGAGCTCCGGGCGC 17 22931816 0.618590426 8 16 176 0.818181818 1.255272505 0.181818182 0.176470588 0.363636364 17 4 0 18 2R:22931806-22931843 7 CG42678 FBtr0345077|FBtr0302773|FBtr0302769|FBtr0345078|FBtr0302770|FBtr0302771|FBtr0302772|FBtr0345079|FBtr0344190|FBtr0302768 22931533|22931633|22931278|22931633|22931278|22931278|22931278|22931633|22931533|22929536 22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044 TGTGATT 7mer-m1 dme-miR-308-3p 2R + 22931806 22931826 3'utr CG42678 FlyBase G14067.1 GTGTACTTTGTTTGTGATTCT 5 22931817 0.657456855 3 5 55 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2R:22931806-22931826 7 10.5 1532 FBgn0261564 564.6666667 33.59333333 51.19333333 0.018595041 0.312562016 0.205104831 2 1 1.5 0.1 dme-miR-1012-3p 6mer2-7 TGACTA 2R 22931877 22931882 + 2R_22931877_22931882_+ 0.999862257 1 0.999931129 9.74E-05 CG42678 FBtr0345078|FBtr0302769|FBtr0302773|FBtr0345077|FBtr0302768|FBtr0344190|FBtr0302772|FBtr0345079|FBtr0302770|FBtr0302771 22931633|22931278|22931633|22931533|22929536|22931533|22931278|22931633|22931278|22931278 22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044 2R + 22931847 22931898 3'utr CG42678 FlyBase G18492.1 TCGTCCTGGTTGCCACTGGTACTCATTTCGTGACTAGTTTAGCGTTAAGCGA 7 22931872 0.988352294 3 7 64 1 0.84509804 0 0 0 7 0 0 7 2R:22931847-22931898 6 CG42678 FBtr0345077|FBtr0302773|FBtr0302769|FBtr0345078|FBtr0302770|FBtr0302771|FBtr0302772|FBtr0345079|FBtr0344190|FBtr0302768 22931533|22931633|22931278|22931633|22931278|22931278|22931278|22931633|22931533|22929536 22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044 TGACTA 6mer2-7 dme-miR-1012-3p 2R + 22931846 22931897 3'utr CG42678 FlyBase G14068.1 TTCGTCCTGGTTGCCACTGGTACTCATTTCGTGACTAGTTTAGCGTTAAGCG 7 22931872 0.987490085 5 6 55 1 1.079181246 0.333333333 0.571428571 0.75 7 0 0 12 2R:22931846-22931897 6 5.5 1533 FBgn0261564 564.6666667 33.59333333 51.19333333 0.00974026 0.163722961 0.107435864 5 5 5 0.1 dme-miR-308-3p 8mer-m1 CTGTGATT 2R 22934614 22934621 - 2R_22934614_22934621_- 0.385560641 0.385560589 0.385560615 0 CG3800 FBtr0071994|FBtr0303464 22934567|22934567 22936014|22936014 2R - 22934560 22934651 3'utr CG3800 FlyBase G25898.1 ACGATGAAGGAAATGAAAATTCAAATATCACTGTGATTGTTTTTTAATTGTAAATTAAAATGCTGGAGCTGCTGATTTGAGACAAAAAAAAA 107 22934614 0.985027004 20 98 1119 0.906976744 1.767155866 0.046511628 0.158878505 0.302325581 107 11 1 117 2R:22934560-22934651 8 CG3800 FBtr0071994|FBtr0303464 22934567|22934567 22936014|22936014 CTGTGATT 8mer-m1 dme-miR-308-3p 2R - 22934570 22934638 3'utr CG3800 FlyBase G19600.1 TGAAAATTCAAATATCACTGTGATTGTTTTTTAATTGTAAATTAAAATGCTGGAGCTGCTGATTTGAGA 60 22934614 0.991282586 8 58 624 0.990291262 2.008600172 0.029126214 0.516666667 0.718446602 60 1 0 102 2R:22934570-22934638 8 74 1534 FBgn0034802 11327.54667 555.1 855.97 0.006532747 0.133309314 0.086451628 -7 -7 -7 0.1 dme-miR-1006-3p 7mer-A1 GAATTTA 2R 22935330 22935336 - 2R_22935330_22935336_- 0.823349562 0.823349562 0.823349562 0 CG3800 FBtr0071994|FBtr0303464 22934567|22934567 22936014|22936014 2R - 22935271 22935378 5'utr CG3800 FlyBase G25903.1 TAATTATACCTATATGATTATATGATTATGCTGCAAGTGTTTGAATTTACTAATTACATTATAACGAATGGAATGAAACTATATAAGATTATATAAAGAAAAATACCT 26 22935338 0.986494315 16 23 195 0.892857143 1.397940009 0.178571429 0.076923077 0.142857143 26 3 0 25 2R:22935271-22935378 7 CG3800 FBtr0071994|FBtr0303464 22934567|22934567 22936014|22936014 GAATTTA 7mer-A1 dme-miR-1006-3p 2R - 22935312 22935372 5'utr CG3800 FlyBase G19604.2 TACCTATATGATTATATGATTATGCTGCAAGTGTTTGAATTTACTAATTACATTATAACGA 19 22935339 0.901070562 9 14 164 0.84375 0.954242509 0.28125 0.578947368 0.75 19 3 2 27 2R:22935312-22935372 7 12.5 1535 FBgn0034802 11327.54667 555.1 855.97 0.001103505 0.022518465 0.014603316 2 3 2.5 0.1 dme-miR-2a-2-5p 7mer-A1 GATGAGA 2R 22935431 22935437 - 2R_22935431_22935437_- 0.782911335 0.78291055 0.782910942 5.66E-07 CG3800 FBtr0071994|FBtr0303464 22934567|22934567 22936014|22936014 2R - 22935405 22935548 5'utr CG3800 FlyBase G25904.1 AGAAGACGATAGCCAACGGCAGCTGTGCAGCCGAGAGAGCAGATGACACCGACGACGAGGAAGAGGATGAGGTAGAAGATGAGGAAGAAGACACGACGACCCAATTTGTAAGATGAGACTAAACCACAACAGCAACAACAAAAG 363 22935435 0.938356045 12 352 1369 0.96912114 2.309630167 0.104513064 0.14600551 0.263657957 363 12 1 408 2R:22935405-22935548 7 CG3800 FBtr0071994|FBtr0303464 22934567|22934567 22936014|22936014 GATGAGA 7mer-A1 dme-miR-2a-2-5p 2R - 22935394 22935548 5'utr CG3800 FlyBase G19605.1 AGAAGACGATAGCCAACGGCAGCTGTGCAGCCGAGAGAGCAGATGACACCGACGACGAGGAAGAGGATGAGGTAGAAGATGAGGAAGAAGACACGACGACCCAATTTGTAAGATGAGACTAAACCACAACAGCAACAACAAAAGAAATCACCAAG 241 22935435 0.930028914 11 233 846 0.971910112 2.539076099 0.070224719 0.340248963 0.553370787 241 10 0 346 2R:22935394-22935548 7 284 1536 FBgn0034802 11327.54667 555.1 855.97 0.025071625 0.511619528 0.331787329 -2 -2 -2 0.1 dme-miR-980-3p 6mer2-7 GCAGCT 2R 22938801 22938806 + 2R_22938801_22938806_+ 0.999999602 0.99999999 0.999999796 2.83E-07 CG9849 FBtr0302895|FBtr0071951 22938783|22938783 22939025|22939025 2R + 22938764 22938822 stop_codon CG9849 FlyBase G18494.1 CCGCCGTGGCTGGGCTGGTGACGTGATCGGATTACATGCAGCTCAAAGGACTCGTGTGA 22 22938800 0.857419269 5 21 132 0.958333333 1.361727836 0.208333333 0.090909091 0.166666667 22 1 0 23 2R:22938764-22938822 6 CG9849 FBtr0302895|FBtr0071951 22938783|22938783 22939025|22939025 GCAGCT 6mer2-7 dme-miR-980-3p 2R + 22938779 22938822 stop_codon CG9849 FlyBase G14069.1 TGGTGACGTGATCGGATTACATGCAGCTCAAAGGACTCGTGTGA 9 22938800 0.785550638 3 9 48 1 1.322219295 0.238095238 0.777777778 0.904761905 9 0 0 21 2R:22938779-22938822 6 14.5 1537 FBgn0034803 110.3333333 14.92666667 22.72333333 0.13141994 0.971415811 0.638110606 1 1 1 0.1 dme-miR-8-3p 6mer2-7 AGTATT 2R 23061899 23061904 - 2R_23061899_23061904_- 0.982707974 0.918993547 0.95085076 0.045052955 l(2)06496 FBtr0336732|FBtr0071985 23061418|23061418 23061931|23061931 2R - 23061894 23061937 stop_codon l(2)06496 FlyBase G25914.1 GATTGAGCGGATATAGATCCAAAGACTGCTGAAAGTATTTTATA 36 23061908 0.766403908 8 34 163 0.951219512 1.290034611 0.292682927 0.138888889 0.243902439 36 1 1 39 2R:23061894-23061937 6 l(2)06496 FBtr0071985 23061418 23061931 AGTATT 6mer2-7 dme-miR-8-3p 2R - 23061881 23061933 stop_codon l(2)06496 FlyBase G19613.1 GAGCGGATATAGATCCAAAGACTGCTGAAAGTATTTTATACGACCCCGTTTCC 29 23061908 0.966433693 6 24 127 0.76744186 0.6734159 0.279069767 0.344827586 0.558139535 29 4 6 33 2R:23061881-23061933 6 19.5 1538 FBgn0010622 174.3333333 19.28333333 29.72666667 0.111854685 1.011235955 0.655976676 4 4 4 0.1 dme-bantam-3p 6mer3-8 TGATCT 2R 23071694 23071699 + 2R_23071694_23071699_+ 1 1 1 0 l(2)k09913 FBtr0071960|FBtr0343188|FBtr0343192|FBtr0071959|FBtr0343191|FBtr0071961|FBtr0343189|FBtr0343190|FBtr0071958 23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554 23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875 2R + 23071539 23071725 stop_codon l(2)k09913 FlyBase G18510.1 AGCGCGCCAAGTTGTAGGTGTCTCTAACGAGGAGCGGCTGATCAGTTCAGTGATATACATTTATTCAAGAATCAATGCGATTATGATTTTACCCTAGTTGCTAAGACCTAAAGATTAACGAGCAATGTAAAACCAATGTCCTCTTTGAATGATTATGATCTGTGTGTCTCTCGCGAGGCAGAATCTT 284 23071694 0.986472032 37 272 2343 0.964391691 2.034762106 0.228486647 0.151408451 0.284866469 284 10 2 325 2R:23071539-23071725 6 l(2)k09913 FBtr0071961|FBtr0343191|FBtr0343190|FBtr0071958|FBtr0343189|FBtr0343188|FBtr0071960|FBtr0071959|FBtr0343192 23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554 23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875 TGATCT 6mer3-8 dme-bantam-3p 2R + 23071564 23071722 3'utr l(2)k09913 FlyBase G14081.1 AACGAGGAGCGGCTGATCAGTTCAGTGATATACATTTATTCAAGAATCAATGCGATTATGATTTTACCCTAGTTGCTAAGACCTAAAGATTAACGAGCAATGTAAAACCAATGTCCTCTTTGAATGATTATGATCTGTGTGTCTCTCGCGAGGCAGAAT 168 23071694 0.893394118 23 159 1351 0.940677966 2.346352974 0.266949153 0.297619048 0.5 168 14 0 222 2R:23071564-23071722 6 112 1539 FBgn0021979 722.6 59.48666667 89.72333333 0.154995848 1.882774852 1.248281755 0 0 0 0.1 dme-miR-304-5p 6mer3-8 TGAGAT 2R 23071823 23071828 + 2R_23071823_23071828_+ 0.999995851 0.999991959 0.999993905 2.76E-06 l(2)k09913 FBtr0071960|FBtr0343188|FBtr0343192|FBtr0071959|FBtr0343191|FBtr0071961|FBtr0343189|FBtr0343190|FBtr0071958 23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554 23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875 2R + 23071771 23071849 3'utr l(2)k09913 FlyBase G18511.1 TTCATCAACCGAGAGAAGAATGCACTACGCCTCTATATTGTTACATATATTTTGAGATCGCTGCAAAACAGCTAAATAA 23 23071822 0.972095263 4 23 141 1 1.431363764 0.185185185 0.130434783 0.259259259 23 0 0 27 2R:23071771-23071849 6 l(2)k09913 FBtr0071961|FBtr0343191|FBtr0343190|FBtr0071958|FBtr0343189|FBtr0343188|FBtr0071960|FBtr0071959|FBtr0343192 23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554 23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875 TGAGAT 6mer3-8 dme-miR-304-5p 2R + 23071807 23071848 3'utr l(2)k09913 FlyBase G14083.1 ATTGTTACATATATTTTGAGATCGCTGCAAAACAGCTAAATA 14 23071822 0.703581161 3 13 108 0.95 1.278753601 0 0.428571429 0.6 14 1 0 19 2R:23071807-23071848 6 13.5 1540 FBgn0021979 722.6 59.48666667 89.72333333 0.018682535 0.226941612 0.150462533 1 1 1 0.1 dme-bantam-3p 7mer-m8 TGATCTC 2R 23355188 23355194 + 2R_23355188_23355194_+ 0.633640141 0.622012711 0.627826426 0.008221813 CG30409 FBtr0072004|FBtr0305674 23354922|23354922 23355321|23355321 2R + 23355169 23355208 5'utr CG30409 FlyBase G18522.1 AAATCCCGCACCGGCGGCTTGATCTCTGTGACATTGAAGT 14 23355187 0.790699754 3 13 80 0.9375 1.176091259 0.25 0.142857143 0.25 14 1 0 15 2R:23355169-23355208 7 CG30409 FBtr0305674|FBtr0072004 23354922|23354922 23355321|23355321 TGATCTC 7mer-m8 dme-bantam-3p 2R + 23355170 23355200 5'utr CG30409 FlyBase G14091.1 AATCCCGCACCGGCGGCTTGATCTCTGTGAC 11 23355187 0.71377672 3 11 58 1 1.255272505 0.722222222 0.545454545 0.722222222 11 0 0 18 2R:23355170-23355200 7 12.5 1541 FBgn0050409 2.333333333 0.296666667 0.423333333 5.357142857 42.13483146 29.52755906 1 1 1 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 23356109 23356116 + 2R_23356109_23356116_+ 0.625364225 0.625364248 0.625364237 0 Rpi FBtr0301852|FBtr0305675 23356078|23356078 23356192|23356441 2R + 23356082 23356152 3'utr Rpi FlyBase G18526.1 CTTGGGCGGAGTTGGGGGAGCGCTTTTTGCATTTATGTTTCACCAAGTTGTTCCTTAAATTTTAGGTTTGC 41 23356108 0.74232017 10 41 406 1 1.698970004 0.08 0.195121951 0.34 41 0 0 50 2R:23356082-23356152 8 Rpi FBtr0305675 23356078 23356441 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 23356078 23356153 stop_codon Rpi FlyBase G14095.1 AGTTCTTGGGCGGAGTTGGGGGAGCGCTTTTTGCATTTATGTTTCACCAAGTTGTTCCTTAAATTTTAGGTTTGCC 41 23356108 0.736360172 10 40 419 1 1.785329835 0.098360656 0.317073171 0.540983607 41 0 0 61 2R:23356078-23356153 8 27 1542 FBgn0050410 217.7933333 24.45 37.62 0.123970737 1.104294479 0.717703349 1 1 1 0.1 dme-miR-968-5p 6mer2-7 CTACTT 2R 23371601 23371606 - 2R_23371601_23371606_- 0.966108713 0.967427987 0.96676835 0.000932886 Golgin245 FBtr0072036 23371358 23371842 2R - 23371447 23371614 3'utr Golgin245 FlyBase G25951.1 AAGTATAGCTACTTCTGTCCAAATCCACGCTAAGCACTTTTGTACATTTTGATTACGCTTTCCTTTGTTTCATTCACTTGCTTGCGCTCCATGTCCCATGTCCACGACTTACCTTAACCCCAGCCTAACCTAAGTGCAATCGTTTTGTGTATTTTAGTTGTAAGTTTA 334 23371602 0.850153201 24 329 2448 0.985185185 2.2999429 0.111111111 0.173652695 0.318518519 334 5 1 399 2R:23371447-23371614 6 Golgin245 FBtr0072036 23371358 23371842 CTACTT 6mer2-7 dme-miR-968-5p 2R - 23371485 23371615 3'utr Golgin245 FlyBase G19638.1 TAAGTATAGCTACTTCTGTCCAAATCCACGCTAAGCACTTTTGTACATTTTGATTACGCTTTCCTTTGTTTCATTCACTTGCTTGCGCTCCATGTCCCATGTCCACGACTTACCTTAACCCCAGCCTAACC 179 23371602 0.897360209 14 179 1190 1 2.456366033 0.059440559 0.430167598 0.643356643 179 0 0 286 2R:23371485-23371615 6 200 1543 FBgn0034854 1865.833333 44.14333333 67.57666667 0.10719071 4.530695462 2.95960144 -4 -4 -4 0.1 dme-miR-1008-3p 6mer3-8 AGCTGT 2R 23385930 23385935 - 2R_23385930_23385935_- 0.991231206 0.996500375 0.99386579 0.003725887 CG30415 FBtr0072030|FBtr0072031 23385676|23385462 23385977|23385977 2R - 23385882 23385981 stop_codon CG30415 FlyBase G25969.1 CTAGGCGGCCAGTAACTTAGTCTTAATTGTCGCATCAACATTTCAGAGCTGTTTGTGTCGGACCCAACGTGAAATCGGCGAATAAATGATTTGAAACGAG 27 23385928 0.980755482 12 25 176 0.9375 1 0.15625 0.185185185 0.3125 27 0 2 30 2R:23385882-23385981 6 CG30415 FBtr0072031|FBtr0072030 23385462|23385676 23385977|23385977 AGCTGT 6mer3-8 dme-miR-1008-3p 2R - 23385884 23385950 3'utr CG30415 FlyBase G19654.1 GCATCAACATTTCAGAGCTGTTTGTGTCGGACCCAACGTGAAATCGGCGAATAAATGATTTGAAACG 15 23385928 0.988338566 7 12 112 0.857142857 1.255272505 0.380952381 0.333333333 0.523809524 15 3 0 18 2R:23385884-23385950 6 14.5 1544 FBgn0250838 841 182.8166667 280.3366667 0.017241379 0.079314432 0.051723523 -7 -7 -7 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 2R 23389315 23389320 - 2R_23389315_23389320_- 0.99962726 1 0.99981363 0.000263539 CG3530 FBtr0112940|FBtr0072028|FBtr0072029 23389007|23389007|23389007 23389520|23389520|23389520 2R - 23389282 23389351 3'utr CG3530 FlyBase G25973.1 ATCCACCAGCGATTGGCTTCCAGGCATCGTCCTAGTCTATAAGCCGGGCACAAAACTGTATTTTGTTATT 7 23389339 0.965256377 4 7 40 1 0.954242509 0.111111111 0.142857143 0.333333333 7 0 0 9 2R:23389282-23389351 6 CG3530 FBtr0072029|FBtr0112940|FBtr0072028 23389007|23389007|23389007 23389520|23389520|23389520 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 2R - 23389271 23389344 3'utr CG3530 FlyBase G19656.1 AGCGATTGGCTTCCAGGCATCGTCCTAGTCTATAAGCCGGGCACAAAACTGTATTTTGTTATTAGAATCTAGAG 12 23389314 0.975351629 7 12 75 1 1.146128036 0.285714286 0.166666667 0.285714286 12 0 0 14 2R:23389271-23389344 6 7.5 1545 FBgn0028497 778.9933333 33.31 50.96666667 0.00962781 0.22515761 0.147155003 19 -6 6.5 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 2R 23421617 23421622 - 2R_23421617_23421622_- 0.810256503 0.837001442 0.823628973 0.0189115 CG9815 FBtr0072024|FBtr0113111|FBtr0343264|FBtr0343263 23421519|23421519|23421519|23421519 23421708|23421708|23421708|23421708 2R - 23421522 23421688 3'utr CG9815 FlyBase G25981.1 AGTAGTTGTGCGTGAATGTTGTAATTTCTGTCAGTGTATGTGCATTTTGACCCTTGTGATATATGTATGTGACTTTGCTGTAAGCCTAGACTAAGGATATTTATGTCCAGCCACAAGAAAATTCCAAAAAAATATTAGAATGTAGAATAAATGTTATGTGTAAAATC 617 23421615 0.964558232 35 572 5619 0.918421053 1.889612913 0.269736842 0.183144246 0.336842105 617 54 8 698 2R:23421522-23421688 6 CG9815 FBtr0343264|FBtr0343263|FBtr0072024|FBtr0113111 23421519|23421519|23421519|23421519 23421708|23421708|23421708|23421708 ATGTGA 6mer3-8 dme-miR-1003-3p 2R - 23421588 23421688 3'utr CG9815 FlyBase G19659.2 AGTAGTTGTGCGTGAATGTTGTAATTTCTGTCAGTGTATGTGCATTTTGACCCTTGTGATATATGTATGTGACTTTGCTGTAAGCCTAGACTAAGGATATT 441 23421615 0.72630689 27 401 4102 0.911504425 1.790988475 0.315634218 0.410430839 0.616519174 441 51 9 618 2R:23421588-23421688 6 346 1546 FBgn0034861 0 0 0 Inf Inf Inf -7 -7 -7 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2R 23491136 23491141 + 2R_23491136_23491141_+ 0.99998943 0.999900511 0.999944971 6.29E-05 CG43795 FBtr0331989 23490922 23491997 2R + 23491100 23491158 3'utr CG43795 FlyBase G18552.1 CGAAAATGTTTTATGCTTAGGCCAGTTGAATTATCAAAGACTTTACTAAATTATATTTG 21 23491143 0.984930478 9 20 163 0.962962963 1.414973348 0.185185185 0.238095238 0.407407407 21 1 0 26 2R:23491100-23491158 6 CG43795 FBtr0331989 23490922 23491997 AAGACT 6mer3-8 dme-miR-14-3p 2R + 23491096 23491157 3'utr CG43795 FlyBase G14108.1 CAATCGAAAATGTTTTATGCTTAGGCCAGTTGAATTATCAAAGACTTTACTAAATTATATTT 18 23491144 0.984776396 6 18 149 1 1.380211242 0.041666667 0.222222222 0.416666667 18 0 0 24 2R:23491096-23491157 6 17.5 1547 FBgn0264339 32.66666667 0.67 1.033333333 0.535714286 26.11940299 16.93548387 -7 -8 -7.5 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 2R 23519884 23519890 - 2R_23519884_23519890_- 0.782056849 0.782848154 0.782452501 0.000559604 RabX1 FBtr0072120 23519837 23520357 2R - 23519848 23519910 3'utr RabX1 FlyBase G25992.1 TAACACAAACACCAATTCATGTACAAAGCATTTTATACTGCATGCCTATAATAAATGTAAATG 15 23519895 0.953792759 4 15 71 1 1.255272505 0 0.133333333 0.277777778 15 0 0 18 2R:23519848-23519910 7 RabX1 FBtr0072120 23519837 23520357 GTACAAA 7mer-A1 dme-miR-305-5p 2R - 23519852 23519906 3'utr RabX1 FlyBase G19668.1 ACAAACACCAATTCATGTACAAAGCATTTTATACTGCATGCCTATAATAAATGTA 10 23519894 0.923300996 6 10 45 1 1.176091259 0 0.2 0.466666667 10 0 0 15 2R:23519852-23519906 7 11 1548 FBgn0015372 359.1933333 26.49333333 40.52 0.030624176 0.415198792 0.271470879 5 4 4.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 23520325 23520330 - 2R_23520325_23520330_- 0.99744614 0.963394768 0.980420454 0.024077905 RabX1 FBtr0072120|FBtr0072120|FBtr0072120 23519837|23519837|23519837 23520357|23520357|23520357 2R - 23520282 23520358 stop_codon RabX1 FlyBase G25994.1 AGATCTATCAGATCCCCAGGATCCACATCTGTGAAAGAACCAATGTGATTTTAACAGAACCAGACTGCAGTTCGAAT 103 23520331 0.784510395 9 101 434 1 2.064457989 0.25 0.106796117 0.206896552 103 0 0 116 2R:23520282-23520358 6 RabX1 FBtr0072120|FBtr0072120|FBtr0072120 23519837|23519837|23519837 23520357|23520357|23520357 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 23520274 23520352 3'utr RabX1 FlyBase G19671.1 ATCAGATCCCCAGGATCCACATCTGTGAAAGAACCAATGTGATTTTAACAGAACCAGACTGCAGTTCGAATATGGGCTC 80 23520331 0.943054685 11 80 352 1 2.113943352 0.192307692 0.4375 0.653846154 80 0 0 130 2R:23520274-23520352 6 72.5 1549 FBgn0015372 359.1933333 26.49333333 40.52 0.201841163 2.736537494 1.789239882 1 1 1 0.1 dme-miR-33-5p 8mer-A1 CAATGCAA 2R 23528178 23528185 + 2R_23528178_23528185_+ 0.63455168 0.634552204 0.634551942 3.54E-07 mi FBtr0072058 23527637 23528260 2R + 23528153 23528205 3'utr mi FlyBase G18577.1 TTTACTTAACTACCGCACGAGTACTCAATGCAACTGAAATTAAGCTGAAGCAA 27 23528177 0.752974174 8 26 134 0.96969697 1.505149978 0.393939394 0.185185185 0.333333333 27 1 0 32 2R:23528153-23528205 8 mi FBtr0072058 23527637 23528260 CAATGCAA 8mer-A1 dme-miR-33-5p 2R + 23528160 23528199 3'utr mi FlyBase G14126.1 AACTACCGCACGAGTACTCAATGCAACTGAAATTAAGCTG 23 23528177 0.666945338 7 22 80 0.967741935 1.477121255 0.258064516 0.304347826 0.483870968 23 1 0 30 2R:23528160-23528199 8 25 1550 FBgn0261786 586.8166667 18.49 28.43 0.042602744 1.352082207 0.879352796 1 1 1 0.1 dme-miR-33-5p 7mer-A1 AATGCAA 2R 23544848 23544854 - 2R_23544848_23544854_- 0.78276153 0.782762735 0.782762132 8.49E-07 wmd FBtr0113112|FBtr0072114 23544821|23544821 23545063|23545063 2R - 23544832 23544920 3'utr wmd FlyBase G25995.1 TATTCCAACGCTGAACTCTCTCATTGGCATTAAATGATAATCACAACACACAAAACTACATTGTGAAATGCAATAGAAATAAATAACTT 42 23544860 0.838011463 8 40 220 0.963636364 1.423245874 0.127272727 0.238095238 0.418181818 42 1 1 53 2R:23544832-23544920 7 wmd FBtr0113112|FBtr0072114 23544821|23544821 23545063|23545063 AATGCAA 7mer-A1 dme-miR-33-5p 2R - 23544832 23544921 3'utr wmd FlyBase G19673.1 ATATTCCAACGCTGAACTCTCTCATTGGCATTAAATGATAATCACAACACACAAAACTACATTGTGAAATGCAATAGAAATAAATAACTT 29 23544860 0.713735031 9 29 152 1 1.681241237 0.104166667 0.448275862 0.666666667 29 0 0 48 2R:23544832-23544921 7 21 1551 FBgn0034876 541.5 41.29666667 63.21666667 0.038781163 0.508515619 0.332190878 6 6 6 0.1 dme-miR-8-3p 7mer-m8 CAGTATT 2R 23598763 23598769 + 2R_23598763_23598769_+ 0.661615243 0.661615243 0.661615243 0 apt FBtr0072069|FBtr0072067|FBtr0332926|FBtr0072068|FBtr0072066|FBtr0072070 23598526|23598526|23598526|23598526|23598526|23598526 23599526|23599526|23599526|23599526|23599526|23599526 2R + 23598741 23598784 3'utr apt FlyBase G18592.1 AGACATTCCTGGCATTGTTGATCAGTATTTGAAAGCTAGAAGCG 10 23598761 0.725171402 4 10 98 1 1 0.5 0 0 10 0 0 10 2R:23598741-23598784 7 apt FBtr0072066|FBtr0072070|FBtr0332926|FBtr0072068|FBtr0072069|FBtr0072067 23598526|23598526|23598526|23598526|23598526|23598526 23599526|23599526|23599526|23599526|23599526|23599526 CAGTATT 7mer-m8 dme-miR-8-3p 2R + 23598749 23598775 3'utr apt FlyBase G14139.1 CTGGCATTGTTGATCAGTATTTGAAAG 8 23598762 0.730993826 2 6 60 0.75 0.954242509 0.083333333 0.5 0.666666667 8 3 0 9 2R:23598749-23598775 7 9 1552 FBgn0015903 402.1966667 17.62666667 27.31666667 0.022377112 0.510590015 0.329469189 2 1 1.5 0.1 dme-miR-1003-3p 7mer-m8 ATGTGAG 2R 23679150 23679156 + 2R_23679150_23679156_+ 0.539925018 0.671795994 0.605860506 0.093246878 Pde8 FBtr0344184|FBtr0344179|FBtr0344182|FBtr0344178|FBtr0344183|FBtr0344177|FBtr0344176 23678688|23678688|23678688|23678688|23678688|23678688|23678688 23680017|23680017|23680844|23680844|23680844|23680017|23680017 2R + 23679125 23679177 3'utr Pde8 FlyBase G18601.1 ATTTCTATATATAACTATATAAACCATGTGAGTCTGTGTGTGCGTGAGTGTGT 13 23679160 0.988846229 6 10 102 0.833333333 1.176091259 0.611111111 0.307692308 0.5 13 3 0 15 2R:23679125-23679177 7 Pde8 FBtr0344182|FBtr0344178|FBtr0344183|FBtr0344176|FBtr0344177|FBtr0344184|FBtr0344179 23678688|23678688|23678688|23678688|23678688|23678688|23678688 23680844|23680844|23680844|23680017|23680017|23680017|23680017 ATGTGAG 7mer-m8 dme-miR-1003-3p 2R + 23679137 23679169 3'utr Pde8 FlyBase G14146.1 AACTATATAAACCATGTGAGTCTGTGTGTGCGT 9 23679153 0.742106882 4 8 62 0.941176471 1.204119983 0.705882353 0.555555556 0.764705882 9 1 0 16 2R:23679137-23679169 7 10.5 1553 FBgn0266377 2144.47 62.20666667 95.11333333 0.004896315 0.168792198 0.110394617 -10 -3 -6.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG 2R 23679333 23679339 + 2R_23679333_23679339_+ 0.702958693 0.702966147 0.70296242 5.23E-06 Pde8 FBtr0344184|FBtr0344179|FBtr0344182|FBtr0344178|FBtr0344183|FBtr0344177|FBtr0344176 23678688|23678688|23678688|23678688|23678688|23678688|23678688 23680017|23680017|23680844|23680844|23680844|23680017|23680017 2R + 23679294 23679355 3'utr Pde8 FlyBase G18602.1 CACAGCATATTGACCAGATCATATGGCGTGCGCTCCACTGTACCTGGCAACGGTATAATGTA 163 23679332 0.968632819 5 158 876 0.97311828 2.257678575 0.123655914 0.128834356 0.23655914 163 5 0 181 2R:23679294-23679355 7 Pde8 FBtr0344182|FBtr0344178|FBtr0344183|FBtr0344176|FBtr0344177|FBtr0344184|FBtr0344179 23678688|23678688|23678688|23678688|23678688|23678688|23678688 23680844|23680844|23680844|23680017|23680017|23680017|23680017 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" 2R + 23679305 23679350 3'utr Pde8 FlyBase G14147.1 GACCAGATCATATGGCGTGCGCTCCACTGTACCTGGCAACGGTATA 102 23679332 0.806597499 4 99 550 0.967320261 2.170261715 0.124183007 0.401960784 0.60130719 102 5 0 148 2R:23679305-23679350 7 131 1554 FBgn0266377 2144.47 62.20666667 95.11333333 0.061087355 2.105883614 1.377304269 1 1 1 0.1 dme-miR-12-5p 6mer2-7 ATACTC 2R 23699399 23699404 - 2R_23699399_23699404_- 0.767151267 0.999996432 0.883573849 0.164646349 CG4091 FBtr0072097|FBtr0072096|FBtr0072098 23698947|23698947|23698947 23699964|23699964|23699964 2R - 23699375 23699423 3'utr CG4091 FlyBase G26028.1 ATTCGTGGTCTACTTTTTGATACTCCCAAACTCGCTGTGTGCACCCGCA 19 23699406 0.815683846 6 17 115 0.916666667 1.342422681 0.166666667 0.210526316 0.375 19 2 0 22 2R:23699375-23699423 6 CG4091 FBtr0072096|FBtr0072098|FBtr0072097 23698947|23698947|23698947 23699964|23699964|23699964 ATACTC 6mer2-7 dme-miR-12-5p 2R - 23699368 23699422 3'utr CG4091 FlyBase G19695.1 TTCGTGGTCTACTTTTTGATACTCCCAAACTCGCTGTGTGCACCCGCAAGTAACT 10 23699407 0.987895681 5 10 79 1 1.230448921 0.529411765 0.4 0.647058824 10 0 0 17 2R:23699368-23699422 6 12.5 1555 FBgn0034894 369.3166667 23.85666667 36.49333333 0.033846293 0.523962554 0.342528316 2 3 2.5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 2R 23699570 23699575 - 2R_23699570_23699575_- 0.997760806 0.96932591 0.983543358 0.020106511 CG4091 FBtr0072097|FBtr0072096|FBtr0072098 23698947|23698947|23698947 23699964|23699964|23699964 2R - 23699517 23699603 3'utr CG4091 FlyBase G26029.1 ATAATTAGGAAGAACCAAATGCATTTCGCCAAAGGAATTCACTAAACGGAAATTGTAAACTCGAGCAAAATGCTTTTATCGGTGTGT 16 23699582 0.718025162 10 13 79 0.777777778 1.146128036 0.055555556 0.125 0.222222222 16 4 0 14 2R:23699517-23699603 6 CG4091 FBtr0072096|FBtr0072098|FBtr0072097 23698947|23698947|23698947 23699964|23699964|23699964 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 23699520 23699597 3'utr CG4091 FlyBase G19696.1 AGGAAGAACCAAATGCATTTCGCCAAAGGAATTCACTAAACGGAAATTGTAAACTCGAGCAAAATGCTTTTATCGGTG 8 23699566 0.999137843 4 7 24 1 1 0.1 0.125 0.3 8 0 0 10 2R:23699520-23699597 6 6.5 1556 FBgn0034894 369.3166667 23.85666667 36.49333333 0.017600072 0.272460528 0.178114724 7 -9 -1 0.1 dme-miR-92b-3p 7mer-m1 TGCAATT 2R 23699934 23699940 - 2R_23699934_23699940_- 0.669369273 0.632025445 0.650697359 0.026406125 CG4091 FBtr0072097|FBtr0072096|FBtr0072098 23698947|23698947|23698947 23699964|23699964|23699964 2R - 23699906 23699952 3'utr CG4091 FlyBase G26031.1 AGCGAGCTGAGCTGCAATTGCGTGCTATGAACGAAAGGCTATATATC 6 23699935 0.972921211 5 6 37 1 0.77815125 0.333333333 0 0 6 0 0 6 2R:23699906-23699952 7 CG4091 FBtr0072096|FBtr0072098|FBtr0072097 23698947|23698947|23698947 23699964|23699964|23699964 TGCAATT 7mer-m1 dme-miR-92b-3p 2R - 23699906 23699953 3'utr CG4091 FlyBase G19698.1 AAGCGAGCTGAGCTGCAATTGCGTGCTATGAACGAAAGGCTATATATC 7 23699935 0.969706042 4 7 37 1 1.113943352 0.153846154 0.857142857 0.923076923 7 0 0 13 2R:23699906-23699953 7 5 1557 FBgn0034894 369.3166667 23.85666667 36.49333333 0.013538517 0.209585022 0.137011326 -5 -5 -5 0.1 dme-miR-33-5p 8mer-A1 CAATGCAA 2R 23735298 23735305 - 2R_23735298_23735305_- 0.632161264 0.630639749 0.631400507 0.001075934 egl FBtr0114586|FBtr0343272 23734902|23734902 23735574|23735574 2R - 23735294 23735324 3'utr egl FlyBase G26042.1 AACAATCGACAAATCGTGGCAATGCAATCTT 7 23735309 0.680310251 3 6 36 0.875 0.84509804 0 0.142857143 0.25 7 1 0 7 2R:23735294-23735324 8 egl FBtr0114586|FBtr0343272 23734902|23734902 23735574|23735574 CAATGCAA 8mer-A1 dme-miR-33-5p 2R - 23735289 23735325 3'utr egl FlyBase G19706.1 TAACAATCGACAAATCGTGGCAATGCAATCTTACCGA 8 23735309 0.70124795 5 8 43 1 1.204119983 0 0.75 0.875 8 0 0 16 2R:23735289-23735325 8 7.5 1558 FBgn0000562 583.3166667 16.09333333 24.84 0.01285751 0.466031483 0.301932367 4 4 4 0.1 dme-miR-304-5p 6mer3-8 TGAGAT 2R 23811416 23811421 - 2R_23811416_23811421_- 1 0.999981503 0.999990751 1.31E-05 Nxt1 FBtr0343270 23811319 23811686 2R - 23811371 23811506 3'utr Nxt1 FlyBase G26072.1 ACGCAAATTTCAGCAGACTTTCATCGTTACCGCCGAGAATGATAAATGGAAGGTCGTCTCCGATTGCTACCGAATGCAGGAGGTCTGAGATCCACACACTTGTATTTTAAGCTAAGCTAAAGTTCTTACGTCGTAA 17 23811405 0.973029836 10 17 101 1 1.361727836 0.173913043 0.235294118 0.434782609 17 0 0 23 2R:23811371-23811506 6 Nxt1 FBtr0343270 23811319 23811686 TGAGAT 6mer3-8 dme-miR-304-5p 2R - 23811370 23811435 3'utr Nxt1 FlyBase G19726.1 GAATGCAGGAGGTCTGAGATCCACACACTTGTATTTTAAGCTAAGCTAAAGTTCTTACGTCGTAAC 11 23811405 0.967848707 5 11 61 1 1.255272505 0.611111111 0.272727273 0.555555556 11 0 0 18 2R:23811370-23811435 6 5 1559 FBgn0028411 120.6666667 31.62 48.83333333 0.041436464 0.158127767 0.102389078 -16 -16 -16 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2R 23812252 23812257 - 2R_23812252_23812257_- 0.999948573 0.999991254 0.999969913 3.02E-05 CG4797 FBtr0072239|FBtr0072239|FBtr0072239 23812183|23812183|23812183 23812425|23812425|23812425 2R - 23812233 23812281 3'utr CG4797 FlyBase G26074.1 AAATGTTAGGTTACCAATTCAAATTGTGATCGCTATGCTTTAAATTGTG 76 23812258 0.781653802 9 75 656 0.975903614 1.908485019 0.108433735 0.092105263 0.168674699 76 2 0 81 2R:23812233-23812281 6 CG4797 FBtr0072239|FBtr0072239|FBtr0072239 23812183|23812183|23812183 23812425|23812425|23812425 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 23812236 23812281 3'utr CG4797 FlyBase G19729.1 AAATGTTAGGTTACCAATTCAAATTGTGATCGCTATGCTTTAAATT 54 23812258 0.759231431 8 52 467 0.977777778 1.467361417 0.2 0.462962963 0.677777778 54 0 2 88 2R:23812236-23812281 6 65 1560 FBgn0034909 31.51666667 1.766666667 2.636666667 2.062400846 36.79245283 24.65233881 1 1 1 0.1 dme-miR-276a-3p 6mer3-8 AGTTCC 2R 23841612 23841617 - 2R_23841612_23841617_- 0.999984661 0.999978215 0.999981438 4.60E-06 shu FBtr0072237 23841459 23841694 2R - 23841528 23841669 3'utr shu FlyBase G26083.1 ATATTTCATATCTTACTCAAAAAAAAAAACATACCAAACATGAAGGTAATTTAGTTCCAAGTTCTAGAAGAGCAGTATCATTAGTTATTTCGATATTAGCAACATGAATATCGTAAGCCCAGACGAATGTTAACGTTTTTTG 171 23841619 0.983912788 14 166 1308 0.974226804 1.975431809 0.128865979 0.116959064 0.221649485 171 4 1 189 2R:23841528-23841669 6 shu FBtr0072237 23841459 23841694 AGTTCC 6mer3-8 dme-miR-276a-3p 2R - 23841592 23841651 3'utr shu FlyBase G19735.1 AAAAAAAAAAACATACCAAACATGAAGGTAATTTAGTTCCAAGTTCTAGAAGAGCAGTAT 102 23841619 0.986593798 7 91 743 0.920529801 2.1430148 0.185430464 0.392156863 0.589403974 102 12 0 139 2R:23841592-23841651 6 113.5 1561 FBgn0003401 190.3333333 13.83333333 21.23 0.596322242 8.204819277 5.346208196 2 2 2 0.1 dme-miR-317-3p 8mer-A1 TGTGTTCA 2R 23846904 23846911 + 2R_23846904_23846911_+ 0.631136752 0.631136737 0.631136745 7.07E-08 CG5554 FBtr0343273|FBtr0072126 23846588|23846588 23847024|23847024 2R + 23846848 23846924 3'utr CG5554 FlyBase G18643.1 AACTAAATGTAACTTTAGTCGTATATTTTTACCTTTTGCCAAGCATTTTTGTATTTTGTGTTCAACTTGGTTTCCAC 46 23846903 0.993718318 9 45 576 0.966666667 1.763427994 0.15 0.239130435 0.416666667 46 2 0 58 2R:23846848-23846924 8 CG5554 FBtr0343273|FBtr0072126 23846588|23846588 23847024|23847024 TGTGTTCA 8mer-A1 dme-miR-317-3p 2R + 23846864 23846925 3'utr CG5554 FlyBase G14184.1 AGTCGTATATTTTTACCTTTTGCCAAGCATTTTTGTATTTTGTGTTCAACTTGGTTTCCACA 31 23846903 0.711980043 6 30 344 0.973684211 1.568201724 0.236842105 0.193548387 0.342105263 31 1 0 37 2R:23846864-23846925 8 33 1562 FBgn0034914 870.3333333 68.06 104.0466667 0.037916507 0.484866294 0.317165375 1 1 1 0.1 dme-miR-965-3p 7mer-m8 TACGCTT 2R 23848341 23848347 - 2R_23848341_23848347_- 0.620204855 0.620204849 0.620204852 7.07E-08 ytr FBtr0343278|FBtr0072234 23847159|23847159 23848456|23848456 2R - 23848292 23848393 3'utr ytr FlyBase G26096.1 CGCCATCGCAGCAGCCACATCCTTTTCCGTTGCCCAACTAGTTTGCTACGCTTTTTTACTTGTCCGTGCCCAATGGGCAATGGGCGGCGGACGAAGACCTGC 53 23848340 0.984032123 9 51 402 0.939393939 1.190331698 0.060606061 0.20754717 0.363636364 53 1 3 62 2R:23848292-23848393 7 ytr FBtr0343278|FBtr0072234 23847159|23847159 23848456|23848456 TACGCTT 7mer-m8 dme-miR-965-3p 2R - 23848336 23848386 3'utr ytr FlyBase G19741.2 GCAGCAGCCACATCCTTTTCCGTTGCCCAACTAGTTTGCTACGCTTTTTTA 18 23848339 0.933267857 9 17 168 0.96 1.079181246 0.04 0.222222222 0.44 18 0 1 24 2R:23848336-23848386 7 19.5 1563 FBgn0021895 420.7166667 24.65 37.71666667 0.046349483 0.791075051 0.517012815 -7 -8 -7.5 0.1 dme-miR-79-3p 6mer3-8 TAGCTT 2R 23859488 23859493 - 2R_23859488_23859493_- 0.994666816 0.887203114 0.940934965 0.075988311 TBPH FBtr0089626 23859328 23859744 2R - 23859463 23859555 stop_codon TBPH FlyBase G26105.1 CTTTCTTTAAGGCGGTGCCTGTCACCCAATGATGTGGTTAATGTGGTTAACCAACACCTCTGTAGCTTACTTAAATTTACATATATGTATTCC 33 23859495 0.982081056 11 32 242 0.976190476 1.612783857 0.071428571 0.151515152 0.333333333 33 1 0 41 2R:23859463-23859555 6 TBPH FBtr0089626 23859328 23859744 TAGCTT 6mer3-8 dme-miR-79-3p 2R - 23859484 23859546 stop_codon TBPH FlyBase G19747.1 AGGCGGTGCCTGTCACCCAATGATGTGGTTAATGTGGTTAACCAACACCTCTGTAGCTTACTT 13 23859495 0.888250542 6 11 87 0.9 1.255272505 0.15 0.384615385 0.6 13 2 0 18 2R:23859484-23859546 6 11 1564 FBgn0025790 517.66 26.73666667 41.05666667 0.021249469 0.411420022 0.267922384 2 2 2 0.1 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 2R 23866617 23866623 + 2R_23866617_23866623_+ 0.620204031 0.620204031 0.620204031 0 CG5569 FBtr0072128 23866579 23866654 2R + 23866593 23866641 3'utr CG5569 FlyBase G18658.1 ACATCTAATGATTGTTTGAAAGGCTGGTGCTCTGTTAGAAATTAAACTG 27 23866618 0.753833411 8 26 220 0.965517241 1.146128036 0.172413793 0.074074074 0.137931034 27 0 1 28 2R:23866593-23866641 7 CG5569 FBtr0072128 23866579 23866654 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 2R + 23866598 23866641 3'utr CG5569 FlyBase G14196.1 TAATGATTGTTTGAAAGGCTGGTGCTCTGTTAGAAATTAAACTG 19 23866620 0.681212384 6 17 144 0.931034483 1.130333768 0.137931034 0.421052632 0.620689655 19 1 1 27 2R:23866598-23866641 7 23 1565 FBgn0034919 94.64666667 15.64666667 23.91333333 0.243009086 1.469961653 0.961806524 -1 -3 -2 0.1 dme-miR-1006-3p 6mer2-7 GAATTT 2R 23876883 23876888 + 2R_23876883_23876888_+ 0.999466368 0.999999995 0.999733181 0.000377312 ken FBtr0072129 23876776 23877442 2R + 23876657 23876928 stop_codon ken FlyBase G18667.1 TACGGAGAACCGGTACAGCTGCTGCTTCTGCTCCATGTGCTTCGAGTCGGTACAGGAGCTCGTCCGTCACCTGTCCGGCCACCACAATAACCTGCTGCTGACAAAGAATCTGCGCGAATAGTGTCCCGGGCATCGGCAACCGCATAATCCGAGAGTATCCCATCTGTCCGATCCGATCCAAGTCGATCCGAGGTGATTCGCCGGACGGACAATTGCAAAGAGACCTGAATTTTAAATAGTAGCAGTAGCAGATTTAATTGCCTATTGTATAA 284 23876886 0.891365903 38 264 1475 0.92816092 1.554960013 0.16954023 0.183098592 0.333333333 284 17 8 323 2R:23876657-23876928 6 ken FBtr0072129 23876776 23877442 GAATTT 6mer2-7 dme-miR-1006-3p 2R + 23876658 23876907 stop_codon ken FlyBase G14206.1 ACGGAGAACCGGTACAGCTGCTGCTTCTGCTCCATGTGCTTCGAGTCGGTACAGGAGCTCGTCCGTCACCTGTCCGGCCACCACAATAACCTGCTGCTGACAAAGAATCTGCGCGAATAGTGTCCCGGGCATCGGCAACCGCATAATCCGAGAGTATCCCATCTGTCCGATCCGATCCAAGTCGATCCGAGGTGATTCGCCGGACGGACAATTGCAAAGAGACCTGAATTTTAAATAGTAGCAGTAGCAG 246 23876886 0.96674328 34 225 1214 0.926229508 1.831229694 0.144808743 0.345528455 0.56010929 246 23 4 339 2R:23876658-23876907 6 145 1566 FBgn0011236 845.1733333 33.37333333 51.22333333 0.171562441 4.344786256 2.830741199 -3 -3 -3 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2R 23877307 23877312 + 2R_23877307_23877312_+ 0.999998735 0.999998836 0.999998785 7.07E-08 ken FBtr0072129 23876776 23877442 2R + 23877234 23877339 3'utr ken FlyBase G18671.1 TGTCTATACGAGAGGTATTTTAATTGCTATTGTATTTCCAACTCGTCTAGCATGAACTTCATGGCCCAAACTTGTACCTATATCTACATTTTTGATAGTTTTGATA 222 23877306 0.980806451 16 213 1585 0.969465649 2.103803721 0.022900763 0.153153153 0.282442748 222 7 1 254 2R:23877234-23877339 6 ken FBtr0072129 23876776 23877442 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2R + 23877257 23877337 3'utr ken FlyBase G14210.1 TTGCTATTGTATTTCCAACTCGTCTAGCATGAACTTCATGGCCCAAACTTGTACCTATATCTACATTTTTGATAGTTTTGA 138 23877306 0.787548952 10 134 931 1 2.334453751 0.046296296 0.427536232 0.634259259 138 0 0 216 2R:23877257-23877337 6 161.5 1567 FBgn0011236 845.1733333 33.37333333 51.22333333 0.191085063 4.839192968 3.152860025 1 1 1 0.1 dme-miR-34-5p 7mer-A1 ACTGCCA 2R 23896809 23896815 + 2R_23896809_23896815_+ 0.809801226 0.823236411 0.816518818 0.009500121 CG17658 FBtr0072133 23896698 23896997 2R + 23896789 23896827 3'utr CG17658 FlyBase G18680.1 ATATTCTAAGTTACCTGATTACTGCCACAAGTATCAAGT 7 23896807 0.972159745 2 7 47 1 1.176091259 0.333333333 0.571428571 0.8 7 0 0 15 2R:23896789-23896827 7 CG17658 FBtr0072133 23896698 23896997 ACTGCCA 7mer-A1 dme-miR-34-5p 2R + 23896789 23896861 3'utr CG17658 FlyBase G14216.1 ATATTCTAAGTTACCTGATTACTGCCACAAGTATCAAGTTAGATGCATTAAAACTACCCAAGACTGTAGAATA 10 23896807 0.857858643 4 10 58 1 1.255272505 0.111111111 0.5 0.722222222 10 0 0 18 2R:23896789-23896861 7 6 1568 FBgn0034924 26.68 1.76 2.723333333 0.224887556 3.409090909 2.203182375 2 2 2 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 23896961 23896966 - 2R_23896961_23896966_- 0.999992896 1 0.999996448 5.02E-06 CG5339 FBtr0072220 23896894 23897117 2R - 23896930 23896983 3'utr CG5339 FlyBase G26145.1 TTTATTCTTAAAGAATTACCAAAAATGTAAATGGATAAACAAACATGTTTAAAT 11 23896967 0.985968869 2 9 77 0.846153846 1.041392685 0 0.181818182 0.307692308 11 2 0 11 2R:23896930-23896983 6 CG5339 FBtr0072220 23896894 23897117 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 23896940 23896974 3'utr CG5339 FlyBase G19772.1 AAAGAATTACCAAAAATGTAAATGGATAAACAAAC 5 23896967 0.614491343 3 4 22 1 0.903089987 0 0.4 0.625 5 0 0 8 2R:23896940-23896974 6 7.5 1569 FBgn0034925 184.9866667 18.32333333 27.93333333 0.040543463 0.409314171 0.26849642 1 1 1 0.1 dme-miR-277-3p 7mer-A1 GCATTTA 2R 23897022 23897028 - 2R_23897022_23897028_- 0.797236395 0.813738787 0.805487591 0.011668959 CG5339 FBtr0072220 23896894 23897117 2R - 23896994 23897098 3'utr CG5339 FlyBase G26146.1 AAAAAGAACCCTTCTGAAGTTATTGTAACCGTTTTCCTCGTAGAGTTAAGTGGCTGCATTGAGAAACTGAGCATTTATACTTATTACAAATGTAGGCTATCAACT 30 23897031 0.957571383 15 29 229 0.96969697 1.505149978 0.242424242 0.1 0.181818182 30 1 0 32 2R:23896994-23897098 7 CG5339 FBtr0072220 23896894 23897117 GCATTTA 7mer-A1 dme-miR-277-3p 2R - 23896996 23897098 3'utr CG5339 FlyBase G19773.1 AAAAAGAACCCTTCTGAAGTTATTGTAACCGTTTTCCTCGTAGAGTTAAGTGGCTGCATTGAGAAACTGAGCATTTATACTTATTACAAATGTAGGCTATCAA 14 23897031 0.978847474 9 14 97 1 1.301029996 0.1 0.285714286 0.5 14 0 0 20 2R:23896996-23897098 7 10.5 1570 FBgn0034925 184.9866667 18.32333333 27.93333333 0.056760848 0.57303984 0.375894988 3 3 3 0.1 dme-miR-932-5p 7mer-A1 GAATTGA 2R 23928036 23928042 - 2R_23928036_23928042_- 0.774267614 0.78938744 0.781827527 0.010691313 Ca-P60A FBtr0072216 23927480 23929230 2R - 23928027 23928109 3'utr Ca-P60A FlyBase G26161.1 TCTATAGAATACCTACTTAAATTAACATTATACATAATTTACTCTGTTATACAATTAGAGACGCTGTGAATTGATTAAACAAA 38 23928055 0.792681964 11 33 252 0.862745098 1.166331422 0.078431373 0.210526316 0.411764706 38 5 2 44 2R:23928027-23928109 7 Ca-P60A FBtr0072216 23927480 23929230 GAATTGA 7mer-A1 dme-miR-932-5p 2R - 23928025 23928087 3'utr Ca-P60A FlyBase G19785.1 TAACATTATACATAATTTACTCTGTTATACAATTAGAGACGCTGTGAATTGATTAAACAAAAA 36 23928039 0.941945151 8 33 224 0.945454545 1.716003344 0.036363636 0.388888889 0.6 36 3 0 52 2R:23928025-23928087 7 31 1571 FBgn0263006 3996.03 108.55 166.07 0.0077577 0.285582681 0.186668272 13 -3 5 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 2R 23928916 23928921 - 2R_23928916_23928921_- 1 1 1 0 Ca-P60A FBtr0072216 23927480 23929230 2R - 23928902 23928945 3'utr Ca-P60A FlyBase G26166.1 CGTATACCCTACCCTATAGATATCTGTGTTTGTATATTACTATA 17 23928923 0.780194526 7 15 169 0.916666667 1.342422681 0.041666667 0.411764706 0.583333333 17 2 0 22 2R:23928902-23928945 6 Ca-P60A FBtr0072216 23927480 23929230 TGTGTT 6mer3-8 dme-miR-317-3p 2R - 23928906 23928945 3'utr Ca-P60A FlyBase G19788.2 CGTATACCCTACCCTATAGATATCTGTGTTTGTATATTAC 12 23928915 0.680136648 5 9 110 0.833333333 1.176091259 0 0.333333333 0.555555556 12 3 0 15 2R:23928906-23928945 6 12.5 1572 FBgn0263006 3996.03 108.55 166.07 0.003128105 0.115154307 0.075269465 2 -6 -2 0.1 dme-bantam-3p 6mer3-8 TGATCT 2R 23937288 23937293 - 2R_23937288_23937293_- 1 0.999928663 0.999964332 5.04E-05 CG3735 FBtr0343280 23937075 23937467 2R - 23937276 23937317 3'utr CG3735 FlyBase G26189.1 TTTAGGAGGAACTGGCTAGGTGATTGATCTGATGTTAAGGGT 8 23937297 0.865217589 5 8 59 1 0.903089987 0.125 0 0 8 0 0 8 2R:23937276-23937317 6 CG3735 FBtr0343280 23937075 23937467 TGATCT 6mer3-8 dme-bantam-3p 2R - 23937275 23937319 3'utr CG3735 FlyBase G19804.1 ATTTTAGGAGGAACTGGCTAGGTGATTGATCTGATGTTAAGGGTG 17 23937294 0.726474016 5 16 121 1 1.414973348 0.230769231 0.294117647 0.538461538 17 0 0 26 2R:23937275-23937319 6 12 1573 FBgn0034933 271.7233333 14.71 22.62666667 0.044162567 0.815771584 0.530347672 4 1 2.5 0.1 dme-miR-980-5p 6mer3-8 GAAAAA 2R 23942064 23942069 + 2R_23942064_23942069_+ 0.984830892 0.993223343 0.989027117 0.005934323 Tal FBtr0072141 23942013 23942114 2R + 23942063 23942091 3'utr Tal FlyBase G18711.1 TGAAAAAGACAATGATTTTATACTTTAAT 6 23942076 0.975254404 4 6 37 1 0.77815125 0 0 0 6 0 0 6 2R:23942063-23942091 6 Tal FBtr0072141 23942013 23942114 GAAAAA 6mer3-8 dme-miR-980-5p 2R + 23942033 23942093 3'utr Tal FlyBase G14240.1 TAGCAGGTGGAGGATGAATACATTCGTTTTTGAAAAAGACAATGATTTTATACTTTAATAA 5 23942075 0.989014265 3 5 43 1 0.903089987 0 0.2 0.5 5 0 0 8 2R:23942033-23942093 6 4 1574 FBgn0023477 409 45.06666667 68.61 0.009779951 0.088757396 0.058300539 -12 -11 -11.5 0.1 dme-miR-33-5p 7mer-A1 AATGCAA 2R 23946765 23946771 + 2R_23946765_23946771_+ 0.782911782 0.782672793 0.782792287 0.000168999 Galphas FBtr0072142|FBtr0343279|FBtr0072143|FBtr0072144|FBtr0301411 23946746|23946746|23946746|23946746|23946746 23946936|23946936|23946936|23946936|23946936 2R + 23946691 23946809 stop_codon Galphas FlyBase G18722.1 AATGATTGCAGAGACATTATTCAAAGGATGCACCTTCGTCAATATGAATTGTTATAGGTTATCCCCATCGCCGTAATGCAAGTAAATAAAAATATTAATGACTTACTGTTTTAAATATA 21 23946785 0.985666685 13 18 151 0.909090909 1.301029996 0.181818182 0.047619048 0.090909091 21 2 0 20 2R:23946691-23946809 7 Galphas FBtr0072144|FBtr0072143|FBtr0343279|FBtr0072142|FBtr0301411 23946746|23946746|23946746|23946746|23946746 23946936|23946936|23946936|23946936|23946936 AATGCAA 7mer-A1 dme-miR-33-5p 2R + 23946696 23946808 stop_codon Galphas FlyBase G14246.1 TTGCAGAGACATTATTCAAAGGATGCACCTTCGTCAATATGAATTGTTATAGGTTATCCCCATCGCCGTAATGCAAGTAAATAAAAATATTAATGACTTACTGTTTTAAATAT 13 23946764 0.973314139 7 13 84 1 1.301029996 0.1 0.384615385 0.6 13 0 0 20 2R:23946696-23946808 7 4 1575 FBgn0001123 1422.84 105.62 161.5433333 0.002811279 0.037871615 0.024761158 -20 1 -9.5 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 23946865 23946872 + 2R_23946865_23946872_+ 0.625280774 0.624632674 0.624956724 0.000458276 Galphas FBtr0072142|FBtr0343279|FBtr0072143|FBtr0072144|FBtr0301411 23946746|23946746|23946746|23946746|23946746 23946936|23946936|23946936|23946936|23946936 2R + 23946851 23946892 3'utr Galphas FlyBase G18723.1 AACAAAAAATTCGCTGCATTTAGATCTGGTATGACCTTTCAC 7 23946863 0.856928223 6 6 45 0.933333333 1.146128036 0.133333333 0.571428571 0.8 7 1 0 14 2R:23946851-23946892 8 Galphas FBtr0072144|FBtr0072143|FBtr0343279|FBtr0072142|FBtr0301411 23946746|23946746|23946746|23946746|23946746 23946936|23946936|23946936|23946936|23946936 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 23946854 23946881 3'utr Galphas FlyBase G14247.1 AAAAAATTCGCTGCATTTAGATCTGGTA 5 23946860 0.837023196 3 4 34 0.666666667 0.77815125 0 0.4 0.666666667 5 3 0 6 2R:23946854-23946881 8 5.5 1576 FBgn0001123 1422.84 105.62 161.5433333 0.003865508 0.052073471 0.034046592 2 5 3.5 0.1 dme-miR-14-3p 6mer2-7 AGACTG 2R 23985196 23985201 - 2R_23985196_23985201_- 0.999910455 0.999920856 0.999915655 7.35E-06 Phm FBtr0072203 23985173 23985526 2R - 23985134 23985221 3'utr Phm FlyBase G26210.3 ATTCCACTACGCAGTAAATGAGACTGCTCCGACGTAAATATTTTCAATGCAAAGCATTTATTCTCGCGTTTTTTGTATGTATATAGAA 90 23985203 0.960679406 9 88 382 0.979591837 1.982271233 0.163265306 0.077777778 0.153061224 90 2 0 96 2R:23985134-23985221 6 Phm FBtr0072203 23985173 23985526 AGACTG 6mer2-7 dme-miR-14-3p 2R - 23985149 23985220 3'utr Phm FlyBase G19823.1 TTCCACTACGCAGTAAATGAGACTGCTCCGACGTAAATATTTTCAATGCAAAGCATTTATTCTCGCGTTTTT 50 23985203 0.941227515 8 49 198 0.986842105 1.574031268 0.171052632 0.42 0.618421053 50 0 1 75 2R:23985149-23985220 6 65 1577 FBgn0019948 999.0666667 82.65666667 126.22 0.065060723 0.78638545 0.514973855 2 2 2 0.1 dme-miR-999-3p 6mer3-8 AGTTAA 2R 24020022 24020027 - 2R_24020022_24020027_- 0.989918768 0.975031012 0.98247489 0.010527264 CG3907 FBtr0072195|FBtr0072196 24019896|24019896 24020237|24020237 2R - 24019974 24020109 3'utr CG3907 FlyBase G26229.1 GAAAACTGCAATGTACATATGGTTCGAAGAGCTATTTAACTTAATGACAATTTATAGGATGACGATGTGCACGTGTGATTTCAGTTAAGCAGTTAAGTTTAGAAAGAGTAAATGTACATATGGGGGGGGCGAAGTA 426 24020030 0.979985828 21 408 3226 0.958 1.777245526 0.354 0.143192488 0.27 426 14 7 479 2R:24019974-24020109 6 CG3907 FBtr0072195|FBtr0072196 24019896|24019896 24020237|24020237 AGTTAA 6mer3-8 dme-miR-999-3p 2R - 24019923 24020128 3'utr CG3907 FlyBase G19835.1 AATTACATTTATTGCACACGAAAACTGCAATGTACATATGGTTCGAAGAGCTATTTAACTTAATGACAATTTATAGGATGACGATGTGCACGTGTGATTTCAGTTAAGCAGTTAAGTTTAGAAAGAGTAAATGTACATATGGGGGGGGCGAAGTAAGTGTAAGTCCAACATTATTCACTTTAGATACACGATATGTATTTTATTTG 350 24020030 0.982182462 23 344 2560 0.987084871 2.126293791 0.348708487 0.394285714 0.608856089 350 4 3 535 2R:24019923-24020128 6 267 1578 FBgn0034958 1493.146667 107.1866667 164.3533333 0.178816995 2.490981465 1.624548736 3 3 3 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 24020208 24020213 - 2R_24020208_24020213_- 0.999999946 0.999999944 0.999999945 0 CG3907 FBtr0072195|FBtr0072196 24019896|24019896 24020237|24020237 2R - 24020149 24020323 lincRNA_intron-lincRNA_exon CG3907 FlyBase G26230.1 AGCCCGAAGCGATTGCCGTCAAGCAGGAAGTCATAAAGCCGTCTGCAAATGCTACAGTGAAGCTTCAGGAATCCTTGAAGCTGTAAGCTGCTGCATTGCTGCGTTGTATTACCAAATTTGTTCGATTCCGTATTTAGCCATTAAGACCTCATGGATTCCATGTGTCCGAGTTACA 83 24020198 0.881809046 27 78 648 0.951923077 1.995635195 0.201923077 0.192771084 0.355769231 83 5 0 99 2R:24020149-24020323 6 CG3907 FBtr0072195|FBtr0072196 24019896|24019896 24020237|24020237 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 24020142 24020252 stop_codon CG3907 FlyBase G19836.1 TCCTTGAAGCTGTAAGCTGCTGCATTGCTGCGTTGTATTACCAAATTTGTTCGATTCCGTATTTAGCCATTAAGACCTCATGGATTCCATGTGTCCGAGTTACAGCCAACG 48 24020206 0.931047451 19 45 409 0.972222222 1.84509804 0.277777778 0.291666667 0.527777778 48 2 0 70 2R:24020142-24020252 6 27.5 1579 FBgn0034958 1493.146667 107.1866667 164.3533333 0.018417481 0.256561761 0.167322435 -15 -7 -11 0.1 dme-miR-34-5p 6mer2-7 ACTGCC 2R 24031590 24031595 - 2R_24031590_24031595_- 0.737419167 0.677993157 0.707706162 0.042020528 Chi FBtr0072192|FBtr0072191 24031536|24031536 24031803|24031803 2R - 24031578 24031625 3'utr Chi FlyBase G26246.1 AAACCGTAGGATACTTCTGTTCTTGTCTTGACTGCCTTGCAAAGTACT 29 24031599 0.650413198 8 26 273 0.921052632 1.544068044 0.078947368 0.24137931 0.421052632 29 3 0 35 2R:24031578-24031625 6 Chi FBtr0072192|FBtr0072191 24031536|24031536 24031803|24031803 ACTGCC 6mer2-7 dme-miR-34-5p 2R - 24031560 24031613 3'utr Chi FlyBase G19846.1 ACTTCTGTTCTTGTCTTGACTGCCTTGCAAAGTACTTAATGTGTTGTTTTAGTA 25 24031600 0.970228801 9 23 252 0.897435897 1.544068044 0.179487179 0.44 0.641025641 25 4 0 35 2R:24031560-24031613 6 25.5 1580 FBgn0013764 624.9866667 35.29333333 53.78666667 0.04080087 0.722516056 0.474095191 4 5 4.5 0.1 dme-miR-305-5p 7mer-m1 GTACAAT 2R 24044373 24044379 + 2R_24044373_24044379_+ 0.765586551 0.765586663 0.765586607 7.07E-08 IntS1 FBtr0072168 24044337 24044458 2R + 24044344 24044384 3'utr IntS1 FlyBase G18814.2 CGGTCTATAAGTTAGAACCGTCATCATATGTACAATGTAAT 10 24044369 0.597909211 5 9 57 1 1.113943352 0.153846154 0.3 0.461538462 10 0 0 13 2R:24044344-24044384 7 IntS1 FBtr0072168 24044337 24044458 GTACAAT 7mer-m1 dme-miR-305-5p 2R + 24044353 24044384 3'utr IntS1 FlyBase G14309.1 AGTTAGAACCGTCATCATATGTACAATGTAAT 8 24044368 0.640308137 3 8 54 1 1.041392685 0.090909091 0.25 0.454545455 8 0 0 11 2R:24044353-24044384 7 8 1581 FBgn0034964 864.9966667 16.29666667 25.03666667 0.009248591 0.490897934 0.319531354 4 5 4.5 0.1 dme-miR-282-5p 7mer-A1 GAGGCTA 2R 24052999 24053005 + 2R_24052999_24053005_+ 0.82324224 0.823247131 0.823244685 3.46E-06 sei FBtr0343342|FBtr0072169|FBtr0072170 24052939|24052939|24052939 24053035|24053035|24053035 2R + 24052982 24053014 3'utr sei FlyBase G18820.1 TGTGCACAAGCTGTTGCGAGGCTAAAGAGCGAA 21 24052996 0.707925865 2 21 71 1 1.361727836 0.304347826 0.047619048 0.130434783 21 0 0 23 2R:24052982-24053014 7 sei FBtr0072170|FBtr0343342|FBtr0072169 24052939|24052939|24052939 24053035|24053035|24053035 GAGGCTA 7mer-A1 dme-miR-282-5p 2R + 24052982 24053015 3'utr sei FlyBase G14312.1 TGTGCACAAGCTGTTGCGAGGCTAAAGAGCGAAA 17 24052996 0.721416372 2 17 62 1 1.380211242 0.666666667 0.411764706 0.583333333 17 0 0 24 2R:24052982-24053015 7 19 1582 FBgn0003353 165.25 6.316666667 9.546666667 0.114977307 3.007915567 1.990223464 3 3 3 0.1 dme-bantam-3p 8mer-A1 TGATCTCA 2R 24089378 24089385 + 2R_24089378_24089385_+ 0.631136381 0.631136374 0.631136378 0 snama FBtr0307174 24089270 24089512 2R + 24089309 24089420 3'utr snama FlyBase G18849.1 GATCGAGTCAAGTGTCGAGGCCACTGGAACTCCGAGGTGTTGACGAGTCCATACGCAGCCGGTCCTGCCTGATCTCAATATTTTTAAGTTCCAACAGAGACTATACACACAC 48 24089376 0.982996232 13 45 341 0.927272727 1.40654018 0.054545455 0.145833333 0.254545455 48 3 1 51 2R:24089309-24089420 8 snama FBtr0307174 24089270 24089512 TGATCTCA 8mer-A1 dme-bantam-3p 2R + 24089337 24089420 3'utr snama FlyBase G14345.1 ACTCCGAGGTGTTGACGAGTCCATACGCAGCCGGTCCTGCCTGATCTCAATATTTTTAAGTTCCAACAGAGACTATACACACAC 27 24089377 0.987153797 7 23 201 0.844444444 1.579783597 0 0.481481481 0.688888889 27 7 0 38 2R:24089337-24089420 8 27.5 1583 FBgn0086129 1271.946667 47.64 73.46 0.021620403 0.577246012 0.37435339 2 1 1.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 24127704 24127710 - 2R_24127704_24127710_- 0.661615511 0.656755118 0.659185315 0.003436822 tamo FBtr0072282|FBtr0072281|FBtr0343438 24126636|24126636|24127142 24127812|24127812|24127812 2R - 24127677 24127745 3'utr tamo FlyBase G26309.1 ACGACCAATGTAAGCCTGTGCGCGTGTCTCTAAGATCTAGTCTCGATCGAAGTCGTCGTTCGATGGCAG 22 24127710 0.674359391 9 19 141 0.870967742 1.431363764 0.290322581 0.363636364 0.548387097 22 4 0 27 2R:24127677-24127745 7 tamo FBtr0072282|FBtr0072281|FBtr0343438 24126636|24126636|24127142 24127812|24127812|24127812 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R - 24127655 24127745 3'utr tamo FlyBase G19899.1 ACGACCAATGTAAGCCTGTGCGCGTGTCTCTAAGATCTAGTCTCGATCGAAGTCGTCGTTCGATGGCAGGCAGCCCTTTGTCATCCGCATT 14 24127710 0.877752855 8 12 103 0.888888889 0.903089987 0.333333333 0.142857143 0.333333333 14 1 1 16 2R:24127655-24127745 7 8.5 1584 FBgn0041582 428.8966667 12.44 19.01333333 0.019818293 0.683279743 0.447054698 0 0 0 0.1 dme-miR-1008-3p 6mer3-8 AGCTGT 2R 24177180 24177185 + 2R_24177180_24177185_+ 0.999998513 0.999999868 0.999999191 9.90E-07 Nop60B FBtr0300861|FBtr0100213|FBtr0300227 24177104|24177104|24177104 24186343|24186343|24186343 2R + 24177104 24177279 stop_codon Nop60B FlyBase G18885.1 AGGAATCAGAAGTTTCTATAGGATTAGGTTTTAAAGAGAATTCTACGCTTTTTTGTAGAGGCACCTACCGATTGCTAGCTGTTAGGTTTAAGGAGTGTTTTTATGTGTAGAAGTGCATACAAATTACAAATGCATTTAAGTGACATTCGCAATGCAATAAATTGAACATTTTATTG 380 24177176 0.832317126 39 351 3036 0.917410714 1.437750563 0.303571429 0.157894737 0.285714286 380 23 14 411 2R:24177104-24177279 6 Nop60B FBtr0300227|FBtr0300861|FBtr0100213 24177104|24177104|24177104 24186343|24186343|24186343 AGCTGT 6mer3-8 dme-miR-1008-3p 2R + 24177090 24177270 stop_codon Nop60B FlyBase G14369.1 CGAAGCTCAGGAATAGGAATCAGAAGTTTCTATAGGATTAGGTTTTAAAGAGAATTCTACGCTTTTTTGTAGAGGCACCTACCGATTGCTAGCTGTTAGGTTTAAGGAGTGTTTTTATGTGTAGAAGTGCATACAAATTACAAATGCATTTAAGTGACATTCGCAATGCAATAAATTGAAC 207 24177176 0.987847291 32 182 1632 0.898360656 1.358569317 0.275409836 0.347826087 0.557377049 207 20 11 274 2R:24177090-24177270 6 146.5 1585 FBgn0259937 3319.8 215.61 334.3133333 0.044129164 0.679467557 0.438211658 4 4 4 0.1 dme-miR-92b-3p 7mer-A1 TGCAATA 2R 24185495 24185501 + 2R_24185495_24185501_+ 0.554272507 0.708091678 0.631182092 0.108766599 Nop60B FBtr0300861|FBtr0100213|FBtr0300227 24177104|24177104|24177104 24186343|24186343|24186343 2R + 24185494 24185524 5'utr Nop60B FlyBase G18886.1 ATGCAATATATGGACTATAACTTTAATAAAA 42 24185504 0.827926661 2 40 321 0.963636364 1.423245874 0 0.214285714 0.4 42 1 1 53 2R:24185494-24185524 7 Nop60B FBtr0300227|FBtr0300861|FBtr0100213 24177104|24177104|24177104 24186343|24186343|24186343 TGCAATA 7mer-A1 dme-miR-92b-3p 2R + 24185494 24185524 5'utr Nop60B FlyBase G14370.1 ATGCAATATATGGACTATAACTTTAATAAAA 43 24185504 0.79304305 5 42 311 0.984126984 1.792391689 0 0.372093023 0.571428571 43 1 0 62 2R:24185494-24185524 7 41.5 1586 FBgn0259937 3319.8 215.61 334.3133333 0.012500753 0.192477158 0.124135043 -9 -9 -9 0.1 dme-miR-33-5p 8mer-A1 CAATGCAA 2R 24264882 24264889 + 2R_24264882_24264889_+ 0.632900917 0.63318307 0.633041993 0.000199546 CG3376 FBtr0072265 24264348 24265213 2R + 24264853 24265208 3'utr CG3376 FlyBase G18961.4 TGGTCGTTTGAGGTCATCCAACTGCAAGTCAATGCAATCGCAACGAAGGAAAACTCCTACCCCATAAGCTTACTATGTGATAACTAGTGCTTAAAACCATTTCGCTTAGTGTACGTTAACGCAATGATGTCCCAAAACTGCCTGCTTTGAAACCTTACAATCGCCCTTCGGAATCTGAGTCAGTGAAGAATAGTCATTTATCTGTAATCGAGTCGATGCTGTTGCCCACTCCGCAGCATTTGCGGTCGTGGCATGTTGCGCGCTTTTACGCAATGGAAATTGTCGAGCAAATTACCTTCTAAGACACCTAATTGTAAAGCTAACCTAGGTCTTAACTTAAATAAAGTGCAATTATT 255 24264881 0.974749414 47 237 1375 0.920127796 1.857332496 0.309904153 0.192156863 0.341853035 255 22 3 288 2R:24264853-24265208 8 CG3376 FBtr0072265|FBtr0343442 24264348|24264838 24265213|24265213 CAATGCAA 8mer-A1 dme-miR-33-5p 2R + 24264851 24264963 3'utr CG3376 FlyBase G14427.2 GATGGTCGTTTGAGGTCATCCAACTGCAAGTCAATGCAATCGCAACGAAGGAAAACTCCTACCCCATAAGCTTACTATGTGATAACTAGTGCTTAAAACCATTTCGCTTAGTG 93 24264881 0.923431083 14 79 385 0.869565217 1.037788561 0.326086957 0.344086022 0.557971014 93 8 10 120 2R:24264851-24264963 8 70.5 1587 FBgn0034997 1791.34 62.30666667 94.61 0.039356013 1.131500107 0.745164359 1 1 1 0.1 dme-miR-1006-3p 8mer-A1 CGAATTTA 2R 24312766 24312773 + 2R_24312766_24312773_+ 0.671695388 0.61660288 0.644149134 0.03895628 betaTub60D FBtr0072270|FBtr0343443 24312146|24312146 24313099|24313099 2R + 24312675 24312853 3'utr betaTub60D FlyBase G18982.1 AACCCCAAGTTATCCCACGTCATTCTTATACTACTATTTATATCGCAACGTCAGCAGAAGGACCACAAGTATCTAGTATTGCAAAGGATATCGAATTTATGCAGAAATCTCAAAACGAGAATGTCCAGCGTCTAGGAAGTCGGCACTCAAGACTTGGCGGCACTTACGTTTAGGGCTAT 110 24312765 0.968301615 22 105 645 0.94488189 2.079181246 0.212598425 0.145454545 0.25984252 110 7 0 120 2R:24312675-24312853 8 betaTub60D FBtr0343443|FBtr0072270 24312146|24312146 24313099|24313099 CGAATTTA 8mer-A1 dme-miR-1006-3p 2R + 24312670 24312786 3'utr betaTub60D FlyBase G14446.1 TTCATAACCCCAAGTTATCCCACGTCATTCTTATACTACTATTTATATCGCAACGTCAGCAGAAGGACCACAAGTATCTAGTATTGCAAAGGATATCGAATTTATGCAGAAATCTCA 54 24312748 0.965927473 16 50 287 0.934065934 1.452297671 0.131868132 0.518518519 0.714285714 54 4 2 85 2R:24312670-24312786 8 27 1588 FBgn0003888 691.4333333 33.13333333 50.45333333 0.039049318 0.814889336 0.535147992 1 18 9.5 0.1 dme-miR-92b-3p 7mer-m1 TGCAATT 2R 24312935 24312941 + 2R_24312935_24312941_+ 0.765138994 0.765568942 0.765353968 0.000303985 betaTub60D FBtr0072270|FBtr0343443 24312146|24312146 24313099|24313099 2R + 24312926 24313070 3'utr betaTub60D FlyBase G18984.1 AAAAGCATCTGCAATTGTATTTACATAATCTTAGGGCACAATCTATTCACTTTGTATTCGTGTGCAGTACTTCTCTTGTAGTTTTATATGGATAAAAACATTTGTACCCAATAAATAACTAATAATAATGGCAAACATTTTTGAC 61 24312940 0.890466309 18 55 552 0.917808219 1.525044807 0.164383562 0.131147541 0.273972603 61 5 1 67 2R:24312926-24313070 7 betaTub60D FBtr0343443|FBtr0072270 24312146|24312146 24313099|24313099 TGCAATT 7mer-m1 dme-miR-92b-3p 2R + 24312927 24313059 3'utr betaTub60D FlyBase G14448.1 AAAGCATCTGCAATTGTATTTACATAATCTTAGGGCACAATCTATTCACTTTGTATTCGTGTGCAGTACTTCTCTTGTAGTTTTATATGGATAAAAACATTTGTACCCAATAAATAACTAATAATAATGGCAA 43 24312941 0.870051223 16 36 364 0.825396825 1.414973348 0.047619048 0.348837209 0.555555556 43 10 1 52 2R:24312927-24313059 7 19 1589 FBgn0003888 691.4333333 33.13333333 50.45333333 0.02747915 0.573440644 0.376585624 -5 -6 -5.5 0.1 dme-miR-1003-3p 6mer2-7 TGTGAG 2R 24392317 24392322 - 2R_24392317_24392322_- 0.981527584 0.926677953 0.954102768 0.038784524 slik FBtr0072366|FBtr0332925|FBtr0072364 24392127|24392127|24392127 24393053|24393053|24393053 2R - 24392173 24392367 3'utr slik FlyBase G26328.1 AACAGAAGAAATATGTGAGATGTTGGGATTCCATGAAACAAATTGTGTGAGCGCTCGAGTTTTGAGCTGCAGACGGACGTAGATATGCAGATCGATAATGAGGGGCCGTCGGGTAACAGTAAACGATATTTATATTTGTACAAGTTTATGCTTATATATTTTATATAAATATATATATATATATTTAAAATAAAC 45 24392325 0.983309584 18 44 281 0.981818182 1.73239376 0.381818182 0.2 0.345454545 45 1 0 54 2R:24392173-24392367 6 slik FBtr0332925|FBtr0072364|FBtr0072366 24392127|24392127|24392127 24393053|24393053|24393053 TGTGAG 6mer2-7 dme-miR-1003-3p 2R - 24392210 24392416 3'utr slik FlyBase G19913.1 AGAGACAGAGACACATCCACGGAAAGTTTAGCAAAAGTTAATGTGTAGCAACAGAAGAAATATGTGAGATGTTGGGATTCCATGAAACAAATTGTGTGAGCGCTCGAGTTTTGAGCTGCAGACGGACGTAGATATGCAGATCGATAATGAGGGGCCGTCGGGTAACAGTAAACGATATTTATATTTGTACAAGTTTATGCTTATATA 33 24392325 0.973928813 16 32 196 0.962264151 1.707570176 0.377358491 0.393939394 0.622641509 33 2 0 51 2R:24392210-24392416 6 13 1590 FBgn0035001 5352.49 110.13 168.49 0.002428776 0.118042314 0.077155914 3 3 3 0.1 dme-miR-980-3p 7mer-A1 GCAGCTA 2R 24392975 24392981 - 2R_24392975_24392981_- 0.702109076 0.795063615 0.748586345 0.065728757 slik FBtr0072366|FBtr0332925|FBtr0072364|FBtr0100470 24392127|24392127|24392127|24392821 24393053|24393053|24393053|24393053 2R - 24392891 24392999 3'utr slik FlyBase G26332.1 AAAGGAACTGCAGCGGCAGCAGCTATGACAGCTATGCAGAACGTAACAAAACAATTGTCAGCCATCCATTAAGGCTTCCGCCAGAGATTGAGCGCCTCTGCTTTGCTTA 52 24392974 0.866627364 11 51 214 0.964912281 1.740362689 0.210526316 0.076923077 0.157894737 52 2 0 55 2R:24392891-24392999 7 slik FBtr0332925|FBtr0072364|FBtr0100470|FBtr0072366 24392127|24392127|24392821|24392127 24393053|24393053|24393053|24393053 GCAGCTA 7mer-A1 dme-miR-980-3p 2R - 24392955 24392999 3'utr slik FlyBase G19917.1 AAAGGAACTGCAGCGGCAGCAGCTATGACAGCTATGCAGAACGTA 19 24392975 0.755108189 4 18 64 1 1.531478917 0.323529412 0.421052632 0.676470588 19 0 0 34 2R:24392955-24392999 7 28.5 1591 FBgn0035001 5352.49 110.13 168.49 0.005324625 0.258785072 0.169149504 -7 -6 -6.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2R 24394005 24394010 - 2R_24394005_24394010_- 0.999914352 0.999727913 0.999821132 0.000131875 slik FBtr0290019 24393676 24394246 2R - 24393988 24394036 3'utr slik FlyBase G26335.1 AATTTGTAAAGCTTTTCTCACCTAATTACCTGCAACGGAAAATGCCATA 15 24394011 0.978960368 2 13 92 0.941176471 0.903089987 0.117647059 0.133333333 0.235294118 15 0 1 16 2R:24393988-24394036 6 slik FBtr0290019 24393676 24394246 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2R - 24393900 24394038 3'utr slik FlyBase G19920.1 CGAATTTGTAAAGCTTTTCTCACCTAATTACCTGCAACGGAAAATGCCATACATTCTGTCTTGCCAAAAGTTGATTGTTTGTTGGAAATGCTATTTTAATGAACGAAAGTGGATTACTTGTTTGCCTATTTTTAATGTT 17 24394011 0.984509555 9 17 141 1 1.397940009 0.12 0.470588235 0.64 17 0 0 25 2R:24393900-24394038 6 11 1592 FBgn0035001 5352.49 110.13 168.49 0.002055118 0.099881958 0.065285774 1 1 1 0.1 dme-miR-33-5p 7mer-m8 CAATGCA 2R 24404714 24404720 - 2R_24404714_24404720_- 0.544556442 0.602894689 0.573725566 0.041251408 SerT FBtr0072362|FBtr0343316 24404593|24404593 24405451|24405451 2R - 24404700 24404736 3'utr SerT FlyBase G26370.1 TAGAGAACGCCCTGTACAATGCATTACTCAACCGTTT 26 24404713 0.720391733 5 26 126 1 1.531478917 0.176470588 0.192307692 0.382352941 26 0 0 34 2R:24404700-24404736 7 SerT FBtr0072362|FBtr0343316 24404593|24404593 24405451|24405451 CAATGCA 7mer-m8 dme-miR-33-5p 2R - 24404702 24404739 3'utr SerT FlyBase G19950.1 AGATAGAGAACGCCCTGTACAATGCATTACTCAACCGT 14 24404713 0.702134529 5 14 63 1 1.414973348 0.230769231 0.571428571 0.769230769 14 0 0 26 2R:24404702-24404739 7 19.5 1593 FBgn0010414 3 0.116666667 0.176666667 6.5 167.1428571 110.3773585 -7 -7 -7 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 24405175 24405181 - 2R_24405175_24405181_- 0.660229748 0.661610026 0.660919887 0.000976019 SerT FBtr0072362|FBtr0343316 24404593|24404593 24405451|24405451 2R - 24405132 24405228 3'utr SerT FlyBase G26374.1 ATCATCACCATCAGCATCAGCATCGGATCAGCAGCGATATCATTAGCTCTAGTCTTAGGCAGTCGCACAGCCATAGTTTAAGCCTCTGCTCGGTGCA 76 24405174 0.982051349 10 72 536 0.957894737 1.959041392 0.031578947 0.236842105 0.389473684 76 4 0 91 2R:24405132-24405228 7 SerT FBtr0072362|FBtr0343316 24404593|24404593 24405451|24405451 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R - 24405155 24405228 3'utr SerT FlyBase G19953.1 ATCATCACCATCAGCATCAGCATCGGATCAGCAGCGATATCATTAGCTCTAGTCTTAGGCAGTCGCACAGCCAT 46 24405174 0.980204359 10 46 319 1 1.886490725 0.090909091 0.434782609 0.662337662 46 0 0 77 2R:24405155-24405228 7 55.5 1594 FBgn0010414 3 0.116666667 0.176666667 18.5 475.7142857 314.1509434 -7 -7 -7 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2R 24414144 24414150 + 2R_24414144_24414150_+ 0.671795151 0.671793028 0.67179409 1.56E-06 CG45068 FBtr0344430 24414110 24415295 2R + 24414096 24414169 stop_codon CG45068 FlyBase G19003.1 GGAAACCGCGGCGTAGTCTTCACTTCTTGGCCAGTCCAAGTGCCTTATACCAAAGTTCTAGGTTAAGATTAACT 42 24414143 0.988669692 7 41 378 0.976744186 1.62324929 0.023255814 0.023809524 0.046511628 42 1 0 42 2R:24414096-24414169 7 CG45068 FBtr0344430 24414110 24415295 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 24414093 24414165 stop_codon CG45068 FlyBase G14462.1 GACGGAAACCGCGGCGTAGTCTTCACTTCTTGGCCAGTCCAAGTGCCTTATACCAAAGTTCTAGGTTAAGATT 23 24414143 0.985142535 6 23 188 1 1.556302501 0.138888889 0.347826087 0.583333333 23 0 0 36 2R:24414093-24414165 7 30 1595 FBgn0266438 77.02666667 2.906666667 4.47 0.389475506 10.32110092 6.711409396 1 1 1 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2R 24414289 24414295 + 2R_24414289_24414295_+ 0.81527953 0.728191323 0.771735427 0.061580657 CG45068 FBtr0344430 24414110 24415295 2R + 24414258 24414325 3'utr CG45068 FlyBase G19004.1 GTGCACAGCAAACTTGAAATTTTGAATATGGCTAGTCATTACCAAATATTCCCTTGATCTTAAGATTC 42 24414296 0.973008794 9 36 333 0.905660377 1.204119983 0.018867925 0.142857143 0.320754717 42 3 2 48 2R:24414258-24414325 7 CG45068 FBtr0344430 24414110 24415295 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R + 24414223 24414318 3'utr CG45068 FlyBase G14463.1 TTGTTAAGCTTGACTTCTGTAAACATTCCCAATATGTGCACAGCAAACTTGAAATTTTGAATATGGCTAGTCATTACCAAATATTCCCTTGATCTT 34 24414296 0.984861332 13 30 262 0.879310345 1.707570176 0.051724138 0.5 0.706896552 34 7 0 51 2R:24414223-24414318 7 30.5 1596 FBgn0266438 77.02666667 2.906666667 4.47 0.395966765 10.49311927 6.823266219 -7 -7 -7 0.1 dme-miR-8-3p 7mer-A1 AGTATTA 2R 24523359 24523365 - 2R_24523359_24523365_- 0.823084556 0.822993306 0.823038931 6.46E-05 CG4612 FBtr0306137 24521872 24524317 2R - 24523341 24523382 3'utr CG4612 FlyBase G26393.1 CCTGCGGACAGTACATGAGTATTAAAATTTTAGCGATTACAA 12 24523367 0.876618982 2 10 76 0.833333333 1 0.25 0 0 12 2 0 10 2R:24523341-24523382 7 CG4612 FBtr0306137 24521872 24524317 AGTATTA 7mer-A1 dme-miR-8-3p 2R - 24523340 24523385 3'utr CG4612 FlyBase G19968.1 TATCCTGCGGACAGTACATGAGTATTAAAATTTTAGCGATTACAAG 7 24523367 0.967021972 3 7 44 1 1 0.3 0.428571429 0.6 7 0 0 10 2R:24523340-24523385 7 9.5 1597 FBgn0035016 1738.693333 59.93333333 91.91666667 0.005463873 0.158509455 0.103354488 2 2 2 0.1 dme-miR-980-3p 7mer-A1 GCAGCTA 2R 24524194 24524200 - 2R_24524194_24524200_- 0.813812465 0.814709588 0.814261026 0.000634345 CG4612 FBtr0306137|FBtr0072346 24521872|24523703 24524317|24524317 2R - 24524092 24524239 3'utr CG4612 FlyBase G26396.1 ATATAAACCTATATAGATATTTACGAGAAATTGTATCGAGCAGCTAGGCGGACATTCAGGCAGCAGACGGACGGGAGGCAGCTCCTTCGCATATACACTTAGATGTAGGCAAAAGTCTTGCAACACAGTTGAAATTTATAGAAAGAAC 37 24524208 0.96359276 16 33 172 0.840909091 1.267171728 0.363636364 0.135135135 0.272727273 37 6 1 37 2R:24524092-24524239 7 CG4612 FBtr0306137|FBtr0072346 24521872|24523703 24524317|24524317 GCAGCTA 7mer-A1 dme-miR-980-3p 2R - 24524152 24524221 3'utr CG4612 FlyBase G19970.1 ATTTACGAGAAATTGTATCGAGCAGCTAGGCGGACATTCAGGCAGCAGACGGACGGGAGGCAGCTCCTTC 29 24524208 0.92062927 9 24 97 0.808510638 1.579783597 0.255319149 0.344827586 0.595744681 29 9 0 38 2R:24524152-24524221 7 19.5 1598 FBgn0035016 1738.693333 59.93333333 91.91666667 0.011215319 0.325361513 0.212148685 8 8 8 0.1 dme-miR-278-3p 6mer3-8 CCCACC 2R 24533454 24533459 - 2R_24533454_24533459_- 0.822479252 0.752638355 0.787558804 0.049384974 CG4622 FBtr0300490|FBtr0072344 24533372|24533372 24533500|24533500 2R - 24533449 24533482 3'utr CG4622 FlyBase G26402.1 AATACAAACCACATCAATTCCCGCCCACCATATG 26 24533465 0.685718313 2 26 71 1 1.51851394 0 0.230769231 0.393939394 26 0 0 33 2R:24533449-24533482 6 CG4622 FBtr0300490|FBtr0072344 24533372|24533372 24533500|24533500 CCCACC 6mer3-8 dme-miR-278-3p 2R - 24533449 24533482 3'utr CG4622 FlyBase G19973.1 AATACAAACCACATCAATTCCCGCCCACCATATG 9 24533465 0.669045635 2 9 25 1 1.113943352 0 0.444444444 0.615384615 9 0 0 13 2R:24533449-24533482 6 17.5 1599 FBgn0035021 190.4166667 12.30333333 18.86 0.09190372 1.422378759 0.927889714 6 6 6 0.1 dme-miR-8-3p 6mer2-7 AGTATT 2R 24557174 24557179 + 2R_24557174_24557179_+ 1 0.995211326 0.997605663 0.003386122 ITP FBtr0290219 24556424 24558961 2R + 24557142 24557206 3'utr ITP FlyBase G19026.1 ACACACATATATACACCGCAATCGAGACCGAAAGTATTTTGCAAATGTATTACACTTACAATTTT 16 24557181 0.978272963 5 16 109 1 1.278753601 0 0.1875 0.315789474 16 0 0 19 2R:24557142-24557206 6 ITP FBtr0290219 24556424 24558961 AGTATT 6mer2-7 dme-miR-8-3p 2R + 24557163 24557243 3'utr ITP FlyBase G14477.1 TCGAGACCGAAAGTATTTTGCAAATGTATTACACTTACAATTTTGTGCTATTTTGTAAAGATGAAACCCTGAATTAGTGTA 14 24557180 0.980865037 7 14 97 1 1.397940009 0 0.642857143 0.8 14 0 0 25 2R:24557163-24557243 6 9.5 1600 FBgn0035023 1304.81 56.75666667 87.48 0.007280754 0.167381218 0.108596251 -7 -6 -6.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 24557543 24557549 + 2R_24557543_24557549_+ 0.762341255 0.757036833 0.759689044 0.003750848 ITP FBtr0290219|FBtr0290219|FBtr0290219 24556424|24556424|24556424 24558961|24558961|24558961 2R + 24557499 24557593 3'utr ITP FlyBase G19028.1 AAAGGATAATCAATCATTCGCTGGCTATTTGAGAGCATCAAAATTGTGATAAATGAGAATTAGAATGCGAATGCGCGACGCAGGACACCGCCAGA 236 24557542 0.970189644 11 222 1268 0.939285714 1.419955748 0.189285714 0.156779661 0.289285714 236 8 9 263 2R:24557499-24557593 7 ITP FBtr0290219|FBtr0290219|FBtr0290219 24556424|24556424|24556424 24558961|24558961|24558961 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 24557491 24557583 3'utr ITP FlyBase G14478.1 AAATTAATAAAGGATAATCAATCATTCGCTGGCTATTTGAGAGCATCAAAATTGTGATAAATGAGAATTAGAATGCGAATGCGCGACGCAGGA 156 24557542 0.969239642 10 148 831 0.946188341 1.421192468 0.174887892 0.314102564 0.520179372 156 5 7 211 2R:24557491-24557583 7 182 1601 FBgn0035023 1304.81 56.75666667 87.48 0.13948391 3.206671757 2.080475537 1 1 1 0.1 dme-miR-980-3p 6mer2-7 GCAGCT 2R 24557636 24557641 + 2R_24557636_24557641_+ 0.999891865 0.999857316 0.99987459 2.45E-05 ITP FBtr0290219 24556424 24558961 2R + 24557597 24557656 3'utr ITP FlyBase G19029.1 AGAGACCGCCATACAGAAGGCGACAGAGACAGACAGACTGCAGCTGGCGATTTGCGCGCG 8 24557647 0.875103766 5 8 19 1 0.954242509 0.333333333 0.125 0.222222222 8 0 0 9 2R:24557597-24557656 6 ITP FBtr0290219 24556424 24558961 GCAGCT 6mer2-7 dme-miR-980-3p 2R + 24557614 24557656 3'utr ITP FlyBase G14479.1 AGGCGACAGAGACAGACAGACTGCAGCTGGCGATTTGCGCGCG 6 24557647 0.918304157 3 5 17 0.9 0.954242509 0.7 0.666666667 0.8 6 1 0 9 2R:24557614-24557656 6 6.5 1602 FBgn0035023 1304.81 56.75666667 87.48 0.004981568 0.114523991 0.074302698 -11 -11 -11 0.1 dme-miR-282-5p 7mer-m8 AGAGGCT 2R 24558069 24558075 + 2R_24558069_24558075_+ 0.631513847 0.631524472 0.63151916 7.57E-06 ITP FBtr0290219 24556424 24558961 2R + 24558035 24558100 3'utr ITP FlyBase G19030.1 AATGCTTCGGATCGCCCTTCTTCAACGCCTGCATAGAGGCTCTTCAGCTGCACGAGGAGATGGACA 65 24558068 0.913785312 6 62 363 0.948717949 1.86923172 0.397435897 0.184615385 0.320512821 65 4 0 74 2R:24558035-24558100 7 ITP FBtr0290219 24556424 24558961 AGAGGCT 7mer-m8 dme-miR-282-5p 2R + 24558047 24558091 3'utr ITP FlyBase G14480.1 CGCCCTTCTTCAACGCCTGCATAGAGGCTCTTCAGCTGCACGAGG 25 24558068 0.874456466 3 20 129 0.815789474 1.491361694 0.552631579 0.32 0.552631579 25 7 0 31 2R:24558047-24558091 7 41 1603 FBgn0035023 1304.81 56.75666667 87.48 0.031422199 0.722382099 0.468678555 1 1 1 0.1 dme-miR-79-3p 6mer2-7 AGCTTT 2R 24558473 24558478 + 2R_24558473_24558478_+ 0.932492231 0.967399919 0.949946075 0.024683471 ITP FBtr0300186|FBtr0290219 24558137|24556424 24558961|24558961 2R + 24558448 24558492 3'utr ITP FlyBase G19032.1 CATCTGTCATGAAACAGTCTCGTGGAGCTTTTAGTTGTAGTGAAT 12 24558478 0.988365208 8 12 114 1 1.113943352 0.153846154 0.083333333 0.153846154 12 0 0 13 2R:24558448-24558492 6 ITP FBtr0290219|FBtr0300186 24556424|24558137 24558961|24558961 AGCTTT 6mer2-7 dme-miR-79-3p 2R + 24558458 24558492 3'utr ITP FlyBase G14481.1 GAAACAGTCTCGTGGAGCTTTTAGTTGTAGTGAAT 10 24558479 0.610112055 7 9 95 0.933333333 1.146128036 0.4 0.5 0.666666667 10 1 0 14 2R:24558458-24558492 6 11 1604 FBgn0035023 1304.81 56.75666667 87.48 0.008430346 0.193809831 0.125743027 -5 -6 -5.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 24558909 24558915 + 2R_24558909_24558915_+ 0.661615511 0.661615511 0.661615511 0 ITP FBtr0300186|FBtr0290219 24558137|24556424 24558961|24558961 2R + 24558890 24558934 3'utr ITP FlyBase G19035.1 TAATTTAAACTTGTTTGGATCTAGTCGTAAAATATAAATAAAGAT 51 24558907 0.626572594 12 43 451 0.877192982 1.096910013 0.01754386 0.098039216 0.192982456 51 4 3 50 2R:24558890-24558934 7 ITP FBtr0290219|FBtr0300186 24556424|24558137 24558961|24558961 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 24558886 24558938 3'utr ITP FlyBase G14485.1 TAATTAATTTAAACTTGTTTGGATCTAGTCGTAAAATATAAATAAAGATTGTA 31 24558904 0.644614109 12 25 267 0.840909091 1.267171728 0.113636364 0.35483871 0.545454545 31 6 1 37 2R:24558886-24558938 7 39.5 1605 FBgn0035023 1304.81 56.75666667 87.48 0.030272607 0.695953486 0.451531779 2 5 3.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 2R 24568160 24568165 - 2R_24568160_24568165_- 0.999997999 0.999999985 0.999998992 1.41E-06 Fcp1 FBtr0343489|FBtr0072342 24567985|24567985 24568459|24568459 2R - 24568154 24568185 3'utr Fcp1 FlyBase G26412.1 TGAATCAAAAACTCTCATTCTGATCTAATGTA 9 24568166 0.684736527 4 8 63 0.846153846 1.041392685 0 0.222222222 0.461538462 9 2 0 11 2R:24568154-24568185 6 Fcp1 FBtr0343489|FBtr0072342 24567985|24567985 24568459|24568459 TGATCT 6mer3-8 dme-bantam-3p 2R - 24568128 24568177 3'utr Fcp1 FlyBase G19979.1 AAACTCTCATTCTGATCTAATGTAAATTGAAGCCTACTGTAAATGTAAAT 6 24568165 0.990418314 4 5 46 0.8 0.903089987 0 0.333333333 0.6 6 2 0 8 2R:24568128-24568177 6 6.5 1606 FBgn0035026 362.9966667 13.60666667 20.97333333 0.017906501 0.477707006 0.309917355 1 0 0.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2R 24577629 24577634 + 2R_24577629_24577634_+ 0.999999976 0.999999848 0.999999912 1.41E-07 Start1 FBtr0089868|FBtr0305054|FBtr0089867|FBtr0343485 24577463|24577463|24577260|24577463 24577676|24577676|24577676|24577676 2R + 24577553 24577648 3'utr Start1 FlyBase G19067.1 AATTTGAAGCAGGAGAGCGAGTTCAGTGCTGTAAGTTTATTGAGTATTTTATGTATATGTATGGCATAAGTTCTATGTACCTATATGCACGGCTTA 18 24577628 0.987528605 11 18 158 1 1.342422681 0.227272727 0.166666667 0.318181818 18 0 0 22 2R:24577553-24577648 6 Start1 FBtr0089867|FBtr0343485|FBtr0089868|FBtr0305054 24577260|24577463|24577463|24577463 24577676|24577676|24577676|24577676 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2R + 24577613 24577640 3'utr Start1 FlyBase G14505.1 ATGGCATAAGTTCTATGTACCTATATGC 5 24577628 0.873907199 2 5 36 1 0.77815125 0.5 0.2 0.333333333 5 0 0 6 2R:24577613-24577640 6 7 1607 FBgn0035028 314 17.47 26.84 0.022292994 0.400686892 0.260804769 1 1 1 0.1 dme-miR-8-3p 7mer-m8 CAGTATT 2R 24602054 24602060 + 2R_24602054_24602060_+ 0.661615243 0.655925425 0.658770334 0.004023296 CG3548 FBtr0072315 24601611 24602367 2R + 24602036 24602080 3'utr CG3548 FlyBase G19073.1 CGCAATTTACTCATCAGTCAGTATTCTCTATGGCCACTGTATTAT 39 24602066 0.798322698 6 38 313 1 1.653212514 0.022222222 0.102564103 0.222222222 39 0 0 45 2R:24602036-24602080 7 CG3548 FBtr0072315 24601611 24602367 CAGTATT 7mer-m8 dme-miR-8-3p 2R + 24601983 24602092 3'utr CG3548 FlyBase G14509.1 ACAAACTCGAAAATACTCATGCACAGACTCTGAATAAGTTCCCCTTTGCAGAACGCAATTTACTCATCAGTCAGTATTCTCTATGGCCACTGTATTATTTTTATACCTTC 37 24602066 0.975211145 8 34 276 0.929824561 1.72427587 0.105263158 0.405405405 0.614035088 37 4 0 53 2R:24601983-24602092 7 31.5 1608 FBgn0035033 297.01 16.31333333 24.96666667 0.106057035 1.93093584 1.261682243 -12 -12 -12 0.1 dme-miR-932-5p 7mer-m8 GGAATTG 2R 24671705 24671711 - 2R_24671705_24671711_- 0.702093729 0.70173649 0.701915109 0.000252579 Mmp1 FBtr0304005|FBtr0304008|FBtr0273263|FBtr0304009|FBtr0304011|FBtr0304010|FBtr0306656 24671292|24671292|24671292|24671292|24671292|24671292|24671292 24673278|24672142|24672142|24672765|24672765|24673278|24673278 2R - 24671686 24671763 3'utr Mmp1 FlyBase G26433.1 GCTGTTTTGGTAATGACAAATTGCGATATTAAATTTAACGAGCCATATGCAAGGAATTGGAGAGAACCAAACAAAAAT 51 24671716 0.865118391 8 43 256 0.836065574 1.008600172 0.229508197 0.176470588 0.31147541 51 6 4 51 2R:24671686-24671763 7 Mmp1 FBtr0304011|FBtr0306656|FBtr0304009|FBtr0304010|FBtr0273263|FBtr0304005|FBtr0304008 24671292|24671292|24671292|24671292|24671292|24671292|24671292 24672765|24673278|24672765|24673278|24672142|24673278|24672142 GGAATTG 7mer-m8 dme-miR-932-5p 2R - 24671689 24671762 3'utr Mmp1 FlyBase G19998.1 CTGTTTTGGTAATGACAAATTGCGATATTAAATTTAACGAGCCATATGCAAGGAATTGGAGAGAACCAAACAAA 23 24671716 0.975477956 4 20 124 0.868421053 1.51851394 0.184210526 0.47826087 0.684210526 23 5 0 33 2R:24671689-24671762 7 23 1609 FBgn0035049 2672.446667 111.6666667 172.33 0.008606346 0.205970149 0.133464864 5 5 5 0.1 dme-miR-1007-3p 7mer-m8 TGAGCTT 2R 24766341 24766347 + 2R_24766341_24766347_+ 0.620203442 0.620203442 0.620203442 0 CG3894 FBtr0300130 24766264 24766750 2R + 24766331 24766412 3'utr CG3894 FlyBase G19117.1 GAAGTGTGCATGAGCTTGGGTCGTGATAGTCTGTTTACCCATATATATATTGTATACGCCTGCAGCGCTAGTGAAGGGCCCT 24 24766363 0.953718487 13 23 171 0.931034483 1.431363764 0.24137931 0.208333333 0.344827586 24 2 0 27 2R:24766331-24766412 7 CG3894 FBtr0300130 24766264 24766750 TGAGCTT 7mer-m8 dme-miR-1007-3p 2R + 24766317 24766373 3'utr CG3894 FlyBase G14538.1 AATGCGTGTTTGGGGAAGTGTGCATGAGCTTGGGTCGTGATAGTCTGTTTACCCATA 17 24766362 0.771413649 9 16 135 0.965517241 1.146128036 0.034482759 0.529411765 0.724137931 17 0 1 28 2R:24766317-24766373 7 15.5 1610 FBgn0035059 104 8.213333333 12.5 0.149038462 1.887175325 1.24 -22 -21 -21.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2R 24766540 24766545 + 2R_24766540_24766545_+ 0.999962082 0.999964831 0.999963456 1.91E-06 CG3894 FBtr0300130 24766264 24766750 2R + 24766485 24766599 3'utr CG3894 FlyBase G19119.1 TTGTAATTTCTGTAGATATATTTTATACTTTGGTTCTAGTTACCAATACACTCTTTACCTGGACGACCTATGTTGTAGATCATAATCCTCGCCATCGTTTGTGTATGTGTGGATC 217 24766539 0.805256069 16 209 1532 0.967479675 1.677606953 0.227642276 0.124423963 0.227642276 217 4 4 238 2R:24766485-24766599 6 CG3894 FBtr0300130 24766264 24766750 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2R + 24766513 24766642 3'utr CG3894 FlyBase G14540.2 TTTGGTTCTAGTTACCAATACACTCTTTACCTGGACGACCTATGTTGTAGATCATAATCCTCGCCATCGTTTGTGTATGTGTGGATCACCAACACCAGCGGAGGTCTCCTGGGCGCCCCGACTTTTAGCG 146 24766539 0.803524858 15 141 962 0.969026549 1.641474111 0.230088496 0.431506849 0.632743363 146 3 4 219 2R:24766513-24766642 6 148 1611 FBgn0035059 104 8.213333333 12.5 1.423076923 18.01948052 11.84 1 1 1 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 2R 24768647 24768653 - 2R_24768647_24768653_- 0.425400031 0.348382467 0.386891249 0.054459597 Eps-15 FBtr0072433|FBtr0072435|FBtr0072434 24768312|24768312|24768312 24768680|24768680|24768680 2R - 24768631 24768675 3'utr Eps-15 FlyBase G26447.1 ATGAAAACCTTGGTGGGTTGGATGTGATTGACCCATGAGAAGTTG 17 24768647 0.859046333 4 16 131 1 1.322219295 0.238095238 0.235294118 0.380952381 17 0 0 21 2R:24768631-24768675 7 Eps-15 FBtr0072434|FBtr0072433|FBtr0072435 24768312|24768312|24768312 24768680|24768680|24768680 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 24768623 24768670 3'utr Eps-15 FlyBase G20011.1 AACCTTGGTGGGTTGGATGTGATTGACCCATGAGAAGTTGCAGTGGCA 15 24768647 0.857747814 2 15 112 1 1.301029996 0.3 0.333333333 0.5 15 0 0 20 2R:24768623-24768670 7 15.5 1612 FBgn0035060 692.06 19.62666667 29.91 0.022396902 0.789741848 0.518221331 -6 -6 -6 0.1 dme-miR-304-5p 6mer2-7 GAGATT 2R 24788051 24788056 - 2R_24788051_24788056_- 0.999638517 0.999998679 0.999818598 0.0002547 Reg-5 FBtr0072427|FBtr0305671 24788006|24788006 24788287|24788287 2R - 24788007 24788096 3'utr Reg-5 FlyBase G26491.1 AATTTTATTTATTCGCGTGCATTAGTCGTAAGATCACATAGAGATTCTTGAGTAATAAACCGCATGATGATTATCATTGTTACGAACGTA 57 24788075 0.874270557 13 56 401 0.970588235 1.819543936 0.235294118 0.175438596 0.308823529 57 2 0 66 2R:24788007-24788096 6 Reg-5 FBtr0305671|FBtr0072427 24788006|24788006 24788287|24788287 GAGATT 6mer2-7 dme-miR-304-5p 2R - 24788011 24788090 3'utr Reg-5 FlyBase G20034.1 ATTTATTCGCGTGCATTAGTCGTAAGATCACATAGAGATTCTTGAGTAATAAACCGCATGATGATTATCATTGTTACGAA 42 24788058 0.873442876 9 41 300 0.984126984 1.792391689 0.111111111 0.30952381 0.53968254 42 1 0 62 2R:24788011-24788090 6 24.5 1613 FBgn0015801 337.6666667 24.48 36.89333333 0.072556762 1.000816993 0.664076617 19 2 10.5 0.1 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 24788132 24788138 - 2R_24788132_24788138_- 0.800705639 0.800719332 0.800712485 9.69E-06 Reg-5 FBtr0072427|FBtr0305671 24788006|24788006 24788287|24788287 2R - 24788111 24788284 3'utr Reg-5 FlyBase G26492.1 CGCGGTCAGAGGATCCGCAGGCCTAGACCTAAGTCCTTGTGTGAATGTGATAGAGCAGATGAGGAGATCCTGCATCATAGAGTGCGAGAGTGAACGTGTGAGTCTTCTAGTTGTAGCCGTTTGAGGAGTTTTCTTGAATGCACTTGAGCTTTAATGGAATTTCGTATCGTATTC 597 24788140 0.82031255 30 572 4538 0.957983193 2.136086097 0.256302521 0.162479062 0.299719888 597 26 4 684 2R:24788111-24788284 7 Reg-5 FBtr0305671|FBtr0072427 24788006|24788006 24788287|24788287 AGCTTTA 7mer-A1 dme-miR-79-3p 2R - 24788113 24788271 3'utr Reg-5 FlyBase G20035.1 TCCGCAGGCCTAGACCTAAGTCCTTGTGTGAATGTGATAGAGCAGATGAGGAGATCCTGCATCATAGAGTGCGAGAGTGAACGTGTGAGTCTTCTAGTTGTAGCCGTTTGAGGAGTTTTCTTGAATGCACTTGAGCTTTAATGGAATTTCGTATCGTAT 366 24788140 0.849085515 30 360 2638 0.983576642 2.731588765 0.28649635 0.366120219 0.576642336 366 9 0 539 2R:24788113-24788271 7 353 1614 FBgn0015801 337.6666667 24.48 36.89333333 1.045409674 14.41993464 9.568124322 2 2 2 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2R 24886342 24886349 + 2R_24886342_24886349_+ 0.637873136 0.637871591 0.637872363 1.06E-06 NKAIN FBtr0301847|FBtr0301847|FBtr0301847|FBtr0305056|FBtr0305056|FBtr0305056|FBtr0301849|FBtr0301849|FBtr0301849|FBtr0301848|FBtr0301848|FBtr0301848 24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969 24886945|24886945|24886945|24888615|24888615|24888615|24886945|24886945|24886945|24886945|24886945|24886945 2R + 24886246 24886382 5'utr NKAIN FlyBase G19151.1 ATTCAGATACGTGCGATCAGTAGAGACTTTCCTCGAATTGTGATAGAAGGCGTGGAAAGTCGTGACAGAATGCAAGCCTAACAATTTTATGTTGATCTGTGATAACTGAAAACAAATATGAACGACAAACGATAATT 474 24886341 0.985875411 25 442 3704 0.93554007 1.729974286 0.418118467 0.175105485 0.318815331 474 28 9 537 2R:24886246-24886382 8 NKAIN FBtr0301848|FBtr0301848|FBtr0301848|FBtr0301849|FBtr0301849|FBtr0301849|FBtr0305056|FBtr0305056|FBtr0305056|FBtr0301847|FBtr0301847|FBtr0301847 24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969 24886945|24886945|24886945|24886945|24886945|24886945|24888615|24888615|24888615|24886945|24886945|24886945 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 24886254 24886407 5'utr NKAIN FlyBase G14567.1 ACGTGCGATCAGTAGAGACTTTCCTCGAATTGTGATAGAAGGCGTGGAAAGTCGTGACAGAATGCAAGCCTAACAATTTTATGTTGATCTGTGATAACTGAAAACAAATATGAACGACAAACGATAATTTGAAAAACGAAAATGTCACAAAATC 317 24886341 0.985235473 28 290 2370 0.910714286 1.569267478 0.390625 0.32278481 0.522321429 316 30 10 408 2R:24886254-24886407 8 277.5 1615 FBgn0085442 1933.686667 63.05666667 96.30333333 0.143508255 4.40080351 2.881520197 1 1 1 0.1 dme-miR-263a-5p 6mer3-8 GTGCCA 2R 24886886 24886891 + 2R_24886886_24886891_+ 0.900959184 0.958033576 0.92949638 0.040357695 NKAIN FBtr0301847|FBtr0305056|FBtr0301849|FBtr0301848 24885969|24885969|24885969|24885969 24886945|24888615|24886945|24886945 2R + 24886857 24886919 5'utr NKAIN FlyBase G19157.1 ATTTAGCCATGCGAATTGTGCGTAGACTGGTGCCAATTCTCGAAGAGATTGAACGCGTTTCCA 111 24886879 0.718578461 11 105 670 0.939849624 1.795880017 0.15037594 0.144144144 0.285714286 111 7 1 125 2R:24886857-24886919 6 NKAIN FBtr0301848|FBtr0301849|FBtr0305056|FBtr0301847 24885969|24885969|24885969|24885969 24886945|24886945|24888615|24886945 GTGCCA 6mer3-8 dme-miR-263a-5p 2R + 24886744 24886912 5'utr NKAIN FlyBase G14570.1 CGTATAGAAATGTTAAGCCTAGTATTAAGCTTGAGGCCACAAAACGCAAGAGCAGAGCAGATCTAAATCCATTTAGCGTAGACACTATTTACTGTTTTAGATAGATCCCTCATATTTAGCCATGCGAATTGTGCGTAGACTGGTGCCAATTCTCGAAGAGATTGAACGC 129 24886880 0.979568581 24 119 828 0.927884615 1.984527313 0.158653846 0.395348837 0.625 129 14 1 193 2R:24886744-24886912 6 100 1616 FBgn0085442 1933.686667 63.05666667 96.30333333 0.051714687 1.585875139 1.038385656 7 6 6.5 0.1 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 2R 24888493 24888499 + 2R_24888493_24888499_+ 0.620189353 0.429217856 0.524703604 0.135037243 NKAIN FBtr0305056|FBtr0301851|FBtr0343497 24885969|24888369|24887234 24888615|24888615|24888615 2R + 24888476 24888571 3'utr NKAIN FlyBase G19160.1 AAGCCAAGGCTACCACTTGGTGCTTTAACCACATGGATAGCATATACTTGATCAGTAAAATAACGATATCTGTAGTGCTTAATTTATACGTAAGTT 20 24888492 0.830209509 8 20 162 1 1.342422681 0.181818182 0.1 0.181818182 20 0 0 22 2R:24888476-24888571 7 NKAIN FBtr0343497|FBtr0301851|FBtr0305056 24887234|24888369|24885969 24888615|24888615|24888615 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 2R + 24888458 24888560 3'utr NKAIN FlyBase G14572.1 TATTATATCTTGTGCAACAAGCCAAGGCTACCACTTGGTGCTTTAACCACATGGATAGCATATACTTGATCAGTAAAATAACGATATCTGTAGTGCTTAATTT 13 24888492 0.984153153 7 12 95 0.961538462 1.397940009 0.038461538 0.615384615 0.807692308 13 1 0 25 2R:24888458-24888560 7 5 1617 FBgn0085442 1933.686667 63.05666667 96.30333333 0.002585734 0.079293757 0.051919283 1 1 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2R 24888583 24888589 + 2R_24888583_24888589_+ 0.671794245 0.671796077 0.671795161 1.34E-06 NKAIN FBtr0305056|FBtr0301851|FBtr0343497 24885969|24888369|24887234 24888615|24888615|24888615 2R + 24888573 24888610 3'utr NKAIN FlyBase G19161.1 CTGTCGTTTTACCAAAGTGCCTTTGTAAATAAATACTT 9 24888595 0.652906795 5 8 65 0.916666667 0.740362689 0.083333333 0.333333333 0.5 9 0 1 11 2R:24888573-24888610 7 NKAIN FBtr0343497|FBtr0301851|FBtr0305056 24887234|24888369|24885969 24888615|24888615|24888615 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 24888565 24888599 3'utr NKAIN FlyBase G14573.1 GTAAGTTTCTGTCGTTTTACCAAAGTGCCTTTGTA 21 24888594 0.744534432 7 20 176 0.9375 1.477121255 0.15625 0.476190476 0.65625 21 2 0 30 2R:24888565-24888599 7 15 1618 FBgn0085442 1933.686667 63.05666667 96.30333333 0.007757203 0.237881271 0.155757848 -12 -11 -11.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-m8 CTGTGAT 2R 24909999 24910005 + 2R_24909999_24910005_+ 0.66161477 0.661615694 0.661615232 6.36E-07 NaCP60E FBtr0333816|FBtr0333816|FBtr0333816|FBtr0333815|FBtr0333815|FBtr0333815 24905200|24905200|24905200|24907305|24907305|24907305 24920265|24920265|24920265|24920265|24920265|24920265 2R + 24909971 24910022 3'utr NaCP60E FlyBase G19162.1 TTAGCATCTCAAATGAGATACGCAAAATCTGTGATCAAATCCACGCCCCCTT 12 24909998 0.977141563 3 9 65 0.769230769 0.698970004 0 0.083333333 0.153846154 12 2 1 10 2R:24909971-24910022 7 NaCP60E FBtr0333816|FBtr0333816|FBtr0333816|FBtr0333815|FBtr0333815|FBtr0333815 24905200|24905200|24905200|24907305|24907305|24907305 24920265|24920265|24920265|24920265|24920265|24920265 CTGTGAT 7mer-m8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 24909984 24910012 3'utr NaCP60E FlyBase G14574.1 TGAGATACGCAAAATCTGTGATCAAATCC 6 24909998 0.954754139 2 5 23 0.833333333 0.698970004 0.166666667 0 0 6 1 0 5 2R:24909984-24910012 7 8.5 1619 FBgn0085434 365.8266667 3.443333333 5.213333333 0.023235048 2.468538238 1.630434783 1 1 1 0.1 dme-miR-283-5p 6mer3-8 TGATAT 2R 2494782 2494787 - 2R_2494782_2494787_- 0.999154466 0.881668866 0.940411666 0.083074864 MFS17 FBtr0301780|FBtr0301779|FBtr0301781|FBtr0334936|FBtr0334935 2494740|2494740|2494740|2494740|2494740 2521422|2494825|2494825|2515854|2494965 2R - 2494753 2494807 3'utr MFS17 FlyBase G19280.1 TAAAACTGTTATACCAAATTTGATATATGTTATATGTTCGCTGTTATGATAATAA 18 2494788 0.711138201 7 17 147 0.964285714 1.130333768 0.178571429 0.388888889 0.607142857 18 0 1 27 2R:2494753-2494807 6 MFS17 FBtr0334935|FBtr0334936|FBtr0301781|FBtr0301779|FBtr0301780 2494740|2494740|2494740|2494740|2494740 2494965|2515854|2494825|2494825|2521422 TGATAT 6mer3-8 dme-miR-283-5p 2R - 2494781 2494811 3'utr MFS17 FlyBase G14656.1 AAATTAAAACTGTTATACCAAATTTGATATA 10 2494788 0.67136309 4 10 77 1 1.230448921 0 0.4 0.647058824 10 0 0 17 2R:2494781-2494811 6 12 1620 FBgn0058263 777.1033333 67.95666667 103.9733333 0.015441962 0.176583117 0.115414209 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 24959960 24959965 - 2R_24959960_24959965_- 0.75536286 0.755362975 0.755362918 7.07E-08 CG2765 FBtr0113119|FBtr0113119|FBtr0113119|FBtr0308687|FBtr0308687|FBtr0308687|FBtr0308686|FBtr0308686|FBtr0308686|FBtr0113118|FBtr0113118|FBtr0113118 24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839 24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846 2R - 24959930 24959996 3'utr CG2765 FlyBase G26547.2 AAATCCCACCAAAGGTGACCTGGATACCCGACTGTGAGTCCCTGGTTCGGCAACGAGGACTGCAGAG 41 24959951 0.916515296 7 39 190 0.93877551 1.361727836 0.265306122 0.170731707 0.306122449 41 2 1 46 2R:24959930-24959996 6 CG2765 FBtr0308686|FBtr0308686|FBtr0308686|FBtr0113118|FBtr0113118|FBtr0113118|FBtr0113119|FBtr0113119|FBtr0113119|FBtr0308687|FBtr0308687|FBtr0308687 24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839 24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 24959932 24959993 3'utr CG2765 FlyBase G20073.1 TCCCACCAAAGGTGACCTGGATACCCGACTGTGAGTCCCTGGTTCGGCAACGAGGACTGCAG 30 24959951 0.947729707 9 25 147 0.830188679 1.166331422 0.471698113 0.466666667 0.698113208 30 7 2 44 2R:24959932-24959993 6 28.5 1621 FBgn0035087 3658.343333 190.7466667 291.4366667 0.007790412 0.149412834 0.097791401 -14 -14 -14 0.1 dme-miR-13b-2-5p 7mer-m1 TTGACGC 2R 24991134 24991140 - 2R_24991134_24991140_- 0.829692068 0.829692036 0.829692052 7.07E-08 zip FBtr0302575 24990946 24991607 2R - 24991025 24991163 stop_codon zip FlyBase G26564.1 TTAGATGGAGAGGATTCTGCCAATTGACGCGTTAATTATTAGATGAAGAAAAAGTTGAATCGCAGGAAGAAGGTGATGATGAAGAGCAAAATAAACGATTATATTTAATGTTTCTTTTATATAATTTCTCTGTTATTTT 31 24991140 0.972058515 12 31 191 1 1.591064607 0.230769231 0.193548387 0.358974359 31 0 0 39 2R:24991025-24991163 7 zip FBtr0302575 24990946 24991607 TTGACGC 7mer-m1 dme-miR-13b-2-5p 2R - 24991057 24991170 stop_codon zip FlyBase G20095.1 TGAATCATTAGATGGAGAGGATTCTGCCAATTGACGCGTTAATTATTAGATGAAGAAAAAGTTGAATCGCAGGAAGAAGGTGATGATGAAGAGCAAAATAAACGATTATATTTA 27 24991140 0.909120612 11 26 136 0.972222222 1.544068044 0.444444444 0.259259259 0.444444444 27 1 0 35 2R:24991057-24991170 7 15 1622 FBgn0265434 6756.406667 120.88 185.8533333 0.002220115 0.124090007 0.080708803 0 0 0 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 25073733 25073738 - 2R_25073733_25073738_- 1 0.999981417 0.999990709 1.32E-05 gol FBtr0300178 25073667 25074917 2R - 25073723 25073752 3'utr gol FlyBase G26605.1 TGAAACAAGACCATGCTGTGCTAGACACCT 25 25073739 0.704674315 3 25 85 1 1.477121255 0 0.2 0.333333333 25 0 0 30 2R:25073723-25073752 6 gol FBtr0300178 25073667 25074917 GCTGTG 6mer2-7 dme-miR-1008-3p 2R - 25073723 25073760 3'utr gol FlyBase G20122.1 ACCAACTTTGAAACAAGACCATGCTGTGCTAGACACCT 23 25073731 0.817010128 3 21 89 0.897435897 0.942008053 0.025641026 0.47826087 0.692307692 23 1 3 35 2R:25073723-25073760 6 24 1623 FBgn0004919 407.4766667 15.40666667 23.45 0.058899078 1.5577672 1.023454158 1 -7 -3 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 25073939 25073946 - 2R_25073939_25073946_- 0.625355008 0.625360545 0.625357777 3.89E-06 gol FBtr0300178 25073667 25074917 2R - 25073929 25073988 3'utr gol FlyBase G26606.1 CATTTTTATGTACTTACATTATTATTGCTTAATTCGTTTGATTGCATTTATTTTTCAATT 165 25073947 0.815672286 8 163 2036 0.987068966 2.359835482 0.409482759 0.303030303 0.504310345 165 3 0 229 2R:25073929-25073988 8 gol FBtr0300178 25073667 25074917 TGCATTTA 8mer-A1 dme-miR-277-3p 2R - 25073890 25073987 3'utr gol FlyBase G20123.1 ATTTTTATGTACTTACATTATTATTGCTTAATTCGTTTGATTGCATTTATTTTTCAATTGTTTTTATAGCTCATACATAAATTATTTATATTCCATTT 103 25073947 0.992849771 9 102 1278 0.985915493 2.146128036 0.35915493 0.281553398 0.478873239 103 2 0 140 2R:25073890-25073987 8 126 1624 FBgn0004919 407.4766667 15.40666667 23.45 0.30922016 8.178277802 5.373134328 1 1 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 2R 25074028 25074033 - 2R_25074028_25074033_- 0.580825412 0.587566777 0.584196094 0.00476689 gol FBtr0300178 25073667 25074917 2R - 25074000 25074085 3'utr gol FlyBase G26607.1 AATCGCAGCCAGCGCATATTGTGAATCAATGACTGCTGTAATATCACAGGTGCCAAAGTATTTGCTTTTAGTTTTTTATATTAAAT 47 25074053 0.880427914 13 45 297 0.950819672 1.286306739 0.180327869 0.276595745 0.442622951 47 1 2 58 2R:25074000-25074085 6 gol FBtr0300178 25073667 25074917 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 25074012 25074169 3'utr gol FlyBase G20124.1 AAGCTGTAGAAAAGGTAATGGTAAATGCAATAAATATAGCAAGATCACCGACTGTGTTGCTAGTCACCCATAGACGGCTACACAAATCGCAGCCAGCGCATATTGTGAATCAATGACTGCTGTAATATCACAGGTGCCAAAGTATTTGCTTTTAGTTT 63 25074049 0.814913105 23 62 377 0.978947368 1.968482949 0.189473684 0.428571429 0.621052632 63 2 0 93 2R:25074012-25074169 6 12 1625 FBgn0004919 407.4766667 15.40666667 23.45 0.029449539 0.7788836 0.511727079 20 16 18 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2R 25074104 25074110 - 2R_25074104_25074110_- 0.821281105 0.816933099 0.819107102 0.0030745 gol FBtr0300178|FBtr0306330 25073667|25072625 25074917|25074917 2R - 25074086 25074153 3'utr gol FlyBase G26607.2 AATGGTAAATGCAATAAATATAGCAAGATCACCGACTGTGTTGCTAGTCACCCATAGACGGCTACACA 30 25074113 0.816100577 11 27 161 0.885714286 1.014240439 0 0.166666667 0.285714286 30 2 2 31 2R:25074086-25074153 7 gol FBtr0300178|FBtr0306330 25073667|25072625 25074917|25074917 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R - 25074012 25074169 3'utr gol FlyBase G20124.1 AAGCTGTAGAAAAGGTAATGGTAAATGCAATAAATATAGCAAGATCACCGACTGTGTTGCTAGTCACCCATAGACGGCTACACAAATCGCAGCCAGCGCATATTGTGAATCAATGACTGCTGTAATATCACAGGTGCCAAAGTATTTGCTTTTAGTTT 63 25074114 0.814913105 23 62 377 0.978947368 1.968482949 0.189473684 0.428571429 0.621052632 63 2 0 93 2R:25074012-25074169 7 20 1626 FBgn0004919 407.4766667 15.40666667 23.45 0.049082565 1.298139334 0.852878465 3 4 3.5 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 25074446 25074453 - 2R_25074446_25074453_- 0.499484363 0.500105125 0.499794744 0.000438901 gol FBtr0300178|FBtr0306330 25073667|25072625 25074917|25074917 2R - 25074421 25074480 3'utr gol FlyBase G26609.3 GTGTAAATAAACTCATTTAAGAGCAGTGTACTTAAAAAAGCTGATACAAAGACTTCCATT 379 25074454 0.887832611 12 373 1733 0.984581498 2.650307523 0.085903084 0.166226913 0.303964758 379 7 0 447 2R:25074421-25074480 8 gol FBtr0300178|FBtr0306330 25073667|25072625 25074917|25074917 GTACTTAA 8mer-A1 dme-miR-252-5p 2R - 25074423 25074480 3'utr gol FlyBase G20126.1 GTGTAAATAAACTCATTTAAGAGCAGTGTACTTAAAAAAGCTGATACAAAGACTTCCA 273 25074454 0.880422527 9 267 1120 0.990049751 2.599883072 0.07960199 0.380952381 0.57960199 273 4 0 398 2R:25074423-25074480 8 318.5 1627 FBgn0004919 407.4766667 15.40666667 23.45 0.781639848 20.67286889 13.58208955 1 1 1 0.1 dme-miR-34-5p 6mer2-7 ACTGCC 2R 3900374 3900379 - 2R_3900374_3900379_- 0.999894291 0.997029194 0.998461742 0.002025932 uex FBtr0302226 3900283 3900785 2R - 3900355 3900412 3'utr uex FlyBase G19352.1 TTAGAAGGGCTAAACTCGATGTTAAAAAAATAAACTGCCTGTTTAACTGTATTCCTTA 21 3900371 0.928757019 9 17 173 0.869565217 1 0.043478261 0.095238095 0.173913043 21 2 1 20 2R:3900355-3900412 6 uex FBtr0302226 3900283 3900785 ACTGCC 6mer2-7 dme-miR-34-5p 2R - 3900327 3900436 3'utr uex FlyBase G14709.1 AGTTAATCTTCCTTAGAAATGGTTTTAGAAGGGCTAAACTCGATGTTAAAAAAATAAACTGCCTGTTTAACTGTATTCCTTATTAAACTTAAATGTGTTTGTGAACACAG 20 3900372 0.850428671 11 17 157 1 1.505149978 0.09375 0.5 0.6875 20 0 0 32 2R:3900327-3900436 6 11.5 1628 FBgn0262124 3391.336667 116.7833333 178.7433333 0.003390993 0.098472956 0.064338064 -8 -7 -7.5 0.1 dme-miR-79-3p 7mer-m8 TAGCTTT 2R 3900593 3900599 - 2R_3900593_3900599_- 0.620204014 0.62020403 0.620204022 0 uex FBtr0302226 3900283 3900785 2R - 3900577 3900671 3'utr uex FlyBase G19353.1 ACAATTTTTATACTATACCATAGGTTTTCCCATATTAATTATATTCCTAAACATCTTAAACATAAAAAAAAATAGCTTTTCCAAAACTGTGTATG 17 3900599 0.983686956 7 13 101 0.833333333 0.875061263 0 0.058823529 0.111111111 17 2 1 15 2R:3900577-3900671 7 uex FBtr0302226 3900283 3900785 TAGCTTT 7mer-m8 dme-miR-79-3p 2R - 3900565 3900608 3'utr uex FlyBase G14711.1 AAAAAAAAATAGCTTTTCCAAAACTGTGTATGAATTTATATATA 7 3900594 0.981558222 3 6 46 0.888888889 0.903089987 0 0.285714286 0.444444444 7 1 0 8 2R:3900565-3900608 7 9 1629 FBgn0262124 3391.336667 116.7833333 178.7433333 0.002653821 0.077065791 0.050351528 0 -5 -2.5 0.1 dme-miR-33-5p 6mer2-7 AATGCA 2R 3900774 3900779 - 2R_3900774_3900779_- 0.998721254 0.998725403 0.998723328 2.90E-06 uex FBtr0302226 3900283 3900785 2R - 3900757 3900803 stop_codon uex FlyBase G19354.1 AAGCAAAGTAAGCCCTAAACACAAAATGCAGGCCACATTTATATATA 47 3900777 0.993770549 2 44 124 0.979166667 1.672097858 0.0625 0.043478261 0.083333333 46 1 0 47 2R:3900757-3900803 6 uex FBtr0302226 3900283 3900785 AATGCA 6mer2-7 dme-miR-33-5p 2R - 3900739 3900804 stop_codon uex FlyBase G14712.1 CAAGCAAAGTAAGCCCTAAACACAAAATGCAGGCCACATTTATATATATGCAGTTAATAAAATAAT 14 3900777 0.999498379 3 14 60 1 1.278753601 0 0.214285714 0.421052632 14 0 0 19 2R:3900739-3900804 6 27 1630 FBgn0262124 3391.336667 116.7833333 178.7433333 0.007961463 0.231197374 0.151054585 -2 -2 -2 0.1 dme-miR-305-5p 6mer3-8 AGTACA 2R 4564541 4564546 + 2R_4564541_4564546_+ 1 1 1 0 Stlk FBtr0111111|FBtr0308810 4564500|4564500 4565281|4564987 2R + 4564514 4564553 3'utr Stlk FlyBase G12823.1 TGTTTTTCTGATCACTTCGGTGCCTTTAGTACAGAATCTA 19 4564539 0.599846623 7 19 150 1 1.431363764 0.407407407 0.315789474 0.518518519 19 0 0 27 2R:4564514-4564553 6 Stlk FBtr0111111|FBtr0308810 4564500|4564500 4565281|4564987 AGTACA 6mer3-8 dme-miR-305-5p 2R + 4564519 4564555 3'utr Stlk FlyBase G9785.1 TTCTGATCACTTCGGTGCCTTTAGTACAGAATCTACA 13 4564540 0.626645518 5 12 104 0.954545455 1.322219295 0 0.461538462 0.681818182 13 1 0 21 2R:4564519-4564555 6 14.5 1631 FBgn0046692 309.34 20.17666667 30.87 0.04687399 0.718651908 0.469711694 2 1 1.5 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA 2R 4564607 4564612 + 2R_4564607_4564612_+ 0.942236055 0.952131314 0.947183685 0.006996963 Stlk FBtr0111111|FBtr0308810 4564500|4564500 4565281|4564987 2R + 4564578 4564629 3'utr Stlk FlyBase G12824.1 ATTTATTTAGGGGTTTAGAACAGCTGACTGTGCAAAAATTAAATTTATGTAT 388 4564602 0.92797494 9 380 2315 0.982142857 2.166331422 0.011160714 0.134020619 0.25 388 6 2 440 2R:4564578-4564629 6 Stlk FBtr0111111|FBtr0308810 4564500|4564500 4565281|4564987 GTGCAA 6mer3-8 dme-miR-92b-3p 2R + 4564565 4564628 3'utr Stlk FlyBase G9786.1 ATTCTTGCTTTCTATTTATTTAGGGGTTTAGAACAGCTGACTGTGCAAAAATTAAATTTATGTA 221 4564602 0.95032688 6 212 1191 0.967065868 2.208172527 0.020958084 0.393665158 0.598802395 221 10 1 323 2R:4564565-4564628 6 301 1632 FBgn0046692 309.34 20.17666667 30.87 0.973039374 14.91822237 9.750566893 5 5 5 0.1 dme-miR-283-5p 7mer-m8 TGATATT 2R 4673393 4673399 + 2R_4673393_4673399_+ 0.613361996 0.613325263 0.613343629 2.60E-05 CG17883 FBtr0111292 4673085 4673639 2R + 4673320 4673409 3'utr CG17883 FlyBase G12880.1 CGTCAACCGGCCACATCGAATAGAATTCCTATCATAACGAAATGGCTTCCAAATATTTTAACAGCAAAGCCGGTGATATTGACAACAGCA 34 4673398 0.941976783 6 33 135 0.975609756 1.301029996 0.195121951 0.176470588 0.317073171 34 0 1 40 2R:4673320-4673409 7 CG17883 FBtr0111292 4673085 4673639 TGATATT 7mer-m8 dme-miR-283-5p 2R + 4673332 4673409 3'utr CG17883 FlyBase G9826.1 ACATCGAATAGAATTCCTATCATAACGAAATGGCTTCCAAATATTTTAACAGCAAAGCCGGTGATATTGACAACAGCA 20 4673398 0.944382007 5 20 83 1 1.462397998 0.206896552 0.35 0.551724138 20 0 0 29 2R:4673332-4673409 7 23 1633 FBgn0040005 878.32 65.69666667 100.4666667 0.026186356 0.350093866 0.228931652 -5 -5 -5 0.1 dme-miR-8-3p 7mer-m8 CAGTATT 2R 4673452 4673458 + 2R_4673452_4673458_+ 0.627610744 0.639747248 0.633678996 0.008581801 CG17883 FBtr0111292 4673085 4673639 2R + 4673415 4673474 3'utr CG17883 FlyBase G12881.1 TATTGTAGTGGGTGTATGTGCCTATTATTACAATAACCAGTATTTGGCGGCAGGTATAAG 20 4673459 0.971812836 5 20 123 1 1.361727836 0.434782609 0.1 0.217391304 20 0 0 23 2R:4673415-4673474 7 CG17883 FBtr0111292 4673085 4673639 CAGTATT 7mer-m8 dme-miR-8-3p 2R + 4673416 4673478 stop_codon CG17883 FlyBase G9827.1 ATTGTAGTGGGTGTATGTGCCTATTATTACAATAACCAGTATTTGGCGGCAGGTATAAGCTGA 13 4673459 0.976439895 4 13 88 1 1.397940009 0.32 0.384615385 0.68 13 0 0 25 2R:4673416-4673478 7 15.5 1634 FBgn0040005 878.32 65.69666667 100.4666667 0.017647327 0.235932823 0.154280027 -7 -7 -7 0.1 dme-miR-276a-3p 6mer2-7 GTTCCT 2R 4673515 4673520 + 2R_4673515_4673520_+ 0.994739019 1 0.997369509 0.003720089 CG17883 FBtr0111291|FBtr0334995|FBtr0111292|FBtr0334996 4673477|4673477|4673085|4673477 4673639|4673639|4673639|4673639 2R + 4673497 4673583 3'utr CG17883 FlyBase G12882.1 ATATCGACATTTAAATTTGTTCCTTATACCGCGGTATAATCACATTCTCCCGAAATTCTGTGTTTTGGTGAAGACCTTATTTTAATA 26 4673514 0.747296779 11 23 240 0.941176471 1.505149978 0.147058824 0.192307692 0.382352941 26 2 0 32 2R:4673497-4673583 6 CG17883 FBtr0334996|FBtr0111292|FBtr0334995|FBtr0111291 4673477|4673085|4673477|4673477 4673639|4673639|4673639|4673639 GTTCCT 6mer2-7 dme-miR-276a-3p 2R + 4673505 4673533 3'utr CG17883 FlyBase G9828.1 ATTTAAATTTGTTCCTTATACCGCGGTAT 7 4673521 0.708839233 4 6 65 0.9 0.954242509 0.2 0.428571429 0.6 7 1 0 9 2R:4673505-4673533 6 9 1635 FBgn0040005 878.32 65.69666667 100.4666667 0.010246835 0.136993252 0.089581951 1 -6 -2.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 2R 4817380 4817385 - 2R_4817380_4817385_- 1 1 1 0 CG17528 FBtr0111277 4815424 4817448 2R - 4817356 4817429 3'utr CG17528 FlyBase G19500.1 AAAAAAAGCAACTTTCACTCTTAAACGACGAACTTTTGTATTTCTGATCTAAAAATGCTTTTATATTAGCCCTA 38 4817386 0.863462485 11 37 295 1 1.591064607 0.128205128 0.054054054 0.102564103 37 0 0 39 2R:4817356-4817429 6 CG17528 FBtr0111277|FBtr0111274 4815424|4817259 4817448|4817448 TGATCT 6mer3-8 dme-bantam-3p 2R - 4817349 4817428 3'utr CG17528 FlyBase G14816.1 AAAAAAGCAACTTTCACTCTTAAACGACGAACTTTTGTATTTCTGATCTAAAAATGCTTTTATATTAGCCCTAATTTATT 26 4817386 0.984012037 10 24 207 0.976190476 1.311753861 0.119047619 0.423076923 0.642857143 26 0 1 41 2R:4817349-4817428 6 18 1636 FBgn0261387 730.0966667 30.65666667 47.04333333 0.02465427 0.587147983 0.382625948 1 1 1 0.1 dme-miR-92b-3p 7mer-A1 TGCAATA 2R 5117426 5117432 - 2R_5117426_5117432_- 0.76889004 0.77166844 0.77027924 0.001964625 gus FBtr0309850|FBtr0309846|FBtr0309848|FBtr0309851 5117211|5117211|5116988|5117211 5117662|5117662|5117662|5117662 2R - 5117356 5117628 NoAnnotation G19516.1 TTTTTGCTGCATGTGATGAAAGCAGCAAATACTAATTGTGTTAGATTATAATAGTATTAGATCAATGTTTGTCTGTCCTCCAACAGGAAAATCATAGGTATACAATTCGTAATAATACTTTACTTAAGCTATAAAGATTGATTGTATATTAAGAAGCATTCAAATAATAGTATGTACACGGAATGACATCTCATCTTGCAATAAATTGGAGAATCGAGTTTCTTCATGTAACATTATTTAAAAACTATACTCACTTCGTGTTATATAAAAAGC 279 5117445 0.969244809 47 268 2013 0.964285714 1.846337112 0.090659341 0.222222222 0.403846154 279 9 4 351 2R:5117356-5117628 7 gus FBtr0309846|FBtr0309852|FBtr0309849|FBtr0309850|FBtr0309847|FBtr0309848|FBtr0309851 5117211|5117330|5117330|5117211|5117392|5116988|5117211 5117662|5117662|5117662|5117662|5117662|5117662|5117662 TGCAATA 7mer-A1 dme-miR-92b-3p 2R - 5117401 5117629 3'utr gus FlyBase G14831.1 ATTTTTGCTGCATGTGATGAAAGCAGCAAATACTAATTGTGTTAGATTATAATAGTATTAGATCAATGTTTGTCTGTCCTCCAACAGGAAAATCATAGGTATACAATTCGTAATAATACTTTACTTAAGCTATAAAGATTGATTGTATATTAAGAAGCATTCAAATAATAGTATGTACACGGAATGACATCTCATCTTGCAATAAATTGGAGAATCGAGTTTCTTCATG 177 5117445 0.982343248 37 170 1275 0.960784314 2.389166084 0.094117647 0.299435028 0.51372549 177 10 0 245 2R:5117401-5117629 7 91 1637 FBgn0026238 600.2866667 48.80333333 74.76 0.151594238 1.864626733 1.217228464 13 13 13 0.1 dme-miR-1003-3p 8mer-A1 ATGTGAGA 2R 5154671 5154678 + 2R_5154671_5154678_+ 0.643565845 0.643565845 0.643565845 0 Atf6 FBtr0086080|FBtr0086079 5154029|5154029 5154756|5154756 2R + 5154646 5154696 3'utr Atf6 FlyBase G12959.1 TAAGTTTTATTAATTAAAACAGCCTATGTGAGAGATGTAGTTTTGTAAAAT 11 5154671 0.976339266 4 11 78 1 1.113943352 0.230769231 0.181818182 0.307692308 11 0 0 13 2R:5154646-5154696 8 Atf6 FBtr0086079|FBtr0086080 5154029|5154029 5154756|5154756 ATGTGAGA 8mer-A1 dme-miR-1003-3p 2R + 5154656 5154696 3'utr Atf6 FlyBase G9888.1 TAATTAAAACAGCCTATGTGAGAGATGTAGTTTTGTAAAAT 8 5154673 0.986396505 4 7 54 0.916666667 1.041392685 0.25 0.375 0.583333333 8 1 0 11 2R:5154656-5154696 8 9.5 1638 FBgn0033010 930.9533333 36.95333333 56.66 0.010204593 0.257081003 0.167666784 0 -2 -1 0.1 dme-miR-999-3p 6mer3-8 AGTTAA 2R 5295929 5295934 + 2R_5295929_5295934_+ 0.999999865 0.999999993 0.999999929 7.07E-08 d4 FBtr0086082|FBtr0335258|FBtr0086083|FBtr0111115 5295893|5295893|5295893|5295893 5295965|5295965|5295965|5295965 2R + 5295925 5295954 3'utr d4 FlyBase G12979.1 TATAAGTTAATCTTCTCATAAATATAAAAA 14 5295932 0.829688727 6 11 112 0.785714286 0.740362689 0 0 0 14 2 1 11 2R:5295925-5295954 6 d4 FBtr0086083|FBtr0111115|FBtr0086082|FBtr0335258 5295893|5295893|5295893|5295893 5295965|5295965|5295965|5295965 AGTTAA 6mer3-8 dme-miR-999-3p 2R + 5295917 5295956 3'utr d4 FlyBase G9903.1 TCACCAATTATAAGTTAATCTTCTCATAAATATAAAAAAC 14 5295932 0.706228405 5 13 122 0.882352941 1.176091259 0.058823529 0.214285714 0.352941176 14 2 0 15 2R:5295917-5295956 6 14 1639 FBgn0033015 779.7666667 52.91333333 81.00666667 0.017954089 0.264583596 0.172825282 -3 -3 -3 0.1 dme-miR-34-5p 8mer-A1 CACTGCCA 2R 5447156 5447163 + 2R_5447156_5447163_+ 0.678407898 0.678403701 0.678405799 2.97E-06 laccase2 FBtr0299918|FBtr0301063 5446975|5446975 5447974|5447298 2R + 5447113 5447171 3'utr laccase2 FlyBase G13033.1 ATTTAAAACGCACAATGCACTGTTTTTATTTAATAATTTTAAACACTGCCAATGTCCAA 17 5447150 0.981495538 9 16 121 1 1.230448921 0.058823529 0 0 17 0 0 17 2R:5447113-5447171 8 laccase2 FBtr0301063|FBtr0299918 5446975|5446975 5447298|5447974 CACTGCCA 8mer-A1 dme-miR-34-5p 2R + 5447114 5447168 3'utr laccase2 FlyBase G9945.1 TTTAAAACGCACAATGCACTGTTTTTATTTAATAATTTTAAACACTGCCAATGTC 8 5447142 0.983091335 8 8 63 1 1.176091259 0.2 0.5 0.733333333 8 0 0 15 2R:5447114-5447168 8 9 1640 FBgn0259247 554.2366667 21.22 32.31 0.01623855 0.424128181 0.278551532 6 14 10 0.1 dme-miR-276a-3p 6mer3-8 AGTTCC 2R 5609670 5609675 + 2R_5609670_5609675_+ 0.977681334 0.999997599 0.988839467 0.015780007 CG17508 FBtr0307172 5609514 5609994 2R + 5609632 5609738 3'utr CG17508 FlyBase G13043.1 CTGCATATATCAGGAACTCATTCTAAGGATTGGCTTTCAGTTCCCAGGAACCCTATTATATAGAAATTAGAATTGACCAAAGAATTTATTAAATTGCAAGAAAACCG 49 5609661 0.915205379 17 46 354 0.925925926 1.698970004 0.074074074 0.102040816 0.185185185 49 4 0 50 2R:5609632-5609738 6 CG17508 FBtr0307172 5609514 5609994 AGTTCC 6mer3-8 dme-miR-276a-3p 2R + 5609638 5609724 3'utr CG17508 FlyBase G9956.1 ATATCAGGAACTCATTCTAAGGATTGGCTTTCAGTTCCCAGGAACCCTATTATATAGAAATTAGAATTGACCAAAGAATTTATTAAA 30 5609661 0.877027844 14 30 207 1 1.653212514 0.111111111 0.333333333 0.555555556 30 0 0 45 2R:5609638-5609724 6 15 1641 FBgn0039970 517.7666667 53.29333333 81.50333333 0.028970579 0.281461096 0.184041552 9 9 9 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 2R 5609707 5609714 + 2R_5609707_5609714_+ 0.622831679 0.641492432 0.632162055 0.013195108 CG17508 FBtr0307172 5609514 5609994 2R + 5609632 5609738 3'utr CG17508 FlyBase G13043.1 CTGCATATATCAGGAACTCATTCTAAGGATTGGCTTTCAGTTCCCAGGAACCCTATTATATAGAAATTAGAATTGACCAAAGAATTTATTAAATTGCAAGAAAACCG 49 5609704 0.915205379 17 46 354 0.925925926 1.698970004 0.074074074 0.102040816 0.185185185 49 4 0 50 2R:5609632-5609738 8 CG17508 FBtr0307172 5609514 5609994 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 5609638 5609724 3'utr CG17508 FlyBase G9956.1 ATATCAGGAACTCATTCTAAGGATTGGCTTTCAGTTCCCAGGAACCCTATTATATAGAAATTAGAATTGACCAAAGAATTTATTAAA 30 5609704 0.877027844 14 30 207 1 1.653212514 0.111111111 0.333333333 0.555555556 30 0 0 45 2R:5609638-5609724 8 18 1642 FBgn0039970 517.7666667 53.29333333 81.50333333 0.034764695 0.337753315 0.220849863 3 3 3 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 2R 5609762 5609767 + 2R_5609762_5609767_+ 0.999999816 0.999999975 0.999999895 1.41E-07 CG17508 FBtr0307172 5609514 5609994 2R + 5609751 5609793 3'utr CG17508 FlyBase G13044.1 AAATAGACAATTGTGTTTGGAGTGGGCATGCCCAACGTATTTT 10 5609761 0.761410487 7 10 61 1 1.041392685 0.181818182 0.1 0.181818182 10 0 0 11 2R:5609751-5609793 6 CG17508 FBtr0307172 5609514 5609994 TGTGTT 6mer3-8 dme-miR-317-3p 2R + 5609734 5609777 3'utr CG17508 FlyBase G9957.1 AACCGAAACAAAGTGTGAAATAGACAATTGTGTTTGGAGTGGGC 5 5609754 0.962587751 3 5 27 1 0.903089987 0 0.2 0.5 5 0 0 8 2R:5609734-5609777 6 5.5 1643 FBgn0039970 517.7666667 53.29333333 81.50333333 0.010622546 0.103202402 0.067481903 1 8 4.5 0.1 dme-miR-304-5p 6mer2-7 GAGATT 2R 5609875 5609880 + 2R_5609875_5609880_+ 0.952560336 0.998447506 0.975503921 0.03244715 CG17508 FBtr0307172 5609514 5609994 2R + 5609797 5609895 3'utr CG17508 FlyBase G13045.1 AATACCATCTTTTTAGCTTTTTGAGGTATAAATATTTGGACTTTCATACGGACGGACATGAACAGATCGATCCTGATAGAGATTCAAGTCTAAAACACT 97 5609880 0.796595566 7 95 534 0.981981982 1.736396502 0.027027027 0.12371134 0.234234234 97 1 1 109 2R:5609797-5609895 6 CG17508 FBtr0307172 5609514 5609994 GAGATT 6mer2-7 dme-miR-304-5p 2R + 5609819 5609894 3'utr CG17508 FlyBase G9958.1 GAGGTATAAATATTTGGACTTTCATACGGACGGACATGAACAGATCGATCCTGATAGAGATTCAAGTCTAAAACAC 41 5609880 0.762003628 8 40 216 0.969230769 1.799340549 0.061538462 0.512195122 0.692307692 41 2 0 63 2R:5609819-5609894 6 61.5 1644 FBgn0039970 517.7666667 53.29333333 81.50333333 0.118779373 1.153990493 0.754570365 -5 -5 -5 0.1 dme-miR-968-5p 6mer3-8 ACTACT 2R 5611502 5611507 + 2R_5611502_5611507_+ 0.997857507 0.983319603 0.990588555 0.010279848 CG17508 FBtr0086071 5611404 5611586 2R + 5611480 5611522 3'utr CG17508 FlyBase G13049.1 TGTTTATTTGTAGGAAAAGCGTACTACTACCATCTAGGCAGAT 19 5611507 0.736771137 5 19 104 1 1.301029996 0.25 0.052631579 0.1 19 0 0 20 2R:5611480-5611522 6 CG17508 FBtr0086071 5611404 5611586 ACTACT 6mer3-8 dme-miR-968-5p 2R + 5611482 5611520 3'utr CG17508 FlyBase G9963.1 TTTATTTGTAGGAAAAGCGTACTACTACCATCTAGGCAG 8 5611507 0.967638005 2 7 40 0.846153846 1.041392685 0.769230769 0.5 0.692307692 8 2 0 11 2R:5611482-5611520 6 13.5 1645 FBgn0039970 517.7666667 53.29333333 81.50333333 0.026073521 0.253314986 0.165637397 -5 -5 -5 0.1 dme-miR-2b-2-5p 6mer2-7 TGAAGA 2R 5641928 5641933 - 2R_5641928_5641933_- 0.965451415 0.947099469 0.956275442 0.012976753 CG11665 FBtr0345359|FBtr0086072 5640913|5641671 5642010|5642010 2R - 5641879 5641935 3'utr CG11665 FlyBase G19630.1 GATGAAGATAGCAGCCAGGACTAAAAGACCATTAACATTTTTTGTAACCTTTGATTC 6 5641927 0.982355838 4 5 40 0.833333333 0.698970004 0.333333333 0 0 6 1 0 5 2R:5641879-5641935 6 CG11665 FBtr0086072|FBtr0345359 5641671|5640913 5642010|5642010 TGAAGA 6mer2-7 dme-miR-2b-2-5p 2R - 5641907 5642004 3'utr CG11665 FlyBase G14916.1 AAACAACTCTCGTACCAAACCACGTACAATAACAATTAGATTTAAGGCTTAAAACGGCGTACAAACAGTGATGAAGATAGCAGCCAGGACTAAAAGAC 16 5641927 0.995509404 5 14 63 0.923076923 1.380211242 0.346153846 0.4375 0.653846154 16 2 0 24 2R:5641907-5642004 6 3.5 1646 FBgn0033028 1073.073333 45.70666667 69.74666667 0.00326166 0.076575263 0.05018161 -6 -6 -6 0.1 dme-miR-14-3p 6mer2-7 AGACTG 2R 5656095 5656100 + 2R_5656095_5656100_+ 1 0.999999999 1 0 CG1344 FBtr0331967 5655809 5656778 2R + 5656046 5656228 3'utr CG1344 FlyBase G13063.1 TTCTCGTTCGCACTCCCACCAGCTGATTGTAATGGGTAGTCGGAGAACTAGACTGTAAAGTTTTCTCTTGTTTGTTCCTTTTTTTGTCCTAACAAATAAATGCTTGCTTACTTTTGTATTATAAAAAATCGACACCTCGGTATTTTTGTTTTTGATTAAGACTTAGTAATAGAATTGTAATCG 107 5656094 0.890763443 19 99 787 0.929133858 1.594760753 0.220472441 0.177570093 0.307086614 107 7 2 118 2R:5656046-5656228 6 CG1344 FBtr0331967 5655809 5656778 AGACTG 6mer2-7 dme-miR-14-3p 2R + 5656075 5656117 3'utr CG1344 FlyBase G9977.1 TAATGGGTAGTCGGAGAACTAGACTGTAAAGTTTTCTCTTGTT 22 5656101 0.766819584 4 21 134 1 1.477121255 0.1 0.227272727 0.433333333 22 0 0 30 2R:5656075-5656117 6 41 1647 FBgn0027507 843.1966667 42.83333333 65.52 0.048624481 0.957198444 0.625763126 1 -6 -2.5 0.1 dme-miR-31a-5p 6mer2-7 CTTGCC 2R 5656452 5656457 + 2R_5656452_5656457_+ 0.963908455 0.979049336 0.971478896 0.010706162 CG1344 FBtr0331967 5655809 5656778 2R + 5656409 5656475 3'utr CG1344 FlyBase G13064.1 CTATTCAATCGTCTTTATTCTGTGTTCATACATTTAAACAAGACTTGCCCTCCAAAAGCCTTGGAAA 16 5656454 0.902491671 5 15 87 0.954545455 1.322219295 0.181818182 0.25 0.454545455 16 1 0 21 2R:5656409-5656475 6 CG1344 FBtr0331967 5655809 5656778 CTTGCC 6mer2-7 dme-miR-31a-5p 2R + 5656404 5656489 3'utr CG1344 FlyBase G9979.1 TTCAACTATTCAATCGTCTTTATTCTGTGTTCATACATTTAAACAAGACTTGCCCTCCAAAAGCCTTGGAAATTTTACGTAACAAA 18 5656454 0.959291136 5 16 95 0.925925926 0.920818754 0.185185185 0.5 0.666666667 18 0 2 25 2R:5656404-5656489 6 12 1648 FBgn0027507 843.1966667 42.83333333 65.52 0.014231555 0.280155642 0.183150183 -2 -2 -2 0.1 dme-miR-308-3p 8mer-m1 CTGTGATT 2R 5656725 5656732 + 2R_5656725_5656732_+ 0.38539341 0.385560641 0.385477025 0.000118228 CG1344 FBtr0331967 5655809 5656778 2R + 5656694 5656737 3'utr CG1344 FlyBase G13066.1 CAGGTTATATGAGATTGTTTTTGAAAGCCCTCTGTGATTTCTTA 13 5656732 0.803696331 3 13 109 1 1.255272505 0.111111111 0.307692308 0.5 13 0 0 18 2R:5656694-5656737 8 CG1344 FBtr0331967 5655809 5656778 CTGTGATT 8mer-m1 dme-miR-308-3p 2R + 5656715 5656736 3'utr CG1344 FlyBase G9980.1 TGAAAGCCCTCTGTGATTTCTT 6 5656732 0.611158745 2 6 43 1 0.903089987 0 0.166666667 0.375 6 0 0 8 2R:5656715-5656736 8 7.5 1649 FBgn0027507 843.1966667 42.83333333 65.52 0.008894722 0.175097276 0.114468864 -7 -7 -7 0.1 dme-miR-283-5p 7mer-A1 GATATTA 2R 5677561 5677567 - 2R_5677561_5677567_- 0.782882034 0.782911824 0.782896929 2.11E-05 scaf FBtr0086061|FBtr0086060 5676748|5676748 5677716|5677716 2R - 5677559 5677606 3'utr scaf FlyBase G19676.1 ATTGCAATTTCGTTGGAGCTCAAAATGGAGGGCATTCCCGATATTATC 10 5677572 0.730026474 6 10 64 1 1.113943352 0 0.2 0.384615385 10 0 0 13 2R:5677559-5677606 7 scaf FBtr0086061|FBtr0086060 5676748|5676748 5677716|5677716 GATATTA 7mer-A1 dme-miR-283-5p 2R - 5677559 5677590 3'utr scaf FlyBase G14949.1 AGCTCAAAATGGAGGGCATTCCCGATATTATC 5 5677581 0.856020247 4 5 27 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2R:5677559-5677590 7 4.5 1650 FBgn0033033 687.87 27.26 41.96666667 0.006541934 0.165077036 0.107227959 5 14 9.5 0.1 dme-miR-190-5p 6mer3-8 ACATAT 2R 5704961 5704966 + 2R_5704961_5704966_+ 0.967175288 0.999999927 0.983587608 0.023210497 vlc FBtr0307530|FBtr0300503|FBtr0086039|FBtr0086040|FBtr0307531|FBtr0086041|FBtr0307532|FBtr0300502 5704918|5704918|5704918|5704918|5704918|5704918|5704918|5704918 5705439|5705439|5705439|5705439|5705439|5705439|5705439|5705439 2R + 5704905 5705002 stop_codon vlc FlyBase G13102.1 AGCAACGGAAGTTAAATAATGCTCACTGCGAATAGCAACTCATGCTTTCTATTTATACATATATTTTTAACTAACACACGTGTACCCCACAAAGGCAT 30 5704947 0.97739004 10 29 196 1 1.602059991 0.05 0.3 0.475 30 0 0 40 2R:5704905-5705002 6 vlc FBtr0307532|FBtr0300502|FBtr0307531|FBtr0086041|FBtr0086039|FBtr0086040|FBtr0307530|FBtr0300503 5704918|5704918|5704918|5704918|5704918|5704918|5704918|5704918 5705439|5705439|5705439|5705439|5705439|5705439|5705439|5705439 ACATAT 6mer3-8 dme-miR-190-5p 2R + 5704800 5705017 stop_codon vlc FlyBase G10014.1 CGTCGCGAGGCTATGACCGCAGCGGCCAAATTGAATCCCATAAATGTTGATGCCGACCCGGACGTGCCGGGAATAATTGGCGATAGTTGTGCTAATCCTAGCGTTAGCAACGGAAGTTAAATAATGCTCACTGCGAATAGCAACTCATGCTTTCTATTTATACATATATTTTTAACTAACACACGTGTACCCCACAAAGGCATACTTAAATTTATAGA 27 5704985 0.981427546 16 23 169 0.886363636 1.290034611 0.136363636 0.444444444 0.659090909 27 4 1 39 2R:5704800-5705017 6 5 1651 FBgn0259978 569 27.35666667 41.84333333 0.008787346 0.182770805 0.119493348 14 -24 -5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 2R 5705043 5705048 + 2R_5705043_5705048_+ 0.999994355 0.999999854 0.999997105 3.89E-06 vlc FBtr0307530|FBtr0300503|FBtr0086039|FBtr0086040|FBtr0307531|FBtr0086041|FBtr0307532|FBtr0300502 5704918|5704918|5704918|5704918|5704918|5704918|5704918|5704918 5705439|5705439|5705439|5705439|5705439|5705439|5705439|5705439 2R + 5705019 5705063 3'utr vlc FlyBase G13103.1 ATTTCTAGTTGAATTAATCATTTACTAGTCCCAACTAAAATTATT 18 5705040 0.702970362 6 18 137 1 1.414973348 0 0.277777778 0.5 18 0 0 26 2R:5705019-5705063 6 vlc FBtr0307532|FBtr0300502|FBtr0307531|FBtr0086041|FBtr0086039|FBtr0086040|FBtr0307530|FBtr0300503 5704918|5704918|5704918|5704918|5704918|5704918|5704918|5704918 5705439|5705439|5705439|5705439|5705439|5705439|5705439|5705439 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 2R + 5705033 5705057 3'utr vlc FlyBase G10015.1 TAATCATTTACTAGTCCCAACTAAA 10 5705040 0.639672593 4 9 53 1 1.113943352 0.076923077 0.3 0.461538462 10 0 0 13 2R:5705033-5705057 6 14 1652 FBgn0259978 569 27.35666667 41.84333333 0.024604569 0.511758255 0.334581375 3 3 3 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 5705205 5705210 + 2R_5705205_5705210_+ 0.999999738 0.999999784 0.999999761 7.07E-08 vlc FBtr0307530|FBtr0300503|FBtr0086039|FBtr0086040|FBtr0307531|FBtr0086041|FBtr0307532|FBtr0300502 5704918|5704918|5704918|5704918|5704918|5704918|5704918|5704918 5705439|5705439|5705439|5705439|5705439|5705439|5705439|5705439 2R + 5705071 5705236 3'utr vlc FlyBase G13104.1 AGCTCCTCACTGAAATCTGTCACAAGGCGTCAAATATCTAGGAGATAACGAAGTATTGTCACCAATTGCGACTTACCTAAAGTTGTTCATAAATATTGCCTTATCCGCGAAAGATTTCGCTAATTAATCAATTTGCTGTGCACATTATGTAATTGAAAATTAAAAT 144 5705203 0.806513121 24 142 1075 0.983783784 1.782950133 0.108108108 0.215277778 0.389189189 144 1 2 182 2R:5705071-5705236 6 vlc FBtr0307532|FBtr0300502|FBtr0307531|FBtr0086041|FBtr0086039|FBtr0086040|FBtr0307530|FBtr0300503 5704918|5704918|5704918|5704918|5704918|5704918|5704918|5704918 5705439|5705439|5705439|5705439|5705439|5705439|5705439|5705439 GCTGTG 6mer2-7 dme-miR-1008-3p 2R + 5705157 5705254 3'utr vlc FlyBase G10017.1 TCATAAATATTGCCTTATCCGCGAAAGATTTCGCTAATTAATCAATTTGCTGTGCACATTATGTAATTGAAAATTAAAATTACTTGATTACATATAAA 62 5705203 0.987724126 10 56 500 0.896226415 1.500602351 0.066037736 0.435483871 0.669811321 62 9 2 95 2R:5705157-5705254 6 79 1653 FBgn0259978 569 27.35666667 41.84333333 0.13884007 2.887778725 1.887994902 2 2 2 0.1 dme-miR-252-5p 7mer-m8 GTACTTA 2R 5706257 5706263 - 2R_5706257_5706263_- 0.588299702 0.588299726 0.588299714 0 ap FBtr0086058|FBtr0086059 5706200|5706200 5707932|5707932 2R - 5706196 5706456 3'utr ap FlyBase G19684.1 TATGTAACTAATATTTATTGCCCAAATTTAATAGTTAGAGACGAATTTAGTTTAGAACAGACTATACAATAAAGTCCATATGTACATGTAGTATTACGGTAAAGTAATAGCTTCGCTCAAGCATACGACCAGGTTCGTAAGCTATTAATACGAAACTGTAATTATAATCAAATCAGTAAACACTGGAAGATTTGTACTTACAAATAGTTAACTCATAAGTCTTACCATAGAAGCTTAAATAAAACGTATTCAAGCAAAAAA 822 5706264 0.770457601 64 783 6073 0.951612903 2.196820744 0.069556452 0.177615572 0.318548387 822 43 5 944 2R:5706196-5706456 7 ap FBtr0086058|FBtr0086059 5706200|5706200 5707932|5707932 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 5706195 5706449 3'utr ap FlyBase G14954.1 CTAATATTTATTGCCCAAATTTAATAGTTAGAGACGAATTTAGTTTAGAACAGACTATACAATAAAGTCCATATGTACATGTAGTATTACGGTAAAGTAATAGCTTCGCTCAAGCATACGACCAGGTTCGTAAGCTATTAATACGAAACTGTAATTATAATCAAATCAGTAAACACTGGAAGATTTGTACTTACAAATAGTTAACTCATAAGTCTTACCATAGAAGCTTAAATAAAACGTATTCAAGCAAAAAAA 615 5706264 0.831704405 58 582 4319 0.950854701 2.04630002 0.071581197 0.356097561 0.576923077 615 39 7 890 2R:5706195-5706449 7 323 1654 FBgn0000099 2 0.113333333 0.183333333 161.5 2850 1761.818182 1 1 1 0.1 dme-miR-2b-2-5p 7mer-A1 TGAAGAA 2R 5706506 5706512 - 2R_5706506_5706512_- 0.823349562 0.823349562 0.823349562 0 ap FBtr0086058|FBtr0086059 5706200|5706200 5707932|5707932 2R - 5706490 5706825 3'utr ap FlyBase G19685.2 AGTCTAGTTTACACGTATGTTCTACGAGGAACGGACCGATTGTTCCTATGAGAGCTATAGGTTTTACCATATGTATATGCATGCATTACTTCAGCTCCATCTCTTTTTGATTCATAAACGTATAATGGTTTGAGAGTAAACATTTTGTGGCGTATATAGTTCAAGTTTACATATTTAGAGTACGGTGCCCAAGACGCGCTTTAAAAATATTGAAAACGGGTTGTTAATGAAGTCCCATATGTATAATTGTCTAGGTACATGGATATTGTTAATATATTATTATTTTTATTTAAAGAGCTCTCAACAATATGTATGAAGAAATCTGCGTATATCAAC 1223 5706512 0.882054457 86 1159 8167 0.95379538 1.56880324 0.238283828 0.188216039 0.345214521 1222 32 38 1445 2R:5706490-5706825 7 ap FBtr0086058|FBtr0086059 5706200|5706200 5707932|5707932 TGAAGAA 7mer-A1 dme-miR-2b-2-5p 2R - 5706490 5706820 3'utr ap FlyBase G14955.2 AGTTTACACGTATGTTCTACGAGGAACGGACCGATTGTTCCTATGAGAGCTATAGGTTTTACCATATGTATATGCATGCATTACTTCAGCTCCATCTCTTTTTGATTCATAAACGTATAATGGTTTGAGAGTAAACATTTTGTGGCGTATATAGTTCAAGTTTACATATTTAGAGTACGGTGCCCAAGACGCGCTTTAAAAATATTGAAAACGGGTTGTTAATGAAGTCCCATATGTATAATTGTCTAGGTACATGGATATTGTTAATATATTATTATTTTTATTTAAAGAGCTCTCAACAATATGTATGAAGAAATCTGCGTATATCAAC 816 5706512 0.881105855 68 768 5229 0.941415785 1.586212104 0.260374288 0.378676471 0.587469487 816 43 29 1157 2R:5706490-5706820 7 517.5 1655 FBgn0000099 2 0.113333333 0.183333333 258.75 4566.176471 2822.727273 0 0 0 0.1 dme-miR-79-3p 6mer2-7 AGCTTT 2R 5707062 5707067 - 2R_5707062_5707067_- 0.999999645 0.99986855 0.999934098 9.27E-05 ap FBtr0086058|FBtr0086059 5706200|5706200 5707932|5707932 2R - 5706973 5707099 3'utr ap FlyBase G19687.1 ATATGAATTGCCCGCTGGCAATGTTTTTACCAAGCTTTCACCTTCCGATTAGGTTTGGTGGTCATTTAAGTAAATTCCGATTTAAACTTTGTTTTTAATACGGGAGCGTGTCACTTCCTTTCGGTAT 36 5707050 0.872122181 21 35 325 0.977272727 1.633468456 0.136363636 0.166666667 0.318181818 36 1 0 43 2R:5706973-5707099 6 ap FBtr0086058|FBtr0086059 5706200|5706200 5707932|5707932 AGCTTT 6mer2-7 dme-miR-79-3p 2R - 5707023 5707122 3'utr ap FlyBase G14959.1 GCGGCCAGGTCATGCCCTTCCTCATATGAATTGCCCGCTGGCAATGTTTTTACCAAGCTTTCACCTTCCGATTAGGTTTGGTGGTCATTTAAGTAAATTC 18 5707043 0.743443547 13 18 137 1 1.491361694 0.193548387 0.444444444 0.677419355 18 0 0 31 2R:5707023-5707122 6 11.5 1656 FBgn0000099 2 0.113333333 0.183333333 5.75 101.4705882 62.72727273 -17 -24 -20.5 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 2R 5756100 5756105 + 2R_5756100_5756105_+ 0.999999975 1 0.999999987 0 l(2)09851 FBtr0335269 5755985 5756327 2R + 5755967 5756111 stop_codon l(2)09851 FlyBase G13126.1 TTCGCACGATCAGTGTCTGACCTCGCTATTATTCTGTTTCTTAACGTTAAAAAAATTAAACCGATCTTGTGTCTTTGGGTTTTAAGAATTTTTTACTGGACTTATTTAAACACAAAAAGAAAGTGGAACACTATTGACTTTTATG 41 5756107 0.792305763 16 39 366 0.958333333 1.662757832 0.166666667 0.170731707 0.291666667 41 2 0 46 2R:5755967-5756111 6 l(2)09851 FBtr0335269 5755985 5756327 TTGACT 6mer3-8 dme-miR-1012-3p 2R + 5756083 5756111 3'utr l(2)09851 FlyBase G10039.1 AAGAAAGTGGAACACTATTGACTTTTATG 10 5756107 0.561431005 2 10 73 1 1.176091259 0.466666667 0.3 0.533333333 10 0 0 15 2R:5756083-5756111 6 10 1657 FBgn0022288 410.3333333 32.80666667 50.73333333 0.024370431 0.304816094 0.197109067 -7 -7 -7 0.1 dme-miR-14-3p 7mer-m8 AAGACTG 2R 5772217 5772223 + 2R_5772217_5772223_+ 0.671795832 0.671795832 0.671795832 0 Gp210 FBtr0086044|FBtr0335270 5772199|5772199 5772492|5774324 2R + 5772194 5772238 stop_codon Gp210 FlyBase G13157.1 TAGTTAGTTGGATACGTAAATTAAAGACTGTCAGCAAACTGACTC 89 5772224 0.694120598 5 85 438 0.962264151 2.008600172 0.169811321 0.168539326 0.301886792 89 4 0 102 2R:5772194-5772238 7 Gp210 FBtr0335270|FBtr0086044 5772199|5772199 5774324|5772492 AAGACTG 7mer-m8 dme-miR-14-3p 2R + 5772134 5772242 stop_codon Gp210 FlyBase G10060.1 GTATATTTATGGACACCCTCGTTTGAACTCTTCAAACAGATCAGAAAACTCGACTAGCTTTAGTTAGTTGGATACGTAAATTAAAGACTGTCAGCAAACTGACTCGGGT 84 5772215 0.967086338 14 80 436 0.959016393 1.767155866 0.262295082 0.369047619 0.56557377 84 4 1 117 2R:5772134-5772242 7 80.5 1658 FBgn0266580 2948.146667 58.77 90.26 0.02730529 1.369746469 0.891867937 -7 2 -2.5 0.1 dme-miR-980-3p 6mer2-7 GCAGCT 2R 5772292 5772297 + 2R_5772292_5772297_+ 0.999996741 0.999999755 0.999998248 2.19E-06 Gp210 FBtr0086044|FBtr0335270 5772199|5772199 5772492|5774324 2R + 5772256 5772339 3'utr Gp210 FlyBase G13158.1 ATATAAGATAAACTCAGGCATTTGTAATACTTATATGCAGCTTCTGTCCTTTAAAGTAAATTCTTCTCATCCTGACGCCAGAAA 67 5772297 0.914720795 14 65 580 0.974683544 1.58546073 0.075949367 0.164179104 0.291139241 67 1 1 77 2R:5772256-5772339 6 Gp210 FBtr0335270|FBtr0086044 5772199|5772199 5774324|5772492 GCAGCT 6mer2-7 dme-miR-980-3p 2R + 5772260 5772318 3'utr Gp210 FlyBase G10061.1 AAGATAAACTCAGGCATTTGTAATACTTATATGCAGCTTCTGTCCTTTAAAGTAAATTC 45 5772297 0.896308237 9 43 390 0.971014493 1.826074803 0.130434783 0.355555556 0.579710145 45 2 0 67 2R:5772260-5772318 6 49.5 1659 FBgn0266580 2948.146667 58.77 90.26 0.016790209 0.842266462 0.548415688 -5 -5 -5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2R 5774799 5774805 - 2R_5774799_5774805_- 0.820973082 0.823193379 0.822083231 0.001569989 ZnT41F FBtr0086053|FBtr0086055|FBtr0086056|FBtr0086054 5774774|5774774|5774774|5774774 5774960|5774960|5774960|5774960 2R - 5774788 5774832 3'utr ZnT41F FlyBase G19917.1 TACTGTTAAACATCCAGTGACATTACCCCAAAGAAAATATATTCT 26 5774809 0.779912539 5 25 91 1 1.531478917 0.029411765 0.153846154 0.352941176 26 0 0 34 2R:5774788-5774832 7 ZnT41F FBtr0086056|FBtr0086054|FBtr0086053|FBtr0086055 5774774|5774774|5774774|5774774 5774960|5774960|5774960|5774960 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 5774792 5774825 3'utr ZnT41F FlyBase G15123.1 AAACATCCAGTGACATTACCCCAAAGAAAATATA 12 5774810 0.770891941 5 11 41 0.941176471 1.204119983 0 0.333333333 0.529411765 12 1 0 16 2R:5774792-5774825 7 17.5 1660 FBgn0025693 1109.333333 64.26 98.72666667 0.01577524 0.272331155 0.177257073 4 5 4.5 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 6011784 6011789 + 2R_6011784_6011789_+ 0.999996866 0.99999695 0.999996908 0 Src42A FBtr0335275|FBtr0335276 6011610|6011610 6012500|6012795 2R + 6011767 6011874 3'utr Src42A FlyBase G13169.1 CCGTTTGGTGCCCGTTGGCTGTGGTTGTCTAGGTACCGATACGATTCATGTTATTAGCATTTAAGGTAAATAGTTGCTGAGGTGGAATGCAATTTCAAATGACGTTCC 221 6011782 0.831153906 18 217 1827 0.985663082 1.962211439 0.508960573 0.20361991 0.369175627 221 2 2 275 2R:6011767-6011874 6 Src42A FBtr0335275|FBtr0335276 6011610|6011610 6012500|6012795 GCTGTG 6mer2-7 dme-miR-1008-3p 2R + 6011766 6011808 3'utr Src42A FlyBase G10068.1 CCCGTTTGGTGCCCGTTGGCTGTGGTTGTCTAGGTACCGATAC 145 6011782 0.824277264 7 143 1173 0.991416309 2.36361198 0.467811159 0.420689655 0.639484979 145 2 0 231 2R:6011766-6011808 6 176 1661 FBgn0264959 2196.93 83.74333333 128.84 0.080111792 2.101659834 1.366035393 2 2 2 0.1 dme-miR-965-3p 7mer-m8 TACGCTT 2R 6011934 6011940 + 2R_6011934_6011940_+ 0.619443083 0.610773301 0.615108192 0.006130474 Src42A FBtr0335275|FBtr0335276 6011610|6011610 6012500|6012795 2R + 6011893 6011961 3'utr Src42A FlyBase G13170.1 TTGTTTATTATGACAAACATATTGGCACTTGGTCGGATTTATACGCTTTGACATCCTTGTCGTATATTT 22 6011933 0.98826728 12 21 194 0.96 1.380211242 0.2 0.090909091 0.2 22 1 0 24 2R:6011893-6011961 7 Src42A FBtr0335275|FBtr0335276 6011610|6011610 6012500|6012795 TACGCTT 7mer-m8 dme-miR-965-3p 2R + 6011902 6011956 3'utr Src42A FlyBase G10070.1 ATGACAAACATATTGGCACTTGGTCGGATTTATACGCTTTGACATCCTTGTCGTA 20 6011941 0.679819241 6 18 170 0.944444444 1.531478917 0.083333333 0.5 0.722222222 20 2 0 34 2R:6011902-6011956 7 15.5 1662 FBgn0264959 2196.93 83.74333333 128.84 0.0070553 0.18508936 0.120304253 1 -7 -3 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 6020435 6020441 - 2R_6020435_6020441_- 0.661455018 0.661457933 0.661456476 2.05E-06 Strica FBtr0335289 6020309 6021344 2R - 6020362 6020466 3'utr Strica FlyBase G19970.1 TTATCAGGATCACTAGCCGAGTCGATCTAGTCTTTTTAATTGTCTTGCCTTTTTTCATCTATATATGTAAATCTTGAAAAATCGTCCCAGCAATTGTGACCAATA 33 6020434 0.986366973 10 33 289 1 1.602059991 0.05 0.151515152 0.3 33 0 0 40 2R:6020362-6020466 7 Strica FBtr0335289 6020309 6021344 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R - 6020426 6020453 3'utr Strica FlyBase G15165.1 TAGCCGAGTCGATCTAGTCTTTTTAATT 9 6020434 0.635192538 3 7 74 0.818181818 0.954242509 0.090909091 0.222222222 0.363636364 9 2 0 9 2R:6020426-6020453 7 19 1663 FBgn0033051 1511.393333 79.10666667 121.57 0.012571182 0.240182033 0.156288558 -7 -7 -7 0.1 dme-miR-282-5p 7mer-A1 GAGGCTA 2R 6021100 6021106 - 2R_6021100_6021106_- 0.820574027 0.821220742 0.820897384 0.000457286 Strica FBtr0335289|FBtr0086028 6020309|6020866 6021344|6021344 2R - 6021063 6021130 3'utr Strica FlyBase G19973.1 AAACTAAAGAGGCGGTAAAAGTGTGAGGCTAAATATTAAAAAAAAATTAGTCTGGGGTCGGAATTGTT 19 6021107 0.955825423 4 19 93 1 1.380211242 0.208333333 0.263157895 0.416666667 19 0 0 24 2R:6021063-6021130 7 Strica FBtr0335289|FBtr0086028 6020309|6020866 6021344|6021344 GAGGCTA 7mer-A1 dme-miR-282-5p 2R - 6021066 6021122 3'utr Strica FlyBase G15167.1 GAGGCGGTAAAAGTGTGAGGCTAAATATTAAAAAAAAATTAGTCTGGGGTCGGAATT 22 6021107 0.824764868 3 21 94 1 1.51851394 0.242424242 0.380952381 0.606060606 21 0 0 33 2R:6021066-6021122 7 12.5 1664 FBgn0033051 1511.393333 79.10666667 121.57 0.008270514 0.158014495 0.10282142 1 1 1 0.1 dme-miR-965-3p 8mer-A1 TACGCTTA 2R 6026298 6026305 - 2R_6026298_6026305_- 0.62536488 0.625364918 0.625364899 0 SCAP FBtr0086027 6026271 6026669 2R - 6026282 6026383 3'utr SCAP FlyBase G19985.1 ACATAGTGTCTTAAAGCGCCTCAGCCTAATATAAAATGACTAAATGTTAAAATAAATACATTATTTATTAGAATCACCTACGCTTAATATTCAGAAAGAATA 54 6026305 0.868138262 9 51 371 0.950819672 1.286306739 0.131147541 0.12962963 0.229508197 54 1 2 58 2R:6026282-6026383 8 SCAP FBtr0086027 6026271 6026669 TACGCTTA 8mer-A1 dme-miR-965-3p 2R - 6026283 6026322 3'utr SCAP FlyBase G15175.1 TATTTATTAGAATCACCTACGCTTAATATTCAGAAAGAAT 18 6026305 0.854438311 3 18 131 1 1.414973348 0.153846154 0.444444444 0.615384615 18 0 0 26 2R:6026283-6026322 8 27.5 1665 FBgn0033052 1236.103333 29.14666667 44.57333333 0.022247331 0.943504117 0.616960814 0 0 0 0.1 dme-miR-965-3p 6mer3-8 TACGCT 2R 6026455 6026460 - 2R_6026455_6026460_- 0.999945037 0.678162159 0.839053598 0.2275348 SCAP FBtr0086027 6026271 6026669 2R - 6026437 6026562 3'utr SCAP FlyBase G19986.1 TATACACTATTAGGGTCCGCAGCAACTTACGGTTTTAACACAAGCTGTACGTATCTCATCTCTAGAATTTTGTGTTAGTTTGTGGACACTAAGTGTAACAGCTACGCTCCGGTAGGTTAAGGAACT 51 6026460 0.926251058 18 47 345 0.93220339 1.740362689 0.152542373 0.156862745 0.271186441 51 4 0 55 2R:6026437-6026562 6 SCAP FBtr0086027 6026271 6026669 TACGCT 6mer3-8 dme-miR-965-3p 2R - 6026438 6026567 3'utr SCAP FlyBase G15177.1 AAATATATACACTATTAGGGTCCGCAGCAACTTACGGTTTTAACACAAGCTGTACGTATCTCATCTCTAGAATTTTGTGTTAGTTTGTGGACACTAAGTGTAACAGCTACGCTCCGGTAGGTTAAGGAAC 36 6026484 0.908871633 18 34 279 0.923076923 1.681241237 0.096153846 0.361111111 0.557692308 36 4 0 48 2R:6026438-6026567 6 12.5 1666 FBgn0033052 1236.103333 29.14666667 44.57333333 0.010112423 0.428865508 0.280436733 0 24 12 0.1 dme-miR-283-5p 6mer3-8 TGATAT 2R 6081191 6081196 - 2R_6081191_6081196_- 0.999606647 0.999820521 0.999713584 0.00015125 Ars2 FBtr0086020|FBtr0086021|FBtr0086018 6080826|6081126|6080826 6081333|6081333|6081333 2R - 6081180 6081223 3'utr Ars2 FlyBase G20013.1 ATATAAAGATGGTTTATATACGACTAATGATATCTGTTTTCCTG 40 6081196 0.840562396 2 40 324 1 1.69019608 0.326530612 0.175 0.326530612 40 0 0 49 2R:6081180-6081223 6 Ars2 FBtr0086020|FBtr0086021|FBtr0086018 6080826|6081126|6080826 6081333|6081333|6081333 TGATAT 6mer3-8 dme-miR-283-5p 2R - 6081151 6081224 3'utr Ars2 FlyBase G15189.1 CATATAAAGATGGTTTATATACGACTAATGATATCTGTTTTCCTGTACAATGCTAGAACCTACCTTTATTGCCC 35 6081196 0.987058315 5 33 288 0.946428571 1.423245874 0.410714286 0.371428571 0.607142857 35 2 1 53 2R:6081151-6081224 6 36 1667 FBgn0033062 1878.093333 71.69666667 110.3966667 0.019168376 0.502115394 0.326096802 0 0 0 0.1 dme-miR-305-3p 7mer-A1 TGTGCCA 2R 6082223 6082229 - 2R_6082223_6082229_- 0.457993069 0.560212226 0.509102647 0.072279819 Ars2 FBtr0310666 6080826 6084356 2R - 6082151 6082245 5'utr Ars2 FlyBase G20016.1 AGTTTCTTACTAAGACTGTGCCACTGAGTGACGAAGAGATTAAGAATCTTGGAGCCAAGGACGCCGAAACGGAGGTGGAAAAGTTTGTGCAAGCG 23 6082227 0.971078171 9 20 127 0.884615385 1.06069784 0.153846154 0.130434783 0.230769231 23 2 1 23 2R:6082151-6082245 7 Ars2 FBtr0310666 6080826 6084356 TGTGCCA 7mer-A1 dme-miR-305-3p 2R - 6082189 6082245 5'utr Ars2 FlyBase G15192.1 AGTTTCTTACTAAGACTGTGCCACTGAGTGACGAAGAGATTAAGAATCTTGGAGCCA 10 6082227 0.9801368 4 9 67 0.9375 1.176091259 0.125 0.5 0.6875 10 1 0 15 2R:6082189-6082245 7 11.5 1668 FBgn0033062 1878.093333 71.69666667 110.3966667 0.006123231 0.160397973 0.104169812 -2 -2 -2 0.1 dme-miR-1003-3p 6mer2-7 TGTGAG 2R 6082370 6082375 - 2R_6082370_6082375_- 0.998315659 0.999186688 0.998751173 0.00061589 Ars2 FBtr0310666 6080826 6084356 2R - 6082356 6082403 5'utr Ars2 FlyBase G20017.1 AGTGCACTCAGTAGACTATTACAACCATTGTGAGTATCCATATGAAGA 16 6082376 0.709641842 5 15 104 0.95 0.977723605 0.2 0.1875 0.35 16 0 1 19 2R:6082356-6082403 6 Ars2 FBtr0310666 6080826 6084356 TGTGAG 6mer2-7 dme-miR-1003-3p 2R - 6082352 6082410 5'utr Ars2 FlyBase G15193.1 TGCGTATAGTGCACTCAGTAGACTATTACAACCATTGTGAGTATCCATATGAAGACGAG 15 6082385 0.91753155 7 12 87 0.913043478 1.021189299 0.086956522 0.5 0.695652174 14 1 1 21 2R:6082352-6082410 6 9 1669 FBgn0033062 1878.093333 71.69666667 110.3966667 0.004792094 0.125528848 0.081524201 1 10 5.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 6082803 6082808 - 2R_6082803_6082808_- 0.998296471 0.997941484 0.998118978 0.000251023 Ars2 FBtr0310666|FBtr0310666|FBtr0310666 6080826|6080826|6080826 6084356|6084356|6084356 2R - 6082769 6082841 5'utr Ars2 FlyBase G20019.1 TTGCTGGGGTCTAAACAATCAGCGACTGAGAGACTGTGAAATGGGAGCTATCGTCAATCGGGACCTCAGCCGA 35 6082805 0.78144351 9 34 121 0.956521739 1.643452676 0.173913043 0.228571429 0.413043478 35 2 0 44 2R:6082769-6082841 6 Ars2 FBtr0310666|FBtr0310666|FBtr0310666 6080826|6080826|6080826 6084356|6084356|6084356 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 6082784 6082829 5'utr Ars2 FlyBase G15196.1 AAACAATCAGCGACTGAGAGACTGTGAAATGGGAGCTATCGTCAAT 21 6082804 0.780265715 4 20 66 1 1.579783597 0.368421053 0.55 0.763157895 20 0 0 38 2R:6082784-6082829 6 23 1670 FBgn0033062 1878.093333 71.69666667 110.3966667 0.012246463 0.320795946 0.208339624 -3 -4 -3.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 2R 6083058 6083063 - 2R_6083058_6083063_- 0.999863823 0.999907127 0.999885475 3.06E-05 Ars2 FBtr0310666 6080826 6084356 2R - 6083042 6083100 5'utr Ars2 FlyBase G20021.1 CTGTTGGTAAAGACAAGGTTGTCGAAACCGAGACTATTGATCTAGACAAAGTAAAGGAT 43 6083064 0.68885767 3 41 211 0.98 1.69019608 0.24 0.162790698 0.28 43 1 0 49 2R:6083042-6083100 6 Ars2 FBtr0310666 6080826 6084356 TGATCT 6mer3-8 dme-bantam-3p 2R - 6083048 6083111 5'utr Ars2 FlyBase G15197.1 AGAGAAGCCCTCTGTTGGTAAAGACAAGGTTGTCGAAACCGAGACTATTGATCTAGACAAAGTA 31 6083064 0.953905906 3 30 140 1 1.69019608 0.326530612 0.419354839 0.632653061 31 0 0 49 2R:6083048-6083111 6 34.5 1671 FBgn0033062 1878.093333 71.69666667 110.3966667 0.018369694 0.481193919 0.312509436 1 1 1 0.1 dme-miR-92b-3p 8mer-m1 GTGCAATT 2R 6091023 6091030 - 2R_6091023_6091030_- 0.596697688 0.596686526 0.596692107 7.92E-06 EcR FBtr0302439|FBtr0086008|FBtr0086010|FBtr0086012 6087871|6090417|6090417|6090417 6092587|6092587|6092587|6092587 2R - 6091010 6091045 3'utr EcR FlyBase G20035.1 CTTTCTACTTGAATTGTGCAATTTTTTACTTTTACT 14 6091032 0.732402923 6 14 147 1 1.230448921 0 0.214285714 0.352941176 14 0 0 17 2R:6091010-6091045 8 EcR FBtr0086012|FBtr0086008|FBtr0086010|FBtr0302439 6090417|6090417|6090417|6087871 6092587|6092587|6092587|6092587 GTGCAATT 8mer-m1 dme-miR-92b-3p 2R - 6090996 6091041 3'utr EcR FlyBase G15202.2 CTACTTGAATTGTGCAATTTTTTACTTTTACTACTAATCCTAATTT 11 6091032 0.928711765 4 8 120 0.875 0.669006781 0.0625 0.363636364 0.5625 11 0 2 14 2R:6090996-6091041 8 10.5 1672 FBgn0000546 917.5266667 23.27333333 35.89 0.011443809 0.451160126 0.292560602 2 2 2 0.1 dme-miR-965-3p 6mer3-8 TACGCT 2R 6092335 6092340 - 2R_6092335_6092340_- 0.985120663 0.999013201 0.992066932 0.009823481 EcR FBtr0302439|FBtr0086009|FBtr0086008|FBtr0086010|FBtr0086011|FBtr0086012 6087871|6091864|6090417|6090417|6092275|6090417 6092587|6092587|6092587|6092587|6092587|6092587 2R - 6092228 6092451 5'utr-coding EcR FlyBase G20041.2 TAAAAAGTGAATAATTAATGGACAAGCGTAAAATGCAGTTATTTAGTCTTAAGCCTGCAAATATTACCTATTATTCATACAAATTAACATATAATACAGCCTATTAACAATTACGCTAAAGCTTAATTGAAAAAGCTTCAACAACAATTGGACAAACGCGTTGAGGAACCGGGAGAAAATTTAAGAAAAAAAAAACCATTGAAAATTATGAAATTTAGTATACA 63 6092341 0.979374601 26 54 375 0.896103896 1.838849091 0.103896104 0.206349206 0.350649351 63 8 0 69 2R:6092228-6092451 6 EcR FBtr0086011|FBtr0086012|FBtr0086008|FBtr0086010|FBtr0302439|FBtr0086009 6092275|6090417|6090417|6090417|6087871|6091864 6092587|6092587|6092587|6092587|6092587|6092587 TACGCT 6mer3-8 dme-miR-965-3p 2R - 6092328 6092441 5'utr EcR FlyBase G15207.1 ATAATTAATGGACAAGCGTAAAATGCAGTTATTTAGTCTTAAGCCTGCAAATATTACCTATTATTCATACAAATTAACATATAATACAGCCTATTAACAATTACGCTAAAGCTT 25 6092341 0.977033311 12 25 182 1 1.591064607 0.051282051 0.44 0.641025641 25 0 0 39 2R:6092328-6092441 6 8.5 1673 FBgn0000546 917.5266667 23.27333333 35.89 0.009264036 0.365224864 0.236834773 1 1 1 0.1 dme-miR-33-5p 6mer2-7 AATGCA 2R 6092415 6092420 - 2R_6092415_6092420_- 0.902460991 1 0.951230495 0.068970488 EcR FBtr0302439|FBtr0086009|FBtr0086008|FBtr0086010|FBtr0086011|FBtr0086012 6087871|6091864|6090417|6090417|6092275|6090417 6092587|6092587|6092587|6092587|6092587|6092587 2R - 6092228 6092451 5'utr-coding EcR FlyBase G20041.2 TAAAAAGTGAATAATTAATGGACAAGCGTAAAATGCAGTTATTTAGTCTTAAGCCTGCAAATATTACCTATTATTCATACAAATTAACATATAATACAGCCTATTAACAATTACGCTAAAGCTTAATTGAAAAAGCTTCAACAACAATTGGACAAACGCGTTGAGGAACCGGGAGAAAATTTAAGAAAAAAAAAACCATTGAAAATTATGAAATTTAGTATACA 63 6092411 0.979374601 26 54 375 0.896103896 1.838849091 0.103896104 0.206349206 0.350649351 63 8 0 69 2R:6092228-6092451 6 EcR FBtr0086011|FBtr0086012|FBtr0086008|FBtr0086010|FBtr0302439|FBtr0086009 6092275|6090417|6090417|6090417|6087871|6091864 6092587|6092587|6092587|6092587|6092587|6092587 AATGCA 6mer2-7 dme-miR-33-5p 2R - 6092328 6092441 5'utr EcR FlyBase G15207.1 ATAATTAATGGACAAGCGTAAAATGCAGTTATTTAGTCTTAAGCCTGCAAATATTACCTATTATTCATACAAATTAACATATAATACAGCCTATTAACAATTACGCTAAAGCTT 25 6092412 0.977033311 12 25 182 1 1.591064607 0.051282051 0.44 0.641025641 25 0 0 39 2R:6092328-6092441 6 15 1674 FBgn0000546 917.5266667 23.27333333 35.89 0.016348299 0.644514466 0.417943717 -9 -8 -8.5 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 2R 6209910 6209915 - 2R_6209910_6209915_- 0.999999989 0.999993144 0.999996567 4.88E-06 l(2)k14710 FBtr0305967|FBtr0086000 6209780|6209780 6210093|6210093 2R - 6209885 6209930 3'utr l(2)k14710 FlyBase G20069.1 GAGCTTGGCTGTATTATGTGAATGAACCATTCTGCTATCTTCCTTA 21 6209908 0.867402234 7 18 156 0.88 1.041392685 0.52 0.19047619 0.32 21 2 1 22 2R:6209885-6209930 6 l(2)k14710 FBtr0086000|FBtr0305967 6209780|6209780 6210093|6210093 ATGTGA 6mer3-8 dme-miR-1003-3p 2R - 6209882 6209930 3'utr l(2)k14710 FlyBase G15222.1 GAGCTTGGCTGTATTATGTGAATGAACCATTCTGCTATCTTCCTTAATC 19 6209925 0.740576723 5 19 158 1 1.361727836 0.217391304 0.210526316 0.347826087 19 0 0 23 2R:6209882-6209930 6 17 1675 FBgn0021847 147.6666667 5.836666667 8.94 0.115124153 2.912621359 1.901565996 -7 10 1.5 0.1 dme-miR-970-3p 7mer-A1 CTTATGA 2R 6239889 6239895 + 2R_6239889_6239895_+ 0.815526763 0.819183092 0.817354927 0.002585395 bin3 FBtr0346718|FBtr0085993 6239761|6239761 6240602|6240602 2R + 6239826 6239921 3'utr bin3 FlyBase G13229.1 CTTAAAAAAAACCCCAAAAAGTTTTCGTAAAGAAAAAATTTAATGCAACCGTAAACGGAGACGCTTATGATTTTCTATGGTATAATGTGCGTATAT 124 6239893 0.965031683 12 118 619 0.947368421 2.158362492 0.118421053 0.153225806 0.309210526 124 8 0 144 2R:6239826-6239921 7 bin3 FBtr0346718|FBtr0085993 6239761|6239761 6240602|6240602 CTTATGA 7mer-A1 dme-miR-970-3p 2R + 6239829 6239913 3'utr bin3 FlyBase G10110.1 AAAAAAAACCCCAAAAAGTTTTCGTAAAGAAAAAATTTAATGCAACCGTAAACGGAGACGCTTATGATTTTCTATGGTATAATGT 95 6239893 0.966798336 10 91 489 0.964285714 1.829303773 0.071428571 0.315789474 0.535714286 95 4 1 135 2R:6239829-6239913 7 71 1676 FBgn0263144 2119.726667 46.07 71.03666667 0.033494885 1.541133058 0.999483835 -4 -4 -4 0.1 dme-miR-305-5p 6mer3-8 AGTACA 2R 6255095 6255100 + 2R_6255095_6255100_+ 0.594641629 0.906642792 0.75064221 0.220618164 Pld FBtr0085997|FBtr0336520|FBtr0085996|FBtr0114492|FBtr0085999|FBtr0085995 6254945|6254945|6254945|6254945|6254945|6254945 6255266|6255266|6255266|6255266|6255266|6255266 2R + 6255094 6255131 3'utr Pld FlyBase G13241.1 AAGTACATGTAGCTATTCCTTACCAATAGTTAATTTAT 8 6255109 0.704824489 3 7 76 0.9 0.954242509 0 0.25 0.4 8 1 0 9 2R:6255094-6255131 6 Pld FBtr0085999|FBtr0085995|FBtr0085996|FBtr0114492|FBtr0085997|FBtr0336520 6254945|6254945|6254945|6254945|6254945|6254945 6255266|6255266|6255266|6255266|6255266|6255266 AGTACA 6mer3-8 dme-miR-305-5p 2R + 6255047 6255133 3'utr Pld FlyBase G10118.1 ATTTTGTAAATAGTGTATAATAGCCGTAGATAACTCTAGATACTTTCAAGTACATGTAGCTATTCCTTACCAATAGTTAATTTATTT 12 6255109 0.727780705 7 12 118 1 1.176091259 0.066666667 0.25 0.4 12 0 0 15 2R:6255047-6255133 6 7.5 1677 FBgn0033075 660.35 16.28666667 25.06 0.011357613 0.460499386 0.299281724 -14 -14 -14 0.1 dme-miR-8-3p 7mer-m8 CAGTATT 2R 6255199 6255205 + 2R_6255199_6255205_+ 0.650617193 0.637780724 0.644198959 0.009076776 Pld FBtr0085997|FBtr0336520|FBtr0085996|FBtr0114492|FBtr0085999|FBtr0085995 6254945|6254945|6254945|6254945|6254945|6254945 6255266|6255266|6255266|6255266|6255266|6255266 2R + 6255182 6255247 3'utr Pld FlyBase G13242.2 TTTTGTATGATGTTAAACAGTATTTTAGACCGATTTACACAAGTTTATTAAAGTGATATGAAGTGC 34 6255206 0.805003993 9 29 247 0.930232558 1.301029996 0.162790698 0.176470588 0.348837209 34 2 1 40 2R:6255182-6255247 7 Pld FBtr0085999|FBtr0085995|FBtr0085996|FBtr0114492|FBtr0085997|FBtr0336520 6254945|6254945|6254945|6254945|6254945|6254945 6255266|6255266|6255266|6255266|6255266|6255266 CAGTATT 7mer-m8 dme-miR-8-3p 2R + 6255189 6255255 3'utr Pld FlyBase G10119.1 TGATGTTAAACAGTATTTTAGACCGATTTACACAAGTTTATTAAAGTGATATGAAGTGCAAATGAAG 38 6255206 0.718122199 11 33 260 0.901960784 1.361727836 0.215686275 0.263157895 0.450980392 38 4 1 46 2R:6255189-6255255 7 23 1678 FBgn0033075 660.35 16.28666667 25.06 0.034830014 1.412198117 0.917797287 -7 -7 -7 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 6626425 6626431 - 2R_6626425_6626431_- 0.791294568 0.791386414 0.791340491 6.49E-05 Vha16-1 FBtr0086152|FBtr0086152|FBtr0086152|FBtr0086150|FBtr0086150|FBtr0086150|FBtr0086153|FBtr0086153|FBtr0086153|FBtr0086151|FBtr0086151|FBtr0086151 6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240 6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469 2R - 6626359 6626544 3'utr Vha16-1 FlyBase G20121.3 ACACACATACAAAATGTAACTAAGTCCTACGTTTATTTTTAATTATTGTTCAATTCTAAGAATAATATATTAAAAATTAATAATAATAAATTATATATATAATTATGATTTTTTGTGATAAGAACAGATGGTAATGCAAACAATTACGGTATTGATATACATAATATATACAGAATATATATATAT 408 6626433 0.77285983 31 378 3488 0.928131417 1.509010399 0.223819302 0.159313725 0.295687885 408 22 13 452 2R:6626359-6626544 7 Vha16-1 FBtr0086151|FBtr0086151|FBtr0086151|FBtr0086153|FBtr0086153|FBtr0086153|FBtr0086150|FBtr0086150|FBtr0086150|FBtr0086152|FBtr0086152|FBtr0086152 6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240 6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 6626357 6626457 3'utr Vha16-1 FlyBase G15273.1 AAATTATATATATAATTATGATTTTTTGTGATAAGAACAGATGGTAATGCAAACAATTACGGTATTGATATACATAATATATACAGAATATATATATATAT 263 6626433 0.710250446 20 237 2224 0.92 1.423875743 0.245333333 0.30418251 0.512 263 18 12 345 2R:6626357-6626457 7 283 1679 FBgn0262736 36576.97333 1582.373333 2438.476667 0.007737108 0.178845279 0.116056062 2 2 2 0.1 dme-miR-277-3p 6mer3-8 TGCATT 2R 6626860 6626865 - 2R_6626860_6626865_- 0.999727242 0.999757539 0.99974239 2.14E-05 Vha16-1 FBtr0086152|FBtr0086150|FBtr0086153|FBtr0086151 6625240|6625240|6625240|6625240 6627469|6627469|6627469|6627469 2R - 6626803 6626934 3'utr Vha16-1 FlyBase G20123.1 CGTTAAACAAAAAGAAAAAATTGTAAAGAAATCAACAACCAACAATTGTCAGAAGAAACTTTGTACATTTGCATTGAGCCTGACGCGGCTGCAACCAATTCAGATCAACAAATTTAGCGAAAGGGCCAAAAC 722 6626860 0.968736552 19 714 4007 0.990453461 2.919078092 0.054892601 0.13434903 0.254176611 722 8 0 830 2R:6626803-6626934 6 Vha16-1 FBtr0086151|FBtr0086153|FBtr0086150|FBtr0086152 6625240|6625240|6625240|6625240 6627469|6627469|6627469|6627469 TGCATT 6mer3-8 dme-miR-277-3p 2R - 6626803 6626984 3'utr Vha16-1 FlyBase G15274.1 TGTTTTTTCCATTATTATTATTAAATAATGTTTAGTGTATATGTAAAGTTCGTTAAACAAAAAGAAAAAATTGTAAAGAAATCAACAACCAACAATTGTCAGAAGAAACTTTGTACATTTGCATTGAGCCTGACGCGGCTGCAACCAATTCAGATCAACAAATTTAGCGAAAGGGCCAAAAC 342 6626860 0.971976736 17 331 1876 0.965073529 2.243038049 0.051470588 0.394736842 0.619485294 342 17 2 525 2R:6626803-6626984 6 505.5 1680 FBgn0262736 36576.97333 1582.373333 2438.476667 0.01382017 0.31945685 0.207301553 -5 -5 -5 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA 2R 6627288 6627293 - 2R_6627288_6627293_- 0.999995103 0.999999337 0.99999722 2.97E-06 Vha16-1 FBtr0086152|FBtr0086150|FBtr0086153|FBtr0086151 6625240|6625240|6625240|6625240 6627469|6627469|6627469|6627469 2R - 6627251 6627378 3'utr Vha16-1 FlyBase G20126.1 AGGAGCAGGTAAAATTGTGTCAAGCCAATGAGCAACGTGCAACATGCAACTTCCAACAAGCAAAAACCACAACAGTGCGTGTGCGGTGCAAGCCCGGCGTGGACCGTTTGTACATAGGGAGAACAACC 22 6627292 0.942840953 9 22 90 1 1.397940009 0.16 0.136363636 0.24 22 0 0 25 2R:6627251-6627378 6 Vha16-1 FBtr0086151|FBtr0086153|FBtr0086150|FBtr0086152 6625240|6625240|6625240|6625240 6627469|6627469|6627469|6627469 GTGCAA 6mer3-8 dme-miR-92b-3p 2R - 6627248 6627312 3'utr Vha16-1 FlyBase G15276.1 CCACAACAGTGCGTGTGCGGTGCAAGCCCGGCGTGGACCGTTTGTACATAGGGAGAACAACCAAA 18 6627292 0.945579313 5 17 71 0.888888889 1.380211242 0 0.222222222 0.481481481 18 3 0 24 2R:6627248-6627312 6 14.5 1681 FBgn0262736 36576.97333 1582.373333 2438.476667 0.000396424 0.009163451 0.005946335 -1 -1 -1 0.1 dme-miR-33-5p 8mer-A1 CAATGCAA 2R 6627456 6627463 - 2R_6627456_6627463_- 0.634551902 0.596548174 0.615550038 0.026872674 Vha16-1 FBtr0086152|FBtr0086150|FBtr0086153|FBtr0086151 6625240|6625240|6625240|6625240 6627469|6627469|6627469|6627469 2R - 6627390 6627674 stop_codon Vha16-1 FlyBase G20127.1 GGGCTTCATTCACTTGGGAGCCGGTCTGGCGGTGGGCTTCTCTGGTCTGGCAGCTGGTTTTGCGATCGGCATCGTGGGAGACGCCGGTGTCCGTGGCACAGCACAGCAGCCTAGACTGTTCGTGGGCATGATCCTGATTCTCATCTTCGCCGAAGTGTTGGGTCTCTACGGCTTGATTGTGGCCATTTACCTGTACACGAAATAAATCAATCAATGCAAACACACAACAACAACAGATAGACAAACGGCGCCCAGCGGTCAACAGCAGCCACATCAACATCAGCA 527 6627437 0.991841914 45 505 2120 0.957307061 2.163608563 0.174055829 0.138519924 0.254515599 527 23 3 583 2R:6627390-6627674 8 Vha16-1 FBtr0086151|FBtr0086153|FBtr0086150|FBtr0086152 6625240|6625240|6625240|6625240 6627469|6627469|6627469|6627469 CAATGCAA 8mer-A1 dme-miR-33-5p 2R - 6627409 6627659 stop_codon Vha16-1 FlyBase G15277.1 GGGAGCCGGTCTGGCGGTGGGCTTCTCTGGTCTGGCAGCTGGTTTTGCGATCGGCATCGTGGGAGACGCCGGTGTCCGTGGCACAGCACAGCAGCCTAGACTGTTCGTGGGCATGATCCTGATTCTCATCTTCGCCGAAGTGTTGGGTCTCTACGGCTTGATTGTGGCCATTTACCTGTACACGAAATAAATCAATCAATGCAAACACACAACAACAACAGATAGACAAACGGCGCCCAGCGGTCAACAGC 219 6627437 0.980735945 35 202 868 0.917127072 1.566895574 0.20718232 0.442922374 0.662983425 219 22 8 332 2R:6627409-6627659 8 105.5 1682 FBgn0262736 36576.97333 1582.373333 2438.476667 0.002884328 0.066672003 0.043264716 -26 -26 -26 0.1 dme-miR-932-5p 6mer2-7 GAATTG 2R 6642446 6642451 - 2R_6642446_6642451_- 0.999998389 0.994753051 0.99737572 0.003708987 Fmo-2 FBtr0086148 6642416 6642703 2R - 6642433 6642507 3'utr Fmo-2 FlyBase G20142.1 TAACCAGGAGTATATCTGATAATGTCCACCATAGCTCTTTAATTCTAAGCCTCGTAGAATTGTAGAAGTCAAATT 22 6642469 0.777786995 8 21 154 0.965517241 1.447158031 0.068965517 0.227272727 0.413793103 22 1 0 28 2R:6642433-6642507 6 Fmo-2 FBtr0086148 6642416 6642703 GAATTG 6mer2-7 dme-miR-932-5p 2R - 6642431 6642485 3'utr Fmo-2 FlyBase G15285.1 TGTCCACCATAGCTCTTTAATTCTAAGCCTCGTAGAATTGTAGAAGTCAAATTAA 19 6642448 0.765529089 5 17 137 0.90625 1.462397998 0.03125 0.526315789 0.71875 19 3 0 29 2R:6642431-6642485 6 13.5 1683 FBgn0033079 393.3166667 28.71 43.87 0.034323488 0.470219436 0.307727376 18 -3 7.5 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 2R 6642578 6642583 - 2R_6642578_6642583_- 0.999999875 1 0.999999937 7.07E-08 Fmo-2 FBtr0086148 6642416 6642703 2R - 6642543 6642600 3'utr Fmo-2 FlyBase G20143.1 ACGGATTATAACTCAGATGTGTTAATTAATATTTTATAAGAACAATGTAAATCAAAGT 16 6642574 0.98556447 10 15 149 0.944444444 1.230448921 0.277777778 0.125 0.222222222 16 1 0 17 2R:6642543-6642600 6 Fmo-2 FBtr0086148 6642416 6642703 TGTGTT 6mer3-8 dme-miR-317-3p 2R - 6642517 6642599 3'utr Fmo-2 FlyBase G15286.1 CGGATTATAACTCAGATGTGTTAATTAATATTTTATAAGAACAATGTAAATCAAAGTATGTTTTGAACGATTAATTCAAAACG 14 6642575 0.990922515 8 13 135 0.952380952 1.301029996 0.238095238 0.357142857 0.571428571 14 1 0 20 2R:6642517-6642599 6 13 1684 FBgn0033079 393.3166667 28.71 43.87 0.033052248 0.452803901 0.296330066 -9 -8 -8.5 0.1 dme-miR-965-3p 7mer-m8 TACGCTT 2R 6660474 6660480 + 2R_6660474_6660480_+ 0.619701633 0.619053116 0.619377375 0.000458559 sced FBtr0086110 6659979 6660624 2R + 6660456 6660505 3'utr sced FlyBase G13330.1 TGGCGGCGTAGCCTGAACTACGCTTTTCGGCTTCGCATAACATATCAGAG 44 6660481 0.955604803 4 42 300 0.97826087 1.352182518 0.347826087 0.022727273 0.065217391 44 0 1 45 2R:6660456-6660505 7 sced FBtr0086110 6659979 6660624 TACGCTT 7mer-m8 dme-miR-965-3p 2R + 6660456 6660495 3'utr sced FlyBase G10181.1 TGGCGGCGTAGCCTGAACTACGCTTTTCGGCTTCGCATAA 21 6660481 0.669762867 3 20 134 1 1.491361694 0.193548387 0.428571429 0.612903226 21 0 0 31 2R:6660456-6660495 7 31.5 1685 FBgn0013732 116.0133333 4.383333333 6.713333333 0.271520515 7.186311787 4.692154916 -7 -7 -7 0.1 dme-miR-2535b-3p 6mer3-8 CCGTGA 2R 6660562 6660567 + 2R_6660562_6660567_+ 0.996318316 0.997834849 0.997076583 0.001072327 sced FBtr0086110 6659979 6660624 2R + 6660534 6660581 3'utr sced FlyBase G13331.1 AAGATAGCATAACCAATGCTGAACTGTACCGTGACTAAACCATAAGCT 16 6660558 0.962489818 5 16 84 1 1.255272505 0.055555556 0.0625 0.166666667 16 0 0 18 2R:6660534-6660581 6 sced FBtr0086110 6659979 6660624 CCGTGA 6mer3-8 dme-miR-2535b-3p 2R + 6660538 6660582 3'utr sced FlyBase G10182.1 TAGCATAACCAATGCTGAACTGTACCGTGACTAAACCATAAGCTT 15 6660558 0.892305244 3 15 78 1 1.301029996 0 0.266666667 0.45 15 0 0 20 2R:6660538-6660582 6 15.5 1686 FBgn0013732 116.0133333 4.383333333 6.713333333 0.133605333 3.536121673 2.308838133 4 4 4 0.1 dme-miR-304-5p 6mer3-8 TGAGAT 2R 6667438 6667443 + 2R_6667438_6667443_+ 0.982100751 0.99999999 0.99105037 0.012656646 Adf1 FBtr0086112|FBtr0086113|FBtr0086111 6667376|6667376|6667376 6668085|6668085|6668085 2R + 6667420 6667445 stop_codon Adf1 FlyBase G13338.1 CTGGAGAGCGTTCTGCCCTGAGATCA 10 6667435 0.784926626 2 9 41 0.916666667 0.740362689 0.166666667 0.2 0.333333333 10 0 1 11 2R:6667420-6667445 6 Adf1 FBtr0086112|FBtr0086113|FBtr0086111 6667376|6667376|6667376 6668085|6668085|6668085 TGAGAT 6mer3-8 dme-miR-304-5p 2R + 6667421 6667444 stop_codon Adf1 FlyBase G10186.1 TGGAGAGCGTTCTGCCCTGAGATC 6 6667431 0.575256062 4 6 24 1 0.954242509 0.222222222 0.5 0.666666667 6 0 0 9 2R:6667421-6667444 6 8 1687 FBgn0000054 324.7166667 22.48333333 34.04 0.024636863 0.355819125 0.235017626 3 7 5 0.1 dme-miR-995-5p 6mer3-8 AATTCG 2R 6667666 6667671 + 2R_6667666_6667671_+ 0.999995852 0.999367149 0.9996815 0.000444629 Adf1 FBtr0086112|FBtr0086113|FBtr0086111|FBtr0330252 6667376|6667376|6667376|6667439 6668085|6668085|6668085|6668085 2R + 6667584 6667734 3'utr Adf1 FlyBase G13339.1 TAACGCGTAATGATACTTCCCCACGCCCATGTAGACAAACATATATATTTATATGCTTAGTTGACCCCATGATCGGTGATTTAATTCGCGCCCAGTTCTCAGCTCTGTACAAAAAATGCGATTGAAAATAGCGATTCTAGAATTATGAGTA 77 6667665 0.898760895 22 72 491 0.966292135 1.633468456 0.08988764 0.116883117 0.235955056 77 2 1 86 2R:6667584-6667734 6 Adf1 FBtr0086112|FBtr0086113|FBtr0086111|FBtr0330252 6667376|6667376|6667376|6667439 6668085|6668085|6668085|6668085 AATTCG 6mer3-8 dme-miR-995-5p 2R + 6667593 6667827 3'utr Adf1 FlyBase G10188.1 ATGATACTTCCCCACGCCCATGTAGACAAACATATATATTTATATGCTTAGTTGACCCCATGATCGGTGATTTAATTCGCGCCCAGTTCTCAGCTCTGTACAAAAAATGCGATTGAAAATAGCGATTCTAGAATTATGAGTAGCTTGTTAAAAGACCGTGGAAACACTTTATATGCAGCGTATTGTAAATTTTGACTACGATTTAGTTGTAATTTGCCATCGGGTCTTAGCTCTA 88 6667664 0.799933807 33 82 665 0.943089431 2.064457989 0.162601626 0.295454545 0.495934959 88 7 0 116 2R:6667593-6667827 6 28 1688 FBgn0000054 324.7166667 22.48333333 34.04 0.08622902 1.245366938 0.822561692 1 2 1.5 0.1 dme-miR-1012-3p 7mer-m8 TTGACTA 2R 6667784 6667790 + 2R_6667784_6667790_+ 0.623295345 0.622230081 0.622762713 0.00075321 Adf1 FBtr0086112|FBtr0086113|FBtr0086111|FBtr0330252 6667376|6667376|6667376|6667439 6668085|6668085|6668085|6668085 2R + 6667739 6667789 3'utr Adf1 FlyBase G13339.2 GTTAAAAGACCGTGGAAACACTTTATATGCAGCGTATTGTAAATTTTGACT 49 6667766 0.756989286 9 41 349 0.883333333 1.423245874 0.366666667 0.142857143 0.3 49 6 1 53 2R:6667739-6667789 6 Adf1 FBtr0086112|FBtr0086113|FBtr0086111|FBtr0330252 6667376|6667376|6667376|6667439 6668085|6668085|6668085|6668085 TTGACTA 7mer-m8 dme-miR-1012-3p 2R + 6667593 6667827 3'utr Adf1 FlyBase G10188.1 ATGATACTTCCCCACGCCCATGTAGACAAACATATATATTTATATGCTTAGTTGACCCCATGATCGGTGATTTAATTCGCGCCCAGTTCTCAGCTCTGTACAAAAAATGCGATTGAAAATAGCGATTCTAGAATTATGAGTAGCTTGTTAAAAGACCGTGGAAACACTTTATATGCAGCGTATTGTAAATTTTGACTACGATTTAGTTGTAATTTGCCATCGGGTCTTAGCTCTA 88 6667766 0.799933807 33 82 665 0.943089431 2.064457989 0.162601626 0.295454545 0.495934959 88 7 0 116 2R:6667593-6667827 7 15 1689 FBgn0000054 324.7166667 22.48333333 34.04 0.046194118 0.66716086 0.440658049 18 18 18 0.1 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2R 6669838 6669843 + 2R_6669838_6669843_+ 0.888936449 0.658580182 0.773758315 0.162886431 CG9410 FBtr0330253 6669378 6670076 2R + 6669834 6669900 3'utr CG9410 FlyBase G13345.1 ATTTTTTGACCTTATCTGCGATCAAATGGAAAACGCTTTTATCCAGGAGGTCCGTCGACGGAGTGGT 63 6669848 0.91409507 8 60 402 0.976190476 1.612783857 0.202380952 0.222222222 0.416666667 63 1 1 82 2R:6669834-6669900 6 CG9410 FBtr0330253 6669378 6670076 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2R + 6669834 6669864 3'utr CG9410 FlyBase G10189.1 ATTTTTTGACCTTATCTGCGATCAAATGGAA 38 6669848 0.727444417 2 36 233 0.953125 1.785329835 0.234375 0.447368421 0.671875 38 3 0 61 2R:6669834-6669864 6 46 1690 FBgn0033086 44.95 6.64 10.13666667 1.023359288 6.927710843 4.537980927 -10 -10 -10 0.1 dme-miR-999-3p 6mer2-7 GTTAAC 2R 6670221 6670226 - 2R_6670221_6670226_- 0.996412048 0.996150332 0.99628119 0.00018505 Hsepi FBtr0086145|FBtr0302190 6670152|6670152 6671031|6671031 2R - 6670188 6670257 3'utr Hsepi FlyBase G20162.1 TGTGTCCCACTACTAATCCCAAAACGAGACTGTTAACGAAAATATTTGATTTTGAATATTATGTTAAGTG 145 6670225 0.686670006 9 139 551 0.964705882 1.913813852 0.035294118 0.137931034 0.264705882 145 5 1 164 2R:6670188-6670257 6 Hsepi FBtr0302190|FBtr0086145 6670152|6670152 6671031|6671031 GTTAAC 6mer2-7 dme-miR-999-3p 2R - 6670161 6670258 3'utr Hsepi FlyBase G15301.1 GTGTGTCCCACTACTAATCCCAAAACGAGACTGTTAACGAAAATATTTGATTTTGAATATTATGTTAAGTGAACCAAATTAAAGTACTTAATTTTTGT 127 6670225 0.932323311 9 127 481 1 2.252853031 0.016759777 0.307086614 0.508379888 127 0 0 179 2R:6670161-6670258 6 131 1691 FBgn0033087 180.49 7.23 11.15666667 0.725801983 18.11894882 11.74185838 -1 -1 -1 0.1 dme-miR-184-5p 7mer-m8 TGATAAG 2R 6670437 6670443 - 2R_6670437_6670443_- 0.658989621 0.658999341 0.658994481 6.86E-06 Hsepi FBtr0086145|FBtr0302190 6670152|6670152 6671031|6671031 2R - 6670396 6670503 3'utr Hsepi FlyBase G20165.1 AGCGCTCCCACTCAATACTAACTGCCCAAATAACGATGCACGATAATAACGACTTATATATGATAAGCCTGTAATGTAATGTATTGTAGTGTATGCCACTCGAGAATA 17 6670458 0.971457255 10 16 99 0.947368421 1.255272505 0.263157895 0.117647059 0.210526316 17 1 0 18 2R:6670396-6670503 7 Hsepi FBtr0302190|FBtr0086145 6670152|6670152 6671031|6671031 TGATAAG 7mer-m8 dme-miR-184-5p 2R - 6670415 6670470 3'utr Hsepi FlyBase G15304.1 CGATGCACGATAATAACGACTTATATATGATAAGCCTGTAATGTAATGTATTGTAG 7 6670457 0.971527834 5 7 40 1 0.954242509 0.222222222 0.142857143 0.333333333 7 0 0 9 2R:6670415-6670470 7 6 1692 FBgn0033087 180.49 7.23 11.15666667 0.033242839 0.829875519 0.53779504 15 14 14.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 2R 6670902 6670907 - 2R_6670902_6670907_- 0.999997307 0.999991213 0.99999426 4.31E-06 Hsepi FBtr0086145|FBtr0302190 6670152|6670152 6671031|6671031 2R - 6670891 6670936 3'utr Hsepi FlyBase G20169.2 GCCGTGTCCTTTCCACAACCTCACACTCCTGATCTGGAAATAGTTT 45 6670907 0.75866488 6 40 233 0.910714286 1.008600172 0.035714286 0.222222222 0.375 45 1 4 51 2R:6670891-6670936 6 Hsepi FBtr0302190|FBtr0086145 6670152|6670152 6671031|6671031 TGATCT 6mer3-8 dme-bantam-3p 2R - 6670760 6670940 3'utr Hsepi FlyBase G15307.1 AAACGCCGTGTCCTTTCCACAACCTCACACTCCTGATCTGGAAATAGTTTCGTGTTTCTATTCTGTTATTTCCGCCCACGTATGTGTGCTGAAATCCTTATTAAGCTTGTCTATCTGGGCGCCTAGTGTTAAGCTGTTGTACCTTTACCTTTGATTGCATTATCAGATGTTGGCCTCGTCT 61 6670907 0.987093559 22 55 474 0.91954023 1.124938737 0.068965517 0.344262295 0.540229885 61 2 5 80 2R:6670760-6670940 6 34 1693 FBgn0033087 180.49 7.23 11.15666667 0.188376087 4.702627939 3.047505229 0 0 0 0.1 dme-miR-33-5p 6mer2-7 AATGCA 2R 6695459 6695464 - 2R_6695459_6695464_- 0.999999864 0.99999988 0.999999872 0 Mob4 FBtr0086141|FBtr0307075 6695112|6695112 6695593|6695593 2R - 6695451 6695534 3'utr Mob4 FlyBase G20181.1 ATTTACCAATAGCTTGCAAGTTGGGTTGGCTCACCCTGACAGGGAAACGATTCCACGCGGACCCGACTCTAATGCAGATCTTGT 19 6695463 0.979619965 10 16 110 0.821428571 1.361727836 0.357142857 0.368421053 0.571428571 19 5 0 23 2R:6695451-6695534 6 Mob4 FBtr0086141|FBtr0307075 6695112|6695112 6695593|6695593 AATGCA 6mer2-7 dme-miR-33-5p 2R - 6695448 6695534 3'utr Mob4 FlyBase G15315.1 ATTTACCAATAGCTTGCAAGTTGGGTTGGCTCACCCTGACAGGGAAACGATTCCACGCGGACCCGACTCTAATGCAGATCTTGTATG 11 6695464 0.970090156 7 10 59 0.933333333 0.84509804 0.066666667 0.272727273 0.466666667 11 0 1 14 2R:6695448-6695534 6 6 1694 FBgn0259483 539.6566667 46.58333333 71.19333333 0.01111818 0.128801431 0.084277554 -1 0 -0.5 0.1 dme-miR-1012-3p 7mer-A1 TGACTAA 2R 6698613 6698619 + 2R_6698613_6698619_+ 0.823349441 0.823284724 0.823317083 4.57E-05 Rab2 FBtr0086124|FBtr0336658 6698543|6698543 6699469|6698844 2R + 6698553 6698641 3'utr Rab2 FlyBase G13358.1 CGCAGATGCCCGATTGCAATTCTGGGATAGGCGCAGCCGCTTCTGTAAAAGCTACTTTAGTGACTAACTAATAGAAGGTAGTTGAAGGA 22 6698609 0.966296488 10 21 142 0.961538462 1.397940009 0.307692308 0.136363636 0.269230769 22 1 0 25 2R:6698553-6698641 7 Rab2 FBtr0086124|FBtr0336658 6698543|6698543 6699469|6698844 TGACTAA 7mer-A1 dme-miR-1012-3p 2R + 6698559 6698638 3'utr Rab2 FlyBase G10197.1 TGCCCGATTGCAATTCTGGGATAGGCGCAGCCGCTTCTGTAAAAGCTACTTTAGTGACTAACTAATAGAAGGTAGTTGAA 18 6698609 0.979494153 5 15 103 0.896551724 1.414973348 0.068965517 0.388888889 0.620689655 18 3 0 26 2R:6698559-6698638 7 11.5 1695 FBgn0014009 1265.866667 136.76 209.3033333 0.009084685 0.084088915 0.05494418 4 4 4 0.1 dme-miR-8-3p 6mer2-7 AGTATT 2R 6699354 6699359 + 2R_6699354_6699359_+ 1 0.999429098 0.999714549 0.000403687 Rab2 FBtr0086124 6698543 6699469 2R + 6699316 6699367 3'utr Rab2 FlyBase G13361.1 AGTGGTAACACGAAATGCTGCGATTCAATGATCAATTTAGTATTTTACGAAG 15 6699344 0.98412494 6 15 122 1 1.230448921 0.058823529 0.133333333 0.235294118 15 0 0 17 2R:6699316-6699367 6 Rab2 FBtr0086124 6698543 6699469 AGTATT 6mer2-7 dme-miR-8-3p 2R + 6699313 6699361 3'utr Rab2 FlyBase G10199.1 ACCAGTGGTAACACGAAATGCTGCGATTCAATGATCAATTTAGTATTTT 6 6699344 0.982868529 3 6 48 1 1.113943352 0.230769231 0.666666667 0.846153846 6 0 0 13 2R:6699313-6699361 6 4.5 1696 FBgn0014009 1265.866667 136.76 209.3033333 0.003554877 0.032904358 0.021499896 10 10 10 0.1 dme-miR-7-5p 6mer3-8 GTCTTC 2R 6700313 6700318 - 2R_6700313_6700318_- 0.999999949 0.999999982 0.999999966 7.07E-08 CG45092 FBtr0344559|FBtr0344560|FBtr0344561 6700219|6700219|6699693 6705333|6705333|6705333 2R - 6700308 6700336 3'utr CG45092 FlyBase G20186.1 CAAACGGGTCCCTCAATTGTCTTCTTTAC 7 6700320 0.758022796 2 7 63 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 2R:6700308-6700336 6 CG45092 FBtr0344561|FBtr0344560|FBtr0344559 6699693|6700219|6700219 6705333|6705333|6705333 GTCTTC 6mer3-8 dme-miR-7-5p 2R - 6700305 6700338 3'utr CG45092 FlyBase G15320.1 TGCAAACGGGTCCCTCAATTGTCTTCTTTACAAA 6 6700320 0.874754292 2 6 52 1 0.954242509 0.444444444 0.5 0.666666667 6 0 0 9 2R:6700305-6700338 6 6.5 1697 FBgn0266525 326.5166667 7.77 11.99666667 0.0199071 0.836550837 0.541817171 2 2 2 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 2R 6700470 6700475 - 2R_6700470_6700475_- 0.900796224 0.644898589 0.772847407 0.180946928 CG45092 FBtr0344559|FBtr0344560|FBtr0344561 6700219|6700219|6699693 6705333|6705333|6705333 2R - 6700450 6700499 3'utr CG45092 FlyBase G20187.1 AAGCTCTAGCCTGTAAGACTATACTTGACTTGACTAATCGTAGCTAAGTA 22 6700475 0.942897846 4 21 165 0.966666667 1.462397998 0 0.272727273 0.466666667 22 1 0 29 2R:6700450-6700499 6 CG45092 FBtr0344561|FBtr0344560|FBtr0344559 6699693|6700219|6700219 6705333|6705333|6705333 TTGACT 6mer3-8 dme-miR-1012-3p 2R - 6700452 6700499 3'utr CG45092 FlyBase G15321.1 AAGCTCTAGCCTGTAAGACTATACTTGACTTGACTAATCGTAGCTAAG 16 6700475 0.696402898 6 16 111 1 1.342422681 0 0.3125 0.5 16 0 0 22 2R:6700452-6700499 6 18.5 1698 FBgn0266525 326.5166667 7.77 11.99666667 0.05665867 2.380952381 1.542095026 0 0 0 0.1 dme-miR-305-5p 7mer-m8 AGTACAA 2R 6745772 6745778 + 2R_6745772_6745778_+ 0.576512658 0.643267155 0.609889906 0.04720256 phtf FBtr0086125 6745737 6746141 2R + 6745733 6745809 stop_codon phtf FlyBase G13370.1 AAGTAACCTATGCAAGGCGCAGACCCATCATATTTTTGTAGTACAACTTTTTAGAAACGCTTTAAGAGAAATCTAAC 18 6745769 0.798229395 7 15 139 0.85 1.230448921 0.05 0.111111111 0.2 18 3 0 17 2R:6745733-6745809 7 phtf FBtr0086125 6745737 6746141 AGTACAA 7mer-m8 dme-miR-305-5p 2R + 6745758 6745787 3'utr phtf FlyBase G10205.1 CATCATATTTTTGTAGTACAACTTTTTAGA 7 6745769 0.678057599 2 5 66 0.8 0.903089987 0 0.285714286 0.5 7 2 0 8 2R:6745758-6745787 7 7 1699 FBgn0028579 314.3333333 11.34333333 17.39 0.022269353 0.617102557 0.40253019 3 3 3 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 6748728 6748735 + 2R_6748728_6748735_+ 0.625361845 0.625363099 0.625362472 9.19E-07 CG3267 FBtr0086126 6748653 6748954 2R + 6748663 6748801 3'utr CG3267 FlyBase G13376.1 TGTATGCTGGAGAAATTTAATCGGAGCGCATTTACAGGCATTTAATGCCTTTATTTCGAAACTGTTGCATTTATTAGCGTTAAGGCAATTGTTAACTGTGTAATGTACAACTGATTGTTTATTAGGAACAGGCGTGTGA 667 6748727 0.986861481 29 646 6148 0.967405476 2.393282651 0.159061278 0.134932534 0.247718383 667 23 2 742 2R:6748663-6748801 8 CG3267 FBtr0086126 6748653 6748954 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 6748671 6748795 3'utr CG3267 FlyBase G10209.1 GGAGAAATTTAATCGGAGCGCATTTACAGGCATTTAATGCCTTTATTTCGAAACTGTTGCATTTATTAGCGTTAAGGCAATTGTTAACTGTGTAATGTACAACTGATTGTTTATTAGGAACAGGC 483 6748727 0.795692984 22 465 4393 0.964238411 2.260071388 0.147019868 0.407867495 0.621192053 483 24 3 728 2R:6748671-6748795 8 538 1700 FBgn0042083 366.6133333 20.74 31.70666667 1.46748618 25.94021215 16.96804037 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 6762254 6762260 - 2R_6762254_6762260_- 0.801970434 0.801969201 0.801969818 8.49E-07 Epac FBtr0329850|FBtr0329850|FBtr0329850|FBtr0112636|FBtr0112636|FBtr0112636|FBtr0329851|FBtr0329851|FBtr0329851|FBtr0329849|FBtr0329849|FBtr0329849 6761911|6761911|6761911|6761911|6761911|6761911|6761911|6761911|6761911|6759713|6759713|6759713 6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646 2R - 6762230 6762279 3'utr Epac FlyBase G20210.1 AAAACTAAACTTGGACGTGTGTGATACTAAACATTTATAGGAGGCAACAT 46 6762262 0.896325008 7 46 287 1 1.740362689 0.054545455 0.195652174 0.327272727 46 0 0 55 2R:6762230-6762279 7 Epac FBtr0329850|FBtr0329850|FBtr0329850|FBtr0112636|FBtr0112636|FBtr0112636|FBtr0329851|FBtr0329851|FBtr0329851|FBtr0329849|FBtr0329849|FBtr0329849 6761911|6761911|6761911|6761911|6761911|6761911|6761911|6761911|6761911|6759713|6759713|6759713 6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 6762237 6762280 3'utr Epac FlyBase G15337.1 AAAAACTAAACTTGGACGTGTGTGATACTAAACATTTATAGGAG 40 6762262 0.776554013 7 40 258 1 1.880813592 0.052631579 0.575 0.776315789 40 0 0 76 2R:6762237-6762280 7 42 1701 FBgn0085421 11.33333333 0.29 0.44 3.705882353 144.8275862 95.45454545 2 2 2 0.1 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 6762343 6762350 - 2R_6762343_6762350_- 0.605653989 0.605653953 0.605653971 0 Epac FBtr0329850|FBtr0112636|FBtr0329851|FBtr0329849 6761911|6761911|6761911|6759713 6762646|6762646|6762646|6762646 2R - 6762307 6762422 3'utr Epac FlyBase G20211.1 AGGAACTATCTCAATCTTCTAATGAACTGAAACCCAAACGCATTTTAATGCAAACGAGAAACTTTTTGCTTTAGTACAAAACGATGGAAAAGATGGAAAACAATTTGAAATTCGGC 43 6762352 0.985434524 12 41 334 0.958333333 1.662757832 0.458333333 0.093023256 0.1875 43 2 0 46 2R:6762307-6762422 8 Epac FBtr0329850|FBtr0112636|FBtr0329851|FBtr0329849 6761911|6761911|6761911|6759713 6762646|6762646|6762646|6762646 AGTACAAA 8mer-A1 dme-miR-305-5p 2R - 6762325 6762422 3'utr Epac FlyBase G15338.1 AGGAACTATCTCAATCTTCTAATGAACTGAAACCCAAACGCATTTTAATGCAAACGAGAAACTTTTTGCTTTAGTACAAAACGATGGAAAAGATGGAA 39 6762352 0.739158666 9 33 270 0.898305085 1.72427587 0.372881356 0.358974359 0.576271186 39 6 0 53 2R:6762325-6762422 8 32.5 1702 FBgn0085421 11.33333333 0.29 0.44 2.867647059 112.0689655 73.86363636 2 2 2 0.1 dme-miR-1007-3p 8mer-A1 TGAGCTTA 2R 6762546 6762553 - 2R_6762546_6762553_- 0.625363199 0.625363338 0.625363268 7.07E-08 Epac FBtr0329850|FBtr0112636|FBtr0329851|FBtr0329849 6761911|6761911|6761911|6759713 6762646|6762646|6762646|6762646 2R - 6762523 6762576 3'utr Epac FlyBase G20213.1 AACCGCAATTAGCTGCACAGTTATGAGCTTAGCCGGGTTGTTGTTGCTTTCCGA 31 6762553 0.82651848 4 31 272 1 1.556302501 0.083333333 0.161290323 0.277777778 31 0 0 36 2R:6762523-6762576 8 Epac FBtr0329850|FBtr0112636|FBtr0329851|FBtr0329849 6761911|6761911|6761911|6759713 6762646|6762646|6762646|6762646 TGAGCTTA 8mer-A1 dme-miR-1007-3p 2R - 6762528 6762575 3'utr Epac FlyBase G15340.1 ACCGCAATTAGCTGCACAGTTATGAGCTTAGCCGGGTTGTTGTTGCTT 27 6762553 0.818818673 4 26 227 0.973684211 1.267171728 0.236842105 0.296296296 0.5 27 0 1 37 2R:6762528-6762575 8 28.5 1703 FBgn0085421 11.33333333 0.29 0.44 2.514705882 98.27586207 64.77272727 0 0 0 0.1 dme-bantam-3p 6mer3-8 TGATCT 2R 6814355 6814360 + 2R_6814355_6814360_+ 0.981864663 0.495382788 0.738623726 0.34399465 koi FBtr0335515|FBtr0335517|FBtr0335516 6814313|6814313|6814313 6814812|6814812|6814812 2R + 6814349 6814473 3'utr koi FlyBase G13408.1 ATTTAGTGATCTGGTTGGGTGCAACGCCCCTTGCACTTAGACAAATATGAGAAACTTTCTTTATGAACAATATGAGTACAAAATAAAGCATTTGATCCGTTTTTTGTCCGTCTGCTTGACCCGCA 49 6814362 0.781396755 20 45 341 0.945454545 1.716003344 0.109090909 0.12244898 0.218181818 49 3 0 52 2R:6814349-6814473 6 koi FBtr0335516|FBtr0335515|FBtr0335517 6814313|6814313|6814313 6814812|6814812|6814812 TGATCT 6mer3-8 dme-bantam-3p 2R + 6814349 6814388 3'utr koi FlyBase G10229.1 ATTTAGTGATCTGGTTGGGTGCAACGCCCCTTGCACTTAG 16 6814361 0.661864172 6 12 121 0.785714286 1.342422681 0.107142857 0.625 0.785714286 16 6 0 22 2R:6814349-6814388 6 16 1704 FBgn0265003 944.7366667 44.58333333 68.22333333 0.016935936 0.358878505 0.234523868 -7 -6 -6.5 0.1 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 6814423 6814430 + 2R_6814423_6814430_+ 0.605654138 0.605654135 0.605654137 0 koi FBtr0335515|FBtr0335517|FBtr0335516 6814313|6814313|6814313 6814812|6814812|6814812 2R + 6814349 6814473 3'utr koi FlyBase G13408.1 ATTTAGTGATCTGGTTGGGTGCAACGCCCCTTGCACTTAGACAAATATGAGAAACTTTCTTTATGAACAATATGAGTACAAAATAAAGCATTTGATCCGTTTTTTGTCCGTCTGCTTGACCCGCA 49 6814421 0.781396755 20 45 341 0.945454545 1.716003344 0.109090909 0.12244898 0.218181818 49 3 0 52 2R:6814349-6814473 8 koi FBtr0335516|FBtr0335515|FBtr0335517 6814313|6814313|6814313 6814812|6814812|6814812 AGTACAAA 8mer-A1 dme-miR-305-5p 2R + 6814396 6814437 3'utr koi FlyBase G10230.1 TGAGAAACTTTCTTTATGAACAATATGAGTACAAAATAAAGC 14 6814421 0.698419374 5 12 70 0.769230769 1.301029996 0.192307692 0.571428571 0.769230769 14 6 0 20 2R:6814396-6814437 8 15 1705 FBgn0265003 944.7366667 44.58333333 68.22333333 0.01587744 0.336448598 0.219866126 2 2 2 0.1 dme-miR-1008-3p 7mer-A1 GCTGTGA 2R 6818188 6818194 + 2R_6818188_6818194_+ 0.514535605 0.539462661 0.526999133 0.017626121 koi FBtr0335514|FBtr0335512|FBtr0335513 6817004|6817004|6817004 6818199|6818199|6818199 2R + 6818161 6818199 3'utr koi FlyBase G13421.1 TTCACCATTTTTAACAATAAACACATTGCTGTGAAAAAA 79 6818186 0.764177338 3 79 334 1 1.973127854 0.010638298 0.164556962 0.29787234 79 0 0 94 2R:6818161-6818199 7 koi FBtr0335513|FBtr0335514|FBtr0335512 6817004|6817004|6817004 6818199|6818199|6818199 GCTGTGA 7mer-A1 dme-miR-1008-3p 2R + 6818154 6818199 3'utr koi FlyBase G10243.1 AAGGTTTTTCACCATTTTTAACAATAAACACATTGCTGTGAAAAAA 33 6818186 0.948439318 4 33 149 1 1.716003344 0.076923077 0.424242424 0.634615385 33 0 0 52 2R:6818154-6818199 7 56 1706 FBgn0265003 944.7366667 44.58333333 68.22333333 0.059275777 1.256074766 0.820833537 2 2 2 0.1 dme-bantam-3p 6mer3-8 TGATCT 2R 6876228 6876233 - 2R_6876228_6876233_- 0.734276672 0.760560977 0.747418824 0.018585807 Spn42Da FBtr0086201|FBtr0086198|FBtr0086205|FBtr0300336|FBtr0086200|FBtr0086202|FBtr0086199 6876151|6876151|6876151|6876151|6876151|6876151|6876151 6876389|6876389|6876596|6876596|6876596|6876596|6876596 2R - 6876162 6876261 3'utr Spn42Da FlyBase G20243.1 CACAAAATTATAGTCTGTGCGCAATTGATGATCTTATATATACACTTAATATTTTTATACTAACCAAGCATGTAGCCGTAGCCTCAATAAAGTCTAAAAG 262 6876233 0.985890142 17 254 2158 0.965517241 2.011429462 0.520376176 0.187022901 0.332288401 262 9 2 308 2R:6876162-6876261 6 Spn42Da FBtr0300336|FBtr0086205|FBtr0086198|FBtr0086201|FBtr0086199|FBtr0086202|FBtr0086200 6876151|6876151|6876151|6876151|6876151|6876151|6876151 6876596|6876596|6876389|6876389|6876596|6876596|6876596 TGATCT 6mer3-8 dme-bantam-3p 2R - 6876210 6876261 3'utr Spn42Da FlyBase G15364.2 CACAAAATTATAGTCTGTGCGCAATTGATGATCTTATATATACACTTAATAT 211 6876233 0.708994829 14 201 1631 0.962848297 2.191730393 0.551083591 0.379146919 0.594427245 211 11 1 311 2R:6876210-6876261 6 201 1707 FBgn0265137 341.8233333 23.49666667 36.20333333 0.588023053 8.55440488 5.551974956 0 0 0 0.1 dme-miR-980-3p 6mer3-8 GGCAGC 2R 6876405 6876410 - 2R_6876405_6876410_- 0.999999581 0.99999964 0.999999611 0 Spn42Da FBtr0086205|FBtr0300336|FBtr0086200|FBtr0086202|FBtr0086199 6876151|6876151|6876151|6876151|6876151 6876596|6876596|6876596|6876596|6876596 2R - 6876339 6876435 3'utr Spn42Da FlyBase G20244.2 CAAGGACTCAACCGCTCTCTTCGCTGGCAGCATAAAGAAACTCTAAATAGGCAAACATACTAACCAATCCACAATGTTACTCGAGGGTCTCGTATTC 70 6876411 0.863574409 12 65 403 0.928571429 1.892094603 0.238095238 0.157142857 0.297619048 70 6 0 78 2R:6876339-6876435 6 Spn42Da FBtr0300336|FBtr0086205|FBtr0086199|FBtr0086202|FBtr0086200 6876151|6876151|6876151|6876151|6876151 6876596|6876596|6876596|6876596|6876596 GGCAGC 6mer3-8 dme-miR-980-3p 2R - 6876332 6876434 3'utr Spn42Da FlyBase G15365.1 AAGGACTCAACCGCTCTCTTCGCTGGCAGCATAAAGAAACTCTAAATAGGCAAACATACTAACCAATCCACAATGTTACTCGAGGGTCTCGTATTCATTTAAC 54 6876411 0.91980082 10 47 306 0.891566265 1.392110465 0.301204819 0.333333333 0.56626506 54 7 2 74 2R:6876332-6876434 6 40 1708 FBgn0265137 341.8233333 23.49666667 36.20333333 0.117019513 1.70236913 1.104870638 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 6972183 6972189 - 2R_6972183_6972189_- 0.793832234 0.722166654 0.757999444 0.050675161 Cyp6u1 FBtr0345011|FBtr0345011|FBtr0345011|FBtr0345802|FBtr0345802|FBtr0345802|FBtr0086185|FBtr0086185|FBtr0086185 6972110|6972110|6972110|6971994|6971994|6971994|6972110|6972110|6972110 6972304|6972304|6972304|6972304|6972304|6972304|6972304|6972304|6972304 2R - 6972168 6972228 3'utr Cyp6u1 FlyBase G20259.1 ATGCACCTTTTTCGTTGATTTTCCTAAGCTGTGGACTTGTGTGATAATGCTGACGATGACT 42 6972191 0.634960819 9 38 366 0.901960784 1.361727836 0.235294118 0.19047619 0.333333333 42 4 1 46 2R:6972168-6972228 7 Cyp6u1 FBtr0086185|FBtr0086185|FBtr0086185|FBtr0345011|FBtr0345011|FBtr0345011|FBtr0345802|FBtr0345802|FBtr0345802 6972110|6972110|6972110|6972110|6972110|6972110|6971994|6971994|6971994 6972304|6972304|6972304|6972304|6972304|6972304|6972304|6972304|6972304 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 6972162 6972215 3'utr Cyp6u1 FlyBase G15377.1 GTTGATTTTCCTAAGCTGTGGACTTGTGTGATAATGCTGACGATGACTTTTATA 12 6972192 0.983267933 7 12 91 1 1.146128036 0.571428571 0.166666667 0.285714286 12 0 0 14 2R:6972162-6972215 7 21 1709 FBgn0033121 218 13.62333333 20.59666667 0.096330275 1.541472963 1.019582457 2 3 2.5 0.1 dme-miR-252-5p 7mer-m8 GTACTTA 2R 6975796 6975802 - 2R_6975796_6975802_- 0.560655431 0.588299917 0.574477674 0.019547613 vimar FBtr0086183|FBtr0086182 6975283|6975283 6976552|6976552 2R - 6975747 6975862 3'utr vimar FlyBase G20266.1 ACAATAACAACAAATCGTGGTGATATCGCTAAATATATTTAATAAATGTATTTTATGATTGTACTTATAATTTTCAATCGACCTCTTTTAAACCGTTGCTGGCACAAACCAAAAAC 52 6975777 0.990545406 14 44 450 0.875 0.970036777 0.0625 0.192307692 0.34375 52 3 5 56 2R:6975747-6975862 7 vimar FBtr0086182|FBtr0086183 6975283|6975283 6976552|6976552 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 6975745 6975815 3'utr vimar FlyBase G15382.1 GTATTTTATGATTGTACTTATAATTTTCAATCGACCTCTTTTAAACCGTTGCTGGCACAAACCAAAAACGA 22 6975785 0.990150984 8 21 208 0.965517241 1.447158031 0.034482759 0.181818182 0.379310345 22 1 0 28 2R:6975745-6975815 7 6.5 1710 FBgn0022960 1005.046667 35.31333333 54.35 0.006467361 0.184066453 0.119595216 -25 -17 -21 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 2R 6976126 6976131 - 2R_6976126_6976131_- 0.999998899 0.999999988 0.999999443 7.78E-07 vimar FBtr0086183|FBtr0086182 6975283|6975283 6976552|6976552 2R - 6976108 6976155 3'utr vimar FlyBase G20267.1 CAAAGCAACGATTCAGATGTAGACTTGACTGTAGTTTGGTAAGAAGAA 40 6976136 0.810725046 6 38 321 0.951219512 1.591064607 0.219512195 0.025 0.048780488 40 2 0 39 2R:6976108-6976155 6 vimar FBtr0086182|FBtr0086183 6975283|6975283 6976552|6976552 TTGACT 6mer3-8 dme-miR-1012-3p 2R - 6976096 6976151 3'utr vimar FlyBase G15384.1 GCAACGATTCAGATGTAGACTTGACTGTAGTTTGGTAAGAAGAAAGTGCAGATTCA 18 6976135 0.989496595 5 15 142 0.8 1.079181246 0.2 0.444444444 0.666666667 18 5 1 24 2R:6976096-6976151 6 29 1711 FBgn0022960 1005.046667 35.31333333 54.35 0.028854382 0.821219558 0.533578657 5 4 4.5 0.1 dme-miR-283-5p 6mer3-8 TGATAT 2R 6988812 6988817 + 2R_6988812_6988817_+ 0.98257627 0.971746394 0.977161332 0.007657896 CG17002 FBtr0303226|FBtr0086170|FBtr0303225 6988767|6988767|6988767 6988922|6988922|6988922 2R + 6988773 6988871 3'utr CG17002 FlyBase G13437.1 TAACCCCTAACCCCTTTTGTCGCTACGGAACTCGCTAACTGATATACTTACGATTTTAAATAGACATTACAACACTGACTACGCTTCCCACGTGAAGTC 119 6988808 0.959036675 9 114 764 0.963235294 1.8162413 0.014705882 0.134453782 0.242647059 119 4 1 131 2R:6988773-6988871 6 CG17002 FBtr0303225|FBtr0086170|FBtr0303226 6988767|6988767|6988767 6988922|6988922|6988922 TGATAT 6mer3-8 dme-miR-283-5p 2R + 6988771 6988823 3'utr CG17002 FlyBase G10252.1 TCTAACCCCTAACCCCTTTTGTCGCTACGGAACTCGCTAACTGATATACTTAC 51 6988808 0.849952045 5 50 312 0.971014493 1.826074803 0 0.31372549 0.492753623 51 2 0 67 2R:6988771-6988823 6 79 1712 FBgn0033122 348 25.2 38.42666667 0.227011494 3.134920635 2.055863983 4 4 4 0.1 dme-miR-276a-3p 6mer3-8 AGTTCC 2R 6993913 6993918 + 2R_6993913_6993918_+ 0.985033893 0.999743481 0.992388687 0.010401258 CG30159 FBtr0089760|FBtr0089761|FBtr0301713 6993846|6993846|6993846 6994306|6994306|6994306 2R + 6993902 6993946 3'utr CG30159 FlyBase G13441.1 ACCATTAACTTAGTTCCATGGCCAGCTACTCTCTATATTTTTATT 16 6993920 0.935077403 2 16 129 1 1.230448921 0 0.0625 0.117647059 16 0 0 17 2R:6993902-6993946 6 CG30159 FBtr0301713|FBtr0089761|FBtr0089760 6993846|6993846|6993846 6994306|6994306|6994306 AGTTCC 6mer3-8 dme-miR-276a-3p 2R + 6993786 6993941 stop_codon CG30159 FlyBase G10253.1 ACAACGAACTGAGGCAGCGCTGGTTGCCCAAGGAGAAGCTGCTGCCGGAGCTAGTGCGCTGATTGCGATCTCCCCGTTCCTGCCTCGATGCTATTTACAGGGCTACCTAGCTCGCCACCATTAACTTAGTTCCATGGCCAGCTACTCTCTATATTT 36 6993920 0.982390259 12 33 249 0.909090909 1.698970004 0.218181818 0.444444444 0.636363636 36 5 0 50 2R:6993786-6993941 6 13 1713 FBgn0050159 319.0933333 29.40333333 44.86 0.040740431 0.442126743 0.289790459 -7 -7 -7 0.1 dme-miR-282-5p 6mer3-8 AGAGGC 2R 7017790 7017795 + 2R_7017790_7017795_+ 0.999945207 0.999954092 0.99994965 6.29E-06 Tsp42Ee FBtr0336871|FBtr0086180 7017760|7017760 7018362|7018362 2R + 7017741 7017872 stop_codon Tsp42Ee FlyBase G13454.1 AAGCGCCGGAACGCCTACTAAGCAATAGGTGTATCCATCAACTACATCTAGAGGCACACCCACATCCAGTAGCACACACACCTCACATTCTCATTAACTTTTACAGTCGTTGAACGCACATACACAACGGGA 56 7017789 0.968335448 12 50 220 0.909090909 1.146128036 0.051948052 0.25 0.454545455 56 3 4 70 2R:7017741-7017872 6 Tsp42Ee FBtr0086180|FBtr0336871 7017760|7017760 7018362|7018362 AGAGGC 6mer3-8 dme-miR-282-5p 2R + 7017772 7017950 3'utr Tsp42Ee FlyBase G10263.1 TATCCATCAACTACATCTAGAGGCACACCCACATCCAGTAGCACACACACCTCACATTCTCATTAACTTTTACAGTCGTTGAACGCACATACACAACGGGATACACAATAACACCTTGAAATAAGCCATTTAAGTGGATATTTGTCACGGAAAAACAAGAAGAAGCTTAGTTTAAGGCG 58 7017789 0.952836223 14 53 235 0.917525773 1.472268752 0.12371134 0.465517241 0.680412371 58 6 2 89 2R:7017772-7017950 6 32 1714 FBgn0029506 12272.56 1084.96 1657.746667 0.002607443 0.029494175 0.019303311 1 1 1 0.1 dme-miR-999-3p 6mer3-8 AGTTAA 2R 7272832 7272837 - 2R_7272832_7272837_- 1 0.999922596 0.999961298 5.47E-05 Br140 FBtr0345370|FBtr0089021 7272273|7272531 7273271|7273271 2R - 7272789 7272844 3'utr Br140 FlyBase G20296.1 ATGTTTAAGTTAAATAGTTTTAAGCTCTCCTACTGTTAAGCCCGGAATCAACATTA 18 7272833 0.998449804 6 7 158 0.375 0.653212514 0.041666667 0.166666667 0.375 18 14 1 9 2R:7272789-7272844 6 Br140 FBtr0089021|FBtr0345370 7272531|7272273 7273271|7273271 AGTTAA 6mer3-8 dme-miR-999-3p 2R - 7272784 7272835 3'utr Br140 FlyBase G15401.1 TTAAATAGTTTTAAGCTCTCCTACTGTTAAGCCCGGAATCAACATTATAAGC 20 7272826 0.995949793 9 10 174 0.448275862 0.636822098 0.034482759 0.25 0.482758621 20 14 2 13 2R:7272784-7272835 4 13.5 1715 FBgn0033155 560.6533333 12.28666667 18.82333333 0.024079051 1.098752035 0.717194971 -4 -11 -7.5 0.1 dme-miR-12-5p 6mer2-7 ATACTC 2R 7273157 7273162 - 2R_7273157_7273162_- 0.999997975 0.999996765 0.99999737 8.49E-07 Br140 FBtr0345370|FBtr0089021 7272273|7272531 7273271|7273271 2R - 7273074 7273308 stop_codon Br140 FlyBase G20299.1 CGACTTGGAGGGCCAAGGACCCGATCCGATCATGTGAAAGCTGATGGCCCGATTGCAACTGTAGGCGCCGCTCGAAAGAATTCAGCCATTTAGTTAGCTCCCCCACAAGGGATCGCCGTATTTTTATATCTCGTTGTTGTTACTTGATACTCGAAGATGACGCAGTTGAAGAAGGCCCTCCATTAGAGTATTTCGTTGGCGAATTTCCAATTTGCACTGCAAGTGTCTTTAATTT 88 7273164 0.98305302 22 84 635 0.963302752 2.021189299 0.412844037 0.215909091 0.366972477 88 4 0 105 2R:7273074-7273308 6 Br140 FBtr0089021|FBtr0345370 7272531|7272273 7273271|7273271 ATACTC 6mer2-7 dme-miR-12-5p 2R - 7273107 7273183 3'utr Br140 FlyBase G15403.1 ATATCTCGTTGTTGTTACTTGATACTCGAAGATGACGCAGTTGAAGAAGGCCCTCCATTAGAGTATTTCGTTGGCGA 58 7273164 0.768418041 8 52 450 0.926829268 1.278753601 0.353658537 0.293103448 0.5 58 3 3 76 2R:7273107-7273183 6 45 1716 FBgn0033155 560.6533333 12.28666667 18.82333333 0.080263502 3.662506782 2.390649903 2 2 2 0.1 dme-bantam-3p 6mer3-8 TGATCT 2R 7319607 7319612 - 2R_7319607_7319612_- 0.999999771 0.999999884 0.999999827 7.07E-08 Dscam1 FBtr0111083|FBtr0111055|FBtr0111050|FBtr0111066|FBtr0111070|FBtr0111077|FBtr0111100|FBtr0111076|FBtr0111060|FBtr0306779|FBtr0089019|FBtr0111078|FBtr0089020|FBtr0111058|FBtr0111052|FBtr0111087|FBtr0306786|FBtr0306780|FBtr0111085|FBtr0111065|FBtr0111099|FBtr0306772|FBtr0111097|FBtr0306774|FBtr0306783|FBtr0111057|FBtr0306771|FBtr0111061|FBtr0089018|FBtr0111102|FBtr0111068|FBtr0306784|FBtr0306777|FBtr0306778|FBtr0111101|FBtr0306787|FBtr0111082|FBtr0111074|FBtr0111098|FBtr0111096|FBtr0306782|FBtr0111073|FBtr0111088|FBtr0334801|FBtr0111064|FBtr0111062|FBtr0111049|FBtr0111072|FBtr0111084|FBtr0111081|FBtr0111089|FBtr0111071|FBtr0306770|FBtr0111092|FBtr0111051|FBtr0306773|FBtr0111069|FBtr0111063|FBtr0306781|FBtr0306776|FBtr0111053|FBtr0111080|FBtr0111059|FBtr0111056|FBtr0111075|FBtr0089016|FBtr0306769|FBtr0306775|FBtr0111067|FBtr0111079|FBtr0306767|FBtr0111094|FBtr0306768|FBtr0306785|FBtr0111054 7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7317922|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552 7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320675|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682 2R - 7319560 7319710 3'utr Dscam1 FlyBase G20310.1 ACGATTTATTAAACCAATTCTGATATAGACCGTTCTGAACATGAGTTATACGCATTTGAAGCTTTAAGAGAACCTGAAATTGTTTATTTCACTTCATTTGATCTATCCTAAGTTATTAGTTCATAAGTTGCTAAATATATGATTTTGATTT 150 7319613 0.991665558 26 144 1585 0.966666667 1.763427994 0.055555556 0.146666667 0.288888889 150 4 2 174 2R:7319560-7319710 6 Dscam1 FBtr0306787|FBtr0111101|FBtr0111074|FBtr0111082|FBtr0111102|FBtr0111063|FBtr0306778|FBtr0111053|FBtr0306777|FBtr0111068|FBtr0306771|FBtr0111057|FBtr0089018|FBtr0111061|FBtr0089016|FBtr0111099|FBtr0111079|FBtr0306783|FBtr0306774|FBtr0111097|FBtr0306780|FBtr0306786|FBtr0111065|FBtr0111085|FBtr0089020|FBtr0306782|FBtr0111078|FBtr0089019|FBtr0111052|FBtr0111058|FBtr0111076|FBtr0111100|FBtr0306779|FBtr0111060|FBtr0111050|FBtr0111055|FBtr0111084|FBtr0111083|FBtr0111077|FBtr0111066|FBtr0111094|FBtr0306767|FBtr0111054|FBtr0306785|FBtr0306768|FBtr0306775|FBtr0306769|FBtr0306772|FBtr0111067|FBtr0111080|FBtr0111075|FBtr0111056|FBtr0111059|FBtr0306781|FBtr0111069|FBtr0306776|FBtr0306784|FBtr0111092|FBtr0306770|FBtr0111071|FBtr0306773|FBtr0111051|FBtr0111081|FBtr0111072|FBtr0111089|FBtr0111070|FBtr0111064|FBtr0334801|FBtr0111088|FBtr0111049|FBtr0111062|FBtr0111096|FBtr0111098|FBtr0111087|FBtr0111073 7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7317922|7319552|7319552|7319552|7319552|7319552|7319552|7319552 7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320675|7320682|7320682|7320682|7320682|7320682|7320682|7320682 TGATCT 6mer3-8 dme-bantam-3p 2R - 7319554 7319697 3'utr Dscam1 FlyBase G15417.1 CCAATTCTGATATAGACCGTTCTGAACATGAGTTATACGCATTTGAAGCTTTAAGAGAACCTGAAATTGTTTATTTCACTTCATTTGATCTATCCTAAGTTATTAGTTCATAAGTTGCTAAATATATGATTTTGATTTTATTTT 86 7319613 0.990918916 18 83 870 0.946564885 2.093421685 0.076335878 0.348837209 0.572519084 86 7 0 124 2R:7319554-7319697 6 91.5 1717 FBgn0033159 794.49 12.18 18.55333333 0.115168221 7.512315271 4.931728351 1 1 1 0.1 dme-miR-263a-5p 6mer2-7 TGCCAT 2R 7320150 7320155 - 2R_7320150_7320155_- 0.999993943 0.697007742 0.848500843 0.214243597 Dscam1 FBtr0111083|FBtr0111055|FBtr0111050|FBtr0111066|FBtr0111070|FBtr0111077|FBtr0111100|FBtr0111076|FBtr0111060|FBtr0306779|FBtr0089019|FBtr0111078|FBtr0089020|FBtr0111058|FBtr0111052|FBtr0111087|FBtr0306786|FBtr0306780|FBtr0111085|FBtr0111065|FBtr0111099|FBtr0306772|FBtr0111097|FBtr0306774|FBtr0306783|FBtr0111057|FBtr0306771|FBtr0111061|FBtr0089018|FBtr0111102|FBtr0111068|FBtr0306784|FBtr0306777|FBtr0306778|FBtr0111101|FBtr0306787|FBtr0111082|FBtr0111074|FBtr0111098|FBtr0111096|FBtr0306782|FBtr0111073|FBtr0111088|FBtr0334801|FBtr0111064|FBtr0111062|FBtr0111049|FBtr0111072|FBtr0111084|FBtr0111081|FBtr0111089|FBtr0111071|FBtr0306770|FBtr0111092|FBtr0111051|FBtr0306773|FBtr0111069|FBtr0111063|FBtr0306781|FBtr0306776|FBtr0111053|FBtr0111080|FBtr0111059|FBtr0111056|FBtr0111075|FBtr0089016|FBtr0306769|FBtr0306775|FBtr0111067|FBtr0111079|FBtr0306767|FBtr0111094|FBtr0306768|FBtr0306785|FBtr0111054 7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7317922|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552 7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320675|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682 2R - 7320027 7320402 3'utr Dscam1 FlyBase G20312.1 ATATAAGTACATTCAATGGATAACTACTATAAGAGAGTGCTGGAGACACTGAAGGAAATTACTCAAGTTATTCGAGAGGAACAGAAAACGAAATCTCAAGATCAAGATCATACTTACGTATTCGAACTAATTTTCAATAATGTACTTTAGTTTTAAGCGGTGTCTACCGAAATATCAGAGCAACAGCAACTGAGATGGATTCTTGTGTGTAAGAGGAGATGATTCGAAATCTGTTTGTGTAAACTTTTGCCATCTATGCCAGGAGCAGAAAACTCATCCTTTGCCTAGCCTAAGTCAAAGTCATAATATTAACTCGTCTAATTGATATATTTAGTCGTAACATATGCGTAATATGTATGATTTCTTCCTATGCATT 198 7320146 0.935664772 64 181 1332 0.918803419 1.48734042 0.153846154 0.146464646 0.277777778 198 13 6 215 2R:7320027-7320402 6 Dscam1 FBtr0306787|FBtr0111101|FBtr0111074|FBtr0111082|FBtr0111102|FBtr0111063|FBtr0306778|FBtr0111053|FBtr0306777|FBtr0111068|FBtr0306771|FBtr0111057|FBtr0089018|FBtr0111061|FBtr0089016|FBtr0111099|FBtr0111079|FBtr0306783|FBtr0306774|FBtr0111097|FBtr0306780|FBtr0306786|FBtr0111065|FBtr0111085|FBtr0089020|FBtr0306782|FBtr0111078|FBtr0089019|FBtr0111052|FBtr0111058|FBtr0111076|FBtr0111100|FBtr0306779|FBtr0111060|FBtr0111050|FBtr0111055|FBtr0111084|FBtr0111083|FBtr0111077|FBtr0111066|FBtr0111094|FBtr0306767|FBtr0111054|FBtr0306785|FBtr0306768|FBtr0306775|FBtr0306769|FBtr0306772|FBtr0111067|FBtr0111080|FBtr0111075|FBtr0111056|FBtr0111059|FBtr0306781|FBtr0111069|FBtr0306776|FBtr0306784|FBtr0111092|FBtr0306770|FBtr0111071|FBtr0306773|FBtr0111051|FBtr0111081|FBtr0111072|FBtr0111089|FBtr0111070|FBtr0111064|FBtr0334801|FBtr0111088|FBtr0111049|FBtr0111062|FBtr0111096|FBtr0111098|FBtr0111087|FBtr0111073 7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7317922|7319552|7319552|7319552|7319552|7319552|7319552|7319552 7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320675|7320682|7320682|7320682|7320682|7320682|7320682|7320682 TGCCAT 6mer2-7 dme-miR-263a-5p 2R - 7320003 7320312 3'utr Dscam1 FlyBase G15420.1 AAATCTCAAGATCAAGATCATACTTACGTATTCGAACTAATTTTCAATAATGTACTTTAGTTTTAAGCGGTGTCTACCGAAATATCAGAGCAACAGCAACTGAGATGGATTCTTGTGTGTAAGAGGAGATGATTCGAAATCTGTTTGTGTAAACTTTTGCCATCTATGCCAGGAGCAGAAAACTCATCCTTTGCCTAGCCTAAGTCAAAGTCATAATATTAACTCGTCTAATTGATATATTTAGTCGTAACATATGCGTAATATGTATGATTTCTTCCTATGCATTTTATAATTCGTATGGACAGCGCAC 79 7320146 0.985156236 37 72 585 0.917355372 1.443262987 0.123966942 0.417721519 0.619834711 79 7 3 111 2R:7320003-7320312 6 23.5 1718 FBgn0033159 794.49 12.18 18.55333333 0.029578723 1.929392447 1.266618757 -9 -9 -9 0.1 dme-miR-79-3p 6mer3-8 TAGCTT 2R 7320640 7320645 - 2R_7320640_7320645_- 0.999998165 0.99993338 0.999965772 4.58E-05 Dscam1 FBtr0111083|FBtr0111055|FBtr0111050|FBtr0111066|FBtr0111070|FBtr0111077|FBtr0111100|FBtr0111076|FBtr0111060|FBtr0306779|FBtr0089019|FBtr0111078|FBtr0089020|FBtr0111058|FBtr0111052|FBtr0111087|FBtr0306786|FBtr0306780|FBtr0111085|FBtr0111065|FBtr0111099|FBtr0306772|FBtr0111097|FBtr0306774|FBtr0306783|FBtr0111057|FBtr0306771|FBtr0111061|FBtr0089018|FBtr0111102|FBtr0111068|FBtr0306784|FBtr0306777|FBtr0306778|FBtr0111101|FBtr0306787|FBtr0111082|FBtr0111074|FBtr0111098|FBtr0111096|FBtr0306782|FBtr0111073|FBtr0111088|FBtr0334801|FBtr0111064|FBtr0111062|FBtr0111049|FBtr0111072|FBtr0111084|FBtr0111081|FBtr0111089|FBtr0111071|FBtr0306770|FBtr0111092|FBtr0111051|FBtr0306773|FBtr0111069|FBtr0111063|FBtr0306781|FBtr0306776|FBtr0111053|FBtr0111080|FBtr0111059|FBtr0111056|FBtr0111075|FBtr0089016|FBtr0306769|FBtr0306775|FBtr0111067|FBtr0111079|FBtr0306767|FBtr0111094|FBtr0306768|FBtr0306785|FBtr0111054 7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7317922|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552 7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320675|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682 2R - 7320601 7320707 stop_codon Dscam1 FlyBase G20314.1 AGCCTACGATACTATGGCAGTGTAATTTGTAAGCGCCCTCTGCGGCGGTGGGCGTGGCATTTTAGCTTAGTGTTTTAGGTGCATGAAGTGCGTGGGAGTTGAATGAC 32 7320646 0.815431043 14 30 234 0.914285714 1.505149978 0.228571429 0.09375 0.171428571 32 3 0 32 2R:7320601-7320707 6 Dscam1 FBtr0306787|FBtr0111101|FBtr0111074|FBtr0111082|FBtr0111102|FBtr0111063|FBtr0306778|FBtr0111053|FBtr0306777|FBtr0111068|FBtr0306771|FBtr0111057|FBtr0089018|FBtr0111061|FBtr0089016|FBtr0111099|FBtr0111079|FBtr0306783|FBtr0306774|FBtr0111097|FBtr0306780|FBtr0306786|FBtr0111065|FBtr0111085|FBtr0089020|FBtr0306782|FBtr0111078|FBtr0089019|FBtr0111052|FBtr0111058|FBtr0111076|FBtr0111100|FBtr0306779|FBtr0111060|FBtr0111050|FBtr0111055|FBtr0111084|FBtr0111083|FBtr0111077|FBtr0111066|FBtr0111094|FBtr0306767|FBtr0111054|FBtr0306785|FBtr0306768|FBtr0306775|FBtr0306769|FBtr0306772|FBtr0111067|FBtr0111080|FBtr0111075|FBtr0111056|FBtr0111059|FBtr0306781|FBtr0111069|FBtr0306776|FBtr0306784|FBtr0111092|FBtr0306770|FBtr0111071|FBtr0306773|FBtr0111051|FBtr0111081|FBtr0111072|FBtr0111089|FBtr0111070|FBtr0111064|FBtr0334801|FBtr0111088|FBtr0111049|FBtr0111062|FBtr0111096|FBtr0111098|FBtr0111087|FBtr0111073 7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7317922|7319552|7319552|7319552|7319552|7319552|7319552|7319552 7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320675|7320682|7320682|7320682|7320682|7320682|7320682|7320682 TAGCTT 6mer3-8 dme-miR-79-3p 2R - 7320592 7320708 stop_codon Dscam1 FlyBase G15423.1 CAGCCTACGATACTATGGCAGTGTAATTTGTAAGCGCCCTCTGCGGCGGTGGGCGTGGCATTTTAGCTTAGTGTTTTAGGTGCATGAAGTGCGTGGGAGTTGAATGACACTTAGAGA 24 7320646 0.974802603 12 22 136 1 1.602059991 0.325 0.5 0.7 24 0 0 40 2R:7320592-7320708 6 11 1719 FBgn0033159 794.49 12.18 18.55333333 0.01384536 0.903119869 0.592885375 1 1 1 0.1 dme-miR-7-5p 7mer-m8 GTCTTCC 2R 7382570 7382576 - 2R_7382570_7382576_- 0.705950116 0.705950238 0.705950177 7.07E-08 cos FBtr0089015|FBtr0336916 7382174|7382521 7383196|7383196 2R - 7382528 7382609 3'utr cos FlyBase G20350.1 TGTTAGTTTTAGCTTAGTTGTAAACACTATTGTGTCTTCCCTCGAATTTTAATTGACCTTCGATACCAATTACAACATACGT 35 7382578 0.847022236 10 35 328 1 1.633468456 0.162790698 0.171428571 0.325581395 35 0 0 43 2R:7382528-7382609 7 cos FBtr0089015|FBtr0336916 7382174|7382521 7383196|7383196 GTCTTCC 7mer-m8 dme-miR-7-5p 2R - 7382547 7382600 3'utr cos FlyBase G15442.1 TAGCTTAGTTGTAAACACTATTGTGTCTTCCCTCGAATTTTAATTGACCTTCGA 22 7382577 0.699560207 5 18 214 0.827586207 1.380211242 0.103448276 0.318181818 0.482758621 22 5 0 24 2R:7382547-7382600 7 25 1720 FBgn0000352 545 14.08 21.54666667 0.04587156 1.775568182 1.160272277 2 1 1.5 0.1 dme-miR-1002-5p 8mer-A1 CTACTTAA 2R 7382727 7382734 - 2R_7382727_7382734_- 0.598960116 0.61837918 0.608669648 0.013731377 cos FBtr0089015|FBtr0336916 7382174|7382521 7383196|7383196 2R - 7382689 7382781 3'utr cos FlyBase G20351.1 ATGAAAGTAACTATCCTCATGAGATTCAACCGTAAAGACTTGACCTGCTACTTAAGATACTCGCAAGACAAACCGTACACAAAACTCGCTCAA 32 7382762 0.971748242 13 31 181 0.972972973 1.255272505 0.081081081 0.09375 0.216216216 32 0 1 36 2R:7382689-7382781 8 cos FBtr0089015|FBtr0336916 7382174|7382521 7383196|7383196 CTACTTAA 8mer-A1 dme-miR-1002-5p 2R - 7382712 7382778 3'utr cos FlyBase G15444.1 AAAGTAACTATCCTCATGAGATTCAACCGTAAAGACTTGACCTGCTACTTAAGATACTCGCAAGACA 23 7382737 0.749251079 11 21 129 0.891891892 1.51851394 0.216216216 0.52173913 0.702702703 23 4 0 33 2R:7382712-7382778 8 15 1721 FBgn0000352 545 14.08 21.54666667 0.027522936 1.065340909 0.696163366 28 3 15.5 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2R 7398051 7398056 - 2R_7398051_7398056_- 0.997523489 0.993576424 0.995549957 0.002791021 Eaf FBtr0089007 7396848 7398395 2R - 7398038 7398076 3'utr Eaf FlyBase G20378.1 GATTATGTAAAACTTGTTGGAAGACTAATAATATATCGC 15 7398059 0.803867266 4 13 112 0.875 1.146128036 0.125 0.066666667 0.125 15 2 0 14 2R:7398038-7398076 6 Eaf FBtr0089007 7396848 7398395 AAGACT 6mer3-8 dme-miR-14-3p 2R - 7398038 7398078 3'utr Eaf FlyBase G15457.1 ATGATTATGTAAAACTTGTTGGAAGACTAATAATATATCGC 14 7398059 0.822473815 2 14 111 1 1.255272505 0.166666667 0.285714286 0.444444444 14 0 0 18 2R:7398038-7398078 6 14.5 1722 FBgn0033166 365.6833333 12.62666667 19.28666667 0.039651793 1.148363252 0.751814725 3 3 3 0.1 dme-miR-283-5p 8mer-m1 TGATATTT 2R 7398319 7398326 - 2R_7398319_7398326_- 0.552782575 0.534008703 0.543395639 0.013275152 Eaf FBtr0089009|FBtr0089006|FBtr0089008|FBtr0089007 7398224|7398224|7398224|7396848 7398395|7398395|7398395|7398395 2R - 7398226 7398344 3'utr Eaf FlyBase G20379.1 AAGAGCAACAACAATTATTGATATTTTGTCTATATGCGTGTAATTAATTTGTAATTATTGAGAGGTGATTTTACTTGCTAGTGAAATTTTTTAAAATAAATTCTTATTTCTACACCACG 54 7398330 0.989776384 16 52 517 0.968253968 1.785329835 0.365079365 0.148148148 0.26984127 54 2 0 61 2R:7398226-7398344 8 Eaf FBtr0089008|FBtr0089007|FBtr0089009|FBtr0089006 7398224|7396848|7398224|7398224 7398395|7398395|7398395|7398395 TGATATTT 8mer-m1 dme-miR-283-5p 2R - 7398306 7398421 stop_codon Eaf FlyBase G15459.1 ATTCGTCCGACGATGACGACGACTAGCTGTTTAAAGTTTGATCTTATTTGCCTTCTTTTGACTAAACCAACGACAACAAGAGCAACAACAATTATTGATATTTTGTCTATATGCGT 66 7398329 0.97971807 13 64 588 0.978723404 1.963787827 0.234042553 0.333333333 0.531914894 66 2 0 92 2R:7398306-7398421 8 17.5 1723 FBgn0033166 365.6833333 12.62666667 19.28666667 0.047855613 1.385955649 0.907362599 4 3 3.5 0.1 dme-miR-1012-3p 8mer-A1 TTGACTAA 2R 7398357 7398364 - 2R_7398357_7398364_- 0.594752035 0.463917568 0.529334801 0.092513891 Eaf FBtr0089009|FBtr0089006|FBtr0089008|FBtr0089007 7398224|7398224|7398224|7396848 7398395|7398395|7398395|7398395 2R - 7398347 7398493 stop_codon Eaf FlyBase G20380.1 AGTCCGGCATTTATGCGTCCAATGGTGGCTTTCCAAACGATTTCCTACAAAACGATCTGCAGTTGTCGTCAAATTCGTCCGACGATGACGACGACTAGCTGTTTAAAGTTTGATCTTATTTGCCTTCTTTTGACTAAACCAACGACA 102 7398375 0.855002773 23 100 868 0.98245614 1.748188027 0.166666667 0.107843137 0.201754386 102 1 1 112 2R:7398347-7398493 8 Eaf FBtr0089008|FBtr0089007|FBtr0089009|FBtr0089006 7398224|7396848|7398224|7398224 7398395|7398395|7398395|7398395 TTGACTAA 8mer-A1 dme-miR-1012-3p 2R - 7398306 7398421 stop_codon Eaf FlyBase G15459.1 ATTCGTCCGACGATGACGACGACTAGCTGTTTAAAGTTTGATCTTATTTGCCTTCTTTTGACTAAACCAACGACAACAAGAGCAACAACAATTATTGATATTTTGTCTATATGCGT 66 7398383 0.97971807 13 64 588 0.978723404 1.963787827 0.234042553 0.333333333 0.531914894 66 2 0 92 2R:7398306-7398421 8 19 1724 FBgn0033166 365.6833333 12.62666667 19.28666667 0.051957522 1.504751848 0.985136536 11 19 15 0.1 dme-miR-252-5p 7mer-m8 GTACTTA 2R 7444798 7444804 - 2R_7444798_7444804_- 0.587980862 0.587933359 0.587957111 3.36E-05 kappaB-Ras FBtr0299801|FBtr0089002 7443822|7443822 7445025|7445025 2R - 7444781 7444879 5'utr kappaB-Ras FlyBase G20390.1 GTATTGATCCATTTAGAGTCTACTTGCCTTGTATTAACTGTTGTGCTTTAATGTGGGCCAGAGCCCAAGCCACTTGTACTTATGTCTCTTTGTGTGTGT 20 7444805 0.855629075 10 19 185 1 1.342422681 0.227272727 0.05 0.136363636 20 0 0 22 2R:7444781-7444879 7 kappaB-Ras FBtr0089002|FBtr0299801 7443822|7443822 7445025|7445025 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 7444792 7444845 5'utr kappaB-Ras FlyBase G15466.1 TAACTGTTGTGCTTTAATGTGGGCCAGAGCCCAAGCCACTTGTACTTATGTCTC 6 7444805 0.976794131 2 6 44 1 0.954242509 0.111111111 0.333333333 0.555555556 6 0 0 9 2R:7444792-7444845 7 6.5 1725 FBgn0040513 68.97 4.683333333 7.146666667 0.094243874 1.387900356 0.909514925 1 1 1 0.1 dme-miR-276a-3p 6mer2-7 GTTCCT 2R 7449262 7449267 + 2R_7449262_7449267_+ 0.632976715 0.53266858 0.582822647 0.070928538 CG11125 FBtr0336911|FBtr0088974 7449165|7449165 7449995|7449415 2R + 7449195 7449277 3'utr CG11125 FlyBase G13525.1 ATTAAAGCATTCCATCGACTGACTGACCGAGCGAGCTACTGGAATCTTGGATTTGCAAAACACGCGTGTTCCTTTCAACCATG 49 7449261 0.797983302 11 42 210 0.881355932 1.238882089 0.406779661 0.183673469 0.322033898 49 5 2 52 2R:7449195-7449277 6 CG11125 FBtr0088974|FBtr0336911 7449165|7449165 7449415|7449995 GTTCCT 6mer2-7 dme-miR-276a-3p 2R + 7449195 7449277 3'utr CG11125 FlyBase G10307.1 ATTAAAGCATTCCATCGACTGACTGACCGAGCGAGCTACTGGAATCTTGGATTTGCAAAACACGCGTGTTCCTTTCAACCATG 31 7449267 0.620719046 13 27 150 0.921568627 1.371067862 0.411764706 0.387096774 0.62745098 31 3 1 47 2R:7449195-7449277 6 9.5 1726 FBgn0033174 169.62 12.60333333 19.33 0.056007546 0.753768844 0.491464046 1 -5 -2 0.1 dme-miR-276a-3p 6mer2-7 GTTCCT 2R 7449815 7449820 + 2R_7449815_7449820_+ 0.633255694 0.899275937 0.766265815 0.188104687 CG11125 FBtr0336911 7449165 7449995 2R + 7449752 7449851 3'utr CG11125 FlyBase G13527.1 TCCATGTCGATGGGCATCAATTTGGCAACTGCAGTGCGAAAAACAATCGGATAAGACTTTGCTGTTCCTTTGCGAGCATGATACTCTGCCACTGATTATC 26 7449811 0.978629451 10 25 192 1 1.505149978 0.21875 0.153846154 0.3125 26 0 0 32 2R:7449752-7449851 6 CG11125 FBtr0336911 7449165 7449995 GTTCCT 6mer2-7 dme-miR-276a-3p 2R + 7449796 7449848 3'utr CG11125 FlyBase G10308.2 AATCGGATAAGACTTTGCTGTTCCTTTGCGAGCATGATACTCTGCCACTGATT 14 7449811 0.814440217 8 13 102 0.9375 1.176091259 0.1875 0.142857143 0.25 14 1 0 15 2R:7449796-7449848 6 13.5 1727 FBgn0033174 169.62 12.60333333 19.33 0.079589671 1.0711452 0.698396275 4 4 4 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 2R 7460305 7460310 - 2R_7460305_7460310_- 0.775148557 0.805247815 0.790198186 0.021283348 CG11141 FBtr0345799 7459683 7460659 2R - 7460269 7460327 3'utr CG11141 FlyBase G20409.1 AAGTGCAAACATTTCGTCCAAAGGGTGCCCCCCAGCAGGAAATGGATACGGACTGATAC 44 7460316 0.956144497 2 43 202 0.979591837 1.380211242 0.142857143 0.113636364 0.204081633 44 0 1 48 2R:7460269-7460327 6 CG11141 FBtr0345799 7459683 7460659 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 7460269 7460327 3'utr CG11141 FlyBase G15483.1 AAGTGCAAACATTTCGTCCAAAGGGTGCCCCCCAGCAGGAAATGGATACGGACTGATAC 25 7460316 0.958011438 3 24 115 0.972972973 1.255272505 0.135135135 0.32 0.540540541 25 0 1 36 2R:7460269-7460327 6 33.5 1728 FBgn0033177 665.0033333 30.53 46.47333333 0.050375687 1.097281363 0.720843494 6 6 6 0.1 dme-miR-2535b-3p 6mer3-8 CCGTGA 2R 7460541 7460546 - 2R_7460541_7460546_- 0.68012841 0.838416971 0.75927269 0.111926942 CG11141 FBtr0088999|FBtr0345799|FBtr0088998 7460429|7459683|7460429 7460659|7460659|7460659 2R - 7460514 7460603 3'utr CG11141 FlyBase G20411.2 ATTCTCTTTCTATGTTTCTATGTTTGCAAAAGTGTTGTGTTTATCAGATTGTGATCACCGTGATTTAGTTACTCTTTTTAGTGGAATTTA 664 7460539 0.949720983 25 649 5628 0.978391357 1.869764924 0.543817527 0.219879518 0.378151261 664 8 10 815 2R:7460514-7460603 6 CG11141 FBtr0088998|FBtr0345799|FBtr0088999 7460429|7459683|7460429 7460659|7460659|7460659 CCGTGA 6mer3-8 dme-miR-2535b-3p 2R - 7460516 7460717 stop_codon CG11141 FlyBase G15485.1 AACGCCAGCCACCAGTGACTCAAACACCTCCAGCGAGTGGGAGTTTTTGGACAACTAGTTCAGTATTAGAATTAAGTGCATACTCATTCGATTCCATTTGCATTTTTGCACTTTATTCTCTTTCTATGTTTCTATGTTTGCAAAAGTGTTGTGTTTATCAGATTGTGATCACCGTGATTTAGTTACTCTTTTTAGTGGAATT 712 7460539 0.98422822 37 693 5788 0.977653631 2.544068044 0.474860335 0.373595506 0.584729981 712 22 2 1050 2R:7460516-7460717 6 543 1729 FBgn0033177 665.0033333 30.53 46.47333333 0.81653726 17.78578447 11.68411993 -7 -7 -7 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 2R 7466920 7466925 - 2R_7466920_7466925_- 0.999200781 0.957179883 0.978190332 0.029713263 Aldh-III FBtr0310674|FBtr0310676|FBtr0088996|FBtr0310675|FBtr0300481|FBtr0300479|FBtr0300477|FBtr0300480|FBtr0088993|FBtr0300478|FBtr0336912|FBtr0308198 7466877|7466877|7466877|7466877|7466877|7466877|7466877|7466877|7466877|7466877|7466877|7466877 7467032|7467295|7467032|7467032|7467295|7467295|7467295|7467295|7467295|7467295|7467295|7467295 2R - 7466901 7466939 3'utr Aldh-III FlyBase G20434.1 GCTATTTAATACAAATGTGAATGCTGTAATGTAATGTAC 13 7466916 0.729045475 4 13 84 1 1.176091259 0.066666667 0.153846154 0.266666667 13 0 0 15 2R:7466901-7466939 6 Aldh-III FBtr0308198|FBtr0336912|FBtr0088993|FBtr0300477|FBtr0300479|FBtr0300481|FBtr0300478|FBtr0310675|FBtr0088996|FBtr0300480|FBtr0310676|FBtr0310674 7466877|7466877|7466877|7466877|7466877|7466877|7466877|7466877|7466877|7466877|7466877|7466877 7467295|7467295|7467295|7467295|7467295|7467295|7467295|7467032|7467032|7467295|7467295|7467032 ATGTGA 6mer3-8 dme-miR-1003-3p 2R - 7466903 7466936 3'utr Aldh-III FlyBase G15503.1 ATTTAATACAAATGTGAATGCTGTAATGTAATGT 20 7466916 0.7488042 4 20 134 1 1.579783597 0.026315789 0.5 0.736842105 20 0 0 38 2R:7466903-7466936 6 16.5 1730 FBgn0010548 1095.666667 59.85333333 91.78333333 0.015059325 0.275673869 0.1797712 -9 -9 -9 0.1 dme-miR-13b-2-5p 7mer-A1 TTGACGA 2R 7478960 7478966 - 2R_7478960_7478966_- 0.782911824 0.782911824 0.782911824 0 wech FBtr0300082 7478851 7483393 2R - 7478955 7478985 3'utr wech FlyBase G20448.1 AGCGTACATAGGTGTGGACTTGACGAGACAA 6 7478969 0.853788871 4 5 27 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2R:7478955-7478985 7 wech FBtr0300082 7478851 7483393 TTGACGA 7mer-A1 dme-miR-13b-2-5p 2R - 7478951 7479020 3'utr wech FlyBase G15509.1 TTATATACCCGAATATATATATATATATATATACAAGCGTACATAGGTGTGGACTTGACGAGACAAGAGT 9 7478971 0.971651016 5 9 57 1 1.079181246 0.083333333 0.222222222 0.416666667 9 0 0 12 2R:7478951-7479020 7 5.5 1731 FBgn0259745 2441.89 39.74 61.13333333 0.002252354 0.138399597 0.089967285 3 5 4 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 7479181 7479186 - 2R_7479181_7479186_- 0.999872554 0.999975808 0.999924181 7.30E-05 wech FBtr0300082 7478851 7483393 2R - 7479107 7479215 3'utr wech FlyBase G20449.1 AAGGCGATAAATCGAAGTCTAGGAAATCTACCAAATCAAGCGACGGATTCAATAACGAGTTGCAGTTTAAAATTGTAATTGTGTAGTAGTGGAAAGCGAGGAGGAGGTC 28 7479187 0.939193217 6 26 106 0.911764706 1.491361694 0.088235294 0.178571429 0.323529412 28 3 0 31 2R:7479107-7479215 6 wech FBtr0300082 7478851 7483393 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 7479147 7479201 3'utr wech FlyBase G15510.1 AAGTCTAGGAAATCTACCAAATCAAGCGACGGATTCAATAACGAGTTGCAGTTTA 21 7479187 0.928356051 4 18 67 0.9375 1.477121255 0.03125 0.476190476 0.65625 21 2 0 30 2R:7479147-7479201 6 20.5 1732 FBgn0259745 2441.89 39.74 61.13333333 0.008395137 0.515853045 0.335332606 1 1 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 7479460 7479465 - 2R_7479460_7479465_- 0.988479717 0.974046179 0.981262948 0.010206026 wech FBtr0300082 7478851 7483393 2R - 7479433 7479503 3'utr wech FlyBase G20451.2 ATATATATCTAGGGCAAATGATTACCAAATTACAAATTACCAAAATCCCTCCTAGCCCGCTAATCTAAATC 37 7479451 0.868507629 9 32 182 0.880952381 0.86923172 0 0.081081081 0.19047619 37 1 4 37 2R:7479433-7479503 6 wech FBtr0300082 7478851 7483393 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 7479436 7479500 3'utr wech FlyBase G15511.2 TATATCTAGGGCAAATGATTACCAAATTACAAATTACCAAAATCCCTCCTAGCCCGCTAATCTAA 27 7479451 0.750409282 8 26 126 0.953488372 1.135662602 0 0.481481481 0.674418605 27 0 2 41 2R:7479436-7479500 6 21 1733 FBgn0259745 2441.89 39.74 61.13333333 0.008599896 0.528434826 0.34351145 -14 -14 -14 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2R 7479545 7479551 - 2R_7479545_7479551_- 0.799697903 0.808818835 0.804258369 0.00644945 wech FBtr0300082|FBtr0300082 7478851|7478851 7483393|7483393 2R - 7479518 7479560 3'utr wech FlyBase G20452.1 ATACATAGTTACTTAACATAGACTAGCCTAGACTAGCCCGCAA 15 7479542 0.790306065 6 13 70 0.904761905 0.977723605 0 0.2 0.428571429 15 1 1 19 2R:7479518-7479560 7 wech FBtr0300082|FBtr0300082 7478851|7478851 7483393|7483393 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2R - 7479520 7479573 3'utr wech FlyBase G15512.1 AGTACATACATACATACATAGTTACTTAACATAGACTAGCCTAGACTAGCCCGC 10 7479542 0.805630545 5 8 53 0.866666667 0.636822098 0 0.3 0.533333333 10 0 2 13 2R:7479520-7479573 7 9.5 1734 FBgn0259745 2441.89 39.74 61.13333333 0.003890429 0.23905385 0.155398037 -9 -9 -9 0.1 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 7479805 7479812 - 2R_7479805_7479812_- 0.605651955 0.605652877 0.605652416 6.36E-07 wech FBtr0300082 7478851 7483393 2R - 7479677 7479854 3'utr wech FlyBase G20454.1 AAATACACGTACATAACATATGTAATAATTATGGAGCAATTGAGTACAAAACGAGTACAAATTTAAATTATAAGCCAGATCGGAGGACACACACGGACACACACCGCTTAAGTTAAACCATACACGGAGCAGTTGAAATATTGATAGGCCAGCTACTGGTTTCGCATAGCAAGTACAG 87 7479815 0.946764696 16 76 320 0.821428571 1.185636577 0.151785714 0.206896552 0.383928571 87 15 5 92 2R:7479677-7479854 8 wech FBtr0300082 7478851 7483393 AGTACAAA 8mer-A1 dme-miR-305-5p 2R - 7479668 7479830 3'utr wech FlyBase G15514.1 ATAATTATGGAGCAATTGAGTACAAAACGAGTACAAATTTAAATTATAAGCCAGATCGGAGGACACACACGGACACACACCGCTTAAGTTAAACCATACACGGAGCAGTTGAAATATTGATAGGCCAGCTACTGGTTTCGCATAGCAAGTACAGCATGTACTC 62 7479815 0.955929955 14 54 250 0.87755102 1.457377197 0.306122449 0.403225806 0.62244898 62 10 2 86 2R:7479668-7479830 8 56.5 1735 FBgn0259745 2441.89 39.74 61.13333333 0.023137815 1.421741319 0.924209378 3 3 3 0.1 dme-miR-970-3p 6mer3-8 TCTTAT 2R 7480160 7480165 - 2R_7480160_7480165_- 1 1 1 0 wech FBtr0300083|FBtr0300082 7480093|7478851 7483393|7483393 2R - 7480141 7480200 5'utr wech FlyBase G20456.1 AATCGATCGACGATGCTAAAGCAAACGGAATGAACTCTTATCAAAATACAATTTTGAGTA 63 7480163 0.775571462 6 62 314 0.985714286 1.838849091 0.057142857 0.111111111 0.2 63 1 0 69 2R:7480141-7480200 6 wech FBtr0300082|FBtr0300083 7478851|7480093 7483393|7483393 TCTTAT 6mer3-8 dme-miR-970-3p 2R - 7480139 7480196 5'utr wech FlyBase G15516.1 GATCGACGATGCTAAAGCAAACGGAATGAACTCTTATCAAAATACAATTTTGAGTAAT 43 7480164 0.951826613 5 41 195 0.963636364 1.72427587 0.2 0.23255814 0.4 43 2 0 53 2R:7480139-7480196 6 50 1736 FBgn0259745 2441.89 39.74 61.13333333 0.020475943 1.258178158 0.817884406 -2 -1 -1.5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 2R 7480674 7480679 - 2R_7480674_7480679_- 0.999997951 0.999998778 0.999998364 5.66E-07 wech FBtr0300083|FBtr0300082 7480093|7478851 7483393|7483393 2R - 7480671 7480727 5'utr wech FlyBase G20459.1 GTTAGACACAACCAATTACTACAAGTCATGAGGATACTGAACAATTTGCCAAAGGCT 7 7480682 0.946327776 5 7 32 1 1.041392685 0.363636364 0.285714286 0.545454545 7 0 0 11 2R:7480671-7480727 6 wech FBtr0300082|FBtr0300083 7478851|7480093 7483393|7483393 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 7480658 7480692 5'utr wech FlyBase G15518.1 ACTGAACAATTTGCCAAAGGCTAAGAATCAAAAGG 8 7480681 0.932466938 2 7 29 1 1.079181246 0.083333333 0.375 0.583333333 8 0 0 12 2R:7480658-7480692 6 5 1737 FBgn0259745 2441.89 39.74 61.13333333 0.002047594 0.125817816 0.081788441 3 2 2.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2R 7481165 7481170 - 2R_7481165_7481170_- 0.994742728 0.999999968 0.997371348 0.003717472 wech FBtr0300083|FBtr0300083|FBtr0300083|FBtr0300082|FBtr0300082|FBtr0300082 7480093|7480093|7480093|7478851|7478851|7478851 7483393|7483393|7483393|7483393|7483393|7483393 2R - 7481155 7481209 5'utr wech FlyBase G20462.1 TTTTATCCAATCGTACACCTTGAAGCGCCGTTCATTTCTTGTGATCCAGATCGAA 22 7481172 0.75689083 7 17 169 0.791666667 1.278753601 0.041666667 0.090909091 0.166666667 22 5 0 19 2R:7481155-7481209 6 wech FBtr0300082|FBtr0300082|FBtr0300082|FBtr0300083|FBtr0300083|FBtr0300083 7478851|7478851|7478851|7480093|7480093|7480093 7483393|7483393|7483393|7483393|7483393|7483393 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 7481149 7481205 5'utr wech FlyBase G15520.1 ATCCAATCGTACACCTTGAAGCGCCGTTCATTTCTTGTGATCCAGATCGAATCATTC 9 7481173 0.991900533 5 8 81 0.916666667 0.740362689 0.416666667 0.333333333 0.5 9 0 1 11 2R:7481149-7481205 6 7.5 1738 FBgn0259745 2441.89 39.74 61.13333333 0.003071391 0.188726724 0.122682661 2 3 2.5 0.1 dme-miR-317-3p 8mer-A1 TGTGTTCA 2R 7481615 7481622 - 2R_7481615_7481622_- 0.63113405 0.631134367 0.631134208 2.83E-07 wech FBtr0300083|FBtr0300082 7480093|7478851 7483393|7483393 2R - 7481576 7481640 5'utr wech FlyBase G20464.2 CGTTCTATTCTTTGTCCTTGTGTTCAAACCCGACTTCAACGGATCGACGGAGATGATGATACATA 48 7481623 0.895786489 5 45 423 0.948275862 1.439332694 0.103448276 0.104166667 0.25862069 48 2 1 55 2R:7481576-7481640 8 wech FBtr0300082|FBtr0300083 7478851|7480093 7483393|7483393 TGTGTTCA 8mer-A1 dme-miR-317-3p 2R - 7481602 7481634 5'utr wech FlyBase G15522.2 ATTCTTTGTCCTTGTGTTCAAACCCGACTTCAA 26 7481623 0.713993729 3 25 210 0.971428571 1.531478917 0.028571429 0.192307692 0.4 26 1 0 34 2R:7481602-7481634 8 33.5 1739 FBgn0259745 2441.89 39.74 61.13333333 0.013718882 0.842979366 0.547982552 1 1 1 0.1 dme-miR-276a-3p 6mer2-7 GTTCCT 2R 7481907 7481912 - 2R_7481907_7481912_- 0.999920865 0.999988978 0.999954922 4.82E-05 wech FBtr0300084|FBtr0300083|FBtr0300080|FBtr0300082 7481874|7480093|7481874|7478851 7483393|7483393|7483393|7483393 2R - 7481891 7481934 3'utr wech FlyBase G20466.1 TGAATACACATTTAGGTGACATGTTCCTCGCAAAAGAAACAAAT 14 7481913 0.974524855 6 14 84 1 1.230448921 0.058823529 0.214285714 0.352941176 14 0 0 17 2R:7481891-7481934 6 wech FBtr0300082|FBtr0300084|FBtr0300083|FBtr0300080 7478851|7481874|7480093|7481874 7483393|7483393|7483393|7483393 GTTCCT 6mer2-7 dme-miR-276a-3p 2R - 7481895 7481944 3'utr wech FlyBase G15525.1 AAGGGCGTATTGAATACACATTTAGGTGACATGTTCCTCGCAAAAGAAAC 15 7481911 0.971674006 6 12 71 0.869565217 0.823908741 0.260869565 0.4 0.608695652 15 1 2 20 2R:7481895-7481944 6 12.5 1740 FBgn0259745 2441.89 39.74 61.13333333 0.005118986 0.31454454 0.204471101 1 -1 0 0.1 dme-miR-317-3p 8mer-A1 TGTGTTCA 2R 7482009 7482016 - 2R_7482009_7482016_- 0.353466847 0.525602026 0.439534436 0.121717967 wech FBtr0300084|FBtr0300083|FBtr0300080|FBtr0300082 7481874|7480093|7481874|7478851 7483393|7483393|7483393|7483393 2R - 7481959 7482030 3'utr wech FlyBase G20467.1 AATTTTTGACTCAATGTGTTCATTAGCATTTAGTAGACTTAGCGGGCGTGGCATAGTGAAAACGTATGGAAA 318 7482016 0.988577787 19 264 3017 0.84 2.021189299 0.234666667 0.163522013 0.290666667 318 58 2 315 2R:7481959-7482030 8 wech FBtr0300082|FBtr0300084|FBtr0300083|FBtr0300080 7478851|7481874|7480093|7481874 7483393|7483393|7483393|7483393 TGTGTTCA 8mer-A1 dme-miR-317-3p 2R - 7481970 7482030 3'utr wech FlyBase G15526.1 AATTTTTGACTCAATGTGTTCATTAGCATTTAGTAGACTTAGCGGGCGTGGCATAGTGAAA 229 7482016 0.751177039 15 180 2176 0.775216138 2.42975228 0.293948127 0.366812227 0.582132565 229 78 0 269 2R:7481970-7482030 8 249.5 1741 FBgn0259745 2441.89 39.74 61.13333333 0.102174955 6.278309009 4.081243184 0 0 0 0.1 dme-miR-14-3p 8mer-A1 AAGACTGA 2R 7482500 7482507 - 2R_7482500_7482507_- 0.643565469 0.643565469 0.643565469 0 wech FBtr0300084|FBtr0300083|FBtr0300080|FBtr0300082 7481874|7480093|7481874|7478851 7483393|7483393|7483393|7483393 2R - 7482445 7482554 3'utr wech FlyBase G20470.1 AAGAAAATATTGATGGAACCCGCTGACTTTTCGTTGAACTTTATACAAAGACTGATTAACTAAACCGCAATTTCGGAGCCAACTAAAGAACCATATATGGTGAGGCCAAA 241 7482499 0.829855746 19 219 1605 0.902356902 1.826074803 0.215488215 0.174273859 0.32996633 241 26 3 268 2R:7482445-7482554 8 wech FBtr0300082|FBtr0300084|FBtr0300083|FBtr0300080 7478851|7481874|7480093|7481874 7483393|7483393|7483393|7483393 AAGACTGA 8mer-A1 dme-miR-14-3p 2R - 7482280 7482554 3'utr wech FlyBase G15529.1 AAGAAAATATTGATGGAACCCGCTGACTTTTCGTTGAACTTTATACAAAGACTGATTAACTAAACCGCAATTTCGGAGCCAACTAAAGAACCATATATGGTGAGGCCAAAATAAGTGAAAGAGCAACACACTCAAATTGCAATGACATTGATAACGTAAAGTAACTTAACATAGCTTAACATACATACTTTCGCGCATATAGAGCGATACAGATATCATATAGATCCGATCATCCAGTCACGAATCATCATGGGCATAGCTGAAACCGAGTTTAA 229 7482499 0.978696172 34 217 1466 0.946629213 2.226599905 0.306179775 0.366812227 0.592696629 229 18 1 337 2R:7482280-7482554 8 165.5 1742 FBgn0259745 2441.89 39.74 61.13333333 0.067775371 4.164569703 2.707197383 -8 -8 -8 0.1 dme-miR-14-3p 7mer-A1 AGACTGA 2R 7482624 7482630 - 2R_7482624_7482630_- 0.823349141 0.823349242 0.823349191 7.07E-08 wech FBtr0300084|FBtr0300083|FBtr0300080|FBtr0300082 7481874|7480093|7481874|7478851 7483393|7483393|7483393|7483393 2R - 7482588 7482672 3'utr wech FlyBase G20471.1 TTTGGGACATACATATGTATTTTAATGATTTCCTTATAATTGAGACTGAGCATTTGACAACACGAACTTTGCGTGTACGGAAGCA 374 7482632 0.814231969 12 366 2667 0.980477223 2.354108439 0.106290672 0.200534759 0.351409978 374 8 1 452 2R:7482588-7482672 7 wech FBtr0300082|FBtr0300084|FBtr0300083|FBtr0300080 7478851|7481874|7480093|7481874 7483393|7483393|7483393|7483393 AGACTGA 7mer-A1 dme-miR-14-3p 2R - 7482582 7482652 3'utr wech FlyBase G15530.1 TTTAATGATTTCCTTATAATTGAGACTGAGCATTTGACAACACGAACTTTGCGTGTACGGAAGCAAAGCGA 270 7482632 0.977139938 16 257 1794 0.956632653 2.273001272 0.091836735 0.344444444 0.548469388 270 16 1 375 2R:7482582-7482652 7 308 1743 FBgn0259745 2441.89 39.74 61.13333333 0.126131808 7.750377453 5.038167939 2 2 2 0.1 dme-miR-14-3p 7mer-A1 AGACTGA 2R 7482892 7482898 - 2R_7482892_7482898_- 0.82138946 0.822527393 0.821958427 0.000804617 wech FBtr0300084|FBtr0300083|FBtr0300080|FBtr0300082 7481874|7480093|7481874|7478851 7483393|7483393|7483393|7483393 2R - 7482830 7483090 3'utr wech FlyBase G20473.1 AACTAGAACTATAACTAAAACAAAAACAAAAAACAAAAACTAAAGCGAAAGGCAGGCGGTTGAGTAGGATTTAGGAGATATATATAAACGTAGGGTCCGTGAGCATTCAGTAGAGTTACCGAACCTAGTAAAAGATAATGCAAAGAGGGAACTCAACCATTTACTAGATGAAAATATTATTACCTGTTAGTTAGACTGAAAGGCAGTTTGCTAGCTGATAGAAGGAGGTACGAACCAGGTCAGGTGGCGATTGTGTTTTTT 261 7482900 0.977157368 33 247 1617 0.952830189 1.782472624 0.116352201 0.195402299 0.339622642 261 11 4 303 2R:7482830-7483090 7 wech FBtr0300082|FBtr0300084|FBtr0300083|FBtr0300080 7478851|7481874|7480093|7481874 7483393|7483393|7483393|7483393 AGACTGA 7mer-A1 dme-miR-14-3p 2R - 7482857 7482922 3'utr wech FlyBase G15533.1 TGAAAATATTATTACCTGTTAGTTAGACTGAAAGGCAGTTTGCTAGCTGATAGAAGGAGGTACGAA 129 7482900 0.70257958 13 124 775 0.959390863 1.975431809 0.091370558 0.372093023 0.588832487 129 7 1 189 2R:7482857-7482922 7 147.5 1744 FBgn0259745 2441.89 39.74 61.13333333 0.060404031 3.711625566 2.412758997 2 2 2 0.1 dme-miR-283-5p 6mer2-7 GATATT 2R 7483211 7483216 - 2R_7483211_7483216_- 0.97421347 0.980849342 0.977531406 0.004692219 wech FBtr0300081|FBtr0300084|FBtr0300083|FBtr0300080|FBtr0300082 7483154|7481874|7480093|7481874|7478851 7483393|7483393|7483393|7483393|7483393 2R - 7483169 7483352 3'utr wech FlyBase G20474.1 AAGAGCGAAACCTTAGCGTAGAGTTTCAAATAACATGACGATTATGAGGAGGTGCCGAAACCGATTTAATAAGAAAAAATCTGAAATCATGAAAGTTAGCGAAAATTTTTAGCTTAAGTGCTACAACGATTACCTCGATATTGCTTAAGAGTTATGGTTACGATTTGGTAATTTACAATACAAT 286 7483223 0.983408018 27 267 2054 0.932748538 1.503790683 0.134502924 0.157342657 0.295321637 286 14 9 319 2R:7483169-7483352 6 wech FBtr0300082|FBtr0300081|FBtr0300084|FBtr0300083|FBtr0300080 7478851|7483154|7481874|7480093|7481874 7483393|7483393|7483393|7483393|7483393 GATATT 6mer2-7 dme-miR-283-5p 2R - 7483200 7483317 3'utr wech FlyBase G15534.2 TGACGATTATGAGGAGGTGCCGAAACCGATTTAATAAGAAAAAATCTGAAATCATGAAAGTTAGCGAAAATTTTTAGCTTAAGTGCTACAACGATTACCTCGATATTGCTTAAGAGTT 189 7483223 0.831774575 21 173 1221 0.924092409 1.405765346 0.194719472 0.428571429 0.643564356 189 13 10 280 2R:7483200-7483317 6 180 1745 FBgn0259745 2441.89 39.74 61.13333333 0.073713394 4.529441369 2.94438386 7 7 7 0.1 dme-miR-8-3p 7mer-m8 CAGTATT 2R 7490928 7490934 - 2R_7490928_7490934_- 0.661140895 0.66112149 0.661131192 1.37E-05 Coop FBtr0329876|FBtr0088984 7490834|7490834 7491048|7491048 2R - 7490844 7491014 3'utr Coop FlyBase G20494.1 ACTTTATAAGCCTAGCTTACAGTATTATAAGAACGCGACTGACTAACTCTGTGAATCTGCCTACATACGTAGCATGTAATCAGTATTCCGGCCTGCTTTCCTTCATACCAACACACTTCAATACATACCATATTGCATTACAATACATATTTACACTTCAAATAGACGATC 1332 7490929 0.986804976 28 1307 11306 0.982524272 2.227029262 0.150161812 0.13963964 0.258252427 1332 19 8 1518 2R:7490844-7491014 7 Coop FBtr0329876|FBtr0088984 7490834|7490834 7491048|7491048 CAGTATT 7mer-m8 dme-miR-8-3p 2R - 7490899 7491015 3'utr Coop FlyBase G15552.1 TACTTTATAAGCCTAGCTTACAGTATTATAAGAACGCGACTGACTAACTCTGTGAATCTGCCTACATACGTAGCATGTAATCAGTATTCCGGCCTGCTTTCCTTCATACCAACACAC 1000 7490929 0.820737119 23 966 8069 0.973614776 2.390935107 0.132585752 0.363 0.579815303 1000 35 5 1476 2R:7490899-7491015 7 911 1746 FBgn0263240 183.6266667 15.05666667 22.94666667 4.961153064 60.5047598 39.70075537 -5 -5 -5 0.1 dme-miR-995-5p 6mer2-7 ATTCGG 2R 7494305 7494310 - 2R_7494305_7494310_- 1 0.990479653 0.995239827 0.006731869 CG1620 FBtr0300830|FBtr0088983|FBtr0336918 7494010|7493804|7494010 7494823|7494368|7494368 2R - 7494258 7494324 3'utr CG1620 FlyBase G20509.2 CGCAGGCGCTTTCGATTCGGTTGGGCCAGGCGATGTATTTGCAGGGCGCTTCATTACCATTACCACT 12 7494313 0.974366823 8 11 63 0.866666667 1.113943352 0.133333333 0.25 0.4 12 2 0 13 2R:7494258-7494324 6 CG1620 FBtr0336918|FBtr0300830|FBtr0088983 7494010|7494010|7493804 7494368|7494823|7494368 ATTCGG 6mer2-7 dme-miR-995-5p 2R - 7494276 7494313 3'utr CG1620 FlyBase G15560.1 TCGATTCGGTTGGGCCAGGCGATGTATTTGCAGGGCGC 7 7494285 0.858498218 4 7 30 1 0.903089987 0.375 0.142857143 0.25 7 0 0 8 2R:7494276-7494313 6 5.5 1747 FBgn0033183 539.2866667 29.41333333 45.03 0.010198657 0.186990027 0.122140795 3 -25 -11 0.1 dme-miR-1007-3p 6mer2-7 GAGCTT 2R 7494721 7494726 - 2R_7494721_7494726_- 0.925026161 0.914032114 0.919529137 0.007774003 CG1620 FBtr0300830 7494010 7494823 2R - 7494700 7494752 3'utr CG1620 FlyBase G20512.1 TGGAAGAAGAGTGAGCGCCGGGATCAGAGCTTTGCTTTAAACGACACCATCGA 8 7494721 0.960619817 4 8 41 1 0.903089987 0.375 0 0 8 0 0 8 2R:7494700-7494752 6 CG1620 FBtr0300830 7494010 7494823 GAGCTT 6mer2-7 dme-miR-1007-3p 2R - 7494702 7494747 3'utr CG1620 FlyBase G15563.1 GAAGAGTGAGCGCCGGGATCAGAGCTTTGCTTTAAACGACACCATC 14 7494721 0.700856862 5 14 78 1 1.361727836 0.347826087 0.5 0.695652174 14 0 0 23 2R:7494702-7494747 6 10.5 1748 FBgn0033183 539.2866667 29.41333333 45.03 0.019470164 0.356980961 0.233177881 -5 -5 -5 0.1 dme-bantam-3p 6mer3-8 TGATCT 2R 7507528 7507533 + 2R_7507528_7507533_+ 0.975405231 0.979622253 0.977513742 0.00298194 didum FBtr0089744 7505871 7508237 2R + 7507510 7507563 3'utr didum FlyBase G13547.1 GGATGTTCAGACCATTTGTGATCTGTGTACTTCTCTGAGCACGGCGCAGGTCCT 16 7507525 0.987291717 5 16 144 1 1.204119983 0.25 0 0 16 0 0 16 2R:7507510-7507563 6 didum FBtr0089744 7505871 7508237 TGATCT 6mer3-8 dme-bantam-3p 2R + 7507513 7507562 3'utr didum FlyBase G10321.1 TGTTCAGACCATTTGTGATCTGTGTACTTCTCTGAGCACGGCGCAGGTCC 7 7507533 0.981461847 3 5 42 0.888888889 0.903089987 0.111111111 0.142857143 0.333333333 7 1 0 8 2R:7507513-7507562 6 10 1749 FBgn0261397 963.6266667 18.58333333 28.54333333 0.010377463 0.538116592 0.350344505 3 -5 -1 0.1 dme-miR-34-5p 6mer3-8 CACTGC 2R 7507914 7507919 + 2R_7507914_7507919_+ 0.999731793 1 0.999865897 0.000189646 didum FBtr0089743|FBtr0089745|FBtr0089744 7507857|7507857|7505871 7508237|7508625|7508237 2R + 7507856 7507927 stop_codon didum FlyBase G13548.1 TAAACGTCGCGTGCCTGCGTCTTGCCGGTCGAGAACTTTGCCATTTTGGATGACATTACACTGCTTAGTTTT 13 7507912 0.932591288 7 12 92 0.933333333 1.146128036 0.133333333 0.153846154 0.266666667 13 1 0 14 2R:7507856-7507927 6 didum FBtr0089744|FBtr0089745|FBtr0089743 7505871|7507857|7507857 7508237|7508625|7508237 CACTGC 6mer3-8 dme-miR-34-5p 2R + 7507865 7507927 3'utr didum FlyBase G10322.1 CGTGCCTGCGTCTTGCCGGTCGAGAACTTTGCCATTTTGGATGACATTACACTGCTTAGTTTT 6 7507912 0.990134796 5 5 45 1 1.113943352 0.153846154 0.666666667 0.846153846 6 0 0 13 2R:7507865-7507927 6 5 1750 FBgn0261397 963.6266667 18.58333333 28.54333333 0.005188731 0.269058296 0.175172253 2 2 2 0.1 dme-miR-79-3p 6mer3-8 TAGCTT 2R 7508048 7508053 + 2R_7508048_7508053_+ 0.942271881 0.99954043 0.970906155 0.040494945 didum FBtr0089743|FBtr0089745|FBtr0089744 7507857|7507857|7505871 7508237|7508625|7508237 2R + 7508010 7508066 3'utr didum FlyBase G13549.1 TAGAGCCGTTTTGCCGAAATGTTTGTGTAGTTCCTGTTTAGCTTAAATACCCGTTGT 16 7508047 0.991882828 8 14 156 0.944444444 1.230448921 0.111111111 0.0625 0.166666667 16 1 0 17 2R:7508010-7508066 6 didum FBtr0089744|FBtr0089745|FBtr0089743 7505871|7507857|7507857 7508237|7508625|7508237 TAGCTT 6mer3-8 dme-miR-79-3p 2R + 7508026 7508066 3'utr didum FlyBase G10323.1 AAATGTTTGTGTAGTTCCTGTTTAGCTTAAATACCCGTTGT 16 7508047 0.728151613 6 16 178 1 1.491361694 0.032258065 0.6875 0.838709677 16 0 0 31 2R:7508026-7508066 6 15 1751 FBgn0261397 963.6266667 18.58333333 28.54333333 0.015566194 0.807174888 0.525516758 1 1 1 0.1 dme-miR-283-5p 8mer-A1 TGATATTA 2R 7580650 7580657 + 2R_7580650_7580657_+ 0.592190862 0.592192283 0.592191573 9.90E-07 Vps13 FBtr0088910|FBtr0310024 7580470|7580470 7580675|7580675 2R + 7580614 7580664 3'utr Vps13 FlyBase G13600.1 ATGTCGCACTTTTACGTATGTTAACAACCATGGTTTTGATATTAAAATTTT 10 7580648 0.98854002 5 10 95 1 1 0.1 0 0 10 0 0 10 2R:7580614-7580664 8 Vps13 FBtr0310024|FBtr0088910 7580470|7580470 7580675|7580675 TGATATTA 8mer-A1 dme-miR-283-5p 2R + 7580627 7580661 3'utr Vps13 FlyBase G10359.1 ACGTATGTTAACAACCATGGTTTTGATATTAAAAT 8 7580648 0.693611658 5 8 68 1 1.278753601 0 0.75 0.894736842 8 0 0 19 2R:7580627-7580661 8 8 1752 FBgn0033194 1638.743333 18.93 29.02666667 0.00488179 0.422609614 0.275608636 2 2 2 0.1 dme-miR-965-3p 6mer3-8 TACGCT 2R 7595963 7595968 - 2R_7595963_7595968_- 0.999999971 0.989691015 0.994845493 0.007289564 CG1358 FBtr0088949|FBtr0088950|FBtr0303287|FBtr0088948 7595733|7595733|7595263|7595733 7596539|7596539|7596539|7596539 2R - 7595924 7595996 3'utr CG1358 FlyBase G20612.1 AGCGAATGCCGAATTACCAAACAGTAGCTACGCTGCTCTCGCCTTCGATTGATGTTCCCCCCTCCTTCCGCCT 9 7595946 0.977912721 6 8 51 0.9 0.954242509 0 0.111111111 0.2 9 1 0 9 2R:7595924-7595996 6 CG1358 FBtr0303287|FBtr0088948|FBtr0088949|FBtr0088950 7595263|7595733|7595733|7595733 7596539|7596539|7596539|7596539 TACGCT 6mer3-8 dme-miR-965-3p 2R - 7595926 7595978 3'utr CG1358 FlyBase G15639.1 AAACAGTAGCTACGCTGCTCTCGCCTTCGATTGATGTTCCCCCCTCCTTCCGC 6 7595963 0.954804687 3 6 31 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2R:7595926-7595978 6 4.5 1753 FBgn0033196 1712.173333 72.37333333 112.08 0.002628239 0.062177598 0.040149893 -22 -5 -13.5 0.1 dme-miR-190-5p 8mer-m1 ACATATCT 2R 7651658 7651665 - 2R_7651658_7651665_- 0.577627545 0.57762604 0.577626792 1.06E-06 CG17985 FBtr0088946 7651623 7652111 2R - 7651640 7651700 3'utr CG17985 FlyBase G20626.1 GGGATAGTTTCTCTTACGCCAAAAAAGTACGTAATACATATCTTAGAGCTAAATAAATAGT 11 7651658 0.981616119 5 10 68 0.916666667 1.041392685 0.25 0.090909091 0.166666667 11 1 0 11 2R:7651640-7651700 8 CG17985 FBtr0088946 7651623 7652111 ACATATCT 8mer-m1 dme-miR-190-5p 2R - 7651648 7651677 3'utr CG17985 FlyBase G15651.1 AAAGTACGTAATACATATCTTAGAGCTAAA 6 7651658 0.766135231 2 5 31 1 0.954242509 0.222222222 0.333333333 0.555555556 6 0 0 9 2R:7651648-7651677 8 6.5 1754 FBgn0033199 98.75333333 8.186666667 12.54333333 0.065820563 0.793973941 0.518203561 -7 -7 -7 0.1 dme-miR-1008-3p 7mer-A1 GCTGTGA 2R 7651813 7651819 - 2R_7651813_7651819_- 0.814850207 0.820232875 0.817541541 0.003806144 CG17985 FBtr0088946 7651623 7652111 2R - 7651798 7651846 3'utr CG17985 FlyBase G20627.1 AATTGCAGGATTCTAAGATCCGATTGTGCTGTGAATATAAATCGTAACC 15 7651822 0.975540418 3 15 116 1 1.230448921 0.117647059 0.133333333 0.235294118 15 0 0 17 2R:7651798-7651846 7 CG17985 FBtr0088946 7651623 7652111 GCTGTGA 7mer-A1 dme-miR-1008-3p 2R - 7651805 7651832 3'utr CG17985 FlyBase G15652.1 AAGATCCGATTGTGCTGTGAATATAAAT 13 7651822 0.719316456 2 11 79 1 1.361727836 0.130434783 0.615384615 0.782608696 13 0 0 23 2R:7651805-7651832 7 14 1755 FBgn0033199 98.75333333 8.186666667 12.54333333 0.141767367 1.71009772 1.116130747 3 3 3 0.1 dme-miR-970-3p 6mer2-7 CTTATG 2R 7667359 7667364 - 2R_7667359_7667364_- 0.999999997 1 0.999999998 0 CG12042 FBtr0088944 7667246 7667400 2R - 7667312 7667410 stop_codon CG12042 FlyBase G20642.1 AGCCAACTAAACTGGAAACTTATTAGCCAACAGGCGTACTAATCGACTTATGCGAAATATGAAATATGCTTTATGAAAGCTAGAGAAATATGTATTTAT 23 7667368 0.970218556 10 22 126 0.965517241 1.447158031 0.034482759 0.173913043 0.344827586 23 1 0 28 2R:7667312-7667410 6 CG12042 FBtr0088944 7667246 7667400 CTTATG 6mer2-7 dme-miR-970-3p 2R - 7667327 7667386 3'utr CG12042 FlyBase G15662.1 AGCCAACAGGCGTACTAATCGACTTATGCGAAATATGAAATATGCTTTATGAAAGCTAGA 8 7667368 0.957780341 5 8 44 1 1.079181246 0.083333333 0.375 0.583333333 8 0 0 12 2R:7667327-7667386 6 9 1756 FBgn0033206 185.4566667 12.72666667 19.49666667 0.048528857 0.707176532 0.46161737 4 4 4 0.1 dme-miR-968-5p 6mer2-7 CTACTT 2R 7677926 7677931 - 2R_7677926_7677931_- 0.925173253 0.989430474 0.957301863 0.045436702 CG1399 FBtr0088939|FBtr0300779|FBtr0088940 7677068|7677068|7677068 7677991|7677991|7677991 2R - 7677820 7677949 3'utr CG1399 FlyBase G20659.1 GCGATCAAAATTGGCTGGCTACTTCGCTTGGTTGATTTCGGTGCTCATCCTGTGCGTCTAACATTCGCATTTGCTGCATAGTGTGTATTCCTTAAGTTGTGTCGTATTAGCCAGTATGCCGCATTTTGCC 39 7677938 0.989672158 18 32 313 0.829787234 1.290034611 0.276595745 0.179487179 0.319148936 39 7 1 39 2R:7677820-7677949 6 CG1399 FBtr0088940|FBtr0300779|FBtr0088939 7677068|7677068|7677068 7677991|7677991|7677991 CTACTT 6mer2-7 dme-miR-968-5p 2R - 7677894 7677949 3'utr CG1399 FlyBase G15672.1 GCGATCAAAATTGGCTGGCTACTTCGCTTGGTTGATTTCGGTGCTCATCCTGTGCG 15 7677938 0.990804419 6 11 112 0.739130435 0.929418926 0.47826087 0.333333333 0.565217391 15 5 1 17 2R:7677894-7677949 6 16.5 1757 FBgn0033212 606.67 12.77333333 19.57 0.027197653 1.291753653 0.843127236 7 7 7 0.1 dme-miR-304-5p 7mer-A1 GAGATTA 2R 7716941 7716947 - 2R_7716941_7716947_- 0.822326369 0.823236376 0.822781373 0.000643467 CG18812 FBtr0088936 7716805 7719261 2R - 7716921 7716957 3'utr CG18812 FlyBase G20693.1 AATCGGAAACGAGATTAAGAATGATCGTCGTGGCACA 16 7716943 0.951843383 3 16 73 1 1.278753601 0.473684211 0.1875 0.315789474 16 0 0 19 2R:7716921-7716957 7 CG18812 FBtr0088936 7716805 7719261 GAGATTA 7mer-A1 dme-miR-304-5p 2R - 7716917 7716961 3'utr CG18812 FlyBase G15695.1 GTTAAATCGGAAACGAGATTAAGAATGATCGTCGTGGCACAAAAT 8 7716943 0.837867048 3 8 41 1 1.146128036 0.357142857 0.625 0.785714286 8 0 0 14 2R:7716917-7716961 7 12 1758 FBgn0042135 915.0533333 42.71666667 65.20333333 0.01311399 0.280920796 0.184039671 -4 -4 -4 0.1 dme-miR-252-5p 6mer3-8 GTACTT 2R 7718684 7718689 - 2R_7718684_7718689_- 0.999999803 0.999999996 0.999999899 1.41E-07 CG18812 FBtr0330328|FBtr0306239|FBtr0330327|FBtr0088935|FBtr0088937|FBtr0088936 7718444|7718444|7718277|7718444|7718277|7716805 7719261|7719261|7719237|7719261|7719261|7719261 2R - 7718661 7718783 5'utr CG18812 FlyBase G20697.1 AACGTTAGCAATGCTGAAGAAAATAAAATTTGATTAGAGACCCTGCATGTACCGGATATACACAAGATTATTCTAAATATGAAATTGATAAATTGTACTTGATACTTGATTACTGAAGGGAGA 33 7718690 0.97787248 10 33 221 1 1.556302501 0.194444444 0.060606061 0.138888889 33 0 0 36 2R:7718661-7718783 6 CG18812 FBtr0306239|FBtr0330328|FBtr0088936|FBtr0088937|FBtr0088935|FBtr0330327 7718444|7718444|7716805|7718277|7718444|7718277 7719261|7719261|7719261|7719261|7719261|7719237 GTACTT 6mer3-8 dme-miR-252-5p 2R - 7718583 7718698 5'utr CG18812 FlyBase G15697.1 TGATAAATTGTACTTGATACTTGATTACTGAAGGGAGACAGACGTATATATGAATAAGTATACATATTGTTAGTTATCTTTGCAATTACAAATTGTATTATTAATGTATTAATACT 13 7718690 0.987002199 8 13 120 1 1.322219295 0.142857143 0.461538462 0.666666667 13 0 0 21 2R:7718583-7718698 6 12 1759 FBgn0042135 915.0533333 42.71666667 65.20333333 0.01311399 0.280920796 0.184039671 1 1 1 0.1 dme-miR-31a-5p 6mer3-8 TCTTGC 2R 7737111 7737116 - 2R_7737111_7737116_- 0.999990823 0.999961221 0.999976022 2.09E-05 CG30497 FBtr0331966 7737017 7740276 2R - 7737072 7737167 3'utr CG30497 FlyBase G20712.1 CTATATCTATACCATATACAACAATTACCATACATATTACTTCTGTGCGCTTCTTGCGATCTAAGGAATTTCAATAAAAACAAACAAAAATACCTA 74 7737114 0.987474166 16 72 637 0.97752809 1.939519253 0.078651685 0.175675676 0.314606742 74 2 0 87 2R:7737072-7737167 6 CG30497 FBtr0331966 7737017 7740276 TCTTGC 6mer3-8 dme-miR-31a-5p 2R - 7737052 7737167 3'utr CG30497 FlyBase G15707.1 CTATATCTATACCATATACAACAATTACCATACATATTACTTCTGTGCGCTTCTTGCGATCTAAGGAATTTCAATAAAAACAAACAAAAATACCTAAAAAGTATAAAACCGACGAA 57 7737114 0.941554859 15 53 447 0.962962963 1.892094603 0.111111111 0.315789474 0.518518519 57 3 0 78 2R:7737052-7737167 6 54.5 1760 FBgn0050497 2910.163333 68.06 105.1533333 0.018727471 0.800764032 0.51829075 -2 -2 -2 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 2R 7737616 7737621 - 2R_7737616_7737621_- 0.999999971 0.999999997 0.999999984 0 CG30497 FBtr0331966 7737017 7740276 2R - 7737604 7737734 3'utr CG30497 FlyBase G20714.1 AGGACGATCATCTGAATTGATCTGATTTGTCGGAATTCTTTGGTTTTGCCAGCTGCAATGAAGAGGTTTATTTCATGTTTGGGTCCCATAGCTAATGCCTGGGCTGGGCGGATTGTGTTTTTACATACAAT 48 7737622 0.82279337 18 44 389 0.945454545 1.716003344 0.181818182 0.145833333 0.254545455 48 3 0 52 2R:7737604-7737734 6 CG30497 FBtr0331966 7737017 7740276 TGTGTT 6mer3-8 dme-miR-317-3p 2R - 7737604 7737654 3'utr CG30497 FlyBase G15711.1 GGGTCCCATAGCTAATGCCTGGGCTGGGCGGATTGTGTTTTTACATACAAT 22 7737622 0.749093456 6 22 183 1 1.447158031 0.321428571 0.227272727 0.392857143 22 0 0 28 2R:7737604-7737654 6 22.5 1761 FBgn0050497 2910.163333 68.06 105.1533333 0.007731525 0.330590655 0.213973245 1 1 1 0.1 dme-miR-283-5p 6mer3-8 TGATAT 2R 7738414 7738419 - 2R_7738414_7738419_- 0.998721599 0.81778895 0.908255275 0.127938668 CG30497 FBtr0331966|FBtr0088933|FBtr0088934 7737017|7737766|7737766 7740276|7740276|7740276 2R - 7738381 7738519 3'utr CG30497 FlyBase G20718.1 ATTTTCGGTGTGTCCTGACAACAGCAACATATTATGTTATGTAGGTATGTGAATGATTGATTGAGTGTATTGTTAAAACCAGCTGGTGATAATTAATGAATGATATAGACATGATATAGATATGCTCTAGACAACAAAT 125 7738414 0.846072919 23 119 843 0.960526316 1.86332286 0.243421053 0.2 0.342105263 125 5 1 146 2R:7738381-7738519 6 CG30497 FBtr0088934|FBtr0088933|FBtr0331966 7737766|7737766|7737017 7740276|7740276|7740276 TGATAT 6mer3-8 dme-miR-283-5p 2R - 7738391 7738553 3'utr CG30497 FlyBase G15715.1 AATGTGTAGAACGAAATGTCATATTTTGTAGAATATTTTCGGTGTGTCCTGACAACAGCAACATATTATGTTATGTAGGTATGTGAATGATTGATTGAGTGTATTGTTAAAACCAGCTGGTGATAATTAATGAATGATATAGACATGATATAGATATGCTCTA 75 7738414 0.97853577 21 73 495 0.974576271 1.583576586 0.279661017 0.426666667 0.63559322 75 1 2 115 2R:7738391-7738553 6 50.5 1762 FBgn0050497 2910.163333 68.06 105.1533333 0.017352978 0.74199236 0.480251062 -5 -5 -5 0.1 dme-miR-184-5p 6mer3-8 TGATAA 2R 7738719 7738724 - 2R_7738719_7738724_- 0.99999994 0.999999923 0.999999931 0 CG30497 FBtr0331966|FBtr0088933|FBtr0088934 7737017|7737766|7737766 7740276|7740276|7740276 2R - 7738555 7738790 3'utr CG30497 FlyBase G20719.1 AGACGAAGGCGGCGTTTTGGGTTCCAGTCTAGAAATTCCAAGCAACAATCTAATTGCAGGCTGAAATGATAATTTAAAGCGATGATATGTAAATATTAGTCAAATTAATATGTGGACGAGGATTCGGAAGTGTAGAGGATTTATATATATATATATATATATGTGTCTGGTGTACCAGAAGTTGCTCAATGAAATTCAATCCACAAAGCAAAGTTAAACCGAAATAAATTTTAAAG 119 7738724 0.976392336 32 112 723 0.932885906 1.540954809 0.201342282 0.159663866 0.32885906 119 7 3 139 2R:7738555-7738790 6 CG30497 FBtr0088934|FBtr0088933|FBtr0331966 7737766|7737766|7737017 7740276|7740276|7740276 TGATAA 6mer3-8 dme-miR-184-5p 2R - 7738647 7738784 3'utr CG30497 FlyBase G15716.2 AGGCGGCGTTTTGGGTTCCAGTCTAGAAATTCCAAGCAACAATCTAATTGCAGGCTGAAATGATAATTTAAAGCGATGATATGTAAATATTAGTCAAATTAATATGTGGACGAGGATTCGGAAGTGTAGAGGATTTAT 64 7738724 0.848749464 15 62 371 0.978723404 1.963787827 0.063829787 0.34375 0.553191489 64 2 0 92 2R:7738647-7738784 6 51 1763 FBgn0050497 2910.163333 68.06 105.1533333 0.01752479 0.749338819 0.485006023 0 0 0 0.1 dme-miR-14-3p 7mer-A1 AGACTGA 2R 7739315 7739321 - 2R_7739315_7739321_- 0.818097501 0.823349434 0.820723467 0.003713654 CG30497 FBtr0088932|FBtr0331966|FBtr0088933|FBtr0088934 7739112|7737017|7737766|7737766 7740276|7740276|7740276|7740276 2R - 7739275 7739445 3'utr CG30497 FlyBase G20721.1 ATTTCACTGTTCCTTTTCTATATCTCTAATTGAATGTGTCCGGCGACTTGAAAGCCTTTCCACGACACTTGGCACACACGCGCTCCTACTTTAATAATGTAACTATCCCGAGAGTTTGAACCGCAGACTGAACTTCAGCCGCTGTTAGATGTTGAACAGGGACACCACCTA 93 7739329 0.985039344 31 75 599 0.814159292 1.662757832 0.203539823 0.182795699 0.327433628 93 20 1 92 2R:7739275-7739445 7 CG30497 FBtr0088934|FBtr0088933|FBtr0331966|FBtr0088932 7737766|7737766|7737017|7739112 7740276|7740276|7740276|7740276 AGACTGA 7mer-A1 dme-miR-14-3p 2R - 7739291 7739501 3'utr CG30497 FlyBase G15718.1 CATTACTCATATATTCGGTTGGCTACTTTCTTCGTTAACTGTATGATCAGAGGTCTATTTCACTGTTCCTTTTCTATATCTCTAATTGAATGTGTCCGGCGACTTGAAAGCCTTTCCACGACACTTGGCACACACGCGCTCCTACTTTAATAATGTAACTATCCCGAGAGTTTGAACCGCAGACTGAACTTCAGCCGCTGTTAGATGTTGA 57 7739312 0.985806849 19 43 370 0.755555556 1.531478917 0.266666667 0.385964912 0.611111111 57 21 1 68 2R:7739291-7739501 7 42.5 1764 FBgn0050497 2910.163333 68.06 105.1533333 0.014603991 0.624449016 0.404171686 8 -9 -0.5 0.1 dme-miR-999-3p 6mer3-8 AGTTAA 2R 7787887 7787892 + 2R_7787887_7787892_+ 1 1 1 0 CanB2 FBtr0088930|FBtr0309866 7787760|7787760 7788135|7789053 2R + 7787792 7787921 3'utr CanB2 FlyBase G13646.1 GATGTTATTTATTTATTTTATACACGTCGGCATCCTTCGATTGTCACTATCACCACTATTCATATGGTTATTATTTTTGATCGGCGATTCTCTATAGTTAAATATTGTTATGAGCCTTTGGCGAGCCAGT 30 7787908 0.994383499 17 19 255 0.666666667 1.079181246 0.194444444 0.133333333 0.277777778 30 11 1 24 2R:7787792-7787921 6 CanB2 FBtr0309866 7787760 7789053 AGTTAA 6mer3-8 dme-miR-999-3p 2R + 7787836 7787925 3'utr CanB2 FlyBase G10396.2 CACTATCACCACTATTCATATGGTTATTATTTTTGATCGGCGATTCTCTATAGTTAAATATTGTTATGAGCCTTTGGCGAGCCAGTTCAG 20 7787885 0.994248481 7 9 104 0.482758621 0.669006781 0.24137931 0.4 0.586206897 20 13 2 14 2R:7787836-7787925 6 5.5 1765 FBgn0015614 671.95 42.17666667 64.64333333 0.008185133 0.130403857 0.085082246 -21 2 -9.5 0.1 dme-miR-308-3p 8mer-m1 CTGTGATT 2R 7788280 7788287 + 2R_7788280_7788287_+ 0.385559159 0.385556589 0.385557874 1.84E-06 CanB2 FBtr0309866 7787760 7789053 2R + 7788233 7788308 3'utr CanB2 FlyBase G13648.1 CGAATGCACTTTCGCTCTATCATATTGATGTTATATTTCTAATTCTCCTGTGATTTTGCCAAAAACAAAACAAAAA 82 7788287 0.989321651 11 79 759 0.970588235 1.694605199 0.137254902 0.219512195 0.37254902 82 2 1 99 2R:7788233-7788308 8 CanB2 FBtr0309866 7787760 7789053 CTGTGATT 8mer-m1 dme-miR-308-3p 2R + 7788231 7788312 3'utr CanB2 FlyBase G10397.1 ATCGAATGCACTTTCGCTCTATCATATTGATGTTATATTTCTAATTCTCCTGTGATTTTGCCAAAAACAAAACAAAAAAAAA 72 7788287 0.989852015 11 70 690 0.97029703 1.991226076 0.148514851 0.333333333 0.524752475 72 3 0 98 2R:7788231-7788312 8 72.5 1766 FBgn0015614 671.95 42.17666667 64.64333333 0.107894933 1.71895993 1.1215387 -7 -7 -7 0.1 dme-miR-968-5p 6mer2-7 CTACTT 2R 7788481 7788486 + 2R_7788481_7788486_+ 0.945433079 0.582120872 0.763776975 0.25690052 CanB2 FBtr0309866 7787760 7789053 2R + 7788419 7788557 3'utr CanB2 FlyBase G13649.1 GGTCTCCTCTATTGACTTAGTCTTATTTACACGTTGTGTACTTTTTATATATTTATACATACCTACTTGTACTAATCGAATGTTATAACCTACGTAACGTATTTTTATATATCTTGACTAACTTGATAACACCAGAGGA 21 7788485 0.987525644 13 17 158 0.88 0.865301426 0.32 0.19047619 0.32 21 1 2 22 2R:7788419-7788557 6 CanB2 FBtr0309866 7787760 7789053 CTACTT 6mer2-7 dme-miR-968-5p 2R + 7788411 7788563 3'utr CanB2 FlyBase G10398.2 CCGAAGGAGGTCTCCTCTATTGACTTAGTCTTATTTACACGTTGTGTACTTTTTATATATTTATACATACCTACTTGTACTAATCGAATGTTATAACCTACGTAACGTATTTTTATATATCTTGACTAACTTGATAACACCAGAGGAAGGCGA 23 7788485 0.986639035 11 18 187 0.838709677 1.113943352 0.129032258 0.304347826 0.483870968 23 4 1 26 2R:7788411-7788563 6 6 1767 FBgn0015614 671.95 42.17666667 64.64333333 0.008929236 0.142258753 0.092816996 -4 -4 -4 0.1 dme-miR-33-5p 7mer-m8 CAATGCA 2R 7800854 7800860 - 2R_7800854_7800860_- 0.67451489 0.674515173 0.674515032 2.12E-07 Nop17l FBtr0088901|FBtr0088902|FBtr0088900 7800783|7800783|7800783 7801442|7801442|7801442 2R - 7800789 7800883 3'utr Nop17l FlyBase G20758.1 ATGTTTAGAAGCACTGGCTGAATCAATGCATGTAATTTTAACTTTTATAAGCGAGCTGCAAGTTAAAATACATATACATCTCTTATGAATGAGAA 115 7800861 0.986669353 11 112 968 0.946564885 1.792391689 0.198473282 0.113043478 0.221374046 115 6 1 124 2R:7800789-7800883 7 Nop17l FBtr0088902|FBtr0088900|FBtr0088901 7800783|7800783|7800783 7801442|7801442|7801442 CAATGCA 7mer-m8 dme-miR-33-5p 2R - 7800838 7800893 3'utr Nop17l FlyBase G15746.1 AGCTACGTACATGTTTAGAAGCACTGGCTGAATCAATGCATGTAATTTTAACTTTT 66 7800861 0.745426149 10 65 448 0.990291262 2.008600172 0.213592233 0.439393939 0.640776699 66 1 0 102 2R:7800838-7800893 7 84 1768 FBgn0033224 692.0466667 23.42333333 35.88666667 0.121379098 3.586167639 2.340702211 1 1 1 0.1 dme-miR-8-3p 7mer-A1 AGTATTA 2R 7800931 7800937 - 2R_7800931_7800937_- 0.822125208 0.820192287 0.821158747 0.001366767 Nop17l FBtr0088901|FBtr0088902|FBtr0088900 7800783|7800783|7800783 7801442|7801442|7801442 2R - 7800903 7801011 3'utr Nop17l FlyBase G20759.1 TGGCTCCATGCTCAGCTCATATAACAATCATAACACGATAAACCTAAACAATATCAATAGTTAACAATTCCTCTAGTATTACACACAACAAAATCACCCAATGCATAAG 26 7800937 0.974049211 13 23 153 0.911764706 1.190331698 0.029411765 0.192307692 0.382352941 26 2 1 31 2R:7800903-7801011 7 Nop17l FBtr0088902|FBtr0088900|FBtr0088901 7800783|7800783|7800783 7801442|7801442|7801442 AGTATTA 7mer-A1 dme-miR-8-3p 2R - 7800898 7800955 3'utr Nop17l FlyBase G15747.1 ATAGTTAACAATTCCTCTAGTATTACACACAACAAAATCACCCAATGCATAAGTAGAG 9 7800938 0.757729228 4 7 45 0.714285714 0.698970004 0 0.444444444 0.642857143 9 3 1 10 2R:7800898-7800955 7 9.5 1769 FBgn0033224 692.0466667 23.42333333 35.88666667 0.013727398 0.405578483 0.264722274 0 1 0.5 0.1 dme-miR-965-3p 6mer3-8 TACGCT 2R 7801142 7801147 - 2R_7801142_7801147_- 0.999999753 0.999999904 0.999999829 7.07E-08 Nop17l FBtr0088901|FBtr0088902|FBtr0088900 7800783|7800783|7800783 7801442|7801442|7801442 2R - 7801127 7801159 3'utr Nop17l FlyBase G20761.1 AAGATGAAATCCTACGCTGAACTGAAAAAGAAA 14 7801144 0.871131382 4 12 45 0.8125 1.113943352 0.3125 0.142857143 0.25 14 3 0 13 2R:7801127-7801159 6 Nop17l FBtr0088902|FBtr0088900|FBtr0088901 7800783|7800783|7800783 7801442|7801442|7801442 TACGCT 6mer3-8 dme-miR-965-3p 2R - 7801111 7801155 3'utr Nop17l FlyBase G15748.2 TGAAATCCTACGCTGAACTGAAAAAGAAACCTATTATTATAGATC 11 7801146 0.724848605 4 9 50 0.823529412 0.84509804 0.294117647 0.454545455 0.647058824 11 2 1 14 2R:7801111-7801155 6 12 1770 FBgn0033224 692.0466667 23.42333333 35.88666667 0.017339871 0.512309663 0.33438603 -3 -1 -2 0.1 dme-miR-1008-3p 6mer3-8 AGCTGT 2R 7809438 7809443 + 2R_7809438_7809443_+ 0.999944264 0.999927688 0.999935976 1.17E-05 sax FBtr0308825|FBtr0088832|FBtr0088833 7809418|7809418|7809418 7810067|7810067|7810067 2R + 7809271 7809455 stop_codon sax FlyBase G13672.1 TAATGACTGGCATGTCCAAGCTCATGAAGGAGTGCTGGCACCAAAACCCCGACGTGCGCTTGCCAGCGCTGCGCATCAAAAAGACTATACATAAGCTGGCTTCCGCTGACGAGAAGATACGCCTGGACTTCGACGAGGTCTGCGTTTAGTGGTAGTAGTCGAGCCTTAGCTGTAAGCGGTAATTT 164 7809436 0.833178411 21 160 801 0.980099502 2.294466226 0.373134328 0.195121951 0.343283582 164 4 0 197 2R:7809271-7809455 6 sax FBtr0088833|FBtr0308825|FBtr0088832 7809418|7809418|7809418 7810067|7810067|7810067 AGCTGT 6mer3-8 dme-miR-1008-3p 2R + 7809317 7809451 stop_codon sax FlyBase G10408.1 CCCCGACGTGCGCTTGCCAGCGCTGCGCATCAAAAAGACTATACATAAGCTGGCTTCCGCTGACGAGAAGATACGCCTGGACTTCGACGAGGTCTGCGTTTAGTGGTAGTAGTCGAGCCTTAGCTGTAAGCGGTA 115 7809436 0.918995346 11 113 625 0.983146067 1.765916794 0.494382022 0.382608696 0.601123596 115 1 2 175 2R:7809317-7809451 6 70 1771 FBgn0003317 608.98 30.24 46.27666667 0.114946304 2.314814815 1.51264136 2 2 2 0.1 dme-miR-278-3p 6mer2-7 CCACCG 2R 7809664 7809669 + 2R_7809664_7809669_+ 0.748343602 0.93476249 0.841553046 0.131818068 sax FBtr0308825|FBtr0088832|FBtr0088833 7809418|7809418|7809418 7810067|7810067|7810067 2R + 7809469 7809786 3'utr sax FlyBase G13673.1 AGGTAGTCTAAGATTCATTCATTGACATACCCTGCATTTCACACTATTAGTTCGTAGGTATATTATTCAAAGCTAAGCCAAGATCCTGCGTGTTGAAGCAAACTAATCCAAGTACAAGACCCTTGGGAGCTTATAGTTATATAGAAGACTTTAACATATTTACTTTATGTTTGGATTGACTTTATCGTTTCCGTTCCACCGTGAGCCTAGCCTGAAAAGGGTGCCTTTGAAATTGCCTTAAGTTAAAGTTAGCATCGACTCTAATGTATGTTCTTGGGATATCATCCTGTAAAGTTGTCATTTCACTATTTACCATTA 304 7809657 0.988428222 45 290 2672 0.945054945 1.934498451 0.31043956 0.174342105 0.31043956 304 17 3 344 2R:7809469-7809786 6 sax FBtr0088833|FBtr0308825|FBtr0088832 7809418|7809418|7809418 7810067|7810067|7810067 CCACCG 6mer2-7 dme-miR-278-3p 2R + 7809575 7809750 3'utr sax FlyBase G10410.1 TCCAAGTACAAGACCCTTGGGAGCTTATAGTTATATAGAAGACTTTAACATATTTACTTTATGTTTGGATTGACTTTATCGTTTCCGTTCCACCGTGAGCCTAGCCTGAAAAGGGTGCCTTTGAAATTGCCTTAAGTTAAAGTTAGCATCGACTCTAATGTATGTTCTTGGGATAT 145 7809657 0.987145729 26 136 1194 0.948837209 1.531478917 0.451162791 0.372413793 0.576744186 145 6 5 204 2R:7809575-7809750 6 160.5 1772 FBgn0003317 608.98 30.24 46.27666667 0.263555453 5.307539683 3.468270547 7 7 7 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 2R 7810003 7810009 + 2R_7810003_7810009_+ 0.782911769 0.782911821 0.782911795 0 sax FBtr0308825|FBtr0088832|FBtr0088833 7809418|7809418|7809418 7810067|7810067|7810067 2R + 7809790 7810065 3'utr sax FlyBase G13674.1 ATTGTTCATCAAGTGCCATTTGCAATTGAGAATTGTAAACGCCTTAACTTTAAGCTCACTCTTTGAACTTTACACTAAATTCATAACTCTAGAACTTGTCCATGCTATGATAAAACCATAAGCCACACCACCAACTGACTTGCTATCTTAGTTAGTTAAGCCTTTAGGACTTAGATACCCACGCATAGAAGCATACACACCTACTTGTATATTGTACAAATGGCAAGCTATTTAAGTTTTGTATAGTCTAAACGAAATGAAATACACGAATAGGCA 152 7810000 0.94802794 36 146 1070 0.974747475 2.285557309 0.126262626 0.263157895 0.434343434 152 5 0 193 2R:7809790-7810065 7 sax FBtr0088833|FBtr0308825|FBtr0088832 7809418|7809418|7809418 7810067|7810067|7810067 GTACAAA 7mer-A1 dme-miR-305-5p 2R + 7809783 7810060 3'utr sax FlyBase G10411.1 ATTATTCATTGTTCATCAAGTGCCATTTGCAATTGAGAATTGTAAACGCCTTAACTTTAAGCTCACTCTTTGAACTTTACACTAAATTCATAACTCTAGAACTTGTCCATGCTATGATAAAACCATAAGCCACACCACCAACTGACTTGCTATCTTAGTTAGTTAAGCCTTTAGGACTTAGATACCCACGCATAGAAGCATACACACCTACTTGTATATTGTACAAATGGCAAGCTATTTAAGTTTTGTATAGTCTAAACGAAATGAAATACACGAAT 104 7810001 0.982192411 26 96 712 0.891156463 1.640150041 0.081632653 0.288461538 0.496598639 104 14 2 131 2R:7809783-7810060 7 63 1773 FBgn0003317 608.98 30.24 46.27666667 0.103451673 2.083333333 1.361377224 3 2 2.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 7915134 7915140 - 2R_7915134_7915140_- 0.721834334 0.676873414 0.699353874 0.031792157 CG12159 FBtr0088889|FBtr0088889|FBtr0088889 7915025|7915025|7915025 7915167|7915167|7915167 2R - 7915045 7915158 3'utr CG12159 FlyBase G20817.1 AAGGAAAACAAAACCACTTGTGATAACGATTACGATGATATGTATGCAAGGCATTAAAAATCTCATAAATACCAATGCTTTCAAATCGCCTCTGCGTCGATGTTCCATATAAAT 60 7915141 0.963796414 14 56 290 0.950617284 1.40936947 0.135802469 0.266666667 0.456790123 60 2 2 77 2R:7915045-7915158 7 CG12159 FBtr0088889|FBtr0088889|FBtr0088889 7915025|7915025|7915025 7915167|7915167|7915167 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 7915083 7915159 3'utr CG12159 FlyBase G15799.1 AAAGGAAAACAAAACCACTTGTGATAACGATTACGATGATATGTATGCAAGGCATTAAAAATCTCATAAATACCAAT 33 7915141 0.937503461 7 33 130 1 1.633468456 0.046511628 0.303030303 0.465116279 33 0 0 43 2R:7915083-7915159 7 34 1774 FBgn0033232 247.6666667 34.99333333 53.14 0.137281292 0.971613641 0.639819345 1 1 1 0.1 dme-miR-92b-3p 8mer-m1 GTGCAATT 2R 7920582 7920589 + 2R_7920582_7920589_+ 0.593574281 0.594064194 0.593819238 0.000346412 Cul1 FBtr0088847|FBtr0088845|FBtr0088846|FBtr0088848 7920404|7920404|7920404|7920404 7920898|7920898|7921579|7920898 2R + 7920554 7920613 3'utr Cul1 FlyBase G13724.1 TAAAAATACTCCATGCTTCGCATAAAATGTGCAATTCTCGCCAACGCGTCACTAACTCCA 21 7920588 0.750688644 3 19 122 1 1.397940009 0 0.142857143 0.28 21 0 0 25 2R:7920554-7920613 8 Cul1 FBtr0088847|FBtr0088845|FBtr0088846|FBtr0088848 7920404|7920404|7920404|7920404 7920898|7920898|7921579|7920898 GTGCAATT 8mer-m1 dme-miR-92b-3p 2R + 7920553 7920688 3'utr Cul1 FlyBase G10451.1 CTAAAAATACTCCATGCTTCGCATAAAATGTGCAATTCTCGCCAACGCGTCACTAACTCCATCTTCCGACACCCAGCACCTCATTCAAAGAAAAGGCCAGTCGCAGGGATCAAGTGAACCTATTGACCAGATCACA 12 7920588 0.964820849 7 10 52 0.888888889 1.204119983 0.222222222 0.416666667 0.611111111 12 2 0 16 2R:7920553-7920688 8 10.5 1775 FBgn0015509 2248.283333 84.08 129.1466667 0.00467023 0.124881066 0.081302911 -6 -6 -6 0.1 dme-miR-283-5p 6mer3-8 TGATAT 2R 7929856 7929861 - 2R_7929856_7929861_- 0.99997213 0.999859415 0.999915773 7.97E-05 CG30381 FBtr0113374|FBtr0339129 7929656|7929656 7929980|7929980 2R - 7929842 7929884 3'utr CG30381 FlyBase G20828.1 GTTTGCATAGAAAACTCACTTATTGATATAGTTAAAGCGACTT 9 7929865 0.827672349 4 9 71 1 1.041392685 0.181818182 0.222222222 0.363636364 9 0 0 11 2R:7929842-7929884 6 CG30381 FBtr0339129|FBtr0113374 7929656|7929656 7929980|7929980 TGATAT 6mer3-8 dme-miR-283-5p 2R - 7929829 7929891 3'utr CG30381 FlyBase G15807.1 ATATGCTGTTTGCATAGAAAACTCACTTATTGATATAGTTAAAGCGACTTCAGCAGCTTCGAA 9 7929864 0.984813254 7 9 71 1 1.079181246 0.083333333 0.333333333 0.5 9 0 0 12 2R:7929829-7929891 6 7 1776 FBgn0050381 66.98 6.973333333 10.62333333 0.104508809 1.003824092 0.65892689 4 3 3.5 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 2R 7942171 7942177 - 2R_7942171_7942177_- 0.521223855 0.521223855 0.521223855 0 CG14764 FBtr0088880|FBtr0339128 7942041|7942041 7942634|7942634 2R - 7942153 7942203 3'utr CG14764 FlyBase G20843.1 ATAAAAACATCAAATGGCATACATTTTGTGATTGTATTTTATAGTTACTCA 160 7942179 0.672975227 9 152 1942 0.949748744 1.674401813 0.125628141 0.1875 0.346733668 160 7 3 189 2R:7942153-7942203 7 CG14764 FBtr0339128|FBtr0088880 7942041|7942041 7942634|7942634 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 7942121 7942201 3'utr CG14764 FlyBase G15816.1 AAAAACATCAAATGGCATACATTTTGTGATTGTATTTTATAGTTACTCACGCGTAGACAAACATATACAGTATATAAATAT 124 7942179 0.865553592 13 117 1413 0.946808511 1.551449998 0.14893617 0.362903226 0.579787234 124 6 4 178 2R:7942121-7942201 7 138 1777 FBgn0033236 872.35 39.06666667 59.99333333 0.158193386 3.532423208 2.300255584 2 2 2 0.1 dme-miR-7-5p 8mer-A1 GTCTTCCA 2R 7966217 7966224 + 2R_7966217_7966224_+ 0.392891128 0.483907296 0.438399212 0.064358172 nito FBtr0088857 7965281 7966686 2R + 7966175 7966251 3'utr nito FlyBase G13747.1 GCTGGCGATTCCATATCGTGTTCCGATCCCCGATCAATATCCGTCTTCCATCCGAAGAGAGAACGTCGTGTAGCATT 18 7966194 0.741906853 8 14 108 0.8 1 0.28 0.277777778 0.48 18 4 1 20 2R:7966175-7966251 8 nito FBtr0088857 7965281 7966686 GTCTTCCA 8mer-A1 dme-miR-7-5p 2R + 7966174 7966248 3'utr nito FlyBase G10467.1 GGCTGGCGATTCCATATCGTGTTCCGATCCCCGATCAATATCCGTCTTCCATCCGAAGAGAGAACGTCGTGTAGC 14 7966220 0.972382223 6 14 87 1 1.322219295 0.238095238 0.5 0.666666667 14 0 0 21 2R:7966174-7966248 8 10 1778 FBgn0027548 736.9233333 25.16 38.30666667 0.013569933 0.39745628 0.261051166 23 -3 10 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 7966475 7966480 + 2R_7966475_7966480_+ 0.886080584 0.998923903 0.942502243 0.079792263 nito FBtr0088857 7965281 7966686 2R + 7966448 7966496 3'utr nito FlyBase G13749.1 AATCCGAGCAGTTCACCCAGTGCATGTGCTGTGTATGCGTGTGTTCGCA 9 7966472 0.918889718 2 9 81 1 1 0.2 0.111111111 0.2 9 0 0 10 2R:7966448-7966496 6 nito FBtr0088857 7965281 7966686 GCTGTG 6mer2-7 dme-miR-1008-3p 2R + 7966453 7966493 3'utr nito FlyBase G10468.1 GAGCAGTTCACCCAGTGCATGTGCTGTGTATGCGTGTGTTC 4 7966473 0.984592317 3 4 35 1 0.84509804 0 0.5 0.714285714 4 0 0 7 2R:7966453-7966493 6 6.5 1779 FBgn0027548 736.9233333 25.16 38.30666667 0.008820456 0.258346582 0.169683258 3 2 2.5 0.1 dme-miR-282-5p 6mer3-8 AGAGGC 2R 7969139 7969144 - 2R_7969139_7969144_- 0.999996663 0.999998368 0.999997515 1.20E-06 CG8726 FBtr0088874|FBtr0088873|FBtr0301231 7968127|7968127|7968127 7969258|7969258|7969823 2R - 7969131 7969172 3'utr CG8726 FlyBase G20867.1 ACTAATCGAATTCCAAAAGCTACATTTTAGAGGCATATTAAG 7 7969162 0.815869123 4 6 42 0.909090909 1 0 0.571428571 0.727272727 7 1 0 10 2R:7969131-7969172 6 CG8726 FBtr0301231|FBtr0088874|FBtr0088873 7968127|7968127|7968127 7969823|7969258|7969258 AGAGGC 6mer3-8 dme-miR-282-5p 2R - 7969081 7969179 3'utr CG8726 FlyBase G15833.1 AACTTGAACTAATCGAATTCCAAAAGCTACATTTTAGAGGCATATTAAGAAACAGAATACTAGCAGATCGAAGACACCGCTGAGCATAGAATAGTCCCA 9 7969162 0.970068225 6 9 49 1 1.113943352 0 0.444444444 0.615384615 9 0 0 13 2R:7969081-7969179 6 3.5 1780 FBgn0033244 852.3333333 30.71666667 47.01 0.004106375 0.113944655 0.074452244 18 18 18 0.1 dme-miR-276a-3p 6mer2-7 GTTCCT 2R 8075716 8075721 + 2R_8075716_8075721_+ 0.999954579 0.999747915 0.999851247 0.000146159 lig FBtr0330630 8075416 8078815 2R + 8075698 8075762 3'utr lig FlyBase G13790.1 AGTGCGCCCATGCTAAATGTTCCTTACGCCTACTTCTATGGTGGCAATGTAATGCCCGGTAGTTT 41 8075715 0.824223447 7 38 279 0.936170213 1.342422681 0.106382979 0.175 0.29787234 40 2 1 44 2R:8075698-8075762 6 lig FBtr0330630 8075416 8078815 GTTCCT 6mer2-7 dme-miR-276a-3p 2R + 8075698 8075763 3'utr lig FlyBase G10492.1 AGTGCGCCCATGCTAAATGTTCCTTACGCCTACTTCTATGGTGGCAATGTAATGCCCGGTAGTTTT 31 8075715 0.898343073 5 29 198 0.976190476 1.311753861 0.095238095 0.3 0.5 30 0 1 41 2R:8075698-8075763 6 30 1781 FBgn0020279 5206.013333 127.7666667 197.3133333 0.005762567 0.234803026 0.152042437 1 1 1 0.1 dme-miR-14-3p 6mer2-7 AGACTG 2R 8076017 8076022 + 2R_8076017_8076022_+ 1 1 1 0 lig FBtr0330630 8075416 8078815 2R + 8075975 8076079 3'utr lig FlyBase G13792.1 AGGGCGGCTACTCGTCGAGCGTGAATCAGCAGAGCAAAACTCAGACTGTGTCCAACCAGTCGCAGGCAGGCACTGGATCCGATCTGACCTCTTCTATGTACGGAA 40 8076015 0.934436514 10 39 153 0.962264151 1.707570176 0.150943396 0.3 0.471698113 40 2 0 51 2R:8075975-8076079 6 lig FBtr0330630 8075416 8078815 AGACTG 6mer2-7 dme-miR-14-3p 2R + 8075976 8076037 3'utr lig FlyBase G10493.1 GGGCGGCTACTCGTCGAGCGTGAATCAGCAGAGCAAAACTCAGACTGTGTCCAACCAGTCGC 16 8076015 0.930839993 4 15 55 0.892857143 0.795880017 0.142857143 0.4375 0.678571429 16 0 3 25 2R:8075976-8076037 6 22.5 1782 FBgn0020279 5206.013333 127.7666667 197.3133333 0.004321925 0.17610227 0.114031828 2 2 2 0.1 dme-miR-308-3p 8mer-m1 CTGTGATT 2R 8076777 8076784 + 2R_8076777_8076784_+ 0.364304055 0.329408689 0.346856372 0.024674774 lig FBtr0100575 8076675 8077042 2R + 8076764 8076800 3'utr lig FlyBase G13795.1 GTACACTTGTTGACTGTGATTACATATAGGTTTATGT 16 8076774 0.69163216 4 16 153 1 1.278753601 0.052631579 0.1875 0.315789474 16 0 0 19 2R:8076764-8076800 8 lig FBtr0100575 8076675 8077042 CTGTGATT 8mer-m1 dme-miR-308-3p 2R + 8076763 8076804 3'utr lig FlyBase G10497.1 TGTACACTTGTTGACTGTGATTACATATAGGTTTATGTCCTT 19 8076773 0.670633392 7 18 185 0.9375 1.477121255 0.03125 0.421052632 0.65625 19 2 0 30 2R:8076763-8076804 8 17.5 1783 FBgn0020279 5206.013333 127.7666667 197.3133333 0.003361497 0.136968432 0.088691421 3 4 3.5 0.1 dme-miR-980-5p 6mer3-8 GAAAAA 2R 8078695 8078700 + 2R_8078695_8078700_+ 0.860483633 0.85713246 0.858808047 0.002369586 lig FBtr0301917|FBtr0301916|FBtr0304681|FBtr0330630|FBtr0346957|FBtr0088776|FBtr0330631|FBtr0304682|FBtr0088775|FBtr0088774|FBtr0301915 8077828|8077828|8077828|8075416|8077828|8077828|8078296|8077828|8077828|8077828|8077828 8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815 2R + 8078672 8078707 3'utr lig FlyBase G13800.1 AACCACAAACATAACGTGAATGAGAAAAAACAAAAC 8 8078692 0.846661893 3 8 16 1 0.954242509 0.444444444 0.125 0.222222222 8 0 0 9 2R:8078672-8078707 6 lig FBtr0088776|FBtr0330631|FBtr0088775|FBtr0301915|FBtr0330630|FBtr0304682|FBtr0346957|FBtr0088774|FBtr0304681|FBtr0301917|FBtr0301916 8077828|8078296|8077828|8077828|8075416|8077828|8077828|8077828|8077828|8077828|8077828 8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815 GAAAAA 6mer3-8 dme-miR-980-5p 2R + 8078671 8078705 3'utr lig FlyBase G10502.1 AAACCACAAACATAACGTGAATGAGAAAAAACAAA 11 8078692 0.884746274 3 11 21 1 1.322219295 0.142857143 0.545454545 0.761904762 11 0 0 21 2R:8078671-8078705 6 9 1784 FBgn0020279 5206.013333 127.7666667 197.3133333 0.00172877 0.070440908 0.045612731 3 3 3 0.1 dme-miR-283-5p 7mer-A1 GATATTA 2R 8079259 8079265 - 2R_8079259_8079265_- 0.782653984 0.782858527 0.782756255 0.000144603 Vps28 FBtr0310370 8078867 8079317 2R - 8079220 8079338 stop_codon Vps28 FlyBase G20924.1 AAGCTGCTGCACAGCCAGTAGCTATCAGTTTCTCATTGTTTACGTGTATCCCTAAATTTATATAGCATGTTCCGATATTAAACAAGTTTGATATATCACCTTACTTTTAGCGCAGACTA 31 8079271 0.989249939 10 28 273 0.923076923 1.255272505 0.076923077 0.258064516 0.41025641 31 2 1 36 2R:8079220-8079338 7 Vps28 FBtr0310370 8078867 8079317 GATATTA 7mer-A1 dme-miR-283-5p 2R - 8079245 8079325 stop_codon Vps28 FlyBase G15872.1 GCCAGTAGCTATCAGTTTCTCATTGTTTACGTGTATCCCTAAATTTATATAGCATGTTCCGATATTAAACAAGTTTGATAT 20 8079271 0.988412363 8 19 185 0.967741935 1.477121255 0.064516129 0.35 0.580645161 20 1 0 30 2R:8079245-8079325 7 16.5 1785 FBgn0021814 287.86 39.29666667 59.69 0.05731953 0.419882942 0.276428212 6 6 6 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 2R 8086793 8086799 + 2R_8086793_8086799_+ 0.782890032 0.78291152 0.782900776 1.52E-05 sut1 FBtr0088777 8086579 8087151 2R + 8086770 8086806 3'utr sut1 FlyBase G13808.2 CCGCCTAGCCTGTAAGTTCTTTTGTACAAACCAATAA 9 8086791 0.68849166 2 8 69 1 1.113943352 0 0.222222222 0.461538462 9 0 0 13 2R:8086770-8086806 7 sut1 FBtr0088777 8086579 8087151 GTACAAA 7mer-A1 dme-miR-305-5p 2R + 8086772 8086805 3'utr sut1 FlyBase G10511.1 GCCTAGCCTGTAAGTTCTTTTGTACAAACCAATA 8 8086791 0.97754337 2 8 59 1 1.041392685 0 0.375 0.545454545 8 0 0 11 2R:8086772-8086805 7 8 1786 FBgn0028563 340.6433333 17.19333333 26.42666667 0.023484975 0.465296627 0.302724521 2 2 2 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT 2R 8101980 8101986 + 2R_8101980_8101986_+ 0.658948054 0.658962708 0.658955381 1.03E-05 CG11210 FBtr0088781 8101903 8102306 2R + 8101947 8102058 3'utr CG11210 FlyBase G13825.1 TATCTACAAAAGCCACTAAGAACTTTTCAAGTTGGCAGCTTTGATTTGCATACGAAAGAATGACAGGAGGATAACAGCAAGGCAATTTGTGATACCTAAACCAGCCTCAATG 601 8101978 0.981650021 17 576 5224 0.959654179 1.64738297 0.103746398 0.141430948 0.25648415 601 14 14 666 2R:8101947-8102058 7 CG11210 FBtr0088781 8101903 8102306 GGCAGCT 7mer-m8 dme-miR-980-3p 2R + 8101952 8102056 3'utr CG11210 FlyBase G10524.1 ACAAAAGCCACTAAGAACTTTTCAAGTTGGCAGCTTTGATTTGCATACGAAAGAATGACAGGAGGATAACAGCAAGGCAATTTGTGATACCTAAACCAGCCTCAA 421 8101978 0.895021184 17 401 3635 0.958333333 1.562642679 0.106481481 0.363420428 0.586419753 421 11 16 621 2R:8101952-8102056 7 434.5 1787 FBgn0033259 595.3333333 24.97666667 38.03333333 0.729843225 17.39623649 11.42418931 2 2 2 0.1 dme-bantam-3p 6mer3-8 TGATCT 2R 8102109 8102114 + 2R_8102109_8102114_+ 1 0.999995108 0.999997554 3.46E-06 CG11210 FBtr0088781 8101903 8102306 2R + 8102077 8102129 3'utr CG11210 FlyBase G13826.1 CTGCACGCGAAAGCGATAGCAATATTTATTTCTGATCTGTATATAATCTACCT 21 8102102 0.991404109 9 19 208 0.956521739 1.041392685 0.086956522 0.095238095 0.173913043 21 0 1 22 2R:8102077-8102129 6 CG11210 FBtr0088781 8101903 8102306 TGATCT 6mer3-8 dme-bantam-3p 2R + 8102065 8102145 3'utr CG11210 FlyBase G10525.1 TTAATATGACCCCTGCACGCGAAAGCGATAGCAATATTTATTTCTGATCTGTATATAATCTACCTAATTTCCCAATTTTAT 17 8102102 0.993665925 8 15 179 0.88 1.342422681 0 0.411764706 0.6 17 3 0 22 2R:8102065-8102145 6 16.5 1788 FBgn0033259 595.3333333 24.97666667 38.03333333 0.027715566 0.660616575 0.433829974 7 7 7 0.1 dme-miR-277-3p 6mer3-8 TGCATT 2R 8102254 8102259 + 2R_8102254_8102259_+ 0.999385592 0.995370769 0.997378181 0.002838892 CG11210 FBtr0088781 8101903 8102306 2R + 8102239 8102324 3'utr CG11210 FlyBase G13827.2 AAATGAAACACGAAGTGCATTATATTTTCAAGTAATTTTTTATTTATGGTAAATAAAAAACTATTAAGTTATGCGTATCTCTTTTT 9 8102259 0.989644327 7 8 68 1 1.079181246 0.166666667 0.222222222 0.416666667 9 0 0 12 2R:8102239-8102324 6 CG11210 FBtr0088781 8101903 8102306 TGCATT 6mer3-8 dme-miR-277-3p 2R + 8102180 8102264 3'utr CG11210 FlyBase G10526.1 CTGCTTAACAAAGGGCTCGACGCTGATTTTTTGAAGCAGTAATGCTGGTAATATTTTACAAATGAAACACGAAGTGCATTATATT 10 8102258 0.967804344 9 10 60 1 1.146128036 0.285714286 0.4 0.571428571 10 0 0 14 2R:8102180-8102264 6 3.5 1789 FBgn0033259 595.3333333 24.97666667 38.03333333 0.005879059 0.140130789 0.09202454 -5 -4 -4.5 0.1 dme-miR-283-5p 8mer-A1 TGATATTA 2R 8114367 8114374 - 2R_8114367_8114374_- 0.592172616 0.590606141 0.591389378 0.001107683 Asap FBtr0300954|FBtr0339300 8114284|8114284 8115265|8115265 2R - 8114315 8114423 3'utr Asap FlyBase G20953.1 ATTTTGTATACACGTTTCAGTATTTATTTAGCAAAACCTTAAAGCATATTGATATTATATGTAAGTCAAATAAACGGAAGAACATAACGCTTATTACATATATACACAT 93 8114376 0.835306613 14 86 843 0.93 1.667452953 0.14 0.064516129 0.13 93 6 1 93 2R:8114315-8114423 8 Asap FBtr0339300|FBtr0300954 8114284|8114284 8115265|8115265 TGATATTA 8mer-A1 dme-miR-283-5p 2R - 8114317 8114427 3'utr Asap FlyBase G15890.1 ACTCATTTTGTATACACGTTTCAGTATTTATTTAGCAAAACCTTAAAGCATATTGATATTATATGTAAGTCAAATAAACGGAAGAACATAACGCTTATTACATATATACAC 46 8114376 0.799174248 12 43 420 0.953846154 1.491361694 0.076923077 0.304347826 0.507692308 46 2 1 62 2R:8114317-8114427 8 27 1790 FBgn0050372 698.41 18.11666667 27.74 0.03865924 1.490340386 0.97332372 2 2 2 0.1 dme-miR-8-3p 7mer-m8 CAGTATT 2R 8114400 8114406 - 2R_8114400_8114406_- 0.660291902 0.661609193 0.660950547 0.000931472 Asap FBtr0300954|FBtr0339300 8114284|8114284 8115265|8115265 2R - 8114315 8114423 3'utr Asap FlyBase G20953.1 ATTTTGTATACACGTTTCAGTATTTATTTAGCAAAACCTTAAAGCATATTGATATTATATGTAAGTCAAATAAACGGAAGAACATAACGCTTATTACATATATACACAT 93 8114377 0.835306613 14 86 843 0.93 1.667452953 0.14 0.064516129 0.13 93 6 1 93 2R:8114315-8114423 7 Asap FBtr0339300|FBtr0300954 8114284|8114284 8115265|8115265 CAGTATT 7mer-m8 dme-miR-8-3p 2R - 8114317 8114427 3'utr Asap FlyBase G15890.1 ACTCATTTTGTATACACGTTTCAGTATTTATTTAGCAAAACCTTAAAGCATATTGATATTATATGTAAGTCAAATAAACGGAAGAACATAACGCTTATTACATATATACAC 46 8114408 0.799174248 12 43 420 0.953846154 1.491361694 0.076923077 0.304347826 0.507692308 46 2 1 62 2R:8114317-8114427 7 24 1791 FBgn0050372 698.41 18.11666667 27.74 0.034363769 1.32474701 0.86517664 -29 2 -13.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2R 8114589 8114594 - 2R_8114589_8114594_- 0.999996493 0.999996613 0.999996553 7.07E-08 Asap FBtr0300954|FBtr0339300 8114284|8114284 8115265|8115265 2R - 8114567 8114617 3'utr Asap FlyBase G20956.1 AAAAAGAAGAGCAAAAGCCCTTTGTACCTAGAAGTTGTTACCAATTAAGTA 59 8114595 0.968369066 3 59 328 1 1.826074803 0.089552239 0.118644068 0.223880597 59 0 0 67 2R:8114567-8114617 6 Asap FBtr0339300|FBtr0300954 8114284|8114284 8115265|8115265 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2R - 8114568 8114614 3'utr Asap FlyBase G15891.1 AAGAAGAGCAAAAGCCCTTTGTACCTAGAAGTTGTTACCAATTAAGT 40 8114595 0.974265662 3 38 236 0.925925926 1.698970004 0.037037037 0.275 0.462962963 40 4 0 50 2R:8114568-8114614 6 49.5 1792 FBgn0050372 698.41 18.11666667 27.74 0.070875274 2.732290708 1.78442682 1 1 1 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 8114997 8115002 - 2R_8114997_8115002_- 0.727223477 0.816725171 0.771974324 0.063287259 Asap FBtr0300954|FBtr0339300 8114284|8114284 8115265|8115265 2R - 8114908 8115028 3'utr Asap FlyBase G20959.1 AATCAAAGCCTTTAAGTAGCGATCTTGCTGTGCATTTCCCGTTGGCTTCCTTCATAAGGTTAGCGCTTTAATAACTGAATATGTCCTGCAAATGCTGTAATTCGTACCATAACTAGATCTA 84 8115003 0.878334542 17 81 670 0.95959596 1.977723605 0.090909091 0.154761905 0.282828283 84 4 0 95 2R:8114908-8115028 6 Asap FBtr0339300|FBtr0300954 8114284|8114284 8115265|8115265 GCTGTG 6mer2-7 dme-miR-1008-3p 2R - 8114838 8115076 3'utr Asap FlyBase G15892.1 AAGTTACTCTTAGCTTAGAAGCCAACTACTCATTTACACTTGTATTTCAATCAAAGCCTTTAAGTAGCGATCTTGCTGTGCATTTCCCGTTGGCTTCCTTCATAAGGTTAGCGCTTTAATAACTGAATATGTCCTGCAAATGCTGTAATTCGTACCATAACTAGATCTAACTTTAACTTAGCCTAAAACGCTGTGCGCAAAAGTTACTCAATGTCAGAAGAATTGTCGGGAGATAAGCT 82 8115004 0.892757701 29 78 627 0.944 1.594760753 0.112 0.353658537 0.576 82 5 2 118 2R:8114838-8115076 6 39.5 1793 FBgn0050372 698.41 18.11666667 27.74 0.056557037 2.180312787 1.423936554 1 2 1.5 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT 2R 8129313 8129319 + 2R_8129313_8129319_+ 0.652673394 0.651081093 0.651877243 0.001125926 Socs44A FBtr0088784 8128794 8129476 2R + 8129254 8129335 3'utr Socs44A FlyBase G13846.3 ATTTTTGTATTCCTAACTTGGACACTAACTTTTTGCTAATCTAGATTGCATGGAATTTAGGCAGCTTTACGGCAATCGAATA 90 8129320 0.760770134 13 84 578 0.964912281 1.740362689 0.175438596 0.211111111 0.377192982 90 3 1 110 2R:8129254-8129335 7 Socs44A FBtr0088784 8128794 8129476 GGCAGCT 7mer-m8 dme-miR-980-3p 2R + 8129293 8129378 3'utr Socs44A FlyBase G10542.1 TCTAGATTGCATGGAATTTAGGCAGCTTTACGGCAATCGAATACGTTCAATGCCAATTACTCTTGTTGCAACGTGTATGTATTTTA 74 8129320 0.778587119 12 71 510 0.963636364 2.025305865 0.236363636 0.405405405 0.6 74 4 0 106 2R:8129293-8129378 7 71 1794 FBgn0033266 360.15 23.80333333 36.32666667 0.197140081 2.982775522 1.954487062 -7 -7 -7 0.1 dme-miR-1006-3p 7mer-A1 GAATTTA 2R 8134179 8134185 + 2R_8134179_8134185_+ 0.821901893 0.823245994 0.822573943 0.000950422 Pabp2 FBtr0088785 8133179 8134374 2R + 8134144 8134213 3'utr Pabp2 FlyBase G13857.1 ATATATAGAGTAAAGAGAAGATAAGAAAAGAAGTTGAATTTACTAAAGCGAAAAAGATGAAGACAAATAT 46 8134177 0.915174772 9 45 185 0.981132075 1.716003344 0.188679245 0.130434783 0.245283019 46 1 0 52 2R:8134144-8134213 7 Pabp2 FBtr0088785 8133179 8134374 GAATTTA 7mer-A1 dme-miR-1006-3p 2R + 8134145 8134205 3'utr Pabp2 FlyBase G10555.1 TATATAGAGTAAAGAGAAGATAAGAAAAGAAGTTGAATTTACTAAAGCGAAAAAGATGAAG 22 8134177 0.957730616 4 22 102 1 1.397940009 0.36 0.090909091 0.2 22 0 0 25 2R:8134145-8134205 7 25 1795 FBgn0005648 3045.73 202.1266667 313.4 0.008208213 0.123684818 0.079770262 2 2 2 0.1 dme-miR-999-3p 6mer3-8 AGTTAA 2R 8137090 8137095 - 2R_8137090_8137095_- 0.839052182 0.884426007 0.861739095 0.032084122 Lpin FBtr0303583|FBtr0303573|FBtr0303584|FBtr0113055 8136984|8136984|8136984|8136984 8137486|8137486|8137486|8137486 2R - 8137019 8137157 3'utr Lpin FlyBase G20993.1 AGACGGCGCATAGGAGTTGTGATTTTGATTTCATTATTTTTCGTATGTGATCATTTAAATTAAGTTAATTGTGATGAGGTTTTTATTTGAAGTTTTTATGAAAACTGTGCTCTAAACCTATGTATACTTAACTGATAGT 283 8137090 0.822479914 30 253 2521 0.91954023 1.359021943 0.227011494 0.173144876 0.327586207 283 15 13 320 2R:8137019-8137157 6 Lpin FBtr0303573|FBtr0113055|FBtr0303583|FBtr0303584 8136984|8136984|8136984|8136984 8137486|8137486|8137486|8137486 AGTTAA 6mer3-8 dme-miR-999-3p 2R - 8136985 8137157 3'utr Lpin FlyBase G15918.1 AGACGGCGCATAGGAGTTGTGATTTTGATTTCATTATTTTTCGTATGTGATCATTTAAATTAAGTTAATTGTGATGAGGTTTTTATTTGAAGTTTTTATGAAAACTGTGCTCTAAACCTATGTATACTTAACTGATAGTGTTTCAATACCAATAAATGCTTCAAATTCAAACA 189 8137090 0.98958929 31 169 1771 0.876865672 1.416825353 0.23880597 0.285714286 0.496268657 189 25 8 235 2R:8136985-8137157 6 82 1796 FBgn0263593 1170.44 33.67 51.33333333 0.070059123 2.435402435 1.597402597 -5 -5 -5 0.1 dme-miR-276a-3p 6mer2-7 GTTCCT 2R 8137196 8137201 - 2R_8137196_8137201_- 0.993999007 0.999901933 0.99695047 0.004173981 Lpin FBtr0303583|FBtr0303573|FBtr0303584|FBtr0113055 8136984|8136984|8136984|8136984 8137486|8137486|8137486|8137486 2R - 8137169 8137223 3'utr Lpin FlyBase G20993.2 TAATAGTGACTACTATAAGTATGTTCCTTTGAGACTCCCCGCAGGTTCGTAGATG 86 8137195 0.877702611 10 79 640 0.941176471 1.681241237 0.166666667 0.186046512 0.31372549 86 5 1 96 2R:8137169-8137223 6 Lpin FBtr0303573|FBtr0113055|FBtr0303583|FBtr0303584 8136984|8136984|8136984|8136984 8137486|8137486|8137486|8137486 GTTCCT 6mer2-7 dme-miR-276a-3p 2R - 8137159 8137219 3'utr Lpin FlyBase G15918.2 AGTGACTACTATAAGTATGTTCCTTTGAGACTCCCCGCAGGTTCGTAGATGATGCATATTC 64 8137195 0.774649765 9 60 456 0.913043478 1.447158031 0.076086957 0.34375 0.543478261 64 6 2 84 2R:8137159-8137219 6 67 1797 FBgn0263593 1170.44 33.67 51.33333333 0.05724343 1.98990199 1.305194805 -6 -6 -6 0.1 dme-miR-980-3p 6mer2-7 GCAGCT 2R 8138195 8138200 - 2R_8138195_8138200_- 0.998220143 0.997807543 0.998013843 0.000291752 Lpin FBtr0303577|FBtr0303585|FBtr0303575|FBtr0303578|FBtr0088815|FBtr0303574 8137986|8137986|8137986|8137986|8137986|8137986 8138234|8138234|8138234|8138234|8138234|8138234 2R - 8138189 8138220 3'utr Lpin FlyBase G21000.1 TAGCCCCAGTCGAAGGTTGTGCAGCTTGCAAA 5 8138203 0.718894525 3 5 21 1 0.698970004 0.2 0 0 5 0 0 5 2R:8138189-8138220 6 Lpin FBtr0303578|FBtr0303575|FBtr0088815|FBtr0303574|FBtr0303577|FBtr0303585 8137986|8137986|8137986|8137986|8137986|8137986 8138234|8138234|8138234|8138234|8138234|8138234 GCAGCT 6mer2-7 dme-miR-980-3p 2R - 8138188 8138225 3'utr Lpin FlyBase G15923.1 AGTCCTAGCCCCAGTCGAAGGTTGTGCAGCTTGCAAAT 11 8138194 0.956972445 4 11 55 1 1.113943352 0.076923077 0.181818182 0.307692308 11 0 0 13 2R:8138188-8138225 6 7.5 1798 FBgn0263593 1170.44 33.67 51.33333333 0.006407847 0.222750223 0.146103896 3 -6 -1.5 0.1 dme-miR-965-3p 6mer3-8 TACGCT 2R 8161854 8161859 - 2R_8161854_8161859_- 0.70966623 0.7837009 0.746683565 0.052350438 RagC-D FBtr0088807 8161677 8161902 2R - 8161718 8161887 3'utr RagC-D FlyBase G21017.1 AAGCGGAGAGCCCCTTTTATTGCCCCCCTACGCTAGCTTCTCTGTGGACTCTTTGATTCCAATTTGTACGTTCTCTTCCGTTAAATCTGATGTTACCTTTGTCTATTGATACGTTAGGACGCCACTCTCACAGAGCAGCGTAAAAAATTGCCCAGCGGTTGAAATTATTG 54 8161867 0.966553619 14 52 440 0.968253968 1.785329835 0.079365079 0.12962963 0.253968254 54 2 0 61 2R:8161718-8161887 6 RagC-D FBtr0088807 8161677 8161902 TACGCT 6mer3-8 dme-miR-965-3p 2R - 8161832 8161883 3'utr RagC-D FlyBase G15933.1 GGAGAGCCCCTTTTATTGCCCCCCTACGCTAGCTTCTCTGTGGACTCTTTGA 11 8161867 0.793289881 6 10 78 0.923076923 1.079181246 0.230769231 0.181818182 0.307692308 11 1 0 12 2R:8161832-8161883 6 14.5 1799 FBgn0033272 281 22.17 34.04333333 0.051601423 0.654036987 0.425927739 8 8 8 0.1 dme-miR-8-3p 7mer-m8 CAGTATT 2R 8239941 8239947 + 2R_8239941_8239947_+ 0.661615144 0.661615145 0.661615144 0 pnut FBtr0088793|FBtr0088792 8239675|8239675 8240297|8240297 2R + 8239918 8239961 3'utr pnut FlyBase G13949.1 GTACATATAACACATAGCAGTTGCAGTATTTTACCAATATATAT 38 8239938 0.820954135 4 38 304 1 1.62324929 0 0.105263158 0.19047619 38 0 0 42 2R:8239918-8239961 7 pnut FBtr0088793|FBtr0088792 8239675|8239675 8240297|8240297 CAGTATT 7mer-m8 dme-miR-8-3p 2R + 8239920 8239984 3'utr pnut FlyBase G10615.1 ACATATAACACATAGCAGTTGCAGTATTTTACCAATATATATCCACGCATTACTTGACGAAACAC 25 8239938 0.934903954 7 24 174 1 1.505149978 0 0.24 0.40625 25 0 0 32 2R:8239920-8239984 7 29.5 1800 FBgn0013726 2422.526667 120.4666667 184.8733333 0.012177369 0.244881018 0.159568714 3 3 3 0.1 dme-miR-1006-3p 7mer-A1 GAATTTA 2R 8597565 8597571 - 2R_8597565_8597571_- 0.817047105 0.82334954 0.820198323 0.00445647 CG8735 FBtr0339357|FBtr0088730 8596970|8597526 8597686|8597686 2R - 8597550 8597598 3'utr CG8735 FlyBase G21027.1 ATTTGAAAAAGAATCATCTGTTATCATGAATTTATTGTCGAAAAAAAAA 7 8597564 0.9807775 5 7 53 1 0.84509804 0.142857143 0 0 7 0 0 7 2R:8597550-8597598 7 CG8735 FBtr0339357|FBtr0088730 8596970|8597526 8597686|8597686 GAATTTA 7mer-A1 dme-miR-1006-3p 2R - 8597559 8597592 3'utr CG8735 FlyBase G15940.1 AAAAGAATCATCTGTTATCATGAATTTATTGTCG 7 8597572 0.664854065 4 5 66 0.818181818 0.954242509 0.454545455 0.428571429 0.636363636 7 2 0 9 2R:8597559-8597592 7 7 1801 FBgn0033309 330.0133333 24.15666667 37.01 0.021211264 0.289775079 0.189138071 -7 1 -3 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 8610969 8610976 + 2R_8610969_8610976_+ 0.500110036 0.500111855 0.500110945 1.34E-06 rgr FBtr0088692|FBtr0339354 8610887|8610887 8611238|8612295 2R + 8610942 8610995 3'utr rgr FlyBase G13976.1 ATCGTAGGGCGTTAGATGTGTGTCCGTGTACTTAAAGTTATTTTGCCGTCTAGC 100 8610968 0.815166114 6 97 859 0.975 2.068185862 0.058333333 0.18 0.316666667 100 3 0 117 2R:8610942-8610995 8 rgr FBtr0088692|FBtr0339354 8610887|8610887 8611238|8612295 GTACTTAA 8mer-A1 dme-miR-252-5p 2R + 8610933 8611007 3'utr rgr FlyBase G10633.1 TACAAAGCAATCGTAGGGCGTTAGATGTGTGTCCGTGTACTTAAAGTTATTTTGCCGTCTAGCATATACCAATCA 91 8610968 0.951277547 8 87 756 0.957142857 2.127104798 0.035714286 0.384615385 0.6 91 6 0 134 2R:8610933-8611007 8 94 1802 FBgn0267792 576.07 20.24333333 30.99 0.163174614 4.643504034 3.033236528 1 1 1 0.1 dme-miR-184-5p 7mer-A1 GATAAGA 2R 8619784 8619790 + 2R_8619784_8619790_+ 0.558789494 0.681442214 0.620115854 0.086728556 Cirl FBtr0310449|FBtr0310450|FBtr0305080 8619651|8619651|8619651 8620151|8620151|8620151 2R + 8619704 8619859 3'utr Cirl FlyBase G13981.1 ATTTATGACCGAGAGACACATGTGATATAATGCTTAAGTAACTTAAATTGTTAATGAACCTCTCTCTGGCAGGATTCAAAGATAAGACTCAAAAGCTGTGCTGGGCAGCGATGATCACTGTTGCGTCCCAGTAACAGCTTGCACGCGAAGACTCCC 90 8619786 0.975465263 18 73 460 0.8125 1.356981401 0.232142857 0.2 0.357142857 90 18 3 91 2R:8619704-8619859 7 Cirl FBtr0305080|FBtr0310449|FBtr0310450 8619651|8619651|8619651 8620151|8620151|8620151 GATAAGA 7mer-A1 dme-miR-184-5p 2R + 8619754 8619813 3'utr Cirl FlyBase G10638.1 TTAATGAACCTCTCTCTGGCAGGATTCAAAGATAAGACTCAAAAGCTGTGCTGGGCAGCG 37 8619786 0.927644349 7 19 160 0.517857143 1.161368002 0.357142857 0.405405405 0.607142857 37 26 1 29 2R:8619754-8619813 7 39 1803 FBgn0033313 1194.753333 23.36 35.54 0.032642721 1.669520548 1.097355093 -2 -2 -2 0.1 dme-miR-263a-5p 7mer-m1 TGCCATT 2R 8623885 8623891 + 2R_8623885_8623891_+ 0.765582436 0.765569426 0.765575931 9.19E-06 Cirl FBtr0290112|FBtr0305082|FBtr0305081|FBtr0301363|FBtr0310448 8623506|8623506|8623506|8623506|8623506 8625203|8625203|8625203|8624135|8625203 2R + 8623774 8623926 3'utr Cirl FlyBase G13988.1 TTGGAATCGGGCCCTTCGACTTGCATGCATTTTATACCAACTTGGAAATCGATATTAAATATAAATGTATGTACCATATATGTATGATGTATTGTAATACATGTCACCACATGCCATTTTTAAATACTTAAAAACTAATTTAAACAACCAGAA 25 8623885 0.988257074 12 21 191 0.9 1.431363764 0.166666667 0.2 0.333333333 25 3 0 27 2R:8623774-8623926 7 Cirl FBtr0305081|FBtr0301363|FBtr0310448|FBtr0290112|FBtr0305082 8623506|8623506|8623506|8623506|8623506 8625203|8624135|8625203|8625203|8625203 TGCCATT 7mer-m1 dme-miR-263a-5p 2R + 8623844 8623897 3'utr Cirl FlyBase G10644.1 GTACCATATATGTATGATGTATTGTAATACATGTCACCACATGCCATTTTTAAA 8 8623885 0.956786802 4 8 63 1 1.079181246 0.083333333 0.375 0.583333333 8 0 0 12 2R:8623844-8623897 7 7 1804 FBgn0033313 1194.753333 23.36 35.54 0.00585895 0.299657534 0.196961171 0 0 0 0.1 dme-miR-283-5p 6mer3-8 TGATAT 2R 8623986 8623991 + 2R_8623986_8623991_+ 0.983512496 0.682072379 0.832792438 0.213150339 Cirl FBtr0290112|FBtr0305082|FBtr0305081|FBtr0301363|FBtr0310448 8623506|8623506|8623506|8623506|8623506 8625203|8625203|8625203|8624135|8625203 2R + 8623963 8624009 3'utr Cirl FlyBase G13989.1 AAGATCTAGGAACTGTATGTACATGATATATAGAATTCAGGCGAATT 25 8623980 0.699055662 6 23 167 0.928571429 1.414973348 0.107142857 0.12 0.214285714 25 2 0 26 2R:8623963-8624009 6 Cirl FBtr0305081|FBtr0301363|FBtr0310448|FBtr0290112|FBtr0305082 8623506|8623506|8623506|8623506|8623506 8625203|8624135|8625203|8625203|8625203 TGATAT 6mer3-8 dme-miR-283-5p 2R + 8623955 8624010 3'utr Cirl FlyBase G10645.1 ATATGTATAAGATCTAGGAACTGTATGTACATGATATATAGAATTCAGGCGAATTA 26 8623980 0.946348872 7 26 166 1 1.62324929 0.023809524 0.384615385 0.619047619 26 0 0 42 2R:8623955-8624010 6 23 1805 FBgn0033313 1194.753333 23.36 35.54 0.019250836 0.984589041 0.647158132 6 6 6 0.1 dme-miR-276a-3p 7mer-m8 AGTTCCT 2R 8664347 8664353 + 2R_8664347_8664353_+ 0.63150784 0.63152467 0.631516255 1.20E-05 ptc FBtr0089427 8664335 8665223 2R + 8664303 8664392 stop_codon ptc FlyBase G14009.1 CAGGGCGGTGCGCAGCTATAACTTTACGAGTTAGCACTAGCACTAGTTCCTGTAGCTATTAGGACGTATCTTTAGACTCTAGCCTAAGCC 21 8664346 0.944785391 8 19 150 0.913043478 1.021189299 0.217391304 0.095238095 0.173913043 21 1 1 21 2R:8664303-8664392 7 ptc FBtr0089427 8664335 8665223 AGTTCCT 7mer-m8 dme-miR-276a-3p 2R + 8664334 8664385 stop_codon ptc FlyBase G10662.1 TAGCACTAGCACTAGTTCCTGTAGCTATTAGGACGTATCTTTAGACTCTAGC 10 8664346 0.955614806 6 10 78 1 1.301029996 0.05 0.6 0.8 10 0 0 20 2R:8664334-8664385 7 11 1806 FBgn0003892 243 5.353333333 8.3 0.04526749 2.054794521 1.325301205 1 1 1 0.1 dme-miR-252-5p 7mer-m8 GTACTTA 2R 8664859 8664865 + 2R_8664859_8664865_+ 0.588236585 0.588136572 0.588186578 7.07E-05 ptc FBtr0089427 8664335 8665223 2R + 8664831 8664872 3'utr ptc FlyBase G14011.1 ATTGTAACACACGCAAAACACACACAATGTACTTACATATAA 27 8664858 0.96645889 3 23 117 0.882352941 1.176091259 0 0.185185185 0.352941176 27 3 1 30 2R:8664831-8664872 7 ptc FBtr0089427 8664335 8665223 GTACTTA 7mer-m8 dme-miR-252-5p 2R + 8664811 8664872 3'utr ptc FlyBase G10663.1 ACTTAAACTTAGAGATATTTATTGTAACACACGCAAAACACACACAATGTACTTACATATAA 18 8664858 0.965700495 3 18 87 1 1.477121255 0 0.5 0.7 18 0 0 30 2R:8664811-8664872 7 21 1807 FBgn0003892 243 5.353333333 8.3 0.086419753 3.922789539 2.530120482 1 1 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 8664971 8664976 + 2R_8664971_8664976_+ 0.999997808 0.837066349 0.918532078 0.115209969 ptc FBtr0089427 8664335 8665223 2R + 8664946 8664989 3'utr ptc FlyBase G14012.1 ATGTACATAAAACACAAGGACTTGAACCAAAATAGTATCGCTTA 26 8664978 0.842737215 3 22 125 0.862068966 0.795880017 0.068965517 0.115384615 0.206896552 26 1 3 25 2R:8664946-8664989 6 ptc FBtr0089427 8664335 8665223 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 8664954 8664990 3'utr ptc FlyBase G10665.1 AAAACACAAGGACTTGAACCAAAATAGTATCGCTTAA 9 8664978 0.942361114 3 9 40 1 1.079181246 0.083333333 0.222222222 0.416666667 9 0 0 12 2R:8664954-8664990 6 16.5 1808 FBgn0003892 243 5.353333333 8.3 0.067901235 3.082191781 1.987951807 -7 -7 -7 0.1 dme-miR-2a-2-5p 8mer-A1 TGATGAGA 2R 8682043 8682050 + 2R_8682043_8682050_+ 0.598889846 0.566290491 0.582590169 0.023051186 Acsl FBtr0088700|FBtr0100430|FBtr0088701|FBtr0088699|FBtr0100428|FBtr0333001|FBtr0100431|FBtr0100427|FBtr0100429|FBtr0100426 8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604 8682791|8682791|8682339|8682791|8682791|8682339|8682791|8683022|8682791|8682791 2R + 8681950 8682166 3'utr Acsl FlyBase G14034.1 AAGCTGAGTTTGGTTTGGAAATGCGCTGTGTATGTGCTAGGAATGCTGTTCAACCGATTGACAATGATAATGGTAATGATAACTGAATGCCGATGATGAGAAGGAATATTGTATACTGTACAGTTTTCGGTTTATAGTACATTGTGTGGCAAATTTATATTGCAGAAAAATACTTATTTTTATATTAAGCTTAAGTGGTTGCCTATTAATTATGTAC 102 8682043 0.903087221 28 93 704 0.912 1.45484486 0.208 0.225490196 0.368 102 8 3 114 2R:8681950-8682166 8 Acsl FBtr0100428|FBtr0333001|FBtr0100427|FBtr0100431|FBtr0100426|FBtr0100429|FBtr0088700|FBtr0100430|FBtr0088701|FBtr0088699 8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604 8682791|8682339|8683022|8682791|8682791|8682791|8682791|8682791|8682339|8682791 TGATGAGA 8mer-A1 dme-miR-2a-2-5p 2R + 8681891 8682101 3'utr Acsl FlyBase G10682.1 ATTACTCGTTTCTCATTTTAATAAAGTTCGCAAAGACTTGCTTGGCAGATATGTAGCTGAAGCTGAGTTTGGTTTGGAAATGCGCTGTGTATGTGCTAGGAATGCTGTTCAACCGATTGACAATGATAATGGTAATGATAACTGAATGCCGATGATGAGAAGGAATATTGTATACTGTACAGTTTTCGGTTTATAGTACATTGTGTGGCAA 71 8682013 0.978200447 27 71 477 1 2.025305865 0.320754717 0.281690141 0.518867925 71 0 0 106 2R:8681891-8682101 8 21 1809 FBgn0263120 3324.373333 107.4633333 164.07 0.00631698 0.195415491 0.127994149 0 30 15 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2R 8682571 8682576 + 2R_8682571_8682576_+ 0.980894469 0.994736881 0.987815675 0.009788055 Acsl FBtr0088700|FBtr0100430|FBtr0088699|FBtr0100428|FBtr0100431|FBtr0100427|FBtr0100429|FBtr0100426 8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604 8682791|8682791|8682791|8682791|8682791|8683022|8682791|8682791 2R + 8682532 8682608 3'utr Acsl FlyBase G14038.1 ACGTAAAGAGAAAAGTCAAAATTAATATGCAACAAATGAAAGACTTAGTACCAAAATATAATAAAAACACTGAAATC 20 8682568 0.942696423 6 19 80 0.952380952 1.301029996 0 0.05 0.095238095 20 1 0 20 2R:8682532-8682608 6 Acsl FBtr0100428|FBtr0100427|FBtr0100431|FBtr0100426|FBtr0100429|FBtr0088700|FBtr0100430|FBtr0088699 8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604 8682791|8683022|8682791|8682791|8682791|8682791|8682791|8682791 AAGACT 6mer3-8 dme-miR-14-3p 2R + 8682538 8682589 3'utr Acsl FlyBase G10685.1 AGAGAAAAGTCAAAATTAATATGCAACAAATGAAAGACTTAGTACCAAAATA 7 8682568 0.989847246 2 6 29 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 2R:8682538-8682589 6 9.5 1810 FBgn0263120 3324.373333 107.4633333 164.07 0.002857681 0.088402246 0.057902115 3 3 3 0.1 dme-miR-283-5p 6mer2-7 GATATT 2R 8718040 8718045 - 2R_8718040_8718045_- 0.786696336 0.985927579 0.886311957 0.140877803 CG14767 FBtr0088719|FBtr0088720|FBtr0088718 8718015|8718015|8718015 8718693|8718693|8718693 2R - 8718021 8718126 3'utr CG14767 FlyBase G21051.1 AATTATGATGATATTACCAGCAACAGTAAAGTTTTATGTGTGTACAATATCTAAATGTATACTGTGTACTAAATATGCAAAGATATTCGAATAAAAATTAGTTTAT 18 8718063 0.981216166 12 16 131 0.888888889 1.204119983 0.111111111 0 0 18 2 0 16 2R:8718021-8718126 6 CG14767 FBtr0088718|FBtr0088720|FBtr0088719 8718015|8718015|8718015 8718693|8718693|8718693 GATATT 6mer2-7 dme-miR-283-5p 2R - 8718028 8718074 3'utr CG14767 FlyBase G15957.1 AAATGTATACTGTGTACTAAATATGCAAAGATATTCGAATAAAAATT 9 8718061 0.988122105 7 8 67 0.857142857 1.079181246 0.142857143 0.555555556 0.714285714 9 2 0 12 2R:8718028-8718074 6 4 1811 FBgn0040777 1544.016667 90.17333333 137.3633333 0.002590646 0.044359012 0.029119852 18 16 17 0.1 dme-miR-11-3p 7mer-m1 TGTGATG 2R 8718382 8718388 - 2R_8718382_8718388_- 0.612069863 0.612070366 0.612070115 3.54E-07 CG14767 FBtr0088719|FBtr0088720|FBtr0088718 8718015|8718015|8718015 8718693|8718693|8718693 2R - 8718357 8718411 3'utr CG14767 FlyBase G21054.1 AAGCATTAAAGCCAAAAACATATTGTGATGCTGGCGAGGAAAGCATCAATTCCTT 27 8718389 0.962657695 7 26 131 0.96969697 1.204119983 0 0.185185185 0.333333333 27 0 1 32 2R:8718357-8718411 7 CG14767 FBtr0088718|FBtr0088720|FBtr0088719 8718015|8718015|8718015 8718693|8718693|8718693 TGTGATG 7mer-m1 dme-miR-11-3p 2R - 8718314 8718403 3'utr CG14767 FlyBase G15959.1 AAGCCAAAAACATATTGTGATGCTGGCGAGGAAAGCATCAATTCCTTTTCGGCCGCATCTGACCCGATTTTAGCTGCAACAATCTGTTAG 18 8718389 0.969018511 8 18 100 1 1.380211242 0 0.277777778 0.458333333 18 0 0 24 2R:8718314-8718403 7 17.5 1812 FBgn0040777 1544.016667 90.17333333 137.3633333 0.011334075 0.194070679 0.127399355 1 1 1 0.1 dme-miR-980-3p 7mer-A1 GCAGCTA 2R 8718575 8718581 - 2R_8718575_8718581_- 0.823341121 0.823336875 0.823338998 2.97E-06 CG14767 FBtr0088719|FBtr0088720|FBtr0088718 8718015|8718015|8718015 8718693|8718693|8718693 2R - 8718504 8718839 stop_codon CG14767 FlyBase G21056.1 TTGATGTAATCGGTGGCATTCCGCCTCCTCCGCCCTACAACGACGTTGCCGATGCCCAGGTGCAAGTGCCATCGCAATCGCCGCTGCATCGCCAGCCAAACATCCCGGGACAAGTATTCGGCGGACGCGACGAAAGCCAGGCTTAAACAGTACTTTCGACTGGATTGCTTCTCATGGCGAGTGGGTTGTGATCAGCGGTGACCACCCCTCTCCCATCCTCTTCTTGCCCAGATGATCTGGTTTCTGGTCCCTCATTTCGCAGCTATCATTCCCAGGCACACATACACCTTCTTAATGGTTGCTTCAATGTATTGAACACTGTTTTTAGAAAAACGA 272 8718598 0.999953233 54 254 2070 0.943396226 2 0.257861635 0.139705882 0.264150943 272 16 2 300 2R:8718504-8718839 7 CG14767 FBtr0088718|FBtr0088720|FBtr0088719 8718015|8718015|8718015 8718693|8718693|8718693 GCAGCTA 7mer-A1 dme-miR-980-3p 2R - 8718535 8718695 stop_codon CG14767 FlyBase G15961.1 AAACAGTACTTTCGACTGGATTGCTTCTCATGGCGAGTGGGTTGTGATCAGCGGTGACCACCCCTCTCCCATCCTCTTCTTGCCCAGATGATCTGGTTTCTGGTCCCTCATTTCGCAGCTATCATTCCCAGGCACACATACACCTTCTTAATGGTTGCTTC 149 8718598 0.984723318 28 135 1184 0.92173913 1.72427587 0.256521739 0.375838926 0.595652174 149 15 3 212 2R:8718535-8718695 7 48 1813 FBgn0040777 1544.016667 90.17333333 137.3633333 0.031087747 0.532308147 0.34943823 17 17 17 0.1 dme-miR-252-5p 6mer3-8 GTACTT 2R 8729550 8729555 - 2R_8729550_8729555_- 0.999999994 1 0.999999997 0 stmA FBtr0339341|FBtr0088715|FBtr0088716|FBtr0301639 8729500|8729500|8729500|8729500 8729726|8729726|8729726|8729726 2R - 8729539 8729575 3'utr stmA FlyBase G21064.1 TGTTAAACGACCCCGAATATGTACTTTGATTTAATTG 9 8729556 0.978764051 5 9 61 1 1.079181246 0 0.222222222 0.416666667 9 0 0 12 2R:8729539-8729575 6 stmA FBtr0339341|FBtr0088715|FBtr0088716|FBtr0301639 8729500|8729500|8729500|8729500 8729726|8729726|8729726|8729726 GTACTT 6mer3-8 dme-miR-252-5p 2R - 8729532 8729571 3'utr stmA FlyBase G15970.1 AAACGACCCCGAATATGTACTTTGATTTAATTGTTAGACA 11 8729557 0.977096948 5 10 72 0.933333333 1.146128036 0.066666667 0.181818182 0.4 11 1 0 14 2R:8729532-8729571 6 10 1814 FBgn0086784 383.3333333 16.82 25.63666667 0.026086957 0.594530321 0.390066311 1 2 1.5 0.1 dme-miR-1006-3p 7mer-m8 CGAATTT 2R 8729644 8729650 - 2R_8729644_8729650_- 0.661132266 0.661614704 0.661373485 0.000341108 stmA FBtr0339341|FBtr0088715|FBtr0088716|FBtr0301639 8729500|8729500|8729500|8729500 8729726|8729726|8729726|8729726 2R - 8729609 8729663 3'utr stmA FlyBase G21065.1 ATAGCTGAGAAAGCGAATTTGTTTGGTGTCTGTATGGAACTAGGTAAATCTTATT 18 8729633 0.989372297 7 17 171 1 1.301029996 0.3 0.111111111 0.2 18 0 0 20 2R:8729609-8729663 7 stmA FBtr0339341|FBtr0088715|FBtr0088716|FBtr0301639 8729500|8729500|8729500|8729500 8729726|8729726|8729726|8729726 CGAATTT 7mer-m8 dme-miR-1006-3p 2R - 8729611 8729673 3'utr stmA FlyBase G15971.1 ATGTATATCTATAGCTGAGAAAGCGAATTTGTTTGGTGTCTGTATGGAACTAGGTAAATCTTA 19 8729634 0.614548802 9 18 168 0.961538462 1.096910013 0.346153846 0.368421053 0.538461538 19 0 1 25 2R:8729611-8729673 7 10 1815 FBgn0086784 383.3333333 16.82 25.63666667 0.026086957 0.594530321 0.390066311 -17 -16 -16.5 0.1 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 8888480 8888486 - 2R_8888480_8888486_- 0.823337399 0.823209928 0.823273663 9.02E-05 CG8272 FBtr0088686|FBtr0330246 8888402|8888402 8889036|8888973 2R - 8888433 8888532 3'utr CG8272 FlyBase G21079.1 AACACATTGTGGTTATAATTACAACAAGTCACTGTCACTTCTTATAAGCTTTATACGATTAAATCGTTAACTGAACTCAACTGACTTAAGTGGTTAATGT 43 8888488 0.989829548 8 40 394 0.9 1.653212514 0.02 0.139534884 0.26 43 5 0 45 2R:8888433-8888532 7 CG8272 FBtr0088686|FBtr0330246 8888402|8888402 8889036|8888973 AGCTTTA 7mer-A1 dme-miR-79-3p 2R - 8888434 8888514 3'utr CG8272 FlyBase G15981.1 TTACAACAAGTCACTGTCACTTCTTATAAGCTTTATACGATTAAATCGTTAACTGAACTCAACTGACTTAAGTGGTTAATG 23 8888488 0.974498895 8 22 194 0.966666667 1.462397998 0.033333333 0.260869565 0.433333333 23 1 0 29 2R:8888434-8888514 7 23 1816 FBgn0033337 113.6666667 4.916666667 7.516666667 0.202346041 4.677966102 3.059866962 2 2 2 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2R 8888664 8888669 - 2R_8888664_8888669_- 0.730949445 0.730949445 0.730949445 0 CG8272 FBtr0088686|FBtr0088686|FBtr0088686|FBtr0330246|FBtr0330246|FBtr0330246 8888402|8888402|8888402|8888402|8888402|8888402 8889036|8889036|8889036|8888973|8888973|8888973 2R - 8888634 8888681 3'utr CG8272 FlyBase G21080.1 GATTGTAAATTATGTGATCGGTTGCCAAAATTAAAGTTGTTTGTTTGA 7 8888671 0.990116859 5 6 62 0.7 0.84509804 0.4 0.285714286 0.5 7 3 0 7 2R:8888634-8888681 6 CG8272 FBtr0088686|FBtr0088686|FBtr0088686|FBtr0330246|FBtr0330246|FBtr0330246 8888402|8888402|8888402|8888402|8888402|8888402 8889036|8889036|8889036|8888973|8888973|8888973 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 8888635 8888685 3'utr CG8272 FlyBase G15982.1 ACACGATTGTAAATTATGTGATCGGTTGCCAAAATTAAAGTTGTTTGTTTG 9 8888659 0.882667273 3 9 76 1 1.113943352 0.384615385 0.444444444 0.615384615 9 0 0 13 2R:8888635-8888685 6 8 1817 FBgn0033337 113.6666667 4.916666667 7.516666667 0.070381232 1.627118644 1.064301552 2 -10 -4 0.1 dme-miR-308-3p 8mer-m1 CTGTGATT 2R 8888717 8888724 - 2R_8888717_8888724_- 0.385023236 0.38555899 0.385291113 0.000378868 CG8272 FBtr0088686|FBtr0330246 8888402|8888402 8889036|8888973 2R - 8888683 8888747 3'utr CG8272 FlyBase G21081.1 ACGTAACGTTTGTCCGCATTCAACTGTGATTTTTTGTAAGGTACGAATCGTATGATAAGTGTACA 21 8888716 0.991413066 7 20 214 0.964285714 1.431363764 0.214285714 0.19047619 0.392857143 21 1 0 27 2R:8888683-8888747 8 CG8272 FBtr0088686|FBtr0330246 8888402|8888402 8889036|8888973 CTGTGATT 8mer-m1 dme-miR-308-3p 2R - 8888706 8888745 3'utr CG8272 FlyBase G15983.1 GTAACGTTTGTCCGCATTCAACTGTGATTTTTTGTAAGGT 13 8888716 0.596723692 6 12 139 0.823529412 1.146128036 0.529411765 0.153846154 0.352941176 13 3 0 14 2R:8888706-8888745 8 17 1818 FBgn0033337 113.6666667 4.916666667 7.516666667 0.149560117 3.457627119 2.261640798 -8 -8 -8 0.1 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 8888883 8888889 - 2R_8888883_8888889_- 0.605000235 0.615997328 0.610498782 0.007776124 CG8272 FBtr0088686|FBtr0330246 8888402|8888402 8889036|8888973 2R - 8888835 8888920 3'utr CG8272 FlyBase G21082.1 CGGCCCCCAGCAGCTGGGCTATAGTTGTGAAAGCTTTAGTCAAATATACATACATATACATATATATGCAGACATATATGTATTTG 34 8888896 0.974902213 7 33 272 0.925 1.568201724 0.175 0.147058824 0.275 34 3 0 37 2R:8888835-8888920 7 CG8272 FBtr0088686|FBtr0330246 8888402|8888402 8889036|8888973 AGCTTTA 7mer-A1 dme-miR-79-3p 2R - 8888873 8888911 3'utr CG8272 FlyBase G15984.2 GCAGCTGGGCTATAGTTGTGAAAGCTTTAGTCAAATATA 17 8888886 0.715333809 6 16 126 0.892857143 0.795880017 0.142857143 0.470588235 0.678571429 17 0 3 25 2R:8888873-8888911 7 22 1819 FBgn0033337 113.6666667 4.916666667 7.516666667 0.193548387 4.474576271 2.926829268 7 -3 2 0.1 dme-miR-970-3p 6mer3-8 TCTTAT 2R 8898620 8898625 + 2R_8898620_8898625_+ 0.999998206 0.996358859 0.998178533 0.002573374 Sec31 FBtr0088643|FBtr0345224|FBtr0339302|FBtr0088642 8898576|8898576|8898576|8898576 8898798|8898798|8898798|8898798 2R + 8898561 8898654 stop_codon Sec31 FlyBase G14093.1 AGTTGGTTCTGCGTTAGAGCCCCGTCGCCGGATCGCAGCCAAGTTCACTAAACGTATATTCTTATTGTGTCTTCAGATATCGATGTCAAACACA 12 8898604 0.964490998 7 12 66 1 1.176091259 0.333333333 0.25 0.4 12 0 0 15 2R:8898561-8898654 6 Sec31 FBtr0088642|FBtr0339302|FBtr0345224|FBtr0088643 8898576|8898576|8898576|8898576 8898798|8898798|8898798|8898798 TCTTAT 6mer3-8 dme-miR-970-3p 2R + 8898577 8898657 3'utr Sec31 FlyBase G10729.1 GAGCCCCGTCGCCGGATCGCAGCCAAGTTCACTAAACGTATATTCTTATTGTGTCTTCAGATATCGATGTCAAACACAAAA 11 8898619 0.985314224 6 10 84 0.882352941 1.176091259 0.117647059 0.363636364 0.588235294 11 2 0 15 2R:8898577-8898657 6 4.5 1820 FBgn0033339 1910.493333 56.05666667 85.60333333 0.002355413 0.080275911 0.052568046 16 1 8.5 0.1 dme-miR-79-3p 6mer3-8 TAGCTT 2R 8902618 8902623 + 2R_8902618_8902623_+ 0.999999985 0.999999514 0.99999975 3.54E-07 Ggamma1 FBtr0088645|FBtr0088647|FBtr0088646 8902559|8902559|8902559 8904791|8903130|8903130 2R + 8902559 8902708 stop_codon Ggamma1 FlyBase G14098.1 AAGGAGGCGGTGAGGATGGTCCGCCGTTGCCGAGGAGTCAGCGATCGCCGGCGGACGTTTAGCTTATTTTTAGTTTAGCAAGATGGATTAGGACGCAAACGTGTGTGGAGTACTACCCCAGTACCAGTATCAACGCCACCTGGAACAATA 38 8902643 0.854266942 17 35 211 0.958333333 1.662757832 0.291666667 0.157894737 0.333333333 38 2 0 46 2R:8902559-8902708 6 Ggamma1 FBtr0088646|FBtr0088647|FBtr0088645 8902559|8902559|8902559 8903130|8903130|8904791 TAGCTT 6mer3-8 dme-miR-79-3p 2R + 8902523 8902685 stop_codon Ggamma1 FlyBase G10733.1 ATCCCTTCCGCGAGAAGTCGTCCTGCACCGTTCTCTAAGGAGGCGGTGAGGATGGTCCGCCGTTGCCGAGGAGTCAGCGATCGCCGGCGGACGTTTAGCTTATTTTTAGTTTAGCAAGATGGATTAGGACGCAAACGTGTGTGGAGTACTACCCCAGTACCAG 23 8902644 0.969230001 14 21 118 0.825 0.740362689 0.225 0.391304348 0.65 23 2 5 33 2R:8902523-8902685 6 7.5 1821 FBgn0004921 4069.183333 548.5766667 837.3966667 0.001843122 0.013671744 0.008956329 -25 -26 -25.5 0.1 dme-miR-2b-2-5p 6mer2-7 TGAAGA 2R 8917772 8917777 + 2R_8917772_8917777_+ 0.984029866 0.999304429 0.991667147 0.010800703 lin FBtr0088651 8917676 8918234 2R + 8917743 8917912 3'utr lin FlyBase G14117.1 GGAATAGGAGAAACTAGCGCAAAATTCGATGAAGATGGAGGCCTTGTAGAATACGTGTATTAGCCGTAGGGACCAACCACTCCGACCATAACTCCGCACCCCGATCCAGTAGCGCGTCAACCGTAGTTAAGATCTTGCACCCTCTTCATCCGCTTCGCCCAGCAGGTCTT 34 8917778 0.965411869 16 33 165 0.973684211 1.267171728 0.131578947 0.117647059 0.210526316 34 0 1 37 2R:8917743-8917912 6 lin FBtr0088651 8917676 8918234 TGAAGA 6mer2-7 dme-miR-2b-2-5p 2R + 8917742 8917840 3'utr lin FlyBase G10749.1 TGGAATAGGAGAAACTAGCGCAAAATTCGATGAAGATGGAGGCCTTGTAGAATACGTGTATTAGCCGTAGGGACCAACCACTCCGACCATAACTCCGCA 20 8917778 0.932843332 9 20 73 1 1.531478917 0.323529412 0.5 0.705882353 20 0 0 34 2R:8917742-8917840 6 16.5 1822 FBgn0002552 347.3366667 11.45666667 17.51666667 0.047504343 1.440209485 0.941960038 -6 -6 -6 0.1 dme-miR-1008-3p 6mer3-8 AGCTGT 2R 8917932 8917937 + 2R_8917932_8917937_+ 1 1 1 0 lin FBtr0088651 8917676 8918234 2R + 8917920 8917962 3'utr lin FlyBase G14118.1 AGATACATACCCAGCTGTATGTAATTGTCATTGTAATTGTAAT 7 8917945 0.987816192 5 6 54 0.888888889 0.602059991 0 0.142857143 0.333333333 7 0 1 8 2R:8917920-8917962 6 lin FBtr0088651 8917676 8918234 AGCTGT 6mer3-8 dme-miR-1008-3p 2R + 8917919 8917970 3'utr lin FlyBase G10750.1 CAGATACATACCCAGCTGTATGTAATTGTCATTGTAATTGTAATGAGCATCA 6 8917944 0.982332006 4 6 47 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 2R:8917919-8917970 6 3.5 1823 FBgn0002552 347.3366667 11.45666667 17.51666667 0.010076679 0.305498982 0.199809705 -13 -12 -12.5 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 8948177 8948182 - 2R_8948177_8948182_- 0.661467148 0.997652119 0.829559634 0.237718693 CG33199 FBtr0307344|FBtr0088688 8947679|8948111 8948752|8948752 2R - 8948123 8948256 3'utr CG33199 FlyBase G21149.1 GCAAACCAGAGAAACGACTAAGTAGGGAGGTATAAAACAATAATGACTTCGTTGGACTGCAGATCGCCGAGCAGGCTGTGTCAGTATCCAAGAAACAAACTAGTTCTAGTTCCGTATTCAAATAAATGCATTAT 43 8948204 0.970685417 13 40 229 0.964285714 1.73239376 0.214285714 0.23255814 0.410714286 43 2 0 54 2R:8948123-8948256 6 CG33199 FBtr0088688|FBtr0307344 8948111|8947679 8948752|8948752 GCTGTG 6mer2-7 dme-miR-1008-3p 2R - 8948164 8948254 3'utr CG33199 FlyBase G16032.1 AAACCAGAGAAACGACTAAGTAGGGAGGTATAAAACAATAATGACTTCGTTGGACTGCAGATCGCCGAGCAGGCTGTGTCAGTATCCAAGA 31 8948205 0.974834666 10 24 152 0.853658537 1.06694679 0.195121951 0.258064516 0.43902439 31 4 2 35 2R:8948164-8948254 6 10.5 1824 FBgn0053199 249.6866667 28.21 43.29 0.042052706 0.372208437 0.242550243 22 23 22.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 8948437 8948443 - 2R_8948437_8948443_- 0.783768097 0.784375734 0.784071916 0.000429638 CG33199 FBtr0307344|FBtr0307344|FBtr0307344|FBtr0088688|FBtr0088688|FBtr0088688 8947679|8947679|8947679|8948111|8948111|8948111 8948752|8948752|8948752|8948752|8948752|8948752 2R - 8948365 8948623 3'utr CG33199 FlyBase G21151.1 TTGCCTAAGTTAAGTCACCCACTCACCACAGACCCAAGCGGAACTCGGACATGGAGGCTTGTTTTGTAATATTCTGTTCGATAAACTAACTGATCGGAGGCGAGGATCTGTGCGCATATATAGATATATTTTCTTGTTTACACATGCACACCATGCGTCGCCAACTAAAAGGAATAAATTTGTGATAAATCGTGTATGAAAAAAGCCCATCGGCAGACAAACTGAACGAAGGAGCGATGGAGGAGAAGATTCGCTGAGC 327 8948445 0.974889446 26 311 1938 0.957178841 1.625541087 0.173803526 0.171253823 0.317380353 327 9 8 380 2R:8948365-8948623 7 CG33199 FBtr0088688|FBtr0088688|FBtr0088688|FBtr0307344|FBtr0307344|FBtr0307344 8948111|8948111|8948111|8947679|8947679|8947679 8948752|8948752|8948752|8948752|8948752|8948752 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 8948357 8948594 3'utr CG33199 FlyBase G16033.1 AGACCCAAGCGGAACTCGGACATGGAGGCTTGTTTTGTAATATTCTGTTCGATAAACTAACTGATCGGAGGCGAGGATCTGTGCGCATATATAGATATATTTTCTTGTTTACACATGCACACCATGCGTCGCCAACTAAAAGGAATAAATTTGTGATAAATCGTGTATGAAAAAAGCCCATCGGCAGACAAACTGAACGAAGGAGCGATGGAGGAGAAGATTCGCTGAGCTTGCGGGA 273 8948445 0.999965586 23 265 1650 0.973614776 2.089905111 0.232189974 0.32967033 0.517150396 273 8 2 369 2R:8948357-8948594 7 228 1825 FBgn0053199 249.6866667 28.21 43.29 0.913144474 8.08224034 5.266805267 2 2 2 0.1 dme-miR-14-3p 8mer-A1 AAGACTGA 2R 8960983 8960990 + 2R_8960983_8960990_+ 0.643557546 0.643564934 0.64356124 5.23E-06 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 2R + 8960954 8961011 3'utr babo FlyBase G14181.1 TAACGAAAACAAAACAGTAAGACTATGTCAAGACTGAGCAGCAGTGGAAAGCAGTGAG 85 8960980 0.960788884 6 66 330 0.777777778 1.886490725 0.515151515 0.152941176 0.272727273 85 22 0 77 2R:8960954-8961011 8 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 AAGACTGA 8mer-A1 dme-miR-14-3p 2R + 8960958 8961007 3'utr babo FlyBase G10788.1 GAAAACAAAACAGTAAGACTATGTCAAGACTGAGCAGCAGTGGAAAGCAG 55 8960980 0.898445185 5 41 207 0.7625 1.30820858 0.6375 0.345454545 0.55 55 17 2 61 2R:8960958-8961007 8 64.5 1826 FBgn0011300 981.73 24.67666667 37.73 0.065700345 2.613805214 1.709514975 3 3 3 0.1 dme-miR-305-3p 6mer2-7 TGTGCC 2R 8961243 8961248 + 2R_8961243_8961248_+ 0.931252461 0.956508365 0.943880413 0.017858618 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 2R + 8961181 8961281 3'utr babo FlyBase G14182.1 ACGATTTGGCGCGCCGCCTGCTCACGAACAGCTTGCCATGCCCACGTCGCTATTGCTGCTGCTGTGCCTCTAAAACTTAATGAACACCACCCCTCTCCCAT 38 8961242 0.787956745 14 30 224 0.854166667 1.612783857 0.270833333 0.236842105 0.395833333 38 7 0 41 2R:8961181-8961281 6 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 TGTGCC 6mer2-7 dme-miR-305-3p 2R + 8961145 8961263 3'utr babo FlyBase G10789.1 AAATCGTAACGTAAAAAATAAAATGAAAGGAATCAAACGATTTGGCGCGCCGCCTGCTCACGAACAGCTTGCCATGCCCACGTCGCTATTGCTGCTGCTGTGCCTCTAAAACTTAATGA 25 8961243 0.976870605 12 24 156 0.96875 1.491361694 0.28125 0.28 0.4375 25 1 0 31 2R:8961145-8961263 6 17.5 1827 FBgn0011300 981.73 24.67666667 37.73 0.017825675 0.709171957 0.463821892 1 0 0.5 0.1 dme-miR-277-3p 6mer3-8 TGCATT 2R 8962154 8962159 + 2R_8962154_8962159_+ 0.999998625 0.999012448 0.999505536 0.000697349 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 2R + 8962108 8962178 3'utr babo FlyBase G14188.1 AGGTTTTGAAACTATTCCTGTAATTGTAAAATCTGTAAATAATCTGTGCATTCAGTGCATGCGAGTCAAAC 14 8962158 0.915220831 6 13 111 0.888888889 1.204119983 0.166666667 0.285714286 0.444444444 14 2 0 16 2R:8962108-8962178 6 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 TGCATT 6mer3-8 dme-miR-277-3p 2R + 8962153 8962214 3'utr babo FlyBase G10795.1 GTGCATTCAGTGCATGCGAGTCAAACAAAAAATGAGAGACAAGTTTCGAAGGATAGCGGACT 5 8962178 0.930321195 3 4 19 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 2R:8962153-8962214 6 4 1828 FBgn0011300 981.73 24.67666667 37.73 0.00407444 0.162096447 0.106016433 -4 -24 -14 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2R 8962265 8962270 + 2R_8962265_8962270_+ 0.999990212 0.999988132 0.999989172 1.48E-06 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 2R + 8962241 8962287 3'utr babo FlyBase G14189.1 AAGTTTAAGCCGAAAGTTGTTCTTAAGACTAACCCCCAATACAACCT 29 8962263 0.734127703 2 27 174 0.939393939 1.190331698 0.090909091 0.103448276 0.212121212 29 1 1 31 2R:8962241-8962287 6 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 AAGACT 6mer3-8 dme-miR-14-3p 2R + 8962241 8962289 3'utr babo FlyBase G10796.1 AAGTTTAAGCCGAAAGTTGTTCTTAAGACTAACCCCCAATACAACCTCC 13 8962263 0.735021929 2 13 86 1 1.301029996 0.05 0.384615385 0.6 13 0 0 20 2R:8962241-8962289 6 20 1829 FBgn0011300 981.73 24.67666667 37.73 0.0203722 0.810482237 0.530082163 2 2 2 0.1 dme-miR-965-3p 6mer3-8 TACGCT 2R 8969659 8969664 - 2R_8969659_8969664_- 1 1 1 0 CG8213 FBtr0339307|FBtr0273385|FBtr0273384 8969344|8969344|8969344 8971208|8970017|8970017 2R - 8969635 8969679 3'utr CG8213 FlyBase G21162.1 AGTCTGAATGAGAATTACGCTGATTGCAAAACGTAGGGATAAGAC 6 8969660 0.974791014 3 4 30 0.875 0.84509804 0.125 0.333333333 0.5 6 1 0 7 2R:8969635-8969679 6 CG8213 FBtr0273384|FBtr0339307|FBtr0273385 8969344|8969344|8969344 8970017|8971208|8970017 TACGCT 6mer3-8 dme-miR-965-3p 2R - 8969635 8969699 3'utr CG8213 FlyBase G16043.1 CGCGTGCCTAACACTTGTAGAGTCTGAATGAGAATTACGCTGATTGCAAAACGTAGGGATAAGAC 8 8969664 0.970780457 6 7 45 0.923076923 1.079181246 0.230769231 0.5 0.692307692 8 1 0 12 2R:8969635-8969699 6 5 1830 FBgn0033359 56 1.02 1.516666667 0.089285714 4.901960784 3.296703297 -4 0 -2 0.1 dme-miR-317-3p 8mer-A1 TGTGTTCA 2R 9097257 9097264 - 2R_9097257_9097264_- 0.631134043 0.631134255 0.631134149 2.12E-07 CG8078 FBtr0088631 9096929 9097310 2R - 9097242 9097293 3'utr CG8078 FlyBase G21171.1 ATTTATTCGTGATTCCACAAGATACAAATTGTGTTCATCCAAGGTTGCCAAC 11 9097265 0.790419418 2 11 93 1 1.079181246 0.166666667 0.090909091 0.166666667 11 0 0 12 2R:9097242-9097293 8 CG8078 FBtr0088631 9096929 9097310 TGTGTTCA 8mer-A1 dme-miR-317-3p 2R - 9097240 9097287 3'utr CG8078 FlyBase G16050.1 TCGTGATTCCACAAGATACAAATTGTGTTCATCCAAGGTTGCCAACCT 8 9097265 0.980348838 2 8 60 1 1.079181246 0.166666667 0.25 0.5 8 0 0 12 2R:9097240-9097287 8 9 1831 FBgn0033375 108.7933333 8.903333333 13.57 0.082725657 1.010857357 0.663227708 1 1 1 0.1 dme-miR-1002-5p 6mer3-8 CTACTT 2R 9105448 9105453 + 2R_9105448_9105453_+ 0.97964627 0.913959693 0.946802982 0.04644744 Vang FBtr0088566 9105387 9106796 2R + 9105427 9105480 stop_codon Vang FlyBase G14220.1 TAGCAACCAGACGCAATCGTCCTACTTGCATGTGTTTGTCTGATTTTCCCAGCT 10 9105449 0.965134252 5 10 56 1 1.113943352 0.230769231 0.3 0.461538462 10 0 0 13 2R:9105427-9105480 6 Vang FBtr0088566 9105387 9106796 CTACTT 6mer3-8 dme-miR-1002-5p 2R + 9105401 9105475 stop_codon Vang FlyBase G10814.1 GCCCCTCCAATCAACACTCCCACTCATAGCAACCAGACGCAATCGTCCTACTTGCATGTGTTTGTCTGATTTTCC 13 9105449 0.983290241 8 11 81 0.875 1.146128036 0.0625 0.333333333 0.5 12 2 0 14 2R:9105401-9105475 6 9 1832 FBgn0015838 1538.993333 53.09333333 81.26666667 0.005847979 0.169512808 0.110746514 -1 -1 -1 0.1 dme-miR-33-5p 6mer2-7 AATGCA 2R 9105994 9105999 + 2R_9105994_9105999_+ 0.627894766 0.626457627 0.627176196 0.001016254 Vang FBtr0330624|FBtr0088566 9105468|9105387 9106796|9106796 2R + 9105863 9106011 3'utr Vang FlyBase G14221.3 GTATCATCCTAAACCGACGCGAACATATCACACCCTTTGATAAGCAAACATGACTTACAAGTTCCCAAAGTATTAATTATAAGAATGATGGTTTGGCTTGCCGAACCGCGATCTTCAGATATCAACTCTTAAATGCAGCTCTTTTATAC 125 9105996 0.869110199 27 113 912 0.918367347 1.528273777 0.108843537 0.177419355 0.306122449 124 9 3 135 2R:9105863-9106011 6 Vang FBtr0330624|FBtr0088566 9105468|9105387 9106796|9106796 AATGCA 6mer2-7 dme-miR-33-5p 2R + 9105695 9106021 3'utr Vang FlyBase G10815.1 AAGTTTAGAAAGGAAAAGTTGTTGTGAGAACAAAATGTCTAGGCAGGCCTCAGCAGCTAAATTTTGATCTTGTAACAAATGATTATTAGATGAGAAGGCAACGTACTTATCAGTGCTAAACTTGAACTTATGACCCGAATATCAAGAAACAATGCTCAAAAGCCCAGTGTATCATCCTAAACCGACGCGAACATATCACACCCTTTGATAAGCAAACATGACTTACAAGTTCCCAAAGTATTAATTATAAGAATGATGGTTTGGCTTGCCGAACCGCGATCTTCAGATATCAACTCTTAAATGCAGCTCTTTTATACACGATTTTTA 161 9105996 0.896804901 44 142 1132 0.902542373 1.425289616 0.199152542 0.347826087 0.555084746 161 16 7 213 2R:9105695-9106021 6 69 1833 FBgn0015838 1538.993333 53.09333333 81.26666667 0.044834502 1.299598192 0.849056604 -2 -2 -2 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 2R 9106357 9106363 + 2R_9106357_9106363_+ 0.618854821 0.620204056 0.619529438 0.000954099 Vang FBtr0330624|FBtr0088566 9105468|9105387 9106796|9106796 2R + 9106296 9106373 3'utr Vang FlyBase G14224.1 CAACTATAACTCGAATGCAACTGATGACAAATACATAATATAAGCGAAGACTGCCTGAATATGCATTTTATACACACA 50 9106352 0.767491 11 47 248 0.964912281 1.740362689 0.070175439 0.14 0.245614035 50 2 0 55 2R:9106296-9106373 7 Vang FBtr0330624|FBtr0088566 9105468|9105387 9106796|9106796 TGCATTT 7mer-m8 dme-miR-277-3p 2R + 9106301 9106525 3'utr Vang FlyBase G10818.1 ATAACTCGAATGCAACTGATGACAAATACATAATATAAGCGAAGACTGCCTGAATATGCATTTTATACACACAAATTGCCAACAGCCACTAGCAGGTGTATGTACTAGCCTGTGCATAGCAACCACATATATACAAAAACTCGTGTATTTTTAGAGACAAAATTATAGTGATAAGGACCCGAATTCGTATTCGAACATGTGTACGTTCCAGTGAACCCAATCTAT 93 9106351 0.969636089 28 88 494 0.937931034 2.133538908 0.172413793 0.397849462 0.613793103 93 9 0 136 2R:9106301-9106525 7 16.5 1834 FBgn0015838 1538.993333 53.09333333 81.26666667 0.010721294 0.310773481 0.203035275 5 6 5.5 0.1 dme-miR-184-5p 8mer-m1 TGATAAGG 2R 9106469 9106476 + 2R_9106469_9106476_+ 0.609487162 0.575991123 0.592739143 0.023685319 Vang FBtr0330624|FBtr0088566 9105468|9105387 9106796|9106796 2R + 9106391 9106540 3'utr Vang FlyBase G14225.1 AGCAGGTGTATGTACTAGCCTGTGCATAGCAACCACATATATACAAAAACTCGTGTATTTTTAGAGACAAAATTATAGTGATAAGGACCCGAATTCGTATTCGAACATGTGTACGTTCCAGTGAACCCAATCTATATATACATACATATA 74 9106465 0.751833902 22 68 433 0.929292929 1.486666573 0.212121212 0.256756757 0.444444444 74 5 2 92 2R:9106391-9106540 8 Vang FBtr0330624|FBtr0088566 9105468|9105387 9106796|9106796 TGATAAGG 8mer-m1 dme-miR-184-5p 2R + 9106301 9106525 3'utr Vang FlyBase G10818.1 ATAACTCGAATGCAACTGATGACAAATACATAATATAAGCGAAGACTGCCTGAATATGCATTTTATACACACAAATTGCCAACAGCCACTAGCAGGTGTATGTACTAGCCTGTGCATAGCAACCACATATATACAAAAACTCGTGTATTTTTAGAGACAAAATTATAGTGATAAGGACCCGAATTCGTATTCGAACATGTGTACGTTCCAGTGAACCCAATCTAT 93 9106465 0.969636089 28 88 494 0.937931034 2.133538908 0.172413793 0.397849462 0.613793103 93 9 0 136 2R:9106301-9106525 8 27.5 1835 FBgn0015838 1538.993333 53.09333333 81.26666667 0.017868823 0.517955801 0.338392125 4 4 4 0.1 dme-miR-190-5p 6mer3-8 ACATAT 2R 9119425 9119430 + 2R_9119425_9119430_+ 0.999999924 0.99994203 0.999970977 4.09E-05 Su(var)2-10 FBtr0088576|FBtr0088571|FBtr0088574 9119072|9119072|9119072 9120105|9120105|9119480 2R + 9119395 9119448 5'utr Su(var)2-10 FlyBase G14242.1 ATTGTCCAAAATGAAAATTACATATATGTTACATATGATTCTGACTTCATCATC 7 9119430 0.98713905 6 7 62 1 0.954242509 0 0.142857143 0.333333333 7 0 0 9 2R:9119395-9119448 6 Su(var)2-10 FBtr0088571|FBtr0088574|FBtr0088576 9119072|9119072|9119072 9120105|9119480|9120105 ACATAT 6mer3-8 dme-miR-190-5p 2R + 9119420 9119451 5'utr Su(var)2-10 FlyBase G10838.1 ATGTTACATATGATTCTGACTTCATCATCACT 5 9119442 0.94091494 3 5 38 1 0.84509804 0 0.4 0.571428571 5 0 0 7 2R:9119420-9119451 6 4.5 1836 FBgn0003612 1532.696667 79.66 122.23 0.002936002 0.056490083 0.036815839 -5 -17 -11 0.1 dme-miR-970-3p 7mer-A1 CTTATGA 2R 9119488 9119494 + 2R_9119488_9119494_+ 0.823179481 0.822167738 0.82267361 0.000715451 Su(var)2-10 FBtr0088576|FBtr0088571 9119072|9119072 9120105|9120105 2R + 9119449 9119506 5'utr-coding Su(var)2-10 FlyBase G14243.1 ACTTATTGTTATTCAAATATAATTAGGTCCCCGATTCCGCTTATGACTTTAGTGCATC 65 9119483 0.97968658 8 63 434 0.986666667 1.86923172 0.173333333 0.153846154 0.266666667 65 1 0 74 2R:9119449-9119506 7 Su(var)2-10 FBtr0088571|FBtr0088576 9119072|9119072 9120105|9120105 CTTATGA 7mer-A1 dme-miR-970-3p 2R + 9119464 9119504 5'utr-coding Su(var)2-10 FlyBase G10839.1 AATATAATTAGGTCCCCGATTCCGCTTATGACTTTAGTGCA 56 9119483 0.837976182 3 55 363 0.975308642 1.897627091 0.296296296 0.339285714 0.543209877 56 2 0 79 2R:9119464-9119504 7 59.5 1837 FBgn0003612 1532.696667 79.66 122.23 0.038820467 0.746924429 0.486787204 5 5 5 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 2R 9119625 9119630 + 2R_9119625_9119630_+ 0.971151637 0.877092542 0.924122089 0.066509827 Su(var)2-10 FBtr0088576|FBtr0088571 9119072|9119072 9120105|9120105 2R + 9119574 9119647 3'utr Su(var)2-10 FlyBase G14244.1 ATGTTTATGTTTCAAAAAAGTGACCAGAAGGGCTATTTATCATGATAATTTTGTGTTAGATCTACGGAGTCCAG 7 9119623 0.986005129 6 7 61 1 0.84509804 0.714285714 0 0 7 0 0 7 2R:9119574-9119647 6 Su(var)2-10 FBtr0088571|FBtr0088576 9119072|9119072 9120105|9120105 TGTGTT 6mer3-8 dme-miR-317-3p 2R + 9119579 9119646 3'utr Su(var)2-10 FlyBase G10840.1 TATGTTTCAAAAAAGTGACCAGAAGGGCTATTTATCATGATAATTTTGTGTTAGATCTACGGAGTCCA 11 9119610 0.968500286 6 10 61 1 1.255272505 0.055555556 0.363636364 0.611111111 11 0 0 18 2R:9119579-9119646 6 3.5 1838 FBgn0003612 1532.696667 79.66 122.23 0.002283557 0.043936731 0.028634541 2 15 8.5 0.1 dme-miR-317-3p 7mer-A1 GTGTTCA 2R 9119801 9119807 + 2R_9119801_9119807_+ 0.793341211 0.823198321 0.808269766 0.021112158 Su(var)2-10 FBtr0088576|FBtr0088571 9119072|9119072 9120105|9120105 2R + 9119673 9119874 3'utr Su(var)2-10 FlyBase G14245.1 GTAAAATCCCCTAGCCAAAACTTGTATAGACTAAGTAGGCTATAAATTGACTCTATCCGCTTTCGTTGCTTGTATTGTAGGTGGTAATGTTTTTAAAAAACCTCAGAAAGCGGAGGAGCTTTACAAGCGTGTTCATTTAGGAGTTTGGCTGCGCCCACGGTATGTTTTCCGTCGATCGATTGTGAAATGGTTCGGGTTTGGA 73 9119808 0.908630734 21 70 597 0.948979592 1.968482949 0.469387755 0.232876712 0.428571429 73 5 0 93 2R:9119673-9119874 7 Su(var)2-10 FBtr0088571|FBtr0088576 9119072|9119072 9120105|9120105 GTGTTCA 7mer-A1 dme-miR-317-3p 2R + 9119772 9119821 3'utr Su(var)2-10 FlyBase G10842.1 ACCTCAGAAAGCGGAGGAGCTTTACAAGCGTGTTCATTTAGGAGTTTGGC 26 9119808 0.983712664 5 25 196 0.970588235 1.51851394 0.323529412 0.307692308 0.470588235 26 1 0 33 2R:9119772-9119821 7 32 1839 FBgn0003612 1532.696667 79.66 122.23 0.020878234 0.401707256 0.261801522 -7 -7 -7 0.1 dme-miR-282-5p 8mer-A1 AGAGGCTA 2R 9120674 9120681 + 2R_9120674_9120681_+ 0.63790686 0.63790686 0.63790686 0 Su(var)2-10 FBtr0088577|FBtr0088570|FBtr0088575 9120537|9120537|9120537 9120816|9120816|9120816 2R + 9120631 9120719 3'utr Su(var)2-10 FlyBase G14248.1 TTTTCGGTTTCACTTCCGGTGGCGCACGGCCACATATTACCTTAGAGGCTATTCTTCGGCGTTCGATTCGCCGCCTTGCATCACCTCAT 36 9120673 0.985591309 9 35 289 0.953488372 1.612783857 0.069767442 0.194444444 0.325581395 36 2 0 41 2R:9120631-9120719 8 Su(var)2-10 FBtr0088575|FBtr0088570|FBtr0088577 9120537|9120537|9120537 9120816|9120816|9120816 AGAGGCTA 8mer-A1 dme-miR-282-5p 2R + 9120656 9120695 3'utr Su(var)2-10 FlyBase G10846.1 ACGGCCACATATTACCTTAGAGGCTATTCTTCGGCGTTCG 20 9120673 0.771858149 4 17 148 0.857142857 1.380211242 0.142857143 0.35 0.535714286 20 4 0 24 2R:9120656-9120695 8 25 1840 FBgn0003612 1532.696667 79.66 122.23 0.01631112 0.313833794 0.204532439 1 1 1 0.1 dme-miR-1012-3p 7mer-m8 TTGACTA 2R 9121505 9121511 + 2R_9121505_9121511_+ 0.537645659 0.590364403 0.564005031 0.03727775 Su(var)2-10 FBtr0302506|FBtr0343996 9121130|9121130 9121610|9121610 2R + 9121494 9121534 3'utr Su(var)2-10 FlyBase G14252.1 TGAACAATGCTTTGACTATGACATGATGCAAACCCCCTAAA 38 9121516 0.767068584 7 35 258 0.902439024 1.091080469 0.024390244 0.078947368 0.146341463 38 2 2 37 2R:9121494-9121534 7 Su(var)2-10 FBtr0343996|FBtr0302506 9121130|9121130 9121610|9121610 TTGACTA 7mer-m8 dme-miR-1012-3p 2R + 9121494 9121551 3'utr Su(var)2-10 FlyBase G10848.1 TGAACAATGCTTTGACTATGACATGATGCAAACCCCCTAAATATCTGAACGAACAAAT 17 9121517 0.980262531 5 15 108 0.846153846 1.342422681 0.076923077 0.470588235 0.653846154 17 4 0 22 2R:9121494-9121551 7 26 1841 FBgn0003612 1532.696667 79.66 122.23 0.016963565 0.326387145 0.212713736 -11 -12 -11.5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2R 9121859 9121865 + 2R_9121859_9121865_+ 0.454235961 0.473965274 0.464100618 0.013950722 Su(var)2-10 FBtr0302507|FBtr0302505 9121805|9121805 9122000|9122000 2R + 9121843 9121930 3'utr Su(var)2-10 FlyBase G14254.1 AATATCATTAGGCGACCCAAAGAATTAGACTTGGCCTGTTAAGTTAACTTAATGCGCCACAAGTGTATTGTAGCATTCTAAGTATGTT 436 9121867 0.86279952 14 433 2817 0.993914807 2.389166084 0.103448276 0.121559633 0.223123732 436 2 1 490 2R:9121843-9121930 7 Su(var)2-10 FBtr0302507|FBtr0302505 9121805|9121805 9122000|9122000 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 9121842 9121926 3'utr Su(var)2-10 FlyBase G10849.1 CAATATCATTAGGCGACCCAAAGAATTAGACTTGGCCTGTTAAGTTAACTTAATGCGCCACAAGTGTATTGTAGCATTCTAAGTA 222 9121867 0.857190383 11 215 1405 0.961538462 2.034762106 0.127218935 0.36036036 0.579881657 222 11 2 325 2R:9121842-9121926 7 309.5 1842 FBgn0003612 1532.696667 79.66 122.23 0.201931672 3.885262365 2.532111593 -8 -8 -8 0.1 dme-miR-965-3p 6mer3-8 TACGCT 2R 9123400 9123405 - 2R_9123400_9123405_- 0.999999952 0.99999997 0.999999961 0 CG18659 FBtr0339371|FBtr0306382|FBtr0339372|FBtr0088626|FBtr0306381|FBtr0302497|FBtr0302498 9123302|9123302|9123302|9123302|9123302|9123302|9123302 9127111|9125499|9123701|9123701|9127111|9123701|9123701 2R - 9123308 9123462 3'utr CG18659 FlyBase G21196.1 TTTAACAATTGCATGAATCGGAACTCTCGCTAACTACGCATACTTACATACATATTGTACGCTGGACTTCCAAATCAAAAGACACAAGAATCTAGAGTAGCATGAATTTAAGCCAATTAGCCTAACAAATTACCAATAAATATAAAATAAATTCC 113 9123396 0.962317556 17 109 561 0.970588235 1.819543936 0.139705882 0.168141593 0.308823529 113 3 1 132 2R:9123308-9123462 6 CG18659 FBtr0339372|FBtr0306382|FBtr0339371|FBtr0302498|FBtr0302497|FBtr0306381|FBtr0088626 9123302|9123302|9123302|9123302|9123302|9123302|9123302 9123701|9125499|9127111|9123701|9123701|9127111|9123701 TACGCT 6mer3-8 dme-miR-965-3p 2R - 9123320 9123459 3'utr CG18659 FlyBase G16073.1 AACAATTGCATGAATCGGAACTCTCGCTAACTACGCATACTTACATACATATTGTACGCTGGACTTCCAAATCAAAAGACACAAGAATCTAGAGTAGCATGAATTTAAGCCAATTAGCCTAACAAATTACCAATAAATAT 87 9123399 0.964967362 16 85 445 0.967479675 1.598425707 0.097560976 0.310344828 0.512195122 87 2 2 119 2R:9123320-9123459 6 77 1843 FBgn0027561 809.6966667 28.81666667 43.97666667 0.095097341 2.672064777 1.750928523 -9 -6 -7.5 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 2R 9123645 9123651 - 2R_9123645_9123651_- 0.520666937 0.520616298 0.520641617 3.58E-05 CG18659 FBtr0339371|FBtr0306382|FBtr0339372|FBtr0088626|FBtr0306381|FBtr0302497|FBtr0302498 9123302|9123302|9123302|9123302|9123302|9123302|9123302 9127111|9125499|9123701|9123701|9127111|9123701|9123701 2R - 9123591 9123681 3'utr CG18659 FlyBase G21197.2 AACCTGCATCAAATATGATACCAAAATAAGTGTGATTGATAGATTGTGTTGTAAATAGCTAGGAGAGATAGGCAAAATCAAGGATGGGAGA 442 9123645 0.950367801 19 415 2369 0.941287879 1.617175143 0.115530303 0.167420814 0.303030303 442 20 11 497 2R:9123591-9123681 7 CG18659 FBtr0339372|FBtr0306382|FBtr0339371|FBtr0302498|FBtr0302497|FBtr0306381|FBtr0088626 9123302|9123302|9123302|9123302|9123302|9123302|9123302 9123701|9125499|9127111|9123701|9123701|9127111|9123701 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 9123591 9123690 3'utr CG18659 FlyBase G16074.3 TGGTCAGATAACCTGCATCAAATATGATACCAAAATAAGTGTGATTGATAGATTGTGTTGTAAATAGCTAGGAGAGATAGGCAAAATCAAGGATGGGAGA 346 9123645 0.926405101 19 322 2065 0.931863727 1.588271707 0.162324649 0.341040462 0.543086172 346 23 11 465 2R:9123591-9123690 7 242 1844 FBgn0027561 809.6966667 28.81666667 43.97666667 0.298877357 8.397917872 5.502918214 -6 -6 -6 0.1 dme-bantam-3p 6mer3-8 TGATCT 2R 9124111 9124116 - 2R_9124111_9124116_- 0.915263485 0.987568429 0.951415957 0.051127285 CG18659 FBtr0339371|FBtr0306382|FBtr0306381 9123302|9123302|9123302 9127111|9125499|9127111 2R - 9124007 9124142 3'utr CG18659 FlyBase G21199.1 CAGCAGCCACTGGAGGACAGCATGAATGATCTGATATCGCTGGACGATAGCAACAACACCAGCTTCGACCTGGAGGACTTCGATCCGCTCAATCAGAATGCTCGTCCGTTGCCGCCGCTCAGCACGGCATTTGCCA 111 9124116 0.96974228 14 107 605 0.95620438 1.8162413 0.299270073 0.189189189 0.343065693 111 5 1 131 2R:9124007-9124142 6 CG18659 FBtr0306382|FBtr0339371|FBtr0306381 9123302|9123302|9123302 9125499|9127111|9127111 TGATCT 6mer3-8 dme-bantam-3p 2R - 9124093 9124144 3'utr CG18659 FlyBase G16078.1 AACAGCAGCCACTGGAGGACAGCATGAATGATCTGATATCGCTGGACGATAG 30 9124116 0.891078334 2 28 169 0.952380952 1.602059991 0.452380952 0.266666667 0.476190476 30 2 0 40 2R:9124093-9124144 6 55 1845 FBgn0027561 809.6966667 28.81666667 43.97666667 0.067926672 1.908617698 1.250663231 0 0 0 0.1 dme-miR-278-3p 7mer-A1 CCACCGA 2R 9124998 9125004 - 2R_9124998_9125004_- 0.822502507 0.822558749 0.822530628 3.97E-05 CG18659 FBtr0339371|FBtr0306382|FBtr0306381 9123302|9123302|9123302 9127111|9125499|9127111 2R - 9124877 9125070 5'utr CG18659 FlyBase G21201.1 AGACCGCGTCAGCCCCTGCCTACCGCCGATTCCAGCAGCTTTGATAGTCCGCCGGACGTACAATCTCCACCGATTCCGCCCCGGAGGCAGGGCAGCTCGAATGCGATTGTGGCGGCCACGGCTGCAGCCGTCAGTGCAGAGATTAGCAAACTGGAACGTAACTGCTGGAAGGACGAGCCCGGAAATGATTCTGT 488 9124997 0.895668955 13 487 1430 0.990654206 2.72427587 0.011214953 0.081967213 0.162616822 488 5 0 530 2R:9124877-9125070 7 CG18659 FBtr0306382|FBtr0339371|FBtr0306381 9123302|9123302|9123302 9125499|9127111|9127111 CCACCGA 7mer-A1 dme-miR-278-3p 2R - 9124953 9125011 5'utr CG18659 FlyBase G16081.1 ACAATCTCCACCGATTCCGCCCCGGAGGCAGGGCAGCTCGAATGCGATTGTGGCGGCCA 160 9124997 0.895102274 3 156 462 0.973568282 1.566241023 0.013215859 0.35 0.54185022 160 1 5 221 2R:9124953-9125011 7 314 1846 FBgn0027561 809.6966667 28.81666667 43.97666667 0.387799546 10.89647195 7.14015008 -7 -7 -7 0.1 dme-miR-1008-3p 7mer-A1 GCTGTGA 2R 9125426 9125432 - 2R_9125426_9125432_- 0.80540333 0.80706356 0.806233445 0.001174009 CG18659 FBtr0306382 9123302 9125499 2R - 9125399 9125482 5'utr CG18659 FlyBase G21203.1 AGCCGTTCACATGCTTGCCGCTAAGCTAAATCGACCACTCATCTCGATGTGCTGTGAATTTATGTTGTTCTCATGCTCTTCTTG 165 9125435 0.987219047 8 162 1432 0.989189189 2.26245109 0.064864865 0.109090909 0.205405405 165 2 0 183 2R:9125399-9125482 7 CG18659 FBtr0306382 9123302 9125499 GCTGTGA 7mer-A1 dme-miR-1008-3p 2R - 9125385 9125483 5'utr CG18659 FlyBase G16083.1 CAGCCGTTCACATGCTTGCCGCTAAGCTAAATCGACCACTCATCTCGATGTGCTGTGAATTTATGTTGTTCTCATGCTCTTCTTGTTTTTGTTTCCTTG 142 9125435 0.988007058 9 138 1247 0.977578475 1.736396502 0.058295964 0.457746479 0.65470852 142 2 3 218 2R:9125385-9125483 7 147.5 1847 FBgn0027561 809.6966667 28.81666667 43.97666667 0.182166984 5.118565645 3.354051391 3 3 3 0.1 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 2R 9125683 9125689 - 2R_9125683_9125689_- 0.503209152 0.620145172 0.561677162 0.082686239 CG18659 FBtr0339371|FBtr0306381 9123302|9123302 9127111|9127111 2R - 9125553 9125720 5'utr CG18659 FlyBase G21204.1 AGCCGAACGGCCATGCGTACGGTGCGAGTGCTGGTGCTCATTATGGTCATCATCTCGCTGCGTCTCCTGCTGTTAGCTCGGCGAGCTCGCTCTGCTCATCTTCGGAGATGAACCTGTCGCAGGAACTGCAGAACCATCCGCTTTTCAAGACGCCGGCAGTGGACCGCA 34 9125679 0.981685229 17 29 209 0.85 0.929418926 0.225 0.176470588 0.3 34 3 3 34 2R:9125553-9125720 7 CG18659 FBtr0339371|FBtr0306381 9123302|9123302 9127111|9127111 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 2R - 9125679 9125707 5'utr CG18659 FlyBase G16085.1 TGCGTACGGTGCGAGTGCTGGTGCTCATT 8 9125686 0.753738528 3 8 42 1 1.113943352 0.153846154 0.5 0.692307692 8 0 0 13 2R:9125679-9125707 7 8 1848 FBgn0027561 809.6966667 28.81666667 43.97666667 0.009880243 0.27761712 0.181914652 -10 -3 -6.5 0.1 dme-miR-184-3p 6mer2-7 CCGTCC 2R 9125754 9125759 - 2R_9125754_9125759_- 0.998060478 0.998382087 0.998221283 0.000227406 CG18659 FBtr0339371|FBtr0306381 9123302|9123302 9127111|9127111 2R - 9125738 9125801 5'utr CG18659 FlyBase G21205.1 GATCCGGCGCCAGGGAGCCGCGGGAGTTCCTGCGACGCGGTCCCGTCCCGCTGGCCATGTCTAG 10 9125761 0.944864259 3 9 37 1 1 0.6 0 0 10 0 0 10 2R:9125738-9125801 6 CG18659 FBtr0339371|FBtr0306381 9123302|9123302 9127111|9127111 CCGTCC 6mer2-7 dme-miR-184-3p 2R - 9125726 9125777 5'utr CG18659 FlyBase G16086.1 AGTTCCTGCGACGCGGTCCCGTCCCGCTGGCCATGTCTAGCTCGAGCAGCCA 6 9125761 0.942814823 2 5 23 0.777777778 0.84509804 0 0.5 0.666666667 6 2 0 7 2R:9125726-9125777 6 7 1849 FBgn0027561 809.6966667 28.81666667 43.97666667 0.008645213 0.24291498 0.15917532 2 2 2 0.1 dme-miR-995-5p 7mer-A1 ATTCGGA 2R 9125942 9125948 - 2R_9125942_9125948_- 0.782911747 0.781874483 0.782393115 0.000733411 CG18659 FBtr0339371|FBtr0306381 9123302|9123302 9127111|9127111 2R - 9125919 9125987 5'utr CG18659 FlyBase G21207.1 GTGGCACGCACTTCCACTTTGGACTTGGCTCCCCGAATCATTCGGATCGTCCTGACGGCACCAGCGGAG 19 9125968 0.973974379 8 19 117 1 1.322219295 0.238095238 0.105263158 0.19047619 19 0 0 21 2R:9125919-9125987 7 CG18659 FBtr0339371|FBtr0306381 9123302|9123302 9127111|9127111 ATTCGGA 7mer-A1 dme-miR-995-5p 2R - 9125918 9125972 5'utr CG18659 FlyBase G16087.1 ACTTTGGACTTGGCTCCCCGAATCATTCGGATCGTCCTGACGGCACCAGCGGAGG 9 9125935 0.965487522 3 9 49 1 1.146128036 0 0.444444444 0.642857143 9 0 0 14 2R:9125918-9125972 7 9 1850 FBgn0027561 809.6966667 28.81666667 43.97666667 0.011115274 0.31231926 0.204653983 20 -13 3.5 0.1 dme-miR-283-5p 6mer3-8 TGATAT 2R 9135184 9135189 + 2R_9135184_9135189_+ 0.602203908 0.747825527 0.675014717 0.102970021 Hydr1 FBtr0300180|FBtr0339361|FBtr0339360|FBtr0302496|FBtr0088580 9135052|9135052|9135052|9135052|9135052 9135453|9135453|9135453|9135453|9135453 2R + 9135074 9135254 3'utr Hydr1 FlyBase G14265.1 GGTCGGTCGGTCCGCTAGTCTAGTTCAGTTTTTGTCCAGTTGAACACGTAGATATACGAGAATGTTTGTATTCCGATAGATTGCCGTCGGCGAAGACTCTTGTACACATGTGATATGAAACGTTGATCAAAATCCAAAGTGTTGTTATACTTATATACAGCGAACAGGGAACCAAATTATC 55 9135174 0.978282638 20 51 338 0.930555556 1.826074803 0.208333333 0.236363636 0.416666667 55 5 0 67 2R:9135074-9135254 6 Hydr1 FBtr0088580|FBtr0302496|FBtr0339360|FBtr0339361|FBtr0300180 9135052|9135052|9135052|9135052|9135052 9135453|9135453|9135453|9135453|9135453 TGATAT 6mer3-8 dme-miR-283-5p 2R + 9135130 9135221 3'utr Hydr1 FlyBase G10857.1 CGAGAATGTTTGTATTCCGATAGATTGCCGTCGGCGAAGACTCTTGTACACATGTGATATGAAACGTTGATCAAAATCCAAAGTGTTGTTAT 35 9135173 0.928514117 14 33 199 0.942307692 1.389166084 0.173076923 0.314285714 0.538461538 35 2 1 49 2R:9135130-9135221 6 21 1851 FBgn0033382 206.7266667 10.77333333 16.46666667 0.101583411 1.949257426 1.275303644 10 11 10.5 0.1 dme-miR-190-5p 8mer-A1 ACATATCA 2R 9135308 9135315 + 2R_9135308_9135315_+ 0.612792003 0.611737838 0.612264921 0.000745432 Hydr1 FBtr0300180|FBtr0339361|FBtr0339360|FBtr0302496|FBtr0088580 9135052|9135052|9135052|9135052|9135052 9135453|9135453|9135453|9135453|9135453 2R + 9135284 9135320 3'utr Hydr1 FlyBase G14266.1 TACTCTTAGATCGTGACTTTAGTGACATATCAGGTTG 6 9135302 0.820679188 4 6 51 1 0.903089987 0.5 0.333333333 0.5 6 0 0 8 2R:9135284-9135320 8 Hydr1 FBtr0088580|FBtr0302496|FBtr0339360|FBtr0339361|FBtr0300180 9135052|9135052|9135052|9135052|9135052 9135453|9135453|9135453|9135453|9135453 ACATATCA 8mer-A1 dme-miR-190-5p 2R + 9135288 9135338 3'utr Hydr1 FlyBase G10858.1 CTTAGATCGTGACTTTAGTGACATATCAGGTTGAAATTGCAAATAAGCTGT 5 9135302 0.97404207 5 5 28 1 0.903089987 0.125 0.6 0.75 5 0 0 8 2R:9135288-9135338 8 4 1852 FBgn0033382 206.7266667 10.77333333 16.46666667 0.019349221 0.371287129 0.24291498 6 6 6 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 2R 9142436 9142442 - 2R_9142436_9142442_- 0.436556418 0.441959219 0.439257819 0.003820357 shrb FBtr0088623 9142144 9142614 2R - 9142383 9142515 3'utr shrb FlyBase G21228.1 AGTTCGAAGCGAGGGAGAGAATACAAGGCATTAATTCCTTTGGCAATTCAACAAATGGTACATAAACTAGGAATGTGATTTTAAAATAAACGAAATAAGCATAGTCAGGCCTCACATGAGCAAAAGTAGGTAT 224 9142436 0.979468469 20 213 1477 0.944237918 2.103803721 0.081784387 0.169642857 0.308550186 224 14 1 254 2R:9142383-9142515 7 shrb FBtr0088623 9142144 9142614 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 9142369 9142611 3'utr shrb FlyBase G16102.1 AGAGAGCTATTGAAATCTCCTTACTGTTCTGAAGATACACCCTATCGTTTTTGTTTAATTTAATAATCAATACTGCTGTTAATTAAGCAAAATTTTAGTTCGAAGCGAGGGAGAGAATACAAGGCATTAATTCCTTTGGCAATTCAACAAATGGTACATAAACTAGGAATGTGATTTTAAAATAAACGAAATAAGCATAGTCAGGCCTCACATGAGCAAAAGTAGGTATCAACGTAGTTTCAT 202 9142436 0.98006837 31 192 1355 0.959866221 2.457881897 0.127090301 0.361386139 0.568561873 202 12 0 287 2R:9142369-9142611 7 156 1853 FBgn0086656 1721.663333 168.1933333 258.54 0.09061005 0.927504063 0.603388257 -6 -6 -6 0.1 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 2R 9162302 9162309 - 2R_9162302_9162309_- 0.625363544 0.625363889 0.625363717 2.83E-07 CG8046 FBtr0088621 9162035 9162726 2R - 9162278 9162328 3'utr CG8046 FlyBase G21237.1 ACTTTTGTACACCAACGATTGGTGCTAACTACGGATCTGAGCGAGCGCTAA 36 9162310 0.93375182 6 33 183 0.923076923 1.681241237 0.192307692 0.388888889 0.576923077 36 4 0 48 2R:9162278-9162328 8 CG8046 FBtr0088621 9162035 9162726 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 2R - 9162280 9162326 3'utr CG8046 FlyBase G16109.1 TTTTGTACACCAACGATTGGTGCTAACTACGGATCTGAGCGAGCGCT 31 9162310 0.824973097 7 30 164 0.951219512 1.113943352 0.195121951 0.290322581 0.463414634 31 0 2 39 2R:9162280-9162326 8 32.5 1854 FBgn0033388 91.66666667 5.236666667 8.053333333 0.354545455 6.206238065 4.035596026 1 1 1 0.1 dme-miR-932-5p 7mer-m8 GGAATTG 2R 9162508 9162514 - 2R_9162508_9162514_- 0.702929805 0.702915677 0.702922741 9.97E-06 CG8046 FBtr0088620|FBtr0088621 9162424|9162035 9162726|9162726 2R - 9162504 9162537 3'utr CG8046 FlyBase G21240.1 ACAAATCCAAGCGTAGAGTTTGGGGAATTGTGCT 9 9162517 0.671581557 3 8 42 0.916666667 1.041392685 0 0.222222222 0.416666667 9 1 0 11 2R:9162504-9162537 7 CG8046 FBtr0088620|FBtr0088621 9162424|9162035 9162726|9162726 GGAATTG 7mer-m8 dme-miR-932-5p 2R - 9162498 9162534 3'utr CG8046 FlyBase G16111.1 AATCCAAGCGTAGAGTTTGGGGAATTGTGCTTTGCCA 7 9162517 0.918261274 5 7 34 1 1.041392685 0 0.428571429 0.636363636 7 0 0 11 2R:9162498-9162534 7 8 1855 FBgn0033388 91.66666667 5.236666667 8.053333333 0.087272727 1.52768937 0.993377483 3 3 3 0.1 dme-miR-190-5p 6mer3-8 ACATAT 2R 9167792 9167797 - 2R_9167792_9167797_- 1 1 1 0 Rme-8 FBtr0088618|FBtr0339370 9167761|9167761 9168133|9168133 2R - 9167793 9167820 3'utr Rme-8 FlyBase G21252.1 TAGAGCATGCATAAAGTGATTAAACATA 14 9167811 0.631008551 3 14 61 1 1.255272505 0.111111111 0.142857143 0.333333333 14 0 0 18 2R:9167793-9167820 4 Rme-8 FBtr0339370|FBtr0088618 9167761|9167761 9168133|9168133 ACATAT 6mer3-8 dme-miR-190-5p 2R - 9167791 9167823 3'utr Rme-8 FlyBase G16119.1 AACTAGAGCATGCATAAAGTGATTAAACATATT 13 9167809 0.674595167 3 12 65 0.928571429 1.113943352 0.071428571 0.076923077 0.142857143 13 1 0 13 2R:9167791-9167823 6 12 1856 FBgn0015477 1892.016667 29.22333333 44.74333333 0.006342439 0.410630774 0.268196379 14 12 13 0.1 dme-miR-980-5p 6mer3-8 GAAAAA 2R 9167950 9167955 - 2R_9167950_9167955_- 0.998522487 0.970077543 0.984300015 0.020113652 Rme-8 FBtr0088618|FBtr0339370 9167761|9167761 9168133|9168133 2R - 9167923 9167969 3'utr Rme-8 FlyBase G21253.1 ATTGTACGTATCGTGAAAAAGGCTGGTACGGTAATCGTTAGCCAGCA 11 9167960 0.70838709 6 10 52 0.666666667 1 0.066666667 0.090909091 0.333333333 11 5 0 10 2R:9167923-9167969 6 Rme-8 FBtr0339370|FBtr0088618 9167761|9167761 9168133|9168133 GAAAAA 6mer3-8 dme-miR-980-5p 2R - 9167923 9167970 3'utr Rme-8 FlyBase G16120.1 AATTGTACGTATCGTGAAAAAGGCTGGTACGGTAATCGTTAGCCAGCA 5 9167960 0.98508412 3 4 31 0.857142857 0.77815125 0.142857143 0.2 0.428571429 5 1 0 6 2R:9167923-9167970 6 7 1857 FBgn0015477 1892.016667 29.22333333 44.74333333 0.003699756 0.239534618 0.156447888 5 5 5 0.1 dme-miR-932-5p 7mer-m8 GGAATTG 2R 9168028 9168034 - 2R_9168028_9168034_- 0.70297287 0.70297287 0.70297287 0 Rme-8 FBtr0088618|FBtr0339370 9167761|9167761 9168133|9168133 2R - 9167996 9168080 3'utr Rme-8 FlyBase G21254.1 CGCTAGCATGAAGCCTTCGATTGCCACGGAATCAGAAAACGGAAACGGAATTGCACGGGTTGCCCCCAATTATTGTATTAAACTT 20 9168009 0.70927178 8 19 119 0.952380952 1.301029996 0.095238095 0.05 0.095238095 20 1 0 20 2R:9167996-9168080 7 Rme-8 FBtr0339370|FBtr0088618 9167761|9167761 9168133|9168133 GGAATTG 7mer-m8 dme-miR-932-5p 2R - 9167989 9168042 3'utr Rme-8 FlyBase G16121.1 ACGGAAACGGAATTGCACGGGTTGCCCCCAATTATTGTATTAAACTTTATTTTA 8 9168030 0.979701294 5 6 43 0.769230769 1 0.307692308 0.5 0.692307692 8 3 0 10 2R:9167989-9168042 7 8 1858 FBgn0015477 1892.016667 29.22333333 44.74333333 0.004228293 0.27375385 0.178797586 -25 -4 -14.5 0.1 dme-miR-184-3p 6mer2-7 CCGTCC 2R 9178253 9178258 - 2R_9178253_9178258_- 0.998612776 0.978088832 0.988350804 0.01451266 ltd FBtr0346635|FBtr0089932|FBtr0089933|FBtr0339369|FBtr0346636|FBtr0089931|FBtr0089934 9177862|9177862|9177862|9177862|9177862|9177862|9177862 9178433|9178433|9178433|9178433|9178433|9178433|9178433 2R - 9178235 9178282 3'utr ltd FlyBase G21289.1 AGACTTAGTGTCATCCGTATCATCCCGTCCGTCTTTATCTTTAACACC 14 9178260 0.88381296 2 12 133 0.823529412 0.669006781 0.117647059 0.142857143 0.294117647 14 1 2 14 2R:9178235-9178282 6 ltd FBtr0089934|FBtr0346636|FBtr0089931|FBtr0089933|FBtr0339369|FBtr0346635|FBtr0089932 9177862|9177862|9177862|9177862|9177862|9177862|9177862 9178433|9178433|9178433|9178433|9178433|9178433|9178433 CCGTCC 6mer2-7 dme-miR-184-3p 2R - 9178233 9178270 3'utr ltd FlyBase G16143.1 ATCCGTATCATCCCGTCCGTCTTTATCTTTAACACCCC 9 9178260 0.973576267 3 9 59 1 1.176091259 0 0.666666667 0.8 9 0 0 15 2R:9178233-9178270 6 11.5 1859 FBgn0002567 31.33333333 1.753333333 2.75 0.367021277 6.558935361 4.181818182 2 2 2 0.1 dme-miR-276a-3p 7mer-A1 GTTCCTA 2R 9186782 9186788 - 2R_9186782_9186788_- 0.823346636 0.823346066 0.823346351 3.54E-07 CG8026 FBtr0302512|FBtr0088611 9186668|9186668 9186974|9188013 2R - 9186694 9186819 3'utr CG8026 FlyBase G21291.1 TGGTCTTTTCGTAGTAAGTAAAGTGATTGTTGTTCCTAAGTGTGGATCAGAATGGATTTGTGATTGAATTCAGACGAAAGTGTTACAATATACCTGTGAAATATAAGTCCATAGCCTCACTCTTGC 121 9186791 0.987379054 21 113 991 0.945205479 1.662757832 0.212328767 0.165289256 0.308219178 121 6 2 138 2R:9186694-9186819 7 CG8026 FBtr0302512|FBtr0088611 9186668|9186668 9186974|9188013 GTTCCTA 7mer-A1 dme-miR-276a-3p 2R - 9186743 9186839 3'utr CG8026 FlyBase G16145.1 AGTTGTTGCGAAGACTTATTTGGTCTTTTCGTAGTAAGTAAAGTGATTGTTGTTCCTAAGTGTGGATCAGAATGGATTTGTGATTGAATTCAGACGA 95 9186791 0.987564343 17 93 827 0.98630137 1.857332496 0.171232877 0.389473684 0.602739726 95 1 1 144 2R:9186743-9186839 7 58.5 1860 FBgn0033391 992.26 57.94 89.16 0.058956322 1.009665171 0.656123822 3 3 3 0.1 dme-miR-932-5p 7mer-A1 GAATTGA 2R 9187003 9187009 - 2R_9187003_9187009_- 0.728377895 0.728625057 0.728501476 0.000174797 CG8026 FBtr0088611 9186668 9188013 2R - 9186973 9187030 stop_codon CG8026 FlyBase G21293.1 TCCTGCTCGCCAGGCGGAAGCGAATTGAGACTAAAGAGGATGCGTCGGACGTGTGATT 48 9187005 0.838945445 4 41 158 0.962264151 1.40654018 0.283018868 0.083333333 0.169811321 48 1 1 51 2R:9186973-9187030 7 CG8026 FBtr0088611 9186668 9188013 GAATTGA 7mer-A1 dme-miR-932-5p 2R - 9186938 9187032 stop_codon CG8026 FlyBase G16146.1 TTTCCTGCTCGCCAGGCGGAAGCGAATTGAGACTAAAGAGGATGCGTCGGACGTGTGATTTTCCTTTGGTTGGATTCCTTTTAGGCTTCTAAGAT 41 9187005 0.823719942 7 39 200 0.929824561 1.72427587 0.280701754 0.317073171 0.50877193 41 4 0 53 2R:9186938-9187032 7 32.5 1861 FBgn0033391 992.26 57.94 89.16 0.032753512 0.560925095 0.364513235 -4 -4 -4 0.1 dme-miR-980-5p 7mer-m8 GAAAAAC 2R 9187612 9187618 - 2R_9187612_9187618_- 0.577372231 0.6201731 0.598772665 0.030264807 CG8026 FBtr0088611|FBtr0302511 9186668|9187361 9188013|9188013 2R - 9187540 9187645 3'utr CG8026 FlyBase G21296.1 AACGGCTTGGAATTGTGTAAGCACAAAGAAAAACCAGTTACTGTTTAGTTGATACAAAATTTCGTTTTGGCAAAAAGATTCTTCATAGTTTTTGAAAATGGTTTAT 13 9187601 0.9873859 11 12 103 0.9375 1.176091259 0 0.230769231 0.375 13 1 0 15 2R:9187540-9187645 7 CG8026 FBtr0302511|FBtr0088611 9187361|9186668 9188013|9188013 GAAAAAC 7mer-m8 dme-miR-980-5p 2R - 9187511 9187642 3'utr CG8026 FlyBase G16150.1 GGCTTGGAATTGTGTAAGCACAAAGAAAAACCAGTTACTGTTTAGTTGATACAAAATTTCGTTTTGGCAAAAAGATTCTTCATAGTTTTTGAAAATGGTTTATAATTTTAAGGATAAACCTTGACATTTATG 15 9187628 0.975508554 10 14 116 0.909090909 1.301029996 0.181818182 0.333333333 0.545454545 15 2 0 20 2R:9187511-9187642 7 5 1862 FBgn0033391 992.26 57.94 89.16 0.005039002 0.086296168 0.056078959 -17 10 -3.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2R 9187765 9187770 - 2R_9187765_9187770_- 0.730945175 0.730946772 0.730945973 1.13E-06 CG8026 FBtr0088611|FBtr0088611|FBtr0088611|FBtr0302511|FBtr0302511|FBtr0302511 9186668|9186668|9186668|9187361|9187361|9187361 9188013|9188013|9188013|9188013|9188013|9188013 2R - 9187750 9187807 3'utr CG8026 FlyBase G21297.1 TTGTACATCCTTCACTCCCAACTTCGAAAGTAACTGATGTGATCGGGGCGTCGTCAAA 306 9187773 0.790896844 9 289 1571 0.947674419 1.66811956 0.316860465 0.114379085 0.212209302 306 12 6 326 2R:9187750-9187807 6 CG8026 FBtr0302511|FBtr0302511|FBtr0302511|FBtr0088611|FBtr0088611|FBtr0088611 9187361|9187361|9187361|9186668|9186668|9186668 9188013|9188013|9188013|9188013|9188013|9188013 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 9187752 9187808 3'utr CG8026 FlyBase G16151.2 ATTGTACATCCTTCACTCCCAACTTCGAAAGTAACTGATGTGATCGGGGCGTCGTCA 213 9187773 0.771512385 11 196 1074 0.905198777 1.693140461 0.244648318 0.38028169 0.596330275 213 26 5 296 2R:9187752-9187808 6 252.5 1863 FBgn0033391 992.26 57.94 89.16 0.254469595 4.357956507 2.831987438 3 3 3 0.1 dme-miR-980-3p 7mer-A1 GCAGCTA 2R 9187911 9187917 - 2R_9187911_9187917_- 0.811386861 0.810398713 0.810892787 0.000698763 CG8026 FBtr0088611|FBtr0302511 9186668|9187361 9188013|9188013 2R - 9187817 9188049 stop_codon CG8026 FlyBase G21298.1 ATGGTCATGCTGATCTGGGAGAAGCTGACCAGCTAGATGGAGTATTAGTACTAGATCATCGAATCTGGAATCTGACAGAGAATTTAAGCTAAGCACCTAGAATACACGAATCTTTCTCGTTTCCTCCGATGTGCAGCTAACAGCAGAAAATGACAAACTTATTCTGTATTATTGTTGTAACTCGATTTCGGTTTAGCCCTAGCACCTTACTTTAGCCTTAAGTGTATTCCATA 545 9187920 0.977715505 36 530 3511 0.974151858 2.303196057 0.248788368 0.111926606 0.2180937 545 14 2 603 2R:9187817-9188049 7 CG8026 FBtr0302511|FBtr0088611 9187361|9186668 9188013|9188013 GCAGCTA 7mer-A1 dme-miR-980-3p 2R - 9187826 9188028 stop_codon CG8026 FlyBase G16152.1 AAGCTGACCAGCTAGATGGAGTATTAGTACTAGATCATCGAATCTGGAATCTGACAGAGAATTTAAGCTAAGCACCTAGAATACACGAATCTTTCTCGTTTCCTCCGATGTGCAGCTAACAGCAGAAAATGACAAACTTATTCTGTATTATTGTTGTAACTCGATTTCGGTTTAGCCCTAGCACCTTACTTTAGCCTTAAGTG 389 9187920 0.841531504 25 382 2529 0.98791019 2.280274774 0.27806563 0.375321337 0.580310881 389 5 2 572 2R:9187826-9188028 7 411.5 1864 FBgn0033391 992.26 57.94 89.16 0.414709854 7.102174663 4.61529834 3 3 3 0.1 dme-miR-317-3p 8mer-A1 TGTGTTCA 2R 9204658 9204665 - 2R_9204658_9204665_- 0.631136685 0.631136625 0.631136655 7.07E-08 CG8027 FBtr0088609 9204408 9204905 2R - 9204639 9204689 3'utr CG8027 FlyBase G21307.1 CCAGCTTTTGCAGTCGACCTGTTTTGTGTTCAGTTTCATAATATCTAAGTT 59 9204666 0.718233928 9 57 685 0.955223881 1.329058719 0.343283582 0.101694915 0.208955224 59 1 2 64 2R:9204639-9204689 8 CG8027 FBtr0088609 9204408 9204905 TGTGTTCA 8mer-A1 dme-miR-317-3p 2R - 9204640 9204685 3'utr CG8027 FlyBase G16159.1 CTTTTGCAGTCGACCTGTTTTGTGTTCAGTTTCATAATATCTAAGT 47 9204666 0.722405198 6 45 523 0.961538462 1.875061263 0.371794872 0.425531915 0.653846154 47 3 0 75 2R:9204640-9204685 8 52 1865 FBgn0033392 84.66666667 3.863333333 5.83 0.614173228 13.45987921 8.919382504 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 9204863 9204869 - 2R_9204863_9204869_- 0.783919537 0.785465597 0.784692567 0.001093258 CG8027 FBtr0088609|FBtr0088609|FBtr0088609 9204408|9204408|9204408 9204905|9204905|9204905 2R - 9204764 9204943 stop_codon CG8027 FlyBase G21308.1 AGGCGAAGCTGGTGAGGCGCTGTGTGCAGCGCTTGTAGGATCGATTTCGTGAAGTTCTCTCCCTTCTGCAATGTTGTGATATGTTGTGAACATTTATGTAAATTGGCCATTTCTGCAAGCGATCATAGTCAAATCTAGTTGTAGGCCATGTGTAAGGCTATTTTTCTAGTTCTTTAGGTG 57 9204871 0.841418001 22 54 535 0.945945946 1.367976785 0.135135135 0.228070175 0.405405405 57 2 2 70 2R:9204764-9204943 7 CG8027 FBtr0088609|FBtr0088609|FBtr0088609 9204408|9204408|9204408 9204905|9204905|9204905 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 9204850 9204895 3'utr CG8027 FlyBase G16162.1 GTGAAGTTCTCTCCCTTCTGCAATGTTGTGATATGTTGTGAACATT 26 9204871 0.724780626 9 25 265 0.971428571 1.531478917 0.314285714 0.269230769 0.457142857 26 1 0 34 2R:9204850-9204895 7 24 1866 FBgn0033392 84.66666667 3.863333333 5.83 0.283464567 6.212251941 4.116638079 2 2 2 0.1 dme-miR-33-5p 6mer3-8 CAATGC 2R 9209144 9209149 + 2R_9209144_9209149_+ 0.999999478 0.999999966 0.999999722 3.54E-07 VhaAC45 FBtr0088588|FBtr0088587 9209104|9209104 9209655|9209774 2R + 9209115 9209163 3'utr VhaAC45 FlyBase G14308.1 ATCATCGGTTCACACCTTATTTGATTGTTCAATGCGCACTCAATATTCA 21 9209135 0.733172323 6 20 189 0.958333333 1.06069784 0.125 0.142857143 0.25 21 0 1 23 2R:9209115-9209163 6 VhaAC45 FBtr0088587|FBtr0088588 9209104|9209104 9209774|9209655 CAATGC 6mer3-8 dme-miR-33-5p 2R + 9209117 9209166 3'utr VhaAC45 FlyBase G10888.1 CATCGGTTCACACCTTATTTGATTGTTCAATGCGCACTCAATATTCATTC 17 9209135 0.680947875 8 14 152 0.727272727 1.204119983 0 0.176470588 0.363636364 17 6 0 16 2R:9209117-9209166 6 16 1867 FBgn0262515 1434.51 91.37 139.18 0.011153634 0.175112181 0.114959046 9 9 9 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA 2R 9209596 9209601 + 2R_9209596_9209601_+ 1 0.999999984 0.999999992 0 VhaAC45 FBtr0088588|FBtr0088587 9209104|9209104 9209655|9209774 2R + 9209465 9209621 3'utr VhaAC45 FlyBase G14311.1 GAGCGCGCGCGTGTGTGTGTGTGCACATGGGCAGTAAATCTAATCCGAAGTATATCTAAGTGTTTTATAGTTTCTTGTTTGGCGCAAATATGCGAGACTAATTTATGCCTCTGTATGATAGTTTGTCATTTGTGCAACCCTCCTGTTGTTCGCAGGC 20 9209609 0.985963598 14 17 148 0.92 1.361727836 0.36 0.2 0.36 20 2 0 23 2R:9209465-9209621 6 VhaAC45 FBtr0088587|FBtr0088588 9209104|9209104 9209774|9209655 GTGCAA 6mer3-8 dme-miR-92b-3p 2R + 9209569 9209614 3'utr VhaAC45 FlyBase G10891.1 ATGCCTCTGTATGATAGTTTGTCATTTGTGCAACCCTCCTGTTGTT 7 9209609 0.966486979 4 6 59 0.875 0.84509804 0.125 0.142857143 0.25 7 1 0 7 2R:9209569-9209614 6 5.5 1868 FBgn0262515 1434.51 91.37 139.18 0.003834062 0.060194812 0.039517172 -13 -13 -13 0.1 dme-miR-33-5p 7mer-m8 CAATGCA 2R 9252851 9252857 - 2R_9252851_9252857_- 0.674515173 0.674515137 0.674515155 7.07E-08 Pkn FBtr0302604|FBtr0088603|FBtr0301511|FBtr0112897|FBtr0088604|FBtr0088605|FBtr0088601 9252308|9252308|9252308|9252308|9252308|9252308|9252308 9254063|9254063|9254063|9254063|9254063|9254063|9254063 2R - 9252786 9252890 3'utr Pkn FlyBase G21313.1 TGCACACCTCATGCGAATCGAAACGAGTATAAACAATGCAGATCTTCTATTGTCATTTTTATTATGATTATGCTCACAACTTGCGGCTATAATCATCGATTTAAT 21 9252844 0.927473004 10 18 153 0.92 1.06069784 0.28 0.19047619 0.32 21 1 1 23 2R:9252786-9252890 7 Pkn FBtr0112897|FBtr0301511|FBtr0088603|FBtr0302604|FBtr0088605|FBtr0088604|FBtr0088601 9252308|9252308|9252308|9252308|9252308|9252308|9252308 9254063|9254063|9254063|9254063|9254063|9254063|9254063 CAATGCA 7mer-m8 dme-miR-33-5p 2R - 9252830 9252901 3'utr Pkn FlyBase G16164.1 GATAACGATTTTGCACACCTCATGCGAATCGAAACGAGTATAAACAATGCAGATCTTCTATTGTCATTTTTA 21 9252846 0.910310884 7 19 145 0.933333333 1.146128036 0.233333333 0.333333333 0.533333333 21 1 1 28 2R:9252830-9252901 7 13 1869 FBgn0020621 844.8 19.37333333 29.6 0.015388258 0.671025465 0.439189189 -13 -11 -12 0.1 dme-miR-2b-2-5p 6mer2-7 TGAAGA 2R 9288665 9288670 + 2R_9288665_9288670_+ 0.999999994 0.999996916 0.999998455 2.19E-06 CG1968 FBtr0088596 9287961 9289026 2R + 9288631 9288692 3'utr CG1968 FlyBase G14320.1 CAGAGCAATCAATCTAAAATAGAAACAAACCTGCTGAAGATCTTCATGTCCAAGATGGACGC 16 9288677 0.975950883 6 13 82 0.909090909 1.301029996 0.272727273 0.25 0.454545455 16 2 0 20 2R:9288631-9288692 6 CG1968 FBtr0088596 9287961 9289026 TGAAGA 6mer2-7 dme-miR-2b-2-5p 2R + 9288657 9288712 3'utr CG1968 FlyBase G10898.1 AAACCTGCTGAAGATCTTCATGTCCAAGATGGACGCCTTTCTGGAACTACCCGATG 12 9288676 0.976448332 6 11 73 1 1.204119983 0.4375 0.333333333 0.5 12 0 0 16 2R:9288657-9288712 6 11.5 1870 FBgn0033401 141.2733333 8.553333333 13.19 0.081402482 1.344505066 0.871872631 -12 -11 -11.5 0.1 dme-miR-8-3p 7mer-A1 AGTATTA 2R 9303113 9303119 - 2R_9303113_9303119_- 0.756510718 0.823349562 0.78993014 0.047262239 Myd88 FBtr0333000 9302821 9303893 2R - 9303117 9303160 3'utr Myd88 FlyBase G21340.1 CATCATCACATCGTCTCTTTCAATGTATCTAGAGTCTATATAGT 9 9303138 0.913632128 4 8 74 0.888888889 0.602059991 0 0 0 9 0 1 8 2R:9303117-9303160 2 Myd88 FBtr0333000 9302821 9303893 AGTATTA 7mer-A1 dme-miR-8-3p 2R - 9303112 9303148 3'utr Myd88 FlyBase G16182.1 GTCTCTTTCAATGTATCTAGAGTCTATATAGTATTAT 5 9303127 0.695731322 3 5 53 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 2R:9303112-9303148 7 1.5 1871 FBgn0033402 1078.95 50.21333333 77.45 0.001390241 0.029872544 0.019367334 19 8 13.5 0.1 dme-miR-317-5p 6mer2-7 TATCCC 2R 9396395 9396400 - 2R_9396395_9396400_- 0.999517482 0.99953766 0.999527571 1.43E-05 Non1 FBtr0300649|FBtr0088554 9396263|9396358 9396478|9396478 2R - 9396386 9396421 3'utr Non1 FlyBase G21351.1 TATAAACTAAGCGTCTATCTTTATCCCTGAAAAACA 22 9396401 0.948088057 6 21 158 0.958333333 1.361727836 0.041666667 0.090909091 0.166666667 22 1 0 23 2R:9396386-9396421 6 Non1 FBtr0300649|FBtr0088554 9396263|9396358 9396478|9396478 TATCCC 6mer2-7 dme-miR-317-5p 2R - 9396384 9396413 3'utr Non1 FlyBase G16192.1 AAGCGTCTATCTTTATCCCTGAAAAACATT 25 9396401 0.623016815 5 24 175 1 1.612783857 0.170731707 0.4 0.634146341 25 0 0 41 2R:9396384-9396413 6 23 1872 FBgn0028473 3601.33 199.31 303.37 0.006386529 0.115398124 0.075815011 1 1 1 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2R 9396443 9396448 - 2R_9396443_9396448_- 0.999999997 1 0.999999998 0 Non1 FBtr0300649|FBtr0088554 9396263|9396358 9396478|9396478 2R - 9396446 9396537 stop_codon Non1 FlyBase G21352.1 AGATGCCGAAGCATTTGTTCTCCGGCAAGCGTGGAAATGGCAAGACGGATCGCCGTTAAGCGCCGCAGCCTTGGCTGGTTAAGTGATTCTAC 31 9396459 0.855264097 10 30 193 0.970588235 1.217483944 0.117647059 0.096774194 0.176470588 31 0 1 33 2R:9396446-9396537 2 Non1 FBtr0300649|FBtr0088554 9396263|9396358 9396478|9396478 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2R - 9396446 9396479 stop_codon Non1 FlyBase G16193.1 AGCGCCGCAGCCTTGGCTGGTTAAGTGATTCTAC 19 9396459 0.939739857 4 15 127 0.826086957 0.67669361 0.173913043 0.157894737 0.304347826 19 1 3 19 2R:9396446-9396479 2 16 1873 FBgn0028473 3601.33 199.31 303.37 0.004442803 0.080276955 0.052740877 11 11 11 0.1 dme-miR-184-5p 6mer3-8 TGATAA 2R 9399795 9399800 - 2R_9399795_9399800_- 0.999828718 0.892498951 0.946163834 0.075893559 CG33774 FBtr0091775 9399751 9399846 2R - 9399752 9399807 3'utr CG33774 FlyBase G21365.1 AGGATAATGATAATGCTGCTTCATTCGCAAAATAAATATGTAGTTGTACAAATCTA 11 9399786 0.947342514 8 10 81 0.933333333 1.146128036 0.066666667 0.181818182 0.4 11 1 0 14 2R:9399752-9399807 6 CG33774 FBtr0091775 9399751 9399846 TGATAA 6mer3-8 dme-miR-184-5p 2R - 9399754 9399807 3'utr CG33774 FlyBase G16207.1 AGGATAATGATAATGCTGCTTCATTCGCAAAATAAATATGTAGTTGTACAAATC 8 9399784 0.982300487 5 8 62 1 1.041392685 0 0.25 0.454545455 8 0 0 11 2R:9399754-9399807 6 8 1874 FBgn0053774 45.25333333 22.76333333 34.59666667 0.176782557 0.351442378 0.23123615 -14 -16 -15 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 9425649 9425655 + 2R_9425649_9425655_+ 0.661590306 0.661605832 0.661598069 1.10E-05 prel FBtr0300293|FBtr0333003 9425641|9425641 9426107|9426107 2R + 9425603 9425689 stop_codon prel FlyBase G14324.1 TGCCTCCAAGATTGCGCAACTGTTTTCTGTCAAGAACTGAGGAACTTCTAGTCTGTACTTTTTGGAATAGATGTCGAATGGGACCGA 33 9425648 0.978537448 9 33 227 1 1.579783597 0 0.121212121 0.236842105 33 0 0 38 2R:9425603-9425689 7 prel FBtr0300293|FBtr0333003 9425641|9425641 9426107|9426107 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 9425596 9425675 stop_codon prel FlyBase G10903.1 AGAGTCATGCCTCCAAGATTGCGCAACTGTTTTCTGTCAAGAACTGAGGAACTTCTAGTCTGTACTTTTTGGAATAGATG 21 9425648 0.982486341 10 20 145 0.96969697 1.505149978 0.363636364 0.428571429 0.636363636 21 1 0 32 2R:9425596-9425675 7 22.5 1875 FBgn0033413 247.3533333 19.64666667 30.09333333 0.090962995 1.14523244 0.747673903 1 1 1 0.1 dme-bantam-3p 6mer3-8 TGATCT 2R 9425864 9425869 + 2R_9425864_9425869_+ 0.999990204 0.999973058 0.999981631 1.21E-05 prel FBtr0300293|FBtr0333003 9425641|9425641 9426107|9426107 2R + 9425790 9425962 3'utr prel FlyBase G14326.1 AAACATTTATTCCAAAGCAAATCCAACTACATACTTTGCTGCATTTCATTCCGTGTGTGCGCGAATCAAACGGCTGATCTGAACGGAGACACAATTTGCTGAACACATTTCCTGCATGCTACCAAATTCTATTATTTATCGTTACTTATTTGCACTACATTATTATGTATCAT 76 9425864 0.975451329 23 74 466 0.978723404 1.662757832 0.127659574 0.210526316 0.361702128 76 1 1 92 2R:9425790-9425962 6 prel FBtr0300293|FBtr0333003 9425641|9425641 9426107|9426107 TGATCT 6mer3-8 dme-bantam-3p 2R + 9425822 9425961 3'utr prel FlyBase G10904.1 ACTTTGCTGCATTTCATTCCGTGTGTGCGCGAATCAAACGGCTGATCTGAACGGAGACACAATTTGCTGAACACATTTCCTGCATGCTACCAAATTCTATTATTTATCGTTACTTATTTGCACTACATTATTATGTATCA 62 9425865 0.972013872 14 58 341 0.928571429 1.193124598 0.238095238 0.306451613 0.488095238 62 2 4 78 2R:9425822-9425961 6 37 1876 FBgn0033413 247.3533333 19.64666667 30.09333333 0.149583592 1.883271123 1.229508197 0 -1 -0.5 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 9433367 9433372 + 2R_9433367_9433372_+ 0.999920803 0.999885713 0.999903258 2.48E-05 Pdk FBtr0306807 9433272 9433952 2R + 9433315 9433415 3'utr Pdk FlyBase G14338.1 AAATAAAAAAGAAATGAGATGTGATGAGTTGAGAAATGAAGCGAACCGCCTGGCTGTGTAAAGAGTTTGCGCCACCCTGCACCAATTGAATTCAATCCAAT 829 9433365 0.961121787 16 803 3218 0.970408163 2.376120526 0.343877551 0.145958987 0.27755102 829 26 3 951 2R:9433315-9433415 6 Pdk FBtr0306807 9433272 9433952 GCTGTG 6mer2-7 dme-miR-1008-3p 2R + 9433315 9433395 3'utr Pdk FlyBase G10915.1 AAATAAAAAAGAAATGAGATGTGATGAGTTGAGAAATGAAGCGAACCGCCTGGCTGTGTAAAGAGTTTGCGCCACCCTGCA 563 9433365 0.964039765 14 545 1977 0.973193473 2.62065648 0.384615385 0.362344583 0.581585082 563 22 1 835 2R:9433315-9433395 6 669.5 1877 FBgn0017558 322.33 15.26666667 23.27333333 2.077063879 43.85371179 28.76682899 2 2 2 0.1 dme-miR-12-5p 6mer2-7 ATACTC 2R 9433770 9433775 + 2R_9433770_9433775_+ 1 0.999999768 0.999999884 1.41E-07 Pdk FBtr0306807 9433272 9433952 2R + 9433750 9433863 3'utr Pdk FlyBase G14340.1 TATATACACGACAAACATTTATACTCTGAAGTAAACTGATGTTTTGAAACATTTACGAAATTAGCTTTAATTTGTGGATTTTAATTAGGCTAAAGCCCGAACTGCATGCAATGT 27 9433769 0.972947757 13 27 167 1 1.531478917 0.235294118 0.259259259 0.411764706 27 0 0 34 2R:9433750-9433863 6 Pdk FBtr0306807 9433272 9433952 ATACTC 6mer2-7 dme-miR-12-5p 2R + 9433746 9433782 3'utr Pdk FlyBase G10917.1 AACCTATATACACGACAAACATTTATACTCTGAAGTA 5 9433769 0.963316101 4 4 22 1 0.77815125 0.666666667 0.2 0.333333333 5 0 0 6 2R:9433746-9433782 6 7 1878 FBgn0017558 322.33 15.26666667 23.27333333 0.021716874 0.458515284 0.300773417 1 1 1 0.1 dme-miR-92b-3p 6mer2-7 TGCAAT 2R 9433856 9433861 + 2R_9433856_9433861_+ 0.999919621 0.99935491 0.999637266 0.000399303 Pdk FBtr0306807 9433272 9433952 2R + 9433750 9433863 3'utr Pdk FlyBase G14340.1 TATATACACGACAAACATTTATACTCTGAAGTAAACTGATGTTTTGAAACATTTACGAAATTAGCTTTAATTTGTGGATTTTAATTAGGCTAAAGCCCGAACTGCATGCAATGT 27 9433834 0.972947757 13 27 167 1 1.531478917 0.235294118 0.259259259 0.411764706 27 0 0 34 2R:9433750-9433863 6 Pdk FBtr0306807 9433272 9433952 TGCAAT 6mer2-7 dme-miR-92b-3p 2R + 9433796 9433862 3'utr Pdk FlyBase G10918.1 AAACATTTACGAAATTAGCTTTAATTTGTGGATTTTAATTAGGCTAAAGCCCGAACTGCATGCAATG 13 9433856 0.850894784 5 12 85 0.947368421 1.255272505 0.368421053 0.384615385 0.578947368 13 1 0 18 2R:9433796-9433862 6 6.5 1879 FBgn0017558 322.33 15.26666667 23.27333333 0.020165669 0.425764192 0.279289602 22 0 11 0.1 dme-miR-1003-3p 8mer-A1 ATGTGAGA 2R 9434853 9434860 - 2R_9434853_9434860_- 0.643202491 0.642541208 0.642871849 0.00046761 ced-6 FBtr0306808|FBtr0088549|FBtr0088548|FBtr0088550|FBtr0339384 9434667|9434667|9434667|9434667|9434667 9435274|9435274|9435274|9435274|9435274 2R - 9434684 9434998 3'utr ced-6 FlyBase G21372.1 AGAAACAACCGCAATGCACCTTGTTTAAACGTATCAATTTGTTGCTGTAGTTGAATAGATTAATTGATGGTCGAGTAAAGCGAATGAAAAAATGTTAACAAGTGATAAATGTGAAAATTGCTAAACAATGCTAACTGAATGTGAGAATTTTGTATAAAATAATTATAAAGACATAACCAGAAGCAAATGAATCGATTACTGTATAGAGCCGAAATACGAGGAGAATTAAAGCAAAATGAACAATATTTAATGTTATTGATGCAATATAGAGAAATATTATTATTACTATTATTATTGTGTACGTAAAGAATAAAA 201 9434864 0.976622056 49 190 1321 0.948207171 2.376576957 0.151394422 0.208955224 0.366533865 201 13 0 238 2R:9434684-9434998 8 ced-6 FBtr0339384|FBtr0088550|FBtr0088548|FBtr0088549|FBtr0306808 9434667|9434667|9434667|9434667|9434667 9435274|9435274|9435274|9435274|9435274 ATGTGAGA 8mer-A1 dme-miR-1003-3p 2R - 9434718 9435033 3'utr ced-6 FlyBase G16210.1 TGATAATAATCTGAGGTCAAGATCAAAAGAACACAAGAAACAACCGCAATGCACCTTGTTTAAACGTATCAATTTGTTGCTGTAGTTGAATAGATTAATTGATGGTCGAGTAAAGCGAATGAAAAAATGTTAACAAGTGATAAATGTGAAAATTGCTAAACAATGCTAACTGAATGTGAGAATTTTGTATAAAATAATTATAAAGACATAACCAGAAGCAAATGAATCGATTACTGTATAGAGCCGAAATACGAGGAGAATTAAAGCAAAATGAACAATATTTAATGTTATTGATGCAATATAGAGAAATATTATT 155 9434869 0.977406578 47 140 923 0.916317992 1.86332286 0.209205021 0.393548387 0.606694561 155 18 2 219 2R:9434718-9435033 8 67.5 1880 FBgn0029092 3414.266667 169.59 258.2733333 0.019769985 0.398018751 0.261351023 4 9 6.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 9478158 9478164 + 2R_9478158_9478164_+ 0.661612439 0.661596789 0.661604614 1.10E-05 Camta FBtr0339381 9477617 9480076 2R + 9478117 9478210 3'utr Camta FlyBase G14347.1 ATAGTTACATTTGTATATAGATATTGCCTAACTAACTAAATTCTAGTCTATTTTAACGTACTACCAAGCTCTGCGATGCGACTAAGCTTGTCTC 52 9478157 0.986191193 11 51 435 0.984848485 1.812913357 0.03030303 0.211538462 0.378787879 52 1 0 65 2R:9478117-9478210 7 Camta FBtr0339381 9477617 9480076 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 9478144 9478199 3'utr Camta FlyBase G10923.1 CTAACTAACTAAATTCTAGTCTATTTTAACGTACTACCAAGCTCTGCGATGCGACT 35 9478157 0.877909453 4 35 240 1 1.707570176 0.019607843 0.314285714 0.529411765 35 0 0 51 2R:9478144-9478199 7 31 1881 FBgn0259234 576.11 9.96 15.38666667 0.053809168 3.112449799 2.014731369 1 1 1 0.1 dme-miR-184-3p 8mer-A1 TCCGTCCA 2R 9478755 9478762 + 2R_9478755_9478762_+ 0.631136146 0.631136384 0.631136265 2.12E-07 Camta FBtr0339381 9477617 9480076 2R + 9478746 9478789 3'utr Camta FlyBase G14349.1 TTATTTTTGTCCGTCCACATTGTTAGCTTTCATAACATACCAAC 6 9478751 0.990542169 4 4 50 0.875 0.84509804 0.25 0.166666667 0.375 6 1 0 7 2R:9478746-9478789 8 Camta FBtr0339381 9477617 9480076 TCCGTCCA 8mer-A1 dme-miR-184-3p 2R + 9478743 9478780 3'utr Camta FlyBase G10924.1 AAATTATTTTTGTCCGTCCACATTGTTAGCTTTCATAA 6 9478751 0.670195448 4 5 63 1 1 0.2 0.5 0.7 6 0 0 10 2R:9478743-9478780 8 5 1882 FBgn0259234 576.11 9.96 15.38666667 0.008678898 0.502008032 0.324956672 4 4 4 0.1 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2R 9566488 9566493 - 2R_9566488_9566493_- 0.671397995 0.684623311 0.678010653 0.009351699 Not1 FBtr0304957 9566144 9567977 2R - 9566272 9566682 3'utr Not1 FlyBase G21396.2 TCGAATCTAAATTCATTATCCTACGTTAGGCAATTTGCGAGTTATGTATGTACATGTACGTGTTATTCAGTCCCTCATTCACTCGACACTCAGCAGCCTGCAGCAAAGCAACTCTATTAGTTTTTAGTCTACCGCAAATGAACATTCATTGTATTTACGCAAGTCAAATCTATTTTGAATTAAACTGAATTGAAGCCTGAAGCCGAGCAAAGTGCACATGTAGAAAGCGAGAGAGAGGAGAGTAGAGAGTAGATGATGGAAGAAGGGCTAGCTTTTTAGCCAAAGGCCCAACTCATTTATAGACTAATTCCGTTTGCAATGGCTAAGAAGTATGTATATGATGGATGTACAGACATTCGTTCACCGATCGACCGACACATTCATAAACGAAAGCTGCGACACAAGAAACCA 316 9566493 0.958071144 54 295 1586 0.931232092 2.034762106 0.140401146 0.091772152 0.17765043 316 22 2 325 2R:9566272-9566682 6 Not1 FBtr0304957 9566144 9567977 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2R - 9566410 9566513 3'utr Not1 FlyBase G16233.1 CTATTTTGAATTAAACTGAATTGAAGCCTGAAGCCGAGCAAAGTGCACATGTAGAAAGCGAGAGAGAGGAGAGTAGAGAGTAGATGATGGAAGAAGGGCTAGCT 110 9566493 0.742294772 10 104 419 0.961538462 1.698970004 0.205128205 0.336363636 0.532051282 110 4 2 150 2R:9566410-9566513 6 116.5 1883 FBgn0085436 10306.14667 124.2833333 191.6566667 0.011303934 0.937374279 0.607857801 0 0 0 0.1 dme-bantam-3p 6mer3-8 TGATCT 2R 9567052 9567057 - 2R_9567052_9567057_- 0.995256173 0.998118736 0.996687454 0.002024093 Not1 FBtr0304957 9566144 9567977 2R - 9566889 9567095 3'utr Not1 FlyBase G21398.1 AGCAGCCACTGCAACATTAACCAGAACCAACCAATGTTTGATCTTCTTATACGCAATATAAGCGATACGTTTTGTTTTAACCTACATTATTTTATGAACTGATTATTAACTGAAATGGAAATACATTGAACACATCTAGCTTGTTAAACGTATAATCGATCCTCCATGTAAAGATAAACGCTGTTAGAATCAGATAGATGAGTGAAT 152 9567049 0.875676875 42 137 1205 0.90052356 1.457377197 0.120418848 0.230263158 0.387434555 152 14 5 172 2R:9566889-9567095 6 Not1 FBtr0304957 9566144 9567977 TGATCT 6mer3-8 dme-bantam-3p 2R - 9567018 9567092 3'utr Not1 FlyBase G16239.1 AGCCACTGCAACATTAACCAGAACCAACCAATGTTTGATCTTCTTATACGCAATATAAGCGATACGTTTTGTTTT 56 9567058 0.934499158 12 54 454 0.9625 1.886490725 0.0625 0.267857143 0.4875 56 3 0 77 2R:9567018-9567092 6 54 1884 FBgn0085436 10306.14667 124.2833333 191.6566667 0.005239592 0.434491082 0.281753831 -8 1 -3.5 0.1 dme-miR-2a-2-5p 7mer-m1 GATGAGG 2R 9567289 9567295 - 2R_9567289_9567295_- 0.825539216 0.825582373 0.825560795 3.05E-05 Not1 FBtr0304957 9566144 9567977 2R - 9567239 9567348 3'utr Not1 FlyBase G21400.1 CAAACCTACTCTCAACGCCGCTGAGAGCGATATTTATAGACGGTGAGCATGAGGATGAGGAGAGGAGGAGAAGGAGAAGCCGAGCAGAATGTTGAAAAGATCCTCAAGTC 18 9567313 0.934861369 11 18 65 1 1.278753601 0.473684211 0.055555556 0.105263158 18 0 0 19 2R:9567239-9567348 7 Not1 FBtr0304957 9566144 9567977 GATGAGG 7mer-m1 dme-miR-2a-2-5p 2R - 9567275 9567313 3'utr Not1 FlyBase G16240.1 ATAGACGGTGAGCATGAGGATGAGGAGAGGAGGAGAAGG 5 9567299 0.868858911 3 4 11 0.7 0.84509804 0 0.6 0.8 5 3 0 7 2R:9567275-9567313 7 6 1885 FBgn0085436 10306.14667 124.2833333 191.6566667 0.000582177 0.048276787 0.031305981 18 4 11 0.1 dme-miR-980-3p 6mer3-8 GGCAGC 2R 9567902 9567907 - 2R_9567902_9567907_- 0.999999426 0.999999302 0.999999364 7.07E-08 Not1 FBtr0339394|FBtr0112672|FBtr0112673|FBtr0112674|FBtr0304957 9567512|9567512|9567512|9567512|9566144 9567977|9567977|9567977|9567977|9567977 2R - 9567892 9567930 3'utr Not1 FlyBase G21404.1 CAGACGCAGGCAGTAGCTGCCTGGGCAGCACACCACCAC 11 9567912 0.799303279 3 11 22 1 1.079181246 0.416666667 0.090909091 0.166666667 11 0 0 12 2R:9567892-9567930 6 Not1 FBtr0112672|FBtr0112673|FBtr0112674|FBtr0304957|FBtr0339394 9567512|9567512|9567512|9566144|9567512 9567977|9567977|9567977|9567977|9567977 GGCAGC 6mer3-8 dme-miR-980-3p 2R - 9567901 9567931 3'utr Not1 FlyBase G16244.1 CCAGACGCAGGCAGTAGCTGCCTGGGCAGCA 6 9567910 0.7967343 2 6 12 1 0.954242509 0.111111111 0.333333333 0.555555556 6 0 0 9 2R:9567901-9567931 6 8.5 1886 FBgn0085436 10306.14667 124.2833333 191.6566667 0.000824751 0.068392115 0.04435014 5 3 4 0.1 dme-miR-12-5p 6mer2-7 ATACTC 2R 9592424 9592429 + 2R_9592424_9592429_+ 0.999999984 0.99999999 0.999999987 0 Map60 FBtr0088530 9592414 9592744 2R + 9592373 9592472 stop_codon Map60 FlyBase G14377.1 GCGCGCCATCCTCGATGTGCAGAGCGACGAACTGGAGCAGTAGACCGACTGATACTCGCAATTTAAATGATTACTCAGCTTACTTATTAGACAAACTAAA 199 9592440 0.729808618 12 188 1148 0.946280992 1.757775491 0.02892562 0.201005025 0.342975207 199 10 3 229 2R:9592373-9592472 6 Map60 FBtr0088530 9592414 9592744 ATACTC 6mer2-7 dme-miR-12-5p 2R + 9592358 9592470 stop_codon Map60 FlyBase G10943.1 GGAGCTGTCCATCTTGCGCGCCATCCTCGATGTGCAGAGCGACGAACTGGAGCAGTAGACCGACTGATACTCGCAATTTAAATGATTACTCAGCTTACTTATTAGACAAACTA 124 9592423 0.970740122 15 117 674 0.956043956 1.763427994 0.098901099 0.338709677 0.549450549 124 6 2 174 2R:9592358-9592470 6 107.5 1887 FBgn0010342 1158.76 77.84 119.11 0.092771583 1.381038027 0.902527076 -16 1 -7.5 0.1 dme-miR-305-3p 7mer-m1 TGTGCCG 2R 9592554 9592560 + 2R_9592554_9592560_+ 0.82558229 0.825582372 0.825582331 7.07E-08 Map60 FBtr0088530 9592414 9592744 2R + 9592516 9592575 3'utr Map60 FlyBase G14378.1 TATCGTATTATTTTTTCCGTGTTCAAACGTCTGCGTTCTGTGCCGCCCACTTGTAAAATG 59 9592556 0.982674582 8 55 412 0.924242424 1.183269844 0.333333333 0.084745763 0.181818182 59 2 3 61 2R:9592516-9592575 7 Map60 FBtr0088530 9592414 9592744 TGTGCCG 7mer-m1 dme-miR-305-3p 2R + 9592528 9592579 3'utr Map60 FlyBase G10944.1 TTTTCCGTGTTCAAACGTCTGCGTTCTGTGCCGCCCACTTGTAAAATGTATT 56 9592555 0.783456265 9 50 383 0.840909091 1.392110465 0.238636364 0.392857143 0.613636364 56 12 2 74 2R:9592528-9592579 7 55 1888 FBgn0010342 1158.76 77.84 119.11 0.047464531 0.706577595 0.461758039 -2 -1 -1.5 0.1 dme-miR-317-3p 7mer-A1 GTGTTCA 2R 9592600 9592606 + 2R_9592600_9592606_+ 0.82334883 0.823349319 0.823349075 3.54E-07 Map60 FBtr0088530 9592414 9592744 2R + 9592586 9592621 3'utr Map60 FlyBase G14379.1 CAGTTCTGGTATGAGTGTTCATAGCATTTACGCATG 12 9592597 0.805680015 3 12 103 1 1.113943352 0.307692308 0.083333333 0.153846154 12 0 0 13 2R:9592586-9592621 7 Map60 FBtr0088530 9592414 9592744 GTGTTCA 7mer-A1 dme-miR-317-3p 2R + 9592585 9592619 3'utr Map60 FlyBase G10945.1 ACAGTTCTGGTATGAGTGTTCATAGCATTTACGCA 6 9592596 0.714644962 3 4 42 0.6 0.954242509 0.133333333 1 1 6 6 0 9 2R:9592585-9592619 7 8.5 1889 FBgn0010342 1158.76 77.84 119.11 0.007335428 0.109198356 0.071362606 3 4 3.5 0.1 dme-miR-1002-5p 6mer3-8 CTACTT 2R 9592697 9592702 + 2R_9592697_9592702_+ 0.865522547 0.923443318 0.894482932 0.04095619 Map60 FBtr0088530 9592414 9592744 2R + 9592642 9592709 3'utr Map60 FlyBase G14380.1 AATGTATTTCTAATATTTGAGATTTCGAATTTGTCCCTATTTAAGGTTGAATATGCTACTTGATTTTA 13 9592694 0.989261666 7 12 127 0.941176471 1.204119983 0.058823529 0.230769231 0.411764706 13 1 0 16 2R:9592642-9592709 6 Map60 FBtr0088530 9592414 9592744 CTACTT 6mer3-8 dme-miR-1002-5p 2R + 9592643 9592713 3'utr Map60 FlyBase G10945.2 ATGTATTTCTAATATTTGAGATTTCGAATTTGTCCCTATTTAAGGTTGAATATGCTACTTGATTTTAAAAT 11 9592693 0.989272958 10 10 91 0.882352941 1.176091259 0 0.363636364 0.588235294 11 2 0 15 2R:9592643-9592713 6 6 1890 FBgn0010342 1158.76 77.84 119.11 0.005177949 0.077081192 0.050373604 3 4 3.5 0.1 dme-miR-33-5p 6mer2-7 AATGCA 2R 9605311 9605316 + 2R_9605311_9605316_+ 0.74765654 0.76762183 0.757639185 0.014117599 CG1902 FBtr0088531|FBtr0088532 9604941|9604941 9605624|9605624 2R + 9605263 9605331 3'utr CG1902 FlyBase G14388.2 TACACATTCTAACGTCCGGTCGAACGATTCATTCTACCATGATCCCATAATGCATTTTCATGATGAAAT 16 9605310 0.848544397 7 14 91 0.882352941 1.176091259 0.235294118 0.0625 0.117647059 16 2 0 15 2R:9605263-9605331 6 CG1902 FBtr0088531|FBtr0088532 9604941|9604941 9605624|9605624 AATGCA 6mer2-7 dme-miR-33-5p 2R + 9605288 9605314 3'utr CG1902 FlyBase G10949.1 GATTCATTCTACCATGATCCCATAATG 7 9605310 0.695002709 2 5 40 0.888888889 0.903089987 0.333333333 0.285714286 0.444444444 7 1 0 8 2R:9605288-9605314 4 8 1891 FBgn0033434 795.9833333 54.22333333 82.71333333 0.010050462 0.14753796 0.096719594 1 1 1 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 2R 9688649 9688655 - 2R_9688649_9688655_- 0.620202503 0.601875906 0.611039204 0.012958863 Uba1 FBtr0339517|FBtr0088499 9688287|9688287 9688767|9688767 2R - 9688527 9688676 3'utr Uba1 FlyBase G21476.2 AGGAGTTACTGTCTAGCTGTTTGCATTTTAATTTTCACAACACCATTACGAGAGCAGCCCAGATCTAGAAATTATATAAAATGTGTGTGAATCCTCTAAGGAATGGCAAAATAATACGCATCATACGAAATACAAAGACTCGACTAAAAG 33 9688656 0.978934507 14 30 218 0.923076923 1.079181246 0.153846154 0.181818182 0.307692308 33 1 2 36 2R:9688527-9688676 7 Uba1 FBtr0339517|FBtr0088499 9688287|9688287 9688767|9688767 TGCATTT 7mer-m8 dme-miR-277-3p 2R - 9688569 9688727 3'utr Uba1 FlyBase G16298.1 GATCCCGTTTTGTTGTCGGCGACGCGTTTTGGAATCGCGCAGCTCCAACGAAGGAGTTACTGTCTAGCTGTTTGCATTTTAATTTTCACAACACCATTACGAGAGCAGCCCAGATCTAGAAATTATATAAAATGTGTGTGAATCCTCTAAGGAATGGCA 27 9688655 0.984298163 15 24 194 0.909090909 1.602059991 0.25 0.481481481 0.681818182 27 4 0 40 2R:9688569-9688727 7 9.5 1892 FBgn0023143 3506.563333 97.42 149.3233333 0.002709205 0.09751591 0.063620332 1 0 0.5 0.1 dme-miR-8-3p 6mer2-7 AGTATT 2R 9715158 9715163 + 2R_9715158_9715163_+ 0.99926148 0.994240061 0.99675077 0.003550666 dap FBtr0088469 9715082 9716256 2R + 9715072 9715164 stop_codon dap FlyBase G14408.1 CGCCACAACTAATGCTCCAGATTCGCTGGCCAACCCACCGAATTGCAATTTGTAATTTTATTTTTTACAAGCCACTGCGATTGTGTAGTATTT 29 9715153 0.777688983 9 27 179 0.942857143 1.217483944 0.2 0.172413793 0.314285714 29 1 1 33 2R:9715072-9715164 6 dap FBtr0088469 9715082 9716256 AGTATT 6mer2-7 dme-miR-8-3p 2R + 9715134 9715164 3'utr dap FlyBase G10959.1 TTTTACAAGCCACTGCGATTGTGTAGTATTT 18 9715153 0.717407267 3 16 119 0.9 1.130333768 0.133333333 0.555555556 0.733333333 18 2 1 27 2R:9715134-9715164 6 11.5 1893 FBgn0010316 804.5033333 38.63 59.20333333 0.014294534 0.297696091 0.194245819 5 5 5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2R 9715307 9715312 + 2R_9715307_9715312_+ 0.999986126 0.992801974 0.99639405 0.005079926 dap FBtr0088469 9715082 9716256 2R + 9715249 9715409 3'utr dap FlyBase G14410.1 CAGTAATTAGTTGTAAGTCAACCAGTAAGCTCGAGCTAAATGAAACTTTTTAGATTTCTCTAGTGAGAAATGCCATAAACTAAGTGATTAGTTCTTAACAACAAACAACTATTGAACAAGAAGAGAGAGACCGCAAGCTAAATGGAATTAGTCTTAACTAT 58 9715304 0.970822335 21 44 346 0.757142857 1.72427587 0.171428571 0.189655172 0.328571429 58 17 0 53 2R:9715249-9715409 6 dap FBtr0088469 9715082 9716256 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 9715184 9715417 3'utr dap FlyBase G10960.1 CCTTTTTATGCAGTGCAAGGGCGACAGTTGCGAATATTAATCGTTAGTCTTCAACTACTCGTAACCAGTAATTAGTTGTAAGTCAACCAGTAAGCTCGAGCTAAATGAAACTTTTTAGATTTCTCTAGTGAGAAATGCCATAAACTAAGTGATTAGTTCTTAACAACAAACAACTATTGAACAAGAAGAGAGAGACCGCAAGCTAAATGGAATTAGTCTTAACTATCTTGAAGC 58 9715297 0.980317788 26 51 362 0.886075949 1.84509804 0.075949367 0.344827586 0.518987342 58 9 0 70 2R:9715184-9715417 6 14.5 1894 FBgn0010316 804.5033333 38.63 59.20333333 0.018023542 0.375355941 0.244918642 3 10 6.5 0.1 dme-bantam-3p 7mer-m8 TGATCTC 2R 9715858 9715864 + 2R_9715858_9715864_+ 0.661615243 0.661615243 0.661615243 0 dap FBtr0088469 9715082 9716256 2R + 9715780 9715955 3'utr dap FlyBase G14412.1 TGAATGCCGCCGAATGGACACAAATTGTCGCGCTCTCATTTCTTAACCAGTGCTAAAAATGTCTTTTATGATTTGCTATGATCTCTGGGCAAATTATGAAAACAATTTTGCCTGAAACTATCATGTACAAAAACTAGATTATTATACATACTATACACATAGGCAGAGCCTATTCT 1243 9715858 0.984773314 31 1202 9666 0.966003849 1.922552467 0.050032072 0.201930813 0.363694676 1243 36 17 1506 2R:9715780-9715955 7 dap FBtr0088469 9715082 9716256 TGATCTC 7mer-m8 dme-bantam-3p 2R + 9715780 9715926 3'utr dap FlyBase G10962.1 TGAATGCCGCCGAATGGACACAAATTGTCGCGCTCTCATTTCTTAACCAGTGCTAAAAATGTCTTTTATGATTTGCTATGATCTCTGGGCAAATTATGAAAACAATTTTGCCTGAAACTATCATGTACAAAAACTAGATTATTATAC 818 9715858 0.941397623 28 782 6291 0.955028618 2.026050158 0.061324612 0.376528117 0.582992641 818 45 10 1168 2R:9715780-9715926 7 930 1895 FBgn0010316 804.5033333 38.63 59.20333333 1.155992724 24.07455346 15.70857497 0 0 0 0.1 dme-miR-8-3p 6mer2-7 AGTATT 2R 9716011 9716016 + 2R_9716011_9716016_+ 0.955226665 0.950805628 0.953016146 0.00312619 dap FBtr0088469 9715082 9716256 2R + 9715986 9716053 3'utr dap FlyBase G14413.1 AAGGCCTAACTAAGAACAAATCCAAAGTATTCTCCTAATATTTATATGTATAGACACTCTATGTATAA 30 9716014 0.942748006 7 29 168 0.96875 1.491361694 0.03125 0.066666667 0.125 30 1 0 31 2R:9715986-9716053 6 dap FBtr0088469 9715082 9716256 AGTATT 6mer2-7 dme-miR-8-3p 2R + 9715982 9716029 3'utr dap FlyBase G10963.1 TTGTAAGGCCTAACTAAGAACAAATCCAAAGTATTCTCCTAATATTTA 21 9716014 0.968472255 7 19 106 0.862068966 0.920818754 0 0.285714286 0.482758621 21 2 2 25 2R:9715982-9716029 6 21.5 1896 FBgn0010316 804.5033333 38.63 59.20333333 0.026724563 0.556562257 0.363155228 -3 -3 -3 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2R 9845106 9845112 + 2R_9845106_9845112_+ 0.82334386 0.823338963 0.823341412 3.46E-06 CG1667 FBtr0345019|FBtr0345020 9845083|9845083 9845512|9845512 2R + 9845001 9845170 stop_codon CG1667 FlyBase G14436.1 AAGGGCAACCTGGTGGATGTTGGCGAATTGCTTGTAGCTCATATGCAAAACAAAACCAAAACTATTGACGAAATTTCCAACTAAGACTTGAAATCAAAAACGATTCCAAAGATTACGTTTTTTAATAATATATATCTATATATTGTAGTAATACCAAATTATTCTAGTTT 156 9845104 0.857336545 20 148 830 0.952631579 1.78055732 0.036842105 0.198717949 0.342105263 156 7 2 181 2R:9845001-9845170 7 CG1667 FBtr0345019|FBtr0345020 9845083|9845083 9845512|9845512 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 9844999 9845127 stop_codon CG1667 FlyBase G10980.1 GCAAGGGCAACCTGGTGGATGTTGGCGAATTGCTTGTAGCTCATATGCAAAACAAAACCAAAACTATTGACGAAATTTCCAACTAAGACTTGAAATCAAAAACGATTCCAAAGATTACGTTTTTTAATA 107 9845104 0.95303902 15 105 488 0.97515528 2.195899652 0.043478261 0.345794393 0.565217391 107 4 0 157 2R:9844999-9845127 7 83 1897 FBgn0033453 439.85 39.39 60.12 0.188700693 2.10713379 1.380572189 2 2 2 0.1 dme-miR-304-5p 6mer2-7 GAGATT 2R 9850774 9850779 - 2R_9850774_9850779_- 0.999350195 0.999906057 0.999628126 0.000393081 CG1516 FBtr0088457|FBtr0088460|FBtr0088459|FBtr0088454|FBtr0088455|FBtr0088462|FBtr0088458|FBtr0088461|FBtr0088456|FBtr0300850 9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701 9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136 2R - 9850753 9850803 3'utr CG1516 FlyBase G21511.1 TTTTAATTCGCAAACACCTGTGTCGAGATTCCCCCTCTAGTAAATACGTAA 26 9850775 0.768568444 5 25 162 0.972222222 1.544068044 0.361111111 0.307692308 0.5 26 1 0 35 2R:9850753-9850803 6 CG1516 FBtr0088456|FBtr0300850|FBtr0088455|FBtr0088462|FBtr0088458|FBtr0088461|FBtr0088459|FBtr0088454|FBtr0088457|FBtr0088460 9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701 9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136 GAGATT 6mer2-7 dme-miR-304-5p 2R - 9850750 9850796 3'utr CG1516 FlyBase G16335.1 TCGCAAACACCTGTGTCGAGATTCCCCCTCTAGTAAATACGTAAGTG 17 9850775 0.962663073 4 17 99 1 1.397940009 0.12 0.352941176 0.56 17 0 0 25 2R:9850750-9850796 6 20.5 1898 FBgn0027580 357.3333333 9.89 15.28666667 0.057369403 2.072800809 1.341037942 -4 -4 -4 0.1 dme-miR-184-5p 6mer3-8 TGATAA 2R 9851055 9851060 - 2R_9851055_9851060_- 0.999992983 0.999998915 0.999995949 4.17E-06 CG1516 FBtr0088457|FBtr0088460|FBtr0088459|FBtr0088454|FBtr0088455|FBtr0088462|FBtr0088458|FBtr0088461|FBtr0088456|FBtr0300850 9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701 9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136 2R - 9850989 9851089 3'utr CG1516 FlyBase G21513.1 ACACCCAATGTAAAATTAAGTGAAAACAGTGATAATCTTAGGGACTCTGTCAGTTCGATTGATCATAAAACTGTCCAAAGTCGCCTGTGTCTATTTTTATA 25 9851069 0.98500596 9 20 167 0.821428571 1.361727836 0.071428571 0.166666667 0.285714286 24 5 0 23 2R:9850989-9851089 6 CG1516 FBtr0088456|FBtr0300850|FBtr0088455|FBtr0088462|FBtr0088458|FBtr0088461|FBtr0088459|FBtr0088454|FBtr0088457|FBtr0088460 9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701 9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136 TGATAA 6mer3-8 dme-miR-184-5p 2R - 9851051 9851103 3'utr CG1516 FlyBase G16337.2 AGCTGCCACCGCACACACCCAATGTAAAATTAAGTGAAAACAGTGATAATCTT 14 9851069 0.975918626 5 12 72 0.9 1.255272505 0.05 0.357142857 0.55 14 2 0 18 2R:9851051-9851103 6 14.5 1899 FBgn0027580 357.3333333 9.89 15.28666667 0.040578358 1.466127401 0.948539032 9 9 9 0.1 dme-miR-277-3p 6mer3-8 TGCATT 2R 9876442 9876447 - 2R_9876442_9876447_- 0.998805771 0.999999896 0.999402834 0.000844356 Sec24AB FBtr0339406|FBtr0088451|FBtr0339407 9876230|9876230|9876230 9877125|9877125|9877125 2R - 9876409 9876517 3'utr Sec24AB FlyBase G21535.1 GAAAGGCGTTTTGTTGCACTGTAGTTAGCGAACTTATTTCAAACGTATGTACGGATTTGGTATTGTGTATTGCATTCATTGGACTGCTAGGCAGTGAATGTCTTAAGCT 69 9876438 0.732930427 18 68 583 0.986666667 1.568201724 0.24 0.072463768 0.146666667 69 0 1 74 2R:9876409-9876517 6 Sec24AB FBtr0339407|FBtr0088451|FBtr0339406 9876230|9876230|9876230 9877125|9877125|9877125 TGCATT 6mer3-8 dme-miR-277-3p 2R - 9876291 9876548 3'utr Sec24AB FlyBase G16349.1 AGAGAAATCTATATTTATTTATAAGTGTAAGGAAAGGCGTTTTGTTGCACTGTAGTTAGCGAACTTATTTCAAACGTATGTACGGATTTGGTATTGTGTATTGCATTCATTGGACTGCTAGGCAGTGAATGTCTTAAGCTTAGAAGGAATATTATACTGTATCAATAAAGAGACCCCATCCCTGTACCTCAGGTGGCGCAGTTGTCGTTCTTTGAGTGGGCTAACTAATCGAAAAACCATATACAAATACTGTACCAT 71 9876438 0.984972783 17 68 552 0.973451327 2.041392685 0.17699115 0.408450704 0.628318584 71 3 0 110 2R:9876291-9876548 6 48.5 1900 FBgn0033460 661.8766667 16.61 25.35 0.073276492 2.919927754 1.91321499 -9 -9 -9 0.1 dme-miR-1012-3p 6mer2-7 TGACTA 2R 9877042 9877047 - 2R_9877042_9877047_- 0.999990639 0.999998658 0.999994648 5.73E-06 Sec24AB FBtr0339406|FBtr0088451|FBtr0339407 9876230|9876230|9876230 9877125|9877125|9877125 2R - 9876985 9877145 stop_codon Sec24AB FlyBase G21539.1 TTCGGGCTCAGGTTAAATAGTATATAAGCAGGATATCCTACCACTATTGTATGCAGCATAAATACGAGTTTCTAAGAACCTAAAAACTCAGACTCTGGTGACTAGAAGCACGAAGCGAATGCAGGTGACACTGGTGCGAAACAATGGAGACCAGTTCGGGA 45 9877050 0.997688203 14 44 226 0.980392157 1.698970004 0.078431373 0.133333333 0.235294118 45 1 0 50 2R:9876985-9877145 6 Sec24AB FBtr0339407|FBtr0088451|FBtr0339406 9876230|9876230|9876230 9877125|9877125|9877125 TGACTA 6mer2-7 dme-miR-1012-3p 2R - 9877003 9877122 3'utr Sec24AB FlyBase G16352.1 ATAAGCAGGATATCCTACCACTATTGTATGCAGCATAAATACGAGTTTCTAAGAACCTAAAAACTCAGACTCTGGTGACTAGAAGCACGAAGCGAATGCAGGTGACACTGGTGCGAAACA 39 9877050 0.865125135 13 36 188 0.966666667 1.763427994 0.15 0.358974359 0.583333333 39 2 0 58 2R:9877003-9877122 6 17.5 1901 FBgn0033460 661.8766667 16.61 25.35 0.026439971 1.053582179 0.690335306 3 3 3 0.1 dme-miR-965-3p 7mer-m8 TACGCTT 2R 9882784 9882790 - 2R_9882784_9882790_- 0.620190826 0.620163505 0.620177166 1.93E-05 CG1513 FBtr0331955|FBtr0088450|FBtr0302176 9882570|9882570|9882570 9883756|9883756|9884080 2R - 9882753 9882843 3'utr CG1513 FlyBase G21563.1 TCTACCGACTACTCTCACGCAAAGTTAACGCAAAATGAAACGAATAAAGTAAATACGCTTCGAAATTGATTTAAAGTAATATTTAACGAAC 32 9882790 0.957203199 6 31 151 0.976190476 1.612783857 0.333333333 0.21875 0.404761905 32 1 0 41 2R:9882753-9882843 7 CG1513 FBtr0088450|FBtr0302176|FBtr0331955 9882570|9882570|9882570 9883756|9884080|9883756 TACGCTT 7mer-m8 dme-miR-965-3p 2R - 9882769 9882803 3'utr CG1513 FlyBase G16371.1 CGAATAAAGTAAATACGCTTCGAAATTGATTTAAA 17 9882790 0.838328462 2 16 77 0.925925926 1.397940009 0.333333333 0.411764706 0.62962963 17 2 0 25 2R:9882769-9882803 7 21.5 1902 FBgn0033463 1345.3 46.16 70.75666667 0.015981565 0.465771231 0.303858294 0 0 0 0.1 dme-miR-14-3p 6mer3-8 AAGACT 2R 9883202 9883207 - 2R_9883202_9883207_- 0.888656048 0.866214719 0.877435383 0.015868395 CG1513 FBtr0331955|FBtr0088450|FBtr0302176 9882570|9882570|9882570 9883756|9883756|9884080 2R - 9883185 9883224 3'utr CG1513 FlyBase G21565.1 TTCTATTTTTGAAATAAAAGACTCTGCTATAGACGAAATA 26 9883200 0.786648378 2 24 146 0.970588235 1.51851394 0 0.269230769 0.441176471 26 1 0 33 2R:9883185-9883224 6 CG1513 FBtr0088450|FBtr0302176|FBtr0331955 9882570|9882570|9882570 9883756|9884080|9883756 AAGACT 6mer3-8 dme-miR-14-3p 2R - 9883175 9883283 3'utr CG1513 FlyBase G16373.1 AATGGGATATATCAAAAGTTGTAGATTACAAAATGATAGTTACTTAAGGATAATAGAGATTCTATTTTTGAAATAAAAGACTCTGCTATAGACGAAATACAATACCGAC 33 9883200 0.976595416 10 30 189 0.909090909 1.22184875 0 0.484848485 0.690909091 33 3 2 50 2R:9883175-9883283 6 26 1903 FBgn0033463 1345.3 46.16 70.75666667 0.019326544 0.563258232 0.367456541 -7 -7 -7 0.1 dme-miR-1007-3p 6mer3-8 TGAGCT 2R 9916217 9916222 - 2R_9916217_9916222_- 0.999992002 0.999999894 0.999995948 5.59E-06 Mef2 FBtr0330707|FBtr0088445|FBtr0330708|FBtr0088444|FBtr0088446|FBtr0088447|FBtr0088443 9915500|9913494|9915500|9916116|9916116|9913494|9916116 9916745|9916745|9916454|9916745|9916745|9916745|9916745 2R - 9916195 9916232 3'utr Mef2 FlyBase G21585.1 GTTAGAGTGTTGAGCTGATTTAGTTTAGTTACAATTAC 6 9916214 0.706100947 4 6 63 1 1.041392685 0.909090909 0.5 0.727272727 6 0 0 11 2R:9916195-9916232 6 Mef2 FBtr0088446|FBtr0088447|FBtr0088443|FBtr0330707|FBtr0088445|FBtr0330708|FBtr0088444 9916116|9913494|9916116|9915500|9913494|9915500|9916116 9916745|9916745|9916745|9916745|9916745|9916454|9916745 TGAGCT 6mer3-8 dme-miR-1007-3p 2R - 9916201 9916234 3'utr Mef2 FlyBase G16385.1 ATGTTAGAGTGTTGAGCTGATTTAGTTTAGTTAC 9 9916222 0.776739322 4 7 106 0.733333333 0.740362689 0.6 0.555555556 0.733333333 9 3 1 11 2R:9916201-9916234 6 6.5 1904 FBgn0011656 531.1733333 15.92 24.39333333 0.01223706 0.408291457 0.266466248 -8 0 -4 0.1 dme-miR-307a-3p 6mer2-7 GTTGTG 2R 9962774 9962779 + 2R_9962774_9962779_+ 0.509756385 0.661144077 0.585450231 0.107047269 Pal1 FBtr0339422 9962739 9963031 2R + 9962747 9962821 3'utr Pal1 FlyBase G14480.2 GTGCTAACTCCTCACTCAATGTCCTGTGTTGTGCTGTCACACTTAACTGATTTAGTGTCCTGTACTTATAAGCTC 174 9962766 0.820377491 19 165 1679 0.955445545 1.507406059 0.173267327 0.137931034 0.257425743 174 4 5 193 2R:9962747-9962821 6 Pal1 FBtr0339422 9962739 9963031 GTTGTG 6mer2-7 dme-miR-307a-3p 2R + 9962747 9962821 3'utr Pal1 FlyBase G11011.1 GTGCTAACTCCTCACTCAATGTCCTGTGTTGTGCTGTCACACTTAACTGATTTAGTGTCCTGTACTTATAAGCTC 98 9962766 0.809110673 16 95 910 0.981707317 1.90579588 0.18902439 0.428571429 0.658536585 98 2 1 161 2R:9962747-9962821 6 109 1905 FBgn0033466 329.6666667 20.27 30.62666667 0.330637007 5.377405032 3.558989987 8 8 8 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 9962909 9962915 + 2R_9962909_9962915_+ 0.661615645 0.661615645 0.661615645 0 Pal1 FBtr0339422 9962739 9963031 2R + 9962864 9962930 3'utr Pal1 FlyBase G14481.1 ACGCTTTTTTTGGTGTCGTTAATTACACAGCATGTCCACTTCTTGTGTGTTCTGTATTCGTTGGCTT 14 9962916 0.659987744 6 13 153 0.944444444 1.230448921 0.055555556 0.142857143 0.333333333 14 1 0 17 2R:9962864-9962930 7 Pal1 FBtr0339422 9962739 9963031 TGTGTTC 7mer-m8 dme-miR-317-3p 2R + 9962890 9962948 3'utr Pal1 FlyBase G11012.1 ACAGCATGTCCACTTCTTGTGTGTTCTGTATTCGTTGGCTTACTTTTCGTTCAACTTTA 17 9962907 0.992088512 7 14 165 1 1.397940009 0 0.352941176 0.56 17 0 0 25 2R:9962890-9962948 7 11 1906 FBgn0033466 329.6666667 20.27 30.62666667 0.033367037 0.542673902 0.359164127 -7 2 -2.5 0.1 dme-miR-277-3p 6mer3-8 TGCATT 2R 9993395 9993400 + 2R_9993395_9993400_+ 0.98931679 0.999991635 0.994654213 0.007548223 TER94 FBtr0112906|FBtr0343852|FBtr0112905|FBtr0088391 9993076|9993076|9993076|9993076 9993559|9993559|9993559|9993559 2R + 9993360 9993420 3'utr TER94 FlyBase G14504.1 TGGCGAACTATTCCGCGCCTCACACTAATCATTCGTGCATTGTCGGTAGAGTGGCTCCGAT 21 9993400 0.789374731 4 18 166 0.869565217 0.698970004 0.043478261 0.095238095 0.173913043 21 0 3 20 2R:9993360-9993420 6 TER94 FBtr0088391|FBtr0112905|FBtr0343852|FBtr0112906 9993076|9993076|9993076|9993076 9993559|9993559|9993559|9993559 TGCATT 6mer3-8 dme-miR-277-3p 2R + 9993352 9993429 3'utr TER94 FlyBase G11038.1 ATTTTAATTGGCGAACTATTCCGCGCCTCACACTAATCATTCGTGCATTGTCGGTAGAGTGGCTCCGATATATGAGTT 9 9993400 0.978635808 7 9 62 1 1.204119983 0.0625 0.444444444 0.6875 9 0 0 16 2R:9993352-9993429 6 11.5 1907 FBgn0261014 4646.64 184.35 281.7433333 0.002474907 0.06238134 0.040817292 -5 -5 -5 0.1 dme-miR-252-5p 6mer3-8 GTACTT 3L 10220647 10220652 - 3L_10220647_10220652_- 0.999998689 0.999994096 0.999996392 3.25E-06 scramb1 FBtr0076301|FBtr0076303|FBtr0076302 10220483|10220483|10220481 10221072|10221072|10221072 3L - 10220625 10220693 3'utr scramb1 FlyBase G35927.1 GAAGCGACAACTAACTAACGAATGATTCGTTATTGAAACATGTACTTTAAACTGTATGTTAAGTGTCTT 16 10220653 0.942159545 6 14 136 0.944444444 1.230448921 0.111111111 0.125 0.222222222 16 1 0 17 3L:10220625-10220693 6 scramb1 FBtr0076302|FBtr0076303|FBtr0076301 10220481|10220483|10220483 10221072|10221072|10221072 GTACTT 6mer3-8 dme-miR-252-5p 3L - 10220629 10220704 3'utr scramb1 FlyBase G27180.1 ATTGATGCTCTGAAGCGACAACTAACTAACGAATGATTCGTTATTGAAACATGTACTTTAAACTGTATGTTAAGTG 11 10220653 0.989309492 6 11 101 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 3L:10220629-10220704 6 9.5 1908 FBgn0052056 455.3333333 27.11666667 41.42333333 0.020863836 0.350338045 0.229339342 1 1 1 0.1 dme-miR-79-3p 7mer-A1 AGCTTTA 3L 10220719 10220725 - 3L_10220719_10220725_- 0.82334954 0.823348096 0.823348818 9.90E-07 scramb1 FBtr0076301|FBtr0076303|FBtr0076302 10220483|10220483|10220481 10221072|10221072|10221072 3L - 10220711 10220742 3'utr scramb1 FlyBase G35928.1 GTATTCAACGACAAATCAGCTTTATTTATGAA 8 10220727 0.970590523 2 8 50 1 1.041392685 0.181818182 0.25 0.454545455 8 0 0 11 3L:10220711-10220742 7 scramb1 FBtr0076302|FBtr0076303|FBtr0076301 10220481|10220483|10220483 10221072|10221072|10221072 AGCTTTA 7mer-A1 dme-miR-79-3p 3L - 10220706 10220758 3'utr scramb1 FlyBase G27181.1 CAATTACTTGTGTAAAGTATTCAACGACAAATCAGCTTTATTTATGAATTTTG 14 10220727 0.962669746 4 13 102 1 1.278753601 0.157894737 0.214285714 0.421052632 14 0 0 19 3L:10220706-10220758 7 10 1909 FBgn0052056 455.3333333 27.11666667 41.42333333 0.021961933 0.36877689 0.241409833 2 2 2 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA 3L 10220846 10220851 - 3L_10220846_10220851_- 0.996022721 0.65176225 0.823892485 0.243428934 scramb1 FBtr0076301|FBtr0076303|FBtr0076302 10220483|10220483|10220481 10221072|10221072|10221072 3L - 10220793 10220856 3'utr scramb1 FlyBase G35929.1 AATTTTGATGAACATACTGAACTCAGGCTTCCTTCGAGAGGACATTGCCAGAATATAAAACTAA 15 10220839 0.850880838 8 14 83 0.9 1.255272505 0.35 0.333333333 0.5 15 2 0 18 3L:10220793-10220856 6 scramb1 FBtr0076302|FBtr0076303|FBtr0076301 10220481|10220483|10220483 10221072|10221072|10221072 TGATGA 6mer3-8 dme-miR-2a-2-5p 3L - 10220781 10220870 3'utr scramb1 FlyBase G27182.1 TGAAACTCCTTGTTAATTTTGATGAACATACTGAACTCAGGCTTCCTTCGAGAGGACATTGCCAGAATATAAAACTAACTTTAAGTTAGC 14 10220839 0.972983514 7 14 82 1 1.301029996 0.4 0.357142857 0.55 14 0 0 20 3L:10220781-10220870 6 7 1910 FBgn0052056 455.3333333 27.11666667 41.42333333 0.015373353 0.258143823 0.168986883 -12 -12 -12 0.1 dme-miR-7-5p 6mer3-8 GTCTTC 3L 10220909 10220914 - 3L_10220909_10220914_- 0.999820174 0.999499402 0.999659788 0.00022684 scramb1 FBtr0076301|FBtr0076303|FBtr0076302 10220483|10220483|10220481 10221072|10221072|10221072 3L - 10220890 10220952 3'utr scramb1 FlyBase G35930.1 TTTATCCAAATATCTTCCCGGTGAACTGTCGCGTACTAGTCTTCTGTACCAAATGCTTATTGA 34 10220911 0.709349063 7 31 253 0.976744186 1.62324929 0.139534884 0.264705882 0.418604651 34 1 0 42 3L:10220890-10220952 6 scramb1 FBtr0076302|FBtr0076303|FBtr0076301 10220481|10220483|10220483 10221072|10221072|10221072 GTCTTC 6mer3-8 dme-miR-7-5p 3L - 10220894 10220944 3'utr scramb1 FlyBase G27183.1 AATATCTTCCCGGTGAACTGTCGCGTACTAGTCTTCTGTACCAAATGCTTA 27 10220910 0.969422433 3 27 207 1 1.662757832 0.173913043 0.444444444 0.673913043 27 0 0 46 3L:10220894-10220944 6 27 1911 FBgn0052056 455.3333333 27.11666667 41.42333333 0.059297218 0.995697603 0.65180655 -3 -4 -3.5 0.1 dme-bantam-3p 6mer2-7 GATCTC 3L 1037688 1037693 - 3L_1037688_1037693_- 0.740041554 0.997773197 0.868907375 0.182243762 bab1 FBtr0333268|FBtr0333270|FBtr0333269|FBtr0072642 1036367|1036367|1036367|1036367 1038321|1038321|1038321|1038321 3L - 1037667 1037704 3'utr bab1 FlyBase G33216.1 AAATAGCGACCGATCTCTTTAGTTGTAAGCTACAGCGA 12 1037686 0.672499411 4 12 96 1 1.113943352 0 0.083333333 0.153846154 12 0 0 13 3L:1037667-1037704 6 bab1 FBtr0333268|FBtr0333270|FBtr0333269|FBtr0072642 1036367|1036367|1036367|1036367 1038321|1038321|1038321|1038321 GATCTC 6mer2-7 dme-bantam-3p 3L - 1037662 1037701 3'utr bab1 FlyBase G25132.1 TAGCGACCGATCTCTTTAGTTGTAAGCTACAGCGAAGGTG 5 1037685 0.973966038 3 5 38 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3L:1037662-1037701 6 8 1912 FBgn0004870 53 1.19 1.816666667 0.150943396 6.722689076 4.403669725 -7 -8 -7.5 0.1 dme-miR-12-5p 7mer-A1 ATACTCA 3L 10590722 10590728 + 3L_10590722_10590728_+ 0.822575902 0.812759696 0.817667799 0.006941102 A2bp1 FBtr0305093|FBtr0305094|FBtr0113418|FBtr0305096|FBtr0305097|FBtr0332985|FBtr0113419|FBtr0305095 10590564|10590564|10590564|10590564|10590564|10590564|10590208|10590564 10593403|10590925|10590967|10593403|10590967|10594012|10590967|10594012 3L + 10590693 10590740 3'utr A2bp1 FlyBase G29407.1 GAAGTTACAACTAAACCGATAGATGCAGGATACTCAACACCCAACAGC 15 10590716 0.890983034 3 15 45 1 1.255272505 0.055555556 0.2 0.333333333 15 0 0 18 3L:10590693-10590740 7 A2bp1 FBtr0305095|FBtr0113419|FBtr0332985|FBtr0305097|FBtr0305096|FBtr0113418|FBtr0305094|FBtr0305093 10590564|10590208|10590564|10590564|10590564|10590564|10590564|10590564 10594012|10590967|10594012|10590967|10593403|10590967|10590925|10593403 ATACTCA 7mer-A1 dme-miR-12-5p 3L + 10590688 10590736 3'utr A2bp1 FlyBase G22254.1 AAGTAGAAGTTACAACTAAACCGATAGATGCAGGATACTCAACACCCAA 9 10590715 0.920407786 2 8 30 0.857142857 1.079181246 0 0.333333333 0.571428571 9 2 0 12 3L:10590688-10590736 7 12 1913 FBgn0052062 354.2866667 11.58666667 17.8 0.033870877 1.035673188 0.674157303 6 7 6.5 0.1 dme-miR-12-5p 8mer-A1 AATACTCA 3L 10591456 10591463 + 3L_10591456_10591463_+ 0.576553639 0.614848024 0.595700832 0.02707823 A2bp1 FBtr0305093|FBtr0305096|FBtr0332985|FBtr0305095 10590564|10590564|10590564|10590564 10593403|10593403|10594012|10594012 3L + 10591429 10591490 5'utr A2bp1 FlyBase G29411.1 ATATATCTATAATTTGATTACCCAAAGAATACTCATTTCTGTATTGTACCGTATTGTCAACG 17 10591465 0.986713624 5 17 178 1 1.278753601 0.157894737 0.117647059 0.210526316 17 0 0 19 3L:10591429-10591490 8 A2bp1 FBtr0305095|FBtr0332985|FBtr0305096|FBtr0305093 10590564|10590564|10590564|10590564 10594012|10594012|10593403|10593403 AATACTCA 8mer-A1 dme-miR-12-5p 3L + 10591442 10591495 5'utr A2bp1 FlyBase G22255.1 TTGATTACCCAAAGAATACTCATTTCTGTATTGTACCGTATTGTCAACGAATTT 10 10591465 0.990367559 6 10 95 1 1.204119983 0 0.3 0.5625 10 0 0 16 3L:10591442-10591495 8 12.5 1914 FBgn0052062 354.2866667 11.58666667 17.8 0.035282163 1.078826237 0.702247191 -9 -9 -9 0.1 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 10591542 10591549 + 3L_10591542_10591549_+ 0.668734338 0.668734329 0.668734334 0 A2bp1 FBtr0305093|FBtr0305096|FBtr0332985|FBtr0305095 10590564|10590564|10590564|10590564 10593403|10593403|10594012|10594012 3L + 10591502 10591688 5'utr A2bp1 FlyBase G29412.1 AATGCATTGCTTGGTTGTTCCTAATAATTTTATATATTTTGGCAGCTAAAACCACTCACACTCAACTCACGACTCAATTCGAATTGCTCAAAAAAAAATCGTAGCGCATAGGTAAATGCAAAAGATCAACACGTAGACATATCCTTGGAATATACAATAATATTTACTTTAAATGCCGCCATAGCAG 121 10591541 0.983832149 19 112 862 0.927631579 1.848189117 0.019736842 0.214876033 0.375 121 10 1 141 3L:10591502-10591688 8 A2bp1 FBtr0305095|FBtr0332985|FBtr0305096|FBtr0305093 10590564|10590564|10590564|10590564 10594012|10594012|10593403|10593403 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L + 10591502 10591564 5'utr A2bp1 FlyBase G22256.1 AATGCATTGCTTGGTTGTTCCTAATAATTTTATATATTTTGGCAGCTAAAACCACTCACACTC 74 10591541 0.769587865 12 67 530 0.919191919 1.658011397 0 0.256756757 0.444444444 74 7 1 91 3L:10591502-10591564 8 82.5 1915 FBgn0052062 354.2866667 11.58666667 17.8 0.232862277 7.120253165 4.634831461 1 1 1 0.1 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 10592110 10592117 + 3L_10592110_10592117_+ 0.66873434 0.668734344 0.668734342 0 A2bp1 FBtr0305093|FBtr0305096|FBtr0332985|FBtr0305095 10590564|10590564|10590564|10590564 10593403|10593403|10594012|10594012 3L + 10592071 10592136 5'utr A2bp1 FlyBase G29413.1 ATGCTCAATGGAAAATAAGCGAACAAACTTTGATTCTTAGGCAGCTACTGTCGTCAAATTTAAACT 76 10592108 0.988454678 11 69 628 0.913978495 1.327358934 0.161290323 0.197368421 0.344086022 76 5 3 85 3L:10592071-10592136 8 A2bp1 FBtr0305095|FBtr0332985|FBtr0305096|FBtr0305093 10590564|10590564|10590564|10590564 10594012|10594012|10593403|10593403 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L + 10592087 10592133 5'utr A2bp1 FlyBase G22258.1 AAGCGAACAAACTTTGATTCTTAGGCAGCTACTGTCGTCAAATTTAA 56 10592108 0.800372247 9 51 483 0.93258427 1.618048097 0.247191011 0.428571429 0.640449438 56 5 1 83 3L:10592087-10592133 8 65 1916 FBgn0052062 354.2866667 11.58666667 17.8 0.183467249 5.609896433 3.651685393 2 2 2 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3L 10592578 10592583 + 3L_10592578_10592583_+ 0.974966839 0.934342105 0.954654472 0.028726001 A2bp1 FBtr0305093|FBtr0305096|FBtr0332985|FBtr0305095 10590564|10590564|10590564|10590564 10593403|10593403|10594012|10594012 3L + 10592560 10592650 5'utr A2bp1 FlyBase G29415.1 ACGTTGACATTTTTAAAGCCAAAGTTTATATTTTAAATGATTTTTAGTTAGGTATTAGTTCGTATGCTGACGACAGATGACACAAATGGAT 13 10592584 0.987204723 7 13 117 1 1.146128036 0 0.076923077 0.142857143 13 0 0 14 3L:10592560-10592650 6 A2bp1 FBtr0305095|FBtr0332985|FBtr0305096|FBtr0305093 10590564|10590564|10590564|10590564 10594012|10594012|10593403|10593403 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 10592560 10592638 5'utr A2bp1 FlyBase G22259.1 ACGTTGACATTTTTAAAGCCAAAGTTTATATTTTAAATGATTTTTAGTTAGGTATTAGTTCGTATGCTGACGACAGATG 14 10592584 0.886481091 7 12 122 0.80952381 1.230448921 0.19047619 0.428571429 0.619047619 14 4 0 17 3L:10592560-10592638 6 6.5 1917 FBgn0052062 354.2866667 11.58666667 17.8 0.018346725 0.560989643 0.365168539 -6 -6 -6 0.1 dme-miR-1003-3p 6mer2-7 TGTGAG 3L 10641055 10641060 - 3L_10641055_10641060_- 0.999998837 0.99999342 0.999996129 3.82E-06 CG32066 FBtr0076278|FBtr0076277 10640284|10640414 10641200|10641200 3L - 10640962 10641079 3'utr CG32066 FlyBase G35946.1 TGTATTATTTGTAAAAAATTGTGAGCGAGTGTTGTGCTAGCAGGAGGCAACCTCTAGTTTTATTTTTACCCTGTGTGCATTTCCAGCATTTGTTTCGTACTGTTTTAGACTCCAGCCT 65 10641061 0.947171997 9 61 465 0.951219512 1.892094603 0.146341463 0.169230769 0.341463415 65 4 0 78 3L:10640962-10641079 6 CG32066 FBtr0076277|FBtr0076278 10640414|10640284 10641200|10641200 TGTGAG 6mer2-7 dme-miR-1003-3p 3L - 10641035 10641085 3'utr CG32066 FlyBase G27193.1 GGCTTCTGTATTATTTGTAAAAAATTGTGAGCGAGTGTTGTGCTAGCAGGA 52 10641061 0.75648163 6 47 369 0.884615385 1.838849091 0.205128205 0.423076923 0.615384615 52 9 0 69 3L:10641035-10641085 6 53 1918 FBgn0052066 3082.423333 164.4233333 252.2266667 0.017194264 0.322338679 0.210128456 1 1 1 0.1 dme-miR-283-5p 8mer-m1 TGATATTT 3L 10664398 10664405 + 3L_10664398_10664405_+ 0.546582559 0.55559373 0.551088144 0.00637181 CG32068 FBtr0113421 10664364 10664435 3L + 10664374 10664433 3'utr CG32068 FlyBase G29436.1 AATCTTATCTTTTACCATCAAGTTTGATATTTTGAAATATAAAATCGCTGTGTATAATCA 21 10664397 0.793768151 8 20 189 0.96 1.380211242 0.2 0.095238095 0.24 21 1 0 24 3L:10664374-10664433 8 CG32068 FBtr0113421 10664364 10664435 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 10664382 10664415 3'utr CG32068 FlyBase G22277.1 CTTTTACCATCAAGTTTGATATTTTGAAATATAA 8 10664397 0.757373083 3 6 72 0.818181818 0.954242509 0.090909091 0.375 0.545454545 8 2 0 9 3L:10664382-10664415 8 10 1919 FBgn0052068 230.5566667 42.00666667 63.54666667 0.043373285 0.238057451 0.157364666 1 1 1 0.1 dme-miR-33-5p 7mer-A1 AATGCAA 3L 10689467 10689473 + 3L_10689467_10689473_+ 0.782891335 0.78289162 0.782891478 2.12E-07 simj FBtr0331574 10689109 10690734 3L + 10689391 10689493 3'utr simj FlyBase G29447.1 AGTTTCCCTTTTTGTTACACCACTGCATTACATATTTTAATTAATTTGCCAGCCAGAATATAGCAGCCGATAAATGAATGCAAACTTTTAAGCTCCTAGTAAT 53 10689465 0.965463571 9 51 279 0.96875 1.792391689 0.046875 0.169811321 0.3125 53 2 0 62 3L:10689391-10689493 7 simj FBtr0331574 10689109 10690734 AATGCAA 7mer-A1 dme-miR-33-5p 3L + 10689450 10689490 3'utr simj FlyBase G22282.1 ATAGCAGCCGATAAATGAATGCAAACTTTTAAGCTCCTAGT 19 10689465 0.839271138 2 18 96 0.935483871 0.985276743 0 0.473684211 0.677419355 19 0 2 29 3L:10689450-10689490 7 32.5 1920 FBgn0010762 1928.513333 47.80333333 73.36666667 0.01685236 0.679868907 0.442980463 2 2 2 0.1 dme-miR-995-5p 6mer3-8 AATTCG 3L 10689723 10689728 + 3L_10689723_10689728_+ 0.988682693 0.999318549 0.994000621 0.007520646 simj FBtr0331574 10689109 10690734 3L + 10689710 10689756 3'utr simj FlyBase G29449.1 AATTTTGTCGTACAATTCGTTTAGTTCTTAGCATCGTGAATAAATCT 14 10689725 0.792464415 7 12 137 0.866666667 1.113943352 0 0.071428571 0.133333333 14 2 0 13 3L:10689710-10689756 6 simj FBtr0331574 10689109 10690734 AATTCG 6mer3-8 dme-miR-995-5p 3L + 10689710 10689757 3'utr simj FlyBase G22284.1 AATTTTGTCGTACAATTCGTTTAGTTCTTAGCATCGTGAATAAATCTA 9 10689725 0.805875635 4 9 95 1 1.113943352 0 0.222222222 0.461538462 9 0 0 13 3L:10689710-10689757 6 9 1921 FBgn0010762 1928.513333 47.80333333 73.36666667 0.004666807 0.18827139 0.122671513 -2 -2 -2 0.1 dme-miR-283-5p 8mer-A1 TGATATTA 3L 10691907 10691914 + 3L_10691907_10691914_+ 0.592192289 0.592192179 0.592192234 7.07E-08 CG11811 FBtr0076265 10691876 10692598 3L + 10691876 10691953 stop_codon CG11811 FlyBase G29452.1 AAGGCGAAGCATTTTGCGGACGAATGTAGAATGATATTAACCTCAATGGGGTGGGGGTAGAAATTGTTTGTGAACTGA 23 10691912 0.91703048 11 22 141 0.962962963 1.414973348 0.074074074 0.173913043 0.296296296 23 1 0 26 3L:10691876-10691953 8 CG11811 FBtr0076265 10691876 10692598 TGATATTA 8mer-A1 dme-miR-283-5p 3L + 10691847 10691956 stop_codon CG11811 FlyBase G22287.1 GAAGCAGGGAGTATCAGTTAACTTGAATTAAGGCGAAGCATTTTGCGGACGAATGTAGAATGATATTAACCTCAATGGGGTGGGGGTAGAAATTGTTTGTGAACTGATCG 29 10691922 0.974754139 12 28 172 0.953488372 1.612783857 0.093023256 0.379310345 0.581395349 29 2 0 41 3L:10691847-10691956 8 17 1922 FBgn0036099 1176.04 91.50333333 140.2833333 0.014455291 0.185785582 0.121183319 -5 -15 -10 0.1 dme-miR-932-5p 7mer-A1 GAATTGA 3L 10874507 10874513 + 3L_10874507_10874513_+ 0.823318489 0.823320361 0.823319425 1.34E-06 tna FBtr0076268|FBtr0301658|FBtr0076267 10874466|10874466|10874466 10875743|10876496|10874646 3L + 10874486 10874619 5'utr tna FlyBase G29488.1 CGAAGCTGGGAGAGAGTTGGAGAATTGAAGTGGCAGAATACCATAAATTGTATATAGTATTATTAATTTTAATGAAATGTGCACTAGACGCCAGTCGCGTACTTCAACCAACATTTTCGTTTCCTCACACAAAC 225 10874503 0.799852762 23 203 1561 0.902040816 1.566241023 0.363265306 0.08 0.155102041 225 19 5 221 3L:10874486-10874619 7 tna FBtr0301658|FBtr0076267|FBtr0076268 10874466|10874466|10874466 10876496|10874646|10875743 GAATTGA 7mer-A1 dme-miR-932-5p 3L + 10874486 10874597 5'utr tna FlyBase G22312.1 CGAAGCTGGGAGAGAGTTGGAGAATTGAAGTGGCAGAATACCATAAATTGTATATAGTATTATTAATTTTAATGAAATGTGCACTAGACGCCAGTCGCGTACTTCAACCAAC 182 10874503 0.766769667 25 157 1145 0.88030888 1.579783597 0.498069498 0.324175824 0.525096525 182 26 5 228 3L:10874486-10874597 7 131.5 1923 FBgn0026160 929.45 23.40666667 36.18333333 0.141481521 5.618057533 3.634269922 4 4 4 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3L 10874758 10874764 + 3L_10874758_10874764_+ 0.441285076 0.442359456 0.441822266 0.000759716 tna FBtr0076268|FBtr0301658 10874466|10874466 10875743|10876496 3L + 10874687 10874816 5'utr tna FlyBase G29489.1 ATTACAAACAACACACTGGATGAGAAATCGAAGCGGAAATTTGAATTTGCCCGTGTTGAAAAACAATGAAATGTGATTTAAAAATTAATTAATTAAATTAATTGGCATTTAATTTAAAGCTAACTGAGAA 448 10874764 0.980464226 19 440 3252 0.984819734 2.414137362 0.024667932 0.149553571 0.277039848 448 7 1 519 3L:10874687-10874816 7 tna FBtr0301658|FBtr0076268 10874466|10874466 10876496|10875743 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 10874686 10874791 5'utr tna FlyBase G22313.1 TATTACAAACAACACACTGGATGAGAAATCGAAGCGGAAATTTGAATTTGCCCGTGTTGAAAAACAATGAAATGTGATTTAAAAATTAATTAATTAAATTAATTGG 341 10874764 0.982790011 16 330 2490 0.975609756 1.865301426 0.017738359 0.272727273 0.450110865 341 6 5 440 3L:10874686-10874791 7 373 1924 FBgn0026160 929.45 23.40666667 36.18333333 0.401312604 15.93563087 10.30861354 -6 -6 -6 0.1 dme-miR-79-3p 6mer3-8 TAGCTT 3L 10875278 10875283 + 3L_10875278_10875283_+ 0.999999996 1 0.999999998 0 tna FBtr0076268|FBtr0301658 10874466|10874466 10875743|10876496 3L + 10875198 10875297 5'utr tna FlyBase G29492.1 AATGAAAACATTTACATTTTAATTGTTGCATAATTTTAATTATTTTTTAAAGCCTATCTACATATTAAAAGTAAATGATTTAGCTTGGTAAACGATAAAC 25 10875277 0.981358984 9 25 190 1 1.477121255 0.2 0.2 0.333333333 25 0 0 30 3L:10875198-10875297 6 tna FBtr0301658|FBtr0076268 10874466|10874466 10876496|10875743 TAGCTT 6mer3-8 dme-miR-79-3p 3L + 10875261 10875291 5'utr tna FlyBase G22317.1 ATTAAAAGTAAATGATTTAGCTTGGTAAACG 15 10875277 0.642842143 4 15 96 1 1.397940009 0.4 0.466666667 0.68 15 0 0 25 3L:10875261-10875291 6 17 1925 FBgn0026160 929.45 23.40666667 36.18333333 0.018290387 0.726288807 0.469829572 1 1 1 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3L 10895050 10895056 - 3L_10895050_10895056_- 0.438650929 0.439366597 0.439008763 0.000506076 Aps FBtr0076250|FBtr0076252 10894774|10894774 10896130|10896130 3L - 10895020 10895080 3'utr Aps FlyBase G35978.1 CGAAGAAGAGGAGCATGTTATCAATGTGATTTAAGAGATACAAGATACATACGAGTTAAAC 84 10895050 0.984960126 6 81 653 0.972222222 1.720159303 0.240740741 0.226190476 0.398148148 84 2 1 105 3L:10895020-10895080 7 Aps FBtr0076252|FBtr0076250 10894774|10894774 10896130|10896130 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 10895029 10895078 3'utr Aps FlyBase G27212.1 AAGAAGAGGAGCATGTTATCAATGTGATTTAAGAGATACAAGATACATAC 62 10895050 0.937353226 6 58 478 0.928571429 1.892094603 0.261904762 0.241935484 0.44047619 62 6 0 78 3L:10895029-10895078 7 72 1926 FBgn0036111 1989.25 99.36 152.7433333 0.036194546 0.724637681 0.471379002 -6 -6 -6 0.1 dme-miR-968-5p 6mer3-8 ACTACT 3L 10895162 10895167 - 3L_10895162_10895167_- 0.999999716 1 0.999999858 2.12E-07 Aps FBtr0076250|FBtr0076252 10894774|10894774 10896130|10896130 3L - 10895138 10895181 3'utr Aps FlyBase G35980.1 TATGAACTAATTCAACTACTAAGATACGTGCACGTTGTACTTTT 5 10895164 0.987905902 4 4 36 0.833333333 0.698970004 0 0.2 0.333333333 5 1 0 5 3L:10895138-10895181 6 Aps FBtr0076252|FBtr0076250 10894774|10894774 10896130|10896130 ACTACT 6mer3-8 dme-miR-968-5p 3L - 10895128 10895183 3'utr Aps FlyBase G27213.1 ATTATGAACTAATTCAACTACTAAGATACGTGCACGTTGTACTTTTCAGATGCAAA 6 10895162 0.966027961 4 6 33 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 3L:10895128-10895183 6 4 1927 FBgn0036111 1989.25 99.36 152.7433333 0.002010808 0.040257649 0.026187722 -3 -5 -4 0.1 dme-miR-283-5p 8mer-m1 TGATATTT 3L 11059485 11059492 + 3L_11059485_11059492_+ 0.401860161 0.529259402 0.465559781 0.090084838 CG7888 FBtr0076200|FBtr0076199|FBtr0076201 11059249|11059249|11059249 11059659|11059659|11059659 3L + 11059455 11059522 3'utr CG7888 FlyBase G29503.1 TGTGTATTTGTATAGAATTTAACAGATTTGTGATATTTTTAGCGTCATGCCCAAGAATCTGTACAACA 88 11059481 0.821243861 12 82 894 0.956521739 1.56427143 0.043478261 0.227272727 0.408695652 88 3 2 110 3L:11059455-11059522 8 CG7888 FBtr0076201|FBtr0076200|FBtr0076199 11059249|11059249|11059249 11059659|11059659|11059659 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 11059458 11059526 3'utr CG7888 FlyBase G22326.2 GTATTTGTATAGAATTTAACAGATTTGTGATATTTTTAGCGTCATGCCCAAGAATCTGTACAACAAACG 43 11059481 0.811333434 11 39 396 0.867647059 1.071882007 0.088235294 0.441860465 0.647058824 43 5 4 59 3L:11059458-11059526 8 56 1928 FBgn0036116 3.67 0.246666667 0.366666667 15.25885559 227.027027 152.7272727 4 4 4 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 11059589 11059594 - 3L_11059589_11059594_- 0.999389116 0.999995941 0.999692529 0.000429072 CG6321 FBtr0076242 11059435 11059678 3L - 11059575 11059614 3'utr CG6321 FlyBase G35994.1 TTTAAATATGACTTAAAAGGATGTGACTGTGCACTAAACT 6 11059591 0.792210932 3 6 33 1 0.77815125 0 0 0 6 0 0 6 3L:11059575-11059614 6 CG6321 FBtr0076242 11059435 11059678 ATGTGA 6mer3-8 dme-miR-1003-3p 3L - 11059567 11059607 3'utr CG6321 FlyBase G27224.1 ATGACTTAAAAGGATGTGACTGTGCACTAAACTACTTATCA 5 11059592 0.952780089 3 5 27 1 0.84509804 0 0.2 0.428571429 5 0 0 7 3L:11059567-11059607 6 5 1929 FBgn0036117 179.99 13.81333333 21.14333333 0.027779321 0.361969112 0.23648116 -3 -2 -2.5 0.1 dme-bantam-3p 7mer-A1 GATCTCA 3L 11065892 11065898 + 3L_11065892_11065898_+ 0.823082921 0.822810372 0.822946646 0.000192687 CG45101 FBtr0344636 11065373 11069025 3L + 11065871 11065945 3'utr CG45101 FlyBase G29508.1 AGCCAACTACGGAGCATTGGAGATCTCAGTCGCCTCAAGTTCGACTACATTATGGTGGATAATCGGGGGCATTCG 29 11065887 0.762199209 7 28 169 0.96875 1.491361694 0.21875 0.103448276 0.1875 29 1 0 31 3L:11065871-11065945 7 CG45101 FBtr0344636 11065373 11069025 GATCTCA 7mer-A1 dme-bantam-3p 3L + 11065868 11065907 3'utr CG45101 FlyBase G22330.1 TGGAGCCAACTACGGAGCATTGGAGATCTCAGTCGCCTCA 13 11065887 0.766055596 4 13 60 1 1.255272505 0.111111111 0.307692308 0.5 13 0 0 18 3L:11065868-11065907 7 17 1930 FBgn0266540 111.74 3.59 5.523333333 0.152138894 4.735376045 3.077851539 5 5 5 0.1 dme-bantam-3p 6mer2-7 GATCTC 3L 11066225 11066230 + 3L_11066225_11066230_+ 0.999993341 0.999999999 0.99999667 4.74E-06 CG45101 FBtr0344636 11065373 11069025 3L + 11066211 11066235 3'utr CG45101 FlyBase G29509.1 TCAGTAAGCGCATAGATCTCGAGGA 6 11066223 0.758607848 2 4 18 0.857142857 0.77815125 0.571428571 0.166666667 0.285714286 6 1 0 6 3L:11066211-11066235 6 CG45101 FBtr0344636 11065373 11069025 GATCTC 6mer2-7 dme-bantam-3p 3L + 11066211 11066238 3'utr CG45101 FlyBase G22332.1 TCAGTAAGCGCATAGATCTCGAGGAATA 7 11066223 0.896611907 2 5 24 0.8 1.079181246 0 0.857142857 0.933333333 7 3 0 12 3L:11066211-11066238 6 6.5 1931 FBgn0266540 111.74 3.59 5.523333333 0.058170754 1.810584958 1.176825588 2 2 2 0.1 dme-bantam-3p 8mer-A1 TGATCTCA 3L 11066820 11066827 + 3L_11066820_11066827_+ 0.631135016 0.631135233 0.631135124 1.41E-07 CG45101 FBtr0344636 11065373 11069025 3L + 11066791 11066844 3'utr CG45101 FlyBase G29510.1 AGCAAAAAAACGTCACCGCGCAAAAAAGCTGATCTCACCGATTCCGAAGAGGAT 26 11066820 0.919586977 3 24 79 0.933333333 1.447158031 0.4 0.115384615 0.233333333 26 2 0 28 3L:11066791-11066844 8 CG45101 FBtr0344636 11065373 11069025 TGATCTCA 8mer-A1 dme-bantam-3p 3L + 11066799 11066839 3'utr CG45101 FlyBase G22333.1 AACGTCACCGCGCAAAAAAGCTGATCTCACCGATTCCGAAG 16 11066820 0.920649309 3 16 39 1 1.322219295 0.238095238 0.25 0.428571429 16 0 0 21 3L:11066799-11066839 8 21 1932 FBgn0266540 111.74 3.59 5.523333333 0.187936281 5.849582173 3.802051901 0 0 0 0.1 dme-miR-307a-3p 6mer2-7 GTTGTG 3L 11079930 11079935 - 3L_11079930_11079935_- 0.999999945 0.991541017 0.995770481 0.005981346 JIL-1 FBtr0332707|FBtr0076237 11078750|11078750 11080622|11080622 3L - 11079913 11080039 5'utr JIL-1 FlyBase G36018.1 AAGATTTGCAATTAGTTTAGTGCAAAATTATGATTAAGACAAAATTGAGAAAGATATTCTTAGGGCGCCTATATTATATACACTACACACACAGTTTGCTTTTAGTTGTGCTTTATGTTAAGTTATA 59 11079927 0.990652986 16 57 585 0.95890411 1.367976785 0.109589041 0.186440678 0.342465753 59 1 2 70 3L:11079913-11080039 6 JIL-1 FBtr0076237|FBtr0332707 11078750|11078750 11080622|11080622 GTTGTG 6mer2-7 dme-miR-307a-3p 3L - 11079912 11079948 5'utr JIL-1 FlyBase G27235.1 CAGTTTGCTTTTAGTTGTGCTTTATGTTAAGTTATAT 18 11079927 0.75766104 3 18 212 1 1.462397998 0.137931034 0.444444444 0.655172414 18 0 0 29 3L:11079912-11079948 6 30.5 1933 FBgn0020412 872.0633333 16.06666667 24.67666667 0.034974524 1.898340249 1.235985411 -8 -8 -8 0.1 dme-miR-14-3p 6mer3-8 AAGACT 3L 11112028 11112033 + 3L_11112028_11112033_+ 0.999809361 0.998842188 0.999325774 0.000683914 CG7638 FBtr0076210 11111863 11112117 3L + 11112014 11112063 3'utr CG7638 FlyBase G29528.1 TAAAGTGTGTTTTAAAGACTTTTAACCAGGCTGCCCGGAGAGTAACCAAA 35 11112035 0.819411551 5 35 252 1 1.612783857 0.243902439 0.171428571 0.292682927 35 0 0 41 3L:11112014-11112063 6 CG7638 FBtr0076210 11111863 11112117 AAGACT 6mer3-8 dme-miR-14-3p 3L + 11111992 11112062 3'utr CG7638 FlyBase G22341.1 ATACTACCTAACTCATTGTTTATAAAGTGTGTTTTAAAGACTTTTAACCAGGCTGCCCGGAGAGTAACCAA 30 11112035 0.750377306 5 28 232 0.926829268 1.579783597 0.219512195 0.366666667 0.536585366 30 3 0 38 3L:11111992-11112062 6 27 1934 FBgn0036133 348.3333333 22.38666667 34.17666667 0.077511962 1.206075045 0.790012679 -7 -7 -7 0.1 dme-miR-1006-3p 6mer2-7 GAATTT 3L 11114974 11114979 - 3L_11114974_11114979_- 0.999987243 0.999999998 0.999993621 9.05E-06 fd68A FBtr0300785|FBtr0300786|FBtr0300784|FBtr0301967|FBtr0300783|FBtr0332654|FBtr0332653|FBtr0332652 11114268|11114167|11114167|11114167|11114268|11114268|11114167|11114167 11115084|11115084|11115084|11115084|11115084|11115084|11115084|11115042 3L - 11114967 11115009 3'utr fd68A FlyBase G36059.1 AAACAAAAAAGTATCTCCATCTTGTATATTGAATTTGCCAATC 8 11114997 0.977652188 5 6 77 0.777777778 0.84509804 0 0.125 0.222222222 8 2 0 7 3L:11114967-11115009 6 fd68A FBtr0332652|FBtr0332653|FBtr0332654|FBtr0300783|FBtr0301967|FBtr0300784|FBtr0300786|FBtr0300785 11114167|11114167|11114268|11114268|11114167|11114167|11114167|11114268 11115042|11115084|11115084|11115084|11115084|11115084|11115084|11115084 GAATTT 6mer2-7 dme-miR-1006-3p 3L - 11114970 11115006 3'utr fd68A FlyBase G27261.1 CAAAAAAGTATCTCCATCTTGTATATTGAATTTGCCA 8 11114987 0.883761298 5 6 70 0.875 0.84509804 0 0.5 0.75 8 1 1 14 3L:11114970-11115006 6 7 1935 FBgn0036134 852.62 30.46666667 46.7 0.008209988 0.2297593 0.149892934 18 8 13 0.1 dme-miR-932-5p 7mer-A1 GAATTGA 3L 11178282 11178288 - 3L_11178282_11178288_- 0.823349562 0.823349562 0.823349562 0 GlcAT-P FBtr0076190|FBtr0306254|FBtr0076189|FBtr0100422|FBtr0306255 11176952|11176952|11176952|11176952|11176952 11178417|11178417|11178417|11178417|11178417 3L - 11178246 11178320 3'utr GlcAT-P FlyBase G36087.2 AGGTACAATCCGGCGCACGGAGATACCAATCAGAATTGATCAGATCATTAGTCGGTGTACATTATTATCATAATC 78 11178285 0.736333693 10 72 412 0.948979592 1.667452953 0.214285714 0.207792208 0.37755102 77 4 1 93 3L:11178246-11178320 7 GlcAT-P FBtr0076190|FBtr0306255|FBtr0100422|FBtr0076189|FBtr0306254 11176952|11176952|11176952|11176952|11176952 11178417|11178417|11178417|11178417|11178417 GAATTGA 7mer-A1 dme-miR-932-5p 3L - 11178167 11178318 3'utr GlcAT-P FlyBase G27282.2 GTACAATCCGGCGCACGGAGATACCAATCAGAATTGATCAGATCATTAGTCGGTGTACATTATTATCATAATCATATGATTAGTTAGGCTCTAAGCGCACACATACCTATGATAATTCTTTGCACCGTAGTCTTTGTTTGTTCGCACACCTA 77 11178285 0.746255967 19 73 461 0.930434783 2.029383778 0.156521739 0.363636364 0.573913043 77 8 0 107 3L:11178167-11178318 7 61.5 1936 FBgn0036144 1851.176667 64.88333333 98.86 0.033222113 0.947855125 0.622091847 -3 -3 -3 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA 3L 11227856 11227861 + 3L_11227856_11227861_+ 0.893976724 0.877709663 0.885843194 0.011502506 CG42671 FBtr0304934|FBtr0302699|FBtr0302696|FBtr0302697|FBtr0330283|FBtr0339906|FBtr0304933 11227708|11227708|11227708|11227708|11227741|11227708|11227708 11229635|11228546|11228546|11228546|11228546|11230512|11229635 3L + 11227832 11227881 3'utr CG42671 FlyBase G29560.1 AAACATGCCACACGATCTAACATGGTGCAAGCAGCAGCGGCAGCAGCAGA 33 11227854 0.908619258 2 31 97 0.976190476 1.311753861 0.523809524 0.151515152 0.333333333 33 0 1 41 3L:11227832-11227881 6 CG42671 FBtr0302696|FBtr0302699|FBtr0304934|FBtr0304933|FBtr0339906|FBtr0330283|FBtr0302697 11227708|11227708|11227708|11227708|11227708|11227741|11227708 11228546|11228546|11229635|11229635|11230512|11228546|11228546 GTGCAA 6mer3-8 dme-miR-92b-3p 3L + 11227836 11227876 3'utr CG42671 FlyBase G22362.1 ATGCCACACGATCTAACATGGTGCAAGCAGCAGCGGCAGCA 20 11227854 0.907060548 2 20 63 1 1.579783597 0.473684211 0.55 0.763157895 20 0 0 38 3L:11227836-11227876 6 26 1937 FBgn0261553 751.82 16.21 24.91666667 0.034582746 1.60394818 1.043478261 2 2 2 0.1 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3L 11229809 11229814 + 3L_11229809_11229814_+ 0.937035183 0.947885282 0.942460233 0.007672179 CG42671 FBtr0345849|FBtr0339906|FBtr0339907 11229352|11227708|11229352 11230745|11230512|11230512 3L + 11229789 11229834 3'utr CG42671 FlyBase G29563.1 TATTCTAGCATTGTCGACTTTGGTGCAAATAACTTAAATATTATAC 33 11229809 0.751763781 4 32 278 0.975 1.591064607 0.1 0.181818182 0.325 33 1 0 39 3L:11229789-11229834 6 CG42671 FBtr0345849|FBtr0339907|FBtr0339906 11229352|11229352|11227708 11230745|11230512|11230512 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3L + 11229787 11229828 3'utr CG42671 FlyBase G22366.1 GATATTCTAGCATTGTCGACTTTGGTGCAAATAACTTAAATA 29 11229808 0.761275036 3 27 230 0.975 1.591064607 0.175 0.310344828 0.5 29 1 0 39 3L:11229787-11229828 6 30.5 1938 FBgn0261553 751.82 16.21 24.91666667 0.040568221 1.881554596 1.224080268 0 1 0.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 3L 11254488 11254493 + 3L_11254488_11254493_+ 1 1 1 0 scyl FBtr0076168|FBtr0339908 11254474|11254474 11255243|11256172 3L + 11254435 11254665 stop_codon scyl FlyBase G29573.2 CCCATAGACCCAGTGCGGCCATCGCCACGCCCACCAACTAATGGTGATCAGCTTGATCTGTCAGATATGCATATGTTCGTATATGTGTCTGCGCGAAACAAAAAAAACACCACCCCTGTGATGATCGAGAGCAGTAGTTTGTTGCAGTTTGAAGTGCAACAACGAAGCAAGTATTCGAAGCCACCCCACCTACACCACACACACACACACACAAACACCTTTAATACACAC 974 11254488 0.826653055 34 923 7015 0.937552743 1.966532813 0.401687764 0.169404517 0.317299578 974 63 11 1111 3L:11254435-11254665 6 scyl FBtr0076168|FBtr0339908 11254474|11254474 11255243|11256172 TGATCT 6mer3-8 dme-bantam-3p 3L + 11254433 11254530 stop_codon scyl FlyBase G22379.1 CGCCCATAGACCCAGTGCGGCCATCGCCACGCCCACCAACTAATGGTGATCAGCTTGATCTGTCAGATATGCATATGTTCGTATATGTGTCTGCGCGA 530 11254488 0.919211239 16 507 4036 0.955762515 1.914343157 0.464493597 0.435849057 0.651920838 530 29 9 821 3L:11254433-11254530 6 655.5 1939 FBgn0041094 3053.616667 135.47 208.0166667 0.214663486 4.838709677 3.151189809 0 0 0 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 11255018 11255024 + 3L_11255018_11255024_+ 0.754178725 0.754178781 0.754178753 7.07E-08 scyl FBtr0076168|FBtr0076168|FBtr0076168|FBtr0339908|FBtr0339908|FBtr0339908 11254474|11254474|11254474|11254474|11254474|11254474 11255243|11255243|11255243|11256172|11256172|11256172 3L + 11254967 11255101 3'utr scyl FlyBase G29576.1 ATATTTCTGGGGCATTCGCTTTGGGGCTCGCCGGTCGACAACTCATGAATATGTGATACTGTTTAAGATGCTAAGAGTTTTTTGCCGGATGCACCAAAGTCCGGCAAAAGACGTTGATAAAATTACACATAACAC 379 11255013 0.814937502 27 324 2884 0.860759494 2.133538908 0.297468354 0.213720317 0.371308017 379 64 2 408 3L:11254967-11255101 7 scyl FBtr0076168|FBtr0076168|FBtr0076168|FBtr0339908|FBtr0339908|FBtr0339908 11254474|11254474|11254474|11254474|11254474|11254474 11255243|11255243|11255243|11256172|11256172|11256172 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 11254915 11255103 3'utr scyl FlyBase G22383.1 AAACCAACATGAAATTCAAAGACGACAGCCCCACGAATCAATCCCCAGAATCATATTTCTGGGGCATTCGCTTTGGGGCTCGCCGGTCGACAACTCATGAATATGTGATACTGTTTAAGATGCTAAGAGTTTTTTGCCGGATGCACCAAAGTCCGGCAAAAGACGTTGATAAAATTACACATAACACAC 313 11255013 0.999641769 30 260 2304 0.834728033 1.822821645 0.336820084 0.370607029 0.587866109 313 74 5 399 3L:11254915-11255103 7 240.5 1940 FBgn0041094 3053.616667 135.47 208.0166667 0.078759067 1.775300805 1.156157359 5 5 5 0.1 dme-bantam-3p 6mer3-8 TGATCT 3L 11255249 11255254 + 3L_11255249_11255254_+ 0.999954419 0.999961228 0.999957824 4.81E-06 scyl FBtr0339908 11254474 11256172 3L + 11255198 11255347 3'utr scyl FlyBase G29578.1 AATTGTATGCTATATAGTAATAAACAAAGAAACCAACAAAACAAACAAACTTGATCTTGGTAAATTTAAAATTTAACTTTAAAACTGAGAGAGATGAGGGCCTCGAACTGTGAAAGAGGTAGATGATCACACGCTCCAATTTTAGTTAGA 776 11255249 0.925336931 25 730 4868 0.950052029 1.638251483 0.043704475 0.176546392 0.335067638 776 28 20 913 3L:11255198-11255347 6 scyl FBtr0339908 11254474 11256172 TGATCT 6mer3-8 dme-bantam-3p 3L + 11255235 11255366 3'utr scyl FlyBase G22384.1 AAAACAAACAAACTTGATCTTGGTAAATTTAAAATTTAACTTTAAAACTGAGAGAGATGAGGGCCTCGAACTGTGAAAGAGGTAGATGATCACACGCTCCAATTTTAGTTAGACGCAGCTTGCTGCAATAAA 603 11255249 0.872144453 28 570 3535 0.947194719 1.573275315 0.053905391 0.354892206 0.572057206 603 26 22 861 3L:11255235-11255366 6 565.5 1941 FBgn0041094 3053.616667 135.47 208.0166667 0.185190239 4.174355946 2.718532169 0 0 0 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 11255584 11255589 + 3L_11255584_11255589_+ 0.997149902 0.998755918 0.99795291 0.001135613 scyl FBtr0339908 11254474 11256172 3L + 11255549 11255676 3'utr scyl FlyBase G29580.1 AAGCATAAAATTTAAGGCAATGAATATCTCAGTAAATGTGAAAGCGTAAAAAATTTGTAAAATTTTTTTGTCTGTGTAAAAACTCCCAATGCGATATGAAAACAAAAACTTAAATGTAGCTGCAAAAA 193 11255581 0.925267651 13 186 1116 0.953974895 1.512836807 0.058577406 0.196891192 0.351464435 193 5 6 228 3L:11255549-11255676 6 scyl FBtr0339908 11254474 11256172 ATGTGA 6mer3-8 dme-miR-1003-3p 3L + 11255561 11255603 3'utr scyl FlyBase G22387.1 TAAGGCAATGAATATCTCAGTAAATGTGAAAGCGTAAAAAATT 123 11255581 0.776072078 7 114 714 0.940540541 1.763427994 0.021621622 0.333333333 0.556756757 123 9 2 174 3L:11255561-11255603 6 133.5 1942 FBgn0041094 3053.616667 135.47 208.0166667 0.043718651 0.985458035 0.641775499 3 3 3 0.1 dme-miR-980-5p 7mer-m8 GAAAAAC 3L 11255873 11255879 + 3L_11255873_11255879_+ 0.705949576 0.558026791 0.631988184 0.104597215 scyl FBtr0339908 11254474 11256172 3L + 11255823 11255941 3'utr scyl FlyBase G29582.1 ACAAACACACACGAAAGTATCTATTACCAGCAAAAAGTATCTATCAAAGCGAAAAACCTATTTATTACAAAAAGAGAGAGAGAGAGAAAGAAATAAACAAGCAAAATACGAAAAAAATA 29 11255864 0.999869779 11 27 101 0.9375 1.176091259 0.125 0.103448276 0.1875 29 1 1 30 3L:11255823-11255941 7 scyl FBtr0339908 11254474 11256172 GAAAAAC 7mer-m8 dme-miR-980-5p 3L + 11255830 11255960 3'utr scyl FlyBase G22388.2 CACACGAAAGTATCTATTACCAGCAAAAAGTATCTATCAAAGCGAAAAACCTATTTATTACAAAAAGAGAGAGAGAGAGAAAGAAATAAACAAGCAAAATACGAAAAAAATACATGTATTAATTTTTTATT 35 11255847 0.967835434 11 24 110 0.722222222 0.892094603 0.259259259 0.457142857 0.648148148 35 11 4 39 3L:11255830-11255960 7 7.5 1943 FBgn0041094 3053.616667 135.47 208.0166667 0.002456104 0.055362811 0.036054803 9 26 17.5 0.1 dme-miR-1003-3p 7mer-A1 TGTGAGA 3L 11256039 11256045 + 3L_11256039_11256045_+ 0.823348702 0.823346028 0.823347365 1.91E-06 scyl FBtr0339908 11254474 11256172 3L + 11256013 11256061 3'utr scyl FlyBase G29583.1 TTTATTGCGTAAAACAACAAAATAATTGTGAGAAATTTGTAACCAAAAC 25 11256038 0.698190375 5 25 143 1 1.505149978 0.25 0.16 0.34375 25 0 0 32 3L:11256013-11256061 7 scyl FBtr0339908 11254474 11256172 TGTGAGA 7mer-A1 dme-miR-1003-3p 3L + 11256020 11256062 3'utr scyl FlyBase G22389.1 CGTAAAACAACAAAATAATTGTGAGAAATTTGTAACCAAAACA 23 11256038 0.962665033 2 23 122 1 1.51851394 0.181818182 0.391304348 0.575757576 23 0 0 33 3L:11256020-11256062 7 24 1944 FBgn0041094 3053.616667 135.47 208.0166667 0.007859533 0.177160995 0.115375371 1 1 1 0.1 dme-miR-932-5p 7mer-A1 GAATTGA 3L 11288177 11288183 - 3L_11288177_11288183_- 0.730906403 0.731595819 0.731251111 0.000487479 CG6175 FBtr0076183|FBtr0333389|FBtr0333388 11287934|11287934|11287934 11288850|11288850|11288850 3L - 11288157 11288193 3'utr CG6175 FlyBase G36135.1 AAACGAACGCGAATTGATTGCAAAATGTCTACATGTA 11 11288179 0.959792709 2 11 62 1 1.079181246 0 0.090909091 0.166666667 11 0 0 12 3L:11288157-11288193 7 CG6175 FBtr0333389|FBtr0333388|FBtr0076183 11287934|11287934|11287934 11288850|11288850|11288850 GAATTGA 7mer-A1 dme-miR-932-5p 3L - 11288157 11288190 3'utr CG6175 FlyBase G27317.1 CGAACGCGAATTGATTGCAAAATGTCTACATGTA 5 11288179 0.864773898 3 5 27 1 0.903089987 0.625 0.4 0.625 5 0 0 8 3L:11288157-11288190 7 8 1945 FBgn0036152 153.01 4.68 7.153333333 0.052284164 1.709401709 1.118359739 -4 -4 -4 0.1 dme-miR-980-3p 6mer3-8 GGCAGC 3L 1140740 1140745 - 3L_1140740_1140745_- 0.888078988 0.998774352 0.94342667 0.078273468 bab2 FBtr0333271|FBtr0072639 1140427|1140427 1141967|1141967 3L - 1140731 1140761 3'utr bab2 FlyBase G33217.1 ATGGGCAAACAACGCAGGCAGCATCACATTA 15 1140738 0.901957716 2 15 14 1 1.230448921 0.176470588 0.133333333 0.235294118 15 0 0 17 3L:1140731-1140761 6 bab2 FBtr0333271|FBtr0072639 1140427|1140427 1141967|1141967 GGCAGC 6mer3-8 dme-miR-980-3p 3L - 1140705 1140763 3'utr bab2 FlyBase G25133.1 GAATGGGCAAACAACGCAGGCAGCATCACATTAAATTTGTGCTAATTTTATGTAAACAA 10 1140738 0.931752518 3 10 36 1 1.255272505 0.444444444 0.4 0.666666667 10 0 0 18 3L:1140705-1140763 6 11 1946 FBgn0025525 40 0.97 1.503333333 0.275 11.34020619 7.317073171 -7 -7 -7 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 3L 1141097 1141103 - 3L_1141097_1141103_- 0.620203839 0.620204122 0.62020398 2.12E-07 bab2 FBtr0333271|FBtr0072639 1140427|1140427 1141967|1141967 3L - 1141083 1141124 3'utr bab2 FlyBase G33220.1 AAAGTTACGATTAGAGACTTGTGCATTTCTTAAATGTAGCTT 9 1141103 0.975095415 3 9 61 1 1 0 0.111111111 0.2 9 0 0 10 3L:1141083-1141124 7 bab2 FBtr0333271|FBtr0072639 1140427|1140427 1141967|1141967 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 1141067 1141131 3'utr bab2 FlyBase G25135.1 AAACATTAAAGTTACGATTAGAGACTTGTGCATTTCTTAAATGTAGCTTAACCCTAGAATAGCCC 11 1141104 0.982455407 6 11 84 1 1.204119983 0.0625 0.363636364 0.5625 11 0 0 16 3L:1141067-1141131 7 9 1947 FBgn0025525 40 0.97 1.503333333 0.225 9.278350515 5.986696231 0 1 0.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 3L 11495244 11495249 + 3L_11495244_11495249_+ 0.999975604 0.999988892 0.999982248 9.40E-06 chrb FBtr0076093|FBtr0344910 11495094|11495094 11499055|11499055 3L + 11495178 11495267 3'utr chrb FlyBase G29589.1 AACAGCAGCAATCGCAATACGAACATCTATTGGTTGTGCCTCCTTCGTCGCAATAGCCAAGATTCATGATCTTCATTATGGAATATAGAG 31 11495244 0.986331879 7 28 244 0.974358974 1.579783597 0.333333333 0.258064516 0.41025641 31 1 0 38 3L:11495178-11495267 6 chrb FBtr0076093|FBtr0344910 11495094|11495094 11499055|11499055 TGATCT 6mer3-8 dme-bantam-3p 3L + 11495223 11495294 3'utr chrb FlyBase G22393.1 CGTCGCAATAGCCAAGATTCATGATCTTCATTATGGAATATAGAGAGATGATGTTTAACCCTAGAGGCAAAC 14 11495244 0.989054931 3 13 108 0.952380952 1.301029996 0.142857143 0.285714286 0.523809524 14 1 0 20 3L:11495223-11495294 6 18.5 1948 FBgn0036165 903.39 19.18 29.98 0.02047842 0.964546403 0.617078052 0 0 0 0.1 dme-miR-970-3p 6mer3-8 TCTTAT 3L 11495452 11495457 + 3L_11495452_11495457_+ 0.99040434 0.975244635 0.982824488 0.010719527 chrb FBtr0076093|FBtr0344910 11495094|11495094 11499055|11499055 3L + 11495433 11495483 3'utr chrb FlyBase G29590.1 GTTGCAGGCAACTCAAAACTCTTATTGGACTGACTTTTTGGCTTAAACAAA 22 11495457 0.968234352 4 21 204 0.964285714 1.431363764 0 0.181818182 0.357142857 22 1 0 27 3L:11495433-11495483 6 chrb FBtr0076093|FBtr0344910 11495094|11495094 11499055|11499055 TCTTAT 6mer3-8 dme-miR-970-3p 3L + 11495443 11495482 3'utr chrb FlyBase G22394.1 ACTCAAAACTCTTATTGGACTGACTTTTTGGCTTAAACAA 14 11495457 0.758181299 3 14 118 1 1.230448921 0 0.142857143 0.294117647 14 0 0 17 3L:11495443-11495482 6 18 1949 FBgn0036165 903.39 19.18 29.98 0.019924949 0.938477581 0.600400267 -5 -5 -5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 11496018 11496024 + 3L_11496018_11496024_+ 0.74611518 0.719116065 0.732615623 0.019091247 chrb FBtr0076093|FBtr0076093|FBtr0076093|FBtr0344910|FBtr0344910|FBtr0344910 11495094|11495094|11495094|11495094|11495094|11495094 11499055|11499055|11499055|11499055|11499055|11499055 3L + 11495994 11496040 3'utr chrb FlyBase G29591.1 TAACAAATATAAAAACAAAGTTGATGTGATATTATATAATAATTATG 53 11496015 0.851912783 6 51 498 0.965517241 1.748188027 0.034482759 0.075471698 0.155172414 53 2 0 56 3L:11495994-11496040 7 chrb FBtr0076093|FBtr0076093|FBtr0076093|FBtr0344910|FBtr0344910|FBtr0344910 11495094|11495094|11495094|11495094|11495094|11495094 11499055|11499055|11499055|11499055|11499055|11499055 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 11495959 11496040 3'utr chrb FlyBase G22395.1 TCGATCAATCGAGGCAGAAAGAGGAAAGTTAATAATAACAAATATAAAAACAAAGTTGATGTGATATTATATAATAATTATG 43 11496015 0.989287264 8 39 372 0.933333333 1.748188027 0.05 0.372093023 0.55 43 4 0 56 3L:11495959-11496040 7 46 1950 FBgn0036165 903.39 19.18 29.98 0.050919315 2.398331595 1.534356237 3 3 3 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 3L 11496820 11496825 + 3L_11496820_11496825_+ 0.9999933 0.999999997 0.999996648 4.74E-06 chrb FBtr0076093|FBtr0344910 11495094|11495094 11499055|11499055 3L + 11496805 11496841 3'utr chrb FlyBase G29592.1 AAATATAAAGTCATCTGTGTTAATAAATTTTAAAATA 9 11496818 0.827834511 2 7 76 0.923076923 1.079181246 0 0.222222222 0.461538462 9 1 0 12 3L:11496805-11496841 6 chrb FBtr0076093|FBtr0344910 11495094|11495094 11499055|11499055 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 11496806 11496830 3'utr chrb FlyBase G22396.1 AATATAAAGTCATCTGTGTTAATAA 5 11496819 0.68393326 2 5 35 1 0.84509804 0 0.4 0.571428571 5 0 0 7 3L:11496806-11496830 6 6.5 1951 FBgn0036165 903.39 19.18 29.98 0.007195121 0.338894682 0.216811207 2 1 1.5 0.1 dme-miR-184-5p 6mer3-8 TGATAA 3L 11497179 11497184 + 3L_11497179_11497184_+ 0.958842579 0.99642958 0.97763608 0.026578023 chrb FBtr0076093|FBtr0344910 11495094|11495094 11499055|11499055 3L + 11497131 11497235 3'utr chrb FlyBase G29593.1 AATCAATCCCACAAAGATCTCGACTAATAAGATGAAGAACTCATTATATGATAAATGATAGAGCGGAAGGAAAATTACACAAGAGAAGATACAATTTAGATATTT 14 11497150 0.987619007 9 9 71 0.8 0.602059991 0.066666667 0.071428571 0.133333333 14 1 2 12 3L:11497131-11497235 6 chrb FBtr0076093|FBtr0344910 11495094|11495094 11499055|11499055 TGATAA 6mer3-8 dme-miR-184-5p 3L + 11497135 11497196 3'utr chrb FlyBase G22397.1 AATCCCACAAAGATCTCGACTAATAAGATGAAGAACTCATTATATGATAAATGATAGAGCGG 5 11497174 0.98591134 3 4 28 0.857142857 0.77815125 0.142857143 0.4 0.571428571 5 1 0 6 3L:11497135-11497196 6 3.5 1952 FBgn0036165 903.39 19.18 29.98 0.003874296 0.182481752 0.116744496 29 5 17 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA 3L 11563438 11563443 + 3L_11563438_11563443_+ 0.999402949 0.99936128 0.999382115 2.94E-05 CG7394 FBtr0333215|FBtr0305648 11563415|11563415 11564312|11564312 3L + 11563367 11563497 stop_codon CG7394 FlyBase G29597.1 TGGCGGCCAAGATCAACGAGGCCAAAGACTTTCTGGACAAAGCGAAGTAGTCATCCTCTCCCCGCCGTTCAGTGCAAATAAAGTAGTAGTTCGTGATTAGCATGTAAGCTGAAAGTCTTATGCGTTTTATT 88 11563435 0.874303925 14 85 526 0.96969697 1.681241237 0.232323232 0.113636364 0.212121212 88 2 1 96 3L:11563367-11563497 6 CG7394 FBtr0305648|FBtr0333215|FBtr0290024 11563415|11563415|11563415 11564312|11564312|11563828 GTGCAA 6mer3-8 dme-miR-92b-3p 3L + 11563381 11563478 stop_codon CG7394 FlyBase G22400.1 AACGAGGCCAAAGACTTTCTGGACAAAGCGAAGTAGTCATCCTCTCCCCGCCGTTCAGTGCAAATAAAGTAGTAGTTCGTGATTAGCATGTAAGCTGA 48 11563435 0.972904833 12 42 261 0.876923077 1.755874856 0.230769231 0.3125 0.492307692 48 8 0 57 3L:11563381-11563478 6 31 1953 FBgn0036173 327.5733333 73.10333333 113.5633333 0.094635298 0.424057271 0.272975432 3 3 3 0.1 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3L 11605486 11605491 - 3L_11605486_11605491_- 0.999980365 0.999988847 0.999984606 5.94E-06 CG6091 FBtr0273305|FBtr0273306 11605434|11605434 11606103|11606103 3L - 11605468 11605511 3'utr CG6091 FlyBase G36169.1 ATTTAATTGACTACAATAAATGGTGCATATTAATCGTAATTTAT 107 11605491 0.863624801 9 105 918 0.974789916 2.064457989 0.092436975 0.093457944 0.18487395 107 3 0 116 3L:11605468-11605511 6 CG6091 FBtr0273306|FBtr0273305 11605434|11605434 11606103|11606103 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3L - 11605468 11605511 3'utr CG6091 FlyBase G27342.1 ATTTAATTGACTACAATAAATGGTGCATATTAATCGTAATTTAT 67 11605491 0.866199681 6 67 570 1 1.944482672 0.090909091 0.23880597 0.420454545 67 0 0 88 3L:11605468-11605511 6 86 1954 FBgn0036180 776.52 29.66333333 45.66333333 0.110750528 2.899202158 1.88334915 0 0 0 0.1 dme-miR-1006-3p 6mer2-7 GAATTT 3L 11605703 11605708 - 3L_11605703_11605708_- 0.920165697 0.92611777 0.923141734 0.00420877 CG6091 FBtr0273305|FBtr0273306 11605434|11605434 11606103|11606103 3L - 11605675 11605721 3'utr CG6091 FlyBase G36171.1 TTTTACCATGAATGAATTTTCCCTCCACACCACGTTCCTTTTCCGAT 335 11605703 0.654217136 4 332 1999 0.993181818 2.163360182 0.454545455 0.241791045 0.422727273 335 1 2 437 3L:11605675-11605721 6 CG6091 FBtr0273306|FBtr0273305 11605434|11605434 11606103|11606103 GAATTT 6mer2-7 dme-miR-1006-3p 3L - 11605642 11605736 3'utr CG6091 FlyBase G27344.1 CAGCGTGTTATTTTTTTTTACCATGAATGAATTTTCCCTCCACACCACGTTCCTTTTCCGATAAAATAATGCCTATTTCGTAATTCGTCATAATG 243 11605703 0.970507416 9 241 1391 0.990936556 2.515873844 0.447129909 0.283950617 0.474320242 243 3 0 328 3L:11605642-11605736 6 284.5 1955 FBgn0036180 776.52 29.66333333 45.66333333 0.3663782 9.590965277 6.23038178 -5 -5 -5 0.1 dme-miR-980-5p 6mer3-8 GAAAAA 3L 11629763 11629768 + 3L_11629763_11629768_+ 0.999837607 0.999917157 0.999877382 5.63E-05 CG18815 FBtr0076103|FBtr0076105|FBtr0076104 11629606|11629606|11629606 11629992|11629992|11629992 3L + 11629745 11629776 3'utr CG18815 FlyBase G29615.1 ATTATGGAAATTATCACTGAAAAATCAATTCG 6 11629756 0.610569028 5 6 33 1 0.77815125 0.166666667 0 0 6 0 0 6 3L:11629745-11629776 6 CG18815 FBtr0076104|FBtr0076105|FBtr0076103 11629606|11629606|11629606 11629992|11629992|11629992 GAAAAA 6mer3-8 dme-miR-980-5p 3L + 11629738 11629783 3'utr CG18815 FlyBase G22410.1 TAGCCCAATTATGGAAATTATCACTGAAAAATCAATTCGAAAAGCA 5 11629748 0.793970976 3 5 34 1 0.903089987 0 0.4 0.625 5 0 0 8 3L:11629738-11629783 6 5 1956 FBgn0042138 741.6666667 76.60333333 116.84 0.006741573 0.065271311 0.042793564 7 15 11 0.1 dme-miR-11-3p 8mer-m1 CTGTGATG 3L 11642549 11642556 + 3L_11642549_11642556_+ 0.444876423 0.44980422 0.447340322 0.003484481 CG32091 FBtr0076106 11642492 11642902 3L + 11642497 11642597 3'utr CG32091 FlyBase G29620.1 TGAAACCAATATTCCAGATGAATCTTATCCCTAGCTTTAGGCAATGTCAATGCTGTGATGTTCGATTTTAAACAGACAGATAGATACTTCCTGTACATACT 56 11642547 0.985532041 11 55 457 0.986111111 1.851258349 0.111111111 0.196428571 0.375 56 1 0 71 3L:11642497-11642597 8 CG32091 FBtr0076106 11642492 11642902 CTGTGATG 8mer-m1 dme-miR-11-3p 3L + 11642523 11642574 3'utr CG32091 FlyBase G22414.1 ATCCCTAGCTTTAGGCAATGTCAATGCTGTGATGTTCGATTTTAAACAGACA 37 11642547 0.828858196 4 34 295 0.929824561 1.72427587 0.140350877 0.416666667 0.631578947 36 4 0 53 3L:11642523-11642574 8 41.5 1957 FBgn0052091 18 0.773333333 1.216666667 2.305555556 53.6637931 34.10958904 2 2 2 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 3L 11683771 11683777 + 3L_11683771_11683777_+ 0.782911671 0.782911773 0.782911722 7.07E-08 TfIIEalpha FBtr0076108 11683668 11683805 3L + 11683710 11683791 3'utr TfIIEalpha FlyBase G29637.1 GTTTCCCATCTCACGCATAGAGTCATTGTAATTTAAGTTACCCACTAGTTCGAGCGAATGTGTACAAATGAAATGCGTATAA 25 11683768 0.841836871 8 24 152 1 1.491361694 0.129032258 0.24 0.387096774 25 0 0 31 3L:11683710-11683791 7 TfIIEalpha FBtr0076108 11683668 11683805 GTACAAA 7mer-A1 dme-miR-305-5p 3L + 11683707 11683792 3'utr TfIIEalpha FlyBase G22426.1 CGAGTTTCCCATCTCACGCATAGAGTCATTGTAATTTAAGTTACCCACTAGTTCGAGCGAATGTGTACAAATGAAATGCGTATAAA 23 11683769 0.962600594 8 21 113 0.933333333 1.447158031 0.1 0.260869565 0.433333333 23 2 0 28 3L:11683707-11683792 7 17.5 1958 FBgn0015828 547.3633333 41.38 63.43333333 0.031971451 0.422909618 0.275880189 3 2 2.5 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 11688588 11688595 + 3L_11688588_11688595_+ 0.5001202 0.500120199 0.500120199 0 Sug FBtr0273362 11688459 11688825 3L + 11688565 11688617 3'utr Sug FlyBase G29641.1 ATGCAGTGGATACGCTGGCCATTGTACTTAAACCACCATATATTTTGTAAGAT 116 11688587 0.77378824 3 110 727 0.969924812 1.809559715 0.015037594 0.129310345 0.240601504 116 3 1 129 3L:11688565-11688617 8 Sug FBtr0273362 11688459 11688825 GTACTTAA 8mer-A1 dme-miR-252-5p 3L + 11688565 11688606 3'utr Sug FlyBase G22429.1 ATGCAGTGGATACGCTGGCCATTGTACTTAAACCACCATATA 71 11688587 0.759257945 2 71 424 1 2.017033339 0 0.352112676 0.557692308 71 0 0 104 3L:11688565-11688606 8 92.5 1959 FBgn0036191 390.82 14.43333333 22.11666667 0.236681848 6.408775982 4.18236624 1 1 1 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 3L 11689339 11689344 + 3L_11689339_11689344_+ 0.999739721 0.999882546 0.999811134 0.000100975 Sug FBtr0344966|FBtr0300100 11689180|11689180 11690155|11690155 3L + 11689309 11689393 3'utr Sug FlyBase G29642.1 ACTCCCGAGCTGCATGTTGAATCGATGTACTACCTGTATTGTAATCTCGCTTTAATTAAGTAGTAACTTATCTCAGTAGCCCCAC 106 11689334 0.824744584 11 103 786 0.977941176 2.123851641 0.176470588 0.235849057 0.404411765 106 3 0 133 3L:11689309-11689393 6 Sug FBtr0344966|FBtr0300100 11689180|11689180 11690155|11690155 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 3L + 11689309 11689392 3'utr Sug FlyBase G22430.1 ACTCCCGAGCTGCATGTTGAATCGATGTACTACCTGTATTGTAATCTCGCTTTAATTAAGTAGTAACTTATCTCAGTAGCCCCA 75 11689334 0.982069065 7 75 554 1 2.086359831 0.180327869 0.426666667 0.647540984 75 0 0 122 3L:11689309-11689392 6 86 1960 FBgn0036191 390.82 14.43333333 22.11666667 0.220050151 5.958429561 3.888470234 5 5 5 0.1 dme-miR-1006-3p 6mer2-7 GAATTT 3L 11689496 11689501 + 3L_11689496_11689501_+ 0.999416158 0.989875852 0.994646005 0.006746011 Sug FBtr0344966|FBtr0300100 11689180|11689180 11690155|11690155 3L + 11689472 11689519 3'utr Sug FlyBase G29643.1 AATGTGAGAACTTAATTATTTGTAGAATTTCAAGCGCAGCTGGTTGTT 26 11689499 0.869460364 7 23 154 0.875 1.447158031 0.46875 0.192307692 0.34375 26 4 0 28 3L:11689472-11689519 6 Sug FBtr0344966|FBtr0300100 11689180|11689180 11690155|11690155 GAATTT 6mer2-7 dme-miR-1006-3p 3L + 11689482 11689522 3'utr Sug FlyBase G22431.1 CTTAATTATTTGTAGAATTTCAAGCGCAGCTGGTTGTTTGC 19 11689500 0.758971064 3 15 127 0.821428571 1.361727836 0.428571429 0.263157895 0.5 19 5 0 23 3L:11689482-11689522 6 21 1961 FBgn0036191 390.82 14.43333333 22.11666667 0.053733176 1.454965358 0.949510173 -3 -4 -3.5 0.1 dme-miR-308-3p 8mer-m1 CTGTGATT 3L 11689588 11689595 + 3L_11689588_11689595_+ 0.329003154 0.288225939 0.308614546 0.028833905 Sug FBtr0344966|FBtr0300100 11689180|11689180 11690155|11690155 3L + 11689562 11689617 3'utr Sug FlyBase G29644.1 AGTTTAAATAAGCCGCTGCCTTGGCGCTGTGATTGTTCAACTATTGTTTCTCCACA 92 11689595 0.82371723 10 92 722 1 2.033423755 0.157407407 0.141304348 0.268518519 92 0 0 108 3L:11689562-11689617 8 Sug FBtr0344966|FBtr0300100 11689180|11689180 11690155|11690155 CTGTGATT 8mer-m1 dme-miR-308-3p 3L + 11689565 11689607 3'utr Sug FlyBase G22432.1 TTAAATAAGCCGCTGCCTTGGCGCTGTGATTGTTCAACTATTG 61 11689595 0.691771813 7 59 470 0.961904762 1.703291378 0.152380952 0.475409836 0.695238095 61 3 1 101 3L:11689565-11689607 8 75.5 1962 FBgn0036191 390.82 14.43333333 22.11666667 0.193183563 5.230946882 3.413715147 -7 -7 -7 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 11689729 11689734 + 3L_11689729_11689734_+ 0.997387902 0.999999542 0.998693722 0.00184668 Sug FBtr0344966|FBtr0344966|FBtr0344966|FBtr0300100|FBtr0300100|FBtr0300100 11689180|11689180|11689180|11689180|11689180|11689180 11690155|11690155|11690155|11690155|11690155|11690155 3L + 11689720 11689755 3'utr Sug FlyBase G29646.1 TTTTTTTTTCTGTGAAATCTCTTAAGTGCTTACTTA 6 11689728 0.60911767 4 6 69 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3L:11689720-11689755 6 Sug FBtr0344966|FBtr0344966|FBtr0344966|FBtr0300100|FBtr0300100|FBtr0300100 11689180|11689180|11689180|11689180|11689180|11689180 11690155|11690155|11690155|11690155|11690155|11690155 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 11689722 11689749 3'utr Sug FlyBase G22433.1 TTTTTTTCTGTGAAATCTCTTAAGTGCT 5 11689742 0.645295107 3 5 43 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 3L:11689722-11689749 6 5 1963 FBgn0036191 390.82 14.43333333 22.11666667 0.012793613 0.346420323 0.226073851 1 -13 -6 0.1 dme-miR-11-3p 7mer-m1 TGTGATG 3L 11699900 11699906 - 3L_11699900_11699906_- 0.535593563 0.535039182 0.535316373 0.00039202 CG11658 FBtr0076126 11699494 11700696 3L - 11699890 11699924 3'utr CG11658 FlyBase G36216.1 GTAGCGTGGGGAAAATCATGTGATGTTGCAGGAAG 7 11699899 0.708582735 3 7 41 1 0.903089987 0.625 0.142857143 0.25 7 0 0 8 3L:11699890-11699924 7 CG11658 FBtr0076126 11699494 11700696 TGTGATG 7mer-m1 dme-miR-11-3p 3L - 11699881 11699924 3'utr CG11658 FlyBase G27373.1 GTAGCGTGGGGAAAATCATGTGATGTTGCAGGAAGCAAAGCTAG 6 11699899 0.957941575 3 6 31 1 0.77815125 1 0 0 6 0 0 6 3L:11699881-11699924 7 6.5 1964 FBgn0036196 52.87 2.63 4.06 0.122943068 2.47148289 1.600985222 -7 -7 -7 0.1 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 3L 11700022 11700029 - 3L_11700022_11700029_- 0.625363946 0.625363977 0.625363961 7.07E-08 CG11658 FBtr0076126 11699494 11700696 3L - 11700003 11700050 3'utr CG11658 FlyBase G36217.1 TTAACGTTTATCAGCTGCTTTTGGTGCTAAATCGTATTATAAGTTACA 128 11700030 0.753466129 5 124 1365 0.972413793 2.149219113 0.137931034 0.125 0.227586207 128 4 0 141 3L:11700003-11700050 8 CG11658 FBtr0076126 11699494 11700696 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 3L - 11700004 11700050 3'utr CG11658 FlyBase G27374.1 TTAACGTTTATCAGCTGCTTTTGGTGCTAAATCGTATTATAAGTTAC 74 11700030 0.735024211 8 71 748 0.972972973 2.033423755 0.126126126 0.364864865 0.576576577 74 3 0 108 3L:11700004-11700050 8 100.5 1965 FBgn0036196 52.87 2.63 4.06 1.900888973 38.21292776 24.75369458 1 1 1 0.1 dme-miR-8-3p 6mer2-7 AGTATT 3L 11700648 11700653 - 3L_11700648_11700653_- 0.999977791 0.999986667 0.999982229 6.29E-06 CG11658 FBtr0076127|FBtr0076126|FBtr0076124|FBtr0076128|FBtr0076125 11700089|11699494|11700089|11700089|11700089 11700696|11700696|11700696|11700696|11700696 3L - 11700607 11700690 3'utr CG11658 FlyBase G36220.1 TGTTCGGACCAAGGGAGAGAGATAGAGATAGATCGAAAGTATTTTTACGGCCCAGTGGATAGGTTGTTTATGCGTGTGTTAAAG 42 11700667 0.947913067 8 38 162 0.914893617 1.33243846 0.170212766 0.119047619 0.212765957 42 3 1 43 3L:11700607-11700690 6 CG11658 FBtr0076127|FBtr0076125|FBtr0076128|FBtr0076124|FBtr0076126 11700089|11700089|11700089|11700089|11699494 11700696|11700696|11700696|11700696|11700696 AGTATT 6mer2-7 dme-miR-8-3p 3L - 11700604 11700687 3'utr CG11658 FlyBase G27376.1 TCGGACCAAGGGAGAGAGATAGAGATAGATCGAAAGTATTTTTACGGCCCAGTGGATAGGTTGTTTATGCGTGTGTTAAAGTTT 18 11700668 0.971775366 6 15 91 0.851851852 0.884606581 0.222222222 0.388888889 0.592592593 18 2 2 23 3L:11700604-11700687 6 13.5 1966 FBgn0036196 52.87 2.63 4.06 0.255343295 5.133079848 3.325123153 14 15 14.5 0.1 dme-miR-14-3p 6mer3-8 AAGACT 3L 11710554 11710559 + 3L_11710554_11710559_+ 0.998987565 1 0.999493782 0.000715875 Ccdc56 FBtr0302271 11709346 11710570 3L + 11710517 11710565 3'utr Ccdc56 FlyBase G29657.2 AATATGGTAAAATGTATTTAATTAGTTGAGTAAACACAAGACTCTAAAA 25 11710529 0.951517488 6 23 196 0.928571429 1.414973348 0.25 0.12 0.214285714 25 2 0 26 3L:11710517-11710565 6 Ccdc56 FBtr0302271 11709346 11710570 AAGACT 6mer3-8 dme-miR-14-3p 3L + 11710521 11710567 3'utr Ccdc56 FlyBase G22437.1 TGGTAAAATGTATTTAATTAGTTGAGTAAACACAAGACTCTAAAAGC 15 11710561 0.771619591 6 12 79 0.894736842 1.230448921 0.263157895 0.2 0.368421053 15 2 0 17 3L:11710521-11710567 6 9.5 1967 FBgn0261353 446.3333333 35.80333333 54.86333333 0.021284541 0.265338423 0.173157543 25 -7 9 0.1 dme-miR-932-5p 7mer-m8 GGAATTG 3L 11722891 11722897 + 3L_11722891_11722897_+ 0.564039335 0.702786593 0.633412964 0.098109157 Bmcp FBtr0076115|FBtr0076114 11722809|11722809 11728118|11723325 3L + 11722848 11722901 3'utr Bmcp FlyBase G29664.2 GACATATTTTAGCATTCAAACCAAAAAGATCAGATCTGCTGCCGGAATTGGCTT 16 11722887 0.968543687 6 12 65 0.777777778 1.146128036 0.111111111 0.125 0.222222222 16 4 0 14 3L:11722848-11722901 7 Bmcp FBtr0076115|FBtr0076114 11722809|11722809 11728118|11723325 GGAATTG 7mer-m8 dme-miR-932-5p 3L + 11722858 11722901 3'utr Bmcp FlyBase G22443.1 AGCATTCAAACCAAAAAGATCAGATCTGCTGCCGGAATTGGCTT 16 11722886 0.792444751 4 14 62 0.904761905 0.977723605 0.571428571 0.25 0.428571429 16 1 1 19 3L:11722858-11722901 7 9 1968 FBgn0036199 260.3566667 19.57666667 30.33666667 0.034567964 0.459730972 0.296670696 4 5 4.5 0.1 dme-miR-2a-2-5p 8mer-m1 TGATGAGG 3L 11732005 11732012 + 3L_11732005_11732012_+ 0.537864125 0.601572452 0.569718288 0.045048642 CG32088 FBtr0332764 11731940 11732048 3L + 11731956 11732029 3'utr CG32088 FlyBase G29673.1 ATATTCTCATAGACAAAAGCTCTGCATACTATAAATATAGTAAATTGAATGATGAGGCTCAACATATGTCTAAT 57 11732008 0.85941128 8 53 307 0.944444444 1.355387658 0 0.192982456 0.361111111 57 2 2 68 3L:11731956-11732029 8 CG32088 FBtr0332764 11731940 11732048 TGATGAGG 8mer-m1 dme-miR-2a-2-5p 3L + 11731989 11732024 3'utr CG32088 FlyBase G22450.1 AATATAGTAAATTGAATGATGAGGCTCAACATATGT 34 11732008 0.822156221 4 33 161 1 1.73239376 0 0.411764706 0.62962963 34 0 0 54 3L:11731989-11732024 8 41 1969 FBgn0052088 164.3333333 6.503333333 9.94 0.249492901 6.304459252 4.124748491 -3 -3 -3 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3L 11786160 11786166 - 3L_11786160_11786166_- 0.521223853 0.521223812 0.521223833 7.07E-08 Pi3K68D FBtr0076086|FBtr0332055 11786050|11786050 11786625|11786625 3L - 11786146 11786192 5'utr Pi3K68D FlyBase G36244.1 AACCATGTATTACGAAATGAACAAATTGTGATTTGCTGCTACATATA 60 11786166 0.982590998 4 59 452 0.987341772 1.591064607 0.215189873 0.216666667 0.405063291 60 0 1 78 3L:11786146-11786192 7 Pi3K68D FBtr0332055|FBtr0076086 11786050|11786050 11786625|11786625 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 11786151 11786181 5'utr Pi3K68D FlyBase G27394.1 ACGAAATGAACAAATTGTGATTTGCTGCTAC 35 11786160 0.573528481 5 35 263 1 1.785329835 0.245901639 0.457142857 0.68852459 35 0 0 61 3L:11786151-11786181 7 47.5 1970 FBgn0015278 1326.206667 35.56 54.69 0.035816439 1.335770529 0.868531724 0 -6 -3 0.1 dme-miR-995-5p 6mer3-8 AATTCG 3L 11786391 11786396 - 3L_11786391_11786396_- 0.999989555 0.999999309 0.999994432 6.86E-06 Pi3K68D FBtr0076086|FBtr0332055 11786050|11786050 11786625|11786625 3L - 11786368 11786413 5'utr Pi3K68D FlyBase G36245.1 ATGTGCCCTCATATCGAAATTCGTGCCTTCCGCTATTGCCGGAATA 11 11786386 0.975210035 4 10 79 0.923076923 1.079181246 0 0.181818182 0.307692308 11 1 0 12 3L:11786368-11786413 6 Pi3K68D FBtr0332055|FBtr0076086 11786050|11786050 11786625|11786625 AATTCG 6mer3-8 dme-miR-995-5p 3L - 11786367 11786414 5'utr Pi3K68D FlyBase G27395.1 TATGTGCCCTCATATCGAAATTCGTGCCTTCCGCTATTGCCGGAATAA 5 11786386 0.975444574 2 5 38 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 3L:11786367-11786414 6 8 1971 FBgn0015278 1326.206667 35.56 54.69 0.006032242 0.224971879 0.146279027 -10 -10 -10 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3L 11817023 11817029 - 3L_11817023_11817029_- 0.441598188 0.421764925 0.431681557 0.014024261 CG5946 FBtr0302136|FBtr0076078|FBtr0076079|FBtr0301135 11816981|11816693|11816981|11816981 11817143|11817143|11817143|11818073 3L - 11817008 11817046 3'utr CG5946 FlyBase G36255.1 CGCCAAGATTTCGGCAATGTGATTGAAAACCAAGCGAAT 33 11817023 0.855001821 5 33 173 1 1.653212514 0.088888889 0.303030303 0.488888889 33 0 0 45 3L:11817008-11817046 7 CG5946 FBtr0302136|FBtr0301135|FBtr0076078|FBtr0076079 11816981|11816981|11816693|11816981 11817143|11818073|11817143|11817143 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 11817007 11817042 3'utr CG5946 FlyBase G27398.1 AAGATTTCGGCAATGTGATTGAAAACCAAGCGAATA 15 11817023 0.955892702 2 15 70 1 1.342422681 0.136363636 0.466666667 0.636363636 15 0 0 22 3L:11817007-11817042 7 24 1972 FBgn0036211 623.3566667 60.22666667 92.04666667 0.038501233 0.398494576 0.260737307 -6 -6 -6 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 3L 11817112 11817118 - 3L_11817112_11817118_- 0.620153368 0.620147457 0.620150413 4.17E-06 CG5946 FBtr0302136|FBtr0076078|FBtr0076079|FBtr0301135 11816981|11816693|11816981|11816981 11817143|11817143|11817143|11818073 3L - 11817099 11817141 3'utr CG5946 FlyBase G36256.1 TGATGGACATTATGGGACGAAATTGCATTTTCGTTGTGTTATA 9 11817119 0.893800346 2 9 84 1 0.954242509 0.333333333 0 0 9 0 0 9 3L:11817099-11817141 7 CG5946 FBtr0302136|FBtr0301135|FBtr0076078|FBtr0076079 11816981|11816981|11816693|11816981 11817143|11818073|11817143|11817143 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 11817082 11817131 3'utr CG5946 FlyBase G27399.1 TATGGGACGAAATTGCATTTTCGTTGTGTTATATTCCTCTTTTTTTATCT 6 11817119 0.991119524 2 5 61 0.7 0.84509804 0 0.5 0.7 6 3 0 7 3L:11817082-11817131 7 7 1973 FBgn0036211 623.3566667 60.22666667 92.04666667 0.011229526 0.116227585 0.076048381 1 1 1 0.1 dme-miR-282-5p 6mer2-7 GAGGCT 3L 11823758 11823763 + 3L_11823758_11823763_+ 0.96496202 0.999492404 0.982227212 0.02441668 RpL10Ab FBtr0345073 11823367 11824211 3L + 11823660 11823778 3'utr RpL10Ab FlyBase G29681.1 TGAAGCACATTCCTCGTCCCAAGATGAAGGTGTGCATCCTTGGCGATCAGCAGCATTGCGACGAAGCCAAGGCCAACAACGTCGACTTCATGGATGCCGAGGCTCTGAAGAAGCTGAAC 11 11823765 0.920148591 8 11 43 1 1.176091259 0.4 0.272727273 0.466666667 11 0 0 15 3L:11823660-11823778 6 RpL10Ab FBtr0345073 11823367 11824211 GAGGCT 6mer2-7 dme-miR-282-5p 3L + 11823736 11823820 3'utr RpL10Ab FlyBase G22458.1 CAACGTCGACTTCATGGATGCCGAGGCTCTGAAGAAGCTGAACAAGAACAAGAAGCTGGTGAAGAAGCTGGCCAAGTCCTATGAT 14 11823753 0.948949484 10 13 54 0.958333333 1.06069784 0.458333333 0.428571429 0.666666667 14 0 1 23 3L:11823736-11823820 6 6.5 1974 FBgn0036213 2531.526667 421.71 637.3866667 0.002567621 0.015413436 0.010197891 -7 5 -1 0.1 dme-miR-276a-3p 6mer3-8 AGTTCC 3L 11823894 11823899 + 3L_11823894_11823899_+ 0.999718025 0.999927962 0.999822993 0.000148492 RpL10Ab FBtr0345073 11823367 11824211 3L + 11823859 11824035 3'utr RpL10Ab FlyBase G29682.2 TCGTTTGCTTGGCCCTGGCTTGAACAAGGCCGGCAAGTTCCCTGCCCTGCTGTCGCATCAGGAGTCTATGATTGGCAAGATCGAGGAGGTTAAGTCGACCATCAAGTTCCAGATGAAGAAGGTGCTCTGCCTGTCCGTCGCCGTCGGCCACGTTGGCATGAAGTCCGACGAGCTGGC 36 11823896 0.965619748 17 35 166 0.977272727 1.633468456 0.363636364 0.166666667 0.318181818 36 1 0 43 3L:11823859-11824035 6 RpL10Ab FBtr0345073 11823367 11824211 AGTTCC 6mer3-8 dme-miR-276a-3p 3L + 11823827 11823937 3'utr RpL10Ab FlyBase G22459.1 CTGGCCTCTGAGTCGCTGATCAAGCAGATTCCTCGTTTGCTTGGCCCTGGCTTGAACAAGGCCGGCAAGTTCCCTGCCCTGCTGTCGCATCAGGAGTCTATGATTGGCAAG 18 11823896 0.9707545 10 17 97 0.96 1.380211242 0.44 0.388888889 0.56 18 1 0 24 3L:11823827-11823937 6 9.5 1975 FBgn0036213 2531.526667 421.71 637.3866667 0.003752676 0.022527329 0.01490461 -2 -2 -2 0.1 dme-miR-965-3p 8mer-A1 TACGCTTA 3L 11826959 11826966 - 3L_11826959_11826966_- 0.625135865 0.625181259 0.625158562 3.21E-05 CycA FBtr0304650 11826717 11827651 3L - 11826842 11827051 3'utr CycA FlyBase G36271.1 TAAAAAACTCACACTGATCGTGCTCAGAACGGCAGGCAGCCGTGGAATGTTGCTAAACTCTTGTTCTTGTAATCTTGTAATCTTATACGCTTACTAAATGTTTACTAAACTTAGTCTAGACCATCTTGCGACCACATATGTAGCTAGAATAGAGCGCTGCCGAAATGCGTACAGCCAGATGATGGGTCTTACTTTACACTTAGGTTTATG 90 11826967 0.953024251 28 82 708 0.91509434 1.384711743 0.150943396 0.166666667 0.29245283 90 6 3 97 3L:11826842-11827051 8 CycA FBtr0304650 11826717 11827651 TACGCTTA 8mer-A1 dme-miR-965-3p 3L - 11826893 11827009 3'utr CycA FlyBase G27411.1 TGGAATGTTGCTAAACTCTTGTTCTTGTAATCTTGTAATCTTATACGCTTACTAAATGTTTACTAAACTTAGTCTAGACCATCTTGCGACCACATATGTAGCTAGAATAGAGCGCTG 55 11826967 0.849991589 14 47 549 0.845238095 1.374137094 0.154761905 0.436363636 0.630952381 55 11 2 71 3L:11826893-11827009 8 43 1976 FBgn0000404 2869.163333 125.9133333 194.37 0.014986947 0.341504739 0.221227556 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 11827114 11827119 - 3L_11827114_11827119_- 1 0.999999985 0.999999993 0 CycA FBtr0076075|FBtr0076075|FBtr0076075|FBtr0304650|FBtr0304650|FBtr0304650 11827081|11827081|11827081|11826717|11826717|11826717 11827651|11827651|11827651|11827651|11827651|11827651 3L - 11827097 11827140 3'utr CycA FlyBase G36272.1 ACTATTTACTCCGTAAATGTTCTGTGAACTCCAAAACAAATATA 26 11827120 0.973508664 6 24 185 0.944444444 1.230448921 0 0.230769231 0.444444444 26 1 1 34 3L:11827097-11827140 6 CycA FBtr0076075|FBtr0076075|FBtr0076075|FBtr0304650|FBtr0304650|FBtr0304650 11827081|11827081|11827081|11826717|11826717|11826717 11827651|11827651|11827651|11827651|11827651|11827651 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 11827099 11827140 3'utr CycA FlyBase G27413.1 ACTATTTACTCCGTAAATGTTCTGTGAACTCCAAAACAAATA 27 11827120 0.804497104 7 26 192 0.951219512 1.591064607 0.048780488 0.37037037 0.585365854 27 2 0 39 3L:11827099-11827140 6 25.5 1977 FBgn0000404 2869.163333 125.9133333 194.37 0.008887608 0.202520252 0.131193085 1 1 1 0.1 dme-miR-79-3p 7mer-A1 AGCTTTA 3L 11993631 11993637 - 3L_11993631_11993637_- 0.823278798 0.822137378 0.822708088 0.000807092 Grip163 FBtr0076061 11993272 11993752 3L - 11993623 11993685 3'utr Grip163 FlyBase G36299.1 TATGCATGCATGGCGTCTCCTAAATGTAAAGCTTCGGTGAAGAAAATCAGCTTTAAAGGCATT 19 11993639 0.951815006 5 18 106 0.954545455 1.021189299 0.045454545 0.105263158 0.227272727 19 0 1 21 3L:11993623-11993685 7 Grip163 FBtr0076061 11993272 11993752 AGCTTTA 7mer-A1 dme-miR-79-3p 3L - 11993616 11993685 3'utr Grip163 FlyBase G27430.1 TATGCATGCATGGCGTCTCCTAAATGTAAAGCTTCGGTGAAGAAAATCAGCTTTAAAGGCATTTATTTCT 16 11993639 0.967071286 4 15 86 0.947368421 1.255272505 0.210526316 0.125 0.263157895 16 1 0 18 3L:11993616-11993685 7 13 1978 FBgn0026432 421 10.95666667 16.75333333 0.03087886 1.186492242 0.775964982 2 2 2 0.1 dme-miR-263a-5p 7mer-m1 TGCCATT 3L 11993717 11993723 - 3L_11993717_11993723_- 0.45205154 0.447471591 0.449761565 0.003238478 Grip163 FBtr0076061 11993272 11993752 3L - 11993699 11993875 stop_codon Grip163 FlyBase G36300.1 AAGGCGGCCGCTTCTGGTTACCAGGAGGAAATCGGTGACCTGATTTGTATTATTAACTTTAACCACTATTACAAGGTATCTGGGAACCATACTGGTTCCTCAATGGAGGACAAAAAGTGCTAGCCAATAATTGTTAGATAGGGAATTTATCTTGCCATTAAGCTGAGCTTAGAACAT 70 11993718 0.949236192 14 68 606 0.976190476 1.913813852 0.154761905 0.171428571 0.30952381 70 2 0 82 3L:11993699-11993875 7 Grip163 FBtr0076061 11993272 11993752 TGCCATT 7mer-m1 dme-miR-263a-5p 3L - 11993701 11993853 stop_codon Grip163 FlyBase G27431.1 AGGAGGAAATCGGTGACCTGATTTGTATTATTAACTTTAACCACTATTACAAGGTATCTGGGAACCATACTGGTTCCTCAATGGAGGACAAAAAGTGCTAGCCAATAATTGTTAGATAGGGAATTTATCTTGCCATTAAGCTGAGCTTAGAAC 43 11993718 0.895317004 12 42 352 0.958333333 1.236789099 0.097222222 0.441860465 0.666666667 43 0 3 69 3L:11993701-11993853 7 22 1979 FBgn0026432 421 10.95666667 16.75333333 0.052256532 2.007909948 1.313171508 -5 -5 -5 0.1 dme-miR-305-5p 6mer2-7 GTACAA 3L 12121859 12121864 - 3L_12121859_12121864_- 0.99991252 0.999898328 0.999905424 1.00E-05 yps FBtr0305992|FBtr0076027 12121272|12121678 12122663|12122106 3L - 12121827 12121890 3'utr yps FlyBase G36314.1 TAGTTTCGTAGGGCAGAGAATCAATTGTACAACTCATACCACAACAAAACTAACATCCTCAAAA 31 12121866 0.964967945 3 31 162 1 1.556302501 0.361111111 0.161290323 0.277777778 31 0 0 36 3L:12121827-12121890 6 yps FBtr0305992|FBtr0076027 12121272|12121678 12122663|12122106 GTACAA 6mer2-7 dme-miR-305-5p 3L - 12121846 12121884 3'utr yps FlyBase G27441.1 CGTAGGGCAGAGAATCAATTGTACAACTCATACCACAAC 11 12121866 0.867847302 2 9 45 0.941176471 1.204119983 0.411764706 0.363636364 0.588235294 11 1 0 16 3L:12121846-12121884 6 19.5 1980 FBgn0022959 5324.54 265.4 408.5666667 0.003662288 0.073474002 0.047727829 2 2 2 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 3L 12143112 12143119 + 3L_12143112_12143119_+ 0.643565681 0.643565672 0.643565677 0 RhoGAP68F FBtr0334092|FBtr0334091|FBtr0075997|FBtr0334093 12142827|12142827|12142827|12142827 12143380|12143380|12143380|12143380 3L + 12143062 12143135 3'utr RhoGAP68F FlyBase G29720.1 CCGAAAATCACAATTATTTACCCCCAACAAGCGCTTAATACGATTGATTTACCAAAGAAATTTGCTCGTGTTCG 31 12143111 0.974028894 8 30 186 0.974358974 1.278753601 0.128205128 0.225806452 0.384615385 31 0 1 38 3L:12143062-12143135 8 RhoGAP68F FBtr0334093|FBtr0075997|FBtr0334091|FBtr0334092 12142827|12142827|12142827|12142827 12143380|12143380|12143380|12143380 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 12143083 12143131 3'utr RhoGAP68F FlyBase G22497.1 CCCCAACAAGCGCTTAATACGATTGATTTACCAAAGAAATTTGCTCGTG 22 12143111 0.979592546 4 20 133 0.903225806 1.146128036 0.258064516 0.272727273 0.483870968 22 2 1 28 3L:12143083-12143131 8 23.5 1981 FBgn0036257 644.8233333 34.92 53.27666667 0.036444091 0.672966781 0.441093662 1 1 1 0.1 dme-miR-283-5p 6mer3-8 TGATAT 3L 12143161 12143166 + 3L_12143161_12143166_+ 0.635893424 0.999179532 0.817536478 0.256882065 RhoGAP68F FBtr0334092|FBtr0334091|FBtr0075997|FBtr0334093 12142827|12142827|12142827|12142827 12143380|12143380|12143380|12143380 3L + 12143137 12143186 3'utr RhoGAP68F FlyBase G29721.1 TATGCGACGAACAGGAGAGAAATTTGATATGAGATGTTATTATTATATAC 13 12143162 0.828116581 6 12 92 0.866666667 1.113943352 0.2 0.153846154 0.266666667 13 2 0 13 3L:12143137-12143186 6 RhoGAP68F FBtr0334093|FBtr0075997|FBtr0334091|FBtr0334092 12142827|12142827|12142827|12142827 12143380|12143380|12143380|12143380 TGATAT 6mer3-8 dme-miR-283-5p 3L + 12143140 12143172 3'utr RhoGAP68F FlyBase G22498.1 GCGACGAACAGGAGAGAAATTTGATATGAGATG 8 12143161 0.934356752 2 7 28 1 1 0.5 0.25 0.4 8 0 0 10 3L:12143140-12143172 6 10 1982 FBgn0036257 644.8233333 34.92 53.27666667 0.015508124 0.286368843 0.187699431 -1 0 -0.5 0.1 dme-miR-1006-3p 6mer2-7 GAATTT 3L 12143308 12143313 + 3L_12143308_12143313_+ 1 1 1 0 RhoGAP68F FBtr0334092|FBtr0334091|FBtr0075997|FBtr0334093 12142827|12142827|12142827|12142827 12143380|12143380|12143380|12143380 3L + 12143266 12143329 3'utr RhoGAP68F FlyBase G29723.1 AGTGGAGTTGTGGCGAACTCAAAAATCGTACTGTGTAGTCTTGAATTTCCTTATAGTCATACAA 14 12143311 0.993605789 7 10 119 0.764705882 1.113943352 0.176470588 0.142857143 0.294117647 14 4 0 13 3L:12143266-12143329 6 RhoGAP68F FBtr0334093|FBtr0075997|FBtr0334091|FBtr0334092 12142827|12142827|12142827|12142827 12143380|12143380|12143380|12143380 GAATTT 6mer2-7 dme-miR-1006-3p 3L + 12143287 12143331 3'utr RhoGAP68F FlyBase G22500.1 AAAATCGTACTGTGTAGTCTTGAATTTCCTTATAGTCATACAAAC 7 12143316 0.652171008 5 6 64 0.888888889 0.903089987 0 0.285714286 0.444444444 7 1 0 8 3L:12143287-12143331 6 8 1983 FBgn0036257 644.8233333 34.92 53.27666667 0.012406499 0.229095074 0.150159545 -3 -8 -5.5 0.1 dme-miR-34-5p 8mer-A1 CACTGCCA 3L 12156412 12156419 + 3L_12156412_12156419_+ 0.67840797 0.678407923 0.678407946 7.07E-08 Nrx-IV FBtr0075999|FBtr0075998 12156240|12156240 12156990|12156990 3L + 12156394 12156468 3'utr Nrx-IV FlyBase G29736.1 AGAAAATACTTTTCCATGCACTGCCAATTGTTTTGCGCAAGTAAATGCTAAGATTTGATTTATAATTGGTTGGCT 20 12156410 0.985961967 6 20 165 1 1.397940009 0.32 0.25 0.4 20 0 0 25 3L:12156394-12156468 8 Nrx-IV FBtr0075999|FBtr0075998 12156240|12156240 12156990|12156990 CACTGCCA 8mer-A1 dme-miR-34-5p 3L + 12156339 12156426 3'utr Nrx-IV FlyBase G22508.1 GAGAACGAAGTGAAAATCAAATAGACACGGAAAAGGCTCACCACGCATAACAGACAGAAAATACTTTTCCATGCACTGCCAATTGTTT 18 12156410 0.979549987 4 18 123 1 1.447158031 0.357142857 0.333333333 0.571428571 18 0 0 28 3L:12156339-12156426 8 16.5 1984 FBgn0013997 1120.423333 27.23333333 41.64333333 0.014726577 0.605875153 0.396221884 2 2 2 0.1 dme-miR-184-3p 7mer-A1 CCGTCCA 3L 12156548 12156554 + 3L_12156548_12156554_+ 0.823347576 0.823348049 0.823347812 2.83E-07 Nrx-IV FBtr0075999|FBtr0075998 12156240|12156240 12156990|12156990 3L + 12156491 12156571 3'utr Nrx-IV FlyBase G29737.1 TTTTTAGTCTTTGGTTCTGTCTGACGGCATTATTGAAATTTCTTCTATCACAGAATACCGTCCATTTTTAGTTAATTTTAT 469 12156546 0.960489492 18 449 4593 0.956603774 1.625826713 0.020754717 0.1108742 0.213207547 469 12 11 507 3L:12156491-12156571 7 Nrx-IV FBtr0075999|FBtr0075998 12156240|12156240 12156990|12156990 CCGTCCA 7mer-A1 dme-miR-184-3p 3L + 12156496 12156571 3'utr Nrx-IV FlyBase G22509.1 AGTCTTTGGTTCTGTCTGACGGCATTATTGAAATTTCTTCTATCACAGAATACCGTCCATTTTTAGTTAATTTTAT 187 12156546 0.951413117 15 173 1622 0.91634981 1.302835797 0.02661597 0.320855615 0.517110266 187 11 11 241 3L:12156496-12156571 7 316.5 1985 FBgn0013997 1120.423333 27.23333333 41.64333333 0.282482514 11.62178703 7.600256143 2 2 2 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 3L 12156856 12156861 + 3L_12156856_12156861_+ 0.999998729 0.999993816 0.999996273 3.46E-06 Nrx-IV FBtr0075999|FBtr0075998 12156240|12156240 12156990|12156990 3L + 12156824 12156884 3'utr Nrx-IV FlyBase G29739.1 ATTGTATTTTTGGAAAATGCATTTTGAACGTCTTGACTTGAAATTTTCAAATATACATTAG 17 12156856 0.832425744 7 17 137 1 1.342422681 0.090909091 0.235294118 0.409090909 17 0 0 22 3L:12156824-12156884 6 Nrx-IV FBtr0075999|FBtr0075998 12156240|12156240 12156990|12156990 TTGACT 6mer3-8 dme-miR-1012-3p 3L + 12156844 12156876 3'utr Nrx-IV FlyBase G22511.1 ATTTTGAACGTCTTGACTTGAAATTTTCAAATA 17 12156856 0.767644613 2 16 129 0.961538462 1.096910013 0 0.352941176 0.576923077 17 0 1 25 3L:12156844-12156876 6 15.5 1986 FBgn0013997 1120.423333 27.23333333 41.64333333 0.013834057 0.569155447 0.372208437 0 0 0 0.1 dme-miR-8-3p 7mer-m8 CAGTATT 3L 12269248 12269254 + 3L_12269248_12269254_+ 0.661615243 0.661615243 0.661615243 0 CG32100 FBtr0076006 12269199 12269803 3L + 12269231 12269286 3'utr CG32100 FlyBase G29741.1 TATATCGTTAGTGCACTCAGTATTTTCTGTTTGTTATGATTAGCTATAGATTCCTT 11 12269247 0.89090119 6 11 138 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 3L:12269231-12269286 7 CG32100 FBtr0076006 12269199 12269803 CAGTATT 7mer-m8 dme-miR-8-3p 3L + 12269231 12269276 3'utr CG32100 FlyBase G22512.1 TATATCGTTAGTGCACTCAGTATTTTCTGTTTGTTATGATTAGCTA 8 12269255 0.991115255 5 8 88 1 1.113943352 0 0.5 0.692307692 8 0 0 13 3L:12269231-12269276 7 8.5 1987 FBgn0052100 96.87 5.46 8.436666667 0.087746464 1.556776557 1.007506914 1 -7 -3 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3L 12269620 12269626 + 3L_12269620_12269626_+ 0.516245763 0.521223854 0.518734809 0.003520048 CG32100 FBtr0076006 12269199 12269803 3L + 12269578 12269705 3'utr CG32100 FlyBase G29742.1 AGAGCCGGATCCAATTGTTTATGTACTTAATGCATTTGATTTTGTGATTTTAATCTTTTCGTAAGACTCGAAACTGGTACCAATTTAGCAAGTAAGCTCCAGCCAGTGTTCAATGCTCACCGTAGCCC 16 12269599 0.99013347 9 16 160 1 1.342422681 0.090909091 0.25 0.454545455 16 0 0 22 3L:12269578-12269705 7 CG32100 FBtr0076006 12269199 12269803 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 12269590 12269629 3'utr CG32100 FlyBase G22513.1 AATTGTTTATGTACTTAATGCATTTGATTTTGTGATTTTA 5 12269627 0.993685563 3 4 47 0.692307692 0.954242509 0.307692308 0.6 0.846153846 5 4 0 9 3L:12269590-12269629 7 5 1988 FBgn0052100 96.87 5.46 8.436666667 0.051615567 0.915750916 0.592651126 21 -7 7 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 3L 12270036 12270041 - 3L_12270036_12270041_- 0.907444164 0.825688502 0.866566333 0.05781001 Pbgs FBtr0076011|FBtr0076011|FBtr0333357|FBtr0333357 12269966|12269966|12269450|12269450 12270291|12270291|12270291|12270291 3L - 12270031 12270082 3'utr Pbgs FlyBase G36359.1 ATTTTACCGATTAAGTGGCTTAAATAAGACTCAAAGGCTTTTACTTACATCA 59 12270042 0.802408982 8 55 364 0.943661972 1.348953548 0.056338028 0.203389831 0.338028169 59 2 2 67 3L:12270031-12270082 6 Pbgs FBtr0076011|FBtr0076011|FBtr0333357|FBtr0333357 12269966|12269966|12269450|12269450 12270291|12270291|12270291|12270291 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 3L - 12270029 12270082 3'utr Pbgs FlyBase G27466.1 ATTTTACCGATTAAGTGGCTTAAATAAGACTCAAAGGCTTTTACTTACATCAAT 28 12270042 0.971497265 7 27 162 0.971428571 1.230448921 0.171428571 0.142857143 0.314285714 28 0 1 34 3L:12270029-12270082 6 23.5 1989 FBgn0036271 224.0566667 17.76333333 27 0.104884181 1.322949897 0.87037037 1 1 1 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 3L 12272080 12272085 - 3L_12272080_12272085_- 0.944664514 0.979176129 0.961920321 0.024403386 CG4300 FBtr0076010|FBtr0076010|FBtr0076009|FBtr0076009|FBtr0346393|FBtr0346393|FBtr0346392|FBtr0346392 12271654|12271654|12271654|12271654|12271654|12271654|12271654|12271654 12272457|12272457|12272457|12272457|12272184|12272184|12272184|12272184 3L - 12271953 12272115 3'utr CG4300 FlyBase G36365.1 CAGAGGAAAACACGCACTTCCAATGGCTGTTACTTACAATTGAAAACCAAACCAAATACTGAACCCAATTCGTTTACGCTTAAGTTAGGCTTTAGTTCCGTTTCTCGTTCACTGATTTCAATGCTAAAAACTAAGACAAAAGTACAACCTTTAAGCAAGGACA 316 12272092 0.981231643 22 311 2244 0.984654731 2.284430734 0.079283887 0.196202532 0.350383632 316 5 1 385 3L:12271953-12272115 6 CG4300 FBtr0346393|FBtr0346393|FBtr0346392|FBtr0346392|FBtr0076010|FBtr0076010|FBtr0076009|FBtr0076009 12271654|12271654|12271654|12271654|12271654|12271654|12271654|12271654 12272184|12272184|12272184|12272184|12272457|12272457|12272457|12272457 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 3L - 12272018 12272118 3'utr CG4300 FlyBase G27472.2 AGACAGAGGAAAACACGCACTTCCAATGGCTGTTACTTACAATTGAAAACCAAACCAAATACTGAACCCAATTCGTTTACGCTTAAGTTAGGCTTTAGTTC 233 12272092 0.982641411 12 223 1643 0.966759003 2.065704172 0.113573407 0.407725322 0.617728532 233 10 2 349 3L:12272018-12272118 6 233.5 1990 FBgn0036272 597.6666667 37.11333333 57.19666667 0.390686001 6.291539429 4.082405735 7 7 7 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3L 12281123 12281129 + 3L_12281123_12281129_+ 0.823347238 0.823160722 0.82325398 0.000131875 CG10426 FBtr0076007|FBtr0333356 12281032|12281032 12281476|12281476 3L + 12281086 12281153 3'utr CG10426 FlyBase G29745.1 TGAAATCTATTTAGTCATTTACTCGAATCTCAAAGTGCTAGTCAAAGCTTTCCTACGGTTGTGCGACG 30 12281103 0.896095075 9 24 219 0.777777778 0.970036777 0.305555556 0.2 0.333333333 30 6 2 28 3L:12281086-12281153 7 CG10426 FBtr0333356|FBtr0076007 12281032|12281032 12281476|12281476 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L + 12281085 12281156 3'utr CG10426 FlyBase G22514.1 TTGAAATCTATTTAGTCATTTACTCGAATCTCAAAGTGCTAGTCAAAGCTTTCCTACGGTTGTGCGACGCCT 24 12281121 0.960811269 12 22 166 0.971428571 1.230448921 0.085714286 0.333333333 0.542857143 24 0 1 34 3L:12281085-12281156 7 18 1991 FBgn0036273 103.6666667 4.046666667 6.22 0.173633441 4.448105437 2.893890675 20 2 11 0.1 dme-miR-304-5p 8mer-A1 TGAGATTA 3L 12281298 12281305 + 3L_12281298_12281305_+ 0.623619747 0.541938439 0.582779093 0.057757401 CG10426 FBtr0076007|FBtr0333356 12281032|12281032 12281476|12281476 3L + 12281222 12281377 3'utr CG10426 FlyBase G29746.1 TACTTACCCTGCAATGCTGCGGTAGATCTTAGGCGCTGCCTTTCGCCTCGAGGCCTTAGTCGTAATACGTTCCTTATGAGATTATCTAATACATACTCGTGCAACAATTCTGTACCTCTACTCTGAAGCACAAGCTTAGTTCGTAGATAAACTAAA 70 12281298 0.865425051 18 69 510 0.977272727 1.934498451 0.113636364 0.214285714 0.375 70 2 0 86 3L:12281222-12281377 8 CG10426 FBtr0333356|FBtr0076007 12281032|12281032 12281476|12281476 TGAGATTA 8mer-A1 dme-miR-304-5p 3L + 12281227 12281310 3'utr CG10426 FlyBase G22515.1 ACCCTGCAATGCTGCGGTAGATCTTAGGCGCTGCCTTTCGCCTCGAGGCCTTAGTCGTAATACGTTCCTTATGAGATTATCTAA 22 12281297 0.988781921 11 20 183 0.935483871 1.462397998 0.129032258 0.318181818 0.516129032 22 2 0 29 3L:12281227-12281310 8 16.5 1992 FBgn0036273 103.6666667 4.046666667 6.22 0.159163987 4.077429984 2.652733119 0 1 0.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 12281333 12281338 + 3L_12281333_12281338_+ 0.999999389 0.999999645 0.999999517 1.41E-07 CG10426 FBtr0076007|FBtr0333356 12281032|12281032 12281476|12281476 3L + 12281222 12281377 3'utr CG10426 FlyBase G29746.1 TACTTACCCTGCAATGCTGCGGTAGATCTTAGGCGCTGCCTTTCGCCTCGAGGCCTTAGTCGTAATACGTTCCTTATGAGATTATCTAATACATACTCGTGCAACAATTCTGTACCTCTACTCTGAAGCACAAGCTTAGTTCGTAGATAAACTAAA 70 12281332 0.865425051 18 69 510 0.977272727 1.934498451 0.113636364 0.214285714 0.375 70 2 0 86 3L:12281222-12281377 6 CG10426 FBtr0333356|FBtr0076007 12281032|12281032 12281476|12281476 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 12281314 12281359 3'utr CG10426 FlyBase G22516.1 ATACTCGTGCAACAATTCTGTACCTCTACTCTGAAGCACAAGCTTA 21 12281332 0.97958391 5 20 141 0.933333333 0.970036777 0 0.333333333 0.533333333 21 0 2 28 3L:12281314-12281359 6 28.5 1993 FBgn0036273 103.6666667 4.046666667 6.22 0.274919614 7.042833608 4.581993569 1 1 1 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 3L 12402673 12402678 - 3L_12402673_12402678_- 0.785842326 0.826970076 0.806406201 0.029081746 CG32103 FBtr0332090 12402293 12404054 3L - 12402656 12402691 3'utr CG32103 FlyBase G36373.1 ACACTTGAATCATTTGACTTGATCATTAAAAATCAC 13 12402678 0.971147033 5 13 102 1 1.255272505 0 0.230769231 0.444444444 13 0 0 18 3L:12402656-12402691 6 CG32103 FBtr0332090 12402293 12404054 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 12402653 12402689 3'utr CG32103 FlyBase G27476.1 ACTTGAATCATTTGACTTGATCATTAAAAATCACCCA 12 12402678 0.978657028 4 11 97 0.947368421 1.255272505 0.052631579 0.5 0.684210526 12 1 0 18 3L:12402653-12402689 6 12.5 1994 FBgn0052103 1942.393333 66.43 101.62 0.00643536 0.188167996 0.123007282 0 0 0 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 12402929 12402934 - 3L_12402929_12402934_- 0.999952673 0.99999329 0.999972982 2.87E-05 CG32103 FBtr0332090 12402293 12404054 3L - 12402897 12402978 3'utr CG32103 FlyBase G36375.1 AACCAACACAATACCCATACACCATGTAATTTATTTGATATATCATGTGAATCTGAAGCCGATCGCAAAACCGACCAATCAT 48 12402931 0.999981988 12 42 286 0.883333333 1.122215878 0.166666667 0.208333333 0.366666667 48 4 3 53 3L:12402897-12402978 6 CG32103 FBtr0332090 12402293 12404054 ATGTGA 6mer3-8 dme-miR-1003-3p 3L - 12402911 12402960 3'utr CG32103 FlyBase G27479.1 ACACCATGTAATTTATTTGATATATCATGTGAATCTGAAGCCGATCGCAA 24 12402931 0.739951906 8 22 159 0.896551724 1.414973348 0.275862069 0.208333333 0.344827586 24 3 0 26 3L:12402911-12402960 6 29.5 1995 FBgn0052103 1942.393333 66.43 101.62 0.015187449 0.444076471 0.290297186 -3 -3 -3 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA 3L 12403209 12403214 - 3L_12403209_12403214_- 0.819729416 0.879173848 0.849451632 0.042033538 CG32103 FBtr0332090 12402293 12404054 3L - 12403051 12403451 3'utr CG32103 FlyBase G36377.1 AGTTCGTCCCATCCGACTGCTTTCGAAAGCGAATTAGCTTAGCATAAATCAGAGTGAGCCAGGCAGGCGGATTGCGAGTGGGAATCAGGTATCTGAAATCGAGGGATAGACGGATGGATACGGATACTCGGCAGCGTTTAAGCTTAAACACAAAAGACATTAAAACTACGATGTACTCGTTTTTGCTTAGATTAATCGATTACACAAAAAAATGAGAAACACTTAACGTTTACAATGTGATGATAATAGTTTATAATATACACATATAAATACATATAACTATACCTATACCTACTAAAATACCGACTTGTAAGCTTCAAATAGCTGTCGCAGTCTCTTGAGCAAGTTCGGCGGCGAGGCTGAAGAAAACTTTGTAGCATTTTATTTGTTAAGTTTAGTAA 255 12403221 0.887726428 61 235 1896 0.920792079 1.600506163 0.191419142 0.164705882 0.297029703 255 18 6 279 3L:12403051-12403451 6 CG32103 FBtr0332090 12402293 12404054 TGATGA 6mer3-8 dme-miR-2a-2-5p 3L - 12403062 12403240 3'utr CG32103 FlyBase G27481.1 ATGAGAAACACTTAACGTTTACAATGTGATGATAATAGTTTATAATATACACATATAAATACATATAACTATACCTATACCTACTAAAATACCGACTTGTAAGCTTCAAATAGCTGTCGCAGTCTCTTGAGCAAGTTCGGCGGCGAGGCTGAAGAAAACTTTGTAGCATTTTATTTGTT 145 12403208 0.987390968 33 134 1198 0.942477876 1.851258349 0.172566372 0.413793103 0.623893805 145 11 2 213 3L:12403062-12403240 6 102 1996 FBgn0052103 1942.393333 66.43 101.62 0.052512536 1.535450851 1.003739421 7 -6 0.5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 12403695 12403700 - 3L_12403695_12403700_- 0.999958571 0.999999547 0.999979059 2.89E-05 CG32103 FBtr0075982|FBtr0332090|FBtr0075983|FBtr0332089 12403503|12402293|12403503|12403503 12404054|12404054|12404054|12404054 3L - 12403625 12403745 3'utr CG32103 FlyBase G36379.1 TCTTAAAATATAAAATAAGTGATACTATGGCTAATTTATTTATAAACCAAACGCAAAGGAGAAAATGCAACATTTTGCCGTGTGCTAATCCCAAAACATTTCTTAGGCCAACAATCCTGCG 63 12403730 0.83280044 18 57 436 0.888888889 1.329058719 0.125 0.126984127 0.236111111 63 6 2 64 3L:12403625-12403745 6 CG32103 FBtr0332089|FBtr0075983|FBtr0332090|FBtr0075982 12403503|12403503|12402293|12403503 12404054|12404054|12404054|12404054 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 12403696 12403752 3'utr CG32103 FlyBase G27484.2 GTTATTTTCTTAAAATATAAAATAAGTGATACTATGGCTAATTTATTTATAAACCAA 31 12403730 0.859749123 7 29 238 0.947368421 1.556302501 0.026315789 0.225806452 0.368421053 31 2 0 36 3L:12403696-12403752 4 5 1997 FBgn0052103 1942.393333 66.43 101.62 0.002574144 0.075267199 0.049202913 30 30 30 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG 3L 12403920 12403925 - 3L_12403920_12403925_- 1 0.999999998 0.999999999 0 CG32103 FBtr0075982|FBtr0332090|FBtr0075983|FBtr0332089 12403503|12402293|12403503|12403503 12404054|12404054|12404054|12404054 3L - 12403828 12403946 3'utr CG32103 FlyBase G36380.2 GCGGCTGGTGATCCGGCTGACGCTGTGCTCCATTTTGTATAGTAGTAGCGTTAGGTTAAGTCGGCTCGGTGGTCGCCACTCGCTCTCTGCCGCAATGAGACAGTCTCGTGCTGCTTCTT 70 12403923 0.898326283 26 67 440 0.963414634 1.897627091 0.170731707 0.142857143 0.268292683 70 3 0 79 3L:12403828-12403946 6 CG32103 FBtr0332089|FBtr0075983|FBtr0332090|FBtr0075982 12403503|12403503|12402293|12403503 12404054|12404054|12404054|12404054 GCTGTG 6mer2-7 dme-miR-1008-3p 3L - 12403783 12403948 3'utr CG32103 FlyBase G27485.1 GTGCGGCTGGTGATCCGGCTGACGCTGTGCTCCATTTTGTATAGTAGTAGCGTTAGGTTAAGTCGGCTCGGTGGTCGCCACTCGCTCTCTGCCGCAATGAGACAGTCTCGTGCTGCTTCTTTCCTTAAGTGTAAAGCAGGCCTCTTCCACGTTCTGGGTTATCCGT 100 12403923 0.885428329 29 92 636 0.909722222 1.640150041 0.201388889 0.32 0.527777778 100 11 2 131 3L:12403783-12403948 6 25.5 1998 FBgn0052103 1942.393333 66.43 101.62 0.013128134 0.383862713 0.250934855 -2 -2 -2 0.1 dme-miR-999-3p 6mer2-7 GTTAAC 3L 12404020 12404025 - 3L_12404020_12404025_- 1 0.999999999 1 0 CG32103 FBtr0075982|FBtr0332090|FBtr0075983|FBtr0332089 12403503|12402293|12403503|12403503 12404054|12404054|12404054|12404054 3L - 12403953 12404085 stop_codon CG32103 FlyBase G36381.1 GAGTCGCGCCCTGGGCATTAAGATGTCGTGAGATGTCTGTCTTAATCTCGTTCCAATCAGGTTAACTCGGCTCGGCCCGGCCACCTCGGCTCTGCGGCCCCGCTCTGCAGGGCGGATCGGGCTGCGGCCGGGA 34 12404024 0.969390692 16 32 179 0.955555556 1.633468456 0.2 0.235294118 0.422222222 34 2 0 43 3L:12403953-12404085 6 CG32103 FBtr0332089|FBtr0075983|FBtr0332090|FBtr0075982 12403503|12403503|12402293|12403503 12404054|12404054|12404054|12404054 GTTAAC 6mer2-7 dme-miR-999-3p 3L - 12403953 12404147 stop_codon CG32103 FlyBase G27486.1 ACGCCAAACTTCCTCAAGGTCCTGCCGGCGGTGTCCATCAGCTACGTGGTGTACGAGTATACGAGTCGCGCCCTGGGCATTAAGATGTCGTGAGATGTCTGTCTTAATCTCGTTCCAATCAGGTTAACTCGGCTCGGCCCGGCCACCTCGGCTCTGCGGCCCCGCTCTGCAGGGCGGATCGGGCTGCGGCCGGGA 40 12404024 0.958947606 19 31 177 0.830508475 1.389166084 0.152542373 0.35 0.559322034 40 9 1 49 3L:12403953-12404147 6 15 1999 FBgn0052103 1942.393333 66.43 101.62 0.007722432 0.225801596 0.147608738 -1 -1 -1 0.1 dme-miR-932-5p 6mer2-7 GAATTG 3L 12415197 12415202 - 3L_12415197_12415202_- 0.609940093 0.999916227 0.80492816 0.275754745 ArfGAP1 FBtr0075981|FBtr0332088 12415024|12415024 12415335|12415335 3L - 12415185 12415329 3'utr ArfGAP1 FlyBase G36396.1 TGGCGAGCAGCTTATGCGATTGTATTTTTTGTATTCCATTCGGTTGTCAAGTTGTGTCTCCTTTGTTTTATGTGTCTCTTGATGTCTGGCCCCGAGGCTGCTATGCGCGCATTTAATGTAACCAACTGAATTGTGTATTCATTCT 18 12415213 0.992104708 12 16 165 0.9 0.954242509 0.1 0.111111111 0.2 18 1 1 18 3L:12415185-12415329 6 ArfGAP1 FBtr0332088|FBtr0075981 12415024|12415024 12415335|12415335 GAATTG 6mer2-7 dme-miR-932-5p 3L - 12415174 12415288 3'utr ArfGAP1 FlyBase G27502.1 GGTTGTCAAGTTGTGTCTCCTTTGTTTTATGTGTCTCTTGATGTCTGGCCCCGAGGCTGCTATGCGCGCATTTAATGTAACCAACTGAATTGTGTATTCATTCTTCGACTTCAAA 15 12415198 0.987314126 10 15 135 1 1.342422681 0.409090909 0.4 0.590909091 15 0 0 22 3L:12415174-12415288 6 5.5 2000 FBgn0020655 326.67 18.98666667 28.99333333 0.016836563 0.289676966 0.189698781 11 -4 3.5 0.1 dme-miR-8-3p 6mer3-8 CAGTAT 3L 1241811 1241816 - 3L_1241811_1241816_- 0.999998131 0.999011195 0.999504663 0.000697844 Klp61F FBtr0072733 1241566 1241967 3L - 1241773 1241918 3'utr Klp61F FlyBase G33227.1 TTAGTGGATTTCGGATCGCTGTGTTTGTTTGGCTCTTCTGGATATTCATTTTATCTGTATATCAATCTTTGGAATTTCGTACATTTATTATTTAAATAAACTCAGTATGCTATGTAAAGTTAAGGAAATCTTTAGTTCAAGTGCAG 16 1241813 0.989109591 14 15 147 0.909090909 1.301029996 0.227272727 0.25 0.454545455 16 2 0 20 3L:1241773-1241918 6 Klp61F FBtr0072733 1241566 1241967 CAGTAT 6mer3-8 dme-miR-8-3p 3L - 1241765 1241867 3'utr Klp61F FlyBase G25139.1 TATCTGTATATCAATCTTTGGAATTTCGTACATTTATTATTTAAATAAACTCAGTATGCTATGTAAAGTTAAGGAAATCTTTAGTTCAAGTGCAGGTTTAAGA 17 1241813 0.990546451 11 16 152 0.868421053 1.51851394 0.157894737 0.647058824 0.842105263 17 5 0 33 3L:1241765-1241867 6 7 2001 FBgn0004378 1433.893333 44.94333333 69.04666667 0.004881814 0.155751687 0.101380709 -3 -3 -3 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 3L 1241894 1241899 - 3L_1241894_1241899_- 0.756190899 0.949913112 0.853052005 0.136982281 Klp61F FBtr0072733 1241566 1241967 3L - 1241773 1241918 3'utr Klp61F FlyBase G33227.1 TTAGTGGATTTCGGATCGCTGTGTTTGTTTGGCTCTTCTGGATATTCATTTTATCTGTATATCAATCTTTGGAATTTCGTACATTTATTATTTAAATAAACTCAGTATGCTATGTAAAGTTAAGGAAATCTTTAGTTCAAGTGCAG 16 1241896 0.989109591 14 15 147 0.909090909 1.301029996 0.227272727 0.25 0.454545455 16 2 0 20 3L:1241773-1241918 6 Klp61F FBtr0072733 1241566 1241967 TGTGTT 6mer3-8 dme-miR-317-3p 3L - 1241886 1241930 3'utr Klp61F FlyBase G25140.1 AACCCGTTTATGTTAGTGGATTTCGGATCGCTGTGTTTGTTTGGC 7 1241893 0.990597254 6 7 65 1 1.041392685 0.181818182 0.571428571 0.727272727 7 0 0 11 3L:1241886-1241930 6 4.5 2002 FBgn0004378 1433.893333 44.94333333 69.04666667 0.003138309 0.100126085 0.065173313 -3 -6 -4.5 0.1 dme-miR-282-5p 7mer-m8 AGAGGCT 3L 12474943 12474949 - 3L_12474943_12474949_- 0.627071474 0.63009113 0.628581302 0.00213518 CG10663 FBtr0346570|FBtr0113167 12474416|12474693 12475006|12475006 3L - 12474927 12474956 3'utr CG10663 FlyBase G36401.1 AAGTTGCAGAGGCTGTGAAAAACTAATTTA 14 12474953 0.718193932 3 9 58 0.625 1 0.0625 0.142857143 0.25 14 6 0 10 3L:12474927-12474956 7 CG10663 FBtr0113167|FBtr0346570 12474693|12474416 12475006|12475006 AGAGGCT 7mer-m8 dme-miR-282-5p 3L - 12474930 12474979 3'utr CG10663 FlyBase G27508.1 GTAGACATGGACTTGGGTCCGCTAAGTTGCAGAGGCTGTGAAAAACTAAT 19 12474953 0.82769006 4 14 72 0.80952381 0.929418926 0.238095238 0.105263158 0.19047619 19 3 1 17 3L:12474930-12474979 7 14 2003 FBgn0036287 1.21 0.05 0.08 11.57024793 280 175 4 4 4 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 12492038 12492043 - 3L_12492038_12492043_- 0.999994703 1 0.999997351 3.75E-06 CG10657 FBtr0075975 12491828 12492142 3L - 12492026 12492067 3'utr CG10657 FlyBase G36406.1 AAGACGCGCGGGCATGCACACTTCGTACCTATTTAAAAGCAT 14 12492036 0.981318448 3 12 91 0.857142857 1.079181246 0.142857143 0 0 14 2 0 12 3L:12492026-12492067 6 CG10657 FBtr0075975 12491828 12492142 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L - 12491978 12492068 3'utr CG10657 FlyBase G27511.1 CAAGACGCGCGGGCATGCACACTTCGTACCTATTTAAAAGCATCACCACTAAGTTGTATAACTACGGTCTCGCGGGAACTGTGACTCCCTC 7 12492046 0.977150911 6 7 46 1 1.041392685 0.545454545 0.428571429 0.636363636 7 0 0 11 3L:12491978-12492068 6 9 2004 FBgn0036289 3.616666667 0.283333333 0.423333333 2.488479263 31.76470588 21.25984252 -7 3 -2 0.1 dme-miR-184-3p 8mer-A1 TCCGTCCA 3L 12498321 12498328 - 3L_12498321_12498328_- 0.622073632 0.630936019 0.626504826 0.006266663 CG10638 FBtr0345350 12498104 12498489 3L - 12498306 12498346 3'utr CG10638 FlyBase G36408.1 TTGATGTTCTCCATGAAATCCGTCCAGTTGCCAACGATCCG 8 12498319 0.787131608 2 8 52 1 1.079181246 0.083333333 0.25 0.5 8 0 0 12 3L:12498306-12498346 8 CG10638 FBtr0345350 12498104 12498489 TCCGTCCA 8mer-A1 dme-miR-184-3p 3L - 12498306 12498345 3'utr CG10638 FlyBase G27512.1 TGATGTTCTCCATGAAATCCGTCCAGTTGCCAACGATCCG 8 12498319 0.821608947 2 7 56 0.888888889 0.903089987 0.222222222 0.125 0.222222222 8 1 0 8 3L:12498306-12498345 8 7.5 2005 FBgn0036290 899.4033333 100.2333333 154.43 0.008338862 0.074825407 0.048565693 -9 -9 -9 0.1 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 1250109 1250115 + 3L_1250109_1250115_+ 0.823349546 0.823349537 0.823349542 0 Sac1 FBtr0303217|FBtr0072652 1250068|1250068 1250451|1250451 3L + 1250076 1250142 3'utr Sac1 FlyBase G26994.1 TGTCGTCTAGCAGAGTCACTGGGAACTACCTCTGCAGCTAAACTGTCCCATTGCTCCGAGAAAGAAC 16 1250108 0.963364916 5 15 80 0.941176471 1.204119983 0.294117647 0.0625 0.117647059 16 1 0 16 3L:1250076-1250142 7 Sac1 FBtr0303217|FBtr0072652 1250068|1250068 1250451|1250451 GCAGCTA 7mer-A1 dme-miR-980-3p 3L + 1250077 1250153 3'utr Sac1 FlyBase G20435.1 GTCGTCTAGCAGAGTCACTGGGAACTACCTCTGCAGCTAAACTGTCCCATTGCTCCGAGAAAGAACAATTGTAAACC 13 1250107 0.969472889 6 12 71 0.944444444 1.230448921 0.166666667 0.307692308 0.5 13 1 0 17 3L:1250077-1250153 7 12 2006 FBgn0035195 492.1933333 25.24666667 38.54333333 0.024380663 0.475310272 0.311337888 1 2 1.5 0.1 dme-miR-988-3p 6mer3-8 ACAAGG 3L 12502559 12502564 + 3L_12502559_12502564_+ 0.999948311 0.999999994 0.999974153 3.66E-05 CG10681 FBtr0075957|FBtr0332634 12502474|12502474 12502647|12502647 3L + 12502538 12502615 3'utr CG10681 FlyBase G29761.1 TTGTATAACCTGCTACTACATACAAGGACACAATTCGTTTAGTTAGATTTAAATGAAATATGCGTAATAATTTAAGAA 6 12502558 0.979081046 4 6 43 1 0.77815125 0 0 0 6 0 0 6 3L:12502538-12502615 6 CG10681 FBtr0332634|FBtr0075957 12502474|12502474 12502647|12502647 ACAAGG 6mer3-8 dme-miR-988-3p 3L + 12502539 12502571 3'utr CG10681 FlyBase G22530.1 TGTATAACCTGCTACTACATACAAGGACACAAT 8 12502557 0.936367957 4 7 30 0.9 0.954242509 0.1 0.25 0.4 8 1 0 9 3L:12502539-12502571 6 5.5 2007 FBgn0036291 74.39 9.18 14.21333333 0.073934669 0.59912854 0.3869606 1 2 1.5 0.1 dme-miR-92b-3p 6mer2-7 TGCAAT 3L 1250382 1250387 + 3L_1250382_1250387_+ 0.999999998 0.71304883 0.856524414 0.202905139 Sac1 FBtr0303217|FBtr0072652 1250068|1250068 1250451|1250451 3L + 1250343 1250388 3'utr Sac1 FlyBase G26997.2 GTGGAGTTGTGAAGGCGCCGCTTATTAACTGCGATTAACTGCAATG 26 1250368 0.74744521 6 25 170 0.964285714 1.130333768 0.321428571 0.076923077 0.142857143 26 0 1 27 3L:1250343-1250388 6 Sac1 FBtr0303217|FBtr0072652 1250068|1250068 1250451|1250451 TGCAAT 6mer2-7 dme-miR-92b-3p 3L + 1250351 1250386 3'utr Sac1 FlyBase G20438.1 GTGAAGGCGCCGCTTATTAACTGCGATTAACTGCAA 14 1250368 0.958121976 4 14 97 1 1.380211242 0.291666667 0.571428571 0.75 14 0 0 24 3L:1250351-1250386 5 15.5 2008 FBgn0035195 492.1933333 25.24666667 38.54333333 0.03149169 0.613942435 0.402144772 14 14 14 0.1 dme-miR-970-3p 7mer-m8 TCTTATG 3L 12505366 12505372 + 3L_12505366_12505372_+ 0.65899608 0.658999318 0.658997699 2.26E-06 vih FBtr0075958 12505147 12505821 3L + 12505323 12505382 3'utr vih FlyBase G29767.1 CGTTCAATGCTGATAGTTCATTTGGCAAAAGACCCCGTGCGTTTCTTATGTAATTGTCGA 6 12505364 0.98410851 5 6 47 1 0.77815125 0.333333333 0 0 6 0 0 6 3L:12505323-12505382 7 vih FBtr0075958 12505147 12505821 TCTTATG 7mer-m8 dme-miR-970-3p 3L + 12505352 12505378 3'utr vih FlyBase G22535.1 AGACCCCGTGCGTTTCTTATGTAATTG 5 12505365 0.833956576 3 5 37 1 0.84509804 0.428571429 0.4 0.571428571 5 0 0 7 3L:12505352-12505378 7 4.5 2009 FBgn0264848 630.4033333 52.49 79.89666667 0.007138287 0.085730615 0.05632275 2 1 1.5 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 12505632 12505637 + 3L_12505632_12505637_+ 1 1 1 0 vih FBtr0075958 12505147 12505821 3L + 12505604 12505650 3'utr vih FlyBase G29770.1 AAGCGACTATGCTGCTGCGCCGGCCATTATGTGAATGTTAGCTAATT 25 12505631 0.691748466 7 25 173 1 1.491361694 0.193548387 0.2 0.35483871 25 0 0 31 3L:12505604-12505650 6 vih FBtr0075958 12505147 12505821 ATGTGA 6mer3-8 dme-miR-1003-3p 3L + 12505594 12505648 3'utr vih FlyBase G22537.1 GATGATTTTTAAGCGACTATGCTGCTGCGCCGGCCATTATGTGAATGTTAGCTAA 18 12505639 0.627681633 7 17 120 0.96969697 1.505149978 0 0.444444444 0.696969697 18 1 0 32 3L:12505594-12505648 6 17.5 2010 FBgn0264848 630.4033333 52.49 79.89666667 0.027760005 0.333396837 0.219032918 1 -7 -3 0.1 dme-miR-304-5p 7mer-m8 TGAGATT 3L 12508106 12508112 - 3L_12508106_12508112_- 0.620190841 0.62018385 0.620187346 4.88E-06 sti FBtr0075970|FBtr0332643 12507996|12507996 12508356|12508356 3L - 12508091 12508129 3'utr sti FlyBase G36418.1 TATACACAAATAAAACTTGAGATTTTGATAAAAAAGGTA 16 12508113 0.809919574 4 15 104 1 1.278753601 0 0.1875 0.315789474 16 0 0 19 3L:12508091-12508129 7 sti FBtr0075970|FBtr0332643 12507996|12507996 12508356|12508356 TGAGATT 7mer-m8 dme-miR-304-5p 3L - 12508100 12508140 3'utr sti FlyBase G27519.1 ACTTTGTGCTGTATACACAAATAAAACTTGAGATTTTGATA 9 12508113 0.853816163 3 9 69 1 1.113943352 0 0.333333333 0.538461538 9 0 0 13 3L:12508100-12508140 7 11.5 2011 FBgn0002466 1895.133333 37.79 58.17333333 0.006068175 0.30431331 0.197685079 1 1 1 0.1 dme-miR-932-5p 7mer-A1 GAATTGA 3L 12519225 12519231 + 3L_12519225_12519231_+ 0.731659037 0.731659037 0.731659037 0 tral FBtr0332635|FBtr0332642|FBtr0332636|FBtr0332641|FBtr0332638|FBtr0332639|FBtr0332637|FBtr0332640|FBtr0075959 12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150 12520954|12519695|12519695|12519695|12519695|12519695|12520954|12519695|12519695 3L + 12519186 12519246 3'utr tral FlyBase G29788.1 ACACCAACCACAACCAACAAACCACAAATTGATAGATGCGAATTGAGAAGAGCGTAAAGTA 10 12519228 0.943966455 5 9 37 1 1.041392685 0.363636364 0.222222222 0.363636364 9 0 0 11 3L:12519186-12519246 7 tral FBtr0332639|FBtr0332637|FBtr0332640|FBtr0075959|FBtr0332635|FBtr0332636|FBtr0332642|FBtr0332641|FBtr0332638 12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150 12519695|12520954|12519695|12519695|12520954|12519695|12519695|12519695|12519695 GAATTGA 7mer-A1 dme-miR-932-5p 3L + 12519151 12519245 3'utr tral FlyBase G22544.1 GTGCCGCCCGGCCAGTGGAAAGCCACTTTAAATATACACCAACCACAACCAACAAACCACAAATTGATAGATGCGAATTGAGAAGAGCGTAAAGT 8 12519228 0.937618104 7 7 31 1 1.113943352 0.384615385 0.5 0.692307692 8 0 0 13 3L:12519151-12519245 7 6 2012 FBgn0041775 2554.613333 85.08333333 130.6233333 0.002348692 0.070519099 0.0459336 -3 -3 -3 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 12519509 12519514 + 3L_12519509_12519514_+ 0.952652406 0.879033831 0.915843118 0.052056211 tral FBtr0332635|FBtr0332642|FBtr0332636|FBtr0332641|FBtr0332638|FBtr0332639|FBtr0332637|FBtr0332640|FBtr0075959 12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150 12520954|12519695|12519695|12519695|12519695|12519695|12520954|12519695|12519695 3L + 12519463 12519526 3'utr tral FlyBase G29790.1 AGCGCTCTACGATTCGATTAATGATTAGCGACTAGCGCGAATGTGAATGTGAATGTGAACCGAA 24 12519509 0.966297742 10 22 121 0.925925926 1.096910013 0.444444444 0.125 0.222222222 24 1 1 25 3L:12519463-12519526 6 tral FBtr0332639|FBtr0332637|FBtr0332640|FBtr0075959|FBtr0332635|FBtr0332636|FBtr0332642|FBtr0332641|FBtr0332638 12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150 12519695|12520954|12519695|12519695|12520954|12519695|12519695|12519695|12519695 ATGTGA 6mer3-8 dme-miR-1003-3p 3L + 12519471 12519518 3'utr tral FlyBase G22547.1 ACGATTCGATTAATGATTAGCGACTAGCGCGAATGTGAATGTGAATGT 15 12519488 0.82186454 7 15 89 1 1.322219295 0.476190476 0.266666667 0.476190476 15 0 0 21 3L:12519471-12519518 6 14.5 2013 FBgn0041775 2554.613333 85.08333333 130.6233333 0.005676006 0.170421156 0.111006201 0 21 10.5 0.1 dme-miR-304-5p 6mer2-7 GAGATT 3L 12519745 12519750 + 3L_12519745_12519750_+ 0.879587296 0.965467634 0.922527465 0.060726543 tral FBtr0332635|FBtr0332637 12519150|12519150 12520954|12520954 3L + 12519710 12519771 3'utr tral FlyBase G29793.1 AACGAAAGCAACCATTTAGCAAGGAGAGGAGCAAGGAGATTTGGCGGAGGAGCCGATAACAA 13 12519750 0.826712978 5 12 27 1 1.176091259 0.333333333 0.153846154 0.266666667 13 0 0 15 3L:12519710-12519771 6 tral FBtr0332637|FBtr0332635 12519150|12519150 12520954|12520954 GAGATT 6mer2-7 dme-miR-304-5p 3L + 12519715 12519765 3'utr tral FlyBase G22549.1 AAGCAACCATTTAGCAAGGAGAGGAGCAAGGAGATTTGGCGGAGGAGCCGA 7 12519750 0.910538684 4 4 11 0.636363636 0.84509804 0 0.571428571 0.727272727 7 4 0 7 3L:12519715-12519765 6 8 2014 FBgn0041775 2554.613333 85.08333333 130.6233333 0.003131589 0.094025465 0.061244801 -5 -5 -5 0.1 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 12519998 12520005 + 3L_12519998_12520005_+ 0.668734332 0.668734343 0.668734337 0 tral FBtr0332635|FBtr0332637 12519150|12519150 12520954|12520954 3L + 12519982 12520021 3'utr tral FlyBase G29795.1 AAAAGAAAATAAAATCGGCAGCTACGCGCTTCTATCAAAA 104 12519996 0.895315589 5 91 412 0.872 1.560305243 0.072 0.153846154 0.296 104 14 2 109 3L:12519982-12520021 8 tral FBtr0332637|FBtr0332635 12519150|12519150 12520954|12520954 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L + 12519981 12520026 3'utr tral FlyBase G22550.1 AAAAAGAAAATAAAATCGGCAGCTACGCGCTTCTATCAAAAGCACA 67 12519996 0.857844646 5 63 246 0.978947368 1.968482949 0.178947368 0.313432836 0.515789474 67 2 0 93 3L:12519981-12520026 8 84.5 2015 FBgn0041775 2554.613333 85.08333333 130.6233333 0.033077413 0.993143976 0.646898206 2 2 2 0.1 dme-bantam-3p 7mer-m8 TGATCTC 3L 12520197 12520203 + 3L_12520197_12520203_+ 0.661615228 0.661615222 0.661615225 0 tral FBtr0332635|FBtr0332637 12519150|12519150 12520954|12520954 3L + 12520159 12520222 3'utr tral FlyBase G29796.1 AAGCCCAAATTTTCGGTTTTCGTACAGTTTATTTTCTCTGATCTCGGTTGGGCAAGGGAAATTA 88 12520197 0.99033327 8 82 827 0.922330097 1.67669361 0.27184466 0.125 0.252427184 88 7 1 95 3L:12520159-12520222 7 tral FBtr0332637|FBtr0332635 12519150|12519150 12520954|12520954 TGATCTC 7mer-m8 dme-bantam-3p 3L + 12520172 12520231 3'utr tral FlyBase G22551.1 CGGTTTTCGTACAGTTTATTTTCTCTGATCTCGGTTGGGCAAGGGAAATTATACTTACGA 50 12520197 0.978167442 8 46 513 0.898734177 1.550228353 0.443037975 0.42 0.632911392 50 7 1 71 3L:12520172-12520231 7 68 2016 FBgn0041775 2554.613333 85.08333333 130.6233333 0.02661851 0.799216454 0.520580805 0 0 0 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA 3L 12520266 12520271 + 3L_12520266_12520271_+ 0.999959961 0.999368491 0.999664226 0.000418254 tral FBtr0332635|FBtr0332637 12519150|12519150 12520954|12520954 3L + 12520243 12520329 3'utr tral FlyBase G29797.1 TTGAAAAGATACGATACCTATGGTGATGATGTTCTCAATGTAAATGTTAAGATTGATTGTGTGATTCACTGGCTGCTGCGCTTGAAA 41 12520271 0.737726945 12 36 333 0.894736842 1.707570176 0.333333333 0.341463415 0.526315789 41 6 0 51 3L:12520243-12520329 6 tral FBtr0332637|FBtr0332635 12519150|12519150 12520954|12520954 TGATGA 6mer3-8 dme-miR-2a-2-5p 3L + 12520247 12520327 3'utr tral FlyBase G22552.1 AAAGATACGATACCTATGGTGATGATGTTCTCAATGTAAATGTTAAGATTGATTGTGTGATTCACTGGCTGCTGCGCTTGA 45 12520270 0.721657385 13 40 387 0.87654321 1.152288344 0.37037037 0.444444444 0.691358025 45 6 4 71 3L:12520247-12520327 6 30 2017 FBgn0041775 2554.613333 85.08333333 130.6233333 0.01174346 0.352595495 0.229668002 -5 -4 -4.5 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 12527471 12527477 - 3L_12527471_12527477_- 0.661615626 0.661615537 0.661615581 7.07E-08 nst FBtr0075967 12527213 12527630 3L - 12527448 12527501 3'utr nst FlyBase G36463.1 ATTCTGCAAATGTTCACTGTCTTTTGTGTTCTAAAGATGACATATTTTTTGCCA 25 12527478 0.659621256 8 25 263 1 1.431363764 0.074074074 0.08 0.148148148 25 0 0 27 3L:12527448-12527501 7 nst FBtr0075967 12527213 12527630 TGTGTTC 7mer-m8 dme-miR-317-3p 3L - 12527434 12527632 stop_codon nst FlyBase G27549.1 AGAGCGGAATGACGAACTAACCTCTCACGGGAATCGACAATTGACACAGATCCTGGATGGAGCAATAAATCTCTTTACTCTAAGGTGCTCAATAACTTAAAAAAAAAACAACTTAACTCTCAAACGCATTTATTCTGCAAATGTTCACTGTCTTTTGTGTTCTAAAGATGACATATTTTTTGCCATTATTTATAAAGTT 42 12527478 0.985356046 20 39 326 0.967213115 1.770852012 0.196721311 0.30952381 0.524590164 42 2 0 59 3L:12527434-12527632 7 19 2018 FBgn0036298 243.65 13.55666667 20.85333333 0.07798071 1.401524465 0.91112532 1 1 1 0.1 "dme-miR-995-3p,dme-miR-998-3p" 6mer2-7 GGTGCT 3L 12527544 12527549 - 3L_12527544_12527549_- 0.998718653 0.838166222 0.918442438 0.113527761 nst FBtr0075967 12527213 12527630 3L - 12527506 12527595 3'utr nst FlyBase G36464.1 CAATTGACACAGATCCTGGATGGAGCAATAAATCTCTTTACTCTAAGGTGCTCAATAACTTAAAAAAAAAACAACTTAACTCTCAAACGC 26 12527559 0.987831783 9 22 190 0.6875 1.342422681 0.125 0.115384615 0.28125 26 10 0 22 3L:12527506-12527595 6 nst FBtr0075967 12527213 12527630 GGTGCT 6mer2-7 "dme-miR-995-3p,dme-miR-998-3p" 3L - 12527434 12527632 stop_codon nst FlyBase G27549.1 AGAGCGGAATGACGAACTAACCTCTCACGGGAATCGACAATTGACACAGATCCTGGATGGAGCAATAAATCTCTTTACTCTAAGGTGCTCAATAACTTAAAAAAAAAACAACTTAACTCTCAAACGCATTTATTCTGCAAATGTTCACTGTCTTTTGTGTTCTAAAGATGACATATTTTTTGCCATTATTTATAAAGTT 42 12527558 0.985356046 20 39 326 0.967213115 1.770852012 0.196721311 0.30952381 0.524590164 42 2 0 59 3L:12527434-12527632 6 11 2019 FBgn0036298 243.65 13.55666667 20.85333333 0.045146727 0.811408901 0.527493606 10 9 9.5 0.1 dme-miR-184-3p 7mer-m8 TCCGTCC 3L 12530631 12530637 - 3L_12530631_12530637_- 0.661608189 0.661607856 0.661608023 2.12E-07 Tsf2 FBtr0075966 12530434 12530747 3L - 12530554 12530742 3'utr Tsf2 FlyBase G36473.2 TAGACTCACTTAGATTTCAGAATTCTACAAGCATCTCTAGCACAAAGAGAAAACATATCAACATTTTTACATTCCAAATATGATTAAGTTAAATGTGAAATCCCTTCCGTCCGAAAATGAAACTCTAACTAGCCGAAAAATATCTGTTGAAGGCTATAGTTTATAATTTATAAAGTCCTGTGCCTTATT 1471 12530638 0.902688607 34 1430 6990 0.982896847 2.565611725 0.631747728 0.205982325 0.375734901 1471 28 4 1839 3L:12530554-12530742 7 Tsf2 FBtr0075966 12530434 12530747 TCCGTCC 7mer-m8 dme-miR-184-3p 3L - 12530609 12530744 3'utr Tsf2 FlyBase G27552.3 ACTAGACTCACTTAGATTTCAGAATTCTACAAGCATCTCTAGCACAAAGAGAAAACATATCAACATTTTTACATTCCAAATATGATTAAGTTAAATGTGAAATCCCTTCCGTCCGAAAATGAAACTCTAACTAGCC 1090 12530638 0.936300892 17 1075 4916 0.981976383 2.420505837 0.617153511 0.351376147 0.560596644 1090 24 5 1580 3L:12530609-12530744 7 1192 2020 FBgn0036299 169.6666667 7.166666667 11.03333333 7.025540275 166.3255814 108.0362538 1 1 1 0.1 dme-miR-8-3p 6mer2-7 AGTATT 3L 12537736 12537741 - 3L_12537736_12537741_- 0.999933762 1 0.999966881 4.68E-05 sowah FBtr0300889|FBtr0300888|FBtr0300887 12537511|12537511|12537511 12537814|12537814|12538184 3L - 12537724 12537762 3'utr sowah FlyBase G36484.1 CATTGACCATGGAATCGTGAAAGTATTTGTTTTTCAATT 9 12537735 0.804740307 5 9 76 1 1 0.5 0.111111111 0.2 9 0 0 10 3L:12537724-12537762 6 sowah FBtr0300887|FBtr0300888|FBtr0300889 12537511|12537511|12537511 12538184|12537814|12537814 AGTATT 6mer2-7 dme-miR-8-3p 3L - 12537728 12537759 3'utr sowah FlyBase G27558.1 TGACCATGGAATCGTGAAAGTATTTGTTTTTC 7 12537745 0.738529573 4 7 59 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 3L:12537728-12537759 6 8 2021 FBgn0036302 1488.053333 89.81666667 136.7766667 0.005376151 0.089070328 0.058489508 -6 4 -1 0.1 dme-miR-305-3p 6mer3-8 ATGTGC 3L 12741059 12741064 + 3L_12741059_12741064_+ 0.916538376 0.999507237 0.958022807 0.058667801 Ptp69D FBtr0075914|FBtr0075913 12740996|12740996 12741568|12741568 3L + 12741013 12741082 3'utr Ptp69D FlyBase G29832.1 ACTTATACGAGTACAGAATGCACGTGTTGGAACATCAATGCATCAAATGTGCTATGATAAATTATTTGTA 63 12741060 0.824824042 10 61 449 0.971014493 1.348953548 0.072463768 0.095238095 0.173913043 63 0 2 67 3L:12741013-12741082 6 Ptp69D FBtr0075914|FBtr0075913 12740996|12740996 12741568|12741568 ATGTGC 6mer3-8 dme-miR-305-3p 3L + 12741015 12741083 3'utr Ptp69D FlyBase G22575.1 TTATACGAGTACAGAATGCACGTGTTGGAACATCAATGCATCAAATGTGCTATGATAAATTATTTGTAT 34 12741060 0.985104445 7 32 260 0.964285714 1.73239376 0.214285714 0.441176471 0.660714286 34 2 0 54 3L:12741015-12741083 6 41 2022 FBgn0014007 2746.713333 63.97333333 98.05 0.014926931 0.640892038 0.418154003 -1 -1 -1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 3L 12741211 12741217 + 3L_12741211_12741217_+ 0.671768223 0.671768527 0.671768375 2.12E-07 Ptp69D FBtr0075914|FBtr0075913 12740996|12740996 12741568|12741568 3L + 12741178 12741237 3'utr Ptp69D FlyBase G29833.1 AATGTAGTGTATACGTATCGTATTGATAAAACTACCAAAGGAAAATAAGTAACATATTTT 78 12741210 0.966222122 5 77 212 0.978494624 1.959041392 0.010752688 0.153846154 0.290322581 78 2 0 91 3L:12741178-12741237 7 Ptp69D FBtr0075914|FBtr0075913 12740996|12740996 12741568|12741568 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 12741193 12741224 3'utr Ptp69D FlyBase G22576.1 TATCGTATTGATAAAACTACCAAAGGAAAATA 53 12741210 0.954896332 3 51 117 0.95890411 1.367976785 0.01369863 0.339622642 0.520547945 53 1 2 70 3L:12741193-12741224 7 64.5 2023 FBgn0014007 2746.713333 63.97333333 98.05 0.023482611 1.008232597 0.657827639 1 1 1 0.1 dme-miR-305-3p 6mer3-8 ATGTGC 3L 12746555 12746560 + 3L_12746555_12746560_+ 1 1 1 0 CG32109 FBtr0075918 12746477 12746770 3L + 12746525 12746582 3'utr CG32109 FlyBase G29838.1 AATAATAAATGTTAAGCTGATTCCACTGTAATGTGCTATATCTGGTCCGTATTTTTGG 24 12746557 0.997597545 8 11 234 0.53125 0.929418926 0.09375 0.25 0.4375 24 14 1 17 3L:12746525-12746582 6 CG32109 FBtr0075918 12746477 12746770 ATGTGC 6mer3-8 dme-miR-305-3p 3L + 12746534 12746574 3'utr CG32109 FlyBase G22580.1 TGTTAAGCTGATTCCACTGTAATGTGCTATATCTGGTCCGT 14 12746556 0.998342382 5 6 133 0.3 0.954242509 0 0.714285714 0.866666667 14 21 0 9 3L:12746534-12746574 6 16.5 2024 FBgn0052109 192.0866667 22.89 35.27333333 0.085898726 0.720838794 0.467775468 -2 -1 -1.5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 12746628 12746633 - 3L_12746628_12746633_- 0.9700407 0.999999692 0.985020196 0.021184212 Klc FBtr0075951|FBtr0331556|FBtr0331555 12746614|12746614|12746614 12746812|12746812|12746812 3L - 12746618 12746675 3'utr Klc FlyBase G36504.1 TACCTTGTTATTTCAAAAAATATGTACCGCTTTTAATAATAAACCAAATATATTTAAC 6 12746643 0.985718879 6 6 45 1 0.954242509 0 0.5 0.666666667 6 0 0 9 3L:12746618-12746675 6 Klc FBtr0331556|FBtr0331555|FBtr0075951 12746614|12746614|12746614 12746812|12746812|12746812 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 12746631 12746662 3'utr Klc FlyBase G27572.1 CAAAAAATATGTACCGCTTTTAATAATAAACC 7 12746643 0.540592785 4 6 48 0.909090909 1 0.090909091 0.571428571 0.727272727 7 1 0 10 3L:12746631-12746662 2 3.5 2025 FBgn0010235 1734.466667 114.96 176.2933333 0.002017911 0.030445372 0.019853275 10 10 10 0.1 dme-miR-305-3p 6mer3-8 ATGTGC 3L 12784674 12784679 - 3L_12784674_12784679_- 0.999965191 0.999994187 0.999979689 2.05E-05 Atg1 FBtr0075945 12784427 12785336 3L - 12784649 12784736 3'utr Atg1 FlyBase G36532.1 TTATATTATAAACATACCATACAATATTGATGGCTGCACTACACAAACATGTTTACAATGTGCTATGTTCATAGTTTTTAGTTAGGTC 40 12784704 0.786161801 15 37 296 0.955555556 1.633468456 0.177777778 0.05 0.155555556 40 2 0 43 3L:12784649-12784736 6 Atg1 FBtr0075945 12784427 12785336 ATGTGC 6mer3-8 dme-miR-305-3p 3L - 12784643 12784737 3'utr Atg1 FlyBase G27592.1 ATTATATTATAAACATACCATACAATATTGATGGCTGCACTACACAAACATGTTTACAATGTGCTATGTTCATAGTTTTTAGTTAGGTCTTTTCT 25 12784678 0.895281766 6 23 198 0.96969697 1.505149978 0.151515152 0.24 0.424242424 25 1 0 32 3L:12784643-12784737 6 10.5 2026 FBgn0260945 853.22 25.63333333 39.42333333 0.012306322 0.409622887 0.266339731 25 -1 12 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3L 12785223 12785229 - 3L_12785223_12785229_- 0.42097598 0.419851313 0.420413646 0.000795283 Atg1 FBtr0075945|FBtr0300561 12784427|12785129 12785336|12785336 3L - 12785177 12785254 3'utr Atg1 FlyBase G36537.1 ACCGTTTTCGTTGGGAGTGCAAACATGTGATTGAAACAAAAACTACACTATCCATACATAGACATACCTACAAATAAT 246 12785223 0.968868263 10 231 1275 0.950177936 1.949390007 0.387900356 0.134146341 0.241992883 246 12 2 267 3L:12785177-12785254 7 Atg1 FBtr0075945|FBtr0300561 12784427|12785129 12785336|12785336 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 12785186 12785252 3'utr Atg1 FlyBase G27596.1 CGTTTTCGTTGGGAGTGCAAACATGTGATTGAAACAAAAACTACACTATCCATACATAGACATACCT 180 12785223 0.966771843 6 173 932 0.96819788 2.437750563 0.395759717 0.416666667 0.628975265 180 9 0 274 3L:12785186-12785252 7 205 2027 FBgn0260945 853.22 25.63333333 39.42333333 0.240266285 7.99739922 5.199966179 -6 -6 -6 0.1 dme-miR-304-5p 8mer-A1 TGAGATTA 3L 12824572 12824579 + 3L_12824572_12824579_+ 0.625363353 0.625363359 0.625363356 0 CG42588 FBtr0304053|FBtr0301717 12824517|12824517 12824650|12824650 3L + 12824528 12824588 3'utr CG42588 FlyBase G29883.1 TGGAAACACACTGGTAACAGAAAATCTTCTGAACAAGCACCATCTGAGATTATAACTTATT 14 12824570 0.976945955 5 12 75 0.894736842 1.230448921 0 0.214285714 0.421052632 14 2 0 17 3L:12824528-12824588 8 CG42588 FBtr0301717|FBtr0304053 12824517|12824517 12824650|12824650 TGAGATTA 8mer-A1 dme-miR-304-5p 3L + 12824537 12824590 3'utr CG42588 FlyBase G22612.1 ACTGGTAACAGAAAATCTTCTGAACAAGCACCATCTGAGATTATAACTTATTGT 13 12824571 0.9810472 6 12 77 0.941176471 1.204119983 0 0.230769231 0.411764706 13 1 0 16 3L:12824537-12824590 8 10.5 2028 FBgn0260965 649.5 9.203333333 14.18 0.016166282 1.140890982 0.740479549 2 1 1.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 12852253 12852258 + 3L_12852253_12852258_+ 0.998371583 0.998451383 0.998411483 5.64E-05 Wbp2 FBtr0273240|FBtr0273241|FBtr0332047 12852235|12852235|12852235 12853169|12853169|12853169 3L + 12852232 12852276 stop_codon Wbp2 FlyBase G29892.1 TGTAATTAAAAGCAAACTACTGTACCTCAAATAGCCATCCCGACA 37 12852252 0.654453339 4 37 153 1 1.662757832 0.152173913 0.189189189 0.347826087 37 0 0 46 3L:12852232-12852276 6 Wbp2 FBtr0332047|FBtr0273240|FBtr0273241 12852235|12852235|12852235 12853169|12853169|12853169 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 12852235 12852276 stop_codon Wbp2 FlyBase G22617.1 AATTAAAAGCAAACTACTGTACCTCAAATAGCCATCCCGACA 32 12852252 0.920082361 5 32 131 1 1.72427587 0.150943396 0.5 0.698113208 32 0 0 53 3L:12852235-12852276 6 34.5 2029 FBgn0036318 1204.006667 91.87 139.8366667 0.028654326 0.375530641 0.246716407 1 1 1 0.1 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 12894546 12894553 + 3L_12894546_12894553_+ 0.643499586 0.643564391 0.643531988 4.58E-05 CG14118 FBtr0075870 12894495 12894758 3L + 12894528 12894564 3'utr CG14118 FlyBase G29896.1 TTTTAAGTGAGTGCAATAAAGACTGAGTGAGTTGTGT 18 12894544 0.872400093 3 17 87 0.947368421 1.255272505 0.736842105 0.055555556 0.105263158 18 1 0 18 3L:12894528-12894564 8 CG14118 FBtr0075870 12894495 12894758 AAGACTGA 8mer-A1 dme-miR-14-3p 3L + 12894529 12894566 3'utr CG14118 FlyBase G22619.1 TTTAAGTGAGTGCAATAAAGACTGAGTGAGTTGTGTGA 14 12894544 0.879132243 2 14 71 1 1.278753601 0.631578947 0.285714286 0.473684211 14 0 0 19 3L:12894529-12894566 8 16 2030 FBgn0036323 1 0.083333333 0.13 16 192 123.0769231 2 2 2 0.1 dme-miR-304-5p 8mer-A1 TGAGATTA 3L 1299857 1299864 + 3L_1299857_1299864_+ 0.625358492 0.625359809 0.625359151 9.19E-07 scf FBtr0089941|FBtr0089942 1299832|1299832 1300389|1300389 3L + 1299831 1299963 stop_codon scf FlyBase G27015.1 TAGAGTGTCTAGATACCCAGAATCCCTGAGATTAAGATTGATCCTATGAATCTCCCACTTCGCATGCCAAATAACTTGTAATCTTGTCTAGCCCTTAAGACCTTAAGAAAGTGCATTATAAACCGACTCGAAT 587 1299862 0.890049899 29 559 3878 0.949712644 1.820201459 0.096264368 0.160136286 0.291666667 587 26 9 661 3L:1299831-1299963 8 scf FBtr0089941|FBtr0089942 1299832|1299832 1300389|1300389 TGAGATTA 8mer-A1 dme-miR-304-5p 3L + 1299711 1299961 stop_codon scf FlyBase G20453.1 GAGGCCGATGCGGACCACGATGATAAGTTGACAAAGGAGGAAATACTAGACAAGTACGACGTTTTCGTCGGCTCCCAGGCCACCGATTTCGGCGAGGCCTTGGCCCGCCACGATGAGTTCTAGAGTGTCTAGATACCCAGAATCCCTGAGATTAAGATTGATCCTATGAATCTCCCACTTCGCATGCCAAATAACTTGTAATCTTGTCTAGCCCTTAAGACCTTAAGAAAGTGCATTATAAACCGACTCGA 386 1299862 0.979498298 39 361 2483 0.942857143 1.845872874 0.090756303 0.383419689 0.6 386 27 7 561 3L:1299711-1299961 8 269.5 2031 FBgn0025682 1802 152.5933333 234.48 0.149556049 1.766132203 1.149351757 -5 -5 -5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3L 1300222 1300228 + 3L_1300222_1300228_+ 0.82331001 0.823305252 0.823307631 3.32E-06 scf FBtr0089941|FBtr0089942 1299832|1299832 1300389|1300389 3L + 1300135 1300233 3'utr scf FlyBase G27017.2 AGATACGCCGCCTTTGCCTGTGTAACATATGTATAAACATAAATGATTTTCGCTGTAGCCCGATTTATTTCCAGCTGCGAGAACATTCCAAAGAGAGTG 68 1300220 0.841920804 12 65 265 0.964705882 1.311753861 0.411764706 0.176470588 0.341176471 68 0 3 82 3L:1300135-1300233 7 scf FBtr0089941|FBtr0089942 1299832|1299832 1300389|1300389 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 1300182 1300233 3'utr scf FlyBase G20454.2 TTTCGCTGTAGCCCGATTTATTTCCAGCTGCGAGAACATTCCAAAGAGAGTG 28 1300220 0.809028302 5 27 85 1 1.643452676 0.386363636 0.535714286 0.704545455 28 0 0 44 3L:1300182-1300233 7 34 2032 FBgn0025682 1802 152.5933333 234.48 0.018867925 0.222814452 0.145001706 2 2 2 0.1 dme-miR-14-3p 7mer-A1 AGACTGA 3L 13009226 13009232 + 3L_13009226_13009232_+ 0.823182843 0.822673408 0.822928125 0.0003602 CG14117 FBtr0306091|FBtr0332074 13009186|13008969 13009450|13009450 3L + 13009209 13009249 3'utr CG14117 FlyBase G29898.1 AATAACCCCAGATTTCGAGACTGATGGCTCAGAACGGATAT 36 13009223 0.616156631 5 36 185 1 1.591064607 0.102564103 0.055555556 0.128205128 36 0 0 39 3L:13009209-13009249 7 CG14117 FBtr0332074|FBtr0306091 13008969|13009186 13009450|13009450 AGACTGA 7mer-A1 dme-miR-14-3p 3L + 13009209 13009290 3'utr CG14117 FlyBase G22622.1 AATAACCCCAGATTTCGAGACTGATGGCTCAGAACGGATATGCGTCAAATTAAACGAGGATGTAGCCTTTAGCTATTTAGTT 38 13009233 0.905760003 8 38 207 1 1.77815125 0.183333333 0.342105263 0.583333333 38 0 0 60 3L:13009209-13009290 7 32 2033 FBgn0036331 82 9.843333333 15.15333333 0.390243902 3.250931256 2.11174659 3 -7 -2 0.1 dme-miR-92b-3p 7mer-m1 TGCAATT 3L 1301189 1301195 - 3L_1301189_1301195_- 0.765585493 0.66391247 0.714748981 0.071893668 Rac1 FBtr0331868|FBtr0072730 1300877|1300964 1301767|1301767 3L - 1301177 1301284 3'utr Rac1 FlyBase G33252.1 TGAGCATAAAGCATAGATGTCGCATAGATGTTGATCGAAGGTCCTGCGGAAGGGATCAGGATATTGAGTCAGTAAAGTAAACGTTCCATTGCAATTACACTTACATTA 16 1301198 0.810351232 9 15 81 1 1.278753601 0.263157895 0.1875 0.315789474 16 0 0 19 3L:1301177-1301284 7 Rac1 FBtr0331868|FBtr0072730 1300877|1300964 1301767|1301767 TGCAATT 7mer-m1 dme-miR-92b-3p 3L - 1301122 1301232 3'utr Rac1 FlyBase G25157.1 GGATCAGGATATTGAGTCAGTAAAGTAAACGTTCCATTGCAATTACACTTACATTATTACATACTTGTATTTAGATGTTGTTGGATATCGAAGCGACGGCGCGGGCGAGTA 12 1301190 0.973698504 9 10 69 0.8 0.602059991 0.1 0.5 0.7 12 1 3 16 3L:1301122-1301232 7 5 2034 FBgn0010333 1433.84 96.69333333 148.01 0.003487139 0.051709873 0.033781501 3 -5 -1 0.1 dme-miR-282-5p 6mer2-7 GAGGCT 3L 13020073 13020078 - 3L_13020073_13020078_- 0.999671564 0.999844357 0.99975796 0.000122188 AdenoK FBtr0075895|FBtr0075896|FBtr0346531 13019980|13019980|13019713 13020289|13020289|13020289 3L - 13020034 13020097 3'utr AdenoK FlyBase G36605.1 ATGAACAAATAGAGAGAGTGAGGCTTGTGTCTTATAGATAGAGCAATATTCGAATTTAAATTGA 83 13020079 0.974881337 5 81 503 0.97752809 1.939519253 0.146067416 0.072289157 0.134831461 83 2 0 87 3L:13020034-13020097 6 AdenoK FBtr0075896|FBtr0346531|FBtr0075895 13019980|13019713|13019980 13020289|13020289|13020289 GAGGCT 6mer2-7 dme-miR-282-5p 3L - 13020035 13020101 3'utr AdenoK FlyBase G27639.1 TGACATGAACAAATAGAGAGAGTGAGGCTTGTGTCTTATAGATAGAGCAATATTCGAATTTAAATTG 41 13020079 0.975020172 6 40 251 0.983333333 1.770852012 0.183333333 0.317073171 0.533333333 41 1 0 59 3L:13020035-13020101 6 60 2035 FBgn0036337 473.9933333 36.92 56.63666667 0.126584059 1.625135428 1.05938438 1 1 1 0.1 dme-miR-999-3p 7mer-A1 GTTAACA 3L 13020168 13020174 - 3L_13020168_13020174_- 0.823349481 0.823349391 0.823349436 7.07E-08 AdenoK FBtr0075895|FBtr0075896|FBtr0346531 13019980|13019980|13019713 13020289|13020289|13020289 3L - 13020160 13020202 3'utr AdenoK FlyBase G36606.1 AAGTAAATGAGAGTGACTAAAAGATTTTGTTAACACTGATAAT 27 13020175 0.662619382 6 26 215 0.971428571 1.531478917 0.257142857 0.222222222 0.4 27 1 0 34 3L:13020160-13020202 7 AdenoK FBtr0075896|FBtr0346531|FBtr0075895 13019980|13019713|13019980 13020289|13020289|13020289 GTTAACA 7mer-A1 dme-miR-999-3p 3L - 13020164 13020231 3'utr AdenoK FlyBase G27640.1 AAGCGCAGCAAGATTTGCAATTGTTAATTAAGTAAATGAGAGTGACTAAAAGATTTTGTTAACACTGA 19 13020175 0.983059798 6 18 153 0.941176471 1.505149978 0.117647059 0.631578947 0.794117647 19 2 0 32 3L:13020164-13020231 7 20 2036 FBgn0036337 473.9933333 36.92 56.63666667 0.042194686 0.541711809 0.353128127 1 1 1 0.1 dme-miR-980-3p 6mer2-7 GCAGCT 3L 1311764 1311769 - 3L_1311764_1311769_- 0.999999347 0.999999706 0.999999526 2.83E-07 CG9186 FBtr0072728|FBtr0072727 1311717|1311717 1311929|1311929 3L - 1311720 1311900 3'utr CG9186 FlyBase G33267.1 AGCCCTGTCCATTACCTAATCCATCCATGCCAATAGACTTGGGAATCCGGATTACGGTTGAACAGCAAACCAATAGCAATTACTCCACTGCCTTTGTGTGGCAATTAGTTCGTTTTTATTAGTATCTTTTTGCAGCTCTCGAAGACAACTCTAAATATAGTCAAAAGTGATTTAACACGGT 78 1311771 0.883379304 21 78 564 1 2.037426498 0.036697248 0.307692308 0.504587156 78 0 0 109 3L:1311720-1311900 6 CG9186 FBtr0072728|FBtr0072727 1311717|1311717 1311929|1311929 GCAGCT 6mer2-7 dme-miR-980-3p 3L - 1311723 1311794 3'utr CG9186 FlyBase G25170.1 AGTTCGTTTTTATTAGTATCTTTTTGCAGCTCTCGAAGACAACTCTAAATATAGTCAAAAGTGATTTAACAC 26 1311771 0.789320498 5 26 207 1 1.591064607 0.051282051 0.384615385 0.58974359 26 0 0 39 3L:1311723-1311794 6 22 2037 FBgn0035206 326.0766667 28.00666667 42.93333333 0.067468796 0.785527255 0.51242236 2 2 2 0.1 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3L 1318252 1318257 + 3L_1318252_1318257_+ 0.996155233 0.999999921 0.998077577 0.002718613 CG9153 FBtr0310555|FBtr0072671|FBtr0072670 1318000|1318000|1318000 1318330|1318330|1318330 3L + 1318160 1318278 3'utr CG9153 FlyBase G27049.1 AGTACAATGTCGTGTTATAGCTTTAAACTCTAGACTAGTTATTAATATCGCATTGTTATGGAGAGAAAGGAATTCAAGGAGGTAAATAAGGTTGGTGCATCAGTCTGAGGACAACAACA 91 1318259 0.823387251 18 77 567 0.85046729 1.959041392 0.196261682 0.164835165 0.289719626 91 16 0 91 3L:1318160-1318278 6 CG9153 FBtr0072670|FBtr0310555|FBtr0072671 1318000|1318000|1318000 1318330|1318330|1318330 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3L + 1318152 1318278 3'utr CG9153 FlyBase G20475.1 AATCAGCAAGTACAATGTCGTGTTATAGCTTTAAACTCTAGACTAGTTATTAATATCGCATTGTTATGGAGAGAAAGGAATTCAAGGAGGTAAATAAGGTTGGTGCATCAGTCTGAGGACAACAACA 51 1318258 0.975664576 16 46 295 0.891566265 1.86923172 0.168674699 0.490196078 0.686746988 51 9 0 74 3L:1318152-1318278 6 43 2038 FBgn0035207 1089.59 34.05 51.71333333 0.039464386 1.262848752 0.831507026 -7 -6 -6.5 0.1 dme-miR-988-3p 7mer-m8 ACAAGGG 3L 13278114 13278120 + 3L_13278114_13278120_+ 0.671522626 0.52211122 0.596816923 0.105649814 caps FBtr0075832|FBtr0075833|FBtr0305480 13277310|13277310|13278030 13279642|13279642|13279642 3L + 13278090 13278163 stop_codon caps FlyBase G29944.1 CGGATATCGAGCTGCATTACTTCTACAAGGGTTAAAGAGGAAACTTGAAAAGCAAGGGAATCGATCTAATTTAA 21 13278121 0.93786401 8 18 105 0.888888889 1.380211242 0.148148148 0.285714286 0.444444444 21 3 0 24 3L:13278090-13278163 7 caps FBtr0075832|FBtr0075833|FBtr0305480 13277310|13277310|13278030 13279642|13279642|13279642 ACAAGGG 7mer-m8 dme-miR-988-3p 3L + 13278097 13278162 stop_codon caps FlyBase G22664.1 CGAGCTGCATTACTTCTACAAGGGTTAAAGAGGAAACTTGAAAAGCAAGGGAATCGATCTAATTTA 12 13278135 0.962094551 4 9 49 0.722222222 1.113943352 0.055555556 0.5 0.666666667 12 5 0 13 3L:13278097-13278162 7 9 2039 FBgn0023095 209.6666667 5.27 8.083333333 0.042925278 1.707779886 1.113402062 -7 -21 -14 0.1 dme-bantam-3p 6mer3-8 TGATCT 3L 13278505 13278510 + 3L_13278505_13278510_+ 1 1 1 0 caps FBtr0075832|FBtr0075833|FBtr0305480|FBtr0346864 13277310|13277310|13278030|13278123 13279642|13279642|13279642|13279642 3L + 13278465 13278553 3'utr caps FlyBase G29946.1 ATTGACCATCCTGCTGATCGGCCATTTAATTTGCATACAGTGATCTTAATATTTAGGTTATGCTTAAAAGCAGTTCAATTATTGTAAAT 106 13278510 0.991625236 15 92 1002 0.893129771 1.46612587 0.022900763 0.20754717 0.358778626 106 11 3 117 3L:13278465-13278553 6 caps FBtr0075832|FBtr0075833|FBtr0305480|FBtr0346864 13277310|13277310|13278030|13278123 13279642|13279642|13279642|13279642 TGATCT 6mer3-8 dme-bantam-3p 3L + 13278465 13278529 3'utr caps FlyBase G22666.1 ATTGACCATCCTGCTGATCGGCCATTTAATTTGCATACAGTGATCTTAATATTTAGGTTATGCTT 59 13278509 0.69590373 11 53 502 0.896551724 1.591064607 0.034482759 0.322033898 0.540229885 59 8 1 78 3L:13278465-13278529 6 72 2040 FBgn0023095 209.6666667 5.27 8.083333333 0.343402226 13.66223909 8.907216495 -5 -4 -4.5 0.1 dme-bantam-3p 6mer2-7 GATCTC 3L 1333330 1333335 - 3L_1333330_1333335_- 0.999991431 0.941299123 0.970645277 0.041501723 CG2211 FBtr0331866|FBtr0072723 1333237|1333237 1333416|1333416 3L - 1333287 1333388 3'utr CG2211 FlyBase G33271.1 ATTCAAACAGCCATGTTAGTCCAAACTTTCATATGGTATAAACTCCCTATTAAGATCTCGTTAAAACCACTGAAGACTTGAAATACGTGTAGTGCACTCTAA 77 1333328 0.968417021 14 69 557 0.902173913 1.220108088 0.141304348 0.155844156 0.293478261 77 5 4 83 3L:1333287-1333388 6 CG2211 FBtr0331866|FBtr0072723 1333237|1333237 1333416|1333416 GATCTC 6mer2-7 dme-bantam-3p 3L - 1333294 1333365 3'utr CG2211 FlyBase G25174.2 AACTTTCATATGGTATAAACTCCCTATTAAGATCTCGTTAAAACCACTGAAGACTTGAAATACGTGTAGTGC 62 1333328 0.924516305 11 62 379 1 1.954242509 0.055555556 0.322580645 0.533333333 62 0 0 90 3L:1333294-1333365 6 53 2041 FBgn0035211 37.72 2.756666667 4.2 1.405090138 19.2261185 12.61904762 -7 -7 -7 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 13386376 13386381 - 3L_13386376_13386381_- 0.999981395 1 0.999990697 1.32E-05 CG10171 FBtr0075865|FBtr0075865|FBtr0075865|FBtr0075864|FBtr0075864|FBtr0075864 13385944|13385944|13385944|13386092|13386092|13386092 13386714|13386714|13386714|13386714|13386714|13386714 3L - 13386349 13386396 3'utr CG10171 FlyBase G36613.1 ATGACGTTGTTGTTACTGTGACTGTTCACCTCCATTTTGTGTATTAAC 16 13386372 0.98502915 6 16 130 1 1.301029996 0.5 0.1875 0.35 16 0 0 20 3L:13386349-13386396 6 CG10171 FBtr0075864|FBtr0075864|FBtr0075864|FBtr0075865|FBtr0075865|FBtr0075865 13386092|13386092|13386092|13385944|13385944|13385944 13386714|13386714|13386714|13386714|13386714|13386714 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 13386360 13386402 3'utr CG10171 FlyBase G27645.1 CGGATTATGACGTTGTTGTTACTGTGACTGTTCACCTCCATTT 17 13386373 0.700992705 6 16 151 1 1.447158031 0.428571429 0.411764706 0.642857143 17 0 0 28 3L:13386360-13386402 6 15 2042 FBgn0036353 70.39 4.823333333 7.333333333 0.213098451 3.109882516 2.045454545 -9 -8 -8.5 0.1 dme-miR-12-5p 6mer2-7 ATACTC 3L 13388457 13388462 - 3L_13388457_13388462_- 0.549988157 0.999101236 0.774544697 0.317570848 Poc1 FBtr0075863 13388297 13388629 3L - 13388441 13388512 stop_codon Poc1 FlyBase G36617.1 AGCAAACTATTGGACTCGATCGATGAGCGTGTGCGACGATTGGAGGGCATATACTCTTTATAGCCTTCTAAG 18 13388461 0.864732519 7 17 113 0.954545455 1.322219295 0.181818182 0.166666667 0.318181818 18 1 0 21 3L:13388441-13388512 6 Poc1 FBtr0075863 13388297 13388629 ATACTC 6mer2-7 dme-miR-12-5p 3L - 13388443 13388518 stop_codon Poc1 FlyBase G27648.1 GAGATCAGCAAACTATTGGACTCGATCGATGAGCGTGTGCGACGATTGGAGGGCATATACTCTTTATAGCCTTCTA 18 13388460 0.767730182 6 18 113 1 1.361727836 0.260869565 0.277777778 0.434782609 18 0 0 23 3L:13388443-13388518 6 8.5 2043 FBgn0036354 422.6533333 31.14666667 47.30333333 0.020111045 0.272902397 0.179691354 -1 -2 -1.5 0.1 dme-miR-79-3p 6mer3-8 TAGCTT 3L 1339523 1339528 - 3L_1339523_1339528_- 0.99978654 0.999786778 0.999786659 2.12E-07 CG2199 FBtr0331865|FBtr0072722|FBtr0072721 1339458|1339458|1339458 1339821|1339821|1339821 3L - 1339468 1339598 3'utr CG2199 FlyBase G33274.1 AATTTGTATATTAAGACTTTATTATAACCGCATTGGTTACACCACTTGTACTCACCAAGAGTATATAAATTAGCTTGAATGTAATAAACATATTTGTACTGAGCGATGAACTGTTAATAAAAAATGGCAAA 72 1339529 0.78691201 14 71 509 1 1.973127854 0.106382979 0.180555556 0.372340426 72 0 0 94 3L:1339468-1339598 6 CG2199 FBtr0072721|FBtr0331865|FBtr0072722 1339458|1339458|1339458 1339821|1339821|1339821 TAGCTT 6mer3-8 dme-miR-79-3p 3L - 1339469 1339563 3'utr CG2199 FlyBase G25178.1 GTTACACCACTTGTACTCACCAAGAGTATATAAATTAGCTTGAATGTAATAAACATATTTGTACTGAGCGATGAACTGTTAATAAAAAATGGCAA 51 1339529 0.881639837 9 50 342 0.986666667 1.86923172 0.133333333 0.352941176 0.56 51 1 0 74 3L:1339469-1339563 6 39 2044 FBgn0035213 1503.256667 70.66666667 108.9133333 0.025943673 0.551886792 0.358082879 1 1 1 0.1 dme-miR-14-3p 7mer-A1 AGACTGA 3L 1343903 1343909 - 3L_1343903_1343909_- 0.823346802 0.823336465 0.823341634 7.28E-06 Ptp61F FBtr0072719|FBtr0310161 1342717|1342717 1344327|1344327 3L - 1343886 1343951 3'utr Ptp61F FlyBase G33294.1 AAAATCGGGTAGAAATCACGTCAAATGTAGATTTTGCGCAATAGACTGACATTTTAGATCAAATTT 59 1343910 0.982685905 9 58 433 0.986486486 1.562292864 0.135135135 0.203389831 0.364864865 59 0 1 73 3L:1343886-1343951 7 Ptp61F FBtr0310161|FBtr0072719 1342717|1342717 1344327|1344327 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 1343886 1343929 3'utr Ptp61F FlyBase G25190.1 AAATGTAGATTTTGCGCAATAGACTGACATTTTAGATCAAATTT 34 1343910 0.923139298 3 31 223 0.88 1.342422681 0.22 0.323529412 0.54 34 5 1 44 3L:1343886-1343929 7 45.5 2045 FBgn0267487 1392.83 58.80666667 89.87333333 0.032667303 0.7737218 0.506268081 1 1 1 0.1 dme-miR-1007-3p 6mer3-8 TGAGCT 3L 1344063 1344068 - 3L_1344063_1344068_- 0.999943918 0.999866478 0.999905198 5.47E-05 Ptp61F FBtr0072719|FBtr0310161|FBtr0072718 1342717|1342717|1343981 1344327|1344327|1344327 3L - 1344034 1344092 3'utr Ptp61F FlyBase G33295.1 ACGAATTGCGGATGGCGGATTGATTGAGCTGAACGAACGATACAAGATGCATAAATATT 9 1344069 0.961517269 4 9 48 1 1.146128036 0.142857143 0.333333333 0.571428571 9 0 0 14 3L:1344034-1344092 6 Ptp61F FBtr0310161|FBtr0072718|FBtr0072719 1342717|1343981|1342717 1344327|1344327|1344327 TGAGCT 6mer3-8 dme-miR-1007-3p 3L - 1344030 1344081 3'utr Ptp61F FlyBase G25191.1 ATGGCGGATTGATTGAGCTGAACGAACGATACAAGATGCATAAATATTAGGG 6 1344069 0.961935594 4 5 26 0.857142857 0.77815125 0 0.166666667 0.285714286 6 1 0 6 3L:1344030-1344081 6 5.5 2046 FBgn0267487 1392.83 58.80666667 89.87333333 0.003948795 0.093526811 0.061197241 1 1 1 0.1 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 13483952 13483958 - 3L_13483952_13483958_- 0.546430599 0.638149495 0.592290047 0.064855056 Abp1 FBtr0075819 13483531 13484013 3L - 13483912 13483975 3'utr Abp1 FlyBase G36640.1 TAAATATCTACACCAATGCAGCTAGCAACTATATTTTGGATCCGGACTATAGCTACTTAAACAC 81 13483959 0.925631323 11 71 322 0.916666667 1.643452676 0.020833333 0.1875 0.322916667 80 7 1 88 3L:13483912-13483975 7 Abp1 FBtr0075819 13483531 13484013 GCAGCTA 7mer-A1 dme-miR-980-3p 3L - 13483936 13483990 3'utr Abp1 FlyBase G27663.2 GGGACGCCCTTTTGCTAAATATCTACACCAATGCAGCTAGCAACTATATTTTGGA 48 13483959 0.948217751 5 42 176 0.913580247 1.170261715 0.012345679 0.5 0.703703704 48 3 4 74 3L:13483936-13483990 7 53 2047 FBgn0036372 618.6666667 30.00333333 45.8 0.085668103 1.766470392 1.15720524 1 1 1 0.1 dme-miR-283-5p 8mer-A1 TGATATTA 3L 13509895 13509902 + 3L_13509895_13509902_+ 0.592189442 0.592190316 0.592189879 6.36E-07 Spt20 FBtr0340705|FBtr0304904|FBtr0075812 13509797|13508879|13509797 13510695|13510695|13511541 3L + 13509871 13509914 3'utr Spt20 FlyBase G30001.1 GAAGGCTACGCGTTGTGTATTGCTTGATATTATAGTTTATGGTT 8 13509894 0.98605216 4 8 95 1 1 0 0.25 0.4 8 0 0 10 3L:13509871-13509914 8 Spt20 FBtr0075812|FBtr0304904|FBtr0340705 13509797|13508879|13509797 13511541|13510695|13510695 TGATATTA 8mer-A1 dme-miR-283-5p 3L + 13509837 13509912 3'utr Spt20 FlyBase G22707.1 CGACTGAGAGATGAAGCTATAGAGCGAACAAGTAGAAGGCTACGCGTTGTGTATTGCTTGATATTATAGTTTATGG 16 13509893 0.942297423 6 12 110 0.761904762 0.903089987 0.380952381 0.3125 0.476190476 16 4 1 16 3L:13509837-13509912 8 8 2048 FBgn0036374 444.0733333 7.2 11.05666667 0.018015043 1.111111111 0.723545372 1 2 1.5 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT 3L 13510012 13510018 + 3L_13510012_13510018_+ 0.658987947 0.658989335 0.658988641 9.90E-07 Spt20 FBtr0340705|FBtr0304904|FBtr0075812 13509797|13508879|13509797 13510695|13510695|13511541 3L + 13509944 13510036 3'utr Spt20 FlyBase G30002.1 TGTATACCCATATAACTATATATGTTTTGATGTGTAATCGTAAGTGTAAATTGCATGGGCAACAGCATGGCAGCTCATAGTTGTGCAACCTAG 292 13510011 0.982357188 8 289 1074 0.991689751 2.553883027 0.318559557 0.178082192 0.335180055 292 3 0 358 3L:13509944-13510036 7 Spt20 FBtr0075812|FBtr0304904|FBtr0340705 13509797|13508879|13509797 13511541|13510695|13510695 GGCAGCT 7mer-m8 dme-miR-980-3p 3L + 13509990 13510036 3'utr Spt20 FlyBase G22708.1 TAAATTGCATGGGCAACAGCATGGCAGCTCATAGTTGTGCAACCTAG 185 13510011 0.973260255 5 181 622 0.982758621 2.45484486 0.437931034 0.358695652 0.593103448 184 5 0 285 3L:13509990-13510036 7 235 2049 FBgn0036374 444.0733333 7.2 11.05666667 0.529191875 32.63888889 21.25414531 1 1 1 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3L 13511094 13511100 + 3L_13511094_13511100_+ 0.428942234 0.443015707 0.435978971 0.009951467 Spt20 FBtr0075812 13509797 13511541 3L + 13511082 13511107 3'utr Spt20 FlyBase G30005.1 TTAATTAATAAATGTGATTTAAGATG 9 13511100 0.780936964 2 9 63 1 1.079181246 0.583333333 0.222222222 0.416666667 9 0 0 12 3L:13511082-13511107 7 Spt20 FBtr0075812 13509797 13511541 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 13511072 13511110 3'utr Spt20 FlyBase G22709.1 AATGTTAATATTAATTAATAAATGTGATTTAAGATGAAT 8 13511100 0.981519195 3 8 67 1 1.041392685 0.454545455 0.375 0.545454545 8 0 0 11 3L:13511072-13511110 7 8.5 2050 FBgn0036374 444.0733333 7.2 11.05666667 0.019140983 1.180555556 0.768766958 -6 -6 -6 0.1 dme-miR-34-5p 7mer-A1 ACTGCCA 3L 13515854 13515860 + 3L_13515854_13515860_+ 0.823349561 0.823349415 0.823349488 1.41E-07 Liprin-beta FBtr0075813|FBtr0330342|FBtr0075814 13515759|13515759|13515759 13516276|13516276|13516276 3L + 13515770 13515875 3'utr Liprin-beta FlyBase G30022.1 CGAAAGGAGCACAAATCGATTGAAAGCAAATATGTTTTTTAGTTGTAAGCCCAAAACCTGGCCAAGGATCCCCAAACTGAATGAACTGCCACCTGAACCAATTATG 59 13515851 0.973035859 16 53 319 0.918918919 1.832508913 0.324324324 0.186440678 0.351351351 59 6 0 68 3L:13515770-13515875 7 Liprin-beta FBtr0330342|FBtr0075814|FBtr0075813 13515759|13515759|13515759 13516276|13516276|13516276 ACTGCCA 7mer-A1 dme-miR-34-5p 3L + 13515771 13515868 3'utr Liprin-beta FlyBase G22720.1 GAAAGGAGCACAAATCGATTGAAAGCAAATATGTTTTTTAGTTGTAAGCCCAAAACCTGGCCAAGGATCCCCAAACTGAATGAACTGCCACCTGAACC 43 13515851 0.975870382 9 38 237 0.892307692 1.763427994 0.307692308 0.325581395 0.553846154 43 7 0 58 3L:13515771-13515868 7 27.5 2051 FBgn0036376 801.8733333 34.78666667 53.21666667 0.034294693 0.790532771 0.516755402 3 3 3 0.1 dme-miR-980-5p 8mer-A1 GAAAAACA 3L 1352108 1352115 + 3L_1352108_1352115_+ 0.639848975 0.639875932 0.639862453 1.90E-05 CG9166 FBtr0072680 1352030 1352853 3L + 1352079 1352110 3'utr CG9166 FlyBase G27073.1 ACGTGCGAGATCACTTGCAGTGTGATTTGGAA 19 1352105 0.781300346 2 18 126 0.962962963 1.414973348 0.222222222 0.210526316 0.444444444 19 1 0 26 3L:1352079-1352110 3 CG9166 FBtr0072680 1352030 1352853 GAAAAACA 8mer-A1 dme-miR-980-5p 3L + 1352080 1352110 3'utr CG9166 FlyBase G20493.1 CGTGCGAGATCACTTGCAGTGTGATTTGGAA 11 1352106 0.791903675 3 11 71 1 1.230448921 0.411764706 0.454545455 0.647058824 11 0 0 17 3L:1352080-1352110 3 13.5 2052 FBgn0029514 63.66666667 7.47 11.33666667 0.212041885 1.807228916 1.190826228 3 2 2.5 0.1 dme-miR-283-5p 8mer-m1 TGATATTT 3L 13907432 13907439 - 3L_13907432_13907439_- 0.555215851 0.555271275 0.555243563 3.92E-05 Rgl FBtr0075793|FBtr0330186|FBtr0075794|FBtr0075796|FBtr0075795 13906895|13906895|13906895|13906895|13906895 13907823|13907766|13907823|13907823|13907823 3L - 13907423 13907471 3'utr Rgl FlyBase G36656.1 ATATTATACAGAGACTCTACTGGAATATTTGCTGATATTTACAAACACA 17 13907443 0.73279272 5 16 145 0.952380952 1.301029996 0.19047619 0.235294118 0.380952381 17 1 0 20 3L:13907423-13907471 8 Rgl FBtr0075795|FBtr0075794|FBtr0075796|FBtr0075793|FBtr0330186 13906895|13906895|13906895|13906895|13906895 13907823|13907823|13907823|13907823|13907766 TGATATTT 8mer-m1 dme-miR-283-5p 3L - 13907404 13907463 3'utr Rgl FlyBase G27670.1 CAGAGACTCTACTGGAATATTTGCTGATATTTACAAACACACATATACATTAAGTATATT 16 13907443 0.989560777 5 15 145 0.909090909 1.301029996 0.090909091 0.3125 0.5 16 2 0 20 3L:13907404-13907463 8 13.5 2053 FBgn0026376 1692.026667 44.63666667 68.24666667 0.007978598 0.302441939 0.197811859 4 4 4 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 3L 13907715 13907720 - 3L_13907715_13907720_- 0.773571999 0.999253757 0.886412878 0.159581131 Rgl FBtr0075793|FBtr0330186|FBtr0075794|FBtr0075796|FBtr0075795 13906895|13906895|13906895|13906895|13906895 13907823|13907766|13907823|13907823|13907823 3L - 13907670 13907780 stop_codon Rgl FlyBase G36657.1 AGGGCGAGGAGTGAGGGTTAAGGATTATACATTGGGGGGGAAATTGTAAATAGCTAGAGCTTGACTCGCCCATGACAAAACTGGATAAACCAATTTCTATTTAGGTTCGTA 15 13907718 0.962173523 10 15 80 1 1.204119983 0 0.066666667 0.125 15 0 0 16 3L:13907670-13907780 6 Rgl FBtr0075795|FBtr0075794|FBtr0075796|FBtr0075793|FBtr0330186 13906895|13906895|13906895|13906895|13906895 13907823|13907823|13907823|13907823|13907766 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 13907657 13907732 3'utr Rgl FlyBase G27671.1 AATAGCTAGAGCTTGACTCGCCCATGACAAAACTGGATAAACCAATTTCTATTTAGGTTCGTAACTCGTTTAAGTT 13 13907719 0.985001649 7 10 87 0.6875 1.041392685 0 0.230769231 0.375 13 5 0 11 3L:13907657-13907732 6 8 2054 FBgn0026376 1692.026667 44.63666667 68.24666667 0.004728058 0.179224853 0.117221842 -2 -1 -1.5 0.1 dme-miR-11-3p 8mer-m1 CTGTGATG 3L 13934344 13934351 + 3L_13934344_13934351_+ 0.462183361 0.462095616 0.462139488 6.21E-05 Gl FBtr0075756 13934192 13934656 3L + 13934314 13934361 3'utr Gl FlyBase G30055.1 AATAACACAGCTCCTCAAGACTCCCTGCTCCTGTGATGTGACCTAAAC 102 13934341 0.696635919 10 99 772 0.956521739 1.740362689 0.113043478 0.117647059 0.217391304 102 4 1 110 3L:13934314-13934361 8 Gl FBtr0075756 13934192 13934656 CTGTGATG 8mer-m1 dme-miR-11-3p 3L + 13934316 13934361 3'utr Gl FlyBase G22738.1 TAACACAGCTCCTCAAGACTCCCTGCTCCTGTGATGTGACCTAAAC 51 13934342 0.670338775 6 46 368 0.921052632 1.367976785 0.118421053 0.352941176 0.565789474 51 4 2 70 3L:13934316-13934361 8 75 2055 FBgn0001108 959.94 25.44 38.93 0.078129883 2.948113208 1.926534806 3 2 2.5 0.1 dme-miR-980-5p 7mer-A1 AAAAACA 3L 13997983 13997989 + 3L_13997983_13997989_+ 0.782911782 0.782911504 0.782911643 2.12E-07 CG17361 FBtr0075767 13997837 13998055 3L + 13997957 13998041 3'utr CG17361 FlyBase G30098.1 TGAAAGTACATATGGAGTGTAGTTTTAAAAACAATTTCATGTTCTCATATTGACAATAAGATAATAAAGAAATGATAATCGGATC 46 13997995 0.990520245 13 41 413 0.883333333 1.72427587 0.3 0.217391304 0.4 46 7 0 53 3L:13997957-13998041 7 CG17361 FBtr0075767 13997837 13998055 AAAAACA 7mer-A1 dme-miR-980-5p 3L + 13997915 13998019 3'utr CG17361 FlyBase G22765.1 TTCGATATATTTTTAAAGTAGAAACAAGTTAGCGACTAATAATGAAAGTACATATGGAGTGTAGTTTTAAAAACAATTTCATGTTCTCATATTGACAATAAGATA 38 13997995 0.96893913 14 34 345 0.921568627 1.371067862 0.235294118 0.289473684 0.470588235 38 3 1 47 3L:13997915-13998019 7 31 2056 FBgn0036395 38.90333333 5.8 9.033333333 0.796846885 5.344827586 3.431734317 -12 -12 -12 0.1 dme-miR-965-3p 7mer-m8 TACGCTT 3L 13999609 13999615 - 3L_13999609_13999615_- 0.620204739 0.620204727 0.620204733 0 CG8783 FBtr0333025|FBtr0075786|FBtr0075785 13999378|13999378|13999378 13999734|13999734|13999734 3L - 13999592 13999638 3'utr CG8783 FlyBase G36691.1 AAAGTTTGCGAAGCAAATCAATTTACGCTTGTAGACTACATATTTTG 142 13999616 0.758056456 6 142 1141 1 2.201397124 0.213836478 0.105633803 0.201257862 142 0 0 159 3L:13999592-13999638 7 CG8783 FBtr0075786|FBtr0075785|FBtr0333025 13999378|13999378|13999378 13999734|13999734|13999734 TACGCTT 7mer-m8 dme-miR-965-3p 3L - 13999595 13999639 3'utr CG8783 FlyBase G27698.1 TAAAGTTTGCGAAGCAAATCAATTTACGCTTGTAGACTACATATT 82 13999616 0.75354898 5 81 636 0.992248062 2.10720997 0.317829457 0.390243902 0.612403101 82 1 0 128 3L:13999595-13999639 7 112 2057 FBgn0036397 101 5.286666667 8.043333333 1.108910891 21.18537201 13.92457522 1 1 1 0.1 dme-miR-184-5p 6mer3-8 TGATAA 3L 14018034 14018039 + 3L_14018034_14018039_+ 0.998519629 0.999955111 0.99923737 0.001015052 upSET FBtr0075768|FBtr0333050 14017876|14017876 14020148|14020148 3L + 14017973 14018048 3'utr upSET FlyBase G30151.1 AAAGTAATACAGCTTCATACAAAGGCCGCTTTATTGCAGGTTGATTCAAATTTTATGTATCTGATAATAGCTAACC 16 14018028 0.990966598 5 14 146 0.869565217 1.301029996 0.173913043 0.25 0.47826087 16 3 0 20 3L:14017973-14018048 6 upSET FBtr0333050|FBtr0075768 14017876|14017876 14020148|14020148 TGATAA 6mer3-8 dme-miR-184-5p 3L + 14018007 14018055 3'utr upSET FlyBase G22801.1 TGCAGGTTGATTCAAATTTTATGTATCTGATAATAGCTAACCGGTACCA 7 14018028 0.965348333 4 7 75 1 1 0 0.285714286 0.5 7 0 0 10 3L:14018007-14018055 6 9.5 2058 FBgn0036398 2404.643333 22.86666667 35.16333333 0.00395069 0.415451895 0.270167788 6 6 6 0.1 dme-miR-968-5p 7mer-A1 CTACTTA 3L 14018334 14018340 + 3L_14018334_14018340_+ 0.499534136 0.643041796 0.571287966 0.101475268 upSET FBtr0075768|FBtr0333050 14017876|14017876 14020148|14020148 3L + 14018309 14018421 3'utr upSET FlyBase G30154.1 TGTCACAGCAATCAAACCGCTTAACCTACTTATAAACAAGGAACCTACAATATATATATATGCACATGTATATGCTAGACACCTTTAAATAGAGCCTATGTAGCGCGATATAA 25 14018338 0.888485288 13 25 135 1 1.51851394 0.090909091 0.16 0.363636364 25 0 0 33 3L:14018309-14018421 7 upSET FBtr0333050|FBtr0075768 14017876|14017876 14020148|14020148 CTACTTA 7mer-A1 dme-miR-968-5p 3L + 14018308 14018345 3'utr upSET FlyBase G22803.1 ATGTCACAGCAATCAAACCGCTTAACCTACTTATAAAC 12 14018320 0.912550699 5 9 62 0.8125 0.636822098 0 0.166666667 0.375 12 1 2 13 3L:14018308-14018345 7 10.5 2059 FBgn0036398 2404.643333 22.86666667 35.16333333 0.004366552 0.459183673 0.298606503 -4 14 5 0.1 dme-miR-282-5p 6mer3-8 AGAGGC 3L 14019021 14019026 + 3L_14019021_14019026_+ 0.994987934 0.995700201 0.995344068 0.000503672 upSET FBtr0075768|FBtr0333050 14017876|14017876 14020148|14020148 3L + 14018767 14019122 3'utr upSET FlyBase G30159.1 ATTTAAAACACATTACCTAGTACAGAACTTGGCAAATAATACAAACTGTAATTGTTAGAGAGACCAGCGAAAACAAAATCCGGAACTAACAAAATTGTAAATAATATTTTTAAAACCCAAACATGAGCAACCAAAAGGATGAAAGTAAAAACTACTTGTCTTATTAAGCAAGTTAGTTAAGTAAGTTAAAAAGAGTACAAAGCGAGGGTTAATTGATTGAAATTATGCTAATGGATCGCATTAAAATTGTAAATAGAGGCAGCAACAGAAAGTGTCCGTAGCCATTTTCGTATATAGGCTTAATTATTTTAATCTTTCGAATTTCGTCTAAAGTAAAATATTCACAAATTAATTGT 108 14019019 0.9727426 37 100 601 0.932835821 2.096910013 0.186567164 0.175925926 0.335820896 108 9 0 125 3L:14018767-14019122 6 upSET FBtr0333050|FBtr0075768 14017876|14017876 14020148|14020148 AGAGGC 6mer3-8 dme-miR-282-5p 3L + 14018846 14019047 3'utr upSET FlyBase G22808.1 CCGGAACTAACAAAATTGTAAATAATATTTTTAAAACCCAAACATGAGCAACCAAAAGGATGAAAGTAAAAACTACTTGTCTTATTAAGCAAGTTAGTTAAGTAAGTTAAAAAGAGTACAAAGCGAGGGTTAATTGATTGAAATTATGCTAATGGATCGCATTAAAATTGTAAATAGAGGCAGCAACAGAAAGTGTCCGTAG 51 14019019 0.974266107 18 40 212 0.911392405 1.556302501 0.164556962 0.431372549 0.632911392 51 6 1 72 3L:14018846-14019047 6 21.5 2060 FBgn0036398 2404.643333 22.86666667 35.16333333 0.008941035 0.940233236 0.611432363 2 2 2 0.1 dme-miR-79-3p 6mer3-8 TAGCTT 3L 14019144 14019149 + 3L_14019144_14019149_+ 0.999238608 0.991394249 0.995316428 0.005546828 upSET FBtr0075768|FBtr0333050 14017876|14017876 14020148|14020148 3L + 14019124 14019209 3'utr upSET FlyBase G30160.1 ACATTAATTTGTTTAATACATAGCTTGTCATTAGACTTAGATCAAGATTTTATTCAGATCAATGCTCACCGAGGAATGTGCCACAA 37 14019155 0.990023079 11 33 320 0.904761905 1.579783597 0.023809524 0.135135135 0.238095238 37 4 0 38 3L:14019124-14019209 6 upSET FBtr0333050|FBtr0075768 14017876|14017876 14020148|14020148 TAGCTT 6mer3-8 dme-miR-79-3p 3L + 14019137 14019168 3'utr upSET FlyBase G22809.1 TAATACATAGCTTGTCATTAGACTTAGATCAA 21 14019154 0.711879998 5 17 173 0.848484848 1.146128036 0 0.333333333 0.575757576 21 4 1 28 3L:14019137-14019168 6 26.5 2061 FBgn0036398 2404.643333 22.86666667 35.16333333 0.011020345 1.158892128 0.753625936 -11 -10 -10.5 0.1 dme-miR-980-5p 7mer-A1 AAAAACA 3L 14019481 14019487 + 3L_14019481_14019487_+ 0.497188064 0.670802639 0.583995352 0.12276399 upSET FBtr0075768|FBtr0333050 14017876|14017876 14020148|14020148 3L + 14019386 14019494 3'utr upSET FlyBase G30161.1 AGAAAGAAACTCATTTATGGACCCTGTGAAAAATGATCTATTATTGATTCAGATAGTCTTTGTTACGGATAACAAACTGGACAAAACATGCTGTAAAAAACATAAGTTG 74 14019474 0.944437177 12 73 433 0.987341772 1.892094603 0.063291139 0.067567568 0.126582278 74 1 0 78 3L:14019386-14019494 7 upSET FBtr0333050|FBtr0075768 14017876|14017876 14020148|14020148 AAAAACA 7mer-A1 dme-miR-980-5p 3L + 14019451 14019488 3'utr upSET FlyBase G22812.1 CGGATAACAAACTGGACAAAACATGCTGTAAAAAACAT 27 14019474 0.884103399 3 27 74 1 1.602059991 0 0.37037037 0.575 27 0 0 40 3L:14019451-14019488 7 28 2062 FBgn0036398 2404.643333 22.86666667 35.16333333 0.011644138 1.224489796 0.796284008 7 7 7 0.1 dme-miR-970-3p 8mer-A1 TCTTATGA 3L 14021058 14021065 - 3L_14021058_14021065_- 0.630776534 0.630609504 0.630693019 0.000118087 ptip FBtr0075784 14020313 14021220 3L - 14020930 14021106 3'utr ptip FlyBase G36703.1 CGCAATGTCATTGGCCATTGATGTTGTAGGCCGCGCCAATTTCTTATGATATACCAACGCGAAACTAGTCCATAGAGTTCGTCAATTCAATCGGGCATGCCGGAACGAATGAGTTTATAGGGTCTCGGGCACATCGGCATATCGGTCACAGCTAGACAAATTTATTGCATCCCCCTA 82 14021066 0.981844784 15 79 588 0.956521739 1.944482672 0.358695652 0.109756098 0.206521739 82 4 0 88 3L:14020930-14021106 8 ptip FBtr0075784 14020313 14021220 TCTTATGA 8mer-A1 dme-miR-970-3p 3L - 14020997 14021088 3'utr ptip FlyBase G27705.1 TGATGTTGTAGGCCGCGCCAATTTCTTATGATATACCAACGCGAAACTAGTCCATAGAGTTCGTCAATTCAATCGGGCATGCCGGAACGAAT 32 14021066 0.999759654 7 31 195 0.955555556 1.633468456 0.177777778 0.28125 0.488888889 32 2 0 43 3L:14020997-14021088 8 40 2063 FBgn0052133 645.9666667 9.623333333 14.77 0.0619227 4.156563907 2.708192282 1 1 1 0.1 dme-miR-92b-3p 6mer2-7 TGCAAT 3L 14034051 14034056 + 3L_14034051_14034056_+ 0.752589823 0.585153422 0.668871623 0.118395414 CG6650 FBtr0075769|FBtr0304672|FBtr0343100 14033995|14033995|14033995 14034640|14034640|14034909 3L + 14033968 14034169 stop_codon CG6650 FlyBase G30174.1 CTGCCTCCGGACTCGCGGCACAGTTGTAGGATCGGCTATCACAATGGGACAGGCAAAGACTGCATAGTATTTCACTAGAAACCTGCAATGAAAGACTCGAATAGAAGGCCAGGACGAAACCCCGATGCATTCCCCCGCTGGATGGACATGAACTCGGCATGTTTAGCACCTTAGTGACCTTAGAAACGCGTTACCTTCACAC 165 14034032 0.952965366 23 147 648 0.897297297 1.178715403 0.178378378 0.096969697 0.194594595 165 9 10 166 3L:14033968-14034169 6 CG6650 FBtr0343100|FBtr0075769|FBtr0304672 14033995|14033995|14033995 14034909|14034640|14034640 TGCAAT 6mer2-7 dme-miR-92b-3p 3L + 14033963 14034171 stop_codon CG6650 FlyBase G22821.1 CATCTCTGCCTCCGGACTCGCGGCACAGTTGTAGGATCGGCTATCACAATGGGACAGGCAAAGACTGCATAGTATTTCACTAGAAACCTGCAATGAAAGACTCGAATAGAAGGCCAGGACGAAACCCCGATGCATTCCCCCGCTGGATGGACATGAACTCGGCATGTTTAGCACCTTAGTGACCTTAGAAACGCGTTACCTTCACACAA 86 14034032 0.946291426 22 77 314 0.875968992 1.149988456 0.147286822 0.418604651 0.612403101 86 9 7 113 3L:14033963-14034171 6 38 2064 FBgn0036402 661.0066667 31.6 48.21 0.057488074 1.202531646 0.788218212 19 19 19 0.1 dme-miR-33-5p 7mer-A1 AATGCAA 3L 14034323 14034329 + 3L_14034323_14034329_+ 0.78290763 0.648381044 0.715644337 0.095124671 CG6650 FBtr0075769|FBtr0304672|FBtr0343100 14033995|14033995|14033995 14034640|14034640|14034909 3L + 14034293 14034376 3'utr CG6650 FlyBase G30176.1 CGTAAATTCCACGTGTTCAAAATTATTCCTAATGCAACAGCATCGAAACTCGGAAACGAATGTCACCTAGTCCTAAGTTATGTT 27 14034316 0.967944191 9 23 176 0.84375 0.829303773 0.09375 0.148148148 0.28125 27 2 3 27 3L:14034293-14034376 7 CG6650 FBtr0343100|FBtr0075769|FBtr0304672 14033995|14033995|14033995 14034909|14034640|14034640 AATGCAA 7mer-A1 dme-miR-33-5p 3L + 14034305 14034371 3'utr CG6650 FlyBase G22822.1 GTGTTCAAAATTATTCCTAATGCAACAGCATCGAAACTCGGAAACGAATGTCACCTAGTCCTAAGTT 18 14034315 0.752093872 5 14 117 0.814814815 0.740362689 0.037037037 0.444444444 0.62962963 18 2 3 22 3L:14034305-14034371 7 12 2065 FBgn0036402 661.0066667 31.6 48.21 0.018154129 0.379746835 0.248911014 7 8 7.5 0.1 dme-bantam-3p 7mer-A1 GATCTCA 3L 14052405 14052411 + 3L_14052405_14052411_+ 0.821743647 0.822413023 0.822078335 0.000473337 CG6833 FBtr0302433|FBtr0075774 14052207|14052207 14052469|14052469 3L + 14052392 14052422 3'utr CG6833 FlyBase G30205.1 AAAAGCAGGCTCGGATCTCATGATGAAACCA 17 14052412 0.680372651 3 15 65 0.954545455 1.322219295 0.181818182 0.235294118 0.409090909 17 1 0 21 3L:14052392-14052422 7 CG6833 FBtr0302433|FBtr0075774 14052207|14052207 14052469|14052469 GATCTCA 7mer-A1 dme-bantam-3p 3L + 14052393 14052420 3'utr CG6833 FlyBase G22843.1 AAAGCAGGCTCGGATCTCATGATGAAAC 19 14052412 0.65185109 2 19 71 1 1.397940009 0.32 0.315789474 0.48 19 0 0 25 3L:14052393-14052420 7 18 2066 FBgn0036405 208.48 21.87 33.59 0.086339217 0.823045267 0.535873772 -7 -7 -7 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3L 14070252 14070258 + 3L_14070252_14070258_+ 0.440845304 0.440934995 0.440890149 6.34E-05 CG32138 FBtr0075776|FBtr0075775|FBtr0114573|FBtr0334053 14070133|14070133|14070133|14069144 14070369|14070369|14071583|14070369 3L + 14070143 14070329 3'utr CG32138 FlyBase G30241.1 ACGAGATAGAGATCGACGCAATGACGACGACGGGGCAATGGCAACGAATCGAAAATCAAAATTCACACTGAAACCGAAACAAAAAGAGAACATTACAGATACTGCAATATGTGATTAGGCGATTAAATTGTTTTCGAGACACTCTTACACATACACAAATTCACATTCCCTTTTATGCAAATCCTTA 3892 14070258 0.983714556 28 3721 28137 0.96001729 2.267367313 0.208126216 0.156731757 0.290685109 3892 162 23 4442 3L:14070143-14070329 7 CG32138 FBtr0334053|FBtr0114573|FBtr0075775|FBtr0075776 14069144|14070133|14070133|14070133 14070369|14071583|14070369|14070369 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 14070144 14070333 3'utr CG32138 FlyBase G22873.1 CGAGATAGAGATCGACGCAATGACGACGACGGGGCAATGGCAACGAATCGAAAATCAAAATTCACACTGAAACCGAAACAAAAAGAGAACATTACAGATACTGCAATATGTGATTAGGCGATTAAATTGTTTTCGAGACACTCTTACACATACACAAATTCACATTCCCTTTTATGCAAATCCTTATATT 2356 14070258 0.980988992 30 2208 16293 0.943160691 2.152410664 0.225232404 0.40959253 0.630544489 2356 190 24 3551 3L:14070144-14070333 7 2967 2067 FBgn0267795 5755.37 129.1033333 198.11 0.515518551 22.98159097 14.97652819 -6 -6 -6 0.1 dme-miR-986-5p 6mer3-8 ATTCGA 3L 14070560 14070565 + 3L_14070560_14070565_+ 0.858193973 0.759997896 0.809095934 0.069435128 CG32138 FBtr0114573 14070133 14071583 3L + 14070546 14070586 3'utr CG32138 FlyBase G30243.1 AGTTGAACTTGAAAATTCGAATGGTGTATTTATCAAATCTT 50 14070567 0.802248191 8 45 418 0.918032787 1.748188027 0.016393443 0.22 0.360655738 50 5 0 56 3L:14070546-14070586 6 CG32138 FBtr0114573 14070133 14071583 ATTCGA 6mer3-8 dme-miR-986-5p 3L + 14070545 14070586 3'utr CG32138 FlyBase G22875.1 AAGTTGAACTTGAAAATTCGAATGGTGTATTTATCAAATCTT 43 14070567 0.815548041 4 41 358 0.928571429 1.812913357 0.085714286 0.441860465 0.657142857 43 5 0 65 3L:14070545-14070586 6 44.5 2068 FBgn0267795 5755.37 129.1033333 198.11 0.00773191 0.344685136 0.224622684 -7 -7 -7 0.1 dme-miR-12-5p 6mer3-8 AATACT 3L 14070706 14070711 + 3L_14070706_14070711_+ 0.999994929 0.997925926 0.998960427 0.001463004 CG32138 FBtr0114573 14070133 14071583 3L + 14070612 14070737 3'utr CG32138 FlyBase G30244.1 TTACCCTGTGTACATACATATACTTACATATATATCAAATTATATATGTGCTATTTAATTATATTTTTTAAACTTACGTTTTAACCAAATACGAAATACTTGCTGCATCCATCCGAGATGGCAAAT 41 14070711 0.981452416 19 37 302 0.921568627 0.973127854 0.098039216 0.219512195 0.37254902 41 0 4 47 3L:14070612-14070737 6 CG32138 FBtr0114573 14070133 14071583 AATACT 6mer3-8 dme-miR-12-5p 3L + 14070612 14070734 3'utr CG32138 FlyBase G22876.1 TTACCCTGTGTACATACATATACTTACATATATATCAAATTATATATGTGCTATTTAATTATATTTTTTAAACTTACGTTTTAACCAAATACGAAATACTTGCTGCATCCATCCGAGATGGCA 18 14070711 0.988648262 10 15 134 0.846153846 0.740362689 0 0.277777778 0.5 18 1 3 22 3L:14070612-14070734 6 13.5 2069 FBgn0267795 5755.37 129.1033333 198.11 0.002345635 0.104567401 0.06814396 -5 -5 -5 0.1 dme-miR-932-5p 6mer2-7 GAATTG 3L 14070817 14070822 + 3L_14070817_14070822_+ 0.999999938 0.999993934 0.999996936 4.24E-06 CG32138 FBtr0114573 14070133 14071583 3L + 14070770 14070855 3'utr CG32138 FlyBase G30245.1 TCCGAATTTTAATTAATTTTATGAAATTAGTAAGTCAAATAAGCATTGAATTGTATGAGAAGAGAGTAAAACGCATTAAACTTTTG 30 14070820 0.977059685 12 28 179 0.971428571 1.531478917 0.485714286 0.1 0.228571429 30 1 0 34 3L:14070770-14070855 6 CG32138 FBtr0114573 14070133 14071583 GAATTG 6mer2-7 dme-miR-932-5p 3L + 14070798 14070836 3'utr CG32138 FlyBase G22877.1 AGTAAGTCAAATAAGCATTGAATTGTATGAGAAGAGAGT 15 14070820 0.599484248 5 15 79 1 1.342422681 0.318181818 0.266666667 0.5 15 0 0 22 3L:14070798-14070836 6 18.5 2070 FBgn0267795 5755.37 129.1033333 198.11 0.003214389 0.143296068 0.093382464 -3 -3 -3 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA 3L 143868 143873 + 3L_143868_143873_+ 0.999967833 0.999977868 0.99997285 7.14E-06 Pdk1 FBtr0072464|FBtr0072470|FBtr0072467|FBtr0072471|FBtr0072466|FBtr0072465|FBtr0333218 143819|143819|143819|143819|143819|143819|143819 144642|145293|145293|145293|145293|144642|145895 3L + 143737 144054 stop_codon Pdk1 FlyBase G26662.1 CAAGCTTCGACGGCGTCTGACAACCGGACATTGGGTAGCACCAGAACGGGGACGTCACCTAGCAAGAAGACGGCGTCTAAGTAAACGTAGTCCTATTTATAGCAATGTGAAATTAATTTAGTTGAAATTTAGTGCAAACGAAGCGATGGCGTAGAAGAGGGCGGGAATAGAAGTAAGCTTAGAAGTAGAAGTAAGTGATGAAGGGGAAATAATGATCGTGTCTCTAGTGCTAATTAGAACCAAATTTCTGTTTTCCGATTTGTATTGTGCTTAGGGCGAAAATATAACACTAGAATAAACTTATCTAAAGTAAAATAC 336 143865 0.981656492 48 321 2349 0.955380577 1.782950133 0.367454068 0.119047619 0.223097113 336 12 5 364 3L:143737-144054 6 Pdk1 FBtr0333218|FBtr0072468|FBtr0072470|FBtr0072466|FBtr0072465|FBtr0072464|FBtr0072469|FBtr0072467|FBtr0072471 143819|143819|143819|143819|143819|143819|143819|143819|143819 145895|144054|145293|145293|144642|144642|144054|145293|145293 GTGCAA 6mer3-8 dme-miR-92b-3p 3L + 143815 143909 stop_codon Pdk1 FlyBase G20164.1 AAGTAAACGTAGTCCTATTTATAGCAATGTGAAATTAATTTAGTTGAAATTTAGTGCAAACGAAGCGATGGCGTAGAAGAGGGCGGGAATAGAAG 169 143865 0.976748223 12 158 1070 0.930041152 1.752048448 0.440329218 0.343195266 0.543209877 169 14 3 226 3L:143815-143909 6 168.5 2071 FBgn0020386 1614.923333 45.11666667 69.42333333 0.104339318 3.734761729 2.42713785 3 3 3 0.1 dme-miR-1007-3p 6mer3-8 TGAGCT 3L 144398 144403 + 3L_144398_144403_+ 0.743545285 0.980988207 0.862266746 0.167897485 Pdk1 FBtr0072464|FBtr0072470|FBtr0072467|FBtr0072471|FBtr0072466|FBtr0072465|FBtr0333218 143819|143819|143819|143819|143819|143819|143819 144642|145293|145293|145293|145293|144642|145895 3L + 144366 144415 5'utr Pdk1 FlyBase G26665.1 TTGTAAACAGTGTAACTATGTACAGAACTATGTGAGCTATATGCACACGG 14 144384 0.7993439 5 14 89 1 1.255272505 0.111111111 0.214285714 0.388888889 14 0 0 18 3L:144366-144415 6 Pdk1 FBtr0333218|FBtr0072470|FBtr0072466|FBtr0072465|FBtr0072464|FBtr0072467|FBtr0072471 143819|143819|143819|143819|143819|143819|143819 145895|145293|145293|144642|144642|145293|145293 TGAGCT 6mer3-8 dme-miR-1007-3p 3L + 144367 144416 5'utr Pdk1 FlyBase G20168.1 TGTAAACAGTGTAACTATGTACAGAACTATGTGAGCTATATGCACACGGC 13 144384 0.760431845 5 11 81 0.85 1.230448921 0.5 0.461538462 0.65 13 3 0 17 3L:144367-144416 6 9 2072 FBgn0020386 1614.923333 45.11666667 69.42333333 0.00557302 0.199482822 0.12963941 14 14 14 0.1 dme-miR-14-3p 6mer3-8 AAGACT 3L 144608 144613 + 3L_144608_144613_+ 0.998606753 0.984599606 0.991603179 0.009904586 Pdk1 FBtr0072464|FBtr0072470|FBtr0072467|FBtr0072471|FBtr0072466|FBtr0072465|FBtr0333218 143819|143819|143819|143819|143819|143819|143819 144642|145293|145293|145293|145293|144642|145895 3L + 144538 144629 5'utr Pdk1 FlyBase G26667.1 CGCTAATTATCATTATTTATCATTCTCATTATGCTTTTCGTTTACCTATTTGCCCTATAATGAAATGTATAAGACTTGAGCTACCCTAATAA 64 144578 0.990181488 16 62 622 0.972972973 1.857332496 0.121621622 0.15625 0.27027027 64 2 0 72 3L:144538-144629 6 Pdk1 FBtr0333218|FBtr0072470|FBtr0072466|FBtr0072465|FBtr0072464|FBtr0072467|FBtr0072471 143819|143819|143819|143819|143819|143819|143819 145895|145293|145293|144642|144642|145293|145293 AAGACT 6mer3-8 dme-miR-14-3p 3L + 144499 144627 5'utr Pdk1 FlyBase G20169.1 CACGCTCAACTGTTTAGGTAATTCTAATATACAGTTTAACGCTAATTATCATTATTTATCATTCTCATTATGCTTTTCGTTTACCTATTTGCCCTATAATGAAATGTATAAGACTTGAGCTACCCTAAT 44 144587 0.986589864 15 40 398 0.876923077 1.755874856 0.184615385 0.386363636 0.584615385 44 8 0 57 3L:144499-144627 6 19.5 2073 FBgn0020386 1614.923333 45.11666667 69.42333333 0.012074877 0.432212782 0.280885389 30 21 25.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3L 14539898 14539903 + 3L_14539898_14539903_+ 0.831725052 0.999882493 0.915803773 0.118905238 Mpcp FBtr0308595|FBtr0075718|FBtr0075719 14539891|14539891|14539891 14540441|14540441|14540441 3L + 14539881 14540033 stop_codon Mpcp FlyBase G30271.1 AAGCAGCATTAAGTGGGCTAGTCCAATTGGTTACCTTAAGGACAGAGTTCACTAGTTGGAGCGATTGTGGGCAGACACAGGAGCAACATACTTTTACTTTCTAACGAATTTCGGTTTCAGTATAGCGAAAATGCTTTATACTTGTTTCTCAGC 70 14539908 0.976732454 19 68 456 0.975609756 1.903089987 0.304878049 0.157142857 0.280487805 70 2 0 80 3L:14539881-14540033 6 Mpcp FBtr0308595|FBtr0075718|FBtr0075719 14539891|14539891|14539891 14540441|14540441|14540441 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3L + 14539858 14539996 stop_codon Mpcp FlyBase G22899.1 AGATGCCAGCTAGCCTGAAGGCCAAGCAGCATTAAGTGGGCTAGTCCAATTGGTTACCTTAAGGACAGAGTTCACTAGTTGGAGCGATTGTGGGCAGACACAGGAGCAACATACTTTTACTTTCTAACGAATTTCGGTT 41 14539908 0.973140363 17 40 243 0.983050847 1.763427994 0.254237288 0.365853659 0.559322034 41 1 0 58 3L:14539858-14539996 6 32.5 2074 FBgn0026409 3078.873333 220.3166667 336.4133333 0.010555809 0.147514941 0.096607348 -10 -10 -10 0.1 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 14541397 14541404 - 3L_14541397_14541404_- 0.643564177 0.643564193 0.643564185 0 Gbs-70E FBtr0333037|FBtr0075724 14540935|14541044 14542118|14542118 3L - 14541352 14541432 3'utr Gbs-70E FlyBase G36754.1 TTTTATCTTTTTGGTTACTTGAAACGCTAAGACTGAAATGGCTTGTTATGGAGAAGAAAACACGTCCTGCAATACATTATA 403 14541405 0.934959122 14 377 2083 0.931623932 1.794388449 0.162393162 0.141439206 0.260683761 403 26 6 436 3L:14541352-14541432 8 Gbs-70E FBtr0075724|FBtr0333037 14541044|14540935 14542118|14542118 AAGACTGA 8mer-A1 dme-miR-14-3p 3L - 14541350 14541420 3'utr Gbs-70E FlyBase G27745.1 GGTTACTTGAAACGCTAAGACTGAAATGGCTTGTTATGGAGAAGAAAACACGTCCTGCAATACATTATATA 261 14541405 0.91487113 10 236 1092 0.908641975 1.963787827 0.187654321 0.390804598 0.607407407 261 34 3 368 3L:14541350-14541420 8 317 2075 FBgn0036428 388.9433333 16.83333333 25.64666667 0.815028753 18.83168317 12.36028074 1 1 1 0.1 dme-miR-1006-3p 6mer2-7 GAATTT 3L 14541613 14541618 - 3L_14541613_14541618_- 0.999416521 0.98377246 0.99159449 0.011061978 Gbs-70E FBtr0333037|FBtr0075724|FBtr0075723 14540935|14541044|14541535 14542118|14542118|14542118 3L - 14541586 14541628 3'utr Gbs-70E FlyBase G36755.2 GAAAGGAGATGAATTTTGAGGCGTGAAGCATTCAAGCAAACCA 12 14541612 0.680673601 5 10 48 0.923076923 1.079181246 0.538461538 0.083333333 0.153846154 12 1 0 12 3L:14541586-14541628 6 Gbs-70E FBtr0075723|FBtr0075724|FBtr0333037 14541535|14541044|14540935 14542118|14542118|14542118 GAATTT 6mer2-7 dme-miR-1006-3p 3L - 14541563 14541631 3'utr Gbs-70E FlyBase G27746.1 AATGAAAGGAGATGAATTTTGAGGCGTGAAGCATTCAAGCAAACCATTGTTTCGAAATTTACTGCAACT 15 14541612 0.963503076 7 15 78 1 1.342422681 0.318181818 0.4 0.590909091 15 0 0 22 3L:14541563-14541631 6 9.5 2076 FBgn0036428 388.9433333 16.83333333 25.64666667 0.024425152 0.564356436 0.370418508 -6 -6 -6 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 14541698 14541703 - 3L_14541698_14541703_- 0.99980446 0.999999618 0.999902039 0.000137957 Gbs-70E FBtr0333037|FBtr0333037|FBtr0333037|FBtr0075724|FBtr0075724|FBtr0075724|FBtr0075723|FBtr0075723|FBtr0075723 14540935|14540935|14540935|14541044|14541044|14541044|14541535|14541535|14541535 14542118|14542118|14542118|14542118|14542118|14542118|14542118|14542118|14542118 3L - 14541662 14541741 3'utr Gbs-70E FlyBase G36756.1 TTGGAAAAGATAGATTTATATGTTTACCTGTATGCCTGTGTGATCGTCTACATCTATATAACTGATACTAGATTTATGTT 30 14541705 0.863588096 9 27 255 0.906976744 1.290034611 0.046511628 0.3 0.511627907 30 3 1 39 3L:14541662-14541741 6 Gbs-70E FBtr0075723|FBtr0075723|FBtr0075723|FBtr0075724|FBtr0075724|FBtr0075724|FBtr0333037|FBtr0333037|FBtr0333037 14541535|14541535|14541535|14541044|14541044|14541044|14540935|14540935|14540935 14542118|14542118|14542118|14542118|14542118|14542118|14542118|14542118|14542118 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 14541653 14541716 3'utr Gbs-70E FlyBase G27747.1 ACCTGTATGCCTGTGTGATCGTCTACATCTATATAACTGATACTAGATTTATGTTAACTAAAAA 16 14541705 0.759781657 10 16 134 1 1.342422681 0.045454545 0.125 0.363636364 16 0 0 22 3L:14541653-14541716 6 14.5 2077 FBgn0036428 388.9433333 16.83333333 25.64666667 0.037280495 0.861386139 0.565375617 2 2 2 0.1 dme-miR-305-3p 8mer-A1 ATGTGCCA 3L 14541904 14541911 - 3L_14541904_14541911_- 0.527389111 0.445633167 0.486511139 0.057810151 Gbs-70E FBtr0333037|FBtr0075724|FBtr0075723 14540935|14541044|14541535 14542118|14542118|14542118 3L - 14541882 14541950 3'utr Gbs-70E FlyBase G36757.1 TGACCTAAGCTAATACCCGGTACAAATATCCCAATTTTAATGTGCCATTGACTTGAGGTTTACTCAATA 15 14541901 0.896376721 4 12 108 0.833333333 0.875061263 0 0.2 0.333333333 15 2 1 15 3L:14541882-14541950 8 Gbs-70E FBtr0075723|FBtr0075724|FBtr0333037 14541535|14541044|14540935 14542118|14542118|14542118 ATGTGCCA 8mer-A1 dme-miR-305-3p 3L - 14541861 14541913 3'utr Gbs-70E FlyBase G27748.1 TAATGTGCCATTGACTTGAGGTTTACTCAATATAAAATGAGATAGGAGGGCTT 12 14541896 0.985621338 8 11 82 0.894736842 1.230448921 0 0.5 0.684210526 12 2 0 17 3L:14541861-14541913 8 8.5 2078 FBgn0036428 388.9433333 16.83333333 25.64666667 0.021854083 0.504950495 0.331427086 -10 -15 -12.5 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 3L 14541925 14541931 - 3L_14541925_14541931_- 0.5311857 0.433244311 0.482215005 0.069255028 Gbs-70E FBtr0333037|FBtr0075724|FBtr0075723 14540935|14541044|14541535 14542118|14542118|14542118 3L - 14541882 14541950 3'utr Gbs-70E FlyBase G36757.1 TGACCTAAGCTAATACCCGGTACAAATATCCCAATTTTAATGTGCCATTGACTTGAGGTTTACTCAATA 15 14541937 0.896376721 4 12 108 0.833333333 0.875061263 0 0.2 0.333333333 15 2 1 15 3L:14541882-14541950 7 Gbs-70E FBtr0075723|FBtr0075724|FBtr0333037 14541535|14541044|14540935 14542118|14542118|14542118 GTACAAA 7mer-A1 dme-miR-305-5p 3L - 14541924 14541965 3'utr Gbs-70E FlyBase G27749.1 ACTAACGAAACTTTTTGACCTAAGCTAATACCCGGTACAAAT 6 14541937 0.952401687 3 6 28 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3L:14541924-14541965 7 5 2079 FBgn0036428 388.9433333 16.83333333 25.64666667 0.012855343 0.297029703 0.194957109 6 6 6 0.1 dme-miR-11-3p 7mer-m1 TGTGATG 3L 14628472 14628478 - 3L_14628472_14628478_- 0.612062563 0.608132561 0.610097562 0.00277893 RecQ5 FBtr0100362|FBtr0075714 14628158|14628158 14630439|14630508 3L - 14628457 14628496 5'utr-intron RecQ5 FlyBase G36768.1 TTGCTCACTCAGCGCATTTGTGATGGAAGCTTAGGTAAGA 17 14628479 0.752964507 3 17 106 1 1.380211242 0 0.235294118 0.458333333 17 0 0 24 3L:14628457-14628496 7 RecQ5 FBtr0075714|FBtr0100362 14628158|14628158 14630508|14630439 TGTGATG 7mer-m1 dme-miR-11-3p 3L - 14628464 14628504 5'utr RecQ5 FlyBase G27756.1 TGGCAAAATTGCTCACTCAGCGCATTTGTGATGGAAGCTTA 12 14628479 0.71989218 4 11 77 0.823529412 1.146128036 0 0.333333333 0.529411765 12 3 0 14 3L:14628464-14628504 7 14.5 2080 FBgn0027375 1332.03 47.24333333 72.63666667 0.010885641 0.306921612 0.199623698 1 1 1 0.1 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 14630025 14630031 - 3L_14630025_14630031_- 0.823309698 0.823346475 0.823328086 2.60E-05 RecQ5 FBtr0100362|FBtr0075714 14628158|14628158 14630439|14630508 3L - 14629970 14630054 5'utr RecQ5 FlyBase G36773.1 TTAATCTTCGAAAGCAAATTAGTGCAGCTAGGCAGTTGGAACAGGAAACAATTGCTCAAATATCTCGCGTTCGAATGGCAGAAGC 14 14630035 0.969930584 8 12 70 0.933333333 1.146128036 0.2 0.071428571 0.133333333 14 1 0 14 3L:14629970-14630054 7 RecQ5 FBtr0075714|FBtr0100362 14628158|14628158 14630508|14630439 GCAGCTA 7mer-A1 dme-miR-980-3p 3L - 14630014 14630050 5'utr RecQ5 FlyBase G27759.1 TCTTCGAAAGCAAATTAGTGCAGCTAGGCAGTTGGAA 12 14630035 0.688493435 4 12 50 1 1.230448921 0.235294118 0.25 0.470588235 12 0 0 17 3L:14630014-14630050 7 10 2081 FBgn0027375 1332.03 47.24333333 72.63666667 0.007507338 0.211670077 0.137671516 4 4 4 0.1 dme-miR-1007-3p 7mer-m8 TGAGCTT 3L 1467403 1467409 + 3L_1467403_1467409_+ 0.616529575 0.620203442 0.618366508 0.002597769 rho FBtr0333207|FBtr0072694 1467352|1467352 1468944|1468475 3L + 1467394 1467441 3'utr rho FlyBase G27088.1 GAATCTGCTTGAGCTTCAGGAGAGATCGAGAGACAGAGAGTTGGTGGA 9 1467408 0.955610728 4 8 36 0.9 0.954242509 0.4 0.111111111 0.2 9 1 0 9 3L:1467394-1467441 7 rho FBtr0333207|FBtr0072694 1467352|1467352 1468944|1468475 TGAGCTT 7mer-m8 dme-miR-1007-3p 3L + 1467397 1467436 3'utr rho FlyBase G20506.1 TCTGCTTGAGCTTCAGGAGAGATCGAGAGACAGAGAGTTG 10 1467405 0.671125668 3 6 33 0.6875 0.740362689 0.9375 0.4 0.625 10 4 1 11 3L:1467397-1467436 7 6.5 2082 FBgn0004635 880.87 41.8 65 0.007379068 0.155502392 0.1 -5 -2 -3.5 0.1 dme-miR-999-3p 6mer3-8 AGTTAA 3L 1467539 1467544 + 3L_1467539_1467544_+ 0.999999795 0.999967384 0.999983589 2.29E-05 rho FBtr0333207|FBtr0072694 1467352|1467352 1468944|1468475 3L + 1467508 1467555 3'utr rho FlyBase G27089.1 TTAGCATTATCTCGTTATCGTTACCGTTTGCAGTTAAACGTTTCAGTT 6 1467535 0.990548828 3 5 62 0.888888889 0.602059991 0 0.333333333 0.555555556 6 0 1 8 3L:1467508-1467555 6 rho FBtr0333207|FBtr0072694 1467352|1467352 1468944|1468475 AGTTAA 6mer3-8 dme-miR-999-3p 3L + 1467505 1467555 3'utr rho FlyBase G20507.1 TCGTTAGCATTATCTCGTTATCGTTACCGTTTGCAGTTAAACGTTTCAGTT 7 1467535 0.986245425 3 7 60 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 3L:1467505-1467555 6 4 2083 FBgn0004635 880.87 41.8 65 0.004540965 0.09569378 0.061538462 4 4 4 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 1467677 1467683 + 3L_1467677_1467683_+ 0.689274298 0.681837527 0.685555913 0.005258612 rho FBtr0333207|FBtr0333207|FBtr0333207|FBtr0072694|FBtr0072694|FBtr0072694 1467352|1467352|1467352|1467352|1467352|1467352 1468944|1468944|1468944|1468475|1468475|1468475 3L + 1467651 1467702 3'utr rho FlyBase G27090.1 CGAAGCCGAAACGTGTAAACAAATGTTGTGATAGAACCAAAGACTGAATTTA 65 1467675 0.842953324 5 60 354 0.936708861 1.568201724 0 0.2 0.341772152 65 4 1 74 3L:1467651-1467702 7 rho FBtr0333207|FBtr0333207|FBtr0333207|FBtr0072694|FBtr0072694|FBtr0072694 1467352|1467352|1467352|1467352|1467352|1467352 1468944|1468944|1468944|1468475|1468475|1468475 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 1467657 1467703 3'utr rho FlyBase G20508.1 CGAAACGTGTAAACAAATGTTGTGATAGAACCAAAGACTGAATTTAT 60 1467674 0.829437338 7 56 327 0.94047619 1.897627091 0.023809524 0.3 0.5 60 5 0 79 3L:1467657-1467703 7 62.5 2084 FBgn0004635 880.87 41.8 65 0.070952581 1.495215311 0.961538462 2 3 2.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 3L 14750650 14750655 - 3L_14750650_14750655_- 0.999937038 0.999729313 0.999833176 0.000146866 Trl FBtr0075705|FBtr0075706|FBtr0333046 14750240|14750240|14750240 14751158|14752905|14751158 3L - 14750615 14750709 5'utr Trl FlyBase G36781.1 TAAGTTTAAAAATCCTTGAGTTACAAAGATTTACTTAAGCAGCTCAAAAGTAATTGATCTGATCAAAAGAGAGTTCGCTCAACAAGGTTTCTAAA 27 14750656 0.97315691 9 26 158 0.971428571 1.230448921 0.114285714 0.259259259 0.428571429 27 0 1 34 3L:14750615-14750709 6 Trl FBtr0333046|FBtr0075705|FBtr0075706 14750240|14750240|14750240 14751158|14751158|14752905 TGATCT 6mer3-8 dme-bantam-3p 3L - 14750600 14750677 5'utr Trl FlyBase G27765.1 ACTTAAGCAGCTCAAAAGTAATTGATCTGATCAAAAGAGAGTTCGCTCAACAAGGTTTCTAAAAACCCACCCACCAAC 19 14750656 0.968011888 3 18 103 1 1.397940009 0.24 0.263157895 0.44 19 0 0 25 3L:14750600-14750677 6 17 2085 FBgn0013263 1897.606667 85.71333333 130.6566667 0.008958653 0.198335537 0.130111998 1 1 1 0.1 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3L 14750824 14750831 - 3L_14750824_14750831_- 0.580429974 0.629968687 0.60519933 0.035029151 Trl FBtr0075705|FBtr0075706|FBtr0333046 14750240|14750240|14750240 14751158|14752905|14751158 3L - 14750731 14750876 5'utr Trl FlyBase G36782.1 TTATCATTTTGTATGGTTTTACAAATGTCCCAATGCTAGAGGACCTCTAGTCATTTTGAAGTCCTGCAGATCAGTAAACACCTTAATCCAACAAGGATCCCTTGCTCACGTCCAGATTTTGGCCATGAACGAATGCACCTTGATTT 36 14750831 0.985527625 13 31 255 0.888888889 1 0.088888889 0.222222222 0.377777778 36 2 3 40 3L:14750731-14750876 8 Trl FBtr0333046|FBtr0075705|FBtr0075706 14750240|14750240|14750240 14751158|14751158|14752905 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L - 14750731 14750843 5'utr Trl FlyBase G27766.1 TGCTAGAGGACCTCTAGTCATTTTGAAGTCCTGCAGATCAGTAAACACCTTAATCCAACAAGGATCCCTTGCTCACGTCCAGATTTTGGCCATGAACGAATGCACCTTGATTT 34 14750831 0.936371086 15 33 208 0.97826087 1.653212514 0.173913043 0.352941176 0.52173913 34 1 0 45 3L:14750731-14750843 8 17 2086 FBgn0013263 1897.606667 85.71333333 130.6566667 0.008958653 0.198335537 0.130111998 0 0 0 0.1 dme-miR-970-3p 8mer-A1 TCTTATGA 3L 14750986 14750993 - 3L_14750986_14750993_- 0.573889379 0.630789095 0.602339237 0.040234164 Trl FBtr0075705|FBtr0075706|FBtr0333046|FBtr0075703 14750240|14750240|14750240|14750952 14751158|14752905|14751158|14751158 3L - 14750954 14751050 5'utr Trl FlyBase G36783.1 AATTAGTTTTAGAAAGCCAGAAAGGCATATTTAGTTGTTTACCGTTTTGTTGTACAATCTTATGACTTTAAATGTTGATTTACCCCTCCTACAACTT 36 14750971 0.706241606 15 32 305 0.88372093 1.278753601 0.162790698 0.166666667 0.302325581 36 4 1 38 3L:14750954-14751050 8 Trl FBtr0333046|FBtr0075703|FBtr0075705|FBtr0075706 14750240|14750952|14750240|14750240 14751158|14751158|14751158|14752905 TCTTATGA 8mer-A1 dme-miR-970-3p 3L - 14750945 14751000 5'utr-coding Trl FlyBase G27767.1 TGTACAATCTTATGACTTTAAATGTTGATTTACCCCTCCTACAACTTATTTTGTTG 9 14750964 0.985504072 6 9 82 1 1.176091259 0.2 0.555555556 0.733333333 9 0 0 15 3L:14750945-14751000 8 9 2087 FBgn0013263 1897.606667 85.71333333 130.6566667 0.004742816 0.105001167 0.068882823 -22 -29 -25.5 0.1 dme-miR-965-3p 6mer2-7 ACGCTT 3L 14751088 14751093 - 3L_14751088_14751093_- 0.99999905 0.999999963 0.999999506 7.07E-07 Trl FBtr0075705|FBtr0075706|FBtr0333046|FBtr0075703 14750240|14750240|14750240|14750952 14751158|14752905|14751158|14751158 3L - 14751060 14751100 5'utr Trl FlyBase G36784.1 TTGCTAAACGCTTTAAATATTCTCTTTGCGGAATGCGTAGA 5 14751074 0.970214971 5 5 44 1 0.698970004 0.2 0 0 5 0 0 5 3L:14751060-14751100 6 Trl FBtr0333046|FBtr0075703|FBtr0075705|FBtr0075706 14750240|14750952|14750240|14750240 14751158|14751158|14751158|14752905 ACGCTT 6mer2-7 dme-miR-965-3p 3L - 14751016 14751111 5'utr Trl FlyBase G27768.1 AATTTGGGTTTTTGCTAAACGCTTTAAATATTCTCTTTGCGGAATGCGTAGACAAATTCTAAATTAGTTTTAGAAAGCCAGAAAGGCATATTTAGT 13 14751087 0.986098189 8 12 99 0.944444444 0.929418926 0.333333333 0.384615385 0.555555556 13 0 1 17 3L:14751016-14751111 6 4.5 2088 FBgn0013263 1897.606667 85.71333333 130.6566667 0.002371408 0.052500583 0.034441411 -19 -6 -12.5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 14751458 14751463 - 3L_14751458_14751463_- 0.963558893 0.951399494 0.957479193 0.008597994 Trl FBtr0075707|FBtr0075706 14747927|14750240 14752905|14752905 3L - 14751417 14751481 5'utr Trl FlyBase G36788.1 AACAACAGCTGCAACATCACCAAATCATAGACTCGTCGGGCAACATTACAACAGCAACAACGAGT 162 14751454 0.939688605 6 157 621 0.973544974 2.264817823 0.015873016 0.12962963 0.253968254 162 5 0 184 3L:14751417-14751481 6 Trl FBtr0075706|FBtr0075707 14750240|14747927 14752905|14752905 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 14751430 14751480 5'utr Trl FlyBase G27772.1 ACAACAGCTGCAACATCACCAAATCATAGACTCGTCGGGCAACATTACAAC 90 14751454 0.795926118 4 90 344 1 2.133538908 0.022058824 0.377777778 0.588235294 90 0 0 136 3L:14751430-14751480 6 121 2089 FBgn0013263 1897.606667 85.71333333 130.6566667 0.063764531 1.411682352 0.926091282 -9 -9 -9 0.1 dme-miR-317-3p 8mer-A1 TGTGTTCA 3L 14752740 14752747 - 3L_14752740_14752747_- 0.630418562 0.630805733 0.630612147 0.000273721 Trl FBtr0075707|FBtr0075706 14747927|14750240 14752905|14752905 3L - 14752726 14752795 5'utr Trl FlyBase G36795.1 ATAACAATCAGCAAACAAACAAATTCCCCGTGATCTGATCGAATGATTTGTGTTCATTTCCTGTATCATT 294 14752748 0.637609015 11 286 2205 0.971590909 2.534026106 0.09375 0.173469388 0.309659091 294 10 0 342 3L:14752726-14752795 8 Trl FBtr0075706|FBtr0075707 14750240|14747927 14752905|14752905 TGTGTTCA 8mer-A1 dme-miR-317-3p 3L - 14752723 14752828 5'utr Trl FlyBase G27776.1 AAAAAACATAACACTCACAAAAACGATTTGTAAATAACAATCAGCAAACAAACAAATTCCCCGTGATCTGATCGAATGATTTGTGTTCATTTCCTGTATCATTTTT 243 14752748 0.98289456 13 237 1790 0.975903614 2.209515015 0.135542169 0.308641975 0.493975904 243 7 1 324 3L:14752723-14752828 8 103.5 2090 FBgn0013263 1897.606667 85.71333333 130.6566667 0.054542388 1.207513417 0.792152461 1 1 1 0.1 dme-miR-8-3p 6mer3-8 CAGTAT 3L 14766285 14766290 + 3L_14766285_14766290_+ 0.86720071 0.994073947 0.930637328 0.0897129 CG9384 FBtr0333044|FBtr0075690 14765702|14765702 14767703|14767703 3L + 14766266 14766296 3'utr CG9384 FlyBase G30297.1 TTGTTTAATCCCAAGCTGTCAGTATATTTTT 7 14766282 0.888513821 2 7 66 1 0.84509804 0 0 0 7 0 0 7 3L:14766266-14766296 6 CG9384 FBtr0333044|FBtr0075690 14765702|14765702 14767703|14767703 CAGTAT 6mer3-8 dme-miR-8-3p 3L + 14766269 14766319 3'utr CG9384 FlyBase G22916.1 TTTAATCCCAAGCTGTCAGTATATTTTTCGCATAACCATATGGATTTGATA 11 14766284 0.741560886 7 8 82 0.75 1.079181246 0 0.363636364 0.5625 11 4 0 12 3L:14766269-14766319 6 7.5 2091 FBgn0036446 489.33 13.20333333 20.20333333 0.01532708 0.568038374 0.37122587 3 1 2 0.1 dme-miR-970-3p 6mer3-8 TCTTAT 3L 14766593 14766598 + 3L_14766593_14766598_+ 1 1 1 0 CG9384 FBtr0333044|FBtr0075690 14765702|14765702 14767703|14767703 3L + 14766564 14766619 3'utr CG9384 FlyBase G30301.1 AGTGATTAAGAATCTCGAACCCGCTGAAATCTTATCGATCAATTAAGAATTAAGAA 7 14766596 0.975953937 5 6 34 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3L:14766564-14766619 6 CG9384 FBtr0333044|FBtr0075690 14765702|14765702 14767703|14767703 TCTTAT 6mer3-8 dme-miR-970-3p 3L + 14766563 14766601 3'utr CG9384 FlyBase G22917.1 AAGTGATTAAGAATCTCGAACCCGCTGAAATCTTATCGA 6 14766595 0.961214724 5 6 27 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 3L:14766563-14766601 6 4 2092 FBgn0036446 489.33 13.20333333 20.20333333 0.008174443 0.3029538 0.197987131 -3 -2 -2.5 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 3L 14766729 14766734 + 3L_14766729_14766734_+ 0.999035656 0.999999617 0.999517637 0.00068158 CG9384 FBtr0333044|FBtr0075690 14765702|14765702 14767703|14767703 3L + 14766709 14766807 3'utr CG9384 FlyBase G30302.1 ATGAATTCACCCATCATGCTTGTGTTAGTTTTATATAGCCACGTTCTTGAAGATGAAGCCATAACTACATACATAAATAAAATATGCATGAACATAAAC 38 14766725 0.993960087 8 35 425 0.951219512 1.591064607 0.219512195 0.054054054 0.146341463 37 2 0 39 3L:14766709-14766807 6 CG9384 FBtr0333044|FBtr0075690 14765702|14765702 14767703|14767703 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 14766708 14766748 3'utr CG9384 FlyBase G22919.1 TATGAATTCACCCATCATGCTTGTGTTAGTTTTATATAGCC 17 14766725 0.83073772 3 14 187 0.884615385 1.06069784 0.346153846 0.294117647 0.538461538 17 2 1 23 3L:14766708-14766748 6 24.5 2093 FBgn0036446 489.33 13.20333333 20.20333333 0.050068461 1.855592022 1.212671176 4 4 4 0.1 dme-miR-308-3p 8mer-m1 CTGTGATT 3L 14766856 14766863 + 3L_14766856_14766863_+ 0.385560641 0.385560609 0.385560625 0 CG9384 FBtr0333044|FBtr0075690 14765702|14765702 14767703|14767703 3L + 14766816 14766875 3'utr CG9384 FlyBase G30302.2 ATTAAATAACGAAACGATTTTTAGCATTGTTGCTTTTTTACTGTGATTTGTTAATAATTT 49 14766863 0.696481717 10 47 614 0.966101695 1.755874856 0.152542373 0.163265306 0.305084746 49 2 0 57 3L:14766816-14766875 8 CG9384 FBtr0333044|FBtr0075690 14765702|14765702 14767703|14767703 CTGTGATT 8mer-m1 dme-miR-308-3p 3L + 14766830 14766874 3'utr CG9384 FlyBase G22920.1 CGATTTTTAGCATTGTTGCTTTTTTACTGTGATTTGTTAATAATT 37 14766863 0.715685298 10 37 474 1 1.681241237 0.104166667 0.216216216 0.395833333 37 0 0 48 3L:14766830-14766874 8 39 2094 FBgn0036446 489.33 13.20333333 20.20333333 0.079700815 2.953799546 1.930374526 -7 -7 -7 0.1 dme-miR-283-5p 6mer2-7 GATATT 3L 14769424 14769429 - 3L_14769424_14769429_- 0.999804855 0.999999571 0.999902213 0.000137674 mop FBtr0075700 14769339 14769665 3L - 14769422 14769460 3'utr mop FlyBase G36810.1 CGAAATCGAAACCGAATCGTGATGTGTATGGGATATTGT 15 14769436 0.678040115 2 15 79 1 1.255272505 0.111111111 0.2 0.333333333 15 0 0 18 3L:14769422-14769460 6 mop FBtr0075700 14769339 14769665 GATATT 6mer2-7 dme-miR-283-5p 3L - 14769426 14769492 3'utr mop FlyBase G27790.1 CGTCTCTTTCAACTGTTATATAAATTGTAATTCGAAATCGAAACCGAATCGTGATGTGTATGGGATA 12 14769443 0.965589508 7 11 71 0.944444444 1.230448921 0.166666667 0.333333333 0.555555556 12 1 0 17 3L:14769426-14769492 3 3.5 2095 FBgn0036448 1896.993333 38.12666667 58.29333333 0.001845025 0.091799266 0.060041171 7 14 10.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 14776668 14776673 - 3L_14776668_14776673_- 0.999806791 0.999830689 0.99981874 1.69E-05 bmm FBtr0075699|FBtr0300190 14776494|14776494 14777194|14776800 3L - 14776520 14776692 3'utr bmm FlyBase G36845.1 CTTAGTACGACCAACGTATGTACCTAACTTAACTTAGCCGTATGCTGCCATTGTATCATCGTCAGTTTGTAAGCGGCAATTAGCTAATAATTGCATTCTTGTTATTAGTCACCCTCACACGACTTGTATTACATCCAAATCCCCATCTGTGTTTAGCCTAAGTTGATAATGTA 613 14776674 0.975129032 22 604 3799 0.986149584 2.250420002 0.153739612 0.146818923 0.275623269 613 7 3 712 3L:14776520-14776692 6 bmm FBtr0075699|FBtr0300190 14776494|14776494 14777194|14776800 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L - 14776617 14776696 3'utr bmm FlyBase G27811.2 TAGTCTTAGTACGACCAACGTATGTACCTAACTTAACTTAGCCGTATGCTGCCATTGTATCATCGTCAGTTTGTAAGCGG 359 14776674 0.772875575 11 352 2146 0.987522282 2.26638851 0.156862745 0.378830084 0.602495544 359 5 2 554 3L:14776617-14776696 6 412 2096 FBgn0036449 694.9966667 36.28666667 55.66 0.592808599 11.3540327 7.402084082 1 1 1 0.1 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 14800347 14800352 + 3L_14800347_14800352_+ 1 1 1 0 CG9425 FBtr0075693 14799234 14801089 3L + 14800322 14800387 3'utr CG9425 FlyBase G30348.1 ATTTAAATTTGTGCACGAGTTATTTGTTCCTTTGCCCATCCGAAATTGTCGATGCATGTGTAAATT 15 14800346 0.771435887 9 15 148 1 1.255272505 0.222222222 0.2 0.333333333 15 0 0 18 3L:14800322-14800387 6 CG9425 FBtr0075693 14799234 14801089 GTTCCT 6mer2-7 dme-miR-276a-3p 3L + 14800300 14800379 3'utr CG9425 FlyBase G22943.1 TATATATAATATGCATATAAATATTTAAATTTGTGCACGAGTTATTTGTTCCTTTGCCCATCCGAAATTGTCGATGCATG 11 14800346 0.989355944 7 11 108 1 1.176091259 0.266666667 0.272727273 0.466666667 11 0 0 15 3L:14800300-14800379 6 8 2097 FBgn0036451 1200.986667 17.94333333 27.59666667 0.00666119 0.44584804 0.289890083 1 1 1 0.1 dme-miR-8-3p 6mer2-7 AGTATT 3L 14800612 14800617 + 3L_14800612_14800617_+ 1 0.513039733 0.756519867 0.34433293 CG9425 FBtr0075693 14799234 14801089 3L + 14800587 14800638 3'utr CG9425 FlyBase G30350.1 TTAATCAATCTTTGAGTTTTATCGTAGTATTTTGGCTAGCGACTTGGATAGC 8 14800617 0.994434582 5 5 61 0.75 0.77815125 0.375 0 0 8 2 0 6 3L:14800587-14800638 6 CG9425 FBtr0075693 14799234 14801089 AGTATT 6mer2-7 dme-miR-8-3p 3L + 14800600 14800641 3'utr CG9425 FlyBase G22946.1 GAGTTTTATCGTAGTATTTTGGCTAGCGACTTGGATAGCGTA 8 14800618 0.685161862 3 7 76 0.8 1.079181246 0.333333333 0.625 0.8 8 3 0 12 3L:14800600-14800641 6 5.5 2098 FBgn0036451 1200.986667 17.94333333 27.59666667 0.004579568 0.306520528 0.199299432 -5 -6 -5.5 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG 3L 1491256 1491261 - 3L_1491256_1491261_- 0.999999246 0.999999999 0.999999622 5.66E-07 CG12084 FBtr0332656 1490949 1491753 3L - 1491224 1491289 3'utr CG12084 FlyBase G33306.1 ACGATGCTCACTTAACCCCCCCACATTTGCTGTGCTTTCGCATCACGAACCCAAGTAGCTGCAAGT 21 1491263 0.98295709 5 21 157 1 1.361727836 0.086956522 0.095238095 0.173913043 21 0 0 23 3L:1491224-1491289 6 CG12084 FBtr0332656 1490949 1491753 GCTGTG 6mer2-7 dme-miR-1008-3p 3L - 1491214 1491289 3'utr CG12084 FlyBase G25197.1 ACGATGCTCACTTAACCCCCCCACATTTGCTGTGCTTTCGCATCACGAACCCAAGTAGCTGCAAGTTCAGGATCGG 7 1491263 0.968399461 5 7 34 1 1 0 0.285714286 0.5 7 0 0 10 3L:1491214-1491289 6 11 2099 FBgn0043458 1091.493333 38.07666667 58.14666667 0.010077936 0.288890834 0.189176794 2 2 2 0.1 dme-miR-276a-3p 7mer-m8 AGTTCCT 3L 14991486 14991492 + 3L_14991486_14991492_+ 0.631420787 0.631524653 0.63147272 7.35E-05 mnd FBtr0075626|FBtr0114529|FBtr0075627 14991215|14991215|14991215 14991667|14991667|14991667 3L + 14991256 14991581 3'utr mnd FlyBase G30373.2 TGTGGATGTATCGATCAACGCAACTATAGAAGGGAATATCTTGTAGTTAGGATAAGTCTCAATTTACCCCTAAGATAGGTTAGCAACGCGAAATTTTGAAAACCTACGCACAACATTACAAAAGTGTTATTGTAAATAACTCAAATGCATTCTGGTAGGGAAGTCCCTGCTTCAATTAATATTATTTGTTAGTCGTACTTTTAATGTATATTTCAAACCCAAAAAAAATGAGTTCCTCGTCGAAAGCAGAAGTACGCCTGTTATACAAAATGCGAACCAATTTTTACATATTATACAAGTAATTAGGAGCTTATTCAGTAAGTAAT 210 14991485 0.972122629 38 194 1265 0.933609959 1.507084478 0.232365145 0.123809524 0.236514523 210 10 6 225 3L:14991256-14991581 7 mnd FBtr0114529|FBtr0075627|FBtr0075626 14991215|14991215|14991215 14991667|14991667|14991667 AGTTCCT 7mer-m8 dme-miR-276a-3p 3L + 14991470 14991564 3'utr mnd FlyBase G22959.1 AAACCCAAAAAAAATGAGTTCCTCGTCGAAAGCAGAAGTACGCCTGTTATACAAAATGCGAACCAATTTTTACATATTATACAAGTAATTAGGAG 30 14991485 0.969287592 13 29 163 0.954545455 1.62324929 0.159090909 0.3 0.522727273 30 2 0 42 3L:14991470-14991564 7 32 2100 FBgn0002778 691.1866667 34.75 53.52333333 0.046297189 0.920863309 0.597870088 1 1 1 0.1 dme-miR-1006-3p 7mer-m8 CGAATTT 3L 14991621 14991627 + 3L_14991621_14991627_+ 0.661614282 0.661614704 0.661614493 2.83E-07 mnd FBtr0075626|FBtr0114529|FBtr0075627 14991215|14991215|14991215 14991667|14991667|14991667 3L + 14991593 14991645 3'utr mnd FlyBase G30374.1 ATGCAACTTTTTGCGAAATGTAAAAAATCGAATTTGTTTTGTATAAGAAAGTT 33 14991620 0.929422371 4 30 308 0.947368421 1.556302501 0.184210526 0.121212121 0.236842105 33 2 0 36 3L:14991593-14991645 7 mnd FBtr0114529|FBtr0075627|FBtr0075626 14991215|14991215|14991215 14991667|14991667|14991667 CGAATTT 7mer-m8 dme-miR-1006-3p 3L + 14991593 14991641 3'utr mnd FlyBase G22960.1 ATGCAACTTTTTGCGAAATGTAAAAAATCGAATTTGTTTTGTATAAGAA 12 14991620 0.986979778 3 11 96 1 1.230448921 0.294117647 0.25 0.470588235 12 0 0 17 3L:14991593-14991641 7 21 2101 FBgn0002778 691.1866667 34.75 53.52333333 0.030382531 0.604316547 0.392352245 1 1 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 15001485 15001490 - 3L_15001485_15001490_- 0.987894413 0.983704206 0.985799309 0.002962919 Reck FBtr0333876|FBtr0075671 15001236|15001236 15001821|15001821 3L - 15001477 15001522 3'utr Reck FlyBase G36875.1 TCTGGATCGTAAAAGTACAAAGAGATTGATGGACCAAAACTCGACA 70 15001493 0.881062089 5 67 197 0.964705882 1.913813852 0.070588235 0.171428571 0.317647059 70 3 0 82 3L:15001477-15001522 6 Reck FBtr0333876|FBtr0075671 15001236|15001236 15001821|15001821 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 15001478 15001526 3'utr Reck FlyBase G27836.1 AAAATCTGGATCGTAAAAGTACAAAGAGATTGATGGACCAAAACTCGAC 48 15001493 0.902513836 3 48 125 1 1.86332286 0.082191781 0.375 0.589041096 48 0 0 73 3L:15001478-15001526 6 55.5 2102 FBgn0036463 378 10.74666667 16.56333333 0.146825397 5.16439206 3.350774804 3 3 3 0.1 dme-miR-263a-5p 6mer3-8 GTGCCA 3L 15001765 15001770 - 3L_15001765_15001770_- 0.952049087 0.896881279 0.924465183 0.039009525 Reck FBtr0333876|FBtr0075671 15001236|15001236 15001821|15001821 3L - 15001687 15001958 stop_codon Reck FlyBase G36876.1 CAACCAATCTAGCTCTATCCTGTTTGACAGTATCGCATCTACTAGAACCCACGCCAAATGGAGCTACATCTTATGGTCCCCACGCCATTTGGATACTCCCCTTACTTTTGTTAGTTTCTAGAGTAATCATAGCTTAAGATAGTCCTAGAAGGAGTGTGTATGATCTGACTCAATCAAGTGAATTCTTGGTGCCAATTAACCCGTTATTCTAAGGAGATGGAAAGTGCCTTCAACTGTAAGGAATTGACCCTCTGTACCATGTGATATTAGCT 499 15001773 0.998993863 52 457 3673 0.92092257 1.349471799 0.179571664 0.176352705 0.322899506 499 24 24 559 3L:15001687-15001958 6 Reck FBtr0333876|FBtr0075671 15001236|15001236 15001821|15001821 GTGCCA 6mer3-8 dme-miR-263a-5p 3L - 15001687 15001834 stop_codon Reck FlyBase G27837.1 AATCATAGCTTAAGATAGTCCTAGAAGGAGTGTGTATGATCTGACTCAATCAAGTGAATTCTTGGTGCCAATTAACCCGTTATTCTAAGGAGATGGAAAGTGCCTTCAACTGTAAGGAATTGACCCTCTGTACCATGTGATATTAGCT 350 15001773 0.781999025 34 310 2550 0.877862595 0.990659974 0.185114504 0.365714286 0.576335878 350 18 46 460 3L:15001687-15001834 6 193.5 2103 FBgn0036463 378 10.74666667 16.56333333 0.511904762 18.00558313 11.68243107 3 3 3 0.1 dme-miR-79-3p 8mer-A1 TAGCTTTA 3L 1503362 1503369 - 3L_1503362_1503369_- 0.625353101 0.625353764 0.625353433 4.95E-07 cue FBtr0072706 1503224 1503826 3L - 1503313 1503407 3'utr cue FlyBase G33337.2 CGTCATGTTGAAATGAATGCAAGTCGCGCGACTGACATTAGCTTTAAAAACGGATTACGCGGCCGCAAGACCATTGCGATTGTGATGATTGCATC 780 1503370 0.786645013 13 768 4364 0.988184748 2.662757832 0.383458647 0.158974359 0.29538131 780 10 1 920 3L:1503313-1503407 8 cue FBtr0072706 1503224 1503826 TAGCTTTA 8mer-A1 dme-miR-79-3p 3L - 1503298 1503417 3'utr cue FlyBase G25215.1 ACTTTGAATACGTCATGTTGAAATGAATGCAAGTCGCGCGACTGACATTAGCTTTAAAAACGGATTACGCGGCCGCAAGACCATTGCGATTGTGATGATTGCATCCGGATCTGTTGTAAT 598 1503370 0.968722558 20 589 3253 0.988358556 2.92890769 0.339930151 0.339464883 0.54016298 598 10 0 849 3L:1503298-1503417 8 658.5 2104 FBgn0011204 1050.61 45.31 69.18333333 0.626778729 14.53321563 9.518188388 1 1 1 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3L 1503555 1503561 - 3L_1503555_1503561_- 0.808756377 0.808804613 0.808780495 3.41E-05 cue FBtr0072706|FBtr0072706 1503224|1503224 1503826|1503826 3L - 1503543 1503730 3'utr cue FlyBase G33338.2 AAGCTGCTGCCCGCCCGGCCCTCGACCCCGTTAGCCGCCAAGGTGCTCGCCCAGGCAACCAGCAACTAGAAACCAATTACCAACCAGCCACAGCAATGTGCAACCAGCAACAGCAGCCTAATACTTAACACTCGCCTGGGACACTTAACACTCGCCAAACCAAACCATTTACTTAAGCCGAAGCAACA 128 1503563 0.840186522 20 119 458 0.939597315 1.544068044 0.073825503 0.140625 0.261744966 128 6 3 140 3L:1503543-1503730 7 cue FBtr0072706|FBtr0072706 1503224|1503224 1503826|1503826 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3L - 1503546 1503615 3'utr cue FlyBase G25217.1 GCCTAATACTTAACACTCGCCTGGGACACTTAACACTCGCCAAACCAAACCATTTACTTAAGCCGAAGCA 47 1503563 0.802760007 12 43 197 0.929577465 1.342422681 0.042253521 0.425531915 0.61971831 47 3 2 66 3L:1503546-1503615 7 42 2105 FBgn0011204 1050.61 45.31 69.18333333 0.039976775 0.926947694 0.607082631 2 2 2 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 1503773 1503779 - 3L_1503773_1503779_- 0.801961112 0.80196639 0.801963751 3.75E-06 cue FBtr0072706|FBtr0072706|FBtr0072706 1503224|1503224|1503224 1503826|1503826|1503826 3L - 1503731 1503811 3'utr cue FlyBase G33339.1 CGGACATCCACCTGCGCCTCAAAACTGAACCTTGTGATAGTCGTCGTCGTCGAGTGCGGATTTGGTGTATTCGAGCTTGAA 607 1503780 0.795159161 16 570 4303 0.946478873 1.526339277 0.123943662 0.140032949 0.264788732 607 19 19 672 3L:1503731-1503811 7 cue FBtr0072706|FBtr0072706|FBtr0072706 1503224|1503224|1503224 1503826|1503826|1503826 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 1503745 1503867 stop_codon cue FlyBase G25219.1 AGAAGATACTCATCCACAACATGGAGGATGACCTGTACTAGGGCGCGACGGACGGACGGACATCCACCTGCGCCTCAAAACTGAACCTTGTGATAGTCGTCGTCGTCGAGTGCGGATTTGGTG 416 1503780 0.982078088 20 389 2872 0.93533123 1.411326857 0.140378549 0.360576923 0.58044164 416 19 22 593 3L:1503745-1503867 7 493 2106 FBgn0011204 1050.61 45.31 69.18333333 0.469251197 10.88060031 7.125993736 1 1 1 0.1 dme-miR-999-3p 6mer3-8 AGTTAA 3L 15066536 15066541 - 3L_15066536_15066541_- 0.999822366 0.86193318 0.930877773 0.097502388 cp309 FBtr0333940|FBtr0333944|FBtr0333947|FBtr0333945|FBtr0333939|FBtr0333946|FBtr0333943|FBtr0099993|FBtr0305979|FBtr0305977|FBtr0333942|FBtr0333941 15066239|15066079|15066239|15066239|15066239|15066239|15066239|15066239|15066239|15066239|15066239|15066239 15066671|15066671|15066671|15066671|15066671|15066671|15066671|15066671|15066671|15066671|15066671|15066671 3L - 15066465 15066576 3'utr cp309 FlyBase G36883.1 AGCATCAAGGATGTTGGACAAGCGATCCATTTTAGAGTTAATCACCTGTACCATTTCCCCTCATTATTAGATCTTAAGCTGTTGTAACCTATTTTAAGCGTTCGCGCAACCA 34 15066530 0.988202686 12 34 303 1 1.531478917 0.058823529 0 0 34 0 0 34 3L:15066465-15066576 6 cp309 FBtr0333941|FBtr0333942|FBtr0305977|FBtr0305979|FBtr0099993|FBtr0333943|FBtr0333947|FBtr0333946|FBtr0333939|FBtr0333945|FBtr0333944|FBtr0333940 15066239|15066239|15066239|15066239|15066239|15066239|15066239|15066239|15066239|15066239|15066079|15066239 15066671|15066671|15066671|15066671|15066671|15066671|15066671|15066671|15066671|15066671|15066671|15066671 AGTTAA 6mer3-8 dme-miR-999-3p 3L - 15066497 15066548 3'utr cp309 FlyBase G27844.1 ATTTTAGAGTTAATCACCTGTACCATTTCCCCTCATTATTAGATCTTAAGCT 24 15066530 0.832012838 5 20 213 0.787878788 1.414973348 0.090909091 0.25 0.454545455 24 7 0 26 3L:15066497-15066548 6 21.5 2107 FBgn0086690 2713.58 47.46 72.97333333 0.007923113 0.453013064 0.294628175 -11 -11 -11 0.1 dme-miR-14-3p 6mer3-8 AAGACT 3L 15090878 15090883 - 3L_15090878_15090883_- 0.999555008 1 0.999777504 0.000314663 CG6945 FBtr0075657 15090821 15091353 3L - 15090868 15090924 5'utr CG6945 FlyBase G36900.1 AATATACCGATTGGATACTGATATATTCACCGAGTTTTCTTAAGACTAACTACCGAC 18 15090885 0.691128991 9 16 133 0.904761905 1.278753601 0.380952381 0.166666667 0.285714286 18 2 0 19 3L:15090868-15090924 6 CG6945 FBtr0075657 15090821 15091353 AAGACT 6mer3-8 dme-miR-14-3p 3L - 15090857 15090926 5'utr CG6945 FlyBase G27861.1 TGAATATACCGATTGGATACTGATATATTCACCGAGTTTTCTTAAGACTAACTACCGACAAGCAATAACA 7 15090885 0.979085478 6 7 53 1 1 0.3 0.142857143 0.4 7 0 0 10 3L:15090857-15090926 6 7 2108 FBgn0036476 404.2866667 17.14 26.23666667 0.017314447 0.4084014 0.266802185 2 2 2 0.1 dme-bantam-3p 8mer-A1 TGATCTCA 3L 15127543 15127550 + 3L_15127543_15127550_+ 0.631136382 0.631129228 0.631132805 5.09E-06 Cep135 FBtr0333853 15127334 15128029 3L + 15127488 15127572 3'utr Cep135 FlyBase G30414.1 TGCGCGATGAGCTTCAGCAGAGCTTGGCCATTAATCAGGTCACCAACGAAACCACTGATCTCATGCTCGGGCGCTTGCACAATGA 109 15127551 0.95625757 7 107 502 0.983870968 1.785329835 0.274193548 0.128440367 0.233870968 109 1 1 122 3L:15127488-15127572 8 Cep135 FBtr0333853 15127334 15128029 TGATCTCA 8mer-A1 dme-bantam-3p 3L + 15127524 15127570 3'utr Cep135 FlyBase G22997.1 AGGTCACCAACGAAACCACTGATCTCATGCTCGGGCGCTTGCACAAT 68 15127551 0.703646431 4 67 324 0.990825688 1.73239376 0.211009174 0.411764706 0.633027523 68 0 1 108 3L:15127524-15127570 8 88 2109 FBgn0036480 383.3666667 13.55333333 20.77666667 0.229545257 6.492867683 4.235520616 -8 -8 -8 0.1 dme-bantam-3p 6mer3-8 TGATCT 3L 15131749 15131754 - 3L_15131749_15131754_- 0.999963345 0.999939445 0.999951395 1.69E-05 CG12316 FBtr0075651|FBtr0075652 15131506|15131506 15131804|15131804 3L - 15131699 15131822 stop_codon CG12316 FlyBase G36906.1 TCGAAGGATTTAGTTTAGGATCTCCCCACACAGACCAGTTGTAGTTCCAGTTGCCGATCCAATCCCATTGATCTTGGCCTGCAATAGTATTTGTATTATTTTTTTGAAGAAACGTCTGTAAAAC 86 15131755 0.838501485 18 78 575 0.911764706 1.366422957 0.117647059 0.186046512 0.31372549 86 6 3 93 3L:15131699-15131822 6 CG12316 FBtr0075652|FBtr0075651 15131506|15131506 15131804|15131804 TGATCT 6mer3-8 dme-bantam-3p 3L - 15131699 15131812 stop_codon CG12316 FlyBase G27865.1 TAGTTTAGGATCTCCCCACACAGACCAGTTGTAGTTCCAGTTGCCGATCCAATCCCATTGATCTTGGCCTGCAATAGTATTTGTATTATTTTTTTGAAGAAACGTCTGTAAAAC 54 15131755 0.846206634 15 45 383 0.891566265 1.392110465 0.156626506 0.425925926 0.626506024 54 7 2 74 3L:15131699-15131812 6 46 2110 FBgn0036483 307.04 9.166666667 14.16333333 0.149817613 5.018181818 3.247823017 1 1 1 0.1 dme-miR-305-5p 6mer3-8 AGTACA 3L 15137923 15137928 - 3L_15137923_15137928_- 0.999999998 0.998643745 0.999321871 0.000959049 Pdi FBtr0075648|FBtr0346644 15137736|15137736 15138187|15138187 3L - 15137867 15137951 3'utr Pdi FlyBase G36917.1 ATTCGCATACTTCCGTTGTATGTAGTACATTTGCGACGCAGATAACGATGATTACACGTCCGCTGTTTGCATGAACTTAAAATTC 48 15137900 0.769372962 15 48 348 1 1.73239376 0.148148148 0.125 0.222222222 48 0 0 54 3L:15137867-15137951 6 Pdi FBtr0075648|FBtr0346644 15137736|15137736 15138187|15138187 AGTACA 6mer3-8 dme-miR-305-5p 3L - 15137867 15137942 3'utr Pdi FlyBase G27874.1 CTTCCGTTGTATGTAGTACATTTGCGACGCAGATAACGATGATTACACGTCCGCTGTTTGCATGAACTTAAAATTC 30 15137900 0.720167176 12 29 208 0.916666667 1.643452676 0.270833333 0.466666667 0.666666667 30 4 0 44 3L:15137867-15137942 6 16.5 2111 FBgn0014002 7431.146667 432.6266667 661.87 0.002220384 0.038139119 0.024929367 -28 -28 -28 0.1 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 15154579 15154586 - 3L_15154579_15154586_- 0.612811712 0.61440051 0.613606111 0.001123451 Msh6 FBtr0075646 15154231 15154664 3L - 15154444 15154614 3'utr Msh6 FlyBase G36934.1 AAACATGTTTACTTATGATTCGCCAAGAGGCAGCTATGCTGGAATTTGATGTATACGAAGCTTTTTAAGACTTTTTCACCATTTCAGTATGCATTTTTTTTGTAGTTTTTATAAGGAATTTGAATCAAAACCTGTGCCATTCTCAACATTCTCAATTAAGCAAAATGGAAC 117 15154578 0.980341138 26 103 853 0.881118881 2.100370545 0.083916084 0.205128205 0.34965035 117 17 0 126 3L:15154444-15154614 8 Msh6 FBtr0075646 15154231 15154664 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L - 15154467 15154610 3'utr Msh6 FlyBase G27890.1 ATGTTTACTTATGATTCGCCAAGAGGCAGCTATGCTGGAATTTGATGTATACGAAGCTTTTTAAGACTTTTTCACCATTTCAGTATGCATTTTTTTTGTAGTTTTTATAAGGAATTTGAATCAAAACCTGTGCCATTCTCAACA 90 15154596 0.887134801 20 86 592 0.944444444 2.075546961 0.126984127 0.3 0.5 90 7 0 119 3L:15154467-15154610 8 52.5 2112 FBgn0036486 1407.773333 41.68666667 63.93666667 0.037292935 1.25939549 0.821125072 -8 10 1 0.1 dme-miR-282-5p 7mer-A1 GAGGCTA 3L 15154638 15154644 - 3L_15154638_15154644_- 0.823336731 0.823329025 0.823332878 5.44E-06 Msh6 FBtr0075646 15154231 15154664 3L - 15154629 15154666 stop_codon Msh6 FlyBase G36935.1 AGGGTGCAGAAGCTCCAAAGTTGAGGCTACCAGACACC 46 15154645 0.722163575 2 44 143 0.945454545 1.414973348 0.109090909 0.173913043 0.309090909 46 2 1 52 3L:15154629-15154666 7 Msh6 FBtr0075646 15154231 15154664 GAGGCTA 7mer-A1 dme-miR-282-5p 3L - 15154621 15154657 3'utr Msh6 FlyBase G27891.1 AAGCTCCAAAGTTGAGGCTACCAGACACCATTTCCCA 20 15154646 0.906806879 2 20 63 1 1.568201724 0 0.55 0.756756757 20 0 0 37 3L:15154621-15154657 7 33 2113 FBgn0036486 1407.773333 41.68666667 63.93666667 0.023441274 0.791620022 0.516135759 1 2 1.5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 3L 1522942 1522948 + 3L_1522942_1522948_+ 0.67134697 0.671677001 0.671511986 0.000233345 Psa FBtr0072700|FBtr0072697|FBtr0072701|FBtr0306557|FBtr0072702|FBtr0072699|FBtr0072698|FBtr0333395 1522918|1522918|1522918|1522918|1522918|1522918|1522918|1522918 1523380|1523380|1523380|1523380|1523380|1523380|1523380|1523380 3L + 1522905 1523042 stop_codon Psa FlyBase G27115.1 AGGGATGACCAATAAACGTTATTGCGCTCGCCAGCATACCAAAGCATTTAACAACAATCACCAGCAGTGTAACCACAGCAACAGCAACGCCAACGCAGCACCATCATCAGCACCAGTAACCCGTAACCAGGTCATCGT 35 1522941 0.961506541 9 34 124 1 1.579783597 0.131578947 0.057142857 0.131578947 35 0 0 38 3L:1522905-1523042 7 Psa FBtr0072698|FBtr0333395|FBtr0072702|FBtr0072699|FBtr0072701|FBtr0306557|FBtr0072700|FBtr0072697 1522918|1522918|1522918|1522918|1522918|1522918|1522918|1522918 1523380|1523380|1523380|1523380|1523380|1523380|1523380|1523380 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 1522918 1522958 stop_codon Psa FlyBase G20523.1 AAACGTTATTGCGCTCGCCAGCATACCAAAGCATTTAACAA 8 1522941 0.925001087 3 6 27 0.692307692 0.954242509 0 0.625 0.769230769 8 4 0 9 3L:1522918-1522958 7 11.5 2114 FBgn0261243 1862.84 60.46333333 92.53333333 0.00617337 0.190197916 0.124279539 1 1 1 0.1 dme-miR-968-5p 6mer3-8 ACTACT 3L 1523208 1523213 + 3L_1523208_1523213_+ 0.670833261 0.500008876 0.585421069 0.120791092 Psa FBtr0072700|FBtr0072697|FBtr0072701|FBtr0306557|FBtr0072702|FBtr0072699|FBtr0072698|FBtr0333395 1522918|1522918|1522918|1522918|1522918|1522918|1522918|1522918 1523380|1523380|1523380|1523380|1523380|1523380|1523380|1523380 3L + 1523114 1523222 3'utr Psa FlyBase G27116.1 GTACTCCTAAAGATGAGAGCCAAATAGGTTAGCTTTAGTCAAGGATCCACCTACAGCCACTGCTCCAACCGGGCGTGCTTACATATATCGATTGACTACTCGCCCCAGC 40 1523205 0.948908266 10 40 215 1 1.69019608 0.285714286 0.15 0.306122449 40 0 0 49 3L:1523114-1523222 6 Psa FBtr0072698|FBtr0333395|FBtr0072702|FBtr0072699|FBtr0072701|FBtr0306557|FBtr0072700|FBtr0072697 1522918|1522918|1522918|1522918|1522918|1522918|1522918|1522918 1523380|1523380|1523380|1523380|1523380|1523380|1523380|1523380 ACTACT 6mer3-8 dme-miR-968-5p 3L + 1523173 1523223 3'utr Psa FlyBase G20525.1 CTGCTCCAACCGGGCGTGCTTACATATATCGATTGACTACTCGCCCCAGCA 13 1523205 0.968175557 5 13 76 1 1.397940009 0.16 0.461538462 0.72 13 0 0 25 3L:1523173-1523223 6 17 2115 FBgn0261243 1862.84 60.46333333 92.53333333 0.009125851 0.281162137 0.183717579 3 3 3 0.1 dme-miR-14-3p 6mer2-7 AGACTG 3L 15242280 15242285 + 3L_15242280_15242285_+ 0.99999986 0.999999997 0.999999928 7.07E-08 Tollo FBtr0075607 15240160 15242832 3L + 15242260 15242297 3'utr Tollo FlyBase G30437.1 TAGAAGGATTCACTTGGTTTAGACTGTAAAGAGTTAAA 15 15242278 0.683931682 5 14 114 0.944444444 1.230448921 0.166666667 0.2 0.333333333 15 1 0 17 3L:15242260-15242297 6 Tollo FBtr0075607 15240160 15242832 AGACTG 6mer2-7 dme-miR-14-3p 3L + 15242261 15242298 3'utr Tollo FlyBase G23014.1 AGAAGGATTCACTTGGTTTAGACTGTAAAGAGTTAAAT 13 15242278 0.656065455 5 12 93 0.916666667 1.342422681 0.291666667 0.615384615 0.791666667 13 2 0 22 3L:15242261-15242298 6 14 2116 FBgn0029114 1018.113333 17.04 26.18666667 0.013750925 0.821596244 0.534623218 2 2 2 0.1 dme-miR-283-5p 8mer-m1 TGATATTT 3L 15242345 15242352 + 3L_15242345_15242352_+ 0.512092065 0.446090701 0.479091383 0.046670038 Tollo FBtr0075607 15240160 15242832 3L + 15242323 15242370 3'utr Tollo FlyBase G30438.1 ACGTTTATTTGTTTAATCATTGTGATATTTTGTTTTATCAATAAGTCC 63 15242342 0.69995681 13 57 841 0.923076923 1.158362492 0.243589744 0.174603175 0.333333333 63 2 4 72 3L:15242323-15242370 8 Tollo FBtr0075607 15240160 15242832 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 15242323 15242362 3'utr Tollo FlyBase G23015.1 ACGTTTATTTGTTTAATCATTGTGATATTTTGTTTTATCA 39 15242341 0.708563098 8 37 484 0.921875 1.770852012 0.140625 0.41025641 0.640625 39 5 0 59 3L:15242323-15242362 8 51 2117 FBgn0029114 1018.113333 17.04 26.18666667 0.050092655 2.992957746 1.947556008 3 4 3.5 0.1 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 1535130 1535136 - 3L_1535130_1535136_- 0.823349555 0.823349562 0.823349559 0 CG12091 FBtr0333400|FBtr0072831 1534927|1535010 1535595|1535595 3L - 1535077 1535180 3'utr CG12091 FlyBase G33360.1 TGGAAGCTGGATGGATGGTGGACCCGGAATGGAGCGAGTCGAGTGCAGCTATCTGACTGAGGACGGAGGATTACCCATTTACGCGGGCGAACGAACTGTCTTTA 30 1535129 0.777278922 13 24 135 0.846153846 0.916453949 0.307692308 0.266666667 0.435897436 30 3 3 33 3L:1535077-1535180 7 CG12091 FBtr0072831|FBtr0333400 1535010|1534927 1535595|1535595 GCAGCTA 7mer-A1 dme-miR-980-3p 3L - 1535035 1535182 3'utr CG12091 FlyBase G25231.1 GATGGAAGCTGGATGGATGGTGGACCCGGAATGGAGCGAGTCGAGTGCAGCTATCTGACTGAGGACGGAGGATTACCCATTTACGCGGGCGAACGAACTGTCTTTAAACAATTTTTGTCGAAATGTACTCACTGATATTTGCGACCCA 36 1535137 0.92588976 13 31 162 0.854166667 1.612783857 0.416666667 0.222222222 0.416666667 36 7 0 41 3L:1535035-1535182 7 20 2118 FBgn0035228 678.3333333 45.40666667 69.66333333 0.029484029 0.440463955 0.287095076 -7 1 -3 0.1 dme-bantam-3p 6mer2-7 GATCTC 3L 1535285 1535290 - 3L_1535285_1535290_- 0.744693248 0.99994038 0.872316814 0.180487026 CG12091 FBtr0333400|FBtr0072831 1534927|1535010 1535595|1535595 3L - 1535253 1535312 3'utr CG12091 FlyBase G33361.1 CGAATTATCTGCCCGATCTGGCGATCTCTGTCGTCAGTGGCGTTCTAATCACCACAAACA 24 1535284 0.878644258 6 24 174 1 1.491361694 0.419354839 0.208333333 0.387096774 24 0 0 31 3L:1535253-1535312 6 CG12091 FBtr0072831|FBtr0333400 1535010|1534927 1535595|1535595 GATCTC 6mer2-7 dme-bantam-3p 3L - 1535267 1535321 3'utr CG12091 FlyBase G25232.1 TAGAGAATGCGAATTATCTGCCCGATCTGGCGATCTCTGTCGTCAGTGGCGTTCT 23 1535284 0.741501405 4 19 157 0.916666667 1.041392685 0.208333333 0.608695652 0.8125 23 1 3 44 3L:1535267-1535321 6 20 2119 FBgn0035228 678.3333333 45.40666667 69.66333333 0.029484029 0.440463955 0.287095076 -6 -6 -6 0.1 dme-miR-13b-2-5p 7mer-A1 TTGACGA 3L 1535458 1535464 - 3L_1535458_1535464_- 0.391681081 0.541556787 0.466618934 0.105978124 CG12091 FBtr0333400|FBtr0072831 1534927|1535010 1535595|1535595 3L - 1535415 1535624 stop_codon CG12091 FlyBase G33363.1 CCGTTGTCCTGGCCACCGTGGCGATGTGAGAGTGGTGCTCCAGCCCATCCTCCCTAGTGATTAACGTTTACTTGTAGTCCGTACGTGTTTAGTTAGCTTTAGGAGCCAGTTTCGTGGTTCTGTCTACCGTTTAAGCTGCATGTTGAGATTGAGATTGTGATTGACGAGGACGACGACCCTTTGACCCTTTGCATTGTTAGTTACATATAT 459 1535470 0.817845686 34 445 3211 0.969811321 1.932811869 0.581132075 0.139433551 0.254716981 459 11 5 514 3L:1535415-1535624 7 CG12091 FBtr0072831|FBtr0333400 1535010|1534927 1535595|1535595 TTGACGA 7mer-A1 dme-miR-13b-2-5p 3L - 1535423 1535583 3'utr CG12091 FlyBase G25234.1 AGCCCATCCTCCCTAGTGATTAACGTTTACTTGTAGTCCGTACGTGTTTAGTTAGCTTTAGGAGCCAGTTTCGTGGTTCTGTCTACCGTTTAAGCTGCATGTTGAGATTGAGATTGTGATTGACGAGGACGACGACCCTTTGACCCTTTGCATTGTTAGTT 352 1535470 0.805250796 24 351 2442 0.998123827 2.424881637 0.544090056 0.352272727 0.572232645 352 0 1 532 3L:1535423-1535583 7 209 2120 FBgn0035228 678.3333333 45.40666667 69.66333333 0.308108108 4.602848334 3.000143548 6 6 6 0.1 dme-miR-79-3p 8mer-A1 TAGCTTTA 3L 1535524 1535531 - 3L_1535524_1535531_- 0.625281937 0.625345752 0.625313844 4.52E-05 CG12091 FBtr0333400|FBtr0072831 1534927|1535010 1535595|1535595 3L - 1535415 1535624 stop_codon CG12091 FlyBase G33363.1 CCGTTGTCCTGGCCACCGTGGCGATGTGAGAGTGGTGCTCCAGCCCATCCTCCCTAGTGATTAACGTTTACTTGTAGTCCGTACGTGTTTAGTTAGCTTTAGGAGCCAGTTTCGTGGTTCTGTCTACCGTTTAAGCTGCATGTTGAGATTGAGATTGTGATTGACGAGGACGACGACCCTTTGACCCTTTGCATTGTTAGTTACATATAT 459 1535532 0.817845686 34 445 3211 0.969811321 1.932811869 0.581132075 0.139433551 0.254716981 459 11 5 514 3L:1535415-1535624 8 CG12091 FBtr0072831|FBtr0333400 1535010|1534927 1535595|1535595 TAGCTTTA 8mer-A1 dme-miR-79-3p 3L - 1535423 1535583 3'utr CG12091 FlyBase G25234.1 AGCCCATCCTCCCTAGTGATTAACGTTTACTTGTAGTCCGTACGTGTTTAGTTAGCTTTAGGAGCCAGTTTCGTGGTTCTGTCTACCGTTTAAGCTGCATGTTGAGATTGAGATTGTGATTGACGAGGACGACGACCCTTTGACCCTTTGCATTGTTAGTT 352 1535532 0.805250796 24 351 2442 0.998123827 2.424881637 0.544090056 0.352272727 0.572232645 352 0 1 532 3L:1535423-1535583 8 128 2121 FBgn0035228 678.3333333 45.40666667 69.66333333 0.188697789 2.818969314 1.837408488 1 1 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 3L 1544622 1544629 + 3L_1544622_1544629_+ 0.643565699 0.64356572 0.643565709 0 CG7852 FBtr0072736|FBtr0072737|FBtr0072735 1544074|1541507|1544074 1544823|1544823|1544823 3L + 1544600 1544641 3'utr CG7852 FlyBase G27133.1 AGCTTTTAGTTTAGTTGATTTTACCAAAGAATCTTTGTTTTT 20 1544621 0.838294311 4 19 209 0.954545455 1.021189299 0 0.1 0.181818182 20 0 1 21 3L:1544600-1544641 8 CG7852 FBtr0072737|FBtr0072735|FBtr0072736 1541507|1544074|1544074 1544823|1544823|1544823 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 1544612 1544634 3'utr CG7852 FlyBase G20537.1 AGTTGATTTTACCAAAGAATCTT 5 1544621 0.724904695 3 5 28 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3L:1544612-1544634 8 12 2122 FBgn0035229 480 10.39 15.81 0.025 1.154956689 0.759013283 1 1 1 0.1 dme-miR-307a-3p 6mer3-8 GGTTGT 3L 15503460 15503465 + 3L_15503460_15503465_+ 0.95189033 0.999999861 0.975945095 0.034018624 CG7272 FBtr0075548 15503417 15503769 3L + 15503413 15503479 stop_codon CG7272 FlyBase G30466.1 AAATAATTGAAATCGAACGCTTTACCTAGAAAAAAGGACAAATAATGGGTTGTTGCAACAACATTAC 34 15503435 0.942142138 13 28 157 0.860465116 1.091080469 0.162790698 0.264705882 0.418604651 34 4 2 37 3L:15503413-15503479 6 CG7272 FBtr0075548 15503417 15503769 GGTTGT 6mer3-8 dme-miR-307a-3p 3L + 15503417 15503473 stop_codon CG7272 FlyBase G23035.1 AATTGAAATCGAACGCTTTACCTAGAAAAAAGGACAAATAATGGGTTGTTGCAACAA 20 15503463 0.723834527 8 17 93 0.884615385 1.361727836 0.115384615 0.2 0.384615385 20 3 0 23 3L:15503417-15503473 6 10 2123 FBgn0036501 774.8233333 80.60666667 124.19 0.012906168 0.124059218 0.080521781 25 -3 11 0.1 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 15510691 15510696 + 3L_15510691_15510696_+ 0.999999782 1 0.999999891 1.41E-07 gdl-ORF39 FBtr0091756 15509667 15510837 3L + 15510671 15510706 3'utr gdl-ORF39 FlyBase G30469.1 AAGGAGATAAAAATACAAATGTTCCTGTTGGACTTC 9 15510690 0.971506622 3 9 62 1 1.204119983 0.5625 0.444444444 0.6875 9 0 0 16 3L:15510671-15510706 6 gdl-ORF39 FBtr0091756 15509667 15510837 GTTCCT 6mer2-7 dme-miR-276a-3p 3L + 15510672 15510705 3'utr gdl-ORF39 FlyBase G23037.1 AGGAGATAAAAATACAAATGTTCCTGTTGGACTT 6 15510690 0.963257686 3 6 40 1 1.041392685 0.818181818 0.666666667 0.818181818 6 0 0 11 3L:15510672-15510705 6 7.5 2124 FBgn0028377 16.80333333 2.22 3.413333333 0.446340012 3.378378378 2.197265625 1 1 1 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 3L 15510787 15510792 + 3L_15510787_15510792_+ 0.999992597 0.999943341 0.999967969 3.49E-05 gdl-ORF39 FBtr0091756 15509667 15510837 3L + 15510737 15510816 3'utr gdl-ORF39 FlyBase G30470.1 CCCGGCAAATAACAGTTAGTCCACAATCCGGAGAACACAAAAGACTGCACTTGACTTGTTCAAATTAGAATATTAAAGGC 24 15510792 0.986692301 9 22 184 0.888888889 0.903089987 0.222222222 0.125 0.222222222 24 1 2 24 3L:15510737-15510816 6 gdl-ORF39 FBtr0091756 15509667 15510837 TTGACT 6mer3-8 dme-miR-1012-3p 3L + 15510753 15510815 3'utr gdl-ORF39 FlyBase G23038.1 TAGTCCACAATCCGGAGAACACAAAAGACTGCACTTGACTTGTTCAAATTAGAATATTAAAGG 20 15510793 0.989813305 6 17 164 0.888888889 1.204119983 0.194444444 0.45 0.694444444 20 3 1 32 3L:15510753-15510815 6 20 2125 FBgn0028377 16.80333333 2.22 3.413333333 1.190240032 9.009009009 5.859375 -5 -6 -5.5 0.1 dme-miR-14-3p 6mer3-8 AAGACT 3L 1552936 1552941 + 3L_1552936_1552941_+ 0.535826408 0.665809022 0.600817715 0.091911578 Cct1 FBtr0072739|FBtr0333396|FBtr0345365|FBtr0072741|FBtr0072740|FBtr0072738 1552625|1552625|1552625|1552625|1552625|1552625 1553236|1553236|1553504|1553236|1553236|1553236 3L + 1552809 1553041 3'utr Cct1 FlyBase G27145.1 AGTTGGCACTCGTTCTCCTCCTGCCTCAACTCCACCTGCCCATCTCCATCTGTGAGAATCGAGGGAATCCTGTAGCTAATTTAGCTGTGTGTGTGTGTGTGTGGGACAAGCAACCACCAACGCGGAAAAGACTCATTTTTGTATTAGGCACTCGACGGACTGTGCACGAAATCAATCGGCAGTGGCGGCAGATTCAGGTGCCGAAAATATCTAGAAATATTTATATTAAATTA 153 1552945 0.982640827 29 134 1011 0.897142857 1.292809665 0.2 0.124183007 0.234285714 153 11 7 157 3L:1552809-1553041 6 Cct1 FBtr0072740|FBtr0072738|FBtr0072739|FBtr0333396|FBtr0345365|FBtr0072741 1552625|1552625|1552625|1552625|1552625|1552625 1553236|1553236|1553236|1553236|1553504|1553236 AAGACT 6mer3-8 dme-miR-14-3p 3L + 1552810 1552982 3'utr Cct1 FlyBase G20548.1 GTTGGCACTCGTTCTCCTCCTGCCTCAACTCCACCTGCCCATCTCCATCTGTGAGAATCGAGGGAATCCTGTAGCTAATTTAGCTGTGTGTGTGTGTGTGTGGGACAAGCAACCACCAACGCGGAAAAGACTCATTTTTGTATTAGGCACTCGACGGACTGTGCACGAAATCA 103 1552945 0.969997818 21 91 580 0.866197183 1.48784512 0.253521127 0.300970874 0.492957746 103 16 3 123 3L:1552810-1552982 6 48.5 2126 FBgn0041342 2223.53 107.32 164.7166667 0.021812164 0.451919493 0.294445007 -9 -9 -9 0.1 dme-miR-2b-2-5p 7mer-A1 TGAAGAA 3L 15551449 15551455 + 3L_15551449_15551455_+ 0.80545704 0.823005218 0.814231129 0.012408451 CrebA FBtr0075558|FBtr0075557 15551273|15551273 15553214|15551905 3L + 15551421 15551454 3'utr CrebA FlyBase G30489.1 GTTTCGATTTAATCAGTCTGGGAGTTTGTGAAGA 10 15551433 0.772231358 5 10 78 1 1.079181246 0.5 0.2 0.333333333 10 0 0 12 3L:15551421-15551454 6 CrebA FBtr0075557|FBtr0075558 15551273|15551273 15551905|15553214 TGAAGAA 7mer-A1 dme-miR-2b-2-5p 3L + 15551426 15551489 3'utr CrebA FlyBase G23059.1 GATTTAATCAGTCTGGGAGTTTGTGAAGAATTTATGCGACGAGGAAACTTTAATGAATTTTTTG 12 15551447 0.94822406 8 10 82 0.95 1.278753601 0.25 0.333333333 0.6 12 1 0 19 3L:15551426-15551489 7 6 2127 FBgn0004396 2312.63 76.99666667 118.8566667 0.002594449 0.077925451 0.050480971 16 2 9 0.1 dme-bantam-3p 6mer3-8 TGATCT 3L 15551698 15551703 + 3L_15551698_15551703_+ 0.977566331 0.904226492 0.940896411 0.05185907 CrebA FBtr0075558|FBtr0075557 15551273|15551273 15553214|15551905 3L + 15551556 15551744 3'utr CrebA FlyBase G30490.2 AATAAATATTCCACAGGGCCGAGATGACCAGAATGCCCATAACTAATATCGTATAAATAATATGTGTATGTAATCCTAGCTACTTGTAGGGCCTATATTATAAAGCTATGTATATTAGTCATGCATTCCTGTTATATAAACTTGATCTAGCTTAGGCAAATGACCAGCTGCAGCAACAACCACAATTAC 308 15551698 0.952304315 31 289 2365 0.941340782 1.92556991 0.097765363 0.149350649 0.268156425 308 18 3 337 3L:15551556-15551744 6 CrebA FBtr0075557|FBtr0075558 15551273|15551273 15551905|15553214 TGATCT 6mer3-8 dme-bantam-3p 3L + 15551617 15551744 3'utr CrebA FlyBase G23061.1 ATGTGTATGTAATCCTAGCTACTTGTAGGGCCTATATTATAAAGCTATGTATATTAGTCATGCATTCCTGTTATATAAACTTGATCTAGCTTAGGCAAATGACCAGCTGCAGCAACAACCACAATTAC 207 15551697 0.736924534 24 189 1582 0.910596026 1.837272703 0.119205298 0.352657005 0.556291391 207 24 3 275 3L:15551617-15551744 6 197.5 2128 FBgn0004396 2312.63 76.99666667 118.8566667 0.085400605 2.565046106 1.661665311 0 1 0.5 0.1 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 15552118 15552123 + 3L_15552118_15552123_+ 0.996485999 0.999942893 0.998214446 0.002444397 CrebA FBtr0075558 15551273 15553214 3L + 15552057 15552134 3'utr CrebA FlyBase G30493.2 TGAATGAATTAACGAAAGACTCCCGGAGCTCAATCTCTGTGCTGTCTTTGGCATGACTATTGTTCCTTTAAACGATAT 37 15552116 0.770716109 14 32 288 0.895833333 1.156347201 0.1875 0.27027027 0.4375 37 3 2 43 3L:15552057-15552134 6 CrebA FBtr0075558 15551273 15553214 GTTCCT 6mer2-7 dme-miR-276a-3p 3L + 15552072 15552141 3'utr CrebA FlyBase G23064.1 AAGACTCCCGGAGCTCAATCTCTGTGCTGTCTTTGGCATGACTATTGTTCCTTTAAACGATATTTCTCAA 28 15552117 0.713180509 8 27 242 0.956521739 1.643452676 0.304347826 0.428571429 0.652173913 28 2 0 44 3L:15552072-15552141 6 20 2129 FBgn0004396 2312.63 76.99666667 118.8566667 0.008648162 0.259751504 0.168269905 2 1 1.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3L 15552667 15552672 + 3L_15552667_15552672_+ 0.999999999 0.999999996 0.999999997 0 CrebA FBtr0075558 15551273 15553214 3L + 15552642 15552765 3'utr CrebA FlyBase G30495.1 TTTCGCAGCGTTCTAAATGAGTCATTCTAGTTTTTATTAGTTGAATTTATAAACACAAAATTACTTAACGGAAATTTCAAGCGTAACCCGTTGATTTCCTATCAACTCGATAATATGTATCTAT 99 15552666 0.909863664 15 96 907 0.965517241 2.049218023 0.120689655 0.151515152 0.275862069 99 4 0 112 3L:15552642-15552765 6 CrebA FBtr0075558 15551273 15553214 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 15552637 15552870 3'utr CrebA FlyBase G23067.1 ATTCTTTTCGCAGCGTTCTAAATGAGTCATTCTAGTTTTTATTAGTTGAATTTATAAACACAAAATTACTTAACGGAAATTTCAAGCGTAACCCGTTGATTTCCTATCAACTCGATAATATGTATCTATAAAATATAATTTAGCTATTTCTACGTATGTCTGTGCATGTGTGTATAAATCAAGCGGGCGAAGTTGTGCAATTGTTAGAAAATTTTTAAAAGAAAGATATTTAGT 60 15552666 0.988255138 17 52 472 0.873563218 1.579783597 0.310344828 0.333333333 0.540229885 60 10 1 76 3L:15552637-15552870 6 43 2130 FBgn0004396 2312.63 76.99666667 118.8566667 0.018593549 0.558465734 0.361780296 1 1 1 0.1 dme-miR-92b-3p 8mer-m1 GTGCAATT 3L 15552831 15552838 + 3L_15552831_15552838_+ 0.59668397 0.594397503 0.595540737 0.0016168 CrebA FBtr0075558 15551273 15553214 3L + 15552773 15552847 3'utr CrebA FlyBase G30496.1 AATTTAGCTATTTCTACGTATGTCTGTGCATGTGTGTATAAATCAAGCGGGCGAAGTTGTGCAATTGTTAGAAAA 19 15552830 0.736639603 10 19 156 1 1.342422681 0.181818182 0.105263158 0.227272727 19 0 0 22 3L:15552773-15552847 8 CrebA FBtr0075558 15551273 15553214 GTGCAATT 8mer-m1 dme-miR-92b-3p 3L + 15552637 15552870 3'utr CrebA FlyBase G23067.1 ATTCTTTTCGCAGCGTTCTAAATGAGTCATTCTAGTTTTTATTAGTTGAATTTATAAACACAAAATTACTTAACGGAAATTTCAAGCGTAACCCGTTGATTTCCTATCAACTCGATAATATGTATCTATAAAATATAATTTAGCTATTTCTACGTATGTCTGTGCATGTGTGTATAAATCAAGCGGGCGAAGTTGTGCAATTGTTAGAAAATTTTTAAAAGAAAGATATTTAGT 60 15552830 0.988255138 17 52 472 0.873563218 1.579783597 0.310344828 0.333333333 0.540229885 60 10 1 76 3L:15552637-15552870 8 11 2131 FBgn0004396 2312.63 76.99666667 118.8566667 0.004756489 0.142863327 0.092548448 1 1 1 0.1 dme-miR-92b-3p 7mer-m8 GTGCAAT 3L 15552915 15552921 + 3L_15552915_15552921_+ 0.659000018 0.658978369 0.658989194 1.53E-05 CrebA FBtr0075558 15551273 15553214 3L + 15552884 15552929 3'utr CrebA FlyBase G30497.1 TCAGAAATCGATGTTGAAAAACAAAACGCTCGTGCAATGACAAACA 9 15552920 0.994317008 3 9 30 1 0.954242509 0.222222222 0 0 9 0 0 9 3L:15552884-15552929 7 CrebA FBtr0075558 15551273 15553214 GTGCAAT 7mer-m8 dme-miR-92b-3p 3L + 15552886 15553030 3'utr CrebA FlyBase G23068.1 AGAAATCGATGTTGAAAAACAAAACGCTCGTGCAATGACAAACAAAATTTTATTAATAAAGCGTTAAACAAACAAATTAAAGACAACATGAAATATACATTATGATATATTTATATATACAAGTATGAATAATGTACGACTATTT 16 15552920 0.984123635 11 15 76 0.961538462 1.397940009 0.230769231 0.4375 0.653846154 16 1 0 25 3L:15552886-15553030 7 6 2132 FBgn0004396 2312.63 76.99666667 118.8566667 0.002594449 0.077925451 0.050480971 -5 -5 -5 0.1 dme-miR-92b-3p 8mer-m1 GTGCAATT 3L 15553173 15553180 + 3L_15553173_15553180_+ 0.595961269 0.596089224 0.596025246 9.04E-05 CrebA FBtr0075558 15551273 15553214 3L + 15553129 15553193 3'utr CrebA FlyBase G30499.1 GTAAAACTTTTATGATTGGTTGCTGTAATTTGGCAAAAGTAAAAGTGCAATTCCAAATAAAATTC 11 15553179 0.965474209 3 9 53 0.923076923 1.079181246 0.230769231 0.2 0.384615385 10 1 0 12 3L:15553129-15553193 8 CrebA FBtr0075558 15551273 15553214 GTGCAATT 8mer-m1 dme-miR-92b-3p 3L + 15553169 15553199 3'utr CrebA FlyBase G23069.2 AAAAGTGCAATTCCAAATAAAATTCAAACAA 8 15553179 0.766985485 2 6 31 0.777777778 0.84509804 0.222222222 0.125 0.222222222 8 2 0 7 3L:15553169-15553199 8 7.5 2133 FBgn0004396 2312.63 76.99666667 118.8566667 0.003243061 0.097406814 0.063101214 -6 -6 -6 0.1 dme-miR-970-3p 7mer-A1 CTTATGA 3L 1555544 1555550 - 3L_1555544_1555550_- 0.823325647 0.823344849 0.823335248 1.36E-05 CG12099 FBtr0072829|FBtr0072828 1555361|1555361 1555568|1555568 3L - 1555526 1555569 stop_codon CG12099 FlyBase G33371.1 AAGAGCTAGATGATGATCGCTTATGAAGTTACAAGATTTATTGT 10 1555556 0.972331617 6 10 61 1 1.176091259 0.466666667 0.4 0.6 10 0 0 15 3L:1555526-1555569 7 CG12099 FBtr0072828|FBtr0072829 1555361|1555361 1555568|1555568 CTTATGA 7mer-A1 dme-miR-970-3p 3L - 1555529 1555568 3'utr CG12099 FlyBase G25241.1 AGAGCTAGATGATGATCGCTTATGAAGTTACAAGATTTAT 6 1555548 0.950875887 4 6 39 1 1.079181246 0.166666667 0.5 0.75 6 0 0 12 3L:1555529-1555568 7 8 2134 FBgn0035232 2030.816667 84.03 129.1233333 0.003939302 0.095204094 0.061956269 6 -2 2 0.1 dme-miR-2a-2-5p 7mer-m8 TGATGAG 3L 15560836 15560842 + 3L_15560836_15560842_+ 0.651343976 0.655686182 0.653515079 0.003070399 AGO2 FBtr0075560|FBtr0331933|FBtr0075559 15560730|15560730|15560730 15561042|15561042|15561042 3L + 15560797 15560877 3'utr AGO2 FlyBase G30521.1 AAATATAAATTATGTAAAGGAGCATCTCTATTGATTCCATGATGAGCTATGATTTTAAAAGCCGCCTTGAGATGGTCCGCC 22 15560807 0.786331365 12 20 141 0.961538462 1.397940009 0.192307692 0.136363636 0.269230769 22 1 0 25 3L:15560797-15560877 7 AGO2 FBtr0075560|FBtr0331933|FBtr0075559 15560730|15560730|15560730 15561042|15561042|15561042 TGATGAG 7mer-m8 dme-miR-2a-2-5p 3L + 15560798 15560844 3'utr AGO2 FlyBase G23088.1 AATATAAATTATGTAAAGGAGCATCTCTATTGATTCCATGATGAGCT 13 15560807 0.877901483 6 10 92 0.764705882 1.113943352 0.176470588 0.307692308 0.470588235 13 4 0 13 3L:15560798-15560844 7 8.5 2135 FBgn0087035 9002.526667 265.6766667 406.73 0.000944179 0.031993777 0.020898385 29 29 29 0.1 dme-miR-318-3p 6mer2-7 CCAGTG 3L 15576211 15576216 + 3L_15576211_15576216_+ 0.934814424 0.993578728 0.964196576 0.041552635 dop FBtr0332091|FBtr0075562 15575752|15575752 15576313|15576313 3L + 15576164 15576231 3'utr dop FlyBase G30561.1 TAACGAATTGTGGACTATGGATGATAGTCGATGGGAGAGTCATGGAGCCAGTGGCGCGGTGTTGGGCT 12 15576206 0.925217209 4 11 65 1 1.146128036 0.5 0.083333333 0.214285714 12 0 0 14 3L:15576164-15576231 6 dop FBtr0332091|FBtr0075562 15575752|15575752 15576313|15576313 CCAGTG 6mer2-7 dme-miR-318-3p 3L + 15576167 15576225 3'utr dop FlyBase G23119.1 CGAATTGTGGACTATGGATGATAGTCGATGGGAGAGTCATGGAGCCAGTGGCGCGGTGT 6 15576205 0.961354981 4 6 32 1 1.176091259 0 0.666666667 0.866666667 6 0 0 15 3L:15576167-15576225 6 4.5 2136 FBgn0267390 1101.073333 17.43 26.69 0.004086921 0.258175559 0.168602473 5 6 5.5 0.1 dme-miR-14-3p 6mer3-8 AAGACT 3L 15603042 15603047 + 3L_15603042_15603047_+ 0.99999682 0.999996637 0.999996729 1.41E-07 RhoGAP71E FBtr0075568|FBtr0075567 15602556|15602699 15603119|15603119 3L + 15603027 15603054 3'utr RhoGAP71E FlyBase G30598.1 AATCAACAACACATTAAGACTTAAGAAT 7 15603041 0.960273592 2 5 24 0.625 0.698970004 0.5 0.142857143 0.25 7 3 0 5 3L:15603027-15603054 6 RhoGAP71E FBtr0075568|FBtr0075567 15602556|15602699 15603119|15603119 AAGACT 6mer3-8 dme-miR-14-3p 3L + 15603022 15603061 3'utr RhoGAP71E FlyBase G23138.1 ACAACAATCAACAACACATTAAGACTTAAGAATTTGAAGA 9 15603041 0.707234511 3 8 32 1 1.041392685 0.090909091 0.25 0.454545455 8 0 0 11 3L:15603022-15603061 6 6.5 2137 FBgn0036518 3855.043333 129.2366667 200.3833333 0.001686103 0.050295324 0.032437827 1 1 1 0.1 dme-miR-34-5p 6mer2-7 ACTGCC 3L 15606996 15607001 + 3L_15606996_15607001_+ 1 0.700184363 0.850092181 0.212001644 RhoGAP71E FBtr0290065|FBtr0332092|FBtr0303510 15606679|15604842|15606675 15609125|15609125|15609125 3L + 15606936 15607009 3'utr RhoGAP71E FlyBase G30606.1 AGCTGCAGGATCGGCCGTCGGTGTTCCGGTGCTAAACAAACCCCTACTGATGGTCGGCCTACTGCCGGGTGCCG 10 15606985 0.944190674 6 10 43 1 1.113943352 0.153846154 0.3 0.461538462 10 0 0 13 3L:15606936-15607009 6 RhoGAP71E FBtr0290065|FBtr0303510|FBtr0332092 15606679|15606675|15604842 15609125|15609125|15609125 ACTGCC 6mer2-7 dme-miR-34-5p 3L + 15606943 15606996 3'utr RhoGAP71E FlyBase G23145.1 GGATCGGCCGTCGGTGTTCCGGTGCTAAACAAACCCCTACTGATGGTCGGCCTA 6 15606983 0.948358068 4 6 28 1 0.903089987 0.25 0.333333333 0.5 6 0 0 8 3L:15606943-15606996 1 4 2138 FBgn0036518 3855.043333 129.2366667 200.3833333 0.001037602 0.030950969 0.01996174 11 13 12 0.1 dme-miR-999-3p 6mer3-8 AGTTAA 3L 15607454 15607459 + 3L_15607454_15607459_+ 0.925859725 0.946197647 0.936028686 0.014381067 RhoGAP71E FBtr0290065|FBtr0332093|FBtr0075569|FBtr0332092|FBtr0303510 15606679|15607124|15607124|15604842|15606675 15609125|15609125|15609125|15609125|15609125 3L + 15607347 15607465 3'utr RhoGAP71E FlyBase G30608.1 AAATCTCTGTAGATTTTGACGGCCCCTCTTGAAAACCATCATACATTAGGTTATGGTAAACGATATATGTATTTAATGTGTATAGCAAGAAAAGGCTGATTTTCTTTAGTTAAACAAAC 76 15607447 0.944335258 21 69 612 0.904761905 1.880813592 0.035714286 0.105263158 0.19047619 76 8 0 76 3L:15607347-15607465 6 RhoGAP71E FBtr0332093|FBtr0290065|FBtr0303510|FBtr0332092|FBtr0075569 15607124|15606679|15606675|15604842|15607124 15609125|15609125|15609125|15609125|15609125 AGTTAA 6mer3-8 dme-miR-999-3p 3L + 15607392 15607466 3'utr RhoGAP71E FlyBase G23147.1 TTAGGTTATGGTAAACGATATATGTATTTAATGTGTATAGCAAGAAAAGGCTGATTTTCTTTAGTTAAACAAACA 61 15607446 0.643722742 12 56 473 0.894736842 1.929418926 0.031578947 0.393442623 0.610526316 61 10 0 85 3L:15607392-15607466 6 20 2139 FBgn0036518 3855.043333 129.2366667 200.3833333 0.005188009 0.154754843 0.0998087 7 8 7.5 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3L 15607582 15607588 + 3L_15607582_15607588_+ 0.518479464 0.520830066 0.519654765 0.001662125 RhoGAP71E FBtr0290065|FBtr0332093|FBtr0075569|FBtr0332092|FBtr0303510 15606679|15607124|15607124|15604842|15606675 15609125|15609125|15609125|15609125|15609125 3L + 15607541 15607594 3'utr RhoGAP71E FlyBase G30609.1 TGCAACAAATTGCCAAATTTTATTCAGCATTCATTTCGTTGTGTGATTTAGGTT 7 15607588 0.991085839 3 7 70 1 1.041392685 0.090909091 0.571428571 0.727272727 7 0 0 11 3L:15607541-15607594 7 RhoGAP71E FBtr0332093|FBtr0290065|FBtr0303510|FBtr0332092|FBtr0075569 15607124|15606679|15606675|15604842|15607124 15609125|15609125|15609125|15609125|15609125 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 15607566 15607595 3'utr RhoGAP71E FlyBase G23148.1 AGCATTCATTTCGTTGTGTGATTTAGGTTG 7 15607588 0.766555008 2 7 77 1 1.113943352 0.384615385 0.571428571 0.769230769 7 0 0 13 3L:15607566-15607595 7 6 2140 FBgn0036518 3855.043333 129.2366667 200.3833333 0.001556403 0.046426453 0.02994261 -6 -6 -6 0.1 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3L 15608457 15608462 + 3L_15608457_15608462_+ 0.917655112 0.943097801 0.930376457 0.017990706 RhoGAP71E FBtr0290065|FBtr0332093|FBtr0075569|FBtr0332092|FBtr0303510 15606679|15607124|15607124|15604842|15606675 15609125|15609125|15609125|15609125|15609125 3L + 15608414 15608474 3'utr RhoGAP71E FlyBase G30613.1 TCTTTGCGAAGTTAGAGAAAGAAACAATTTCCTCCTCGCTGTGTTTGACCGACCACATTTG 10 15608458 0.981315789 7 10 70 1 1.204119983 0.125 0.3 0.5625 10 0 0 16 3L:15608414-15608474 6 RhoGAP71E FBtr0332093|FBtr0290065|FBtr0303510|FBtr0332092|FBtr0075569 15607124|15606679|15606675|15604842|15607124 15609125|15609125|15609125|15609125|15609125 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3L + 15608439 15608466 3'utr RhoGAP71E FlyBase G23150.1 AATTTCCTCCTCGCTGTGTTTGACCGAC 5 15608458 0.799343531 3 5 45 1 1 0.3 0.8 0.9 5 0 0 10 3L:15608439-15608466 6 6.5 2141 FBgn0036518 3855.043333 129.2366667 200.3833333 0.001686103 0.050295324 0.032437827 -1 -1 -1 0.1 dme-miR-33-5p 7mer-A1 AATGCAA 3L 15608650 15608656 + 3L_15608650_15608656_+ 0.78184233 0.781839162 0.781840746 2.19E-06 RhoGAP71E FBtr0290065|FBtr0332093|FBtr0075569|FBtr0332092|FBtr0303510 15606679|15607124|15607124|15604842|15606675 15609125|15609125|15609125|15609125|15609125 3L + 15608614 15608720 3'utr RhoGAP71E FlyBase G30615.1 AAAGCTCTGAATGTTGCCCAGAATTTAGGAATGAGAAATGCAAGAAACACCAATTTGTTGATTAGCAAAGCAAACAAAAAGAAGGTTAATTTTATCGACATCATTTT 242 15608652 0.993931616 7 240 394 0.996336996 2.434568904 0.025641026 0.119834711 0.21978022 242 1 0 272 3L:15608614-15608720 7 RhoGAP71E FBtr0332093|FBtr0290065|FBtr0303510|FBtr0332092|FBtr0075569 15607124|15606679|15606675|15604842|15607124 15609125|15609125|15609125|15609125|15609125 AATGCAA 7mer-A1 dme-miR-33-5p 3L + 15608614 15608672 3'utr RhoGAP71E FlyBase G23152.1 AAAGCTCTGAATGTTGCCCAGAATTTAGGAATGAGAAATGCAAGAAACACCAATTTGTT 155 15608652 0.997891332 2 155 252 1 2.365487985 0.012931034 0.348387097 0.564655172 155 0 0 232 3L:15608614-15608672 7 194.5 2142 FBgn0036518 3855.043333 129.2366667 200.3833333 0.050453389 1.504990844 0.970639607 -2 -2 -2 0.1 dme-miR-252-5p 6mer3-8 GTACTT 3L 15608796 15608801 - 3L_15608796_15608801_- 0.999998546 0.999983247 0.999990896 1.08E-05 CG7650 FBtr0075591 15608705 15609453 3L - 15608739 15608905 3'utr CG7650 FlyBase G36986.1 TGGAACAGATCCTGCTCACTAAATATAGCGTATATCTATAACGATTCTGTCATCATTTACAACACGATTTATATTTATGTAATAGTATTTAGTGGCTAATGAATGTACTTCACTCGAACTCGTACTCCGTAAGATTTATACAATTATATATTTTATAGCTTATAGCC 66 15608802 0.9856153 18 61 498 0.942528736 1.913813852 0.137931034 0.212121212 0.402298851 66 5 0 82 3L:15608739-15608905 6 CG7650 FBtr0075591 15608705 15609453 GTACTT 6mer3-8 dme-miR-252-5p 3L - 15608772 15608848 3'utr CG7650 FlyBase G27926.1 TACAACACGATTTATATTTATGTAATAGTATTTAGTGGCTAATGAATGTACTTCACTCGAACTCGTACTCCGTAAGA 41 15608802 0.983139447 6 38 297 0.967741935 1.77815125 0.14516129 0.317073171 0.548387097 41 2 0 60 3L:15608772-15608848 6 43.5 2143 FBgn0036519 328.6966667 23.90333333 36.63666667 0.132340861 1.81982987 1.187335092 1 1 1 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 15609176 15609182 - 3L_15609176_15609182_- 0.661610783 0.661611352 0.661611067 4.24E-07 CG7650 FBtr0075591 15608705 15609453 3L - 15609136 15609261 3'utr CG7650 FlyBase G36989.1 ACACGACTTCTTGGAATCTCCGAGTTACTTGTCAGTTTAAGCCAGGGCTTTAGAATTATACGCAAATTTTGACCAAATATGTGTTCGTAAGATTAGCATTTAAGAGAACTTAAGCCCGCCCTCCGT 81 15609182 0.876618309 18 75 704 0.930693069 1.672097858 0.138613861 0.209876543 0.366336634 81 6 1 94 3L:15609136-15609261 7 CG7650 FBtr0075591 15608705 15609453 TGTGTTC 7mer-m8 dme-miR-317-3p 3L - 15609137 15609288 3'utr CG7650 FlyBase G27928.1 TATAATTTGTATCAACAAAAGAAACTAACACGACTTCTTGGAATCTCCGAGTTACTTGTCAGTTTAAGCCAGGGCTTTAGAATTATACGCAAATTTTGACCAAATATGTGTTCGTAAGATTAGCATTTAAGAGAACTTAAGCCCGCCCTCCG 59 15609182 0.987765252 21 53 469 0.926315789 1.944482672 0.105263158 0.474576271 0.673684211 59 7 0 88 3L:15609137-15609288 7 42 2144 FBgn0036519 328.6966667 23.90333333 36.63666667 0.127777383 1.757077116 1.146392503 0 0 0 0.1 dme-miR-282-5p 6mer2-7 GAGGCT 3L 15609409 15609414 - 3L_15609409_15609414_- 0.708488449 0.474652598 0.591570523 0.16534688 CG7650 FBtr0075591 15608705 15609453 3L - 15609374 15609448 3'utr CG7650 FlyBase G36990.1 TAGCAAGGCTTATGAACTGACAAGTAACTTATTCGAGGCTTATCCCATGGCTGGACCTTTCAATGTATAGCTAAG 39 15609408 0.981546675 11 36 276 0.936170213 1.342422681 0.234042553 0.128205128 0.276595745 39 2 1 44 3L:15609374-15609448 6 CG7650 FBtr0075591 15608705 15609453 GAGGCT 6mer2-7 dme-miR-282-5p 3L - 15609388 15609444 3'utr CG7650 FlyBase G27929.1 AAGGCTTATGAACTGACAAGTAACTTATTCGAGGCTTATCCCATGGCTGGACCTTTC 15 15609408 0.782806768 8 14 86 0.909090909 1.301029996 0.227272727 0.4 0.590909091 15 2 0 20 3L:15609388-15609444 6 18.5 2145 FBgn0036519 328.6966667 23.90333333 36.63666667 0.056282895 0.773950635 0.504958602 -6 -6 -6 0.1 dme-miR-252-5p 6mer3-8 GTACTT 3L 15623068 15623073 + 3L_15623068_15623073_+ 0.999766655 0.99964895 0.999707802 8.33E-05 CG7372 FBtr0075570 15623010 15624130 3L + 15622976 15623095 stop_codon CG7372 FlyBase G30623.1 TACTTCACTGTCGTGGGTCAGCAGGCGGAAATTTAAAGACTTAAGTTCAGGGTCAGCAACACTTCTTACTCATTACATTTTAAGATGCCACTGTACTTGGAAATGATGGAGACATTTCCC 43 15623067 0.971179522 11 41 236 0.964285714 1.431363764 0.125 0.255813953 0.428571429 43 1 1 54 3L:15622976-15623095 6 CG7372 FBtr0075570 15623010 15624130 GTACTT 6mer3-8 dme-miR-252-5p 3L + 15622995 15623096 stop_codon CG7372 FlyBase G23159.1 AGCAGGCGGAAATTTAAAGACTTAAGTTCAGGGTCAGCAACACTTCTTACTCATTACATTTTAAGATGCCACTGTACTTGGAAATGATGGAGACATTTCCCT 33 15623067 0.976130648 10 32 202 0.97826087 1.653212514 0.304347826 0.272727273 0.47826087 33 1 0 45 3L:15622995-15623096 6 21 2146 FBgn0036522 715.7133333 20.76333333 31.90666667 0.029341356 1.011398298 0.658169662 1 1 1 0.1 dme-miR-8-3p 6mer2-7 AGTATT 3L 15623161 15623166 + 3L_15623161_15623166_+ 0.999990744 0.995477329 0.997734037 0.003191456 CG7372 FBtr0075570 15623010 15624130 3L + 15623124 15623172 3'utr CG7372 FlyBase G30624.1 TTTTTCGATTTAAAATGCAATCTTGCAGCAGGGATCAAGTATTTTCTAT 13 15623167 0.651479357 6 12 94 0.933333333 1.146128036 0.2 0.153846154 0.266666667 13 1 0 14 3L:15623124-15623172 6 CG7372 FBtr0075570 15623010 15624130 AGTATT 6mer2-7 dme-miR-8-3p 3L + 15623124 15623171 3'utr CG7372 FlyBase G23160.1 TTTTTCGATTTAAAATGCAATCTTGCAGCAGGGATCAAGTATTTTCTA 8 15623167 0.979456994 3 8 54 1 1.041392685 0.363636364 0.375 0.545454545 8 0 0 11 3L:15623124-15623171 6 7 2147 FBgn0036522 715.7133333 20.76333333 31.90666667 0.009780452 0.337132766 0.219389887 -6 -6 -6 0.1 dme-miR-1002-5p 6mer3-8 CTACTT 3L 15623273 15623278 + 3L_15623273_15623278_+ 0.437618392 0.469244788 0.45343159 0.022363242 CG7372 FBtr0075570 15623010 15624130 3L + 15623194 15623334 3'utr CG7372 FlyBase G30625.1 GATCTAATTTTGAGGATACGGTTAGCCGAGAATTATTCAACGTTGTGAAGGACATAAAGCCGACAAGAACAAGAAAAGACTACTTTATAAAAGAAATAATGATATTTGATATGAAGAAATCAAGCAAGAGACTGCAATGAG 25 15623277 0.989834989 10 23 108 0.935483871 1.462397998 0.387096774 0.2 0.35483871 25 2 0 29 3L:15623194-15623334 6 CG7372 FBtr0075570 15623010 15624130 CTACTT 6mer3-8 dme-miR-1002-5p 3L + 15623249 15623334 3'utr CG7372 FlyBase G23161.2 AAAGCCGACAAGAACAAGAAAAGACTACTTTATAAAAGAAATAATGATATTTGATATGAAGAAATCAAGCAAGAGACTGCAATGAG 17 15623277 0.951685341 5 13 45 0.869565217 1.301029996 0.217391304 0.294117647 0.47826087 17 3 0 20 3L:15623249-15623334 6 8 2148 FBgn0036522 715.7133333 20.76333333 31.90666667 0.01117766 0.38529459 0.2507313 -4 -4 -4 0.1 dme-miR-277-3p 7mer-A1 GCATTTA 3L 15623676 15623682 + 3L_15623676_15623682_+ 0.492267147 0.649629059 0.570948103 0.111271737 CG7372 FBtr0075570 15623010 15624130 3L + 15623643 15623686 3'utr CG7372 FlyBase G30628.1 TTGATTTGCAAACATATTCCTTCCATTCCCCCCGCATTTATAAT 34 15623668 0.842535895 2 34 315 1 1.579783597 0.026315789 0.088235294 0.184210526 34 0 0 38 3L:15623643-15623686 7 CG7372 FBtr0075570 15623010 15624130 GCATTTA 7mer-A1 dme-miR-277-3p 3L + 15623625 15623683 3'utr CG7372 FlyBase G23163.1 GCGCACACCGATTCGAATTTGATTTGCAAACATATTCCTTCCATTCCCCCCGCATTTAT 22 15623668 0.983237256 4 22 167 1 1.505149978 0.0625 0.454545455 0.625 22 0 0 32 3L:15623625-15623683 7 25 2149 FBgn0036522 715.7133333 20.76333333 31.90666667 0.034930186 1.204045593 0.783535311 8 8 8 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT 3L 15624067 15624073 + 3L_15624067_15624073_+ 0.6588882 0.658994203 0.658941202 7.50E-05 CG7372 FBtr0075570 15623010 15624130 3L + 15624025 15624104 3'utr CG7372 FlyBase G30630.1 TTTCCTACATACACTGAACGCATTTTTGTAAATTGAATTTGTGGCAGCTTCTCTCATTCTGTAGCATCTAAGAGAGTCCG 89 15624066 0.988220883 13 81 741 0.935185185 1.305351369 0.046296296 0.179775281 0.324074074 89 3 4 101 3L:15624025-15624104 7 CG7372 FBtr0075570 15623010 15624130 GGCAGCT 7mer-m8 dme-miR-980-3p 3L + 15624026 15624107 3'utr CG7372 FlyBase G23165.1 TTCCTACATACACTGAACGCATTTTTGTAAATTGAATTTGTGGCAGCTTCTCTCATTCTGTAGCATCTAAGAGAGTCCGATG 63 15624066 0.986406259 14 61 518 0.954545455 1.322219295 0.056818182 0.253968254 0.465909091 63 1 3 84 3L:15624026-15624107 7 70 2150 FBgn0036522 715.7133333 20.76333333 31.90666667 0.097804521 3.371327661 2.193898872 1 1 1 0.1 dme-miR-252-5p 7mer-m8 GTACTTA 3L 1574136 1574142 + 3L_1574136_1574142_+ 0.588291669 0.588246968 0.588269319 3.16E-05 CG12004 FBtr0072746|FBtr0072745 1574027|1574027 1574732|1574732 3L + 1574075 1574148 3'utr CG12004 FlyBase G27159.1 AATTGCAATCACAATTCCACATTTCCGAGCGGGACGCGATCCGAAAGCGAAGCAAACAAGTGTACTTATAGCCC 38 1574135 0.955006835 6 37 155 0.980392157 1.698970004 0.176470588 0.263157895 0.450980392 38 1 0 50 3L:1574075-1574148 7 CG12004 FBtr0072745|FBtr0072746 1574027|1574027 1574732|1574732 GTACTTA 7mer-m8 dme-miR-252-5p 3L + 1574091 1574148 3'utr CG12004 FlyBase G20557.1 CCACATTTCCGAGCGGGACGCGATCCGAAAGCGAAGCAAACAAGTGTACTTATAGCCC 13 1574135 0.957730548 2 12 52 0.882352941 0.698970004 0.117647059 0.307692308 0.470588235 13 0 2 15 3L:1574091-1574148 7 20.5 2151 FBgn0035236 1184.423333 63.35333333 97.16 0.017308001 0.323582027 0.210992178 1 1 1 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 3L 1574233 1574238 + 3L_1574233_1574238_+ 0.989700926 0.996860888 0.993280907 0.005062885 CG12004 FBtr0072746|FBtr0072746|FBtr0072745|FBtr0072745 1574027|1574027|1574027|1574027 1574732|1574732|1574732|1574732 3L + 1574203 1574290 3'utr CG12004 FlyBase G27160.1 AGAGGAAGATACGTACTAGGCCTAGTTACTTACTTACTCACTCCACAAAACGCTGAAAGCTGAACAGAAATTAACTTAGCCAGTCCAT 21 1574237 0.989704286 8 16 154 0.84 1.021189299 0 0.142857143 0.28 21 3 1 21 3L:1574203-1574290 6 CG12004 FBtr0072745|FBtr0072745|FBtr0072746|FBtr0072746 1574027|1574027|1574027|1574027 1574732|1574732|1574732|1574732 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 3L + 1574209 1574249 3'utr CG12004 FlyBase G20558.1 AGATACGTACTAGGCCTAGTTACTTACTTACTCACTCCACA 16 1574236 0.707351064 5 15 125 0.931034483 1.431363764 0 0.5 0.724137931 16 2 0 27 3L:1574209-1574249 6 16.5 2152 FBgn0035236 1184.423333 63.35333333 97.16 0.01393083 0.26044407 0.169822972 -4 -3 -3.5 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 3L 1574324 1574329 + 3L_1574324_1574329_+ 1 1 1 0 CG12004 FBtr0072746|FBtr0072745 1574027|1574027 1574732|1574732 3L + 1574311 1574418 3'utr CG12004 FlyBase G27161.1 TTGCCTCTGCGTCTGTGTTTCTGTATTTCCTACGTTTACACTCTACACCTAAACTTAAGCGTTTTTTAAAACAACTTATTTAGACGTTAGCTATGTACGAAACGAACT 24 1574324 0.963673178 12 23 184 0.962962963 1.414973348 0.259259259 0.125 0.222222222 24 1 0 26 3L:1574311-1574418 6 CG12004 FBtr0072745|FBtr0072746 1574027|1574027 1574732|1574732 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 1574308 1574362 3'utr CG12004 FlyBase G20560.1 GAGTTGCCTCTGCGTCTGTGTTTCTGTATTTCCTACGTTTACACTCTACACCTAA 13 1574328 0.991571634 9 12 132 1 1.322219295 0.095238095 0.538461538 0.714285714 13 0 0 21 3L:1574308-1574362 6 9.5 2153 FBgn0035236 1184.423333 63.35333333 97.16 0.008020781 0.149952647 0.097776863 0 -4 -2 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 1574571 1574576 + 3L_1574571_1574576_+ 0.886140044 0.886173105 0.886156575 2.34E-05 CG12004 FBtr0072746|FBtr0072745 1574027|1574027 1574732|1574732 3L + 1574548 1574594 3'utr CG12004 FlyBase G27162.2 GTGTTTCCGTTTCGCTCAAAGATACCAAAAACGAAGTTTTTCCTTCT 61 1574570 0.991018113 2 59 247 0.971830986 1.838849091 0.338028169 0.131147541 0.253521127 61 2 0 69 3L:1574548-1574594 6 CG12004 FBtr0072745|FBtr0072746 1574027|1574027 1574732|1574732 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 1574451 1574594 3'utr CG12004 FlyBase G20561.1 AAAGATTTTATTATACTGTATGCAACAATGGCAGTCGCTGAACAGGATTCCCCATTCAAGCGATCTTCAAGCTAGTTTCCCCTCAGCATTTATTTACGTGTTTCCGTTTCGCTCAAAGATACCAAAAACGAAGTTTTTCCTTCT 54 1574570 0.992811199 11 54 251 1 1.86332286 0.260273973 0.259259259 0.452054795 54 0 0 73 3L:1574451-1574594 6 48 2154 FBgn0035236 1184.423333 63.35333333 97.16 0.040526051 0.757655477 0.494030465 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 1574627 1574633 + 3L_1574627_1574633_+ 0.798876986 0.794959257 0.796918121 0.002770232 CG12004 FBtr0072746|FBtr0072746|FBtr0072746|FBtr0072745|FBtr0072745|FBtr0072745 1574027|1574027|1574027|1574027|1574027|1574027 1574732|1574732|1574732|1574732|1574732|1574732 3L + 1574614 1574645 3'utr CG12004 FlyBase G27163.1 TTGACCACCCTTTTGTGATAAGCTCTCGTCGT 94 1574625 0.710938974 4 87 718 0.941176471 1.204119983 0.235294118 0.234042553 0.394957983 94 1 6 112 3L:1574614-1574645 7 CG12004 FBtr0072745|FBtr0072745|FBtr0072745|FBtr0072746|FBtr0072746|FBtr0072746 1574027|1574027|1574027|1574027|1574027|1574027 1574732|1574732|1574732|1574732|1574732|1574732 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 1574602 1574645 3'utr CG12004 FlyBase G20562.1 TGATTTCCCCTTTTGACCACCCTTTTGTGATAAGCTCTCGTCGT 51 1574625 0.738337802 7 49 382 0.972222222 1.544068044 0.25 0.333333333 0.527777778 51 1 1 70 3L:1574602-1574645 7 72 2155 FBgn0035236 1184.423333 63.35333333 97.16 0.060789076 1.136483216 0.741045698 2 2 2 0.1 dme-bantam-3p 7mer-m8 TGATCTC 3L 15810495 15810501 - 3L_15810495_15810501_- 0.661562427 0.661306718 0.661434573 0.000180807 fwe FBtr0075542|FBtr0075541|FBtr0075543 15810079|15810079|15810079 15810703|15812758|15812207 3L - 15810450 15810515 3'utr fwe FlyBase G36998.1 AATCCGATTAGCTCTGATCTCTTTCTAGAGCAATCCAAATTACTCGATCAGAAAGAAGCCACCCAA 94 15810494 0.986133988 7 88 742 0.941176471 1.447158031 0.075630252 0.212765957 0.378151261 94 4 3 112 3L:15810450-15810515 7 fwe FBtr0075541|FBtr0075543|FBtr0075542 15810079|15810079|15810079 15812758|15812207|15810703 TGATCTC 7mer-m8 dme-bantam-3p 3L - 15810480 15810518 3'utr fwe FlyBase G27938.1 TTAAATCCGATTAGCTCTGATCTCTTTCTAGAGCAATCC 47 15810494 0.707231811 4 47 361 1 1.826074803 0.029850746 0.361702128 0.552238806 47 0 0 67 3L:15810480-15810518 7 70 2156 FBgn0261722 816.3866667 52.16 79.50666667 0.085743684 1.34202454 0.880429314 -7 -7 -7 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3L 15810702 15810708 - 3L_15810702_15810708_- 0.521223699 0.520864796 0.521044248 0.000253781 fwe FBtr0075541|FBtr0075543 15810079|15810079 15812758|15812207 3L - 15810687 15810778 stop_codon fwe FlyBase G36999.3 GATCGAGCGGGGATTGTGAACAACGCCCAGCCCTTCTCCTTCACCGGTGCCGTGGGCACGGACAGCAATGTGTGATTCAGAAGCTAGCTGAT 43 15810710 0.951120057 8 40 191 0.981481481 1.72427587 0.425925926 0.209302326 0.37037037 43 1 0 53 3L:15810687-15810778 7 fwe FBtr0075541|FBtr0075543 15810079|15810079 15812758|15812207 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 15810586 15810734 stop_codon fwe FlyBase G27939.1 CGGTGCCGTGGGCACGGACAGCAATGTGTGATTCAGAAGCTAGCTGATCGGGATTTCGAGGAATCGAAGAGCTGGGTGTGCCGTGAGAAAACAAGACTCAAAACGCAACATTTGAAGGGCAAACCTAACCAAGAGAACATCGGCAGGCA 43 15810710 0.952560008 14 41 179 0.970588235 1.51851394 0.441176471 0.441860465 0.647058824 43 1 1 66 3L:15810586-15810734 7 23.5 2157 FBgn0261722 816.3866667 52.16 79.50666667 0.028785379 0.45053681 0.295572698 2 2 2 0.1 dme-miR-317-3p 8mer-A1 TGTGTTCA 3L 15819805 15819812 - 3L_15819805_15819812_- 0.63113673 0.631136473 0.631136601 1.41E-07 DCP2 FBtr0304975 15818732 15821444 3L - 15819766 15820013 3'utr DCP2 FlyBase G37008.1 TTCCTATAATTCGTAAGCATGTCACGTTAGCATGTTAACTAATTCCTCCTTCAAACGTAGTCTCCAATGTGTGAAACAGTTGCCTATTAGCGTTTATCTTTAGACTAAGCAATGACCAGCAATGTCTCCAAGGTGGTAACATCAGAGCCAATAGGTTTACATCACCGAAAATCAAAAGAAGTTCCCTGTAACTCGGCCTTTTGTGTTCAATTCGAAAGTAGTTCTCTAAGCGTATCGGCCGAAAACAG 66 15819813 0.980954254 24 63 582 0.960526316 1.86332286 0.105263158 0.136363636 0.25 66 3 0 73 3L:15819766-15820013 8 DCP2 FBtr0304975 15818732 15821444 TGTGTTCA 8mer-A1 dme-miR-317-3p 3L - 15819755 15819834 3'utr DCP2 FlyBase G27947.1 AGTTCCCTGTAACTCGGCCTTTTGTGTTCAATTCGAAAGTAGTTCTCTAAGCGTATCGGCCGAAAACAGTAAGAAATTTG 24 15819813 0.987805672 9 24 214 1 1.544068044 0.228571429 0.333333333 0.542857143 24 0 0 35 3L:15819755-15819834 8 22 2158 FBgn0036534 5151.046667 115.94 176.9933333 0.004270977 0.189753321 0.124298467 1 1 1 0.1 dme-miR-980-3p 6mer3-8 GGCAGC 3L 15820319 15820324 - 3L_15820319_15820324_- 0.999892764 0.997898338 0.998895551 0.001410324 DCP2 FBtr0304975 15818732 15821444 3L - 15820283 15820383 3'utr DCP2 FlyBase G37010.1 ACACCGTTCGAAATGAAGAGCCACTTTCCCACAATCAGGGGCAATATCAGGCATATCTCGGCAGCAAAGTGTTTCGTCAATTTTTGATTGACCACTTGGGA 20 15820327 0.942434576 8 16 71 0.791666667 0.801632346 0.083333333 0.2 0.333333333 20 3 2 19 3L:15820283-15820383 6 DCP2 FBtr0304975 15818732 15821444 GGCAGC 6mer3-8 dme-miR-980-3p 3L - 15820265 15820347 3'utr DCP2 FlyBase G27950.1 AGGGGCAATATCAGGCATATCTCGGCAGCAAAGTGTTTCGTCAATTTTTGATTGACCACTTGGGAATGGGATTGTGAAGCTAA 15 15820328 0.973641092 9 12 78 0.857142857 0.77815125 0.238095238 0.266666667 0.476190476 15 1 2 18 3L:15820265-15820347 6 12 2159 FBgn0036534 5151.046667 115.94 176.9933333 0.002329624 0.103501811 0.067799164 3 4 3.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 3L 15820468 15820473 - 3L_15820468_15820473_- 0.983633782 0.976317872 0.979975827 0.005173123 DCP2 FBtr0304975 15818732 15821444 3L - 15820417 15820518 3'utr DCP2 FlyBase G37011.1 AATGTAAATAATTAAATTGTGATATAGTATTTCTTAGCACAATTGTGATCTTAGCAAACGGCTGGCAACTACAAAAACTTTTATAAGCGCAACCACAACACC 663 15820469 0.981746994 17 638 4683 0.958083832 1.823908741 0.032335329 0.214177979 0.376047904 663 24 11 800 3L:15820417-15820518 6 DCP2 FBtr0304975 15818732 15821444 TGATCT 6mer3-8 dme-bantam-3p 3L - 15820439 15820619 3'utr DCP2 FlyBase G27951.1 AAATAATATTTCCGGGCCGTATTACTTACTGCCCGCCCCCACCTATGAAAGTTAGACGAGAGAGGAGAGAAAGATGTGTAAGAAATATTACAAATAATAACAATGTAAATAATTAAATTGTGATATAGTATTTCTTAGCACAATTGTGATCTTAGCAAACGGCTGGCAACTACAAAAACTT 500 15820468 0.966631548 27 476 3364 0.951822917 1.96082739 0.029947917 0.406 0.61328125 500 30 7 731 3L:15820439-15820619 6 379.5 2160 FBgn0036534 5151.046667 115.94 176.9933333 0.073674347 3.273244782 2.144148556 -4 -5 -4.5 0.1 dme-miR-8-3p 7mer-A1 AGTATTA 3L 15830812 15830818 + 3L_15830812_15830818_+ 0.775019764 0.823344585 0.799182174 0.034170794 dbo FBtr0075505|FBtr0332133 15830491|15830602 15832004|15831660 3L + 15830770 15830890 3'utr dbo FlyBase G30648.1 TGGTAGAGCCTAAAGCGCATGTTTGTTAGACTTTTCCGGAATAGTATTAGAGTTAGCATTGTTCCCACGTTCACCTGCAATAACACATCCCCATCACTCCTGTGCGTAATTATATATGATT 57 15830803 0.88690586 15 56 508 0.985507246 1.832508913 0.115942029 0.192982456 0.333333333 57 1 0 68 3L:15830770-15830890 7 dbo FBtr0075505|FBtr0332133 15830491|15830602 15832004|15831660 AGTATTA 7mer-A1 dme-miR-8-3p 3L + 15830773 15830828 3'utr dbo FlyBase G23180.1 TAGAGCCTAAAGCGCATGTTTGTTAGACTTTTCCGGAATAGTATTAGAGTTAGCAT 37 15830803 0.987078166 11 35 316 1 1.770852012 0.305084746 0.324324324 0.576271186 37 0 0 59 3L:15830773-15830828 7 15 2161 FBgn0040230 498.9366667 16.79 25.68 0.030063936 0.893388922 0.58411215 9 9 9 0.1 dme-miR-14-3p 6mer2-7 AGACTG 3L 15956218 15956223 + 3L_15956218_15956223_+ 0.999912486 0.999992231 0.999952358 5.64E-05 GXIVsPLA2 FBtr0075509|FBtr0273189|FBtr0333572 15956052|15955390|15956052 15956252|15956252|15956465 3L + 15956181 15956253 3'utr GXIVsPLA2 FlyBase G30661.1 CATTATTGTATACCAAATAGTGGCATGCCAACGGTCCAGACTGTTAAATACATTGATATTTTTACCTATTATA 71 15956224 0.711175127 9 66 364 0.931034483 1.607455023 0.091954023 0.197183099 0.344827586 71 5 1 81 3L:15956181-15956253 6 GXIVsPLA2 FBtr0333572|FBtr0273189 15956052|15955390 15956465|15956252 AGACTG 6mer2-7 dme-miR-14-3p 3L + 15956187 15956265 3'utr GXIVsPLA2 FlyBase G23193.1 TGTATACCAAATAGTGGCATGCCAACGGTCCAGACTGTTAAATACATTGATATTTTTACCTATTATAAAGATGCTATAT 46 15956224 0.723541952 9 43 233 0.897058824 1.785329835 0.014705882 0.347826087 0.558823529 46 7 0 61 3L:15956187-15956265 6 52 2162 FBgn0036545 264.6666667 31.66 47.96 0.196473552 1.642451042 1.084236864 -6 -6 -6 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 3L 15958136 15958142 + 3L_15958136_15958142_+ 0.782852034 0.782884077 0.782868055 2.27E-05 elgi FBtr0075510|FBtr0333573 15957969|15957969 15958433|15958433 3L + 15958106 15958149 3'utr elgi FlyBase G30668.1 ATTCAAGCGCCTCATGACGACTTTCAAGTTGTACAAAAAATATA 8 15958134 0.967598524 2 8 44 1 1.113943352 0 0.375 0.615384615 8 0 0 13 3L:15958106-15958149 7 elgi FBtr0075510|FBtr0333573 15957969|15957969 15958433|15958433 GTACAAA 7mer-A1 dme-miR-305-5p 3L + 15958096 15958149 3'utr elgi FlyBase G23199.1 AAAACAAACCATTCAAGCGCCTCATGACGACTTTCAAGTTGTACAAAAAATATA 5 15958134 0.9768065 3 5 32 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3L:15958096-15958149 7 5.5 2163 FBgn0036546 86 6.756666667 10.27666667 0.063953488 0.814010853 0.535192994 2 2 2 0.1 dme-bantam-3p 7mer-A1 GATCTCA 3L 15958253 15958259 + 3L_15958253_15958259_+ 0.818453915 0.802958985 0.81070645 0.010956549 elgi FBtr0075510|FBtr0333573 15957969|15957969 15958433|15958433 3L + 15958240 15958274 3'utr elgi FlyBase G30669.1 TGTTTGATTAAGCGATCTCAACAAATGTCCCTTTG 12 15958247 0.75025161 4 12 79 1 1.255272505 0.111111111 0.416666667 0.611111111 12 0 0 18 3L:15958240-15958274 7 elgi FBtr0075510|FBtr0333573 15957969|15957969 15958433|15958433 GATCTCA 7mer-A1 dme-bantam-3p 3L + 15958242 15958326 3'utr elgi FlyBase G23200.1 TTTGATTAAGCGATCTCAACAAATGTCCCTTTGTTATCGTTCACTTCATTCTCATTTTGATGGAAGGAAGCTGTGAATGTCCTAA 14 15958247 0.977812943 6 11 79 0.904761905 1.278753601 0.142857143 0.5 0.666666667 14 2 0 19 3L:15958242-15958326 7 9.5 2164 FBgn0036546 86 6.756666667 10.27666667 0.110465116 1.406018747 0.924424262 6 6 6 0.1 dme-miR-968-5p 7mer-m8 ACTACTT 3L 15960891 15960897 - 3L_15960891_15960897_- 0.41272236 0.410041821 0.411382091 0.00189547 l(3)72Ab FBtr0075527 15960834 15960993 3L - 15960862 15960958 3'utr l(3)72Ab FlyBase G37050.1 AAATGAAAATCAATCATTTTACAATTTACGCGCATTAATTGTAGCAATAATAAATTCGTGTACTACTTTAGTAGAAACCAAATTGTACAAGGATACA 29 15960900 0.979470124 8 28 226 0.971428571 1.230448921 0 0.206896552 0.342857143 29 0 1 34 3L:15960862-15960958 7 l(3)72Ab FBtr0075527 15960834 15960993 ACTACTT 7mer-m8 dme-miR-968-5p 3L - 15960877 15960910 3'utr l(3)72Ab FlyBase G27974.1 AATAAATTCGTGTACTACTTTAGTAGAAACCAAA 10 15960900 0.807530463 2 9 74 1 1.113943352 0 0.3 0.461538462 10 0 0 13 3L:15960877-15960910 7 15.5 2165 FBgn0263599 2057.39 37.04 56.85333333 0.007533817 0.418466523 0.272631332 3 3 3 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3L 15984328 15984333 + 3L_15984328_15984333_+ 0.632339196 1 0.816169598 0.259975445 Arl1 FBtr0075517 15984183 15984362 3L + 15984202 15984362 3'utr Arl1 FlyBase G30679.1 AGACCCCCAGATCCCTGTGTAAAAAATGTGTGTCCAAAGCATCGCCAGCTAGGGAACGTCAACAGCTTTTTTCAAATTGCAGATTGCGCAAAAAATCCACGAACCGAAAGAAACTTTGTAATAACTTCTAGTAATATAATTATTAAATTATAGGATTAAAC 28 15984317 0.974372106 15 26 162 0.944444444 1.531478917 0.083333333 0.178571429 0.361111111 28 2 0 34 3L:15984202-15984362 6 Arl1 FBtr0075517 15984183 15984362 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 15984300 15984344 3'utr Arl1 FlyBase G23208.1 ACGAACCGAAAGAAACTTTGTAATAACTTCTAGTAATATAATTAT 6 15984317 0.979140454 3 6 41 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3L:15984300-15984344 6 5.5 2166 FBgn0000115 423.9933333 62.03666667 94.69666667 0.012971902 0.088657246 0.058080186 11 11 11 0.1 dme-miR-14-3p 6mer3-8 AAGACT 3L 15991617 15991622 + 3L_15991617_15991622_+ 0.76100761 0.739608034 0.750307822 0.015131802 Hip14 FBtr0075518|FBtr0333577|FBtr0330161 15990856|15990856|15990910 15991640|15992464|15991640 3L + 15991555 15991633 3'utr Hip14 FlyBase G30692.1 ACGCAACCTTCACAGCCGACAGCTCTCTAGGATCGACTACTTCGCTTCGGGAACGGCACGCAAAGACTTTTCAAATATC 21 15991624 0.92534402 4 20 72 0.956521739 1.342422681 0 0.095238095 0.173913043 21 1 0 22 3L:15991555-15991633 6 Hip14 FBtr0330161|FBtr0333577|FBtr0075518 15990910|15990856|15990856 15991640|15992464|15991640 AAGACT 6mer3-8 dme-miR-14-3p 3L + 15991561 15991629 3'utr Hip14 FlyBase G23217.1 CCTTCACAGCCGACAGCTCTCTAGGATCGACTACTTCGCTTCGGGAACGGCACGCAAAGACTTTTCAAA 20 15991624 0.931736388 3 19 75 0.931034483 1.431363764 0.034482759 0.3 0.517241379 20 2 0 27 3L:15991561-15991629 6 17.5 2167 FBgn0259824 761.04 23.55 36.16 0.022994849 0.743099788 0.483960177 -7 -7 -7 0.1 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3L 15991754 15991761 + 3L_15991754_15991761_+ 0.432268738 0.482348683 0.45730871 0.035411908 Hip14 FBtr0333577 15990856 15992464 3L + 15991741 15991780 3'utr Hip14 FlyBase G30694.1 AATTATGCACTAGTCTAGTCAGAAAATTATTTAAGTAAAA 29 15991751 0.716583706 8 25 207 0.875 1.447158031 0.125 0.103448276 0.1875 29 4 0 28 3L:15991741-15991780 8 Hip14 FBtr0333577 15990856 15992464 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L + 15991738 15991804 3'utr Hip14 FlyBase G23218.1 TCTAATTATGCACTAGTCTAGTCAGAAAATTATTTAAGTAAAATGTTAAAGTGCAACTACAGCCACA 25 15991752 0.819522677 9 23 148 0.888888889 1.505149978 0.027777778 0.32 0.527777778 25 4 0 32 3L:15991738-15991804 8 25 2168 FBgn0259824 761.04 23.55 36.16 0.032849785 1.061571125 0.691371681 3 2 2.5 0.1 dme-miR-283-5p 6mer3-8 TGATAT 3L 15994508 15994513 - 3L_15994508_15994513_- 0.999991587 0.999985142 0.999988365 4.60E-06 CG5830 FBtr0333579|FBtr0075521 15992667|15992667 15994730|15994730 3L - 15994469 15994525 3'utr CG5830 FlyBase G37117.1 ATAAGTTTTATATGATATACATAATTTTTACAGAACCCAATTTACACGGCACATTTG 13 15994510 0.857443896 3 12 118 0.933333333 0.84509804 0 0.153846154 0.266666667 13 0 1 14 3L:15994469-15994525 6 CG5830 FBtr0333579|FBtr0075521 15992667|15992667 15994730|15994730 TGATAT 6mer3-8 dme-miR-283-5p 3L - 15994473 15994523 3'utr CG5830 FlyBase G28017.1 AAGTTTTATATGATATACATAATTTTTACAGAACCCAATTTACACGGCACA 13 15994510 0.895769881 4 13 98 1 1.322219295 0.095238095 0.615384615 0.761904762 13 0 0 21 3L:15994473-15994523 6 8 2169 FBgn0036556 753.23 25.73 39.48333333 0.010620926 0.310921104 0.202617138 -3 -3 -3 0.1 dme-miR-283-5p 8mer-A1 TGATATTA 3L 1600369 1600376 + 3L_1600369_1600376_+ 0.589334186 0.552085716 0.570709951 0.026338667 CG13917 FBtr0072747|FBtr0333359|FBtr0347066 1599860|1599860|1599860 1600845|1600845|1600845 3L + 1600353 1600380 3'utr CG13917 FlyBase G27172.1 GAAAACAAGTATTTGGTGATATTATTTA 9 1600365 0.709440926 3 9 77 1 0.954242509 0.111111111 0 0 9 0 0 9 3L:1600353-1600380 8 CG13917 FBtr0347066|FBtr0333359|FBtr0072747 1599860|1599860|1599860 1600845|1600845|1600845 TGATATTA 8mer-A1 dme-miR-283-5p 3L + 1600352 1600381 3'utr CG13917 FlyBase G20573.1 TGAAAACAAGTATTTGGTGATATTATTTAG 10 1600365 0.789871277 3 9 89 0.941176471 0.903089987 0.117647059 0.4 0.647058824 10 0 1 16 3L:1600352-1600381 8 9.5 2170 FBgn0035237 346.41 5.056666667 7.816666667 0.027424151 1.878707976 1.215351812 4 4 4 0.1 dme-miR-970-3p 6mer3-8 TCTTAT 3L 16006592 16006597 - 3L_16006592_16006597_- 0.915064368 0.900891787 0.907978078 0.010021542 mib1 FBtr0075520|FBtr0333578 16006550|16006550 16006732|16006732 3L - 16006576 16006625 3'utr mib1 FlyBase G37128.1 TCATATATATAACTATATATCGGATTGGTCTTATAAAGCAAAAATATATT 55 16006601 0.984003367 4 55 461 1 1.84509804 0.014285714 0.236363636 0.4 55 0 0 70 3L:16006576-16006625 6 mib1 FBtr0075520|FBtr0333578 16006550|16006550 16006732|16006732 TCTTAT 6mer3-8 dme-miR-970-3p 3L - 16006576 16006626 3'utr mib1 FlyBase G28027.1 ATCATATATATAACTATATATCGGATTGGTCTTATAAAGCAAAAATATATT 47 16006601 0.983104436 3 47 377 1 1.880813592 0 0.446808511 0.657894737 47 0 0 76 3L:16006576-16006626 6 51 2171 FBgn0263601 566.1 17.78333333 27.41 0.09009009 2.867853796 1.860634805 4 4 4 0.1 dme-miR-970-3p 6mer3-8 TCTTAT 3L 16006650 16006655 - 3L_16006650_16006655_- 0.999680553 0.999668429 0.999674491 8.63E-06 mib1 FBtr0075520|FBtr0333578 16006550|16006550 16006732|16006732 3L - 16006644 16006694 3'utr mib1 FlyBase G37129.1 ACAGCCTTCGAAGTATTAGGATATTTAAAGGACTCACATTCTTATACACAC 15 16006656 0.738583091 4 12 72 0.882352941 0.698970004 0.058823529 0.214285714 0.352941176 14 0 2 15 3L:16006644-16006694 6 mib1 FBtr0075520|FBtr0333578 16006550|16006550 16006732|16006732 TCTTAT 6mer3-8 dme-miR-970-3p 3L - 16006630 16006669 3'utr mib1 FlyBase G28028.1 TAAAGGACTCACATTCTTATACACACATATATACACACAC 18 16006656 0.9697424 2 17 90 0.961538462 1.397940009 0 0.333333333 0.538461538 18 1 0 25 3L:16006630-16006669 6 12.5 2172 FBgn0263601 566.1 17.78333333 27.41 0.022080904 0.702905342 0.456037942 1 1 1 0.1 dme-miR-14-3p 7mer-m8 AAGACTG 3L 16032018 16032024 + 3L_16032018_16032024_+ 0.667405146 0.666482413 0.666943779 0.000652447 Notum FBtr0075435 16031340 16032752 3L + 16031971 16032032 3'utr Notum FlyBase G30708.1 AAGAAATGAAATCTGCTTAACGAGAAACTAAACACAAATGCAACCACAAGACTGTTTTTATG 150 16032025 0.892442159 11 147 748 0.974619289 2.283301229 0.025380711 0.246666667 0.426395939 150 5 0 192 3L:16031971-16032032 7 Notum FBtr0075435 16031340 16032752 AAGACTG 7mer-m8 dme-miR-14-3p 3L + 16031969 16032032 3'utr Notum FlyBase G23228.1 CAAAGAAATGAAATCTGCTTAACGAGAAACTAAACACAAATGCAACCACAAGACTGTTTTTATG 109 16032025 0.819916531 9 105 582 0.96969697 2.204119983 0.048484848 0.403669725 0.606060606 109 5 0 160 3L:16031969-16032032 7 112 2173 FBgn0044028 1178.056667 37.54333333 57.65 0.095071827 2.983219391 1.942758023 -7 -7 -7 0.1 dme-miR-14-3p 6mer2-7 AGACTG 3L 16032172 16032177 + 3L_16032172_16032177_+ 1 0.99999888 0.99999944 7.78E-07 Notum FBtr0075435 16031340 16032752 3L + 16032126 16032196 3'utr Notum FlyBase G30709.1 TTGATAGTTTATGACCCGTTTAGGATTTTACTTGTGTGTGGAATCTAGACTGTTTCAAATGCCCCACGCAT 66 16032178 0.672011488 11 61 544 0.965116279 1.618048097 0.104651163 0.227272727 0.406976744 66 2 1 83 3L:16032126-16032196 6 Notum FBtr0075435 16031340 16032752 AGACTG 6mer2-7 dme-miR-14-3p 3L + 16032121 16032196 3'utr Notum FlyBase G23229.1 TTTATTTGATAGTTTATGACCCGTTTAGGATTTTACTTGTGTGTGGAATCTAGACTGTTTCAAATGCCCCACGCAT 53 16032178 0.930040603 12 49 453 0.925925926 1.875061263 0.135802469 0.41509434 0.617283951 53 6 0 75 3L:16032121-16032196 6 46.5 2174 FBgn0044028 1178.056667 37.54333333 57.65 0.039471785 1.238568765 0.8065915 -6 -6 -6 0.1 dme-miR-190-5p 8mer-A1 ACATATCA 3L 16032302 16032309 + 3L_16032302_16032309_+ 0.604162353 0.357787526 0.480974939 0.174213363 Notum FBtr0075435 16031340 16032752 3L + 16032243 16032336 3'utr Notum FlyBase G30710.1 TTATTTTGTACCTACCTCAGATCAGTAAGAATGAATGAAATTGATAAACAGCTGCCTTCACATATCATTGCGTACCTGTGCAACGAAAATCAAA 38 16032311 0.971031106 9 38 223 1 1.612783857 0.195121951 0.078947368 0.146341463 38 0 0 41 3L:16032243-16032336 8 Notum FBtr0075435 16031340 16032752 ACATATCA 8mer-A1 dme-miR-190-5p 3L + 16032241 16032368 3'utr Notum FlyBase G23230.1 ATTTATTTTGTACCTACCTCAGATCAGTAAGAATGAATGAAATTGATAAACAGCTGCCTTCACATATCATTGCGTACCTGTGCAACGAAAATCAAATACTTAATACTTAACTTAATACCGCCCGCATT 39 16032310 0.922475075 12 38 215 0.983606557 1.77815125 0.098360656 0.461538462 0.655737705 39 1 0 60 3L:16032241-16032368 8 20.5 2175 FBgn0044028 1178.056667 37.54333333 57.65 0.01740154 0.546035692 0.355594102 -9 -8 -8.5 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 16032591 16032598 + 3L_16032591_16032598_+ 0.500109281 0.500106399 0.50010784 2.05E-06 Notum FBtr0075435 16031340 16032752 3L + 16032548 16032666 3'utr Notum FlyBase G30712.1 AAGCCTGTACAGAACTGGTTGAAGTTTAGCCCTAAGAATTGTTGTACTTAAACTTAGTGATAATCATAAACGTAATGCAATTCGCAAGCTTATTAGCTTTTGTTAGCGTTCTTCAAATG 87 16032590 0.972755261 10 82 776 0.951923077 1.995635195 0.115384615 0.16091954 0.298076923 87 5 0 99 3L:16032548-16032666 8 Notum FBtr0075435 16031340 16032752 GTACTTAA 8mer-A1 dme-miR-252-5p 3L + 16032544 16032617 3'utr Notum FlyBase G23231.1 TGCTAAGCCTGTACAGAACTGGTTGAAGTTTAGCCCTAAGAATTGTTGTACTTAAACTTAGTGATAATCATAAA 58 16032590 0.75971643 8 57 519 0.97752809 1.939519253 0.078651685 0.396551724 0.606741573 58 2 0 87 3L:16032544-16032617 8 61 2176 FBgn0044028 1178.056667 37.54333333 57.65 0.051780192 1.624789133 1.05810928 1 1 1 0.1 dme-miR-1007-3p 6mer3-8 TGAGCT 3L 16079246 16079251 + 3L_16079246_16079251_+ 0.999991667 0.999863881 0.999927774 9.04E-05 Mbs FBtr0333616|FBtr0308216|FBtr0075441 16078935|16063314|16078935 16079589|16079589|16079589 3L + 16079226 16079279 3'utr Mbs FlyBase G30734.1 AGCTAAAATTAAGTTCACATTGAGCTCATTGGCTTTGGACTGGTCACTGGTAAT 26 16079245 0.927387724 5 26 199 1 1.491361694 0.419354839 0.192307692 0.322580645 26 0 0 31 3L:16079226-16079279 6 Mbs FBtr0308216|FBtr0075441|FBtr0333616 16063314|16078935|16078935 16079589|16079589|16079589 TGAGCT 6mer3-8 dme-miR-1007-3p 3L + 16079231 16079268 3'utr Mbs FlyBase G23250.1 AAATTAAGTTCACATTGAGCTCATTGGCTTTGGACTGG 15 16079245 0.813225365 2 15 104 1 1.230448921 0.705882353 0.133333333 0.235294118 15 0 0 17 3L:16079231-16079268 6 20.5 2177 FBgn0005536 2947.596667 72.49666667 111.4433333 0.006954819 0.282771622 0.18394999 1 1 1 0.1 dme-miR-1003-3p 7mer-A1 TGTGAGA 3L 16081969 16081975 + 3L_16081969_16081975_+ 0.823344501 0.823349358 0.82334693 3.46E-06 Mbs FBtr0112852|FBtr0112851|FBtr0301575|FBtr0301473|FBtr0308213|FBtr0308214|FBtr0301472|FBtr0308215|FBtr0112850 16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844 16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026 3L + 16081862 16081986 3'utr Mbs FlyBase G30741.2 CTGTTATTTATTAAATTCGCCTAAGAGATTTTGTGTTACTCGTAAATGGAAACGATAATCAAGCATAAACAACCATAAGAACGTGAATTGTGTAATATGTAAAATTGTGTGAGAAAATATTTATG 128 16081967 0.741365912 19 120 976 0.97260274 1.851258349 0.164383562 0.134920635 0.253424658 126 3 1 142 3L:16081862-16081986 7 Mbs FBtr0301472|FBtr0308215|FBtr0112850|FBtr0308214|FBtr0301473|FBtr0308213|FBtr0112852|FBtr0112851|FBtr0301575 16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844 16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026 TGTGAGA 7mer-A1 dme-miR-1003-3p 3L + 16081929 16082033 3'utr Mbs FlyBase G23257.1 AACAACCATAAGAACGTGAATTGTGTAATATGTAAAATTGTGTGAGAAAATATTTATGAAAATTTGATTCAAATACGAAACTTAATAAATGTGATCGCAAGCAAA 94 16081967 0.803345873 11 91 629 0.970149254 2.113943352 0.052238806 0.35106383 0.544776119 94 4 0 130 3L:16081929-16082033 7 58 2178 FBgn0005536 2947.596667 72.49666667 111.4433333 0.019677048 0.800036783 0.520443873 2 2 2 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 16082018 16082023 + 3L_16082018_16082023_+ 0.730767895 0.728641213 0.729704554 0.001503804 Mbs FBtr0112852|FBtr0112852|FBtr0112852|FBtr0112851|FBtr0112851|FBtr0112851|FBtr0301575|FBtr0301575|FBtr0301575|FBtr0301473|FBtr0301473|FBtr0301473|FBtr0308213|FBtr0308213|FBtr0308213|FBtr0308214|FBtr0308214|FBtr0308214|FBtr0301472|FBtr0301472|FBtr0301472|FBtr0308215|FBtr0308215|FBtr0308215|FBtr0112850|FBtr0112850|FBtr0112850 16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844 16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026 3L + 16081988 16082033 3'utr Mbs FlyBase G30741.3 AAATTTGATTCAAATACGAAACTTAATAAATGTGATCGCAAGCAAA 84 16082014 0.791304106 7 80 450 0.96 1.380211242 0.05 0.154761905 0.29 84 1 3 96 3L:16081988-16082033 6 Mbs FBtr0301472|FBtr0301472|FBtr0301472|FBtr0308215|FBtr0308215|FBtr0308215|FBtr0112850|FBtr0112850|FBtr0112850|FBtr0308214|FBtr0308214|FBtr0308214|FBtr0301473|FBtr0301473|FBtr0301473|FBtr0308213|FBtr0308213|FBtr0308213|FBtr0112852|FBtr0112852|FBtr0112852|FBtr0112851|FBtr0112851|FBtr0112851|FBtr0301575|FBtr0301575|FBtr0301575 16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844 16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 16081929 16082033 3'utr Mbs FlyBase G23257.1 AACAACCATAAGAACGTGAATTGTGTAATATGTAAAATTGTGTGAGAAAATATTTATGAAAATTTGATTCAAATACGAAACTTAATAAATGTGATCGCAAGCAAA 94 16082014 0.803345873 11 91 629 0.970149254 2.113943352 0.052238806 0.35106383 0.544776119 94 4 0 130 3L:16081929-16082033 6 60 2179 FBgn0005536 2947.596667 72.49666667 111.4433333 0.020355567 0.827624259 0.538390213 4 4 4 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 16088030 16088035 - 3L_16088030_16088035_- 0.999005677 0.999618947 0.999312312 0.000433598 CG5235 FBtr0333599|FBtr0075497 16087815|16087625 16088100|16088100 3L - 16087993 16088083 3'utr CG5235 FlyBase G37169.1 AAGTATTATTTAAGCCATCCAAAACGTTTTCAGTGAAAATGCTAGCTTACCAAATGAACGATTATCAAATATTCAAAATTATTCTCGTAAT 50 16088036 0.959429883 6 49 242 0.969230769 1.799340549 0.123076923 0.24 0.415384615 50 2 0 63 3L:16087993-16088083 6 CG5235 FBtr0333599|FBtr0075497 16087815|16087625 16088100|16088100 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 16087994 16088058 3'utr CG5235 FlyBase G28067.1 GTTTTCAGTGAAAATGCTAGCTTACCAAATGAACGATTATCAAATATTCAAAATTATTCTCGTAA 36 16088036 0.964036869 8 34 177 0.944444444 1.707570176 0.166666667 0.472222222 0.648148148 36 3 0 51 3L:16087994-16088058 6 39 2180 FBgn0036565 1024 48.82333333 74.77 0.038085938 0.798798389 0.521599572 1 1 1 0.1 dme-bantam-3p 6mer3-8 TGATCT 3L 16095599 16095604 + 3L_16095599_16095604_+ 0.999999996 0.999999905 0.999999951 7.07E-08 ClC-c FBtr0333598|FBtr0302503|FBtr0075444 16095195|16095195|16095195 16096151|16095854|16095854 3L + 16095564 16095621 3'utr ClC-c FlyBase G30759.1 TATATGTTCACATACAGCTTGATAACACTATGAAATGATCTATAGTTGTAAAAGGAAC 15 16095600 0.742966812 6 15 111 1 1.230448921 0.411764706 0.133333333 0.235294118 15 0 0 17 3L:16095564-16095621 6 ClC-c FBtr0075444|FBtr0302503|FBtr0333598 16095195|16095195|16095195 16095854|16095854|16096151 TGATCT 6mer3-8 dme-bantam-3p 3L + 16095577 16095618 3'utr ClC-c FlyBase G23268.1 ACAGCTTGATAACACTATGAAATGATCTATAGTTGTAAAAGG 12 16095599 0.985004114 3 10 81 0.894736842 1.230448921 0.421052632 0.5 0.684210526 12 2 0 17 3L:16095577-16095618 6 12.5 2181 FBgn0036566 804.2333333 24.65333333 37.96666667 0.015542753 0.507030827 0.329236172 -1 0 -0.5 0.1 dme-miR-7-5p 6mer3-8 GTCTTC 3L 16120100 16120105 + 3L_16120100_16120105_+ 0.950215989 0.996873366 0.973544678 0.032991764 Taf4 FBtr0075449|FBtr0301911|FBtr0075450|FBtr0075448|FBtr0333291|FBtr0333290|FBtr0114589|FBtr0345951|FBtr0075451 16120071|16120071|16120071|16120071|16120071|16120071|16120071|16120071|16120071 16121368|16121368|16121368|16121651|16121368|16121368|16121368|16121368|16121368 3L + 16120033 16120259 stop_codon Taf4 FlyBase G30782.1 CTGTCGCAGTTCCATGCTGTTCAAGACATACCTCAAGTGATCGCTGCTGTTGCCCATCAATCGCACCGTCTTCTCCTCGCCGATCCTCCTACTCCGTGGACTGTCGTGTTGTTGTTTTATACAGCTTTACGATTTCATCCACTTGCAATATATTTTAGCCTCAACTTTAAATGCGTCGCGTGTCCCCTGTTGTTGTTTCTTTTTAGTTAGGCGGCTCTATTTAATTT 73 16120070 0.778829661 32 68 558 0.9 1.908485019 0.211111111 0.191780822 0.344444444 73 9 0 81 3L:16120033-16120259 6 Taf4 FBtr0333291|FBtr0114589|FBtr0333290|FBtr0345951|FBtr0075451|FBtr0075449|FBtr0301911|FBtr0075450|FBtr0075448 16120071|16120071|16120071|16120071|16120071|16120071|16120071|16120071|16120071 16121368|16121368|16121368|16121368|16121368|16121368|16121368|16121368|16121651 GTCTTC 6mer3-8 dme-miR-7-5p 3L + 16120055 16120146 stop_codon Taf4 FlyBase G23285.1 AAGACATACCTCAAGTGATCGCTGCTGTTGCCCATCAATCGCACCGTCTTCTCCTCGCCGATCCTCCTACTCCGTGGACTGTCGTGTTGTTG 32 16120105 0.715522479 13 29 215 0.88 1.643452676 0.24 0.5 0.68 32 6 0 44 3L:16120055-16120146 6 12.5 2182 FBgn0010280 2452.246667 62.76333333 96.23333333 0.005097366 0.199160869 0.129892622 30 -5 12.5 0.1 dme-miR-13b-2-5p 6mer2-7 TTGACG 3L 16120513 16120518 + 3L_16120513_16120518_+ 0.989050091 0.998272853 0.993661472 0.006521504 Taf4 FBtr0075449|FBtr0301911|FBtr0075450|FBtr0075448|FBtr0333291|FBtr0333290|FBtr0114589|FBtr0345951|FBtr0075451 16120071|16120071|16120071|16120071|16120071|16120071|16120071|16120071|16120071 16121368|16121368|16121368|16121651|16121368|16121368|16121368|16121368|16121368 3L + 16120493 16120545 3'utr Taf4 FlyBase G30785.1 TAATGTTTGCATCAACTGCATTGACGGCCTTATCTAAACGATATAAACATAAT 17 16120523 0.717692008 6 16 112 0.909090909 1.301029996 0.045454545 0.294117647 0.454545455 17 2 0 20 3L:16120493-16120545 6 Taf4 FBtr0333291|FBtr0114589|FBtr0333290|FBtr0345951|FBtr0075451|FBtr0075449|FBtr0301911|FBtr0075450|FBtr0075448 16120071|16120071|16120071|16120071|16120071|16120071|16120071|16120071|16120071 16121368|16121368|16121368|16121368|16121368|16121368|16121368|16121368|16121651 TTGACG 6mer2-7 dme-miR-13b-2-5p 3L + 16120501 16120535 3'utr Taf4 FlyBase G23289.1 GCATCAACTGCATTGACGGCCTTATCTAAACGATA 5 16120522 0.690117559 3 4 27 0.7 0.84509804 0 0.4 0.7 5 3 0 7 3L:16120501-16120535 6 10 2183 FBgn0010280 2452.246667 62.76333333 96.23333333 0.004077893 0.159328695 0.103914098 -10 -9 -9.5 0.1 dme-miR-999-3p 6mer3-8 AGTTAA 3L 16121480 16121485 + 3L_16121480_16121485_+ 0.999999986 0.999999924 0.999999955 7.07E-08 Taf4 FBtr0075448 16120071 16121651 3L + 16121448 16121495 3'utr Taf4 FlyBase G30794.2 TTTATGTCGTATGGAATATGTAACGGTATCTCAGTTAATTAGCTAGTT 12 16121482 0.987204677 5 8 99 0.722222222 1.113943352 0.055555556 0.333333333 0.555555556 12 5 0 13 3L:16121448-16121495 6 Taf4 FBtr0075448 16120071 16121651 AGTTAA 6mer3-8 dme-miR-999-3p 3L + 16121451 16121500 3'utr Taf4 FlyBase G23296.1 ATGTCGTATGGAATATGTAACGGTATCTCAGTTAATTAGCTAGTTAAATC 11 16121482 0.989439887 4 8 91 0.705882353 1.079181246 0 0.363636364 0.588235294 11 5 0 12 3L:16121451-16121500 6 9.5 2184 FBgn0010280 2452.246667 62.76333333 96.23333333 0.003873999 0.15136226 0.098718393 -2 -2 -2 0.1 dme-miR-92b-3p 7mer-m1 TGCAATT 3L 16136528 16136534 + 3L_16136528_16136534_+ 0.765585819 0.76543309 0.765509454 0.000107975 elg1 FBtr0089714|FBtr0307518|FBtr0089713 16136465|16136465|16136465 16136691|16136691|16136691 3L + 16136497 16136538 3'utr elg1 FlyBase G30828.1 AAATTGGTGGAGCAGCTCCGCCGGCTTTGTTTGCAATTTATT 10 16136526 0.836103498 6 10 63 1 1.176091259 0.266666667 0.3 0.533333333 10 0 0 15 3L:16136497-16136538 7 elg1 FBtr0089714|FBtr0307518|FBtr0089713 16136465|16136465|16136465 16136691|16136691|16136691 TGCAATT 7mer-m1 dme-miR-92b-3p 3L + 16136493 16136529 3'utr elg1 FlyBase G23321.1 TTTGAAATTGGTGGAGCAGCTCCGCCGGCTTTGTTTG 5 16136525 0.860100951 4 5 34 1 0.77815125 0.666666667 0.2 0.333333333 5 0 0 6 3L:16136493-16136529 2 4.5 2185 FBgn0036574 878.6533333 25.39 38.88333333 0.005121474 0.177235132 0.115730819 2 3 2.5 0.1 dme-miR-304-5p 6mer3-8 TGAGAT 3L 16136604 16136609 + 3L_16136604_16136609_+ 0.990912516 0.999993789 0.995453152 0.006421449 elg1 FBtr0089714|FBtr0307518|FBtr0089713 16136465|16136465|16136465 16136691|16136691|16136691 3L + 16136539 16136668 3'utr elg1 FlyBase G30829.1 CAGATCGTTTAAGAAGAGTTGATCTTTTTTAAGATAGCTTTGTGGACATGAAGATGTAGCTATTATGAGATAAACCTAGAACTATTTACAATTTAACTATGATAAACTAACTACGACCTCATCCTATGTT 16 16136604 0.980340902 11 15 115 0.952380952 1 0.047619048 0.1875 0.380952381 16 0 1 20 3L:16136539-16136668 6 elg1 FBtr0089714|FBtr0307518|FBtr0089713 16136465|16136465|16136465 16136691|16136691|16136691 TGAGAT 6mer3-8 dme-miR-304-5p 3L + 16136579 16136610 3'utr elg1 FlyBase G23322.1 TGTGGACATGAAGATGTAGCTATTATGAGATA 6 16136601 0.989423315 3 4 37 0.75 0.77815125 0 0.166666667 0.375 6 2 0 6 3L:16136579-16136610 6 4 2186 FBgn0036574 878.6533333 25.39 38.88333333 0.004552421 0.15754234 0.102871839 0 3 1.5 0.1 dme-miR-932-5p 6mer3-8 GGAATT 3L 16139512 16139517 - 3L_16139512_16139517_- 0.999999999 1 1 0 CG5151 FBtr0307521|FBtr0346525|FBtr0307519|FBtr0307520 16137800|16139499|16139499|16139499 16140460|16140460|16140460|16140460 3L - 16139506 16139553 3'utr CG5151 FlyBase G37208.1 AGTTCAATTGAAATTTGTATTTGTATATTTGCTAACGGAATTACGATG 8 16139541 0.992229324 7 7 78 0.888888889 0.903089987 0.222222222 0.125 0.222222222 8 1 0 8 3L:16139506-16139553 6 CG5151 FBtr0307519|FBtr0307520|FBtr0307521|FBtr0346525 16139499|16139499|16137800|16139499 16140460|16140460|16140460|16140460 GGAATT 6mer3-8 dme-miR-932-5p 3L - 16139509 16139562 3'utr CG5151 FlyBase G28094.1 ACAATTTTTAGTTCAATTGAAATTTGTATTTGTATATTTGCTAACGGAATTACG 7 16139539 0.992576415 6 7 78 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3L:16139509-16139562 6 2 2187 FBgn0036576 611.6966667 13.02666667 19.93 0.003269594 0.153531218 0.100351229 24 22 23 0.1 dme-miR-14-3p 7mer-m8 AAGACTG 3L 16140053 16140059 - 3L_16140053_16140059_- 0.658836692 0.657805415 0.658321054 0.000729239 CG5151 FBtr0307521|FBtr0346525|FBtr0307519|FBtr0307520 16137800|16139499|16139499|16139499 16140460|16140460|16140460|16140460 3L - 16139886 16140090 3'utr CG5151 FlyBase G37209.2 GGTCTGTCGCCAACTTTTGCGCTGGTACGAAAAGACTGTTTATTAGTCAGAATTTAATTTGTAAATTTGAGTAACGAGAGGAAAGAAAAGTTAGAGAATGATACGGAGAAGACATATGTATAGTTGCGCTGCCGCCTTTTAAGCACTCACCACAGACCGTAGAAGGTTCATTTTTAAGTTATGTAACATTATTTCCATTCGTCGC 969 16140052 0.911593735 43 919 5163 0.969949917 2.463146137 0.293823038 0.187822497 0.343071786 969 33 3 1162 3L:16139886-16140090 7 CG5151 FBtr0307519|FBtr0307520|FBtr0307521|FBtr0346525 16139499|16139499|16137800|16139499 16140460|16140460|16140460|16140460 AAGACTG 7mer-m8 dme-miR-14-3p 3L - 16140032 16140083 3'utr CG5151 FlyBase G28098.2 CGCCAACTTTTGCGCTGGTACGAAAAGACTGTTTATTAGTCAGAATTTAATT 515 16140052 0.634607789 12 478 3252 0.966292135 2.043642921 0.324594257 0.390291262 0.607990012 515 21 6 774 3L:16140032-16140083 7 516.5 2188 FBgn0036576 611.6966667 13.02666667 19.93 0.844372756 39.64943705 25.91570497 -7 -7 -7 0.1 dme-miR-14-3p 6mer3-8 AAGACT 3L 16140335 16140340 - 3L_16140335_16140340_- 0.987264325 0.850050491 0.918657408 0.097024808 CG5151 FBtr0307521|FBtr0346525|FBtr0307519|FBtr0307520 16137800|16139499|16139499|16139499 16140460|16140460|16140460|16140460 3L - 16140235 16140374 3'utr CG5151 FlyBase G37210.2 CAGTTCACTAGCCGATTTGAACTTCTCAAACCGTAAGACTTTGCATGGTATTTGATCATAATTTGTAAACTTACCGCAGGTCTTGTGTCTAAAAAGCTTTACTTGAGGTAAAATATTGCCAAATTTAGTGAAATACTTAT 110 16140333 0.728871046 29 104 808 0.949640288 1.421603927 0.237410072 0.227272727 0.388489209 110 3 4 132 3L:16140235-16140374 6 CG5151 FBtr0307519|FBtr0307520|FBtr0307521|FBtr0346525 16139499|16139499|16137800|16139499 16140460|16140460|16140460|16140460 AAGACT 6mer3-8 dme-miR-14-3p 3L - 16140298 16140532 stop_codon CG5151 FlyBase G28099.2 AACTCTAGCATGATGAGCTACCACTGCAGCTGCAATGGCCGAAATTGCAGCCACTGTGCGGCCAACTCATAACTGAGCTCGTGTTAAGTTTAACTACATTAAACAAATCTGGTGGTGCGGAAACCACTGGAGATTTTAGAACATTAGTTAAGTTTCAACAGTTCACTAGCCGATTTGAACTTCTCAAACCGTAAGACTTTGCATGGTATTTGATCATAATTTGTAAACTTACCGC 102 16140333 0.803005578 37 95 662 0.967105263 2.167317335 0.118421053 0.343137255 0.559210526 102 5 0 147 3L:16140298-16140532 6 34.5 2189 FBgn0036576 611.6966667 13.02666667 19.93 0.056400504 2.648413511 1.731058705 -7 -7 -7 0.1 dme-miR-283-5p 8mer-A1 TGATATTA 3L 1617380 1617387 - 3L_1617380_1617387_- 0.592052969 0.590709209 0.591381089 0.00095021 CG13926 FBtr0072823 1617346 1617423 3L - 1617367 1617414 3'utr CG13926 FlyBase G33398.1 AATGGAGGCGTCGCCTCCACAAGTTGTTGATATTACAAGTAAAGTTTT 15 1617391 0.824440077 2 15 123 1 1.204119983 0.0625 0.066666667 0.125 15 0 0 16 3L:1617367-1617414 8 CG13926 FBtr0072823 1617346 1617423 TGATATTA 8mer-A1 dme-miR-283-5p 3L - 1617370 1617414 3'utr CG13926 FlyBase G25263.1 AATGGAGGCGTCGCCTCCACAAGTTGTTGATATTACAAGTAAAGT 8 1617391 0.897763154 2 8 58 1 1.079181246 0.083333333 0.5 0.666666667 8 0 0 12 3L:1617370-1617414 8 11 2190 FBgn0035243 84.33333333 14.92666667 22.79 0.130434783 0.736936132 0.482667837 4 4 4 0.1 dme-bantam-3p 8mer-A1 TGATCTCA 3L 16230842 16230849 + 3L_16230842_16230849_+ 0.631136309 0.631136351 0.63113633 7.07E-08 CG5027 FBtr0075457 16230770 16231139 3L + 16230792 16230866 3'utr CG5027 FlyBase G30835.1 TCTAGTGAAAGCTTTTGATTGCGAGTGAATGTTAGAGAAAGTAAATAAGATGATCTCATAGTGCATTTCCGAGCA 67 16230842 0.975587111 7 66 419 0.9875 1.897627091 0.5125 0.149253731 0.2875 67 1 0 79 3L:16230792-16230866 8 CG5027 FBtr0075457 16230770 16231139 TGATCTCA 8mer-A1 dme-bantam-3p 3L + 16230820 16230862 3'utr CG5027 FlyBase G23326.1 ATGTTAGAGAAAGTAAATAAGATGATCTCATAGTGCATTTCCG 58 16230842 0.796350367 5 53 362 0.905882353 1.886490725 0.564705882 0.362068966 0.564705882 58 8 0 77 3L:16230820-16230862 8 61 2191 FBgn0036579 214.6666667 14.06 21.50666667 0.284161491 4.338549075 2.83632982 0 0 0 0.1 dme-miR-31a-5p 8mer-A1 TCTTGCCA 3L 16236638 16236645 + 3L_16236638_16236645_+ 0.631136334 0.631136385 0.631136359 7.07E-08 l(3)72Dp FBtr0075459 16236240 16236999 3L + 16236625 16236662 3'utr l(3)72Dp FlyBase G30844.1 AAGCGTTAAATATTCTTGCCAAATCAAGAGACTAATAT 8 16236637 0.703653725 3 8 57 1 0.954242509 0 0.125 0.222222222 8 0 0 9 3L:16236625-16236662 8 l(3)72Dp FBtr0075459 16236240 16236999 TCTTGCCA 8mer-A1 dme-miR-31a-5p 3L + 16236606 16236661 3'utr l(3)72Dp FlyBase G23333.1 AAAACAAAATTCTATCTTTAAGCGTTAAATATTCTTGCCAAATCAAGAGACTAATA 11 16236639 0.98601774 4 9 70 0.866666667 0.812913357 0.066666667 0.272727273 0.466666667 11 1 1 13 3L:16236606-16236661 8 9 2192 FBgn0263607 58 2.816666667 4.343333333 0.155172414 3.195266272 2.072141213 1 -1 0 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG 3L 16372779 16372784 - 3L_16372779_16372784_- 0.999999676 0.999999908 0.999999792 1.41E-07 roq FBtr0075423|FBtr0333265 16372435|16370936 16374520|16374520 3L - 16372766 16372808 3'utr roq FlyBase G37250.1 TTGGCGATATCCGCTCAGACTTTGGCTGTGGTGATGATGATTT 46 16372786 0.740223918 8 46 398 1 1.681241237 0.291666667 0.043478261 0.083333333 46 0 0 48 3L:16372766-16372808 6 roq FBtr0075423|FBtr0333265 16372435|16370936 16374520|16374520 GCTGTG 6mer2-7 dme-miR-1008-3p 3L - 16372772 16372807 3'utr roq FlyBase G28130.1 TGGCGATATCCGCTCAGACTTTGGCTGTGGTGATGA 30 16372786 0.718721147 5 30 244 1 1.698970004 0.18 0.366666667 0.62 30 0 0 50 3L:16372772-16372807 6 37.5 2193 FBgn0036621 1477.286667 40.04333333 61.43666667 0.025384376 0.936485474 0.610384678 2 2 2 0.1 dme-miR-1003-3p 7mer-A1 TGTGAGA 3L 16373475 16373481 - 3L_16373475_16373481_- 0.598381578 0.598378325 0.598379951 2.33E-06 roq FBtr0075423|FBtr0333265|FBtr0331173 16372435|16370936|16373214 16374520|16374520|16374520 3L - 16373444 16373522 3'utr roq FlyBase G37252.1 AATAAATTAAAATCACGTCCCATTTTCCCCTTTTTGTAAACTGTGAGAAGAGTGAAGTACAGGAGAATTGACAAACAGG 10 16373488 0.982669797 7 9 63 0.9 0.954242509 0.2 0 0 10 1 0 9 3L:16373444-16373522 7 roq FBtr0331173|FBtr0075423|FBtr0333265 16373214|16372435|16370936 16374520|16374520|16374520 TGTGAGA 7mer-A1 dme-miR-1003-3p 3L - 16373466 16373519 3'utr roq FlyBase G28133.1 AAATTAAAATCACGTCCCATTTTCCCCTTTTTGTAAACTGTGAGAAGAGTGAAG 5 16373510 0.984506562 4 5 41 1 0.903089987 0 0.4 0.625 5 0 0 8 3L:16373466-16373519 7 3 2194 FBgn0036621 1477.286667 40.04333333 61.43666667 0.00203075 0.074918838 0.048830774 7 29 18 0.1 dme-miR-304-5p 6mer3-8 TGAGAT 3L 16373956 16373961 - 3L_16373956_16373961_- 0.999961568 0.999967723 0.999964646 4.31E-06 roq FBtr0075423|FBtr0333265|FBtr0331173 16372435|16370936|16373214 16374520|16374520|16374520 3L - 16373922 16373986 3'utr roq FlyBase G37254.1 CAGCGAAGATTTTAAAGCAATTTTCTGAGATGAAATAGAGATACTGTGCACTAATTAACTGAATC 30 16373965 0.986502343 6 30 252 1 1.531478917 0 0.1 0.205882353 30 0 0 34 3L:16373922-16373986 6 roq FBtr0331173|FBtr0075423|FBtr0333265 16373214|16372435|16370936 16374520|16374520|16374520 TGAGAT 6mer3-8 dme-miR-304-5p 3L - 16373937 16373990 3'utr roq FlyBase G28135.2 ATAGCAGCGAAGATTTTAAAGCAATTTTCTGAGATGAAATAGAGATACTGTGCA 18 16373964 0.974481787 4 16 125 0.826086957 1.278753601 0.130434783 0.166666667 0.347826087 18 4 0 19 3L:16373937-16373990 6 22.5 2195 FBgn0036621 1477.286667 40.04333333 61.43666667 0.015230626 0.561891284 0.366230807 4 3 3.5 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 3L 1638011 1638017 - 3L_1638011_1638017_- 0.620204266 0.620204266 0.620204266 0 metl FBtr0072814|FBtr0072813 1637940|1637940 1638040|1638040 3L - 1637994 1638037 3'utr metl FlyBase G33402.1 AATTTAGACGAATAGTTCTGTGCATTTTAAACCTTGTTCAAATC 5 1638018 0.985561738 5 5 43 1 0.954242509 0 0.6 0.777777778 5 0 0 9 3L:1637994-1638037 7 metl FBtr0072814|FBtr0072813 1637940|1637940 1638040|1638040 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 1637993 1638037 3'utr metl FlyBase G25265.1 AATTTAGACGAATAGTTCTGTGCATTTTAAACCTTGTTCAAATCA 6 1638012 0.992272545 5 5 52 0.7 0.84509804 0 0.5 0.7 6 3 0 7 3L:1637993-1638037 7 5.5 2196 FBgn0035247 536.0166667 56.80666667 87.84333333 0.010260875 0.096819622 0.062611467 1 -5 -2 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA 3L 16404084 16404089 - 3L_16404084_16404089_- 0.747114894 0.999999975 0.873557435 0.178816769 fax FBtr0075413|FBtr0100478|FBtr0331175|FBtr0100477|FBtr0075412|FBtr0331176 16402794|16402794|16402794|16403576|16402794|16402794 16405116|16405116|16405116|16405116|16405116|16405116 3L - 16404082 16404130 3'utr fax FlyBase G37273.1 TTTATATATATATGATTGCAAATAGTAATTTTGATTCTCGTGTGCAAAT 14 16404100 0.979321819 5 13 141 1 1.230448921 0.058823529 0.142857143 0.294117647 14 0 0 17 3L:16404082-16404130 6 fax FBtr0075412|FBtr0331176|FBtr0331175|FBtr0100477|FBtr0075413|FBtr0100478 16402794|16402794|16402794|16403576|16402794|16402794 16405116|16405116|16405116|16405116|16405116|16405116 GTGCAA 6mer3-8 dme-miR-92b-3p 3L - 16404071 16404119 3'utr fax FlyBase G28150.1 ATGATTGCAAATAGTAATTTTGATTCTCGTGTGCAAATAATTAAACAAA 16 16404099 0.590378522 7 16 156 1 1.414973348 0.153846154 0.5 0.692307692 16 0 0 26 3L:16404071-16404119 6 13 2197 FBgn0014163 1457.54 56.77666667 88.11333333 0.008919138 0.228967299 0.147537263 11 10 10.5 0.1 dme-miR-995-5p 6mer3-8 AATTCG 3L 1640722 1640727 + 3L_1640722_1640727_+ 0.991006434 0.983134 0.987070217 0.005566627 Bgb FBtr0072758 1640635 1640952 3L + 1640689 1640820 stop_codon Bgb FlyBase G27184.1 AGCAGCAGACGCATCACCAGCAGTTAGAGACTCAATTCGCGAATACTCAATATTTCATGGACAACTGAGAATGCTCCGAACCCCTTAAGAGGGCTTTCACTTGAGAGATTTCAATACGATTACGTTAGACAC 126 1640713 0.773529019 18 120 617 0.959459459 1.67516709 0.054054054 0.142857143 0.27027027 126 4 2 142 3L:1640689-1640820 6 Bgb FBtr0072758 1640635 1640952 AATTCG 6mer3-8 dme-miR-995-5p 3L + 1640689 1640931 stop_codon Bgb FlyBase G20582.1 AGCAGCAGACGCATCACCAGCAGTTAGAGACTCAATTCGCGAATACTCAATATTTCATGGACAACTGAGAATGCTCCGAACCCCTTAAGAGGGCTTTCACTTGAGAGATTTCAATACGATTACGTTAGACACGCTCGAATAATTATGCTCCTAGATTAGTGTTAGATGTAATGCTTACTTTACGTATGCTTTTATGGTATTATACTTACAACTTAGTGTGAAATTAGTGTCGTATCTTTAACT 100 1640713 0.919911696 27 96 560 0.965986395 1.550228353 0.095238095 0.3 0.523809524 100 2 3 142 3L:1640689-1640931 6 78 2198 FBgn0013753 472.3333333 47.15333333 72.62666667 0.165137615 1.654177859 1.07398568 9 9 9 0.1 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 16470650 16470657 - 3L_16470650_16470657_- 0.668734167 0.668734145 0.668734156 7.07E-08 aos FBtr0075408 16470384 16471298 3L - 16470594 16470686 3'utr aos FlyBase G37291.1 CGAAGGCAGTTTGAAACTGTGGCAACTCTGGCAGCTATTTTAGTGCAATTTTTGTGACGCCTTCACAGCCACTTCTCCGGAATTTGAGCAAGT 1274 16470658 0.868090257 17 1256 9187 0.984866828 2.910357557 0.401331719 0.226059655 0.4031477 1274 24 1 1627 3L:16470594-16470686 8 aos FBtr0075408 16470384 16471298 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L - 16470587 16470688 3'utr aos FlyBase G28164.1 AGCGAAGGCAGTTTGAAACTGTGGCAACTCTGGCAGCTATTTTAGTGCAATTTTTGTGACGCCTTCACAGCCACTTCTCCGGAATTTGAGCAAGTAAATTAG 1016 16470658 0.981606195 18 1003 7362 0.987228608 2.411058239 0.344827586 0.382874016 0.599616858 1016 15 5 1546 3L:16470587-16470688 8 1133 2199 FBgn0004569 11.33333333 0.5 0.773333333 99.97058824 2266 1465.086207 1 1 1 0.1 dme-miR-14-3p 6mer3-8 AAGACT 3L 16491942 16491947 - 3L_16491942_16491947_- 0.999999999 0.999997343 0.999998671 1.91E-06 CG43373 FBtr0307367 16491836 16507727 3L - 16491873 16491961 3'utr CG43373 FlyBase G37301.1 CGATTCCTAATAAAAAGACTTGAACCCAGAGCAGATATTGAATGCATTGCATTGAATATTTTGCCAATGTAAATCATTCCCATCAACAC 12 16491953 0.959026325 8 12 63 1 1.230448921 0.294117647 0.25 0.470588235 12 0 0 17 3L:16491873-16491961 6 CG43373 FBtr0307367 16491836 16507727 AAGACT 6mer3-8 dme-miR-14-3p 3L - 16491929 16491997 3'utr CG43373 FlyBase G28170.1 GAGGAGCACAAGAACTAGCCTGTGCAATAACTTTAACGATTCCTAATAAAAAGACTTGAACCCAGAGCA 9 16491952 0.97609129 5 6 35 0.777777778 0.84509804 0.444444444 0 0 9 2 0 7 3L:16491929-16491997 6 6.5 2200 FBgn0263131 3.073333333 0.063333333 0.1 2.114967462 102.6315789 65 6 5 5.5 0.1 dme-miR-282-5p 6mer2-7 GAGGCT 3L 16575964 16575969 + 3L_16575964_16575969_+ 0.9999993 1 0.99999965 4.95E-07 mbf1 FBtr0075393|FBtr0305570|FBtr0305569|FBtr0075394 16575868|16575868|16575868|16575868 16576408|16576871|16576408|16576871 3L + 16575941 16575994 3'utr mbf1 FlyBase G30873.1 GAACCATCAACACACGGATTCTGGAGGCTGGAGCACTGTAAGCGGCAGACGCAA 8 16575961 0.93051506 3 7 28 1 1 0.7 0.125 0.3 8 0 0 10 3L:16575941-16575994 6 mbf1 FBtr0305570|FBtr0305569|FBtr0075394|FBtr0075393 16575868|16575868|16575868|16575868 16576871|16576408|16576871|16576408 GAGGCT 6mer2-7 dme-miR-282-5p 3L + 16575953 16575991 3'utr mbf1 FlyBase G23350.1 CACGGATTCTGGAGGCTGGAGCACTGTAAGCGGCAGACG 5 16575962 0.961839735 2 4 20 0.75 0.77815125 0.75 0.6 0.75 5 2 0 6 3L:16575953-16575991 6 5.5 2201 FBgn0262732 2231.09 243.8166667 374.3166667 0.002465163 0.022557933 0.014693441 3 2 2.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3L 16576661 16576667 + 3L_16576661_16576667_+ 0.661615472 0.661615422 0.661615447 7.07E-08 mbf1 FBtr0305570|FBtr0075394 16575868|16575868 16576871|16576871 3L + 16576574 16576687 3'utr mbf1 FlyBase G30878.1 TATCGTGTAAGGCTCTTGAACTGTGCGTTTACTAATGCATTATACATATTATACAAAAACATATGCTAAATGTATTTAGAAACATTTTCTAGTCTACAAAATATTTAAATAATT 91 16576660 0.94012809 11 87 657 0.974137931 1.752048448 0.00862069 0.241758242 0.405172414 91 2 1 113 3L:16576574-16576687 7 mbf1 FBtr0305570|FBtr0075394 16575868|16575868 16576871|16576871 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 16576635 16576682 3'utr mbf1 FlyBase G23354.1 TATGCTAAATGTATTTAGAAACATTTTCTAGTCTACAAAATATTTAAA 61 16576660 0.923070235 6 61 428 1 1.886490725 0.012987013 0.196721311 0.363636364 61 0 0 77 3L:16576635-16576682 7 69 2202 FBgn0262732 2231.09 243.8166667 374.3166667 0.030926587 0.282999521 0.184335901 1 1 1 0.1 dme-bantam-3p 6mer3-8 TGATCT 3L 16589804 16589809 + 3L_16589804_16589809_+ 0.999999999 0.999999999 0.999999999 0 l(3)73Ah FBtr0075311|FBtr0307336 16589773|16589773 16590132|16590132 3L + 16589728 16589892 stop_codon l(3)73Ah FlyBase G30898.1 GGGATCCGCCGCTTCGGCTGCAGTTTCGTCCGCGGGTCGAGCTCTAACCACTGTTTTAGTATAATGCCACAACAAATGATCTATTTTTATAATTTATTGACAATGCGTAAATATCGTAATTAGGAGAGTCGCTAGTGTTAGTCCCCTCGAAACCATGAGTGTATG 151 16589804 0.98487165 21 149 1203 0.983695652 1.655618584 0.048913043 0.165562914 0.315217391 151 0 3 181 3L:16589728-16589892 6 l(3)73Ah FBtr0307336|FBtr0075311 16589773|16589773 16590132|16590132 TGATCT 6mer3-8 dme-bantam-3p 3L + 16589729 16589847 stop_codon l(3)73Ah FlyBase G23376.1 GGATCCGCCGCTTCGGCTGCAGTTTCGTCCGCGGGTCGAGCTCTAACCACTGTTTTAGTATAATGCCACAACAAATGATCTATTTTTATAATTTATTGACAATGCGTAAATATCGTAAT 98 16589804 0.91403582 13 93 817 0.922535211 2.117271296 0.014084507 0.346938776 0.549295775 98 11 0 131 3L:16589729-16589847 6 106.5 2203 FBgn0002283 168.7966667 15.21333333 23.25333333 0.63093663 7.000438212 4.579988532 0 0 0 0.1 dme-miR-317-5p 6mer2-7 TATCCC 3L 16589929 16589934 + 3L_16589929_16589934_+ 0.999999994 0.995747364 0.997873679 0.003007042 l(3)73Ah FBtr0075311|FBtr0307336 16589773|16589773 16590132|16590132 3L + 16589922 16589967 3'utr l(3)73Ah FlyBase G30899.1 ATATGGTTATCCCTCCTAGAATTAAGTAACTTCCACTTCCTAACTC 16 16589938 0.983181755 5 15 119 1 1.255272505 0 0.125 0.222222222 16 0 0 18 3L:16589922-16589967 6 l(3)73Ah FBtr0307336|FBtr0075311 16589773|16589773 16590132|16590132 TATCCC 6mer2-7 dme-miR-317-5p 3L + 16589898 16589952 3'utr l(3)73Ah FlyBase G23377.1 ATGTGCATGTATAAAGTCGTAAATATATGGTTATCCCTCCTAGAATTAAGTAACT 6 16589938 0.987517253 3 6 54 1 0.903089987 0 0.333333333 0.5 6 0 0 8 3L:16589898-16589952 6 9.5 2204 FBgn0002283 168.7966667 15.21333333 23.25333333 0.056280732 0.624452235 0.408543578 -9 -9 -9 0.1 dme-miR-184-5p 6mer3-8 TGATAA 3L 16613454 16613459 - 3L_16613454_16613459_- 0.999997288 1 0.999998644 1.91E-06 Mo25 FBtr0075358 16613216 16614149 3L - 16613404 16613498 3'utr Mo25 FlyBase G37362.1 GAAAACTAAATACTGCATAAAAATAATAATAATTCATAGTGATAATTGTCTGTGCATCCTTCGGCATGGACTCTACTATATATACACTGATATAT 16 16613453 0.993852154 10 12 137 0.75 0.77815125 0.125 0 0 16 3 1 12 3L:16613404-16613498 6 Mo25 FBtr0075358 16613216 16614149 TGATAA 6mer3-8 dme-miR-184-5p 3L - 16613440 16613471 3'utr Mo25 FlyBase G28215.1 AATAATTCATAGTGATAATTGTCTGTGCATCC 6 16613466 0.885110658 5 6 47 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3L:16613440-16613471 6 7 2205 FBgn0017572 1422.476667 76.83666667 118.16 0.004920995 0.091102338 0.059241706 -6 7 0.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 3L 16616544 16616549 - 3L_16616544_16616549_- 0.977292707 0.999713515 0.988503111 0.0158539 Abl FBtr0345369|FBtr0112790 16615864|16615864 16622773|16622773 3L - 16616516 16616563 3'utr Abl FlyBase G37369.2 TATGTCTATGATCATGATCTATATGTGCTCGGCGTAACCATTGCATAC 14 16616549 0.788815173 5 13 111 0.944444444 1.230448921 0.166666667 0.214285714 0.388888889 14 1 0 17 3L:16616516-16616563 6 Abl FBtr0345369|FBtr0112790 16615864|16615864 16622773|16622773 TGATCT 6mer3-8 dme-bantam-3p 3L - 16616514 16616565 3'utr Abl FlyBase G28219.1 TATATGTCTATGATCATGATCTATATGTGCTCGGCGTAACCATTGCATACAC 11 16616549 0.985251883 4 11 90 1 1.204119983 0 0.363636364 0.5625 11 0 0 16 3L:16616514-16616565 6 11 2206 FBgn0000017 169917.41 1653.646667 2554.62 6.47E-05 0.006651965 0.004305924 0 0 0 0.1 dme-miR-190-5p 6mer3-8 ACATAT 3L 16622071 16622076 - 3L_16622071_16622076_- 0.739173639 0.916753818 0.827963728 0.125568164 Abl FBtr0345369|FBtr0112790 16615864|16615864 16622773|16622773 3L - 16621995 16622207 3'utr Abl FlyBase G37371.1 CAAACGTATTCGCGCTTCGTTTGTTTTATATACATAGAAAGACACAAGACATGGCTTAAGAATGAAAGGAAATATATTCATAGAATATCTCAATAAACTTAGTAATTACGAAGAAAACGCAATGCATATATACATATACATACATATATTTACATATACTAGTCGTAAAATGTTTTATTAAACCTATACATTTACATACTTCTACAAGATAAA 91 16622080 0.982891016 27 80 597 0.87962963 1.67669361 0.138888889 0.164835165 0.296296296 91 12 1 95 3L:16621995-16622207 6 Abl FBtr0345369|FBtr0112790 16615864|16615864 16622773|16622773 ACATAT 6mer3-8 dme-miR-190-5p 3L - 16622030 16622149 3'utr Abl FlyBase G28221.1 AGAATGAAAGGAAATATATTCATAGAATATCTCAATAAACTTAGTAATTACGAAGAAAACGCAATGCATATATACATATACATACATATATTTACATATACTAGTCGTAAAATGTTTTAT 67 16622080 0.978272903 20 56 452 0.85 1.929418926 0.16 0.343283582 0.56 67 15 0 85 3L:16622030-16622149 6 18.5 2207 FBgn0000017 169917.41 1653.646667 2554.62 0.000108876 0.011187396 0.007241782 4 4 4 0.1 dme-miR-252-5p 6mer3-8 GTACTT 3L 16649304 16649309 - 3L_16649304_16649309_- 1 0.999999989 0.999999995 0 Baldspot FBtr0075355|FBtr0075356 16648440|16648839 16650074|16650074 3L - 16649294 16649329 3'utr Baldspot FlyBase G37413.1 AGTTGGGGTCTGAGAACTTTGTACTTCTAAGTCTAT 10 16649309 0.670045333 4 10 86 1 1.079181246 0.166666667 0.2 0.333333333 10 0 0 12 3L:16649294-16649329 6 Baldspot FBtr0075356|FBtr0075355 16648839|16648440 16650074|16650074 GTACTT 6mer3-8 dme-miR-252-5p 3L - 16649292 16649329 3'utr Baldspot FlyBase G28254.1 AGTTGGGGTCTGAGAACTTTGTACTTCTAAGTCTATAC 6 16649309 0.984309826 5 6 46 1 0.954242509 0.333333333 0.5 0.666666667 6 0 0 9 3L:16649292-16649329 6 7 2208 FBgn0260960 2360.606667 103.09 158.2033333 0.002965339 0.067901833 0.044246855 0 0 0 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 16649828 16649833 - 3L_16649828_16649833_- 0.999999999 0.994786803 0.997393401 0.003686289 Baldspot FBtr0075355|FBtr0075356 16648440|16648839 16650074|16650074 3L - 16649815 16649965 3'utr Baldspot FlyBase G37417.1 CCTGGGTGGCACACGACCGGTCGGATGAGAGTTTAATTTTGTAAGCCAAAAGTTGTACCGTGTGGACAGGCGTACGAACCATATATCTGAACATGTATATAAAAGAAGAAAAAAACAGACGAACCTAAGCTAACCAAAACTCAGAGTCGAG 12 16649837 0.923792939 9 12 51 1 1.079181246 0.25 0 0 12 0 0 12 3L:16649815-16649965 6 Baldspot FBtr0075356|FBtr0075355 16648839|16648440 16650074|16650074 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 16649769 16649849 3'utr Baldspot FlyBase G28256.1 AGACGAACCTAAGCTAACCAAAACTCAGAGTCGAGTCAGAATAAACTCTATGTAATTGAGGGGCAAAGAAGCGAGCGCATG 7 16649837 0.926931711 6 6 25 0.75 0.77815125 0 0.142857143 0.25 7 2 0 6 3L:16649769-16649849 6 3.5 2209 FBgn0260960 2360.606667 103.09 158.2033333 0.00148267 0.033950917 0.022123428 4 4 4 0.1 dme-bantam-3p 6mer3-8 TGATCT 3L 16662769 16662774 - 3L_16662769_16662774_- 0.881061205 0.931512416 0.90628681 0.035674386 Galphaf FBtr0075354 16662555 16662848 3L - 16662758 16662796 3'utr Galphaf FlyBase G37424.1 GTCCTCAGGCCCCCACCAACTGTGATCTAGTAGGATATG 17 16662769 0.938051367 3 17 68 1 1.342422681 0.318181818 0.294117647 0.454545455 17 0 0 22 3L:16662758-16662796 6 Galphaf FBtr0075354 16662555 16662848 TGATCT 6mer3-8 dme-bantam-3p 3L - 16662763 16662790 3'utr Galphaf FlyBase G28261.1 AGGCCCCCACCAACTGTGATCTAGTAGG 6 16662769 0.92378564 3 6 21 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 3L:16662763-16662790 6 11.5 2210 FBgn0010223 69.33333333 4.69 7.25 0.165865385 2.452025586 1.586206897 -5 -5 -5 0.1 dme-miR-252-5p 6mer3-8 GTACTT 3L 16672363 16672368 - 3L_16672363_16672368_- 1 0.999992748 0.999996374 5.16E-06 zetaCOP FBtr0075353 16671937 16672420 3L - 16672353 16672454 lincRNA_exon-lincRNA_intron zetaCOP FlyBase G37429.1 GGTAACTAACACCCTTAATGGTCTATTTTGGTAGTCTAACTACTTGGTAGCTCTTCTAAGTGTTTATAACTCAATGGTAGCCGTTTGTACTTTAATTTTGTC 28 16672380 0.988376901 11 26 263 0.935483871 1.462397998 0.096774194 0.107142857 0.193548387 28 2 0 29 3L:16672353-16672454 6 zetaCOP FBtr0075353 16671937 16672420 GTACTT 6mer3-8 dme-miR-252-5p 3L - 16672342 16672397 3'utr zetaCOP FlyBase G28266.1 AAGTGTTTATAACTCAATGGTAGCCGTTTGTACTTTAATTTTGTCTGGTTTCGTTT 10 16672380 0.986322987 4 10 92 1 1.041392685 0 0.1 0.181818182 10 0 0 11 3L:16672342-16672397 6 13 2211 FBgn0040512 644 115.9 176.2033333 0.020186335 0.11216566 0.0737784 12 12 12 0.1 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3L 16723835 16723842 + 3L_16723835_16723842_+ 0.631134508 0.631136641 0.631135575 1.48E-06 Dab FBtr0305085|FBtr0305084|FBtr0333625|FBtr0330190|FBtr0305086|FBtr0333626|FBtr0330189|FBtr0075318 16723340|16723340|16723340|16723748|16723340|16723340|16723748|16723340 16724415|16724415|16724415|16724415|16724415|16724415|16724415|16724575 3L + 16723821 16723847 3'utr Dab FlyBase G30935.1 ATTCGCCACATATATCTAGTCAACTCA 13 16723833 0.711802589 3 13 81 1 1.255272505 0 0.307692308 0.5 13 0 0 18 3L:16723821-16723847 8 Dab FBtr0330189|FBtr0075318|FBtr0305086|FBtr0333626|FBtr0333625|FBtr0330190|FBtr0305085|FBtr0305084 16723748|16723340|16723340|16723340|16723340|16723748|16723340|16723340 16724415|16724575|16724415|16724415|16724415|16724415|16724415|16724415 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L + 16723811 16723850 3'utr Dab FlyBase G23405.1 ACGATATTTAATTCGCCACATATATCTAGTCAACTCAATC 6 16723834 0.97049004 4 6 41 1 1 0 0.5 0.7 6 0 0 10 3L:16723811-16723850 8 9.5 2212 FBgn0000414 579.9766667 8.573333333 13.19 0.016379969 1.108087092 0.720242608 2 1 1.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 16777524 16777529 - 3L_16777524_16777529_- 0.975782979 0.998824767 0.987303873 0.016293013 CG13025 FBtr0333610|FBtr0333610|FBtr0333610|FBtr0075346|FBtr0075346|FBtr0075346 16777447|16777447|16777447|16776529|16776529|16776529 16777593|16777593|16777593|16777593|16777593|16777593 3L - 16777487 16777539 3'utr CG13025 FlyBase G37456.1 TAGCTAATTTCTGTGAAATATGTGACTACTGATATAAACGAGCTTTTAAGCTA 14 16777531 0.721034062 7 10 108 0.777777778 1.146128036 0.222222222 0.214285714 0.388888889 14 4 0 14 3L:16777487-16777539 6 CG13025 FBtr0075346|FBtr0075346|FBtr0075346|FBtr0333610|FBtr0333610|FBtr0333610 16776529|16776529|16776529|16777447|16777447|16777447 16777593|16777593|16777593|16777593|16777593|16777593 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 16777483 16777543 3'utr CG13025 FlyBase G28288.1 CTTTTAGCTAATTTCTGTGAAATATGTGACTACTGATATAAACGAGCTTTTAAGCTAAGTT 22 16777531 0.684653915 8 21 183 0.962962963 1.113943352 0.222222222 0.227272727 0.37037037 22 0 1 26 3L:16777483-16777543 6 14 2213 FBgn0036660 194.1566667 10.47 16.01333333 0.072106718 1.337153773 0.87427144 2 2 2 0.1 dme-miR-263a-5p 6mer2-7 TGCCAT 3L 16782073 16782078 + 3L_16782073_16782078_+ 0.999977157 0.999998757 0.999987957 1.53E-05 CG9705 FBtr0333607|FBtr0075325|FBtr0075324 16781837|16781837|16781837 16782419|16782419|16782419 3L + 16782030 16782191 3'utr CG9705 FlyBase G30940.1 AGCCGAAACCAGACCAGAACGTAATAGAATGGAACAACAGGCCTGCCATCCAGCCAGCCAGCGAGCAGCATCACAAGAGTTTCAATTGAACACTTAATTAGAATTTAAGCTAAGCTATGGAAGTCAAACAAAACGCAGTCACAAATATTGCCTTTCCCTCTG 43 16782073 0.942980018 12 41 168 0.960784314 1.69019608 0.254901961 0.186046512 0.31372549 43 2 0 49 3L:16782030-16782191 6 CG9705 FBtr0075325|FBtr0075324|FBtr0333607 16781837|16781837|16781837 16782419|16782419|16782419 TGCCAT 6mer2-7 dme-miR-263a-5p 3L + 16782040 16782098 3'utr CG9705 FlyBase G23411.1 AGACCAGAACGTAATAGAATGGAACAACAGGCCTGCCATCCAGCCAGCCAGCGAGCAGC 18 16782073 0.825946531 3 18 22 1 1.591064607 0.384615385 0.611111111 0.820512821 18 0 0 39 3L:16782040-16782098 6 20.5 2214 FBgn0036661 2532.823333 208.9866667 321.3 0.008093735 0.098092382 0.063803299 0 0 0 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 16782352 16782358 + 3L_16782352_16782358_+ 0.661607764 0.661609188 0.661608476 9.90E-07 CG9705 FBtr0333607|FBtr0075325|FBtr0075324 16781837|16781837|16781837 16782419|16782419|16782419 3L + 16782329 16782433 3'utr CG9705 FlyBase G30941.2 TTAATTATAACAAAACATCTGAATGTGTTCGCGAAGCAAACAAGCAAAATGCTCTCAGTAATTCACTTTATTATTAAAACAGCTGCAAAACAATTCCATCGGTGA 47 16782352 0.97443808 7 42 255 0.942307692 1.69019608 0.288461538 0.106382979 0.192307692 47 3 0 49 3L:16782329-16782433 7 CG9705 FBtr0075325|FBtr0075324|FBtr0333607 16781837|16781837|16781837 16782419|16782419|16782419 TGTGTTC 7mer-m8 dme-miR-317-3p 3L + 16782331 16782366 3'utr CG9705 FlyBase G23413.1 AATTATAACAAAACATCTGAATGTGTTCGCGAAGCA 21 16782352 0.741387901 3 17 107 0.862068966 0.920818754 0.172413793 0.333333333 0.517241379 21 2 2 25 3L:16782331-16782366 7 29 2215 FBgn0036661 2532.823333 208.9866667 321.3 0.011449673 0.138764833 0.090258326 0 0 0 0.1 dme-miR-277-3p 6mer3-8 TGCATT 3L 16785143 16785148 + 3L_16785143_16785148_+ 1 1 1 0 CG9706 FBtr0075326|FBtr0075327 16785050|16785050 16785246|16785246 3L + 16785114 16785192 3'utr CG9706 FlyBase G30945.1 AACAACTAATTCTAGGATTAGCAGACGTTTGCATTCTGTAGGCTAGCGAAATTACAAATTCCCGCCTTGGTATTGTTTT 23 16785150 0.957349062 8 23 165 1 1.477121255 0.033333333 0.304347826 0.466666667 23 0 0 30 3L:16785114-16785192 6 CG9706 FBtr0075326|FBtr0075327 16785050|16785050 16785246|16785246 TGCATT 6mer3-8 dme-miR-277-3p 3L + 16785121 16785164 3'utr CG9706 FlyBase G23415.1 AATTCTAGGATTAGCAGACGTTTGCATTCTGTAGGCTAGCGAAA 9 16785142 0.974375068 3 9 61 1 1.204119983 0.375 0.555555556 0.75 9 0 0 16 3L:16785121-16785164 6 12.5 2216 FBgn0036662 379.6666667 23.33333333 36.06666667 0.032923617 0.535714286 0.346580407 -7 1 -3 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 16787755 16787760 - 3L_16787755_16787760_- 0.999440226 0.999632584 0.999536405 0.000136047 CG9674 FBtr0345074|FBtr0305916|FBtr0333608|FBtr0075344 16787571|16787571|16787571|16787571 16792436|16788409|16788409|16788409 3L - 16787738 16787788 3'utr CG9674 FlyBase G37476.1 GAACTGCATTCGACCGTTGACCGCAAATGTACCTAAGTGGCTATTGTTAAA 107 16787761 0.90662833 2 105 620 0.983870968 1.785329835 0.282258065 0.14953271 0.266129032 107 1 1 122 3L:16787738-16787788 6 CG9674 FBtr0075344|FBtr0305916|FBtr0333608|FBtr0345074 16787571|16787571|16787571|16787571 16788409|16788409|16788409|16792436 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L - 16787734 16787781 3'utr CG9674 FlyBase G28306.1 ATTCGACCGTTGACCGCAAATGTACCTAAGTGGCTATTGTTAAAACAA 43 16787761 0.894103356 2 42 230 0.986111111 1.851258349 0.291666667 0.441860465 0.666666667 43 1 0 71 3L:16787734-16787781 6 75 2217 FBgn0036663 1912.666667 32.48 50.08 0.039212269 2.3091133 1.497603834 1 1 1 0.1 dme-bantam-3p 7mer-m8 TGATCTC 3L 16787891 16787897 - 3L_16787891_16787897_- 0.658434986 0.661077241 0.659756113 0.001868318 CG9674 FBtr0345074|FBtr0305916|FBtr0333608|FBtr0075344 16787571|16787571|16787571|16787571 16792436|16788409|16788409|16788409 3L - 16787882 16787909 3'utr CG9674 FlyBase G37477.1 AAATTGATATGCTGATCTCCACCATCCT 15 16787898 0.690610132 4 12 90 0.909090909 1.301029996 0.454545455 0.2 0.454545455 15 2 0 20 3L:16787882-16787909 7 CG9674 FBtr0075344|FBtr0305916|FBtr0333608|FBtr0345074 16787571|16787571|16787571|16787571 16788409|16788409|16788409|16792436 TGATCTC 7mer-m8 dme-bantam-3p 3L - 16787882 16787911 3'utr CG9674 FlyBase G28307.1 GAAAATTGATATGCTGATCTCCACCATCCT 13 16787897 0.718071018 3 11 75 0.764705882 0.636822098 0.529411765 0.307692308 0.470588235 13 2 2 13 3L:16787882-16787911 7 14 2218 FBgn0036663 1912.666667 32.48 50.08 0.007319624 0.431034483 0.279552716 1 0 0.5 0.1 dme-miR-8-3p 6mer3-8 CAGTAT 3L 16789590 16789595 - 3L_16789590_16789595_- 1 1 1 0 CG9674 FBtr0345074|FBtr0333609|FBtr0305915 16787571|16788247|16788247 16792436|16792331|16792331 3L - 16789574 16789622 5'utr CG9674 FlyBase G37486.1 CGCAACGATCGCGTTGGTGGACTTTTGCAGTATGGTATTCCCACGATGA 11 16789606 0.851354766 6 11 78 1 1.230448921 0.294117647 0.454545455 0.647058824 11 0 0 17 3L:16789574-16789622 6 CG9674 FBtr0333609|FBtr0305915|FBtr0345074 16788247|16788247|16787571 16792331|16792331|16792436 CAGTAT 6mer3-8 dme-miR-8-3p 3L - 16789554 16789625 5'utr CG9674 FlyBase G28311.1 GAGCGCAACGATCGCGTTGGTGGACTTTTGCAGTATGGTATTCCCACGATGAAGCTTTCCAAGGAGGTGGTC 7 16789598 0.983758966 4 7 55 1 1.113943352 0.384615385 0.428571429 0.692307692 7 0 0 13 3L:16789554-16789625 6 5.5 2219 FBgn0036663 1912.666667 32.48 50.08 0.002875566 0.169334975 0.109824281 11 3 7 0.1 dme-miR-307a-3p 7mer-m8 GGTTGTG 3L 16791639 16791645 - 3L_16791639_16791645_- 0.461404234 0.702943099 0.582173667 0.170793794 CG9674 FBtr0345074|FBtr0333609|FBtr0305915 16787571|16788247|16788247 16792436|16792331|16792331 3L - 16791617 16791691 intron-5'utr CG9674 FlyBase G37491.1 GTGTGATTGTTCAGGCTGATGGACAGCTCCGCACAGGATTCGATGTGGTTGTGGCTGCACTGCTGGGTGCTGATG 12 16791642 0.972398425 9 12 76 1 1.146128036 0.214285714 0.166666667 0.285714286 12 0 0 14 3L:16791617-16791691 7 CG9674 FBtr0333609|FBtr0305915|FBtr0345074 16788247|16788247|16787571 16792331|16792331|16792436 GGTTGTG 7mer-m8 dme-miR-307a-3p 3L - 16791630 16791660 5'utr CG9674 FlyBase G28316.1 CACAGGATTCGATGTGGTTGTGGCTGCACTG 8 16791646 0.693964738 4 8 53 1 1.146128036 0.571428571 0.5 0.714285714 8 0 0 14 3L:16791630-16791660 7 7.5 2220 FBgn0036663 1912.666667 32.48 50.08 0.003921227 0.23091133 0.149760383 -3 1 -1 0.1 dme-miR-1003-3p 6mer2-7 TGTGAG 3L 16857476 16857481 + 3L_16857476_16857481_+ 0.999891241 0.99988151 0.999886375 6.86E-06 sina FBtr0075333|FBtr0075332|FBtr0344230 16857361|16857361|16857361 16858712|16858712|16858712 3L + 16857453 16857501 3'utr sina FlyBase G30993.2 AGGCGTCTAACTCGTGGACAGATTGTGAGTCTGGAGATTAAGAAGAAAG 24 16857477 0.676598129 7 22 117 1 1.462397998 0.551724138 0.166666667 0.310344828 24 0 0 29 3L:16857453-16857501 6 sina FBtr0075333|FBtr0075332|FBtr0344230 16857361|16857361|16857361 16858712|16858712|16858712 TGTGAG 6mer2-7 dme-miR-1003-3p 3L + 16857429 16857519 3'utr sina FlyBase G23452.1 AGTTTATAGCCCTCTGTTCGCATCAGGCGTCTAACTCGTGGACAGATTGTGAGTCTGGAGATTAAGAAGAAAGAGTTTTGCAGAGTTGTTT 23 16857477 0.969975085 8 23 135 1 1.544068044 0.485714286 0.347826087 0.571428571 23 0 0 35 3L:16857429-16857519 6 19 2221 FBgn0003410 433.1466667 16.57 25.46666667 0.04386505 1.146650573 0.746073298 -1 -1 -1 0.1 dme-miR-318-3p 6mer3-8 CCCAGT 3L 16968160 16968165 + 3L_16968160_16968165_+ 0.885502355 0.91456486 0.900033607 0.020550291 Nc73EF FBtr0075263|FBtr0075266 16967480|16967480 16968724|16968724 3L + 16968155 16968202 3'utr Nc73EF FlyBase G31043.1 TACTCCCCAGTAAATTGGACTGGAAGCTTTGATTACGATTCTCAACAA 8 16968169 0.967832417 4 8 44 1 1.041392685 0.363636364 0.25 0.454545455 8 0 0 11 3L:16968155-16968202 6 Nc73EF FBtr0075266|FBtr0075263 16967480|16967480 16968724|16968724 CCCAGT 6mer3-8 dme-miR-318-3p 3L + 16968157 16968183 3'utr Nc73EF FlyBase G23489.1 CTCCCCAGTAAATTGGACTGGAAGCTT 5 16968169 0.752529848 2 4 21 1 0.84509804 0 0.2 0.428571429 5 0 0 7 3L:16968157-16968183 6 5 2222 FBgn0010352 1272.733333 40.25666667 61.91 0.003928553 0.124203031 0.080762397 -9 -9 -9 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 16994230 16994236 + 3L_16994230_16994236_+ 0.424895186 0.638390557 0.531642871 0.150964045 Exn FBtr0302649|FBtr0302649|FBtr0302649|FBtr0302651|FBtr0302651|FBtr0302651|FBtr0302650|FBtr0302650|FBtr0302650|FBtr0302647|FBtr0302647|FBtr0302647|FBtr0302648|FBtr0302648|FBtr0302648 16994140|16994140|16994140|16994140|16994140|16994140|16994140|16994140|16994140|16994140|16994140|16994140|16994140|16994140|16994140 16994388|16994388|16994388|16994388|16994388|16994388|16994388|16994388|16994388|16994388|16994388|16994388|16994388|16994388|16994388 3L + 16994190 16994248 3'utr Exn FlyBase G31049.1 ACTCCATAGTCCGCAACCAATAGCCGTACACTTTAGGAAATGTGATAATTATTTAAATC 25 16994238 0.986633424 8 21 183 0.84375 1.431363764 0 0.2 0.375 25 5 0 27 3L:16994190-16994248 7 Exn FBtr0302648|FBtr0302648|FBtr0302648|FBtr0302650|FBtr0302650|FBtr0302650|FBtr0302647|FBtr0302647|FBtr0302647|FBtr0302649|FBtr0302649|FBtr0302649|FBtr0302651|FBtr0302651|FBtr0302651 16994140|16994140|16994140|16994140|16994140|16994140|16994140|16994140|16994140|16994140|16994140|16994140|16994140|16994140|16994140 16994388|16994388|16994388|16994388|16994388|16994388|16994388|16994388|16994388|16994388|16994388|16994388|16994388|16994388|16994388 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 16994208 16994242 3'utr Exn FlyBase G23492.1 AATAGCCGTACACTTTAGGAAATGTGATAATTATT 11 16994222 0.698132704 4 9 83 0.8 1.079181246 0 0.363636364 0.533333333 11 3 0 12 3L:16994208-16994242 7 15.5 2223 FBgn0261547 727.6666667 13.01 19.84 0.021300962 1.191391238 0.78125 -8 8 0 0.1 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 16994830 16994836 - 3L_16994830_16994836_- 0.823306392 0.823349411 0.823327902 3.04E-05 CG3764 FBtr0321285|FBtr0075297|FBtr0332122 16994715|16994715|16994715 16995408|16995408|16995408 3L - 16994823 16994858 3'utr CG3764 FlyBase G37507.1 AAGTTTAGAATACGCTAGGGATGCAGCTACTAAAAT 35 16994837 0.819794337 4 32 162 0.925 0.966141733 0.225 0.114285714 0.225 35 0 3 37 3L:16994823-16994858 7 CG3764 FBtr0332122|FBtr0321285|FBtr0075297 16994715|16994715|16994715 16995408|16995408|16995408 GCAGCTA 7mer-A1 dme-miR-980-3p 3L - 16994823 16994858 3'utr CG3764 FlyBase G28331.1 AAGTTTAGAATACGCTAGGGATGCAGCTACTAAAAT 29 16994837 0.797038955 4 26 112 0.930232558 1.301029996 0.11627907 0.379310345 0.581395349 29 2 1 40 3L:16994823-16994858 7 31.5 2224 FBgn0036684 919.4833333 18.43 28.02333333 0.03425837 1.709169832 1.124063281 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 16995271 16995277 - 3L_16995271_16995277_- 0.800511075 0.799791613 0.800151344 0.000508763 CG3764 FBtr0321285|FBtr0321285|FBtr0321285|FBtr0075297|FBtr0075297|FBtr0075297|FBtr0332122|FBtr0332122|FBtr0332122 16994715|16994715|16994715|16994715|16994715|16994715|16994715|16994715|16994715 16995408|16995408|16995408|16995408|16995408|16995408|16995408|16995408|16995408 3L - 16995191 16995444 stop_codon CG3764 FlyBase G37509.2 AAGATCAGCCGCAAGTGCGGCATCAGCTTCAGGTGACAGGTTGTTGCCGTCTGCTGAGCTAGGACATTGCCAAACATTTTATCACTCAACGTTTCAAAGAGCTCTTCTCATGCATCATCCAAAGCGAAACAAGCAAATACTCCAGCGAATTTTAATTTCACTGATTTTGTGATATATTTATATATGTGTAGGAATCTAGCGCCTAAATGCAGGATACGTTTATGAGCCGTAGCTTAGCCGTAGCCCTCGAACGA 438 16995279 0.941714361 46 399 4122 0.914342629 1.457692703 0.109561753 0.116438356 0.229083665 438 28 15 459 3L:16995191-16995444 7 CG3764 FBtr0332122|FBtr0332122|FBtr0332122|FBtr0321285|FBtr0321285|FBtr0321285|FBtr0075297|FBtr0075297|FBtr0075297 16994715|16994715|16994715|16994715|16994715|16994715|16994715|16994715|16994715 16995408|16995408|16995408|16995408|16995408|16995408|16995408|16995408|16995408 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 16995196 16995461 stop_codon CG3764 FlyBase G28333.2 CATATATTCACACGCCCAAGATCAGCCGCAAGTGCGGCATCAGCTTCAGGTGACAGGTTGTTGCCGTCTGCTGAGCTAGGACATTGCCAAACATTTTATCACTCAACGTTTCAAAGAGCTCTTCTCATGCATCATCCAAAGCGAAACAAGCAAATACTCCAGCGAATTTTAATTTCACTGATTTTGTGATATATTTATATATGTGTAGGAATCTAGCGCCTAAATGCAGGATACGTTTATGAGCCGTAGCTTAGCCGTAGCCCTCG 313 16995279 0.989109754 38 262 2654 0.856275304 1.450249108 0.133603239 0.38658147 0.611336032 313 57 14 423 3L:16995196-16995461 7 193.5 2225 FBgn0036684 919.4833333 18.43 28.02333333 0.210444271 10.49918611 6.904960152 2 2 2 0.1 dme-miR-2a-2-5p 7mer-A1 GATGAGA 3L 17013051 17013057 - 3L_17013051_17013057_- 0.782776268 0.782776532 0.7827764 1.41E-07 CG6664 FBtr0075293|FBtr0075294|FBtr0075295 17012884|17012884|17012884 17013449|17013449|17013449 3L - 17013025 17013092 3'utr CG6664 FlyBase G37540.1 AACACAGCTAATAATGAGATATGGAGGATATAGAGGATGAGAATGAGGATGGACAGCACACGCTAACC 32 17013055 0.953035123 4 30 135 0.942857143 1.51851394 0.114285714 0.09375 0.171428571 32 2 0 33 3L:17013025-17013092 7 CG6664 FBtr0075294|FBtr0075295|FBtr0075293 17012884|17012884|17012884 17013449|17013449|17013449 GATGAGA 7mer-A1 dme-miR-2a-2-5p 3L - 17013006 17013077 3'utr CG6664 FlyBase G28354.1 GAGATATGGAGGATATAGAGGATGAGAATGAGGATGGACAGCACACGCTAACCAGATCGTATGAATTTATAA 32 17013055 0.937619131 4 31 122 0.960784314 1.69019608 0.31372549 0.46875 0.666666667 32 2 0 49 3L:17013006-17013077 7 30.5 2226 FBgn0036685 1328.326667 65.44 100.8833333 0.022961219 0.466075795 0.302329423 -2 -2 -2 0.1 dme-miR-33-5p 8mer-A1 CAATGCAA 3L 17026910 17026917 + 3L_17026910_17026917_+ 0.633418939 0.359464003 0.496441471 0.193715368 Fit2 FBtr0075275 17026804 17027117 3L + 17026871 17026933 3'utr Fit2 FlyBase G31065.1 ACTGTTTTAACTGATAACCAACTGATAGACTCACAACTTCAATGCAATACATGTATTTAATTT 178 17026896 0.796616357 5 169 802 0.966824645 2.008600172 0.004739336 0.175141243 0.308056872 177 6 1 204 3L:17026871-17026933 8 Fit2 FBtr0075275 17026804 17027117 CAATGCAA 8mer-A1 dme-miR-33-5p 3L + 17026873 17026921 3'utr Fit2 FlyBase G23500.1 TGTTTTAACTGATAACCAACTGATAGACTCACAACTTCAATGCAATACA 141 17026896 0.796238215 6 136 574 0.955156951 1.726319612 0.004484305 0.397163121 0.618834081 141 7 3 213 3L:17026873-17026921 8 43.5 2227 FBgn0036688 86.10666667 3.683333333 5.58 0.505187365 11.80995475 7.795698925 14 14 14 0.1 dme-bantam-3p 6mer2-7 GATCTC 3L 17037339 17037344 - 3L_17037339_17037344_- 0.743167904 0.743559777 0.743363841 0.000277115 scaf6 FBtr0345067 17036857 17039577 3L - 17037326 17037364 5'utr scaf6 FlyBase G37551.1 AAGACGAGTGGACCGCGACAGATCTCTAACACCTCCGAG 41 17037338 0.782007136 2 41 125 1 1.662757832 0.543478261 0.12195122 0.217391304 41 0 0 46 3L:17037326-17037364 6 scaf6 FBtr0345067 17036857 17039577 GATCTC 6mer2-7 dme-bantam-3p 3L - 17037330 17037427 5'utr scaf6 FlyBase G28361.1 CAGAGAGGGCCGTGGTGATCGTGGCAATTCCAATAGCCGAGACAATGGCAACAGCACCAACCTAAGACGAGTGGACCGCGACAGATCTCTAACACCTC 23 17037338 0.907992266 6 21 71 1 1.477121255 0.4 0.260869565 0.433333333 23 0 0 30 3L:17037330-17037427 6 29 2228 FBgn0261872 719.3333333 34.71333333 53.11 0.040315107 0.835413866 0.546036528 -6 -6 -6 0.1 dme-bantam-3p 6mer2-7 GATCTC 3L 17037468 17037473 - 3L_17037468_17037473_- 0.999999983 0.99999972 0.999999852 2.12E-07 scaf6 FBtr0345067 17036857 17039577 3L - 17037447 17037486 5'utr scaf6 FlyBase G37552.1 AAGGGTCGCAATCGATCTCCTCGCCACGAACGGGACAACA 6 17037466 0.940005926 2 6 24 1 0.77815125 0.166666667 0 0 6 0 0 6 3L:17037447-17037486 6 scaf6 FBtr0345067 17036857 17039577 GATCTC 6mer2-7 dme-bantam-3p 3L - 17037455 17037496 5'utr scaf6 FlyBase G28362.1 TAACAACCGCAAGGGTCGCAATCGATCTCCTCGCCACGAACG 6 17037475 0.937522995 3 6 24 1 0.903089987 0.5 0.333333333 0.5 6 0 0 8 3L:17037455-17037496 6 6 2229 FBgn0261872 719.3333333 34.71333333 53.11 0.008341057 0.172844248 0.112973075 -7 2 -2.5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3L 17041316 17041322 - 3L_17041316_17041322_- 0.822732224 0.823337155 0.82303469 0.0004278 scaf6 FBtr0301554 17040932 17041684 3L - 17041291 17041347 5'utr scaf6 FlyBase G37556.1 ATATACTTTCGGACTTAAATGATTTCCAAAGATATTGTCATAGACTCATAGATGGCA 6 17041324 0.98004601 3 6 48 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3L:17041291-17041347 7 scaf6 FBtr0301554 17040932 17041684 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 17041292 17041338 5'utr scaf6 FlyBase G28366.1 CGGACTTAAATGATTTCCAAAGATATTGTCATAGACTCATAGATGGC 10 17041324 0.753904865 4 10 71 1 1.041392685 0 0.1 0.181818182 10 0 0 11 3L:17041292-17041338 7 7 2230 FBgn0261872 719.3333333 34.71333333 53.11 0.009731233 0.201651623 0.131801921 2 2 2 0.1 dme-miR-932-5p 7mer-A1 GAATTGA 3L 17054769 17054775 + 3L_17054769_17054775_+ 0.823349562 0.823349562 0.823349562 0 rogdi FBtr0075282|FBtr0075283 17054365|17054365 17055454|17055454 3L + 17054726 17054822 3'utr rogdi FlyBase G31086.1 CTCCAATTATGCATCAAAATGCATCTAAATAGCATTAGGCTGAGAATTGAGAACAGAGAACGTTTGTGAAAACCAATTGTGTTTGTATGTGTAACAA 53 17054760 0.927686308 10 53 244 1 1.806179974 0.265625 0.132075472 0.28125 53 0 0 64 3L:17054726-17054822 7 rogdi FBtr0075283|FBtr0075282 17054365|17054365 17055454|17055454 GAATTGA 7mer-A1 dme-miR-932-5p 3L + 17054746 17054821 3'utr rogdi FlyBase G23516.1 GCATCTAAATAGCATTAGGCTGAGAATTGAGAACAGAGAACGTTTGTGAAAACCAATTGTGTTTGTATGTGTAACA 36 17054772 0.688269252 8 35 150 1 1.77815125 0.133333333 0.444444444 0.666666667 36 0 0 60 3L:17054746-17054821 7 35 2231 FBgn0036697 653.9633333 39.12 59.84 0.05351982 0.894683027 0.584893048 9 -3 3 0.1 dme-miR-252-5p 7mer-m8 GTACTTA 3L 17055319 17055325 + 3L_17055319_17055325_+ 0.588299836 0.588299884 0.58829986 7.07E-08 rogdi FBtr0075282|FBtr0075283 17054365|17054365 17055454|17055454 3L + 17055306 17055331 3'utr rogdi FlyBase G31088.1 AACAATTACCACTGTACTTATTGAAT 8 17055318 0.7761632 3 8 58 1 1.041392685 0 0.375 0.545454545 8 0 0 11 3L:17055306-17055331 7 rogdi FBtr0075283|FBtr0075282 17054365|17054365 17055454|17055454 GTACTTA 7mer-m8 dme-miR-252-5p 3L + 17055299 17055328 3'utr rogdi FlyBase G23518.1 CAACGAAAACAATTACCACTGTACTTATTG 8 17055318 0.96245563 3 7 52 0.909090909 1 0.636363636 0.25 0.454545455 8 1 0 10 3L:17055299-17055328 7 8 2232 FBgn0036697 653.9633333 39.12 59.84 0.012233102 0.204498978 0.13368984 1 1 1 0.1 dme-miR-276a-3p 6mer3-8 AGTTCC 3L 1716321 1716326 - 3L_1716321_1716326_- 0.999988088 0.999988646 0.999988367 3.54E-07 drpr FBtr0334080|FBtr0309845 1715593|1715708 1716704|1716704 3L - 1716305 1716359 3'utr drpr FlyBase G33460.1 ACCAACCTGGACAACGTGTCGACGGCGTCGCCTAGTTCCAGTCCGAAATTTCTAA 7 1716324 0.9526497 4 7 32 1 1 0 0.428571429 0.6 7 0 0 10 3L:1716305-1716359 6 drpr FBtr0309845|FBtr0334080 1715708|1715593 1716704|1716704 AGTTCC 6mer3-8 dme-miR-276a-3p 3L - 1716313 1716345 3'utr drpr FlyBase G25308.1 CGTGTCGACGGCGTCGCCTAGTTCCAGTCCGAA 5 1716324 0.739953545 2 5 26 1 0.84509804 0.285714286 0.2 0.428571429 5 0 0 7 3L:1716313-1716345 6 5 2233 FBgn0027594 1820.973333 52.11666667 79.25333333 0.002745784 0.095938599 0.063088829 -2 -2 -2 0.1 dme-miR-283-5p 8mer-m1 TGATATTT 3L 174070 174077 + 3L_174070_174077_+ 0.523920731 0.510722129 0.51732143 0.00933282 p130CAS FBtr0299866|FBtr0072475|FBtr0299864|FBtr0299865|FBtr0301889 173907|173907|173907|173907|173907 174517|174517|174517|174517|174517 3L + 174048 174092 3'utr p130CAS FlyBase G26680.1 TTGCCGCTTATATTTTGCATTGTGATATTTTGAGCAAAACATCTG 23 174067 0.988120099 9 20 254 0.891891892 1.041392685 0.054054054 0.347826087 0.594594595 23 2 2 33 3L:174048-174092 8 p130CAS FBtr0299865|FBtr0299864|FBtr0072475|FBtr0299866|FBtr0301889 173907|173907|173907|173907|173907 174517|174517|174517|174517|174517 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 174049 174086 3'utr p130CAS FlyBase G20176.1 TGCCGCTTATATTTTGCATTGTGATATTTTGAGCAAAA 16 174066 0.664186215 5 14 176 0.769230769 0.823908741 0.269230769 0.4375 0.653846154 16 4 2 20 3L:174049-174086 8 19.5 2234 FBgn0035101 655.3333333 27.27 41.73 0.029755849 0.715071507 0.46728972 3 4 3.5 0.1 dme-miR-184-5p 8mer-m1 TGATAAGG 3L 17429142 17429149 - 3L_17429142_17429149_- 0.614707788 0.614696074 0.614701931 8.27E-06 frc FBtr0299820 17428934 17431853 3L - 17429122 17429175 stop_codon frc FlyBase G37592.1 TGGGCATTACTGTGCTGAATAAAGCTTGATAAGGCTGTTTATTTTTAAGCCCAT 36 17429146 0.991150602 4 34 364 0.948717949 1.091080469 0.102564103 0.055555556 0.128205128 36 0 2 37 3L:17429122-17429175 8 frc FBtr0299820 17428934 17431853 TGATAAGG 8mer-m1 dme-miR-184-5p 3L - 17429124 17429165 stop_codon frc FlyBase G28385.1 TGTGCTGAATAAAGCTTGATAAGGCTGTTTATTTTTAAGCCC 10 17429146 0.883782039 3 10 93 1 1.204119983 0.125 0.4 0.625 10 0 0 16 3L:17429124-17429165 8 22 2235 FBgn0042641 378.7 26.37333333 40.25 0.058093478 0.834175935 0.546583851 -3 -3 -3 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 17431536 17431542 - 3L_17431536_17431542_- 0.66130636 0.661449631 0.661377995 0.000101258 frc FBtr0299820 17428934 17431853 3L - 17431520 17431606 5'utr frc FlyBase G37593.1 AAGAAATAGAAATACACAGACTTCCACTCCTCCGCCTACGGAATGGGTGGGCCAGATAAACAATTGTGTTCCGTCTTCTGTTCCATT 53 17431563 0.883225139 10 49 258 0.935483871 1.286306739 0.064516129 0.132075472 0.258064516 53 2 2 58 3L:17431520-17431606 7 frc FBtr0299820 17428934 17431853 TGTGTTC 7mer-m8 dme-miR-317-3p 3L - 17431525 17431606 5'utr frc FlyBase G28386.1 AAGAAATAGAAATACACAGACTTCCACTCCTCCGCCTACGGAATGGGTGGGCCAGATAAACAATTGTGTTCCGTCTTCTGTT 35 17431543 0.852131848 9 31 184 0.883333333 1.423245874 0.05 0.485714286 0.7 35 6 1 53 3L:17431525-17431606 7 10 2236 FBgn0042641 378.7 26.37333333 40.25 0.026406126 0.37917088 0.248447205 21 1 11 0.1 dme-miR-190-5p 6mer3-8 ACATAT 3L 17431709 17431714 - 3L_17431709_17431714_- 0.581534756 0.999924153 0.790729454 0.295845982 frc FBtr0075228|FBtr0299820 17431580|17428934 17431853|17431853 3L - 17431700 17431740 5'utr frc FlyBase G37595.1 ACAACCACACAGCGCATCGTCTCTGTACATATATCTAGCTA 26 17431717 0.70971204 3 21 143 0.868421053 1.217483944 0.026315789 0.307692308 0.526315789 26 4 1 33 3L:17431700-17431740 6 frc FBtr0075228|FBtr0299820 17431580|17428934 17431853|17431853 ACATAT 6mer3-8 dme-miR-190-5p 3L - 17431702 17431792 5'utr frc FlyBase G28388.1 GTACTTCAATTGCGATCTGCGATTCGCGACAACGTTCGTATTTGATTTTCCTACAACCACACAGCGCATCGTCTCTGTACATATATCTAGC 35 17431718 0.679403284 11 32 223 0.944444444 1.707570176 0.018518519 0.457142857 0.648148148 35 3 0 51 3L:17431702-17431792 6 14.5 2237 FBgn0042641 378.7 26.37333333 40.25 0.038288883 0.549797776 0.360248447 3 4 3.5 0.1 dme-miR-252-5p 6mer3-8 GTACTT 3L 17431787 17431792 - 3L_17431787_17431792_- 0.999958304 0.866093194 0.933025749 0.09465692 frc FBtr0075228|FBtr0299820 17431580|17428934 17431853|17431853 3L - 17431751 17431792 5'utr frc FlyBase G37595.2 GTACTTCAATTGCGATCTGCGATTCGCGACAACGTTCGTATT 45 17431781 0.688156702 5 40 276 0.888888889 1.380211242 0.092592593 0.133333333 0.277777778 45 5 1 48 3L:17431751-17431792 6 frc FBtr0075228|FBtr0299820 17431580|17428934 17431853|17431853 GTACTT 6mer3-8 dme-miR-252-5p 3L - 17431702 17431792 5'utr frc FlyBase G28388.1 GTACTTCAATTGCGATCTGCGATTCGCGACAACGTTCGTATTTGATTTTCCTACAACCACACAGCGCATCGTCTCTGTACATATATCTAGC 35 17431779 0.679403284 11 32 223 0.944444444 1.707570176 0.018518519 0.457142857 0.648148148 35 3 0 51 3L:17431702-17431792 6 13.5 2238 FBgn0042641 378.7 26.37333333 40.25 0.03564827 0.511880688 0.335403727 -11 -13 -12 0.1 dme-miR-970-3p 8mer-A1 TCTTATGA 3L 17477817 17477824 - 3L_17477817_17477824_- 0.630786862 0.630785645 0.630786254 9.19E-07 CG13733 FBtr0075225 17477793 17477948 3L - 17477810 17477841 3'utr CG13733 FlyBase G37602.1 ACATACATATATAGATCTCTTATGAACAGTAA 30 17477822 0.702536344 4 30 224 1 1.633468456 0 0.266666667 0.488372093 30 0 0 43 3L:17477810-17477841 8 CG13733 FBtr0075225 17477793 17477948 TCTTATGA 8mer-A1 dme-miR-970-3p 3L - 17477811 17477841 3'utr CG13733 FlyBase G28400.1 ACATACATATATAGATCTCTTATGAACAGTA 23 17477821 0.71618281 5 23 174 1 1.544068044 0 0.391304348 0.6 23 0 0 35 3L:17477811-17477841 8 26.5 2239 FBgn0036729 1.666666667 0.2 0.32 15.9 132.5 82.8125 -2 -3 -2.5 0.1 dme-miR-986-5p 6mer2-7 TTCGAG 3L 17511230 17511235 + 3L_17511230_17511235_+ 0.977444073 0.982891701 0.980167887 0.003852035 Oatp74D FBtr0075173|FBtr0345117|FBtr0345118|FBtr0302041 17511094|17511094|17511094|17511094 17511693|17511693|17511693|17511693 3L + 17511094 17511259 stop_codon Oatp74D FlyBase G31134.1 AGGAGGAGCGGGTCGGCGACGAGCCTTGCACAAGCTGCAGGATTTCCAATAAACGTTTACCTTAATTGTTAATTAGTTATCATTTGTCTAGTTTGTTAGCCTAGTGCAAGAGTTATGTATTTAGTTAAGTGGCATCTTCGAGCGTCGGGAGACCTCATTCAAATCC 43 17511251 0.909561965 16 38 309 0.901960784 1.662757832 0.254901961 0.162790698 0.294117647 43 5 0 46 3L:17511094-17511259 6 Oatp74D FBtr0302041|FBtr0345118|FBtr0345117|FBtr0075173 17511094|17511094|17511094|17511094 17511693|17511693|17511693|17511693 TTCGAG 6mer2-7 dme-miR-986-5p 3L + 17511208 17511254 3'utr Oatp74D FlyBase G23551.1 ATGTATTTAGTTAAGTGGCATCTTCGAGCGTCGGGAGACCTCATTCA 12 17511238 0.738013071 7 11 68 0.95 1.278753601 0.35 0.416666667 0.65 12 1 0 19 3L:17511208-17511254 6 14.5 2240 FBgn0036732 1106.486667 32.79 50.10666667 0.013104541 0.44220799 0.28938265 -21 -8 -14.5 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA 3L 17511461 17511466 + 3L_17511461_17511466_+ 0.999991216 0.999989626 0.999990421 1.13E-06 Oatp74D FBtr0075173|FBtr0345117|FBtr0345118|FBtr0302041 17511094|17511094|17511094|17511094 17511693|17511693|17511693|17511693 3L + 17511439 17511476 3'utr Oatp74D FlyBase G31136.1 TACTACAAACTGATCGACAATTGTGCAAAGTGCAAGAA 16 17511459 0.749004196 3 16 72 1 1.322219295 0.333333333 0.3125 0.476190476 16 0 0 21 3L:17511439-17511476 6 Oatp74D FBtr0302041|FBtr0345118|FBtr0345117|FBtr0075173 17511094|17511094|17511094|17511094 17511693|17511693|17511693|17511693 GTGCAA 6mer3-8 dme-miR-92b-3p 3L + 17511439 17511471 3'utr Oatp74D FlyBase G23553.1 TACTACAAACTGATCGACAATTGTGCAAAGTGC 16 17511459 0.729533522 2 14 79 0.884615385 1.06069784 0.807692308 0.4375 0.653846154 16 2 1 23 3L:17511439-17511471 6 15 2241 FBgn0036732 1106.486667 32.79 50.10666667 0.013556422 0.457456542 0.299361362 2 2 2 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA 3L 17525937 17525942 - 3L_17525937_17525942_- 0.999993922 0.999997186 0.999995554 2.33E-06 Edc3 FBtr0075208 17525331 17526958 3L - 17525921 17526032 3'utr Edc3 FlyBase G37610.1 CATCGAATACTAAAAAGAAACCACAACACAATACTTATAATATAAACTGTAGAGCGATTAATTTTATATAAGATTAAATCCAATCTAATAGTGCAAAATTTTAGAAGGTTGC 32 17525944 0.982202803 5 31 222 0.948717949 1.568201724 0 0.1875 0.333333333 32 2 0 37 3L:17525921-17526032 6 Edc3 FBtr0075208 17525331 17526958 GTGCAA 6mer3-8 dme-miR-92b-3p 3L - 17525919 17525985 3'utr Edc3 FlyBase G28407.1 TGTAGAGCGATTAATTTTATATAAGATTAAATCCAATCTAATAGTGCAAAATTTTAGAAGGTTGCGA 20 17525944 0.980601489 3 19 141 1 1.462397998 0 0.3 0.517241379 20 0 0 29 3L:17525919-17525985 6 21.5 2242 FBgn0036735 1377.103333 41.10333333 63.21333333 0.015612481 0.523071933 0.340118119 2 2 2 0.1 dme-miR-7-5p 6mer3-8 GTCTTC 3L 17526409 17526414 - 3L_17526409_17526414_- 0.999999865 0.999999979 0.999999922 7.07E-08 Edc3 FBtr0075208 17525331 17526958 3L - 17526393 17526442 3'utr Edc3 FlyBase G37613.1 TTACAATTCACTGTCCTTCCTGCAAGTGGTCTTCATAATCGTAAACAACA 16 17526416 0.85685172 3 16 136 1 1.204119983 0 0 0 16 0 0 16 3L:17526393-17526442 6 Edc3 FBtr0075208 17525331 17526958 GTCTTC 6mer3-8 dme-miR-7-5p 3L - 17526390 17526445 3'utr Edc3 FlyBase G28410.1 AATTTACAATTCACTGTCCTTCCTGCAAGTGGTCTTCATAATCGTAAACAACAAAT 15 17526416 0.905317979 5 12 121 0.769230769 1.301029996 0.076923077 0.466666667 0.692307692 15 6 0 20 3L:17526390-17526445 6 13 2243 FBgn0036735 1377.103333 41.10333333 63.21333333 0.009440105 0.316276052 0.205652816 2 2 2 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 17526799 17526804 - 3L_17526799_17526804_- 0.999377056 0.999771324 0.99957419 0.000278741 Edc3 FBtr0075208|FBtr0075208|FBtr0075208 17525331|17525331|17525331 17526958|17526958|17526958 3L - 17526739 17526857 3'utr Edc3 FlyBase G37616.1 AACAATAACAATGACACACCCGCACACTTGTGATGATCATCAAGTCCAGTTTCCTGTGAATCTAGCTCTTAGTACTCTTCTCTCATATATTACTCAAGTTAAACATTTTGTTCTACGGC 151 17526829 0.986511311 23 133 1144 0.876344086 1.257945095 0.080645161 0.17218543 0.327956989 151 15 8 163 3L:17526739-17526857 6 Edc3 FBtr0075208|FBtr0075208|FBtr0075208 17525331|17525331|17525331 17526958|17526958|17526958 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 17526764 17526847 3'utr Edc3 FlyBase G28414.1 ATGACACACCCGCACACTTGTGATGATCATCAAGTCCAGTTTCCTGTGAATCTAGCTCTTAGTACTCTTCTCTCATATATTACT 110 17526808 0.796905252 19 99 883 0.911949686 1.207125493 0.100628931 0.345454545 0.547169811 110 6 8 145 3L:17526764-17526847 6 58 2244 FBgn0036735 1377.103333 41.10333333 63.21333333 0.042117391 1.411077771 0.917527948 25 4 14.5 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA 3L 17526822 17526827 - 3L_17526822_17526827_- 0.838907732 0.667214611 0.753061172 0.121405355 Edc3 FBtr0075208 17525331 17526958 3L - 17526739 17526857 3'utr Edc3 FlyBase G37616.1 AACAATAACAATGACACACCCGCACACTTGTGATGATCATCAAGTCCAGTTTCCTGTGAATCTAGCTCTTAGTACTCTTCTCTCATATATTACTCAAGTTAAACATTTTGTTCTACGGC 151 17526829 0.986511311 23 133 1144 0.876344086 1.257945095 0.080645161 0.17218543 0.327956989 151 15 8 163 3L:17526739-17526857 6 Edc3 FBtr0075208 17525331 17526958 TGATGA 6mer3-8 dme-miR-2a-2-5p 3L - 17526764 17526847 3'utr Edc3 FlyBase G28414.1 ATGACACACCCGCACACTTGTGATGATCATCAAGTCCAGTTTCCTGTGAATCTAGCTCTTAGTACTCTTCTCTCATATATTACT 110 17526808 0.796905252 19 99 883 0.911949686 1.207125493 0.100628931 0.345454545 0.547169811 110 6 8 145 3L:17526764-17526847 6 51.5 2245 FBgn0036735 1377.103333 41.10333333 63.21333333 0.037397339 1.252939745 0.81470154 2 -19 -8.5 0.1 dme-miR-252-5p 7mer-m8 GTACTTA 3L 17545826 17545832 + 3L_17545826_17545832_+ 0.588299917 0.588299917 0.588299917 0 Nedd4 FBtr0300520|FBtr0299642|FBtr0331843|FBtr0299647|FBtr0299645|FBtr0299648|FBtr0300519|FBtr0331844|FBtr0299646 17545609|17545609|17545609|17545609|17545609|17545609|17545609|17545609|17545609 17546376|17546376|17546376|17546376|17546376|17546376|17546660|17546376|17546376 3L + 17545812 17545897 3'utr Nedd4 FlyBase G31149.1 CGCCAGCAGATCGTGTACTTATTTGTTCGTTTGCTTTTGTATTATAATCATTTTTGCTAGTTTAGTGTTATTTCGTATGTATTTTA 23 17545825 0.991552874 9 19 214 0.892857143 0.920818754 0.142857143 0.173913043 0.321428571 23 1 2 25 3L:17545812-17545897 7 Nedd4 FBtr0299646|FBtr0331844|FBtr0300519|FBtr0299648|FBtr0299645|FBtr0299647|FBtr0331843|FBtr0299642|FBtr0300520 17545609|17545609|17545609|17545609|17545609|17545609|17545609|17545609|17545609 17546376|17546376|17546660|17546376|17546376|17546376|17546376|17546376|17546376 GTACTTA 7mer-m8 dme-miR-252-5p 3L + 17545811 17545847 3'utr Nedd4 FlyBase G23564.2 CCGCCAGCAGATCGTGTACTTATTTGTTCGTTTGCTT 21 17545833 0.648828154 6 17 172 0.787878788 0.716003344 0.121212121 0.333333333 0.575757576 21 3 4 26 3L:17545811-17545847 7 17.5 2246 FBgn0259174 1914.91 63.1 97.11 0.009138811 0.277337559 0.180208012 1 -7 -3 0.1 dme-miR-79-3p 7mer-m8 TAGCTTT 3L 17551897 17551903 - 3L_17551897_17551903_- 0.620125369 0.620162153 0.620143761 2.60E-05 CycT FBtr0333125|FBtr0333124 17551002|17551002 17552803|17552803 3L - 17551882 17551923 3'utr CycT FlyBase G37630.1 GATCGCCTGGAACGTTGACGTAGCTTTCATTTGTTTTAATTT 13 17551903 0.782869023 7 12 113 0.923076923 1.079181246 0.461538462 0 0 13 1 0 12 3L:17551882-17551923 7 CycT FBtr0333125|FBtr0333124 17551002|17551002 17552803|17552803 TAGCTTT 7mer-m8 dme-miR-79-3p 3L - 17551882 17551933 3'utr CycT FlyBase G28426.1 TATGTTTCAAGATCGCCTGGAACGTTGACGTAGCTTTCATTTGTTTTAATTT 13 17551893 0.975113041 6 13 113 1 1.322219295 0.333333333 0.461538462 0.666666667 13 0 0 21 3L:17551882-17551933 7 11.5 2247 FBgn0025455 628.69 14.30666667 21.88666667 0.018292004 0.803821062 0.525434054 0 -10 -5 0.1 dme-miR-305-5p 6mer3-8 AGTACA 3L 17552323 17552328 - 3L_17552323_17552328_- 0.999999999 0.999928634 0.999964317 5.05E-05 CycT FBtr0333125|FBtr0333124 17551002|17551002 17552803|17552803 3L - 17552301 17552343 3'utr CycT FlyBase G37633.1 AATCAAGAGATATATAGTACAGACTTCCGCTTAGCAAATATAC 21 17552329 0.810129816 5 18 121 0.8 0.823908741 0.12 0.19047619 0.32 21 3 2 20 3L:17552301-17552343 6 CycT FBtr0333125|FBtr0333124 17551002|17551002 17552803|17552803 AGTACA 6mer3-8 dme-miR-305-5p 3L - 17552311 17552343 3'utr CycT FlyBase G28430.1 AATCAAGAGATATATAGTACAGACTTCCGCTTA 8 17552329 0.785416965 3 7 41 0.909090909 1 0 0.25 0.454545455 8 1 0 10 3L:17552311-17552343 6 14 2248 FBgn0025455 628.69 14.30666667 21.88666667 0.022268527 0.978564772 0.639658849 1 1 1 0.1 dme-miR-92b-3p 7mer-m8 GTGCAAT 3L 17560428 17560434 - 3L_17560428_17560434_- 0.659000076 0.659000076 0.659000076 0 Eip74EF FBtr0075203|FBtr0075204|FBtr0100411|FBtr0075202|FBtr0305796 17560156|17560156|17558670|17560156|17560156 17561769|17561769|17561769|17561769|17561769 3L - 17560408 17560458 3'utr Eip74EF FlyBase G37660.1 CAATTTCCAAACACTGCCCAAAACGTGCAATCTCTTGAAAGGATACCTTGA 11 17560433 0.887387584 5 10 53 0.916666667 1.041392685 0.083333333 0.090909091 0.166666667 11 1 0 11 3L:17560408-17560458 7 Eip74EF FBtr0075203|FBtr0305796|FBtr0075202|FBtr0100411|FBtr0075204 17560156|17560156|17560156|17558670|17560156 17561769|17561769|17561769|17561769|17561769 GTGCAAT 7mer-m8 dme-miR-92b-3p 3L - 17560401 17560444 3'utr Eip74EF FlyBase G28448.1 TGCCCAAAACGTGCAATCTCTTGAAAGGATACCTTGAATAGGAA 6 17560433 0.96192971 3 6 34 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 3L:17560401-17560444 7 7 2249 FBgn0000567 175.3133333 4.123333333 6.33 0.039928509 1.697655618 1.105845182 -1 -1 -1 0.1 dme-bantam-3p 6mer3-8 TGATCT 3L 17561167 17561172 - 3L_17561167_17561172_- 0.999999297 0.999999285 0.999999291 0 Eip74EF FBtr0075203|FBtr0075204|FBtr0100411|FBtr0075202|FBtr0305796 17560156|17560156|17558670|17560156|17560156 17561769|17561769|17561769|17561769|17561769 3L - 17561154 17561193 3'utr Eip74EF FlyBase G37664.1 CAAGAATTTCTCTATCTCTATTGATCTAATGCTAAATCTA 17 17561173 0.699280383 5 16 160 0.954545455 1.322219295 0.136363636 0.235294118 0.409090909 17 1 0 21 3L:17561154-17561193 6 Eip74EF FBtr0075203|FBtr0305796|FBtr0075202|FBtr0100411|FBtr0075204 17560156|17560156|17560156|17558670|17560156 17561769|17561769|17561769|17561769|17561769 TGATCT 6mer3-8 dme-bantam-3p 3L - 17561157 17561192 3'utr Eip74EF FlyBase G28451.1 AAGAATTTCTCTATCTCTATTGATCTAATGCTAAAT 7 17561173 0.721636197 4 7 74 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3L:17561157-17561192 6 12 2250 FBgn0000567 175.3133333 4.123333333 6.33 0.068448872 2.910266774 1.895734597 1 1 1 0.1 dme-miR-283-5p 7mer-m8 TGATATT 3L 17561240 17561246 - 3L_17561240_17561246_- 0.511460583 0.613704512 0.562582548 0.072297355 Eip74EF FBtr0075203|FBtr0075204|FBtr0100411|FBtr0075202|FBtr0305796 17560156|17560156|17558670|17560156|17560156 17561769|17561769|17561769|17561769|17561769 3L - 17561205 17561278 3'utr Eip74EF FlyBase G37665.1 AGAGGACGAAGGACGACCGAATTGATTCATATTGATATTCGATAGATGTGTGTAATATGTAAATGAGTACGAAC 12 17561257 0.983680556 5 9 68 0.714285714 1 0.285714286 0.083333333 0.214285714 12 4 0 10 3L:17561205-17561278 7 Eip74EF FBtr0075203|FBtr0305796|FBtr0075202|FBtr0100411|FBtr0075204 17560156|17560156|17560156|17558670|17560156 17561769|17561769|17561769|17561769|17561769 TGATATT 7mer-m8 dme-miR-283-5p 3L - 17561225 17561271 3'utr Eip74EF FlyBase G28452.1 GAAGGACGACCGAATTGATTCATATTGATATTCGATAGATGTGTGTA 7 17561247 0.985221532 4 7 58 1 1.041392685 0.363636364 0.428571429 0.636363636 7 0 0 11 3L:17561225-17561271 7 6.5 2251 FBgn0000567 175.3133333 4.123333333 6.33 0.037076473 1.576394503 1.02685624 11 1 6 0.1 dme-bantam-3p 6mer3-8 TGATCT 3L 17561432 17561437 - 3L_17561432_17561437_- 0.999999908 0.999999885 0.999999897 0 Eip74EF FBtr0075203|FBtr0075204|FBtr0100411|FBtr0075202|FBtr0305796 17560156|17560156|17558670|17560156|17560156 17561769|17561769|17561769|17561769|17561769 3L - 17561347 17561491 3'utr Eip74EF FlyBase G37666.1 ACACCCTGTGTCCTGTACCCTATACATACACCCAGCTAAATCGACGGTAAATAATGATCTATTCATGGGCGTTAGTGTTGTACTTGTAACTGTAGATTTAACTGTAAACTGTAACTGTAATGAATATTGTTATTATTGGTTATTA 87 17561437 0.986486788 14 81 695 0.919191919 1.959041392 0.070707071 0.137931034 0.242424242 87 8 0 91 3L:17561347-17561491 6 Eip74EF FBtr0075203|FBtr0305796|FBtr0075202|FBtr0100411|FBtr0075204 17560156|17560156|17560156|17558670|17560156 17561769|17561769|17561769|17561769|17561769 TGATCT 6mer3-8 dme-bantam-3p 3L - 17561377 17561491 3'utr Eip74EF FlyBase G28453.1 ACACCCTGTGTCCTGTACCCTATACATACACCCAGCTAAATCGACGGTAAATAATGATCTATTCATGGGCGTTAGTGTTGTACTTGTAACTGTAGATTTAACTGTAAACTGTAAC 47 17561437 0.770845622 14 46 360 0.955882353 1.812913357 0.191176471 0.340425532 0.544117647 47 3 0 65 3L:17561377-17561491 6 45.5 2252 FBgn0000567 175.3133333 4.123333333 6.33 0.259535308 11.03476152 7.187993681 0 0 0 0.1 dme-miR-1008-3p 8mer-A1 AGCTGTGA 3L 1759130 1759137 + 3L_1759130_1759137_+ 0.637258823 0.638796171 0.638027497 0.001087106 CG8001 FBtr0334073|FBtr0300292|FBtr0334074|FBtr0072774 1759035|1759035|1759035|1759035 1759208|1759208|1759208|1759208 3L + 1759111 1759156 3'utr CG8001 FlyBase G27208.1 TGTTAGAAAGCGTTTCTGAAGCTGTGAATTTGTAACCGTAACACAT 72 1759126 0.678658016 8 68 594 0.952941176 1.607455023 0.235294118 0.138888889 0.270588235 72 3 1 81 3L:1759111-1759156 8 CG8001 FBtr0334074|FBtr0072774|FBtr0334073|FBtr0300292 1759035|1759035|1759035|1759035 1759208|1759208|1759208|1759208 AGCTGTGA 8mer-A1 dme-miR-1008-3p 3L + 1759106 1759156 3'utr CG8001 FlyBase G20596.1 AACTATGTTAGAAAGCGTTTCTGAAGCTGTGAATTTGTAACCGTAACACAT 55 1759127 0.71612987 8 52 453 0.941176471 1.425968732 0.458823529 0.454545455 0.647058824 55 3 2 80 3L:1759106-1759156 8 63 2253 FBgn0035268 473.3333333 22.80666667 34.95333333 0.133098592 2.76235019 1.802403204 4 3 3.5 0.1 dme-miR-308-3p 8mer-m1 CTGTGATT 3L 17630070 17630077 + 3L_17630070_17630077_+ 0.383156146 0.382956016 0.383056081 0.000141492 CG7510 FBtr0333121|FBtr0075182 17629985|17629985 17630971|17630480 3L + 17630028 17630124 3'utr CG7510 FlyBase G31157.1 CTTGATTTCCTGTTTAGTTTATTTTGAATGTAATTTTGACTGCTGTGATTGTACGCCAAACAAGAACGCACACACAATGCAGTCAGTTGTGTGTGGG 151 17630077 0.756423141 12 144 1193 0.954545455 2.225309282 0.068181818 0.125827815 0.25 151 8 0 168 3L:17630028-17630124 8 CG7510 FBtr0333121|FBtr0075182 17629985|17629985 17630971|17630480 CTGTGATT 8mer-m1 dme-miR-308-3p 3L + 17630046 17630124 3'utr CG7510 FlyBase G23571.1 TTATTTTGAATGTAATTTTGACTGCTGTGATTGTACGCCAAACAAGAACGCACACACAATGCAGTCAGTTGTGTGTGGG 111 17630077 0.79662595 11 104 864 0.977142857 2.23299611 0.165714286 0.405405405 0.622857143 111 4 0 171 3L:17630046-17630124 8 120 2254 FBgn0036741 369.9166667 11.27333333 17.24666667 0.324397387 10.644589 6.957866254 -7 -7 -7 0.1 dme-miR-92b-3p 8mer-A1 GTGCAATA 3L 17630264 17630271 + 3L_17630264_17630271_+ 0.56595184 0.607073076 0.586512458 0.02907715 CG7510 FBtr0333121|FBtr0075182 17629985|17629985 17630971|17630480 3L + 17630251 17630289 3'utr CG7510 FlyBase G31159.1 AGAGCTTTATGCAGTGCAATATAGAATACTGAATGTAAC 6 17630260 0.969192641 2 6 33 1 0.954242509 0.333333333 0.333333333 0.555555556 6 0 0 9 3L:17630251-17630289 8 CG7510 FBtr0333121|FBtr0075182 17629985|17629985 17630971|17630480 GTGCAATA 8mer-A1 dme-miR-92b-3p 3L + 17630246 17630290 3'utr CG7510 FlyBase G23573.1 CAGCTAGAGCTTTATGCAGTGCAATATAGAATACTGAATGTAACA 6 17630259 0.862561536 5 6 34 1 0.84509804 0.428571429 0.166666667 0.285714286 6 0 0 7 3L:17630246-17630290 8 5 2255 FBgn0036741 369.9166667 11.27333333 17.24666667 0.013516558 0.443524542 0.289911094 4 5 4.5 0.1 dme-miR-7-5p 6mer2-7 TCTTCC 3L 17638389 17638394 - 3L_17638389_17638394_- 0.962005804 0.94526637 0.953636087 0.011836543 Pep FBtr0075200|FBtr0304977|FBtr0075198|FBtr0075199 17638101|17638101|17638116|17638101 17638504|17638504|17640026|17638504 3L - 17638306 17638516 stop_codon Pep FlyBase G37675.1 AATCGCTACTAAGTAGACGTCGAAGGAATTCGTAATTTAACATAACATAAACCTTAATATACAAGAAAAAATTTACATTCACGCCCAGGAGGAGGATGAAGAAAGAACAGATCAAATCGATCTCTTCCCGCAATTTGACATTTGCATCCCAATTTGCATATACACTGAATGAATGGAAACTGAGAAGAAGACGGTCAACTTTTAGTTGAAA 350 17638392 0.799441887 34 344 1763 0.98630137 2.635483747 0.205479452 0.202857143 0.363013699 350 6 0 432 3L:17638306-17638516 6 Pep FBtr0075198 17638116 17640026 TCTTCC 6mer2-7 dme-miR-7-5p 3L - 17638262 17638450 3'utr Pep FlyBase G28460.1 AAAAATTTACATTCACGCCCAGGAGGAGGATGAAGAAAGAACAGATCAAATCGATCTCTTCCCGCAATTTGACATTTGCATCCCAATTTGCATATACACTGAATGAATGGAAACTGAGAAGAAGACGGTCAACTTTTAGTTGAAACAGTTGAATATATTGTACGACGAAGCTTCTTGAAACTGACGAGG 238 17638392 0.999991375 18 234 1184 0.980337079 2.542825427 0.18258427 0.340336134 0.558988764 238 7 0 349 3L:17638262-17638450 6 237 2256 FBgn0004401 3496.79 156.06 239.5966667 0.067776446 1.518646674 0.989162342 -2 -2 -2 0.1 dme-miR-184-5p 6mer3-8 TGATAA 3L 17638884 17638889 - 3L_17638884_17638889_- 0.999990382 1 0.999995191 6.79E-06 Pep FBtr0075198 17638116 17640026 3L - 17638861 17638958 3'utr Pep FlyBase G37679.1 AGGCGCTGAGGGTGAGCTGTACGATCCATCGGAAGCCACTGGCGATGACGAGGACGTGGAGATGGTGGATGATAATGCTGAGGGCGAGGGCGAAGGCG 19 17638884 0.930344867 6 18 68 0.954545455 1.322219295 0.409090909 0.157894737 0.272727273 19 1 0 21 3L:17638861-17638958 6 Pep FBtr0075198 17638116 17640026 TGATAA 6mer3-8 dme-miR-184-5p 3L - 17638865 17638925 3'utr Pep FlyBase G28463.1 AGCCACTGGCGATGACGAGGACGTGGAGATGGTGGATGATAATGCTGAGGGCGAGGGCGAA 8 17638883 0.881912087 6 8 22 1 1 0.1 0.25 0.4 8 0 0 10 3L:17638865-17638925 6 8 2257 FBgn0004401 3496.79 156.06 239.5966667 0.002287813 0.051262335 0.033389446 -5 -6 -5.5 0.1 dme-bantam-3p 7mer-m8 TGATCTC 3L 17639205 17639211 - 3L_17639205_17639211_- 0.661565032 0.654236175 0.657900604 0.005182244 Pep FBtr0075198 17638116 17640026 3L - 17639025 17639256 3'utr Pep FlyBase G37680.1 CCCGCCTACCTAAGTACAACTGGCAGCGTGCTGTCGGTCCCGGTCTGATCTCCAAGCTGGAGTGCTATGAGTGCTCGGTGTGCAGCAAGTTCTTCGACACCGAGGTGACCGCCGAGATTCACTCCCGTACGGCGACTCATCACCGCAACTTCTTGAAGTTTATCAACGAGAAATCAAGCGATACCAAGATCGCACAGAAGCGCGCAGCTGCCGCCCTGGAGGAGAATGAGCG 89 17639211 0.973825908 22 76 470 0.884615385 1.264817823 0.201923077 0.146067416 0.269230769 89 8 4 92 3L:17639025-17639256 7 Pep FBtr0075198 17638116 17640026 TGATCTC 7mer-m8 dme-bantam-3p 3L - 17639168 17639258 3'utr Pep FlyBase G28467.1 TACCCGCCTACCTAAGTACAACTGGCAGCGTGCTGTCGGTCCCGGTCTGATCTCCAAGCTGGAGTGCTATGAGTGCTCGGTGTGCAGCAAG 19 17639212 0.889050501 8 17 109 0.935483871 1.462397998 0.225806452 0.421052632 0.64516129 19 2 0 29 3L:17639168-17639258 7 20 2258 FBgn0004401 3496.79 156.06 239.5966667 0.005719531 0.128155837 0.083473615 0 1 0.5 0.1 dme-miR-34-5p 7mer-m8 CACTGCC 3L 17639322 17639328 - 3L_17639322_17639328_- 0.708679495 0.505708198 0.607193847 0.143522383 Pep FBtr0075198 17638116 17640026 3L - 17639268 17639399 3'utr Pep FlyBase G37681.1 GGGTGAGGAAGCTGCTGACGAGACAAAGGAGGGCGATGAGCTAAACGAGAGCCAAGAGGAAGAGGAAGTGGCACTGCCCGTGGACCCCGAGGACTGCATCCTTGACTTCAACGACGGCGATGAGATCCCCAG 32 17639331 0.895687552 10 32 71 1 1.612783857 0.43902439 0.28125 0.43902439 32 0 0 41 3L:17639268-17639399 7 Pep FBtr0075198 17638116 17640026 CACTGCC 7mer-m8 dme-miR-34-5p 3L - 17639260 17639334 3'utr Pep FlyBase G28468.1 AAGTGGCACTGCCCGTGGACCCCGAGGACTGCATCCTTGACTTCAACGACGGCGATGAGATCCCCAGCGAGGTGG 12 17639319 0.923067419 6 12 40 1 1.278753601 0.052631579 0.416666667 0.631578947 12 0 0 19 3L:17639260-17639334 7 9 2259 FBgn0004401 3496.79 156.06 239.5966667 0.002573789 0.057670127 0.037563127 3 -9 -3 0.1 dme-miR-282-5p 7mer-A1 GAGGCTA 3L 17639467 17639473 - 3L_17639467_17639473_- 0.821677197 0.821718204 0.8216977 2.90E-05 Pep FBtr0075198 17638116 17640026 3L - 17639449 17639500 3'utr Pep FlyBase G37682.2 AAGAAGGAGGGCGAAGCAGCCGATGGCGAGGCTAAGAAGGAGGGTGCCGGCG 41 17639477 0.977169677 2 33 41 0.909090909 1.602059991 0.568181818 0.073170732 0.136363636 41 4 0 40 3L:17639449-17639500 7 Pep FBtr0075198 17638116 17640026 GAGGCTA 7mer-A1 dme-miR-282-5p 3L - 17639419 17639499 3'utr Pep FlyBase G28469.1 AGAAGGAGGGCGAAGCAGCCGATGGCGAGGCTAAGAAGGAGGGTGCCGGCGATGGCGAGGGTGCCGAAGGTGATGAAGCCG 21 17639477 0.952206554 6 19 32 0.947368421 1.255272505 0.526315789 0.619047619 0.789473684 21 1 1 36 3L:17639419-17639499 7 23 2260 FBgn0004401 3496.79 156.06 239.5966667 0.006577461 0.147379213 0.095994658 4 4 4 0.1 dme-miR-12-5p 7mer-A1 ATACTCA 3L 17639646 17639652 - 3L_17639646_17639652_- 0.765483612 0.742860097 0.754171854 0.01599723 Pep FBtr0075198 17638116 17640026 3L - 17639585 17639902 3'utr Pep FlyBase G37683.1 CGCCTCAAGGCCAACATGATCCGTCAGGAGGCTAAGATCGCAGAGCAGCTCAAGTCGATCGAGTTTGACCGCTTGAAGCGCATGGGCAAAAGCAAGCAGCGTCAGCTGGACTACTGCACCATGTGCGACCTGAACTTCCATGGTCACATCTCGACCCATCGCAAGTCGGAGGGACATTTGCAGCTGAAGAAGTTCTTGCACCCCAAGTGCATTGAGTGCAACAAGGAGTTCGCCACTCGCATTGACTACGATACTCATCTGCTGTCCGCCGAGCATCTGAAGAAGGCTGCCGAGAACAACACCAAGGTGGGTGAGCGC 144 17639645 0.970719689 35 132 758 0.915151515 1.480006943 0.151515152 0.125 0.236363636 144 10 4 151 3L:17639585-17639902 7 Pep FBtr0075198 17638116 17640026 ATACTCA 7mer-A1 dme-miR-12-5p 3L - 17639585 17639675 3'utr Pep FlyBase G28470.1 GTTCGCCACTCGCATTGACTACGATACTCATCTGCTGTCCGCCGAGCATCTGAAGAAGGCTGCCGAGAACAACACCAAGGTGGGTGAGCGC 29 17639645 0.978988996 7 27 177 0.857142857 0.77815125 0.333333333 0.310344828 0.523809524 29 1 5 36 3L:17639585-17639675 7 39.5 2261 FBgn0004401 3496.79 156.06 239.5966667 0.011296074 0.253107779 0.16486039 -7 -7 -7 0.1 dme-miR-980-3p 6mer2-7 GCAGCT 3L 17639718 17639723 - 3L_17639718_17639723_- 0.999993603 0.999991138 0.99999237 1.77E-06 Pep FBtr0075198 17638116 17640026 3L - 17639585 17639902 3'utr Pep FlyBase G37683.1 CGCCTCAAGGCCAACATGATCCGTCAGGAGGCTAAGATCGCAGAGCAGCTCAAGTCGATCGAGTTTGACCGCTTGAAGCGCATGGGCAAAAGCAAGCAGCGTCAGCTGGACTACTGCACCATGTGCGACCTGAACTTCCATGGTCACATCTCGACCCATCGCAAGTCGGAGGGACATTTGCAGCTGAAGAAGTTCTTGCACCCCAAGTGCATTGAGTGCAACAAGGAGTTCGCCACTCGCATTGACTACGATACTCATCTGCTGTCCGCCGAGCATCTGAAGAAGGCTGCCGAGAACAACACCAAGGTGGGTGAGCGC 144 17639725 0.970719689 35 132 758 0.915151515 1.480006943 0.151515152 0.125 0.236363636 144 10 4 151 3L:17639585-17639902 6 Pep FBtr0075198 17638116 17640026 GCAGCT 6mer2-7 dme-miR-980-3p 3L - 17639680 17639809 3'utr Pep FlyBase G28471.1 AAGCAGCGTCAGCTGGACTACTGCACCATGTGCGACCTGAACTTCCATGGTCACATCTCGACCCATCGCAAGTCGGAGGGACATTTGCAGCTGAAGAAGTTCTTGCACCCCAAGTGCATTGAGTGCAACA 27 17639725 0.9583296 12 26 125 0.976744186 1.62324929 0.069767442 0.407407407 0.627906977 27 1 0 42 3L:17639680-17639809 6 23 2262 FBgn0004401 3496.79 156.06 239.5966667 0.006577461 0.147379213 0.095994658 2 2 2 0.1 dme-miR-33-5p 7mer-A1 AATGCAA 3L 17645569 17645575 - 3L_17645569_17645575_- 0.782037239 0.782508695 0.782272967 0.000333401 CG43085 FBtr0333122|FBtr0304976 17645484|17645484 17645613|17645613 3L - 17645551 17645591 3'utr CG43085 FlyBase G37696.1 TCAAGGCTCAAATGGGAATGCAAGACACAGCGGACTAATTT 44 17645573 0.997209469 2 43 78 1 1.681241237 0.166666667 0.068181818 0.145833333 44 0 0 48 3L:17645551-17645591 7 CG43085 FBtr0304976|FBtr0333122 17645484|17645484 17645613|17645613 AATGCAA 7mer-A1 dme-miR-33-5p 3L - 17645544 17645596 3'utr CG43085 FlyBase G28483.1 AGGACTCAAGGCTCAAATGGGAATGCAAGACACAGCGGACTAATTTTATTCCA 33 17645573 0.98216591 3 33 74 1 1.755874856 0.087719298 0.454545455 0.684210526 33 0 0 57 3L:17645544-17645596 7 37.5 2263 FBgn0262531 5.666666667 0.7 1.11 6.617647059 53.57142857 33.78378378 -2 -2 -2 0.1 dme-miR-8-3p 6mer2-7 AGTATT 3L 17648265 17648270 - 3L_17648265_17648270_- 0.999323033 0.815609406 0.907466219 0.129905132 Ndfip FBtr0075210 17647440 17648440 3L - 17648248 17648295 3'utr Ndfip FlyBase G37700.1 TTCTCGAAATCACTATGGACTTGAAAGTATTCCCTCAAATGTATTAGT 33 17648280 0.775661169 3 33 195 1 1.602059991 0.4 0.151515152 0.3 33 0 0 40 3L:17648248-17648295 6 Ndfip FBtr0075210 17647440 17648440 AGTATT 6mer2-7 dme-miR-8-3p 3L - 17648254 17648301 3'utr Ndfip FlyBase G28484.1 GCAGAGTTCTCGAAATCACTATGGACTTGAAAGTATTCCCTCAAATGT 29 17648280 0.753874219 3 29 146 1 1.633468456 0.465116279 0.344827586 0.558139535 29 0 0 43 3L:17648254-17648301 6 29 2264 FBgn0052177 332.66 19.31666667 29.61 0.087176096 1.501294219 0.979398852 10 10 10 0.1 dme-miR-305-3p 8mer-m1 ATGTGCCG 3L 17661159 17661166 - 3L_17661159_17661166_- 0.62873555 0.628735239 0.628735395 2.83E-07 Crtc FBtr0345384|FBtr0330162 17659816|17659816 17662225|17661949 3L - 17661134 17661191 3'utr Crtc FlyBase G37712.1 ACACCCAACCCATATTATAATCCCAATGTGCCGTGGAAGCAATTACTAGAGTTTAAGA 29 17661163 0.940467417 5 29 122 1 1.51851394 0 0.137931034 0.242424242 29 0 0 33 3L:17661134-17661191 8 Crtc FBtr0345384|FBtr0330162 17659816|17659816 17662225|17661949 ATGTGCCG 8mer-m1 dme-miR-305-3p 3L - 17661132 17661178 3'utr Crtc FlyBase G28492.1 ATTATAATCCCAATGTGCCGTGGAAGCAATTACTAGAGTTTAAGATG 21 17661163 0.775153561 4 20 94 0.933333333 1.447158031 0.166666667 0.333333333 0.533333333 21 2 0 28 3L:17661132-17661178 8 24 2265 FBgn0036746 1464.6 32.19333333 49.71333333 0.016386727 0.745495962 0.482767869 -3 -3 -3 0.1 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3L 1771981 1771986 - 3L_1771981_1771986_- 0.942740488 0.999999966 0.971370227 0.040488581 CG13933 FBtr0332881|FBtr0072792 1771807|1771807 1772601|1772601 3L - 1771957 1772042 3'utr CG13933 FlyBase G33475.1 GTTTCCAGTCCCTCATGCTGCGTAAGTTATAGTAGGACATAAACTTAAGGCTGTTTTTTGACAAACATTTCGGGTGTTTTAGAATT 33 1771997 0.987306031 6 32 274 0.972972973 1.556302501 0.108108108 0.121212121 0.216216216 33 1 0 36 3L:1771957-1772042 6 CG13933 FBtr0072792|FBtr0332881 1771807|1771807 1772601|1772601 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3L - 1771981 1772018 3'utr CG13933 FlyBase G25322.1 AGTTATAGTAGGACATAAACTTAAGGCTGTTTTTTGAC 20 1771997 0.755437791 4 19 165 0.882352941 1.477121255 0.117647059 0.45 0.676470588 20 4 0 30 3L:1771981-1772018 5 22 2266 FBgn0035270 373.6633333 14.21333333 21.71 0.058876529 1.547842402 1.0133579 11 11 11 0.1 dme-miR-965-3p 7mer-m8 TACGCTT 3L 1772300 1772306 - 3L_1772300_1772306_- 0.320284604 0.300282414 0.310283509 0.014143691 CG13933 FBtr0332881|FBtr0072792 1771807|1771807 1772601|1772601 3L - 1772278 1772343 3'utr CG13933 FlyBase G33477.1 AGATCGCTAAATTCTCTTAATTTAGGGCCAAAGGAGATACGCTTGATCTGAAGCTGTTGCGTATGA 51 1772286 0.795702591 9 48 323 0.919354839 1.153814864 0.483870968 0.117647059 0.274193548 51 2 3 57 3L:1772278-1772343 7 CG13933 FBtr0072792|FBtr0332881 1771807|1771807 1772601|1772601 TACGCTT 7mer-m8 dme-miR-965-3p 3L - 1772272 1772344 3'utr CG13933 FlyBase G25324.1 TAGATCGCTAAATTCTCTTAATTTAGGGCCAAAGGAGATACGCTTGATCTGAAGCTGTTGCGTATGAGATATG 27 1772286 0.93916862 8 27 174 1 1.681241237 0.375 0.444444444 0.6875 27 0 0 48 3L:1772272-1772344 7 35 2267 FBgn0035270 373.6633333 14.21333333 21.71 0.093667205 2.462476548 1.612160295 -20 -20 -20 0.1 dme-miR-304-5p 7mer-m8 TGAGATT 3L 17752172 17752178 - 3L_17752172_17752178_- 0.619728429 0.619859218 0.619793824 9.25E-05 Adgf-A FBtr0075191|FBtr0075190 17751729|17751729 17752452|17752452 3L - 17752143 17752238 3'utr Adgf-A FlyBase G37727.1 AGCTAATCGTTATGGACTAGTCCTTAGTTAGATCTAGGCTAATACCTCTCTGTAAACCCATGAGATTCTGTCCCACGCCCCTAAAACTGTTTCAAT 58 17752173 0.76055844 9 57 352 0.984375 1.799340549 0.09375 0.103448276 0.1875 58 1 0 63 3L:17752143-17752238 7 Adgf-A FBtr0075191|FBtr0075190 17751729|17751729 17752452|17752452 TGAGATT 7mer-m8 dme-miR-304-5p 3L - 17752148 17752239 3'utr Adgf-A FlyBase G28502.1 AAGCTAATCGTTATGGACTAGTCCTTAGTTAGATCTAGGCTAATACCTCTCTGTAAACCCATGAGATTCTGTCCCACGCCCCTAAAACTGTT 34 17752173 0.751486609 8 32 204 0.982142857 1.439332694 0.053571429 0.441176471 0.660714286 34 0 1 55 3L:17752148-17752239 7 33.5 2268 FBgn0036752 1210.026667 56.79666667 87.13666667 0.02768534 0.589823346 0.38445354 -5 -5 -5 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 3L 17797846 17797852 - 3L_17797846_17797852_- 0.620176438 0.620189155 0.620182797 9.05E-06 NUCB1 FBtr0075171 17797736 17798085 3L - 17797762 17797871 3'utr NUCB1 FlyBase G37734.1 TTCGCTTTTCCAGTAGCTCTGCATTTGCGTGATGTATTTCTCTAACGAATTTTGTGTACATATGAGTTTATACCTGAACATCAAAAACAAAATAAATGAAATGAAACGAA 85 17797846 0.989664956 15 81 792 0.949494949 1.496006599 0.212121212 0.152941176 0.272727273 85 3 2 94 3L:17797762-17797871 7 NUCB1 FBtr0075171 17797736 17798085 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 17797825 17797869 3'utr NUCB1 FlyBase G28508.2 CGCTTTTCCAGTAGCTCTGCATTTGCGTGATGTATTTCTCTAACG 58 17797847 0.780720965 6 56 568 0.967391304 1.949390007 0.173913043 0.396551724 0.619565217 58 3 0 89 3L:17797825-17797869 7 58.5 2269 FBgn0052190 2200.613333 121.53 186.3466667 0.026583498 0.481362627 0.313931025 -6 -5 -5.5 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3L 17798005 17798011 - 3L_17798005_17798011_- 0.4343646 0.435052379 0.43470849 0.000486348 NUCB1 FBtr0075171 17797736 17798085 3L - 17797955 17798058 3'utr NUCB1 FlyBase G37736.1 GGGGCATGCAAGCAAAGCATTATACACTTCTGGTAACGAGAACACAATGTGATTGGACTGAAATAGCTCACTAAAGTCAATATCTCACTATAGTTATGTAGCAA 598 17798006 0.96477575 15 591 3087 0.987412587 2.24674471 0.4 0.175585284 0.31048951 598 6 3 706 3L:17797955-17798058 7 NUCB1 FBtr0075171 17797736 17798085 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 17797978 17798060 3'utr NUCB1 FlyBase G28510.1 TTGGGGCATGCAAGCAAAGCATTATACACTTCTGGTAACGAGAACACAATGTGATTGGACTGAAATAGCTCACTAAAGTCAAT 447 17798006 0.737596664 9 431 2274 0.970546985 2.539076099 0.403927069 0.422818792 0.638148668 447 20 1 692 3L:17797978-17798060 7 509 2270 FBgn0052190 2200.613333 121.53 186.3466667 0.231299153 4.188266272 2.731468231 -5 -5 -5 0.1 dme-miR-7-5p 6mer2-7 TCTTCC 3L 17843964 17843969 - 3L_17843964_17843969_- 0.999471078 0.999225173 0.999348126 0.000173878 MED19 FBtr0075160|FBtr0345815 17843813|17843723 17844253|17844253 3L - 17843909 17844063 3'utr MED19 FlyBase G37748.1 AATTTTTCGTTCGTTTTCGCGCTAGCTTAATGAGATTTATTTAAACGCAAGTTATGGTACAAAACGCAAGAACGTTTTCGCTCTCGATTCCAGCTCTTCCCTCCACACAAACACACCCCTCGCCACGCCGCCACAAAAACGCTGCTTTGCAACCT 101 17843967 0.967422233 9 97 531 0.949152542 2.049218023 0.245762712 0.128712871 0.254237288 101 6 0 112 3L:17843909-17844063 6 MED19 FBtr0345815|FBtr0075160 17843723|17843813 17844253|17844253 TCTTCC 6mer2-7 dme-miR-7-5p 3L - 17843936 17844045 3'utr MED19 FlyBase G28522.1 GCGCTAGCTTAATGAGATTTATTTAAACGCAAGTTATGGTACAAAACGCAAGAACGTTTTCGCTCTCGATTCCAGCTCTTCCCTCCACACAAACACACCCCTCGCCACGC 84 17843967 0.710408113 6 81 395 0.975806452 2.08278537 0.266129032 0.357142857 0.564516129 84 3 0 121 3L:17843936-17844045 6 57 2271 FBgn0036761 540.3333333 35.77333333 55.01 0.105490438 1.593365635 1.036175241 -2 -2 -2 0.1 dme-miR-980-5p 6mer3-8 GAAAAA 3L 17849217 17849222 + 3L_17849217_17849222_+ 0.982448182 0.978825232 0.980636707 0.002561848 CG7430 FBtr0331810|FBtr0075140 17849144|17849144 17849372|17849601 3L + 17849195 17849248 3'utr CG7430 FlyBase G31171.1 AATCTTTGAATAACCCCTATTCGAAAAATTATCCTGACGGCCGAAACGACAGTC 10 17849223 0.967646001 5 10 57 1 1.079181246 0.5 0.1 0.25 10 0 0 12 3L:17849195-17849248 6 CG7430 FBtr0331810|FBtr0075140 17849144|17849144 17849372|17849601 GAAAAA 6mer3-8 dme-miR-980-5p 3L + 17849178 17849236 3'utr CG7430 FlyBase G23583.1 TTTTGCACCGCGTTTGAAATCTTTGAATAACCCCTATTCGAAAAATTATCCTGACGGCC 6 17849223 0.969770925 5 6 39 1 1 0.2 0.5 0.7 6 0 0 10 3L:17849178-17849236 6 6.5 2272 FBgn0036762 1043.3 65.57333333 100.5333333 0.006230231 0.099125661 0.064655172 -6 -6 -6 0.1 dme-miR-92b-3p 6mer2-7 TGCAAT 3L 17849326 17849331 + 3L_17849326_17849331_+ 0.999996753 1 0.999998377 2.26E-06 CG7430 FBtr0331810|FBtr0075140 17849144|17849144 17849372|17849601 3L + 17849309 17849360 3'utr CG7430 FlyBase G31172.1 TGGCGCCAGGCGTTAATTGCAATGTAATATGTGTATTAAGCTAGAATAAATA 6 17849325 0.97142634 4 6 39 1 1.041392685 0 0.5 0.727272727 6 0 0 11 3L:17849309-17849360 6 CG7430 FBtr0331810|FBtr0075140 17849144|17849144 17849372|17849601 TGCAAT 6mer2-7 dme-miR-92b-3p 3L + 17849301 17849360 3'utr CG7430 FlyBase G23584.1 AATGGTAATGGCGCCAGGCGTTAATTGCAATGTAATATGTGTATTAAGCTAGAATAAATA 6 17849309 0.979108581 5 6 39 1 1 0.1 0.333333333 0.6 6 0 0 10 3L:17849301-17849360 6 3.5 2273 FBgn0036762 1043.3 65.57333333 100.5333333 0.00335474 0.053375356 0.034814324 1 17 9 0.1 dme-miR-970-3p 7mer-m8 TCTTATG 3L 17882622 17882628 + 3L_17882622_17882628_+ 0.65894811 0.576067349 0.61750773 0.058605576 CG7408 FBtr0300281|FBtr0075142 17882612|17882612 17883653|17883653 3L + 17882607 17882654 stop_codon CG7408 FlyBase G31187.1 TAATTAAATGAAAATTCTTATGTAGGTTAAATATTTAATGATCTTGTT 17 17882621 0.849019879 2 17 176 1 1.278753601 0.052631579 0.117647059 0.210526316 17 0 0 19 3L:17882607-17882654 7 CG7408 FBtr0300281|FBtr0075142 17882612|17882612 17883653|17883653 TCTTATG 7mer-m8 dme-miR-970-3p 3L + 17882612 17882654 stop_codon CG7408 FlyBase G23597.1 AAATGAAAATTCTTATGTAGGTTAAATATTTAATGATCTTGTT 8 17882622 0.812022478 4 8 82 1 1 0 0.25 0.4 8 0 0 10 3L:17882612-17882654 7 11.5 2274 FBgn0036765 3.666666667 0.176666667 0.263333333 3.136363636 65.09433962 43.67088608 1 0 0.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 17899204 17899210 - 3L_17899204_17899210_- 0.777397284 0.731962031 0.754679658 0.032127609 Prestin FBtr0075153|FBtr0075153|FBtr0075153 17898887|17898887|17898887 17899268|17899268|17899268 3L - 17899086 17899341 stop_codon Prestin FlyBase G37766.1 CGAAGGACCTTTTGAGATCTTCCCCACCCTGCACGATTGTGTGGAATATGCCAATGCCTGTCGAACAGCGTGAGAGGGTGTTCCTGCTCCAGACACCCCAGTTAACTGGGGCAGAGAGCCAAACCACGTTTTGTGATATGTCCAAGTGATAGCTTGTGAATCGTAGCATCAAAACCCCTTCCTAGTTGCTAAAATCTATTTTAAACTGAATAGAAACAATGTCGCCGTCTACAATCAAGCAGAATAGGCTAAGTTT 99 17899212 0.982029089 25 88 655 0.905172414 1.419129308 0.129310345 0.131313131 0.25862069 99 8 3 105 3L:17899086-17899341 7 Prestin FBtr0075153|FBtr0075153|FBtr0075153 17898887|17898887|17898887 17899268|17899268|17899268 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 17899085 17899239 3'utr Prestin FlyBase G28536.1 TAACTGGGGCAGAGAGCCAAACCACGTTTTGTGATATGTCCAAGTGATAGCTTGTGAATCGTAGCATCAAAACCCCTTCCTAGTTGCTAAAATCTATTTTAAACTGAATAGAAACAATGTCGCCGTCTACAATCAAGCAGAATAGGCTAAGTTTG 79 17899211 0.983440977 12 71 556 0.92 1.458637849 0.288 0.430379747 0.64 79 7 3 115 3L:17899085-17899239 7 67.5 2275 FBgn0036770 2001.45 68.62666667 105.7333333 0.033725549 0.98358267 0.638398487 2 1 1.5 0.1 dme-miR-283-5p 7mer-m8 TGATATT 3L 17909484 17909490 + 3L_17909484_17909490_+ 0.348005691 0.581947419 0.464976555 0.165421762 CG14353 FBtr0075144 17909436 17909683 3L + 17909463 17909502 3'utr CG14353 FlyBase G31193.1 TAAAGAAATGCTTCATACTTGTGATATTGGATGATGGGTT 58 17909481 0.699701346 8 55 529 0.96 1.556302501 0.653333333 0.172413793 0.36 58 2 1 72 3L:17909463-17909502 7 CG14353 FBtr0075144 17909436 17909683 TGATATT 7mer-m8 dme-miR-283-5p 3L + 17909466 17909505 3'utr CG14353 FlyBase G23600.1 AGAAATGCTTCATACTTGTGATATTGGATGATGGGTTAAT 47 17909481 0.62775468 9 39 439 0.838235294 0.801632346 0.602941176 0.29787234 0.514705882 47 3 8 57 3L:17909466-17909505 7 52.5 2276 FBgn0036771 185.44 15.31 23.46333333 0.28311044 3.429131287 2.237533741 3 3 3 0.1 dme-bantam-3p 6mer2-7 GATCTC 3L 17952969 17952974 - 3L_17952969_17952974_- 0.999799802 0.999999995 0.999899898 0.000141563 Eip75B FBtr0306814|FBtr0075150|FBtr0075149 17950951|17952160|17952160 17953640|17953640|17953640 3L - 17952945 17953039 3'utr Eip75B FlyBase G37797.1 ATTATTATTATTAAATTTTTAAATACCTAAAAACAAAACAATGTGTGTGAAATTTTTTATTGTGCGATCTCCAAGCAGAATTGAAGTGCAGTTTG 128 17952997 0.983848228 16 117 912 0.923566879 1.684246748 0.025477707 0.203125 0.350318471 128 10 2 145 3L:17952945-17953039 6 Eip75B FBtr0075149|FBtr0075150|FBtr0306814 17952160|17952160|17950951 17953640|17953640|17953640 GATCTC 6mer2-7 dme-bantam-3p 3L - 17952935 17953017 3'utr Eip75B FlyBase G28557.1 ATACCTAAAAACAAAACAATGTGTGTGAAATTTTTTATTGTGCGATCTCCAAGCAGAATTGAAGTGCAGTTTGCAACAAATTT 92 17952998 0.980630713 15 86 611 0.957142857 2.127104798 0.035714286 0.369565217 0.585714286 92 6 0 134 3L:17952935-17953017 6 50.5 2277 FBgn0000568 1336.92 32.88666667 50.30333333 0.03777339 1.535576728 1.003909615 23 24 23.5 0.1 dme-miR-190-5p 6mer3-8 ACATAT 3L 17953133 17953138 - 3L_17953133_17953138_- 1 0.817233543 0.908616772 0.129235432 Eip75B FBtr0306814|FBtr0075150|FBtr0075149 17950951|17952160|17952160 17953640|17953640|17953640 3L - 17953076 17953288 3'utr Eip75B FlyBase G37798.1 AACAAACCCAAGGCAGCGCTCTGATTTCGCATTAACTTTTCTTCAGCTGCTACCGAAAACGCCCCTCACCTCCCCCCCACCCAACCCTTCCTCCACACACCAACCGTCTTTCGACCCCTGATTGTTTTATAAGTTTTAAGCTCTTGTTGTACATATTAATTACGTTTATTGGTAACTATGTTTAGCGCTTTAGTTGTAGTTGGAGCAAAACTA 72 17953144 0.985459224 28 70 577 0.965517241 1.447158031 0.034482759 0.180555556 0.32183908 72 1 2 84 3L:17953076-17953288 6 Eip75B FBtr0075149|FBtr0075150|FBtr0306814 17952160|17952160|17950951 17953640|17953640|17953640 ACATAT 6mer3-8 dme-miR-190-5p 3L - 17953077 17953266 3'utr Eip75B FlyBase G28558.1 GATTTCGCATTAACTTTTCTTCAGCTGCTACCGAAAACGCCCCTCACCTCCCCCCCACCCAACCCTTCCTCCACACACCAACCGTCTTTCGACCCCTGATTGTTTTATAAGTTTTAAGCTCTTGTTGTACATATTAATTACGTTTATTGGTAACTATGTTTAGCGCTTTAGTTGTAGTTGGAGCAAAACT 58 17953166 0.921890226 22 55 451 0.941176471 1.602059991 0.058823529 0.344827586 0.552941176 58 4 1 80 3L:17953077-17953266 6 9 2278 FBgn0000568 1336.92 32.88666667 50.30333333 0.006731891 0.27366714 0.178914585 6 28 17 0.1 dme-miR-92b-3p 7mer-m1 TGCAATT 3L 17953464 17953470 - 3L_17953464_17953470_- 0.765011703 0.765583326 0.765297514 0.000404182 Eip75B FBtr0306814|FBtr0306813|FBtr0075148|FBtr0075151|FBtr0075150|FBtr0347013|FBtr0075149 17950951|17953356|17953356|17953356|17952160|17953356|17952160 17953640|17953640|17953640|17953640|17953640|17953640|17953640 3L - 17953457 17953486 3'utr Eip75B FlyBase G37800.1 GCAAAACCAACATGCATGCAATTTAAAACT 10 17953473 0.894101181 2 8 33 0.833333333 1 0.166666667 0.2 0.333333333 10 2 0 10 3L:17953457-17953486 7 Eip75B FBtr0075149|FBtr0075150|FBtr0347013|FBtr0075148|FBtr0075151|FBtr0306814|FBtr0306813 17952160|17952160|17953356|17953356|17953356|17950951|17953356 17953640|17953640|17953640|17953640|17953640|17953640|17953640 TGCAATT 7mer-m1 dme-miR-92b-3p 3L - 17953446 17953510 3'utr Eip75B FlyBase G28560.1 TTGAGACGTGTACAAAGTTTGAAAGCAAAACCAACATGCATGCAATTTAAAACTAATATTTAAAG 10 17953474 0.928639991 5 9 55 0.916666667 1.041392685 0 0.2 0.333333333 10 1 0 11 3L:17953446-17953510 7 7 2279 FBgn0000568 1336.92 32.88666667 50.30333333 0.005235915 0.21285222 0.139155788 3 4 3.5 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 3L 1802052 1802057 + 3L_1802052_1802057_+ 0.981643599 0.978212804 0.979928201 0.002425942 Patj FBtr0301625|FBtr0072781|FBtr0072779 1801823|1801823|1801823 1802184|1802184|1802184 3L + 1802036 1802071 3'utr Patj FlyBase G27229.1 ATTATTAACGCCGAATTGTGTTTGTCCCCTGAAAAC 16 1802051 0.825775458 3 16 118 1 1.301029996 0.45 0.1875 0.35 16 0 0 20 3L:1802036-1802071 6 Patj FBtr0301625|FBtr0072781|FBtr0072779 1801823|1801823|1801823 1802184|1802184|1802184 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 1802030 1802069 3'utr Patj FlyBase G20610.1 ATGCATATTATTAACGCCGAATTGTGTTTGTCCCCTGAAA 8 1802051 0.83287874 4 8 65 1 1 0.7 0.25 0.4 8 0 0 10 3L:1802030-1802069 6 11.5 2280 FBgn0067864 663.1966667 24.43 37.27666667 0.017340256 0.470732706 0.308503979 1 1 1 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 1802151 1802158 + 3L_1802151_1802158_+ 0.500109262 0.500110352 0.500109807 7.78E-07 Patj FBtr0301625|FBtr0072781|FBtr0072779 1801823|1801823|1801823 1802184|1802184|1802184 3L + 1802126 1802175 3'utr Patj FlyBase G27230.1 TTAACATGGTATTTCCAGAGTGTATGTACTTAAACTAAATTAAATAATGT 111 1802150 0.7685985 3 110 878 1 2.103803721 0.023622047 0.117117117 0.228346457 111 0 0 127 3L:1802126-1802175 8 Patj FBtr0301625|FBtr0072781|FBtr0072779 1801823|1801823|1801823 1802184|1802184|1802184 GTACTTAA 8mer-A1 dme-miR-252-5p 3L + 1802125 1802185 3'utr Patj FlyBase G20611.1 TTTAACATGGTATTTCCAGAGTGTATGTACTTAAACTAAATTAAATAATGTACCTTCCGTA 82 1802150 0.752059427 5 79 628 0.967741935 2.079181246 0.008064516 0.365853659 0.580645161 82 4 0 120 3L:1802125-1802185 8 92.5 2281 FBgn0067864 663.1966667 24.43 37.27666667 0.139475972 3.786328285 2.481445051 1 1 1 0.1 dme-bantam-3p 8mer-A1 TGATCTCA 3L 18168772 18168779 - 3L_18168772_18168779_- 0.631136341 0.631135745 0.631136043 4.24E-07 hid FBtr0075133 18167743 18170010 3L - 18168761 18168804 3'utr hid FlyBase G37832.1 AAAAACCAATTCCCAAAAATCGCATTGATCTCATGGATTTATAC 30 18168780 0.742862364 5 30 214 1 1.579783597 0.026315789 0.233333333 0.394736842 30 0 0 38 3L:18168761-18168804 8 hid FBtr0075133 18167743 18170010 TGATCTCA 8mer-A1 dme-bantam-3p 3L - 18168761 18168796 3'utr hid FlyBase G28591.1 ATTCCCAAAAATCGCATTGATCTCATGGATTTATAC 20 18168780 0.776140948 2 20 136 1 1.51851394 0 0.3 0.575757576 20 0 0 33 3L:18168761-18168796 8 25 2282 FBgn0003997 37.33333333 1.456666667 2.223333333 0.669642857 17.1624714 11.24437781 1 1 1 0.1 dme-miR-2a-2-5p 6mer2-7 GATGAG 3L 18397603 18397608 - 3L_18397603_18397608_- 0.999602973 0.999012118 0.999307546 0.000417829 rpr FBtr0075120 18397533 18398037 3L - 18397576 18397621 3'utr rpr FlyBase G37837.1 AGAAAAAAACGAAGATGAGTCGAAGTTGGCTAAAAATTGCATCAAT 16 18397606 0.960397547 3 16 81 1 1.230448921 0.117647059 0.0625 0.117647059 16 0 0 17 3L:18397576-18397621 6 rpr FBtr0075120 18397533 18398037 GATGAG 6mer2-7 dme-miR-2a-2-5p 3L - 18397562 18397627 3'utr rpr FlyBase G28594.1 AACCCCAGAAAAAAACGAAGATGAGTCGAAGTTGGCTAAAAATTGCATCAATTTTTTGTCAAACAA 8 18397606 0.992888931 3 7 35 1 1.113943352 0.076923077 0.5 0.692307692 8 0 0 13 3L:18397562-18397627 6 10.5 2283 FBgn0011706 109.3166667 15.44666667 23.89666667 0.096051227 0.679758308 0.439391826 -2 -2 -2 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 18397836 18397842 - 3L_18397836_18397842_- 0.684660032 0.639568402 0.662114217 0.031884576 rpr FBtr0075120|FBtr0075120|FBtr0075120 18397533|18397533|18397533 18398037|18398037|18398037 3L - 18397793 18397941 3'utr rpr FlyBase G37840.1 ACAGTCACCACTCATCAGCCGACGGCACTCGATTTCTACTGCAGTCAAGGACACAGAGCCACAACACCCACCCAATTTTAGTTTACTCATCAAAGCGATTGTGATAATGGTTTTGTTTCTACAAAAAAGCGGAGGAAAAATTTGAAAAA 3183 18397843 0.973742105 27 3002 26899 0.9450883 1.742268886 0.061810155 0.121269243 0.228200883 3183 138 61 3425 3L:18397793-18397941 7 rpr FBtr0075120|FBtr0075120|FBtr0075120 18397533|18397533|18397533 18398037|18398037|18398037 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 18397795 18397940 3'utr rpr FlyBase G28597.1 CAGTCACCACTCATCAGCCGACGGCACTCGATTTCTACTGCAGTCAAGGACACAGAGCCACAACACCCACCCAATTTTAGTTTACTCATCAAAGCGATTGTGATAATGGTTTTGTTTCTACAAAAAAGCGGAGGAAAAATTTGAAA 2243 18397843 0.98718596 30 2117 18575 0.944877345 1.891829385 0.062626263 0.380294249 0.598845599 2243 150 41 3274 3L:18397795-18397940 7 2669.5 2284 FBgn0011706 109.3166667 15.44666667 23.89666667 24.41988108 172.8204575 111.7101409 1 1 1 0.1 dme-miR-986-5p 6mer3-8 ATTCGA 3L 1850999 1851004 - 3L_1850999_1851004_- 0.744053567 0.999932973 0.87199327 0.180934059 CNMa FBtr0332672|FBtr0303155 1850913|1850913 1851347|1851347 3L - 1850994 1851036 3'utr CNMa FlyBase G33541.1 AATATATAAATATTATCTATGATTCTTGTTGTATTCGAAATAC 16 1851020 0.714863515 6 15 178 0.952380952 1.301029996 0 0.3125 0.476190476 16 1 0 20 3L:1850994-1851036 6 CNMa FBtr0332672|FBtr0303155 1850913|1850913 1851347|1851347 ATTCGA 6mer3-8 dme-miR-986-5p 3L - 1850986 1851030 3'utr CNMa FlyBase G25364.1 TAAATATTATCTATGATTCTTGTTGTATTCGAAATACATTAAATT 11 1851021 0.993203851 5 10 126 0.941176471 1.204119983 0.058823529 0.545454545 0.705882353 11 1 0 16 3L:1850986-1851030 6 5.5 2285 FBgn0035282 2.666666667 0.21 0.333333333 2.0625 26.19047619 16.5 16 17 16.5 0.1 dme-miR-252-5p 7mer-m8 GTACTTA 3L 1851142 1851148 - 3L_1851142_1851148_- 0.588299916 0.588299917 0.588299916 0 CNMa FBtr0332672|FBtr0303155 1850913|1850913 1851347|1851347 3L - 1851041 1851159 3'utr CNMa FlyBase G33542.1 ACGATTACATTGTACTTATACATAATGTCTCGACTTACACACACTGACACACATCTGATACCCGCTCTCTGCACACCGACATTCACACACACGCACACACCGAAGTATTTCCATATTAG 28 1851149 0.872215485 9 26 176 0.939393939 1.491361694 0.333333333 0.178571429 0.303030303 28 2 0 31 3L:1851041-1851159 7 CNMa FBtr0332672|FBtr0303155 1850913|1850913 1851347|1851347 GTACTTA 7mer-m8 dme-miR-252-5p 3L - 1851082 1851157 3'utr CNMa FlyBase G25365.1 GATTACATTGTACTTATACATAATGTCTCGACTTACACACACTGACACACATCTGATACCCGCTCTCTGCACACCG 15 1851149 0.777190814 7 14 84 0.958333333 1.361727836 0.333333333 0.4 0.625 15 1 0 23 3L:1851082-1851157 7 7 2286 FBgn0035282 2.666666667 0.21 0.333333333 2.625 33.33333333 21 1 1 1 0.1 dme-miR-317-5p 7mer-A1 TATCCCA 3L 1858304 1858310 + 3L_1858304_1858310_+ 0.82334933 0.823349543 0.823349436 1.41E-07 CG12024 FBtr0072833|FBtr0303152|FBtr0072832 1858183|1858183|1858183 1859047|1859047|1859047 3L + 1858187 1858359 3'utr CG12024 FlyBase G27237.1 CGGATCGTTTTGTTATCTAATCTCAACGGCCATAACGTGACGATCACGTGCGCTAGTAATCTCCCCAGTTCCCCAGTCCAAAGTAATCTCCGGGCAAGAACGAAATCTGAAATCTCCTATCCCAATCTCGACACAAAGATGCGATGGTATTACCCTAGTTTTAACCTTAAGTG 74 1858293 0.840945916 19 68 381 0.925925926 1.875061263 0.135802469 0.094594595 0.172839506 74 6 0 75 3L:1858187-1858359 7 CG12024 FBtr0072832|FBtr0303152|FBtr0072833 1858183|1858183|1858183 1859047|1859047|1859047 TATCCCA 7mer-A1 dme-miR-317-5p 3L + 1858246 1858353 3'utr CG12024 FlyBase G20616.1 TCTCCCCAGTTCCCCAGTCCAAAGTAATCTCCGGGCAAGAACGAAATCTGAAATCTCCTATCCCAATCTCGACACAAAGATGCGATGGTATTACCCTAGTTTTAACCT 37 1858294 0.970700306 8 30 178 0.849056604 1.176091259 0.20754717 0.351351351 0.547169811 37 6 2 45 3L:1858246-1858353 7 23 2287 FBgn0035283 210.8633333 14.46 22.18 0.109075388 1.590594744 1.036970243 11 10 10.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3L 1858645 1858651 + 3L_1858645_1858651_+ 0.823224535 0.808923829 0.816074182 0.010112122 CG12024 FBtr0072833|FBtr0303152|FBtr0072832 1858183|1858183|1858183 1859047|1859047|1859047 3L + 1858622 1858696 3'utr CG12024 FlyBase G27240.2 TAGCACTTTGCTTAGCCCAAAACCTAGTCATGAAGCGGAACTCGAGCCACTTATTGTACAGTAATAGAAACTACC 23 1858652 0.938010944 9 21 95 0.931034483 1.431363764 0.379310345 0.173913043 0.344827586 23 2 0 27 3L:1858622-1858696 7 CG12024 FBtr0072832|FBtr0303152|FBtr0072833 1858183|1858183|1858183 1859047|1859047|1859047 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L + 1858596 1858678 3'utr CG12024 FlyBase G20619.1 AGGAATCGGAGGCGAGTCCCCCAGTATAGCACTTTGCTTAGCCCAAAACCTAGTCATGAAGCGGAACTCGAGCCACTTATTGT 25 1858652 0.951272565 9 24 105 0.972972973 1.556302501 0.27027027 0.36 0.567567568 25 1 0 36 3L:1858596-1858678 7 18 2288 FBgn0035283 210.8633333 14.46 22.18 0.085363348 1.244813278 0.81154193 -7 -7 -7 0.1 dme-miR-965-3p 6mer3-8 TACGCT 3L 1858900 1858905 + 3L_1858900_1858905_+ 0.996331619 1 0.998165809 0.002593951 CG12024 FBtr0072833|FBtr0303152|FBtr0072832 1858183|1858183|1858183 1859047|1859047|1859047 3L + 1858889 1858928 3'utr CG12024 FlyBase G27242.1 ATCGCAGATCTTACGCTGGATTAACATGCGTGCTATAAAC 8 1858915 0.796853823 4 7 48 0.9 0.954242509 0.1 0.25 0.4 8 1 0 9 3L:1858889-1858928 6 CG12024 FBtr0072832|FBtr0303152|FBtr0072833 1858183|1858183|1858183 1859047|1859047|1859047 TACGCT 6mer3-8 dme-miR-965-3p 3L + 1858882 1858921 3'utr CG12024 FlyBase G20620.1 CGATCCTATCGCAGATCTTACGCTGGATTAACATGCGTGC 5 1858912 0.972540504 4 4 27 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 3L:1858882-1858921 6 6 2289 FBgn0035283 210.8633333 14.46 22.18 0.028454449 0.414937759 0.270513977 -15 -12 -13.5 0.1 dme-bantam-3p 8mer-A1 TGATCTCA 3L 1859248 1859255 - 3L_1859248_1859255_- 0.631136377 0.631136357 0.631136367 0 R FBtr0332671|FBtr0303154|FBtr0072867 1859113|1859113|1859113 1860656|1860656|1860656 3L - 1859212 1859266 3'utr R FlyBase G33545.1 CACAGAGCCTCTGATCTCAGAATCCTGGCAGTCCCGAATTCGCGACGCAGTAGGT 76 1859256 0.708962651 6 70 276 0.867924528 1.361727836 0.08490566 0.263157895 0.471698113 76 11 3 92 3L:1859212-1859266 8 R FBtr0332671|FBtr0072867|FBtr0303154 1859113|1859113|1859113 1860656|1860656|1860656 TGATCTCA 8mer-A1 dme-bantam-3p 3L - 1859212 1859267 3'utr R FlyBase G25367.1 ACACAGAGCCTCTGATCTCAGAATCCTGGCAGTCCCGAATTCGCGACGCAGTAGGT 55 1859255 0.727588916 5 47 201 0.875 1.243038049 0.05 0.309090909 0.525 55 7 3 70 3L:1859212-1859267 8 47 2290 FBgn0004636 4610.196667 206.99 319.1866667 0.010194793 0.227064109 0.147249259 1 0 0.5 0.1 dme-miR-305-5p 7mer-m1 GTACAAT 3L 18668904 18668910 - 3L_18668904_18668910_- 0.765586663 0.756025087 0.760805875 0.006761072 Capr FBtr0345806|FBtr0075098 18668151|18668151 18669033|18669033 3L - 18668883 18668952 3'utr Capr FlyBase G37851.1 AAGGAAACCAATCATCAACATGCAAGTAATGGCCACGTAGACGTACAATTATTGTTACGCAAACCACTCT 18 18668923 0.953800518 8 17 81 0.947368421 1.255272505 0 0.055555556 0.105263158 18 1 0 18 3L:18668883-18668952 7 Capr FBtr0345806|FBtr0075098 18668151|18668151 18669033|18669033 GTACAAT 7mer-m1 dme-miR-305-5p 3L - 18668875 18668943 3'utr Capr FlyBase G28602.1 AATCATCAACATGCAAGTAATGGCCACGTAGACGTACAATTATTGTTACGCAAACCACTCTCAACCATA 12 18668923 0.956047127 5 11 48 1 1.204119983 0.0625 0.25 0.4375 12 0 0 16 3L:18668875-18668943 7 10 2291 FBgn0042134 2821.936667 86.24666667 132.2433333 0.003543666 0.11594651 0.075618179 13 13 13 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 3L 1867575 1867580 + 3L_1867575_1867580_+ 1 1 1 0 CG12025 FBtr0345381|FBtr0072834|FBtr0332668 1867491|1867491|1867491 1869491|1867863|1868644 3L + 1867491 1867609 stop_codon CG12025 FlyBase G27247.1 AAGCGTAAGCGGACATCTGGACAGTCGAGCTGGTTGATCCATGGACGAAGAGAGTGGGAGAAGCCCCATCTATAAATATAAATCTGTGTTTGTTTATACCCGACCCGTATAAACAACTT 34 1867573 0.989900228 8 29 283 0.88372093 1.579783597 0.186046512 0.205882353 0.372093023 34 5 0 38 3L:1867491-1867609 6 CG12025 FBtr0332668|FBtr0072834|FBtr0345381 1867491|1867491|1867491 1868644|1867863|1869491 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 1867562 1867590 3'utr CG12025 FlyBase G20624.1 ATAAATATAAATCTGTGTTTGTTTATACC 11 1867574 0.746220819 3 6 102 0.611111111 0.740362689 0 0.545454545 0.722222222 11 6 1 11 3L:1867562-1867590 6 15.5 2292 FBgn0035285 812.7766667 48.59666667 74.35333333 0.019070429 0.318951917 0.20846409 2 1 1.5 0.1 dme-miR-33-5p 7mer-A1 AATGCAA 3L 18683015 18683021 - 3L_18683015_18683021_- 0.640831092 0.716152427 0.67849176 0.053260202 Chmp1 FBtr0345383 18682893 18683218 3L - 18683003 18683083 3'utr Chmp1 FlyBase G37880.1 CTTTAAGTGTAAGTGTGCTGTTTGTATAGGCTTCAAACGGATTATGATTTACATGCTTTTCTAATGCAATATACGATAATC 11 18683035 0.776829692 7 11 99 1 1.041392685 0.090909091 0 0 11 0 0 11 3L:18683003-18683083 7 Chmp1 FBtr0345383 18682893 18683218 AATGCAA 7mer-A1 dme-miR-33-5p 3L - 18683008 18683083 3'utr Chmp1 FlyBase G28623.1 CTTTAAGTGTAAGTGTGCTGTTTGTATAGGCTTCAAACGGATTATGATTTACATGCTTTTCTAATGCAATATACGA 8 18683037 0.986234576 6 7 66 0.933333333 1.146128036 0.066666667 0.625 0.8 8 1 0 14 3L:18683008-18683083 7 2 2293 FBgn0036805 502.6666667 72.55666667 110.72 0.00397878 0.027564662 0.018063584 14 16 15 0.1 dme-miR-307a-3p 6mer3-8 GGTTGT 3L 1868455 1868460 + 3L_1868455_1868460_+ 0.999998268 0.999997367 0.999997817 6.36E-07 CG12025 FBtr0345381|FBtr0332668 1867491|1867491 1869491|1868644 3L + 1868421 1868471 3'utr CG12025 FlyBase G27251.1 GTATAATTTCATTTTAAGAATGAATGCTGAATATGGTTGTATTAAAACGAA 17 1868455 0.98784666 5 15 135 0.923076923 1.079181246 0.076923077 0.411764706 0.615384615 17 1 1 24 3L:1868421-1868471 6 CG12025 FBtr0332668|FBtr0345381 1867491|1867491 1868644|1869491 GGTTGT 6mer3-8 dme-miR-307a-3p 3L + 1868399 1868471 3'utr CG12025 FlyBase G20627.1 CAGCCGCTTAGTTGTTAATGTCGTATAATTTCATTTTAAGAATGAATGCTGAATATGGTTGTATTAAAACGAA 16 1868454 0.984657832 7 16 128 1 1.414973348 0.038461538 0.4375 0.653846154 16 0 0 26 3L:1868399-1868471 6 14 2294 FBgn0035285 812.7766667 48.59666667 74.35333333 0.017224904 0.288085603 0.188290146 0 1 0.5 0.1 dme-miR-317-3p 7mer-A1 GTGTTCA 3L 18752045 18752051 - 3L_18752045_18752051_- 0.823349562 0.823349562 0.823349562 0 ftz-f1 FBtr0304627|FBtr0347045|FBtr0075086|FBtr0075087 18750605|18750605|18751747|18751747 18752745|18752745|18752745|18752745 3L - 18752021 18752092 3'utr ftz-f1 FlyBase G37897.2 GGAAAATCCATACAAAGAAAATGAAAACAAAGCAAATTTAGGTGTTCATGGTATGAATGTATGTGTATATTA 21 18752044 0.982275511 7 19 157 0.956521739 1.342422681 0.130434783 0.095238095 0.173913043 21 1 0 22 3L:18752021-18752092 7 ftz-f1 FBtr0075086|FBtr0075087|FBtr0304627|FBtr0347045 18751747|18751747|18750605|18750605 18752745|18752745|18752745|18752745 GTGTTCA 7mer-A1 dme-miR-317-3p 3L - 18752034 18752067 3'utr ftz-f1 FlyBase G28634.1 AACAAAGCAAATTTAGGTGTTCATGGTATGAATG 11 18752055 0.847236164 3 11 79 1 1.176091259 0 0.272727273 0.466666667 11 0 0 15 3L:18752034-18752067 7 14 2295 FBgn0001078 1154.326667 23.85 36.73 0.012128283 0.587002096 0.381159815 -7 4 -1.5 0.1 dme-miR-2b-2-5p 7mer-m8 TTGAAGA 3L 18752169 18752175 - 3L_18752169_18752175_- 0.631525968 0.631525811 0.631525889 1.41E-07 ftz-f1 FBtr0304627|FBtr0347045|FBtr0075086|FBtr0075087 18750605|18750605|18751747|18751747 18752745|18752745|18752745|18752745 3L - 18752114 18752190 3'utr ftz-f1 FlyBase G37898.1 TAGTATCGTTCCCACTTGAAGATCGATTCTTGTATTTTTTTGCGCCAAGTGTCTTGCATAGTATTTGCGTCTAATCT 17 18752175 0.782322564 8 16 134 0.954545455 1.322219295 0.181818182 0.294117647 0.454545455 17 1 0 21 3L:18752114-18752190 7 ftz-f1 FBtr0075086|FBtr0075087|FBtr0304627|FBtr0347045 18751747|18751747|18750605|18750605 18752745|18752745|18752745|18752745 TTGAAGA 7mer-m8 dme-miR-2b-2-5p 3L - 18752155 18752189 3'utr ftz-f1 FlyBase G28635.1 AGTATCGTTCCCACTTGAAGATCGATTCTTGTATT 5 18752175 0.781863273 3 5 38 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3L:18752155-18752189 7 8.5 2296 FBgn0001078 1154.326667 23.85 36.73 0.0073636 0.35639413 0.231418459 0 0 0 0.1 dme-miR-184-5p 6mer3-8 TGATAA 3L 18752445 18752450 - 3L_18752445_18752450_- 0.996231182 0.999992213 0.998111698 0.002659429 ftz-f1 FBtr0304627|FBtr0347045|FBtr0075086|FBtr0075087 18750605|18750605|18751747|18751747 18752745|18752745|18752745|18752745 3L - 18752364 18752459 3'utr ftz-f1 FlyBase G37902.1 TGTAGTCCCTGATAAAGCAATTTTAAAACACTTGAACCTAAACGAGAATATGTAGTAGATGTATGGATTTAAATTTAAATACGGCAAGGAGAAACA 24 18752447 0.984226526 9 20 156 0.846153846 1.342422681 0.115384615 0.083333333 0.153846154 24 4 0 22 3L:18752364-18752459 6 ftz-f1 FBtr0075086|FBtr0075087|FBtr0304627|FBtr0347045 18751747|18751747|18750605|18750605 18752745|18752745|18752745|18752745 TGATAA 6mer3-8 dme-miR-184-5p 3L - 18752442 18752480 3'utr ftz-f1 FlyBase G28638.1 TAAATTAATTCGTGTTTTATTTGTAGTCCCTGATAAAGC 7 18752449 0.81846914 3 5 77 0.875 0.84509804 0.5 0.142857143 0.25 7 1 0 7 3L:18752442-18752480 6 6 2297 FBgn0001078 1154.326667 23.85 36.73 0.005197835 0.251572327 0.163354206 -3 -1 -2 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3L 18752510 18752515 - 3L_18752510_18752515_- 1 0.954300285 0.977150142 0.032314568 ftz-f1 FBtr0304627|FBtr0347045|FBtr0075086|FBtr0075087 18750605|18750605|18751747|18751747 18752745|18752745|18752745|18752745 3L - 18752487 18752591 3'utr ftz-f1 FlyBase G37903.1 CCAACTATCACACCTATACACACACATGCACACATTTGTTGATTCAATGTTAATTATTATTACGTTTACGGTTAGGTCTAGTTTACGTTTAACTAATTAATTAAT 17 18752542 0.992254524 12 15 167 0.9 1.255272505 0.1 0.117647059 0.25 17 2 0 18 3L:18752487-18752591 6 ftz-f1 FBtr0075086|FBtr0075087|FBtr0304627|FBtr0347045 18751747|18751747|18750605|18750605 18752745|18752745|18752745|18752745 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3L - 18752509 18752566 3'utr ftz-f1 FlyBase G28639.1 ATGCACACATTTGTTGATTCAATGTTAATTATTATTACGTTTACGGTTAGGTCTAGTT 14 18752542 0.990484396 9 14 149 1 1.431363764 0.111111111 0.571428571 0.777777778 14 0 0 27 3L:18752509-18752566 6 4.5 2298 FBgn0001078 1154.326667 23.85 36.73 0.003898377 0.188679245 0.122515655 27 27 27 0.1 "dme-miR-995-3p,dme-miR-998-3p" 7mer-A1 GGTGCTA 3L 18802504 18802510 - 3L_18802504_18802510_- 0.820111941 0.820253525 0.820182733 0.000100126 CG14073 FBtr0075084|FBtr0332801 18802263|18802263 18802781|18802781 3L - 18802486 18802522 3'utr CG14073 FlyBase G37922.1 AAGTGATACAAAGGTGCTATACACACTCAAAACGAAG 23 18802503 0.770038213 3 19 99 0.8 1 0.24 0.086956522 0.16 23 4 1 20 3L:18802486-18802522 7 CG14073 FBtr0332801|FBtr0075084 18802263|18802263 18802781|18802781 GGTGCTA 7mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 3L - 18802492 18802535 3'utr CG14073 FlyBase G28660.1 TAGAGCTAATGCAAAGTGATACAAAGGTGCTATACACACTCAAA 11 18802503 0.965074885 3 9 48 0.923076923 0.77815125 0.461538462 0.181818182 0.307692308 11 0 1 12 3L:18802492-18802535 7 16.5 2299 FBgn0036814 1280.663333 19.88666667 30.67333333 0.012883948 0.829701643 0.537926538 -7 -7 -7 0.1 dme-miR-184-5p 6mer3-8 TGATAA 3L 188028 188033 - 3L_188028_188033_- 1 0.999960355 0.999980177 2.80E-05 rno FBtr0305549|FBtr0305548|FBtr0072532 187205|187984|187205 188548|188548|188548 3L - 188016 188057 3'utr rno FlyBase G32807.1 CGCCTCCTACTCACTAAGCATGATTGATAAACCCCAGCATAT 11 188035 0.95299921 6 9 40 0.882352941 1.176091259 0.176470588 0.272727273 0.529411765 11 2 0 15 3L:188016-188057 6 rno FBtr0072532|FBtr0305549|FBtr0305548 187205|187205|187984 188548|188548|188548 TGATAA 6mer3-8 dme-miR-184-5p 3L - 188029 188118 3'utr rno FlyBase G24810.1 AAATCCAAAAATGCTCTCGGTTTAGGTTTATAAAGTTTCCATTCACCTAAAAATCCTTCCACGCCTCCTACTCACTAAGCATGATTGATA 11 188057 0.987698241 9 11 95 1 1.146128036 0.071428571 0.272727273 0.428571429 11 0 0 14 3L:188029-188118 4 5 2300 FBgn0035106 2909.993333 29.82333333 45.86333333 0.001718217 0.167653962 0.109019551 2 24 13 0.1 dme-miR-304-5p 6mer2-7 GAGATT 3L 18822126 18822131 + 3L_18822126_18822131_+ 0.999996324 0.99999895 0.999997637 1.91E-06 HipHop FBtr0075056|FBtr0075057 18821971|18821971 18822353|18822353 3L + 18822069 18822134 3'utr HipHop FlyBase G31237.1 TAAAGAAAGACAGAGATGTTAGCTTGGCAGGAGCCACAGAAAGATAGCCGCCATTTGGAGATTTCC 7 18822124 0.958206453 4 7 35 1 0.954242509 0.222222222 0.142857143 0.333333333 7 0 0 9 3L:18822069-18822134 6 HipHop FBtr0075056|FBtr0075057 18821971|18821971 18822353|18822353 GAGATT 6mer2-7 dme-miR-304-5p 3L + 18822076 18822134 3'utr HipHop FlyBase G23632.1 AGACAGAGATGTTAGCTTGGCAGGAGCCACAGAAAGATAGCCGCCATTTGGAGATTTCC 8 18822123 0.821962176 6 8 35 1 1.176091259 0.266666667 0.625 0.8 8 0 0 15 3L:18822076-18822134 6 4 2301 FBgn0036815 593.3433333 65.71333333 100.9466667 0.006741459 0.060870447 0.039624884 2 3 2.5 0.1 dme-miR-986-5p 6mer3-8 ATTCGA 3L 18827912 18827917 + 3L_18827912_18827917_+ 0.998102328 0.977154372 0.98762835 0.014812402 Cat FBtr0075058 18827897 18828188 3L + 18827897 18827956 stop_codon Cat FlyBase G31253.1 AAGCTGAGCGAGCGGATTCGACGGATCAGACTTGGTTTTTGGCCTTAATTACGATTAATC 18 18827934 0.987782192 7 16 139 0.909090909 1.301029996 0 0.222222222 0.363636364 18 2 0 20 3L:18827897-18827956 6 Cat FBtr0075058 18827897 18828188 ATTCGA 6mer3-8 dme-miR-986-5p 3L + 18827876 18827957 stop_codon Cat FlyBase G23639.1 TGGCCAAGTCCTCGAAGTTCTAAGCTGAGCGAGCGGATTCGACGGATCAGACTTGGTTTTTGGCCTTAATTACGATTAATCC 8 18827935 0.980026058 7 8 53 1 1.113943352 0.230769231 0.5 0.692307692 8 0 0 13 3L:18827876-18827957 6 7 2302 FBgn0000261 825.6266667 49.71666667 75.31333333 0.008478408 0.140797855 0.09294503 -22 -23 -22.5 0.1 dme-miR-14-3p 7mer-A1 AGACTGA 3L 18828832 18828838 - 3L_18828832_18828838_- 0.823349086 0.823349558 0.823349322 3.54E-07 Indy FBtr0075083|FBtr0075082|FBtr0301857|FBtr0075081 18828630|18828630|18828630|18828630 18829222|18829222|18829222|18829222 3L - 18828819 18828936 3'utr Indy FlyBase G37950.1 ACTTAATTGTTGCATTTAGCATAAAAATGGAAAAGATTTGGAAAAGTTAGAACAGTTTGTTCAATGGCAGCCCTGGCCTGCTAATATTTTAAATAACTAGACTGAGAGAACTTACATA 32 18828839 0.9035187 12 32 185 1 1.591064607 0.051282051 0.1875 0.333333333 32 0 0 39 3L:18828819-18828936 7 Indy FBtr0075083|FBtr0075082|FBtr0301857|FBtr0075081 18828630|18828630|18828630|18828630 18829222|18829222|18829222|18829222 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 18828796 18828892 3'utr Indy FlyBase G28680.1 AGTTAGAACAGTTTGTTCAATGGCAGCCCTGGCCTGCTAATATTTTAAATAACTAGACTGAGAGAACTTACATATTCATACATGTTTTTCAACTTGT 22 18828840 0.972444983 8 19 127 0.891891892 1.217483944 0.108108108 0.409090909 0.648648649 22 3 1 33 3L:18828796-18828892 7 17.5 2303 FBgn0036816 1686.326667 80.33666667 123.0166667 0.010377586 0.217833285 0.142257147 1 2 1.5 0.1 dme-miR-932-5p 6mer2-7 GAATTG 3L 18877959 18877964 + 3L_18877959_18877964_+ 0.999166167 0.999975882 0.999571025 0.000572544 Ugt FBtr0075064 18877778 18878245 3L + 18877936 18877972 3'utr Ugt FlyBase G31284.1 AAGAAAACAGCTCACTAAAGTCTGAATTGTGTTTTGT 16 18877950 0.834634529 5 16 101 1 1.301029996 0.35 0.25 0.4 16 0 0 20 3L:18877936-18877972 6 Ugt FBtr0075064 18877778 18878245 GAATTG 6mer2-7 dme-miR-932-5p 3L + 18877933 18877965 3'utr Ugt FlyBase G23659.1 AAAAAGAAAACAGCTCACTAAAGTCTGAATTGT 7 18877951 0.965115805 4 7 35 1 1 0.4 0.285714286 0.5 7 0 0 10 3L:18877933-18877965 6 11.5 2304 FBgn0014075 2195.993333 49.69 76.23666667 0.00523681 0.231434896 0.15084605 9 8 8.5 0.1 dme-miR-980-3p 6mer3-8 GGCAGC 3L 18878829 18878834 - 3L_18878829_18878834_- 0.999999666 0.999999603 0.999999634 7.07E-08 CG3961 FBtr0333712|FBtr0302322|FBtr0075078|FBtr0075077 18878248|18878651|18878248|18878248 18879086|18879086|18879086|18879086 3L - 18878775 18879064 3'utr CG3961 FlyBase G37968.1 AGACATCAACAACGAATCGAACTCAAGAAACTGGGAAGCATTCATTCAAATATGCCTATACCATTTTAAACTGATGATAACAAAGACTACAGATACAGATACGAAAGCGAACTGTCTAATTTTGTAGTATCGTCAATTCTTAGCACGTAAGAGGAGCGCAAGATACACCAGATACAGATACAATACACATAAAATATACACAACTTCAAACTGACAAGGAGAATCCTTTTGGCAGCCGCATTTTTTTATATAATTTAACCGAGAAGCGAACCTTAATTAATATATTAACT 233 18878835 0.966440359 39 217 1163 0.931899642 1.373580663 0.193548387 0.175965665 0.311827957 233 9 10 260 3L:18878775-18879064 6 CG3961 FBtr0075078|FBtr0075077|FBtr0333712|FBtr0302322 18878248|18878248|18878248|18878651 18879086|18879086|18879086|18879086 GGCAGC 6mer3-8 dme-miR-980-3p 3L - 18878821 18878874 3'utr CG3961 FlyBase G28697.1 AAAATATACACAACTTCAAACTGACAAGGAGAATCCTTTTGGCAGCCGCATTTT 54 18878836 0.712718692 8 51 259 0.941176471 1.204119983 0.258823529 0.425925926 0.635294118 54 1 4 80 3L:18878821-18878874 6 58.5 2305 FBgn0036821 610.73 21.53333333 32.27333333 0.095787009 2.716718266 1.812642016 1 2 1.5 0.1 dme-miR-1008-3p 7mer-A1 GCTGTGA 3L 18900769 18900775 - 3L_18900769_18900775_- 0.799889153 0.781136296 0.790512725 0.013260303 arx FBtr0075075 18900593 18900900 3L - 18900766 18900789 3'utr arx FlyBase G37998.1 TAAAATTAACATGTGCTGTGAAAC 8 18900778 0.723892102 2 7 43 0.833333333 1 0 0.375 0.583333333 8 2 0 10 3L:18900766-18900789 7 arx FBtr0075075 18900593 18900900 GCTGTGA 7mer-A1 dme-miR-1008-3p 3L - 18900764 18900788 3'utr arx FlyBase G28727.1 AAAATTAACATGTGCTGTGAAACAA 7 18900779 0.703538993 3 7 35 1 1.079181246 0 0.571428571 0.75 7 0 0 12 3L:18900764-18900788 7 7.5 2306 FBgn0036826 465.3333333 66.11666667 101.5966667 0.016117479 0.113435846 0.07382132 3 4 3.5 0.1 dme-miR-34-5p 8mer-A1 CACTGCCA 3L 18900869 18900876 - 3L_18900869_18900876_- 0.577444978 0.64123593 0.609340454 0.045106978 arx FBtr0075075 18900593 18900900 3L - 18900848 18900890 3'utr arx FlyBase G37999.1 TCAAGAATTACTCCCACTGCCAAAGAACAAAAACCAAAACATT 68 18900873 0.934896065 4 62 176 0.91025641 1.550228353 0.051282051 0.132352941 0.243589744 68 6 1 71 3L:18900848-18900890 8 arx FBtr0075075 18900593 18900900 CACTGCCA 8mer-A1 dme-miR-34-5p 3L - 18900849 18900888 3'utr arx FlyBase G28728.1 AAGAATTACTCCCACTGCCAAAGAACAAAAACCAAAACAT 73 18900873 0.915534299 4 73 175 1 2.021189299 0.057142857 0.356164384 0.552380952 73 0 0 105 3L:18900849-18900888 8 70.5 2307 FBgn0036826 465.3333333 66.11666667 101.5966667 0.151504298 1.06629695 0.693920404 -3 -3 -3 0.1 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 19003843 19003850 - 3L_19003843_19003850_- 0.643561121 0.643565421 0.643563271 3.04E-06 nkd FBtr0075039|FBtr0332649|FBtr0332650 19003739|19003739|19003739 19004922|19005670|19004922 3L - 19003826 19003886 3'utr nkd FlyBase G38038.1 AAAAACAAAATGCATTTAACTCTTATTTACATAAAAAAGACTGATTTCCAATTAAACAATA 12 19003842 0.972362984 7 12 66 1 1.204119983 0 0.25 0.4375 12 0 0 16 3L:19003826-19003886 8 nkd FBtr0332649|FBtr0332650|FBtr0075039 19003739|19003739|19003739 19005670|19004922|19004922 AAGACTGA 8mer-A1 dme-miR-14-3p 3L - 19003827 19003869 3'utr nkd FlyBase G28758.1 AACTCTTATTTACATAAAAAAGACTGATTTCCAATTAAACAAT 11 19003842 0.583894125 4 9 64 0.904761905 1.278753601 0.047619048 0.545454545 0.761904762 11 2 0 19 3L:19003827-19003869 8 9.5 2308 FBgn0002945 3.333333333 0.083333333 0.136666667 2.85 114 69.51219512 -8 -8 -8 0.1 dme-miR-14-3p 6mer2-7 AGACTG 3L 19059629 19059634 - 3L_19059629_19059634_- 0.998087912 0.998337139 0.998212525 0.000176211 CG3797 FBtr0332648 19059398 19060274 3L - 19059590 19059669 3'utr CG3797 FlyBase G38041.1 TAAAAAGACAAAGCTTGATAGAAACACAAGCGCTTAGACTGCAATTGTTCAGCTCAAAAAAGCAACTGAGTATTGATAAA 100 19059636 0.960150433 6 99 488 1 2.08278537 0.05785124 0.17 0.314049587 100 0 0 121 3L:19059590-19059669 6 CG3797 FBtr0332648 19059398 19060274 AGACTG 6mer2-7 dme-miR-14-3p 3L - 19059610 19059651 3'utr CG3797 FlyBase G28760.1 TAGAAACACAAGCGCTTAGACTGCAATTGTTCAGCTCAAAAA 51 19059636 0.953204497 2 49 226 0.957446809 1.477121255 0.085106383 0.568627451 0.765957447 51 2 2 90 3L:19059610-19059651 6 73.5 2309 FBgn0036842 550.5966667 23.31333333 35.34666667 0.133491546 3.152702316 2.079403998 2 2 2 0.1 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 19059690 19059697 - 3L_19059690_19059697_- 0.643564238 0.643565343 0.64356479 7.78E-07 CG3797 FBtr0332648 19059398 19060274 3L - 19059676 19059733 3'utr CG3797 FlyBase G38042.1 TTTACAGCTATTTCATTCAATTAATATTTCAATTCAAAGACTGACAACACCTTTCGTA 19 19059701 0.694787016 7 14 130 0.739130435 0.62838893 0 0.210526316 0.347826087 19 3 3 17 3L:19059676-19059733 8 CG3797 FBtr0332648 19059398 19060274 AAGACTGA 8mer-A1 dme-miR-14-3p 3L - 19059671 19059711 3'utr CG3797 FlyBase G28761.1 AATATTTCAATTCAAAGACTGACAACACCTTTCGTATGTTT 23 19059702 0.690026992 5 17 126 0.771428571 0.954242509 0 0.260869565 0.514285714 23 6 2 27 3L:19059671-19059711 8 19.5 2310 FBgn0036842 550.5966667 23.31333333 35.34666667 0.035416124 0.836431227 0.551678612 4 5 4.5 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3L 19059924 19059930 - 3L_19059924_19059930_- 0.521207901 0.52114221 0.521175055 4.65E-05 CG3797 FBtr0332648|FBtr0075037 19059398|19059770 19060274|19060274 3L - 19059887 19060009 3'utr CG3797 FlyBase G38044.1 CGCATCTATAATCCGTGTCACAAAATCGATCCACCATGCCTATATAAACCTATACATAAAAATATCGTCTAGTGTTAAGTGTGATTTTTTGTTAATACATGTGGTTTTATATTTCGATAAGTT 37 19059924 0.990410344 14 36 366 0.962264151 1.230448921 0.075471698 0.27027027 0.490566038 37 0 2 51 3L:19059887-19060009 7 CG3797 FBtr0332648|FBtr0075037 19059398|19059770 19060274|19060274 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 19059841 19059968 3'utr CG3797 FlyBase G28763.1 ATATAAACCTATACATAAAAATATCGTCTAGTGTTAAGTGTGATTTTTTGTTAATACATGTGGTTTTATATTTCGATAAGTTTTAAAATTTATAAATTGTATATATCTTGAATATTTGTATTGTGTGT 24 19059924 0.990618135 13 24 247 1 1.591064607 0.179487179 0.5 0.692307692 24 0 0 39 3L:19059841-19059968 7 18.5 2311 FBgn0036842 550.5966667 23.31333333 35.34666667 0.033599913 0.793537318 0.523387401 -6 -6 -6 0.1 dme-bantam-3p 6mer2-7 GATCTC 3L 19060076 19060081 - 3L_19060076_19060081_- 0.999245936 0.999999167 0.999622551 0.000532664 CG3797 FBtr0332648|FBtr0075037 19059398|19059770 19060274|19060274 3L - 19060066 19060091 3'utr CG3797 FlyBase G38046.1 GTTTCAACTAGATCTCTTAAAGATCC 8 19060075 0.754275183 3 8 57 1 1.079181246 0.583333333 0.375 0.583333333 8 0 0 12 3L:19060066-19060091 6 CG3797 FBtr0332648|FBtr0075037 19059398|19059770 19060274|19060274 GATCTC 6mer2-7 dme-bantam-3p 3L - 19060055 19060090 3'utr CG3797 FlyBase G28764.1 TTTCAACTAGATCTCTTAAAGATCCATTAAAGTTGC 6 19060075 0.980594347 4 6 50 1 0.77815125 0 0 0 6 0 0 6 3L:19060055-19060090 6 7 2312 FBgn0036842 550.5966667 23.31333333 35.34666667 0.012713481 0.300257363 0.198038476 -6 -6 -6 0.1 dme-miR-190-5p 6mer3-8 ACATAT 3L 19068591 19068596 - 3L_19068591_19068596_- 0.999999846 0.999672933 0.999836389 0.000231153 Mkp3 FBtr0075036|FBtr0333220|FBtr0075035|FBtr0330089 19067730|19066153|19068366|19067730 19068911|19068911|19068911|19068653 3L - 19068561 19068607 3'utr Mkp3 FlyBase G38058.1 AAACCACACATACATATGAGCCGCTTGTTAAATAGGGGTACGAATTC 21 19068591 0.759164796 6 20 119 1 1.380211242 0.125 0.095238095 0.208333333 21 0 0 24 3L:19068561-19068607 6 Mkp3 FBtr0075036|FBtr0333220|FBtr0075035|FBtr0330089 19067730|19066153|19068366|19067730 19068911|19068911|19068911|19068653 ACATAT 6mer3-8 dme-miR-190-5p 3L - 19068548 19068605 3'utr Mkp3 FlyBase G28771.1 ACCACACATACATATGAGCCGCTTGTTAAATAGGGGTACGAATTCAAACTTTAATAAA 18 19068591 0.973106554 4 18 110 1 1.491361694 0.032258065 0.5 0.709677419 18 0 0 31 3L:19068548-19068605 6 17.5 2313 FBgn0036844 2217.94 92.15 143.0633333 0.007890204 0.189907759 0.122323446 -5 -5 -5 0.1 dme-miR-1006-3p 6mer3-8 CGAATT 3L 19094676 19094681 + 3L_19094676_19094681_+ 0.999977076 0.999990572 0.999983824 9.55E-06 MESR6 FBtr0075026|FBtr0330090 19094563|19094563 19094760|19094760 3L + 19094620 19094701 3'utr MESR6 FlyBase G31317.1 TACAAAACTCGTTTGGGCGGGAAAACTCCACGACTAAAAGATACCCGTAGTGATTTCGAATTAGAACCTAATGATGGAAAAT 57 19094674 0.77105135 7 55 303 0.955882353 1.335792102 0.294117647 0.157894737 0.294117647 57 1 2 65 3L:19094620-19094701 6 MESR6 FBtr0330090|FBtr0075026 19094563|19094563 19094760|19094760 CGAATT 6mer3-8 dme-miR-1006-3p 3L + 19094594 19094703 3'utr MESR6 FlyBase G23682.1 CGCCACTGCGAATTAGATTCTGAATTTACAAAACTCGTTTGGGCGGGAAAACTCCACGACTAAAAGATACCCGTAGTGATTTCGAATTAGAACCTAATGATGGAAAATCC 34 19094674 0.97297931 10 32 187 0.93877551 1.662757832 0.326530612 0.352941176 0.551020408 34 3 0 46 3L:19094594-19094703 6 31.5 2314 FBgn0036846 174.09 12.22333333 18.78 0.180940893 2.577038451 1.677316294 2 2 2 0.1 dme-bantam-3p 6mer3-8 TGATCT 3L 19095299 19095304 - 3L_19095299_19095304_- 0.999969917 0.999970943 0.99997043 7.07E-07 CG11577 FBtr0075034 19094888 19095476 3L - 19095099 19095363 3'utr CG11577 FlyBase G38068.1 TAGTTTTTGAATGAACTCAAGCATTGACAAACTAAATGTAGTAGTTACTTAAATTCCAATGATCTTACTTTTTTTCGAAATGGAAATCATTTTAAGTTTTACCACCTATAGAACAAAGCGAAAAGTGTTTAATTAGCTTAAGTGAACTCACTATGTCTCTCAAGCTAATCTGTATAACTTCCACAACGACTGAGCCACAGAATGCTACTGAAAGTTTCGCCTGGGGCCATTGGCTTATTGATTTCGGCCACGAATTGGGGTCGAC 528 19095304 0.859162995 47 498 4850 0.951441578 1.952169501 0.059180577 0.181818182 0.344461305 528 26 6 627 3L:19095099-19095363 6 CG11577 FBtr0075034 19094888 19095476 TGATCT 6mer3-8 dme-bantam-3p 3L - 19095100 19095369 3'utr CG11577 FlyBase G28778.1 AAATTTTAGTTTTTGAATGAACTCAAGCATTGACAAACTAAATGTAGTAGTTACTTAAATTCCAATGATCTTACTTTTTTTCGAAATGGAAATCATTTTAAGTTTTACCACCTATAGAACAAAGCGAAAAGTGTTTAATTAGCTTAAGTGAACTCACTATGTCTCTCAAGCTAATCTGTATAACTTCCACAACGACTGAGCCACAGAATGCTACTGAAAGTTTCGCCTGGGGCCATTGGCTTATTGATTTCGGCCACGAATTGGGGTCGA 365 19095304 0.943204234 44 339 3358 0.931558935 2.088136089 0.034220532 0.320547945 0.52851711 365 33 3 490 3L:19095100-19095369 6 298 2315 FBgn0036847 488.3333333 44.84333333 68.4 0.610238908 6.645357913 4.356725146 0 0 0 0.1 dme-miR-999-3p 6mer2-7 GTTAAC 3L 19099421 19099426 - 3L_19099421_19099426_- 0.99994869 0.999981425 0.999965057 2.31E-05 Gem2 FBtr0330093|FBtr0075032 19099121|19099121 19099480|19099480 3L - 19099390 19099452 3'utr Gem2 FlyBase G38079.1 AATTTAAGCGCAAATTCGACTATTTTGTTAACTAAAAAGCCAAAAGCTACGCTGGTAATTTTG 14 19099427 0.980144609 8 13 96 0.941176471 0.903089987 0.058823529 0.214285714 0.352941176 14 0 1 16 3L:19099390-19099452 6 Gem2 FBtr0330093|FBtr0075032 19099121|19099121 19099480|19099480 GTTAAC 6mer2-7 dme-miR-999-3p 3L - 19099390 19099447 3'utr Gem2 FlyBase G28787.1 AAGCGCAAATTCGACTATTTTGTTAACTAAAAAGCCAAAAGCTACGCTGGTAATTTTG 14 19099427 0.689386233 8 14 96 1 1.301029996 0.1 0.428571429 0.6 14 0 0 20 3L:19099390-19099447 6 10 2316 FBgn0036850 154 17.00333333 26.24666667 0.064935065 0.588119976 0.381000762 1 1 1 0.1 dme-miR-283-5p 6mer3-8 TGATAT 3L 19257484 19257489 - 3L_19257484_19257489_- 0.999999879 0.999999986 0.999999933 7.07E-08 nes FBtr0075021|FBtr0075019 19257410|19257280 19258010|19258010 3L - 19257475 19257584 3'utr nes FlyBase G38091.1 ATTTCATTTATTGAAAGGGGAGCAGCGCTCAAGGAGACTAACTAAGCCATAAAGACAGTTTTATACCAATGTAAAGATGATGCGACGATATATTTTGATATGCTCACGCT 39 19257494 0.988591338 13 29 270 0.745098039 1.579783597 0.137254902 0.282051282 0.450980392 39 13 0 38 3L:19257475-19257584 6 nes FBtr0075021|FBtr0075019 19257410|19257280 19258010|19258010 TGATAT 6mer3-8 dme-miR-283-5p 3L - 19257475 19257613 3'utr nes FlyBase G28798.1 ACACCAGGGTCTTTGAAAATCAAACTCAAATTTCATTTATTGAAAGGGGAGCAGCGCTCAAGGAGACTAACTAAGCCATAAAGACAGTTTTATACCAATGTAAAGATGATGCGACGATATATTTTGATATGCTCACGCT 33 19257493 0.986122897 13 29 241 0.906976744 1.591064607 0.186046512 0.242424242 0.418604651 33 4 0 39 3L:19257475-19257613 6 21.5 2317 FBgn0026630 1182.346667 63.70333333 97.51666667 0.018184176 0.337501962 0.220475132 5 4 4.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3L 19257803 19257809 - 3L_19257803_19257809_- 0.823349562 0.823349562 0.823349562 0 nes FBtr0075021|FBtr0075019 19257410|19257280 19258010|19258010 3L - 19257609 19257837 3'utr nes FlyBase G38092.1 ACTTTGAACATATATATATATTGTCTGCCTAGTCAAGGTGGAGTCATCCCCTAGTATGCAGTGTGGATTTTGGCGATAAGATATTGTTTTATCTTGCCTAAGAACACATTCTCAGTCGTATATATATATATATATATAAACATTATGGAATTGTAAATTGTATAAGAGTATAAACCCGTTGAGTTCATCTAGGAACTAGACAGATCACTCGAGACTATAACGATACACC 58 19257814 0.906058157 26 52 435 0.910447761 1.785329835 0.074626866 0.120689655 0.23880597 58 6 0 61 3L:19257609-19257837 7 nes FBtr0075021|FBtr0075019 19257410|19257280 19258010|19258010 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L - 19257761 19257826 3'utr nes FlyBase G28800.1 ATATATATATTGTCTGCCTAGTCAAGGTGGAGTCATCCCCTAGTATGCAGTGTGGATTTTGGCGAT 14 19257813 0.979150593 6 13 94 1 1.278753601 0.315789474 0.214285714 0.421052632 14 0 0 19 3L:19257761-19257826 7 19.5 2318 FBgn0026630 1182.346667 63.70333333 97.51666667 0.016492625 0.306106431 0.199965818 5 4 4.5 0.1 dme-miR-1008-3p 6mer3-8 AGCTGT 3L 19262646 19262651 - 3L_19262646_19262651_- 0.999999802 1 0.999999901 1.41E-07 Max FBtr0345391|FBtr0075018 19262230|19262524 19262875|19262875 3L - 19262542 19262672 3'utr Max FlyBase G38104.1 CCGATAATCATAATCATCATTAGCTGTAAGCCCAAAATGTAACCCACCCAATCGACCTTAATTTGTATGCGTGCGTCTTTTCTACTTTCAACAAATTGTCACTCTGTGCGCAAAGAATAAAGTAAACTAGT 33 19262653 0.976903271 16 29 215 0.925 1.267171728 0.125 0.181818182 0.325 33 2 1 37 3L:19262542-19262672 6 Max FBtr0345391|FBtr0075018 19262230|19262524 19262875|19262875 AGCTGT 6mer3-8 dme-miR-1008-3p 3L - 19262613 19262672 3'utr Max FlyBase G28808.1 CCGATAATCATAATCATCATTAGCTGTAAGCCCAAAATGTAACCCACCCAATCGACCTTA 13 19262662 0.985424886 3 9 62 0.727272727 0.726998728 0.318181818 0.692307692 0.818181818 13 4 2 16 3L:19262613-19262672 6 12 2319 FBgn0017578 482.9933333 60.31 92.42333333 0.024845063 0.198971978 0.129837343 2 11 6.5 0.1 dme-miR-305-3p 6mer3-8 ATGTGC 3L 19266809 19266814 - 3L_19266809_19266814_- 0.999997898 0.999997889 0.999997893 0 CG9629 FBtr0075017 19266471 19266836 3L - 19266779 19266828 3'utr CG9629 FlyBase G38112.1 TACGATCAATTTTAATGTGCTACAATTTACAATACTATTACATATAATGT 14 19266813 0.785005521 2 13 125 0.941176471 1.204119983 0.058823529 0.214285714 0.352941176 14 1 0 16 3L:19266779-19266828 6 CG9629 FBtr0075017 19266471 19266836 ATGTGC 6mer3-8 dme-miR-305-3p 3L - 19266757 19266826 3'utr CG9629 FlyBase G28812.1 CGATCAATTTTAATGTGCTACAATTTACAATACTATTACATATAATGTCCAAAACTAAATGCAACTGATA 15 19266813 0.9873988 5 15 127 1 1.278753601 0.210526316 0.2 0.368421053 15 0 0 19 3L:19266757-19266826 6 11.5 2320 FBgn0036857 368.37 21.64666667 32.97666667 0.031218612 0.531259624 0.348731426 -1 -1 -1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3L 19282573 19282579 - 3L_19282573_19282579_- 0.823342997 0.823335056 0.823339027 5.59E-06 Gbs-76A FBtr0332155|FBtr0345390|FBtr0075014|FBtr0331425 19281926|19281362|19281926|19281926 19283222|19283222|19283222|19283222 3L - 19282542 19282595 3'utr Gbs-76A FlyBase G38123.1 AAGGTTCGAATGAATCCCAAAGATAGTTGTTAGTCGTATGTTATAAGAAGAGCA 43 19282581 0.952838037 10 33 345 0.755555556 1.230448921 0.355555556 0.046511628 0.088888889 43 10 1 34 3L:19282542-19282595 7 Gbs-76A FBtr0331425|FBtr0075014|FBtr0345390|FBtr0332155 19281926|19281926|19281362|19281926 19283222|19283222|19283222|19283222 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 19282525 19282599 3'utr Gbs-76A FlyBase G28818.1 CAGCAAGGTTCGAATGAATCCCAAAGATAGTTGTTAGTCGTATGTTATAAGAAGAGCAAGTGATAACAAACTAAA 23 19282581 0.98783679 5 21 186 0.80952381 1.531478917 0.30952381 0.565217391 0.761904762 23 8 0 34 3L:19282525-19282599 7 28 2321 FBgn0036862 172.6666667 4.483333333 6.786666667 0.162162162 6.24535316 4.125736739 2 2 2 0.1 dme-miR-14-3p 6mer3-8 AAGACT 3L 19450059 19450064 + 3L_19450059_19450064_+ 0.999999979 0.921369857 0.960684918 0.055599877 Chd3 FBtr0074998 19449926 19450238 3L + 19450038 19450069 3'utr Chd3 FlyBase G31352.1 AATATATAGTTATTTTGCTCCAAGACTTCACT 5 19450053 0.982416941 4 4 41 0.888888889 0.903089987 0 0.4 0.666666667 5 1 0 8 3L:19450038-19450069 6 Chd3 FBtr0074998 19449926 19450238 AAGACT 6mer3-8 dme-miR-14-3p 3L + 19450038 19450070 3'utr Chd3 FlyBase G23707.1 AATATATAGTTATTTTGCTCCAAGACTTCACTA 7 19450052 0.649954712 3 7 55 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 3L:19450038-19450070 6 6 2322 FBgn0023395 212.48 8.483333333 13.1 0.028237952 0.707269155 0.458015267 6 7 6.5 0.1 dme-miR-318-3p 6mer3-8 CCCAGT 3L 19450132 19450137 + 3L_19450132_19450137_+ 0.998613612 0.99946909 0.999041351 0.00060493 Chd3 FBtr0074998 19449926 19450238 3L + 19450096 19450148 3'utr Chd3 FlyBase G31353.1 ACTATTACTTTTTTGTTCGACTGTAACAATTTTTCGCCCAGTAAATATTCTAT 14 19450128 0.751318797 5 14 132 1 1.255272505 0 0.142857143 0.333333333 14 0 0 18 3L:19450096-19450148 6 Chd3 FBtr0074998 19449926 19450238 CCCAGT 6mer3-8 dme-miR-318-3p 3L + 19450084 19450144 3'utr Chd3 FlyBase G23708.1 AGTAATAGCAGTACTATTACTTTTTTGTTCGACTGTAACAATTTTTCGCCCAGTAAATATT 14 19450128 0.987237627 5 12 110 0.95 1.278753601 0.05 0.285714286 0.5 14 1 0 19 3L:19450084-19450144 6 9.5 2323 FBgn0023395 212.48 8.483333333 13.1 0.04471009 1.119842829 0.72519084 4 4 4 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 1950373 1950378 - 3L_1950373_1950378_- 0.998117721 0.998254744 0.998186232 9.69E-05 mv FBtr0304060 1950304 1950578 3L - 1950355 1950426 3'utr mv FlyBase G33597.1 AAGATTCCTAGGCTTAGGTCTCATAGAGCTGTAAAATACACCTTTTGTACCAAAACTTTATATTATTATTAC 12 1950381 0.982084297 4 12 95 1 1.113943352 0 0.083333333 0.153846154 12 0 0 13 3L:1950355-1950426 6 mv FBtr0304060 1950304 1950578 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 1950357 1950423 3'utr mv FlyBase G25406.1 ATTCCTAGGCTTAGGTCTCATAGAGCTGTAAAATACACCTTTTGTACCAAAACTTTATATTATTATT 9 1950381 0.965160699 5 9 67 1 1.113943352 0.076923077 0.444444444 0.615384615 9 0 0 13 3L:1950357-1950423 6 7 2324 FBgn0265988 597.23 6.253333333 9.486666667 0.011720778 1.119402985 0.737877723 3 3 3 0.1 dme-miR-283-5p 8mer-m1 TGATATTT 3L 19585131 19585138 - 3L_19585131_19585138_- 0.555592863 0.5555868 0.555589831 4.31E-06 CG9231 FBtr0074972|FBtr0344994 19585091|19585091 19585473|19585473 3L - 19585103 19585150 3'utr CG9231 FlyBase G38172.1 ATAGATATTCAGTGATATTTGTAATGTTGTATTATCAAAAATAAAACA 17 19585143 0.98674877 8 14 145 0.85 0.753327667 0.05 0.176470588 0.3 17 1 2 17 3L:19585103-19585150 8 CG9231 FBtr0074972|FBtr0344994 19585091|19585091 19585473|19585473 TGATATTT 8mer-m1 dme-miR-283-5p 3L - 19585118 19585150 3'utr CG9231 FlyBase G28850.1 ATAGATATTCAGTGATATTTGTAATGTTGTATT 7 19585143 0.957875442 3 7 63 1 1.079181246 0 0.428571429 0.666666667 7 0 0 12 3L:19585118-19585150 8 10.5 2325 FBgn0036887 129 20.06333333 30.59 0.081395349 0.523342748 0.343249428 5 5 5 0.1 dme-miR-277-3p 6mer3-8 TGCATT 3L 19590925 19590930 - 3L_19590925_19590930_- 0.999986191 0.99997485 0.99998052 7.99E-06 ash1 FBtr0306010|FBtr0306009 19590771|19590771 19591301|19591301 3L - 19590912 19590976 3'utr ash1 FlyBase G38179.1 CAAAACTATCCCCCTCTCGTCTTTGCAATTGAAGGCGTTTGACTTTTGCATTGTTATTTTAAATT 46 19590931 0.776344362 12 45 362 0.984615385 1.505149978 0.061538462 0.326086957 0.523076923 46 0 1 64 3L:19590912-19590976 6 ash1 FBtr0306010|FBtr0306009 19590771|19590771 19591301|19591301 TGCATT 6mer3-8 dme-miR-277-3p 3L - 19590911 19590975 3'utr ash1 FlyBase G28856.1 AAAACTATCCCCCTCTCGTCTTTGCAATTGAAGGCGTTTGACTTTTGCATTGTTATTTTAAATTA 35 19590931 0.738578334 7 35 283 1 1.698970004 0.08 0.285714286 0.5 35 0 0 50 3L:19590911-19590975 6 35.5 2326 FBgn0005386 720.8833333 11.4 17.44333333 0.049245139 3.114035088 2.035161475 1 1 1 0.1 dme-miR-282-5p 6mer3-8 AGAGGC 3L 19591250 19591255 - 3L_19591250_19591255_- 1 0.999999994 0.999999997 0 ash1 FBtr0306010|FBtr0306009 19590771|19590771 19591301|19591301 3L - 19591219 19591308 stop_codon ash1 FlyBase G38181.1 AACATAACCGATGTAACGCGAGTAGATTAAGCCGTGTATATACGCCTAAAGTTAGAGGCATTGATTAATATTTATGGAACTTCAATTAAC 24 19591256 0.976446475 8 24 156 1 1.447158031 0.142857143 0.166666667 0.285714286 24 0 0 28 3L:19591219-19591308 6 ash1 FBtr0306010|FBtr0306009 19590771|19590771 19591301|19591301 AGAGGC 6mer3-8 dme-miR-282-5p 3L - 19591243 19591275 3'utr ash1 FlyBase G28858.1 GTGTATATACGCCTAAAGTTAGAGGCATTGATT 12 19591256 0.78400722 5 11 82 0.909090909 1.301029996 0.181818182 0.416666667 0.681818182 12 2 0 20 3L:19591243-19591275 6 15 2327 FBgn0005386 720.8833333 11.4 17.44333333 0.020807805 1.315789474 0.859927384 1 1 1 0.1 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3L 19613357 19613364 + 3L_19613357_19613364_+ 0.631060284 0.631077191 0.631068738 1.20E-05 CG9376 FBtr0074946 19613260 19613489 3L + 19613339 19613424 3'utr CG9376 FlyBase G31405.1 AACCACGTCATCATCCCGTCTAGTCAGCAGCTTAGGAACTACCAAAAAGCAATTACCACTTTAATGTTACATGTTTAATCATATTA 85 19613352 0.971182698 12 82 478 0.961538462 1.698970004 0.259615385 0.176470588 0.326923077 85 3 1 100 3L:19613339-19613424 8 CG9376 FBtr0074946 19613260 19613489 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L + 19613337 19613390 3'utr CG9376 FlyBase G23745.1 AGAACCACGTCATCATCCCGTCTAGTCAGCAGCTTAGGAACTACCAAAAAGCAA 51 19613352 0.939950201 8 46 277 0.902439024 1.568201724 0.182926829 0.450980392 0.658536585 51 7 1 74 3L:19613337-19613390 8 63 2328 FBgn0036893 103 12.34333333 18.84333333 0.611650485 5.103969754 3.343357509 5 5 5 0.1 dme-miR-79-3p 6mer3-8 TAGCTT 3L 19624535 19624540 - 3L_19624535_19624540_- 1 1 1 0 wnd FBtr0074965|FBtr0074963|FBtr0074964 19624404|19624404|19624404 19625547|19625547|19625547 3L - 19624472 19624554 3'utr wnd FlyBase G38236.1 ACTAGTTGGATGTTTAGCTTCGTAAGATGTGTCGTTCCTTTGTGGGCGACGTTTCTCTACATTATGTAAATGTACTTCATATT 10 19624541 0.987436245 7 10 88 1 1.113943352 0.076923077 0.2 0.384615385 10 0 0 13 3L:19624472-19624554 6 wnd FBtr0074964|FBtr0074965|FBtr0074963 19624404|19624404|19624404 19625547|19625547|19625547 TAGCTT 6mer3-8 dme-miR-79-3p 3L - 19624494 19624555 3'utr wnd FlyBase G28897.1 CACTAGTTGGATGTTTAGCTTCGTAAGATGTGTCGTTCCTTTGTGGGCGACGTTTCTCTACA 6 19624540 0.984860413 5 6 46 1 0.954242509 0.444444444 0.5 0.666666667 6 0 0 9 3L:19624494-19624555 6 5 2329 FBgn0036896 311 9.553333333 14.51666667 0.01607717 0.52337753 0.344431688 1 0 0.5 0.1 dme-miR-1006-3p 6mer3-8 CGAATT 3L 19624624 19624629 - 3L_19624624_19624629_- 0.998285951 0.811620949 0.90495345 0.131992158 wnd FBtr0074965|FBtr0074963|FBtr0074964 19624404|19624404|19624404 19625547|19625547|19625547 3L - 19624626 19624671 3'utr wnd FlyBase G38237.1 AAATACGTTTCGCCCCTCTGGAAATCGTTCATCTGCTGCACACGAA 18 19624638 0.868260516 6 17 132 0.95 1.278753601 0.05 0.111111111 0.2 18 1 0 19 3L:19624626-19624671 3 wnd FBtr0074964|FBtr0074965|FBtr0074963 19624404|19624404|19624404 19625547|19625547|19625547 CGAATT 6mer3-8 dme-miR-1006-3p 3L - 19624581 19624667 3'utr wnd FlyBase G28898.1 ACGTTTCGCCCCTCTGGAAATCGTTCATCTGCTGCACACGAATTACAAATTTAATATTATTCTATATACACTCAATATATATATATA 17 19624638 0.980229686 9 17 125 1 1.397940009 0.04 0.352941176 0.56 17 0 0 25 3L:19624581-19624667 6 3.5 2330 FBgn0036896 311 9.553333333 14.51666667 0.011254019 0.366364271 0.241102181 9 9 9 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 3L 19625252 19625258 - 3L_19625252_19625258_- 0.620204202 0.620204266 0.620204234 7.07E-08 wnd FBtr0074965|FBtr0074963|FBtr0074964 19624404|19624404|19624404 19625547|19625547|19625547 3L - 19625231 19625312 3'utr wnd FlyBase G38241.1 AAACCCTTTTGGGTTCTTTGGGGCGATCTTTGTCCGTGTCGTACTCGTATCGCATGCATTTCCTATTTTGCTAAATATAATT 23 19625258 0.989371264 11 23 235 1 1.397940009 0.2 0.086956522 0.16 23 0 0 25 3L:19625231-19625312 7 wnd FBtr0074964|FBtr0074965|FBtr0074963 19624404|19624404|19624404 19625547|19625547|19625547 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 19625236 19625312 3'utr wnd FlyBase G28901.1 AAACCCTTTTGGGTTCTTTGGGGCGATCTTTGTCCGTGTCGTACTCGTATCGCATGCATTTCCTATTTTGCTAAATA 15 19625258 0.900700155 9 15 156 1 1.431363764 0.185185185 0.533333333 0.740740741 15 0 0 27 3L:19625236-19625312 7 15 2331 FBgn0036896 311 9.553333333 14.51666667 0.048231511 1.570132589 1.033295063 0 0 0 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 19638706 19638711 - 3L_19638706_19638711_- 0.999990518 0.999999737 0.999995127 6.51E-06 CG8786 FBtr0331862|FBtr0331862|FBtr0331862 19637205|19637205|19637205 19639572|19639572|19639572 3L - 19638688 19638774 5'utr CG8786 FlyBase G38261.1 CAGGGGAATCAGATGCAGTATTAATTATTAAGTCGCCGTGAAGTGCGTTAAACAAAAACATTTCTGTGACAGTTGAATATATTGATA 132 19638713 0.903648385 11 127 860 0.963414634 2.198657087 0.109756098 0.181818182 0.341463415 132 6 0 158 3L:19638688-19638774 6 CG8786 FBtr0331862|FBtr0331862|FBtr0331862 19637205|19637205|19637205 19639572|19639572|19639572 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 19638668 19638773 5'utr CG8786 FlyBase G28916.1 AGGGGAATCAGATGCAGTATTAATTATTAAGTCGCCGTGAAGTGCGTTAAACAAAAACATTTCTGTGACAGTTGAATATATTGATATTTTGTATACTCTAAGTTGC 73 19638713 0.922138269 11 70 511 0.95412844 2.017033339 0.110091743 0.328767123 0.550458716 73 5 0 104 3L:19638668-19638773 6 80 2332 FBgn0036897 334.61 15.00666667 22.97333333 0.239084307 5.330964016 3.482298317 2 2 2 0.1 dme-miR-999-3p 7mer-m8 AGTTAAC 3L 19639042 19639048 - 3L_19639042_19639048_- 0.664634856 0.648496652 0.656565754 0.011411431 CG8786 FBtr0331862 19637205 19639572 3L - 19639006 19639054 5'utr CG8786 FlyBase G38263.1 TCGGAAAGTTAACCCTCCCTATGGTCTCATTTGCAAGCTGGCAAAAGTA 464 19639033 0.668438147 6 451 3526 0.977346278 2.178976947 0.03236246 0.232758621 0.42394822 464 11 3 604 3L:19639006-19639054 7 CG8786 FBtr0331862 19637205 19639572 AGTTAAC 7mer-m8 dme-miR-999-3p 3L - 19639008 19639060 5'utr CG8786 FlyBase G28917.1 AAGAATTCGGAAAGTTAACCCTCCCTATGGTCTCATTTGCAAGCTGGCAAAAG 399 19639033 0.674755625 7 390 3047 0.969105691 1.997095009 0.058536585 0.388471178 0.603252033 399 14 5 596 3L:19639008-19639060 7 394.5 2333 FBgn0036897 334.61 15.00666667 22.97333333 1.178984489 26.2883163 17.17208358 -15 -15 -15 0.1 dme-miR-184-5p 6mer3-8 TGATAA 3L 1966728 1966733 + 3L_1966728_1966733_+ 0.99746199 0.980525866 0.988993928 0.011975631 SCOT FBtr0333431|FBtr0072843|FBtr0072844 1966678|1966678|1966678 1966805|1966805|1966805 3L + 1966706 1966777 3'utr SCOT FlyBase G27267.1 AGCTGCAATACCTCCGGTTGAGTGATAAACGAGTGCATTTATTTTTTGTTGACCGTGTGACAAAAACATTTG 16 1966723 0.981446333 6 15 113 0.941176471 1.204119983 0.058823529 0.0625 0.117647059 16 1 0 16 3L:1966706-1966777 6 SCOT FBtr0333431|FBtr0072843|FBtr0072844 1966678|1966678|1966678 1966805|1966805|1966805 TGATAA 6mer3-8 dme-miR-184-5p 3L + 1966712 1966750 3'utr SCOT FlyBase G20638.1 AATACCTCCGGTTGAGTGATAAACGAGTGCATTTATTTT 15 1966723 0.73565906 7 14 109 0.947368421 1.255272505 0.105263158 0.2 0.368421053 15 1 0 18 3L:1966712-1966750 6 14 2334 FBgn0035298 434.02 28.30666667 43.56 0.032256578 0.494583137 0.321395776 5 5 5 0.1 dme-miR-304-5p 7mer-m8 TGAGATT 3L 19714622 19714628 - 3L_19714622_19714628_- 0.620203442 0.620203441 0.620203442 0 Trpml FBtr0074952 19714416 19715268 3L - 19714583 19714648 3'utr Trpml FlyBase G38288.1 AACTGCACTGGTCGACAAAATGAGATTTTTGGCAGTCTAAGCAAATAGTTATTTTAGAAAGTGTTT 8 19714628 0.983870499 4 6 54 0.9 0.954242509 0.1 0.25 0.4 8 1 0 9 3L:19714583-19714648 7 Trpml FBtr0074952 19714416 19715268 TGAGATT 7mer-m8 dme-miR-304-5p 3L - 19714603 19714645 3'utr Trpml FlyBase G28933.1 TGCACTGGTCGACAAAATGAGATTTTTGGCAGTCTAAGCAAAT 5 19714628 0.982196204 3 4 33 0.857142857 0.77815125 0.142857143 0.4 0.571428571 5 1 0 6 3L:19714603-19714645 7 5.5 2335 FBgn0262516 372.8066667 14.61333333 22.29666667 0.014752955 0.376368613 0.246673643 0 0 0 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 19715117 19715122 - 3L_19715117_19715122_- 0.985595016 0.924697033 0.955146024 0.043061389 Trpml FBtr0074952 19714416 19715268 3L - 19715090 19715146 3'utr Trpml FlyBase G38290.1 GAGATAAGAGAAACCATAACGTACGTACCTATGAGAAATTCCAAAAGCAGCTGCTCT 16 19715115 0.952527267 4 15 71 0.941176471 1.204119983 0.235294118 0.0625 0.117647059 16 1 0 16 3L:19715090-19715146 6 Trpml FBtr0074952 19714416 19715268 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L - 19715086 19715142 3'utr Trpml FlyBase G28935.1 TAAGAGAAACCATAACGTACGTACCTATGAGAAATTCCAAAAGCAGCTGCTCTGATC 10 19715115 0.948664606 5 10 44 1 1.230448921 0.117647059 0.6 0.764705882 10 0 0 17 3L:19715086-19715142 6 11.5 2336 FBgn0262516 372.8066667 14.61333333 22.29666667 0.030847088 0.786952555 0.515772163 -7 -7 -7 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3L 19719711 19719717 - 3L_19719711_19719717_- 0.456698228 0.521219037 0.488958633 0.045623095 CG42637 FBtr0302279|FBtr0302277|FBtr0302278 19719525|19719525|19719525 19720443|19720443|19720443 3L - 19719698 19719754 3'utr CG42637 FlyBase G38298.1 TGTATCAATGTGTTTTGCTAGTACGTAGTTAAGTGCGTGTGATTGTACGTAATATTT 12 19719711 0.819243621 5 10 102 0.846153846 1.041392685 0.153846154 0.083333333 0.153846154 12 2 0 11 3L:19719698-19719754 7 CG42637 FBtr0302278|FBtr0302277|FBtr0302279 19719525|19719525|19719525 19720443|19720443|19720443 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 19719691 19719740 3'utr CG42637 FlyBase G28941.1 TTGCTAGTACGTAGTTAAGTGCGTGTGATTGTACGTAATATTTAAGTCTC 13 19719711 0.930992974 4 13 123 1 1.230448921 0.117647059 0.307692308 0.470588235 13 0 0 17 3L:19719691-19719740 7 9.5 2337 FBgn0261360 1575.906667 29.86333333 45.63333333 0.006028276 0.318115861 0.208181154 -6 -6 -6 0.1 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3L 19720015 19720022 - 3L_19720015_19720022_- 0.630780328 0.630900507 0.630840418 8.50E-05 CG42637 FBtr0302279|FBtr0302277|FBtr0302278 19719525|19719525|19719525 19720443|19720443|19720443 3L - 19719982 19720036 3'utr CG42637 FlyBase G38300.1 AGCCGAAAAAACCGTCTAGTCACAAGGTCTTCAGACTAGTTATTGTTTTATATAA 10 19720022 0.965434724 3 9 52 0.9375 0.875061263 0.5625 0.5 0.6875 10 0 1 15 3L:19719982-19720036 8 CG42637 FBtr0302278|FBtr0302277|FBtr0302279 19719525|19719525|19719525 19720443|19720443|19720443 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L - 19719992 19720036 3'utr CG42637 FlyBase G28943.1 AGCCGAAAAAACCGTCTAGTCACAAGGTCTTCAGACTAGTTATTG 11 19720022 0.937541916 4 11 43 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 3L:19719992-19720036 8 9.5 2338 FBgn0261360 1575.906667 29.86333333 45.63333333 0.006028276 0.318115861 0.208181154 0 0 0 0.1 dme-miR-304-5p 7mer-m8 TGAGATT 3L 19746038 19746044 - 3L_19746038_19746044_- 0.620202126 0.620203442 0.620202784 9.19E-07 CG42638 FBtr0302283 19745832 19746684 3L - 19746023 19746063 5'utr CG42638 FlyBase G38320.1 ACTGCACTGGTCGACAAAATGAGATTTTTGGCAGTCTAAGC 8 19746044 0.957016742 2 8 61 1 0.954242509 0.111111111 0.125 0.222222222 8 0 0 9 3L:19746023-19746063 7 CG42638 FBtr0302283 19745832 19746684 TGAGATT 7mer-m8 dme-miR-304-5p 3L - 19746021 19746062 5'utr CG42638 FlyBase G28957.1 CTGCACTGGTCGACAAAATGAGATTTTTGGCAGTCTAAGCAA 8 19746036 0.830166943 3 7 51 0.9 0.954242509 0.3 0.25 0.4 8 1 0 9 3L:19746021-19746062 7 8 2339 FBgn0261361 372.8066667 14.61333333 22.29666667 0.021458844 0.547445255 0.358798027 0 -8 -4 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3L 19751127 19751133 - 3L_19751127_19751133_- 0.52122383 0.513268677 0.517246253 0.005625105 Gyc76C FBtr0333879|FBtr0302280|FBtr0302282|FBtr0302281 19750941|19750941|19750941|19750941 19751859|19751859|19751859|19751859 3L - 19751106 19751192 3'utr Gyc76C FlyBase G38330.1 AAAACGAGCGTGAAAAATGTAATGTATCAATGTGTTTTGCTAGTACGTAGTTAAGTGCGTGTGATTGTACGTAATATTTAAGTCTCT 18 19751127 0.962774925 6 14 128 0.857142857 0.954242509 0.047619048 0.166666667 0.285714286 18 2 1 18 3L:19751106-19751192 7 Gyc76C FBtr0302282|FBtr0302281|FBtr0333879|FBtr0302280 19750941|19750941|19750941|19750941 19751859|19751859|19751859|19751859 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 19751092 19751152 3'utr Gyc76C FlyBase G28965.1 TAGTACGTAGTTAAGTGCGTGTGATTGTACGTAATATTTAAGTCTCTAAAGCTAAAATAAT 18 19751127 0.990765368 4 15 161 0.888888889 1.380211242 0.259259259 0.388888889 0.592592593 18 3 0 24 3L:19751092-19751152 7 13 2340 FBgn0266136 1575.906667 29.86333333 45.63333333 0.008249219 0.435316442 0.284879474 -6 -6 -6 0.1 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3L 19751431 19751438 - 3L_19751431_19751438_- 0.631120782 0.630490517 0.63080565 0.000445689 Gyc76C FBtr0333879|FBtr0302280|FBtr0302282|FBtr0302281 19750941|19750941|19750941|19750941 19751859|19751859|19751859|19751859 3L - 19751388 19751454 3'utr Gyc76C FlyBase G38332.1 GAAGCCGAAAAAACCGTCTAGTCACAAGGTCTTCAGACTAGTTATTGTTTTATATAAAATAAACACA 15 19751438 0.955641751 5 14 72 0.9375 0.875061263 0.3125 0.066666667 0.125 15 0 1 15 3L:19751388-19751454 8 Gyc76C FBtr0302282|FBtr0302281|FBtr0333879|FBtr0302280 19750941|19750941|19750941|19750941 19751859|19751859|19751859|19751859 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L - 19751401 19751455 3'utr Gyc76C FlyBase G28967.1 AGAAGCCGAAAAAACCGTCTAGTCACAAGGTCTTCAGACTAGTTATTGTTTTATA 12 19751438 0.962288132 4 11 58 0.941176471 1.204119983 0.058823529 0.25 0.470588235 12 1 0 16 3L:19751401-19751455 8 11.5 2341 FBgn0266136 1575.906667 29.86333333 45.63333333 0.007297386 0.385087621 0.252008766 0 0 0 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA 3L 19803083 19803090 + 3L_19803083_19803090_+ 0.623419611 0.622374843 0.622897227 0.000738785 Ir76a FBtr0301606 19802012 19803427 3L + 19803049 19803098 3'utr Ir76a FlyBase G31441.1 AGCGGCTGAAACTTATGGTGGATGATATTTACTTTGCATTTACGGTGGCG 10 19803082 0.753568534 4 10 77 1 1.146128036 0.714285714 0.4 0.571428571 10 0 0 14 3L:19803049-19803098 8 Ir76a FBtr0301606 19802012 19803427 TGCATTTA 8mer-A1 dme-miR-277-3p 3L + 19803041 19803099 3'utr Ir76a FlyBase G23784.1 TGCCCTAAAGCGGCTGAAACTTATGGTGGATGATATTTACTTTGCATTTACGGTGGCGT 7 19803081 0.983702874 4 6 50 1 1 0.4 0.285714286 0.5 7 0 0 10 3L:19803041-19803099 8 5 2342 FBgn0260874 218.0066667 15.19666667 23.07666667 0.022935078 0.329019522 0.216669074 1 2 1.5 0.1 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3L 19810499 19810505 - 3L_19810499_19810505_- 0.620203996 0.620203987 0.620203992 0 Cyp305a1 FBtr0074925 19810401 19810551 3L - 19810466 19810521 3'utr Cyp305a1 FlyBase G38376.1 TATAGGTCAAGAGATATGGTGCTGAATCCACTAGGATATTTCCAAGGATTCCGAAA 97 19810505 0.962216806 8 96 501 0.991735537 1.77815125 0.074380165 0.206185567 0.363636364 97 0 1 120 3L:19810466-19810521 7 Cyp305a1 FBtr0074925 19810401 19810551 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3L - 19810465 19810536 3'utr Cyp305a1 FlyBase G28998.1 CGATGGTGTCGGTATTATAGGTCAAGAGATATGGTGCTGAATCCACTAGGATATTTCCAAGGATTCCGAAAA 69 19810505 0.966688779 6 65 351 0.96 1.681241237 0.15 0.333333333 0.54 69 3 1 96 3L:19810465-19810536 7 80 2343 FBgn0036910 2.666666667 0.18 0.286666667 30 444.4444444 279.0697674 0 0 0 0.1 dme-miR-1003-3p 7mer-A1 TGTGAGA 3L 19816446 19816452 - 3L_19816446_19816452_- 0.598358405 0.598353645 0.598356025 3.39E-06 Fibp FBtr0332728 19816163 19816661 3L - 19816440 19816486 5'utr Fibp FlyBase G38390.1 CAATCGGGAGCTGCGCGATCTTTTCGTCGATCTCTGTGAGAAGCTTA 53 19816452 0.776996573 9 50 428 0.952380952 1.77815125 0.142857143 0.150943396 0.285714286 53 3 0 60 3L:19816440-19816486 7 Fibp FBtr0332728 19816163 19816661 TGTGAGA 7mer-A1 dme-miR-1003-3p 3L - 19816398 19816483 5'utr Fibp FlyBase G29003.1 TCGGGAGCTGCGCGATCTTTTCGTCGATCTCTGTGAGAAGCTTATTGATCCTTGGCGTCAGAATGGCTGGAACCGTGAGCAAGTGA 39 19816452 0.782832515 8 37 298 0.964285714 1.431363764 0.178571429 0.358974359 0.553571429 39 1 1 54 3L:19816398-19816483 7 42 2344 FBgn0036911 257 25.10333333 38.12666667 0.163424125 1.673084584 1.101591187 0 0 0 0.1 dme-miR-14-3p 6mer2-7 AGACTG 3L 19829848 19829853 + 3L_19829848_19829853_+ 0.999958972 0.999999994 0.999979483 2.90E-05 Deaf1 FBtr0332153 19829189 19830686 3L + 19829804 19829872 3'utr Deaf1 FlyBase G31466.1 TCTGAAATTACCATACATATTCGTCGATGTATACACTTTTCATTAGACTGTAAGCGCATAGTTAAACTT 30 19829846 0.986658708 7 29 255 0.967741935 1.477121255 0.35483871 0.033333333 0.064516129 30 1 0 30 3L:19829804-19829872 6 Deaf1 FBtr0332153 19829189 19830686 AGACTG 6mer2-7 dme-miR-14-3p 3L + 19829833 19829865 3'utr Deaf1 FlyBase G23803.1 TATACACTTTTCATTAGACTGTAAGCGCATAGT 11 19829846 0.678610043 2 11 85 1 1.113943352 0.384615385 0.181818182 0.307692308 11 0 0 13 3L:19829833-19829865 6 19.5 2345 FBgn0013799 381.6666667 13.13 20 0.051091703 1.485148515 0.975 2 2 2 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3L 19831866 19831872 - 3L_19831866_19831872_- 0.521223848 0.521223845 0.521223846 0 trc FBtr0074922|FBtr0332154 19831389|19830862 19832075|19832075 3L - 19831841 19831935 3'utr trc FlyBase G38394.1 AAATCCCCGATTTTCCTTTTTGAATGTCTTACCTACATGTGTATTTAAATACTAGCTAACATTTGTGATTCCAAACAAGAGAAGAATATGATAAC 71 19831873 0.982442607 11 70 526 0.988636364 1.939519253 0.011363636 0.197183099 0.352272727 71 1 0 87 3L:19831841-19831935 7 trc FBtr0074922|FBtr0332154 19831389|19830862 19832075|19832075 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 19831853 19831896 3'utr trc FlyBase G29007.1 TGTATTTAAATACTAGCTAACATTTGTGATTCCAAACAAGAGAA 35 19831873 0.916829377 6 31 258 0.865384615 1.653212514 0.019230769 0.371428571 0.576923077 35 7 0 45 3L:19831853-19831896 7 48.5 2346 FBgn0003744 320.6866667 15.89666667 24.39333333 0.151237969 3.050954078 1.988248155 1 1 1 0.1 dme-miR-283-5p 8mer-A1 TGATATTA 3L 19867555 19867562 - 3L_19867555_19867562_- 0.592062879 0.51475084 0.553406859 0.05466791 Rab8 FBtr0074921 19867486 19868552 3L - 19867542 19867607 3'utr Rab8 FlyBase G38404.1 AGTAATATAAATAATGTGAAATTAAATGATAACTAATTGCATATTTGATATTAATTAATTACTTGT 16 19867563 0.776200893 8 16 139 1 1.322219295 0.047619048 0.1875 0.380952381 16 0 0 21 3L:19867542-19867607 8 Rab8 FBtr0074921 19867486 19868552 TGATATTA 8mer-A1 dme-miR-283-5p 3L - 19867548 19867628 3'utr Rab8 FlyBase G29014.1 TTATGAACACATACACAGCGCAGTAATATAAATAATGTGAAATTAAATGATAACTAATTGCATATTTGATATTAATTAATT 12 19867569 0.986614097 9 11 94 0.9375 1.176091259 0.0625 0.333333333 0.5 12 1 0 15 3L:19867548-19867628 8 4.5 2347 FBgn0262518 1251.336667 71.43666667 109.69 0.003596155 0.062992861 0.041024706 1 7 4 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 19867589 19867594 - 3L_19867589_19867594_- 0.979152739 0.902999765 0.941076252 0.053848232 Rab8 FBtr0074921 19867486 19868552 3L - 19867542 19867607 3'utr Rab8 FlyBase G38404.1 AGTAATATAAATAATGTGAAATTAAATGATAACTAATTGCATATTTGATATTAATTAATTACTTGT 16 19867596 0.776200893 8 16 139 1 1.322219295 0.047619048 0.1875 0.380952381 16 0 0 21 3L:19867542-19867607 6 Rab8 FBtr0074921 19867486 19868552 ATGTGA 6mer3-8 dme-miR-1003-3p 3L - 19867548 19867628 3'utr Rab8 FlyBase G29014.1 TTATGAACACATACACAGCGCAGTAATATAAATAATGTGAAATTAAATGATAACTAATTGCATATTTGATATTAATTAATT 12 19867595 0.986614097 9 11 94 0.9375 1.176091259 0.0625 0.333333333 0.5 12 1 0 15 3L:19867548-19867628 6 8 2348 FBgn0262518 1251.336667 71.43666667 109.69 0.006393164 0.111987308 0.072932811 2 1 1.5 0.1 dme-miR-307a-3p 6mer3-8 GGTTGT 3L 19868102 19868107 - 3L_19868102_19868107_- 0.999999887 0.999999262 0.999999574 4.24E-07 Rab8 FBtr0308832|FBtr0308833|FBtr0074921 19868034|19867706|19867486 19868552|19868552|19868552 3L - 19868080 19868183 3'utr Rab8 FlyBase G38408.1 AGCCAATCCAACCCGCCCGCGTCCTTCTCGAAGAGGTTTTAGTATTTACGGAATTATGATTTTCTCTAGCAGCCATGGTTGTCGATTTGTAAATTATTAATTGT 61 19868107 0.809993318 17 60 451 0.986842105 1.875061263 0.078947368 0.213114754 0.368421053 61 1 0 75 3L:19868080-19868183 6 Rab8 FBtr0308832|FBtr0308833|FBtr0074921 19868034|19867706|19867486 19868552|19868552|19868552 GGTTGT 6mer3-8 dme-miR-307a-3p 3L - 19868086 19868179 3'utr Rab8 FlyBase G29019.1 AATCCAACCCGCCCGCGTCCTTCTCGAAGAGGTTTTAGTATTTACGGAATTATGATTTTCTCTAGCAGCCATGGTTGTCGATTTGTAAATTATT 33 19868107 0.984224098 10 31 247 0.906976744 1.591064607 0.11627907 0.242424242 0.418604651 33 4 0 39 3L:19868086-19868179 6 32 2349 FBgn0262518 1251.336667 71.43666667 109.69 0.025572654 0.447949232 0.291731243 0 0 0 0.1 dme-miR-932-5p 6mer2-7 GAATTG 3L 19881258 19881263 + 3L_19881258_19881263_+ 0.999972495 0.994222292 0.997097393 0.004066005 CG8334 FBtr0332148|FBtr0332149|FBtr0332150|FBtr0332151 19881066|19881066|19881066|19881066 19881783|19881783|19881783|19881783 3L + 19881163 19881380 3'utr CG8334 FlyBase G31529.1 TTGTTATTTACTATTCTAAGCCTATTTTGATTTTCTGCAATAGTTGATTAATTATCCCCTAATTAGTTTTAGGACGAATTATTTTTCTTTGCCGAGAATTGTGTAATGCATGTAATATACAATATTCATATTTAGCTTGTAGATGATATGTTATATTGGTTGGCCAATGTGGAGCTTAGGTTGTTACGCCGAACAAATCCATTCTCAATAGTTTCTTG 42 19881252 0.987587027 19 40 368 0.980769231 1.40654018 0.326923077 0.214285714 0.365384615 42 0 1 51 3L:19881163-19881380 6 CG8334 FBtr0332150|FBtr0332151|FBtr0332148|FBtr0332149 19881066|19881066|19881066|19881066 19881783|19881783|19881783|19881783 GAATTG 6mer2-7 dme-miR-932-5p 3L + 19881214 19881282 3'utr CG8334 FlyBase G23841.1 TTATCCCCTAATTAGTTTTAGGACGAATTATTTTTCTTTGCCGAGAATTGTGTAATGCATGTAATATAC 12 19881252 0.987598913 8 11 112 0.947368421 0.954242509 0.421052632 0.333333333 0.578947368 12 0 1 18 3L:19881214-19881282 6 10.5 2350 FBgn0036913 1095.78 21.01 32.23333333 0.009582215 0.499762018 0.325749741 6 6 6 0.1 dme-miR-1007-3p 7mer-A1 GAGCTTA 3L 19881334 19881340 + 3L_19881334_19881340_+ 0.823137195 0.823311946 0.82322457 0.000123532 CG8334 FBtr0332148|FBtr0332149|FBtr0332150|FBtr0332151 19881066|19881066|19881066|19881066 19881783|19881783|19881783|19881783 3L + 19881163 19881380 3'utr CG8334 FlyBase G31529.1 TTGTTATTTACTATTCTAAGCCTATTTTGATTTTCTGCAATAGTTGATTAATTATCCCCTAATTAGTTTTAGGACGAATTATTTTTCTTTGCCGAGAATTGTGTAATGCATGTAATATACAATATTCATATTTAGCTTGTAGATGATATGTTATATTGGTTGGCCAATGTGGAGCTTAGGTTGTTACGCCGAACAAATCCATTCTCAATAGTTTCTTG 42 19881330 0.987587027 19 40 368 0.980769231 1.40654018 0.326923077 0.214285714 0.365384615 42 0 1 51 3L:19881163-19881380 7 CG8334 FBtr0332150|FBtr0332151|FBtr0332148|FBtr0332149 19881066|19881066|19881066|19881066 19881783|19881783|19881783|19881783 GAGCTTA 7mer-A1 dme-miR-1007-3p 3L + 19881286 19881374 3'utr CG8334 FlyBase G23842.1 ATTCATATTTAGCTTGTAGATGATATGTTATATTGGTTGGCCAATGTGGAGCTTAGGTTGTTACGCCGAACAAATCCATTCTCAATAGT 20 19881330 0.983753568 10 16 124 0.903225806 1.447158031 0.225806452 0.45 0.64516129 20 3 0 28 3L:19881286-19881374 7 12 2351 FBgn0036913 1095.78 21.01 32.23333333 0.010951103 0.571156592 0.372285419 4 4 4 0.1 dme-miR-932-5p 6mer3-8 GGAATT 3L 19881472 19881477 + 3L_19881472_19881477_+ 1 1 1 0 CG8334 FBtr0332148|FBtr0332149|FBtr0332150|FBtr0332151 19881066|19881066|19881066|19881066 19881783|19881783|19881783|19881783 3L + 19881448 19881489 3'utr CG8334 FlyBase G31531.1 ATTATTTATGCCAGACCATGTCGTGGAATTCCATTTAATTTG 8 19881476 0.727539148 3 7 68 0.875 0.84509804 0.25 0 0 8 1 0 7 3L:19881448-19881489 6 CG8334 FBtr0332150|FBtr0332151|FBtr0332148|FBtr0332149 19881066|19881066|19881066|19881066 19881783|19881783|19881783|19881783 GGAATT 6mer3-8 dme-miR-932-5p 3L + 19881452 19881495 3'utr CG8334 FlyBase G23844.1 TTTATGCCAGACCATGTCGTGGAATTCCATTTAATTTGTAATTA 5 19881476 0.970495464 5 5 47 1 0.84509804 0.142857143 0.4 0.571428571 5 0 0 7 3L:19881452-19881495 6 6 2352 FBgn0036913 1095.78 21.01 32.23333333 0.005475552 0.285578296 0.186142709 -4 -4 -4 0.1 dme-miR-8-3p 6mer2-7 AGTATT 3L 19881695 19881700 + 3L_19881695_19881700_+ 0.999912532 0.935065137 0.967488835 0.045854036 CG8334 FBtr0332148|FBtr0332149|FBtr0332150|FBtr0332151 19881066|19881066|19881066|19881066 19881783|19881783|19881783|19881783 3L + 19881646 19881730 3'utr CG8334 FlyBase G31534.1 ATGTATTGATTGGCTTGTGTGACGCGCCGAGCAGATTCGGTTCGAAATTAGTATTGCGCTTATCAATTATGACTTCAATATGTCT 36 19881699 0.72950374 10 34 318 0.95 1.579783597 0.125 0.083333333 0.175 36 2 0 38 3L:19881646-19881730 6 CG8334 FBtr0332150|FBtr0332151|FBtr0332148|FBtr0332149 19881066|19881066|19881066|19881066 19881783|19881783|19881783|19881783 AGTATT 6mer2-7 dme-miR-8-3p 3L + 19881680 19881725 3'utr CG8334 FlyBase G23846.1 ATTCGGTTCGAAATTAGTATTGCGCTTATCAATTATGACTTCAATA 24 19881699 0.7325839 6 23 181 0.945945946 1.544068044 0.027027027 0.375 0.594594595 24 2 0 35 3L:19881680-19881725 6 22 2353 FBgn0036913 1095.78 21.01 32.23333333 0.020077023 1.047120419 0.682523268 -4 -4 -4 0.1 dme-bantam-3p 7mer-A1 GATCTCA 3L 19882166 19882172 - 3L_19882166_19882172_- 0.822846048 0.823314149 0.823080099 0.000330997 Mi-2 FBtr0100394|FBtr0302046|FBtr0074919|FBtr0332152 19882049|19882049|19882049|19882049 19882448|19882448|19882448|19882448 3L - 19882154 19882247 3'utr Mi-2 FlyBase G38423.1 TGCAAAACGTTTGACACTTGGCGAATGGCGAGTTCGGTGTTTCCAGGCTTCGGTTTCTGCTCCTGGGGCGGATCGGATCTCAGCAGAGCACGAC 12 19882194 0.969452458 7 11 65 1 1.230448921 0.117647059 0.333333333 0.529411765 12 0 0 17 3L:19882154-19882247 7 Mi-2 FBtr0100394|FBtr0302046|FBtr0074919|FBtr0332152 19882049|19882049|19882049|19882049 19882448|19882448|19882448|19882448 GATCTCA 7mer-A1 dme-bantam-3p 3L - 19882155 19882197 3'utr Mi-2 FlyBase G29028.1 CGGTTTCTGCTCCTGGGGCGGATCGGATCTCAGCAGAGCACGA 11 19882194 0.966642918 2 9 56 0.705882353 1.079181246 0.352941176 0.363636364 0.588235294 11 5 0 12 3L:19882155-19882197 7 8.5 2354 FBgn0262519 3000.776667 56.31 86.75333333 0.0028326 0.150950098 0.097978944 22 22 22 0.1 dme-miR-277-3p 6mer2-7 GCATTT 3L 19912425 19912430 + 3L_19912425_19912430_+ 0.999999293 0.999935025 0.999967159 4.55E-05 Prp3 FBtr0074892|FBtr0074891 19912327|19912327 19912504|19912504 3L + 19912382 19912459 3'utr Prp3 FlyBase G31537.1 TCGGAAAGATACAAGTCTGAATTAAAGTTTTGAAGCGCGCTACGCATTTGATGTTATTATTTTCGAAGCTATTCGGAA 18 19912429 0.980944524 9 15 109 0.884615385 1.361727836 0.192307692 0.222222222 0.461538462 18 3 0 23 3L:19912382-19912459 6 Prp3 FBtr0074892|FBtr0074891 19912327|19912327 19912504|19912504 GCATTT 6mer2-7 dme-miR-277-3p 3L + 19912387 19912436 3'utr Prp3 FlyBase G23847.1 AAGATACAAGTCTGAATTAAAGTTTTGAAGCGCGCTACGCATTTGATGTT 9 19912429 0.990492863 4 6 60 0.777777778 1.146128036 0.555555556 0.555555556 0.777777778 9 4 0 14 3L:19912387-19912436 6 10.5 2355 FBgn0036915 320.61 18.75 28.82333333 0.03275007 0.56 0.364288192 -4 -4 -4 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3L 19918636 19918642 - 3L_19918636_19918642_- 0.808813488 0.808818836 0.808816162 3.75E-06 Su(z)12 FBtr0074917|FBtr0074917|FBtr0074916|FBtr0074916 19918240|19918240|19918240|19918240 19919000|19919000|19919365|19919365 3L - 19918544 19918662 3'utr Su(z)12 FlyBase G38492.1 TTTAATTCTAATTTGGCAGTTACTTAAACTTAACAAATCTACAGGGCTAATGGAAAATCAAAATTCAAAATCGATTTGAATTCCCATGCTTACACTTCACATCCGGTTTGGATTGTGTA 24 19918650 0.98759471 11 24 205 1 1.447158031 0 0.166666667 0.285714286 24 0 0 28 3L:19918544-19918662 7 Su(z)12 FBtr0074916|FBtr0074916|FBtr0074917|FBtr0074917 19918240|19918240|19918240|19918240 19919365|19919365|19919000|19919000 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3L - 19918622 19918667 3'utr Su(z)12 FlyBase G29079.1 TATACTTTAATTCTAATTTGGCAGTTACTTAAACTTAACAAATCTA 19 19918648 0.723865686 5 18 173 0.896551724 1.414973348 0 0.315789474 0.551724138 19 3 0 26 3L:19918622-19918667 7 18 2356 FBgn0020887 388.31 12.01333333 18.55333333 0.046354717 1.498335183 0.970176069 8 6 7 0.1 dme-miR-34-5p 8mer-A1 CACTGCCA 3L 19919163 19919170 - 3L_19919163_19919170_- 0.678407919 0.678407859 0.678407889 0 Su(z)12 FBtr0074916 19918240 19919365 3L - 19919123 19919196 3'utr Su(z)12 FlyBase G38494.2 CAACCGCAACAAAAGCAATAACCATTCACTGCCAGCAACCAGTAACAACGCCAGTAGCAGCAGCAGCAACAGCA 173 19919172 0.999927653 5 171 540 0.979695431 1.586587305 0.020304569 0.10982659 0.218274112 173 0 4 193 3L:19919123-19919196 8 Su(z)12 FBtr0074916 19918240 19919365 CACTGCCA 8mer-A1 dme-miR-34-5p 3L - 19919122 19919195 3'utr Su(z)12 FlyBase G29082.1 AACCGCAACAAAAGCAATAACCATTCACTGCCAGCAACCAGTAACAACGCCAGTAGCAGCAGCAGCAACAGCAA 80 19919172 0.907329834 3 78 240 0.936507937 2.071882007 0 0.3375 0.579365079 80 8 0 118 3L:19919122-19919195 8 123 2357 FBgn0020887 388.31 12.01333333 18.55333333 0.31675723 10.23862375 6.629536471 2 2 2 0.1 dme-miR-965-3p 7mer-m8 TACGCTT 3L 19932238 19932244 + 3L_19932238_19932244_+ 0.620204855 0.620204855 0.620204855 0 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 3L + 19932217 19932276 3'utr RhoGDI FlyBase G31574.1 CACAACTTACAACATACATCATACGCTTTTTGTTTTCCCTCAAACATGCCTTGTAAATGA 53 19932238 0.839527775 8 49 492 0.9375 1.176091259 0.125 0.20754717 0.34375 53 1 3 60 3L:19932217-19932276 7 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 TACGCTT 7mer-m8 dme-miR-965-3p 3L + 19932211 19932272 3'utr RhoGDI FlyBase G23873.1 ACGACACACAACTTACAACATACATCATACGCTTTTTGTTTTCCCTCAAACATGCCTTGTAA 49 19932245 0.923595682 7 42 441 0.882352941 1.77815125 0.235294118 0.367346939 0.544117647 49 8 0 60 3L:19932211-19932272 7 47.5 2358 FBgn0036921 5639.993333 451.2133333 691.66 0.008421996 0.105271712 0.068675361 0 -7 -3.5 0.1 dme-miR-8-3p 6mer2-7 AGTATT 3L 19932334 19932339 + 3L_19932334_19932339_+ 0.996943646 0.9359321 0.966437873 0.043141645 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 3L + 19932294 19932352 3'utr RhoGDI FlyBase G31575.1 AAGTGTAAGCGAATTTTTCCAAAAGTGTAATTGATCGTCAAGTATTTTTGTTAACGGTA 20 19932325 0.977382938 6 20 132 1 1.322219295 0.523809524 0.05 0.095238095 20 0 0 21 3L:19932294-19932352 6 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 AGTATT 6mer2-7 dme-miR-8-3p 3L + 19932290 19932356 3'utr RhoGDI FlyBase G23874.1 CCAAAAGTGTAAGCGAATTTTTCCAAAAGTGTAATTGATCGTCAAGTATTTTTGTTAACGGTATTAA 20 19932325 0.981392546 6 20 148 1 1.462397998 0.517241379 0.35 0.551724138 20 0 0 29 3L:19932290-19932356 6 17.5 2359 FBgn0036921 5639.993333 451.2133333 691.66 0.003102841 0.038784315 0.025301449 9 9 9 0.1 dme-miR-263a-5p 7mer-m1 TGCCATT 3L 19932569 19932575 + 3L_19932569_19932575_+ 0.765586653 0.765586577 0.765586615 7.07E-08 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 3L + 19932425 19932592 3'utr RhoGDI FlyBase G31576.2 AATTGGAATGTGTGCAGATGAAGAGCATTTTTCGCCTAAGTCCTCCTCAATGAGAGTCAAGTCAAAACCAAGTCAAGTCACTAGGCCAGTCAGTCAGTCAGTCAGCCAACCAGTCAGTCAGACAGTCAGTCGTTTGGTTCTTAATGCCATTGCCTATGTTTAACATAC 52 19932569 0.873984594 18 48 345 0.967741935 1.77815125 0.129032258 0.173076923 0.306451613 52 2 0 60 3L:19932425-19932592 7 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 TGCCATT 7mer-m1 dme-miR-263a-5p 3L + 19932387 19932594 3'utr RhoGDI FlyBase G23875.1 TGTAAAGCCATGATAAGTATTTTTGATACCCTATTTGCAATTGGAATGTGTGCAGATGAAGAGCATTTTTCGCCTAAGTCCTCCTCAATGAGAGTCAAGTCAAAACCAAGTCAAGTCACTAGGCCAGTCAGTCAGTCAGTCAGCCAACCAGTCAGTCAGACAGTCAGTCGTTTGGTTCTTAATGCCATTGCCTATGTTTAACATACAT 46 19932569 0.98282691 21 43 325 0.971830986 1.537819095 0.14084507 0.347826087 0.577464789 46 1 1 69 3L:19932387-19932594 7 13.5 2360 FBgn0036921 5639.993333 451.2133333 691.66 0.00239362 0.029919329 0.01951826 0 0 0 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 3L 19932641 19932647 + 3L_19932641_19932647_+ 0.618407601 0.595043982 0.606725791 0.01652056 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 3L + 19932629 19932659 3'utr RhoGDI FlyBase G31577.1 AAGAAAGTTGTTTGCATTTCGCTGTGTATTT 8 19932643 0.620224681 2 8 74 1 1 0.6 0.25 0.4 8 0 0 10 3L:19932629-19932659 7 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 TGCATTT 7mer-m8 dme-miR-277-3p 3L + 19932629 19932658 3'utr RhoGDI FlyBase G23876.1 AAGAAAGTTGTTTGCATTTCGCTGTGTATT 8 19932646 0.66493294 4 8 78 1 1.146128036 0.285714286 0.625 0.785714286 8 0 0 14 3L:19932629-19932658 7 8 2361 FBgn0036921 5639.993333 451.2133333 691.66 0.001418441 0.017729973 0.011566377 -2 -5 -3.5 0.1 dme-miR-33-5p 7mer-A1 AATGCAA 3L 19932884 19932890 + 3L_19932884_19932890_+ 0.782909989 0.78291159 0.782910789 1.13E-06 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 3L + 19932817 19932902 3'utr RhoGDI FlyBase G31579.1 ATTATTCTAACTATATATCTCTGTGTATTTTTTGTGTACAACATACCATATATGCGAAAGCTGATTGAATGCAACCGAAGAGCAAT 35 19932882 0.957582578 5 34 169 0.973684211 1.568201724 0.210526316 0.057142857 0.131578947 35 1 0 37 3L:19932817-19932902 7 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 AATGCAA 7mer-A1 dme-miR-33-5p 3L + 19932856 19932905 3'utr RhoGDI FlyBase G23877.1 AACATACCATATATGCGAAAGCTGATTGAATGCAACCGAAGAGCAATAAA 35 19932882 0.663941034 6 33 139 0.983050847 1.763427994 0.152542373 0.5 0.711864407 34 1 0 58 3L:19932856-19932905 7 31.5 2362 FBgn0036921 5639.993333 451.2133333 691.66 0.005585113 0.069811767 0.045542608 2 2 2 0.1 dme-miR-1007-3p 6mer3-8 TGAGCT 3L 19979008 19979013 - 3L_19979008_19979013_- 0.999972745 0.999793806 0.999883275 0.000126501 CG14182 FBtr0074913|FBtr0346534|FBtr0331802 19978811|19978711|19978811 19979187|19979187|19979187 3L - 19978874 19979058 3'utr CG14182 FlyBase G38509.1 AGTTAACATATTTAAATTAGGTTAAATAAGCTGAAAACTCGAATATGAGCTACACGAATCTCTCATGCACTTGATACATTTTAAAAATTATTTACTTTTAAACCTGATTTTATTTTAATTGATAAATTTAGTTGATAAATGTTTAGTAAGCCAGACTTGATCATATCTAAGGAATAAGCGTAGCC 59 19978993 0.98098522 17 54 398 0.907692308 1.469822016 0.184615385 0.084745763 0.169230769 59 5 1 59 3L:19978874-19979058 6 CG14182 FBtr0331802|FBtr0346534|FBtr0074913 19978811|19978711|19978811 19979187|19979187|19979187 TGAGCT 6mer3-8 dme-miR-1007-3p 3L - 19978948 19979072 3'utr CG14182 FlyBase G29093.1 AAACACTCTATCTTAGTTAACATATTTAAATTAGGTTAAATAAGCTGAAAACTCGAATATGAGCTACACGAATCTCTCATGCACTTGATACATTTTAAAAATTATTTACTTTTAAACCTGATTTT 26 19978994 0.752567745 13 23 177 0.911764706 1.190331698 0.088235294 0.269230769 0.441176471 26 2 1 31 3L:19978948-19979072 6 15 2363 FBgn0036922 39 5.416666667 8.226666667 0.384615385 2.769230769 1.823338736 -20 -19 -19.5 0.1 dme-miR-308-3p 8mer-m1 CTGTGATT 3L 19979131 19979138 - 3L_19979131_19979138_- 0.385560641 0.385560641 0.385560641 0 CG14182 FBtr0074913|FBtr0346534|FBtr0331802 19978811|19978711|19978811 19979187|19979187|19979187 3L - 19979117 19979187 NoAnnotation G38510.1 AGACGTGACCACGGCATCGCTAGATTCCTCATTTCATTTGCAGTTTGCTCTGTGATTTGTTACATCTTTTG 131 19979139 0.810863064 16 124 1446 0.961783439 1.480006943 0.133757962 0.183206107 0.318471338 131 2 4 151 3L:19979117-19979187 8 CG14182 FBtr0331802|FBtr0346534|FBtr0074913 19978811|19978711|19978811 19979187|19979187|19979187 CTGTGATT 8mer-m1 dme-miR-308-3p 3L - 19979117 19979189 stop_codon CG14182 FlyBase G29094.1 AAAGACGTGACCACGGCATCGCTAGATTCCTCATTTCATTTGCAGTTTGCTCTGTGATTTGTTACATCTTTTG 86 19979131 0.992770266 12 80 925 0.946969697 2.096910013 0.075757576 0.465116279 0.651515152 86 7 0 125 3L:19979117-19979189 8 103.5 2364 FBgn0036922 39 5.416666667 8.226666667 2.653846154 19.10769231 12.58103728 1 -7 -3 0.1 dme-miR-282-5p 6mer2-7 GAGGCT 3L 20150143 20150148 - 3L_20150143_20150148_- 0.999994492 0.999999977 0.999997234 3.89E-06 CG42674 FBtr0302712|FBtr0302713|FBtr0302715|FBtr0302714|FBtr0332699|FBtr0302716|FBtr0332698 20149612|20149612|20149612|20149612|20149612|20149612|20149612 20151571|20151571|20151571|20151571|20151571|20151571|20151571 3L - 20150108 20150172 3'utr CG42674 FlyBase G38525.1 TGATTTAAGGGACTACACCACAGTGAGGCTTTGGATTTGGCCAAACGATTTGTACATATTACCCC 63 20150149 0.965852218 5 61 327 0.971014493 1.826074803 0.333333333 0.079365079 0.15942029 63 2 0 67 3L:20150108-20150172 6 CG42674 FBtr0302714|FBtr0302715|FBtr0302713|FBtr0302712|FBtr0332698|FBtr0302716|FBtr0332699 20149612|20149612|20149612|20149612|20149612|20149612|20149612 20151571|20151571|20151571|20151571|20151571|20151571|20151571 GAGGCT 6mer2-7 dme-miR-282-5p 3L - 20150130 20150173 3'utr CG42674 FlyBase G29101.1 TTGATTTAAGGGACTACACCACAGTGAGGCTTTGGATTTGGCCA 41 20150149 0.925082029 2 40 195 0.985714286 1.838849091 0.2 0.487804878 0.7 41 1 0 69 3L:20150130-20150173 6 51 2365 FBgn0261556 3405.386667 53.14 81.81333333 0.014976273 0.959729018 0.623370274 1 1 1 0.1 dme-miR-8-3p 7mer-A1 AGTATTA 3L 20150610 20150616 - 3L_20150610_20150616_- 0.823349374 0.823349559 0.823349467 1.41E-07 CG42674 FBtr0302712|FBtr0302713|FBtr0302715|FBtr0302714|FBtr0332699|FBtr0302716|FBtr0332698 20149612|20149612|20149612|20149612|20149612|20149612|20149612 20151571|20151571|20151571|20151571|20151571|20151571|20151571 3L - 20150593 20150642 3'utr CG42674 FlyBase G38527.1 ACGAAAAAGTTTGTATACCAATATAGAGTATTAGCCGATCTTCGGTCAAA 50 20150620 0.86578485 7 40 408 0.806451613 1.397940009 0.258064516 0.18 0.338709677 50 11 1 50 3L:20150593-20150642 7 CG42674 FBtr0302714|FBtr0302715|FBtr0302713|FBtr0302712|FBtr0332698|FBtr0302716|FBtr0332699 20149612|20149612|20149612|20149612|20149612|20149612|20149612 20151571|20151571|20151571|20151571|20151571|20151571|20151571 AGTATTA 7mer-A1 dme-miR-8-3p 3L - 20150595 20150635 3'utr CG42674 FlyBase G29102.2 AGTTTGTATACCAATATAGAGTATTAGCCGATCTTCGGTCA 37 20150620 0.893453878 5 21 265 0.633333333 1.278753601 0.2 0.405405405 0.633333333 37 21 1 38 3L:20150595-20150635 7 42.5 2366 FBgn0261556 3405.386667 53.14 81.81333333 0.012480227 0.799774181 0.519475228 4 4 4 0.1 dme-miR-184-3p 6mer3-8 TCCGTC 3L 20151515 20151520 - 3L_20151515_20151520_- 0.999998091 0.999852259 0.999925175 0.000103096 CG42674 FBtr0302712|FBtr0302713|FBtr0302715|FBtr0302714|FBtr0332699|FBtr0302716|FBtr0332698 20149612|20149612|20149612|20149612|20149612|20149612|20149612 20151571|20151571|20151571|20151571|20151571|20151571|20151571 3L - 20151494 20151533 3'utr CG42674 FlyBase G38533.1 ACTTAGCCATAGATCCGTCACAAACTACCAGGATAAACTA 14 20151520 0.734943943 3 13 53 0.941176471 1.204119983 0 0.142857143 0.294117647 14 1 0 16 3L:20151494-20151533 6 CG42674 FBtr0302714|FBtr0302715|FBtr0302713|FBtr0302712|FBtr0332698|FBtr0302716|FBtr0332699 20149612|20149612|20149612|20149612|20149612|20149612|20149612 20151571|20151571|20151571|20151571|20151571|20151571|20151571 TCCGTC 6mer3-8 dme-miR-184-3p 3L - 20151488 20151533 3'utr CG42674 FlyBase G29105.1 ACTTAGCCATAGATCCGTCACAAACTACCAGGATAAACTACACGTA 8 20151520 0.948642068 3 8 32 1 1.230448921 0 0.625 0.823529412 8 0 0 17 3L:20151488-20151533 6 10.5 2367 FBgn0261556 3405.386667 53.14 81.81333333 0.00308335 0.197591268 0.128340939 0 0 0 0.1 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3L 20268977 20268984 - 3L_20268977_20268984_- 0.630598618 0.626979705 0.628789161 0.002558949 gogo FBtr0074848 20268857 20269444 3L - 20268960 20269031 3'utr gogo FlyBase G38601.1 ATGAAATTTTGTGATCTTCATTTTGTGCTTGTAAGCATTGGAAAAATTCTAGTCAATACATTAGTCAAAATT 36 20268985 0.840256325 7 35 276 0.976744186 1.322219295 0.139534884 0.138888889 0.279069767 36 0 1 42 3L:20268960-20269031 8 gogo FBtr0074848 20268857 20269444 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L - 20268953 20269001 3'utr gogo FlyBase G29151.1 GTAAGCATTGGAAAAATTCTAGTCAATACATTAGTCAAAATTAATTAGC 19 20268985 0.974340804 3 19 128 1 1.491361694 0.096774194 0.473684211 0.677419355 19 0 0 31 3L:20268953-20269001 8 22.5 2368 FBgn0052227 17 0.396666667 0.6 1.323529412 56.72268908 37.5 1 1 1 0.1 dme-miR-2535b-3p 6mer3-8 CCGTGA 3L 20297192 20297197 - 3L_20297192_20297197_- 0.928400142 0.935753038 0.93207659 0.005199285 Pex23 FBtr0074846 20297127 20297459 3L - 20297170 20297237 3'utr Pex23 FlyBase G38604.1 TTTAGTTTAAGTCTTTTGTTTAGTTTAACAAATCCAGCAGCCGTGATTGTATTTCCTTTTTGTAAGCA 40 20297190 0.741890731 7 38 298 0.960784314 1.389166084 0.078431373 0.225 0.392156863 40 1 1 49 3L:20297170-20297237 6 Pex23 FBtr0074846 20297127 20297459 CCGTGA 6mer3-8 dme-miR-2535b-3p 3L - 20297170 20297213 3'utr Pex23 FlyBase G29153.1 TTAACAAATCCAGCAGCCGTGATTGTATTTCCTTTTTGTAAGCA 23 20297190 0.666846163 4 21 130 0.944444444 1.531478917 0.027777778 0.47826087 0.666666667 23 2 0 34 3L:20297170-20297213 6 28.5 2369 FBgn0052226 261.2133333 7.016666667 10.72666667 0.109106222 4.06175772 2.65692977 -7 -7 -7 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3L 20297348 20297353 - 3L_20297348_20297353_- 0.888934824 0.948765431 0.918850128 0.042306623 Pex23 FBtr0074846 20297127 20297459 3L - 20297298 20297421 3'utr Pex23 FlyBase G38605.1 ACGGACGATCCTGTTTGTTGTATTTATTCATATTTACAAGCTTATATGTGACCATGCCAACGCTTTTTCCAAAGTATATGAAAATAAGATGTTTCCTATTTAAGCTATTTGAAACGTATTATTT 62 20297355 0.985104955 14 59 476 0.960526316 1.562292864 0.184210526 0.177419355 0.328947368 62 2 1 73 3L:20297298-20297421 6 Pex23 FBtr0074846 20297127 20297459 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 20297320 20297391 3'utr Pex23 FlyBase G29154.1 TATTTACAAGCTTATATGTGACCATGCCAACGCTTTTTCCAAAGTATATGAAAATAAGATGTTTCCTATTTA 36 20297378 0.980915157 14 32 231 0.842105263 1.681241237 0.105263158 0.444444444 0.649122807 36 9 0 48 3L:20297320-20297391 6 15.5 2370 FBgn0052226 261.2133333 7.016666667 10.72666667 0.059338472 2.209026128 1.444996892 2 25 13.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3L 20308852 20308857 + 3L_20308852_20308857_+ 1 1 1 0 CG6597 FBtr0074837|FBtr0332775|FBtr0074838|FBtr0344228 20308825|20308825|20308825|20308825 20309194|20309511|20309511|20309194 3L + 20308802 20308927 stop_codon CG6597 FlyBase G31674.2 CACCTCCACAACCGGATCTAGCTGAGAAAAGCTGTATCGAGTCGCCTATTTCTAGTTCAACTTTGGGAGCTCAGTGCGGAGAGGAGTTCGCGGAGACTGAGTCGGAGATGGGATGCGATGCGATGG 27 20308852 0.979593359 12 25 167 0.96875 1.491361694 0.4375 0.111111111 0.25 27 1 0 31 3L:20308802-20308927 6 CG6597 FBtr0074838|FBtr0344228|FBtr0074837|FBtr0332775 20308825|20308825|20308825|20308825 20309511|20309194|20309194|20309511 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 20308839 20308909 5'utr CG6597 FlyBase G23948.1 CGAGTCGCCTATTTCTAGTTCAACTTTGGGAGCTCAGTGCGGAGAGGAGTTCGCGGAGACTGAGTCGGAGA 15 20308852 0.984716353 6 13 104 0.92 1.361727836 0.2 0.466666667 0.68 15 2 0 23 3L:20308839-20308909 6 12.5 2371 FBgn0036967 626.6566667 51.31333333 78.75333333 0.019947127 0.243601403 0.15872344 0 0 0 0.1 dme-miR-277-3p 6mer3-8 TGCATT 3L 20315663 20315668 + 3L_20315663_20315668_+ 0.999755263 0.999998631 0.999876947 0.000172039 alphaSnap FBtr0074840 20315546 20316577 3L + 20315659 20315690 3'utr alphaSnap FlyBase G31702.1 GTGTTGCATTGCTTAACCTGAAAGCACCCAAA 5 20315669 0.96623756 3 4 27 0.8 0.602059991 0.2 0 0 5 1 0 4 3L:20315659-20315690 6 alphaSnap FBtr0074840 20315546 20316577 TGCATT 6mer3-8 dme-miR-277-3p 3L + 20315656 20315692 3'utr alphaSnap FlyBase G23972.1 AACGTGTTGCATTGCTTAACCTGAAAGCACCCAAACG 5 20315670 0.979214049 3 5 35 1 0.954242509 0.111111111 0.4 0.666666667 5 0 0 9 3L:20315656-20315692 6 4.5 2372 FBgn0250791 959.9966667 56.11333333 85.60666667 0.004687516 0.080194844 0.052566 -6 -7 -6.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 20382257 20382262 + 3L_20382257_20382262_+ 0.999957989 1 0.999978994 2.97E-05 RhoBTB FBtr0078185|FBtr0330157|FBtr0330158 20381697|20381881|20381697 20382398|20382398|20382398 3L + 20382186 20382292 3'utr RhoBTB FlyBase G31744.2 TTGTTCTGCACGATCCCTCCCATGGAATGTGGACAGCCGAAGGACGCAGACATGTGTATATCCATATATTTGTACCTTTACCTAAGACATGTATGTATGTATATTTT 19 20382265 0.893786405 13 18 165 0.954545455 1.021189299 0.181818182 0.157894737 0.272727273 19 0 1 21 3L:20382186-20382292 6 RhoBTB FBtr0330158|FBtr0078185|FBtr0330157 20381697|20381697|20381881 20382398|20382398|20382398 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 20382247 20382284 3'utr RhoBTB FlyBase G24002.1 CCATATATTTGTACCTTTACCTAAGACATGTATGTATG 10 20382263 0.601295405 4 8 89 0.857142857 0.77815125 0.571428571 0.4 0.571428571 10 1 1 12 3L:20382247-20382284 6 10 2373 FBgn0036980 400.9966667 15.65333333 23.82333333 0.024937863 0.638841567 0.419756541 -8 -6 -7 0.1 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 20391198 20391203 + 3L_20391198_20391203_+ 0.999764408 0.999798258 0.999781333 2.40E-05 fbl FBtr0307392|FBtr0078189|FBtr0307393|FBtr0078186|FBtr0078190|FBtr0078187|FBtr0078188 20391181|20391181|20391181|20391181|20391181|20391181|20391181 20391454|20391913|20391913|20391454|20391454|20391913|20391454 3L + 20391166 20391225 stop_codon fbl FlyBase G31756.1 AACACTCCACTAGATAGTCGCTATAACCACATGTTCCTCCCAAGGGCACCCAACGTGCGC 105 20391197 0.78491325 4 105 522 1 2.06069784 0.060869565 0.095238095 0.173913043 105 0 0 115 3L:20391166-20391225 6 fbl FBtr0078187|FBtr0078188|FBtr0078190|FBtr0307393|FBtr0078186|FBtr0307392|FBtr0078189 20391181|20391181|20391181|20391181|20391181|20391181|20391181 20391913|20391454|20391454|20391913|20391454|20391454|20391913 GTTCCT 6mer2-7 dme-miR-276a-3p 3L + 20391167 20391229 stop_codon fbl FlyBase G24012.1 ACACTCCACTAGATAGTCGCTATAACCACATGTTCCTCCCAAGGGCACCCAACGTGCGCCAGC 58 20391197 0.919911695 3 58 296 1 1.963787827 0.054347826 0.379310345 0.608695652 58 0 0 92 3L:20391167-20391229 6 80.5 2374 FBgn0011205 689.3733333 36.86333333 56.25 0.116772721 2.183741749 1.431111111 1 1 1 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA 3L 20391357 20391362 + 3L_20391357_20391362_+ 0.922120072 0.999685933 0.960903002 0.054847303 fbl FBtr0307392|FBtr0078189|FBtr0307393|FBtr0078186|FBtr0078190|FBtr0078187|FBtr0078188 20391181|20391181|20391181|20391181|20391181|20391181|20391181 20391454|20391913|20391913|20391454|20391454|20391913|20391454 3L + 20391329 20391357 3'utr fbl FlyBase G31758.1 TAATTCTTTCTCGGCTTTAGTTGTAACTT 5 20391345 0.740624447 3 5 59 1 0.698970004 0.2 0 0 5 0 0 5 3L:20391329-20391357 1 fbl FBtr0078187|FBtr0078188|FBtr0078190|FBtr0307393|FBtr0078186|FBtr0307392|FBtr0078189 20391181|20391181|20391181|20391181|20391181|20391181|20391181 20391913|20391454|20391454|20391913|20391454|20391454|20391913 TGATGA 6mer3-8 dme-miR-2a-2-5p 3L + 20391314 20391366 3'utr fbl FlyBase G24014.1 TCTCGGTATTTATCGTAATTCTTTCTCGGCTTTAGTTGTAACTTGATGACGCA 8 20391345 0.991382974 6 7 73 1 1.041392685 0.090909091 0.375 0.545454545 8 0 0 11 3L:20391314-20391366 6 5.5 2375 FBgn0011205 689.3733333 36.86333333 56.25 0.00797826 0.149199747 0.097777778 12 12 12 0.1 dme-miR-968-5p 7mer-A1 CTACTTA 3L 20391837 20391843 + 3L_20391837_20391843_+ 0.817104735 0.818344776 0.817724755 0.000876883 fbl FBtr0078189|FBtr0307393|FBtr0078187 20391181|20391181|20391181 20391913|20391913|20391913 3L + 20391786 20391914 3'utr fbl FlyBase G31761.1 TGATGATACAGTTTAAAAACAAGACGGTAATAGCCTTCTCTCTACCTTTGCCTACTTATACAATTATTGTTAAGGTTTGTGTTATTCTAAAAAAATTCCGTAATAAACTAGACACGAGTTGTTCTGATA 32 20391834 0.987834736 12 29 259 0.911111111 1.135662602 0.155555556 0.28125 0.488888889 32 2 2 41 3L:20391786-20391914 7 fbl FBtr0078187|FBtr0307393|FBtr0078189 20391181|20391181|20391181 20391913|20391913|20391913 CTACTTA 7mer-A1 dme-miR-968-5p 3L + 20391797 20391839 3'utr fbl FlyBase G24017.1 TTTAAAAACAAGACGGTAATAGCCTTCTCTCTACCTTTGCCTA 12 20391834 0.986940158 2 11 97 0.941176471 0.903089987 0.058823529 0.25 0.470588235 12 0 1 16 3L:20391797-20391839 3 12.5 2376 FBgn0011205 689.3733333 36.86333333 56.25 0.01813241 0.339090334 0.222222222 3 3 3 0.1 dme-miR-1008-3p 7mer-A1 GCTGTGA 3L 20428169 20428175 - 3L_20428169_20428175_- 0.815856995 0.822444619 0.819150807 0.004658137 CG5262 FBtr0078230|FBtr0310615 20428098|20427960 20428352|20428352 3L - 20428141 20428206 3'utr CG5262 FlyBase G38672.1 ATTTTAGCAACGTAAGTCAGTATTGAAATCGGCTGTGACACAAATTTTCAATATATTTTTTATATA 101 20428184 0.969421902 9 92 650 0.920353982 1.539912085 0.10619469 0.118811881 0.212389381 101 7 2 104 3L:20428141-20428206 7 CG5262 FBtr0078230|FBtr0310615 20428098|20427960 20428352|20428352 GCTGTGA 7mer-A1 dme-miR-1008-3p 3L - 20428151 20428213 3'utr CG5262 FlyBase G29203.1 TAATCGAATTTTAGCAACGTAAGTCAGTATTGAAATCGGCTGTGACACAAATTTTCAATATAT 69 20428182 0.673608042 10 59 430 0.845360825 1.135662602 0.257731959 0.31884058 0.515463918 69 10 5 82 3L:20428151-20428213 7 77 2377 FBgn0036988 148.2966667 9.42 14.41 0.519229472 8.174097665 5.34351145 9 7 8 0.1 dme-miR-970-3p 6mer3-8 TCTTAT 3L 20428343 20428348 - 3L_20428343_20428348_- 0.999999874 0.999999977 0.999999925 7.07E-08 CG5262 FBtr0078230|FBtr0310615 20428098|20427960 20428352|20428352 3L - 20428326 20428354 stop_codon CG5262 FlyBase G38673.1 AAGTTATCTTATCTGCCAATGTGGAGATA 5 20428346 0.591025554 4 5 37 1 0.698970004 0 0 0 5 0 0 5 3L:20428326-20428354 6 CG5262 FBtr0078230|FBtr0310615 20428098|20427960 20428352|20428352 TCTTAT 6mer3-8 dme-miR-970-3p 3L - 20428329 20428354 stop_codon CG5262 FlyBase G29205.1 AAGTTATCTTATCTGCCAATGTGGAG 6 20428346 0.683066354 3 5 38 0.6 0.77815125 0 0.333333333 0.6 6 4 0 6 3L:20428329-20428354 6 5 2378 FBgn0036988 148.2966667 9.42 14.41 0.0337162 0.530785563 0.346981263 -2 -2 -2 0.1 dme-miR-252-5p 8mer-m1 GTACTTAG 3L 20450494 20450501 + 3L_20450494_20450501_+ 0.636686439 0.636789085 0.636737762 7.26E-05 CG5910 FBtr0300411|FBtr0078195 20450395|20450395 20450580|20450580 3L + 20450459 20450521 3'utr CG5910 FlyBase G31807.1 AAGTAGGATCTAGTCGTAGTAGCATTCAAATAAGTGTACTTAGTTCAACAAATGTCCAGTGGT 7 20450498 0.897652122 5 6 40 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 3L:20450459-20450521 8 CG5910 FBtr0300411|FBtr0078195 20450395|20450395 20450580|20450580 GTACTTAG 8mer-m1 dme-miR-252-5p 3L + 20450455 20450514 3'utr CG5910 FlyBase G24046.1 AGAGAAGTAGGATCTAGTCGTAGTAGCATTCAAATAAGTGTACTTAGTTCAACAAATGTC 7 20450498 0.983702598 5 5 41 0.75 0.77815125 0.375 0.142857143 0.25 7 2 0 6 3L:20450455-20450514 8 3 2379 FBgn0036993 5.333333333 0.613333333 0.916666667 0.5625 4.891304348 3.272727273 -4 -4 -4 0.1 dme-miR-8-3p 6mer2-7 AGTATT 3L 20469711 20469716 - 3L_20469711_20469716_- 0.991696279 0.99999716 0.99584672 0.005869623 CG32428 FBtr0303381 20469672 20469796 3L - 20469700 20469747 3'utr CG32428 FlyBase G38694.1 AAGCTGTCGCAAACTAAAGGTGCTTACCAATAGTATTTGAGTTCGAAT 18 20469710 0.700257765 5 18 119 1 1.380211242 0.416666667 0.166666667 0.375 18 0 0 24 3L:20469700-20469747 6 CG32428 FBtr0303381 20469672 20469796 AGTATT 6mer2-7 dme-miR-8-3p 3L - 20469696 20469747 3'utr CG32428 FlyBase G29214.1 AAGCTGTCGCAAACTAAAGGTGCTTACCAATAGTATTTGAGTTCGAATAAAC 14 20469710 0.687443341 5 13 95 1 1.301029996 0.3 0.285714286 0.5 14 0 0 20 3L:20469696-20469747 6 11.5 2380 FBgn0052428 469.8933333 37.72333333 57.65 0.024473639 0.304851109 0.199479618 -6 -6 -6 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 20470525 20470532 - 3L_20470525_20470532_- 0.500117193 0.500117825 0.500117509 4.24E-07 CG32428 FBtr0300452 20470021 20470894 3L - 20470514 20470556 3'utr CG32428 FlyBase G38700.1 TAAGTCGAACATCGAACATAAACTGTACTTAACTACCTAAAGA 170 20470533 0.821063557 3 170 1032 1 2.322219295 0.161904762 0.205882353 0.357142857 170 0 0 210 3L:20470514-20470556 8 CG32428 FBtr0300452 20470021 20470894 GTACTTAA 8mer-A1 dme-miR-252-5p 3L - 20470447 20470555 3'utr CG32428 FlyBase G29219.1 AAGTCGAACATCGAACATAAACTGTACTTAACTACCTAAAGAATTGAAATACGTAATTAATTTCAAAAAGTAATAGTTAGACCTGCGAAACATTGCAATCACAAAAAAG 141 20470533 0.97224245 7 141 838 1 2.274157849 0.143617021 0.29787234 0.473404255 141 0 0 188 3L:20470447-20470555 8 153.5 2381 FBgn0052428 469.8933333 37.72333333 57.65 0.326669883 4.069099585 2.662619254 1 1 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 20510939 20510944 + 3L_20510939_20510944_+ 0.999868906 0.999998583 0.999933745 9.17E-05 CG32425 FBtr0113436|FBtr0078204 20510792|20510792 20511058|20511058 3L + 20510919 20510959 3'utr CG32425 FlyBase G31834.1 ACAACAAATGCTATACAAATACCAAATCTACACGAGCCGCC 16 20510938 0.940333725 2 14 66 0.888888889 1.204119983 0.055555556 0.125 0.222222222 16 2 0 16 3L:20510919-20510959 6 CG32425 FBtr0078204|FBtr0113436 20510792|20510792 20511058|20511058 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 20510891 20510983 3'utr CG32425 FlyBase G24063.1 ACAACTACCAATTCTACCACCAAGCAGAACAACAAATGCTATACAAATACCAAATCTACACGAGCCGCCCACAACCACGCCCACGCCTCCTGC 11 20510938 0.938303452 5 11 43 1 1.176091259 0 0.363636364 0.533333333 11 0 0 15 3L:20510891-20510983 6 11.5 2382 FBgn0052425 913.0466667 51.64333333 79.68666667 0.012595194 0.222681211 0.144315235 1 1 1 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 3L 20514032 20514037 + 3L_20514032_20514037_+ 0.889987593 0.999997273 0.944992433 0.077788605 CG32425 FBtr0078205|FBtr0078202|FBtr0078203 20513685|20513685|20513685 20514107|20514107|20514107 3L + 20514003 20514081 3'utr CG32425 FlyBase G31838.1 CCACACGGAATATGTATTAGTTTCGGAACTGTGTTAATCACCTAAGTATTTAGACACTATTACCTAATAAAACTTTAAA 26 20514035 0.976145597 10 21 220 0.8 1.079181246 0.033333333 0.153846154 0.266666667 26 5 1 24 3L:20514003-20514081 6 CG32425 FBtr0078202|FBtr0078205|FBtr0078203 20513685|20513685|20513685 20514107|20514107|20514107 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 20513997 20514045 3'utr CG32425 FlyBase G24070.1 CAGCAACCACACGGAATATGTATTAGTTTCGGAACTGTGTTAATCACCT 8 20514023 0.982026513 7 8 60 1 1.113943352 0 0.5 0.692307692 8 0 0 13 3L:20513997-20514045 6 12 2383 FBgn0052425 913.0466667 51.64333333 79.68666667 0.013142811 0.232363003 0.15058981 -3 9 3 0.1 dme-miR-1003-3p 7mer-m8 ATGTGAG 3L 20514685 20514691 - 3L_20514685_20514691_- 0.671796207 0.583304757 0.627550482 0.062572869 CG5059 FBtr0331567|FBtr0078217|FBtr0078219|FBtr0078218|FBtr0078216 20514596|20514597|20514596|20514596|20514597 20515331|20515331|20515331|20515331|20515331 3L - 20514624 20514926 3'utr CG5059 FlyBase G38708.1 ATTATATCCAATACAAATGTACGCCGAACTTCGTGTTAAGAATTTCAATTTCATCATCATACATCATATAGAACAACCATAAACATTTGTAGACATATTATAGTTGAATCGTATTGTATCCTGATTGTACTTTTTGTTGAACAATCGTCAAATGTTTCGATACAATAAGCATATAAGAAAAACGATACAAAAGGAGAAAAAAAAACAATATGGCACACATAAGATTATATCTTTAATGTGAGGGAAGGGTTATCCCCCACACAAAAAAAACAGAATAGTTGTAATGATTTTTTATATTAAAAT 135 20514717 0.882318553 45 119 856 0.886227545 1.86923172 0.065868263 0.2 0.353293413 135 18 1 148 3L:20514624-20514926 7 CG5059 FBtr0078218|FBtr0078216|FBtr0078217|FBtr0078219|FBtr0331567 20514596|20514597|20514597|20514596|20514596 20515331|20515331|20515331|20515331|20515331 ATGTGAG 7mer-m8 dme-miR-1003-3p 3L - 20514667 20514835 3'utr CG5059 FlyBase G29224.1 GACATATTATAGTTGAATCGTATTGTATCCTGATTGTACTTTTTGTTGAACAATCGTCAAATGTTTCGATACAATAAGCATATAAGAAAAACGATACAAAAGGAGAAAAAAAAACAATATGGCACACATAAGATTATATCTTTAATGTGAGGGAAGGGTTATCCCCCAC 54 20514717 0.982623523 21 51 368 0.946666667 1.851258349 0.2 0.314814815 0.506666667 54 4 0 71 3L:20514667-20514835 7 17 2384 FBgn0037007 1992.566667 140.1466667 214.2533333 0.00853171 0.121301494 0.079345323 26 26 26 0.1 dme-miR-980-3p 6mer3-8 GGCAGC 3L 20515006 20515011 - 3L_20515006_20515011_- 0.999999876 0.999500028 0.999749952 0.000353483 CG5059 FBtr0331567|FBtr0078217|FBtr0078219|FBtr0078218|FBtr0078216 20514596|20514597|20514596|20514596|20514597 20515331|20515331|20515331|20515331|20515331 3L - 20514965 20515038 3'utr CG5059 FlyBase G38709.1 AATTTTATATATTTAACATTATATCAAGGCAGCAAATCTAATGATACAGAAAAGCATTTATAGATGCTCCATAT 52 20514999 0.679503473 12 46 290 0.888888889 1.271066772 0 0.134615385 0.285714286 52 5 2 56 3L:20514965-20515038 6 CG5059 FBtr0078218|FBtr0078216|FBtr0078217|FBtr0078219|FBtr0331567 20514596|20514597|20514597|20514596|20514596 20515331|20515331|20515331|20515331|20515331 GGCAGC 6mer3-8 dme-miR-980-3p 3L - 20514967 20515036 3'utr CG5059 FlyBase G29226.1 TTTTATATATTTAACATTATATCAAGGCAGCAAATCTAATGATACAGAAAAGCATTTATAGATGCTCCAT 38 20514998 0.69539842 10 34 208 0.93442623 1.755874856 0 0.315789474 0.573770492 38 4 0 57 3L:20514967-20515036 6 38 2385 FBgn0037007 1992.566667 140.1466667 214.2533333 0.01907088 0.271144515 0.177360134 -12 -13 -12.5 0.1 dme-bantam-3p 8mer-A1 TGATCTCA 3L 20743899 20743906 + 3L_20743899_20743906_+ 0.631136385 0.631136385 0.631136385 0 CG13252 FBtr0078245 20743657 20744508 3L + 20743879 20743927 3'utr CG13252 FlyBase G31851.1 TGCCTTTATTTGTTTGGTATTGATCTCATTTAAACTTTTCACTCTTCAC 98 20743898 0.623514127 15 96 1093 0.983870968 1.785329835 0 0.214285714 0.379032258 98 1 1 122 3L:20743879-20743927 8 CG13252 FBtr0078245 20743657 20744508 TGATCTCA 8mer-A1 dme-bantam-3p 3L + 20743882 20743917 3'utr CG13252 FlyBase G24078.1 CTTTATTTGTTTGGTATTGATCTCATTTAAACTTTT 68 20743898 0.624469351 9 65 742 0.96875 1.491361694 0 0.294117647 0.5 68 1 2 93 3L:20743882-20743917 8 82.5 2386 FBgn0037016 248.3333333 12.01 18.50666667 0.332214765 6.869275604 4.457853026 1 1 1 0.1 dme-miR-283-5p 6mer3-8 TGATAT 3L 20744258 20744263 + 3L_20744258_20744263_+ 0.604926124 0.45972307 0.532324597 0.102674026 CG13252 FBtr0078245 20743657 20744508 3L + 20744203 20744277 3'utr CG13252 FlyBase G31853.1 AACTAATCGAGACACGTCTTAGATTTTAGTGTTAGCTTCTAATTTAGGAAGTATGTGATATATATGCTAATTAGC 17 20744265 0.988732764 9 17 161 1 1.255272505 0.166666667 0.058823529 0.111111111 17 0 0 18 3L:20744203-20744277 6 CG13252 FBtr0078245 20743657 20744508 TGATAT 6mer3-8 dme-miR-283-5p 3L + 20744216 20744296 3'utr CG13252 FlyBase G24081.1 ACGTCTTAGATTTTAGTGTTAGCTTCTAATTTAGGAAGTATGTGATATATATGCTAATTAGCCTATGTAATTTGTCAACCA 23 20744254 0.990359796 11 21 216 0.971428571 1.531478917 0 0.434782609 0.628571429 23 1 0 34 3L:20744216-20744296 6 12 2387 FBgn0037016 248.3333333 12.01 18.50666667 0.048322148 0.999167361 0.648414986 -7 4 -1.5 0.1 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 20768379 20768386 - 3L_20768379_20768386_- 0.66873424 0.668734278 0.668734259 7.07E-08 CG4074 FBtr0345811|FBtr0078280 20768205|20768340 20768406|20768406 3L - 20768362 20768405 3'utr CG4074 FlyBase G38739.1 CAAATAAACTTTCCAATATGGCAGCTATTTTATGAACATAAAAG 51 20768388 0.872123206 5 51 442 1 1.799340549 0 0.137254902 0.301587302 51 0 0 63 3L:20768362-20768405 8 CG4074 FBtr0345811|FBtr0078280 20768205|20768340 20768406|20768406 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L - 20768360 20768404 3'utr CG4074 FlyBase G29248.1 AAATAAACTTTCCAATATGGCAGCTATTTTATGAACATAAAAGTT 28 20768387 0.979479987 4 25 256 0.888888889 1.204119983 0 0.285714286 0.444444444 28 3 1 32 3L:20768360-20768404 8 39.5 2388 FBgn0037017 21.33333333 2.336666667 3.576666667 1.8515625 16.90442225 11.04380242 2 1 1.5 0.1 dme-miR-282-5p 6mer2-7 GAGGCT 3L 20780121 20780126 + 3L_20780121_20780126_+ 1 0.953480838 0.976740419 0.032894042 Pex14 FBtr0078251 20780105 20780378 3L + 20780062 20780143 stop_codon Pex14 FlyBase G31875.1 GAGGTGGTCACCAAGAATAGTGACTCCAGCTTGGAGATCATGTAATGCAATCAGAATACGAGGCTGGCTATATAGACGTAGT 11 20780131 0.973522203 7 10 62 0.866666667 1.113943352 0.066666667 0.272727273 0.466666667 11 2 0 13 3L:20780062-20780143 6 Pex14 FBtr0078251 20780105 20780378 GAGGCT 6mer2-7 dme-miR-282-5p 3L + 20780091 20780144 stop_codon Pex14 FlyBase G24092.1 CTTGGAGATCATGTAATGCAATCAGAATACGAGGCTGGCTATATAGACGTAGTA 7 20780131 0.978518441 4 6 42 0.941176471 1.204119983 0.235294118 0.571428571 0.823529412 7 1 0 16 3L:20780091-20780144 6 5 2389 FBgn0037020 373.37 37.02333333 56.88333333 0.013391542 0.135049968 0.087899209 -10 -10 -10 0.1 dme-miR-14-3p 6mer3-8 AAGACT 3L 20780187 20780192 + 3L_20780187_20780192_+ 0.998188059 0.996781128 0.997484594 0.000994899 Pex14 FBtr0078251 20780105 20780378 3L + 20780154 20780321 3'utr Pex14 FlyBase G31876.1 GCTGTAAATTGAGTTTCCCCGTTAAATGCCTTCAAGACTTTTGGTTTTTTTTCTTTGCGTTTATAGCATTTAAGGTTTCTTTATAGTCAACAGCTAATCCATATCCAAAAGTACATACACACACTCACATATACACACTTATGCGATACGATGTCTATACAATGTAAT 55 20780208 0.991396945 15 53 567 0.938461538 1.785329835 0.338461538 0.145454545 0.276923077 55 4 0 61 3L:20780154-20780321 6 Pex14 FBtr0078251 20780105 20780378 AAGACT 6mer3-8 dme-miR-14-3p 3L + 20780174 20780248 3'utr Pex14 FlyBase G24093.1 GTTAAATGCCTTCAAGACTTTTGGTTTTTTTTCTTTGCGTTTATAGCATTTAAGGTTTCTTTATAGTCAACAGCT 31 20780194 0.754003682 9 31 323 1 1.662757832 0.369565217 0.35483871 0.565217391 31 0 0 46 3L:20780174-20780248 6 15.5 2390 FBgn0037020 373.37 37.02333333 56.88333333 0.04151378 0.418654902 0.272487548 -21 -7 -14 0.1 dme-miR-277-3p 6mer2-7 GCATTT 3L 20780381 20780386 - 3L_20780381_20780386_- 0.890234603 0.921714213 0.905974408 0.022259439 CG11399 FBtr0078277 20780348 20781657 3L - 20780331 20780397 3'utr CG11399 FlyBase G38749.1 AACTACACAAAGCATTTTTGCGCTTAATTAAACAGTTTCTTTCAATTCAAACCTGTTATTATGTAAA 26 20780380 0.690028668 7 25 217 0.965517241 1.447158031 0.034482759 0.115384615 0.206896552 26 1 0 28 3L:20780331-20780397 6 CG11399 FBtr0078277 20780348 20781657 GCATTT 6mer2-7 dme-miR-277-3p 3L - 20780365 20780399 3'utr CG11399 FlyBase G29253.1 AAAACTACACAAAGCATTTTTGCGCTTAATTAAAC 24 20780380 0.674359685 6 24 197 1 1.591064607 0 0.458333333 0.666666667 24 0 0 39 3L:20780365-20780399 6 22.5 2391 FBgn0037021 631 17.94666667 27.51333333 0.035657686 1.25371471 0.817785316 -6 -6 -6 0.1 dme-miR-33-5p 6mer2-7 AATGCA 3L 20780944 20780949 - 3L_20780944_20780949_- 0.999825825 0.999812809 0.999819317 9.19E-06 CG11399 FBtr0078277 20780348 20781657 3L - 20780872 20781044 3'utr CG11399 FlyBase G38750.2 GAAATAGCTGATAAAAATGCCGGCCTGGCCGCTGTTTATCTTATACGATTGTACCCAACAAACAAGGGCCAAGCTACCCAACAAAAGACTCTAATAATGCATACATAGTATGGGTAGGGGTACTGTTCTCTATCCTTGTTTCAGGGTATTTCGCAATGGTTTGTCCATTCACA 46 20780952 0.963992638 14 44 213 0.962264151 1.707570176 0.169811321 0.130434783 0.245283019 46 2 0 51 3L:20780872-20781044 6 CG11399 FBtr0078277 20780348 20781657 AATGCA 6mer2-7 dme-miR-33-5p 3L - 20780940 20781000 3'utr CG11399 FlyBase G29255.1 ACGATTGTACCCAACAAACAAGGGCCAAGCTACCCAACAAAAGACTCTAATAATGCATACA 18 20780952 0.913435509 5 18 59 1 1.531478917 0.147058824 0.444444444 0.705882353 18 0 0 34 3L:20780940-20781000 6 10 2392 FBgn0037021 631 17.94666667 27.51333333 0.015847861 0.557206538 0.363460141 3 3 3 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT 3L 20781099 20781105 - 3L_20781099_20781105_- 0.658999319 0.65899889 0.658999105 2.83E-07 CG11399 FBtr0078277 20780348 20781657 3L - 20781061 20781162 3'utr CG11399 FlyBase G38751.1 ATTTTTGTACTTCTTGTCAAAGCTTTAATTTTCAAACGTACACAGTGCTCGGCCTTTGGCAGCTGGTATTGCCCCCATCGCAAGGTATAATTAATTGTAAAT 138 20781106 0.771048009 16 137 943 0.993975904 2.217483944 0.186746988 0.173913043 0.313253012 138 1 0 165 3L:20781061-20781162 7 CG11399 FBtr0078277 20780348 20781657 GGCAGCT 7mer-m8 dme-miR-980-3p 3L - 20781061 20781126 3'utr CG11399 FlyBase G29256.1 CGTACACAGTGCTCGGCCTTTGGCAGCTGGTATTGCCCCCATCGCAAGGTATAATTAATTGTAAAT 102 20781106 0.773926277 7 102 651 1 2.204119983 0.2625 0.352941176 0.5875 102 0 0 160 3L:20781061-20781126 7 110 2393 FBgn0037021 631 17.94666667 27.51333333 0.174326466 6.129271917 3.998061546 1 1 1 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG 3L 20813052 20813057 + 3L_20813052_20813057_+ 0.941984938 0.999989659 0.970987299 0.041015587 HIPP1 FBtr0078256|FBtr0331524|FBtr0331525|FBtr0331526 20812877|20812877|20812877|20812877 20813332|20813332|20813332|20813332 3L + 20813038 20813070 3'utr HIPP1 FlyBase G31915.1 TGTAAAGTACGAACGCTGTGTAAATTGTAAGAA 9 20813058 0.712759545 2 8 41 0.888888889 0.903089987 0.222222222 0 0 9 1 0 8 3L:20813038-20813070 6 HIPP1 FBtr0331526|FBtr0331525|FBtr0331524|FBtr0078256 20812877|20812877|20812877|20812877 20813332|20813332|20813332|20813332 GCTGTG 6mer2-7 dme-miR-1008-3p 3L + 20813035 20813069 3'utr HIPP1 FlyBase G24118.1 CATTGTAAAGTACGAACGCTGTGTAAATTGTAAGA 7 20813056 0.675640279 3 6 39 1 1.146128036 0 0.571428571 0.785714286 7 0 0 14 3L:20813035-20813069 6 7 2394 FBgn0037027 1180 42.52 65.28666667 0.005932203 0.16462841 0.107219442 -6 -4 -5 0.1 dme-miR-970-3p 6mer3-8 TCTTAT 3L 20839152 20839157 - 3L_20839152_20839157_- 1 0.999999915 0.999999958 7.07E-08 CSN3 FBtr0078269 20839094 20839324 3L - 20839123 20839182 3'utr CSN3 FlyBase G38790.1 CAGCTACCACAACAACAAACTGCGCTCTTATTGCAAATTTAAAGATGAACATGCTATTTT 12 20839155 0.97654121 4 12 78 1 1.176091259 0 0.166666667 0.333333333 12 0 0 15 3L:20839123-20839182 6 CSN3 FBtr0078269 20839094 20839324 TCTTAT 6mer3-8 dme-miR-970-3p 3L - 20839119 20839174 3'utr CSN3 FlyBase G29289.1 ACAACAACAAACTGCGCTCTTATTGCAAATTTAAAGATGAACATGCTATTTTAAAT 9 20839155 0.976491235 4 9 59 1 1.079181246 0 0.222222222 0.416666667 9 0 0 12 3L:20839119-20839174 6 9.5 2395 FBgn0027055 526.47 38.38666667 58.78666667 0.018044713 0.247481765 0.16160127 -2 -2 -2 0.1 dme-miR-31a-5p 6mer3-8 TCTTGC 3L 20839197 20839202 - 3L_20839197_20839202_- 1 1 1 0 CSN3 FBtr0078269 20839094 20839324 3L - 20839187 20839266 3'utr CSN3 FlyBase G38791.1 ATCCCCAACACCGTTTACCAGAACTTGTCGAAGCCGCGAGGCCCTGGGCCCGAAAGCTGACGTCTCTTGCAGTCCGTACT 8 20839200 0.964220181 6 8 42 1 0.903089987 0 0 0 8 0 0 8 3L:20839187-20839266 6 CSN3 FBtr0078269 20839094 20839324 TCTTGC 6mer3-8 dme-miR-31a-5p 3L - 20839185 20839237 3'utr CSN3 FlyBase G29290.1 GAAGCCGCGAGGCCCTGGGCCCGAAAGCTGACGTCTCTTGCAGTCCGTACTCA 6 20839209 0.914893565 3 5 19 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 3L:20839185-20839237 6 4 2396 FBgn0027055 526.47 38.38666667 58.78666667 0.007597774 0.104202848 0.06804264 -2 7 2.5 0.1 dme-miR-305-3p 6mer3-8 ATGTGC 3L 20926200 20926205 - 3L_20926200_20926205_- 0.999755245 0.999899536 0.99982739 0.000102036 fng FBtr0078267 20925889 20926399 3L - 20926180 20926226 3'utr fng FlyBase G38802.1 ATGTAGCAATACGCTGGACAGATGTGCTTCCTAATGGTATAAGTAAT 25 20926204 0.880622983 3 25 169 1 1.447158031 0.214285714 0.12 0.214285714 25 0 0 28 3L:20926180-20926226 6 fng FBtr0078267 20925889 20926399 ATGTGC 6mer3-8 dme-miR-305-3p 3L - 20926182 20926226 3'utr fng FlyBase G29296.1 ATGTAGCAATACGCTGGACAGATGTGCTTCCTAATGGTATAAGTA 20 20926204 0.828915419 4 20 120 1 1.447158031 0.178571429 0.4 0.571428571 20 0 0 28 3L:20926182-20926226 6 21.5 2397 FBgn0011591 7.356666667 0.46 0.71 2.922519257 46.73913043 30.28169014 -1 -1 -1 0.1 dme-miR-308-3p 8mer-m1 CTGTGATT 3L 20926278 20926285 - 3L_20926278_20926285_- 0.38524978 0.385262914 0.385256347 9.26E-06 fng FBtr0078267 20925889 20926399 3L - 20926265 20926302 3'utr fng FlyBase G38803.1 AAAATCAAATCTCGCCACTGTGATTTAACATTAAGTTT 62 20926278 0.732766937 6 58 473 0.947368421 1.556302501 0.013157895 0.161290323 0.315789474 62 3 1 72 3L:20926265-20926302 8 fng FBtr0078267 20925889 20926399 CTGTGATT 8mer-m1 dme-miR-308-3p 3L - 20926264 20926380 3'utr fng FlyBase G29297.1 AGGTCCCTGGGGATCCTATTTGGCTGTTGCAGGCGCACGTCTGCACTGGGTCGGTTGTGAACCGCTGGGGCAGGCGTCAAAATCAAATCTCGCCACTGTGATTTAACATTAAGTTTA 68 20926278 0.984855607 12 62 501 0.932038835 1.681241237 0.116504854 0.382352941 0.59223301 68 6 1 96 3L:20926264-20926380 8 56 2398 FBgn0011591 7.356666667 0.46 0.71 7.612143181 121.7391304 78.87323944 -7 -7 -7 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 3L 20994476 20994482 - 3L_20994476_20994482_- 0.782342244 0.78291182 0.782627032 0.000402768 skd FBtr0078328|FBtr0112830|FBtr0078329|FBtr0333284 20994129|20994129|20992812|20994129 20995703|20995703|20995703|20995703 3L - 20994463 20994526 3'utr skd FlyBase G38807.1 CACATAGCCAATTTTCTAATAATGGAATACTTAAACGAAAATGTGTACAAATTAATAATAACGA 8 20994485 0.982249178 5 7 57 0.888888889 0.602059991 0.333333333 0.125 0.222222222 8 0 1 8 3L:20994463-20994526 7 skd FBtr0078329|FBtr0333284|FBtr0078328|FBtr0112830 20992812|20994129|20994129|20994129 20995703|20995703|20995703|20995703 GTACAAA 7mer-A1 dme-miR-305-5p 3L - 20994465 20994498 3'utr skd FlyBase G29300.1 ACTTAAACGAAAATGTGTACAAATTAATAATAAC 8 20994485 0.958967905 2 8 41 1 1.041392685 0 0.375 0.545454545 8 0 0 11 3L:20994465-20994498 7 6.5 2399 FBgn0003415 2022.95 23.24 35.72666667 0.003213129 0.279690189 0.181936929 3 3 3 0.1 dme-miR-999-3p 7mer-m8 AGTTAAC 3L 20995128 20995134 - 3L_20995128_20995134_- 0.674510905 0.67451423 0.674512568 2.33E-06 skd FBtr0078328|FBtr0112830|FBtr0078329|FBtr0333284 20994129|20994129|20992812|20994129 20995703|20995703|20995703|20995703 3L - 20995117 20995147 3'utr skd FlyBase G38812.1 AATAGCGGAGTGGAGTTAACGCGAGAAACAT 8 20995132 0.893418574 4 7 21 0.8 0.903089987 0.1 0.25 0.4 8 2 0 8 3L:20995117-20995147 7 skd FBtr0078329|FBtr0333284|FBtr0078328|FBtr0112830 20992812|20994129|20994129|20994129 20995703|20995703|20995703|20995703 AGTTAAC 7mer-m8 dme-miR-999-3p 3L - 20995119 20995155 3'utr skd FlyBase G29304.1 ATATATACAATAGCGGAGTGGAGTTAACGCGAGAAAC 5 20995133 0.948251958 3 5 18 1 0.954242509 0 0.6 0.777777778 5 0 0 9 3L:20995119-20995155 7 6.5 2400 FBgn0003415 2022.95 23.24 35.72666667 0.003213129 0.279690189 0.181936929 -2 -1 -1.5 0.1 dme-miR-304-5p 6mer3-8 TGAGAT 3L 20995209 20995214 - 3L_20995209_20995214_- 0.999580139 0.999535959 0.999558049 3.12E-05 skd FBtr0078328|FBtr0112830|FBtr0078329|FBtr0333284 20994129|20994129|20992812|20994129 20995703|20995703|20995703|20995703 3L - 20995188 20995281 3'utr skd FlyBase G38813.1 TTATATATATACATAGGCTGGCGTTCGATTAGTGTTTAATATTTATAAATATACAAAGGGGAGCGAATGAGATAGCAAAAAGCAAACAACAACA 260 20995214 0.972717916 6 250 412 0.960573477 1.951013539 0.0609319 0.069498069 0.136200717 259 9 2 268 3L:20995188-20995281 6 skd FBtr0078329|FBtr0333284|FBtr0078328|FBtr0112830 20992812|20994129|20994129|20994129 20995703|20995703|20995703|20995703 TGAGAT 6mer3-8 dme-miR-304-5p 3L - 20995187 20995288 3'utr skd FlyBase G29305.1 TTTATTTTTATATATATACATAGGCTGGCGTTCGATTAGTGTTTAATATTTATAAATATACAAAGGGGAGCGAATGAGATAGCAAAAAGCAAACAACAACAA 138 20995214 0.973194287 9 133 269 0.970731707 2.298853076 0.126829268 0.333333333 0.551219512 138 6 0 199 3L:20995187-20995288 6 189.5 2401 FBgn0003415 2022.95 23.24 35.72666667 0.093675078 8.15404475 5.304161224 0 0 0 0.1 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 21074840 21074845 + 3L_21074840_21074845_+ 0.999915495 0.999987852 0.999951673 5.12E-05 siz FBtr0078290|FBtr0301602|FBtr0078289|FBtr0111038 21074675|21074675|21074675|21074675 21075444|21075444|21075444|21075444 3L + 21074808 21074861 3'utr siz FlyBase G31948.1 CACAGCGTACGAGTATATAGTGAATTCTTAATGTTCCTTCGTTCTCTGCTAATA 29 21074839 0.99334016 3 26 322 0.914285714 1.505149978 0.057142857 0.206896552 0.342857143 29 3 0 32 3L:21074808-21074861 6 siz FBtr0078289|FBtr0111038|FBtr0078290|FBtr0301602 21074675|21074675|21074675|21074675 21075444|21075444|21075444|21075444 GTTCCT 6mer2-7 dme-miR-276a-3p 3L + 21074818 21074868 3'utr siz FlyBase G24146.1 GAGTATATAGTGAATTCTTAATGTTCCTTCGTTCTCTGCTAATATTAATGT 17 21074839 0.838481395 4 15 201 0.88 1.041392685 0 0.411764706 0.6 17 2 1 22 3L:21074818-21074868 6 22 2402 FBgn0026179 221.43 5.13 7.85 0.099354198 4.288499025 2.802547771 1 1 1 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3L 21136876 21136882 - 3L_21136876_21136882_- 0.661606692 0.661613619 0.661610156 4.88E-06 Ac78C FBtr0330067|FBtr0301701|FBtr0333358|FBtr0330066|FBtr0305501 21136445|21136445|21136445|21136445|21136445 21137079|21137106|21137106|21137106|21137106 3L - 21136859 21136896 3'utr Ac78C FlyBase G38869.1 TATCTCAGCACAATTCTAGTCGTTAAACTTAAGAACTG 28 21136883 0.862302378 3 27 202 0.96875 1.491361694 0 0.107142857 0.21875 28 1 0 31 3L:21136859-21136896 7 Ac78C FBtr0305501|FBtr0330066|FBtr0333358|FBtr0301701|FBtr0330067 21136445|21136445|21136445|21136445|21136445 21137106|21137106|21137106|21137106|21137079 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3L - 21136861 21136899 3'utr Ac78C FlyBase G29348.1 ATTTATCTCAGCACAATTCTAGTCGTTAAACTTAAGAAC 17 21136883 0.848034139 2 17 130 1 1.414973348 0 0.352941176 0.576923077 17 0 0 26 3L:21136861-21136899 7 22.5 2403 FBgn0024150 386.8566667 7.673333333 11.87 0.058161076 2.932232841 1.895534962 1 1 1 0.1 dme-miR-283-5p 8mer-m1 TGATATTT 3L 21207717 21207724 + 3L_21207717_21207724_+ 0.555593619 0.555593571 0.555593595 0 CG10512 FBtr0078299|FBtr0078297|FBtr0078298|FBtr0078300 21207593|21207593|21207593|21207593 21208092|21208092|21208092|21208092 3L + 21207690 21207828 3'utr CG10512 FlyBase G31999.1 AGTAACACTTTACACTGAGAGAAATATTGATATTTGCAACAGTTAGATTAGATTGCACTGGTGCTGAACTAAAGCTAGTTACATATCTCCATGTTGCACTTAAAACATATTTCTAGTCTCCTAAGAGTCTGTCGTTGCT 339 21207716 0.75351299 38 296 2568 0.883663366 1.950608225 0.222772277 0.16519174 0.29950495 339 44 3 357 3L:21207690-21207828 8 CG10512 FBtr0078300|FBtr0078298|FBtr0078297|FBtr0078299 21207593|21207593|21207593|21207593 21208092|21208092|21208092|21208092 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 21207690 21207830 3'utr CG10512 FlyBase G24183.1 AGTAACACTTTACACTGAGAGAAATATTGATATTTGCAACAGTTAGATTAGATTGCACTGGTGCTGAACTAAAGCTAGTTACATATCTCCATGTTGCACTTAAAACATATTTCTAGTCTCCTAAGAGTCTGTCGTTGCTCC 174 21207716 0.755643385 25 154 1326 0.882142857 2.392696953 0.210714286 0.454022989 0.660714286 174 33 0 247 3L:21207690-21207830 8 141.5 2404 FBgn0037057 268.2233333 18.25666667 27.67 0.527545453 7.750593391 5.113841706 1 1 1 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG 3L 21208038 21208043 + 3L_21208038_21208043_+ 0.538130511 0.647478923 0.592804717 0.077320995 CG10512 FBtr0078299|FBtr0078297|FBtr0078298|FBtr0078300 21207593|21207593|21207593|21207593 21208092|21208092|21208092|21208092 3L + 21207982 21208095 3'utr CG10512 FlyBase G32000.2 AAAACAAAAACTATCTGTTTTAAAATATATTGATTTTGGCACTTTGAGATACCCATGCTGTGTTCAGCAATTTCAAAACTATTAAAATAAACAATATACTCTTCGATAATCAAA 189 21208037 0.839962392 15 187 1232 0.991452991 2.064457989 0.017094017 0.201058201 0.354700855 189 1 1 232 3L:21207982-21208095 6 CG10512 FBtr0078300|FBtr0078298|FBtr0078297|FBtr0078299 21207593|21207593|21207593|21207593 21208092|21208092|21208092|21208092 GCTGTG 6mer2-7 dme-miR-1008-3p 3L + 21208015 21208088 3'utr CG10512 FlyBase G24185.1 TTTTGGCACTTTGAGATACCCATGCTGTGTTCAGCAATTTCAAAACTATTAAAATAAACAATATACTCTTCGAT 165 21208037 0.853424493 10 157 1084 0.931034483 2.385606274 0.007662835 0.406060606 0.624521073 165 18 0 243 3L:21208015-21208088 6 167 2405 FBgn0037057 268.2233333 18.25666667 27.67 0.622615482 9.147343436 6.03541742 1 1 1 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 3L 21219029 21219034 + 3L_21219029_21219034_+ 0.999828692 0.997985444 0.998907068 0.00130341 Ilk FBtr0078305 21218943 21219240 3L + 21218965 21219172 3'utr Ilk FlyBase G32011.1 AAATGCCAAGCCAAAATGTGCCTTGAGAAACCTTAGATTTGCCAACTAATTGTAATTACTACTTTGTGTTACCTTTGTCTAACTGAGCCTAACCGAAAACCGTACCGAAATGGCAAAGCAAGTGCAACTGCTCTGTCTAGAGTTTATGTTTCTGTGTCTCACTGTTCTCTACTTATGATTTTCCGTCGATGTTTAGTGCGGGTGCTCG 123 21219040 0.948285788 29 115 1086 0.966887417 2.164352856 0.152317881 0.203252033 0.350993377 123 5 0 146 3L:21218965-21219172 6 Ilk FBtr0078305 21218943 21219240 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 21218972 21219085 3'utr Ilk FlyBase G24193.1 AAGCCAAAATGTGCCTTGAGAAACCTTAGATTTGCCAACTAATTGTAATTACTACTTTGTGTTACCTTTGTCTAACTGAGCCTAACCGAAAACCGTACCGAAATGGCAAAGCAA 52 21219040 0.988980554 13 48 452 0.956521739 1.944482672 0.086956522 0.461538462 0.695652174 52 4 0 88 3L:21218972-21219085 6 47.5 2406 FBgn0028427 517.3333333 43.88 67.08 0.09181701 1.082497721 0.70810972 -11 -11 -11 0.1 dme-miR-184-3p 6mer2-7 CCGTCC 3L 2126105 2126110 - 3L_2126105_2126110_- 0.999965295 0.999963536 0.999964415 1.27E-06 zormin FBtr0332117 2117464 2126635 3L - 2126073 2126129 5'utr zormin FlyBase G33634.1 AACAGCCACAGGCCACATCCCGTCCGACCATGTACTACAATGCTGTTGCTGGAGCTC 141 2126112 0.96916555 3 139 307 0.987878788 2.212187604 0.012121212 0.141843972 0.266666667 141 2 0 163 3L:2126073-2126129 6 zormin FBtr0332117 2117464 2126635 CCGTCC 6mer2-7 dme-miR-184-3p 3L - 2126071 2126133 5'utr zormin FlyBase G25434.1 CAGAAACAGCCACAGGCCACATCCCGTCCGACCATGTACTACAATGCTGTTGCTGGAGCTCCG 48 2126112 0.967881844 3 48 80 1 1.886490725 0.051948052 0.479166667 0.675324675 48 0 0 77 3L:2126071-2126133 6 92.5 2407 FBgn0052311 753.3466667 9.526666667 14.67333333 0.122785437 9.709587124 6.303952749 2 2 2 0.1 dme-miR-283-5p 6mer3-8 TGATAT 3L 21271250 21271255 - 3L_21271250_21271255_- 0.983943202 0.988728415 0.986335809 0.003383647 AcCoAS FBtr0333126|FBtr0078413|FBtr0078414 21271207|21270720|21271207 21271704|21271704|21271704 3L - 21271216 21271273 3'utr AcCoAS FlyBase G38884.1 ATGTATTTTTAGTAGAATTGATATGAGACAAAATATATACACGATTCCAATTGTCGCC 58 21271250 0.897842755 7 58 344 1 1.838849091 0.086956522 0.172413793 0.304347826 58 0 0 69 3L:21271216-21271273 6 AcCoAS FBtr0078413|FBtr0078414|FBtr0333126 21270720|21271207|21271207 21271704|21271704|21271704 TGATAT 6mer3-8 dme-miR-283-5p 3L - 21271208 21271266 3'utr AcCoAS FlyBase G29357.1 TTTAGTAGAATTGATATGAGACAAAATATATACACGATTCCAATTGTCGCCACAATTTA 40 21271250 0.968921785 6 39 218 0.982142857 1.740362689 0.089285714 0.275 0.482142857 40 1 0 55 3L:21271208-21271266 6 45.5 2408 FBgn0012034 1039.716667 45.38666667 69.30333333 0.043761922 1.002497062 0.656534077 -5 -5 -5 0.1 dme-miR-307a-3p 7mer-A1 GTTGTGA 3L 21271302 21271308 - 3L_21271302_21271308_- 0.81703075 0.817003091 0.817016921 1.96E-05 AcCoAS FBtr0333126|FBtr0078413|FBtr0078414 21271207|21270720|21271207 21271704|21271704|21271704 3L - 21271274 21271342 3'utr AcCoAS FlyBase G38885.1 TCGTTGTAGTCGTAGTTTAAGTTCTCGCTAATTCGTTGTGATACAAATTTAATTATATCTTACTTATGT 255 21271309 0.736483011 18 230 2338 0.903846154 1.274157849 0.480769231 0.173228346 0.326923077 254 16 14 282 3L:21271274-21271342 7 AcCoAS FBtr0078413|FBtr0078414|FBtr0333126 21270720|21271207|21271207 21271704|21271704|21271704 GTTGTGA 7mer-A1 dme-miR-307a-3p 3L - 21271270 21271341 3'utr AcCoAS FlyBase G29358.1 CGTTGTAGTCGTAGTTTAAGTTCTCGCTAATTCGTTGTGATACAAATTTAATTATATCTTACTTATGTATGT 154 21271308 0.691948948 16 136 1388 0.887029289 1.627365857 0.464435146 0.376623377 0.59832636 154 23 4 212 3L:21271270-21271341 7 191.5 2409 FBgn0012034 1039.716667 45.38666667 69.30333333 0.184184794 4.219300823 2.763214853 1 0 0.5 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 3L 21280652 21280657 - 3L_21280652_21280657_- 1 1 1 0 ppl FBtr0078412 21280489 21280688 3L - 21280624 21280742 stop_codon ppl FlyBase G38901.1 CTTATGACCGAGGATCAGTACAAAGCCTTCCTGAGCAGCAGTGGGGATCACTAGAACCAGCAGCTAATCCTAACCCTAAAGCATCTTGACTGTAGCCTTTAAAACGAGTAATTGTTAGC 33 21280650 0.971040779 9 31 183 0.918918919 1.054357662 0.054054054 0.090909091 0.189189189 33 1 2 34 3L:21280624-21280742 6 ppl FBtr0078412 21280489 21280688 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 21280638 21280670 3'utr ppl FlyBase G29373.1 ACCCTAAAGCATCTTGACTGTAGCCTTTAAAAC 15 21280656 0.634234328 3 15 92 1 1.380211242 0 0.466666667 0.666666667 15 0 0 24 3L:21280638-21280670 6 17 2410 FBgn0027945 285 39.5 59.95666667 0.059649123 0.430379747 0.283538111 -7 -1 -4 0.1 dme-bantam-3p 6mer2-7 GATCTC 3L 21289629 21289634 + 3L_21289629_21289634_+ 0.591755946 0.724916339 0.658336142 0.094158622 pzg FBtr0078336|FBtr0331793 21289486|21289486 21290310|21290041 3L + 21289609 21289788 3'utr pzg FlyBase G32033.1 TTAGCTGTGGGCACGCTCAAGATCTCTGGAGGACTTTTGCACACCCCAATTTGAAACCCACTCCCTGACACCCACAACCGAACCAACTTTACAGACAACTGAACACGAAGACAGAAAAATACACACACGAACCTTTTCAATATATATTTACATTTAGTATATGTATTAAACACTCCAGTA 241 21289635 0.94936257 20 235 1005 0.986440678 2.463892989 0.318644068 0.191666667 0.342372881 240 4 0 291 3L:21289609-21289788 6 pzg FBtr0078336|FBtr0331793 21289486|21289486 21290310|21290041 GATCTC 6mer2-7 dme-bantam-3p 3L + 21289608 21289694 3'utr pzg FlyBase G24211.1 TTTAGCTGTGGGCACGCTCAAGATCTCTGGAGGACTTTTGCACACCCCAATTTGAAACCCACTCCCTGACACCCACAACCGAACCAA 174 21289635 0.970078749 8 171 741 0.98540146 2.130333768 0.354014599 0.396551724 0.616788321 174 3 1 270 3L:21289608-21289694 6 176 2411 FBgn0259785 1717.95 53.61666667 82.12666667 0.102447685 3.282561393 2.14303109 -6 -6 -6 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 21302523 21302528 - 3L_21302523_21302528_- 0.542348662 0.730943337 0.636645999 0.133356521 CG11309 FBtr0078407|FBtr0078407|FBtr0078407|FBtr0331798|FBtr0331798|FBtr0331798|FBtr0321283|FBtr0321283|FBtr0321283|FBtr0321282|FBtr0321282|FBtr0321282|FBtr0345883|FBtr0345883|FBtr0345883|FBtr0078406|FBtr0078406|FBtr0078406 21302274|21302274|21302274|21302478|21302478|21302478|21302274|21302274|21302274|21302478|21302478|21302478|21301783|21301783|21301783|21302478|21302478|21302478 21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604 3L - 21302497 21302563 3'utr CG11309 FlyBase G38905.1 ATTGTACAGGTTTTTATACTTAATTGTTTATGCTATGTGATCGCGGCAGAGGACTCGGCTCTGCTAT 16 21302550 0.81657032 10 14 139 0.842105263 1.204119983 0.210526316 0.1875 0.315789474 16 3 0 16 3L:21302497-21302563 6 CG11309 FBtr0321282|FBtr0321282|FBtr0321282|FBtr0321283|FBtr0321283|FBtr0321283|FBtr0331798|FBtr0331798|FBtr0331798|FBtr0078407|FBtr0078407|FBtr0078407|FBtr0078406|FBtr0078406|FBtr0078406|FBtr0345883|FBtr0345883|FBtr0345883 21302478|21302478|21302478|21302274|21302274|21302274|21302478|21302478|21302478|21302274|21302274|21302274|21302478|21302478|21302478|21301783|21301783|21301783 21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 21302512 21302550 3'utr CG11309 FlyBase G29377.1 TTATACTTAATTGTTTATGCTATGTGATCGCGGCAGAGG 8 21302534 0.980490356 5 7 58 0.9 1.255272505 0.8 0.625 0.85 8 2 0 18 3L:21302512-21302550 6 8.5 2412 FBgn0037070 162.24 12.80666667 19.53 0.052391519 0.663716814 0.435227855 22 6 14 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 21306029 21306034 + 3L_21306029_21306034_+ 0.999972611 0.999933471 0.999953041 2.76E-05 CG7632 FBtr0321281|FBtr0078339 21305971|21305971 21306197|21306197 3L + 21305972 21306087 3'utr CG7632 FlyBase G32041.1 AGACCGCCTTAACATAGACCTCGACATATAGACCCGTGTACAAACTAGCGGATTCGTGTACCTTACTCCTAATGTTTAATTTAACCCAACGCAGATTGATGATATTTACTGGATAT 78 21306028 0.934855111 8 77 531 0.988764045 1.944482672 0.02247191 0.128205128 0.235955056 78 1 0 88 3L:21305972-21306087 6 CG7632 FBtr0321281|FBtr0078339 21305971|21305971 21306197|21306197 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 21305971 21306093 stop_codon CG7632 FlyBase G24218.1 GAGACCGCCTTAACATAGACCTCGACATATAGACCCGTGTACAAACTAGCGGATTCGTGTACCTTACTCCTAATGTTTAATTTAACCCAACGCAGATTGATGATATTTACTGGATATTATATG 55 21306028 0.98199323 9 54 402 1 1.908485019 0.086419753 0.363636364 0.567901235 55 0 0 81 3L:21305971-21306093 6 43 2413 FBgn0037071 107.9566667 9.143333333 13.89 0.398307963 4.702880058 3.09575234 1 1 1 0.1 dme-miR-305-5p 7mer-m1 GTACAAT 3L 21306162 21306168 + 3L_21306162_21306168_+ 0.765345371 0.765478393 0.765411882 9.40E-05 CG7632 FBtr0321281|FBtr0078339 21305971|21305971 21306197|21306197 3L + 21306129 21306192 3'utr CG7632 FlyBase G32042.1 TGGAAAATTGGTTGCTTCTATTTAATTTATTATGTACAATCAATACCGGCAATAACATTAATGT 8 21306171 0.922158544 4 8 58 1 0.954242509 0 0.125 0.222222222 8 0 0 9 3L:21306129-21306192 7 CG7632 FBtr0321281|FBtr0078339 21305971|21305971 21306197|21306197 GTACAAT 7mer-m1 dme-miR-305-5p 3L + 21306125 21306194 3'utr CG7632 FlyBase G24219.1 ACATTGGAAAATTGGTTGCTTCTATTTAATTTATTATGTACAATCAATACCGGCAATAACATTAATGTTA 14 21306137 0.89570349 6 13 110 0.933333333 0.84509804 0 0.071428571 0.133333333 14 0 1 14 3L:21306125-21306194 7 4.5 2414 FBgn0037071 107.9566667 9.143333333 13.89 0.041683391 0.492161867 0.323974082 -9 25 8 0.1 dme-miR-965-3p 8mer-A1 TACGCTTA 3L 21315830 21315837 - 3L_21315830_21315837_- 0.625356778 0.625357243 0.62535701 2.83E-07 Pc FBtr0078405 21306136 21316423 3L - 21315800 21315873 5'utr Pc FlyBase G38913.1 AAGAAAACTCCATGCGAAACCGAAGCAATTGTTGATTACGCTTACAAATATATACAATAGAAGATGCATATATT 37 21315838 0.984513143 5 36 284 0.977777778 1.643452676 0.244444444 0.189189189 0.333333333 37 1 0 44 3L:21315800-21315873 8 Pc FBtr0078405 21306136 21316423 TACGCTTA 8mer-A1 dme-miR-965-3p 3L - 21315810 21315860 5'utr Pc FlyBase G29383.1 GCGAAACCGAAGCAATTGTTGATTACGCTTACAAATATATACAATAGAAGA 20 21315838 0.984584544 2 20 166 1 1.505149978 0.3125 0.3 0.5625 20 0 0 32 3L:21315810-21315860 8 27 2415 FBgn0003042 426.7466667 21.12 32.45666667 0.063269387 1.278409091 0.831878402 1 1 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 21316355 21316360 - 3L_21316355_21316360_- 0.740884171 0.999999997 0.870442084 0.183222539 Pc FBtr0078405 21306136 21316423 3L - 21316314 21316389 5'utr Pc FlyBase G38915.1 GGAAAACTGATACAATTGTAAATAGACAAACCAAAATGCGAGAAAGTTGAGAGAAGAATTATGCAGAGAAATCCAC 16 21316353 0.948324108 6 14 37 0.944444444 1.230448921 0.277777778 0.125 0.222222222 16 1 0 17 3L:21316314-21316389 6 Pc FBtr0078405 21306136 21316423 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 21316297 21316366 5'utr Pc FlyBase G29386.1 AGACAAACCAAAATGCGAGAAAGTTGAGAGAAGAATTATGCAGAGAAATCCACACTAAATGTTGCTAAGC 10 21316353 0.910485537 6 7 22 0.764705882 0.812913357 0.294117647 0.6 0.764705882 10 3 1 13 3L:21316297-21316366 6 7.5 2416 FBgn0003042 426.7466667 21.12 32.45666667 0.01757483 0.355113636 0.231077334 -7 -7 -7 0.1 dme-miR-995-5p 7mer-m1 ATTCGGG 3L 21338064 21338070 + 3L_21338064_21338070_+ 0.812239268 0.60294826 0.707593764 0.147991085 CG7338 FBtr0078342 21337940 21338232 3L + 21338031 21338089 3'utr CG7338 FlyBase G32052.1 AACCTCTAAAAGTATGAAACCTACGAAGTGTCCATTCGGGAAATGTCACCCGAAAAGTA 13 21338075 0.959041307 4 12 58 0.9375 1.176091259 0.0625 0.230769231 0.375 13 1 0 15 3L:21338031-21338089 7 CG7338 FBtr0078342 21337940 21338232 ATTCGGG 7mer-m1 dme-miR-995-5p 3L + 21338048 21338088 3'utr CG7338 FlyBase G24228.1 AACCTACGAAGTGTCCATTCGGGAAATGTCACCCGAAAAGT 10 21338076 0.863105 3 10 32 1 1.230448921 0.235294118 0.4 0.647058824 10 0 0 17 3L:21338048-21338088 7 11.5 2417 FBgn0037073 698.1166667 29.76666667 45.67333333 0.016472891 0.386338186 0.25178806 -11 -12 -11.5 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 3L 21423499 21423505 + 3L_21423499_21423505_+ 0.620153118 0.620152091 0.620152604 7.07E-07 rgn FBtr0333386|FBtr0078346|FBtr0309230|FBtr0333385 21423268|21423268|21423268|21423268 21424061|21424416|21424061|21424061 3L + 21423465 21423544 3'utr rgn FlyBase G32060.1 ATCGCTGCGAAGCAGATTTTGTCGGTTAATTAATTGCATTTCGATCGAGCAGGAAACCCAATCTCCATGCGCTTCGCTAG 9 21423498 0.979194534 3 9 63 1 1 0.6 0.111111111 0.2 9 0 0 10 3L:21423465-21423544 7 rgn FBtr0309230|FBtr0333385|FBtr0333386|FBtr0078346 21423268|21423268|21423268|21423268 21424061|21424061|21424061|21424416 TGCATTT 7mer-m8 dme-miR-277-3p 3L + 21423487 21423549 3'utr rgn FlyBase G24234.1 CGGTTAATTAATTGCATTTCGATCGAGCAGGAAACCCAATCTCCATGCGCTTCGCTAGCTATT 9 21423498 0.883239931 2 9 68 1 1.146128036 0.285714286 0.555555556 0.714285714 9 0 0 14 3L:21423487-21423549 7 5.5 2418 FBgn0261258 1418.933333 41.47666667 64.17666667 0.003876151 0.132604677 0.08570093 1 1 1 0.1 dme-miR-965-3p 8mer-A1 TACGCTTA 3L 21436804 21436811 + 3L_21436804_21436811_+ 0.625364803 0.625364919 0.625364861 7.07E-08 Aef1 FBtr0330156|FBtr0078348|FBtr0078350|FBtr0078349 21436646|21436208|21436208|21436208 21437491|21438639|21437491|21437491 3L + 21436763 21436827 3'utr Aef1 FlyBase G32068.1 AGGAGCAGCGATCGAGCCAGAAGTGAGCCATGTTTGGTGTGTACGCTTACGTTGTTGTTAGTTGT 11 21436803 0.99120693 4 10 108 1 1.079181246 0.25 0.090909091 0.166666667 11 0 0 12 3L:21436763-21436827 8 Aef1 FBtr0330156|FBtr0078348|FBtr0078350|FBtr0078349 21436646|21436208|21436208|21436208 21437491|21438639|21437491|21437491 TACGCTTA 8mer-A1 dme-miR-965-3p 3L + 21436741 21436827 3'utr Aef1 FlyBase G24241.1 GTGGAAATTCAGGAGCAGAAAGAGGAGCAGCGATCGAGCCAGAAGTGAGCCATGTTTGGTGTGTACGCTTACGTTGTTGTTAGTTGT 10 21436786 0.99966469 6 9 63 0.909090909 0.698970004 0.454545455 0.1 0.181818182 10 0 1 10 3L:21436741-21436827 8 6.5 2419 FBgn0005694 574.74 23.47666667 36.08 0.011309462 0.276870652 0.180155211 1 18 9.5 0.1 dme-miR-1012-3p 7mer-A1 TGACTAA 3L 21436872 21436878 + 3L_21436872_21436878_+ 0.823343827 0.823323264 0.823333546 1.45E-05 Aef1 FBtr0330156|FBtr0078348|FBtr0078350|FBtr0078349 21436646|21436208|21436208|21436208 21437491|21438639|21437491|21437491 3L + 21436850 21436890 3'utr Aef1 FlyBase G32069.1 TTGTTGTTAAGGTTTAAATGTGTGACTAAGAACTTACCAAG 6 21436868 0.970241029 3 5 44 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 3L:21436850-21436890 7 Aef1 FBtr0330156|FBtr0078348|FBtr0078350|FBtr0078349 21436646|21436208|21436208|21436208 21437491|21438639|21437491|21437491 TGACTAA 7mer-A1 dme-miR-1012-3p 3L + 21436831 21436903 3'utr Aef1 FlyBase G24242.1 ATTGTAGCGAACATTGTTGTTGTTGTTAAGGTTTAAATGTGTGACTAAGAACTTACCAAGATGATTGTATAGC 11 21436870 0.977204163 7 11 80 1 1.342422681 0.363636364 0.545454545 0.772727273 11 0 0 22 3L:21436831-21436903 7 6 2420 FBgn0005694 574.74 23.47666667 36.08 0.010439503 0.255572909 0.166297118 4 2 3 0.1 dme-miR-988-3p 6mer2-7 CAAGGG 3L 21437378 21437383 + 3L_21437378_21437383_+ 0.999997457 0.999995801 0.999996629 1.20E-06 Aef1 FBtr0330156|FBtr0078348|FBtr0078350|FBtr0078349 21436646|21436208|21436208|21436208 21437491|21438639|21437491|21437491 3L + 21437338 21437410 3'utr Aef1 FlyBase G32070.1 GTTGTACAACTCAAAGTTGGTGACGTTTTTCGCCATCTTGCAAGGGCGTGTTTTAGTCTGGGCTAACACAAAT 15 21437376 0.982115308 7 14 106 1 1.230448921 0.352941176 0.133333333 0.235294118 15 0 0 17 3L:21437338-21437410 6 Aef1 FBtr0330156|FBtr0078348|FBtr0078350|FBtr0078349 21436646|21436208|21436208|21436208 21437491|21438639|21437491|21437491 CAAGGG 6mer2-7 dme-miR-988-3p 3L + 21437342 21437422 3'utr Aef1 FlyBase G24243.1 TACAACTCAAAGTTGGTGACGTTTTTCGCCATCTTGCAAGGGCGTGTTTTAGTCTGGGCTAACACAAATACAATTTGTTTA 17 21437376 0.959326012 7 17 112 1 1.491361694 0.483870968 0.411764706 0.677419355 17 0 0 31 3L:21437342-21437422 6 11.5 2421 FBgn0005694 574.74 23.47666667 36.08 0.020009048 0.489848076 0.318736142 2 2 2 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 3L 21437764 21437770 + 3L_21437764_21437770_+ 0.782911527 0.782911821 0.782911674 2.12E-07 Aef1 FBtr0078348 21436208 21438639 3L + 21437747 21437806 3'utr Aef1 FlyBase G32073.1 GTAAAGCAACAAGTTCTGTACAAAGCCCAACTCCAATTTGTATGTATAAAGCGAAAGCGA 8 21437761 0.940178436 5 8 35 1 0.903089987 0 0 0 8 0 0 8 3L:21437747-21437806 7 Aef1 FBtr0078348 21436208 21438639 GTACAAA 7mer-A1 dme-miR-305-5p 3L + 21437751 21437786 3'utr Aef1 FlyBase G24245.1 AGCAACAAGTTCTGTACAAAGCCCAACTCCAATTTG 6 21437762 0.758988063 4 5 23 0.857142857 0.77815125 0.142857143 0.166666667 0.285714286 6 1 0 6 3L:21437751-21437786 7 6 2422 FBgn0005694 574.74 23.47666667 36.08 0.010439503 0.255572909 0.166297118 3 2 2.5 0.1 dme-miR-1007-3p 6mer3-8 TGAGCT 3L 21438978 21438983 - 3L_21438978_21438983_- 0.999994014 0.999998686 0.99999635 3.32E-06 CG5664 FBtr0331822 21438626 21439731 3L - 21438965 21439002 3'utr CG5664 FlyBase G38953.2 ACCTATCTGAACAACTTTCTGAGCTATGAAGAGTCCAT 8 21438983 0.771730533 2 7 50 0.888888889 0.602059991 0.111111111 0.125 0.222222222 8 0 1 8 3L:21438965-21439002 6 CG5664 FBtr0331822 21438626 21439731 TGAGCT 6mer3-8 dme-miR-1007-3p 3L - 21438935 21439002 3'utr CG5664 FlyBase G29421.1 ACCTATCTGAACAACTTTCTGAGCTATGAAGAGTCCATGTCTCCAGTAGACTCTGCGTCTTCCTCCTT 7 21438983 0.979021754 3 7 56 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3L:21438935-21439002 6 6.5 2423 FBgn0037082 240.3466667 11.07666667 16.92666667 0.027044269 0.586819139 0.384009453 0 0 0 0.1 dme-miR-282-5p 6mer2-7 GAGGCT 3L 21439311 21439316 - 3L_21439311_21439316_- 1 0.999999993 0.999999997 0 CG5664 FBtr0331822 21438626 21439731 3L - 21439292 21439388 3'utr CG5664 FlyBase G38954.1 AGTTGTCGCGTGAGGATTACCTAGCATTACTCCTTAGCGCCTTAAAAGACTATGACAAGTGGTTAAATCTTGGAGGCTTTTGGAAGTACCTAATGAG 16 21439318 0.987719868 7 15 129 0.952380952 1.301029996 0.285714286 0.3125 0.476190476 16 1 0 20 3L:21439292-21439388 6 CG5664 FBtr0331822 21438626 21439731 GAGGCT 6mer2-7 dme-miR-282-5p 3L - 21439300 21439332 3'utr CG5664 FlyBase G29422.1 AAGTGGTTAAATCTTGGAGGCTTTTGGAAGTAC 7 21439318 0.770065742 3 7 61 1 1.079181246 0.083333333 0.428571429 0.666666667 7 0 0 12 3L:21439300-21439332 6 9 2424 FBgn0037082 240.3466667 11.07666667 16.92666667 0.037445911 0.812518808 0.531705396 2 2 2 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3L 21439663 21439670 - 3L_21439663_21439670_- 0.647568502 0.60272182 0.625145161 0.031711406 CG5664 FBtr0331822|FBtr0331822|FBtr0331822 21438626|21438626|21438626 21439731|21439731|21439731 3L - 21439608 21439685 3'utr CG5664 FlyBase G38955.1 AGTACGAGGATAATGCTGTGATATATCCTAGTATGGGACCCCAAACCCATCTGCTCATCGAAGACTTCTTCAAGATTT 17 21439672 0.980565538 8 16 114 0.947368421 1.255272505 0.263157895 0.117647059 0.210526316 17 1 0 18 3L:21439608-21439685 8 CG5664 FBtr0331822|FBtr0331822|FBtr0331822 21438626|21438626|21438626 21439731|21439731|21439731 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 21439646 21439690 3'utr CG5664 FlyBase G29423.1 GCTAAAGTACGAGGATAATGCTGTGATATATCCTAGTATGGGACC 10 21439673 0.986967979 3 8 73 0.8 1.079181246 0.4 0.3 0.533333333 10 3 0 12 3L:21439646-21439690 8 11.5 2425 FBgn0037082 240.3466667 11.07666667 16.92666667 0.047847554 1.038218477 0.679401339 2 3 2.5 0.1 dme-miR-307a-3p 7mer-A1 GTTGTGA 3L 21447696 21447702 + 3L_21447696_21447702_+ 0.823349559 0.823349484 0.823349522 7.07E-08 Syx7 FBtr0078351|FBtr0078352 21447650|21447650 21448128|21448128 3L + 21447645 21447719 stop_codon Syx7 FlyBase G32078.1 GAATTAGAGCCTTCCGGCATCTCCGAATGATTCAAACCAAACTAGTAAATTGTTGTGAAAAGACAAGAGTTGCCG 9 21447695 0.977275824 7 8 53 0.818181818 0.954242509 0.181818182 0.222222222 0.363636364 9 2 0 9 3L:21447645-21447719 7 Syx7 FBtr0078351|FBtr0078352 21447650|21447650 21448128|21448128 GTTGTGA 7mer-A1 dme-miR-307a-3p 3L + 21447669 21447720 3'utr Syx7 FlyBase G24253.1 GAATGATTCAAACCAAACTAGTAAATTGTTGTGAAAAGACAAGAGTTGCCGC 11 21447696 0.971281813 5 9 55 0.944444444 1.230448921 0.055555556 0.636363636 0.777777778 11 1 0 17 3L:21447669-21447720 7 8 2426 FBgn0086377 809 63.10333333 96.81333333 0.009888752 0.126776187 0.082633246 1 0 0.5 0.1 dme-miR-980-5p 7mer-A1 AAAAACA 3L 21447899 21447905 + 3L_21447899_21447905_+ 0.7828394 0.461872252 0.622355826 0.226958013 Syx7 FBtr0078351|FBtr0078352 21447650|21447650 21448128|21448128 3L + 21447734 21447998 3'utr Syx7 FlyBase G32079.1 AACCCCGTAATTCCCCACCCAATCCTTTGGACCTTAGGCGAGATTATGGCTTTAATCCTTAATCCAACTTCCAATACTGGCTGAAATCGAAAACTGCGACTCGTAGACGAAGATATAGTGTTTTGAGGAGTATTCACCGGCACGTGCATCTGTTATATTTGCTTTAAAAACAATTTTATATTTTATGTGTACTACTTTTATTATTACGCACCCTGTATATTGATTATTAGTATTGATTAACAACTGTTGGCTTCAAATTCTAATT 178 21447882 0.989020977 39 171 1650 0.97716895 2.330413773 0.150684932 0.191011236 0.342465753 178 5 0 214 3L:21447734-21447998 7 Syx7 FBtr0078351|FBtr0078352 21447650|21447650 21448128|21448128 AAAAACA 7mer-A1 dme-miR-980-5p 3L + 21447793 21447944 3'utr Syx7 FlyBase G24254.2 TAATCCAACTTCCAATACTGGCTGAAATCGAAAACTGCGACTCGTAGACGAAGATATAGTGTTTTGAGGAGTATTCACCGGCACGTGCATCTGTTATATTTGCTTTAAAAACAATTTTATATTTTATGTGTACTACTTTTATTATTACGCAC 103 21447882 0.868991852 22 95 944 0.918367347 2.130333768 0.204081633 0.339805825 0.537414966 103 12 0 135 3L:21447793-21447944 7 36.5 2427 FBgn0086377 809 63.10333333 96.81333333 0.045117429 0.578416354 0.377014185 17 17 17 0.1 dme-miR-305-5p 8mer-A1 AGTACAAA 3L 21497809 21497816 - 3L_21497809_21497816_- 0.605652535 0.605649171 0.605650853 2.33E-06 Glg1 FBtr0078388|FBtr0332717 21497547|21497547 21498214|21498214 3L - 21497801 21497838 3'utr Glg1 FlyBase G38971.1 TACGGCAGAGCGCCTAGTTTTGAGTACAAAAGTTAAGT 40 21497819 0.944767221 5 40 264 1 1.643452676 0.25 0.1 0.181818182 40 0 0 44 3L:21497801-21497838 8 Glg1 FBtr0078388|FBtr0332717 21497547|21497547 21498214|21498214 AGTACAAA 8mer-A1 dme-miR-305-5p 3L - 21497805 21497837 3'utr Glg1 FlyBase G29436.1 ACGGCAGAGCGCCTAGTTTTGAGTACAAAAGTT 12 21497819 0.961536889 3 12 80 1 1.278753601 0.210526316 0.5 0.684210526 12 0 0 19 3L:21497805-21497837 8 26 2428 FBgn0264561 1367.6 37.22 56.66666667 0.019011407 0.698549167 0.458823529 3 3 3 0.1 dme-miR-1003-3p 6mer2-7 TGTGAG 3L 21498065 21498070 - 3L_21498065_21498070_- 0.995211663 0.991162504 0.993187083 0.002863217 Glg1 FBtr0078388|FBtr0332717 21497547|21497547 21498214|21498214 3L - 21498016 21498100 3'utr Glg1 FlyBase G38973.1 CACTCAACCCTGTCTGCCTTTCGATATTTGTGTGAGCAATTTGTGGCTTAGTCGTTTGTAAGACCAAAAAATACGCGAGAAAGGA 22 21498059 0.985820918 11 21 163 0.965517241 1.447158031 0.448275862 0.227272727 0.413793103 22 1 0 28 3L:21498016-21498100 6 Glg1 FBtr0078388|FBtr0332717 21497547|21497547 21498214|21498214 TGTGAG 6mer2-7 dme-miR-1003-3p 3L - 21498011 21498100 3'utr Glg1 FlyBase G29438.1 CACTCAACCCTGTCTGCCTTTCGATATTTGTGTGAGCAATTTGTGGCTTAGTCGTTTGTAAGACCAAAAAATACGCGAGAAAGGAGAACA 15 21498059 0.984079317 8 14 101 0.952380952 1 0.285714286 0.4 0.571428571 15 0 1 20 3L:21498011-21498100 6 8 2429 FBgn0264561 1367.6 37.22 56.66666667 0.005849664 0.214938205 0.141176471 -11 -11 -11 0.1 dme-miR-14-3p 6mer2-7 AGACTG 3L 21498199 21498204 - 3L_21498199_21498204_- 0.999999581 0.999999992 0.999999787 2.83E-07 Glg1 FBtr0078388|FBtr0332717 21497547|21497547 21498214|21498214 3L - 21498137 21498276 stop_codon Glg1 FlyBase G38974.1 TCCTCACCGGCATCTTCCTGGGACGGGCCACCAAACGGGCAATGGGCTTAAAGAATAAATAATTGAAATATTAGACTGTAGTGGCACTGTGTAGGCGGAGTGTGCATGTTTGTGAGCTTGCTGATTTCCATTTCGGCCCA 546 21498206 0.989258442 20 532 3875 0.968553459 1.886490725 0.11163522 0.137362637 0.259433962 546 13 7 616 3L:21498137-21498276 6 Glg1 FBtr0078388|FBtr0332717 21497547|21497547 21498214|21498214 AGACTG 6mer2-7 dme-miR-14-3p 3L - 21498151 21498257 stop_codon Glg1 FlyBase G29439.1 GGGACGGGCCACCAAACGGGCAATGGGCTTAAAGAATAAATAATTGAAATATTAGACTGTAGTGGCACTGTGTAGGCGGAGTGTGCATGTTTGTGAGCTTGCTGATT 269 21498206 0.980399184 12 249 1763 0.941860465 1.653212514 0.11627907 0.423791822 0.639534884 269 17 8 405 3L:21498151-21498257 6 356.5 2430 FBgn0264561 1367.6 37.22 56.66666667 0.260675636 9.578183772 6.291176471 2 2 2 0.1 dme-miR-305-3p 7mer-m8 ATGTGCC 3L 21511831 21511837 + 3L_21511831_21511837_+ 0.674512408 0.674507618 0.674510013 3.39E-06 M6 FBtr0339793 21511707 21512749 3L + 21511781 21511865 3'utr M6 FlyBase G32087.1 TGGCCACTCTGTCCACCCTTTTGGTGCTGCTCAGTCTGGTCCACTACCTGATGTGCCTGTCTGCTAACTACGCCCACATTCGGGA 23 21511832 0.985853263 5 22 171 0.961538462 1.397940009 0.269230769 0.086956522 0.192307692 23 1 0 25 3L:21511781-21511865 7 M6 FBtr0339793 21511707 21512749 ATGTGCC 7mer-m8 dme-miR-305-3p 3L + 21511808 21511847 3'utr M6 FlyBase G24260.1 TGCTCAGTCTGGTCCACTACCTGATGTGCCTGTCTGCTAA 7 21511832 0.811613588 2 7 59 1 1.113943352 0 0.857142857 0.923076923 7 0 0 13 3L:21511808-21511847 7 12.5 2431 FBgn0037092 152.03 9.373333333 14.24333333 0.082220614 1.333570413 0.877603557 -1 -1 -1 0.1 dme-miR-184-3p 8mer-A1 TCCGTCCA 3L 21512254 21512261 + 3L_21512254_21512261_+ 0.526332887 0.509200365 0.517766626 0.012114507 M6 FBtr0332712|FBtr0332713|FBtr0078356|FBtr0332714|FBtr0332715|FBtr0339793 21511946|21511946|21511946|21511946|21511946|21511707 21512749|21512749|21512749|21512749|21512749|21512749 3L + 21512185 21512287 3'utr M6 FlyBase G32088.1 ACTGCCAAATCAAATGTTACACTGAAATTATGCTTCTTATCTACTGTACTGTTCCACTGACTTTTTTCTTCCGTCCATTGACTTAAGTTAGTTTACATTTATT 988 21512253 0.845403067 29 968 12105 0.98245614 2.572096768 0.129824561 0.126518219 0.242982456 988 18 2 1120 3L:21512185-21512287 8 M6 FBtr0332712|FBtr0332713|FBtr0332715|FBtr0339793|FBtr0078356|FBtr0332714 21511946|21511946|21511946|21511707|21511946|21511946 21512749|21512749|21512749|21512749|21512749|21512749 TCCGTCCA 8mer-A1 dme-miR-184-3p 3L + 21512186 21512287 3'utr M6 FlyBase G24263.1 CTGCCAAATCAAATGTTACACTGAAATTATGCTTCTTATCTACTGTACTGTTCCACTGACTTTTTTCTTCCGTCCATTGACTTAAGTTAGTTTACATTTATT 598 21512253 0.770483091 25 572 7045 0.958810069 2.321184027 0.129290618 0.352842809 0.557208238 598 33 3 838 3L:21512186-21512287 8 761 2432 FBgn0037092 152.03 9.373333333 14.24333333 5.005591002 81.18776671 53.42850456 1 1 1 0.1 dme-miR-252-5p 6mer3-8 GTACTT 3L 21513013 21513018 - 3L_21513013_21513018_- 0.999804575 0.999786144 0.999795359 1.31E-05 SAK FBtr0078387 21512139 21513065 3L - 21512993 21513032 3'utr SAK FlyBase G38997.1 AAGTTTGAACAAATGTACTTGTATTGTAAATTAAGGGTAA 17 21513019 0.902393648 2 17 153 1 1.322219295 0.047619048 0.176470588 0.333333333 17 0 0 21 3L:21512993-21513032 6 SAK FBtr0078387 21512139 21513065 GTACTT 6mer3-8 dme-miR-252-5p 3L - 21512984 21513033 3'utr SAK FlyBase G29451.1 TAAGTTTGAACAAATGTACTTGTATTGTAAATTAAGGGTAAATATATTTT 8 21513019 0.9829522 2 8 64 1 1.079181246 0.25 0.5 0.666666667 8 0 0 12 3L:21512984-21513033 6 12 2433 FBgn0026371 393.3133333 14.06333333 21.48666667 0.030510026 0.853282768 0.558485883 1 1 1 0.1 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 21521846 21521851 + 3L_21521846_21521851_+ 0.783276933 0.950755707 0.86701632 0.118425395 Cdk12 FBtr0332716|FBtr0078358|FBtr0078357 21521780|21521780|21521780 21522156|21522684|21522156 3L + 21521809 21521888 3'utr Cdk12 FlyBase G32111.1 GTGAAGGAGAGCTACATACAGCGTGAAGGCGAGGAGTGTTCCTGGTGGCACTAGTAACTAGCCGTAACTAGCAATAACGT 23 21521845 0.968018259 4 22 112 0.964285714 1.431363764 0.392857143 0.173913043 0.321428571 23 1 0 27 3L:21521809-21521888 6 Cdk12 FBtr0078357|FBtr0078358|FBtr0332716 21521780|21521780|21521780 21522156|21522684|21522156 GTTCCT 6mer2-7 dme-miR-276a-3p 3L + 21521826 21521869 3'utr Cdk12 FlyBase G24279.1 ACAGCGTGAAGGCGAGGAGTGTTCCTGGTGGCACTAGTAACTAG 9 21521845 0.814845642 3 8 43 1 1.041392685 0.454545455 0.222222222 0.363636364 9 0 0 11 3L:21521826-21521869 6 14 2434 FBgn0037093 1128.82 30.18666667 46.38666667 0.012402332 0.463780919 0.301810865 1 1 1 0.1 dme-miR-1003-3p 7mer-m8 ATGTGAG 3L 21527687 21527693 + 3L_21527687_21527693_+ 0.671546975 0.67080392 0.671175448 0.000525451 CG7611 FBtr0301197|FBtr0078365|FBtr0078364|FBtr0301198|FBtr0078361|FBtr0078366|FBtr0078359|FBtr0078362|FBtr0078363 21527663|21527663|21527663|21527663|21527663|21527663|21527663|21527663|21527663 21528163|21528163|21528163|21528163|21528163|21528163|21528163|21528163|21528163 3L + 21527599 21527811 stop_codon CG7611 FlyBase G32127.1 AGCGCAACGACTGAGAGCGACGATTGCTCTTCTAGCTCGTCTTCGTCCTCCTGGAATATGACTTAAGGTCCCGAGCAGTAGCAAATGGATGTGAGTGGGATAGATTTTGGATGCTGATATAGTTATAGTGCGCCCTGATTTCGATATAAAGCTTAATGCGTACCGCTCTGATGGCGCATCGGGGTCGTCGTTGCTACAAACTGCCATTACAAC 246 21527684 0.915601417 39 235 1600 0.960854093 1.73239376 0.380782918 0.117886179 0.227758007 246 7 4 270 3L:21527599-21527811 7 CG7611 FBtr0078359|FBtr0078362|FBtr0078363|FBtr0078361|FBtr0078366|FBtr0078364|FBtr0301198|FBtr0301197|FBtr0078365 21527663|21527663|21527663|21527663|21527663|21527663|21527663|21527663|21527663 21528163|21528163|21528163|21528163|21528163|21528163|21528163|21528163|21528163 ATGTGAG 7mer-m8 dme-miR-1003-3p 3L + 21527631 21527851 stop_codon CG7611 FlyBase G24295.1 TAGCTCGTCTTCGTCCTCCTGGAATATGACTTAAGGTCCCGAGCAGTAGCAAATGGATGTGAGTGGGATAGATTTTGGATGCTGATATAGTTATAGTGCGCCCTGATTTCGATATAAAGCTTAATGCGTACCGCTCTGATGGCGCATCGGGGTCGTCGTTGCTACAAACTGCCATTACAACAATATGTATGAGCAGCATGACTTACGATTAGCATTAATTA 176 21527684 0.917388009 29 170 1023 0.958955224 2.409933123 0.481343284 0.380681818 0.593283582 176 11 0 257 3L:21527631-21527851 7 117 2435 FBgn0037094 718 25.08 38.30333333 0.162952646 4.66507177 3.054564442 3 3 3 0.1 dme-miR-283-5p 8mer-m1 TGATATTT 3L 21530167 21530174 - 3L_21530167_21530174_- 0.555457327 0.554976738 0.555217033 0.000339836 Mkrn1 FBtr0078383 21529957 21531468 3L - 21530165 21530195 3'utr Mkrn1 FlyBase G39015.1 ATAGCTAAACCTATCCAGAAGTGATATTTTT 8 21530169 0.647468349 4 7 57 0.888888889 0.903089987 0 0.125 0.222222222 8 1 0 8 3L:21530165-21530195 8 Mkrn1 FBtr0078383 21529957 21531468 TGATATTT 8mer-m1 dme-miR-283-5p 3L - 21530160 21530195 3'utr Mkrn1 FlyBase G29460.1 ATAGCTAAACCTATCCAGAAGTGATATTTTTCTTTG 5 21530169 0.972516132 3 5 41 1 0.84509804 0 0.4 0.571428571 5 0 0 7 3L:21530160-21530195 8 6 2436 FBgn0029152 1179.853333 63.02 97.17333333 0.005085378 0.095207871 0.061745335 -5 -5 -5 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3L 21530510 21530516 - 3L_21530510_21530516_- 0.442610968 0.416378106 0.429494537 0.018549461 Mkrn1 FBtr0078383 21529957 21531468 3L - 21530499 21530583 3'utr Mkrn1 FlyBase G39018.1 TGTAACAATAACTTAAAAATCTCAATAATTGCATAGAATCGGGTTCAGCGATTCGAACCCATTTGTATGTGATTCTAGTTGACAA 26 21530521 0.714901183 9 19 204 0.7 0.84509804 0.033333333 0.153846154 0.266666667 26 7 2 21 3L:21530499-21530583 7 Mkrn1 FBtr0078383 21529957 21531468 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 21530491 21530533 3'utr Mkrn1 FlyBase G29462.1 ATTCGAACCCATTTGTATGTGATTCTAGTTGACAAACAAAATA 6 21530512 0.987489023 4 5 49 1 1 0.4 0.8 0.9 5 0 0 10 3L:21530491-21530533 7 6.5 2437 FBgn0029152 1179.853333 63.02 97.17333333 0.005509159 0.10314186 0.066890779 5 -4 0.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 21530710 21530715 - 3L_21530710_21530715_- 0.999999609 0.999993188 0.999996398 4.53E-06 Mkrn1 FBtr0305331|FBtr0078384|FBtr0078383 21530604|21530604|21529957 21531468|21531468|21531468 3L - 21530692 21530779 3'utr Mkrn1 FlyBase G39020.1 ACTGCAAATATGATATGTATAACATCTTTACTGTATATGAATTTTAAGTTTATACTTTCGAAATGTACCTCTTTAAAATGTTTTATTT 99 21530716 0.836772961 11 99 897 1 2.11058971 0.015503876 0.212121212 0.395348837 99 0 0 129 3L:21530692-21530779 6 Mkrn1 FBtr0078383|FBtr0078384|FBtr0305331 21529957|21530604|21530604 21531468|21531468|21531468 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L - 21530690 21530764 3'utr Mkrn1 FlyBase G29464.1 TGTATAACATCTTTACTGTATATGAATTTTAAGTTTATACTTTCGAAATGTACCTCTTTAAAATGTTTTATTTTT 53 21530716 0.859013843 7 53 493 1 1.886490725 0 0.358490566 0.558441558 53 0 0 77 3L:21530690-21530764 6 68 2438 FBgn0029152 1179.853333 63.02 97.17333333 0.057634282 1.079022533 0.699780461 1 1 1 0.1 dme-miR-14-3p 7mer-A1 AGACTGA 3L 21531075 21531081 - 3L_21531075_21531081_- 0.82334625 0.823329408 0.823337829 1.20E-05 Mkrn1 FBtr0305331|FBtr0078384|FBtr0078383 21530604|21530604|21529957 21531468|21531468|21531468 3L - 21531056 21531116 3'utr Mkrn1 FlyBase G39021.1 ATTTTCAAAACTGGTGACTGTAAATTATGGCTTTCAGACTGAATTGTAAAGATAAAAATGC 102 21531084 0.707398048 9 99 751 0.976 1.785329835 0.04 0.18627451 0.336 102 2 1 122 3L:21531056-21531116 7 Mkrn1 FBtr0078383|FBtr0078384|FBtr0305331 21529957|21530604|21530604 21531468|21531468|21531468 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 21531059 21531110 3'utr Mkrn1 FlyBase G29466.1 AAAACTGGTGACTGTAAATTATGGCTTTCAGACTGAATTGTAAAGATAAAAA 87 21531084 0.636788534 11 84 633 0.947826087 1.736396502 0.07826087 0.252873563 0.434782609 87 5 1 109 3L:21531059-21531110 7 89 2439 FBgn0029152 1179.853333 63.02 97.17333333 0.075433105 1.412250079 0.915889133 3 3 3 0.1 dme-miR-2b-2-5p 6mer2-7 TGAAGA 3L 21540649 21540654 + 3L_21540649_21540654_+ 1 0.999999842 0.999999921 1.41E-07 VhaM9.7-b FBtr0078369|FBtr0333454 21540394|21540394 21540698|21541215 3L + 21540633 21540664 3'utr VhaM9.7-b FlyBase G32143.1 ATCGAGTGTCTTAAAATGAAGATTGAAACCTA 5 21540643 0.634010009 4 4 33 0.8 0.602059991 0.2 0 0 5 1 0 4 3L:21540633-21540664 6 VhaM9.7-b FBtr0333454|FBtr0078369 21540394|21540394 21541215|21540698 TGAAGA 6mer2-7 dme-miR-2b-2-5p 3L + 21540636 21540670 3'utr VhaM9.7-b FlyBase G24306.1 GAGTGTCTTAAAATGAAGATTGAAACCTAAAATAA 5 21540649 0.821549564 2 4 31 0.8 0.602059991 0 0 0 5 1 0 4 3L:21540636-21540670 6 5 2440 FBgn0028663 439.5 80.42 122.6266667 0.011376564 0.062173589 0.040774165 6 0 3 0.1 dme-miR-33-5p 7mer-A1 AATGCAA 3L 21630777 21630783 - 3L_21630777_21630783_- 0.782911819 0.782330354 0.782621086 0.000411112 MED1 FBtr0302592 21630119 21630911 3L - 21630732 21630784 3'utr MED1 FlyBase G39065.1 TAATGCAAATGCTGTATTTACTTTAGCTATAAAACGATTTGTAATTTGCCTAC 8 21630763 0.991342102 5 7 67 0.875 0.84509804 0.125 0 0 8 1 0 7 3L:21630732-21630784 7 MED1 FBtr0302592 21630119 21630911 AATGCAA 7mer-A1 dme-miR-33-5p 3L - 21630751 21630799 3'utr MED1 FlyBase G29503.1 AACCTATCTTTAAACTAATGCAAATGCTGTATTTACTTTAGCTATAAAA 9 21630775 0.872472412 4 9 86 1 1.113943352 0 0.444444444 0.615384615 9 0 0 13 3L:21630751-21630799 7 6.5 2441 FBgn0037109 608.09 15.64333333 23.92 0.010689207 0.415512465 0.27173913 -20 -8 -14 0.1 dme-miR-11-3p 8mer-m1 CTGTGATG 3L 216363 216370 + 3L_216363_216370_+ 0.462270879 0.462257783 0.462264331 9.26E-06 CG16940 FBtr0072486|FBtr0072487 216108|216108 216479|216479 3L + 216317 216385 3'utr CG16940 FlyBase G26717.1 TGAACCACATTGTGGGTCCGAGCTTTATGCTTGACAAAAATTGACTCTGTGATGCTTCCTTTTTCGGTT 25 216362 0.890948911 9 21 195 0.903225806 1.447158031 0.129032258 0.24 0.387096774 25 3 0 28 3L:216317-216385 8 CG16940 FBtr0072487|FBtr0072486 216108|216108 216479|216479 CTGTGATG 8mer-m1 dme-miR-11-3p 3L + 216320 216391 3'utr CG16940 FlyBase G20203.1 ACCACATTGTGGGTCCGAGCTTTATGCTTGACAAAAATTGACTCTGTGATGCTTCCTTTTTCGGTTTGCATA 28 216361 0.968264553 12 27 221 1 1.591064607 0.102564103 0.333333333 0.538461538 27 0 0 39 3L:216320-216391 8 21 2442 FBgn0035111 907.85 30.83666667 47.24666667 0.023131575 0.681007459 0.444475801 1 2 1.5 0.1 dme-miR-283-5p 7mer-m8 TGATATT 3L 21642236 21642242 + 3L_21642236_21642242_+ 0.620203587 0.620203677 0.620203632 7.07E-08 Atox1 FBtr0330117|FBtr0078426 21642160|21642106 21642599|21642599 3L + 21642193 21642282 3'utr Atox1 FlyBase G32188.1 CACGTTGCCGCTCCGAAAGCATTCGATTTGGGTCGCTGTTCAGTGATATTCATGGGATACATACAAATTTTACTCTTAACCAAATCAAAT 61 21642232 0.680270866 17 56 502 0.918918919 1.531478917 0.175675676 0.180327869 0.324324324 61 5 1 68 3L:21642193-21642282 7 Atox1 FBtr0078426|FBtr0330117 21642106|21642160 21642599|21642599 TGATATT 7mer-m8 dme-miR-283-5p 3L + 21642198 21642274 3'utr Atox1 FlyBase G24336.1 TGCCGCTCCGAAAGCATTCGATTTGGGTCGCTGTTCAGTGATATTCATGGGATACATACAAATTTTACTCTTAACCA 55 21642232 0.988571323 10 50 457 0.903614458 1.273001272 0.120481928 0.363636364 0.578313253 55 5 3 75 3L:21642198-21642274 7 45.5 2443 FBgn0052446 139.3333333 19.38666667 29.60666667 0.326555024 2.346973865 1.536816032 4 4 4 0.1 dme-miR-970-3p 8mer-A1 TCTTATGA 3L 21642527 21642534 + 3L_21642527_21642534_+ 0.551801188 0.54082608 0.546313634 0.007760568 Atox1 FBtr0330117|FBtr0078426 21642160|21642106 21642599|21642599 3L + 21642485 21642542 3'utr Atox1 FlyBase G32190.1 AATCCAACGTAGTTGCCAATAAATGATATACGCCAGTTGCCCTCTTATGACTAATCGT 12 21642522 0.990173395 4 9 88 0.6875 0.740362689 0.125 0.25 0.4375 12 4 1 11 3L:21642485-21642542 8 Atox1 FBtr0078426|FBtr0330117 21642106|21642160 21642599|21642599 TCTTATGA 8mer-A1 dme-miR-970-3p 3L + 21642496 21642552 3'utr Atox1 FlyBase G24338.1 GTTGCCAATAAATGATATACGCCAGTTGCCCTCTTATGACTAATCGTAATATTACAA 12 21642522 0.98295292 5 10 83 0.904761905 1.278753601 0.285714286 0.583333333 0.761904762 12 2 0 19 3L:21642496-21642552 8 11 2444 FBgn0052446 139.3333333 19.38666667 29.60666667 0.078947368 0.567400275 0.371537942 5 5 5 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 21683107 21683113 + 3L_21683107_21683113_+ 0.661614985 0.661615222 0.661615104 1.41E-07 CG11248 FBtr0078430|FBtr0333967|FBtr0078431 21682915|21682915|21682915 21683231|21683231|21683231 3L + 21683060 21683127 3'utr CG11248 FlyBase G32194.1 AGATCCAACTTAGTTCAATTTATATAAATATTTATTTTGTTGTCTTTTGTGTTCGTTATCTTTATTTA 19 21683106 0.879119069 2 19 281 1 1.380211242 0 0.157894737 0.333333333 19 0 0 24 3L:21683060-21683127 7 CG11248 FBtr0078431|FBtr0333967|FBtr0078430 21682915|21682915|21682915 21683231|21683231|21683231 TGTGTTC 7mer-m8 dme-miR-317-3p 3L + 21683093 21683126 3'utr CG11248 FlyBase G24341.1 ATTTTGTTGTCTTTTGTGTTCGTTATCTTTATTT 11 21683106 0.729967988 2 11 156 1 1.204119983 0 0.272727273 0.5 11 0 0 16 3L:21683093-21683126 7 13.5 2445 FBgn0037117 323.0366667 13.05333333 20.00333333 0.041790922 1.03421859 0.674887519 1 1 1 0.1 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA 3L 21724674 21724681 - 3L_21724674_21724681_- 0.627000719 0.598691239 0.612845979 0.020017839 CG11247 FBtr0113184|FBtr0078459|FBtr0078458|FBtr0332769 21724324|21724324|21724324|21724324 21724898|21724898|21724898|21724898 3L - 21724656 21724712 3'utr CG11247 FlyBase G39103.1 TCCCAATTTTGCTGCTACCAAAAAGTATAATTTGAAGAATGTATGAGTTAGTGTTGT 8 21724682 0.977485402 7 8 54 1 1 0.1 0.125 0.3 8 0 0 10 3L:21724656-21724712 8 CG11247 FBtr0332769|FBtr0078458|FBtr0078459|FBtr0113184 21724324|21724324|21724324|21724324 21724898|21724898|21724898|21724898 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p 3L - 21724659 21724721 3'utr CG11247 FlyBase G29527.1 TACCCTTAATCCCAATTTTGCTGCTACCAAAAAGTATAATTTGAAGAATGTATGAGTTAGTGT 7 21724704 0.96920563 4 7 48 1 1.041392685 0.272727273 0.285714286 0.545454545 7 0 0 11 3L:21724659-21724721 8 3 2446 FBgn0037120 533.7966667 23.84666667 36.66 0.005620118 0.125803746 0.081833061 1 23 12 0.1 dme-miR-305-3p 7mer-A1 TGTGCCA 3L 21724858 21724864 - 3L_21724858_21724864_- 0.34792578 0.49252047 0.420223125 0.102243893 CG11247 FBtr0113184|FBtr0078459|FBtr0078458|FBtr0332769 21724324|21724324|21724324|21724324 21724898|21724898|21724898|21724898 3L - 21724742 21724927 stop_codon CG11247 FlyBase G39104.1 TTGCTACCATGTATATGAAACAGAAGTAGAATCCAGGAGTTGATAGCCAACGCCAAATGCGAGTGTGCCATAGAAGAAGGATTTGTAGAACTAGTTCTTGCCATTTAGTTTAGTGTTTAGTAACCCAAAGTTGCAGAACGAAACCCAACCAAATAATTTATCCCAAAGATATATACTTTGTAGTAC 73 21724835 0.898118888 14 70 581 0.954022989 1.919078092 0.229885057 0.178082192 0.310344828 73 4 0 83 3L:21724742-21724927 7 CG11247 FBtr0332769|FBtr0078458|FBtr0078459|FBtr0113184 21724324|21724324|21724324|21724324 21724898|21724898|21724898|21724898 TGTGCCA 7mer-A1 dme-miR-305-3p 3L - 21724759 21724886 3'utr CG11247 FlyBase G29528.1 GATAGCCAACGCCAAATGCGAGTGTGCCATAGAAGAAGGATTTGTAGAACTAGTTCTTGCCATTTAGTTTAGTGTTTAGTAACCCAAAGTTGCAGAACGAAACCCAACCAAATAATTTATCCCAAAGA 58 21724864 0.977256959 13 54 348 0.949367089 1.875061263 0.215189873 0.327586207 0.506329114 58 4 0 75 3L:21724759-21724886 7 26 2447 FBgn0037120 533.7966667 23.84666667 36.66 0.048707685 1.090299133 0.709219858 -29 0 -14.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 21824146 21824151 + 3L_21824146_21824151_+ 0.950367335 0.91538244 0.932874888 0.02473806 CG7407 FBtr0078440|FBtr0078440|FBtr0078440 21824099|21824099|21824099 21824571|21824571|21824571 3L + 21824034 21824244 stop_codon CG7407 FlyBase G32205.1 GGAATTGAACCTCCAGGACCGAATAAGCGACCAGGATCTCAAGCAGCAGGTGCGGCTCTATCGCTGAAGTGGCGCCGAGCCTGGGCTCACCCTACCTGAATGTACAGACTTGTGTGATCTATTAGTTTAATGTTTAAAATTCCAAGATTTGGTGTTGCCTCATACGGTCCACTAAGTGCGGGCAAGTCTTTAGTCAGAGAGCTATCTCATC 258 21824145 0.999997264 26 248 2332 0.963815789 1.767897616 0.217105263 0.158914729 0.286184211 258 7 4 293 3L:21824034-21824244 6 CG7407 FBtr0078440|FBtr0078440|FBtr0078440 21824099|21824099|21824099 21824571|21824571|21824571 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 21824037 21824169 stop_codon CG7407 FlyBase G24348.1 ATTGAACCTCCAGGACCGAATAAGCGACCAGGATCTCAAGCAGCAGGTGCGGCTCTATCGCTGAAGTGGCGCCGAGCCTGGGCTCACCCTACCTGAATGTACAGACTTGTGTGATCTATTAGTTTAATGTTTA 129 21824145 0.988546648 16 121 1145 0.938547486 1.924279286 0.173184358 0.286821705 0.48603352 129 10 1 168 3L:21824037-21824169 6 139.5 2448 FBgn0037134 80.66666667 9.62 14.74333333 1.729338843 14.5010395 9.461903685 1 1 1 0.1 dme-miR-263a-5p 7mer-m1 TGCCATT 3L 21827008 21827014 + 3L_21827008_21827014_+ 0.765586661 0.765586663 0.765586662 0 CG7414 FBtr0303247|FBtr0303245 21826936|21826936 21827856|21827856 3L + 21826956 21827031 3'utr CG7414 FlyBase G32220.1 TTGTCAGCTCCTAGGCTCCACTCACCTCTTTCACACACATTTTGTATTAGCATGCCATTAGGATTAGGGATTGCGC 23 21827013 0.985561845 11 21 171 0.923076923 1.079181246 0.192307692 0.086956522 0.192307692 23 1 1 24 3L:21826956-21827031 7 CG7414 FBtr0303247|FBtr0303245 21826936|21826936 21827856|21827856 TGCCATT 7mer-m1 dme-miR-263a-5p 3L + 21826983 21827025 3'utr CG7414 FlyBase G24361.1 CTTTCACACACATTTTGTATTAGCATGCCATTAGGATTAGGGA 7 21827007 0.981728126 5 6 46 0.9 0.954242509 0.1 0.285714286 0.5 7 1 0 9 3L:21826983-21827025 7 14 2449 FBgn0037135 1558.176667 79.32666667 121.5733333 0.008984861 0.176485419 0.115156833 -5 1 -2 0.1 dme-miR-184-5p 7mer-m1 GATAAGG 3L 21827363 21827369 + 3L_21827363_21827369_+ 0.82040856 0.825582369 0.822995464 0.003658429 CG7414 FBtr0303247|FBtr0303245 21826936|21826936 21827856|21827856 3L + 21827330 21827375 3'utr CG7414 FlyBase G32223.1 GGACAGGGTCATCCCAATGGCCAGCACATCAGCGATAAGGAGCGCA 10 21827358 0.98729041 2 10 21 1 1.041392685 0.272727273 0.1 0.181818182 10 0 0 11 3L:21827330-21827375 7 CG7414 FBtr0303247|FBtr0303245 21826936|21826936 21827856|21827856 GATAAGG 7mer-m1 dme-miR-184-5p 3L + 21827301 21827384 3'utr CG7414 FlyBase G24363.1 ACGCTGCCGATCAGCCACCGAATTCGTATGGACAGGGTCATCCCAATGGCCAGCACATCAGCGATAAGGAGCGCAAGATTCGCA 8 21827358 0.89211106 4 8 27 1 1.176091259 0.333333333 0.75 0.866666667 8 0 0 15 3L:21827301-21827384 7 6.5 2450 FBgn0037135 1558.176667 79.32666667 121.5733333 0.004171542 0.081939659 0.053465672 5 5 5 0.1 dme-miR-2a-2-5p 6mer2-7 GATGAG 3L 21827495 21827500 + 3L_21827495_21827500_+ 0.642157365 0.789470148 0.715813756 0.104165809 CG7414 FBtr0303247|FBtr0303245 21826936|21826936 21827856|21827856 3L + 21827432 21827546 3'utr CG7414 FlyBase G32224.1 AGCCAGGGCGAGAATCTGGAGCTGAACCAACTGAACAAGATTAAGATGGAAGCACAGTACCTGGATGAGCTCAAGGCTCTCAAGCAGTCTGCCTAGGAGGACGTTAATGGCGTTG 30 21827497 0.942392626 9 26 113 0.891891892 1.217483944 0.324324324 0.2 0.351351351 30 3 1 33 3L:21827432-21827546 6 CG7414 FBtr0303247|FBtr0303245 21826936|21826936 21827856|21827856 GATGAG 6mer2-7 dme-miR-2a-2-5p 3L + 21827436 21827509 3'utr CG7414 FlyBase G24364.1 AGGGCGAGAATCTGGAGCTGAACCAACTGAACAAGATTAAGATGGAAGCACAGTACCTGGATGAGCTCAAGGCT 23 21827497 0.782753911 6 21 69 0.921052632 1.544068044 0.052631579 0.434782609 0.657894737 23 3 0 35 3L:21827436-21827509 6 12 2451 FBgn0037135 1558.176667 79.32666667 121.5733333 0.007701309 0.151273216 0.098705857 -2 -2 -2 0.1 dme-miR-965-3p 6mer3-8 TACGCT 3L 21827674 21827679 + 3L_21827674_21827679_+ 0.999993531 0.999999992 0.999996761 4.60E-06 CG7414 FBtr0303247|FBtr0303245|FBtr0078441|FBtr0303246 21826936|21826936|21827526|21827526 21827856|21827856|21827856|21827856 3L + 21827643 21827691 3'utr CG7414 FlyBase G32226.1 TCACCTCCTGTTCGTCCCCTTCCTGCTGTTTTACGCTCAGTTTGTGGCC 15 21827673 0.736859488 6 12 143 0.85 1.230448921 0.05 0.333333333 0.5 15 3 0 17 3L:21827643-21827691 6 CG7414 FBtr0078441|FBtr0303246|FBtr0303247|FBtr0303245 21827526|21827526|21826936|21826936 21827856|21827856|21827856|21827856 TACGCT 6mer3-8 dme-miR-965-3p 3L + 21827643 21827692 3'utr CG7414 FlyBase G24366.1 TCACCTCCTGTTCGTCCCCTTCCTGCTGTTTTACGCTCAGTTTGTGGCCC 9 21827673 0.722351232 5 8 69 1 1.113943352 0.153846154 0.333333333 0.538461538 9 0 0 13 3L:21827643-21827692 6 8 2452 FBgn0037135 1558.176667 79.32666667 121.5733333 0.005134206 0.100848811 0.065803904 1 1 1 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3L 21827734 21827740 + 3L_21827734_21827740_+ 0.521223851 0.521223855 0.521223853 0 CG7414 FBtr0303247|FBtr0303245|FBtr0078441|FBtr0303246 21826936|21826936|21827526|21827526 21827856|21827856|21827856|21827856 3L + 21827711 21827764 3'utr CG7414 FlyBase G32227.1 AAGTTAAAACATTTTTCTACTATTGTGATTTCCCAACTAATTTCGGCAAAACGT 194 21827740 0.734981933 9 190 1861 0.984 2.089905111 0.004 0.25257732 0.42 194 3 1 246 3L:21827711-21827764 7 CG7414 FBtr0078441|FBtr0303246|FBtr0303247|FBtr0303245 21827526|21827526|21826936|21826936 21827856|21827856|21827856|21827856 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 21827712 21827777 3'utr CG7414 FlyBase G24367.1 AGTTAAAACATTTTTCTACTATTGTGATTTCCCAACTAATTTCGGCAAAACGTACAGTAACTCCCG 138 21827740 0.729529215 8 131 1324 0.955 1.37794338 0.015 0.362318841 0.56 138 2 7 191 3L:21827712-21827777 7 163.5 2453 FBgn0037135 1558.176667 79.32666667 121.5733333 0.104930335 2.061097571 1.344867295 -6 -6 -6 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 3L 21836252 21836257 + 3L_21836252_21836257_+ 0.973213083 0.999466056 0.986339569 0.018563674 Nopp140 FBtr0332811|FBtr0089579|FBtr0332812|FBtr0089580 21835879|21836134|21836134|21835879 21836685|21836685|21836685|21836685 3L + 21836170 21836321 3'utr Nopp140 FlyBase G32242.1 CGGATATAACTAACTAGTTTAAGTAAAATATTTGCCTTACGCAATAGTTCCGCCAACATGTAAATTCTTTCCAAACTCTTGATTGACTTCGGGAAGTCCGTACTTCCGTTTTAATGTGAATTATTCGAATGCAAATTGGCGGTCGACAAACC 39 21836251 0.984261835 18 36 293 0.954545455 1.322219295 0.113636364 0.128205128 0.227272727 39 1 1 42 3L:21836170-21836321 6 Nopp140 FBtr0089580|FBtr0332812|FBtr0089579|FBtr0332811 21835879|21836134|21836134|21835879 21836685|21836685|21836685|21836685 TTGACT 6mer3-8 dme-miR-1012-3p 3L + 21836208 21836312 3'utr Nopp140 FlyBase G24377.1 ACGCAATAGTTCCGCCAACATGTAAATTCTTTCCAAACTCTTGATTGACTTCGGGAAGTCCGTACTTCCGTTTTAATGTGAATTATTCGAATGCAAATTGGCGGT 12 21836252 0.98718481 8 12 96 1 1.301029996 0.15 0.5 0.7 12 0 0 20 3L:21836208-21836312 6 9 2454 FBgn0037137 2382.533333 99.02333333 152.5933333 0.003777492 0.09088767 0.058980296 1 0 0.5 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3L 21837137 21837143 - 3L_21837137_21837143_- 0.443112218 0.44291684 0.443014529 0.000138169 P5CDh1 FBtr0332813|FBtr0303031|FBtr0078446|FBtr0078447|FBtr0078445 21836663|21836663|21836663|21836663|21836663 21837488|21837488|21837488|21837488|21837488 3L - 21837121 21837223 3'utr P5CDh1 FlyBase G39122.1 CTTCGAACTACAAACACACCATGACATGGATATTTTAAATGAATACTATGTAATATCATTATTTTACGATTTAAACGCAATGTGATTATTTAATTATATATGA 47 21837135 0.988599795 15 45 419 0.964912281 1.263241435 0.280701754 0.191489362 0.333333333 47 0 2 55 3L:21837121-21837223 7 P5CDh1 FBtr0078445|FBtr0078446|FBtr0078447|FBtr0332813|FBtr0303031 21836663|21836663|21836663|21836663|21836663 21837488|21837488|21837488|21837488|21837488 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 21837092 21837156 3'utr P5CDh1 FlyBase G29542.1 GATTTAAACGCAATGTGATTATTTAATTATATATGATTTATAATTAAATGGCCCGCCTTATGTTT 23 21837135 0.992063414 8 21 233 0.903225806 1.146128036 0.258064516 0.304347826 0.483870968 23 2 1 28 3L:21837092-21837156 7 31 2455 FBgn0037138 509.79 22.77333333 34.87 0.060809353 1.361241218 0.889016346 -8 -8 -8 0.1 dme-miR-968-5p 6mer3-8 ACTACT 3L 21837410 21837415 - 3L_21837410_21837415_- 0.999947658 1 0.999973829 3.70E-05 P5CDh1 FBtr0332813|FBtr0303031|FBtr0078446|FBtr0078447|FBtr0078445 21836663|21836663|21836663|21836663|21836663 21837488|21837488|21837488|21837488|21837488 3L - 21837410 21837506 stop_codon P5CDh1 FlyBase G39124.1 CCATACATGTGCGAGTAAGCTGGCCGACAGAAGATGCGCAAGGGGAATGGGATGAGCAAAAGTAGTGAAAACCAGACAGGAATCTCATATAACTACT 19 21837419 0.917950468 7 16 58 0.863636364 1.278753601 0.181818182 0.105263158 0.227272727 19 3 0 19 3L:21837410-21837506 5 P5CDh1 FBtr0078445|FBtr0078446|FBtr0078447|FBtr0332813|FBtr0303031 21836663|21836663|21836663|21836663|21836663 21837488|21837488|21837488|21837488|21837488 ACTACT 6mer3-8 dme-miR-968-5p 3L - 21837390 21837471 3'utr P5CDh1 FlyBase G29544.1 GCGCAAGGGGAATGGGATGAGCAAAAGTAGTGAAAACCAGACAGGAATCTCATATAACTACTAACTATATAAACATACTTAA 9 21837418 0.937811203 7 8 30 1 1.113943352 0.307692308 0.333333333 0.538461538 9 0 0 13 3L:21837390-21837471 6 4 2456 FBgn0037138 509.79 22.77333333 34.87 0.007846368 0.175644028 0.114711787 4 3 3.5 0.1 dme-miR-79-3p 7mer-A1 AGCTTTA 3L 21923272 21923278 + 3L_21923272_21923278_+ 0.823345432 0.753492544 0.788418988 0.049393459 mub FBtr0301364|FBtr0111017|FBtr0304983|FBtr0304980|FBtr0304984 21923187|21923187|21923187|21923187|21923187 21924114|21932702|21924114|21924114|21924114 3L + 21923181 21923279 stop_codon mub FlyBase G32251.1 CGTACTAGGGGTAGGGCTGCAGCTGCGTTAGCTGGAGAGCAGTGGAGATATAGTCCCGTAGATATATAGGTTTTCATGGTAGCGTTGCGAAAGCTTTAG 22 21923265 0.982592127 9 20 154 0.956521739 1.342422681 0.304347826 0.045454545 0.086956522 22 1 0 22 3L:21923181-21923279 7 mub FBtr0304980|FBtr0304984|FBtr0111017|FBtr0304983|FBtr0301364 21923187|21923187|21923187|21923187|21923187 21924114|21924114|21932702|21924114|21924114 AGCTTTA 7mer-A1 dme-miR-79-3p 3L + 21923210 21923289 3'utr mub FlyBase G24382.1 AGCTGGAGAGCAGTGGAGATATAGTCCCGTAGATATATAGGTTTTCATGGTAGCGTTGCGAAAGCTTTAGTCTTTAGATT 13 21923257 0.829339798 5 11 101 0.882352941 1.176091259 0 0.307692308 0.470588235 13 2 0 15 3L:21923210-21923289 7 6.5 2457 FBgn0262737 2368.09 79.81333333 123.0033333 0.002744828 0.081440027 0.052844096 7 15 11 0.1 dme-miR-970-3p 6mer2-7 CTTATG 3L 21923326 21923331 + 3L_21923326_21923331_+ 0.998731284 0.998685048 0.998708166 3.27E-05 mub FBtr0301364|FBtr0111017|FBtr0304983|FBtr0304980|FBtr0304984 21923187|21923187|21923187|21923187|21923187 21924114|21932702|21924114|21924114|21924114 3L + 21923306 21923341 3'utr mub FlyBase G32252.1 TGTATAAAATTCGCTTTAAACTTATGTGGTATGCAT 6 21923328 0.9841719 2 6 45 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3L:21923306-21923341 6 mub FBtr0304980|FBtr0304984|FBtr0111017|FBtr0304983|FBtr0301364 21923187|21923187|21923187|21923187|21923187 21924114|21924114|21932702|21924114|21924114 CTTATG 6mer2-7 dme-miR-970-3p 3L + 21923306 21923356 3'utr mub FlyBase G24383.1 TGTATAAAATTCGCTTTAAACTTATGTGGTATGCATACAATTTGCAAACGT 7 21923328 0.990100258 2 6 59 0.857142857 1.079181246 0.071428571 0.428571429 0.714285714 7 2 0 12 3L:21923306-21923356 6 6.5 2458 FBgn0262737 2368.09 79.81333333 123.0033333 0.002744828 0.081440027 0.052844096 -2 -2 -2 0.1 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 21923529 21923536 + 3L_21923529_21923536_+ 0.668606243 0.668633014 0.668619628 1.90E-05 mub FBtr0301364|FBtr0111017|FBtr0304983|FBtr0304980|FBtr0304984 21923187|21923187|21923187|21923187|21923187 21924114|21932702|21924114|21924114|21924114 3L + 21923504 21923546 3'utr mub FlyBase G32253.1 AGTCACACTTAGATTAGCCGCATAGGGCAGCTAGAGATTTGAA 44 21923526 0.970701398 3 42 174 0.92 1.662757832 0.44 0.113636364 0.22 44 4 0 46 3L:21923504-21923546 8 mub FBtr0304980|FBtr0304984|FBtr0111017|FBtr0304983|FBtr0301364 21923187|21923187|21923187|21923187|21923187 21924114|21924114|21932702|21924114|21924114 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L + 21923510 21923548 3'utr mub FlyBase G24384.1 ACTTAGATTAGCCGCATAGGGCAGCTAGAGATTTGAATA 19 21923526 0.962822412 3 18 82 1 1.505149978 0.375 0.368421053 0.625 19 0 0 32 3L:21923510-21923548 8 31 2459 FBgn0262737 2368.09 79.81333333 123.0033333 0.013090719 0.388406281 0.25202569 3 3 3 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 3L 21923940 21923945 + 3L_21923940_21923945_+ 0.866728371 0.866660987 0.866694679 4.77E-05 mub FBtr0301364|FBtr0301364|FBtr0111017|FBtr0111017|FBtr0304983|FBtr0304983|FBtr0304980|FBtr0304980|FBtr0304984|FBtr0304984 21923187|21923187|21923187|21923187|21923187|21923187|21923187|21923187|21923187|21923187 21924114|21924114|21932702|21932702|21924114|21924114|21924114|21924114|21924114|21924114 3L + 21923941 21923980 3'utr mub FlyBase G32254.1 ACTTATAATCAATTGTACTCTCTTAGATAGTAAGCACTAA 39 21923963 0.627941341 6 35 330 0.916666667 1.643452676 0.041666667 0.205128205 0.354166667 39 4 0 44 3L:21923941-21923980 4 mub FBtr0304980|FBtr0304980|FBtr0304984|FBtr0304984|FBtr0111017|FBtr0111017|FBtr0304983|FBtr0304983|FBtr0301364|FBtr0301364 21923187|21923187|21923187|21923187|21923187|21923187|21923187|21923187|21923187|21923187 21924114|21924114|21924114|21924114|21932702|21932702|21924114|21924114|21924114|21924114 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 3L + 21923943 21923979 3'utr mub FlyBase G24385.1 TTATAATCAATTGTACTCTCTTAGATAGTAAGCACTA 20 21923963 0.614865365 5 19 170 0.96875 1.491361694 0.03125 0.3 0.5625 20 1 0 31 3L:21923943-21923979 2 5.5 2460 FBgn0262737 2368.09 79.81333333 123.0033333 0.002322547 0.068910792 0.044714235 -23 -23 -23 0.1 dme-miR-14-3p 7mer-A1 AGACTGA 3L 21926166 21926172 + 3L_21926166_21926172_+ 0.820991744 0.822947115 0.82196943 0.001382677 mub FBtr0346820|FBtr0078468|FBtr0333222|FBtr0332736|FBtr0304981|FBtr0304982|FBtr0078470|FBtr0111017 21925263|21925263|21925263|21925263|21925263|21925263|21925263|21923187 21932702|21926699|21932702|21926225|21926699|21926699|21932702|21932702 3L + 21926125 21926199 3'utr mub FlyBase G32257.1 AATTGTTATCGAAATTGTATTTGTGATTTTTGAATATGTTTAGACTGATGTGCAAAATTGATTCTGTTTATTAAT 74 21926164 0.72437265 13 73 763 0.99 1.995635195 0.45 0.297297297 0.48 74 1 0 99 3L:21926125-21926199 7 mub FBtr0111017|FBtr0304982|FBtr0346820|FBtr0304981|FBtr0078468|FBtr0078470|FBtr0333222|FBtr0332736 21923187|21925263|21925263|21925263|21925263|21925263|21925263|21925263 21932702|21926699|21932702|21926699|21926699|21932702|21932702|21926225 AGACTGA 7mer-A1 dme-miR-14-3p 3L + 21926127 21926200 3'utr mub FlyBase G24387.1 TTGTTATCGAAATTGTATTTGTGATTTTTGAATATGTTTAGACTGATGTGCAAAATTGATTCTGTTTATTAATT 58 21926164 0.720590759 13 53 594 0.884057971 1.785329835 0.608695652 0.189655172 0.31884058 58 8 0 61 3L:21926127-21926200 7 35.5 2461 FBgn0262737 2368.09 79.81333333 123.0033333 0.014990984 0.444787838 0.288610065 2 2 2 0.1 dme-miR-14-3p 6mer3-8 AAGACT 3L 21926515 21926520 + 3L_21926515_21926520_+ 0.998928043 0.699611069 0.849269556 0.21164901 mub FBtr0346820|FBtr0078468|FBtr0333222|FBtr0304981|FBtr0304982|FBtr0078470|FBtr0111017 21925263|21925263|21925263|21925263|21925263|21925263|21923187 21932702|21926699|21932702|21926699|21926699|21932702|21932702 3L + 21926497 21926535 3'utr mub FlyBase G32259.1 ACTTTTGCGGCGATTAAAAAGACTTTCTGAAGCGTGGAA 11 21926522 0.645501742 4 11 63 1 1.079181246 0.333333333 0.090909091 0.166666667 11 0 0 12 3L:21926497-21926535 6 mub FBtr0111017|FBtr0304982|FBtr0346820|FBtr0304981|FBtr0078468|FBtr0078470|FBtr0333222 21923187|21925263|21925263|21925263|21925263|21925263|21925263 21932702|21926699|21932702|21926699|21926699|21932702|21932702 AAGACT 6mer3-8 dme-miR-14-3p 3L + 21926489 21926533 3'utr mub FlyBase G24389.1 TTTTAAGCACTTTTGCGGCGATTAAAAAGACTTTCTGAAGCGTGG 6 21926523 0.906069804 3 4 39 0.636363636 0.84509804 0.727272727 0.333333333 0.636363636 6 4 0 7 3L:21926489-21926533 6 7.5 2462 FBgn0262737 2368.09 79.81333333 123.0033333 0.003167109 0.093969262 0.060973957 -7 -8 -7.5 0.1 dme-miR-8-3p 6mer2-7 AGTATT 3L 21938973 21938978 - 3L_21938973_21938978_- 0.999997551 0.999591274 0.999794413 0.000287297 DNApol-eta FBtr0078489 21938632 21938999 3L - 21938926 21938993 3'utr DNApol-eta FlyBase G39135.1 CCTTACACCGCTCCAAGTATTTGAACCTGTATAAGTACCTACGAATGGACCACAGACAAATTTACTTC 17 21938973 0.971482558 7 17 96 1 1.278753601 0.105263158 0.117647059 0.210526316 17 0 0 19 3L:21938926-21938993 6 DNApol-eta FBtr0078489 21938632 21938999 AGTATT 6mer2-7 dme-miR-8-3p 3L - 21938938 21938992 3'utr DNApol-eta FlyBase G29554.1 CTTACACCGCTCCAAGTATTTGAACCTGTATAAGTACCTACGAATGGACCACAGA 10 21938973 0.980305413 5 9 60 0.916666667 1.041392685 0 0.2 0.333333333 10 1 0 11 3L:21938938-21938992 6 12.5 2463 FBgn0037141 470.7833333 18.66 28.63 0.026551492 0.669882101 0.43660496 -5 -5 -5 0.1 dme-miR-283-5p 8mer-A1 TGATATTA 3L 21949406 21949413 + 3L_21949406_21949413_+ 0.559583216 0.392088665 0.47583594 0.118436497 CG14562 FBtr0078472|FBtr0334088 21949341|21949341 21949452|21949866 3L + 21949388 21949421 3'utr CG14562 FlyBase G32275.1 ATTGAAAATTGATAAGATTGATATTAACGTAGCA 14 21949403 0.7541915 3 11 110 0.857142857 1.079181246 0.142857143 0 0 14 2 0 12 3L:21949388-21949421 8 CG14562 FBtr0334088|FBtr0078472 21949341|21949341 21949866|21949452 TGATATTA 8mer-A1 dme-miR-283-5p 3L + 21949388 21949421 3'utr CG14562 FlyBase G24399.1 ATTGAAAATTGATAAGATTGATATTAACGTAGCA 13 21949405 0.742074261 3 13 91 1 1.397940009 0.12 0.538461538 0.76 13 0 0 25 3L:21949388-21949421 8 13.5 2464 FBgn0037142 391.14 8.676666667 13.24 0.034514496 1.555897042 1.019637462 3 1 2 0.1 dme-miR-1007-3p 6mer3-8 TGAGCT 3L 21949569 21949574 + 3L_21949569_21949574_+ 0.999653029 0.948295449 0.973974239 0.036315307 CG14562 FBtr0334088 21949341 21949866 3L + 21949538 21949582 3'utr CG14562 FlyBase G32277.1 GAATACTCTAGCCTTCGGTGATTTATGAAACTGAGCTGACGAGGA 18 21949560 0.592015812 6 17 137 0.909090909 1.301029996 0.318181818 0.222222222 0.363636364 18 2 0 20 3L:21949538-21949582 6 CG14562 FBtr0334088 21949341 21949866 TGAGCT 6mer3-8 dme-miR-1007-3p 3L + 21949527 21949575 3'utr CG14562 FlyBase G24400.1 ACACAACATTCGAATACTCTAGCCTTCGGTGATTTATGAAACTGAGCTG 12 21949561 0.982631994 9 12 90 1 1.204119983 0.5625 0.25 0.4375 12 0 0 16 3L:21949527-21949575 6 5 2465 FBgn0037142 391.14 8.676666667 13.24 0.012783147 0.576258164 0.377643505 9 8 8.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 3L 22066799 22066805 + 3L_22066799_22066805_+ 0.823347362 0.823346573 0.823346967 5.66E-07 CG14561 FBtr0078480|FBtr0334111 22066716|22066716 22066967|22067216 3L + 22066714 22066833 stop_codon CG14561 FlyBase G32292.1 CTAGTGACCGCAGTCCAGCCTTCCCAACCAAAGCCATGGAGCCCTCGCTCAGACTGCCATCGATGTTCTAGAATAAGTTACCATTTACCTGAATGTATTGTTCACACCCAGCGGTCAGCA 128 22066797 0.985488387 14 123 1012 0.96835443 1.582631439 0.46835443 0.1796875 0.335443038 128 2 3 153 3L:22066714-22066833 7 CG14561 FBtr0334111|FBtr0078480 22066716|22066716 22067216|22066967 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3L + 22066745 22066827 3'utr CG14561 FlyBase G24408.1 AGCCATGGAGCCCTCGCTCAGACTGCCATCGATGTTCTAGAATAAGTTACCATTTACCTGAATGTATTGTTCACACCCAGCGG 110 22066797 0.964249231 10 101 852 0.907407407 1.264227348 0.50617284 0.327272727 0.543209877 110 8 7 147 3L:22066745-22066827 7 108 2466 FBgn0037149 161.3333333 18.83333333 28.89 0.669421488 5.734513274 3.738317757 2 2 2 0.1 dme-miR-7-5p 7mer-A1 TCTTCCA 3L 22067456 22067462 - 3L_22067456_22067462_- 0.802565287 0.815444409 0.809004848 0.009106899 CG7139 FBtr0078486 22067268 22067774 3L - 22067446 22067583 3'utr CG7139 FlyBase G39144.2 ATTACTCTATATTACTTTCAATGCTCGTCCCAATTATTTTTAAGTTTGAATAATGCTTCCAGCGTAGAGTTTGTGTACGACGCGAATTCGCAATGCGACTCAGGAAAGTAGTGATTTAGTATCTTCCAATAATATACC 273 22067468 0.765860806 22 267 1892 0.98470948 2.206825876 0.100917431 0.175824176 0.311926606 273 4 1 322 3L:22067446-22067583 7 CG7139 FBtr0078486 22067268 22067774 TCTTCCA 7mer-A1 dme-miR-7-5p 3L - 22067378 22067503 3'utr CG7139 FlyBase G29559.1 CGCGAATTCGCAATGCGACTCAGGAAAGTAGTGATTTAGTATCTTCCAATAATATACCTAATCACAGAATTACTTATTTTTATACTAGTTTACTCAATGTACTACCTAGGTACAATAGGATTAGTG 211 22067468 0.80987533 15 206 1415 0.977198697 2.477121255 0.136807818 0.327014218 0.537459283 211 7 0 300 3L:22067378-22067503 7 83 2467 FBgn0027532 579.5366667 19.16 29.21666667 0.143217858 4.331941545 2.840844267 6 6 6 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 3L 22075151 22075156 - 3L_22075151_22075156_- 1 0.999898681 0.99994934 7.16E-05 CG7130 FBtr0078484 22075054 22075247 3L - 22075117 22075220 3'utr CG7130 FlyBase G39167.1 AATCTCGGGTACCTAGCGTTCTTCGCTGAATAGTCTTTAAGATTAATTTATAGGAACTTAATTATTGACTGTTTATCTAATGAATCCTGCGTTACTTATTGATT 73 22075158 0.686629901 23 69 696 0.952941176 1.306425028 0.105882353 0.150684932 0.270588235 73 1 3 81 3L:22075117-22075220 6 CG7130 FBtr0078484 22075054 22075247 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 22075113 22075172 3'utr CG7130 FlyBase G29575.1 TATAGGAACTTAATTATTGACTGTTTATCTAATGAATCCTGCGTTACTTATTGATTAATT 50 22075157 0.710011617 13 49 471 0.959459459 1.851258349 0.094594595 0.38 0.581081081 50 3 0 71 3L:22075113-22075172 6 39 2468 FBgn0037151 176 32.25666667 49.12666667 0.221590909 1.209052392 0.793866196 2 1 1.5 0.1 dme-miR-92b-3p 7mer-A1 TGCAATA 3L 22257836 22257842 - 3L_22257836_22257842_- 0.782911796 0.782911781 0.782911789 0 Rich FBtr0078512 22257747 22258138 3L - 22257823 22257902 3'utr Rich FlyBase G39171.1 AACCGTAAAACCGTATGAAGCATACGCAACGTAATCCATAATTTAGTAGATGAAATTTGCTGCAATATTTGTTAATTAAA 15 22257846 0.984044994 9 15 129 1 1.230448921 0.176470588 0.066666667 0.176470588 15 0 0 17 3L:22257823-22257902 7 Rich FBtr0078512 22257747 22258138 TGCAATA 7mer-A1 dme-miR-92b-3p 3L - 22257824 22257858 3'utr Rich FlyBase G29578.1 AGTAGATGAAATTTGCTGCAATATTTGTTAATTAA 6 22257846 0.786487377 3 6 57 1 1.113943352 0 0.5 0.769230769 6 0 0 13 3L:22257824-22257858 7 8 2469 FBgn0028500 540.74 13.42666667 20.61333333 0.014794541 0.595829196 0.388098318 4 4 4 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3L 22265808 22265814 - 3L_22265808_22265814_- 0.521223855 0.521223845 0.52122385 7.07E-08 CG11523 FBtr0078511 22265804 22266077 3L - 22265799 22265866 3'utr CG11523 FlyBase G39183.1 AAATGTCGCTCCAGATCCGCGTTAGACCTTAAGACGTTTCAAGAATAAAGATTGTGATTGCAACTCTA 173 22265815 0.650947509 11 163 988 0.947136564 1.55428721 0.061674009 0.231213873 0.414096916 173 7 5 215 3L:22265799-22265866 7 CG11523 FBtr0078511 22265804 22266077 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 22265799 22265880 3'utr CG11523 FlyBase G29587.1 CTTGCATAGCAAACAAATGTCGCTCCAGATCCGCGTTAGACCTTAAGACGTTTCAAGAATAAAGATTGTGATTGCAACTCTA 118 22265815 0.826435357 9 114 669 0.97826087 1.77815125 0.076086957 0.43220339 0.635869565 118 2 2 180 3L:22265799-22265880 7 139 2470 FBgn0037156 234.9133333 34.43333333 53.07666667 0.59170758 4.03678606 2.618853231 1 1 1 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA 3L 22265904 22265909 + 3L_22265904_22265909_+ 0.999714909 0.999705234 0.999710072 6.86E-06 Ddx1 FBtr0078492 22265844 22266017 3L + 22265848 22265940 3'utr Ddx1 FlyBase G32325.1 CGGATCTGGAGCGACATTTGTTTGCTATGCAAGGAAAGGATGTGGTGAATTGAGAAGTGCAAGACCAACTCACGCGGAAATACTTTTGCGGCA 43 22265905 0.988503108 4 42 230 0.97826087 1.653212514 0.304347826 0.069767442 0.130434783 43 1 0 45 3L:22265848-22265940 6 Ddx1 FBtr0078492 22265844 22266017 GTGCAA 6mer3-8 dme-miR-92b-3p 3L + 22265863 22265927 3'utr Ddx1 FlyBase G24432.1 ATTTGTTTGCTATGCAAGGAAAGGATGTGGTGAATTGAGAAGTGCAAGACCAACTCACGCGGAAA 19 22265905 0.995590542 3 19 90 1 1.531478917 0.176470588 0.526315789 0.735294118 19 0 0 34 3L:22265863-22265927 6 18 2471 FBgn0015075 283.7533333 13.87333333 21.15666667 0.063435378 1.297453148 0.850795651 -1 -1 -1 0.1 dme-miR-2535b-3p 7mer-m1 CGTGAGT 3L 22265915 22265921 - 3L_22265915_22265921_- 0.762411133 0.764909593 0.763660363 0.001766706 CG11523 FBtr0078511 22265804 22266077 3L - 22265875 22265997 3'utr CG11523 FlyBase G39184.1 ATTTTTAATAGCAGAGCTTGAGCTCCGACTTCCTACATATACAAAATTGTGTGTTTGTGCCGCAAAAGTATTTCCGCGTGAGTTGGTCTTGCACTTCTCAATTCACCACATCCTTTCCTTGCA 30 22265926 0.982738753 17 28 211 0.944444444 1.531478917 0.111111111 0.166666667 0.305555556 30 2 0 34 3L:22265875-22265997 7 CG11523 FBtr0078511 22265804 22266077 CGTGAGT 7mer-m1 dme-miR-2535b-3p 3L - 22265911 22265940 3'utr CG11523 FlyBase G29588.1 TGCCGCAAAAGTATTTCCGCGTGAGTTGGT 5 22265925 0.733806221 2 4 26 1 0.954242509 0.111111111 0.4 0.666666667 5 0 0 9 3L:22265911-22265940 7 7 2472 FBgn0037156 234.9133333 34.43333333 53.07666667 0.029798223 0.203291384 0.131884695 5 4 4.5 0.1 dme-miR-282-5p 6mer2-7 GAGGCT 3L 22266046 22266051 - 3L_22266046_22266051_- 0.997475144 0.991593679 0.994534412 0.004158778 CG11523 FBtr0078511 22265804 22266077 3L - 22266004 22266076 3'utr CG11523 FlyBase G39185.1 GGTAACCGGACTCCAGCTTTCAAACGAGGCTGTTTACTCTTTAGACAGACGATTTTAATGTTAGTTTAATTAA 23 22266043 0.684492009 11 23 169 1 1.462397998 0.24137931 0.260869565 0.413793103 23 0 0 29 3L:22266004-22266076 6 CG11523 FBtr0078511 22265804 22266077 GAGGCT 6mer2-7 dme-miR-282-5p 3L - 22266028 22266084 stop_codon CG11523 FlyBase G29589.1 GAAGTGACGGTAACCGGACTCCAGCTTTCAAACGAGGCTGTTTACTCTTTAGACAGA 13 22266043 0.923026395 7 12 84 0.9 1.255272505 0.15 0.384615385 0.6 13 2 0 18 3L:22266028-22266084 6 15 2473 FBgn0037156 234.9133333 34.43333333 53.07666667 0.063853336 0.435624395 0.282610061 -8 -8 -8 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3L 22272942 22272947 + 3L_22272942_22272947_+ 0.999861182 0.638694728 0.819277955 0.255383281 Csp FBtr0078493|FBtr0078495|FBtr0344983|FBtr0334747|FBtr0078494 22271769|22272390|22272390|22271769|22272390 22273745|22273745|22273298|22273745|22273298 3L + 22272895 22272965 3'utr Csp FlyBase G32338.1 TCGCGAAGAGAGGCACTGTAATTATATATATGTATATGATATGTGTATCTAGTTTGTGGCATTTGTGTCGT 10 22272948 0.991945728 6 10 110 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 3L:22272895-22272965 6 Csp FBtr0334747|FBtr0078494|FBtr0344983|FBtr0078493|FBtr0078495 22271769|22272390|22272390|22271769|22272390 22273745|22273298|22273298|22273745|22273745 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 22272924 22273015 3'utr Csp FlyBase G24440.1 ATGTATATGATATGTGTATCTAGTTTGTGGCATTTGTGTCGTCGCTTAGTCTAGCTAATTTGTTCTCGAGATCTCCTCTTCACCGATTGTTT 16 22272949 0.976955482 8 15 171 0.92 0.884606581 0.2 0.4375 0.64 16 0 2 23 3L:22272924-22273015 6 8.5 2474 FBgn0004179 1541.363333 81.29333333 124.7033333 0.005514599 0.104559619 0.068161771 -6 -7 -6.5 0.1 dme-miR-33-5p 6mer2-7 AATGCA 3L 22293179 22293184 - 3L_22293179_22293184_- 0.999654819 0.566574218 0.783114519 0.306234229 Ten-m FBtr0078509 22293042 22295587 3L - 22293047 22293427 3'utr Ten-m FlyBase G39206.1 GGTCCTCTGTTCTTAAAATACTTTGATCTGTACATTTTCAGGATGGGGCAAAAGCTTAACCTACTTAATTAGTTGAGATCATGATTAGGCATATTAACTGACTAACGAAAAAGGCCAGTCCGTTAAGGCAGTTTGAGCATACATAAATTGCGAACAATAATTGTATTTAATGTACGAAATTGTCTTTAAAATATATGGATACCGAGAGAAGTGCAGAGGGTATAGGCTATAAATTACAAATCGAATGCAGACAACAAAGACAATTGTACACAAAGAAATAATTATGGCAAGCCGATATACATACATGATAAAACATCCATATAAATATATATAATAACTAATAATATTACGAGTAAAAAGCGATTTCAATAAAAATGAAAA 175 22293205 0.925795772 47 167 966 0.962264151 1.610660163 0.179245283 0.16 0.306603774 175 4 4 204 3L:22293047-22293427 6 Ten-m FBtr0078509 22293042 22295587 AATGCA 6mer2-7 dme-miR-33-5p 3L - 22293151 22293236 3'utr Ten-m FlyBase G29609.1 TATATGGATACCGAGAGAAGTGCAGAGGGTATAGGCTATAAATTACAAATCGAATGCAGACAACAAAGACAATTGTACACAAAGAA 39 22293205 0.878572998 10 39 143 1 1.763427994 0.155172414 0.41025641 0.603448276 39 0 0 58 3L:22293151-22293236 6 18.5 2475 FBgn0004449 644.2766667 6.713333333 10.31666667 0.028714372 2.75571003 1.793214863 21 21 21 0.1 dme-bantam-3p 6mer3-8 TGATCT 3L 22293399 22293404 - 3L_22293399_22293404_- 0.999886692 0.999986794 0.999936743 7.08E-05 Ten-m FBtr0078509 22293042 22295587 3L - 22293047 22293427 3'utr Ten-m FlyBase G39206.1 GGTCCTCTGTTCTTAAAATACTTTGATCTGTACATTTTCAGGATGGGGCAAAAGCTTAACCTACTTAATTAGTTGAGATCATGATTAGGCATATTAACTGACTAACGAAAAAGGCCAGTCCGTTAAGGCAGTTTGAGCATACATAAATTGCGAACAATAATTGTATTTAATGTACGAAATTGTCTTTAAAATATATGGATACCGAGAGAAGTGCAGAGGGTATAGGCTATAAATTACAAATCGAATGCAGACAACAAAGACAATTGTACACAAAGAAATAATTATGGCAAGCCGATATACATACATGATAAAACATCCATATAAATATATATAATAACTAATAATATTACGAGTAAAAAGCGATTTCAATAAAAATGAAAA 175 22293405 0.925795772 47 167 966 0.962264151 1.610660163 0.179245283 0.16 0.306603774 175 4 4 204 3L:22293047-22293427 6 Ten-m FBtr0078509 22293042 22295587 TGATCT 6mer3-8 dme-bantam-3p 3L - 22293285 22293485 3'utr Ten-m FlyBase G29611.1 AGATACCAAGCGGATGCCGTTGTCGAGCTCGACTGTGCTTCATCTCGTACATACCCCAGGTCCTCTGTTCTTAAAATACTTTGATCTGTACATTTTCAGGATGGGGCAAAAGCTTAACCTACTTAATTAGTTGAGATCATGATTAGGCATATTAACTGACTAACGAAAAAGGCCAGTCCGTTAAGGCAGTTTGAGCATACA 61 22293405 0.981324038 28 57 412 0.956043956 1.638489257 0.065934066 0.327868852 0.549450549 61 3 1 87 3L:22293285-22293485 6 22.5 2476 FBgn0004449 644.2766667 6.713333333 10.31666667 0.034922885 3.351539225 2.180936995 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 22294462 22294468 - 3L_22294462_22294468_- 0.631473105 0.607244465 0.619358785 0.017132207 Ten-m FBtr0306107|FBtr0306107|FBtr0306107|FBtr0330159|FBtr0330159|FBtr0330159|FBtr0078509|FBtr0078509|FBtr0078509 22293982|22293982|22293982|22293982|22293982|22293982|22293042|22293042|22293042 22295587|22295587|22295587|22295431|22295431|22295431|22295587|22295587|22295587 3L - 22294384 22295099 3'utr Ten-m FlyBase G39208.2 ACGGTGCGTATTATTTAGATTGGTCCATTAACCGATTTTGGTCGAGACAAGAGTGCATAGATCAAACCAATACGAACGGAATGATCTCGCTTGTTTCGGAAATTGGAGTTAGGACAAACACAGGCCAACAAGCCAGTTGCATTACGATGTCAAACGATGAGTATTACACAGCAAATTATGCATACGATAAGTACAGATGTTAAACTACGAAATGAATAAATGTAAAAAGATTAAAGTTCTGCATAGTAGCTCCCTAGTCTTTGGTCCAAACCTGGACTCTTTCCAACACAGCCCACTCTCAAATGGCAACAGAAATGTTGATCGCTGCTTAACCTACTTCTTCATAATTGCTCTGTGTATATACGAACGAATACTTTTCAAGCCTCCACTGACGAAAAAGCGCGTATCCTTTATCCTAACACTCATTTTAGCGAAATAGGTCTCTAAGCCGAATGCTCGAATTTAAATTTAATAGACGCGTCTACCTAATTTGGATAGCCAAGAATCAAAAGGAATTTTTATCAGTCCCCTTTCAATGCAATACAATACTCTAACGACTCTTTTCACTCATTTTATAATGTTAGCTGTTGAATTTATTCAAAGGAAAACGCATTAAAAACTTTTTACAAATTGTGATATATATTTCTAAACATTTCATTTGACAACTTGAAGTGTAGCGAAGAAAAACTCGAATTAACTCAAATCGAACCGAAAGT 1837 22294469 0.972993216 142 1734 16945 0.945722171 1.721958503 0.072217111 0.151333696 0.282888684 1837 80 38 2056 3L:22294384-22295099 7 Ten-m FBtr0078509|FBtr0078509|FBtr0078509|FBtr0330159|FBtr0330159|FBtr0330159|FBtr0306107|FBtr0306107|FBtr0306107 22293042|22293042|22293042|22293982|22293982|22293982|22293982|22293982|22293982 22295587|22295587|22295587|22295431|22295431|22295431|22295587|22295587|22295587 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 22294385 22294866 3'utr Ten-m FlyBase G29615.1 AAGTTCTGCATAGTAGCTCCCTAGTCTTTGGTCCAAACCTGGACTCTTTCCAACACAGCCCACTCTCAAATGGCAACAGAAATGTTGATCGCTGCTTAACCTACTTCTTCATAATTGCTCTGTGTATATACGAACGAATACTTTTCAAGCCTCCACTGACGAAAAAGCGCGTATCCTTTATCCTAACACTCATTTTAGCGAAATAGGTCTCTAAGCCGAATGCTCGAATTTAAATTTAATAGACGCGTCTACCTAATTTGGATAGCCAAGAATCAAAAGGAATTTTTATCAGTCCCCTTTCAATGCAATACAATACTCTAACGACTCTTTTCACTCATTTTATAATGTTAGCTGTTGAATTTATTCAAAGGAAAACGCATTAAAAACTTTTTACAAATTGTGATATATATTTCTAAACATTTCATTTGACAACTTGAAGTGTAGCGAAGAAAAACTCGAATTAACTCAAATCGAACCGAAAG 1034 22294469 0.971539297 102 973 9482 0.942743009 1.808640573 0.05792277 0.34622824 0.549933422 1034 65 21 1416 3L:22294385-22294866 7 817.5 2477 FBgn0004449 644.2766667 6.713333333 10.31666667 1.268864825 121.7725919 79.24071082 1 1 1 0.1 dme-miR-970-3p 7mer-m8 TCTTATG 3L 22295238 22295244 - 3L_22295238_22295244_- 0.658999339 0.658999343 0.658999341 0 Ten-m FBtr0306107|FBtr0330159|FBtr0078509 22293982|22293982|22293042 22295587|22295431|22295587 3L - 22295192 22295351 3'utr Ten-m FlyBase G39210.1 AAAAACAAAGGAAAAGCAAGCATTGAACACACTAATTAATATAAACTTTAATCATGCTTAAAGTTTAGTATTAGCCACAACGCAACCCTCGAATAACCGAAGAAACTTCTTATGTGTACACTGGAACAGAAATATGTATGTTGATGTTGAGTTTAGGCGT 113 22295245 0.979799473 20 80 548 0.73015873 1.185636577 0.23015873 0.097345133 0.19047619 113 29 5 92 3L:22295192-22295351 7 Ten-m FBtr0078509|FBtr0330159|FBtr0306107 22293042|22293982|22293982 22295587|22295431|22295587 TCTTATG 7mer-m8 dme-miR-970-3p 3L - 22295047 22295302 3'utr Ten-m FlyBase G29618.1 AATCATGCTTAAAGTTTAGTATTAGCCACAACGCAACCCTCGAATAACCGAAGAAACTTCTTATGTGTACACTGGAACAGAAATATGTATGTTGATGTTGAGTTTAGGCGTATGTTTAGTCCATGTGTGTAATGTTAAATGTAATTTTTTAAATCAGAATCAGTGTCCCCACGGGCAATCAGCTTGCAATGGCATTTTACGCCACGGTGCGTATTATTTAGATTGGTCCATTAACCGATTTTGGTCGAGACAAGAG 82 22295244 0.973551237 36 75 469 0.893442623 1.736396502 0.114754098 0.317073171 0.540983607 82 12 1 109 3L:22295047-22295302 7 39 2478 FBgn0004449 644.2766667 6.713333333 10.31666667 0.060533001 5.809334657 3.780290792 1 0 0.5 0.1 dme-miR-13b-2-5p 7mer-A1 TTGACGA 3L 22295445 22295451 - 3L_22295445_22295451_- 0.782864304 0.776138615 0.779501459 0.004755788 Ten-m FBtr0306107|FBtr0078509 22293982|22293042 22295587|22295587 3L - 22295402 22295607 stop_codon Ten-m FlyBase G39211.1 TCGGCGAGCTGAGTGCGTGAGTGGAGGCATATAGAGAGAAGCTGGTGGCGGAGACGAAGCCAGAGGAGAGTGACATGACCGACGAAGAATACGGTGACCAGGAGGACTACCTAATTGCCGTGGGCAAAATGGAGCCAAGGGACAGCAGTGAGGCACTTGACGAGCAGATTTTGTAATTAGGTGAAATGCGCAACAGCGACCACAAG 157 22295459 0.912616298 27 153 495 0.968586387 2.267171728 0.298429319 0.159235669 0.308900524 157 6 0 185 3L:22295402-22295607 7 Ten-m FBtr0078509|FBtr0306107 22293042|22293982 22295587|22295587 TTGACGA 7mer-A1 dme-miR-13b-2-5p 3L - 22295406 22295604 stop_codon Ten-m FlyBase G29620.1 GCGAGCTGAGTGCGTGAGTGGAGGCATATAGAGAGAAGCTGGTGGCGGAGACGAAGCCAGAGGAGAGTGACATGACCGACGAAGAATACGGTGACCAGGAGGACTACCTAATTGCCGTGGGCAAAATGGAGCCAAGGGACAGCAGTGAGGCACTTGACGAGCAGATTTTGTAATTAGGTGAAATGCGCAACAGCGACCA 111 22295439 0.930338078 21 103 388 0.928571429 1.926856709 0.274725275 0.477477477 0.681318681 111 12 1 169 3L:22295406-22295604 7 56.5 2479 FBgn0004449 644.2766667 6.713333333 10.31666667 0.087695245 8.416087388 5.476575121 8 -12 -2 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 225534 225541 + 3L_225534_225541_+ 0.316479838 0.330468384 0.323474111 0.009891434 CG33229 FBtr0072499|FBtr0345592 224756|224756 225605|225605 3L + 225444 225577 3'utr CG33229 FlyBase G26725.1 ACGGTTCATATTGAATCACTAGCGCTAGAAAACGGGCAATATTGCAAAGTAAACGAGTGAAAGTCGAAAACCCAACTATTAACTGTAAATGTACTTAAAGTAAGCATACAGAACTGATATTTGATAAAACCTAA 296 225533 0.975595691 19 279 1766 0.940860215 2.06694679 0.129032258 0.202702703 0.365591398 296 20 2 350 3L:225444-225577 8 CG33229 FBtr0345592|FBtr0072499 224756|224756 225605|225605 GTACTTAA 8mer-A1 dme-miR-252-5p 3L + 225446 225582 3'utr CG33229 FlyBase G20211.1 GGTTCATATTGAATCACTAGCGCTAGAAAACGGGCAATATTGCAAAGTAAACGAGTGAAAGTCGAAAACCCAACTATTAACTGTAAATGTACTTAAAGTAAGCATACAGAACTGATATTTGATAAAACCTAAAATAA 212 225533 0.973680409 18 201 1220 0.942073171 1.790988475 0.057926829 0.386792453 0.603658537 212 15 4 309 3L:225446-225582 8 84.5 2480 FBgn0053229 390.9566667 32.02 49 0.216136486 2.63897564 1.724489796 1 1 1 0.1 dme-miR-283-5p 8mer-m1 TGATATTT 3L 225558 225565 + 3L_225558_225565_+ 0.435319515 0.424853565 0.43008654 0.007400509 CG33229 FBtr0072499|FBtr0345592 224756|224756 225605|225605 3L + 225444 225577 3'utr CG33229 FlyBase G26725.1 ACGGTTCATATTGAATCACTAGCGCTAGAAAACGGGCAATATTGCAAAGTAAACGAGTGAAAGTCGAAAACCCAACTATTAACTGTAAATGTACTTAAAGTAAGCATACAGAACTGATATTTGATAAAACCTAA 296 225533 0.975595691 19 279 1766 0.940860215 2.06694679 0.129032258 0.202702703 0.365591398 296 20 2 350 3L:225444-225577 8 CG33229 FBtr0345592|FBtr0072499 224756|224756 225605|225605 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 225446 225582 3'utr CG33229 FlyBase G20211.1 GGTTCATATTGAATCACTAGCGCTAGAAAACGGGCAATATTGCAAAGTAAACGAGTGAAAGTCGAAAACCCAACTATTAACTGTAAATGTACTTAAAGTAAGCATACAGAACTGATATTTGATAAAACCTAAAATAA 212 225533 0.973680409 18 201 1220 0.942073171 1.790988475 0.057926829 0.386792453 0.603658537 212 15 4 309 3L:225446-225582 8 130.5 2481 FBgn0053229 390.9566667 32.02 49 0.333796584 4.075577764 2.663265306 25 25 25 0.1 dme-miR-305-5p 8mer-A1 AGTACAAA 3L 2258697 2258704 + 3L_2258697_2258704_+ 0.603352802 0.605574753 0.604463777 0.001571191 CG2034 FBtr0072877|FBtr0332664 2258672|2258672 2258922|2258922 3L + 2258656 2258801 stop_codon CG2034 FlyBase G27270.1 GAGGATCTGTGCATCTAGGCTGCCCGCCAGCAGCGAACGGCAGTACAAATAGCCTTGGCTTTAAGTCTCCTTAAGTCTAACCTACTAAAACCATAAAATACCTGGAATTCCGGCCCCAAAGTTCCGCCTAGGGGTGTGTTCAACCT 99 2258710 0.817849275 16 98 561 0.98245614 2.049218023 0.157894737 0.131313131 0.245614035 99 2 0 112 3L:2258656-2258801 8 CG2034 FBtr0072877|FBtr0332664 2258672|2258672 2258922|2258922 AGTACAAA 8mer-A1 dme-miR-305-5p 3L + 2258683 2258734 3'utr CG2034 FlyBase G20642.1 CAGCAGCGAACGGCAGTACAAATAGCCTTGGCTTTAAGTCTCCTTAAGTCTA 34 2258710 0.968762948 4 33 216 0.963636364 1.72427587 0 0.441176471 0.654545455 34 2 0 53 3L:2258683-2258734 8 42 2482 FBgn0015359 300.1033333 32.34333333 49.50333333 0.139951794 1.298567453 0.848427715 -13 -13 -13 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 2259195 2259201 - 3L_2259195_2259201_- 0.784830985 0.781378849 0.783104917 0.002441074 oxt FBtr0072904|FBtr0072904|FBtr0072904 2258837|2258837|2258837 2259328|2259328|2259328 3L - 2259133 2259220 3'utr oxt FlyBase G33658.1 ATGTTTTCGTATAGATTGTTGTGATAATGTGAACTTTTAAGCGCCATTTTGACCGGAAGCGGAACTCCGCCGCTCCAATTGTATTTGA 61 2259204 0.98681453 15 56 527 0.927536232 1.329058719 0.31884058 0.098360656 0.202898551 61 3 2 64 3L:2259133-2259220 7 oxt FBtr0072904|FBtr0072904|FBtr0072904 2258837|2258837|2258837 2259328|2259328|2259328 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 2259151 2259223 3'utr oxt FlyBase G25452.1 TCGATGTTTTCGTATAGATTGTTGTGATAATGTGAACTTTTAAGCGCCATTTTGACCGGAAGCGGAACTCCGC 30 2259204 0.987907542 10 28 248 0.93877551 1.662757832 0.346938776 0.4 0.632653061 30 3 0 46 3L:2259151-2259223 7 30 2483 FBgn0015360 414.5533333 14.81333333 22.68333333 0.072367046 2.02520252 1.322556943 3 3 3 0.1 dme-miR-12-5p 7mer-m8 AATACTC 3L 2259281 2259287 - 3L_2259281_2259287_- 0.674512714 0.674512417 0.674512565 2.12E-07 oxt FBtr0072904 2258837 2259328 3L - 2259255 2259296 3'utr oxt FlyBase G33659.1 TCTAGTGTAAATACTCGCCAAGATTTAGATGTCGAACCGCAA 10 2259285 0.966964605 2 10 57 1 1 0 0 0 10 0 0 10 3L:2259255-2259296 7 oxt FBtr0072904 2258837 2259328 AATACTC 7mer-m8 dme-miR-12-5p 3L - 2259248 2259295 3'utr oxt FlyBase G25453.1 CTAGTGTAAATACTCGCCAAGATTTAGATGTCGAACCGCAATTAACGA 16 2259285 0.958329289 2 15 73 1 1.380211242 0 0.25 0.5 16 0 0 24 3L:2259248-2259295 7 12.5 2484 FBgn0015360 414.5533333 14.81333333 22.68333333 0.030152936 0.843834383 0.551065393 -2 -2 -2 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 3L 22714513 22714519 - 3L_22714513_22714519_- 0.620203065 0.620187581 0.620195323 1.10E-05 ArfGAP3 FBtr0330174|FBtr0330173|FBtr0330175|FBtr0078540|FBtr0078539|FBtr0113186|FBtr0331775 22714406|22714406|22714406|22714406|22714311|22714406|22714406 22714943|22714943|22714943|22714943|22714943|22714943|22714943 3L - 22714491 22714529 3'utr ArfGAP3 FlyBase G39308.1 AATTACAATTTGCATTTCGGCTGGGCAGCTTTTAATTTT 5 22714520 0.983505365 2 5 39 1 0.84509804 0.142857143 0.2 0.428571429 5 0 0 7 3L:22714491-22714529 7 ArfGAP3 FBtr0078540|FBtr0330175|FBtr0330173|FBtr0330174|FBtr0331775|FBtr0113186|FBtr0078539 22714406|22714406|22714406|22714406|22714406|22714406|22714311 22714943|22714943|22714943|22714943|22714943|22714943|22714943 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 22714488 22714536 3'utr ArfGAP3 FlyBase G29691.1 GTTTTGAAATTACAATTTGCATTTCGGCTGGGCAGCTTTTAATTTTTTC 6 22714519 0.963016922 4 6 57 1 0.954242509 0.111111111 0.333333333 0.555555556 6 0 0 9 3L:22714488-22714536 7 4.5 2485 FBgn0037182 511.4866667 25.40666667 39.02333333 0.008797883 0.177118866 0.115315623 1 0 0.5 0.1 dme-miR-995-5p 7mer-A1 ATTCGGA 3L 22727375 22727381 - 3L_22727375_22727381_- 0.782717754 0.782910792 0.782814273 0.000136472 CG14450 FBtr0310503 22726232 22727477 3L - 22727328 22727396 3'utr CG14450 FlyBase G39328.1 CCTGTATGTGGAGGGATTCGGACTGAAGGTGACCACCAAGTTCTTTAAGAGTCTGCTTGCGCCGCCGAG 13 22727379 0.981958413 4 12 84 0.923076923 1.079181246 0.307692308 0 0 13 1 0 12 3L:22727328-22727396 7 CG14450 FBtr0310503 22726232 22727477 ATTCGGA 7mer-A1 dme-miR-995-5p 3L - 22727362 22727390 3'utr CG14450 FlyBase G29705.1 TGTGGAGGGATTCGGACTGAAGGTGACCA 5 22727380 0.721748275 3 4 19 0.875 0.84509804 0.625 0.4 0.625 5 1 0 7 3L:22727362-22727390 7 7.5 2486 FBgn0037184 120.6666667 9.83 15.03666667 0.062154696 0.762970498 0.498780758 -2 -1 -1.5 0.1 dme-miR-304-5p 6mer3-8 TGAGAT 3L 22733303 22733308 + 3L_22733303_22733308_+ 1 0.994644614 0.997322307 0.00378684 CG11367 FBtr0078528 22733038 22733446 3L + 22733285 22733327 3'utr CG11367 FlyBase G32386.1 ATTACTTCTAAGAATTCCTGAGATGTACATTTATAAATAAGTC 10 22733315 0.98247389 4 10 83 1 1 0 0 0 10 0 0 10 3L:22733285-22733327 6 CG11367 FBtr0078528 22733038 22733446 TGAGAT 6mer3-8 dme-miR-304-5p 3L + 22733294 22733321 3'utr CG11367 FlyBase G24475.1 AAGAATTCCTGAGATGTACATTTATAAA 5 22733315 0.675238928 4 5 39 1 0.954242509 0 0.6 0.777777778 5 0 0 9 3L:22733294-22733321 6 7 2487 FBgn0037185 167.9933333 11.46666667 17.67 0.04166832 0.610465116 0.396151669 -12 -12 -12 0.1 dme-miR-184-5p 6mer3-8 TGATAA 3L 22738872 22738877 - 3L_22738872_22738877_- 0.999999982 0.999538953 0.999769467 0.000325976 l(3)04053 FBtr0078535 22738600 22739100 3L - 22738869 22738912 3'utr l(3)04053 FlyBase G39329.1 ATGTGAGAATCAAAGCGCAAACTCGTGATGTTGGTTGATAAAGC 33 22738882 0.73907171 6 27 177 0.846153846 1.217483944 0.179487179 0.121212121 0.256410256 33 5 1 33 3L:22738869-22738912 6 l(3)04053 FBtr0078535 22738600 22739100 TGATAA 6mer3-8 dme-miR-184-5p 3L - 22738869 22738959 3'utr l(3)04053 FlyBase G29706.1 GTTGCATTGGGTTATATTTGGTGGGAAAATTAAGGGAGGGATGGGCAATGTGAGAATCAAAGCGCAAACTCGTGATGTTGGTTGATAAAGC 32 22738882 0.839916498 11 28 172 0.86 1.633468456 0.26 0.46875 0.66 32 7 0 43 3L:22738869-22738959 6 8.5 2488 FBgn0010830 273 13.44666667 20.59666667 0.031135531 0.632126921 0.412688137 5 5 5 0.1 dme-miR-1007-3p 7mer-m8 TGAGCTT 3L 22739004 22739010 - 3L_22739004_22739010_- 0.601513378 0.510985425 0.556249402 0.064012963 l(3)04053 FBtr0078535 22738600 22739100 3L - 22738958 22739046 3'utr l(3)04053 FlyBase G39330.1 TTTTCTGTGTAAACACTGTATCCCACGACTTCGCATTGAGCTTGTTTTTAGATGACCCCGCAAACATTTTATGTTTCCGTATTATCTGT 12 22739010 0.985792133 4 11 103 1 1.146128036 0.071428571 0.166666667 0.285714286 12 0 0 14 3L:22738958-22739046 7 l(3)04053 FBtr0078535 22738600 22739100 TGAGCTT 7mer-m8 dme-miR-1007-3p 3L - 22738993 22739049 3'utr l(3)04053 FlyBase G29707.1 TTGTTTTCTGTGTAAACACTGTATCCCACGACTTCGCATTGAGCTTGTTTTTAGATG 11 22739010 0.80586764 6 11 101 1 1.113943352 0.307692308 0.181818182 0.307692308 11 0 0 13 3L:22738993-22739049 7 7 2489 FBgn0010830 273 13.44666667 20.59666667 0.025641026 0.520575112 0.339860819 0 0 0 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 22747952 22747958 + 3L_22747952_22747958_+ 0.646525221 0.639638968 0.643082095 0.004869279 CG7369 FBtr0078530 22747716 22748614 3L + 22747938 22747969 3'utr CG7369 FlyBase G32401.1 ATTTCCGTTATCTTTGTGTTCCTGTTCCAAAT 77 22747951 0.707693543 6 76 831 0.99122807 2.053078443 0.105263158 0.38961039 0.587719298 77 1 0 113 3L:22747938-22747969 7 CG7369 FBtr0078530 22747716 22748614 TGTGTTC 7mer-m8 dme-miR-317-3p 3L + 22747938 22747972 3'utr CG7369 FlyBase G24485.1 ATTTCCGTTATCTTTGTGTTCCTGTTCCAAATTTG 62 22747951 0.707773385 6 61 674 1 1.995635195 0.181818182 0.435483871 0.646464646 62 0 0 99 3L:22747938-22747972 7 69 2490 FBgn0037188 267.3333333 8.483333333 12.97666667 0.258104738 8.133595285 5.317236065 1 1 1 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 22748070 22748077 + 3L_22748070_22748077_+ 0.500095784 0.500095479 0.500095632 2.12E-07 CG7369 FBtr0078530 22747716 22748614 3L + 22748031 22748103 3'utr CG7369 FlyBase G32403.1 TTAATTAGACCATTGGGAGGATGGGAATAATGAAAGAATGTACTTAAGGCCGTACACGGCTAACAGCTAATGC 492 22748069 0.872856392 8 483 2403 0.984293194 2.751279104 0.139616056 0.16122449 0.282722513 490 9 0 564 3L:22748031-22748103 8 CG7369 FBtr0078530 22747716 22748614 GTACTTAA 8mer-A1 dme-miR-252-5p 3L + 22748037 22748100 3'utr CG7369 FlyBase G24486.1 AGACCATTGGGAGGATGGGAATAATGAAAGAATGTACTTAAGGCCGTACACGGCTAACAGCTAA 271 22748069 0.87474947 6 267 1316 0.995098039 2.608526034 0.137254902 0.357933579 0.573529412 271 2 0 406 3L:22748037-22748100 8 376 2491 FBgn0037188 267.3333333 8.483333333 12.97666667 1.406483791 44.32220039 28.97508348 1 1 1 0.1 dme-miR-8-3p 7mer-m8 CAGTATT 3L 22748217 22748223 + 3L_22748217_22748223_+ 0.661615243 0.66161522 0.661615232 0 CG7369 FBtr0078530 22747716 22748614 3L + 22748170 22748231 3'utr CG7369 FlyBase G32404.1 AAACCAATCTGACAAAGCTACATGAGTACGCGATATCCGTACGTGACCAGTATTTATATTTA 14 22748224 0.751754552 11 14 84 1 1.230448921 0.117647059 0.214285714 0.352941176 14 0 0 17 3L:22748170-22748231 7 CG7369 FBtr0078530 22747716 22748614 CAGTATT 7mer-m8 dme-miR-8-3p 3L + 22748185 22748227 3'utr CG7369 FlyBase G24487.1 AGCTACATGAGTACGCGATATCCGTACGTGACCAGTATTTATA 13 22748222 0.789043986 8 12 75 0.863636364 1.278753601 0 0.384615385 0.636363636 13 3 0 19 3L:22748185-22748227 7 9 2492 FBgn0037188 267.3333333 8.483333333 12.97666667 0.033665835 1.060903733 0.69355253 -7 -5 -6 0.1 dme-miR-282-5p 6mer2-7 GAGGCT 3L 22748323 22748328 + 3L_22748323_22748328_+ 1 0.999999728 0.999999864 2.12E-07 CG7369 FBtr0078530 22747716 22748614 3L + 22748297 22748344 3'utr CG7369 FlyBase G32405.1 AACGGATTTCATTCTGATTCTGTCTCGAGGCTTTTTGCATCAGCAACA 41 22748329 0.706988239 6 41 396 1 1.716003344 0.096153846 0.243902439 0.403846154 41 0 0 52 3L:22748297-22748344 6 CG7369 FBtr0078530 22747716 22748614 GAGGCT 6mer2-7 dme-miR-282-5p 3L + 22748307 22748344 3'utr CG7369 FlyBase G24488.1 ATTCTGATTCTGTCTCGAGGCTTTTTGCATCAGCAACA 24 22748330 0.628369442 7 24 229 1 1.568201724 0.189189189 0.375 0.594594595 24 0 0 37 3L:22748307-22748344 6 32.5 2493 FBgn0037188 267.3333333 8.483333333 12.97666667 0.121571072 3.831041257 2.504495248 -6 -7 -6.5 0.1 dme-miR-283-5p 8mer-A1 TGATATTA 3L 22748527 22748534 + 3L_22748527_22748534_+ 0.592192291 0.592138075 0.592165183 3.83E-05 CG7369 FBtr0078530 22747716 22748614 3L + 22748496 22748539 3'utr CG7369 FlyBase G32406.1 GATTTTGCAATATTGTGGATGAATTCATTATTGATATTAATTAT 7 22748525 0.989985562 5 7 69 1 0.84509804 0.142857143 0 0 7 0 0 7 3L:22748496-22748539 8 CG7369 FBtr0078530 22747716 22748614 TGATATTA 8mer-A1 dme-miR-283-5p 3L + 22748490 22748534 3'utr CG7369 FlyBase G24489.1 TTGCAAGATTTTGCAATATTGTGGATGAATTCATTATTGATATTA 6 22748523 0.993493826 4 5 62 0.833333333 0.698970004 0 0 0 6 1 0 5 3L:22748490-22748534 8 4.5 2494 FBgn0037188 267.3333333 8.483333333 12.97666667 0.016832918 0.530451866 0.346776265 2 4 3 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 3L 22784670 22784675 + 3L_22784670_22784675_+ 0.888995194 0.911891905 0.90044355 0.016190412 SPoCk FBtr0306600|FBtr0078533|FBtr0113437|FBtr0078531|FBtr0078532|FBtr0332105|FBtr0302134 22784486|22784486|22784486|22784486|22784486|22784486|22784486 22785235|22787631|22785235|22785235|22785235|22785235|22785235 3L + 22784632 22784701 3'utr SPoCk FlyBase G32421.1 GAGCGACGGACCAAGGATGTGTGTGTTTAATTTTACATTTGACTTGACCAATTAAGAATGATTTAATTGT 19 22784684 0.982139242 10 18 135 0.961538462 1.397940009 0.076923077 0.368421053 0.538461538 19 1 0 25 3L:22784632-22784701 6 SPoCk FBtr0302134|FBtr0332105|FBtr0078532|FBtr0078531|FBtr0113437|FBtr0078533|FBtr0306600 22784486|22784486|22784486|22784486|22784486|22784486|22784486 22785235|22785235|22785235|22785235|22785235|22787631|22785235 TTGACT 6mer3-8 dme-miR-1012-3p 3L + 22784616 22784695 3'utr SPoCk FlyBase G24497.1 GAAAAGCCGAAAATAAGAGCGACGGACCAAGGATGTGTGTGTTTAATTTTACATTTGACTTGACCAATTAAGAATGATTT 10 22784676 0.976309438 6 9 59 0.85 1.230448921 0.3 0.5 0.75 10 3 0 17 3L:22784616-22784695 6 7.5 2495 FBgn0052451 1200.69 35.10333333 53.84666667 0.006246408 0.213654924 0.139284388 -14 -6 -10 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 22785085 22785091 + 3L_22785085_22785091_+ 0.744448413 0.750400913 0.747424663 0.004209053 SPoCk FBtr0306600|FBtr0306600|FBtr0306600|FBtr0113437|FBtr0113437|FBtr0113437|FBtr0078531|FBtr0078531|FBtr0078531|FBtr0078532|FBtr0078532|FBtr0078532|FBtr0332105|FBtr0332105|FBtr0332105|FBtr0302134|FBtr0302134|FBtr0302134 22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486 22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235 3L + 22784943 22785114 3'utr SPoCk FlyBase G32424.1 TACAATGGGCTGCAAAGCTTTTTTTATTTAACTTTTATTTTCATTTTATCTCTAAGTGCTTCTCTAGTTTCTAATGCTCACCGCGCAATTTGAGTCAATATGAAGTGTTTAATAATCTACAATGTCGGCAAAAACTGTTTAATGTGATATTATTTTAAGCACATAAACCAGA 198 22785081 0.991691345 22 184 2018 0.940677966 1.568201724 0.084745763 0.151515152 0.288135593 198 9 5 222 3L:22784943-22785114 7 SPoCk FBtr0302134|FBtr0302134|FBtr0302134|FBtr0332105|FBtr0332105|FBtr0332105|FBtr0078532|FBtr0078532|FBtr0078532|FBtr0078531|FBtr0078531|FBtr0078531|FBtr0113437|FBtr0113437|FBtr0113437|FBtr0306600|FBtr0306600|FBtr0306600 22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486 22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 22785056 22785115 3'utr SPoCk FlyBase G24498.2 AATCTACAATGTCGGCAAAAACTGTTTAATGTGATATTATTTTAAGCACATAAACCAGAT 107 22785081 0.719970686 11 96 1054 0.89261745 1.220761654 0.067114094 0.289719626 0.489932886 107 9 7 133 3L:22785056-22785115 7 135.5 2496 FBgn0052451 1200.69 35.10333333 53.84666667 0.112851777 3.860032286 2.516404606 4 4 4 0.1 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 22786246 22786253 + 3L_22786246_22786253_+ 0.668734335 0.668734343 0.668734339 0 SPoCk FBtr0078533 22784486 22787631 3L + 22786198 22786275 3'utr SPoCk FlyBase G32425.1 GCTCACTCTGTCCGTCCGTATGTCTATCCGTATAAATGTAGAAATCTTGGCAGCTATAAAAGCTAGAGGTTAGGCATG 32 22786245 0.981636243 7 27 200 0.828571429 0.985276743 0.228571429 0.09375 0.171428571 32 4 2 29 3L:22786198-22786275 8 SPoCk FBtr0078533 22784486 22787631 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L + 22786197 22786272 3'utr SPoCk FlyBase G24500.1 TGCTCACTCTGTCCGTCCGTATGTCTATCCGTATAAATGTAGAAATCTTGGCAGCTATAAAAGCTAGAGGTTAGGC 19 22786245 0.973504655 4 19 119 1 1.477121255 0.433333333 0.526315789 0.7 19 0 0 30 3L:22786197-22786272 8 24.5 2497 FBgn0052451 1200.69 35.10333333 53.84666667 0.020404934 0.697939417 0.454995667 1 1 1 0.1 dme-miR-283-5p 6mer2-7 GATATT 3L 22786502 22786507 + 3L_22786502_22786507_+ 0.93471739 0.917844381 0.926280886 0.011931013 SPoCk FBtr0078533 22784486 22787631 3L + 22786496 22786525 3'utr SPoCk FlyBase G32426.1 AGTCGAGATATTGGACTTTAGCGTTTTCAT 8 22786507 0.757560801 2 8 64 1 1.041392685 0.272727273 0.375 0.545454545 8 0 0 11 3L:22786496-22786525 6 SPoCk FBtr0078533 22784486 22787631 GATATT 6mer2-7 dme-miR-283-5p 3L + 22786483 22786520 3'utr SPoCk FlyBase G24501.1 AACGGGTATTTATAGTCGAGATATTGGACTTTAGCGTT 10 22786507 0.873061912 3 10 76 1 1.176091259 0.133333333 0.4 0.6 10 0 0 15 3L:22786483-22786520 6 9 2498 FBgn0052451 1200.69 35.10333333 53.84666667 0.00749569 0.256385908 0.167141265 -5 -5 -5 0.1 dme-miR-12-5p 7mer-A1 ATACTCA 3L 22790253 22790259 - 3L_22790253_22790259_- 0.823349563 0.823349247 0.823349405 2.83E-07 jim FBtr0078582|FBtr0304985 22789231|22789231 22797911|22797911 3L - 22790212 22790310 3'utr jim FlyBase G39340.1 CGGAACAACACTAATCTCGGTCATTGCAAAATTGATTGCATAAAACAATGTATACTCAAGTCTTGGCAACTATTTAAAAAAAAATTCACGTTTAATTCC 23 22790262 0.974170267 7 23 141 1 1.431363764 0.148148148 0.173913043 0.296296296 23 0 0 27 3L:22790212-22790310 7 jim FBtr0304985|FBtr0078582 22789231|22789231 22797911|22797911 ATACTCA 7mer-A1 dme-miR-12-5p 3L - 22790214 22790268 3'utr jim FlyBase G29715.1 AAACAATGTATACTCAAGTCTTGGCAACTATTTAAAAAAAAATTCACGTTTAATT 11 22790247 0.976771395 5 11 70 1 1.230448921 0.058823529 0.454545455 0.647058824 11 0 0 17 3L:22790214-22790268 7 12.5 2499 FBgn0027339 2455.313333 43.04666667 66.12 0.005091 0.290382531 0.189050212 3 -12 -4.5 0.1 dme-miR-283-5p 8mer-m1 TGATATTT 3L 22796248 22796255 - 3L_22796248_22796255_- 0.544523982 0.555129463 0.549826723 0.007499221 jim FBtr0078582|FBtr0333212|FBtr0100184|FBtr0330076|FBtr0333213|FBtr0333211|FBtr0304985 22789231|22795975|22795975|22795975|22795975|22795975|22789231 22797911|22797911|22797911|22797557|22797911|22797911|22797911 3L - 22796176 22796348 5'utr jim FlyBase G39344.1 AGTTCTTCCCCTGCCAACTGTGTGGATATAATCGACAAATTTAGTTTCTTAACAAATTTTCCAATGTACCGTCAAAGCATTTATAACTGTTATTGATATTTTAGAATATGTTTCCTAAAAAGTATACATATTTTATGTATATGTAGAAAACACCGTGGAAGATAAGAAATTAT 75 22796284 0.99043153 22 68 691 0.914634146 1.176091259 0.024390244 0.093333333 0.170731707 75 3 4 75 3L:22796176-22796348 8 jim FBtr0333211|FBtr0304985|FBtr0330076|FBtr0333213|FBtr0100184|FBtr0078582|FBtr0333212 22795975|22789231|22795975|22795975|22795975|22789231|22795975 22797911|22797911|22797557|22797911|22797911|22797911|22797911 TGATATTT 8mer-m1 dme-miR-283-5p 3L - 22796212 22796357 5'utr jim FlyBase G29720.1 CACCATCTAAGTTCTTCCCCTGCCAACTGTGTGGATATAATCGACAAATTTAGTTTCTTAACAAATTTTCCAATGTACCGTCAAAGCATTTATAACTGTTATTGATATTTTAGAATATGTTTCCTAAAAAGTATACATATTTTATG 62 22796284 0.991149783 21 51 548 0.831168831 1.204119983 0.064935065 0.209677419 0.363636364 62 10 3 64 3L:22796212-22796357 8 27 2500 FBgn0027339 2455.313333 43.04666667 66.12 0.01099656 0.627226266 0.408348457 29 29 29 0.1 dme-miR-7-5p 7mer-m8 GTCTTCC 3L 22796627 22796633 - 3L_22796627_22796633_- 0.705950208 0.705950312 0.70595026 7.07E-08 jim FBtr0078582|FBtr0333212|FBtr0100184|FBtr0330076|FBtr0333213|FBtr0333211|FBtr0304985 22789231|22795975|22795975|22795975|22795975|22795975|22789231 22797911|22797911|22797911|22797557|22797911|22797911|22797911 3L - 22796595 22796671 5'utr jim FlyBase G39345.1 ATGAAACCTTAAGTACATTGACTTAGGATTCATTTGTTGTCTTCCCCAACTAATTATGTGTAATTTATGTTGAGTTT 37 22796634 0.989463104 9 36 350 0.956521739 1.643452676 0.086956522 0.216216216 0.369565217 37 2 0 44 3L:22796595-22796671 7 jim FBtr0333211|FBtr0304985|FBtr0330076|FBtr0333213|FBtr0100184|FBtr0078582|FBtr0333212 22795975|22789231|22795975|22795975|22795975|22789231|22795975 22797911|22797911|22797557|22797911|22797911|22797911|22797911 GTCTTCC 7mer-m8 dme-miR-7-5p 3L - 22796618 22796664 5'utr jim FlyBase G29721.1 CTTAAGTACATTGACTTAGGATTCATTTGTTGTCTTCCCCAACTAAT 22 22796634 0.647549083 8 21 194 0.931034483 0.954242509 0.068965517 0.272727273 0.448275862 22 0 2 27 3L:22796618-22796664 7 22 2501 FBgn0027339 2455.313333 43.04666667 66.12 0.00896016 0.511073254 0.332728373 1 1 1 0.1 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 22796997 22797004 - 3L_22796997_22797004_- 0.66873262 0.668732543 0.668732582 7.07E-08 jim FBtr0078582|FBtr0333212|FBtr0100184|FBtr0330076|FBtr0333213|FBtr0333211|FBtr0304985 22789231|22795975|22795975|22795975|22795975|22795975|22789231 22797911|22797911|22797911|22797557|22797911|22797911|22797911 3L - 22796888 22797086 5'utr jim FlyBase G39347.1 AATTAATCGAGGATATACCACTTAGGCGTAATACTAGGATAGCTCCGATACAATGAGTATGAACATGTGACGTGATAGATAGGGCAGCTATTTGTGGCGAAGGCAGAAGGGGCAGAGCAAAAGGTTGATGGCAAAGAATAGGATGGGGAACGCAGACGTTGGCGCTGAGTAATTTGATTTTTGAAGCAGCATCAAAATT 194 22796995 0.956738101 29 175 1173 0.902542373 1.851258349 0.419491525 0.164948454 0.313559322 194 21 2 213 3L:22796888-22797086 8 jim FBtr0333211|FBtr0304985|FBtr0330076|FBtr0333213|FBtr0100184|FBtr0078582|FBtr0333212 22795975|22789231|22795975|22795975|22795975|22789231|22795975 22797911|22797911|22797557|22797911|22797911|22797911|22797911 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L - 22796917 22797090 5'utr jim FlyBase G29724.1 ATACAATTAATCGAGGATATACCACTTAGGCGTAATACTAGGATAGCTCCGATACAATGAGTATGAACATGTGACGTGATAGATAGGGCAGCTATTTGTGGCGAAGGCAGAAGGGGCAGAGCAAAAGGTTGATGGCAAAGAATAGGATGGGGAACGCAGACGTTGGCGCTGAGT 151 22797007 0.966308775 22 135 919 0.848360656 1.838849091 0.409836066 0.42384106 0.643442623 151 35 2 207 3L:22796917-22797090 8 132.5 2502 FBgn0027339 2455.313333 43.04666667 66.12 0.053964599 3.078054824 2.003932244 -9 3 -3 0.1 dme-miR-14-3p 6mer3-8 AAGACT 3L 22797170 22797175 - 3L_22797170_22797175_- 0.999998522 0.999998889 0.999998705 2.83E-07 jim FBtr0078582|FBtr0333212|FBtr0100184|FBtr0330076|FBtr0333213|FBtr0333211|FBtr0304985 22789231|22795975|22795975|22795975|22795975|22795975|22789231 22797911|22797911|22797911|22797557|22797911|22797911|22797911 3L - 22797155 22797278 5'utr jim FlyBase G39348.1 GGTCAATGTGTAAGAGAAGTAATGAGCAGAATGAAGGAGAGAAACGAGAGCCAAAACACAACGTTATACGATTTCTATTTGTTTTAGCACCCCAACAACTTTTAAGACTAAAAATACATCAAAT 31 22797177 0.999975171 11 27 131 0.861111111 1.491361694 0.25 0.161290323 0.277777778 31 5 0 31 3L:22797155-22797278 6 jim FBtr0333211|FBtr0304985|FBtr0330076|FBtr0333213|FBtr0100184|FBtr0078582|FBtr0333212 22795975|22789231|22795975|22795975|22795975|22789231|22795975 22797911|22797911|22797557|22797911|22797911|22797911|22797911 AAGACT 6mer3-8 dme-miR-14-3p 3L - 22797156 22797204 5'utr jim FlyBase G29725.1 CTATTTGTTTTAGCACCCCAACAACTTTTAAGACTAAAAATACATCAAA 15 22797176 0.549390533 4 13 77 0.823529412 1.146128036 0 0.133333333 0.235294118 15 3 0 14 3L:22797156-22797204 6 12.5 2503 FBgn0027339 2455.313333 43.04666667 66.12 0.005091 0.290382531 0.189050212 2 1 1.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3L 22797335 22797340 - 3L_22797335_22797340_- 0.998211291 0.999627199 0.998919245 0.001001192 jim FBtr0078582|FBtr0333212|FBtr0100184|FBtr0330076|FBtr0333213|FBtr0333211|FBtr0304985 22789231|22795975|22795975|22795975|22795975|22795975|22789231 22797911|22797911|22797911|22797557|22797911|22797911|22797911 3L - 22797317 22797361 5'utr jim FlyBase G39349.1 AGAACGCAAACAGGACGAGTACTAGTCTTTTTGAAAAGGACTCTA 89 22797334 0.980829206 7 84 602 0.954954955 1.247154615 0.072072072 0.202247191 0.36036036 89 0 5 106 3L:22797317-22797361 6 jim FBtr0333211|FBtr0304985|FBtr0330076|FBtr0333213|FBtr0100184|FBtr0078582|FBtr0333212 22795975|22789231|22795975|22795975|22795975|22789231|22795975 22797911|22797911|22797557|22797911|22797911|22797911|22797911 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3L - 22797320 22797362 5'utr jim FlyBase G29726.1 CAGAACGCAAACAGGACGAGTACTAGTCTTTTTGAAAAGGACT 70 22797334 0.979087952 8 67 459 0.944444444 2.008600172 0.037037037 0.371428571 0.592592593 70 6 0 102 3L:22797320-22797362 6 79.5 2504 FBgn0027339 2455.313333 43.04666667 66.12 0.03237876 1.846832895 1.202359347 -6 -6 -6 0.1 dme-bantam-3p 6mer2-7 GATCTC 3L 22797563 22797568 - 3L_22797563_22797568_- 0.994137809 0.999472786 0.996805297 0.003772415 jim FBtr0078582|FBtr0333212|FBtr0100184|FBtr0333213|FBtr0333211|FBtr0304985 22789231|22795975|22795975|22795975|22795975|22789231 22797911|22797911|22797911|22797911|22797911|22797911 3L - 22797366 22797611 stop_codon jim FlyBase G39350.1 TCACACGCGATTCCCATTCATCCACACATACACTCGATATTCGGATCTCTATGATGTCATCAGTAGGAGAGACAGGAGCCGGAGGCAGGAATTCAAAGTTAATAAACACAAACTATTCACCATACTTCATAGGTTCGATTAGTTCTTTAGTATTAGACGCAAAACAAATTCTCCTAGTTTTTAAAACTAATCTTAAAATCACAAAACACAGTTTGGTAATGGCAAACGAACGAACCGAGAGGAGCT 115 22797561 0.983779384 27 105 819 0.925925926 1.619788758 0.192592593 0.147826087 0.274074074 115 8 2 125 3L:22797366-22797611 6 jim FBtr0333211|FBtr0304985|FBtr0333213|FBtr0100184|FBtr0078582|FBtr0333212 22795975|22789231|22795975|22795975|22789231|22795975 22797911|22797911|22797911|22797911|22797911|22797911 GATCTC 6mer2-7 dme-bantam-3p 3L - 22797416 22797598 stop_codon jim FlyBase G29727.1 CCATTCATCCACACATACACTCGATATTCGGATCTCTATGATGTCATCAGTAGGAGAGACAGGAGCCGGAGGCAGGAATTCAAAGTTAATAAACACAAACTATTCACCATACTTCATAGGTTCGATTAGTTCTTTAGTATTAGACGCAAAACAAATTCTCCTAGTTTTTAAAACTAATCTTAA 81 22797561 0.970681368 19 75 596 0.918699187 2.053078443 0.276422764 0.419753086 0.617886179 81 10 0 113 3L:22797416-22797598 6 52.5 2505 FBgn0027339 2455.313333 43.04666667 66.12 0.0213822 1.219606628 0.794010889 -7 -7 -7 0.1 dme-miR-8-3p 7mer-A1 AGTATTA 3L 22905391 22905397 + 3L_22905391_22905397_+ 0.823349121 0.823349549 0.823349335 2.83E-07 BoYb FBtr0078559 22905182 22905470 3L + 22905369 22905405 3'utr BoYb FlyBase G32463.1 TAGAAAAAATCGTGTGCTCTTGAGTATTAAAACCTGT 11 22905389 0.733891611 3 10 89 0.933333333 1.146128036 0.066666667 0.272727273 0.466666667 11 1 0 14 3L:22905369-22905405 7 BoYb FBtr0078559 22905182 22905470 AGTATTA 7mer-A1 dme-miR-8-3p 3L + 22905367 22905401 3'utr BoYb FlyBase G24523.1 ACTAGAAAAAATCGTGTGCTCTTGAGTATTAAAAC 6 22905388 0.974411496 3 6 39 1 1 0 0.666666667 0.8 6 0 0 10 3L:22905367-22905401 7 8 2506 FBgn0037205 488.74 16.67 25.54666667 0.016368621 0.479904019 0.313152401 2 3 2.5 0.1 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 22914478 22914484 + 3L_22914478_22914484_+ 0.823349198 0.823341349 0.823345274 5.59E-06 CG12768 FBtr0331397|FBtr0331396 22914244|22914244 22914758|22914758 3L + 22914453 22914504 3'utr CG12768 FlyBase G32470.1 AAATAATTTTTTGACTTCGCCTACTGCAGCTATATTATAAAGTCGTCCGATT 12 22914477 0.793827541 5 12 102 1 1.113943352 0 0.083333333 0.153846154 12 0 0 13 3L:22914453-22914504 7 CG12768 FBtr0331396|FBtr0331397 22914244|22914244 22914758|22914758 GCAGCTA 7mer-A1 dme-miR-980-3p 3L + 22914462 22914490 3'utr CG12768 FlyBase G24530.1 TTTGACTTCGCCTACTGCAGCTATATTAT 11 22914475 0.703517005 5 10 74 0.928571429 1.113943352 0.142857143 0.181818182 0.357142857 11 1 0 13 3L:22914462-22914490 7 11 2507 FBgn0037206 334.1233333 20.85 31.84666667 0.032921975 0.527577938 0.345405066 1 3 2 0.1 dme-miR-263a-5p 8mer-A1 GTGCCATA 3L 22951555 22951562 + 3L_22951555_22951562_+ 0.58733395 0.587674307 0.587504128 0.000240699 Mes2 FBtr0078561|FBtr0078563 22951389|22951389 22952248|22952248 3L + 22951204 22951589 stop_codon Mes2 FlyBase G32487.1 GGGCGTCGCAAGCGGAGGGTTGGATCTGCCGCCCCCACAAACTGTACGTGAGGTTTTGAACTCCAAGTTCTGCGGCTTTATTTCAGCCAAGCTAAACAGCATGGAGGACTCGGACGCGGACAATTTAATGAATCGCATTCTTCTCTTACTGGTTCAAGTGCAGCAGTGCGAAGGGTCCACGAAATAGACAGCGGAGGAGAAGAGCGCTAAGTGTACGGGTGTAATTATAGTAGCCAAAAAAAAGTACATAATGGAATGATGTTGCTGCTCAGAGCACTTATAACTGAATTTTCTTGCCATTATATATTACTTTCCTAAAGAAATACAAATTTACTTGCCAATGCCAAATCTGTGCCATACCAAAAGGATCAATCAAATATGAATGA 970 22951554 0.999995003 64 933 5859 0.966192171 2.190731785 0.072064057 0.135051546 0.253558719 970 32 6 1086 3L:22951204-22951589 8 Mes2 FBtr0078561|FBtr0078563 22951389|22951389 22952248|22952248 GTGCCATA 8mer-A1 dme-miR-263a-5p 3L + 22951332 22951588 stop_codon Mes2 FlyBase G24549.1 TGAATCGCATTCTTCTCTTACTGGTTCAAGTGCAGCAGTGCGAAGGGTCCACGAAATAGACAGCGGAGGAGAAGAGCGCTAAGTGTACGGGTGTAATTATAGTAGCCAAAAAAAAGTACATAATGGAATGATGTTGCTGCTCAGAGCACTTATAACTGAATTTTCTTGCCATTATATATTACTTTCCTAAAGAAATACAAATTTACTTGCCAATGCCAAATCTGTGCCATACCAAAAGGATCAATCAAATATGAATG 652 22951554 0.969292382 43 621 3926 0.952565344 2.390935107 0.065827686 0.377300613 0.60696999 652 46 3 984 3L:22951332-22951588 8 531 2508 FBgn0037207 3401.653333 185.0666667 283.5166667 0.156100563 2.869236311 1.872905767 1 1 1 0.1 dme-miR-79-3p 7mer-A1 AGCTTTA 3L 22951968 22951974 + 3L_22951968_22951974_+ 0.823349562 0.823349562 0.823349562 0 Mes2 FBtr0078561|FBtr0078563 22951389|22951389 22952248|22952248 3L + 22951892 22952067 3'utr Mes2 FlyBase G32488.1 AAAAAGCGAGCATATTACTCATAGTTTCATATACAGCGATATGAATATTAACAATATCTGAACACTAAATGAGAACAGCTTTAACAATTTGTCGTTTTTGAATAAAACACCATCTTTGGCAGTAATGCTTTGCTATCGATGTACGCAGACAATGTTTTGGCCATTCAGCCCAATTT 46 22951961 0.922966987 25 43 358 0.936170213 1.643452676 0.191489362 0.02173913 0.042553191 46 3 0 44 3L:22951892-22952067 7 Mes2 FBtr0078561|FBtr0078563 22951389|22951389 22952248|22952248 AGCTTTA 7mer-A1 dme-miR-79-3p 3L + 22951843 22952013 3'utr Mes2 FlyBase G24552.1 CTTGTTAAGTTGAAAACGTAGAAATTAGAAAAGAAAAGTTTTTAACTTAAAAAAGCGAGCATATTACTCATAGTTTCATATACAGCGATATGAATATTAACAATATCTGAACACTAAATGAGAACAGCTTTAACAATTTGTCGTTTTTGAATAAAACACCATCTTTGGCAG 34 22951980 0.983481742 16 30 237 0.914893617 1.633468456 0.191489362 0.294117647 0.489361702 34 4 0 43 3L:22951843-22952013 7 7 2509 FBgn0037207 3401.653333 185.0666667 283.5166667 0.002057823 0.037824207 0.024689907 7 -12 -2.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 22952122 22952127 + 3L_22952122_22952127_+ 0.908889371 0.996453923 0.952671647 0.061917452 Mes2 FBtr0078561|FBtr0078563 22951389|22951389 22952248|22952248 3L + 22952090 22952135 3'utr Mes2 FlyBase G32489.1 TTTCCGTTTTTCGGTGGATATTGAGTAATAAAGTACCTTTAAATAT 8 22952129 0.638003695 5 8 57 1 0.954242509 0 0.125 0.222222222 8 0 0 9 3L:22952090-22952135 6 Mes2 FBtr0078561|FBtr0078563 22951389|22951389 22952248|22952248 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 22952063 22952182 3'utr Mes2 FlyBase G24553.1 AATTTAAATCAAAAATTTTGAAAAAGTTTTCCGTTTTTCGGTGGATATTGAGTAATAAAGTACCTTTAAATATAAAAAAATCAAACGTGTCTACCGAACATGAACATAATCAGCCGATTT 24 22952129 0.985394676 12 21 176 0.914285714 1.505149978 0.114285714 0.416666667 0.6 24 3 0 32 3L:22952063-22952182 6 9 2510 FBgn0037207 3401.653333 185.0666667 283.5166667 0.002645772 0.048631124 0.031744166 -7 -7 -7 0.1 dme-miR-988-3p 7mer-A1 CAAGGGA 3L 23318907 23318913 - 3L_23318907_23318913_- 0.782886015 0.78290774 0.782896877 1.53E-05 alpha-Cat FBtr0339894 23318644 23329837 3L - 23318893 23318943 3'utr alpha-Cat FlyBase G39447.2 AAAACCAGAAGAAGTACGGGCCAAAGTTCGCAAGGGATCTCAAAAAAAGGT 31 23318917 0.942441584 3 26 88 0.891891892 1.217483944 0.216216216 0.193548387 0.324324324 31 3 1 33 3L:23318893-23318943 7 alpha-Cat FBtr0339894 23318644 23329837 CAAGGGA 7mer-A1 dme-miR-988-3p 3L - 23318893 23318964 3'utr alpha-Cat FlyBase G29804.1 AAAACCATTGGTCAGGCCTGAAAAACCAGAAGAAGTACGGGCCAAAGTTCGCAAGGGATCTCAAAAAAAGGT 27 23318917 0.759385332 7 25 88 0.930232558 1.602059991 0.209302326 0.481481481 0.674418605 27 3 0 40 3L:23318893-23318964 7 24.5 2511 FBgn0010215 3733.256667 144.9433333 221.23 0.006562635 0.169031576 0.110744474 4 4 4 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 23328751 23328756 - 3L_23328751_23328756_- 0.999998031 1 0.999999015 1.41E-06 alpha-Cat FBtr0339894 23318644 23329837 3L - 23328725 23328782 5'utr alpha-Cat FlyBase G39456.1 TGGATAATTATGAACCATGTATTTACACCAAACGAGTCTTAGAAGCAGTCAAAGTTCT 9 23328760 0.961543715 5 9 50 1 1 0.1 0.111111111 0.2 9 0 0 10 3L:23328725-23328782 6 alpha-Cat FBtr0339894 23318644 23329837 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 23328717 23328773 5'utr alpha-Cat FlyBase G29808.1 ATGAACCATGTATTTACACCAAACGAGTCTTAGAAGCAGTCAAAGTTCTACGAGATC 7 23328759 0.93692024 4 7 29 1 1.146128036 0.214285714 0.428571429 0.714285714 7 0 0 14 3L:23328717-23328773 6 7 2512 FBgn0010215 3733.256667 144.9433333 221.23 0.001875039 0.048294736 0.031641278 4 3 3.5 0.1 dme-miR-8-3p 6mer3-8 CAGTAT 3L 23328918 23328923 - 3L_23328918_23328923_- 0.999834509 0.864251807 0.932043158 0.095871447 alpha-Cat FBtr0339894 23318644 23329837 3L - 23328896 23328964 5'utr alpha-Cat FlyBase G39458.1 CGAGGCAGTGGATGATATTACAACAATTGACGACTTTTTAGCAGTATCTGAGAATCACATTCTTGAAGA 29 23328928 0.96039115 8 27 219 0.972222222 1.544068044 0.055555556 0.172413793 0.333333333 29 1 0 35 3L:23328896-23328964 6 alpha-Cat FBtr0339894 23318644 23329837 CAGTAT 6mer3-8 dme-miR-8-3p 3L - 23328892 23328948 5'utr alpha-Cat FlyBase G29810.1 ATTACAACAATTGACGACTTTTTAGCAGTATCTGAGAATCACATTCTTGAAGATGTA 13 23328927 0.982071212 6 12 97 1 1.230448921 0 0.230769231 0.411764706 13 0 0 17 3L:23328892-23328948 6 16.5 2513 FBgn0010215 3733.256667 144.9433333 221.23 0.004419734 0.113837592 0.074583013 5 4 4.5 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 3L 23329045 23329050 - 3L_23329045_23329050_- 0.997315284 0.999989785 0.998652534 0.001891157 alpha-Cat FBtr0339894 23318644 23329837 3L - 23328997 23329069 5'utr alpha-Cat FlyBase G39459.1 AATAAATGCAGCATCGATATTGACTGTTAGACCGAATTCAAAAGTAGCTCAAGAAAATATGACTACTTATCGA 173 23329043 0.975078345 8 172 1076 0.995614035 2.054995862 0.210526316 0.25433526 0.434210526 173 0 1 227 3L:23328997-23329069 6 alpha-Cat FBtr0339894 23318644 23329837 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 23329017 23329067 5'utr alpha-Cat FlyBase G29811.1 TAAATGCAGCATCGATATTGACTGTTAGACCGAATTCAAAAGTAGCTCAAG 87 23329043 0.970834668 6 87 541 1 2.117271296 0.145038168 0.413793103 0.610687023 87 0 0 131 3L:23329017-23329067 6 127 2514 FBgn0010215 3733.256667 144.9433333 221.23 0.034018556 0.876204494 0.574063192 -7 -7 -7 0.1 dme-miR-307a-3p 6mer2-7 GTTGTG 3L 23329300 23329305 - 3L_23329300_23329305_- 0.999790158 1 0.999895079 0.000148351 alpha-Cat FBtr0339894 23318644 23329837 3L - 23329258 23329381 5'utr alpha-Cat FlyBase G39462.1 CAGCCCAGGACTCTCTCGAGCGATTGATCAAATGTGTCGAAAGACTCGCGACCTAAGAAGGCAATTGCGAAAGGCTGTTGTGGATCATGTTTCGGACTCTTTTTTGGAGACTACAACTCCTTTG 15 23329317 0.983662649 9 14 112 0.875 1.146128036 0.125 0.066666667 0.125 15 2 0 14 3L:23329258-23329381 6 alpha-Cat FBtr0339894 23318644 23329837 GTTGTG 6mer2-7 dme-miR-307a-3p 3L - 23329256 23329391 5'utr alpha-Cat FlyBase G29812.1 AAAAAGATAACAGCCCAGGACTCTCTCGAGCGATTGATCAAATGTGTCGAAAGACTCGCGACCTAAGAAGGCAATTGCGAAAGGCTGTTGTGGATCATGTTTCGGACTCTTTTTTGGAGACTACAACTCCTTTGCT 11 23329316 0.964560654 11 11 60 1 1.146128036 0.071428571 0.181818182 0.357142857 11 0 0 14 3L:23329256-23329391 6 5 2515 FBgn0010215 3733.256667 144.9433333 221.23 0.001339313 0.03449624 0.022600913 12 11 11.5 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 3L 234028 234034 - 3L_234028_234034_- 0.782911325 0.782911422 0.782911374 7.07E-08 E(bx) FBtr0332101|FBtr0332103|FBtr0301348|FBtr0072522|FBtr0332102|FBtr0332104|FBtr0072521 233924|233924|233924|233924|233924|233924|233924 236879|234298|234298|234298|234298|234298|234298 3L - 233951 234112 3'utr E(bx) FlyBase G32851.1 AACGTACACCAGTATGCAATAAATTTCATATTCACCAGACATTTGTAAGATTAAAAATAATTAAGTAAAACCCCCTTTGTACAAAACATTAAAGTGTAAATAAACAGCATGCATTTCATTTGATATCCTTATCATATGCTGTAGGTTTAAACTTAGGCGTAT 118 234036 0.940288501 20 113 826 0.957746479 1.531478917 0.035211268 0.169491525 0.309859155 118 3 3 136 3L:233951-234112 7 E(bx) FBtr0072521|FBtr0332104|FBtr0332102|FBtr0072522|FBtr0301348|FBtr0332103|FBtr0332101 233924|233924|233924|233924|233924|233924|233924 234298|234298|234298|234298|234298|234298|236879 GTACAAA 7mer-A1 dme-miR-305-5p 3L - 233965 234094 3'utr E(bx) FlyBase G24839.1 ATAAATTTCATATTCACCAGACATTTGTAAGATTAAAAATAATTAAGTAAAACCCCCTTTGTACAAAACATTAAAGTGTAAATAAACAGCATGCATTTCATTTGATATCCTTATCATATGCTGTAGGTTT 88 234036 0.756104698 16 81 580 0.9375 1.477121255 0.0234375 0.329545455 0.5390625 88 5 3 120 3L:233965-234094 7 60 2516 FBgn0000541 5641.79 79.62333333 122.1466667 0.010634923 0.753547955 0.49121275 2 2 2 0.1 dme-miR-980-5p 7mer-m8 GAAAAAC 3L 234226 234232 - 3L_234226_234232_- 0.69112448 0.705948341 0.69853641 0.01048201 E(bx) FBtr0332101|FBtr0332103|FBtr0301348|FBtr0072522|FBtr0332102|FBtr0332104|FBtr0072521 233924|233924|233924|233924|233924|233924|233924 236879|234298|234298|234298|234298|234298|234298 3L - 234201 234321 stop_codon E(bx) FlyBase G32852.1 ATGTTTTTGACCAAAGAACATAAGAAATAATAGCCCTTGAAAACTTTAGAACAAATGATTATAGTTTATAAAGACACTTCTAACAATTTGAAAAACGTCCTTCAGTTATGTATTCTTATTT 98 234221 0.978844029 15 90 614 0.924369748 2.041392685 0.042016807 0.173469388 0.319327731 98 9 0 110 3L:234201-234321 7 E(bx) FBtr0072521|FBtr0332104|FBtr0332102|FBtr0072522|FBtr0301348|FBtr0332103|FBtr0332101 233924|233924|233924|233924|233924|233924|233924 234298|234298|234298|234298|234298|234298|236879 GAAAAAC 7mer-m8 dme-miR-980-5p 3L - 234205 234246 3'utr E(bx) FlyBase G24840.1 ACTTCTAACAATTTGAAAAACGTCCTTCAGTTATGTATTCTT 33 234221 0.768406923 4 33 225 1 1.612783857 0 0.212121212 0.365853659 33 0 0 41 3L:234205-234246 7 41 2517 FBgn0000541 5641.79 79.62333333 122.1466667 0.007267197 0.514924436 0.335662046 -11 -11 -11 0.1 dme-miR-1008-3p 7mer-A1 GCTGTGA 3L 235160 235166 - 3L_235160_235166_- 0.402289923 0.498597673 0.450443798 0.068099898 E(bx) FBtr0332101 233924 236879 3L - 235106 235189 3'utr E(bx) FlyBase G32856.1 CGACGAGTCACAATTTTATATATGCTGTGATAAATGCCAGGATTGGTTTCATGGCCGTTGCGTTGGAATACTTCAGAGCGAAGC 107 235167 0.732358486 14 95 945 0.888888889 1.572096768 0.023809524 0.177570093 0.301587302 107 12 2 112 3L:235106-235189 7 E(bx) FBtr0332101 233924 236879 GCTGTGA 7mer-A1 dme-miR-1008-3p 3L - 235100 235190 3'utr E(bx) FlyBase G24845.1 ACGACGAGTCACAATTTTATATATGCTGTGATAAATGCCAGGATTGGTTTCATGGCCGTTGCGTTGGAATACTTCAGAGCGAAGCAGAGTT 82 235167 0.990608586 14 71 733 0.846153846 1.439332694 0.053846154 0.426829268 0.638461538 82 17 3 110 3L:235100-235190 7 84 2518 FBgn0000541 5641.79 79.62333333 122.1466667 0.014888892 1.054967137 0.68769785 1 1 1 0.1 dme-miR-1008-3p 6mer3-8 AGCTGT 3L 235201 235206 - 3L_235201_235206_- 0.788032841 0.991814469 0.889923655 0.144095422 E(bx) FBtr0332101 233924 236879 3L - 235191 235217 3'utr E(bx) FlyBase G32857.1 AGCTTTACTGTAGCTGTCGTCAACCAT 5 235213 0.764084844 3 4 31 0.833333333 0.698970004 0.166666667 0.2 0.333333333 5 1 0 5 3L:235191-235217 6 E(bx) FBtr0332101 233924 236879 AGCTGT 6mer3-8 dme-miR-1008-3p 3L - 235192 235223 3'utr E(bx) FlyBase G24846.1 CGCAACAGCTTTACTGTAGCTGTCGTCAACCA 5 235212 0.783869917 4 5 32 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3L:235192-235223 6 5 2519 FBgn0000541 5641.79 79.62333333 122.1466667 0.000886244 0.062795663 0.040934396 7 6 6.5 0.1 dme-miR-277-3p 6mer3-8 TGCATT 3L 235246 235251 - 3L_235246_235251_- 0.999992376 0.999642029 0.999817202 0.00024777 E(bx) FBtr0332101 233924 236879 3L - 235222 235253 3'utr E(bx) FlyBase G32858.1 TTTGCATTGATTGCAAGAGGGCGAGAGAAACG 7 235244 0.961445126 4 6 32 0.777777778 0.84509804 0 0.285714286 0.444444444 7 2 0 7 3L:235222-235253 6 E(bx) FBtr0332101 233924 236879 TGCATT 6mer3-8 dme-miR-277-3p 3L - 235226 235259 3'utr E(bx) FlyBase G24847.1 AGTTCATTTGCATTGATTGCAAGAGGGCGAGAGA 5 235244 0.983923368 2 4 31 0.625 0.698970004 0.125 0.4 0.625 5 3 0 5 3L:235226-235259 6 6 2520 FBgn0000541 5641.79 79.62333333 122.1466667 0.001063492 0.075354795 0.049121275 -7 -7 -7 0.1 dme-miR-8-3p 8mer-A1 CAGTATTA 3L 235287 235294 - 3L_235287_235294_- 0.671698077 0.671698084 0.671698081 0 E(bx) FBtr0332101 233924 236879 3L - 235257 235315 3'utr E(bx) FlyBase G32859.1 TTGGTTCCATGGGGATTGTGTCAGTATTACCGAGGAAGCTTCTAAAAAACTATCGGAGT 76 235295 0.983374433 8 72 541 0.941860465 1.908485019 0.546511628 0.105263158 0.209302326 76 5 0 81 3L:235257-235315 8 E(bx) FBtr0332101 233924 236879 CAGTATTA 8mer-A1 dme-miR-8-3p 3L - 235271 235340 3'utr E(bx) FlyBase G24848.1 ACGTGGGGTGCGACTTGTGCAGCAATTGGTTCCATGGGGATTGTGTCAGTATTACCGAGGAAGCTTCTAA 46 235295 0.708453638 9 40 329 0.811594203 1.146128036 0.608695652 0.391304348 0.594202899 46 10 3 56 3L:235271-235340 8 56.5 2521 FBgn0000541 5641.79 79.62333333 122.1466667 0.010014552 0.709590991 0.462558673 1 1 1 0.1 dme-miR-79-3p 8mer-A1 TAGCTTTA 3L 2367921 2367928 - 3L_2367921_2367928_- 0.625054569 0.612709561 0.618882065 0.008729233 CG1317 FBtr0345587 2367841 2368638 3L - 2367910 2367944 3'utr CG1317 FlyBase G33670.1 ATGAACATTTTCGAGTTAGCTTTACGAACTGTAAA 24 2367929 0.799773147 2 23 191 0.964285714 1.130333768 0.035714286 0.166666667 0.285714286 24 0 1 27 3L:2367910-2367944 8 CG1317 FBtr0345587 2367841 2368638 TAGCTTTA 8mer-A1 dme-miR-79-3p 3L - 2367902 2367980 3'utr CG1317 FlyBase G25462.1 AAGTGGTGAAAAATGAATGGATAGTGGAATAGAAAAATGAACATTTTCGAGTTAGCTTTACGAACTGTAAAAATTACAT 14 2367929 0.980145012 5 14 101 1 1.361727836 0.217391304 0.5 0.695652174 14 0 0 23 3L:2367902-2367980 8 17.5 2522 FBgn0035333 712.6366667 22.14333333 33.55333333 0.024556693 0.790305585 0.521557719 1 1 1 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 3L 2368137 2368142 - 3L_2368137_2368142_- 0.987643259 0.993290686 0.990466972 0.003993315 CG1317 FBtr0072901|FBtr0300773|FBtr0345587 2368012|2368012|2367841 2368638|2368638|2368638 3L - 2368067 2368154 3'utr CG1317 FlyBase G33671.2 TTGTATGATATTTTGACTTCCGCCACATCCTTACAAGCACTTACAGAACTAAACGATGGGCAGCGATTAAACCTTGTATTAGAGACGT 16 2368137 0.807679161 9 14 96 0.954545455 1.322219295 0.181818182 0.375 0.545454545 16 1 0 21 3L:2368067-2368154 6 CG1317 FBtr0300773|FBtr0345587|FBtr0072901 2368012|2367841|2368012 2368638|2368638|2368638 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 2368070 2368145 3'utr CG1317 FlyBase G25464.1 ATTTTGACTTCCGCCACATCCTTACAAGCACTTACAGAACTAAACGATGGGCAGCGATTAAACCTTGTATTAGAGA 6 2368137 0.982231392 5 6 41 1 1.041392685 0.090909091 0.333333333 0.636363636 6 0 0 11 3L:2368070-2368145 6 6 2523 FBgn0035333 712.6366667 22.14333333 33.55333333 0.008419438 0.270961915 0.178819789 -5 -5 -5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 2368250 2368255 - 3L_2368250_2368255_- 0.996965897 0.760940935 0.878953416 0.166894878 CG1317 FBtr0072901|FBtr0300773|FBtr0345587 2368012|2368012|2367841 2368638|2368638|2368638 3L - 2368205 2368263 3'utr CG1317 FlyBase G33672.1 ATAGCTTAGTACCTTTGTTTTCCCAATCTTATTATCCTTTGCAATACGATTAATTTGTT 5 2368248 0.994454976 2 4 57 0.857142857 0.77815125 0.142857143 0.2 0.428571429 5 1 0 6 3L:2368205-2368263 6 CG1317 FBtr0300773|FBtr0345587|FBtr0072901 2368012|2367841|2368012 2368638|2368638|2368638 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L - 2368240 2368309 3'utr CG1317 FlyBase G25465.2 TATCTATTGCTCTGCGTTACGCAAGGATTTGGATTTGGATTTCGTTATAGCTTAGTACCTTTGTTTTCCC 9 2368248 0.992582761 4 6 81 0.9375 1.176091259 0.375 0.444444444 0.6875 9 1 0 15 3L:2368240-2368309 6 5 2524 FBgn0035333 712.6366667 22.14333333 33.55333333 0.007016198 0.225801596 0.149016491 -7 -7 -7 0.1 dme-miR-282-5p 7mer-A1 GAGGCTA 3L 2368550 2368556 - 3L_2368550_2368556_- 0.823343189 0.823343277 0.823343233 7.07E-08 CG1317 FBtr0072901 2368012 2368638 3L - 2368533 2368575 3'utr CG1317 FlyBase G33673.1 AATAAATTATCAGCTCATGGAGGCTATTAGGTTCTCACGTTTA 129 2368558 0.913325701 6 126 996 0.981707317 1.90579588 0.018292683 0.209302326 0.37804878 129 2 1 161 3L:2368533-2368575 7 CG1317 FBtr0072901 2368012 2368638 GAGGCTA 7mer-A1 dme-miR-282-5p 3L - 2368531 2368595 3'utr CG1317 FlyBase G25466.1 GCGACAGGAGGAGGGGAATCAATAAATTATCAGCTCATGGAGGCTATTAGGTTCTCACGTTTAAA 59 2368558 0.982214949 5 57 415 0.99009901 2 0.02970297 0.474576271 0.693069307 59 1 0 100 3L:2368531-2368595 7 92 2525 FBgn0035333 712.6366667 22.14333333 33.55333333 0.129098044 4.15474936 2.741903437 2 2 2 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 23749013 23749019 + 3L_23749013_23749019_+ 0.801486804 0.801619933 0.801553369 9.41E-05 CG17698 FBtr0111166|FBtr0111166|FBtr0111166|FBtr0333913|FBtr0333913|FBtr0333913|FBtr0333914|FBtr0333914|FBtr0333914|FBtr0333912|FBtr0333912|FBtr0333912 23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858 23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058 3L + 23748928 23749036 3'utr CG17698 FlyBase G32572.1 TTGAATTTGACAGTTTCCAAAAGCCAAACACTTGAAATACTTTAAAATATTTAATTATTAGTGATTAAATTTATGTATATTTTTTTGTGATAAAAATAAATTTAGAATA 92 23749011 0.983716914 20 80 1000 0.865384615 1.255272505 0.009615385 0.130434783 0.230769231 92 10 4 90 3L:23748928-23749036 7 CG17698 FBtr0333912|FBtr0333912|FBtr0333912|FBtr0333914|FBtr0333914|FBtr0333914|FBtr0333913|FBtr0333913|FBtr0333913|FBtr0111166|FBtr0111166|FBtr0111166 23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858 23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 23748896 23749045 3'utr CG17698 FlyBase G24619.1 TTTCATAGAACAAAAAAACCAATTTTTTATTTTTGAATTTGACAGTTTCCAAAAGCCAAACACTTGAAATACTTTAAAATATTTAATTATTAGTGATTAAATTTATGTATATTTTTTTGTGATAAAAATAAATTTAGAATATTATAAAGT 80 23749011 0.993574972 18 72 894 0.90990991 1.527200119 0.036036036 0.3125 0.504504505 80 8 2 101 3L:23748896-23749045 7 76 2526 FBgn0040056 619.7966667 30.24 46.48666667 0.12262086 2.513227513 1.634877384 2 2 2 0.1 dme-miR-79-3p 7mer-m8 TAGCTTT 3L 238415 238421 - 3L_238415_238421_- 0.620077755 0.619548935 0.619813345 0.000373989 E(bx) FBtr0072523|FBtr0301349 238321|238321 239039|239039 3L - 238392 238565 3'utr E(bx) FlyBase G32865.1 TAAAAGTGTGAATACCTTATTAAATATAAGTAAATATTACATAGTGAGTAGGAAGCACATTAAGCTTATTAACTTAACAATAATCCAGACTGTCACCTAATGTTAAAAACCAAGGCAAAAGTATTAGAACAACTTTGCTCCGATTAGCTTTTCTTGCCTGAGGGACATTTGGTT 473 238422 0.909691581 28 466 4097 0.983271375 2.723455672 0.161710037 0.122621564 0.228624535 473 9 0 529 3L:238392-238565 7 E(bx) FBtr0301349|FBtr0072523 238321|238321 239039|239039 TAGCTTT 7mer-m8 dme-miR-79-3p 3L - 238397 238443 3'utr E(bx) FlyBase G24849.1 ATTAGAACAACTTTGCTCCGATTAGCTTTTCTTGCCTGAGGGACATT 120 238422 0.850697121 11 116 1171 0.970238095 2.212187604 0.178571429 0.316666667 0.511904762 120 5 0 163 3L:238397-238443 7 168 2527 FBgn0000541 5641.79 79.62333333 122.1466667 0.029777783 2.109934274 1.375395699 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 238990 238995 - 3L_238990_238995_- 0.754999939 0.725843394 0.740421666 0.020616759 E(bx) FBtr0072523|FBtr0072523|FBtr0072523|FBtr0301349|FBtr0301349|FBtr0301349 238321|238321|238321|238321|238321|238321 239039|239039|239039|239039|239039|239039 3L - 238954 239175 stop_codon E(bx) FlyBase G32869.1 AAATGGCAAACTTGGTGTTCTAGGCCCAACAAAAATATACTTGGCGGTACAGCCGGAAAATGCAGTTCAATCACAGCCACCTCCTCTAACCCCTGTTCACCAATCGGCTGCGCATCAGCAAGTGAGTAGTTTTTAGTTATAATTATAATGTAAAAGTATAAATGAGGAATAGGAACAGGACTGTGAGGGTTGCATTTGCTGATTCTCGACCGAAATGCCAAT 87 238992 0.950903422 21 85 381 0.980582524 1.703291378 0.203883495 0.149425287 0.281553398 87 1 1 101 3L:238954-239175 6 E(bx) FBtr0301349|FBtr0301349|FBtr0301349|FBtr0072523|FBtr0072523|FBtr0072523 238321|238321|238321|238321|238321|238321 239039|239039|239039|239039|239039|239039 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 238924 239014 3'utr E(bx) FlyBase G24853.1 ATGAGGAATAGGAACAGGACTGTGAGGGTTGCATTTGCTGATTCTCGACCGAAATGCCAATTTGTTTTTTGTTCCATCCTACGTTTAAGTT 36 238992 0.935286156 10 34 192 0.966666667 1.763427994 0.333333333 0.5 0.7 36 2 0 58 3L:238924-239014 6 40 2528 FBgn0000541 5641.79 79.62333333 122.1466667 0.007089948 0.502365303 0.327475166 -3 -3 -3 0.1 dme-miR-263a-5p 6mer3-8 GTGCCA 3L 2408753 2408758 + 3L_2408753_2408758_+ 0.945955361 0.966186134 0.956070748 0.014305265 CG45186 FBtr0345113|FBtr0345115|FBtr0345114 2408340|2408340|2408340 2409103|2409103|2409103 3L + 2408726 2408778 3'utr CG45186 FlyBase G27311.1 AATTAATTGTTAATTTGACTGCAACTTGTGCCAATGATTTTTATACGTTTACT 71 2408754 0.824988414 11 69 619 0.977777778 1.643452676 0.022222222 0.23943662 0.4 71 1 1 88 3L:2408726-2408778 6 CG45186 FBtr0345113|FBtr0345115|FBtr0345114 2408340|2408340|2408340 2409103|2409103|2409103 GTGCCA 6mer3-8 dme-miR-263a-5p 3L + 2408696 2408771 3'utr CG45186 FlyBase G20674.1 CTTTAACACAGTTTCCTCGTTTTCCTTCTTAATTAATTGTTAATTTGACTGCAACTTGTGCCAATGATTTTTATAC 65 2408754 0.886445758 11 61 558 0.966666667 1.638489257 0 0.292307692 0.488888889 65 2 1 87 3L:2408696-2408771 6 60 2529 FBgn0266696 1930.986667 36.99 56.66666667 0.031072198 1.622060016 1.058823529 -1 -1 -1 0.1 dme-miR-965-3p 7mer-A1 ACGCTTA 3L 24537997 24538003 + 3L_24537997_24538003_+ 0.822053619 0.68962732 0.75584047 0.093639535 mRpS5 FBtr0111144 24537614 24538135 3L + 24537941 24538037 3'utr mRpS5 FlyBase G32596.1 TAGAAGTATCGGGTCACTAGCCGAGTCGATATGGCCATGGACAAAAAACTTTTTCCACGCTTACAATCCGCCCAAAACTACTGCGACCATACTTTTG 25 24538007 0.95313442 8 22 105 0.903225806 1.146128036 0.032258065 0.2 0.35483871 25 2 1 28 3L:24537941-24538037 7 mRpS5 FBtr0111144 24537614 24538135 ACGCTTA 7mer-A1 dme-miR-965-3p 3L + 24537997 24538029 3'utr mRpS5 FlyBase G24637.1 ACGCTTACAATCCGCCCAAAACTACTGCGACCA 11 24538007 0.941586687 2 8 28 0.785714286 1.041392685 0.071428571 0.181818182 0.357142857 11 3 0 11 3L:24537997-24538029 6 11.5 2530 FBgn0044510 1744.32 200.0466667 307.92 0.006592827 0.057486586 0.037347363 -10 -10 -10 0.1 dme-miR-79-3p 6mer2-7 AGCTTT 3L 2464678 2464683 + 3L_2464678_2464683_+ 0.98846563 0.992371276 0.990418453 0.002761747 CG45186 FBtr0345103|FBtr0345085|FBtr0345087|FBtr0345110|FBtr0345092|FBtr0345111|FBtr0345100|FBtr0345094|FBtr0345099|FBtr0345096|FBtr0345109|FBtr0345088|FBtr0345102|FBtr0345095 2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302 2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849 3L + 2464572 2464707 3'utr CG45186 FlyBase G27341.1 ATTTAAACCGAGAGACAGTTTTATTCCCAACGGCTCGTATATTAATTATGTCTGGCCAGCAAAGCCTTCCAGTTTACCTTTATCCTATATTATTATTATGCGAAACAGCTTTGTGCTTATTTATACATAATACACT 28 2464682 0.987888186 11 28 257 1 1.491361694 0.064516129 0.107142857 0.193548387 28 0 0 31 3L:2464572-2464707 6 CG45186 FBtr0345099|FBtr0345087|FBtr0345110|FBtr0345094|FBtr0345103|FBtr0345109|FBtr0345095|FBtr0345092|FBtr0345100|FBtr0345088|FBtr0345111|FBtr0345102|FBtr0345085|FBtr0345096 2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302 2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849 AGCTTT 6mer2-7 dme-miR-79-3p 3L + 2464669 2464701 3'utr CG45186 FlyBase G20699.2 ATGCGAAACAGCTTTGTGCTTATTTATACATAA 10 2464682 0.768610995 3 8 76 0.928571429 1.113943352 0.071428571 0.2 0.428571429 10 1 0 13 3L:2464669-2464701 6 12 2531 FBgn0266696 1930.986667 36.99 56.66666667 0.00621444 0.324412003 0.211764706 -4 -4 -4 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 2464736 2464741 + 3L_2464736_2464741_+ 0.997520691 0.998167582 0.997844136 0.000457427 CG45186 FBtr0345103|FBtr0345085|FBtr0345087|FBtr0345110|FBtr0345092|FBtr0345111|FBtr0345100|FBtr0345094|FBtr0345099|FBtr0345096|FBtr0345109|FBtr0345088|FBtr0345102|FBtr0345095 2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302 2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849 3L + 2464713 2464762 3'utr CG45186 FlyBase G27342.1 TTATTTACATTTAAAAACGAATTGTACCTTAAACGGAATTATATTATGAT 276 2464735 0.772560124 8 269 1579 0.968299712 2.049218023 0.18443804 0.195652174 0.360230548 276 9 2 336 3L:2464713-2464762 6 CG45186 FBtr0345099|FBtr0345087|FBtr0345110|FBtr0345094|FBtr0345103|FBtr0345109|FBtr0345095|FBtr0345092|FBtr0345100|FBtr0345088|FBtr0345111|FBtr0345102|FBtr0345085|FBtr0345096 2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302 2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 2464715 2464800 3'utr CG45186 FlyBase G20700.1 ATTTACATTTAAAAACGAATTGTACCTTAAACGGAATTATATTATGATGAGTATGTATTACATTTATTATTATTATTGTAATATTT 181 2464735 0.966755891 7 180 978 0.996363636 2.437750563 0.250909091 0.397790055 0.603636364 181 1 0 274 3L:2464715-2464800 6 222.5 2532 FBgn0266696 1930.986667 36.99 56.66666667 0.115226068 6.015139227 3.926470588 1 1 1 0.1 dme-miR-263a-5p 7mer-m8 GTGCCAT 3L 2492103 2492109 + 3L_2492103_2492109_+ 0.659000077 0.659000077 0.659000077 0 CG1146 FBtr0344219|FBtr0072921|FBtr0072923|FBtr0072922 2492069|2492069|2492069|2492069 2492613|2492613|2492613|2492613 3L + 2492089 2492160 3'utr CG1146 FlyBase G27354.1 AGGAACGTTTTATAGTGCCATCCCCCAGGGTCAGATGGAACAACCAGGTGAACTCCCATCCCAACCAGGCAT 35 2492107 0.807531554 7 33 140 0.953488372 1.612783857 0.186046512 0.228571429 0.372093023 35 2 0 41 3L:2492089-2492160 7 CG1146 FBtr0072923|FBtr0072922|FBtr0344219|FBtr0072921 2492069|2492069|2492069|2492069 2492613|2492613|2492613|2492613 GTGCCAT 7mer-m8 dme-miR-263a-5p 3L + 2492088 2492124 3'utr CG1146 FlyBase G20706.1 AAGGAACGTTTTATAGTGCCATCCCCCAGGGTCAGAT 13 2492106 0.802836265 3 13 66 1 1.322219295 0.285714286 0.461538462 0.666666667 13 0 0 21 3L:2492088-2492124 7 17 2533 FBgn0035346 752.39 49.49 76.20666667 0.022594665 0.343503738 0.223077596 -4 -3 -3.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 3L 2498967 2498972 + 3L_2498967_2498972_+ 0.999861667 0.99954939 0.999705529 0.000220829 CG45186 FBtr0345104|FBtr0345105|FBtr0345107|FBtr0345112|FBtr0345108|FBtr0345106 2498644|2498644|2498644|2498644|2498644|2498644 2499226|2499226|2499226|2499226|2499226|2499226 3L + 2498915 2498990 3'utr CG45186 FlyBase G27366.1 CTCGCTTCATTCGGTAGCTGTGCGGAGTTTGGAGTTCTTCTATTATATCGTATACCTGTACATAATATTAAGTTGA 23 2498965 0.83496995 6 20 226 0.9 1.130333768 0.2 0.217391304 0.4 23 2 1 27 3L:2498915-2498990 6 CG45186 FBtr0345112|FBtr0345107|FBtr0345105|FBtr0345104|FBtr0345106|FBtr0345108 2498644|2498644|2498644|2498644|2498644|2498644 2499226|2499226|2499226|2499226|2499226|2499226 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 3L + 2498955 2498987 3'utr CG45186 FlyBase G20715.1 TATTATATCGTATACCTGTACATAATATTAAGT 5 2498965 0.793788746 2 5 49 1 1.041392685 0 0.4 0.727272727 5 0 0 11 3L:2498955-2498987 6 9 2534 FBgn0266696 1930.986667 36.99 56.66666667 0.00466083 0.243309002 0.158823529 2 2 2 0.1 dme-miR-1012-3p 6mer2-7 TGACTA 3L 250315 250320 - 3L_250315_250320_- 0.908580142 0.999504978 0.95404256 0.064293613 DIP2 FBtr0072520|FBtr0305325|FBtr0332108|FBtr0332110|FBtr0332109 250227|250227|250227|250227|250227 250509|250509|250509|250509|250509 3L - 250274 250328 3'utr DIP2 FlyBase G32911.1 CAATAAAATGACTATTTATCTTTATATGACCATATAAGTGACAGCAAACATTTAA 11 250314 0.993639333 4 9 103 0.818181818 0.954242509 0 0 0 11 2 0 9 3L:250274-250328 6 DIP2 FBtr0332109|FBtr0072520|FBtr0305325|FBtr0332108|FBtr0332110 250227|250227|250227|250227|250227 250509|250509|250509|250509|250509 TGACTA 6mer2-7 dme-miR-1012-3p 3L - 250283 250327 3'utr DIP2 FlyBase G24896.1 AATAAAATGACTATTTATCTTTATATGACCATATAAGTGACAGCA 9 250313 0.987669277 6 9 78 1 1.113943352 0 0.333333333 0.538461538 9 0 0 13 3L:250283-250327 6 8.5 2535 FBgn0024806 1152.88 23.42666667 35.82 0.00737284 0.362834377 0.237297599 -6 -7 -6.5 0.1 dme-miR-79-3p 8mer-A1 TAGCTTTA 3L 2507173 2507180 - 3L_2507173_2507180_- 0.625363666 0.625363819 0.625363742 7.07E-08 Spn FBtr0304620|FBtr0304614|FBtr0304619 2506569|2505243|2505243 2508306|2508306|2508306 3L - 2507159 2507248 3'utr Spn FlyBase G33690.1 GGAAGCAAGCAGCTTCAAGAGCGATTTCTATTCGTTAGCAAGTATGTCTGTGTGAATGGGCGTGATTGTAGCTTTAATTTCAATTTACTT 161 2507182 0.825294478 11 156 1527 0.972972973 1.653212514 0.324324324 0.124223602 0.237837838 161 2 3 180 3L:2507159-2507248 8 Spn FBtr0304619|FBtr0304614|FBtr0304620 2505243|2505243|2506569 2508306|2508306|2508306 TAGCTTTA 8mer-A1 dme-miR-79-3p 3L - 2507158 2507246 3'utr Spn FlyBase G25473.3 AAGCAAGCAGCTTCAAGAGCGATTTCTATTCGTTAGCAAGTATGTCTGTGTGAATGGGCGTGATTGTAGCTTTAATTTCAATTTACTTT 124 2507182 0.797884509 15 122 1181 0.985221675 2 0.325123153 0.475806452 0.679802956 124 2 1 200 3L:2507158-2507246 8 89.5 2536 FBgn0010905 2101.51 31.02666667 47.43666667 0.042588425 2.884615385 1.886726161 2 2 2 0.1 dme-miR-33-5p 8mer-A1 CAATGCAA 3L 2507289 2507296 - 3L_2507289_2507296_- 0.634548273 0.634548128 0.6345482 1.41E-07 Spn FBtr0304620|FBtr0304614|FBtr0304619 2506569|2505243|2505243 2508306|2508306|2508306 3L - 2507265 2507316 3'utr Spn FlyBase G33691.1 AGCAGTTTCAGCAGCCAAATCAATGCAAAGTGTCCACCCAAATTTGTTAAGC 148 2507297 0.962321248 3 144 624 0.976744186 2.225309282 0.081395349 0.135135135 0.255813953 148 4 0 168 3L:2507265-2507316 8 Spn FBtr0304619|FBtr0304614|FBtr0304620 2505243|2505243|2506569 2508306|2508306|2508306 CAATGCAA 8mer-A1 dme-miR-33-5p 3L - 2507270 2507340 3'utr Spn FlyBase G25474.1 TGAAATGCAGTCGGTTACATTTCGAGCAGTTTCAGCAGCCAAATCAATGCAAAGTGTCCACCCAAATTTGT 59 2507297 0.945031464 5 55 225 0.954022989 1.441956838 0.057471264 0.406779661 0.597701149 59 2 2 83 3L:2507270-2507340 8 102 2537 FBgn0010905 2101.51 31.02666667 47.43666667 0.048536528 3.287494628 2.150235402 1 1 1 0.1 dme-miR-317-5p 6mer2-7 TATCCC 3L 2507473 2507478 - 3L_2507473_2507478_- 0.999818766 0.999996007 0.999907386 0.000125299 Spn FBtr0304620|FBtr0304614|FBtr0304619 2506569|2505243|2505243 2508306|2508306|2508306 3L - 2507464 2507494 3'utr Spn FlyBase G33693.1 ACGGAACGTACTGTACTATCCCCTAAAAATT 14 2507481 0.58831537 5 14 71 1 1.255272505 0.222222222 0.214285714 0.388888889 14 0 0 18 3L:2507464-2507494 6 Spn FBtr0304619|FBtr0304614|FBtr0304620 2505243|2505243|2506569 2508306|2508306|2508306 TATCCC 6mer2-7 dme-miR-317-5p 3L - 2507416 2507497 3'utr Spn FlyBase G25475.1 TTTACGGAACGTACTGTACTATCCCCTAAAAATTAATGCTAAAGTATTGTACTGTATGCTATGCCTGAAAGTCATTTAAGTA 17 2507477 0.868674496 10 16 115 0.956521739 1.342422681 0.173913043 0.235294118 0.434782609 17 1 0 22 3L:2507416-2507497 6 10.5 2538 FBgn0010905 2101.51 31.02666667 47.43666667 0.004996407 0.338418565 0.221347762 3 -1 1 0.1 dme-miR-1012-3p 6mer2-7 TGACTA 3L 2507570 2507575 - 3L_2507570_2507575_- 0.958491824 0.999998084 0.979244954 0.029349386 Spn FBtr0304620|FBtr0304614|FBtr0304619 2506569|2505243|2505243 2508306|2508306|2508306 3L - 2507498 2507575 3'utr Spn FlyBase G33694.1 TGACTAGCGCATATTCAATAATATTCAATTCTAGATATACATATACATATGTGTGTGCAACAGTTATATGTCAAGACA 9 2507554 0.990493938 6 8 77 0.888888889 0.903089987 0 0 0 9 1 0 8 3L:2507498-2507575 6 Spn FBtr0304619|FBtr0304614|FBtr0304620 2505243|2505243|2506569 2508306|2508306|2508306 TGACTA 6mer2-7 dme-miR-1012-3p 3L - 2507537 2507597 3'utr Spn FlyBase G25476.1 ATTATTAATCTGTGTAATTTAATGACTAGCGCATATTCAATAATATTCAATTCTAGATATA 9 2507575 0.986858617 5 8 74 0.933333333 1.146128036 0.133333333 0.333333333 0.6 9 1 0 14 3L:2507537-2507597 6 3.5 2539 FBgn0010905 2101.51 31.02666667 47.43666667 0.001665469 0.112806188 0.073782587 -21 0 -10.5 0.1 dme-miR-8-3p 6mer3-8 CAGTAT 3L 2508251 2508256 - 3L_2508251_2508256_- 0.99999978 0.999223376 0.999611578 0.000548998 Spn FBtr0304617|FBtr0345046|FBtr0304613|FBtr0304620|FBtr0304618|FBtr0304616|FBtr0304615|FBtr0304621|FBtr0304614|FBtr0304619|FBtr0345047 2508045|2508045|2508045|2506569|2508045|2508045|2508045|2508045|2505243|2505243|2508045 2509405|2508306|2508306|2508306|2508306|2508306|2508306|2508306|2508306|2508306|2508306 3L - 2508214 2508308 stop_codon Spn FlyBase G33699.1 AGTTGAATTCTAGTTGATAAGCATCAAAGTAGCCAAAAACCAAAAGCATACGCAGTATATATTGTAGTCTATATACATACATGCATACACAACAC 30 2508260 0.97581507 12 29 188 0.971428571 1.531478917 0.057142857 0.166666667 0.285714286 30 1 0 34 3L:2508214-2508308 6 Spn FBtr0304619|FBtr0345047|FBtr0304621|FBtr0304614|FBtr0304620|FBtr0304618|FBtr0304617|FBtr0304616|FBtr0304615|FBtr0345046|FBtr0304613 2505243|2508045|2508045|2505243|2506569|2508045|2508045|2508045|2508045|2508045|2508045 2508306|2508306|2508306|2508306|2508306|2508306|2509405|2508306|2508306|2508306|2508306 CAGTAT 6mer3-8 dme-miR-8-3p 3L - 2508213 2508306 5'utr Spn FlyBase G25481.1 TTGAATTCTAGTTGATAAGCATCAAAGTAGCCAAAAACCAAAAGCATACGCAGTATATATTGTAGTCTATATACATACATGCATACACAACACA 16 2508246 0.976267093 10 14 89 0.782608696 1.255272505 0.043478261 0.375 0.565217391 16 5 0 18 3L:2508213-2508306 6 15.5 2540 FBgn0010905 2101.51 31.02666667 47.43666667 0.007375649 0.499570262 0.326751458 4 -10 -3 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3L 25114960 25114965 + 3L_25114960_25114965_+ 0.92446523 0.963867311 0.944166271 0.027861492 Set1 FBtr0302246|FBtr0113871|FBtr0113870|FBtr0302245|FBtr0302243|FBtr0302248|FBtr0302247|FBtr0302244|FBtr0113869 25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896 25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180 3L + 25114781 25114995 stop_codon Set1 FlyBase G32670.1 TCAAAGCAACCCATTGGTATCAACGAGGAAATAACTTACGACTATAAATTTCCACTAGAAGACGAAAAAATACCTTGTCTATGCGGCGCCCAAGGATGTCGGGGTACACTTAACTAATACTTATTTACAACAATGAATTAAATATTTTAGAGCACATAAATTTAATTTGTTCATAAAATCCAAAGTGGGGTACGTGTAAGTATATATAGTTTTTT 38 25114966 0.970350423 19 37 211 0.979591837 1.681241237 0.204081633 0.236842105 0.408163265 38 1 0 48 3L:25114781-25114995 6 Set1 FBtr0302248|FBtr0302247|FBtr0302244|FBtr0113869|FBtr0302246|FBtr0113870|FBtr0113871|FBtr0302245|FBtr0302243 25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896 25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 25114918 25114977 3'utr Set1 FlyBase G24702.1 TTAAATATTTTAGAGCACATAAATTTAATTTGTTCATAAAATCCAAAGTGGGGTACGTGT 10 25114966 0.980143904 4 8 58 0.933333333 0.84509804 0.4 0.4 0.6 10 0 1 14 3L:25114918-25114977 6 11 2541 FBgn0040022 1603.58 36.14666667 55.41666667 0.006859652 0.304315751 0.198496241 -6 -6 -6 0.1 dme-miR-283-5p 6mer3-8 TGATAT 3L 25115033 25115038 - 3L_25115033_25115038_- 1 1 1 0 MED21 FBtr0113739|FBtr0113740 25114922|25114922 25115218|25115218 3L - 25114923 25115180 3'utr MED21 FlyBase G39507.1 AAATTTAAGATAATGTATTTATTGCATTTTCGTTCGTGTTTACAGATCAAATGGGTTTTAGTATATACATATTGTTTTTATAAGTAAAGTATTTTAGCTTAATTTAGACCTAAACCATTTTGAACAGCACCTCTGACCTCGTTGATATAATTTTTATAATAATTAATTATAGTTTTAAGTTATAAAAAAAACTATATATACTTACACGTACCCCACTTTGGATTTTATGAACAAATTAAATTTATGTGCTCTAAAATA 233 25115047 0.985169696 44 212 1731 0.918149466 1.809559715 0.149466192 0.175965665 0.316725979 233 20 3 258 3L:25114923-25115180 6 MED21 FBtr0113740|FBtr0113739 25114922|25114922 25115218|25115218 TGATAT 6mer3-8 dme-miR-283-5p 3L - 25115017 25115176 3'utr MED21 FlyBase G29845.1 TTAAGATAATGTATTTATTGCATTTTCGTTCGTGTTTACAGATCAAATGGGTTTTAGTATATACATATTGTTTTTATAAGTAAAGTATTTTAGCTTAATTTAGACCTAAACCATTTTGAACAGCACCTCTGACCTCGTTGATATAATTTTTATAATAATT 141 25115047 0.725898796 26 133 967 0.9543379 1.475048246 0.210045662 0.34751773 0.579908676 141 4 6 209 3L:25115017-25115176 6 117.5 2542 FBgn0040020 302.5833333 44.85333333 68.74333333 0.388322776 2.619649227 1.709256655 9 9 9 0.1 "dme-miR-995-3p,dme-miR-998-3p" 6mer2-7 GGTGCT 3L 25115050 25115055 + 3L_25115050_25115055_+ 0.999999974 0.999999998 0.999999986 0 Set1 FBtr0302246|FBtr0113871|FBtr0113870|FBtr0302245|FBtr0302243|FBtr0302248|FBtr0302247|FBtr0302244|FBtr0113869 25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896 25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180 3L + 25115002 25115088 3'utr Set1 FlyBase G32671.1 CTTAAAACTATAATTAATTATTATAAAAATTATATCAACGAGGTCAGAGGTGCTGTTCAAAATGGTTTAGGTCTAAATTAAGCTAAA 31 25115056 0.978840637 12 30 203 0.970588235 1.51851394 0.235294118 0.096774194 0.176470588 31 1 0 33 3L:25115002-25115088 6 Set1 FBtr0302248|FBtr0302247|FBtr0302244|FBtr0113869|FBtr0302246|FBtr0113870|FBtr0113871|FBtr0302245|FBtr0302243 25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896 25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180 GGTGCT 6mer2-7 "dme-miR-995-3p,dme-miR-998-3p" 3L + 25115023 25115089 3'utr Set1 FlyBase G24703.1 TATAAAAATTATATCAACGAGGTCAGAGGTGCTGTTCAAAATGGTTTAGGTCTAAATTAAGCTAAAA 31 25115054 0.702702687 11 27 162 0.88 1.342422681 0.26 0.451612903 0.66 31 5 1 44 3L:25115023-25115089 6 21 2543 FBgn0040022 1603.58 36.14666667 55.41666667 0.013095698 0.580966433 0.378947368 -6 -4 -5 0.1 dme-bantam-3p 6mer3-8 TGATCT 3L 25115132 25115137 + 3L_25115132_25115137_+ 0.999999821 0.999999458 0.999999639 2.12E-07 Set1 FBtr0302246|FBtr0113871|FBtr0113870|FBtr0302245|FBtr0302243|FBtr0302248|FBtr0302247|FBtr0302244|FBtr0113869 25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896 25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180 3L + 25115100 25115180 3'utr Set1 FlyBase G32672.1 ATAAAAACAATATGTATATACTAAAACCCATTTGATCTGTAAACACGAACGAAAATGCAATAAATACATTATCTTAAATTT 124 25115131 0.755210737 15 121 710 0.966666667 2.161368002 0.06 0.177419355 0.32 124 5 0 145 3L:25115100-25115180 6 Set1 FBtr0302248|FBtr0302247|FBtr0302244|FBtr0113869|FBtr0302246|FBtr0113870|FBtr0113871|FBtr0302245|FBtr0302243 25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896 25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180 TGATCT 6mer3-8 dme-bantam-3p 3L + 25115108 25115166 3'utr Set1 FlyBase G24704.1 AATATGTATATACTAAAACCCATTTGATCTGTAAACACGAACGAAAATGCAATAAATAC 105 25115131 0.99295358 6 103 573 0.986842105 1.875061263 0.059210526 0.361904762 0.559210526 105 1 1 150 3L:25115108-25115166 6 102 2544 FBgn0040022 1603.58 36.14666667 55.41666667 0.063607678 2.821836961 1.840601504 1 1 1 0.1 dme-miR-999-3p 6mer3-8 AGTTAA 3L 2555890 2555895 - 3L_2555890_2555895_- 0.999999997 1 0.999999999 0 msn FBtr0333364|FBtr0333362|FBtr0072959|FBtr0333365|FBtr0072956|FBtr0072958|FBtr0072957|FBtr0333363 2555772|2555772|2555772|2554845|2554845|2554845|2554845|2555772 2556555|2556555|2556555|2556555|2556555|2556555|2556555|2556555 3L - 2555889 2555929 3'utr msn FlyBase G33742.1 TGTCGTTTCACGATTGTGTATGATTTCGCTTACAAGTTAAA 10 2555908 0.796792999 5 10 86 1 1.204119983 0.1875 0.4 0.625 10 0 0 16 3L:2555889-2555929 6 msn FBtr0072957|FBtr0333363|FBtr0072956|FBtr0072958|FBtr0072959|FBtr0333365|FBtr0333364|FBtr0333362 2554845|2555772|2554845|2554845|2555772|2554845|2555772|2555772 2556555|2556555|2556555|2556555|2556555|2556555|2556555|2556555 AGTTAA 6mer3-8 dme-miR-999-3p 3L - 2555877 2555937 3'utr msn FlyBase G25511.1 ATTTCAAATGTCGTTTCACGATTGTGTATGATTTCGCTTACAAGTTAAACTTAAGTTGAAA 13 2555908 0.70765889 7 12 118 1 1.278753601 0.157894737 0.384615385 0.578947368 13 0 0 19 3L:2555877-2555937 6 2.5 2545 FBgn0010909 7320.6 159.8166667 245.3066667 0.000341502 0.015642924 0.010191325 13 13 13 0.1 dme-miR-970-3p 7mer-A1 CTTATGA 3L 2556227 2556233 - 3L_2556227_2556233_- 0.823219355 0.767680721 0.795450038 0.039271791 msn FBtr0333364|FBtr0333362|FBtr0072959|FBtr0333365|FBtr0072956|FBtr0072958|FBtr0072957|FBtr0333363 2555772|2555772|2555772|2554845|2554845|2554845|2554845|2555772 2556555|2556555|2556555|2556555|2556555|2556555|2556555|2556555 3L - 2556152 2556264 3'utr msn FlyBase G33744.1 CATACCAACAACCCGAGGTCATGAACTTGTGCTTATGAAATTCACCACGACAACGTTTCAATTAGTAAATGTGCTAAGAAAACTCGATCAACGCGAGTCTATATATATATATA 15 2556237 0.985373384 6 12 100 0.736842105 1.146128036 0.105263158 0.133333333 0.315789474 15 5 0 14 3L:2556152-2556264 7 msn FBtr0072957|FBtr0333363|FBtr0072956|FBtr0072958|FBtr0072959|FBtr0333365|FBtr0333364|FBtr0333362 2554845|2555772|2554845|2554845|2555772|2554845|2555772|2555772 2556555|2556555|2556555|2556555|2556555|2556555|2556555|2556555 CTTATGA 7mer-A1 dme-miR-970-3p 3L - 2556176 2556243 3'utr msn FlyBase G25513.1 TGAACTTGTGCTTATGAAATTCACCACGACAACGTTTCAATTAGTAAATGTGCTAAGAAAACTCGATC 13 2556204 0.706290568 7 12 83 0.882352941 1.176091259 0 0.230769231 0.411764706 13 2 0 15 3L:2556176-2556243 7 7 2546 FBgn0010909 7320.6 159.8166667 245.3066667 0.000956206 0.043800188 0.02853571 4 -29 -12.5 0.1 dme-miR-980-3p 6mer3-8 GGCAGC 3L 2556488 2556493 - 3L_2556488_2556493_- 0.999665936 1 0.999832968 0.000236244 msn FBtr0333364|FBtr0333362|FBtr0072959|FBtr0333365|FBtr0072956|FBtr0072958|FBtr0072957|FBtr0333363 2555772|2555772|2555772|2554845|2554845|2554845|2554845|2555772 2556555|2556555|2556555|2556555|2556555|2556555|2556555|2556555 3L - 2556491 2556541 3'utr msn FlyBase G33747.1 AACCAATCCAATTCAATCCAATCCAATCGACGATCGATGATCGTGGCAGGC 16 2556503 0.847041539 6 13 77 0.8 1.204119983 0.05 0.1875 0.35 16 4 0 16 3L:2556491-2556541 2 msn FBtr0072957|FBtr0333363|FBtr0072956|FBtr0072958|FBtr0072959|FBtr0333365|FBtr0333364|FBtr0333362 2554845|2555772|2554845|2554845|2555772|2554845|2555772|2555772 2556555|2556555|2556555|2556555|2556555|2556555|2556555|2556555 GGCAGC 6mer3-8 dme-miR-980-3p 3L - 2556446 2556537 3'utr msn FlyBase G25515.1 AATCCAATTCAATCCAATCCAATCGACGATCGATGATCGTGGCAGGCAGCCTTCGATCGACGGCCCAGCGATCGATTTGCTCAACCGGCAAC 15 2556488 0.938673689 9 15 59 1 1.255272505 0.166666667 0.133333333 0.277777778 15 0 0 18 3L:2556446-2556537 6 4.5 2547 FBgn0010909 7320.6 159.8166667 245.3066667 0.000614704 0.028157264 0.018344385 10 -5 2.5 0.1 dme-miR-33-5p 8mer-A1 CAATGCAA 3L 2595437 2595444 + 3L_2595437_2595444_+ 0.634552243 0.634080782 0.634316513 0.00033333 dos FBtr0072926|FBtr0072927 2595045|2595045 2595590|2595590 3L + 2595284 2595471 3'utr dos FlyBase G27392.1 ATTTCTGTGTGCTGTTTTGAATCTGTAATCTGTAACCCGTATCTGAATCTATGTCGTATTCGTATTTAAATCGTGCTTCCAACACTTCCATGTTTATTGTTAAGCTTCGGAATCAAAATGTAACCATGACAAACGATCTTAGTGCTAATTTTACAATGCAAACAATTATTTTATATACGCAAGCGAAA 142 2595424 0.884786622 36 132 1197 0.933333333 1.447158031 0.116666667 0.225352113 0.388888889 142 7 5 168 3L:2595284-2595471 8 dos FBtr0072926|FBtr0072927 2595045|2595045 2595590|2595590 CAATGCAA 8mer-A1 dme-miR-33-5p 3L + 2595373 2595472 3'utr dos FlyBase G20739.2 ATGTTTATTGTTAAGCTTCGGAATCAAAATGTAACCATGACAAACGATCTTAGTGCTAATTTTACAATGCAAACAATTATTTTATATACGCAAGCGAAAT 49 2595425 0.711057503 18 44 309 0.941176471 1.329058719 0.088235294 0.285714286 0.485294118 49 2 2 64 3L:2595373-2595472 8 12.5 2548 FBgn0016794 1172.68 41.23 62.95666667 0.010659344 0.303177298 0.198549267 13 12 12.5 0.1 dme-miR-79-3p 6mer3-8 TAGCTT 3L 2595548 2595553 + 3L_2595548_2595553_+ 0.995329243 0.995948361 0.995638802 0.000437841 dos FBtr0072926|FBtr0072927 2595045|2595045 2595590|2595590 3L + 2595491 2595587 3'utr dos FlyBase G27393.1 TATATGGTAACAAATTATTTACAATTTAATAATGTAACTCGTGTGCGACACAAGCTGTAGCTTGATTTTGTGCTTTAAAAAATATATATACAATAAT 40 2595559 0.986557692 13 40 349 1 1.698970004 0.06 0.125 0.3 40 0 0 50 3L:2595491-2595587 6 dos FBtr0072926|FBtr0072927 2595045|2595045 2595590|2595590 TAGCTT 6mer3-8 dme-miR-79-3p 3L + 2595513 2595600 3'utr dos FlyBase G20740.1 AATTTAATAATGTAACTCGTGTGCGACACAAGCTGTAGCTTGATTTTGTGCTTTAAAAAATATATATACAATAATACCAATTTTGTGT 24 2595559 0.987019227 10 24 208 1 1.491361694 0.161290323 0.291666667 0.451612903 24 0 0 31 3L:2595513-2595600 6 23 2549 FBgn0016794 1172.68 41.23 62.95666667 0.019613194 0.557846228 0.365330651 -11 -11 -11 0.1 dme-bantam-3p 6mer2-7 GATCTC 3L 26226162 26226167 + 3L_26226162_26226167_+ 0.99558044 0.978100672 0.986840556 0.012360014 CG40160 FBtr0333380 26225913 26229433 3L + 26226131 26226182 3'utr CG40160 FlyBase G32715.1 GAAAACGAGTCTGTGTATATTACAAAATTGAGATCTCTGGAACTATAAAGGT 11 26226168 0.97818973 3 10 67 0.923076923 1.079181246 0.076923077 0.181818182 0.307692308 11 1 0 12 3L:26226131-26226182 6 CG40160 FBtr0333380 26225913 26229433 GATCTC 6mer2-7 dme-bantam-3p 3L + 26226152 26226177 3'utr CG40160 FlyBase G24741.1 ACAAAATTGAGATCTCTGGAACTATA 5 26226168 0.662444302 2 5 25 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3L:26226152-26226177 6 7.5 2550 FBgn0058160 1218.203333 81.38333333 124.1133333 0.006156608 0.092156461 0.06042864 -6 -6 -6 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 2641033 2641038 + 3L_2641033_2641038_+ 0.756742369 0.754967088 0.755854728 0.001255327 MEP-1 FBtr0072931|FBtr0072933|FBtr0290340|FBtr0072936|FBtr0072934|FBtr0072932|FBtr0072935 2641015|2641015|2641015|2641015|2641015|2641015|2641015 2641984|2641984|2641984|2641984|2641984|2641984|2641984 3L + 2641014 2641143 stop_codon MEP-1 FlyBase G27420.1 TAAAGAGCATGTTGGATCAACCAAAAACCTAATCTCGCAACGTTTGCAGCATTGACAGCGCTTTAACATTAGTTTCGTTTTTAAGCCGAACGCGACATTGGCGCCTCACGGTCCCGCTCCTTTACTTCTG 69 2641043 0.825875524 18 63 353 0.914634146 1.273001272 0.073170732 0.130434783 0.268292683 69 4 3 75 3L:2641014-2641143 6 MEP-1 FBtr0072935|FBtr0072932|FBtr0072934|FBtr0072936|FBtr0290340|FBtr0072933|FBtr0072931 2641015|2641015|2641015|2641015|2641015|2641015|2641015 2641984|2641984|2641984|2641984|2641984|2641984|2641984 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 2641010 2641088 stop_codon MEP-1 FlyBase G20763.1 AGATTAAAGAGCATGTTGGATCAACCAAAAACCTAATCTCGCAACGTTTGCAGCATTGACAGCGCTTTAACATTAGTTT 21 2641057 0.957728059 10 19 106 0.9375 1.477121255 0.15625 0.333333333 0.5625 21 2 0 30 3L:2641010-2641088 6 23.5 2551 FBgn0035357 2000.076667 48.38333333 74.09333333 0.01174955 0.485704444 0.317167536 -10 -24 -17 0.1 dme-miR-1012-3p 6mer2-7 TGACTA 3L 2641496 2641501 + 3L_2641496_2641501_+ 0.983084665 0.993398553 0.988241609 0.007293029 MEP-1 FBtr0072931|FBtr0072933|FBtr0290340|FBtr0072936|FBtr0072934|FBtr0072932|FBtr0072935 2641015|2641015|2641015|2641015|2641015|2641015|2641015 2641984|2641984|2641984|2641984|2641984|2641984|2641984 3L + 2641430 2641520 3'utr MEP-1 FlyBase G27422.1 ACATATATATTTAACTATATTTAAAGCATATTATGAAGAAGCCGCCAGAGCGCATCGTCAGCATGATGACTATGTAAATTAGTTAAAAACT 31 2641501 0.970555489 11 28 166 0.923076923 1.255272505 0.153846154 0.161290323 0.333333333 31 2 1 36 3L:2641430-2641520 6 MEP-1 FBtr0072935|FBtr0072932|FBtr0072934|FBtr0072936|FBtr0290340|FBtr0072933|FBtr0072931 2641015|2641015|2641015|2641015|2641015|2641015|2641015 2641984|2641984|2641984|2641984|2641984|2641984|2641984 TGACTA 6mer2-7 dme-miR-1012-3p 3L + 2641281 2641509 3'utr MEP-1 FlyBase G20765.1 TCACTTGCTGCGGCTACAGGATACGCGATACACATAACGCTAACGGCATAGATTCACTAGAGATACTAGTTACGGATTTTAGTTACATACGTTTTGGAGTGTGCACATAAGTTGAAGTTGTAGCTACTACTAAAATATACCACATACATACATATATATTTAACTATATTTAAAGCATATTATGAAGAAGCCGCCAGAGCGCATCGTCAGCATGATGACTATGTAAATT 49 2641496 0.980043356 23 43 287 0.897058824 1.484299839 0.25 0.346938776 0.529411765 49 6 1 61 3L:2641281-2641509 6 16 2552 FBgn0035357 2000.076667 48.38333333 74.09333333 0.007999693 0.330692387 0.215943855 -5 0 -2.5 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 3L 2641556 2641561 + 3L_2641556_2641561_+ 0.999978967 0.999997609 0.999988288 1.32E-05 MEP-1 FBtr0072931|FBtr0072933|FBtr0290340|FBtr0072936|FBtr0072934|FBtr0072932|FBtr0072935 2641015|2641015|2641015|2641015|2641015|2641015|2641015 2641984|2641984|2641984|2641984|2641984|2641984|2641984 3L + 2641526 2641602 3'utr MEP-1 FlyBase G27423.1 ATTTATACGAGAACTACGAGTATCCAAATGTGTGTTGCAGTATGTATATACATTTTGAAAAGGTCCCCGCCCCGCAG 28 2641556 0.972607606 9 27 189 1 1.544068044 0.228571429 0.214285714 0.371428571 28 0 0 35 3L:2641526-2641602 6 MEP-1 FBtr0072935|FBtr0072932|FBtr0072934|FBtr0072936|FBtr0290340|FBtr0072933|FBtr0072931 2641015|2641015|2641015|2641015|2641015|2641015|2641015 2641984|2641984|2641984|2641984|2641984|2641984|2641984 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 2641518 2641578 3'utr MEP-1 FlyBase G20765.2 ACTAAACTATTTATACGAGAACTACGAGTATCCAAATGTGTGTTGCAGTATGTATATACAT 15 2641556 0.980043341 5 13 97 0.95 1.278753601 0.15 0.214285714 0.45 14 1 0 19 3L:2641518-2641578 6 15 2553 FBgn0035357 2000.076667 48.38333333 74.09333333 0.007499713 0.310024113 0.202447364 0 0 0 0.1 dme-bantam-3p 6mer3-8 TGATCT 3L 2641735 2641740 + 3L_2641735_2641740_+ 0.999989777 0.999998645 0.999994211 6.22E-06 MEP-1 FBtr0072931|FBtr0072933|FBtr0290340|FBtr0072936|FBtr0072934|FBtr0072932|FBtr0072935 2641015|2641015|2641015|2641015|2641015|2641015|2641015 2641984|2641984|2641984|2641984|2641984|2641984|2641984 3L + 2641612 2641772 3'utr MEP-1 FlyBase G27424.1 GTGCCTCGCTTCGTTCTTCTCTCGAATCTTCTAGCTTATTTGTACGAACAGTCATGATGATGATGAGGCAGAGAGGAGGAAGTTGCATGAAGCGAAGCGTGGGGGGGAAGGACTCTTCTAAACTGATCTGAGAGACGACGAGACGTTCGACATTTTAATTT 255 2641735 0.986680811 16 241 1215 0.962837838 1.977723605 0.476351351 0.133333333 0.253378378 255 9 2 285 3L:2641612-2641772 6 MEP-1 FBtr0072935|FBtr0072932|FBtr0072934|FBtr0072936|FBtr0290340|FBtr0072933|FBtr0072931 2641015|2641015|2641015|2641015|2641015|2641015|2641015 2641984|2641984|2641984|2641984|2641984|2641984|2641984 TGATCT 6mer3-8 dme-bantam-3p 3L + 2641657 2641764 3'utr MEP-1 FlyBase G20766.1 GAACAGTCATGATGATGATGAGGCAGAGAGGAGGAAGTTGCATGAAGCGAAGCGTGGGGGGGAAGGACTCTTCTAAACTGATCTGAGAGACGACGAGACGTTCGACAT 176 2641735 0.968935979 15 167 825 0.937037037 2.102090526 0.462962963 0.392045455 0.603703704 176 16 1 253 3L:2641657-2641764 6 159 2554 FBgn0035357 2000.076667 48.38333333 74.09333333 0.079496953 3.286255598 2.145942055 0 0 0 0.1 dme-miR-14-3p 6mer3-8 AAGACT 3L 265513 265518 + 3L_265513_265518_+ 0.99996711 0.999999969 0.99998354 2.33E-05 mRpL17 FBtr0310415 265443 265932 3L + 265436 265533 stop_codon mRpL17 FlyBase G26746.1 GTTCACTAATAGCTCTTTTCACTAACCGCCTGTTTATTTAGTAGATTAGCAAGCAGTTTGTCGCTTAGAATTCACGTAAGACTTAAAAGCATCTTTAT 49 265512 0.981346297 10 47 343 0.964912281 1.740362689 0.087719298 0.142857143 0.263157895 49 2 0 55 3L:265436-265533 6 mRpL17 FBtr0310415|FBtr0072503 265443|265443 265932|265596 AAGACT 6mer3-8 dme-miR-14-3p 3L + 265470 265534 3'utr mRpL17 FlyBase G20223.1 TATTTAGTAGATTAGCAAGCAGTTTGTCGCTTAGAATTCACGTAAGACTTAAAAGCATCTTTATT 26 265512 0.871114006 8 25 173 1 1.505149978 0.21875 0.153846154 0.3125 26 0 0 32 3L:265470-265534 6 21.5 2555 FBgn0035122 140.4333333 18.93666667 28.89666667 0.153097555 1.135363492 0.744030453 1 1 1 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 3L 27083335 27083340 - 3L_27083335_27083340_- 0.756101289 0.675421828 0.715761559 0.057049022 CG40228 FBtr0113841 27082089 27083460 3L - 27083316 27083426 3'utr CG40228 FlyBase G39587.1 TAAATTGCTAGAGCCCTCTAAATTATACCATAAAATAAGTTTAATACAAAAAATTTAGCATAATAGCGAGATTGAAATAAACATTTTTGACTTATTAAAATAAGCTGAACC 48 27083340 0.808217654 12 44 415 0.98245614 1.447158031 0.052631579 0.14893617 0.298245614 47 0 1 56 3L:27083316-27083426 6 CG40228 FBtr0113841 27082089 27083460 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 27083302 27083378 3'utr CG40228 FlyBase G29908.1 AAAAATTTAGCATAATAGCGAGATTGAAATAAACATTTTTGACTTATTAAAATAAGCTGAACCCATGAAATTCTAAC 31 27083340 0.988977688 9 29 281 0.958333333 1.361727836 0.041666667 0.387096774 0.604166667 31 1 1 46 3L:27083302-27083378 6 31.5 2556 FBgn0063670 550.58 55.34333333 84.84333333 0.057212394 0.569174246 0.371272542 0 0 0 0.1 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA 3L 27156053 27156060 + 3L_27156053_27156060_+ 0.601171788 0.627006213 0.614089 0.018267679 vtd FBtr0344093 27147810 27157999 3L + 27156035 27156070 3'utr vtd FlyBase G32749.1 ATGAAACCGATGAGCAATTTGAAGAACGTGTTTTAA 8 27156045 0.80493186 3 6 37 0.666666667 0.77815125 0.333333333 0.125 0.222222222 8 3 0 6 3L:27156035-27156070 8 vtd FBtr0344093 27147810 27157999 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p 3L + 27156035 27156094 3'utr vtd FlyBase G24766.1 ATGAAACCGATGAGCAATTTGAAGAACGTGTTTTAAACAAGAGAGCCGCCCACCTTTTTA 6 27156053 0.965967021 5 5 30 0.9 0.954242509 0.4 0.333333333 0.6 6 1 0 9 3L:27156035-27156094 8 5.5 2557 FBgn0260987 2370.69 125.3933333 192.4 0.00232 0.043861981 0.028586279 8 0 4 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 2718675 2718682 - 3L_2718675_2718682_- 0.500109447 0.500119039 0.500114243 6.79E-06 Mrtf FBtr0306331 2717613 2719787 3L - 2718662 2718708 3'utr Mrtf FlyBase G33796.1 CGTAAAGTAGTTAAATCCTGCGGCGTGTACTTAACGCACATTTTGTA 148 2718683 0.856178598 8 142 1096 0.963636364 2.201397124 0.218181818 0.114864865 0.206060606 148 6 0 159 3L:2718662-2718708 8 Mrtf FBtr0306331 2717613 2719787 GTACTTAA 8mer-A1 dme-miR-252-5p 3L - 2718660 2718706 3'utr Mrtf FlyBase G25564.1 TAAAGTAGTTAAATCCTGCGGCGTGTACTTAACGCACATTTTGTAAC 96 2718683 0.829986631 7 96 709 1 2.193124598 0.230769231 0.46875 0.673076923 96 0 0 156 3L:2718660-2718706 8 122 2558 FBgn0052296 573.0466667 9.693333333 14.89 0.212897146 12.58596974 8.193418402 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 27420971 27420976 + 3L_27420971_27420976_+ 0.998040315 0.999991423 0.999015869 0.001379636 Dbp80 FBtr0331783|FBtr0331783|FBtr0331783 27391041|27391041|27391041 27422159|27422159|27422159 3L + 27420943 27420981 intron-3'utr Dbp80 FlyBase G32785.1 TGCCCGTAGACCTTGATGGGATGGCTGACTGTGAAACTT 25 27420968 0.8315868 3 24 149 0.966666667 1.462397998 0.066666667 0.16 0.3 25 1 0 29 3L:27420943-27420981 6 Dbp80 FBtr0331783|FBtr0331783|FBtr0331783 27391041|27391041|27391041 27422159|27422159|27422159 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 27420955 27420987 3'utr Dbp80 FlyBase G24795.1 TTGATGGGATGGCTGACTGTGAAACTTATTTAC 7 27420968 0.773677516 3 7 44 1 1.113943352 0 0.571428571 0.769230769 7 0 0 13 3L:27420955-27420987 6 15.5 2559 FBgn0024804 412.37 35.54666667 54.31666667 0.037587603 0.436046512 0.285363608 3 3 3 0.1 dme-miR-252-5p 6mer3-8 GTACTT 3L 2768674 2768679 - 3L_2768674_2768679_- 0.812524628 0.816057831 0.814291229 0.00249835 CG9977 FBtr0073016 2768464 2769383 3L - 2768624 2768685 3'utr CG9977 FlyBase G33808.1 ACTTTTGTACTTTCGTTTCGTCCCGAGAGCGTTAATGGAACAGCAGTGCAAGGTATTCCATT 23 2768670 0.941067843 4 20 175 0.9 1.130333768 0.133333333 0.217391304 0.4 23 2 1 27 3L:2768624-2768685 6 CG9977 FBtr0073016 2768464 2769383 GTACTT 6mer3-8 dme-miR-252-5p 3L - 2768649 2768688 3'utr CG9977 FlyBase G25568.1 TATACTTTTGTACTTTCGTTTCGTCCCGAGAGCGTTAATG 13 2768670 0.722802908 2 13 116 1 1.361727836 0 0.307692308 0.608695652 13 0 0 23 3L:2768649-2768688 6 16.5 2560 FBgn0035371 904.8966667 36.27333333 55.58666667 0.018234126 0.454879618 0.296833773 -9 -9 -9 0.1 dme-miR-31a-5p 7mer-m8 TCTTGCC 3L 2769056 2769062 - 3L_2769056_2769062_- 0.514560285 0.661588761 0.588074523 0.103964849 CG9977 FBtr0073016 2768464 2769383 3L - 2769053 2769234 3'utr CG9977 FlyBase G33810.1 AGAACACAAAGTTACTATTACCATTGTATTGCTTAGTTTAGCTCGAGCGGAATTCTTGGTTGCTTTTCGTTAGCATTTAAAGTCTTCGACATAGTATTTAGCACTCGCTTTAGCCGCAGGAGTATTCTCTCCGTTCACCTATCCAACATGACTCTCTAATCCCCAAAACTAATCTTGCCCCA 33 2769076 0.98861351 14 29 267 0.914285714 1.505149978 0.028571429 0.060606061 0.114285714 33 3 0 32 3L:2769053-2769234 7 CG9977 FBtr0073016 2768464 2769383 TCTTGCC 7mer-m8 dme-miR-31a-5p 3L - 2769041 2769096 3'utr CG9977 FlyBase G25569.1 CTATCCAACATGACTCTCTAATCCCCAAAACTAATCTTGCCCCAAGAATTTATCCC 6 2769081 0.991146157 4 4 41 0.5 0.77815125 0 0.5 0.75 6 6 0 6 3L:2769041-2769096 7 2 2561 FBgn0035371 904.8966667 36.27333333 55.58666667 0.002210197 0.055136923 0.035979851 14 19 16.5 0.1 dme-miR-252-5p 8mer-m1 GTACTTAG 3L 2785689 2785696 + 3L_2785689_2785696_+ 0.600647333 0.62497612 0.612811726 0.017203059 pgant6 FBtr0333442|FBtr0072972|FBtr0072973 2785657|2785657|2785657 2786010|2786010|2786010 3L + 2785618 2785738 stop_codon pgant6 FlyBase G27471.1 CGCTGGACAACTACTCGCAGGACCTCGTCCTCAGCCTGTAACCGCTGCCCTGCAATAGTATCACTTGCCATGTACTTAGAACACTTCGATGTAAATAACTAGGCTAGATAGGTTGTACGGC 208 2785688 0.978281747 15 196 1318 0.947761194 1.626682466 0.063432836 0.221153846 0.395522388 208 9 5 254 3L:2785618-2785738 8 pgant6 FBtr0072973|FBtr0333442|FBtr0072972 2785657|2785657|2785657 2786010|2786010|2786010 GTACTTAG 8mer-m1 dme-miR-252-5p 3L + 2785630 2785741 stop_codon pgant6 FlyBase G20799.1 ACTCGCAGGACCTCGTCCTCAGCCTGTAACCGCTGCCCTGCAATAGTATCACTTGCCATGTACTTAGAACACTTCGATGTAAATAACTAGGCTAGATAGGTTGTACGGCCGC 139 2785688 0.885150218 11 130 817 0.937198068 2.28780173 0.033816425 0.388489209 0.589371981 139 13 0 194 3L:2785630-2785741 8 160 2562 FBgn0035375 484.66 21.71 33.32666667 0.330128337 7.369875633 4.800960192 1 1 1 0.1 dme-miR-980-3p 6mer3-8 GGCAGC 3L 2786872 2786877 - 3L_2786872_2786877_- 0.997207574 0.998737744 0.997972659 0.001081944 Tet FBtr0309120|FBtr0309118|FBtr0333880|FBtr0309119|FBtr0309117|FBtr0333881 2786205|2786485|2786205|2786485|2786205|2786485 2788549|2788549|2788549|2788549|2788549|2788549 3L - 2786797 2786955 3'utr Tet FlyBase G33824.1 AATTGTTGTATAAAACTCAATGAATAATTTGCATCCATCCAAAAGGTAACATACAATTAAAGATTAGAATGCAAATGTGGCAGCGCAACTGAATTTCAAATCAAATTAGTCTACATATACATATAAATATATTTTGCACAAAATAAAACAGAAGAGCGG 90 2786879 0.954854973 25 89 417 0.990566038 1.720159303 0.160377358 0.155555556 0.283018868 90 0 1 105 3L:2786797-2786955 6 Tet FBtr0309117|FBtr0333881|FBtr0333880|FBtr0309119|FBtr0309120|FBtr0309118 2786205|2786485|2786205|2786485|2786205|2786485 2788549|2788549|2788549|2788549|2788549|2788549 GGCAGC 6mer3-8 dme-miR-980-3p 3L - 2786849 2786936 3'utr Tet FlyBase G25576.1 ATGAATAATTTGCATCCATCCAAAAGGTAACATACAATTAAAGATTAGAATGCAAATGTGGCAGCGCAACTGAATTTCAAATCAAATT 68 2786879 0.828179218 10 61 289 0.923809524 1.50965048 0.257142857 0.411764706 0.619047619 68 6 2 97 3L:2786849-2786936 6 57.5 2563 FBgn0263392 3136.83 38.19 58.6 0.018330608 1.505629746 0.981228669 2 2 2 0.1 dme-miR-8-3p 7mer-A1 AGTATTA 3L 2787007 2787013 - 3L_2787007_2787013_- 0.823348538 0.820949595 0.822149066 0.001696278 Tet FBtr0309120|FBtr0309118|FBtr0333880|FBtr0309119|FBtr0309117|FBtr0333881 2786205|2786485|2786205|2786485|2786205|2786485 2788549|2788549|2788549|2788549|2788549|2788549 3L - 2786963 2787120 3'utr Tet FlyBase G33825.1 TATATTTATTTATGCGCAAATCGACGGCAAATAAGGGGTTTAATTCTAGTTATTATTATTTCTGCAAGATTTAGTTTGAAAAACCCAAAAAGACTCGAAACCAATCAAGTATTAAGCACTAAACAACCAACAACTAATACTAAACTTATTTGCCTAAC 147 2787016 0.977716629 23 139 870 0.950819672 1.763427994 0.092896175 0.19047619 0.349726776 147 7 2 174 3L:2786963-2787120 7 Tet FBtr0309117|FBtr0333881|FBtr0333880|FBtr0309119|FBtr0309120|FBtr0309118 2786205|2786485|2786205|2786485|2786205|2786485 2788549|2788549|2788549|2788549|2788549|2788549 AGTATTA 7mer-A1 dme-miR-8-3p 3L - 2786996 2787111 3'utr Tet FlyBase G25576.3 TTATGCGCAAATCGACGGCAAATAAGGGGTTTAATTCTAGTTATTATTATTTCTGCAAGATTTAGTTTGAAAAACCCAAAAAGACTCGAAACCAATCAAGTATTAAGCACTAAACA 80 2787016 0.942573712 15 64 432 0.831858407 1.371067862 0.123893805 0.35 0.539823009 80 16 3 94 3L:2786996-2787111 7 64.5 2564 FBgn0263392 3136.83 38.19 58.6 0.02056216 1.688923802 1.100682594 3 3 3 0.1 dme-miR-980-5p 6mer3-8 GAAAAA 3L 2787692 2787697 - 3L_2787692_2787697_- 0.553474719 0.79510305 0.674288885 0.170857009 Tet FBtr0309120|FBtr0309118|FBtr0333880|FBtr0309119|FBtr0309117|FBtr0333881 2786205|2786485|2786205|2786485|2786205|2786485 2788549|2788549|2788549|2788549|2788549|2788549 3L - 2787664 2787698 3'utr Tet FlyBase G33829.1 TGAAAAAAGATCATTGCCAAAAGTACAAATAAACC 7 2787685 0.893061208 3 6 26 0.857142857 0.77815125 0.285714286 0 0 7 1 0 6 3L:2787664-2787698 6 Tet FBtr0309117|FBtr0333881|FBtr0333880|FBtr0309119|FBtr0309120|FBtr0309118 2786205|2786485|2786205|2786485|2786205|2786485 2788549|2788549|2788549|2788549|2788549|2788549 GAAAAA 6mer3-8 dme-miR-980-5p 3L - 2787645 2787698 3'utr Tet FlyBase G25579.1 TGAAAAAAGATCATTGCCAAAAGTACAAATAAACCATTTTTTAACAAGCAACTA 19 2787687 0.936941274 5 17 67 0.923076923 1.079181246 0.230769231 0.315789474 0.5 19 1 1 24 3L:2787645-2787698 6 9.5 2565 FBgn0263392 3136.83 38.19 58.6 0.003028535 0.248756219 0.162116041 -12 -10 -11 0.1 dme-miR-305-3p 7mer-A1 TGTGCCA 3L 2788070 2788076 - 3L_2788070_2788076_- 0.774737308 0.764434324 0.769585816 0.007285321 Tet FBtr0309120|FBtr0309118|FBtr0333880|FBtr0309119|FBtr0309117|FBtr0333881 2786205|2786485|2786205|2786485|2786205|2786485 2788549|2788549|2788549|2788549|2788549|2788549 3L - 2787963 2788094 3'utr Tet FlyBase G33832.1 TAAATGCGTTTGATTTAGTGTGCCATAGGAGGAGAATTAGAAGAGTTCCCGGAAAAAGAGTTGCAGTTGAAAGAGTACAGTTGACGCTGCCGGGCCAGAGTTGTCACCATTCCACAAGAAAATATCCCAGAT 84 2788076 0.971175122 17 81 470 0.967741935 1.954242509 0.344086022 0.071428571 0.161290323 84 3 0 90 3L:2787963-2788094 7 Tet FBtr0309117|FBtr0333881|FBtr0333880|FBtr0309119|FBtr0309120|FBtr0309118 2786205|2786485|2786205|2786485|2786205|2786485 2788549|2788549|2788549|2788549|2788549|2788549 TGTGCCA 7mer-A1 dme-miR-305-3p 3L - 2788029 2788088 3'utr Tet FlyBase G25581.2 CGTTTGATTTAGTGTGCCATAGGAGGAGAATTAGAAGAGTTCCCGGAAAAAGAGTTGCAG 37 2788076 0.965970725 7 36 220 0.96969697 1.806179974 0.5 0.594594595 0.772727273 37 2 0 64 3L:2788029-2788088 7 49 2566 FBgn0263392 3136.83 38.19 58.6 0.015620866 1.283058392 0.836177474 0 0 0 0.1 dme-miR-307a-3p 6mer3-8 GGTTGT 3L 2788157 2788162 - 3L_2788157_2788162_- 0.993713043 0.98368671 0.988699877 0.007089665 Tet FBtr0309120|FBtr0309118|FBtr0333880|FBtr0309119|FBtr0309117|FBtr0333881 2786205|2786485|2786205|2786485|2786205|2786485 2788549|2788549|2788549|2788549|2788549|2788549 3L - 2788124 2788176 3'utr Tet FlyBase G33833.1 AAACTGAAGAACAGGGTTGTATGACTGAAAATTCACTCAAAGCAAAGAAAAGA 435 2788155 0.95078635 9 390 2256 0.903409091 1.336095698 0.153409091 0.193103448 0.335227273 435 30 21 477 3L:2788124-2788176 6 Tet FBtr0309117|FBtr0333881|FBtr0333880|FBtr0309119|FBtr0309120|FBtr0309118 2786205|2786485|2786205|2786485|2786205|2786485 2788549|2788549|2788549|2788549|2788549|2788549 GGTTGT 6mer3-8 dme-miR-307a-3p 3L - 2788126 2788176 3'utr Tet FlyBase G25582.1 AAACTGAAGAACAGGGTTGTATGACTGAAAATTCACTCAAAGCAAAGAAAA 420 2788155 0.711712695 9 368 2162 0.870716511 1.256050114 0.152647975 0.395238095 0.604361371 420 53 30 559 3L:2788126-2788176 6 416.5 2567 FBgn0263392 3136.83 38.19 58.6 0.132777358 10.90599633 7.107508532 -7 -7 -7 0.1 dme-miR-1008-3p 6mer3-8 AGCTGT 3L 27967276 27967281 - 3L_27967276_27967281_- 0.999994675 0.999873931 0.999934303 8.54E-05 CG17514 FBtr0113748 27967242 27967330 3L - 27967269 27967317 3'utr CG17514 FlyBase G39637.1 AAATCGTTCCAAAAATATCTTGAACTCTTAAAAAATAGCTGTATTTCAA 28 27967298 0.662083248 9 27 226 0.967741935 1.176091259 0 0.107142857 0.193548387 28 0 1 30 3L:27967269-27967317 6 CG17514 FBtr0113748 27967242 27967330 AGCTGT 6mer3-8 dme-miR-1008-3p 3L - 27967270 27967311 3'utr CG17514 FlyBase G29945.1 TTCCAAAAATATCTTGAACTCTTAAAAAATAGCTGTATTTCA 12 27967298 0.68082953 6 12 85 1 1.204119983 0.0625 0.333333333 0.5 12 0 0 16 3L:27967270-27967311 6 11 2568 FBgn0039959 2964.206667 45.44666667 69.68666667 0.003710942 0.242041954 0.157849421 17 17 17 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3L 304240 304245 + 3L_304240_304245_+ 0.999999992 0.999999954 0.999999973 0 RhoGEF3 FBtr0333956|FBtr0333962|FBtr0333952 303882|303882|303882 304315|305292|305292 3L + 304219 304281 5'utr RhoGEF3 FlyBase G26760.1 ATATAAAAATGTCGCCGACTGCTAGTCTAAAATCCTGTCCATACTTGTAATTTTAGGTTACGT 166 304240 0.784507104 11 162 1013 0.98019802 2.29666519 0.04950495 0.198795181 0.341584158 166 4 0 198 3L:304219-304281 6 RhoGEF3 FBtr0333952|FBtr0333962|FBtr0333956 303882|303882|303882 305292|305292|304315 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3L + 304213 304282 5'utr RhoGEF3 FlyBase G20229.1 AGTTTTATATAAAAATGTCGCCGACTGCTAGTCTAAAATCCTGTCCATACTTGTAATTTTAGGTTACGTG 144 304240 0.764155675 9 138 859 0.966824645 2.309630167 0.037914692 0.347222222 0.55450237 144 7 0 204 3L:304213-304282 6 150 2569 FBgn0264707 2055.463333 66.05 101.8633333 0.072976247 2.271006813 1.472561275 0 0 0 0.1 dme-miR-1007-3p 6mer2-7 GAGCTT 3L 3051618 3051623 + 3L_3051618_3051623_+ 0.98780885 0.974784514 0.981296682 0.009209642 CG32485 FBtr0072985 3051513 3051765 3L + 3051479 3051637 stop_codon CG32485 FlyBase G27518.1 TACCTCATCCCCGACATCCTGCCAACGGACATGTAAGGCTTCCGCCACGAAATCAGCATCCGACGAGGCTTCTGCTAGGCGTAGACATATCTCCAAAGAGAACCGAAACCAGTACCTAAGTTTGCAAGGAGGCTTCTGAGAGCTTTTATCCAGTATAGT 52 3051614 0.954857614 13 52 241 1 1.770852012 0.338983051 0.134615385 0.237288136 52 0 0 59 3L:3051479-3051637 6 CG32485 FBtr0072985 3051513 3051765 GAGCTT 6mer2-7 dme-miR-1007-3p 3L + 3051481 3051642 stop_codon CG32485 FlyBase G20831.1 CCTCATCCCCGACATCCTGCCAACGGACATGTAAGGCTTCCGCCACGAAATCAGCATCCGACGAGGCTTCTGCTAGGCGTAGACATATCTCCAAAGAGAACCGAAACCAGTACCTAAGTTTGCAAGGAGGCTTCTGAGAGCTTTTATCCAGTATAGTACTCT 38 3051615 0.972591559 13 35 211 0.85 1.707570176 0.15 0.447368421 0.65 38 9 0 51 3L:3051481-3051642 6 15 2570 FBgn0052485 128.92 14.17333333 21.81 0.116351226 1.058325494 0.687757909 4 3 3.5 0.1 dme-miR-305-5p 8mer-m1 AGTACAAT 3L 3051708 3051715 + 3L_3051708_3051715_+ 0.570313725 0.570226959 0.570270342 6.13E-05 CG32485 FBtr0072985 3051513 3051765 3L + 3051646 3051720 3'utr CG32485 FlyBase G27519.1 TGTAAATCGATGTGTTTAACAAGTTGATTGTAAAGCGTATTCTATTGGACACCACAACTATTAGTACAATGCTAA 34 3051706 0.982885938 8 30 229 0.875 1.243038049 0.05 0.147058824 0.275 34 4 1 35 3L:3051646-3051720 8 CG32485 FBtr0072985 3051513 3051765 AGTACAAT 8mer-m1 dme-miR-305-5p 3L + 3051679 3051719 3'utr CG32485 FlyBase G20832.1 AGCGTATTCTATTGGACACCACAACTATTAGTACAATGCTA 14 3051706 0.674387683 5 14 88 1 1.397940009 0 0.5 0.72 14 0 0 25 3L:3051679-3051719 8 20 2571 FBgn0052485 128.92 14.17333333 21.81 0.155134967 1.411100659 0.917010546 2 2 2 0.1 dme-bantam-3p 8mer-A1 TGATCTCA 3L 3056302 3056309 - 3L_3056302_3056309_- 0.631135597 0.631135944 0.63113577 2.12E-07 CG32486 FBtr0073004 3055906 3056724 3L - 3056250 3056499 3'utr CG32486 FlyBase G33920.1 GCAGACGTAACGCGGTAGGTTGTAACCTAAGTTTAGTGTAGATTCGGCTACATTTTGTACATGAGATGAGATAGCGCCATTTTATGGAGACACCTTTCAATAGCTATGTTAACTCTACTGTTAGTGCTGGTGGCGAAATGGATACGATACGATGGACAAGACGACTGATGTGTGTTTGACTAGCGTTTAATGATCTCACAGGAAGGAGCCAGCCCACGCTAACGCGATAATACCGATAATAACCATAAAA 543 3056309 0.820477851 36 523 3349 0.963549921 2.005752329 0.272583201 0.136279926 0.256735341 543 18 5 608 3L:3056250-3056499 8 CG32486 FBtr0073004 3055906 3056724 TGATCTCA 8mer-A1 dme-bantam-3p 3L - 3056260 3056469 3'utr CG32486 FlyBase G25647.1 GTTTAGTGTAGATTCGGCTACATTTTGTACATGAGATGAGATAGCGCCATTTTATGGAGACACCTTTCAATAGCTATGTTAACTCTACTGTTAGTGCTGGTGGCGAAATGGATACGATACGATGGACAAGACGACTGATGTGTGTTTGACTAGCGTTTAATGATCTCACAGGAAGGAGCCAGCCCACGCTAACGCGATAATACCGATAAT 344 3056309 0.976287521 32 326 2093 0.955637708 1.868392503 0.210720887 0.398255814 0.617375231 344 18 6 517 3L:3056260-3056469 8 365 2572 FBgn0266918 501.6666667 25.67666667 39.09333333 0.727574751 14.21524082 9.336630286 0 0 0 0.1 dme-miR-305-3p 6mer3-8 ATGTGC 3L 3056653 3056658 - 3L_3056653_3056658_- 0.975872014 0.971889482 0.973880748 0.002816053 CG32486 FBtr0073004 3055906 3056724 3L - 3056632 3056745 stop_codon CG32486 FlyBase G33921.2 ATGTTTCTGCTGAACAAGTAGACGCTTTCGCTGCTCAGCGAACTAAGATTTTCAAATTAGCTTAAGTTTGTTGTTTCAAACTCTTGAATGTGCAAAACCTAGATATAGTTGACT 148 3056661 0.973119223 18 134 1056 0.920731707 1.701855693 0.231707317 0.101351351 0.18902439 148 11 2 151 3L:3056632-3056745 6 CG32486 FBtr0073004 3055906 3056724 ATGTGC 6mer3-8 dme-miR-305-3p 3L - 3056633 3056701 3'utr CG32486 FlyBase G25649.1 AAGATTTTCAAATTAGCTTAAGTTTGTTGTTTCAAACTCTTGAATGTGCAAAACCTAGATATAGTTGAC 58 3056660 0.804554754 6 40 444 0.677777778 1.183269844 0.266666667 0.379310345 0.6 58 26 3 61 3L:3056633-3056701 6 61 2573 FBgn0266918 501.6666667 25.67666667 39.09333333 0.121594684 2.37569778 1.560368349 3 2 2.5 0.1 dme-miR-252-5p 6mer3-8 GTACTT 3L 305714 305719 - 3L_305714_305719_- 0.92413576 0.992157383 0.958146571 0.048098535 fwd FBtr0072516 305391 306358 3L - 305697 305751 3'utr fwd FlyBase G32951.1 TTGAAATGTTTGAGTCGCTGTCCGCTGTGTTTGTACTTGCATATTTAACTAAGTA 33 305721 0.654926989 11 30 320 0.911111111 1.010723865 0.355555556 0.303030303 0.488888889 33 1 3 41 3L:305697-305751 6 fwd FBtr0072516 305391 306358 GTACTT 6mer3-8 dme-miR-252-5p 3L - 305677 305741 3'utr fwd FlyBase G24938.1 TGAGTCGCTGTCCGCTGTGTTTGTACTTGCATATTTAACTAAGTAAACGAAAAAATAAATCCCAA 22 305721 0.986996608 5 20 173 0.942857143 1.51851394 0.485714286 0.409090909 0.628571429 22 2 0 33 3L:305677-305741 6 23.5 2574 FBgn0004373 1952.316667 35.47333333 54.29333333 0.012036982 0.662469461 0.432833988 2 2 2 0.1 dme-miR-12-5p 6mer3-8 AATACT 3L 305847 305852 - 3L_305847_305852_- 0.795371604 0.803889837 0.79963072 0.006023277 fwd FBtr0072516 305391 306358 3L - 305826 305899 3'utr fwd FlyBase G32952.1 AAGCATCTAATTCCAATATATAGTCATAAGTATAAGGGTATATGCTTAATACTGCTGCAGCATAGAATTTTAAT 11 305882 0.990233923 6 9 94 0.846153846 1.041392685 0 0.181818182 0.307692308 11 2 0 11 3L:305826-305899 6 fwd FBtr0072516 305391 306358 AATACT 6mer3-8 dme-miR-12-5p 3L - 305817 305899 3'utr fwd FlyBase G24939.1 AAGCATCTAATTCCAATATATAGTCATAAGTATAAGGGTATATGCTTAATACTGCTGCAGCATAGAATTTTAATACAGCAATA 15 305851 0.982190485 9 14 109 1 1.322219295 0 0.4 0.571428571 15 0 0 21 3L:305817-305899 6 5.5 2575 FBgn0004373 1952.316667 35.47333333 54.29333333 0.002817166 0.155046044 0.101301572 30 -1 14.5 0.1 dme-miR-1003-3p 7mer-A1 TGTGAGA 3L 306060 306066 - 3L_306060_306066_- 0.598378281 0.598382561 0.598380421 3.04E-06 fwd FBtr0072516 305391 306358 3L - 306000 306106 3'utr fwd FlyBase G32954.1 AAGAGAAAAGTGTAAATGCCGAGTGTAATTTTAGTTTGCCTGTGAGAGATCGCGAGACACTCGCTATTCCATTTTGAAATTCATAATTTACATGTACATTTGTGCAC 31 306090 0.98726957 7 28 243 0.885714286 0.792391689 0.114285714 0.129032258 0.228571429 31 0 4 31 3L:306000-306106 7 fwd FBtr0072516 305391 306358 TGTGAGA 7mer-A1 dme-miR-1003-3p 3L - 306042 306099 3'utr fwd FlyBase G24941.1 AAGTGTAAATGCCGAGTGTAATTTTAGTTTGCCTGTGAGAGATCGCGAGACACTCGCT 20 306065 0.82699994 8 17 160 0.884615385 1.06069784 0.192307692 0.25 0.423076923 20 2 1 23 3L:306042-306099 7 14.5 2576 FBgn0004373 1952.316667 35.47333333 54.29333333 0.007427074 0.408757752 0.26706778 24 -1 11.5 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 3L 3090163 3090168 + 3L_3090163_3090168_+ 0.642224873 0.689074563 0.665649718 0.033127741 CG11486 FBtr0332113|FBtr0332113|FBtr0073000|FBtr0073000|FBtr0072998|FBtr0072998|FBtr0072994|FBtr0072994 3088301|3088301|3088301|3088301|3088301|3088301|3088301|3088301 3090406|3090406|3090406|3090406|3090406|3090406|3090406|3090406 3L + 3090128 3090173 3'utr CG11486 FlyBase G27541.1 AGTAGATGGTTCGTTTACCAGCTTAGTGTGATTTATACTTATTTTG 23 3090160 0.719582455 4 23 224 1 1.505149978 0.03125 0.217391304 0.4375 23 0 0 32 3L:3090128-3090173 6 CG11486 FBtr0332113|FBtr0332113|FBtr0072994|FBtr0072994|FBtr0072998|FBtr0072998|FBtr0073000|FBtr0073000 3088301|3088301|3088301|3088301|3088301|3088301|3088301|3088301 3090406|3090406|3090406|3090406|3090406|3090406|3090406|3090406 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 3L + 3090128 3090169 3'utr CG11486 FlyBase G20854.1 AGTAGATGGTTCGTTTACCAGCTTAGTGTGATTTATACTTAT 26 3090160 0.73747605 3 26 243 1 1.568201724 0 0.230769231 0.459459459 26 0 0 37 3L:3090128-3090169 6 21 2577 FBgn0035397 2018.183333 59.24333333 91.30666667 0.010405398 0.354470264 0.229994159 3 3 3 0.1 dme-miR-14-3p 6mer3-8 AAGACT 3L 3090350 3090355 + 3L_3090350_3090355_+ 1 1 1 0 CG11486 FBtr0332113|FBtr0073000|FBtr0072998|FBtr0072994 3088301|3088301|3088301|3088301 3090406|3090406|3090406|3090406 3L + 3090328 3090370 3'utr CG11486 FlyBase G27542.1 AAATTATTGTGTACATCAACGTAAGACTAATTATTTAATTGAA 11 3090349 0.836169669 5 10 83 0.909090909 1 0.181818182 0 0 11 1 0 10 3L:3090328-3090370 6 CG11486 FBtr0332113|FBtr0072994|FBtr0072998|FBtr0073000 3088301|3088301|3088301|3088301 3090406|3090406|3090406|3090406 AAGACT 6mer3-8 dme-miR-14-3p 3L + 3090328 3090366 3'utr CG11486 FlyBase G20855.1 AAATTATTGTGTACATCAACGTAAGACTAATTATTTAAT 9 3090349 0.849205586 3 8 75 0.857142857 1.079181246 0 0.555555556 0.714285714 9 2 0 12 3L:3090328-3090366 6 9.5 2578 FBgn0035397 2018.183333 59.24333333 91.30666667 0.004707204 0.160355596 0.104044977 1 1 1 0.1 dme-miR-33-5p 7mer-m8 CAATGCA 3L 3115152 3115158 - 3L_3115152_3115158_- 0.658341874 0.634570727 0.6464563 0.016808777 prominin-like FBtr0073118|FBtr0306258 3114557|3114448 3115919|3115919 3L - 3115130 3115229 3'utr prominin-like FlyBase G33926.1 AAATATGATCCAAAATACCAAAACTGCCATTTTAATTTAGAAAAGAGCAGAGCACAGAGTTGGGAGTTATTCAATGCATTTAATGTATTTATTTTAGAAA 41 3115159 0.755576246 14 38 341 0.933333333 1.322219295 0.244444444 0.097560976 0.177777778 41 2 1 42 3L:3115130-3115229 7 prominin-like FBtr0306258|FBtr0073118 3114448|3114557 3115919|3115919 CAATGCA 7mer-m8 dme-miR-33-5p 3L - 3115138 3115224 3'utr prominin-like FlyBase G25655.1 TGATCCAAAATACCAAAACTGCCATTTTAATTTAGAAAAGAGCAGAGCACAGAGTTGGGAGTTATTCAATGCATTTAATGTATTTAT 23 3115159 0.860197531 9 23 182 1 1.579783597 0.289473684 0.391304348 0.631578947 23 0 0 38 3L:3115138-3115224 7 15.5 2579 FBgn0026189 6878.313333 173.88 267.93 0.002253459 0.089141937 0.057850931 1 1 1 0.1 dme-miR-79-3p 7mer-A1 AGCTTTA 3L 3115409 3115415 - 3L_3115409_3115415_- 0.823349562 0.82247798 0.822913771 0.000616314 prominin-like FBtr0073118|FBtr0073120|FBtr0306258|FBtr0337056|FBtr0073119 3114557|3115333|3114448|3115333|3115333 3115919|3115919|3115919|3115919|3115919 3L - 3115381 3115465 3'utr prominin-like FlyBase G33927.1 GATGAGTCCCTTGAAGAAGTTGGCCATTCGCCGGGTCGCACGGCCGCAGAAGCTTTAAGGAATCTCATAATTTTATTATGCACAC 34 3115398 0.814270906 11 30 220 0.886363636 1.591064607 0.454545455 0.205882353 0.386363636 34 5 0 39 3L:3115381-3115465 7 prominin-like FBtr0073119|FBtr0337056|FBtr0306258|FBtr0073120|FBtr0073118 3115333|3115333|3114448|3115333|3114557 3115919|3115919|3115919|3115919|3115919 AGCTTTA 7mer-A1 dme-miR-79-3p 3L - 3115349 3115445 3'utr prominin-like FlyBase G25656.1 TGGCCATTCGCCGGGTCGCACGGCCGCAGAAGCTTTAAGGAATCTCATAATTTTATTATGCACACACTCAGAGCAGGCGAGACATACCCAAAAAGGA 28 3115398 0.973783479 9 24 149 0.880952381 1.568201724 0.285714286 0.357142857 0.571428571 28 5 0 37 3L:3115349-3115445 7 17.5 2580 FBgn0026189 6878.313333 173.88 267.93 0.002544228 0.100644122 0.065315567 -17 -17 -17 0.1 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3L 3154257 3154263 + 3L_3154257_3154263_+ 0.57687603 0.59567946 0.586277745 0.013296082 BtbVII FBtr0307305|FBtr0307302|FBtr0332096|FBtr0307304 3153532|3153532|3153532|3153532 3154934|3154934|3154934|3155678 3L + 3154202 3154308 3'utr BtbVII FlyBase G27568.1 TTATTAGTGTTAATCGCGAACATCAAATGATTTGTAAGCAACTGCAGCTAAAAAGTGGTGCTGTGTGCCAGCAGCCGACACAAACCTTGCGGAATCCGCTCCATATT 24 3154228 0.973050746 10 24 140 1 1.414973348 0.153846154 0.083333333 0.153846154 24 0 0 26 3L:3154202-3154308 7 BtbVII FBtr0332096|FBtr0307304|FBtr0307302|FBtr0307305 3153532|3153532|3153532|3153532 3154934|3155678|3154934|3154934 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3L + 3154216 3154294 3'utr BtbVII FlyBase G20874.1 CGCGAACATCAAATGATTTGTAAGCAACTGCAGCTAAAAAGTGGTGCTGTGTGCCAGCAGCCGACACAAACCTTGCGGA 19 3154257 0.826023829 7 17 86 0.935483871 1.462397998 0.225806452 0.526315789 0.709677419 19 2 0 29 3L:3154216-3154294 7 10.5 2581 FBgn0263108 1294.493333 34.92 53.58666667 0.008111282 0.300687285 0.195944265 29 0 14.5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 3161865 3161870 + 3L_3161865_3161870_+ 0.85201675 0.517963016 0.684989883 0.236211637 pfk FBtr0073028|FBtr0073027 3161723|3161723 3162019|3162019 3L + 3161832 3161930 3'utr pfk FlyBase G27592.1 ATGTACATCAACCATATCCTATCTCCTGATGAAACCAAAATTGAGTCCGGAAGAGCAGCAAGAGATGCTATTCTAGAGGTAGTTTTGTAGACTTAGTTC 28 3161873 0.943897244 8 28 121 1 1.477121255 0.3 0.071428571 0.133333333 28 0 0 30 3L:3161832-3161930 6 pfk FBtr0073028|FBtr0073027 3161723|3161723 3162019|3162019 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 3161801 3161907 3'utr pfk FlyBase G20885.1 AGGGTTTAACTTCATGTTGTCCCATCAGTGTATGTACATCAACCATATCCTATCTCCTGATGAAACCAAAATTGAGTCCGGAAGAGCAGCAAGAGATGCTATTCTAG 11 3161873 0.91851142 6 11 47 1 1.204119983 0.375 0.363636364 0.5625 11 0 0 16 3L:3161801-3161907 6 12.5 2582 FBgn0035405 277.3633333 17.59666667 26.86333333 0.04506724 0.710361811 0.465318278 -8 -8 -8 0.1 dme-miR-986-5p 6mer3-8 ATTCGA 3L 3184670 3184675 + 3L_3184670_3184675_+ 0.96048584 0.702405262 0.831445551 0.182490472 Girdin FBtr0332097|FBtr0073036|FBtr0332098|FBtr0332099|FBtr0073035 3184665|3184270|3184270|3184665|3184665 3185287|3185287|3185287|3185287|3185287 3L + 3184614 3184693 stop_codon Girdin FlyBase G27614.1 AGCGGACCGAAGACAAGAGCAATAGCATCTGGTATGAGTACGGCTGCGTCTAGATCATTCGAACAGTATACGTCCACAAC 28 3184680 0.944426751 10 28 114 1 1.505149978 0 0.142857143 0.25 28 0 0 32 3L:3184614-3184693 6 Girdin FBtr0073035|FBtr0332098|FBtr0332099|FBtr0332097|FBtr0073036 3184665|3184270|3184665|3184665|3184270 3185287|3185287|3185287|3185287|3185287 ATTCGA 6mer3-8 dme-miR-986-5p 3L + 3184639 3184693 stop_codon Girdin FlyBase G20900.1 CATCTGGTATGAGTACGGCTGCGTCTAGATCATTCGAACAGTATACGTCCACAAC 24 3184681 0.94474195 6 22 99 0.928571429 1.591064607 0.047619048 0.5 0.714285714 24 3 0 39 3L:3184639-3184693 6 24 2583 FBgn0035411 1033.61 24.37 37.36 0.02321959 0.984817398 0.642398287 -10 -11 -10.5 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 3L 3184710 3184716 + 3L_3184710_3184716_+ 0.618701381 0.619295145 0.618998263 0.000419809 Girdin FBtr0332097|FBtr0073036|FBtr0332098|FBtr0332099|FBtr0073035 3184665|3184270|3184270|3184665|3184665 3185287|3185287|3185287|3185287|3185287 3L + 3184695 3184737 3'utr Girdin FlyBase G27615.1 TGAACTCGAACATAATGCATTTGCTGACGAAGTATTATTTCGT 56 3184712 0.665012073 9 54 359 0.953125 1.785329835 0.28125 0.125 0.234375 56 3 0 61 3L:3184695-3184737 7 Girdin FBtr0073035|FBtr0332098|FBtr0332099|FBtr0332097|FBtr0073036 3184665|3184270|3184665|3184665|3184270 3185287|3185287|3185287|3185287|3185287 TGCATTT 7mer-m8 dme-miR-277-3p 3L + 3184695 3184746 3'utr Girdin FlyBase G20901.1 TGAACTCGAACATAATGCATTTGCTGACGAAGTATTATTTCGTTTTAGAAAT 51 3184714 0.647639022 7 49 329 0.957746479 1.832508913 0.197183099 0.294117647 0.492957746 51 3 0 68 3L:3184695-3184746 7 52 2584 FBgn0035411 1033.61 24.37 37.36 0.050309111 2.13377103 1.391862955 -2 -4 -3 0.1 dme-miR-92b-3p 7mer-m1 TGCAATT 3L 3198044 3198050 - 3L_3198044_3198050_- 0.757149878 0.764122409 0.760636144 0.004930302 CG32276 FBtr0073107|FBtr0073106 3197861|3197861 3198320|3198320 3L - 3197946 3198111 3'utr CG32276 FlyBase G33982.1 AAGTCCATTTAAAGCATTTTGCATTAATTGATTTAACTGTAAGCTCTGCAATGTGCATTCCTGCAATTCTCTCCTAAGCAACTGAATAATGATCCCCGATCATTTATAGGCGATAAATGCATTTTTAAGATGCTTCTCGGCGCAGTTTTAAATAGTGCAAAGTGTT 51 3198054 0.983207724 16 51 389 1 1.785329835 0.049180328 0.156862745 0.295081967 51 0 0 61 3L:3197946-3198111 7 CG32276 FBtr0073106|FBtr0073107 3197861|3197861 3198320|3198320 TGCAATT 7mer-m1 dme-miR-92b-3p 3L - 3197871 3198100 3'utr CG32276 FlyBase G25695.1 AAGCATTTTGCATTAATTGATTTAACTGTAAGCTCTGCAATGTGCATTCCTGCAATTCTCTCCTAAGCAACTGAATAATGATCCCCGATCATTTATAGGCGATAAATGCATTTTTAAGATGCTTCTCGGCGCAGTTTTAAATAGTGCAAAGTGTTAAAGCGTTGTTTTCTAATGCAAAGACGAGTAGAGAAGAAACTATGAGTACATAACAATGATGAATATATGATAAT 52 3198025 0.983662081 24 48 357 0.938271605 1.880813592 0.12345679 0.384615385 0.604938272 52 5 0 76 3L:3197871-3198100 7 20.5 2585 FBgn0047135 1536 262.94 398.89 0.013346354 0.077964555 0.051392615 4 -25 -10.5 0.1 dme-miR-283-5p 6mer3-8 TGATAT 3L 3211003 3211008 + 3L_3211003_3211008_+ 1 1 1 0 gry FBtr0073042 3210992 3211348 3L + 3210983 3211031 stop_codon gry FlyBase G27647.1 AGAACAAGTAGGGATGATACTGATATAATGCCGCTTTAGTTTAAGTGTT 20 3211012 0.749163617 9 20 165 1 1.397940009 0.4 0.2 0.36 20 0 0 25 3L:3210983-3211031 6 gry FBtr0073042 3210992 3211348 TGATAT 6mer3-8 dme-miR-283-5p 3L + 3210970 3211029 stop_codon gry FlyBase G20931.1 CCTCTGAAGCAACAGAACAAGTAGGGATGATACTGATATAATGCCGCTTTAGTTTAAGTG 10 3211017 0.977659883 5 10 68 1 1.176091259 0.533333333 0.3 0.533333333 10 0 0 15 3L:3210970-3211029 6 12.5 2586 FBgn0035416 1009.253333 26.48 40.54 0.012385394 0.472054381 0.308337444 -9 -14 -11.5 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3L 3211167 3211173 + 3L_3211167_3211173_+ 0.521223855 0.521223854 0.521223854 0 gry FBtr0073042 3210992 3211348 3L + 3211110 3211287 3'utr gry FlyBase G27649.1 ACATACATAAATAACTATATATTTAGAGAGTTGCATAGCGTAATACTTGAGAGTGTGTGTGATTGTATTGTATAATGTATTGTTAAATGGGCCAAGACGCACTAGACATTATTGTTAGTTGATTACGGCGTTTTAGATAAGCAGTGCTAAGTCCTGGTCAGTACCGCAAGTTGCACAT 70 3211173 0.93764961 24 66 608 0.956521739 1.467361417 0.27173913 0.2 0.391304348 70 2 2 88 3L:3211110-3211287 7 gry FBtr0073042 3210992 3211348 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 3211128 3211277 3'utr gry FlyBase G20932.1 ATATTTAGAGAGTTGCATAGCGTAATACTTGAGAGTGTGTGTGATTGTATTGTATAATGTATTGTTAAATGGGCCAAGACGCACTAGACATTATTGTTAGTTGATTACGGCGTTTTAGATAAGCAGTGCTAAGTCCTGGTCAGTACCGCA 44 3211165 0.990940311 16 38 397 0.903225806 1.271066772 0.322580645 0.318181818 0.516129032 44 4 2 56 3L:3211128-3211277 7 38.5 2587 FBgn0035416 1009.253333 26.48 40.54 0.038147013 1.453927492 0.949679329 -6 2 -2 0.1 dme-miR-33-5p 8mer-A1 CAATGCAA 3L 3220842 3220849 + 3L_3220842_3220849_+ 0.465930267 0.487823859 0.476877063 0.015481113 CG12034 FBtr0073043 3220717 3220925 3L + 3220737 3220910 3'utr CG12034 FlyBase G27653.1 AGCTCAATGCGCATTTAAAATCCACGTGTAGCGTACTATAAGCAGCGATATATGTTTGACTAGAGTTATAGCGCTCTTACTTGATCTTTTTATTCGTGTAACCGTCAATGCAATTCCATGGTCTCTTTCTGTGTAACGTCATCCATATCCCAGGAATAATAGTTCAATAAAAGT 265 3220854 0.935713125 28 257 2399 0.973214286 2.037426498 0.044642857 0.222641509 0.386904762 265 7 2 327 3L:3220737-3220910 8 CG12034 FBtr0073043 3220717 3220925 CAATGCAA 8mer-A1 dme-miR-33-5p 3L + 3220776 3220910 3'utr CG12034 FlyBase G20935.1 AAGCAGCGATATATGTTTGACTAGAGTTATAGCGCTCTTACTTGATCTTTTTATTCGTGTAACCGTCAATGCAATTCCATGGTCTCTTTCTGTGTAACGTCATCCATATCCCAGGAATAATAGTTCAATAAAAGT 153 3220854 0.735813767 25 152 1316 0.995744681 2.369215857 0.093617021 0.405228758 0.612765957 153 1 0 234 3L:3220776-3220910 8 127 2588 FBgn0035421 132.3333333 9.493333333 14.43 0.959697733 13.37780899 8.801108801 -12 -12 -12 0.1 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3L 3232405 3232410 + 3L_3232405_3232410_+ 0.99998187 0.999974437 0.999978153 5.30E-06 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3232295 3232433 intron-3'utr CG11505 FlyBase G27688.1 CAGCAGTTGCCGCTGCTCGTTAGGACGCGGAAACGAGAGCAGAGGAAGGAGAGAGCAGCAGGCGATGCTTGGACCAGTTATCATATTAGTAGGCAACGACGAAGAATGAATGGTGCATACCCTTTCTCCAGCTATATTT 222 3232405 0.965250586 14 216 1141 0.974074074 2.419955748 0.096296296 0.175675676 0.322222222 222 7 0 263 3L:3232295-3232433 6 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3L + 3232333 3232429 3'utr CG11505 FlyBase G20959.1 GCAGAGGAAGGAGAGAGCAGCAGGCGATGCTTGGACCAGTTATCATATTAGTAGGCAACGACGAAGAATGAATGGTGCATACCCTTTCTCCAGCTAT 140 3232405 0.961632127 10 138 688 0.990909091 2.338456494 0.127272727 0.392857143 0.613636364 140 2 0 218 3L:3232333-3232429 6 160.5 2589 FBgn0035424 4177.206667 52.67666667 80.83333333 0.038422806 3.046889831 1.98556701 0 0 0 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3L 3232919 3232924 + 3L_3232919_3232924_+ 0.999999998 0.99999998 0.999999989 0 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3232828 3232959 3'utr CG11505 FlyBase G27690.2 CTCATTTTTGCTTACACATCAGAACGTAATGTTTATAGCCAAAACAGAAGTACACAGATAAGAGTGCGTAGCCCACATAGCTATGTCTCTGCTAGTCTCACAGGTTAGGGTTACTTCTATTATTTAGATATA 74 3232925 0.978720204 21 72 548 0.988888889 1.949390007 0.088888889 0.148648649 0.3 74 1 0 89 3L:3232828-3232959 6 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3L + 3232837 3232943 3'utr CG11505 FlyBase G20964.1 GCTTACACATCAGAACGTAATGTTTATAGCCAAAACAGAAGTACACAGATAAGAGTGCGTAGCCCACATAGCTATGTCTCTGCTAGTCTCACAGGTTAGGGTTACTT 34 3232925 0.984246319 7 33 261 0.978723404 1.662757832 0.021276596 0.294117647 0.489361702 34 1 0 46 3L:3232837-3232943 6 37.5 2590 FBgn0035424 4177.206667 52.67666667 80.83333333 0.008977291 0.711890147 0.463917526 -6 -6 -6 0.1 dme-miR-7-5p 6mer2-7 TCTTCC 3L 3233143 3233148 + 3L_3233143_3233148_+ 0.999994051 0.999991181 0.999992616 2.05E-06 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3233003 3233174 3'utr CG11505 FlyBase G27691.1 ATTGTAACATTTTAACGGATGATCTTGTTTGCGCAAGAGGGTTTTTTTTTAATTAACTTGATTATGGGGATTCTCGTACTTAGTTCACGACTTAAGGGATCCTTTACACAGACACACCTGAATACGCCTAGACTAACTTATCTTCCCCCCAGACACCGACCCGTGAATACCC 199 3233145 0.869628357 16 196 1270 0.981900452 2.336459734 0.180995475 0.095477387 0.185520362 199 4 0 217 3L:3233003-3233174 6 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 TCTTCC 6mer2-7 dme-miR-7-5p 3L + 3233109 3233171 3'utr CG11505 FlyBase G20966.1 CACAGACACACCTGAATACGCCTAGACTAACTTATCTTCCCCCCAGACACCGACCCGTGAATA 57 3233145 0.962062124 4 56 279 0.987179487 1.886490725 0.256410256 0.298245614 0.487179487 57 1 0 77 3L:3233109-3233171 6 93.5 2591 FBgn0035424 4177.206667 52.67666667 80.83333333 0.022383379 1.774979434 1.156701031 -2 -2 -2 0.1 dme-miR-7-5p 6mer2-7 TCTTCC 3L 3233578 3233583 + 3L_3233578_3233583_+ 0.823118168 0.819739719 0.821428944 0.00238896 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3233559 3233615 3'utr CG11505 FlyBase G27693.1 AGCTGCTTCATCTTCATCCTCTTCCCAAATTATTGATGCTCACCTTAGGTATACATT 21 3233592 0.795930226 8 21 183 1 1.414973348 0.038461538 0.19047619 0.346153846 21 0 0 26 3L:3233559-3233615 6 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 TCTTCC 6mer2-7 dme-miR-7-5p 3L + 3233578 3233613 3'utr CG11505 FlyBase G20968.1 TCTTCCCAAATTATTGATGCTCACCTTAGGTATACA 9 3233592 0.658856735 4 8 60 1 1.079181246 0.083333333 0.222222222 0.416666667 9 0 0 12 3L:3233578-3233613 5 6.5 2592 FBgn0035424 4177.206667 52.67666667 80.83333333 0.001556064 0.123394292 0.080412371 -14 -14 -14 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 3233990 3233995 + 3L_3233990_3233995_+ 0.999998905 0.999998781 0.999998843 7.07E-08 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3233970 3234090 3'utr CG11505 FlyBase G27696.1 TTTCCATTCGCAACCTCACTACCAAAACGAAGAAAACCCGCGTATTATGATTATCATTCTCTTTAATTAGATGCTTATGATTATGAACCCACTGTGAACACACTGAACAATGTTTTCCCAA 42 3233987 0.842278861 13 37 219 0.888888889 1.681241237 0.074074074 0.238095238 0.407407407 42 6 0 48 3L:3233970-3234090 6 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 3233973 3234030 3'utr CG11505 FlyBase G20971.1 CCATTCGCAACCTCACTACCAAAACGAAGAAAACCCGCGTATTATGATTATCATTCTC 14 3233987 0.824402364 4 13 45 0.95 1.278753601 0.5 0.285714286 0.5 14 1 0 19 3L:3233973-3234030 6 14 2593 FBgn0035424 4177.206667 52.67666667 80.83333333 0.003351522 0.265772322 0.173195876 3 3 3 0.1 dme-miR-184-5p 7mer-A1 GATAAGA 3L 3234200 3234206 + 3L_3234200_3234206_+ 0.782754003 0.770781561 0.776767782 0.008465765 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3234188 3234231 3'utr CG11505 FlyBase G27698.1 ATATAAGAGAAGGATAAGAAAACTGAAAAATCAATATATATACA 17 3234202 0.965421836 4 17 41 1 1.361727836 0 0.352941176 0.52173913 17 0 0 23 3L:3234188-3234231 7 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 GATAAGA 7mer-A1 dme-miR-184-5p 3L + 3234185 3234230 3'utr CG11505 FlyBase G20974.1 AAAATATAAGAGAAGGATAAGAAAACTGAAAAATCAATATATATAC 15 3234202 0.918899134 5 15 40 1 1.322219295 0 0.333333333 0.523809524 15 0 0 21 3L:3234185-3234230 7 14.5 2594 FBgn0035424 4177.206667 52.67666667 80.83333333 0.003471219 0.27526419 0.179381443 -2 -2 -2 0.1 dme-miR-34-5p 6mer2-7 ACTGCC 3L 3234396 3234401 + 3L_3234396_3234401_+ 0.903205063 0.999999967 0.951602515 0.06844433 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3234331 3234418 3'utr CG11505 FlyBase G27699.2 AACCCATGTGGCACCATCCGCCCATCAAGTCCCTTCAAATCGCATCTGATCACAAACGACACACAACTGCCTCTAGGACATAAACAGC 16 3234402 0.929571885 6 15 58 0.941176471 1.204119983 0.058823529 0.0625 0.117647059 16 1 0 16 3L:3234331-3234418 6 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 ACTGCC 6mer2-7 dme-miR-34-5p 3L + 3234335 3234418 3'utr CG11505 FlyBase G20976.1 CATGTGGCACCATCCGCCCATCAAGTCCCTTCAAATCGCATCTGATCACAAACGACACACAACTGCCTCTAGGACATAAACAGC 14 3234402 0.965294032 5 10 53 0.736842105 0.84509804 0.263157895 0.285714286 0.473684211 14 4 1 14 3L:3234335-3234418 6 6.5 2595 FBgn0035424 4177.206667 52.67666667 80.83333333 0.001556064 0.123394292 0.080412371 -6 -6 -6 0.1 dme-miR-7-5p 6mer2-7 TCTTCC 3L 3234631 3234636 + 3L_3234631_3234636_+ 0.999918279 0.999824513 0.999871396 6.63E-05 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3234548 3234682 3'utr CG11505 FlyBase G27700.2 CAGATAGTATACCTTGCTCAGTGTTTCGTCTCGTACCCGCCACACAAATGTATCTTTAAATAATTCATAGTTTATAGTTTGTATCTTCCCCTCCAAATCGATGAGAAAGACCCAATCAAACTGTAAGCCAACTAA 35 3234634 0.987690095 15 32 311 0.926829268 1.278753601 0.292682927 0.142857143 0.268292683 35 2 1 38 3L:3234548-3234682 6 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 TCTTCC 6mer2-7 dme-miR-7-5p 3L + 3234610 3234670 3'utr CG11505 FlyBase G20979.1 ATTCATAGTTTATAGTTTGTATCTTCCCCTCCAAATCGATGAGAAAGACCCAATCAAACTG 19 3234634 0.986906514 3 18 160 1 1.361727836 0.086956522 0.157894737 0.304347826 19 0 0 23 3L:3234610-3234670 6 18.5 2596 FBgn0035424 4177.206667 52.67666667 80.83333333 0.004428797 0.351199139 0.228865979 -3 -3 -3 0.1 dme-miR-307a-3p 6mer2-7 GTTGTG 3L 3234732 3234737 + 3L_3234732_3234737_+ 1 0.996053478 0.998026739 0.002790597 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3234695 3234792 3'utr CG11505 FlyBase G27701.1 ACACACACATTTCTTTGGAATGTTCTCAAATGATTTTGTTGTGCTCATCACTCACTGTCGGCTGACAACAGAAAATTATACAAAACAACACTCTACAC 19 3234751 0.99375579 11 14 156 0.714285714 1.176091259 0.095238095 0.105263158 0.19047619 19 6 0 15 3L:3234695-3234792 6 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 GTTGTG 6mer2-7 dme-miR-307a-3p 3L + 3234715 3234775 3'utr CG11505 FlyBase G20980.1 TGTTCTCAAATGATTTTGTTGTGCTCATCACTCACTGTCGGCTGACAACAGAAAATTATAC 13 3234750 0.969453362 7 13 75 1 1.255272505 0.333333333 0.307692308 0.5 13 0 0 18 3L:3234715-3234775 6 9.5 2597 FBgn0035424 4177.206667 52.67666667 80.83333333 0.002274247 0.180345504 0.117525773 -19 -18 -18.5 0.1 dme-miR-283-5p 8mer-A1 TGATATTA 3L 3234957 3234964 + 3L_3234957_3234964_+ 0.445286166 0.516934091 0.481110128 0.050662716 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3234818 3234998 3'utr CG11505 FlyBase G27702.1 TAACACACTGTACAGTTGAACCTCAATAGGGCGGACTGCGGACTGCGCCTTAGGTGAATCAATGGATGAGGAACAGCATGTGGCCAGAGTGGAGCCAGCTGTTCGTTGGCGACGTCTCCAAGCTTCCGACAATGAGATGTGATATTATGCAATTGACAAATCATCAATTGTGTGCGACAAA 77 3234963 0.973348285 23 68 461 0.903225806 1.924279286 0.193548387 0.171052632 0.322580645 76 9 0 84 3L:3234818-3234998 8 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 TGATATTA 8mer-A1 dme-miR-283-5p 3L + 3234907 3234974 3'utr CG11505 FlyBase G20982.1 TGGAGCCAGCTGTTCGTTGGCGACGTCTCCAAGCTTCCGACAATGAGATGTGATATTATGCAATTGAC 47 3234962 0.829281749 10 43 298 0.86746988 1.079181246 0.253012048 0.425531915 0.674698795 47 6 5 72 3L:3234907-3234974 8 43.5 2598 FBgn0035424 4177.206667 52.67666667 80.83333333 0.010413658 0.825792571 0.53814433 -6 -5 -5.5 0.1 dme-miR-34-5p 8mer-A1 CACTGCCA 3L 3235651 3235658 + 3L_3235651_3235658_+ 0.678346329 0.678178297 0.678262313 0.000118794 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3235547 3235663 3'utr CG11505 FlyBase G27706.2 CCTATGGAATGTGCCCCCCAACAGACCACTGTACATACCCTTAGCTATACATTTACATTTCCGGGGGCAATTTTCTCCTGATTTCATGCGATCACCTTCTTTGGCACTGCCATCAAA 30 3235647 0.98699469 12 24 209 0.823529412 1.447158031 0.088235294 0.133333333 0.235294118 30 6 0 28 3L:3235547-3235663 8 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 CACTGCCA 8mer-A1 dme-miR-34-5p 3L + 3235603 3235663 3'utr CG11505 FlyBase G20988.1 ATTTCCGGGGGCAATTTTCTCCTGATTTCATGCGATCACCTTCTTTGGCACTGCCATCAAA 16 3235647 0.984673081 8 15 124 0.95 1.278753601 0 0.25 0.4 16 1 0 19 3L:3235603-3235663 8 11 2599 FBgn0035424 4177.206667 52.67666667 80.83333333 0.002633339 0.20882111 0.136082474 4 4 4 0.1 dme-miR-14-3p 6mer2-7 AGACTG 3L 3313345 3313350 + 3L_3313345_3313350_+ 0.999999669 0.999985709 0.999992689 9.90E-06 ZnT63C FBtr0073056|FBtr0073054|FBtr0073055|FBtr0073057|FBtr0073058|FBtr0330104 3313011|3313011|3313011|3313011|3313011|3313011 3313476|3313476|3314009|3313476|3313476|3313476 3L + 3313214 3313374 stop_codon ZnT63C FlyBase G27714.1 CGGGAGCTTCAGTTGCAGGCCGAACAGCAGTATCAGGAGCAGGTGTCACCACTGAGTACCAGGAATGGCGACGAGGTGGCACTCTAATTAGGAGCCTAGTTTAACGTTAATTGTGCAAACCGCTGCAATGGAGACTGGTCTGCCATGGTGCAGCTTTCGTG 66 3313342 0.959214535 14 63 311 0.959459459 1.550228353 0.337837838 0.106060606 0.202702703 66 2 1 71 3L:3313214-3313374 6 ZnT63C FBtr0330104|FBtr0073055|FBtr0073057|FBtr0330103|FBtr0073056|FBtr0073054|FBtr0073058 3313011|3313011|3313011|3313299|3313011|3313011|3313011 3313476|3314009|3313476|3313476|3313476|3313476|3313476 AGACTG 6mer2-7 dme-miR-14-3p 3L + 3313286 3313371 stop_codon ZnT63C FlyBase G20995.1 GAGGTGGCACTCTAATTAGGAGCCTAGTTTAACGTTAATTGTGCAAACCGCTGCAATGGAGACTGGTCTGCCATGGTGCAGCTTTC 38 3313342 0.963587387 11 38 198 1 1.763427994 0.206896552 0.342105263 0.568965517 38 0 0 58 3L:3313286-3313371 6 41.5 2600 FBgn0035432 2241.986667 107.03 164.0533333 0.018510369 0.387741755 0.252966515 3 3 3 0.1 dme-miR-1012-3p 7mer-A1 TGACTAA 3L 3313740 3313746 + 3L_3313740_3313746_+ 0.776763632 0.817277741 0.797020686 0.028647795 ZnT63C FBtr0073055 3313011 3314009 3L + 3313729 3313769 3'utr ZnT63C FlyBase G27716.2 GGATTAGCAAATGACTAAAGACAGTTTACAAAATACATAGG 14 3313753 0.795231914 4 11 60 0.888888889 1.204119983 0.055555556 0.214285714 0.388888889 14 2 0 16 3L:3313729-3313769 7 ZnT63C FBtr0073055 3313011 3314009 TGACTAA 7mer-A1 dme-miR-1012-3p 3L + 3313727 3313769 3'utr ZnT63C FlyBase G20999.1 ACGGATTAGCAAATGACTAAAGACAGTTTACAAAATACATAGG 7 3313753 0.752063075 4 6 30 0.909090909 1 0.272727273 0.428571429 0.636363636 7 1 0 10 3L:3313727-3313769 7 9.5 2601 FBgn0035432 2241.986667 107.03 164.0533333 0.004237313 0.088760161 0.057907997 -13 -13 -13 0.1 dme-bantam-3p 7mer-m8 TGATCTC 3L 3320887 3320893 + 3L_3320887_3320893_+ 0.656774913 0.661614258 0.659194586 0.003421973 CG42456 FBtr0300240 3320650 3322489 3L + 3320867 3320925 3'utr CG42456 FlyBase G27722.1 CACCATTGGCGAGGTGCGTCTGATCTCGCAGGATGACTACTTTCTGCCCGTGGAGGACA 14 3320886 0.735583011 7 12 66 0.882352941 1.176091259 0.588235294 0.142857143 0.294117647 14 2 0 15 3L:3320867-3320925 7 CG42456 FBtr0300240 3320650 3322489 TGATCTC 7mer-m8 dme-bantam-3p 3L + 3320870 3320924 3'utr CG42456 FlyBase G21003.1 CATTGGCGAGGTGCGTCTGATCTCGCAGGATGACTACTTTCTGCCCGTGGAGGAC 6 3320887 0.976263188 3 6 33 1 0.77815125 0.166666667 0 0 6 0 0 6 3L:3320870-3320924 7 6.5 2602 FBgn0259933 101.7866667 5.366666667 8.34 0.063859052 1.211180124 0.779376499 1 0 0.5 0.1 dme-miR-1008-3p 7mer-m8 AGCTGTG 3L 3322226 3322232 + 3L_3322226_3322232_+ 0.671795761 0.671795793 0.671795777 0 CG42456 FBtr0300240 3320650 3322489 3L + 3322137 3322255 3'utr CG42456 FlyBase G27726.1 GTTATTATGGGTGACATGGTCTCTCTTGTGGAGAATGCTCTTGTAACCAGATTGTGAAATGAAGAAACTCGGTTCAGGAATTCATATTTAGCTGTGCTAACTATTATATTGTATTGTTT 147 3322224 0.820435875 21 142 1328 0.963636364 1.900367129 0.248484848 0.102040816 0.2 147 5 1 159 3L:3322137-3322255 7 CG42456 FBtr0300240 3320650 3322489 AGCTGTG 7mer-m8 dme-miR-1008-3p 3L + 3322136 3322247 3'utr CG42456 FlyBase G21005.1 AGTTATTATGGGTGACATGGTCTCTCTTGTGGAGAATGCTCTTGTAACCAGATTGTGAAATGAAGAAACTCGGTTCAGGAATTCATATTTAGCTGTGCTAACTATTATATTG 101 3322224 0.799609662 20 96 880 0.953642384 2.158362492 0.231788079 0.356435644 0.569536424 101 7 0 144 3L:3322136-3322247 7 69.5 2603 FBgn0259933 101.7866667 5.366666667 8.34 0.682800629 12.95031056 8.333333333 2 2 2 0.1 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 3370478 3370485 - 3L_3370478_3370485_- 0.629243488 0.643067147 0.636155317 0.009774761 YT521-B FBtr0073078 3370449 3371600 3L - 3370450 3370507 3'utr YT521-B FlyBase G34049.1 TGCACGAAGAAACTTAGAGAGAAAGACTGATGCCTAATAAAGACTCAAGCTGATTGCA 87 3370477 0.757700146 7 84 339 0.963302752 1.720159303 0.128440367 0.206896552 0.366972477 87 3 1 105 3L:3370450-3370507 8 YT521-B FBtr0073078 3370449 3371600 AAGACTGA 8mer-A1 dme-miR-14-3p 3L - 3370455 3370508 3'utr YT521-B FlyBase G25745.1 TTGCACGAAGAAACTTAGAGAGAAAGACTGATGCCTAATAAAGACTCAAGCTGA 75 3370494 0.904162336 5 65 274 0.87037037 1.672097858 0.231481481 0.32 0.527777778 75 13 1 94 3L:3370455-3370508 8 76 2604 FBgn0027616 901.75 38.03333333 58.06666667 0.084280566 1.998247152 1.308840413 -8 9 0.5 0.1 dme-miR-988-3p 6mer3-8 ACAAGG 3L 3377622 3377627 + 3L_3377622_3377627_+ 0.994584481 0.999992041 0.997288261 0.00382368 CG12012 FBtr0073076|FBtr0300749|FBtr0346532 3377299|3377299|3377299 3377687|3377687|3377992 3L + 3377591 3377633 3'utr CG12012 FlyBase G27790.1 GTTTTCCAATTGAATAGTGATTTGGCTTTTTACAAGGATTTTA 43 3377612 0.707040914 9 39 403 0.919354839 1.278753601 0.080645161 0.348837209 0.548387097 43 3 2 57 3L:3377591-3377633 6 CG12012 FBtr0346532|FBtr0300749|FBtr0073076 3377299|3377299|3377299 3377992|3377687|3377687 ACAAGG 6mer3-8 dme-miR-988-3p 3L + 3377589 3377632 3'utr CG12012 FlyBase G21047.1 ATGTTTTCCAATTGAATAGTGATTTGGCTTTTTACAAGGATTTT 24 3377612 0.684486737 7 24 227 1 1.477121255 0.033333333 0.208333333 0.366666667 24 0 0 30 3L:3377589-3377632 6 9.5 2605 FBgn0035444 229.66 32.33 49.26666667 0.041365497 0.293844726 0.192828146 10 10 10 0.1 dme-miR-33-5p 7mer-A1 AATGCAA 3L 3401899 3401905 - 3L_3401899_3401905_- 0.782896397 0.782909866 0.782903131 9.55E-06 sty FBtr0073145 3401151 3402955 3L - 3401862 3402226 3'utr sty FlyBase G34066.2 ATTGATATGTGTATGTGTGTGTATGTTGAGGGCGACGAACTTTTCGATAAATTTAGAGCAACCTATATAGACCAGTCTAAATGTGCTTAGAAACCGATATAGATGTACTGCAAACCAAAAGTCAGTTAGTTTACTTTACCAACTACGAAGCCGGAACAAATCTGAGGAGCGAAAATATGGGATAACGAAATCGATTGCTTATGAACTTATTTTATAGTTGAAGATCGATTGGTGGGTTCGTAGTGTTTCCAGCCAGAAGCCCCAAAAATGTGAGCAAGATTGTATATATGATGAAATTTTTAAGCGAAATGCGAGATACAAAATGCAAGCAAATTCCAAATAATAGAAAAACAAAAAACAACAAA 465 3401893 0.96140427 56 446 2218 0.95840868 1.87917783 0.283905967 0.169892473 0.30198915 465 17 6 530 3L:3401862-3402226 7 sty FBtr0073145 3401151 3402955 AATGCAA 7mer-A1 dme-miR-33-5p 3L - 3401866 3402096 3'utr sty FlyBase G25761.1 TTACTTTACCAACTACGAAGCCGGAACAAATCTGAGGAGCGAAAATATGGGATAACGAAATCGATTGCTTATGAACTTATTTTATAGTTGAAGATCGATTGGTGGGTTCGTAGTGTTTCCAGCCAGAAGCCCCAAAAATGTGAGCAAGATTGTATATATGATGAAATTTTTAAGCGAAATGCGAGATACAAAATGCAAGCAAATTCCAAATAATAGAAAAACAAAAAACAA 306 3401893 0.961620028 41 283 1416 0.940042827 1.943494516 0.331905782 0.379084967 0.593147752 306 24 4 439 3L:3401866-3402096 7 156.5 2606 FBgn0014388 33951.58333 1097.95 1702.483333 0.004609505 0.142538367 0.091924542 -12 -12 -12 0.1 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 3468272 3468277 - 3L_3468272_3468277_- 0.999999993 1 0.999999996 0 CG14971 FBtr0073143 3468021 3468780 3L - 3468234 3468302 3'utr CG14971 FlyBase G34136.1 AGAAAGCCTTAATGACCCTTTCATTGTTCCTTAACTGACATCTTTAATTTGGCATTCCAAATTGAATTG 25 3468278 0.985077068 10 23 249 0.925925926 1.397940009 0 0.08 0.148148148 25 2 0 25 3L:3468234-3468302 6 CG14971 FBtr0073143 3468021 3468780 GTTCCT 6mer2-7 dme-miR-276a-3p 3L - 3468240 3468318 3'utr CG14971 FlyBase G25817.1 AACCTATGTAAAAATAAGAAAGCCTTAATGACCCTTTCATTGTTCCTTAACTGACATCTTTAATTTGGCATTCCAAATT 23 3468279 0.988176474 10 22 206 0.939393939 1.014240439 0.03030303 0.347826087 0.545454545 23 0 2 31 3L:3468240-3468318 6 18.5 2607 FBgn0035449 481.2366667 24.29333333 37.37 0.038442624 0.761525796 0.495049505 1 2 1.5 0.1 dme-miR-184-3p 6mer3-8 TCCGTC 3L 3468626 3468631 - 3L_3468626_3468631_- 0.999999992 1 0.999999996 0 CG14971 FBtr0073143 3468021 3468780 3L - 3468599 3468660 3'utr CG14971 FlyBase G34137.1 AGCTAGTTAGTTTGACACTCTTCATTCCTTCCGTCACCGATTCCCTCAACTTCCTCGATGCA 213 3468636 0.734454623 6 211 1698 0.992125984 2.401400541 0.106299213 0.154929577 0.291338583 213 2 0 252 3L:3468599-3468660 6 CG14971 FBtr0073143 3468021 3468780 TCCGTC 6mer3-8 dme-miR-184-3p 3L - 3468554 3468661 3'utr CG14971 FlyBase G25818.1 AAGCTAGTTAGTTTGACACTCTTCATTCCTTCCGTCACCGATTCCCTCAACTTCCTCGATGCATTCCCGCCTTGTGCATTTAGGGGCTAGGCTAGATATATGAGACGT 125 3468636 0.984114619 12 120 977 0.947368421 1.653212514 0.084210526 0.384 0.594736842 125 7 3 180 3L:3468554-3468661 6 164 2608 FBgn0035449 481.2366667 24.29333333 37.37 0.340788663 6.750823271 4.388546963 5 5 5 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA 3L 3505238 3505245 + 3L_3505238_3505245_+ 0.515849003 0.545174819 0.530511911 0.020736472 CG42324 FBtr0334633|FBtr0330142 3505096|3505096 3505316|3505316 3L + 3505190 3505251 3'utr CG42324 FlyBase G27820.1 AATCACGAAGACTGCGTTAAGTTAACAATATGATTTCGTTCCCTTGACTGCATTTAACAATC 21 3505233 0.782574145 11 21 168 1 1.397940009 0.08 0.142857143 0.28 21 0 0 25 3L:3505190-3505251 8 CG42324 FBtr0330142|FBtr0334633 3505096|3505096 3505316|3505316 TGCATTTA 8mer-A1 dme-miR-277-3p 3L + 3505171 3505246 3'utr CG42324 FlyBase G21076.1 TTTTCTAGGCAACGGATTCAATCACGAAGACTGCGTTAAGTTAACAATATGATTTCGTTCCCTTGACTGCATTTAA 19 3505232 0.990981629 10 16 159 0.869565217 1.301029996 0.086956522 0.210526316 0.347826087 19 3 0 20 3L:3505171-3505246 8 12.5 2609 FBgn0259224 58.33333333 1.43 2.216666667 0.214285714 8.741258741 5.639097744 5 6 5.5 0.1 dme-miR-7-5p 7mer-m8 GTCTTCC 3L 3508949 3508955 + 3L_3508949_3508955_+ 0.705950063 0.705949522 0.705949792 4.24E-07 CG42324 FBtr0334634|FBtr0334632|FBtr0334635|FBtr0334636 3508532|3508532|3508532|3508532 3510895|3510895|3510895|3510895 3L + 3508924 3508960 3'utr CG42324 FlyBase G27838.1 TGTTCATTATATGTTACCCCTTAAAGTCTTCCTTTTC 13 3508956 0.922617944 5 10 122 0.769230769 0.698970004 0 0 0 13 2 1 10 3L:3508924-3508960 7 CG42324 FBtr0334636|FBtr0334635|FBtr0334632|FBtr0334634 3508532|3508532|3508532|3508532 3510895|3510895|3510895|3510895 GTCTTCC 7mer-m8 dme-miR-7-5p 3L + 3508913 3508961 3'utr CG42324 FlyBase G21094.1 TTTAGTATGTATGTTCATTATATGTTACCCCTTAAAGTCTTCCTTTTCA 10 3508957 0.992842402 7 9 106 0.909090909 0.698970004 0 0.1 0.181818182 10 0 1 10 3L:3508913-3508961 7 10.5 2610 FBgn0259224 58.33333333 1.43 2.216666667 0.18 7.342657343 4.736842105 -7 -8 -7.5 0.1 dme-miR-980-3p 6mer2-7 GCAGCT 3L 3509070 3509075 + 3L_3509070_3509075_+ 0.999921888 0.999936064 0.999928976 1.00E-05 CG42324 FBtr0334634|FBtr0334632|FBtr0334635|FBtr0334636 3508532|3508532|3508532|3508532 3510895|3510895|3510895|3510895 3L + 3509048 3509086 3'utr CG42324 FlyBase G27839.2 AATCTGAAGCCCAACAGAAATTGCAGCTGAAATCAAAAG 18 3509068 0.809674087 2 17 60 0.95 1.278753601 0.1 0.111111111 0.2 18 1 0 19 3L:3509048-3509086 6 CG42324 FBtr0334636|FBtr0334635|FBtr0334632|FBtr0334634 3508532|3508532|3508532|3508532 3510895|3510895|3510895|3510895 GCAGCT 6mer2-7 dme-miR-980-3p 3L + 3509048 3509084 3'utr CG42324 FlyBase G21096.1 AATCTGAAGCCCAACAGAAATTGCAGCTGAAATCAAA 12 3509068 0.755389678 2 12 36 1 1.230448921 0.058823529 0.333333333 0.529411765 12 0 0 17 3L:3509048-3509084 6 14.5 2611 FBgn0259224 58.33333333 1.43 2.216666667 0.248571429 10.13986014 6.541353383 2 2 2 0.1 dme-miR-92b-3p 8mer-A1 GTGCAATA 3L 3509329 3509336 + 3L_3509329_3509336_+ 0.628099251 0.628915895 0.628507573 0.000577423 CG42324 FBtr0334634|FBtr0334632|FBtr0334635|FBtr0334636 3508532|3508532|3508532|3508532 3510895|3510895|3510895|3510895 3L + 3509187 3509350 3'utr CG42324 FlyBase G27840.1 AACCACGAGAATTCGAAAACTTTGCCCAAGCAAACTTAGGTTACACTGGAAATATATGAATTATATTTATAGGAATATATAGATAATTATGCTATATACGATTTATATTTGATAAGCGCGTTATATTTTCTACATTCCGATTGTGCAATATTTTTTGGTAGTGT 27 3509327 0.973582754 13 26 233 0.96875 1.491361694 0.125 0.074074074 0.21875 27 1 0 31 3L:3509187-3509350 8 CG42324 FBtr0334636|FBtr0334635|FBtr0334632|FBtr0334634 3508532|3508532|3508532|3508532 3510895|3510895|3510895|3510895 GTGCAATA 8mer-A1 dme-miR-92b-3p 3L + 3509315 3509348 3'utr CG42324 FlyBase G21098.1 TCTACATTCCGATTGTGCAATATTTTTTGGTAGT 9 3509327 0.842265092 2 7 92 0.705882353 1.079181246 0.117647059 0.555555556 0.764705882 9 5 0 12 3L:3509315-3509348 8 8.5 2612 FBgn0259224 58.33333333 1.43 2.216666667 0.145714286 5.944055944 3.834586466 2 2 2 0.1 dme-miR-8-3p 6mer2-7 AGTATT 3L 355982 355987 + 3L_355982_355987_+ 0.999999717 0.999999856 0.999999786 1.41E-07 Ptpmeg FBtr0306560|FBtr0306562|FBtr0306563 355526|355526|355526 356050|356050|356050 3L + 355940 356000 3'utr Ptpmeg FlyBase G26774.1 GCGAACCTTATACACTGATAGACATGAGAAGATAAAACTGTTAGTATTTTAGCACCAAATC 64 355981 0.664473635 11 49 408 0.766233766 1.293730757 0.155844156 0.15625 0.298701299 64 16 2 59 3L:355940-356000 6 Ptpmeg FBtr0306562|FBtr0306563|FBtr0306560 355526|355526|355526 356050|356050|356050 AGTATT 6mer2-7 dme-miR-8-3p 3L + 355924 355998 3'utr Ptpmeg FlyBase G20239.1 AAGAGCAACCGAGAATGCGAACCTTATACACTGATAGACATGAGAAGATAAAACTGTTAGTATTTTAGCACCAAA 40 355981 0.988009629 12 29 256 0.7 1.146128036 0.1 0.325 0.55 40 16 2 42 3L:355924-355998 6 45.5 2613 FBgn0261985 1055.98 31.95666667 49.17666667 0.043087937 1.423803067 0.925235545 1 1 1 0.1 dme-miR-33-5p 7mer-A1 AATGCAA 3L 3607701 3607707 + 3L_3607701_3607707_+ 0.782911823 0.78291179 0.782911807 0 Eip63E FBtr0302598|FBtr0073134|FBtr0110925|FBtr0110923|FBtr0110921|FBtr0110924|FBtr0330068|FBtr0073133|FBtr0073131|FBtr0110920|FBtr0073132|FBtr0073135|FBtr0110922|FBtr0301948 3607565|3607565|3607565|3607565|3607565|3607565|3607613|3607565|3607565|3607565|3607565|3607565|3607565|3607565 3610521|3608549|3608549|3608549|3608549|3610521|3608549|3608549|3608549|3608549|3608549|3608549|3608549|3608549 3L + 3607684 3607723 3'utr Eip63E FlyBase G27860.1 AATCGACAGCCATATATAATGCAAGAGGAACTTCTCGCCC 30 3607699 0.6075269 4 22 123 0.787878788 0.937852093 0.212121212 0.1 0.181818182 30 5 2 26 3L:3607684-3607723 7 Eip63E FBtr0110922|FBtr0073133|FBtr0301948|FBtr0110921|FBtr0073132|FBtr0110925|FBtr0073135|FBtr0302598|FBtr0110924|FBtr0330068|FBtr0073131|FBtr0110920|FBtr0073134|FBtr0110923 3607565|3607565|3607565|3607565|3607565|3607565|3607565|3607565|3607565|3607613|3607565|3607565|3607565|3607565 3608549|3608549|3608549|3608549|3608549|3608549|3608549|3610521|3610521|3608549|3608549|3608549|3608549|3608549 AATGCAA 7mer-A1 dme-miR-33-5p 3L + 3607667 3607836 3'utr Eip63E FlyBase G21110.1 CTATCGCATCATCCAGCAATCGACAGCCATATATAATGCAAGAGGAACTTCTCGCCCGCGCAGAAGTTTTGTACTATAATTCTATGATACTTTTTAGTTATTAGTTCGATTTCGCAGTGAGTTAGCTGAGGGAGTTTAGCAGAAGACACGGCACCAACGGCAGCATTTTA 30 3607699 0.956481142 16 29 145 0.930232558 1.602059991 0.302325581 0.4 0.581395349 30 3 0 40 3L:3607667-3607836 7 20.5 2614 FBgn0005640 1126.993333 37.81333333 57.97333333 0.018189992 0.542136812 0.353610856 2 2 2 0.1 dme-miR-79-3p 7mer-m8 TAGCTTT 3L 3615165 3615171 + 3L_3615165_3615171_+ 0.620086088 0.618322742 0.619204415 0.001246912 CG10359 FBtr0290290|FBtr0273204 3615072|3615072 3615244|3615244 3L + 3615135 3615195 3'utr CG10359 FlyBase G27866.1 AATCGATTGCTTGCATTTTAACCCTAGCTTTAGCTTTGAATCTCTCTGTGCGTGTGTGTGT 24 3615170 0.824682188 10 20 234 0.833333333 1.397940009 0.5 0.208333333 0.366666667 24 5 0 25 3L:3615135-3615195 7 CG10359 FBtr0273204|FBtr0290290 3615072|3615072 3615244|3615244 TAGCTTT 7mer-m8 dme-miR-79-3p 3L + 3615127 3615196 3'utr CG10359 FlyBase G21116.1 TAACCCACAATCGATTGCTTGCATTTTAACCCTAGCTTTAGCTTTGAATCTCTCTGTGCGTGTGTGTGTA 19 3615170 0.994499024 7 14 201 0.724137931 1.322219295 0.206896552 0.421052632 0.620689655 19 8 0 21 3L:3615127-3615196 7 14 2615 FBgn0035452 20.66666667 1.506666667 2.33 0.677419355 9.292035398 6.008583691 -5 -5 -5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 365330 365335 + 3L_365330_365335_+ 0.985379948 0.999999543 0.992689746 0.010337618 CG1233 FBtr0072548|FBtr0072549 365245|365245 365681|365681 3L + 365321 365363 3'utr CG1233 FlyBase G26782.1 GAGTTTTATACCAAAACTGTACCAATGTTATTAGTGTTAAGTA 8 365338 0.870981611 4 8 72 1 1 0.1 0.125 0.3 8 0 0 10 3L:365321-365363 6 CG1233 FBtr0072548|FBtr0072549 365245|365245 365681|365681 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 365321 365363 3'utr CG1233 FlyBase G20247.1 GAGTTTTATACCAAAACTGTACCAATGTTATTAGTGTTAAGTA 8 365339 0.854246055 4 7 73 1 1.113943352 0.307692308 0.5 0.692307692 8 0 0 13 3L:365321-365363 6 6.5 2616 FBgn0035137 556 16.52 25.12333333 0.011690647 0.39346247 0.25872363 -8 -9 -8.5 0.1 dme-miR-980-5p 6mer3-8 GAAAAA 3L 3716840 3716845 - 3L_3716840_3716845_- 0.888400402 0.895145931 0.891773166 0.004769789 CG32264 FBtr0308639 3714824 3717391 3L - 3716808 3716857 3'utr CG32264 FlyBase G34145.1 ATTTACATTAAAGAAAAATGGCTGAGAAAAATTCATTAAAGCTTAGGCAT 26 3716839 0.923192659 2 26 85 1 1.447158031 0 0.076923077 0.142857143 26 0 0 28 3L:3716808-3716857 6 CG32264 FBtr0308639 3714824 3717391 GAAAAA 6mer3-8 dme-miR-980-5p 3L - 3716808 3716853 3'utr CG32264 FlyBase G25825.1 ACATTAAAGAAAAATGGCTGAGAAAAATTCATTAAAGCTTAGGCAT 11 3716839 0.868356572 2 11 25 1 1.176091259 0 0.363636364 0.533333333 11 0 0 15 3L:3716808-3716853 6 18.5 2617 FBgn0052264 847.8466667 26.52666667 40.85 0.021819983 0.69741141 0.452876377 -6 -6 -6 0.1 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3L 3803886 3803891 - 3L_3803886_3803891_- 0.999999985 0.99994754 0.999973762 3.71E-05 ntc FBtr0073185 3803830 3803958 3L - 3803858 3803899 5'utr ntc FlyBase G34155.1 TTATTAAGTGGTGCATAAAGATTCTCGGGAATCATTGTATGT 5 3803878 0.908524541 2 5 45 1 0.698970004 0 0 0 5 0 0 5 3L:3803858-3803899 6 ntc FBtr0073185 3803830 3803958 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3L - 3803866 3803899 5'utr ntc FlyBase G25834.1 TTATTAAGTGGTGCATAAAGATTCTCGGGAATCA 5 3803891 0.785204915 2 5 35 1 0.954242509 0 0.4 0.666666667 5 0 0 9 3L:3803866-3803899 6 5 2618 FBgn0035461 62.16 4.68 6.936666667 0.08043758 1.068376068 0.720807304 -13 0 -6.5 0.1 dme-miR-304-5p 8mer-A1 TGAGATTA 3L 3813693 3813700 + 3L_3813693_3813700_+ 0.625363336 0.625363349 0.625363343 0 CG12006 FBtr0073150|FBtr0073149 3813623|3813623 3813958|3813958 3L + 3813605 3813717 stop_codon CG12006 FlyBase G27872.1 ACGAGAATCTGTTCAATTAGATAATAGAGAAAATAAGAGAACCCACCACCGACGCCCTCCGTTCAAAAGCAAGAAGCAATGACACATTTGAGATTAACTAATAGATACAAACC 53 3813692 0.999859162 8 51 308 0.970149254 1.812913357 0.059701493 0.226415094 0.388059701 53 2 0 65 3L:3813605-3813717 8 CG12006 FBtr0073149|FBtr0073150 3813623|3813623 3813958|3813958 TGAGATTA 8mer-A1 dme-miR-304-5p 3L + 3813564 3813704 stop_codon CG12006 FlyBase G21121.1 CGATCATCCGCCGCTGGAGGATCTCGTCCTGGCCAACGAGAACGAGAATCTGTTCAATTAGATAATAGAGAAAATAAGAGAACCCACCACCGACGCCCTCCGTTCAAAAGCAAGAAGCAATGACACATTTGAGATTAACTA 25 3813692 0.974048468 8 22 122 0.875 1.06694679 0.1 0.48 0.675 25 3 2 35 3L:3813564-3813704 8 27 2619 FBgn0035464 622.06 34.45666667 52.80333333 0.043404173 0.783592919 0.511331355 1 1 1 0.1 dme-bantam-3p 6mer2-7 GATCTC 3L 3813928 3813933 + 3L_3813928_3813933_+ 0.999999575 0.999997848 0.999998712 1.27E-06 CG12006 FBtr0073150|FBtr0073149 3813623|3813623 3813958|3813958 3L + 3813906 3813951 3'utr CG12006 FlyBase G27874.1 ACTTGATCTGTCCTTTCTTTAAGATCTCGAAATAAAGGTTCAGTGG 15 3813924 0.981148013 4 14 134 0.894736842 0.753327667 0.052631579 0.133333333 0.315789474 15 0 2 17 3L:3813906-3813951 6 CG12006 FBtr0073149|FBtr0073150 3813623|3813623 3813958|3813958 GATCTC 6mer2-7 dme-bantam-3p 3L + 3813913 3813938 3'utr CG12006 FlyBase G21124.1 CTGTCCTTTCTTTAAGATCTCGAAAT 12 3813924 0.699683245 4 12 96 1 1.255272505 0 0.333333333 0.555555556 12 0 0 18 3L:3813913-3813938 6 13.5 2620 FBgn0035464 622.06 34.45666667 52.80333333 0.021702087 0.391796459 0.255665678 4 4 4 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA 3L 3818062 3818067 + 3L_3818062_3818067_+ 0.931310304 0.878316919 0.904813611 0.037471992 Scsalpha FBtr0073151 3817998 3818383 3L + 3817910 3818237 stop_codon Scsalpha FlyBase G27883.2 CTGGAGAAGGCCGGCGTCATTGTGACCAGGAGTCCTGCCAAAATGGGCCACGAGCTCTTCAAGGAGATGAAGCGTCTGGAGTTAGTGTAAATAATTAAAGGCCATAACCAAACCGGAATCCGTACGCCGATCAAAGCGTATACGCAAACTCATGATGATGAACCTAACGTTAAGCTAAAAGTGTCGAAAATCGAAATTGCATTCGAGCGAACCCAAATAAATTATTGTGAAAAATTACTAGAGAGAAACGAGAGGCGTTGAATTGTGACATGTATTCCAAGAATTAAGTTAACTACTGCCGTACCACCAAGTTGAACTAAAATAACTC 108 3818062 0.95825696 29 102 487 0.938461538 1.484299839 0.146153846 0.166666667 0.307692308 108 5 3 122 3L:3817910-3818237 6 Scsalpha FBtr0303096|FBtr0073151 3817998|3817998 3818154|3818383 TGATGA 6mer3-8 dme-miR-2a-2-5p 3L + 3818034 3818102 3'utr Scsalpha FlyBase G21130.1 CGCCGATCAAAGCGTATACGCAAACTCATGATGATGAACCTAACGTTAAGCTAAAAGTGTCGAAAATCG 23 3818062 0.953537633 6 22 108 1 1.51851394 0.151515152 0.304347826 0.515151515 23 0 0 33 3L:3818034-3818102 6 22 2621 FBgn0004888 1159.643333 96.01 147.01 0.01897135 0.229142798 0.149649684 0 0 0 0.1 dme-miR-1006-3p 6mer3-8 CGAATT 3L 3818340 3818345 + 3L_3818340_3818345_+ 0.507135712 0.507104228 0.50711997 2.23E-05 Scsalpha FBtr0073151 3817998 3818383 3L + 3818324 3818374 3'utr Scsalpha FlyBase G27884.1 GCTCGAATTATCAATGCGAATTGTATCTGAATGTGTAATAAATATGCATAA 21 3818345 0.786049582 3 20 156 0.962962963 1.414973348 0.296296296 0.285714286 0.444444444 21 1 0 26 3L:3818324-3818374 6 Scsalpha FBtr0073151 3817998 3818383 CGAATT 6mer3-8 dme-miR-1006-3p 3L + 3818328 3818358 3'utr Scsalpha FlyBase G21132.1 GAATTATCAATGCGAATTGTATCTGAATGTG 16 3818345 0.688206199 4 13 108 0.916666667 0.865301426 0.666666667 0.4375 0.625 16 0 2 22 3L:3818328-3818358 6 17 2622 FBgn0004888 1159.643333 96.01 147.01 0.01465968 0.177064889 0.115638392 -5 -5 -5 0.1 dme-miR-283-5p 6mer3-8 TGATAT 3L 3936739 3936744 - 3L_3936739_3936744_- 0.631399119 0.772932245 0.702165682 0.100079015 CG10866 FBtr0073173|FBtr0345342 3936595|3936058 3937012|3937012 3L - 3936720 3936776 3'utr CG10866 FlyBase G34186.2 TCTAACTAGAATACAGATAATATCCGGATATGTGATATGTAGTCCTTAGACAAACTA 89 3936748 0.988611041 10 80 766 0.91588785 1.991226076 0.065420561 0.157303371 0.299065421 89 9 0 98 3L:3936720-3936776 6 CG10866 FBtr0345342|FBtr0073173 3936058|3936595 3937012|3937012 TGATAT 6mer3-8 dme-miR-283-5p 3L - 3936655 3936770 3'utr CG10866 FlyBase G25860.1 TAGAATACAGATAATATCCGGATATGTGATATGTAGTCCTTAGACAAACTAGAGTAACGAGCATAGCGCACAACGATATCTAATCGATTTTCAACTTCAACTCTGACTCTTGTAAC 74 3936739 0.985422993 15 68 564 0.896551724 1.716003344 0.103448276 0.391891892 0.612068966 74 11 1 104 3L:3936655-3936770 6 75 2623 FBgn0035475 72.03666667 6.396666667 9.86 1.041136458 11.7248567 7.606490872 4 -5 -0.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 3936987 3936993 - 3L_3936987_3936993_- 0.69332327 0.707899022 0.700611146 0.010306576 CG10866 FBtr0073173|FBtr0073173|FBtr0073173|FBtr0345342|FBtr0345342|FBtr0345342 3936595|3936595|3936595|3936058|3936058|3936058 3937012|3937012|3937012|3937012|3937012|3937012 3L - 3936808 3937030 stop_codon CG10866 FlyBase G34187.1 CGCTACATGCAGGTCTAGGCTATATGTAGGAACACTTTGTGATAATATTGCAAAACATCATCAAATGGTAAATGCAAATTGCTTTTCAAGCTTCAAGCGCTTTAAGATTAGAGATCGCCTAGAAACCCAAATACTTCCTCGCAACAGGACACAATTTTACACGGATCTACTACTAGAAGTACCTTTTTGAGGGAACTATGCTTCCCGTCCAATTGATTTTTCT 422 3936994 0.809104586 37 401 3114 0.950664137 1.62065648 0.168880455 0.201421801 0.360531309 422 15 11 501 3L:3936808-3937030 7 CG10866 FBtr0345342|FBtr0345342|FBtr0345342|FBtr0073173|FBtr0073173|FBtr0073173 3936058|3936058|3936058|3936595|3936595|3936595 3937012|3937012|3937012|3937012|3937012|3937012 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 3936878 3937031 stop_codon CG10866 FlyBase G25861.2 TCGCTACATGCAGGTCTAGGCTATATGTAGGAACACTTTGTGATAATATTGCAAAACATCATCAAATGGTAAATGCAAATTGCTTTTCAAGCTTCAAGCGCTTTAAGATTAGAGATCGCCTAGAAACCCAAATACTTCCTCGCAACAGGACACA 216 3936994 0.802454071 20 198 1548 0.922330097 1.278753601 0.174757282 0.347222222 0.54368932 216 10 14 285 3L:3936878-3937031 7 194.5 2624 FBgn0035475 72.03666667 6.396666667 9.86 2.700013882 30.4064617 19.72616633 1 1 1 0.1 dme-miR-283-5p 8mer-A1 TGATATTA 3L 4037648 4037655 - 3L_4037648_4037655_- 0.592176247 0.592173662 0.592174955 1.77E-06 CG11593 FBtr0114509|FBtr0332982 4037521|4037521 4038458|4038458 3L - 4037624 4037878 3'utr CG11593 FlyBase G34193.2 CGCATATTGTATATTCCAAGCGTTCCAAACACGACACTTTCGCTGACACATGATGGACCCCATGCCAGTCGACAGTAGGTGCCCCATTTATCTCATCCACCATCAGAGTTAGCCGATTAGCCTGTAAGTGAAATAGCGACCATTCTTTGTGGAATCTACACACGGACACACGTAGAATCTCTCTAGCGGATAATGTGACGTACAATTAGGCAATGTAACCGATTGATATTAAGAGCGACATTTTGTTGGTTTCCT 149 4037656 0.920366462 31 147 846 0.983870968 2.26245109 0.166666667 0.194630872 0.35483871 149 3 0 183 3L:4037624-4037878 8 CG11593 FBtr0332982|FBtr0114509 4037521|4037521 4038458|4038458 TGATATTA 8mer-A1 dme-miR-283-5p 3L - 4037612 4037746 3'utr CG11593 FlyBase G25865.1 ATAGCGACCATTCTTTGTGGAATCTACACACGGACACACGTAGAATCTCTCTAGCGGATAATGTGACGTACAATTAGGCAATGTAACCGATTGATATTAAGAGCGACATTTTGTTGGTTTCCTTTTACCGCTTTA 90 4037656 0.970502511 14 86 495 0.948148148 2.10720997 0.118518519 0.388888889 0.592592593 90 7 0 128 3L:4037612-4037746 8 55 2625 FBgn0035488 490 23.04 35.21 0.112244898 2.387152778 1.562056234 1 1 1 0.1 dme-bantam-3p 7mer-A1 GATCTCA 3L 4038288 4038294 - 3L_4038288_4038294_- 0.816078438 0.820177 0.818127719 0.002898148 CG11593 FBtr0114509|FBtr0332982 4037521|4037521 4038458|4038458 3L - 4038211 4038392 3'utr CG11593 FlyBase G34196.1 ACTCGCTACTCGAGCCTCTGCATTCCCCATCTTCAATAAGGACTGAGGCTAATCCTCCAAACCGATCGTTTGCGCTCTCTCGCTATGCTTTAATTTAAGATCTCAATCTTTGTGATACTTTATTTTTGCCTTCTCTCAGCCAAGTCGAAATCCCCCCCAGCATTTTTCTGTGTGAAGCGTGA 190 4038301 0.987340644 28 178 1597 0.937219731 1.278753601 0.295964126 0.152631579 0.278026906 190 4 10 209 3L:4038211-4038392 7 CG11593 FBtr0332982|FBtr0114509 4037521|4037521 4038458|4038458 GATCTCA 7mer-A1 dme-bantam-3p 3L - 4038231 4038417 3'utr CG11593 FlyBase G25868.1 TGCAAACTTAACGCATTCATGCCACACTCGCTACTCGAGCCTCTGCATTCCCCATCTTCAATAAGGACTGAGGCTAATCCTCCAAACCGATCGTTTGCGCTCTCTCGCTATGCTTTAATTTAAGATCTCAATCTTTGTGATACTTTATTTTTGCCTTCTCTCAGCCAAGTCGAAATCCCCCCCAGCA 108 4038299 0.984197876 30 103 906 0.961783439 2.178976947 0.324840764 0.342592593 0.547770701 108 6 0 151 3L:4038231-4038417 7 80.5 2626 FBgn0035488 490 23.04 35.21 0.164285714 3.493923611 2.286282306 7 5 6 0.1 dme-miR-33-5p 7mer-A1 AATGCAA 3L 4094424 4094430 - 3L_4094424_4094430_- 0.740519886 0.646870953 0.693695419 0.066219772 CG14995 FBtr0073272|FBtr0073271|FBtr0310630|FBtr0073273|FBtr0302304|FBtr0300877 4094341|4094341|4094341|4094341|4094341|4094341 4095008|4095008|4095008|4095008|4095008|4097425 3L - 4094398 4094473 3'utr CG14995 FlyBase G34204.1 AAAGCAAATAACGCTAAACCTTAATTTTAATATATTTACCTAAAATGCAATGAACACGTCCAGTTTATGTTTGCCG 8 4094423 0.977098458 5 7 56 0.888888889 0.602059991 0 0.125 0.222222222 8 0 1 8 3L:4094398-4094473 7 CG14995 FBtr0073272|FBtr0310630|FBtr0302304|FBtr0073271|FBtr0073273|FBtr0300877 4094341|4094341|4094341|4094341|4094341|4094341 4095008|4095008|4095008|4095008|4095008|4097425 AATGCAA 7mer-A1 dme-miR-33-5p 3L - 4094406 4094445 3'utr CG14995 FlyBase G25875.1 AATATATTTACCTAAAATGCAATGAACACGTCCAGTTTAT 9 4094424 0.95768435 4 8 43 0.923076923 1.079181246 0.384615385 0.222222222 0.461538462 9 1 0 12 3L:4094406-4094445 7 7.5 2627 FBgn0035497 401.3666667 15.55333333 23.84 0.018686156 0.482211745 0.314597315 -7 -6 -6.5 0.1 dme-miR-305-5p 7mer-m1 GTACAAT 3L 4113940 4113946 + 3L_4113940_4113946_+ 0.765586643 0.765586507 0.765586575 7.07E-08 Ack FBtr0073211 4113786 4114157 3L + 4113723 4113966 stop_codon Ack FlyBase G27961.1 AGGCGCTGCAGCAGACCAACTGGAGCTTAGAGGTGGCAGCTGAACTACTACTGAATGCCGGCTAAACCCACAAACTACAACCATGTATTACCGCCTCGAATGTAATTGCTTTAGTTTTACGTGCTGAATATTCTTTTAAACTTAGCTAACGATGTATCGAATCTTTATCAAAATACTCCTAGGTGAATGCGCGAATGCAAACACATTGTCAACGACTGTACAATTTGTTCTATTTAATGTAAGC 153 4113946 0.942671385 32 146 880 0.956989247 1.773298748 0.290322581 0.189542484 0.333333333 153 6 2 178 3L:4113723-4113966 7 Ack FBtr0073211 4113786 4114157 GTACAAT 7mer-m1 dme-miR-305-5p 3L + 4113810 4113958 3'utr Ack FlyBase G21181.1 TTACCGCCTCGAATGTAATTGCTTTAGTTTTACGTGCTGAATATTCTTTTAAACTTAGCTAACGATGTATCGAATCTTTATCAAAATACTCCTAGGTGAATGCGCGAATGCAAACACATTGTCAACGACTGTACAATTTGTTCTATTTA 95 4113946 0.842325462 21 89 603 0.957746479 1.832508913 0.352112676 0.4 0.598591549 95 5 1 136 3L:4113810-4113958 7 67 2628 FBgn0028484 434.37 11.81666667 17.96333333 0.15424638 5.669957687 3.729820004 -6 -6 -6 0.1 dme-bantam-3p 6mer3-8 TGATCT 3L 4114338 4114343 - 3L_4114338_4114343_- 0.999999984 0.999999998 0.999999991 0 Chd64 FBtr0073270|FBtr0310531 4114287|4114287 4114971|4114971 3L - 4114273 4114364 3'utr Chd64 FlyBase G34209.1 TACGTGTTACACACTTTTGAATGATCTATTTTAAATAATGTCCCCTGTTGAAAATAAATAATTATTCTTTTAACACATATTGCTTGTATCTT 44 4114343 0.992255081 11 42 476 0.961538462 1.698970004 0.057692308 0.136363636 0.269230769 44 2 0 50 3L:4114273-4114364 6 Chd64 FBtr0310531|FBtr0073270 4114287|4114287 4114971|4114971 TGATCT 6mer3-8 dme-bantam-3p 3L - 4114292 4114357 3'utr Chd64 FlyBase G25878.1 TACACACTTTTGAATGATCTATTTTAAATAATGTCCCCTGTTGAAAATAAATAATTATTCTTTTAA 25 4114344 0.992395246 8 24 264 0.973684211 1.568201724 0.157894737 0.4 0.605263158 25 1 0 37 3L:4114292-4114357 6 30 2629 FBgn0035499 3483.076667 314.5766667 480.2833333 0.008613075 0.095366259 0.062463129 0 1 0.5 0.1 dme-miR-980-5p 6mer2-7 AAAAAC 3L 4114416 4114421 - 3L_4114416_4114421_- 0.966703058 0.999992655 0.983347857 0.023539302 Chd64 FBtr0073270|FBtr0310531 4114287|4114287 4114971|4114971 3L - 4114409 4114499 3'utr Chd64 FlyBase G34210.1 GTGTTTGATGAATGTGTCTTCTATCTCGTAGAGTAACGATTACAATGTTGTTTCGAACTAACCACCTGAATACCAATCAAAAACGCAGAGC 13 4114441 0.978866028 9 12 79 0.923076923 1.079181246 0.153846154 0 0 13 1 0 12 3L:4114409-4114499 6 Chd64 FBtr0310531|FBtr0073270 4114287|4114287 4114971|4114971 AAAAAC 6mer2-7 dme-miR-980-5p 3L - 4114380 4114486 3'utr Chd64 FlyBase G25879.1 GTGTCTTCTATCTCGTAGAGTAACGATTACAATGTTGTTTCGAACTAACCACCTGAATACCAATCAAAAACGCAGAGCATTTACAATAATGTATTTACAGGCAGAGC 12 4114441 0.970371437 9 12 70 1 1.204119983 0.125 0.25 0.4375 12 0 0 16 3L:4114380-4114486 6 2.5 2630 FBgn0035499 3483.076667 314.5766667 480.2833333 0.000717756 0.007947188 0.005205261 20 20 20 0.1 dme-miR-970-3p 6mer2-7 CTTATG 3L 4123713 4123718 - 3L_4123713_4123718_- 0.999987439 0.999999855 0.999993647 8.84E-06 ens FBtr0073267|FBtr0310636|FBtr0310634|FBtr0310637|FBtr0073268|FBtr0310635|FBtr0073265|FBtr0073266|FBtr0345589|FBtr0310633|FBtr0113135|FBtr0073269 4123551|4123551|4123551|4123551|4123551|4123551|4123551|4123551|4122905|4123551|4123551|4123136 4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835 3L - 4123652 4123792 3'utr ens FlyBase G34224.1 ATGCCTAGGTCTAGTGGAACTGGTAGTTCTACCATGTTGTACTATTTGTAGTAGGAGTCCCAAATCTGATTATGCTTATGTCACCCTTTATTATAGGAATGTTCTCTGTATATTATTGCGTCTCTTTTGCGTCTACGTATA 48 4123723 0.843640985 18 40 423 0.844827586 1.088136089 0.120689655 0.145833333 0.293103448 48 6 3 49 3L:4123652-4123792 6 ens FBtr0113135|FBtr0073269|FBtr0073265|FBtr0073266|FBtr0345589|FBtr0310633|FBtr0073268|FBtr0310636|FBtr0310635|FBtr0310637|FBtr0073267|FBtr0310634 4123551|4123136|4123551|4123551|4122905|4123551|4123551|4123551|4123551|4123551|4123551|4123551 4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835 CTTATG 6mer2-7 dme-miR-970-3p 3L - 4123710 4123786 3'utr ens FlyBase G25895.1 AGGTCTAGTGGAACTGGTAGTTCTACCATGTTGTACTATTTGTAGTAGGAGTCCCAAATCTGATTATGCTTATGTCA 21 4123724 0.741884886 9 17 137 0.774193548 0.903089987 0.032258065 0.238095238 0.483870968 21 5 2 24 3L:4123710-4123786 6 12 2631 FBgn0264693 3883.083333 100.8 155.21 0.003090328 0.119047619 0.077314606 5 6 5.5 0.1 dme-miR-33-5p 8mer-A1 CAATGCAA 3L 4140749 4140756 + 3L_4140749_4140756_+ 0.634489108 0.634552153 0.634520631 4.46E-05 Ras64B FBtr0073212 4140459 4141398 3L + 4140714 4140823 3'utr Ras64B FlyBase G27969.1 AAATAGCTACGAAGAATCTTACAACTGACAACTAACAATGCAAAATGCAAACAGAAACACGAAACATAGGTAGATATATACAACAGATTCACACGAATAACTTATATATA 48 4140746 0.940494905 9 44 177 0.9 1.73239376 0.35 0.208333333 0.366666667 48 6 0 54 3L:4140714-4140823 8 Ras64B FBtr0073212 4140459 4141398 CAATGCAA 8mer-A1 dme-miR-33-5p 3L + 4140694 4140766 3'utr Ras64B FlyBase G21184.1 GAATAAACTTCGCCACTCTCAAATAGCTACGAAGAATCTTACAACTGACAACTAACAATGCAAAATGCAAACA 30 4140746 0.850917177 9 28 111 0.955555556 1.633468456 0.488888889 0.333333333 0.555555556 30 2 0 43 3L:4140694-4140766 8 28.5 2632 FBgn0003206 861.7733333 65.11666667 99.82666667 0.033071341 0.437675966 0.285494858 3 3 3 0.1 dme-miR-318-3p 6mer3-8 CCCAGT 3L 4141209 4141214 + 3L_4141209_4141214_+ 0.999999999 0.999768688 0.999884344 0.000163554 Ras64B FBtr0073212 4140459 4141398 3L + 4141186 4141253 3'utr Ras64B FlyBase G27971.1 TTAACGATACTTTTGTACATGTCCCCAGTCGGATCCGGATCCTATGGTTTATTGTTCGCCAAATGTAT 8 4141199 0.987090434 6 7 59 0.888888889 0.903089987 0.333333333 0.125 0.222222222 8 1 0 8 3L:4141186-4141253 6 Ras64B FBtr0073212 4140459 4141398 CCCAGT 6mer3-8 dme-miR-318-3p 3L + 4141191 4141223 3'utr Ras64B FlyBase G21185.1 GATACTTTTGTACATGTCCCCAGTCGGATCCGG 6 4141205 0.994872032 2 3 27 0.636363636 0.84509804 0.272727273 0.666666667 0.818181818 6 4 0 7 3L:4141191-4141223 6 5.5 2633 FBgn0003206 861.7733333 65.11666667 99.82666667 0.006382189 0.084463783 0.055095499 10 4 7 0.1 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 4173445 4173451 + 3L_4173445_4173451_+ 0.823349404 0.823349469 0.823349437 7.07E-08 Ero1L FBtr0073217 4173388 4173789 3L + 4173356 4173623 stop_codon Ero1L FlyBase G27974.1 CGAGATGGAGAATTTCCGGTGCGTGCTGAGGTAACCCATCCAGACTGGACTAACCGAGCGACGAGCCGGATCTCATTCGCCTCACATGAGCAGCTAGTTAATTCATACGCACATCGCTGGGGCTGCGTCTTGGACTTCCTACTGAATGCGGTTTCCCTCCCATAGTTCGTAACATTTTTGAGGCCAGAGGCTAGTAACCCCAGGATAGCTGCTTCCCTGTACATACAAACTATTACCCTAGGCTACTTGTACTTTAGCGCACCGTATC 507 4173442 0.949795386 31 498 3210 0.985148515 2.298853076 0.072607261 0.151873767 0.290429043 507 7 2 597 3L:4173356-4173623 7 Ero1L FBtr0073217 4173388 4173789 GCAGCTA 7mer-A1 dme-miR-980-3p 3L + 4173339 4173629 stop_codon Ero1L FlyBase G21189.1 CTATCCAACAGTATATACGAGATGGAGAATTTCCGGTGCGTGCTGAGGTAACCCATCCAGACTGGACTAACCGAGCGACGAGCCGGATCTCATTCGCCTCACATGAGCAGCTAGTTAATTCATACGCACATCGCTGGGGCTGCGTCTTGGACTTCCTACTGAATGCGGTTTCCCTCCCATAGTTCGTAACATTTTTGAGGCCAGAGGCTAGTAACCCCAGGATAGCTGCTTCCCTGTACATACAAACTATTACCCTAGGCTACTTGTACTTTAGCGCACCGTATCACCCTA 405 4173442 0.973535837 34 392 2374 0.975409836 2.172456974 0.091803279 0.377777778 0.586885246 405 12 3 595 3L:4173339-4173629 7 163 2634 FBgn0261274 553.5433333 32.04333333 49.15666667 0.294466558 5.086861542 3.315928663 3 3 3 0.1 dme-miR-8-3p 7mer-A1 AGTATTA 3L 4223420 4223426 + 3L_4223420_4223426_+ 0.760841391 0.747706136 0.754273763 0.00928806 CG43367 FBtr0307311|FBtr0307309|FBtr0307312|FBtr0307310 4222591|4222591|4222591|4222591 4224003|4224003|4224003|4224003 3L + 4223397 4223473 3'utr CG43367 FlyBase G27991.1 ATTAACAGAGCATTTCCAATTGAAGTATTATCACCACAGCACGATCACAGTCCGTCCACACAGATCCGAGATCCGCA 45 4223416 0.921664097 5 42 291 0.93877551 1.361727836 0.163265306 0.088888889 0.163265306 45 2 1 46 3L:4223397-4223473 7 CG43367 FBtr0307310|FBtr0307312|FBtr0307309|FBtr0307311 4222591|4222591|4222591|4222591 4224003|4224003|4224003|4224003 AGTATTA 7mer-A1 dme-miR-8-3p 3L + 4223399 4223467 3'utr CG43367 FlyBase G21201.1 TAACAGAGCATTTCCAATTGAAGTATTATCACCACAGCACGATCACAGTCCGTCCACACAGATCCGAGA 16 4223416 0.831134552 4 12 91 0.782608696 1.255272505 0.217391304 0.25 0.47826087 16 5 0 18 3L:4223399-4223467 7 22.5 2635 FBgn0263110 1107.403333 13.19666667 20.14666667 0.020317801 1.704976004 1.11681006 4 4 4 0.1 dme-miR-932-5p 6mer3-8 GGAATT 3L 4245849 4245854 + 3L_4245849_4245854_+ 0.999991801 0.997995903 0.998993852 0.001411314 pav FBtr0073227 4245833 4246233 3L + 4245821 4245978 stop_codon pav FlyBase G28008.1 AGTCGAAAATCTAAAAATGACTCAGCGTGGAATTCTCAAAGTCAATTACCCATTTAGTTCATAGTTACTTAGTTTCCATAACTTAAATTTAAGTTTATTACTCACCCACTTCGGTTTTTGGAGTTGAATCGCATTGAAGTGATTTGTTTGATTAAAGA 54 4245853 0.970816333 21 51 408 0.953125 1.30820858 0.28125 0.148148148 0.28125 54 1 2 61 3L:4245821-4245978 6 pav FBtr0073227 4245833 4246233 GGAATT 6mer3-8 dme-miR-932-5p 3L + 4245839 4245870 3'utr pav FlyBase G21213.1 GACTCAGCGTGGAATTCTCAAAGTCAATTACC 5 4245853 0.98212979 3 3 17 0.833333333 0.698970004 0.5 0.2 0.333333333 5 1 0 5 3L:4245839-4245870 6 12 2636 FBgn0011692 1162 44.12333333 67.86333333 0.010327022 0.271964947 0.176825974 -4 -4 -4 0.1 dme-miR-14-3p 7mer-A1 AGACTGA 3L 4246452 4246458 - 3L_4246452_4246458_- 0.823349562 0.823349562 0.823349562 0 ago FBtr0073247|FBtr0073246|FBtr0073245 4246341|4246341|4246341 4247475|4247475|4247475 3L - 4246433 4246478 3'utr ago FlyBase G34293.1 CGAACATATATTTTAATTATAGACTGATTTATTAGTAATTGAAATT 138 4246461 0.629084531 14 130 1594 0.946428571 1.72427587 0.029761905 0.18115942 0.327380952 138 7 2 159 3L:4246433-4246478 7 ago FBtr0073246|FBtr0073245|FBtr0073247 4246341|4246341|4246341 4247475|4247475|4247475 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 4246425 4246490 3'utr ago FlyBase G25945.1 GAAATCATTAAGCGAACATATATTTTAATTATAGACTGATTTATTAGTAATTGAAATTAATCTACA 117 4246462 0.992941524 15 109 1278 0.942307692 1.866287339 0.038461538 0.256410256 0.442307692 117 8 1 147 3L:4246425-4246490 7 125 2637 FBgn0041171 1117.28 25.37333333 39.01 0.111878849 4.92643195 3.204306588 3 4 3.5 0.1 dme-miR-1008-3p 7mer-A1 GCTGTGA 3L 4247144 4247150 - 3L_4247144_4247150_- 0.716364854 0.744169613 0.730267233 0.019660892 ago FBtr0073247|FBtr0073246|FBtr0073245 4246341|4246341|4246341 4247475|4247475|4247475 3L - 4247115 4247181 3'utr ago FlyBase G34296.1 AGGGTAGTCGGGTGGTCGGGGTGTGGCTGTGGCTGTGAGTGTATATTGTTAATAATACCCTTTTAAA 40 4247152 0.984785573 7 39 315 0.975609756 1.301029996 0.414634146 0.025 0.048780488 40 0 1 40 3L:4247115-4247181 7 ago FBtr0073246|FBtr0073245|FBtr0073247 4246341|4246341|4246341 4247475|4247475|4247475 GCTGTGA 7mer-A1 dme-miR-1008-3p 3L - 4247115 4247181 3'utr ago FlyBase G25950.1 AGGGTAGTCGGGTGGTCGGGGTGTGGCTGTGGCTGTGAGTGTATATTGTTAATAATACCCTTTTAAA 42 4247152 0.979895396 7 42 308 1 1.755874856 0.666666667 0.285714286 0.473684211 42 0 0 57 3L:4247115-4247181 7 38.5 2638 FBgn0041171 1117.28 25.37333333 39.01 0.034458685 1.51734104 0.986926429 2 2 2 0.1 dme-miR-304-5p 6mer2-7 GAGATT 3L 4247371 4247376 - 3L_4247371_4247376_- 0.992620161 0.994951174 0.993785668 0.001648266 ago FBtr0073247|FBtr0073246|FBtr0073245 4246341|4246341|4246341 4247475|4247475|4247475 3L - 4247343 4247423 3'utr ago FlyBase G34297.1 AGGCGGTGAACGGTCAGGGACGGGGCAGCTAGTATACAGCTTCAAGCGAGATTTCATTGCAAACTCATCCAAACACAGAAA 93 4247372 0.969633283 8 90 612 0.961538462 2 0.048076923 0.096774194 0.192307692 93 4 0 100 3L:4247343-4247423 6 ago FBtr0073246|FBtr0073245|FBtr0073247 4246341|4246341|4246341 4247475|4247475|4247475 GAGATT 6mer2-7 dme-miR-304-5p 3L - 4247345 4247425 3'utr ago FlyBase G25952.1 TCAGGCGGTGAACGGTCAGGGACGGGGCAGCTAGTATACAGCTTCAAGCGAGATTTCATTGCAAACTCATCCAAACACAGA 68 4247372 0.911390196 8 60 415 0.921568627 1.672097858 0.049019608 0.352941176 0.568627451 68 7 1 94 3L:4247345-4247425 6 68 2639 FBgn0041171 1117.28 25.37333333 39.01 0.060862094 2.679978981 1.743142784 -4 -4 -4 0.1 dme-miR-7-5p 6mer3-8 GTCTTC 3L 4261591 4261596 + 3L_4261591_4261596_+ 0.999999758 0.999984958 0.999992358 1.05E-05 CG1309 FBtr0073229 4261471 4261643 3L + 4261525 4261614 3'utr CG1309 FlyBase G28023.1 TTTAGTAATTTTTGCCTTCTGACTGCTTATTAAATTATTCTAACTGGGAACAGCCGGGTAGCTGGTGTCTTCTGAACTGGTGTGAAATTA 32 4261604 0.883857053 15 32 298 1 1.556302501 0.194444444 0.09375 0.194444444 32 0 0 36 3L:4261525-4261614 6 CG1309 FBtr0073229 4261471 4261643 GTCTTC 6mer3-8 dme-miR-7-5p 3L + 4261569 4261613 3'utr CG1309 FlyBase G21222.1 TGGGAACAGCCGGGTAGCTGGTGTCTTCTGAACTGGTGTGAAATT 13 4261604 0.983827713 7 13 109 1 1.176091259 0.333333333 0.153846154 0.266666667 13 0 0 15 3L:4261569-4261613 6 11 2640 FBgn0035519 279.17 18.09 27.51666667 0.039402515 0.608070757 0.399757723 -13 -13 -13 0.1 dme-miR-79-3p 6mer2-7 AGCTTT 3L 4291475 4291480 - 3L_4291475_4291480_- 0.905793376 0.890868392 0.898330884 0.010553569 CG15012 FBtr0300776 4291206 4291513 3L - 4291407 4291510 3'utr CG15012 FlyBase G34336.1 TTCCATTCAAATTATTGCACAAGGGAACGCAGCTTTTAGTATCTAGACTCATTACGTACATAATCAGGAGTCCAAGGAGTTTATGCTTGAGGCCGAGGACACCA 63 4291475 0.973808782 11 60 372 0.96 1.857332496 0.133333333 0.174603175 0.306666667 63 3 0 72 3L:4291407-4291510 6 CG15012 FBtr0300776 4291206 4291513 AGCTTT 6mer2-7 dme-miR-79-3p 3L - 4291404 4291502 3'utr CG15012 FlyBase G25978.1 AAATTATTGCACAAGGGAACGCAGCTTTTAGTATCTAGACTCATTACGTACATAATCAGGAGTCCAAGGAGTTTATGCTTGAGGCCGAGGACACCATCA 41 4291476 0.972817375 12 39 234 0.970588235 1.819543936 0.073529412 0.463414634 0.676470588 41 2 0 66 3L:4291404-4291502 6 38 2641 FBgn0035528 717.9933333 105.47 160.88 0.052925283 0.360292026 0.236200895 -5 -4 -4.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3L 4320958 4320965 + 3L_4320958_4320965_+ 0.631132075 0.631126846 0.631129461 3.75E-06 CG32250 FBtr0073287|FBtr0306092 4320948|4320948 4321109|4321109 3L + 4320907 4320981 stop_codon CG32250 FlyBase G28064.1 AAAGATAGCCGGCACCGTTGGCATGCTGCTTAAGCGCAACTGAAAAGAGGCTCTAGTCAACAAGTAGTTTTACTC 52 4320960 0.921412227 9 52 204 1 1.785329835 0.131147541 0.115384615 0.245901639 52 0 0 61 3L:4320907-4320981 8 CG32250 FBtr0306092|FBtr0073287 4320948|4320948 4321109|4321109 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L + 4320909 4320981 stop_codon CG32250 FlyBase G21248.1 AGATAGCCGGCACCGTTGGCATGCTGCTTAAGCGCAACTGAAAAGAGGCTCTAGTCAACAAGTAGTTTTACTC 29 4320960 0.942728198 4 29 123 1 1.602059991 0.05 0.275862069 0.475 29 0 0 40 3L:4320909-4320981 8 35.5 2642 FBgn0052250 102.0233333 9.57 14.53333333 0.347959617 3.709508882 2.44266055 -2 -2 -2 0.1 dme-miR-970-3p 7mer-m8 TCTTATG 3L 4323787 4323793 - 3L_4323787_4323793_- 0.388898282 0.635204735 0.512051508 0.174164926 Cip4 FBtr0306533|FBtr0333570|FBtr0308202|FBtr0113138|FBtr0306095|FBtr0308201|FBtr0306096|FBtr0306534|FBtr0333571|FBtr0306094|FBtr0073339 4323528|4322489|4322670|4323528|4323528|4322670|4323528|4322489|4322489|4323528|4323528 4324056|4324056|4324056|4324056|4324056|4324056|4324056|4324056|4324056|4324056|4324056 3L - 4323767 4323816 3'utr Cip4 FlyBase G34348.1 ACTTTGATTTTAAACGTCATTGATCTTATGGTAGTGCAAGCTATATCATA 40 4323796 0.743846846 5 40 330 1 1.740362689 0.072727273 0.275 0.472727273 40 0 0 55 3L:4323767-4323816 7 Cip4 FBtr0306096|FBtr0333571|FBtr0306094|FBtr0306534|FBtr0073339|FBtr0333570|FBtr0306533|FBtr0113138|FBtr0308202|FBtr0306095|FBtr0308201 4323528|4322489|4323528|4322489|4323528|4322489|4323528|4323528|4322670|4323528|4322670 4324056|4324056|4324056|4324056|4324056|4324056|4324056|4324056|4324056|4324056|4324056 TCTTATG 7mer-m8 dme-miR-970-3p 3L - 4323774 4323816 3'utr Cip4 FlyBase G25981.1 ACTTTGATTTTAAACGTCATTGATCTTATGGTAGTGCAAGCTA 24 4323796 0.981525212 5 24 181 1 1.602059991 0.025 0.5 0.7 24 0 0 40 3L:4323774-4323816 7 32 2643 FBgn0035533 1378.006667 51.31333333 79.21666667 0.023221949 0.623619592 0.403955397 3 3 3 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 3L 434196 434201 - 3L_434196_434201_- 0.999997923 1 0.999998962 1.48E-06 klar FBtr0110818|FBtr0110818 434081|434081 435117|435117 3L - 434189 434282 3'utr klar FlyBase G33021.1 AAAATATCTCTTAGGTTCGTGTTTGGAATTCCTAGACTTAGTTTATGGTTTACTCACTCCTGGCAGATGATCATTGTAATATACTTATAAGGTT 32 434210 0.741794928 12 31 286 0.948717949 1.568201724 0.205128205 0.1875 0.333333333 32 2 0 37 3L:434189-434282 6 klar FBtr0110818|FBtr0110818 434081|434081 435117|435117 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 3L - 434190 434282 3'utr klar FlyBase G24986.1 AAAATATCTCTTAGGTTCGTGTTTGGAATTCCTAGACTTAGTTTATGGTTTACTCACTCCTGGCAGATGATCATTGTAATATACTTATAAGGT 29 434209 0.699419806 11 26 225 0.860465116 1.091080469 0.11627907 0.413793103 0.604651163 29 4 2 37 3L:434190-434282 6 8.5 2644 FBgn0001316 7969.913333 135.5066667 207.9333333 0.001066511 0.062727541 0.040878487 9 8 8.5 0.1 dme-miR-252-5p 8mer-m1 GTACTTAG 3L 434769 434776 - 3L_434769_434776_- 0.636778073 0.63677579 0.636776931 1.63E-06 klar FBtr0333851|FBtr0333850|FBtr0110818|FBtr0333852|FBtr0343527|FBtr0112807|FBtr0072565 434297|434297|434081|434297|434297|434297|434297 435117|435117|435117|435117|435117|435117|435117 3L - 434699 434801 3'utr klar FlyBase G33023.1 TGCTGTTCGATTGAACGCTGAATATGTACTTAGGCGAGGAGCAGACGATGCCCAGCCACGTGTAAACTGCCGCATAAAGGAACAAAGGGGCGGATCGTCCCCC 481 434777 0.969575209 10 472 2650 0.981916817 2.433769834 0.253164557 0.130977131 0.244122966 481 9 1 543 3L:434699-434801 8 klar FBtr0333852|FBtr0343527|FBtr0112807|FBtr0072565|FBtr0110818|FBtr0333851|FBtr0333850 434297|434297|434297|434297|434081|434297|434297 435117|435117|435117|435117|435117|435117|435117 GTACTTAG 8mer-m1 dme-miR-252-5p 3L - 434721 434801 3'utr klar FlyBase G24989.1 TGCTGTTCGATTGAACGCTGAATATGTACTTAGGCGAGGAGCAGACGATGCCCAGCCACGTGTAAACTGCCGCATAAAGGA 268 434777 0.77170677 7 264 1435 0.992822967 2.618048097 0.265550239 0.402985075 0.61722488 268 3 0 415 3L:434721-434801 8 366.5 2645 FBgn0001316 7969.913333 135.5066667 207.9333333 0.045985444 2.704663977 1.762584162 1 1 1 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 4403037 4403042 + 3L_4403037_4403042_+ 0.998400348 0.553316868 0.775858608 0.31472149 slow FBtr0073291|FBtr0073292 4402842|4402842 4403181|4403181 3L + 4402990 4403060 3'utr slow FlyBase G28068.1 CGGGCTATTAGTACTTAAGCGAGAACGTGTGTCATAAATGTATCGAGATGTGAAGTTTTAGACGTAAGCGC 7 4403046 0.984441365 4 7 51 1 0.903089987 0.375 0.142857143 0.25 7 0 0 8 3L:4402990-4403060 6 slow FBtr0073291|FBtr0073292 4402842|4402842 4403181|4403181 ATGTGA 6mer3-8 dme-miR-1003-3p 3L + 4402990 4403063 3'utr slow FlyBase G21250.1 CGGGCTATTAGTACTTAAGCGAGAACGTGTGTCATAAATGTATCGAGATGTGAAGTTTTAGACGTAAGCGCACC 7 4403046 0.960993693 4 7 36 1 0.954242509 0.333333333 0.285714286 0.444444444 7 0 0 9 3L:4402990-4403063 6 4.5 2646 FBgn0035539 0.666666667 0.043333333 0.066666667 6.75 103.8461538 67.5 -9 -9 -9 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3L 4405020 4405026 + 3L_4405020_4405026_+ 0.521223854 0.521223854 0.521223854 0 Syx17 FBtr0073293 4404847 4405168 3L + 4405001 4405037 3'utr Syx17 FlyBase G28070.2 TAGTTCAATATCCCCATTTTGTGATTTTCCACGTGCA 120 4405019 0.602524336 9 113 1180 0.946745562 1.602059991 0.01183432 0.275 0.485207101 120 6 3 160 3L:4405001-4405037 7 Syx17 FBtr0073293 4404847 4405168 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 4404932 4405036 stop_codon Syx17 FlyBase G21253.1 AGCCACCAACGGAGTGATTTGCAGCGTGCGCAGCTATTGTTCCGTTCAGTAGAAATTTGACCACGATTTTAGTTCAATATCCCCATTTTGTGATTTTCCACGTGC 103 4405019 0.989410739 11 101 981 0.981012658 2.190331698 0.056962025 0.398058252 0.607594937 103 3 0 155 3L:4404932-4405036 7 100 2647 FBgn0035540 155.05 12.22333333 18.79666667 0.644953241 8.181074448 5.320092215 1 1 1 0.1 dme-miR-304-5p 6mer2-7 GAGATT 3L 4405293 4405298 - 3L_4405293_4405298_- 0.999999983 0.999999984 0.999999983 0 CG15019 FBtr0073335|FBtr0113139 4405212|4405125 4405360|4405360 3L - 4405263 4405309 3'utr CG15019 FlyBase G34354.1 GCTTAGTTTAGGAGATTTTGTAGGCTTTTTCTACAAAGATGTTATAG 11 4405281 0.989105411 6 11 103 1 1.113943352 0.384615385 0.181818182 0.307692308 11 0 0 13 3L:4405263-4405309 6 CG15019 FBtr0113139|FBtr0073335 4405125|4405212 4405360|4405360 GAGATT 6mer2-7 dme-miR-304-5p 3L - 4405272 4405321 3'utr CG15019 FlyBase G25984.1 TTATAAGTCCTCGCTTAGTTTAGGAGATTTTGTAGGCTTTTTCTACAAAG 14 4405282 0.662701651 7 12 133 0.863636364 0.67669361 0.090909091 0.428571429 0.636363636 14 0 3 19 3L:4405272-4405321 6 8.5 2648 FBgn0035541 1035.333333 200.3066667 308.5366667 0.008209916 0.042434933 0.0275494 -17 -16 -16.5 0.1 dme-miR-8-3p 6mer2-7 AGTATT 3L 4420031 4420036 + 3L_4420031_4420036_+ 0.999848539 1 0.99992427 0.000107127 DOR FBtr0073295|FBtr0073294 4419903|4419903 4420648|4420648 3L + 4419881 4420051 stop_codon DOR FlyBase G28084.1 AACCGCAGCAAGTGCTGCTACTAGGCGGCCACCACCCACGCCACCCACAACCACCCAACACCAACACCACCACCATGCCTCCAGCGCTCGAGGAGCCGACGGAGCCGTAGGAGGAGCATTACAATCATGGCAGGCGACGCGATTTTAATTAGTATTTTAACCTTACCCCCA 85 4420026 0.964096258 17 81 503 0.96039604 1.685741739 0.188118812 0.152941176 0.287128713 85 3 1 97 3L:4419881-4420051 6 DOR FBtr0113141|FBtr0308033|FBtr0073296|FBtr0113140|FBtr0308034|FBtr0073295|FBtr0073294 4419903|4419903|4419903|4419903|4419903|4419903|4419903 4420266|4420266|4420266|4420266|4420266|4420648|4420648 AGTATT 6mer2-7 dme-miR-8-3p 3L + 4419980 4420058 3'utr DOR FlyBase G21268.1 CGGAGCCGTAGGAGGAGCATTACAATCATGGCAGGCGACGCGATTTTAATTAGTATTTTAACCTTACCCCCAGATGAAA 52 4420037 0.799027114 12 50 356 0.961038961 1.86923172 0.142857143 0.384615385 0.584415584 52 3 0 74 3L:4419980-4420058 6 33.5 2649 FBgn0035542 115 6.26 9.503333333 0.291304348 5.3514377 3.52507892 5 -6 -0.5 0.1 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 4420112 4420118 + 3L_4420112_4420118_+ 0.823343782 0.786079876 0.804711829 0.026349556 DOR FBtr0073295|FBtr0073294 4419903|4419903 4420648|4420648 3L + 4420059 4420174 3'utr DOR FlyBase G28084.2 CGAGAGAAAATTCGCAAAAAAAGGAAAAATGCCACAAAAATATCAAAAATCTAGCAGCTACAAGAAACGCATATGTTTAATTAACTAAACTTAACAAATACTTGTGTAAAAACGAA 59 4420110 0.964004218 10 52 180 0.875 1.271066772 0.40625 0.084745763 0.15625 59 6 2 56 3L:4420059-4420174 7 DOR FBtr0113141|FBtr0308033|FBtr0073296|FBtr0113140|FBtr0308034|FBtr0073295|FBtr0073294 4419903|4419903|4419903|4419903|4419903|4419903|4419903 4420266|4420266|4420266|4420266|4420266|4420648|4420648 GCAGCTA 7mer-A1 dme-miR-980-3p 3L + 4420060 4420166 3'utr DOR FlyBase G21268.2 GAGAGAAAATTCGCAAAAAAAGGAAAAATGCCACAAAAATATCAAAAATCTAGCAGCTACAAGAAACGCATATGTTTAATTAACTAAACTTAACAAATACTTGTGTA 28 4420110 0.974409107 9 22 84 0.785714286 1.217483944 0.214285714 0.285714286 0.523809524 28 8 1 33 3L:4420060-4420166 7 30.5 2650 FBgn0035542 115 6.26 9.503333333 0.265217391 4.872204473 3.20940021 2 2 2 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3L 4539056 4539062 + 3L_4539056_4539062_+ 0.521223557 0.521052769 0.521138163 0.000120774 CG11353 FBtr0073309|FBtr0073308 4538997|4538997 4539270|4539270 3L + 4539025 4539085 3'utr CG11353 FlyBase G28099.1 AAGGTCACCGCACACGCCTCCATCTGACAATTGTGATTGCTTTCATGTACAACTAATCATT 63 4539055 0.825982567 7 58 502 0.934210526 1.073107098 0.026315789 0.174603175 0.315789474 63 0 5 71 3L:4539025-4539085 7 CG11353 FBtr0073308|FBtr0073309 4538997|4538997 4539270|4539270 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 4539026 4539093 3'utr CG11353 FlyBase G21280.1 AGGTCACCGCACACGCCTCCATCTGACAATTGTGATTGCTTTCATGTACAACTAATCATTATTATCGA 57 4539062 0.98701345 8 54 474 0.975308642 1.897627091 0 0.263157895 0.481481481 57 2 0 79 3L:4539026-4539093 7 55 2651 FBgn0035557 9.256666667 0.366666667 0.553333333 5.941663666 150 99.39759036 1 -6 -2.5 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 4552958 4552965 + 3L_4552958_4552965_+ 0.500120318 0.469806793 0.484963555 0.021434881 CG11357 FBtr0304987|FBtr0113142|FBtr0073310|FBtr0113143 4552565|4552565|4552565|4552565 4553457|4553457|4553457|4553457 3L + 4552882 4553094 3'utr CG11357 FlyBase G28116.1 AAACTCTAATAGCGGCAACAATAAACGGAGCGCATAACCTTAAGCACAACTCTTAAATCGTAAGAAAACTACAATAGTACTTAATAAACGATAAAATGATTGAAAACTGCTGAAATCAGTGAATAACCAAACCAAATATTGATTTCGATGTAGATCGCGTAACAGTGGACGGAAATATTTATTAAAAAGTATATATACGTAGGGGCAAACGAA 240 4552956 0.930647674 33 229 1274 0.959854015 1.942834494 0.145985401 0.133333333 0.240875912 240 9 2 263 3L:4552882-4553094 8 CG11357 FBtr0113143|FBtr0073310|FBtr0113142|FBtr0304987 4552565|4552565|4552565|4552565 4553457|4553457|4553457|4553457 GTACTTAA 8mer-A1 dme-miR-252-5p 3L + 4552884 4553073 3'utr CG11357 FlyBase G21296.1 ACTCTAATAGCGGCAACAATAAACGGAGCGCATAACCTTAAGCACAACTCTTAAATCGTAAGAAAACTACAATAGTACTTAATAAACGATAAAATGATTGAAAACTGCTGAAATCAGTGAATAACCAAACCAAATATTGATTTCGATGTAGATCGCGTAACAGTGGACGGAAATATTTATTAAAAAGTAT 164 4552956 0.967506674 22 154 818 0.95703125 1.91204483 0.12109375 0.420731707 0.62890625 164 9 2 245 3L:4552884-4553073 8 52 2652 FBgn0035558 4857.766667 204.6066667 314.1433333 0.010704508 0.254146167 0.165529535 2 2 2 0.1 dme-miR-277-3p 6mer2-7 GCATTT 3L 4593187 4593192 - 3L_4593187_4593192_- 0.999871247 0.997620767 0.998746007 0.001591273 Src64B FBtr0343995|FBtr0304989|FBtr0304990 4592893|4592893|4592445 4594640|4594640|4594640 3L - 4593171 4593217 3'utr Src64B FlyBase G34374.1 TTCTGTAGCATAAAACCAAAGTTTAGCATTTCGTATTGAGATATATG 14 4593196 0.779006446 4 12 79 0.857142857 1.255272505 0 0.285714286 0.523809524 14 3 0 18 3L:4593171-4593217 6 Src64B FBtr0304989|FBtr0304990|FBtr0343995 4592893|4592445|4592893 4594640|4594640|4594640 GCATTT 6mer2-7 dme-miR-277-3p 3L - 4593174 4593229 3'utr Src64B FlyBase G25997.1 ATTGTGTGCACATTCTGTAGCATAAAACCAAAGTTTAGCATTTCGTATTGAGATAT 10 4593196 0.974891474 3 10 67 1 1.113943352 0.307692308 0.3 0.461538462 10 0 0 13 3L:4593174-4593229 6 11 2653 FBgn0262733 767.5933333 20.04333333 30.95666667 0.014330505 0.54881091 0.355335415 4 4 4 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 3L 4629397 4629402 + 3L_4629397_4629402_+ 0.806244758 0.980370584 0.893307671 0.123125534 Rpd3 FBtr0073317|FBtr0073317 4629114|4629114 4629467|4629467 3L + 4629368 4629407 3'utr Rpd3 FlyBase G28132.1 AGTGTATAGCTAAGCAAAAAGTGAATGCATACTTACAAGC 9 4629396 0.929642568 3 9 35 1 1.079181246 0 0.333333333 0.5 9 0 0 12 3L:4629368-4629407 6 Rpd3 FBtr0073317|FBtr0073317 4629114|4629114 4629467|4629467 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 3L + 4629343 4629427 3'utr Rpd3 FlyBase G21307.1 AAACACAATTTATTTTAAGATCGAAAGTGTATAGCTAAGCAAAAAGTGAATGCATACTTACAAGCGATCCAATGTGGCGAATAAC 12 4629399 0.957794195 7 10 50 1 1.079181246 0 0.2 0.333333333 10 0 0 12 3L:4629343-4629427 6 6.5 2654 FBgn0015805 1165.29 66.60666667 101.9933333 0.005578011 0.097587829 0.063729656 1 -2 -0.5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 5144303 5144308 - 3L_5144303_5144308_- 0.959782493 0.999062417 0.979422455 0.027775084 CG10671 FBtr0077177|FBtr0077178 5144080|5144080 5144395|5144395 3L - 5144228 5144323 3'utr CG10671 FlyBase G34482.1 CGGATTGGAATTTATACCAAATTTTTGTATATTCAGCAACGATGATATGAAACGATGATGATATTACTAAGCAAGCAGCCGAGGCTGGCACTGGAT 10 5144301 0.98924799 7 8 59 0.866666667 1.113943352 0.2 0.3 0.533333333 10 2 0 13 3L:5144228-5144323 6 CG10671 FBtr0077178|FBtr0077177 5144080|5144080 5144395|5144395 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 5144291 5144345 3'utr CG10671 FlyBase G26060.1 GAAGGAATTGATAGTTAGGTGACGGATTGGAATTTATACCAAATTTTTGTATATT 6 5144301 0.992998419 3 5 54 0.6 0.77815125 0.4 0.333333333 0.6 6 4 0 6 3L:5144291-5144345 6 4 2655 FBgn0035586 278.5933333 18.25333333 27.90333333 0.014357845 0.219138057 0.143352049 -7 -7 -7 0.1 dme-miR-14-3p 7mer-A1 AGACTGA 3L 5158850 5158856 - 3L_5158850_5158856_- 0.823220217 0.823330291 0.823275254 7.79E-05 shep FBtr0308859|FBtr0077174|FBtr0333288|FBtr0333289 5157906|5155819|5155819|5158793 5162466|5162466|5162466|5162466 3L - 5158828 5158871 5'utr shep FlyBase G34491.1 ACGATTATTTGCTTTAGACTGACTACGAACTGAAACTGTAACAA 9 5158858 0.976034573 6 9 65 1 1.041392685 0.181818182 0.111111111 0.272727273 9 0 0 11 3L:5158828-5158871 7 shep FBtr0333288|FBtr0333289|FBtr0308859|FBtr0077174 5155819|5158793|5157906|5155819 5162466|5162466|5162466|5162466 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 5158807 5158869 5'utr shep FlyBase G26066.1 GATTATTTGCTTTAGACTGACTACGAACTGAAACTGTAACAATAACAACAAATGCAGGATTGT 7 5158858 0.982139748 4 7 51 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 3L:5158807-5158869 7 7 2656 FBgn0052423 9763.176667 275.8933333 425.4466667 0.00071698 0.025372124 0.016453296 2 2 2 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3L 5159263 5159269 - 3L_5159263_5159269_- 0.521223855 0.521223855 0.521223855 0 shep FBtr0308859|FBtr0077174|FBtr0333288|FBtr0333289 5157906|5155819|5155819|5158793 5162466|5162466|5162466|5162466 3L - 5159254 5159287 5'utr shep FlyBase G34492.1 AAGCCTAAGCATTGTATTTGTGATTTTTTCGAAT 23 5159270 0.666961311 4 21 237 0.966666667 1.462397998 0.033333333 0.217391304 0.4 23 1 0 29 3L:5159254-5159287 7 shep FBtr0333288|FBtr0333289|FBtr0308859|FBtr0077174 5155819|5158793|5157906|5155819 5162466|5162466|5162466|5162466 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 5159251 5159283 5'utr shep FlyBase G26067.1 CTAAGCATTGTATTTGTGATTTTTTCGAATGTT 6 5159270 0.71937558 4 6 72 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3L:5159251-5159283 7 13.5 2657 FBgn0052423 9763.176667 275.8933333 425.4466667 0.001382747 0.048931954 0.031731357 1 1 1 0.1 dme-miR-14-3p 6mer3-8 AAGACT 3L 5161192 5161197 - 3L_5161192_5161197_- 0.96581494 0.999779678 0.982797309 0.02401674 shep FBtr0308859|FBtr0077172|FBtr0077174|FBtr0333287|FBtr0333288|FBtr0077173|FBtr0333289|FBtr0301599 5157906|5160684|5155819|5160684|5155819|5160684|5158793|5160684 5162466|5162466|5162466|5162466|5162466|5162466|5162466|5162466 3L - 5161169 5161215 3'utr shep FlyBase G34499.1 AAAAAGTGAAGAAAAGCAAAGACTTAACTTAAATAATAGAGAATAGT 27 5161187 0.725049732 5 19 114 0.7 1.021189299 0.266666667 0.074074074 0.166666667 27 8 1 21 3L:5161169-5161215 6 shep FBtr0333288|FBtr0077173|FBtr0333289|FBtr0301599|FBtr0308859|FBtr0077172|FBtr0077174|FBtr0333287 5155819|5160684|5158793|5160684|5157906|5160684|5155819|5160684 5162466|5162466|5162466|5162466|5162466|5162466|5162466|5162466 AAGACT 6mer3-8 dme-miR-14-3p 3L - 5161167 5161213 3'utr shep FlyBase G26073.1 AAAGTGAAGAAAAGCAAAGACTTAACTTAAATAATAGAGAATAGTTA 18 5161185 0.895529979 5 16 89 0.925925926 1.397940009 0.222222222 0.333333333 0.555555556 18 2 0 25 3L:5161167-5161213 6 21 2658 FBgn0052423 9763.176667 275.8933333 425.4466667 0.002150939 0.076116373 0.049359888 -10 -12 -11 0.1 dme-miR-7-5p 8mer-A1 GTCTTCCA 3L 5343757 5343764 - 3L_5343757_5343764_- 0.465911853 0.675298212 0.570605032 0.148058473 lama FBtr0077160|FBtr0077159|FBtr0333595|FBtr0077161 5343617|5343617|5343617|5343617 5343995|5343995|5343995|5343995 3L - 5343737 5343862 3'utr lama FlyBase G34511.1 TCGTATAATTTGTGTGTTCCTAGTTGGTACATATCTTACGTCCATAGTCTTCTAGTGTCTACTGTACTTATGTATGTATGCGTGTCCAATCGATTATTGTCTTCCAGCTGTACAGCTTTTTATTTT 166 5343765 0.778232526 21 154 1685 0.929648241 1.966141733 0.155778894 0.180722892 0.316582915 166 13 1 185 3L:5343737-5343862 8 lama FBtr0077160|FBtr0077159|FBtr0333595|FBtr0077161 5343617|5343617|5343617|5343617 5343995|5343995|5343995|5343995 GTCTTCCA 8mer-A1 dme-miR-7-5p 3L - 5343729 5343879 3'utr lama FlyBase G26083.1 TAGTGTCCTGTCTTGTCTCGTATAATTTGTGTGTTCCTAGTTGGTACATATCTTACGTCCATAGTCTTCTAGTGTCTACTGTACTTATGTATGTATGCGTGTCCAATCGATTATTGTCTTCCAGCTGTACAGCTTTTTATTTTCCGTAGGT 116 5343766 0.958983483 29 111 1139 0.971264368 2.227886705 0.172413793 0.387931034 0.591954023 116 5 0 169 3L:5343729-5343879 8 35.5 2659 FBgn0016031 538.5966667 18.35333333 28.06333333 0.065912031 1.934253542 1.264995843 1 2 1.5 0.1 dme-miR-7-5p 6mer3-8 GTCTTC 3L 5343811 5343816 - 3L_5343811_5343816_- 0.895729738 0.722174113 0.808951925 0.122722342 lama FBtr0077160|FBtr0077159|FBtr0333595|FBtr0077161 5343617|5343617|5343617|5343617 5343995|5343995|5343995|5343995 3L - 5343737 5343862 3'utr lama FlyBase G34511.1 TCGTATAATTTGTGTGTTCCTAGTTGGTACATATCTTACGTCCATAGTCTTCTAGTGTCTACTGTACTTATGTATGTATGCGTGTCCAATCGATTATTGTCTTCCAGCTGTACAGCTTTTTATTTT 166 5343827 0.778232526 21 154 1685 0.929648241 1.966141733 0.155778894 0.180722892 0.316582915 166 13 1 185 3L:5343737-5343862 6 lama FBtr0077160|FBtr0077159|FBtr0333595|FBtr0077161 5343617|5343617|5343617|5343617 5343995|5343995|5343995|5343995 GTCTTC 6mer3-8 dme-miR-7-5p 3L - 5343729 5343879 3'utr lama FlyBase G26083.1 TAGTGTCCTGTCTTGTCTCGTATAATTTGTGTGTTCCTAGTTGGTACATATCTTACGTCCATAGTCTTCTAGTGTCTACTGTACTTATGTATGTATGCGTGTCCAATCGATTATTGTCTTCCAGCTGTACAGCTTTTTATTTTCCGTAGGT 116 5343827 0.958983483 29 111 1139 0.971264368 2.227886705 0.172413793 0.387931034 0.591954023 116 5 0 169 3L:5343729-5343879 6 69.5 2660 FBgn0016031 538.5966667 18.35333333 28.06333333 0.129039046 3.78677806 2.476541157 11 11 11 0.1 dme-miR-1006-3p 7mer-m8 CGAATTT 3L 5343946 5343952 - 3L_5343946_5343952_- 0.578248506 0.410245687 0.494247097 0.118795919 lama FBtr0077160|FBtr0077159|FBtr0333595|FBtr0077161 5343617|5343617|5343617|5343617 5343995|5343995|5343995|5343995 3L - 5343917 5343969 3'utr lama FlyBase G34512.1 AACCCGTAGAACCCAATCGAATTTGTACCCAAAACCCACCTCCATCCATTTTG 13 5343953 0.953770271 6 11 62 0.9375 1.176091259 0 0.230769231 0.375 13 1 0 15 3L:5343917-5343969 7 lama FBtr0077160|FBtr0077159|FBtr0333595|FBtr0077161 5343617|5343617|5343617|5343617 5343995|5343995|5343995|5343995 CGAATTT 7mer-m8 dme-miR-1006-3p 3L - 5343917 5343954 3'utr lama FlyBase G26084.1 ATCGAATTTGTACCCAAAACCCACCTCCATCCATTTTG 7 5343923 0.684880783 4 6 31 0.7 0.84509804 0.1 0.285714286 0.5 7 3 0 7 3L:5343917-5343954 7 5 2661 FBgn0016031 538.5966667 18.35333333 28.06333333 0.009283385 0.272430076 0.178168429 1 -29 -14 0.1 dme-miR-12-5p 7mer-A1 ATACTCA 3L 5356869 5356875 - 3L_5356869_5356875_- 0.823349387 0.823341104 0.823345245 5.87E-06 Klp64D FBtr0077157 5356862 5357220 3L - 5356862 5356905 3'utr Klp64D FlyBase G34519.1 GTGTGCTCTTGGCTTTTAAATAAAAATATGATACTCACACGTAA 30 5356877 0.80619775 6 29 200 0.96969697 1.505149978 0.242424242 0.1 0.181818182 30 1 0 32 3L:5356862-5356905 7 Klp64D FBtr0077157 5356862 5357220 ATACTCA 7mer-A1 dme-miR-12-5p 3L - 5356863 5356929 3'utr Klp64D FlyBase G26088.1 ATTAGGCACAAATATATAACTATTGTGTGCTCTTGGCTTTTAAATAAAAATATGATACTCACACGTA 21 5356877 0.944069004 6 21 122 1 1.505149978 0.0625 0.428571429 0.625 21 0 0 32 3L:5356863-5356929 7 16.5 2662 FBgn0004380 595.0833333 28.55 43.68333333 0.027727209 0.57793345 0.377718428 2 2 2 0.1 dme-miR-282-5p 7mer-A1 GAGGCTA 3L 5362638 5362644 + 3L_5362638_5362644_+ 0.823299057 0.823212183 0.82325562 6.14E-05 CG4769 FBtr0077144 5362329 5362798 3L + 5362536 5362685 3'utr CG4769 FlyBase G28187.1 GATTCAAAATAAAACTAAATAGCTAAATCTAAAACATCCTTGGTAACCTACTGATGGTAACCAAACAAAGATCGGATCGGAAGATTCAATGAGCGGGGGATTGAGGCTACAAAGACTACAGGAGCCTAGCGAAATGATTGATGGATAATG 80 5362636 0.926462037 10 73 237 0.966292135 1.934498451 0.269662921 0.12987013 0.247191011 77 3 0 86 3L:5362536-5362685 7 CG4769 FBtr0077144 5362329 5362798 GAGGCTA 7mer-A1 dme-miR-282-5p 3L + 5362623 5362661 3'utr CG4769 FlyBase G21341.1 AATGAGCGGGGGATTGAGGCTACAAAGACTACAGGAGCC 37 5362636 0.763653892 2 36 90 0.983050847 1.462397998 0.237288136 0.405405405 0.627118644 37 0 1 58 3L:5362623-5362661 7 52 2663 FBgn0035600 2068.833333 167.37 257.41 0.025134939 0.310688893 0.202012354 2 2 2 0.1 dme-miR-33-5p 7mer-A1 AATGCAA 3L 5363602 5363608 - 3L_5363602_5363608_- 0.777618835 0.778222858 0.777920846 0.000427163 Uev1A FBtr0077156|FBtr0077155|FBtr0345026 5362882|5363184|5363148 5363874|5363874|5363874 3L - 5363511 5363659 3'utr Uev1A FlyBase G34531.2 AATGAACGTAATAAAGATCGAGTGCGGTTATTGTGGCAAGAACAACAACCAAATGCAAGCTATATACTATAAGTAAAGGGAACAGCAGCGAAAAATGCGATAGGAGCGTCACTATGAAGAGGTCGTCGTCGTCCCTTCCGTCATGAACT 137 5363606 0.991906987 14 130 743 0.961290323 2.173186268 0.180645161 0.116788321 0.219354839 137 6 0 149 3L:5363511-5363659 7 Uev1A FBtr0345026|FBtr0077155|FBtr0077156 5363148|5363184|5362882 5363874|5363874|5363874 AATGCAA 7mer-A1 dme-miR-33-5p 3L - 5363579 5363643 3'utr Uev1A FlyBase G26097.1 ATCGAGTGCGGTTATTGTGGCAAGAACAACAACCAAATGCAAGCTATATACTATAAGTAAAGGGA 63 5363606 0.987815173 8 61 288 0.97826087 1.954242509 0.163043478 0.349206349 0.554347826 63 2 0 90 3L:5363579-5363643 7 73 2664 FBgn0035601 3984.51 383.0633333 590.3 0.018320948 0.190569009 0.123665933 -2 -2 -2 0.1 dme-miR-184-3p 6mer2-7 CCGTCC 3L 5559567 5559572 - 3L_5559567_5559572_- 0.999997006 0.999999994 0.9999985 2.12E-06 sinu FBtr0077136 5559468 5560751 3L - 5559503 5559625 3'utr sinu FlyBase G34543.1 ATTTTCTAAACCGAGAATTTAGCAATGTATTAAAGCAATACATACGTCTTTTACCGTCCCATATACAATAATATGTGTAACATTTTTATGTACAAACGACTTTTAGCTAAAGCGAAGAATAAT 414 5559574 0.749079152 20 401 2901 0.968565815 1.847748879 0.074656189 0.18115942 0.333988212 414 10 6 493 3L:5559503-5559625 6 sinu FBtr0077136 5559468 5560751 CCGTCC 6mer2-7 dme-miR-184-3p 3L - 5559545 5559594 3'utr sinu FlyBase G26109.2 AAAGCAATACATACGTCTTTTACCGTCCCATATACAATAATATGTGTAAC 203 5559574 0.64272732 8 190 1495 0.94137931 1.959041392 0.031034483 0.310344828 0.517241379 203 15 2 273 3L:5559545-5559594 6 237 2665 FBgn0010894 232.6666667 13.51333333 20.52333333 1.018624642 17.53823384 11.54783174 2 2 2 0.1 dme-miR-184-3p 7mer-m8 TCCGTCC 3L 5559644 5559650 - 3L_5559644_5559650_- 0.66161514 0.661615027 0.661615083 7.07E-08 sinu FBtr0077136 5559468 5560751 3L - 5559630 5559683 3'utr sinu FlyBase G34543.2 TTTTAAAGGTAACAATTAGGTCTGTATTAATCATCCGTCCTTTGCACGTATTTG 441 5559643 0.644803719 12 389 4167 0.874766355 0.945969983 0.143925234 0.183673469 0.327102804 441 15 52 468 3L:5559630-5559683 7 sinu FBtr0077136 5559468 5560751 TCCGTCC 7mer-m8 dme-miR-184-3p 3L - 5559631 5559679 3'utr sinu FlyBase G26110.1 AAAGGTAACAATTAGGTCTGTATTAATCATCCGTCCTTTGCACGTATTT 325 5559643 0.697642387 14 275 3109 0.845338983 0.852784869 0.165254237 0.335384615 0.542372881 325 18 55 399 3L:5559631-5559679 7 364.5 2666 FBgn0010894 232.6666667 13.51333333 20.52333333 1.566618911 26.97335964 17.76027286 -7 -7 -7 0.1 dme-miR-184-3p 7mer-m8 TCCGTCC 3L 5560606 5560612 - 3L_5560606_5560612_- 0.661571067 0.661569422 0.661570245 1.20E-06 sinu FBtr0077136 5559468 5560751 3L - 5560583 5560641 3'utr sinu FlyBase G34547.2 CAACCAAGAGGAAAACAAAACAAAAACATTCCGTCCCCTCAAAGAATTCTCACCCTAAA 2305 5560613 0.949504949 5 2278 7692 0.991147309 2.492760389 0.002832861 0.18308026 0.333215297 2305 17 8 2799 3L:5560583-5560641 7 sinu FBtr0077136 5559468 5560751 TCCGTCC 7mer-m8 dme-miR-184-3p 3L - 5560562 5560640 3'utr sinu FlyBase G26115.1 AACCAAGAGGAAAACAAAACAAAAACATTCCGTCCCCTCAAAGAATTCTCACCCTAAACATTACAGTCGAACTTCTCTA 1540 5560613 0.945764769 10 1526 5069 0.988743809 2.438542349 0.000900495 0.319480519 0.528140477 1540 18 7 2196 3L:5560562-5560640 7 1910.5 2667 FBgn0010894 232.6666667 13.51333333 20.52333333 8.211318052 141.3788851 93.0891668 1 1 1 0.1 dme-miR-986-5p 7mer-m8 ATTCGAG 3L 5564931 5564937 + 3L_5564931_5564937_+ 0.671791993 0.671745385 0.671768689 3.30E-05 Sras FBtr0077083 5564827 5565103 3L + 5564918 5564953 3'utr Sras FlyBase G28194.1 AATTGCATATCCCATTCGAGCCAATTCCGCGCACAA 26 5564932 0.737980404 2 26 142 1 1.491361694 0 0.192307692 0.322580645 26 0 0 31 3L:5564918-5564953 7 Sras FBtr0077083 5564827 5565103 ATTCGAG 7mer-m8 dme-miR-986-5p 3L + 5564906 5564955 3'utr Sras FlyBase G21345.1 TGTTTATATGTAAATTGCATATCCCATTCGAGCCAATTCCGCGCACAAAA 21 5564932 0.965155172 4 20 116 1 1.462397998 0 0.285714286 0.482758621 21 0 0 29 3L:5564906-5564955 7 23 2668 FBgn0029121 69.33333333 6.623333333 10.01666667 0.331730769 3.472571716 2.296173045 -1 -1 -1 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3L 5566128 5566133 + 3L_5566128_5566133_+ 0.916589047 0.654014494 0.785301771 0.18566821 bc10 FBtr0077084 5565863 5566765 3L + 5565977 5566185 3'utr bc10 FlyBase G28197.1 GCGTTGTTACAGCTTTACATCCTCGAAGATCGGAGAAAGTCAGAGGAGCAGGCGGATATAAGGGATTAGGGATAGCTTGACTAAGTCGGTAAAATCAAGTGATCAGTGATACAAGTGATGAGTGAGTCCGACCAGGAACAAAGATTGTGTGTCTAGTAATACCCATTGCATTATTTCCAGCCCTCTATATGTTACCTTCATAATTCTCT 41 5566121 0.983745117 19 38 282 0.954545455 1.322219295 0.181818182 0.073170732 0.136363636 41 1 1 42 3L:5565977-5566185 6 bc10 FBtr0077084 5565863 5566765 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 5565909 5566210 3'utr bc10 FlyBase G21349.1 AGCCCCCGTAGTCATAGTCAACGAAGATAAAGTGCTAATAATAACTACCTTTTTACGGAATTACGTTCGCGTTGTTACAGCTTTACATCCTCGAAGATCGGAGAAAGTCAGAGGAGCAGGCGGATATAAGGGATTAGGGATAGCTTGACTAAGTCGGTAAAATCAAGTGATCAGTGATACAAGTGATGAGTGAGTCCGACCAGGAACAAAGATTGTGTGTCTAGTAATACCCATTGCATTATTTCCAGCCCTCTATATGTTACCTTCATAATTCTCTTGATTATGAATTGTAATTGTATTGT 56 5566121 0.999929823 27 54 328 0.967032967 1.944482672 0.186813187 0.464285714 0.67032967 56 3 0 88 3L:5565909-5566210 6 10 2669 FBgn0040239 273.54 24.22 36.96666667 0.036557725 0.412881916 0.270513977 7 7 7 0.1 dme-miR-33-5p 8mer-A1 CAATGCAA 3L 5566343 5566350 + 3L_5566343_5566350_+ 0.634551427 0.634552152 0.634551789 5.66E-07 bc10 FBtr0077084 5565863 5566765 3L + 5566223 5566377 3'utr bc10 FlyBase G28198.1 TAAAGCTTAGACGAATTTAGTTTATACGAAGAAAGCGCTACGAAAACGTATTGTACATCACCCCACCCAAAAGCCCTACCCTTCAAATCAAAAGAAAAAACCCCTATCCAACCCACTTGTCAATGCAACTTACGATTAGTCATATATGTTATATA 135 5566342 0.974351947 20 126 770 0.949685535 1.701855693 0.050314465 0.148148148 0.27672956 135 6 2 151 3L:5566223-5566377 8 bc10 FBtr0077084 5565863 5566765 CAATGCAA 8mer-A1 dme-miR-33-5p 3L + 5566318 5566388 3'utr bc10 FlyBase G21351.1 AAAAACCCCTATCCAACCCACTTGTCAATGCAACTTACGATTAGTCATATATGTTATATATAGATAAATAC 42 5566342 0.979956428 8 37 263 0.921875 1.770852012 0.046875 0.404761905 0.609375 42 5 0 59 3L:5566318-5566388 8 62.5 2670 FBgn0040239 273.54 24.22 36.96666667 0.228485779 2.580511974 1.690712353 1 1 1 0.1 dme-miR-79-3p 6mer3-8 TAGCTT 3L 5589931 5589936 + 3L_5589931_5589936_+ 0.94371103 0.543229139 0.743470085 0.283183467 l(3)psg2 FBtr0077085 5589915 5590390 3L + 5589906 5590027 stop_codon l(3)psg2 FlyBase G28228.1 AGACCCAGTAGTAGATCCATCTTGCTAGCTTGATTTCTTTAATTATAGTGTTCTTTAGATAATTATTCTTAATTTTAAATATGAGGATCCTCAATGCCTACACAGATTTATTTCGTAAATAT 56 5589943 0.873742243 23 53 631 0.953846154 1.792391689 0.138461538 0.160714286 0.276923077 56 3 0 62 3L:5589906-5590027 6 l(3)psg2 FBtr0077085 5589915 5590390 TAGCTT 6mer3-8 dme-miR-79-3p 3L + 5589860 5589971 stop_codon l(3)psg2 FlyBase G21375.1 CCAGCCGAACAGCATGTGGTGGGCGTGAAGCCGCAGCTCCTTGTGGAGACCCAGTAGTAGATCCATCTTGCTAGCTTGATTTCTTTAATTATAGTGTTCTTTAGATAATTAT 33 5589943 0.989935993 12 31 332 0.945454545 1.238882089 0.181818182 0.515151515 0.709090909 33 1 2 52 3L:5589860-5589971 6 29.5 2671 FBgn0035617 542.34 10 15.43333333 0.054393923 2.95 1.911447084 -12 -12 -12 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA 3L 5590070 5590077 + 3L_5590070_5590077_+ 0.625358721 0.625363647 0.625361184 3.46E-06 l(3)psg2 FBtr0077085 5589915 5590390 3L + 5590048 5590128 3'utr l(3)psg2 FlyBase G28229.1 AATTGACCATTTGTAAACAAGTTGCATTTATTCATAGAAGGTCGTTTTCGATTTATTCAGCTTTAGGTTTCTATGTCATTT 31 5590069 0.892120342 5 31 292 1 1.591064607 0.102564103 0.225806452 0.384615385 31 0 0 39 3L:5590048-5590128 8 l(3)psg2 FBtr0077085 5589915 5590390 TGCATTTA 8mer-A1 dme-miR-277-3p 3L + 5590057 5590089 3'utr l(3)psg2 FlyBase G21376.1 TTTGTAAACAAGTTGCATTTATTCATAGAAGGT 14 5590069 0.893072524 2 11 100 0.85 1.230448921 0.1 0.285714286 0.5 14 3 0 17 3L:5590057-5590089 8 17 2672 FBgn0035617 542.34 10 15.43333333 0.03134565 1.7 1.101511879 1 1 1 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 5601193 5601198 - 3L_5601193_5601198_- 1 0.999999688 0.999999844 2.12E-07 CG10590 FBtr0077127 5601094 5601788 3L - 5601113 5601219 3'utr CG10590 FlyBase G34576.1 AATCTATGCAACTGCAACAAAATGTGACTTGAACTTGTTTGCGCCAATTAAGTTATGTACGATGCAAGAAATGTGCTGATTAGCAATAGTCGATAATCTAATAATAA 51 5601196 0.748760014 15 49 303 0.96969697 1.806179974 0.196969697 0.254901961 0.424242424 51 2 0 64 3L:5601113-5601219 6 CG10590 FBtr0077127 5601094 5601788 ATGTGA 6mer3-8 dme-miR-1003-3p 3L - 5601110 5601220 3'utr CG10590 FlyBase G26140.1 CAATCTATGCAACTGCAACAAAATGTGACTTGAACTTGTTTGCGCCAATTAAGTTATGTACGATGCAAGAAATGTGCTGATTAGCAATAGTCGATAATCTAATAATAAATT 39 5601191 0.979165506 14 36 252 0.948275862 1.740362689 0.206896552 0.384615385 0.586206897 39 3 0 55 3L:5601110-5601220 6 27 2673 FBgn0035622 320.01 14.52333333 22.10333333 0.084372363 1.859077347 1.221535213 -2 -7 -4.5 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA 3L 5601454 5601461 - 3L_5601454_5601461_- 0.625364235 0.625364253 0.625364244 7.07E-08 CG10590 FBtr0077127 5601094 5601788 3L - 5601430 5601498 3'utr CG10590 FlyBase G34577.1 ATTTGGGAAAACATTGTGAATTAAAAGCTCTTTCTGTTGCATTTACGTTTTGCTAGTTTTAAGAGTCAA 13 5601462 0.99246232 7 12 133 0.933333333 1.146128036 0.2 0.153846154 0.266666667 13 1 0 14 3L:5601430-5601498 8 CG10590 FBtr0077127 5601094 5601788 TGCATTTA 8mer-A1 dme-miR-277-3p 3L - 5601431 5601499 3'utr CG10590 FlyBase G26141.1 AATTTGGGAAAACATTGTGAATTAAAAGCTCTTTCTGTTGCATTTACGTTTTGCTAGTTTTAAGAGTCA 14 5601485 0.985715514 5 13 113 0.947368421 1.255272505 0.473684211 0.214285714 0.421052632 14 1 0 18 3L:5601431-5601499 8 7.5 2674 FBgn0035622 320.01 14.52333333 22.10333333 0.023436768 0.516410374 0.339315337 1 24 12.5 0.1 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3L 5659773 5659779 - 3L_5659773_5659779_- 0.620174265 0.620178857 0.620176561 3.25E-06 Sse FBtr0077125 5659698 5659878 3L - 5659753 5659832 3'utr Sse FlyBase G34593.1 GGAACTGTGTACAATAATTTAATTTAATTGAACTACTTCATTCAAGTGGAAAGTGGTGCTCAAAGTTTGCATTAAACGCT 63 5659779 0.971379222 9 60 344 0.961038961 1.86923172 0.181818182 0.158730159 0.311688312 63 3 0 74 3L:5659753-5659832 7 Sse FBtr0077125 5659698 5659878 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3L - 5659734 5659803 3'utr Sse FlyBase G26150.1 GAACTACTTCATTCAAGTGGAAAGTGGTGCTCAAAGTTTGCATTAAACGCTAAATGTAACACTCAGAATA 33 5659779 0.963026559 4 33 168 1 1.681241237 0.208333333 0.333333333 0.541666667 33 0 0 48 3L:5659734-5659803 7 44.5 2675 FBgn0035627 140.3333333 7.786666667 11.84333333 0.317102138 5.71489726 3.757388123 0 0 0 0.1 dme-miR-13b-2-5p 6mer2-7 TTGACG 3L 574216 574221 + 3L_574216_574221_+ 0.999740344 1 0.999870172 0.000183636 hipk FBtr0072552|FBtr0331786|FBtr0072551 574200|574200|574200 581099|576047|576047 3L + 574189 574240 stop_codon hipk FlyBase G26816.2 TGGGGCTGAGTAGACCGACGATGGGAGTTGACGGGGAGAGGGGCGATGAGGA 12 574217 0.813383664 5 10 27 0.923076923 1.079181246 0.538461538 0.083333333 0.153846154 12 1 0 12 3L:574189-574240 6 hipk FBtr0072552|FBtr0331786|FBtr0072551 574200|574200|574200 581099|576047|576047 TTGACG 6mer2-7 dme-miR-13b-2-5p 3L + 574155 574239 stop_codon hipk FlyBase G20277.1 ACGCGGCGCACTTTGCGCCCACCAACATATGGTATGGGGCTGAGTAGACCGACGATGGGAGTTGACGGGGAGAGGGGCGATGAGG 13 574211 0.951330709 8 11 46 0.818181818 1.255272505 0.545454545 0.538461538 0.727272727 13 4 0 18 3L:574155-574239 6 7.5 2676 FBgn0035142 10724.84 157.7366667 241.6366667 0.000699311 0.0475476 0.031038336 -1 5 2 0.1 dme-bantam-3p 7mer-A1 GATCTCA 3L 574752 574758 + 3L_574752_574758_+ 0.752651744 0.823349562 0.788000653 0.049990965 hipk FBtr0072552|FBtr0331786|FBtr0072551 574200|574200|574200 581099|576047|576047 3L + 574730 574773 3'utr hipk FlyBase G26819.1 ATTTTTTTTCGGGGTCCCGCGGGATCTCATTTCTGCTACTATTA 24 574759 0.631444071 8 22 206 0.9375 1.477121255 0.15625 0.291666667 0.46875 24 2 0 30 3L:574730-574773 7 hipk FBtr0072552|FBtr0331786|FBtr0072551 574200|574200|574200 581099|576047|576047 GATCTCA 7mer-A1 dme-bantam-3p 3L + 574729 574772 3'utr hipk FlyBase G20279.1 TATTTTTTTTCGGGGTCCCGCGGGATCTCATTTCTGCTACTATT 18 574760 0.729626507 7 16 125 0.966666667 1.462397998 0.033333333 0.388888889 0.633333333 18 1 0 29 3L:574729-574772 7 20 2677 FBgn0035142 10724.84 157.7366667 241.6366667 0.00186483 0.126793601 0.082768895 -7 -8 -7.5 0.1 dme-miR-307a-3p 6mer2-7 GTTGTG 3L 574867 574872 + 3L_574867_574872_+ 0.999427596 0.976888648 0.988158122 0.01593748 hipk FBtr0072552|FBtr0331786|FBtr0072551 574200|574200|574200 581099|576047|576047 3L + 574815 574958 3'utr hipk FlyBase G26820.1 AAGCACTCCTACACGCAGCTGGGTGTACAGTGCTCAGGCAAACTTTTGGCAAGTTGTGCATCAGCACAATTTCGCACCCACACACACTACAGCTATAGCTTCTATACCCTCGAAATATGCCAGTTAGATGCATATCGAGAGATG 33 574859 0.820714173 19 31 184 1 1.62324929 0.333333333 0.272727273 0.428571429 33 0 0 42 3L:574815-574958 6 hipk FBtr0072552|FBtr0331786|FBtr0072551 574200|574200|574200 581099|576047|576047 GTTGTG 6mer2-7 dme-miR-307a-3p 3L + 574811 574885 3'utr hipk FlyBase G20280.1 TGTAAAGCACTCCTACACGCAGCTGGGTGTACAGTGCTCAGGCAAACTTTTGGCAAGTTGTGCATCAGCACAATT 10 574859 0.986064835 5 8 69 0.75 0.954242509 0.166666667 0.2 0.333333333 10 3 0 9 3L:574811-574885 6 10 2678 FBgn0035142 10724.84 157.7366667 241.6366667 0.000932415 0.063396801 0.041384448 8 8 8 0.1 dme-miR-14-3p 7mer-A1 AGACTGA 3L 5750322 5750328 - 3L_5750322_5750328_- 0.823349562 0.823349562 0.823349562 0 DnaJ-1 FBtr0077124|FBtr0077123 5750027|5750027 5750588|5750588 3L - 5750070 5750551 3'utr DnaJ-1 FlyBase G34598.1 CGCATATAATTGTTATCACTTTAGTTAAGGCCTATATTTAATTTACCGTACGTACTCGTAAGACAACTTAGCCTAACCAATTGTAGCCCTAAGCTAGTGAGTGTGCCAAGCGAAGAGCTGTAGATATTGGCCGAGGATGCAAGCGCTGGATAGGATTAGGAAAGAGAACAACACACACACACACACACACATAAAGCAGCCCGTGTAGCCCGTTTCGTGTTGGAGACTGATCGATTATTAGCTATTTAGCATTACACAAATTCCATAAGTTGTTTTGTTTACCGCCACATGAATCGGTGCCTCAACATCTTATACATAATAATCCCAAAACAAAATATTAAATAAATGAGGTATTATAAATTTAAAGTAACTAACCATTTTTCAAGCAAAGCACATTTTCGGCATTCCAACACGGGGAGGTTACATCAGTTAGTAGAACACTTATAGATTTATACGCCGTAAGGACATAGTACGTTTTAGTA 679 5750336 0.971579659 70 613 3762 0.910539216 1.829596129 0.234068627 0.176730486 0.31495098 679 63 10 743 3L:5750070-5750551 7 DnaJ-1 FBtr0077124|FBtr0077123 5750027|5750027 5750588|5750588 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 5750185 5750496 3'utr DnaJ-1 FlyBase G26155.1 TCGTAAGACAACTTAGCCTAACCAATTGTAGCCCTAAGCTAGTGAGTGTGCCAAGCGAAGAGCTGTAGATATTGGCCGAGGATGCAAGCGCTGGATAGGATTAGGAAAGAGAACAACACACACACACACACACACATAAAGCAGCCCGTGTAGCCCGTTTCGTGTTGGAGACTGATCGATTATTAGCTATTTAGCATTACACAAATTCCATAAGTTGTTTTGTTTACCGCCACATGAATCGGTGCCTCAACATCTTATACATAATAATCCCAAAACAAAATATTAAATAAATGAGGTATTATAAATTTAAAG 410 5750337 0.975410799 48 353 2257 0.861685215 2.256878032 0.255961844 0.395121951 0.60572337 410 85 2 542 3L:5750185-5750496 7 179.5 2679 FBgn0263106 2505.54 158.3466667 242.02 0.071641243 1.13358875 0.741674242 8 9 8.5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 5761437 5761442 + 3L_5761437_5761442_+ 0.905374987 0.998894602 0.952134794 0.066128343 Ubp64E FBtr0077095|FBtr0306259 5761383|5761383 5761886|5761886 3L + 5761433 5761468 3'utr Ubp64E FlyBase G28259.1 GTACACCAAACCATGTATGTAAGCGACGGCAGACCA 6 5761447 0.971992641 2 3 21 0.714285714 0.698970004 0.285714286 0.166666667 0.285714286 6 2 0 5 3L:5761433-5761468 6 Ubp64E FBtr0077095|FBtr0306259 5761383|5761383 5761886|5761886 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 5761428 5761464 3'utr Ubp64E FlyBase G21403.1 AAAAAGTACACCAAACCATGTATGTAAGCGACGGCAG 6 5761447 0.904297503 3 6 17 1 0.903089987 0.375 0.333333333 0.5 6 0 0 8 3L:5761428-5761464 6 5.5 2680 FBgn0016756 596.6966667 13.13 20.13333333 0.009217414 0.418888043 0.273178808 -10 -10 -10 0.1 dme-miR-2a-2-5p 7mer-A1 GATGAGA 3L 5761766 5761772 + 3L_5761766_5761772_+ 0.587169569 0.600201641 0.593685605 0.009215016 Ubp64E FBtr0077095|FBtr0306259 5761383|5761383 5761886|5761886 3L + 5761682 5761847 3'utr Ubp64E FlyBase G28261.1 TGGGGTGGCCAAGTGAGCACAGCACTAAGTGACGTTTAACATAACGAAGTTATTCTTGCAACTTTCGTAATACAAGAGTTCAAAGATGAGACTGTAAAATTTAAAATAACAAAAGGCAAGAAATCTAAATTACAAATTGTATAATGTGAATGTGAACATCAAAACT 1197 5761768 0.972437919 19 1180 7016 0.985294118 3.127104798 0.0125 0.11946533 0.225 1197 20 0 1340 3L:5761682-5761847 7 Ubp64E FBtr0077095|FBtr0306259 5761383|5761383 5761886|5761886 GATGAGA 7mer-A1 dme-miR-2a-2-5p 3L + 5761746 5761848 3'utr Ubp64E FlyBase G21405.1 TCGTAATACAAGAGTTCAAAGATGAGACTGTAAAATTTAAAATAACAAAAGGCAAGAAATCTAAATTACAAATTGTATAATGTGAATGTGAACATCAAAACTA 760 5761768 0.947975984 15 751 4368 0.989954338 2.733999287 0.00456621 0.328947368 0.534246575 760 10 1 1084 3L:5761746-5761848 7 942.5 2681 FBgn0016756 596.6966667 13.13 20.13333333 1.579529521 71.78217822 46.81291391 -2 -2 -2 0.1 dme-miR-11-3p 7mer-m1 TGTGATG 3L 576386 576392 + 3L_576386_576392_+ 0.61207112 0.61207112 0.61207112 0 hipk FBtr0072552 574200 581099 3L + 576102 576567 3'utr hipk FlyBase G26826.1 TCGTAGTTAGAATTAAACTTAACTTTCGCGATAAAATAACCAAGCAGCAACTAATTTTTCGCCCTCCTGGGGTCGATTACTCGGTTGTCCCAACCGAGAATTTATTAAAATCGGTCCTTCGAGGGAGGCACTTCCTATATAATGAATTACATGCTGATACAAAGCAGAAATATTTAAACCATCCTTCGCCCCTTCCTAGATCAGCTGTGTACAGTAGGCTATTTTGGGATCGGGATCGAGATGAATCAACTCCGACGATTGGAAAAGATCTAGCATATAATTATTGTGATGTAGTTTTTAACGAGGAGCAGAGAAGTCCGCAAACGTTTTTTGTCAGTCGTCGTCGTCGTCGTCGGCGAATAGAAATTACCTAAAATTACGAATAACCAATTGCGATACGGATACGGAATATGCATCTATATGTTAACTAATTAGTGTGCAGGATTCAATAGCGTTAGCACGACAA 2062 576384 0.895443614 90 1833 20753 0.89198172 1.553680794 0.374740341 0.143549952 0.266306606 2062 201 59 2147 3L:576102-576567 7 hipk FBtr0072552 574200 581099 TGTGATG 7mer-m1 dme-miR-11-3p 3L + 576212 576418 3'utr hipk FlyBase G20292.1 TCGGTCCTTCGAGGGAGGCACTTCCTATATAATGAATTACATGCTGATACAAAGCAGAAATATTTAAACCATCCTTCGCCCCTTCCTAGATCAGCTGTGTACAGTAGGCTATTTTGGGATCGGGATCGAGATGAATCAACTCCGACGATTGGAAAAGATCTAGCATATAATTATTGTGATGTAGTTTTTAACGAGGAGCAGAGAAGT 1293 576384 0.863780343 34 1041 14107 0.799591002 1.28575173 0.440695297 0.373549884 0.585889571 1293 312 80 1564 3L:576212-576418 7 1390 2682 FBgn0035142 10724.84 157.7366667 241.6366667 0.129605663 8.81215528 5.752438234 2 2 2 0.1 dme-miR-970-3p 7mer-A1 CTTATGA 3L 577254 577260 + 3L_577254_577260_+ 0.823346623 0.82334844 0.823347531 1.27E-06 hipk FBtr0072552 574200 581099 3L + 577196 577276 3'utr hipk FlyBase G26827.4 AAAACAAGAAAACAAATCATGAACGCTTTAAATGTAACAAAAACGAAACGTTAATAGACTTATGAAAACAACAAACAAATT 569 577250 0.958469704 11 552 2852 0.973611111 2.368596763 0.118055556 0.20913884 0.375 569 17 2 701 3L:577196-577276 7 hipk FBtr0072552 574200 581099 CTTATGA 7mer-A1 dme-miR-970-3p 3L + 577196 577277 3'utr hipk FlyBase G20296.1 AAAACAAGAAAACAAATCATGAACGCTTTAAATGTAACAAAAACGAAACGTTAATAGACTTATGAAAACAACAAACAAATTA 414 577250 0.954887489 10 405 2070 0.979166667 2.183981219 0.088141026 0.376811594 0.586538462 414 10 3 611 3L:577196-577277 7 460.5 2683 FBgn0035142 10724.84 157.7366667 241.6366667 0.042937703 2.919422666 1.905753818 4 4 4 0.1 dme-miR-8-3p 6mer2-7 AGTATT 3L 577575 577580 + 3L_577575_577580_+ 0.999993115 0.999999999 0.999996557 4.88E-06 hipk FBtr0072552 574200 581099 3L + 577361 577612 3'utr hipk FlyBase G26828.1 TTAAAGTTATATTAAACAAACTCACACTCAACAAATAAATAAGCAGGCAGGTGGACCACGGTCGTTAGCAGACTTTTGTGGCCCACTGTCGGAGGACTTGTATTTAGGAGGAACTCTGGGTGGCTTTCACCACCAGCGAAATGCGGAGAGATCCGCACAAACACTCTAATATACGTATATATTTAAATGAGAAATGTTTTAACTGTGTAGCCTTAGTATTTGTACTCGTCGTCCTCTCGATTTCCGACAAAA 358 577557 0.999951535 45 336 3222 0.934146341 1.88422877 0.146341463 0.125698324 0.236585366 358 23 4 383 3L:577361-577612 6 hipk FBtr0072552 574200 581099 AGTATT 6mer2-7 dme-miR-8-3p 3L + 577533 577639 3'utr hipk FlyBase G20298.1 ACGTATATATTTAAATGAGAAATGTTTTAACTGTGTAGCCTTAGTATTTGTACTCGTCGTCCTCTCGATTTCCGACAAAAATATGATGATATACGATACTGTAGGGC 170 577566 0.802425325 21 146 1635 0.873469388 1.631443769 0.093877551 0.317647059 0.526530612 170 27 4 214 3L:577533-577639 6 139 2684 FBgn0035142 10724.84 157.7366667 241.6366667 0.012960566 0.881215528 0.575243823 18 9 13.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 5777529 5777535 - 3L_5777529_5777535_- 0.752289589 0.754005624 0.753147606 0.001213395 Myt1 FBtr0077118|FBtr0077118|FBtr0077118 5777474|5777474|5777474 5777763|5777763|5777763 3L - 5777515 5777584 3'utr Myt1 FlyBase G34629.1 AATGTTAATGCTTCTTTAGAAGAACTTGTTGAACTTGAACATATAATCATGTGATATATATACGAAAAGC 28 5777539 0.853584963 9 23 197 0.921052632 1.243038049 0.184210526 0.25 0.447368421 28 2 1 35 3L:5777515-5777584 7 Myt1 FBtr0077118|FBtr0077118|FBtr0077118 5777474|5777474|5777474 5777763|5777763|5777763 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 5777498 5777555 3'utr Myt1 FlyBase G26181.1 TGAACTTGAACATATAATCATGTGATATATATACGAAAAGCGATTTGAAAAGTTTAAA 21 5777538 0.970630995 7 17 157 0.814814815 1.041392685 0.074074074 0.238095238 0.407407407 21 4 1 22 3L:5777498-5777555 7 19 2685 FBgn0040298 171.3866667 10.89333333 16.77 0.110860433 1.744186047 1.132975552 4 3 3.5 0.1 dme-miR-2b-2-5p 6mer3-8 TTGAAG 3L 5789991 5789996 - 3L_5789991_5789996_- 0.998511433 0.999999986 0.99925571 0.001052599 Bre1 FBtr0344538 5789829 5790544 3L - 5789977 5790016 3'utr Bre1 FlyBase G34637.1 TTTAAAAGTCGCGCTTTGCTTTGAAGGGCTGCTAACTTGG 14 5790000 0.686575056 5 14 105 1 1.204119983 0.3125 0.142857143 0.25 14 0 0 16 3L:5789977-5790016 6 Bre1 FBtr0344538 5789829 5790544 TTGAAG 6mer3-8 dme-miR-2b-2-5p 3L - 5789961 5790021 3'utr Bre1 FlyBase G26187.1 ATCCGTTTAAAAGTCGCGCTTTGCTTTGAAGGGCTGCTAACTTGGTTATAATTGATAAGTA 10 5789997 0.986866783 4 8 77 0.857142857 1.079181246 0.071428571 0.4 0.571428571 10 2 0 12 3L:5789961-5790021 6 11 2686 FBgn0086694 838.4133333 27.30333333 41.84333333 0.01312002 0.402881211 0.262885366 4 1 2.5 0.1 dme-miR-932-5p 6mer2-7 GAATTG 3L 5799004 5799009 - 3L_5799004_5799009_- 0.999956762 0.999874367 0.999915565 5.83E-05 S6k FBtr0077114|FBtr0333264 5798946|5797547 5800429|5800429 3L - 5798976 5799039 3'utr S6k FlyBase G34651.1 AAGATGTCAAATATAATCAAAAGGTGCTTTGAATTGTTTAAAAAGACAAGACAACTACAGATTA 144 5799011 0.716662542 11 139 1020 0.969512195 1.900367129 0.018292683 0.125 0.231707317 144 4 1 159 3L:5798976-5799039 6 S6k FBtr0077114|FBtr0333264 5798946|5797547 5800429|5800429 GAATTG 6mer2-7 dme-miR-932-5p 3L - 5798997 5799039 3'utr S6k FlyBase G26200.1 AAGATGTCAAATATAATCAAAAGGTGCTTTGAATTGTTTAAAA 82 5799011 0.721595786 5 78 582 0.962616822 2.012837225 0 0.219512195 0.401869159 82 4 0 103 3L:5798997-5799039 6 110.5 2687 FBgn0015806 3238.726667 104.32 160.0233333 0.034118347 1.059240798 0.690524299 2 2 2 0.1 dme-miR-33-5p 7mer-A1 AATGCAA 3L 5812155 5812161 + 3L_5812155_5812161_+ 0.779514348 0.777685845 0.778600096 0.001292945 CG5537 FBtr0310534 5811928 5812228 3L + 5812008 5812208 intron-3'utr CG5537 FlyBase G28303.1 CCTGCGTTGCGCTCCACTAACAAATGCTACCCTCTCTCACTCTGTTTCGTCCTCCAGATTGCATTTGAGACACACAGACAAATAGACGACCCCTGCGGCCAACCAAACTACTACTTAGCAACTGTTAGCTTTTCACAACTGGCTTTTAATGCAACTCTCAAATACGTTACGTTCGTTACGCACTATTGTAAATATAGAAAC 178 5812132 0.991458247 29 170 1114 0.952606635 2.303196057 0.09478673 0.151685393 0.28436019 178 10 0 201 3L:5812008-5812208 7 CG5537 FBtr0310534 5811928 5812228 AATGCAA 7mer-A1 dme-miR-33-5p 3L + 5812042 5812172 intron-3'utr CG5537 FlyBase G21437.1 TCTCACTCTGTTTCGTCCTCCAGATTGCATTTGAGACACACAGACAAATAGACGACCCCTGCGGCCAACCAAACTACTACTTAGCAACTGTTAGCTTTTCACAACTGGCTTTTAATGCAACTCTCAAATAC 100 5812157 0.990433733 16 93 650 0.956521739 2.187520721 0.093167702 0.41 0.633540373 100 7 0 154 3L:5812042-5812172 7 44 2688 FBgn0035639 210.32 23.03 35.33333333 0.209205021 1.910551455 1.245283019 23 -2 10.5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 3L 582986 582993 - 3L_582986_582993_- 0.616801622 0.639278266 0.628039944 0.015893427 Kah FBtr0072563 582822 583983 3L - 582917 583044 3'utr Kah FlyBase G33052.1 CGATTCGACTCGATTCACTCCGATTCGATCTACAGCTCTACAGCTAATCGCACCAAAGATACTTCGATTTAGATGCGCACGCATACTACCTTTATTTACTCGTACTTACCATATACACCAAAAGATAT 70 582985 0.981867481 18 64 470 0.911392405 1.857332496 0.151898734 0.128571429 0.227848101 70 7 0 72 3L:582917-583044 8 Kah FBtr0072563 582822 583983 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 582920 583041 3'utr Kah FlyBase G25000.1 TTCGACTCGATTCACTCCGATTCGATCTACAGCTCTACAGCTAATCGCACCAAAGATACTTCGATTTAGATGCGCACGCATACTACCTTTATTTACTCGTACTTACCATATACACCAAAAGA 62 582971 0.966015266 20 52 398 0.867346939 1.452297671 0.102040816 0.370967742 0.602040816 62 11 2 85 3L:582920-583041 8 33 2689 FBgn0035144 229 9.92 15.31333333 0.144104803 3.326612903 2.154984763 -8 -22 -15 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3L 583302 583308 - 3L_583302_583308_- 0.661615455 0.661615458 0.661615456 0 Kah FBtr0072563 582822 583983 3L - 583217 583365 3'utr Kah FlyBase G33054.1 AAGGCATTGATCGGCTTCCTGCTTCCGGCACGGAAGTCGTTCCAAAACGAGAGAATTTCTAGTCTTTATATTTAAATAAAGCGCACATTTGGCGAGATCGGGAGCATTCCCGATCCCATCCCCTTTTGTGCGTGGCGTTACTTTAAGCA 267 583309 0.864403061 18 255 2569 0.952229299 2.174641193 0.544585987 0.119850187 0.251592357 267 14 1 299 3L:583217-583365 7 Kah FBtr0072563 582822 583983 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3L - 583279 583327 3'utr Kah FlyBase G25003.1 GTTCCAAAACGAGAGAATTTCTAGTCTTTATATTTAAATAAAGCGCACA 180 583309 0.988777763 10 169 1757 0.948412698 1.679427897 0.511904762 0.3 0.5 180 9 4 239 3L:583279-583327 7 207.5 2690 FBgn0035144 229 9.92 15.31333333 0.906113537 20.91733871 13.55028298 1 1 1 0.1 dme-miR-31a-5p 7mer-A1 CTTGCCA 3L 583590 583596 - 3L_583590_583596_- 0.822836193 0.822719786 0.82277799 8.23E-05 Kah FBtr0072563 582822 583983 3L - 583435 583745 3'utr Kah FlyBase G33055.2 CACAGCTCGTCGAACAGAAGAGTTCCCTCTTCTCGGAAAACTCCAAGGAAGGCGAGGTCATACACAGTAGATATAGAGAGACAAGGTTGGATCGATTCCCGATTGATCGTTTGATCTTCACTTAGTTGTAATAAGAGACTTCTTAGAGACTTGCCAAGAACAGCGACAAAAAACCAATGTAACCAGTATTTTTTTATAGCACATACGATTACCGATCGATCGGAGAGCGAAAGATATAGCATCCCAGCCCCAGACGATCGAACTCCGCAGCCAAGCTACAAACTTTACACATAGTCATCTAGCTTTATGAT 243 583603 0.983808384 46 227 1793 0.934782609 1.809559715 0.170289855 0.111111111 0.217391304 243 15 3 258 3L:583435-583745 7 Kah FBtr0072563 582822 583983 CTTGCCA 7mer-A1 dme-miR-31a-5p 3L - 583507 583705 3'utr Kah FlyBase G25007.1 CTCCAAGGAAGGCGAGGTCATACACAGTAGATATAGAGAGACAAGGTTGGATCGATTCCCGATTGATCGTTTGATCTTCACTTAGTTGTAATAAGAGACTTCTTAGAGACTTGCCAAGAACAGCGACAAAAAACCAATGTAACCAGTATTTTTTTATAGCACATACGATTACCGATCGATCGGAGAGCGAAAGATATAG 172 583603 0.984080487 37 158 1240 0.92519685 2.371067862 0.18503937 0.360465116 0.566929134 172 19 0 235 3L:583507-583705 7 67.5 2691 FBgn0035144 229 9.92 15.31333333 0.294759825 6.804435484 4.407923378 7 7 7 0.1 dme-bantam-3p 6mer3-8 TGATCT 3L 583629 583634 - 3L_583629_583634_- 0.996934095 0.964629276 0.980781685 0.022842943 Kah FBtr0072563 582822 583983 3L - 583435 583745 3'utr Kah FlyBase G33055.2 CACAGCTCGTCGAACAGAAGAGTTCCCTCTTCTCGGAAAACTCCAAGGAAGGCGAGGTCATACACAGTAGATATAGAGAGACAAGGTTGGATCGATTCCCGATTGATCGTTTGATCTTCACTTAGTTGTAATAAGAGACTTCTTAGAGACTTGCCAAGAACAGCGACAAAAAACCAATGTAACCAGTATTTTTTTATAGCACATACGATTACCGATCGATCGGAGAGCGAAAGATATAGCATCCCAGCCCCAGACGATCGAACTCCGCAGCCAAGCTACAAACTTTACACATAGTCATCTAGCTTTATGAT 243 583634 0.983808384 46 227 1793 0.934782609 1.809559715 0.170289855 0.111111111 0.217391304 243 15 3 258 3L:583435-583745 6 Kah FBtr0072563 582822 583983 TGATCT 6mer3-8 dme-bantam-3p 3L - 583507 583705 3'utr Kah FlyBase G25007.1 CTCCAAGGAAGGCGAGGTCATACACAGTAGATATAGAGAGACAAGGTTGGATCGATTCCCGATTGATCGTTTGATCTTCACTTAGTTGTAATAAGAGACTTCTTAGAGACTTGCCAAGAACAGCGACAAAAAACCAATGTAACCAGTATTTTTTTATAGCACATACGATTACCGATCGATCGGAGAGCGAAAGATATAG 172 583605 0.984080487 37 158 1240 0.92519685 2.371067862 0.18503937 0.360465116 0.566929134 172 19 0 235 3L:583507-583705 6 57.5 2692 FBgn0035144 229 9.92 15.31333333 0.251091703 5.796370968 3.754897693 0 -29 -14.5 0.1 dme-miR-184-5p 6mer3-8 TGATAA 3L 583807 583812 - 3L_583807_583812_- 0.458198304 0.460194126 0.459196215 0.001411244 Kah FBtr0072563 582822 583983 3L - 583749 583892 3'utr Kah FlyBase G33056.1 TGCCACTTAATCCAAGTCCTTTCACAGCCCACCAGCCACCACCAATCCAGGACATTTTCTTACTGTAGTCAACGAATATGTGATAATAATGCAAAAGAGCTAAAGTACCATTAGAGAGTAGATGATTCCAGAGCAAAGAGGAGC 148 583816 0.972201018 22 142 839 0.966292135 1.934498451 0.179775281 0.155405405 0.297752809 148 5 1 172 3L:583749-583892 6 Kah FBtr0072563 582822 583983 TGATAA 6mer3-8 dme-miR-184-5p 3L - 583755 583844 3'utr Kah FlyBase G25008.1 AGGACATTTTCTTACTGTAGTCAACGAATATGTGATAATAATGCAAAAGAGCTAAAGTACCATTAGAGAGTAGATGATTCCAGAGCAAAG 80 583816 0.721174301 13 74 436 0.938596491 1.552262523 0.192982456 0.3125 0.51754386 80 5 2 107 3L:583755-583844 6 82 2693 FBgn0035144 229 9.92 15.31333333 0.358078603 8.266129032 5.354810623 4 4 4 0.1 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3L 5928249 5928255 + 3L_5928249_5928255_+ 0.620204027 0.620202547 0.620203287 1.06E-06 Vap-33B FBtr0306383 5926792 5930120 3L + 5928226 5928272 3'utr Vap-33B FlyBase G28311.1 CACCTTTGTCGATTCCGCTCCCATGGTGCTCAAGGAGACCAACATCA 12 5928249 0.967132978 3 12 66 1 1.146128036 0.071428571 0.166666667 0.285714286 12 0 0 14 3L:5928226-5928272 7 Vap-33B FBtr0306383 5926792 5930120 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3L + 5928224 5928263 3'utr Vap-33B FlyBase G21446.1 GTCACCTTTGTCGATTCCGCTCCCATGGTGCTCAAGGAGA 8 5928249 0.816999137 3 8 43 1 0.954242509 0.666666667 0.125 0.222222222 8 0 0 9 3L:5928224-5928263 7 10 2694 FBgn0053523 440.65 33.85333333 51.73666667 0.022693748 0.295391887 0.193286515 0 0 0 0.1 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 5929181 5929186 + 3L_5929181_5929186_+ 0.999990142 0.999991533 0.999990837 9.90E-07 Vap-33B FBtr0306383 5926792 5930120 3L + 5929164 5929231 3'utr Vap-33B FlyBase G28313.1 GTGACGCTGGCGCTGTTGTTCCTGTTGTTTGCCGGCTTCGGCTTTCTGATGTACCAGCAGCTCGGCCA 16 5929180 0.989817243 6 14 141 0.9 0.954242509 0.65 0.125 0.3 16 1 1 18 3L:5929164-5929231 6 Vap-33B FBtr0306383 5926792 5930120 GTTCCT 6mer2-7 dme-miR-276a-3p 3L + 5929164 5929200 3'utr Vap-33B FlyBase G21448.1 GTGACGCTGGCGCTGTTGTTCCTGTTGTTTGCCGGCT 6 5929179 0.945783872 3 6 56 1 0.954242509 0.444444444 0.333333333 0.555555556 6 0 0 9 3L:5929164-5929200 6 9.5 2695 FBgn0053523 440.65 33.85333333 51.73666667 0.02155906 0.280622292 0.183622189 1 2 1.5 0.1 dme-miR-965-3p 8mer-A1 TACGCTTA 3L 5930509 5930516 - 3L_5930509_5930516_- 0.625361356 0.625363195 0.625362275 1.27E-06 Rcc1 FBtr0077076|FBtr0077075|FBtr0077074 5930260|5930260|5930260 5930578|5930578|5930578 3L - 5930489 5930531 3'utr Rcc1 FlyBase G34677.2 TAAGTTACGAACCCGTACGCTTACCCTACGCTTAAGGAAGGCA 56 5930516 0.964751403 4 54 225 0.974025974 1.574031268 0.038961039 0.321428571 0.506493506 56 1 1 75 3L:5930489-5930531 8 Rcc1 FBtr0077076|FBtr0077075|FBtr0077074 5930260|5930260|5930260 5930578|5930578|5930578 TACGCTTA 8mer-A1 dme-miR-965-3p 3L - 5930446 5930530 3'utr Rcc1 FlyBase G26227.1 AAGTTACGAACCCGTACGCTTACCCTACGCTTAAGGAAGGCAATGAGTAGCCCAGATTCGTAAGATAGATCGGAAATTTTGCTTA 55 5930516 0.963896102 8 53 212 0.962025316 1.880813592 0.063291139 0.381818182 0.569620253 55 3 0 76 3L:5930446-5930530 8 53 2696 FBgn0002638 1072.403333 62.51333333 96.14666667 0.049421704 0.847819132 0.551241159 0 0 0 0.1 dme-miR-965-3p 6mer3-8 TACGCT 3L 5930560 5930565 - 3L_5930560_5930565_- 0.999999882 0.999997994 0.999998938 1.34E-06 Rcc1 FBtr0077076|FBtr0077075|FBtr0077074 5930260|5930260|5930260 5930578|5930578|5930578 3L - 5930537 5930602 stop_codon Rcc1 FlyBase G34678.1 AAGCGGGGCGGTAAAAAGACATAAGATTGAGTATAAATACGCTGACTTTCCCACTTTGTTTTTGGT 28 5930565 0.949735432 7 26 167 0.939393939 1.491361694 0.454545455 0.178571429 0.303030303 28 2 0 31 3L:5930537-5930602 6 Rcc1 FBtr0077076|FBtr0077075|FBtr0077074 5930260|5930260|5930260 5930578|5930578|5930578 TACGCT 6mer3-8 dme-miR-965-3p 3L - 5930546 5930601 stop_codon Rcc1 FlyBase G26228.1 AGCGGGGCGGTAAAAAGACATAAGATTGAGTATAAATACGCTGACTTTCCCACTTT 25 5930565 0.837341976 6 21 143 0.888888889 1.505149978 0.555555556 0.36 0.555555556 25 4 0 32 3L:5930546-5930601 6 19 2697 FBgn0002638 1072.403333 62.51333333 96.14666667 0.017717215 0.30393516 0.197614755 0 0 0 0.1 dme-miR-277-3p 6mer2-7 GCATTT 3L 6096315 6096320 + 3L_6096315_6096320_+ 0.886024404 0.841226579 0.863625491 0.031676828 loj FBtr0301446|FBtr0301447|FBtr0301448 6096261|6096261|6096261 6096517|6096517|6096517 3L + 6096269 6096358 3'utr loj FlyBase G28325.1 AAGATACTTTTCAAAGACTTCGCAACATGTTTCTAAAATTCCATCCGCATTTCCAAGACATTCATTCTATTCTACCTGCTGAATGAGTTT 161 6096307 0.839041418 8 157 1311 0.978947368 1.792391689 0.015789474 0.136645963 0.268421053 161 2 2 186 3L:6096269-6096358 6 loj FBtr0301447|FBtr0301448|FBtr0301446 6096261|6096261|6096261 6096517|6096517|6096517 GCATTT 6mer2-7 dme-miR-277-3p 3L + 6096274 6096351 3'utr loj FlyBase G21455.1 ACTTTTCAAAGACTTCGCAACATGTTTCTAAAATTCCATCCGCATTTCCAAGACATTCATTCTATTCTACCTGCTGAA 103 6096307 0.964130329 10 102 802 0.993006993 2.152288344 0.020979021 0.262135922 0.468531469 103 1 0 142 3L:6096274-6096351 6 122 2698 FBgn0061492 141.6666667 16.32666667 25.11333333 0.861176471 7.47243773 4.85797717 8 8 8 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 6096463 6096469 + 3L_6096463_6096469_+ 0.80042223 0.800175267 0.800298748 0.000174585 loj FBtr0301446|FBtr0301446|FBtr0301446|FBtr0301447|FBtr0301447|FBtr0301447|FBtr0301448|FBtr0301448|FBtr0301448 6096261|6096261|6096261|6096261|6096261|6096261|6096261|6096261|6096261 6096517|6096517|6096517|6096517|6096517|6096517|6096517|6096517|6096517 3L + 6096368 6096486 3'utr loj FlyBase G28326.1 ATTTTATCACTGGCTAATTGATCAAGCGCAACTGAGCAGACTTTTTTATAATTGGGACTACTTATGTCATACGAGTTATAGACAGCAAAACTTATTGTGATAAGTGTACATTTGTGTGT 291 6096461 0.983343739 20 277 2110 0.95923913 1.50638202 0.41576087 0.223367698 0.385869565 291 5 10 353 3L:6096368-6096486 7 loj FBtr0301447|FBtr0301447|FBtr0301447|FBtr0301448|FBtr0301448|FBtr0301448|FBtr0301446|FBtr0301446|FBtr0301446 6096261|6096261|6096261|6096261|6096261|6096261|6096261|6096261|6096261 6096517|6096517|6096517|6096517|6096517|6096517|6096517|6096517|6096517 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 6096386 6096480 3'utr loj FlyBase G21456.1 TGATCAAGCGCAACTGAGCAGACTTTTTTATAATTGGGACTACTTATGTCATACGAGTTATAGACAGCAAAACTTATTGTGATAAGTGTACATTT 197 6096461 0.771146132 16 181 1386 0.935153584 1.437750563 0.464163823 0.370558376 0.576791809 197 10 9 274 3L:6096386-6096480 7 144.5 2699 FBgn0061492 141.6666667 16.32666667 25.11333333 1.02 8.850551245 5.753915583 2 2 2 0.1 dme-miR-12-5p 7mer-m8 AATACTC 3L 6169335 6169341 - 3L_6169335_6169341_- 0.617347998 0.674505336 0.645926667 0.040416314 CG10289 FBtr0331790|FBtr0077019 6164914|6167311 6169800|6169800 3L - 6169256 6169403 3'utr CG10289 FlyBase G34702.1 AAGAAAACTGTATTTTGTTTGTAATATGTATTAGTCTGTCGATTTAGTACGCTTTTACTTTCAATACTCTCAATGTGTTAGGCAACCTATGAGCATTACTTAAAGTACCAAAATTCACGCAACGTTTAGAATGCTTAGTTTATATTTG 47 6169348 0.98962322 17 43 418 0.909090909 1.397940009 0.181818182 0.14893617 0.272727273 47 4 1 50 3L:6169256-6169403 7 CG10289 FBtr0077019|FBtr0331790 6167311|6164914 6169800|6169800 AATACTC 7mer-m8 dme-miR-12-5p 3L - 6169302 6169366 3'utr CG10289 FlyBase G26239.1 GTCGATTTAGTACGCTTTTACTTTCAATACTCTCAATGTGTTAGGCAACCTATGAGCATTACTTA 14 6169339 0.988631932 5 10 124 0.8 1 0.4 0.428571429 0.68 14 4 1 20 3L:6169302-6169366 7 13.5 2700 FBgn0035688 1894.98 44.00666667 67.31 0.007124086 0.306771701 0.200564552 7 -2 2.5 0.1 dme-miR-995-5p 6mer3-8 AATTCG 3L 6178832 6178837 - 3L_6178832_6178837_- 0.970913497 0.978615639 0.974764568 0.005446207 CG10274 FBtr0113149 6178675 6179056 3L - 6178810 6178862 3'utr CG10274 FlyBase G34722.1 CAGGAGAACACAGAATACCTATGTGAATTCGACTTAAGTTTAATGATTCTGGT 26 6178835 0.971570844 4 24 144 0.942857143 1.041392685 0.171428571 0.269230769 0.457142857 26 0 2 33 3L:6178810-6178862 6 CG10274 FBtr0113149 6178675 6179056 AATTCG 6mer3-8 dme-miR-995-5p 3L - 6178821 6178861 3'utr CG10274 FlyBase G26257.2 AGGAGAACACAGAATACCTATGTGAATTCGACTTAAGTTTA 15 6178836 0.975184735 3 12 76 0.842105263 0.602059991 0.052631579 0.266666667 0.421052632 15 0 3 16 3L:6178821-6178861 6 16.5 2701 FBgn0035690 331.03 13.22333333 20.28333333 0.049844425 1.247794303 0.81347576 -2 -1 -1.5 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 6178851 6178857 + 3L_6178851_6178857_+ 0.660604277 0.661615645 0.661109961 0.000715097 CG7376 FBtr0331788 6178643 6178941 3L + 6178828 6178883 3'utr CG7376 FlyBase G28336.1 AAGTCGAATTCACATAGGTATTCTGTGTTCTCCTGAATAATGTACAGTATTATTTG 7 6178854 0.984311664 5 7 64 1 1.041392685 0.454545455 0.428571429 0.636363636 7 0 0 11 3L:6178828-6178883 7 CG7376 FBtr0331788 6178643 6178941 TGTGTTC 7mer-m8 dme-miR-317-3p 3L + 6178833 6178883 3'utr CG7376 FlyBase G21459.1 GAATTCACATAGGTATTCTGTGTTCTCCTGAATAATGTACAGTATTATTTG 7 6178848 0.990218748 6 7 68 1 1.041392685 0.363636364 0.428571429 0.636363636 7 0 0 11 3L:6178833-6178883 7 5.5 2702 FBgn0035689 292.97 8.566666667 13.15333333 0.018773253 0.642023346 0.418144957 -3 3 0 0.1 dme-miR-283-5p 6mer3-8 TGATAT 3L 6178942 6178947 - 3L_6178942_6178947_- 0.999999851 0.999999953 0.999999902 7.07E-08 CG10274 FBtr0113149 6178675 6179056 3L - 6178930 6178971 3'utr CG10274 FlyBase G34724.1 AGAACAGTGTGTGTAAGATGGATATGATATAGTTTTAAGCTG 9 6178952 0.885437843 4 8 76 1 1.176091259 0.4 0.222222222 0.533333333 9 0 0 15 3L:6178930-6178971 6 CG10274 FBtr0113149 6178675 6179056 TGATAT 6mer3-8 dme-miR-283-5p 3L - 6178927 6178966 3'utr CG10274 FlyBase G26258.1 AGTGTGTGTAAGATGGATATGATATAGTTTTAAGCTGAAA 10 6178953 0.880486114 5 9 81 1 1.176091259 0.266666667 0.4 0.6 10 0 0 15 3L:6178927-6178966 6 8.5 2703 FBgn0035690 331.03 13.22333333 20.28333333 0.025677431 0.642803126 0.41906327 5 6 5.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 3L 6182276 6182281 - 3L_6182276_6182281_- 0.999998178 0.999997336 0.999997757 6.36E-07 D19B FBtr0077017 6182174 6182416 3L - 6182243 6182307 3'utr D19B FlyBase G34732.1 CAACTAGTTTTCGTCACTTTGCAATTTGATCTTTTTTGTATTTAAATCCCCCCTTTAAACTGCTT 55 6182282 0.791990291 12 53 692 0.96969697 1.806179974 0.121212121 0.181818182 0.318181818 55 2 0 64 3L:6182243-6182307 6 D19B FBtr0077017 6182174 6182416 TGATCT 6mer3-8 dme-bantam-3p 3L - 6182234 6182299 3'utr D19B FlyBase G26262.1 TTTCGTCACTTTGCAATTTGATCTTTTTTGTATTTAAATCCCCCCTTTAAACTGCTTAAGTTTGTA 39 6182282 0.988137582 9 36 452 0.942307692 1.69019608 0.019230769 0.282051282 0.461538462 39 3 0 49 3L:6182234-6182299 6 41 2704 FBgn0022699 264.21 11.84 18.04333333 0.155179592 3.462837838 2.272307408 1 1 1 0.1 dme-miR-318-3p 7mer-A1 CCAGTGA 3L 6186016 6186022 - 3L_6186016_6186022_- 0.822194654 0.823345188 0.822769921 0.000813526 D19A FBtr0077016 6185828 6186380 3L - 6186000 6186031 3'utr D19A FlyBase G34742.1 TTTGCAATACCAGTGATTTTTACAAATATATT 6 6186014 0.928917111 3 6 48 1 1.079181246 0.25 0.833333333 0.916666667 6 0 0 12 3L:6186000-6186031 7 D19A FBtr0077016 6185828 6186380 CCAGTGA 7mer-A1 dme-miR-318-3p 3L - 6185998 6186033 3'utr D19A FlyBase G26266.1 ACTTTGCAATACCAGTGATTTTTACAAATATATTTT 8 6186013 0.986024159 3 6 64 0.8 0.602059991 0.2 0.25 0.4 8 1 1 8 3L:6185998-6186033 7 7 2705 FBgn0022935 233.1233333 8.756666667 13.45 0.030027024 0.79939094 0.520446097 -8 -9 -8.5 0.1 dme-miR-33-5p 7mer-m8 CAATGCA 3L 6186303 6186309 - 3L_6186303_6186309_- 0.661022755 0.656173009 0.658597882 0.003429326 D19A FBtr0077016 6185828 6186380 3L - 6186221 6186409 stop_codon D19A FlyBase G34743.1 TGGATGCCCTGAAGATCGACCACGTCTAGGCAGCAGGATTGGCTTTACTTTACTAGCATATATGCATCATAACCTAGCCACATCCATATGTATCCACTTCCAATGCAGCTGACACTGTCCGGAAAAGTTGTAGGCATGCCTCGAATTGCTCTCTAGCTGGATCAGATTGTAGGTTTATAGGCACTCCAG 89 6186306 0.975116679 19 88 566 0.990566038 2.021189299 0.141509434 0.168539326 0.301886792 89 1 0 105 3L:6186221-6186409 7 D19A FBtr0077016 6185828 6186380 CAATGCA 7mer-m8 dme-miR-33-5p 3L - 6186220 6186322 3'utr D19A FlyBase G26267.1 ATGTATCCACTTCCAATGCAGCTGACACTGTCCGGAAAAGTTGTAGGCATGCCTCGAATTGCTCTCTAGCTGGATCAGATTGTAGGTTTATAGGCACTCCAGA 39 6186306 0.927633539 10 38 257 0.983606557 1.77815125 0.213114754 0.435897436 0.639344262 39 1 0 60 3L:6186220-6186322 7 29 2706 FBgn0022935 233.1233333 8.756666667 13.45 0.124397672 3.311762467 2.156133829 -3 -3 -3 0.1 dme-miR-970-3p 6mer2-7 CTTATG 3L 6192360 6192365 - 3L_6192360_6192365_- 0.99259124 0.92246423 0.957527735 0.049587277 CG13298 FBtr0077015 6192122 6192480 3L - 6192342 6192386 3'utr CG13298 FlyBase G34750.1 TTTAGGGAACTTCTTGCTCTGCTTATGTGTATACCAAATTTTTGC 17 6192364 0.973666618 5 16 148 1 1.301029996 0.1 0.176470588 0.3 17 0 0 20 3L:6192342-6192386 6 CG13298 FBtr0077015 6192122 6192480 CTTATG 6mer2-7 dme-miR-970-3p 3L - 6192347 6192387 3'utr CG13298 FlyBase G26271.1 GTTTAGGGAACTTCTTGCTCTGCTTATGTGTATACCAAATT 11 6192364 0.596580178 6 11 102 1 1.230448921 0.058823529 0.272727273 0.529411765 11 0 0 17 3L:6192347-6192387 6 13 2707 FBgn0035692 547.6666667 75.45333333 115.9233333 0.023737066 0.172291924 0.112143083 -1 -1 -1 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 6198119 6198125 + 3L_6198119_6198125_+ 0.661615578 0.661615559 0.661615568 0 Trn FBtr0077001|FBtr0333059|FBtr0077002|FBtr0077000 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 3L + 6198007 6198175 3'utr Trn FlyBase G28355.1 AAGCTAGAGGATCTTTGATCTGTAGAACCTCTTTAGGCACACGACTGTCCGCTTACAGCATATAAAATGCCTTTCTTGTGCAGAAAACTTAGTAGGAACCACTAGAAAATTATGTGTTCCGGCCGTACTTAACCGGAGTCAGTGCTATAGCAGATATGCCCCATTCTCC 36 6198117 0.941499819 14 34 234 0.976190476 1.612783857 0.166666667 0.138888889 0.261904762 36 1 0 41 3L:6198007-6198175 7 Trn FBtr0077002|FBtr0077000|FBtr0077001|FBtr0333059 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 TGTGTTC 7mer-m8 dme-miR-317-3p 3L + 6198100 6198133 3'utr Trn FlyBase G21469.1 AGGAACCACTAGAAAATTATGTGTTCCGGCCGTA 7 6198116 0.781381192 2 7 40 1 0.954242509 0.555555556 0.285714286 0.444444444 7 0 0 9 3L:6198100-6198133 7 11.5 2708 FBgn0024921 2762.84 61.57666667 94.85333333 0.004162384 0.186759054 0.121239809 2 3 2.5 0.1 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 6198441 6198448 + 3L_6198441_6198448_+ 0.639994381 0.643565469 0.641779925 0.002525149 Trn FBtr0077001|FBtr0333059|FBtr0077002|FBtr0077000 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 3L + 6198398 6198457 3'utr Trn FlyBase G28356.1 GGATTCAATGGCAGGTGCACACAAAATTGTTACAAATCAAACAAAGACTGATGTTCAACT 10 6198450 0.940774064 5 10 43 1 1.176091259 0 0.5 0.666666667 10 0 0 15 3L:6198398-6198457 8 Trn FBtr0077002|FBtr0077000|FBtr0077001|FBtr0333059 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 AAGACTGA 8mer-A1 dme-miR-14-3p 3L + 6198429 6198457 3'utr Trn FlyBase G21470.1 ACAAATCAAACAAAGACTGATGTTCAACT 9 6198449 0.777188964 2 7 40 0.8 0.602059991 0 0.111111111 0.2 9 1 1 8 3L:6198429-6198457 8 8.5 2709 FBgn0024921 2762.84 61.57666667 94.85333333 0.003076544 0.138039301 0.089612033 -9 -8 -8.5 0.1 dme-miR-304-5p 8mer-A1 TGAGATTA 3L 6198831 6198838 + 3L_6198831_6198838_+ 0.625363332 0.625361551 0.625362441 1.20E-06 Trn FBtr0077001|FBtr0333059|FBtr0077002|FBtr0077000 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 3L + 6198812 6198849 3'utr Trn FlyBase G28359.1 TAGGGAAACATTGTAAAATTGAGATTAGGATTTTGTTG 19 6198830 0.795807157 6 18 138 0.961538462 1.397940009 0.115384615 0.368421053 0.538461538 19 1 0 25 3L:6198812-6198849 8 Trn FBtr0077002|FBtr0077000|FBtr0077001|FBtr0333059 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 TGAGATTA 8mer-A1 dme-miR-304-5p 3L + 6198809 6198859 3'utr Trn FlyBase G21473.1 AAATAGGGAAACATTGTAAAATTGAGATTAGGATTTTGTTGAATATCTTAT 17 6198830 0.969663796 4 16 137 0.966666667 1.462397998 0.2 0.411764706 0.666666667 17 1 0 29 3L:6198809-6198859 8 18 2710 FBgn0024921 2762.84 61.57666667 94.85333333 0.006515035 0.292318519 0.189766657 1 1 1 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 3L 6198893 6198898 + 3L_6198893_6198898_+ 0.999971552 0.999939616 0.999955584 2.26E-05 Trn FBtr0077001|FBtr0333059|FBtr0077002|FBtr0077000 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 3L + 6198865 6198920 3'utr Trn FlyBase G28360.1 TTCCATTAACTGAATACAAAAGCAACCATTGACTGATCACTTTTTAAAGTATTATT 137 6198893 0.829518982 9 131 540 0.955307263 1.278753601 0 0.233576642 0.413407821 137 0 8 171 3L:6198865-6198920 6 Trn FBtr0077002|FBtr0077000|FBtr0077001|FBtr0333059 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 TTGACT 6mer3-8 dme-miR-1012-3p 3L + 6198862 6198972 3'utr Trn FlyBase G21474.1 ATTTTCCATTAACTGAATACAAAAGCAACCATTGACTGATCACTTTTTAAAGTATTATTATATAATTTTTTTTTGTATAGGGACAAGTGTAATTAATGAACTATTATTATT 130 6198893 0.916817379 13 126 530 0.978947368 2.269512944 0.031578947 0.315384615 0.531578947 130 4 0 186 3L:6198862-6198972 6 127 2711 FBgn0024921 2762.84 61.57666667 94.85333333 0.045967193 2.06246955 1.338909193 0 0 0 0.1 dme-miR-968-5p 6mer3-8 ACTACT 3L 6199085 6199090 + 3L_6199085_6199090_+ 0.993189631 0.994395899 0.993792765 0.000852983 Trn FBtr0077001|FBtr0333059|FBtr0077002|FBtr0077000 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 3L + 6199060 6199126 3'utr Trn FlyBase G28362.1 AATTATATGATTAGGTGTAAAGTGTACTACTAAATGAAAACAAAAGTCTTTGAAATTGTCGCGGAAC 138 6199082 0.820391054 4 137 873 0.993939394 2.214843848 0.381818182 0.18115942 0.315151515 138 1 0 164 3L:6199060-6199126 6 Trn FBtr0077002|FBtr0077000|FBtr0077001|FBtr0333059 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 ACTACT 6mer3-8 dme-miR-968-5p 3L + 6199060 6199127 3'utr Trn FlyBase G21475.1 AATTATATGATTAGGTGTAAAGTGTACTACTAAATGAAAACAAAAGTCTTTGAAATTGTCGCGGAACA 113 6199082 0.793437155 5 112 681 0.993548387 2.187520721 0.451612903 0.274336283 0.470967742 113 1 0 154 3L:6199060-6199127 6 96 2712 FBgn0024921 2762.84 61.57666667 94.85333333 0.034746855 1.559032101 1.012088839 3 3 3 0.1 dme-miR-304-5p 7mer-A1 GAGATTA 3L 6486510 6486516 - 3L_6486510_6486516_- 0.823349528 0.823344283 0.823346905 3.68E-06 CG10147 FBtr0333060 6486165 6486934 3L - 6486483 6486522 3'utr CG10147 FlyBase G34827.1 CAAGAAGAGATTATGAATGGAGACAATAACCCTTAATAAC 5 6486507 0.81015869 4 5 19 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 3L:6486483-6486522 7 CG10147 FBtr0333060 6486165 6486934 GAGATTA 7mer-A1 dme-miR-304-5p 3L - 6486482 6486521 3'utr CG10147 FlyBase G26353.1 AAGAAGAGATTATGAATGGAGACAATAACCCTTAATAACA 6 6486508 0.91971515 4 6 22 1 0.77815125 0 0 0 6 0 0 6 3L:6486482-6486521 7 4.5 2713 FBgn0035702 164.6666667 9.066666667 13.86666667 0.027327935 0.496323529 0.324519231 -9 -8 -8.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3L 6486769 6486774 - 3L_6486769_6486774_- 0.992798187 0.99997191 0.996385048 0.005072572 CG10147 FBtr0333060|FBtr0076987 6486165|6486595 6486934|6486934 3L - 6486730 6486787 3'utr CG10147 FlyBase G34828.1 AATTTTTAATAAACTAGTCTTAGTTTCTAATGGCACAAATACATGCCATTTTACCCTT 24 6486768 0.748387282 5 21 251 0.884615385 1.06069784 0.038461538 0.083333333 0.153846154 24 2 1 23 3L:6486730-6486787 6 CG10147 FBtr0076987|FBtr0333060 6486595|6486165 6486934|6486934 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3L - 6486730 6486784 3'utr CG10147 FlyBase G26354.1 TTTTAATAAACTAGTCTTAGTTTCTAATGGCACAAATACATGCCATTTTACCCTT 17 6486767 0.755058102 7 17 162 1 1.397940009 0 0.352941176 0.56 17 0 0 25 3L:6486730-6486784 6 16 2714 FBgn0035702 164.6666667 9.066666667 13.86666667 0.097165992 1.764705882 1.153846154 -6 -7 -6.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 651643 651649 - 3L_651643_651649_- 0.752395788 0.779464303 0.765930045 0.01914032 CG3402 FBtr0072559|FBtr0072559|FBtr0072559 651540|651540|651540 652087|652087|652087 3L - 651556 651697 3'utr CG3402 FlyBase G33073.1 AGCCGAACGCAGAGTTGTTGAAAGAAACATACATTCATAGTACATACTTGTGATAAATGACTTTAACTGTGCAGATATGTGCGAAGAAGGCGCATCACTTAAGTTTAAAATTGAGTTTTTAATGTTATATTGCATTTGAATA 219 651650 0.984923939 18 198 1606 0.896296296 1.383815366 0.103703704 0.168949772 0.325925926 219 19 9 242 3L:651556-651697 7 CG3402 FBtr0072559|FBtr0072559|FBtr0072559 651540|651540|651540 652087|652087|652087 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 651593 651675 3'utr CG3402 FlyBase G25015.1 AGAAACATACATTCATAGTACATACTTGTGATAAATGACTTTAACTGTGCAGATATGTGCGAAGAAGGCGCATCACTTAAGTT 158 651650 0.879725045 11 140 1146 0.87398374 1.101989539 0.166666667 0.411392405 0.62195122 158 15 16 215 3L:651593-651675 7 176 2715 FBgn0035148 1763.92 212.3 323.94 0.099777768 0.829015544 0.54331049 1 1 1 0.1 dme-bantam-3p 6mer2-7 GATCTC 3L 651996 652001 - 3L_651996_652001_- 0.904446459 0.930290869 0.917368664 0.01827475 CG3402 FBtr0072559 651540 652087 3L - 651944 652165 stop_codon CG3402 FlyBase G33075.1 AAAAAGGCCGTGAGCTACATCCGGAAAAACCCGATACTCAACATGCTGGTGGCCCGCAAGGGCGTGACCTCCACATAAGTGGTGCTCGGAGCAGGGTCTCCACAGACTACAGCAGTATTTAAGCGGCATTTAAACTATCCCCTCCACCGCCCCTCTGGGCTACGGATCTCTTTGCCTCCTGCAACCTATGCGAATACTTAGAACTACCATATTATACATATT 1240 651994 0.990396268 33 1207 8153 0.975703325 2.037426498 0.214194373 0.211290323 0.374680307 1240 25 13 1526 3L:651944-652165 6 CG3402 FBtr0072559 651540 652087 GATCTC 6mer2-7 dme-bantam-3p 3L - 651947 652145 stop_codon CG3402 FlyBase G25017.1 CCGGAAAAACCCGATACTCAACATGCTGGTGGCCCGCAAGGGCGTGACCTCCACATAAGTGGTGCTCGGAGCAGGGTCTCCACAGACTACAGCAGTATTTAAGCGGCATTTAAACTATCCCCTCCACCGCCCCTCTGGGCTACGGATCTCTTTGCCTCCTGCAACCTATGCGAATACTTAGAACTACCATATTATACAT 868 651994 0.960498098 34 848 5864 0.979907264 2.061726568 0.192426584 0.373271889 0.579598145 868 16 10 1268 3L:651947-652145 6 844 2716 FBgn0035148 1763.92 212.3 323.94 0.47847975 3.975506359 2.605420757 -7 -7 -7 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 6549759 6549764 + 3L_6549759_6549764_+ 0.999732122 0.998883676 0.999307899 0.000599909 sfl FBtr0076968|FBtr0301562 6548788|6548788 6550104|6550104 3L + 6549746 6549793 3'utr sfl FlyBase G28377.1 CAGAAACTTCTGTGTACCTTAAGCATTTCAAATCCATGCCACGACTGT 7 6549758 0.978295849 3 7 44 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 3L:6549746-6549793 6 sfl FBtr0076968|FBtr0301562 6548788|6548788 6550104|6550104 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 6549741 6549810 3'utr sfl FlyBase G21483.1 AGCCACAGAAACTTCTGTGTACCTTAAGCATTTCAAATCCATGCCACGACTGTGACTTTGTTCCAGCAGT 11 6549757 0.937116701 6 11 69 1 1.146128036 0.071428571 0.272727273 0.428571429 11 0 0 14 3L:6549741-6549810 6 5.5 2717 FBgn0020251 430.2866667 9.026666667 13.86333333 0.012782176 0.609305761 0.396729983 1 2 1.5 0.1 dme-miR-986-5p 7mer-m8 ATTCGAG 3L 657921 657927 + 3L_657921_657927_+ 0.565172283 0.548699309 0.556935796 0.01164817 Rev1 FBtr0072557 657793 657971 3L + 657848 657957 3'utr Rev1 FlyBase G26877.1 TAATGTAACGCCAAGCTATGAATGCGGCCAGCTGATAATGTTAATGAGCCATTAGTTTATAAGCCATCCATTAATTCGAGCCAAAAATAAAACATTCTGGTAAAGAAAAT 60 657921 0.982377421 15 47 355 0.763157895 1.161368002 0.065789474 0.166666667 0.342105263 60 15 3 58 3L:657848-657957 7 Rev1 FBtr0072557 657793 657971 ATTCGAG 7mer-m8 dme-miR-986-5p 3L + 657841 657938 3'utr Rev1 FlyBase G20338.1 ATTATAATAATGTAACGCCAAGCTATGAATGCGGCCAGCTGATAATGTTAATGAGCCATTAGTTTATAAGCCATCCATTAATTCGAGCCAAAAATAAA 42 657920 0.980466558 13 34 240 0.828125 1.72427587 0.078125 0.380952381 0.59375 42 11 0 53 3L:657841-657938 7 23.5 2718 FBgn0035150 1798.706667 67.56666667 104.0266667 0.013064943 0.347804637 0.225903614 0 1 0.5 0.1 dme-miR-34-5p 6mer3-8 CACTGC 3L 6689797 6689802 - 3L_6689797_6689802_- 1 1 1 0 SP1173 FBtr0076960|FBtr0076959|FBtr0076961|FBtr0076958 6689697|6689325|6689325|6689325 6689965|6689965|6689965|6689965 3L - 6689780 6689812 3'utr SP1173 FlyBase G34844.1 TTGAGGGCAACACTGCTAATAGTTTGTAATGCG 6 6689796 0.797776776 2 6 37 1 0.903089987 0 0.333333333 0.5 6 0 0 8 3L:6689780-6689812 6 SP1173 FBtr0076961|FBtr0076958|FBtr0076960|FBtr0076959 6689325|6689325|6689697|6689325 6689965|6689965|6689965|6689965 CACTGC 6mer3-8 dme-miR-34-5p 3L - 6689714 6689811 3'utr SP1173 FlyBase G26364.1 TGAGGGCAACACTGCTAATAGTTTGTAATGCGTATTTTTGCTAAGTGTATACACCAGGAGGATGAAAAGCAAAGGAGTGGAGACGATTAAAACAAAAA 9 6689796 0.980786037 7 9 66 1 1.113943352 0.307692308 0.333333333 0.538461538 9 0 0 13 3L:6689714-6689811 6 4.5 2719 FBgn0035710 0.666666667 0.03 0.043333333 6.75 150 103.8461538 -6 -6 -6 0.1 dme-miR-283-5p 7mer-m8 TGATATT 3L 6689873 6689879 - 3L_6689873_6689879_- 0.620203673 0.620203677 0.620203675 0 SP1173 FBtr0076960|FBtr0076959|FBtr0076961|FBtr0076958 6689697|6689325|6689325|6689325 6689965|6689965|6689965|6689965 3L - 6689828 6689892 3'utr SP1173 FlyBase G34845.1 AATCGAGTGCGAATGATATTCTTAGTTTTTAAATGTGTACACCACGCCTCGTCCTCCTCCACCTA 17 6689871 0.988633972 7 16 151 1 1.230448921 0.352941176 0 0 17 0 0 17 3L:6689828-6689892 7 SP1173 FBtr0076961|FBtr0076958|FBtr0076960|FBtr0076959 6689325|6689325|6689697|6689325 6689965|6689965|6689965|6689965 TGATATT 7mer-m8 dme-miR-283-5p 3L - 6689853 6689894 3'utr SP1173 FlyBase G26365.1 CAAATCGAGTGCGAATGATATTCTTAGTTTTTAAATGTGTAC 12 6689871 0.724554945 4 11 130 0.928571429 0.812913357 0.642857143 0.166666667 0.285714286 12 0 1 13 3L:6689853-6689894 7 12 2720 FBgn0035710 0.666666667 0.03 0.043333333 18 400 276.9230769 -8 -8 -8 0.1 dme-miR-33-5p 7mer-A1 AATGCAA 3L 6729690 6729696 - 3L_6729690_6729696_- 0.781247097 0.782878325 0.782062711 0.001153433 dikar FBtr0303750|FBtr0333047 6728798|6728798 6730470|6730470 3L - 6729618 6729718 3'utr dikar FlyBase G34857.1 AAGCAGAAAACGAAAGAGAAATAATGCAAAAATTCAAAGAATTACTCTCAAGCCCCCCCTGACTATAATTAGATTTTAGTTTTTTCCAGAACCTAACTCGT 58 6729677 0.982134983 8 53 263 0.936507937 1.770852012 0.111111111 0.051724138 0.126984127 58 4 0 59 3L:6729618-6729718 7 dikar FBtr0333047|FBtr0303750 6728798|6728798 6730470|6730470 AATGCAA 7mer-A1 dme-miR-33-5p 3L - 6729598 6729711 3'utr dikar FlyBase G26371.1 AAACGAAAGAGAAATAATGCAAAAATTCAAAGAATTACTCTCAAGCCCCCCCTGACTATAATTAGATTTTAGTTTTTTCCAGAACCTAACTCGTAACTATAGAACTCGTGTAAA 24 6729677 0.961125274 10 22 112 0.9375 1.176091259 0.03125 0.291666667 0.46875 24 1 1 30 3L:6729598-6729711 7 12.5 2721 FBgn0261934 1905.406667 25.77666667 39.66 0.006560279 0.484934695 0.315179022 -19 -19 -19 0.1 dme-bantam-3p 7mer-A1 GATCTCA 3L 6739185 6739191 - 3L_6739185_6739191_- 0.823346736 0.823344 0.823345368 1.91E-06 dikar FBtr0303751 6738526 6740644 3L - 6739164 6739201 5'utr dikar FlyBase G34866.1 AAGTATTGCCGATCTCAGTCTGCCCTCGCCGGTGGCAC 15 6739183 0.721318932 4 15 101 1 1.230448921 0.176470588 0.133333333 0.235294118 15 0 0 17 3L:6739164-6739201 7 dikar FBtr0303751 6738526 6740644 GATCTCA 7mer-A1 dme-bantam-3p 3L - 6739164 6739201 5'utr dikar FlyBase G26378.1 AAGTATTGCCGATCTCAGTCTGCCCTCGCCGGTGGCAC 8 6739182 0.656678179 6 8 55 1 1.041392685 0.090909091 0.25 0.454545455 8 0 0 11 3L:6739164-6739201 7 11.5 2722 FBgn0261934 1905.406667 25.77666667 39.66 0.006035457 0.44613992 0.2899647 -8 -9 -8.5 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 3L 6744486 6744491 - 3L_6744486_6744491_- 0.543251319 0.522230378 0.532740848 0.014864021 velo FBtr0076950|FBtr0076951|FBtr0076952|FBtr0345025 6744424|6744424|6744424|6744424 6744638|6744638|6744638|6744638 3L - 6744432 6744525 3'utr velo FlyBase G34870.1 TACATCGGTTATTCAATTCTATGTATCTAAACGTTTGACTCTAAAAAACTACACTAAACTAAAACTATAAATAAAGACTAAATTACTATGTATG 58 6744491 0.744957535 12 53 399 0.941176471 1.505149978 0.073529412 0.137931034 0.264705882 58 3 1 64 3L:6744432-6744525 6 velo FBtr0076950|FBtr0076951|FBtr0076952|FBtr0345025 6744424|6744424|6744424|6744424 6744638|6744638|6744638|6744638 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 6744474 6744525 3'utr velo FlyBase G26381.1 TACATCGGTTATTCAATTCTATGTATCTAAACGTTTGACTCTAAAAAACTAC 22 6744491 0.755451996 5 22 160 1 1.431363764 0 0.181818182 0.333333333 22 0 0 27 3L:6744474-6744525 6 23.5 2723 FBgn0035713 1469.223333 41.72 63.81666667 0.015994845 0.563279003 0.368242361 0 0 0 0.1 dme-bantam-3p 6mer3-8 TGATCT 3L 691988 691993 - 3L_691988_691993_- 0.999946404 0.999831114 0.999888759 8.15E-05 Vti1 FBtr0072607 691484 692021 3L - 691947 692018 3'utr Vti1 FlyBase G33100.1 TTTTAGCTAGCAAACCAATAGCCAATGATCTTAGCCCAAATTCAAATGTTATAGAAGCCTGTCCATTCCAAT 46 691993 0.851656532 9 45 220 0.982758621 1.755874856 0.051724138 0.260869565 0.413793103 46 1 0 57 3L:691947-692018 6 Vti1 FBtr0072607 691484 692021 TGATCT 6mer3-8 dme-bantam-3p 3L - 691950 692007 3'utr Vti1 FlyBase G25043.1 AAACCAATAGCCAATGATCTTAGCCCAAATTCAAATGTTATAGAAGCCTGTCCATTCC 39 691993 0.858704861 7 38 200 0.980392157 1.698970004 0.098039216 0.282051282 0.450980392 39 1 0 50 3L:691950-692007 6 34.5 2724 FBgn0260862 79.26 7.14 10.99 0.435276306 4.831932773 3.13921747 0 0 0 0.1 dme-miR-277-3p 7mer-A1 GCATTTA 3L 6949947 6949953 - 3L_6949947_6949953_- 0.760275987 0.823349562 0.791812775 0.04459977 CG10077 FBtr0333083|FBtr0076940 6949489|6949489 6950329|6950329 3L - 6949912 6949975 3'utr CG10077 FlyBase G34894.1 GTGCCGATCATCGATGTTGTTGGCATTTATCTTTCCAGAGCCCTGGGCGTATTTGATTTCTTTA 7 6949943 0.987098377 6 7 62 1 0.84509804 0.285714286 0 0 7 0 0 7 3L:6949912-6949975 7 CG10077 FBtr0076940|FBtr0333083 6949489|6949489 6950329|6950329 GCATTTA 7mer-A1 dme-miR-277-3p 3L - 6949911 6949963 3'utr CG10077 FlyBase G26403.1 GATGTTGTTGGCATTTATCTTTCCAGAGCCCTGGGCGTATTTGATTTCTTTAT 8 6949943 0.987179973 7 8 69 1 1.113943352 0.307692308 0.375 0.615384615 8 0 0 13 3L:6949911-6949963 7 2 2725 FBgn0035720 1853.276667 63.62 96.59333333 0.00107917 0.031436655 0.020705363 -10 -10 -10 0.1 dme-miR-965-3p 7mer-m8 TACGCTT 3L 6950083 6950089 - 3L_6950083_6950089_- 0.620204855 0.620204852 0.620204854 0 CG10077 FBtr0333083|FBtr0076940 6949489|6949489 6950329|6950329 3L - 6950037 6950178 3'utr CG10077 FlyBase G34895.1 ATGTTAGATGAGCGTCGGTGATGTACGTATCGTGTAGATCTCCTCCGCCCACATCATAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTTTTAATTTGATTAATCTCTTTGTTCCCCCCAAAACAAAACAAAACAA 460 6950061 0.982828116 29 428 3238 0.937172775 1.729974286 0.188481675 0.2 0.357766143 460 27 9 537 3L:6950037-6950178 7 CG10077 FBtr0076940|FBtr0333083 6949489|6949489 6950329|6950329 TACGCTT 7mer-m8 dme-miR-965-3p 3L - 6950039 6950186 3'utr CG10077 FlyBase G26404.1 GAGGGAAGATGTTAGATGAGCGTCGGTGATGTACGTATCGTGTAGATCTCCTCCGCCCACATCATAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTTTTAATTTGATTAATCTCTTTGTTCCCCCCAAAACAAAACAAAAC 374 6950061 0.979506461 28 359 2482 0.956603774 1.75076545 0.186792453 0.312834225 0.51509434 374 15 8 507 3L:6950039-6950186 7 143 2726 FBgn0035720 1853.276667 63.62 96.59333333 0.077160633 2.247720843 1.480433432 -28 -28 -28 0.1 dme-bantam-3p 6mer2-7 GATCTC 3L 6950137 6950142 - 3L_6950137_6950142_- 0.987493409 0.999898304 0.993695857 0.008771589 CG10077 FBtr0333083|FBtr0076940 6949489|6949489 6950329|6950329 3L - 6950037 6950178 3'utr CG10077 FlyBase G34895.1 ATGTTAGATGAGCGTCGGTGATGTACGTATCGTGTAGATCTCCTCCGCCCACATCATAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTTTTAATTTGATTAATCTCTTTGTTCCCCCCAAAACAAAACAAAACAA 460 6950135 0.982828116 29 428 3238 0.937172775 1.729974286 0.188481675 0.2 0.357766143 460 27 9 537 3L:6950037-6950178 6 CG10077 FBtr0076940|FBtr0333083 6949489|6949489 6950329|6950329 GATCTC 6mer2-7 dme-bantam-3p 3L - 6950039 6950186 3'utr CG10077 FlyBase G26404.1 GAGGGAAGATGTTAGATGAGCGTCGGTGATGTACGTATCGTGTAGATCTCCTCCGCCCACATCATAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTTTTAATTTGATTAATCTCTTTGTTCCCCCCAAAACAAAACAAAAC 374 6950135 0.979506461 28 359 2482 0.956603774 1.75076545 0.186792453 0.312834225 0.51509434 374 15 8 507 3L:6950039-6950186 6 154 2727 FBgn0035720 1853.276667 63.62 96.59333333 0.083096066 2.420622446 1.594312927 -7 -7 -7 0.1 dme-miR-282-5p 8mer-A1 AGAGGCTA 3L 6950305 6950312 - 3L_6950305_6950312_- 0.637903218 0.637903166 0.637903192 0 CG10077 FBtr0333083|FBtr0076940 6949489|6949489 6950329|6950329 3L - 6950218 6950409 stop_codon CG10077 FlyBase G34896.1 CGCAGGCGGCACCCTATATGATGGCGAACGGCGGCGACATCTTTGCCTATCCGCCGCCTCCGCTGCCTGTGCAGAACTAGAGGCCCTGCGGTTCGATAGAGGCTACCAGATTGTAGACCAGCTCTACTGTAATTTCCTTTCCCCACACGAACATTACACGCACATCCGCACACCCACCCGTATTAATTGTAC 403 6950313 0.958740188 22 396 1912 0.985355649 2.673020907 0.40167364 0.153846154 0.286610879 403 7 0 471 3L:6950218-6950409 8 CG10077 FBtr0076940|FBtr0333083 6949489|6949489 6950329|6950329 AGAGGCTA 8mer-A1 dme-miR-282-5p 3L - 6950242 6950335 stop_codon CG10077 FlyBase G26405.1 AACTAGAGGCCCTGCGGTTCGATAGAGGCTACCAGATTGTAGACCAGCTCTACTGTAATTTCCTTTCCCCACACGAACATTACACGCACATCCG 202 6950313 0.889044747 12 196 983 0.98125 2.195899652 0.384375 0.405940594 0.625 202 5 1 314 3L:6950242-6950335 8 280.5 2728 FBgn0035720 1853.276667 63.62 96.59333333 0.151353549 4.408990883 2.903927117 1 1 1 0.1 dme-miR-31a-5p 6mer3-8 TCTTGC 3L 6952884 6952889 - 3L_6952884_6952889_- 0.659462277 0.998876816 0.829169547 0.240002295 CG10077 FBtr0300937 6951802 6953758 3L - 6952775 6952963 3'utr CG10077 FlyBase G34903.1 AATGAGGGGAATGTGTTTGTTCTCCATGCATTGCTGGTTATATGATGTTGTTACTTTTAGTTCGTTTGTTGCTCTCTTGCTCATAGTTTTTAGTTGTGTCTCGTCAATCACATTTTGAGTAACTTAATTGTAAAAAAGCGATTTACTGTCAGTCAAGGAGTCAATGGCCAGCAAAATAATCTTAAAACA 29 6952886 0.992061641 17 25 293 0.9 1.431363764 0.066666667 0.034482759 0.066666667 29 3 0 27 3L:6952775-6952963 6 CG10077 FBtr0300937 6951802 6953758 TCTTGC 6mer3-8 dme-miR-31a-5p 3L - 6952839 6952926 3'utr CG10077 FlyBase G26412.1 TTATATGATGTTGTTACTTTTAGTTCGTTTGTTGCTCTCTTGCTCATAGTTTTTAGTTGTGTCTCGTCAATCACATTTTGAGTAACTT 11 6952886 0.992110176 8 11 120 1 1.146128036 0.071428571 0.181818182 0.357142857 11 0 0 14 3L:6952839-6952926 6 9 2729 FBgn0035720 1853.276667 63.62 96.59333333 0.004856264 0.141464948 0.093174132 -3 -3 -3 0.1 dme-miR-8-3p 7mer-m8 CAGTATT 3L 6960126 6960132 - 3L_6960126_6960132_- 0.661615173 0.661614999 0.661615086 1.41E-07 sgl FBtr0076938 6959552 6960185 3L - 6959923 6960238 stop_codon sgl FlyBase G34914.2 AGTACCAGCGCACCGGACTGCTCCGCTCGTGGGGCATTGTGCCGCAGCTTTAGGCGCGTCGGGCGGCGGAGGTGGTGGCATTTACACTTAAAGTTGGCGAAATTTCCAGTATTTGCGAGACTAAACTGTAAATATCCGTATTCTTTTCTGTAGCTGAGTGTATGTTAGATTGGGTCGATTAAGCTTAAGTTGAATCATGTTTAGGAGAATAGAATCGTTTCAAATCATCAGAGGACTCTGTCAGTTTTAAGTGAAAAGTAAAGTTGAATTCTTGCATTTTGTATATTAGTTTCTAAAGGATATAAGCTTTTAAAAC 273 6960157 0.987713674 41 257 2333 0.941558442 1.860338007 0.217532468 0.10989011 0.211038961 273 15 3 290 3L:6959923-6960238 7 sgl FBtr0076938 6959552 6960185 CAGTATT 7mer-m8 dme-miR-8-3p 3L - 6960047 6960247 stop_codon sgl FlyBase G26419.1 TCGGCAAGAAGTACCAGCGCACCGGACTGCTCCGCTCGTGGGGCATTGTGCCGCAGCTTTAGGCGCGTCGGGCGGCGGAGGTGGTGGCATTTACACTTAAAGTTGGCGAAATTTCCAGTATTTGCGAGACTAAACTGTAAATATCCGTATTCTTTTCTGTAGCTGAGTGTATGTTAGATTGGGTCGATTAAGCTTAAGTTG 155 6960157 0.986679355 32 146 1262 0.948356808 1.828230115 0.234741784 0.309677419 0.497652582 155 9 2 202 3L:6960047-6960247 7 65 2730 FBgn0261445 3785.826667 203.07 312.6666667 0.017169302 0.32008667 0.207889126 25 25 25 0.1 dme-miR-8-3p 7mer-A1 AGTATTA 3L 6973292 6973298 - 3L_6973292_6973298_- 0.823349562 0.823349562 0.823349562 0 Galphai FBtr0076934 6972748 6973342 3L - 6973232 6973460 stop_codon Galphai FlyBase G34930.2 AAAGGAGATATACACGCATCTCACCTGCGCCACGGATACGAACAACGTGAAGTTCGTCTTCGATGCCGTCACCGATGTGATCATCAAGAACAATCTGAAACAAATTGGCTTATTCTGAGAGGGCGGCGGAGCACAAGATCATCATTATTTAGCTGGCGTCGTAGTATTAAAGGAAAACGCGCATAAACATTTCCATTAAACGCTAAGAACTCGATACATTTACGCTCGT 78 6973312 0.878313935 29 70 453 0.909090909 1.602059991 0.147727273 0.128205128 0.227272727 78 7 1 80 3L:6973232-6973460 7 Galphai FBtr0076934 6972748 6973342 AGTATTA 7mer-A1 dme-miR-8-3p 3L - 6973286 6973461 stop_codon Galphai FlyBase G26431.1 AAAAGGAGATATACACGCATCTCACCTGCGCCACGGATACGAACAACGTGAAGTTCGTCTTCGATGCCGTCACCGATGTGATCATCAAGAACAATCTGAAACAAATTGGCTTATTCTGAGAGGGCGGCGGAGCACAAGATCATCATTATTTAGCTGGCGTCGTAGTATTAAAGGAA 48 6973301 0.964731954 19 40 282 0.835616438 1.183269844 0.164383562 0.333333333 0.561643836 48 9 3 61 3L:6973286-6973461 7 16.5 2731 FBgn0001104 5741.72 340.2133333 523.18 0.002873703 0.048498981 0.031537903 14 3 8.5 0.1 dme-miR-305-3p 7mer-m8 ATGTGCC 3L 706112 706118 - 3L_706112_706118_- 0.67049812 0.659060981 0.66477955 0.008087251 CG13895 FBtr0072605|FBtr0331771 705946|705946 706134|706134 3L - 706090 706170 stop_codon CG13895 FlyBase G33103.1 AAAAAGAGTGAGGAAATGGACAAATCCTTAGAATAAGTACCAAACCAAAAACATGTGCCTTAGGTTATAAGTATGTTTAGA 93 706111 0.922031617 7 92 627 0.982142857 2.041392685 0.026785714 0.150537634 0.294642857 93 2 0 110 3L:706090-706170 7 CG13895 FBtr0331771|FBtr0072605 705946|705946 706134|706134 ATGTGCC 7mer-m8 dme-miR-305-3p 3L - 706091 706167 stop_codon CG13895 FlyBase G25046.1 AAGAGTGAGGAAATGGACAAATCCTTAGAATAAGTACCAAACCAAAAACATGTGCCTTAGGTTATAAGTATGTTTAG 74 706111 0.99217772 6 72 492 0.982142857 2.041392685 0.035714286 0.391891892 0.598214286 74 2 0 110 3L:706091-706167 7 70 2732 FBgn0035158 245.0033333 15.73666667 24.28 0.285710398 4.448210125 2.883031301 -7 -7 -7 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 7123385 7123390 - 3L_7123385_7123390_- 0.730949445 0.730949445 0.730949445 0 msl-3 FBtr0076926|FBtr0076926|FBtr0076926 7123211|7123211|7123211 7123532|7123532|7123532 3L - 7123373 7123404 3'utr msl-3 FlyBase G34937.1 AAAAAGTTTCCTAATGTGATCGTATAATCGAA 10 7123397 0.658593152 5 10 81 1 1.146128036 0.071428571 0.3 0.5 10 0 0 14 3L:7123373-7123404 6 msl-3 FBtr0076926|FBtr0076926|FBtr0076926 7123211|7123211|7123211 7123532|7123532|7123532 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 7123362 7123405 3'utr msl-3 FlyBase G26438.1 AAAAAAGTTTCCTAATGTGATCGTATAATCGAATAATGCCTATA 5 7123395 0.989834517 3 4 43 0.833333333 0.698970004 0 0.2 0.333333333 5 1 0 5 3L:7123362-7123405 6 7.5 2733 FBgn0002775 342.2933333 21.25 32.62333333 0.021911031 0.352941176 0.229896802 7 5 6 0.1 dme-miR-14-3p 6mer3-8 AAGACT 3L 7326478 7326483 - 3L_7326478_7326483_- 0.999812491 0.999998807 0.999905649 0.000131734 CG8602 FBtr0076884 7326271 7326891 3L - 7326464 7326496 3'utr CG8602 FlyBase G34969.1 ACAAAAAACATTCAAGACTTGTGCGCCTAGAGC 11 7326475 0.740006783 4 11 51 1 1.176091259 0 0.363636364 0.533333333 11 0 0 15 3L:7326464-7326496 6 CG8602 FBtr0076884 7326271 7326891 AAGACT 6mer3-8 dme-miR-14-3p 3L - 7326450 7326494 3'utr CG8602 FlyBase G26456.1 AAAAAACATTCAAGACTTGTGCGCCTAGAGCAACGAATTGCTATT 12 7326475 0.953117455 5 12 54 1 1.278753601 0 0.416666667 0.631578947 12 0 0 19 3L:7326450-7326494 6 11 2734 FBgn0035763 925.6666667 44.84666667 68.68666667 0.011883327 0.245280214 0.16014753 -8 -8 -8 0.1 dme-miR-11-3p 7mer-m1 TGTGATG 3L 7326760 7326766 - 3L_7326760_7326766_- 0.604699661 0.478677282 0.541688472 0.089111294 CG8602 FBtr0332734|FBtr0076884 7326523|7326271 7326891|7326891 3L - 7326647 7326865 3'utr CG8602 FlyBase G34970.3 CGCCCGCAGATCGGATTATTATCGGTTATTTAGTGTAGACATAAAAGTTACTCTCTGCGGGCAATGCGCCTTGGTCCGTTCCACGATGTGATGATGATGTGTGATGTGCGTCTCGAGTCGCAAATTGGTATTTACTAACTGCAATTGTTTGTCATCCGACGATAGGGATATACAATACGCCCTGATCAGCCATGAATCAGTATTGATATGCGATTCGAG 202 7326768 0.817454255 39 189 1523 0.944680851 1.568201724 0.442553191 0.133663366 0.255319149 202 8 5 222 3L:7326647-7326865 7 CG8602 FBtr0332734|FBtr0076884 7326523|7326271 7326891|7326891 TGTGATG 7mer-m1 dme-miR-11-3p 3L - 7326660 7326817 3'utr CG8602 FlyBase G26457.3 TACTCTCTGCGGGCAATGCGCCTTGGTCCGTTCCACGATGTGATGATGATGTGTGATGTGCGTCTCGAGTCGCAAATTGGTATTTACTAACTGCAATTGTTTGTCATCCGACGATAGGGATATACAATACGCCCTGATCAGCCATGAATCAGTATTGA 155 7326768 0.910162018 23 141 1185 0.93220339 1.740362689 0.521186441 0.412903226 0.61440678 155 13 3 220 3L:7326660-7326817 7 112.5 2735 FBgn0035763 925.6666667 44.84666667 68.68666667 0.12153403 2.508547644 1.637872464 2 2 2 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 7329872 7329878 + 3L_7329872_7329878_+ 0.660602405 0.661426299 0.661014352 0.000582585 CG42307 FBtr0299691|FBtr0344452|FBtr0299692 7329590|7329590|7329590 7333471|7333471|7333471 3L + 7329847 7329896 3'utr CG42307 FlyBase G28429.1 AAATCAAACCAATACGCACCAGCAATGTGTTCGAAAAACCTGGGCCCAAG 25 7329872 0.833473219 5 24 100 0.962962963 1.414973348 0.074074074 0.08 0.148148148 25 1 0 26 3L:7329847-7329896 7 CG42307 FBtr0299692|FBtr0344452|FBtr0299691 7329590|7329590|7329590 7333471|7333471|7333471 TGTGTTC 7mer-m8 dme-miR-317-3p 3L + 7329847 7329893 3'utr CG42307 FlyBase G21514.1 AAATCAAACCAATACGCACCAGCAATGTGTTCGAAAAACCTGGGCCC 13 7329872 0.904467857 3 12 53 0.933333333 1.146128036 0 0.153846154 0.266666667 13 1 0 14 3L:7329847-7329893 7 19 2736 FBgn0259203 453.5333333 57.31 87.29333333 0.041893282 0.331530274 0.217656942 0 0 0 0.1 dme-miR-252-5p 7mer-m8 GTACTTA 3L 7333319 7333325 + 3L_7333319_7333325_+ 0.526864978 0.588299504 0.557582241 0.043440752 CG42307 FBtr0299691|FBtr0344452|FBtr0299692 7329590|7329590|7329590 7333471|7333471|7333471 3L + 7333296 7333383 3'utr CG42307 FlyBase G28431.1 TCTACAAGTTATGGAATTTCATTGTACTTATACCTAACTTTGAATGCATTGAATTATTTTCTAGTATTTACCTTATATTGTATTATTG 15 7333318 0.809788193 7 13 157 0.875 1.146128036 0.25 0.066666667 0.125 15 2 0 14 3L:7333296-7333383 7 CG42307 FBtr0299692|FBtr0344452|FBtr0299691 7329590|7329590|7329590 7333471|7333471|7333471 GTACTTA 7mer-m8 dme-miR-252-5p 3L + 7333306 7333365 3'utr CG42307 FlyBase G21516.1 ATGGAATTTCATTGTACTTATACCTAACTTTGAATGCATTGAATTATTTTCTAGTATTTA 12 7333318 0.991224745 4 10 108 0.888888889 1.204119983 0.055555556 0.416666667 0.611111111 12 2 0 16 3L:7333306-7333365 7 9 2737 FBgn0259203 453.5333333 57.31 87.29333333 0.019844186 0.157040656 0.103100657 1 1 1 0.1 dme-miR-184-3p 7mer-A1 CCGTCCA 3L 7333767 7333773 - 3L_7333767_7333773_- 0.823347614 0.823347825 0.823347719 1.41E-07 CG43780 FBtr0331507|FBtr0331508 7333542|7333542 7334274|7334274 3L - 7333577 7333929 3'utr CG43780 FlyBase G34984.1 AAGAGCCCACTAACCCGTCTGCACCCACCAACCATATCAGTTTTGCATGCAGTACAAATAGTTTCATTAGCAACCAGTTTTGTTCGAGCCGATTCCATTCCATTAATCGCAATCTGACAATGTGCCTTTCACGTAGAGACTCGTAAGAAATTTATACCGTCCAAGTGTCTTTTCTAGCGCCGTAAGATCGAATTGTATTTTTACATTTAATACCCATTTAGGGTAGTCTGTCTACAGATGCTGCATTTAATGTTGTCCAATATTCTACTCGTATGAAAATATCAGTGTCTTGTATCTACTACAAACTCTATACATTTGTATTCGTCCATTAGTTTTGTAATATTGTATTTTGA 1024 7333775 0.879387613 70 996 7404 0.97492163 2.140577871 0.123040752 0.1875 0.347962382 1024 24 8 1244 3L:7333577-7333929 7 CG43780 FBtr0331508|FBtr0331507 7333542|7333542 7334274|7334274 CCGTCCA 7mer-A1 dme-miR-184-3p 3L - 7333662 7333927 3'utr CG43780 FlyBase G26467.3 GAGCCCACTAACCCGTCTGCACCCACCAACCATATCAGTTTTGCATGCAGTACAAATAGTTTCATTAGCAACCAGTTTTGTTCGAGCCGATTCCATTCCATTAATCGCAATCTGACAATGTGCCTTTCACGTAGAGACTCGTAAGAAATTTATACCGTCCAAGTGTCTTTTCTAGCGCCGTAAGATCGAATTGTATTTTTACATTTAATACCCATTTAGGGTAGTCTGTCTACAGATGCTGCATTTAATGTTGTCCAATATTCTAC 825 7333775 0.876668664 50 799 5386 0.967585089 2.298853076 0.132090762 0.349090909 0.564829822 825 35 5 1194 3L:7333662-7333927 7 589.5 2738 FBgn0264302 77.98333333 6.63 10.06333333 7.559307544 88.91402715 58.57899967 2 2 2 0.1 dme-miR-970-3p 6mer3-8 TCTTAT 3L 7333967 7333972 - 3L_7333967_7333972_- 0.78606528 0.990014666 0.888039973 0.144214004 CG43780 FBtr0331507|FBtr0331508 7333542|7333542 7334274|7334274 3L - 7333945 7334006 3'utr CG43780 FlyBase G34985.1 ATACTTATACATGCCGGCAATGCTACGAATTGCTTCTTATATATCTCTCTCCCCCCAAAACT 19 7333958 0.930624221 7 17 128 0.923076923 1.079181246 0 0.315789474 0.5 19 1 1 24 3L:7333945-7334006 6 CG43780 FBtr0331508|FBtr0331507 7333542|7333542 7334274|7334274 TCTTAT 6mer3-8 dme-miR-970-3p 3L - 7333934 7333986 3'utr CG43780 FlyBase G26468.1 TGCTACGAATTGCTTCTTATATATCTCTCTCCCCCCAAAACTAATCCTAGCTA 19 7333957 0.874467543 8 17 149 0.846153846 1.342422681 0.115384615 0.315789474 0.5 19 4 0 22 3L:7333934-7333986 6 13.5 2739 FBgn0264302 77.98333333 6.63 10.06333333 0.173113913 2.036199095 1.341503809 -14 -15 -14.5 0.1 dme-miR-184-5p 7mer-m8 TGATAAG 3L 7335590 7335596 - 3L_7335590_7335596_- 0.658839934 0.658966411 0.658903173 8.94E-05 eco FBtr0076882|FBtr0100278 7335440|7335440 7335670|7335670 3L - 7335557 7335672 stop_codon eco FlyBase G34994.1 GATCGGGGAAATCTATTGAAGCTATTGAATAGCTGGATTGTTTTTGAGTTAGGATTGCTTCGAAACCTGTAATAGTTGATAAGCAAGTGCGATTATGTTACTAGCGGCACGAAGAC 67 7335603 0.977787832 14 61 494 0.906666667 1.230448921 0.28 0.119402985 0.213333333 67 4 3 68 3L:7335557-7335672 7 eco FBtr0076882|FBtr0100278 7335440|7335440 7335670|7335670 TGATAAG 7mer-m8 dme-miR-184-5p 3L - 7335553 7335655 3'utr eco FlyBase G26477.1 GAAGCTATTGAATAGCTGGATTGTTTTTGAGTTAGGATTGCTTCGAAACCTGTAATAGTTGATAAGCAAGTGCGATTATGTTACTAGCGGCACGAAGACGCGC 30 7335602 0.984158829 10 28 218 0.952380952 1.602059991 0.238095238 0.3 0.5 30 2 0 40 3L:7335553-7335655 7 25.5 2740 FBgn0035766 1385.486667 47.26666667 72.42333333 0.018405085 0.539492243 0.35209647 7 6 6.5 0.1 dme-miR-34-5p 6mer2-7 ACTGCC 3L 7341923 7341928 - 3L_7341923_7341928_- 0.943699245 0.850113355 0.8969063 0.066175154 CG8596 FBtr0332733|FBtr0332732|FBtr0076881 7341882|7341882|7341882 7341977|7341977|7341977 3L - 7341902 7341941 3'utr CG8596 FlyBase G35011.1 ACATCGTTGCAATACTGCCCCTTAAACTAGCTTTAAAATA 11 7341928 0.744206599 5 10 71 0.928571429 1.113943352 0.071428571 0.181818182 0.357142857 11 1 0 13 3L:7341902-7341941 6 CG8596 FBtr0332732|FBtr0076881|FBtr0332733 7341882|7341882|7341882 7341977|7341977|7341977 ACTGCC 6mer2-7 dme-miR-34-5p 3L - 7341903 7341945 3'utr CG8596 FlyBase G26489.1 AGACACATCGTTGCAATACTGCCCCTTAAACTAGCTTTAAAAT 9 7341929 0.759191739 6 9 57 1 1.041392685 0 0.222222222 0.363636364 9 0 0 11 3L:7341903-7341945 6 9.5 2741 FBgn0035767 191.44 11.73333333 17.72 0.049623903 0.809659091 0.536117381 0 1 0.5 0.1 dme-miR-304-5p 7mer-m8 TGAGATT 3L 7352547 7352553 + 3L_7352547_7352553_+ 0.620203303 0.620203397 0.62020335 7.07E-08 qm FBtr0332729|FBtr0076846|FBtr0302045 7352392|7352392|7352392 7353622|7353622|7353622 3L + 7352526 7352567 5'utr qm FlyBase G28446.1 CTGCAGAAGCTGAAGATATTCTGAGATTTATGTTACCCTTTG 19 7352544 0.706644077 5 16 162 0.954545455 1.322219295 0.181818182 0.157894737 0.272727273 19 1 0 21 3L:7352526-7352567 7 qm FBtr0076846|FBtr0302045|FBtr0332729 7352392|7352392|7352392 7353622|7353622|7353622 TGAGATT 7mer-m8 dme-miR-304-5p 3L + 7352530 7352562 5'utr qm FlyBase G21526.1 AGAAGCTGAAGATATTCTGAGATTTATGTTACC 9 7352544 0.578140011 6 9 72 1 1.079181246 0 0.333333333 0.5 9 0 0 12 3L:7352530-7352562 7 12.5 2742 FBgn0019662 681.67 36.89 56.62 0.018337319 0.338845216 0.220770046 3 3 3 0.1 dme-miR-968-5p 6mer3-8 ACTACT 3L 7367135 7367140 - 3L_7367135_7367140_- 0.985634954 0.727646602 0.856640778 0.182425347 Sh3beta FBtr0076872|FBtr0302546|FBtr0076873 7366839|7366839|7366839 7367552|7367552|7367552 3L - 7367062 7367145 3'utr Sh3beta FlyBase G35047.1 TTATGACTACTGCGGTTCTTAAGCTAAGTTCATGAGCGTATTTAAACGAGGGCATTCGATTGTGTTGGCCCCCGGTGAAAAGAC 23 7367127 0.707315857 9 23 158 1 1.414973348 0.115384615 0.130434783 0.230769231 23 0 0 26 3L:7367062-7367145 6 Sh3beta FBtr0076873|FBtr0302546|FBtr0076872 7366839|7366839|7366839 7367552|7367552|7367552 ACTACT 6mer3-8 dme-miR-968-5p 3L - 7367091 7367153 3'utr Sh3beta FlyBase G26515.1 CGAATTCATTATGACTACTGCGGTTCTTAAGCTAAGTTCATGAGCGTATTTAAACGAGGGCAT 12 7367127 0.98595592 5 11 88 0.941176471 1.204119983 0.058823529 0.333333333 0.529411765 12 1 0 16 3L:7367091-7367153 6 11.5 2743 FBgn0035772 3075.326667 262.2333333 402.8 0.00373944 0.043854074 0.028550149 -13 -13 -13 0.1 dme-miR-304-5p 6mer2-7 GAGATT 3L 7367217 7367222 - 3L_7367217_7367222_- 0.93945755 0.999642974 0.969550262 0.042557575 Sh3beta FBtr0076872|FBtr0302546|FBtr0076873 7366839|7366839|7366839 7367552|7367552|7367552 3L - 7367166 7367226 3'utr Sh3beta FlyBase G35048.1 CTACGAGATTTATTTAGAGACTTTTTAGACCTTCATCGGTAGAGCATGAAATCGAAGATCT 31 7367203 0.690610512 12 29 286 0.972222222 1.544068044 0.5 0.161290323 0.277777778 31 1 0 35 3L:7367166-7367226 6 Sh3beta FBtr0076873|FBtr0302546|FBtr0076872 7366839|7366839|7366839 7367552|7367552|7367552 GAGATT 6mer2-7 dme-miR-304-5p 3L - 7367190 7367222 3'utr Sh3beta FlyBase G26516.1 GAGATTTATTTAGAGACTTTTTAGACCTTCATC 13 7367202 0.61841244 6 11 127 0.875 0.669006781 0.625 0.230769231 0.375 13 0 2 14 3L:7367190-7367222 6 16.5 2744 FBgn0035772 3075.326667 262.2333333 402.8 0.005365284 0.062921063 0.040963257 -19 -20 -19.5 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 7372650 7372655 + 3L_7372650_7372655_+ 0.996732882 0.997281966 0.997007424 0.000388272 akirin FBtr0076849|FBtr0302545|FBtr0076848|FBtr0302543|FBtr0332730|FBtr0302544 7372590|7372590|7372590|7372590|7372590|7372590 7373711|7372783|7372783|7373711|7373711|7373711 3L + 7372615 7372704 3'utr akirin FlyBase G28467.1 CAGAAAGAAGAAATTAATAATTGCACTACGATCTTATGTGACGGTAGATCTACCGCGACAACAACAGCCCTCATAAACTATAACAAACAA 319 7372651 0.824285241 14 305 2285 0.960835509 2.565847819 0.274151436 0.169278997 0.308093995 319 15 0 368 3L:7372615-7372704 6 akirin FBtr0332730|FBtr0302544|FBtr0076848|FBtr0302543|FBtr0076849|FBtr0302545 7372590|7372590|7372590|7372590|7372590|7372590 7373711|7373711|7372783|7373711|7373711|7372783 ATGTGA 6mer3-8 dme-miR-1003-3p 3L + 7372620 7372709 3'utr akirin FlyBase G21547.1 AGAAGAAATTAATAATTGCACTACGATCTTATGTGACGGTAGATCTACCGCGACAACAACAGCCCTCATAAACTATAACAAACAACAAAT 242 7372651 0.960643368 14 229 1656 0.949602122 2.076761772 0.265251989 0.396694215 0.612732095 242 17 2 358 3L:7372620-7372709 6 266 2745 FBgn0082598 6331.316667 435.1366667 666.7366667 0.042013378 0.611302196 0.398958109 -1 -1 -1 0.1 dme-miR-965-3p 7mer-m8 TACGCTT 3L 7373545 7373551 + 3L_7373545_7373551_+ 0.614229753 0.618823633 0.616526693 0.003248307 akirin FBtr0076849|FBtr0302543|FBtr0332730|FBtr0302544 7372590|7372590|7372590|7372590 7373711|7373711|7373711|7373711 3L + 7373517 7373587 3'utr akirin FlyBase G28471.1 AAGTTAAATTGAACGCTTTCTTATAAAATACGCTTGACAGAAGATGTTTCATGTTCATTGCAATTATTTTT 121 7373545 0.984754637 13 115 903 0.958041958 1.835690571 0.244755245 0.157024793 0.286713287 121 5 1 137 3L:7373517-7373587 7 akirin FBtr0332730|FBtr0302544|FBtr0302543|FBtr0076849 7372590|7372590|7372590|7372590 7373711|7373711|7373711|7373711 TACGCTT 7mer-m8 dme-miR-965-3p 3L + 7373500 7373572 3'utr akirin FlyBase G21551.1 TATAAAAGTTATTCATTAAGTTAAATTGAACGCTTTCTTATAAAATACGCTTGACAGAAGATGTTTCATGTTC 70 7373545 0.981879236 9 68 504 0.968421053 1.963787827 0.210526316 0.285714286 0.473684211 70 3 0 92 3L:7373500-7373572 7 78 2746 FBgn0082598 6331.316667 435.1366667 666.7366667 0.012319712 0.179254027 0.116987716 0 0 0 0.1 dme-miR-283-5p 8mer-m1 TGATATTT 3L 7374497 7374504 - 3L_7374497_7374504_- 0.555593841 0.555593841 0.555593841 0 SMSr FBtr0076870 7374048 7374593 3L - 7374434 7374536 3'utr SMSr FlyBase G35059.1 AAAGCAAACATGCAGAAACTAACCATACCGACTGATATTTTTATTTCGAAATTTCCATCGATCCCCTTCCTTTCACAGCTCTCCCCTGTATTATTGACAGCAT 85 7374501 0.74484519 15 78 602 0.923913043 1.452297671 0.141304348 0.070588235 0.141304348 85 5 2 85 3L:7374434-7374536 8 SMSr FBtr0076870 7374048 7374593 TGATATTT 8mer-m1 dme-miR-283-5p 3L - 7374487 7374548 3'utr SMSr FlyBase G26530.2 GTCGCTCTTCGAAAAGCAAACATGCAGAAACTAACCATACCGACTGATATTTTTATTTCGAA 40 7374511 0.976968592 5 36 228 0.964285714 1.73239376 0.071428571 0.375 0.553571429 40 2 0 54 3L:7374487-7374548 8 49.5 2747 FBgn0052380 477.4766667 22.27333333 34.04333333 0.103669987 2.222388506 1.454029178 -3 7 2 0.1 dme-miR-283-5p 8mer-m1 TGATATTT 3L 7432789 7432796 - 3L_7432789_7432796_- 0.555593841 0.555502265 0.555548053 6.47E-05 Rac2 FBtr0332800 7432760 7433931 3L - 7432731 7432813 3'utr Rac2 FlyBase G35065.1 GATGTTAATTTATATACTGATATTTATGTTAAATAAATGCATACATTTTGCCAATTTGTTTTAACGAAAGAGAGCGAGCGGTA 18 7432800 0.990313268 12 18 182 1 1.322219295 0.285714286 0.166666667 0.285714286 18 0 0 21 3L:7432731-7432813 8 Rac2 FBtr0332800 7432760 7433931 TGATATTT 8mer-m1 dme-miR-283-5p 3L - 7432770 7432807 3'utr Rac2 FlyBase G26533.1 AATTTATATACTGATATTTATGTTAAATAAATGCATAC 8 7432799 0.947867172 4 8 76 1 1.204119983 0.0625 0.625 0.8125 8 0 0 16 3L:7432770-7432807 8 10.5 2748 FBgn0014011 1633.203333 85.34333333 130.3833333 0.006429083 0.123032457 0.080531765 4 3 3.5 0.1 dme-miR-7-5p 7mer-m8 GTCTTCC 3L 7432877 7432883 - 3L_7432877_7432883_- 0.705947322 0.705944025 0.705945673 2.33E-06 Rac2 FBtr0332800 7432760 7433931 3L - 7432867 7432916 3'utr Rac2 FlyBase G35067.1 CGTGTGAATGTGTGTGTGTGTGTCTGATCAATGGTCTTCCCGCTCAACGC 26 7432885 0.844410001 3 23 227 0.9 1.130333768 0.733333333 0.153846154 0.266666667 26 2 1 27 3L:7432867-7432916 7 Rac2 FBtr0332800 7432760 7433931 GTCTTCC 7mer-m8 dme-miR-7-5p 3L - 7432817 7432997 3'utr Rac2 FlyBase G26534.1 TGGCCAATATCTGAACAATCGGGGAATGTGGGAAGCCGACAAAAAAAGAACTTTCATTTATACATATAGTATTTAGAGTTACGTGTGAATGTGTGTGTGTGTGTCTGATCAATGGTCTTCCCGCTCAACGCATTTGCCTGGACTTGATTTAATGTATACTAAATGCACAATTAGCCTCTAC 50 7432885 0.980889737 16 49 348 0.986486486 1.86332286 0.378378378 0.32 0.540540541 50 1 0 73 3L:7432817-7432997 7 21.5 2749 FBgn0014011 1633.203333 85.34333333 130.3833333 0.013164313 0.251923603 0.164898377 2 2 2 0.1 dme-miR-305-5p 6mer3-8 AGTACA 3L 752605 752610 + 3L_752605_752610_+ 0.999976192 0.977551728 0.98876396 0.015856516 emc FBtr0072578 752306 753492 3L + 752541 752630 3'utr emc FlyBase G26886.1 TAGTTTAAACATTTAATAACAAGAATACAACAACACAAAACCTAGCATTAGAGCAGCGTAAGCAAGTACACATTATGATTATTAATTAAA 14 752613 0.966877354 7 14 78 1 1.146128036 0.142857143 0 0 14 0 0 14 3L:752541-752630 6 emc FBtr0072578 752306 753492 AGTACA 6mer3-8 dme-miR-305-5p 3L + 752576 752623 3'utr emc FlyBase G20347.1 CAAAACCTAGCATTAGAGCAGCGTAAGCAAGTACACATTATGATTATT 9 752613 0.766173566 3 9 46 1 1.146128036 0.142857143 0.444444444 0.642857143 9 0 0 14 3L:752576-752623 6 7 2750 FBgn0000575 1770.966667 105.6933333 162.6966667 0.003952644 0.066229343 0.043024852 -8 -8 -8 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-m8 CTGTGAT 3L 753253 753259 + 3L_753253_753259_+ 0.568710917 0.568541827 0.568626372 0.000119572 emc FBtr0072578|FBtr0072578|FBtr0072578 752306|752306|752306 753492|753492|753492 3L + 753227 753288 3'utr emc FlyBase G26889.1 CCTATAAATATATATTAATATATGTTCTGTGATCTGTAGCATACTTTGTACAAAGTGTTTTT 1016 753260 0.66567851 18 959 10456 0.947533281 1.827512865 0.247454973 0.203740157 0.366483947 1016 50 17 1210 3L:753227-753288 7 emc FBtr0072578|FBtr0072578|FBtr0072578 752306|752306|752306 753492|753492|753492 CTGTGAT 7mer-m8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 753224 753287 3'utr emc FlyBase G20350.1 AAACCTATAAATATATATTAATATATGTTCTGTGATCTGTAGCATACTTTGTACAAAGTGTTTT 771 753261 0.715575089 17 727 7850 0.942783945 1.812520152 0.222886422 0.367055772 0.583262169 771 51 16 1104 3L:753224-753287 7 863 2751 FBgn0000575 1770.966667 105.6933333 162.6966667 0.487304485 8.165131828 5.304349608 -7 -8 -7.5 0.1 dme-miR-980-5p 7mer-A1 AAAAACA 3L 753361 753367 + 3L_753361_753367_+ 0.77540032 0.782911824 0.779156072 0.005311433 emc FBtr0072578 752306 753492 3L + 753295 753386 3'utr emc FlyBase G26890.1 ATAATTATGCGATTTTAATTATGATCCGCAATCGAAATTACACATTTTTGTTCTCATTTCGATGGTAAAAACACTCTATCATGATGTAAAAA 11 753342 0.988918706 7 11 100 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 3L:753295-753386 7 emc FBtr0072578 752306 753492 AAAAACA 7mer-A1 dme-miR-980-5p 3L + 753334 753364 3'utr emc FlyBase G20351.1 ACACATTTTTGTTCTCATTTCGATGGTAAAA 5 753346 0.929513036 4 4 37 0.833333333 0.698970004 0.166666667 0.2 0.333333333 5 1 0 5 3L:753334-753364 4 3.5 2752 FBgn0000575 1770.966667 105.6933333 162.6966667 0.001976322 0.033114671 0.021512426 19 15 17 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA 3L 753408 753413 + 3L_753408_753413_+ 0.999999994 0.999977909 0.999988952 1.56E-05 emc FBtr0072578 752306 753492 3L + 753398 753427 3'utr emc FlyBase G26891.1 AGAAAACATTTGATGATGTTGCGAAAAAAT 6 753411 0.793961073 3 6 38 1 0.954242509 0.333333333 0.333333333 0.555555556 6 0 0 9 3L:753398-753427 6 emc FBtr0072578 752306 753492 TGATGA 6mer3-8 dme-miR-2a-2-5p 3L + 753396 753422 3'utr emc FlyBase G20352.1 AAAGAAAACATTTGATGATGTTGCGAA 5 753413 0.854041908 2 4 24 1 0.84509804 0.142857143 0.4 0.571428571 5 0 0 7 3L:753396-753422 6 5 2753 FBgn0000575 1770.966667 105.6933333 162.6966667 0.002823317 0.047306673 0.030732037 -3 -5 -4 0.1 dme-miR-995-5p 6mer2-7 ATTCGG 3L 7538105 7538110 + 3L_7538105_7538110_+ 0.939139345 0.999991614 0.96956548 0.043029074 lqf FBtr0112941|FBtr0331834|FBtr0076795|FBtr0331836|FBtr0076796|FBtr0331833|FBtr0076798|FBtr0331838|FBtr0076794|FBtr0076797|FBtr0331837|FBtr0331835 7537034|7537034|7537034|7537034|7537034|7536739|7537034|7536739|7537034|7537034|7537034|7536739 7538279|7540012|7538279|7538279|7538279|7538279|7538279|7538279|7538279|7538279|7538279|7538279 3L + 7538044 7538148 3'utr lqf FlyBase G28524.1 TATAAGAGTAACTTAATGATAAACAAAATATACATATATATATATATATAAAAGAAAGCCGATTCGGTGTGAAATTATGCTTAAGAGATTTACATGCCTGACTAG 13 7538106 0.981933574 7 12 87 0.933333333 1.146128036 0.4 0.076923077 0.2 13 1 0 14 3L:7538044-7538148 6 lqf FBtr0076794|FBtr0076797|FBtr0331837|FBtr0331835|FBtr0076798|FBtr0331838|FBtr0076795|FBtr0076796|FBtr0331836|FBtr0112941|FBtr0331834|FBtr0331833 7537034|7537034|7537034|7536739|7537034|7536739|7537034|7537034|7537034|7537034|7537034|7536739 7538279|7538279|7538279|7538279|7538279|7538279|7538279|7538279|7538279|7538279|7540012|7538279 ATTCGG 6mer2-7 dme-miR-995-5p 3L + 7538093 7538137 3'utr lqf FlyBase G21584.1 AAAAGAAAGCCGATTCGGTGTGAAATTATGCTTAAGAGATTTACA 7 7538106 0.969268682 3 7 42 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 3L:7538093-7538137 6 7 2754 FBgn0028582 1900.05 62.33333333 95.30333333 0.003684114 0.112299465 0.073449687 -1 -1 -1 0.1 dme-miR-965-3p 6mer3-8 TACGCT 3L 7777471 7777476 - 3L_7777471_7777476_- 0.999997916 0.999994713 0.999996315 2.26E-06 CG32369 FBtr0304992 7777103 7778469 3L - 7777455 7777499 3'utr CG32369 FlyBase G35102.1 ATGAACCTATATATAAAGTGCTATACGCTAAATGCTTATTTCTGT 25 7777476 0.837950856 4 25 169 1 1.491361694 0 0.16 0.322580645 25 0 0 31 3L:7777455-7777499 6 CG32369 FBtr0304992 7777103 7778469 TACGCT 6mer3-8 dme-miR-965-3p 3L - 7777449 7777577 3'utr CG32369 FlyBase G26553.1 CTGAACTATGTCCCTCTCTATAACACCCCTACTCTCTCTTGATTATGCTTAGGCTAACTAAATGATATGCTCACCTATATGAACCTATATATAAAGTGCTATACGCTAAATGCTTATTTCTGTATTCGT 18 7777476 0.982965206 8 17 126 1 1.380211242 0.041666667 0.277777778 0.458333333 18 0 0 24 3L:7777449-7777577 6 17 2755 FBgn0052369 1823.153333 38.16 58.06666667 0.009324504 0.445492662 0.292766935 0 0 0 0.1 dme-miR-92b-3p 7mer-A1 TGCAATA 3L 7777742 7777748 - 3L_7777742_7777748_- 0.782509349 0.782911743 0.782710546 0.00028454 CG32369 FBtr0304992 7777103 7778469 3L - 7777721 7777757 3'utr CG32369 FlyBase G35105.1 AAGACAATCTGCAATATTTTTTTGATATACCTAAACG 6 7777750 0.990802709 3 4 45 0.714285714 0.698970004 0 0.166666667 0.285714286 6 2 0 5 3L:7777721-7777757 7 CG32369 FBtr0304992 7777103 7778469 TGCAATA 7mer-A1 dme-miR-92b-3p 3L - 7777724 7777772 3'utr CG32369 FlyBase G26555.1 AGCGGCTGGAACTCTAAGACAATCTGCAATATTTTTTTGATATACCTAA 5 7777750 0.990979677 3 4 51 0.8 0.602059991 0.2 0 0 5 1 0 4 3L:7777724-7777772 7 5 2756 FBgn0052369 1823.153333 38.16 58.06666667 0.002742501 0.131027254 0.086107922 2 2 2 0.1 dme-bantam-3p 7mer-A1 GATCTCA 3L 7814496 7814502 - 3L_7814496_7814502_- 0.823341454 0.823349225 0.823345339 5.44E-06 Pdp1 FBtr0076775|FBtr0076777|FBtr0306535|FBtr0300500|FBtr0346536|FBtr0076776|FBtr0076782|FBtr0332082|FBtr0332081|FBtr0076780|FBtr0332083|FBtr0332080|FBtr0300499 7814335|7814335|7811456|7814335|7811913|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335 7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325 3L - 7814478 7814526 3'utr Pdp1 FlyBase G35131.1 AATATATAATGAAAACCATACATGGATCTCAAGACAGAGTTAAAGAAAT 18 7814504 0.783370631 2 17 74 0.944444444 1.230448921 0 0 0 18 1 0 17 3L:7814478-7814526 7 Pdp1 FBtr0332080|FBtr0076782|FBtr0076780|FBtr0332082|FBtr0332081|FBtr0332083|FBtr0300499|FBtr0076775|FBtr0076777|FBtr0300500|FBtr0306535|FBtr0076776|FBtr0346536 7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7811456|7814335|7811913 7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325 GATCTCA 7mer-A1 dme-bantam-3p 3L - 7814486 7814520 3'utr Pdp1 FlyBase G26585.1 TAATGAAAACCATACATGGATCTCAAGACAGAGTT 17 7814505 0.73199212 3 17 64 1 1.380211242 0.083333333 0.352941176 0.541666667 17 0 0 24 3L:7814486-7814520 7 17.5 2757 FBgn0016694 2143.56 56.17 86.44 0.008163989 0.31155421 0.202452568 2 3 2.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 3L 7814945 7814950 - 3L_7814945_7814950_- 0.99994931 0.999970462 0.999959886 1.50E-05 Pdp1 FBtr0076775|FBtr0076777|FBtr0306535|FBtr0300500|FBtr0346536|FBtr0076776|FBtr0076782|FBtr0332082|FBtr0332081|FBtr0076780|FBtr0332083|FBtr0332080|FBtr0300499 7814335|7814335|7811456|7814335|7811913|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335 7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325 3L - 7814927 7814974 3'utr Pdp1 FlyBase G35133.2 TTTGTTATACATTTGAGTTACATTTACCTGCATACAATTATATAGAAA 148 7814952 0.730174722 9 142 1137 0.968085106 1.959041392 0.468085106 0.236486486 0.39893617 148 5 1 182 3L:7814927-7814974 6 Pdp1 FBtr0332080|FBtr0076782|FBtr0076780|FBtr0332082|FBtr0332081|FBtr0332083|FBtr0300499|FBtr0076775|FBtr0076777|FBtr0300500|FBtr0306535|FBtr0076776|FBtr0346536 7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7811456|7814335|7811913 7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 3L - 7814927 7814971 3'utr Pdp1 FlyBase G26587.1 GTTATACATTTGAGTTACATTTACCTGCATACAATTATATAGAAA 101 7814952 0.727914561 4 96 769 0.953947368 1.559308011 0.513157895 0.306930693 0.539473684 101 4 3 145 3L:7814927-7814971 6 123.5 2758 FBgn0016694 2143.56 56.17 86.44 0.057614436 2.198682571 1.428736696 2 2 2 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3L 7815088 7815094 - 3L_7815088_7815094_- 0.521223841 0.521223855 0.521223848 7.07E-08 Pdp1 FBtr0076775|FBtr0076777|FBtr0306535|FBtr0300500|FBtr0346536|FBtr0076776|FBtr0076782|FBtr0332082|FBtr0332081|FBtr0076780|FBtr0332083|FBtr0332080|FBtr0300499 7814335|7814335|7811456|7814335|7811913|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335 7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325 3L - 7815066 7815117 3'utr Pdp1 FlyBase G35134.1 CAAGAAAAAACTATTTCTTTTGGTGTGATTTGCAAGATCTTAAACAAACAAT 18 7815088 0.912340412 7 17 176 0.96 1.380211242 0.28 0.222222222 0.44 18 1 0 24 3L:7815066-7815117 7 Pdp1 FBtr0332080|FBtr0076782|FBtr0076780|FBtr0332082|FBtr0332081|FBtr0332083|FBtr0300499|FBtr0076775|FBtr0076777|FBtr0300500|FBtr0306535|FBtr0076776|FBtr0346536 7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7811456|7814335|7811913 7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 7815069 7815114 3'utr Pdp1 FlyBase G26588.1 GAAAAAACTATTTCTTTTGGTGTGATTTGCAAGATCTTAAACAAAC 12 7815088 0.67966725 7 12 110 1 1.204119983 0.3125 0.333333333 0.5 12 0 0 16 3L:7815069-7815114 7 15 2759 FBgn0016694 2143.56 56.17 86.44 0.006997705 0.267046466 0.173530773 -6 -6 -6 0.1 dme-miR-1008-3p 8mer-A1 AGCTGTGA 3L 7896274 7896281 - 3L_7896274_7896281_- 0.448017589 0.43754056 0.442779074 0.007408358 pbl FBtr0076771|FBtr0076774|FBtr0076773|FBtr0112817|FBtr0076772|FBtr0306647 7896107|7896107|7896107|7896107|7896107|7896107 7896723|7896723|7896723|7896723|7896723|7896723 3L - 7896256 7896308 3'utr pbl FlyBase G35156.1 CGGTCGGATGATCGCCACACCGCAACAAGCTGTGAATGTTTACTGAGTAAATT 45 7896272 0.693468466 4 44 237 1 1.716003344 0.115384615 0.133333333 0.25 45 0 0 52 3L:7896256-7896308 8 pbl FBtr0076772|FBtr0306647|FBtr0076773|FBtr0112817|FBtr0076771|FBtr0076774 7896107|7896107|7896107|7896107|7896107|7896107 7896723|7896723|7896723|7896723|7896723|7896723 AGCTGTGA 8mer-A1 dme-miR-1008-3p 3L - 7896254 7896304 3'utr pbl FlyBase G26601.1 CGGATGATCGCCACACCGCAACAAGCTGTGAATGTTTACTGAGTAAATTTT 25 7896272 0.838594826 5 25 118 1 1.544068044 0.285714286 0.32 0.514285714 25 0 0 35 3L:7896254-7896304 8 34 2760 FBgn0003041 731.33 22.66666667 34.57666667 0.04649064 1.5 0.983322086 -9 -9 -9 0.1 dme-miR-1012-3p 6mer2-7 TGACTA 3L 7896355 7896360 - 3L_7896355_7896360_- 0.984638813 0.999999572 0.992319193 0.010861726 pbl FBtr0076771|FBtr0076774|FBtr0076773|FBtr0112817|FBtr0076772|FBtr0306647 7896107|7896107|7896107|7896107|7896107|7896107 7896723|7896723|7896723|7896723|7896723|7896723 3L - 7896340 7896379 3'utr pbl FlyBase G35157.1 AATCAACTACTCATTGCAGTGACTAGGGATCGAATTCACG 9 7896366 0.727135316 6 9 48 1 1.041392685 0.090909091 0.111111111 0.272727273 9 0 0 11 3L:7896340-7896379 6 pbl FBtr0076772|FBtr0306647|FBtr0076773|FBtr0112817|FBtr0076771|FBtr0076774 7896107|7896107|7896107|7896107|7896107|7896107 7896723|7896723|7896723|7896723|7896723|7896723 TGACTA 6mer2-7 dme-miR-1012-3p 3L - 7896335 7896478 3'utr pbl FlyBase G26602.1 AGCGTTTGCCCGAGCTGTCGATTGATCATGATTAACTTGTAAATAGTTCTCCATATGTGTACTCCCGTGCCCGTATAATTGTGTCGCGTCGCTAAATGTAATCAACTACTCATTGCAGTGACTAGGGATCGAATTCACGCACGC 31 7896366 0.977227081 13 31 210 1 1.681241237 0.25 0.451612903 0.645833333 31 0 0 48 3L:7896335-7896478 6 9 2761 FBgn0003041 731.33 22.66666667 34.57666667 0.012306346 0.397058824 0.26029114 6 6 6 0.1 dme-miR-277-3p 6mer2-7 GCATTT 3L 7913706 7913711 - 3L_7913706_7913711_- 0.999016144 0.9940351 0.996525622 0.003522099 CG8111 FBtr0076770 7913662 7913785 3L - 7913670 7913748 3'utr CG8111 FlyBase G35170.1 ATTTATTGTTGATTTTCATTGTTGAGCCAAATTGATCGCATTTGCCATTTATCCCTCGGCCAATAAAAACTTAACACTT 11 7913717 0.985535566 7 11 86 1 1.113943352 0.153846154 0.090909091 0.230769231 11 0 0 13 3L:7913670-7913748 6 CG8111 FBtr0076770 7913662 7913785 GCATTT 6mer2-7 dme-miR-277-3p 3L - 7913702 7913728 3'utr CG8111 FlyBase G26614.1 GTTGAGCCAAATTGATCGCATTTGCCA 7 7913716 0.937652003 3 6 38 0.916666667 1.041392685 0.666666667 0.428571429 0.666666667 7 1 0 11 3L:7913702-7913728 6 7 2762 FBgn0035825 99.28 9.136666667 13.99333333 0.070507655 0.766143743 0.500238209 6 5 5.5 0.1 dme-miR-980-3p 6mer3-8 GGCAGC 3L 7926341 7926346 - 3L_7926341_7926346_- 0.99983623 0.99985183 0.99984403 1.10E-05 syd FBtr0332791|FBtr0300412|FBtr0332790|FBtr0345912|FBtr0332787|FBtr0332788|FBtr0076769|FBtr0332789|FBtr0300413|FBtr0332792 7926023|7926023|7926023|7916648|7926023|7926023|7926023|7926023|7926023|7926023 7926733|7926830|7926830|7926733|7926830|7926733|7926733|7927563|7926733|7927563 3L - 7926331 7926392 3'utr syd FlyBase G35174.1 TATATATATAATAAGATTGAAATTTGTAAATTTTATGCGCTCTCCTGGCAGCAAGTTATGTA 34 7926347 0.911096467 5 32 179 0.909090909 1.602059991 0.454545455 0.264705882 0.431818182 34 4 0 40 3L:7926331-7926392 6 syd FBtr0332788|FBtr0076769|FBtr0300413|FBtr0332792|FBtr0345912|FBtr0332789|FBtr0332787|FBtr0300412|FBtr0332790|FBtr0332791 7926023|7926023|7926023|7926023|7916648|7926023|7926023|7926023|7926023|7926023 7926733|7926733|7926733|7927563|7926733|7927563|7926830|7926830|7926830|7926733 GGCAGC 6mer3-8 dme-miR-980-3p 3L - 7926329 7926365 3'utr syd FlyBase G26619.1 AAATTTTATGCGCTCTCCTGGCAGCAAGTTATGTATT 29 7926347 0.898375437 2 28 144 0.931818182 1.612783857 0.5 0.379310345 0.590909091 29 3 0 41 3L:7926329-7926365 6 28.5 2763 FBgn0024187 713.5033333 16.67666667 25.62333333 0.039943752 1.708974615 1.112267465 1 1 1 0.1 dme-miR-999-3p 6mer3-8 AGTTAA 3L 7926534 7926539 - 3L_7926534_7926539_- 0.771419693 0.929348044 0.850383868 0.111672172 syd FBtr0332791|FBtr0300412|FBtr0332790|FBtr0345912|FBtr0332787|FBtr0332788|FBtr0076769|FBtr0332789|FBtr0300413|FBtr0332792 7926023|7926023|7926023|7916648|7926023|7926023|7926023|7926023|7926023|7926023 7926733|7926830|7926830|7926733|7926830|7926733|7926733|7927563|7926733|7927563 3L - 7926532 7926581 3'utr syd FlyBase G35175.1 AAAAACTACCACGATGACAAAATGGGTTCTATAAAATAATTTAGTTAAAC 13 7926559 0.819991258 5 12 87 0.928571429 1.113943352 0.571428571 0.076923077 0.142857143 13 1 0 13 3L:7926532-7926581 6 syd FBtr0332788|FBtr0076769|FBtr0300413|FBtr0332792|FBtr0345912|FBtr0332789|FBtr0332787|FBtr0300412|FBtr0332790|FBtr0332791 7926023|7926023|7926023|7926023|7916648|7926023|7926023|7926023|7926023|7926023 7926733|7926733|7926733|7927563|7926733|7927563|7926830|7926830|7926830|7926733 AGTTAA 6mer3-8 dme-miR-999-3p 3L - 7926532 7926586 3'utr syd FlyBase G26620.1 ACCTTAAAAACTACCACGATGACAAAATGGGTTCTATAAAATAATTTAGTTAAAC 9 7926556 0.921162287 4 9 69 1 1.113943352 0.153846154 0.222222222 0.461538462 9 0 0 13 3L:7926532-7926586 6 3 2764 FBgn0024187 713.5033333 16.67666667 25.62333333 0.004204605 0.179892065 0.117080786 20 17 18.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 7972314 7972319 + 3L_7972314_7972319_+ 1 0.999999922 0.999999961 7.07E-08 RNaseX25 FBtr0076752|FBtr0076752|FBtr0076752 7971844|7971844|7971844 7972449|7972449|7972449 3L + 7972295 7972325 3'utr RNaseX25 FlyBase G28552.1 AAACTCATATATACTATTTCTGTGACGATTA 6 7972311 0.722315116 2 6 61 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 3L:7972295-7972325 6 RNaseX25 FBtr0076752|FBtr0076752|FBtr0076752 7971844|7971844|7971844 7972449|7972449|7972449 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 7972302 7972337 3'utr RNaseX25 FlyBase G21608.1 TATATACTATTTCTGTGACGATTACCTAATTGTTCT 5 7972323 0.855476523 2 4 46 0.833333333 0.698970004 0 0.2 0.333333333 5 1 0 5 3L:7972302-7972337 6 5.5 2765 FBgn0010406 524.1133333 38.16 57.97666667 0.010493914 0.144129979 0.094865751 3 -9 -3 0.1 dme-miR-1008-3p 6mer3-8 AGCTGT 3L 7972378 7972383 + 3L_7972378_7972383_+ 0.999968044 0.999993827 0.999980936 1.82E-05 RNaseX25 FBtr0076752 7971844 7972449 3L + 7972378 7972421 3'utr RNaseX25 FlyBase G28553.1 AGCTGTCCAATCATACTGTATCTCTTACTAGTTACTAAGATCAC 39 7972402 0.648500422 7 35 400 0.886363636 1.591064607 0 0.128205128 0.227272727 39 5 0 39 3L:7972378-7972421 5 RNaseX25 FBtr0076752 7971844 7972449 AGCTGT 6mer3-8 dme-miR-1008-3p 3L + 7972381 7972419 3'utr RNaseX25 FlyBase G21609.1 TGTCCAATCATACTGTATCTCTTACTAGTTACTAAGATC 16 7972393 0.725139427 5 13 158 0.842105263 1.204119983 0.052631579 0.1875 0.315789474 16 3 0 16 3L:7972381-7972419 2 2 2766 FBgn0010406 524.1133333 38.16 57.97666667 0.003815969 0.052410901 0.034496637 -24 -15 -19.5 0.1 dme-miR-304-5p 7mer-m8 TGAGATT 3L 7977838 7977844 - 3L_7977838_7977844_- 0.620188144 0.620182442 0.620185293 4.03E-06 CG8038 FBtr0076763 7977803 7977984 3L - 7977805 7977983 3'utr CG8038 FlyBase G35208.1 AACTACAGGACCAATCATTAGCCATAGAAATTGAATCCTATTGTAATTTAAGGAAAAAAGTTTATTGGAAAGTTAGCATCGCTTTTCAATAGAAATTTAATAATTGCCCTCAAAGATCCTCTAAAACTTTACTTGTATTTGAGATTGTTGTGTTTAATATATATATAAAACCGTACATT 34 7977845 0.988159393 21 32 302 0.909090909 1.124938737 0.159090909 0.205882353 0.386363636 34 2 2 40 3L:7977805-7977983 7 CG8038 FBtr0076763 7977803 7977984 TGAGATT 7mer-m8 dme-miR-304-5p 3L - 7977810 7977882 3'utr CG8038 FlyBase G26638.1 AATTGCCCTCAAAGATCCTCTAAAACTTTACTTGTATTTGAGATTGTTGTGTTTAATATATATATAAAACCGT 16 7977846 0.986385513 10 16 142 1 1.414973348 0.153846154 0.5 0.692307692 16 0 0 26 3L:7977810-7977882 7 11.5 2767 FBgn0035831 191 28.52666667 43.6 0.060209424 0.403131573 0.263761468 1 2 1.5 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG 3L 8087780 8087785 - 3L_8087780_8087785_- 0.999264792 0.774651029 0.88695791 0.158825941 CG7565 FBtr0076738 8087633 8087997 3L - 8087650 8087804 3'utr CG7565 FlyBase G35223.1 TATATTATTTTAAGCTGCTGCTGTGCAACAAGTATTATATTTAATGTTTATTTCTACTGCGATACTTTTTATGTGTGTATATAGACATAGCTGTTCACAATCAATGTAACAAACGACATGTAACTGCTTAAAAGTGCATTATTACCCACATTAAA 75 8087787 0.990295055 26 72 728 0.964705882 1.913813852 0.141176471 0.12 0.223529412 75 3 0 82 3L:8087650-8087804 6 CG7565 FBtr0076738 8087633 8087997 GCTGTG 6mer2-7 dme-miR-1008-3p 3L - 8087676 8087803 3'utr CG7565 FlyBase G26650.1 ATATTATTTTAAGCTGCTGCTGTGCAACAAGTATTATATTTAATGTTTATTTCTACTGCGATACTTTTTATGTGTGTATATAGACATAGCTGTTCACAATCAATGTAACAAACGACATGTAACTGCTT 41 8087787 0.904267131 19 39 414 0.947368421 1.73239376 0.140350877 0.341463415 0.526315789 41 3 0 54 3L:8087676-8087803 6 27.5 2768 FBgn0035833 598.6666667 19.29666667 29.46666667 0.045935412 1.4251166 0.933257919 2 2 2 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 8087922 8087928 - 3L_8087922_8087928_- 0.782387417 0.776975107 0.779681262 0.003827074 CG7565 FBtr0076738|FBtr0076738|FBtr0076738 8087633|8087633|8087633 8087997|8087997|8087997 3L - 8087806 8087967 3'utr CG7565 FlyBase G35224.1 AAATATGTGTGTGTGTTAGTCGATCTACTATACCGTGTGTGTGATATCTATTTGTATTTCTATAATGTACTCGGATCTTTTGTACTTTCCGCAAAACTCGTCTGAAGTCAAGTTGTCTATAAGTTCCTTTACGTGCAATTATTTTAAGTTAAGAGTCATTCT 110 8087930 0.808693797 30 105 1077 0.955882353 2.113943352 0.132352941 0.209090909 0.360294118 110 6 0 130 3L:8087806-8087967 7 CG7565 FBtr0076738|FBtr0076738|FBtr0076738 8087633|8087633|8087633 8087997|8087997|8087997 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 8087808 8087944 3'utr CG7565 FlyBase G26651.1 TCTACTATACCGTGTGTGTGATATCTATTTGTATTTCTATAATGTACTCGGATCTTTTGTACTTTCCGCAAAACTCGTCTGAAGTCAAGTTGTCTATAAGTTCCTTTACGTGCAATTATTTTAAGTTAAGAGTCATT 70 8087930 0.923504311 17 66 659 0.962962963 1.716003344 0.037037037 0.428571429 0.62962963 70 3 1 104 3L:8087808-8087944 7 52.5 2769 FBgn0035833 598.6666667 19.29666667 29.46666667 0.087694878 2.720677146 1.781674208 2 2 2 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3L 8105838 8105843 + 3L_8105838_8105843_+ 0.798698078 0.646686499 0.722692288 0.107488433 Ect4 FBtr0304994 8105751 8108836 3L + 8105740 8105878 stop_codon Ect4 FlyBase G28596.1 GGCTCCAGCGTAGAGTGAGCCAAGTTATGCTAACGATTTACAGAGCTAGCCAACTCGAATATGTTCTAGGCTTAAGCAGAGATCCTCAAGTCACACTCTCTAGTACAACTCTCTCTCACTTTCTACCCCCACCCATACA 85 8105840 0.984608114 19 70 557 0.833333333 1.057991947 0.0625 0.105882353 0.208333333 85 10 6 80 3L:8105740-8105878 6 Ect4 FBtr0304994 8105751 8108836 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 8105795 8105870 3'utr Ect4 FlyBase G21642.1 CGAATATGTTCTAGGCTTAAGCAGAGATCCTCAAGTCACACTCTCTAGTACAACTCTCTCTCACTTTCTACCCCCA 36 8105840 0.781684767 10 29 253 0.829787234 0.989004616 0.063829787 0.222222222 0.404255319 36 5 3 39 3L:8105795-8105870 6 40.5 2770 FBgn0262579 2855.543333 63.41666667 97.15666667 0.01418294 0.638633377 0.416852506 -2 -2 -2 0.1 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 8106012 8106018 + 3L_8106012_8106018_+ 0.823348673 0.823348021 0.823348347 4.95E-07 Ect4 FBtr0304994 8105751 8108836 3L + 8105885 8106045 3'utr Ect4 FlyBase G28597.1 ACTTTCTCACTCAACTCAAGCAACCCATTACAACTACACTATCCATTACTCTTTACTCTTACCAATTAATAATTGATTTAATTCTGATTGCCACACACTCGAAATCGCTTGAAACGCCGTCTCATGCGCAGCTAATCACCAGGCAAATAGGTACCGCCAAT 55 8106009 0.913930648 15 52 347 0.951612903 1.469822016 0.080645161 0.109090909 0.209677419 55 2 1 59 3L:8105885-8106045 7 Ect4 FBtr0304994 8105751 8108836 GCAGCTA 7mer-A1 dme-miR-980-3p 3L + 8105885 8106039 3'utr Ect4 FlyBase G21643.1 ACTTTCTCACTCAACTCAAGCAACCCATTACAACTACACTATCCATTACTCTTTACTCTTACCAATTAATAATTGATTTAATTCTGATTGCCACACACTCGAAATCGCTTGAAACGCCGTCTCATGCGCAGCTAATCACCAGGCAAATAGGTACC 34 8106009 0.987127491 16 28 244 0.777777778 1.544068044 0.155555556 0.303030303 0.488888889 33 10 0 35 3L:8105885-8106039 7 15 2771 FBgn0262579 2855.543333 63.41666667 97.15666667 0.005252941 0.23653088 0.154389817 3 3 3 0.1 dme-miR-995-5p 6mer2-7 ATTCGG 3L 8113843 8113848 - 3L_8113843_8113848_- 0.999998455 0.993503199 0.996750827 0.004592871 Arp3 FBtr0076737|FBtr0334087 8113405|8113803 8113955|8113955 3L - 8113816 8113897 3'utr Arp3 FlyBase G35232.1 TGATTTATTGATTTATTCTCCAACTATATATATATATATATACATTGCGATTCGGTATTCCACGCTAAAGTATTAGTAATTA 18 8113848 0.736109722 7 17 182 0.95 1.278753601 0.15 0.111111111 0.2 18 1 0 19 3L:8113816-8113897 6 Arp3 FBtr0076737|FBtr0334087 8113405|8113803 8113955|8113955 ATTCGG 6mer2-7 dme-miR-995-5p 3L - 8113820 8113864 3'utr Arp3 FlyBase G26657.1 ATATATATACATTGCGATTCGGTATTCCACGCTAAAGTATTAGTA 6 8113853 0.995568262 3 4 38 0.777777778 0.84509804 0.222222222 0.5 0.666666667 6 2 0 7 3L:8113820-8113864 6 9 2772 FBgn0262716 1345.763333 82.36666667 125.8 0.006687654 0.109267503 0.07154213 0 5 2.5 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 3L 8123643 8123648 - 3L_8123643_8123648_- 1 1 1 0 CG7550 FBtr0076736 8123610 8123736 3L - 8123630 8123668 3'utr CG7550 FlyBase G35244.1 CGTATCAGCCAAGTATCTTCTGTGTTATTTAAATAAAAT 16 8123650 0.65486311 8 14 177 0.875 0.669006781 0.0625 0 0 16 0 2 14 3L:8123630-8123668 6 CG7550 FBtr0076736 8123610 8123736 TGTGTT 6mer3-8 dme-miR-317-3p 3L - 8123630 8123664 3'utr CG7550 FlyBase G26668.1 TCAGCCAAGTATCTTCTGTGTTATTTAAATAAAAT 9 8123650 0.613164019 6 8 89 0.714285714 1 0.285714286 0.333333333 0.571428571 9 4 0 10 3L:8123630-8123664 6 12.5 2773 FBgn0035839 38.33333333 5.32 8.246666667 0.326086957 2.34962406 1.515763945 2 2 2 0.1 dme-miR-92b-3p 7mer-m8 GTGCAAT 3L 8131118 8131124 + 3L_8131118_8131124_+ 0.659000077 0.659000077 0.659000077 0 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 3L + 8131095 8131133 3'utr CdsA FlyBase G28656.1 TTTATTTGGCAGAACTCTACACAGTGCAATCGTATTGTT 6 8131112 0.685221027 5 6 38 1 0.77815125 0 0 0 6 0 0 6 3L:8131095-8131133 7 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 GTGCAAT 7mer-m8 dme-miR-92b-3p 3L + 8131096 8131146 3'utr CdsA FlyBase G21697.1 TTATTTGGCAGAACTCTACACAGTGCAATCGTATTGTTAAGCGATTCCATT 8 8131128 0.623481819 7 8 59 1 1.113943352 0.230769231 0.5 0.692307692 8 0 0 13 3L:8131096-8131146 7 6 2774 FBgn0010350 708.1033333 35.43 53.93 0.00847334 0.16934801 0.111255331 6 -10 -2 0.1 dme-miR-1006-3p 7mer-A1 GAATTTA 3L 8131200 8131206 + 3L_8131200_8131206_+ 0.823345297 0.822862544 0.823103921 0.000341391 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 3L + 8131151 8131248 3'utr CdsA FlyBase G28657.1 TTAATGCCCTCGTGACAAGGCGTCAAGGCAAGGCAAACAGAATAACTATGAATTTAATATCGACTATGTGTGTGTGCGTGTTGTTAGTGAATTTAATT 39 8131218 0.956039278 15 36 306 0.913043478 1.62324929 0.195652174 0.153846154 0.282608696 39 4 0 42 3L:8131151-8131248 7 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 GAATTTA 7mer-A1 dme-miR-1006-3p 3L + 8131169 8131279 3'utr CdsA FlyBase G21698.1 GGCGTCAAGGCAAGGCAAACAGAATAACTATGAATTTAATATCGACTATGTGTGTGTGCGTGTTGTTAGTGAATTTAATTACGATAACTATAGCTTAGAGATGATCAGGCA 26 8131218 0.988859788 11 23 210 0.87755102 1.633468456 0.306122449 0.615384615 0.795918367 26 6 0 43 3L:8131169-8131279 7 13.5 2775 FBgn0010350 708.1033333 35.43 53.93 0.019065014 0.381033023 0.250324495 -18 -18 -18 0.1 dme-miR-33-5p 6mer3-8 CAATGC 3L 8131378 8131383 + 3L_8131378_8131383_+ 0.93686268 0.974178407 0.955520543 0.026386185 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 3L + 8131314 8131406 3'utr CdsA FlyBase G28659.1 AGCGCATTTTAGTTAAATACCTGAGGGACGAAATTATGAGATCAAGATACCAGGAAAACTCTTGCAATGCTGTAATTCTATATATAATAGTGC 56 8131381 0.776535826 11 52 343 0.944444444 1.832508913 0.166666667 0.25 0.416666667 56 4 0 68 3L:8131314-8131406 6 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 CAATGC 6mer3-8 dme-miR-33-5p 3L + 8131283 8131409 3'utr CdsA FlyBase G21699.1 AACGCCAGAATCTGGAGATTAGCATAATTAAAGCGCATTTTAGTTAAATACCTGAGGGACGAAATTATGAGATCAAGATACCAGGAAAACTCTTGCAATGCTGTAATTCTATATATAATAGTGCAAT 31 8131381 0.925496026 17 30 216 0.972222222 1.544068044 0.111111111 0.161290323 0.277777778 31 1 0 35 3L:8131283-8131409 6 18.5 2776 FBgn0010350 708.1033333 35.43 53.93 0.02612613 0.522156365 0.343037271 -3 -3 -3 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 3L 8131626 8131632 + 3L_8131626_8131632_+ 0.782911795 0.782911377 0.782911586 2.83E-07 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 3L + 8131577 8131652 3'utr CdsA FlyBase G28661.1 GGCATTTAAGAACGAAAATGCAATTCGTCGGCGTTTTAAAGAACTAAATGTACAAAGATTTCAATATTAAATCTTA 16 8131625 0.963480593 7 15 82 0.952380952 1.301029996 0.285714286 0.3125 0.476190476 16 1 0 20 3L:8131577-8131652 7 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 GTACAAA 7mer-A1 dme-miR-305-5p 3L + 8131587 8131640 3'utr CdsA FlyBase G21700.1 AACGAAAATGCAATTCGTCGGCGTTTTAAAGAACTAAATGTACAAAGATTTCAA 25 8131625 0.95399064 6 24 125 0.966666667 1.462397998 0.066666667 0.2 0.333333333 25 1 0 29 3L:8131587-8131640 7 17.5 2777 FBgn0010350 708.1033333 35.43 53.93 0.024713907 0.493931696 0.324494715 1 1 1 0.1 dme-miR-14-3p 6mer2-7 AGACTG 3L 8131653 8131658 - 3L_8131653_8131658_- 1 1 1 0 CG7504 FBtr0273367|FBtr0273368 8131427|8131427 8131796|8131796 3L - 8131618 8131696 3'utr CG7504 FlyBase G35266.1 AAAAAAGGCTTTGTTATTTTTATATATATTTAACATAGAGACTGTAAGATTTAATATTGAAATCTTTGTACATTTAGTT 29 8131654 0.987865704 10 27 243 0.933333333 1.447158031 0.066666667 0.034482759 0.066666667 29 2 0 28 3L:8131618-8131696 6 CG7504 FBtr0273367|FBtr0273368 8131427|8131427 8131796|8131796 AGACTG 6mer2-7 dme-miR-14-3p 3L - 8131556 8131679 3'utr CG7504 FlyBase G26681.1 TTTTATATATATTTAACATAGAGACTGTAAGATTTAATATTGAAATCTTTGTACATTTAGTTCTTTAAAACGCCGACGAATTGCATTTTCGTTCTTAAATGCCGTACAGTATAACAGGATTTAT 31 8131654 0.98514446 10 27 227 0.888888889 1.602059991 0.111111111 0.290322581 0.511111111 31 5 0 40 3L:8131556-8131679 6 22.5 2778 FBgn0035842 670.3266667 14.32333333 21.90333333 0.033565724 1.570863393 1.027240907 -4 -4 -4 0.1 dme-miR-184-5p 6mer3-8 TGATAA 3L 8170708 8170713 - 3L_8170708_8170713_- 0.999996044 0.999999911 0.999997977 2.76E-06 RecQ4 FBtr0076729 8170638 8170818 3L - 8170704 8170731 3'utr RecQ4 FlyBase G35284.1 ATTTTACTCGCACAAGTCTGATAATACA 8 8170709 0.710080714 3 8 39 1 1 0 0.25 0.4 8 0 0 10 3L:8170704-8170731 6 RecQ4 FBtr0076729 8170638 8170818 TGATAA 6mer3-8 dme-miR-184-5p 3L - 8170699 8170727 3'utr RecQ4 FlyBase G26690.1 TACTCGCACAAGTCTGATAATACAAAAAT 5 8170710 0.647048515 2 5 21 1 0.903089987 0 0.4 0.625 5 0 0 8 3L:8170699-8170727 6 6.5 2779 FBgn0040290 522 12.57 19.37666667 0.012452107 0.517104216 0.335455015 -4 -3 -3.5 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 3L 8176224 8176230 - 3L_8176224_8176230_- 0.619731354 0.620144192 0.619937773 0.000291894 Nmt FBtr0076728 8176133 8176425 3L - 8176192 8176277 3'utr Nmt FlyBase G35292.1 GGAAAGCCCTTTGCGAGCATACACCTAAATAGCATCATTGTGAAAATTGCATTTTGCAACGGCCAAGCTTCGATATTTTTTACTAC 25 8176240 0.978805433 12 23 159 0.931034483 1.431363764 0.103448276 0.16 0.275862069 25 2 0 27 3L:8176192-8176277 7 Nmt FBtr0076728 8176133 8176425 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 8176197 8176253 3'utr Nmt FlyBase G26696.1 CTAAATAGCATCATTGTGAAAATTGCATTTTGCAACGGCCAAGCTTCGATATTTTTT 14 8176240 0.972144641 5 12 95 0.952380952 1 0 0.357142857 0.571428571 14 0 1 20 3L:8176197-8176253 7 15 2780 FBgn0020392 364.3333333 24.34666667 37.14333333 0.041171089 0.616100767 0.403840976 10 10 10 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3L 8182762 8182768 + 3L_8182762_8182768_+ 0.661253743 0.658624465 0.659939104 0.001859125 CG7979 FBtr0076690 8182719 8183369 3L + 8182722 8182779 3'utr CG7979 FlyBase G28669.1 ATTAATTGGGCTTAGCTCTAATTGGTGATGATGGAACGTCTCTAGTCTGCAAATGTAA 31 8182769 0.972768601 3 30 211 0.976744186 1.62324929 0.186046512 0.290322581 0.488372093 31 1 0 42 3L:8182722-8182779 7 CG7979 FBtr0076690 8182719 8183369 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 8182714 8182773 stop_codon CG7979 FlyBase G21706.1 ACCGTAGAATTAATTGGGCTTAGCTCTAATTGGTGATGATGGAACGTCTCTAGTCTGCAA 32 8182769 0.972221591 3 32 193 1 1.672097858 0.063829787 0.34375 0.553191489 32 0 0 47 3L:8182714-8182773 7 26.5 2781 FBgn0035848 289.3333333 16.77666667 25.67333333 0.091589862 1.579574806 1.032199429 -7 -7 -7 0.1 dme-miR-33-5p 7mer-m1 AATGCAC 3L 8182913 8182919 + 3L_8182913_8182919_+ 0.829692068 0.825757785 0.827724926 0.00278197 CG7979 FBtr0076690 8182719 8183369 3L + 8182849 8182931 3'utr CG7979 FlyBase G28671.1 TTGAAGTTTTGCGATATATCAGCCTATGTATGGATTAGGAAATAGTGATGTATAAATGCGATCAAATGCACTGAATTCTAGAA 13 8182920 0.978519724 8 13 91 1 1.204119983 0.125 0.153846154 0.3125 13 0 0 16 3L:8182849-8182931 7 CG7979 FBtr0076690 8182719 8183369 AATGCAC 7mer-m1 dme-miR-33-5p 3L + 8182867 8182926 3'utr CG7979 FlyBase G21708.1 TCAGCCTATGTATGGATTAGGAAATAGTGATGTATAAATGCGATCAAATGCACTGAATTC 9 8182920 0.982893126 3 7 55 0.857142857 0.77815125 0.142857143 0.333333333 0.571428571 9 1 1 12 3L:8182867-8182926 7 8 2782 FBgn0035848 289.3333333 16.77666667 25.67333333 0.02764977 0.476852772 0.311607375 -7 -7 -7 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 8190590 8190595 + 3L_8190590_8190595_+ 0.999998206 0.999999801 0.999999003 1.13E-06 Atg18a FBtr0321321|FBtr0076693|FBtr0321320|FBtr0076692|FBtr0076691|FBtr0321319|FBtr0346547 8189976|8189976|8190267|8189976|8189976|8190267|8189976 8190714|8191118|8190965|8190714|8190714|8190714|8190714 3L + 8190568 8190696 3'utr Atg18a FlyBase G28679.1 CGTTCCTGGCGCTGCCATTGGAATGTGAAATGCTTTTGTCATACACTCCTAAGTTAGTTGTTAATTAATAATTTAGACGGATTTACAGATTCGCTTTGATATTTGAGTTGCCAGCTTTTTATACAAAAT 57 8190604 0.83097122 21 56 525 1 1.806179974 0.21875 0.122807018 0.21875 57 0 0 64 3L:8190568-8190696 6 Atg18a FBtr0346547|FBtr0076691|FBtr0321319|FBtr0321320|FBtr0076692|FBtr0321321|FBtr0076693 8189976|8189976|8190267|8190267|8189976|8189976|8189976 8190714|8190714|8190714|8190965|8190714|8190714|8191118 ATGTGA 6mer3-8 dme-miR-1003-3p 3L + 8190558 8190633 3'utr Atg18a FlyBase G21716.1 TTTAAGCCTCCGTTCCTGGCGCTGCCATTGGAATGTGAAATGCTTTTGTCATACACTCCTAAGTTAGTTGTTAATT 35 8190603 0.935417665 10 35 287 1 1.748188027 0.232142857 0.428571429 0.642857143 35 0 0 56 3L:8190558-8190633 6 28 2783 FBgn0035850 441.6666667 25.08666667 38.37666667 0.063396226 1.116130747 0.729610006 -14 -13 -13.5 0.1 dme-miR-283-5p 8mer-m1 TGATATTT 3L 8190664 8190671 + 3L_8190664_8190671_+ 0.5555773 0.555538694 0.555557997 2.73E-05 Atg18a FBtr0321321|FBtr0076693|FBtr0321320|FBtr0076692|FBtr0076691|FBtr0321319|FBtr0346547 8189976|8189976|8190267|8189976|8189976|8190267|8189976 8190714|8191118|8190965|8190714|8190714|8190714|8190714 3L + 8190568 8190696 3'utr Atg18a FlyBase G28679.1 CGTTCCTGGCGCTGCCATTGGAATGTGAAATGCTTTTGTCATACACTCCTAAGTTAGTTGTTAATTAATAATTTAGACGGATTTACAGATTCGCTTTGATATTTGAGTTGCCAGCTTTTTATACAAAAT 57 8190658 0.83097122 21 56 525 1 1.806179974 0.21875 0.122807018 0.21875 57 0 0 64 3L:8190568-8190696 8 Atg18a FBtr0346547|FBtr0076691|FBtr0321319|FBtr0321320|FBtr0076692|FBtr0321321|FBtr0076693 8189976|8189976|8190267|8190267|8189976|8189976|8189976 8190714|8190714|8190714|8190965|8190714|8190714|8191118 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 8190634 8190674 3'utr Atg18a FlyBase G21717.1 AATAATTTAGACGGATTTACAGATTCGCTTTGATATTTGAG 24 8190657 0.982836463 5 24 195 1 1.612783857 0.097560976 0.5 0.707317073 24 0 0 41 3L:8190634-8190674 8 23.5 2784 FBgn0035850 441.6666667 25.08666667 38.37666667 0.053207547 0.936752591 0.612351255 6 7 6.5 0.1 dme-miR-968-5p 6mer2-7 CTACTT 3L 8191053 8191058 + 3L_8191053_8191058_+ 0.672753929 0.624602004 0.648677967 0.034048535 Atg18a FBtr0076693 8189976 8191118 3L + 8191030 8191076 3'utr Atg18a FlyBase G28680.1 AGTTTACAAATGAAACTCATACGCTACTTTATTGTATTCAATAAATT 21 8191058 0.728716113 6 21 185 1 1.397940009 0 0.19047619 0.32 21 0 0 25 3L:8191030-8191076 6 Atg18a FBtr0076693 8189976 8191118 CTACTT 6mer2-7 dme-miR-968-5p 3L + 8191030 8191070 3'utr Atg18a FlyBase G21718.1 AGTTTACAAATGAAACTCATACGCTACTTTATTGTATTCAA 15 8191058 0.648308209 5 15 112 1 1.397940009 0.04 0.333333333 0.6 15 0 0 25 3L:8191030-8191070 6 17 2785 FBgn0035850 441.6666667 25.08666667 38.37666667 0.038490566 0.677650811 0.442977504 -5 -5 -5 0.1 dme-miR-34-5p 6mer3-8 CACTGC 3L 8196599 8196604 - 3L_8196599_8196604_- 0.993956283 0.998847068 0.996401676 0.003458318 UbcE2M FBtr0332139|FBtr0076722|FBtr0332138 8195845|8196531|8196531 8196739|8196739|8196739 3L - 8196580 8196648 3'utr UbcE2M FlyBase G35302.1 AACATCGGCGACAACAAATTATTGTAATAAACGAAAACAAAATCCACTGCGTGCAAAGAAGAAGCCGAG 9 8196601 0.820733226 3 9 20 1 1.079181246 0 0.222222222 0.416666667 9 0 0 12 3L:8196580-8196648 6 UbcE2M FBtr0332138|FBtr0332139|FBtr0076722 8196531|8195845|8196531 8196739|8196739|8196739 CACTGC 6mer3-8 dme-miR-34-5p 3L - 8196588 8196630 3'utr UbcE2M FlyBase G26709.1 TTATTGTAATAAACGAAAACAAAATCCACTGCGTGCAAAGAAG 10 8196601 0.768665859 3 9 32 0.9375 1.176091259 0 0.4 0.625 10 1 0 15 3L:8196588-8196630 6 7.5 2786 FBgn0035853 344.1466667 39.61666667 60.33 0.021793034 0.189314262 0.124316261 -3 -3 -3 0.1 dme-miR-34-5p 6mer2-7 ACTGCC 3L 826829 826834 - 3L_826829_826834_- 0.999999655 0.999999743 0.999999699 0 CG13900 FBtr0331404|FBtr0072597 826718|826718 830720|827877 3L - 826717 826874 3'utr CG13900 FlyBase G33124.1 ATACTAACTGCACATTAAATCACCGATCAACCACTAATCGACTGCCGCATATTTAAACTAGCATATAAGTCAGTGCAAACTCGACAAATTGCACAACCTAAATATAAACCCCTAATCATAAGCAATTTTTAACTTAAATAAAAGTAACTGAAAACAAA 753 826837 0.772646782 25 721 3085 0.959954233 1.923761961 0.177345538 0.139442231 0.258581236 753 26 9 839 3L:826717-826874 6 CG13900 FBtr0072597|FBtr0331404 826718|826718 827877|830720 ACTGCC 6mer2-7 dme-miR-34-5p 3L - 826751 826872 3'utr CG13900 FlyBase G25063.1 ACTAACTGCACATTAAATCACCGATCAACCACTAATCGACTGCCGCATATTTAAACTAGCATATAAGTCAGTGCAAACTCGACAAATTGCACAACCTAAATATAAACCCCTAATCATAAGCA 388 826838 0.947575908 17 359 1522 0.928455285 1.853546121 0.22601626 0.412371134 0.629268293 388 37 7 571 3L:826751-826872 6 515 2787 FBgn0035162 4015.156667 113.57 173.3966667 0.128263986 4.534648235 2.970068629 3 4 3.5 0.1 dme-miR-307a-3p 6mer2-7 GTTGTG 3L 826976 826981 - 3L_826976_826981_- 1 0.999999983 0.999999992 0 CG13900 FBtr0331404|FBtr0072597 826718|826718 830720|827877 3L - 826950 827003 intron-3'utr CG13900 FlyBase G33125.1 AGATCTTCTTACGTTGGGGTATGTTGTGGCGCTTAATTCTAACTAAATTATACA 12 826979 0.988546395 7 12 114 1 1.113943352 0.230769231 0.083333333 0.153846154 12 0 0 13 3L:826950-827003 6 CG13900 FBtr0072597|FBtr0331404 826718|826718 827877|830720 GTTGTG 6mer2-7 dme-miR-307a-3p 3L - 826954 827003 intron-3'utr CG13900 FlyBase G25064.1 AGATCTTCTTACGTTGGGGTATGTTGTGGCGCTTAATTCTAACTAAATTA 11 826978 0.982079479 7 11 89 1 1.176091259 0.333333333 0.272727273 0.466666667 11 0 0 15 3L:826954-827003 6 11.5 2788 FBgn0035162 4015.156667 113.57 173.3966667 0.002864147 0.101259135 0.066321921 -2 -3 -2.5 0.1 dme-miR-33-5p 7mer-A1 AATGCAA 3L 8282717 8282723 - 3L_8282717_8282723_- 0.766893462 0.782911824 0.774902643 0.011326649 cert FBtr0345035|FBtr0332136|FBtr0076717 8282526|8282526|8282526 8283085|8283085|8283085 3L - 8282654 8282798 3'utr cert FlyBase G35311.1 TGAAACACAATCATTGTATAGATCTTAGTTCCAAAACTTTCTATCTGTAGTGTATATCTTTATGGAAATGCTTTAAATGCAACAATTGCAAGAATGATGTGAGGGATGCATAGCTACATATACGAAAGCTTTTCTTTTGGTGTGA 29 8282730 0.980490007 12 29 211 1 1.531478917 0.117647059 0.172413793 0.294117647 29 0 0 34 3L:8282654-8282798 7 cert FBtr0345035|FBtr0332136|FBtr0076717 8282526|8282526|8282526 8283085|8283085|8283085 AATGCAA 7mer-A1 dme-miR-33-5p 3L - 8282703 8282750 3'utr cert FlyBase G26720.1 AGTGTATATCTTTATGGAAATGCTTTAAATGCAACAATTGCAAGAATG 7 8282722 0.991769521 4 5 56 0.888888889 0.903089987 0.111111111 0.285714286 0.444444444 7 1 0 8 3L:8282703-8282750 7 10 2789 FBgn0027569 860.3466667 42.59 65.35666667 0.011623222 0.234796901 0.153006579 7 -1 3 0.1 dme-miR-8-3p 7mer-m8 CAGTATT 3L 828503 828509 - 3L_828503_828509_- 0.661211192 0.660508035 0.660859613 0.000497237 CG13900 FBtr0331404 826718 830720 3L - 828441 828590 3'utr CG13900 FlyBase G33133.1 GCGAGAACAAGCACATTCCCTATCAGATTGTCAATATCCAAGCCATGGGTCATCGTGTTTACGTGTCGGATGTTCAGGAATCAGTATTTTTCATACGCTATCGTCGCGCGGAGAACCAGCTGATTATATTTGCCGATGACACGCATCCTC 86 828510 0.986014438 16 77 648 0.897959184 1.643452676 0.204081633 0.127906977 0.234693878 86 9 1 88 3L:828441-828590 7 CG13900 FBtr0331404 826718 830720 CAGTATT 7mer-m8 dme-miR-8-3p 3L - 828474 828617 3'utr CG13900 FlyBase G25066.2 TCGGCAAGAAGAAAATGCTGCGCAAATGCGAGAACAAGCACATTCCCTATCAGATTGTCAATATCCAAGCCATGGGTCATCGTGTTTACGTGTCGGATGTTCAGGAATCAGTATTTTTCATACGCTATCGTCGCGCGGAGAACC 48 828510 0.983336756 13 43 335 0.926470588 1.498310554 0.191176471 0.291666667 0.5 48 4 1 63 3L:828474-828617 7 19 2790 FBgn0035162 4015.156667 113.57 173.3966667 0.004732069 0.167297702 0.109575347 1 1 1 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 3L 828817 828822 - 3L_828817_828822_- 1 0.98899278 0.99449639 0.007783266 CG13900 FBtr0331404 826718 830720 3L - 828807 828866 3'utr CG13900 FlyBase G33135.1 CGATGGCCATGCTGAAGTTCTCCATAGCGGCTGATGGCCGGTACTACCTGGCCGTGGGAA 13 828842 0.755833562 4 13 68 1 1.176091259 0.2 0.153846154 0.266666667 13 0 0 15 3L:828807-828866 6 CG13900 FBtr0331404 826718 830720 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 3L - 828806 828869 3'utr CG13900 FlyBase G25068.1 TGTCGATGGCCATGCTGAAGTTCTCCATAGCGGCTGATGGCCGGTACTACCTGGCCGTGGGAAT 11 828842 0.991478842 4 11 53 1 1.146128036 0.285714286 0.272727273 0.428571429 11 0 0 14 3L:828806-828869 6 5 2791 FBgn0035162 4015.156667 113.57 173.3966667 0.001245281 0.044025711 0.028835618 20 20 20 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 8298258 8298263 + 3L_8298258_8298263_+ 0.999999836 0.999999729 0.999999783 7.07E-08 Rab19 FBtr0076705|FBtr0076705|FBtr0076705|FBtr0331832|FBtr0331832|FBtr0331832 8298223|8298223|8298223|8298223|8298223|8298223 8298506|8298506|8298506|8298506|8298506|8298506 3L + 8298192 8298309 stop_codon Rab19 FlyBase G28696.1 AAGAGTTGCAGCAGCTCATGCAATCTCACCTAGACCTAAATCCGCTCTTTAGTTTGCTTTTACTTTTGTGATCAAATTGTTCTTGTGGCTATATATTAGTATTCTAATGCTTTAACCT 91 8298256 0.960949404 17 82 1009 0.901960784 1.361727836 0.156862745 0.10989011 0.205882353 91 7 3 92 3L:8298192-8298309 6 Rab19 FBtr0331832|FBtr0331832|FBtr0331832|FBtr0076705|FBtr0076705|FBtr0076705 8298223|8298223|8298223|8298223|8298223|8298223 8298506|8298506|8298506|8298506|8298506|8298506 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 8298234 8298301 3'utr Rab19 FlyBase G21730.1 CGCTCTTTAGTTTGCTTTTACTTTTGTGATCAAATTGTTCTTGTGGCTATATATTAGTATTCTAATGC 69 8298256 0.714657309 12 68 762 0.989795918 1.685741739 0.183673469 0.31884058 0.520408163 69 0 1 97 3L:8298234-8298301 6 63.5 2792 FBgn0015793 126.0033333 15.34 23.52333333 0.503954922 4.139504563 2.699447357 2 2 2 0.1 dme-miR-13b-2-5p 8mer-A1 TTTGACGA 3L 8298349 8298356 + 3L_8298349_8298356_+ 0.600402783 0.601217795 0.600810289 0.000576292 Rab19 FBtr0076705|FBtr0331832 8298223|8298223 8298506|8298506 3L + 8298342 8298375 3'utr Rab19 FlyBase G28697.1 ATTTATTTTTGACGATAGAGTACAAACAATCTCA 5 8298356 0.777445187 3 5 28 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 3L:8298342-8298375 8 Rab19 FBtr0331832|FBtr0076705 8298223|8298223 8298506|8298506 TTTGACGA 8mer-A1 dme-miR-13b-2-5p 3L + 8298315 8298379 3'utr Rab19 FlyBase G21731.1 TAGACACTAACTTTTACACAACCATGTATTTATTTTTGACGATAGAGTACAAACAATCTCACACA 7 8298351 0.98568958 6 6 56 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 3L:8298315-8298379 8 5 2793 FBgn0015793 126.0033333 15.34 23.52333333 0.03968149 0.325945241 0.21255491 -7 -2 -4.5 0.1 dme-miR-305-3p 7mer-m1 TGTGCCG 3L 830216 830222 - 3L_830216_830222_- 0.822922941 0.820633129 0.821778035 0.001619133 CG13900 FBtr0331404 826718 830720 3L - 830192 830237 3'utr CG13900 FlyBase G33141.1 ACGCCCACGCTCTGTTGTGCCGCCCTGGGCGATGATGCGCTGGTTC 10 830222 0.836153189 4 10 58 1 1.176091259 0 0.4 0.6 10 0 0 15 3L:830192-830237 7 CG13900 FBtr0331404 826718 830720 TGTGCCG 7mer-m1 dme-miR-305-3p 3L - 830192 830233 3'utr CG13900 FlyBase G25072.1 CCACGCTCTGTTGTGCCGCCCTGGGCGATGATGCGCTGGTTC 5 830212 0.944903561 2 5 28 1 0.954242509 0.555555556 0.4 0.666666667 5 0 0 9 3L:830192-830233 7 7.5 2794 FBgn0035162 4015.156667 113.57 173.3966667 0.001867922 0.066038567 0.043253427 0 -10 -5 0.1 dme-miR-283-5p 8mer-m1 TGATATTT 3L 8302254 8302261 + 3L_8302254_8302261_+ 0.555593841 0.555593839 0.55559384 0 CG13671 FBtr0076706 8302211 8302341 3L + 8302238 8302288 3'utr CG13671 FlyBase G28703.1 AGTTAAAAGTTACCGTTGATATTTCCTGTAGATCGTAAGGCTAAAGTTGTC 28 8302254 0.751566411 7 26 251 0.914285714 1.505149978 0.314285714 0.25 0.4 28 3 0 32 3L:8302238-8302288 8 CG13671 FBtr0076706 8302211 8302341 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 8302238 8302286 3'utr CG13671 FlyBase G21734.1 AGTTAAAAGTTACCGTTGATATTTCCTGTAGATCGTAAGGCTAAAGTTG 16 8302258 0.669530582 7 12 124 0.75862069 1.041392685 0.137931034 0.6875 0.827586207 16 6 1 22 3L:8302238-8302286 8 17.5 2795 FBgn0035867 449.54 23.89 36.41666667 0.038928683 0.732524069 0.480549199 0 -4 -2 0.1 dme-miR-33-5p 6mer2-7 AATGCA 3L 836607 836612 + 3L_836607_836612_+ 0.602367828 0.538948395 0.570658112 0.044844288 CG42554 FBtr0301253 836552 836770 3L + 836579 836651 3'utr CG42554 FlyBase G26909.1 CTTCAACTAATTTGAAAGATCTCGTGGTAATGCAGTGCCCGCTGAGTGGTGATTAGGATTTAATTTTAGGCAC 45 836603 0.639228599 14 41 322 0.890909091 0.991226076 0.254545455 0.222222222 0.363636364 45 2 4 49 3L:836579-836651 6 CG42554 FBtr0301253 836552 836770 AATGCA 6mer2-7 dme-miR-33-5p 3L + 836572 836644 3'utr CG42554 FlyBase G20367.1 TGTAAAACTTCAACTAATTTGAAAGATCTCGTGGTAATGCAGTGCCCGCTGAGTGGTGATTAGGATTTAATTT 34 836603 0.856427737 13 33 242 0.980392157 1.698970004 0.156862745 0.382352941 0.588235294 34 1 0 50 3L:836572-836644 6 24 2796 FBgn0260756 37.16 4.52 6.893333333 0.645855759 5.309734513 3.481624758 4 4 4 0.1 dme-miR-14-3p 6mer3-8 AAGACT 3L 839469 839474 + 3L_839469_839474_+ 0.919470882 0.91916413 0.919317506 0.00021694 CG13887 FBtr0304797|FBtr0072584|FBtr0345588|FBtr0072583 839152|839431|839431|839431 839747|839747|839931|839747 3L + 839446 839513 3'utr CG13887 FlyBase G26916.1 AAGTCCAACATTTAAATAACGATAAGACTTATAAGCATGGCGGTGGGGCAGCGAAAGCAGGCACATTT 389 839482 0.809432961 8 330 1595 0.844444444 2.102662342 0.433333333 0.143958869 0.26 389 68 2 380 3L:839446-839513 6 CG13887 FBtr0072583|FBtr0345588|FBtr0072584|FBtr0304797 839431|839431|839431|839152 839747|839931|839747|839747 AAGACT 6mer3-8 dme-miR-14-3p 3L + 839369 839515 stop_codon CG13887 FlyBase G20372.1 CGAGGAGTACAGCAAGCTGCAGAAGAAGATAACCATCGGCGGAGGCGGAAACAAGGATGATTAAACTCACTGGAGCCAAGTCCAACATTTAAATAACGATAAGACTTATAAGCATGGCGGTGGGGCAGCGAAAGCAGGCACATTTAA 320 839482 0.965389827 15 235 1239 0.738947368 2.068185862 0.412631579 0.35625 0.566315789 320 122 2 351 3L:839369-839515 6 267 2797 FBgn0035165 3558.06 375.0733333 574.87 0.075040893 0.711860792 0.464452833 -13 -13 -13 0.1 dme-bantam-3p 7mer-m8 TGATCTC 3L 840010 840016 - 3L_840010_840016_- 0.661615016 0.661615085 0.661615051 7.07E-08 CG13902 FBtr0331402|FBtr0300712 839978|839978 840057|840057 3L - 839995 840028 3'utr CG13902 FlyBase G33156.1 ATTTATGTAGGATGATCTCTGTTCAAGTTAAGAT 13 840016 0.746872939 3 13 104 1 1.176091259 0.066666667 0.153846154 0.266666667 13 0 0 15 3L:839995-840028 7 CG13902 FBtr0300712|FBtr0331402 839978|839978 840057|840057 TGATCTC 7mer-m8 dme-bantam-3p 3L - 839990 840024 3'utr CG13902 FlyBase G25084.1 ATGTAGGATGATCTCTGTTCAAGTTAAGATTAAAG 6 840016 0.981906274 3 6 41 1 1 0 0.333333333 0.6 6 0 0 10 3L:839990-840024 7 9 2798 FBgn0035166 125.3433333 11.64666667 17.69 0.071802782 0.772753291 0.508762012 0 0 0 0.1 dme-miR-184-3p 8mer-A1 TCCGTCCA 3L 8407329 8407336 - 3L_8407329_8407336_- 0.631136361 0.631136366 0.631136364 0 Oseg1 FBtr0345038|FBtr0076663 8407266|8407266 8407370|8407370 3L - 8407307 8407360 3'utr Oseg1 FlyBase G35375.1 AGAAGTGTGTGCAAATATATAATTTCCGTCCAAAACTGTACAAATAGGAACTAT 123 8407337 0.721228656 3 123 872 1 2.167317335 0.040816327 0.146341463 0.285714286 123 0 0 147 3L:8407307-8407360 8 Oseg1 FBtr0076663|FBtr0345038 8407266|8407266 8407370|8407370 TCCGTCCA 8mer-A1 dme-miR-184-3p 3L - 8407305 8407358 3'utr Oseg1 FlyBase G26767.1 AAGTGTGTGCAAATATATAATTTCCGTCCAAAACTGTACAAATAGGAACTATAC 99 8407337 0.701736893 5 96 665 0.964788732 2.136720567 0.070422535 0.333333333 0.535211268 99 5 0 137 3L:8407305-8407358 8 111 2799 FBgn0265102 118.8066667 3.826666667 5.82 0.934291005 29.00696864 19.07216495 1 1 1 0.1 dme-miR-970-3p 8mer-A1 TCTTATGA 3L 8427483 8427490 + 3L_8427483_8427490_+ 0.630263597 0.630548086 0.630405841 0.000201172 Cbl FBtr0076614 8427408 8428655 3L + 8427401 8427581 lincRNA_exon-lincRNA_intron Cbl FlyBase G28745.1 GAGGTATAGTTTTGTTCACAGCCTGATCAGCCTGATCCGCCTGCTCCGCTGCCGCCTGTGCTGCTATTTATATACATATTACTCTTATGATTACCTTTGGTTCGTTTATACAGTTATATATGCCTATATATACATTATATATTTTAGATTTTACAACTGCTATTGTTTATATAAGTTTAAT 61 8427491 0.987756108 26 59 536 0.971014493 1.348953548 0.15942029 0.098360656 0.202898551 61 0 2 67 3L:8427401-8427581 8 Cbl FBtr0076614 8427408 8428655 TCTTATGA 8mer-A1 dme-miR-970-3p 3L + 8427406 8427504 stop_codon Cbl FlyBase G21771.1 ATAGTTTTGTTCACAGCCTGATCAGCCTGATCCGCCTGCTCCGCTGCCGCCTGTGCTGCTATTTATATACATATTACTCTTATGATTACCTTTGGTTCG 35 8427497 0.989904453 16 31 305 0.884615385 1.185636577 0.096153846 0.342857143 0.557692308 35 4 2 46 3L:8427406-8427504 8 21.5 2800 FBgn0020224 1487.473333 60.45 92.97666667 0.014454041 0.35566584 0.231240813 -8 -14 -11 0.1 dme-miR-1006-3p 7mer-A1 GAATTTA 3L 8427989 8427995 + 3L_8427989_8427995_+ 0.699848645 0.699846682 0.699847663 1.34E-06 Cbl FBtr0076614 8427408 8428655 3L + 8427971 8428044 3'utr Cbl FlyBase G28747.1 TTGTACATAGGCACTATGGAATTTATAATTGTAACCTGTTCTGTATTATTCGTTGAATTTTCTCTTTCACATCC 9 8427987 0.984746636 5 7 76 0.888888889 0.903089987 0.222222222 0 0 9 1 0 8 3L:8427971-8428044 7 Cbl FBtr0076614 8427408 8428655 GAATTTA 7mer-A1 dme-miR-1006-3p 3L + 8427976 8428023 3'utr Cbl FlyBase G21772.1 CATAGGCACTATGGAATTTATAATTGTAACCTGTTCTGTATTATTCGT 7 8427987 0.87987295 4 7 67 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 3L:8427976-8428023 7 4 2801 FBgn0020224 1487.473333 60.45 92.97666667 0.002689124 0.066170389 0.043021547 2 2 2 0.1 dme-miR-190-5p 7mer-A1 CATATCA 3L 8428214 8428220 + 3L_8428214_8428220_+ 0.732665717 0.723879051 0.728272384 0.006213064 Cbl FBtr0076614 8427408 8428655 3L + 8428149 8428221 3'utr Cbl FlyBase G28748.1 TTAGTTTATTGTTTAATACTTCCAAAGATACATTTAGTTTGTAGTAGCGTGCGTTTACTTCCCCCCATATCAA 126 8428207 0.824637416 11 123 1014 0.97810219 2.127104798 0.051094891 0.087301587 0.160583942 126 3 0 134 3L:8428149-8428221 7 Cbl FBtr0076614 8427408 8428655 CATATCA 7mer-A1 dme-miR-190-5p 3L + 8428147 8428220 3'utr Cbl FlyBase G21773.1 TTTTAGTTTATTGTTTAATACTTCCAAAGATACATTTAGTTTGTAGTAGCGTGCGTTTACTTCCCCCCATATCA 130 8428207 0.816479966 12 123 1042 0.943877551 2.267171728 0.06122449 0.361538462 0.576530612 130 11 0 185 3L:8428147-8428220 7 95.5 2802 FBgn0020224 1487.473333 60.45 92.97666667 0.064202832 1.579818031 1.027139426 7 7 7 0.1 dme-miR-14-3p 7mer-m8 AAGACTG 3L 8428258 8428264 + 3L_8428258_8428264_+ 0.671795832 0.671795832 0.671795832 0 Cbl FBtr0076614 8427408 8428655 3L + 8428231 8428285 3'utr Cbl FlyBase G28749.1 ATTTGTAAGCAGCCAACGCGCTGCCCTAAGACTGTAATTTATTATTAACAAAAAA 68 8428257 0.800300049 9 55 480 0.805194805 0.83814918 0 0.132352941 0.233766234 68 7 8 62 3L:8428231-8428285 7 Cbl FBtr0076614 8427408 8428655 AAGACTG 7mer-m8 dme-miR-14-3p 3L + 8428234 8428287 3'utr Cbl FlyBase G21774.1 TGTAAGCAGCCAACGCGCTGCCCTAAGACTGTAATTTATTATTAACAAAAAAAA 48 8428257 0.76662485 10 40 309 0.824324324 1.183269844 0 0.333333333 0.567567568 48 10 3 61 3L:8428234-8428287 7 56 2803 FBgn0020224 1487.473333 60.45 92.97666667 0.037647734 0.926385443 0.602301653 1 1 1 0.1 dme-miR-184-5p 6mer3-8 TGATAA 3L 8432784 8432789 - 3L_8432784_8432789_- 0.99999922 0.999998062 0.999998641 7.78E-07 Unr FBtr0345595|FBtr0308954 8432320|8432320 8434468|8434468 3L - 8432748 8432803 3'utr Unr FlyBase G35382.1 CGAGGTTGATGGAATGATAATGGGATAATCGACAGACATGCCAAACGCCATCGCCT 7 8432797 0.959774829 5 7 32 1 1 0.2 0.285714286 0.5 7 0 0 10 3L:8432748-8432803 6 Unr FBtr0308954|FBtr0345595 8432320|8432320 8434468|8434468 TGATAA 6mer3-8 dme-miR-184-5p 3L - 8432778 8432811 3'utr Unr FlyBase G26772.1 GGGCAAATCGAGGTTGATGGAATGATAATGGGAT 11 8432797 0.634387209 5 9 56 0.928571429 1.113943352 0.214285714 0.272727273 0.428571429 11 1 0 13 3L:8432778-8432811 6 8 2804 FBgn0263352 12905.48667 184.7766667 285.27 0.000619891 0.04329551 0.028043608 8 8 8 0.1 dme-bantam-3p 6mer3-8 TGATCT 3L 8433535 8433540 - 3L_8433535_8433540_- 0.999999997 0.999999995 0.999999996 0 Unr FBtr0345595|FBtr0308954|FBtr0332984|FBtr0114592 8432320|8432320|8433230|8433230 8434468|8434468|8434468|8434468 3L - 8433517 8433554 3'utr Unr FlyBase G35387.1 TATTTCCCATGATTTGATCTTCGCTTGTATAAACACGT 30 8433540 0.688667363 6 26 290 0.897435897 1.243038049 0.128205128 0.2 0.384615385 30 3 1 35 3L:8433517-8433554 6 Unr FBtr0114592|FBtr0308954|FBtr0332984|FBtr0345595 8433230|8432320|8433230|8432320 8434468|8434468|8434468|8434468 TGATCT 6mer3-8 dme-bantam-3p 3L - 8433505 8433556 3'utr Unr FlyBase G26776.1 ATTATTTCCCATGATTTGATCTTCGCTTGTATAAACACGTCAAGTGGTTTTG 20 8433541 0.783196371 11 20 206 1 1.491361694 0.096774194 0.4 0.612903226 20 0 0 31 3L:8433505-8433556 6 23 2805 FBgn0263352 12905.48667 184.7766667 285.27 0.001782188 0.124474591 0.080625372 0 1 0.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 3L 8433800 8433805 - 3L_8433800_8433805_- 0.884145205 0.999999996 0.942072601 0.081921715 Unr FBtr0345595|FBtr0308954|FBtr0332984|FBtr0114592 8432320|8432320|8433230|8433230 8434468|8434468|8434468|8434468 3L - 8433791 8433846 3'utr Unr FlyBase G35389.1 ATTTATCTATGGCTGGCATAGTTCCTGCTTCTATTGTATCTTGATCTACTCGTATT 8 8433827 0.74579482 7 7 91 0.9 0.653212514 0.3 0.25 0.4 8 0 1 9 3L:8433791-8433846 6 Unr FBtr0114592|FBtr0308954|FBtr0332984|FBtr0345595 8433230|8432320|8433230|8432320 8434468|8434468|8434468|8434468 TGATCT 6mer3-8 dme-bantam-3p 3L - 8433791 8433834 3'utr Unr FlyBase G26779.1 CTGGCATAGTTCCTGCTTCTATTGTATCTTGATCTACTCGTATT 7 8433806 0.913247696 3 4 70 0.75 0.77815125 0.25 0.142857143 0.25 7 2 0 6 3L:8433791-8433834 6 5 2806 FBgn0263352 12905.48667 184.7766667 285.27 0.000387432 0.027059694 0.017527255 22 1 11.5 0.1 dme-miR-184-5p 6mer2-7 GATAAG 3L 8433968 8433973 - 3L_8433968_8433973_- 0.999570839 0.999960411 0.999765625 0.000275489 Unr FBtr0345595|FBtr0308954|FBtr0332984|FBtr0114592 8432320|8432320|8433230|8433230 8434468|8434468|8434468|8434468 3L - 8433956 8433985 3'utr Unr FlyBase G35391.1 AAAACCGATTGGGATAAGTGATGAGAGCAA 8 8433977 0.851583007 2 4 29 0.666666667 0.77815125 0.111111111 0.125 0.222222222 8 3 0 6 3L:8433956-8433985 6 Unr FBtr0114592|FBtr0308954|FBtr0332984|FBtr0345595 8433230|8432320|8433230|8432320 8434468|8434468|8434468|8434468 GATAAG 6mer2-7 dme-miR-184-5p 3L - 8433944 8433990 3'utr Unr FlyBase G26781.1 AATTAAAAACCGATTGGGATAAGTGATGAGAGCAAGGAAACGAGCAA 12 8433977 0.95559408 3 10 42 0.833333333 0.875061263 0 0.5 0.666666667 12 2 1 15 3L:8433944-8433990 6 9.5 2807 FBgn0263352 12905.48667 184.7766667 285.27 0.000736121 0.051413418 0.033301784 4 4 4 0.1 dme-miR-317-3p 8mer-A1 TGTGTTCA 3L 8470858 8470865 + 3L_8470858_8470865_+ 0.622670379 0.630684862 0.626677621 0.005667107 Gug FBtr0305699|FBtr0076618|FBtr0305696|FBtr0305697|FBtr0305698|FBtr0076616|FBtr0333048|FBtr0076619 8470769|8470769|8470769|8470769|8470769|8470769|8470769|8470769 8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669 3L + 8470756 8470887 stop_codon Gug FlyBase G28769.1 CAACGGCCCAGATAAGTGGACAGACAGCAATTGTAGAGAGCAAGCAACTGAACAAAGACAATACTCGGGCCGCGGCCGTGAGGAACTGCTTTGTGTGATTTTTGTGTTCAAGCGTTTACATTTTGTTTTCCA 92 8470857 0.974565337 18 86 533 0.930434783 2.029383778 0.32173913 0.195652174 0.356521739 92 8 0 107 3L:8470756-8470887 8 Gug FBtr0076619|FBtr0076616|FBtr0333048|FBtr0305697|FBtr0305698|FBtr0305699|FBtr0076618|FBtr0305696 8470769|8470769|8470769|8470769|8470769|8470769|8470769|8470769 8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669 TGTGTTCA 8mer-A1 dme-miR-317-3p 3L + 8470784 8470875 3'utr Gug FlyBase G21793.1 AATTGTAGAGAGCAAGCAACTGAACAAAGACAATACTCGGGCCGCGGCCGTGAGGAACTGCTTTGTGTGATTTTTGTGTTCAAGCGTTTACA 45 8470857 0.962856331 9 40 254 0.873239437 1.792391689 0.169014085 0.444444444 0.647887324 45 9 0 62 3L:8470784-8470875 8 28 2808 FBgn0010825 1916.706667 26.53 40.64 0.014608391 1.055408971 0.688976378 1 1 1 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 3L 8471665 8471671 + 3L_8471665_8471671_+ 0.779747373 0.782004853 0.780876113 0.001596294 Gug FBtr0305699|FBtr0076618|FBtr0305696|FBtr0305697|FBtr0305698|FBtr0076616|FBtr0333048|FBtr0333049|FBtr0076619 8470769|8470769|8470769|8470769|8470769|8470769|8470769|8471166|8470769 8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669 3L + 8471642 8471690 3'utr Gug FlyBase G28772.1 TCATATATATATTCGAGAGTATTGTACAAATGGATTCGGAGATAGTTTT 48 8471663 0.720444816 8 45 337 0.943396226 1.698970004 0.301886792 0.083333333 0.169811321 48 3 0 50 3L:8471642-8471690 7 Gug FBtr0333049|FBtr0076619|FBtr0076616|FBtr0333048|FBtr0305697|FBtr0305698|FBtr0305699|FBtr0076618|FBtr0305696 8471166|8470769|8470769|8470769|8470769|8470769|8470769|8470769|8470769 8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669 GTACAAA 7mer-A1 dme-miR-305-5p 3L + 8471644 8471691 3'utr Gug FlyBase G21796.1 ATATATATATTCGAGAGTATTGTACAAATGGATTCGGAGATAGTTTTC 31 8471663 0.693939081 6 30 191 0.97826087 1.653212514 0.239130435 0.387096774 0.586956522 31 1 0 45 3L:8471644-8471691 7 38.5 2809 FBgn0010825 1916.706667 26.53 40.64 0.020086537 1.451187335 0.94734252 2 2 2 0.1 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 8472551 8472557 + 3L_8472551_8472557_+ 0.527921893 0.591822909 0.559872401 0.04518483 Gug FBtr0305699|FBtr0076618|FBtr0305696|FBtr0305697|FBtr0305698|FBtr0076616|FBtr0333048|FBtr0333049|FBtr0076619 8470769|8470769|8470769|8470769|8470769|8470769|8470769|8471166|8470769 8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669 3L + 8472514 8472603 3'utr Gug FlyBase G28780.1 ATACAAAAAAAAACAAAACAAATGCAGCTATATTATTGCAGCTATATTACTAAATAAATTATAAAACAAAAAGATCATACTGAAAAGATA 154 8472549 0.983698849 13 143 1111 0.935483871 2.240549248 0.02688172 0.142857143 0.290322581 154 12 0 174 3L:8472514-8472603 7 Gug FBtr0333049|FBtr0076619|FBtr0076616|FBtr0333048|FBtr0305697|FBtr0305698|FBtr0305699|FBtr0076618|FBtr0305696 8471166|8470769|8470769|8470769|8470769|8470769|8470769|8470769|8470769 8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669 GCAGCTA 7mer-A1 dme-miR-980-3p 3L + 8472502 8472606 3'utr Gug FlyBase G21800.1 ATTTATATATATATACAAAAAAAAACAAAACAAATGCAGCTATATTATTGCAGCTATATTACTAAATAAATTATAAAACAAAAAGATCATACTGAAAAGATAAAT 98 8472549 0.981530708 10 93 680 0.960264901 1.860338007 0.046357616 0.387755102 0.602649007 98 5 1 145 3L:8472502-8472606 7 76 2810 FBgn0010825 1916.706667 26.53 40.64 0.039651346 2.864681493 1.87007874 2 2 2 0.1 dme-bantam-3p 6mer3-8 TGATCT 3L 8533492 8533497 + 3L_8533492_8533497_+ 0.636202145 0.850975154 0.74358865 0.151867515 foi FBtr0331417|FBtr0345601|FBtr0331418|FBtr0076624 8533104|8533104|8533104|8533104 8533984|8534503|8533984|8533984 3L + 8533470 8533636 3'utr foi FlyBase G28803.1 TGAAATTGGCTAGGTTATAAAGTGATCTTGAATTTAGATGAAAACATTTGAAAAGCATGCCGTGATGCTGTCAAATGAGAAAAGGAAGTAACAAAAAATGGATTGGATCTGGATCCCACAATCCTCTAATTACTGATCTTATACACGAAAGAGAACCTAAAAATTAC 122 8533496 0.978077291 20 120 989 0.972222222 2.146128036 0.25 0.147540984 0.277777778 122 4 0 140 3L:8533470-8533636 6 foi FBtr0331418|FBtr0076624|FBtr0331417|FBtr0345601 8533104|8533104|8533104|8533104 8533984|8533984|8533984|8534503 TGATCT 6mer3-8 dme-bantam-3p 3L + 8533422 8533545 3'utr foi FlyBase G21817.1 TGAACTGCGTTCGAATCCATTTCACACCCAATTTAATGTAAGATGTCTTGAAATTGGCTAGGTTATAAAGTGATCTTGAATTTAGATGAAAACATTTGAAAAGCATGCCGTGATGCTGTCAAAT 75 8533494 0.987547831 15 71 641 0.939655172 2.037426498 0.172413793 0.413333333 0.620689655 75 7 0 109 3L:8533422-8533545 6 74 2811 FBgn0024236 2703.683333 97.23 149.9066667 0.027370069 0.761081971 0.493640487 -4 -2 -3 0.1 dme-miR-190-5p 6mer3-8 ACATAT 3L 8533685 8533690 + 3L_8533685_8533690_+ 0.999868125 0.999999758 0.999933942 9.31E-05 foi FBtr0331417|FBtr0345601|FBtr0331418|FBtr0076624 8533104|8533104|8533104|8533104 8533984|8534503|8533984|8533984 3L + 8533649 8533722 3'utr foi FlyBase G28804.1 ATAAATATACATATATATTGTAGGATATGTATACATACATATACTTTTTGTATTTTGTAGTCTAGAGTGCGCAC 11 8533712 0.988486727 8 11 105 1 1.041392685 0.272727273 0 0 11 0 0 11 3L:8533649-8533722 6 foi FBtr0331418|FBtr0076624|FBtr0331417|FBtr0345601 8533104|8533104|8533104|8533104 8533984|8533984|8533984|8534503 ACATAT 6mer3-8 dme-miR-190-5p 3L + 8533683 8533739 3'utr foi FlyBase G21819.1 ATACATATACTTTTTGTATTTTGTAGTCTAGAGTGCGCACGTTTACTTTATGCGAGT 14 8533703 0.991923041 6 12 138 0.909090909 1.301029996 0.363636364 0.357142857 0.590909091 14 2 0 20 3L:8533683-8533739 6 2 2812 FBgn0024236 2703.683333 97.23 149.9066667 0.000739732 0.020569783 0.013341635 -27 -18 -22.5 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 8533795 8533802 + 3L_8533795_8533802_+ 0.500120318 0.500113012 0.500116665 5.16E-06 foi FBtr0331417|FBtr0345601|FBtr0331418|FBtr0076624 8533104|8533104|8533104|8533104 8533984|8534503|8533984|8533984 3L + 8533768 8533847 3'utr foi FlyBase G28805.1 TGTCCACCGCTGTTATGATTTTCTACAGTACTTAACGACTTGAACGCATATTTCCTCTTTCGGGAAATGTACACAAAACC 18 8533799 0.978441286 9 15 107 0.869565217 1.301029996 0.347826087 0.277777778 0.434782609 18 3 0 20 3L:8533768-8533847 8 foi FBtr0331418|FBtr0076624|FBtr0331417|FBtr0345601 8533104|8533104|8533104|8533104 8533984|8533984|8533984|8534503 GTACTTAA 8mer-A1 dme-miR-252-5p 3L + 8533772 8533836 3'utr foi FlyBase G21820.1 CACCGCTGTTATGATTTTCTACAGTACTTAACGACTTGAACGCATATTTCCTCTTTCGGGAAATG 15 8533799 0.975530423 6 15 96 1 1.342422681 0.272727273 0.333333333 0.545454545 15 0 0 22 3L:8533772-8533836 8 12.5 2813 FBgn0024236 2703.683333 97.23 149.9066667 0.004623323 0.128561144 0.083385217 -4 -4 -4 0.1 dme-miR-14-3p 6mer3-8 AAGACT 3L 8537247 8537252 + 3L_8537247_8537252_+ 0.999998769 0.99999544 0.999997104 2.40E-06 ergic53 FBtr0301629|FBtr0076626 8537117|8537117 8537581|8538013 3L + 8537194 8537274 3'utr ergic53 FlyBase G28812.1 AGATTCGCACACCTGACTAGGCAGCAACTAAATTTAGTTAAAATGAAAGATTTAAGACTTCAGCGTAGCATGCTCTACCAT 278 8537245 0.823812781 14 260 1773 0.938271605 2.181843588 0.330246914 0.143884892 0.265432099 278 19 1 304 3L:8537194-8537274 6 ergic53 FBtr0076626|FBtr0301629 8537117|8537117 8538013|8537581 AAGACT 6mer3-8 dme-miR-14-3p 3L + 8537184 8537275 3'utr ergic53 FlyBase G21826.1 ACGAGGAAACAGATTCGCACACCTGACTAGGCAGCAACTAAATTTAGTTAAAATGAAAGATTTAAGACTTCAGCGTAGCATGCTCTACCATT 131 8537245 0.980179067 12 118 829 0.900990099 1.481920138 0.262376238 0.381679389 0.599009901 131 15 5 182 3L:8537184-8537275 6 194 2814 FBgn0035909 3502.546667 181.83 278.43 0.05538827 1.06693065 0.696763998 2 2 2 0.1 dme-bantam-3p 7mer-m8 TGATCTC 3L 8564459 8564465 + 3L_8564459_8564465_+ 0.661615018 0.661615106 0.661615062 7.07E-08 rhea FBtr0333109 8564005 8574409 3L + 8564441 8564486 3'utr rhea FlyBase G28835.1 TTTGTGCAGTGCCTTCAGTGATCTCCTCAAGGCAGCCGAGCCAGAA 53 8564459 0.977387238 5 50 331 0.942028986 1.335792102 0.057971014 0.283018868 0.449275362 53 2 2 65 3L:8564441-8564486 7 rhea FBtr0333109 8564005 8574409 TGATCTC 7mer-m8 dme-bantam-3p 3L + 8564443 8564485 3'utr rhea FlyBase G21840.1 TGTGCAGTGCCTTCAGTGATCTCCTCAAGGCAGCCGAGCCAGA 30 8564459 0.973834817 5 30 184 1 1.643452676 0.022727273 0.266666667 0.5 30 0 0 44 3L:8564443-8564485 7 41.5 2815 FBgn0260442 4425.776667 56.13 85.46 0.009376885 0.739355069 0.485607302 0 0 0 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT 3L 8564909 8564915 + 3L_8564909_8564915_+ 0.658998751 0.658996982 0.658997867 1.27E-06 rhea FBtr0333109 8564005 8574409 3L + 8564882 8564936 3'utr rhea FlyBase G28837.1 TGATCCTAAGCTGAAGGCCGATCTCCTGGCAGCTGCTCGTGATGTGTCCAAGAGC 33 8564908 0.845735018 4 32 151 0.973684211 1.568201724 0.342105263 0.121212121 0.236842105 33 1 0 37 3L:8564882-8564936 7 rhea FBtr0333109 8564005 8574409 GGCAGCT 7mer-m8 dme-miR-980-3p 3L + 8564882 8564956 3'utr rhea FlyBase G21842.1 TGATCCTAAGCTGAAGGCCGATCTCCTGGCAGCTGCTCGTGATGTGTCCAAGAGCCTCACTGATATGTTGGAGCA 24 8564908 0.931830374 5 23 91 1 1.612783857 0.414634146 0.416666667 0.658536585 24 0 0 41 3L:8564882-8564956 7 27 2816 FBgn0260442 4425.776667 56.13 85.46 0.006100624 0.481026189 0.315937281 1 1 1 0.1 dme-miR-14-3p 6mer2-7 AGACTG 3L 8566049 8566054 + 3L_8566049_8566054_+ 0.999982366 0.999998267 0.999990317 1.12E-05 rhea FBtr0333109 8564005 8574409 3L + 8566034 8566061 3'utr rhea FlyBase G28846.1 GAATCCAGCTATCATAGACTGTGCTGAT 14 8566048 0.739556424 3 11 78 0.866666667 1.113943352 0.066666667 0.071428571 0.133333333 14 2 0 13 3L:8566034-8566061 6 rhea FBtr0333109 8564005 8574409 AGACTG 6mer2-7 dme-miR-14-3p 3L + 8566035 8566063 3'utr rhea FlyBase G21847.1 AATCCAGCTATCATAGACTGTGCTGATGA 7 8566048 0.703734284 4 7 39 1 0.954242509 0.222222222 0.142857143 0.333333333 7 0 0 9 3L:8566035-8566063 6 10.5 2817 FBgn0260442 4425.776667 56.13 85.46 0.002372465 0.18706574 0.122864498 1 1 1 0.1 dme-miR-184-3p 7mer-A1 CCGTCCA 3L 8566280 8566286 + 3L_8566280_8566286_+ 0.777308078 0.823307782 0.80030793 0.0325267 rhea FBtr0333109 8564005 8574409 3L + 8566256 8566300 3'utr rhea FlyBase G28847.1 AATGAGTGAATTCCCACCTTCAAGCCGTCCATATGCCACTCTGCA 36 8566287 0.710957753 6 35 215 0.975609756 1.602059991 0.195121951 0.111111111 0.219512195 36 1 0 40 3L:8566256-8566300 7 rhea FBtr0333109 8564005 8574409 CCGTCCA 7mer-A1 dme-miR-184-3p 3L + 8566259 8566303 3'utr rhea FlyBase G21848.1 GAGTGAATTCCCACCTTCAAGCCGTCCATATGCCACTCTGCAATC 8 8566287 0.951168645 2 7 38 1 1 0.6 0.25 0.4 8 0 0 10 3L:8566259-8566303 7 21 2818 FBgn0260442 4425.776667 56.13 85.46 0.00474493 0.37413148 0.245728996 -7 -7 -7 0.1 dme-miR-1007-3p 7mer-A1 GAGCTTA 3L 8567694 8567700 + 3L_8567694_8567700_+ 0.823349562 0.823349562 0.823349562 0 rhea FBtr0333109 8564005 8574409 3L + 8567667 8567706 3'utr rhea FlyBase G28853.1 AGTGGCCAGACGATGAACTCTGCTTCCGAGCTTATTGACA 6 8567701 0.815675635 5 5 43 0.833333333 0.698970004 0.166666667 0 0 6 1 0 5 3L:8567667-8567706 7 rhea FBtr0333109 8564005 8574409 GAGCTTA 7mer-A1 dme-miR-1007-3p 3L + 8567652 8567711 3'utr rhea FlyBase G21851.1 AACTTGCATGGATTCAGTGGCCAGACGATGAACTCTGCTTCCGAGCTTATTGACAAACTG 5 8567690 0.972506348 4 5 31 1 0.84509804 0.285714286 0.2 0.428571429 5 0 0 7 3L:8567652-8567711 7 4 2819 FBgn0260442 4425.776667 56.13 85.46 0.000903796 0.071263139 0.046805523 -7 4 -1.5 0.1 dme-miR-14-3p 7mer-m8 AAGACTG 3L 8570998 8571004 + 3L_8570998_8571004_+ 0.668263968 0.63313688 0.650700424 0.024838611 rhea FBtr0333109 8564005 8574409 3L + 8570981 8571069 3'utr rhea FlyBase G28858.1 ATGTGTCCTCACTACTAAAGACTGTGAAGGCTGTCGAGGATGAGCACACTCGCGGAACTCGTGCAATGGAGGCCACCGTAGAAGCCATC 31 8571005 0.988873903 4 29 166 0.944444444 1.230448921 0.472222222 0.161290323 0.277777778 31 1 1 34 3L:8570981-8571069 7 rhea FBtr0333109 8564005 8574409 AAGACTG 7mer-m8 dme-miR-14-3p 3L + 8570983 8571046 3'utr rhea FlyBase G21854.1 GTGTCCTCACTACTAAAGACTGTGAAGGCTGTCGAGGATGAGCACACTCGCGGAACTCGTGCAA 11 8571005 0.971328084 5 9 55 0.952380952 1.301029996 0.476190476 0.636363636 0.80952381 11 1 0 20 3L:8570983-8571046 7 17.5 2820 FBgn0260442 4425.776667 56.13 85.46 0.003954108 0.311776234 0.204774163 -7 -7 -7 0.1 dme-bantam-3p 6mer3-8 TGATCT 3L 8572052 8572057 + 3L_8572052_8572057_+ 0.990264495 0.983078417 0.986671456 0.00508134 rhea FBtr0333109 8564005 8574409 3L + 8572037 8572076 3'utr rhea FlyBase G28863.1 TGAAGTTTGACGAAATGATCTTGGAGGCTGCCAAGGGCAT 27 8572052 0.863490363 3 24 131 0.866666667 1.113943352 0.366666667 0.111111111 0.2 27 3 1 26 3L:8572037-8572076 6 rhea FBtr0333109 8564005 8574409 TGATCT 6mer3-8 dme-bantam-3p 3L + 8572036 8572077 3'utr rhea FlyBase G21858.1 ATGAAGTTTGACGAAATGATCTTGGAGGCTGCCAAGGGCATA 12 8572052 0.91152815 2 12 62 1 1.301029996 0.3 0.5 0.7 12 0 0 20 3L:8572036-8572077 6 18 2821 FBgn0260442 4425.776667 56.13 85.46 0.004067083 0.320684126 0.210624854 0 0 0 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 8574024 8574030 + 3L_8574024_8574030_+ 0.661615645 0.661615598 0.661615622 0 rhea FBtr0333109|FBtr0333108|FBtr0333106|FBtr0333107|FBtr0333105|FBtr0305210 8564005|8573788|8573788|8573788|8573788|8573788 8574409|8574409|8574409|8574409|8574409|8574409 3L + 8573997 8574046 3'utr rhea FlyBase G28873.1 AATCAAGTTTCAATGTTTTCGTATATCTGTGTTCTACGTGTTTATTTGCC 11 8574022 0.992622032 5 9 121 0.916666667 1.041392685 0.083333333 0.090909091 0.166666667 11 1 0 11 3L:8573997-8574046 7 rhea FBtr0333105|FBtr0305210|FBtr0333109|FBtr0333108|FBtr0333106|FBtr0333107 8573788|8573788|8564005|8573788|8573788|8573788 8574409|8574409|8574409|8574409|8574409|8574409 TGTGTTC 7mer-m8 dme-miR-317-3p 3L + 8574008 8574070 3'utr rhea FlyBase G21864.1 AATGTTTTCGTATATCTGTGTTCTACGTGTTTATTTGCCATTAAATTGCCCATATATATTTAT 13 8574022 0.991195885 7 13 138 1 1.322219295 0.19047619 0.384615385 0.619047619 13 0 0 21 3L:8574008-8574070 7 8.5 2822 FBgn0260442 4425.776667 56.13 85.46 0.001920567 0.151434171 0.099461736 2 2 2 0.1 dme-miR-305-3p 7mer-m8 ATGTGCC 3L 8574434 8574440 - 3L_8574434_8574440_- 0.674515654 0.674515579 0.674515616 7.07E-08 CG6638 FBtr0076651 8574405 8574574 3L - 8574419 8574451 3'utr CG6638 FlyBase G35451.1 TATGTATATGTATGTGCCTTAATAAAAGAAGTA 8 8574438 0.880945592 5 8 67 1 1 0.1 0.25 0.4 8 0 0 10 3L:8574419-8574451 7 CG6638 FBtr0076651 8574405 8574574 ATGTGCC 7mer-m8 dme-miR-305-3p 3L - 8574417 8574446 3'utr CG6638 FlyBase G26825.1 ATATGTATGTGCCTTAATAAAAGAAGTAAA 6 8574438 0.698774397 3 6 39 1 0.954242509 0 0.5 0.666666667 6 0 0 9 3L:8574417-8574446 7 7 2823 FBgn0035911 221 17.94666667 27.59333333 0.031674208 0.390044577 0.253684465 -2 -2 -2 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA 3L 8574495 8574502 - 3L_8574495_8574502_- 0.625336692 0.625363704 0.625350198 1.91E-05 CG6638 FBtr0076651 8574405 8574574 3L - 8574483 8574563 3'utr CG6638 FlyBase G35452.1 CATCTCTTTTTCCAATGTGGCAATAACGTGGACCAACTCTACTACCTGACAGACTAAATGTTGCATTTATTTTTTGAAGAT 41 8574504 0.885115464 12 37 318 0.916666667 1.643452676 0.125 0.170731707 0.291666667 41 4 0 44 3L:8574483-8574563 8 CG6638 FBtr0076651 8574405 8574574 TGCATTTA 8mer-A1 dme-miR-277-3p 3L - 8574485 8574536 3'utr CG6638 FlyBase G26826.1 GTGGACCAACTCTACTACCTGACAGACTAAATGTTGCATTTATTTTTTGAAG 14 8574503 0.849276496 5 13 125 0.909090909 1.301029996 0.318181818 0.5 0.681818182 14 2 0 20 3L:8574485-8574536 8 17 2824 FBgn0035911 221 17.94666667 27.59333333 0.076923077 0.947251114 0.616090843 2 1 1.5 0.1 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 8678483 8678490 + 3L_8678483_8678490_+ 0.643565458 0.643565458 0.643565458 0 h FBtr0100153|FBtr0076569 8678422|8678422 8679253|8679253 3L + 8678265 8678585 stop_codon h FlyBase G28893.1 AGCTGTAGCTACGCCCCGCCCAGTCCGGCCAACTCTAGCTACGAGCCCATGGACATCAAGCCATCGGTCATCCAGCGCGTGCCAATGGAGCAGCAGCCCCTGTCGCTGGTGATCAAGAAGCAGATCAAGGAGGAGGAGCAGCCCTGGCGGCCCTGGTAGAGGGTGTCTGCATATGCATATCATATAGCATAGCCACCCCTATCGAATCTCCCGCTTTTAAGACTGACCCCCCACAACTCATCCAACTCGCACACATGCGCAGGCGTTGTGCGCATGCGCGTAGACATTTCACATCATTCGCCGGGATTGCGCAAATGTTGC 1311 8678481 0.94834906 48 1139 6193 0.867421719 1.596097044 0.113257828 0.118230359 0.229846769 1311 167 32 1302 3L:8678265-8678585 8 h FBtr0076569|FBtr0100153 8678422|8678422 8679253|8679253 AAGACTGA 8mer-A1 dme-miR-14-3p 3L + 8678259 8678596 stop_codon h FlyBase G21885.1 AGCAGCAGCTGTAGCTACGCCCCGCCCAGTCCGGCCAACTCTAGCTACGAGCCCATGGACATCAAGCCATCGGTCATCCAGCGCGTGCCAATGGAGCAGCAGCCCCTGTCGCTGGTGATCAAGAAGCAGATCAAGGAGGAGGAGCAGCCCTGGCGGCCCTGGTAGAGGGTGTCTGCATATGCATATCATATAGCATAGCCACCCCTATCGAATCTCCCGCTTTTAAGACTGACCCCCCACAACTCATCCAACTCGCACACATGCGCAGGCGTTGTGCGCATGCGCGTAGACATTTCACATCATTCGCCGGGATTGCGCAAATGTTGCTTTGAAGTGTT 885 8678481 0.928873114 47 731 4117 0.827932099 1.729569726 0.143518519 0.340112994 0.549382716 885 204 19 1073 3L:8678259-8678596 8 715 2825 FBgn0001168 3068.926667 171.7433333 259.7866667 0.232980477 4.163189255 2.752258263 2 2 2 0.1 dme-miR-283-5p 6mer3-8 TGATAT 3L 8679113 8679118 + 3L_8679113_8679118_+ 0.987769348 0.984767289 0.986268319 0.002122735 h FBtr0100153|FBtr0076569 8678422|8678422 8679253|8679253 3L + 8679084 8679186 3'utr h FlyBase G28896.4 AAACACACAAATCTATTCGTAAGGCCACGTGATATAGTGAACATAATGAGCTTCTAAGAAAACAAAACAAGAATTTGATGCAAGCAAAAGCAAAAAAATCAAC 515 8679118 0.773103064 15 496 2298 0.966076696 2.03809005 0.148967552 0.248543689 0.42920354 515 18 5 655 3L:8679084-8679186 6 h FBtr0076569|FBtr0100153 8678422|8678422 8679253|8679253 TGATAT 6mer3-8 dme-miR-283-5p 3L + 8679085 8679173 3'utr h FlyBase G21886.2 AACACACAAATCTATTCGTAAGGCCACGTGATATAGTGAACATAATGAGCTTCTAAGAAAACAAAACAAGAATTTGATGCAAGCAAAAG 400 8679118 0.729972483 14 390 1809 0.98245614 2.187520721 0.132376396 0.4025 0.618819777 400 8 3 616 3L:8679085-8679173 6 388 2826 FBgn0001168 3068.926667 171.7433333 259.7866667 0.126428567 2.259185218 1.493533155 -5 -5 -5 0.1 dme-bantam-3p 6mer3-8 TGATCT 3L 8725790 8725795 + 3L_8725790_8725795_+ 0.999999249 0.998970042 0.999484646 0.000727754 CG6511 FBtr0333887|FBtr0076570 8725510|8725510 8726108|8726108 3L + 8725764 8725865 3'utr CG6511 FlyBase G28919.1 TTTGTAAGCGTTTGGAGACAGTTTTCTGATCTTGTCATCGGCAGCTCGGCTCTTATAAAGTCTGAGGGCCCTGGCCCAAACGTGTCGTTTATCTAGATTAGC 30 8725790 0.808227039 13 28 236 0.921052632 1.544068044 0.131578947 0.233333333 0.394736842 30 3 0 35 3L:8725764-8725865 6 CG6511 FBtr0333887|FBtr0076570 8725510|8725510 8726108|8726108 TGATCT 6mer3-8 dme-bantam-3p 3L + 8725770 8725841 3'utr CG6511 FlyBase G21903.1 AGCGTTTGGAGACAGTTTTCTGATCTTGTCATCGGCAGCTCGGCTCTTATAAAGTCTGAGGGCCCTGGCCCA 23 8725790 0.675211494 8 16 169 0.717948718 1.447158031 0.205128205 0.652173913 0.794871795 23 11 0 28 3L:8725770-8725841 6 15 2827 FBgn0035923 413.53 11.23333333 17.25666667 0.036273064 1.335311573 0.869229283 0 0 0 0.1 dme-miR-11-3p 7mer-m1 TGTGATG 3L 8725908 8725914 + 3L_8725908_8725914_+ 0.611930752 0.567288495 0.589609623 0.031566873 CG6511 FBtr0333887|FBtr0076570 8725510|8725510 8726108|8726108 3L + 8725887 8725981 3'utr CG6511 FlyBase G28920.1 ACAAGCTGGCTATATCGGACTTGTGATGGATGTTCAGATCCGTCAATCTTGGCTTGAGGTTTCAGCCGACTTACATTTGCATTGTATTGCGAATA 18 8725901 0.985383597 8 17 142 0.952380952 1.301029996 0.428571429 0.166666667 0.285714286 18 1 0 20 3L:8725887-8725981 7 CG6511 FBtr0333887|FBtr0076570 8725510|8725510 8726108|8726108 TGTGATG 7mer-m1 dme-miR-11-3p 3L + 8725889 8725930 3'utr CG6511 FlyBase G21904.1 AAGCTGGCTATATCGGACTTGTGATGGATGTTCAGATCCGTC 10 8725901 0.975011937 2 10 69 1 1.230448921 0.352941176 0.4 0.647058824 10 0 0 17 3L:8725889-8725930 7 10.5 2828 FBgn0035923 413.53 11.23333333 17.25666667 0.025391145 0.934718101 0.608460498 7 7 7 0.1 dme-miR-79-3p 7mer-m8 TAGCTTT 3L 878166 878172 - 3L_878166_878172_- 0.619664736 0.619591353 0.619628045 5.18E-05 CG13907 FBtr0072593|FBtr0345005 877289|877289 878452|878452 3L - 878051 878440 3'utr CG13907 FlyBase G33163.1 CGGTTGGAAAGGAGAGAGAAGTGAATTTACAGGGGGCAGTGCGGAGCTTAAGAGGATCCGGTGAGATATTTTTCTATTTACTTATACAGCAGAGGAGGAGGAGATCAGAGATCGAGCACACCTATATACAAAGTGGAGAAGACGGATGGATATATATATAGCCAGCCCCACACCATATATACATATATATATATATATACCTTTAAGCCTAGGCAACAGCGGAGGATGAAGTGCGGAAAATTCACTTTTCTACCAGGAGAACTCAGCTTAGCTTTCGATAAGATATAGAGAAACCTTCGGCTATATATAAAGTTATACTACGCTCATAAATTAACGATCGAAAACTGATACCGATCGCTGGTAGATTGCAACTGTTATACAGCAACCACA 246 878173 0.752724841 45 215 1070 0.884615385 1.289177169 0.22027972 0.142276423 0.262237762 246 21 12 253 3L:878051-878440 7 CG13907 FBtr0345005|FBtr0072593 877289|877289 878452|878452 TAGCTTT 7mer-m8 dme-miR-79-3p 3L - 878129 878187 3'utr CG13907 FlyBase G25093.1 CAGGAGAACTCAGCTTAGCTTTCGATAAGATATAGAGAAACCTTCGGCTATATATAAAG 24 878173 0.788760846 4 22 142 0.894736842 1.230448921 0.157894737 0.416666667 0.631578947 24 3 1 34 3L:878129-878187 7 33 2829 FBgn0035173 483.94 12.91333333 19.71333333 0.068190272 2.555498193 1.673993913 1 1 1 0.1 dme-bantam-3p 7mer-A1 GATCTCA 3L 8798299 8798305 + 3L_8798299_8798305_+ 0.816423459 0.823344346 0.819883903 0.004893745 Fhos FBtr0306631|FBtr0306630|FBtr0306632|FBtr0333888|FBtr0302584|FBtr0302085|FBtr0302583|FBtr0333889 8798193|8797744|8798193|8798193|8797744|8798193|8797647|8798193 8798719|8798719|8798719|8798719|8798719|8798719|8798719|8798719 3L + 8798257 8798312 3'utr Fhos FlyBase G28923.1 GACGTCACAAGTCGGGCACTACGCGCACAGACTGAAATTGGCGATCTCAGGCGAGC 10 8798294 0.852523294 3 10 34 1 1.146128036 0.285714286 0.4 0.571428571 10 0 0 14 3L:8798257-8798312 7 Fhos FBtr0302584|FBtr0302085|FBtr0302583|FBtr0333889|FBtr0306631|FBtr0306630|FBtr0306632|FBtr0333888 8797744|8798193|8797647|8798193|8798193|8797744|8798193|8798193 8798719|8798719|8798719|8798719|8798719|8798719|8798719|8798719 GATCTCA 7mer-A1 dme-bantam-3p 3L + 8798275 8798325 3'utr Fhos FlyBase G21908.1 CTACGCGCACAGACTGAAATTGGCGATCTCAGGCGAGCAAGCGAACCCAGA 14 8798295 0.944178409 3 12 50 0.909090909 1 0.318181818 0.428571429 0.636363636 14 1 1 20 3L:8798275-8798325 7 9 2830 FBgn0266084 182.0533333 3.39 5.253333333 0.049436063 2.654867257 1.71319797 5 4 4.5 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3L 8890906 8890912 + 3L_8890906_8890912_+ 0.443131015 0.443131002 0.443131008 0 dally FBtr0305901 8889317 8891192 3L + 8890877 8890932 3'utr dally FlyBase G28925.1 ATTTGTATCATTATTATTTAACTATTGCATGTGATTAATAATATTTAAGTTAAACG 47 8890902 0.785910368 5 43 526 0.921568627 1.371067862 0.058823529 0.042553191 0.117647059 47 3 1 47 3L:8890877-8890932 7 dally FBtr0305901 8889317 8891192 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 8890886 8890930 3'utr dally FlyBase G21910.1 ATTATTATTTAACTATTGCATGTGATTAATAATATTTAAGTTAAA 22 8890902 0.769376841 4 18 236 0.842105263 1.505149978 0 0.454545455 0.684210526 22 6 0 32 3L:8890886-8890930 7 33.5 2831 FBgn0263930 612.92 16.66666667 25.74 0.054656399 2.01 1.301476301 4 4 4 0.1 dme-miR-986-5p 7mer-m8 ATTCGAG 3L 892325 892331 + 3L_892325_892331_+ 0.670265376 0.661296297 0.665780837 0.006342111 CG32479 FBtr0333267|FBtr0333266|FBtr0072589 892174|892174|892174 895313|893520|893520 3L + 892275 892357 3'utr CG32479 FlyBase G26957.1 GCGAGTTTGGTTTTATATGCATATACATATACAAATTAACAATTAGATATATTCGAGCGGTATATAGTTAAGCCCAAAGTCCA 15 892323 0.72800944 11 13 104 0.894736842 0.929418926 0.105263158 0.133333333 0.315789474 15 1 1 17 3L:892275-892357 7 CG32479 FBtr0072589|FBtr0333266|FBtr0333267 892174|892174|892174 893520|893520|895313 ATTCGAG 7mer-m8 dme-miR-986-5p 3L + 892267 892343 3'utr CG32479 FlyBase G20405.1 GCGAGAATGCGAGTTTGGTTTTATATGCATATACATATACAAATTAACAATTAGATATATTCGAGCGGTATATAGTT 9 892310 0.987675896 6 7 73 0.857142857 1.079181246 0.142857143 0.333333333 0.571428571 9 2 0 12 3L:892267-892343 7 6 2832 FBgn0052479 4815.663333 78.18666667 119.8133333 0.001245934 0.076739427 0.050077899 2 15 8.5 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 3L 892480 892486 + 3L_892480_892486_+ 0.782910324 0.782910564 0.782910444 2.12E-07 CG32479 FBtr0333267|FBtr0333266|FBtr0072589 892174|892174|892174 895313|893520|893520 3L + 892425 892521 3'utr CG32479 FlyBase G26958.2 TTAAGGTTGAGTAGAAAAATAGGCAGCAAAAGAAACTCGTTGGAACGAAAACTTTGTACAAAGAGAAACGAAAGAACTCTGTAAACTAAACAGCGAG 313 892478 0.989908944 14 307 1020 0.98944591 1.971971276 0.319261214 0.166134185 0.311345646 313 1 3 375 3L:892425-892521 7 CG32479 FBtr0072589|FBtr0333266|FBtr0333267 892174|892174|892174 893520|893520|895313 GTACAAA 7mer-A1 dme-miR-305-5p 3L + 892416 892521 3'utr CG32479 FlyBase G20406.2 AGACTAGAATTAAGGTTGAGTAGAAAAATAGGCAGCAAAAGAAACTCGTTGGAACGAAAACTTTGTACAAAGAGAAACGAAAGAACTCTGTAAACTAAACAGCGAG 243 892478 0.940600746 14 238 821 0.983002833 2.06320822 0.348441926 0.33744856 0.543909348 243 4 2 347 3L:892416-892521 7 201.5 2833 FBgn0052479 4815.663333 78.18666667 119.8133333 0.041842626 2.577165757 1.681782773 2 2 2 0.1 dme-miR-1006-3p 6mer2-7 GAATTT 3L 8932547 8932552 - 3L_8932547_8932552_- 0.998873058 1 0.999436529 0.000796839 CG43783 FBtr0331518|FBtr0331519|FBtr0331516|FBtr0331517 8932233|8932233|8932233|8932233 8933062|8933062|8933062|8933062 3L - 8932538 8932578 3'utr CG43783 FlyBase G35492.1 AAGTAGATTAGTCCTAGAATGCGTGTGAATTTTAAATAAGA 18 8932559 0.873391453 3 17 152 0.956521739 1.342422681 0.086956522 0.277777778 0.434782609 18 1 0 22 3L:8932538-8932578 6 CG43783 FBtr0331517|FBtr0331516|FBtr0331519|FBtr0331518 8932233|8932233|8932233|8932233 8933062|8933062|8933062|8933062 GAATTT 6mer2-7 dme-miR-1006-3p 3L - 8932543 8932573 3'utr CG43783 FlyBase G26854.1 GATTAGTCCTAGAATGCGTGTGAATTTTAAA 7 8932548 0.713790937 3 7 57 1 1.079181246 0.416666667 0.428571429 0.666666667 7 0 0 12 3L:8932543-8932573 6 12 2834 FBgn0264305 845.6866667 21.05333333 32.24666667 0.014189653 0.569981001 0.372131486 7 -4 1.5 0.1 dme-miR-986-5p 7mer-m8 ATTCGAG 3L 893255 893261 + 3L_893255_893261_+ 0.661515682 0.528754497 0.595135089 0.093876345 CG32479 FBtr0333267|FBtr0333266|FBtr0072589 892174|892174|892174 895313|893520|893520 3L + 893214 893307 3'utr CG32479 FlyBase G26962.1 GATTGTCTCCCCGGCTTGGATGCGATGTTTGCCTTCATGATATTCGAGTCCTTAACTTTCTTTTCTCAGACCTAGAGCATTTAGTTTGTACATC 37 893256 0.989470011 10 36 349 0.955555556 1.633468456 0.044444444 0.162162162 0.311111111 37 2 0 43 3L:893214-893307 7 CG32479 FBtr0072589|FBtr0333266|FBtr0333267 892174|892174|892174 893520|893520|895313 ATTCGAG 7mer-m8 dme-miR-986-5p 3L + 893217 893276 3'utr CG32479 FlyBase G20411.1 TGTCTCCCCGGCTTGGATGCGATGTTTGCCTTCATGATATTCGAGTCCTTAACTTTCTTT 28 893255 0.759927122 7 26 255 0.961538462 1.397940009 0.038461538 0.5 0.730769231 28 1 1 50 3L:893217-893276 7 28 2835 FBgn0052479 4815.663333 78.18666667 119.8133333 0.00581436 0.358117326 0.233696862 -1 0 -0.5 0.1 dme-miR-965-3p 7mer-A1 ACGCTTA 3L 8932826 8932832 - 3L_8932826_8932832_- 0.819871522 0.822636774 0.821254148 0.001955362 CG43783 FBtr0331518|FBtr0331519|FBtr0331516|FBtr0331517 8932233|8932233|8932233|8932233 8933062|8933062|8933062|8933062 3L - 8932812 8932875 3'utr CG43783 FlyBase G35493.1 GATGAGTACAAGGGACGACCGATTCCGAATGACAAGTTACAAAACGCTTATTTTCATCACATTC 14 8932824 0.973028007 7 12 73 0.941176471 1.204119983 0.235294118 0.214285714 0.352941176 14 1 0 16 3L:8932812-8932875 7 CG43783 FBtr0331517|FBtr0331516|FBtr0331519|FBtr0331518 8932233|8932233|8932233|8932233 8933062|8933062|8933062|8933062 ACGCTTA 7mer-A1 dme-miR-965-3p 3L - 8932816 8932847 3'utr CG43783 FlyBase G26855.1 ATGACAAGTTACAAAACGCTTATTTTCATCAC 7 8932825 0.60037647 3 6 47 1 1 0.1 0.285714286 0.5 7 0 0 10 3L:8932816-8932847 7 7 2836 FBgn0264305 845.6866667 21.05333333 32.24666667 0.008277297 0.332488917 0.2170767 -8 -7 -7.5 0.1 dme-bantam-3p 6mer2-7 GATCTC 3L 8932914 8932919 - 3L_8932914_8932919_- 0.999999526 0.9999997 0.999999613 1.41E-07 CG43783 FBtr0331518|FBtr0331519|FBtr0331516|FBtr0331517 8932233|8932233|8932233|8932233 8933062|8933062|8933062|8933062 3L - 8932890 8932938 5'utr-coding CG43783 FlyBase G35494.1 AAGCTTAGATTAAATTTTCGATCTCCAGTTCCGGTTTCGAATACTTAAT 19 8932923 0.985993081 6 18 186 0.954545455 1.021189299 0.045454545 0.157894737 0.272727273 19 0 1 21 3L:8932890-8932938 6 CG43783 FBtr0331517|FBtr0331516|FBtr0331519|FBtr0331518 8932233|8932233|8932233|8932233 8933062|8933062|8933062|8933062 GATCTC 6mer2-7 dme-bantam-3p 3L - 8932897 8932937 5'utr-coding CG43783 FlyBase G26856.1 AGCTTAGATTAAATTTTCGATCTCCAGTTCCGGTTTCGAAT 14 8932923 0.686548543 5 11 136 0.8 1.204119983 0 0.357142857 0.55 14 4 0 16 3L:8932897-8932937 6 16 2837 FBgn0264305 845.6866667 21.05333333 32.24666667 0.018919537 0.759974668 0.496175315 4 4 4 0.1 dme-miR-999-3p 6mer3-8 AGTTAA 3L 893403 893408 + 3L_893403_893408_+ 0.999113185 0.999998134 0.999555659 0.000625719 CG32479 FBtr0333267|FBtr0333266|FBtr0072589 892174|892174|892174 895313|893520|893520 3L + 893337 893422 3'utr CG32479 FlyBase G26963.1 AAAAGATTTGAATGGGAATAATTATTAAATGTAATCGGGTACGAACTAAAGCTAATCAACCATACTAGTTAATAGATGTCTTACAA 24 893392 0.882833092 8 22 177 0.961538462 1.397940009 0.192307692 0.130434783 0.230769231 23 1 0 25 3L:893337-893422 6 CG32479 FBtr0072589|FBtr0333266|FBtr0333267 892174|892174|892174 893520|893520|895313 AGTTAA 6mer3-8 dme-miR-999-3p 3L + 893368 893448 3'utr CG32479 FlyBase G20412.1 TAATCGGGTACGAACTAAAGCTAATCAACCATACTAGTTAATAGATGTCTTACAAACGTATACACCCATATATATTTTCTT 13 893417 0.872728849 7 13 97 1 1.278753601 0 0.307692308 0.526315789 13 0 0 19 3L:893368-893448 6 10.5 2838 FBgn0052479 4815.663333 78.18666667 119.8133333 0.002180385 0.134293997 0.087636323 11 -14 -1.5 0.1 dme-miR-263a-5p 6mer3-8 GTGCCA 3L 893491 893496 + 3L_893491_893496_+ 1 1 1 0 CG32479 FBtr0333267|FBtr0333266|FBtr0072589 892174|892174|892174 895313|893520|893520 3L + 893469 893526 3'utr-intron CG32479 FlyBase G26964.1 ATATATATTATTTATAGATATCGTGCCAATGTTAAAACATCTAAAAATTTTCAAAAAA 12 893499 0.708699866 8 12 106 1 1.079181246 0.166666667 0 0 12 0 0 12 3L:893469-893526 6 CG32479 FBtr0072589|FBtr0333266|FBtr0333267 892174|892174|892174 893520|893520|895313 GTGCCA 6mer3-8 dme-miR-263a-5p 3L + 893473 893518 3'utr CG32479 FlyBase G20413.1 ATATTATTTATAGATATCGTGCCAATGTTAAAACATCTAAAAATTT 11 893492 0.771565008 4 10 87 0.9375 1.176091259 0 0.363636364 0.5625 11 1 0 15 3L:893473-893518 6 10.5 2839 FBgn0052479 4815.663333 78.18666667 119.8133333 0.002180385 0.134293997 0.087636323 -8 -1 -4.5 0.1 dme-miR-79-3p 7mer-A1 AGCTTTA 3L 8939394 8939400 - 3L_8939394_8939400_- 0.823349562 0.823349562 0.823349562 0 orb2 FBtr0331515|FBtr0331514 8937098|8939063 8942890|8942890 3L - 8939376 8939411 3'utr orb2 FlyBase G35506.1 GTCGGATTGACAGCTTTAGTTTTATAGAGAATCTTG 12 8939395 0.870360101 5 12 109 1 1.204119983 0.25 0.25 0.4375 12 0 0 16 3L:8939376-8939411 7 orb2 FBtr0331515|FBtr0331514 8937098|8939063 8942890|8942890 AGCTTTA 7mer-A1 dme-miR-79-3p 3L - 8939380 8939410 3'utr orb2 FlyBase G26863.1 TCGGATTGACAGCTTTAGTTTTATAGAGAAT 5 8939396 0.78121999 2 4 47 0.769230769 1 0.230769231 0.8 0.923076923 5 3 0 10 3L:8939380-8939410 7 8.5 2840 FBgn0264307 292.6133333 6.573333333 10.15 0.029048574 1.293103448 0.837438424 -5 -4 -4.5 0.1 dme-miR-190-5p 6mer3-8 ACATAT 3L 893984 893989 + 3L_893984_893989_+ 0.979994131 0.999999998 0.989997064 0.014146308 CG32479 FBtr0333267 892174 895313 3L + 893962 893999 3'utr CG32479 FlyBase G26966.1 TATATATATATTTTGATGTTATACATATATGAACTAAT 7 893978 0.770499134 3 4 69 0.636363636 0.84509804 0.363636364 0.571428571 0.727272727 7 4 0 7 3L:893962-893999 6 CG32479 FBtr0333267 892174 895313 ACATAT 6mer3-8 dme-miR-190-5p 3L + 893959 894019 3'utr CG32479 FlyBase G20415.1 ATATATATATATATTTTGATGTTATACATATATGAACTAATTTTAAGCGAAATTATAGGAT 7 893988 0.987964356 6 7 68 1 1.041392685 0.363636364 0.428571429 0.636363636 7 0 0 11 3L:893959-894019 6 5.5 2841 FBgn0052479 4815.663333 78.18666667 119.8133333 0.001142106 0.070344475 0.045904741 6 -4 1 0.1 dme-miR-317-3p 8mer-A1 TGTGTTCA 3L 8941267 8941274 - 3L_8941267_8941274_- 0.423609868 0.482311235 0.452960551 0.041508087 orb2 FBtr0331515|FBtr0331514 8937098|8939063 8942890|8942890 3L - 8941247 8941294 3'utr orb2 FlyBase G35508.1 AACAAAACAGTCAAATTGCTTGTGTTCAGTATTATGATTTATTTATGA 48 8941273 0.617789618 7 48 460 1 1.77815125 0.233333333 0.1875 0.35 48 0 0 60 3L:8941247-8941294 8 orb2 FBtr0331515|FBtr0331514 8937098|8939063 8942890|8942890 TGTGTTCA 8mer-A1 dme-miR-317-3p 3L - 8941249 8941290 3'utr orb2 FlyBase G26865.1 AAACAGTCAAATTGCTTGTGTTCAGTATTATGATTTATTTAT 40 8941274 0.659603857 5 38 390 0.962962963 1.716003344 0.203703704 0.275 0.462962963 40 2 0 52 3L:8941249-8941290 8 43.5 2842 FBgn0264307 292.6133333 6.573333333 10.15 0.148660348 6.617647059 4.285714286 -1 0 -0.5 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 3L 8941368 8941374 - 3L_8941368_8941374_- 0.620203176 0.619850586 0.620026881 0.000249326 orb2 FBtr0331515|FBtr0331513|FBtr0331514 8937098|8941311|8939063 8942890|8942890|8942890 3L - 8941350 8941402 3'utr orb2 FlyBase G35509.1 AACAACACATTTACACTGAAAGTCTGTTTGCATTTGTTGCCATTTGGCTTAAT 14 8941375 0.870932845 5 13 118 0.941176471 1.204119983 0.176470588 0.214285714 0.352941176 14 1 0 16 3L:8941350-8941402 7 orb2 FBtr0331515|FBtr0331513|FBtr0331514 8937098|8941311|8939063 8942890|8942890|8942890 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 8941350 8941402 3'utr orb2 FlyBase G26866.1 AACAACACATTTACACTGAAAGTCTGTTTGCATTTGTTGCCATTTGGCTTAAT 11 8941375 0.858351224 5 11 102 1 1.176091259 0.066666667 0.272727273 0.466666667 11 0 0 15 3L:8941350-8941402 7 9.5 2843 FBgn0264307 292.6133333 6.573333333 10.15 0.032466053 1.445233266 0.935960591 1 1 1 0.1 dme-miR-282-5p 7mer-A1 GAGGCTA 3L 8942186 8942192 - 3L_8942186_8942192_- 0.814981799 0.808200967 0.811591383 0.00479475 orb2 FBtr0331515|FBtr0331513|FBtr0331514 8937098|8941311|8939063 8942890|8942890|8942890 3L - 8942147 8942205 3'utr orb2 FlyBase G35513.1 TTGTATGCCAATCGAGGCTAGTCCTAAAATTATTAGTGAGCTGCTCACCCTCTCTCGAA 12 8942195 0.971319829 5 10 65 0.823529412 1.146128036 0.235294118 0.333333333 0.529411765 12 3 0 14 3L:8942147-8942205 7 orb2 FBtr0331515|FBtr0331513|FBtr0331514 8937098|8941311|8939063 8942890|8942890|8942890 GAGGCTA 7mer-A1 dme-miR-282-5p 3L - 8942133 8942208 3'utr orb2 FlyBase G26867.1 ATCTTGTATGCCAATCGAGGCTAGTCCTAAAATTATTAGTGAGCTGCTCACCCTCTCTCGAAAAGGCTTTTTGCTT 10 8942181 0.974224651 7 10 63 1 1.113943352 0.153846154 0.3 0.461538462 10 0 0 13 3L:8942133-8942208 7 8 2844 FBgn0264307 292.6133333 6.573333333 10.15 0.027339834 1.21703854 0.78817734 3 -11 -4 0.1 dme-miR-252-5p 6mer3-8 GTACTT 3L 8942359 8942364 - 3L_8942359_8942364_- 0.958827308 0.959813563 0.959320435 0.000697419 orb2 FBtr0331515|FBtr0331513|FBtr0331514|FBtr0331512 8937098|8941311|8939063|8942309 8942890|8942890|8942890|8942890 3L - 8942343 8942392 3'utr orb2 FlyBase G35515.1 TGCGTTCGATGCCTGCACAGTATTTTTTGTACTTTATATTTTTAGCAACA 24 8942368 0.989622435 8 20 181 0.935483871 1.462397998 0.258064516 0.208333333 0.387096774 24 2 0 29 3L:8942343-8942392 6 orb2 FBtr0331515|FBtr0331513|FBtr0331514|FBtr0331512 8937098|8941311|8939063|8942309 8942890|8942890|8942890|8942890 GTACTT 6mer3-8 dme-miR-252-5p 3L - 8942362 8942397 3'utr orb2 FlyBase G26869.1 GATTTTGCGTTCGATGCCTGCACAGTATTTTTTGTA 20 8942367 0.643246597 7 19 190 0.933333333 1.447158031 0.1 0.4 0.6 20 2 0 28 3L:8942362-8942397 2 14 2845 FBgn0264307 292.6133333 6.573333333 10.15 0.04784471 2.129817444 1.379310345 4 3 3.5 0.1 dme-miR-34-5p 6mer2-7 ACTGCC 3L 894597 894602 + 3L_894597_894602_+ 0.985205283 0.979145599 0.982175441 0.004284855 CG32479 FBtr0333267 892174 895313 3L + 894581 894628 3'utr CG32479 FlyBase G26970.1 TTTTTTGTAAGCTCCAACTGCCTGATGGTCTTGAAACGCACTGTTCTG 57 894605 0.776348137 5 54 352 0.973684211 1.568201724 0.328947368 0.263157895 0.447368421 57 1 1 74 3L:894581-894628 6 CG32479 FBtr0333267 892174 895313 ACTGCC 6mer2-7 dme-miR-34-5p 3L + 894584 894618 3'utr CG32479 FlyBase G20418.1 TTTGTAAGCTCCAACTGCCTGATGGTCTTGAAACG 45 894604 0.782563841 4 39 230 0.890625 1.45484486 0.390625 0.409090909 0.59375 44 6 1 57 3L:894584-894618 6 47.5 2846 FBgn0052479 4815.663333 78.18666667 119.8133333 0.009863646 0.607520464 0.396450033 -8 -7 -7.5 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG 3L 894753 894758 + 3L_894753_894758_+ 1 1 1 0 CG32479 FBtr0333267 892174 895313 3L + 894685 894776 3'utr CG32479 FlyBase G26971.1 TTGTAATACCCAAGTCACATTCTGTTGTCCCCGATTAATGTATGTTTTAGTTTTAAGTAGTTTCTAAGGCTGTGTAACTAACTAACATAAGT 49 894746 0.98993941 14 45 542 0.927272727 1.707570176 0.036363636 0.102040816 0.2 49 4 0 51 3L:894685-894776 6 CG32479 FBtr0333267 892174 895313 GCTGTG 6mer2-7 dme-miR-1008-3p 3L + 894689 894776 3'utr CG32479 FlyBase G20419.1 AATACCCAAGTCACATTCTGTTGTCCCCGATTAATGTATGTTTTAGTTTTAAGTAGTTTCTAAGGCTGTGTAACTAACTAACATAAGT 42 894747 0.993944659 14 35 451 0.852459016 1.414973348 0.081967213 0.357142857 0.557377049 42 8 1 52 3L:894689-894776 6 40.5 2847 FBgn0052479 4815.663333 78.18666667 119.8133333 0.008410056 0.517991132 0.338025818 7 6 6.5 0.1 dme-miR-14-3p 7mer-m8 AAGACTG 3L 8961313 8961319 - 3L_8961313_8961319_- 0.671665765 0.671535379 0.671600572 9.22E-05 CG5660 FBtr0346542|FBtr0076560 8961272|8961272 8961399|8961399 3L - 8961298 8961336 3'utr CG5660 FlyBase G35523.1 CTGTTTGTTTAGAATTAAAGACTGCAATATTTATTAAAT 14 8961322 0.755189438 5 14 114 1 1.176091259 0.133333333 0.071428571 0.133333333 14 0 0 15 3L:8961298-8961336 7 CG5660 FBtr0346542|FBtr0076560 8961272|8961272 8961399|8961399 AAGACTG 7mer-m8 dme-miR-14-3p 3L - 8961298 8961330 3'utr CG5660 FlyBase G26875.1 GTTTAGAATTAAAGACTGCAATATTTATTAAAT 8 8961322 0.73731544 5 8 54 1 1.041392685 0.272727273 0.375 0.545454545 8 0 0 11 3L:8961298-8961330 7 11 2848 FBgn0035942 106.3333333 4.03 6.186666667 0.103448276 2.729528536 1.778017241 3 3 3 0.1 dme-miR-8-3p 7mer-A1 AGTATTA 3L 8971682 8971688 + 3L_8971682_8971688_+ 0.823349148 0.823349562 0.823349355 3.54E-07 CG5026 FBtr0076516 8971179 8971752 3L + 8971584 8971694 3'utr CG5026 FlyBase G28965.1 TTTTATGGAATTTTTAGCGTATAAGTCTCCAAAATTACCTATTTATAGTACTTACTTGTGTCAGTTATTTAGTGGTCAACAAGCCACAGATCAAATTAAGTATTATAAACT 9 8971680 0.984019702 6 9 78 1 0.954242509 0 0 0 9 0 0 9 3L:8971584-8971694 7 CG5026 FBtr0076516 8971179 8971752 AGTATTA 7mer-A1 dme-miR-8-3p 3L + 8971661 8971697 3'utr CG5026 FlyBase G21935.1 AACAAGCCACAGATCAAATTAAGTATTATAAACTCAA 5 8971680 0.976598387 3 5 34 1 0.698970004 0 0 0 5 0 0 5 3L:8971661-8971697 7 4.5 2849 FBgn0035945 330 15.41 23.52 0.013636364 0.29201817 0.191326531 2 2 2 0.1 dme-miR-252-5p 6mer3-8 GTACTT 3L 8972165 8972170 - 3L_8972165_8972170_- 0.999999895 0.999998791 0.999999343 7.78E-07 pix FBtr0076557|FBtr0076558 8972054|8972054 8972332|8972332 3L - 8972145 8972256 3'utr pix FlyBase G35527.1 TTCTTTCGTTGAAGAACACATTTGCTTTCAAATTAATTTGTTATTGTTGTCGAGGATTGCGTACAATCGAAAATTGGGGATTAATTGTACTTGATTAAAGTGAGTTTTATAT 32 8972171 0.769394638 12 30 265 0.972222222 1.243038049 0.361111111 0.125 0.222222222 32 0 1 35 3L:8972145-8972256 6 pix FBtr0076557|FBtr0076558 8972054|8972054 8972332|8972332 GTACTT 6mer3-8 dme-miR-252-5p 3L - 8972143 8972196 3'utr pix FlyBase G26878.1 GTACAATCGAAAATTGGGGATTAATTGTACTTGATTAAAGTGAGTTTTATATAC 21 8972171 0.980609178 6 20 182 1 1.447158031 0.464285714 0.238095238 0.428571429 21 0 0 28 3L:8972143-8972196 6 21 2850 FBgn0086706 1403.55 77.59666667 118.19 0.01496206 0.270630182 0.177680007 1 1 1 0.1 dme-miR-190-5p 6mer3-8 ACATAT 3L 8991030 8991035 - 3L_8991030_8991035_- 0.999999163 1 0.999999582 5.66E-07 smg FBtr0076550|FBtr0076551|FBtr0076549|FBtr0290103|FBtr0290104 8990315|8990315|8990315|8990315|8990315 8991495|8991495|8991495|8992080|8991495 3L - 8991009 8991048 3'utr smg FlyBase G35549.1 GAGAATCGGAACCACATATTGTATTTTGCATATTTAAGCG 7 8991032 0.983461999 2 6 50 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 3L:8991009-8991048 6 smg FBtr0290104|FBtr0076549|FBtr0290103|FBtr0076550|FBtr0076551 8990315|8990315|8990315|8990315|8990315 8991495|8991495|8992080|8991495|8991495 ACATAT 6mer3-8 dme-miR-190-5p 3L - 8991004 8991054 3'utr smg FlyBase G26896.1 GTGTTTGAGAATCGGAACCACATATTGTATTTTGCATATTTAAGCGTAAGC 6 8991031 0.976975838 3 5 43 1 1.113943352 0.461538462 0.666666667 0.846153846 6 0 0 13 3L:8991004-8991054 6 5 2851 FBgn0016070 840.7666667 21.58333333 33.01666667 0.005946953 0.231660232 0.151438667 -3 -4 -3.5 0.1 dme-miR-190-5p 6mer3-8 ACATAT 3L 8991150 8991155 - 3L_8991150_8991155_- 0.922137635 0.868413427 0.895275531 0.037988746 smg FBtr0076550|FBtr0076551|FBtr0076549|FBtr0290103|FBtr0290104 8990315|8990315|8990315|8990315|8990315 8991495|8991495|8991495|8992080|8991495 3L - 8991122 8991162 3'utr smg FlyBase G35551.1 AAAAGGAACATATTTGCTGAACCGTAACTGCACCAGAGGAA 9 8991149 0.945812603 5 8 41 0.923076923 1.079181246 0.461538462 0.444444444 0.615384615 9 1 0 12 3L:8991122-8991162 6 smg FBtr0290104|FBtr0076549|FBtr0290103|FBtr0076550|FBtr0076551 8990315|8990315|8990315|8990315|8990315 8991495|8991495|8992080|8991495|8991495 ACATAT 6mer3-8 dme-miR-190-5p 3L - 8991127 8991161 3'utr smg FlyBase G26897.1 AAAGGAACATATTTGCTGAACCGTAACTGCACCAG 7 8991149 0.744677543 4 5 35 0.636363636 0.84509804 0.545454545 0.428571429 0.636363636 7 4 0 7 3L:8991127-8991161 6 6 2852 FBgn0016070 840.7666667 21.58333333 33.01666667 0.007136344 0.277992278 0.181726401 -6 -6 -6 0.1 dme-miR-932-5p 8mer-A1 GGAATTGA 3L 8991290 8991297 - 3L_8991290_8991297_- 0.469413086 0.6749828 0.572197943 0.145359729 smg FBtr0076550|FBtr0076551|FBtr0076549|FBtr0290103|FBtr0290104 8990315|8990315|8990315|8990315|8990315 8991495|8991495|8991495|8992080|8991495 3L - 8991255 8991320 3'utr smg FlyBase G35552.1 AAGGAAGAAAGCTGGATGGAGAGGGAATTGAAAAGTGAGAATTGAGAAACGAGAGCTGATAATTGT 18 8991293 0.867540953 7 16 63 0.909090909 1 0.045454545 0.166666667 0.318181818 18 1 1 20 3L:8991255-8991320 8 smg FBtr0290104|FBtr0076549|FBtr0290103|FBtr0076550|FBtr0076551 8990315|8990315|8990315|8990315|8990315 8991495|8991495|8992080|8991495|8991495 GGAATTGA 8mer-A1 dme-miR-932-5p 3L - 8991278 8991320 3'utr smg FlyBase G26899.1 AAGGAAGAAAGCTGGATGGAGAGGGAATTGAAAAGTGAGAATT 6 8991293 0.856498459 3 6 16 1 1.113943352 0 0.666666667 0.846153846 6 0 0 13 3L:8991278-8991320 8 10 2853 FBgn0016070 840.7666667 21.58333333 33.01666667 0.011893906 0.463320463 0.302877335 -4 -4 -4 0.1 dme-miR-14-3p 7mer-A1 AGACTGA 3L 8991353 8991359 - 3L_8991353_8991359_- 0.823176224 0.823005184 0.823090704 0.000120915 smg FBtr0076550|FBtr0076551|FBtr0076549|FBtr0290103|FBtr0290104 8990315|8990315|8990315|8990315|8990315 8991495|8991495|8991495|8992080|8991495 3L - 8991331 8991386 3'utr smg FlyBase G35553.1 TAAAATGAACTCTGCATCGTGACCATGAGACTGACTAAGATTACTTTTCGCAACTA 934 8991361 0.948247331 10 919 6276 0.98394712 2.540746464 0.271010387 0.124197002 0.227573182 934 15 2 1042 3L:8991331-8991386 7 smg FBtr0290104|FBtr0076549|FBtr0290103|FBtr0076550|FBtr0076551 8990315|8990315|8990315|8990315|8990315 8991495|8991495|8992080|8991495|8991495 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 8991332 8991384 3'utr smg FlyBase G26900.1 AAATGAACTCTGCATCGTGACCATGAGACTGACTAAGATTACTTTTCGCAACT 481 8991361 0.932388816 7 466 3020 0.973262032 2.862131379 0.279411765 0.376299376 0.598930481 481 20 0 728 3L:8991332-8991384 7 702.5 2854 FBgn0016070 840.7666667 21.58333333 33.01666667 0.835546921 32.54826255 21.27713276 2 2 2 0.1 dme-miR-1008-3p 8mer-A1 AGCTGTGA 3L 9002317 9002324 + 3L_9002317_9002324_+ 0.567425574 0.499489702 0.533457638 0.048037936 CG5087 FBtr0076520|FBtr0333908 9002128|9002128 9002566|9002566 3L + 9002293 9002344 3'utr CG5087 FlyBase G28992.1 ATTAAGAAGTAAACATAAACGTATAGCTGTGATAAAACTATAATAAACTAAC 156 9002316 0.768287288 6 145 932 0.932960894 1.921686475 0.005586592 0.128205128 0.240223464 156 11 1 167 3L:9002293-9002344 8 CG5087 FBtr0076520|FBtr0333908 9002128|9002128 9002566|9002566 AGCTGTGA 8mer-A1 dme-miR-1008-3p 3L + 9002296 9002342 3'utr CG5087 FlyBase G21949.1 AAGAAGTAAACATAAACGTATAGCTGTGATAAAACTATAATAAACTA 90 9002316 0.721167928 8 79 520 0.893129771 1.591064607 0.007633588 0.322222222 0.534351145 90 12 2 117 3L:9002296-9002342 8 123 2855 FBgn0035953 365.8866667 11.12666667 17.00666667 0.33616967 11.05452367 7.23245786 1 1 1 0.1 dme-miR-283-5p 7mer-m8 TGATATT 3L 9067509 9067515 - 3L_9067509_9067515_- 0.617811147 0.616015795 0.616913471 0.001269469 CG4911 FBtr0345351 9067193 9070515 3L - 9067445 9067519 3'utr CG4911 FlyBase G35570.1 AGATTGATATTCCAGTCAGGATGAAAAGTGAAGATGAGAATGATTCAAATGTTAAATTATATATCGATATGTAGT 66 9067510 0.97437354 6 65 409 0.988095238 1.618048097 0.226190476 0.257575758 0.416666667 66 0 1 83 3L:9067445-9067519 7 CG4911 FBtr0345351 9067193 9070515 TGATATT 7mer-m8 dme-miR-283-5p 3L - 9067465 9067519 3'utr CG4911 FlyBase G26916.1 AGATTGATATTCCAGTCAGGATGAAAAGTGAAGATGAGAATGATTCAAATGTTAA 50 9067510 0.889100063 5 50 283 1 1.892094603 0.230769231 0.38 0.602564103 50 0 0 78 3L:9067465-9067519 7 46 2856 FBgn0035959 1732.163333 43.72333333 67.07666667 0.026556387 1.052069833 0.685782438 -5 -5 -5 0.1 dme-miR-1008-3p 8mer-A1 AGCTGTGA 3L 9067849 9067856 - 3L_9067849_9067856_- 0.402557597 0.459106413 0.430832005 0.03998604 CG4911 FBtr0345351 9067193 9070515 3L - 9067834 9067884 3'utr CG4911 FlyBase G35572.1 TAAAAGTTATAAGAGCAAAAGTGAAGAAAGCTGTGATACAACAAGATCCAA 13 9067863 0.920346242 5 11 38 0.941176471 1.204119983 0.117647059 0.230769231 0.411764706 13 1 0 16 3L:9067834-9067884 8 CG4911 FBtr0345351 9067193 9070515 AGCTGTGA 8mer-A1 dme-miR-1008-3p 3L - 9067843 9067899 3'utr CG4911 FlyBase G26917.1 TATGCAAGTTATGCTTAAAAGTTATAAGAGCAAAAGTGAAGAAAGCTGTGATACAAC 10 9067853 0.957703963 4 8 39 0.733333333 0.740362689 0.066666667 0.4 0.6 10 3 1 11 3L:9067843-9067899 8 8 2857 FBgn0035959 1732.163333 43.72333333 67.07666667 0.004618502 0.182968667 0.119266511 7 -3 2 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG 3L 9068853 9068858 - 3L_9068853_9068858_- 0.986351534 0.967267478 0.976809506 0.013494426 CG4911 FBtr0345351 9067193 9070515 3L - 9068830 9068885 3'utr CG4911 FlyBase G35578.1 TTATGTAACCAGACCTGTTTGTATGTGGCTGTGCATTTAATTTAAGTCTAGTACGT 55 9068860 0.848040432 5 54 615 0.983050847 1.763427994 0.084745763 0.072727273 0.13559322 55 1 0 58 3L:9068830-9068885 6 CG4911 FBtr0345351 9067193 9070515 GCTGTG 6mer2-7 dme-miR-1008-3p 3L - 9068813 9068882 3'utr CG4911 FlyBase G26920.1 TGTAACCAGACCTGTTTGTATGTGGCTGTGCATTTAATTTAAGTCTAGTACGTACCAAACACAACAACCA 43 9068860 0.991976752 6 43 474 1 1.77815125 0.066666667 0.325581395 0.516666667 43 0 0 60 3L:9068813-9068882 6 46.5 2858 FBgn0035959 1732.163333 43.72333333 67.07666667 0.026845043 1.063505375 0.693236595 2 2 2 0.1 dme-miR-92b-3p 7mer-A1 TGCAATA 3L 9069042 9069048 - 3L_9069042_9069048_- 0.782911824 0.782879487 0.782895655 2.28E-05 CG4911 FBtr0345351 9067193 9070515 3L - 9069027 9069073 3'utr CG4911 FlyBase G35580.1 ATGCATGTAATCATTTTTTATGAACTGCAATAGCAAATATTATTTTT 5 9069043 0.978364312 4 5 42 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3L:9069027-9069073 7 CG4911 FBtr0345351 9067193 9070515 TGCAATA 7mer-A1 dme-miR-92b-3p 3L - 9069037 9069082 3'utr CG4911 FlyBase G26921.1 ATGTAACCAATGCATGTAATCATTTTTTATGAACTGCAATAGCAAA 5 9069054 0.984929473 4 5 35 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3L:9069037-9069082 7 3 2859 FBgn0035959 1732.163333 43.72333333 67.07666667 0.001731938 0.06861325 0.044724942 -5 6 0.5 0.1 dme-bantam-3p 7mer-A1 GATCTCA 3L 9069143 9069149 - 3L_9069143_9069149_- 0.823348403 0.823347747 0.823348075 4.95E-07 CG4911 FBtr0345351 9067193 9070515 3L - 9069108 9069178 3'utr CG4911 FlyBase G35581.1 GGGACAAGTAACAACCGCAAACAAAATGCGATCTCACAGATAACTCCTACAACTATCCAATCGACCATCTA 75 9069152 0.969327952 5 70 230 0.927710843 1.40936947 0.048192771 0.093333333 0.180722892 75 4 2 77 3L:9069108-9069178 7 CG4911 FBtr0345351 9067193 9070515 GATCTCA 7mer-A1 dme-bantam-3p 3L - 9069120 9069187 3'utr CG4911 FlyBase G26922.1 TTGGTTTCTGGGACAAGTAACAACCGCAAACAAAATGCGATCTCACAGATAACTCCTACAACTATCCA 51 9069152 0.951964142 5 44 173 0.817073171 1.826074803 0.048780488 0.450980392 0.658536585 51 15 0 67 3L:9069120-9069187 7 59.5 2860 FBgn0035959 1732.163333 43.72333333 67.07666667 0.034350109 1.360829458 0.887044675 3 3 3 0.1 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 9069239 9069246 - 3L_9069239_9069246_- 0.568457334 0.593457882 0.580957608 0.017678094 CG4911 FBtr0345351 9067193 9070515 3L - 9069205 9069269 3'utr CG4911 FlyBase G35582.1 AAACACAAAATCTATTGAAACAGAAGACTGAACGATAAAGATGGTGTTGACCTTGTTGTCAGAGC 61 9069255 0.713389076 9 53 226 0.861111111 1.792391689 0.041666667 0.163934426 0.291666667 61 10 0 62 3L:9069205-9069269 8 CG4911 FBtr0345351 9067193 9070515 AAGACTGA 8mer-A1 dme-miR-14-3p 3L - 9069212 9069273 3'utr CG4911 FlyBase G26923.1 AAACAAACACAAAATCTATTGAAACAGAAGACTGAACGATAAAGATGGTGTTGACCTTGTTG 48 9069255 0.774301356 7 42 168 0.886075949 1.544068044 0.012658228 0.416666667 0.64556962 48 8 1 70 3L:9069212-9069273 8 51 2861 FBgn0035959 1732.163333 43.72333333 67.07666667 0.029442951 1.16642525 0.760324007 9 9 9 0.1 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 3L 9069343 9069350 - 3L_9069343_9069350_- 0.674981548 0.674981637 0.674981592 7.07E-08 CG4911 FBtr0345351 9067193 9070515 3L - 9069327 9069372 3'utr CG4911 FlyBase G35583.1 AACAGCAACAACAACAAAAATGGTACCTGAAGATCATGCCGAGCAT 23 9069352 0.935337378 2 19 70 0.833333333 1.301029996 0.041666667 0.043478261 0.083333333 23 4 0 20 3L:9069327-9069372 8 CG4911 FBtr0345351 9067193 9070515 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3L - 9069318 9069370 3'utr CG4911 FlyBase G26924.1 CAGCAACAACAACAAAAATGGTACCTGAAGATCATGCCGAGCATTTAGAGAAC 17 9069352 0.927031509 3 14 47 0.833333333 1.301029996 0 0.411764706 0.583333333 17 4 0 20 3L:9069318-9069370 8 19 2862 FBgn0035959 1732.163333 43.72333333 67.07666667 0.010968942 0.434550583 0.283257964 2 2 2 0.1 dme-miR-283-5p 8mer-A1 TGATATTA 3L 9069700 9069707 - 3L_9069700_9069707_- 0.592192292 0.592192292 0.592192292 0 CG4911 FBtr0345351|FBtr0331549|FBtr0076542 9067193|9069647|9069647 9070515|9070515|9070515 3L - 9069676 9069738 3'utr CG4911 FlyBase G35586.1 CGCTAAGCGCCGCCATTTGTGTAGTTTAAAGTGATATTACCAGCAACAGCAAAGCAAAATGTA 29 9069701 0.986657182 8 26 216 0.918918919 1.531478917 0.27027027 0.206896552 0.378378378 29 3 0 34 3L:9069676-9069738 8 CG4911 FBtr0076542|FBtr0345351|FBtr0331549 9069647|9067193|9069647 9070515|9070515|9070515 TGATATTA 8mer-A1 dme-miR-283-5p 3L - 9069681 9069746 3'utr CG4911 FlyBase G26926.1 TCCTCGTTCGCTAAGCGCCGCCATTTGTGTAGTTTAAAGTGATATTACCAGCAACAGCAAAGCAAA 18 9069713 0.982269566 6 17 127 0.956521739 1.342422681 0.52173913 0.222222222 0.391304348 18 1 0 22 3L:9069681-9069746 8 20 2863 FBgn0035959 1732.163333 43.72333333 67.07666667 0.011546255 0.457421667 0.298166277 -6 6 0 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 9069795 9069801 - 3L_9069795_9069801_- 0.763643227 0.749550526 0.756596876 0.009965044 CG4911 FBtr0345351|FBtr0345351|FBtr0345351|FBtr0331549|FBtr0331549|FBtr0331549|FBtr0076542|FBtr0076542|FBtr0076542 9067193|9067193|9067193|9069647|9069647|9069647|9069647|9069647|9069647 9070515|9070515|9070515|9070515|9070515|9070515|9070515|9070515|9070515 3L - 9069784 9069841 3'utr CG4911 FlyBase G35587.1 TTTGTAGTAGTGTGAATAAGTACAGAATCTGGCGCTCAATTGTGATAAACCAACAAAC 81 9069802 0.707621314 10 73 435 0.894736842 1.327358934 0.168421053 0.135802469 0.263157895 81 7 3 85 3L:9069784-9069841 7 CG4911 FBtr0076542|FBtr0076542|FBtr0076542|FBtr0345351|FBtr0345351|FBtr0345351|FBtr0331549|FBtr0331549|FBtr0331549 9069647|9069647|9069647|9067193|9067193|9067193|9069647|9069647|9069647 9070515|9070515|9070515|9070515|9070515|9070515|9070515|9070515|9070515 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 9069762 9069823 3'utr CG4911 FlyBase G26927.1 AGTACAGAATCTGGCGCTCAATTGTGATAAACCAACAAACAACAACATAAGCAAATGTAACA 57 9069802 0.973574064 5 51 308 0.898876404 1.301029996 0.191011236 0.421052632 0.629213483 57 6 3 80 3L:9069762-9069823 7 65 2864 FBgn0035959 1732.163333 43.72333333 67.07666667 0.03752533 1.486620416 0.969040402 1 1 1 0.1 dme-miR-305-5p 8mer-A1 AGTACAAA 3L 9070214 9070221 - 3L_9070214_9070221_- 0.605654124 0.605654126 0.605654125 0 CG4911 FBtr0345351|FBtr0331549|FBtr0076542 9067193|9069647|9069647 9070515|9070515|9070515 3L - 9070152 9070253 3'utr CG4911 FlyBase G35591.1 GTAATCAAAATCGCGATTAGCCCTTGTTTATTAGTACAAAAGCGACAGATCAAGAGCGACAGGAATGTTAGGAGCAAAGCAAAAGACTTGAGCACTTCACAA 46 9070222 0.859118576 9 39 275 0.862745098 1.342422681 0.235294118 0.108695652 0.196078431 46 6 1 44 3L:9070152-9070253 8 CG4911 FBtr0076542|FBtr0345351|FBtr0331549 9069647|9067193|9069647 9070515|9070515|9070515 AGTACAAA 8mer-A1 dme-miR-305-5p 3L - 9070153 9070283 3'utr CG4911 FlyBase G26929.1 ATGTTAAATTTTCCTAATTTCTTAGCCTTTGTAATCAAAATCGCGATTAGCCCTTGTTTATTAGTACAAAAGCGACAGATCAAGAGCGACAGGAATGTTAGGAGCAAAGCAAAAGACTTGAGCACTTCACA 26 9070222 0.980559667 11 21 160 0.761904762 1.505149978 0.261904762 0.423076923 0.642857143 26 10 0 32 3L:9070153-9070283 8 24.5 2865 FBgn0035959 1732.163333 43.72333333 67.07666667 0.014144163 0.560341542 0.36525369 1 1 1 0.1 dme-miR-276a-3p 6mer3-8 AGTTCC 3L 9097232 9097237 + 3L_9097232_9097237_+ 0.529966071 0.968365484 0.749165778 0.309995189 CG13315 FBtr0076530|FBtr0340709 9097219|9097219 9097494|9097374 3L + 9097225 9097275 3'utr CG13315 FlyBase G29046.1 TAGTTTTAGTTCCGGCCTTGACATGTTCCTAATGTCGCACTAGACATACAT 77 9097234 0.73005564 8 76 572 0.989361702 1.968482949 0.138297872 0.194805195 0.340425532 77 1 0 93 3L:9097225-9097275 6 CG13315 FBtr0340709|FBtr0076530 9097219|9097219 9097374|9097494 AGTTCC 6mer3-8 dme-miR-276a-3p 3L + 9097225 9097273 3'utr CG13315 FlyBase G21984.1 TAGTTTTAGTTCCGGCCTTGACATGTTCCTAATGTCGCACTAGACATAC 47 9097234 0.716352278 9 44 369 0.918918919 1.832508913 0.22972973 0.361702128 0.594594595 47 6 0 68 3L:9097225-9097273 6 54.5 2866 FBgn0040827 102.6933333 24.86 37.96 0.53070631 2.19227675 1.435721812 -2 -2 -2 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 9097398 9097403 + 3L_9097398_9097403_+ 0.999970618 0.999995999 0.999983308 1.80E-05 CG13315 FBtr0076530 9097219 9097494 3L + 9097360 9097419 3'utr CG13315 FlyBase G29047.2 AATCGAATCTAAACGAAGCTGGCGCTACGACTTTTCATGTACCTTGGCATTATATATATA 145 9097397 0.833298411 10 139 1317 0.956790123 1.713210443 0.055555556 0.110344828 0.203703704 145 5 2 155 3L:9097360-9097419 6 CG13315 FBtr0076530 9097219 9097494 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 9097360 9097418 3'utr CG13315 FlyBase G21986.1 AATCGAATCTAAACGAAGCTGGCGCTACGACTTTTCATGTACCTTGGCATTATATATAT 78 9097397 0.840911965 8 73 679 0.946153846 2.089905111 0.023076923 0.474358974 0.684615385 78 7 0 123 3L:9097360-9097418 6 103 2867 FBgn0040827 102.6933333 24.86 37.96 1.002986237 4.143201931 2.713382508 1 1 1 0.1 dme-miR-283-5p 8mer-A1 TGATATTA 3L 9348311 9348318 + 3L_9348311_9348318_+ 0.589806618 0.589759455 0.589783037 3.33E-05 PGRP-LC FBtr0308349|FBtr0089492|FBtr0346814|FBtr0089491 9348174|9347217|9348174|9348174 9348336|9348336|9348336|9348336 3L + 9348291 9348330 3'utr PGRP-LC FlyBase G29076.1 ATTCGTTTAAAAAGAAAATGTGATATTAAATAAAACAAAA 80 9348316 0.667474309 7 73 446 0.914893617 1.33243846 0 0.1375 0.265957447 80 5 3 86 3L:9348291-9348330 8 PGRP-LC FBtr0089491|FBtr0346814|FBtr0089492|FBtr0308349 9348174|9348174|9347217|9348174 9348336|9348336|9348336|9348336 TGATATTA 8mer-A1 dme-miR-283-5p 3L + 9348291 9348332 3'utr PGRP-LC FlyBase G22004.1 ATTCGTTTAAAAAGAAAATGTGATATTAAATAAAACAAAATG 58 9348316 0.658098571 6 53 335 0.91954023 1.425968732 0.011494253 0.362068966 0.574712644 58 5 2 80 3L:9348291-9348332 8 68.5 2868 FBgn0035976 208.34 13.13 20.06 0.328789479 5.217060168 3.414755733 -5 -5 -5 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA 3L 9359565 9359570 + 3L_9359565_9359570_+ 0.999999549 0.999999145 0.999999347 2.83E-07 CG32039 FBtr0345605|FBtr0076441 9359489|9359489 9359996|9359747 3L + 9359541 9359602 3'utr CG32039 FlyBase G29083.1 GTTCCCACATCTTTACTGACTTTTGTGCAAAGTTTTTGTACTACTCCGTATTTGTATTTGTA 34 9359563 0.740841541 8 33 377 0.973684211 1.568201724 0.184210526 0.117647059 0.210526316 34 1 0 37 3L:9359541-9359602 6 CG32039 FBtr0076441|FBtr0345605 9359489|9359489 9359747|9359996 GTGCAA 6mer3-8 dme-miR-92b-3p 3L + 9359534 9359603 3'utr CG32039 FlyBase G22012.1 CAAATTTGTTCCCACATCTTTACTGACTTTTGTGCAAAGTTTTTGTACTACTCCGTATTTGTATTTGTAT 23 9359563 0.991557721 6 23 252 1 1.505149978 0.125 0.304347826 0.5 23 0 0 32 3L:9359534-9359603 6 23 2869 FBgn0052039 133.9666667 27.61666667 42.45333333 0.171684499 0.832830416 0.541771357 2 2 2 0.1 dme-miR-1008-3p 6mer3-8 AGCTGT 3L 9382624 9382629 + 3L_9382624_9382629_+ 0.999999986 0.956200997 0.978100492 0.03097057 Hsp23 FBtr0076453|FBtr0309504 9382557|9382557 9382730|9382765 3L + 9382573 9382680 3'utr Hsp23 FlyBase G29101.1 GAGATGCCCTGCATTATTTAACCATTATCAAAGTCATACATCTGTTTTATAAGCTGTAGTTATCCAAGGACACTTCACTCATACACAATAGCCATTAAGGGTGTCCTG 53 9382612 0.993966182 12 38 494 0.738461538 1.079181246 0.2 0.188679245 0.338461538 53 14 3 48 3L:9382573-9382680 6 Hsp23 FBtr0309504|FBtr0076453 9382557|9382557 9382765|9382730 AGCTGT 6mer3-8 dme-miR-1008-3p 3L + 9382589 9382660 3'utr Hsp23 FlyBase G22027.1 TTTAACCATTATCAAAGTCATACATCTGTTTTATAAGCTGTAGTTATCCAAGGACACTTCACTCATACACAA 25 9382653 0.993106824 8 19 229 0.8 1.146128036 0.171428571 0.32 0.514285714 25 6 1 28 3L:9382589-9382660 6 24 2870 FBgn0001224 279.6666667 39.84 60.63333333 0.085816448 0.602409639 0.39582188 12 -29 -8.5 0.1 dme-miR-308-3p 8mer-m1 CTGTGATT 3L 9387233 9387240 - 3L_9387233_9387240_- 0.385380536 0.385385563 0.385383049 3.61E-06 CG4080 FBtr0309506 9386825 9387784 3L - 9387145 9387359 3'utr CG4080 FlyBase G35644.1 ACTAAGTTGTCCATGCCAAAAAGCCCAAAAACCAACCAGAGACGGTAATTATTTAGTCCATGTGTAGGATGTGTTTTGTTTCTTAACTTCTAAGTCAAATGAAATTTTAAAAAATTGATCTGTGATTAAGCGTCATTGAATATACATACATAACGTGCATAAATGCAAGCAAAAACATATTGACAGCAGCCGCAGCCGTAGAAAATGCAGAAAAA 153 9387241 0.979650894 20 149 1026 0.973958333 2.271841607 0.052083333 0.215686275 0.375 153 5 0 187 3L:9387145-9387359 8 CG4080 FBtr0309506 9386825 9387784 CTGTGATT 8mer-m1 dme-miR-308-3p 3L - 9387185 9387255 3'utr CG4080 FlyBase G26958.1 TTTTAAAAAATTGATCTGTGATTAAGCGTCATTGAATATACATACATAACGTGCATAAATGCAAGCAAAAA 70 9387241 0.840737221 10 68 476 0.981481481 1.72427587 0.018518519 0.4 0.611111111 70 1 1 106 3L:9387185-9387255 8 84.5 2871 FBgn0035983 376.7 13.10666667 19.99333333 0.224316432 6.447100712 4.226408803 1 1 1 0.1 dme-bantam-3p 6mer3-8 TGATCT 3L 9387739 9387744 - 3L_9387739_9387744_- 0.99993151 0.999977062 0.999954286 3.22E-05 CG4080 FBtr0309506 9386825 9387784 3L - 9387660 9387784 3'utr CG4080 FlyBase G35646.1 AATGGAGTATCCTGCCCAACTGATCTGATGTGATCCACTATGATCTGCGCGCTCTTTCTCCCCCCAATAAGCTCTGCTCTCTCAAGTATTCACCGCTGGTCGACGGAGACCCCGAGATCCACATA 95 9387726 0.980145537 20 89 626 0.948717949 1.744292983 0.213675214 0.178947368 0.333333333 95 5 1 111 3L:9387660-9387784 6 CG4080 FBtr0076494|FBtr0309506 9387507|9386825 9387784|9387784 TGATCT 6mer3-8 dme-bantam-3p 3L - 9387670 9387788 stop_codon CG4080 FlyBase G26961.1 GTGAAATGGAGTATCCTGCCCAACTGATCTGATGTGATCCACTATGATCTGCGCGCTCTTTCTCCCCCCAATAAGCTCTGCTCTCTCAAGTATTCACCGCTGGTCGACGGAGACCCCGA 76 9387727 0.977708638 15 70 489 0.922330097 1.67669361 0.174757282 0.289473684 0.475728155 76 7 1 95 3L:9387670-9387788 6 42.5 2872 FBgn0035983 376.7 13.10666667 19.99333333 0.112821874 3.242624619 2.12570857 -18 -17 -17.5 0.1 dme-bantam-3p 7mer-m8 TGATCTC 3L 9407489 9407495 - 3L_9407489_9407495_- 0.661572579 0.661567681 0.66157013 3.46E-06 CG4022 FBtr0309089 9406177 9408212 3L - 9407467 9407567 3'utr CG4022 FlyBase G35671.2 ATATCCATATCCATATCCGTGCAAAAGTATTAAGAAACTTCGCAGATCCAAGAACCCTAACCCTGGATCGATTGATCTCCACGCTTTGAAGTTGAGGGGCA 285 9407496 0.984614598 8 271 2191 0.956140351 2.037426498 0.064327485 0.161403509 0.301169591 285 13 2 327 3L:9407467-9407567 7 CG4022 FBtr0309089 9406177 9408212 TGATCTC 7mer-m8 dme-bantam-3p 3L - 9407459 9407550 3'utr CG4022 FlyBase G26976.1 CGTGCAAAAGTATTAAGAAACTTCGCAGATCCAAGAACCCTAACCCTGGATCGATTGATCTCCACGCTTTGAAGTTGAGGGGCAGTGAAAAC 155 9407496 0.976225355 11 146 1116 0.931623932 2.338456494 0.068376068 0.367741935 0.581196581 155 16 0 218 3L:9407459-9407550 7 199.5 2873 FBgn0035986 448.2433333 14.32333333 21.92 0.445070758 13.92832209 9.101277372 1 1 1 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3L 9412348 9412354 + 3L_9412348_9412354_+ 0.661596188 0.661591955 0.661594071 2.97E-06 CG3689 FBtr0076456 9412188 9413637 3L + 9412306 9412378 3'utr CG3689 FlyBase G29117.1 ATCGCAAAAGCTGGCGCAGGCGACTCCTTAGTTAGTTTTGATTCTAGTCCAATTGTACAACATGTCGAAAATC 82 9412347 0.975292757 6 79 809 0.972222222 2.021189299 0.5 0.256097561 0.435185185 82 3 0 105 3L:9412306-9412378 7 CG3689 FBtr0076456 9412188 9413637 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 9412317 9412421 3'utr CG3689 FlyBase G22034.1 TGGCGCAGGCGACTCCTTAGTTAGTTTTGATTCTAGTCCAATTGTACAACATGTCGAAAATCAAATTCAAATTGTATTTTTGCTCAGGACTGAGTGTTGGCATAT 68 9412347 0.970091217 10 65 662 0.979591837 1.982271233 0.428571429 0.382352941 0.571428571 68 2 0 96 3L:9412317-9412421 7 68.5 2874 FBgn0035987 792 73.75 112.5233333 0.086489899 0.928813559 0.608762627 1 1 1 0.1 dme-miR-1003-3p 7mer-A1 TGTGAGA 3L 9412500 9412506 + 3L_9412500_9412506_+ 0.699326279 0.747127925 0.723227102 0.033800836 CG3689 FBtr0076456 9412188 9413637 3L + 9412447 9412523 3'utr CG3689 FlyBase G29119.1 TCGAAATTCAAAGATTGTTCTTGTACTTAATTTTGTAAATATGTCGACATACTTGTGAGACTGAGCGCAGCAATGTT 85 9412501 0.965089625 8 80 584 0.946808511 1.949390007 0.308510638 0.094117647 0.180851064 85 5 0 89 3L:9412447-9412523 7 CG3689 FBtr0076456 9412188 9413637 TGTGAGA 7mer-A1 dme-miR-1003-3p 3L + 9412449 9412533 3'utr CG3689 FlyBase G22035.1 GAAATTCAAAGATTGTTCTTGTACTTAATTTTGTAAATATGTCGACATACTTGTGAGACTGAGCGCAGCAATGTTATCCTTCTAT 57 9412501 0.872860357 8 49 409 0.821917808 1.301029996 0.328767123 0.228070175 0.397260274 57 11 2 60 3L:9412449-9412533 7 58.5 2875 FBgn0035987 792 73.75 112.5233333 0.073863636 0.793220339 0.519892171 -1 -1 -1 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3L 9414949 9414955 - 3L_9414949_9414955_- 0.521223811 0.521223744 0.521223777 7.07E-08 CG3967 FBtr0076480|FBtr0331584 9414836|9414836 9415286|9415286 3L - 9414915 9414974 3'utr CG3967 FlyBase G35677.1 ACGAAAATACCTGACAAATTGTGATTACAACATATATAACTTATCATTTAACATTTAACT 35 9414956 0.975144011 4 34 216 0.97826087 1.653212514 0.065217391 0.228571429 0.413043478 35 1 0 45 3L:9414915-9414974 7 CG3967 FBtr0076480|FBtr0331584 9414836|9414836 9415286|9415286 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 9414934 9414973 3'utr CG3967 FlyBase G26981.1 CGAAAATACCTGACAAATTGTGATTACAACATATATAACT 23 9414956 0.681656845 3 23 126 1 1.491361694 0.032258065 0.347826087 0.516129032 23 0 0 31 3L:9414934-9414973 7 28.5 2876 FBgn0035989 353.1 23.02 35.35666667 0.080713679 1.238053866 0.806071462 1 1 1 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 3L 9415180 9415186 - 3L_9415180_9415186_- 0.782865691 0.782849857 0.782857774 1.12E-05 CG3967 FBtr0076480|FBtr0331584 9414836|9414836 9415286|9415286 3L - 9415175 9415225 3'utr CG3967 FlyBase G35678.1 CGACACTAGATAAACTGATATATCAACTAAATAACCATTGTACAAAGCTTT 8 9415188 0.971316898 4 7 43 0.833333333 1 0 0.375 0.583333333 8 2 0 10 3L:9415175-9415225 7 CG3967 FBtr0076480|FBtr0331584 9414836|9414836 9415286|9415286 GTACAAA 7mer-A1 dme-miR-305-5p 3L - 9415148 9415197 3'utr CG3967 FlyBase G26982.1 AAATAACCATTGTACAAAGCTTTGATTTTAGCCAATTATTTATATTTTCG 11 9415188 0.973106305 3 11 73 1 1.204119983 0 0.272727273 0.5 11 0 0 16 3L:9415148-9415197 7 8.5 2877 FBgn0035989 353.1 23.02 35.35666667 0.024072501 0.369244136 0.240407278 2 2 2 0.1 dme-miR-8-3p 6mer2-7 AGTATT 3L 9424401 9424406 + 3L_9424401_9424406_+ 0.999933429 0.999959306 0.999946368 1.83E-05 aay FBtr0076457 9424361 9424781 3L + 9424371 9424438 3'utr aay FlyBase G29129.1 TACGTAAGGCGGTGGGGGAGTGGCGAATTTAGTATTTGAAATCAACGTGTTATAGCTCGTAGTGATGC 14 9424407 0.973040404 7 12 101 0.9375 0.875061263 0.25 0.142857143 0.25 14 0 1 15 3L:9424371-9424438 6 aay FBtr0076457 9424361 9424781 AGTATT 6mer2-7 dme-miR-8-3p 3L + 9424370 9424454 3'utr aay FlyBase G22041.1 ATACGTAAGGCGGTGGGGGAGTGGCGAATTTAGTATTTGAAATCAACGTGTTATAGCTCGTAGTGATGCACATGTTTATGCCCAA 16 9424409 0.979943091 7 14 102 0.869565217 1.301029996 0.52173913 0.375 0.565217391 16 3 0 20 3L:9424370-9424454 6 7.5 2878 FBgn0023129 178.6666667 14.14 21.50666667 0.041977612 0.530410184 0.348729076 -6 -8 -7 0.1 dme-miR-8-3p 7mer-m8 CAGTATT 3L 9428632 9428638 + 3L_9428632_9428638_+ 0.661610754 0.64958075 0.655595752 0.008506565 Shc FBtr0076458 9428433 9428671 3L + 9428612 9428673 3'utr Shc FlyBase G29140.1 TACAAATATGTGCATGTCTACAGTATTTTCCATTCGAATGCGAATAAAGATGATAAACGGAA 21 9428639 0.991320174 5 19 195 0.916666667 1.342422681 0.208333333 0.142857143 0.25 21 2 0 22 3L:9428612-9428673 7 Shc FBtr0076458 9428433 9428671 CAGTATT 7mer-m8 dme-miR-8-3p 3L + 9428615 9428658 3'utr Shc FlyBase G22052.1 AAATATGTGCATGTCTACAGTATTTTCCATTCGAATGCGAATAA 22 9428639 0.693836988 4 20 193 0.911764706 1.491361694 0.205882353 0.409090909 0.617647059 22 3 0 31 3L:9428615-9428658 7 20 2879 FBgn0015296 548 41.97 64.36666667 0.03649635 0.476530855 0.310719834 -7 -7 -7 0.1 dme-miR-8-3p 6mer2-7 AGTATT 3L 9438031 9438036 + 3L_9438031_9438036_+ 0.95120165 0.987977425 0.969589537 0.026004418 MTF-1 FBtr0113323|FBtr0344237|FBtr0113324|FBtr0113322|FBtr0076459|FBtr0076460 9437921|9437921|9437921|9437921|9437921|9437921 9438711|9438711|9438704|9438711|9438711|9438711 3L + 9438011 9438045 3'utr MTF-1 FlyBase G29148.1 CTGGTATTGGGCCTGTAAAAAGTATTTTTCCCATT 10 9438037 0.685568208 3 10 94 1 1.113943352 0 0.2 0.384615385 10 0 0 13 3L:9438011-9438045 6 MTF-1 FBtr0076460|FBtr0076459|FBtr0113322|FBtr0113324|FBtr0344237|FBtr0113323 9437921|9437921|9437921|9437921|9437921|9437921 9438711|9438711|9438711|9438704|9438711|9438711 AGTATT 6mer2-7 dme-miR-8-3p 3L + 9437999 9438045 3'utr MTF-1 FlyBase G22057.1 AGAAATTTGAAACTGGTATTGGGCCTGTAAAAAGTATTTTTCCCATT 12 9438037 0.981729851 3 12 99 1 1.230448921 0 0.166666667 0.411764706 12 0 0 17 3L:9437999-9438045 6 10 2880 FBgn0040305 420.6966667 14.72 22.57 0.023770096 0.679347826 0.443066017 -6 -6 -6 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 9438111 9438116 + 3L_9438111_9438116_+ 0.730949198 0.7309494 0.730949299 1.41E-07 MTF-1 FBtr0113323|FBtr0113323|FBtr0113323|FBtr0344237|FBtr0344237|FBtr0344237|FBtr0113324|FBtr0113324|FBtr0113324|FBtr0113322|FBtr0113322|FBtr0113322|FBtr0076459|FBtr0076459|FBtr0076459|FBtr0076460|FBtr0076460|FBtr0076460 9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921 9438711|9438711|9438711|9438711|9438711|9438711|9438704|9438704|9438704|9438711|9438711|9438711|9438711|9438711|9438711|9438711|9438711|9438711 3L + 9438067 9438156 3'utr MTF-1 FlyBase G29149.1 ACAAAAAATATCAAAGTGCATTTAAGTGAAACGATTCAATCATATGTGATCCCAGCGGAGGCTGGCCGCGCTATCCCAAAACCTACTATA 83 9438109 0.876780308 15 61 459 0.739130435 1.355387658 0.195652174 0.096385542 0.184782609 83 22 2 68 3L:9438067-9438156 6 MTF-1 FBtr0076460|FBtr0076460|FBtr0076460|FBtr0076459|FBtr0076459|FBtr0076459|FBtr0113322|FBtr0113322|FBtr0113322|FBtr0113324|FBtr0113324|FBtr0113324|FBtr0344237|FBtr0344237|FBtr0344237|FBtr0113323|FBtr0113323|FBtr0113323 9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921 9438711|9438711|9438711|9438711|9438711|9438711|9438711|9438711|9438711|9438704|9438704|9438704|9438711|9438711|9438711|9438711|9438711|9438711 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 9438070 9438155 3'utr MTF-1 FlyBase G22058.1 AAAAATATCAAAGTGCATTTAAGTGAAACGATTCAATCATATGTGATCCCAGCGGAGGCTGGCCGCGCTATCCCAAAACCTACTAT 64 9438110 0.785474249 13 44 323 0.673076923 1.544068044 0.240384615 0.40625 0.634615385 64 33 1 70 3L:9438070-9438155 6 62 2881 FBgn0040305 420.6966667 14.72 22.57 0.147374593 4.211956522 2.747009304 2 1 1.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 9452519 9452524 + 3L_9452519_9452524_+ 0.999810322 0.99993174 0.999871031 8.58E-05 ghi FBtr0076462 9452442 9452790 3L + 9452451 9452543 3'utr ghi FlyBase G29163.1 ATCAGACCATGCCCAGACCAATCGTGTGTACTGTTCTCCGTTCCAATATCCAAAATAGCCGCGTATCTGTACCTCGCCGCGATGCTTTATCTA 78 9452518 0.974159938 8 74 454 0.96 1.681241237 0.25 0.230769231 0.4 78 3 1 96 3L:9452451-9452543 6 ghi FBtr0076462 9452442 9452790 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 9452502 9452542 3'utr ghi FlyBase G22069.1 AAAATAGCCGCGTATCTGTACCTCGCCGCGATGCTTTATCT 56 9452518 0.686048634 6 55 295 0.987654321 1.903089987 0.296296296 0.357142857 0.555555556 56 1 0 80 3L:9452502-9452542 6 60 2882 FBgn0266124 200.3333333 37.04333333 56.53333333 0.299500832 1.619724647 1.061320755 1 1 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3L 9452604 9452610 + 3L_9452604_9452610_+ 0.524393058 0.822697681 0.673545369 0.210933206 ghi FBtr0076462 9452442 9452790 3L + 9452557 9452633 3'utr ghi FlyBase G29164.1 TATACACCGCAATCAATGAATGGAACGTAGCTGTAGGCGACACATGTCCAAAGAGGCGATCTAATCGCTTGCTGATC 10 9452574 0.938015005 6 10 41 1 1.041392685 0.363636364 0.1 0.181818182 10 0 0 11 3L:9452557-9452633 7 ghi FBtr0076462 9452442 9452790 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 9452572 9452620 3'utr ghi FlyBase G22070.1 ATGAATGGAACGTAGCTGTAGGCGACACATGTCCAAAGAGGCGATCTAA 7 9452601 0.923469352 4 6 21 1 1.113943352 0.307692308 0.714285714 0.846153846 7 0 0 13 3L:9452572-9452620 7 5 2883 FBgn0266124 200.3333333 37.04333333 56.53333333 0.024958403 0.134977054 0.088443396 30 3 16.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 9452758 9452763 + 3L_9452758_9452763_+ 0.913269736 0.958951797 0.936110766 0.032302123 ghi FBtr0076462|FBtr0076462|FBtr0076462 9452442|9452442|9452442 9452790|9452790|9452790 3L + 9452731 9452778 3'utr ghi FlyBase G29166.1 AATAAATCTAACGCTTACACAATCGCACTGTGAAATAGTTAAAAAAAG 17 9452766 0.711981419 5 14 86 0.884615385 1.361727836 0.192307692 0.352941176 0.576923077 17 3 0 23 3L:9452731-9452778 6 ghi FBtr0076462|FBtr0076462|FBtr0076462 9452442|9452442|9452442 9452790|9452790|9452790 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 9452637 9452774 3'utr ghi FlyBase G22071.1 ATCTGAAGTGGACAACACCCGGCGACTGTCCATCAATAGCTGCCTCACCGTTTAATGTAGTTATCTAGCAGTAGTTACAAGTTTAAAGTCAGTTAATAAATCTAACGCTTACACAATCGCACTGTGAAATAGTTAAAA 22 9452766 0.93214717 12 19 129 0.909090909 1.477121255 0.121212121 0.409090909 0.606060606 22 3 0 30 3L:9452637-9452774 6 12 2884 FBgn0266124 200.3333333 37.04333333 56.53333333 0.059900166 0.323944929 0.212264151 -8 -8 -8 0.1 dme-bantam-3p 6mer3-8 TGATCT 3L 9453120 9453125 - 3L_9453120_9453125_- 0.999999371 0.999999523 0.999999447 7.07E-08 phol FBtr0076475|FBtr0345600 9453046|9452801 9453529|9453529 3L - 9453086 9453238 3'utr phol FlyBase G35697.1 AGTTCTAAGAGTTTAGCTTGTACCGTAGGCTAAGTGAGTCCCCCCGCAAAACCAAAACTGAACCGTAATCCCCGAAGAACTCAGCCAAACTGTCACCTTAAAAAGCCCCAATTTGATCTGATACTAATCGTGTGCGATCTTCGCTCGAATAAC 163 9453126 0.970284628 14 157 899 0.971014493 1.826074803 0.004830918 0.226993865 0.391304348 163 4 2 201 3L:9453086-9453238 6 phol FBtr0076475|FBtr0345600 9453046|9452801 9453529|9453529 TGATCT 6mer3-8 dme-bantam-3p 3L - 9453103 9453143 3'utr phol FlyBase G26995.1 CCTTAAAAAGCCCCAATTTGATCTGATACTAATCGTGTGCG 100 9453126 0.961073316 6 98 546 0.980645161 2.181843588 0.012903226 0.38 0.6 100 3 0 152 3L:9453103-9453143 6 121.5 2885 FBgn0035997 881.8933333 31.6 48.47 0.137771764 3.844936709 2.506705178 1 1 1 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA 3L 9453289 9453294 - 3L_9453289_9453294_- 0.930303688 0.954800021 0.942551855 0.0173215 phol FBtr0076475|FBtr0345600 9453046|9452801 9453529|9453529 3L - 9453266 9453314 3'utr phol FlyBase G35698.1 TCTAACAAAATAGGATTGCAGTGCAAAAGGAAGTTAGATGGTAGCCATT 12 9453298 0.943150311 4 11 46 1 1.079181246 0 0 0 12 0 0 12 3L:9453266-9453314 6 phol FBtr0076475|FBtr0345600 9453046|9452801 9453529|9453529 GTGCAA 6mer3-8 dme-miR-92b-3p 3L - 9453266 9453315 3'utr phol FlyBase G26997.1 CTCTAACAAAATAGGATTGCAGTGCAAAAGGAAGTTAGATGGTAGCCATT 11 9453298 0.895046873 3 9 48 1 1.079181246 0 0.090909091 0.166666667 11 0 0 12 3L:9453266-9453315 6 9 2886 FBgn0035997 881.8933333 31.6 48.47 0.010205316 0.284810127 0.185681865 4 4 4 0.1 dme-miR-283-5p 7mer-m1 GATATTT 3L 9475735 9475741 - 3L_9475735_9475741_- 0.765044201 0.765273994 0.765159097 0.000162493 Uch-L5 FBtr0076472 9475491 9475793 3L - 9475723 9475810 stop_codon Uch-L5 FlyBase G35723.1 AAAAGGATACCGACTAAGCATTTACAGTATATATTTAAAATTTCCCGTTGGACAATTTAAAATTGCTGCGATATTTGAAATAAAAGAA 74 9475748 0.909836493 12 70 665 0.941860465 1.908485019 0.069767442 0.162162162 0.279069767 74 5 0 81 3L:9475723-9475810 7 Uch-L5 FBtr0076472 9475491 9475793 GATATTT 7mer-m1 dme-miR-283-5p 3L - 9475721 9475795 stop_codon Uch-L5 FlyBase G27011.1 AAGCATTTACAGTATATATTTAAAATTTCCCGTTGGACAATTTAAAATTGCTGCGATATTTGAAATAAAAGAAAA 47 9475748 0.990377203 7 42 443 0.911764706 1.315270435 0.058823529 0.361702128 0.558823529 47 4 2 62 3L:9475721-9475795 7 55.5 2887 FBgn0011327 635.3333333 61.73666667 94.22333333 0.087355719 0.898979537 0.589026073 7 7 7 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3L 9485714 9485720 + 3L_9485714_9485720_+ 0.443131014 0.443131018 0.443131016 0 Jarid2 FBtr0076468 9485591 9486530 3L + 9485696 9485767 3'utr Jarid2 FlyBase G29207.1 AAGAAATGTGTATACCTATGTGATTCGCCATCGCTAGTGAGCAGATAATTGATAATTGGGTGAAATATAGAA 41 9485720 0.735398812 9 40 294 0.981481481 1.72427587 0.148148148 0.219512195 0.407407407 41 1 0 53 3L:9485696-9485767 7 Jarid2 FBtr0076468 9485591 9486530 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 9485700 9485740 3'utr Jarid2 FlyBase G22094.1 AATGTGTATACCTATGTGATTCGCCATCGCTAGTGAGCAGA 25 9485719 0.861979896 6 24 168 0.96875 1.491361694 0.1875 0.2 0.375 25 1 0 31 3L:9485700-9485740 7 29.5 2888 FBgn0036004 1195.756667 17.17 26.52666667 0.024670571 1.718112988 1.112088464 -6 -5 -5.5 0.1 dme-miR-1012-3p 8mer-A1 TTGACTAA 3L 9485831 9485838 + 3L_9485831_9485838_+ 0.618444783 0.437812871 0.528128827 0.127726041 Jarid2 FBtr0076468 9485591 9486530 3L + 9485794 9485868 3'utr Jarid2 FlyBase G29208.1 ACAAAACACACATATTAATGCAACGTTTATCTCCCAGTTGACTAACTGACACTATTACTAACTGTAAGATAAGAG 16 9485831 0.962604106 8 15 102 0.954545455 1.021189299 0.318181818 0.3125 0.5 16 0 1 21 3L:9485794-9485868 8 Jarid2 FBtr0076468 9485591 9486530 TTGACTAA 8mer-A1 dme-miR-1012-3p 3L + 9485760 9485853 3'utr Jarid2 FlyBase G22095.1 ATATAGAAATGTCTACGAGTTAATCCATGGACACACAAAACACACATATTAATGCAACGTTTATCTCCCAGTTGACTAACTGACACTATTACTA 19 9485808 0.995888613 7 17 109 0.913043478 1.021189299 0 0.210526316 0.347826087 19 1 1 21 3L:9485760-9485853 8 9 2889 FBgn0036004 1195.756667 17.17 26.52666667 0.007526615 0.524170064 0.339281226 0 23 11.5 0.1 dme-miR-33-5p 6mer3-8 CAATGC 3L 9485916 9485921 + 3L_9485916_9485921_+ 0.861131031 0.999389531 0.930260281 0.097763523 Jarid2 FBtr0076468 9485591 9486530 3L + 9485870 9485941 3'utr Jarid2 FlyBase G29209.1 GTAGGATCGGATATAGAGAGATGTAACTGTTCATATTTCAACGTGGCAATGCTTTCAATTTTGACTAGTTTA 25 9485899 0.742998261 6 25 190 1 1.462397998 0.137931034 0.16 0.275862069 25 0 0 29 3L:9485870-9485941 6 Jarid2 FBtr0076468 9485591 9486530 CAATGC 6mer3-8 dme-miR-33-5p 3L + 9485872 9485935 3'utr Jarid2 FlyBase G22096.1 AGGATCGGATATAGAGAGATGTAACTGTTCATATTTCAACGTGGCAATGCTTTCAATTTTGACT 17 9485891 0.825177105 6 17 127 1 1.414973348 0 0.352941176 0.576923077 17 0 0 26 3L:9485872-9485935 6 5 2890 FBgn0036004 1195.756667 17.17 26.52666667 0.004181453 0.291205591 0.18848957 17 25 21 0.1 dme-miR-79-3p 7mer-m8 TAGCTTT 3L 9486099 9486105 + 3L_9486099_9486105_+ 0.606148259 0.619943817 0.613046038 0.009754892 Jarid2 FBtr0076468 9485591 9486530 3L + 9486056 9486179 3'utr Jarid2 FlyBase G29210.1 TATTGTATATAGAGAGCCTTAGTGTATGTACGTACTACGTAGTTAGCTTTCGAATTAAGTCAAAGACCCTCAAAGAAACCATGCTAACGTGTTGCAATTTCTACTACCTTTTATACGCTAAGAT 26 9486076 0.988620572 15 24 224 0.965517241 1.447158031 0.103448276 0.076923077 0.172413793 26 1 0 28 3L:9486056-9486179 7 Jarid2 FBtr0076468 9485591 9486530 TAGCTTT 7mer-m8 dme-miR-79-3p 3L + 9486061 9486115 3'utr Jarid2 FlyBase G22097.1 TATATAGAGAGCCTTAGTGTATGTACGTACTACGTAGTTAGCTTTCGAATTAAGT 11 9486074 0.986847544 6 10 95 0.928571429 1.113943352 0.142857143 0.272727273 0.428571429 11 1 0 13 3L:9486061-9486115 7 8.5 2891 FBgn0036004 1195.756667 17.17 26.52666667 0.00710847 0.495049505 0.320432269 23 25 24 0.1 dme-miR-965-3p 6mer3-8 TACGCT 3L 9486169 9486174 + 3L_9486169_9486174_+ 0.999962169 0.999963826 0.999962998 1.13E-06 Jarid2 FBtr0076468 9485591 9486530 3L + 9486056 9486179 3'utr Jarid2 FlyBase G29210.1 TATTGTATATAGAGAGCCTTAGTGTATGTACGTACTACGTAGTTAGCTTTCGAATTAAGTCAAAGACCCTCAAAGAAACCATGCTAACGTGTTGCAATTTCTACTACCTTTTATACGCTAAGAT 26 9486166 0.988620572 15 24 224 0.965517241 1.447158031 0.103448276 0.076923077 0.172413793 26 1 0 28 3L:9486056-9486179 6 Jarid2 FBtr0076468 9485591 9486530 TACGCT 6mer3-8 dme-miR-965-3p 3L + 9486144 9486170 3'utr Jarid2 FlyBase G22098.1 GTGTTGCAATTTCTACTACCTTTTATA 6 9486166 0.677102956 2 6 59 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3L:9486144-9486170 2 5.5 2892 FBgn0036004 1195.756667 17.17 26.52666667 0.004599598 0.32032615 0.207338527 3 3 3 0.1 dme-miR-307a-3p 7mer-A1 GTTGTGA 3L 9486340 9486346 + 3L_9486340_9486346_+ 0.550193987 0.742842412 0.6465182 0.13622299 Jarid2 FBtr0076468 9485591 9486530 3L + 9486311 9486382 3'utr Jarid2 FlyBase G29211.1 GAAAGCCAGAGTTACTATCGCTGACTGAAGTTGTGAGGCGGGACAACCCAAGACGTACTGTTCATTCAACCA 7 9486342 0.93294359 5 7 29 1 0.903089987 0.5 0.142857143 0.25 7 0 0 8 3L:9486311-9486382 7 Jarid2 FBtr0076468 9485591 9486530 GTTGTGA 7mer-A1 dme-miR-307a-3p 3L + 9486317 9486362 3'utr Jarid2 FlyBase G22099.1 CAGAGTTACTATCGCTGACTGAAGTTGTGAGGCGGGACAACCCAAG 11 9486344 0.973219582 5 9 56 0.928571429 1.113943352 0.285714286 0.272727273 0.428571429 11 1 0 13 3L:9486317-9486362 7 8 2893 FBgn0036004 1195.756667 17.17 26.52666667 0.006690324 0.465928946 0.301583312 -2 -4 -3 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3L 9486489 9486495 - 3L_9486489_9486495_- 0.808818799 0.808818744 0.808818771 7.07E-08 pall FBtr0076471|FBtr0076471 9486446|9486446 9486622|9486622 3L - 9486448 9486554 3'utr pall FlyBase G35731.1 AGCATTAATTAGGCAGTGCATCTTCGATATATCGCGTTAAGATTTATTGTTGCACTTGTTACTTAAATATTGTATTACTACTATATAAATACATTGAACATCTAGTG 12 9486498 0.99437503 7 11 120 0.916666667 0.740362689 0.083333333 0 0 12 0 1 11 3L:9486448-9486554 7 pall FBtr0076471|FBtr0076471 9486446|9486446 9486622|9486622 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3L - 9486465 9486509 3'utr pall FlyBase G27015.1 ATTGTTGCACTTGTTACTTAAATATTGTATTACTACTATATAAAT 8 9486485 0.787775698 5 8 95 1 1.041392685 0 0.375 0.545454545 8 0 0 11 3L:9486465-9486509 7 7.5 2894 FBgn0036005 105.5133333 10.81333333 16.61 0.071081064 0.693588163 0.45153522 3 -10 -3.5 0.1 dme-miR-932-5p 6mer2-7 GAATTG 3L 9494988 9494993 - 3L_9494988_9494993_- 0.999993825 0.938926948 0.969460386 0.043180819 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 3L - 9494884 9495010 3'utr path FlyBase G35739.1 GAGTAATAAGTTACATTGAATTGCCCCGATATTCACTATGTGTAAACATACTTATTTTGTTGCATACATATTTTTGTATTTTAATTATAGCTATTAAAGAGAAATACTTAGCGAAACTATCAAGTAA 28 9494990 0.986577132 11 22 211 0.878787879 1.462397998 0.060606061 0.178571429 0.303030303 28 4 0 29 3L:9494884-9495010 6 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 GAATTG 6mer2-7 dme-miR-932-5p 3L - 9494974 9495005 3'utr path FlyBase G27021.1 ATAAGTTACATTGAATTGCCCCGATATTCACT 11 9494991 0.649993773 4 10 76 0.947368421 1.255272505 0.052631579 0.545454545 0.736842105 11 1 0 18 3L:9494974-9495005 6 13 2895 FBgn0036007 512.66 22.65333333 35.05666667 0.025357937 0.573866981 0.370828183 -3 -2 -2.5 0.1 dme-miR-276a-3p 6mer3-8 AGTTCC 3L 9495066 9495071 - 3L_9495066_9495071_- 0.999997995 0.99999604 0.999997017 1.41E-06 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 3L - 9495044 9495088 3'utr path FlyBase G35740.1 CTATTTTGCAATCGATCAGTTCCAAATATGTTGAGCTAAATTACT 24 9495069 0.846063913 5 23 196 0.96 1.079181246 0.08 0.041666667 0.08 24 0 1 24 3L:9495044-9495088 6 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 AGTTCC 6mer3-8 dme-miR-276a-3p 3L - 9495052 9495086 3'utr path FlyBase G27022.1 ATTTTGCAATCGATCAGTTCCAAATATGTTGAGCT 14 9495069 0.853252409 2 11 93 0.85 0.929418926 0.2 0.357142857 0.55 14 2 1 17 3L:9495052-9495086 6 15 2896 FBgn0036007 512.66 22.65333333 35.05666667 0.029259158 0.662154208 0.427878673 -2 -2 -2 0.1 dme-miR-995-5p 6mer3-8 AATTCG 3L 9495160 9495165 - 3L_9495160_9495165_- 1 1 1 0 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 3L - 9495144 9495190 3'utr path FlyBase G35741.1 CCCACTTTTACTTTGTTCCGTGGCAAATTCGCGTGATTTGCGTACAT 40 9495177 0.586167386 14 35 338 0.875 1.62324929 0.104166667 0.15 0.291666667 40 6 0 42 3L:9495144-9495190 6 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 AATTCG 6mer3-8 dme-miR-995-5p 3L - 9495108 9495189 3'utr path FlyBase G27023.1 CCACTTTTACTTTGTTCCGTGGCAAATTCGCGTGATTTGCGTACATTATTTAACATTTTAGCATGTTTAGTAAGTAAGCGTA 36 9495177 0.681578625 15 33 360 0.905660377 1.681241237 0.188679245 0.361111111 0.566037736 36 5 0 48 3L:9495108-9495189 6 26 2897 FBgn0036007 512.66 22.65333333 35.05666667 0.050715874 1.147733961 0.741656366 12 12 12 0.1 dme-miR-282-5p 7mer-m8 AGAGGCT 3L 9495298 9495304 - 3L_9495298_9495304_- 0.631524568 0.631524569 0.631524568 0 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 3L - 9495235 9495509 3'utr path FlyBase G35742.1 CTACCGAGCACCATTATGCCGTTTTAGCACGTTTTAGTACACTCGCGATTATATAATGTAGAGAGTAAGCTAGTTGATAGCCGTTCAGAAACACTTTTAGAACAGTTCTGAACGATTCAAGCGGCATTCAAACTGGAACTTTACTAAGTGCACTTTAATAGTTTCCTATTGATTTCCTATTAATACCATTTAGTATGGATCTGTAAGAGGCTTAGTTACGTACCATCCTCCAAAAATCCCCACCCTTTCCTCTCTGTTCTAAAATAGTATTACTC 153 9495297 0.925718003 52 145 1226 0.95212766 1.775731776 0.14893617 0.189542484 0.340425532 153 7 2 179 3L:9495235-9495509 7 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 AGAGGCT 7mer-m8 dme-miR-282-5p 3L - 9495290 9495353 3'utr path FlyBase G27024.2 AATAGTTTCCTATTGATTTCCTATTAATACCATTTAGTATGGATCTGTAAGAGGCTTAGTTACG 47 9495297 0.679395505 14 45 391 0.96875 1.792391689 0.078125 0.319148936 0.5 47 2 0 62 3L:9495290-9495353 7 42 2898 FBgn0036007 512.66 22.65333333 35.05666667 0.081925643 1.854031783 1.198060283 -7 -7 -7 0.1 dme-miR-34-5p 7mer-A1 ACTGCCA 3L 9507401 9507407 - 3L_9507401_9507407_- 0.7009451 0.741751911 0.721348505 0.028854765 CG3408 FBtr0076426|FBtr0333863 9506816|9506816 9507578|9507578 3L - 9507354 9507484 3'utr CG3408 FlyBase G35760.1 AATTCAAAATGAGATACGTGTTGACCACCTGAACGAGTTATACGACTGCTACTTTGATATACCATTATCTGTAATTTACTGCCATTTATTTTGATAGACACTAAGCCCACTACGTCCATTGAAGGGAGATT 98 9507435 0.804423284 23 93 690 0.947826087 2.037426498 0.295652174 0.153061224 0.27826087 98 6 0 109 3L:9507354-9507484 7 CG3408 FBtr0076426|FBtr0333863 9506816|9506816 9507578|9507578 ACTGCCA 7mer-A1 dme-miR-34-5p 3L - 9507354 9507484 3'utr CG3408 FlyBase G27043.1 AATTCAAAATGAGATACGTGTTGACCACCTGAACGAGTTATACGACTGCTACTTTGATATACCATTATCTGTAATTTACTGCCATTTATTTTGATAGACACTAAGCCCACTACGTCCATTGAAGGGAGATT 90 9507436 0.987277269 25 82 724 0.920863309 1.26211193 0.258992806 0.4 0.611510791 90 5 6 128 3L:9507354-9507484 7 26 2899 FBgn0036008 265.6766667 17.37666667 26.79 0.097863318 1.496259352 0.970511385 28 29 28.5 0.1 dme-miR-1002-5p 6mer3-8 CTACTT 3L 9507431 9507436 - 3L_9507431_9507436_- 0.944320836 0.906586276 0.925453556 0.026682321 CG3408 FBtr0076426|FBtr0333863 9506816|9506816 9507578|9507578 3L - 9507354 9507484 3'utr CG3408 FlyBase G35760.1 AATTCAAAATGAGATACGTGTTGACCACCTGAACGAGTTATACGACTGCTACTTTGATATACCATTATCTGTAATTTACTGCCATTTATTTTGATAGACACTAAGCCCACTACGTCCATTGAAGGGAGATT 98 9507435 0.804423284 23 93 690 0.947826087 2.037426498 0.295652174 0.153061224 0.27826087 98 6 0 109 3L:9507354-9507484 6 CG3408 FBtr0076426|FBtr0333863 9506816|9506816 9507578|9507578 CTACTT 6mer3-8 dme-miR-1002-5p 3L - 9507354 9507484 3'utr CG3408 FlyBase G27043.1 AATTCAAAATGAGATACGTGTTGACCACCTGAACGAGTTATACGACTGCTACTTTGATATACCATTATCTGTAATTTACTGCCATTTATTTTGATAGACACTAAGCCCACTACGTCCATTGAAGGGAGATT 90 9507436 0.987277269 25 82 724 0.920863309 1.26211193 0.258992806 0.4 0.611510791 90 5 6 128 3L:9507354-9507484 6 39.5 2900 FBgn0036008 265.6766667 17.37666667 26.79 0.148676963 2.273163246 1.474430758 -1 0 -0.5 0.1 dme-miR-184-5p 6mer3-8 TGATAA 3L 9509930 9509935 - 3L_9509930_9509935_- 0.977778192 0.999798209 0.9887882 0.015570491 RpS9 FBtr0076424 9509888 9510460 3L - 9509888 9510030 stop_codon RpS9 FlyBase G35765.1 AGAAGAACCAGGGCGGTGGCGGTGGAGCTGCTGAAGAGGAGGAGGACTAAGCAGTGGTAGCCAGCTGTAGCCAAGACAAATACATGGCGCAGACTTGATAAAAATCCGTTTGCTTTACACAAATAAATGTAAAAATACACGAA 34 9509921 0.969701429 17 32 179 0.923076923 1.556302501 0.051282051 0.117647059 0.230769231 34 3 0 36 3L:9509888-9510030 6 RpS9 FBtr0076424 9509888 9510460 TGATAA 6mer3-8 dme-miR-184-5p 3L - 9509894 9510023 stop_codon RpS9 FlyBase G27050.1 CCAGGGCGGTGGCGGTGGAGCTGCTGAAGAGGAGGAGGACTAAGCAGTGGTAGCCAGCTGTAGCCAAGACAAATACATGGCGCAGACTTGATAAAAATCCGTTTGCTTTACACAAATAAATGTAAAAATA 32 9509935 0.943657492 14 30 126 0.906976744 1.591064607 0.255813953 0.28125 0.465116279 32 4 0 39 3L:9509894-9510023 6 13.5 2901 FBgn0010408 2997.456667 541.4933333 822.2533333 0.004503818 0.024931055 0.016418298 -14 0 -7 0.1 dme-miR-14-3p 7mer-A1 AGACTGA 3L 9596485 9596491 + 3L_9596485_9596491_+ 0.823349388 0.823349423 0.823349405 0 CG42673 FBtr0302711 9595238 9596713 3L + 9596463 9596513 3'utr CG42673 FlyBase G29216.1 AATTTATGCAAAACGATTTTTGAGACTGAAACTGAAATTTGTACTAAGCAT 59 9596483 0.771565812 4 59 355 1 1.819543936 0.348484848 0.101694915 0.196969697 59 0 0 66 3L:9596463-9596513 7 CG42673 FBtr0302711 9595238 9596713 AGACTGA 7mer-A1 dme-miR-14-3p 3L + 9596463 9596500 3'utr CG42673 FlyBase G22103.1 AATTTATGCAAAACGATTTTTGAGACTGAAACTGAAAT 69 9596483 0.712520464 4 68 417 0.989010989 1.954242509 0.395604396 0.289855072 0.461538462 69 1 0 90 3L:9596463-9596500 7 63.5 2902 FBgn0261555 60.33333333 2.016666667 3.083333333 1.052486188 31.48760331 20.59459459 2 2 2 0.1 dme-miR-79-3p 7mer-A1 AGCTTTA 3L 9623600 9623606 + 3L_9623600_9623606_+ 0.823349455 0.823349159 0.823349307 2.12E-07 LanB2 FBtr0076382|FBtr0345031 9623389|9623389 9623980|9623980 3L + 9623576 9623671 3'utr LanB2 FlyBase G29254.3 AAGGAGACCAACTGAGCAACGTTAAGCTTTAACGCATCATCGTTCGCCTACTGTATGCCATATACTATAATGATACAACGGATACAAGAGGATGGA 57 9623598 0.97239241 10 50 323 0.884057971 1.183269844 0.376811594 0.175438596 0.31884058 57 5 3 61 3L:9623576-9623671 7 LanB2 FBtr0345031|FBtr0076382 9623389|9623389 9623980|9623980 AGCTTTA 7mer-A1 dme-miR-79-3p 3L + 9623577 9623638 3'utr LanB2 FlyBase G22134.3 AGGAGACCAACTGAGCAACGTTAAGCTTTAACGCATCATCGTTCGCCTACTGTATGCCATAT 38 9623598 0.823802956 5 30 215 0.833333333 1.22184875 0.25 0.394736842 0.616666667 38 8 2 50 3L:9623577-9623638 7 38 2903 FBgn0267348 4568.76 93.89666667 143.73 0.008317355 0.404700202 0.26438461 2 2 2 0.1 dme-miR-305-3p 8mer-A1 ATGTGCCA 3L 9623890 9623897 + 3L_9623890_9623897_+ 0.60958506 0.611888641 0.610736851 0.00162882 LanB2 FBtr0076382|FBtr0345031 9623389|9623389 9623980|9623980 3L + 9623817 9623935 3'utr LanB2 FlyBase G29255.1 ATATCTCTACCGTAGCTCCACCTGAAGTCTATTCTAAACACTTATATATTAACATATTTGTCATCTACGTTTAATGTGCCAATACAATTACCATGTATCTTTGTGTATAAGTCGCTTAA 68 9623917 0.84241447 22 67 587 0.987654321 1.903089987 0.111111111 0.176470588 0.308641975 68 1 0 80 3L:9623817-9623935 8 LanB2 FBtr0345031|FBtr0076382 9623389|9623389 9623980|9623980 ATGTGCCA 8mer-A1 dme-miR-305-3p 3L + 9623862 9623932 3'utr LanB2 FlyBase G22138.1 ATATTAACATATTTGTCATCTACGTTTAATGTGCCAATACAATTACCATGTATCTTTGTGTATAAGTCGCT 13 9623917 0.98815038 7 12 118 0.95 1.278753601 0.1 0.384615385 0.6 13 1 0 19 3L:9623862-9623932 8 12.5 2904 FBgn0267348 4568.76 93.89666667 143.73 0.002735972 0.133125067 0.086968622 -27 -27 -27 0.1 dme-miR-1006-3p 7mer-A1 GAATTTA 3L 9680849 9680855 + 3L_9680849_9680855_+ 0.515574646 0.783896882 0.649735764 0.189732518 CG16717 FBtr0076392 9680809 9681060 3L + 9680846 9680872 3'utr CG16717 FlyBase G29266.1 AATGAATTTATTTTCGTCCCACTTTAT 14 9680857 0.689677962 3 13 139 0.947368421 1.255272505 0 0.214285714 0.421052632 14 1 0 18 3L:9680846-9680872 7 CG16717 FBtr0076392 9680809 9681060 GAATTTA 7mer-A1 dme-miR-1006-3p 3L + 9680818 9680870 3'utr CG16717 FlyBase G22146.1 AGATGATTATTTATTGTGTCACAGGTTCAATGAATTTATTTTCGTCCCACTTT 25 9680857 0.990818675 6 23 229 0.945945946 1.06694679 0 0.36 0.567567568 25 0 2 35 3L:9680818-9680870 7 18 2905 FBgn0036028 100.6666667 8.713333333 13.39666667 0.178807947 2.065799541 1.343617815 -8 -8 -8 0.1 dme-miR-33-5p 6mer3-8 CAATGC 3L 9716249 9716254 + 3L_9716249_9716254_+ 0.99908702 0.99670467 0.997895845 0.00168454 vsg FBtr0076399|FBtr0076400|FBtr0076398|FBtr0076401 9716221|9716221|9716221|9716221 9717716|9717716|9717716|9717716 3L + 9716196 9716339 stop_codon vsg FlyBase G29291.1 AACGAGCGCAACTACCACACCCTTTGAGCCGCCACCGCCTTTACGTCGGCCTTCAATGCGGCAGCCGGAGCTGCGGCGGCCAGCAGCAGTGCCGCATCCACGGATGCGGAGCGCGTGCGGTTTGTCCAGCCTTCGATACCGCTA 63 9716252 0.971479196 14 61 244 0.972972973 1.556302501 0.324324324 0.158730159 0.283783784 63 1 1 72 3L:9716196-9716339 6 vsg FBtr0076401|FBtr0076398|FBtr0076399|FBtr0076400 9716221|9716221|9716221|9716221 9717716|9717716|9717716|9717716 CAATGC 6mer3-8 dme-miR-33-5p 3L + 9716205 9716282 stop_codon vsg FlyBase G22165.1 AACTACCACACCCTTTGAGCCGCCACCGCCTTTACGTCGGCCTTCAATGCGGCAGCCGGAGCTGCGGCGGCCAGCAGC 19 9716252 0.980689344 5 19 61 1 1.414973348 0.423076923 0.315789474 0.5 19 0 0 26 3L:9716205-9716282 6 17.5 2906 FBgn0045823 8137.983333 435.5866667 668.4 0.00215041 0.040175702 0.026181927 -3 -3 -3 0.1 dme-miR-190-5p 6mer3-8 ACATAT 3L 9717101 9717106 + 3L_9717101_9717106_+ 0.993936543 0.990187648 0.992062096 0.002650873 vsg FBtr0076399|FBtr0076400|FBtr0330097|FBtr0076398|FBtr0076401 9716221|9716221|9716461|9716221|9716221 9717716|9717716|9717716|9717716|9717716 3L + 9717080 9717128 3'utr vsg FlyBase G29297.1 TTCATTCTAGGAACTAAGAATACATATGTACTACCTAAAACCGAGCTAA 217 9717106 0.727599804 4 213 1218 0.976744186 1.924279286 0.003875969 0.147465438 0.282945736 217 4 2 252 3L:9717080-9717128 6 vsg FBtr0076401|FBtr0330097|FBtr0076398|FBtr0076399|FBtr0076400 9716221|9716461|9716221|9716221|9716221 9717716|9717716|9717716|9717716|9717716 ACATAT 6mer3-8 dme-miR-190-5p 3L + 9717063 9717148 3'utr vsg FlyBase G22171.1 TGAATAACTAAAATCGATTCATTCTAGGAACTAAGAATACATATGTACTACCTAAAACCGAGCTAAACACAATGGGAAACGCGTTT 158 9717106 0.969962145 6 153 829 0.966244726 1.757775491 0.008438819 0.392405063 0.594936709 158 5 3 229 3L:9717063-9717148 6 184.5 2907 FBgn0045823 8137.983333 435.5866667 668.4 0.022671464 0.423566684 0.276032316 -5 -5 -5 0.1 dme-miR-190-5p 6mer3-8 ACATAT 3L 9717449 9717454 + 3L_9717449_9717454_+ 0.999999999 0.91164145 0.955820725 0.062478965 vsg FBtr0076399|FBtr0076400|FBtr0330097|FBtr0076398|FBtr0076401 9716221|9716221|9716461|9716221|9716221 9717716|9717716|9717716|9717716|9717716 3L + 9717405 9717519 3'utr vsg FlyBase G29300.1 CATACACGCAAATGTTGAATATTTTGTACTAGAATGGAAACTATACATATGAATTACGTTTACCTAACCATACCGCGCTTGCTGTTGGATTAATACACATTTGAAGCTACAAATC 25 9717459 0.983914724 13 22 178 0.9 1.431363764 0.1 0.16 0.3 25 3 0 27 3L:9717405-9717519 6 vsg FBtr0076401|FBtr0330097|FBtr0076398|FBtr0076399|FBtr0076400 9716221|9716461|9716221|9716221|9716221 9717716|9717716|9717716|9717716|9717716 ACATAT 6mer3-8 dme-miR-190-5p 3L + 9717428 9717493 3'utr vsg FlyBase G22172.1 TTGTACTAGAATGGAAACTATACATATGAATTACGTTTACCTAACCATACCGCGCTTGCTGTTGGA 9 9717459 0.984459869 6 7 56 0.615384615 0.903089987 0.076923077 0.333333333 0.538461538 9 5 0 8 3L:9717428-9717493 6 6 2908 FBgn0045823 8137.983333 435.5866667 668.4 0.000737283 0.013774526 0.008976661 -10 -10 -10 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 9721102 9721108 - 3L_9721102_9721108_- 0.786383811 0.746239351 0.766311581 0.028386377 nbs FBtr0306041|FBtr0306041|FBtr0306041 9720412|9720412|9720412 9722003|9722003|9722003 3L - 9721089 9721133 5'utr nbs FlyBase G35833.1 GCTAAACGAAAGCGACAGCGATGATTGTGATAATCTTTTTAACTT 40 9721110 0.982852556 2 36 276 0.934782609 1.33243846 0.152173913 0.153846154 0.282608696 39 2 1 43 3L:9721089-9721133 7 nbs FBtr0306041|FBtr0306041|FBtr0306041 9720412|9720412|9720412 9722003|9722003|9722003 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 9721084 9721129 5'utr nbs FlyBase G27102.1 AACGAAAGCGACAGCGATGATTGTGATAATCTTTTTAACTTTGCAG 33 9721109 0.984256654 6 29 231 0.914893617 1.633468456 0.191489362 0.393939394 0.574468085 33 4 0 43 3L:9721084-9721129 7 35.5 2909 FBgn0261530 423 19.85333333 30.51333333 0.08392435 1.788112827 1.163425825 2 1 1.5 0.1 dme-miR-932-5p 6mer3-8 GGAATT 3L 9729294 9729299 + 3L_9729294_9729299_+ 0.99997947 0.999975076 0.999977273 3.11E-06 Naa60 FBtr0089410|FBtr0089411 9728844|9728844 9729650|9729650 3L + 9729215 9729309 3'utr Naa60 FlyBase G29317.1 AAAAGATATCTATCTGTTCACTACTGCTGTAAATAGTCTTATGATGTTTTGTTTGAATCGAGCTGTAACCGAGTGATTTGGAATTAGCATAGCCC 27 9729292 0.755131322 8 25 202 0.96875 1.491361694 0.5 0.148148148 0.28125 27 1 0 31 3L:9729215-9729309 6 Naa60 FBtr0089411|FBtr0089410 9728844|9728844 9729650|9729650 GGAATT 6mer3-8 dme-miR-932-5p 3L + 9729265 9729302 3'utr Naa60 FlyBase G22185.1 GTTTGAATCGAGCTGTAACCGAGTGATTTGGAATTAGC 10 9729292 0.961810727 3 10 57 1 1.278753601 0.157894737 0.5 0.736842105 10 0 0 19 3L:9729265-9729302 6 12.5 2910 FBgn0036039 253.3733333 14.26 21.89 0.049334316 0.87657784 0.571037003 2 2 2 0.1 dme-miR-283-5p 6mer3-8 TGATAT 3L 9834583 9834588 - 3L_9834583_9834588_- 0.999726169 0.99978323 0.999754699 4.03E-05 I-2 FBtr0076370|FBtr0112935 9834365|9834365 9835007|9835007 3L - 9834531 9834650 3'utr I-2 FlyBase G35838.1 ATGCGTCTCAGCCGTAGCGTCCTGTATTGTTGCAAATGTAGTTAAACAAAAGTCTTTCAAATTGATATCGAGATGGAAAGCCAACCCGTTCGCAGCTCCGTTTGCATTTAATTTGATTGG 32 9834589 0.795298144 8 31 252 1 1.568201724 0.108108108 0.15625 0.27027027 32 0 0 37 3L:9834531-9834650 6 I-2 FBtr0076370|FBtr0112935 9834365|9834365 9835007|9835007 TGATAT 6mer3-8 dme-miR-283-5p 3L - 9834536 9834648 3'utr I-2 FlyBase G27108.1 GCGTCTCAGCCGTAGCGTCCTGTATTGTTGCAAATGTAGTTAAACAAAAGTCTTTCAAATTGATATCGAGATGGAAAGCCAACCCGTTCGCAGCTCCGTTTGCATTTAATTTG 20 9834589 0.980797384 7 20 152 1 1.397940009 0.2 0.2 0.36 20 0 0 25 3L:9834536-9834648 6 18 2911 FBgn0028429 476.1233333 37.47333333 57.58666667 0.037805331 0.480341576 0.312572355 1 1 1 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 3L 9839158 9839164 - 3L_9839158_9839164_- 0.782908329 0.782907663 0.782907996 4.24E-07 RasGAP1 FBtr0076368 9839091 9840561 3L - 9839145 9839187 3'utr RasGAP1 FlyBase G35847.1 CATGCCTAGCTGATAAGTTGTTGGTACAAAGAATCGAAAATAA 72 9839166 0.717684998 6 63 499 0.87804878 1.556302501 0.146341463 0.125 0.231707317 72 9 1 72 3L:9839145-9839187 7 RasGAP1 FBtr0076368 9839091 9840561 GTACAAA 7mer-A1 dme-miR-305-5p 3L - 9839096 9839189 3'utr RasGAP1 FlyBase G27116.1 ACCATGCCTAGCTGATAAGTTGTTGGTACAAAGAATCGAAAATAAAAACATAGATATTTTCCAAGGGAAAAATAAAGCGTATCGCCAATGGATA 85 9839166 0.980065407 8 79 551 0.952 1.598425707 0.192 0.364705882 0.568 85 4 2 119 3L:9839096-9839189 7 75.5 2912 FBgn0004390 1606.046667 35.75666667 55.00333333 0.047009842 2.11149436 1.372644082 2 2 2 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 3L 9839216 9839222 - 3L_9839216_9839222_- 0.620023454 0.620204265 0.620113859 0.000127845 RasGAP1 FBtr0076368 9839091 9840561 3L - 9839201 9839265 3'utr RasGAP1 FlyBase G35848.1 TGTTTGGAGTTTCCAACGTGGTTCATATACATATAATTTCACTTGCATTTTAAGGACACAATTAT 8 9839224 0.986844698 6 8 69 1 1 0.2 0.25 0.4 8 0 0 10 3L:9839201-9839265 7 RasGAP1 FBtr0076368 9839091 9840561 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 9839203 9839230 3'utr RasGAP1 FlyBase G27117.1 ATTTCACTTGCATTTTAAGGACACAATT 5 9839216 0.97312014 4 5 37 1 0.698970004 0 0 0 5 0 0 5 3L:9839203-9839230 7 4.5 2913 FBgn0004390 1606.046667 35.75666667 55.00333333 0.002801911 0.125850657 0.081813223 2 -6 -2 0.1 dme-miR-7-5p 7mer-m8 GTCTTCC 3L 9839410 9839416 - 3L_9839410_9839416_- 0.70595019 0.705950312 0.705950251 7.07E-08 RasGAP1 FBtr0076368 9839091 9840561 3L - 9839357 9839436 3'utr RasGAP1 FlyBase G35849.1 CATCAATCGCATTGAAAAGTGTCTTCCTTCGCCGCGTTCAATCATATTGCCTTTTGTTTATGCATTCCAATCCAATAATT 16 9839417 0.989993035 4 14 134 0.882352941 0.875061263 0.117647059 0.0625 0.117647059 16 1 1 15 3L:9839357-9839436 7 RasGAP1 FBtr0076368 9839091 9840561 GTCTTCC 7mer-m8 dme-miR-7-5p 3L - 9839397 9839432 3'utr RasGAP1 FlyBase G27118.1 AATCGCATTGAAAAGTGTCTTCCTTCGCCGCGTTCA 16 9839417 0.775990243 3 16 117 1 1.477121255 0.1 0.75 0.866666667 16 0 0 30 3L:9839397-9839432 7 14 2914 FBgn0004390 1606.046667 35.75666667 55.00333333 0.008717057 0.391535378 0.254530028 1 1 1 0.1 dme-miR-278-3p 7mer-A1 CCACCGA 3L 9839535 9839541 - 3L_9839535_9839541_- 0.82334912 0.823349295 0.823349207 1.41E-07 RasGAP1 FBtr0076368 9839091 9840561 3L - 9839500 9839565 3'utr RasGAP1 FlyBase G35850.1 GATTTGGTTAGCTTCGACTTACTTCCACCGATTTGTTTCCAAAGCTCTTCCATATTAATTACACAT 37 9839543 0.782668924 11 37 302 1 1.69019608 0.081632653 0.243243243 0.428571429 37 0 0 49 3L:9839500-9839565 7 RasGAP1 FBtr0076368 9839091 9840561 CCACCGA 7mer-A1 dme-miR-278-3p 3L - 9839510 9839560 3'utr RasGAP1 FlyBase G27119.1 GGTTAGCTTCGACTTACTTCCACCGATTTGTTTCCAAAGCTCTTCCATATT 17 9839543 0.98754403 4 16 144 0.925925926 1.397940009 0.037037037 0.470588235 0.666666667 17 2 0 25 3L:9839510-9839560 7 24.5 2915 FBgn0004390 1606.046667 35.75666667 55.00333333 0.015254849 0.685186912 0.44542755 2 2 2 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 3L 9840436 9840442 - 3L_9840436_9840442_- 0.782816032 0.782911821 0.782863927 6.77E-05 RasGAP1 FBtr0076367|FBtr0330168|FBtr0076368 9839684|9839684|9839091 9840561|9840507|9840561 3L - 9840408 9840470 3'utr RasGAP1 FlyBase G35853.1 CGCTCCTACGCAACCAGAGGATGCTGCTGTACAAAACGATTAATTGTGCTAATTTCTAGGCTC 60 9840449 0.880378288 9 55 290 0.942857143 1.342422681 0.2 0.15 0.271428571 60 2 2 66 3L:9840408-9840470 7 RasGAP1 FBtr0076368|FBtr0330168|FBtr0076367 9839091|9839684|9839684 9840561|9840507|9840561 GTACAAA 7mer-A1 dme-miR-305-5p 3L - 9840405 9840469 3'utr RasGAP1 FlyBase G27122.1 GCTCCTACGCAACCAGAGGATGCTGCTGTACAAAACGATTAATTGTGCTAATTTCTAGGCTCTTG 37 9840447 0.767307546 6 35 154 0.966101695 1.278753601 0.254237288 0.324324324 0.576271186 37 0 2 57 3L:9840405-9840469 7 42 2916 FBgn0004390 1606.046667 35.75666667 55.00333333 0.02615117 1.174606134 0.763590085 7 5 6 0.1 dme-miR-252-5p 6mer3-8 GTACTT 3L 9860626 9860631 - 3L_9860626_9860631_- 1 0.99998619 0.999993095 9.76E-06 iPLA2-VIA FBtr0076363|FBtr0076362|FBtr0076364|FBtr0076365 9860215|9860215|9860215|9860215 9860704|9860704|9860704|9860704 3L - 9860593 9860688 3'utr iPLA2-VIA FlyBase G35881.1 AGACCGCATTTGCTGTAGAGATCTCTCATTCGAGGGATCCTTTCGATTCATGTCCGTGTACTTTAGACTCGTTTAACCCTCTTCGTTTTTATTAAG 35 9860627 0.746402216 12 33 318 0.95 1.579783597 0.35 0.114285714 0.225 35 2 0 38 3L:9860593-9860688 6 iPLA2-VIA FBtr0076365|FBtr0076364|FBtr0076362|FBtr0076363 9860215|9860215|9860215|9860215 9860704|9860704|9860704|9860704 GTACTT 6mer3-8 dme-miR-252-5p 3L - 9860606 9860688 3'utr iPLA2-VIA FlyBase G27145.1 AGACCGCATTTGCTGTAGAGATCTCTCATTCGAGGGATCCTTTCGATTCATGTCCGTGTACTTTAGACTCGTTTAACCCTCTT 27 9860626 0.764961691 11 26 239 0.975 1.290034611 0.125 0.296296296 0.525 27 0 1 39 3L:9860606-9860688 6 20.5 2917 FBgn0036053 1579.763333 56.89333333 87.11666667 0.012976627 0.360323412 0.235316625 -4 -5 -4.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 3L 9892397 9892402 + 3L_9892397_9892402_+ 0.985616799 0.996849792 0.991233296 0.00794293 CalpB FBtr0076343|FBtr0304675 9892344|9892344 9893319|9893011 3L + 9892355 9892415 3'utr CalpB FlyBase G29359.1 AATTGCTACTAATCTAATCCTAAGTGCGACGTATACTTAATCTACCTGTGCATCATATTAT 90 9892403 0.911279172 10 87 716 0.973684211 2.045322979 0.00877193 0.211111111 0.377192982 90 3 0 111 3L:9892355-9892415 6 CalpB FBtr0304675|FBtr0076343 9892344|9892344 9893011|9893319 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 3L + 9892373 9892424 3'utr CalpB FlyBase G22210.1 CCTAAGTGCGACGTATACTTAATCTACCTGTGCATCATATTATTCATGCATT 44 9892403 0.851781486 8 43 353 0.985915493 1.84509804 0.014084507 0.477272727 0.676056338 44 1 0 70 3L:9892373-9892424 6 64.5 2918 FBgn0025866 591.89 16.56333333 25.20333333 0.108972951 3.894143691 2.559185293 -6 -6 -6 0.1 dme-miR-282-5p 7mer-m8 AGAGGCT 3L 9893175 9893181 + 3L_9893175_9893181_+ 0.631524569 0.631524569 0.631524569 0 CalpB FBtr0076343 9892344 9893319 3L + 9893160 9893188 3'utr CalpB FlyBase G29363.1 TAACCAATCGGGTTTAGAGGCTCTTTTTG 5 9893174 0.641428468 3 4 43 0.888888889 0.903089987 0.222222222 0.6 0.777777778 5 1 0 8 3L:9893160-9893188 7 CalpB FBtr0076343 9892344 9893319 AGAGGCT 7mer-m8 dme-miR-282-5p 3L + 9893154 9893188 3'utr CalpB FlyBase G22213.1 TGAAATTAACCAATCGGGTTTAGAGGCTCTTTTTG 8 9893174 0.980765952 4 8 64 1 1 0.6 0.125 0.3 8 0 0 10 3L:9893154-9893188 7 6 2919 FBgn0025866 591.89 16.56333333 25.20333333 0.010137019 0.362245925 0.238063748 1 1 1 0.1 dme-miR-283-5p 8mer-A1 TGATATTA 3L 9895667 9895674 - 3L_9895667_9895674_- 0.592192292 0.592192239 0.592192265 7.07E-08 CG6707 FBtr0076356|FBtr0076358|FBtr0076357 9894805|9894805|9894805 9895759|9895759|9895759 3L - 9895656 9895736 3'utr CG6707 FlyBase G35913.1 AAGGAAGAAAGTGCATTGTTTTATTTTTATATATATATATTATTCATATATATCATTCCTTTTGATATTAAATTTAAAACT 17 9895675 0.963762983 10 16 186 0.95 1.278753601 0.1 0.176470588 0.3 17 1 0 19 3L:9895656-9895736 8 CG6707 FBtr0076357|FBtr0076356|FBtr0076358 9894805|9894805|9894805 9895759|9895759|9895759 TGATATTA 8mer-A1 dme-miR-283-5p 3L - 9895658 9895691 3'utr CG6707 FlyBase G27171.1 ATATATATCATTCCTTTTGATATTAAATTTAAAA 5 9895676 0.918878124 3 5 56 1 0.84509804 0 0.4 0.571428571 5 0 0 7 3L:9895658-9895691 8 7.5 2920 FBgn0036058 1005.72 59.74 91.51 0.007457344 0.125544024 0.081958256 1 2 1.5 0.1 dme-miR-283-5p 7mer-A1 GATATTA 3L 9902465 9902471 + 3L_9902465_9902471_+ 0.782911824 0.782911824 0.782911824 0 nudE FBtr0345694|FBtr0076344|FBtr0113158|FBtr0345695 9902278|9902337|9902278|9902278 9902965|9902965|9902965|9903031 3L + 9902430 9902531 3'utr nudE FlyBase G29378.1 ATTTGAACTAAAATGACTTTGTATAAACCACTTGCGATATTATGAATTACACAACAGTTGATGTTGTTGTTTCGAGCCCAACATATATAACATGCCTTAGTA 108 9902461 0.98142893 16 106 772 0.985185185 1.822821645 0.081481481 0.231481481 0.385185185 108 1 1 133 3L:9902430-9902531 7 nudE FBtr0345694|FBtr0076344|FBtr0113158|FBtr0345695 9902278|9902337|9902278|9902278 9902965|9902965|9902965|9903031 GATATTA 7mer-A1 dme-miR-283-5p 3L + 9902400 9902481 3'utr nudE FlyBase G22228.1 ATTAATTAAGTTTCTGCTGCCTCTTTATTTATTTGAACTAAAATGACTTTGTATAAACCACTTGCGATATTATGAATTACAC 87 9902449 0.831453804 11 86 641 0.992125984 1.799340549 0.007874016 0.344827586 0.551181102 87 0 1 126 3L:9902400-9902481 7 46.5 2921 FBgn0036059 1404.16 85.35333333 130.67 0.033115884 0.544794189 0.355858269 4 16 10 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 9970951 9970957 + 3L_9970951_9970957_+ 0.753482643 0.753898617 0.75369063 0.000294156 Dronc FBtr0076347|FBtr0076347|FBtr0076347 9970748|9970748|9970748 9971002|9971002|9971002 3L + 9970935 9970974 3'utr Dronc FlyBase G29394.1 GAAATTATGTAATTTATGTGATAACTGCCAGAAATCTACA 35 9970948 0.642870553 6 31 267 0.87804878 1.255272505 0.414634146 0.142857143 0.268292683 35 4 1 36 3L:9970935-9970974 7 Dronc FBtr0076347|FBtr0076347|FBtr0076347 9970748|9970748|9970748 9971002|9971002|9971002 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 9970928 9970971 3'utr Dronc FlyBase G22243.1 AAGGTACGAAATTATGTAATTTATGTGATAACTGCCAGAAATCT 22 9970948 0.899930366 5 21 183 0.962962963 1.414973348 0.333333333 0.227272727 0.37037037 22 1 0 26 3L:9970928-9970971 7 28.5 2922 FBgn0026404 332.5566667 20.05666667 30.72333333 0.08569968 1.420973907 0.92763372 3 3 3 0.1 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3L 997693 997698 - 3L_997693_997698_- 0.999939874 0.831846462 0.915893168 0.118859983 trio FBtr0072646|FBtr0072645|FBtr0072649|FBtr0072648|FBtr0072647|FBtr0072644 995980|995980|997208|995980|995980|995980 998084|998084|998084|998084|998084|998084 3L - 997673 997751 3'utr trio FlyBase G33172.2 CTATTCCGGATTTGTGTGTATGAAACGCAAAGTATTATATGCTCAAGATTACCTTTGACATTGTGTGCATTTTTAACTT 187 997696 0.779123676 16 180 1367 0.988764045 2.120573931 0.04494382 0.315508021 0.520599251 187 2 1 264 3L:997673-997751 6 trio FBtr0072647|FBtr0072644|FBtr0072646|FBtr0072645|FBtr0072649|FBtr0072648 995980|995980|995980|995980|997208|995980 998084|998084|998084|998084|998084|998084 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3L - 997673 997758 3'utr trio FlyBase G25101.1 TTGTTTTCTATTCCGGATTTGTGTGTATGAAACGCAAAGTATTATATGCTCAAGATTACCTTTGACATTGTGTGCATTTTTAACTT 113 997696 0.80283772 15 109 834 0.966292135 1.457377197 0.04494382 0.451327434 0.651685393 113 1 5 172 3L:997673-997758 6 128 2923 FBgn0024277 3958.67 117.21 180.3966667 0.032334092 1.092056992 0.709547479 -2 -2 -2 0.1 dme-miR-184-3p 6mer3-8 TCCGTC 3L 997929 997934 - 3L_997929_997934_- 0.999997424 0.999996891 0.999997157 3.54E-07 trio FBtr0072646|FBtr0072645|FBtr0072649|FBtr0072648|FBtr0072647|FBtr0072644 995980|995980|997208|995980|995980|995980 998084|998084|998084|998084|998084|998084 3L - 997891 997959 3'utr trio FlyBase G33174.1 TGAGCATTAGCCTCGCACTTGTTTTTCCGTCTGTGCGTTTGTTTACGGATAGTTTTGCTCACTCACACC 79 997935 0.77147714 7 76 972 0.965517241 1.924279286 0.057471264 0.088607595 0.172413793 79 3 0 84 3L:997891-997959 6 trio FBtr0072647|FBtr0072644|FBtr0072646|FBtr0072645|FBtr0072649|FBtr0072648 995980|995980|995980|995980|997208|995980 998084|998084|998084|998084|998084|998084 TCCGTC 6mer3-8 dme-miR-184-3p 3L - 997837 997961 3'utr trio FlyBase G25102.1 AGTGAGCATTAGCCTCGCACTTGTTTTTCCGTCTGTGCGTTTGTTTACGGATAGTTTTGCTCACTCACACCCAGAAACACTCGCATACTCAATCCTAATTTGTATGTAACTTGTAATTGTAATTT 65 997935 0.987691095 10 64 769 0.97 1.986771734 0.09 0.369230769 0.59 65 3 0 97 3L:997837-997961 6 64.5 2924 FBgn0024277 3958.67 117.21 180.3966667 0.016293351 0.550294343 0.357545409 1 1 1 0.1 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 10002284 10002289 - 3R_10002284_10002289_- 0.855058982 0.849712113 0.852385548 0.003780829 Mical FBtr0347211|FBtr0082207|FBtr0347214|FBtr0347212|FBtr0082213|FBtr0082212|FBtr0082208|FBtr0082209|FBtr0306608|FBtr0347213|FBtr0082210|FBtr0306609 10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552 10009621|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434 3R - 10002262 10002302 3'utr Mical FlyBase G49745.1 ACTAAAACCCGTGAGCTGTAACCGAAACGAGCAACTAACTA 22 10002291 0.895274207 3 22 58 1 1.477121255 0 0.272727273 0.466666667 22 0 0 30 3R:10002262-10002302 6 Mical FBtr0306609|FBtr0306608|FBtr0347213|FBtr0082210|FBtr0082209|FBtr0082208|FBtr0082212|FBtr0082213|FBtr0347212|FBtr0347214|FBtr0082207|FBtr0347211 10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552 10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10009621 AGCTGT 6mer3-8 dme-miR-1008-3p 3R - 10002269 10002356 3'utr Mical FlyBase G37603.1 AGGGAACAGGGGAGAGCGTACCAAAAAGGCAGCTGAATATACAGAATTAACAATACTAAAACCCGTGAGCTGTAACCGAAACGAGCAA 29 10002291 0.900392162 6 27 72 0.953488372 1.612783857 0.162790698 0.413793103 0.604651163 29 2 0 41 3R:10002269-10002356 6 19.5 2925 FBgn0053208 877.6666667 10.30333333 15.81666667 0.022218002 1.892591394 1.232876712 2 2 2 0.1 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3R 10002392 10002397 - 3R_10002392_10002397_- 0.999983734 0.7214871 0.860735417 0.196926834 Mical FBtr0347211|FBtr0082207|FBtr0347214|FBtr0347212|FBtr0082213|FBtr0082212|FBtr0082208|FBtr0082209|FBtr0306608|FBtr0347213|FBtr0082210|FBtr0306609 10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552 10009621|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434 3R - 10002361 10002410 3'utr Mical FlyBase G49747.1 CTGGTCTGCGAAGTGGTGCATGGACTGTTGAGCCTAAATACTTAAGATGA 18 10002390 0.977454485 5 17 117 0.913043478 1.322219295 0.304347826 0.222222222 0.391304348 18 2 0 21 3R:10002361-10002410 6 Mical FBtr0306609|FBtr0306608|FBtr0347213|FBtr0082210|FBtr0082209|FBtr0082208|FBtr0082212|FBtr0082213|FBtr0347212|FBtr0347214|FBtr0082207|FBtr0347211 10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552 10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10009621 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3R - 10002369 10002418 3'utr Mical FlyBase G37604.1 GGAGATTGCTGGTCTGCGAAGTGGTGCATGGACTGTTGAGCCTAAATACT 17 10002383 0.672871845 7 16 98 1 1.361727836 0.47826087 0.352941176 0.52173913 17 0 0 23 3R:10002369-10002418 6 16.5 2926 FBgn0053208 877.6666667 10.30333333 15.81666667 0.018799848 1.601423488 1.043203372 -7 -14 -10.5 0.1 dme-bantam-3p 6mer2-7 GATCTC 3R 10005141 10005146 - 3R_10005141_10005146_- 0.663720853 0.671243815 0.667482334 0.005319494 Mical FBtr0347211 10001552 10009621 3R - 10005099 10005195 5'utr Mical FlyBase G49752.1 GAGGAAAAGATGCAGCTAATACGTTCAAGATTGCACTACGACCAAAACAGATCTCTGAAGCCGAAGCAACTGGAGGAGATGCCATCCGGGGATCTGG 29 10005140 0.92103967 5 28 73 0.96969697 1.505149978 0.212121212 0.137931034 0.242424242 29 1 0 32 3R:10005099-10005195 6 Mical FBtr0347211 10001552 10009621 GATCTC 6mer2-7 dme-bantam-3p 3R - 10005104 10005189 5'utr Mical FlyBase G37608.1 AAGATGCAGCTAATACGTTCAAGATTGCACTACGACCAAAACAGATCTCTGAAGCCGAAGCAACTGGAGGAGATGCCATCCGGGGA 20 10005140 0.947355953 5 17 71 0.857142857 1.176091259 0.114285714 0.6 0.771428571 20 4 1 30 3R:10005104-10005189 6 18.5 2927 FBgn0053208 877.6666667 10.30333333 15.81666667 0.021078618 1.795535425 1.169652266 -6 -6 -6 0.1 dme-bantam-3p 7mer-m8 TGATCTC 3R 10005448 10005454 - 3R_10005448_10005454_- 0.659505874 0.661383542 0.660444708 0.001327664 Mical FBtr0347211 10001552 10009621 3R - 10005381 10005472 5'utr Mical FlyBase G49753.1 AGCGCCCACACGTAGTGCTGATCTCTATAAGCCGCGCCCCTTCAGCGAACACATCGATTCGAACGCTCTGGCGGGTTACAAGCTCGGCAAGA 25 10005446 0.983459107 5 19 148 0.807692308 0.84509804 0.230769231 0.04 0.076923077 25 3 2 21 3R:10005381-10005472 7 Mical FBtr0347211 10001552 10009621 TGATCTC 7mer-m8 dme-bantam-3p 3R - 10005398 10005463 5'utr Mical FlyBase G37609.1 ACGTAGTGCTGATCTCTATAAGCCGCGCCCCTTCAGCGAACACATCGATTCGAACGCTCTGGCGGG 9 10005447 0.964918724 5 9 48 1 1.146128036 0.142857143 0.222222222 0.5 9 0 0 14 3R:10005398-10005463 7 13.5 2928 FBgn0053208 877.6666667 10.30333333 15.81666667 0.015381694 1.310255581 0.853530032 -8 -7 -7.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3R 10005744 10005750 - 3R_10005744_10005750_- 0.823348534 0.792639913 0.807994224 0.021714259 Mical FBtr0347211 10001552 10009621 3R - 10005727 10005803 5'utr Mical FlyBase G49754.1 AGCTGGAAGAGATAACCAAAGAACGCACTAAGCAAAAGGATCTGATTCACGACCTAGTCATGGACAAGTTGCAGTCG 15 10005743 0.93936454 4 14 58 0.941176471 1.204119983 0.235294118 0.133333333 0.235294118 15 1 0 16 3R:10005727-10005803 7 Mical FBtr0347211 10001552 10009621 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R - 10005732 10005773 5'utr Mical FlyBase G37610.1 AGCAAAAGGATCTGATTCACGACCTAGTCATGGACAAGTTGC 5 10005743 0.979165846 2 5 24 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 3R:10005732-10005773 7 7.5 2929 FBgn0053208 877.6666667 10.30333333 15.81666667 0.008545385 0.727919767 0.474183351 -7 -7 -7 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 10047344 10047350 - 3R_10047344_10047350_- 0.653067189 0.661614595 0.657340892 0.006043925 CG12811 FBtr0082204 10047250 10047380 3R - 10047320 10047374 3'utr CG12811 FlyBase G49764.1 TTAACATTATGTGCTTAAATGTATTGTGTTCTGTTTGGTAATGTGTGGAGGCCAG 13 10047351 0.949943185 4 13 154 1 1.146128036 0.428571429 0.076923077 0.142857143 13 0 0 14 3R:10047320-10047374 7 CG12811 FBtr0082204 10047250 10047380 TGTGTTC 7mer-m8 dme-miR-317-3p 3R - 10047308 10047373 3'utr CG12811 FlyBase G37619.1 TAACATTATGTGCTTAAATGTATTGTGTTCTGTTTGGTAATGTGTGGAGGCCAGTGAAGAATAGCG 10 10047351 0.991319331 4 10 102 1 1.079181246 0.5 0.2 0.333333333 10 0 0 12 3R:10047308-10047373 7 8.5 2930 FBgn0037779 320.7766667 40.53 62.69666667 0.026498187 0.209721194 0.135573396 1 1 1 0.1 dme-miR-283-5p 8mer-m1 TGATATTT 3R 10051478 10051485 + 3R_10051478_10051485_+ 0.55559384 0.555593839 0.55559384 0 CG3925 FBtr0082174 10051320 10051527 3R + 10051414 10051502 3'utr CG3925 FlyBase G41687.1 ATTCGTTTCACAACTACTTTTAGCAAAAACACACGGCGTTTGATGGCGTGGATGTAAACCTAATTGATATTTACGATTATTTGAATAAT 22 10051477 0.984328457 11 20 163 0.92 0.884606581 0.32 0.136363636 0.24 22 0 2 23 3R:10051414-10051502 8 CG3925 FBtr0082174 10051320 10051527 TGATATTT 8mer-m1 dme-miR-283-5p 3R + 10051413 10051489 3'utr CG3925 FlyBase G31461.1 AATTCGTTTCACAACTACTTTTAGCAAAAACACACGGCGTTTGATGGCGTGGATGTAAACCTAATTGATATTTACGA 16 10051477 0.982135605 8 15 114 0.961538462 1.397940009 0.230769231 0.4375 0.653846154 16 1 0 25 3R:10051413-10051489 8 9.5 2931 FBgn0037780 153.6666667 8.94 13.53666667 0.061822126 1.062639821 0.701797587 1 1 1 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 10073728 10073733 + 3R_10073728_10073733_+ 0.954012963 0.936002994 0.945007978 0.012734993 nerfin-2 FBtr0082177 10073452 10073761 3R + 10073668 10073749 stop_codon nerfin-2 FlyBase G41691.1 AGTCCGGCGGAAATGTTATCATGTGACTTAACAACTATTAGCAGCATTGAATCAACGATCTCTAGTTAAAGTTTAATAAATC 73 10073731 0.91463315 12 70 522 0.965909091 1.929418926 0.056818182 0.150684932 0.295454545 73 3 0 85 3R:10073668-10073749 6 nerfin-2 FBtr0082177 10073452 10073761 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 10073662 10073744 stop_codon nerfin-2 FlyBase G31463.1 CTGCAGAGTCCGGCGGAAATGTTATCATGTGACTTAACAACTATTAGCAGCATTGAATCAACGATCTCTAGTTAAAGTTTAAT 49 10073730 0.981557683 12 47 346 0.970149254 1.511883361 0.044776119 0.265306122 0.462686567 49 1 1 65 3R:10073662-10073744 6 36 2932 FBgn0041105 0.666666667 0.036666667 0.056666667 54 981.8181818 635.2941176 -3 -2 -2.5 0.1 dme-miR-305-3p 6mer3-8 ATGTGC 3R 10101533 10101538 - 3R_10101533_10101538_- 0.999825884 0.999966168 0.999896026 9.92E-05 Fmr1 FBtr0082200|FBtr0082198|FBtr0308123 10101418|10101418|10101418 10103231|10103231|10103231 3R - 10101487 10101562 3'utr Fmr1 FlyBase G49770.1 AATAATATAAATATAATGAGAAAAATGTGCGATTTAAATTTATTATTTATATAAAGATGAACTTATAAAGAATAGA 26 10101537 0.981745345 4 26 190 1 1.462397998 0.655172414 0.115384615 0.206896552 26 0 0 29 3R:10101487-10101562 6 Fmr1 FBtr0308123|FBtr0082200|FBtr0082198 10101418|10101418|10101418 10103231|10103231|10103231 ATGTGC 6mer3-8 dme-miR-305-3p 3R - 10101510 10101547 3'utr Fmr1 FlyBase G37623.1 ATGAGAAAAATGTGCGATTTAAATTTATTATTTATATA 26 10101537 0.932913922 3 26 171 1 1.579783597 0.736842105 0.346153846 0.552631579 26 0 0 38 3R:10101510-10101547 6 25 2933 FBgn0028734 4744.61 148.7233333 229.5766667 0.005269137 0.168097362 0.108896084 -1 -1 -1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 3R 10119215 10119222 + 3R_10119215_10119222_+ 0.643507222 0.643324606 0.643415914 0.000129118 CG3940 FBtr0344391|FBtr0082179|FBtr0344392 10119168|10119168|10119168 10119424|10119424|10120081 3R + 10119169 10119257 3'utr CG3940 FlyBase G41707.1 GATTTGAGATGGACAACTTGAAGGGAGCAGCCAATGACATACTCGTACCAAAGAATCGTTTAAGACAACGAATTTGTTTACCAACTATT 157 10119214 0.896310599 13 153 718 0.978609626 1.961421094 0.28342246 0.146496815 0.28342246 157 3 1 183 3R:10119169-10119257 8 CG3940 FBtr0082179|FBtr0344392|FBtr0344391 10119168|10119168|10119168 10119424|10120081|10119424 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 10119187 10119275 3'utr CG3940 FlyBase G31474.1 TGAAGGGAGCAGCCAATGACATACTCGTACCAAAGAATCGTTTAAGACAACGAATTTGTTTACCAACTATTTTAACAATTTAACAAAAA 64 10119214 0.976016478 7 60 282 0.956521739 1.643452676 0.097826087 0.328125 0.532608696 64 3 1 88 3R:10119187-10119275 8 99.5 2934 FBgn0037788 7.956666667 0.546666667 0.833333333 12.5052367 182.0121951 119.4 1 1 1 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3R 10119358 10119364 + 3R_10119358_10119364_+ 0.823346463 0.823001823 0.823174143 0.00024374 CG3940 FBtr0344391|FBtr0082179|FBtr0344392 10119168|10119168|10119168 10119424|10119424|10120081 3R + 10119282 10119387 3'utr CG3940 FlyBase G41708.1 GGAGACACAGGAGAGCAACGTCAGACCAGACAATTTATACTCATTAATTGTAATGCAGAACAGAACAAGAATTCAGCTAGTCAGTTTGTGTAAAGTTCATTAAGTG 141 10119354 0.982351544 14 122 913 0.865853659 1.67516709 0.18902439 0.14893617 0.268292683 141 20 2 142 3R:10119282-10119387 7 CG3940 FBtr0082179|FBtr0344392|FBtr0344391 10119168|10119168|10119168 10119424|10120081|10119424 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 10119278 10119379 3'utr CG3940 FlyBase G31474.2 AAACGGAGACACAGGAGAGCAACGTCAGACCAGACAATTTATACTCATTAATTGTAATGCAGAACAGAACAAGAATTCAGCTAGTCAGTTTGTGTAAAGTTC 86 10119354 0.976016478 12 71 552 0.868217054 1.447158031 0.209302326 0.360465116 0.573643411 86 14 3 112 3R:10119278-10119379 7 87.5 2935 FBgn0037788 7.956666667 0.546666667 0.833333333 10.99706745 160.0609756 105 4 4 4 0.1 dme-miR-190-5p 6mer3-8 ACATAT 3R 10127562 10127567 - 3R_10127562_10127567_- 0.998528986 0.999624208 0.999076597 0.000774423 tws FBtr0082187|FBtr0082190|FBtr0345177|FBtr0082188|FBtr0082189 10126127|10126127|10126127|10127125|10126803 10128146|10128146|10128146|10128146|10128146 3R - 10127524 10127608 3'utr tws FlyBase G49797.1 TTTTCTGTTCGCTTGTTAAGTTTACGATGAAAAGTCAAGAAACATATGCGCCCTGTTTGCTCTACTTTATAAATATAGACTAAAC 19 10127562 0.978667445 7 18 128 0.954545455 1.322219295 0.090909091 0.157894737 0.272727273 19 1 0 21 3R:10127524-10127608 6 tws FBtr0082189|FBtr0345177|FBtr0082188|FBtr0082187|FBtr0082190 10126803|10126127|10127125|10126127|10126127 10128146|10128146|10128146|10128146|10128146 ACATAT 6mer3-8 dme-miR-190-5p 3R - 10127540 10127572 3'utr tws FlyBase G37647.1 AAGAAACATATGCGCCCTGTTTGCTCTACTTTA 9 10127562 0.791565645 4 9 59 1 0.954242509 0.111111111 0 0 9 0 0 9 3R:10127540-10127572 6 10.5 2936 FBgn0004889 1118.713333 47.59666667 73.08666667 0.009385782 0.220603684 0.143665055 -5 -5 -5 0.1 dme-miR-970-3p 7mer-m8 TCTTATG 3R 10128050 10128056 - 3R_10128050_10128056_- 0.658998187 0.658998968 0.658998578 5.66E-07 tws FBtr0082187|FBtr0082190|FBtr0082192|FBtr0082191|FBtr0082193|FBtr0345177|FBtr0082188|FBtr0082189|FBtr0082186 10126127|10126127|10127649|10127642|10127642|10126127|10127125|10126803|10127642 10128146|10128146|10128146|10128146|10128146|10128146|10128146|10128146|10128146 3R - 10128028 10128211 stop_codon tws FlyBase G49802.1 CCGAAGAAAATATCATCGCCGTGGCTGCGACCAATAACCTCTTCATATTTCAGGATAAATTTTAGCCAACACTCCTCACAAGAACCACACCATACGCCACAATCACACAAGCAACTATATCTACAGAAACACCAAGAAGTACGATCACGCCTCATTCTTATGTTAAATTAATCGGTTTGCTTCA 41 10128057 0.980352169 12 39 282 0.955555556 1.633468456 0.111111111 0.097560976 0.177777778 41 2 0 43 3R:10128028-10128211 7 tws FBtr0082189|FBtr0082186|FBtr0345177|FBtr0082188|FBtr0082191|FBtr0082193|FBtr0082187|FBtr0082190|FBtr0082192 10126803|10127642|10126127|10127125|10127642|10127642|10126127|10126127|10127649 10128146|10128146|10128146|10128146|10128146|10128146|10128146|10128146|10128146 TCTTATG 7mer-m8 dme-miR-970-3p 3R - 10128035 10128075 3'utr tws FlyBase G37651.1 AAGTACGATCACGCCTCATTCTTATGTTAAATTAATCGGTT 20 10128057 0.743410919 6 19 177 0.961538462 1.397940009 0.153846154 0.25 0.423076923 20 1 0 25 3R:10128035-10128075 7 21 2937 FBgn0004889 1118.713333 47.59666667 73.08666667 0.018771565 0.441207367 0.28733011 1 1 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3R 10158850 10158855 + 3R_10158850_10158855_+ 0.999999884 1 0.999999942 7.07E-08 Invadolysin FBtr0082181 10158308 10159134 3R + 10158783 10158861 3'utr Invadolysin FlyBase G41714.1 AGCCAATCATTTTCGGGTGGATCATCCAAAGGCAGTTCTATGCTTCTTGAATATCGATCTGTACATTCCAAAGCCTATT 14 10158846 0.967226416 8 14 90 1 1.204119983 0.1875 0.142857143 0.25 14 0 0 16 3R:10158783-10158861 6 Invadolysin FBtr0082181 10158308 10159134 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 10158812 10158859 3'utr Invadolysin FlyBase G31480.1 AGGCAGTTCTATGCTTCTTGAATATCGATCTGTACATTCCAAAGCCTA 5 10158847 0.982929752 4 5 38 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:10158812-10158859 6 5 2938 FBgn0086359 69.66666667 2.306666667 3.503333333 0.071770335 2.167630058 1.427212179 4 3 3.5 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3R 10158971 10158977 + 3R_10158971_10158977_+ 0.51324717 0.520939083 0.517093126 0.005438995 Invadolysin FBtr0082181 10158308 10159134 3R + 10158941 10158994 3'utr Invadolysin FlyBase G41716.1 AATATGGTTTTCGAAATTTGTTGATTGCCTTGTGATTTATGTATTCTATTAATT 70 10158977 0.745051529 8 70 777 1 1.924279286 0.333333333 0.157142857 0.297619048 70 0 0 84 3R:10158941-10158994 7 Invadolysin FBtr0082181 10158308 10159134 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 10158958 10158996 3'utr Invadolysin FlyBase G31482.1 TTGTTGATTGCCTTGTGATTTATGTATTCTATTAATTTT 60 10158977 0.724593462 7 59 673 0.989690722 1.982271233 0.268041237 0.383333333 0.618556701 60 1 0 96 3R:10158958-10158996 7 64.5 2939 FBgn0086359 69.66666667 2.306666667 3.503333333 0.925837321 27.96242775 18.41103711 -6 -6 -6 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 10161794 10161799 - 3R_10161794_10161799_- 0.954418971 0.799583793 0.877001382 0.10948502 Best1 FBtr0114590 10161462 10161984 3R - 10161768 10161911 3'utr Best1 FlyBase G49834.2 AAGCTAAATTACCTATACTATATTCTAGACGTATATGCCGCTGACATATACTGGACATACGCAAATTAACGGACAGTTTAAGAATGCTCATAATGTCTAAAACGAGCTCGAGTGATGATGGACCTAATTAACGCAGTTAATAAC 118 10161793 0.836963465 15 113 596 0.965986395 1.67516709 0.401360544 0.211864407 0.367346939 118 3 2 142 3R:10161768-10161911 6 Best1 FBtr0082183|FBtr0337020|FBtr0114590|FBtr0306023 10161702|10161702|10161462|10161702 10161984|10161984|10161984|10161984 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R - 10161767 10161838 3'utr Best1 FlyBase G37674.1 CAGTTTAAGAATGCTCATAATGTCTAAAACGAGCTCGAGTGATGATGGACCTAATTAACGCAGTTAATAACA 112 10161793 0.846586468 8 112 536 1 2.23299611 0.380116959 0.419642857 0.619883041 112 0 0 171 3R:10161767-10161838 6 103.5 2940 FBgn0040238 1105.333333 45.14 68.90666667 0.093636912 2.292866637 1.502031734 -6 -6 -6 0.1 dme-miR-305-5p 8mer-m1 AGTACAAT 3R 10302596 10302603 + 3R_10302596_10302603_+ 0.558339029 0.553291695 0.555815362 0.00356898 CG43143 FBtr0305356|FBtr0337049 10302298|10302298 10302898|10302898 3R + 10302566 10302638 3'utr CG43143 FlyBase G41728.1 AAGGCAGCAGTAGCGCAACCACATTCCCTCAGTACAATGAATATTGTATTATTGTGATTTTGATTTTAAAATT 65 10302589 0.918488346 6 63 438 0.973333333 1.86332286 0.186666667 0.138461538 0.253333333 65 2 0 73 3R:10302566-10302638 8 CG43143 FBtr0337049|FBtr0305356 10302298|10302298 10302898|10302898 AGTACAAT 8mer-m1 dme-miR-305-5p 3R + 10302574 10302638 3'utr CG43143 FlyBase G31490.1 AGTAGCGCAACCACATTCCCTCAGTACAATGAATATTGTATTATTGTGATTTTGATTTTAAAATT 49 10302589 0.93364133 6 47 387 0.970588235 1.51851394 0.161764706 0.265306122 0.470588235 49 1 1 66 3R:10302574-10302638 8 39 2941 FBgn0262617 452.3433333 9.223333333 14.24666667 0.086217696 4.228406216 2.737482452 7 7 7 0.1 dme-miR-999-3p 6mer3-8 AGTTAA 3R 10312110 10312115 - 3R_10312110_10312115_- 0.999985973 0.999990541 0.999988257 3.18E-06 Bruce FBtr0331684|FBtr0331682|FBtr0082239|FBtr0331683|FBtr0331681 10312037|10312037|10312037|10312037|10312037 10312643|10312643|10312643|10312643|10312643 3R - 10312093 10312135 3'utr Bruce FlyBase G49875.1 ATGTATGAACGTAGTGATTTAGTTAAATATTGACACAAGAATA 40 10312117 0.890763749 5 36 333 0.918367347 1.352182518 0.142857143 0.225 0.367346939 40 3 1 45 3R:10312093-10312135 6 Bruce FBtr0331681|FBtr0331683|FBtr0082239|FBtr0331682|FBtr0331684 10312037|10312037|10312037|10312037|10312037 10312643|10312643|10312643|10312643|10312643 AGTTAA 6mer3-8 dme-miR-999-3p 3R - 10312101 10312139 3'utr Bruce FlyBase G37702.1 AACTATGTATGAACGTAGTGATTTAGTTAAATATTGACA 18 10312117 0.704239503 4 18 149 1 1.380211242 0.125 0.333333333 0.5 18 0 0 24 3R:10312101-10312139 6 29 2942 FBgn0266717 4248.75 33.1 50.67666667 0.006825537 0.876132931 0.572255476 2 2 2 0.1 dme-miR-965-3p 8mer-A1 TACGCTTA 3R 10360332 10360339 + 3R_10360332_10360339_+ 0.625364614 0.625364842 0.625364728 1.41E-07 jumu FBtr0082237 10360257 10361612 3R + 10360291 10360360 3'utr jumu FlyBase G41772.1 ATCAATTAGTTTTAGACCTTTGGCATTTAAGAAACCCATGCTACGCTTAAACGTAATCCTAGAAGCCCCA 54 10360332 0.79811269 7 53 237 1 1.826074803 0.298507463 0.203703704 0.358208955 54 0 0 67 3R:10360291-10360360 8 jumu FBtr0082237 10360257 10361612 TACGCTTA 8mer-A1 dme-miR-965-3p 3R + 10360294 10360355 3'utr jumu FlyBase G31514.1 AATTAGTTTTAGACCTTTGGCATTTAAGAAACCCATGCTACGCTTAAACGTAATCCTAGAAG 55 10360332 0.768103162 8 50 250 0.918604651 1.2955671 0.348837209 0.309090909 0.558139535 55 4 3 79 3R:10360294-10360355 8 45 2943 FBgn0015396 1426.553333 44.76666667 68.68333333 0.031544562 1.005212211 0.655180781 0 0 0 0.1 dme-bantam-3p 7mer-m8 TGATCTC 3R 10360735 10360741 + 3R_10360735_10360741_+ 0.661615104 0.661615225 0.661615164 7.07E-08 jumu FBtr0082237 10360257 10361612 3R + 10360707 10360817 3'utr jumu FlyBase G41776.2 GAGCTGGTTTGAGTTGCAACTTTTGATTTGATCTCCCTACTGACAAATAAATTTTCATCCTTCAATCGATAAGAAACTTGACAATGCATTTATGACAAACGATTCCACGCT 95 10360734 0.769639749 17 90 867 0.946902655 2.029383778 0.088495575 0.147368421 0.283185841 95 6 0 107 3R:10360707-10360817 7 jumu FBtr0082237 10360257 10361612 TGATCTC 7mer-m8 dme-bantam-3p 3R + 10360663 10360815 3'utr jumu FlyBase G31516.1 CCACTGACGACGCATGAAGCATGTTAATACTTTTTACCAGACTCGAGCTGGTTTGAGTTGCAACTTTTGATTTGATCTCCCTACTGACAAATAAATTTTCATCCTTCAATCGATAAGAAACTTGACAATGCATTTATGACAAACGATTCCACG 80 10360734 0.954561351 21 75 714 0.922330097 1.375663614 0.067961165 0.2625 0.427184466 80 5 3 95 3R:10360663-10360815 7 68 2944 FBgn0015396 1426.553333 44.76666667 68.68333333 0.047667338 1.518987342 0.990050959 1 1 1 0.1 dme-miR-8-3p 7mer-m8 CAGTATT 3R 10361004 10361010 + 3R_10361004_10361010_+ 0.646052061 0.636385631 0.641218846 0.006835248 jumu FBtr0082237 10360257 10361612 3R + 10360968 10361027 3'utr jumu FlyBase G41778.1 AATTGAAAGAGAATTGATCACACATACTTGCCGGTCCAGTATTCGTAAGCGAGGTATATT 95 10360997 0.849758722 10 92 592 0.983471074 2.075546961 0.132231405 0.210526316 0.380165289 95 2 0 119 3R:10360968-10361027 7 jumu FBtr0082237 10360257 10361612 CAGTATT 7mer-m8 dme-miR-8-3p 3R + 10360967 10361038 3'utr jumu FlyBase G31517.1 AAATTGAAAGAGAATTGATCACACATACTTGCCGGTCCAGTATTCGTAAGCGAGGTATATTGAGGATTTTTA 73 10360997 0.853718753 11 72 437 0.962616822 2.012837225 0.112149533 0.301369863 0.523364486 73 4 0 103 3R:10360967-10361038 7 72.5 2945 FBgn0015396 1426.553333 44.76666667 68.68333333 0.050821794 1.619508563 1.055569037 7 7 7 0.1 dme-miR-14-3p 6mer3-8 AAGACT 3R 10361265 10361270 + 3R_10361265_10361270_+ 0.999871841 0.999904351 0.999888096 2.31E-05 jumu FBtr0082237 10360257 10361612 3R + 10361218 10361339 3'utr jumu FlyBase G41779.1 TGTAAACGAAATCCGAATTCCAAATAATACAAGATACGAAAACCAATAAGACTTAAAAGAAGCGTACCAGACTAATGAACATGATCAGGCCTCAGAAGTAAATAGTACAAAGAGCTAGACTT 141 10361264 0.980647242 12 116 397 0.866666667 1.377184787 0.218181818 0.113475177 0.242424242 141 17 5 143 3R:10361218-10361339 6 jumu FBtr0082237 10360257 10361612 AAGACT 6mer3-8 dme-miR-14-3p 3R + 10361248 10361334 3'utr jumu FlyBase G31519.1 AAGATACGAAAACCAATAAGACTTAAAAGAAGCGTACCAGACTAATGAACATGATCAGGCCTCAGAAGTAAATAGTACAAAGAGCTA 82 10361264 0.947483738 7 67 196 0.879032258 2.037426498 0.346774194 0.37804878 0.588709677 82 15 0 109 3R:10361248-10361334 6 69.5 2946 FBgn0015396 1426.553333 44.76666667 68.68333333 0.048718823 1.552494415 1.011890318 1 1 1 0.1 dme-miR-11-3p 7mer-m1 TGTGATG 3R 10361417 10361423 + 3R_10361417_10361423_+ 0.612058508 0.612070516 0.612064512 8.49E-06 jumu FBtr0082237 10360257 10361612 3R + 10361396 10361509 3'utr jumu FlyBase G41780.1 TTTGTTATTACCCTTTTCTTTTGTGATGCTTCGACTTAGCTTGCGCATTTAACAATTCCATTTACGAACCAGGAACATTTATGCATTTTTTGTTGTAATATTAGCACCTAAATA 52 10361415 0.94948096 19 51 525 0.969230769 1.799340549 0.307692308 0.230769231 0.384615385 52 2 0 63 3R:10361396-10361509 7 jumu FBtr0082237 10360257 10361612 TGTGATG 7mer-m1 dme-miR-11-3p 3R + 10361370 10361556 3'utr jumu FlyBase G31520.1 AGGATGGCTGATGGAATTAAACCGTTTTTGTTATTACCCTTTTCTTTTGTGATGCTTCGACTTAGCTTGCGCATTTAACAATTCCATTTACGAACCAGGAACATTTATGCATTTTTTGTTGTAATATTAGCACCTAAATATTGTATTTAATCATTAAGTGAAGCTCTGTAAATCTTTAAGCTAAGAA 45 10361415 0.991478366 25 41 442 0.921875 1.469822016 0.375 0.311111111 0.515625 45 4 1 59 3R:10361370-10361556 7 22.5 2947 FBgn0015396 1426.553333 44.76666667 68.68333333 0.015772281 0.502606106 0.327590391 2 2 2 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 3R 10361477 10361483 + 3R_10361477_10361483_+ 0.620204266 0.604440815 0.612322541 0.011146478 jumu FBtr0082237 10360257 10361612 3R + 10361396 10361509 3'utr jumu FlyBase G41780.1 TTTGTTATTACCCTTTTCTTTTGTGATGCTTCGACTTAGCTTGCGCATTTAACAATTCCATTTACGAACCAGGAACATTTATGCATTTTTTGTTGTAATATTAGCACCTAAATA 52 10361485 0.94948096 19 51 525 0.969230769 1.799340549 0.307692308 0.230769231 0.384615385 52 2 0 63 3R:10361396-10361509 7 jumu FBtr0082237 10360257 10361612 TGCATTT 7mer-m8 dme-miR-277-3p 3R + 10361370 10361556 3'utr jumu FlyBase G31520.1 AGGATGGCTGATGGAATTAAACCGTTTTTGTTATTACCCTTTTCTTTTGTGATGCTTCGACTTAGCTTGCGCATTTAACAATTCCATTTACGAACCAGGAACATTTATGCATTTTTTGTTGTAATATTAGCACCTAAATATTGTATTTAATCATTAAGTGAAGCTCTGTAAATCTTTAAGCTAAGAA 45 10361484 0.991478366 25 41 442 0.921875 1.469822016 0.375 0.311111111 0.515625 45 4 1 59 3R:10361370-10361556 7 18 2948 FBgn0015396 1426.553333 44.76666667 68.68333333 0.012617825 0.402084885 0.262072313 -8 -7 -7.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 10399396 10399401 + 3R_10399396_10399401_+ 0.999999428 0.999996569 0.999997998 1.98E-06 cwo FBtr0082246|FBtr0082246|FBtr0082246|FBtr0305152|FBtr0305152|FBtr0305152|FBtr0305151|FBtr0305151|FBtr0305151 10399337|10399337|10399337|10399337|10399337|10399337|10399337|10399337|10399337 10400752|10400752|10400752|10400752|10400752|10400752|10400752|10400752|10400752 3R + 10399279 10399422 stop_codon cwo FlyBase G41802.1 GTGGCCGCCGCAGCGGTGGCTAAGGCCAAACTGGAGCAGGCCATGAACCAGAGCTGGTAAAGCAAAGCAATCGCAATGCAATGGGTCGACAGATGGAACAACACTACCTCAGTACTTCTGTGAATAATCATTAAATGATTAATC 78 10399395 0.9785535 14 73 483 0.944444444 1.929418926 0.344444444 0.08974359 0.211111111 78 5 0 85 3R:10399279-10399422 6 cwo FBtr0305151|FBtr0305151|FBtr0305151|FBtr0082246|FBtr0082246|FBtr0082246|FBtr0305152|FBtr0305152|FBtr0305152 10399337|10399337|10399337|10399337|10399337|10399337|10399337|10399337|10399337 10400752|10400752|10400752|10400752|10400752|10400752|10400752|10400752|10400752 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 10399307 10399411 stop_codon cwo FlyBase G31537.1 AACTGGAGCAGGCCATGAACCAGAGCTGGTAAAGCAAAGCAATCGCAATGCAATGGGTCGACAGATGGAACAACACTACCTCAGTACTTCTGTGAATAATCATTA 38 10399395 0.976328673 13 35 224 0.896551724 1.716003344 0.24137931 0.421052632 0.620689655 38 6 0 52 3R:10399307-10399411 6 33 2949 FBgn0259938 1085.47 27.38 41.65666667 0.030401577 1.205259313 0.792190126 1 1 1 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 10399460 10399465 + 3R_10399460_10399465_+ 0.999844903 0.999871791 0.999858347 1.90E-05 cwo FBtr0082246|FBtr0305152|FBtr0305151 10399337|10399337|10399337 10400752|10400752|10400752 3R + 10399435 10399478 3'utr cwo FlyBase G41803.1 CACTAAGCGACATCTGCGCCCAAGTGTACCTACATACAAACAGA 59 10399459 0.886641848 3 58 291 0.967741935 1.77815125 0.032258065 0.050847458 0.096774194 59 2 0 60 3R:10399435-10399478 6 cwo FBtr0305151|FBtr0082246|FBtr0305152 10399337|10399337|10399337 10400752|10400752|10400752 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 10399439 10399479 3'utr cwo FlyBase G31538.1 AAGCGACATCTGCGCCCAAGTGTACCTACATACAAACAGAA 20 10399459 0.874813027 2 19 97 0.9375 1.477121255 0 0.4 0.625 20 2 0 30 3R:10399439-10399479 6 39.5 2950 FBgn0259938 1085.47 27.38 41.65666667 0.036389767 1.442658875 0.948227575 1 1 1 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 3R 10400000 10400005 + 3R_10400000_10400005_+ 0.990879845 0.994378454 0.992629149 0.002473954 cwo FBtr0082246|FBtr0305152|FBtr0305151 10399337|10399337|10399337 10400752|10400752|10400752 3R + 10399922 10400109 3'utr cwo FlyBase G41807.1 GTGCAAGCCGATAGAACGTATATGATGCCAAGAGTCAGTCCCACGTAAAAAATCTAATGGATTTTAAAACAAAACTAAATGTGAATTAAATGTATTTTTAGAGGTTAAACGTTTTTTGCAATTTAAATAAGTGTTGTGGTTTCATATAAGGTAGTCAGATAGCCAAGTGACTCCCGTCAAACAAACAA 156 10400007 0.812963609 22 152 1032 0.974489796 2.281033367 0.290816327 0.192307692 0.357142857 156 5 0 191 3R:10399922-10400109 6 cwo FBtr0305151|FBtr0082246|FBtr0305152 10399337|10399337|10399337 10400752|10400752|10400752 ATGTGA 6mer3-8 dme-miR-1003-3p 3R + 10399933 10400032 3'utr cwo FlyBase G31540.1 TAGAACGTATATGATGCCAAGAGTCAGTCCCACGTAAAAAATCTAATGGATTTTAAAACAAAACTAAATGTGAATTAAATGTATTTTTAGAGGTTAAACG 111 10400007 0.748005682 11 102 645 0.919463087 1.835690571 0.409395973 0.272727273 0.463087248 110 11 1 137 3R:10399933-10400032 6 103.5 2951 FBgn0259938 1085.47 27.38 41.65666667 0.095350401 3.780131483 2.484596303 -7 -7 -7 0.1 dme-miR-283-5p 7mer-A1 GATATTA 3R 10403056 10403062 - 3R_10403056_10403062_- 0.767295212 0.782508814 0.774902013 0.01075764 CG6325 FBtr0082260 10402965 10403647 3R - 10402997 10403076 3'utr CG6325 FlyBase G49960.1 GAACTACGTTTCAAGATATTAAACATAAGAAATACAATTCAAGATATTGTTCAGGAAGTCTCCAGTCCTCTAAAGTAATG 9 10403067 0.923203949 5 9 56 1 1.079181246 0.333333333 0.222222222 0.416666667 9 0 0 12 3R:10402997-10403076 7 CG6325 FBtr0082260 10402965 10403647 GATATTA 7mer-A1 dme-miR-283-5p 3R - 10403034 10403080 3'utr CG6325 FlyBase G37772.2 CTAGGAACTACGTTTCAAGATATTAAACATAAGAAATACAATTCAAG 10 10403067 0.972669318 4 5 42 0.666666667 0.698970004 0 0.3 0.533333333 10 4 1 10 3R:10403034-10403080 7 5 2952 FBgn0037814 441 14.70666667 22.57666667 0.011337868 0.339981868 0.221467592 5 5 5 0.1 dme-miR-8-3p 6mer2-7 AGTATT 3R 10403397 10403402 - 3R_10403397_10403402_- 0.999999975 0.999917671 0.999958823 5.82E-05 CG6325 FBtr0082260 10402965 10403647 3R - 10403308 10403479 3'utr CG6325 FlyBase G49962.2 AGTTTTTAGTTTGCAAAACTCGATAAGGTTGCGTGCATCTAGTTCAGTTCTAAACACAAACAACGTGTGCTGTATTTAGTATTTAGTTACCTATACCTTACTTAGTGCAACGAAACGCTTTTCAAAAACATGAAACGCGTCCTTATTTCGACTGAAGTCATTTAAGTAATCT 293 10403414 0.859314629 32 274 2305 0.947513812 2.058172865 0.132596685 0.184300341 0.339779006 293 17 2 343 3R:10403308-10403479 6 CG6325 FBtr0082260 10402965 10403647 AGTATT 6mer2-7 dme-miR-8-3p 3R - 10403309 10403472 3'utr CG6325 FlyBase G37774.1 AGTTTGCAAAACTCGATAAGGTTGCGTGCATCTAGTTCAGTTCTAAACACAAACAACGTGTGCTGTATTTAGTATTTAGTTACCTATACCTTACTTAGTGCAACGAAACGCTTTTCAAAAACATGAAACGCGTCCTTATTTCGACTGAAGTCATTTAAGTAATC 218 10403413 0.884402294 25 212 1702 0.975683891 1.728353782 0.170212766 0.366972477 0.580547112 218 3 5 321 3R:10403309-10403472 6 84.5 2953 FBgn0037814 441 14.70666667 22.57666667 0.191609977 5.745693563 3.742802303 12 11 11.5 0.1 dme-miR-970-3p 7mer-A1 CTTATGA 3R 10766323 10766329 + 3R_10766323_10766329_+ 0.77004205 0.793559661 0.781800855 0.016629525 Cap-H2 FBtr0301310|FBtr0302571|FBtr0301311 10765896|10765896|10765896 10766756|10766756|10766756 3R + 10766297 10766325 3'utr Cap-H2 FlyBase G41830.1 TTAACTTTTTACGACGCTTTTAGTTGCTT 5 10766317 0.684581017 3 5 56 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 3R:10766297-10766325 3 Cap-H2 FBtr0302571|FBtr0301311|FBtr0301310 10765896|10765896|10765896 10766756|10766756|10766756 CTTATGA 7mer-A1 dme-miR-970-3p 3R + 10766295 10766329 3'utr Cap-H2 FlyBase G31562.1 TTTTAACTTTTTACGACGCTTTTAGTTGCTTATGA 6 10766316 0.76784728 2 6 72 1 1.079181246 0.25 0.5 0.75 6 0 0 12 3R:10766295-10766329 7 3 2954 FBgn0037831 545.8533333 16.72666667 25.64 0.005495982 0.179354324 0.11700468 6 7 6.5 0.1 dme-bantam-3p 7mer-m8 TGATCTC 3R 10766554 10766560 + 3R_10766554_10766560_+ 0.527804363 0.592420142 0.560112253 0.0456902 Cap-H2 FBtr0301310|FBtr0302571|FBtr0301311 10765896|10765896|10765896 10766756|10766756|10766756 3R + 10766449 10766688 stop_codon Cap-H2 FlyBase G41832.1 CTATACCTCCTTTGATTTAGAACAAAAATAGACAAATGACTTTTTGATTGACGAAGCGCGTGTTTTGGAAATCCTCATGAGCTGATAGTACTAAATTCAAGTACCTGATCTCGTCTGTACAAAAGTATAAACATAAGAACTCTTCGGACATAAGACAAAGTTCAAGATAAATTAAGGATAAAGTGTATATATACGTATGTATTTACCAGAGTGCAAGCTAGTGTCTATTTACAATCATTT 205 10766554 0.858930827 32 182 1387 0.881355932 1.363820826 0.233050847 0.131707317 0.245762712 205 20 8 208 3R:10766449-10766688 7 Cap-H2 FBtr0302571|FBtr0301311|FBtr0301310 10765896|10765896|10765896 10766756|10766756|10766756 TGATCTC 7mer-m8 dme-bantam-3p 3R + 10766467 10766744 stop_codon Cap-H2 FlyBase G31563.1 AGAACAAAAATAGACAAATGACTTTTTGATTGACGAAGCGCGTGTTTTGGAAATCCTCATGAGCTGATAGTACTAAATTCAAGTACCTGATCTCGTCTGTACAAAAGTATAAACATAAGAACTCTTCGGACATAAGACAAAGTTCAAGATAAATTAAGGATAAAGTGTATATATACGTATGTATTTACCAGAGTGCAAGCTAGTGTCTATTTACAATCATTTTAAGATATAATGTTTTTTTCGTAAGTATAACGTGTAGTTCTTAAGGAATAAAACGG 153 10766555 0.983348056 33 136 1043 0.8647343 1.349763044 0.173913043 0.287581699 0.473429952 153 21 7 179 3R:10766467-10766744 7 113.5 2955 FBgn0037831 545.8533333 16.72666667 25.64 0.207931312 6.785571941 4.426677067 0 -1 -0.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 10786616 10786621 - 3R_10786616_10786621_- 0.999995667 1 0.999997833 3.04E-06 Art1 FBtr0082304 10786479 10786765 3R - 10786566 10786639 3'utr Art1 FlyBase G50013.1 TTCTCCTAAGTTTAAAGTGTACCTTTGTTAGTATACATAATATTTTACACTCGTGCGCCTGTTTAAATTATTAT 43 10786622 0.886610587 4 42 430 0.980392157 1.397940009 0.058823529 0.162790698 0.294117647 43 0 1 50 3R:10786566-10786639 6 Art1 FBtr0082304 10786479 10786765 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 10786566 10786684 3'utr Art1 FlyBase G37813.1 AAGGTTTATTCCAGTGCGAAATGTGCAACGAATTCGTGTTGCGTCTTCTCCTAAGTTTAAAGTGTACCTTTGTTAGTATACATAATATTTTACACTCGTGCGCCTGTTTAAATTATTAT 42 10786622 0.98844668 10 38 386 0.948275862 1.740362689 0.068965517 0.357142857 0.534482759 42 3 0 55 3R:10786566-10786684 6 36 2956 FBgn0037834 664.3333333 53.06 81.07333333 0.054189664 0.678477196 0.444042431 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 10817146 10817151 + 3R_10817146_10817151_+ 0.999993086 0.999996697 0.999994891 2.55E-06 CG4089 FBtr0082281|FBtr0082281|FBtr0082281 10817111|10817111|10817111 10817490|10817490|10817490 3R + 10817120 10817177 3'utr CG4089 FlyBase G41844.1 TAATTATCTTCTTATGTAAATACTTACTGTGACATGGTAACCTCTTATGCTCAGCATT 21 10817144 0.887322493 6 21 150 1 1.342422681 0.045454545 0.047619048 0.090909091 21 0 0 22 3R:10817120-10817177 6 CG4089 FBtr0082281|FBtr0082281|FBtr0082281 10817111|10817111|10817111 10817490|10817490|10817490 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 10817129 10817188 3'utr CG4089 FlyBase G31575.1 TCTTATGTAAATACTTACTGTGACATGGTAACCTCTTATGCTCAGCATTAGTTAATTGGC 19 10817144 0.982143272 9 19 132 1 1.491361694 0.225806452 0.421052632 0.64516129 19 0 0 31 3R:10817129-10817188 6 16.5 2957 FBgn0037838 56.27 3.373333333 5.153333333 0.293229074 4.891304348 3.201811125 2 2 2 0.1 dme-miR-184-3p 6mer2-7 CCGTCC 3R 10817322 10817327 + 3R_10817322_10817327_+ 0.991068671 0.999086619 0.995077645 0.005669511 CG4089 FBtr0082281 10817111 10817490 3R + 10817273 10817344 3'utr CG4089 FlyBase G41845.1 ATGGAAACCATCTAGACACTTTGGCAATGAAACATGTACAAATACAAAACCGTCCTTAAATTATTTTAAATT 44 10817328 0.700613459 10 41 237 0.964912281 1.740362689 0.087719298 0.25 0.421052632 44 2 0 55 3R:10817273-10817344 6 CG4089 FBtr0082281 10817111 10817490 CCGTCC 6mer2-7 dme-miR-184-3p 3R + 10817303 10817342 3'utr CG4089 FlyBase G31576.1 AACATGTACAAATACAAAACCGTCCTTAAATTATTTTAAA 33 10817328 0.645402574 5 30 144 0.960784314 1.213074825 0 0.393939394 0.607843137 33 0 2 49 3R:10817303-10817342 6 30 2958 FBgn0037838 56.27 3.373333333 5.153333333 0.533143771 8.893280632 5.821474774 -6 -6 -6 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 10856097 10856102 + 3R_10856097_10856102_+ 0.999999665 0.999999999 0.999999832 2.12E-07 CG4511 FBtr0302202|FBtr0082286 10855766|10855766 10856412|10856412 3R + 10856080 10856121 3'utr CG4511 FlyBase G41852.2 TAAGCGAACTCAAAATTTGATCTTTATGGTATTTGCAATTCC 37 10856096 0.671803122 10 37 337 1 1.602059991 0.375 0.081081081 0.15 37 0 0 40 3R:10856080-10856121 6 CG4511 FBtr0302202|FBtr0082286 10855766|10855766 10856412|10856412 TGATCT 6mer3-8 dme-bantam-3p 3R + 10856072 10856115 3'utr CG4511 FlyBase G31583.1 AGCGAGCTTAAGCGAACTCAAAATTTGATCTTTATGGTATTTGC 31 10856096 0.945136748 7 31 256 1 1.69019608 0.183673469 0.419354839 0.632653061 31 0 0 49 3R:10856072-10856115 6 31.5 2959 FBgn0037843 1348.566667 118.0666667 181.7 0.023358133 0.266798419 0.173362686 1 1 1 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 10857909 10857914 + 3R_10857909_10857914_+ 0.999999848 0.999984043 0.999991946 1.12E-05 CG4570 FBtr0082287 10857844 10858066 3R + 10857890 10857920 3'utr CG4570 FlyBase G41860.1 TTGAAAATAACGACGTTCATGATCTTGTTTA 12 10857909 0.681254338 4 12 101 1 1.278753601 0 0.416666667 0.631578947 12 0 0 19 3R:10857890-10857920 6 CG4570 FBtr0082287 10857844 10858066 TGATCT 6mer3-8 dme-bantam-3p 3R + 10857897 10857922 3'utr CG4570 FlyBase G31587.1 TAACGACGTTCATGATCTTGTTTAAT 8 10857917 0.572137203 4 8 65 1 1.113943352 0 0.25 0.538461538 8 0 0 13 3R:10857897-10857922 6 10 2960 FBgn0037844 66 6.4 9.756666667 0.151515152 1.5625 1.024940212 0 -8 -4 0.1 dme-miR-92b-3p 7mer-A1 TGCAATA 3R 10870323 10870329 + 3R_10870323_10870329_+ 0.78289146 0.781380329 0.782135894 0.00106858 Tsp86D FBtr0330150|FBtr0082288 10870039|10869964 10870555|10870555 3R + 10870258 10870368 3'utr Tsp86D FlyBase G41868.1 AAACGTCAGCGCATTCTTAGTCACAAGTAAAGTCGAACACATCTAAAGTTTTACTCTTATACGTATGCAATATCAGACTATTTAAAAGACACTTGTGTATAAGCTAGCGAG 22 10870338 0.968045905 7 22 128 1 1.447158031 0.357142857 0.272727273 0.428571429 22 0 0 28 3R:10870258-10870368 7 Tsp86D FBtr0082288|FBtr0330150 10869964|10870039 10870555|10870555 TGCAATA 7mer-A1 dme-miR-92b-3p 3R + 10870286 10870434 3'utr Tsp86D FlyBase G31594.1 AAAGTCGAACACATCTAAAGTTTTACTCTTATACGTATGCAATATCAGACTATTTAAAAGACACTTGTGTATAAGCTAGCGAGTTCCATAAGAAATATGCATTTAAAATGAGATTTATATGTAACGACGAAACCAAAACTGCATGCATG 38 10870338 0.979473894 19 36 243 0.964912281 1.740362689 0.280701754 0.394736842 0.596491228 38 2 0 55 3R:10870286-10870434 7 11 2961 FBgn0037848 356.0066667 24.29333333 37.27666667 0.030898298 0.452799122 0.295090763 -15 -15 -15 0.1 dme-miR-965-3p 7mer-m8 TACGCTT 3R 10895356 10895362 + 3R_10895356_10895362_+ 0.620189139 0.620180688 0.620184913 5.94E-06 Leash FBtr0082325 10895233 10896418 3R + 10895340 10895443 3'utr Leash FlyBase G41875.1 TATATCCTAGACCTTCTACGCTTCGAGCACAAACCATATGCAAATTGTGCACAAATCAAGTTATACGCTGATATACCCTATTTATGTTTACCTTTGATTTCACC 39 10895356 0.848308308 12 37 240 0.941176471 1.204119983 0.058823529 0.205128205 0.392156863 39 1 2 48 3R:10895340-10895443 7 Leash FBtr0082325 10895233 10896418 TACGCTT 7mer-m8 dme-miR-965-3p 3R + 10895339 10895376 3'utr Leash FlyBase G31600.1 ATATATCCTAGACCTTCTACGCTTCGAGCACAAACCAT 17 10895356 0.950258499 3 17 84 1 1.380211242 0.291666667 0.235294118 0.458333333 17 0 0 24 3R:10895339-10895376 7 21 2962 FBgn0037856 180.5566667 6.93 10.65333333 0.116306977 3.03030303 1.971214018 0 0 0 0.1 dme-miR-190-5p 6mer3-8 ACATAT 3R 10895928 10895933 + 3R_10895928_10895933_+ 0.947912779 0.885101825 0.916507302 0.044414084 Leash FBtr0082325 10895233 10896418 3R + 10895874 10895955 3'utr Leash FlyBase G41876.1 TGCGAATTACTCAAAGACTCATGAGTATTTATGTCACCACTCACTATACTCGAAACATATTTCCTGCCCGCCTATTTATCTT 61 10895934 0.833636204 6 58 343 0.962962963 1.892094603 0.024691358 0.245901639 0.432098765 61 3 0 78 3R:10895874-10895955 6 Leash FBtr0082325 10895233 10896418 ACATAT 6mer3-8 dme-miR-190-5p 3R + 10895904 10895951 3'utr Leash FlyBase G31602.1 ATGTCACCACTCACTATACTCGAAACATATTTCCTGCCCGCCTATTTA 25 10895934 0.964025455 4 25 131 1 1.612783857 0 0.56 0.731707317 25 0 0 41 3R:10895904-10895951 6 37.5 2963 FBgn0037856 180.5566667 6.93 10.65333333 0.20769103 5.411255411 3.520025031 -6 -6 -6 0.1 dme-miR-79-3p 7mer-A1 AGCTTTA 3R 10896174 10896180 + 3R_10896174_10896180_+ 0.823307045 0.823339406 0.823323225 2.29E-05 Leash FBtr0082325 10895233 10896418 3R + 10896148 10896196 3'utr Leash FlyBase G41878.1 AGACGCGAAGAATCAATGAATCAATAAGCTTTAGTGCCTCTGTATGATG 62 10896172 0.889442763 3 61 445 0.984848485 1.812913357 0.575757576 0.064516129 0.121212121 62 1 0 65 3R:10896148-10896196 7 Leash FBtr0082325 10895233 10896418 AGCTTTA 7mer-A1 dme-miR-79-3p 3R + 10896149 10896199 3'utr Leash FlyBase G31604.1 GACGCGAAGAATCAATGAATCAATAAGCTTTAGTGCCTCTGTATGATGAAC 33 10896172 0.886276381 5 33 243 1 1.672097858 0.446808511 0.333333333 0.531914894 33 0 0 47 3R:10896149-10896199 7 47 2964 FBgn0037856 180.5566667 6.93 10.65333333 0.26030609 6.782106782 4.411764706 2 2 2 0.1 "dme-miR-995-3p,dme-miR-998-3p" 6mer2-7 GGTGCT 3R 10896323 10896328 + 3R_10896323_10896328_+ 0.998425986 0.99989059 0.999158288 0.001035629 Leash FBtr0082325 10895233 10896418 3R + 10896302 10896340 3'utr Leash FlyBase G41879.1 ACGATCAAACGATTTCGTTAAGGTGCTTTACAAATCACT 18 10896329 0.764825833 2 16 138 0.869565217 0.823908741 0.086956522 0.277777778 0.434782609 18 1 2 20 3R:10896302-10896340 6 Leash FBtr0082325 10895233 10896418 GGTGCT 6mer2-7 "dme-miR-995-3p,dme-miR-998-3p" 3R + 10896302 10896337 3'utr Leash FlyBase G31605.1 ACGATCAAACGATTTCGTTAAGGTGCTTTACAAATC 13 10896329 0.936913917 3 12 109 0.857142857 0.653212514 0 0.538461538 0.714285714 13 0 3 18 3R:10896302-10896337 6 15 2965 FBgn0037856 180.5566667 6.93 10.65333333 0.083076412 2.164502165 1.408010013 -6 -6 -6 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 11170840 11170845 - 3R_11170840_11170845_- 0.991906951 0.989941965 0.990924458 0.001389465 Ugt35a FBtr0082374|FBtr0082374|FBtr0082374 11170815|11170815|11170815 11170943|11170943|11170943 3R - 11170826 11170880 3'utr Ugt35a FlyBase G50060.1 AGTAAACATTTGCATTTTTGTTTTGTTACCAGCACCTGTGAATTAATTTTTAAAT 37 11170838 0.983040076 7 36 297 0.976190476 1.311753861 0.357142857 0.135135135 0.238095238 37 0 1 41 3R:11170826-11170880 6 Ugt35a FBtr0082374|FBtr0082374|FBtr0082374 11170815|11170815|11170815 11170943|11170943|11170943 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 11170825 11170924 3'utr Ugt35a FlyBase G37853.1 TGTTTGAGTTCATGCCGCCACCGACTTATGTTTCCTCTTAGAGCAGTAAACATTTGCATTTTTGTTTTGTTACCAGCACCTGTGAATTAATTTTTAAATA 34 11170838 0.755976696 10 34 246 1 1.698970004 0.34 0.382352941 0.58 34 0 0 50 3R:11170825-11170924 6 28.5 2966 FBgn0026315 870 59.03666667 89.87 0.032758621 0.482750833 0.317124736 -7 -7 -7 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 11212513 11212518 - 3R_11212513_11212518_- 0.999990027 0.999981796 0.999985911 5.80E-06 ZnT86D FBtr0082371 11212306 11212867 3R - 11212499 11212537 3'utr ZnT86D FlyBase G50069.1 AAGCTAAGCGAAAGATTTTGTGCAAAGGTAAATATAAAT 7 11212520 0.839247432 3 6 35 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 3R:11212499-11212537 6 ZnT86D FBtr0082371 11212306 11212867 GTGCAA 6mer3-8 dme-miR-92b-3p 3R - 11212509 11212550 3'utr ZnT86D FlyBase G37860.1 TTAGTGTAATTGTAAGCTAAGCGAAAGATTTTGTGCAAAGGT 6 11212520 0.622986519 4 6 33 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 3R:11212509-11212550 6 4.5 2967 FBgn0037875 198.6666667 12.00333333 18.26333333 0.022651007 0.374895862 0.246395328 2 2 2 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 11212826 11212831 - 3R_11212826_11212831_- 0.9670567 0.980557958 0.973807329 0.009546861 ZnT86D FBtr0082371 11212306 11212867 3R - 11212811 11212859 3'utr ZnT86D FlyBase G50071.1 GGATCGACCCACCGGTGTCCTTGTACAATGATCTGTATAGTTATCAGCG 27 11212831 0.987790576 6 26 247 0.965517241 1.447158031 0.206896552 0.074074074 0.137931034 27 1 0 28 3R:11212811-11212859 6 ZnT86D FBtr0082371 11212306 11212867 TGATCT 6mer3-8 dme-bantam-3p 3R - 11212812 11212859 3'utr ZnT86D FlyBase G37862.1 GGATCGACCCACCGGTGTCCTTGTACAATGATCTGTATAGTTATCAGC 23 11212831 0.989071878 6 19 185 0.838709677 1.113943352 0.225806452 0.260869565 0.451612903 23 4 1 26 3R:11212812-11212859 6 24.5 2968 FBgn0037875 198.6666667 12.00333333 18.26333333 0.123322148 2.041099695 1.341485673 0 0 0 0.1 dme-miR-2a-2-5p 7mer-m1 GATGAGG 3R 11223253 11223259 + 3R_11223253_11223259_+ 0.825566877 0.82558235 0.825574613 1.09E-05 RpL3 FBtr0302586 11223138 11224944 3R + 11223193 11223269 3'utr RpL3 FlyBase G41912.1 AAATTGCCTGACGAGTGAGCATGACAAGGAAGACTGCATCTCCGCTCGCCATTCGTTTGCGATGAGGCGCACTTCCT 10 11223249 0.95222705 7 10 48 1 1.113943352 0.076923077 0.3 0.461538462 10 0 0 13 3R:11223193-11223269 7 RpL3 FBtr0302586 11223138 11224944 GATGAGG 7mer-m1 dme-miR-2a-2-5p 3R + 11223223 11223264 3'utr RpL3 FlyBase G31633.1 AGACTGCATCTCCGCTCGCCATTCGTTTGCGATGAGGCGCAC 7 11223249 0.966904424 4 7 36 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 3R:11223223-11223264 7 6 2969 FBgn0020910 9247.463333 756.2966667 1140.143333 0.000648827 0.007933395 0.005262496 4 4 4 0.1 dme-bantam-3p 7mer-m8 TGATCTC 3R 11223446 11223452 + 3R_11223446_11223452_+ 0.661574296 0.661579667 0.661576981 3.82E-06 RpL3 FBtr0302586 11223138 11224944 3R + 11223399 11223529 3'utr RpL3 FlyBase G41913.1 AAGAGCAAGAAGAAGGCATTCACCAAGGCCAGCAAGAAGTGGACCGATGATCTCGGCAAGAAGAGCATCGAGAATGACTTCCGCAAGATGCTGCGCTACTGCAAGGTGATCCGTGTGATTGCCCACTCGCA 144 11223446 0.92949195 14 142 493 0.988372093 1.929418926 0.168604651 0.166666667 0.302325581 144 1 1 170 3R:11223399-11223529 7 RpL3 FBtr0302586 11223138 11224944 TGATCTC 7mer-m8 dme-bantam-3p 3R + 11223422 11223530 3'utr RpL3 FlyBase G31634.1 CAAGGCCAGCAAGAAGTGGACCGATGATCTCGGCAAGAAGAGCATCGAGAATGACTTCCGCAAGATGCTGCGCTACTGCAAGGTGATCCGTGTGATTGCCCACTCGCAG 97 11223446 0.928367373 12 95 360 0.978571429 2.136720567 0.307142857 0.329896907 0.535714286 97 3 0 137 3R:11223422-11223530 7 89.5 2970 FBgn0020910 9247.463333 756.2966667 1140.143333 0.00967833 0.118339805 0.078498902 0 0 0 0.1 dme-miR-7-5p 6mer3-8 GTCTTC 3R 11223984 11223989 + 3R_11223984_11223989_+ 0.989643545 0.999952861 0.994798203 0.007289847 RpL3 FBtr0302586 11223138 11224944 3R + 11223922 11224018 3'utr RpL3 FlyBase G41914.1 CCATCGAGGACAAGGTCAAGTGGGCTCGCGAGCATTTGGAGAAGCCCATCCAGGTCAGCAACGTCTTCGGCCAGGACGAGATGATCGACTGCGTTGG 39 11224004 0.940404484 12 37 148 0.930232558 1.301029996 0.534883721 0.102564103 0.186046512 39 2 1 40 3R:11223922-11224018 6 RpL3 FBtr0302586 11223138 11224944 GTCTTC 6mer3-8 dme-miR-7-5p 3R + 11223927 11224021 3'utr RpL3 FlyBase G31635.1 GAGGACAAGGTCAAGTGGGCTCGCGAGCATTTGGAGAAGCCCATCCAGGTCAGCAACGTCTTCGGCCAGGACGAGATGATCGACTGCGTTGGTGT 23 11223987 0.738172391 13 21 79 0.965517241 1.447158031 0.551724138 0.260869565 0.413793103 23 1 0 28 3R:11223927-11224021 6 11.5 2971 FBgn0020910 9247.463333 756.2966667 1140.143333 0.001243584 0.015205673 0.010086451 -20 -3 -11.5 0.1 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3R 11224118 11224123 + 3R_11224118_11224123_+ 0.999999994 0.999991981 0.999995988 5.66E-06 RpL3 FBtr0302586 11223138 11224944 3R + 11224093 11224143 3'utr RpL3 FlyBase G41916.1 AGGGTCTGCGCAAGGTGGCCTGTATTGGTGCCTGGCATCCGTCGCGTGTGT 10 11224118 0.724960622 7 10 61 1 1.041392685 0.272727273 0.1 0.181818182 10 0 0 11 3R:11224093-11224143 6 RpL3 FBtr0302586 11223138 11224944 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3R + 11224099 11224170 3'utr RpL3 FlyBase G31636.1 TGCGCAAGGTGGCCTGTATTGGTGCCTGGCATCCGTCGCGTGTGTCCACCACCGTGGCCCGTGCCGGTCAGA 14 11224118 0.980073277 6 12 83 0.863636364 1.278753601 0.181818182 0.428571429 0.636363636 14 3 0 19 3R:11224099-11224170 6 10 2972 FBgn0020910 9247.463333 756.2966667 1140.143333 0.001081378 0.013222325 0.008770827 0 0 0 0.1 dme-miR-988-3p 6mer2-7 CAAGGG 3R 11224598 11224603 + 3R_11224598_11224603_+ 0.999361633 0.999999933 0.999680783 0.000451346 RpL3 FBtr0302586 11223138 11224944 3R + 11224497 11224653 3'utr RpL3 FlyBase G41920.1 AAGAACAACGCCTCCACCGAGTACGATCTGACCGACAAGAGCATCACGCCCATGGGTGGCTTCCCCCACTACGGTGAGGTCAACAACGACTTCGTCATGATCAAGGGCTGCTGCATCGGCTCCAAGAAGCGCATCATCACCCTGCGCAAGTCCCTGC 53 11224594 0.902783806 16 45 251 0.859649123 1.088136089 0.210526316 0.075471698 0.140350877 53 5 3 49 3R:11224497-11224653 6 RpL3 FBtr0302586 11223138 11224944 CAAGGG 6mer2-7 dme-miR-988-3p 3R + 11224533 11224658 3'utr RpL3 FlyBase G31639.1 AAGAGCATCACGCCCATGGGTGGCTTCCCCCACTACGGTGAGGTCAACAACGACTTCGTCATGATCAAGGGCTGCTGCATCGGCTCCAAGAAGCGCATCATCACCCTGCGCAAGTCCCTGCTGAAG 27 11224594 0.827723025 9 23 121 0.853658537 0.942008053 0.56097561 0.37037037 0.585365854 27 3 3 35 3R:11224533-11224658 6 18.5 2973 FBgn0020910 9247.463333 756.2966667 1140.143333 0.002000549 0.0244613 0.01622603 4 4 4 0.1 dme-miR-980-3p 6mer2-7 GCAGCT 3R 11230719 11230724 - 3R_11230719_11230724_- 0.999999981 0.999999982 0.999999982 0 CG17187 FBtr0082365 11230615 11230808 3R - 11230701 11230738 3'utr CG17187 FlyBase G50088.1 AATTTAGCAACTATGCAGCTGATTTATAATACATTTAC 22 11230726 0.833959911 4 22 145 1 1.556302501 0 0.363636364 0.611111111 22 0 0 36 3R:11230701-11230738 6 CG17187 FBtr0082365 11230615 11230808 GCAGCT 6mer2-7 dme-miR-980-3p 3R - 11230709 11230738 3'utr CG17187 FlyBase G37874.1 AATTTAGCAACTATGCAGCTGATTTATAAT 28 11230726 0.78404609 5 28 170 1 1.62324929 0 0.321428571 0.547619048 28 0 0 42 3R:11230709-11230738 6 25 2974 FBgn0037882 159.3333333 15.59 23.78333333 0.156903766 1.603592046 1.051156272 2 2 2 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3R 11232501 11232507 - 3R_11232501_11232507_- 0.823349559 0.823349561 0.82334956 0 Arfip FBtr0082364 11232427 11233081 3R - 11232455 11232538 3'utr Arfip FlyBase G50091.1 CGAGCTTGCATAATTTGAAATCATTGTTTTACTAGTCATCGTATTATTTACACTAAAATGAAGTCTATATATATATAAAAATAT 59 11232511 0.825922262 16 53 630 0.922077922 1.851258349 0.077922078 0.271186441 0.441558442 59 6 0 71 3R:11232455-11232538 7 Arfip FBtr0082364 11232427 11233081 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R - 11232460 11232550 3'utr Arfip FlyBase G37877.1 AAACTGTTTTTGCGAGCTTGCATAATTTGAAATCATTGTTTTACTAGTCATCGTATTATTTACACTAAAATGAAGTCTATATATATATAAA 54 11232510 0.800969827 19 47 529 0.91011236 1.607455023 0.224719101 0.462962963 0.674157303 54 7 1 81 3R:11232460-11232550 7 43.5 2975 FBgn0037884 616.2333333 37.68 58.01666667 0.070590144 1.154458599 0.749784545 4 3 3.5 0.1 dme-miR-968-5p 6mer3-8 ACTACT 3R 11232764 11232769 - 3R_11232764_11232769_- 1 0.999992967 0.999996484 4.95E-06 Arfip FBtr0082364 11232427 11233081 3R - 11232724 11232783 3'utr Arfip FlyBase G50094.1 ATGTAACTCGCTGTACTACTCACATTTCCACAGCTGGTACGCTGACGTTCCTTTAACTTG 8 11232760 0.963007183 6 7 57 0.875 0.84509804 0 0 0 8 1 0 7 3R:11232724-11232783 6 Arfip FBtr0082364 11232427 11233081 ACTACT 6mer3-8 dme-miR-968-5p 3R - 11232759 11232800 3'utr Arfip FlyBase G37879.1 CAACCGCTTTCCATTGTATGTAACTCGCTGTACTACTCACAT 7 11232772 0.976346405 3 6 43 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3R:11232759-11232800 6 5.5 2976 FBgn0037884 616.2333333 37.68 58.01666667 0.008925191 0.14596603 0.094800345 -9 3 -3 0.1 dme-miR-8-3p 6mer3-8 CAGTAT 3R 11232927 11232932 - 3R_11232927_11232932_- 0.99999659 0.999996146 0.999996368 3.54E-07 Arfip FBtr0082364 11232427 11233081 3R - 11232808 11232954 3'utr Arfip FlyBase G50095.1 AAGATCGGTGGCAGAGATGATTCAGTATGCGATGCAGTGGACAGAAACACTGCATGGCGAACCATAACAATATTTTCGTGCTAAGTTTAAGTCGAATTCCTAAGCCGTAAGCAGAAAGTGAGAGTGGTAGGTGTATGTTATTTATAT 83 11232934 0.979877153 13 74 527 0.888888889 1.903089987 0.3 0.084337349 0.155555556 83 10 0 80 3R:11232808-11232954 6 Arfip FBtr0082364 11232427 11233081 CAGTAT 6mer3-8 dme-miR-8-3p 3R - 11232876 11232953 3'utr Arfip FlyBase G37880.1 AGATCGGTGGCAGAGATGATTCAGTATGCGATGCAGTGGACAGAAACACTGCATGGCGAACCATAACAATATTTTCGT 66 11232934 0.981257469 8 58 418 0.894117647 1.403692338 0.552941176 0.212121212 0.388235294 66 7 2 76 3R:11232876-11232953 6 66 2977 FBgn0037884 616.2333333 37.68 58.01666667 0.107102288 1.751592357 1.137604137 2 2 2 0.1 dme-miR-283-5p 8mer-A1 TGATATTA 3R 11240079 11240086 + 3R_11240079_11240086_+ 0.438535808 0.591390033 0.51496292 0.108084241 CG31388 FBtr0304709|FBtr0082356 11238876|11240036 11240114|11240114 3R + 11240051 11240114 3'utr CG31388 FlyBase G41936.1 AGTTGCATGTTAATTATATATACCGAATTGATATTAATAAAGCTTCCGTTCCGCGTTCATGTTT 28 11240078 0.856489537 4 26 256 0.931034483 1.431363764 0.103448276 0.035714286 0.068965517 28 2 0 27 3R:11240051-11240114 8 CG31388 FBtr0082356|FBtr0304709 11240036|11238876 11240114|11240114 TGATATTA 8mer-A1 dme-miR-283-5p 3R + 11240051 11240109 3'utr CG31388 FlyBase G31650.1 AGTTGCATGTTAATTATATATACCGAATTGATATTAATAAAGCTTCCGTTCCGCGTTCA 20 11240078 0.981645834 2 20 150 1 1.531478917 0.323529412 0.5 0.705882353 20 0 0 34 3R:11240051-11240109 8 22.5 2978 FBgn0051388 90 7.313333333 11.29666667 0.25 3.07657247 1.991737976 1 1 1 0.1 dme-miR-283-5p 7mer-m8 TGATATT 3R 11242319 11242325 - 3R_11242319_11242325_- 0.588350065 0.59105777 0.589703917 0.001914633 CG17734 FBtr0082361|FBtr0082360|FBtr0308073 11242206|11242206|11242206 11242819|11242541|11243554 3R - 11242263 11242351 3'utr CG17734 FlyBase G50101.2 CAGTTTTGTAAACCTGCGTAAGATTGTGATATTGTGTGTTTTAATGTACAAGTTGAACATCCAAACGAAAGCTGTCGAAGCAGACGACA 85 11242328 0.97097103 9 79 680 0.920353982 1.318063335 0.513274336 0.282352941 0.460176991 85 5 4 104 3R:11242263-11242351 7 CG17734 FBtr0308073|FBtr0082360|FBtr0082361 11242206|11242206|11242206 11243554|11242541|11242819 TGATATT 7mer-m8 dme-miR-283-5p 3R - 11242305 11242343 3'utr CG17734 FlyBase G37885.1 TAAACCTGCGTAAGATTGTGATATTGTGTGTTTTAATGT 47 11242328 0.702732431 7 44 389 0.914285714 1.329058719 0.428571429 0.446808511 0.628571429 47 4 2 64 3R:11242305-11242343 7 63 2979 FBgn0037890 228.3333333 38.00666667 58.52666667 0.275912409 1.657603929 1.076432395 3 3 3 0.1 dme-miR-184-3p 7mer-A1 CCGTCCA 3R 11346916 11346922 - 3R_11346916_11346922_- 0.654856234 0.745930433 0.700393333 0.064399184 KP78a FBtr0301426 11346292 11348527 3R - 11346893 11346940 5'utr KP78a FlyBase G50107.1 AATCCCAGACGTTCCGAGCCGTCCAGCATTCCACAATCTGCGATGCCC 7 11346929 0.89716536 3 7 22 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 3R:11346893-11346940 7 KP78a FBtr0301426 11346292 11348527 CCGTCCA 7mer-A1 dme-miR-184-3p 3R - 11346890 11346940 5'utr KP78a FlyBase G37889.1 AATCCCAGACGTTCCGAGCCGTCCAGCATTCCACAATCTGCGATGCCCAAG 6 11346928 0.945607173 3 6 24 1 1.041392685 0.090909091 0.333333333 0.636363636 6 0 0 11 3R:11346890-11346940 7 5.5 2980 FBgn0026064 259.0966667 6.236666667 9.53 0.021227598 0.881881347 0.577124869 7 6 6.5 0.1 dme-miR-184-5p 6mer3-8 TGATAA 3R 11348467 11348472 - 3R_11348467_11348472_- 1 1 1 0 KP78a FBtr0301426 11346292 11348527 3R - 11348429 11348519 5'utr KP78a FlyBase G50109.1 CGGGTTGTTTGGGGCAATGTCAAGGTGATAGAGATAGAATGATAGAGTGATAAAGAAAGTGATACAGTCGGCCCTGACCGAGCATTCTAAC 42 11348445 0.962122559 11 34 173 0.803921569 1.135662602 0.215686275 0.214285714 0.352941176 42 8 2 41 3R:11348429-11348519 6 KP78a FBtr0301426 11346292 11348527 TGATAA 6mer3-8 dme-miR-184-5p 3R - 11348434 11348509 5'utr KP78a FlyBase G37890.1 GGGGCAATGTCAAGGTGATAGAGATAGAATGATAGAGTGATAAAGAAAGTGATACAGTCGGCCCTGACCGAGCATT 40 11348474 0.96677576 9 30 159 0.803278689 1.213074825 0.295081967 0.4 0.606557377 40 10 2 49 3R:11348434-11348509 6 28 2981 FBgn0026064 259.0966667 6.236666667 9.53 0.108067774 4.489577766 2.938090241 -27 2 -12.5 0.1 "dme-miR-995-3p,dme-miR-998-3p" 6mer2-7 GGTGCT 3R 11433335 11433340 + 3R_11433335_11433340_+ 0.999964281 0.884876906 0.942420594 0.081379081 CG5276 FBtr0082390|FBtr0339375 11433291|11433291 11433543|11433543 3R + 11433308 11433352 3'utr CG5276 FlyBase G41994.1 TACCGCACTCCACTCTACTTCGATCCAGGTGCTTCAGTTTTAAAC 11 11433341 0.728153576 5 11 77 1 1.113943352 0.615384615 0.090909091 0.230769231 11 0 0 13 3R:11433308-11433352 6 CG5276 FBtr0082390|FBtr0339375 11433291|11433291 11433543|11433543 GGTGCT 6mer2-7 "dme-miR-995-3p,dme-miR-998-3p" 3R + 11433324 11433352 3'utr CG5276 FlyBase G31684.1 ACTTCGATCCAGGTGCTTCAGTTTTAAAC 5 11433341 0.75996981 2 5 32 1 0.84509804 0.571428571 0.4 0.571428571 5 0 0 7 3R:11433324-11433352 6 8 2982 FBgn0037900 117.3333333 8.9 13.58333333 0.068181818 0.898876404 0.588957055 -6 -6 -6 0.1 dme-miR-184-5p 8mer-m1 TGATAAGG 3R 11465776 11465783 + 3R_11465776_11465783_+ 0.614694148 0.614702039 0.614698093 5.59E-06 CG17230 FBtr0339376 11465566 11467372 3R + 11465758 11465812 3'utr CG17230 FlyBase G41998.1 ACTATGTGCACTTGTAGTTGATAAGGCTGATAGATAGGCGCACCCCCCTACCCCC 134 11465779 0.864715658 4 129 891 0.966442953 2.158362492 0.167785235 0.089552239 0.181208054 134 5 0 144 3R:11465758-11465812 8 CG17230 FBtr0339376 11465566 11467372 TGATAAGG 8mer-m1 dme-miR-184-5p 3R + 11465748 11465807 3'utr CG17230 FlyBase G31687.1 AGCGAACACCACTATGTGCACTTGTAGTTGATAAGGCTGATAGATAGGCGCACCCCCCTA 85 11465779 0.856076045 5 81 552 0.96350365 2.120573931 0.328467153 0.423529412 0.642335766 85 5 0 132 3R:11465748-11465807 8 106.5 2983 FBgn0046225 82.24 4.006666667 6.103333333 1.294990272 26.58069884 17.44948116 -3 -3 -3 0.1 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 11466578 11466585 + 3R_11466578_11466585_+ 0.631129749 0.63112297 0.631126359 4.74E-06 CG17230 FBtr0339376 11465566 11467372 3R + 11466561 11466601 3'utr CG17230 FlyBase G41999.1 TGATATCTGCATTTGTTTCCGTCCAGAGTCGAGCCATCGAA 38 11466577 0.71232571 2 37 301 0.975609756 1.602059991 0.097560976 0.078947368 0.146341463 38 1 0 40 3R:11466561-11466601 8 CG17230 FBtr0339376 11465566 11467372 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R + 11466562 11466597 3'utr CG17230 FlyBase G31688.1 GATATCTGCATTTGTTTCCGTCCAGAGTCGAGCCAT 14 11466577 0.700897143 2 14 113 1 1.322219295 0.142857143 0.5 0.666666667 14 0 0 21 3R:11466562-11466597 8 26 2984 FBgn0046225 82.24 4.006666667 6.103333333 0.31614786 6.489184692 4.259967231 1 1 1 0.1 dme-miR-92b-3p 7mer-A1 TGCAATA 3R 11560055 11560061 - 3R_11560055_11560061_- 0.757867951 0.780998875 0.769433413 0.016356016 sea FBtr0100462|FBtr0100465|FBtr0100461|FBtr0100464 11559894|11559894|11559894|11559894 11560164|11560164|11560164|11560164 3R - 11559961 11560111 3'utr sea FlyBase G50134.1 AAACCCACTCGTGCATTTTCCTCTGTTCCCATTGTTCCCTAGTCGACTGTTGCAATAGTTTCTAGTTTTGTGACATATTCCAAGAAAGCATTTTATATACACTCTATACCCGCAATGGGTAAGTGGCTATAGAAATTATACAGCTTGTTTT 43 11560062 0.985722729 20 43 362 1 1.707570176 0.176470588 0.186046512 0.31372549 43 0 0 51 3R:11559961-11560111 7 sea FBtr0100461|FBtr0100464|FBtr0100462|FBtr0100465 11559894|11559894|11559894|11559894 11560164|11560164|11560164|11560164 TGCAATA 7mer-A1 dme-miR-92b-3p 3R - 11560028 11560114 3'utr sea FlyBase G37915.1 AAAAAACCCACTCGTGCATTTTCCTCTGTTCCCATTGTTCCCTAGTCGACTGTTGCAATAGTTTCTAGTTTTGTGACATATTCCAAG 20 11560062 0.988905702 10 18 173 0.923076923 1.380211242 0.115384615 0.3 0.461538462 20 2 0 24 3R:11560028-11560114 7 20 2985 FBgn0037912 356.1766667 26.12 39.85 0.05615191 0.765696784 0.501882058 1 1 1 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 11575748 11575753 + 3R_11575748_11575753_+ 0.99707121 0.995081884 0.996076547 0.001406648 Mrp4 FBtr0302027 11575669 11575937 3R + 11575633 11575845 lincRNA_intron-lincRNA_exon Mrp4 FlyBase G42027.1 AGGCTCATTTGGAATCAATGAAACCGAAATCGGAGTAGATTAAGCATCTGGTTATTGGTTACTAAACTGGGAGCCAACAAGGTCTCATTTCCTGGCTGTAAGCGTCTTCAAAGTTGTACCTAATCCAGTCAGCTGCATTTAAGCTAGTTTTCTACTTAAAGTATTATGCCTTCGAACCGTACATACTTGTATAACTCAATCCTTATAGATATA 573 11575724 0.838123886 37 543 4331 0.951145038 2.016336796 0.198473282 0.115183246 0.225954198 573 27 5 623 3R:11575633-11575845 6 Mrp4 FBtr0302027 11575669 11575937 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 11575633 11575849 lincRNA_intron-lincRNA_exon Mrp4 FlyBase G31713.1 AGGCTCATTTGGAATCAATGAAACCGAAATCGGAGTAGATTAAGCATCTGGTTATTGGTTACTAAACTGGGAGCCAACAAGGTCTCATTTCCTGGCTGTAAGCGTCTTCAAAGTTGTACCTAATCCAGTCAGCTGCATTTAAGCTAGTTTTCTACTTAAAGTATTATGCCTTCGAACCGTACATACTTGTATAACTCAATCCTTATAGATATACTAT 380 11575724 0.765042843 42 364 2866 0.955035971 2.424064525 0.284172662 0.339473684 0.548561151 380 24 1 531 3R:11575633-11575849 6 173 2986 FBgn0263316 1433.733333 36.35333333 55.55 0.120664001 4.75884834 3.114311431 24 24 24 0.1 dme-miR-92b-3p 6mer2-7 TGCAAT 3R 11584842 11584847 + 3R_11584842_11584847_+ 0.999922439 0.999999988 0.999961214 5.49E-05 wkd FBtr0082413|FBtr0082414 11584642|11584642 11585305|11585305 3R + 11584809 11584867 3'utr wkd FlyBase G42036.1 AGTTGGTCAGTCAATTACGGAGACATCATTCCATGCAATCAGTTTGCTAATTTTAAGAC 10 11584837 0.972611558 4 9 59 1 1 0 0 0 10 0 0 10 3R:11584809-11584867 6 wkd FBtr0082413|FBtr0082414 11584642|11584642 11585305|11585305 TGCAAT 6mer2-7 dme-miR-92b-3p 3R + 11584825 11584860 3'utr wkd FlyBase G31717.1 ACGGAGACATCATTCCATGCAATCAGTTTGCTAATT 7 11584838 0.715576098 3 7 46 1 1 0 0.285714286 0.5 7 0 0 10 3R:11584825-11584860 6 7.5 2987 FBgn0037917 354.31 20.74 31.50666667 0.021167904 0.361620058 0.238044858 5 4 4.5 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 11585088 11585094 + 3R_11585088_11585094_+ 0.658983278 0.658991335 0.658987306 5.66E-06 wkd FBtr0082413|FBtr0082414 11584642|11584642 11585305|11585305 3R + 11585004 11585227 3'utr wkd FlyBase G42038.1 GCGTAACATTTAAAACCGTAGCGTTAGCTTTGAGTTGAGGACCCCGAACATATCGTATGATTATCATGATGATTACCACCCTGAGGCAGCTGACACAAGGACTGGAGGATTATATAGTTTGAAACTTTGACTACTTTATCCGTATTAACTCTGAGACGAGAATGTTGATATTTACCTACGATAATGCGTTACGAACGACTTCTGTTGTGCCCCCGAGCCTGAAA 160 11585085 0.975565849 39 149 925 0.943589744 1.787696568 0.143589744 0.16875 0.317948718 160 9 2 184 3R:11585004-11585227 7 wkd FBtr0082413|FBtr0082414 11584642|11584642 11585305|11585305 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 11585004 11585179 3'utr wkd FlyBase G31719.1 GCGTAACATTTAAAACCGTAGCGTTAGCTTTGAGTTGAGGACCCCGAACATATCGTATGATTATCATGATGATTACCACCCTGAGGCAGCTGACACAAGGACTGGAGGATTATATAGTTTGAAACTTTGACTACTTTATCCGTATTAACTCTGAGACGAGAATGTTGATATTTACC 144 11585085 0.837263679 27 130 815 0.928571429 1.444936571 0.19047619 0.326388889 0.538095238 144 9 6 195 3R:11585004-11585179 7 62 2988 FBgn0037917 354.31 20.74 31.50666667 0.174988005 2.989392478 1.967837495 3 3 3 0.1 dme-miR-2a-2-5p 7mer-A1 GATGAGA 3R 11590896 11590902 - 3R_11590896_11590902_- 0.665278323 0.291974792 0.478626557 0.263965436 Jupiter FBtr0082455|FBtr0082453|FBtr0082457|FBtr0082456|FBtr0335232|FBtr0082452|FBtr0082454 11590384|11590384|11590384|11590384|11590384|11590384|11590384 11591167|11591167|11591167|11591167|11591167|11591167|11591167 3R - 11590601 11590999 3'utr Jupiter FlyBase G50177.3 AGGCACGAAAGTAGGACATGATGGCCAACGAATAATTAAGCGAGAGAATAGCAATTGCTCAACGATCTGCAGATGCAATAGTACGATACGCTTCCCAGATGAGAATTAATCAACCAATTTTAGAAGGCGGCGTTGCACCCAAACCTATCACTACCAACACCACCACCACCCCATTGCAAATCTGTAATTTAAATTCCTTAGTTGGTGTAAATCCATGTAACGCGTGTAGCCCCACAAAACGACGCCCGATCGCCTGCCCTCTGCAACTGCAGATATATTATATATATGATATTCATCAACCCGGTGTGTGCTTACGTGTGAAGCAAGCGAGAAGCAAGGATGCGAGCGGTGGCGGCCTGTTGGAGTCCTTTGATCACACATGGATTTTATTTTAGTTGC 316 11590900 0.952543803 59 289 1639 0.934210526 1.705130313 0.178947368 0.158227848 0.3 316 19 6 355 3R:11590601-11590999 7 Jupiter FBtr0082456|FBtr0082457|FBtr0082453|FBtr0082455|FBtr0082454|FBtr0082452|FBtr0335232 11590384|11590384|11590384|11590384|11590384|11590384|11590384 11591167|11591167|11591167|11591167|11591167|11591167|11591167 GATGAGA 7mer-A1 dme-miR-2a-2-5p 3R - 11590598 11591003 3'utr Jupiter FlyBase G37948.2 CGAAAGGCACGAAAGTAGGACATGATGGCCAACGAATAATTAAGCGAGAGAATAGCAATTGCTCAACGATCTGCAGATGCAATAGTACGATACGCTTCCCAGATGAGAATTAATCAACCAATTTTAGAAGGCGGCGTTGCACCCAAACCTATCACTACCAACACCACCACCACCCCATTGCAAATCTGTAATTTAAATTCCTTAGTTGGTGTAAATCCATGTAACGCGTGTAGCCCCACAAAACGACGCCCGATCGCCTGCCCTCTGCAACTGCAGATATATTATATATATGATATTCATCAACCCGGTGTGTGCTTACGTGTGAAGCAAGCGAGAAGCAAGGATGCGAGCGGTGGCGGCCTGTTGGAGTCCTTTGATCACACATGGATTTTATTTTAGTTGCTAC 210 11590900 0.973257599 53 187 1136 0.897435897 1.669006781 0.169871795 0.333333333 0.551282051 210 27 5 280 3R:11590598-11591003 7 47 2989 FBgn0051363 4223.186667 342.4766667 526.7266667 0.011129037 0.137235627 0.089230341 -2 -2 -2 0.1 dme-miR-995-5p 6mer2-7 ATTCGG 3R 11633775 11633780 - 3R_11633775_11633780_- 0.99986036 0.999853038 0.999856699 5.23E-06 Csk FBtr0299728|FBtr0299729|FBtr0300549|FBtr0335449|FBtr0300547|FBtr0300546|FBtr0300548 11633276|11633276|11633276|11633276|11633276|11633276|11633276 11634819|11634819|11634819|11634819|11634819|11634819|11634819 3R - 11633679 11633800 3'utr Csk FlyBase G50193.1 AGTTCGTGGATTTGTTCATTATTCGGTCCATTCTTCTAACAAGGAATCTCCTTCTCTGTACTTTAATCGAACCCATCCAATGCATCTGGCGGCAAGGCAAAGGAAAATTGTAATTTATTTTT 106 11633779 0.890625827 10 105 1057 0.991525424 2.068185862 0.279661017 0.113207547 0.203389831 106 1 0 117 3R:11633679-11633800 6 Csk FBtr0300546|FBtr0300548|FBtr0335449|FBtr0300547|FBtr0299729|FBtr0300549|FBtr0299728 11633276|11633276|11633276|11633276|11633276|11633276|11633276 11634819|11634819|11634819|11634819|11634819|11634819|11634819 ATTCGG 6mer2-7 dme-miR-995-5p 3R - 11633676 11633801 3'utr Csk FlyBase G37962.1 AAGTTCGTGGATTTGTTCATTATTCGGTCCATTCTTCTAACAAGGAATCTCCTTCTCTGTACTTTAATCGAACCCATCCAATGCATCTGGCGGCAAGGCAAAGGAAAATTGTAATTTATTTTTTAA 78 11633779 0.84016015 11 76 760 0.983471074 2.075546961 0.272727273 0.41025641 0.619834711 78 2 0 119 3R:11633676-11633801 6 67 2990 FBgn0262081 3599.453333 94.44666667 145.5866667 0.018613938 0.709395073 0.460206979 -1 -1 -1 0.1 dme-miR-277-3p 6mer3-8 TGCATT 3R 11633900 11633905 - 3R_11633900_11633905_- 0.75769515 0.999208317 0.878451734 0.170775551 Csk FBtr0299728|FBtr0299729|FBtr0300549|FBtr0335449|FBtr0300547|FBtr0300546|FBtr0300548 11633276|11633276|11633276|11633276|11633276|11633276|11633276 11634819|11634819|11634819|11634819|11634819|11634819|11634819 3R - 11633827 11633937 3'utr Csk FlyBase G50194.1 AAACGAAAAAGAGAAAAACACTTGTGAAAATATGCATTACATTAAAACGTCTACATATACATAATACAATACACATTACCTACGTATTTAGCTTATAAATCGATTAATAAT 54 11633916 0.972678928 10 52 316 0.951612903 1.469822016 0.209677419 0.148148148 0.258064516 54 2 1 59 3R:11633827-11633937 6 Csk FBtr0300546|FBtr0300548|FBtr0335449|FBtr0300547|FBtr0299729|FBtr0300549|FBtr0299728 11633276|11633276|11633276|11633276|11633276|11633276|11633276 11634819|11634819|11634819|11634819|11634819|11634819|11634819 TGCATT 6mer3-8 dme-miR-277-3p 3R - 11633888 11633972 3'utr Csk FlyBase G37963.1 GGCGGCTGATAGGCTGCGTGTCCTTAAACTCAAGAAAACGAAAAAGAGAAAAACACTTGTGAAAATATGCATTACATTAAAACGT 36 11633915 0.9183125 8 33 130 0.979166667 1.672097858 0.166666667 0.25 0.4375 36 1 0 47 3R:11633888-11633972 6 14 2991 FBgn0262081 3599.453333 94.44666667 145.5866667 0.00388948 0.148231806 0.096162652 11 10 10.5 0.1 dme-miR-968-5p 6mer3-8 ACTACT 3R 11634435 11634440 - 3R_11634435_11634440_- 0.971693269 0.694523631 0.83310845 0.195988574 Csk FBtr0299728|FBtr0299729|FBtr0300549|FBtr0335449|FBtr0300547|FBtr0300546|FBtr0300548 11633276|11633276|11633276|11633276|11633276|11633276|11633276 11634819|11634819|11634819|11634819|11634819|11634819|11634819 3R - 11634397 11634445 3'utr Csk FlyBase G50199.1 CTACTACTACTACCTTTAACTACCTACCACAATATTATGTTATGTGTAC 6 11634429 0.975437918 6 6 40 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 3R:11634397-11634445 6 Csk FBtr0300546|FBtr0300548|FBtr0335449|FBtr0300547|FBtr0299729|FBtr0300549|FBtr0299728 11633276|11633276|11633276|11633276|11633276|11633276|11633276 11634819|11634819|11634819|11634819|11634819|11634819|11634819 ACTACT 6mer3-8 dme-miR-968-5p 3R - 11634347 11634443 3'utr Csk FlyBase G37966.1 ACTACTACTACCTTTAACTACCTACCACAATATTATGTTATGTGTACACTTAACCATAGCTATTTATTAGTTAACTTCTCGGTTCGGACTCCACTGT 9 11634429 0.983923819 7 9 74 1 1.176091259 0.133333333 0.444444444 0.666666667 9 0 0 15 3R:11634347-11634443 6 5 2992 FBgn0262081 3599.453333 94.44666667 145.5866667 0.0013891 0.052939931 0.034343804 -11 -11 -11 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 11673703 11673709 + 3R_11673703_11673709_+ 0.788714855 0.793630713 0.791172784 0.003475996 CG42327 FBtr0299789|FBtr0299789|FBtr0299789 11673461|11673461|11673461 11673974|11673974|11673974 3R + 11673690 11673720 3'utr CG42327 FlyBase G42072.1 ATTCCTTTATTATTGTGATATAATCGTACAT 9 11673702 0.680148299 2 9 97 1 1.079181246 0 0.222222222 0.416666667 9 0 0 12 3R:11673690-11673720 7 CG42327 FBtr0299789|FBtr0299789|FBtr0299789 11673461|11673461|11673461 11673974|11673974|11673974 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 11673686 11673721 3'utr CG42327 FlyBase G31753.1 ATGTATTCCTTTATTATTGTGATATAATCGTACATT 12 11673702 0.689120412 4 11 137 0.9 1.255272505 0.15 0.5 0.7 12 2 0 18 3R:11673686-11673721 7 10.5 2993 FBgn0259227 1487.13 32.72666667 50.52333333 0.00706058 0.320839275 0.207824767 1 1 1 0.1 dme-miR-184-5p 6mer3-8 TGATAA 3R 11743989 11743994 + 3R_11743989_11743994_+ 1 1 1 0 CG14722 FBtr0082431 11743724 11744027 3R + 11743979 11744016 3'utr CG14722 FlyBase G42095.1 GAAATGTTATTGATAATAGAACTGATTTAAAATAAAAT 11 11743990 0.690436529 5 11 85 1 1.113943352 0 0.181818182 0.307692308 11 0 0 13 3R:11743979-11744016 6 CG14722 FBtr0082431 11743724 11744027 TGATAA 6mer3-8 dme-miR-184-5p 3R + 11743934 11744017 3'utr CG14722 FlyBase G31775.1 AATCCCTAATATGTTGGACGAAGATTTTACACAAAGTTTCACAATGAAATGTTATTGATAATAGAACTGATTTAAAATAAAATA 17 11743992 0.984957361 10 16 123 0.958333333 1.361727836 0.166666667 0.352941176 0.541666667 17 1 0 23 3R:11743934-11744017 6 11.5 2994 FBgn0037943 542.9533333 32.08666667 49.30666667 0.021180457 0.358404322 0.233234181 -1 -3 -2 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 11744632 11744638 - 3R_11744632_11744638_- 0.708669135 0.795959355 0.752314245 0.061723563 CG6923 FBtr0330169|FBtr0330169|FBtr0330169|FBtr0082433|FBtr0082433|FBtr0082433|FBtr0082432|FBtr0082432|FBtr0082432|FBtr0307892|FBtr0307892|FBtr0307892 11744481|11744481|11744481|11744481|11744481|11744481|11744227|11744227|11744227|11744481|11744481|11744481 11744911|11744911|11744911|11744938|11744938|11744938|11744938|11744938|11744938|11744938|11744938|11744938 3R - 11744625 11744649 3'utr CG6923 FlyBase G50234.1 AACAAAATTCTTGTGATAAGAATTT 5 11744638 0.628718048 2 4 32 1 0.698970004 0 0 0 5 0 0 5 3R:11744625-11744649 7 CG6923 FBtr0082432|FBtr0082432|FBtr0082432|FBtr0307892|FBtr0307892|FBtr0307892|FBtr0330169|FBtr0330169|FBtr0330169|FBtr0082433|FBtr0082433|FBtr0082433 11744227|11744227|11744227|11744481|11744481|11744481|11744481|11744481|11744481|11744481|11744481|11744481 11744938|11744938|11744938|11744938|11744938|11744938|11744911|11744911|11744911|11744938|11744938|11744938 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 11744626 11744714 3'utr CG6923 FlyBase G37989.1 AAGTATATTAAGTGATTCGGCAAATAATTTCCTATACATATGTACAAATTGTCTACGTTTTGTGAAACAAAATTCTTGTGATAAGAATT 12 11744640 0.989360084 8 9 86 0.8125 1.113943352 0.125 0.333333333 0.5 12 3 0 13 3R:11744626-11744714 7 4 2995 FBgn0037944 206.3266667 5.293333333 8.143333333 0.019386733 0.755667506 0.491199345 0 2 1 0.1 dme-miR-14-3p 7mer-A1 AGACTGA 3R 11744898 11744904 - 3R_11744898_11744904_- 0.823348725 0.823348655 0.82334869 0 CG6923 FBtr0330169|FBtr0082433|FBtr0082432|FBtr0307892 11744481|11744481|11744227|11744481 11744911|11744938|11744938|11744938 3R - 11744883 11744936 stop_codon CG6923 FlyBase G50237.1 TTGTGTGCACGGCATCTTTATGTAAATCCCTCAGACTGAGTTTGTTCTCGGCAT 49 11744906 0.982589196 7 42 319 0.842105263 0.903089987 0.087719298 0.12244898 0.245614035 49 4 5 48 3R:11744883-11744936 7 CG6923 FBtr0082432|FBtr0307892|FBtr0330169|FBtr0082433 11744227|11744481|11744481|11744481 11744938|11744938|11744911|11744938 AGACTGA 7mer-A1 dme-miR-14-3p 3R - 11744883 11744917 stop_codon CG6923 FlyBase G37990.1 ATGTAAATCCCTCAGACTGAGTTTGTTCTCGGCAT 24 11744906 0.868775497 3 24 139 1 1.491361694 0.032258065 0.25 0.419354839 24 0 0 31 3R:11744883-11744917 7 35.5 2996 FBgn0037944 206.3266667 5.293333333 8.143333333 0.172057255 6.706549118 4.359394187 2 2 2 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 11751836 11751842 - 3R_11751836_11751842_- 0.751798057 0.71511034 0.733454198 0.025942192 Lk6 FBtr0082534|FBtr0082534|FBtr0082534 11750929|11750929|11750929 11752971|11752971|11752971 3R - 11751712 11751867 3'utr Lk6 FlyBase G50256.1 CATACACCTATAATATTTAAAAAATTGTGATATAAAATGTAAATGTAAATGCACCTGAAGAAATCTATCTATCAAATGACGCTGTGCCATCAACAACCACTTCAATCTACTGATAAGAGGAGTATCATTTTCCACAGACCTTATTTGTTTACGTCC 80 11751843 0.981087449 18 76 625 0.955555556 1.457377197 0.022222222 0.1125 0.211111111 80 2 2 86 3R:11751712-11751867 7 Lk6 FBtr0082534|FBtr0082534|FBtr0082534 11750929|11750929|11750929 11752971|11752971|11752971 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 11751745 11751861 3'utr Lk6 FlyBase G37998.1 CCTATAATATTTAAAAAATTGTGATATAAAATGTAAATGTAAATGCACCTGAAGAAATCTATCTATCAAATGACGCTGTGCCATCAACAACCACTTCAATCTACTGATAAGAGGAGT 68 11751843 0.985836117 13 63 524 0.926315789 1.467361417 0 0.308823529 0.505263158 68 5 2 88 3R:11751745-11751861 7 55 2997 FBgn0017581 12415.55667 253.5666667 388.6133333 0.004429926 0.216905482 0.141528855 1 1 1 0.1 dme-miR-965-3p 6mer3-8 TACGCT 3R 11752657 11752662 - 3R_11752657_11752662_- 0.999549742 0.999995314 0.999772528 0.000315087 Lk6 FBtr0082535|FBtr0082534 11752383|11750929 11752971|11752971 3R - 11752583 11752749 5'utr Lk6 FlyBase G50261.2 AATAAAATGATGAATACTTGTGGTAGGAGAAAGCGACTGCGAAGTGAAACCAACTGAAACCGAGGGAAATTGAGAGTGGCAATAGTCTACGCTGTTTTGAAGCAAGCCAAACAGTCGTTCGAGATGAAAACAACAGAAAACAAATACCTTTTTTTATAAAAAAGATT 143 11752679 0.933857177 24 135 603 0.95625 2.184691431 0.20625 0.097902098 0.19375 143 7 0 153 3R:11752583-11752749 6 Lk6 FBtr0082535|FBtr0082534 11752383|11750929 11752971|11752971 TACGCT 6mer3-8 dme-miR-965-3p 3R - 11752593 11752749 5'utr Lk6 FlyBase G38001.1 AATAAAATGATGAATACTTGTGGTAGGAGAAAGCGACTGCGAAGTGAAACCAACTGAAACCGAGGGAAATTGAGAGTGGCAATAGTCTACGCTGTTTTGAAGCAAGCCAAACAGTCGTTCGAGATGAAAACAACAGAAAACAAATACCTTTTTTTAT 79 11752679 0.957815727 20 74 345 0.95 1.755874856 0.283333333 0.417721519 0.616666667 79 5 1 114 3R:11752593-11752749 6 23 2998 FBgn0017581 12415.55667 253.5666667 388.6133333 0.001852515 0.090705929 0.059184794 17 17 17 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 11781567 11781572 - 3R_11781567_11781572_- 0.456627569 0.512940511 0.48478404 0.039819233 CG17360 FBtr0082531|FBtr0333819 11781129|11781129 11781819|11781819 3R - 11781519 11781658 3'utr CG17360 FlyBase G50296.1 TGCGTGCCTCCGCTTGACTCATTCATTCGTTTGCGCTTAGTAACATCTCATTTGAATAATTTTTGTGATATTAAACTTAAAGTCGCTGATCTTTGGTATGCTCTTTTGTAGGATATTTAGTTTCTATTGATTTTCTACAT 167 11781597 0.910691985 30 153 1641 0.909090909 1.67669361 0.224880383 0.221556886 0.377990431 167 16 3 190 3R:11781519-11781658 6 CG17360 FBtr0333819|FBtr0082531 11781129|11781129 11781819|11781819 TGATCT 6mer3-8 dme-bantam-3p 3R - 11781530 11781663 3'utr CG17360 FlyBase G38028.1 TGTAATGCGTGCCTCCGCTTGACTCATTCATTCGTTTGCGCTTAGTAACATCTCATTTGAATAATTTTTGTGATATTAAACTTAAAGTCGCTGATCTTTGGTATGCTCTTTTGTAGGATATTTAGTTTCTATTG 100 11781597 0.746402167 24 91 974 0.919708029 2.100370545 0.116788321 0.29 0.481751825 100 11 0 126 3R:11781530-11781663 6 41.5 2999 FBgn0037949 382.3133333 8.926666667 13.76333333 0.108549706 4.648991785 3.015257932 25 25 25 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 11781589 11781595 - 3R_11781589_11781595_- 0.689201966 0.664998721 0.677100343 0.017114318 CG17360 FBtr0082531|FBtr0082531|FBtr0082531|FBtr0333819|FBtr0333819|FBtr0333819 11781129|11781129|11781129|11781129|11781129|11781129 11781819|11781819|11781819|11781819|11781819|11781819 3R - 11781519 11781658 3'utr CG17360 FlyBase G50296.1 TGCGTGCCTCCGCTTGACTCATTCATTCGTTTGCGCTTAGTAACATCTCATTTGAATAATTTTTGTGATATTAAACTTAAAGTCGCTGATCTTTGGTATGCTCTTTTGTAGGATATTTAGTTTCTATTGATTTTCTACAT 167 11781597 0.910691985 30 153 1641 0.909090909 1.67669361 0.224880383 0.221556886 0.377990431 167 16 3 190 3R:11781519-11781658 7 CG17360 FBtr0333819|FBtr0333819|FBtr0333819|FBtr0082531|FBtr0082531|FBtr0082531 11781129|11781129|11781129|11781129|11781129|11781129 11781819|11781819|11781819|11781819|11781819|11781819 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 11781530 11781663 3'utr CG17360 FlyBase G38028.1 TGTAATGCGTGCCTCCGCTTGACTCATTCATTCGTTTGCGCTTAGTAACATCTCATTTGAATAATTTTTGTGATATTAAACTTAAAGTCGCTGATCTTTGGTATGCTCTTTTGTAGGATATTTAGTTTCTATTG 100 11781597 0.746402167 24 91 974 0.919708029 2.100370545 0.116788321 0.29 0.481751825 100 11 0 126 3R:11781530-11781663 7 49.5 3000 FBgn0037949 382.3133333 8.926666667 13.76333333 0.129474951 5.545182972 3.596512473 2 2 2 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 3R 11789463 11789470 - 3R_11789463_11789470_- 0.643551255 0.643562644 0.64355695 7.99E-06 Sbf FBtr0082529|FBtr0082530 11789291|11789291 11789928|11789928 3R - 11789369 11789492 3'utr Sbf FlyBase G50302.1 TATATAGGTTTATAGTGAATTTACCAAAGAATATTCCACCTTTGTTGCGCAATTGAAATGCATTTCTTGATTGCTTCCTTTAAACTAAACCCTATTATTAAACGCTTTCCTTTATTTATACACT 131 11789441 0.874316674 18 123 1075 0.953333333 1.854306042 0.326666667 0.106870229 0.22 131 6 1 143 3R:11789369-11789492 8 Sbf FBtr0082529|FBtr0082530 11789291|11789291 11789928|11789928 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 11789403 11789493 3'utr Sbf FlyBase G38031.1 CTATATAGGTTTATAGTGAATTTACCAAAGAATATTCCACCTTTGTTGCGCAATTGAAATGCATTTCTTGATTGCTTCCTTTAAACTAAAC 64 11789471 0.852379275 16 64 514 1 1.934498451 0.197674419 0.234375 0.430232558 64 0 0 86 3R:11789403-11789493 8 49.5 3001 FBgn0025802 636.01 11.3 17.24 0.077828965 4.380530973 2.871229698 -29 1 -14 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3R 11789607 11789613 - 3R_11789607_11789613_- 0.442663134 0.269955824 0.356309479 0.122122503 Sbf FBtr0082529|FBtr0082530 11789291|11789291 11789928|11789928 3R - 11789545 11789635 3'utr Sbf FlyBase G50303.1 ATGTAAAGAAACTATAAAATTATGTGATTATATAAACAAACAAAAATCAGACTATGATAAATTTACGATAAAATGGAAAAGCCACGCCCGC 27 11789616 0.976840609 9 26 167 0.966666667 1.462397998 0.033333333 0.111111111 0.2 27 1 0 29 3R:11789545-11789635 7 Sbf FBtr0082529|FBtr0082530 11789291|11789291 11789928|11789928 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 11789562 11789624 3'utr Sbf FlyBase G38032.1 CTATAAAATTATGTGATTATATAAACAAACAAAAATCAGACTATGATAAATTTACGATAAAAT 14 11789589 0.979362188 7 12 83 0.913043478 1.322219295 0 0.5 0.695652174 14 2 0 21 3R:11789562-11789624 7 11 3002 FBgn0025802 636.01 11.3 17.24 0.017295326 0.973451327 0.638051044 3 -24 -10.5 0.1 dme-miR-283-5p 7mer-A1 GATATTA 3R 11893797 11893803 - 3R_11893797_11893803_- 0.774152887 0.771341149 0.772747018 0.001988243 Cad87A FBtr0082513 11893510 11894247 3R - 11893766 11893858 3'utr Cad87A FlyBase G50372.1 AATGTACATCTACAATGGCATCTACACAATGCAGTCTTTACTCGAAAACTTCCGCGATATTAGTTTTAATGGCGATCCAAATCGTCTACAGCT 145 11893808 0.988789077 9 139 1321 0.961038961 2.170261715 0.331168831 0.062068966 0.116883117 145 6 0 148 3R:11893766-11893858 7 Cad87A FBtr0082513 11893510 11894247 GATATTA 7mer-A1 dme-miR-283-5p 3R - 11893767 11893856 3'utr Cad87A FlyBase G38074.1 TGTACATCTACAATGGCATCTACACAATGCAGTCTTTACTCGAAAACTTCCGCGATATTAGTTTTAATGGCGATCCAAATCGTCTACAGC 81 11893808 0.988383586 9 74 694 0.8984375 1.458637849 0.375 0.432098765 0.640625 81 10 3 115 3R:11893767-11893856 7 108 3003 FBgn0037963 524.8733333 8.663333333 13.23333333 0.20576393 12.46633321 8.161209068 5 5 5 0.1 dme-miR-184-3p 6mer3-8 TCCGTC 3R 11964883 11964888 - 3R_11964883_11964888_- 0.978111957 0.988039417 0.983075687 0.007019732 CG12213 FBtr0334155|FBtr0113223|FBtr0334156 11964672|11964672|11964672 11965424|11965424|11965424 3R - 11964818 11964912 3'utr CG12213 FlyBase G50393.1 ACGTTTCACTTCTGCATTTGCAATTCCGTCAACCCATTTCGCTAGAGATTAGGTAGCTACATAAGATAGGAGTGTACGCTAGCATTCGAAAACAC 158 11964889 0.803984064 14 154 1113 0.969230769 2.276461804 0.087179487 0.164556962 0.323076923 158 6 0 189 3R:11964818-11964912 6 CG12213 FBtr0334156|FBtr0113223|FBtr0334155 11964672|11964672|11964672 11965424|11965424|11965424 TCCGTC 6mer3-8 dme-miR-184-3p 3R - 11964867 11964911 3'utr CG12213 FlyBase G38087.1 CGTTTCACTTCTGCATTTGCAATTCCGTCAACCCATTTCGCTAGA 83 11964889 0.806439199 2 79 560 0.955752212 1.73239376 0.159292035 0.289156627 0.477876106 83 4 1 108 3R:11964867-11964911 6 113 3004 FBgn0260742 1391.876667 80.28333333 122.6666667 0.081185354 1.407515051 0.921195652 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 11964971 11964978 - 3R_11964971_11964978_- 0.65016308 0.650161347 0.650162213 1.27E-06 CG12213 FBtr0334155|FBtr0334155|FBtr0334155|FBtr0113223|FBtr0113223|FBtr0113223|FBtr0334156|FBtr0334156|FBtr0334156 11964672|11964672|11964672|11964672|11964672|11964672|11964672|11964672|11964672 11965424|11965424|11965424|11965424|11965424|11965424|11965424|11965424|11965424 3R - 11964929 11965003 3'utr CG12213 FlyBase G50394.1 AAATATACTCTATATACTTGGTTTTCTGTGATAAAAATAAACGCTGCGCTGCATTTGGGCAATGTTGCCTGTTTT 304 11964980 0.709617965 17 279 2986 0.915068493 1.62065648 0.046575342 0.151315789 0.293150685 304 24 7 334 3R:11964929-11965003 8 CG12213 FBtr0334156|FBtr0334156|FBtr0334156|FBtr0113223|FBtr0113223|FBtr0113223|FBtr0334155|FBtr0334155|FBtr0334155 11964672|11964672|11964672|11964672|11964672|11964672|11964672|11964672|11964672 11965424|11965424|11965424|11965424|11965424|11965424|11965424|11965424|11965424 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 11964943 11965031 3'utr CG12213 FlyBase G38088.1 TTGCTAAATCCTTACAAGTTTCATTAACAAATATACTCTATATACTTGGTTTTCTGTGATAAAAATAAACGCTGCGCTGCATTTGGGCA 178 11964980 0.692796783 15 163 1662 0.931174089 2.06069784 0.052631579 0.275280899 0.477732794 178 16 1 230 3R:11964943-11965031 8 230.5 3005 FBgn0260742 1391.876667 80.28333333 122.6666667 0.165603753 2.871081586 1.879076087 2 2 2 0.1 dme-miR-14-3p 7mer-m8 AAGACTG 3R 11965085 11965091 - 3R_11965085_11965091_- 0.669234321 0.670563304 0.669898812 0.000939745 CG12213 FBtr0334155|FBtr0113223|FBtr0334156 11964672|11964672|11964672 11965424|11965424|11965424 3R - 11965012 11965152 3'utr CG12213 FlyBase G50395.1 CTCGCAGGAAATACAATACTCTGAGATGGAGCTACGAACAAATGCAGACAGATTTAAAATGAAGACTGTTTCAGTTCTGCCTTGCAAATTATTAGTCCCGAATTAGCAGTAATCGAAATCGTTGCTAAATCCTTACAAGTT 33 11965094 0.974567835 18 32 197 0.977272727 1.633468456 0.113636364 0.272727273 0.454545455 33 1 0 43 3R:11965012-11965152 7 CG12213 FBtr0334156|FBtr0113223|FBtr0334155 11964672|11964672|11964672 11965424|11965424|11965424 AAGACTG 7mer-m8 dme-miR-14-3p 3R - 11965066 11965207 3'utr CG12213 FlyBase G38089.1 AACGTCATGACTACCATCATTTCGTTAATAGCAAATGAAGAACAAGAAATTAAAACTCGCAGGAAATACAATACTCTGAGATGGAGCTACGAACAAATGCAGACAGATTTAAAATGAAGACTGTTTCAGTTCTGCCTTGCAA 23 11965084 0.976204513 13 22 143 0.96875 1.491361694 0.15625 0.347826087 0.53125 23 1 0 31 3R:11965066-11965207 7 11 3006 FBgn0260742 1391.876667 80.28333333 122.6666667 0.007902999 0.137014739 0.089673913 3 -7 -2 0.1 dme-miR-304-5p 6mer3-8 TGAGAT 3R 11965126 11965131 - 3R_11965126_11965131_- 0.999489393 0.999956551 0.999722972 0.00033036 CG12213 FBtr0334155|FBtr0113223|FBtr0334156 11964672|11964672|11964672 11965424|11965424|11965424 3R - 11965012 11965152 3'utr CG12213 FlyBase G50395.1 CTCGCAGGAAATACAATACTCTGAGATGGAGCTACGAACAAATGCAGACAGATTTAAAATGAAGACTGTTTCAGTTCTGCCTTGCAAATTATTAGTCCCGAATTAGCAGTAATCGAAATCGTTGCTAAATCCTTACAAGTT 33 11965131 0.974567835 18 32 197 0.977272727 1.633468456 0.113636364 0.272727273 0.454545455 33 1 0 43 3R:11965012-11965152 6 CG12213 FBtr0334156|FBtr0113223|FBtr0334155 11964672|11964672|11964672 11965424|11965424|11965424 TGAGAT 6mer3-8 dme-miR-304-5p 3R - 11965066 11965207 3'utr CG12213 FlyBase G38089.1 AACGTCATGACTACCATCATTTCGTTAATAGCAAATGAAGAACAAGAAATTAAAACTCGCAGGAAATACAATACTCTGAGATGGAGCTACGAACAAATGCAGACAGATTTAAAATGAAGACTGTTTCAGTTCTGCCTTGCAA 23 11965128 0.976204513 13 22 143 0.96875 1.491361694 0.15625 0.347826087 0.53125 23 1 0 31 3R:11965066-11965207 6 8.5 3007 FBgn0260742 1391.876667 80.28333333 122.6666667 0.006106863 0.105875026 0.069293478 0 -3 -1.5 0.1 dme-miR-305-5p 7mer-m1 GTACAAT 3R 12014686 12014692 + 3R_12014686_12014692_+ 0.765586663 0.76558665 0.765586657 0 GCC185 FBtr0113224 12014585 12015059 3R + 12014675 12014695 3'utr GCC185 FlyBase G42163.1 CTGTAAATCTTGTACAATTTC 5 12014685 0.607191249 4 5 40 1 0.903089987 0 0.6 0.75 5 0 0 8 3R:12014675-12014695 7 GCC185 FBtr0113224 12014585 12015059 GTACAAT 7mer-m1 dme-miR-305-5p 3R + 12014674 12014696 3'utr GCC185 FlyBase G31820.1 TCTGTAAATCTTGTACAATTTCC 6 12014684 0.670810293 3 5 48 0.875 0.84509804 0 0.333333333 0.5 6 1 0 7 3R:12014674-12014696 7 5.5 3008 FBgn0037979 856.9066667 25.72 39.52333333 0.006418435 0.213841369 0.139158303 1 2 1.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 12015178 12015183 - 3R_12015178_12015183_- 0.990217219 0.99191194 0.991064579 0.001198334 CG3313 FBtr0335433|FBtr0082555 12014941|12014941 12015246|12015246 3R - 12015162 12015199 3'utr CG3313 FlyBase G50438.1 GTAGTTATTCGACTTGTGATCTTTAATCTTTTGGCGCA 33 12015184 0.643515628 5 31 345 0.952380952 1.124938737 0.214285714 0.212121212 0.380952381 33 0 2 40 3R:12015162-12015199 6 CG3313 FBtr0335433|FBtr0082555 12014941|12014941 12015246|12015246 TGATCT 6mer3-8 dme-bantam-3p 3R - 12015163 12015197 3'utr CG3313 FlyBase G38113.1 AGTTATTCGACTTGTGATCTTTAATCTTTTGGCGC 20 12015179 0.615368066 6 18 186 0.961538462 1.397940009 0 0.315789474 0.5 19 1 0 25 3R:12015163-12015197 6 26 3009 FBgn0037980 81.43333333 5.28 7.943333333 0.319279574 4.924242424 3.273185061 1 -4 -1.5 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 12068947 12068954 - 3R_12068947_12068954_- 0.499218488 0.499196779 0.499207634 1.53E-05 ATP8B FBtr0339645|FBtr0339646|FBtr0300351|FBtr0307016|FBtr0307015|FBtr0339644|FBtr0339643 12068373|12068373|12068373|12068373|12068373|12068373|12068373 12069582|12069582|12069582|12069582|12069582|12069582|12069582 3R - 12068806 12069119 3'utr ATP8B FlyBase G50444.1 ATACCCAAACTCCTCAAAAAAGCACAAAAATCCCTTCTCGCGTATTTATATCATCGTTGACTGCATTTAAGAGAGTGAGCCCCCTGAATGATTGATTGTGTGGTTGGTTTTGAGGACTTAGAATAGGTTATATTAAGTTTATACTGTCTTTGGGAAACTGAAAGTGTACTTAATTGCTTAAATATGTGCTGTGTGCTTAGCCAATATAACTGCGGTGCTTGCCACCGATCAGAGTAGCTTATCTACAAATAGCTGAACGAACTCTCGTCTCAAAGTCCAATGCTATATGCTATATACCATATACTACCCCCAAC 933 12068955 0.986438504 62 912 7764 0.976525822 2.238882089 0.36713615 0.120042872 0.229107981 933 20 5 1040 3R:12068806-12069119 8 ATP8B FBtr0339643|FBtr0339644|FBtr0307015|FBtr0307016|FBtr0300351|FBtr0339646|FBtr0339645 12068373|12068373|12068373|12068373|12068373|12068373|12068373 12069582|12069582|12069582|12069582|12069582|12069582|12069582 GTACTTAA 8mer-A1 dme-miR-252-5p 3R - 12068886 12069078 3'utr ATP8B FlyBase G38118.1 GTATTTATATCATCGTTGACTGCATTTAAGAGAGTGAGCCCCCTGAATGATTGATTGTGTGGTTGGTTTTGAGGACTTAGAATAGGTTATATTAAGTTTATACTGTCTTTGGGAAACTGAAAGTGTACTTAATTGCTTAAATATGTGCTGTGTGCTTAGCCAATATAACTGCGGTGCTTGCCACCGATCAGAG 720 12068955 0.895378629 40 693 5933 0.964545455 2.071472874 0.398181818 0.375521558 0.591818182 719 31 8 1061 3R:12068886-12069078 8 486 3010 FBgn0037989 9025.686667 173.8733333 265.4733333 0.053846319 2.795138223 1.830692348 1 1 1 0.1 dme-miR-8-3p 7mer-A1 AGTATTA 3R 12069382 12069388 - 3R_12069382_12069388_- 0.64914931 0.808339517 0.728744414 0.11256447 ATP8B FBtr0339645|FBtr0339646|FBtr0300351|FBtr0307016|FBtr0307015|FBtr0339644|FBtr0339643 12068373|12068373|12068373|12068373|12068373|12068373|12068373 12069582|12069582|12069582|12069582|12069582|12069582|12069582 3R - 12069371 12069431 3'utr ATP8B FlyBase G50446.1 TTTAGATCTGTGTGAGTGTGAGCCAAAAAACCAAAATTGAACAAGTATTATGAAGAACGCA 36 12069394 0.692087629 10 33 170 0.909090909 1.124938737 0.227272727 0.194444444 0.340909091 36 2 2 40 3R:12069371-12069431 7 ATP8B FBtr0339643|FBtr0339644|FBtr0307015|FBtr0307016|FBtr0300351|FBtr0339646|FBtr0339645 12068373|12068373|12068373|12068373|12068373|12068373|12068373 12069582|12069582|12069582|12069582|12069582|12069582|12069582 AGTATTA 7mer-A1 dme-miR-8-3p 3R - 12069370 12069431 3'utr ATP8B FlyBase G38121.1 TTTAGATCTGTGTGAGTGTGAGCCAAAAAACCAAAATTGAACAAGTATTATGAAGAACGCAT 40 12069394 0.800170988 8 39 190 0.968253968 1.785329835 0.206349206 0.45 0.650793651 40 2 0 61 3R:12069370-12069431 7 21 3011 FBgn0037989 9025.686667 173.8733333 265.4733333 0.002326693 0.120777578 0.07910399 6 6 6 0.1 "dme-miR-995-3p,dme-miR-998-3p" 6mer2-7 GGTGCT 3R 12069565 12069570 - 3R_12069565_12069570_- 0.999849521 0.999999984 0.999924753 0.00010642 ATP8B FBtr0339645|FBtr0339646|FBtr0300351|FBtr0307016|FBtr0307015|FBtr0339644|FBtr0339643 12068373|12068373|12068373|12068373|12068373|12068373|12068373 12069582|12069582|12069582|12069582|12069582|12069582|12069582 3R - 12069497 12069722 stop_codon ATP8B FlyBase G50447.1 AGAACCAAAACCACTCGTCGATGGCAGACATAACGGCCGATGGGCGGGGCAATGGGGGAGATGATGGCAGAGGAAGTGGAGGCTCAGATGATATGAGTCCTCGTGCTCCCTGCCAGGACCTGGATACGATTAATCTCTAAGCTTTAGATGCAGGTGCTGGATCGGTAGCGGGTTTAGTAACAAACACCAAAAACTATAGGGAATTTAAGTTAGCGAACACTAAGAT 203 12069593 0.977334803 31 166 1161 0.82278481 1.68797462 0.23628692 0.142857143 0.265822785 203 39 3 195 3R:12069497-12069722 6 ATP8B FBtr0339643|FBtr0339644|FBtr0307015|FBtr0307016|FBtr0300351|FBtr0339646|FBtr0339645 12068373|12068373|12068373|12068373|12068373|12068373|12068373 12069582|12069582|12069582|12069582|12069582|12069582|12069582 GGTGCT 6mer2-7 "dme-miR-995-3p,dme-miR-998-3p" 3R - 12069480 12069694 stop_codon ATP8B FlyBase G38122.1 CATAACGGCCGATGGGCGGGGCAATGGGGGAGATGATGGCAGAGGAAGTGGAGGCTCAGATGATATGAGTCCTCGTGCTCCCTGCCAGGACCTGGATACGATTAATCTCTAAGCTTTAGATGCAGGTGCTGGATCGGTAGCGGGTTTAGTAACAAACACCAAAAACTATAGGGAATTTAAGTTAGCGAACACTAAGATAAGGATTTAAGTTTTAT 140 12069593 0.978811119 36 118 804 0.848780488 1.939519253 0.258536585 0.378571429 0.575609756 140 30 1 174 3R:12069480-12069694 6 75.5 3012 FBgn0037989 9025.686667 173.8733333 265.4733333 0.008365015 0.434224148 0.28439768 23 23 23 0.1 dme-miR-965-3p 7mer-A1 ACGCTTA 3R 12411560 12411566 + 3R_12411560_12411566_+ 0.823349562 0.823348323 0.823348943 9.19E-07 CG5196 FBtr0082585|FBtr0082584 12411468|12411468 12411768|12411768 3R + 12411491 12411594 3'utr CG5196 FlyBase G42196.1 TCGATGGCATTCTGTGCCACATTCGGCTTGTATATAGAATTAGATTCCGCTTGGAGACTCGACTGTTTAACGCTTAGCCAGGCCGTCATCCCGTTTACTCTGTT 63 12411557 0.666139571 14 57 417 0.930555556 1.826074803 0.180555556 0.111111111 0.222222222 63 5 0 67 3R:12411491-12411594 7 CG5196 FBtr0082585|FBtr0082584 12411468|12411468 12411768|12411768 ACGCTTA 7mer-A1 dme-miR-965-3p 3R + 12411512 12411562 3'utr CG5196 FlyBase G31842.1 TTCGGCTTGTATATAGAATTAGATTCCGCTTGGAGACTCGACTGTTTAACG 42 12411556 0.968215978 7 39 266 0.956521739 1.819543936 0.072463768 0.523809524 0.710144928 42 3 0 66 3R:12411512-12411562 3 20.5 3013 FBgn0038039 509 36.03 54.94 0.040275049 0.568970303 0.373134328 3 4 3.5 0.1 dme-miR-33-5p 8mer-A1 CAATGCAA 3R 12421149 12421156 + 3R_12421149_12421156_+ 0.630507422 0.630469969 0.630488695 2.64E-05 pps FBtr0304744|FBtr0082586 12420906|12420906 12421251|12421251 3R + 12421110 12421214 3'utr pps FlyBase G42215.1 AACCCGCCCCGAGCTCCAAATGGATCATCCTTCGCATTGCAATGCAAATTTAGATTCGGTTTTTACATTACGCTCTAACAAATCGTGTACATTTCCTCCGAAAAT 41 12421146 0.985695043 12 40 335 1 1.672097858 0.042553191 0.146341463 0.255319149 41 0 0 47 3R:12421110-12421214 8 pps FBtr0304744|FBtr0082586 12420906|12420906 12421251|12421251 CAATGCAA 8mer-A1 dme-miR-33-5p 3R + 12421124 12421190 3'utr pps FlyBase G31855.1 TCCAAATGGATCATCCTTCGCATTGCAATGCAAATTTAGATTCGGTTTTTACATTACGCTCTAACAA 25 12421145 0.776797677 10 24 214 0.911764706 1.491361694 0.176470588 0.28 0.470588235 25 3 0 31 3R:12421124-12421190 8 19.5 3014 FBgn0082831 827.4033333 14.92333333 22.97333333 0.023567708 1.306678579 0.848810215 3 4 3.5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3R 12458229 12458234 + 3R_12458229_12458234_+ 0.816334752 0.885200945 0.850767848 0.048695686 trus FBtr0082634 12458206 12458444 3R + 12458217 12458262 3'utr trus FlyBase G42259.1 CACGGCCATTTCCCAAAGCCATTAGAGTCATTCGCTGTAGCCGCTA 56 12458238 0.865639438 3 56 380 1 1.812913357 0.430769231 0.160714286 0.276923077 56 0 0 65 3R:12458217-12458262 6 trus FBtr0082634 12458206 12458444 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 12458219 12458312 3'utr trus FlyBase G31900.1 CGGCCATTTCCCAAAGCCATTAGAGTCATTCGCTGTAGCCGCTACGATTGCAGACTGGTGCAACGAATTTTAAACGCAAACTGCAGAGATAAAG 30 12458238 0.973560636 9 30 177 1 1.602059991 0.35 0.233333333 0.425 30 0 0 40 3R:12458219-12458312 6 36 3015 FBgn0038055 142.6666667 10.03 15.44333333 0.252336449 3.589232303 2.331102957 -9 -9 -9 0.1 dme-miR-79-3p 6mer2-7 AGCTTT 3R 12458370 12458375 + 3R_12458370_12458375_+ 0.970160692 1 0.985080346 0.021099571 trus FBtr0082634 12458206 12458444 3R + 12458309 12458386 3'utr trus FlyBase G42260.1 AAAGCTAAGCTTCTCGATTGTCCTAGGAAGATTTTATGCTCTAGTTGTTAAGAACGTTGTAAGCTTTTAGACACTCCA 10 12458367 0.987154186 8 9 81 1 1 0.1 0 0 10 0 0 10 3R:12458309-12458386 6 trus FBtr0082634 12458206 12458444 AGCTTT 6mer2-7 dme-miR-79-3p 3R + 12458358 12458386 3'utr trus FlyBase G31901.1 AAGAACGTTGTAAGCTTTTAGACACTCCA 6 12458376 0.858390259 4 6 35 1 0.77815125 0 0 0 6 0 0 6 3R:12458358-12458386 6 4.5 3016 FBgn0038055 142.6666667 10.03 15.44333333 0.031542056 0.448654038 0.29138787 3 -6 -1.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 12511283 12511288 + 3R_12511283_12511288_+ 0.999999473 0.999999925 0.999999699 2.83E-07 Hsp70Bc FBtr0082638 12511242 12511461 3R + 12511258 12511363 3'utr Hsp70Bc FlyBase G42295.1 TTATTTCGGCTTAAGTTTTTAAAAGTGATCTTAATAGTTGAGTGCCATAAAAAAATGTACATATCTTCAACTATAGTATTATACTCATATGTTAGCAACCCATTGT 190 12511283 0.842225106 22 173 1799 0.915178571 2.311753861 0.375 0.136842105 0.267857143 190 19 0 205 3R:12511258-12511363 6 Hsp70Bc FBtr0082638 12511242 12511461 TGATCT 6mer3-8 dme-bantam-3p 3R + 12511262 12511417 3'utr Hsp70Bc FlyBase G31924.1 TTCGGCTTAAGTTTTTAAAAGTGATCTTAATAGTTGAGTGCCATAAAAAAATGTACATATCTTCAACTATAGTATTATACTCATATGTTAGCAACCCATTGTTTTAACTACAAATAATAGCAAAAATAATAATAAATGCAATACTCTTAAGCATTA 115 12511283 0.851973 25 102 1017 0.886904762 1.696065014 0.291666667 0.339130435 0.547619048 115 17 2 149 3R:12511262-12511417 6 115 3017 FBgn0013279 309.6566667 15.58666667 23.73666667 0.371379054 7.378100941 4.844825165 0 0 0 0.1 dme-miR-184-3p 6mer2-7 CCGTCC 3R 12624178 12624183 - 3R_12624178_12624183_- 0.998675285 0.923203646 0.960939466 0.053366551 Vha55 FBtr0082671|FBtr0082670 12623760|12623760 12624766|12624766 3R - 12624030 12624214 3'utr Vha55 FlyBase G50617.1 AATCCCCGCCCCCTGTTTTCCGTACTGCCCCCCGTCCCTGCACCGAAACCTTGTGAACAATTTGTACAGCAACTCAACTAAACAATGGAATATTAAGTGCAAAAAACAATGCTTTAATGCAAATAATGTTTTAAATGCGGAAATCTGCAAAAAGTATAAAAATCTATAAAAAAAAATACTGTTTG 54 12624176 0.943883788 12 53 226 0.983606557 1.77815125 0.180327869 0.12962963 0.229508197 54 1 0 60 3R:12624030-12624214 6 Vha55 FBtr0082670|FBtr0082671 12623760|12623760 12624766|12624766 CCGTCC 6mer2-7 dme-miR-184-3p 3R - 12624091 12624207 3'utr Vha55 FlyBase G38258.1 GCCCCCTGTTTTCCGTACTGCCCCCCGTCCCTGCACCGAAACCTTGTGAACAATTTGTACAGCAACTCAACTAAACAATGGAATATTAAGTGCAAAAAACAATGCTTTAATGCAAAT 38 12624176 0.949966502 14 36 160 1 1.819543936 0.106060606 0.447368421 0.681818182 38 0 0 66 3R:12624091-12624207 6 31 3018 FBgn0005671 1164.673333 56.6 86.52333333 0.026616905 0.54770318 0.358284856 -7 -7 -7 0.1 dme-miR-33-5p 8mer-A1 CAATGCAA 3R 12629492 12629499 + 3R_12629492_12629499_+ 0.628484487 0.62155764 0.625021064 0.004898058 Snx3 FBtr0082642|FBtr0082641 12629451|12629451 12630495|12630061 3R + 12629305 12629529 stop_codon Snx3 FlyBase G42297.1 CATCGAGGAGCGGCGCAAGGGACTGGAGGCCTTCATCAACAAGATAGCCGGACATCCGCTGGCGCAGAACGAGCGCTGCCTGCATATGTTCCTGCAGGAGAATGTCATAGATAAGAACTACGTGCCCGGCAAGATTCGGAACACATAAGCAGCTTAGTCCGGCGCAATCGAAACCCCCTAACCATAGCAATGCAATGAAGCAAAAACTCGAACGAACAAACCTGC 50 12629489 0.919818627 17 48 163 0.980769231 1.40654018 0.326923077 0.04 0.076923077 50 0 1 51 3R:12629305-12629529 8 Snx3 FBtr0082642|FBtr0082641 12629451|12629451 12630495|12630061 CAATGCAA 8mer-A1 dme-miR-33-5p 3R + 12629376 12629667 stop_codon Snx3 FlyBase G31927.1 AGCGCTGCCTGCATATGTTCCTGCAGGAGAATGTCATAGATAAGAACTACGTGCCCGGCAAGATTCGGAACACATAAGCAGCTTAGTCCGGCGCAATCGAAACCCCCTAACCATAGCAATGCAATGAAGCAAAAACTCGAACGAACAAACCTGCTACGAAATCTTTATGGGAAGCCGTGTGAATGTGTGTGCTTGCCCGGATTGGAGGAGGATGGAGCAGATGAGCGATGATGTAGGTTGGTGGAGAAGGGATCTGTTATGCGACGCGATACGAGGCGGGAAGTGCTGCTGC 49 12629500 0.949701721 27 46 196 0.974025974 1.875061263 0.324675325 0.448979592 0.649350649 49 2 0 75 3R:12629376-12629667 8 11 3019 FBgn0038065 1577.186667 135.3066667 207.25 0.006974444 0.081296807 0.053075995 3 -8 -2.5 0.1 dme-miR-31a-5p 6mer2-7 CTTGCC 3R 12629567 12629572 + 3R_12629567_12629572_+ 0.999421158 0.972287217 0.985854187 0.019186635 Snx3 FBtr0082642|FBtr0082641 12629451|12629451 12630495|12630061 3R + 12629543 12629640 3'utr Snx3 FlyBase G42298.1 TGGGAAGCCGTGTGAATGTGTGTGCTTGCCCGGATTGGAGGAGGATGGAGCAGATGAGCGATGATGTAGGTTGGTGGAGAAGGGATCTGTTATGCGAC 38 12629568 0.95821318 15 33 209 0.891304348 1.311753861 0.47826087 0.131578947 0.282608696 38 4 1 41 3R:12629543-12629640 6 Snx3 FBtr0082642|FBtr0082641 12629451|12629451 12630495|12630061 CTTGCC 6mer2-7 dme-miR-31a-5p 3R + 12629376 12629667 stop_codon Snx3 FlyBase G31927.1 AGCGCTGCCTGCATATGTTCCTGCAGGAGAATGTCATAGATAAGAACTACGTGCCCGGCAAGATTCGGAACACATAAGCAGCTTAGTCCGGCGCAATCGAAACCCCCTAACCATAGCAATGCAATGAAGCAAAAACTCGAACGAACAAACCTGCTACGAAATCTTTATGGGAAGCCGTGTGAATGTGTGTGCTTGCCCGGATTGGAGGAGGATGGAGCAGATGAGCGATGATGTAGGTTGGTGGAGAAGGGATCTGTTATGCGACGCGATACGAGGCGGGAAGTGCTGCTGC 49 12629577 0.949701721 27 46 196 0.974025974 1.875061263 0.324675325 0.448979592 0.649350649 49 2 0 75 3R:12629376-12629667 6 12.5 3020 FBgn0038065 1577.186667 135.3066667 207.25 0.007925504 0.092382736 0.060313631 -1 -10 -5.5 0.1 dme-miR-980-3p 6mer2-7 GCAGCT 3R 12704567 12704572 + 3R_12704567_12704572_+ 0.997178425 0.997717497 0.997447961 0.000381201 Past1 FBtr0082655 12704080 12704875 3R + 12704398 12704631 3'utr Past1 FlyBase G42337.1 AAAGCAGGATGTAGAGTAGCAGCCTAGTGGAATAAGACAAGGAGTGTGTGTTAAGCGCCTAATTGTCATTGTTGACTTAAGGAAAGTGAAGTGTGGATAAACAATTGTTCAATGCCAATGAAAAAAGCATGAGTTAAACTGTATACAATATCTAGGTTAATGTCGATGTGCAGCTTGAAGGGCCATTAATTTGCAATCGTACCACTTTTGATACACAATAAATGTATTTTTGTT 473 12704564 0.976979186 34 459 3347 0.971751412 2.411619706 0.199623352 0.109936575 0.207156309 473 14 1 516 3R:12704398-12704631 6 Past1 FBtr0082655 12704080 12704875 GCAGCT 6mer2-7 dme-miR-980-3p 3R + 12704388 12704616 3'utr Past1 FlyBase G31961.1 AATCGATTGTAAAGCAGGATGTAGAGTAGCAGCCTAGTGGAATAAGACAAGGAGTGTGTGTTAAGCGCCTAATTGTCATTGTTGACTTAAGGAAAGTGAAGTGTGGATAAACAATTGTTCAATGCCAATGAAAAAAGCATGAGTTAAACTGTATACAATATCTAGGTTAATGTCGATGTGCAGCTTGAAGGGCCATTAATTTGCAATCGTACCACTTTTGATACACAAT 317 12704564 0.978762787 25 307 2085 0.965092402 1.973127854 0.170431211 0.372239748 0.59137577 317 13 4 470 3R:12704388-12704616 6 319 3021 FBgn0016693 1355.16 61.20333333 93.61666667 0.235396558 5.212134415 3.407512907 3 3 3 0.1 dme-miR-34-5p 6mer2-7 ACTGCC 3R 12704760 12704765 + 3R_12704760_12704765_+ 0.998936744 0.999999169 0.999467956 0.000751301 Past1 FBtr0082655 12704080 12704875 3R + 12704742 12704809 3'utr Past1 FlyBase G42339.1 AAGAGAAACGTGCAATTTACTGCCTGTGCTTCGACTATTTTGTAATTAGTGAATTCTTGAATATTAAA 14 12704777 0.901953916 10 14 127 1 1.380211242 0.083333333 0.357142857 0.625 14 0 0 24 3R:12704742-12704809 6 Past1 FBtr0082655 12704080 12704875 ACTGCC 6mer2-7 dme-miR-34-5p 3R + 12704747 12704777 3'utr Past1 FlyBase G31962.1 AAACGTGCAATTTACTGCCTGTGCTTCGACT 8 12704759 0.611920348 6 8 59 1 1.041392685 0.181818182 0.375 0.545454545 8 0 0 11 3R:12704747-12704777 6 9 3022 FBgn0016693 1355.16 61.20333333 93.61666667 0.006641282 0.147050814 0.096136728 -17 1 -8 0.1 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 12705588 12705595 - 3R_12705588_12705595_- 0.631133799 0.631047442 0.63109062 6.11E-05 mus308 FBtr0082662 12705521 12705670 3R - 12705527 12705658 3'utr mus308 FlyBase G50655.1 TTTTATAGATTTGTAATCAATTTGTTTAAAGACTGAATGTTTTAGGACTGCTTGGCCTGCCACTCCGTCCATGATCCGGCATAAGCCTTGGCGCTGCAATTGATTAATAAATAATTGTACATATCTTTTAAA 210 12705595 0.982086269 23 192 1423 0.905882353 1.886490725 0.101960784 0.19047619 0.333333333 210 22 2 231 3R:12705527-12705658 8 mus308 FBtr0082662 12705521 12705670 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R - 12705560 12705653 3'utr mus308 FlyBase G38284.1 TAGATTTGTAATCAATTTGTTTAAAGACTGAATGTTTTAGGACTGCTTGGCCTGCCACTCCGTCCATGATCCGGCATAAGCCTTGGCGCTGCAA 136 12705595 0.732745538 20 126 897 0.923423423 2.010723865 0.207207207 0.463235294 0.671171171 136 16 1 205 3R:12705560-12705653 8 104 3023 FBgn0002905 561.1366667 10.60333333 16.29666667 0.185338094 9.808236404 6.381673144 0 0 0 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 12713182 12713187 - 3R_12713182_12713187_- 0.650534625 0.642549773 0.646542199 0.005646106 Men FBtr0082661|FBtr0330025|FBtr0082660 12713101|12713101|12713101 12713471|12713471|12713471 3R - 12713143 12713251 3'utr Men FlyBase G50663.1 AAATGGAATGTCATCAGCTTGCGGCGCGCGATTTTGTATAATGCTAACTATGTAAATGGGATATTGATCTAATAGATATGTAAACAAATTTTATGTAATCTTGAACAAC 818 12713188 0.760165803 21 802 6506 0.979360165 2.375206221 0.682146543 0.163814181 0.294117647 818 17 3 949 3R:12713143-12713251 6 Men FBtr0330025|FBtr0082660|FBtr0082661 12713101|12713101|12713101 12713471|12713471|12713471 TGATCT 6mer3-8 dme-bantam-3p 3R - 12713157 12713244 3'utr Men FlyBase G38290.1 ATGTCATCAGCTTGCGGCGCGCGATTTTGTATAATGCTAACTATGTAAATGGGATATTGATCTAATAGATATGTAAACAAATTTTATG 494 12713188 0.771595117 19 479 3950 0.974160207 2.57634135 0.666666667 0.410931174 0.624031008 494 19 1 754 3R:12713157-12713244 6 641 3024 FBgn0002719 1553 77.69 118.1366667 0.412749517 8.250740121 5.425919133 1 1 1 0.1 dme-miR-305-3p 7mer-A1 TGTGCCA 3R 12950172 12950178 - 3R_12950172_12950178_- 0.781610225 0.782794235 0.78220223 0.000837214 grsm FBtr0082730|FBtr0344095 12950040|12950040 12950195|12950195 3R - 12950139 12950213 stop_codon grsm FlyBase G50683.1 CGCTGGTGCCGCGATTAACTCAGCCTGCCTTTTACTGTGCCACGTGCCTGACTGGATTAACATTTCCATCATTTT 16 12950183 0.982459633 11 14 107 0.842105263 0.726998728 0.315789474 0.1875 0.315789474 16 1 2 16 3R:12950139-12950213 7 grsm FBtr0082730|FBtr0344095 12950040|12950040 12950195|12950195 TGTGCCA 7mer-A1 dme-miR-305-3p 3R - 12950154 12950209 stop_codon grsm FlyBase G38306.1 GGTGCCGCGATTAACTCAGCCTGCCTTTTACTGTGCCACGTGCCTGACTGGATTAA 10 12950195 0.988853232 5 8 64 0.764705882 0.812913357 0.411764706 0.5 0.705882353 10 3 1 13 3R:12950154-12950209 7 4 3025 FBgn0040493 1111.996667 68.50333333 104.3933333 0.003597133 0.058391319 0.038316623 5 17 11 0.1 dme-miR-304-5p 7mer-m8 TGAGATT 3R 12984373 12984379 + 3R_12984373_12984379_+ 0.619959746 0.620027759 0.619993753 4.82E-05 Paip2 FBtr0082693 12984239 12985488 3R + 12984113 12984480 stop_codon Paip2 FlyBase G42354.1 CGGACGAGCAGAACACGGCACTTTCCGCACTACCCAAGAGCCAGTGTGATGTTGAAAAGTCTGTTCTGAATCCGATGGCTGATGAGTTTGTTCCGCGTTGTCATGTTATAGATTTCCCTGCCTCATAAAGCCAGCCCATATCTCCTGCCCGCCACAGAATCACAAACTACCCCGAACCCGTACCACGTGGACCTCATACGCGAAAAACCTTAGATAAACTGAAGACCCATTGCTAAGACTAGACTAACAGATTCCGCTAATGAGATTGATATTGATATTCTGACCAAGTTGAGCCAGATGGAGCATTGGGAGCAGTGGCTCATGAATATCTTATTTCTAGATACCAAAATGCTGGAAAAGAAAACTAA 582 12984373 0.96967329 55 560 3164 0.964285714 1.829303773 0.205714286 0.161512027 0.302857143 582 16 9 675 3R:12984113-12984480 7 Paip2 FBtr0082693 12984239 12985488 TGAGATT 7mer-m8 dme-miR-304-5p 3R + 12984213 12984483 stop_codon Paip2 FlyBase G31972.1 TCATGTTATAGATTTCCCTGCCTCATAAAGCCAGCCCATATCTCCTGCCCGCCACAGAATCACAAACTACCCCGAACCCGTACCACGTGGACCTCATACGCGAAAAACCTTAGATAAACTGAAGACCCATTGCTAAGACTAGACTAACAGATTCCGCTAATGAGATTGATATTGATATTCTGACCAAGTTGAGCCAGATGGAGCATTGGGAGCAGTGGCTCATGAATATCTTATTTCTAGATACCAAAATGCTGGAAAAGAAAACTAAATA 347 12984373 0.948630023 33 333 1728 0.954022989 2.220108088 0.168582375 0.342939481 0.563218391 347 22 2 498 3R:12984213-12984483 7 158.5 3026 FBgn0038100 1800.366667 110.8333333 168.6533333 0.088037622 1.430075188 0.939797612 0 0 0 0.1 dme-miR-999-3p 6mer2-7 GTTAAC 3R 12985120 12985125 + 3R_12985120_12985125_+ 1 1 1 0 Paip2 FBtr0082693 12984239 12985488 3R + 12985061 12985184 3'utr Paip2 FlyBase G42357.1 TAATCTTTCACCATTGTTAACTCGTTGTACGTTCTATGCCCAAGTAACAAGAAGCGCTTGTTAACCTTCCCTACTGACTCGCAATATTTGTAATTTACCAATATAATCTAGTGAACTAAACGAA 62 12985127 0.754702992 16 60 435 0.974025974 1.875061263 0.155844156 0.177419355 0.337662338 62 2 0 75 3R:12985061-12985184 6 Paip2 FBtr0082693 12984239 12985488 GTTAAC 6mer2-7 dme-miR-999-3p 3R + 12985065 12985151 3'utr Paip2 FlyBase G31974.1 CTTTCACCATTGTTAACTCGTTGTACGTTCTATGCCCAAGTAACAAGAAGCGCTTGTTAACCTTCCCTACTGACTCGCAATATTTGT 39 12985128 0.979524652 12 39 271 1 1.77815125 0.033333333 0.435897436 0.633333333 39 0 0 60 3R:12985065-12985151 6 37 3027 FBgn0038100 1800.366667 110.8333333 168.6533333 0.020551369 0.333834586 0.219384932 -7 -8 -7.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 12985241 12985246 + 3R_12985241_12985246_+ 0.999999701 0.999994622 0.999997161 3.61E-06 Paip2 FBtr0082693 12984239 12985488 3R + 12985192 12985305 3'utr Paip2 FlyBase G42358.1 ACTAATGTTTAACGCCTCTTTATACAAACATCATGCATAAATATGTATATCTAGTGTTAATGGAGGAGACAACAGACAACAACAACGCTGCAATAACAAGTAGTTTGTAATTTT 47 12985251 0.951726401 13 44 247 0.944444444 1.707570176 0.111111111 0.14893617 0.259259259 47 3 0 51 3R:12985192-12985305 6 Paip2 FBtr0082693 12984239 12985488 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 12985192 12985305 3'utr Paip2 FlyBase G31975.1 ACTAATGTTTAACGCCTCTTTATACAAACATCATGCATAAATATGTATATCTAGTGTTAATGGAGGAGACAACAGACAACAACAACGCTGCAATAACAAGTAGTTTGTAATTTT 55 12985252 0.961866216 11 43 292 0.811764706 1.537819095 0.070588235 0.381818182 0.6 55 15 1 69 3R:12985192-12985305 6 15.5 3028 FBgn0038100 1800.366667 110.8333333 168.6533333 0.008609357 0.139849624 0.091904498 -10 -11 -10.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 12985473 12985479 + 3R_12985473_12985479_+ 0.76809067 0.765972281 0.767031475 0.001497935 Paip2 FBtr0082693|FBtr0082693|FBtr0082693 12984239|12984239|12984239 12985488|12985488|12985488 3R + 12985356 12985494 3'utr Paip2 FlyBase G42359.1 AATATCGTTAAAATTCGTTTCGGCATGTAGACAAAGATGAATTTCTATTTTTTCAATCAACTTAGATTTAGTGACTTAAGACAGCATTATAAGATCTACTACATTACTTACGTTACGTGTGATATAAAGATACAAAAAA 266 12985468 0.985411281 29 227 1871 0.847560976 1.745074792 0.176829268 0.203007519 0.353658537 266 46 4 278 3R:12985356-12985494 7 Paip2 FBtr0082693|FBtr0082693|FBtr0082693 12984239|12984239|12984239 12985488|12985488|12985488 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 12985409 12985493 3'utr Paip2 FlyBase G31976.2 CAATCAACTTAGATTTAGTGACTTAAGACAGCATTATAAGATCTACTACATTACTTACGTTACGTGTGATATAAAGATACAAAAA 179 12985468 0.692630658 20 160 1228 0.891525424 1.942834494 0.183050847 0.430167598 0.654237288 179 30 2 263 3R:12985409-12985493 7 167.5 3029 FBgn0038100 1800.366667 110.8333333 168.6533333 0.093036604 1.511278195 0.993161515 5 5 5 0.1 dme-miR-33-5p 6mer3-8 CAATGC 3R 12990175 12990180 + 3R_12990175_12990180_+ 0.969388443 0.99998641 0.984687427 0.021636053 CG31342 FBtr0113404 12990027 12991543 3R + 12990155 12990247 3'utr CG31342 FlyBase G42375.1 AAGGAACACCCTGTGCTCTACAATGCCCTACACATCGGTGATCAGCTACTGTCCATAGCAGGTGTGAGCATTAGCAGTGCAGCTGAGGCCAAC 23 12990196 0.933213193 9 22 112 0.966666667 1.462397998 0.166666667 0.260869565 0.433333333 23 1 0 29 3R:12990155-12990247 6 CG31342 FBtr0113404 12990027 12991543 CAATGC 6mer3-8 dme-miR-33-5p 3R + 12990136 12990219 3'utr CG31342 FlyBase G31994.1 GATTGCAGGCTGGAAGCAGAAGGAACACCCTGTGCTCTACAATGCCCTACACATCGGTGATCAGCTACTGTCCATAGCAGGTGT 13 12990198 0.973748711 7 12 75 0.956521739 1.041392685 0.173913043 0.461538462 0.695652174 13 0 1 22 3R:12990136-12990219 6 6 3030 FBgn0051342 1698.813333 51.87 79.48333333 0.003531877 0.1156738 0.075487524 -21 -23 -22 0.1 dme-miR-965-3p 6mer3-8 TACGCT 3R 12990268 12990273 + 3R_12990268_12990273_+ 1 0.999991612 0.999995806 5.94E-06 CG31342 FBtr0113404 12990027 12991543 3R + 12990256 12990278 3'utr-intron CG31342 FlyBase G42376.1 AAGGAACACCAATACGCTATTTG 14 12990268 0.933052288 3 12 58 0.857142857 0.77815125 0.428571429 0 0 14 1 1 12 3R:12990256-12990278 6 CG31342 FBtr0113404 12990027 12991543 TACGCT 6mer3-8 dme-miR-965-3p 3R + 12990248 12990279 3'utr-intron CG31342 FlyBase G31995.1 AAGATAATAAGGAACACCAATACGCTATTTGT 10 12990268 0.957266759 3 9 43 0.933333333 1.146128036 0.333333333 0.5 0.666666667 10 1 0 14 3R:12990248-12990279 6 12 3031 FBgn0051342 1698.813333 51.87 79.48333333 0.007063754 0.2313476 0.150975047 0 0 0 0.1 dme-miR-995-5p 7mer-m1 ATTCGGG 3R 12990422 12990428 + 3R_12990422_12990428_+ 0.824926766 0.825582373 0.825254569 0.000463579 CG31342 FBtr0113404 12990027 12991543 3R + 12990393 12990467 3'utr CG31342 FlyBase G42377.1 GTGACCGCGAGGGTCAGTGCCTGGGTCTGATTCGGGATGGAAACACTTCGACAATCGTGGATGTGGTGCCAAATA 14 12990422 0.959971955 6 14 75 1 1.204119983 0.4375 0.142857143 0.25 14 0 0 16 3R:12990393-12990467 7 CG31342 FBtr0113404 12990027 12991543 ATTCGGG 7mer-m1 dme-miR-995-5p 3R + 12990402 12990436 3'utr CG31342 FlyBase G31996.1 AGGGTCAGTGCCTGGGTCTGATTCGGGATGGAAAC 5 12990410 0.876938063 2 4 32 0.888888889 0.602059991 0.666666667 0.4 0.666666667 5 0 1 8 3R:12990402-12990436 7 5.5 3032 FBgn0051342 1698.813333 51.87 79.48333333 0.003237554 0.106034317 0.069196897 0 12 6 0.1 dme-miR-7-5p 7mer-m8 GTCTTCC 3R 12990486 12990492 + 3R_12990486_12990492_+ 0.705839543 0.705846667 0.705843105 5.09E-06 CG31342 FBtr0113404 12990027 12991543 3R + 12990468 12990499 3'utr CG31342 FlyBase G42378.1 GTTTGGCTGCACGTCACGGTCTTCCGCCCAAG 28 12990489 0.723575395 2 27 141 0.9375 1 0.71875 0.142857143 0.25 28 0 2 30 3R:12990468-12990499 7 CG31342 FBtr0113404 12990027 12991543 GTCTTCC 7mer-m8 dme-miR-7-5p 3R + 12990438 12990499 3'utr CG31342 FlyBase G31997.1 CTTCGACAATCGTGGATGTGGTGCCAAATAGTTTGGCTGCACGTCACGGTCTTCCGCCCAAG 10 12990489 0.780740184 4 10 56 1 1.255272505 0.444444444 0.7 0.833333333 10 0 0 18 3R:12990438-12990499 7 17 3033 FBgn0051342 1698.813333 51.87 79.48333333 0.010006985 0.327742433 0.213881317 -3 -3 -3 0.1 dme-miR-252-5p 7mer-m1 TACTTAG 3R 12990754 12990760 + 3R_12990754_12990760_+ 0.702967577 0.702776614 0.702872096 0.000135057 CG31342 FBtr0113404 12990027 12991543 3R + 12990631 12990771 stop_codon CG31342 FlyBase G42380.1 AAGGATTTCGAGATACGCGACCGCCTGAACTCCGTGGGACGCGATATATCCATTTTGGTGCAACCGTCGGATTTGATAACCAAGCTGAAAAAGCAGCTGAAGTCGCTGCGCGGCTACAAGGATTACTTAGTGCAGTAGTCA 36 12990753 0.965213092 13 33 200 0.931818182 1.612783857 0.318181818 0.222222222 0.363636364 36 3 0 41 3R:12990631-12990771 7 CG31342 FBtr0113404 12990027 12991543 TACTTAG 7mer-m1 dme-miR-252-5p 3R + 12990673 12990818 stop_codon CG31342 FlyBase G31999.1 GATATATCCATTTTGGTGCAACCGTCGGATTTGATAACCAAGCTGAAAAAGCAGCTGAAGTCGCTGCGCGGCTACAAGGATTACTTAGTGCAGTAGTCACTAGCTATAACGAACGATTCCATATAACCACAAATAACTCTCAACTG 42 12990754 0.892877914 17 36 207 0.85483871 0.821185883 0.209677419 0.357142857 0.564516129 42 2 7 53 3R:12990673-12990818 7 17 3034 FBgn0051342 1698.813333 51.87 79.48333333 0.010006985 0.327742433 0.213881317 1 0 0.5 0.1 dme-miR-1002-5p 8mer-A1 CTACTTAA 3R 12990985 12990992 + 3R_12990985_12990992_+ 0.421368407 0.334176654 0.37777253 0.061653842 CG31342 FBtr0113404|FBtr0113403 12990027|12990767 12991543|12991543 3R + 12990936 12991080 3'utr CG31342 FlyBase G42383.1 TTTCGCTATATTACGTACTACACACTACATATATTAACTATGATCGAAACTACTTAAAGGACTTAGGTGTAGCGTTGAGGAACATATACAAAAGCAACCTATATATTTTTTGCAAAACTTTATATAAACTCGTACATATATATAC 45 12990988 0.647602234 21 42 302 0.93220339 1.740362689 0.118644068 0.244444444 0.423728814 45 4 0 55 3R:12990936-12991080 8 CG31342 FBtr0113403|FBtr0113404 12990767|12990027 12991543|12991543 CTACTTAA 8mer-A1 dme-miR-1002-5p 3R + 12990938 12991086 3'utr CG31342 FlyBase G32001.1 TCGCTATATTACGTACTACACACTACATATATTAACTATGATCGAAACTACTTAAAGGACTTAGGTGTAGCGTTGAGGAACATATACAAAAGCAACCTATATATTTTTTGCAAAACTTTATATAAACTCGTACATATATATACAAATTG 34 12990976 0.975967789 20 32 213 0.966101695 1.45484486 0.254237288 0.588235294 0.762711864 34 1 1 57 3R:12990938-12991086 8 21 3035 FBgn0051342 1698.813333 51.87 79.48333333 0.01236157 0.4048583 0.264206333 -3 9 3 0.1 dme-miR-999-3p 7mer-A1 GTTAACA 3R 12991234 12991240 + 3R_12991234_12991240_+ 0.81945857 0.822709227 0.821083898 0.002298521 CG31342 FBtr0113404|FBtr0113403 12990027|12990767 12991543|12991543 3R + 12991173 12991247 3'utr CG31342 FlyBase G42385.1 GAATTTGTTTAGATGCGGAAAAGTTATGAGAAATTTACAACATGAAATTCAAGTATTTTAGGTTAACATATACAC 232 12991230 0.977655096 13 231 2038 0.996183206 2.416640507 0.049618321 0.099137931 0.202290076 232 1 0 261 3R:12991173-12991247 7 CG31342 FBtr0113403|FBtr0113404 12990767|12990027 12991543|12991543 GTTAACA 7mer-A1 dme-miR-999-3p 3R + 12991168 12991251 3'utr CG31342 FlyBase G32003.1 ACCTCGAATTTGTTTAGATGCGGAAAAGTTATGAGAAATTTACAACATGAAATTCAAGTATTTTAGGTTAACATATACACGCGT 187 12991230 0.904181126 12 181 1610 0.971631206 1.738780558 0.042553191 0.368983957 0.581560284 187 4 4 274 3R:12991168-12991251 7 184.5 3036 FBgn0051342 1698.813333 51.87 79.48333333 0.108605222 3.556969346 2.32124135 4 4 4 0.1 dme-miR-317-5p 6mer3-8 GTATCC 3R 12991281 12991286 + 3R_12991281_12991286_+ 0.806567005 0.7052378 0.755902402 0.071650564 CG31342 FBtr0113404|FBtr0113403 12990027|12990767 12991543|12991543 3R + 12991260 12991405 3'utr CG31342 FlyBase G42386.1 CACACACAACTGTGCAACTTAGTATCCTTATGCAATATTGGAGTGCCTCTGATTTTGTTCATTGATGTTGTTTTCTTTCATGTTTTCATTTGTTTCGTGCGAAAAGACATACGCATCTGTCGTAACATATAAGATGTGATAAAAAT 26 12991280 0.989631364 19 25 198 0.96875 1.190331698 0.0625 0.076923077 0.25 26 0 1 31 3R:12991260-12991405 6 CG31342 FBtr0113403|FBtr0113404 12990767|12990027 12991543|12991543 GTATCC 6mer3-8 dme-miR-317-5p 3R + 12991259 12991330 3'utr CG31342 FlyBase G32004.1 ACACACACAACTGTGCAACTTAGTATCCTTATGCAATATTGGAGTGCCTCTGATTTTGTTCATTGATGTTGT 23 12991279 0.866605697 12 21 183 0.90625 1.462397998 0.375 0.347826087 0.53125 23 3 0 29 3R:12991259-12991330 6 11 3037 FBgn0051342 1698.813333 51.87 79.48333333 0.006475108 0.212068633 0.138393793 1 2 1.5 0.1 dme-miR-79-3p 6mer2-7 AGCTTT 3R 12996927 12996932 - 3R_12996927_12996932_- 0.998856436 0.999235154 0.999045795 0.000267852 CG44194 FBtr0336814|FBtr0344448 12996874|12996874 12997324|12997324 3R - 12996879 12997108 3'utr CG44194 FlyBase G50704.1 GCGCGTGGACAACTTCGAGCAGCTAAACTCCCTGGAGCGACAGGCCCAAGAGTCGAACGTGGTGGCCGCCTTGGTGAGGGATGCCGGGCGCACTCAGCTGGAATCTGGGACAGCAACGGTCCTCGGACTGGGTCCAGCCCCTGCCGAAGATCTAGACAAATTGGTGGCGCATTTGAAGCTTTTGTGAACTCTTAGGTTTATGCAACGTTACAAATAAAGTACAAGTAATC 448 12996917 0.991141742 31 429 4519 0.964552239 1.868392503 0.235074627 0.171875 0.307835821 448 13 6 517 3R:12996879-12997108 6 CG44194 FBtr0344448|FBtr0336814 12996874|12996874 12997324|12997324 AGCTTT 6mer2-7 dme-miR-79-3p 3R - 12996876 12996994 3'utr CG44194 FlyBase G38319.1 AACGGTCCTCGGACTGGGTCCAGCCCCTGCCGAAGATCTAGACAAATTGGTGGCGCATTTGAAGCTTTTGTGAACTCTTAGGTTTATGCAACGTTACAAATAAAGTACAAGTAATCAAC 280 12996917 0.834872537 21 271 2728 0.96882494 2.606381365 0.24940048 0.360714286 0.570743405 280 13 0 404 3R:12996876-12996994 6 328 3038 FBgn0265083 203.1666667 36.95 56.61333333 1.614438064 8.876860622 5.793688177 -15 -15 -15 0.1 dme-bantam-3p 8mer-A1 TGATCTCA 3R 13022979 13022986 + 3R_13022979_13022986_+ 0.631136385 0.631136385 0.631136385 0 CtBP FBtr0334513|FBtr0082700|FBtr0082702|FBtr0082699 13021676|13021676|13021676|13021676 13024097|13024097|13024097|13024097 3R + 13022943 13023009 3'utr CtBP FlyBase G42481.1 TATTCTGTTGCTCAAGCTCTGCTCTAATTTACAATATGATCTCATCATTCAAGTTTATTTTCGCCTT 84 13022978 0.759827641 12 81 734 0.973684211 2.045322979 0 0.261904762 0.456140351 84 3 0 111 3R:13022943-13023009 8 CtBP FBtr0082702|FBtr0082699|FBtr0334513|FBtr0082700 13021676|13021676|13021676|13021676 13024097|13024097|13024097|13024097 TGATCTCA 8mer-A1 dme-bantam-3p 3R + 13022944 13023006 3'utr CtBP FlyBase G32078.1 ATTCTGTTGCTCAAGCTCTGCTCTAATTTACAATATGATCTCATCATTCAAGTTTATTTTCGC 63 13022978 0.735181047 11 61 538 0.979381443 1.977723605 0 0.380952381 0.597938144 63 2 0 95 3R:13022944-13023006 8 68 3039 FBgn0020496 3905.446667 142.2566667 217.6 0.017411581 0.478009232 0.3125 1 1 1 0.1 dme-miR-2b-2-5p 6mer2-7 TGAAGA 3R 13025506 13025511 + 3R_13025506_13025511_+ 0.999999875 1 0.999999937 7.07E-08 CtBP FBtr0334515|FBtr0334516|FBtr0100161|FBtr0334517|FBtr0334514 13025471|13025410|13025471|13025471|13025471 13026275|13026275|13026275|13026275|13026275 3R + 13025471 13025562 stop_codon CtBP FlyBase G42494.1 AGGCATCTGCTGTCCAACTGGCTGCACCTGAGAGCTGAAGAGCTGGAGTTGACGATGACAACGGGCAGTGGCGCAATGGAGTCCAGCACACA 33 13025498 0.871761709 11 33 126 1 1.556302501 0.5 0.090909091 0.166666667 33 0 0 36 3R:13025471-13025562 6 CtBP FBtr0334517|FBtr0334514|FBtr0334515|FBtr0334516|FBtr0100161 13025471|13025471|13025471|13025410|13025471 13026275|13026275|13026275|13026275|13026275 TGAAGA 6mer2-7 dme-miR-2b-2-5p 3R + 13025472 13025522 3'utr CtBP FlyBase G32087.1 GGCATCTGCTGTCCAACTGGCTGCACCTGAGAGCTGAAGAGCTGGAGTTGA 15 13025505 0.850097209 4 15 62 1 1.322219295 0.523809524 0.4 0.571428571 15 0 0 21 3R:13025472-13025522 6 17.5 3040 FBgn0020496 3905.446667 142.2566667 217.6 0.004480922 0.123017082 0.080422794 8 1 4.5 0.1 dme-miR-995-5p 7mer-m8 AATTCGG 3R 13025648 13025654 + 3R_13025648_13025654_+ 0.606090883 0.563485899 0.584788391 0.030126284 CtBP FBtr0334515|FBtr0334516|FBtr0100161|FBtr0334517|FBtr0334514 13025471|13025410|13025471|13025471|13025471 13026275|13026275|13026275|13026275|13026275 3R + 13025593 13025684 3'utr CtBP FlyBase G42495.1 GAGGAGGAGGAGTAGGCGGCGTAGTACGAGCATTGTGGAGCAGTAGACCCCATGGAATTCGGTCCCCAAGGATAAAACTTAACGAGAAACAA 16 13025650 0.957682406 6 14 67 0.857142857 1.255272505 0.19047619 0.25 0.428571429 16 3 0 18 3R:13025593-13025684 7 CtBP FBtr0334517|FBtr0334514|FBtr0334515|FBtr0334516|FBtr0100161 13025471|13025471|13025471|13025410|13025471 13026275|13026275|13026275|13026275|13026275 AATTCGG 7mer-m8 dme-miR-995-5p 3R + 13025625 13025659 3'utr CtBP FlyBase G32088.1 TTGTGGAGCAGTAGACCCCATGGAATTCGGTCCCC 10 13025650 0.726968154 5 9 34 0.941176471 1.204119983 0.176470588 0.5 0.705882353 10 1 0 16 3R:13025625-13025659 7 8.5 3041 FBgn0020496 3905.446667 142.2566667 217.6 0.002176448 0.059751154 0.0390625 -2 -2 -2 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 3R 13026643 13026648 - 3R_13026643_13026648_- 0.953831745 0.531569798 0.742700771 0.298584253 CG12360 FBtr0082718 13026281 13027300 3R - 13026629 13026675 3'utr CG12360 FlyBase G50721.1 AAGTCGTTAGCTAGTACTCTGCAGAATTGTGTTATAAGTGTATAACT 18 13026649 0.826420935 4 18 165 1 1.322219295 0 0.166666667 0.285714286 18 0 0 21 3R:13026629-13026675 6 CG12360 FBtr0082718 13026281 13027300 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 13026595 13026677 3'utr CG12360 FlyBase G38338.1 CCAAGTCGTTAGCTAGTACTCTGCAGAATTGTGTTATAAGTGTATAACTAAAGCTAGAAAAAAAGAGGAATTTTACAAAACGA 25 13026649 0.985563081 6 24 194 0.971428571 1.230448921 0.057142857 0.28 0.485714286 25 0 1 34 3R:13026595-13026677 6 17.5 3042 FBgn0038111 3027.056667 147.83 226.9233333 0.005781193 0.118379219 0.077118557 1 1 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 13031554 13031559 + 3R_13031554_13031559_+ 0.9971422 0.993975052 0.995558626 0.002239478 l(3)87Df FBtr0082703 13031448 13031598 3R + 13031532 13031588 3'utr l(3)87Df FlyBase G42502.1 GTGTTGTAAACTACCTTTTGTTACCAAACTTTATAGTAGCCAATATATTATATATAT 6 13031549 0.992026771 4 6 57 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 3R:13031532-13031588 6 l(3)87Df FBtr0082703 13031448 13031598 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 13031517 13031593 3'utr l(3)87Df FlyBase G32095.1 ATTGTTAAATCCCTTGTGTTGTAAACTACCTTTTGTTACCAAACTTTATAGTAGCCAATATATTATATATATGTTGT 13 13031549 0.98811462 9 13 120 1 1.431363764 0 0.692307692 0.851851852 13 0 0 27 3R:13031517-13031593 6 3 3043 FBgn0002354 69.66666667 16.79 25.5 0.043062201 0.178677784 0.117647059 5 5 5 0.1 dme-miR-184-5p 6mer3-8 TGATAA 3R 13262162 13262167 + 3R_13262162_13262167_+ 1 0.999999983 0.999999992 0 CG11686 FBtr0082735|FBtr0335222 13262120|13262120 13262227|13262227 3R + 13262143 13262190 3'utr CG11686 FlyBase G42527.1 AATTAACTAAGTGCCTTACTGATAACTCTTGTTTTCAATCATTTTTTA 17 13262159 0.658410539 7 17 153 1 1.322219295 0.047619048 0.176470588 0.333333333 17 0 0 21 3R:13262143-13262190 6 CG11686 FBtr0335222|FBtr0082735 13262120|13262120 13262227|13262227 TGATAA 6mer3-8 dme-miR-184-5p 3R + 13262143 13262182 3'utr CG11686 FlyBase G32118.1 AATTAACTAAGTGCCTTACTGATAACTCTTGTTTTCAATC 20 13262159 0.718139279 5 18 169 0.928571429 1.414973348 0.321428571 0.35 0.535714286 20 2 0 26 3R:13262143-13262182 6 18.5 3044 FBgn0040551 12.66666667 4.276666667 6.6 1.460526316 4.325798909 2.803030303 3 3 3 0.1 dme-miR-184-3p 7mer-A1 CCGTCCA 3R 13269681 13269687 + 3R_13269681_13269687_+ 0.822096361 0.804524888 0.813310624 0.012424927 Su(var)3-7 FBtr0082736 13268891 13270038 3R + 13269653 13269708 3'utr Su(var)3-7 FlyBase G42548.1 GTCCAGAAAGCTGCATAGCTCTTCAATCCCGTCCAGTGTCCGACCGAGTTCTTCGC 168 13269679 0.853542176 4 159 1157 0.950819672 1.638489257 0.371584699 0.089285714 0.163934426 168 6 3 174 3R:13269653-13269708 7 Su(var)3-7 FBtr0082736 13268891 13270038 CCGTCCA 7mer-A1 dme-miR-184-3p 3R + 13269652 13269710 3'utr Su(var)3-7 FlyBase G32132.1 CGTCCAGAAAGCTGCATAGCTCTTCAATCCCGTCCAGTGTCCGACCGAGTTCTTCGCTA 67 13269679 0.80390213 5 60 464 0.918604651 1.596597096 0.313953488 0.268656716 0.430232558 67 6 1 79 3R:13269652-13269710 7 115 3045 FBgn0003598 516.8066667 14.16 21.58 0.222520349 8.121468927 5.329008341 2 2 2 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 3R 13269956 13269962 + 3R_13269956_13269962_+ 0.782911807 0.770812977 0.776862392 0.008555144 Su(var)3-7 FBtr0082736 13268891 13270038 3R + 13269952 13269987 3'utr Su(var)3-7 FlyBase G42550.1 ATATGTACAAAAGATTGGCTTAGATTTAAGTAGTTT 5 13269969 0.701696443 4 5 41 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 3R:13269952-13269987 7 Su(var)3-7 FBtr0082736 13268891 13270038 GTACAAA 7mer-A1 dme-miR-305-5p 3R + 13269949 13269987 3'utr Su(var)3-7 FlyBase G32133.1 AAAATATGTACAAAAGATTGGCTTAGATTTAAGTAGTTT 6 13269968 0.761742793 3 5 56 0.857142857 0.77815125 0 0.166666667 0.285714286 6 1 0 6 3R:13269949-13269987 7 4.5 3046 FBgn0003598 516.8066667 14.16 21.58 0.008707318 0.31779661 0.208526413 -13 -12 -12.5 0.1 dme-miR-970-3p 7mer-A1 CTTATGA 3R 13312756 13312762 + 3R_13312756_13312762_+ 0.820918501 0.578752561 0.699835531 0.17123715 CG32473 FBtr0082742|FBtr0082743|FBtr0082744 13312627|13312627|13312627 13312785|13312785|13312785 3R + 13312738 13312767 3'utr CG32473 FlyBase G42559.1 AACGAAGAATTGTGATTGCTTATGATATTT 6 13312754 0.783158235 3 6 45 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3R:13312738-13312767 7 CG32473 FBtr0082744|FBtr0082743|FBtr0082742 13312627|13312627|13312627 13312785|13312785|13312785 CTTATGA 7mer-A1 dme-miR-970-3p 3R + 13312738 13312759 3'utr CG32473 FlyBase G32140.1 AACGAAGAATTGTGATTGCTTA 7 13312754 0.789544453 2 7 42 1 1.176091259 0 0.714285714 0.866666667 7 0 0 15 3R:13312738-13312759 4 6.5 3047 FBgn0052473 306.7266667 12.40666667 19.06 0.021191506 0.523911875 0.341028332 2 2 2 0.1 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 13368808 13368815 + 3R_13368808_13368815_+ 0.625355129 0.625356014 0.625355572 6.36E-07 Dic1 FBtr0346113 13368692 13369278 3R + 13368687 13368893 stop_codon Dic1 FlyBase G42565.1 GAATTAGCCGCGATGCCAATCGATACCTTAACTAGGCAATAATTCTCCTTGGCTGGCTGGCAGATTCCCTTGAGCAATGCAACATTCCAGCAGCAATTCGTTCACCGTGTAGAACATAACTTAGCTTTAGCCCGTTCCAGTTGTTAACCAAGATGCTTTTATGCTAGCAAAATATTTGTTGTTAAGCGTTCAATGCCCGCTATCCCG 214 13368807 0.938636262 25 212 1540 0.992125984 1.924279286 0.255905512 0.135514019 0.271653543 214 0 2 252 3R:13368687-13368893 8 Dic1 FBtr0082748|FBtr0082747|FBtr0346113 13368692|13368692|13368692 13369091|13369091|13369278 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R + 13368780 13368832 3'utr Dic1 FlyBase G32146.1 CAATTCGTTCACCGTGTAGAACATAACTTAGCTTTAGCCCGTTCCAGTTGTTA 112 13368807 0.797299998 6 108 746 0.98816568 2.222716471 0.26035503 0.392857143 0.597633136 112 2 0 167 3R:13368780-13368832 8 127 3048 FBgn0027610 272.8866667 21.36 32.8 0.465394669 5.945692884 3.87195122 1 1 1 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 13429312 13429319 - 3R_13429312_13429319_- 0.500112196 0.500115233 0.500113715 2.12E-06 yrt FBtr0114375|FBtr0114374|FBtr0114376|FBtr0082793 13428865|13428865|13428865|13428865 13429604|13429604|13430186|13429604 3R - 13429309 13429369 3'utr yrt FlyBase G50773.2 TATATCATATACACCGATGCGATATCGAGGAACGAAATGTGCTAAACCGTGTACTTAATAA 44 13429320 0.827045185 6 39 221 0.892857143 1.096910013 0.553571429 0.227272727 0.392857143 44 3 3 50 3R:13429309-13429369 8 yrt FBtr0114376|FBtr0082793|FBtr0114375|FBtr0114374 13428865|13428865|13428865|13428865 13430186|13429604|13429604|13429604 GTACTTAA 8mer-A1 dme-miR-252-5p 3R - 13429309 13429359 3'utr yrt FlyBase G38379.1 ACACCGATGCGATATCGAGGAACGAAATGTGCTAAACCGTGTACTTAATAA 28 13429320 0.803492703 5 26 135 0.977272727 1.633468456 0.727272727 0.464285714 0.659090909 28 1 0 43 3R:13429309-13429359 8 24.5 3049 FBgn0004049 300.3333333 8.753333333 13.46333333 0.081576027 2.79893374 1.819757366 1 1 1 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 13429388 13429393 - 3R_13429388_13429393_- 0.524494682 0.913657106 0.719075894 0.275179372 yrt FBtr0114375|FBtr0114374|FBtr0114376|FBtr0082793 13428865|13428865|13428865|13428865 13429604|13429604|13430186|13429604 3R - 13429375 13429504 3'utr yrt FlyBase G50774.1 TATCGTAGACAAACTTAGACGAGTTTTAAGCATTCCAAGCGAGAGCAACGACAAAAAGACAATGAGAGAGCAGGTCCAATCAAAAGCATACTGTCCCTAAATGTGCCTTAATGATCTATATTTATATACT 48 13429393 0.999991114 11 46 307 0.962264151 1.230448921 0.169811321 0.104166667 0.188679245 48 0 2 51 3R:13429375-13429504 6 yrt FBtr0114376|FBtr0082793|FBtr0114375|FBtr0114374 13428865|13428865|13428865|13428865 13430186|13429604|13429604|13429604 TGATCT 6mer3-8 dme-bantam-3p 3R - 13429377 13429477 3'utr yrt FlyBase G38380.1 AAGCATTCCAAGCGAGAGCAACGACAAAAAGACAATGAGAGAGCAGGTCCAATCAAAAGCATACTGTCCCTAAATGTGCCTTAATGATCTATATTTATATA 37 13429393 0.983671388 8 35 226 0.959183673 1.371067862 0.183673469 0.189189189 0.387755102 37 1 1 47 3R:13429377-13429477 6 22 3050 FBgn0004049 300.3333333 8.753333333 13.46333333 0.073251942 2.513328256 1.634067839 0 0 0 0.1 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 13429721 13429728 - 3R_13429721_13429728_- 0.631136268 0.631136245 0.631136257 7.07E-08 yrt FBtr0114376 13428865 13430186 3R - 13429603 13429761 stop_codon yrt FlyBase G50776.1 GAGCAATTATCCGGACAGCAGTCGCATTCCGTTTCCGTCCAGCAGCAACAGCAAAGACATGGTATCGCCCTGGCTGGTTTCCTCGGAGGTGGTATCGGCACCCAAGGGACGCGAGTCGGCCATCATTCGAAAATCCGTTATTACAACCCAGTTGTAATT 421 13429729 0.970743294 14 415 2392 0.985263158 1.971275849 0.170526316 0.116389549 0.216842105 421 3 4 468 3R:13429603-13429761 8 yrt FBtr0114376 13428865 13430186 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R - 13429659 13429767 3'utr yrt FlyBase G38382.1 AACTCCGAGCAATTATCCGGACAGCAGTCGCATTCCGTTTCCGTCCAGCAGCAACAGCAAAGACATGGTATCGCCCTGGCTGGTTTCCTCGGAGGTGGTATCGGCACCC 252 13429729 0.987630833 10 251 1384 0.997409326 2.284430734 0.170984456 0.396825397 0.606217617 252 0 1 385 3R:13429659-13429767 8 326 3051 FBgn0004049 300.3333333 8.753333333 13.46333333 1.085460599 37.24295506 24.21391434 1 1 1 0.1 dme-miR-965-3p 6mer3-8 TACGCT 3R 13635299 13635304 - 3R_13635299_13635304_- 0.950821178 0.533570221 0.7421957 0.295041012 sqd FBtr0309094|FBtr0082856 13634860|13635190 13636454|13636454 3R - 13635262 13635320 3'utr sqd FlyBase G50790.1 TTCCGGATATGTGTATTACGCTCATAGACTACATATATACATACATAATACATAATACA 40 13635305 0.669475145 5 38 313 0.954545455 1.62324929 0.136363636 0.1 0.181818182 40 2 0 42 3R:13635262-13635320 6 sqd FBtr0309094|FBtr0082856 13634860|13635190 13636454|13636454 TACGCT 6mer3-8 dme-miR-965-3p 3R - 13635257 13635317 3'utr sqd FlyBase G38391.1 CGGATATGTGTATTACGCTCATAGACTACATATATACATACATAATACATAATACATCTAT 14 13635296 0.980421074 5 13 98 0.952380952 1.301029996 0.142857143 0.357142857 0.571428571 14 1 0 20 3R:13635257-13635317 6 25 3052 FBgn0263396 13095.56667 400.09 616.6433333 0.001909043 0.062485941 0.040542075 1 -8 -3.5 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 3R 13635508 13635513 - 3R_13635508_13635513_- 0.999928102 0.999999998 0.99996405 5.08E-05 sqd FBtr0309094|FBtr0082856 13634860|13635190 13636454|13636454 3R - 13635464 13635531 3'utr sqd FlyBase G50791.1 AAACAAAAGAAGCAAGCATTGACTGGCTGGCACATCGGGTTGCCTTCTTCCCGTTCGATTGAGAAAAA 39 13635513 0.922067006 6 39 135 1 1.740362689 0.2 0.333333333 0.527272727 39 0 0 55 3R:13635464-13635531 6 sqd FBtr0309094|FBtr0082856 13634860|13635190 13636454|13636454 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 13635425 13635525 3'utr sqd FlyBase G38392.1 AAGAAGCAAGCATTGACTGGCTGGCACATCGGGTTGCCTTCTTCCCGTTCGATTGAGAAAAACTATATACGATATTCGATATACGATATACGACAAGACAC 23 13635512 0.951880423 9 23 102 1 1.544068044 0 0.347826087 0.571428571 23 0 0 35 3R:13635425-13635525 6 26 3053 FBgn0263396 13095.56667 400.09 616.6433333 0.001985405 0.064985378 0.042163758 0 -1 -0.5 0.1 dme-miR-14-3p 6mer2-7 AGACTG 3R 13636184 13636189 - 3R_13636184_13636189_- 0.999912675 0.999950666 0.99993167 2.69E-05 sqd FBtr0309094|FBtr0082856|FBtr0082857|FBtr0082855 13634860|13635190|13636041|13635697 13636454|13636454|13636454|13636454 3R - 13636161 13636212 3'utr sqd FlyBase G50795.2 AATGAGGAAAAAAGGAAATGAATAGACTGGCTGGCTGGGAGCAATAATATCA 378 13636190 0.83408203 6 368 1431 0.976798144 2.022222105 0.269141531 0.12962963 0.236658933 378 7 3 421 3R:13636161-13636212 6 sqd FBtr0082855|FBtr0082857|FBtr0309094|FBtr0082856 13635697|13636041|13634860|13635190 13636454|13636454|13636454|13636454 AGACTG 6mer2-7 dme-miR-14-3p 3R - 13636139 13636222 3'utr sqd FlyBase G38394.1 GTATGAAAGAAATGAGGAAAAAAGGAAATGAATAGACTGGCTGGCTGGGAGCAATAATATCAACATCAGCAACCTTAACACACC 222 13636190 0.938006933 6 214 831 0.973941368 2.475671188 0.25732899 0.306306306 0.498371336 222 8 0 299 3R:13636139-13636222 6 296.5 3054 FBgn0263396 13095.56667 400.09 616.6433333 0.02264125 0.741083256 0.480829004 1 1 1 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 3R 13639898 13639903 - 3R_13639898_13639903_- 0.798626309 0.790876123 0.794751216 0.005480219 sqd FBtr0082854 13637716 13642188 3R - 13639792 13639926 3'utr sqd FlyBase G50804.1 TGTTGTCAATGTGCGTCGACAATTTGACTGTATACCAATTATATATACATTTGTACATTTACATACACCTTTAATCATAAACTTTGAGTAAATTGTTTTACAAAGAAATTGCATGTTTCTCAATGTTTTTAGCAA 22 13639896 0.984377038 13 22 174 1 1.462397998 0.275862069 0.227272727 0.413793103 22 0 0 29 3R:13639792-13639926 6 sqd FBtr0082854 13637716 13642188 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 13639881 13639923 3'utr sqd FlyBase G38403.1 TGTCAATGTGCGTCGACAATTTGACTGTATACCAATTATATAT 20 13639902 0.962089656 5 17 137 0.928571429 1.414973348 0.428571429 0.4 0.571428571 20 2 0 26 3R:13639881-13639923 6 15.5 3055 FBgn0263396 13095.56667 400.09 616.6433333 0.001183607 0.038741283 0.025136086 -7 -1 -4 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 3R 13640404 13640410 - 3R_13640404_13640410_- 0.620203551 0.620204266 0.620203908 4.95E-07 sqd FBtr0082854 13637716 13642188 3R - 13640378 13640472 3'utr sqd FlyBase G50806.1 ACCACTGCTGCAGCACCCCCCCGCAGCCTCATTCGTTAGATCGTTCTTTTATTTGCTTTATTTGCATTTCCGCTGCACTTTCTTGACCAAAACGT 26 13640411 0.930024362 10 25 268 0.939393939 1.491361694 0.303030303 0.230769231 0.393939394 26 2 0 31 3R:13640378-13640472 7 sqd FBtr0082854 13637716 13642188 TGCATTT 7mer-m8 dme-miR-277-3p 3R - 13640393 13640430 3'utr sqd FlyBase G38407.1 GTTCTTTTATTTGCTTTATTTGCATTTCCGCTGCACTT 7 13640412 0.646496213 5 7 88 1 1 0.6 0.428571429 0.6 7 0 0 10 3R:13640393-13640430 7 12.5 3056 FBgn0263396 13095.56667 400.09 616.6433333 0.000954522 0.03124297 0.020271037 1 2 1.5 0.1 dme-miR-33-5p 7mer-m8 CAATGCA 3R 13640735 13640741 - 3R_13640735_13640741_- 0.673479089 0.671089391 0.67228424 0.001689773 sqd FBtr0082854 13637716 13642188 3R - 13640728 13640779 3'utr sqd FlyBase G50809.1 TTATTATTCCGGCAACGGGATAATATTCACGTTCTTTGCAATGCATATGTTT 7 13640734 0.892321635 5 6 64 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 3R:13640728-13640779 7 sqd FBtr0082854 13637716 13642188 CAATGCA 7mer-m8 dme-miR-33-5p 3R - 13640720 13640752 3'utr sqd FlyBase G38410.1 CACGTTCTTTGCAATGCATATGTTTTCGTATGC 8 13640745 0.686614291 6 7 63 0.833333333 1 0 0.5 0.666666667 8 2 0 10 3R:13640720-13640752 7 6 3057 FBgn0263396 13095.56667 400.09 616.6433333 0.00045817 0.014996626 0.009730098 -7 4 -1.5 0.1 dme-miR-79-3p 6mer2-7 AGCTTT 3R 13640847 13640852 - 3R_13640847_13640852_- 1 0.995423919 0.997711959 0.003235791 sqd FBtr0082854 13637716 13642188 3R - 13640785 13640869 3'utr sqd FlyBase G50810.1 ACGAAACGCGTAATCAAAGCTTTGATTCAATGTCTATTTAAATATATATATACCTTATATATAGCATATAAATATATTTTTAGAT 22 13640844 0.982584461 9 21 164 0.964285714 1.130333768 0.714285714 0.272727273 0.428571429 22 0 1 27 3R:13640785-13640869 6 sqd FBtr0082854 13637716 13642188 AGCTTT 6mer2-7 dme-miR-79-3p 3R - 13640780 13640862 3'utr sqd FlyBase G38411.1 GCGTAATCAAAGCTTTGATTCAATGTCTATTTAAATATATATATACCTTATATATAGCATATAAATATATTTTTAGATACATA 13 13640844 0.980723928 8 13 98 1 1.342422681 0.636363636 0.384615385 0.636363636 13 0 0 22 3R:13640780-13640862 6 13.5 3058 FBgn0263396 13095.56667 400.09 616.6433333 0.001030883 0.033742408 0.02189272 -8 -8 -8 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 13641265 13641271 - 3R_13641265_13641271_- 0.823349256 0.823349178 0.823349217 7.07E-08 sqd FBtr0082854 13637716 13642188 3R - 13641254 13641294 3'utr sqd FlyBase G50812.1 CTTGGTTGCCTTCAACAGACTTTCCAAAGATGACAAATACC 14 13641273 0.673489021 4 14 59 1 1.278753601 0.052631579 0.214285714 0.421052632 14 0 0 19 3R:13641254-13641294 7 sqd FBtr0082854 13637716 13642188 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 13641247 13641285 3'utr sqd FlyBase G38414.1 CTTCAACAGACTTTCCAAAGATGACAAATACCTCAAACG 8 13641273 0.912057784 3 8 26 1 1.204119983 0.1875 0.375 0.6875 8 0 0 16 3R:13641247-13641285 7 10.5 3059 FBgn0263396 13095.56667 400.09 616.6433333 0.000801798 0.026244095 0.017027671 2 2 2 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 13641551 13641556 - 3R_13641551_13641556_- 0.999991496 0.932096533 0.966044015 0.048009015 sqd FBtr0082854 13637716 13642188 3R - 13641530 13641601 3'utr sqd FlyBase G50815.1 CGTATAATTTTAAAGGCATATAATTGATGTTTAAAATTTTAAAGCGTACCTTTTAAACGAGAATTCATTTAA 18 13641549 0.988309901 10 18 162 1 1.278753601 0.157894737 0.055555556 0.105263158 18 0 0 19 3R:13641530-13641601 6 sqd FBtr0082854 13637716 13642188 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 13641528 13641575 3'utr sqd FlyBase G38417.1 ATGTTTAAAATTTTAAAGCGTACCTTTTAAACGAGAATTCATTTAAAC 15 13641549 0.985735769 5 13 116 0.958333333 1.361727836 0 0.466666667 0.666666667 15 1 0 23 3R:13641528-13641575 6 14 3060 FBgn0263396 13095.56667 400.09 616.6433333 0.001069064 0.034992127 0.022703562 -7 -7 -7 0.1 dme-miR-190-5p 6mer3-8 ACATAT 3R 13641738 13641743 - 3R_13641738_13641743_- 1 0.991695614 0.995847807 0.005872098 sqd FBtr0082854 13637716 13642188 3R - 13641739 13641806 3'utr sqd FlyBase G50816.1 AAGAAAACTTTTAAAAATTGTAGATTTGAAAGAGAGAAAACAAGAAACATTTCTTTAATGCTAACATA 23 13641755 0.756252367 10 23 147 1 1.447158031 0.035714286 0.173913043 0.321428571 23 0 0 28 3R:13641739-13641806 4 sqd FBtr0082854 13637716 13642188 ACATAT 6mer3-8 dme-miR-190-5p 3R - 13641722 13641806 3'utr sqd FlyBase G38418.1 AAGAAAACTTTTAAAAATTGTAGATTTGAAAGAGAGAAAACAAGAAACATTTCTTTAATGCTAACATATAAATTTTAATCTAATC 15 13641756 0.972085511 9 15 91 1 1.380211242 0.125 0.4 0.625 15 0 0 24 3R:13641722-13641806 6 3 3061 FBgn0263396 13095.56667 400.09 616.6433333 0.000229085 0.007498313 0.004865049 12 13 12.5 0.1 dme-miR-7-5p 7mer-A1 TCTTCCA 3R 13651681 13651687 + 3R_13651681_13651687_+ 0.817933905 0.804096793 0.811015349 0.009784307 rin FBtr0346347|FBtr0082797|FBtr0082799|FBtr0346346 13651565|13651565|13651565|13651565 13654527|13652413|13652413|13652413 3R + 13651596 13651734 3'utr rin FlyBase G42600.1 AAAGCATCAACAAATGAGCAACGGCAGCAGTAGCGACTATAACATCAAGAACAGCAGCAACAACCCAACGTTAAAAACATCGACTTCTTCCACAATGCAATCAATCAATTACATTCAAGAACATCTCATGCAATTAAAC 68 13651683 0.952372698 13 64 291 0.951219512 1.591064607 0.036585366 0.191176471 0.329268293 68 3 1 78 3R:13651596-13651734 7 rin FBtr0082799|FBtr0346346|FBtr0346347|FBtr0082797 13651565|13651565|13651565|13651565 13652413|13652413|13654527|13652413 TCTTCCA 7mer-A1 dme-miR-7-5p 3R + 13651642 13651772 3'utr rin FlyBase G32182.2 AAGAACAGCAGCAACAACCCAACGTTAAAAACATCGACTTCTTCCACAATGCAATCAATCAATTACATTCAAGAACATCTCATGCAATTAAACACACGCAAATCACACACTCATACACTAAGATAAAGTAG 40 13651683 0.956057617 15 37 191 0.933333333 1.748188027 0.066666667 0.325 0.55 40 4 0 56 3R:13651642-13651772 7 24 3062 FBgn0015778 4641.9 120.1133333 185.17 0.005170297 0.199811289 0.129610628 -2 -2 -2 0.1 dme-miR-92b-3p 7mer-m1 TGCAATT 3R 13651724 13651730 + 3R_13651724_13651730_+ 0.666454787 0.765142982 0.715798884 0.069783095 rin FBtr0346347|FBtr0082797|FBtr0082799|FBtr0346346 13651565|13651565|13651565|13651565 13654527|13652413|13652413|13652413 3R + 13651596 13651734 3'utr rin FlyBase G42600.1 AAAGCATCAACAAATGAGCAACGGCAGCAGTAGCGACTATAACATCAAGAACAGCAGCAACAACCCAACGTTAAAAACATCGACTTCTTCCACAATGCAATCAATCAATTACATTCAAGAACATCTCATGCAATTAAAC 68 13651724 0.952372698 13 64 291 0.951219512 1.591064607 0.036585366 0.191176471 0.329268293 68 3 1 78 3R:13651596-13651734 7 rin FBtr0082799|FBtr0346346|FBtr0346347|FBtr0082797 13651565|13651565|13651565|13651565 13652413|13652413|13654527|13652413 TGCAATT 7mer-m1 dme-miR-92b-3p 3R + 13651642 13651772 3'utr rin FlyBase G32182.2 AAGAACAGCAGCAACAACCCAACGTTAAAAACATCGACTTCTTCCACAATGCAATCAATCAATTACATTCAAGAACATCTCATGCAATTAAACACACGCAAATCACACACTCATACACTAAGATAAAGTAG 40 13651724 0.956057617 15 37 191 0.933333333 1.748188027 0.066666667 0.325 0.55 40 4 0 56 3R:13651642-13651772 7 15 3063 FBgn0015778 4641.9 120.1133333 185.17 0.003231435 0.124882056 0.081006643 0 0 0 0.1 dme-miR-276a-3p 6mer2-7 GTTCCT 3R 13651808 13651813 + 3R_13651808_13651813_+ 1 0.999999977 0.999999989 0 rin FBtr0346347|FBtr0082797|FBtr0082799|FBtr0346346 13651565|13651565|13651565|13651565 13654527|13652413|13652413|13652413 3R + 13651785 13651825 3'utr rin FlyBase G42601.1 AAAACGTCAACTGTCCTTTAAATGTTCCTGAGCGCAACTCT 17 13651806 0.685274808 4 14 127 0.80952381 1.230448921 0.19047619 0.235294118 0.380952381 17 4 0 17 3R:13651785-13651825 6 rin FBtr0082799|FBtr0346346|FBtr0346347|FBtr0082797 13651565|13651565|13651565|13651565 13652413|13652413|13654527|13652413 GTTCCT 6mer2-7 dme-miR-276a-3p 3R + 13651785 13651825 3'utr rin FlyBase G32183.1 AAAACGTCAACTGTCCTTTAAATGTTCCTGAGCGCAACTCT 21 13651806 0.728463717 4 18 142 0.806451613 0.795880017 0.193548387 0.380952381 0.580645161 21 3 3 25 3R:13651785-13651825 6 14.5 3064 FBgn0015778 4641.9 120.1133333 185.17 0.003123721 0.120719321 0.078306421 2 2 2 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3R 13652792 13652797 + 3R_13652792_13652797_+ 0.999940545 0.997888181 0.998914363 0.001451195 rin FBtr0346347 13651565 13654527 3R + 13652756 13652832 3'utr rin FlyBase G42608.1 AAACCTTTTGCTACTTAAATCTAATTTGCAGACTAGCTAGTCTATATAGGTATCGTATCGGTTCGAAACGGTTCGGT 10 13652799 0.985772016 6 9 77 1 1.041392685 0.181818182 0.1 0.181818182 10 0 0 11 3R:13652756-13652832 6 rin FBtr0346347 13651565 13654527 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3R + 13652736 13652819 3'utr rin FlyBase G32190.1 CGCCGCATTTTAGAGCCTGTAAACCTTTTGCTACTTAAATCTAATTTGCAGACTAGCTAGTCTATATAGGTATCGTATCGGTTC 8 13652764 0.982417017 7 7 60 1 0.954242509 0.111111111 0.125 0.222222222 8 0 0 9 3R:13652736-13652819 6 4.5 3065 FBgn0015778 4641.9 120.1133333 185.17 0.000969431 0.037464617 0.024301993 -7 28 10.5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 13653020 13653025 + 3R_13653020_13653025_+ 0.943618254 0.999999993 0.971809124 0.039867882 rin FBtr0346347 13651565 13654527 3R + 13652990 13653036 3'utr rin FlyBase G42610.1 TCGTTCTGTGTAATAAGTTCAAGGTCGTAAACCAAACTAAGTCAAGC 7 13653003 0.788770709 2 6 43 0.888888889 0.903089987 0 0.142857143 0.333333333 7 1 0 8 3R:13652990-13653036 6 rin FBtr0346347 13651565 13654527 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 13652992 13653087 3'utr rin FlyBase G32191.1 GTTCTGTGTAATAAGTTCAAGGTCGTAAACCAAACTAAGTCAAGCAACTTAAACGATTTGGTGTTTCCAACGCAGTTGTGAACTAAAATTTAGTAC 13 13653017 0.962645126 8 12 68 0.954545455 1.322219295 0.181818182 0.461538462 0.681818182 13 1 0 21 3R:13652992-13653087 6 6.5 3066 FBgn0015778 4641.9 120.1133333 185.17 0.001400289 0.054115558 0.035102878 17 3 10 0.1 dme-miR-995-5p 6mer3-8 AATTCG 3R 13657907 13657912 - 3R_13657907_13657912_- 0.999999102 0.999997749 0.999998426 9.90E-07 Hrb87F FBtr0300590|FBtr0082851|FBtr0334495 13657793|13657322|13656844 13658466|13658466|13658466 3R - 13657853 13657941 3'utr Hrb87F FlyBase G50834.1 GCTGCTATCTCTCTTTTGTAACCATTAATAATTCGCTGATCGATTTATGTTTAGGGTCCTAAGAACCCCGAACGCTTAGTTTTAACCAT 29 13657897 0.989395087 13 27 255 0.931034483 1.431363764 0.172413793 0 0 29 2 0 27 3R:13657853-13657941 6 Hrb87F FBtr0334495|FBtr0300590|FBtr0082851 13656844|13657793|13657322 13658466|13658466|13658466 AATTCG 6mer3-8 dme-miR-995-5p 3R - 13657883 13657915 3'utr Hrb87F FlyBase G38431.2 AATAATTCGCTGATCGATTTATGTTTAGGGTCC 7 13657895 0.649953509 4 6 59 0.916666667 1.041392685 0 0.428571429 0.666666667 7 1 0 11 3R:13657883-13657915 6 11.5 3067 FBgn0004237 959.7066667 53.14666667 81.73 0.011982828 0.216382338 0.140707207 -15 -17 -16 0.1 dme-miR-304-5p 6mer2-7 GAGATT 3R 13663476 13663481 + 3R_13663476_13663481_+ 0.99983815 0.99988156 0.999859855 3.08E-05 B52 FBtr0300588|FBtr0082804 13663107|13663107 13666891|13666891 3R + 13663458 13663505 stop_codon B52 FlyBase G42618.1 TTGATGTGCTTTGACTGAGAGATTCCCTCCTCGGCTTGGGGCCGAATC 16 13663480 0.813463016 3 14 103 0.913043478 1.322219295 0 0.375 0.565217391 16 2 0 21 3R:13663458-13663505 6 B52 FBtr0082804|FBtr0300588 13663107|13663107 13666891|13666891 GAGATT 6mer2-7 dme-miR-304-5p 3R + 13663453 13663505 stop_codon B52 FlyBase G32198.1 AGAGTTTGATGTGCTTTGACTGAGAGATTCCCTCCTCGGCTTGGGGCCGAATC 11 13663480 0.97292806 3 11 70 1 1.230448921 0.352941176 0.363636364 0.588235294 11 0 0 17 3R:13663453-13663505 6 13 3068 FBgn0004587 2711.693333 191.7166667 292.1666667 0.004794052 0.067808398 0.044495151 -4 -4 -4 0.1 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 13663539 13663545 + 3R_13663539_13663545_+ 0.774326748 0.762092571 0.768209659 0.008650815 B52 FBtr0300588|FBtr0082804|FBtr0300586|FBtr0082803 13663107|13663107|13663474|13663474 13666891|13666891|13666891|13666891 3R + 13663518 13663557 5'utr B52 FlyBase G42619.1 AGAATCAAATCTAATTGAATCGCTGTGAGAAAGACAAGCT 7 13663535 0.964573348 3 6 31 0.857142857 0.77815125 0 0 0 7 1 0 6 3R:13663518-13663557 7 B52 FBtr0082803|FBtr0300586|FBtr0082804|FBtr0300588 13663474|13663474|13663107|13663107 13666891|13666891|13666891|13666891 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R + 13663513 13663584 5'utr B52 FlyBase G32199.1 GAAAGAGAATCAAATCTAATTGAATCGCTGTGAGAAAGACAAGCTAGTCTAGTGACCGACCGACCGGTTCAG 8 13663534 0.945741218 4 7 35 0.923076923 0.77815125 0.307692308 0.25 0.538461538 8 0 1 12 3R:13663513-13663584 7 5.5 3069 FBgn0004587 2711.693333 191.7166667 292.1666667 0.002028253 0.028688168 0.018824872 4 5 4.5 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3R 13675253 13675259 - 3R_13675253_13675259_- 0.521011217 0.521125808 0.521068513 8.10E-05 CG9588 FBtr0082849 13675090 13675502 3R - 13675114 13675292 3'utr CG9588 FlyBase G50842.1 AAGGTGCACAGGTGACAGGCAAAAGGATGATATTGTGATTCGGTGGATTCTGTCGACATGACCGATTTTTTTTGCATTTAATTTTCATTCAATATGAAATGATGCGTAACAAAATGATGAGGCGGTTTTACTAACAAATAAGTTTTTATAGCGCTTTTACTGGTAAATAAAGAAGGATA 169 13675260 0.902794834 20 160 1327 0.940594059 1.433655561 0.361386139 0.159763314 0.297029703 169 6 6 190 3R:13675114-13675292 7 CG9588 FBtr0082849 13675090 13675502 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 13675208 13675276 3'utr CG9588 FlyBase G38439.1 AGGCAAAAGGATGATATTGTGATTCGGTGGATTCTGTCGACATGACCGATTTTTTTTGCATTTAATTTT 115 13675260 0.692813686 10 108 891 0.941176471 1.505149978 0.294117647 0.365217391 0.570588235 115 6 4 160 3R:13675208-13675276 7 111 3070 FBgn0038166 196.9933333 19.93666667 30.61666667 0.563470845 5.567630831 3.62547632 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 13692361 13692366 + 3R_13692361_13692366_+ 0.999273897 0.998716316 0.998995106 0.000394283 flfl FBtr0114604|FBtr0114604|FBtr0114604 13691732|13691732|13691732 13693905|13693905|13693905 3R + 13692346 13692424 3'utr flfl FlyBase G42665.1 ATGAGTTAACAGATCCTGTGAAGTTGGCTGCTGGCCCAGAATGTTTGTGCAATACTTTCGTGTCGATATTTAAATAACA 11 13692370 0.983799174 5 10 89 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 3R:13692346-13692424 6 flfl FBtr0114604|FBtr0114604|FBtr0114604 13691732|13691732|13691732 13693905|13693905|13693905 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 13692328 13692405 3'utr flfl FlyBase G32232.1 TCTATCGTATGAGATCGTATGAGTTAACAGATCCTGTGAAGTTGGCTGCTGGCCCAGAATGTTTGTGCAATACTTTCG 9 13692390 0.981659948 7 9 66 1 1.113943352 0.384615385 0.333333333 0.538461538 9 0 0 13 3R:13692328-13692405 6 6 3071 FBgn0024555 2089.806667 50.89333333 77.96333333 0.002871079 0.117893634 0.076959254 -9 -29 -19 0.1 dme-miR-34-5p 6mer2-7 ACTGCC 3R 13692856 13692861 + 3R_13692856_13692861_+ 0.63983411 0.649026469 0.644430289 0.006500008 flfl FBtr0114604 13691732 13693905 3R + 13692778 13692882 3'utr flfl FlyBase G42667.1 GAGTTAAATGCAGATAACACTTGAACCCAATGAACCTTGTATATAATTTAGTCACTCTCAATGCGCGATTAGTTGATAACTGCCCTTGCACCACTGACGCCGACA 17 13692864 0.975233214 11 15 94 0.925925926 1.397940009 0.111111111 0.411764706 0.62962963 17 2 0 25 3R:13692778-13692882 6 flfl FBtr0114604 13691732 13693905 ACTGCC 6mer2-7 dme-miR-34-5p 3R + 13692783 13692877 3'utr flfl FlyBase G32233.1 AAATGCAGATAACACTTGAACCCAATGAACCTTGTATATAATTTAGTCACTCTCAATGCGCGATTAGTTGATAACTGCCCTTGCACCACTGACGC 16 13692856 0.974059463 9 14 95 0.916666667 1.342422681 0.041666667 0.375 0.583333333 16 2 0 22 3R:13692783-13692877 6 5.5 3072 FBgn0024555 2089.806667 50.89333333 77.96333333 0.002631822 0.108069164 0.070545983 -8 0 -4 0.1 dme-miR-283-5p 6mer3-8 TGATAT 3R 13693724 13693729 + 3R_13693724_13693729_+ 0.99999887 1 0.999999435 7.78E-07 flfl FBtr0114604 13691732 13693905 3R + 13693671 13693771 3'utr flfl FlyBase G42672.1 AGCGACAACACTATAGTTTATACATAGTATTTATATGAATCGTGTATTGTATATGATATGCTGTCTAATCCCTAATCCTAACACATACCCATTACGTCTAT 15 13693729 0.987087292 8 15 133 1 1.204119983 0.0625 0.066666667 0.125 15 0 0 16 3R:13693671-13693771 6 flfl FBtr0114604 13691732 13693905 TGATAT 6mer3-8 dme-miR-283-5p 3R + 13693706 13693773 3'utr flfl FlyBase G32239.1 TGAATCGTGTATTGTATATGATATGCTGTCTAATCCCTAATCCTAACACATACCCATTACGTCTATAA 16 13693728 0.84123054 8 13 133 0.92 1.361727836 0.08 0.4375 0.64 16 2 0 23 3R:13693706-13693773 6 11 3073 FBgn0024555 2089.806667 50.89333333 77.96333333 0.005263645 0.216138329 0.141091966 -5 -4 -4.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3R 13695333 13695338 - 3R_13695333_13695338_- 0.999594922 0.772066422 0.885830672 0.160886945 f-cup FBtr0334528|FBtr0112938|FBtr0334526|FBtr0112937|FBtr0082846|FBtr0334527|FBtr0112939|FBtr0334529|FBtr0082847 13695261|13695261|13695261|13695261|13695261|13695261|13695261|13695261|13695261 13696283|13696440|13695536|13696437|13695536|13695536|13695536|13696437|13695536 3R - 13695321 13695362 3'utr f-cup FlyBase G50860.1 CACACCGTGCATCAACCAACCAAACTAGTCTGCATGCCACAA 15 13695333 0.664924715 3 15 45 1 1.397940009 0 0.466666667 0.68 15 0 0 25 3R:13695321-13695362 6 f-cup FBtr0082847|FBtr0334529|FBtr0112939|FBtr0334527|FBtr0082846|FBtr0112937|FBtr0334526|FBtr0112938|FBtr0334528 13695261|13695261|13695261|13695261|13695261|13695261|13695261|13695261|13695261 13695536|13696437|13695536|13695536|13695536|13696437|13695536|13696440|13696283 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3R - 13695288 13695349 3'utr f-cup FlyBase G38451.1 AACCAACCAAACTAGTCTGCATGCCACAATACCTAATGCACGTTGTTAATCCTGGCTGAGTA 7 13695332 0.937317986 4 7 31 1 1.146128036 0 0.428571429 0.714285714 7 0 0 14 3R:13695288-13695349 6 10 3074 FBgn0028487 197.9333333 9.903333333 15.26 0.050522061 1.009761023 0.655307995 -5 -6 -5.5 0.1 dme-miR-184-3p 7mer-m8 TCCGTCC 3R 13838462 13838468 - 3R_13838462_13838468_- 0.661610278 0.661586542 0.66159841 1.68E-05 CG31495 FBtr0082882|FBtr0344765 13838238|13838433 13838773|13838773 3R - 13838435 13838479 3'utr CG31495 FlyBase G50877.1 ACGGAGAGCATTCCGTCCTCCAGGAGTTCGGTGACCGGTGGGCCC 16 13838469 0.957978414 3 15 79 0.947368421 1.255272505 0.157894737 0.1875 0.315789474 16 1 0 18 3R:13838435-13838479 7 CG31495 FBtr0344765|FBtr0082882 13838433|13838238 13838773|13838773 TCCGTCC 7mer-m8 dme-miR-184-3p 3R - 13838446 13838479 3'utr CG31495 FlyBase G38461.1 ACGGAGAGCATTCCGTCCTCCAGGAGTTCGGTGA 11 13838469 0.934862986 2 11 57 1 1.176091259 0.4 0.272727273 0.466666667 11 0 0 15 3R:13838446-13838479 7 13 3075 FBgn0051495 85.87 7.076666667 10.89333333 0.151391639 1.837023081 1.193390453 1 1 1 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3R 13838559 13838565 - 3R_13838559_13838565_- 0.443131017 0.443130692 0.443130854 2.12E-07 CG31495 FBtr0082882|FBtr0344765 13838238|13838433 13838773|13838773 3R - 13838545 13838582 3'utr CG31495 FlyBase G50878.1 AATGAACAGCCCGATAATGTGATTGCAAAGATACTAGA 12 13838559 0.70531292 3 11 70 0.916666667 1.041392685 0.166666667 0 0 12 1 0 11 3R:13838545-13838582 7 CG31495 FBtr0344765|FBtr0082882 13838433|13838238 13838773|13838773 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 13838545 13838581 3'utr CG31495 FlyBase G38462.1 ATGAACAGCCCGATAATGTGATTGCAAAGATACTAGA 15 13838559 0.763889428 3 14 84 0.92 1.361727836 0 0.533333333 0.72 15 2 0 23 3R:13838545-13838581 7 13.5 3076 FBgn0051495 85.87 7.076666667 10.89333333 0.157214394 1.907677814 1.239290086 -6 -6 -6 0.1 dme-miR-11-3p 7mer-m1 TGTGATG 3R 13968379 13968385 - 3R_13968379_13968385_- 0.612070551 0.612063211 0.612066881 5.23E-06 rdx FBtr0334298|FBtr0301632|FBtr0301634|FBtr0100361 13967059|13967953|13967953|13967953 13969185|13969185|13969185|13969185 3R - 13968349 13968408 3'utr rdx FlyBase G50886.1 AATTACAAAGCGTACACTTTGATTGTGATGTATATTCGATGAGTATGACTAATGAGTAAC 39 13968386 0.890507163 9 36 344 0.94 1.194976603 0.24 0.256410256 0.42 39 1 2 47 3R:13968349-13968408 7 rdx FBtr0301634|FBtr0100361|FBtr0301632|FBtr0334298 13967953|13967953|13967953|13967059 13969185|13969185|13969185|13969185 TGTGATG 7mer-m1 dme-miR-11-3p 3R - 13968349 13968408 3'utr rdx FlyBase G38468.1 AATTACAAAGCGTACACTTTGATTGTGATGTATATTCGATGAGTATGACTAATGAGTAAC 27 13968386 0.987803012 10 27 264 1 1.579783597 0.157894737 0.37037037 0.552631579 27 0 0 38 3R:13968349-13968408 7 29 3077 FBgn0264493 1241.27 56.45333333 86.81 0.023363168 0.51369863 0.334062896 1 1 1 0.1 dme-miR-33-5p 7mer-A1 AATGCAA 3R 13968850 13968856 - 3R_13968850_13968856_- 0.781843508 0.742627253 0.76223538 0.027730041 rdx FBtr0334298|FBtr0301632|FBtr0301633|FBtr0301634|FBtr0100361 13967059|13967953|13968623|13967953|13967953 13969185|13969185|13969185|13969185|13969185 3R - 13968810 13968875 3'utr rdx FlyBase G50889.1 ATGTTAAACGCAGACAGATAATGCAAATGCAGGAGCAAAAGCATAGCGAGCCGTACCGTTTATTGT 46 13968857 0.838817188 7 45 117 0.980769231 1.707570176 0.192307692 0.108695652 0.211538462 46 1 0 51 3R:13968810-13968875 7 rdx FBtr0301634|FBtr0100361|FBtr0301632|FBtr0301633|FBtr0334298 13967953|13967953|13967953|13968623|13967059 13969185|13969185|13969185|13969185|13969185 AATGCAA 7mer-A1 dme-miR-33-5p 3R - 13968812 13968870 3'utr rdx FlyBase G38470.1 AAACGCAGACAGATAATGCAAATGCAGGAGCAAAAGCATAGCGAGCCGTACCGTTTATT 16 13968857 0.849053774 4 16 38 1 1.342422681 0.227272727 0.3125 0.5 16 0 0 22 3R:13968812-13968870 7 27.5 3078 FBgn0264493 1241.27 56.45333333 86.81 0.022154729 0.487128011 0.316783781 1 1 1 0.1 dme-miR-307a-3p 7mer-m8 GGTTGTG 3R 14034560 14034566 + 3R_14034560_14034566_+ 0.700254781 0.702965263 0.701610022 0.001916613 CG3061 FBtr0082869 14034491 14035041 3R + 14034496 14034615 3'utr CG3061 FlyBase G42701.1 AGTTAATGCTATCACACGAAAAGCTACTCCTCAAATCCACCACTATTTGAAACCTTAACTGCTGGGTTGTGTAGTTATTGCATATTTTGCTTTAGTTGTTATAAATGAATTTCATTGTCT 21 14034573 0.991038884 15 18 177 0.913043478 1.021189299 0.217391304 0.095238095 0.173913043 21 1 1 21 3R:14034496-14034615 7 CG3061 FBtr0082869 14034491 14035041 GGTTGTG 7mer-m8 dme-miR-307a-3p 3R + 14034545 14034579 3'utr CG3061 FlyBase G32265.2 AAACCTTAACTGCTGGGTTGTGTAGTTATTGCATA 5 14034564 0.530392835 3 3 41 0.8 0.903089987 0.3 0.8 0.9 5 2 0 8 3R:14034545-14034579 7 5 3079 FBgn0038195 1209.576667 74.17333333 113.5466667 0.004133678 0.067409671 0.044034758 -13 -4 -8.5 0.1 dme-miR-283-5p 6mer2-7 GATATT 3R 14034972 14034977 + 3R_14034972_14034977_+ 0.999987774 0.665464576 0.832726175 0.236543623 CG3061 FBtr0082869 14034491 14035041 3R + 14034945 14034998 3'utr CG3061 FlyBase G42705.1 AAGGACACGGAACGCATGGGCAGTGGCGATATTCTGAATAAAATTGCAAGTTAT 19 14034961 0.938306195 5 18 72 0.952380952 1.301029996 0.095238095 0.105263158 0.19047619 19 1 0 20 3R:14034945-14034998 6 CG3061 FBtr0082869 14034491 14035041 GATATT 6mer2-7 dme-miR-283-5p 3R + 14034945 14034985 3'utr CG3061 FlyBase G32268.1 AAGGACACGGAACGCATGGGCAGTGGCGATATTCTGAATAA 13 14034961 0.904170348 3 11 33 0.9 1.255272505 0.3 0.461538462 0.65 13 2 0 18 3R:14034945-14034985 6 10 3080 FBgn0038195 1209.576667 74.17333333 113.5466667 0.008267355 0.134819342 0.088069516 11 11 11 0.1 dme-miR-14-3p 6mer3-8 AAGACT 3R 14035061 14035066 - 3R_14035061_14035066_- 0.810064764 0.830385557 0.82022516 0.014368975 CG9922 FBtr0082870|FBtr0334297 14035016|14035016 14035179|14035179 3R - 14035047 14035079 3'utr CG9922 FlyBase G50908.1 AATACAAAACAAAAAGACTTTTAAGCCCACAAA 12 14035059 0.907020138 3 12 36 1 1.146128036 0 0.166666667 0.285714286 12 0 0 14 3R:14035047-14035079 6 CG9922 FBtr0082870|FBtr0334297 14035016|14035016 14035179|14035179 AAGACT 6mer3-8 dme-miR-14-3p 3R - 14035049 14035096 3'utr CG9922 FlyBase G38484.1 ACTCTAGCGAAGAAAACAATACAAAACAAAAAGACTTTTAAGCCCACA 7 14035059 0.961062786 2 6 18 0.9 0.954242509 0 0.285714286 0.5 7 1 0 9 3R:14035049-14035096 6 8.5 3081 FBgn0038196 1010.823333 215.7 334.3833333 0.008408987 0.039406583 0.025419927 -7 -7 -7 0.1 dme-miR-965-3p 6mer3-8 TACGCT 3R 14119310 14119315 - 3R_14119310_14119315_- 0.999874679 0.999638662 0.999756671 0.000166877 Abi FBtr0112896|FBtr0337096|FBtr0082910|FBtr0337097|FBtr0307077|FBtr0307076 14119260|14119260|14119260|14119260|14119260|14119260 14120064|14120064|14120064|14120064|14120064|14120064 3R - 14119295 14119329 3'utr Abi FlyBase G50912.1 AATACAAGTACACATACGCTCTATATGGTAAAAAT 24 14119315 0.90643634 3 23 137 0.888888889 1.380211242 0 0.083333333 0.185185185 24 3 0 24 3R:14119295-14119329 6 Abi FBtr0307077|FBtr0307076|FBtr0082910|FBtr0337097|FBtr0112896|FBtr0337096 14119260|14119260|14119260|14119260|14119260|14119260 14120064|14120064|14120064|14120064|14120064|14120064 TACGCT 6mer3-8 dme-miR-965-3p 3R - 14119294 14119350 3'utr Abi FlyBase G38486.1 AGGAATCAAATTAAATTAAACAATACAAGTACACATACGCTCTATATGGTAAAAATA 16 14119315 0.95948439 5 14 73 0.928571429 1.414973348 0.071428571 0.4375 0.678571429 16 2 0 26 3R:14119294-14119350 6 19 3082 FBgn0020510 1356.63 69.31 106.3 0.014005293 0.274130717 0.178739417 0 0 0 0.1 dme-miR-283-5p 6mer3-8 TGATAT 3R 14119533 14119538 - 3R_14119533_14119538_- 0.999951314 0.999999999 0.999975656 3.44E-05 Abi FBtr0112896|FBtr0337096|FBtr0082910|FBtr0337097|FBtr0307077|FBtr0307076 14119260|14119260|14119260|14119260|14119260|14119260 14120064|14120064|14120064|14120064|14120064|14120064 3R - 14119486 14119587 3'utr Abi FlyBase G50913.2 AAATATTTGCTCACAGTTTTATCAAGCGATTTCTGTTTGCCTTGCGCTTTGATATGCCCGGCTATTATACACCAATACTACCCGAACCTATGCCCCCAGCAA 33 14119533 0.939595014 10 30 221 0.897435897 1.06694679 0.230769231 0.181818182 0.307692308 33 2 2 35 3R:14119486-14119587 6 Abi FBtr0307077|FBtr0307076|FBtr0082910|FBtr0337097|FBtr0112896|FBtr0337096 14119260|14119260|14119260|14119260|14119260|14119260 14120064|14120064|14120064|14120064|14120064|14120064 TGATAT 6mer3-8 dme-miR-283-5p 3R - 14119458 14119556 3'utr Abi FlyBase G38487.1 TCTGTTTGCCTTGCGCTTTGATATGCCCGGCTATTATACACCAATACTACCCGAACCTATGCCCCCAGCAATACTGTAGGTTATATAAATTTCAGTTAG 11 14119533 0.988293534 7 10 89 0.933333333 1.146128036 0.2 0.363636364 0.533333333 11 1 0 14 3R:14119458-14119556 6 14 3083 FBgn0020510 1356.63 69.31 106.3 0.010319689 0.201991055 0.131702728 -5 -5 -5 0.1 dme-miR-1006-3p 6mer3-8 CGAATT 3R 14119621 14119626 - 3R_14119621_14119626_- 0.999997814 0.999989192 0.999993503 6.08E-06 Abi FBtr0112896|FBtr0337096|FBtr0082910|FBtr0337097|FBtr0307077|FBtr0307076 14119260|14119260|14119260|14119260|14119260|14119260 14120064|14120064|14120064|14120064|14120064|14120064 3R - 14119588 14119716 3'utr Abi FlyBase G50914.1 GTAGCCGAAAACGATGCAAGAAGGGGAAAGTGAAACCGGATACCCGTGAATAACTTATGCGATATTATAAAACTGTTCCACAACCGTAGACGAATTCTGTCCTGCTCCTGCCGCCAATCCAAATACTTT 28 14119622 0.97150218 12 26 154 0.965517241 1.447158031 0.413793103 0.035714286 0.068965517 28 1 0 28 3R:14119588-14119716 6 Abi FBtr0307077|FBtr0307076|FBtr0082910|FBtr0337097|FBtr0112896|FBtr0337096 14119260|14119260|14119260|14119260|14119260|14119260 14120064|14120064|14120064|14120064|14120064|14120064 CGAATT 6mer3-8 dme-miR-1006-3p 3R - 14119601 14119699 3'utr Abi FlyBase G38488.1 AAGAAGGGGAAAGTGAAACCGGATACCCGTGAATAACTTATGCGATATTATAAAACTGTTCCACAACCGTAGACGAATTCTGTCCTGCTCCTGCCGCCA 26 14119622 0.964732498 11 24 150 0.897435897 1.544068044 0.41025641 0.384615385 0.58974359 26 4 0 35 3R:14119601-14119699 6 9 3084 FBgn0020510 1356.63 69.31 106.3 0.006634086 0.129851392 0.08466604 -4 -4 -4 0.1 dme-miR-14-3p 7mer-A1 AGACTGA 3R 14119938 14119944 - 3R_14119938_14119944_- 0.823142153 0.823349415 0.823245784 0.000146513 Abi FBtr0112896|FBtr0337096|FBtr0082910|FBtr0337097|FBtr0307077|FBtr0307076 14119260|14119260|14119260|14119260|14119260|14119260 14120064|14120064|14120064|14120064|14120064|14120064 3R - 14119916 14119980 3'utr Abi FlyBase G50915.2 AGCTCCAAAAAATTTCAATTCAGTTATCGGAGAGTTAGACTGAGGACCGCAACAGACTCAGCTGA 39 14119946 0.814789467 5 37 169 0.958333333 1.662757832 0.125 0.230769231 0.375 39 2 0 46 3R:14119916-14119980 7 Abi FBtr0307077|FBtr0307076|FBtr0082910|FBtr0337097|FBtr0112896|FBtr0337096 14119260|14119260|14119260|14119260|14119260|14119260 14120064|14120064|14120064|14120064|14120064|14120064 AGACTGA 7mer-A1 dme-miR-14-3p 3R - 14119872 14119962 3'utr Abi FlyBase G38489.1 TTCAGTTATCGGAGAGTTAGACTGAGGACCGCAACAGACTCAGCTGACAATGACGATAAGATTTTGAGCATATTAATAAGGACAATTATAC 22 14119946 0.963587089 8 18 95 0.806451613 0.920818754 0.290322581 0.272727273 0.483870968 22 4 2 25 3R:14119872-14119962 7 27.5 3085 FBgn0020510 1356.63 69.31 106.3 0.020270818 0.396768143 0.258701787 2 2 2 0.1 dme-miR-2b-2-5p 7mer-m8 TTGAAGA 3R 14235033 14235039 - 3R_14235033_14235039_- 0.631503026 0.631517822 0.631510424 1.05E-05 CG43291 FBtr0347150 14234982 14236679 3R - 14234881 14235071 3'utr CG43291 FlyBase G50928.1 AGGGGAGCCATAGCTGAAGCTGCACCCAGACTTTGAAGATACACTTGTAGAACGAGTGGTTACACCACCAAGATGGAGTATTTAAGTTAAAAACTTTAAGGATGTCACAACATGTATAGATTTAAGTGTATGTTTGCAAGGAAAAATGCCATAATATGTAAGGGAAAAAGTTATAGTTCCTTTAAAATTCT 32 14235038 0.97276967 14 31 185 0.96969697 1.204119983 0.272727273 0.03125 0.060606061 32 0 1 32 3R:14234881-14235071 7 CG43291 FBtr0347150 14234982 14236679 TTGAAGA 7mer-m8 dme-miR-2b-2-5p 3R - 14234965 14235060 3'utr CG43291 FlyBase G38496.1 AGCTGAAGCTGCACCCAGACTTTGAAGATACACTTGTAGAACGAGTGGTTACACCACCAAGATGGAGTATTTAAGTTAAAAACTTTAAGGATGTCA 18 14235038 0.93381821 5 18 72 1 1.462397998 0.206896552 0.444444444 0.655172414 18 0 0 29 3R:14234965-14235060 7 15 3086 FBgn0262983 11.66666667 1.006666667 1.546666667 1.285714286 14.90066225 9.698275862 -1 -1 -1 0.1 dme-miR-11-3p 7mer-m1 TGTGATG 3R 14235886 14235892 - 3R_14235886_14235892_- 0.612064577 0.612065377 0.612064977 5.66E-07 CG43291 FBtr0347150 14234982 14236679 3R - 14235814 14235981 3'utr CG43291 FlyBase G50931.1 AGAAAGCACTCAAGGACCTGTGGGGCGGAATGAATGCAGCACTCAAAAGGAGGAGGACTCGGGTTACGTCGATTCAAGTAACCGAAGATTGTGATGGTGTCATGAATTTATGGTGCAGGGATATTAAAATGTCCCTCATCCTGAAAACTGGTTTACATTTGACCTATA 179 14235893 0.961521296 16 169 1039 0.948598131 1.353253528 0.186915888 0.173184358 0.308411215 179 3 8 203 3R:14235814-14235981 7 CG43291 FBtr0347150 14234982 14236679 TGTGATG 7mer-m1 dme-miR-11-3p 3R - 14235821 14236111 3'utr CG43291 FlyBase G38498.1 GAATCAACGATACTTGCAATTTCCGTGTCGAATCTTTATGCGAATGCATCTCGGAATGCTGGAGATGAATCTGGACCTGGTAACGGAGCCGAAGGAGGATGACAGCGACAGCGGATGCGGGAGCTTACCCAGAAAGCACTCAAGGACCTGTGGGGCGGAATGAATGCAGCACTCAAAAGGAGGAGGACTCGGGTTACGTCGATTCAAGTAACCGAAGATTGTGATGGTGTCATGAATTTATGGTGCAGGGATATTAAAATGTCCCTCATCCTGAAAACTGGTTTACATTTG 153 14235893 0.969897876 19 150 851 0.983122363 1.668385917 0.168776371 0.418300654 0.624472574 153 0 4 233 3R:14235821-14236111 7 141.5 3087 FBgn0262983 11.66666667 1.006666667 1.546666667 12.12857143 140.5629139 91.48706897 1 1 1 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 14256901 14256907 + 3R_14256901_14256907_+ 0.647013688 0.635642275 0.641327981 0.008040794 CG43179 FBtr0306052 14256732 14256930 3R + 14256885 14256942 3'utr CG43179 FlyBase G42746.1 ATTCAGGCGTTCTTATGGCAGCTTTAAAAAAGCCATAATGACGGTTAAGGTCTCTGCA 14 14256900 0.981767122 4 14 100 1 1.204119983 0 0.142857143 0.25 14 0 0 16 3R:14256885-14256942 7 CG43179 FBtr0306052 14256732 14256930 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 14256886 14256913 3'utr CG43179 FlyBase G32298.1 TTCAGGCGTTCTTATGGCAGCTTTAAAA 6 14256900 0.726681212 3 5 43 0.833333333 0.698970004 0 0 0 6 1 0 5 3R:14256886-14256913 7 9 3088 FBgn0262808 15 2.723333333 4.116666667 0.6 3.304773562 2.186234818 1 1 1 0.1 dme-miR-980-3p 6mer3-8 GGCAGC 3R 14263455 14263460 - 3R_14263455_14263460_- 0.999999676 0.999999967 0.999999822 2.12E-07 trx FBtr0082950|FBtr0082948|FBtr0082947|FBtr0082949 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 3R - 14263435 14263514 3'utr trx FlyBase G50948.2 TCCTATCGGGGCGATCGGTCAGACTTGTACAGGCAAAGTTCCATAGCATTTTTTGGCAGCCATTCAAGACGCGCGCACTT 62 14263461 0.781601175 9 51 404 0.826086957 1.278753601 0.086956522 0.096774194 0.188405797 62 10 2 57 3R:14263435-14263514 6 trx FBtr0082947|FBtr0082949|FBtr0082950|FBtr0082948 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 14263436 14263520 3'utr trx FlyBase G38508.1 GTATATTCCTATCGGGGCGATCGGTCAGACTTGTACAGGCAAAGTTCCATAGCATTTTTTGGCAGCCATTCAAGACGCGCGCACT 30 14263461 0.983629459 9 24 197 0.76744186 1.041392685 0.093023256 0.366666667 0.558139535 30 8 2 33 3R:14263436-14263520 6 36 3089 FBgn0003862 1984.743333 17.36 26.62333333 0.018138365 2.073732719 1.352197321 1 1 1 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 3R 14264069 14264074 - 3R_14264069_14264074_- 0.999999983 0.999999873 0.999999928 7.07E-08 trx FBtr0082950|FBtr0082948|FBtr0082947|FBtr0082949 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 3R - 14264058 14264091 3'utr trx FlyBase G50952.1 AATTACTTACAGGGGCTTGTGTTAGATTGTACAT 6 14264073 0.686116203 5 6 50 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 3R:14264058-14264091 6 trx FBtr0082947|FBtr0082949|FBtr0082950|FBtr0082948 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 14264053 14264089 3'utr trx FlyBase G38513.1 TTACTTACAGGGGCTTGTGTTAGATTGTACATATATT 11 14264073 0.687467593 4 9 97 0.894736842 0.929418926 0 0.363636364 0.631578947 11 1 1 17 3R:14264053-14264089 6 8.5 3090 FBgn0003862 1984.743333 17.36 26.62333333 0.00428267 0.489631336 0.319268812 -1 -1 -1 0.1 dme-miR-8-3p 7mer-m8 CAGTATT 3R 14264299 14264305 - 3R_14264299_14264305_- 0.661542519 0.661549179 0.661545849 4.74E-06 trx FBtr0082950|FBtr0082948|FBtr0082947|FBtr0082949 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 3R - 14264280 14264328 3'utr trx FlyBase G50955.1 AAAGAACAGAAACTCGATGACGTCAGTATTCAAGGGGAGATAATTAATA 164 14264306 0.845182834 6 156 814 0.95959596 1.977723605 0.580808081 0.164634146 0.308080808 164 7 1 190 3R:14264280-14264328 7 trx FBtr0082947|FBtr0082949|FBtr0082950|FBtr0082948 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 CAGTATT 7mer-m8 dme-miR-8-3p 3R - 14264283 14264348 3'utr trx FlyBase G38514.1 ATATCCGAGCGATCGGAGTGAAAGAACAGAAACTCGATGACGTCAGTATTCAAGGGGAGATAATTA 98 14264306 0.835554401 7 94 460 0.973856209 2.173186268 0.424836601 0.448979592 0.647058824 98 4 0 149 3R:14264283-14264348 7 129.5 3091 FBgn0003862 1984.743333 17.36 26.62333333 0.065247731 7.459677419 4.864154251 1 1 1 0.1 dme-miR-999-3p 7mer-m8 AGTTAAC 3R 14264501 14264507 - 3R_14264501_14264507_- 0.623843289 0.674512482 0.649177886 0.035828535 trx FBtr0082950|FBtr0082948|FBtr0082947|FBtr0082949 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 3R - 14264392 14264580 3'utr trx FlyBase G50956.1 CATTGCAAAAACTAATTGCTGCCCACAATGGGGGCAGAAAAAACTCACCTGGAATGAGAATTGAAACACTTGTAGTTAACGGTTATATCGATCTATGTTTGGTCAATCGTGATACTTTTCGTTTTACAACCCCCATACGTCTTAAGTAGTTGATATGTAAAAGTTAAACAGTTGATATTATTATATATC 36 14264478 0.988906463 22 32 294 0.888888889 1.602059991 0.2 0.25 0.4 36 5 0 40 3R:14264392-14264580 7 trx FBtr0082947|FBtr0082949|FBtr0082950|FBtr0082948 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 AGTTAAC 7mer-m8 dme-miR-999-3p 3R - 14264396 14264530 3'utr trx FlyBase G38515.1 GGAATGAGAATTGAAACACTTGTAGTTAACGGTTATATCGATCTATGTTTGGTCAATCGTGATACTTTTCGTTTTACAACCCCCATACGTCTTAAGTAGTTGATATGTAAAAGTTAAACAGTTGATATTATTATA 27 14264480 0.988483977 17 25 223 0.916666667 1.041392685 0.416666667 0.259259259 0.444444444 27 1 2 33 3R:14264396-14264530 7 7 3092 FBgn0003862 1984.743333 17.36 26.62333333 0.003526904 0.403225806 0.262927257 -29 -27 -28 0.1 dme-miR-184-5p 7mer-A1 GATAAGA 3R 14264905 14264911 - 3R_14264905_14264911_- 0.782859167 0.782729145 0.782794156 9.20E-05 trx FBtr0082950|FBtr0082948|FBtr0082947|FBtr0082949 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 3R - 14264881 14264968 stop_codon trx FlyBase G50957.1 GCGGTTCGAAAAGGTGTCGGAAGTACTTAAATTAATAAAAGGAAGATCAGTGTCAGAGATAAGAACTAAGTATGACGCTGGGCGTCGA 17 14264909 0.949387951 6 16 77 1 1.255272505 0.277777778 0.058823529 0.111111111 17 0 0 18 3R:14264881-14264968 7 trx FBtr0082947|FBtr0082949|FBtr0082950|FBtr0082948|FBtr0100277 14263356|14263356|14263356|14263356|14264656 14264933|14264933|14264933|14264933|14264933 GATAAGA 7mer-A1 dme-miR-184-5p 3R - 14264877 14264920 3'utr trx FlyBase G38516.1 AGTGTCAGAGATAAGAACTAAGTATGACGCTGGGCGTCGAAATT 7 14264909 0.957099222 3 6 28 1 1.113943352 0.076923077 0.285714286 0.615384615 7 0 0 13 3R:14264877-14264920 7 9 3093 FBgn0003862 1984.743333 17.36 26.62333333 0.004534591 0.51843318 0.33804933 -2 -2 -2 0.1 dme-miR-988-3p 6mer3-8 ACAAGG 3R 14301757 14301762 + 3R_14301757_14301762_+ 0.998801538 0.999999996 0.999400767 0.000847467 CG12207 FBtr0309999|FBtr0309998|FBtr0082922|FBtr0344157|FBtr0082923|FBtr0309997|FBtr0082921 14301482|14301482|14301482|14301482|14301482|14301482|14301482 14302276|14302276|14302276|14302276|14302276|14302276|14302276 3R + 14301541 14301977 3'utr CG12207 FlyBase G42756.1 GTTTTTAATTGCCGCGCATTGGGGAGATGACTTTGGTCAGCATGTTACATCACACGGAAATGCCGCACTCTAAATGTAATATAAATAATGATATCTATCGACAAATATGCGCGATACCTTACCTATACGATAAAACATTAATGTAACTGAGCTAAAACCTAAACTAAACTATATACCTAAACTAAGCGCTGCGCTATGTAAACCTGTAGTACGATGACAAGGCAGTTCTGTAAACCCATTTTGATCTTGTGTCAGCCCTGTATAATTGCCGCCAATTTGCTTGCAAGATCCGATCTGAACCGCATCGAACAGATACGGAAGCCTTCTGTCCTCCTGTCCGCCCTCCTGCCCCCCATTATGTTTACTTTTTGTATGACTCTAGCTTTAATCACACTGTGTATAATTTAGTTATGAGAATTATTAATGTTAATTGTATA 1203 14301739 0.903712093 88 1101 7837 0.921708185 1.936178509 0.161565836 0.147963425 0.270462633 1203 96 14 1295 3R:14301541-14301977 6 CG12207 FBtr0344157|FBtr0082922|FBtr0309998|FBtr0309999|FBtr0082921|FBtr0309997|FBtr0082923 14301482|14301482|14301482|14301482|14301482|14301482|14301482 14302276|14302276|14302276|14302276|14302276|14302276|14302276 ACAAGG 6mer3-8 dme-miR-988-3p 3R + 14301545 14302027 3'utr CG12207 FlyBase G32309.1 TTAATTGCCGCGCATTGGGGAGATGACTTTGGTCAGCATGTTACATCACACGGAAATGCCGCACTCTAAATGTAATATAAATAATGATATCTATCGACAAATATGCGCGATACCTTACCTATACGATAAAACATTAATGTAACTGAGCTAAAACCTAAACTAAACTATATACCTAAACTAAGCGCTGCGCTATGTAAACCTGTAGTACGATGACAAGGCAGTTCTGTAAACCCATTTTGATCTTGTGTCAGCCCTGTATAATTGCCGCCAATTTGCTTGCAAGATCCGATCTGAACCGCATCGAACAGATACGGAAGCCTTCTGTCCTCCTGTCCGCCCTCCTGCCCCCCATTATGTTTACTTTTTGTATGACTCTAGCTTTAATCACACTGTGTATAATTTAGTTATGAGAATTATTAATGTTAATTGTATATAGTCGCCAGAAAACACAACAATCCAACTGGACTGCTCTGACCGCTAAAA 864 14301738 0.898534561 83 773 5436 0.909836066 1.744292983 0.169150522 0.393518519 0.609538003 864 100 21 1221 3R:14301545-14302027 6 55 3094 FBgn0038220 244.6666667 14.73 22.60333333 0.22479564 3.733876443 2.433269429 18 19 18.5 0.1 dme-miR-932-5p 6mer2-7 GAATTG 3R 14302262 14302267 + 3R_14302262_14302267_+ 0.779705973 0.575318622 0.677512297 0.144523717 CG12207 FBtr0309999|FBtr0309998|FBtr0082922|FBtr0344157|FBtr0082923|FBtr0309997|FBtr0082921 14301482|14301482|14301482|14301482|14301482|14301482|14301482 14302276|14302276|14302276|14302276|14302276|14302276|14302276 3R + 14302196 14302277 3'utr CG12207 FlyBase G42758.1 TATCGAACTGCACTCATATCGAGCCAAGTCATGTTGTACGTGAGAATGTTTTTTAAAATAAAGTGAGAATTGTGTTGGAACA 17 14302266 0.980212426 11 15 107 0.88 1.342422681 0.32 0.294117647 0.52 17 3 0 22 3R:14302196-14302277 6 CG12207 FBtr0344157|FBtr0082922|FBtr0309998|FBtr0309999|FBtr0082921|FBtr0309997|FBtr0082923 14301482|14301482|14301482|14301482|14301482|14301482|14301482 14302276|14302276|14302276|14302276|14302276|14302276|14302276 GAATTG 6mer2-7 dme-miR-932-5p 3R + 14302225 14302278 3'utr CG12207 FlyBase G32312.1 CATGTTGTACGTGAGAATGTTTTTTAAAATAAAGTGAGAATTGTGTTGGAACAA 13 14302266 0.977309024 6 13 89 1 1.255272505 0 0.153846154 0.388888889 13 0 0 18 3R:14302225-14302278 6 9 3095 FBgn0038220 244.6666667 14.73 22.60333333 0.036784741 0.610997963 0.398171361 -4 -4 -4 0.1 dme-miR-283-5p 8mer-A1 TGATATTA 3R 14319424 14319431 + 3R_14319424_14319431_+ 0.579186976 0.592186242 0.585686609 0.009191822 pr-set7 FBtr0082930|FBtr0082929|FBtr0309996 14318757|14318757|14318757 14320494|14319692|14319692 3R + 14319379 14319436 3'utr pr-set7 FlyBase G42771.1 AAGAACAAATTTATCAAAAAGACCTAGACTATACAGATTGTAAATTGATATTAGACCC 10 14319410 0.984999538 4 9 71 1 1.041392685 0 0.1 0.181818182 10 0 0 11 3R:14319379-14319436 8 pr-set7 FBtr0309996|FBtr0082929|FBtr0082930 14318757|14318757|14318757 14319692|14319692|14320494 TGATATTA 8mer-A1 dme-miR-283-5p 3R + 14319389 14319435 3'utr pr-set7 FlyBase G32321.1 TTATCAAAAAGACCTAGACTATACAGATTGTAAATTGATATTAGACC 10 14319410 0.73356217 3 9 52 1 1.204119983 0.25 0.5 0.6875 10 0 0 16 3R:14319389-14319435 8 5 3096 FBgn0011474 544.8566667 15.96333333 24.49 0.009176725 0.313217791 0.204164965 14 14 14 0.1 dme-miR-34-5p 7mer-A1 ACTGCCA 3R 14319837 14319843 + 3R_14319837_14319843_+ 0.807515178 0.796470051 0.801992614 0.007810065 pr-set7 FBtr0082930 14318757 14320494 3R + 14319720 14319876 3'utr pr-set7 FlyBase G42774.1 AAGAGATGATGATGTTGATGAAGCCACGCATTCACATTGACAAGAATCGATTGTACACTATTTATATAGATATTTATATTAGATACATGTGTAATTTCTAACTATTACGTACTATTTACTGCCATAGAGCTATACACTCCCCCTCGCACCTGTCCCA 125 14319835 0.982639671 11 119 899 0.929032258 2.158362492 0.135483871 0.184 0.341935484 125 11 0 144 3R:14319720-14319876 7 pr-set7 FBtr0082930 14318757 14320494 ACTGCCA 7mer-A1 dme-miR-34-5p 3R + 14319806 14319864 3'utr pr-set7 FlyBase G32324.1 ATGTGTAATTTCTAACTATTACGTACTATTTACTGCCATAGAGCTATACACTCCCCCTC 56 14319835 0.983604819 7 50 391 0.94047619 1.420505837 0.202380952 0.375 0.583333333 56 3 2 79 3R:14319806-14319864 7 80.5 3097 FBgn0011474 544.8566667 15.96333333 24.49 0.147745279 5.042806431 3.287055941 2 2 2 0.1 dme-bantam-3p 7mer-m8 TGATCTC 3R 14320604 14320610 - 3R_14320604_14320610_- 0.434867434 0.411704232 0.423285833 0.016378856 Afti FBtr0310001 14320189 14321785 3R - 14320521 14320662 3'utr Afti FlyBase G51003.1 AGAAGAACTCCCATGCATTCCAAGTGTAAATGAGTGTGACTGGTTGCCATGATGATCTCCAGGTAATCGCTGGAAAACGAAACCCAATCCGCTCCAGTTCTTGATTATTGTTTTGTTCGTGTTAATGTGTTTTCATTTATTT 172 14320610 0.986334636 13 162 1176 0.947368421 1.77815125 0.336842105 0.093023256 0.178947368 172 8 2 180 3R:14320521-14320662 7 Afti FBtr0310001 14320189 14321785 TGATCTC 7mer-m8 dme-bantam-3p 3R - 14320525 14320635 3'utr Afti FlyBase G38537.1 AAATGAGTGTGACTGGTTGCCATGATGATCTCCAGGTAATCGCTGGAAAACGAAACCCAATCCGCTCCAGTTCTTGATTATTGTTTTGTTCGTGTTAATGTGTTTTCATTT 117 14320610 0.992688842 13 113 743 0.950819672 2.240549248 0.273224044 0.41025641 0.62295082 117 9 0 174 3R:14320525-14320635 7 108.5 3098 FBgn0038223 625.08 17.01666667 26.15666667 0.173577782 6.376101861 4.14808207 0 0 0 0.1 dme-miR-8-3p 8mer-A1 CAGTATTA 3R 14321636 14321643 - 3R_14321636_14321643_- 0.671664091 0.671557106 0.671610599 7.57E-05 Afti FBtr0310001|FBtr0310000|FBtr0273391 14320189|14321075|14321377 14321785|14321785|14321785 3R - 14321469 14321680 3'utr Afti FlyBase G51009.1 TAGGCGAAAGGATCGATCGCGCACCCGGGTAGCCAGTCAGTATTATGAATCCGTCTGATATTCACCATAATCCGAACCGTCACACATTGTAGTTTTGAGGCAAGCTGTGTTCCATGTTGTTGTCGTTGTTGTTAACCTTGTCGTTGGCATAATTGTTGTTGTTGTTGTGCATGCATGTTGTAGTCTTAGGCGTAAAAATCAGGATTTAGAAC 207 14321644 0.93296828 36 192 1460 0.923076923 1.755874856 0.295546559 0.169082126 0.303643725 207 16 3 228 3R:14321469-14321680 8 Afti FBtr0310001|FBtr0310000|FBtr0273391 14320189|14321075|14321377 14321785|14321785|14321785 CAGTATTA 8mer-A1 dme-miR-8-3p 3R - 14321483 14321678 3'utr Afti FlyBase G38542.1 GGCGAAAGGATCGATCGCGCACCCGGGTAGCCAGTCAGTATTATGAATCCGTCTGATATTCACCATAATCCGAACCGTCACACATTGTAGTTTTGAGGCAAGCTGTGTTCCATGTTGTTGTCGTTGTTGTTAACCTTGTCGTTGGCATAATTGTTGTTGTTGTTGTGCATGCATGTTGTAGTCTTAGGCGTAAAAA 124 14321644 0.981708501 25 108 858 0.882926829 2.257678575 0.27804878 0.411290323 0.643902439 124 24 0 181 3R:14321483-14321678 8 70 3099 FBgn0038223 625.08 17.01666667 26.15666667 0.111985666 4.113614104 2.67618198 1 1 1 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 14327697 14327702 + 3R_14327697_14327702_+ 0.999958879 0.999975585 0.999967232 1.18E-05 CG3321 FBtr0082931|FBtr0082932|FBtr0303795 14327535|14327535|14327535 14327735|14327735|14327735 3R + 14327671 14327724 3'utr CG3321 FlyBase G42778.1 CGTTTTTGTGTTTTCCTCTGATGCTTGTGCAAAAAACAGAATGTTCGAAATTAA 15 14327693 0.989141134 6 14 129 0.894736842 1.230448921 0.315789474 0.266666667 0.421052632 15 2 0 17 3R:14327671-14327724 6 CG3321 FBtr0303795|FBtr0082931|FBtr0082932 14327535|14327535|14327535 14327735|14327735|14327735 GTGCAA 6mer3-8 dme-miR-92b-3p 3R + 14327668 14327705 3'utr CG3321 FlyBase G32325.1 TATCGTTTTTGTGTTTTCCTCTGATGCTTGTGCAAAAA 5 14327692 0.984175576 4 5 41 1 0.903089987 0 0.6 0.75 5 0 0 8 3R:14327668-14327705 6 8 3100 FBgn0038224 1345.333333 334.8866667 513.9866667 0.005946482 0.023888679 0.015564606 4 5 4.5 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 3R 14329789 14329795 - 3R_14329789_14329795_- 0.782908699 0.782908584 0.782908642 7.07E-08 NK7.1 FBtr0306742 14329411 14330223 3R - 14329783 14329810 3'utr NK7.1 FlyBase G51024.1 ATTTATTGAGTGTTTGTACAAAAAAGGA 32 14329797 0.60890308 3 31 164 0.977272727 1.33243846 0.363636364 0.28125 0.477272727 32 0 1 43 3R:14329783-14329810 7 NK7.1 FBtr0306742 14329411 14330223 GTACAAA 7mer-A1 dme-miR-305-5p 3R - 14329782 14329810 3'utr NK7.1 FlyBase G38550.1 ATTTATTGAGTGTTTGTACAAAAAAGGAA 11 14329797 0.931052901 2 10 61 0.857142857 1.079181246 0.214285714 0.272727273 0.428571429 11 2 0 12 3R:14329782-14329810 7 21.5 3101 FBgn0024321 1080.813333 40.77666667 62.79666667 0.019892427 0.527262323 0.342374861 2 2 2 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 14329921 14329927 - 3R_14329921_14329927_- 0.753318162 0.753072416 0.753195289 0.000173807 NK7.1 FBtr0306742|FBtr0306742|FBtr0306742 14329411|14329411|14329411 14330223|14330223|14330223 3R - 14329816 14329964 3'utr NK7.1 FlyBase G51025.1 CTATGGCAAATTGTAATCTGAACTTTTGAGAATTTCATGTGATAATGTATACGAGGCGATTACAAAATTGATTTTACTACTTGAACTATGAACTATACTATGTATGTAGGCCTGTAAGCTCTGCTACCCTGTAAATTGCAATTGAATGA 50 14329931 0.985662963 17 44 364 0.911764706 1.491361694 0.588235294 0.22 0.426470588 50 5 1 62 3R:14329816-14329964 7 NK7.1 FBtr0306742|FBtr0306742|FBtr0306742 14329411|14329411|14329411 14330223|14330223|14330223 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 14329885 14329962 3'utr NK7.1 FlyBase G38552.1 ATGGCAAATTGTAATCTGAACTTTTGAGAATTTCATGTGATAATGTATACGAGGCGATTACAAAATTGATTTTACTAC 46 14329931 0.988247724 10 38 348 0.825396825 0.937852093 0.492063492 0.304347826 0.492063492 46 6 5 52 3R:14329885-14329962 7 36 3102 FBgn0024321 1080.813333 40.77666667 62.79666667 0.033308249 0.882857844 0.573278836 4 4 4 0.1 dme-miR-263a-5p 6mer3-8 GTGCCA 3R 14330190 14330195 - 3R_14330190_14330195_- 0.965126681 0.949705303 0.957415992 0.010904577 NK7.1 FBtr0306742|FBtr0082941|FBtr0082942|FBtr0347151 14329411|14330138|14330138|14330138 14330223|14330223|14330223|14330223 3R - 14330161 14330212 3'utr NK7.1 FlyBase G51028.1 CACAGTCAAATTAACTTGTGCCAAAAAGTCGAATATTGCTCATCCACAAAGA 12 14330194 0.964303215 3 12 62 1 1.230448921 0 0.333333333 0.529411765 12 0 0 17 3R:14330161-14330212 6 NK7.1 FBtr0347151|FBtr0082942|FBtr0082941|FBtr0306742 14330138|14330138|14330138|14329411 14330223|14330223|14330223|14330223 GTGCCA 6mer3-8 dme-miR-263a-5p 3R - 14330175 14330205 3'utr NK7.1 FlyBase G38554.1 AAATTAACTTGTGCCAAAAAGTCGAATATTG 7 14330195 0.757781504 3 6 33 0.888888889 0.903089987 0 0.142857143 0.333333333 7 1 0 8 3R:14330175-14330205 6 8.5 3103 FBgn0024321 1080.813333 40.77666667 62.79666667 0.007864448 0.208452546 0.135357503 -1 0 -0.5 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 3R 14358544 14358549 - 3R_14358544_14358549_- 0.999998016 0.999998646 0.999998331 4.24E-07 CG31320 FBtr0082943 14358354 14358599 3R - 14358537 14358570 5'utr CG31320 FlyBase G51039.1 ATTAGATTTATTTTACCAATTTGTGTTGCAAATT 12 14358550 0.783606642 3 11 143 0.923076923 1.079181246 0 0.083333333 0.153846154 12 1 0 12 3R:14358537-14358570 6 CG31320 FBtr0082943 14358354 14358599 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 14358532 14358566 5'utr CG31320 FlyBase G38560.1 GATTTATTTTACCAATTTGTGTTGCAAATTAAGCT 6 14358549 0.747476916 2 6 62 1 0.954242509 0.222222222 0.5 0.666666667 6 0 0 9 3R:14358532-14358566 6 9 3104 FBgn0051320 281 9.873333333 15.10666667 0.03202847 0.911546253 0.59576346 1 0 0.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 3R 14392067 14392073 - 3R_14392067_14392073_- 0.820551528 0.823308051 0.821929789 0.001949211 cv-c FBtr0112631|FBtr0112630|FBtr0112632 14391681|14391681|14391681 14392774|14392774|14392774 3R - 14392047 14392128 3'utr cv-c FlyBase G51047.2 TTGTCAGCAGATATTGATTGATTTGGCTTCAGATGTTGTTTGATTGACGCCGCATTACCTGAACATGTATCTGTTAATAAAC 132 14392074 0.958976686 14 118 691 0.909090909 1.124938737 0.289772727 0.234848485 0.426136364 132 5 11 160 3R:14392047-14392128 7 cv-c FBtr0112631|FBtr0112630|FBtr0112632 14391681|14391681|14391681 14392774|14392774|14392774 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R - 14392051 14392132 3'utr cv-c FlyBase G38564.2 AGTTTTGTCAGCAGATATTGATTGATTTGGCTTCAGATGTTGTTTGATTGACGCCGCATTACCTGAACATGTATCTGTTAAT 99 14392074 0.977428418 9 89 496 0.865384615 0.984205733 0.243589744 0.383838384 0.608974359 99 8 13 135 3R:14392051-14392132 7 105.5 3105 FBgn0086901 1575.736667 21.11333333 32.53666667 0.066952811 4.996842438 3.242495646 1 1 1 0.1 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3R 14619499 14619505 - 3R_14619499_14619505_- 0.620195209 0.620196783 0.620195996 1.13E-06 put FBtr0334030 14619028 14621033 3R - 14619482 14619523 3'utr put FlyBase G51116.1 AATTTGTATATTTTCCATTGGTGCTGAAACATCATTACGACG 36 14619506 0.779326452 2 35 298 0.976744186 1.62324929 0.023255814 0.166666667 0.302325581 36 1 0 42 3R:14619482-14619523 7 put FBtr0334030 14619028 14621033 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3R - 14619488 14619527 3'utr put FlyBase G38611.1 ATTTAATTTGTATATTTTCCATTGGTGCTGAAACATCATT 24 14619506 0.78849297 2 24 213 1 1.531478917 0.029411765 0.333333333 0.529411765 24 0 0 34 3R:14619488-14619527 7 30 3106 FBgn0003169 711.0033333 31.18333333 47.85 0.042193895 0.962052378 0.626959248 1 1 1 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 3R 14620629 14620634 - 3R_14620629_14620634_- 0.993438287 0.995007725 0.994223006 0.001109733 put FBtr0330227|FBtr0082977|FBtr0334030 14620328|14620328|14619028 14621021|14621033|14621033 3R - 14620602 14620700 3'utr put FlyBase G51120.1 AACTTTGAACAAAGAGCATTAGCTATGTCCAGAGACGTGGTAGTTGCTAATCCGACATTGACTTCATTGACTGATAACCATATATAGTTCTATATAAAT 669 14620634 0.717071033 20 623 5039 0.933174224 1.570987458 0.087112172 0.191330344 0.354415274 669 36 20 782 3R:14620602-14620700 6 put FBtr0334030|FBtr0330227|FBtr0082977 14619028|14620328|14620328 14621033|14621021|14621033 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 14620451 14620686 3'utr put FlyBase G38612.1 AGCATTAGCTATGTCCAGAGACGTGGTAGTTGCTAATCCGACATTGACTTCATTGACTGATAACCATATATAGTTCTATATAAATCATACATATAACGTACAATTTGTTTTGCCCTCTGGCAGTAGCCTGTGTGCATATGTAAACTGTTGAAAATTATCGTCAAGCCTTTTAAAGTATAATTTTATTTGTACGTTATCGAATGTCTTCATATAGTAGTAGTTTTATATTTAAAGTT 551 14620634 0.826500775 27 505 4201 0.921857305 1.419262711 0.07587769 0.406533575 0.629671574 551 39 30 814 3R:14620451-14620686 6 573 3107 FBgn0003169 711.0033333 31.18333333 47.85 0.805903395 18.37520043 11.97492163 0 0 0 0.1 dme-miR-980-3p 7mer-A1 GCAGCTA 3R 14620882 14620888 - 3R_14620882_14620888_- 0.823349562 0.823349562 0.823349562 0 put FBtr0330227|FBtr0082977|FBtr0334030 14620328|14620328|14619028 14621021|14621033|14621033 3R - 14620860 14621005 3'utr put FlyBase G51122.1 CGGATCTGTGGCTCTGCAAAAAAATCAGTTGAAGCTTTTTGCTTCGTAGTGGATAGTTGATCGTCGAGGTCGTAAGACGTTTCGTTTTTAGTTTAATAGTTTGTAGTACCATTATAAGCAGCTATAGAATGGGTTGATTTATACGA 84 14620881 0.972997113 21 71 721 0.862745098 1.467361417 0.176470588 0.178571429 0.323529412 84 12 2 88 3R:14620860-14621005 7 put FBtr0334030|FBtr0330227|FBtr0082977 14619028|14620328|14620328 14621033|14621021|14621033 GCAGCTA 7mer-A1 dme-miR-980-3p 3R - 14620862 14620916 3'utr put FlyBase G38614.1 AGTTTAATAGTTTGTAGTACCATTATAAGCAGCTATAGAATGGGTTGATTTATAC 38 14620892 0.794423129 12 30 352 0.777777778 1.322219295 0.018518519 0.342105263 0.537037037 38 11 1 42 3R:14620862-14620916 7 43.5 3108 FBgn0003169 711.0033333 31.18333333 47.85 0.061181148 1.394975949 0.909090909 -7 4 -1.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 14642862 14642867 - 3R_14642862_14642867_- 0.904918329 0.866647679 0.885783004 0.027061401 l(3)L1231 FBtr0344158|FBtr0344158|FBtr0344158 14642670|14642670|14642670 14644934|14644934|14644934 3R - 14642836 14642890 3'utr l(3)L1231 FlyBase G51131.1 ATTTTGTAATTTACGTGCATTTTTGTGATCTAATTTGTGTAACTATTATAAACGA 674 14642868 0.652736499 18 646 7278 0.958041958 1.914871818 0.350815851 0.221068249 0.388111888 674 27 9 822 3R:14642836-14642890 6 l(3)L1231 FBtr0344158|FBtr0344158|FBtr0344158 14642670|14642670|14642670 14644934|14644934|14644934 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 14642807 14643189 3'utr l(3)L1231 FlyBase G38623.1 TATGAATTCGTTCTTGAGTTAGTTGATTACCGATTACCGGGTTCACTTGATTACCGATTGAGTTGGCCCGCACTTTACTCTGATCTACTTCGCTGTGCAAGTGACGCGAACAAAATTAATGTCCTTTTTGTAGCGAAACTACAAAACCATGTATTTGATTATATGCTTTAAACCCTATTTTTATAACACTTTAATTTGTAAGAACTGTAGCGATGAACCTACAACCCCGCATCCCTCCAGTAGCCGCCTCTTTTTCACCATTTGAAGTTTTGTCTGTTTTCGGTATGAGGTACAATTTCATTTTGTAATTTACGTGCATTTTTGTGATCTAATTTGTGTAACTATTATAAACGAAAAAAAAAAGAAATACAAAATACTTTAAG 663 14642868 0.990762597 60 621 6423 0.947013487 1.816462259 0.265895954 0.404223228 0.619460501 663 41 14 983 3R:14642807-14643189 6 567 3109 FBgn0086686 1443.953333 29.16666667 44.69666667 0.39267197 19.44 12.68550973 1 1 1 0.1 dme-miR-283-5p 6mer3-8 TGATAT 3R 14643255 14643260 - 3R_14643255_14643260_- 0.988792056 0.99999643 0.994394243 0.007922637 l(3)L1231 FBtr0344158 14642670 14644934 3R - 14643208 14643383 3'utr l(3)L1231 FlyBase G51133.1 ACGTTAATGCACCACCCATGGCACACTCAAACACTTGCATCTTTCATAGGAACTTTCGTTTGGGCATAGCGAAACGATAGAGCAGAAGGAACTACTTTAAAGATAATGGAACTCTGTAAAATATGATATATAATAATTCCCCCACACTCTCACTCTCTATCTCTAAAACCCTATAT 28 14643269 0.943638896 17 27 173 0.96875 1.491361694 0.125 0.107142857 0.21875 28 1 0 31 3R:14643208-14643383 6 l(3)L1231 FBtr0344158 14642670 14644934 TGATAT 6mer3-8 dme-miR-283-5p 3R - 14643207 14643331 3'utr l(3)L1231 FlyBase G38624.1 CTTTCGTTTGGGCATAGCGAAACGATAGAGCAGAAGGAACTACTTTAAAGATAATGGAACTCTGTAAAATATGATATATAATAATTCCCCCACACTCTCACTCTCTATCTCTAAAACCCTATATA 25 14643287 0.802808474 14 24 161 0.942857143 1.51851394 0.085714286 0.36 0.542857143 25 2 0 33 3R:14643207-14643331 6 4 3110 FBgn0086686 1443.953333 29.16666667 44.69666667 0.002770173 0.137142857 0.089492132 9 27 18 0.1 dme-miR-965-3p 7mer-m8 TACGCTT 3R 14643610 14643616 - 3R_14643610_14643616_- 0.62020049 0.620202268 0.620201379 1.27E-06 l(3)L1231 FBtr0344158 14642670 14644934 3R - 14643557 14643656 3'utr l(3)L1231 FlyBase G51134.1 ATATTTATACAACAATACACAAAACAAGCAAGAAAACTGTTACGCTTTAAAATACGATATATACCGCTCACTGGAGACCGATCCCCAAATCACAGCCCTC 854 14643617 0.968733296 12 842 4678 0.986434109 2.229596528 0.076550388 0.162763466 0.307170543 854 9 5 1018 3R:14643557-14643656 7 l(3)L1231 FBtr0344158 14642670 14644934 TACGCTT 7mer-m8 dme-miR-965-3p 3R - 14643508 14643638 3'utr l(3)L1231 FlyBase G38625.1 ACAAAACAAGCAAGAAAACTGTTACGCTTTAAAATACGATATATACCGCTCACTGGAGACCGATCCCCAAATCACAGCCCTCAAGAAAACAAAACAAAAAAATTCACACCCAAACCATTCCATCTCCATCC 604 14643617 0.968729591 13 595 3317 0.982778416 2.330413773 0.09184845 0.324503311 0.531572905 604 12 3 856 3R:14643508-14643638 7 713 3111 FBgn0086686 1443.953333 29.16666667 44.69666667 0.493783271 24.44571429 15.95197256 1 1 1 0.1 dme-miR-988-3p 8mer-A1 ACAAGGGA 3R 14644095 14644102 - 3R_14644095_14644102_- 0.609253938 0.611779273 0.610516605 0.001785727 l(3)L1231 FBtr0344158 14642670 14644934 3R - 14644045 14644129 3'utr l(3)L1231 FlyBase G51138.1 AAACACCAACACACATACATACAACGTACAAGGGACTAGTTTGAAACCGCGAATCGTATTACTAAATATATATACAACTATATAT 330 14644103 0.925916552 13 301 1526 0.920716113 2.255272505 0.046035806 0.151515152 0.283887468 330 30 1 360 3R:14644045-14644129 8 l(3)L1231 FBtr0344158 14642670 14644934 ACAAGGGA 8mer-A1 dme-miR-988-3p 3R - 14644047 14644125 3'utr l(3)L1231 FlyBase G38630.1 ACCAACACACATACATACAACGTACAAGGGACTAGTTTGAAACCGCGAATCGTATTACTAAATATATATACAACTATAT 191 14644103 0.864646904 14 164 922 0.868327402 1.387389826 0.088967972 0.35078534 0.558718861 191 28 9 244 3R:14644047-14644125 8 225.5 3112 FBgn0086686 1443.953333 29.16666667 44.69666667 0.156168482 7.731428571 5.04511895 1 1 1 0.1 dme-miR-932-5p 6mer2-7 GAATTG 3R 14644229 14644234 - 3R_14644229_14644234_- 0.999999997 0.999996982 0.99999849 2.12E-06 l(3)L1231 FBtr0344158 14642670 14644934 3R - 14644204 14644294 3'utr l(3)L1231 FlyBase G51140.1 TGTTTAAAAATTTTGTGAACGCATTTACAACAACAACCACAACACCATACACTCAAATGAGAATTGCAAGAACTACGAAAACAAAACAGGT 42 14644230 0.957889115 8 40 193 0.962264151 1.707570176 0.150943396 0.214285714 0.377358491 42 2 0 51 3R:14644204-14644294 6 l(3)L1231 FBtr0344158 14642670 14644934 GAATTG 6mer2-7 dme-miR-932-5p 3R - 14644212 14644293 3'utr l(3)L1231 FlyBase G38631.1 GTTTAAAAATTTTGTGAACGCATTTACAACAACAACCACAACACCATACACTCAAATGAGAATTGCAAGAACTACGAAAACA 14 14644230 0.96623267 5 13 74 0.916666667 1.342422681 0.208333333 0.642857143 0.791666667 14 2 0 22 3R:14644212-14644293 6 16 3113 FBgn0086686 1443.953333 29.16666667 44.69666667 0.011080691 0.548571429 0.357968529 -4 -4 -4 0.1 dme-miR-79-3p 7mer-A1 AGCTTTA 3R 14644451 14644457 - 3R_14644451_14644457_- 0.82332864 0.823349309 0.823338974 1.46E-05 l(3)L1231 FBtr0344158 14642670 14644934 3R - 14644348 14644486 3'utr l(3)L1231 FlyBase G51141.1 AGTGAACCAACAAAAGGATTGTAGAGATCAGCTTTATTATACATATAAACGAGAAATTATAAAACAATACCAGAGCAAACAGATAAAATGAAACCGAAATTGTAGGAAATCTAGCAACAAATTTTGAATTCTGAATTAA 32 14644459 0.988820663 10 30 273 0.972222222 1.243038049 0.194444444 0.125 0.222222222 32 0 1 35 3R:14644348-14644486 7 l(3)L1231 FBtr0344158 14642670 14644934 AGCTTTA 7mer-A1 dme-miR-79-3p 3R - 14644437 14644476 3'utr l(3)L1231 FlyBase G38632.1 CAAAAGGATTGTAGAGATCAGCTTTATTATACATATAAAC 7 14644459 0.896624985 2 5 59 0.909090909 0.698970004 0 0.428571429 0.636363636 7 0 1 10 3R:14644437-14644476 7 14.5 3114 FBgn0086686 1443.953333 29.16666667 44.69666667 0.010041876 0.497142857 0.324408979 2 2 2 0.1 dme-miR-278-3p 6mer3-8 CCCACC 3R 14697842 14697847 - 3R_14697842_14697847_- 0.996277109 0.998041932 0.99715952 0.001247902 kibra FBtr0344383 14697687 14698883 3R - 14697713 14697881 3'utr kibra FlyBase G51202.1 TGTTTATGTTTTCACTAACCAGACCCAGCCTCTTCCCACCCCAAAATGTAGCAAGTAGTAGTATGAGTAGAATGAGAGTCGCCACACATATTTTTTCAATACCATAGTAATTTTAGTTGTAATAAATTATATGAAAGTGAACCTGTATATTGTAATTGTGCAATAAACA 30 14697849 0.975370804 14 27 167 0.951219512 1.591064607 0.073170732 0.2 0.414634146 30 2 0 39 3R:14697713-14697881 6 kibra FBtr0344383 14697687 14698883 CCCACC 6mer3-8 dme-miR-278-3p 3R - 14697816 14697868 3'utr kibra FlyBase G38686.1 ACTAACCAGACCCAGCCTCTTCCCACCCCAAAATGTAGCAAGTAGTAGTATGA 13 14697849 0.73934675 4 11 38 0.708333333 1.230448921 0 0.538461538 0.75 13 7 0 17 3R:14697816-14697868 6 11 3115 FBgn0262127 353.3166667 7.533333333 11.64333333 0.031133544 1.460176991 0.944746636 2 2 2 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 3R 14698004 14698009 - 3R_14698004_14698009_- 0.996079487 0.999996522 0.998038004 0.002769737 kibra FBtr0344383 14697687 14698883 3R - 14697978 14698076 3'utr kibra FlyBase G51204.1 CATAAAAGTGAGAGAAAATATAAAATTAAACCTTGTTATGCTTTCCCAAGCGGACCTGTTAAAACTGTTGACTTTGAAACTGTGCCGTGGTGCACTGAG 22 14698003 0.806828484 13 22 151 1 1.397940009 0.2 0.136363636 0.24 22 0 0 25 3R:14697978-14698076 6 kibra FBtr0344383 14697687 14698883 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 14697981 14698051 3'utr kibra FlyBase G38687.1 TTAAACCTTGTTATGCTTTCCCAAGCGGACCTGTTAAAACTGTTGACTTTGAAACTGTGCCGTGGTGCACT 16 14698009 0.983872482 8 15 117 0.961538462 1.397940009 0.153846154 0.375 0.615384615 16 1 0 25 3R:14697981-14698051 6 13.5 3116 FBgn0262127 353.3166667 7.533333333 11.64333333 0.038209349 1.792035398 1.159461781 -6 0 -3 0.1 dme-miR-980-3p 7mer-A1 GCAGCTA 3R 14698372 14698378 - 3R_14698372_14698378_- 0.823349561 0.823349559 0.82334956 0 kibra FBtr0344383 14697687 14698883 3R - 14698300 14698514 3'utr kibra FlyBase G51207.1 AAAAACCAAGAAACAAGGAATATCAACACAATAACGCGCACATTGTGCGTTCAATGCCTTCAAATTCATATTGAAACCAACTGTATTCTTAAGACTTGAGCAAAAATTATACGAATGTTTATGAATATTTTTATACGCAGCTAGTTAGGATAGTTAACCCAAGCCACATATACACAAAACGTGAGGAGAACGTAAAATATTTATTATACTGATGG 73 14698383 0.99947005 30 68 537 0.938271605 1.880813592 0.160493827 0.109589041 0.197530864 73 5 0 76 3R:14698300-14698514 7 kibra FBtr0344383 14697687 14698883 GCAGCTA 7mer-A1 dme-miR-980-3p 3R - 14698205 14698473 3'utr kibra FlyBase G38689.1 ATTGTGCGTTCAATGCCTTCAAATTCATATTGAAACCAACTGTATTCTTAAGACTTGAGCAAAAATTATACGAATGTTTATGAATATTTTTATACGCAGCTAGTTAGGATAGTTAACCCAAGCCACATATACACAAAACGTGAGGAGAACGTAAAATATTTATTATACTGATGGATCGATCGACGTCGCGCTCGAATCCAGTCGTTTAGGTTAGTTAGCTTGCGTTTTTGTTAAGCTTAAAACGAATTCTTATACTGTAATTTTTTTTA 41 14698383 0.986053456 23 37 338 0.929824561 1.72427587 0.175438596 0.341463415 0.526315789 41 4 0 53 3R:14698205-14698473 7 23 3117 FBgn0262127 353.3166667 7.533333333 11.64333333 0.06509741 3.053097345 1.97537933 5 5 5 0.1 dme-miR-1008-3p 7mer-m8 AGCTGTG 3R 14724824 14724830 - 3R_14724824_14724830_- 0.445059865 0.550425392 0.497742628 0.07450466 CG7530 FBtr0083021|FBtr0083020|FBtr0333277|FBtr0083019 14724758|14724758|14724758|14724758 14725158|14725158|14725158|14725158 3R - 14724808 14724870 3'utr CG7530 FlyBase G51232.1 ATTAAACAATGTCAATGAAATTGCATGTGTCTTGAGCTGAAGCTGTGTTAGTCTTGTTGACTC 30 14724818 0.785028927 12 24 272 0.794117647 1.431363764 0.323529412 0.133333333 0.235294118 30 7 0 27 3R:14724808-14724870 7 CG7530 FBtr0333277|FBtr0083019|FBtr0083021|FBtr0083020 14724758|14724758|14724758|14724758 14725158|14725158|14725158|14725158 AGCTGTG 7mer-m8 dme-miR-1008-3p 3R - 14724799 14724978 3'utr CG7530 FlyBase G38710.1 TTAGTTAGGGTTTCGTGTTAGACAATCCAGATCCAGATAGTTGGCATCGCATAAGCGGCAAAAAGGTTTCTCTCTTTATATCCTAATTGATTTCCTTTAATATATACAATTAAACAATGTCAATGAAATTGCATGTGTCTTGAGCTGAAGCTGTGTTAGTCTTGTTGACTCAATTTTTAC 46 14724818 0.989870308 23 42 420 0.924242424 1.484299839 0.227272727 0.347826087 0.545454545 46 4 1 61 3R:14724799-14724978 7 24.5 3118 FBgn0038256 709.2933333 50.04333333 76.62666667 0.034541422 0.489575701 0.319732034 -12 -12 -12 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 14725087 14725092 - 3R_14725087_14725092_- 0.999999916 0.999999338 0.999999627 4.24E-07 CG7530 FBtr0083021|FBtr0083020|FBtr0333277|FBtr0083019 14724758|14724758|14724758|14724758 14725158|14725158|14725158|14725158 3R - 14725030 14725160 stop_codon CG7530 FlyBase G51234.2 AGAACTTGAAGATCCGAACATCTGAGTTAAGATCCGAAGATCCGAGGAGCGGAGATGGAATCCGGGACTCTAGTAGACTAAAGCTTAGTGTAAATAGTTTATGGGGCGCTCTTTATCCGCTAATAACTAAT 72 14725089 0.853455756 12 68 342 0.962025316 1.880813592 0.455696203 0.097222222 0.17721519 72 3 0 76 3R:14725030-14725160 6 CG7530 FBtr0333277|FBtr0083019|FBtr0083021|FBtr0083020 14724758|14724758|14724758|14724758 14725158|14725158|14725158|14725158 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R - 14725000 14725125 3'utr CG7530 FlyBase G38711.1 GAAGATCCGAGGAGCGGAGATGGAATCCGGGACTCTAGTAGACTAAAGCTTAGTGTAAATAGTTTATGGGGCGCTCTTTATCCGCTAATAACTAATATTTAGTTGTAGTTGTTGACCGATATGATT 49 14725088 0.970372793 10 41 236 0.855072464 1.293730757 0.47826087 0.367346939 0.550724638 49 8 2 59 3R:14725000-14725125 6 43.5 3119 FBgn0038256 709.2933333 50.04333333 76.62666667 0.061328646 0.869246653 0.567687489 -3 -4 -3.5 0.1 dme-miR-980-5p 6mer3-8 GAAAAA 3R 14732766 14732771 - 3R_14732766_14732771_- 0.99990543 0.999991015 0.999948222 6.05E-05 eff FBtr0336876|FBtr0083018|FBtr0310554 14732412|14732703|14732703 14733494|14733494|14733494 3R - 14732738 14732795 3'utr eff FlyBase G51245.1 AAAACTACAAATAAAAATCAGCTGGAAAAATTATTATTATTATTATTATATTATATTT 16 14732778 0.963372229 4 14 102 0.894736842 1.230448921 0 0.1875 0.315789474 16 2 0 17 3R:14732738-14732795 6 eff FBtr0083018|FBtr0310554|FBtr0336876 14732703|14732703|14732412 14733494|14733494|14733494 GAAAAA 6mer3-8 dme-miR-980-5p 3R - 14732754 14732854 3'utr eff FlyBase G38719.1 AAAGCTAGACAGCTACCAACAACAGCATCAACATAATAAGTTTAAATACAAAGAAAAACAAAACTACAAATAAAAATCAGCTGGAAAAATTATTATTATTA 10 14732778 0.929790846 6 9 38 1 1.113943352 0 0.2 0.384615385 10 0 0 13 3R:14732754-14732854 6 10 3120 FBgn0011217 11311.32 849.8066667 1308.386667 0.00088407 0.011767382 0.007643001 7 7 7 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 3R 14791755 14791760 + 3R_14791755_14791760_+ 0.999999999 1 1 0 jvl FBtr0305694 14791293 14793735 3R + 14791741 14791773 3'utr jvl FlyBase G42822.1 AATTTAACAATGACTGTGTTGCCAATAGGAGTA 12 14791759 0.649346572 4 11 77 0.928571429 0.812913357 0.142857143 0.166666667 0.285714286 12 0 1 13 3R:14791741-14791773 6 jvl FBtr0305694 14791293 14793735 TGTGTT 6mer3-8 dme-miR-317-3p 3R + 14791741 14791772 3'utr jvl FlyBase G32355.1 AATTTAACAATGACTGTGTTGCCAATAGGAGT 12 14791758 0.667274197 5 11 74 0.941176471 1.204119983 0.176470588 0.25 0.470588235 12 1 0 16 3R:14791741-14791772 6 12 3121 FBgn0263929 908.0433333 17.64333333 26.93 0.013215228 0.680143586 0.445599703 -4 -3 -3.5 0.1 dme-miR-34-5p 7mer-m8 CACTGCC 3R 14792248 14792254 + 3R_14792248_14792254_+ 0.708945785 0.708953326 0.708949555 5.30E-06 jvl FBtr0305694 14791293 14793735 3R + 14792179 14792271 3'utr jvl FlyBase G42823.1 TGCTATTGCTTTGGGTTTGGGTCGTTGACTCAACACTTGGCTAGTGAAAGGTGCATCCTATCAAACTCTCACTGCCTATCGATGCCTTAGGTG 15 14792247 0.973657867 6 15 94 1 1.255272505 0.277777778 0.2 0.333333333 15 0 0 18 3R:14792179-14792271 7 jvl FBtr0305694 14791293 14793735 CACTGCC 7mer-m8 dme-miR-34-5p 3R + 14792233 14792258 3'utr jvl FlyBase G32356.1 ATCCTATCAAACTCTCACTGCCTATC 5 14792247 0.746062544 2 5 27 1 0.903089987 0 0.6 0.75 5 0 0 8 3R:14792233-14792258 7 6 3122 FBgn0263929 908.0433333 17.64333333 26.93 0.006607614 0.340071793 0.222799851 1 1 1 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 14792541 14792547 + 3R_14792541_14792547_+ 0.661600438 0.661599845 0.661600142 4.24E-07 jvl FBtr0305694 14791293 14793735 3R + 14792516 14792577 3'utr jvl FlyBase G42824.1 ATTGTTGGATCAGCCAGTTTCTCATTGTGTTCGAAAGTGAGTTTAAGCATAATTATTAGTTT 472 14792540 0.752758835 9 463 4416 0.980802792 2.272615061 0.422338569 0.167372881 0.314136126 472 9 2 562 3R:14792516-14792577 7 jvl FBtr0305694 14791293 14793735 TGTGTTC 7mer-m8 dme-miR-317-3p 3R + 14792515 14792563 3'utr jvl FlyBase G32357.1 CATTGTTGGATCAGCCAGTTTCTCATTGTGTTCGAAAGTGAGTTTAAGC 270 14792540 0.745441033 9 267 2446 0.990384615 2.31386722 0.408653846 0.374074074 0.59375 270 3 1 412 3R:14792515-14792563 7 367 3123 FBgn0263929 908.0433333 17.64333333 26.93 0.404165734 20.801058 13.62792425 1 1 1 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 3R 14793554 14793559 + 3R_14793554_14793559_+ 0.999241074 0.998942227 0.999091651 0.000211354 jvl FBtr0305690|FBtr0305694|FBtr0305693 14793489|14791293|14793489 14795868|14793735|14795868 3R + 14793523 14793613 3'utr jvl FlyBase G42826.1 CCATATTCGTGGACTAAAGGTGGTGTACTGATTGACTGATTGATTGACGTGTTGGTGGTGAATACATATATTTCGACTGCATGCCAAAAAT 22 14793554 0.985002362 8 22 178 1 1.414973348 0.538461538 0.181818182 0.307692308 22 0 0 26 3R:14793523-14793613 6 jvl FBtr0305691|FBtr0305689|FBtr0305694|FBtr0305690|FBtr0305693 14793489|14793489|14791293|14793489|14793489 14793607|14793607|14793735|14795868|14795868 TTGACT 6mer3-8 dme-miR-1012-3p 3R + 14793531 14793571 3'utr jvl FlyBase G32359.1 GTGGACTAAAGGTGGTGTACTGATTGACTGATTGATTGACG 12 14793554 0.953379137 4 12 99 1 1.255272505 0.5 0.416666667 0.611111111 12 0 0 18 3R:14793531-14793571 6 14 3124 FBgn0263929 908.0433333 17.64333333 26.93 0.015417766 0.79350085 0.51986632 0 0 0 0.1 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 14795186 14795191 + 3R_14795186_14795191_+ 0.999766068 0.995016291 0.997391179 0.003358616 jvl FBtr0305690|FBtr0305692|FBtr0305693|FBtr0305695 14793489|14795061|14793489|14795061 14795868|14795868|14795868|14795868 3R + 14795156 14795202 3'utr jvl FlyBase G42827.1 TCGAAAGAAAATGGATAAATATGTGTATGTAGCTGTAGTTTAGTGTT 5 14795185 0.992802336 3 5 44 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:14795156-14795202 6 jvl FBtr0305692|FBtr0305690|FBtr0305693|FBtr0305695 14795061|14793489|14793489|14795061 14795868|14795868|14795868|14795868 AGCTGT 6mer3-8 dme-miR-1008-3p 3R + 14795164 14795229 3'utr jvl FlyBase G32362.1 AAATGGATAAATATGTGTATGTAGCTGTAGTTTAGTGTTACGTGATGTGTATAATGTTGATTTAAA 8 14795183 0.980036023 4 7 81 0.9 0.954242509 0.3 0.25 0.4 8 1 0 9 3R:14795164-14795229 6 4.5 3125 FBgn0263929 908.0433333 17.64333333 26.93 0.004955711 0.255053845 0.167099889 1 3 2 0.1 dme-miR-932-5p 6mer2-7 GAATTG 3R 14795283 14795288 + 3R_14795283_14795288_+ 0.988400371 0.988434655 0.988417513 2.43E-05 jvl FBtr0305690|FBtr0305692|FBtr0305693|FBtr0305695 14793489|14795061|14793489|14795061 14795868|14795868|14795868|14795868 3R + 14795259 14795312 3'utr jvl FlyBase G42828.1 GAAATTATCGATTGTAACTGAAATGAATTGTGACTGAATTGTATTGAACGTAAT 105 14795287 0.753381814 8 101 787 0.939849624 1.619788758 0.436090226 0.219047619 0.383458647 105 6 2 125 3R:14795259-14795312 6 jvl FBtr0305692|FBtr0305690|FBtr0305693|FBtr0305695 14795061|14793489|14793489|14795061 14795868|14795868|14795868|14795868 GAATTG 6mer2-7 dme-miR-932-5p 3R + 14795267 14795311 3'utr jvl FlyBase G32363.1 CGATTGTAACTGAAATGAATTGTGACTGAATTGTATTGAACGTAA 50 14795287 0.743368617 7 50 356 1 1.986771734 0.515463918 0.64 0.81443299 50 0 0 97 3R:14795267-14795311 6 76.5 3126 FBgn0263929 908.0433333 17.64333333 26.93 0.084247081 4.33591536 2.840698106 -4 -4 -4 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 3R 14889144 14889149 - 3R_14889144_14889149_- 0.99999999 0.999999999 0.999999994 0 CycC FBtr0083010 14889002 14889193 3R - 14889100 14889182 3'utr CycC FlyBase G51267.1 AATCATTCATCATTAGCTGGTATTGCCCAATTGTGTGTTTGTACTCATATTACCAATGTATTTATGCCAATTAAACGAAAGTT 16 14889152 0.937424872 9 14 149 0.904761905 0.801632346 0.095238095 0.1875 0.380952381 16 0 2 19 3R:14889100-14889182 6 CycC FBtr0083010 14889002 14889193 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 14889096 14889170 3'utr CycC FlyBase G38736.1 TTAGCTGGTATTGCCCAATTGTGTGTTTGTACTCATATTACCAATGTATTTATGCCAATTAAACGAAAGTTTAAG 15 14889152 0.990981206 6 15 155 1 1.278753601 0.210526316 0.266666667 0.421052632 15 0 0 19 3R:14889096-14889170 6 10 3127 FBgn0004597 134.3233333 14.61666667 22.44333333 0.074447229 0.684150513 0.445566612 3 3 3 0.1 dme-miR-14-3p 7mer-A1 AGACTGA 3R 14896416 14896422 + 3R_14896416_14896422_+ 0.823349532 0.82334956 0.823349546 7.07E-08 CG14860 FBtr0289976 14895685 14896446 3R + 14896374 14896437 3'utr CG14860 FlyBase G42849.1 ACTGGCGGAAGAGTCCACTAAAAACACAAGAGACTAGACTTTAGACTGACTGAATAAATGTAAC 25 14896414 0.964034274 6 25 129 1 1.431363764 0.259259259 0.08 0.148148148 25 0 0 27 3R:14896374-14896437 7 CG14860 FBtr0289976 14895685 14896446 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 14896391 14896437 3'utr CG14860 FlyBase G32381.1 CTAAAAACACAAGAGACTAGACTTTAGACTGACTGAATAAATGTAAC 19 14896414 0.959361002 5 19 95 1 1.491361694 0.096774194 0.526315789 0.709677419 19 0 0 31 3R:14896391-14896437 7 21.5 3128 FBgn0038273 26.21 2.003333333 3.093333333 0.820297596 10.73211314 6.950431034 2 2 2 0.1 dme-miR-980-3p 6mer3-8 GGCAGC 3R 14902401 14902406 - 3R_14902401_14902406_- 0.999980509 0.999999863 0.999990186 1.37E-05 VhaPPA1-1 FBtr0083005|FBtr0308030 14902328|14902328 14903233|14903233 3R - 14902342 14902422 3'utr VhaPPA1-1 FlyBase G51287.1 TCAAGCTACTGTTTGAGGCAGCAGTTGTAGATGGTTGCACAGTCGCATTATTATTATTATAGAAAGTATTCCATATTAAAA 20 14902409 0.992721159 7 14 166 0.782608696 1.255272505 0.304347826 0.1 0.217391304 20 5 0 18 3R:14902342-14902422 6 VhaPPA1-1 FBtr0308030|FBtr0083005 14902328|14902328 14903233|14903233 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 14902318 14902455 3'utr VhaPPA1-1 FlyBase G38747.1 ATTTACTACCGCAAAACGATAAACTTGTATATTTCAAGCTACTGTTTGAGGCAGCAGTTGTAGATGGTTGCACAGTCGCATTATTATTATTATAGAAAGTATTCCATATTAAAACAAATAAAATATATACGTTTTGTT 25 14902410 0.986804833 14 24 203 0.96969697 1.505149978 0.212121212 0.28 0.454545455 25 1 0 32 3R:14902318-14902455 6 11.5 3129 FBgn0028662 780.9733333 70.53333333 107.34 0.014725215 0.163043478 0.107136203 3 4 3.5 0.1 dme-miR-965-3p 6mer3-8 TACGCT 3R 14902488 14902493 - 3R_14902488_14902493_- 0.915835421 1 0.957917711 0.059513359 VhaPPA1-1 FBtr0083005|FBtr0308030 14902328|14902328 14903233|14903233 3R - 14902444 14902495 3'utr VhaPPA1-1 FlyBase G51288.1 TCTACGCTGGCTCTTCAAAGGCTAATTTAAAATGTATTATATTTACTACCGC 8 14902482 0.984596027 4 7 55 0.833333333 1 0.5 0.5 0.666666667 8 2 0 10 3R:14902444-14902495 6 VhaPPA1-1 FBtr0308030|FBtr0083005 14902328|14902328 14903233|14903233 TACGCT 6mer3-8 dme-miR-965-3p 3R - 14902466 14902500 3'utr VhaPPA1-1 FlyBase G38748.1 TTGTTTCTACGCTGGCTCTTCAAAGGCTAATTTAA 7 14902483 0.640745523 6 7 52 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 3R:14902466-14902500 6 6.5 3130 FBgn0028662 780.9733333 70.53333333 107.34 0.008322947 0.092155009 0.060555245 -11 -10 -10.5 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 3R 14902524 14902529 - 3R_14902524_14902529_- 0.999999628 0.999999946 0.999999787 2.12E-07 VhaPPA1-1 FBtr0083005|FBtr0308030 14902328|14902328 14903233|14903233 3R - 14902508 14902626 3'utr VhaPPA1-1 FlyBase G51289.1 ATCACTCAATCGACTGTGGAGTGTGCACGGTGTGAAAACGACCGTGATTTGTTTATTTCATTTCTTTGCCAAACGAAAGACATCGTGTGTGTGTGTCTGTGTTTGATTTTAAGCAGTTT 34 14902533 0.949568744 16 32 274 0.947368421 1.556302501 0.184210526 0.117647059 0.210526316 34 2 0 36 3R:14902508-14902626 6 VhaPPA1-1 FBtr0308030|FBtr0083005 14902328|14902328 14903233|14903233 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 14902510 14902550 3'utr VhaPPA1-1 FlyBase G38749.1 AAGACATCGTGTGTGTGTGTCTGTGTTTGATTTTAAGCAGT 7 14902533 0.847637649 5 7 79 1 1.079181246 0 0.285714286 0.583333333 7 0 0 12 3R:14902510-14902550 6 9 3131 FBgn0028662 780.9733333 70.53333333 107.34 0.011524081 0.127599244 0.083845724 4 4 4 0.1 dme-miR-965-3p 6mer2-7 ACGCTT 3R 14902713 14902718 - 3R_14902713_14902718_- 1 1 1 0 VhaPPA1-1 FBtr0083005|FBtr0308030 14902328|14902328 14903233|14903233 3R - 14902631 14902791 3'utr VhaPPA1-1 FlyBase G51290.1 GGAAATTACGACTCGCTATACGCAGTTACTGCTTGCAGGAGACGCCCGACAAACCGAAATCCGATCAGCCGTAACGCTTTAAACTAGGACTTAGTTACTCATTAAGATGATAGTTGGTTAAGTTGGCAGTTGGTTTTCACGCCTCGCACGCTCGCAGTCAC 128 14902712 0.858986765 26 119 899 0.935064935 1.681241237 0.155844156 0.1640625 0.305194805 128 8 2 144 3R:14902631-14902791 6 VhaPPA1-1 FBtr0308030|FBtr0083005 14902328|14902328 14903233|14903233 ACGCTT 6mer2-7 dme-miR-965-3p 3R - 14902667 14902793 3'utr VhaPPA1-1 FlyBase G38752.1 TTGGAAATTACGACTCGCTATACGCAGTTACTGCTTGCAGGAGACGCCCGACAAACCGAAATCCGATCAGCCGTAACGCTTTAAACTAGGACTTAGTTACTCATTAAGATGATAGTTGGTTAAGTTG 65 14902720 0.931094502 21 61 433 0.913043478 1.62324929 0.195652174 0.323076923 0.52173913 65 7 1 84 3R:14902667-14902793 6 59 3132 FBgn0028662 780.9733333 70.53333333 107.34 0.075546754 0.836483932 0.549655301 -6 2 -2 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 15079704 15079710 - 3R_15079704_15079710_- 0.660575175 0.630364317 0.645469746 0.021362332 CG6966 FBtr0344380 15079318 15081197 3R - 15079689 15079732 3'utr CG6966 FlyBase G51299.1 TGTGCATGTGTCTAGCCACCAATGTGTTCTGAAATGCAATTCGA 87 15079710 0.808859472 10 58 715 0.684210526 1.034762106 0.336842105 0.08045977 0.157894737 87 25 5 65 3R:15079689-15079732 7 CG6966 FBtr0344380 15079318 15081197 TGTGTTC 7mer-m8 dme-miR-317-3p 3R - 15079682 15079733 3'utr CG6966 FlyBase G38756.1 ATGTGCATGTGTCTAGCCACCAATGTGTTCTGAAATGCAATTCGATGTGCAT 66 15079709 0.820935604 11 39 543 0.59223301 1.086359831 0.466019417 0.424242424 0.631067961 66 38 4 61 3R:15079682-15079733 7 75.5 3133 FBgn0038286 1338.856667 38.3 58.94666667 0.056391399 1.971279373 1.280818819 0 -1 -0.5 0.1 dme-miR-11-3p 7mer-m1 TGTGATG 3R 15080947 15080953 - 3R_15080947_15080953_- 0.612069328 0.612070279 0.612069804 7.07E-07 CG6966 FBtr0344380|FBtr0113236 15079318|15080451 15081197|15081197 3R - 15080893 15081078 3'utr CG6966 FlyBase G51303.1 TATCTAATACTACTATGACTACCGTCTATTTACTGTATAATTAGAGATGGAGAGAGAGTTCGAAACTATGCTGAATGATGAATGATGATATGGACGAGATCGTTACTAACGACTGGAAACTGATTTGTGATGTTAGCAAGCGAAGTGCCTGAATCGACGGATCAGGACGATAACTACTACAACTGA 783 15080955 0.979421794 36 718 4953 0.92513369 1.895623422 0.28342246 0.153256705 0.290909091 783 60 10 865 3R:15080893-15081078 7 CG6966 FBtr0344380|FBtr0113236 15079318|15080451 15081197|15081197 TGTGATG 7mer-m1 dme-miR-11-3p 3R - 15080891 15081048 3'utr CG6966 FlyBase G38760.1 TACTGTATAATTAGAGATGGAGAGAGAGTTCGAAACTATGCTGAATGATGAATGATGATATGGACGAGATCGTTACTAACGACTGGAAACTGATTTGTGATGTTAGCAAGCGAAGTGCCTGAATCGACGGATCAGGACGATAACTACTACAACTGACA 541 15080955 0.976444114 29 503 3251 0.931456548 2.103233406 0.298653611 0.390018484 0.596083231 541 51 5 761 3R:15080891-15081048 7 283.5 3134 FBgn0038286 1338.856667 38.3 58.94666667 0.211747835 7.402088773 4.809432255 2 2 2 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 15096529 15096535 - 3R_15096529_15096535_- 0.77759498 0.773192861 0.77539392 0.003112755 CG42788 FBtr0303485|FBtr0303485|FBtr0303485|FBtr0303486|FBtr0303486|FBtr0303486 15095955|15095955|15095955|15095955|15095955|15095955 15097627|15097627|15097627|15097627|15097627|15097627 3R - 15096512 15096551 3'utr CG42788 FlyBase G51320.1 AATCAAAATTTTAACTTGTGATATAAAAAAATGGAAAAAG 23 15096536 0.986396303 4 22 191 0.962962963 1.113943352 0 0.173913043 0.296296296 23 0 1 26 3R:15096512-15096551 7 CG42788 FBtr0303486|FBtr0303486|FBtr0303486|FBtr0303485|FBtr0303485|FBtr0303485 15095955|15095955|15095955|15095955|15095955|15095955 15097627|15097627|15097627|15097627|15097627|15097627 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 15096516 15096554 3'utr CG42788 FlyBase G38768.1 AATAATCAAAATTTTAACTTGTGATATAAAAAAATGGAA 21 15096537 0.664596539 6 20 179 0.96875 1.190331698 0 0.333333333 0.5625 21 0 1 31 3R:15096516-15096554 7 22 3135 FBgn0261859 601.7 10.87666667 16.7 0.036563071 2.022678517 1.317365269 1 2 1.5 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 3R 15097299 15097304 - 3R_15097299_15097304_- 0.999982083 0.999849305 0.999915694 9.39E-05 CG42788 FBtr0303485|FBtr0303486 15095955|15095955 15097627|15097627 3R - 15097278 15097318 3'utr CG42788 FlyBase G51322.1 ATATCGAAACTGGAATGTGACAGCTCATAGGAAGACATCTT 20 15097301 0.904477643 4 20 85 1 1.361727836 0.304347826 0.15 0.260869565 20 0 0 23 3R:15097278-15097318 6 CG42788 FBtr0303486|FBtr0303485 15095955|15095955 15097627|15097627 ATGTGA 6mer3-8 dme-miR-1003-3p 3R - 15097261 15097316 3'utr CG42788 FlyBase G38770.1 ATCGAAACTGGAATGTGACAGCTCATAGGAAGACATCTTAGTCGATGTGGTGGAGT 12 15097301 0.915770827 4 11 51 0.916666667 1.342422681 0.333333333 0.666666667 0.833333333 12 2 0 22 3R:15097261-15097316 6 15 3136 FBgn0261859 601.7 10.87666667 16.7 0.024929367 1.379098989 0.898203593 -3 -3 -3 0.1 dme-miR-283-5p 6mer3-8 TGATAT 3R 15191142 15191147 - 3R_15191142_15191147_- 0.482223997 0.95517274 0.718698368 0.334425233 CG6752 FBtr0306246|FBtr0083029 15191056|15191056 15191305|15191305 3R - 15191101 15191173 3'utr CG6752 FlyBase G51358.1 TATGCTTGCCATTATAAGTTCAGATGTGATATGCCGAAAGTGCAATGAAAAGAAGTTTAAATAATGAGCTATT 23 15191142 0.981720688 7 19 130 0.884615385 1.361727836 0.192307692 0.086956522 0.192307692 23 3 0 23 3R:15191101-15191173 6 CG6752 FBtr0306246|FBtr0083029 15191056|15191056 15191305|15191305 TGATAT 6mer3-8 dme-miR-283-5p 3R - 15191128 15191159 3'utr CG6752 FlyBase G38806.1 TAAGTTCAGATGTGATATGCCGAAAGTGCAAT 14 15191142 0.783931973 4 10 69 0.736842105 1.146128036 0.105263158 0.384615385 0.578947368 13 5 0 14 3R:15191128-15191159 6 16 3137 FBgn0038296 195.79 5.47 8.353333333 0.08172021 2.925045704 1.915403033 -5 -5 -5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 15191257 15191264 - 3R_15191257_15191264_- 0.631128072 0.631111873 0.631119973 1.15E-05 CG6752 FBtr0306246|FBtr0083029 15191056|15191056 15191305|15191305 3R - 15191236 15191306 stop_codon CG6752 FlyBase G51359.1 AGGAAAAACCCACCGATAGCAATCAAGGAAAGCCCAACCAAATCTAGTCAAACTCCTATGCTTTAAGTGTA 25 15191264 0.943774718 7 22 90 0.888888889 1.079181246 0.222222222 0.08 0.148148148 25 2 1 24 3R:15191236-15191306 8 CG6752 FBtr0306246|FBtr0083029 15191056|15191056 15191305|15191305 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R - 15191236 15191336 stop_codon CG6752 FlyBase G38807.1 AGTCCAGACGCCAATGATCGAGCGGGCCTAAGGAAAAACCCACCGATAGCAATCAAGGAAAGCCCAACCAAATCTAGTCAAACTCCTATGCTTTAAGTGTA 12 15191264 0.936155972 5 9 38 0.888888889 0.903089987 0.166666667 0.5 0.666666667 12 1 1 16 3R:15191236-15191336 8 12.5 3138 FBgn0038296 195.79 5.47 8.353333333 0.063843914 2.285191956 1.496408619 0 0 0 0.1 dme-miR-2b-2-5p 6mer2-7 TGAAGA 3R 15202499 15202504 + 3R_15202499_15202504_+ 0.604403457 0.999998861 0.802201159 0.27972819 CG42542 FBtr0301101|FBtr0301104|FBtr0301102|FBtr0302325|FBtr0301103|FBtr0302324 15202444|15202444|15202444|15202444|15202444|15202444 15202977|15202977|15202977|15202973|15202977|15203074 3R + 15202418 15202532 stop_codon CG42542 FlyBase G42871.2 TGTCGCCATACCTCCGGATGACATTTAGGCGAAGCCTTTATACTCCAATCGAGATTGCCCGCTGACGACCCCACAATATTATGAAGATTTAGTTTTAGTTACTACCTGATAAACC 44 15202494 0.973875865 12 37 191 0.945454545 1.716003344 0.036363636 0.159090909 0.327272727 44 3 0 52 3R:15202418-15202532 6 CG42542 FBtr0302325|FBtr0301102|FBtr0301104|FBtr0301101|FBtr0302324|FBtr0301103 15202444|15202444|15202444|15202444|15202444|15202444 15202973|15202977|15202977|15202977|15203074|15202977 TGAAGA 6mer2-7 dme-miR-2b-2-5p 3R + 15202457 15202525 3'utr CG42542 FlyBase G32396.1 ATACTCCAATCGAGATTGCCCGCTGACGACCCCACAATATTATGAAGATTTAGTTTTAGTTACTACCTG 28 15202473 0.751312822 8 25 118 0.930232558 1.301029996 0.046511628 0.321428571 0.558139535 28 2 1 40 3R:15202457-15202525 6 9.5 3139 FBgn0260659 161.8666667 9.733333333 14.87666667 0.05869028 0.976027397 0.638583912 5 26 15.5 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3R 15202886 15202892 + 3R_15202886_15202892_+ 0.80880954 0.808818836 0.808814188 6.58E-06 CG42542 FBtr0301101|FBtr0301101|FBtr0301104|FBtr0301104|FBtr0301102|FBtr0301102|FBtr0302325|FBtr0302325|FBtr0301103|FBtr0301103|FBtr0302324|FBtr0302324 15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444 15202977|15202977|15202977|15202977|15202977|15202977|15202973|15202973|15202977|15202977|15203074|15203074 3R + 15202823 15202897 3'utr CG42542 FlyBase G42873.1 GAGTTGTATCCTTTCCTTCATAACGCAGATCCTTATTCGCATATTTGTTTACGTAGCCGTGTTTACTTAATGGAA 7 15202884 0.915389841 6 6 68 0.857142857 0.77815125 0 0 0 7 1 0 6 3R:15202823-15202897 7 CG42542 FBtr0302325|FBtr0302325|FBtr0301102|FBtr0301102|FBtr0301104|FBtr0301104|FBtr0301101|FBtr0301101|FBtr0302324|FBtr0302324|FBtr0301103|FBtr0301103 15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444 15202973|15202973|15202977|15202977|15202977|15202977|15202977|15202977|15203074|15203074|15202977|15202977 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3R + 15202869 15202902 3'utr CG42542 FlyBase G32398.1 GTTTACGTAGCCGTGTTTACTTAATGGAAACAAC 8 15202883 0.81190218 4 7 54 1 1.204119983 0.125 0.625 0.8125 8 0 0 16 3R:15202869-15202902 7 5 3140 FBgn0260659 161.8666667 9.733333333 14.87666667 0.030889621 0.51369863 0.336096796 2 3 2.5 0.1 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 15222146 15222151 + 3R_15222146_15222151_+ 0.999998712 0.998318627 0.999158669 0.00118801 CG12241 FBtr0083051 15221954 15222371 3R + 15222121 15222226 3'utr CG12241 FlyBase G42898.1 TAAGTGCTTTACCATAACGATCTGTAGCTGTAACTATACCTTTAAAACGCCCTATGTATAGCTCGAGCCGTTTGTTTACTTAATGTCCATCCATTATTATAAATCC 31 15222144 0.791892975 16 28 255 0.885714286 1.491361694 0.085714286 0.129032258 0.228571429 31 4 0 31 3R:15222121-15222226 6 CG12241 FBtr0083051 15221954 15222371 AGCTGT 6mer3-8 dme-miR-1008-3p 3R + 15222104 15222217 3'utr CG12241 FlyBase G32411.1 TTGTCGTACACCTAACTTAAGTGCTTTACCATAACGATCTGTAGCTGTAACTATACCTTTAAAACGCCCTATGTATAGCTCGAGCCGTTTGTTTACTTAATGTCCATCCATTAT 24 15222146 0.98696807 14 21 188 0.857142857 1.477121255 0.114285714 0.291666667 0.514285714 24 5 0 30 3R:15222104-15222217 6 11.5 3141 FBgn0038304 479.84 19.50666667 29.96333333 0.023966322 0.589542037 0.383802425 2 0 1 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3R 15222197 15222203 + 3R_15222197_15222203_+ 0.808814917 0.808818836 0.808816877 2.76E-06 CG12241 FBtr0083051|FBtr0083051 15221954|15221954 15222371|15222371 3R + 15222121 15222226 3'utr CG12241 FlyBase G42898.1 TAAGTGCTTTACCATAACGATCTGTAGCTGTAACTATACCTTTAAAACGCCCTATGTATAGCTCGAGCCGTTTGTTTACTTAATGTCCATCCATTATTATAAATCC 31 15222214 0.791892975 16 28 255 0.885714286 1.491361694 0.085714286 0.129032258 0.228571429 31 4 0 31 3R:15222121-15222226 7 CG12241 FBtr0083051|FBtr0083051 15221954|15221954 15222371|15222371 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3R + 15222104 15222217 3'utr CG12241 FlyBase G32411.1 TTGTCGTACACCTAACTTAAGTGCTTTACCATAACGATCTGTAGCTGTAACTATACCTTTAAAACGCCCTATGTATAGCTCGAGCCGTTTGTTTACTTAATGTCCATCCATTAT 24 15222193 0.98696807 14 21 188 0.857142857 1.477121255 0.114285714 0.291666667 0.514285714 24 5 0 30 3R:15222104-15222217 7 9.5 3142 FBgn0038304 479.84 19.50666667 29.96333333 0.019798266 0.487012987 0.317054177 -17 4 -6.5 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 3R 15222341 15222347 + 3R_15222341_15222347_+ 0.481204396 0.587189993 0.534197194 0.074943136 CG12241 FBtr0083051 15221954 15222371 3R + 15222325 15222363 3'utr CG12241 FlyBase G42899.1 TGTTTAACTGTCTAAATGCATTTCATTAAAGTTTAATAT 6 15222341 0.827373312 2 6 62 1 0.77815125 0 0 0 6 0 0 6 3R:15222325-15222363 7 CG12241 FBtr0083051 15221954 15222371 TGCATTT 7mer-m8 dme-miR-277-3p 3R + 15222316 15222363 3'utr CG12241 FlyBase G32412.1 ACACATAGATGTTTAACTGTCTAAATGCATTTCATTAAAGTTTAATAT 5 15222341 0.988230361 2 5 50 1 1 0 0.6 0.8 5 0 0 10 3R:15222316-15222363 7 5.5 3143 FBgn0038304 479.84 19.50666667 29.96333333 0.011462154 0.281954887 0.183557682 0 0 0 0.1 dme-miR-317-3p 8mer-A1 TGTGTTCA 3R 15257050 15257057 + 3R_15257050_15257057_+ 0.63113329 0.631132342 0.631132816 7.07E-07 CG42404 FBtr0305614|FBtr0345173 15255666|15252205 15257765|15257765 3R + 15257013 15257074 3'utr CG42404 FlyBase G42920.1 TTTTGGTTGTAATAGATCTCTGACCTGAAAACTGTATTGTGTTCAACGGATGCTCAAAAAAA 30 15257049 0.709878547 4 30 231 1 1.568201724 0.297297297 0.2 0.351351351 30 0 0 37 3R:15257013-15257074 8 CG42404 FBtr0345173|FBtr0305614 15252205|15255666 15257765|15257765 TGTGTTCA 8mer-A1 dme-miR-317-3p 3R + 15256994 15257071 3'utr CG42404 FlyBase G32430.1 AAAACGGTTCCTGTTCCGCTTTTGGTTGTAATAGATCTCTGACCTGAAAACTGTATTGTGTTCAACGGATGCTCAAAA 28 15257049 0.982652144 5 28 218 1 1.612783857 0.219512195 0.392857143 0.585365854 28 0 0 41 3R:15256994-15257071 8 21.5 3144 FBgn0259823 5.333333333 0.116666667 0.176666667 4.03125 184.2857143 121.6981132 1 1 1 0.1 dme-miR-980-3p 6mer3-8 GGCAGC 3R 15258305 15258310 - 3R_15258305_15258310_- 0.999955399 0.999982266 0.999968832 1.90E-05 eIF-2gamma FBtr0337054|FBtr0310386|FBtr0310387 15257842|15257982|15257982 15258366|15258366|15258366 3R - 15258262 15258334 3'utr eIF-2gamma FlyBase G51437.2 AAGAACAACATCAGCGGCAAAAGTGGCAGCATCATCTTTATTAGGCCTCTTCACACTGCTCCTTCTTGTCCCA 37 15258311 0.960374812 11 36 146 1 1.602059991 0.125 0.054054054 0.125 37 0 0 40 3R:15258262-15258334 6 eIF-2gamma FBtr0310386|FBtr0337054|FBtr0310387 15257982|15257842|15257982 15258366|15258366|15258366 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 15258218 15258329 3'utr eIF-2gamma FlyBase G38860.1 CAACATCAGCGGCAAAAGTGGCAGCATCATCTTTATTAGGCCTCTTCACACTGCTCCTTCTTGTCCCACAGCTCCATTCTTCCCGTGTCCGTTGATCAAACCGAAACTAATT 28 15258311 0.966559253 12 27 143 0.973684211 1.267171728 0.078947368 0.321428571 0.5 28 0 1 37 3R:15258218-15258329 6 19.5 3145 FBgn0263740 1282.026667 78.22 119.4766667 0.015210292 0.249296855 0.163211785 1 1 1 0.1 dme-miR-92b-3p 7mer-m1 TGCAATT 3R 15265039 15265045 + 3R_15265039_15265045_+ 0.650213472 0.745960512 0.698086992 0.067703353 Set FBtr0083062 15265028 15265253 3R + 15265024 15265055 stop_codon Set FlyBase G42925.1 AAGTAAACTGATTAATGCAATTTCAAATCGCT 23 15265035 0.738934862 5 23 157 1 1.447158031 0.035714286 0.217391304 0.357142857 23 0 0 28 3R:15265024-15265055 7 Set FBtr0083062 15265028 15265253 TGCAATT 7mer-m1 dme-miR-92b-3p 3R + 15265024 15265051 stop_codon Set FlyBase G32436.1 AAGTAAACTGATTAATGCAATTTCAAAT 13 15265035 0.657963821 4 12 89 0.9375 1.176091259 0 0.153846154 0.3125 13 1 0 15 3R:15265024-15265051 7 18 3146 FBgn0014879 1526.92 162.5266667 250.57 0.011788437 0.110751056 0.071836213 4 4 4 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 15270283 15270289 + 3R_15270283_15270289_+ 0.658994189 0.658988904 0.658991546 3.75E-06 Zip88E FBtr0290018 15270194 15270532 3R + 15270189 15270310 stop_codon Zip88E FlyBase G42935.1 GGATTAGACATCTTTTCGTTGAGAAATCGTTTCAGCGCTGTGAGAAAATGTGCCGCTTTTTAAACTTAGAACACTTAGGATAATATTATGGATTGGCAGCTGTTAATCTCTTGTGTAAGACT 91 15270282 0.836167379 17 84 783 0.912621359 1.371067862 0.126213592 0.098901099 0.203883495 91 6 3 94 3R:15270189-15270310 7 Zip88E FBtr0290018 15270194 15270532 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 15270184 15270321 stop_codon Zip88E FlyBase G32446.1 GATGAGGATTAGACATCTTTTCGTTGAGAAATCGTTTCAGCGCTGTGAGAAAATGTGCCGCTTTTTAAACTTAGAACACTTAGGATAATATTATGGATTGGCAGCTGTTAATCTCTTGTGTAAGACTTGTTACTTGTG 75 15270281 0.836996111 22 73 663 0.971962617 2.017033339 0.121495327 0.346666667 0.542056075 75 3 0 104 3R:15270184-15270321 7 51.5 3147 FBgn0038312 158.6266667 12.80333333 19.79 0.324661679 4.022390003 2.602324406 1 2 1.5 0.1 dme-miR-184-5p 6mer2-7 GATAAG 3R 15270368 15270373 + 3R_15270368_15270373_+ 0.999983994 0.99999966 0.999991827 1.11E-05 Zip88E FBtr0290018 15270194 15270532 3R + 15270329 15270464 3'utr Zip88E FlyBase G42936.1 AACTAATCTTGTTTTAGGTACATTGTCGATCTGCCGTAGGATAAGTAAAAAGTTCAGTCTTCTCGTCTACATTTATATTTTCTCTTTCTCCAAAGTTTGTGTTATTTTTTATGCTTTTATTATATGTAATAAACCT 32 15270351 0.987003131 12 28 269 0.942857143 1.51851394 0.2 0.129032258 0.228571429 31 2 0 33 3R:15270329-15270464 6 Zip88E FBtr0290018 15270194 15270532 GATAAG 6mer2-7 dme-miR-184-5p 3R + 15270337 15270383 3'utr Zip88E FlyBase G32447.1 TTGTTTTAGGTACATTGTCGATCTGCCGTAGGATAAGTAAAAAGTTC 15 15270351 0.672447414 5 14 114 1 1.447158031 0.071428571 0.6 0.785714286 15 0 0 28 3R:15270337-15270383 6 14 3148 FBgn0038312 158.6266667 12.80333333 19.79 0.088257544 1.093465243 0.707427994 17 17 17 0.1 dme-miR-2b-2-5p 6mer2-7 TGAAGA 3R 15270928 15270933 - 3R_15270928_15270933_- 0.999999997 0.999999671 0.999999834 2.12E-07 Cp190 FBtr0083127|FBtr0083126 15270430|15270430 15271042|15271042 3R - 15270863 15271020 3'utr Cp190 FlyBase G51457.1 AAGTTTGGCGATTCAACGCAGGTCAGCAGATAAACGCACCTGAGCTCGGCGCGAATTTTCGGTTTCTATTGTAAATTAAATTGTTAATGAAGATCAAGGTGAATGATAAGATATGCATATGCACTGGTTTAAGTGTATAAGATCTAATCTACTCATCT 82 15270933 0.858714814 25 82 444 1 1.995635195 0.050505051 0.146341463 0.292929293 82 0 0 99 3R:15270863-15271020 6 Cp190 FBtr0083126|FBtr0083127 15270430|15270430 15271042|15271042 TGAAGA 6mer2-7 dme-miR-2b-2-5p 3R - 15270884 15271006 3'utr Cp190 FlyBase G38876.1 AACGCAGGTCAGCAGATAAACGCACCTGAGCTCGGCGCGAATTTTCGGTTTCTATTGTAAATTAAATTGTTAATGAAGATCAAGGTGAATGATAAGATATGCATATGCACTGGTTTAAGTGTA 37 15270933 0.974210245 8 35 190 1 1.748188027 0.053571429 0.378378378 0.589285714 37 0 0 56 3R:15270884-15271006 6 34.5 3149 FBgn0000283 4864.516667 141.61 217.1233333 0.007092174 0.243626863 0.158895866 0 0 0 0.1 dme-miR-14-3p 6mer2-7 AGACTG 3R 15278194 15278199 - 3R_15278194_15278199_- 0.863532385 0.915873727 0.889703056 0.037010888 l(3)neo43 FBtr0334696|FBtr0301089 15277979|15278146 15278242|15278242 3R - 15278174 15278216 3'utr l(3)neo43 FlyBase G51490.1 AAACAACCCATAAAAACAGACTGTTTGATGTACATAGTCATAA 50 15278193 0.628001242 5 48 245 0.969230769 1.498310554 0 0.26 0.430769231 50 1 1 63 3R:15278174-15278216 6 l(3)neo43 FBtr0301089|FBtr0334696 15278146|15277979 15278242|15278242 AGACTG 6mer2-7 dme-miR-14-3p 3R - 15278173 15278218 3'utr l(3)neo43 FlyBase G38901.1 GAAAACAACCCATAAAAACAGACTGTTTGATGTACATAGTCATAAA 39 15278193 0.919394309 4 39 174 1 1.792391689 0.032258065 0.435897436 0.64516129 39 0 0 62 3R:15278173-15278218 6 44.5 3150 FBgn0011476 117.71 35.50666667 54.64333333 0.378047744 1.253285768 0.814371988 -6 -6 -6 0.1 dme-miR-1007-3p 7mer-A1 GAGCTTA 3R 15297102 15297108 + 3R_15297102_15297108_+ 0.813848949 0.785020192 0.799434571 0.020384969 Tm1 FBtr0089963|FBtr0089961|FBtr0089962 15296938|15296938|15296938 15297679|15297679|15297679 3R + 15297052 15297102 3'utr Tm1 FlyBase G42954.1 CAAAACTTGTGCTTACCACGACGATTACGAATGATGCTTGAGGGCAGTTAG 27 15297089 0.946340943 6 27 131 1 1.568201724 0.540540541 0.259259259 0.459459459 27 0 0 37 3R:15297052-15297102 1 Tm1 FBtr0089961|FBtr0089962|FBtr0089963 15296938|15296938|15296938 15297679|15297679|15297679 GAGCTTA 7mer-A1 dme-miR-1007-3p 3R + 15297053 15297107 3'utr Tm1 FlyBase G32461.1 AAAACTTGTGCTTACCACGACGATTACGAATGATGCTTGAGGGCAGTTAGAGCTT 21 15297089 0.842854015 6 21 100 1 1.397940009 0.44 0.19047619 0.32 21 0 0 25 3R:15297053-15297107 6 2.5 3151 FBgn0003721 5849.68 316.09 484.7266667 0.000427374 0.00790914 0.005157546 13 13 13 0.1 dme-miR-980-3p 8mer-A1 GGCAGCTA 3R 15304166 15304173 + 3R_15304166_15304173_+ 0.668494408 0.668518269 0.668506338 1.69E-05 Tm1 FBtr0089968|FBtr0089960 15303722|15303722 15304972|15304529 3R + 15304115 15304199 5'utr Tm1 FlyBase G42962.1 CGATTACGTCGATATTTTCGATACCATTTCGCAAAATTCGAACGGTTGACTGGCAGCTAGCGCCATTTTACTATACTGTTGCAAT 881 15304165 0.945565852 9 863 3587 0.977055449 2.106360909 0.078393881 0.157775255 0.290630975 881 17 7 1022 3R:15304115-15304199 8 Tm1 FBtr0089960|FBtr0089968 15303722|15303722 15304529|15304972 GGCAGCTA 8mer-A1 dme-miR-980-3p 3R + 15304102 15304187 5'utr Tm1 FlyBase G32465.2 ATTTCGATATTTTCGATTACGTCGATATTTTCGATACCATTTCGCAAAATTCGAACGGTTGACTGGCAGCTAGCGCCATTTTACTA 536 15304165 0.864957285 10 527 2046 0.984486874 2.615423953 0.076372315 0.391791045 0.61097852 536 12 1 825 3R:15304102-15304187 8 704 3152 FBgn0003721 5849.68 316.09 484.7266667 0.120348464 2.227213768 1.452364907 1 1 1 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 15304848 15304853 + 3R_15304848_15304853_+ 0.999999994 1 0.999999997 0 Tm1 FBtr0089968 15303722 15304972 3R + 15304815 15304887 3'utr Tm1 FlyBase G42966.1 CTGCAACAAGAAATGGCATTAAAAATTCTAATTTGATCTATTTACGATTTACATAAATTAATTATTTATACTT 55 15304847 0.990927098 10 53 558 0.971014493 1.826074803 0.014492754 0.218181818 0.376811594 55 2 0 67 3R:15304815-15304887 6 Tm1 FBtr0089968 15303722 15304972 TGATCT 6mer3-8 dme-bantam-3p 3R + 15304772 15304888 3'utr Tm1 FlyBase G32470.1 TGATTCTGAATGCCGTGACACCCAAATGAAGATAAAACGAATGCTGCAACAAGAAATGGCATTAAAAATTCTAATTTGATCTATTTACGATTTACATAAATTAATTATTTATACTTT 44 15304847 0.988145618 12 41 379 0.953125 1.484299839 0.015625 0.363636364 0.5625 44 2 1 61 3R:15304772-15304888 6 41.5 3153 FBgn0003721 5849.68 316.09 484.7266667 0.007094405 0.131291721 0.085615261 1 1 1 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG 3R 15318315 15318320 - 3R_15318315_15318320_- 0.999994017 0.999991826 0.999992922 1.56E-06 CG6276 FBtr0083123 15318201 15318439 3R - 15318263 15318338 3'utr CG6276 FlyBase G51492.1 AAGAATCCTTTAAGCTTCGCTGTGCAAGAACAAAGTATCCTTAAAAACGTTTTGAAAACTATCCGGTATGTTTATT 10 15318323 0.976179382 5 9 60 0.9 0.653212514 0 0 0 10 0 1 9 3R:15318263-15318338 6 CG6276 FBtr0083123 15318201 15318439 GCTGTG 6mer2-7 dme-miR-1008-3p 3R - 15318303 15318338 3'utr CG6276 FlyBase G38902.1 AAGAATCCTTTAAGCTTCGCTGTGCAAGAACAAAGT 7 15318323 0.958332996 3 7 37 1 1 0 0.285714286 0.5 7 0 0 10 3R:15318303-15318338 6 7.5 3154 FBgn0038316 98.66666667 6.676666667 10.25333333 0.076013514 1.123315027 0.731469441 3 3 3 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 3R 15324537 15324542 + 3R_15324537_15324542_+ 0.999830843 0.999436681 0.999633762 0.000278671 ear FBtr0334695 15324283 15325279 3R + 15324504 15324562 3'utr ear FlyBase G42978.1 ATTGAAGTCGTCCTTTAGTTTTTGAGACTCATTTGTGTTAAGACTCGTTTCGTTTAAGA 203 15324526 0.738728478 16 197 2210 0.966527197 2.36361198 0.167364017 0.157635468 0.284518828 203 8 0 231 3R:15324504-15324562 6 ear FBtr0334695 15324283 15325279 TGTGTT 6mer3-8 dme-miR-317-3p 3R + 15324475 15324558 3'utr ear FlyBase G32479.1 AAGACCCAATCGATTTCGTTTTTCAAAATATTGAAGTCGTCCTTTAGTTTTTGAGACTCATTTGTGTTAAGACTCGTTTCGTTT 94 15324526 0.99162419 18 89 967 0.944444444 2.133538908 0.097222222 0.372340426 0.590277778 94 8 0 136 3R:15324475-15324558 6 137.5 3155 FBgn0026441 968.99 34.99666667 53.49 0.141900329 3.928945614 2.570573939 11 11 11 0.1 dme-miR-92b-3p 7mer-m1 TGCAATT 3R 15324580 15324586 + 3R_15324580_15324586_+ 0.765558751 0.761203834 0.763381292 0.00307945 ear FBtr0334695 15324283 15325279 3R + 15324580 15324616 3'utr ear FlyBase G42979.1 TGCAATTATACACTAACGCGACGATTTTAACGTTCTA 8 15324586 0.886065438 2 8 40 1 0.954242509 0.333333333 0.125 0.222222222 8 0 0 9 3R:15324580-15324616 6 ear FBtr0334695 15324283 15325279 TGCAATT 7mer-m1 dme-miR-92b-3p 3R + 15324583 15324627 3'utr ear FlyBase G32480.1 AATTATACACTAACGCGACGATTTTAACGTTCTACGCATTTGCTA 7 15324586 0.979053742 4 6 41 0.818181818 0.954242509 0 0.571428571 0.727272727 7 2 0 9 3R:15324583-15324627 3 7 3156 FBgn0026441 968.99 34.99666667 53.49 0.007224017 0.200019049 0.130865582 -6 -6 -6 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 15325437 15325443 - 3R_15325437_15325443_- 0.823347848 0.823347163 0.823347506 4.24E-07 CG6236 FBtr0083122|FBtr0083121 15325323|15325323 15325538|15325538 3R - 15325418 15325501 3'utr CG6236 FlyBase G51496.1 GCTAAGCAATCAACTGGAATAGATTTCTGCACTGATTGTAGATTTTAGATTACTCCTTCCAAAGAATATTGTCACTGGCTCCTT 95 15325445 0.7932172 18 90 749 0.964285714 1.73239376 0.241071429 0.159574468 0.294642857 94 3 1 108 3R:15325418-15325501 7 CG6236 FBtr0083122|FBtr0083121 15325323|15325323 15325538|15325538 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 15325411 15325534 3'utr CG6236 FlyBase G38907.1 TGCACAAAATGACAAGTCCAAAACATAGAAACTGCTAAGCAATCAACTGGAATAGATTTCTGCACTGATTGTAGATTTTAGATTACTCCTTCCAAAGAATATTGTCACTGGCTCCTTAAGTTAA 68 15325445 0.987197544 19 61 526 0.913043478 1.447158031 0.119565217 0.235294118 0.434782609 68 6 2 84 3R:15325411-15325534 7 62 3157 FBgn0038318 770.0133333 38.62666667 58.75333333 0.080518086 1.605108733 1.055259276 2 2 2 0.1 dme-miR-317-5p 7mer-A1 TATCCCA 3R 15338061 15338067 + 3R_15338061_15338067_+ 0.517089039 0.823338799 0.670213919 0.21655131 Sra-1 FBtr0083085 15337735 15338365 3R + 15337989 15338101 3'utr Sra-1 FlyBase G43012.1 AATTATATATATATACATGTAGATGTAATTTTGATTCACTTGCTACGGCATTCGATTCAGCTACTCGTACATTATCCCAAATACTCTATTCTAAGCTCCCTAAGATATTATGT 19 15338062 0.839015312 10 13 161 0.772727273 1.230448921 0.045454545 0.166666667 0.318181818 18 5 0 17 3R:15337989-15338101 7 Sra-1 FBtr0083085 15337735 15338365 TATCCCA 7mer-A1 dme-miR-317-5p 3R + 15338028 15338078 3'utr Sra-1 FlyBase G32503.1 TTGCTACGGCATTCGATTCAGCTACTCGTACATTATCCCAAATACTCTATT 5 15338061 0.977457292 3 4 32 1 0.77815125 0.5 0.2 0.333333333 5 0 0 6 3R:15338028-15338078 7 4.5 3158 FBgn0038320 2157.463333 56.28 86.24333333 0.002085783 0.079957356 0.052177946 -1 0 -0.5 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 3R 15344215 15344220 - 3R_15344215_15344220_- 0.736413187 0.768856801 0.752634994 0.02294109 Surf4 FBtr0083117 15343651 15344263 3R - 15344057 15344272 stop_codon Surf4 FlyBase G51515.1 AAGTGGTAGAGGCCAGGCAACGGTCGCTCCTTGAACGAAACACTTTCAACATTTGACTTTTACCGTGTTTTACTCCTTCTGAGAAATGTTAGTTAGGAATTACCATAAAATGGGACAACAACAGGAGCAGCATCAGCAGCACAACACCGGCACGTATAAGAACTTGACAATTTTCAATAAAGGGACTTCCGCAATACCCCTCTCCAATGGCTCACT 65 15344213 0.985419434 23 62 495 0.949367089 1.875061263 0.075949367 0.184615385 0.329113924 65 4 0 75 3R:15344057-15344272 6 Surf4 FBtr0083117 15343651 15344263 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 15344165 15344236 3'utr Surf4 FlyBase G38920.1 GAAACACTTTCAACATTTGACTTTTACCGTGTTTTACTCCTTCTGAGAAATGTTAGTTAGGAATTACCATAA 34 15344214 0.987185341 6 33 289 0.98 1.69019608 0.06 0.352941176 0.56 34 1 0 49 3R:15344165-15344236 6 35.5 3159 FBgn0019925 766.2766667 57.29666667 87.82333333 0.046327915 0.619582291 0.404220594 -7 -6 -6.5 0.1 dme-bantam-3p 7mer-m8 TGATCTC 3R 15349509 15349515 + 3R_15349509_15349515_+ 0.661615243 0.661615243 0.661615243 0 CG42726 FBtr0303074 15349502 15350391 3R + 15349468 15349553 stop_codon CG42726 FlyBase G43033.1 AAATATTGGTACCAAAAAGAAGAAAACACAAAGTGACGATATGATCTCTAATGAGTTGGCCCTTTTTCAAAGGGGTCCTCTAATTT 123 15349509 0.929379053 9 117 837 0.959459459 1.67516709 0.304054054 0.170731707 0.310810811 123 4 2 142 3R:15349468-15349553 7 CG42726 FBtr0303074 15349502 15350391 TGATCTC 7mer-m8 dme-bantam-3p 3R + 15349491 15349544 stop_codon CG42726 FlyBase G32519.2 AAACACAAAGTGACGATATGATCTCTAATGAGTTGGCCCTTTTTCAAAGGGGTC 79 15349509 0.629600397 6 74 529 0.93495935 2.06069784 0.422764228 0.405063291 0.617886179 79 8 0 115 3R:15349491-15349544 7 95.5 3160 FBgn0261679 36.5 1.936666667 2.98 2.616438356 49.31153184 32.04697987 0 0 0 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3R 15350339 15350345 + 3R_15350339_15350345_+ 0.544987704 0.627798891 0.586393298 0.058556361 CG42726 FBtr0303074 15349502 15350391 3R + 15350323 15350393 3'utr CG42726 FlyBase G43037.1 CGAAAAGATAGCCTAGTCTAGTCTGTAGTATCTCTATAATTGTAGTAATAAACCATTGCCTTACATCCTAA 16 15350346 0.806823183 4 16 124 1 1.255272505 0.222222222 0.125 0.222222222 16 0 0 18 3R:15350323-15350393 7 CG42726 FBtr0303074 15349502 15350391 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 15350322 15350391 3'utr CG42726 FlyBase G32521.1 ACGAAAAGATAGCCTAGTCTAGTCTGTAGTATCTCTATAATTGTAGTAATAAACCATTGCCTTACATCCT 10 15350348 0.855725241 8 10 82 1 1.146128036 0.142857143 0.4 0.571428571 10 0 0 14 3R:15350322-15350391 7 9 3161 FBgn0261679 36.5 1.936666667 2.98 0.246575342 4.647160069 3.020134228 -7 -9 -8 0.1 dme-miR-317-5p 7mer-A1 TATCCCA 3R 15353678 15353684 + 3R_15353678_15353684_+ 0.823231998 0.82326356 0.823247779 2.23E-05 CG5038 FBtr0083089 15353467 15353926 3R + 15353669 15353712 3'utr CG5038 FlyBase G43044.1 ATACATTCATATCCCATCAGCTAAAATCTCATGACACCCTAATT 38 15353690 0.791775568 6 35 232 0.926829268 1.579783597 0 0.078947368 0.146341463 38 3 0 38 3R:15353669-15353712 7 CG5038 FBtr0083089 15353467 15353926 TATCCCA 7mer-A1 dme-miR-317-5p 3R + 15353636 15353713 3'utr CG5038 FlyBase G32523.1 AATTTTAATTCCGTGCAATATTGTATCTATATCATACATTCATATCCCATCAGCTAAAATCTCATGACACCCTAATTG 30 15353690 0.771969573 8 30 195 1 1.643452676 0.022727273 0.4 0.590909091 30 0 0 44 3R:15353636-15353713 7 27.5 3162 FBgn0038324 139.0933333 6.273333333 9.646666667 0.197708972 4.383634431 2.850725639 -12 -12 -12 0.1 dme-miR-7-5p 7mer-m8 GTCTTCC 3R 15358864 15358870 + 3R_15358864_15358870_+ 0.704561408 0.690842804 0.697702106 0.009700515 CG5044 FBtr0083091|FBtr0083090 15358810|15358810 15359263|15359263 3R + 15358834 15358903 3'utr CG5044 FlyBase G43056.1 TTGTTTGAGCCTTGGCATCCAATCCTGTTTGTCTTCCGTTGAGCCGCTCATTCTTATATGCACACAACTT 33 15358872 0.988527127 8 32 296 0.941176471 1.028028724 0.029411765 0.03030303 0.058823529 33 0 2 32 3R:15358834-15358903 7 CG5044 FBtr0083091|FBtr0083090 15358810|15358810 15359263|15359263 GTCTTCC 7mer-m8 dme-miR-7-5p 3R + 15358839 15358916 3'utr CG5044 FlyBase G32535.1 TGAGCCTTGGCATCCAATCCTGTTTGTCTTCCGTTGAGCCGCTCATTCTTATATGCACACAACTTAATATCTTTGTAT 32 15358884 0.988470746 8 29 277 0.957446809 1.653212514 0.106382979 0.40625 0.595744681 32 2 0 45 3R:15358839-15358916 7 19 3163 FBgn0038326 271.75 19.3 29.30333333 0.069917203 0.984455959 0.648390399 -8 -20 -14 0.1 dme-miR-31a-5p 6mer2-7 CTTGCC 3R 15358954 15358959 + 3R_15358954_15358959_+ 0.591820884 0.984457819 0.788139351 0.277636215 CG5044 FBtr0083091|FBtr0083090 15358810|15358810 15359263|15359263 3R + 15358939 15358970 3'utr CG5044 FlyBase G43057.1 TGTTATGCATGGTTCCTTGCCTGCCGTTTTGC 13 15358956 0.688268888 4 12 111 0.875 1.146128036 0.3125 0.153846154 0.3125 13 2 0 14 3R:15358939-15358970 6 CG5044 FBtr0083091|FBtr0083090 15358810|15358810 15359263|15359263 CTTGCC 6mer2-7 dme-miR-31a-5p 3R + 15358938 15359048 3'utr CG5044 FlyBase G32536.1 ATGTTATGCATGGTTCCTTGCCTGCCGTTTTGCAATATTCTTTATATATCTTTAGCGTTCTGTGGCCACAGTTTGATGAGTTCTGTCGGCTAATTTTCCGCAATCTCTTCT 17 15358957 0.991016983 10 15 154 0.956521739 1.342422681 0.130434783 0.352941176 0.52173913 17 1 0 22 3R:15358938-15359048 6 10 3164 FBgn0038326 271.75 19.3 29.30333333 0.036798528 0.518134715 0.341258105 -2 -3 -2.5 0.1 dme-miR-33-5p 7mer-m8 CAATGCA 3R 15359125 15359131 + 3R_15359125_15359131_+ 0.672009968 0.671735921 0.671872945 0.000193818 CG5044 FBtr0083091|FBtr0083090 15358810|15358810 15359263|15359263 3R + 15359076 15359159 3'utr CG5044 FlyBase G43059.1 CGAGGAAGAATCCTATTCGCCGGTATTTACCAATAACGATTGTGAAATTCAATGCATTTAAATATATGATATACATATATGCCT 248 15359124 0.747358497 19 239 2059 0.963934426 1.866287339 0.055737705 0.185483871 0.337704918 248 8 3 294 3R:15359076-15359159 7 CG5044 FBtr0083091|FBtr0083090 15358810|15358810 15359263|15359263 CAATGCA 7mer-m8 dme-miR-33-5p 3R + 15359076 15359147 3'utr CG5044 FlyBase G32537.1 CGAGGAAGAATCCTATTCGCCGGTATTTACCAATAACGATTGTGAAATTCAATGCATTTAAATATATGATAT 138 15359123 0.734142341 17 132 1103 0.97029703 1.593286067 0.059405941 0.333333333 0.544554455 138 2 4 196 3R:15359076-15359147 7 163 3165 FBgn0038326 271.75 19.3 29.30333333 0.599816007 8.445595855 5.56250711 1 2 1.5 0.1 dme-miR-305-3p 6mer2-7 TGTGCC 3R 15359203 15359208 + 3R_15359203_15359208_+ 0.999997453 0.999957187 0.99997732 2.85E-05 CG5044 FBtr0083091|FBtr0083090 15358810|15358810 15359263|15359263 3R + 15359174 15359237 3'utr CG5044 FlyBase G43060.1 CAATTCGTAGTCCTAATACAATCAATAATTGTGCCTAAAGAATCGTTAGAATTCGTTTACCAAG 28 15359203 0.974200209 7 27 169 1 1.556302501 0.222222222 0.214285714 0.388888889 28 0 0 36 3R:15359174-15359237 6 CG5044 FBtr0083091|FBtr0083090 15358810|15358810 15359263|15359263 TGTGCC 6mer2-7 dme-miR-305-3p 3R + 15359182 15359230 3'utr CG5044 FlyBase G32538.1 AGTCCTAATACAATCAATAATTGTGCCTAAAGAATCGTTAGAATTCGTT 28 15359203 0.946681984 6 24 162 0.925 1.267171728 0.075 0.259259259 0.5 27 2 1 37 3R:15359182-15359230 6 23.5 3166 FBgn0038326 271.75 19.3 29.30333333 0.086476541 1.21761658 0.801956546 0 0 0 0.1 dme-miR-1012-3p 6mer2-7 TGACTA 3R 15362893 15362898 - 3R_15362893_15362898_- 0.998439888 0.903506082 0.950972985 0.067128334 CG6171 FBtr0083113 15362794 15363143 3R - 15362847 15362908 stop_codon CG6171 FlyBase G51545.1 TAAGTGGGGATGACTATGATTAGACTATAAATTCAAATTCGCTGTTAACTTAGATGATACGT 29 15362898 0.772267509 9 28 227 1 1.51851394 0.242424242 0.103448276 0.212121212 29 0 0 33 3R:15362847-15362908 6 CG6171 FBtr0083113 15362794 15363143 TGACTA 6mer2-7 dme-miR-1012-3p 3R - 15362833 15362919 stop_codon CG6171 FlyBase G38944.1 TAGCCAACCAATAAGTGGGGATGACTATGATTAGACTATAAATTCAAATTCGCTGTTAACTTAGATGATACGTTCCATTTGCCGAAT 24 15362891 0.984049465 10 23 181 0.95 1.579783597 0.2 0.5 0.7 24 2 0 38 3R:15362833-15362919 6 21 3167 FBgn0026737 228.3266667 29.69333333 45.44333333 0.091973488 0.707229457 0.462113988 0 -7 -3.5 0.1 dme-miR-184-3p 7mer-A1 CCGTCCA 3R 15362964 15362970 - 3R_15362964_15362970_- 0.823305801 0.823313778 0.823309789 5.66E-06 CG6171 FBtr0083113 15362794 15363143 3R - 15362940 15362989 3'utr CG6171 FlyBase G51546.1 ATGACAGGGATGCGGACTACCGTCCAGGCGCAGACATAAACGAAGATGAG 32 15362972 0.843204968 3 30 81 0.925 1.568201724 0.3 0.15625 0.325 32 3 0 37 3R:15362940-15362989 7 CG6171 FBtr0083113 15362794 15363143 CCGTCCA 7mer-A1 dme-miR-184-3p 3R - 15362933 15362987 3'utr CG6171 FlyBase G38945.1 GACAGGGATGCGGACTACCGTCCAGGCGCAGACATAAACGAAGATGAGGATGATG 19 15362972 0.852261304 4 19 45 1 1.447158031 0.357142857 0.368421053 0.571428571 19 0 0 28 3R:15362933-15362987 7 24.5 3168 FBgn0026737 228.3266667 29.69333333 45.44333333 0.107302403 0.825101033 0.539132986 2 2 2 0.1 dme-miR-276a-3p 6mer3-8 AGTTCC 3R 15415344 15415349 + 3R_15415344_15415349_+ 0.999875386 0.999991748 0.999933567 8.22E-05 Atx2 FBtr0083101 15415017 15416472 3R + 15415319 15415375 5'utr Atx2 FlyBase G43083.1 CCGTCGCCGGGCCAGCCGCACCAGCAGTTCCATCCGCCGCCACAGCCATCCCCCGCC 33 15415346 0.845266121 2 32 69 0.972222222 1.544068044 0.111111111 0.090909091 0.166666667 33 1 0 35 3R:15415319-15415375 6 Atx2 FBtr0083101 15415017 15416472 AGTTCC 6mer3-8 dme-miR-276a-3p 3R + 15415321 15415374 5'utr Atx2 FlyBase G32555.1 GTCGCCGGGCCAGCCGCACCAGCAGTTCCATCCGCCGCCACAGCCATCCCCCGC 13 15415346 0.836030545 2 11 27 0.789473684 1.176091259 0.263157895 0.384615385 0.578947368 13 4 0 15 3R:15415321-15415374 6 21.5 3169 FBgn0041188 1154.45 29.14333333 44.74333333 0.018623587 0.737733044 0.480518513 -2 -2 -2 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 15417160 15417165 + 3R_15417160_15417165_+ 0.999995094 0.999996178 0.999995636 7.78E-07 Atx2 FBtr0083100|FBtr0344377 15415551|15415551 15417277|15417277 3R + 15417099 15417188 3'utr Atx2 FlyBase G43090.1 TAACAAGAACAATCCGTATTACTTCTTTGCCCGTCATAAATCGGTTTGGTTATATTTCGTATGATCTAGAAGCATCTGTTGTGGTCTGTT 216 15417160 0.989513633 9 213 2063 0.987654321 2.380211242 0.432098765 0.111111111 0.209876543 216 3 0 240 3R:15417099-15417188 6 Atx2 FBtr0083100|FBtr0344377 15415551|15415551 15417277|15417277 TGATCT 6mer3-8 dme-bantam-3p 3R + 15417123 15417188 3'utr Atx2 FlyBase G32559.1 CTTTGCCCGTCATAAATCGGTTTGGTTATATTTCGTATGATCTAGAAGCATCTGTTGTGGTCTGTT 100 15417160 0.919584414 7 95 910 0.952662722 2.206825876 0.455621302 0.46 0.680473373 100 8 0 161 3R:15417123-15417188 6 154.5 3170 FBgn0041188 1154.45 29.14333333 44.74333333 0.133829962 5.301383964 3.453028384 0 0 0 0.1 dme-miR-34-5p 8mer-A1 CACTGCCA 3R 15442401 15442408 - 3R_15442401_15442408_- 0.67840794 0.678407847 0.678407894 7.07E-08 AdamTS-A FBtr0334629|FBtr0339398|FBtr0083160 15442244|15442244|15442244 15443238|15443238|15443238 3R - 15442350 15442423 3'utr AdamTS-A FlyBase G51563.1 TTGATTGATTGTTATCACTGCCAGATTTTCAACGTTCAATCGATTGTATCCCAAATCGCCTAAGTCCCGGTACC 62 15442410 0.748186109 15 55 491 0.884057971 1.183269844 0.536231884 0.112903226 0.202898551 62 5 3 61 3R:15442350-15442423 8 AdamTS-A FBtr0083160|FBtr0339398|FBtr0334629 15442244|15442244|15442244 15443238|15443238|15443238 CACTGCCA 8mer-A1 dme-miR-34-5p 3R - 15442277 15442427 3'utr AdamTS-A FlyBase G38954.1 ACTCTTGATTGATTGTTATCACTGCCAGATTTTCAACGTTCAATCGATTGTATCCCAAATCGCCTAAGTCCCGGTACCAAGTATCCTCGCTGTATTTTCATTTAACTAGCTAGGCTAATGCAAAACCAATGTTAACAATTAATTTAATGTC 64 15442409 0.985814981 23 59 493 0.94 1.672097858 0.43 0.34375 0.58 64 5 1 94 3R:15442277-15442427 8 45 3171 FBgn0038341 333.3333333 5.796666667 8.936666667 0.135 7.763082231 5.035434539 2 1 1.5 0.1 dme-miR-1003-3p 7mer-m8 ATGTGAG 3R 15442900 15442906 - 3R_15442900_15442906_- 0.671413929 0.671795169 0.671604549 0.00026962 AdamTS-A FBtr0334629|FBtr0339398|FBtr0083160 15442244|15442244|15442244 15443238|15443238|15443238 3R - 15442807 15442959 3'utr AdamTS-A FlyBase G51566.1 AGTAACTAGATATTATTGCCATGTAATGTATTAAGTATTGTAAATACTAGAGGATGTGAGCCTTTGAATTAGCAAATAGGGATTATCCATCATCATAGGTCGTCGCTCAGATAAGCCCGTATTTGTGCCAACTCCGGTATGCAGTGATGGAAG 31 15442903 0.97447262 19 31 225 1 1.544068044 0.142857143 0.096774194 0.2 31 0 0 35 3R:15442807-15442959 7 AdamTS-A FBtr0083160|FBtr0339398|FBtr0334629 15442244|15442244|15442244 15443238|15443238|15443238 ATGTGAG 7mer-m8 dme-miR-1003-3p 3R - 15442877 15442957 3'utr AdamTS-A FlyBase G38958.1 TAACTAGATATTATTGCCATGTAATGTATTAAGTATTGTAAATACTAGAGGATGTGAGCCTTTGAATTAGCAAATAGGGAT 19 15442903 0.962982093 8 17 136 0.904761905 0.977723605 0 0.105263158 0.19047619 19 1 1 19 3R:15442877-15442957 7 15 3172 FBgn0038341 333.3333333 5.796666667 8.936666667 0.045 2.587694077 1.67847818 -3 -3 -3 0.1 dme-miR-282-5p 6mer2-7 GAGGCT 3R 15493037 15493042 + 3R_15493037_15493042_+ 0.999897321 0.999996161 0.999946741 6.99E-05 CG5205 FBtr0083147 15492984 15493310 3R + 15493003 15493063 3'utr CG5205 FlyBase G43107.1 AAATCTAAAGTGTACCGTAGCATTCTGTAGAGTTGAGGCTTAACTTTTAGTTAATGGAGTT 15 15493036 0.968047578 8 15 112 1 1.255272505 0 0.2 0.333333333 15 0 0 18 3R:15493003-15493063 6 CG5205 FBtr0083147 15492984 15493310 GAGGCT 6mer2-7 dme-miR-282-5p 3R + 15493003 15493057 3'utr CG5205 FlyBase G32565.1 AAATCTAAAGTGTACCGTAGCATTCTGTAGAGTTGAGGCTTAACTTTTAGTTAAT 23 15493036 0.836384674 6 23 197 1 1.602059991 0 0.434782609 0.675 23 0 0 40 3R:15493003-15493057 6 16 3173 FBgn0038344 937.8966667 16.18666667 24.77666667 0.017059449 0.988467875 0.645768869 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 15493142 15493147 + 3R_15493142_15493147_+ 1 1 1 0 CG5205 FBtr0083147|FBtr0083147|FBtr0083147 15492984|15492984|15492984 15493310|15493310|15493310 3R + 15493130 15493161 3'utr CG5205 FlyBase G43108.1 GCGTATTTATTGTGTGATCCTCCAAGACATGT 11 15493141 0.915054294 4 9 103 0.857142857 0.602059991 0.142857143 0.181818182 0.357142857 11 0 2 12 3R:15493130-15493161 6 CG5205 FBtr0083147|FBtr0083147|FBtr0083147 15492984|15492984|15492984 15493310|15493310|15493310 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 15493121 15493159 3'utr CG5205 FlyBase G32566.1 ACTGAACTTGCGTATTTATTGTGTGATCCTCCAAGACAT 11 15493142 0.971903474 5 10 94 0.944444444 1.230448921 0.166666667 0.454545455 0.666666667 11 1 0 17 3R:15493121-15493159 6 10.5 3174 FBgn0038344 937.8966667 16.18666667 24.77666667 0.011195263 0.648682043 0.42378582 1 0 0.5 0.1 dme-miR-317-5p 7mer-m8 GTATCCC 3R 15532296 15532302 - 3R_15532296_15532302_- 0.414737475 0.497291865 0.45601467 0.058374776 AOX1 FBtr0083154 15532135 15532325 3R - 15532291 15532330 stop_codon AOX1 FlyBase G51575.1 ACTAGGTGGAGAAGAAGAATGTGGACTCGTATCCCTGACC 15 15532309 0.82990928 2 14 79 1 1.204119983 0.5 0.066666667 0.125 15 0 0 16 3R:15532291-15532330 7 AOX1 FBtr0083154 15532135 15532325 GTATCCC 7mer-m8 dme-miR-317-5p 3R - 15532286 15532329 stop_codon AOX1 FlyBase G38966.1 CTAGGTGGAGAAGAAGAATGTGGACTCGTATCCCTGACCGTGGG 5 15532309 0.927136264 2 5 22 1 0.903089987 0.125 0.6 0.75 5 0 0 8 3R:15532286-15532329 7 8.5 3175 FBgn0267408 1518.476667 44.04333333 68.01 0.005597715 0.192991751 0.12498162 7 7 7 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3R 15688239 15688245 + 3R_15688239_15688245_+ 0.442153815 0.442982232 0.442568024 0.000585767 pxb FBtr0334025|FBtr0083162 15687935|15687935 15690513|15688451 3R + 15688215 15688293 3'utr pxb FlyBase G43116.1 TATAGGTCTTAAGTGTTTTTCCAATGTGATTGCCAAATTCTACATTATAATACTAAACTTTATTGAAACCTGCAAAACT 28 15688245 0.958326109 6 28 235 1 1.591064607 0 0.321428571 0.512820513 28 0 0 39 3R:15688215-15688293 7 pxb FBtr0334025|FBtr0083162 15687935|15687935 15690513|15688451 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 15688209 15688293 3'utr pxb FlyBase G32574.1 AGAACTTATAGGTCTTAAGTGTTTTTCCAATGTGATTGCCAAATTCTACATTATAATACTAAACTTTATTGAAACCTGCAAAACT 28 15688245 0.855701666 6 27 250 0.951219512 1.113943352 0.024390244 0.321428571 0.536585366 28 0 2 39 3R:15688209-15688293 7 23.5 3176 FBgn0053207 527.4133333 20.74333333 31.55333333 0.044557084 1.132894103 0.744770759 -6 -6 -6 0.1 dme-bantam-3p 6mer2-7 GATCTC 3R 15798839 15798844 + 3R_15798839_15798844_+ 0.999922482 0.999987734 0.999955108 4.61E-05 nsl1 FBtr0301732 15798480 15801925 3R + 15798807 15798860 stop_codon nsl1 FlyBase G43141.1 CGACAACGCCACCACAGTCCCTCCTCAACCTCGATCTCGGCACTGAGCGGCGCT 15 15798837 0.982812053 2 10 77 0.611111111 1.041392685 0.222222222 0.133333333 0.277777778 15 7 0 11 3R:15798807-15798860 6 nsl1 FBtr0301732 15798480 15801925 GATCTC 6mer2-7 dme-bantam-3p 3R + 15798807 15798855 3'utr nsl1 FlyBase G32593.1 CGACAACGCCACCACAGTCCCTCCTCAACCTCGATCTCGGCACTGAGCG 11 15798837 0.96037655 3 10 49 0.944444444 1.230448921 0.444444444 0.454545455 0.666666667 11 1 0 17 3R:15798807-15798855 6 12 3177 FBgn0262527 2734.32 54.57333333 83.61333333 0.00438866 0.219887613 0.14351778 2 2 2 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG 3R 15799453 15799458 + 3R_15799453_15799458_+ 0.99987594 0.999985851 0.999930895 7.78E-05 nsl1 FBtr0309860|FBtr0301732|FBtr0309859 15798861|15798480|15798861 15801925|15801925|15801220 3R + 15799400 15799465 3'utr nsl1 FlyBase G43144.1 CGATAAGGGAAAACATTCGTCAGATGAGTCAATGGAGCGCAAACTGAGCAATGGCTGTGTCGCATC 23 15799451 0.958667252 3 22 105 0.96 1.380211242 0.24 0.043478261 0.12 23 1 0 24 3R:15799400-15799465 6 nsl1 FBtr0309859|FBtr0309860|FBtr0301732 15798861|15798861|15798480 15801220|15801925|15801925 GCTGTG 6mer2-7 dme-miR-1008-3p 3R + 15799417 15799464 3'utr nsl1 FlyBase G32595.1 CGTCAGATGAGTCAATGGAGCGCAAACTGAGCAATGGCTGTGTCGCAT 13 15799451 0.967094614 3 11 59 0.777777778 0.84509804 0.166666667 0.307692308 0.5 13 3 1 14 3R:15799417-15799464 6 16.5 3178 FBgn0262527 2734.32 54.57333333 83.61333333 0.006034407 0.302345468 0.197336948 2 2 2 0.1 dme-miR-79-3p 7mer-A1 AGCTTTA 3R 15800876 15800882 + 3R_15800876_15800882_+ 0.454577111 0.53961299 0.497095051 0.060129462 nsl1 FBtr0309860|FBtr0301732|FBtr0309859 15798861|15798480|15798861 15801925|15801925|15801220 3R + 15800849 15800899 3'utr nsl1 FlyBase G43149.1 AGCCGTCGACACCAGATGTCGAGCATGAGCTTTACGACTCGGCGATCGATG 10 15800874 0.954359407 5 10 47 1 1.079181246 0.333333333 0.2 0.333333333 10 0 0 12 3R:15800849-15800899 7 nsl1 FBtr0309859|FBtr0309860|FBtr0301732 15798861|15798861|15798480 15801220|15801925|15801925 AGCTTTA 7mer-A1 dme-miR-79-3p 3R + 15800851 15800893 3'utr nsl1 FlyBase G32598.1 CCGTCGACACCAGATGTCGAGCATGAGCTTTACGACTCGGCGA 8 15800879 0.741676947 3 8 32 1 1 0.4 0.25 0.4 8 0 0 10 3R:15800851-15800893 7 7.5 3179 FBgn0262527 2734.32 54.57333333 83.61333333 0.002742912 0.137429758 0.089698613 2 -3 -0.5 0.1 dme-miR-14-3p 6mer3-8 AAGACT 3R 15801049 15801054 + 3R_15801049_15801054_+ 0.999526124 0.997242833 0.998384479 0.001614537 nsl1 FBtr0309860|FBtr0301732|FBtr0301726|FBtr0334592|FBtr0309863|FBtr0309862|FBtr0301727|FBtr0309859|FBtr0309861|FBtr0301731|FBtr0301728|FBtr0301730 15798861|15798480|15801020|15801020|15801020|15801020|15801020|15798861|15801020|15801020|15801020|15801020 15801925|15801925|15801220|15802102|15801925|15801220|15801925|15801220|15801220|15801925|15801925|15801925 3R + 15801037 15801061 3'utr nsl1 FlyBase G43150.1 TTTTCGTTATTTAAGACTTTTAAAC 10 15801056 0.740047979 4 10 84 1 1.113943352 0 0.2 0.384615385 10 0 0 13 3R:15801037-15801061 6 nsl1 FBtr0301730|FBtr0309863|FBtr0309859|FBtr0309862|FBtr0309861|FBtr0301727|FBtr0301728|FBtr0301731|FBtr0309860|FBtr0301732|FBtr0301726|FBtr0334592 15801020|15801020|15798861|15801020|15801020|15801020|15801020|15801020|15798861|15798480|15801020|15801020 15801925|15801925|15801220|15801220|15801220|15801925|15801925|15801925|15801925|15801925|15801220|15802102 AAGACT 6mer3-8 dme-miR-14-3p 3R + 15801004 15801072 stop_codon nsl1 FlyBase G32599.1 CGCAGCAGACGCATCTAAGACCAAAATCCAAAGTTTTCGTTATTTAAGACTTTTAAACGATTTGTCAAT 14 15801056 0.984066557 4 14 110 1 1.342422681 0.181818182 0.357142857 0.590909091 14 0 0 22 3R:15801004-15801072 6 10.5 3180 FBgn0262527 2734.32 54.57333333 83.61333333 0.003840077 0.192401661 0.125578058 -7 -7 -7 0.1 dme-miR-14-3p 7mer-A1 AGACTGA 3R 15823606 15823612 + 3R_15823606_15823612_+ 0.823349472 0.82334955 0.823349511 0 alpha-Man-IIb FBtr0083179|FBtr0345238|FBtr0334593 15822936|15822936|15822936 15824118|15824118|15824118 3R + 15823585 15823628 3'utr alpha-Man-IIb FlyBase G43158.1 AGCGTTCGCATCGATTTGTTTAGACTGATTAGCCTAAAACGATT 68 15823604 0.730388281 8 68 633 1 1.86332286 0.150684932 0.073529412 0.136986301 68 0 0 73 3R:15823585-15823628 7 alpha-Man-IIb FBtr0334593|FBtr0345238|FBtr0083179 15822936|15822936|15822936 15824118|15824118|15824118 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 15823585 15823626 3'utr alpha-Man-IIb FlyBase G32605.1 AGCGTTCGCATCGATTTGTTTAGACTGATTAGCCTAAAACGA 43 15823604 0.707266663 6 42 397 0.986111111 1.851258349 0.236111111 0.372093023 0.625 43 1 0 71 3R:15823585-15823626 7 55.5 3181 FBgn0026616 98.7 2.216666667 3.413333333 0.56231003 25.03759398 16.25976563 2 2 2 0.1 dme-bantam-3p 7mer-m8 TGATCTC 3R 15844299 15844305 + 3R_15844299_15844305_+ 0.66161506 0.661615243 0.661615151 7.07E-08 spn-E FBtr0083183 15844105 15844415 3R + 15844281 15844330 3'utr spn-E FlyBase G43165.1 TTTCTATGTTATGTTGAATGATCTCTCTTCGTTCAATTACGAAGTGTAAA 23 15844299 0.823496831 4 22 270 0.961538462 1.397940009 0.153846154 0.130434783 0.230769231 23 1 0 25 3R:15844281-15844330 7 spn-E FBtr0083183 15844105 15844415 TGATCTC 7mer-m8 dme-bantam-3p 3R + 15844286 15844332 3'utr spn-E FlyBase G32609.1 ATGTTATGTTGAATGATCTCTCTTCGTTCAATTACGAAGTGTAAAAT 21 15844298 0.747508333 6 19 227 0.964285714 1.130333768 0.178571429 0.333333333 0.5 21 0 1 27 3R:15844286-15844332 7 21.5 3182 FBgn0003483 512.23 13.13666667 20.07333333 0.041973332 1.636640447 1.071072733 0 1 0.5 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3R 15854046 15854052 - 3R_15854046_15854052_- 0.443129538 0.443130094 0.443129816 4.24E-07 Hmt-1 FBtr0083188 15853866 15854095 3R - 15853964 15854083 3'utr Hmt-1 FlyBase G51626.1 TACAGAGTAGTTTCTGATATTCCTGATTCCATGTGATTTGTGGTGTATTGTTATACGTATGAGAGCAGCTCGTCAAAGTCTTAGTTCGTCTATAAGTAACCTTATATGCTACTCTTATAC 111 15854046 0.990448997 15 109 1111 0.986013986 1.672097858 0.111888112 0.207207207 0.384615385 111 0 2 141 3R:15853964-15854083 7 Hmt-1 FBtr0083188 15853866 15854095 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 15853988 15854085 3'utr Hmt-1 FlyBase G39001.1 CATACAGAGTAGTTTCTGATATTCCTGATTCCATGTGATTTGTGGTGTATTGTTATACGTATGAGAGCAGCTCGTCAAAGTCTTAGTTCGTCTATAAG 82 15854046 0.989547903 14 81 786 0.992307692 2.11058971 0.161538462 0.402439024 0.623076923 82 1 0 129 3R:15853988-15854085 7 85.5 3183 FBgn0038376 648.03 26.12666667 39.84666667 0.131938336 3.2725185 2.14572528 -6 -6 -6 0.1 dme-miR-305-5p 8mer-A1 AGTACAAA 3R 15934698 15934705 + 3R_15934698_15934705_+ 0.605653875 0.60432904 0.604991458 0.000936846 blp FBtr0345214|FBtr0083203 15934636|15934636 15934940|15934940 3R + 15934644 15934741 3'utr blp FlyBase G43172.1 TTGTTGTCCCAATCGAACTAATTAGCTGATAATTGATTTAAAAACTACGTGTTAAGTACAAAAAATGAAAGTCTGTTGCTGTAAATAGAGATTTACGA 33 15934720 0.724706292 9 31 204 0.948717949 1.568201724 0.384615385 0.121212121 0.256410256 33 2 0 37 3R:15934644-15934741 8 blp FBtr0345214|FBtr0083203 15934636|15934636 15934940|15934940 AGTACAAA 8mer-A1 dme-miR-305-5p 3R + 15934645 15934734 3'utr blp FlyBase G32614.1 TGTTGTCCCAATCGAACTAATTAGCTGATAATTGATTTAAAAACTACGTGTTAAGTACAAAAAATGAAAGTCTGTTGCTGTAAATAGAGA 34 15934719 0.736941988 9 33 206 0.946428571 1.72427587 0.321428571 0.470588235 0.678571429 34 3 0 53 3R:15934645-15934734 8 22.5 3184 FBgn0038387 172.3333333 22.73666667 34.87666667 0.130560928 0.989590969 0.64513046 -22 -21 -21.5 0.1 dme-miR-304-5p 7mer-m8 TGAGATT 3R 15962371 15962377 - 3R_15962371_15962377_- 0.620203442 0.620203412 0.620203427 0 CG4287 FBtr0083240|FBtr0301716 15962165|15962165 15962537|15962537 3R - 15962350 15962394 3'utr CG4287 FlyBase G51636.1 AAATATGGGGACACCTATGAGATTTACAGATTTTAGTCAATTGCA 22 15962377 0.747213711 4 21 147 0.964285714 1.431363764 0.25 0.227272727 0.392857143 22 1 0 27 3R:15962350-15962394 7 CG4287 FBtr0083240|FBtr0301716 15962165|15962165 15962537|15962537 TGAGATT 7mer-m8 dme-miR-304-5p 3R - 15962349 15962390 3'utr CG4287 FlyBase G39008.1 ATGGGGACACCTATGAGATTTACAGATTTTAGTCAATTGCAA 9 15962377 0.812112578 4 9 59 1 1.176091259 0.4 0.333333333 0.6 9 0 0 15 3R:15962349-15962390 7 15.5 3185 FBgn0038388 224 16.66 25.57666667 0.069196429 0.930372149 0.606021113 0 0 0 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 3R 15962460 15962465 - 3R_15962460_15962465_- 0.999948707 0.999968802 0.999958754 1.42E-05 CG4287 FBtr0083240|FBtr0301716 15962165|15962165 15962537|15962537 3R - 15962442 15962481 3'utr CG4287 FlyBase G51637.1 GAAAAATCATTGAAATTGTGTTACTAGCCGTAAGCAAAGC 89 15962466 0.754509994 6 81 707 0.900990099 1.356981401 0.059405941 0.078651685 0.188118812 89 7 3 91 3R:15962442-15962481 6 CG4287 FBtr0083240|FBtr0301716 15962165|15962165 15962537|15962537 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 15962440 15962478 3'utr CG4287 FlyBase G39010.1 AAATCATTGAAATTGTGTTACTAGCCGTAAGCAAAGCGA 49 15962466 0.74753803 6 45 386 0.945945946 1.367976785 0.040540541 0.367346939 0.581081081 49 2 2 70 3R:15962440-15962478 6 69 3186 FBgn0038388 224 16.66 25.57666667 0.308035714 4.141656663 2.697771406 1 1 1 0.1 dme-miR-276a-3p 6mer2-7 GTTCCT 3R 15983389 15983394 + 3R_15983389_15983394_+ 0.999999913 0.999998687 0.9999993 8.49E-07 Hel89B FBtr0344471|FBtr0301715 15983324|15983324 15983451|15983451 3R + 15983359 15983431 3'utr Hel89B FlyBase G43231.1 AGGCTACGTTGATCATTTATATTGCCCTCTGTTCCTTTATAATCGCGAAAAGAAACTTTTAGAAATAAATATT 28 15983397 0.982343886 9 28 210 1 1.51851394 0.212121212 0.142857143 0.272727273 28 0 0 33 3R:15983359-15983431 6 Hel89B FBtr0344471|FBtr0301715 15983324|15983324 15983451|15983451 GTTCCT 6mer2-7 dme-miR-276a-3p 3R + 15983348 15983428 3'utr Hel89B FlyBase G32657.1 CTTCCAGTTTTAGGCTACGTTGATCATTTATATTGCCCTCTGTTCCTTTATAATCGCGAAAAGAAACTTTTAGAAATAAAT 25 15983398 0.914708736 10 22 204 0.914285714 1.204119983 0.342857143 0.32 0.514285714 25 2 1 32 3R:15983348-15983428 6 17 3187 FBgn0022787 1806.236667 33.54666667 51.41 0.009411834 0.506756757 0.330674966 -8 -9 -8.5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 16003563 16003569 + 3R_16003563_16003569_+ 0.507030711 0.55508801 0.53105936 0.033981643 srp FBtr0335424 16003135 16004081 3R + 16003393 16003610 stop_codon srp FlyBase G43262.1 CAGCTGCAGCAGCAGACTGCCGCCCTCTTGGGTCAACATGAGCAGCATGTGACCAACTATGCGATGCATAAGTTCGGCGTTGACCGGGAAACAGTGGTGAAGATGGAGTAGGCGCGACACGCTGTATGTCGCACGACCAAAGATTCTGTTGTTACATTAATCTCATAGCTCCAAAGAATTTATAGCCTGTATACCAAGAGCAGTTCTCAAAGAACACT 531 16003549 0.855615541 36 497 3843 0.937791602 2.002166062 0.077760498 0.175141243 0.31881804 531 35 5 603 3R:16003393-16003610 7 srp FBtr0335424 16003135 16004081 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 16003379 16003671 stop_codon srp FlyBase G32683.2 AGCAGCAGCAGCAACAGCTGCAGCAGCAGACTGCCGCCCTCTTGGGTCAACATGAGCAGCATGTGACCAACTATGCGATGCATAAGTTCGGCGTTGACCGGGAAACAGTGGTGAAGATGGAGTAGGCGCGACACGCTGTATGTCGCACGACCAAAGATTCTGTTGTTACATTAATCTCATAGCTCCAAAGAATTTATAGCCTGTATACCAAGAGCAGTTCTCAAAGAACACTCATCTATCTAAAATCTATCGAATCATTAGTTGTACATACGGTCTAAATCGATTGATACTTA 337 16003549 0.9723129 41 313 2355 0.94 1.769007871 0.12 0.367952522 0.574 337 23 7 470 3R:16003379-16003671 7 262.5 3188 FBgn0003507 2528.6 69.84666667 106.7833333 0.103812386 3.758232318 2.45824879 14 14 14 0.1 dme-miR-92b-3p 7mer-m1 TGCAATT 3R 16003938 16003944 + 3R_16003938_16003944_+ 0.765586348 0.765586663 0.765586506 2.83E-07 srp FBtr0335424 16003135 16004081 3R + 16003614 16003963 3'utr srp FlyBase G43262.2 CTATCTAAAATCTATCGAATCATTAGTTGTACATACGGTCTAAATCGATTGATACTTACATTTTCGTCGAATTTTAATGGTCCACTACTCGAAATTTGTTATGAAATACTAGTTTAATTGTTAGCAAAATGCCAACAGCATAAAATCGATTCAGAAACTAGGCTAAGAATGTTCATTTAAAATTTTGTTATCAAATCGAATACCTTTTGAGATTTCCTACAATCAAATTCCACTTAGATATTAGCCACAAATCATAGTTAAGTCAACCAAAAAAAGGCAAATGAAAACGAAAAAGAATAACAATCGAAGTAACCAATAATCTCATGCAATTAGCTATTAATTTATATATT 365 16003930 0.999999402 54 346 2252 0.966442953 2.033423755 0.089485459 0.175342466 0.326621924 365 12 3 432 3R:16003614-16003963 7 srp FBtr0335424 16003135 16004081 TGCAATT 7mer-m1 dme-miR-92b-3p 3R + 16003715 16003963 3'utr srp FlyBase G32683.4 TGAAATACTAGTTTAATTGTTAGCAAAATGCCAACAGCATAAAATCGATTCAGAAACTAGGCTAAGAATGTTCATTTAAAATTTTGTTATCAAATCGAATACCTTTTGAGATTTCCTACAATCAAATTCCACTTAGATATTAGCCACAAATCATAGTTAAGTCAACCAAAAAAAGGCAAATGAAAACGAAAAAGAATAACAATCGAAGTAACCAATAATCTCATGCAATTAGCTATTAATTTATATATT 285 16003938 0.975782655 30 275 1584 0.964370546 2.608526034 0.087885986 0.343859649 0.555819477 285 15 0 406 3R:16003715-16003963 7 216.5 3189 FBgn0003507 2528.6 69.84666667 106.7833333 0.085620501 3.099646845 2.027469955 8 0 4 0.1 dme-bantam-3p 7mer-m8 TGATCTC 3R 16040344 16040350 + 3R_16040344_16040350_+ 0.592918015 0.387800431 0.490359223 0.145040046 pnr FBtr0083220|FBtr0335426|FBtr0083221|FBtr0335427 16040311|16040311|16040311|16040311 16040915|16041796|16040915|16041796 3R + 16040115 16040678 stop_codon pnr FlyBase G43283.1 GCCGCCTACGGCGTAAAGACAGAGGCGAGTGCCACCAACTACGACTATGTGAACAACTGCTACTTTGGGGGCACCTTCGGTGCGCTGGGAGGAGCTGCAACCACAACCGCCATGGCTGGCGGAGCGGCCAGTGAACTGGCTGGCTACCATCACCAGCACAACGTCATCCAGGCAGCCAAACTGATGGCCACCTCGTAAAGTTAAAAATCTGGACACTGGCTCTGTGATGTGATCTCCTTCCTCCTCCTAAACTGCACCCTCACTTGAAGCCTTCCTTGGAATCATGGCATTGAAAAGACTTTAGACATTAGTACTACTCGGCCTTGTTTGCAATTTCGTTTAATTAAGTTTAGCTAATTGTGTGACTTTCTGAAACGTATTTTCGGAATAGCTTAGTTCTAGCTAACTATCATGAATTAGCTATGTTTAATTGAATTTTGGGTCGCAAATGGGGTTTTTTAGTTTAAGAGCTGCCTGAATGGCACTTAGTTTTTATTTCTTGTAAATAACTAATAGCAATTCTTGTTGTACAAATCTGCGTCTATATGTATGTGCTTATCCATC 3121 16040352 0.975810479 109 2977 23191 0.954081633 2.006527163 0.095327605 0.164370394 0.299677766 3121 137 34 3553 3R:16040115-16040678 7 pnr FBtr0083221|FBtr0335427|FBtr0083220|FBtr0335426 16040311|16040311|16040311|16040311 16040915|16041796|16040915|16041796 TGATCTC 7mer-m8 dme-bantam-3p 3R + 16040276 16040522 stop_codon pnr FlyBase G32702.2 CGTCATCCAGGCAGCCAAACTGATGGCCACCTCGTAAAGTTAAAAATCTGGACACTGGCTCTGTGATGTGATCTCCTTCCTCCTCCTAAACTGCACCCTCACTTGAAGCCTTCCTTGGAATCATGGCATTGAAAAGACTTTAGACATTAGTACTACTCGGCCTTGTTTGCAATTTCGTTTAATTAAGTTTAGCTAATTGTGTGACTTTCTGAAACGTATTTTCGGAATAGCTTAGTTCTAGCTAACT 2020 16040352 0.793850014 53 1917 14765 0.950149551 1.979092901 0.083084081 0.361386139 0.571286142 2020 121 29 2859 3R:16040276-16040522 7 998.5 3190 FBgn0003117 3353.65 145.2033333 222.1433333 0.297735303 6.876563899 4.49484567 -8 -8 -8 0.1 dme-miR-14-3p 6mer3-8 AAGACT 3R 16040409 16040414 + 3R_16040409_16040414_+ 0.97921383 0.986456072 0.982834951 0.005121079 pnr FBtr0083220|FBtr0335426|FBtr0083221|FBtr0335427 16040311|16040311|16040311|16040311 16040915|16041796|16040915|16041796 3R + 16040115 16040678 stop_codon pnr FlyBase G43283.1 GCCGCCTACGGCGTAAAGACAGAGGCGAGTGCCACCAACTACGACTATGTGAACAACTGCTACTTTGGGGGCACCTTCGGTGCGCTGGGAGGAGCTGCAACCACAACCGCCATGGCTGGCGGAGCGGCCAGTGAACTGGCTGGCTACCATCACCAGCACAACGTCATCCAGGCAGCCAAACTGATGGCCACCTCGTAAAGTTAAAAATCTGGACACTGGCTCTGTGATGTGATCTCCTTCCTCCTCCTAAACTGCACCCTCACTTGAAGCCTTCCTTGGAATCATGGCATTGAAAAGACTTTAGACATTAGTACTACTCGGCCTTGTTTGCAATTTCGTTTAATTAAGTTTAGCTAATTGTGTGACTTTCTGAAACGTATTTTCGGAATAGCTTAGTTCTAGCTAACTATCATGAATTAGCTATGTTTAATTGAATTTTGGGTCGCAAATGGGGTTTTTTAGTTTAAGAGCTGCCTGAATGGCACTTAGTTTTTATTTCTTGTAAATAACTAATAGCAATTCTTGTTGTACAAATCTGCGTCTATATGTATGTGCTTATCCATC 3121 16040416 0.975810479 109 2977 23191 0.954081633 2.006527163 0.095327605 0.164370394 0.299677766 3121 137 34 3553 3R:16040115-16040678 6 pnr FBtr0083221|FBtr0335427|FBtr0083220|FBtr0335426 16040311|16040311|16040311|16040311 16040915|16041796|16040915|16041796 AAGACT 6mer3-8 dme-miR-14-3p 3R + 16040276 16040522 stop_codon pnr FlyBase G32702.2 CGTCATCCAGGCAGCCAAACTGATGGCCACCTCGTAAAGTTAAAAATCTGGACACTGGCTCTGTGATGTGATCTCCTTCCTCCTCCTAAACTGCACCCTCACTTGAAGCCTTCCTTGGAATCATGGCATTGAAAAGACTTTAGACATTAGTACTACTCGGCCTTGTTTGCAATTTCGTTTAATTAAGTTTAGCTAATTGTGTGACTTTCTGAAACGTATTTTCGGAATAGCTTAGTTCTAGCTAACT 2020 16040416 0.793850014 53 1917 14765 0.950149551 1.979092901 0.083084081 0.361386139 0.571286142 2020 121 29 2859 3R:16040276-16040522 6 1215.5 3191 FBgn0003117 3353.65 145.2033333 222.1433333 0.362440923 8.371019949 5.471692451 -7 -7 -7 0.1 dme-miR-278-3p 6mer3-8 CCCACC 3R 16040803 16040808 + 3R_16040803_16040808_+ 0.999832594 0.999999953 0.999916274 0.00011837 pnr FBtr0083220|FBtr0335426|FBtr0083221|FBtr0335427 16040311|16040311|16040311|16040311 16040915|16041796|16040915|16041796 3R + 16040776 16040917 3'utr pnr FlyBase G43285.1 AAATATTTTATGAGTATTCCGCACTTCCCCACCAACCCACTTAATAGAACATTTAGCAGTTAGTCCTATGTAGAAGTCTAGAATTAATATCGTAGCTCTGATCCATTTAATATGAACGCTAAATAAAGATTGTATTAAACTA 63 16040800 0.815148863 20 59 420 0.93902439 1.187520721 0.036585366 0.238095238 0.414634146 63 1 4 77 3R:16040776-16040917 6 pnr FBtr0083221|FBtr0335427|FBtr0083220|FBtr0335426 16040311|16040311|16040311|16040311 16040915|16041796|16040915|16041796 CCCACC 6mer3-8 dme-miR-278-3p 3R + 16040780 16040916 3'utr pnr FlyBase G32705.1 ATTTTATGAGTATTCCGCACTTCCCCACCAACCCACTTAATAGAACATTTAGCAGTTAGTCCTATGTAGAAGTCTAGAATTAATATCGTAGCTCTGATCCATTTAATATGAACGCTAAATAAAGATTGTATTAAACT 58 16040800 0.772440948 24 51 373 0.870588235 1.86923172 0.094117647 0.344827586 0.552941176 58 11 0 74 3R:16040780-16040916 6 17.5 3192 FBgn0003117 3353.65 145.2033333 222.1433333 0.005218195 0.120520649 0.078777966 3 3 3 0.1 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 16046449 16046456 - 3R_16046449_16046456_- 0.625362912 0.625361132 0.625362022 1.27E-06 ird5 FBtr0304804 16046345 16046579 3R - 16046408 16046484 3'utr ird5 FlyBase G51670.1 TTTGTTATTGCCCGCTTATCCAATTAATTAGCTTTATTAGTTTCATAGAATCTTTAATGTTCTCATTTGGAAACGTT 228 16046457 0.836164252 14 219 2868 0.964143426 2.383815366 0.067729084 0.087719298 0.171314741 228 9 0 242 3R:16046408-16046484 8 ird5 FBtr0304804 16046345 16046579 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R - 16046410 16046471 3'utr ird5 FlyBase G39032.1 GCTTATCCAATTAATTAGCTTTATTAGTTTCATAGAATCTTTAATGTTCTCATTTGGAAACG 141 16046457 0.8355184 10 136 1738 0.954545455 2.276461804 0.060606061 0.290780142 0.494949495 141 9 0 189 3R:16046410-16046471 8 164 3193 FBgn0024222 780.2833333 38.32666667 59.02333333 0.210180063 4.279005044 2.778562151 1 1 1 0.1 dme-miR-304-5p 8mer-A1 TGAGATTA 3R 16060192 16060199 + 3R_16060192_16060199_+ 0.625281035 0.622593942 0.623937488 0.001900067 msps FBtr0301479|FBtr0304803|FBtr0304802|FBtr0301480|FBtr0304801 16059818|16059818|16059818|16059818|16059818 16060675|16060675|16060675|16060675|16060675 3R + 16060162 16060255 3'utr msps FlyBase G43320.1 TGCGATTCAATAAGATTCGATTGGCTGAGTTGAGATTAAAGTGGCGACTGTGACTGAGACCGGGTTCCATTAGACAGCTTGTTAGTTTATGCCT 70 16060191 0.974911574 11 69 456 0.988372093 1.929418926 0.255813953 0.171428571 0.325581395 70 1 0 85 3R:16060162-16060255 8 msps FBtr0304803|FBtr0304802|FBtr0301480|FBtr0304801|FBtr0301479 16059818|16059818|16059818|16059818|16059818 16060675|16060675|16060675|16060675|16060675 TGAGATTA 8mer-A1 dme-miR-304-5p 3R + 16060152 16060256 3'utr msps FlyBase G32731.2 GTGTTTCGTATGCGATTCAATAAGATTCGATTGGCTGAGTTGAGATTAAAGTGGCGACTGTGACTGAGACCGGGTTCCATTAGACAGCTTGTTAGTTTATGCCTA 56 16060191 0.980019838 12 54 360 0.952941176 1.908485019 0.2 0.303571429 0.541176471 56 4 0 81 3R:16060152-16060256 8 34.5 3194 FBgn0027948 3925.543333 64.62 99.02333333 0.008788592 0.533890436 0.348402733 1 1 1 0.1 dme-miR-932-5p 7mer-A1 GAATTGA 3R 16103308 16103314 + 3R_16103308_16103314_+ 0.803028993 0.817119641 0.810074317 0.009963559 Akt1 FBtr0344717|FBtr0083228|FBtr0083226|FBtr0344470|FBtr0083227 16103113|16103113|16103113|16103113|16103113 16105670|16104515|16104515|16104515|16104515 3R + 16103240 16103330 3'utr Akt1 FlyBase G43341.1 ATACCATGATAACGAAGGCAAGCAAAGGGTTTTCTTGCTAGTTTATATACACCAATAATAAGAGAATTGAATTGATAGTAACTTATTTTTG 21 16103306 0.986393958 7 18 153 0.884615385 1.361727836 0.230769231 0.238095238 0.384615385 21 3 0 23 3R:16103240-16103330 7 Akt1 FBtr0083227|FBtr0344717|FBtr0083228|FBtr0083226|FBtr0344470 16103113|16103113|16103113|16103113|16103113 16104515|16105670|16104515|16104515|16104515 GAATTGA 7mer-A1 dme-miR-932-5p 3R + 16103284 16103328 3'utr Akt1 FlyBase G32751.1 ATATACACCAATAATAAGAGAATTGAATTGATAGTAACTTATTTT 16 16103306 0.984172648 5 14 113 0.869565217 1.301029996 0.130434783 0.3125 0.52173913 16 3 0 20 3R:16103284-16103328 7 15.5 3195 FBgn0010379 3175.29 102.15 156.83 0.004881444 0.151737641 0.098833131 2 2 2 0.1 dme-miR-305-3p 6mer3-8 ATGTGC 3R 16103822 16103827 + 3R_16103822_16103827_+ 0.572001722 0.587125705 0.579563714 0.010694283 Akt1 FBtr0344717|FBtr0083228|FBtr0083226|FBtr0344470|FBtr0083227 16103113|16103113|16103113|16103113|16103113 16105670|16104515|16104515|16104515|16104515 3R + 16103792 16103846 3'utr Akt1 FlyBase G43344.1 AAGTTATATATAATGTTAAAATTGCCTCTAATGTGCTGTGCTTTATGCAAAACTA 23 16103823 0.988760011 5 23 222 1 1.414973348 0.076923077 0.130434783 0.230769231 23 0 0 26 3R:16103792-16103846 6 Akt1 FBtr0083227|FBtr0344717|FBtr0083228|FBtr0083226|FBtr0344470 16103113|16103113|16103113|16103113|16103113 16104515|16105670|16104515|16104515|16104515 ATGTGC 6mer3-8 dme-miR-305-3p 3R + 16103810 16103846 3'utr Akt1 FlyBase G32753.1 AAATTGCCTCTAATGTGCTGTGCTTTATGCAAAACTA 18 16103823 0.770886143 4 15 151 0.807692308 1.021189299 0.115384615 0.444444444 0.615384615 18 4 1 21 3R:16103810-16103846 6 19.5 3196 FBgn0010379 3175.29 102.15 156.83 0.006141171 0.190895742 0.124338456 -1 -1 -1 0.1 dme-miR-7-5p 6mer2-7 TCTTCC 3R 16149130 16149135 + 3R_16149130_16149135_+ 0.797504739 0.469000524 0.633252631 0.232287547 CG5916 FBtr0083251|FBtr0344009 16148765|16148765 16149389|16149636 3R + 16149114 16149163 3'utr CG5916 FlyBase G43358.1 AAGTTTCTAGTTGATATCTTCCGCATGTAGTCCAAATAGAGCAAGTACAT 13 16149139 0.980228681 5 13 107 1 1.204119983 0.1875 0.230769231 0.375 13 0 0 16 3R:16149114-16149163 6 CG5916 FBtr0083251|FBtr0344009 16148765|16148765 16149389|16149636 TCTTCC 6mer2-7 dme-miR-7-5p 3R + 16149092 16149155 3'utr CG5916 FlyBase G32760.1 ATGCCGTAGGAGTAGTAGCCAAAAGTTTCTAGTTGATATCTTCCGCATGTAGTCCAAATAGAGC 9 16149132 0.983817658 5 8 65 0.857142857 1.079181246 0.357142857 0.555555556 0.714285714 9 2 0 12 3R:16149092-16149155 6 9.5 3197 FBgn0038401 127.6666667 7.303333333 11.36 0.074412533 1.300775901 0.836267606 -9 -2 -5.5 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 16149241 16149247 + 3R_16149241_16149247_+ 0.661615411 0.661615611 0.661615511 1.41E-07 CG5916 FBtr0083251|FBtr0344009 16148765|16148765 16149389|16149636 3R + 16149221 16149273 3'utr CG5916 FlyBase G43359.1 TTACCCAACAACAAACATTTTGTGTTCTAAGTTATCTTGTTGATCAAAGAAGT 17 16149240 0.707334732 4 17 149 1 1.342422681 0.136363636 0.176470588 0.363636364 17 0 0 22 3R:16149221-16149273 7 CG5916 FBtr0083251|FBtr0344009 16148765|16148765 16149389|16149636 TGTGTTC 7mer-m8 dme-miR-317-3p 3R + 16149222 16149282 3'utr CG5916 FlyBase G32761.1 TACCCAACAACAAACATTTTGTGTTCTAAGTTATCTTGTTGATCAAAGAAGTATTTATTTT 17 16149240 0.98841743 6 16 152 0.96 1.380211242 0.48 0.352941176 0.56 17 1 0 24 3R:16149222-16149282 7 13.5 3198 FBgn0038401 127.6666667 7.303333333 11.36 0.105744125 1.848471018 1.188380282 1 1 1 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3R 16197053 16197059 + 3R_16197053_16197059_+ 0.521223855 0.521223525 0.52122369 2.83E-07 sra FBtr0344473|FBtr0083255 16196914|16196914 16197584|16197584 3R + 16196927 16197076 3'utr sra FlyBase G43368.1 TGACGAAACTAAAGCTGAAAACCTGAGTTGTAAAACCAAACGATCGGGACAACGGGTTGGGACTCATGCTCTGCGGATGGTTGGGGCTTCGATTGAGTATTTTTTGTAAATATTTTCCGATTCAATTGTGATTAATTTACACATACATAT 91 16197052 0.822085075 21 87 770 0.964285714 1.431363764 0.026785714 0.208791209 0.357142857 91 1 3 108 3R:16196927-16197076 7 sra FBtr0344473|FBtr0083255 16196914|16196914 16197584|16197584 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 16196927 16197073 3'utr sra FlyBase G32768.1 TGACGAAACTAAAGCTGAAAACCTGAGTTGTAAAACCAAACGATCGGGACAACGGGTTGGGACTCATGCTCTGCGGATGGTTGGGGCTTCGATTGAGTATTTTTTGTAAATATTTTCCGATTCAATTGTGATTAATTTACACATACA 48 16197052 0.987946693 15 47 421 0.971428571 1.832508913 0.028571429 0.375 0.571428571 48 2 0 68 3R:16196927-16197073 7 54 3199 FBgn0086370 863.5966667 56.39333333 86.18 0.06252919 0.957559995 0.626595498 1 1 1 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 16197311 16197316 + 3R_16197311_16197316_+ 0.999718443 0.99938035 0.999549396 0.000239073 sra FBtr0344473|FBtr0083255 16196914|16196914 16197584|16197584 3R + 16197258 16197343 3'utr sra FlyBase G43369.1 TTGATGTTAAGCCATCGCAAATACCTGCTAACAATATCTACATATATCTCTGTGTACCTTCGACGGGAAATCGCTGACAGAGGCGC 58 16197310 0.966375201 5 56 377 0.972972973 1.556302501 0.189189189 0.224137931 0.391891892 58 1 1 72 3R:16197258-16197343 6 sra FBtr0344473|FBtr0083255 16196914|16196914 16197584|16197584 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 16197257 16197333 3'utr sra FlyBase G32769.1 ATTGATGTTAAGCCATCGCAAATACCTGCTAACAATATCTACATATATCTCTGTGTACCTTCGACGGGAAATCGCTG 33 16197310 0.978098323 3 30 210 0.925 1.091080469 0.225 0.212121212 0.35 33 1 2 37 3R:16197257-16197333 6 38 3200 FBgn0086370 863.5966667 56.39333333 86.18 0.044002023 0.673838515 0.440937573 1 1 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 16197550 16197555 + 3R_16197550_16197555_+ 0.99994901 0.998088403 0.999018707 0.001315643 sra FBtr0344473|FBtr0083255 16196914|16196914 16197584|16197584 3R + 16197520 16197566 3'utr sra FlyBase G43370.1 TTCAAATTCGAAATGAATGTTCTCAAATGTACCAAACAAAACAAAAT 26 16197537 0.967535914 3 25 142 1 1.51851394 0.363636364 0.24 0.424242424 25 0 0 33 3R:16197520-16197566 6 sra FBtr0344473|FBtr0083255 16196914|16196914 16197584|16197584 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 16197483 16197567 3'utr sra FlyBase G32770.1 ATGCCTACGTGTAGTTAAAATTTAAATTGAAAATATATTCAAATTCGAAATGAATGTTCTCAAATGTACCAAACAAAACAAAATG 23 16197537 0.968053673 7 22 129 1 1.544068044 0.428571429 0.454545455 0.657142857 22 0 0 35 3R:16197483-16197567 6 12 3201 FBgn0086370 863.5966667 56.39333333 86.18 0.013895376 0.21279111 0.139243444 13 13 13 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 3R 16204221 16204226 - 3R_16204221_16204226_- 0.999933766 0.998165283 0.999049524 0.001250518 mtSSB FBtr0083277 16204192 16204313 3R - 16204200 16204294 3'utr mtSSB FlyBase G51704.1 AAACCTAATCTTAAGCGAAAAGTTGAACTTGCAGCATTGTAAGCATTTATAATATTCGTTGGATATATTGTGTTATCAGATTACATGCGTAGTCG 38 16204227 0.812079653 9 37 358 0.980769231 1.40654018 0.230769231 0.263157895 0.461538462 38 0 1 51 3R:16204200-16204294 6 mtSSB FBtr0083277 16204192 16204313 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 16204200 16204240 3'utr mtSSB FlyBase G39055.1 TTCGTTGGATATATTGTGTTATCAGATTACATGCGTAGTCG 21 16204227 0.754854867 3 20 223 0.964285714 1.431363764 0.357142857 0.238095238 0.428571429 21 1 0 27 3R:16204200-16204240 6 25 3202 FBgn0010438 497.9633333 116.1266667 178.4933333 0.0502045 0.215282163 0.140061253 1 1 1 0.1 dme-miR-92b-3p 6mer2-7 TGCAAT 3R 16259765 16259770 + 3R_16259765_16259770_+ 1 0.999866624 0.999933312 9.43E-05 tara FBtr0083257|FBtr0083258 16259503|16259503 16260329|16260329 3R + 16259689 16259773 3'utr tara FlyBase G43390.1 CATATATTCGAAAGTCTTGGTCCTAAATACCCCTCTCCCCCTTCCTTCACACAAGCAATCGGGGACACAAATTAATTGCAATCTT 11 16259747 0.953275099 8 11 54 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 3R:16259689-16259773 6 tara FBtr0083257|FBtr0083258 16259503|16259503 16260329|16260329 TGCAAT 6mer2-7 dme-miR-92b-3p 3R + 16259737 16259773 3'utr tara FlyBase G32783.2 ACACAAGCAATCGGGGACACAAATTAATTGCAATCTT 5 16259760 0.81511877 3 3 19 0.777777778 0.84509804 0 0.2 0.555555556 5 2 0 7 3R:16259737-16259773 6 3.5 3203 FBgn0040071 436.6666667 12.95666667 19.84666667 0.008015267 0.270131207 0.176352032 18 5 11.5 0.1 dme-miR-1003-3p 7mer-m8 ATGTGAG 3R 16261385 16261391 - 3R_16261385_16261391_- 0.671796207 0.671796207 0.671796207 0 bor FBtr0305998|FBtr0083276 16261353|16261353 16261833|16261833 3R - 16261380 16261442 3'utr bor FlyBase G51707.1 AACTTCTCGCTGGCTCTTCCACCAATTTCACTTGTCCGCAGTGTTTCCTATATGTGAGTATGA 9 16261392 0.991699553 7 8 82 0.8125 1.113943352 0 0.333333333 0.625 9 3 0 13 3R:16261380-16261442 7 bor FBtr0305998|FBtr0083276 16261353|16261353 16261833|16261833 ATGTGAG 7mer-m8 dme-miR-1003-3p 3R - 16261376 16261413 3'utr bor FlyBase G39057.1 ACTTGTCCGCAGTGTTTCCTATATGTGAGTATGAAGTA 7 16261394 0.63094883 5 6 58 1 0.954242509 0.333333333 0.285714286 0.444444444 7 0 0 9 3R:16261376-16261413 7 6 3204 FBgn0040237 972.07 49.02666667 75.33333333 0.006172395 0.122382377 0.079646018 1 3 2 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 16261629 16261635 - 3R_16261629_16261635_- 0.661614096 0.661615353 0.661614724 9.19E-07 bor FBtr0305998|FBtr0083276 16261353|16261353 16261833|16261833 3R - 16261599 16261653 3'utr bor FlyBase G51710.1 TAATCGTTGGCGGGAAGATGTGTTCGTCTATAGATACAATTAAGTTTGACCCACA 17 16261635 0.981362043 6 17 122 1 1.255272505 0.222222222 0.058823529 0.111111111 17 0 0 18 3R:16261599-16261653 7 bor FBtr0305998|FBtr0083276 16261353|16261353 16261833|16261833 TGTGTTC 7mer-m8 dme-miR-317-3p 3R - 16261614 16261657 3'utr bor FlyBase G39060.1 TACATAATCGTTGGCGGGAAGATGTGTTCGTCTATAGATACAAT 17 16261635 0.875882511 3 16 126 0.961538462 1.397940009 0.461538462 0.411764706 0.615384615 17 1 0 25 3R:16261614-16261657 7 16 3205 FBgn0040237 972.07 49.02666667 75.33333333 0.01645972 0.326353005 0.212389381 0 0 0 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 16266854 16266859 + 3R_16266854_16266859_+ 0.968827784 0.819881969 0.894354876 0.105320585 asun FBtr0083259 16266545 16266891 3R + 16266834 16266866 3'utr asun FlyBase G43394.1 TTTTTTTTAACTTGTGATTGTGATCTTTGGCAC 9 16266852 0.653972491 3 7 100 0.8 0.602059991 0.3 0.111111111 0.2 9 1 1 8 3R:16266834-16266866 6 asun FBtr0083259 16266545 16266891 TGATCT 6mer3-8 dme-bantam-3p 3R + 16266838 16266870 3'utr asun FlyBase G32785.1 TTTTAACTTGTGATTGTGATCTTTGGCACGGTA 6 16266853 0.67946575 4 6 59 1 0.903089987 0.25 0.333333333 0.5 6 0 0 8 3R:16266838-16266870 6 7.5 3206 FBgn0020407 250 12.17666667 18.69333333 0.03 0.615932111 0.401212553 2 1 1.5 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 16302429 16302435 + 3R_16302429_16302435_+ 0.658986817 0.504275138 0.581630977 0.109397692 gish FBtr0083263|FBtr0334606 16301873|16301873 16302721|16304768 3R + 16302392 16302496 3'utr gish FlyBase G43414.1 CGACACGGCGACTCAAGCCAGAATCACTCACAGCCAGGGCAGCTCCTCCCGTTGGTGTCTTGTGAAGGGAGTCGGAATGAAAGCTCCCCAAAATCACTACCACTA 42 16302438 0.95102881 9 34 147 0.823529412 1.62324929 0.215686275 0.166666667 0.31372549 42 9 0 42 3R:16302392-16302496 7 gish FBtr0334606|FBtr0083263 16301873|16301873 16304768|16302721 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 16302406 16302450 3'utr gish FlyBase G32805.1 AAGCCAGAATCACTCACAGCCAGGGCAGCTCCTCCCGTTGGTGTC 16 16302438 0.677728476 4 14 49 0.954545455 1.322219295 0.181818182 0.25 0.454545455 16 1 0 21 3R:16302406-16302450 7 25 3207 FBgn0250823 3945.283333 157.2966667 241.69 0.006336681 0.158935345 0.103438289 -9 -9 -9 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 16303469 16303475 + 3R_16303469_16303475_+ 0.658999459 0.658998396 0.658998927 7.78E-07 gish FBtr0334606 16301873 16304768 3R + 16303447 16303492 3'utr gish FlyBase G43416.1 AGATATACAGTATGAATCAATAGGCAGCTTGGTTTAGCTCTGTTTT 20 16303467 0.936824512 2 19 151 0.961538462 1.397940009 0.076923077 0.25 0.423076923 20 1 0 25 3R:16303447-16303492 7 gish FBtr0334606 16301873 16304768 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 16303455 16303490 3'utr gish FlyBase G32809.1 AGTATGAATCAATAGGCAGCTTGGTTTAGCTCTGTT 19 16303467 0.930434057 2 19 123 1 1.361727836 0.043478261 0.157894737 0.304347826 19 0 0 23 3R:16303455-16303490 7 19.5 3208 FBgn0250823 3945.283333 157.2966667 241.69 0.004942611 0.123969569 0.080681865 2 2 2 0.1 dme-miR-14-3p 7mer-m8 AAGACTG 3R 16311066 16311072 - 3R_16311066_16311072_- 0.522318229 0.542262722 0.532290476 0.014102891 Sulf1 FBtr0334699|FBtr0083273|FBtr0334700 16310540|16310540|16310540 16311180|16311180|16311180 3R - 16311047 16311155 3'utr Sulf1 FlyBase G51728.1 ACATATCCAATGCGTATCCTTTGTACCTTGCTTGCCCGCTTCTAATCTTTGGTTTGCCCCATTTAATGTTTTCATACATAAATAAGACTGTGTTTTAATCTATATTCGT 126 16311064 0.688923571 17 117 1143 0.939189189 2.1430148 0.27027027 0.134920635 0.263513514 126 9 0 139 3R:16311047-16311155 7 Sulf1 FBtr0334700|FBtr0083273|FBtr0334699 16310540|16310540|16310540 16311180|16311180|16311180 AAGACTG 7mer-m8 dme-miR-14-3p 3R - 16311048 16311091 3'utr Sulf1 FlyBase G39072.1 AATGTTTTCATACATAAATAAGACTGTGTTTTAATCTATATTCG 62 16311064 0.651622545 8 56 492 0.896551724 1.591064607 0.022988506 0.322580645 0.517241379 62 8 1 78 3R:16311048-16311091 7 63 3209 FBgn0040271 314.1 7.876666667 12.08 0.200573066 7.998307237 5.215231788 -8 -8 -8 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 16311128 16311133 - 3R_16311128_16311133_- 0.999902275 0.998350082 0.999126179 0.001097571 Sulf1 FBtr0334699|FBtr0083273|FBtr0334700 16310540|16310540|16310540 16311180|16311180|16311180 3R - 16311047 16311155 3'utr Sulf1 FlyBase G51728.1 ACATATCCAATGCGTATCCTTTGTACCTTGCTTGCCCGCTTCTAATCTTTGGTTTGCCCCATTTAATGTTTTCATACATAAATAAGACTGTGTTTTAATCTATATTCGT 126 16311134 0.688923571 17 117 1143 0.939189189 2.1430148 0.27027027 0.134920635 0.263513514 126 9 0 139 3R:16311047-16311155 6 Sulf1 FBtr0334700|FBtr0083273|FBtr0334699 16310540|16310540|16310540 16311180|16311180|16311180 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 16311105 16311152 3'utr Sulf1 FlyBase G39073.1 TATCCAATGCGTATCCTTTGTACCTTGCTTGCCCGCTTCTAATCTTTG 30 16311134 0.659523187 7 28 303 0.936170213 1.643452676 0.574468085 0.466666667 0.659574468 30 3 0 44 3R:16311105-16311152 6 45.5 3210 FBgn0040271 314.1 7.876666667 12.08 0.144858325 5.776555226 3.766556291 1 1 1 0.1 dme-miR-970-3p 6mer3-8 TCTTAT 3R 16340223 16340228 - 3R_16340223_16340228_- 0.995245001 0.69193583 0.843590416 0.214471992 SF2 FBtr0083272|FBtr0304727 16340125|16338941 16340653|16340653 3R - 16340175 16340235 3'utr SF2 FlyBase G51732.1 TTATAACTCTTATTTTGGCTGCACGTTTTCCAAGCTAATTTATTAGAATCTACCTTAACGA 12 16340221 0.72413579 8 12 118 1 1.146128036 0 0.083333333 0.214285714 12 0 0 14 3R:16340175-16340235 6 SF2 FBtr0083272|FBtr0304727 16340125|16338941 16340653|16340653 TCTTAT 6mer3-8 dme-miR-970-3p 3R - 16340205 16340233 3'utr SF2 FlyBase G39075.1 ATAACTCTTATTTTGGCTGCACGTTTTCC 5 16340221 0.696935597 4 5 47 1 0.698970004 0 0 0 5 0 0 5 3R:16340205-16340233 6 6 3211 FBgn0040284 2524.346667 202.5 310.52 0.002376853 0.02962963 0.019322427 -7 -7 -7 0.1 dme-miR-317-5p 6mer3-8 GTATCC 3R 16345443 16345448 + 3R_16345443_16345448_+ 0.986638637 0.995523896 0.991081266 0.006282856 pad FBtr0301514 16345403 16345829 3R + 16345407 16345551 3'utr pad FlyBase G43431.1 AGTCCTTAAGCTCGAAAAGTGAATCCACCTTACCTCGTATCCTAGTCCGCGGTCTATTCCAACATCTGGTCGCCAGTTCCTTGTATTGTATAGTTTTCGGTAAATTTTCCTTTTAATTTTCTTTGTGCAATATTATTTATAGCAA 66 16345446 0.844306844 20 61 588 0.906666667 1.531478917 0.066666667 0.136363636 0.24 66 6 1 68 3R:16345407-16345551 6 pad FBtr0301514 16345403 16345829 GTATCC 6mer3-8 dme-miR-317-5p 3R + 16345398 16345464 stop_codon pad FlyBase G32816.1 AAAGTAATTAGTCCTTAAGCTCGAAAAGTGAATCCACCTTACCTCGTATCCTAGTCCGCGGTCTATT 27 16345445 0.986547304 9 24 177 0.861111111 1.491361694 0.027777778 0.259259259 0.444444444 27 5 0 31 3R:16345398-16345464 6 25.5 3212 FBgn0038418 118 4.38 6.753333333 0.216101695 5.821917808 3.775913129 -3 -2 -2.5 0.1 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 16345740 16345745 + 3R_16345740_16345745_+ 0.865025486 0.878485496 0.871755491 0.009517657 pad FBtr0301514 16345403 16345829 3R + 16345708 16345812 3'utr pad FlyBase G43432.1 GTAAATATCTGTGTATCTATTATGTATGTACAAGCTGTAGCTGTAAACAATGGTAAAAATACCTTTTTTGGGTGAAGAAAATGATTCCATTGCAAAAATAAATAT 34 16345743 0.967865666 6 33 186 1 1.602059991 0.15 0.117647059 0.25 34 0 0 40 3R:16345708-16345812 6 pad FBtr0301514 16345403 16345829 AGCTGT 6mer3-8 dme-miR-1008-3p 3R + 16345729 16345803 3'utr pad FlyBase G32818.2 ATGTATGTACAAGCTGTAGCTGTAAACAATGGTAAAAATACCTTTTTTGGGTGAAGAAAATGATTCCATTGCAAA 26 16345743 0.976712977 4 23 133 0.930232558 1.124938737 0.069767442 0.461538462 0.674418605 26 1 2 40 3R:16345729-16345803 6 25 3213 FBgn0038418 118 4.38 6.753333333 0.211864407 5.707762557 3.701875617 -3 -3 -3 0.1 dme-miR-1006-3p 8mer-A1 CGAATTTA 3R 16350969 16350976 - 3R_16350969_16350976_- 0.671697493 0.561266758 0.616482126 0.078086297 CG10311 FBtr0083324|FBtr0345202 16350904|16350784 16351129|16351129 3R - 16350916 16351061 3'utr CG10311 FlyBase G51743.1 TCCTAGCTTCCTATGTTCGTTTTTAGTGATTATGTCTAACTAATAATTATAATTTAGTTGAGGCGAGCCAGCCCTTCGCTCACATCGAATTTACGCGGCCCGTGGCATTAAGTGCAATGGAATTATGTATTTAACATTTAAATAAA 17 16350977 0.986917487 9 14 128 0.888888889 1.204119983 0 0.058823529 0.111111111 17 2 0 16 3R:16350916-16351061 8 CG10311 FBtr0345202|FBtr0083324 16350784|16350904 16351129|16351129 CGAATTTA 8mer-A1 dme-miR-1006-3p 3R - 16350926 16351004 3'utr CG10311 FlyBase G39084.1 TTGAGGCGAGCCAGCCCTTCGCTCACATCGAATTTACGCGGCCCGTGGCATTAAGTGCAATGGAATTATGTATTTAACA 19 16350977 0.971104192 9 16 95 0.793103448 1.361727836 0.310344828 0.421052632 0.620689655 19 6 0 23 3R:16350926-16351004 8 8.5 3214 FBgn0038420 2 0.253333333 0.403333333 4.25 33.55263158 21.07438017 1 1 1 0.1 dme-miR-277-3p 6mer3-8 TGCATT 3R 16351095 16351100 - 3R_16351095_16351100_- 0.999745875 0.999676953 0.999711414 4.87E-05 CG10311 FBtr0083324|FBtr0345202 16350904|16350784 16351129|16351129 3R - 16351087 16351146 stop_codon CG10311 FlyBase G51744.1 AGCCGTACCGTCGCTAGAATCTCCAGGAGCACTATTCATCAGAAATTGCATTCAAGAAGC 17 16351101 0.758804996 6 17 79 1 1.278753601 0 0.117647059 0.210526316 17 0 0 19 3R:16351087-16351146 6 CG10311 FBtr0345202|FBtr0083324 16350784|16350904 16351129|16351129 TGCATT 6mer3-8 dme-miR-277-3p 3R - 16351087 16351115 3'utr CG10311 FlyBase G39085.1 CTATTCATCAGAAATTGCATTCAAGAAGC 8 16351101 0.82017376 2 7 41 1 1.041392685 0 0.375 0.545454545 8 0 0 11 3R:16351087-16351115 6 9 3215 FBgn0038420 2 0.253333333 0.403333333 4.5 35.52631579 22.31404959 1 1 1 0.1 dme-miR-184-5p 6mer3-8 TGATAA 3R 16357994 16357999 - 3R_16357994_16357999_- 0.999950579 1 0.999975289 3.49E-05 CG17931 FBtr0332177|FBtr0345208 16357608|16357533 16358541|16358541 3R - 16357988 16358023 3'utr CG17931 FlyBase G51747.1 CGCCGAAGAGAGAGATATAAAGATTGATAATCCCAG 12 16358006 0.963047867 4 11 56 0.923076923 1.079181246 0.307692308 0.083333333 0.153846154 12 1 0 12 3R:16357988-16358023 6 CG17931 FBtr0345208|FBtr0332177 16357533|16357608 16358541|16358541 TGATAA 6mer3-8 dme-miR-184-5p 3R - 16357985 16358029 3'utr CG17931 FlyBase G39089.1 TATGGTCGCCGAAGAGAGAGATATAAAGATTGATAATCCCAGAGC 5 16358006 0.975521942 3 4 27 0.833333333 0.698970004 0.166666667 0.2 0.333333333 5 1 0 5 3R:16357985-16358029 6 8.5 3216 FBgn0038421 429.6933333 71.91666667 110.2133333 0.01978155 0.118192352 0.077123155 7 7 7 0.1 dme-miR-283-5p 7mer-A1 GATATTA 3R 16358359 16358365 - 3R_16358359_16358365_- 0.782911819 0.782911779 0.782911799 0 CG17931 FBtr0332177|FBtr0345208|FBtr0083323 16357608|16357533|16358138 16358541|16358541|16358541 3R - 16358148 16358383 3'utr CG17931 FlyBase G51748.1 TGTATACAACTACGCATAGATATTACCGGGCTGTACAGCACGCGACATAGCAATAGCAATAGCAAGTGCCACCCAAGGACTTCGATTCTGTTCCGGTTTTTGTTCATTTTCGTTTGCAGTGCTGCTGTACGATAATTAAGTAATCTTACATTTTATTTCTCCACCTACCTGACTAAATTATTTACTGTAATGTATATATATAAATTTTCAAATAAAACATAATATGCAGCCGACAG 233 16358361 0.897830772 39 216 1412 0.919413919 1.320492475 0.124542125 0.141630901 0.267399267 233 11 11 251 3R:16358148-16358383 7 CG17931 FBtr0083323|FBtr0345208|FBtr0332177 16358138|16357533|16357608 16358541|16358541|16358541 GATATTA 7mer-A1 dme-miR-283-5p 3R - 16358240 16358378 3'utr CG17931 FlyBase G39091.1 ACAACTACGCATAGATATTACCGGGCTGTACAGCACGCGACATAGCAATAGCAATAGCAAGTGCCACCCAAGGACTTCGATTCTGTTCCGGTTTTTGTTCATTTTCGTTTGCAGTGCTGCTGTACGATAATTAAGTAAT 85 16358352 0.74668833 15 80 465 0.937984496 2.08278537 0.108527132 0.458823529 0.643410853 85 8 0 121 3R:16358240-16358378 7 89 3217 FBgn0038421 429.6933333 71.91666667 110.2133333 0.207124461 1.237543453 0.8075248 -4 -13 -8.5 0.1 dme-miR-252-5p 7mer-m8 GTACTTA 3R 16434643 16434649 + 3R_16434643_16434649_+ 0.5882999 0.588299583 0.588299742 2.12E-07 CG17565 FBtr0083286 16434515 16434740 3R + 16434624 16434668 3'utr CG17565 FlyBase G43447.1 TTTCGCTTCTTGTATAAATGTACTTATTGGAAAAGGAATTGATTA 14 16434642 0.987908723 4 14 131 1 1.204119983 0.1875 0.071428571 0.1875 14 0 0 16 3R:16434624-16434668 7 CG17565 FBtr0083286 16434515 16434740 GTACTTA 7mer-m8 dme-miR-252-5p 3R + 16434616 16434661 3'utr CG17565 FlyBase G32828.1 ATTGTATTTTTCGCTTCTTGTATAAATGTACTTATTGGAAAAGGAA 17 16434642 0.986627752 3 16 140 0.954545455 1.322219295 0.227272727 0.235294118 0.409090909 17 1 0 21 3R:16434616-16434661 7 15.5 3218 FBgn0038424 261 20.12666667 30.60666667 0.059386973 0.770122557 0.506425615 1 1 1 0.1 dme-miR-8-3p 6mer2-7 AGTATT 3R 16445741 16445746 - 3R_16445741_16445746_- 1 0.999894731 0.999947365 7.45E-05 Pak3 FBtr0330047|FBtr0305003 16445005|16445005 16451158|16451200 3R - 16445725 16445762 3'utr Pak3 FlyBase G51780.1 AAGGCAACGAACGGATAGTATTTTGGGGCAGTAGAAAC 10 16445746 0.97352246 2 9 55 0.916666667 1.041392685 0.333333333 0.2 0.333333333 10 1 0 11 3R:16445725-16445762 6 Pak3 FBtr0330047|FBtr0305003 16445005|16445005 16451158|16451200 AGTATT 6mer2-7 dme-miR-8-3p 3R - 16445730 16445763 3'utr Pak3 FlyBase G39112.1 CAAGGCAACGAACGGATAGTATTTTGGGGCAGTA 9 16445740 0.975775387 3 8 52 0.866666667 0.636822098 0 0.666666667 0.8 9 0 2 13 3R:16445730-16445763 6 9.5 3219 FBgn0044826 2696.55 65.35333333 100.3933333 0.00352302 0.145363664 0.094627797 0 -6 -3 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3R 16446862 16446868 - 3R_16446862_16446868_- 0.521223834 0.521223855 0.521223845 7.07E-08 Pak3 FBtr0330047|FBtr0083312|FBtr0305003 16445005|16446744|16445005 16451158|16451200|16451200 3R - 16446820 16447121 3'utr Pak3 FlyBase G51784.1 GGACAGAGAGATGAGCAGGGGCCGAAAAACTCGAAGGAAACCGTCGCCAAACCGTGGATCCATATCGCATCGCTCGAGCAGTTCATCGATGGCAGGGGGGCGGGGTTATCGCTTAGATTAGATTGTCCTATGGCAAATTAGCTTACTTCAACAACGCACACAAACACGCACATATGATATACATAGATACTGTATTATTAAATGTAGGGACATAAGTTTGATTACTCTTTATATACCCGTATATATACATAATTGTGATTTAAGCGATTTTATCAAATCAGCATTATGCGACTCTTTATAAA 195 16446844 0.985377625 40 186 1526 0.960352423 1.861335239 0.145374449 0.138461538 0.259911894 195 7 2 218 3R:16446820-16447121 7 Pak3 FBtr0330047|FBtr0083312|FBtr0305003 16445005|16446744|16445005 16451158|16451200|16451200 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 16446798 16446902 3'utr Pak3 FlyBase G39114.1 GATTACTCTTTATATACCCGTATATATACATAATTGTGATTTAAGCGATTTTATCAAATCAGCATTATGCGACTCTTTATAAAATTCGTCGTAGTCAGTAAGTGC 46 16446862 0.984882078 10 44 400 0.971830986 1.838849091 0.070422535 0.413043478 0.61971831 46 2 0 69 3R:16446798-16446902 7 43 3220 FBgn0044826 2696.55 65.35333333 100.3933333 0.015946302 0.657961848 0.428315293 -24 -6 -15 0.1 dme-miR-305-5p 6mer2-7 GTACAA 3R 16451021 16451026 - 3R_16451021_16451026_- 0.99999377 1 0.999996885 4.38E-06 Pak3 FBtr0330047|FBtr0083312|FBtr0305003 16445005|16446744|16445005 16451158|16451200|16451200 3R - 16451018 16451090 5'utr Pak3 FlyBase G51785.1 GTTTTGTGTGGACGAAACCGGAACTGGAACTGGAATAGAATGCTGACCGTAGTCTTTGTAGTATGTACAACCG 15 16451035 0.716082658 9 13 87 0.888888889 1.204119983 0.166666667 0.133333333 0.277777778 15 2 0 16 3R:16451018-16451090 6 Pak3 FBtr0330047|FBtr0083312|FBtr0305003 16445005|16446744|16445005 16451158|16451200|16451200 GTACAA 6mer2-7 dme-miR-305-5p 3R - 16451023 16451086 5'utr Pak3 FlyBase G39115.1 TGTGTGGACGAAACCGGAACTGGAACTGGAATAGAATGCTGACCGTAGTCTTTGTAGTATGTAC 18 16451035 0.92171435 9 17 110 0.958333333 1.06069784 0.208333333 0.277777778 0.458333333 18 0 1 23 3R:16451023-16451086 3 2 3221 FBgn0044826 2696.55 65.35333333 100.3933333 0.000741688 0.030602877 0.019921642 9 9 9 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 16457729 16457736 + 3R_16457729_16457736_+ 0.625362451 0.625364218 0.625363335 1.20E-06 CG14883 FBtr0083291 16457662 16458233 3R + 16457716 16457917 3'utr CG14883 FlyBase G43455.1 TACACAAACTGTTTGCATTTAGCTGGCAGAGCTTAGCCCTTAAGACAAACTTAAGTACGCATGTGTTTTTGTAGAAGCTTTAGAAAGTATTATCCCAAGCTTACCGGTACCAGTGAAATGGAAGATATAATTTAGATAGTTTATGTGCTTTACTTTTGTTTACCTGAAGCTTTTATTCATTTTATTGACGTCCTAATTTATT 210 16457728 0.876746571 28 204 1817 0.971428571 2.376576957 0.155102041 0.142857143 0.265306122 210 7 0 238 3R:16457716-16457917 8 CG14883 FBtr0083291 16457662 16458233 TGCATTTA 8mer-A1 dme-miR-277-3p 3R + 16457653 16457756 stop_codon CG14883 FlyBase G32834.1 TGAAAGCCTAAGAGTCCTTCAGGATTTGAACGAACGATAACGACTTAGATCGACGCACACACATACACAAACTGTTTGCATTTAGCTGGCAGAGCTTAGCCCTT 53 16457728 0.984126712 11 50 389 0.935064935 1.556302501 0.220779221 0.320754717 0.532467532 53 4 1 72 3R:16457653-16457756 8 51 3222 FBgn0038432 123 8.256666667 12.72666667 0.414634146 6.176826807 4.007333683 1 1 1 0.1 dme-miR-317-5p 7mer-A1 TATCCCA 3R 16457806 16457812 + 3R_16457806_16457812_+ 0.690985834 0.806812469 0.748899151 0.081901845 CG14883 FBtr0083291 16457662 16458233 3R + 16457716 16457917 3'utr CG14883 FlyBase G43455.1 TACACAAACTGTTTGCATTTAGCTGGCAGAGCTTAGCCCTTAAGACAAACTTAAGTACGCATGTGTTTTTGTAGAAGCTTTAGAAAGTATTATCCCAAGCTTACCGGTACCAGTGAAATGGAAGATATAATTTAGATAGTTTATGTGCTTTACTTTTGTTTACCTGAAGCTTTTATTCATTTTATTGACGTCCTAATTTATT 210 16457816 0.876746571 28 204 1817 0.971428571 2.376576957 0.155102041 0.142857143 0.265306122 210 7 0 238 3R:16457716-16457917 7 CG14883 FBtr0083291 16457662 16458233 TATCCCA 7mer-A1 dme-miR-317-5p 3R + 16457774 16457841 3'utr CG14883 FlyBase G32835.1 GCATGTGTTTTTGTAGAAGCTTTAGAAAGTATTATCCCAAGCTTACCGGTACCAGTGAAATGGAAGAT 36 16457816 0.847291415 10 35 241 0.982758621 1.755874856 0.25862069 0.472222222 0.672413793 36 1 0 57 3R:16457774-16457841 7 42 3223 FBgn0038432 123 8.256666667 12.72666667 0.341463415 5.086798547 3.30015715 -10 -10 -10 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 16458164 16458169 + 3R_16458164_16458169_+ 0.931835102 0.947878412 0.939856757 0.011344326 CG14883 FBtr0083291 16457662 16458233 3R + 16458135 16458252 3'utr CG14883 FlyBase G43458.1 GTTTACCAGCATTATATGTATATGTCTATACCAAAAACCAGAATTAAAAACTACTTTTATTGTGATTATAAAAGAAAATAAAGATGATTGCAACGATTGATTTAAGTTCATACACCTG 33 16458163 0.955762528 13 30 236 0.9 1.255272505 0.275 0.181818182 0.325 33 3 1 36 3R:16458135-16458252 6 CG14883 FBtr0083291 16457662 16458233 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 16458150 16458209 3'utr CG14883 FlyBase G32839.1 ATGTATATGTCTATACCAAAAACCAGAATTAAAAACTACTTTTATTGTGATTATAAAAGA 9 16458163 0.917966287 5 9 67 1 1.079181246 0.25 0.222222222 0.416666667 9 0 0 12 3R:16458150-16458209 6 9 3224 FBgn0038432 123 8.256666667 12.72666667 0.073170732 1.09002826 0.707176532 1 1 1 0.1 dme-miR-980-5p 7mer-m1 AAAAACT 3R 16458393 16458399 - 3R_16458393_16458399_- 0.765586608 0.761877898 0.763732253 0.002622447 CG42232 FBtr0290134 16458278 16458598 3R - 16458373 16458505 3'utr CG42232 FlyBase G51802.1 ATTTATGTATCAATTAATGAAGGCGTGTTATTTTTTAATTTCTCTTGTTAATCCAACCCATTTCGGTGGGATACCGTTGAATGGAATGGCTCCCCTCGCTCAGAACAAAAACTAACCTTAATAGATTTAAGGC 36 16458392 0.971108051 16 34 228 0.947368421 1.255272505 0.105263158 0.055555556 0.105263158 36 1 1 36 3R:16458373-16458505 7 CG42232 FBtr0290134 16458278 16458598 AAAAACT 7mer-m1 dme-miR-980-5p 3R - 16458363 16458428 3'utr CG42232 FlyBase G39127.1 TGAATGGAATGGCTCCCCTCGCTCAGAACAAAAACTAACCTTAATAGATTTAAGGCATTTAAAAAT 20 16458420 0.960929876 11 19 95 0.966666667 1.462397998 0.333333333 0.45 0.633333333 20 1 0 29 3R:16458363-16458428 7 16 3225 FBgn0250754 5895.886667 65.18333333 100.1066667 0.002713756 0.245461519 0.159829515 -7 21 7 0.1 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3R 16482871 16482876 - 3R_16482871_16482876_- 0.657790421 0.981813572 0.819801996 0.229119002 Der-2 FBtr0083307 16482692 16483028 3R - 16482854 16482908 3'utr Der-2 FlyBase G51856.1 TGAGAGAAAGGCGTGCAATAGTTAGCCAAAGTTGGTGCAGAGCGTGTGTGTATGT 33 16482876 0.942758367 5 32 176 0.925 0.966141733 0.15 0.181818182 0.325 33 0 3 37 3R:16482854-16482908 6 Der-2 FBtr0083307 16482692 16483028 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3R - 16482845 16482896 3'utr Der-2 FlyBase G39165.1 GTGCAATAGTTAGCCAAAGTTGGTGCAGAGCGTGTGTGTATGTCATTTATTG 24 16482876 0.735260277 7 23 129 0.947368421 1.556302501 0.184210526 0.5 0.684210526 24 2 0 36 3R:16482845-16482896 6 27 3226 FBgn0038438 365.7166667 32.3 49.50333333 0.073827644 0.835913313 0.545417817 0 0 0 0.1 dme-bantam-3p 8mer-A1 TGATCTCA 3R 16642258 16642265 + 3R_16642258_16642265_+ 0.631136303 0.63113637 0.631136336 7.07E-08 nonA-l FBtr0333727|FBtr0083335 16642219|16642219 16643112|16642773 3R + 16642183 16642323 stop_codon nonA-l FlyBase G43468.1 ACGGACACATTGATTCATGGGGACACCGACGCTTCTAGACACTGAAACCTATATAGATAGCGACGAAAACAATAGTGATCTCATTAGTTACGCATAATATCGGACATTTCGCTCGGCTATGCGTGAACAATAACATAAATA 632 16642255 0.928516887 20 623 4300 0.987359551 2.545925329 0.130617978 0.109177215 0.209269663 632 8 1 703 3R:16642183-16642323 8 nonA-l FBtr0333727|FBtr0083335 16642219|16642219 16643112|16642773 TGATCTCA 8mer-A1 dme-bantam-3p 3R + 16642125 16642324 stop_codon nonA-l FlyBase G32850.1 AGCAACAATTCAACAATGGCTGGACCTGGAGGTCCAGATAATAGCGACGGAAACCAACACGGACACATTGATTCATGGGGACACCGACGCTTCTAGACACTGAAACCTATATAGATAGCGACGAAAACAATAGTGATCTCATTAGTTACGCATAATATCGGACATTTCGCTCGGCTATGCGTGAACAATAACATAAATAA 350 16642256 0.97857187 21 336 2267 0.960227273 1.75076545 0.164772727 0.388571429 0.59469697 350 13 8 507 3R:16642125-16642324 8 469.5 3227 FBgn0015520 285.6666667 13.51 20.79666667 1.643523921 34.75203553 22.57573329 3 2 2.5 0.1 dme-miR-31a-5p 7mer-A1 CTTGCCA 3R 16644817 16644823 + 3R_16644817_16644823_+ 0.477825611 0.726848412 0.602337011 0.176085711 CG10326 FBtr0083336|FBtr0333728 16644750|16644750 16645171|16645171 3R + 16644768 16644882 3'utr CG10326 FlyBase G43474.1 AAACTCATCACCATTTGACCAAAAATATAAAACATGCCTAAGTCATCTACTTGCCATTATGCACACATCGCATCACTAAATCACACATTAGGCGCATTGAATTTGAAACTATAAA 19 16644815 0.758719376 13 16 106 0.875 1.021189299 0.291666667 0.210526316 0.375 19 2 1 21 3R:16644768-16644882 7 CG10326 FBtr0333728|FBtr0083336 16644750|16644750 16645171|16645171 CTTGCCA 7mer-A1 dme-miR-31a-5p 3R + 16644750 16644840 stop_codon CG10326 FlyBase G32854.1 AAAGGAAAGCAACCAGATAAACTCATCACCATTTGACCAAAAATATAAAACATGCCTAAGTCATCTACTTGCCATTATGCACACATCGCAT 11 16644816 0.991697811 7 8 78 0.777777778 1.146128036 0.055555556 0.545454545 0.722222222 11 4 0 14 3R:16644750-16644840 7 6.5 3228 FBgn0038453 605.7533333 63.22 96.46 0.01073044 0.102815565 0.067385445 2 1 1.5 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3R 16645060 16645066 + 3R_16645060_16645066_+ 0.521217475 0.521099347 0.521158411 8.36E-05 CG10326 FBtr0083336|FBtr0333728 16644750|16644750 16645171|16645171 3R + 16644930 16645149 3'utr CG10326 FlyBase G43475.1 AACTAGCAAATCCGTGGTTCTGGCCCCATCACATCTCCTACTATAAGTTTGTAACATGTAAGACAGAAGTATTCTCGAAACGAGGCGTACGGAGAGAGAAAAAAACGCGCAACAAAAGACAAGGCATTTTTGTGATTATTTTGTGAGTTAATTGAAATTTATGATAATCCCAAGTAAGATAAAAAAAGGAACTTAAGCGTCTAATGAACTATATTTAAAT 229 16645059 0.989504324 28 216 2102 0.952702703 2.149219113 0.097972973 0.227074236 0.402027027 229 13 1 282 3R:16644930-16645149 7 CG10326 FBtr0333728|FBtr0083336 16644750|16644750 16645171|16645171 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 16644978 16645135 3'utr CG10326 FlyBase G32855.1 TTGTAACATGTAAGACAGAAGTATTCTCGAAACGAGGCGTACGGAGAGAGAAAAAAACGCGCAACAAAAGACAAGGCATTTTTGTGATTATTTTGTGAGTTAATTGAAATTTATGATAATCCCAAGTAAGATAAAAAAAGGAACTTAAGCGTCTAATG 134 16645059 0.989444456 17 124 1189 0.93442623 1.755874856 0.202185792 0.305970149 0.491803279 134 10 2 171 3R:16644978-16645135 7 146 3229 FBgn0038453 605.7533333 63.22 96.46 0.241022198 2.309395761 1.513580759 1 1 1 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 3R 16649933 16649939 + 3R_16649933_16649939_+ 0.587967464 0.547158194 0.567562829 0.028856533 Cctgamma FBtr0302370|FBtr0083338|FBtr0302371|FBtr0083337 16649738|16649738|16649738|16649738 16649978|16649978|16649978|16649978 3R + 16649921 16649957 3'utr Cctgamma FlyBase G43487.1 ACAAAATTCAAATGCATTTGCTCTCATTAACAGTACA 35 16649938 0.717592436 4 33 272 0.930232558 1.301029996 0 0.2 0.348837209 35 2 1 40 3R:16649921-16649957 7 Cctgamma FBtr0083337|FBtr0302371|FBtr0083338|FBtr0302370 16649738|16649738|16649738|16649738 16649978|16649978|16649978|16649978 TGCATTT 7mer-m8 dme-miR-277-3p 3R + 16649923 16649958 3'utr Cctgamma FlyBase G32867.1 AAAATTCAAATGCATTTGCTCTCATTAACAGTACAC 23 16649938 0.692324348 5 22 159 0.975609756 1.602059991 0.097560976 0.47826087 0.707317073 23 1 0 40 3R:16649923-16649958 7 27.5 3230 FBgn0015019 3709.713333 222.3133333 340.54 0.007412972 0.123699283 0.080754096 -5 -5 -5 0.1 dme-miR-277-3p 6mer3-8 TGCATT 3R 16989923 16989928 + 3R_16989923_16989928_+ 0.999997997 0.999993018 0.999995507 3.54E-06 MESK4 FBtr0337059|FBtr0083367 16989884|16989884 16990419|16990321 3R + 16989893 16990007 3'utr MESK4 FlyBase G43490.1 TGCCGAAGGAGGGAGGGGTATTCCACTGATTGCATTCTGTCCCATTGTTGGACTATTTTTAACCGTCCGCTGGATTATCAGCGCTGCCCTCGCTGCCCTGCAGTCGTCGATTGCA 26 16989922 0.982296852 13 26 197 1 1.491361694 0.258064516 0.192307692 0.322580645 26 0 0 31 3R:16989893-16990007 6 MESK4 FBtr0083367|FBtr0337059 16989884|16989884 16990321|16990419 TGCATT 6mer3-8 dme-miR-277-3p 3R + 16989896 16990018 3'utr MESK4 FlyBase G32871.1 CGAAGGAGGGAGGGGTATTCCACTGATTGCATTCTGTCCCATTGTTGGACTATTTTTAACCGTCCGCTGGATTATCAGCGCTGCCCTCGCTGCCCTGCAGTCGTCGATTGCACCTACAGTGCT 34 16989926 0.982284608 17 33 254 0.961538462 1.698970004 0.480769231 0.382352941 0.596153846 34 2 0 50 3R:16989896-16990018 6 18.5 3231 FBgn0043069 8.44 0.73 1.12 2.191943128 25.34246575 16.51785714 1 -3 -1 0.1 dme-miR-277-3p 6mer3-8 TGCATT 3R 16994135 16994140 + 3R_16994135_16994140_+ 0.999999939 1 0.999999969 7.07E-08 CG31274 FBtr0083369 16994096 16994532 3R + 16994101 16994219 3'utr CG31274 FlyBase G43495.1 AATATGCCGAAGGAGGGAGGGGTATTCCACTGATTGCATTCTGTCCCATTGTTGGACTATTTTTAACCGTCCGCTGGATTATCAGCGCTGCCCTCGCTGCCCTGCAGTCGTCGATTGCA 32 16994134 0.98470536 15 31 249 0.970588235 1.51851394 0.264705882 0.0625 0.117647059 32 1 0 33 3R:16994101-16994219 6 CG31274 FBtr0083369 16994096 16994532 TGCATT 6mer3-8 dme-miR-277-3p 3R + 16994101 16994159 3'utr CG31274 FlyBase G32875.1 AATATGCCGAAGGAGGGAGGGGTATTCCACTGATTGCATTCTGTCCCATTGTTGGACTA 18 16994134 0.984050713 7 17 131 1 1.397940009 0.2 0.388888889 0.56 18 0 0 25 3R:16994101-16994159 6 18 3232 FBgn0051274 0 0 0 Inf Inf Inf 1 1 1 0.1 dme-miR-8-3p 6mer2-7 AGTATT 3R 16994627 16994632 - 3R_16994627_16994632_- 0.751308871 0.946454243 0.848881557 0.137988565 CG17556 FBtr0083375 16994540 16994810 3R - 16994550 16994681 3'utr CG17556 FlyBase G51890.1 AAAAACAATTTTATAGTCAGTGCATCCAAGCAACTGTTTTTGGTGGTCTAGTATTGTTGACGGCATTGAAACCGGATAATTTAAAACATTTATTATTGAGGTAGGCAAAAATAGTCCTGTAATAAATTTAGA 35 16994641 0.987332024 15 34 293 0.97826087 1.653212514 0.130434783 0.228571429 0.413043478 35 1 0 45 3R:16994550-16994681 6 CG17556 FBtr0083375 16994540 16994810 AGTATT 6mer2-7 dme-miR-8-3p 3R - 16994596 16994655 3'utr CG17556 FlyBase G39189.2 CAAGCAACTGTTTTTGGTGGTCTAGTATTGTTGACGGCATTGAAACCGGATAATTTAAAA 14 16994641 0.985346728 5 12 104 0.888888889 1.204119983 0 0.214285714 0.388888889 14 2 0 16 3R:16994596-16994655 6 16.5 3233 FBgn0038462 431.2066667 43.27333333 66.41 0.038264715 0.381297181 0.248456558 9 9 9 0.1 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 16999384 16999391 + 3R_16999384_16999391_+ 0.385145729 0.376685704 0.380915717 0.005982123 CG3534 FBtr0083370 16999271 16999449 3R + 16999295 16999421 3'utr CG3534 FlyBase G43509.1 CATTCCAGTTTATACTCCGTACATTCACAAACTGATTCCTTCTTAAACGTCTCCTGTAATTGACAGAACTTAAGTGCAATTAACAAATTCTGTGATTGACGATTTATTACAAATTTATGCGAAACCA 89 16999383 0.982934586 17 84 636 0.92920354 1.322219295 0.309734513 0.179775281 0.353982301 89 4 4 105 3R:16999295-16999421 8 CG3534 FBtr0083370 16999271 16999449 CTGTGATT 8mer-m1 dme-miR-308-3p 3R + 16999317 16999409 3'utr CG3534 FlyBase G32883.1 ATTCACAAACTGATTCCTTCTTAAACGTCTCCTGTAATTGACAGAACTTAAGTGCAATTAACAAATTCTGTGATTGACGATTTATTACAAATT 59 16999383 0.761703922 13 56 393 0.957746479 1.832508913 0.225352113 0.169491525 0.309859155 59 3 0 68 3R:16999317-16999409 8 54 3234 FBgn0038463 327.35 20.21 30.99 0.164961051 2.671944582 1.74249758 1 1 1 0.1 dme-miR-92b-3p 7mer-A1 TGCAATA 3R 17087931 17087937 + 3R_17087931_17087937_+ 0.78290227 0.782911752 0.782907011 6.72E-06 GckIII FBtr0083399 17087725 17087988 3R + 17087902 17087951 3'utr GckIII FlyBase G43566.1 AGCATATAATATGTATTCGTTTGTTTATCTGCAATATTAATCTAATGTAA 16 17087929 0.990468693 3 16 189 1 1.230448921 0.058823529 0.0625 0.117647059 16 0 0 17 3R:17087902-17087951 7 GckIII FBtr0083399 17087725 17087988 TGCAATA 7mer-A1 dme-miR-92b-3p 3R + 17087920 17087948 3'utr GckIII FlyBase G32932.1 GTTTGTTTATCTGCAATATTAATCTAATG 5 17087929 0.759707324 2 5 50 1 0.84509804 0.428571429 0.4 0.571428571 5 0 0 7 3R:17087920-17087948 7 10 3235 FBgn0266465 620.1 30.44666667 46.71666667 0.016126431 0.328443179 0.214056368 2 2 2 0.1 dme-miR-184-5p 6mer3-8 TGATAA 3R 17091585 17091590 + 3R_17091585_17091590_+ 0.999998827 0.997292051 0.998645439 0.001913926 cal1 FBtr0083400 17091397 17091938 3R + 17091568 17091614 3'utr cal1 FlyBase G43578.1 AATTACATGATCGATAGTGATAATAGAAAACATAATACGTCATAATC 14 17091582 0.916644137 4 12 83 0.823529412 0.669006781 0.176470588 0.214285714 0.352941176 14 1 2 14 3R:17091568-17091614 6 cal1 FBtr0083400 17091397 17091938 TGATAA 6mer3-8 dme-miR-184-5p 3R + 17091573 17091603 3'utr cal1 FlyBase G32941.1 CATGATCGATAGTGATAATAGAAAACATAAT 12 17091582 0.914274075 3 11 60 0.888888889 0.726998728 0.166666667 0.416666667 0.611111111 12 0 2 16 3R:17091573-17091603 6 13 3236 FBgn0038478 575.3666667 19.37333333 29.76333333 0.022594288 0.671025465 0.436779035 3 3 3 0.1 dme-miR-307a-3p 6mer2-7 GTTGTG 3R 17091704 17091709 + 3R_17091704_17091709_+ 0.999810203 0.564956385 0.782383294 0.307488071 cal1 FBtr0083400 17091397 17091938 3R + 17091691 17091718 3'utr cal1 FlyBase G43579.1 CTTGTGTGTCGAAGTTGTGCTTTAGTTC 8 17091712 0.657554731 3 8 66 1 0.954242509 0.222222222 0.125 0.222222222 8 0 0 9 3R:17091691-17091718 6 cal1 FBtr0083400 17091397 17091938 GTTGTG 6mer2-7 dme-miR-307a-3p 3R + 17091677 17091718 3'utr cal1 FlyBase G32942.1 TTGCAATAGTAATTCTTGTGTGTCGAAGTTGTGCTTTAGTTC 11 17091713 0.98979939 3 10 98 0.8125 1.113943352 0.1875 0.363636364 0.5625 11 3 0 13 3R:17091677-17091718 6 9 3237 FBgn0038478 575.3666667 19.37333333 29.76333333 0.015642199 0.464556091 0.302385485 -8 -9 -8.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 17091795 17091800 - 3R_17091795_17091800_- 0.999956761 0.999875652 0.999916207 5.73E-05 cher FBtr0332167|FBtr0337102|FBtr0089471|FBtr0290013|FBtr0337101|FBtr0337100|FBtr0089473|FBtr0290014|FBtr0290015|FBtr0303364 17091531|17091531|17091531|17091531|17091531|17091531|17091531|17091531|17091531|17091531 17092039|17092039|17092039|17092039|17092039|17092039|17092039|17092039|17092039|17092039 3R - 17091780 17091842 3'utr cher FlyBase G51937.2 AGAAGCTTCTGTTTTTCGACGCGCCATTTTCACTCTTTAAATTGATCTTACGTTTTATTTGTT 25 17091801 0.757886594 6 23 271 0.933333333 1.447158031 0.033333333 0.2 0.333333333 25 2 0 28 3R:17091780-17091842 6 cher FBtr0089473|FBtr0290014|FBtr0290015|FBtr0303364|FBtr0337102|FBtr0332167|FBtr0290013|FBtr0089471|FBtr0337101|FBtr0337100 17091531|17091531|17091531|17091531|17091531|17091531|17091531|17091531|17091531|17091531 17092039|17092039|17092039|17092039|17092039|17092039|17092039|17092039|17092039|17092039 TGATCT 6mer3-8 dme-bantam-3p 3R - 17091789 17091811 3'utr cher FlyBase G39225.1 ACTCTTTAAATTGATCTTACGTT 9 17091801 0.799675567 2 8 81 0.846153846 1.041392685 0 0.333333333 0.538461538 9 2 0 11 3R:17091789-17091811 6 14 3238 FBgn0014141 11202.06 173.88 266.8866667 0.00124977 0.080515298 0.052456723 1 1 1 0.1 dme-miR-7-5p 6mer2-7 TCTTCC 3R 17091840 17091845 + 3R_17091840_17091845_+ 0.998334902 0.999162582 0.998748742 0.000585272 cal1 FBtr0083400 17091397 17091938 3R + 17091822 17091882 3'utr cal1 FlyBase G43580.1 CGTCGAAAAACAGAAGCTTCTTCCTTCCATGTATGTACAAATAACAAAAACTTACCTAAAA 12 17091842 0.982488993 5 11 77 0.928571429 0.812913357 0.142857143 0.166666667 0.285714286 12 0 1 13 3R:17091822-17091882 6 cal1 FBtr0083400 17091397 17091938 TCTTCC 6mer2-7 dme-miR-7-5p 3R + 17091830 17091856 3'utr cal1 FlyBase G32943.1 AACAGAAGCTTCTTCCTTCCATGTATG 6 17091842 0.681129005 2 6 43 1 1 0.3 0.5 0.7 6 0 0 10 3R:17091830-17091856 6 8 3239 FBgn0038478 575.3666667 19.37333333 29.76333333 0.013904177 0.412938747 0.268787098 -2 -2 -2 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 17389770 17389775 + 3R_17389770_17389775_+ 0.996960645 0.685755238 0.841357941 0.220055449 lute FBtr0306209|FBtr0306210|FBtr0083435|FBtr0330037 17388979|17388979|17388979|17389153 17390265|17390265|17390265|17390265 3R + 17389759 17389789 3'utr lute FlyBase G43607.1 ATACACACATCTGATCTGATAATGATAAACT 6 17389769 0.854373975 3 5 37 0.857142857 0.77815125 0.142857143 0.166666667 0.285714286 6 1 0 6 3R:17389759-17389789 6 lute FBtr0306209|FBtr0306210|FBtr0083435|FBtr0330037 17388979|17388979|17388979|17389153 17390265|17390265|17390265|17390265 TGATCT 6mer3-8 dme-bantam-3p 3R + 17389723 17389801 3'utr lute FlyBase G32960.1 ATACCAAACATATTTTTGCCAGCATATACCTAACATATACACACATCTGATCTGATAATGATAAACTATAGTCCTAAAC 9 17389769 0.984205745 7 8 63 0.9 0.653212514 0.3 0.111111111 0.2 9 0 1 9 3R:17389723-17389801 6 6.5 3240 FBgn0262871 490.37 16.86 25.93333333 0.013255297 0.385527877 0.250642674 1 1 1 0.1 dme-miR-12-5p 6mer2-7 ATACTC 3R 17395270 17395275 - 3R_17395270_17395275_- 0.999965215 0.999960813 0.999963014 3.11E-06 Sur-8 FBtr0083447|FBtr0339531|FBtr0083448 17395197|17395197|17395197 17397335|17397176|17397335 3R - 17395253 17395298 3'utr Sur-8 FlyBase G51982.1 AGATGATTAAGTCAAGCATAATGATACTCCTAAAAACAAAAATCAT 56 17395277 0.948712545 4 51 254 0.931506849 1.531478917 0.109589041 0.214285714 0.397260274 56 4 1 68 3R:17395253-17395298 6 Sur-8 FBtr0083448|FBtr0339531|FBtr0083447 17395197|17395197|17395197 17397335|17397176|17397335 ATACTC 6mer2-7 dme-miR-12-5p 3R - 17395258 17395292 3'utr Sur-8 FlyBase G39249.1 TTAAGTCAAGCATAATGATACTCCTAAAAACAAAA 42 17395277 0.734667913 4 38 194 0.929577465 1.819543936 0.098591549 0.476190476 0.690140845 42 5 0 66 3R:17395258-17395292 6 48.5 3241 FBgn0038504 2699.363333 76.09666667 116.9633333 0.0179672 0.637347234 0.414659865 2 2 2 0.1 dme-miR-986-5p 6mer2-7 TTCGAG 3R 17395375 17395380 - 3R_17395375_17395380_- 0.999900672 0.999859663 0.999880168 2.90E-05 Sur-8 FBtr0083447|FBtr0339531|FBtr0083448 17395197|17395197|17395197 17397335|17397176|17397335 3R - 17395357 17395396 3'utr Sur-8 FlyBase G51983.1 CAGAGTTTGGCGAAATTTCGAGCCAATCGCAAATAGAAAC 11 17395381 0.954881325 2 10 56 0.928571429 1.113943352 0.357142857 0.272727273 0.428571429 11 1 0 13 3R:17395357-17395396 6 Sur-8 FBtr0083448|FBtr0339531|FBtr0083447 17395197|17395197|17395197 17397335|17397176|17397335 TTCGAG 6mer2-7 dme-miR-986-5p 3R - 17395367 17395390 3'utr Sur-8 FlyBase G39250.1 TTGGCGAAATTTCGAGCCAATCGC 5 17395381 0.735861256 2 5 25 1 0.903089987 0 0.4 0.625 5 0 0 8 3R:17395367-17395390 6 8 3242 FBgn0038504 2699.363333 76.09666667 116.9633333 0.002963662 0.105129441 0.068397503 1 1 1 0.1 dme-miR-8-3p 7mer-A1 AGTATTA 3R 17396518 17396524 - 3R_17396518_17396524_- 0.822953838 0.823347175 0.823150506 0.000278176 Sur-8 FBtr0083447|FBtr0339531|FBtr0083448 17395197|17395197|17395197 17397335|17397176|17397335 3R - 17396490 17396566 3'utr Sur-8 FlyBase G51988.1 GTAGTCGTATTTTGTAAAAGCAAGCGCATAAAAGAAGCAACAAGTATTAAACTGCGTGTAATTTGTTTAAATAAGAA 9 17396538 0.999708046 5 9 42 1 1.041392685 0.090909091 0.222222222 0.363636364 9 0 0 11 3R:17396490-17396566 7 Sur-8 FBtr0083448|FBtr0339531|FBtr0083447 17395197|17395197|17395197 17397335|17397176|17397335 AGTATTA 7mer-A1 dme-miR-8-3p 3R - 17396509 17396549 3'utr Sur-8 FlyBase G39254.1 AAGCAAGCGCATAAAAGAAGCAACAAGTATTAAACTGCGTG 7 17396514 0.999381543 2 6 17 1 1 0 0.5 0.7 6 0 0 10 3R:17396509-17396549 7 3 3243 FBgn0038504 2699.363333 76.09666667 116.9633333 0.001111373 0.03942354 0.025649064 14 -10 2 0.1 dme-miR-980-5p 6mer3-8 GAAAAA 3R 17396625 17396630 - 3R_17396625_17396630_- 0.998851797 0.99961901 0.999235403 0.000542492 Sur-8 FBtr0083447|FBtr0339531|FBtr0083448 17395197|17395197|17395197 17397335|17397176|17397335 3R - 17396627 17396659 3'utr Sur-8 FlyBase G51989.1 AAAAAAACGCAAGCGCCAAGGAATTGTTTGAAA 18 17396633 0.97268292 4 12 70 0.666666667 1.146128036 0.142857143 0.166666667 0.285714286 18 7 0 14 3R:17396627-17396659 3 Sur-8 FBtr0083448|FBtr0339531|FBtr0083447 17395197|17395197|17395197 17397335|17397176|17397335 GAAAAA 6mer3-8 dme-miR-980-5p 3R - 17396576 17396654 3'utr Sur-8 FlyBase G39255.1 AACGCAAGCGCCAAGGAATTGTTTGAAAAAATTTAAAACTAAAAACAAAAAGTGGTTAAGAAATTATTAATCTGTATAC 14 17396632 0.951801818 6 13 57 0.888888889 1.204119983 0.111111111 0.214285714 0.388888889 14 2 0 16 3R:17396576-17396654 6 13.5 3244 FBgn0038504 2699.363333 76.09666667 116.9633333 0.005001179 0.177405931 0.115420787 3 2 2.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3R 17396769 17396775 - 3R_17396769_17396775_- 0.81506726 0.813669791 0.814368525 0.000988182 Sur-8 FBtr0083447|FBtr0339531|FBtr0083448|FBtr0339532 17395197|17395197|17395197|17396664 17397335|17397176|17397335|17397335 3R - 17396714 17396818 3'utr Sur-8 FlyBase G51990.2 CAGAGTCCGCACTTTAGGTTTTAATTTAACTCATGCTTCCAAGCTAGTCAAAAATGTAACACGCGAAACGAATCGAAAGTAAATTGAAAGCTTTAAATCTTCTGT 35 17396783 0.977127394 8 31 215 0.891304348 1.311753861 0.282608696 0.228571429 0.413043478 35 4 1 41 3R:17396714-17396818 7 Sur-8 FBtr0339532|FBtr0083448|FBtr0339531|FBtr0083447 17396664|17395197|17395197|17395197 17397335|17397335|17397176|17397335 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R - 17396759 17396796 3'utr Sur-8 FlyBase G39256.1 AATTTAACTCATGCTTCCAAGCTAGTCAAAAATGTAAC 15 17396782 0.694486652 5 12 83 0.833333333 1.176091259 0.166666667 0.2 0.333333333 15 3 0 15 3R:17396759-17396796 7 17 3245 FBgn0038504 2699.363333 76.09666667 116.9633333 0.006297781 0.223400061 0.145344695 8 7 7.5 0.1 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 17396895 17396902 - 3R_17396895_17396902_- 0.625361175 0.625361852 0.625361513 4.95E-07 Sur-8 FBtr0083447|FBtr0339531|FBtr0083448|FBtr0339532 17395197|17395197|17395197|17396664 17397335|17397176|17397335|17397335 3R - 17396824 17396999 3'utr Sur-8 FlyBase G51991.1 TGATATCAGCTACTTTCCCCAAAGCGATTCTAATTGCTTAACCTTCTACTTAGGCTTACTCCCTTAAACCGACTGGAGTGCGTTGGCTGACAAACGATAGCTTTAAAACGTTATACCAATGTCCCGCGTATTGTAAACTGCCCCGATTTGCTTTTTATTCTTTCTGTGTTCAATCA 82 17396902 0.939516592 26 80 537 0.988636364 1.638489257 0.284090909 0.048780488 0.113636364 82 0 1 87 3R:17396824-17396999 8 Sur-8 FBtr0339532|FBtr0083448|FBtr0339531|FBtr0083447 17396664|17395197|17395197|17395197 17397335|17397335|17397176|17397335 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R - 17396837 17396949 3'utr Sur-8 FlyBase G39257.1 TAGGCTTACTCCCTTAAACCGACTGGAGTGCGTTGGCTGACAAACGATAGCTTTAAAACGTTATACCAATGTCCCGCGTATTGTAAACTGCCCCGATTTGCTTTTTATTCTTT 68 17396902 0.926844242 18 63 395 0.947916667 1.260071388 0.427083333 0.352941176 0.541666667 68 1 4 91 3R:17396837-17396949 8 46.5 3246 FBgn0038504 2699.363333 76.09666667 116.9633333 0.017226284 0.611064874 0.397560489 0 0 0 0.1 dme-miR-184-3p 6mer2-7 CCGTCC 3R 17397142 17397147 - 3R_17397142_17397147_- 0.999814638 0.88483316 0.942323899 0.081304128 Sur-8 FBtr0083447|FBtr0339531|FBtr0083448|FBtr0339532 17395197|17395197|17395197|17396664 17397335|17397176|17397335|17397335 3R - 17397038 17397194 stop_codon Sur-8 FlyBase G51992.1 AGCAGCGACCGTCGCTAACGGTGCGATCTCAGCTAACGGGCAAGATCCCGTCCCCATCCTTTATACCATTCATTAAGGGAGAAAGCCATGATAGATAGGTGTTTTAGTTGAAATCGTTCTAAAGCGGTATAAGCTTGATAAAGATTCTAGTTTTTTT 75 17397149 0.973724553 17 70 371 0.926315789 1.245512668 0.084210526 0.213333333 0.378947368 75 3 4 88 3R:17397038-17397194 6 Sur-8 FBtr0339532|FBtr0083448|FBtr0339531|FBtr0083447 17396664|17395197|17395197|17395197 17397335|17397335|17397176|17397335 CCGTCC 6mer2-7 dme-miR-184-3p 3R - 17397094 17397199 stop_codon Sur-8 FlyBase G39259.1 CCAGAAGCAGCGACCGTCGCTAACGGTGCGATCTCAGCTAACGGGCAAGATCCCGTCCCCATCCTTTATACCATTCATTAAGGGAGAAAGCCATGATAGATAGGTG 46 17397149 0.940518818 13 38 156 0.847222222 1.484299839 0.166666667 0.456521739 0.652777778 46 10 1 61 3R:17397094-17397199 6 23 3247 FBgn0038504 2699.363333 76.09666667 116.9633333 0.008520528 0.302247142 0.196642823 2 2 2 0.1 "dme-miR-995-3p,dme-miR-998-3p" 6mer2-7 GGTGCT 3R 17397246 17397251 - 3R_17397246_17397251_- 0.99798633 0.999986299 0.998986315 0.001414214 Sur-8 FBtr0083447|FBtr0083448|FBtr0339532 17395197|17395197|17396664 17397335|17397335|17397335 3R - 17397203 17397277 3'utr Sur-8 FlyBase G51993.1 AGCTGCAGACGGTGAACCAGGCGCCCGGTGCTGGTGGCAACGGTGGTGGAGGAGCAGCGGCAGCAGGAGGATCCG 10 17397249 0.93622051 3 10 31 1 1.079181246 0.25 0.2 0.333333333 10 0 0 12 3R:17397203-17397277 6 Sur-8 FBtr0339532|FBtr0083448|FBtr0083447 17396664|17395197|17395197 17397335|17397335|17397335 GGTGCT 6mer2-7 "dme-miR-995-3p,dme-miR-998-3p" 3R - 17397226 17397258 3'utr Sur-8 FlyBase G39260.1 GGCGCCCGGTGCTGGTGGCAACGGTGGTGGAGG 9 17397249 0.93987847 2 8 28 0.909090909 0.698970004 0.454545455 0.222222222 0.363636364 9 0 1 10 3R:17397226-17397258 6 8.5 3248 FBgn0038504 2699.363333 76.09666667 116.9633333 0.003148891 0.111700031 0.072672347 -2 -2 -2 0.1 dme-miR-1007-3p 6mer3-8 TGAGCT 3R 17532337 17532342 - 3R_17532337_17532342_- 0.999964381 0.999958152 0.999961266 4.38E-06 CG5823 FBtr0083505|FBtr0321266 17532323|17532323 17532719|17532719 3R - 17532321 17532357 3'utr CG5823 FlyBase G52005.1 AAGCCCGGCAACATATGAGCTCGTGTACAAATTAACC 11 17532342 0.948921814 4 10 49 0.933333333 1.146128036 0.2 0.272727273 0.466666667 11 1 0 14 3R:17532321-17532357 6 CG5823 FBtr0083505|FBtr0321266 17532323|17532323 17532719|17532719 TGAGCT 6mer3-8 dme-miR-1007-3p 3R - 17532320 17532403 3'utr CG5823 FlyBase G39270.1 AATGCAACGTGAATAATGCCAGAAATATGTTTGTAAATGAATAAAGAAGCCCGGCAACATATGAGCTCGTGTACAAATTAACCA 24 17532342 0.88281547 5 22 95 0.864864865 1.505149978 0.189189189 0.291666667 0.540540541 24 5 0 32 3R:17532320-17532403 6 12 3249 FBgn0038515 447.3266667 29.51666667 45.11666667 0.026826033 0.406549972 0.265977096 0 0 0 0.1 dme-bantam-3p 7mer-m8 TGATCTC 3R 17544044 17544050 + 3R_17544044_17544050_+ 0.661590081 0.661589441 0.661589761 4.95E-07 SF1 FBtr0331707 17543545 17545148 3R + 17544016 17544084 3'utr SF1 FlyBase G43624.1 AGGGTATCGAAGTGCCCGAGGGCCATAATGATCTCCGCAGAATGCAGTTGCGAGAACTGGCTCAGCTGA 119 17544044 0.730581036 6 115 399 0.965986395 1.45331834 0.401360544 0.201680672 0.353741497 119 1 4 142 3R:17544016-17544084 7 SF1 FBtr0331707 17543545 17545148 TGATCTC 7mer-m8 dme-bantam-3p 3R + 17544016 17544063 3'utr SF1 FlyBase G32972.1 AGGGTATCGAAGTGCCCGAGGGCCATAATGATCTCCGCAGAATGCAGT 60 17544044 0.697515398 2 58 201 0.977272727 1.934498451 0.431818182 0.35 0.556818182 60 2 0 86 3R:17544016-17544063 7 84.5 3250 FBgn0025571 727 34.72 53.27 0.116231087 2.43375576 1.586258682 0 0 0 0.1 dme-miR-980-3p 6mer3-8 GGCAGC 3R 17544575 17544580 + 3R_17544575_17544580_+ 0.999999996 0.99999412 0.999997058 4.17E-06 SF1 FBtr0331707 17543545 17545148 3R + 17544534 17544594 3'utr SF1 FlyBase G43627.1 ATGGAGCACGGTATGGGATTGGACCAGCACGGTCACGGTTTGGCAGCGATGGATCACGGCA 11 17544574 0.95117855 4 10 44 1 1.079181246 0.333333333 0.090909091 0.166666667 11 0 0 12 3R:17544534-17544594 6 SF1 FBtr0331707 17543545 17545148 GGCAGC 6mer3-8 dme-miR-980-3p 3R + 17544551 17544607 3'utr SF1 FlyBase G32974.1 ATTGGACCAGCACGGTCACGGTTTGGCAGCGATGGATCACGGCATGAGCCTTGGCAT 7 17544574 0.956565382 3 7 33 1 1.041392685 0.181818182 0.428571429 0.636363636 7 0 0 11 3R:17544551-17544607 6 6.5 3251 FBgn0025571 727 34.72 53.27 0.008940853 0.187211982 0.122019899 1 1 1 0.1 dme-miR-980-5p 6mer3-8 GAAAAA 3R 17673893 17673898 - 3R_17673893_17673898_- 0.999999559 1 0.99999978 2.83E-07 alt FBtr0335026|FBtr0335027 17673730|17673730 17674823|17674823 3R - 17673853 17673928 3'utr alt FlyBase G52043.1 ATTGTCGGAACCTGTTGCATGCGACATACTGAAAAATTAGGAAAACCAACAAATTCAAGCCCATCAGCAACCACAA 9 17673909 0.920816002 6 9 29 1 1.041392685 0.090909091 0.111111111 0.272727273 9 0 0 11 3R:17673853-17673928 6 alt FBtr0335027|FBtr0335026 17673730|17673730 17674823|17674823 GAAAAA 6mer3-8 dme-miR-980-5p 3R - 17673872 17673924 3'utr alt FlyBase G39298.1 TCGGAACCTGTTGCATGCGACATACTGAAAAATTAGGAAAACCAACAAATTCA 6 17673892 0.950685687 4 5 26 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3R:17673872-17673924 6 4 3252 FBgn0038535 6868.54 219.92 337.8266667 0.000582365 0.018188432 0.011840392 11 -6 2.5 0.1 dme-miR-980-3p 6mer3-8 GGCAGC 3R 17674044 17674049 - 3R_17674044_17674049_- 0.999885679 0.999885811 0.999885745 7.07E-08 alt FBtr0335026|FBtr0335027 17673730|17673730 17674823|17674823 3R - 17674023 17674068 3'utr alt FlyBase G52045.1 AATCCCAGGAAGAGCAAATGGCAGCAGCAACATTTAATTAAGCGTA 64 17674050 0.917603596 2 60 34 0.9625 1.58546073 0.1 0.203125 0.3625 64 2 1 77 3R:17674023-17674068 6 alt FBtr0335027|FBtr0335026 17673730|17673730 17674823|17674823 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 17674030 17674068 3'utr alt FlyBase G39299.1 AATCCCAGGAAGAGCAAATGGCAGCAGCAACATTTAATT 45 17674050 0.999590906 2 45 18 1 1.880813592 0.184210526 0.488888889 0.697368421 45 0 0 76 3R:17674030-17674068 6 53 3253 FBgn0038535 6868.54 219.92 337.8266667 0.007716341 0.240996726 0.156885188 1 1 1 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 17674291 17674298 - 3R_17674291_17674298_- 0.62504746 0.625346084 0.625196772 0.000211142 alt FBtr0089412|FBtr0089413|FBtr0335026|FBtr0089415|FBtr0089414|FBtr0089417|FBtr0335027|FBtr0089416 17674184|17674184|17673730|17674184|17674184|17674184|17673730|17674184 17674823|17674823|17674823|17674823|17674823|17674823|17674823|17674823 3R - 17674219 17674343 3'utr alt FlyBase G52047.1 ATTTAACACATACTTTGCATGCGATTATTATTTTTGTGTTACACTTGCATTTAAAAACGCGCTTTAAACAATTGTATATGTATCTTATGTTAAGCAAATGAATTTAAAACCCAGCTACTTAAAAT 39 17674299 0.983518202 13 39 299 1 1.681241237 0.520833333 0.179487179 0.333333333 39 0 0 48 3R:17674219-17674343 8 alt FBtr0335027|FBtr0089416|FBtr0089414|FBtr0089417|FBtr0335026|FBtr0089415|FBtr0089412|FBtr0089413 17673730|17674184|17674184|17674184|17673730|17674184|17674184|17674184 17674823|17674823|17674823|17674823|17674823|17674823|17674823|17674823 TGCATTTA 8mer-A1 dme-miR-277-3p 3R - 17674234 17674310 3'utr alt FlyBase G39301.1 TTGTGTTACACTTGCATTTAAAAACGCGCTTTAAACAATTGTATATGTATCTTATGTTAAGCAAATGAATTTAAAAC 25 17674299 0.985353548 8 24 184 0.971428571 1.531478917 0.571428571 0.32 0.514285714 25 1 0 34 3R:17674234-17674310 8 24 3254 FBgn0038535 6868.54 219.92 337.8266667 0.003494192 0.109130593 0.071042349 1 1 1 0.1 dme-miR-2b-2-5p 7mer-A1 TGAAGAA 3R 17674567 17674573 - 3R_17674567_17674573_- 0.822954029 0.823247386 0.823100708 0.000207465 alt FBtr0089412|FBtr0089413|FBtr0335026|FBtr0089415|FBtr0089414|FBtr0089417|FBtr0335027|FBtr0089416 17674184|17674184|17673730|17674184|17674184|17674184|17673730|17674184 17674823|17674823|17674823|17674823|17674823|17674823|17674823|17674823 3R - 17674553 17674601 3'utr alt FlyBase G52051.1 TAGTAGCGAGAACCAACAATTATGAGAATGAAGAACTATGGAACGCTTT 35 17674563 0.676865933 5 34 151 0.975609756 1.602059991 0.12195122 0.142857143 0.268292683 35 1 0 40 3R:17674553-17674601 7 alt FBtr0335027|FBtr0089416|FBtr0089414|FBtr0089417|FBtr0335026|FBtr0089415|FBtr0089412|FBtr0089413 17673730|17674184|17674184|17674184|17673730|17674184|17674184|17674184 17674823|17674823|17674823|17674823|17674823|17674823|17674823|17674823 TGAAGAA 7mer-A1 dme-miR-2b-2-5p 3R - 17674552 17674597 3'utr alt FlyBase G39302.1 AGCGAGAACCAACAATTATGAGAATGAAGAACTATGGAACGCTTTA 21 17674578 0.950765909 5 19 86 0.967741935 1.477121255 0.161290323 0.285714286 0.516129032 21 1 0 30 3R:17674552-17674597 7 27 3255 FBgn0038535 6868.54 219.92 337.8266667 0.003930966 0.122771917 0.079922643 -10 5 -2.5 0.1 dme-miR-999-3p 6mer2-7 GTTAAC 3R 17688456 17688461 - 3R_17688456_17688461_- 0.73397496 0.976814683 0.855394822 0.171713599 osa FBtr0089582|FBtr0089581|FBtr0335025|FBtr0301487|FBtr0089583|FBtr0335024 17687816|17687816|17687816|17687816|17687816|17687816 17689817|17689817|17689817|17689817|17689817|17689817 3R - 17688369 17688492 3'utr osa FlyBase G52075.1 AAAAAATGAAACCCTAATGCTGTAATCTTATGTTAACTGTATTATTTGCTGGAAGTGCTGCTGCTTCGTTTTATTTTATATCGAACTTACTTAAGGCGTAAATGACAAGATAAATAATTAGGTT 45 17688475 0.978230577 17 43 376 0.924242424 1.785329835 0.242424242 0.311111111 0.53030303 45 5 0 61 3R:17688369-17688492 6 osa FBtr0089583|FBtr0335024|FBtr0335025|FBtr0301487|FBtr0089582|FBtr0089581 17687816|17687816|17687816|17687816|17687816|17687816 17689817|17689817|17689817|17689817|17689817|17689817 GTTAAC 6mer2-7 dme-miR-999-3p 3R - 17688425 17688489 3'utr osa FlyBase G39320.2 AAATGAAACCCTAATGCTGTAATCTTATGTTAACTGTATTATTTGCTGGAAGTGCTGCTGCTTCG 31 17688475 0.687210709 12 28 274 0.930232558 1.301029996 0.139534884 0.322580645 0.511627907 31 2 1 40 3R:17688425-17688489 6 19 3256 FBgn0261885 4320.86 50.56333333 77.47333333 0.004397273 0.375766366 0.245245676 14 14 14 0.1 dme-miR-283-5p 6mer3-8 TGATAT 3R 17688554 17688559 - 3R_17688554_17688559_- 0.946465844 0.953764849 0.950115347 0.005161172 osa FBtr0089582|FBtr0089581|FBtr0335025|FBtr0301487|FBtr0089583|FBtr0335024 17687816|17687816|17687816|17687816|17687816|17687816 17689817|17689817|17689817|17689817|17689817|17689817 3R - 17688508 17688615 3'utr osa FlyBase G52076.1 AATGAAAAACCCTCAGATGAAGGCAAGCAAACAATTTAAATTGAAATCAAATTAGGTGATATAATATATAAAAATACATAACATATACATACATAATTAATATAAACG 280 17688564 0.977399334 14 268 2131 0.956790123 2.491361694 0.216049383 0.128571429 0.24691358 280 14 0 310 3R:17688508-17688615 6 osa FBtr0089583|FBtr0335024|FBtr0335025|FBtr0301487|FBtr0089582|FBtr0089581 17687816|17687816|17687816|17687816|17687816|17687816 17689817|17689817|17689817|17689817|17689817|17689817 TGATAT 6mer3-8 dme-miR-283-5p 3R - 17688490 17688611 3'utr osa FlyBase G39321.1 AAAAACCCTCAGATGAAGGCAAGCAAACAATTTAAATTGAAATCAAATTAGGTGATATAATATATAAAAATACATAACATATACATACATAATTAATATAAACGAAACATGAAAAATCGAAA 175 17688564 0.983311896 14 170 1309 0.980916031 2.108903128 0.187022901 0.382857143 0.58778626 175 4 1 257 3R:17688490-17688611 6 216 3257 FBgn0261885 4320.86 50.56333333 77.47333333 0.049990048 4.271870262 2.788056105 5 5 5 0.1 dme-miR-305-3p 6mer3-8 ATGTGC 3R 17688989 17688994 - 3R_17688989_17688994_- 0.999988612 0.999990487 0.999989549 1.34E-06 osa FBtr0089582|FBtr0089581|FBtr0335025|FBtr0301487|FBtr0089583|FBtr0335024 17687816|17687816|17687816|17687816|17687816|17687816 17689817|17689817|17689817|17689817|17689817|17689817 3R - 17688952 17689044 3'utr osa FlyBase G52079.1 GAGGATAGTTTTTAAATTCTACCACTTACTAATACCTACATATTACCACAATGTGCAGCATAGGAACTCATAAACTGATCGAACTGAACGAAC 131 17688993 0.949704923 11 129 625 0.980769231 1.707570176 0.038461538 0.167938931 0.301282051 131 1 2 153 3R:17688952-17689044 6 osa FBtr0089583|FBtr0335024|FBtr0335025|FBtr0301487|FBtr0089582|FBtr0089581 17687816|17687816|17687816|17687816|17687816|17687816 17689817|17689817|17689817|17689817|17689817|17689817 ATGTGC 6mer3-8 dme-miR-305-3p 3R - 17688952 17689014 3'utr osa FlyBase G39324.1 AATACCTACATATTACCACAATGTGCAGCATAGGAACTCATAAACTGATCGAACTGAACGAAC 84 17688992 0.811985864 7 81 385 0.971631206 2.136720567 0 0.416666667 0.65248227 84 4 0 137 3R:17688952-17689014 6 92 3258 FBgn0261885 4320.86 50.56333333 77.47333333 0.021292058 1.819500297 1.187505378 -1 -2 -1.5 0.1 dme-miR-305-3p 6mer3-8 ATGTGC 3R 17689613 17689618 - 3R_17689613_17689618_- 0.999952367 0.999543201 0.999747784 0.000289348 osa FBtr0089582|FBtr0089581|FBtr0335025|FBtr0301487|FBtr0089583|FBtr0335024 17687816|17687816|17687816|17687816|17687816|17687816 17689817|17689817|17689817|17689817|17689817|17689817 3R - 17689516 17689764 3'utr osa FlyBase G52082.3 AGTCGACTAAGCTGGCGTTCGGTGGTTGAACAGCGGGCCCAGGAGCAACTCCGAAGTGCAAGACCAGAAGATGATACCTGCATCCATGTGGGGTGGGCATGTAAATTTACTTAAGTATGGCGCCAAGAGAGAGAGAGAGAGTCACGATGTGCGAGAACTCGTGTCCGAACTCTAAGGATACGTAAACGGGAACTCAGCAGGTGCAGCGCCTGCAATGTATCTGCGATGGAATGGCTCGCCAATCCATCA 185 17689617 0.900458749 25 182 785 0.981220657 2.320146286 0.356807512 0.118918919 0.234741784 185 4 0 209 3R:17689516-17689764 6 osa FBtr0089583|FBtr0335024|FBtr0335025|FBtr0301487|FBtr0089582|FBtr0089581 17687816|17687816|17687816|17687816|17687816|17687816 17689817|17689817|17689817|17689817|17689817|17689817 ATGTGC 6mer3-8 dme-miR-305-3p 3R - 17689516 17689755 3'utr osa FlyBase G39328.1 AGCTGGCGTTCGGTGGTTGAACAGCGGGCCCAGGAGCAACTCCGAAGTGCAAGACCAGAAGATGATACCTGCATCCATGTGGGGTGGGCATGTAAATTTACTTAAGTATGGCGCCAAGAGAGAGAGAGAGAGTCACGATGTGCGAGAACTCGTGTCCGAACTCTAAGGATACGTAAACGGGAACTCAGCAGGTGCAGCGCCTGCAATGTATCTGCGATGGAATGGCTCGCCAATCCATCA 105 17689617 0.901254192 23 95 433 0.886227545 1.216019206 0.449101796 0.457142857 0.658682635 105 11 8 148 3R:17689516-17689755 6 72 3259 FBgn0261885 4320.86 50.56333333 77.47333333 0.016663349 1.423956754 0.929352035 -1 -1 -1 0.1 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 17803390 17803397 - 3R_17803390_17803397_- 0.385519587 0.385496014 0.385507801 1.67E-05 CG17802 FBtr0083526 17803223 17803529 3R - 17803344 17803417 3'utr CG17802 FlyBase G52142.1 AAATATCATAAGATATCTGACTGTGATTTGGGTGTATCGATCAGTTTTGAAAGTGGATCTTTCATCCTCTTAAA 84 17803390 0.986174666 7 82 696 0.980392157 1.698970004 0.401960784 0.214285714 0.352941176 84 1 1 100 3R:17803344-17803417 8 CG17802 FBtr0083526 17803223 17803529 CTGTGATT 8mer-m1 dme-miR-308-3p 3R - 17803375 17803417 3'utr CG17802 FlyBase G39369.1 AAATATCATAAGATATCTGACTGTGATTTGGGTGTATCGATCA 73 17803390 0.700876462 5 70 602 0.955752212 2.033423755 0.442477876 0.397260274 0.610619469 73 5 0 108 3R:17803375-17803417 8 78 3260 FBgn0038549 243.33 17.45666667 26.79 0.320552336 4.468206989 2.911534155 -7 -7 -7 0.1 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3R 17809569 17809574 - 3R_17809569_17809574_- 0.990534155 0.996101286 0.993317721 0.003936534 CG18012 FBtr0332430 17809399 17810834 3R - 17809485 17809648 stop_codon CG18012 FlyBase G52153.1 TTCCAGGAGCTGCGATGGCGGGAGAGTTGGCGCCTGATCGCGGCCCCCGTACTGGAGGCATTTCTATAGAGCATTTTGACAAAGATTTGACAATTACACGTTATGAGAGACTTCCTTTGATTGCTAATCGCTTTTTCTAGGCTAGTTACTACAAATTCTGTACA 66 17809574 0.984063547 24 62 489 0.93902439 1.58546073 0.134146341 0.181818182 0.341463415 66 4 1 77 3R:17809485-17809648 6 CG18012 FBtr0332430 17809399 17810834 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3R - 17809461 17809621 stop_codon CG18012 FlyBase G39378.1 TGGCGCCTGATCGCGGCCCCCGTACTGGAGGCATTTCTATAGAGCATTTTGACAAAGATTTGACAATTACACGTTATGAGAGACTTCCTTTGATTGCTAATCGCTTTTTCTAGGCTAGTTACTACAAATTCTGTACACAAAAGAGCTTCAAACTTGCTTAT 59 17809574 0.964719723 25 56 422 0.965116279 1.919078092 0.127906977 0.372881356 0.569767442 59 3 0 83 3R:17809461-17809621 6 33 3261 FBgn0038552 964.0066667 73.48333333 112.6866667 0.034232128 0.449081424 0.292847424 0 0 0 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 17809699 17809705 - 3R_17809699_17809705_- 0.823349326 0.823349482 0.823349404 1.41E-07 CG18012 FBtr0332430 17809399 17810834 3R - 17809681 17809745 3'utr CG18012 FlyBase G52154.1 TCAGCTGGCCGAGCAGCTGAGGATTTGGTTCGAAAATTTTCCAAAGAATCCCAGCATCCTGGAGA 19 17809707 0.8401087 7 19 94 1 1.322219295 0.238095238 0.105263158 0.19047619 19 0 0 21 3R:17809681-17809745 7 CG18012 FBtr0332430 17809399 17810834 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 17809681 17809721 3'utr CG18012 FlyBase G39379.1 TTGGTTCGAAAATTTTCCAAAGAATCCCAGCATCCTGGAGA 11 17809708 0.678133153 3 9 60 0.75 1.079181246 0.125 0.363636364 0.5625 11 4 0 12 3R:17809681-17809721 7 13 3262 FBgn0038552 964.0066667 73.48333333 112.6866667 0.013485384 0.176910864 0.115364137 2 3 2.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 3R 17810339 17810346 - 3R_17810339_17810346_- 0.66485421 0.666943241 0.665898725 0.001477146 CG18012 FBtr0332430 17809399 17810834 3R - 17810220 17810409 5'utr CG18012 FlyBase G52158.1 AGTTCTGTATGATCGTGCGCCCGCGCAATTCCATCCCATCGACTTGACTCACAAGCACGAGCTGTACCTGAAGCTGGCCAAAGACTACCCACAGTTCCAGGCCAAGGACGCCGAACAATCCGATGTTCTGGAGGCCACCGCTCTTACCCAAAAGCTGGCCAGCGGTGTTGTGCAGTACAGACCACAGCGA 742 17810347 0.934530663 17 734 2772 0.989784336 2.639486489 0.114642452 0.150943396 0.284903519 742 8 1 872 3R:17810220-17810409 8 CG18012 FBtr0332430 17809399 17810834 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R - 17810268 17810405 5'utr CG18012 FlyBase G39381.1 CTGTATGATCGTGCGCCCGCGCAATTCCATCCCATCGACTTGACTCACAAGCACGAGCTGTACCTGAAGCTGGCCAAAGACTACCCACAGTTCCAGGCCAAGGACGCCGAACAATCCGATGTTCTGGAGGCCACCGCT 377 17810347 0.92399419 14 366 1278 0.976311337 2.460145817 0.116751269 0.395225464 0.614213198 377 13 1 577 3R:17810268-17810405 8 416 3263 FBgn0038552 964.0066667 73.48333333 112.6866667 0.431532285 5.661147653 3.691652369 1 1 1 0.1 dme-miR-184-3p 6mer2-7 CCGTCC 3R 17810744 17810749 - 3R_17810744_17810749_- 0.999995933 0.999993117 0.999994525 1.98E-06 CG18012 FBtr0332430 17809399 17810834 3R - 17810708 17810799 5'utr CG18012 FlyBase G52161.1 AAGGCCTTTTGGCAGACGCTCAGTCTGCTGATGGCTCTCATCTCCATTGGCCGTCCCAGCTTCCTACTCGTCCAGAATCCGCCCGGCATTCC 63 17810752 0.97856051 10 60 427 0.961038961 1.86923172 0.025974026 0.174603175 0.324675325 63 3 0 74 3R:17810708-17810799 6 CG18012 FBtr0332430 17809399 17810834 CCGTCC 6mer2-7 dme-miR-184-3p 3R - 17810711 17810860 intron-5'utr CG18012 FlyBase G39382.1 AATCCACGAGCTAACTGCCGTCCCAGTGACGAACCTAACACCCAAACTGCGCCTGCTCTTCAAGGCCTTTTGGCAGACGCTCAGTCTGCTGATGGCTCTCATCTCCATTGGCCGTCCCAGCTTCCTACTCGTCCAGAATCCGCCCGGCAT 57 17810753 0.975184987 13 55 344 0.961038961 1.568201724 0.090909091 0.263157895 0.454545455 57 2 1 74 3R:17810711-17810860 6 43 3264 FBgn0038552 964.0066667 73.48333333 112.6866667 0.044605501 0.585166704 0.381589067 3 4 3.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3R 18023353 18023359 + 3R_18023353_18023359_+ 0.66093592 0.65984671 0.660391315 0.000770181 CG7785 FBtr0083539 18022826 18023689 3R + 18023291 18023399 3'utr CG7785 FlyBase G43676.1 TAGTCGTAAAATGCACTGTTCTGTTCTCATTTAGACATCAGGTGTATAAACTTTGTAAACTCTCTAGTCCTTGCACTATCCAAACCGAAAGTATTTGTATAATTTTATT 71 18023361 0.828377223 10 67 581 0.914893617 0.980255942 0.234042553 0.253521127 0.436170213 71 0 8 86 3R:18023291-18023399 7 CG7785 FBtr0083539 18022826 18023689 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 18023302 18023390 3'utr CG7785 FlyBase G33014.1 TGCACTGTTCTGTTCTCATTTAGACATCAGGTGTATAAACTTTGTAAACTCTCTAGTCCTTGCACTATCCAAACCGAAAGTATTTGTAT 36 18023361 0.984854319 9 34 273 0.9375 1.051152522 0.291666667 0.25 0.4375 36 0 3 45 3R:18023302-18023390 7 45.5 3265 FBgn0038564 104 7.253333333 11.1 0.4375 6.272977941 4.099099099 -8 -8 -8 0.1 dme-miR-14-3p 6mer3-8 AAGACT 3R 18045381 18045386 - 3R_18045381_18045386_- 0.99955266 0.980304914 0.989928787 0.01361025 htl FBtr0083548|FBtr0083550|FBtr0083549 18045214|18045214|18045214 18045730|18045730|18045730 3R - 18045254 18045413 3'utr htl FlyBase G52166.1 GTATATGCGTAGTTCTAAGTTGAACTTAAGACTCGGTTGTATTTGCTGTTGTATTTCATATTGTACTGATCTTTGTAGTATTCGCAGTTTTATACTCGCTAAATTATACTCGTAGCCCATAAACATAAATGTTCTATCTTAGCGTTAGTTGCATGCCGCA 233 18045388 0.823965657 31 226 2282 0.971326165 2.432969291 0.254480287 0.158798283 0.297491039 233 8 0 271 3R:18045254-18045413 6 htl FBtr0083549|FBtr0083548|FBtr0083550 18045214|18045214|18045214 18045730|18045730|18045730 AAGACT 6mer3-8 dme-miR-14-3p 3R - 18045291 18045408 3'utr htl FlyBase G39386.1 TGCGTAGTTCTAAGTTGAACTTAAGACTCGGTTGTATTTGCTGTTGTATTTCATATTGTACTGATCTTTGTAGTATTCGCAGTTTTATACTCGCTAAATTATACTCGTAGCCCATAAA 182 18045388 0.822774116 27 168 1819 0.925795053 1.8162413 0.233215548 0.368131868 0.593639576 182 18 3 262 3R:18045291-18045408 6 84.5 3266 FBgn0010389 31.66666667 1.04 1.59 2.668421053 81.25 53.14465409 2 2 2 0.1 dme-miR-999-3p 6mer2-7 GTTAAC 3R 18045660 18045665 - 3R_18045660_18045665_- 0.999354998 0.646684283 0.823019641 0.249375843 htl FBtr0083548|FBtr0083550|FBtr0083549 18045214|18045214|18045214 18045730|18045730|18045730 3R - 18045646 18045754 stop_codon htl FlyBase G52168.1 CTGCAGAAGTGGTGTAATTATTAAACGAATCAGGATCCTTAGATGAGATCAGGACAATTCAAGCCTGGTTTTTGAACCAAAGTCAAATTGTTAACTAGAGATTATGAAG 19 18045666 0.967657918 10 18 98 0.954545455 1.322219295 0.045454545 0.157894737 0.272727273 19 1 0 21 3R:18045646-18045754 6 htl FBtr0083549|FBtr0083548|FBtr0083550 18045214|18045214|18045214 18045730|18045730|18045730 GTTAAC 6mer2-7 dme-miR-999-3p 3R - 18045644 18045674 3'utr htl FlyBase G39388.1 AGTCAAATTGTTAACTAGAGATTATGAAGTG 5 18045664 0.960952756 4 5 29 1 0.903089987 0.25 0.4 0.625 5 0 0 8 3R:18045644-18045674 6 5.5 3267 FBgn0010389 31.66666667 1.04 1.59 0.173684211 5.288461538 3.459119497 1 -1 0 0.1 dme-miR-2a-2-5p 7mer-A1 GATGAGA 3R 18045707 18045713 - 3R_18045707_18045713_- 0.781148802 0.781299216 0.781224009 0.000106349 htl FBtr0083548|FBtr0083550|FBtr0083549 18045214|18045214|18045214 18045730|18045730|18045730 3R - 18045646 18045754 stop_codon htl FlyBase G52168.1 CTGCAGAAGTGGTGTAATTATTAAACGAATCAGGATCCTTAGATGAGATCAGGACAATTCAAGCCTGGTTTTTGAACCAAAGTCAAATTGTTAACTAGAGATTATGAAG 19 18045715 0.967657918 10 18 98 0.954545455 1.322219295 0.045454545 0.157894737 0.272727273 19 1 0 21 3R:18045646-18045754 7 htl FBtr0083549|FBtr0083548|FBtr0083550 18045214|18045214|18045214 18045730|18045730|18045730 GATGAGA 7mer-A1 dme-miR-2a-2-5p 3R - 18045677 18045723 3'utr htl FlyBase G39389.1 AGGATCCTTAGATGAGATCAGGACAATTCAAGCCTGGTTTTTGAACC 5 18045711 0.943060064 2 5 22 1 1 0 0.6 0.8 5 0 0 10 3R:18045677-18045723 7 4.5 3268 FBgn0010389 31.66666667 1.04 1.59 0.142105263 4.326923077 2.830188679 2 -2 0 0.1 dme-miR-184-5p 6mer3-8 TGATAA 3R 18179762 18179767 - 3R_18179762_18179767_- 1 0.999999981 0.999999991 0 cdm FBtr0083619|FBtr0336472 18179711|18179273 18179916|18179916 3R - 18179753 18179820 3'utr cdm FlyBase G52191.1 GTCAGCTCTGTAAATTGTCTCCAATTTTAACTTAAGTTCAAAAGTTCTCGACTTGATAAACTTTTATT 12 18179768 0.985539527 8 11 87 0.933333333 0.84509804 0.2 0.166666667 0.333333333 12 0 1 14 3R:18179753-18179820 6 cdm FBtr0083619|FBtr0336472 18179711|18179273 18179916|18179916 TGATAA 6mer3-8 dme-miR-184-5p 3R - 18179756 18179786 3'utr cdm FlyBase G39406.1 AGTTCAAAAGTTCTCGACTTGATAAACTTTT 6 18179768 0.733099961 3 5 41 1 0.954242509 0.111111111 0.5 0.666666667 6 0 0 9 3R:18179756-18179786 6 7 3269 FBgn0261532 596.8733333 20.49333333 31.33 0.011727781 0.341574496 0.223428024 1 1 1 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 18179860 18179865 - 3R_18179860_18179865_- 0.999511273 0.998466236 0.998988754 0.000738997 cdm FBtr0083619|FBtr0336472 18179711|18179273 18179916|18179916 3R - 18179851 18179899 3'utr cdm FlyBase G52192.1 AGTGGCCAAATGACATCTTTATCCATCCGGATTTTGATCTAGTTTCTAT 11 18179880 0.767583024 8 10 101 0.928571429 1.113943352 0.071428571 0.181818182 0.357142857 11 1 0 13 3R:18179851-18179899 6 cdm FBtr0083619|FBtr0336472 18179711|18179273 18179916|18179916 TGATCT 6mer3-8 dme-bantam-3p 3R - 18179837 18179927 stop_codon cdm FlyBase G39407.1 AGTTCCAGTGAAATGAGTGTATGCAATAAGTGGCCAAATGACATCTTTATCCATCCGGATTTTGATCTAGTTTCTATAATTGTATTTAGTT 11 18179865 0.993141179 7 9 108 0.846153846 1.041392685 0.076923077 0.090909091 0.230769231 11 2 0 11 3R:18179837-18179927 6 5.5 3270 FBgn0261532 596.8733333 20.49333333 31.33 0.009214685 0.268379961 0.17555059 15 0 7.5 0.1 dme-miR-8-3p 6mer2-7 AGTATT 3R 18192595 18192600 - 3R_18192595_18192600_- 0.999999997 0.999999997 0.999999997 0 Ssdp FBtr0330051|FBtr0083612 18192492|18192492 18194983|18195175 3R - 18192573 18192653 3'utr Ssdp FlyBase G52208.1 AATGAAGGGAATACAAAACAAAAAACCGATTGAATATGGAATATGTTTAAATAAGTATTTTAGTGTTAATTATACAATTTA 22 18192594 0.987054277 7 22 191 1 1.397940009 0.28 0.136363636 0.24 22 0 0 25 3R:18192573-18192653 6 Ssdp FBtr0330051|FBtr0083612 18192492|18192492 18194983|18195175 AGTATT 6mer2-7 dme-miR-8-3p 3R - 18192580 18192609 3'utr Ssdp FlyBase G39418.1 GTTTAAATAAGTATTTTAGTGTTAATTATA 7 18192594 0.632720012 4 7 72 1 0.954242509 0.222222222 0.285714286 0.444444444 7 0 0 9 3R:18192580-18192609 6 10.5 3271 FBgn0011481 1276.61 30.31666667 46.89333333 0.008224908 0.346344145 0.223912425 -6 -6 -6 0.1 dme-miR-980-5p 6mer2-7 AAAAAC 3R 18192787 18192792 - 3R_18192787_18192792_- 0.989389428 1 0.994694714 0.007502827 Ssdp FBtr0330051|FBtr0083612 18192492|18192492 18194983|18195175 3R - 18192780 18192818 3'utr Ssdp FlyBase G52209.1 TTGAGCGTTTCAATTGCTGGATCTATAAAAACCACAAAC 16 18192804 0.969128584 5 15 114 1 1.230448921 0.470588235 0.066666667 0.176470588 15 0 0 17 3R:18192780-18192818 6 Ssdp FBtr0330051|FBtr0083612 18192492|18192492 18194983|18195175 AAAAAC 6mer2-7 dme-miR-980-5p 3R - 18192783 18192925 3'utr Ssdp FlyBase G39420.1 AAATTTATAGTATGTGCTGCATGAATTATATCTAAATTATAGTATGGAATGCAAGCGAAAAAACTTAAATAGTGACTAAGTTAAATTTATTTACTAACGCTTTGGGTTTGAGCGTTTCAATTGCTGGATCTATAAAAACCACA 23 18192804 0.978761285 14 23 167 1 1.477121255 0.2 0.217391304 0.4 23 0 0 30 3R:18192783-18192925 6 7.5 3272 FBgn0011481 1276.61 30.31666667 46.89333333 0.005874934 0.247388675 0.159937447 12 12 12 0.1 dme-miR-276a-3p 7mer-m8 AGTTCCT 3R 18193769 18193775 - 3R_18193769_18193775_- 0.631524642 0.631524272 0.631524457 2.12E-07 Ssdp FBtr0330051|FBtr0083612 18192492|18192492 18194983|18195175 3R - 18193722 18193803 3'utr Ssdp FlyBase G52215.1 AAACAACTAAAATGAAAATCGTTATTTAAGTTCCTTCCAAACGGCGAGCAATAATACCATTTGTATGGCATGAGCATGAGAT 38 18193773 0.983620513 7 37 286 0.977272727 1.33243846 0.227272727 0.131578947 0.25 38 0 1 43 3R:18193722-18193803 7 Ssdp FBtr0330051|FBtr0083612 18192492|18192492 18194983|18195175 AGTTCCT 7mer-m8 dme-miR-276a-3p 3R - 18193754 18193799 3'utr Ssdp FlyBase G39422.1 AACTAAAATGAAAATCGTTATTTAAGTTCCTTCCAAACGGCGAGCA 21 18193773 0.978717758 2 21 142 1 1.505149978 0.25 0.380952381 0.59375 21 0 0 32 3R:18193754-18193799 7 28 3273 FBgn0011481 1276.61 30.31666667 46.89333333 0.021933088 0.923584387 0.597099801 -2 -2 -2 0.1 dme-miR-980-3p 6mer3-8 GGCAGC 3R 18195120 18195125 - 3R_18195120_18195125_- 0.997278836 0.999925963 0.9986024 0.001871853 Ssdp FBtr0083612 18192492 18195175 3R - 18195073 18195203 stop_codon Ssdp FlyBase G52220.2 AGATCATCCGGACTACTTTATGCCATAACAACATCACCAGCAACAGCAGCAGCAGCATCAGCAGCATCTCAACACGGTGGCAGCCGCTGTGGCAGCTGTGGTGGCGGCTGCGGCGTCCAACGGATCGGCGG 91 18195126 0.960292627 10 82 381 0.910891089 1.486666573 0.089108911 0.076923077 0.168316832 91 7 2 92 3R:18195073-18195203 6 Ssdp FBtr0083612|FBtr0083611|FBtr0083613 18192492|18194858|18194858 18195175|18195175|18195175 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 18195085 18195145 3'utr Ssdp FlyBase G39431.1 CAGCAGCATCTCAACACGGTGGCAGCCGCTGTGGCAGCTGTGGTGGCGGCTGCGGCGTCCA 61 18195126 0.962652844 6 55 228 0.870967742 1.908485019 0.021505376 0.344262295 0.569892473 61 12 0 81 3R:18195085-18195145 6 66 3274 FBgn0011481 1276.61 30.31666667 46.89333333 0.051699423 2.177020341 1.407449531 1 1 1 0.1 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 3R 18239827 18239834 - 3R_18239827_18239834_- 0.674979304 0.674979363 0.674979333 7.07E-08 CG7156 FBtr0083606|FBtr0083607 18239418|18239418 18239891|18241598 3R - 18239771 18239871 3'utr CG7156 FlyBase G52239.2 GCTATTGAGTCCGTAAAGTATTTTCTTATTTCGTACTGTACCTGAAATCCCATTTGTGATTCCTTGCTCAGTTCTGATTGGCATTGATTTTGATTACTTTC 393 18239835 0.807096895 22 389 2966 0.992125984 2.702430536 0.035433071 0.226463104 0.401574803 393 4 0 504 3R:18239771-18239871 8 CG7156 FBtr0083606|FBtr0083607 18239418|18239418 18239891|18241598 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R - 18239706 18239877 3'utr CG7156 FlyBase G39446.1 TGCTTTGCTATTGAGTCCGTAAAGTATTTTCTTATTTCGTACTGTACCTGAAATCCCATTTGTGATTCCTTGCTCAGTTCTGATTGGCATTGATTTTGATTACTTTCAAAGAATCTGAAGTCGCTCCATAGCGATTAATTATGTTGTGAATCTGCTATATTATTTTCTATGC 265 18239835 0.983908563 21 260 2036 0.983827493 1.86332286 0.064690027 0.309433962 0.506738544 265 2 4 365 3R:18239706-18239877 8 302.5 3275 FBgn0038588 127.6666667 6.006666667 9.273333333 2.369451697 50.36071032 32.62041697 1 1 1 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 3R 18240719 18240724 - 3R_18240719_18240724_- 0.999690159 0.99989866 0.999794409 0.000147432 CG7156 FBtr0083607 18239418 18241598 3R - 18240686 18240746 5'utr CG7156 FlyBase G52242.1 GGAGGGCGGCATGTTGTACGATTACCTGCAGAGCTACACGCCCACGAGTAGTAAGAGTGTC 16 18240725 0.979900851 2 14 96 0.909090909 1 0.272727273 0.375 0.545454545 16 1 1 20 3R:18240686-18240746 6 CG7156 FBtr0083607 18239418 18241598 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 3R - 18240663 18240743 5'utr CG7156 FlyBase G39447.1 GGGCGGCATGTTGTACGATTACCTGCAGAGCTACACGCCCACGAGTAGTAAGAGTGTCAATTATGGAGAGCTTTTTCCCTC 9 18240725 0.978685947 5 8 54 0.933333333 0.84509804 0.533333333 0.333333333 0.6 9 0 1 14 3R:18240663-18240743 6 11 3276 FBgn0038588 127.6666667 6.006666667 9.273333333 0.08616188 1.831298557 1.186196981 1 1 1 0.1 dme-miR-184-3p 7mer-A1 CCGTCCA 3R 18241233 18241239 - 3R_18241233_18241239_- 0.823334128 0.823335923 0.823335026 1.27E-06 CG7156 FBtr0083607 18239418 18241598 3R - 18241207 18241278 5'utr CG7156 FlyBase G52244.1 GCGACTACATATATGAGGCGGCTCTAGAGTTCAGTCATGCCGTCCAAGCGGAGGTTAACCTGGAGTATGCCG 79 18241241 0.848274654 5 76 419 0.95505618 1.929418926 0.359550562 0.126582278 0.224719101 79 4 0 85 3R:18241207-18241278 7 CG7156 FBtr0083607 18239418 18241598 CCGTCCA 7mer-A1 dme-miR-184-3p 3R - 18241197 18241265 5'utr CG7156 FlyBase G39449.1 TGAGGCGGCTCTAGAGTTCAGTCATGCCGTCCAAGCGGAGGTTAACCTGGAGTATGCCGAAGCCCACGA 35 18241241 0.966857282 4 32 168 0.918367347 1.176091259 0.224489796 0.285714286 0.489795918 35 2 2 45 3R:18241197-18241265 7 54 3277 FBgn0038588 127.6666667 6.006666667 9.273333333 0.422976501 8.990011099 5.823148814 2 2 2 0.1 dme-miR-33-5p 6mer3-8 CAATGC 3R 18248433 18248438 + 3R_18248433_18248438_+ 0.999999967 1 0.999999984 0 14-3-3epsilon FBtr0083565|FBtr0083567|FBtr0083568|FBtr0083566 18248287|18248287|18248287|18248287 18248579|18248579|18250550|18250279 3R + 18248390 18248441 3'utr 14-3-3epsilon FlyBase G43729.1 CAACAACAACACGACAACAACTTCAAGAACAACAACATGGAACCAATGCGGC 11 18248427 0.797135019 3 8 8 0.928571429 1.113943352 0.142857143 0.272727273 0.428571429 11 1 0 13 3R:18248390-18248441 6 14-3-3epsilon FBtr0083566|FBtr0083568|FBtr0083567|FBtr0083565 18248287|18248287|18248287|18248287 18250279|18250550|18248579|18248579 CAATGC 6mer3-8 dme-miR-33-5p 3R + 18248415 18248445 3'utr 14-3-3epsilon FlyBase G33047.1 AGAACAACAACATGGAACCAATGCGGCAACA 6 18248427 0.597286818 2 5 5 0.875 0.84509804 0 0.333333333 0.5 6 1 0 7 3R:18248415-18248445 6 6 3278 FBgn0020238 26098.09667 2256.556667 3469.193333 0.000229902 0.002658918 0.001729509 6 6 6 0.1 dme-miR-1006-3p 6mer2-7 GAATTT 3R 18248773 18248778 + 3R_18248773_18248778_+ 0.99998866 0.998335867 0.999162263 0.001168706 14-3-3epsilon FBtr0083568|FBtr0083566 18248287|18248287 18250550|18250279 3R + 18248702 18248773 3'utr 14-3-3epsilon FlyBase G43732.2 ATTAAGTTGGCGTCGCTTCGCAATTTGGCTCCTTAACGTTAGAAAACTGCAACATCAAGTCTACTACATTTG 18 18248762 0.745611948 12 16 115 0.95 1.278753601 0.2 0.111111111 0.2 18 1 0 19 3R:18248702-18248773 1 14-3-3epsilon FBtr0083566|FBtr0083568 18248287|18248287 18250279|18250550 GAATTT 6mer2-7 dme-miR-1006-3p 3R + 18248741 18248815 3'utr 14-3-3epsilon FlyBase G33050.1 TAGAAAACTGCAACATCAAGTCTACTACATTTGAATTTTTTGCATTCGAGAAACCAAGCATTTTATTATATTTGA 7 18248758 0.991670987 6 6 55 0.875 0.84509804 0.125 0.142857143 0.25 7 1 0 7 3R:18248741-18248815 6 2.5 3279 FBgn0020238 26098.09667 2256.556667 3469.193333 9.58E-05 0.001107883 0.000720629 11 15 13 0.1 dme-miR-980-3p 6mer3-8 GGCAGC 3R 18256341 18256346 + 3R_18256341_18256346_+ 0.626591926 0.998891947 0.812741937 0.263255855 moi FBtr0299938 18256210 18257677 3R + 18256314 18256368 3'utr moi FlyBase G43740.1 TTCAAAACGTTACCTGGAAAGAATTCTGGCAGCGTGAGGGGCATGAGCTGCTCGA 8 18256340 0.941656517 4 8 33 1 0.903089987 0.5 0 0 8 0 0 8 3R:18256314-18256368 6 moi FBtr0299938 18256210 18257677 GGCAGC 6mer3-8 dme-miR-980-3p 3R + 18256319 18256367 3'utr moi FlyBase G33055.1 AACGTTACCTGGAAAGAATTCTGGCAGCGTGAGGGGCATGAGCTGCTCG 6 18256340 0.930580219 2 6 26 1 0.84509804 0.857142857 0.166666667 0.285714286 6 0 0 7 3R:18256319-18256367 6 6 3280 FBgn0261019 238.14 13.89333333 21.31333333 0.025195263 0.431861804 0.281513919 1 1 1 0.1 dme-miR-34-5p 7mer-A1 ACTGCCA 3R 18256673 18256679 + 3R_18256673_18256679_+ 0.818602364 0.818922874 0.818762619 0.000226628 moi FBtr0299938 18256210 18257677 3R + 18256651 18256702 3'utr moi FlyBase G43742.1 AGAGGAGGACGAATCATACTTGACTGCCAACGACGATCCCGAGGATTGTGAC 21 18256670 0.954755784 5 20 93 0.956521739 1.041392685 0.086956522 0.095238095 0.173913043 21 0 1 22 3R:18256651-18256702 7 moi FBtr0299938 18256210 18257677 ACTGCCA 7mer-A1 dme-miR-34-5p 3R + 18256650 18256688 3'utr moi FlyBase G33056.1 AAGAGGAGGACGAATCATACTTGACTGCCAACGACGATC 9 18256670 0.939734668 3 9 36 1 1.301029996 0.3 0.555555556 0.8 9 0 0 20 3R:18256650-18256688 7 15 3281 FBgn0261019 238.14 13.89333333 21.31333333 0.062988158 1.079654511 0.703784798 3 3 3 0.1 dme-miR-999-3p 6mer3-8 AGTTAA 3R 18289156 18289161 - 3R_18289156_18289161_- 0.999558316 0.809198469 0.904378392 0.134604705 l(3)05822 FBtr0334313|FBtr0334314|FBtr0083596|FBtr0083595 18288864|18288864|18288864|18288864 18289578|18289578|18289578|18289578 3R - 18288954 18289196 3'utr l(3)05822 FlyBase G52262.1 CAACACAATAGAGCAGGCAAAAAATATTGTATATAAGTTAAAATGTACGTGATTTCTATTAATGTTTAATTATTTAAATTGAGTTTAGTTAGACGCTTAGTTAGGCACATTTACAGATTCCAATTTACGATGCAAGCCGTTTGTTTATGTATGTATTAATAATTCTTTCAAATGCTTAGGGCAATTCATCTCCGAGTGAGAAGATGAATGGTTATTTATTTGTCCCTTGCAGAGTGCTACTCT 191 18289143 0.949828572 37 177 1645 0.954954955 1.326335861 0.126126126 0.181818182 0.310810811 187 1 9 212 3R:18288954-18289196 6 l(3)05822 FBtr0083595|FBtr0083596|FBtr0334314|FBtr0334313 18288864|18288864|18288864|18288864 18289578|18289578|18289578|18289578 AGTTAA 6mer3-8 dme-miR-999-3p 3R - 18289123 18289192 3'utr l(3)05822 FlyBase G39466.1 ACAATAGAGCAGGCAAAAAATATTGTATATAAGTTAAAATGTACGTGATTTCTATTAATGTTTAATTATT 135 18289143 0.835374981 12 128 1256 0.958115183 1.41735305 0.089005236 0.358208955 0.54973822 134 2 6 183 3R:18289123-18289192 6 116 3282 FBgn0010877 1339.8 56.08333333 85.52666667 0.086580087 2.068350669 1.356302128 -18 -18 -18 0.1 dme-miR-184-5p 6mer2-7 GATAAG 3R 18289517 18289522 - 3R_18289517_18289522_- 0.963820744 0.965438077 0.96462941 0.001143675 l(3)05822 FBtr0334313|FBtr0334314|FBtr0083596|FBtr0083595 18288864|18288864|18288864|18288864 18289578|18289578|18289578|18289578 3R - 18289480 18289570 3'utr l(3)05822 FlyBase G52265.1 AGCCCCCGATCTTTAACGATCTATAAATTGTATACCCGAAACATTGTCGATAAGCGAGTAGATGTCGAGCGAACTGAATCATATACACACA 1154 18289527 0.842697144 15 1133 5383 0.98249453 2.226277609 0.087527352 0.160311958 0.29321663 1154 17 7 1347 3R:18289480-18289570 6 l(3)05822 FBtr0083595|FBtr0083596|FBtr0334314|FBtr0334313 18288864|18288864|18288864|18288864 18289578|18289578|18289578|18289578 GATAAG 6mer2-7 dme-miR-184-5p 3R - 18289474 18289554 3'utr l(3)05822 FlyBase G39469.1 CGATCTATAAATTGTATACCCGAAACATTGTCGATAAGCGAGTAGATGTCGAGCGAACTGAATCATATACACACACACATA 763 18289527 0.837049553 13 748 3398 0.980392157 2.740362689 0.087344029 0.346002621 0.555258467 763 21 1 1100 3R:18289474-18289554 6 893.5 3283 FBgn0010877 1339.8 56.08333333 85.52666667 0.666890581 15.93164933 10.44703406 5 5 5 0.1 dme-miR-8-3p 7mer-m8 CAGTATT 3R 18390505 18390511 - 3R_18390505_18390511_- 0.650523796 0.627806409 0.639165103 0.016063628 Vha100-2 FBtr0083656|FBtr0083657 18390321|18390321 18390624|18390624 3R - 18390446 18390527 3'utr Vha100-2 FlyBase G52289.1 ATTTTTTGGATATTGTCAGTATTGTGGTGCTCTTCCCACATTTTTGTATCCTCCGTTGTGTATTCCATTTGTAGTCAAAGTA 112 18390512 0.794389871 17 103 1249 0.912698413 2.06069784 0.30952381 0.098214286 0.198412698 112 11 0 115 3R:18390446-18390527 7 Vha100-2 FBtr0083657|FBtr0083656 18390321|18390321 18390624|18390624 CAGTATT 7mer-m8 dme-miR-8-3p 3R - 18390479 18390580 3'utr Vha100-2 FlyBase G39481.2 TACCCCCAGCCCGAACTATTTTGATTGTTTGTTAAATGTTTTTGTTTTGTTTAATTTTTTGGATATTGTCAGTATTGTGGTGCTCTTCCCACATTTTTGTAT 78 18390512 0.993026676 14 70 878 0.890909091 1.514104821 0.309090909 0.333333333 0.527272727 78 10 2 98 3R:18390479-18390580 7 88 3284 FBgn0028670 809.4533333 32.13666667 48.88333333 0.108715347 2.738305155 1.800204569 1 1 1 0.1 dme-miR-305-3p 6mer3-8 ATGTGC 3R 18390609 18390614 - 3R_18390609_18390614_- 0.999890774 0.999907126 0.99989895 1.15E-05 Vha100-2 FBtr0083656|FBtr0083657 18390321|18390321 18390624|18390624 3R - 18390552 18390666 stop_codon Vha100-2 FlyBase G52290.1 TTCAGCTTCAAGGCCATTCTCGATGGCGAAGAGGAGGAGTAAACCCATCCAAATGTGCTCAAACTAGGGAAACGTGTATACAATTATACCCCCAGCCCGAACTATTTTGATTGTT 159 18390613 0.948550113 6 156 680 0.983050847 1.939519253 0.276836158 0.088050314 0.18079096 159 2 1 174 3R:18390552-18390666 6 Vha100-2 FBtr0083657|FBtr0083656 18390321|18390321 18390624|18390624 ATGTGC 6mer3-8 dme-miR-305-3p 3R - 18390586 18390642 stop_codon Vha100-2 FlyBase G39482.1 GGCGAAGAGGAGGAGTAAACCCATCCAAATGTGCTCAAACTAGGGAAACGTGTATAC 77 18390613 0.926793328 3 76 319 1 2.053078443 0.274336283 0.38961039 0.584070796 77 0 0 113 3R:18390586-18390642 6 113 3285 FBgn0028670 809.4533333 32.13666667 48.88333333 0.139600389 3.516232756 2.311626321 -1 -1 -1 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 3R 18400472 18400477 - 3R_18400472_18400477_- 0.999999451 1 0.999999726 3.54E-07 CG12333 FBtr0083655 18400371 18400826 3R - 18400421 18400569 3'utr CG12333 FlyBase G52310.1 TATCATTGTTATAGCATACGTATGTATATGCGTTGGGACTGGGCTAAACTCTTCGGAGTGCAGAGCTTCCGATGTCCAGACCCGATTTTATCTGTGTTTTACTACCATAATACATATTATAGACGTCTAAGGCATTAACGCTTTAGCCA 30 18400479 0.990918103 12 28 303 0.885714286 1.491361694 0.228571429 0.166666667 0.285714286 30 4 0 31 3R:18400421-18400569 6 CG12333 FBtr0083655 18400371 18400826 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 18400463 18400544 3'utr CG12333 FlyBase G39497.1 ATATGCGTTGGGACTGGGCTAAACTCTTCGGAGTGCAGAGCTTCCGATGTCCAGACCCGATTTTATCTGTGTTTTACTACCA 17 18400480 0.99169923 8 15 173 0.923076923 1.079181246 0.384615385 0.411764706 0.615384615 17 1 1 24 3R:18400463-18400544 6 16 3286 FBgn0038617 154.6666667 8.656666667 13.23 0.103448276 1.848286484 1.209372638 2 3 2.5 0.1 dme-miR-263a-5p 6mer2-7 TGCCAT 3R 18404478 18404483 + 3R_18404478_18404483_+ 0.990513108 0.90341297 0.946963039 0.061589071 koko FBtr0334146|FBtr0334148|FBtr0334149|FBtr0334147 18404444|18404444|18404444|18404444 18404726|18404726|18404726|18404726 3R + 18404416 18404491 stop_codon koko FlyBase G43770.1 AAGAACGAGGGCTTCCTGAATGCCACCTAATCGCTGAGAGAGACTGCCAAAACCATTCCTTCTGCCATCTGAACTT 7 18404471 0.963368552 5 7 38 1 1 0.2 0.285714286 0.5 7 0 0 10 3R:18404416-18404491 6 koko FBtr0334146|FBtr0334148|FBtr0334149|FBtr0334147 18404444|18404444|18404444|18404444 18404726|18404726|18404726|18404726 TGCCAT 6mer2-7 dme-miR-263a-5p 3R + 18404444 18404491 stop_codon koko FlyBase G33079.1 AATCGCTGAGAGAGACTGCCAAAACCATTCCTTCTGCCATCTGAACTT 6 18404471 0.723209429 4 6 31 1 0.954242509 0 0.5 0.666666667 6 0 0 9 3R:18404444-18404491 6 3 3287 FBgn0264816 41 4.086666667 6.296666667 0.073170732 0.734094617 0.476442562 7 7 7 0.1 dme-miR-1003-3p 7mer-A1 TGTGAGA 3R 18406767 18406773 - 3R_18406767_18406773_- 0.823344292 0.823340343 0.823342318 2.83E-06 CG31122 FBtr0083653|FBtr0301432|FBtr0333831 18406629|18406629|18406062 18407464|18407881|18407881 3R - 18406751 18406794 3'utr CG31122 FlyBase G52315.1 CTGGGGGCAAAGTATCAAATTTGTGAGACGAGAGCGTCGATAGC 19 18406774 0.87305092 4 18 112 0.961538462 1.096910013 0.346153846 0.263157895 0.461538462 19 0 1 25 3R:18406751-18406794 7 CG31122 FBtr0333831|FBtr0301432|FBtr0083653 18406062|18406629|18406629 18407881|18407881|18407464 TGTGAGA 7mer-A1 dme-miR-1003-3p 3R - 18406748 18406789 3'utr CG31122 FlyBase G39502.1 GGCAAAGTATCAAATTTGTGAGACGAGAGCGTCGATAGCAAT 12 18406774 0.690453005 2 11 64 1 1.255272505 0.444444444 0.416666667 0.611111111 12 0 0 18 3R:18406748-18406789 7 15 3288 FBgn0051122 626.0666667 23.62 36.17666667 0.02395911 0.635055038 0.414631899 1 1 1 0.1 dme-miR-8-3p 7mer-A1 AGTATTA 3R 18406894 18406900 - 3R_18406894_18406900_- 0.822676413 0.821079066 0.821877739 0.001129462 CG31122 FBtr0083653|FBtr0301432|FBtr0333831 18406629|18406629|18406062 18407464|18407881|18407881 3R - 18406844 18406925 3'utr CG31122 FlyBase G52316.1 ACACACCCACAAAGCCCTCTGATTAAGTATTACTTAGCGTACGTAAGCTAACTTTAAGTTGCAACTGGCAAAAAGCAAGCCA 49 18406903 0.989206283 7 43 409 0.873015873 1.263241435 0.079365079 0.244897959 0.412698413 49 6 2 55 3R:18406844-18406925 7 CG31122 FBtr0333831|FBtr0301432|FBtr0083653 18406062|18406629|18406629 18407881|18407881|18407464 AGTATTA 7mer-A1 dme-miR-8-3p 3R - 18406865 18406988 3'utr CG31122 FlyBase G39503.1 CCAATGAATTTATACATCATCCGCACAGACGCATTAATCTAACCAGCCTAAAATCTAAATCACACACACCCACAAAGCCCTCTGATTAAGTATTACTTAGCGTACGTAAGCTAACTTTAAGTTG 35 18406903 0.985723309 12 33 260 0.96 1.681241237 0.02 0.285714286 0.5 35 2 0 48 3R:18406865-18406988 7 37 3289 FBgn0051122 626.0666667 23.62 36.17666667 0.059099137 1.566469094 1.022758684 3 3 3 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3R 18407070 18407076 - 3R_18407070_18407076_- 0.521223852 0.521223853 0.521223852 0 CG31122 FBtr0083653|FBtr0301432|FBtr0333831 18406629|18406629|18406062 18407464|18407881|18407881 3R - 18407015 18407147 3'utr CG31122 FlyBase G52318.1 GCTGATTTTACAGACCTCTCTTATTTTATACAAACACTCCATGCTATTTATTTGTAATTGATGAAAAGATTTGTGATTTGCGCACATGATATAAAGTAAACATCGTAGAGCAAGCACTGTAATCGTAGCGTGT 109 18407077 0.845944009 16 106 824 0.977272727 1.633468456 0.431818182 0.155963303 0.303030303 109 1 2 129 3R:18407015-18407147 7 CG31122 FBtr0333831|FBtr0301432|FBtr0083653 18406062|18406629|18406629 18407881|18407881|18407464 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 18407020 18407092 3'utr CG31122 FlyBase G39504.1 AATTGATGAAAAGATTTGTGATTTGCGCACATGATATAAAGTAAACATCGTAGAGCAAGCACTGTAATCGTAG 67 18407070 0.979814043 7 67 468 1 2.004321374 0.514851485 0.402985075 0.603960396 67 0 0 101 3R:18407020-18407092 7 79 3290 FBgn0051122 626.0666667 23.62 36.17666667 0.126184645 3.344623201 2.183728001 1 -6 -2.5 0.1 dme-miR-995-5p 6mer3-8 AATTCG 3R 18407244 18407249 - 3R_18407244_18407249_- 0.999969407 0.9999267 0.999948054 3.02E-05 CG31122 FBtr0083653|FBtr0301432|FBtr0333831 18406629|18406629|18406062 18407464|18407881|18407881 3R - 18407184 18407259 3'utr CG31122 FlyBase G52319.1 GCATTTTTGTAATTCGTCCCAAACTGAAAGCAAAATCTCATCAGTGCAATAATATACATAATCCGAATATATATAT 18 18407247 0.985734683 5 15 134 0.80952381 1.230448921 0.142857143 0.166666667 0.285714286 18 4 0 17 3R:18407184-18407259 6 CG31122 FBtr0333831|FBtr0301432|FBtr0083653 18406062|18406629|18406629 18407881|18407881|18407464 AATTCG 6mer3-8 dme-miR-995-5p 3R - 18407217 18407276 3'utr CG31122 FlyBase G39505.1 TTGTATCTTTGATCATCGCATTTTTGTAATTCGTCCCAAACTGAAAGCAAAATCTCATCA 13 18407247 0.987769864 5 12 109 0.9375 1.176091259 0.0625 0.153846154 0.3125 13 1 0 15 3R:18407217-18407276 6 10 3291 FBgn0051122 626.0666667 23.62 36.17666667 0.01597274 0.423370025 0.276421266 -2 -2 -2 0.1 dme-miR-965-3p 7mer-m8 TACGCTT 3R 18407474 18407480 - 3R_18407474_18407480_- 0.620204855 0.620204855 0.620204855 0 CG31122 FBtr0301432|FBtr0333831 18406629|18406062 18407881|18407881 3R - 18407307 18407517 3'utr CG31122 FlyBase G52320.1 AGTGTCGCTCGAAACGCAAACTGCAGAAATTGTATTATACGCTTTGCCGTTAGATCTGTAGCCTAACTATATCTATGTGTACTTGTACGAGAGAAAGTTTCTTAGAACCACCAGCAGCATCAGCACTTAGCTTAAGTGGAGTCACACCTACCACGTCCTATATATATTATATGTATGTCCAGTCCCTTCGTCCCTTCATTTTTTGTACATG 77 18407474 0.986065146 27 70 615 0.917647059 1.591064607 0.129411765 0.090909091 0.176470588 77 6 1 78 3R:18407307-18407517 7 CG31122 FBtr0333831|FBtr0301432 18406062|18406629 18407881|18407881 TACGCTT 7mer-m8 dme-miR-965-3p 3R - 18407349 18407525 3'utr CG31122 FlyBase G39506.1 TCATCATCAGTGTCGCTCGAAACGCAAACTGCAGAAATTGTATTATACGCTTTGCCGTTAGATCTGTAGCCTAACTATATCTATGTGTACTTGTACGAGAGAAAGTTTCTTAGAACCACCAGCAGCATCAGCACTTAGCTTAAGTGGAGTCACACCTACCACGTCCTATATATATTA 65 18407473 0.986390105 20 61 519 0.948453608 1.662757832 0.164948454 0.384615385 0.587628866 65 4 1 92 3R:18407349-18407525 7 42.5 3292 FBgn0051122 626.0666667 23.62 36.17666667 0.067884144 1.799322608 1.174790381 -6 -7 -6.5 0.1 dme-bantam-3p 7mer-m8 TGATCTC 3R 18407706 18407712 - 3R_18407706_18407712_- 0.661615243 0.661615243 0.661615243 0 CG31122 FBtr0301432|FBtr0333831 18406629|18406062 18407881|18407881 3R - 18407662 18407776 3'utr CG31122 FlyBase G52321.1 CAGCAGCTGCTGGCTGCCGCCCCGGAGCTCGCGCTGGCCTCCTCATCGCGCCTGGCTGCGGCCCTGATCTCGTCGGCGGTGGCTCTGAGCGCCTCGTCCGCGAGCCTTGTAAATA 105 18407704 0.975645542 9 101 639 0.962962963 2.017033339 0.287037037 0.028571429 0.055555556 105 4 0 104 3R:18407662-18407776 7 CG31122 FBtr0333831|FBtr0301432 18406062|18406629 18407881|18407881 TGATCTC 7mer-m8 dme-bantam-3p 3R - 18407685 18407741 3'utr CG31122 FlyBase G39507.1 GGCCTCCTCATCGCGCCTGGCTGCGGCCCTGATCTCGTCGGCGGTGGCTCTGAGCGC 59 18407704 0.672863931 7 57 332 0.989130435 1.959041392 0.369565217 0.305084746 0.554347826 59 1 0 91 3R:18407685-18407741 7 77.5 3293 FBgn0051122 626.0666667 23.62 36.17666667 0.123788734 3.281117697 2.142264812 -8 -8 -8 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 18414739 18414744 - 3R_18414739_18414744_- 0.999884291 0.999983959 0.999934125 7.05E-05 fru FBtr0083644 18414271 18416776 3R - 18414733 18414768 3'utr fru FlyBase G52329.1 CCACTACTACACACAGATTTATGTACCAAAAATGTA 12 18414746 0.796212113 3 11 72 0.923076923 1.079181246 0 0.083333333 0.153846154 12 1 0 12 3R:18414733-18414768 6 fru FBtr0083644 18414271 18416776 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 18414731 18414792 3'utr fru FlyBase G39512.1 AAATAGCACAGATGTTAAGGCAAACCACTACTACACACAGATTTATGTACCAAAAATGTAAT 8 18414748 0.970654933 7 8 46 1 1.041392685 0 0.25 0.454545455 8 0 0 11 3R:18414731-18414792 6 8 3294 FBgn0004652 1186.113333 24.98 38.30666667 0.006744718 0.320256205 0.208840933 2 4 3 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3R 18415042 18415047 - 3R_18415042_18415047_- 0.769322057 0.912299603 0.84081083 0.10110036 fru FBtr0083644 18414271 18416776 3R - 18415024 18415066 3'utr fru FlyBase G52331.1 AAAATTGTTATCTTTCGGTCCAAAGCACAAAATGTATAAAATT 17 18415053 0.954872748 3 17 120 1 1.322219295 0.380952381 0.176470588 0.333333333 17 0 0 21 3R:18415024-18415066 6 fru FBtr0083644 18414271 18416776 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 18415028 18415062 3'utr fru FlyBase G39514.1 TTGTTATCTTTCGGTCCAAAGCACAAAATGTATAA 7 18415053 0.975142433 3 7 44 1 1.041392685 0.181818182 0.571428571 0.727272727 7 0 0 11 3R:18415028-18415062 6 12 3295 FBgn0004652 1186.113333 24.98 38.30666667 0.010117077 0.480384307 0.313261399 6 6 6 0.1 dme-miR-283-5p 8mer-m1 TGATATTT 3R 18415187 18415194 - 3R_18415187_18415194_- 0.397979755 0.448675298 0.423327527 0.035847132 fru FBtr0083644 18414271 18416776 3R - 18415174 18415210 3'utr fru FlyBase G52333.1 AATATAAAATTAAATGTGATATTTTCGGCACAAAACT 8 18415188 0.981056465 5 6 71 0.727272727 0.602059991 0 0.25 0.454545455 8 2 1 8 3R:18415174-18415210 8 fru FBtr0083644 18414271 18416776 TGATATTT 8mer-m1 dme-miR-283-5p 3R - 18415181 18415217 3'utr fru FlyBase G39515.1 AATATAAAATATAAAATTAAATGTGATATTTTCGGCA 11 18415187 0.650741089 6 11 98 1 1.176091259 0 0.272727273 0.466666667 11 0 0 15 3R:18415181-18415217 8 9.5 3296 FBgn0004652 1186.113333 24.98 38.30666667 0.008009353 0.380304243 0.247998608 -6 -7 -6.5 0.1 dme-miR-2a-2-5p 7mer-m1 GATGAGG 3R 18415883 18415889 - 3R_18415883_18415889_- 0.825582369 0.825575479 0.825578924 4.88E-06 fru FBtr0083641|FBtr0083644 18415471|18414271 18416776|18416776 3R - 18415773 18416033 3'utr fru FlyBase G52338.1 GAGGATCAGGATGAGGATCAGCCAGCACAGCAACAGTCACCCACAAATACTACTCATACGAAGGTCACATTAGGTTTTAGTTTACTTTAATTTGTAATGTCTAGATTTTAGTGTTAACCGATATGTTCTGCGGAGTAGGAAACGGATGAGGGCTACTCAACCAACTACAAAGAAATTTTCATATACCTCAAATGCATTTCAGTTTTATTGTTGATTGCTTTAATTTTAGTCTACGTAGTCAGTTAGCACTTATACATAAAG 95 18415906 0.984839239 30 87 701 0.916666667 1.51851394 0.203703704 0.127659574 0.240740741 94 7 2 99 3R:18415773-18416033 7 fru FBtr0083644|FBtr0083641 18414271|18415471 18416776|18416776 GATGAGG 7mer-m1 dme-miR-2a-2-5p 3R - 18415814 18415933 3'utr fru FlyBase G39520.2 CTAGATTTTAGTGTTAACCGATATGTTCTGCGGAGTAGGAAACGGATGAGGGCTACTCAACCAACTACAAAGAAATTTTCATATACCTCAAATGCATTTCAGTTTTATTGTTGATTGCTT 53 18415905 0.963084463 14 50 360 0.917808219 1.826074803 0.219178082 0.339622642 0.520547945 53 6 0 67 3R:18415814-18415933 7 13 3297 FBgn0004652 1186.113333 24.98 38.30666667 0.010960167 0.520416333 0.339366516 17 16 16.5 0.1 dme-miR-12-5p 6mer3-8 AATACT 3R 18416167 18416172 - 3R_18416167_18416172_- 0.999825378 0.999910979 0.999868178 6.05E-05 fru FBtr0083641|FBtr0083644 18415471|18414271 18416776|18416776 3R - 18416087 18416173 3'utr fru FlyBase G52339.1 TAATACTAGAGAGAGAAAGTCGAGGAGAATCGTTTTGAGCCGATTCAGCAAATTGGGGTCACTACCACATCACGCGGGGTCACCAGC 19 18416143 0.847314761 10 15 73 0.761904762 0.903089987 0.095238095 0.105263158 0.19047619 19 4 1 16 3R:18416087-18416173 6 fru FBtr0083644|FBtr0083641 18414271|18415471 18416776|18416776 AATACT 6mer3-8 dme-miR-12-5p 3R - 18416127 18416175 3'utr fru FlyBase G39522.1 ACTAATACTAGAGAGAGAAAGTCGAGGAGAATCGTTTTGAGCCGATTCA 7 18416168 0.922829976 5 6 31 0.909090909 1 0.363636364 0.428571429 0.636363636 7 1 0 10 3R:18416127-18416175 6 5.5 3298 FBgn0004652 1186.113333 24.98 38.30666667 0.004636994 0.220176141 0.143578141 -29 -4 -16.5 0.1 dme-miR-31a-5p 6mer3-8 TCTTGC 3R 18416530 18416535 - 3R_18416530_18416535_- 0.833307275 0.756447909 0.794877592 0.054347803 fru FBtr0083641|FBtr0083644 18415471|18414271 18416776|18416776 3R - 18416507 18416561 3'utr fru FlyBase G52342.1 AATCGCTGCAGTTCTAGGTGGATTTTTCTTGCATTTAGTCGTCGTCCAGTCGTGT 32 18416533 0.907746261 5 32 390 1 1.556302501 0.277777778 0.09375 0.194444444 32 0 0 36 3R:18416507-18416561 6 fru FBtr0083644|FBtr0083641 18414271|18415471 18416776|18416776 TCTTGC 6mer3-8 dme-miR-31a-5p 3R - 18416491 18416546 3'utr fru FlyBase G39525.1 AGGTGGATTTTTCTTGCATTTAGTCGTCGTCCAGTCGTGTACATTACCCACTAGCT 17 18416533 0.993504078 2 16 195 0.956521739 1.342422681 0.695652174 0.294117647 0.47826087 17 1 0 22 3R:18416491-18416546 6 23.5 3299 FBgn0004652 1186.113333 24.98 38.30666667 0.019812609 0.940752602 0.61347024 -2 -2 -2 0.1 dme-miR-79-3p 7mer-A1 AGCTTTA 3R 18416733 18416739 - 3R_18416733_18416739_- 0.823349562 0.823347873 0.823348718 1.20E-06 fru FBtr0083641|FBtr0083644 18415471|18414271 18416776|18416776 3R - 18416728 18416777 stop_codon fru FlyBase G52343.1 AGGGCGTGGCCGGGGCCCAAGTGCAGCCCATCACCGCCAGCTTTACCAGC 10 18416747 0.836871863 3 10 26 1 1.079181246 0.166666667 0.2 0.333333333 10 0 0 12 3R:18416728-18416777 7 fru FBtr0083644|FBtr0083641 18414271|18415471 18416776|18416776 AGCTTTA 7mer-A1 dme-miR-79-3p 3R - 18416724 18416758 3'utr fru FlyBase G39526.1 AGTGCAGCCCATCACCGCCAGCTTTACCAGCAGCA 6 18416747 0.821158962 3 5 16 0.875 0.84509804 0 0.333333333 0.5 6 1 0 7 3R:18416724-18416758 7 5 3300 FBgn0004652 1186.113333 24.98 38.30666667 0.004215449 0.200160128 0.130525583 8 8 8 0.1 dme-miR-92b-3p 8mer-A1 GTGCAATA 3R 18419914 18419921 - 3R_18419914_18419921_- 0.590022467 0.622245023 0.606133745 0.022784748 fru FBtr0330040|FBtr0083640|FBtr0083650|FBtr0083645 18418714|18418714|18418714|18418714 18422076|18422637|18422637|18422637 3R - 18419865 18419935 3'utr fru FlyBase G52347.1 GAATCGTATCGTATGTGCAATATGACTAGTTTTCGTTTAAGGTGCAGGAGGATGGATAATGGATGATGAAT 8 18419922 0.980097056 4 8 55 1 0.954242509 0.111111111 0.125 0.222222222 8 0 0 9 3R:18419865-18419935 8 fru FBtr0083650|FBtr0083645|FBtr0083640|FBtr0330040 18418714|18418714|18418714|18418714 18422637|18422637|18422637|18422076 GTGCAATA 8mer-A1 dme-miR-92b-3p 3R - 18419893 18419931 3'utr fru FlyBase G39528.1 CGTATCGTATGTGCAATATGACTAGTTTTCGTTTAAGGT 9 18419922 0.942952494 4 9 60 1 1.255272505 0.166666667 0.555555556 0.777777778 9 0 0 18 3R:18419893-18419931 8 7.5 3301 FBgn0004652 1186.113333 24.98 38.30666667 0.006323173 0.300240192 0.195788375 1 1 1 0.1 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 3R 18419992 18419999 - 3R_18419992_18419999_- 0.625363785 0.625363284 0.625363534 3.54E-07 fru FBtr0330040|FBtr0083640|FBtr0083650|FBtr0083645 18418714|18418714|18418714|18418714 18422076|18422637|18422637|18422637 3R - 18419937 18420034 3'utr fru FlyBase G52348.1 TCGAAAGAATTCTATCATTTGTGTGGTATGCAAAATGGTGCTAAATCCAAATATACTTTAAAGTATACCGAGTAGAACGAGAGGAGGCCAGTACTCCT 68 18419999 0.981125282 10 65 467 0.948051948 1.86332286 0.337662338 0.132352941 0.233766234 68 4 0 73 3R:18419937-18420034 8 fru FBtr0083650|FBtr0083645|FBtr0083640|FBtr0330040 18418714|18418714|18418714|18418714 18422637|18422637|18422637|18422076 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 3R - 18419975 18420023 3'utr fru FlyBase G39529.1 CTATCATTTGTGTGGTATGCAAAATGGTGCTAAATCCAAATATACTTTA 32 18419999 0.885883284 4 31 215 0.975 1.591064607 0.275 0.21875 0.375 32 1 0 39 3R:18419975-18420023 8 45.5 3302 FBgn0004652 1186.113333 24.98 38.30666667 0.038360584 1.821457166 1.187782805 0 0 0 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 18420163 18420169 - 3R_18420163_18420169_- 0.747542486 0.746683163 0.747112824 0.000607617 fru FBtr0330040|FBtr0330040|FBtr0330040|FBtr0083640|FBtr0083640|FBtr0083640|FBtr0083650|FBtr0083650|FBtr0083650|FBtr0083645|FBtr0083645|FBtr0083645 18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714 18422076|18422076|18422076|18422637|18422637|18422637|18422637|18422637|18422637|18422637|18422637|18422637 3R - 18420146 18420223 3'utr fru FlyBase G52350.1 ATTTTTAACGCTGTTTTGTTAAACAAAAATTTAAGAAATTTATCTATTATATGATGTGATAACTATAGTAAAACTAAA 38 18420172 0.651270559 12 30 348 0.840909091 1.568201724 0.045454545 0.105263158 0.227272727 38 7 0 37 3R:18420146-18420223 7 fru FBtr0083650|FBtr0083650|FBtr0083650|FBtr0083645|FBtr0083645|FBtr0083645|FBtr0083640|FBtr0083640|FBtr0083640|FBtr0330040|FBtr0330040|FBtr0330040 18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714 18422637|18422637|18422637|18422637|18422637|18422637|18422637|18422637|18422637|18422076|18422076|18422076 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 18420146 18420191 3'utr fru FlyBase G39531.1 AAGAAATTTATCTATTATATGATGTGATAACTATAGTAAAACTAAA 34 18420172 0.622556018 8 29 299 0.823529412 1.021189299 0 0.382352941 0.588235294 34 6 3 42 3R:18420146-18420191 7 32 3303 FBgn0004652 1186.113333 24.98 38.30666667 0.026978872 1.28102482 0.835363731 3 3 3 0.1 dme-miR-34-5p 6mer2-7 ACTGCC 3R 18420250 18420255 - 3R_18420250_18420255_- 0.494166755 0.846679536 0.670423146 0.249264121 fru FBtr0330040|FBtr0083640|FBtr0083650|FBtr0083645 18418714|18418714|18418714|18418714 18422076|18422637|18422637|18422637 3R - 18420241 18420272 3'utr fru FlyBase G52350.2 ATAATGCTACATCAAATACTGCCCCCGACTTA 24 18420256 0.806921699 4 18 118 0.8 1 0.08 0.041666667 0.08 24 4 1 20 3R:18420241-18420272 6 fru FBtr0083650|FBtr0083645|FBtr0083640|FBtr0330040 18418714|18418714|18418714|18418714 18422637|18422637|18422637|18422076 ACTGCC 6mer2-7 dme-miR-34-5p 3R - 18420238 18420311 3'utr fru FlyBase G39532.1 CTTAACATGAAATGTTTAGGAATTAAATTTACATTATTAATAATGCTACATCAAATACTGCCCCCGACTTAATG 19 18420256 0.98587592 9 15 121 0.741935484 1.361727836 0.290322581 0.421052632 0.64516129 19 8 0 23 3R:18420238-18420311 6 18.5 3304 FBgn0004652 1186.113333 24.98 38.30666667 0.01559716 0.740592474 0.482944657 1 1 1 0.1 dme-miR-12-5p 6mer2-7 ATACTC 3R 18421268 18421273 - 3R_18421268_18421273_- 0.999977301 0.999939345 0.999958323 2.69E-05 fru FBtr0330040|FBtr0083640|FBtr0083650|FBtr0083645 18418714|18418714|18418714|18418714 18422076|18422637|18422637|18422637 3R - 18421256 18421288 3'utr fru FlyBase G52355.1 CCGGAAACCACTCTGATACTCTATAGGAAATGA 19 18421275 0.73834928 3 18 90 0.956521739 1.342422681 0.260869565 0.210526316 0.347826087 19 1 0 22 3R:18421256-18421288 6 fru FBtr0083650|FBtr0083645|FBtr0083640|FBtr0330040 18418714|18418714|18418714|18418714 18422637|18422637|18422637|18422076 ATACTC 6mer2-7 dme-miR-12-5p 3R - 18421256 18421292 3'utr fru FlyBase G39535.1 CCACCCGGAAACCACTCTGATACTCTATAGGAAATGA 7 18421275 0.969082126 2 6 35 0.857142857 0.77815125 0.142857143 0 0 7 1 0 6 3R:18421256-18421292 6 12.5 3305 FBgn0004652 1186.113333 24.98 38.30666667 0.010538622 0.50040032 0.326313958 2 2 2 0.1 dme-miR-12-5p 7mer-A1 ATACTCA 3R 18422039 18422045 - 3R_18422039_18422045_- 0.823349165 0.823349165 0.823349165 0 fru FBtr0330040|FBtr0083640|FBtr0083650|FBtr0083645 18418714|18418714|18418714|18418714 18422076|18422637|18422637|18422637 3R - 18422015 18422075 3'utr fru FlyBase G52356.1 AACAGCAACAGCAGCAACAGCAACCAATTGATACTCAAAGCAAATGTAATTTAGACGAGAA 351 18422047 0.909494402 5 347 1100 0.990498812 2.620136055 0.042755344 0.179487179 0.315914489 351 4 0 417 3R:18422015-18422075 7 fru FBtr0083650|FBtr0083645|FBtr0083640|FBtr0330040 18418714|18418714|18418714|18418714 18422637|18422637|18422637|18422076 ATACTCA 7mer-A1 dme-miR-12-5p 3R - 18422022 18422072 3'utr fru FlyBase G39536.1 AGCAACAGCAGCAACAGCAACCAATTGATACTCAAAGCAAATGTAATTTAG 195 18422047 0.913703431 5 189 614 0.971061093 2.178976947 0.064308682 0.41025641 0.63022508 195 8 1 302 3R:18422022-18422072 7 271.5 3306 FBgn0004652 1186.113333 24.98 38.30666667 0.228898869 10.86869496 7.087539158 2 2 2 0.1 dme-miR-2a-2-5p 7mer-m1 GATGAGG 3R 18422332 18422338 - 3R_18422332_18422338_- 0.521363262 0.492364956 0.506864109 0.020504895 fru FBtr0083640|FBtr0083650|FBtr0083645 18418714|18418714|18418714 18422637|18422637|18422637 3R - 18422284 18422373 3'utr fru FlyBase G52358.1 GATGAGAGCGACAATGAGCTGGAGGAGGAGCAGCAGATGAGGCTGAGCTTTGAGCGGTACATGGAGCAGCTGAAGCAGCTGGCGCCCTAC 44 18422336 0.998854242 4 44 158 1 1.707570176 0.31372549 0.136363636 0.254901961 44 0 0 51 3R:18422284-18422373 7 fru FBtr0083650|FBtr0083645|FBtr0083640 18418714|18418714|18418714 18422637|18422637|18422637 GATGAGG 7mer-m1 dme-miR-2a-2-5p 3R - 18422316 18422360 3'utr fru FlyBase G39538.1 ATGAGCTGGAGGAGGAGCAGCAGATGAGGCTGAGCTTTGAGCGGT 18 18422336 0.982729511 2 18 68 1 1.431363764 0.259259259 0.388888889 0.592592593 18 0 0 27 3R:18422316-18422360 7 29.5 3307 FBgn0004652 1186.113333 24.98 38.30666667 0.024871148 1.180944756 0.77010094 -2 -2 -2 0.1 dme-miR-980-3p 8mer-A1 GGCAGCTA 3R 18431318 18431325 - 3R_18431318_18431325_- 0.66873433 0.668734336 0.668734333 0 fru FBtr0083647 18431231 18431446 3R - 18431303 18431350 5'utr fru FlyBase G52369.1 AATATATTTAGTAACCTAAGAACTTGGCAGCTACTATGAACAAAAGCA 119 18431326 0.83458356 6 115 727 0.95035461 1.826074803 0.014184397 0.168067227 0.29787234 119 6 1 134 3R:18431303-18431350 8 fru FBtr0083647 18431231 18431446 GGCAGCTA 8mer-A1 dme-miR-980-3p 3R - 18431303 18431350 5'utr fru FlyBase G39543.1 AATATATTTAGTAACCTAAGAACTTGGCAGCTACTATGAACAAAAGCA 63 18431326 0.819567414 6 61 363 0.968421053 1.963787827 0.063157895 0.333333333 0.557894737 63 3 0 92 3R:18431303-18431350 8 91 3308 FBgn0004652 1186.113333 24.98 38.30666667 0.076721168 3.642914331 2.375565611 1 1 1 0.1 dme-miR-92b-3p 8mer-A1 GTGCAATA 3R 18650739 18650746 - 3R_18650739_18650746_- 0.628855464 0.628916032 0.628885748 4.28E-05 CG31224 FBtr0344327|FBtr0083691|FBtr0344326 18650119|18650119|18650119 18651140|18651140|18651140 3R - 18650702 18650770 3'utr CG31224 FlyBase G52400.1 TAGTAAAATGTTATACCTAGTTCAGTGCAATATACATCGATTAAATACTATATGCCGCGATACTTTTTC 16 18650750 0.767806301 6 15 119 0.952380952 1.301029996 0.047619048 0.1875 0.380952381 16 1 0 20 3R:18650702-18650770 8 CG31224 FBtr0344326|FBtr0083691|FBtr0344327 18650119|18650119|18650119 18651140|18651140|18651140 GTGCAATA 8mer-A1 dme-miR-92b-3p 3R - 18650733 18650761 3'utr CG31224 FlyBase G39567.1 GTTATACCTAGTTCAGTGCAATATACATC 8 18650749 0.668143395 5 7 51 0.818181818 0.954242509 0.090909091 0.25 0.454545455 8 2 0 9 3R:18650733-18650761 8 9.5 3309 FBgn0051224 1247.72 20.83666667 31.93333333 0.007613888 0.455927052 0.297494781 4 3 3.5 0.1 dme-miR-7-5p 6mer2-7 TCTTCC 3R 18650839 18650844 - 3R_18650839_18650844_- 0.999361987 0.999935908 0.999648947 0.000405809 CG31224 FBtr0344327|FBtr0083691|FBtr0344326 18650119|18650119|18650119 18651140|18651140|18651140 3R - 18650782 18650875 3'utr CG31224 FlyBase G52401.1 ACGTAGCTAAATGTGAAAGTGTTCCCCATTCTCTTCCTCCGGATTCGAATCACAATTCGCGTCAACCGCTTTAATCCCGTTTAGGTTTTAGATT 22 18650842 0.985943217 9 21 182 0.958333333 1.361727836 0.291666667 0.090909091 0.166666667 22 1 0 23 3R:18650782-18650875 6 CG31224 FBtr0344326|FBtr0083691|FBtr0344327 18650119|18650119|18650119 18651140|18651140|18651140 TCTTCC 6mer2-7 dme-miR-7-5p 3R - 18650782 18650861 3'utr CG31224 FlyBase G39568.1 GAAAGTGTTCCCCATTCTCTTCCTCCGGATTCGAATCACAATTCGCGTCAACCGCTTTAATCCCGTTTAGGTTTTAGATT 10 18650844 0.982479117 8 10 79 1 1.146128036 0.071428571 0.3 0.5 10 0 0 14 3R:18650782-18650861 6 10 3310 FBgn0051224 1247.72 20.83666667 31.93333333 0.008014619 0.479923212 0.313152401 -2 0 -1 0.1 dme-miR-8-3p 7mer-A1 AGTATTA 3R 18650998 18651004 - 3R_18650998_18651004_- 0.823343013 0.823332473 0.823337743 7.42E-06 CG31224 FBtr0344327|FBtr0083691|FBtr0344326 18650119|18650119|18650119 18651140|18651140|18651140 3R - 18650947 18651095 3'utr CG31224 FlyBase G52402.1 ATATAATCATTACCTAGGTAGTTGTTCATGACTCTTCTATGTGTGTACTGTGTGTGTCTGTGGTTAAAACAACAAAACAAAACAACAAATTAGTATTACCTATCGAACTATATATTTAGTTAACATATGCGATTGCCAATTCTTGTTGA 51 18651006 0.953493428 21 45 417 0.9 1.73239376 0.1 0.156862745 0.283333333 51 6 0 54 3R:18650947-18651095 7 CG31224 FBtr0344326|FBtr0083691|FBtr0344327 18650119|18650119|18650119 18651140|18651140|18651140 AGTATTA 7mer-A1 dme-miR-8-3p 3R - 18650933 18651093 3'utr CG31224 FlyBase G39569.1 ATAATCATTACCTAGGTAGTTGTTCATGACTCTTCTATGTGTGTACTGTGTGTGTCTGTGGTTAAAACAACAAAACAAAACAACAAATTAGTATTACCTATCGAACTATATATTTAGTTAACATATGCGATTGCCAATTCTTGTTGATTAAACCAACAAGA 27 18651006 0.987107022 18 25 229 0.953488372 1.612783857 0.069767442 0.37037037 0.604651163 27 2 0 41 3R:18650933-18651093 7 9 3311 FBgn0051224 1247.72 20.83666667 31.93333333 0.007213157 0.431930891 0.281837161 2 2 2 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 18665277 18665283 + 3R_18665277_18665283_+ 0.801970437 0.801970433 0.801970435 0 Gos28 FBtr0083661|FBtr0083661|FBtr0083661 18665169|18665169|18665169 18665307|18665307|18665307 3R + 18665237 18665301 3'utr Gos28 FlyBase G43803.1 TTAGTTTGTTTTTTCCGACGGTATATGTGTATGATTAACTTGTGATAGCAATAAAATGTACTATA 67 18665274 0.66452229 13 61 524 0.898734177 1.374137094 0.063291139 0.164179104 0.291139241 67 6 2 71 3R:18665237-18665301 7 Gos28 FBtr0083661|FBtr0083661|FBtr0083661 18665169|18665169|18665169 18665307|18665307|18665307 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 18665251 18665302 3'utr Gos28 FlyBase G33101.1 CCGACGGTATATGTGTATGATTAACTTGTGATAGCAATAAAATGTACTATAT 32 18665276 0.671890215 8 28 253 0.888888889 0.903089987 0 0.34375 0.533333333 32 1 4 40 3R:18665251-18665302 7 44.5 3312 FBgn0044871 146.6666667 20.69333333 31.63666667 0.303409091 2.150451031 1.406595722 3 1 2 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 18674633 18674640 + 3R_18674633_18674640_+ 0.500120318 0.500120308 0.500120313 0 CG7702 FBtr0083665|FBtr0083664 18674410|18674410 18674679|18674679 3R + 18674606 18674648 3'utr CG7702 FlyBase G43809.1 TAGTGAAGCCATCGATGTTTGTGTATTGTACTTAAGATCCGCA 9 18674632 0.961283387 6 9 82 1 1.041392685 0.090909091 0.111111111 0.272727273 9 0 0 11 3R:18674606-18674648 8 CG7702 FBtr0083665|FBtr0083664 18674410|18674410 18674679|18674679 GTACTTAA 8mer-A1 dme-miR-252-5p 3R + 18674610 18674648 3'utr CG7702 FlyBase G33103.1 GAAGCCATCGATGTTTGTGTATTGTACTTAAGATCCGCA 6 18674632 0.988110251 3 5 56 1 1 0 0.333333333 0.6 6 0 0 10 3R:18674610-18674648 8 6.5 3313 FBgn0038638 520.81 26.77666667 41.05 0.012480559 0.242748662 0.158343484 1 1 1 0.1 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 18759343 18759350 - 3R_18759343_18759350_- 0.383043503 0.381770578 0.38240704 0.000900076 CG7720 FBtr0083679|FBtr0301200|FBtr0301199|FBtr0339167|FBtr0301201|FBtr0083678 18759234|18759234|18759234|18759234|18759234|18759234 18759467|18759467|18759467|18759467|18759467|18759467 3R - 18759261 18759378 3'utr CG7720 FlyBase G52513.1 AGCCAAGTGTTTCATGTCTATAAAGATGCTGTGATTTTCTGTGCGCGACTGTTGTTGAGCAATTGCTCGCGCATTTCATTCGCATGTACTTAACGCATATGTGTGTGCGTGTCAGCAT 93 18759352 0.858397016 14 89 865 0.964285714 2.033423755 0.080357143 0.193548387 0.330357143 93 4 0 108 3R:18759261-18759378 8 CG7720 FBtr0301201|FBtr0083678|FBtr0301199|FBtr0339167|FBtr0083679|FBtr0301200 18759234|18759234|18759234|18759234|18759234|18759234 18759467|18759467|18759467|18759467|18759467|18759467 CTGTGATT 8mer-m1 dme-miR-308-3p 3R - 18759324 18759374 3'utr CG7720 FlyBase G39641.1 AAGTGTTTCATGTCTATAAAGATGCTGTGATTTTCTGTGCGCGACTGTTGT 69 18759352 0.867694423 8 68 678 0.981981982 2.037426498 0.081081081 0.376811594 0.612612613 69 2 0 109 3R:18759324-18759374 8 72.5 3314 FBgn0038652 105.2733333 4.686666667 7.096666667 0.688683427 15.46941679 10.21606388 2 2 2 0.1 dme-miR-2b-2-5p 6mer2-7 TGAAGA 3R 18908444 18908449 + 3R_18908444_18908449_+ 0.98503898 0.986012105 0.985525543 0.000688086 EndoA FBtr0083698|FBtr0334522|FBtr0083699 18908375|18908375|18908375 18910348|18910755|18910348 3R + 18908381 18908466 3'utr EndoA FlyBase G43823.1 TTCCTCATCCTGTTCCTCGTATTAATCCCGATCCCTAAACCAATCCCATCCTATCAAACTGGCTGAAGACGTACGTAGATCGCTGA 107 18908440 0.945543786 5 104 439 0.976 2.086359831 0.464 0.130841121 0.256 107 3 0 122 3R:18908381-18908466 6 EndoA FBtr0083699|FBtr0334522|FBtr0083698 18908375|18908375|18908375 18910348|18910755|18910348 TGAAGA 6mer2-7 dme-miR-2b-2-5p 3R + 18908422 18908496 3'utr EndoA FlyBase G33113.1 AATCCCATCCTATCAAACTGGCTGAAGACGTACGTAGATCGCTGATTGGAGAACAATAACCTTAATTGTTGGTTT 56 18908440 0.936496784 5 56 218 1 1.977723605 0.368421053 0.482142857 0.694736842 56 0 0 95 3R:18908422-18908496 6 78 3315 FBgn0038659 593.6566667 19.89333333 30.41666667 0.131389074 3.920911528 2.564383562 4 4 4 0.1 dme-miR-33-5p 6mer3-8 CAATGC 3R 18909107 18909112 + 3R_18909107_18909112_+ 1 0.99998695 0.999993475 9.26E-06 EndoA FBtr0083698|FBtr0334522|FBtr0083699 18908375|18908375|18908375 18910348|18910755|18910348 3R + 18909097 18909136 3'utr EndoA FlyBase G43825.1 CAACCTACGCCAATGCGCTCTCTATGCAAATGTCCCTTTA 6 18909112 0.976850932 4 5 36 1 0.77815125 0 0 0 6 0 0 6 3R:18909097-18909136 6 EndoA FBtr0083699|FBtr0334522|FBtr0083698 18908375|18908375|18908375 18910348|18910755|18910348 CAATGC 6mer3-8 dme-miR-33-5p 3R + 18909097 18909134 3'utr EndoA FlyBase G33116.1 CAACCTACGCCAATGCGCTCTCTATGCAAATGTCCCTT 6 18909110 0.972798488 3 5 33 1 1 0.2 0.5 0.7 6 0 0 10 3R:18909097-18909134 6 4 3316 FBgn0038659 593.6566667 19.89333333 30.41666667 0.006737901 0.201072386 0.131506849 -5 -3 -4 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 18926553 18926558 + 3R_18926553_18926558_+ 0.998952653 0.999999974 0.999476313 0.000740553 Xrp1 FBtr0083700|FBtr0083702|FBtr0083703|FBtr0113246|FBtr0334523|FBtr0083701|FBtr0334524 18926503|18926503|18926503|18926503|18926503|18926503|18926503 18926849|18926849|18926849|18926849|18926849|18926849|18926989 3R + 18926323 18926713 stop_codon Xrp1 FlyBase G43845.1 CGCGCCGGAAGACGAAGGTGCGCGAAGAGGAGGAGAAGCGCGCCGAGGACACGCTATTGGCCGAGAATCTGCGACTGCGTGCCCGGGCCGACGAAGTGGCCTCCCGGGAACGGAAGTTCAAGAAGTACCTGATGGAGCGCCAGCGGCAGAAGAGCACTTACGTTAAGCAGGAGCAGGACTGAGATTCTCGTAGCCATAGAATAGAAATTGCGGAGCATAAGCCTGTCATAGTACCTATCGTCGTCATCCAATTGTTTAGTTAGTTAAGTTGTCGTTGAAGAAGTCGAGAAGCAGAAATCAAATTTCCATTTCCATGTGGACATCAGTTAAGCCACTTATTAGGCATAGTGATGGCGCCCATAGTGCGCGAGGAGTGTTTAACTTTAATTTT 441 18926540 0.974094915 57 399 2448 0.900191939 1.893021592 0.230326296 0.163265306 0.291746641 441 47 5 469 3R:18926323-18926713 6 Xrp1 FBtr0113246|FBtr0334523|FBtr0083701|FBtr0334524|FBtr0083700|FBtr0083702|FBtr0083703 18926503|18926503|18926503|18926503|18926503|18926503|18926503 18926849|18926849|18926849|18926989|18926849|18926849|18926849 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 18926424 18926572 stop_codon Xrp1 FlyBase G33136.2 TCCCGGGAACGGAAGTTCAAGAAGTACCTGATGGAGCGCCAGCGGCAGAAGAGCACTTACGTTAAGCAGGAGCAGGACTGAGATTCTCGTAGCCATAGAATAGAAATTGCGGAGCATAAGCCTGTCATAGTACCTATCGTCGTCATCCA 214 18926540 0.982234872 23 188 1019 0.890965732 2.456366033 0.230529595 0.35046729 0.566978193 214 35 0 286 3R:18926424-18926572 6 127 3317 FBgn0261113 7206.666667 268.3933333 411.66 0.017622572 0.47318612 0.30850702 13 13 13 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3R 18926772 18926777 + 3R_18926772_18926777_+ 0.855254524 0.854280141 0.854767332 0.000689005 Xrp1 FBtr0083700|FBtr0083702|FBtr0083703|FBtr0113246|FBtr0334523|FBtr0083701|FBtr0334524 18926503|18926503|18926503|18926503|18926503|18926503|18926503 18926849|18926849|18926849|18926849|18926849|18926849|18926989 3R + 18926732 18926791 3'utr Xrp1 FlyBase G43846.1 AAAACTAAAAAATTTTTATACCCACGGATATGTTTTTCGTCCAAAGCGTAATCAAAAAAA 326 18926766 0.639297498 9 316 2581 0.968831169 1.872738827 0.376623377 0.159509202 0.288311688 326 8 4 373 3R:18926732-18926791 6 Xrp1 FBtr0113246|FBtr0334523|FBtr0083701|FBtr0334524|FBtr0083700|FBtr0083702|FBtr0083703 18926503|18926503|18926503|18926503|18926503|18926503|18926503 18926849|18926849|18926849|18926989|18926849|18926849|18926849 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 18926738 18926792 3'utr Xrp1 FlyBase G33137.1 AAAAAATTTTTATACCCACGGATATGTTTTTCGTCCAAAGCGTAATCAAAAAAAA 187 18926766 0.63721212 7 181 1451 0.964157706 1.952631025 0.379928315 0.342245989 0.559139785 187 8 2 269 3R:18926738-18926792 6 251.5 3318 FBgn0261113 7206.666667 268.3933333 411.66 0.034898242 0.937057552 0.610941068 6 6 6 0.1 dme-miR-14-3p 6mer3-8 AAGACT 3R 19045871 19045876 - 3R_19045871_19045876_- 1 0.999996966 0.999998483 2.12E-06 cdi FBtr0305321|FBtr0083716 19044880|19045692 19047703|19046616 3R - 19045842 19045913 3'utr cdi FlyBase G52542.1 TTTAAATAATTACATAGACTTACCGACTTGAGGTTTTAAGACTTAAAGCCCCCTTTCCCTCGAAAATTGTAC 59 19045878 0.704452325 10 55 400 0.940298507 1.799340549 0.089552239 0.118644068 0.223880597 59 4 0 63 3R:19045842-19045913 6 cdi FBtr0305321|FBtr0083716 19044880|19045692 19047703|19046616 AAGACT 6mer3-8 dme-miR-14-3p 3R - 19045821 19045912 3'utr cdi FlyBase G39657.2 TTAAATAATTACATAGACTTACCGACTTGAGGTTTTAAGACTTAAAGCCCCCTTTCCCTCGAAAATTGTACAGATGATCCCGGATCGATTTG 32 19045859 0.771551338 12 28 179 0.906976744 1.591064607 0.069767442 0.21875 0.418604651 32 4 0 39 3R:19045821-19045912 6 26 3319 FBgn0004876 813.04 17.12 26.29666667 0.031978746 1.518691589 0.988718469 2 -17 -7.5 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 19046594 19046599 - 3R_19046594_19046599_- 0.885230777 0.893738265 0.889484521 0.006015711 cdi FBtr0305321|FBtr0083716 19044880|19045692 19047703|19046616 3R - 19046407 19046627 stop_codon cdi FlyBase G52545.1 AAGGCGGCTAGCTGTGGTGGGGACCTTGTGATGAAAACCCCGACCTGATTCATATTTAATAACTTATTTCTTCGATTCTTTGAGATTTTTATCCCCATACACGATTCCTTTATACCTGGCAGTACCACTTGATAAAAATACAAAAAATAATCGCAAATAATTTTGCCCACAAAAGTTGGTTAGTTTACGATGCCTAAAGGTTTAATTTGTAAGTAAATAGT 51 19046601 0.980927444 23 48 360 0.938461538 1.183269844 0.2 0.235294118 0.4 51 1 3 61 3R:19046407-19046627 6 cdi FBtr0305321|FBtr0083716 19044880|19045692 19047703|19046616 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R - 19046502 19046626 stop_codon cdi FlyBase G39660.1 AGGCGGCTAGCTGTGGTGGGGACCTTGTGATGAAAACCCCGACCTGATTCATATTTAATAACTTATTTCTTCGATTCTTTGAGATTTTTATCCCCATACACGATTCCTTTATACCTGGCAGTACC 32 19046602 0.823727324 13 31 227 0.978723404 1.662757832 0.404255319 0.34375 0.553191489 32 1 0 46 3R:19046502-19046626 6 14.5 3320 FBgn0004876 813.04 17.12 26.29666667 0.017834301 0.846962617 0.551400684 2 3 2.5 0.1 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 19139080 19139087 - 3R_19139080_19139087_- 0.625364009 0.625364009 0.625364009 0 Ppcs FBtr0083752|FBtr0330044 19139052|19139052 19141595|19141415 3R - 19139068 19139108 3'utr Ppcs FlyBase G52566.1 TGTATTAAACTGGAAATGAAATAGCTTTAAATGTATAGACA 6 19139088 0.869527985 3 6 46 1 0.77815125 0.166666667 0 0 6 0 0 6 3R:19139068-19139108 8 Ppcs FBtr0083752|FBtr0330044 19139052|19139052 19141595|19141415 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R - 19139069 19139109 3'utr Ppcs FlyBase G39679.1 GTGTATTAAACTGGAAATGAAATAGCTTTAAATGTATAGAC 5 19139087 0.980026608 4 4 29 0.777777778 0.84509804 0.333333333 0.8 0.888888889 5 2 0 7 3R:19139069-19139109 8 5 3321 FBgn0261285 111.1666667 3.44 5.32 0.044977511 1.453488372 0.939849624 1 0 0.5 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 19139918 19139924 - 3R_19139918_19139924_- 0.658980182 0.658976338 0.65897826 2.76E-06 Ppcs FBtr0083752|FBtr0330044 19139052|19139052 19141595|19141415 3R - 19139896 19139955 3'utr Ppcs FlyBase G52569.1 ATGTATAACTAGCCAAGTGTGCGAACAAGATGGCAGCTGCGAATGGATGGTATTTGCTTT 256 19139925 0.97985026 6 252 649 0.987341772 2.494154594 0.607594937 0.19140625 0.344936709 256 4 0 312 3R:19139896-19139955 7 Ppcs FBtr0083752|FBtr0330044 19139052|19139052 19141595|19141415 GGCAGCT 7mer-m8 dme-miR-980-3p 3R - 19139888 19139950 3'utr Ppcs FlyBase G39680.1 TAACTAGCCAAGTGTGCGAACAAGATGGCAGCTGCGAATGGATGGTATTTGCTTTTACTGGCA 201 19139925 0.983077454 7 199 451 0.993846154 2.509202522 0.593846154 0.437810945 0.652307692 201 2 0 323 3R:19139888-19139950 7 226 3322 FBgn0261285 111.1666667 3.44 5.32 2.032983508 65.69767442 42.48120301 1 1 1 0.1 dme-miR-184-3p 7mer-m8 TCCGTCC 3R 19140425 19140431 - 3R_19140425_19140431_- 0.661591036 0.661590551 0.661590794 2.83E-07 Ppcs FBtr0083752|FBtr0330044 19139052|19139052 19141595|19141415 3R - 19140406 19140492 3'utr Ppcs FlyBase G52570.1 GAACCTCTGGCGAAGGGTTGGCGGTGGATTTGTATCCTCCTTTCATGGAGTTGTAACCACTTCCGTCCCGCCCGCATTTGTGGTTTA 276 19140432 0.817876031 7 274 1467 0.993650794 2.194514342 0.225396825 0.123188406 0.231746032 276 1 1 313 3R:19140406-19140492 7 Ppcs FBtr0083752|FBtr0330044 19139052|19139052 19141595|19141415 TCCGTCC 7mer-m8 dme-miR-184-3p 3R - 19140406 19140458 3'utr Ppcs FlyBase G39681.1 TCCTCCTTTCATGGAGTTGTAACCACTTCCGTCCCGCCCGCATTTGTGGTTTA 123 19140432 0.809536684 4 121 637 0.988304094 2.227886705 0.18128655 0.276422764 0.479532164 123 2 0 169 3R:19140406-19140458 7 196.5 3323 FBgn0261285 111.1666667 3.44 5.32 1.767616192 57.12209302 36.93609023 1 1 1 0.1 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3R 19140901 19140907 - 3R_19140901_19140907_- 0.437319738 0.607623667 0.522471702 0.120423113 Ppcs FBtr0083752|FBtr0330044 19139052|19139052 19141595|19141415 3R - 19140880 19140961 3'utr Ppcs FlyBase G52572.1 TAGCGACAGAGTGCATGCAATCGCAATTTGCCGGACGTTGTGTCCCTGGACAACTGGTGCTGTGTGTCAGTGGCAGGCGACG 10 19140905 0.977463626 8 10 65 1 1.041392685 0.181818182 0.1 0.181818182 10 0 0 11 3R:19140880-19140961 7 Ppcs FBtr0083752|FBtr0330044 19139052|19139052 19141595|19141415 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3R - 19140896 19140934 3'utr Ppcs FlyBase G39682.1 TTGCCGGACGTTGTGTCCCTGGACAACTGGTGCTGTGTG 5 19140904 0.918301843 4 5 35 1 0.84509804 0.428571429 0.2 0.428571429 5 0 0 7 3R:19140896-19140934 7 5 3324 FBgn0261285 111.1666667 3.44 5.32 0.044977511 1.453488372 0.939849624 -2 -3 -2.5 0.1 dme-miR-276a-3p 6mer3-8 AGTTCC 3R 19141331 19141336 - 3R_19141331_19141336_- 0.999999786 0.999999355 0.99999957 2.83E-07 Ppcs FBtr0347007|FBtr0083752|FBtr0330044 19140994|19139052|19139052 19141595|19141595|19141415 3R - 19141181 19141363 3'utr Ppcs FlyBase G52573.1 TCGATTCATCCTTGCCCTTGGACTTTGAGTTCCCGCCACAATTTAGCTATCTATTTATGGTCGCGCCTCATAATTGAGGTGGCACCGCTCCATTAGTCCATTATCCTGTTGTTATTATTATTTTGGTATTAGTTAATGTATTGGCCCTATTGTTGTCCTGAGAAATGATGTCACTTGTATGTA 90 19141334 0.823114811 24 87 740 0.953703704 1.711807229 0.175925926 0.144444444 0.287037037 90 4 1 103 3R:19141181-19141363 6 Ppcs FBtr0347007|FBtr0083752|FBtr0330044 19140994|19139052|19139052 19141595|19141595|19141415 AGTTCC 6mer3-8 dme-miR-276a-3p 3R - 19141253 19141359 3'utr Ppcs FlyBase G39684.1 TTCATCCTTGCCCTTGGACTTTGAGTTCCCGCCACAATTTAGCTATCTATTTATGGTCGCGCCTCATAATTGAGGTGGCACCGCTCCATTAGTCCATTATCCTGTTG 46 19141334 0.799076176 15 44 355 0.971428571 1.531478917 0.085714286 0.391304348 0.6 46 1 1 68 3R:19141253-19141359 6 45.5 3325 FBgn0261285 111.1666667 3.44 5.32 0.409295352 13.22674419 8.552631579 -2 -2 -2 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 19148727 19148734 - 3R_19148727_19148734_- 0.64718648 0.637808605 0.642497543 0.006631177 CG5835 FBtr0083751|FBtr0083751|FBtr0083751 19148630|19148630|19148630 19149037|19149037|19149037 3R - 19148654 19148757 3'utr CG5835 FlyBase G52579.1 AAGACCAATTAGTTAGTAAGTTTCTGTGATATTGTTCTAGAGATTCTTTTGTACGTCCTTGCACTAACAATACGCATAGAACCCACGTTGCTAATCGATAATAA 65 19148735 0.993584955 20 60 743 0.950617284 1.58546073 0.061728395 0.2 0.358024691 65 3 1 77 3R:19148654-19148757 8 CG5835 FBtr0083751|FBtr0083751|FBtr0083751 19148630|19148630|19148630 19149037|19149037|19149037 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 19148691 19148755 3'utr CG5835 FlyBase G39688.1 GACCAATTAGTTAGTAAGTTTCTGTGATATTGTTCTAGAGATTCTTTTGTACGTCCTTGCACTAA 47 19148735 0.660163736 11 42 567 0.893333333 1.348953548 0.093333333 0.468085106 0.666666667 47 6 2 67 3R:19148691-19148755 8 50.5 3326 FBgn0038682 101.3333333 9.206666667 14.04333333 0.498355263 5.485155684 3.596012343 1 1 1 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 3R 19154505 19154510 - 3R_19154505_19154510_- 0.999999997 0.999999943 0.99999997 7.07E-08 CG11779 FBtr0083750|FBtr0335020|FBtr0083749 19154095|19154095|19154403 19155132|19155132|19155132 3R - 19154487 19154545 3'utr CG11779 FlyBase G52582.1 ATGGAATTCGCTCAGGGCGGCTTGGGCATCGTAAATTGACTGTACACACAGAATCCAAA 7 19154509 0.980416204 4 6 42 0.888888889 0.602059991 0.444444444 0.285714286 0.444444444 7 0 1 8 3R:19154487-19154545 6 CG11779 FBtr0083749|FBtr0335020|FBtr0083750 19154403|19154095|19154095 19155132|19155132|19155132 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 19154494 19154522 3'utr CG11779 FlyBase G39690.1 GGGCATCGTAAATTGACTGTACACACAGA 6 19154503 0.903547297 3 6 29 1 1.079181246 0.666666667 0.5 0.75 6 0 0 12 3R:19154494-19154522 6 5.5 3327 FBgn0038683 227.2933333 11.68666667 17.73333333 0.024197806 0.470621791 0.310150376 -1 -7 -4 0.1 dme-miR-79-3p 6mer3-8 TAGCTT 3R 19169868 19169873 + 3R_19169868_19169873_+ 0.999981681 0.999969805 0.999975743 8.41E-06 sqz FBtr0083733 19169821 19170576 3R + 19169811 19169917 stop_codon sqz FlyBase G43908.1 AAGGCGCAATAGTACAGGCCGTCAGGTCGGGGCCAAAAGAGGCAGCAACGATGACATTAGCTTAGGATCAACGTTTAAGTTGGTATGGATACAAGAGCGTGGTATTT 75 19169867 0.929515235 12 67 334 0.903225806 1.447158031 0.096774194 0.226666667 0.376344086 75 7 2 84 3R:19169811-19169917 6 sqz FBtr0083733 19169821 19170576 TAGCTT 6mer3-8 dme-miR-79-3p 3R + 19169812 19169886 stop_codon sqz FlyBase G33183.1 AGGCGCAATAGTACAGGCCGTCAGGTCGGGGCCAAAAGAGGCAGCAACGATGACATTAGCTTAGGATCAACGTTT 42 19169867 0.962060558 6 33 162 0.786666667 1.469822016 0.026666667 0.5 0.72 42 15 1 59 3R:19169812-19169886 6 40 3328 FBgn0010768 210.2766667 7.726666667 11.73666667 0.190225576 5.176876618 3.408122692 1 1 1 0.1 dme-miR-34-5p 7mer-m8 CACTGCC 3R 19170090 19170096 + 3R_19170090_19170096_+ 0.708944717 0.70894408 0.708944398 4.24E-07 sqz FBtr0083733 19169821 19170576 3R + 19170077 19170226 3'utr sqz FlyBase G43909.1 AAATCAACTCCATCACTGCCCAAAACCAATAAGAAAATCAACTGCAATCCTACAGTTTCTGTGCTATTTTCAACTGCCATATGAAAGTAATATGTAATATCTAGATCAACTCAGGATTTTAAATACGATAATTATGCACACTTTTAGATA 321 19170089 0.807926662 22 304 1125 0.95 1.579783597 0.04 0.193146417 0.3525 321 11 9 380 3R:19170077-19170226 7 sqz FBtr0083733 19169821 19170576 CACTGCC 7mer-m8 dme-miR-34-5p 3R + 19170077 19170110 3'utr sqz FlyBase G33184.1 AAATCAACTCCATCACTGCCCAAAACCAATAAGA 155 19170089 0.796445737 3 140 378 0.916666667 1.597695186 0.00462963 0.324675325 0.518518519 154 14 4 198 3R:19170077-19170110 7 206.5 3329 FBgn0010768 210.2766667 7.726666667 11.73666667 0.982039535 26.72562554 17.5944334 1 1 1 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3R 19178150 19178156 - 3R_19178150_19178156_- 0.443131018 0.443131017 0.443131017 0 CG5555 FBtr0083746|FBtr0332165 19178083|19178083 19178257|19178257 3R - 19178093 19178177 3'utr CG5555 FlyBase G52594.1 AAGGTTTATAACAGCTCTATATGTGATTTCCTTTGTATAACGAAAACCTAAGGATTAAATATAACTACTACTACGTAGAAAACCA 142 19178150 0.98510694 12 137 1194 0.962765957 1.78055732 0.053191489 0.253521127 0.436170213 142 5 2 181 3R:19178093-19178177 7 CG5555 FBtr0083746|FBtr0332165 19178083|19178083 19178257|19178257 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 19178106 19178177 3'utr CG5555 FlyBase G39700.1 AAGGTTTATAACAGCTCTATATGTGATTTCCTTTGTATAACGAAAACCTAAGGATTAAATATAACTACTACT 114 19178150 0.860162087 13 107 926 0.936781609 1.73506635 0.040229885 0.385964912 0.597701149 114 9 2 163 3R:19178106-19178177 7 94.5 3330 FBgn0038686 438.3333333 26.99 41.29333333 0.215589354 3.501296777 2.288505005 -6 -6 -6 0.1 dme-miR-317-3p 7mer-A1 GTGTTCA 3R 19405089 19405095 + 3R_19405089_19405095_+ 0.823349248 0.823289787 0.823319517 4.20E-05 CG5316 FBtr0083759 19404158 19406294 3R + 19405063 19405101 3'utr CG5316 FlyBase G43918.1 CTTTCAAATTGCGTATATGATGCTCAGTGTTCAGGGATC 11 19405080 0.814293571 3 9 80 0.846153846 1.041392685 0.384615385 0.181818182 0.307692308 11 2 0 11 3R:19405063-19405101 7 CG5316 FBtr0083759 19404158 19406294 GTGTTCA 7mer-A1 dme-miR-317-3p 3R + 19405069 19405103 3'utr CG5316 FlyBase G33193.1 AATTGCGTATATGATGCTCAGTGTTCAGGGATCCA 7 19405080 0.815865428 3 7 53 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 3R:19405069-19405103 7 9 3331 FBgn0038704 1029.49 52.37666667 80.40666667 0.008742193 0.171832241 0.111931017 9 9 9 0.1 dme-miR-2a-2-5p 7mer-m1 GATGAGG 3R 19405301 19405307 + 3R_19405301_19405307_+ 0.825488211 0.822330837 0.823909524 0.002232619 CG5316 FBtr0083759 19404158 19406294 3R + 19405273 19405317 3'utr CG5316 FlyBase G43919.1 AATCCAAATGATATCTGAGACCAAACTGGATGAGGCAGAGGCAAA 11 19405303 0.921496364 3 11 21 1 1.041392685 0.363636364 0 0 11 0 0 11 3R:19405273-19405317 7 CG5316 FBtr0083759 19404158 19406294 GATGAGG 7mer-m1 dme-miR-2a-2-5p 3R + 19405272 19405318 3'utr CG5316 FlyBase G33194.1 TAATCCAAATGATATCTGAGACCAAACTGGATGAGGCAGAGGCAAAG 11 19405303 0.918799379 3 10 35 0.888888889 1.204119983 0.611111111 0.363636364 0.611111111 11 2 0 16 3R:19405272-19405318 7 8.5 3332 FBgn0038704 1029.49 52.37666667 80.40666667 0.008256515 0.162286005 0.105712627 -2 -2 -2 0.1 dme-miR-14-3p 6mer3-8 AAGACT 3R 19406069 19406074 + 3R_19406069_19406074_+ 0.852082102 0.999283944 0.925683023 0.104087391 CG5316 FBtr0306251|FBtr0083759|FBtr0083758|FBtr0083760 19406001|19404158|19406001|19406001 19406294|19406294|19406294|19406294 3R + 19406024 19406111 3'utr CG5316 FlyBase G43923.1 AATTCCTAATTCCAAATTCCCAACAGCAGTTGGTAAACTACCAGAAAGACTTTAGATCCACACAAATCGTTCCCAAATTGGCATTTTG 29 19406076 0.799782392 7 29 151 1 1.544068044 0.285714286 0.172413793 0.314285714 29 0 0 35 3R:19406024-19406111 6 CG5316 FBtr0083758|FBtr0083760|FBtr0306251|FBtr0083759 19406001|19406001|19406001|19404158 19406294|19406294|19406294|19406294 AAGACT 6mer3-8 dme-miR-14-3p 3R + 19406024 19406111 3'utr CG5316 FlyBase G33197.1 AATTCCTAATTCCAAATTCCCAACAGCAGTTGGTAAACTACCAGAAAGACTTTAGATCCACACAAATCGTTCCCAAATTGGCATTTTG 20 19406076 0.976174764 8 16 105 0.8 0.903089987 0.133333333 0.45 0.633333333 20 4 2 24 3R:19406024-19406111 6 20 3333 FBgn0038704 1029.49 52.37666667 80.40666667 0.019427095 0.381849424 0.248735594 -7 -7 -7 0.1 dme-miR-14-3p 6mer2-7 AGACTG 3R 19606384 19606389 + 3R_19606384_19606389_+ 0.999963664 0.999999613 0.999981639 2.54E-05 CG7342 FBtr0304745|FBtr0083777 19606277|19606277 19606475|19606475 3R + 19606362 19606408 3'utr CG7342 FlyBase G43952.1 ACAAGCAGCGGTATCAAAAATTAGACTGTATTTGTAGAATAAGTTTT 19 19606382 0.878180842 3 17 170 0.9 1.255272505 0.35 0.052631579 0.1 19 2 0 18 3R:19606362-19606408 6 CG7342 FBtr0304745|FBtr0083777 19606277|19606277 19606475|19606475 AGACTG 6mer2-7 dme-miR-14-3p 3R + 19606351 19606406 3'utr CG7342 FlyBase G33211.1 TATTTTGTAGTACAAGCAGCGGTATCAAAAATTAGACTGTATTTGTAGAATAAGTT 10 19606382 0.988301512 3 10 90 1 1.079181246 0.083333333 0.1 0.25 10 0 0 12 3R:19606351-19606406 6 13.5 3334 FBgn0038716 2 0.116666667 0.186666667 6.75 115.7142857 72.32142857 2 2 2 0.1 dme-miR-184-5p 6mer3-8 TGATAA 3R 19616141 19616146 - 3R_19616141_19616146_- 0.999757624 0.575365289 0.787561457 0.300090673 CG6231 FBtr0083807|FBtr0083809|FBtr0083810|FBtr0334923|FBtr0334924|FBtr0083808 19616022|19616022|19616022|19616022|19616022|19616022 19616637|19616637|19616637|19616637|19616637|19616637 3R - 19616122 19616191 3'utr CG6231 FlyBase G52640.1 ATTTTGGAGTTTGATCTTTAAGCAAATGAGAGCCATTAAGCAAACTGATAATAATTATTTAAAGTTAGAG 16 19616156 0.751770983 7 15 97 0.958333333 1.06069784 0.166666667 0.375 0.583333333 16 0 1 23 3R:19616122-19616191 6 CG6231 FBtr0334924|FBtr0083808|FBtr0083810|FBtr0334923|FBtr0083807|FBtr0083809 19616022|19616022|19616022|19616022|19616022|19616022 19616637|19616637|19616637|19616637|19616637|19616637 TGATAA 6mer3-8 dme-miR-184-5p 3R - 19616133 19616188 3'utr CG6231 FlyBase G39728.1 TTGGAGTTTGATCTTTAAGCAAATGAGAGCCATTAAGCAAACTGATAATAATTATT 14 19616156 0.69552903 7 12 80 0.875 0.84509804 0.0625 0.142857143 0.25 14 1 1 14 3R:19616133-19616188 6 10.5 3335 FBgn0038720 426.3333333 16.67 25.63 0.024628616 0.629874025 0.409676161 10 10 10 0.1 dme-miR-184-3p 6mer2-7 CCGTCC 3R 19616621 19616626 - 3R_19616621_19616626_- 0.970813666 0.847305733 0.909059699 0.087333344 CG6231 FBtr0083807|FBtr0083809|FBtr0083810|FBtr0334923|FBtr0334924|FBtr0083808 19616022|19616022|19616022|19616022|19616022|19616022 19616637|19616637|19616637|19616637|19616637|19616637 3R - 19616579 19616643 stop_codon CG6231 FlyBase G52643.1 CACTGAGGGGCGCCACCCCGTCCTAGTAGTTCGTAGTTTAGCTAACCAATTTCGCCTAGATCCTA 19 19616620 0.974149827 5 18 108 0.956521739 1.342422681 0.52173913 0.157894737 0.304347826 19 1 0 22 3R:19616579-19616643 6 CG6231 FBtr0334924|FBtr0083808|FBtr0083810|FBtr0334923|FBtr0083807|FBtr0083809 19616022|19616022|19616022|19616022|19616022|19616022 19616637|19616637|19616637|19616637|19616637|19616637 CCGTCC 6mer2-7 dme-miR-184-3p 3R - 19616585 19616642 stop_codon CG6231 FlyBase G39731.1 ACTGAGGGGCGCCACCCCGTCCTAGTAGTTCGTAGTTTAGCTAACCAATTTCGCCTAG 13 19616620 0.970105622 3 12 72 1 1.278753601 0.526315789 0.461538462 0.631578947 13 0 0 19 3R:19616585-19616642 6 13 3336 FBgn0038720 426.3333333 16.67 25.63 0.030492572 0.779844031 0.507218104 -6 -6 -6 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 19633731 19633736 - 3R_19633731_19633736_- 1 0.999999996 0.999999998 0 subdued FBtr0334922|FBtr0083806|FBtr0334921|FBtr0083805|FBtr0302492 19633416|19633416|19633416|19633416|19633416 19633928|19633928|19633928|19633928|19633928 3R - 19633668 19633756 3'utr subdued FlyBase G52653.1 ATTTAGGTAATCCAATTTTATGATCTGTTAATTGAAAATGATTTATTAAGTGGCTCAAACTTATATTTATGCAGCCCAAGTGAGTGCCA 21 19633735 0.990438205 6 21 213 1 1.361727836 0.043478261 0.095238095 0.173913043 21 0 0 23 3R:19633668-19633756 6 subdued FBtr0334922|FBtr0302492|FBtr0083805|FBtr0334921|FBtr0083806 19633416|19633416|19633416|19633416|19633416 19633928|19633928|19633928|19633928|19633928 TGATCT 6mer3-8 dme-bantam-3p 3R - 19633693 19633753 3'utr subdued FlyBase G39737.1 TAGGTAATCCAATTTTATGATCTGTTAATTGAAAATGATTTATTAAGTGGCTCAAACTTAT 15 19633736 0.988004308 7 13 134 0.96 1.380211242 0 0.466666667 0.68 15 1 0 24 3R:19633693-19633753 6 14.5 3337 FBgn0038721 940.6666667 28.25333333 43.49 0.0154146 0.51321378 0.333409979 -1 0 -0.5 0.1 dme-miR-276a-3p 6mer2-7 GTTCCT 3R 19633885 19633890 - 3R_19633885_19633890_- 0.999976432 0.996577708 0.99827707 0.002403244 subdued FBtr0334922|FBtr0083806|FBtr0334921|FBtr0083805|FBtr0302492 19633416|19633416|19633416|19633416|19633416 19633928|19633928|19633928|19633928|19633928 3R - 19633856 19633912 3'utr subdued FlyBase G52654.1 AGTGATTATTTGTGTTACGAATGTTCCTTTCAGTCACTTAATTAGGCCTTAGCTATG 38 19633891 0.753159584 6 36 336 0.979591837 1.681241237 0.469387755 0.210526316 0.387755102 38 1 0 48 3R:19633856-19633912 6 subdued FBtr0334922|FBtr0302492|FBtr0083805|FBtr0334921|FBtr0083806 19633416|19633416|19633416|19633416|19633416 19633928|19633928|19633928|19633928|19633928 GTTCCT 6mer2-7 dme-miR-276a-3p 3R - 19633842 19633922 3'utr subdued FlyBase G39738.1 AATCATTCAAAGTGATTATTTGTGTTACGAATGTTCCTTTCAGTCACTTAATTAGGCCTTAGCTATGACACTTTTATTATT 37 19633884 0.670737474 10 36 306 0.967213115 1.770852012 0.344262295 0.459459459 0.672131148 37 2 0 59 3R:19633842-19633922 6 30.5 3338 FBgn0038721 940.6666667 28.25333333 43.49 0.032423813 1.079518641 0.701310646 1 -6 -2.5 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 19643286 19643292 - 3R_19643286_19643292_- 0.661615645 0.661615644 0.661615645 0 Vha13 FBtr0083804|FBtr0346100 19643256|19643016 19643507|19643507 3R - 19643265 19643322 3'utr Vha13 FlyBase G52668.1 CACTCGCGCGGGATTGTATTATCATTGTTTTGTGTTCTGCCCAATACACGTTGTTGTT 11 19643294 0.987991914 10 11 112 1 1.113943352 0.076923077 0.181818182 0.307692308 11 0 0 13 3R:19643265-19643322 7 Vha13 FBtr0346100|FBtr0083804 19643016|19643256 19643507|19643507 TGTGTTC 7mer-m8 dme-miR-317-3p 3R - 19643273 19643321 3'utr Vha13 FlyBase G39753.1 ACTCGCGCGGGATTGTATTATCATTGTTTTGTGTTCTGCCCAATACACG 6 19643309 0.985991727 3 6 55 1 0.954242509 0.333333333 0.333333333 0.555555556 6 0 0 9 3R:19643273-19643321 7 5.5 3339 FBgn0026753 1193.436667 217.27 330.9333333 0.004608539 0.025314125 0.016619662 2 17 9.5 0.1 dme-miR-283-5p 8mer-A1 TGATATTA 3R 19698583 19698590 + 3R_19698583_19698590_+ 0.59218996 0.592192284 0.592191122 1.63E-06 Naam FBtr0335415 19698182 19698742 3R + 19698548 19698603 3'utr Naam FlyBase G43962.1 CTTAATGTTGTGCGCTGCACCTGTTTGAATCAAATTGATATTATATACAACCAACA 32 19698582 0.745180718 8 21 294 0.641025641 1.397940009 0.256410256 0.1875 0.333333333 32 14 0 25 3R:19698548-19698603 8 Naam FBtr0335415 19698182 19698742 TGATATTA 8mer-A1 dme-miR-283-5p 3R + 19698542 19698593 3'utr Naam FlyBase G33215.1 AGGGTTCTTAATGTTGTGCGCTGCACCTGTTTGAATCAAATTGATATTATAT 19 19698573 0.96710979 6 12 191 0.535714286 0.875061263 0.035714286 0.263157895 0.5 19 12 1 15 3R:19698542-19698593 8 24 3340 FBgn0051216 617.35 42.02 64.22 0.03887584 0.571156592 0.373715353 1 10 5.5 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 19698675 19698682 + 3R_19698675_19698682_+ 0.500120074 0.500114738 0.500117406 3.82E-06 Naam FBtr0335415 19698182 19698742 3R + 19698652 19698701 3'utr Naam FlyBase G43963.1 TGCTTCAGTGAGAAATATTGTATGTACTTAAAAATGTTCAAATAAAAGTA 11 19698674 0.982829168 3 11 87 1 1.146128036 0.357142857 0.272727273 0.428571429 11 0 0 14 3R:19698652-19698701 8 Naam FBtr0335415 19698182 19698742 GTACTTAA 8mer-A1 dme-miR-252-5p 3R + 19698643 19698691 3'utr Naam FlyBase G33216.1 TAGAACAACTGCTTCAGTGAGAAATATTGTATGTACTTAAAAATGTTCA 6 19698674 0.984116513 2 6 44 1 0.903089987 0.25 0.166666667 0.375 6 0 0 8 3R:19698643-19698691 8 7.5 3341 FBgn0051216 617.35 42.02 64.22 0.0121487 0.178486435 0.116786048 1 1 1 0.1 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 19794796 19794801 - 3R_19794796_19794801_- 1 0.998492791 0.999246395 0.001065751 bnl FBtr0300123 19794587 19795490 3R - 19794771 19794831 3'utr bnl FlyBase G52678.1 AACGAGATAAATGCGTGAAATTATAGTTGTAGCTGTATGATGGATTTATTTATTTATTTAA 22 19794820 0.816672733 9 21 209 0.961538462 1.096910013 0.423076923 0.181818182 0.307692308 22 0 1 25 3R:19794771-19794831 6 bnl FBtr0300123 19794587 19795490 AGCTGT 6mer3-8 dme-miR-1008-3p 3R - 19794768 19794820 3'utr bnl FlyBase G39761.1 TGCGTGAAATTATAGTTGTAGCTGTATGATGGATTTATTTATTTATTTAAAAA 9 19794791 0.989056978 5 8 91 0.846153846 1.041392685 0.307692308 0.444444444 0.615384615 9 2 0 11 3R:19794768-19794820 6 13 3342 FBgn0014135 131.55 3.81 5.713333333 0.098821741 3.412073491 2.27537923 19 -10 4.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 19854208 19854215 - 3R_19854208_19854215_- 0.644430525 0.643155554 0.643793039 0.00090149 Ire1 FBtr0113248|FBtr0113248|FBtr0113248 19853906|19853906|19853906 19854439|19854439|19854439 3R - 19854037 19854369 3'utr Ire1 FlyBase G52691.1 TTAATCGTGCAATTTGTGTATATGCAACTATTCCAAAATGATTCCCAATTCAGTTCTTAGCAAAAATATTCAACGGTAAGTAAACAAATGAAACTATTTTGTATACCAAGTAAGAATAATGTAGTGTGTCTTCTGTCGAATGCACGGAATTTAACTGTGATAATTTTTGATTTTGTTCAATGCCCAAGTGCAAGTTGATCTAGACAAATAGTTCGAGTTTTATATATAGTACCTAGACTTATTGTATATTTATGCATTAGTTAAGACACACCTACCTATCCCAACACTCCTCCCATTCGTGGAGATCCTTGACAAGCGAAGTTTTTAGTTTTT 873 19854219 0.834446738 64 805 6870 0.922800718 1.898049762 0.31508079 0.213058419 0.383303411 873 74 12 1028 3R:19854037-19854369 8 Ire1 FBtr0113248|FBtr0113248|FBtr0113248 19853906|19853906|19853906 19854439|19854439|19854439 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 19854032 19854368 3'utr Ire1 FlyBase G39769.1 TAATCGTGCAATTTGTGTATATGCAACTATTCCAAAATGATTCCCAATTCAGTTCTTAGCAAAAATATTCAACGGTAAGTAAACAAATGAAACTATTTTGTATACCAAGTAAGAATAATGTAGTGTGTCTTCTGTCGAATGCACGGAATTTAACTGTGATAATTTTTGATTTTGTTCAATGCCCAAGTGCAAGTTGATCTAGACAAATAGTTCGAGTTTTATATATAGTACCTAGACTTATTGTATATTTATGCATTAGTTAAGACACACCTACCTATCCCAACACTCCTCCCATTCGTGGAGATCCTTGACAAGCGAAGTTTTTAGTTTTTATATC 625 19854219 0.942288322 59 570 4917 0.919732441 1.962211439 0.275362319 0.3248 0.529542921 625 64 8 825 3R:19854032-19854368 8 416.5 3343 FBgn0261984 824.9233333 24.51333333 37.36 0.504895404 16.99075333 11.14828694 4 4 4 0.1 dme-miR-79-3p 7mer-A1 AGCTTTA 3R 19854403 19854409 - 3R_19854403_19854409_- 0.822678404 0.823349398 0.823013901 0.000474469 Ire1 FBtr0113248 19853906 19854439 3R - 19854391 19854463 stop_codon Ire1 FlyBase G52692.1 CTGCCACCTTCAACGCAGGATTAGGGCATAGACCCAACCAGATCAGATTAGACAAGCTTTAGTTGTAATCATT 51 19854416 0.797348263 10 48 290 0.93442623 1.45484486 0.114754098 0.156862745 0.295081967 51 3 1 57 3R:19854391-19854463 7 Ire1 FBtr0113248 19853906 19854439 AGCTTTA 7mer-A1 dme-miR-79-3p 3R - 19854380 19854456 stop_codon Ire1 FlyBase G39770.1 CTTCAACGCAGGATTAGGGCATAGACCCAACCAGATCAGATTAGACAAGCTTTAGTTGTAATCATTTATTAAGATAA 27 19854416 0.867403683 7 27 142 1 1.653212514 0.066666667 0.407407407 0.644444444 27 0 0 45 3R:19854380-19854456 7 28 3344 FBgn0261984 824.9233333 24.51333333 37.36 0.033942548 1.142235518 0.749464668 7 7 7 0.1 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 19899195 19899202 - 3R_19899195_19899202_- 0.385556277 0.385527018 0.385541648 2.07E-05 CG4538 FBtr0083855|FBtr0344261|FBtr0344262 19898827|19897370|19898542 19899595|19899291|19899595 3R - 19899155 19899230 3'utr CG4538 FlyBase G52721.1 AAAGAATGTCCTCAATCCCCAAATGCATCTGTGATTCATAAACGACGAGCAGCGCAGTCTTTTGAGCCCGAAGCAA 37 19899203 0.982723831 6 34 252 0.926829268 1.278753601 0.097560976 0.108108108 0.195121951 37 2 1 38 3R:19899155-19899230 8 CG4538 FBtr0344262|FBtr0083855|FBtr0344261 19898542|19898827|19897370 19899595|19899595|19899291 CTGTGATT 8mer-m1 dme-miR-308-3p 3R - 19899189 19899225 3'utr CG4538 FlyBase G39789.1 ATGTCCTCAATCCCCAAATGCATCTGTGATTCATAAA 22 19899203 0.802509403 2 19 147 0.878787879 1.161368002 0 0.363636364 0.575757576 22 3 1 29 3R:19899189-19899225 8 27 3345 FBgn0038745 776.53 28.94666667 44.57666667 0.034770067 0.932749885 0.605698048 1 1 1 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 3R 19913252 19913258 + 3R_19913252_19913258_+ 0.416121069 0.472988166 0.444554617 0.040211112 RhoGAP92B FBtr0344352|FBtr0344351|FBtr0344353|FBtr0344354|FBtr0083821 19913083|19913083|19913083|19913083|19913083 19913730|19913730|19913730|19914272|19913730 3R + 19913084 19913315 3'utr RhoGAP92B FlyBase G44024.1 GAGGGGAATGAGTAGAGAGGACGCGCAATGGAAACGTGGTCAGAGTCATTAGGTGTTACTGTTTACTCGTTAAGACTTGAACGCACAGTAATATATATATATATTTCGAAATGATCCTTGCGGTAAGGAGACTTTGTGCATTATAGAGAGAAAAGCCTCTGCGTATTATGCATTTGTATTTTTGCCTTGTTCATAAGCAATCTAATTTGTACGTGTTTAGCCATATATAACA 424 19913243 0.810809433 46 405 2641 0.958333333 2.206825876 0.35515873 0.161137441 0.297619048 422 19 2 483 3R:19913084-19913315 7 RhoGAP92B FBtr0344352|FBtr0083821|FBtr0344354|FBtr0344353|FBtr0344351 19913083|19913083|19913083|19913083|19913083 19913730|19913730|19914272|19913730|19913730 TGCATTT 7mer-m8 dme-miR-277-3p 3R + 19913067 19913395 stop_codon RhoGAP92B FlyBase G33264.1 TGGAAGTCCTCGGACTAGAGGGGAATGAGTAGAGAGGACGCGCAATGGAAACGTGGTCAGAGTCATTAGGTGTTACTGTTTACTCGTTAAGACTTGAACGCACAGTAATATATATATATATTTCGAAATGATCCTTGCGGTAAGGAGACTTTGTGCATTATAGAGAGAAAAGCCTCTGCGTATTATGCATTTGTATTTTTGCCTTGTTCATAAGCAATCTAATTTGTACGTGTTTAGCCATATATAACAATATCACGCGATATCCATAACGTATATGTATGCATATATAGTCTTTAGTAGGCCACCATAAATCAATTGTCGAAATTCGA 314 19913243 0.976419113 49 295 1904 0.943107221 1.78937923 0.369803063 0.331210191 0.5404814 314 20 6 431 3R:19913067-19913395 7 31 3346 FBgn0038747 1846.786667 74.18 113.18 0.016785913 0.4179024 0.273899982 9 9 9 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3R 19913530 19913536 + 3R_19913530_19913536_+ 0.521223855 0.521223855 0.521223855 0 RhoGAP92B FBtr0344352|FBtr0344351|FBtr0344353|FBtr0344354|FBtr0083821 19913083|19913083|19913083|19913083|19913083 19913730|19913730|19913730|19914272|19913730 3R + 19913341 19913548 3'utr RhoGAP92B FlyBase G44025.1 ATGTATGCATATATAGTCTTTAGTAGGCCACCATAAATCAATTGTCGAAATTCGATTTGTTAGCCCAAGCCAGCTCTCAATTGTTAATCCTTGTTTGAAAGGTTGTGATACTTCAGAAAGGTTTTGTGTTTCCTTAATTTTTTGCATTGCTCTTGAGTACGTTTTGTTAACTTCTCCAACGAAAGACATTGTGATTTCCTTTTATTAA 185 19913536 0.70833306 33 172 1511 0.934782609 1.48734042 0.156521739 0.183783784 0.343478261 185 9 6 215 3R:19913341-19913548 7 RhoGAP92B FBtr0344352|FBtr0083821|FBtr0344354|FBtr0344353|FBtr0344351 19913083|19913083|19913083|19913083|19913083 19913730|19913730|19914272|19913730|19913730 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 19913476 19913552 3'utr RhoGAP92B FlyBase G33265.2 AATTTTTTGCATTGCTCTTGAGTACGTTTTGTTAACTTCTCCAACGAAAGACATTGTGATTTCCTTTTATTAAAAGT 62 19913530 0.793786307 10 58 489 0.98 1.991226076 0.03 0.370967742 0.61 62 2 0 98 3R:19913476-19913552 7 65.5 3347 FBgn0038747 1846.786667 74.18 113.18 0.035467009 0.882987328 0.578724156 -6 0 -3 0.1 dme-miR-970-3p 8mer-A1 TCTTATGA 3R 19913878 19913885 + 3R_19913878_19913885_+ 0.630787069 0.630786705 0.630786887 2.83E-07 RhoGAP92B FBtr0344354 19913083 19914272 3R + 19913850 19913890 3'utr RhoGAP92B FlyBase G44028.1 GCGCGTAGTGTATGTTAGAATGTGGATCTCTTATGAAATTG 11 19913880 0.864861084 3 11 93 1 1.079181246 0.333333333 0.090909091 0.166666667 11 0 0 12 3R:19913850-19913890 8 RhoGAP92B FBtr0344354 19913083 19914272 TCTTATGA 8mer-A1 dme-miR-970-3p 3R + 19913856 19913884 3'utr RhoGAP92B FlyBase G33268.1 AGTGTATGTTAGAATGTGGATCTCTTATG 6 19913880 0.70697278 3 6 55 1 1.041392685 0.454545455 0.666666667 0.818181818 6 0 0 11 3R:19913856-19913884 7 8.5 3348 FBgn0038747 1846.786667 74.18 113.18 0.004602589 0.114586142 0.075101608 -2 -2 -2 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3R 20018636 20018641 - 3R_20018636_20018641_- 0.999975878 0.999650543 0.999813211 0.000230093 CG4433 FBtr0344139|FBtr0083843|FBtr0307345 20018267|20018580|20018580 20018985|20018985|20018985 3R - 20018598 20018697 3'utr CG4433 FlyBase G52744.1 CTTTAATTCTTATTAGTTAGCTCTAATTATTATTTATACTCAGTCCAAGCAATGTTCCAAAGTGTGCGATGTAGTCAAGTGCTTTAAAATTAAATTAAAC 55 20018645 0.812052902 11 54 354 1 1.832508913 0.029411765 0.236363636 0.382352941 55 0 0 68 3R:20018598-20018697 6 CG4433 FBtr0307345|FBtr0344139|FBtr0083843 20018580|20018267|20018580 20018985|20018985|20018985 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 20018607 20018663 3'utr CG4433 FlyBase G39807.1 TATACTCAGTCCAAGCAATGTTCCAAAGTGTGCGATGTAGTCAAGTGCTTTAAAATT 29 20018645 0.839256805 8 27 168 0.956521739 1.643452676 0.086956522 0.413793103 0.630434783 29 2 0 44 3R:20018607-20018663 6 33 3349 FBgn0038763 673 36.29333333 55.97666667 0.049034175 0.909257899 0.589531352 4 4 4 0.1 dme-miR-932-5p 6mer2-7 GAATTG 3R 20018957 20018962 - 3R_20018957_20018962_- 1 0.999998073 0.999999037 1.34E-06 CG4433 FBtr0344139|FBtr0083843|FBtr0307345 20018267|20018580|20018580 20018985|20018985|20018985 3R - 20018895 20018981 3'utr CG4433 FlyBase G52747.1 AGGAGGAGGGCGAGCGATTGAATTGCAAAAGACAAACTACCTTCATGATCGGATGCTCCGCTCCGAGTGGCAGAGCAAGTGGTTTTT 14 20018963 0.95868457 7 13 63 0.941176471 0.903089987 0.294117647 0.214285714 0.352941176 14 0 1 16 3R:20018895-20018981 6 CG4433 FBtr0307345|FBtr0344139|FBtr0083843 20018580|20018267|20018580 20018985|20018985|20018985 GAATTG 6mer2-7 dme-miR-932-5p 3R - 20018895 20019007 stop_codon CG4433 FlyBase G39808.1 AATGCAGATACATGACAACTAACAGGAGGAGGAGGGCGAGCGATTGAATTGCAAAAGACAAACTACCTTCATGATCGGATGCTCCGCTCCGAGTGGCAGAGCAAGTGGTTTTT 14 20018963 0.982817464 7 13 48 0.904761905 1.278753601 0.047619048 0.357142857 0.571428571 14 2 0 19 3R:20018895-20019007 6 6 3350 FBgn0038763 673 36.29333333 55.97666667 0.008915305 0.165319618 0.107187519 1 1 1 0.1 dme-miR-932-5p 6mer2-7 GAATTG 3R 20301533 20301538 + 3R_20301533_20301538_+ 1 0.99999968 0.99999984 2.12E-07 cic FBtr0334305 20300626 20303942 3R + 20301442 20301549 3'utr cic FlyBase G44096.1 CGCACATCTACAAGCGCTTTTAAACTGTTTGCTTTTGTTCTCAAAGTTTATGCAACACGCGAACCTTTTTAAATTGTATGTACATTTCCTTGAATTGGCTTTTTACAC 18 20301510 0.986352539 12 16 139 0.947368421 1.255272505 0.368421053 0.055555556 0.105263158 18 1 0 18 3R:20301442-20301549 6 cic FBtr0334305 20300626 20303942 GAATTG 6mer2-7 dme-miR-932-5p 3R + 20301418 20301562 3'utr cic FlyBase G33315.1 AAAACCCCCAAACTAACACCCAATCGCACATCTACAAGCGCTTTTAAACTGTTTGCTTTTGTTCTCAAAGTTTATGCAACACGCGAACCTTTTTAAATTGTATGTACATTTCCTTGAATTGGCTTTTTACACTGTTGTCTAATTG 18 20301536 0.98932963 11 16 162 1 1.361727836 0.086956522 0.277777778 0.434782609 18 0 0 23 3R:20301418-20301562 6 6.5 3351 FBgn0262582 2700.526667 30.66 46.83666667 0.002406938 0.212002609 0.138780158 23 -3 10 0.1 dme-miR-7-5p 8mer-A1 GTCTTCCA 3R 20301716 20301723 + 3R_20301716_20301723_+ 0.675381662 0.675381661 0.675381661 0 cic FBtr0334305 20300626 20303942 3R + 20301608 20301738 3'utr cic FlyBase G44097.1 TAAATTGTAAACATACCGAAAAATAAACTCTAAAAAGAAAATAATTCAAAAAACTTATTACCGACGATTGAAAGAATACAAACCAGAGAGAGAATGAGAGAACTAACTGTCTTCCACTGTTGCTGCAATAT 384 20301702 0.928908577 21 359 1960 0.939953811 1.831443159 0.233256351 0.1171875 0.217090069 384 21 5 407 3R:20301608-20301738 8 cic FBtr0334305 20300626 20303942 GTCTTCCA 8mer-A1 dme-miR-7-5p 3R + 20301647 20301850 3'utr cic FlyBase G33316.1 AATAATTCAAAAAACTTATTACCGACGATTGAAAGAATACAAACCAGAGAGAGAATGAGAGAACTAACTGTCTTCCACTGTTGCTGCAATATACTATTTAATATTGTTTACCATTTCGGTTCGATTAAATTTAGTTGTAAATTAATGTTTTAAGTATGGACTGCATTTTATTCATATGCAAAATTCTGTTCATTGTGAGTTGTT 221 20301702 0.9341476 31 208 1341 0.93993994 1.893484346 0.243243243 0.371040724 0.582582583 221 17 3 313 3R:20301647-20301850 8 231 3352 FBgn0262582 2700.526667 30.66 46.83666667 0.08553887 7.534246575 4.932033307 14 14 14 0.1 dme-miR-307a-3p 7mer-A1 GTTGTGA 3R 20323684 20323690 + 3R_20323684_20323690_+ 0.790102852 0.781822713 0.785962783 0.005854986 CG42668 FBtr0306634|FBtr0302668|FBtr0302670|FBtr0302667|FBtr0306633|FBtr0302673|FBtr0303586|FBtr0302669 20323448|20323448|20323448|20323448|20323448|20323448|20323448|20323448 20324196|20324196|20324196|20324196|20324196|20324196|20324196|20324196 3R + 20323579 20323726 3'utr CG42668 FlyBase G44126.1 GACAACGTATATATACTTTACTGAATTGTACATTTGGTCCTACTCAAATGCCTTCGCACGCTGCCAGATATATAAGCCCGACCGAGGCGCGTGGCCAGAACATCCGTTGTGAGAAAGTCTAATCACGAACTATGTCTAGGATTAAGTG 44 20323684 0.961961574 17 41 255 0.944444444 1.707570176 0.351851852 0.181818182 0.333333333 44 3 0 51 3R:20323579-20323726 7 CG42668 FBtr0302667|FBtr0302670|FBtr0302668|FBtr0306634|FBtr0302669|FBtr0303586|FBtr0302673|FBtr0306633 20323448|20323448|20323448|20323448|20323448|20323448|20323448|20323448 20324196|20324196|20324196|20324196|20324196|20324196|20324196|20324196 GTTGTGA 7mer-A1 dme-miR-307a-3p 3R + 20323613 20323726 3'utr CG42668 FlyBase G33342.2 TGGTCCTACTCAAATGCCTTCGCACGCTGCCAGATATATAAGCCCGACCGAGGCGCGTGGCCAGAACATCCGTTGTGAGAAAGTCTAATCACGAACTATGTCTAGGATTAAGTG 29 20323686 0.886643324 9 21 109 0.872727273 1.079181246 0.327272727 0.620689655 0.8 29 4 3 48 3R:20323613-20323726 7 8 3353 FBgn0261550 4720.296667 135.9533333 209.03 0.001694809 0.058843721 0.038272018 0 -2 -1 0.1 dme-miR-282-5p 7mer-m8 AGAGGCT 3R 20324027 20324033 + 3R_20324027_20324033_+ 0.623854497 0.625940031 0.624897264 0.001474671 CG42668 FBtr0306634|FBtr0302668|FBtr0302670|FBtr0302667|FBtr0306633|FBtr0302673|FBtr0303586|FBtr0302669 20323448|20323448|20323448|20323448|20323448|20323448|20323448|20323448 20324196|20324196|20324196|20324196|20324196|20324196|20324196|20324196 3R + 20323975 20324200 3'utr CG42668 FlyBase G44127.2 AGTTAATATTAAATGACACGATTTAGGATGAACGACGAACGAACAATGCTCGAGAGGCTCTGCCCCATAAAGCACCACTTATACACAGTGCAACATACCTTAGAGATTTAATGCGAGAAGTGCTTATAGTAATTACTTTTAGTGTCTCTTATACACGAATTGTTTTTCCTCTTCCCAATACCTGCATACTTAGAATTTAATAAACTCTCCCCATTTCAAATCAAAA 133 20324035 0.977300125 32 120 682 0.925925926 1.698970004 0.148148148 0.180451128 0.327160494 133 10 2 150 3R:20323975-20324200 7 CG42668 FBtr0302667|FBtr0302670|FBtr0302668|FBtr0306634|FBtr0302669|FBtr0303586|FBtr0302673|FBtr0306633 20323448|20323448|20323448|20323448|20323448|20323448|20323448|20323448 20324196|20324196|20324196|20324196|20324196|20324196|20324196|20324196 AGAGGCT 7mer-m8 dme-miR-282-5p 3R + 20323992 20324200 3'utr CG42668 FlyBase G33346.1 ACGATTTAGGATGAACGACGAACGAACAATGCTCGAGAGGCTCTGCCCCATAAAGCACCACTTATACACAGTGCAACATACCTTAGAGATTTAATGCGAGAAGTGCTTATAGTAATTACTTTTAGTGTCTCTTATACACGAATTGTTTTTCCTCTTCCCAATACCTGCATACTTAGAATTTAATAAACTCTCCCCATTTCAAATCAAAA 90 20324035 0.83925902 25 82 471 0.92481203 1.390935107 0.090225564 0.388888889 0.586466165 90 6 4 123 3R:20323992-20324200 7 53.5 3354 FBgn0261550 4720.296667 135.9533333 209.03 0.011334033 0.393517383 0.255944123 -8 -8 -8 0.1 dme-miR-1012-3p 6mer2-7 TGACTA 3R 20325113 20325118 - 3R_20325113_20325118_- 0.99999999 0.999996016 0.999998003 2.83E-06 CG4360 FBtr0083899|FBtr0113252 20324272|20324272 20325628|20326217 3R - 20325067 20325192 3'utr CG4360 FlyBase G52775.1 GCTTTTCAAAGCTTTGTAAATGAATCATCGGCGTCTTTTTAAGTTTGGTTGCTGTTTTCGAATGGCAAGGAAAATGACTACAATAAATTTAGATGTGACCTACTTTGCACAATAACCTTTTATGCC 16 20325118 0.985350791 11 15 129 0.944444444 1.230448921 0.222222222 0.0625 0.166666667 16 1 0 17 3R:20325067-20325192 6 CG4360 FBtr0083899|FBtr0113252 20324272|20324272 20325628|20326217 TGACTA 6mer2-7 dme-miR-1012-3p 3R - 20325094 20325151 3'utr CG4360 FlyBase G39828.1 AGTTTGGTTGCTGTTTTCGAATGGCAAGGAAAATGACTACAATAAATTTAGATGTGAC 6 20325130 0.869581263 5 6 42 1 0.903089987 0.5 0.333333333 0.5 6 0 0 8 3R:20325094-20325151 6 4 3355 FBgn0038787 2517.203333 86.49333333 132.24 0.001589065 0.046246339 0.030248034 0 12 6 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 3R 20325438 20325443 - 3R_20325438_20325443_- 0.97445544 0.971390498 0.972922969 0.002167212 CG4360 FBtr0083899|FBtr0113252 20324272|20324272 20325628|20326217 3R - 20325408 20325465 3'utr CG4360 FlyBase G52777.1 ATATATACTCGAAAGTGTTATTTACCTGCTGTGCAGAGCGCAATTGTATGTAACTATA 54 20325445 0.975460906 7 52 445 0.984126984 1.792391689 0.253968254 0.148148148 0.26984127 54 1 0 62 3R:20325408-20325465 6 CG4360 FBtr0083899|FBtr0113252 20324272|20324272 20325628|20326217 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 3R - 20325304 20325580 3'utr CG4360 FlyBase G39829.1 AGCCAGCCAGTCAAGCAGCCATTGAGGAATAGTGCAATATGCATGCCACATAGCACATACACTTATAGATCGCATATACGGCATACGAATACGATTACATGAATACTATATTTGAATATATACTCGAAAGTGTTATTTACCTGCTGTGCAGAGCGCAATTGTATGTAACTATATCGTAGAGAGCTGATCCACATGCGTGTCCAATTGTAAATTAAGGCTAGCCGTGTTGGCATAAGCCACAGATGATATGATACAGGGTGTTTAGGCCTAAACTCTA 96 20325445 0.980148801 29 92 635 0.95890411 1.669006781 0.226027397 0.427083333 0.623287671 96 4 2 140 3R:20325304-20325580 6 49 3356 FBgn0038787 2517.203333 86.49333333 132.24 0.019466048 0.566517651 0.370538415 2 2 2 0.1 dme-miR-276a-3p 6mer2-7 GTTCCT 3R 20325694 20325699 - 3R_20325694_20325699_- 0.99999997 0.999975817 0.999987894 1.71E-05 CG4360 FBtr0113252 20324272 20326217 3R - 20325674 20325719 3'utr CG4360 FlyBase G52779.1 CGGTGAAAAGCCCTACAACTGTTCCTTTTGTCCTAAACAGTTCCGG 15 20325699 0.979081807 6 13 126 0.882352941 0.698970004 0 0.133333333 0.235294118 15 0 2 15 3R:20325674-20325719 6 CG4360 FBtr0113252 20324272 20326217 GTTCCT 6mer2-7 dme-miR-276a-3p 3R - 20325673 20325711 3'utr CG4360 FlyBase G39830.1 AGCCCTACAACTGTTCCTTTTGTCCTAAACAGTTCCGGC 6 20325695 0.984407809 4 5 43 0.888888889 0.903089987 0 0.5 0.666666667 6 1 0 8 3R:20325673-20325711 6 10.5 3357 FBgn0038787 2517.203333 86.49333333 132.24 0.004171296 0.121396639 0.079401089 0 -4 -2 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 20325771 20325776 - 3R_20325771_20325776_- 0.755362981 0.755362932 0.755362956 7.07E-08 CG4360 FBtr0113252|FBtr0113252|FBtr0113252 20324272|20324272|20324272 20326217|20326217|20326217 3R - 20325742 20325795 3'utr CG4360 FlyBase G52780.1 AGCCCTACAAGTGCAAGATCTGTGAGGTCAACTTCCGGCAGGTGGCCACGCTGA 12 20325777 0.912384647 6 12 62 1 1.146128036 0 0.166666667 0.285714286 12 0 0 14 3R:20325742-20325795 6 CG4360 FBtr0113252|FBtr0113252|FBtr0113252 20324272|20324272|20324272 20326217|20326217|20326217 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 20325748 20325795 3'utr CG4360 FlyBase G39831.1 AGCCCTACAAGTGCAAGATCTGTGAGGTCAACTTCCGGCAGGTGGCCA 8 20325777 0.910315001 3 8 41 1 1.113943352 0.307692308 0.375 0.615384615 8 0 0 13 3R:20325748-20325795 6 10 3358 FBgn0038787 2517.203333 86.49333333 132.24 0.003972663 0.115615847 0.075620085 1 1 1 0.1 dme-miR-33-5p 7mer-m8 CAATGCA 3R 20535895 20535901 - 3R_20535895_20535901_- 0.646413439 0.588918925 0.617666182 0.040654751 Stat92E FBtr0334584|FBtr0089486|FBtr0089485|FBtr0089487|FBtr0100457|FBtr0334582|FBtr0334586|FBtr0334581|FBtr0334583|FBtr0089484 20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535321|20535691|20535691 20537408|20537408|20537408|20537408|20537408|20538528|20537408|20537408|20537408|20537408 3R - 20535795 20535938 3'utr Stat92E FlyBase G52794.1 TGAAACTTGTTTGTTTGAGTCATCAGGGCAGAGTTTGCAATGCATTTCAAATGCGCCACATGCGATTGCCTTTTTAGTCAGCTATTAGAGACACGAGGACCATATTACGTTTGTTTGAGAGATCGTAAACATAATCATTTATGT 34 20535916 0.867330245 16 31 259 0.888888889 1.505149978 0.25 0.058823529 0.111111111 34 4 0 32 3R:20535795-20535938 7 Stat92E FBtr0100457|FBtr0089487|FBtr0334581|FBtr0089485|FBtr0334584|FBtr0089486|FBtr0089484|FBtr0334583|FBtr0334586|FBtr0334582 20535691|20535691|20535321|20535691|20535691|20535691|20535691|20535691|20535691|20535691 20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20538528 CAATGCA 7mer-m8 dme-miR-33-5p 3R - 20535888 20535930 3'utr Stat92E FlyBase G39845.1 GTTTGTTTGAGTCATCAGGGCAGAGTTTGCAATGCATTTCAAA 11 20535916 0.973915774 5 10 62 0.9375 0.875061263 0.375 0.363636364 0.5625 11 0 1 15 3R:20535888-20535930 7 3.5 3359 FBgn0016917 6780.14 209.8333333 320.8166667 0.000516214 0.016679905 0.010909658 15 15 15 0.1 dme-miR-932-5p 6mer2-7 GAATTG 3R 20536017 20536022 - 3R_20536017_20536022_- 0.999999962 0.998844624 0.999422293 0.000816991 Stat92E FBtr0334584|FBtr0089486|FBtr0089485|FBtr0089487|FBtr0100457|FBtr0334582|FBtr0334586|FBtr0334581|FBtr0334583|FBtr0089484 20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535321|20535691|20535691 20537408|20537408|20537408|20537408|20537408|20538528|20537408|20537408|20537408|20537408 3R - 20535953 20536115 3'utr Stat92E FlyBase G52795.1 AAGCCTATGTTAAACGAAAGTGGAAAAACAATCAACGAGAGCAGCAACGCAGGGATTGATTGCTTTAATTTTAGTTATAATCTAAGTAAGATTGAATTGCTTTATGTAACCCCATCCTTTATTGGCTTCCAATGCTGAAAATGCGCAAAAATTTGAACTAATC 60 20536020 0.999984639 18 58 474 0.97260274 1.550228353 0.232876712 0.166666667 0.315068493 60 1 1 71 3R:20535953-20536115 6 Stat92E FBtr0100457|FBtr0089487|FBtr0334581|FBtr0089485|FBtr0334584|FBtr0089486|FBtr0089484|FBtr0334583|FBtr0334586|FBtr0334582 20535691|20535691|20535321|20535691|20535691|20535691|20535691|20535691|20535691|20535691 20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20538528 GAATTG 6mer2-7 dme-miR-932-5p 3R - 20535934 20536066 3'utr Stat92E FlyBase G39846.1 CAGGGATTGATTGCTTTAATTTTAGTTATAATCTAAGTAAGATTGAATTGCTTTATGTAACCCCATCCTTTATTGGCTTCCAATGCTGAAAATGCGCAAAAATTTGAACTAATCAATGTATATTTTTTTGAAA 44 20536020 0.986791595 20 42 366 0.966101695 1.45484486 0.084745763 0.272727273 0.457627119 44 1 1 57 3R:20535934-20536066 6 28.5 3360 FBgn0016917 6780.14 209.8333333 320.8166667 0.004203453 0.135822081 0.088835784 -2 -2 -2 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 20536257 20536262 - 3R_20536257_20536262_- 0.999996888 0.99999856 0.999997724 1.20E-06 Stat92E FBtr0334584|FBtr0334584|FBtr0334584|FBtr0089486|FBtr0089486|FBtr0089486|FBtr0089485|FBtr0089485|FBtr0089485|FBtr0089487|FBtr0089487|FBtr0089487|FBtr0100457|FBtr0100457|FBtr0100457|FBtr0334582|FBtr0334582|FBtr0334582|FBtr0334586|FBtr0334586|FBtr0334586|FBtr0334581|FBtr0334581|FBtr0334581|FBtr0334583|FBtr0334583|FBtr0334583|FBtr0089484|FBtr0089484|FBtr0089484 20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535321|20535321|20535321|20535691|20535691|20535691|20535691|20535691|20535691 20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20538528|20538528|20538528|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408 3R - 20536129 20536314 3'utr Stat92E FlyBase G52796.1 CTTTTATATATGTATACATATGATTTCAATTTGTGCACTATGACGTGTTCGTCTGTGACAAAGCATTACGTTTAGATGATACTGACAAAATAATCGGTTTAGTTAGTGAGTAACTATTTGTTGAATCTAAATTTTTGATTTTGATTTTAATTTTATGGCCTAATTTTAAAACTTTGATATACAATT 276 20536263 0.855399416 35 263 2215 0.953216374 2.212187604 0.266081871 0.202898551 0.356725146 276 15 1 326 3R:20536129-20536314 6 Stat92E FBtr0100457|FBtr0100457|FBtr0100457|FBtr0089487|FBtr0089487|FBtr0089487|FBtr0334581|FBtr0334581|FBtr0334581|FBtr0089485|FBtr0089485|FBtr0089485|FBtr0334584|FBtr0334584|FBtr0334584|FBtr0089486|FBtr0089486|FBtr0089486|FBtr0089484|FBtr0089484|FBtr0089484|FBtr0334583|FBtr0334583|FBtr0334583|FBtr0334586|FBtr0334586|FBtr0334586|FBtr0334582|FBtr0334582|FBtr0334582 20535691|20535691|20535691|20535691|20535691|20535691|20535321|20535321|20535321|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691 20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20538528|20538528|20538528 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 20536200 20536313 3'utr Stat92E FlyBase G39849.1 TTTTATATATGTATACATATGATTTCAATTTGTGCACTATGACGTGTTCGTCTGTGACAAAGCATTACGTTTAGATGATACTGACAAAATAATCGGTTTAGTTAGTGAGTAACT 150 20536263 0.812100701 24 142 1134 0.935779817 1.832508913 0.23853211 0.36 0.559633028 150 12 2 204 3R:20536200-20536313 6 127.5 3361 FBgn0016917 6780.14 209.8333333 320.8166667 0.018804921 0.607625099 0.397423243 1 1 1 0.1 dme-miR-184-3p 7mer-m8 TCCGTCC 3R 20538315 20538321 - 3R_20538315_20538321_- 0.661588297 0.65671586 0.659152078 0.003445307 Stat92E FBtr0334585 20538134 20538528 3R - 20538301 20538333 3'utr Stat92E FlyBase G52799.1 TCATCCGATCGATCCGTCCTGACCATCATCTCC 6 20538313 0.730722845 4 5 28 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 3R:20538301-20538333 7 Stat92E FBtr0334585 20538134 20538528 TCCGTCC 7mer-m8 dme-miR-184-3p 3R - 20538305 20538336 3'utr Stat92E FlyBase G39853.1 CTCTCATCCGATCGATCCGTCCTGACCATCAT 5 20538314 0.916419868 3 5 26 1 0.903089987 0.125 0.4 0.625 5 0 0 8 3R:20538305-20538336 7 5 3362 FBgn0016917 6780.14 209.8333333 320.8166667 0.000737448 0.023828435 0.015585225 -8 -7 -7.5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 20572687 20572692 + 3R_20572687_20572692_+ 0.98395204 0.979777672 0.981864856 0.002951676 CG5191 FBtr0345213|FBtr0083907|FBtr0083904|FBtr0083906|FBtr0083905|FBtr0083908 20572462|20572462|20572462|20572462|20572462|20572462 20573000|20573000|20573000|20573000|20573000|20573000 3R + 20572618 20572714 3'utr CG5191 FlyBase G44142.1 AGGAAAGGAATCCCTAGATCAGCCTCCATACTTTATCAGCATTTTATTCGACCATTACACCATCACACCACCAAATGTTCGTTCGGGACCTTCGAAA 100 20572693 0.967073056 11 100 543 1 2.079181246 0.175 0.18 0.316666667 100 0 0 120 3R:20572618-20572714 6 CG5191 FBtr0083905|FBtr0083908|FBtr0083904|FBtr0083906|FBtr0345213|FBtr0083907 20572462|20572462|20572462|20572462|20572462|20572462 20573000|20573000|20573000|20573000|20573000|20573000 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 20572602 20572761 3'utr CG5191 FlyBase G33359.1 TGGCTGAATGGTAGAAAGGAAAGGAATCCCTAGATCAGCCTCCATACTTTATCAGCATTTTATTCGACCATTACACCATCACACCACCAAATGTTCGTTCGGGACCTTCGAAATTAGTAATCCCTCAATCGCGAGTCATTACCACCCATTGTATTAAATT 61 20572693 0.973635749 14 61 370 1 1.973127854 0.191489362 0.393442623 0.606382979 61 0 0 94 3R:20572602-20572761 6 70.5 3363 FBgn0038803 157 7.076666667 10.67333333 0.449044586 9.962317475 6.605246721 -6 -6 -6 0.1 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 20572792 20572797 + 3R_20572792_20572797_+ 0.967459633 0.997280686 0.982370159 0.021086702 CG5191 FBtr0345213|FBtr0083907|FBtr0083904|FBtr0083906|FBtr0083905|FBtr0083908 20572462|20572462|20572462|20572462|20572462|20572462 20573000|20573000|20573000|20573000|20573000|20573000 3R + 20572791 20572836 3'utr CG5191 FlyBase G44144.1 GAGCTGTACATCGTATTCGTATTCGTAATCGTATTATCTTTACCTA 6 20572806 0.968920589 5 6 56 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3R:20572791-20572836 6 CG5191 FBtr0083905|FBtr0083908|FBtr0083904|FBtr0083906|FBtr0345213|FBtr0083907 20572462|20572462|20572462|20572462|20572462|20572462 20573000|20573000|20573000|20573000|20573000|20573000 AGCTGT 6mer3-8 dme-miR-1008-3p 3R + 20572790 20572837 3'utr CG5191 FlyBase G33360.1 TGAGCTGTACATCGTATTCGTATTCGTAATCGTATTATCTTTACCTAT 6 20572806 0.993222152 4 5 64 0.888888889 0.903089987 0 0.5 0.666666667 6 1 0 8 3R:20572790-20572837 6 3 3364 FBgn0038803 157 7.076666667 10.67333333 0.01910828 0.423928403 0.281074329 -14 -14 -14 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 20581843 20581849 - 3R_20581843_20581849_- 0.801968593 0.801970204 0.801969399 1.13E-06 CG16953 FBtr0300803|FBtr0300803|FBtr0300803 20581768|20581768|20581768 20582499|20582499|20582499 3R - 20581815 20581885 3'utr CG16953 FlyBase G52839.1 CATCACACACTTAACACGCGCGACACAAATATTCATTGTGATAGAAATAGAACAAACAGTATGTACGTTTA 98 20581850 0.684349813 9 86 609 0.868421053 1.393575203 0.289473684 0.12244898 0.245614035 98 12 3 99 3R:20581815-20581885 7 CG16953 FBtr0300803|FBtr0300803|FBtr0300803 20581768|20581768|20581768 20582499|20582499|20582499 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 20581779 20581877 3'utr CG16953 FlyBase G39887.1 ACTTAACACGCGCGACACAAATATTCATTGTGATAGAAATAGAACAAACAGTATGTACGTTTACTAAAACGAAAAGTTTGAAGAAAACCCGTATACTTA 47 20581850 0.801804783 10 44 305 0.953846154 1.315270435 0.184615385 0.319148936 0.507692308 47 1 2 62 3R:20581779-20581877 7 67 3365 FBgn0038809 1215.62 52.09333333 79.63 0.055115908 1.286153059 0.841391435 1 1 1 0.1 dme-miR-14-3p 7mer-m8 AAGACTG 3R 20582041 20582047 - 3R_20582041_20582047_- 0.67159982 0.671149747 0.671374784 0.000318269 CG16953 FBtr0300803 20581768 20582499 3R - 20582004 20582158 3'utr CG16953 FlyBase G52841.1 ACGCACACACTTGCTCATCGATGGCCAAAATGTGGAGTAACAAGCATCCATTGGACCGCAATCAGTTCCAGGATTTGGGAACGCAACTGCAGATCCCTTTGGATATTGATAAAGACTGTCTTTGTTCTAAAAGCAAAAGTAAATCTGGTTAAAAA 84 20582050 0.905696364 22 80 529 0.958762887 1.968482949 0.092783505 0.119047619 0.237113402 84 4 0 93 3R:20582004-20582158 7 CG16953 FBtr0300803 20581768 20582499 AAGACTG 7mer-m8 dme-miR-14-3p 3R - 20582025 20582096 3'utr CG16953 FlyBase G39889.1 CAGTTCCAGGATTTGGGAACGCAACTGCAGATCCCTTTGGATATTGATAAAGACTGTCTTTGTTCTAAAAGC 27 20582050 0.908371874 10 24 224 0.928571429 1.290034611 0.238095238 0.333333333 0.571428571 27 2 1 39 3R:20582025-20582096 7 25 3366 FBgn0038809 1215.62 52.09333333 79.63 0.020565637 0.479907858 0.313952028 3 3 3 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 3R 20582201 20582206 - 3R_20582201_20582206_- 0.892088844 0.893678764 0.892883804 0.0011243 CG16953 FBtr0300803|FBtr0300803 20581768|20581768 20582499|20582499 3R - 20582159 20582228 3'utr CG16953 FlyBase G52842.1 GAATCTTTTTTACGTTTCCAAATACTTATCGTCCCCTACGTTACCATTGTAATCATCTCCTTTGAACATT 10 20582202 0.989512395 7 7 80 0.714285714 1 0.142857143 0.2 0.428571429 10 4 0 10 3R:20582159-20582228 6 CG16953 FBtr0300803|FBtr0300803 20581768|20581768 20582499|20582499 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 3R - 20582172 20582238 3'utr CG16953 FlyBase G39891.1 AGAGATGATAGAATCTTTTTTACGTTTCCAAATACTTATCGTCCCCTACGTTACCATTGTAATCATC 10 20582202 0.985316298 8 9 71 0.882352941 1.176091259 0.176470588 0.5 0.705882353 10 2 0 15 3R:20582172-20582238 6 4.5 3367 FBgn0038809 1215.62 52.09333333 79.63 0.003701815 0.086383414 0.056511365 -4 -4 -4 0.1 dme-miR-8-3p 6mer2-7 AGTATT 3R 20586141 20586146 - 3R_20586141_20586146_- 0.999999929 1 0.999999965 7.07E-08 2-Sep FBtr0334579|FBtr0083945 20586127|20586127 20586345|20586345 3R - 20586131 20586210 3'utr 2-Sep FlyBase G52853.1 TACACGCATATGTACGCAGGCATATAATGATTATGTATTTACAACTAACGAATAAATCGAACTTAGTATTTTAACAAAGT 19 20586140 0.757763503 10 19 129 1 1.397940009 0.04 0.315789474 0.48 19 0 0 25 3R:20586131-20586210 6 2-Sep FBtr0334579|FBtr0083945 20586127|20586127 20586345|20586345 AGTATT 6mer2-7 dme-miR-8-3p 3R - 20586135 20586170 3'utr 2-Sep FlyBase G39899.1 ACAACTAACGAATAAATCGAACTTAGTATTTTAACA 6 20586140 0.976731561 2 6 46 1 1 0.2 0.666666667 0.8 6 0 0 10 3R:20586135-20586170 6 8 3368 FBgn0014029 1104 83.25 126.7633333 0.007246377 0.096096096 0.063109732 -6 -6 -6 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3R 20586286 20586291 - 3R_20586286_20586291_- 0.97238805 0.490642946 0.731515498 0.340645298 2-Sep FBtr0334579|FBtr0083945 20586127|20586127 20586345|20586345 3R - 20586237 20586311 3'utr 2-Sep FlyBase G52854.1 TTCTGTGCGGTTCGCTTATCCCAAAGTAATTATTGCTTTCTCATCTCGTTGTCTTTCATTTGTACTATTAAGTTT 50 20586263 0.759179007 18 47 537 0.951612903 1.770852012 0.241935484 0.22 0.370967742 50 3 0 59 3R:20586237-20586311 6 2-Sep FBtr0334579|FBtr0083945 20586127|20586127 20586345|20586345 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 20586238 20586320 3'utr 2-Sep FlyBase G39900.1 TATTGAGAATTCTGTGCGGTTCGCTTATCCCAAAGTAATTATTGCTTTCTCATCTCGTTGTCTTTCATTTGTACTATTAAGTT 30 20586271 0.855345482 16 24 312 0.787234043 1.267171728 0.191489362 0.333333333 0.574468085 30 9 1 37 3R:20586238-20586320 6 12.5 3369 FBgn0014029 1104 83.25 126.7633333 0.011322464 0.15015015 0.098608956 -28 -20 -24 0.1 dme-miR-2535b-3p 7mer-A1 CGTGAGA 3R 20611137 20611143 + 3R_20611137_20611143_+ 0.782867465 0.782897805 0.782882635 2.14E-05 bon FBtr0334639|FBtr0334637|FBtr0330043|FBtr0300617|FBtr0334638|FBtr0083912 20610835|20610835|20611057|20610835|20610835|20610835 20612540|20612540|20612540|20611624|20612540|20612540 3R + 20611104 20611154 3'utr bon FlyBase G44184.1 TGAGAAATCGATCCGTAGGCTTGCCCCCACAATCGTGAGACACACATACAT 11 20611139 0.938032697 3 11 42 1 1.176091259 0 0.272727273 0.466666667 11 0 0 15 3R:20611104-20611154 7 bon FBtr0334638|FBtr0083912|FBtr0330043|FBtr0300617|FBtr0334639|FBtr0334637 20610835|20610835|20611057|20610835|20610835|20610835 20612540|20612540|20612540|20611624|20612540|20612540 CGTGAGA 7mer-A1 dme-miR-2535b-3p 3R + 20611111 20611162 3'utr bon FlyBase G33384.1 TCGATCCGTAGGCTTGCCCCCACAATCGTGAGACACACATACATCTAAACAA 7 20611139 0.897487346 3 7 23 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 3R:20611111-20611162 7 7 3370 FBgn0023097 953.03 20.03333333 30.79333333 0.007344994 0.349417637 0.227321931 -2 -2 -2 0.1 dme-miR-932-5p 7mer-A1 GAATTGA 3R 20611312 20611318 + 3R_20611312_20611318_+ 0.823288676 0.819091419 0.821190047 0.002967939 bon FBtr0334639|FBtr0334637|FBtr0330043|FBtr0300617|FBtr0334638|FBtr0083912 20610835|20610835|20611057|20610835|20610835|20610835 20612540|20612540|20612540|20611624|20612540|20612540 3R + 20611273 20611440 3'utr bon FlyBase G44185.1 ACGTACAATGGAATAAATTGAATCCCCTTGGGCGATCGAGAATTGAAATGAGATATGTTTAGCTAAATTTTAAGTGTTGAATATCCATAAACATTGATATAAATATAACTATAAATATGTATACCTTTCATTAGGGATCCACTAGAGATTAAAAATAGGTGTAAGTGT 30 20611315 0.978607654 15 29 205 0.96969697 1.505149978 0.181818182 0.1 0.181818182 30 1 0 32 3R:20611273-20611440 7 bon FBtr0334638|FBtr0083912|FBtr0330043|FBtr0300617|FBtr0334639|FBtr0334637 20610835|20610835|20611057|20610835|20610835|20610835 20612540|20612540|20612540|20611624|20612540|20612540 GAATTGA 7mer-A1 dme-miR-932-5p 3R + 20611273 20611338 3'utr bon FlyBase G33386.1 ACGTACAATGGAATAAATTGAATCCCCTTGGGCGATCGAGAATTGAAATGAGATATGTTTAGCTAA 18 20611315 0.972968995 7 18 108 1 1.431363764 0.185185185 0.388888889 0.592592593 18 0 0 27 3R:20611273-20611338 7 14.5 3371 FBgn0023097 953.03 20.03333333 30.79333333 0.015214631 0.723793677 0.470881143 -3 -3 -3 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 20611535 20611541 + 3R_20611535_20611541_+ 0.801965224 0.801968982 0.801967103 2.69E-06 bon FBtr0334639|FBtr0334639|FBtr0334639|FBtr0334637|FBtr0334637|FBtr0334637|FBtr0330043|FBtr0330043|FBtr0330043|FBtr0300617|FBtr0300617|FBtr0300617|FBtr0334638|FBtr0334638|FBtr0334638|FBtr0083912|FBtr0083912|FBtr0083912 20610835|20610835|20610835|20610835|20610835|20610835|20611057|20611057|20611057|20610835|20610835|20610835|20610835|20610835|20610835|20610835|20610835|20610835 20612540|20612540|20612540|20612540|20612540|20612540|20612540|20612540|20612540|20611624|20611624|20611624|20612540|20612540|20612540|20612540|20612540|20612540 3R + 20611448 20611553 3'utr bon FlyBase G44186.1 CGAGTGAAATTGACATCCTTGTTTCACCGATTTGTGTTTGGGATGGAACCCGTTCTAACCAATCTTTGTTGGAATTGTATTTACTTTTGTGATAGCGAAAAACAAT 89 20611533 0.988943185 18 82 774 0.914529915 1.330413773 0.179487179 0.213483146 0.401709402 89 6 4 107 3R:20611448-20611553 7 bon FBtr0334638|FBtr0334638|FBtr0334638|FBtr0083912|FBtr0083912|FBtr0083912|FBtr0330043|FBtr0330043|FBtr0330043|FBtr0300617|FBtr0300617|FBtr0300617|FBtr0334639|FBtr0334639|FBtr0334639|FBtr0334637|FBtr0334637|FBtr0334637 20610835|20610835|20610835|20610835|20610835|20610835|20611057|20611057|20611057|20610835|20610835|20610835|20610835|20610835|20610835|20610835|20610835|20610835 20612540|20612540|20612540|20612540|20612540|20612540|20612540|20612540|20612540|20611624|20611624|20611624|20612540|20612540|20612540|20612540|20612540|20612540 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 20611514 20611577 3'utr bon FlyBase G33387.2 TGTTGGAATTGTATTTACTTTTGTGATAGCGAAAAACAATAAGATGAACAAATTACCGTTTATT 54 20611533 0.797691555 12 49 448 0.905405405 1.224014811 0.189189189 0.296296296 0.486486486 54 4 3 67 3R:20611514-20611577 7 49.5 3372 FBgn0023097 953.03 20.03333333 30.79333333 0.051939603 2.470881864 1.607490799 2 2 2 0.1 dme-miR-305-3p 6mer3-8 ATGTGC 3R 20611711 20611716 + 3R_20611711_20611716_+ 0.793393521 0.954911909 0.874152715 0.114210756 bon FBtr0334639|FBtr0334637|FBtr0330043|FBtr0334638|FBtr0083912 20610835|20610835|20611057|20610835|20610835 20612540|20612540|20612540|20612540|20612540 3R + 20611600 20611735 3'utr bon FlyBase G44188.1 AAATTAAACAATGTGGCAAAGTTCTACCATCATTTCGAATTTGACATGTACGATATTTATTGACTATTGACCGCTAACCCCATCCATCGGTAGAATCTAATTAGGACGCTCATGTGCAGCTCCCTAAGCTCCTAAG 24 20611712 0.976847418 12 23 149 0.958333333 1.06069784 0.291666667 0 0 24 0 1 23 3R:20611600-20611735 6 bon FBtr0334638|FBtr0083912|FBtr0330043|FBtr0334639|FBtr0334637 20610835|20610835|20611057|20610835|20610835 20612540|20612540|20612540|20612540|20612540 ATGTGC 6mer3-8 dme-miR-305-3p 3R + 20611651 20611728 3'utr bon FlyBase G33388.1 GATATTTATTGACTATTGACCGCTAACCCCATCCATCGGTAGAATCTAATTAGGACGCTCATGTGCAGCTCCCTAAGC 15 20611711 0.702053639 7 12 84 0.833333333 1.301029996 0.125 0.4 0.625 15 4 0 20 3R:20611651-20611728 6 7.5 3373 FBgn0023097 953.03 20.03333333 30.79333333 0.007869637 0.37437604 0.243559212 -1 0 -0.5 0.1 dme-miR-79-3p 6mer2-7 AGCTTT 3R 20612000 20612005 + 3R_20612000_20612005_+ 1 0.999559653 0.999779826 0.000311339 bon FBtr0334639|FBtr0334637|FBtr0330043|FBtr0334638|FBtr0083912 20610835|20610835|20611057|20610835|20610835 20612540|20612540|20612540|20612540|20612540 3R + 20611987 20612018 3'utr bon FlyBase G44190.2 CCGACACAGAATCAGCTTTTCATATATATTTA 7 20611999 0.930856062 2 6 48 0.888888889 0.602059991 0 0.285714286 0.444444444 7 0 1 8 3R:20611987-20612018 6 bon FBtr0334638|FBtr0083912|FBtr0330043|FBtr0334639|FBtr0334637 20610835|20610835|20611057|20610835|20610835 20612540|20612540|20612540|20612540|20612540 AGCTTT 6mer2-7 dme-miR-79-3p 3R + 20611975 20612053 3'utr bon FlyBase G33391.1 ACATAAATATTTCCGACACAGAATCAGCTTTTCATATATATTTATATAAATATATATGTATGTATATCTTTAGCCGACC 7 20611998 0.976848981 4 7 59 1 1.146128036 0 0.571428571 0.785714286 7 0 0 14 3R:20611975-20612053 6 5 3374 FBgn0023097 953.03 20.03333333 30.79333333 0.005246425 0.249584027 0.162372808 1 2 1.5 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 3R 20620566 20620571 + 3R_20620566_20620571_+ 0.58607739 0.585369595 0.585723493 0.00050049 CG5466 FBtr0083913 20620354 20621269 3R + 20620531 20620588 3'utr CG5466 FlyBase G44193.1 GTTCAACACAAGACTTGATTTCACATTTTCCACATTTGACTGACCTTTAGGCATACAT 24 20620565 0.807187818 7 24 202 1 1.431363764 0.037037037 0.125 0.222222222 24 0 0 27 3R:20620531-20620588 6 CG5466 FBtr0083913 20620354 20621269 TTGACT 6mer3-8 dme-miR-1012-3p 3R + 20620525 20620588 3'utr CG5466 FlyBase G33394.1 TGCCATGTTCAACACAAGACTTGATTTCACATTTTCCACATTTGACTGACCTTTAGGCATACAT 24 20620566 0.741562548 12 22 201 0.948717949 1.267171728 0 0.375 0.615384615 24 1 1 37 3R:20620525-20620588 6 17.5 3375 FBgn0038815 41.00333333 1.706666667 2.616666667 0.42679457 10.25390625 6.687898089 1 0 0.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 20620700 20620707 + 3R_20620700_20620707_+ 0.613423874 0.579476971 0.596450423 0.024004083 CG5466 FBtr0083913|FBtr0083913|FBtr0083913 20620354|20620354|20620354 20621269|20621269|20621269 3R + 20620673 20620724 3'utr CG5466 FlyBase G44194.1 AAATTAGTTAAACAATTGGCAAAACGTCTGTGATATTTGAATTATGTTGGCA 162 20620699 0.870506695 8 154 1270 0.955665025 1.685741739 0.463054187 0.228395062 0.384236453 162 6 3 194 3R:20620673-20620724 8 CG5466 FBtr0083913|FBtr0083913|FBtr0083913 20620354|20620354|20620354 20621269|20621269|20621269 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 20620669 20620719 3'utr CG5466 FlyBase G33395.1 CGGCAAATTAGTTAAACAATTGGCAAAACGTCTGTGATATTTGAATTATGT 114 20620699 0.849975028 9 107 857 0.943037975 1.474216264 0.525316456 0.289473684 0.487341772 114 5 4 149 3R:20620669-20620719 8 136 3376 FBgn0038815 41.00333333 1.706666667 2.616666667 3.316803512 79.6875 51.97452229 1 1 1 0.1 dme-miR-190-5p 7mer-A1 CATATCA 3R 20620856 20620862 + 3R_20620856_20620862_+ 0.780455944 0.746327634 0.763391789 0.024132352 CG5466 FBtr0083913 20620354 20621269 3R + 20620808 20620861 3'utr CG5466 FlyBase G44195.1 CTAAGCATATATTCTTAGCCGTTCTCGTGCAATCGACGACTTTTCGCCCATATC 13 20620850 0.979903722 5 13 90 1 1.230448921 0 0.153846154 0.352941176 13 0 0 17 3R:20620808-20620861 6 CG5466 FBtr0083913 20620354 20621269 CATATCA 7mer-A1 dme-miR-190-5p 3R + 20620822 20620862 3'utr CG5466 FlyBase G33396.1 TTAGCCGTTCTCGTGCAATCGACGACTTTTCGCCCATATCA 10 20620850 0.851397029 3 10 62 1 1.301029996 0 0.6 0.8 10 0 0 20 3R:20620822-20620862 7 10 3377 FBgn0038815 41.00333333 1.706666667 2.616666667 0.243882611 5.859375 3.821656051 6 6 6 0.1 dme-miR-14-3p 7mer-A1 AGACTGA 3R 20627229 20627235 + 3R_20627229_20627235_+ 0.823349209 0.823331846 0.823340527 1.23E-05 H FBtr0083914|FBtr0083916|FBtr0083917|FBtr0083915 20626787|20626787|20626787|20626787 20628915|20627251|20628915|20627251 3R + 20627212 20627251 3'utr H FlyBase G44217.1 AAACATTTCCTTGAAACAGACTGAACCTGAATTTTTTTAG 14 20627220 0.790730145 4 12 91 0.857142857 1.079181246 0.071428571 0 0 14 2 0 12 3R:20627212-20627251 7 H FBtr0083916|FBtr0083914|FBtr0083915|FBtr0083917 20626787|20626787|20626787|20626787 20627251|20628915|20627251|20628915 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 20627216 20627246 3'utr H FlyBase G33409.1 ATTTCCTTGAAACAGACTGAACCTGAATTTT 15 20627233 0.804078651 5 14 79 0.956521739 1.342422681 0.086956522 0.4 0.608695652 15 1 0 22 3R:20627216-20627246 7 14.5 3378 FBgn0001169 717.03 17.48666667 26.88666667 0.020222306 0.829203202 0.539300769 9 -4 2.5 0.1 dme-miR-305-5p 6mer2-7 GTACAA 3R 20627933 20627938 + 3R_20627933_20627938_+ 0.991053604 0.999839726 0.995446665 0.006212711 H FBtr0083914|FBtr0083917 20626787|20626787 20628915|20628915 3R + 20627921 20627964 3'utr H FlyBase G44219.1 AAACCGGAACTCGTACAACTGAAACTGATACAAATAAAAAACAT 32 20627940 0.865847874 3 32 120 1 1.579783597 0.026315789 0.15625 0.289473684 32 0 0 38 3R:20627921-20627964 6 H FBtr0083914|FBtr0083917 20626787|20626787 20628915|20628915 GTACAA 6mer2-7 dme-miR-305-5p 3R + 20627916 20627961 3'utr H FlyBase G33410.1 ATTTCAAACCGGAACTCGTACAACTGAAACTGATACAAATAAAAAA 13 20627941 0.952861705 4 11 49 0.866666667 1.113943352 0.066666667 0.153846154 0.266666667 13 2 0 13 3R:20627916-20627961 6 21.5 3379 FBgn0001169 717.03 17.48666667 26.88666667 0.029984798 1.229508197 0.799652864 -7 -8 -7.5 0.1 dme-miR-12-5p 6mer3-8 AATACT 3R 20628857 20628862 + 3R_20628857_20628862_+ 0.999356729 0.9993807 0.999368714 1.70E-05 H FBtr0083914|FBtr0083917 20626787|20626787 20628915|20628915 3R + 20628837 20628880 3'utr H FlyBase G44223.1 AGGTATATATACTGCAACTGAATACTTGATGTCAATAAAAACTT 9 20628862 0.960188034 3 9 59 1 1.041392685 0.090909091 0.222222222 0.363636364 9 0 0 11 3R:20628837-20628880 6 H FBtr0083914|FBtr0083917 20626787|20626787 20628915|20628915 AATACT 6mer3-8 dme-miR-12-5p 3R + 20628837 20628879 3'utr H FlyBase G33412.1 AGGTATATATACTGCAACTGAATACTTGATGTCAATAAAAACT 10 20628862 0.733194985 2 8 64 0.75 0.954242509 0 0.2 0.333333333 10 3 0 9 3R:20628837-20628879 6 9 3380 FBgn0001169 717.03 17.48666667 26.88666667 0.012551776 0.51467785 0.334738408 -5 -5 -5 0.1 dme-miR-317-5p 6mer3-8 GTATCC 3R 20629292 20629297 - 3R_20629292_20629297_- 0.999999808 0.99999884 0.999999324 7.07E-07 Pi3K92E FBtr0083941|FBtr0083940|FBtr0334643 20628970|20628970|20628970 20629746|20629746|20629746 3R - 20629260 20629359 3'utr Pi3K92E FlyBase G52869.1 ATTCATTTGTTGTTTGAACACCCCCCCGCACATGCACATTGGCGCATGAACGTGCAAAAATTGTATCCTATTATGCTATATTAATTTAAGAGACATTAAC 92 20629298 0.986139433 13 90 754 0.983193277 2.068185862 0.529411765 0.260869565 0.428571429 92 2 0 117 3R:20629260-20629359 6 Pi3K92E FBtr0334643|FBtr0083940|FBtr0083941 20628970|20628970|20628970 20629746|20629746|20629746 GTATCC 6mer3-8 dme-miR-317-5p 3R - 20629268 20629346 3'utr Pi3K92E FlyBase G39914.1 TTGAACACCCCCCCGCACATGCACATTGGCGCATGAACGTGCAAAAATTGTATCCTATTATGCTATATTAATTTAAGAG 41 20629298 0.988292215 9 36 333 0.878787879 1.286306739 0.424242424 0.414634146 0.636363636 41 6 2 58 3R:20629268-20629346 6 57.5 3381 FBgn0015279 1152.983333 31.04666667 47.44333333 0.049870625 1.852050676 1.211972177 1 1 1 0.1 dme-miR-970-3p 6mer3-8 TCTTAT 3R 20629400 20629405 - 3R_20629400_20629405_- 1 1 1 0 Pi3K92E FBtr0083941|FBtr0083940|FBtr0334643 20628970|20628970|20628970 20629746|20629746|20629746 3R - 20629364 20629413 3'utr Pi3K92E FlyBase G52870.1 CCGCCCCCTCTTATACAGTGATTTTTGATCCTAAAAATTGTTTTGTTGTC 7 20629400 0.990739511 4 7 74 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 3R:20629364-20629413 6 Pi3K92E FBtr0334643|FBtr0083940|FBtr0083941 20628970|20628970|20628970 20629746|20629746|20629746 TCTTAT 6mer3-8 dme-miR-970-3p 3R - 20629375 20629437 3'utr Pi3K92E FlyBase G39915.1 TTGTAACTGTAATCATTTATCGCCCCGCCCCCTCTTATACAGTGATTTTTGATCCTAAAAATT 9 20629390 0.983713444 6 8 69 1 1.041392685 0.272727273 0.222222222 0.363636364 9 0 0 11 3R:20629375-20629437 6 6 3382 FBgn0015279 1152.983333 31.04666667 47.44333333 0.005203891 0.193257462 0.126466662 -5 -15 -10 0.1 dme-bantam-3p 7mer-A1 GATCTCA 3R 20644139 20644145 + 3R_20644139_20644145_+ 0.823349562 0.823349562 0.823349562 0 Lrrk FBtr0334641|FBtr0334640|FBtr0112788 20644133|20644133|20644133 20644279|20644279|20644279 3R + 20644091 20644157 stop_codon Lrrk FlyBase G44228.1 ATCACATTCATTGCCTGCTGTGGCGCGCCAAGCACTGGACCTAAATTCGATCTCATTCAAAATATTT 52 20644136 0.698673896 10 50 359 0.966101695 1.755874856 0.084745763 0.115384615 0.220338983 52 2 0 57 3R:20644091-20644157 7 Lrrk FBtr0334641|FBtr0334640|FBtr0112788 20644133|20644133|20644133 20644279|20644279|20644279 GATCTCA 7mer-A1 dme-bantam-3p 3R + 20644093 20644170 stop_codon Lrrk FlyBase G33415.1 CACATTCATTGCCTGCTGTGGCGCGCCAAGCACTGGACCTAAATTCGATCTCATTCAAAATATTTGTTGACGTATTTA 45 20644136 0.981245242 7 44 317 0.984615385 1.806179974 0.015384615 0.355555556 0.553846154 45 1 0 64 3R:20644093-20644170 7 44.5 3383 FBgn0038816 197.3233333 3.033333333 4.62 0.225518185 14.67032967 9.632034632 3 3 3 0.1 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 20757447 20757454 - 3R_20757447_20757454_- 0.620004165 0.628167339 0.624085752 0.005772183 CG31195 FBtr0302188 20757267 20758623 3R - 20757249 20757605 3'utr CG31195 FlyBase G52894.1 TGTCCGCTTTTGGTTTTGTTTCTGGAAGTCTTGCCCCCCTGAACATTCCGCAATTTATTTGTAGATCAGTACAAAGCAATGAGAAGAAATCGAATGTGTAAATTGTGCCTTAAACTGAATATTTGTAACACAACAGACTATATCAAAAACATCCGTCCAATGAGTAGTCTACTTTGTATTATGTATCTACATATCTGAATTAGTGATAAGTGCCTTGAGACAAAATCGAATAACTTTTACAACCTGCTTGAGTAGTCTAATGTCTAGAATTTAAGTGTCTTATAATTTTAAAGCAATCCATCCATATATACAATGTTCAAATATATGATTTTGTAGTAAAAACCCCATTGACTTACC 206 20757445 0.981183262 56 192 1383 0.936170213 1.643452676 0.123404255 0.126213592 0.234042553 206 11 4 220 3R:20757249-20757605 8 CG31195 FBtr0302188 20757267 20758623 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R - 20757282 20757525 3'utr CG31195 FlyBase G39936.1 GAGAAGAAATCGAATGTGTAAATTGTGCCTTAAACTGAATATTTGTAACACAACAGACTATATCAAAAACATCCGTCCAATGAGTAGTCTACTTTGTATTATGTATCTACATATCTGAATTAGTGATAAGTGCCTTGAGACAAAATCGAATAACTTTTACAACCTGCTTGAGTAGTCTAATGTCTAGAATTTAAGTGTCTTATAATTTTAAAGCAATCCATCCATATATACAATGTTCAAATAT 161 20757445 0.978751233 42 146 1002 0.91025641 1.425289616 0.145299145 0.347826087 0.551282051 161 14 7 213 3R:20757282-20757525 8 67 3384 FBgn0051195 435.6633333 13.05 19.87666667 0.153788476 5.134099617 3.370786517 -9 -9 -9 0.1 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 20758586 20758593 - 3R_20758586_20758593_- 0.631134863 0.631134878 0.63113487 0 CG31195 FBtr0302188 20757267 20758623 3R - 20758559 20758621 3'utr CG31195 FlyBase G52896.2 ACCGCACGCCAAATAACTAACGCAAACTTCCGTCCAAACAAAACTCACATCAAATCTCTCCAC 3573 20758594 0.791587169 7 3525 11201 0.986995516 2.301227357 0.010762332 0.192835153 0.353363229 3573 37 21 4402 3R:20758559-20758621 8 CG31195 FBtr0302188 20757267 20758623 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R - 20758559 20758621 3'utr CG31195 FlyBase G39937.1 ACCGCACGCCAAATAACTAACGCAAACTTCCGTCCAAACAAAACTCACATCAAATCTCTCCAC 2319 20758594 0.786185181 10 2292 6947 0.992256637 2.776701184 0.008573009 0.385942216 0.60619469 2319 23 5 3588 3R:20758559-20758621 8 2907 3385 FBgn0051195 435.6633333 13.05 19.87666667 6.67258357 222.7586207 146.2518866 1 1 1 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 3R 20807095 20807100 + 3R_20807095_20807100_+ 0.999937331 0.999950155 0.999943743 9.12E-06 Syp FBtr0083961|FBtr0334713|FBtr0083963|FBtr0083959 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 3R + 20807011 20807119 3'utr Syp FlyBase G44262.1 AGATACATATTTGAAAGCACATATAGACAGACAGACGAGATCAGGCTCAGAGGCGCGTTGAAAAGCAAAGCTTAGTGAGGAACATTGACTGACAAAGTAAAAAGTAAAC 88 20807095 0.725088587 12 80 316 0.927927928 1.234685974 0.261261261 0.193181818 0.36036036 88 3 5 103 3R:20807011-20807119 6 Syp FBtr0083963|FBtr0083959|FBtr0083961|FBtr0334713 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 TTGACT 6mer3-8 dme-miR-1012-3p 3R + 20807019 20807122 3'utr Syp FlyBase G33444.1 ATTTGAAAGCACATATAGACAGACAGACGAGATCAGGCTCAGAGGCGCGTTGAAAAGCAAAGCTTAGTGAGGAACATTGACTGACAAAGTAAAAAGTAAACAAA 63 20807095 0.945780817 10 58 239 0.926315789 1.166331422 0.105263158 0.365079365 0.578947368 63 2 5 88 3R:20807019-20807122 6 69.5 3386 FBgn0038826 3810.263333 58.4 89.27 0.018240209 1.190068493 0.778537023 0 0 0 0.1 dme-bantam-3p 7mer-A1 GATCTCA 3R 20807973 20807979 + 3R_20807973_20807979_+ 0.823349527 0.823349494 0.82334951 0 Syp FBtr0083961|FBtr0334713|FBtr0083963|FBtr0083959 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 3R + 20807925 20807993 3'utr Syp FlyBase G44267.1 TTGGTTGAAGACCGAAGAACCCTGTCGTTTACGTTTCCGCTATTGCTAGATCTCAAGTAAAGCAAAAAG 69 20807968 0.982791842 9 65 489 0.943181818 1.919078092 0.147727273 0.217391304 0.386363636 69 5 0 83 3R:20807925-20807993 7 Syp FBtr0083963|FBtr0083959|FBtr0083961|FBtr0334713 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 GATCTCA 7mer-A1 dme-bantam-3p 3R + 20807909 20807995 3'utr Syp FlyBase G33447.1 TCGACAACAAAATTGTTTGGTTGAAGACCGAAGAACCCTGTCGTTTACGTTTCCGCTATTGCTAGATCTCAAGTAAAGCAAAAAGTT 64 20807968 0.982620701 8 60 452 0.936842105 1.949390007 0.157894737 0.375 0.578947368 64 6 0 89 3R:20807909-20807995 7 64.5 3387 FBgn0038826 3810.263333 58.4 89.27 0.016927964 1.104452055 0.722527165 5 5 5 0.1 dme-miR-92b-3p 7mer-m1 TGCAATT 3R 20808650 20808656 + 3R_20808650_20808656_+ 0.765302637 0.764917315 0.765109976 0.000272448 Syp FBtr0083961|FBtr0334713|FBtr0083963|FBtr0083959 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 3R + 20808622 20808674 3'utr Syp FlyBase G44270.1 TTTTTTGAGAGAGAGCATTTCACGCAACTGCAATTGATTGTTGCCTTCGAAAA 16 20808662 0.703037512 6 14 115 0.909090909 1.301029996 0.136363636 0.3125 0.5 16 2 0 20 3R:20808622-20808674 7 Syp FBtr0083963|FBtr0083959|FBtr0083961|FBtr0334713 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 TGCAATT 7mer-m1 dme-miR-92b-3p 3R + 20808619 20808673 3'utr Syp FlyBase G33450.1 TTTTTTTTTGAGAGAGAGCATTTCACGCAACTGCAATTGATTGTTGCCTTCGAAA 10 20808640 0.720883064 7 10 73 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 3R:20808619-20808673 7 11 3388 FBgn0038826 3810.263333 58.4 89.27 0.00288694 0.188356164 0.123221687 -12 10 -1 0.1 dme-miR-986-5p 6mer3-8 ATTCGA 3R 20808912 20808917 + 3R_20808912_20808917_+ 0.626428972 0.829869829 0.7281494 0.143854369 Syp FBtr0083961|FBtr0334713|FBtr0083963|FBtr0083959 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 3R + 20808899 20808942 3'utr Syp FlyBase G44272.1 AACGATTTGTTTAATTCGATAACTGTACTGATTTTATATTGTTT 26 20808931 0.747317201 10 26 243 1 1.531478917 0.058823529 0.230769231 0.411764706 26 0 0 34 3R:20808899-20808942 6 Syp FBtr0083963|FBtr0083959|FBtr0083961|FBtr0334713 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 ATTCGA 6mer3-8 dme-miR-986-5p 3R + 20808910 20808977 3'utr Syp FlyBase G33451.1 TAATTCGATAACTGTACTGATTTTATATTGTTTTAAATTTGTAATTTAATTTGTAAGTTTTTATTGTT 31 20808931 0.685853445 11 28 329 0.893617021 1.62324929 0 0.35483871 0.574468085 31 5 0 42 3R:20808910-20808977 6 25 3389 FBgn0038826 3810.263333 58.4 89.27 0.006561226 0.428082192 0.280049289 -19 -19 -19 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 20809721 20809726 + 3R_20809721_20809726_+ 0.80404612 0.883962765 0.844004442 0.056509641 Syp FBtr0083961|FBtr0334713|FBtr0083963|FBtr0083959 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 3R + 20809664 20809803 3'utr Syp FlyBase G44279.1 AATTGCAAACTGCGCATGGAAACTGAGCGAAAAAAATGAAAAACTTTACATGAATTGTGATGATGCAAAGGCAAGATTTAATCATAATTACTAAATCTATATATACAGTAAATATATATATCTTTCTCTATAAATATATA 110 20809718 0.979907498 14 105 744 0.966216216 1.854306042 0.398648649 0.254545455 0.445945946 110 4 1 143 3R:20809664-20809803 6 Syp FBtr0083963|FBtr0083959|FBtr0083961|FBtr0334713 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R + 20809651 20809754 3'utr Syp FlyBase G33455.1 AAGGTGGACAAAAAATTGCAAACTGCGCATGGAAACTGAGCGAAAAAAATGAAAAACTTTACATGAATTGTGATGATGCAAAGGCAAGATTTAATCATAATTAC 77 20809718 0.880452781 16 71 522 0.925233645 1.393575203 0.448598131 0.298701299 0.495327103 77 5 3 99 3R:20809651-20809754 6 82 3390 FBgn0038826 3810.263333 58.4 89.27 0.021520822 1.404109589 0.918561667 3 3 3 0.1 dme-miR-14-3p 6mer2-7 AGACTG 3R 20809865 20809870 + 3R_20809865_20809870_+ 0.999999997 0.999999999 0.999999998 0 Syp FBtr0083961|FBtr0334713|FBtr0083963|FBtr0083959 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 3R + 20809809 20809900 3'utr Syp FlyBase G44280.1 GAGTATATAATGTATATGTAGGCGTAGGAGTGTATAATCTAACTTTACTTTTAAACAGACTGCGTACGTATTAAAAATTTTTAAAATTAATT 53 20809858 0.740886318 15 51 411 0.942028986 1.511883361 0.115942029 0.188679245 0.376811594 53 3 1 65 3R:20809809-20809900 6 Syp FBtr0083963|FBtr0083959|FBtr0083961|FBtr0334713 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 AGACTG 6mer2-7 dme-miR-14-3p 3R + 20809819 20809887 3'utr Syp FlyBase G33456.1 TGTATATGTAGGCGTAGGAGTGTATAATCTAACTTTACTTTTAAACAGACTGCGTACGTATTAAAAATT 18 20809857 0.984098653 7 17 138 0.956521739 1.041392685 0.173913043 0.222222222 0.391304348 18 0 1 22 3R:20809819-20809887 6 27 3391 FBgn0038826 3810.263333 58.4 89.27 0.007086124 0.462328767 0.302453232 7 8 7.5 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 3R 20819758 20819764 - 3R_20819758_20819764_- 0.782567261 0.781464448 0.782015855 0.000779868 CG17271 FBtr0083993 20819624 20820192 3R - 20819752 20819819 3'utr CG17271 FlyBase G52914.1 AAGCGCGACTTTAGAGCAGCAAAAAAAACAGACTGATTGTGTAAACGTTTGTTTTGTACAAAAAGAAA 17 20819783 0.899680616 5 15 88 0.857142857 0.954242509 0.047619048 0.235294118 0.380952381 17 2 1 18 3R:20819752-20819819 7 CG17271 FBtr0083993 20819624 20820192 GTACAAA 7mer-A1 dme-miR-305-5p 3R - 20819749 20819795 3'utr CG17271 FlyBase G39947.1 AAAACAGACTGATTGTGTAAACGTTTGTTTTGTACAAAAAGAAAATG 7 20819767 0.97681865 5 7 48 1 1.176091259 0 0.285714286 0.666666667 7 0 0 15 3R:20819749-20819795 7 4 3392 FBgn0038829 298.4266667 26.90333333 40.93666667 0.013403628 0.148680461 0.097711913 19 3 11 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3R 20820025 20820031 - 3R_20820025_20820031_- 0.808818829 0.808795508 0.808807168 1.65E-05 CG17271 FBtr0083993|FBtr0083993 20819624|20819624 20820192|20820192 3R - 20819987 20820050 3'utr CG17271 FlyBase G52917.1 GATAAATTTGAATGAAATTTACTTAACATGCTGCAAGCATTCCAATCGGAGAACTTCATTGAAC 13 20820033 0.980051835 5 13 93 1 1.230448921 0.647058824 0.230769231 0.411764706 13 0 0 17 3R:20819987-20820050 7 CG17271 FBtr0083993|FBtr0083993 20819624|20819624 20820192|20820192 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3R - 20820009 20820041 3'utr CG17271 FlyBase G39950.1 GAATGAAATTTACTTAACATGCTGCAAGCATTC 7 20820033 0.865739911 2 7 48 1 1 0.6 0.285714286 0.5 7 0 0 10 3R:20820009-20820041 7 9 3393 FBgn0038829 298.4266667 26.90333333 40.93666667 0.030158163 0.334531037 0.219851804 2 2 2 0.1 dme-miR-190-5p 6mer3-8 ACATAT 3R 20839536 20839541 + 3R_20839536_20839541_+ 0.999998749 0.999999997 0.999999373 9.19E-07 Synd FBtr0083966|FBtr0334724|FBtr0334725 20839396|20839396|20839396 20839856|20840118|20840118 3R + 20839511 20839550 3'utr Synd FlyBase G44297.1 AGAGTCGTTGATGAAAAATTACCATACATATGTATTAGAA 6 20839539 0.979478684 4 6 38 1 1 0 0.5 0.7 6 0 0 10 3R:20839511-20839550 6 Synd FBtr0083966|FBtr0334724|FBtr0334725 20839396|20839396|20839396 20839856|20840118|20840118 ACATAT 6mer3-8 dme-miR-190-5p 3R + 20839524 20839576 3'utr Synd FlyBase G33472.1 AAAAATTACCATACATATGTATTAGAAATTGTTATGAGCAATCGCTTGCACTA 5 20839538 0.986221132 5 5 34 1 0.698970004 0.2 0 0 5 0 0 5 3R:20839524-20839576 6 4 3394 FBgn0053094 1119.136667 61.56 93.86 0.003574184 0.064977258 0.042616663 -3 -2 -2.5 0.1 dme-miR-980-3p 6mer2-7 GCAGCT 3R 20844802 20844807 + 3R_20844802_20844807_+ 0.999790426 0.999906863 0.999848644 8.24E-05 CG15695 FBtr0083967 20844628 20844981 3R + 20844732 20844825 3'utr CG15695 FlyBase G44305.2 CTTATCACTGGGGTGGATCTGTGGCCGGATGGTTAGTTGCTGGCAACTACTACTTTTGGCAAACGTAATTGCAGCTCGGCAAATTGTGCGAATG 48 20844800 0.810380064 10 44 316 0.943396226 1.698970004 0.528301887 0.104166667 0.188679245 48 3 0 50 3R:20844732-20844825 6 CG15695 FBtr0083967 20844628 20844981 GCAGCT 6mer2-7 dme-miR-980-3p 3R + 20844763 20844825 3'utr CG15695 FlyBase G33480.1 GTTAGTTGCTGGCAACTACTACTTTTGGCAAACGTAATTGCAGCTCGGCAAATTGTGCGAATG 10 20844800 0.967341196 4 10 60 1 1.278753601 0.736842105 0.7 0.842105263 10 0 0 19 3R:20844763-20844825 6 23 3395 FBgn0038832 423.3333333 18.62 28.26333333 0.054330709 1.235230934 0.813775209 2 2 2 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3R 20929150 20929156 + 3R_20929150_20929156_+ 0.661603628 0.661606047 0.661604838 1.70E-06 hdly FBtr0113257 20929000 20929213 3R + 20929131 20929179 3'utr hdly FlyBase G44316.1 TATTAAATAATAAATAACTTCTAGTCGGCTTTGCCAGTGGGGCTGGCCC 15 20929149 0.77883771 4 14 126 0.933333333 1.146128036 0.2 0 0 15 1 0 14 3R:20929131-20929179 7 hdly FBtr0113257 20929000 20929213 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 20929136 20929175 3'utr hdly FlyBase G33493.1 AATAATAAATAACTTCTAGTCGGCTTTGCCAGTGGGGCTG 10 20929149 0.975297769 2 10 80 1 1.041392685 0.272727273 0.1 0.181818182 10 0 0 11 3R:20929136-20929175 7 12.5 3396 FBgn0038842 553.6666667 45.08666667 69.06666667 0.022576761 0.277243827 0.180984556 1 1 1 0.1 dme-miR-34-5p 6mer2-7 ACTGCC 3R 20973696 20973701 + 3R_20973696_20973701_+ 0.999876013 0.999905095 0.999890554 2.06E-05 Atpalpha FBtr0089512 20966747 20975284 3R + 20973678 20973728 3'utr Atpalpha FlyBase G44338.1 TGGCCGCGTTCCTCTCATACTGCCCGGGCATGGAGAAGGGTCTGCGCATGT 5 20973695 0.96780579 3 5 27 1 0.698970004 0.2 0 0 5 0 0 5 3R:20973678-20973728 6 Atpalpha FBtr0089512 20966747 20975284 ACTGCC 6mer2-7 dme-miR-34-5p 3R + 20973664 20973709 3'utr Atpalpha FlyBase G33510.1 CTTTGAAACCGTGCTGGCCGCGTTCCTCTCATACTGCCCGGGCATG 5 20973695 0.974998679 3 4 26 0.833333333 0.698970004 0.666666667 0.2 0.333333333 5 1 0 5 3R:20973664-20973709 6 4 3397 FBgn0002921 3927.986667 105.41 160.63 0.001018333 0.037947064 0.024901949 1 1 1 0.1 dme-miR-190-5p 6mer3-8 ACATAT 3R 20974168 20974173 + 3R_20974168_20974173_+ 0.999997139 0.999751592 0.999874366 0.000173595 Atpalpha FBtr0300191|FBtr0333324|FBtr0089513|FBtr0089511|FBtr0089510|FBtr0089512|FBtr0089509|FBtr0089514|FBtr0333325|FBtr0089515|FBtr0089516 20973930|20973930|20973930|20973930|20973930|20966747|20973930|20973930|20973930|20973930|20973930 20975284|20976239|20975284|20974337|20974337|20975284|20975284|20975284|20974337|20975284|20975284 3R + 20974132 20974187 3'utr Atpalpha FlyBase G44342.1 CAGCAACAGCTACGTCTACAACAAGCTACAGCAAGAACATATTACAATATATTTTA 27 20974173 0.886372744 8 19 124 0.657142857 1.06069784 0.028571429 0.259259259 0.428571429 27 11 1 23 3R:20974132-20974187 6 Atpalpha FBtr0089516|FBtr0089511|FBtr0089515|FBtr0333325|FBtr0089514|FBtr0089509|FBtr0089512|FBtr0089510|FBtr0089513|FBtr0333324|FBtr0300191 20973930|20973930|20973930|20973930|20973930|20973930|20966747|20973930|20973930|20973930|20973930 20975284|20974337|20975284|20974337|20975284|20975284|20975284|20974337|20975284|20976239|20975284 ACATAT 6mer3-8 dme-miR-190-5p 3R + 20974154 20974191 3'utr Atpalpha FlyBase G33513.1 AAGCTACAGCAAGAACATATTACAATATATTTTATTTT 14 20974174 0.624678223 4 11 71 0.807692308 1.322219295 0 0.571428571 0.769230769 14 5 0 21 3R:20974154-20974191 6 20 3398 FBgn0002921 3927.986667 105.41 160.63 0.005091667 0.189735319 0.124509743 -5 -6 -5.5 0.1 dme-miR-33-5p 7mer-A1 AATGCAA 3R 20974230 20974236 + 3R_20974230_20974236_+ 0.782735203 0.782766887 0.782751045 2.24E-05 Atpalpha FBtr0300191|FBtr0333324|FBtr0089513|FBtr0089511|FBtr0089510|FBtr0089512|FBtr0089509|FBtr0089514|FBtr0333325|FBtr0089515|FBtr0089516 20973930|20973930|20973930|20973930|20973930|20966747|20973930|20973930|20973930|20973930|20973930 20975284|20976239|20975284|20974337|20974337|20975284|20975284|20975284|20974337|20975284|20975284 3R + 20974204 20974266 3'utr Atpalpha FlyBase G44343.1 ATTTAAAGTAAACGAGGATAAACAAAAATGCAAGCGATAATTATTTTAAACGTTAAGTAAATT 372 20974232 0.983984346 7 365 1425 0.98206278 2.340444115 0.044843049 0.161290323 0.30044843 372 7 1 438 3R:20974204-20974266 7 Atpalpha FBtr0089516|FBtr0089511|FBtr0089515|FBtr0333325|FBtr0089514|FBtr0089509|FBtr0089512|FBtr0089510|FBtr0089513|FBtr0333324|FBtr0300191 20973930|20973930|20973930|20973930|20973930|20973930|20966747|20973930|20973930|20973930|20973930 20975284|20974337|20975284|20974337|20975284|20975284|20975284|20974337|20975284|20976239|20975284 AATGCAA 7mer-A1 dme-miR-33-5p 3R + 20974204 20974262 3'utr Atpalpha FlyBase G33514.1 ATTTAAAGTAAACGAGGATAAACAAAAATGCAAGCGATAATTATTTTAAACGTTAAGTA 201 20974232 0.969971875 9 193 726 0.96742671 2.171726454 0.039087948 0.39800995 0.605863192 201 9 1 297 3R:20974204-20974262 7 282.5 3399 FBgn0002921 3927.986667 105.41 160.63 0.071919796 2.680011384 1.758700118 -2 -2 -2 0.1 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 21051692 21051698 - 3R_21051692_21051698_- 0.82243459 0.814962284 0.818698437 0.005283714 Mvl FBtr0301478|FBtr0089521|FBtr0330046|FBtr0301477 21051560|21051381|21051381|21051381 21052187|21052187|21052058|21052187 3R - 21051650 21051724 3'utr Mvl FlyBase G52955.1 AAATAGTTTAAAAGTCTAATAATAAGGCTGTGAAATTAACTGAGTGTAAATCGAACCACTTCAATTGTCTAATCG 75 21051703 0.986650727 8 62 532 0.84375 1.431363764 0.041666667 0.213333333 0.385416667 75 13 2 81 3R:21051650-21051724 7 Mvl FBtr0330046|FBtr0301477|FBtr0089521|FBtr0301478 21051381|21051381|21051381|21051560 21052058|21052187|21052187|21052187 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R - 21051679 21051724 3'utr Mvl FlyBase G39979.1 AAATAGTTTAAAAGTCTAATAATAAGGCTGTGAAATTAACTGAGTG 46 21051706 0.698837865 7 38 318 0.825396825 1.414973348 0 0.282608696 0.476190476 46 10 1 52 3R:21051679-21051724 7 59.5 3400 FBgn0011672 484.1233333 17.95 27.56 0.122902566 3.314763231 2.15892598 5 8 6.5 0.1 dme-miR-968-5p 7mer-A1 CTACTTA 3R 21051806 21051812 - 3R_21051806_21051812_- 0.437395288 0.585307597 0.511351443 0.10458979 Mvl FBtr0301478|FBtr0089521|FBtr0330046|FBtr0301477 21051560|21051381|21051381|21051381 21052187|21052187|21052058|21052187 3R - 21051788 21051883 3'utr Mvl FlyBase G52956.1 AGGACCTGGGATCAGTGTAACACAATAACTAAATTCTAATTGAAAAGCGTACCAAAAACGGTTCATAAACTCTACTTACTGAGAAGCGCGAAGAGA 15 21051808 0.952626043 7 15 62 1 1.255272505 0.166666667 0.2 0.333333333 15 0 0 18 3R:21051788-21051883 7 Mvl FBtr0330046|FBtr0301477|FBtr0089521|FBtr0301478 21051381|21051381|21051381|21051560 21052058|21052187|21052187|21052187 CTACTTA 7mer-A1 dme-miR-968-5p 3R - 21051770 21051849 3'utr Mvl FlyBase G39980.1 TCTAATTGAAAAGCGTACCAAAAACGGTTCATAAACTCTACTTACTGAGAAGCGCGAAGAGACAAAATAGAAAATCCATG 13 21051834 0.931637713 6 12 47 1 1.301029996 0.05 0.384615385 0.6 13 0 0 20 3R:21051770-21051849 7 6 3401 FBgn0011672 484.1233333 17.95 27.56 0.012393536 0.334261838 0.217706821 -4 22 9 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 3R 21054752 21054757 - 3R_21054752_21054757_- 0.999655213 0.999991749 0.999823481 0.000237941 Mvl FBtr0306350 21054646 21054959 3R - 21054740 21054782 5'utr Mvl FlyBase G52963.1 CGATGGGGTCCTATAGATTATAAGCTTGACTGTGGTAAGTCTT 13 21054750 0.896236523 4 12 117 0.923076923 0.77815125 0 0 0 13 0 1 12 3R:21054740-21054782 6 Mvl FBtr0306350 21054646 21054959 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 21054747 21054773 5'utr Mvl FlyBase G39985.1 CCTATAGATTATAAGCTTGACTGTGGT 8 21054750 0.808036018 2 7 59 0.928571429 1.113943352 0 0.25 0.571428571 8 1 0 13 3R:21054747-21054773 6 10 3402 FBgn0011672 484.1233333 17.95 27.56 0.020655893 0.557103064 0.362844702 -7 -7 -7 0.1 dme-miR-283-5p 8mer-A1 TGATATTA 3R 21054906 21054913 - 3R_21054906_21054913_- 0.543269491 0.547358272 0.545313881 0.002891218 Mvl FBtr0306350 21054646 21054959 3R - 21054857 21054933 5'utr Mvl FlyBase G52965.1 CACTCCCCCACACACCCTTGTGATATTAACACTAAATCACACGCTTAACACTACTAACACGTACCTAGTAGGGCTCT 10 21054916 0.964914364 4 9 53 0.9 0.954242509 0.1 0 0 10 1 0 9 3R:21054857-21054933 8 Mvl FBtr0306350 21054646 21054959 TGATATTA 8mer-A1 dme-miR-283-5p 3R - 21054904 21054935 5'utr Mvl FlyBase G39986.1 CACACTCCCCCACACACCCTTGTGATATTAAC 5 21054916 0.834775427 2 5 29 1 0.84509804 0 0.4 0.571428571 5 0 0 7 3R:21054904-21054935 8 4.5 3403 FBgn0011672 484.1233333 17.95 27.56 0.009295152 0.250696379 0.163280116 3 3 3 0.1 dme-miR-12-5p 6mer3-8 AATACT 3R 21062155 21062160 - 3R_21062155_21062160_- 0.999998436 1 0.999999218 1.13E-06 Cortactin FBtr0306347|FBtr0306348|FBtr0306349|FBtr0084039 21061678|21061678|21061678|21061678 21062225|21062225|21062225|21062225 3R - 21062138 21062169 3'utr Cortactin FlyBase G52978.1 GAAAACGATAATACTGATGTTGGATTATAAAC 11 21062152 0.831483943 2 10 80 0.9375 0.875061263 0.3125 0.363636364 0.5625 11 0 1 15 3R:21062138-21062169 6 Cortactin FBtr0084039|FBtr0306349|FBtr0306348|FBtr0306347 21061678|21061678|21061678|21061678 21062225|21062225|21062225|21062225 AATACT 6mer3-8 dme-miR-12-5p 3R - 21062136 21062169 3'utr Cortactin FlyBase G39996.1 GAAAACGATAATACTGATGTTGGATTATAAACCA 6 21062152 0.891972235 2 6 43 1 1.079181246 0.25 0.666666667 0.833333333 6 0 0 12 3R:21062136-21062169 6 8.5 3404 FBgn0025865 2939.633333 150.03 230.9266667 0.002891517 0.056655336 0.036808222 -8 -8 -8 0.1 dme-miR-92b-3p 8mer-A1 GTGCAATA 3R 21070529 21070536 + 3R_21070529_21070536_+ 0.628915972 0.628916026 0.628915999 0 AnxB9 FBtr0089517 21070330 21070539 3R + 21070499 21070552 3'utr-intron AnxB9 FlyBase G44364.1 AATCTACAAAACGCTTAGTATTTTCCCTCTGTGCAATAACGTCTAACGTTCAAC 58 21070522 0.966970556 9 55 499 0.974683544 1.58546073 0.17721519 0.293103448 0.481012658 58 1 1 77 3R:21070499-21070552 8 AnxB9 FBtr0089517 21070330 21070539 GTGCAATA 8mer-A1 dme-miR-92b-3p 3R + 21070508 21070550 3'utr-intron AnxB9 FlyBase G33526.1 AACGCTTAGTATTTTCCCTCTGTGCAATAACGTCTAACGTTCA 46 21070534 0.836817315 7 43 425 0.9375 1.77815125 0.234375 0.326086957 0.515625 46 4 0 60 3R:21070508-21070550 8 47.5 3405 FBgn0000083 3186.973333 280.66 427.6933333 0.014904423 0.169243925 0.111060885 7 -5 1 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3R 21110770 21110776 + 3R_21110770_21110776_+ 0.808817639 0.808796206 0.808806922 1.51E-05 rtet FBtr0084009|FBtr0084009 21110706|21110706 21110834|21110834 3R + 21110728 21110804 3'utr rtet FlyBase G44381.1 TTAAACTCACTAGAGATCAACGGAAGTATTAGCTGCACATTATACTTAATTTATCGTTTTTTACAAGTATTTTATAT 21 21110767 0.990413708 7 19 195 0.923076923 1.079181246 0.153846154 0.19047619 0.346153846 21 1 1 24 3R:21110728-21110804 7 rtet FBtr0084009|FBtr0084009 21110706|21110706 21110834|21110834 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3R + 21110729 21110802 3'utr rtet FlyBase G33536.1 TAAACTCACTAGAGATCAACGGAAGTATTAGCTGCACATTATACTTAATTTATCGTTTTTTACAAGTATTTTAT 23 21110767 0.981726444 10 22 193 0.944444444 1.531478917 0.083333333 0.391304348 0.611111111 23 2 0 34 3R:21110729-21110802 7 13.5 3406 FBgn0028468 207.3333333 14.48 21.91 0.06511254 0.932320442 0.616157006 3 3 3 0.1 dme-miR-999-3p 7mer-m8 AGTTAAC 3R 21115688 21115694 + 3R_21115688_21115694_+ 0.674514267 0.674514155 0.674514211 7.07E-08 Rab11 FBtr0084011|FBtr0084010 21115383|21115383 21116146|21116146 3R + 21115658 21115717 3'utr Rab11 FlyBase G44387.1 AAAGAATCGAAAGCAACAACATCCGGCTGTAGTTAACTGCGGTTTAAACTGAAGTTTTAT 34 21115679 0.822651977 7 28 158 0.837209302 1.556302501 0.11627907 0.264705882 0.418604651 34 7 0 36 3R:21115658-21115717 7 Rab11 FBtr0084010|FBtr0084011 21115383|21115383 21116146|21116146 AGTTAAC 7mer-m8 dme-miR-999-3p 3R + 21115662 21115701 3'utr Rab11 FlyBase G33545.1 AATCGAAAGCAACAACATCCGGCTGTAGTTAACTGCGGTT 15 21115679 0.966826174 6 13 63 0.923076923 1.380211242 0.307692308 0.466666667 0.692307692 15 2 0 24 3R:21115662-21115701 7 24.5 3407 FBgn0015790 5922.233333 446.8466667 689.1166667 0.004136953 0.054828651 0.035552761 9 9 9 0.1 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 21115801 21115806 + 3R_21115801_21115806_+ 0.999999999 1 1 0 Rab11 FBtr0084011|FBtr0084010 21115383|21115383 21116146|21116146 3R + 21115769 21115813 3'utr Rab11 FlyBase G44388.1 CAAGCAAAACTAAACACTCCAAATTCAGTTTAAGCTGTAGAACTA 8 21115793 0.884779434 6 8 46 1 1 0.2 0.25 0.4 8 0 0 10 3R:21115769-21115813 6 Rab11 FBtr0084010|FBtr0084011 21115383|21115383 21116146|21116146 AGCTGT 6mer3-8 dme-miR-1008-3p 3R + 21115723 21115814 3'utr Rab11 FlyBase G33546.1 TACAGATCCATGAGTATCGCATAAATCGACCGCCGCGGAAAGAAAGCAAGCAAAACTAAACACTCCAAATTCAGTTTAAGCTGTAGAACTAT 8 21115791 0.987906754 5 6 49 0.777777778 0.84509804 0 0.125 0.222222222 8 2 0 7 3R:21115723-21115814 6 5 3408 FBgn0015790 5922.233333 446.8466667 689.1166667 0.000844276 0.011189521 0.007255665 8 10 9 0.1 dme-miR-184-5p 6mer3-8 TGATAA 3R 21116033 21116038 + 3R_21116033_21116038_+ 1 1 1 0 Rab11 FBtr0084011|FBtr0084010 21115383|21115383 21116146|21116146 3R + 21115987 21116043 3'utr Rab11 FlyBase G44390.1 GGTTTCTCGCAACATTTTAAACGATTGGCCACTTGGTAAAACTAGCTGATAAAGAGA 5 21116033 0.955132334 4 5 27 1 0.698970004 0.4 0 0 5 0 0 5 3R:21115987-21116043 6 Rab11 FBtr0084010|FBtr0084011 21115383|21115383 21116146|21116146 TGATAA 6mer3-8 dme-miR-184-5p 3R + 21116005 21116049 3'utr Rab11 FlyBase G33547.1 AAACGATTGGCCACTTGGTAAAACTAGCTGATAAAGAGAAATCAA 6 21116029 0.948312603 5 6 26 1 0.954242509 0.444444444 0.333333333 0.555555556 6 0 0 9 3R:21116005-21116049 6 4.5 3409 FBgn0015790 5922.233333 446.8466667 689.1166667 0.000759848 0.010070569 0.006530099 0 4 2 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3R 21116121 21116127 + 3R_21116121_21116127_+ 0.519870004 0.521223846 0.520546925 0.000957281 Rab11 FBtr0084011|FBtr0084010 21115383|21115383 21116146|21116146 3R + 21116088 21116146 3'utr Rab11 FlyBase G44391.1 CGAAATAACATCATTTGTGTTTGCTATGTTAAGTGTGATTAAATAAATATAATTTAAAT 13 21116128 0.904332942 8 11 119 0.8 1.079181246 0 0.153846154 0.266666667 13 3 0 12 3R:21116088-21116146 7 Rab11 FBtr0084010|FBtr0084011 21115383|21115383 21116146|21116146 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 21116092 21116131 3'utr Rab11 FlyBase G33548.1 ATAACATCATTTGTGTTTGCTATGTTAAGTGTGATTAAAT 6 21116129 0.989468937 5 5 48 0.818181818 0.954242509 0.181818182 0.666666667 0.818181818 6 2 0 9 3R:21116092-21116131 7 9 3410 FBgn0015790 5922.233333 446.8466667 689.1166667 0.001519697 0.020141137 0.013060198 -7 -8 -7.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 21119472 21119477 - 3R_21119472_21119477_- 0.999291706 0.999868726 0.999580216 0.000408001 slmb FBtr0330049|FBtr0084032 21119250|21119250 21120458|21120719 3R - 21119448 21119495 3'utr slmb FlyBase G53019.1 AAGTTCCAATGCTATACTTGATCTGGATCACGATCACGCCGCTTCCGC 59 21119478 0.728193433 5 55 444 0.93442623 1.153814864 0.163934426 0.033898305 0.06557377 59 1 3 57 3R:21119448-21119495 6 slmb FBtr0330049|FBtr0084032 21119250|21119250 21120458|21120719 TGATCT 6mer3-8 dme-bantam-3p 3R - 21119455 21119492 3'utr slmb FlyBase G40023.1 TTCCAATGCTATACTTGATCTGGATCACGATCACGCCG 21 21119478 0.740252078 2 17 160 0.878787879 0.860338007 0.333333333 0.428571429 0.636363636 21 1 3 29 3R:21119455-21119492 6 40 3411 FBgn0023423 1620.336667 64.75333333 99.38333333 0.024686228 0.617728817 0.402481972 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 21119535 21119540 - 3R_21119535_21119540_- 0.999999966 0.999504508 0.999752237 0.000350371 slmb FBtr0330049|FBtr0330049|FBtr0330049|FBtr0084032|FBtr0084032|FBtr0084032 21119250|21119250|21119250|21119250|21119250|21119250 21120458|21120458|21120458|21120719|21120719|21120719 3R - 21119527 21119559 3'utr slmb FlyBase G53020.1 ATGTATGCCGTTCGTTGATTGTGATCAATGGAT 8 21119542 0.716516843 5 8 66 1 0.954242509 0.333333333 0.125 0.222222222 8 0 0 9 3R:21119527-21119559 6 slmb FBtr0330049|FBtr0330049|FBtr0330049|FBtr0084032|FBtr0084032|FBtr0084032 21119250|21119250|21119250|21119250|21119250|21119250 21120458|21120458|21120458|21120719|21120719|21120719 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 21119496 21119551 3'utr slmb FlyBase G40024.1 CGTTCGTTGATTGTGATCAATGGATATTTTACTATGTGTATTGCTATTTGTAAGTT 6 21119540 0.990275944 5 6 67 1 0.954242509 0.111111111 0.5 0.666666667 6 0 0 9 3R:21119496-21119551 6 5.5 3412 FBgn0023423 1620.336667 64.75333333 99.38333333 0.003394356 0.084937712 0.055341271 2 0 1 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 21119642 21119647 - 3R_21119642_21119647_- 0.999998122 0.999999079 0.9999986 7.07E-07 slmb FBtr0330049|FBtr0084032 21119250|21119250 21120458|21120719 3R - 21119579 21119692 3'utr slmb FlyBase G53021.1 AATGGATCCATTGTACTGCAATATATAACCGATTCTTTGATTGATTGATCTATGCTAACTATAGGTTTTAGATATACCGATGTATGTAGAAAATAGCAAATTCCCAGGCAATTT 65 21119648 0.989110557 16 63 594 0.973333333 1.86332286 0.386666667 0.123076923 0.24 65 2 0 73 3R:21119579-21119692 6 slmb FBtr0330049|FBtr0084032 21119250|21119250 21120458|21120719 TGATCT 6mer3-8 dme-bantam-3p 3R - 21119597 21119692 3'utr slmb FlyBase G40025.1 AATGGATCCATTGTACTGCAATATATAACCGATTCTTTGATTGATTGATCTATGCTAACTATAGGTTTTAGATATACCGATGTATGTAGAAAATAG 41 21119648 0.748865972 10 40 367 0.984126984 1.792391689 0.142857143 0.365853659 0.587301587 41 1 0 62 3R:21119597-21119692 6 34 3413 FBgn0023423 1620.336667 64.75333333 99.38333333 0.020983294 0.525069494 0.342109676 1 1 1 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 21120011 21120017 - 3R_21120011_21120017_- 0.65899847 0.658999198 0.658998834 4.95E-07 slmb FBtr0330049|FBtr0084032 21119250|21119250 21120458|21120719 3R - 21119878 21120033 3'utr slmb FlyBase G53022.1 ACAAGTATCGCGTTTAGGCAGCTGCCGCCTCAAGAATCGCAGCAGGAATCTTCAGCGCGGCCAGAAGAATCAGTCTTTAGCATAAATGTTAGTTAGAGTTGCATCATTGAAATTGGCAGAGCGCGTTGCCGTTTTGCACATTTGTAACCTATTTTA 58 21120019 0.980102631 14 54 315 0.970149254 1.812913357 0.164179104 0.157894737 0.28358209 57 2 0 65 3R:21119878-21120033 7 slmb FBtr0330049|FBtr0084032 21119250|21119250 21120458|21120719 GGCAGCT 7mer-m8 dme-miR-980-3p 3R - 21119999 21120044 3'utr slmb FlyBase G40029.1 AGCTCAAATACACAAGTATCGCGTTTAGGCAGCTGCCGCCTCAAGA 28 21120020 0.686424971 6 27 152 0.961538462 1.698970004 0.269230769 0.535714286 0.75 28 2 0 50 3R:21119999-21120044 7 31 3414 FBgn0023423 1620.336667 64.75333333 99.38333333 0.019131827 0.478739833 0.311923528 2 3 2.5 0.1 dme-bantam-3p 6mer2-7 GATCTC 3R 21120367 21120372 - 3R_21120367_21120372_- 0.736506834 0.858272818 0.797389826 0.086101564 slmb FBtr0330049|FBtr0333931|FBtr0084032 21119250|21120193|21119250 21120458|21120719|21120719 3R - 21120346 21120473 stop_codon slmb FlyBase G53024.1 GATTATGATGAATAATGAGTGAATGGTCGTTAACCAGCAGCATATACATACACACAGCAGACTTGTTTAAACAAAAAACGATGTTGAACCCAAGATACAGCGATCTCTAAGCGTCTATTTTACACACT 343 21120366 0.783030195 15 337 1539 0.985507246 2.133538908 0.157004831 0.160349854 0.304347826 343 4 2 408 3R:21120346-21120473 6 slmb FBtr0330049|FBtr0333931|FBtr0084032 21119250|21120193|21119250 21120458|21120719|21120719 GATCTC 6mer2-7 dme-bantam-3p 3R - 21120337 21120394 3'utr slmb FlyBase G40032.1 GATGTTGAACCCAAGATACAGCGATCTCTAAGCGTCTATTTTACACACTACATCCACA 205 21120366 0.954246157 3 202 900 0.987179487 2.488550717 0.128205128 0.380487805 0.592948718 205 4 0 308 3R:21120337-21120394 6 260 3415 FBgn0023423 1620.336667 64.75333333 99.38333333 0.16046048 4.015237311 2.616132819 -6 -6 -6 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 21140199 21140204 + 3R_21140199_21140204_+ 0.999922218 0.999947016 0.999934617 1.75E-05 meigo FBtr0084017|FBtr0113259 21140038|21140038 21140365|21140365 3R + 21140089 21140229 3'utr meigo FlyBase G44422.2 AGAAGACAATGCTTCCGGCTCGAGCGGCTGCAGCGCCAAAGTTTCCCCATTTCCTAGAACTGCTTATCGTACAAAGGATTCTAGCTATAGCGAACACAGCATTCGATACTTGATCTGCAACCCATAGACCGTCGTTTAAGT 380 21140199 0.976958796 20 357 2321 0.940919037 1.633468456 0.111597374 0.168421053 0.308533917 380 18 9 430 3R:21140089-21140229 6 meigo FBtr0113259|FBtr0084017 21140038|21140038 21140365|21140365 TGATCT 6mer3-8 dme-bantam-3p 3R + 21140089 21140228 3'utr meigo FlyBase G33560.1 AGAAGACAATGCTTCCGGCTCGAGCGGCTGCAGCGCCAAAGTTTCCCCATTTCCTAGAACTGCTTATCGTACAAAGGATTCTAGCTATAGCGAACACAGCATTCGATACTTGATCTGCAACCCATAGACCGTCGTTTAAG 234 21140199 0.80781479 25 217 1375 0.93982808 1.737722593 0.111747851 0.363247863 0.573065903 234 16 5 328 3R:21140089-21140228 6 267 3416 FBgn0250820 369.6666667 29.78 45.5 0.722272317 8.965748825 5.868131868 0 0 0 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 21140271 21140276 + 3R_21140271_21140276_+ 0.999986639 0.999986103 0.999986371 3.54E-07 meigo FBtr0084017|FBtr0113259 21140038|21140038 21140365|21140365 3R + 21140249 21140323 3'utr meigo FlyBase G44423.1 TATTAGAAAAGGAACAAATATTGTGCAAAAGTTTACACCAGACCTGCGGGTCTCTAACATACAGGATCATTCAAT 63 21140269 0.888460313 5 61 294 0.971428571 1.531478917 0.185714286 0.111111111 0.2 63 1 1 68 3R:21140249-21140323 6 meigo FBtr0113259|FBtr0084017 21140038|21140038 21140365|21140365 GTGCAA 6mer3-8 dme-miR-92b-3p 3R + 21140250 21140289 3'utr meigo FlyBase G33561.1 ATTAGAAAAGGAACAAATATTGTGCAAAAGTTTACACCAG 52 21140269 0.665891228 2 49 237 0.972222222 1.544068044 0.208333333 0.307692308 0.5 52 1 1 70 3R:21140250-21140289 6 53.5 3417 FBgn0250820 369.6666667 29.78 45.5 0.144724977 1.796507723 1.175824176 2 2 2 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 21159358 21159363 - 3R_21159358_21159363_- 0.730949153 0.730949444 0.730949299 1.41E-07 CG10824 FBtr0084028|FBtr0084028|FBtr0084028 21159236|21159236|21159236 21159389|21159389|21159389 3R - 21159320 21159375 3'utr CG10824 FlyBase G53041.1 GCCCATTTTTTATGTGATCACTACATTTTCAAAGCTTTACAATTATATGTATACAT 32 21159366 0.978663783 9 23 301 0.785714286 0.740362689 0.119047619 0.1875 0.380952381 32 4 5 33 3R:21159320-21159375 6 CG10824 FBtr0084028|FBtr0084028|FBtr0084028 21159236|21159236|21159236 21159389|21159389|21159389 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 21159332 21159375 3'utr CG10824 FlyBase G40046.1 GCCCATTTTTTATGTGATCACTACATTTTCAAAGCTTTACAATT 31 21159366 0.587900496 11 26 280 0.818181818 0.711204461 0.090909091 0.322580645 0.522727273 31 2 6 36 3R:21159332-21159375 6 28.5 3418 FBgn0038865 99.77666667 6.58 10.09 0.285637925 4.331306991 2.824578791 3 3 3 0.1 dme-miR-283-5p 6mer2-7 GATATT 3R 21213975 21213980 + 3R_21213975_21213980_+ 0.999999329 0.999999903 0.999999616 4.24E-07 SNF4Agamma FBtr0301586|FBtr0301588 21212526|21212526 21214269|21214269 3R + 21213947 21214006 3'utr SNF4Agamma FlyBase G44457.1 ATTACTAGATTAAACAATGAGAAATTTGGATATTGAATTAATAATGGTAAAAGGCTTAAC 24 21213973 0.955261367 7 24 187 1 1.477121255 0 0.25 0.4 24 0 0 30 3R:21213947-21214006 6 SNF4Agamma FBtr0301588|FBtr0301586 21212526|21212526 21214269|21214269 GATATT 6mer2-7 dme-miR-283-5p 3R + 21213952 21213987 3'utr SNF4Agamma FlyBase G33590.1 TAGATTAAACAATGAGAAATTTGGATATTGAATTAA 21 21213973 0.862708028 5 21 164 1 1.462397998 0.034482759 0.285714286 0.482758621 21 0 0 29 3R:21213952-21213987 6 21.5 3419 FBgn0264357 1601.583333 44.32333333 67.41333333 0.013424216 0.485071821 0.318928006 2 2 2 0.1 dme-miR-988-3p 8mer-A1 ACAAGGGA 3R 21266220 21266227 - 3R_21266220_21266227_- 0.611095471 0.61220762 0.611651545 0.000786373 Rab1 FBtr0084104 21266027 21266947 3R - 21266193 21266279 3'utr Rab1 FlyBase G53063.1 AACATTTTTAGATTTAACGTCGAGCGATTGTGTGTTTGAATTATCGTGTGACACAAGGGATTTGTTTAGGCACATAATTAGTGTAAT 20 21266216 0.797704839 13 18 165 0.913043478 1.322219295 0.347826087 0.1 0.217391304 20 2 0 21 3R:21266193-21266279 8 Rab1 FBtr0084104 21266027 21266947 ACAAGGGA 8mer-A1 dme-miR-988-3p 3R - 21266208 21266273 3'utr Rab1 FlyBase G40066.1 TTTAGATTTAACGTCGAGCGATTGTGTGTTTGAATTATCGTGTGACACAAGGGATTTGTTTAGGCA 9 21266216 0.971630058 7 9 61 1 1.041392685 0.545454545 0.222222222 0.363636364 9 0 0 11 3R:21266208-21266273 8 8 3420 FBgn0016700 3065.546667 206.5566667 315.7 0.002609649 0.038730292 0.025340513 -11 -11 -11 0.1 dme-miR-1002-5p 7mer-m8 CTACTTA 3R 21266397 21266403 - 3R_21266397_21266403_- 0.540127982 0.584167442 0.562147712 0.031140558 Rab1 FBtr0084104 21266027 21266947 3R - 21266385 21266466 3'utr Rab1 FlyBase G53065.1 TAACTACACATTAATTGAGCGCAGGCGACGGCAGGAGCAATTGTACTTGTCCTGTGTCAGCTACTACTTACCACTATGTATA 21 21266399 0.965452715 7 21 127 1 1.361727836 0.347826087 0.095238095 0.173913043 21 0 0 23 3R:21266385-21266466 7 Rab1 FBtr0084104 21266027 21266947 CTACTTA 7mer-m8 dme-miR-1002-5p 3R - 21266372 21266454 3'utr Rab1 FlyBase G40068.1 AATTGAGCGCAGGCGACGGCAGGAGCAATTGTACTTGTCCTGTGTCAGCTACTACTTACCACTATGTATACATATGTATGTGT 11 21266399 0.963019567 7 10 58 0.928571429 0.812913357 0.428571429 0.181818182 0.357142857 11 0 1 13 3R:21266372-21266454 7 8 3421 FBgn0016700 3065.546667 206.5566667 315.7 0.002609649 0.038730292 0.025340513 -4 -4 -4 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 21271338 21271343 - 3R_21271338_21271343_- 0.730938561 0.730949445 0.730944003 7.64E-06 CG3308 FBtr0084102|FBtr0084102|FBtr0084102 21271076|21271076|21271076 21271954|21271954|21271954 3R - 21271323 21271391 3'utr CG3308 FlyBase G53081.1 TTCTTGTTGCGACGATGACGATGATGATGATGATTATGGGAAACGTAATGTGATCATTTTAAAAGCTAA 36 21271345 0.704356967 14 34 253 0.953488372 1.311753861 0.558139535 0.138888889 0.279069767 36 1 1 41 3R:21271323-21271391 6 CG3308 FBtr0084102|FBtr0084102|FBtr0084102 21271076|21271076|21271076 21271954|21271954|21271954 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 21271317 21271443 3'utr CG3308 FlyBase G40081.1 ACTTTTAGTTTGTGTCTCTGTTAGCCTGTAGTCGTACTTTTGTACATATTTATTCTTGTTGCGACGATGACGATGATGATGATGATTATGGGAAACGTAATGTGATCATTTTAAAAGCTAATTAGTT 37 21271335 0.988787621 16 34 342 0.903225806 1.748188027 0.483870968 0.486486486 0.693548387 37 6 0 56 3R:21271317-21271443 6 22 3422 FBgn0038877 892.1133333 50.83666667 77.60666667 0.024660544 0.432758508 0.283480801 2 -8 -3 0.1 dme-miR-980-3p 6mer2-7 GCAGCT 3R 21271485 21271490 - 3R_21271485_21271490_- 1 1 1 0 CG3308 FBtr0084102 21271076 21271954 3R - 21271474 21271523 3'utr CG3308 FlyBase G53083.1 CTCCCGAAGCGATATATGTTAATGTTAAGTGCTGCAGCTTGTCTTTTGTT 16 21271482 0.967894432 10 15 143 0.95 0.977723605 0.05 0.25 0.4 16 0 1 19 3R:21271474-21271523 6 CG3308 FBtr0084102 21271076 21271954 GCAGCT 6mer2-7 dme-miR-980-3p 3R - 21271462 21271508 3'utr CG3308 FlyBase G40082.1 ATGTTAATGTTAAGTGCTGCAGCTTGTCTTTTGTTTGTTTCTTCTGT 23 21271482 0.90662099 8 23 237 1 1.531478917 0.294117647 0.260869565 0.5 23 0 0 34 3R:21271462-21271508 6 17.5 3423 FBgn0038877 892.1133333 50.83666667 77.60666667 0.019616342 0.344239722 0.225496091 -8 -8 -8 0.1 dme-miR-932-5p 6mer3-8 GGAATT 3R 21271650 21271655 - 3R_21271650_21271655_- 0.591719598 0.591610323 0.59166496 7.73E-05 CG3308 FBtr0084102 21271076 21271954 3R - 21271571 21271680 3'utr CG3308 FlyBase G53084.1 TTGCAGGGTCTAGCTTTAAGTTGTTGGAATTTCCGAGCAATTGCTTTATTTACTCGAGTACCCAGAGAAACGGTGCCAAGGTGGTGCCTCGTGAACGTCGACTCCGGATT 16 21271640 0.986028902 11 15 123 0.947368421 1.255272505 0.052631579 0.0625 0.210526316 16 1 0 18 3R:21271571-21271680 6 CG3308 FBtr0084102 21271076 21271954 GGAATT 6mer3-8 dme-miR-932-5p 3R - 21271630 21271689 3'utr CG3308 FlyBase G40083.1 GATCGAAGTTTGCAGGGTCTAGCTTTAAGTTGTTGGAATTTCCGAGCAATTGCTTTATTT 9 21271650 0.759354835 5 8 79 0.833333333 1 0.333333333 0.333333333 0.5 9 2 0 10 3R:21271630-21271689 6 6 3424 FBgn0038877 892.1133333 50.83666667 77.60666667 0.006725603 0.118025048 0.077312946 -15 -5 -10 0.1 dme-miR-305-3p 7mer-m8 ATGTGCC 3R 21271836 21271842 - 3R_21271836_21271842_- 0.674515655 0.674515652 0.674515653 0 CG3308 FBtr0084102 21271076 21271954 3R - 21271770 21272096 lincRNA_intron-lincRNA_exon CG3308 FlyBase G53085.1 CAGATATTGTACCTTCCAACGCAACGAGCCGTGCAGTTTGCCCGCCATTGTAGAGATGATAGCCGCCTTCATGAAGAAAAGCCCGGACGAGGTGGCTTTGGCCACTGCCTTTAATGCCCTGAAACTGTTTGGCTTGTCCTAGAAAATGGTAAAGGAGCCACATGGAACTGAACGACAAAGTGTGCCACCCAGCAGCTTTAAACCCGTAACTCTATAGATTCAACGAGCCTGAGATTCACGATAGACTCATACCTATGTGCCTTAACCACTAATCGAATTCAGGATGAAGCGCTTATCCTGATCCCCACACATACACACATCCACAAA 194 21271841 0.984368764 32 189 994 0.974137931 2.053078443 0.254310345 0.164948454 0.301724138 194 5 1 226 3R:21271770-21272096 7 CG3308 FBtr0084102 21271076 21271954 ATGTGCC 7mer-m8 dme-miR-305-3p 3R - 21271789 21271946 3'utr CG3308 FlyBase G40084.1 AAAGGAGCCACATGGAACTGAACGACAAAGTGTGCCACCCAGCAGCTTTAAACCCGTAACTCTATAGATTCAACGAGCCTGAGATTCACGATAGACTCATACCTATGTGCCTTAACCACTAATCGAATTCAGGATGAAGCGCTTATCCTGATCCCCAC 121 21271841 0.981685715 13 116 574 0.938888889 1.625826713 0.261111111 0.363636364 0.572222222 121 8 3 169 3R:21271789-21271946 7 65.5 3425 FBgn0038877 892.1133333 50.83666667 77.60666667 0.073421165 1.288440102 0.843999656 -1 -1 -1 0.1 dme-miR-14-3p 6mer3-8 AAGACT 3R 21320908 21320913 - 3R_21320908_21320913_- 0.999962241 0.999945834 0.999954037 1.16E-05 CG16791 FBtr0343807|FBtr0343805|FBtr0084095|FBtr0343806 21318298|21320758|21318298|21320758 21321053|21321053|21321053|21321053 3R - 21320877 21320990 3'utr CG16791 FlyBase G53092.1 AAAGCGCTACGTATACATCACTAATTCCCCGAAACCAAATCCCATTATGATCATCGACATGTATACAAGACACATCTAAGACTTATTGTATATTTCGTGTAGTATGTGTAAGGC 162 21320905 0.976922097 11 154 1008 0.964102564 1.797036595 0.071794872 0.166666667 0.307692308 162 5 2 188 3R:21320877-21320990 6 CG16791 FBtr0343806|FBtr0084095|FBtr0343805|FBtr0343807 21320758|21318298|21320758|21318298 21321053|21321053|21321053|21321053 AAGACT 6mer3-8 dme-miR-14-3p 3R - 21320881 21320962 3'utr CG16791 FlyBase G40094.1 CCGAAACCAAATCCCATTATGATCATCGACATGTATACAAGACACATCTAAGACTTATTGTATATTTCGTGTAGTATGTGTA 121 21320905 0.752327661 8 111 726 0.924324324 1.931966115 0.081081081 0.380165289 0.594594595 121 13 1 171 3R:21320881-21320962 6 107.5 3426 FBgn0038881 628.8366667 15.01 23.02333333 0.170950591 7.161892072 4.669176198 -8 -8 -8 0.1 dme-miR-317-3p 6mer2-7 GTGTTC 3R 21361863 21361868 + 3R_21361863_21361868_+ 0.99999993 0.999999856 0.999999893 0 pre-mod(mdg4)-Z FBtr0303402 21361829 21362131 3R + 21361839 21361882 3'utr pre-mod(mdg4)-Z FlyBase G44529.1 TATACATTCCCAACCCAAACGTTCGTGTTCTGTTAGGGCTAAGC 8 21361869 0.983086829 3 8 63 1 0.954242509 0 0.125 0.222222222 8 0 0 9 3R:21361839-21361882 6 pre-mod(mdg4)-Z FBtr0303402 21361829 21362131 GTGTTC 6mer2-7 dme-miR-317-3p 3R + 21361843 21361883 3'utr pre-mod(mdg4)-Z FlyBase G33639.1 CATTCCCAACCCAAACGTTCGTGTTCTGTTAGGGCTAAGCT 8 21361869 0.654697288 2 8 70 1 1.041392685 0.181818182 0.25 0.454545455 8 0 0 11 3R:21361843-21361883 6 8 3427 FBgn0261838 149.3333333 9.943333333 15.14333333 0.053571429 0.804559169 0.528285274 -6 -6 -6 0.1 dme-miR-14-3p 7mer-A1 AGACTGA 3R 21361925 21361931 + 3R_21361925_21361931_+ 0.823349417 0.823349523 0.82334947 7.07E-08 pre-mod(mdg4)-Z FBtr0303402 21361829 21362131 3R + 21361905 21361993 3'utr pre-mod(mdg4)-Z FlyBase G44530.1 TGAGCGTATATCATTGATTTAGACTGAGTGTCCCGAGCCTAGTTAGGATGGGTAAGTAGCCTGTTCATCTGGGATCTCAAAGTACCATT 96 21361923 0.888712736 17 88 710 0.923076923 1.73239376 0.247863248 0.166666667 0.316239316 96 8 1 108 3R:21361905-21361993 7 pre-mod(mdg4)-Z FBtr0303402 21361829 21362131 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 21361902 21361987 3'utr pre-mod(mdg4)-Z FlyBase G33640.1 TCTTGAGCGTATATCATTGATTTAGACTGAGTGTCCCGAGCCTAGTTAGGATGGGTAAGTAGCCTGTTCATCTGGGATCTCAAAGT 65 21361923 0.791859326 10 62 475 0.927083333 1.347330015 0.364583333 0.323076923 0.541666667 65 4 3 89 3R:21361902-21361987 7 65.5 3428 FBgn0261838 149.3333333 9.943333333 15.14333333 0.438616071 6.587328193 4.325335681 2 2 2 0.1 dme-miR-965-3p 6mer2-7 ACGCTT 3R 21362048 21362053 + 3R_21362048_21362053_+ 0.999998476 0.995990765 0.99799462 0.002833872 pre-mod(mdg4)-Z FBtr0303402 21361829 21362131 3R + 21361994 21362127 3'utr pre-mod(mdg4)-Z FlyBase G44531.1 TTTGTAATTCTTAAAGTCCCGGGTCATATTATTTATTCTGTTCTCATTGCTTAGACGCTTTTGGCCACGGCACTGACTTAAACAATGGCTTGTGTTACGTACAAAATATGAACTCTTAATAAAATCAGATGAAC 47 21362054 0.98641442 12 44 376 0.944444444 1.707570176 0.148148148 0.14893617 0.259259259 47 3 0 51 3R:21361994-21362127 6 pre-mod(mdg4)-Z FBtr0303402 21361829 21362131 ACGCTT 6mer2-7 dme-miR-965-3p 3R + 21361999 21362100 3'utr pre-mod(mdg4)-Z FlyBase G33641.1 AATTCTTAAAGTCCCGGGTCATATTATTTATTCTGTTCTCATTGCTTAGACGCTTTTGGCCACGGCACTGACTTAAACAATGGCTTGTGTTACGTACAAAAT 29 21362054 0.904392592 11 26 212 0.918918919 1.531478917 0.135135135 0.24137931 0.405405405 29 3 0 34 3R:21361999-21362100 6 20.5 3429 FBgn0261838 149.3333333 9.943333333 15.14333333 0.137276786 2.06168287 1.353731015 -6 -6 -6 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 21363205 21363210 - 3R_21363205_21363210_- 0.998057695 0.999592539 0.998825117 0.001085267 pre-mod(mdg4)-E FBtr0343748|FBtr0343749 21362966|21362966 21363279|21363279 3R - 21363179 21363232 3'utr pre-mod(mdg4)-E FlyBase G53111.1 TGAACTAATGTCGATGTAGAGTGTACCTAAGGTGAGCGATTTTTAGCGGGCAGC 46 21363211 0.830108965 2 45 293 0.980769231 1.707570176 0.288461538 0.130434783 0.230769231 46 1 0 51 3R:21363179-21363232 6 pre-mod(mdg4)-E FBtr0343749|FBtr0343748 21362966|21362966 21363279|21363279 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 21363191 21363235 3'utr pre-mod(mdg4)-E FlyBase G40110.1 TGTTGAACTAATGTCGATGTAGAGTGTACCTAAGGTGAGCGATTT 40 21363211 0.8181754 4 37 225 0.876923077 1.755874856 0.276923077 0.425 0.646153846 40 8 0 57 3R:21363191-21363235 6 41.5 3430 FBgn0266172 87.15333333 4.996666667 7.713333333 0.476172263 8.305537025 5.380293863 1 1 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 21363255 21363260 - 3R_21363255_21363260_- 0.99974218 0.996079499 0.997910839 0.00258992 pre-mod(mdg4)-E FBtr0343748|FBtr0343749 21362966|21362966 21363279|21363279 3R - 21363243 21363268 3'utr pre-mod(mdg4)-E FlyBase G53112.1 GTGGGCTCACCAAAATCTGTGGTTTT 7 21363253 0.827501698 3 7 53 1 0.954242509 0.777777778 0.142857143 0.333333333 7 0 0 9 3R:21363243-21363268 6 pre-mod(mdg4)-E FBtr0343749|FBtr0343748 21362966|21362966 21363279|21363279 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 21363243 21363273 3'utr pre-mod(mdg4)-E FlyBase G40111.1 CGGTTGTGGGCTCACCAAAATCTGTGGTTTT 10 21363253 0.869280638 3 9 83 0.923076923 0.77815125 0.461538462 0.3 0.461538462 10 0 1 12 3R:21363243-21363273 6 8.5 3431 FBgn0266172 87.15333333 4.996666667 7.713333333 0.097529259 1.701134089 1.1019879 -7 -7 -7 0.1 dme-miR-92b-3p 7mer-m8 GTGCAAT 3R 21371605 21371611 - 3R_21371605_21371611_- 0.655703599 0.659000043 0.657351821 0.002330907 pre-mod(mdg4)-O FBtr0347107 21370916 21371636 3R - 21371539 21371635 5'utr pre-mod(mdg4)-O FlyBase G53120.1 TTGGCTATCCAACTGGTCTTGGCAGTGCAATGTAGTTACTAAGTAACAGCTATTAAAAGTACATATCTAGGAAATGGACTATGTACACTTATTTTCG 19 21371616 0.97227807 9 19 139 1 1.431363764 0.185185185 0.210526316 0.444444444 19 0 0 27 3R:21371539-21371635 7 pre-mod(mdg4)-O FBtr0347107 21370916 21371636 GTGCAAT 7mer-m8 dme-miR-92b-3p 3R - 21371586 21371630 5'utr pre-mod(mdg4)-O FlyBase G40118.1 TATCCAACTGGTCTTGGCAGTGCAATGTAGTTACTAAGTAACAGC 8 21371616 0.733652102 4 8 50 1 1.041392685 0.181818182 0.25 0.454545455 8 0 0 11 3R:21371586-21371630 7 9 3432 FBgn0267651 33.88666667 1.706666667 2.616666667 0.265591186 5.2734375 3.439490446 5 5 5 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 3R 21527137 21527143 + 3R_21527137_21527143_+ 0.782859518 0.782911361 0.782885439 3.67E-05 CG7956 FBtr0334664 21526920 21527691 3R + 21527097 21527147 3'utr CG7956 FlyBase G44556.1 TTATCTTTACAATAAATACCTAAGACTAGCATGTATTATTGTACAAAAAAA 8 21527135 0.974888575 3 8 56 1 0.954242509 0 0.125 0.222222222 8 0 0 9 3R:21527097-21527147 7 CG7956 FBtr0334664 21526920 21527691 GTACAAA 7mer-A1 dme-miR-305-5p 3R + 21527109 21527147 3'utr CG7956 FlyBase G33659.1 TAAATACCTAAGACTAGCATGTATTATTGTACAAAAAAA 5 21527133 0.98405328 5 5 33 1 0.698970004 0 0 0 5 0 0 5 3R:21527109-21527147 7 4.5 3433 FBgn0038890 1061.573333 33.39 51.31 0.004238991 0.134770889 0.087702202 2 4 3 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3R 21527808 21527814 + 3R_21527808_21527814_+ 0.521223855 0.521223855 0.521223855 0 CG7956 FBtr0301211 21527595 21528598 3R + 21527782 21527836 3'utr CG7956 FlyBase G44558.1 ATAATGTAGTTGATATACGCCATATTTGTGATTGTTATAGCACCAAGCTGTAGTG 48 21527814 0.590203976 7 46 452 0.981818182 1.431363764 0.072727273 0.125 0.236363636 48 0 1 54 3R:21527782-21527836 7 CG7956 FBtr0301211 21527595 21528598 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 21527793 21527858 3'utr CG7956 FlyBase G33660.1 GATATACGCCATATTTGTGATTGTTATAGCACCAAGCTGTAGTGAGTTTATAGATTTTTGGGCAAC 25 21527814 0.988218921 6 24 217 0.977777778 1.643452676 0.044444444 0.56 0.755555556 25 1 0 44 3R:21527793-21527858 7 34 3434 FBgn0038890 1061.573333 33.39 51.31 0.032027933 1.018268943 0.662638862 -6 -6 -6 0.1 dme-miR-999-3p 6mer3-8 AGTTAA 3R 21570269 21570274 - 3R_21570269_21570274_- 0.99936846 0.999999914 0.999684187 0.000446467 InR FBtr0084121|FBtr0290232|FBtr0290230|FBtr0290231 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 3R - 21570242 21570298 3'utr InR FlyBase G53137.1 AAGCTAATTGTAAAAGTAATGCTAAGTTAATTGTTTCCTGTTTGTTTAAGCAAAAAA 6 21570267 0.989288599 3 5 56 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3R:21570242-21570298 6 InR FBtr0290230|FBtr0290231|FBtr0084121|FBtr0290232 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 AGTTAA 6mer3-8 dme-miR-999-3p 3R - 21570248 21570284 3'utr InR FlyBase G40134.1 AGTAATGCTAAGTTAATTGTTTCCTGTTTGTTTAAGC 6 21570268 0.720581899 3 6 62 1 1.041392685 0.272727273 0.333333333 0.636363636 6 0 0 11 3R:21570248-21570284 6 5.5 3435 FBgn0013984 3333.303333 37.67666667 58.15666667 0.001650015 0.145978944 0.094572133 -7 -6 -6.5 0.1 dme-miR-276a-3p 7mer-m8 AGTTCCT 3R 21570773 21570779 - 3R_21570773_21570779_- 0.389293809 0.507760185 0.448526997 0.083768395 InR FBtr0084121|FBtr0290232|FBtr0290230|FBtr0290231 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 3R - 21570714 21570921 3'utr InR FlyBase G53139.2 ATTAATTTAACAATGTAATACGCTATATGCATAACGAAACAATAGATATTCTACACAAACACACATGCACACAGACACCCACACACCCATACACACATTTACATATATTACACACATACACACTAAAAAGACTGAAAGATATAGTTCCTTTTGTTTTTATGTACATAAAAAAATGTGAAAAGAAAAAAGAGAAATTCTAACGAAAATC 303 21570805 0.999945463 24 268 1646 0.883333333 1.461034435 0.111111111 0.138613861 0.275 303 32 10 318 3R:21570714-21570921 7 InR FBtr0290230|FBtr0290231|FBtr0084121|FBtr0290232 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 AGTTCCT 7mer-m8 dme-miR-276a-3p 3R - 21570728 21570817 3'utr InR FlyBase G40139.1 ATATTACACACATACACACTAAAAAGACTGAAAGATATAGTTCCTTTTGTTTTTATGTACATAAAAAAATGTGAAAAGAAAAAAGAGAAA 239 21570772 0.975740556 16 211 1338 0.872881356 1.410777233 0.076271186 0.372384937 0.576271186 239 34 11 309 3R:21570728-21570817 7 125 3436 FBgn0013984 3333.303333 37.67666667 58.15666667 0.037500338 3.317703265 2.149366653 26 -7 9.5 0.1 dme-miR-283-5p 7mer-m1 GATATTT 3R 21571009 21571015 - 3R_21571009_21571015_- 0.764784857 0.76553398 0.765159418 0.000529694 InR FBtr0084121|FBtr0290232|FBtr0290230|FBtr0290231 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 3R - 21570991 21571053 3'utr InR FlyBase G53140.1 ACTAGTGCTAATTATATAAACAAAACTGGGAAGCAAGCGATATTTACACTGAAAACTGAAGTA 34 21571011 0.85967824 9 31 168 0.868421053 1.217483944 0.105263158 0.088235294 0.184210526 34 4 1 33 3R:21570991-21571053 7 InR FBtr0290230|FBtr0290231|FBtr0084121|FBtr0290232 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 GATATTT 7mer-m1 dme-miR-283-5p 3R - 21570976 21571059 3'utr InR FlyBase G40141.1 AAAACAACTAGTGCTAATTATATAAACAAAACTGGGAAGCAAGCGATATTTACACTGAAAACTGAAGTAAAAACTACTAAAAAA 39 21571011 0.954712214 8 37 171 0.927272727 1.707570176 0.072727273 0.282051282 0.490909091 39 4 0 51 3R:21570976-21571059 7 32 3437 FBgn0013984 3333.303333 37.67666667 58.15666667 0.009600086 0.849332036 0.550237863 -4 -4 -4 0.1 dme-miR-2a-2-5p 6mer2-7 GATGAG 3R 21571114 21571119 - 3R_21571114_21571119_- 0.999049894 0.999933201 0.999491547 0.000624587 InR FBtr0084121|FBtr0290232|FBtr0290230|FBtr0290231 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 3R - 21571082 21571219 3'utr InR FlyBase G53141.1 TTGTTTTTATTTTATAGATGCAAAGCGAAAACAAGGAAACTAAATATTTAAATGAATTATACAAATTACTTAGATTGTAGTCAGATAGTAAGGAGAAGACGATGAGTCGAGAGATAGGTAGGAATCCTTGAACTAATT 34 21571117 0.930428465 13 28 165 0.785714286 1.041392685 0.261904762 0.176470588 0.333333333 34 7 2 33 3R:21571082-21571219 6 InR FBtr0290230|FBtr0290231|FBtr0084121|FBtr0290232 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 GATGAG 6mer2-7 dme-miR-2a-2-5p 3R - 21571085 21571238 3'utr InR FlyBase G40142.1 CACGCATGTGCTAGGTCTTTTGTTTTTATTTTATAGATGCAAAGCGAAAACAAGGAAACTAAATATTTAAATGAATTATACAAATTACTTAGATTGTAGTCAGATAGTAAGGAGAAGACGATGAGTCGAGAGATAGGTAGGAATCCTTGAACTA 25 21571117 0.974337027 18 23 147 0.933333333 1.447158031 0.233333333 0.16 0.3 25 2 0 28 3R:21571085-21571238 6 11 3438 FBgn0013984 3333.303333 37.67666667 58.15666667 0.00330003 0.291957887 0.189144265 -2 -2 -2 0.1 dme-miR-1012-3p 7mer-A1 TGACTAA 3R 21571281 21571287 - 3R_21571281_21571287_- 0.821597167 0.821302099 0.821449633 0.000208667 InR FBtr0084121|FBtr0290232|FBtr0290230|FBtr0290231 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 3R - 21571257 21571362 3'utr InR FlyBase G53142.1 ACAACAAAAGTATTCGATATTTGCCTTCGCTCTTTATATTATTATATATTTAACTATACAAACACATATATTTAATGACTAAATGAAAGCAAAGCAAAGCAAAGAA 53 21571279 0.979477025 7 51 209 0.970588235 1.51851394 0.014705882 0.20754717 0.382352941 53 1 1 66 3R:21571257-21571362 7 InR FBtr0290230|FBtr0290231|FBtr0084121|FBtr0290232 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 TGACTAA 7mer-A1 dme-miR-1012-3p 3R - 21571259 21571304 3'utr InR FlyBase G40143.1 CAAACACATATATTTAATGACTAAATGAAAGCAAAGCAAAGCAAAG 33 21571279 0.969058928 3 31 111 0.948717949 1.091080469 0.025641026 0.181818182 0.307692308 33 0 2 37 3R:21571259-21571304 7 39.5 3439 FBgn0013984 3333.303333 37.67666667 58.15666667 0.011850107 1.048394232 0.679199862 -8 -8 -8 0.1 dme-miR-283-5p 6mer3-8 TGATAT 3R 21571575 21571580 - 3R_21571575_21571580_- 1 0.994052178 0.997026089 0.00420573 InR FBtr0084121|FBtr0290232|FBtr0290230|FBtr0290231 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 3R - 21571509 21571603 3'utr InR FlyBase G53143.1 TACACATAATTAAGAACTGAACGTGATATGTTTGCTGAGTGTACTATCCTGACAGTTCTCCGATTTCTAGCAAAAGGAACGGAACCCAAAGTTCA 30 21571574 0.982380416 10 28 205 0.925 1.091080469 0.1 0.2 0.4 30 1 2 37 3R:21571509-21571603 6 InR FBtr0290230|FBtr0290231|FBtr0084121|FBtr0290232 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 TGATAT 6mer3-8 dme-miR-283-5p 3R - 21571544 21571597 3'utr InR FlyBase G40144.1 TAATTAAGAACTGAACGTGATATGTTTGCTGAGTGTACTATCCTGACAGTTCTC 27 21571575 0.985657883 6 22 181 0.820512821 0.903089987 0.282051282 0.333333333 0.538461538 27 4 3 32 3R:21571544-21571597 6 26 3440 FBgn0013984 3333.303333 37.67666667 58.15666667 0.00780007 0.690082279 0.447068264 -6 -5 -5.5 0.1 dme-miR-317-5p 6mer2-7 TATCCC 3R 21572267 21572272 - 3R_21572267_21572272_- 0.993840271 1 0.996920135 0.004355566 InR FBtr0084121|FBtr0290232|FBtr0290230|FBtr0290231 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 3R - 21572179 21572308 3'utr InR FlyBase G53147.1 ATGCATGTCGAAGAGCCTTGCAGTTTTAGCGCGTTTTATCCCCTGATTTTTAATTTATATTTACACCTACCATTATGTTAAGCAATTGGTAAGCATTGCTTGATTGTTCATACTTCACTTAAAATATCTT 73 21572271 0.800814006 21 69 667 0.942528736 1.913813852 0.149425287 0.191780822 0.32183908 73 5 0 82 3R:21572179-21572308 6 InR FBtr0290230|FBtr0290231|FBtr0084121|FBtr0290232 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 TATCCC 6mer2-7 dme-miR-317-5p 3R - 21572258 21572308 3'utr InR FlyBase G40150.1 ATGCATGTCGAAGAGCCTTGCAGTTTTAGCGCGTTTTATCCCCTGATTTTT 16 21572271 0.80689622 7 13 133 0.833333333 0.875061263 0.111111111 0.125 0.222222222 16 2 1 15 3R:21572258-21572308 6 12.5 3441 FBgn0013984 3333.303333 37.67666667 58.15666667 0.003750034 0.331770326 0.214936665 -1 -1 -1 0.1 dme-miR-7-5p 6mer3-8 GTCTTC 3R 21572393 21572398 - 3R_21572393_21572398_- 0.999999998 0.999999995 0.999999997 0 InR FBtr0084121|FBtr0290232|FBtr0290230|FBtr0290231 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 3R - 21572317 21572416 3'utr InR FlyBase G53148.1 AAAAACAAAACAGCAACTGTCTTCACTGAGTTAGCTAGCAATAGTTATAATTATCCAAACACCCGAACTACACGTAACTAGGTTTAAATGTTATTCAGCT 39 21572398 0.973760682 14 35 214 0.884615385 1.662757832 0 0.230769231 0.423076923 39 6 0 46 3R:21572317-21572416 6 InR FBtr0290230|FBtr0290231|FBtr0084121|FBtr0290232 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 GTCTTC 6mer3-8 dme-miR-7-5p 3R - 21572336 21572453 3'utr InR FlyBase G40151.1 GAAATAGATGAACTCTACAACAGCAAACAAGCAATACAAAAACAAAACAGCAACTGTCTTCACTGAGTTAGCTAGCAATAGTTATAATTATCCAAACACCCGAACTACACGTAACTAG 25 21572399 0.981590083 10 19 139 0.714285714 1.397940009 0.171428571 0.32 0.514285714 25 10 0 25 3R:21572336-21572453 6 18 3442 FBgn0013984 3333.303333 37.67666667 58.15666667 0.005400049 0.47774927 0.309508798 0 1 0.5 0.1 dme-miR-8-3p 6mer2-7 AGTATT 3R 21572798 21572803 - 3R_21572798_21572803_- 0.999651471 0.999999989 0.99982573 0.000246427 InR FBtr0084121|FBtr0290232|FBtr0290230|FBtr0290231 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 3R - 21572786 21572821 3'utr InR FlyBase G53151.1 ATGTTTACGTATTCGTTTAGTATTTACTCTACATTT 6 21572799 0.907974838 3 4 58 0.777777778 0.84509804 0.222222222 0.5 0.666666667 6 2 0 7 3R:21572786-21572821 6 InR FBtr0290230|FBtr0290231|FBtr0084121|FBtr0290232 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 AGTATT 6mer2-7 dme-miR-8-3p 3R - 21572757 21572850 3'utr InR FlyBase G40155.1 AATACCAATAGTTTCGATTAAGCCTATTTATGTTTACGTATTCGTTTAGTATTTACTCTACATTTTTTGTTTGTTTAAATTAATGCACTAGAGC 8 21572806 0.992650458 6 7 79 0.928571429 1.113943352 0 0.375 0.642857143 8 1 0 13 3R:21572757-21572850 6 4 3443 FBgn0013984 3333.303333 37.67666667 58.15666667 0.001200011 0.106166504 0.068779733 -4 3 -0.5 0.1 dme-miR-965-3p 7mer-A1 ACGCTTA 3R 21786170 21786176 - 3R_21786170_21786176_- 0.801064728 0.817639017 0.809351873 0.0117198 CASK FBtr0084162|FBtr0112873|FBtr0301327|FBtr0301328|FBtr0084161|FBtr0330368|FBtr0112872 21785760|21785760|21783398|21785760|21785760|21785760|21785760 21786682|21786682|21786682|21786682|21786682|21786589|21786682 3R - 21786109 21786210 3'utr CASK FlyBase G53257.1 TGTTTTATTCAGCATTTAGTCAAAACAGCATTAAACGCTTATGTAAATCTTGCACTTGTTAGTGTCTAAGTTAAATGGAGTTAGACAAATCGAAACTGAAGC 37 21786153 0.987016403 15 35 297 0.955555556 1.633468456 0.111111111 0.216216216 0.355555556 37 2 0 43 3R:21786109-21786210 7 CASK FBtr0301328|FBtr0084161|FBtr0330368|FBtr0112872|FBtr0084162|FBtr0112873|FBtr0301327 21785760|21785760|21785760|21785760|21785760|21785760|21783398 21786682|21786682|21786589|21786682|21786682|21786682|21786682 ACGCTTA 7mer-A1 dme-miR-965-3p 3R - 21786125 21786226 3'utr CASK FlyBase G40239.1 ATTGTTTTGTTGTATTTGTTTTATTCAGCATTTAGTCAAAACAGCATTAAACGCTTATGTAAATCTTGCACTTGTTAGTGTCTAAGTTAAATGGAGTTAGAC 24 21786179 0.984813899 14 23 189 0.96875 1.491361694 0.0625 0.291666667 0.46875 24 1 0 31 3R:21786125-21786226 7 16 3444 FBgn0013759 1781.206667 49.49333333 75.88666667 0.008982675 0.323275862 0.210840727 -23 3 -10 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 3R 21786240 21786245 - 3R_21786240_21786245_- 0.981644811 0.957731841 0.969688326 0.016909044 CASK FBtr0084162|FBtr0112873|FBtr0301327|FBtr0301328|FBtr0084161|FBtr0330368|FBtr0112872 21785760|21785760|21783398|21785760|21785760|21785760|21785760 21786682|21786682|21786682|21786682|21786682|21786589|21786682 3R - 21786224 21786278 3'utr CASK FlyBase G53258.1 TTTAATCGATTGTATTTGCCATTCCATGCTCAATGTGTTATATTTTACGATTATT 9 21786245 0.891542328 5 8 82 1 1.146128036 0.357142857 0.333333333 0.571428571 9 0 0 14 3R:21786224-21786278 6 CASK FBtr0301328|FBtr0084161|FBtr0330368|FBtr0112872|FBtr0084162|FBtr0112873|FBtr0301327 21785760|21785760|21785760|21785760|21785760|21785760|21783398 21786682|21786682|21786589|21786682|21786682|21786682|21786682 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 21786232 21786275 3'utr CASK FlyBase G40240.1 AATCGATTGTATTTGCCATTCCATGCTCAATGTGTTATATTTTA 14 21786245 0.723780237 4 13 136 0.875 1.322219295 0.125 0.571428571 0.75 14 3 0 21 3R:21786232-21786275 6 8.5 3445 FBgn0013759 1781.206667 49.49333333 75.88666667 0.004772046 0.171740302 0.112009136 0 0 0 0.1 dme-bantam-3p 8mer-A1 TGATCTCA 3R 21851167 21851174 - 3R_21851167_21851174_- 0.631134893 0.631136157 0.631135525 9.19E-07 glec FBtr0084157 21850692 21851709 3R - 21851137 21851363 3'utr glec FlyBase G53271.1 GATATCGGTCTTATAATGGAAATTATTAAGTTAATGGATATGTGCTAATGTTAGACAAGCGATCGACAGCGCCATGCATCCACTATATATAGACTAAACCCCAACCCAAACCAATTCAAGCGTTCTCAGCGTGTTTTCGGGTCCAGATGCACGCGTGTGCCAAAAGTATTTACAATTTACTTTGTGTCATGATCTCAATTATTAAAAACAATTTTATTATTTTGTTT 358 21851174 0.987084384 40 342 2981 0.971365639 2.042378598 0.167400881 0.198879552 0.370044053 357 10 3 441 3R:21851137-21851363 8 glec FBtr0084157 21850692 21851709 TGATCTCA 8mer-A1 dme-bantam-3p 3R - 21851154 21851329 3'utr glec FlyBase G40253.1 TGGATATGTGCTAATGTTAGACAAGCGATCGACAGCGCCATGCATCCACTATATATAGACTAAACCCCAACCCAAACCAATTCAAGCGTTCTCAGCGTGTTTTCGGGTCCAGATGCACGCGTGTGCCAAAAGTATTTACAATTTACTTTGTGTCATGATCTCAATTATTAAAAACA 230 21851174 0.897124119 29 221 1929 0.962427746 2.045322979 0.161849711 0.382608696 0.589595376 230 11 2 333 3R:21851154-21851329 8 205.5 3446 FBgn0015229 300 18.05666667 27.87 0.685 11.3808381 7.373519914 0 0 0 0.1 dme-miR-1008-3p 8mer-A1 AGCTGTGA 3R 22016456 22016463 - 3R_22016456_22016463_- 0.642005118 0.642211531 0.642108325 0.000145947 CG6439 FBtr0084190 22016389 22016987 3R - 22016450 22016491 3'utr CG6439 FlyBase G53277.1 ATGGCTTTGAGTGGACCCACTCCACTGGAGCTGTGAGAAAGA 7 22016466 0.862281452 3 7 43 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3R:22016450-22016491 8 CG6439 FBtr0084190 22016389 22016987 AGCTGTGA 8mer-A1 dme-miR-1008-3p 3R - 22016451 22016484 3'utr CG6439 FlyBase G40259.1 TGAGTGGACCCACTCCACTGGAGCTGTGAGAAAG 5 22016466 0.930631675 3 5 18 1 0.903089987 0.125 0.4 0.625 5 0 0 8 3R:22016451-22016484 8 6 3447 FBgn0038922 288 18.82 28.82333333 0.020833333 0.318809777 0.208164681 3 3 3 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 3R 22029354 22029359 + 3R_22029354_22029359_+ 0.943282894 0.901618609 0.922450751 0.029461109 ND42 FBtr0084172|FBtr0084173|FBtr0335194 22029310|22029310|22029310 22029393|22029393|22029393 3R + 22029317 22029366 3'utr ND42 FlyBase G44578.1 TTTTGCTATGCTTTCGAGTTGAAATCACCTGGCGAAATGTGTTAATTATC 12 22029335 0.810499307 4 11 95 0.842105263 0.602059991 0.105263158 0.416666667 0.631578947 12 0 3 16 3R:22029317-22029366 6 ND42 FBtr0084172|FBtr0084173|FBtr0335194 22029310|22029310|22029310 22029393|22029393|22029393 TGTGTT 6mer3-8 dme-miR-317-3p 3R + 22029311 22029372 3'utr ND42 FlyBase G33675.1 GAGGGTTTTTGCTATGCTTTCGAGTTGAAATCACCTGGCGAAATGTGTTAATTATCTAATAA 12 22029362 0.987103162 5 10 92 0.947368421 1.255272505 0.157894737 0.416666667 0.631578947 12 1 0 18 3R:22029311-22029372 6 7.5 3448 FBgn0019957 272.6666667 23.35333333 35.85333333 0.027506112 0.321153297 0.209185571 19 -8 5.5 0.1 dme-miR-184-5p 8mer-A1 TGATAAGA 3R 22077747 22077754 + 3R_22077747_22077754_+ 0.601203955 0.601201303 0.601202629 1.91E-06 how FBtr0301402|FBtr0335195|FBtr0301401|FBtr0084177 22074557|22074557|22074557|22074557 22078463|22079321|22079321|22079321 3R + 22077727 22077758 3'utr how FlyBase G44601.1 AAGGCAATTAAGCAAACGATTGATAAGAGAAT 5 22077746 0.889513448 2 4 14 1 0.698970004 0 0 0 5 0 0 5 3R:22077727-22077758 8 how FBtr0301401|FBtr0084177|FBtr0301402|FBtr0335195 22074557|22074557|22074557|22074557 22079321|22079321|22078463|22079321 TGATAAGA 8mer-A1 dme-miR-184-5p 3R + 22077727 22077759 3'utr how FlyBase G33689.1 AAGGCAATTAAGCAAACGATTGATAAGAGAATC 5 22077746 0.876565913 2 5 15 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:22077727-22077759 8 4.5 3449 FBgn0264491 669.8 25.87 39.62333333 0.006718423 0.173946656 0.113569446 1 1 1 0.1 dme-miR-33-5p 7mer-A1 AATGCAA 3R 22077848 22077854 + 3R_22077848_22077854_+ 0.656002288 0.694207887 0.675105088 0.027015439 how FBtr0301402|FBtr0335195|FBtr0301401|FBtr0084177 22074557|22074557|22074557|22074557 22078463|22079321|22079321|22079321 3R + 22077824 22077860 3'utr how FlyBase G44602.1 AGTTCAACGAACAAAAACATACTTAATGCAAGCATAT 31 22077846 0.664302466 3 31 124 1 1.531478917 0 0.096774194 0.176470588 31 0 0 34 3R:22077824-22077860 7 how FBtr0301401|FBtr0084177|FBtr0301402|FBtr0335195 22074557|22074557|22074557|22074557 22079321|22079321|22078463|22079321 AATGCAA 7mer-A1 dme-miR-33-5p 3R + 22077803 22077873 3'utr how FlyBase G33690.1 CAAGTTAGTTCTTAGTGTAAAAGTTCAACGAACAAAAACATACTTAATGCAAGCATATACATATATATATA 17 22077846 0.962764322 4 15 85 0.9 0.954242509 0 0.470588235 0.7 17 1 2 27 3R:22077803-22077873 7 23 3450 FBgn0264491 669.8 25.87 39.62333333 0.034338609 0.889060688 0.580466055 2 2 2 0.1 dme-miR-1003-3p 8mer-A1 ATGTGAGA 3R 22078843 22078850 + 3R_22078843_22078850_+ 0.64353273 0.631446939 0.637489834 0.008545951 how FBtr0335195|FBtr0301401|FBtr0084177 22074557|22074557|22074557 22079321|22079321|22079321 3R + 22078819 22078894 3'utr how FlyBase G44606.1 ACTCTGTTGAAATTATTCTGCGAAATGTGAGACTTATACTCAGAAACAAAACGATGTTCAACCACATGGGAGTTGA 27 22078846 0.969065254 5 26 149 1 1.477121255 0.033333333 0.111111111 0.2 27 0 0 30 3R:22078819-22078894 8 how FBtr0301401|FBtr0084177|FBtr0335195 22074557|22074557|22074557 22079321|22079321|22079321 ATGTGAGA 8mer-A1 dme-miR-1003-3p 3R + 22078809 22078862 3'utr how FlyBase G33692.1 GTATACAGAAACTCTGTTGAAATTATTCTGCGAAATGTGAGACTTATACTCAGA 25 22078846 0.964281605 4 25 135 1 1.51851394 0.03030303 0.24 0.424242424 25 0 0 33 3R:22078809-22078862 8 24.5 3451 FBgn0264491 669.8 25.87 39.62333333 0.036578083 0.947042907 0.618322537 -3 -3 -3 0.1 dme-miR-1012-3p 7mer-m8 TTGACTA 3R 22364500 22364506 + 3R_22364500_22364506_+ 0.631328508 0.631275344 0.631301926 3.76E-05 Muted FBtr0110878|FBtr0344526 22363523|22363523 22364580|22364580 3R + 22364474 22364535 stop_codon Muted FlyBase G44628.1 TCAAGTCCAGACATTGAAACCCCATGTTGACTAGATAGATGATCTGCGAGTAAAAATCGTTC 8 22364513 0.977173596 2 7 51 1 1.079181246 0 0.375 0.583333333 8 0 0 12 3R:22364474-22364535 7 Muted FBtr0344526|FBtr0110878 22363523|22363523 22364580|22364580 TTGACTA 7mer-m8 dme-miR-1012-3p 3R + 22364466 22364524 stop_codon Muted FlyBase G33710.1 GAGGGAAGTCAAGTCCAGACATTGAAACCCCATGTTGACTAGATAGATGATCTGCGAGT 9 22364513 0.957884778 5 9 44 1 1.113943352 0.153846154 0.444444444 0.615384615 9 0 0 13 3R:22364466-22364524 7 7 3452 FBgn0083967 164.1666667 13.59 20.94666667 0.042639594 0.515084621 0.33418205 -13 -13 -13 0.1 dme-miR-980-3p 6mer2-7 GCAGCT 3R 22372514 22372519 + 3R_22372514_22372519_+ 0.97254668 0.999596277 0.986071479 0.019126956 PyK FBtr0084213|FBtr0084214 22372480|22372480 22372746|22372746 3R + 22372472 22372621 stop_codon PyK FlyBase G44639.1 CGTCGAATAAATTCTGCCGCTCAGGAAGTACCTGGATGCGTCGCAGCTGCCGCGGGCGTCGCGTTGATTACTGTTAATAACCAAGTTAATTTATTAATTACACAATATTCGGAATATTGGAAACTGCAGGAGGCTGCTGGAACCGCTGTC 68 22372507 0.824475925 20 56 358 0.820512821 1.329058719 0.371794872 0.147058824 0.256410256 68 12 2 64 3R:22372472-22372621 6 PyK FBtr0084213|FBtr0084214 22372480|22372480 22372746|22372746 GCAGCT 6mer2-7 dme-miR-980-3p 3R + 22372479 22372553 stop_codon PyK FlyBase G33723.1 TAAATTCTGCCGCTCAGGAAGTACCTGGATGCGTCGCAGCTGCCGCGGGCGTCGCGTTGATTACTGTTAATAACC 34 22372519 0.882833144 10 33 171 0.977777778 1.643452676 0.333333333 0.294117647 0.466666667 34 1 0 44 3R:22372479-22372553 6 29.5 3453 FBgn0267385 2164.02 133.4933333 203.1566667 0.013632037 0.220984818 0.145208132 7 -5 1 0.1 dme-miR-184-3p 7mer-m8 TCCGTCC 3R 22418799 22418805 + 3R_22418799_22418805_+ 0.661615187 0.661614473 0.66161483 4.95E-07 lqfR FBtr0299515 22418577 22419051 3R + 22418774 22418829 3'utr lqfR FlyBase G44679.1 CCGGATCAAACCCATTAATTCCACATCCGTCCTGATCGTCCACTCGGAATTTGAAA 51 22418806 0.968644362 7 46 328 0.918032787 1.447158031 0.180327869 0.117647059 0.262295082 51 4 1 56 3R:22418774-22418829 7 lqfR FBtr0299515 22418577 22419051 TCCGTCC 7mer-m8 dme-miR-184-3p 3R + 22418788 22418826 3'utr lqfR FlyBase G33751.1 TTAATTCCACATCCGTCCTGATCGTCCACTCGGAATTTG 24 22418806 0.713692323 4 21 148 0.842105263 1.505149978 0.131578947 0.458333333 0.657894737 24 6 0 32 3R:22418788-22418826 7 37 3454 FBgn0261279 676.23 25.48666667 39.00333333 0.054715112 1.451739472 0.948636869 -7 -7 -7 0.1 dme-miR-11-3p 7mer-m1 TGTGATG 3R 22422748 22422754 + 3R_22422748_22422754_+ 0.570579478 0.571733478 0.571156478 0.000816001 mats FBtr0084229|FBtr0345205|FBtr0337044 22422673|22422673|22422673 22422846|22422846|22423302 3R + 22422674 22422802 3'utr mats FlyBase G44686.1 GGAATCACTGCATGGAGCCGCGAATTTTCGCGATTCCGGCGGCGGTGGTGGTGGTCTGCGCTTGCAGTTGGACTTGTGATGAAAGCGCTCTGGCAGACTCGTGTATTACGCTTTAGTTAGTTACCGCCA 98 22422747 0.97055308 19 92 744 0.928571429 1.539912085 0.303571429 0.12244898 0.232142857 98 6 2 104 3R:22422674-22422802 7 mats FBtr0084229|FBtr0345205|FBtr0337044 22422673|22422673|22422673 22422846|22422846|22423302 TGTGATG 7mer-m1 dme-miR-11-3p 3R + 22422700 22422795 3'utr mats FlyBase G33759.1 TTCGCGATTCCGGCGGCGGTGGTGGTGGTCTGCGCTTGCAGTTGGACTTGTGATGAAAGCGCTCTGGCAGACTCGTGTATTACGCTTTAGTTAGTT 78 22422747 0.779046785 15 74 549 0.937007874 1.598425707 0.417322835 0.41025641 0.637795276 78 6 2 119 3R:22422700-22422795 7 63.5 3455 FBgn0038965 132.6666667 9.696666667 14.72333333 0.478643216 6.548642145 4.312882047 1 1 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 22460604 22460610 + 3R_22460604_22460610_+ 0.82328684 0.823286683 0.823286762 7.07E-08 CG34376 FBtr0112609 22460499 22460749 3R + 22460515 22460626 3'utr CG34376 FlyBase G44706.1 AAATAGCAGGTCAAATGACAGTTAAGTACAAAAGTGGAATGATTGCAATAATACTCAAATACACTAAAGACGGCGTAACCAAAACAATTCCAAAGAATTTAGTTAATACATA 54 22460602 0.889745512 6 53 297 0.983050847 1.462397998 0.06779661 0.074074074 0.152542373 54 0 1 58 3R:22460515-22460626 7 CG34376 FBtr0112609 22460499 22460749 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 22460567 22460630 3'utr CG34376 FlyBase G33775.1 ACTCAAATACACTAAAGACGGCGTAACCAAAACAATTCCAAAGAATTTAGTTAATACATAATAA 24 22460602 0.969706051 2 23 129 0.974358974 1.579783597 0 0.5 0.692307692 24 1 0 38 3R:22460567-22460630 7 31.5 3456 FBgn0085405 134.82 6.636666667 10.25333333 0.23364486 4.746358614 3.072171651 2 2 2 0.1 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 22460697 22460704 + 3R_22460697_22460704_+ 0.622769674 0.622772151 0.622770912 1.77E-06 CG34376 FBtr0112609 22460499 22460749 3R + 22460672 22460727 3'utr CG34376 FlyBase G44707.1 TCGTTTTTATTATTGTACGTTGCATTAGCTTTACACTGTAATAAATGTTGAATTTG 13 22460696 0.913471599 2 11 128 0.882352941 0.698970004 0.588235294 0.230769231 0.411764706 13 0 2 15 3R:22460672-22460727 8 CG34376 FBtr0112609 22460499 22460749 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R + 22460670 22460712 3'utr CG34376 FlyBase G33776.1 TATCGTTTTTATTATTGTACGTTGCATTAGCTTTACACTGTAA 10 22460696 0.98369017 2 10 82 1 1.079181246 0.333333333 0.2 0.333333333 10 0 0 12 3R:22460670-22460712 8 10.5 3457 FBgn0085405 134.82 6.636666667 10.25333333 0.07788162 1.582119538 1.024057217 1 1 1 0.1 dme-miR-1006-3p 7mer-A1 GAATTTA 3R 22464083 22464089 + 3R_22464083_22464089_+ 0.82334956 0.82334956 0.82334956 0 AP-2mu FBtr0084253|FBtr0301866|FBtr0084252 22464039|22464039|22464039 22464603|22464603|22464603 3R + 22464068 22464106 5'utr AP-2mu FlyBase G44715.1 AAGATTATCACAATTGAATTTAACGAGATGAATGGAGAA 6 22464082 0.727082637 3 4 36 0.875 0.84509804 0.25 0.333333333 0.5 6 1 0 7 3R:22464068-22464106 7 AP-2mu FBtr0301866|FBtr0084252|FBtr0084253 22464039|22464039|22464039 22464603|22464603|22464603 GAATTTA 7mer-A1 dme-miR-1006-3p 3R + 22464048 22464098 5'utr AP-2mu FlyBase G33781.1 AAGCATCCCCATCACGGAGCAAGATTATCACAATTGAATTTAACGAGATGA 6 22464072 0.965656417 4 6 31 1 1.041392685 0.090909091 0.5 0.727272727 6 0 0 11 3R:22464048-22464098 7 5 3458 FBgn0263351 730.8 44.74666667 67.98333333 0.006841817 0.111740167 0.073547438 1 11 6 0.1 dme-miR-283-5p 7mer-m8 TGATATT 3R 22464543 22464549 + 3R_22464543_22464549_+ 0.620184763 0.6202035 0.620194132 1.32E-05 AP-2mu FBtr0084253|FBtr0301866|FBtr0084252 22464039|22464039|22464039 22464603|22464603|22464603 3R + 22464523 22464597 3'utr AP-2mu FlyBase G44719.1 TCTGTCAGCGCTATCAATATTGATATTCAAGTGTTAATAATATTCGAATTGTTTAATAAATAAATTAGCATGATA 29 22464542 0.974462635 3 27 254 0.942857143 1.51851394 0.457142857 0.206896552 0.342857143 29 2 0 33 3R:22464523-22464597 7 AP-2mu FBtr0301866|FBtr0084252|FBtr0084253 22464039|22464039|22464039 22464603|22464603|22464603 TGATATT 7mer-m8 dme-miR-283-5p 3R + 22464513 22464561 3'utr AP-2mu FlyBase G33784.2 AGACCAAAACTCTGTCAGCGCTATCAATATTGATATTCAAGTGTTAATA 15 22464542 0.747257157 5 13 125 0.956521739 1.342422681 0.304347826 0.4 0.608695652 15 1 0 22 3R:22464513-22464561 7 19.5 3459 FBgn0263351 730.8 44.74666667 67.98333333 0.026683087 0.435786651 0.286835009 1 1 1 0.1 dme-miR-33-5p 6mer3-8 CAATGC 3R 22607660 22607665 + 3R_22607660_22607665_+ 0.967166346 0.730857298 0.849011822 0.167095696 Efa6 FBtr0334560|FBtr0113396|FBtr0113395|FBtr0302187|FBtr0334559 22605937|22607217|22607217|22606893|22607217 22608471|22608471|22608471|22608842|22608471 3R + 22607609 22607714 3'utr Efa6 FlyBase G44763.1 AAACCCCATCAGGGGTTGCGAGAAAGAGATCATTTGAGACAATTAGACTACCAATGCGATAATTAACGAGGGAGAATTTTACGTTTAAAGGTCGTTCATCAGAAGA 242 22607651 0.975231158 14 226 1414 0.940766551 2.130333768 0.135888502 0.144628099 0.278745645 242 16 1 270 3R:22607609-22607714 6 Efa6 FBtr0113396|FBtr0113395|FBtr0302187|FBtr0334559|FBtr0334560 22607217|22607217|22606893|22607217|22605937 22608471|22608471|22608842|22608471|22608471 CAATGC 6mer3-8 dme-miR-33-5p 3R + 22607609 22607713 3'utr Efa6 FlyBase G33818.1 AAACCCCATCAGGGGTTGCGAGAAAGAGATCATTTGAGACAATTAGACTACCAATGCGATAATTAACGAGGGAGAATTTTACGTTTAAAGGTCGTTCATCAGAAG 141 22607651 0.977317959 15 125 816 0.872727273 1.505149978 0.2 0.397163121 0.613636364 141 23 5 192 3R:22607609-22607713 6 141 3460 FBgn0051158 976.3733333 19.19333333 29.44333333 0.144411974 7.346300799 4.788859957 9 9 9 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 3R 22607969 22607974 + 3R_22607969_22607974_+ 0.545143434 0.61423664 0.579690037 0.04885627 Efa6 FBtr0334560|FBtr0334560|FBtr0113396|FBtr0113396|FBtr0113395|FBtr0113395|FBtr0302187|FBtr0302187|FBtr0334559|FBtr0334559 22605937|22605937|22607217|22607217|22607217|22607217|22606893|22606893|22607217|22607217 22608471|22608471|22608471|22608471|22608471|22608471|22608842|22608842|22608471|22608471 3R + 22607862 22608007 3'utr Efa6 FlyBase G44765.1 TATCGTTCATATTTGCTCCGCCAAAGATTCTGCTGGACGGCTGTTTAGGAACGAGAATGAAAACTGCTTATACACATAGACTTATTATTACAAGAGTTGATAAACAATACTTACATCATTACCTATGCTATCATTATAAATGATAA 234 22607980 0.891425755 19 227 1812 0.971153846 1.879382637 0.022435897 0.243589744 0.432692308 234 6 3 303 3R:22607862-22608007 6 Efa6 FBtr0113396|FBtr0113396|FBtr0113395|FBtr0113395|FBtr0302187|FBtr0302187|FBtr0334559|FBtr0334559|FBtr0334560|FBtr0334560 22607217|22607217|22607217|22607217|22606893|22606893|22607217|22607217|22605937|22605937 22608471|22608471|22608471|22608471|22608842|22608842|22608471|22608471|22608471|22608471 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 3R + 22607967 22608007 3'utr Efa6 FlyBase G33820.1 AATACTTACATCATTACCTATGCTATCATTATAAATGATAA 46 22607980 0.736390315 4 43 416 0.935064935 1.255272505 0 0.456521739 0.675324675 46 2 3 72 3R:22607967-22608007 6 71 3461 FBgn0051158 976.3733333 19.19333333 29.44333333 0.072718086 3.699201111 2.411411751 -11 -11 -11 0.1 dme-miR-932-5p 7mer-A1 GAATTGA 3R 22608087 22608093 + 3R_22608087_22608093_+ 0.823348788 0.823349562 0.823349175 5.66E-07 Efa6 FBtr0334560|FBtr0113396|FBtr0113395|FBtr0302187|FBtr0334559 22605937|22607217|22607217|22606893|22607217 22608471|22608471|22608471|22608842|22608471 3R + 22608024 22608122 3'utr Efa6 FlyBase G44766.1 AATGAACAATATCTCTACACAACCACAAGATGGAGAACATCGGCAGTAACAATAACGAAATGAGAATTGAGAAGAGGACAAGCGCATTAGCATTAAGCT 23 22608090 0.749156598 9 22 62 1 1.431363764 0.222222222 0.130434783 0.259259259 23 0 0 27 3R:22608024-22608122 7 Efa6 FBtr0113396|FBtr0113395|FBtr0302187|FBtr0334559|FBtr0334560 22607217|22607217|22606893|22607217|22605937 22608471|22608471|22608842|22608471|22608471 GAATTGA 7mer-A1 dme-miR-932-5p 3R + 22608076 22608107 3'utr Efa6 FlyBase G33821.1 TAACGAAATGAGAATTGAGAAGAGGACAAGCG 6 22608090 0.796929093 3 6 13 1 1 0.8 0.5 0.7 6 0 0 10 3R:22608076-22608107 7 8 3462 FBgn0051158 976.3733333 19.19333333 29.44333333 0.008193587 0.416811393 0.271708366 -3 -3 -3 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 3R 22608670 22608675 + 3R_22608670_22608675_+ 0.995083797 0.999998074 0.997540935 0.003474935 Efa6 FBtr0302187 22606893 22608842 3R + 22608632 22608719 3'utr Efa6 FlyBase G44769.1 AGGGAAACAAGAAGACGAACGTGGAGACGGTGATTTTTATGTGAACATTTATTACTAACTGATAAGCTTTGATTAAACTTAGGAAAGC 25 22608666 0.982650419 7 24 180 0.939393939 1.491361694 0 0.2 0.393939394 25 2 0 31 3R:22608632-22608719 6 Efa6 FBtr0302187 22606893 22608842 ATGTGA 6mer3-8 dme-miR-1003-3p 3R + 22608641 22608681 3'utr Efa6 FlyBase G33823.1 AGAAGACGAACGTGGAGACGGTGATTTTTATGTGAACATTT 15 22608667 0.902985717 4 15 101 1 1.278753601 0 0.266666667 0.421052632 15 0 0 19 3R:22608641-22608681 6 5 3463 FBgn0051158 976.3733333 19.19333333 29.44333333 0.005120992 0.260507121 0.169817729 4 3 3.5 0.1 dme-miR-14-3p 7mer-A1 AGACTGA 3R 22681901 22681907 + 3R_22681901_22681907_+ 0.823337343 0.823342021 0.823339682 3.32E-06 wake FBtr0344409|FBtr0344403|FBtr0344405|FBtr0344407|FBtr0344408|FBtr0344406|FBtr0344404 22681578|22681578|22681578|22681578|22681578|22681578|22681578 22682176|22682176|22683827|22682176|22682176|22682176|22682176 3R + 22681880 22681923 3'utr wake FlyBase G44782.1 TCGTTGACCAATTCCAGAATTAGACTGAATTACTTATGTATGCT 170 22681899 0.842890564 7 166 1175 0.971962617 2.318063335 0.08411215 0.223529412 0.38317757 170 6 0 208 3R:22681880-22681923 7 wake FBtr0344408|FBtr0344406|FBtr0344404|FBtr0344409|FBtr0344403|FBtr0344405|FBtr0344407 22681578|22681578|22681578|22681578|22681578|22681578|22681578 22682176|22682176|22682176|22682176|22682176|22683827|22682176 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 22681879 22681941 3'utr wake FlyBase G33830.1 ATCGTTGACCAATTCCAGAATTAGACTGAATTACTTATGTATGCTGCAATGGCAAACTGATGA 104 22681899 0.980325128 7 101 715 0.981012658 1.889301703 0.139240506 0.375 0.588607595 104 2 1 155 3R:22681879-22681941 7 135.5 3464 FBgn0266418 402.2066667 8.453333333 12.89666667 0.336891482 16.02917981 10.50659085 2 2 2 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 3R 22710975 22710980 - 3R_22710975_22710980_- 0.994779999 0.729945945 0.862362972 0.187265988 wge FBtr0310427|FBtr0310426 22710881|22710881 22711715|22711715 3R - 22710971 22711084 3'utr wge FlyBase G53471.1 TATAAATGTAACAATTCAATGTGATAGCAAAACAAAACCAGATGTTGATGTGTACAGAGGAGAGAATAAGTATAGATGATAAATAAGAGATCAAGCAGAATGTGTGTGTTGAAT 37 22710982 0.880243704 12 34 212 0.906976744 1.290034611 0.11627907 0.135135135 0.255813953 37 3 1 39 3R:22710971-22711084 6 wge FBtr0310426|FBtr0310427 22710881|22710881 22711715|22711715 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 22710966 22711045 3'utr wge FlyBase G40411.1 AGATGTTGATGTGTACAGAGGAGAGAATAAGTATAGATGATAAATAAGAGATCAAGCAGAATGTGTGTGTTGAATATTTA 13 22710979 0.805787125 8 13 78 1 1.342422681 0.136363636 0.461538462 0.681818182 13 0 0 22 3R:22710966-22711045 6 6.5 3465 FBgn0051151 1493.583333 28.87666667 44.59333333 0.00435195 0.225095233 0.145761698 2 -1 0.5 0.1 dme-miR-184-5p 6mer3-8 TGATAA 3R 22711003 22711008 - 3R_22711003_22711008_- 0.967793722 0.997078591 0.982436156 0.020707551 wge FBtr0310427|FBtr0310426 22710881|22710881 22711715|22711715 3R - 22710971 22711084 3'utr wge FlyBase G53471.1 TATAAATGTAACAATTCAATGTGATAGCAAAACAAAACCAGATGTTGATGTGTACAGAGGAGAGAATAAGTATAGATGATAAATAAGAGATCAAGCAGAATGTGTGTGTTGAAT 37 22711018 0.880243704 12 34 212 0.906976744 1.290034611 0.11627907 0.135135135 0.255813953 37 3 1 39 3R:22710971-22711084 6 wge FBtr0310426|FBtr0310427 22710881|22710881 22711715|22711715 TGATAA 6mer3-8 dme-miR-184-5p 3R - 22710966 22711045 3'utr wge FlyBase G40411.1 AGATGTTGATGTGTACAGAGGAGAGAATAAGTATAGATGATAAATAAGAGATCAAGCAGAATGTGTGTGTTGAATATTTA 13 22711017 0.805787125 8 13 78 1 1.342422681 0.136363636 0.461538462 0.681818182 13 0 0 22 3R:22710966-22711045 6 10 3466 FBgn0051151 1493.583333 28.87666667 44.59333333 0.006695308 0.346300358 0.224248767 10 9 9.5 0.1 dme-miR-79-3p 7mer-A1 AGCTTTA 3R 22724994 22725000 - 3R_22724994_22725000_- 0.78860193 0.756241621 0.772421776 0.022882188 CG4813 FBtr0084326 22724882 22725072 3R - 22724980 22725024 3'utr CG4813 FlyBase G53514.1 AAAACAGGCTTTGCATCCCGACGCAGCTTTAGATGATAATCCCCT 40 22724996 0.740100114 4 37 241 0.916666667 1.643452676 0.125 0.175 0.3125 40 4 0 44 3R:22724980-22725024 7 CG4813 FBtr0084326 22724882 22725072 AGCTTTA 7mer-A1 dme-miR-79-3p 3R - 22724980 22725030 3'utr CG4813 FlyBase G40442.1 CGCCATAAAACAGGCTTTGCATCCCGACGCAGCTTTAGATGATAATCCCCT 38 22724996 0.966710075 6 37 222 0.983333333 1.770852012 0.166666667 0.447368421 0.65 38 1 0 59 3R:22724980-22725030 7 35.5 3467 FBgn0039013 145 11.45 17.42 0.244827586 3.100436681 2.037887486 -4 -4 -4 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 3R 22734034 22734040 - 3R_22734034_22734040_- 0.78290264 0.782905723 0.782904182 2.19E-06 Dcr-1 FBtr0084324 22734005 22734108 3R - 22734027 22734064 3'utr Dcr-1 FlyBase G53522.1 TTTTTAGACATAAGAACTTTAATTGTACAAATCTTAAA 11 22734042 0.759029527 3 11 110 1 1.041392685 0 0 0 11 0 0 11 3R:22734027-22734064 7 Dcr-1 FBtr0084324 22734005 22734108 GTACAAA 7mer-A1 dme-miR-305-5p 3R - 22734006 22734064 3'utr Dcr-1 FlyBase G40449.1 TTTTTAGACATAAGAACTTTAATTGTACAAATCTTAAATAGATTGTCTATGGTCGAATA 14 22734042 0.985401633 5 14 130 1 1.301029996 0 0.285714286 0.5 14 0 0 20 3R:22734006-22734064 7 11.5 3468 FBgn0039016 718.3333333 12.47 19.05666667 0.016009281 0.922213312 0.603463355 2 2 2 0.1 dme-miR-92b-3p 6mer2-7 TGCAAT 3R 22734092 22734097 - 3R_22734092_22734097_- 0.99999953 0.999999922 0.999999726 2.83E-07 Dcr-1 FBtr0084324 22734005 22734108 3R - 22734068 22734137 stop_codon Dcr-1 FlyBase G53523.1 AGCAGGGCTTGATAGCCAAAAAAGACTAAGAAGTCATCGCTGCAATCGTGTTTCATTAGATTTAATGATT 18 22734086 0.920577005 8 17 146 0.95 1.278753601 0.2 0.055555556 0.15 18 1 0 19 3R:22734068-22734137 6 Dcr-1 FBtr0084324 22734005 22734108 TGCAAT 6mer2-7 dme-miR-92b-3p 3R - 22734068 22734181 stop_codon Dcr-1 FlyBase G40450.1 TGCCAAGTGCACGGCGGCCAAATGCGCATTGCGCCAACTCAAAAAGCAGGGCTTGATAGCCAAAAAAGACTAAGAAGTCATCGCTGCAATCGTGTTTCATTAGATTTAATGATT 19 22734083 0.986918323 8 16 138 0.807692308 0.720159303 0.153846154 0.315789474 0.5 19 2 3 21 3R:22734068-22734181 6 10 3469 FBgn0039016 718.3333333 12.47 19.05666667 0.013921114 0.801924619 0.524750743 -11 -14 -12.5 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 3R 22746531 22746536 + 3R_22746531_22746536_+ 0.999999977 0.945375988 0.972687982 0.038625001 HP1c FBtr0084309 22746429 22746605 3R + 22746493 22746565 3'utr HP1c FlyBase G44813.1 TGTATAGCTATCTGAAACCACTGGGTTCGTCCAGATTCATGTGACCCAACTGGCCGGAGCGAAAGAAGTGAAT 13 22746543 0.897039219 6 12 40 0.923076923 1.079181246 0.153846154 0 0 13 1 0 12 3R:22746493-22746565 6 HP1c FBtr0084309 22746429 22746605 ATGTGA 6mer3-8 dme-miR-1003-3p 3R + 22746498 22746581 3'utr HP1c FlyBase G33852.1 AGCTATCTGAAACCACTGGGTTCGTCCAGATTCATGTGACCCAACTGGCCGGAGCGAAAGAAGTGAATGAACTTTCGCGCGGCC 10 22746543 0.89806829 4 9 28 1 1.176091259 0.2 0.3 0.533333333 10 0 0 15 3R:22746498-22746581 6 5.5 3470 FBgn0039019 227.0466667 28.62 43.55666667 0.024224095 0.192173305 0.126272289 -12 -12 -12 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 22793921 22793926 + 3R_22793921_22793926_+ 0.999714036 0.999986228 0.999850132 0.000192474 CG7029 FBtr0310037|FBtr0113271|FBtr0344297|FBtr0084312|FBtr0310038|FBtr0113270 22792678|22792678|22792678|22792678|22792678|22792678 22794030|22794030|22794030|22794030|22794030|22794030 3R + 22793849 22793959 3'utr CG7029 FlyBase G44849.1 TGTATAGCTACTCTTATTGTATTATGTACAAGCGGACGAAACACATATTATAGATTTGCGGGAGAATTTATCACCAAATGGATATGCGGGAGTATATTATGTATTAAAACG 26 22793931 0.902254448 13 25 173 0.962962963 1.113943352 0.259259259 0.038461538 0.074074074 26 0 1 26 3R:22793849-22793959 6 CG7029 FBtr0310038|FBtr0113270|FBtr0344297|FBtr0084312|FBtr0310037|FBtr0113271 22792678|22792678|22792678|22792678|22792678|22792678 22794030|22794030|22794030|22794030|22794030|22794030 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 22793911 22793956 3'utr CG7029 FlyBase G33878.2 AGAATTTATCACCAAATGGATATGCGGGAGTATATTATGTATTAAA 10 22793931 0.980977883 5 8 48 1 1.176091259 0 0.4 0.6 10 0 0 15 3R:22793911-22793956 6 10.5 3471 FBgn0039026 1187.603333 21.31 32.52666667 0.008841336 0.49272642 0.322812052 -10 -10 -10 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 3R 23049704 23049710 - 3R_23049704_23049710_- 0.782828551 0.7828447 0.782836626 1.14E-05 p53 FBtr0345262|FBtr0084360|FBtr0301765|FBtr0084359 23049655|23049655|23049655|23049655 23049964|23049964|23049964|23049964 3R - 23049682 23049726 3'utr p53 FlyBase G53557.1 ACAACAAACATACTCTGTACAAAAAAGCCAAAAGTGAATTTATTA 11 23049712 0.724762631 4 11 37 1 1.041392685 0 0 0 11 0 0 11 3R:23049682-23049726 7 p53 FBtr0301765|FBtr0084359|FBtr0345262|FBtr0084360 23049655|23049655|23049655|23049655 23049964|23049964|23049964|23049964 GTACAAA 7mer-A1 dme-miR-305-5p 3R - 23049664 23049726 3'utr p53 FlyBase G40468.1 ACAACAAACATACTCTGTACAAAAAAGCCAAAAGTGAATTTATTAAAGAGTTGTCATATTTTG 8 23049712 0.936389874 6 8 31 1 1.041392685 0.181818182 0.25 0.454545455 8 0 0 11 3R:23049664-23049726 7 7.5 3472 FBgn0039044 93.11333333 6.436666667 9.84 0.080547004 1.165199379 0.762195122 2 2 2 0.1 dme-miR-283-5p 7mer-m8 TGATATT 3R 23049831 23049837 - 3R_23049831_23049837_- 0.620203677 0.620203677 0.620203677 0 p53 FBtr0345262|FBtr0084360|FBtr0301765|FBtr0084359 23049655|23049655|23049655|23049655 23049964|23049964|23049964|23049964 3R - 23049797 23049986 stop_codon p53 FlyBase G53559.1 ACGTGCCTACGAGCTGCCATGACTTCTGATCTGGTCGACAATCTCCCAGGTATCAGATACCTTTGAAATGTGTTGCATCTGTGGGGTATACTACATAGCTATTAGTATCTTAAGTTTGTATTAGTCCTTGTTCGTAAGGCGTTTAACGGTGATATTCCCCTTTTGGCATGTTCGATGGCCGAAAAGAAAA 127 23049832 0.976635608 29 120 1008 0.957055215 1.716003344 0.233128834 0.204724409 0.380368098 127 5 2 156 3R:23049797-23049986 7 p53 FBtr0301765|FBtr0084359|FBtr0345262|FBtr0084360 23049655|23049655|23049655|23049655 23049964|23049964|23049964|23049964 TGATATT 7mer-m8 dme-miR-283-5p 3R - 23049819 23049918 3'utr p53 FlyBase G40469.1 TGTGTTGCATCTGTGGGGTATACTACATAGCTATTAGTATCTTAAGTTTGTATTAGTCCTTGTTCGTAAGGCGTTTAACGGTGATATTCCCCTTTTGGCA 52 23049832 0.742390358 13 49 419 0.921052632 1.544068044 0.223684211 0.346153846 0.552631579 52 5 1 70 3R:23049819-23049918 7 56.5 3473 FBgn0039044 93.11333333 6.436666667 9.84 0.606787428 8.777835318 5.741869919 -5 -5 -5 0.1 dme-miR-14-3p 6mer3-8 AAGACT 3R 23114369 23114374 - 3R_23114369_23114374_- 0.999999983 0.999999939 0.999999961 7.07E-08 Rassf FBtr0084407 23114012 23114672 3R - 23114347 23114394 3'utr Rassf FlyBase G53574.1 CATTCGTTTAGAAAGCGTTTAAGACTTGTAACTAACCAAAAAATAATT 14 23114376 0.980246234 4 13 96 0.947368421 1.255272505 0.157894737 0.214285714 0.421052632 14 1 0 18 3R:23114347-23114394 6 Rassf FBtr0084407 23114012 23114672 AAGACT 6mer3-8 dme-miR-14-3p 3R - 23114323 23114409 3'utr Rassf FlyBase G40479.1 AATTCCAGGCATTTCCATTCGTTTAGAAAGCGTTTAAGACTTGTAACTAACCAAAAAATAATTATTAATCCACAACATTACCATACA 19 23114376 0.98397587 8 18 138 0.964285714 1.130333768 0.178571429 0.421052632 0.607142857 19 0 1 27 3R:23114323-23114409 6 15 3474 FBgn0039055 618.9666667 21.53666667 33.01666667 0.024233938 0.696486612 0.454316002 2 2 2 0.1 dme-miR-305-5p 7mer-m1 GTACAAT 3R 23123990 23123996 - 3R_23123990_23123996_- 0.765586652 0.765586663 0.765586657 0 CG31365 FBtr0084406 23123960 23124296 3R - 23123971 23124006 3'utr CG31365 FlyBase G53587.1 ATAAGACGATGTACAATTTTATAGGCAAATATACGT 5 23123997 0.976482437 3 5 32 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:23123971-23124006 7 CG31365 FBtr0084406 23123960 23124296 GTACAAT 7mer-m1 dme-miR-305-5p 3R - 23123971 23124014 3'utr CG31365 FlyBase G40491.1 AATACCACATAAGACGATGTACAATTTTATAGGCAAATATACGT 13 23123990 0.633657946 4 11 86 0.75 1.176091259 0 0.461538462 0.65 13 5 0 15 3R:23123971-23124014 7 8.5 3475 FBgn0051365 445.6766667 23.35333333 35.95666667 0.019072123 0.363973737 0.236395661 1 -6 -2.5 0.1 dme-miR-970-3p 7mer-m8 TCTTATG 3R 23124001 23124007 + 3R_23124001_23124007_+ 0.658989218 0.658993338 0.658991278 2.90E-06 CenB1A FBtr0084369|FBtr0084368 23123628|23123628 23124217|23124217 3R + 23123971 23124025 3'utr CenB1A FlyBase G44878.1 ACGTATATTTGCCTATAAAATTGTACATCGTCTTATGTGGTATTTATTAAACGAT 7 23124003 0.991194347 5 6 68 0.9 0.954242509 0.2 0.428571429 0.6 7 1 0 9 3R:23123971-23124025 7 CenB1A FBtr0084369|FBtr0084368 23123628|23123628 23124217|23124217 TCTTATG 7mer-m8 dme-miR-970-3p 3R + 23123981 23124018 3'utr CenB1A FlyBase G33900.1 GCCTATAAAATTGTACATCGTCTTATGTGGTATTTATT 5 23124004 0.988207458 3 5 52 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:23123981-23124018 7 5 3476 FBgn0039056 579.2733333 23.55666667 35.98 0.008631504 0.212254139 0.138966092 -2 -3 -2.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 23124213 23124218 - 3R_23124213_23124218_- 0.999560612 0.999752916 0.999656764 0.000135977 CG31365 FBtr0084406 23123960 23124296 3R - 23124095 23124249 3'utr CG31365 FlyBase G53588.1 ATGTTTTACACCTGAAGAGACCAACTTTGATTGATCTGAATATTTTACAACTTTATTCGCGAACCTAGAGTGCTCACAACAGTTGGCACCAAAAATCATCAACATGATAGCGTTAAAACATTTAGAAACATGCAGCATTAAACAGTTTAGCAAAC 47 23124219 0.982773831 13 44 359 0.885245902 1.73239376 0.049180328 0.255319149 0.426229508 47 7 0 54 3R:23124095-23124249 6 CG31365 FBtr0084406 23123960 23124296 TGATCT 6mer3-8 dme-bantam-3p 3R - 23124197 23124258 3'utr CG31365 FlyBase G40492.1 TGGACCACCATGTTTTACACCTGAAGAGACCAACTTTGATTGATCTGAATATTTTACAACTT 36 23124219 0.747354352 6 36 310 1 1.740362689 0.109090909 0.388888889 0.6 36 0 0 55 3R:23124197-23124258 6 31 3477 FBgn0051365 445.6766667 23.35333333 35.95666667 0.069557153 1.327433628 0.862148883 1 1 1 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3R 23151617 23151623 - 3R_23151617_23151623_- 0.416828277 0.443130611 0.429979444 0.018598535 unk FBtr0084402|FBtr0305573|FBtr0337052 23151562|23150239|23149651 23153939|23153939|23153939 3R - 23151574 23151647 3'utr unk FlyBase G53602.1 ACGCTACTGTAAGAGTGATTTTTATGTGATTTTGAAACTACTTGAATATGTGATCCAGAAATATATAAAAAACA 18 23151628 0.971416864 8 18 158 1 1.342422681 0.363636364 0.222222222 0.363636364 18 0 0 22 3R:23151574-23151647 7 unk FBtr0305573|FBtr0337052|FBtr0084402 23150239|23149651|23151562 23153939|23153939|23153939 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 23151611 23151647 3'utr unk FlyBase G40506.1 ACGCTACTGTAAGAGTGATTTTTATGTGATTTTGAAA 16 23151616 0.775366016 7 14 167 0.896551724 1.113943352 0.275862069 0.625 0.793103448 16 2 1 26 3R:23151611-23151647 7 9 3478 FBgn0004395 913.0833333 29.83666667 45.42666667 0.009856713 0.301642275 0.198121515 5 -7 -1 0.1 dme-miR-305-5p 6mer2-7 GTACAA 3R 23152598 23152603 - 3R_23152598_23152603_- 0.999885813 0.999476908 0.99968136 0.000289136 unk FBtr0305572|FBtr0084402|FBtr0305571|FBtr0305573|FBtr0337052 23152090|23151562|23152090|23150239|23149651 23153939|23153939|23153939|23153939|23153939 3R - 23152522 23152621 3'utr unk FlyBase G53605.1 TCCAGCATTTGGCTGATTGTACAAGAACGAATATGAACAGATATATATTTATGGGAAATTTGAACGCAGATTCGATGAGTGTGATGTTGAAAGCATAAAC 11 23152579 0.982151324 7 10 68 0.916666667 0.740362689 0.083333333 0.090909091 0.166666667 11 0 1 11 3R:23152522-23152621 6 unk FBtr0305573|FBtr0337052|FBtr0305571|FBtr0305572|FBtr0084402 23150239|23149651|23152090|23152090|23151562 23153939|23153939|23153939|23153939|23153939 GTACAA 6mer2-7 dme-miR-305-5p 3R - 23152579 23152624 3'utr unk FlyBase G40508.1 AAATCCAGCATTTGGCTGATTGTACAAGAACGAATATGAACAGATA 5 23152605 0.970803386 3 5 25 1 0.84509804 0 0.4 0.571428571 5 0 0 7 3R:23152579-23152624 6 4.5 3479 FBgn0004395 913.0833333 29.83666667 45.42666667 0.004928356 0.150821137 0.099060757 -24 2 -11 0.1 dme-miR-8-3p 6mer2-7 AGTATT 3R 23152636 23152641 - 3R_23152636_23152641_- 0.99999961 0.999972011 0.999985811 1.95E-05 unk FBtr0305572|FBtr0084402|FBtr0305571|FBtr0305573|FBtr0337052 23152090|23151562|23152090|23150239|23149651 23153939|23153939|23153939|23153939|23153939 3R - 23152630 23152714 3'utr unk FlyBase G53606.1 TTTACTTTCATAGTCTCAACTGGACGCTTCCAAATTAGTAAAAGCATAAAATGAATCGTCAATGTCAAAACGTAGTATTTAAGTC 10 23152663 0.952063577 8 9 73 1 1.079181246 0 0.2 0.333333333 10 0 0 12 3R:23152630-23152714 6 unk FBtr0305573|FBtr0337052|FBtr0305571|FBtr0305572|FBtr0084402 23150239|23149651|23152090|23152090|23151562 23153939|23153939|23153939|23153939|23153939 AGTATT 6mer2-7 dme-miR-8-3p 3R - 23152630 23152672 3'utr unk FlyBase G40509.1 AGCATAAAATGAATCGTCAATGTCAAAACGTAGTATTTAAGTC 5 23152635 0.962851323 4 5 28 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:23152630-23152672 6 3 3480 FBgn0004395 913.0833333 29.83666667 45.42666667 0.003285571 0.100547425 0.066040505 22 -6 8 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3R 23152762 23152768 - 3R_23152762_23152768_- 0.521223855 0.521223855 0.521223855 0 unk FBtr0305572|FBtr0084402|FBtr0305571|FBtr0305573|FBtr0337052 23152090|23151562|23152090|23150239|23149651 23153939|23153939|23153939|23153939|23153939 3R - 23152725 23152793 3'utr unk FlyBase G53607.1 ACGTATATAATCTATTAGGTTACTTTGTGATTTGAATAGTGCTTTAAGTACTTACTTTGCAGATGACTT 63 23152762 0.992289151 12 60 681 0.952941176 1.306425028 0.082352941 0.253968254 0.447058824 63 1 3 81 3R:23152725-23152793 7 unk FBtr0305573|FBtr0337052|FBtr0305571|FBtr0305572|FBtr0084402 23150239|23149651|23152090|23152090|23151562 23153939|23153939|23153939|23153939|23153939 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 23152728 23152793 3'utr unk FlyBase G40511.1 ACGTATATAATCTATTAGGTTACTTTGTGATTTGAATAGTGCTTTAAGTACTTACTTTGCAGATGA 47 23152762 0.991115233 9 45 476 0.97260274 1.550228353 0.054794521 0.340425532 0.575342466 47 1 1 71 3R:23152728-23152793 7 53.5 3481 FBgn0004395 913.0833333 29.83666667 45.42666667 0.05859268 1.793095743 1.177722336 -6 -6 -6 0.1 dme-miR-318-3p 7mer-A1 CCAGTGA 3R 23153146 23153152 - 3R_23153146_23153152_- 0.811611175 0.766679136 0.789145155 0.031771793 unk FBtr0305572|FBtr0084402|FBtr0084403|FBtr0305571|FBtr0305573|FBtr0337052 23152090|23151562|23153040|23152090|23150239|23149651 23153939|23153939|23153939|23153939|23153939|23153939 3R - 23153131 23153204 3'utr unk FlyBase G53609.1 AATATATTGTCGCATAGAAGAGCAGAAAACAACCACAAACAAACAAATACCACCAGTGATTTTATATAAGCCGA 69 23153144 0.971357048 9 67 392 0.976470588 1.919078092 0.011764706 0.202898551 0.352941176 69 2 0 83 3R:23153131-23153204 7 unk FBtr0305573|FBtr0337052|FBtr0084403|FBtr0305571|FBtr0305572|FBtr0084402 23150239|23149651|23153040|23152090|23152090|23151562 23153939|23153939|23153939|23153939|23153939|23153939 CCAGTGA 7mer-A1 dme-miR-318-3p 3R - 23153120 23153164 3'utr unk FlyBase G40513.1 AAACAAATACCACCAGTGATTTTATATAAGCCGATTTTCAAACTG 36 23153144 0.634950147 5 34 230 0.961538462 1.698970004 0 0.305555556 0.519230769 36 2 0 50 3R:23153120-23153164 7 46 3482 FBgn0004395 913.0833333 29.83666667 45.42666667 0.050378753 1.541727181 1.012621074 -8 -8 -8 0.1 dme-miR-1012-3p 7mer-m8 TTGACTA 3R 23153237 23153243 - 3R_23153237_23153243_- 0.631525995 0.631513942 0.631519969 8.56E-06 unk FBtr0305572|FBtr0084402|FBtr0084403|FBtr0305571|FBtr0305573|FBtr0337052 23152090|23151562|23153040|23152090|23150239|23149651 23153939|23153939|23153939|23153939|23153939|23153939 3R - 23153224 23153262 3'utr unk FlyBase G53610.1 TTCTAGACACTTTTAGCAATTGACTATTAACAAATTTAT 23 23153236 0.754473532 5 22 188 0.967741935 1.176091259 0 0.347826087 0.516129032 23 0 1 30 3R:23153224-23153262 7 unk FBtr0305573|FBtr0337052|FBtr0084403|FBtr0305571|FBtr0305572|FBtr0084402 23150239|23149651|23153040|23152090|23152090|23151562 23153939|23153939|23153939|23153939|23153939|23153939 TTGACTA 7mer-m8 dme-miR-1012-3p 3R - 23153224 23153254 3'utr unk FlyBase G40514.1 ACTTTTAGCAATTGACTATTAACAAATTTAT 17 23153236 0.854580238 4 17 131 1 1.491361694 0.032258065 0.588235294 0.774193548 17 0 0 31 3R:23153224-23153254 7 20 3483 FBgn0004395 913.0833333 29.83666667 45.42666667 0.021903806 0.670316166 0.440270032 -7 -7 -7 0.1 dme-miR-190-5p 6mer3-8 ACATAT 3R 23153405 23153410 - 3R_23153405_23153410_- 0.998417715 0.996564729 0.997491222 0.001310269 unk FBtr0305572|FBtr0084402|FBtr0084403|FBtr0305571|FBtr0305573|FBtr0337052 23152090|23151562|23153040|23152090|23150239|23149651 23153939|23153939|23153939|23153939|23153939|23153939 3R - 23153279 23153423 3'utr unk FlyBase G53611.1 TTTTTTTTTAACCACATATGTATCTCTATATTTGTATTTAAATATGCTACACTTTCAGTCATATTGTACTTTTCACTAGTATTACATAAGAAATTATGAGAACTAAACAATTACAAGATGTAATTGAATGAAAGATATATAAATA 105 23153405 0.987374535 20 102 911 0.952 2.075546961 0.048 0.161904762 0.296 105 6 0 119 3R:23153279-23153423 6 unk FBtr0305573|FBtr0337052|FBtr0084403|FBtr0305571|FBtr0305572|FBtr0084402 23150239|23149651|23153040|23152090|23152090|23151562 23153939|23153939|23153939|23153939|23153939|23153939 ACATAT 6mer3-8 dme-miR-190-5p 3R - 23153276 23153492 3'utr unk FlyBase G40515.1 GTTTAATATTCAATGTTTAGGCATACATATTTTCTAATCTACTGCACGAATTTGCAATGTCTCATTTATTTTTTTTTTAACCACATATGTATCTCTATATTTGTATTTAAATATGCTACACTTTCAGTCATATTGTACTTTTCACTAGTATTACATAAGAAATTATGAGAACTAAACAATTACAAGATGTAATTGAATGAAAGATATATAAATATAT 90 23153405 0.987709194 27 82 753 0.910447761 2.086359831 0.029850746 0.333333333 0.552238806 90 12 0 122 3R:23153276-23153492 6 47 3484 FBgn0004395 913.0833333 29.83666667 45.42666667 0.051473944 1.57524299 1.034634576 -5 -5 -5 0.1 dme-miR-283-5p 8mer-A1 TGATATTA 3R 23185294 23185301 + 3R_23185294_23185301_+ 0.592189819 0.592188715 0.592189267 7.78E-07 Irk1 FBtr0336479|FBtr0336475|FBtr0336478|FBtr0336476|FBtr0336474|FBtr0336473|FBtr0336477 23184958|23184958|23184958|23184958|23184958|23184958|23184958 23185642|23185562|23185642|23185562|23185642|23185642|23185642 3R + 23185091 23185409 3'utr Irk1 FlyBase G44901.1 GAGCTGCTGCAGCTGTGAACATCCCTCAAAAAAATCCCCCTATCCTGCTGAAGTGGAGGCAATCTGATTGTTATCCACCTATCTACTATACTTACTACTAACCCTGAAACGATTGTACATGTTTATGTCTAGGCTAAGCTGATGAATGATTCACGTTGTTAGCTTTAGCTTTGTGTTGAATTTACTATAGTTAAGTTACAAATTGATATTAACGCAAAGTAAGATGTGAGACCCAGAAACCAAAATGCTGCAACTTAGACAACTAGATAAGTCATTAAACGGCTCACTTAACATGAAATTTATGCGAAGACGCAGCGGA 424 23185293 0.979824116 55 406 2960 0.951219512 1.859909919 0.234521576 0.198113208 0.362101313 424 20 6 507 3R:23185091-23185409 8 Irk1 FBtr0336474|FBtr0336473|FBtr0336477|FBtr0336479|FBtr0336475|FBtr0336478|FBtr0336476 23184958|23184958|23184958|23184958|23184958|23184958|23184958 23185642|23185642|23185642|23185642|23185562|23185642|23185562 TGATATTA 8mer-A1 dme-miR-283-5p 3R + 23185172 23185369 3'utr Irk1 FlyBase G33921.2 TCTACTATACTTACTACTAACCCTGAAACGATTGTACATGTTTATGTCTAGGCTAAGCTGATGAATGATTCACGTTGTTAGCTTTAGCTTTGTGTTGAATTTACTATAGTTAAGTTACAAATTGATATTAACGCAAAGTAAGATGTGAGACCCAGAAACCAAAATGCTGCAACTTAGACAACTAGATAAGTCATTAAA 206 23185293 0.976004611 35 197 1511 0.961805556 1.965358514 0.239583333 0.291262136 0.493055556 206 9 2 277 3R:23185172-23185369 8 120 3485 FBgn0265042 1730.336667 66.08666667 101.7066667 0.069350666 1.815797438 1.17986366 1 1 1 0.1 dme-miR-968-5p 6mer3-8 ACTACT 3R 23186000 23186005 - 3R_23186000_23186005_- 0.999500795 0.999770544 0.999635669 0.000190707 cnc FBtr0306755|FBtr0330372|FBtr0306744|FBtr0306747|FBtr0306754|FBtr0306751|FBtr0306749|FBtr0306745|FBtr0306746|FBtr0336455|FBtr0306750|FBtr0306748|FBtr0306753 23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578 23187443|23187302|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443 3R - 23185978 23186037 3'utr cnc FlyBase G53623.1 AAATTGAAATTGAACTAATTACCTACTATTGTACTACTACGCCTACGGACATAAAAAATA 18 23186008 0.982835979 3 17 132 0.952380952 1.301029996 0 0.166666667 0.285714286 18 1 0 20 3R:23185978-23186037 6 cnc FBtr0306751|FBtr0336455|FBtr0306748|FBtr0306746|FBtr0306750|FBtr0306754|FBtr0306749|FBtr0306745|FBtr0306753|FBtr0306747|FBtr0306744|FBtr0306755|FBtr0330372 23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578 23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187302 ACTACT 6mer3-8 dme-miR-968-5p 3R - 23185984 23186021 3'utr cnc FlyBase G40529.1 AATTACCTACTATTGTACTACTACGCCTACGGACATAA 12 23186008 0.703043382 2 11 79 1 1.342422681 0 0.666666667 0.818181818 12 0 0 22 3R:23185984-23186021 6 13 3486 FBgn0262975 1286.603333 24.08333333 36.96666667 0.010104124 0.539792388 0.35166817 3 3 3 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 23186637 23186642 - 3R_23186637_23186642_- 0.999922736 0.999794397 0.999858567 9.07E-05 cnc FBtr0306755|FBtr0308226|FBtr0330372|FBtr0306744|FBtr0306747|FBtr0308227|FBtr0306752|FBtr0306754|FBtr0306751|FBtr0306749|FBtr0306745|FBtr0306746|FBtr0336455|FBtr0306750|FBtr0306748|FBtr0306753 23185578|23186410|23185578|23185578|23185578|23186410|23186410|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578 23187443|23187443|23187302|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443 3R - 23186607 23186662 3'utr cnc FlyBase G53624.1 TTTACATTTGTAAGCTATATTCTAGTGAAAGATCTACCACAGCGGTGAATAGTTGT 35 23186643 0.945263188 5 35 234 1 1.653212514 0.066666667 0.257142857 0.422222222 35 0 0 45 3R:23186607-23186662 6 cnc FBtr0306751|FBtr0336455|FBtr0306748|FBtr0306746|FBtr0306752|FBtr0306750|FBtr0306754|FBtr0306749|FBtr0306745|FBtr0306753|FBtr0306747|FBtr0308226|FBtr0306744|FBtr0308227|FBtr0306755|FBtr0330372 23185578|23185578|23185578|23185578|23186410|23185578|23185578|23185578|23185578|23185578|23185578|23186410|23185578|23186410|23185578|23185578 23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187302 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R - 23186576 23186684 3'utr cnc FlyBase G40530.1 CATGAATTACGGGCGTAAGACATTTACATTTGTAAGCTATATTCTAGTGAAAGATCTACCACAGCGGTGAATAGTTGTAAATCGTTCTAAACTCATAAGGCATTTATCA 32 23186643 0.979991233 7 31 217 1 1.662757832 0.043478261 0.387096774 0.586956522 31 0 0 46 3R:23186576-23186684 6 28.5 3487 FBgn0262975 1286.603333 24.08333333 36.96666667 0.022151349 1.183391003 0.770964833 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 23187025 23187031 - 3R_23187025_23187031_- 0.7585995 0.754697869 0.756648684 0.002758848 cnc FBtr0306755|FBtr0306755|FBtr0306755|FBtr0308226|FBtr0308226|FBtr0308226|FBtr0330372|FBtr0330372|FBtr0330372|FBtr0306744|FBtr0306744|FBtr0306744|FBtr0306747|FBtr0306747|FBtr0306747|FBtr0308227|FBtr0308227|FBtr0308227|FBtr0306752|FBtr0306752|FBtr0306752|FBtr0306754|FBtr0306754|FBtr0306754|FBtr0306751|FBtr0306751|FBtr0306751|FBtr0306749|FBtr0306749|FBtr0306749|FBtr0306745|FBtr0306745|FBtr0306745|FBtr0306746|FBtr0306746|FBtr0306746|FBtr0336455|FBtr0336455|FBtr0336455|FBtr0306750|FBtr0306750|FBtr0306750|FBtr0306748|FBtr0306748|FBtr0306748|FBtr0306753|FBtr0306753|FBtr0306753 23185578|23185578|23185578|23186410|23186410|23186410|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23186410|23186410|23186410|23186410|23186410|23186410|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578 23187443|23187443|23187443|23187443|23187443|23187443|23187302|23187302|23187302|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443 3R - 23186980 23187085 3'utr cnc FlyBase G53625.1 TGGACAGCGTATGCGAAGCCTTTTACTTAATTGCAATTAATGAAAAACAAAACTTGTGATAAAACAGCTCTTTTACTCCGAAATATTTGCGCCCCAAAGGTCAAGC 77 23187032 0.856437025 8 72 370 0.954022989 1.618048097 0.103448276 0.12987013 0.229885057 77 3 1 83 3R:23186980-23187085 7 cnc FBtr0306751|FBtr0306751|FBtr0306751|FBtr0336455|FBtr0336455|FBtr0336455|FBtr0306748|FBtr0306748|FBtr0306748|FBtr0306746|FBtr0306746|FBtr0306746|FBtr0306752|FBtr0306752|FBtr0306752|FBtr0306750|FBtr0306750|FBtr0306750|FBtr0306754|FBtr0306754|FBtr0306754|FBtr0306749|FBtr0306749|FBtr0306749|FBtr0306745|FBtr0306745|FBtr0306745|FBtr0306753|FBtr0306753|FBtr0306753|FBtr0306747|FBtr0306747|FBtr0306747|FBtr0308226|FBtr0308226|FBtr0308226|FBtr0306744|FBtr0306744|FBtr0306744|FBtr0308227|FBtr0308227|FBtr0308227|FBtr0306755|FBtr0306755|FBtr0306755|FBtr0330372|FBtr0330372|FBtr0330372 23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23186410|23186410|23186410|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23186410|23186410|23186410|23185578|23185578|23185578|23186410|23186410|23186410|23185578|23185578|23185578|23185578|23185578|23185578 23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187302|23187302|23187302 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 23186975 23187133 3'utr cnc FlyBase G40531.1 TGATTATTTGGACTCGTCCAAGTCCGTCTTGCATGGTGTTGTCCCTTCTGGACAGCGTATGCGAAGCCTTTTACTTAATTGCAATTAATGAAAAACAAAACTTGTGATAAAACAGCTCTTTTACTCCGAAATATTTGCGCCCCAAAGGTCAAGCTGACA 59 23187032 0.966387214 14 57 307 0.975308642 1.596597096 0.098765432 0.322033898 0.50617284 59 1 1 79 3R:23186975-23187133 7 53.5 3488 FBgn0262975 1286.603333 24.08333333 36.96666667 0.041582358 2.221453287 1.447249775 1 1 1 0.1 dme-miR-12-5p 7mer-A1 ATACTCA 3R 23254478 23254484 + 3R_23254478_23254484_+ 0.78237183 0.792448969 0.7874104 0.007125656 EloA FBtr0084374|FBtr0084375 23254447|23254447 23255071|23255071 3R + 23254447 23254564 stop_codon EloA FlyBase G44911.1 AGATGCGCTTACTCATTATAGCTACAATCTTATACTCAACTTCTTCAGCGACAACTTAAGCAGCAGCAGTAGCAGCAACCTCGATCTATTAGGCATTCACGGTGGGATTACCTTCCAA 42 23254476 0.978661593 11 41 287 0.97826087 1.653212514 0.195652174 0.095238095 0.173913043 42 1 0 45 3R:23254447-23254564 7 EloA FBtr0084374|FBtr0084375 23254447|23254447 23255071|23255071 ATACTCA 7mer-A1 dme-miR-12-5p 3R + 23254441 23254565 stop_codon EloA FlyBase G33929.1 AACGATAGATGCGCTTACTCATTATAGCTACAATCTTATACTCAACTTCTTCAGCGACAACTTAAGCAGCAGCAGTAGCAGCAACCTCGATCTATTAGGCATTCACGGTGGGATTACCTTCCAAC 30 23254476 0.982136022 9 27 196 0.916666667 1.166331422 0.125 0.4 0.625 30 2 2 44 3R:23254441-23254565 7 20 3489 FBgn0039066 571.72 24.26333333 37.16333333 0.034982159 0.824289051 0.538164858 2 2 2 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 23254605 23254611 + 3R_23254605_23254611_+ 0.801970402 0.801970138 0.80197027 2.12E-07 EloA FBtr0084374|FBtr0084374|FBtr0084374|FBtr0084375|FBtr0084375|FBtr0084375 23254447|23254447|23254447|23254447|23254447|23254447 23255071|23255071|23255071|23255071|23255071|23255071 3R + 23254588 23254644 3'utr EloA FlyBase G44912.1 TCTGAATAAAGTGACATTGTGATACTAGACCTTCTACTTCCCAGTGCGCTGTGGAAT 30 23254604 0.652152423 5 28 193 0.918918919 1.054357662 0.135135135 0.133333333 0.297297297 30 1 2 34 3R:23254588-23254644 7 EloA FBtr0084374|FBtr0084374|FBtr0084374|FBtr0084375|FBtr0084375|FBtr0084375 23254447|23254447|23254447|23254447|23254447|23254447 23255071|23255071|23255071|23255071|23255071|23255071 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 23254584 23254634 3'utr EloA FlyBase G33930.1 CAGGTCTGAATAAAGTGACATTGTGATACTAGACCTTCTACTTCCCAGTGC 26 23254604 0.666304242 6 26 170 1 1.62324929 0.095238095 0.384615385 0.619047619 26 0 0 42 3R:23254584-23254634 7 26 3490 FBgn0039066 571.72 24.26333333 37.16333333 0.045476807 1.071575766 0.699614315 1 1 1 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG 3R 23254924 23254929 + 3R_23254924_23254929_+ 1 0.999909619 0.999954809 6.39E-05 EloA FBtr0084374|FBtr0084375 23254447|23254447 23255071|23255071 3R + 23254904 23254967 3'utr EloA FlyBase G44914.1 AATGTTCTTTGTTCAAAAGGGCTGTGCGTATGTCCAAAATCATAGAGGTTCCAAGCTGTATATA 11 23254930 0.978636255 8 10 70 0.928571429 1.113943352 0.428571429 0.272727273 0.428571429 11 1 0 13 3R:23254904-23254967 6 EloA FBtr0084374|FBtr0084375 23254447|23254447 23255071|23255071 GCTGTG 6mer2-7 dme-miR-1008-3p 3R + 23254910 23254935 3'utr EloA FlyBase G33931.1 CTTTGTTCAAAAGGGCTGTGCGTATG 8 23254932 0.708355348 3 7 49 0.909090909 0.698970004 0.272727273 0.25 0.454545455 8 0 1 10 3R:23254910-23254935 6 8.5 3491 FBgn0039066 571.72 24.26333333 37.16333333 0.014867418 0.350322847 0.228720065 -6 -8 -7 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 23255452 23255457 - 3R_23255452_23255457_- 0.998863805 0.999942703 0.999403254 0.000762898 wda FBtr0084387 23255068 23255493 3R - 23255434 23255480 3'utr wda FlyBase G53644.1 AAGTTCAGCCCGAATTTAGACTTTCTAGTGACGACTTATGTTTGAAA 34 23255464 0.691882377 9 33 263 0.951219512 1.113943352 0.195121951 0.205882353 0.341463415 34 0 2 39 3R:23255434-23255480 6 wda FBtr0084387 23255068 23255493 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R - 23255426 23255479 3'utr wda FlyBase G40547.1 AGTTCAGCCCGAATTTAGACTTTCTAGTGACGACTTATGTTTGAAAATAATTTA 18 23255459 0.965605775 6 17 141 0.954545455 1.021189299 0.045454545 0.222222222 0.363636364 18 0 1 21 3R:23255426-23255479 6 26 3492 FBgn0039067 161 7.11 10.86333333 0.161490683 3.656821378 2.3933722 7 2 4.5 0.1 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3R 23263542 23263548 - 3R_23263542_23263548_- 0.62020397 0.62020403 0.620204 0 orb FBtr0334498 23260608 23265852 3R - 23263525 23263562 3'utr orb FlyBase G53650.1 TTATACAGATAAAATGGTGCTTTAGCTGAATTATTAGT 15 23263541 0.652886182 3 15 115 1 1.204119983 0.0625 0.066666667 0.125 15 0 0 16 3R:23263525-23263562 7 orb FBtr0334498 23260608 23265852 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3R - 23263527 23263562 3'utr orb FlyBase G40552.1 TTATACAGATAAAATGGTGCTTTAGCTGAATTATTA 10 23263548 0.778724095 3 9 78 0.941176471 1.204119983 0.176470588 0.5 0.705882353 10 1 0 16 3R:23263527-23263562 7 12.5 3493 FBgn0004882 75.63666667 1.15 1.746666667 0.165263761 10.86956522 7.15648855 -7 0 -3.5 0.1 dme-miR-283-5p 8mer-A1 TGATATTA 3R 23290837 23290844 - 3R_23290837_23290844_- 0.59217826 0.592192285 0.592185272 9.90E-06 pnt FBtr0334554|FBtr0089717 23290229|23290229 23291364|23291364 3R - 23290818 23290890 3'utr pnt FlyBase G53659.1 AGGATCGAACGTTGATAGAGGCCATAAAGCATGTGTCCCCCAAAAGTGATATTAGAGCGCAACATTTTGTTAT 51 23290839 0.96504244 9 49 258 0.931034483 1.255272505 0.24137931 0.137254902 0.24137931 51 2 2 54 3R:23290818-23290890 8 pnt FBtr0334554|FBtr0089717 23290229|23290229 23291364|23291364 TGATATTA 8mer-A1 dme-miR-283-5p 3R - 23290825 23290893 3'utr pnt FlyBase G40556.1 GCAAGGATCGAACGTTGATAGAGGCCATAAAGCATGTGTCCCCCAAAAGTGATATTAGAGCGCAACATT 29 23290839 0.913230742 9 26 142 0.894736842 1.531478917 0.184210526 0.24137931 0.421052632 29 4 0 34 3R:23290825-23290893 8 33.5 3494 FBgn0003118 3507.63 110.36 169.3033333 0.009550608 0.303552012 0.197869701 -5 -5 -5 0.1 dme-miR-31a-5p 6mer3-8 TCTTGC 3R 23291205 23291210 - 3R_23291205_23291210_- 0.577283593 0.752167029 0.664725311 0.123661238 pnt FBtr0334554|FBtr0089717 23290229|23290229 23291364|23291364 3R - 23291189 23291426 stop_codon pnt FlyBase G53661.1 ACACACCCGAGGAGCTGGTGGCCAAGTATGATCTTAAGATTGAGAAAAAAGATGTGGATTAGCAGCGGAGCAGCGGAGAAGCTGCCTAAAACGGGAACAGCTCCAGGAGATCTGCGCCCAGCCACGGATTGTACTCAACCAACCGCAAAATACTTTCGAGCGTTATTGTTTACCAAGCGTGATGTTAGCTTTTAAGCAGCTACCCCCGATCTGCGATCTTGCAACGAGATTAAAGTGT 2053 23291217 0.880735074 45 2001 11930 0.976993257 2.350071727 0.213407378 0.172917681 0.326457755 2053 48 10 2463 3R:23291189-23291426 6 pnt FBtr0334554|FBtr0089717 23290229|23290229 23291364|23291364 TCTTGC 6mer3-8 dme-miR-31a-5p 3R - 23291182 23291425 stop_codon pnt FlyBase G40558.1 CACACCCGAGGAGCTGGTGGCCAAGTATGATCTTAAGATTGAGAAAAAAGATGTGGATTAGCAGCGGAGCAGCGGAGAAGCTGCCTAAAACGGGAACAGCTCCAGGAGATCTGCGCCCAGCCACGGATTGTACTCAACCAACCGCAAAATACTTTCGAGCGTTATTGTTTACCAAGCGTGATGTTAGCTTTTAAGCAGCTACCCCCGATCTGCGATCTTGCAACGAGATTAAAGTGTTGGCCAA 1586 23291217 0.9721947 50 1549 9157 0.976355483 2.379305518 0.189971464 0.365069357 0.589482267 1586 49 9 2395 3R:23291182-23291425 6 893 3495 FBgn0003118 3507.63 110.36 169.3033333 0.254587856 8.091699891 5.274556516 7 7 7 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 23605903 23605908 - 3R_23605903_23605908_- 0.999999132 0.999999471 0.999999301 2.83E-07 CG31145 FBtr0290056|FBtr0336459 23605749|23605749 23606850|23606850 3R - 23605824 23605930 3'utr CG31145 FlyBase G53713.1 ATTATTGTAACGTTTTTCAATTGTACCTTGAGTGGTTGAGATAGAGATCATTGATTGGCCAAGAAAAGAAAAAGTGACAGGTGAATTGAGTGTGAAAACTATGAGAA 123 23605909 0.824246802 19 117 1115 0.953642384 2.158362492 0.21192053 0.195121951 0.344370861 123 7 0 144 3R:23605824-23605930 6 CG31145 FBtr0336459|FBtr0290056 23605749|23605749 23606850|23606850 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 23605873 23605925 3'utr CG31145 FlyBase G40604.1 TGTAACGTTTTTCAATTGTACCTTGAGTGGTTGAGATAGAGATCATTGATTGG 61 23605909 0.792026983 6 58 586 0.947916667 1.959041392 0.239583333 0.409836066 0.625 61 5 0 91 3R:23605873-23605925 6 81 3496 FBgn0051145 14.00333333 0.44 0.683333333 5.784337063 184.0909091 118.5365854 1 1 1 0.1 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 23606086 23606093 - 3R_23606086_23606093_- 0.625364001 0.625364002 0.625364002 0 CG31145 FBtr0290056|FBtr0336459 23605749|23605749 23606850|23606850 3R - 23606057 23606154 3'utr CG31145 FlyBase G53715.1 AAGAAAAGTTGTTGCAAGTTTAGTTCGTAAGTTGACCTAACATTATGATCGATATCAGGCGTAGCTTTATCCGATTCAAGGATCGTCTTATTAGTTAG 25 23606109 0.991081207 11 21 218 0.870967742 1.431363764 0.161290323 0.2 0.35483871 25 4 0 27 3R:23606057-23606154 8 CG31145 FBtr0336459|FBtr0290056 23605749|23605749 23606850|23606850 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R - 23606058 23606137 3'utr CG31145 FlyBase G40606.1 GTTTAGTTCGTAAGTTGACCTAACATTATGATCGATATCAGGCGTAGCTTTATCCGATTCAAGGATCGTCTTATTAGTTA 17 23606088 0.88962346 11 16 122 0.875 1.322219295 0.416666667 0.352941176 0.541666667 17 3 0 21 3R:23606058-23606137 8 10 3497 FBgn0051145 14.00333333 0.44 0.683333333 0.714115687 22.72727273 14.63414634 16 -5 5.5 0.1 dme-miR-190-5p 6mer3-8 ACATAT 3R 23606215 23606220 - 3R_23606215_23606220_- 0.999999951 0.999985741 0.999992846 1.01E-05 CG31145 FBtr0290056|FBtr0336459 23605749|23605749 23606850|23606850 3R - 23606200 23606240 3'utr CG31145 FlyBase G53716.1 GCATACATTTTATGACTTTTACATATACACTTTTGCATACA 20 23606222 0.722443994 6 18 196 0.888888889 1.380211242 0.037037037 0.25 0.444444444 20 3 0 24 3R:23606200-23606240 6 CG31145 FBtr0336459|FBtr0290056 23605749|23605749 23606850|23606850 ACATAT 6mer3-8 dme-miR-190-5p 3R - 23606206 23606234 3'utr CG31145 FlyBase G40607.1 ATTTTATGACTTTTACATATACACTTTTG 11 23606222 0.757130274 2 11 112 1 1.146128036 0 0.272727273 0.428571429 11 0 0 14 3R:23606206-23606234 6 15.5 3498 FBgn0051145 14.00333333 0.44 0.683333333 1.106879314 35.22727273 22.68292683 2 2 2 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 3R 23689038 23689043 - 3R_23689038_23689043_- 0.72462063 0.996953532 0.860787081 0.19256844 CG10254 FBtr0084476|FBtr0084477|FBtr0334770 23689005|23689005|23689005 23689528|23689528|23689528 3R - 23689028 23689117 3'utr CG10254 FlyBase G53728.1 ACCTAGCTTAGTTAGTCCATCCCACGTCCAATCAGCACCATGTACGTAATATTGTAAGCTAGCCAATGCGAGAAATGTGAATAAACTAGC 18 23689036 0.94616622 6 18 80 1 1.322219295 0.238095238 0.166666667 0.285714286 18 0 0 21 3R:23689028-23689117 6 CG10254 FBtr0334770|FBtr0084477|FBtr0084476 23689005|23689005|23689005 23689528|23689528|23689528 ATGTGA 6mer3-8 dme-miR-1003-3p 3R - 23689019 23689114 3'utr CG10254 FlyBase G40615.1 TAGCTTAGTTAGTCCATCCCACGTCCAATCAGCACCATGTACGTAATATTGTAAGCTAGCCAATGCGAGAAATGTGAATAAACTAGCAATTTTATT 10 23689039 0.975844865 7 8 57 0.785714286 1.041392685 0 0.3 0.5 10 3 0 11 3R:23689019-23689114 6 7.5 3499 FBgn0027512 468.9733333 11.51 17.61333333 0.015992381 0.651607298 0.425813777 -7 -4 -5.5 0.1 dme-miR-14-3p 6mer3-8 AAGACT 3R 23689465 23689470 - 3R_23689465_23689470_- 0.676058559 0.697788945 0.686923752 0.015365642 CG10254 FBtr0084476|FBtr0084477|FBtr0334770 23689005|23689005|23689005 23689528|23689528|23689528 3R - 23689358 23689528 3'utr CG10254 FlyBase G53730.2 TTGCCACTCATCCTGGCCAGCGTATGCCTATGAAAATGGTGCCTATCAGAAGAACCACAAGACTTTTGCCGCCTGCGTTTTGGGAGTCTGATCTGGCCCTCGGCAAGTGTCAGCGTTTTATAGCCCCTATCTCGAATCTCGAATTTCTATCCGCTCGTATTGCTGGCAGAC 122 23689463 0.967300405 16 114 619 0.955223881 2.10720997 0.134328358 0.098360656 0.179104478 122 6 0 128 3R:23689358-23689528 6 CG10254 FBtr0334770|FBtr0084477|FBtr0084476 23689005|23689005|23689005 23689528|23689528|23689528 AAGACT 6mer3-8 dme-miR-14-3p 3R - 23689442 23689499 3'utr CG10254 FlyBase G40617.2 ATGAAAATGGTGCCTATCAGAAGAACCACAAGACTTTTGCCGCCTGCGTTTTGGGAGT 73 23689463 0.983629668 4 69 270 1 2.004321374 0.079207921 0.287671233 0.485148515 73 0 0 101 3R:23689442-23689499 6 75 3500 FBgn0027512 468.9733333 11.51 17.61333333 0.159923805 6.51607298 4.258137774 -7 -7 -7 0.1 dme-miR-318-3p 8mer-A1 CCCAGTGA 3R 23712878 23712885 - 3R_23712878_23712885_- 0.678004451 0.678003234 0.678003843 9.19E-07 nau FBtr0301445|FBtr0084472 23712812|23712812 23712945|23712945 3R - 23712822 23712919 3'utr nau FlyBase G53743.1 TTGTAAAGCTATTTTTAAGAGGATACACGAGATACCCAGTGACCCGAATAGGCCTTAAATTATTTGTATAGCATTAGAACTTAATTAAATGGTAATTC 48 23712880 0.948735073 10 48 213 1 1.73239376 0.37037037 0.083333333 0.185185185 48 0 0 54 3R:23712822-23712919 8 nau FBtr0301445|FBtr0084472 23712812|23712812 23712945|23712945 CCCAGTGA 8mer-A1 dme-miR-318-3p 3R - 23712859 23712903 3'utr nau FlyBase G40621.1 AAGAGGATACACGAGATACCCAGTGACCCGAATAGGCCTTAAATT 30 23712880 0.958694621 3 30 94 1 1.62324929 0.547619048 0.333333333 0.523809524 30 0 0 42 3R:23712859-23712903 8 35 3501 FBgn0002922 0 0 0 Inf Inf Inf -5 -5 -5 0.1 dme-miR-965-3p 7mer-m8 TACGCTT 3R 23751032 23751038 - 3R_23751032_23751038_- 0.620059128 0.613813718 0.616936423 0.004416165 RanBP3 FBtr0084468|FBtr0335003 23750935|23750935 23751241|23751241 3R - 23751016 23751096 3'utr RanBP3 FlyBase G53777.1 TAAATGAAGTGCTGATTTGTAAACCCGTGAGCAGCGTCGACAAAAGACATTTATCCATTACGCTTTGTGTTTATAATTTTT 43 23751039 0.816579694 9 42 443 0.97826087 1.653212514 0.130434783 0.069767442 0.130434783 43 1 0 45 3R:23751016-23751096 7 RanBP3 FBtr0084468|FBtr0335003 23750935|23750935 23751241|23751241 TACGCTT 7mer-m8 dme-miR-965-3p 3R - 23751010 23751053 3'utr RanBP3 FlyBase G40651.1 AAGACATTTATCCATTACGCTTTGTGTTTATAATTTTTTGTTAA 31 23751039 0.806933956 6 30 375 0.975609756 1.602059991 0.048780488 0.258064516 0.43902439 31 1 0 40 3R:23751010-23751053 7 33 3502 FBgn0039110 582.3333333 40.28333333 61.80666667 0.056668575 0.819197352 0.533922986 1 1 1 0.1 dme-miR-2535b-3p 6mer3-8 CCGTGA 3R 23751153 23751158 - 3R_23751153_23751158_- 0.782242693 0.941128812 0.861685752 0.112349439 RanBP3 FBtr0084468|FBtr0335003 23750935|23750935 23751241|23751241 3R - 23751130 23751169 3'utr RanBP3 FlyBase G53778.1 AATAAAGCGCGCCGTGAATTATTATAAATTAATTATAATA 18 23751151 0.699861215 3 18 104 1 1.301029996 0 0.111111111 0.2 18 0 0 20 3R:23751130-23751169 6 RanBP3 FBtr0084468|FBtr0335003 23750935|23750935 23751241|23751241 CCGTGA 6mer3-8 dme-miR-2535b-3p 3R - 23751127 23751170 3'utr RanBP3 FlyBase G40653.1 TAATAAAGCGCGCCGTGAATTATTATAAATTAATTATAATAATT 11 23751151 0.965914021 3 11 66 1 1.146128036 0 0.272727273 0.428571429 11 0 0 14 3R:23751127-23751170 6 14 3503 FBgn0039110 582.3333333 40.28333333 61.80666667 0.024041214 0.347538271 0.226512782 -7 -7 -7 0.1 dme-miR-277-3p 6mer3-8 TGCATT 3R 23766619 23766624 - 3R_23766619_23766624_- 0.769385051 0.990624546 0.880004798 0.15643988 CG10214 FBtr0084463 23766517 23766762 3R - 23766606 23766658 3'utr CG10214 FlyBase G53807.1 TTAAGCGTGAAGTTAGGCTTATATTATTGACAAATGCATTATGTTAAAAATAG 7 23766621 0.772515822 4 7 58 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 3R:23766606-23766658 6 CG10214 FBtr0084463 23766517 23766762 TGCATT 6mer3-8 dme-miR-277-3p 3R - 23766605 23766647 3'utr CG10214 FlyBase G40674.1 GTTAGGCTTATATTATTGACAAATGCATTATGTTAAAAATAGA 6 23766620 0.975642283 3 6 51 1 1 0.2 0.5 0.7 6 0 0 10 3R:23766605-23766647 6 5 3504 FBgn0039115 91.23333333 11.91333333 18.33 0.054804531 0.419697818 0.272776869 -3 -4 -3.5 0.1 dme-miR-263a-5p 6mer3-8 GTGCCA 3R 23800840 23800845 + 3R_23800840_23800845_+ 0.999824977 1 0.999912488 0.000123744 mbc FBtr0304729|FBtr0084459 23800770|23800770 23801634|23801634 3R + 23800757 23800851 stop_codon mbc FlyBase G45059.1 AAACACATTCCATAGGGTAGCGAGGGGCATCTTTGAACCCCAGAAGCTTCAGTGCAGCGCCATATATGTTCAAACGTTGTCGAGTGCCAAATATT 16 23800841 0.90357433 8 15 67 0.944444444 1.230448921 0.222222222 0.125 0.222222222 16 1 0 17 3R:23800757-23800851 6 mbc FBtr0304729|FBtr0084459 23800770|23800770 23801634|23801634 GTGCCA 6mer3-8 dme-miR-263a-5p 3R + 23800790 23800857 3'utr mbc FlyBase G34027.1 TGAACCCCAGAAGCTTCAGTGCAGCGCCATATATGTTCAAACGTTGTCGAGTGCCAAATATTCCTGTT 10 23800841 0.974542709 5 9 63 0.9375 1.176091259 0.125 0.5 0.6875 10 1 0 15 3R:23800790-23800857 6 6 3505 FBgn0015513 1872.666667 30.72333333 47.18666667 0.003203987 0.19529131 0.127154563 -1 -1 -1 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 3R 23801962 23801968 - 3R_23801962_23801968_- 0.586935541 0.597575172 0.592255356 0.007523404 CG33111 FBtr0334893|FBtr0334892 23801712|23801712 23806477|23802226 3R - 23801905 23802038 3'utr CG33111 FlyBase G53860.1 TCACGCCCACTCTCTTACACCTTGGTCTCAAATCTCAGGACCCTGCTGTCCCTGAACAACGAACATTCCGTGCATTTTCAAACCGTATTATTGTGTGCCTTTTCAAGGATGAAACTGAAGCCATTTTAAAATTT 177 23801973 0.980097687 14 174 1219 0.990147783 2.002166062 0.054187192 0.141242938 0.251231527 177 1 1 201 3R:23801905-23802038 7 CG33111 FBtr0334893|FBtr0084530|FBtr0084529|FBtr0334892|FBtr0100312 23801712|23801712|23801712|23801712|23801712 23806477|23802056|23802056|23802226|23802056 TGCATTT 7mer-m8 dme-miR-277-3p 3R - 23801917 23802036 3'utr CG33111 FlyBase G40705.1 ACGCCCACTCTCTTACACCTTGGTCTCAAATCTCAGGACCCTGCTGTCCCTGAACAACGAACATTCCGTGCATTTTCAAACCGTATTATTGTGTGCCTTTTCAAGGATGAAACTGAAGCC 108 23801973 0.96128777 11 106 715 0.987341772 2.193124598 0.063291139 0.296296296 0.518987342 108 2 0 156 3R:23801917-23802036 7 94 3506 FBgn0053111 182.5533333 9.853333333 15.05 0.514918015 9.539918809 6.245847176 5 5 5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 23809228 23809234 - 3R_23809228_23809234_- 0.823349288 0.823349391 0.82334934 7.07E-08 eIF4G2 FBtr0344335 23808283 23810293 3R - 23809202 23809282 5'utr eIF4G2 FlyBase G53863.1 AAAATTCGTAAAGACATGTAAAGTATTTAGCACACAAAGCATGATTATCCAAAGATAAATCTTAAAATTAGCTGTAAAAAG 47 23809238 0.694930987 13 42 273 0.890909091 1.69019608 0.036363636 0.14893617 0.272727273 47 6 0 49 3R:23809202-23809282 7 eIF4G2 FBtr0344335 23808283 23810293 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 23809207 23809270 5'utr eIF4G2 FlyBase G40707.1 GACATGTAAAGTATTTAGCACACAAAGCATGATTATCCAAAGATAAATCTTAAAATTAGCTGTA 23 23809238 0.982911985 8 18 143 0.84375 1.431363764 0.03125 0.304347826 0.5 23 5 0 27 3R:23809207-23809270 7 26 3507 FBgn0260634 1847.216667 30.65 47.06666667 0.01407523 0.848287113 0.552407932 4 4 4 0.1 dme-miR-305-5p 8mer-A1 AGTACAAA 3R 23809542 23809549 - 3R_23809542_23809549_- 0.605653874 0.605653884 0.605653879 0 eIF4G2 FBtr0344335 23808283 23810293 3R - 23809465 23809594 5'utr eIF4G2 FlyBase G53865.1 ATACTTTTCTAGACTTTAAACAGAATTTTGTTTATTTTACCTTTCAGTACAAAGCATTATGAACTTCGTTTTGTTTGATTTTTTATAAAGAACTACCAACATTGATTTACCTATTTTCTATGCGAATGGC 83 23809551 0.987385384 12 80 715 0.970588235 1.694605199 0.029411765 0.192771084 0.343137255 83 2 1 99 3R:23809465-23809594 8 eIF4G2 FBtr0344335 23808283 23810293 AGTACAAA 8mer-A1 dme-miR-305-5p 3R - 23809518 23809592 5'utr eIF4G2 FlyBase G40709.1 ACTTTTCTAGACTTTAAACAGAATTTTGTTTATTTTACCTTTCAGTACAAAGCATTATGAACTTCGTTTTGTTTG 44 23809552 0.988108518 8 40 370 0.918032787 1.447158031 0.016393443 0.295454545 0.491803279 44 4 1 56 3R:23809518-23809592 8 57.5 3508 FBgn0260634 1847.216667 30.65 47.06666667 0.031127913 1.876019576 1.221671388 2 3 2.5 0.1 dme-miR-190-5p 6mer3-8 ACATAT 3R 23809684 23809689 - 3R_23809684_23809689_- 0.999999941 0.999992288 0.999996115 5.37E-06 eIF4G2 FBtr0344335 23808283 23810293 3R - 23809634 23809802 5'utr eIF4G2 FlyBase G53866.1 GCAAAACTATGTAAAACTGAACCTACGATGCCGAAAAATATTTTGAAGAAATCAAATTCTGACAATGCCTTACCCAATGTGAACTGGGTATAGAAATATATTTATGTATATTTACATATGGACTATTAATTTTTGTAAACTCACAGTATTTCGTTAAACATTAAAATTA 126 23809684 0.919760887 28 119 1100 0.947712418 1.684246748 0.104575163 0.174603175 0.320261438 126 6 2 145 3R:23809634-23809802 6 eIF4G2 FBtr0344335 23808283 23810293 ACATAT 6mer3-8 dme-miR-190-5p 3R - 23809635 23809708 5'utr eIF4G2 FlyBase G40710.1 AATATATTTATGTATATTTACATATGGACTATTAATTTTTGTAAACTCACAGTATTTCGTTAAACATTAAAATT 54 23809684 0.83319595 10 51 541 0.93902439 1.58546073 0.048780488 0.462962963 0.646341463 54 4 1 77 3R:23809635-23809708 6 57.5 3509 FBgn0260634 1847.216667 30.65 47.06666667 0.031127913 1.876019576 1.221671388 -5 -5 -5 0.1 dme-miR-252-5p 6mer3-8 GTACTT 3R 23926479 23926484 - 3R_23926479_23926484_- 0.999999722 0.999999994 0.999999858 2.12E-07 CG13601 FBtr0084522|FBtr0330369 23926370|23926370 23926628|23926562 3R - 23926478 23926590 stop_codon CG13601 FlyBase G53920.1 GATGGCAGTGGCGATGGAGGAACAGTAAGGCCGCCCGCTTGTACACATTCAACCTGCAGACCATTTCATCAGTGCTAGTTATGATCAAATCGCGTGTTACCATTTCGTACTTT 16 23926495 0.948123452 10 15 96 0.95 0.977723605 0.2 0.125 0.3 16 0 1 19 3R:23926478-23926590 6 CG13601 FBtr0330369|FBtr0084522 23926370|23926370 23926562|23926628 GTACTT 6mer3-8 dme-miR-252-5p 3R - 23926473 23926533 3'utr CG13601 FlyBase G40741.1 AGACCATTTCATCAGTGCTAGTTATGATCAAATCGCGTGTTACCATTTCGTACTTTAAGTA 12 23926509 0.718262507 7 11 91 0.947368421 1.255272505 0.052631579 0.5 0.684210526 12 1 0 18 3R:23926473-23926533 6 3 3510 FBgn0039126 158.33 17.96666667 27.49333333 0.018947767 0.166975881 0.109117362 11 25 18 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 3R 23936062 23936068 - 3R_23936062_23936068_- 0.620202405 0.620185484 0.620193945 1.20E-05 Gdh FBtr0089497|FBtr0335205|FBtr0089498|FBtr0089496 23935956|23935956|23935956|23935956 23936373|23936373|23936373|23936373 3R - 23935999 23936144 3'utr Gdh FlyBase G53934.1 AAGTTGAACAAGTTGCGAGCTTATTATTGTTGATTTTCTGTAATTTTTAAGTTAATGAGCGTCAAAGTGAAGCAATTGCATTTTCAATTATGTATCGCAACGTCTCGTACCGTCAAGTCACGTTTATCGTACGATCGCTCCGTTGC 51 23936069 0.989068525 16 47 447 0.935483871 1.286306739 0.403225806 0.156862745 0.306451613 51 2 2 58 3R:23935999-23936144 7 Gdh FBtr0089498|FBtr0089496|FBtr0089497|FBtr0335205 23935956|23935956|23935956|23935956 23936373|23936373|23936373|23936373 TGCATTT 7mer-m8 dme-miR-277-3p 3R - 23936035 23936091 3'utr Gdh FlyBase G40748.1 AATGAGCGTCAAAGTGAAGCAATTGCATTTTCAATTATGTATCGCAACGTCTCGTAC 14 23936069 0.987019837 3 11 103 0.714285714 0.875061263 0 0.428571429 0.619047619 14 5 1 15 3R:23936035-23936091 7 13 3511 FBgn0001098 137.9033333 7.62 11.54666667 0.094268932 1.706036745 1.125866051 1 1 1 0.1 dme-miR-1007-3p 7mer-A1 GAGCTTA 3R 23936122 23936128 - 3R_23936122_23936128_- 0.823336002 0.823349562 0.823342782 9.62E-06 Gdh FBtr0089497|FBtr0335205|FBtr0089498|FBtr0089496 23935956|23935956|23935956|23935956 23936373|23936373|23936373|23936373 3R - 23935999 23936144 3'utr Gdh FlyBase G53934.1 AAGTTGAACAAGTTGCGAGCTTATTATTGTTGATTTTCTGTAATTTTTAAGTTAATGAGCGTCAAAGTGAAGCAATTGCATTTTCAATTATGTATCGCAACGTCTCGTACCGTCAAGTCACGTTTATCGTACGATCGCTCCGTTGC 51 23936118 0.989068525 16 47 447 0.935483871 1.286306739 0.403225806 0.156862745 0.306451613 51 2 2 58 3R:23935999-23936144 7 Gdh FBtr0089498|FBtr0089496|FBtr0089497|FBtr0335205 23935956|23935956|23935956|23935956 23936373|23936373|23936373|23936373 GAGCTTA 7mer-A1 dme-miR-1007-3p 3R - 23936107 23936172 3'utr Gdh FlyBase G40749.1 AAGCGAACTTTCGCCCGTGTTTCGTATTAAGTTGAACAAGTTGCGAGCTTATTATTGTTGATTTTC 17 23936118 0.811802963 5 16 152 0.903225806 1.447158031 0.322580645 0.529411765 0.741935484 17 3 0 28 3R:23936107-23936172 7 17 3512 FBgn0001098 137.9033333 7.62 11.54666667 0.123274758 2.230971129 1.472286374 -10 -10 -10 0.1 dme-miR-999-3p 6mer3-8 AGTTAA 3R 23936329 23936334 - 3R_23936329_23936334_- 0.999999979 0.999999994 0.999999986 0 Gdh FBtr0089497|FBtr0335205|FBtr0089498|FBtr0089496 23935956|23935956|23935956|23935956 23936373|23936373|23936373|23936373 3R - 23936267 23936449 stop_codon Gdh FlyBase G53936.1 CCTCAGAACCGCTGCCTACGTCAACTCCATTGAGAAGATCTTCACCACATACCGCGATGCCGGCCTGGCCTTCTAAGCCCGCTGAGTGTGCTGATTAGCCCCCAGACTCTTAACTAGTTAATTAAGCAATCGAACTCAAGAGCATAACTATTGCTATTGCTCCATGCACCGCCGTCTTAGATG 63 23936339 0.956534762 19 63 321 1 1.86332286 0.123287671 0.126984127 0.246575342 63 0 0 73 3R:23936267-23936449 6 Gdh FBtr0089498|FBtr0089496|FBtr0089497|FBtr0335205 23935956|23935956|23935956|23935956 23936373|23936373|23936373|23936373 AGTTAA 6mer3-8 dme-miR-999-3p 3R - 23936310 23936410 stop_codon Gdh FlyBase G40751.1 CTTCACCACATACCGCGATGCCGGCCTGGCCTTCTAAGCCCGCTGAGTGTGCTGATTAGCCCCCAGACTCTTAACTAGTTAATTAAGCAATCGAACTCAAG 29 23936356 0.969188146 12 26 144 0.960784314 1.69019608 0.117647059 0.482758621 0.705882353 29 2 0 49 3R:23936310-23936410 6 15.5 3513 FBgn0001098 137.9033333 7.62 11.54666667 0.112397573 2.034120735 1.342378753 5 22 13.5 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3R 23961085 23961091 + 3R_23961085_23961091_+ 0.521222321 0.521223854 0.521223088 1.13E-06 AP-1sigma FBtr0305039 23960941 23961504 3R + 23961048 23961166 5'utr AP-1sigma FlyBase G45096.1 TTTACAGCACTGCTCCATCCACTCCTCAACACTAGTGTGTGATTTGGCTGTTGTACAGCACTGAAGCGCTGAAAAAAAAATTATAAGCAAGAAGACGCCAAGCAGCGTGAGGCTCCAAA 23 23961091 0.999506114 8 22 171 0.961538462 1.096910013 0.230769231 0.086956522 0.192307692 23 0 1 25 3R:23961048-23961166 7 AP-1sigma FBtr0305040|FBtr0305039 23960941|23960941 23961118|23961504 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 23961064 23961110 5'utr AP-1sigma FlyBase G34061.1 ATCCACTCCTCAACACTAGTGTGTGATTTGGCTGTTGTACAGCACTG 15 23961091 0.699287916 4 14 144 0.904761905 0.801632346 0.523809524 0.4 0.571428571 15 0 2 19 3R:23961064-23961110 7 14.5 3514 FBgn0039132 832.4666667 93.19333333 142.7733333 0.017418115 0.155590529 0.101559582 -6 -6 -6 0.1 dme-miR-79-3p 7mer-A1 AGCTTTA 3R 23961445 23961451 + 3R_23961445_23961451_+ 0.823349378 0.82334403 0.823346704 3.82E-06 AP-1sigma FBtr0305039 23960941 23961504 3R + 23961369 23961464 3'utr AP-1sigma FlyBase G45097.1 AATCAATCACCAAATGGGCAATAACTAATTTAGTGGGGAAATATATGCAATACTATTCTTACAATAGAAACATGTAAGCTTTAATGTTGATTAAAT 23 23961443 0.986945063 6 22 158 0.962962963 1.414973348 0.259259259 0.173913043 0.296296296 23 1 0 26 3R:23961369-23961464 7 AP-1sigma FBtr0305039 23960941 23961504 AGCTTTA 7mer-A1 dme-miR-79-3p 3R + 23961430 23961464 3'utr AP-1sigma FlyBase G34062.2 CAATAGAAACATGTAAGCTTTAATGTTGATTAAAT 20 23961443 0.792994006 5 19 137 0.933333333 1.447158031 0.433333333 0.5 0.666666667 20 2 0 28 3R:23961430-23961464 7 18 3515 FBgn0039132 832.4666667 93.19333333 142.7733333 0.021622487 0.193146863 0.126073963 2 2 2 0.1 dme-miR-283-5p 6mer3-8 TGATAT 3R 23985283 23985288 - 3R_23985283_23985288_- 0.999973194 0.999998424 0.999985809 1.78E-05 CG13603 FBtr0084510 23985211 23985472 3R - 23985262 23985402 3'utr CG13603 FlyBase G53976.1 TTGTATGTCATTTCGTCCTCGTCCTTATCATTGAGGCAGACAACCGGCAACACACATTATCTTTGTAGTGAAGGAAACTAGAGATATTAGCCCTATGTATTAAGCCAACATACGTGATATGTAATGTATATATATATATAT 243 23985292 0.9453854 18 232 1175 0.956140351 1.815577748 0.023391813 0.271604938 0.48245614 243 11 4 327 3R:23985262-23985402 6 CG13603 FBtr0084510 23985211 23985472 TGATAT 6mer3-8 dme-miR-283-5p 3R - 23985268 23985321 3'utr CG13603 FlyBase G40779.1 AGATATTAGCCCTATGTATTAAGCCAACATACGTGATATGTAATGTATATATAT 167 23985292 0.889342987 12 161 764 0.960854093 2.431363764 0.039145907 0.431137725 0.661921708 167 11 0 270 3R:23985268-23985321 6 194.5 3516 FBgn0039135 277 32.77 49.89333333 0.702166065 5.935306683 3.898316408 4 4 4 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 23985459 23985464 - 3R_23985459_23985464_- 0.999999557 0.999999021 0.999999289 4.24E-07 CG13603 FBtr0084510|FBtr0084510|FBtr0084510 23985211|23985211|23985211 23985472|23985472|23985472 3R - 23985404 23985481 stop_codon CG13603 FlyBase G53977.1 AACAAATAGTTGACGTTTGTGATCAATCAGCAGCAGTTTGTAATTCTCTACGTATTTCTCATCATGTGCGTTATAATC 62 23985465 0.984361879 11 57 454 0.9 1.857332496 0.1375 0.225806452 0.4 62 8 0 72 3R:23985404-23985481 6 CG13603 FBtr0084510|FBtr0084510|FBtr0084510 23985211|23985211|23985211 23985472|23985472|23985472 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 23985354 23985483 stop_codon CG13603 FlyBase G40780.1 AGAACAAATAGTTGACGTTTGTGATCAATCAGCAGCAGTTTGTAATTCTCTACGTATTTCTCATCATGTGCGTTATAATCATTGTATGTCATTTCGTCCTCGTCCTTATCATTGAGGCAGACAACCGGCA 44 23985465 0.98365467 15 42 329 0.941176471 1.204119983 0.044117647 0.477272727 0.661764706 44 1 3 64 3R:23985354-23985483 6 41.5 3517 FBgn0039135 277 32.77 49.89333333 0.149819495 1.266402197 0.831774452 1 1 1 0.1 dme-miR-79-3p 7mer-m8 TAGCTTT 3R 23988236 23988242 + 3R_23988236_23988242_+ 0.620202811 0.620075319 0.620139065 9.02E-05 CG5902 FBtr0301165|FBtr0084501|FBtr0084502 23988158|23988158|23988158 23988738|23988738|23988738 3R + 23988152 23988271 stop_codon CG5902 FlyBase G45110.1 AGTGCTAACAATTGGACAGGACGGCGGCGAGGCGATGATCCTGGCTTAGGGCAGGCCTGATGGCCGTCGTCCTCCTGCTGCTGCTAGCTTTTGAGTTTGGCCCAGCTTGGCGGCCGCTCG 14 23988243 0.979138223 10 14 90 1 1.204119983 0.5 0.071428571 0.1875 14 0 0 16 3R:23988152-23988271 7 CG5902 FBtr0084502|FBtr0301165|FBtr0084501 23988158|23988158|23988158 23988738|23988738|23988738 TAGCTTT 7mer-m8 dme-miR-79-3p 3R + 23988213 23988268 3'utr CG5902 FlyBase G34072.1 GGCCGTCGTCCTCCTGCTGCTGCTAGCTTTTGAGTTTGGCCCAGCTTGGCGGCCGC 7 23988245 0.97353819 5 7 46 1 0.903089987 0.375 0.142857143 0.25 7 0 0 8 3R:23988213-23988268 7 5 3518 FBgn0039136 356.6666667 25.57 39.43333333 0.014018692 0.19554165 0.126796281 -7 -9 -8 0.1 dme-miR-14-3p 7mer-A1 AGACTGA 3R 23989430 23989436 - 3R_23989430_23989436_- 0.823348123 0.823348142 0.823348132 0 CG13604 FBtr0113275|FBtr0113276|FBtr0113277|FBtr0084509 23988804|23988804|23988804|23988804 23989471|23989471|23989471|23989471 3R - 23989408 23989452 3'utr CG13604 FlyBase G53982.1 TTCTCTGCAAGCATTGAGACTGAGACTCAACTCGATTGGGACGGA 26 23989438 0.81861698 2 25 128 0.965517241 1.447158031 0.172413793 0.076923077 0.172413793 26 1 0 28 3R:23989408-23989452 7 CG13604 FBtr0084509|FBtr0113277|FBtr0113276|FBtr0113275 23988804|23988804|23988804|23988804 23989471|23989471|23989471|23989471 AGACTGA 7mer-A1 dme-miR-14-3p 3R - 23989392 23989450 3'utr CG13604 FlyBase G40782.1 CTCTGCAAGCATTGAGACTGAGACTCAACTCGATTGGGACGGACCTGGAGGTGAATCAC 11 23989438 0.959921769 2 11 54 1 1.278753601 0.105263158 0.545454545 0.736842105 11 0 0 19 3R:23989392-23989450 7 17.5 3519 FBgn0039137 117.6666667 5.27 8.02 0.148725212 3.320683112 2.182044888 2 2 2 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3R 23995213 23995219 + 3R_23995213_23995219_+ 0.521223855 0.521223855 0.521223855 0 Rab7 FBtr0308612|FBtr0084503|FBtr0308611 23994749|23994749|23994749 23995252|23995452|23995252 3R + 23995150 23995241 3'utr Rab7 FlyBase G45117.1 TGCAACAGAACAGCAACATTGAGAATACAACATCAGAGTATCTTCTAAACAAACAAAAAATCTTGTGATTGTAAATTTAATAAAAGAATAAC 337 23995212 0.988788597 12 310 2912 0.923273657 1.235287907 0.046035806 0.139465875 0.25831202 337 10 20 361 3R:23995150-23995241 7 Rab7 FBtr0308612|FBtr0084503|FBtr0308611 23994749|23994749|23994749 23995252|23995452|23995252 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 23995178 23995245 3'utr Rab7 FlyBase G34078.1 AACATCAGAGTATCTTCTAAACAAACAAAAAATCTTGTGATTGTAAATTTAATAAAAGAATAACTTTT 241 23995219 0.637495373 10 223 2106 0.928571429 1.348026558 0.041666667 0.290456432 0.491071429 241 11 13 312 3R:23995178-23995245 7 281 3520 FBgn0015795 908.47 85 130.1166667 0.30931126 3.305882353 2.159600359 1 -6 -2.5 0.1 dme-bantam-3p 8mer-A1 TGATCTCA 3R 23998101 23998108 - 3R_23998101_23998108_- 0.631135933 0.631136239 0.631136086 2.12E-07 KrT95D FBtr0084507|FBtr0084508 23997536|23997536 23998637|23998637 3R - 23998055 23998135 3'utr KrT95D FlyBase G53986.1 CCAAGCAATCGGGAGCATTAGGCCCCATGATCTCAAAATCGCCGCTCCCGTTTGGCCAACTATCAAATGAACCTAAAAGTA 92 23998108 0.952704995 10 89 399 0.972477064 1.72427587 0.018348624 0.173913043 0.302752294 92 2 1 106 3R:23998055-23998135 8 KrT95D FBtr0084507|FBtr0084508 23997536|23997536 23998637|23998637 TGATCTCA 8mer-A1 dme-bantam-3p 3R - 23998080 23998133 3'utr KrT95D FlyBase G40785.1 AAGCAATCGGGAGCATTAGGCCCCATGATCTCAAAATCGCCGCTCCCGTTTGGC 63 23998108 0.838644418 5 59 271 0.93814433 1.959041392 0.051546392 0.365079365 0.587628866 63 6 0 91 3R:23998080-23998133 8 73 3521 FBgn0020647 1157.06 25.70333333 39.3 0.063090937 2.84009856 1.857506361 0 0 0 0.1 dme-miR-184-5p 7mer-m8 TGATAAG 3R 24034590 24034596 - 3R_24034590_24034596_- 0.658965217 0.658999343 0.65898228 2.41E-05 Miro FBtr0084596|FBtr0084595|FBtr0303849|FBtr0321262 24034360|24034360|24034360|24034360 24034893|24034893|24034893|24034893 3R - 24034590 24034657 3'utr Miro FlyBase G54009.1 GAGCACATTGTGTACGCTGCATTTCTAATCGTATATTAACTTACATAAACCATGTTCTCTCTGATAAG 24 24034605 0.75765264 9 21 172 0.90625 1.462397998 0.125 0.291666667 0.46875 24 3 0 29 3R:24034590-24034657 6 Miro FBtr0084596|FBtr0084595|FBtr0303849|FBtr0321262 24034360|24034360|24034360|24034360 24034893|24034893|24034893|24034893 TGATAAG 7mer-m8 dme-miR-184-5p 3R - 24034556 24034687 3'utr Miro FlyBase G40799.1 GCAGGAATTGGGCTGGAGCAGTGGCCAGTCGAGCACATTGTGTACGCTGCATTTCTAATCGTATATTAACTTACATAAACCATGTTCTCTCTGATAAGTCAAATAAGCTATTGTTACCAGCATATTCGAGTA 14 24034598 0.987621698 9 14 114 1 1.361727836 0.043478261 0.357142857 0.608695652 14 0 0 23 3R:24034556-24034687 7 11.5 3522 FBgn0039140 543 24.22 36.88333333 0.021178637 0.474814203 0.311793945 9 2 5.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 24042416 24042421 + 3R_24042416_24042421_+ 0.9999943 0.999999131 0.999996715 3.39E-06 spas FBtr0084533|FBtr0346099 24041623|24041623 24042654|24042982 3R + 24042365 24042445 3'utr spas FlyBase G45135.1 TACAATCGTCTCCGATTCACCTATATTATTAGTAACACACCCAAAAATGTTGTACCTAGCAGGTGCGTATGGATCTGGTGT 54 24042415 0.982767264 7 52 397 0.967213115 1.770852012 0.508196721 0.111111111 0.213114754 54 2 0 59 3R:24042365-24042445 6 spas FBtr0084533|FBtr0346099 24041623|24041623 24042654|24042982 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 24042394 24042442 3'utr spas FlyBase G34092.1 TAGTAACACACCCAAAAATGTTGTACCTAGCAGGTGCGTATGGATCTGG 41 24042415 0.711728743 6 33 257 0.793650794 1.397940009 0.507936508 0.341463415 0.571428571 41 12 1 50 3R:24042394-24042442 6 44 3523 FBgn0039141 308.9966667 10.26 15.68 0.142396358 4.288499025 2.806122449 1 1 1 0.1 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3R 24042549 24042554 + 3R_24042549_24042554_+ 0.644562466 0.819315321 0.731938893 0.12356889 spas FBtr0084533|FBtr0346099 24041623|24041623 24042654|24042982 3R + 24042505 24042570 3'utr spas FlyBase G45137.1 TTGAACCAGCTTCAACGCAGCTCGCCCACCCGGAATTTGAGTTCTTTGACTAGTTACTAAACACAG 11 24042541 0.973387977 6 10 62 0.923076923 1.079181246 0.461538462 0.181818182 0.307692308 11 1 0 12 3R:24042505-24042570 6 spas FBtr0084533|FBtr0346099 24041623|24041623 24042654|24042982 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3R + 24042517 24042554 3'utr spas FlyBase G34093.1 CAACGCAGCTCGCCCACCCGGAATTTGAGTTCTTTGAC 5 24042542 0.977658869 4 4 28 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:24042517-24042554 6 4 3524 FBgn0039141 308.9966667 10.26 15.68 0.012945123 0.389863548 0.255102041 8 7 7.5 0.1 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 24043528 24043533 - 3R_24043528_24043533_- 1 0.999999992 0.999999996 0 Rox8 FBtr0333201|FBtr0084594|FBtr0333202|FBtr0333200|FBtr0084592|FBtr0084591 24043054|24043054|24043054|24043054|24043054|24043054 24043963|24043963|24043963|24043963|24043963|24043963 3R - 24043511 24043633 3'utr Rox8 FlyBase G54026.1 AGTCGAACGTTAAGGCGGTGCGTGGAGCTCAACTTCAAGTGATCCACGCCGGCGACAACTGAAAGAACATCAATTGAAAAGCTCCGGGCGATGGGCGGGTAGCTGTAACAATCTAATCCAATC 28 24043542 0.924746377 11 26 94 0.967741935 1.477121255 0.064516129 0.107142857 0.193548387 28 1 0 30 3R:24043511-24043633 6 Rox8 FBtr0333202|FBtr0333200|FBtr0084592|FBtr0084591|FBtr0333201|FBtr0084594 24043054|24043054|24043054|24043054|24043054|24043054 24043963|24043963|24043963|24043963|24043963|24043963 AGCTGT 6mer3-8 dme-miR-1008-3p 3R - 24043500 24043560 3'utr Rox8 FlyBase G40812.1 TTGAAAAGCTCCGGGCGATGGGCGGGTAGCTGTAACAATCTAATCCAATCTAAGTACGTGT 10 24043542 0.941254379 5 9 39 0.823529412 1.146128036 0.117647059 0.5 0.705882353 10 3 0 14 3R:24043500-24043560 6 7.5 3525 FBgn0005649 2598.78 95.18666667 146.0933333 0.00288597 0.078792548 0.051337045 9 9 9 0.1 dme-miR-263a-5p 7mer-m1 TGCCATT 3R 24053535 24053541 + 3R_24053535_24053541_+ 0.765586432 0.765586582 0.765586507 1.41E-07 CG5991 FBtr0084538|FBtr0084536|FBtr0084537 24053389|24053389|24053389 24053592|24053592|24053592 3R + 24053391 24053558 3'utr CG5991 FlyBase G45154.1 AAATGGGAGCCACAATTATGTACCGAATCAGTGCAAAGTCCTGTCCCCCAACTGCTCAGATCACTTGTTGTATTAGCATTAGACGCTCGTGTCCTAGGCAAATGTATTTTGTGAACATCCTGCGAAGCTAACTCTGTGTATTGTTGCCATTTCAGTAGTTTTAAGCTA 354 24053531 0.965449348 30 335 2437 0.940047962 1.894316063 0.230215827 0.149717514 0.278177458 354 21 4 392 3R:24053391-24053558 7 CG5991 FBtr0084536|FBtr0084537|FBtr0084538 24053389|24053389|24053389 24053592|24053592|24053592 TGCCATT 7mer-m1 dme-miR-263a-5p 3R + 24053465 24053569 3'utr CG5991 FlyBase G34106.1 AGCATTAGACGCTCGTGTCCTAGGCAAATGTATTTTGTGAACATCCTGCGAAGCTAACTCTGTGTATTGTTGCCATTTCAGTAGTTTTAAGCTATATTTTATACA 174 24053532 0.669943802 16 169 1460 0.971530249 2.436162647 0.434163701 0.408045977 0.633451957 174 8 0 273 3R:24053465-24053569 7 131 3526 FBgn0026576 379.7933333 22.07666667 33.86 0.344924433 5.933866828 3.868871825 4 3 3.5 0.1 dme-bantam-3p 8mer-A1 TGATCTCA 3R 24055167 24055174 - 3R_24055167_24055174_- 0.631136126 0.631136177 0.631136151 7.07E-08 Hsp68 FBtr0084589 24055078 24055196 3R - 24055146 24055243 stop_codon Hsp68 FlyBase G54050.1 AGCAAGCTGGCGGTTATAAGGGTCCCACCGTCGAGGAGGTGGACTAATTCAAACGAAGTCCCCCTATATTGATCTCATAACCAAAAATACTCAAATAT 1368 24055175 0.876142772 14 1328 9596 0.971669681 1.952092532 0.177817963 0.159356725 0.306811332 1368 30 17 1612 3R:24055146-24055243 8 Hsp68 FBtr0084589 24055078 24055196 TGATCTCA 8mer-A1 dme-bantam-3p 3R - 24055105 24055193 3'utr Hsp68 FlyBase G40829.1 AAACGAAGTCCCCCTATATTGATCTCATAACCAAAAATACTCAAATATCTAAAAATATAGTTCCAATATGCTATTAAATAGTATTAATA 663 24055175 0.678258466 13 636 4675 0.962151394 1.984977126 0.156374502 0.34841629 0.569721116 663 29 9 966 3R:24055105-24055193 8 1005 3527 FBgn0001230 388.3333333 20.75333333 31.29666667 2.587982833 48.42595567 32.11204601 1 1 1 0.1 dme-miR-11-3p 7mer-m1 TGTGATG 3R 24067400 24067406 - 3R_24067400_24067406_- 0.535593563 0.535593563 0.535593563 0 4EHP FBtr0300475|FBtr0303159 24067364|24064475 24101797|24068001 3R - 24067385 24067426 3'utr 4EHP FlyBase G54063.1 TTAATTAGTAATTATTATAATGTGATGTTATATATATAAATC 35 24067410 0.651195498 9 33 393 0.973684211 1.568201724 0.052631579 0.085714286 0.157894737 35 1 0 37 3R:24067385-24067426 7 4EHP FBtr0300475|FBtr0303159 24067364|24064475 24101797|24068001 TGTGATG 7mer-m1 dme-miR-11-3p 3R - 24067384 24067426 3'utr 4EHP FlyBase G40836.1 TTAATTAGTAATTATTATAATGTGATGTTATATATATAAATCA 34 24067399 0.652942345 7 31 396 0.913043478 1.62324929 0 0.294117647 0.47826087 34 4 0 42 3R:24067384-24067426 7 34 3528 FBgn0053100 1050.1 50.24 77.18 0.032377869 0.676751592 0.440528634 4 -7 -1.5 0.1 dme-miR-2535b-3p 8mer-A1 CCGTGAGA 3R 24167711 24167718 - 3R_24167711_24167718_- 0.64181907 0.641821146 0.641820108 1.41E-06 CG5510 FBtr0084576 24167673 24167937 3R - 24167692 24167739 3'utr CG5510 FlyBase G54112.1 TGAACTATAGGAAAATTGAGACCGTGAGAATATTATTGCGTAGACAAG 18 24167723 0.760100224 6 17 89 0.958333333 1.361727836 0.125 0.333333333 0.5 18 1 0 23 3R:24167692-24167739 8 CG5510 FBtr0084576 24167673 24167937 CCGTGAGA 8mer-A1 dme-miR-2535b-3p 3R - 24167695 24167734 3'utr CG5510 FlyBase G40868.1 TATAGGAAAATTGAGACCGTGAGAATATTATTGCGTAGAC 6 24167715 0.937340613 3 5 32 0.857142857 0.77815125 0.142857143 0.166666667 0.285714286 6 1 0 6 3R:24167695-24167734 8 11.5 3529 FBgn0039160 449.3066667 40.31666667 61.58 0.025594991 0.285241835 0.186748944 5 -3 1 0.1 dme-miR-317-5p 8mer-A1 GTATCCCA 3R 24167839 24167846 - 3R_24167839_24167846_- 0.675373746 0.67520704 0.675290393 0.000117875 CG5510 FBtr0084576 24167673 24167937 3R - 24167823 24167948 stop_codon CG5510 FlyBase G54113.1 GTTTCTACTGAGCTCTCTAGCTAGTTCATCACAGTAGCATCATGTTAGGAGTTACCCGGACCTCAGTTGATCGCAACTTTTATTTATATTTATACCGCGACTGTATCCCATTTCTTATCACCCTTT 60 24167845 0.936914751 17 56 395 0.940298507 1.498310554 0.119402985 0.116666667 0.208955224 60 3 1 63 3R:24167823-24167948 8 CG5510 FBtr0084576 24167673 24167937 GTATCCCA 8mer-A1 dme-miR-317-5p 3R - 24167808 24167867 3'utr CG5510 FlyBase G40869.1 ATTTATATTTATACCGCGACTGTATCCCATTTCTTATCACCCTTTTTAGTTTCCTTAATT 15 24167845 0.982028415 6 15 118 1 1.380211242 0.041666667 0.4 0.625 15 0 0 24 3R:24167808-24167867 8 20 3530 FBgn0039160 449.3066667 40.31666667 61.58 0.044513027 0.496072757 0.324780773 -1 -1 -1 0.1 dme-miR-278-3p 6mer3-8 CCCACC 3R 24198008 24198013 - 3R_24198008_24198013_- 1 0.865032582 0.932516291 0.095436364 twin FBtr0084571|FBtr0084568|FBtr0084570|FBtr0084567|FBtr0084569|FBtr0084566 24197589|24196891|24197589|24197786|24197589|24197589 24198435|24198435|24198435|24198435|24198435|24198435 3R - 24197985 24198070 3'utr twin FlyBase G54135.1 CAGTTTAAGTTAGATACGACAAACTTTGATTTCTAATCCGGTCCCTCAGCTCTTGTACCCACCATCCCCCCAAGAACCCTAAGTTA 49 24198043 0.958011269 10 48 337 0.98245614 1.748188027 0.140350877 0.163265306 0.280701754 49 1 0 56 3R:24197985-24198070 6 twin FBtr0084569|FBtr0084566|FBtr0084571|FBtr0084568|FBtr0084570|FBtr0084567 24197589|24197589|24197589|24196891|24197589|24197786 24198435|24198435|24198435|24198435|24198435|24198435 CCCACC 6mer3-8 dme-miR-278-3p 3R - 24197934 24198069 3'utr twin FlyBase G40884.1 AGTTTAAGTTAGATACGACAAACTTTGATTTCTAATCCGGTCCCTCAGCTCTTGTACCCACCATCCCCCCAAGAACCCTAAGTTATAAGCTGACGACGTTGTGGAGGTCCCGCCGCTTTGTGCGCTGGATCGCAAA 34 24198043 0.982921359 13 31 231 0.86 1.633468456 0.24 0.294117647 0.52 34 7 0 43 3R:24197934-24198069 6 10 3531 FBgn0011725 325.5 12.29666667 18.56 0.030721966 0.813228517 0.538793103 30 30 30 0.1 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3R 24248459 24248464 + 3R_24248459_24248464_+ 0.999986732 0.999999395 0.999993064 8.98E-06 mask FBtr0345261|FBtr0084562|FBtr0334942|FBtr0305043|FBtr0334943|FBtr0084563 24248013|24248013|24248013|24248013|24248013|24248013 24250248|24250248|24250248|24250248|24250248|24248853 3R + 24248448 24248490 3'utr mask FlyBase G45299.1 ATGTTTGAAACTGGTGCCCAGGCAACTGGGTCCAATATATATT 15 24248462 0.860838539 3 14 61 0.9375 1.176091259 0.0625 0.066666667 0.125 15 1 0 15 3R:24248448-24248490 6 mask FBtr0334942|FBtr0305043|FBtr0334943|FBtr0084563|FBtr0345261|FBtr0084562 24248013|24248013|24248013|24248013|24248013|24248013 24250248|24250248|24250248|24248853|24250248|24250248 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3R + 24248446 24248493 3'utr mask FlyBase G34195.1 ACATGTTTGAAACTGGTGCCCAGGCAACTGGGTCCAATATATATTATT 8 24248462 0.971071257 4 7 40 1 1 0 0.428571429 0.6 7 0 0 10 3R:24248446-24248493 6 10.5 3532 FBgn0043884 5250.546667 44.06333333 67.82333333 0.001999792 0.238293366 0.154813977 -3 -3 -3 0.1 dme-miR-970-3p 8mer-A1 TCTTATGA 3R 24248707 24248714 + 3R_24248707_24248714_+ 0.630790218 0.630790218 0.630790218 0 mask FBtr0345261|FBtr0084562|FBtr0334942|FBtr0305043|FBtr0334943|FBtr0084563 24248013|24248013|24248013|24248013|24248013|24248013 24250248|24250248|24250248|24250248|24250248|24248853 3R + 24248650 24248724 3'utr mask FlyBase G45302.1 ACACAAACCCACACACCCGCATATACACAAATACATTTACGTTAGGATAAAAGTCAGTCTTATGAATGAAACATT 21 24248707 0.972439039 9 20 120 0.916666667 1.342422681 0.125 0.142857143 0.25 21 2 0 22 3R:24248650-24248724 8 mask FBtr0334942|FBtr0305043|FBtr0334943|FBtr0084563|FBtr0345261|FBtr0084562 24248013|24248013|24248013|24248013|24248013|24248013 24250248|24250248|24250248|24248853|24250248|24250248 TCTTATGA 8mer-A1 dme-miR-970-3p 3R + 24248660 24248754 3'utr mask FlyBase G34197.1 ACACACCCGCATATACACAAATACATTTACGTTAGGATAAAAGTCAGTCTTATGAATGAAACATTAAATTGAAATGTTTAGCGCCAGCTAAAGTT 17 24248714 0.981160097 8 15 110 0.913043478 1.322219295 0.043478261 0.235294118 0.434782609 17 2 0 21 3R:24248660-24248754 8 11 3533 FBgn0043884 5250.546667 44.06333333 67.82333333 0.00209502 0.249640669 0.162186072 0 -7 -3.5 0.1 dme-miR-7-5p 6mer3-8 GTCTTC 3R 24291813 24291818 + 3R_24291813_24291818_+ 0.999999992 0.999999988 0.99999999 0 CG6364 FBtr0084602|FBtr0309095|FBtr0309097|FBtr0309096 24291623|24291623|24291623|24291623 24292251|24292599|24293111|24293371 3R + 24291797 24291894 3'utr CG6364 FlyBase G45335.1 CATCGCTTCTCATTTGGTCTTCTCATCGTAACCGATTAACGTAGTCCTAAGATTGAAAAGTATCTTTAGTATCTACTCTTGCATATGTTCAACAATAC 16 24291811 0.790952198 11 16 141 1 1.230448921 0.176470588 0.0625 0.117647059 16 0 0 17 3R:24291797-24291894 6 CG6364 FBtr0309097|FBtr0309096|FBtr0084602|FBtr0309095 24291623|24291623|24291623|24291623 24293111|24293371|24292251|24292599 GTCTTC 6mer3-8 dme-miR-7-5p 3R + 24291799 24291845 3'utr CG6364 FlyBase G34222.1 TCGCTTCTCATTTGGTCTTCTCATCGTAACCGATTAACGTAGTCCTA 8 24291811 0.704601409 5 8 64 1 1.041392685 0.181818182 0.375 0.545454545 8 0 0 11 3R:24291799-24291845 6 7 3534 FBgn0263398 498.7566667 32.38666667 49.51666667 0.0140349 0.216138329 0.141366543 2 2 2 0.1 dme-miR-14-3p 6mer2-7 AGACTG 3R 24328194 24328199 + 3R_24328194_24328199_+ 0.981325591 0.890997738 0.936161665 0.063871471 BRWD3 FBtr0084604 24328188 24328619 3R + 24328167 24328266 stop_codon BRWD3 FlyBase G45363.1 CGCGCGGTATCTTCAAGGAGTGACCGCAGACTGTTTTATGTATAAATTAAATCTAATTGCTAAATCAACAAACCTTTGTAACATTTGCTAGAGTCTTATT 65 24328200 0.689092128 9 63 405 0.975308642 1.596597096 0.061728395 0.169230769 0.333333333 65 1 1 79 3R:24328167-24328266 6 BRWD3 FBtr0084604 24328188 24328619 AGACTG 6mer2-7 dme-miR-14-3p 3R + 24328165 24328248 stop_codon BRWD3 FlyBase G34237.1 GGCGCGCGGTATCTTCAAGGAGTGACCGCAGACTGTTTTATGTATAAATTAAATCTAATTGCTAAATCAACAAACCTTTGTAAC 37 24328200 0.972455649 10 37 219 1 1.72427587 0 0.324324324 0.528301887 37 0 0 53 3R:24328165-24328248 6 46.5 3535 FBgn0011785 875.23 14.49333333 22.14666667 0.053128892 3.208371665 2.099638772 -6 -6 -6 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3R 24328578 24328584 - 3R_24328578_24328584_- 0.521223854 0.521223827 0.52122384 7.07E-08 CG5728 FBtr0084632 24328453 24328688 3R - 24328514 24328593 3'utr CG5728 FlyBase G54186.1 TAAATGAAGTGTGATTCCGAGTGCTACCTTTAAATATATATGTATGATAGTACCTATATATTATAGAAATACATATAAAA 32 24328572 0.986496262 9 28 247 0.930232558 1.301029996 0.279069767 0.28125 0.465116279 32 2 1 40 3R:24328514-24328593 7 CG5728 FBtr0084632 24328453 24328688 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 24328536 24328641 3'utr CG5728 FlyBase G40919.1 AAGAGTTACATACAGTGTTTTTCATGATACTTTATTCTAAAACTATTTTAAATGAAGTGTGATTCCGAGTGCTACCTTTAAATATATATGTATGATAGTACCTATA 22 24328579 0.911690021 15 21 186 0.96969697 1.505149978 0.303030303 0.363636364 0.575757576 22 1 0 32 3R:24328536-24328641 7 19 3536 FBgn0039182 780.49 20.48333333 31.61333333 0.024343682 0.927583401 0.601012231 -12 -5 -8.5 0.1 dme-miR-14-3p 8mer-A1 AAGACTGA 3R 24344645 24344652 - 3R_24344645_24344652_- 0.643565469 0.643565448 0.643565459 7.07E-08 CG5746 FBtr0334603 24343893 24346710 3R - 24344606 24344746 3'utr CG5746 FlyBase G54200.1 ATGTATACAATGATTTTATTTGTTATTATTAAGCCGAACCTAAACTACAGTCTTAAAAAGTATAAACAAGATATGCAAATGAAAATTTATTAAAAAGACTGATACTTCACGAGATACAATCTCCATAGATCCAAAGAAACT 58 24344658 0.980591959 18 53 375 0.897058824 1.30820858 0.044117647 0.155172414 0.279411765 58 5 2 61 3R:24344606-24344746 8 CG5746 FBtr0334603 24343893 24346710 AAGACTGA 8mer-A1 dme-miR-14-3p 3R - 24344598 24344745 3'utr CG5746 FlyBase G40927.1 TGTATACAATGATTTTATTTGTTATTATTAAGCCGAACCTAAACTACAGTCTTAAAAAGTATAAACAAGATATGCAAATGAAAATTTATTAAAAAGACTGATACTTCACGAGATACAATCTCCATAGATCCAAAGAAACTAAATATAA 43 24344658 0.988572706 18 36 313 0.84375 1.033423755 0.109375 0.279069767 0.515625 43 6 4 54 3R:24344598-24344745 8 34.5 3537 FBgn0039186 880.5666667 39.34 60.32 0.039179316 0.876970005 0.571949602 6 6 6 0.1 dme-miR-980-5p 7mer-A1 AAAAACA 3R 24345211 24345217 - 3R_24345211_24345217_- 0.614644583 0.777442426 0.696043504 0.115115428 CG5746 FBtr0334603 24343893 24346710 3R - 24345203 24345243 3'utr CG5746 FlyBase G54202.1 ATTTTGGTAAGTTAAGGTTAATGCCAAAAAACATATATACA 13 24345222 0.910362096 2 13 69 1 1.176091259 0.133333333 0.153846154 0.266666667 13 0 0 15 3R:24345203-24345243 7 CG5746 FBtr0334603 24343893 24346710 AAAAACA 7mer-A1 dme-miR-980-5p 3R - 24345167 24345243 3'utr CG5746 FlyBase G40929.1 ATTTTGGTAAGTTAAGGTTAATGCCAAAAAACATATATACAAAAAATTTAGAATATGATGACCTCAGCATGCAAAAA 12 24345222 0.972305517 5 11 64 0.888888889 1.204119983 0.055555556 0.333333333 0.555555556 12 2 0 16 3R:24345167-24345243 7 12 3538 FBgn0039186 880.5666667 39.34 60.32 0.013627588 0.305033045 0.198938992 5 5 5 0.1 dme-miR-305-5p 8mer-A1 AGTACAAA 3R 24345262 24345269 - 3R_24345262_24345269_- 0.605590775 0.605653409 0.605622092 4.43E-05 CG5746 FBtr0334603 24343893 24346710 3R - 24345256 24345328 3'utr CG5746 FlyBase G54203.1 CACGTACCATAACAATTCAATTAGATAAATATCTAAAATTACAAACTGAAAGCACTGAAAGTACAAAATGAAA 31 24345260 0.952942615 6 23 106 0.736842105 0.970036777 0.105263158 0.193548387 0.342105263 31 8 2 28 3R:24345256-24345328 8 CG5746 FBtr0334603 24343893 24346710 AGTACAAA 8mer-A1 dme-miR-305-5p 3R - 24345249 24345308 3'utr CG5746 FlyBase G40930.1 TTAGATAAATATCTAAAATTACAAACTGAAAGCACTGAAAGTACAAAATGAAAATATAAA 27 24345267 0.698878618 7 21 91 0.813953488 0.84509804 0.023255814 0.444444444 0.651162791 27 4 4 35 3R:24345249-24345308 8 24 3539 FBgn0039186 880.5666667 39.34 60.32 0.027255177 0.61006609 0.397877984 -9 -2 -5.5 0.1 dme-miR-14-3p 8mer-A1 AAGACTGA 3R 24345630 24345637 - 3R_24345630_24345637_- 0.643565249 0.643564988 0.643565118 1.41E-07 CG5746 FBtr0334603 24343893 24346710 3R - 24345545 24345674 3'utr CG5746 FlyBase G54205.1 AGACGAATAATGAGTGAAAAATGTGAAAAAAAAACGTAAGACTGAATATATTCACGAACCGAAGCTGCACTGCAAGCATACAAGTCAAGAAAAATGAGAGACAAATGAATGAAATAACAGAGTTTTAAGT 42 24345638 0.930267726 12 41 151 0.978723404 1.662757832 0.170212766 0.119047619 0.212765957 42 1 0 46 3R:24345545-24345674 8 CG5746 FBtr0334603 24343893 24346710 AAGACTGA 8mer-A1 dme-miR-14-3p 3R - 24345597 24345648 3'utr CG5746 FlyBase G40932.1 AAAAAAAACGTAAGACTGAATATATTCACGAACCGAAGCTGCACTGCAAGCA 21 24345638 0.919651211 4 18 63 0.870967742 1.431363764 0 0.380952381 0.580645161 21 4 0 27 3R:24345597-24345648 8 20.5 3540 FBgn0039186 880.5666667 39.34 60.32 0.023280463 0.521098119 0.339854111 1 1 1 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 24346179 24346184 - 3R_24346179_24346184_- 1 1 1 0 CG5746 FBtr0334603|FBtr0334602|FBtr0273282|FBtr0084631|FBtr0084630|FBtr0334601|FBtr0273283 24343893|24345790|24345790|24345790|24345790|24345790|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 3R - 24346008 24346201 3'utr CG5746 FlyBase G54207.1 AATGAGAGTACGTAACATGATCTTTTGAATGAACTAAATTTAAACATTTTGTGAATCATGTAAAATTGTATACAAATGAATGCAATGTATATTTTAGTTTTTAAGCTGAAAACCGCAATCCACTCTCGACACAATTATTTTCTATCCCACATGCATCTGAAAGCGTTTATGATTTTGCAAGATTGTGTTTTTTT 61 24346184 0.980956857 17 60 438 0.987179487 1.886490725 0.166666667 0.229508197 0.397435897 61 1 0 77 3R:24346008-24346201 6 CG5746 FBtr0273283|FBtr0084630|FBtr0334601|FBtr0273282|FBtr0084631|FBtr0334603|FBtr0334602 24345790|24345790|24345790|24345790|24345790|24343893|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 TGATCT 6mer3-8 dme-bantam-3p 3R - 24346140 24346207 3'utr CG5746 FlyBase G40934.1 CGGAAAAATGAGAGTACGTAACATGATCTTTTGAATGAACTAAATTTAAACATTTTGTGAATCATGTA 40 24346183 0.981501476 5 39 287 0.983050847 1.763427994 0.271186441 0.4 0.593220339 40 1 0 58 3R:24346140-24346207 6 36.5 3541 FBgn0039186 880.5666667 39.34 60.32 0.041450581 0.927808846 0.605106101 0 -1 -0.5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 3R 24346235 24346241 - 3R_24346235_24346241_- 0.665489446 0.666165501 0.665827473 0.000478075 CG5746 FBtr0334603|FBtr0334602|FBtr0273282|FBtr0084631|FBtr0084630|FBtr0334601|FBtr0273283 24343893|24345790|24345790|24345790|24345790|24345790|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 3R - 24346228 24346333 3'utr CG5746 FlyBase G54208.1 TAGACAAACGGAGCTAGACTGCACTGAGCTCCAGCCTAAGAAAATTAAATGTGCTCCTCCTTAGTTCCATTTACAATTACAAGTCAACTGTGACCAAAGTATGCTA 25 24346264 0.972417503 15 23 144 0.935483871 1.462397998 0.193548387 0.2 0.35483871 25 2 0 29 3R:24346228-24346333 7 CG5746 FBtr0273283|FBtr0084630|FBtr0334601|FBtr0273282|FBtr0084631|FBtr0334603|FBtr0334602 24345790|24345790|24345790|24345790|24345790|24343893|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 24346226 24346289 3'utr CG5746 FlyBase G40935.1 TTAAATGTGCTCCTCCTTAGTTCCATTTACAATTACAAGTCAACTGTGACCAAAGTATGCTACA 15 24346245 0.725993815 10 15 102 1 1.342422681 0.136363636 0.4 0.590909091 15 0 0 22 3R:24346226-24346289 7 7.5 3542 FBgn0039186 880.5666667 39.34 60.32 0.008517243 0.190645653 0.12433687 23 4 13.5 0.1 dme-miR-1007-3p 6mer3-8 TGAGCT 3R 24346304 24346309 - 3R_24346304_24346309_- 0.99824533 0.998427008 0.998336169 0.000128481 CG5746 FBtr0334603|FBtr0334602|FBtr0273282|FBtr0084631|FBtr0084630|FBtr0334601|FBtr0273283 24343893|24345790|24345790|24345790|24345790|24345790|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 3R - 24346228 24346333 3'utr CG5746 FlyBase G54208.1 TAGACAAACGGAGCTAGACTGCACTGAGCTCCAGCCTAAGAAAATTAAATGTGCTCCTCCTTAGTTCCATTTACAATTACAAGTCAACTGTGACCAAAGTATGCTA 25 24346309 0.972417503 15 23 144 0.935483871 1.462397998 0.193548387 0.2 0.35483871 25 2 0 29 3R:24346228-24346333 6 CG5746 FBtr0273283|FBtr0084630|FBtr0334601|FBtr0273282|FBtr0084631|FBtr0334603|FBtr0334602 24345790|24345790|24345790|24345790|24345790|24343893|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 TGAGCT 6mer3-8 dme-miR-1007-3p 3R - 24346297 24346330 3'utr CG5746 FlyBase G40936.1 ACAAACGGAGCTAGACTGCACTGAGCTCCAGCCT 7 24346309 0.801854738 2 7 20 1 1.041392685 0 0.142857143 0.454545455 7 0 0 11 3R:24346297-24346330 6 7.5 3543 FBgn0039186 880.5666667 39.34 60.32 0.008517243 0.190645653 0.12433687 0 0 0 0.1 dme-miR-277-3p 7mer-A1 GCATTTA 3R 24346476 24346482 - 3R_24346476_24346482_- 0.823349108 0.823295042 0.823322075 3.83E-05 CG5746 FBtr0334603|FBtr0334602|FBtr0273282|FBtr0084631|FBtr0084630|FBtr0334601|FBtr0273283 24343893|24345790|24345790|24345790|24345790|24345790|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 3R - 24346440 24346576 3'utr CG5746 FlyBase G54210.1 AATTAACTTGCTATACATAACACGCAAACACACACATACGCGGTCACTCAAAGCATACAATTTTAGTTTTAAGTATAAAGTTCTCTTTTTCTTAGCATTTAAGCAAACTAGTGTTTCGACGTCTTTCTACATAAACC 22 24346490 0.991484007 15 20 204 0.931034483 1.431363764 0.068965517 0.272727273 0.448275862 22 2 0 27 3R:24346440-24346576 7 CG5746 FBtr0273283|FBtr0084630|FBtr0334601|FBtr0273282|FBtr0084631|FBtr0334603|FBtr0334602 24345790|24345790|24345790|24345790|24345790|24343893|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 GCATTTA 7mer-A1 dme-miR-277-3p 3R - 24346448 24346506 3'utr CG5746 FlyBase G40938.1 AAGTATAAAGTTCTCTTTTTCTTAGCATTTAAGCAAACTAGTGTTTCGACGTCTTTCTA 6 24346491 0.994884186 5 5 63 0.857142857 0.77815125 0.285714286 0.166666667 0.285714286 6 1 0 6 3R:24346448-24346506 7 4 3544 FBgn0039186 880.5666667 39.34 60.32 0.004542529 0.101677682 0.066312997 8 9 8.5 0.1 dme-miR-7-5p 6mer2-7 TCTTCC 3R 24355848 24355853 + 3R_24355848_24355853_+ 0.999916266 0.999979853 0.99994806 4.50E-05 CG6454 FBtr0273323|FBtr0273324|FBtr0330373 24355777|24355777|24355801 24356241|24356241|24356241 3R + 24355821 24355869 3'utr CG6454 FlyBase G45385.1 CGTCCCAAAAGCGTATACTCTCTATTTTCTTCCGCTTAGCTAGAACTAT 7 24355847 0.714462663 5 6 64 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3R:24355821-24355869 6 CG6454 FBtr0330373|FBtr0273323|FBtr0273324 24355801|24355777|24355777 24356241|24356241|24356241 TCTTCC 6mer2-7 dme-miR-7-5p 3R + 24355809 24355893 3'utr CG6454 FlyBase G34254.1 TTTTACGCGAATCGTCCCAAAAGCGTATACTCTCTATTTTCTTCCGCTTAGCTAGAACTATCAGCTCTGCCCAGCAACTGGAGTT 12 24355848 0.950465007 9 11 82 0.933333333 1.146128036 0.066666667 0.25 0.4 12 1 0 14 3R:24355809-24355893 6 4.5 3545 FBgn0039187 605.7933333 16.75333333 25.68 0.007428276 0.268603263 0.175233645 1 0 0.5 0.1 dme-miR-252-5p 6mer3-8 GTACTT 3R 24536417 24536422 - 3R_24536417_24536422_- 0.999999975 0.999997151 0.999998563 1.98E-06 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 3R - 24536316 24536446 3'utr CG5789 FlyBase G54228.1 CTATATTCATACAACCGAAATATTGTACTTGAAACTCTAGATAGAAATTTAATAAATAATCGTCGGGTTTATTAAAATATAAATAAGTTTCACACAAATTGGTAATAAAATTGTACATTTAACTTATTGAG 15 24536423 0.978457433 10 14 105 1 1.255272505 0.111111111 0.2 0.333333333 15 0 0 18 3R:24536316-24536446 6 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 GTACTT 6mer3-8 dme-miR-252-5p 3R - 24536315 24536438 3'utr CG5789 FlyBase G40949.1 ATACAACCGAAATATTGTACTTGAAACTCTAGATAGAAATTTAATAAATAATCGTCGGGTTTATTAAAATATAAATAAGTTTCACACAAATTGGTAATAAAATTGTACATTTAACTTATTGAGT 19 24536423 0.981217905 10 19 141 1 1.380211242 0.041666667 0.210526316 0.375 19 0 0 24 3R:24536315-24536438 6 8 3546 FBgn0039207 633.5166667 14.68333333 22.4 0.012627923 0.544835414 0.357142857 1 1 1 0.1 dme-miR-34-5p 6mer2-7 ACTGCC 3R 24536690 24536695 - 3R_24536690_24536695_- 0.978616901 0.999990553 0.989303727 0.015113488 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 3R - 24536647 24536743 3'utr CG5789 FlyBase G54230.1 CATTTCCTTAGTTTAGTTAAGTTTGTTAACGAAAAGTCTAGAATGTGTACTGCCTTATACGTATTGTACTTAGATGTAATCTCCACCAGGGACTACG 76 24536689 0.64873482 15 67 595 0.88 1.643452676 0.08 0.263157895 0.44 76 11 1 88 3R:24536647-24536743 6 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 ACTGCC 6mer2-7 dme-miR-34-5p 3R - 24536640 24536720 3'utr CG5789 FlyBase G40951.1 TGTTAACGAAAAGTCTAGAATGTGTACTGCCTTATACGTATTGTACTTAGATGTAATCTCCACCAGGGACTACGTTGTAAT 67 24536689 0.985773058 10 60 502 0.908045977 1.420505837 0.16091954 0.23880597 0.413793103 67 6 2 79 3R:24536640-24536720 6 54 3547 FBgn0039207 633.5166667 14.68333333 22.4 0.085238484 3.677639047 2.410714286 -6 -6 -6 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 24536787 24536792 - 3R_24536787_24536792_- 0.999998591 0.99999915 0.999998871 4.24E-07 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 3R - 24536759 24536843 3'utr CG5789 FlyBase G54231.1 CAACTCTTGGGCTCCCAATGGAAGAGGAATCTTGTCCAAAACAAAAACCGTACCAAAATGATTTTCTTGTGCACATACACATATT 32 24536785 0.864358553 10 31 204 0.974358974 1.579783597 0.025641026 0.1875 0.333333333 32 1 0 38 3R:24536759-24536843 6 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 24536765 24536891 3'utr CG5789 FlyBase G40952.1 CGGAAATCGCATTTAACCAAATCTGGTGCTTATAATGGCTCAAGGTTACAACTCTTGGGCTCCCAATGGAAGAGGAATCTTGTCCAAAACAAAAACCGTACCAAAATGATTTTCTTGTGCACATACA 38 24536784 0.985923419 14 33 271 0.875 1.146128036 0.0625 0.236842105 0.395833333 38 4 2 42 3R:24536765-24536891 6 23 3548 FBgn0039207 633.5166667 14.68333333 22.4 0.03630528 1.566401816 1.026785714 -7 -8 -7.5 0.1 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3R 24536862 24536868 - 3R_24536862_24536868_- 0.620203944 0.604027017 0.61211548 0.011438796 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 3R - 24536846 24536960 stop_codon CG5789 FlyBase G54232.1 CGGGACGAGCGAGATCGCGATCAGGATGAGAGCCAGGAGTGAGAAACGGTGGCCCAAAAAAATATCCATCGGAAATCGCATTTAACCAAATCTGGTGCTTATAATGGCTCAAGGT 18 24536868 0.969171997 8 18 102 1 1.322219295 0.047619048 0.166666667 0.285714286 18 0 0 21 3R:24536846-24536960 7 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3R - 24536765 24536891 3'utr CG5789 FlyBase G40952.1 CGGAAATCGCATTTAACCAAATCTGGTGCTTATAATGGCTCAAGGTTACAACTCTTGGGCTCCCAATGGAAGAGGAATCTTGTCCAAAACAAAAACCGTACCAAAATGATTTTCTTGTGCACATACA 38 24536860 0.985923419 14 33 271 0.875 1.146128036 0.0625 0.236842105 0.395833333 38 4 2 42 3R:24536765-24536891 7 12.5 3549 FBgn0039207 633.5166667 14.68333333 22.4 0.01973113 0.851305335 0.558035714 0 -8 -4 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 3R 24556533 24556538 + 3R_24556533_24556538_+ 0.99999982 0.999940821 0.999970321 4.17E-05 Esyt2 FBtr0084647|FBtr0334336|FBtr0084648|FBtr0306024 24556324|24556324|24556324|24556324 24556549|24556549|24556549|24556549 3R + 24556507 24556547 3'utr Esyt2 FlyBase G45431.1 AATTTATTATAGTCAATAAATCGAACTGTGTTTTCAACAAA 14 24556538 0.971012952 3 13 106 0.933333333 1.146128036 0 0.071428571 0.133333333 14 1 0 14 3R:24556507-24556547 6 Esyt2 FBtr0306024|FBtr0084648|FBtr0334336|FBtr0084647 24556324|24556324|24556324|24556324 24556549|24556549|24556549|24556549 TGTGTT 6mer3-8 dme-miR-317-3p 3R + 24556500 24556547 3'utr Esyt2 FlyBase G34280.1 AACTATCAATTTATTATAGTCAATAAATCGAACTGTGTTTTCAACAAA 15 24556539 0.9820092 6 15 108 1 1.230448921 0.058823529 0.133333333 0.235294118 15 0 0 17 3R:24556500-24556547 6 14 3550 FBgn0266758 3194.34 129.4666667 198.0166667 0.004382752 0.108135942 0.070701119 -5 -6 -5.5 0.1 dme-miR-317-3p 8mer-A1 TGTGTTCA 3R 24558703 24558710 - 3R_24558703_24558710_- 0.629665533 0.627972008 0.628818771 0.001197485 CG13624 FBtr0084672 24557366 24560507 3R - 24558676 24558733 3'utr CG13624 FlyBase G54253.1 CTGCTATTTGTTGCTTAACGTGTTGTGTTCAATTGATATCAAAAGAATTAACTTTCGA 145 24558711 0.751239715 5 143 1366 1 2.292256071 0.433673469 0.289655172 0.474489796 145 0 0 196 3R:24558676-24558733 8 CG13624 FBtr0084672 24557366 24560507 TGTGTTCA 8mer-A1 dme-miR-317-3p 3R - 24558679 24558744 3'utr CG13624 FlyBase G40969.1 AGCCTTTCTTACTGCTATTTGTTGCTTAACGTGTTGTGTTCAATTGATATCAAAAGAATTAACTTT 142 24558711 0.755416847 9 141 1367 0.976303318 2.31386722 0.450236967 0.38028169 0.582938389 142 5 0 206 3R:24558679-24558744 8 141.5 3551 FBgn0039209 1863.993333 50.61333333 77.60666667 0.075912289 2.795706006 1.823296968 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 24558828 24558834 - 3R_24558828_24558834_- 0.790207878 0.790376528 0.790292203 0.000119218 CG13624 FBtr0084672|FBtr0084672|FBtr0084672 24557366|24557366|24557366 24560507|24560507|24560507 3R - 24558772 24558887 3'utr CG13624 FlyBase G54254.1 TTCTAATTTGCATTATCAAAATGAATACTTTTGCTCTGCTTCGATGCTAATTTTGTGATATTTGTATTCAAATTTTCTTTGTTGTGTAGTTCTTTGGGGCGGGATCCTCCTATTTT 179 24558836 0.99371934 18 168 2108 0.944954128 1.614897216 0.26146789 0.184357542 0.330275229 179 8 4 206 3R:24558772-24558887 7 CG13624 FBtr0084672|FBtr0084672|FBtr0084672 24557366|24557366|24557366 24560507|24560507|24560507 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 24558812 24558861 3'utr CG13624 FlyBase G40970.1 ACTTTTGCTCTGCTTCGATGCTAATTTTGTGATATTTGTATTCAAATTTT 126 24558836 0.715429481 11 113 1500 0.914893617 1.33243846 0.271276596 0.412698413 0.606382979 126 9 7 172 3R:24558812-24558861 7 147 3552 FBgn0039209 1863.993333 50.61333333 77.60666667 0.078862943 2.904373024 1.894167168 2 2 2 0.1 dme-miR-988-3p 6mer3-8 ACAAGG 3R 24560273 24560278 - 3R_24560273_24560278_- 0.966899944 0.523384051 0.745141997 0.31361303 CG13624 FBtr0084674|FBtr0084673|FBtr0084672|FBtr0345204|FBtr0084675 24559278|24559278|24557366|24559787|24559787 24560507|24560507|24560507|24560507|24560507 3R - 24560263 24560306 3'utr CG13624 FlyBase G54261.1 ATTGCGGGTGGTTCAACGGATTTTGTGAACAAGGTGCTGGAGAA 6 24560285 0.968466207 5 6 38 1 0.77815125 0 0 0 6 0 0 6 3R:24560263-24560306 6 CG13624 FBtr0084673|FBtr0084674|FBtr0084675|FBtr0345204|FBtr0084672 24559278|24559278|24559787|24559787|24557366 24560507|24560507|24560507|24560507|24560507 ACAAGG 6mer3-8 dme-miR-988-3p 3R - 24560265 24560315 3'utr CG13624 FlyBase G40975.1 GGAATCCGCATTGCGGGTGGTTCAACGGATTTTGTGAACAAGGTGCTGGAG 6 24560304 0.973504149 5 6 33 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 3R:24560265-24560315 6 3 3553 FBgn0039209 1863.993333 50.61333333 77.60666667 0.001609448 0.059272919 0.038656473 7 26 16.5 0.1 dme-miR-965-3p 6mer3-8 TACGCT 3R 24560392 24560397 - 3R_24560392_24560397_- 0.800840729 0.662568692 0.731704711 0.097773069 CG13624 FBtr0084674|FBtr0084673|FBtr0084672|FBtr0345204|FBtr0084675 24559278|24559278|24557366|24559787|24559787 24560507|24560507|24560507|24560507|24560507 3R - 24560382 24560448 5'utr CG13624 FlyBase G54262.1 AAGAACCTGGGCGAATCCACCGAGGAGGTGGACCAACAAATTGCACGCATTTACGCTACCGCCTCTT 8 24560398 0.917592041 6 7 27 1 0.903089987 0.25 0 0 8 0 0 8 3R:24560382-24560448 6 CG13624 FBtr0084673|FBtr0084674|FBtr0084675|FBtr0345204|FBtr0084672 24559278|24559278|24559787|24559787|24557366 24560507|24560507|24560507|24560507|24560507 TACGCT 6mer3-8 dme-miR-965-3p 3R - 24560385 24560434 5'utr CG13624 FlyBase G40976.1 ATCCACCGAGGAGGTGGACCAACAAATTGCACGCATTTACGCTACCGCCT 6 24560398 0.913816239 4 6 21 1 1.041392685 0 0.333333333 0.636363636 6 0 0 11 3R:24560385-24560434 6 3.5 3554 FBgn0039209 1863.993333 50.61333333 77.60666667 0.001877689 0.069151739 0.045099218 1 1 1 0.1 dme-miR-33-5p 7mer-A1 AATGCAA 3R 24623388 24623394 + 3R_24623388_24623394_+ 0.782483323 0.782557789 0.782520556 5.27E-05 mld FBtr0304912|FBtr0304915|FBtr0304914|FBtr0304913|FBtr0111012 24623171|24623171|24623171|24623171|24623171 24623899|24623899|24623899|24623899|24623899 3R + 24623365 24623410 3'utr mld FlyBase G45457.1 AAAAGAACCAGCAGACTGCATTGAATGCAATCCCATATTGCACTAA 18 24623385 0.914976998 3 17 56 0.956521739 1.342422681 0.47826087 0.222222222 0.391304348 18 1 0 22 3R:24623365-24623410 7 mld FBtr0111012|FBtr0304914|FBtr0304913|FBtr0304912|FBtr0304915 24623171|24623171|24623171|24623171|24623171 24623899|24623899|24623899|24623899|24623899 AATGCAA 7mer-A1 dme-miR-33-5p 3R + 24623365 24623483 3'utr mld FlyBase G34297.1 AAAAGAACCAGCAGACTGCATTGAATGCAATCCCATATTGCACTAAAAACAAAAGAACACCTAGCGACTAAGCCAAGGATACACTCCCTCAGACACAAATCTTAAGGCTACAAAATATT 39 24623385 0.999256649 9 37 109 0.967213115 1.293730757 0.163934426 0.461538462 0.655737705 39 0 2 59 3R:24623365-24623483 7 15 3555 FBgn0263490 229.3433333 3.983333333 6.11 0.065404125 3.765690377 2.454991817 3 3 3 0.1 dme-miR-304-5p 6mer2-7 GAGATT 3R 24635485 24635490 - 3R_24635485_24635490_- 0.985953605 0.999200314 0.992576959 0.009366831 puf FBtr0084668|FBtr0330309|FBtr0330308|FBtr0306172|FBtr0339135 24635268|24635268|24635268|24635268|24635268 24636457|24636403|24636457|24636457|24636457 3R - 24635412 24635514 3'utr puf FlyBase G54294.1 TGTTTAGCACGTAAGGAGTATAGAGAGATTCGTTGTCCCACGTGAAACACAAAAGGACAAAAATGATAACATTAACATAAAGTAACTAACTGGCCAGCCCCGC 62 24635486 0.979192138 8 59 402 0.957142857 1.826074803 0.414285714 0.129032258 0.228571429 62 3 0 67 3R:24635412-24635514 6 puf FBtr0339135|FBtr0330308|FBtr0306172|FBtr0084668|FBtr0330309 24635268|24635268|24635268|24635268|24635268 24636457|24636457|24636457|24636457|24636403 GAGATT 6mer2-7 dme-miR-304-5p 3R - 24635468 24635515 3'utr puf FlyBase G41005.1 ATGTTTAGCACGTAAGGAGTATAGAGAGATTCGTTGTCCCACGTGAAA 31 24635486 0.807625414 3 30 203 0.955555556 1.156347201 0.222222222 0.387096774 0.577777778 31 0 2 43 3R:24635468-24635515 6 44 3556 FBgn0039214 1184.2 11.81333333 18.17333333 0.037155886 3.724604966 2.421129861 -4 -4 -4 0.1 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 3R 24636299 24636306 - 3R_24636299_24636306_- 0.625364002 0.625364009 0.625364006 0 puf FBtr0084668|FBtr0330309|FBtr0330308|FBtr0306172|FBtr0339135 24635268|24635268|24635268|24635268|24635268 24636457|24636403|24636457|24636457|24636457 3R - 24636280 24636320 3'utr puf FlyBase G54298.1 AAGCAACCCAAGGTTGGTGCTAATGGTTGGGTTTGGGTGCG 10 24636307 0.973345582 6 10 67 1 1.146128036 0.071428571 0.4 0.571428571 10 0 0 14 3R:24636280-24636320 8 puf FBtr0339135|FBtr0330308|FBtr0306172|FBtr0084668|FBtr0330309 24635268|24635268|24635268|24635268|24635268 24636457|24636457|24636457|24636457|24636403 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 3R - 24636279 24636320 3'utr puf FlyBase G41008.1 AAGCAACCCAAGGTTGGTGCTAATGGTTGGGTTTGGGTGCGT 8 24636307 0.948334022 3 7 35 1 1 0 0.25 0.4 8 0 0 10 3R:24636279-24636320 8 8.5 3557 FBgn0039214 1184.2 11.81333333 18.17333333 0.007177842 0.719525959 0.467718269 1 1 1 0.1 dme-miR-14-3p 6mer3-8 AAGACT 3R 24653288 24653293 + 3R_24653288_24653293_+ 1 0.999999989 0.999999994 0 ash2 FBtr0084659|FBtr0306171|FBtr0084660 24653201|24653201|24653201 24653376|24653376|24653376 3R + 24653261 24653303 3'utr ash2 FlyBase G45491.1 CTATACTTTGGAAAGCAGAAATTTGAAAAGACTATCATCATAC 27 24653283 0.596601202 4 26 150 0.972972973 1.556302501 0.027027027 0.296296296 0.486486486 27 1 0 36 3R:24653261-24653303 6 ash2 FBtr0084659|FBtr0306171|FBtr0084660 24653201|24653201|24653201 24653376|24653376|24653376 AAGACT 6mer3-8 dme-miR-14-3p 3R + 24653256 24653302 3'utr ash2 FlyBase G34324.1 ATGCACTATACTTTGGAAAGCAGAAATTTGAAAAGACTATCATCATA 29 24653295 0.928222065 7 26 149 0.921052632 1.544068044 0.052631579 0.275862069 0.447368421 29 3 0 35 3R:24653256-24653302 6 24.5 3558 FBgn0000139 191.3333333 12.33666667 18.87 0.12804878 1.985949743 1.298357181 5 -7 -1 0.1 dme-miR-1012-3p 7mer-m8 TTGACTA 3R 24659209 24659215 + 3R_24659209_24659215_+ 0.630246862 0.62985021 0.630048536 0.000280509 CG6695 FBtr0089915 24658378 24659379 3R + 24659194 24659231 stop_codon CG6695 FlyBase G45502.1 AGCTCAAGAAACTGGTTGACTATTGATCCCAAAACCGT 24 24659216 0.671720792 3 23 129 0.965517241 1.447158031 0.068965517 0.208333333 0.344827586 24 1 0 28 3R:24659194-24659231 7 CG6695 FBtr0089915 24658378 24659379 TTGACTA 7mer-m8 dme-miR-1012-3p 3R + 24659197 24659230 stop_codon CG6695 FlyBase G34330.1 TCAAGAAACTGGTTGACTATTGATCCCAAAACCG 11 24659216 0.666410168 4 11 58 1 1.278753601 0.210526316 0.454545455 0.684210526 11 0 0 19 3R:24659197-24659230 7 17 3559 FBgn0039215 827.2766667 31.71333333 48.7 0.020549353 0.536052134 0.349075975 -7 -7 -7 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 3R 24760277 24760282 + 3R_24760277_24760282_+ 0.707188163 0.734206311 0.720697237 0.019104682 asp FBtr0084692 24760231 24760513 3R + 24760167 24760373 stop_codon asp FlyBase G45533.1 ACGTTTATCTCGTCCGTTTACGCCTTCGATACGATTTTGTGCAAGCTGCAGATCGACATGTTTTAGATTTAGGAAAATTCATCTTTAAATGTTTAATGTTAAAACCATTCTGTGTTGTGTTTTAAAATAGTCACATAAATTCTTAGACCATGCTAGTTTTTTGGAGACAATTAGAAATAGTTTAAGATAATCTAAGACCGTCTTAAC 88 24760275 0.831793272 25 81 906 0.923076923 1.982271233 0.153846154 0.159090909 0.288461538 88 8 0 96 3R:24760167-24760373 6 asp FBtr0084692 24760231 24760513 TGTGTT 6mer3-8 dme-miR-317-3p 3R + 24760248 24760354 3'utr asp FlyBase G34349.1 TCTTTAAATGTTTAATGTTAAAACCATTCTGTGTTGTGTTTTAAAATAGTCACATAAATTCTTAGACCATGCTAGTTTTTTGGAGACAATTAGAAATAGTTTAAGAT 39 24760275 0.877326542 13 37 392 0.964912281 1.740362689 0.192982456 0.333333333 0.543859649 39 2 0 55 3R:24760248-24760354 6 44 3560 FBgn0000140 1001.803333 19.02666667 29.17333333 0.043920796 2.312543798 1.508226691 2 2 2 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG 3R 24769845 24769850 + 3R_24769845_24769850_+ 0.99969463 0.999877588 0.999786109 0.000129401 CG13631 FBtr0084693|FBtr0339253 24769772|24769772 24770111|24770933 3R + 24769815 24769890 3'utr CG13631 FlyBase G45538.1 CGAACGGTCGCAGGAGCGGTCGAGTGCTGTGCTGTGGGTTGTCGGCGGGGGATCTCTGGCTGATCGGAGGAAGGAT 173 24769843 0.767996026 12 168 1129 0.955 1.980003372 0.545 0.12716763 0.245 173 8 1 191 3R:24769815-24769890 6 CG13631 FBtr0339253|FBtr0084693 24769772|24769772 24770933|24770111 GCTGTG 6mer2-7 dme-miR-1008-3p 3R + 24769815 24769915 3'utr CG13631 FlyBase G34353.1 CGAACGGTCGCAGGAGCGGTCGAGTGCTGTGCTGTGGGTTGTCGGCGGGGGATCTCTGGCTGATCGGAGGAAGGATAACACGGAGATATGGATTTGGATAT 206 24769843 0.770927398 13 199 1349 0.968944099 1.892094603 0.562111801 0.412621359 0.624223602 206 7 3 312 3R:24769815-24769915 6 165.5 3561 FBgn0040600 1409.473333 109.07 167.31 0.117419745 1.517374163 0.989181758 2 2 2 0.1 dme-miR-995-5p 6mer3-8 AATTCG 3R 24769925 24769930 + 3R_24769925_24769930_+ 0.999558243 0.999591288 0.999574765 2.34E-05 CG13631 FBtr0084693|FBtr0339253 24769772|24769772 24770111|24770933 3R + 24769893 24769955 3'utr CG13631 FlyBase G45539.1 CACGGAGATATGGATTTGGATATGACACAAAGAATTCGCGCCACTTCAAGGACCTAAAGAATT 24 24769927 0.80762608 6 20 109 0.857142857 0.903089987 0.107142857 0.125 0.25 24 2 2 24 3R:24769893-24769955 6 CG13631 FBtr0339253|FBtr0084693 24769772|24769772 24770933|24770111 AATTCG 6mer3-8 dme-miR-995-5p 3R + 24769921 24769956 3'utr CG13631 FlyBase G34354.1 AAAGAATTCGCGCCACTTCAAGGACCTAAAGAATTC 13 24769927 0.8268191 3 13 55 1 1.278753601 0.157894737 0.307692308 0.526315789 13 0 0 19 3R:24769921-24769956 6 16.5 3562 FBgn0040600 1409.473333 109.07 167.31 0.0117065 0.151278995 0.098619329 -2 -2 -2 0.1 dme-miR-282-5p 7mer-m8 AGAGGCT 3R 24770042 24770048 + 3R_24770042_24770048_+ 0.631524561 0.631524568 0.631524565 0 CG13631 FBtr0084693|FBtr0339253 24769772|24769772 24770111|24770933 3R + 24769968 24770108 3'utr CG13631 FlyBase G45540.1 GTTCCCAAGATTCCAATGGGTAATCCAAATAGTTCGATTCGTATGACCCGAATGGGTGATCCCCGGATCACGTTAGAGGCTTCAAAGTGTTGGCAGGGGACAGGGCAATCTGTGTAACGACATTCCTTCTCAACAATAACT 147 24770041 0.975419638 16 136 859 0.920903955 1.911157609 0.271186441 0.170068027 0.310734463 147 13 1 163 3R:24769968-24770108 7 CG13631 FBtr0339253|FBtr0084693 24769772|24769772 24770933|24770111 AGAGGCT 7mer-m8 dme-miR-282-5p 3R + 24769998 24770102 3'utr CG13631 FlyBase G34355.1 AGTTCGATTCGTATGACCCGAATGGGTGATCCCCGGATCACGTTAGAGGCTTCAAAGTGTTGGCAGGGGACAGGGCAATCTGTGTAACGACATTCCTTCTCAACA 105 24770041 0.936151021 13 93 551 0.873493976 2.161368002 0.313253012 0.419047619 0.63253012 105 21 0 145 3R:24769998-24770102 7 98.5 3563 FBgn0040600 1409.473333 109.07 167.31 0.069884259 0.903089759 0.588727512 1 1 1 0.1 dme-miR-305-3p 6mer2-7 TGTGCC 3R 24770673 24770678 + 3R_24770673_24770678_+ 0.999999041 0.999999999 0.99999952 7.07E-07 CG13631 FBtr0339253 24769772 24770933 3R + 24770600 24770744 3'utr CG13631 FlyBase G45545.2 TTAATATCTATACTACTGTTACTACTCTAATAATCATATTGTATGTGCCGCACGAGGAGAGGGAACTCAAAATTGTGCCCCCAAATGGGTGGTGGATGGTGTTTGCTCAAGTGATTCGTACTAAAATGGCAGCGGGAATGCGATT 57 24770674 0.962280244 20 52 302 0.936507937 1.770852012 0.206349206 0.087719298 0.174603175 57 4 0 59 3R:24770600-24770744 6 CG13631 FBtr0339253 24769772 24770933 TGTGCC 6mer2-7 dme-miR-305-3p 3R + 24770640 24770739 3'utr CG13631 FlyBase G34359.1 GTATGTGCCGCACGAGGAGAGGGAACTCAAAATTGTGCCCCCAAATGGGTGGTGGATGGTGTTTGCTCAAGTGATTCGTACTAAAATGGCAGCGGGAATG 35 24770674 0.9877235 14 32 172 0.928571429 1.716003344 0.321428571 0.371428571 0.607142857 35 4 0 52 3R:24770640-24770739 6 22 3564 FBgn0040600 1409.473333 109.07 167.31 0.015608667 0.201705327 0.131492439 -1 -1 -1 0.1 dme-miR-1006-3p 7mer-A1 GAATTTA 3R 24770792 24770798 + 3R_24770792_24770798_+ 0.823349125 0.823349549 0.823349337 2.83E-07 CG13631 FBtr0339253 24769772 24770933 3R + 24770747 24770825 3'utr CG13631 FlyBase G45546.1 TCGCAGAGTGAGAAGTGCTGTAAGTGGCGAATGTTTCGAATGAGAGAATTTAGTTTAGAGAGCGGAGCATCTACAATAT 24 24770796 0.978983812 11 23 159 0.965517241 1.447158031 0.275862069 0.166666667 0.310344828 24 1 0 28 3R:24770747-24770825 7 CG13631 FBtr0339253 24769772 24770933 GAATTTA 7mer-A1 dme-miR-1006-3p 3R + 24770745 24770844 3'utr CG13631 FlyBase G34360.1 AATCGCAGAGTGAGAAGTGCTGTAAGTGGCGAATGTTTCGAATGAGAGAATTTAGTTTAGAGAGCGGAGCATCTACAATATATTTATTATACCTATGAAA 24 24770799 0.978507157 13 22 149 0.967741935 1.176091259 0.129032258 0.260869565 0.451612903 23 0 1 30 3R:24770745-24770844 7 16.5 3565 FBgn0040600 1409.473333 109.07 167.31 0.0117065 0.151278995 0.098619329 -4 -7 -5.5 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 24784792 24784798 - 3R_24784792_24784798_- 0.621512029 0.661615645 0.641563837 0.028357528 CG5805 FBtr0339255|FBtr0084743 24784550|24784735 24785395|24785395 3R - 24784737 24784855 3'utr CG5805 FlyBase G54348.1 GGGTCGCCCCTCCCCAGAGGTCGGGAGGCACTACACTTAGCTAAGCATTCGTGTGTGTGTGTTCTCTGAGTGGATAAACTAGTTTTAGTCTGCATTATAATAAAGTACAAACCAAGAAT 24 24784789 0.98179833 14 22 188 0.935483871 1.462397998 0.258064516 0.291666667 0.451612903 24 2 0 29 3R:24784737-24784855 7 CG5805 FBtr0339255|FBtr0084743 24784550|24784735 24785395|24785395 TGTGTTC 7mer-m8 dme-miR-317-3p 3R - 24784739 24784819 3'utr CG5805 FlyBase G41044.1 TTAGCTAAGCATTCGTGTGTGTGTGTTCTCTGAGTGGATAAACTAGTTTTAGTCTGCATTATAATAAAGTACAAACCAAGA 13 24784799 0.986793487 7 12 99 1 1.204119983 0.5 0.230769231 0.375 13 0 0 16 3R:24784739-24784819 7 9.5 3566 FBgn0039223 334.22 19.37333333 29.52666667 0.028424391 0.490364763 0.321743057 -9 1 -4 0.1 dme-miR-1006-3p 6mer3-8 CGAATT 3R 24784875 24784880 - 3R_24784875_24784880_- 1 0.999997608 0.999998804 1.70E-06 CG5805 FBtr0339255|FBtr0084743 24784550|24784735 24785395|24785395 3R - 24784863 24784927 3'utr CG5805 FlyBase G54348.2 AGCACAGCAATGTTTGCGCCAAACAAAATACCACAAACTGGACATGCCGAATTAGAAATTAATAT 11 24784882 0.98179833 5 10 43 0.933333333 1.146128036 0 0.272727273 0.466666667 11 1 0 14 3R:24784863-24784927 6 CG5805 FBtr0339255|FBtr0084743 24784550|24784735 24785395|24785395 CGAATT 6mer3-8 dme-miR-1006-3p 3R - 24784862 24784901 3'utr CG5805 FlyBase G41045.1 AATACCACAAACTGGACATGCCGAATTAGAAATTAATATC 7 24784876 0.939945793 3 5 25 0.866666667 1.113943352 0 0.714285714 0.866666667 7 2 0 13 3R:24784862-24784901 6 7 3567 FBgn0039223 334.22 19.37333333 29.52666667 0.020944288 0.361321404 0.237073832 2 -4 -1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3R 24785117 24785122 - 3R_24785117_24785122_- 0.524855664 0.771786217 0.64832094 0.174606231 CG5805 FBtr0339255|FBtr0084743 24784550|24784735 24785395|24785395 3R - 24785100 24785136 3'utr CG5805 FlyBase G54351.1 AATATGCAAATACCCCAAAGTGTTGTAGCTTAAAGTG 10 24785115 0.678201112 4 9 55 0.923076923 1.079181246 0.076923077 0.3 0.461538462 10 1 0 12 3R:24785100-24785136 6 CG5805 FBtr0339255|FBtr0084743 24784550|24784735 24785395|24785395 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 24785097 24785136 3'utr CG5805 FlyBase G41047.1 AATATGCAAATACCCCAAAGTGTTGTAGCTTAAAGTGTAC 5 24785115 0.801735196 3 5 34 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:24785097-24785136 6 7.5 3568 FBgn0039223 334.22 19.37333333 29.52666667 0.022440309 0.387130076 0.254007677 -7 -7 -7 0.1 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 24805499 24805506 - 3R_24805499_24805506_- 0.375017156 0.382215171 0.378616163 0.005089755 CG5807 FBtr0331697 24805443 24805557 3R - 24805486 24805534 3'utr CG5807 FlyBase G54386.2 AATTTAAGGAAAACTACCTACGATATTGCTGTGATTCAATGACTTAATT 19 24805509 0.981679455 7 18 145 0.958333333 1.361727836 0.083333333 0.157894737 0.333333333 19 1 0 23 3R:24805486-24805534 8 CG5807 FBtr0331697 24805443 24805557 CTGTGATT 8mer-m1 dme-miR-308-3p 3R - 24805451 24805529 3'utr CG5807 FlyBase G41070.1 AAGGAAAACTACCTACGATATTGCTGTGATTCAATGACTTAATTAAAACTTTAAATGATGCTTTAGGGATGCTATAATA 22 24805508 0.771724634 10 22 195 1 1.556302501 0.222222222 0.363636364 0.611111111 22 0 0 36 3R:24805451-24805529 8 15.5 3569 FBgn0027539 323.6833333 14.69666667 22.53666667 0.047886309 1.054660921 0.687768082 3 2 2.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 24805706 24805712 - 3R_24805706_24805712_- 0.753795619 0.753798016 0.753796818 1.70E-06 CG5807 FBtr0084739|FBtr0084739|FBtr0084739 24805665|24805665|24805665 24806410|24806410|24806410 3R - 24805666 24805734 3'utr CG5807 FlyBase G54387.1 ACTAACAAGCGTCTAAAACTTATGTGATAAAAAATAATAATAAACAAAGCATTTTACTAAATTAATCGA 84 24805714 0.976377962 5 80 517 0.95959596 1.977723605 0.090909091 0.130952381 0.262626263 84 4 0 95 3R:24805666-24805734 7 CG5807 FBtr0084739|FBtr0084739|FBtr0084739 24805665|24805665|24805665 24806410|24806410|24806410 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 24805689 24805736 3'utr CG5807 FlyBase G41071.1 ACACTAACAAGCGTCTAAAACTTATGTGATAAAAAATAATAATAAACA 64 24805714 0.803519252 7 61 386 0.966666667 1.939519253 0.133333333 0.359375 0.544444444 64 3 0 87 3R:24805689-24805736 7 73 3570 FBgn0027539 323.6833333 14.69666667 22.53666667 0.225529066 4.967112724 3.239165804 2 2 2 0.1 dme-miR-2a-2-5p 7mer-m1 GATGAGG 3R 24805795 24805801 - 3R_24805795_24805801_- 0.806543236 0.809148133 0.807845684 0.001841942 CG5807 FBtr0084739 24805665 24806410 3R - 24805774 24805836 3'utr CG5807 FlyBase G54388.1 ATAAGATTTTAACAATGTTCCTTAAGCAGCGAAACGATGAGGCGTGTTCATTTCATTTTACGG 110 24805821 0.977067508 9 107 648 0.9609375 1.788875116 0.0625 0.154545455 0.2734375 110 4 1 123 3R:24805774-24805836 7 CG5807 FBtr0084739 24805665 24806410 GATGAGG 7mer-m1 dme-miR-2a-2-5p 3R - 24805785 24805834 3'utr CG5807 FlyBase G41072.1 AAGATTTTAACAATGTTCCTTAAGCAGCGAAACGATGAGGCGTGTTCATT 70 24805821 0.983464342 4 68 395 0.982608696 1.752048448 0.113043478 0.471428571 0.67826087 70 1 1 113 3R:24805785-24805834 7 38 3571 FBgn0027539 323.6833333 14.69666667 22.53666667 0.117398692 2.585620322 1.686141103 20 20 20 0.1 dme-miR-1006-3p 6mer2-7 GAATTT 3R 24805914 24805919 - 3R_24805914_24805919_- 0.892690212 0.996546805 0.944618509 0.073437706 CG5807 FBtr0084739 24805665 24806410 3R - 24805866 24805920 3'utr CG5807 FlyBase G54389.1 AGAATTTCGTTTCTTGTCGTTCAGAGTGAATTCCATTTCATACATGTTTTTCGCT 12 24805909 0.9908168 5 10 111 0.9375 0.875061263 0.25 0.333333333 0.5 12 0 1 15 3R:24805866-24805920 6 CG5807 FBtr0084739 24805665 24806410 GAATTT 6mer2-7 dme-miR-1006-3p 3R - 24805868 24805931 3'utr CG5807 FlyBase G41073.1 AGGCGTAGTTTAGAATTTCGTTTCTTGTCGTTCAGAGTGAATTCCATTTCATACATGTTTTTCG 10 24805890 0.987842201 3 10 104 1 1.255272505 0 0.7 0.833333333 10 0 0 18 3R:24805868-24805931 6 6 3572 FBgn0027539 323.6833333 14.69666667 22.53666667 0.018536636 0.40825584 0.266232806 -10 -29 -19.5 0.1 dme-miR-307a-3p 6mer2-7 GTTGTG 3R 24806155 24806160 - 3R_24806155_24806160_- 0.999371851 0.999998259 0.999685055 0.000442932 CG5807 FBtr0084739 24805665 24806410 3R - 24806106 24806315 3'utr CG5807 FlyBase G54391.2 TACCAAGTATCGTAACCTTAGTCGTAAGAGCAGTCGCAATACCACCGCTAGTCGCAAGGCAAACGAAATGAACTGTTAAGACACGAGAAAAACATGGGAGATGGGCAGCTGAAACTATATAATATACCTTTACATATGTTATATGATCACGTATAGTTGTGCAGAACTGATACTAATATTTAAATTTTGCAATGTTAACTGTTGTGCTTA 83 24806157 0.912604631 24 76 433 0.91 1.481920138 0.16 0.180722892 0.32 83 7 2 91 3R:24806106-24806315 6 CG5807 FBtr0084739 24805665 24806410 GTTGTG 6mer2-7 dme-miR-307a-3p 3R - 24806130 24806170 3'utr CG5807 FlyBase G41074.2 ATCACGTATAGTTGTGCAGAACTGATACTAATATTTAAATT 21 24806158 0.605658899 8 19 124 0.962962963 1.414973348 0.037037037 0.238095238 0.407407407 21 1 0 26 3R:24806130-24806170 6 25.5 3573 FBgn0027539 323.6833333 14.69666667 22.53666667 0.078780701 1.735087321 1.131489425 -3 -2 -2.5 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 24806206 24806212 - 3R_24806206_24806212_- 0.658999293 0.658999518 0.658999405 1.41E-07 CG5807 FBtr0084739 24805665 24806410 3R - 24806106 24806315 3'utr CG5807 FlyBase G54391.2 TACCAAGTATCGTAACCTTAGTCGTAAGAGCAGTCGCAATACCACCGCTAGTCGCAAGGCAAACGAAATGAACTGTTAAGACACGAGAAAAACATGGGAGATGGGCAGCTGAAACTATATAATATACCTTTACATATGTTATATGATCACGTATAGTTGTGCAGAACTGATACTAATATTTAAATTTTGCAATGTTAACTGTTGTGCTTA 83 24806214 0.912604631 24 76 433 0.91 1.481920138 0.16 0.180722892 0.32 83 7 2 91 3R:24806106-24806315 7 CG5807 FBtr0084739 24805665 24806410 GGCAGCT 7mer-m8 dme-miR-980-3p 3R - 24806189 24806287 3'utr CG5807 FlyBase G41075.1 AGCAGTCGCAATACCACCGCTAGTCGCAAGGCAAACGAAATGAACTGTTAAGACACGAGAAAAACATGGGAGATGGGCAGCTGAAACTATATAATATAC 23 24806214 0.824993052 7 21 65 0.911764706 1.491361694 0.147058824 0.391304348 0.588235294 23 3 0 31 3R:24806189-24806287 7 20.5 3574 FBgn0027539 323.6833333 14.69666667 22.53666667 0.063333505 1.394874121 0.909628753 2 2 2 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 24854437 24854442 + 3R_24854437_24854442_+ 0.999997478 0.999998919 0.999998198 9.90E-07 nct FBtr0301865|FBtr0306087|FBtr0334570|FBtr0084705 24854236|24854089|24854385|24854236 24854869|24854569|24854869|24854569 3R + 24854393 24854498 3'utr nct FlyBase G45585.1 AAAGAATATCTGATCACGTGCCGAAGATGATTGGTTGCTGAATATGATCTAAAACAAAAAACAGACTTAACAAAGACACTAAAATGATATTCTAACTCGTCTTATT 108 24854437 0.979653696 13 104 720 0.96031746 2.08278537 0.03968254 0.148148148 0.26984127 108 5 0 121 3R:24854393-24854498 6 nct FBtr0334570|FBtr0301865|FBtr0306087 24854385|24854236|24854089 24854869|24854869|24854569 TGATCT 6mer3-8 dme-bantam-3p 3R + 24854408 24854502 3'utr nct FlyBase G34380.2 ACGTGCCGAAGATGATTGGTTGCTGAATATGATCTAAAACAAAAAACAGACTTAACAAAGACACTAAAATGATATTCTAACTCGTCTTATTTAAA 81 24854437 0.747772255 16 76 525 0.915254237 1.556302501 0.033898305 0.345679012 0.550847458 81 8 2 108 3R:24854408-24854502 6 77 3575 FBgn0039234 994.94 43.80666667 67.10333333 0.077391602 1.75772333 1.14748398 0 0 0 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 24854785 24854790 + 3R_24854785_24854790_+ 0.999924859 0.999878329 0.999901594 3.30E-05 nct FBtr0301865|FBtr0334570 24854236|24854385 24854869|24854869 3R + 24854647 24854808 3'utr nct FlyBase G45587.1 TAGGATTAACCAACCCAATTGAACCTCTGATAATGCCAAGGAAGAGATGTCTGTACAAATATTGACAAGAAACTGCTATAACTTATAAATCACTGGAAATATTTATACCTTCTGCATCTATTGCGATACTGAACTTAATGATCTGAAATCATTACTTCATAG 112 24854785 0.831493117 26 107 741 0.956834532 1.822821645 0.079136691 0.214285714 0.366906475 112 5 1 133 3R:24854647-24854808 6 nct FBtr0334570|FBtr0301865 24854385|24854236 24854869|24854869 TGATCT 6mer3-8 dme-bantam-3p 3R + 24854755 24854840 3'utr nct FlyBase G34382.1 CTTCTGCATCTATTGCGATACTGAACTTAATGATCTGAAATCATTACTTCATAGAAGACAAATAATTATTATAACGACTTTAAATT 50 24854785 0.976912572 7 49 329 0.973333333 1.86332286 0.053333333 0.4 0.6 50 2 0 73 3R:24854755-24854840 6 51.5 3576 FBgn0039234 994.94 43.80666667 67.10333333 0.051761915 1.175620149 0.767473052 0 0 0 0.1 dme-miR-965-3p 7mer-m8 TACGCTT 3R 24868756 24868762 - 3R_24868756_24868762_- 0.620203135 0.620204811 0.620203973 1.20E-06 CycB3 FBtr0334578 24867932 24868800 3R - 24868585 24868800 3'utr CycB3 FlyBase G54409.1 GACAGCCTCAAAGTTTAGCCAAATTCAACATGATACGATACGCTTCACTTAGGCTCTAAGACGCTTCTATTCCCAATATTAGCCCCATCCCGACGAAACAGCGGATCCCCGCCTTAATCTAAAAACCCCTGATTTTACCCCTTACCTAGTGTTCCCGTCAAGTCCTCGCAATTTATTATATTTTAATTATTATTGTGACCTTCGCATTATTGACAT 260 24868762 0.999926671 28 239 1955 0.919732441 1.594234654 0.163879599 0.130769231 0.244147157 260 18 6 275 3R:24868585-24868800 7 CycB3 FBtr0084728|FBtr0334578 24868354|24867932 24868800|24868800 TACGCTT 7mer-m8 dme-miR-965-3p 3R - 24868631 24868801 stop_codon CycB3 FlyBase G41090.1 GGACAGCCTCAAAGTTTAGCCAAATTCAACATGATACGATACGCTTCACTTAGGCTCTAAGACGCTTCTATTCCCAATATTAGCCCCATCCCGACGAAACAGCGGATCCCCGCCTTAATCTAAAAACCCCTGATTTTACCCCTTACCTAGTGTTCCCGTCAAGTCCTCGCA 106 24868762 0.983092285 20 95 716 0.90797546 1.471291711 0.233128834 0.358490566 0.582822086 106 11 4 148 3R:24868631-24868801 7 122 3577 FBgn0015625 158.3333333 6.95 10.59666667 0.770526316 17.55395683 11.51305442 0 0 0 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3R 24922285 24922290 + 3R_24922285_24922290_+ 0.806580843 0.986591912 0.896586377 0.127287069 CG11168 FBtr0306089|FBtr0084715|FBtr0337009|FBtr0337010 24920050|24922185|24922185|24922185 24922385|24922385|24922385|24922385 3R + 24922272 24922352 3'utr CG11168 FlyBase G45600.1 TTTTACTCATTTGCTAGTCGTTGATGCCATCTCGATGCTGGCTTTGCTCCACATAAGGCAGCTCACATGTTAAGTATTTTG 31 24922283 0.773283678 12 30 262 0.973684211 1.568201724 0.157894737 0.193548387 0.342105263 31 1 0 37 3R:24922272-24922352 6 CG11168 FBtr0337010|FBtr0337009|FBtr0084715|FBtr0306089 24922185|24922185|24922185|24920050 24922385|24922385|24922385|24922385 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3R + 24922269 24922337 3'utr CG11168 FlyBase G34389.1 TTTTTTTACTCATTTGCTAGTCGTTGATGCCATCTCGATGCTGGCTTTGCTCCACATAAGGCAGCTCAC 28 24922282 0.946826023 9 27 216 0.888888889 1.602059991 0.311111111 0.392857143 0.622222222 28 5 0 40 3R:24922269-24922337 6 23.5 3578 FBgn0039249 138.3333333 5.443333333 8.356666667 0.169879518 4.317207593 2.812126047 2 3 2.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 24935214 24935219 - 3R_24935214_24935219_- 0.999999876 0.99999692 0.999998398 2.12E-06 Osbp FBtr0084801 24934867 24935398 3R - 24935195 24935240 3'utr Osbp FlyBase G54445.1 GCATATTGTAGTACCACACTTTGATCTAGAGCATATTTATATATAT 43 24935220 0.715473304 6 42 296 0.962264151 1.707570176 0.132075472 0.209302326 0.358490566 43 2 0 51 3R:24935195-24935240 6 Osbp FBtr0084801 24934867 24935398 TGATCT 6mer3-8 dme-bantam-3p 3R - 24935194 24935279 3'utr Osbp FlyBase G41117.1 AGCGGGACACGCTCCGACTGATTTCGGAGCAGCACATACGCATATTGTAGTACCACACTTTGATCTAGAGCATATTTATATATATA 36 24935220 0.846820347 7 35 210 0.964912281 1.740362689 0.105263158 0.444444444 0.649122807 36 2 0 55 3R:24935194-24935279 6 32 3579 FBgn0020626 533.3433333 19.94666667 30.62 0.059998875 1.604278075 1.045068583 1 1 1 0.1 dme-miR-252-5p 6mer3-8 GTACTT 3R 24939081 24939086 - 3R_24939081_24939086_- 1 0.999999959 0.999999979 0 ssh FBtr0084799|FBtr0301612|FBtr0084800|FBtr0301613 24938708|24939001|24939001|24939001 24939428|24939804|24939428|24939804 3R - 24939010 24939126 3'utr ssh FlyBase G54460.1 GAGGGCAAACAAAACAACCTATGGAAATGAAACTGTATTTGTACTTTTAAATTACTTGTAACTGTATACATATTTATTTTATATTATGCAAGAACTGCCTACGAATAAACGATTTAT 48 24939105 0.982895212 16 45 339 0.925925926 1.698970004 0.074074074 0.125 0.222222222 48 4 0 50 3R:24939010-24939126 6 ssh FBtr0084800|FBtr0301613|FBtr0084799|FBtr0301612 24939001|24939001|24938708|24939001 24939428|24939804|24939428|24939804 GTACTT 6mer3-8 dme-miR-252-5p 3R - 24939006 24939128 3'utr ssh FlyBase G41125.1 GAGAGGGCAAACAAAACAACCTATGGAAATGAAACTGTATTTGTACTTTTAAATTACTTGTAACTGTATACATATTTATTTTATATTATGCAAGAACTGCCTACGAATAAACGATTTATTGTA 30 24939105 0.97558687 11 28 187 0.926829268 1.278753601 0.219512195 0.366666667 0.536585366 30 2 1 38 3R:24939006-24939128 6 11.5 3580 FBgn0029157 492.83 13.26666667 20.39666667 0.023334618 0.866834171 0.563817617 19 19 19 0.1 dme-miR-283-5p 8mer-A1 TGATATTA 3R 24947361 24947368 + 3R_24947361_24947368_+ 0.59184403 0.592175004 0.592009517 0.000234052 Nmnat FBtr0337012|FBtr0084749 24947303|24947303 24947400|24947400 3R + 24947325 24947379 3'utr Nmnat FlyBase G45633.1 ACGCGGATTAAGACAGGGGCGCTGGAAGCTATTTGTTGATATTATATAAATATGC 28 24947357 0.865384915 5 26 212 0.928571429 1.113943352 0.178571429 0 0 28 1 1 26 3R:24947325-24947379 8 Nmnat FBtr0084749|FBtr0337012 24947303|24947303 24947400|24947400 TGATATTA 8mer-A1 dme-miR-283-5p 3R + 24947334 24947375 3'utr Nmnat FlyBase G34407.1 AAGACAGGGGCGCTGGAAGCTATTTGTTGATATTATATAAAT 15 24947357 0.977301319 4 15 133 1 1.322219295 0.142857143 0.333333333 0.523809524 15 0 0 21 3R:24947334-24947375 8 15 3581 FBgn0039254 101.0166667 10.28666667 15.83333333 0.148490348 1.458198315 0.947368421 4 4 4 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3R 25029128 25029134 + 3R_25029128_25029134_+ 0.415173839 0.436747674 0.425960756 0.015255051 Hr96 FBtr0084756 25028997 25029351 3R + 25029108 25029169 3'utr Hr96 FlyBase G45643.1 AATGTTAGATTTTAATCGAATGTGATTGTTAGATTTGCATATACTGCATAGATTTTATATTT 80 25029134 0.731407423 8 78 856 0.978494624 1.658011397 0.182795699 0.15 0.268817204 80 1 1 91 3R:25029108-25029169 7 Hr96 FBtr0084756 25028997 25029351 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 25029071 25029148 3'utr Hr96 FlyBase G34415.1 TTGTTGTTGTTGATGTCTGTTTTATCTTGTCGCTTGTAATGTTAGATTTTAATCGAATGTGATTGTTAGATTTGCATA 62 25029134 0.990784611 12 62 650 1 1.959041392 0.175824176 0.35483871 0.56043956 62 0 0 91 3R:25029071-25029148 7 66.5 3582 FBgn0015240 237.9533333 10.15 15.50666667 0.279466562 6.551724138 4.288478074 -6 -6 -6 0.1 dme-miR-1012-3p 6mer2-7 TGACTA 3R 25029661 25029666 - 3R_25029661_25029666_- 0.999999343 0.999999999 0.999999671 4.95E-07 Smg6 FBtr0084796 25029427 25029778 3R - 25029617 25029708 3'utr Smg6 FlyBase G54482.1 GGAGCGAGCTCGAGCTATTATATTACCTACATTATACATAAATGACTATGTAAGACGGGGTCGGCAGATGCGGACACATACGCTGGCTGCGG 11 25029686 0.968148557 6 10 58 0.846153846 1.041392685 0.461538462 0.181818182 0.307692308 11 2 0 11 3R:25029617-25029708 6 Smg6 FBtr0084796 25029427 25029778 TGACTA 6mer2-7 dme-miR-1012-3p 3R - 25029617 25029696 3'utr Smg6 FlyBase G41140.1 AGCTATTATATTACCTACATTATACATAAATGACTATGTAAGACGGGGTCGGCAGATGCGGACACATACGCTGGCTGCGG 7 25029677 0.988423747 6 6 41 0.9 0.954242509 0.1 0.428571429 0.6 7 1 0 9 3R:25029617-25029696 6 3.5 3583 FBgn0039260 358.6633333 12.99666667 19.73666667 0.009758455 0.26929982 0.17733491 20 11 15.5 0.1 dme-miR-14-3p 8mer-A1 AAGACTGA 3R 25033955 25033962 - 3R_25033955_25033962_- 0.643511554 0.643550432 0.643530993 2.74E-05 CG6422 FBtr0084794 25033874 25034581 3R - 25033944 25033985 3'utr CG6422 FlyBase G54490.1 ATCCAATAATTATACGTTAGTGGAAGACTGAAACAGTATAAT 9 25033966 0.957546438 2 8 46 0.75 0.954242509 0 0.222222222 0.416666667 9 3 0 9 3R:25033944-25033985 8 CG6422 FBtr0084794 25033874 25034581 AAGACTGA 8mer-A1 dme-miR-14-3p 3R - 25033944 25033979 3'utr CG6422 FlyBase G41144.1 TAATTATACGTTAGTGGAAGACTGAAACAGTATAAT 8 25033967 0.933473657 3 7 35 1 1 0.1 0.125 0.3 8 0 0 10 3R:25033944-25033979 8 8 3584 FBgn0039261 1441.73 59.75 92.00666667 0.005548889 0.133891213 0.086950221 4 5 4.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG 3R 25040529 25040535 - 3R_25040529_25040535_- 0.702946224 0.70289518 0.702920702 3.61E-05 5PtaseI FBtr0299660|FBtr0299662 25040425|25040425 25040818|25040600 3R - 25040513 25040542 3'utr 5PtaseI FlyBase G54506.1 GTGTTATGTACCTGTTATGTTAAACGCGTC 18 25040536 0.736106242 4 17 181 0.947368421 1.255272505 0.842105263 0.055555556 0.105263158 18 1 0 18 3R:25040513-25040542 7 5PtaseI FBtr0299662|FBtr0299660 25040425|25040425 25040600|25040818 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 25040511 25040543 3'utr 5PtaseI FlyBase G41157.1 TGTGTTATGTACCTGTTATGTTAAACGCGTCCA 11 25040536 0.870601188 4 11 109 1 1.278753601 0.526315789 0.454545455 0.684210526 11 0 0 19 3R:25040511-25040543 7 14.5 3585 FBgn0259178 182.6666667 9.633333333 14.71333333 0.079379562 1.505190311 0.98550068 1 1 1 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 25041103 25041109 - 3R_25041103_25041109_- 0.661613633 0.661598947 0.66160629 1.04E-05 5PtaseI FBtr0299661 25041064 25041727 3R - 25041089 25041156 3'utr 5PtaseI FlyBase G54507.1 AAACTATTTCTTTGAATCTGTGTTTTAAGTATGTACATTGTTTATTATGTGTTCGTCTTCTTTAAGAA 25 25041109 0.707009066 10 22 307 0.833333333 1.397940009 0.366666667 0.16 0.3 25 5 0 25 3R:25041089-25041156 7 5PtaseI FBtr0299661 25041064 25041727 TGTGTTC 7mer-m8 dme-miR-317-3p 3R - 25041088 25041122 3'utr 5PtaseI FlyBase G41158.1 ACATTGTTTATTATGTGTTCGTCTTCTTTAAGAAA 18 25041111 0.683460874 8 14 224 0.826086957 0.801632346 0.260869565 0.166666667 0.347826087 18 2 2 19 3R:25041088-25041122 7 17 3586 FBgn0259178 182.6666667 9.633333333 14.71333333 0.093065693 1.764705882 1.15541459 0 2 1 0.1 dme-miR-276a-3p 6mer2-7 GTTCCT 3R 25041193 25041198 - 3R_25041193_25041198_- 0.991038933 0.999737765 0.995388349 0.006151051 5PtaseI FBtr0299661 25041064 25041727 3R - 25041171 25041288 3'utr 5PtaseI FlyBase G54508.1 TAAATATGTCGAGCGATTGTAGTTATAATCTTAAACTCATGTGCATTTAAAAGCCATACCGAAATCTCTTATATCCATCTTATGTACCCTGTTCCTTTTCGCAGTGAAAGCGATTCAG 72 25041192 0.936389645 15 71 582 0.988636364 1.939519253 0.079545455 0.180555556 0.329545455 72 1 0 87 3R:25041171-25041288 6 5PtaseI FBtr0299661 25041064 25041727 GTTCCT 6mer2-7 dme-miR-276a-3p 3R - 25041165 25041239 3'utr 5PtaseI FlyBase G41160.1 AAAGCCATACCGAAATCTCTTATATCCATCTTATGTACCCTGTTCCTTTTCGCAGTGAAAGCGATTCAGCCTAAG 32 25041192 0.719074125 8 31 258 1 1.716003344 0.038461538 0.46875 0.673076923 32 0 0 52 3R:25041165-25041239 6 27.5 3587 FBgn0259178 182.6666667 9.633333333 14.71333333 0.150547445 2.85467128 1.869053013 -6 -6 -6 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 3R 25099527 25099533 + 3R_25099527_25099533_+ 0.596087571 0.599821372 0.597954471 0.002640195 CG33096 FBtr0301976|FBtr0301975|FBtr0114464 25099278|25099278|25099278 25099785|25099785|25099785 3R + 25099496 25099546 3'utr CG33096 FlyBase G45704.1 TTTATTCAGCCGCATCAATACATTCGAGAATTGCATTTTTTAAAAGATTAT 6 25099526 0.987448321 2 5 48 1 0.77815125 0.166666667 0 0 6 0 0 6 3R:25099496-25099546 7 CG33096 FBtr0301976|FBtr0114464|FBtr0301975 25099278|25099278|25099278 25099785|25099785|25099785 TGCATTT 7mer-m8 dme-miR-277-3p 3R + 25099491 25099541 3'utr CG33096 FlyBase G34463.1 AATTATTTATTCAGCCGCATCAATACATTCGAGAATTGCATTTTTTAAAAG 8 25099526 0.897773284 3 6 57 0.785714286 1.041392685 0.357142857 0.375 0.642857143 8 3 0 11 3R:25099491-25099541 7 5.5 3588 FBgn0053096 531.5033333 20.77333333 31.74 0.010348007 0.264762516 0.173282924 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 25099598 25099603 + 3R_25099598_25099603_+ 1 1 1 0 CG33096 FBtr0301976|FBtr0301976|FBtr0301976|FBtr0301975|FBtr0301975|FBtr0301975|FBtr0114464|FBtr0114464|FBtr0114464 25099278|25099278|25099278|25099278|25099278|25099278|25099278|25099278|25099278 25099785|25099785|25099785|25099785|25099785|25099785|25099785|25099785|25099785 3R + 25099584 25099626 3'utr CG33096 FlyBase G45705.1 CATTCTTACAGCATTGTGATCCTGGTCCCCGTATTAATTGAAT 22 25099597 0.632671549 7 22 168 1 1.414973348 0.269230769 0.181818182 0.307692308 22 0 0 26 3R:25099584-25099626 6 CG33096 FBtr0301976|FBtr0301976|FBtr0301976|FBtr0114464|FBtr0114464|FBtr0114464|FBtr0301975|FBtr0301975|FBtr0301975 25099278|25099278|25099278|25099278|25099278|25099278|25099278|25099278|25099278 25099785|25099785|25099785|25099785|25099785|25099785|25099785|25099785|25099785 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 25099578 25099631 3'utr CG33096 FlyBase G34464.1 GATCCCCATTCTTACAGCATTGTGATCCTGGTCCCCGTATTAATTGAATAAGCA 21 25099597 0.71950174 5 19 162 0.90625 1.161368002 0.5 0.380952381 0.59375 21 2 1 29 3R:25099578-25099631 6 21 3589 FBgn0053096 531.5033333 20.77333333 31.74 0.039510571 1.010911425 0.661625709 1 1 1 0.1 dme-bantam-3p 6mer2-7 GATCTC 3R 25100329 25100334 + 3R_25100329_25100334_+ 0.995885864 0.999883244 0.997884554 0.002826518 CG33096 FBtr0344621|FBtr0344622 25099278|25099278 25102146|25102146 3R + 25100311 25100348 3'utr CG33096 FlyBase G45708.1 AAAGAGTGGCATCTAACCGATCTCTAAAGGACAGTCAA 67 25100335 0.836178027 4 60 309 0.851851852 1.236789099 0.283950617 0.164179104 0.308641975 67 9 3 69 3R:25100311-25100348 6 CG33096 FBtr0344622|FBtr0344621 25099278|25099278 25102146|25102146 GATCTC 6mer2-7 dme-bantam-3p 3R + 25100310 25100355 3'utr CG33096 FlyBase G34466.1 AAAAGAGTGGCATCTAACCGATCTCTAAAGGACAGTCAAAACGTCT 30 25100335 0.772226681 5 27 139 0.909090909 1 0.431818182 0.366666667 0.568181818 30 1 3 40 3R:25100310-25100355 6 47.5 3590 FBgn0053096 531.5033333 20.77333333 31.74 0.089369148 2.286585366 1.496534342 -6 -6 -6 0.1 dme-miR-252-5p 7mer-m8 GTACTTA 3R 25101706 25101712 + 3R_25101706_25101712_+ 0.585502523 0.582405956 0.583954239 0.002189556 CG33096 FBtr0344621|FBtr0344622 25099278|25099278 25102146|25102146 3R + 25101701 25101730 3'utr CG33096 FlyBase G45709.1 TACGAGTACTTATAAGCCTGATCCACTTTT 11 25101713 0.746617979 2 11 63 1 1.176091259 0 0.272727273 0.466666667 11 0 0 15 3R:25101701-25101730 7 CG33096 FBtr0344622|FBtr0344621 25099278|25099278 25102146|25102146 GTACTTA 7mer-m8 dme-miR-252-5p 3R + 25101702 25101731 3'utr CG33096 FlyBase G34467.1 ACGAGTACTTATAAGCCTGATCCACTTTTA 7 25101713 0.748781915 2 7 42 1 1.041392685 0 0.428571429 0.636363636 7 0 0 11 3R:25101702-25101731 7 9 3591 FBgn0053096 531.5033333 20.77333333 31.74 0.016933102 0.433247754 0.283553875 -7 -7 -7 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 25101960 25101967 + 3R_25101960_25101967_+ 0.625364215 0.625364241 0.625364228 0 CG33095 FBtr0100204|FBtr0084774 25101745|25101745 25102146|25102146 3R + 25101921 25101979 3'utr CG33095 FlyBase G45710.1 TTTAGTAGTACCTTAAGTTTGAAATTTTTACAGTGATTTTGCATTTATATTAAGTAACA 34 25101959 0.991963354 7 34 383 1 1.633468456 0.046511628 0.264705882 0.418604651 34 0 0 43 3R:25101921-25101979 8 CG33095 FBtr0084774|FBtr0100204 25101745|25101745 25102146|25102146 TGCATTTA 8mer-A1 dme-miR-277-3p 3R + 25101935 25101978 3'utr CG33095 FlyBase G34468.1 AAGTTTGAAATTTTTACAGTGATTTTGCATTTATATTAAGTAAC 29 25101959 0.716080602 6 28 311 0.97826087 1.653212514 0.043478261 0.310344828 0.565217391 29 1 0 45 3R:25101935-25101978 8 31 3592 FBgn0053095 476.96 16.58 25.46 0.064994968 1.869722557 1.217596229 1 1 1 0.1 dme-miR-932-5p 6mer2-7 GAATTG 3R 25233718 25233723 - 3R_25233718_25233723_- 0.998811874 0.998479413 0.998645643 0.000235113 CG10420 FBtr0084870 25233634 25234044 3R - 25233701 25233735 3'utr CG10420 FlyBase G54596.1 TTGTATGCTACAGAATTGTTCTCCAAACAGATTAT 40 25233720 0.77147291 3 39 241 0.983050847 1.462397998 0.271186441 0.35 0.559322034 40 0 1 58 3R:25233701-25233735 6 CG10420 FBtr0084870 25233634 25234044 GAATTG 6mer2-7 dme-miR-932-5p 3R - 25233703 25233735 3'utr CG10420 FlyBase G41213.1 TTGTATGCTACAGAATTGTTCTCCAAACAGATT 18 25233720 0.786524585 2 18 120 1 1.397940009 0.28 0.333333333 0.52 18 0 0 25 3R:25233703-25233735 6 29 3593 FBgn0039296 113.6666667 7.593333333 11.63333333 0.255131965 3.819139596 2.492836676 -3 -3 -3 0.1 dme-miR-11-3p 7mer-m1 TGTGATG 3R 25233928 25233934 - 3R_25233928_25233934_- 0.605803469 0.608572567 0.607188018 0.001958049 CG10420 FBtr0084870 25233634 25234044 3R - 25233811 25233994 3'utr CG10420 FlyBase G54597.1 TGAGTTGGAATGAAATTCGCAGCCAAACCATAGAATACGATAGCTAAGATGCCAAGTACTTGTGATGCAAAAATAATGCTCTTTGTCATTAACTTAGGATAGCAATCAATCATGCCAAACATCTACAGGATTTTCGTTATCAAATATAGTCTCTTACTTAAGATTATTTTAAGTGTGATTTTTT 198 25233935 0.876666322 33 186 1262 0.918803419 1.429348473 0.179487179 0.136363636 0.269230769 198 12 7 215 3R:25233811-25233994 7 CG10420 FBtr0084870 25233634 25234044 TGTGATG 7mer-m1 dme-miR-11-3p 3R - 25233820 25233996 3'utr CG10420 FlyBase G41214.1 GCTGAGTTGGAATGAAATTCGCAGCCAAACCATAGAATACGATAGCTAAGATGCCAAGTACTTGTGATGCAAAAATAATGCTCTTTGTCATTAACTTAGGATAGCAATCAATCATGCCAAACATCTACAGGATTTTCGTTATCAAATATAGTCTCTTACTTAAGATTATTTTAAGTG 124 25233935 0.93320124 19 113 751 0.944723618 1.496006599 0.190954774 0.427419355 0.64321608 124 6 5 188 3R:25233820-25233996 7 116.5 3594 FBgn0039296 113.6666667 7.593333333 11.63333333 1.024926686 15.34240562 10.01432665 1 1 1 0.1 dme-miR-263a-5p 7mer-m1 TGCCATT 3R 25260204 25260210 + 3R_25260204_25260210_+ 0.749506372 0.761811878 0.755659125 0.008701302 CG11857 FBtr0084814 25260035 25260759 3R + 25260136 25260287 3'utr CG11857 FlyBase G45795.1 AGCGACAGCGCAGCGACCAAGGATGTGGGGTCGCCAACAGCATCGTCCATCAAACCACCGCAGATCATTGCCATTGAGGACTACTAGAGAAAGCTACCGAAAGCAGCCCGGAATGGGAACCAGCAGCATAACATCAACCAGAAACAAGCTTA 74 25260210 0.967310802 11 74 389 1 1.908485019 0.308641975 0.094594595 0.172839506 74 0 0 81 3R:25260136-25260287 7 CG11857 FBtr0084814 25260035 25260759 TGCCATT 7mer-m1 dme-miR-263a-5p 3R + 25260160 25260225 3'utr CG11857 FlyBase G34545.1 GTGGGGTCGCCAACAGCATCGTCCATCAAACCACCGCAGATCATTGCCATTGAGGACTACTAGAGA 20 25260210 0.968648981 4 19 105 0.966666667 1.462397998 0.2 0.4 0.6 20 1 0 29 3R:25260160-25260225 7 42.5 3595 FBgn0039303 1484.506667 100.39 153.7466667 0.02862904 0.423348939 0.276428757 -6 -6 -6 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 25260357 25260362 + 3R_25260357_25260362_+ 1 0.999999676 0.999999838 2.12E-07 CG11857 FBtr0084814 25260035 25260759 3R + 25260330 25260401 3'utr CG11857 FlyBase G45796.1 CACTGTTGAGTTGTCGTACGGCGTCTTGTGCAAAATACCTTGTTTATTGTTTAATCTAACTGCTTGTTTAAA 30 25260356 0.899577833 12 29 245 1 1.556302501 0.055555556 0.133333333 0.277777778 30 0 0 36 3R:25260330-25260401 6 CG11857 FBtr0084814 25260035 25260759 GTGCAA 6mer3-8 dme-miR-92b-3p 3R + 25260329 25260403 3'utr CG11857 FlyBase G34546.1 TCACTGTTGAGTTGTCGTACGGCGTCTTGTGCAAAATACCTTGTTTATTGTTTAATCTAACTGCTTGTTTAAATT 35 25260355 0.738979637 11 29 279 0.795918367 1.290034611 0.020408163 0.285714286 0.489795918 35 9 1 39 3R:25260329-25260403 6 25.5 3596 FBgn0039303 1484.506667 100.39 153.7466667 0.017177424 0.254009363 0.165857254 1 2 1.5 0.1 dme-miR-12-5p 6mer3-8 AATACT 3R 25260455 25260460 + 3R_25260455_25260460_+ 1 1 1 0 CG11857 FBtr0084814 25260035 25260759 3R + 25260424 25260488 3'utr CG11857 FlyBase G45797.1 TCTATCTATTGTAAATCCCAAACGATACCGAAATACTGCAGATCAGCTCTAATTTAGTTTTTCAT 35 25260449 0.923555346 7 33 215 0.952380952 1.602059991 0.166666667 0.171428571 0.30952381 35 2 0 40 3R:25260424-25260488 6 CG11857 FBtr0084814 25260035 25260759 AATACT 6mer3-8 dme-miR-12-5p 3R + 25260434 25260489 3'utr CG11857 FlyBase G34547.1 GTAAATCCCAAACGATACCGAAATACTGCAGATCAGCTCTAATTTAGTTTTTCATC 17 25260457 0.70451467 5 16 85 0.958333333 1.361727836 0.041666667 0.352941176 0.541666667 17 1 0 23 3R:25260434-25260489 6 23.5 3597 FBgn0039303 1484.506667 100.39 153.7466667 0.015830175 0.23408706 0.152848842 6 -2 2 0.1 dme-miR-932-5p 7mer-A1 GAATTGA 3R 25260689 25260695 + 3R_25260689_25260695_+ 0.7311574 0.731014855 0.731086128 0.000100763 CG11857 FBtr0084814 25260035 25260759 3R + 25260676 25260710 3'utr CG11857 FlyBase G45799.1 GTTAAAAAAAGGCGAATTGAAAACTGAAACTATAG 23 25260693 0.944898103 3 18 51 0.962962963 1.414973348 0.074074074 0.173913043 0.296296296 23 1 0 26 3R:25260676-25260710 7 CG11857 FBtr0084814 25260035 25260759 GAATTGA 7mer-A1 dme-miR-932-5p 3R + 25260678 25260733 3'utr CG11857 FlyBase G34549.1 TAAAAAAAGGCGAATTGAAAACTGAAACTATAGGAAGTGTACACTGGGTGCGTCTT 29 25260693 0.945472052 6 27 123 0.901960784 1.662757832 0.058823529 0.517241379 0.725490196 29 5 0 46 3R:25260678-25260733 7 16.5 3598 FBgn0039303 1484.506667 100.39 153.7466667 0.011114804 0.164359 0.1073194 -4 -4 -4 0.1 dme-miR-8-3p 6mer2-7 AGTATT 3R 25261224 25261229 - 3R_25261224_25261229_- 1 1 1 0 CG10425 FBtr0084867 25260961 25261255 3R - 25261203 25261247 3'utr CG10425 FlyBase G54611.1 TTGTCCCGCTGCCCTTAAAGTATTCCCAAGTGCCCATAATTAAAT 13 25261226 0.620116571 7 12 86 0.923076923 1.079181246 0.076923077 0 0 13 1 0 12 3R:25261203-25261247 6 CG10425 FBtr0084867 25260961 25261255 AGTATT 6mer2-7 dme-miR-8-3p 3R - 25261202 25261269 stop_codon CG10425 FlyBase G41225.1 TGGAGTCCAAGTGAAATCTCTCTTGTCCCGCTGCCCTTAAAGTATTCCCAAGTGCCCATAATTAAATC 12 25261225 0.984016065 5 10 76 0.851851852 1.361727836 0.407407407 0.833333333 0.925925926 12 4 0 23 3R:25261202-25261269 6 11 3599 FBgn0039304 196.3333333 17.07333333 25.98666667 0.056027165 0.644279578 0.423293997 -3 -4 -3.5 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 25303944 25303951 + 3R_25303944_25303951_+ 0.500118244 0.50011756 0.500117902 4.24E-07 CG31370 FBtr0290055 25303865 25303986 3R + 25303926 25303984 3'utr CG31370 FlyBase G45812.1 ATGAGCGTTCCATTATATGTACTTAATAAAGTGTATAAGGCTATTGTTTTGATATCGCT 20 25303943 0.933594614 3 17 182 0.88 1.041392685 0.32 0.25 0.4 20 2 1 22 3R:25303926-25303984 8 CG31370 FBtr0290055 25303865 25303986 GTACTTAA 8mer-A1 dme-miR-252-5p 3R + 25303927 25303973 3'utr CG31370 FlyBase G34556.1 TGAGCGTTCCATTATATGTACTTAATAAAGTGTATAAGGCTATTGTT 18 25303943 0.765026138 3 17 153 0.914285714 1.505149978 0.314285714 0.555555556 0.771428571 18 3 0 32 3R:25303927-25303973 8 15.5 3600 FBgn0051370 220 19.25 29.63 0.070454545 0.805194805 0.523118461 1 1 1 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3R 25331532 25331538 - 3R_25331532_25331538_- 0.521207699 0.521211992 0.521209845 3.04E-06 CG10669 FBtr0300687 25331361 25331774 3R - 25331507 25331559 3'utr CG10669 FlyBase G54646.1 TAATAAATTAAAACAATACTGTGTGATTAAAAGGGGAATAGTTTGTAGTTTGT 29 25331540 0.722624947 6 27 190 0.939393939 1.491361694 0.090909091 0.137931034 0.242424242 29 2 0 31 3R:25331507-25331559 7 CG10669 FBtr0300687 25331361 25331774 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 25331508 25331556 3'utr CG10669 FlyBase G41251.1 TAAATTAAAACAATACTGTGTGATTAAAAGGGGAATAGTTTGTAGTTTG 19 25331540 0.972831485 4 16 140 0.791666667 1.278753601 0.083333333 0.263157895 0.416666667 19 5 0 19 3R:25331508-25331556 7 22.5 3601 FBgn0039329 90.66666667 3.293333333 4.993333333 0.248161765 6.831983806 4.506008011 2 2 2 0.1 dme-miR-988-3p 7mer-m8 ACAAGGG 3R 25340067 25340073 + 3R_25340067_25340073_+ 0.671796058 0.671774168 0.671785113 1.55E-05 CG11902 FBtr0300735 25339910 25340088 3R + 25340055 25340087 3'utr CG11902 FlyBase G45830.1 AAAAATAAAATTACAAGGGTTACAAATAAACGA 12 25340074 0.758450375 2 12 50 1 1.176091259 0 0.166666667 0.333333333 12 0 0 15 3R:25340055-25340087 7 CG11902 FBtr0300735 25339910 25340088 ACAAGGG 7mer-m8 dme-miR-988-3p 3R + 25340044 25340084 3'utr CG11902 FlyBase G34568.1 AATGTAAAGATAAAAATAAAATTACAAGGGTTACAAATAAA 18 25340074 0.946825159 2 18 78 1 1.361727836 0 0.222222222 0.391304348 18 0 0 23 3R:25340044-25340084 7 15 3602 FBgn0028647 178 4.693333333 7.203333333 0.084269663 3.196022727 2.082369273 -7 -7 -7 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3R 25350214 25350220 - 3R_25350214_25350220_- 0.521223855 0.517336198 0.519280026 0.002749019 Fur1 FBtr0336805 25349196 25352006 3R - 25350200 25350283 3'utr Fur1 FlyBase G54658.1 TCGGAACTAAGTACAAACTATTAGTTTACTTAACAAATTCTATACAAAATTACTTATCTCCTTTGTGATTTATATTTCTATTTT 34 25350214 0.992554955 10 33 383 0.976744186 1.62324929 0 0.264705882 0.418604651 34 1 0 42 3R:25350200-25350283 7 Fur1 FBtr0336805 25349196 25352006 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 25350200 25350232 3'utr Fur1 FlyBase G41258.2 ACTTATCTCCTTTGTGATTTATATTTCTATTTT 13 25350214 0.746988941 2 12 157 0.95 1.278753601 0 0.461538462 0.65 13 1 0 19 3R:25350200-25350232 7 21 3603 FBgn0004509 573.7666667 14.10666667 21.43 0.036600244 1.488657845 0.979934671 -6 -6 -6 0.1 dme-miR-14-3p 7mer-m8 AAGACTG 3R 25350907 25350913 - 3R_25350907_25350913_- 0.671741225 0.670603297 0.671172261 0.000804617 Fur1 FBtr0336805 25349196 25352006 3R - 25350890 25350933 3'utr Fur1 FlyBase G54659.1 CAGTTTAGAGTTCATAGTAAAAGACTGTTTCTTAAAATTAAAAC 8 25350905 0.841280557 6 8 67 1 0.903089987 0.125 0 0 8 0 0 8 3R:25350890-25350933 7 Fur1 FBtr0336805 25349196 25352006 AAGACTG 7mer-m8 dme-miR-14-3p 3R - 25350888 25350934 3'utr Fur1 FlyBase G41260.1 GCAGTTTAGAGTTCATAGTAAAAGACTGTTTCTTAAAATTAAAACCA 6 25350905 0.701270268 4 6 59 1 1 0.3 0.333333333 0.6 6 0 0 10 3R:25350888-25350934 7 6.5 3604 FBgn0004509 573.7666667 14.10666667 21.43 0.011328647 0.460775047 0.303313112 -8 -8 -8 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 25486395 25486401 - 3R_25486395_25486401_- 0.651073931 0.658483404 0.654778668 0.005239308 Dhap-at FBtr0084897|FBtr0330374 25485616|25485616 25486603|25486603 3R - 25486306 25486425 3'utr Dhap-at FlyBase G54700.1 TCATCGTGGTGTTGTCGCCGCTGTGGCAGCTGCTCCACTGGATCATCGTATCCACCCACTCATTCACGTAGGTTAACGGGGTGTCTGGTTAGGATGGGTCGATACTAATAGTATCCTATT 16 25486402 0.982202586 6 14 111 0.857142857 0.954242509 0.047619048 0.25 0.428571429 16 2 1 18 3R:25486306-25486425 7 Dhap-at FBtr0330374|FBtr0084897 25485616|25485616 25486603|25486603 GGCAGCT 7mer-m8 dme-miR-980-3p 3R - 25486343 25486423 3'utr Dhap-at FlyBase G41290.1 ATCGTGGTGTTGTCGCCGCTGTGGCAGCTGCTCCACTGGATCATCGTATCCACCCACTCATTCACGTAGGTTAACGGGGTG 14 25486402 0.972233932 6 14 85 1 1.176091259 0.133333333 0.071428571 0.133333333 14 0 0 15 3R:25486343-25486423 7 10.5 3605 FBgn0040212 241.5966667 8.49 13.08666667 0.043460865 1.236749117 0.802343352 1 1 1 0.1 dme-miR-14-3p 7mer-m8 AAGACTG 3R 25493192 25493198 + 3R_25493192_25493198_+ 0.670965645 0.67086881 0.670917228 6.84E-05 CG5112 FBtr0084878 25493128 25493262 3R + 25493133 25493204 3'utr CG5112 FlyBase G45851.1 GTTTATGATGTATGATCGATCAACTTATTGTTAGAGAACATAGGGTGTGGGTAACGCTGAAGACTGTCGCTT 33 25493190 0.970304922 10 30 174 0.918918919 1.531478917 0.378378378 0.090909091 0.189189189 33 3 0 34 3R:25493133-25493204 7 CG5112 FBtr0084878 25493128 25493262 AAGACTG 7mer-m8 dme-miR-14-3p 3R + 25493136 25493204 3'utr CG5112 FlyBase G34581.1 TATGATGTATGATCGATCAACTTATTGTTAGAGAACATAGGGTGTGGGTAACGCTGAAGACTGTCGCTT 30 25493190 0.966748859 10 30 163 1 1.602059991 0.25 0.3 0.475 30 0 0 40 3R:25493136-25493204 7 25 3606 FBgn0039341 334.3133333 22.37333333 33.99666667 0.074780146 1.117401669 0.735366212 2 2 2 0.1 dme-miR-304-5p 8mer-A1 TGAGATTA 3R 25493955 25493962 - 3R_25493955_25493962_- 0.62536326 0.625363291 0.625363275 0 CG33494 FBtr0089607|FBtr0336802 25493577|25493479 25494014|25494014 3R - 25493909 25494021 stop_codon CG33494 FlyBase G54708.1 TGGGTAACCAGTTCCAAAGTCCACTTAGTCTTTGCTCTCGAATCGGTCATCCAAGCCTTTGAGATTACATTTAAATATGTCATGAAATACATAGCATGATATACATACATATA 64 25493963 0.9826232 14 60 522 0.930555556 1.826074803 0.125 0.109375 0.208333333 64 5 0 67 3R:25493909-25494021 8 CG33494 FBtr0336802|FBtr0089607 25493479|25493577 25494014|25494014 TGAGATTA 8mer-A1 dme-miR-304-5p 3R - 25493947 25494006 3'utr CG33494 FlyBase G41296.1 AAAGTCCACTTAGTCTTTGCTCTCGAATCGGTCATCCAAGCCTTTGAGATTACATTTAAA 25 25493963 0.763605717 8 22 199 0.921052632 1.243038049 0.131578947 0.4 0.605263158 25 2 1 35 3R:25493947-25494006 8 32 3607 FBgn0053494 1664.706667 279.3966667 423.6866667 0.019222606 0.114532505 0.075527512 1 1 1 0.1 dme-miR-8-3p 7mer-A1 AGTATTA 3R 25600961 25600967 + 3R_25600961_25600967_+ 0.823349508 0.823348885 0.823349197 4.24E-07 msi FBtr0305219|FBtr0333664|FBtr0084881|FBtr0333665|FBtr0084882|FBtr0333663|FBtr0305218 25600746|25600746|25600746|25600746|25600746|25600746|25600746 25601136|25608423|25601136|25601136|25602421|25601136|25601136 3R + 25600901 25600982 5'utr msi FlyBase G45863.1 GAAGTTGGTTTTCCTTTGAGTTTGGCTAAGTTAGTAGTCCGATACACGGAAGGCAAATTAAGTATTATATTTAAGGCGCCCT 20 25600958 0.916346268 9 19 162 0.956521739 1.342422681 0.304347826 0.15 0.260869565 20 1 0 22 3R:25600901-25600982 7 msi FBtr0333663|FBtr0305218|FBtr0084882|FBtr0084881|FBtr0333665|FBtr0305219|FBtr0333664 25600746|25600746|25600746|25600746|25600746|25600746|25600746 25601136|25601136|25602421|25601136|25601136|25601136|25608423 AGTATTA 7mer-A1 dme-miR-8-3p 3R + 25600914 25600972 5'utr msi FlyBase G34587.1 CTTTGAGTTTGGCTAAGTTAGTAGTCCGATACACGGAAGGCAAATTAAGTATTATATTT 7 25600958 0.899608728 6 7 52 1 1.113943352 0.076923077 0.571428571 0.769230769 7 0 0 13 3R:25600914-25600972 7 7 3608 FBgn0011666 1019.796667 32.88 50.09666667 0.006864113 0.212895377 0.139729856 3 3 3 0.1 dme-miR-988-3p 6mer2-7 CAAGGG 3R 25601441 25601446 + 3R_25601441_25601446_+ 0.942199502 0.99977424 0.970986871 0.040711461 msi FBtr0333664|FBtr0084882 25600746|25600746 25608423|25602421 3R + 25601401 25601460 3'utr msi FlyBase G45867.1 TGGAGCCCTAAACTCAGCTGAAATGAATGAGAAACTCCTGCAAGGGCAGTATTAATTAAT 31 25601437 0.973190069 8 27 166 0.875 1.447158031 0 0.032258065 0.0625 31 4 0 28 3R:25601401-25601460 6 msi FBtr0084882|FBtr0333664 25600746|25600746 25602421|25608423 CAAGGG 6mer2-7 dme-miR-988-3p 3R + 25601412 25601469 3'utr msi FlyBase G34589.1 ACTCAGCTGAAATGAATGAGAAACTCCTGCAAGGGCAGTATTAATTAATTGAATGAAA 19 25601436 0.853622635 7 16 111 0.791666667 1.278753601 0 0.263157895 0.416666667 19 5 0 19 3R:25601412-25601469 6 23 3609 FBgn0011666 1019.796667 32.88 50.09666667 0.022553516 0.699513382 0.459112383 4 5 4.5 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 25601698 25601705 + 3R_25601698_25601705_+ 0.500120277 0.500120307 0.500120292 0 msi FBtr0333664|FBtr0084882 25600746|25600746 25608423|25602421 3R + 25601676 25601729 3'utr msi FlyBase G45869.1 CTATCTACCCAAATCTGTTATTGTACTTAATTATATAACAATTACAAATACCAC 38 25601697 0.760864444 5 38 424 1 1.681241237 0.020833333 0.184210526 0.354166667 38 0 0 48 3R:25601676-25601729 8 msi FBtr0084882|FBtr0333664 25600746|25600746 25602421|25608423 GTACTTAA 8mer-A1 dme-miR-252-5p 3R + 25601668 25601720 3'utr msi FlyBase G34590.1 CCTACCTTCTATCTACCCAAATCTGTTATTGTACTTAATTATATAACAATTAC 24 25601697 0.956187348 5 24 260 1 1.579783597 0 0.375 0.605263158 24 0 0 38 3R:25601668-25601720 8 30 3610 FBgn0011666 1019.796667 32.88 50.09666667 0.029417629 0.912408759 0.598842238 1 1 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 3R 25602762 25602769 + 3R_25602762_25602769_+ 0.643564893 0.643562592 0.643563743 1.63E-06 msi FBtr0333664 25600746 25608423 3R + 25602742 25602788 3'utr msi FlyBase G45874.1 AATGTAATATTGTTTCGTATACCAAAGATAACGCATATTAACCCAAA 71 25602761 0.877322409 4 64 465 0.913043478 1.924279286 0.163043478 0.197183099 0.380434783 71 8 0 84 3R:25602742-25602788 8 msi FBtr0333664 25600746 25608423 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 25602721 25602784 3'utr msi FlyBase G34593.1 TTCGACTCGGGGGGTGAGTATAATGTAATATTGTTTCGTATACCAAAGATAACGCATATTAACC 54 25602761 0.977073429 4 51 335 0.933333333 1.84509804 0.173333333 0.277777778 0.48 54 5 0 70 3R:25602721-25602784 8 61.5 3611 FBgn0011666 1019.796667 32.88 50.09666667 0.060306139 1.870437956 1.227626589 1 1 1 0.1 dme-miR-263a-5p 8mer-m1 GTGCCATT 3R 25602908 25602915 + 3R_25602908_25602915_+ 0.540224444 0.390341197 0.465282821 0.105983427 msi FBtr0333664 25600746 25608423 3R + 25602803 25602924 3'utr msi FlyBase G45875.1 GCTGGGCCTAAGTCGAGGCTCAAATACCACATCTCCATTTGCAGAAACTAATTTATTTATTTATTATTTACGCTTAAGAATCTAACACATTCCAGACATGCTATGGTGCCATTTACTTATCC 35 25602906 0.951635923 12 34 266 0.976190476 1.612783857 0.023809524 0.171428571 0.30952381 35 1 0 41 3R:25602803-25602924 8 msi FBtr0333664 25600746 25608423 GTGCCATT 8mer-m1 dme-miR-263a-5p 3R + 25602857 25602916 3'utr msi FlyBase G34594.1 ATTTATTTATTATTTACGCTTAAGAATCTAACACATTCCAGACATGCTATGGTGCCATTT 19 25602906 0.715734264 6 19 127 1 1.431363764 0 0.315789474 0.518518519 19 0 0 27 3R:25602857-25602916 8 16 3612 FBgn0011666 1019.796667 32.88 50.09666667 0.015689402 0.486618005 0.319382527 2 2 2 0.1 dme-bantam-3p 6mer2-7 GATCTC 3R 25602961 25602966 + 3R_25602961_25602966_+ 0.85071798 0.95709497 0.903906475 0.075219898 msi FBtr0333664 25600746 25608423 3R + 25602943 25603021 3'utr msi FlyBase G45876.1 TTTTTAACTCGTCTGTCAGATCTCGATCTCAGAACAATTGCTTTTAGCATAAGGTTGATTTTACCCTGCCAATCCAAGA 46 25602964 0.780918125 10 41 292 0.903225806 1.748188027 0.016129032 0.282608696 0.467741935 46 6 0 56 3R:25602943-25603021 6 msi FBtr0333664 25600746 25608423 GATCTC 6mer2-7 dme-bantam-3p 3R + 25602947 25602999 3'utr msi FlyBase G34595.1 TAACTCGTCTGTCAGATCTCGATCTCAGAACAATTGCTTTTAGCATAAGGTTG 30 25602964 0.660960243 11 28 194 0.921052632 1.06694679 0.210526316 0.233333333 0.394736842 30 1 2 35 3R:25602947-25602999 6 32 3613 FBgn0011666 1019.796667 32.88 50.09666667 0.031378804 0.97323601 0.638765054 -3 -3 -3 0.1 dme-miR-283-5p 6mer3-8 TGATAT 3R 25604378 25604383 + 3R_25604378_25604383_+ 0.543306524 0.927248716 0.73527762 0.271488133 msi FBtr0333664 25600746 25608423 3R + 25604344 25604397 3'utr msi FlyBase G45877.1 GATAGAACATATACGATGATATTTAGCAAGACCGTGATATATTCAATTAGTAAA 12 25604384 0.980677403 7 11 76 0.923076923 0.77815125 0.230769231 0.083333333 0.153846154 12 0 1 12 3R:25604344-25604397 6 msi FBtr0333664 25600746 25608423 TGATAT 6mer3-8 dme-miR-283-5p 3R + 25604362 25604396 3'utr msi FlyBase G34596.1 ATATTTAGCAAGACCGTGATATATTCAATTAGTAA 7 25604384 0.824798869 4 7 48 1 1.079181246 0 0.571428571 0.75 7 0 0 12 3R:25604362-25604396 6 8 3614 FBgn0011666 1019.796667 32.88 50.09666667 0.007844701 0.243309002 0.159691264 -6 -6 -6 0.1 dme-miR-33-5p 6mer2-7 AATGCA 3R 25653206 25653211 - 3R_25653206_25653211_- 0.786979711 0.629870519 0.708425115 0.111092981 Tnks FBtr0330383|FBtr0084890 25653089|25653089 25653514|25654531 3R - 25653198 25653236 3'utr Tnks FlyBase G54731.1 CGAGGTTACAAGTTCTTTGCCGATGAATGCATTACATTA 9 25653213 0.968433525 5 8 64 0.888888889 0.903089987 0 0 0 9 1 0 8 3R:25653198-25653236 6 Tnks FBtr0330383|FBtr0084890 25653089|25653089 25653514|25654531 AATGCA 6mer2-7 dme-miR-33-5p 3R - 25653198 25653241 3'utr Tnks FlyBase G41316.1 TTATACGAGGTTACAAGTTCTTTGCCGATGAATGCATTACATTA 8 25653205 0.866970566 4 8 62 1 1.146128036 0.071428571 0.375 0.642857143 8 0 0 14 3R:25653198-25653241 6 7 3615 FBgn0027508 387.6333333 8.48 12.93666667 0.018058303 0.825471698 0.541097655 2 -6 -2 0.1 dme-miR-995-5p 6mer3-8 AATTCG 3R 25653264 25653269 - 3R_25653264_25653269_- 0.820490848 0.773022461 0.796756654 0.033565157 Tnks FBtr0330383|FBtr0084890 25653089|25653089 25653514|25654531 3R - 25653267 25653295 3'utr Tnks FlyBase G54732.1 GTGAAGCACAGTTTTTGAGTGATTTTAAT 9 25653281 0.588780865 4 9 84 1 1.041392685 0.181818182 0.222222222 0.363636364 9 0 0 11 3R:25653267-25653295 2 Tnks FBtr0330383|FBtr0084890 25653089|25653089 25653514|25654531 AATTCG 6mer3-8 dme-miR-995-5p 3R - 25653268 25653299 3'utr Tnks FlyBase G41317.1 AAAAGTGAAGCACAGTTTTTGAGTGATTTTAA 5 25653280 0.986498043 3 5 45 1 0.903089987 0 0.4 0.625 5 0 0 8 3R:25653268-25653299 1 3 3616 FBgn0027508 387.6333333 8.48 12.93666667 0.007739273 0.353773585 0.231898995 12 11 11.5 0.1 dme-bantam-3p 7mer-m8 TGATCTC 3R 25653482 25653488 - 3R_25653482_25653488_- 0.661615243 0.661615243 0.661615243 0 Tnks FBtr0330383|FBtr0084890 25653089|25653089 25653514|25654531 3R - 25653430 25653522 stop_codon Tnks FlyBase G54733.1 AGTTGTGACGGTGGTACGACATGCTGGTGGTTATTGATCTCTATGTCTCCGTTGGCCTCCCGTCTATTTTATTACAATTACTAGCTATAGATG 352 25653489 0.713909296 21 327 3618 0.926108374 2.274157849 0.201970443 0.136363636 0.251231527 352 29 1 376 3R:25653430-25653522 7 Tnks FBtr0330383|FBtr0084890 25653089|25653089 25653514|25654531 TGATCTC 7mer-m8 dme-bantam-3p 3R - 25653448 25653518 stop_codon Tnks FlyBase G41319.1 GTGACGGTGGTACGACATGCTGGTGGTTATTGATCTCTATGTCTCCGTTGGCCTCCCGTCTATTTTATTAC 233 25653489 0.663587543 15 213 2298 0.933884298 1.928139707 0.201101928 0.407725322 0.619834711 233 21 3 339 3R:25653448-25653518 7 262.5 3617 FBgn0027508 387.6333333 8.48 12.93666667 0.677186344 30.95518868 20.29116207 1 1 1 0.1 dme-miR-33-5p 6mer3-8 CAATGC 3R 25653600 25653605 - 3R_25653600_25653605_- 0.990507234 0.999987217 0.995247225 0.006703372 Tnks FBtr0084890 25653089 25654531 3R - 25653553 25653675 3'utr Tnks FlyBase G54734.1 GAGCCGGGCACGGGAATGCTCCGTACAGCAGCTCGCTGCAACATCATCGACTAAGACGCTGTTCGTCGTACAATGCGGAGAATGCCTACGAGCACTTTGCGGCCCCCTTCAAGGCGCGCAAGA 12 25653593 0.943599686 8 11 45 1 1.041392685 0.272727273 0 0 11 0 0 11 3R:25653553-25653675 6 Tnks FBtr0084890 25653089 25654531 CAATGC 6mer3-8 dme-miR-33-5p 3R - 25653567 25653623 3'utr Tnks FlyBase G41320.1 AAGACGCTGTTCGTCGTACAATGCGGAGAATGCCTACGAGCACTTTGCGGCCCCCTT 8 25653593 0.950260607 3 6 28 0.818181818 0.954242509 0 0.25 0.454545455 8 2 0 9 3R:25653567-25653623 6 5 3618 FBgn0027508 387.6333333 8.48 12.93666667 0.012898788 0.589622642 0.386498325 -12 -12 -12 0.1 dme-bantam-3p 6mer2-7 GATCTC 3R 25664877 25664882 + 3R_25664877_25664882_+ 0.999542242 0.999851251 0.999696747 0.000218567 RASSF8 FBtr0084898 25664654 25665640 3R + 25664850 25664976 3'utr RASSF8 FlyBase G45891.1 ATGTTTACATTCCAATCACACTCTATGGATCTCTCAATGCAATGATATATGTTACAAATTTGAAATCACAATCGTTTTATTACTCTACATTCCGCACTGTACTTTGTATTTAATAGTAGTTAATGAG 460 25664873 0.731628957 19 451 3253 0.981718464 2.42894429 0.219378428 0.169565217 0.301645338 460 9 1 537 3R:25664850-25664976 6 RASSF8 FBtr0084898 25664654 25665640 GATCTC 6mer2-7 dme-bantam-3p 3R + 25664855 25664912 3'utr RASSF8 FlyBase G34608.1 TACATTCCAATCACACTCTATGGATCTCTCAATGCAATGATATATGTTACAAATTTGA 266 25664873 0.733875348 8 259 1826 0.9825 2.117271296 0.1825 0.383458647 0.59 266 5 2 393 3R:25664855-25664912 6 347 3619 FBgn0261986 768.6366667 27.28 42.04333333 0.451448669 12.71994135 8.25338936 4 4 4 0.1 dme-miR-999-3p 7mer-A1 GTTAACA 3R 25665049 25665055 + 3R_25665049_25665055_+ 0.715385923 0.818534514 0.766960218 0.072937075 RASSF8 FBtr0084898 25664654 25665640 3R + 25665019 25665099 3'utr RASSF8 FlyBase G45892.1 TTTTGGTTAATTTTTGCTGCTAGTCTACGTGTTAACAAAAACCCTTTCCAATCTCTACAATTCGCCATTAGTTGTTAACTT 17 25665045 0.801081133 8 15 144 1 1.301029996 0.15 0.117647059 0.25 17 0 0 20 3R:25665019-25665099 7 RASSF8 FBtr0084898 25664654 25665640 GTTAACA 7mer-A1 dme-miR-999-3p 3R + 25665023 25665091 3'utr RASSF8 FlyBase G34610.1 GGTTAATTTTTGCTGCTAGTCTACGTGTTAACAAAAACCCTTTCCAATCTCTACAATTCGCCATTAGTT 12 25665045 0.987714066 7 10 92 0.894736842 1.230448921 0.052631579 0.5 0.684210526 12 2 0 17 3R:25665023-25665091 7 7 3620 FBgn0261986 768.6366667 27.28 42.04333333 0.009107034 0.25659824 0.166494886 4 4 4 0.1 dme-miR-252-5p 8mer-m1 GTACTTAG 3R 25665245 25665252 + 3R_25665245_25665252_+ 0.63423543 0.636374277 0.635304853 0.001512431 RASSF8 FBtr0084898 25664654 25665640 3R + 25665211 25665295 3'utr RASSF8 FlyBase G45893.1 TAGAATTCACAATTCGAATTACACAAAACTTATTGTACTTAGCAATTAGCGCAGCTTTAAAAAAACAAATTAGCAATGCTTTGTT 13 25665244 0.971758721 7 13 78 1 1.204119983 0.0625 0.153846154 0.3125 13 0 0 16 3R:25665211-25665295 8 RASSF8 FBtr0084898 25664654 25665640 GTACTTAG 8mer-m1 dme-miR-252-5p 3R + 25665233 25665275 3'utr RASSF8 FlyBase G34611.1 ACAAAACTTATTGTACTTAGCAATTAGCGCAGCTTTAAAAAAA 7 25665243 0.761161954 4 7 41 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 3R:25665233-25665275 8 7.5 3621 FBgn0261986 768.6366667 27.28 42.04333333 0.009757536 0.274926686 0.178387378 1 2 1.5 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 25665488 25665493 + 3R_25665488_25665493_+ 0.668297264 0.79469743 0.731497347 0.089378368 RASSF8 FBtr0084898 25664654 25665640 3R + 25665466 25665538 3'utr RASSF8 FlyBase G45894.1 ATTTAATATTTACACAAACTGATGATGATAGTGAACTACAAAACACCAACGGAAATGCAATTTATCGAATATT 36 25665486 0.827785411 10 34 174 0.951219512 1.591064607 0.073170732 0.138888889 0.243902439 36 2 0 39 3R:25665466-25665538 6 RASSF8 FBtr0084898 25664654 25665640 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R + 25665466 25665541 3'utr RASSF8 FlyBase G34612.1 ATTTAATATTTACACAAACTGATGATGATAGTGAACTACAAAACACCAACGGAAATGCAATTTATCGAATATTATA 34 25665488 0.91705824 8 32 165 0.957446809 1.653212514 0.170212766 0.294117647 0.489361702 34 2 0 45 3R:25665466-25665541 6 21.5 3622 FBgn0261986 768.6366667 27.28 42.04333333 0.027971603 0.788123167 0.511377151 2 0 1 0.1 dme-miR-7-5p 6mer3-8 GTCTTC 3R 25679281 25679286 + 3R_25679281_25679286_+ 0.999975693 0.999975821 0.999975757 7.07E-08 CG5039 FBtr0084900 25679239 25679529 3R + 25679224 25679335 stop_codon CG5039 FlyBase G45896.1 ACGCCTCCAATGCCTAGTGAATCTCAAAAGTCTTCCATACACTTTATTGTCCACGTTGTCTTCAAACGGTGGTTGTCATCGGTTTAGTTACTACTGCAAACTACGTGCCTCT 45 25679279 0.983528738 8 42 330 0.962962963 1.414973348 0.203703704 0.2 0.333333333 45 1 1 52 3R:25679224-25679335 6 CG5039 FBtr0084900 25679239 25679529 GTCTTC 6mer3-8 dme-miR-7-5p 3R + 25679223 25679323 stop_codon CG5039 FlyBase G34614.1 AACGCCTCCAATGCCTAGTGAATCTCAAAAGTCTTCCATACACTTTATTGTCCACGTTGTCTTCAAACGGTGGTTGTCATCGGTTTAGTTACTACTGCAAA 31 25679279 0.824513547 7 30 244 0.977272727 1.633468456 0.318181818 0.322580645 0.522727273 31 1 0 43 3R:25679223-25679323 6 18 3623 FBgn0039356 51.46666667 9.296666667 14.23333333 0.349740933 1.936177842 1.264637002 2 2 2 0.1 dme-miR-317-3p 8mer-A1 TGTGTTCA 3R 25683350 25683357 + 3R_25683350_25683357_+ 0.630874762 0.631133742 0.631004252 0.00018307 CG5028 FBtr0113289 25683087 25683780 3R + 25683310 25683381 3'utr CG5028 FlyBase G45907.2 AACCCAAACAAAATATGTTACCCCGGCTAAATGTCCATTGTGTGTTCATTCGATGTCCAAGTGTGATAATTC 12 25683348 0.916947305 9 11 80 0.866666667 1.113943352 0.2 0.166666667 0.333333333 12 2 0 13 3R:25683310-25683381 8 CG5028 FBtr0113289 25683087 25683780 TGTGTTCA 8mer-A1 dme-miR-317-3p 3R + 25683332 25683383 3'utr CG5028 FlyBase G34623.1 CCGGCTAAATGTCCATTGTGTGTTCATTCGATGTCCAAGTGTGATAATTCAG 8 25683348 0.778352957 5 8 69 1 1 0.5 0.25 0.4 8 0 0 10 3R:25683332-25683383 8 6 3624 FBgn0039358 738.9366667 46.93 71.87666667 0.008119776 0.127849989 0.083476325 2 2 2 0.1 dme-miR-276a-3p 6mer2-7 GTTCCT 3R 25698848 25698853 - 3R_25698848_25698853_- 0.999998991 0.99999856 0.999998775 2.83E-07 LpR2 FBtr0113387|FBtr0113385|FBtr0113384 25698725|25698725|25698725 25699984|25699984|25699984 3R - 25698791 25698874 3'utr LpR2 FlyBase G54761.1 AATGTGTATTGGCAATTTTTGGTTCCTGTAAAATGTATTTTAATTTAAGCATGAAAAGTATTTGCTTTAATGCTTTTTTGAAAC 55 25698855 0.993485907 10 50 625 0.898305085 1.423245874 0.152542373 0.072727273 0.13559322 55 5 1 53 3R:25698791-25698874 6 LpR2 FBtr0113387|FBtr0113385|FBtr0113384 25698725|25698725|25698725 25699984|25699984|25699984 GTTCCT 6mer2-7 dme-miR-276a-3p 3R - 25698801 25698874 3'utr LpR2 FlyBase G41345.1 AATGTGTATTGGCAATTTTTGGTTCCTGTAAAATGTATTTTAATTTAAGCATGAAAAGTATTTGCTTTAATGCT 47 25698855 0.991830186 7 46 513 0.985294118 1.826074803 0.102941176 0.382978723 0.573529412 47 1 0 67 3R:25698801-25698874 6 48.5 3625 FBgn0051092 94.66666667 3.816666667 5.916666667 0.512323944 12.70742358 8.197183099 2 2 2 0.1 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 25699011 25699017 - 3R_25699011_25699017_- 0.775392066 0.769239654 0.77231586 0.004350404 LpR2 FBtr0113387|FBtr0113385|FBtr0113384 25698725|25698725|25698725 25699984|25699984|25699984 3R - 25698949 25699045 3'utr LpR2 FlyBase G54762.1 TTTCTTTCTTGGGTATTCAAAACAATTTGCTGTGATCAGTTTAAAAGCATTAGACCTGCATTAAATCATCTTATTCGTAGTGATTTTACTATTCTTC 537 25699019 0.773574578 19 522 4419 0.969984202 1.788168371 0.120063191 0.143389199 0.273301738 537 10 9 614 3R:25698949-25699045 7 LpR2 FBtr0113387|FBtr0113385|FBtr0113384 25698725|25698725|25698725 25699984|25699984|25699984 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R - 25698908 25699044 3'utr LpR2 FlyBase G41346.1 TTCTTTCTTGGGTATTCAAAACAATTTGCTGTGATCAGTTTAAAAGCATTAGACCTGCATTAAATCATCTTATTCGTAGTGATTTTACTATTCTTCATTTATTTAGTGTATAAACAAGCTTTCAATCATTTTAACTT 355 25699019 0.764855459 19 343 2872 0.970260223 1.939519253 0.128252788 0.397183099 0.602230483 355 11 5 522 3R:25698908-25699044 7 425 3626 FBgn0051092 94.66666667 3.816666667 5.916666667 4.48943662 111.3537118 71.83098592 2 2 2 0.1 dme-miR-14-3p 8mer-A1 AAGACTGA 3R 25741857 25741864 - 3R_25741857_25741864_- 0.64353895 0.63896019 0.64124957 0.00323763 LpR1 FBtr0301467|FBtr0335236|FBtr0113480|FBtr0301470|FBtr0335235|FBtr0335237|FBtr0301469|FBtr0301466|FBtr0335238|FBtr0301471 25741346|25741346|25741346|25741346|25741346|25741346|25741346|25741346|25741346|25741346 25741979|25741979|25741979|25741979|25741979|25741979|25741979|25741979|25741979|25741979 3R - 25741836 25741878 3'utr LpR1 FlyBase G54784.1 AACACACACGCCTGAAGACTGAGCAACTCTGTGTATTGTGTAA 11 25741866 0.959682383 4 9 53 0.866666667 1.113943352 0.066666667 0.272727273 0.466666667 11 2 0 13 3R:25741836-25741878 8 LpR1 FBtr0335237|FBtr0335235|FBtr0301466|FBtr0301469|FBtr0335238|FBtr0301471|FBtr0301467|FBtr0335236|FBtr0113480|FBtr0301470 25741346|25741346|25741346|25741346|25741346|25741346|25741346|25741346|25741346|25741346 25741979|25741979|25741979|25741979|25741979|25741979|25741979|25741979|25741979|25741979 AAGACTGA 8mer-A1 dme-miR-14-3p 3R - 25741843 25741873 3'utr LpR1 FlyBase G41358.1 ACACGCCTGAAGACTGAGCAACTCTGTGTAT 5 25741866 0.904113456 2 4 19 0.833333333 0.698970004 0 0.2 0.333333333 5 1 0 5 3R:25741843-25741873 8 8 3627 FBgn0066101 6 0.153333333 0.226666667 1.333333333 52.17391304 35.29411765 2 2 2 0.1 dme-miR-277-3p 6mer2-7 GCATTT 3R 25853811 25853816 + 3R_25853811_25853816_+ 0.991119422 0.998790265 0.994954843 0.005424145 CG5886 FBtr0084907 25853743 25853989 3R + 25853796 25853844 3'utr CG5886 FlyBase G45911.1 AGCCTTCCCTGCAAAGCATTTTGTGTCATCCATGTCTCAACTGAAAAAC 9 25853816 0.836618741 7 9 78 1 0.954242509 0.222222222 0 0 9 0 0 9 3R:25853796-25853844 6 CG5886 FBtr0084907 25853743 25853989 GCATTT 6mer2-7 dme-miR-277-3p 3R + 25853781 25853838 3'utr CG5886 FlyBase G34626.1 CTCGGGCGGCCACCAAGCCTTCCCTGCAAAGCATTTTGTGTCATCCATGTCTCAACTG 7 25853816 0.981105696 5 7 53 1 1.146128036 0.5 0.571428571 0.785714286 7 0 0 14 3R:25853781-25853838 6 7 3628 FBgn0039379 737.67 47.67 73.31 0.009489338 0.146842878 0.095484927 -5 -5 -5 0.1 dme-miR-14-3p 6mer3-8 AAGACT 3R 25874463 25874468 - 3R_25874463_25874468_- 0.976013644 0.985266728 0.980640186 0.00654293 Tsp96F FBtr0084912|FBtr0330164|FBtr0330163 25873532|25872898|25873532 25875089|25875089|25875041 3R - 25874451 25874482 3'utr Tsp96F FlyBase G54792.1 TTGTTTCCTCCCATAAGACTTTTGAATCGATT 15 25874461 0.717564612 3 15 120 1 1.278753601 0.052631579 0.266666667 0.421052632 15 0 0 19 3R:25874451-25874482 6 Tsp96F FBtr0330163|FBtr0084912|FBtr0330164 25873532|25873532|25872898 25875041|25875089|25875089 AAGACT 6mer3-8 dme-miR-14-3p 3R - 25874442 25874480 3'utr Tsp96F FlyBase G41361.1 GTTTCCTCCCATAAGACTTTTGAATCGATTACTTTTTTT 14 25874461 0.981920019 4 14 109 1 1.361727836 0.217391304 0.357142857 0.608695652 14 0 0 23 3R:25874442-25874480 6 14.5 3629 FBgn0027865 972.28 39.09 59.75 0.014913399 0.370938859 0.242677824 -7 -7 -7 0.1 dme-miR-2b-2-5p 7mer-A1 TGAAGAA 3R 25887418 25887424 + 3R_25887418_25887424_+ 0.794849015 0.814240553 0.804544784 0.013711932 SppL FBtr0084911|FBtr0344118|FBtr0084909|FBtr0300820|FBtr0300819|FBtr0084910 25887365|25887365|25887365|25887365|25887365|25887365 25888071|25888071|25888230|25888071|25888230|25887564 3R + 25887396 25887461 3'utr SppL FlyBase G45918.1 AAAAAACCAACAGCATACAATGTGAAGAACACACACACATAAGATCTAATACTAACGTTTGTCTCT 12 25887416 0.949648491 6 10 47 0.846153846 1.041392685 0.230769231 0.083333333 0.153846154 12 2 0 11 3R:25887396-25887461 7 SppL FBtr0084909|FBtr0300820|FBtr0300819|FBtr0084910|FBtr0084911|FBtr0344118 25887365|25887365|25887365|25887365|25887365|25887365 25888230|25888071|25888230|25887564|25888071|25888071 TGAAGAA 7mer-A1 dme-miR-2b-2-5p 3R + 25887393 25887479 3'utr SppL FlyBase G34631.1 AACAAAAAACCAACAGCATACAATGTGAAGAACACACACACATAAGATCTAATACTAACGTTTGTCTCTTAAATAACGTATTGAGTA 9 25887416 0.994121909 4 9 45 1 1.230448921 0.352941176 0.555555556 0.764705882 9 0 0 17 3R:25887393-25887479 7 5 3630 FBgn0039381 696.8266667 34.86 53.62333333 0.007175386 0.143430866 0.093242991 2 2 2 0.1 dme-miR-184-3p 7mer-m8 TCCGTCC 3R 25887949 25887955 + 3R_25887949_25887955_+ 0.661615188 0.661615206 0.661615197 0 SppL FBtr0084911|FBtr0344118|FBtr0084909|FBtr0300820|FBtr0300819 25887365|25887365|25887365|25887365|25887365 25888071|25888071|25888230|25888071|25888230 3R + 25887916 25888043 3'utr SppL FlyBase G45924.1 AATCGAGATCCGTTTCCGTTTCACACGCTCATTTCCGTCCTTCGATTTTTTCGTTTTGTCACCCAATGTTTCCCACACATCTTCACAACCATAATGATGTTTTGCCAAAATGCATGTGTTCGTTGCAA 618 25887948 0.984084791 15 613 5045 0.990691489 2.872156273 0.167553191 0.165048544 0.313829787 618 7 0 745 3R:25887916-25888043 7 SppL FBtr0084909|FBtr0300820|FBtr0300819|FBtr0084911|FBtr0344118 25887365|25887365|25887365|25887365|25887365 25888230|25888071|25888230|25888071|25888071 TCCGTCC 7mer-m8 dme-miR-184-3p 3R + 25887922 25887976 3'utr SppL FlyBase G34634.1 GATCCGTTTCCGTTTCACACGCTCATTTCCGTCCTTCGATTTTTTCGTTTTGTCA 396 25887948 0.725859129 8 386 3013 0.977309562 2.002166062 0.141004862 0.396464646 0.612641815 396 9 5 603 3R:25887922-25887976 7 501 3631 FBgn0039381 696.8266667 34.86 53.62333333 0.718973633 14.37177281 9.342947722 1 1 1 0.1 dme-miR-317-3p 6mer2-7 GTGTTC 3R 25892477 25892482 + 3R_25892477_25892482_+ 0.999937627 0.853709054 0.92682334 0.103399164 Lnk FBtr0339162|FBtr0339161 25892042|25892042 25893270|25893270 3R + 25892456 25892495 3'utr Lnk FlyBase G45936.1 AAGTGATTACCATGAATTTGAGTGTTCGCCTAAAGACAAA 5 25892473 0.972335777 4 5 35 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 3R:25892456-25892495 6 Lnk FBtr0339161|FBtr0339162 25892042|25892042 25893270|25893270 GTGTTC 6mer2-7 dme-miR-317-3p 3R + 25892458 25892490 3'utr Lnk FlyBase G34641.1 GTGATTACCATGAATTTGAGTGTTCGCCTAAAG 5 25892473 0.726289796 3 4 38 0.666666667 0.602059991 0.166666667 0.2 0.333333333 5 2 0 4 3R:25892458-25892490 6 5 3632 FBgn0028717 647.6666667 24.78 37.87333333 0.007720021 0.201775626 0.132019011 4 4 4 0.1 dme-miR-263a-5p 8mer-m1 GTGCCATT 3R 25892861 25892868 + 3R_25892861_25892868_+ 0.382025358 0.473780764 0.427903061 0.064880866 Lnk FBtr0339160|FBtr0339162|FBtr0084937|FBtr0339161|FBtr0084935|FBtr0084936 25892801|25892042|25892801|25892042|25892801|25892801 25893270|25893270|25893270|25893270|25893270|25893270 3R + 25892826 25892871 3'utr Lnk FlyBase G45937.1 GCATTTCGCGGCTTAACCAGCGGAACTTTACTTTTGTGCCATTTTA 9 25892860 0.982325781 4 8 90 0.888888889 0.903089987 0 0 0 9 1 0 8 3R:25892826-25892871 8 Lnk FBtr0084935|FBtr0084936|FBtr0084937|FBtr0339161|FBtr0339160|FBtr0339162 25892801|25892801|25892801|25892042|25892801|25892042 25893270|25893270|25893270|25893270|25893270|25893270 GTGCCATT 8mer-m1 dme-miR-263a-5p 3R + 25892825 25892886 3'utr Lnk FlyBase G34642.1 TGCATTTCGCGGCTTAACCAGCGGAACTTTACTTTTGTGCCATTTTAATCATTGTCCTAAAG 8 25892860 0.993731794 4 5 65 0.8 1.079181246 0.066666667 0.5 0.733333333 8 3 0 12 3R:25892825-25892886 8 7 3633 FBgn0028717 647.6666667 24.78 37.87333333 0.010808029 0.282485876 0.184826615 1 1 1 0.1 dme-miR-317-3p 8mer-A1 TGTGTTCA 3R 25893028 25893035 + 3R_25893028_25893035_+ 0.631136744 0.631136744 0.631136744 0 Lnk FBtr0339160|FBtr0339162|FBtr0084937|FBtr0339161|FBtr0084935|FBtr0084936 25892801|25892042|25892801|25892042|25892801|25892801 25893270|25893270|25893270|25893270|25893270|25893270 3R + 25892917 25893043 3'utr Lnk FlyBase G45937.3 ATGTGCGTTCTTTGCTTTCTTGATTCACTTGTTTCTATTTTAGTTAGTACCTCTTTTGGAAGACATGAAGTAACTGAACATTATTATGTATACATTATATAGCTAAATGTGTGTGTTCATTTTAAGT 25 25893030 0.770772092 15 24 224 0.964285714 1.431363764 0.142857143 0.12 0.214285714 25 1 0 27 3R:25892917-25893043 8 Lnk FBtr0084935|FBtr0084936|FBtr0084937|FBtr0339161|FBtr0339160|FBtr0339162 25892801|25892801|25892801|25892042|25892801|25892042 25893270|25893270|25893270|25893270|25893270|25893270 TGTGTTCA 8mer-A1 dme-miR-317-3p 3R + 25893009 25893034 3'utr Lnk FlyBase G34644.1 CATTATATAGCTAAATGTGTGTGTTC 9 25893030 0.735286682 2 9 73 1 1.204119983 0.0625 0.444444444 0.6875 9 0 0 16 3R:25893009-25893034 7 9.5 3634 FBgn0028717 647.6666667 24.78 37.87333333 0.014668039 0.383373688 0.25083612 -2 -2 -2 0.1 dme-miR-968-5p 6mer3-8 ACTACT 3R 25894983 25894988 + 3R_25894983_25894988_+ 1 1 1 0 CG5913 FBtr0084938 25894933 25895026 3R + 25894950 25894991 3'utr CG5913 FlyBase G45945.1 AATGTAGACCATAAACGACTGATCCTCTTGTAAACTACTAAC 54 25894961 0.812882482 8 48 285 0.916666667 1.138302698 0.1 0.111111111 0.2 54 2 3 55 3R:25894950-25894991 6 CG5913 FBtr0084938 25894933 25895026 ACTACT 6mer3-8 dme-miR-968-5p 3R + 25894942 25894992 3'utr CG5913 FlyBase G34651.1 TTCCCAAAAATGTAGACCATAAACGACTGATCCTCTTGTAAACTACTAACA 48 25894961 0.78499005 8 46 285 0.955223881 1.806179974 0.119402985 0.291666667 0.492537313 48 3 0 64 3R:25894942-25894992 6 11.5 3635 FBgn0039385 97.66666667 7.92 12.23 0.11774744 1.452020202 0.940310711 22 22 22 0.1 dme-miR-7-5p 8mer-A1 GTCTTCCA 3R 26022783 26022790 + 3R_26022783_26022790_+ 0.675378678 0.675375656 0.675377167 2.12E-06 E(spl)m3-HLH FBtr0084958 26022693 26023127 3R + 26022749 26022794 3'utr E(spl)m3-HLH FlyBase G45962.1 AATGGCTATTGACCGTTCTGCAACAAGATCCGTTGTCTTCCAAAGT 8 26022782 0.976566965 5 8 54 1 0.954242509 0.333333333 0.125 0.222222222 8 0 0 9 3R:26022749-26022794 8 E(spl)m3-HLH FBtr0084958 26022693 26023127 GTCTTCCA 8mer-A1 dme-miR-7-5p 3R + 26022762 26022796 3'utr E(spl)m3-HLH FlyBase G34665.1 CGTTCTGCAACAAGATCCGTTGTCTTCCAAAGTAA 5 26022783 0.614741982 3 5 34 1 0.84509804 0.571428571 0.2 0.428571429 5 0 0 7 3R:26022762-26022796 8 6 3636 FBgn0002609 41.66666667 4.113333333 6.463333333 0.144 1.458670989 0.928313564 1 0 0.5 0.1 dme-miR-304-5p 8mer-A1 TGAGATTA 3R 26049117 26049124 + 3R_26049117_26049124_+ 0.583111408 0.584028866 0.583570137 0.00064877 gro FBtr0337057|FBtr0305047|FBtr0339900 26048604|26048604|26048604 26049911|26049911|26049911 3R + 26049025 26049128 3'utr gro FlyBase G45974.1 AAAAGTCGGCGATACCTACCTACGTTCATCTTAACATAAAAACAAATAGGAGGATAAGTGGAATTAGTCAGTCATTGCAATTGCAGGAGCGTTGAGATTATGAT 17 26049116 0.827575544 10 15 110 0.894736842 1.230448921 0.157894737 0.117647059 0.210526316 17 2 0 17 3R:26049025-26049128 8 gro FBtr0337057|FBtr0339900|FBtr0305047 26048604|26048604|26048604 26049911|26049911|26049911 TGAGATTA 8mer-A1 dme-miR-304-5p 3R + 26049031 26049134 3'utr gro FlyBase G34679.1 CGGCGATACCTACCTACGTTCATCTTAACATAAAAACAAATAGGAGGATAAGTGGAATTAGTCAGTCATTGCAATTGCAGGAGCGTTGAGATTATGATTACCAG 12 26049105 0.962429916 9 12 63 1 1.255272505 0.333333333 0.25 0.5 12 0 0 18 3R:26049031-26049134 8 5 3637 FBgn0001139 2815.8 93.08 143.0433333 0.001775694 0.053717232 0.034954443 1 12 6.5 0.1 dme-miR-980-3p 7mer-A1 GCAGCTA 3R 26049609 26049615 + 3R_26049609_26049615_+ 0.823349275 0.823348656 0.823348965 4.24E-07 gro FBtr0337057|FBtr0305047|FBtr0339900 26048604|26048604|26048604 26049911|26049911|26049911 3R + 26049587 26049625 3'utr gro FlyBase G45976.1 AGTGTAAAATCCTATATTTTGAGCAGCTAAACCCAACAC 15 26049606 0.718880605 4 15 87 1 1.204119983 0 0.066666667 0.125 15 0 0 16 3R:26049587-26049625 7 gro FBtr0337057|FBtr0339900|FBtr0305047 26048604|26048604|26048604 26049911|26049911|26049911 GCAGCTA 7mer-A1 dme-miR-980-3p 3R + 26049593 26049626 3'utr gro FlyBase G34681.1 AAATCCTATATTTTGAGCAGCTAAACCCAACACA 6 26049606 0.944704627 2 6 32 1 0.954242509 0 0.5 0.666666667 6 0 0 9 3R:26049593-26049626 7 10.5 3638 FBgn0001139 2815.8 93.08 143.0433333 0.003728958 0.112806188 0.07340433 3 3 3 0.1 dme-miR-965-3p 7mer-m8 TACGCTT 3R 26054491 26054497 - 3R_26054491_26054497_- 0.620201828 0.620200721 0.620201274 7.78E-07 Dak1 FBtr0084976 26054235 26054574 3R - 26054476 26054616 stop_codon Dak1 FlyBase G54802.1 TTCGGGGAGGTGGAAAAGATATTTGTGGCCAGCGGCTTCTAGATTTCCTGTTCATATTCCGGTTATGTGTGTAGTGCTATCCTTACCTTTCATTTGTACCCTCTAAAAAAATACATATATACGCTTGTTAATAGTAATGCA 57 26054489 0.891698128 20 54 469 0.957142857 1.525044807 0.1 0.210526316 0.357142857 57 2 1 67 3R:26054476-26054616 7 Dak1 FBtr0084976 26054235 26054574 TACGCTT 7mer-m8 dme-miR-965-3p 3R - 26054477 26054552 3'utr Dak1 FlyBase G41368.1 ATGTGTGTAGTGCTATCCTTACCTTTCATTTGTACCCTCTAAAAAAATACATATATACGCTTGTTAATAGTAATGC 38 26054488 0.674912521 14 34 332 0.933333333 1.447158031 0.15 0.394736842 0.616666667 38 3 1 56 3R:26054477-26054552 7 22 3639 FBgn0028833 760.9966667 77.71 118.7166667 0.028909456 0.283103848 0.185315176 -8 -9 -8.5 0.1 dme-miR-995-5p 6mer3-8 AATTCG 3R 26130120 26130125 + 3R_26130120_26130125_+ 0.939487888 0.964232763 0.951860325 0.017497287 CG31324 FBtr0333926|FBtr0084985|FBtr0333925 26129613|26129613|26129613 26130190|26130190|26130674 3R + 26130095 26130137 3'utr CG31324 FlyBase G45992.1 AATTTCAATGGGCTTCGTTTTGAAAAATTCGTACTGATTAAAT 12 26130122 0.820914757 5 12 121 1 1.079181246 0 0 0 12 0 0 12 3R:26130095-26130137 6 CG31324 FBtr0333925|FBtr0084985|FBtr0333926 26129613|26129613|26129613 26130674|26130190|26130190 AATTCG 6mer3-8 dme-miR-995-5p 3R + 26130094 26130137 3'utr CG31324 FlyBase G34697.1 AAATTTCAATGGGCTTCGTTTTGAAAAATTCGTACTGATTAAAT 18 26130123 0.789672609 5 16 180 0.923076923 1.079181246 0 0.277777778 0.5 18 1 1 24 3R:26130094-26130137 6 13.5 3640 FBgn0051324 1208.083333 49.80333333 76.73666667 0.011174726 0.271066194 0.175926328 -2 -3 -2.5 0.1 dme-miR-965-3p 7mer-m8 TACGCTT 3R 26130354 26130360 + 3R_26130354_26130360_+ 0.620204849 0.620204833 0.620204841 0 CG31324 FBtr0333925 26129613 26130674 3R + 26130332 26130374 3'utr CG31324 FlyBase G45994.1 AGCATAATCAATGGAACCCTACTACGCTTTTCGCTTTATACAA 89 26130361 0.607114703 5 86 598 0.973684211 1.744292983 0.219298246 0.247191011 0.412280702 89 2 1 111 3R:26130332-26130374 7 CG31324 FBtr0333925 26129613 26130674 TACGCTT 7mer-m8 dme-miR-965-3p 3R + 26130332 26130374 3'utr CG31324 FlyBase G34699.1 AGCATAATCAATGGAACCCTACTACGCTTTTCGCTTTATACAA 72 26130361 0.615389224 4 70 490 0.963302752 2.021189299 0.174311927 0.402777778 0.605504587 72 4 0 105 3R:26130332-26130374 7 79.5 3641 FBgn0051324 1208.083333 49.80333333 76.73666667 0.065806719 1.596278696 1.036010599 -7 -7 -7 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3R 26184875 26184881 + 3R_26184875_26184881_+ 0.443130887 0.443131017 0.443130952 7.07E-08 CG31323 FBtr0084988|FBtr0307339 26184611|26184611 26187307|26184974 3R + 26184854 26184905 3'utr CG31323 FlyBase G45999.1 ATGGAATTCATCAAGCAATTATGTGATTTTTAAGCGAATACTTAACAACTAT 39 26184872 0.990043342 7 39 384 1 1.785329835 0 0.41025641 0.62295082 39 0 0 61 3R:26184854-26184905 7 CG31323 FBtr0307339|FBtr0084988 26184611|26184611 26184974|26187307 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 26184815 26184899 3'utr CG31323 FlyBase G34701.1 ACGCTCGGAAACACACTCTCTCTTACACACAATAACATTATGGAATTCATCAAGCAATTATGTGATTTTTAAGCGAATACTTAAC 31 26184872 0.990095896 11 28 285 0.909090909 1.602059991 0 0.290322581 0.5 31 4 0 40 3R:26184815-26184899 7 31 3642 FBgn0051323 9.51 0.34 0.533333333 3.259726604 91.17647059 58.125 3 3 3 0.1 dme-miR-980-5p 7mer-A1 AAAAACA 3R 26233274 26233280 + 3R_26233274_26233280_+ 0.782848819 0.782911824 0.782880321 4.45E-05 CG12290 FBtr0084990|FBtr0339612 26233100|26233100 26233329|26234700 3R + 26233141 26233289 3'utr CG12290 FlyBase G46009.1 AAACACTAAACTTGCTTGCTGAAGAATTCTAAGAACAGTATTCGTAATTTGTAAGTCTAGCAATTAACAAAGACAACTGTTTGAATTTGAGTTTTAAGACCAGATCATGCTGTCCTAGAAGCTTCTCATGCCAAAAAACAAAACCACAA 46 26233248 0.974074026 13 44 277 0.962264151 1.40654018 0.075471698 0.152173913 0.264150943 46 1 1 51 3R:26233141-26233289 7 CG12290 FBtr0339612 26233100 26234700 AAAAACA 7mer-A1 dme-miR-980-5p 3R + 26233227 26233282 3'utr CG12290 FlyBase G34708.3 TTGAGTTTTAAGACCAGATCATGCTGTCCTAGAAGCTTCTCATGCCAAAAAACAAA 19 26233256 0.974960203 5 18 88 0.967741935 1.477121255 0.258064516 0.368421053 0.612903226 19 1 0 30 3R:26233227-26233282 7 5 3643 FBgn0039419 2058.006667 56.21 86.04666667 0.002429535 0.088952144 0.058108003 26 18 22 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 26233366 26233371 + 3R_26233366_26233371_+ 0.907008934 0.907237997 0.907123465 0.000161998 CG12290 FBtr0339612 26233100 26234700 3R + 26233344 26233436 3'utr CG12290 FlyBase G46011.1 AAAAAACAAAAAACAAAACAAAGTACCTTTTAAAAAATAGAAAACTGTGTACAAGTCAAATTAACAAAGATTGAGAGTGATGGGAGTTATAAT 49 26233373 0.965197737 4 45 223 0.966666667 1.462397998 0.05 0.163265306 0.316666667 49 1 1 58 3R:26233344-26233436 6 CG12290 FBtr0339612 26233100 26234700 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 26233347 26233434 3'utr CG12290 FlyBase G34709.1 AAACAAAAAACAAAACAAAGTACCTTTTAAAAAATAGAAAACTGTGTACAAGTCAAATTAACAAAGATTGAGAGTGATGGGAGTTATA 41 26233373 0.959615906 5 38 186 0.948275862 1.740362689 0.206896552 0.292682927 0.5 41 3 0 55 3R:26233347-26233434 6 33.5 3644 FBgn0039419 2058.006667 56.21 86.04666667 0.016277887 0.595979363 0.389323623 -7 -7 -7 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 26233500 26233505 + 3R_26233500_26233505_+ 0.999798775 0.999665585 0.99973218 9.42E-05 CG12290 FBtr0339612 26233100 26234700 3R + 26233470 26233518 3'utr CG12290 FlyBase G46012.1 AAGCCAAGCCAAGTTGAGATCGTAATCAATGTACCTAAGCAACTTGCAT 43 26233499 0.919940568 3 43 239 1 1.681241237 0.020833333 0.11627907 0.208333333 43 0 0 48 3R:26233470-26233518 6 CG12290 FBtr0339612 26233100 26234700 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 26233440 26233528 3'utr CG12290 FlyBase G34710.1 AGGGTGGATATCAAACTGAAAAGTGGAACCAAGCCAAGCCAAGTTGAGATCGTAATCAATGTACCTAAGCAACTTGCATATGAACATTT 37 26233499 0.971999433 5 35 210 0.983606557 1.477121255 0.032786885 0.378378378 0.62295082 37 0 1 60 3R:26233440-26233528 6 37 3645 FBgn0039419 2058.006667 56.21 86.04666667 0.017978562 0.658245864 0.429999225 1 1 1 0.1 dme-miR-980-3p 7mer-A1 GCAGCTA 3R 26233996 26234002 + 3R_26233996_26234002_+ 0.823262019 0.823349562 0.823305791 6.19E-05 CG12290 FBtr0339612 26233100 26234700 3R + 26233913 26234018 3'utr CG12290 FlyBase G46014.1 CAGCAGTTAGTTAGCCTTTGGTTAGCCAACGGCTATTGGGCCATTAAGTCAATTTGCTTTTTAGAACACCGCGGGCATTGCGTGCAGCTAAATACCTCATTAGTTA 22 26233991 0.966719795 13 21 117 0.961538462 1.397940009 0.153846154 0.136363636 0.269230769 22 1 0 25 3R:26233913-26234018 7 CG12290 FBtr0339612 26233100 26234700 GCAGCTA 7mer-A1 dme-miR-980-3p 3R + 26233958 26234002 3'utr CG12290 FlyBase G34712.1 AAGTCAATTTGCTTTTTAGAACACCGCGGGCATTGCGTGCAGCTA 6 26233998 0.969751968 5 5 31 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3R:26233958-26234002 7 8 3646 FBgn0039419 2058.006667 56.21 86.04666667 0.003887257 0.14232343 0.092972805 5 -2 1.5 0.1 dme-miR-11-3p 7mer-m1 TGTGATG 3R 26234358 26234364 + 3R_26234358_26234364_+ 0.61207112 0.612071023 0.612071072 7.07E-08 CG12290 FBtr0339612 26233100 26234700 3R + 26234341 26234514 3'utr CG12290 FlyBase G46018.1 ATTTCAAAACCAATTATTGTGATGTTGAGCAAGGGGGCAACCAAGAATGTAATTTCGAAATGCATTAAAAATAACTTAAAACATGTATTAATAGTTATAATATATACAAGCTTATGTGTGTATACATACTTTACTAAATAGTGATATTTTTTCAAATTTATTCAACTGTCATTC 71 26234357 0.984499027 18 68 545 0.938271605 1.579783597 0.172839506 0.126760563 0.234567901 71 4 1 76 3R:26234341-26234514 7 CG12290 FBtr0339612 26233100 26234700 TGTGATG 7mer-m1 dme-miR-11-3p 3R + 26234311 26234382 3'utr CG12290 FlyBase G34715.1 ATTCATGCATGTGTGTCGGACAAAGGAAATATTTCAAAACCAATTATTGTGATGTTGAGCAAGGGGGCAACC 25 26234357 0.980170331 8 24 171 0.923076923 1.556302501 0.512820513 0.36 0.58974359 25 3 0 36 3R:26234311-26234382 7 38 3647 FBgn0039419 2058.006667 56.21 86.04666667 0.018464469 0.676036292 0.441620826 1 1 1 0.1 dme-miR-184-5p 7mer-m8 TGATAAG 3R 26254725 26254731 - 3R_26254725_26254731_- 0.658999343 0.658999343 0.658999343 0 Ald FBtr0084994|FBtr0339614 26254067|26254601 26255341|26255341 3R - 26254692 26254792 3'utr Ald FlyBase G54819.1 GATCCACTATGAAAATCGATGTTTTACCATTATTATTATTATTAAACTTTATATTTATGATTGATAAGTATAAGTGAAACAAATGACGAGAATAAACAAAC 12 26254709 0.992094115 9 10 114 0.769230769 1 0.230769231 0.083333333 0.153846154 12 3 0 10 3R:26254692-26254792 7 Ald FBtr0339614|FBtr0084994 26254601|26254067 26255341|26255341 TGATAAG 7mer-m8 dme-miR-184-5p 3R - 26254692 26254796 3'utr Ald FlyBase G41383.1 AAAAGATCCACTATGAAAATCGATGTTTTACCATTATTATTATTATTAAACTTTATATTTATGATTGATAAGTATAAGTGAAACAAATGACGAGAATAAACAAAC 13 26254761 0.989412884 9 12 114 1 1.301029996 0.05 0.384615385 0.6 13 0 0 20 3R:26254692-26254796 7 3 3648 FBgn0000064 2998.926667 179.2266667 272.1633333 0.001000358 0.016738581 0.011022793 -22 30 4 0.1 dme-miR-282-5p 6mer2-7 GAGGCT 3R 26254847 26254852 - 3R_26254847_26254852_- 0.999999998 1 0.999999999 0 Ald FBtr0084994|FBtr0339614 26254067|26254601 26255341|26255341 3R - 26254808 26254881 3'utr Ald FlyBase G54820.1 CAATCACTATCAGCAACACCTAAATGTATGAGGCTTGTAACATTGAAGTCGCACAACGTTTTTTGAATTTTTTT 186 26254853 0.914834612 10 185 1192 0.995495495 2.344392274 0.018018018 0.150537634 0.288288288 186 1 0 221 3R:26254808-26254881 6 Ald FBtr0339614|FBtr0084994 26254601|26254067 26255341|26255341 GAGGCT 6mer2-7 dme-miR-282-5p 3R - 26254826 26254876 3'utr Ald FlyBase G41384.1 ACTATCAGCAACACCTAAATGTATGAGGCTTGTAACATTGAAGTCGCACAA 67 26254853 0.946240926 8 67 408 1 2.012837225 0 0.417910448 0.621359223 67 0 0 103 3R:26254826-26254876 6 125 3649 FBgn0000064 2998.926667 179.2266667 272.1633333 0.041681579 0.697440857 0.459283029 1 1 1 0.1 dme-miR-2b-2-5p 6mer3-8 TTGAAG 3R 26254989 26254994 - 3R_26254989_26254994_- 0.986901997 0.999999703 0.99345085 0.009261472 Ald FBtr0084994|FBtr0339614 26254067|26254601 26255341|26255341 3R - 26254943 26255050 3'utr Ald FlyBase G54821.1 AATTCAACAATTCAAACAATTTTATCTTTAGTTTTAAGCACATGAACCTATTATTGTTGAAGTTATTACATTTCTATTCTATTATTATGATTATGCAAGATTTCAATG 42 26255008 0.991144169 14 41 437 0.979591837 1.681241237 0.06122449 0.166666667 0.285714286 42 1 0 48 3R:26254943-26255050 6 Ald FBtr0339614|FBtr0084994 26254601|26254067 26255341|26255341 TTGAAG 6mer3-8 dme-miR-2b-2-5p 3R - 26254987 26255031 3'utr Ald FlyBase G41385.1 TTTTATCTTTAGTTTTAAGCACATGAACCTATTATTGTTGAAGTT 16 26255008 0.888927535 5 15 167 0.961538462 1.096910013 0 0.4375 0.653846154 16 0 1 25 3R:26254987-26255031 6 7.5 3650 FBgn0000064 2998.926667 179.2266667 272.1633333 0.002500895 0.041846451 0.027556982 14 14 14 0.1 dme-miR-2a-2-5p 7mer-m8 TGATGAG 3R 26255088 26255094 - 3R_26255088_26255094_- 0.658999267 0.658999317 0.658999292 0 Ald FBtr0084994|FBtr0339614 26254067|26254601 26255341|26255341 3R - 26255067 26255122 3'utr Ald FlyBase G54822.1 TATAACATTATTTTAGAGAACAACTAAATGATGAGTGCAGAAGAAAGGATTGAATA 25 26255092 0.73773295 5 24 106 1 1.477121255 0 0.16 0.3 25 0 0 30 3R:26255067-26255122 7 Ald FBtr0339614|FBtr0084994 26254601|26254067 26255341|26255341 TGATGAG 7mer-m8 dme-miR-2a-2-5p 3R - 26255053 26255110 3'utr Ald FlyBase G41386.1 TTAGAGAACAACTAAATGATGAGTGCAGAAGAAAGGATTGAATATGTTCGATGGAGAA 15 26255092 0.924426397 7 15 54 1 1.278753601 0.368421053 0.2 0.368421053 15 0 0 19 3R:26255053-26255110 7 17.5 3651 FBgn0000064 2998.926667 179.2266667 272.1633333 0.005835421 0.09764172 0.064299624 -2 -2 -2 0.1 dme-miR-184-3p 6mer3-8 TCCGTC 3R 26256258 26256263 - 3R_26256258_26256263_- 0.999971227 0.999982567 0.999976897 8.06E-06 Ald FBtr0114544|FBtr0085000 26255964|26255964 26256527|26256527 3R - 26256240 26256288 3'utr Ald FlyBase G54829.1 AGGGTATTTACGTGCCCGGCTCAATTCCGTCGTTTGCCGGCAATGCCAA 84 26256264 0.789324862 3 84 576 1 1.968482949 0.268817204 0.107142857 0.193548387 84 0 0 93 3R:26256240-26256288 6 Ald FBtr0085000|FBtr0114544 26255964|26255964 26256527|26256527 TCCGTC 6mer3-8 dme-miR-184-3p 3R - 26256235 26256288 3'utr Ald FlyBase G41391.1 AGGGTATTTACGTGCCCGGCTCAATTCCGTCGTTTGCCGGCAATGCCAACCTCT 33 26256264 0.796186436 3 33 241 1 1.643452676 0.136363636 0.242424242 0.431818182 33 0 0 44 3R:26256235-26256288 6 58.5 3652 FBgn0000064 2998.926667 179.2266667 272.1633333 0.019506979 0.326402321 0.214944457 1 1 1 0.1 dme-miR-1003-3p 8mer-A1 ATGTGAGA 3R 26453743 26453750 + 3R_26453743_26453750_+ 0.596274453 0.557774531 0.577024492 0.027223611 CG5447 FBtr0085012 26453708 26454585 3R + 26453708 26453821 stop_codon CG5447 FlyBase G46024.1 GACTTCCGCTTTCCCATTCAGCCAACGAGTTTTTCATGTGAGATCGAGCAGCTACAGTCGCATCAACAGGCATGTGAAGGAGAAGAGTCCGTTTCAGCAATTATCAAGCAAAAG 34 26453745 0.970220556 11 32 180 0.945945946 1.544068044 0.216216216 0.088235294 0.162162162 34 2 0 35 3R:26453708-26453821 8 CG5447 FBtr0085012 26453708 26454585 ATGTGAGA 8mer-A1 dme-miR-1003-3p 3R + 26453731 26453772 stop_codon CG5447 FlyBase G34720.1 AACGAGTTTTTCATGTGAGATCGAGCAGCTACAGTCGCATCA 13 26453745 0.711705003 4 12 74 0.952380952 1.301029996 0.19047619 0.461538462 0.666666667 13 1 0 20 3R:26453731-26453772 8 15 3653 FBgn0039427 734.0633333 64.46 98.42666667 0.020434204 0.232702451 0.152397724 -2 -2 -2 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 3R 26454175 26454181 + 3R_26454175_26454181_+ 0.620013231 0.618892861 0.619453046 0.000792172 CG5447 FBtr0330152|FBtr0085012 26453747|26453708 26454585|26454585 3R + 26454087 26454192 3'utr CG5447 FlyBase G46027.1 TTAATGATTAGCCAAGGCAGTGTACGGCCAGTTAGTTAGTATTTATGCAATAGCAGGCATAGTCATGTAAGTGAAAAGCTACCGAAACTGCATTTTGAGCCGAAGC 16 26454182 0.916428583 9 14 81 0.80952381 1.230448921 0.476190476 0.125 0.333333333 16 4 0 17 3R:26454087-26454192 7 CG5447 FBtr0330152|FBtr0085012 26453747|26453708 26454585|26454585 TGCATTT 7mer-m8 dme-miR-277-3p 3R + 26454160 26454191 3'utr CG5447 FlyBase G34724.1 AAAAGCTACCGAAACTGCATTTTGAGCCGAAG 5 26454181 0.85395908 3 4 25 0.777777778 0.84509804 0.111111111 0.6 0.777777778 5 2 0 7 3R:26454160-26454191 7 6.5 3654 FBgn0039427 734.0633333 64.46 98.42666667 0.008854822 0.100837729 0.066039014 -7 -6 -6.5 0.1 dme-miR-11-3p 7mer-m1 TGTGATG 3R 26469771 26469777 + 3R_26469771_26469777_+ 0.610285164 0.609910498 0.610097831 0.000264953 CG5455 FBtr0085015|FBtr0085016 26469401|26469401 26470008|26470008 3R + 26469603 26469788 3'utr CG5455 FlyBase G46036.1 CATATAATTATATACGCCTATCCATAGCTCAAGTTAGTTATACACATATTATGTTGCCTTTAGTTTAAGCTTAAAACGAGCAGATATATATGCTCAGACATCCCATCTGGTGTCAATGATATTTTGGAATTTTTGTGATCGATTGTGATCATTTTTCAAGCACTTTATTGTGATGATCCCCTAAAT 72 26469769 0.988761666 21 68 622 0.956521739 1.643452676 0.054347826 0.236111111 0.402173913 72 3 1 88 3R:26469603-26469788 7 CG5455 FBtr0085015|FBtr0085016 26469401|26469401 26470008|26470008 TGTGATG 7mer-m1 dme-miR-11-3p 3R + 26469695 26469786 3'utr CG5455 FlyBase G34735.1 CTCAGACATCCCATCTGGTGTCAATGATATTTTGGAATTTTTGTGATCGATTGTGATCATTTTTCAAGCACTTTATTGTGATGATCCCCTAA 47 26469770 0.987461187 15 45 402 0.970588235 1.342422681 0.220588235 0.361702128 0.558823529 47 0 2 66 3R:26469695-26469786 7 36 3655 FBgn0039430 151.6666667 6.406666667 9.843333333 0.237362637 5.619146722 3.657297663 2 1 1.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 26470793 26470799 - 3R_26470793_26470799_- 0.753382111 0.75274267 0.75306239 0.000452124 plum FBtr0305049|FBtr0305049|FBtr0305049 26470076|26470076|26470076 26472978|26472978|26472978 3R - 26470771 26470865 3'utr plum FlyBase G54842.1 AACGATGCGGAGAACTGGAGAAAAAATAAGTAAAATAGCTGCGATTGTGATCGCCGTGTAAGTGGATGTGATAAATGTTTAAATTATTTAAGCGC 155 26470803 0.885627819 17 147 1129 0.952941176 1.73239376 0.4 0.096774194 0.176470588 155 6 2 162 3R:26470771-26470865 7 plum FBtr0305049|FBtr0305049|FBtr0305049 26470076|26470076|26470076 26472978|26472978|26472978 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 26470768 26470838 3'utr plum FlyBase G41398.1 AAGTAAAATAGCTGCGATTGTGATCGCCGTGTAAGTGGATGTGATAAATGTTTAAATTATTTAAGCGCAAA 95 26470803 0.836633146 9 89 693 0.903448276 1.272173256 0.310344828 0.4 0.606896552 95 8 6 131 3R:26470768-26470838 7 81.5 3656 FBgn0039431 3110.826667 52.34666667 80.39 0.026198824 1.556928171 1.013807688 4 4 4 0.1 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 3R 26472059 26472066 - 3R_26472059_26472066_- 0.674980972 0.674981489 0.674981231 3.54E-07 plum FBtr0302210|FBtr0305049|FBtr0302209|FBtr0344120 26471101|26470076|26471101|26471101 26472978|26472978|26472978|26472978 3R - 26472042 26472123 3'utr plum FlyBase G54845.1 AATTTCCGCATATTTACTGCTGCATTTTGTTTTGTTTACACAACCGATATATCAAATGTACCTGATTATATTCATTTTGCAT 674 26472067 0.985346554 9 664 5491 0.989384289 2.492294658 0.527600849 0.24925816 0.462845011 674 8 2 932 3R:26472042-26472123 8 plum FBtr0302210|FBtr0305049|FBtr0302209|FBtr0344120 26471101|26470076|26471101|26471101 26472978|26472978|26472978|26472978 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R - 26472044 26472092 3'utr plum FlyBase G41400.1 TTGTTTACACAACCGATATATCAAATGTACCTGATTATATTCATTTTGC 448 26472067 0.847330742 8 439 3595 0.98694517 2.878521796 0.54308094 0.407158837 0.654046997 447 10 0 756 3R:26472044-26472092 8 557.5 3657 FBgn0039431 3110.826667 52.34666667 80.39 0.179212814 10.65015283 6.934942157 1 1 1 0.1 dme-miR-282-5p 6mer2-7 GAGGCT 3R 26472560 26472565 - 3R_26472560_26472565_- 0.999983334 0.999981234 0.999982284 1.48E-06 plum FBtr0302210|FBtr0305049|FBtr0302209|FBtr0344120 26471101|26470076|26471101|26471101 26472978|26472978|26472978|26472978 3R - 26472541 26472583 3'utr plum FlyBase G54846.1 TTGTTTTTTTCGTTAATTGAGGCTCATTTTTACATGTAACTTT 85 26472567 0.837523237 7 85 883 1 2.041392685 0.127272727 0.223529412 0.4 85 0 0 110 3R:26472541-26472583 6 plum FBtr0302210|FBtr0305049|FBtr0302209|FBtr0344120 26471101|26470076|26471101|26471101 26472978|26472978|26472978|26472978 GAGGCT 6mer2-7 dme-miR-282-5p 3R - 26472540 26472586 3'utr plum FlyBase G41401.1 TGTTTGTTTTTTTCGTTAATTGAGGCTCATTTTTACATGTAACTTTT 70 26472567 0.83958246 6 68 721 0.969072165 1.973127854 0.164948454 0.271428571 0.474226804 70 3 0 94 3R:26472540-26472586 6 77.5 3658 FBgn0039431 3110.826667 52.34666667 80.39 0.024912992 1.480514519 0.964050255 2 2 2 0.1 dme-miR-190-5p 6mer3-8 ACATAT 3R 26472687 26472692 - 3R_26472687_26472692_- 0.999999948 0.843051958 0.921525953 0.110978924 plum FBtr0302210|FBtr0305049|FBtr0302209|FBtr0344120 26471101|26470076|26471101|26471101 26472978|26472978|26472978|26472978 3R - 26472653 26472781 3'utr plum FlyBase G54848.1 ACATTTTATAAATGTAAATATTTAGTAACTGAAACTATGGAACTATGGGAGAAATGATTAATTAAGCTAATATTTATACACATGTATCTACATATGTACACTCGTATACAGAACACGTACGCTAAGTTG 43 26472687 0.932813065 19 41 284 0.961538462 1.698970004 0.019230769 0.162790698 0.307692308 43 2 0 50 3R:26472653-26472781 6 plum FBtr0302210|FBtr0305049|FBtr0302209|FBtr0344120 26471101|26470076|26471101|26471101 26472978|26472978|26472978|26472978 ACATAT 6mer3-8 dme-miR-190-5p 3R - 26472653 26472707 3'utr plum FlyBase G41402.1 TATACACATGTATCTACATATGTACACTCGTATACAGAACACGTACGCTAAGTTG 9 26472687 0.981079602 3 7 59 0.928571429 1.113943352 0 0.5 0.714285714 8 1 0 13 3R:26472653-26472707 6 8.5 3659 FBgn0039431 3110.826667 52.34666667 80.39 0.002732393 0.162379012 0.105734544 -5 -5 -5 0.1 dme-miR-8-3p 7mer-m8 CAGTATT 3R 26472966 26472972 - 3R_26472966_26472972_- 0.643728436 0.657494163 0.6506113 0.009733891 plum FBtr0302210|FBtr0305049|FBtr0302209|FBtr0344120 26471101|26470076|26471101|26471101 26472978|26472978|26472978|26472978 3R - 26472934 26473004 stop_codon plum FlyBase G54850.1 GAGCCCAGGTGGATCCCAATGGGTGAAGCAAGCAGTATTTTTATGAAGCTACAACATAGAAGCAAGCAAAA 11 26472965 0.982692912 6 9 66 0.818181818 0.653212514 0.272727273 0 0 11 1 1 9 3R:26472934-26473004 7 plum FBtr0302210|FBtr0305049|FBtr0302209|FBtr0344120 26471101|26470076|26471101|26471101 26472978|26472978|26472978|26472978 CAGTATT 7mer-m8 dme-miR-8-3p 3R - 26472936 26473005 stop_codon plum FlyBase G41404.1 CGAGCCCAGGTGGATCCCAATGGGTGAAGCAAGCAGTATTTTTATGAAGCTACAACATAGAAGCAAGCAA 11 26472965 0.98220307 6 10 67 0.8 1.204119983 0.35 0.545454545 0.75 11 4 0 16 3R:26472936-26473005 7 7.5 3660 FBgn0039431 3110.826667 52.34666667 80.39 0.002410935 0.143275599 0.093295186 -7 -7 -7 0.1 dme-miR-986-5p 7mer-A1 TTCGAGA 3R 26594944 26594950 + 3R_26594944_26594950_+ 0.823349531 0.823349428 0.823349479 7.07E-08 scrib FBtr0308622|FBtr0308620|FBtr0335522|FBtr0308621|FBtr0308625 26594814|26594814|26594814|26594814|26594814 26595018|26596188|26596188|26596188|26596188 3R + 26594919 26594954 3'utr scrib FlyBase G46052.1 AGTGTTTATTTCGAACGAGACTTTTTTCGAGACTAA 7 26594942 0.730538459 2 6 49 0.875 0.84509804 0.25 0.142857143 0.25 7 1 0 7 3R:26594919-26594954 7 scrib FBtr0308625|FBtr0308621|FBtr0335522|FBtr0308620|FBtr0308622 26594814|26594814|26594814|26594814|26594814 26596188|26596188|26596188|26596188|26595018 TTCGAGA 7mer-A1 dme-miR-986-5p 3R + 26594926 26594959 3'utr scrib FlyBase G34742.1 ATTTCGAACGAGACTTTTTTCGAGACTAAGCTAC 8 26594942 0.975840858 3 7 52 1 0.954242509 0.222222222 0.125 0.222222222 8 0 0 9 3R:26594926-26594959 7 6.5 3661 FBgn0263289 2418.266667 41.02 62.81333333 0.002687876 0.158459288 0.103481214 2 2 2 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 26595943 26595948 + 3R_26595943_26595948_+ 0.999967865 0.999959282 0.999963574 6.08E-06 scrib FBtr0308620|FBtr0308620|FBtr0308620|FBtr0335522|FBtr0335522|FBtr0335522|FBtr0308621|FBtr0308621|FBtr0308621|FBtr0308625|FBtr0308625|FBtr0308625 26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814 26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188 3R + 26595928 26595993 3'utr scrib FlyBase G46054.1 TTTATATGTTAATATCTGTGAACAAAGCAACCACATAAATAAGAACTGCTTAACGATGTATTAAAA 85 26595942 0.794530027 8 83 489 0.981132075 2.017033339 0.132075472 0.188235294 0.349056604 85 2 0 104 3R:26595928-26595993 6 scrib FBtr0308625|FBtr0308625|FBtr0308625|FBtr0308621|FBtr0308621|FBtr0308621|FBtr0335522|FBtr0335522|FBtr0335522|FBtr0308620|FBtr0308620|FBtr0308620 26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814 26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 26595931 26596014 3'utr scrib FlyBase G34743.1 ATATGTTAATATCTGTGAACAAAGCAACCACATAAATAAGAACTGCTTAACGATGTATTAAAATAACTACTGACTACGGTTATG 36 26595942 0.769942051 8 32 207 0.928571429 1.716003344 0.196428571 0.416666667 0.625 36 4 0 52 3R:26595931-26596014 6 49 3662 FBgn0263289 2418.266667 41.02 62.81333333 0.020262447 1.194539249 0.780089153 1 1 1 0.1 dme-miR-263a-5p 8mer-A1 GTGCCATA 3R 26596098 26596105 + 3R_26596098_26596105_+ 0.617210098 0.623640606 0.620425352 0.00454705 scrib FBtr0308620|FBtr0335522|FBtr0308621|FBtr0308625 26594814|26594814|26594814|26594814 26596188|26596188|26596188|26596188 3R + 26596043 26596121 3'utr scrib FlyBase G46055.1 CCATTACCATTACTATTATTAATCATCCACATATGTACGTATTTGTCATCGATTTGTGCCATACATATTTTATGTAACT 19 26596096 0.806837107 7 16 178 0.913043478 1.322219295 0 0.210526316 0.347826087 19 2 0 21 3R:26596043-26596121 8 scrib FBtr0308625|FBtr0308621|FBtr0335522|FBtr0308620 26594814|26594814|26594814|26594814 26596188|26596188|26596188|26596188 GTGCCATA 8mer-A1 dme-miR-263a-5p 3R + 26596081 26596122 3'utr scrib FlyBase G34744.1 GTATTTGTCATCGATTTGTGCCATACATATTTTATGTAACTC 20 26596097 0.739332137 6 20 184 1 1.447158031 0 0.3 0.5 20 0 0 28 3R:26596081-26596122 8 17.5 3663 FBgn0263289 2418.266667 41.02 62.81333333 0.007236588 0.42662116 0.278603269 2 1 1.5 0.1 dme-miR-13b-2-5p 6mer2-7 TTGACG 3R 26715618 26715623 - 3R_26715618_26715623_- 0.797728168 0.863604326 0.830666247 0.046581437 CG6425 FBtr0085047 26715163 26716018 3R - 26715604 26715657 3'utr CG6425 FlyBase G54860.1 AGGTGGATACGACTGGTCGCCGACAGGCAGTGAATTGACGTCCCCCGGTTGAGC 12 26715623 0.928727298 3 12 43 1 1.079181246 0.083333333 0 0 12 0 0 12 3R:26715604-26715657 6 CG6425 FBtr0085047 26715163 26716018 TTGACG 6mer2-7 dme-miR-13b-2-5p 3R - 26715597 26715645 3'utr CG6425 FlyBase G41413.1 CTGGTCGCCGACAGGCAGTGAATTGACGTCCCCCGGTTGAGCTTTCATT 8 26715623 0.94651519 3 8 41 1 1.146128036 0.357142857 0.625 0.785714286 8 0 0 14 3R:26715597-26715645 6 9 3664 FBgn0039449 117.6666667 6.803333333 10.38 0.076487252 1.322880941 0.867052023 0 0 0 0.1 dme-miR-2a-2-5p 7mer-m8 TGATGAG 3R 26715952 26715958 - 3R_26715952_26715958_- 0.444059674 0.43025108 0.437155377 0.009764155 CG6425 FBtr0085047 26715163 26716018 3R - 26715933 26716009 3'utr CG6425 FlyBase G54861.1 AGGTAACCAGCCCCTGAATACAATCAGCTTCCCTTCAGCGAGTACCAATTGTGATGAGCAAAGTTAGAGTTTAAGAT 76 26715961 0.748998765 8 70 433 0.936170213 1.245512668 0.489361702 0.184210526 0.340425532 76 2 4 88 3R:26715933-26716009 7 CG6425 FBtr0085047 26715163 26716018 TGATGAG 7mer-m8 dme-miR-2a-2-5p 3R - 26715883 26716002 3'utr CG6425 FlyBase G41414.1 CAGCCCCTGAATACAATCAGCTTCCCTTCAGCGAGTACCAATTGTGATGAGCAAAGTTAGAGTTTAAGATATTTCGTTTTGTTTCGCTTGACTTGCGTGCCCCCTTGCCTGAGCATTCTG 77 26715961 0.764524821 13 72 454 0.933333333 1.204119983 0.425 0.402597403 0.616666667 77 2 6 112 3R:26715883-26716002 7 61.5 3665 FBgn0039449 117.6666667 6.803333333 10.38 0.52266289 9.039686428 5.924855491 3 3 3 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 26720703 26720708 - 3R_26720703_26720708_- 0.994217484 0.996999661 0.995608572 0.001967312 CG6420 FBtr0339242|FBtr0085046 26719845|26720322 26720787|26720787 3R - 26720649 26720839 stop_codon CG6420 FlyBase G54869.1 TCAGCACTTGTCACCTGGACAGGCGGCGGCGCCCGGCGGGACGGTAATTTAGTTCAATAAAGTGGACTTGGTCAACTATCAGCGTAATCTTGTCAAGCAGCAGGAGCAGGAGCAGCAACAGAAGCAGTCGGTGATCTAGGTTAAAGCTAGGCGATTGATTTCGGTAATTTATTGATAGGAGCAAGAGTTTT 301 26720703 0.967087235 27 292 1627 0.973837209 2.224014811 0.212209302 0.119601329 0.229651163 301 8 1 335 3R:26720649-26720839 6 CG6420 FBtr0339242|FBtr0085046 26719845|26720322 26720787|26720787 TGATCT 6mer3-8 dme-bantam-3p 3R - 26720657 26720798 stop_codon CG6420 FlyBase G41419.1 CGGTAATTTAGTTCAATAAAGTGGACTTGGTCAACTATCAGCGTAATCTTGTCAAGCAGCAGGAGCAGGAGCAGCAACAGAAGCAGTCGGTGATCTAGGTTAAAGCTAGGCGATTGATTTCGGTAATTTATTGATAGGAGCA 195 26720703 0.964444557 16 191 999 0.98392283 2.485721426 0.199356913 0.405128205 0.627009646 195 5 0 306 3R:26720657-26720798 6 212.5 3666 FBgn0039451 839.37 25.00666667 38.08 0.253166065 8.497733938 5.580357143 -5 -5 -5 0.1 dme-miR-980-3p 6mer3-8 GGCAGC 3R 26784976 26784981 + 3R_26784976_26784981_+ 0.999997243 0.999997347 0.999997295 7.07E-08 CG42790 FBtr0310469 26784837 26785753 3R + 26784960 26784994 3'utr CG42790 FlyBase G46066.1 ACACACCCATCTATTTGGCAGCCAGACTTTGATTC 15 26784974 0.723764838 3 14 78 0.941176471 1.204119983 0 0.133333333 0.235294118 15 1 0 16 3R:26784960-26784994 6 CG42790 FBtr0310469 26784837 26785753 GGCAGC 6mer3-8 dme-miR-980-3p 3R + 26784961 26784988 3'utr CG42790 FlyBase G34754.1 CACACCCATCTATTTGGCAGCCAGACTT 6 26784974 0.945017399 2 6 28 1 1 0 0.5 0.7 6 0 0 10 3R:26784961-26784988 6 10.5 3667 FBgn0261861 0.333333333 0.033333333 0.05 31.5 315 210 2 2 2 0.1 dme-miR-34-5p 8mer-A1 CACTGCCA 3R 26841228 26841235 + 3R_26841228_26841235_+ 0.678403876 0.531695931 0.605049904 0.103738222 Tl FBtr0085059|FBtr0330154|FBtr0330155 26841146|26841206|26841146 26842403|26842403|26841915 3R + 26841211 26841253 3'utr Tl FlyBase G46077.1 GAAGCCTCCAAGAAGAACACTGCCACTGACGAGGCGGCGGTGA 10 26841237 0.811200197 2 8 17 0.9 0.954242509 0.3 0 0 10 1 0 9 3R:26841211-26841253 8 Tl FBtr0330155|FBtr0085059|FBtr0330154 26841146|26841146|26841206 26841915|26842403|26842403 CACTGCCA 8mer-A1 dme-miR-34-5p 3R + 26841161 26841252 stop_codon Tl FlyBase G34760.1 CGGAGCTGTTTCAGTTCGATCCCGACGATGAGCTATTGTTCCGTTAAAGAGAAGCCTCCAAGAAGAACACTGCCACTGACGAGGCGGCGGTG 10 26841237 0.997484775 4 9 43 0.947368421 1.255272505 0.473684211 0.3 0.631578947 10 1 0 18 3R:26841161-26841252 8 7.5 3668 FBgn0262473 3258.3 76.28333333 116.6733333 0.002301814 0.098317675 0.064282041 -9 -9 -9 0.1 dme-miR-980-5p 6mer2-7 AAAAAC 3R 26842188 26842193 + 3R_26842188_26842193_+ 0.64552863 0.999071203 0.822299917 0.24999237 Tl FBtr0085059|FBtr0330154 26841146|26841206 26842403|26842403 3R + 26842146 26842239 3'utr Tl FlyBase G46082.2 CATGTCATCTACCAAACAATTAGGCTAGCTCTTCATCCATACAAAAACCAGAATGAATATCGTCTATGATACGTAAATGTAATTAAGCTAAACT 43 26842165 0.834257186 12 40 264 0.96 1.681241237 0.1 0.162790698 0.28 43 2 0 48 3R:26842146-26842239 6 Tl FBtr0085059|FBtr0330154 26841146|26841206 26842403|26842403 AAAAAC 6mer2-7 dme-miR-980-5p 3R + 26842143 26842236 3'utr Tl FlyBase G34764.1 TATCATGTCATCTACCAAACAATTAGGCTAGCTCTTCATCCATACAAAAACCAGAATGAATATCGTCTATGATACGTAAATGTAATTAAGCTAA 26 26842199 0.973396224 6 25 154 0.975609756 1.602059991 0.024390244 0.461538462 0.658536585 26 1 0 40 3R:26842143-26842236 6 8.5 3669 FBgn0262473 3258.3 76.28333333 116.6733333 0.002608722 0.111426699 0.07285298 23 -11 6 0.1 dme-miR-252-5p 7mer-m8 GTACTTA 3R 26842575 26842581 - 3R_26842575_26842581_- 0.588292732 0.588293651 0.588293192 7.07E-07 Lerp FBtr0334310|FBtr0085099|FBtr0300939|FBtr0085097 26842460|26842460|26842460|26842460 26843181|26843181|26843181|26843181 3R - 26842554 26842706 3'utr Lerp FlyBase G54881.1 ATAACCAGTATAGCGCAGCAGCTTTTTCCTTCCATAAAAGATGTGATTTCATTTTTAAAACTTTCAAGTGCAGCTTGTTAGTGGTATTCCTTTGAAACGATTTGTATTTTACTCTAAGGCAATCTGTACTTACATTTATGTTTGTGTCTTGAG 126 26842582 0.978177495 19 122 1114 0.962962963 2.193124598 0.080246914 0.246031746 0.413580247 126 6 0 156 3R:26842554-26842706 7 Lerp FBtr0334310|FBtr0085099|FBtr0300939|FBtr0085097 26842460|26842460|26842460|26842460 26843181|26843181|26843181|26843181 GTACTTA 7mer-m8 dme-miR-252-5p 3R - 26842533 26842705 3'utr Lerp FlyBase G41428.1 TAACCAGTATAGCGCAGCAGCTTTTTCCTTCCATAAAAGATGTGATTTCATTTTTAAAACTTTCAAGTGCAGCTTGTTAGTGGTATTCCTTTGAAACGATTTGTATTTTACTCTAAGGCAATCTGTACTTACATTTATGTTTGTGTCTTGAGTTGTTTTTAGTTCAATAAGGC 80 26842582 0.987529309 15 78 706 0.982300885 2.045322979 0.03539823 0.3 0.504424779 80 2 0 111 3R:26842533-26842705 7 39 3670 FBgn0051072 373.47 12.92333333 19.75 0.104426058 3.017797266 1.974683544 1 1 1 0.1 dme-miR-1007-3p 6mer3-8 TGAGCT 3R 26842997 26843002 - 3R_26842997_26843002_- 0.828586099 0.922644908 0.875615504 0.066509615 Lerp FBtr0334310|FBtr0085099|FBtr0300939|FBtr0085097 26842460|26842460|26842460|26842460 26843181|26843181|26843181|26843181 3R - 26842961 26843033 3'utr Lerp FlyBase G54884.1 AGAAGACATTACTGAAAACTGGAACTGATTGTGAGCTAAACAAACCAATTGAAAACTAAAGAAAACCGTAGTA 39 26843005 0.962489045 8 37 187 0.94 1.371067862 0.12 0.256410256 0.42 39 2 1 47 3R:26842961-26843033 6 Lerp FBtr0334310|FBtr0085099|FBtr0300939|FBtr0085097 26842460|26842460|26842460|26842460 26843181|26843181|26843181|26843181 TGAGCT 6mer3-8 dme-miR-1007-3p 3R - 26842959 26843023 3'utr Lerp FlyBase G41431.1 ACTGAAAACTGGAACTGATTGTGAGCTAAACAAACCAATTGAAAACTAAAGAAAACCGTAGTAGA 33 26843005 0.958388219 8 30 156 0.9375 1.176091259 0.083333333 0.303030303 0.520833333 33 1 2 45 3R:26842959-26843023 6 27.5 3671 FBgn0051072 373.47 12.92333333 19.75 0.073633759 2.12793397 1.392405063 3 3 3 0.1 dme-miR-932-5p 6mer2-7 GAATTG 3R 26868988 26868993 + 3R_26868988_26868993_+ 0.998313293 0.998505633 0.998409463 0.000135977 His2Av FBtr0334311 26868585 26869220 3R + 26868983 26869044 3'utr His2Av FlyBase G46093.1 GTAAAGAATTGCAACTACATAGATGGTAATTAATTTCAGCTGTAAGAAGTACAAGTTTTTCA 15 26868991 0.919949959 5 14 102 0.875 1.146128036 0.0625 0.066666667 0.125 15 2 0 14 3R:26868983-26869044 6 His2Av FBtr0334311 26868585 26869220 GAATTG 6mer2-7 dme-miR-932-5p 3R + 26868968 26869069 3'utr His2Av FlyBase G34774.1 CTTGTGTCGATGAATGTAAAGAATTGCAACTACATAGATGGTAATTAATTTCAGCTGTAAGAAGTACAAGTTTTTCATAATTGTGAGAAAAGTGCAGTAGTA 13 26868991 0.976481393 10 13 79 1 1.342422681 0.181818182 0.384615385 0.636363636 13 0 0 22 3R:26868968-26869069 6 8 3672 FBgn0001197 5513.57 740.2033333 1128.183333 0.001450966 0.010807841 0.007091046 -3 -3 -3 0.1 dme-miR-14-3p 7mer-A1 AGACTGA 3R 26869202 26869208 + 3R_26869202_26869208_+ 0.823349562 0.823347731 0.823348646 1.34E-06 His2Av FBtr0334311 26868585 26869220 3R + 26869164 26869223 3'utr His2Av FlyBase G46096.1 CACAACTGTAGCTTTTCATCCGAAAGATAATAATGAATAGACTGACCTGACGTTTTTCAA 20 26869200 0.958613419 6 19 95 0.96875 1.491361694 0.46875 0.4 0.625 20 1 0 31 3R:26869164-26869223 7 His2Av FBtr0334311 26868585 26869220 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 26869170 26869216 3'utr His2Av FlyBase G34775.1 TGTAGCTTTTCATCCGAAAGATAATAATGAATAGACTGACCTGACGT 10 26869201 0.704427486 7 9 51 0.882352941 1.176091259 0.294117647 0.6 0.764705882 10 2 0 15 3R:26869170-26869216 7 12.5 3673 FBgn0001197 5513.57 740.2033333 1128.183333 0.002267134 0.016887252 0.011079759 2 1 1.5 0.1 dme-bantam-3p 7mer-A1 GATCTCA 3R 26872393 26872399 - 3R_26872393_26872399_- 0.823348261 0.823349562 0.823348912 9.19E-07 Rb97D FBtr0085093 26872127 26873864 3R - 26872373 26872420 3'utr Rb97D FlyBase G54913.1 TCGTAAGGTAAGTTAGTAACGGATCTCATCTAGGATAAACTAGAGTTT 35 26872391 0.690347602 6 32 251 0.923076923 1.255272505 0.128205128 0.114285714 0.205128205 35 2 1 36 3R:26872373-26872420 7 Rb97D FBtr0085093 26872127 26873864 GATCTCA 7mer-A1 dme-bantam-3p 3R - 26872371 26872420 3'utr Rb97D FlyBase G41456.1 TCGTAAGGTAAGTTAGTAACGGATCTCATCTAGGATAAACTAGAGTTTTT 23 26872391 0.697244343 8 23 161 1 1.531478917 0.117647059 0.47826087 0.647058824 23 0 0 34 3R:26872371-26872420 7 28.5 3674 FBgn0004903 1478.54 66.86666667 102.46 0.019275772 0.426221336 0.27815733 -8 -8 -8 0.1 dme-miR-932-5p 7mer-A1 GAATTGA 3R 26872736 26872742 - 3R_26872736_26872742_- 0.805380872 0.777543665 0.791462269 0.019683873 Rb97D FBtr0100336|FBtr0100334|FBtr0085092|FBtr0085093|FBtr0100335|FBtr0100340|FBtr0100338|FBtr0100337 26872581|26872581|26872581|26872127|26872581|26872581|26872581|26872581 26873961|26873864|26873864|26873864|26873961|26873864|26873864|26873864 3R - 26872717 26872813 3'utr Rb97D FlyBase G54915.1 GGATTAACTAGACTTACGATTTATTCTCGACTCTCTCCTATTATTAAGCTGTTGTGCACGCCAAGGGCTTTGAATTGATCTTTATATATAATGCAGT 25 26872739 0.901085019 9 22 230 0.857142857 1.380211242 0.392857143 0.12 0.214285714 25 4 0 24 3R:26872717-26872813 7 Rb97D FBtr0100337|FBtr0100338|FBtr0100340|FBtr0100335|FBtr0085093|FBtr0085092|FBtr0100334|FBtr0100336 26872581|26872581|26872581|26872581|26872127|26872581|26872581|26872581 26873864|26873864|26873864|26873961|26873864|26873864|26873864|26873961 GAATTGA 7mer-A1 dme-miR-932-5p 3R - 26872712 26872768 3'utr Rb97D FlyBase G41457.1 AAGCTGTTGTGCACGCCAAGGGCTTTGAATTGATCTTTATATATAATGCAGTACTGA 27 26872739 0.767320575 8 23 247 0.789473684 1.176091259 0.263157895 0.259259259 0.473684211 27 7 1 30 3R:26872712-26872768 7 19.5 3675 FBgn0004903 1478.54 66.86666667 102.46 0.013188686 0.291625125 0.190318173 -3 -3 -3 0.1 dme-miR-190-5p 6mer3-8 ACATAT 3R 26910995 26911000 - 3R_26910995_26911000_- 0.870600643 0.994422536 0.932511589 0.087555305 Ets97D FBtr0085088 26910773 26911111 3R - 26910995 26911064 stop_codon Ets97D FlyBase G54927.2 CGAGGAGCCTTAGCGTTGGCTGACTTGGTCGGATGACGGCGCCTGGTTAATAATACAAATTGTTACATAT 54 26911015 0.754751748 9 51 396 0.948275862 1.740362689 0.224137931 0.055555556 0.120689655 54 3 0 55 3R:26910995-26911064 5 Ets97D FBtr0330167|FBtr0085088 26910773|26910773 26911051|26911111 ACATAT 6mer3-8 dme-miR-190-5p 3R - 26910998 26911041 3'utr Ets97D FlyBase G41469.1 CTTGGTCGGATGACGGCGCCTGGTTAATAATACAAATTGTTACA 21 26911015 0.716738247 6 18 160 0.90625 0.985276743 0.0625 0.428571429 0.625 21 1 2 29 3R:26910998-26911041 2 4 3676 FBgn0004510 520.3433333 34.19 52.35333333 0.007687232 0.116993273 0.076403922 15 15 15 0.1 dme-miR-8-3p 6mer3-8 CAGTAT 3R 26950357 26950362 - 3R_26950357_26950362_- 0.999999962 0.999999943 0.999999952 7.07E-08 CG6330 FBtr0085085|FBtr0085084 26950121|26949690 26950424|26950424 3R - 26950270 26950379 3'utr CG6330 FlyBase G54933.1 ATATGTGCGCATCTCTCCAGTATACAATGATGTTTCAACATTCCCTAGTTTAGCTCTGATTAAGTTCCTAGCTTTATTTCTGTGTATATCGCCCACAACCTCATCGGATA 19 26950352 0.78842745 9 17 135 0.961538462 1.397940009 0.153846154 0.315789474 0.5 19 1 0 25 3R:26950270-26950379 6 CG6330 FBtr0085085|FBtr0085084 26950121|26949690 26950424|26950424 CAGTAT 6mer3-8 dme-miR-8-3p 3R - 26950270 26950384 3'utr CG6330 FlyBase G41474.1 ACATTATATGTGCGCATCTCTCCAGTATACAATGATGTTTCAACATTCCCTAGTTTAGCTCTGATTAAGTTCCTAGCTTTATTTCTGTGTATATCGCCCACAACCTCATCGGATA 16 26950364 0.98081386 10 15 109 0.933333333 1.447158031 0.166666667 0.625 0.8 16 2 0 28 3R:26950270-26950384 6 9 3677 FBgn0039464 58.00333333 3.87 5.813333333 0.155163496 2.325581395 1.548165138 -10 2 -4 0.1 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 26961441 26961447 - 3R_26961441_26961447_- 0.765952287 0.702320895 0.734136591 0.044994194 Tsp97E FBtr0344665|FBtr0336726|FBtr0344664|FBtr0273310 26961062|26961399|26961399|26961062 26962355|26962355|26963005|26963005 3R - 26961412 26961473 3'utr Tsp97E FlyBase G54943.1 ATTAGATAATATTCTCTGTATTCTGTGCTGTGATTGAAGTAAATATGATCTTTAAAACAACA 80 26961450 0.8333937 7 78 767 0.979591837 1.982271233 0.091836735 0.175 0.326530612 80 2 0 96 3R:26961412-26961473 7 Tsp97E FBtr0344664|FBtr0273310|FBtr0336726|FBtr0344665 26961399|26961062|26961399|26961062 26963005|26963005|26962355|26962355 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R - 26961416 26961475 3'utr Tsp97E FlyBase G41480.1 CCATTAGATAATATTCTCTGTATTCTGTGCTGTGATTGAAGTAAATATGATCTTTAAAAC 77 26961450 0.704298682 10 75 741 0.982142857 1.740362689 0.125 0.337662338 0.544642857 77 1 1 110 3R:26961416-26961475 7 72.5 3678 FBgn0039465 1547.256667 107.7333333 165.9533333 0.046857126 0.672957921 0.436869803 3 3 3 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 26961931 26961936 - 3R_26961931_26961936_- 0.999995 1 0.9999975 3.54E-06 Tsp97E FBtr0344665|FBtr0085082|FBtr0336726|FBtr0344664|FBtr0273310 26961062|26961723|26961399|26961399|26961062 26962355|26962355|26962355|26963005|26963005 3R - 26961891 26961952 3'utr Tsp97E FlyBase G54945.1 AAACATTTCAACAACCTGATCTTACTGTAGAACTAACAACCAGTCAACAATTGTAACTAGCA 25 26961936 0.986643653 4 21 179 0.866666667 0.716003344 0 0.16 0.3 25 0 4 26 3R:26961891-26961952 6 Tsp97E FBtr0344664|FBtr0273310|FBtr0085082|FBtr0336726|FBtr0344665 26961399|26961062|26961723|26961399|26961062 26963005|26963005|26962355|26962355|26962355 TGATCT 6mer3-8 dme-bantam-3p 3R - 26961913 26961957 3'utr Tsp97E FlyBase G41482.1 GAGACAAACATTTCAACAACCTGATCTTACTGTAGAACTAACAAC 20 26961936 0.7814658 5 18 133 0.90625 0.860338007 0.09375 0.4 0.625 20 0 3 29 3R:26961913-26961957 6 22 3679 FBgn0039465 1547.256667 107.7333333 165.9533333 0.014218714 0.204207921 0.132567388 0 0 0 0.1 dme-miR-304-5p 8mer-A1 TGAGATTA 3R 26962097 26962104 - 3R_26962097_26962104_- 0.625362636 0.62536254 0.625362588 7.07E-08 Tsp97E FBtr0344665|FBtr0085082|FBtr0336726|FBtr0344664|FBtr0273310 26961062|26961723|26961399|26961399|26961062 26962355|26962355|26962355|26963005|26963005 3R - 26962078 26962130 3'utr Tsp97E FlyBase G54947.1 ATGTTATTTAATTACAAAACCTCCATTGAGATTATGTTTAGATGTAATAATGT 59 26962105 0.932759732 5 57 562 0.985294118 1.826074803 0.029411765 0.13559322 0.25 59 1 0 67 3R:26962078-26962130 8 Tsp97E FBtr0344664|FBtr0273310|FBtr0085082|FBtr0336726|FBtr0344665 26961399|26961062|26961723|26961399|26961062 26963005|26963005|26962355|26962355|26962355 TGAGATTA 8mer-A1 dme-miR-304-5p 3R - 26962014 26962121 3'utr Tsp97E FlyBase G41483.1 AATTACAAAACCTCCATTGAGATTATGTTTAGATGTAATAATGTAATCTAAGTTTAACCGTTTAAAAGTCCTTAGTTAGCTCTTAATGCCTTTCTTTGCAACTCGCAA 45 26962105 0.834999223 12 45 406 1 1.886490725 0.077922078 0.488888889 0.701298701 45 0 0 77 3R:26962014-26962121 8 47.5 3680 FBgn0039465 1547.256667 107.7333333 165.9533333 0.030699496 0.440903465 0.286225043 1 1 1 0.1 dme-miR-965-3p 7mer-m8 TACGCTT 3R 26977159 26977165 + 3R_26977159_26977165_+ 0.620204135 0.620204841 0.620204488 4.95E-07 CG5521 FBtr0301134|FBtr0085069 26976544|26976544 26977878|26977878 3R + 26977135 26977180 3'utr CG5521 FlyBase G46133.1 TTTCTTTCCTTTTATGTCACATTTTACGCTTGGCCACAAGACGCAA 32 26977158 0.975931853 2 32 236 1 1.579783597 0.026315789 0.1875 0.315789474 32 0 0 38 3R:26977135-26977180 7 CG5521 FBtr0301134|FBtr0085069 26976544|26976544 26977878|26977878 TACGCTT 7mer-m8 dme-miR-965-3p 3R + 26977146 26977183 3'utr CG5521 FlyBase G34797.1 TTATGTCACATTTTACGCTTGGCCACAAGACGCAAATT 25 26977158 0.975116231 5 25 161 1 1.612783857 0.12195122 0.4 0.634146341 25 0 0 41 3R:26977146-26977183 7 28.5 3681 FBgn0039466 1133.8 17.58666667 26.86 0.025136708 1.620545868 1.061057334 1 1 1 0.1 dme-miR-8-3p 7mer-A1 AGTATTA 3R 26977290 26977296 + 3R_26977290_26977296_+ 0.576905992 0.622734391 0.599820191 0.032405572 CG5521 FBtr0301134|FBtr0085069 26976544|26976544 26977878|26977878 3R + 26977246 26977325 3'utr CG5521 FlyBase G46134.1 CATAGAAACTTGCTCTGCCCATTCAAAGCAAAACATCAACTACTAGTATTATGTAATCGAGCTATATGTATAGGTATAGG 13 26977267 0.970643767 7 13 77 1 1.204119983 0.1875 0.153846154 0.3125 13 0 0 16 3R:26977246-26977325 7 CG5521 FBtr0301134|FBtr0085069 26976544|26976544 26977878|26977878 AGTATTA 7mer-A1 dme-miR-8-3p 3R + 26977241 26977320 3'utr CG5521 FlyBase G34798.1 TCGAACATAGAAACTTGCTCTGCCCATTCAAAGCAAAACATCAACTACTAGTATTATGTAATCGAGCTATATGTATAGGT 11 26977281 0.977281985 7 10 71 0.944444444 1.230448921 0.166666667 0.363636364 0.611111111 11 1 0 17 3R:26977241-26977320 7 5.5 3682 FBgn0039466 1133.8 17.58666667 26.86 0.004850944 0.312736922 0.20476545 23 9 16 0.1 dme-miR-1003-3p 6mer2-7 TGTGAG 3R 26977395 26977400 + 3R_26977395_26977400_+ 1 0.99999973 0.999999865 2.12E-07 CG5521 FBtr0301134|FBtr0085069 26976544|26976544 26977878|26977878 3R + 26977353 26977416 3'utr CG5521 FlyBase G46135.1 TCCAAAACCCTATCAACTGTCGATGGCAATCGTCACTAGGAGTGTGAGTCTTAGAAAGGAAAAC 13 26977397 0.938369143 8 12 71 0.923076923 1.079181246 0.230769231 0 0 13 1 0 12 3R:26977353-26977416 6 CG5521 FBtr0301134|FBtr0085069 26976544|26976544 26977878|26977878 TGTGAG 6mer2-7 dme-miR-1003-3p 3R + 26977373 26977408 3'utr CG5521 FlyBase G34799.1 CGATGGCAATCGTCACTAGGAGTGTGAGTCTTAGAA 10 26977397 0.752140934 6 9 55 0.857142857 1.079181246 0.285714286 0.4 0.571428571 10 2 0 12 3R:26977373-26977408 6 7.5 3683 FBgn0039466 1133.8 17.58666667 26.86 0.006614923 0.426459439 0.279225614 -2 -2 -2 0.1 dme-miR-1007-3p 7mer-m8 TGAGCTT 3R 26985554 26985560 + 3R_26985554_26985560_+ 0.620200084 0.620154352 0.620177218 3.23E-05 CG14253 FBtr0085072|FBtr0085073|FBtr0085071|FBtr0085070|FBtr0085074|FBtr0331701 26985256|26985256|26985256|26985256|26985256|26985256 26985706|26985706|26985706|26985706|26985706|26985706 3R + 26985519 26985605 3'utr CG14253 FlyBase G46144.1 TATTGTTGCATACTCTTGGGCTTATAAGTTCAATCTGAGCTTGAAATATGCCTGGTTAGGCCACATTGTCCAGTCGATTCCTTTGAC 17 26985535 0.985374742 10 16 148 0.913043478 1.322219295 0.173913043 0.294117647 0.47826087 17 2 0 21 3R:26985519-26985605 7 CG14253 FBtr0085070|FBtr0085071|FBtr0085073|FBtr0085072|FBtr0331701|FBtr0085074 26985256|26985256|26985256|26985256|26985256|26985256 26985706|26985706|26985706|26985706|26985706|26985706 TGAGCTT 7mer-m8 dme-miR-1007-3p 3R + 26985507 26985586 3'utr CG14253 FlyBase G34806.1 CTACAATACCATTATTGTTGCATACTCTTGGGCTTATAAGTTCAATCTGAGCTTGAAATATGCCTGGTTAGGCCACATTG 16 26985534 0.941184812 9 15 145 0.954545455 1.322219295 0.136363636 0.3125 0.5 16 1 0 21 3R:26985507-26985586 7 5.5 3684 FBgn0039467 5123.18 287.6366667 442.6666667 0.001073552 0.019121345 0.012424699 19 20 19.5 0.1 dme-miR-980-5p 6mer3-8 GAAAAA 3R 27065047 27065052 - 3R_27065047_27065052_- 0.999195807 0.997723757 0.998459782 0.001040861 spz FBtr0114372|FBtr0112834 27064988|27064988 27065853|27065853 3R - 27064990 27065075 3'utr spz FlyBase G54968.1 AAGAAAGATAGAAATAACGATTTGAAAAATGTATGTTAAAAAAAGATAATGTATAATAAATGTATGCAAGTACATGCCAGCAAAGT 20 27065054 0.896865833 13 19 121 0.96 1.380211242 0.08 0.25 0.4 20 1 0 24 3R:27064990-27065075 6 spz FBtr0114372|FBtr0112834 27064988|27064988 27065853|27065853 GAAAAA 6mer3-8 dme-miR-980-5p 3R - 27064992 27065074 3'utr spz FlyBase G41496.1 AGAAAGATAGAAATAACGATTTGAAAAATGTATGTTAAAAAAAGATAATGTATAATAAATGTATGCAAGTACATGCCAGCAAA 13 27065027 0.956480641 8 11 67 0.8125 1.113943352 0 0.230769231 0.375 13 3 0 13 3R:27064992-27065074 6 7 3685 FBgn0003495 2700.523333 165.5533333 254.8866667 0.00259209 0.042282447 0.027463186 2 -25 -11.5 0.1 dme-miR-283-5p 7mer-m8 TGATATT 3R 27065806 27065812 - 3R_27065806_27065812_- 0.592737041 0.588299724 0.590518383 0.003137645 spz FBtr0114372|FBtr0112834 27064988|27064988 27065853|27065853 3R - 27065780 27065931 stop_codon spz FlyBase G54971.1 AGTGATGGCGAACTGGACGTGGTGCAGAATTCCTTCAAGATCCCTTCCTGCTGCAAGTGCGCGTTGAAGACTGGGTGATTCTGGAAAATGGGATTCTCCAGTCGATGGCTGCGACAATGTGATATTGAGGTGAGGCCACGATTTATTCGTAC 643 27065826 0.976300899 25 616 3948 0.950904393 1.662757832 0.288113695 0.161741835 0.303617571 643 23 15 736 3R:27065780-27065931 7 spz FBtr0114372|FBtr0085137|FBtr0085138|FBtr0085145|FBtr0085140|FBtr0085146|FBtr0112834|FBtr0085139 27064988|27065086|27065086|27065086|27065086|27065086|27064988|27065086 27065853|27065853|27065853|27065853|27065853|27065853|27065853|27065853 TGATATT 7mer-m8 dme-miR-283-5p 3R - 27065792 27065883 stop_codon spz FlyBase G41500.1 TGCTGCAAGTGCGCGTTGAAGACTGGGTGATTCTGGAAAATGGGATTCTCCAGTCGATGGCTGCGACAATGTGATATTGAGGTGAGGCCACG 458 27065826 0.851919049 19 428 2742 0.949567723 1.915795428 0.282420749 0.366812227 0.582132565 458 28 7 659 3R:27065792-27065883 7 325 3686 FBgn0003495 2700.523333 165.5533333 254.8866667 0.120347044 1.963113599 1.275076505 14 14 14 0.1 dme-miR-277-3p 6mer3-8 TGCATT 3R 27108505 27108510 - 3R_27108505_27108510_- 0.969693744 0.965194949 0.967444346 0.003181132 gb FBtr0345216|FBtr0085132 27108465|27108465 27108996|27108996 3R - 27108482 27108614 3'utr gb FlyBase G55019.1 AGGTCGATATTTGCCATATAAAGCAGTTTCATATAATCTTCTGTTGCTTATTGTTTAAAAATTCGGTTATTGTTTTTGTCCCTCATTTTACTACCTAAGTGCATTGCATTGCAGTTTGTAATAAAGATTTTTG 22 27108511 0.964346814 11 20 213 0.888888889 1.380211242 0.148148148 0.181818182 0.333333333 22 3 0 24 3R:27108482-27108614 6 gb FBtr0345216|FBtr0085132 27108465|27108465 27108996|27108996 TGCATT 6mer3-8 dme-miR-277-3p 3R - 27108488 27108544 3'utr gb FlyBase G41542.1 TGTTTTTGTCCCTCATTTTACTACCTAAGTGCATTGCATTGCAGTTTGTAATAAAGA 10 27108511 0.81312508 6 10 93 1 1.079181246 0.166666667 0.2 0.333333333 10 0 0 12 3R:27108488-27108544 6 6.5 3687 FBgn0039487 624.3633333 28.60666667 43.79 0.010410605 0.227219762 0.148435716 1 1 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 27108858 27108863 - 3R_27108858_27108863_- 0.988707633 0.98879442 0.988751026 6.14E-05 gb FBtr0345216|FBtr0085132 27108465|27108465 27108996|27108996 3R - 27108779 27108899 3'utr gb FlyBase G55021.1 TTGAGAACGAGAAAGCTTGGCTCGTTAAACCTGAATACCAAAAAACGAAAATACCTAAAAAAGCGGAAAACATGACCTGTACATCACAAGGACTGGAGAACGAAGTCAATACTATCATATT 146 27108864 0.939424342 17 122 426 0.938547486 1.748188027 0.117318436 0.179310345 0.335195531 145 9 2 168 3R:27108779-27108899 6 gb FBtr0345216|FBtr0085132 27108465|27108465 27108996|27108996 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 27108779 27108967 3'utr gb FlyBase G41545.1 TTCAAAACGATCTAGCTATTTGGCCCTCCAAATAACTACCTATTAAATCTCTATATTGATGTGAAAGCTTGAGAACGAGAAAGCTTGGCTCGTTAAACCTGAATACCAAAAAACGAAAATACCTAAAAAAGCGGAAAACATGACCTGTACATCACAAGGACTGGAGAACGAAGTCAATACTATCATATT 104 27108864 0.943150634 26 97 403 0.933333333 2.146128036 0.193333333 0.355769231 0.553333333 104 10 0 140 3R:27108779-27108967 6 67.5 3688 FBgn0039487 624.3633333 28.60666667 43.79 0.108110128 2.359589839 1.541447819 1 1 1 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 27114831 27114836 + 3R_27114831_27114836_+ 0.690854475 0.62400761 0.657431042 0.047267896 CG5815 FBtr0339262|FBtr0085106 27114631|27114631 27115126|27115126 3R + 27114809 27114850 3'utr CG5815 FlyBase G46153.1 GTGCACAGGAAGAAGCGAATTCTGATGAAGATTGGTTTGCTG 7 27114840 0.97487744 4 7 44 1 0.954242509 0.444444444 0.285714286 0.444444444 7 0 0 9 3R:27114809-27114850 6 CG5815 FBtr0339262|FBtr0085106 27114631|27114631 27115126|27115126 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R + 27114798 27114850 3'utr CG5815 FlyBase G34811.1 AAACCAGAGAAGTGCACAGGAAGAAGCGAATTCTGATGAAGATTGGTTTGCTG 7 27114840 0.949350225 4 7 36 1 1.041392685 0.545454545 0.285714286 0.545454545 7 0 0 11 3R:27114798-27114850 6 6.5 3689 FBgn0027574 396.19 21.08 32.38333333 0.01640627 0.308349146 0.200720535 -9 -9 -9 0.1 dme-miR-965-3p 6mer2-7 ACGCTT 3R 27118486 27118491 + 3R_27118486_27118491_+ 0.994883235 0.936122229 0.965502732 0.041550302 CG5880 FBtr0085108 27118289 27118532 3R + 27118453 27118501 3'utr CG5880 FlyBase G46159.1 TTGTTTCCATGACGACTAGGACTAGGCACAATGACGCTTTTATACTACT 58 27118492 0.636881498 6 56 371 0.942857143 1.217483944 0 0.103448276 0.257142857 58 1 3 66 3R:27118453-27118501 6 CG5880 FBtr0085108 27118289 27118532 ACGCTT 6mer2-7 dme-miR-965-3p 3R + 27118453 27118509 3'utr CG5880 FlyBase G34816.1 TTGTTTCCATGACGACTAGGACTAGGCACAATGACGCTTTTATACTACTACTAGCTT 42 27118492 0.758240575 7 40 277 0.956521739 1.819543936 0 0.404761905 0.637681159 42 3 0 66 3R:27118453-27118509 6 48 3690 FBgn0039489 95.00666667 7.643333333 11.70333333 0.505227703 6.279982556 4.101395614 -6 -6 -6 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3R 27125025 27125031 - 3R_27125025_27125031_- 0.521223855 0.521223855 0.521223855 0 CG6051 FBtr0305050|FBtr0339264 27124757|27124757 27125642|27125642 3R - 27125004 27125049 3'utr CG6051 FlyBase G55035.1 TTTTTGCGAAACATTTTTTGTGATTTATCGTAATTTTATATGTATT 71 27125025 0.635087439 10 69 829 0.978723404 1.662757832 0.361702128 0.267605634 0.446808511 71 1 1 92 3R:27125004-27125049 7 CG6051 FBtr0339264|FBtr0305050 27124757|27124757 27125642|27125642 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 27124989 27125094 3'utr CG6051 FlyBase G41560.1 ATTGCGCGATCAAGCTGATTTAGTAGGCGTTAACTGTAGCAGAAATTTTTGCGAAACATTTTTTGTGATTTATCGTAATTTTATATGTATTAATTCGCTTATGTTA 47 27125025 0.992890002 11 45 519 0.970588235 1.51851394 0.308823529 0.319148936 0.529411765 47 1 1 66 3R:27124989-27125094 7 55.5 3691 FBgn0039492 806.82 24.12 36.87 0.068788577 2.300995025 1.505288853 -6 -6 -6 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 27125569 27125574 - 3R_27125569_27125574_- 0.99802255 0.999835117 0.998928833 0.001281702 CG6051 FBtr0305050|FBtr0305050|FBtr0305050|FBtr0339264|FBtr0339264|FBtr0339264|FBtr0113297|FBtr0113297|FBtr0113297 27124757|27124757|27124757|27124757|27124757|27124757|27125436|27125436|27125436 27125642|27125642|27125642|27125642|27125642|27125642|27125642|27125642|27125642 3R - 27125529 27125599 3'utr CG6051 FlyBase G55037.1 GTGGCCGCGATGGAGGAAAAGCAAACTGTGAATCGCAATTGTTCCGCAAACATTGTTTTCTTTATTTTATA 45 27125567 0.845257333 10 44 198 0.98 1.69019608 0.4 0.111111111 0.2 45 1 0 49 3R:27125529-27125599 6 CG6051 FBtr0339264|FBtr0339264|FBtr0339264|FBtr0113297|FBtr0113297|FBtr0113297|FBtr0305050|FBtr0305050|FBtr0305050 27124757|27124757|27124757|27125436|27125436|27125436|27124757|27124757|27124757 27125642|27125642|27125642|27125642|27125642|27125642|27125642|27125642|27125642 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 27125530 27125619 3'utr CG6051 FlyBase G41561.1 CGCAGCTGACGACCAAAAATGTGGCCGCGATGGAGGAAAAGCAAACTGTGAATCGCAATTGTTCCGCAAACATTGTTTTCTTTATTTTAT 33 27125567 0.932687329 9 31 118 0.893617021 1.62324929 0.446808511 0.303030303 0.510638298 33 5 0 42 3R:27125530-27125619 6 34 3692 FBgn0039492 806.82 24.12 36.87 0.04214075 1.409618574 0.922158937 -7 -7 -7 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 27156744 27156750 + 3R_27156744_27156750_+ 0.801970398 0.801970434 0.801970416 0 Men-b FBtr0085110|FBtr0085110|FBtr0085110 27156373|27156373|27156373 27157603|27157603|27157603 3R + 27156721 27156769 3'utr Men-b FlyBase G46176.1 AAAAATTATCATGTTATTAATTTTGTGATACCGAAACGTACGATACTAA 27 27156742 0.8680529 5 24 244 0.909090909 0.875061263 0.181818182 0.148148148 0.303030303 27 0 3 30 3R:27156721-27156769 7 Men-b FBtr0085110|FBtr0085110|FBtr0085110 27156373|27156373|27156373 27157603|27157603|27157603 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 27156709 27156846 3'utr Men-b FlyBase G34826.1 TTTTATATATGTAAAAATTATCATGTTATTAATTTTGTGATACCGAAACGTACGATACTAAATGACGACATTGACATGACGACTGTGACGGTGACTACGCCTTCGAAAAAGCAATTACGCAGTATTCTATTCTATCCT 29 27156742 0.987137413 15 26 228 0.875 0.942008053 0.075 0.310344828 0.5 29 2 3 35 3R:27156709-27156846 7 20.5 3693 FBgn0029155 3172.966667 116.5433333 178.2166667 0.006460831 0.175900237 0.115028523 2 2 2 0.1 dme-miR-980-3p 6mer2-7 GCAGCT 3R 27157450 27157455 + 3R_27157450_27157455_+ 0.984454442 0.991790574 0.988122508 0.005187477 Men-b FBtr0301708|FBtr0085110 27157162|27156373 27157603|27157603 3R + 27157436 27157474 3'utr Men-b FlyBase G46179.1 ATTAACGCAATTAAGCAGCTTTGTTATAATTTATTGTTA 10 27157457 0.619581124 5 9 80 0.933333333 0.84509804 0 0.5 0.666666667 10 0 1 14 3R:27157436-27157474 6 Men-b FBtr0085110|FBtr0301708 27156373|27157162 27157603|27157603 GCAGCT 6mer2-7 dme-miR-980-3p 3R + 27157434 27157478 3'utr Men-b FlyBase G34827.1 TTATTAACGCAATTAAGCAGCTTTGTTATAATTTATTGTTAAAAG 6 27157456 0.976406744 5 5 41 1 0.84509804 0.428571429 0.4 0.571428571 5 0 0 7 3R:27157434-27157478 6 7 3694 FBgn0029155 3172.966667 116.5433333 178.2166667 0.002206137 0.060063496 0.039278032 -7 -6 -6.5 0.1 dme-miR-12-5p 6mer3-8 AATACT 3R 27172369 27172374 - 3R_27172369_27172374_- 0.554434893 0.541904782 0.548169837 0.008860119 Ser FBtr0085128|FBtr0344121 27172088|27172088 27172990|27172990 3R - 27172372 27172427 3'utr Ser FlyBase G55056.1 TGTATATAGTTCTCATTTAGGATCGTCGCGCTCTATATTGTGTATAAGCTGTAAAT 18 27172390 0.715436033 9 17 144 0.958333333 1.361727836 0.25 0.222222222 0.416666667 18 1 0 23 3R:27172372-27172427 2 Ser FBtr0085128|FBtr0344121 27172088|27172088 27172990|27172990 AATACT 6mer3-8 dme-miR-12-5p 3R - 27172320 27172426 3'utr Ser FlyBase G41571.1 GTATATAGTTCTCATTTAGGATCGTCGCGCTCTATATTGTGTATAAGCTGTAAATACTGTAAATTAGCAGTTACCGTTATTGTATTTTGTCTATAGTTAGATTGGTA 46 27172391 0.730521557 15 45 457 0.985915493 1.84509804 0.267605634 0.413043478 0.61971831 46 1 0 70 3R:27172320-27172426 6 4 3695 FBgn0004197 511.3333333 10.63 16.37666667 0.007822686 0.376293509 0.244249949 16 17 16.5 0.1 dme-miR-283-5p 8mer-m1 TGATATTT 3R 27172513 27172520 - 3R_27172513_27172520_- 0.55291721 0.549815777 0.551366493 0.002193021 Ser FBtr0085128|FBtr0344121 27172088|27172088 27172990|27172990 3R - 27172485 27172581 3'utr Ser FlyBase G55057.1 ATTTAAGTTAGATAGTGTAATTCCGAACTCTTCTCTTCGCTAAGCAACATCCTACACAGTGTGATATTTAGTGTAACCCAGGCGCGCATTTACATTC 93 27172514 0.668737143 14 88 691 0.954954955 2.025305865 0.063063063 0.161290323 0.297297297 93 5 0 106 3R:27172485-27172581 8 Ser FBtr0085128|FBtr0344121 27172088|27172088 27172990|27172990 TGATATTT 8mer-m1 dme-miR-283-5p 3R - 27172483 27172612 3'utr Ser FlyBase G41572.1 GCAGTGCCATGTCGATGTGGAAGCCCAAAATATTTAAGTTAGATAGTGTAATTCCGAACTCTTCTCTTCGCTAAGCAACATCCTACACAGTGTGATATTTAGTGTAACCCAGGCGCGCATTTACATTCAT 84 27172514 0.985359712 16 78 630 0.95620438 1.8162413 0.072992701 0.404761905 0.635036496 84 5 1 131 3R:27172483-27172612 8 65.5 3696 FBgn0004197 511.3333333 10.63 16.37666667 0.12809648 6.161806209 3.999592917 -6 -6 -6 0.1 dme-miR-276a-3p 6mer3-8 AGTTCC 3R 27172927 27172932 - 3R_27172927_27172932_- 0.999998225 0.999999637 0.999998931 9.90E-07 Ser FBtr0085128|FBtr0344121 27172088|27172088 27172990|27172990 3R - 27172840 27172957 3'utr Ser FlyBase G55061.1 AACCAGCCGCCCACAGCCAGCTCAAAGTTCCAATTGCCACAGCACGGGCGCTATTTCCAAGTGCATTAGTAGCGTAATTAAAACTAGGATATTGTTAAGGATACCAAGGTAGGCCACA 38 27172923 0.958965659 13 37 180 0.976190476 1.311753861 0.023809524 0.105263158 0.19047619 38 0 1 41 3R:27172840-27172957 6 Ser FBtr0085128|FBtr0344121 27172088|27172088 27172990|27172990 AGTTCC 6mer3-8 dme-miR-276a-3p 3R - 27172870 27172950 3'utr Ser FlyBase G41574.1 CGCCCACAGCCAGCTCAAAGTTCCAATTGCCACAGCACGGGCGCTATTTCCAAGTGCATTAGTAGCGTAATTAAAACTAGG 20 27172924 0.951459693 6 17 83 0.888888889 1.380211242 0 0.35 0.518518519 20 3 0 24 3R:27172870-27172950 6 18.5 3697 FBgn0004197 511.3333333 10.63 16.37666667 0.036179922 1.740357479 1.129656015 -9 -8 -8.5 0.1 dme-miR-970-3p 7mer-A1 CTTATGA 3R 27227490 27227496 - 3R_27227490_27227496_- 0.822662001 0.438017672 0.630339836 0.271984593 CG42813 FBtr0303825|FBtr0347068 27227438|27227068 27227706|27227706 3R - 27227450 27227577 3'utr CG42813 FlyBase G55075.1 ATGCTTTCCAACCGAGCGCATTGTGAGTGCGCCTAGCGCACACGATATAATACTGAAATTCCCGTGCCTGTCGAGGCTTACCTTATGATATGTATACCGTGTAATATGTAATAAACCCTGGCCAGCTG 18 27227499 0.977203213 9 18 120 1 1.301029996 0.05 0.111111111 0.2 18 0 0 20 3R:27227450-27227577 7 CG42813 FBtr0347068|FBtr0303825 27227068|27227438 27227706|27227706 CTTATGA 7mer-A1 dme-miR-970-3p 3R - 27227489 27227516 3'utr CG42813 FlyBase G41582.1 CCGTGCCTGTCGAGGCTTACCTTATGAT 6 27227499 0.656531759 3 5 41 0.888888889 0.903089987 0.111111111 0.5 0.666666667 6 1 0 8 3R:27227489-27227516 7 7 3698 FBgn0261995 209.3266667 26.48666667 40.32666667 0.033440555 0.264283916 0.17358241 3 3 3 0.1 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 27242373 27242378 - 3R_27242373_27242378_- 0.999999855 0.999999995 0.999999925 7.07E-08 CG18766 FBtr0333327|FBtr0085122|FBtr0085123 27242333|27242333|27242333 27242709|27242709|27242709 3R - 27242365 27242489 3'utr CG18766 FlyBase G55085.1 CGATCGCGCCCTCGATACAGAGTTGACTTCCGTAAAGAGGGGGCTGGATCGATCAATCGTGCATAGAGATCCTAGGGAGTACATTACATTTAGACACCATTTCCTACTGTTAGCTGTAAACTATT 64 27242389 0.828264264 17 58 498 0.935897436 1.562292864 0.141025641 0.1875 0.333333333 64 4 1 73 3R:27242365-27242489 6 CG18766 FBtr0085123|FBtr0085122|FBtr0333327 27242333|27242333|27242333 27242709|27242709|27242709 AGCTGT 6mer3-8 dme-miR-1008-3p 3R - 27242359 27242452 3'utr CG18766 FlyBase G41586.1 AGGGGGCTGGATCGATCAATCGTGCATAGAGATCCTAGGGAGTACATTACATTTAGACACCATTTCCTACTGTTAGCTGTAAACTATTATGCAT 40 27242389 0.862003502 10 38 310 0.98 1.69019608 0.22 0.2 0.36 40 1 0 49 3R:27242359-27242452 6 36 3699 FBgn0042111 927.4033333 71.10333333 109.1233333 0.038818062 0.506305377 0.329901946 11 11 11 0.1 dme-miR-8-3p 7mer-m8 CAGTATT 3R 27242531 27242537 - 3R_27242531_27242537_- 0.661615243 0.661615239 0.661615241 0 CG18766 FBtr0333327|FBtr0085122|FBtr0085123 27242333|27242333|27242333 27242709|27242709|27242709 3R - 27242490 27242549 3'utr CG18766 FlyBase G55085.2 ACACACGGCATACAGTATTTTTTGTATAGTTAAAATATACATTGGAGTTTTAGTTCTCGA 58 27242539 0.907122899 11 53 523 0.925373134 1.315270435 0 0.155172414 0.268656716 58 3 2 62 3R:27242490-27242549 7 CG18766 FBtr0085123|FBtr0085122|FBtr0333327 27242333|27242333|27242333 27242709|27242709|27242709 CAGTATT 7mer-m8 dme-miR-8-3p 3R - 27242476 27242548 3'utr CG18766 FlyBase G41587.1 CACACGGCATACAGTATTTTTTGTATAGTTAAAATATACATTGGAGTTTTAGTTCTCGACGATCGCGCCCTCG 27 27242529 0.990119859 7 25 250 0.925 1.568201724 0.05 0.333333333 0.55 27 3 0 37 3R:27242476-27242548 7 36 3700 FBgn0042111 927.4033333 71.10333333 109.1233333 0.038818062 0.506305377 0.329901946 2 -8 -3 0.1 dme-miR-970-3p 6mer3-8 TCTTAT 3R 27256336 27256341 + 3R_27256336_27256341_+ 0.999973007 0.999977328 0.999975167 3.04E-06 TfIIA-L FBtr0085156|FBtr0085155|FBtr0085154 27256140|27256140|27256140 27256463|27256463|27256463 3R + 27256314 27256423 3'utr TfIIA-L FlyBase G46196.1 ACGTACTCGGGCCGACACTGTATCTTATTTTAGTTCCATCTGTTTTGTATTACGATAGCTTAAGGGTGTGTTGCAACCAACCATCTCGATTAAATGTATTAGAGTGCCGC 19 27256336 0.982208629 10 18 141 1 1.322219295 0.238095238 0.105263158 0.19047619 19 0 0 21 3R:27256314-27256423 6 TfIIA-L FBtr0085154|FBtr0085155|FBtr0085156 27256140|27256140|27256140 27256463|27256463|27256463 TCTTAT 6mer3-8 dme-miR-970-3p 3R + 27256310 27256346 3'utr TfIIA-L FlyBase G34842.1 AGCAACGTACTCGGGCCGACACTGTATCTTATTTTAG 9 27256333 0.783779911 6 9 56 1 1.255272505 0.166666667 0.333333333 0.666666667 9 0 0 18 3R:27256310-27256346 6 8.5 3701 FBgn0011289 653.3333333 54.7 83.7 0.013010204 0.155393053 0.101553166 0 3 1.5 0.1 dme-miR-252-5p 7mer-m1 TACTTAG 3R 27256866 27256872 - 3R_27256866_27256872_- 0.567547081 0.689682813 0.628614947 0.086362982 woc FBtr0085178|FBtr0334730|FBtr0112857|FBtr0334731 27256593|27256593|27256593|27256593 27257305|27257305|27257305|27257305 3R - 27256738 27256941 3'utr woc FlyBase G55097.1 ACGCGAGACATTTTCATTAGTTTTAGGATGGTAAGATCGTAAGCCAGACAACCAGGCATCTTTAGTCATTACTTAGATTGTTTAGGCGATAAGACATAAGCCAAGTGCGATGTGGTGCCCGACCGGATAAGCGGATGCGGATGCGGATAAGTGCATGTATGTATGTACATAGATTGACGATGGATGACCAGATTCCCGTGTACA 101 27256880 0.969997939 21 95 547 0.959016393 1.591064607 0.12295082 0.168316832 0.31147541 101 3 2 117 3R:27256738-27256941 7 woc FBtr0112857|FBtr0334731|FBtr0085178|FBtr0334730 27256593|27256593|27256593|27256593 27257305|27257305|27257305|27257305 TACTTAG 7mer-m1 dme-miR-252-5p 3R - 27256854 27256939 3'utr woc FlyBase G41594.2 GCGAGACATTTTCATTAGTTTTAGGATGGTAAGATCGTAAGCCAGACAACCAGGCATCTTTAGTCATTACTTAGATTGTTTAGGCG 69 27256880 0.961925615 11 61 381 0.898989899 1.949390007 0.111111111 0.289855072 0.505050505 69 10 0 89 3R:27256854-27256939 7 23 3702 FBgn0010328 3628.043333 70.90333333 108.5766667 0.006339505 0.324385313 0.211831885 8 8 8 0.1 dme-miR-1012-3p 8mer-A1 TTGACTAA 3R 27257031 27257038 - 3R_27257031_27257038_- 0.627007344 0.627007136 0.62700724 1.41E-07 woc FBtr0085178|FBtr0334730|FBtr0112857|FBtr0334731 27256593|27256593|27256593|27256593 27257305|27257305|27257305|27257305 3R - 27256966 27257130 5'utr-coding woc FlyBase G55098.1 ACGCATATTTCGATTGTCTCTAGTTGCGATAACGCTGATGGAGGTGACCTTGTATAAAATGTGAACGCCAACCAAGCACATCTCACTTTCGATTGACTAAACTTAATCTAGGAATCAAAAAAATCCAAGCAGCAATATACACAACTAAACTTAACACCCACTCAC 44 27257038 0.898756544 18 41 267 0.957446809 1.352182518 0.234042553 0.068181818 0.127659574 44 1 1 45 3R:27256966-27257130 8 woc FBtr0112857|FBtr0334731|FBtr0085178|FBtr0334730 27256593|27256593|27256593|27256593 27257305|27257305|27257305|27257305 TTGACTAA 8mer-A1 dme-miR-1012-3p 3R - 27256964 27257130 5'utr-coding woc FlyBase G41595.1 ACGCATATTTCGATTGTCTCTAGTTGCGATAACGCTGATGGAGGTGACCTTGTATAAAATGTGAACGCCAACCAAGCACATCTCACTTTCGATTGACTAAACTTAATCTAGGAATCAAAAAAATCCAAGCAGCAATATACACAACTAAACTTAACACCCACTCACAT 31 27257038 0.977449356 15 31 200 1 1.672097858 0.085106383 0.419354839 0.617021277 31 0 0 47 3R:27256964-27257130 8 14 3703 FBgn0010328 3628.043333 70.90333333 108.5766667 0.003858829 0.19745193 0.128941148 0 0 0 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 27257190 27257195 - 3R_27257190_27257195_- 0.725372295 0.721629564 0.723500929 0.002646489 woc FBtr0085178|FBtr0334730|FBtr0112857|FBtr0334731 27256593|27256593|27256593|27256593 27257305|27257305|27257305|27257305 3R - 27257161 27257240 5'utr woc FlyBase G55099.1 CGATTCTTCGGCTTGGTGCTTAGCACATGTTTGTTTGCGGGCAAAACCAAATTGGACTAACCAAGGAGCGAGAGTTGTGC 68 27257188 0.805394783 7 64 284 0.973684211 1.86923172 0.197368421 0.102941176 0.197368421 68 2 0 74 3R:27257161-27257240 6 woc FBtr0112857|FBtr0334731|FBtr0085178|FBtr0334730 27256593|27256593|27256593|27256593 27257305|27257305|27257305|27257305 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 27257139 27257239 5'utr woc FlyBase G41596.1 GATTCTTCGGCTTGGTGCTTAGCACATGTTTGTTTGCGGGCAAAACCAAATTGGACTAACCAAGGAGCGAGAGTTGTGCTATATTATAAATTGTTTTAAAC 42 27257188 0.96042211 8 40 169 1 1.77815125 0.4 0.390243902 0.583333333 41 0 0 60 3R:27257139-27257239 6 40.5 3704 FBgn0010328 3628.043333 70.90333333 108.5766667 0.011163042 0.571200226 0.37300832 -7 -7 -7 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3R 27277338 27277343 - 3R_27277338_27277343_- 0.997351788 0.997729588 0.997540688 0.000267145 mrt FBtr0305972|FBtr0085174|FBtr0305971|FBtr0305974|FBtr0305975|FBtr0305973 27277247|27277247|27277247|27277247|27277247|27277247 27277589|27277589|27277589|27277589|27277589|27277589 3R - 27277326 27277374 3'utr mrt FlyBase G55150.1 ATGTATTTATTGTTCATCAACCGTCTATGCCCCAAAGTGCTGTAAAGTT 155 27277347 0.909883147 6 151 983 0.978021978 1.773298748 0.17032967 0.141935484 0.269230769 155 2 2 178 3R:27277326-27277374 6 mrt FBtr0305975|FBtr0305973|FBtr0305971|FBtr0305974|FBtr0305972|FBtr0085174 27277247|27277247|27277247|27277247|27277247|27277247 27277589|27277589|27277589|27277589|27277589|27277589 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 27277325 27277377 3'utr mrt FlyBase G41634.1 AAAATGTATTTATTGTTCATCAACCGTCTATGCCCCAAAGTGCTGTAAAGTTA 121 27277347 0.911576184 5 113 790 0.938888889 1.324796718 0.211111111 0.314049587 0.538888889 121 4 7 169 3R:27277325-27277377 6 132.5 3705 FBgn0039507 449.7733333 19.81666667 30.52666667 0.294592832 6.686291001 4.340467351 4 4 4 0.1 dme-miR-14-3p 6mer3-8 AAGACT 3R 27277424 27277429 - 3R_27277424_27277429_- 1 0.999999998 0.999999999 0 mrt FBtr0305972|FBtr0085174|FBtr0305971|FBtr0305974|FBtr0305975|FBtr0305973 27277247|27277247|27277247|27277247|27277247|27277247 27277589|27277589|27277589|27277589|27277589|27277589 3R - 27277394 27277467 3'utr mrt FlyBase G55151.1 ATATATATATTCCTAGAGCCAGACCCGCGCATTGTTAAAAGACTTGATTATATTTAAGCATTAATACATAAATG 90 27277421 0.960337608 13 80 707 0.897196262 1.505149978 0.242990654 0.155555556 0.289719626 90 9 2 96 3R:27277394-27277467 6 mrt FBtr0305975|FBtr0305973|FBtr0305971|FBtr0305974|FBtr0305972|FBtr0085174 27277247|27277247|27277247|27277247|27277247|27277247 27277589|27277589|27277589|27277589|27277589|27277589 AAGACT 6mer3-8 dme-miR-14-3p 3R - 27277383 27277469 3'utr mrt FlyBase G41635.1 ATATATATATATTCCTAGAGCCAGACCCGCGCATTGTTAAAAGACTTGATTATATTTAAGCATTAATACATAAATGAAACCTAAAGT 67 27277421 0.989928223 11 58 572 0.901098901 1.311753861 0.428571429 0.208955224 0.417582418 67 6 3 82 3R:27277383-27277469 6 66 3706 FBgn0039507 449.7733333 19.81666667 30.52666667 0.14674058 3.330529857 2.162044114 -8 -8 -8 0.1 dme-miR-970-3p 6mer3-8 TCTTAT 3R 27291555 27291560 + 3R_27291555_27291560_+ 0.948312498 0.998499647 0.973406072 0.035487639 Hmu FBtr0085164 27291132 27291592 3R + 27291460 27291627 3'utr Hmu FlyBase G46239.1 CAACCGGAAGTGCATTCCATGTAGCTAAGTTAATAGTAAACAATGCCCCAAAATTGTTAAACTCGAGCAACTTTTGATTTTGTACTGATTTTTTTTCTTATTTTCATTAAAAATAAAGGTATTTTGTAAAAATAGACGTAAGCCTAATGAGGTTGGTTGTCTTAGACT 40 27291538 0.995146089 17 40 402 1 1.662757832 0.173913043 0.125 0.239130435 40 0 0 46 3R:27291460-27291627 6 Hmu FBtr0085164 27291132 27291592 TCTTAT 6mer3-8 dme-miR-970-3p 3R + 27291463 27291573 3'utr Hmu FlyBase G34884.1 CCGGAAGTGCATTCCATGTAGCTAAGTTAATAGTAAACAATGCCCCAAAATTGTTAAACTCGAGCAACTTTTGATTTTGTACTGATTTTTTTTCTTATTTTCATTAAAAAT 28 27291538 0.96009831 14 26 290 0.975609756 1.602059991 0.048780488 0.321428571 0.536585366 28 1 0 40 3R:27291463-27291573 6 7.5 3707 FBgn0015737 809.6633333 41.37666667 63.14 0.009263109 0.181261581 0.118783655 17 17 17 0.1 dme-miR-283-5p 7mer-m8 TGATATT 3R 27547944 27547950 - 3R_27547944_27547950_- 0.620203677 0.616393051 0.618298364 0.002694501 Klp98A FBtr0085211|FBtr0304671 27547773|27547773 27548733|27548733 3R - 27547909 27547970 3'utr Klp98A FlyBase G55170.1 ACTTATAGCAATATGCTAGTTGATATTGAATGGTGAAATTGATCGATCGGCGGATCGATGGC 7 27547951 0.682433053 6 7 49 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 3R:27547909-27547970 7 Klp98A FBtr0085211|FBtr0304671 27547773|27547773 27548733|27548733 TGATATT 7mer-m8 dme-miR-283-5p 3R - 27547914 27547967 3'utr Klp98A FlyBase G41646.1 TATAGCAATATGCTAGTTGATATTGAATGGTGAAATTGATCGATCGGCGGATCG 5 27547944 0.987054416 4 5 40 1 1.079181246 0 0.8 0.916666667 5 0 0 12 3R:27547914-27547967 7 4 3708 FBgn0004387 717.51 15.74333333 24.23 0.005574835 0.254075799 0.165084606 1 -6 -2.5 0.1 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 27548254 27548261 - 3R_27548254_27548261_- 0.385560641 0.385560378 0.385560509 1.41E-07 Klp98A FBtr0085211|FBtr0304671 27547773|27547773 27548733|27548733 3R - 27548235 27548309 3'utr Klp98A FlyBase G55172.1 TATACGCATAGGTGTACGACTTCCAAAAAGTTATTCCAGTTATTTAGTCTGTGATTGCCAACTGAAGTTATAGAT 51 27548254 0.852845016 12 49 468 0.967741935 1.77815125 0.064516129 0.117647059 0.274193548 51 2 0 60 3R:27548235-27548309 8 Klp98A FBtr0085211|FBtr0304671 27547773|27547773 27548733|27548733 CTGTGATT 8mer-m1 dme-miR-308-3p 3R - 27548234 27548278 3'utr Klp98A FlyBase G41649.1 TATTCCAGTTATTTAGTCTGTGATTGCCAACTGAAGTTATAGATC 32 27548254 0.81003435 5 28 296 0.894736842 1.707570176 0.01754386 0.5 0.719298246 32 6 0 51 3R:27548234-27548278 8 38 3709 FBgn0004387 717.51 15.74333333 24.23 0.052960934 2.413720093 1.568303756 -7 -7 -7 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 3R 27548669 27548674 - 3R_27548669_27548674_- 0.999997501 0.529335833 0.764666667 0.33280808 Klp98A FBtr0085211|FBtr0304671 27547773|27547773 27548733|27548733 3R - 27548548 27548730 3'utr Klp98A FlyBase G55174.1 TTAACCTACTGCTGAATTATCTCCTGCCTACAGTGTGTCTTTTTATTTACTTGTACTACCTGTTAAGCTATATGAACGACAACATGGACCTGTTTTGATTAGCTAGCCGAAGCTACTGTGTAGATTAAATTAGTTTTAAGCCCCGTAGCTATGTAAGACCACCAGTGTCCTTTCTAACACTCG 126 27548646 0.95116423 21 120 902 0.951515152 1.718778398 0.175757576 0.246031746 0.424242424 126 6 2 157 3R:27548548-27548730 6 Klp98A FBtr0085211|FBtr0304671 27547773|27547773 27548733|27548733 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 3R - 27548571 27548728 3'utr Klp98A FlyBase G41651.1 AACCTACTGCTGAATTATCTCCTGCCTACAGTGTGTCTTTTTATTTACTTGTACTACCTGTTAAGCTATATGAACGACAACATGGACCTGTTTTGATTAGCTAGCCGAAGCTACTGTGTAGATTAAATTAGTTTTAAGCCCCGTAGCTATGTAAGACC 114 27548646 0.978985086 15 114 779 1 2.227886705 0.325443787 0.333333333 0.550295858 114 0 0 169 3R:27548571-27548728 6 49 3710 FBgn0004387 717.51 15.74333333 24.23 0.068291731 3.112428541 2.022286422 -28 -28 -28 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 27559403 27559408 - 3R_27559403_27559408_- 0.945456954 0.999982014 0.972719484 0.038554997 CG5646 FBtr0085210 27559377 27559640 3R - 27559385 27559433 3'utr CG5646 FlyBase G55183.1 AATTTTGTAAGCTTTAAAATTAAAATGATGACAAATTGCGTCCATGAAC 14 27559389 0.869600482 5 13 68 1 1.301029996 0.35 0.285714286 0.5 14 0 0 20 3R:27559385-27559433 6 CG5646 FBtr0085210 27559377 27559640 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R - 27559385 27559412 3'utr CG5646 FlyBase G41657.1 AAAATGATGACAAATTGCGTCCATGAAC 17 27559389 0.847512632 4 16 72 0.956521739 1.342422681 0.304347826 0.294117647 0.47826087 17 1 0 22 3R:27559385-27559412 6 14.5 3711 FBgn0039525 64.01333333 6.243333333 9.573333333 0.226515309 2.322477309 1.514623955 -19 -19 -19 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 27562765 27562770 - 3R_27562765_27562770_- 0.999999943 0.999999831 0.999999887 7.07E-08 wdb FBtr0085205|FBtr0085205|FBtr0085205|FBtr0085204|FBtr0085204|FBtr0085204|FBtr0085208|FBtr0085208|FBtr0085208 27561673|27561673|27561673|27561673|27561673|27561673|27561673|27561673|27561673 27565568|27565568|27565568|27565568|27565568|27565568|27565568|27565568|27565568 3R - 27562728 27562780 3'utr wdb FlyBase G55187.1 TCGTTTGTTTTGTGATCAACACCTTTGTTGCACTCTGAGTTAATCTGTTTAGT 9 27562771 0.990109938 6 9 96 1 1.079181246 0.666666667 0.222222222 0.416666667 9 0 0 12 3R:27562728-27562780 6 wdb FBtr0085208|FBtr0085208|FBtr0085208|FBtr0085204|FBtr0085204|FBtr0085204|FBtr0085205|FBtr0085205|FBtr0085205 27561673|27561673|27561673|27561673|27561673|27561673|27561673|27561673|27561673 27565568|27565568|27565568|27565568|27565568|27565568|27565568|27565568|27565568 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 27562754 27562807 3'utr wdb FlyBase G41661.1 AATGATTATTGCCTCTTCATCATCATTTCGTTTGTTTTGTGATCAACACCTTTG 12 27562771 0.994136184 4 9 124 0.888888889 0.726998728 0.277777778 0.333333333 0.555555556 12 0 2 16 3R:27562754-27562807 6 8.5 3712 FBgn0027492 2914.523333 83.19 128.17 0.002916429 0.102175742 0.066318171 1 1 1 0.1 dme-miR-2535b-3p 7mer-m1 CGTGAGT 3R 27563627 27563633 - 3R_27563627_27563633_- 0.765380753 0.425325693 0.595353223 0.240455267 wdb FBtr0085205|FBtr0085204|FBtr0085208 27561673|27561673|27561673 27565568|27565568|27565568 3R - 27563618 27563653 3'utr wdb FlyBase G55189.1 TGATAATTGTGTCTGTGAATCGTGAGTTATTATACA 12 27563627 0.791279343 4 11 108 0.928571429 1.113943352 0.357142857 0.166666667 0.285714286 12 1 0 13 3R:27563618-27563653 7 wdb FBtr0085208|FBtr0085204|FBtr0085205 27561673|27561673|27561673 27565568|27565568|27565568 CGTGAGT 7mer-m1 dme-miR-2535b-3p 3R - 27563614 27563655 3'utr wdb FlyBase G41663.1 AATGATAATTGTGTCTGTGAATCGTGAGTTATTATACACATA 15 27563645 0.700494477 6 15 136 1 1.322219295 0.238095238 0.266666667 0.476190476 15 0 0 21 3R:27563614-27563655 7 13 3713 FBgn0027492 2914.523333 83.19 128.17 0.004460421 0.156268782 0.101427791 -6 12 3 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 27564381 27564386 - 3R_27564381_27564386_- 0.999999998 0.999995548 0.999997773 3.18E-06 wdb FBtr0085205|FBtr0085204|FBtr0085208 27561673|27561673|27561673 27565568|27565568|27565568 3R - 27564341 27564395 3'utr wdb FlyBase G55193.1 GATAAACGCTGATCTATATAAATGTATGTAAAGTGTAAAGCGGCGGATACACAAA 8 27564378 0.97757128 6 8 55 1 1 0.5 0.25 0.4 8 0 0 10 3R:27564341-27564395 6 wdb FBtr0085208|FBtr0085204|FBtr0085205 27561673|27561673|27561673 27565568|27565568|27565568 TGATCT 6mer3-8 dme-bantam-3p 3R - 27564373 27564405 3'utr wdb FlyBase G41664.1 TATAACGTACGATAAACGCTGATCTATATAAAT 7 27564379 0.741171191 4 7 43 1 1.041392685 0 0.285714286 0.545454545 7 0 0 11 3R:27564373-27564405 6 7 3714 FBgn0027492 2914.523333 83.19 128.17 0.002401765 0.084144729 0.054614965 -8 -7 -7.5 0.1 dme-miR-12-5p 6mer2-7 ATACTC 3R 27565372 27565377 - 3R_27565372_27565377_- 0.750076529 0.984279948 0.867178238 0.165606812 wdb FBtr0085205|FBtr0085203|FBtr0085209|FBtr0085204|FBtr0085207|FBtr0085208 27561673|27565040|27565040|27561673|27565040|27561673 27565568|27565568|27565568|27565568|27565568|27565568 3R - 27565365 27565470 3'utr wdb FlyBase G55201.1 AAGCAAGCAACCACATCTAAAGGAGAAATAAATAGTTATACTAAACCACACATATGCTAAACCTTAAAACCAGAAAACATAAAACTGAAACGTATACTCGATTGAC 35 27565391 0.926050507 9 27 97 0.7 1.447158031 0.05 0.142857143 0.25 35 12 0 28 3R:27565365-27565470 6 wdb FBtr0085207|FBtr0085208|FBtr0085209|FBtr0085204|FBtr0085205|FBtr0085203 27565040|27561673|27565040|27561673|27561673|27565040 27565568|27565568|27565568|27565568|27565568|27565568 ATACTC 6mer2-7 dme-miR-12-5p 3R - 27565264 27565403 3'utr wdb FlyBase G41669.1 AACCAGAAAACATAAAACTGAAACGTATACTCGATTGACAAGACACCAACCAAGCTGGCCAGACCCACAGCTCGCTTGGGCGGCTGTTGAAGGAGGTAGAACCGAAATCTGGATCGGGATCAGGATCGGGAGCTGGATCA 26 27565391 0.900476122 10 21 66 0.875 1.146128036 0.15625 0.230769231 0.375 26 3 1 28 3R:27565264-27565403 6 7 3715 FBgn0027492 2914.523333 83.19 128.17 0.002401765 0.084144729 0.054614965 14 14 14 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 27585541 27585546 + 3R_27585541_27585546_+ 0.999998803 1 0.999999401 8.49E-07 pins FBtr0085189 27585321 27586376 3R + 27585479 27585565 3'utr pins FlyBase G46255.1 AAGATTTATATATACACACGTACACGAAAAGCATTAATTTATGAATAGCAACTAACCACGTAACCAAATATTAGGGGTGTATAGGGC 8 27585549 0.942401673 6 8 37 1 0.903089987 0.5 0 0 8 0 0 8 3R:27585479-27585565 6 pins FBtr0085189 27585321 27586376 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 27585525 27585568 3'utr pins FlyBase G34896.1 AGCAACTAACCACGTAACCAAATATTAGGGGTGTATAGGGCCTC 5 27585549 0.971052433 3 4 24 0.857142857 0.77815125 0.142857143 0.4 0.571428571 5 1 0 6 3R:27585525-27585568 6 4 3716 FBgn0040080 1104.993333 40.80333333 62.47 0.003619931 0.098031207 0.064030735 -8 -8 -8 0.1 dme-miR-7-5p 6mer3-8 GTCTTC 3R 27585774 27585779 + 3R_27585774_27585779_+ 1 0.999966694 0.999983347 2.35E-05 pins FBtr0085189 27585321 27586376 3R + 27585701 27585786 3'utr pins FlyBase G46257.1 AATTGCATGTGCAAGTAGTTTAAGCCGGATAATACTAATGTACTAATCCAATTTGCTCAATAGACGGAACCAAGTCTTCTCTACGA 11 27585754 0.965539612 9 11 60 1 1.146128036 0.214285714 0.272727273 0.428571429 11 0 0 14 3R:27585701-27585786 6 pins FBtr0085189 27585321 27586376 GTCTTC 6mer3-8 dme-miR-7-5p 3R + 27585738 27585778 3'utr pins FlyBase G34898.1 ATGTACTAATCCAATTTGCTCAATAGACGGAACCAAGTCTT 5 27585753 0.977323709 4 4 25 0.8 0.602059991 0 0 0 5 1 0 4 3R:27585738-27585778 5 3 3717 FBgn0040080 1104.993333 40.80333333 62.47 0.002714949 0.073523405 0.048023051 20 21 20.5 0.1 dme-miR-980-3p 6mer3-8 GGCAGC 3R 27598074 27598079 - 3R_27598074_27598079_- 0.999998609 0.999998745 0.999998677 7.07E-08 dsd FBtr0335247|FBtr0301390 27597561|27597759 27599034|27599034 3R - 27598058 27598103 3'utr dsd FlyBase G55223.1 AAACTAATCGTAAGGTTTCCTCTTGGCAGCAGCAAACAAACAAAAA 40 27598080 0.966817754 2 40 216 1 1.698970004 0.06 0.2 0.36 40 0 0 50 3R:27598058-27598103 6 dsd FBtr0335247|FBtr0301390 27597561|27597759 27599034|27599034 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 27598059 27598104 3'utr dsd FlyBase G41686.1 CAAACTAATCGTAAGGTTTCCTCTTGGCAGCAGCAAACAAACAAAA 28 27598080 0.970932985 2 28 162 1 1.556302501 0.222222222 0.285714286 0.444444444 28 0 0 36 3R:27598059-27598104 6 34 3718 FBgn0039528 2636.286667 54.87666667 84.28333333 0.012896928 0.61957116 0.403401226 1 1 1 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 27598484 27598489 - 3R_27598484_27598489_- 0.999941553 0.999968405 0.999954979 1.90E-05 dsd FBtr0335247|FBtr0301390 27597561|27597759 27599034|27599034 3R - 27598439 27598507 3'utr dsd FlyBase G55225.1 AAACAAAAGACATTCAATTGATCTTAGCAAAAAAAAAAGTGATGAACCAAACCAGAGGACAGGCAGACA 20 27598489 0.970494347 4 20 110 1 1.462397998 0 0.35 0.551724138 20 0 0 29 3R:27598439-27598507 6 dsd FBtr0335247|FBtr0301390 27597561|27597759 27599034|27599034 TGATCT 6mer3-8 dme-bantam-3p 3R - 27598443 27598506 3'utr dsd FlyBase G41688.2 AACAAAAGACATTCAATTGATCTTAGCAAAAAAAAAAGTGATGAACCAAACCAGAGGACAGGCA 22 27598489 0.974488327 5 21 116 0.96969697 1.505149978 0.090909091 0.409090909 0.606060606 22 1 0 32 3R:27598443-27598506 6 18.5 3719 FBgn0039528 2636.286667 54.87666667 84.28333333 0.007017446 0.337119602 0.219497726 0 0 0 0.1 dme-miR-1003-3p 6mer2-7 TGTGAG 3R 27598556 27598561 - 3R_27598556_27598561_- 0.914301567 0.772023217 0.843162392 0.100606021 dsd FBtr0335247|FBtr0301390 27597561|27597759 27599034|27599034 3R - 27598509 27598575 3'utr dsd FlyBase G55226.1 ATTTATGCAAATTTTGTGAGCTGCCCCGGCAGCAGTTGCACCATATGCCGCGACAGAAACAGAGTTA 35 27598562 0.976797909 6 33 211 0.928571429 1.290034611 0.238095238 0.2 0.333333333 35 2 1 39 3R:27598509-27598575 6 dsd FBtr0335247|FBtr0301390 27597561|27597759 27599034|27599034 TGTGAG 6mer2-7 dme-miR-1003-3p 3R - 27598538 27598572 3'utr dsd FlyBase G41689.1 TATGCAAATTTTGTGAGCTGCCCCGGCAGCAGTTG 15 27598562 0.580762985 4 12 94 0.826086957 0.801632346 0.086956522 0.533333333 0.695652174 15 2 2 19 3R:27598538-27598572 6 24 3720 FBgn0039528 2636.286667 54.87666667 84.28333333 0.009103714 0.437344348 0.284753807 1 1 1 0.1 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 27639105 27639112 + 3R_27639105_27639112_+ 0.631130249 0.631135771 0.63113301 3.96E-06 Mtl FBtr0085192|FBtr0085193 27638699|27638699 27639871|27639871 3R + 27639078 27639156 3'utr Mtl FlyBase G46263.1 AAATCTAATGCACTACATATGTAGAAATCTAGTCAATTGAATCGAATGTATTGTACGAATAGTATCTGGCAGAAAGAGA 45 27639105 0.984277687 10 42 334 0.928571429 1.113943352 0.517857143 0.155555556 0.321428571 45 1 3 52 3R:27639078-27639156 8 Mtl FBtr0085193|FBtr0085192 27638699|27638699 27639871|27639871 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 27639078 27639153 3'utr Mtl FlyBase G34904.1 AAATCTAATGCACTACATATGTAGAAATCTAGTCAATTGAATCGAATGTATTGTACGAATAGTATCTGGCAGAAAG 48 27639114 0.985072996 10 42 334 0.902777778 1.511883361 0.430555556 0.416666667 0.611111111 48 6 1 65 3R:27639078-27639153 8 44 3721 FBgn0039532 1160.21 67.97 104.5233333 0.037924169 0.647344417 0.420958638 0 -9 -4.5 0.1 dme-miR-283-5p 7mer-m8 TGATATT 3R 27639341 27639347 + 3R_27639341_27639347_+ 0.620203257 0.620201147 0.620202202 1.56E-06 Mtl FBtr0085192|FBtr0085193 27638699|27638699 27639871|27639871 3R + 27639306 27639361 3'utr Mtl FlyBase G46265.1 ACTTGACGACGAGCTCTTAGAGAAGCCACTTTTTATGATATTCAAGCATGCGCATT 7 27639341 0.986785929 3 7 56 1 0.84509804 0 0 0 7 0 0 7 3R:27639306-27639361 7 Mtl FBtr0085193|FBtr0085192 27638699|27638699 27639871|27639871 TGATATT 7mer-m8 dme-miR-283-5p 3R + 27639287 27639352 3'utr Mtl FlyBase G34906.1 TCTGAAACCAGGCCAATTCACTTGACGACGAGCTCTTAGAGAAGCCACTTTTTATGATATTCAAGC 7 27639322 0.977519334 3 6 40 0.928571429 1.113943352 0.357142857 0.714285714 0.857142857 7 1 0 13 3R:27639287-27639352 7 4 3722 FBgn0039532 1160.21 67.97 104.5233333 0.003447652 0.058849492 0.038268967 0 19 9.5 0.1 dme-miR-2535b-3p 6mer3-8 CCGTGA 3R 27639809 27639814 + 3R_27639809_27639814_+ 0.999999774 0.999997318 0.999998546 1.77E-06 Mtl FBtr0085192|FBtr0085193 27638699|27638699 27639871|27639871 3R + 27639753 27639831 3'utr Mtl FlyBase G46267.1 AAGTCTTATGTAAATGAAATGTAAACGAAGGCCGTTTGGCTCCAGCGATGTAGTAGCCGTGAAACAGATTTAATACTTA 11 27639806 0.957128157 6 11 56 1 1.113943352 0.153846154 0.181818182 0.307692308 11 0 0 13 3R:27639753-27639831 6 Mtl FBtr0085193|FBtr0085192 27638699|27638699 27639871|27639871 CCGTGA 6mer3-8 dme-miR-2535b-3p 3R + 27639789 27639816 3'utr Mtl FlyBase G34908.1 TGGCTCCAGCGATGTAGTAGCCGTGAAA 5 27639806 0.770466242 2 5 19 1 0.903089987 0.375 0.6 0.75 5 0 0 8 3R:27639789-27639816 6 6 3723 FBgn0039532 1160.21 67.97 104.5233333 0.005171478 0.088274239 0.057403451 3 3 3 0.1 dme-miR-184-3p 6mer2-7 CCGTCC 3R 27680148 27680153 + 3R_27680148_27680153_+ 0.999999291 0.999996214 0.999997752 2.19E-06 CG12883 FBtr0085216 27679952 27680336 3R + 27680133 27680200 3'utr CG12883 FlyBase G46280.1 ACGAAGAAACGGAAACCGTCCTCCTATCTCATTGTGGCTTCCGAGTCGTGCTAGAGCCTAAGCTCACC 19 27680154 0.983849375 7 13 102 0.7 1.146128036 0.05 0.052631579 0.1 19 6 0 14 3R:27680133-27680200 6 CG12883 FBtr0085216 27679952 27680336 CCGTCC 6mer2-7 dme-miR-184-3p 3R + 27680135 27680190 3'utr CG12883 FlyBase G34920.2 GAAGAAACGGAAACCGTCCTCCTATCTCATTGTGGCTTCCGAGTCGTGCTAGAGCC 9 27680164 0.885198103 6 6 53 0.857142857 1.079181246 0 0.444444444 0.642857143 9 2 0 12 3R:27680135-27680190 6 7 3724 FBgn0039538 103.9833333 13.51666667 20.85666667 0.067318481 0.517879162 0.335624101 -6 -16 -11 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 27696484 27696491 + 3R_27696484_27696491_+ 0.650171176 0.650171026 0.650171101 1.41E-07 CG43320 FBtr0306924|FBtr0306924|FBtr0306924 27696450|27696450|27696450 27696531|27696531|27696531 3R + 27696460 27696503 3'utr CG43320 FlyBase G46282.1 ACGTGTCTAGGGTAAGAACGTTTACTGTGATACGTGATAATAAT 61 27696481 0.756387817 6 60 503 0.985294118 1.826074803 0.455882353 0.114754098 0.205882353 61 1 0 67 3R:27696460-27696503 8 CG43320 FBtr0306924|FBtr0306924|FBtr0306924 27696450|27696450|27696450 27696531|27696531|27696531 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 27696459 27696500 3'utr CG43320 FlyBase G34922.1 CACGTGTCTAGGGTAAGAACGTTTACTGTGATACGTGATAAT 39 27696481 0.761456478 4 38 315 0.98245614 1.748188027 0.596491228 0.333333333 0.543859649 39 1 0 56 3R:27696459-27696500 8 50 3725 FBgn0263025 42.64 4.076666667 6.266666667 1.17260788 12.26492232 7.978723404 3 3 3 0.1 dme-miR-307a-3p 7mer-A1 GTTGTGA 3R 27933007 27933013 - 3R_27933007_27933013_- 0.822433583 0.823349562 0.822891573 0.00064771 Mes-4 FBtr0085267|FBtr0335014 27932980|27932980 27933182|27933182 3R - 27933001 27933038 3'utr Mes-4 FlyBase G55292.1 TGGAGATTGTGCTGAACAGATGGATGTTGTGAAAATAA 6 27933014 0.71400301 4 5 33 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3R:27933001-27933038 7 Mes-4 FBtr0335014|FBtr0085267 27932980|27932980 27933182|27933182 GTTGTGA 7mer-A1 dme-miR-307a-3p 3R - 27932989 27933035 3'utr Mes-4 FlyBase G41727.1 AGATTGTGCTGAACAGATGGATGTTGTGAAAATAAAGTGAGACGATT 12 27933017 0.861487842 7 10 64 0.875 0.84509804 0.375 0.25 0.4375 12 1 1 14 3R:27932989-27933035 7 6.5 3726 FBgn0039559 1839.39 48.38 74.15333333 0.00353378 0.134353038 0.087656208 1 4 2.5 0.1 dme-bantam-3p 7mer-m8 TGATCTC 3R 27942649 27942655 + 3R_27942649_27942655_+ 0.661615175 0.661615211 0.661615193 0 CG5514 FBtr0301143 27942441 27942778 3R + 27942554 27942675 intron-3'utr CG5514 FlyBase G46349.1 TGCGTGTGACTAAAGTGCTTGTTTTTATCAGCAGACGCCCTGTCCGCCAGGCGACTCAGCAAGAAGCTCTGCCAGCAGCAGCGGTACACCAACGATGATCTCTACAAGCCCCGTCCAATCCT 155 27942649 0.945020675 10 151 617 0.97740113 1.937016107 0.192090395 0.103225806 0.214689266 155 3 1 173 3R:27942554-27942675 7 CG5514 FBtr0085252|FBtr0301143 27942441|27942441 27942778|27942778 TGATCTC 7mer-m8 dme-bantam-3p 3R + 27942622 27942724 stop_codon CG5514 FlyBase G34979.1 CTGCCAGCAGCAGCGGTACACCAACGATGATCTCTACAAGCCCCGTCCAATCCTGTCGCAGCGCTCTCGTCGCCGGGGCCTGGACTCCATTCTCTAGCCAACG 80 27942649 0.939774268 11 78 318 0.9609375 2.089905111 0.25 0.425 0.640625 80 5 0 123 3R:27942622-27942724 7 109 3727 FBgn0039560 308.5966667 10.24 15.73 0.353211851 10.64453125 6.929434202 0 0 0 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 28319903 28319908 - 3R_28319903_28319908_- 0.994975661 0.995262706 0.995119183 0.00020294 larp FBtr0306389|FBtr0306390|FBtr0306388|FBtr0301181|FBtr0301180|FBtr0089682|FBtr0089680 28318160|28318160|28318160|28318160|28318160|28318160|28318160 28320581|28320581|28320581|28320581|28320581|28320581|28320581 3R - 28319879 28319992 3'utr larp FlyBase G55332.1 CGATATAACCTATGCAAATATTACCTAACGAAAACTGAAAACCAATCAATCGAAATTGATACGCAAGCAACAACAAAAACCAAATGATCTTAATGCAAATAAATTTTGTAAATT 1150 28319908 0.979048701 16 1138 4999 0.9886121 2.239612259 0.019217082 0.175652174 0.325266904 1150 9 7 1389 3R:28319879-28319992 6 larp FBtr0301181|FBtr0301180|FBtr0089682|FBtr0089680|FBtr0306389|FBtr0306390|FBtr0306388 28318160|28318160|28318160|28318160|28318160|28318160|28318160 28320581|28320581|28320581|28320581|28320581|28320581|28320581 TGATCT 6mer3-8 dme-bantam-3p 3R - 28319880 28319953 3'utr larp FlyBase G41762.1 AACCAATCAATCGAAATTGATACGCAAGCAACAACAAAAACCAAATGATCTTAATGCAAATAAATTTTGTAAAT 815 28319908 0.977454823 10 801 3509 0.984100418 2.769377326 0.011715481 0.319018405 0.535564854 815 18 1 1176 3R:28319880-28319953 6 967 3728 FBgn0261618 9245.076667 138.0666667 210.28 0.104596212 7.003862868 4.598630398 0 0 0 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 28320184 28320189 - 3R_28320184_28320189_- 0.999271775 0.99959281 0.999432293 0.000226981 larp FBtr0306389|FBtr0306390|FBtr0306388|FBtr0301181|FBtr0301180|FBtr0089682|FBtr0089680 28318160|28318160|28318160|28318160|28318160|28318160|28318160 28320581|28320581|28320581|28320581|28320581|28320581|28320581 3R - 28320147 28320256 3'utr larp FlyBase G55333.2 CACACACACACACATACCAATTACACACAGCGGGGTCTGTCTGCTTTGTACCAGTGCCAACCAGCCATGATCTTGGAAAATAACGAAACGATTGCCCTTATTTTTTTTTT 299 28320189 0.95636886 18 293 1595 0.980662983 2.073107098 0.154696133 0.16722408 0.312154696 299 5 2 355 3R:28320147-28320256 6 larp FBtr0301181|FBtr0301180|FBtr0089682|FBtr0089680|FBtr0306389|FBtr0306390|FBtr0306388 28318160|28318160|28318160|28318160|28318160|28318160|28318160 28320581|28320581|28320581|28320581|28320581|28320581|28320581 TGATCT 6mer3-8 dme-bantam-3p 3R - 28320018 28320354 3'utr larp FlyBase G41763.1 GGTTTAGTAGTTACGATTCCAAATGTTTGTTTCTCGCATACCCTCGACAAAAAACTAAAACAATGGTTGCTTACAAAATGCTCAATGCTCACACAAAACACACACACACACATACCAATTACACACAGCGGGGTCTGTCTGCTTTGTACCAGTGCCAACCAGCCATGATCTTGGAAAATAACGAAACGATTGCCCTTATTTTTTTTTTTTGTTCTGTTAATTATTCTCCTTATTTTTTATGCGATGCAAAAATCAAGGCAAAGATTTTCCTACTTAGAGCAGCGTTAATAGTTGACGTAATGCCATGAACTGTTGTACTATACGATTAAAGTTAAAG 303 28320189 0.972030035 39 300 1773 0.991208791 2.353146546 0.178021978 0.382838284 0.589010989 303 3 1 451 3R:28320018-28320354 6 159.5 3729 FBgn0261618 9245.076667 138.0666667 210.28 0.017252426 1.155239015 0.75851246 0 0 0 0.1 dme-miR-986-5p 7mer-m8 ATTCGAG 3R 28320445 28320451 - 3R_28320445_28320451_- 0.654837569 0.652967099 0.653902334 0.001322643 larp FBtr0306389|FBtr0306390|FBtr0306388|FBtr0301181|FBtr0301180|FBtr0089682|FBtr0089680 28318160|28318160|28318160|28318160|28318160|28318160|28318160 28320581|28320581|28320581|28320581|28320581|28320581|28320581 3R - 28320405 28320648 stop_codon larp FlyBase G55334.2 AGCAACATCAACAGCAGCGACGCCAGCGGTAACGGTATCTTCGGGGTCATCGTCGTCGAAGAAGTAGTTACACGATAATGCAGAGACACTTTTTGGATTAGGCTTAAGTTAATATCTACCGCTTAGTTTTCAGGGGGCACTCGCATTTGATGGCTCCACACTCTTTTGTTTATTCATTCTTATTATTCTTTTGTAGTATTCGAGTCAAACGTAAAGTGGGAAGAGTTGTTAGCGTTTAGCATAA 283 28320450 0.935001739 39 273 1947 0.974504249 1.837588438 0.141643059 0.183745583 0.345609065 283 5 4 344 3R:28320405-28320648 7 larp FBtr0301181|FBtr0301180|FBtr0089682|FBtr0089680|FBtr0306389|FBtr0306390|FBtr0306388 28318160|28318160|28318160|28318160|28318160|28318160|28318160 28320581|28320581|28320581|28320581|28320581|28320581|28320581 ATTCGAG 7mer-m8 dme-miR-986-5p 3R - 28320390 28320481 3'utr larp FlyBase G41764.1 GTTTATTCATTCTTATTATTCTTTTGTAGTATTCGAGTCAAACGTAAAGTGGGAAGAGTTGTTAGCGTTTAGCATAATTAAGTGAAATTTTT 152 28320450 0.933300818 12 148 1019 0.960869565 2.344392274 0.07826087 0.361842105 0.57826087 152 9 0 221 3R:28320390-28320481 7 160.5 3730 FBgn0261618 9245.076667 138.0666667 210.28 0.017360592 1.162481893 0.763268024 -1 -1 -1 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 28520748 28520753 - 3R_28520748_28520753_- 0.999789661 0.998202407 0.998996034 0.001122391 Ppn FBtr0301837|FBtr0300337|FBtr0301839|FBtr0301838 28520663|28520663|28520663|28520663 28521128|28521128|28521128|28521128 3R - 28520719 28520792 3'utr Ppn FlyBase G55382.1 CGAATTTGCCTTCTACTTTTTAGTTTCTACGACATTTCTGTGCAACGAGTAAAGCATTTAAGCCTAAAAACCAA 12 28520756 0.987747557 7 11 94 0.928571429 1.113943352 0.142857143 0.083333333 0.214285714 12 1 0 13 3R:28520719-28520792 6 Ppn FBtr0301839|FBtr0301838|FBtr0301837|FBtr0300337 28520663|28520663|28520663|28520663 28521128|28521128|28521128|28521128 GTGCAA 6mer3-8 dme-miR-92b-3p 3R - 28520703 28520766 3'utr Ppn FlyBase G41807.1 CTACGACATTTCTGTGCAACGAGTAAAGCATTTAAGCCTAAAAACCAATAATTGTAAATAAATT 6 28520757 0.955176864 5 6 31 1 1 0.4 0.5 0.7 6 0 0 10 3R:28520703-28520766 6 5.5 3731 FBgn0003137 888.9833333 12.49 19.08666667 0.006186843 0.440352282 0.288159273 3 4 3.5 0.1 dme-miR-276a-3p 7mer-A1 GTTCCTA 3R 28520850 28520856 - 3R_28520850_28520856_- 0.559240692 0.629204374 0.594222533 0.049471807 Ppn FBtr0301837|FBtr0300337|FBtr0301839|FBtr0301838 28520663|28520663|28520663|28520663 28521128|28521128|28521128|28521128 3R - 28520835 28520912 3'utr Ppn FlyBase G55383.1 AGTATTTTACTCTCTTCCAGGACAAAAGCAAATAGTATTAGTGATTTTATGTTTGTGTTCCTATTTATTCTTGATAAC 13 28520859 0.91937244 10 12 151 0.9375 1.176091259 0.3125 0.230769231 0.375 13 1 0 15 3R:28520835-28520912 7 Ppn FBtr0301839|FBtr0301838|FBtr0301837|FBtr0300337 28520663|28520663|28520663|28520663 28521128|28521128|28521128|28521128 GTTCCTA 7mer-A1 dme-miR-276a-3p 3R - 28520823 28520889 3'utr Ppn FlyBase G41808.1 AAAAGCAAATAGTATTAGTGATTTTATGTTTGTGTTCCTATTTATTCTTGATAACGAGTAACCTTAA 9 28520859 0.990984146 7 8 83 0.909090909 1 0.090909091 0.111111111 0.272727273 9 1 0 10 3R:28520823-28520889 7 6 3732 FBgn0003137 888.9833333 12.49 19.08666667 0.006749283 0.480384307 0.314355571 3 3 3 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3R 28609026 28609032 - 3R_28609026_28609032_- 0.808818836 0.807236201 0.808027518 0.001119067 CG10011 FBtr0085319|FBtr0085319 28607937|28607937 28609394|28609394 3R - 28608991 28609046 3'utr CG10011 FlyBase G55401.1 ACGACACGAATGTATACTTAAGAGAGCTCAGACTCAGCACTGTTCTCAGAATTAAT 12 28609035 0.901715016 6 10 66 0.833333333 0.698970004 0.083333333 0 0 12 1 1 10 3R:28608991-28609046 7 CG10011 FBtr0085319|FBtr0085319 28607937|28607937 28609394|28609394 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3R - 28608994 28609046 3'utr CG10011 FlyBase G41817.1 ACGACACGAATGTATACTTAAGAGAGCTCAGACTCAGCACTGTTCTCAGAATT 5 28609028 0.978696285 4 5 24 1 0.954242509 0.222222222 0.8 0.888888889 5 0 0 9 3R:28608994-28609046 7 6.5 3733 FBgn0039590 962.0733333 13.5 20.90333333 0.006756242 0.481481481 0.310955191 3 -4 -0.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 28609248 28609254 - 3R_28609248_28609254_- 0.8019704 0.801970434 0.801970417 0 CG10011 FBtr0085319|FBtr0085319|FBtr0085319 28607937|28607937|28607937 28609394|28609394|28609394 3R - 28609241 28609283 3'utr CG10011 FlyBase G55402.1 TTAGTACTTTTCAGAAAGTATTTGTTTTTTGTGATAGTTTCAA 13 28609255 0.707454133 3 11 173 0.947368421 1.255272505 0.210526316 0.307692308 0.526315789 13 1 0 18 3R:28609241-28609283 7 CG10011 FBtr0085319|FBtr0085319|FBtr0085319 28607937|28607937|28607937 28609394|28609394|28609394 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 28609241 28609270 3'utr CG10011 FlyBase G41818.1 GAAAGTATTTGTTTTTTGTGATAGTTTCAA 5 28609255 0.666793151 3 5 64 1 0.84509804 0.571428571 0.4 0.571428571 5 0 0 7 3R:28609241-28609270 7 8.5 3734 FBgn0039590 962.0733333 13.5 20.90333333 0.008835085 0.62962963 0.406633711 1 1 1 0.1 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 28695565 28695572 + 3R_28695565_28695572_+ 0.385560641 0.385560641 0.385560641 0 CG9990 FBtr0085309|FBtr0305087|FBtr0336787|FBtr0303343|FBtr0305088|FBtr0085308 28695157|28695157|28695157|28695157|28695157|28695157 28695939|28695939|28695939|28695939|28695939|28695939 3R + 28695543 28695578 3'utr CG9990 FlyBase G46413.1 AATTTTATATATTTTCAATGGACTGTGATTGTTTTT 15 28695561 0.736746895 5 14 159 0.95 1.278753601 0.05 0.266666667 0.45 15 1 0 19 3R:28695543-28695578 8 CG9990 FBtr0305088|FBtr0085308|FBtr0336787|FBtr0303343|FBtr0085309|FBtr0305087 28695157|28695157|28695157|28695157|28695157|28695157 28695939|28695939|28695939|28695939|28695939|28695939 CTGTGATT 8mer-m1 dme-miR-308-3p 3R + 28695548 28695583 3'utr CG9990 FlyBase G35026.1 TATATATTTTCAATGGACTGTGATTGTTTTTTCTAC 13 28695560 0.745503027 6 13 126 1 1.230448921 0.352941176 0.230769231 0.411764706 13 0 0 17 3R:28695548-28695583 8 14 3735 FBgn0039594 1 0.036666667 0.056666667 14 381.8181818 247.0588235 4 5 4.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 28815848 28815853 + 3R_28815848_28815853_+ 0.999979714 0.999696653 0.999838184 0.000200111 CG1646 FBtr0113301 28814209 28817354 3R + 28815823 28815896 3'utr CG1646 FlyBase G46435.1 AGCCGGCAATGCAGATCGATTTCAGTGATCTTAGCACTCTGAATGACGAAGAGGTGGTCAGCATTAGGGACAGG 21 28815848 0.980065139 5 21 145 1 1.477121255 0.2 0.333333333 0.533333333 21 0 0 30 3R:28815823-28815896 6 CG1646 FBtr0113301 28814209 28817354 TGATCT 6mer3-8 dme-bantam-3p 3R + 28815832 28815874 3'utr CG1646 FlyBase G35040.1 TGCAGATCGATTTCAGTGATCTTAGCACTCTGAATGACGAAGA 16 28815848 0.807008032 2 15 123 1 1.447158031 0.214285714 0.4375 0.678571429 16 0 0 28 3R:28815832-28815874 6 15 3736 FBgn0039600 1138.88 36.74333333 56.61666667 0.013170835 0.408237322 0.264939653 0 0 0 0.1 dme-bantam-3p 7mer-m8 TGATCTC 3R 28816496 28816502 + 3R_28816496_28816502_+ 0.661614596 0.661614299 0.661614447 2.12E-07 CG1646 FBtr0113301 28814209 28817354 3R + 28816478 28816524 3'utr CG1646 FlyBase G46438.1 CCTCAATAAAATCTGTCATGATCTCGACGCCGGCTTGGCCGCCCTGC 71 28816496 0.711954305 7 63 410 0.880952381 1.86923172 0.392857143 0.169014085 0.297619048 71 10 0 74 3R:28816478-28816524 7 CG1646 FBtr0113301 28814209 28817354 TGATCTC 7mer-m8 dme-bantam-3p 3R + 28816472 28816551 3'utr CG1646 FlyBase G35043.1 CCGTTTCCTCAATAAAATCTGTCATGATCTCGACGCCGGCTTGGCCGCCCTGCAGCAGGCGCTGGAACGTGATCCAGCCA 46 28816496 0.987401779 9 45 254 0.985294118 1.826074803 0.323529412 0.282608696 0.514705882 46 1 0 67 3R:28816472-28816551 7 55 3737 FBgn0039600 1138.88 36.74333333 56.61666667 0.04829306 1.496870181 0.971445393 0 0 0 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3R 28816868 28816873 + 3R_28816868_28816873_+ 0.999999225 0.999991741 0.999995483 5.30E-06 CG1646 FBtr0113301 28814209 28817354 3R + 28816855 28816892 3'utr CG1646 FlyBase G46439.1 AGTGATGGCAGTCCTAGTCGCAAAAACTCATCAAGCAG 6 28816865 0.923141336 4 6 18 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3R:28816855-28816892 6 CG1646 FBtr0113301 28814209 28817354 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3R + 28816855 28816884 3'utr CG1646 FlyBase G35044.1 AGTGATGGCAGTCCTAGTCGCAAAAACTCA 6 28816867 0.912319201 3 6 23 1 0.903089987 0 0.333333333 0.5 6 0 0 8 3R:28816855-28816884 6 5.5 3738 FBgn0039600 1138.88 36.74333333 56.61666667 0.004829306 0.149687018 0.097144539 3 1 2 0.1 dme-miR-33-5p 7mer-A1 AATGCAA 3R 28824625 28824631 - 3R_28824625_28824631_- 0.782875325 0.782642071 0.782758698 0.000164897 WASp FBtr0085354|FBtr0085352|FBtr0085353|FBtr0336768 28824504|28824504|28824504|28824504 28825449|28825449|28825449|28825449 3R - 28824606 28824665 3'utr WASp FlyBase G55426.1 CGCATAAGTATTTTCTTTTAGTTCGAGCGCATTTAATGCAAACTTGTAGTCATTTTTCTT 17 28824633 0.819089351 5 15 150 0.944444444 1.230448921 0.166666667 0.058823529 0.111111111 17 1 0 17 3R:28824606-28824665 7 WASp FBtr0085354|FBtr0085352|FBtr0085353|FBtr0336768 28824504|28824504|28824504|28824504 28825449|28825449|28825449|28825449 AATGCAA 7mer-A1 dme-miR-33-5p 3R - 28824593 28824650 3'utr WASp FlyBase G41841.1 TTTTAGTTCGAGCGCATTTAATGCAAACTTGTAGTCATTTTTCTTCTGTGTGTTTGTA 14 28824633 0.982650081 4 13 104 0.952380952 1.301029996 0.285714286 0.285714286 0.523809524 14 1 0 20 3R:28824593-28824650 7 13.5 3739 FBgn0024273 698.2566667 30.35666667 46.61666667 0.019333865 0.444712858 0.289595996 2 2 2 0.1 dme-miR-980-5p 8mer-m1 GAAAAACT 3R 28825026 28825033 - 3R_28825026_28825033_- 0.394009221 0.607906052 0.500957637 0.151247948 WASp FBtr0085354|FBtr0085352|FBtr0085353|FBtr0336768 28824504|28824504|28824504|28824504 28825449|28825449|28825449|28825449 3R - 28825012 28825056 3'utr WASp FlyBase G55428.1 AGAGATTCACCTTTAAGCGAACTGAAAAACTGTAAACTGAGCGAT 10 28825044 0.662980423 2 9 39 0.909090909 1 0 0.1 0.181818182 10 1 0 10 3R:28825012-28825056 8 WASp FBtr0085354|FBtr0085352|FBtr0085353|FBtr0336768 28824504|28824504|28824504|28824504 28825449|28825449|28825449|28825449 GAAAAACT 8mer-m1 dme-miR-980-5p 3R - 28825004 28825058 3'utr WASp FlyBase G41842.1 TTAGAGATTCACCTTTAAGCGAACTGAAAAACTGTAAACTGAGCGATAGAAATTT 6 28825044 0.925443937 5 6 27 1 1.204119983 0.125 0.833333333 0.9375 6 0 0 16 3R:28825004-28825058 8 8 3740 FBgn0024273 698.2566667 30.35666667 46.61666667 0.011457105 0.263533546 0.171612442 11 11 11 0.1 dme-miR-932-5p 7mer-m8 GGAATTG 3R 28869896 28869902 + 3R_28869896_28869902_+ 0.702625104 0.702950258 0.702787681 0.000229951 spg FBtr0330304|FBtr0336766 28869617|28869062 28870439|28870439 3R + 28869873 28869981 3'utr spg FlyBase G46480.1 ATTTTATATATAATTTTTCACGGGGAATTGTCGCTAAAGTTACTAAGAAGAATGTTTAGATAAGAAAATAAAGATGAAATGATTTTTATATTGAAAGAGGATATCAAAT 31 28869901 0.918329685 11 27 239 0.882352941 1.477121255 0.058823529 0.096774194 0.176470588 31 4 0 30 3R:28869873-28869981 7 spg FBtr0336766|FBtr0330304 28869062|28869617 28870439|28870439 GGAATTG 7mer-m8 dme-miR-932-5p 3R + 28869873 28869959 3'utr spg FlyBase G35071.1 ATTTTATATATAATTTTTCACGGGGAATTGTCGCTAAAGTTACTAAGAAGAATGTTTAGATAAGAAAATAAAGATGAAATGATTTTT 17 28869900 0.984116813 7 15 123 0.892857143 1.397940009 0.035714286 0.352941176 0.607142857 17 3 0 25 3R:28869873-28869959 7 15 3741 FBgn0264324 552.3333333 8.306666667 12.79 0.027157514 1.805778491 1.172791243 -5 -4 -4.5 0.1 dme-miR-33-5p 7mer-m8 CAATGCA 3R 28870069 28870075 + 3R_28870069_28870075_+ 0.64129374 0.511063296 0.576178518 0.092086799 spg FBtr0330304|FBtr0336766 28869617|28869062 28870439|28870439 3R + 28869996 28870099 3'utr spg FlyBase G46481.1 TCAGAACGCTAATCAAAAACGATCAACGCAAAATATATACACTGAAAACAAAGCAGGACACCGACAAAATGTGCAATGCAGTTTTTACTTTAACGAATATAGCC 22 28870067 0.950259749 7 19 90 0.875 1.021189299 0.125 0.090909091 0.166666667 22 2 1 21 3R:28869996-28870099 7 spg FBtr0336766|FBtr0330304 28869062|28869617 28870439|28870439 CAATGCA 7mer-m8 dme-miR-33-5p 3R + 28870046 28870081 3'utr spg FlyBase G35072.1 AAGCAGGACACCGACAAAATGTGCAATGCAGTTTTT 9 28870066 0.906629325 4 8 26 0.846153846 1.041392685 0.538461538 0.333333333 0.538461538 9 2 0 11 3R:28870046-28870081 7 11.5 3742 FBgn0264324 552.3333333 8.306666667 12.79 0.02082076 1.384430177 0.899139953 2 3 2.5 0.1 dme-miR-79-3p 6mer3-8 TAGCTT 3R 28870177 28870182 + 3R_28870177_28870182_+ 0.792811015 0.94686305 0.869837033 0.108931285 spg FBtr0330304|FBtr0336766 28869617|28869062 28870439|28870439 3R + 28870143 28870194 3'utr spg FlyBase G46482.1 ATGCGAACGGCAATTAGGAATTTTAAAGTGCTACTAGCTTCATAACGAATCA 16 28870164 0.975066441 9 15 111 0.952380952 1 0.095238095 0.25 0.428571429 16 0 1 20 3R:28870143-28870194 6 spg FBtr0336766|FBtr0330304 28869062|28869617 28870439|28870439 TAGCTT 6mer3-8 dme-miR-79-3p 3R + 28870156 28870190 3'utr spg FlyBase G35073.1 TTAGGAATTTTAAAGTGCTACTAGCTTCATAACGA 5 28870165 0.767774407 4 4 39 0.857142857 0.77815125 0.142857143 0.4 0.571428571 5 1 0 6 3R:28870156-28870190 6 9 3743 FBgn0264324 552.3333333 8.306666667 12.79 0.016294508 1.083467095 0.703674746 13 12 12.5 0.1 dme-miR-31a-5p 6mer3-8 TCTTGC 3R 28921833 28921838 + 3R_28921833_28921838_+ 0.999990045 0.999984878 0.999987462 3.61E-06 Doa FBtr0299742|FBtr0299749|FBtr0299748|FBtr0308600|FBtr0308599|FBtr0336461|FBtr0299747|FBtr0299744|FBtr0299753|FBtr0299743|FBtr0299752|FBtr0299751|FBtr0299745|FBtr0308598|FBtr0299750 28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741 28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28921965|28922772|28921965|28922772|28921965 3R + 28921794 28921840 3'utr Doa FlyBase G46524.1 CTCATGCAAACATACACTCAAGGCAGTCGTCCAGCAACGTCTTGCAC 8 28921834 0.935135252 3 7 29 0.888888889 0.903089987 0 0.125 0.222222222 8 1 0 8 3R:28921794-28921840 6 Doa FBtr0308598|FBtr0299751|FBtr0299750|FBtr0299752|FBtr0299745|FBtr0299749|FBtr0299747|FBtr0308599|FBtr0299753|FBtr0299744|FBtr0299742|FBtr0299748|FBtr0299743|FBtr0308600|FBtr0336461 28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741 28922772|28922772|28921965|28921965|28921965|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772 TCTTGC 6mer3-8 dme-miR-31a-5p 3R + 28921809 28921858 3'utr Doa FlyBase G35107.1 ACTCAAGGCAGTCGTCCAGCAACGTCTTGCACCCGACTCGTAGAGTAGAC 5 28921835 0.938897014 4 4 17 1 0.954242509 0 0.6 0.777777778 5 0 0 9 3R:28921809-28921858 6 4.5 3744 FBgn0265998 2384.633333 84.60666667 129.7833333 0.001887083 0.053187298 0.034673173 -1 -2 -1.5 0.1 dme-miR-1003-3p 6mer2-7 TGTGAG 3R 28922644 28922649 + 3R_28922644_28922649_+ 0.999985696 0.999496957 0.999741326 0.000345563 Doa FBtr0299742|FBtr0299749|FBtr0299748|FBtr0308600|FBtr0308599|FBtr0336461|FBtr0299747|FBtr0299744|FBtr0299753|FBtr0299743|FBtr0299751|FBtr0308598 28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741 28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772 3R + 28922610 28922673 3'utr Doa FlyBase G46530.1 TTGAATATACTTATACATACTTAATTCAAATGATTGTGAGTTAGTTTAATATTACATAAATATT 210 28922650 0.793700763 12 207 2066 0.988142292 1.920818754 0.098814229 0.185714286 0.324110672 210 1 2 250 3R:28922610-28922673 6 Doa FBtr0308598|FBtr0299751|FBtr0299749|FBtr0299747|FBtr0308599|FBtr0299753|FBtr0299744|FBtr0299742|FBtr0299748|FBtr0299743|FBtr0308600|FBtr0336461 28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741 28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772 TGTGAG 6mer2-7 dme-miR-1003-3p 3R + 28922608 28922674 3'utr Doa FlyBase G35111.1 AATTGAATATACTTATACATACTTAATTCAAATGATTGTGAGTTAGTTTAATATTACATAAATATTA 149 28922650 0.989349201 6 147 1418 0.981651376 1.728353782 0.077981651 0.342281879 0.550458716 149 1 3 214 3R:28922608-28922674 6 178 3745 FBgn0265998 2384.633333 84.60666667 129.7833333 0.074644599 2.103853124 1.37151663 -6 -6 -6 0.1 dme-miR-305-5p 8mer-m1 AGTACAAT 3R 29032740 29032747 - 3R_29032740_29032747_- 0.452743152 0.521733612 0.487238382 0.04878358 beta4GalNAcTB FBtr0085419 29032658 29032947 3R - 29032727 29032844 3'utr beta4GalNAcTB FlyBase G55485.1 GTTACCGCCTTAGACAATGCGTTCCGAATCGATCGTGATATCTCACTCACTAGGCTAAGAAGCTAGACGGGAATGGAGGAGTCAAAGCTGTAATTGAAGTACAATGCAGAAGCCTCAG 27 29032750 0.960193051 10 26 143 0.971428571 1.230448921 0.257142857 0.222222222 0.4 27 0 1 34 3R:29032727-29032844 8 beta4GalNAcTB FBtr0085419 29032658 29032947 AGTACAAT 8mer-m1 dme-miR-305-5p 3R - 29032714 29032772 3'utr beta4GalNAcTB FlyBase G41872.1 ATGGAGGAGTCAAAGCTGTAATTGAAGTACAATGCAGAAGCCTCAGATTAAGCGGATAT 13 29032750 0.96166694 4 12 63 0.913043478 1.322219295 0.130434783 0.461538462 0.695652174 13 2 0 21 3R:29032714-29032772 8 14.5 3746 FBgn0039625 119.31 10.86333333 16.56333333 0.121532143 1.334765265 0.875427651 3 3 3 0.1 dme-miR-1006-3p 6mer3-8 CGAATT 3R 29046296 29046301 + 3R_29046296_29046301_+ 0.507016397 0.500997598 0.504006997 0.004255934 Pkc98E FBtr0085359|FBtr0339149|FBtr0339150|FBtr0301516 29046223|29046223|29046223|29046223 29049148|29047034|29047034|29047034 3R + 29046274 29046317 3'utr Pkc98E FlyBase G46551.1 TGCGGTCGTCTGGAGCCCCGGTCGAATTGGGGGTGGCCCAAGTC 9 29046300 0.917638104 3 8 30 1 1.146128036 0.071428571 0.333333333 0.571428571 9 0 0 14 3R:29046274-29046317 6 Pkc98E FBtr0339150|FBtr0301516|FBtr0085359|FBtr0339149 29046223|29046223|29046223|29046223 29047034|29047034|29049148|29047034 CGAATT 6mer3-8 dme-miR-1006-3p 3R + 29046265 29046312 3'utr Pkc98E FlyBase G35120.1 GGATTGCGATGCGGTCGTCTGGAGCCCCGGTCGAATTGGGGGTGGCCC 5 29046300 0.953819387 3 4 19 0.833333333 0.698970004 0 0.2 0.333333333 5 1 0 5 3R:29046265-29046312 6 6.5 3747 FBgn0003093 985.62 22.17 34.02333333 0.006594834 0.293188994 0.191045361 -4 -4 -4 0.1 dme-miR-318-3p 7mer-m8 CCCAGTG 3R 29046697 29046703 + 3R_29046697_29046703_+ 0.4257479 0.352098039 0.38892297 0.052078344 Pkc98E FBtr0085359|FBtr0339149|FBtr0339150|FBtr0301516 29046223|29046223|29046223|29046223 29049148|29047034|29047034|29047034 3R + 29046657 29046718 3'utr Pkc98E FlyBase G46554.1 AAGAAAGAAGGAAGAGATACCCCCACCCATCTAGTCAATGCCCAGTGGCTGAGTGCATTTTG 85 29046686 0.958026863 8 78 359 0.928571429 1.959041392 0.224489796 0.141176471 0.255102041 85 7 0 91 3R:29046657-29046718 7 Pkc98E FBtr0339150|FBtr0301516|FBtr0085359|FBtr0339149 29046223|29046223|29046223|29046223 29047034|29047034|29049148|29047034 CCCAGTG 7mer-m8 dme-miR-318-3p 3R + 29046660 29046729 3'utr Pkc98E FlyBase G35122.1 AAAGAAGGAAGAGATACCCCCACCCATCTAGTCAATGCCCAGTGGCTGAGTGCATTTTGTTATTAGTTAT 61 29046686 0.929056765 9 55 287 0.925531915 1.638489257 0.329787234 0.393442623 0.606382979 61 6 1 87 3R:29046660-29046729 7 58 3748 FBgn0003093 985.62 22.17 34.02333333 0.058846208 2.616147948 1.704712452 11 11 11 0.1 dme-miR-8-3p 7mer-A1 AGTATTA 3R 29046965 29046971 + 3R_29046965_29046971_+ 0.817277761 0.823349562 0.820313662 0.004293411 Pkc98E FBtr0085359|FBtr0339149|FBtr0339150|FBtr0301516 29046223|29046223|29046223|29046223 29049148|29047034|29047034|29047034 3R + 29046945 29046992 3'utr Pkc98E FlyBase G46555.1 CTTGCACAACTTCCTTCTCAAGTATTAAAGCGATATTATTTTAAAGTT 12 29046961 0.908393151 7 8 103 0.769230769 0.698970004 0.307692308 0.083333333 0.153846154 12 2 1 10 3R:29046945-29046992 7 Pkc98E FBtr0339150|FBtr0301516|FBtr0085359|FBtr0339149 29046223|29046223|29046223|29046223 29047034|29047034|29049148|29047034 AGTATTA 7mer-A1 dme-miR-8-3p 3R + 29046894 29047002 3'utr Pkc98E FlyBase G35123.1 AATACATGCGACCACACGGATCTAGTTTCATTTGTTTTACATATTCGAAATCTTGCACAACTTCCTTCTCAAGTATTAAAGCGATATTATTTTAAAGTTACCTTATTGT 15 29046961 0.992828398 11 13 141 0.826086957 1.278753601 0.086956522 0.4 0.608695652 15 4 0 19 3R:29046894-29047002 7 8 3749 FBgn0003093 985.62 22.17 34.02333333 0.008116718 0.360847993 0.235132752 4 4 4 0.1 dme-miR-305-5p 7mer-m1 GTACAAT 3R 29050677 29050683 + 3R_29050677_29050683_+ 0.765586663 0.765586663 0.765586663 0 CG11837 FBtr0085360 29050645 29050721 3R + 29050662 29050693 3'utr CG11837 FlyBase G46562.1 AGATCGTTAAACTTTGTACAATTTACCAACAT 8 29050675 0.626237893 4 8 70 1 0.903089987 0 0 0 8 0 0 8 3R:29050662-29050693 7 CG11837 FBtr0085360 29050645 29050721 GTACAAT 7mer-m1 dme-miR-305-5p 3R + 29050657 29050694 3'utr CG11837 FlyBase G35126.1 TCTATAGATCGTTAAACTTTGTACAATTTACCAACATT 9 29050683 0.596077959 4 9 72 1 1.113943352 0 0.333333333 0.538461538 9 0 0 13 3R:29050657-29050694 7 8 3750 FBgn0039627 323 36.6 56.57333333 0.024767802 0.218579235 0.14140938 2 -6 -2 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 29058766 29058771 + 3R_29058766_29058771_+ 0.987600125 0.998990282 0.993295204 0.008054088 Sirt7 FBtr0085364 29058678 29059204 3R + 29058723 29058791 3'utr Sirt7 FlyBase G46565.1 GGTGAAATGATTACCCTTGAGTCAATGGCTTTTTGGAAACGTTTGATCTTATACTTGATATGAAGGAGC 22 29058774 0.854690217 10 22 177 1 1.431363764 0.296296296 0.181818182 0.333333333 22 0 0 27 3R:29058723-29058791 6 Sirt7 FBtr0085364 29058678 29059204 TGATCT 6mer3-8 dme-bantam-3p 3R + 29058690 29058779 3'utr Sirt7 FlyBase G35128.1 ATGTACGGCCGTGATTCCTCCCTAAGATAAGAAGGTGAAATGATTACCCTTGAGTCAATGGCTTTTTGGAAACGTTTGATCTTATACTTG 23 29058765 0.987055649 12 21 181 0.90625 1.462397998 0.125 0.347826087 0.53125 23 3 0 29 3R:29058690-29058779 6 14 3751 FBgn0039631 118 4.676666667 7.163333333 0.118644068 2.993585175 1.954397394 -8 1 -3.5 0.1 dme-miR-8-3p 6mer2-7 AGTATT 3R 29058855 29058860 + 3R_29058855_29058860_+ 0.999938777 0.999641125 0.999789951 0.000210506 Sirt7 FBtr0085364 29058678 29059204 3R + 29058820 29058873 3'utr Sirt7 FlyBase G46566.1 GACCTGCCCTCACCGAGACATATGCTCGCTTCAATAGTATTTTAGCTATAGGTT 8 29058861 0.990437832 4 7 71 0.888888889 0.602059991 0.111111111 0.125 0.222222222 8 0 1 8 3R:29058820-29058873 6 Sirt7 FBtr0085364 29058678 29059204 AGTATT 6mer2-7 dme-miR-8-3p 3R + 29058796 29058874 3'utr Sirt7 FlyBase G35129.1 TGTTTCTTTTCTACGGAAAAGATCGACCTGCCCTCACCGAGACATATGCTCGCTTCAATAGTATTTTAGCTATAGGTTT 10 29058861 0.987003804 5 10 84 1 1.230448921 0 0.4 0.647058824 10 0 0 17 3R:29058796-29058874 6 5.5 3752 FBgn0039631 118 4.676666667 7.163333333 0.046610169 1.176051319 0.767798976 -6 -6 -6 0.1 dme-miR-980-3p 6mer3-8 GGCAGC 3R 29059718 29059723 - 3R_29059718_29059723_- 0.99999861 0.99999999 0.9999993 9.90E-07 Cul5 FBtr0085417 29059270 29059952 3R - 29059680 29059744 3'utr Cul5 FlyBase G55498.1 TAAAAGACCCACACTCCAATCGGCAGCCATTTTCTCGTGTCCACGTCCTGTATTTGTGAAACTTT 43 29059725 0.931828011 7 42 222 0.980769231 1.707570176 0.096153846 0.186046512 0.326923077 43 1 0 51 3R:29059680-29059744 6 Cul5 FBtr0085417 29059270 29059952 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 29059710 29059744 3'utr Cul5 FlyBase G41879.2 TAAAAGACCCACACTCCAATCGGCAGCCATTTTCT 15 29059725 0.966945703 3 13 62 0.952380952 1.301029996 0.047619048 0.266666667 0.476190476 15 1 0 20 3R:29059710-29059744 6 27 3753 FBgn0039632 438.4633333 15.78333333 23.95 0.061578695 1.710665259 1.127348643 2 2 2 0.1 dme-miR-980-5p 7mer-m1 AAAAACT 3R 29059867 29059873 - 3R_29059867_29059873_- 0.765379271 0.578133085 0.671756178 0.132403058 Cul5 FBtr0085417 29059270 29059952 3R - 29059836 29059948 3'utr Cul5 FlyBase G55500.1 CTGCTCCTGATCCCGGCTCTAGTCTCAGTCCCGTCTATGCAGTCATTCCCATTTCCATTCCCTCACACGCTACTCAAAAACTATTGCGATTTTAATCTCAACGCCGACGTGCT 27 29059858 0.979738031 11 27 192 1 1.477121255 0.133333333 0.111111111 0.2 27 0 0 30 3R:29059836-29059948 7 Cul5 FBtr0085417 29059270 29059952 AAAAACT 7mer-m1 dme-miR-980-5p 3R - 29059814 29059962 stop_codon Cul5 FlyBase G41880.1 CGTGGCCTAAGCAGCTGCTCCTGATCCCGGCTCTAGTCTCAGTCCCGTCTATGCAGTCATTCCCATTTCCATTCCCTCACACGCTACTCAAAAACTATTGCGATTTTAATCTCAACGCCGACGTGCTCAAAGCACGCGCCCTTTTTCTG 18 29059858 0.986635598 12 13 112 0.78125 1.096910013 0.25 0.333333333 0.625 18 6 1 25 3R:29059814-29059962 7 7 3754 FBgn0039632 438.4633333 15.78333333 23.95 0.015964847 0.443505808 0.292275574 -15 -15 -15 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 29108426 29108431 + 3R_29108426_29108431_+ 0.999956576 0.999999974 0.999978275 3.07E-05 CG11873 FBtr0330299|FBtr0330301|FBtr0330300 29106782|29106701|29106701 29108948|29108948|29108948 3R + 29108410 29108443 3'utr CG11873 FlyBase G46588.1 TCCCGTGTGAGTTGCATGATCTTGTATTTCTATT 12 29108426 0.831970843 2 11 108 1 1.146128036 0 0.181818182 0.357142857 11 0 0 14 3R:29108410-29108443 6 CG11873 FBtr0330300|FBtr0330301|FBtr0330299 29106701|29106701|29106782 29108948|29108948|29108948 TGATCT 6mer3-8 dme-bantam-3p 3R + 29108395 29108437 3'utr CG11873 FlyBase G35142.1 CCCACCTGCCTAGCGTCCCGTGTGAGTTGCATGATCTTGTATT 9 29108426 0.98706224 3 9 71 1 1.176091259 0.066666667 0.444444444 0.666666667 9 0 0 15 3R:29108395-29108437 6 9.5 3755 FBgn0039633 879.82 9.466666667 14.51 0.010797663 1.003521127 0.654720882 0 0 0 0.1 dme-miR-184-5p 6mer3-8 TGATAA 3R 29109378 29109383 - 3R_29109378_29109383_- 1 0.999999993 0.999999997 0 alpha-Man-Ib FBtr0085416 29109051 29109880 3R - 29109362 29109407 3'utr alpha-Man-Ib FlyBase G55513.1 TCGATTGTATAATATTCTGTGTACTGATAATTGTTATTTTGTAATT 24 29109390 0.643471361 6 23 257 1 1.397940009 0.08 0.041666667 0.08 24 0 0 25 3R:29109362-29109407 6 alpha-Man-Ib FBtr0085416 29109051 29109880 TGATAA 6mer3-8 dme-miR-184-5p 3R - 29109367 29109399 3'utr alpha-Man-Ib FlyBase G41889.1 ATAATATTCTGTGTACTGATAATTGTTATTTTG 13 29109387 0.695193212 6 11 155 0.863636364 1.278753601 0 0.461538462 0.681818182 13 3 0 19 3R:29109367-29109399 6 18 3756 FBgn0039634 927.67 35.07666667 53.86333333 0.019403452 0.513161646 0.334179095 7 4 5.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 29118536 29118541 - 3R_29118536_29118541_- 0.993733864 0.999999989 0.996866927 0.004430802 yem FBtr0085415|FBtr0330292 29118328|29118328 29118881|29118584 3R - 29118496 29118561 3'utr yem FlyBase G55527.1 TTGCGATTCTAATCTAAGATTCTAGTGCTGATTCTAGGTAGGTTTCATTCGCAGCTGTGTCTGCCG 6 29118533 0.992335863 5 5 59 1 0.903089987 0 0.333333333 0.5 6 0 0 8 3R:29118496-29118561 6 yem FBtr0085415|FBtr0330292 29118328|29118328 29118881|29118584 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R - 29118502 29118557 3'utr yem FlyBase G41897.1 GATTCTAATCTAAGATTCTAGTGCTGATTCTAGGTAGGTTTCATTCGCAGCTGTGT 10 29118541 0.990213146 6 10 91 1 1.113943352 0.153846154 0.3 0.461538462 10 0 0 13 3R:29118502-29118557 6 6.5 3757 FBgn0005596 782.6666667 22.29666667 34.15 0.00830494 0.291523397 0.19033675 -8 0 -4 0.1 dme-miR-980-3p 6mer2-7 GCAGCT 3R 29145551 29145556 + 3R_29145551_29145556_+ 0.617904009 0.999999906 0.808951957 0.270182602 CG14516 FBtr0085383|FBtr0085382|FBtr0335406 29145497|29145497|29145497 29145787|29145787|29145787 3R + 29145540 29145594 3'utr CG14516 FlyBase G46650.1 TATTAGATTTCGCAGCTGCAACTGCATGGGTTGGGCCACCAATGCATTTATGTGT 14 29145548 0.76462622 7 13 99 0.941176471 0.903089987 0.352941176 0.214285714 0.352941176 14 0 1 16 3R:29145540-29145594 6 CG14516 FBtr0335406|FBtr0085382|FBtr0085383 29145497|29145497|29145497 29145787|29145787|29145787 GCAGCT 6mer2-7 dme-miR-980-3p 3R + 29145506 29145561 3'utr CG14516 FlyBase G35186.1 ATTCTGCGGCTTGGCTGGATCAAGGCTGCAGCAGTATTAGATTTCGCAGCTGCAAC 6 29145548 0.969068283 4 6 35 1 1.113943352 0.307692308 0.5 0.769230769 6 0 0 13 3R:29145506-29145561 6 3.5 3758 FBgn0039640 168.03 5.77 8.72 0.020829614 0.606585789 0.401376147 3 3 3 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 29145582 29145589 + 3R_29145582_29145589_+ 0.617825671 0.623415566 0.620620619 0.003952656 CG14516 FBtr0085383|FBtr0085382|FBtr0335406 29145497|29145497|29145497 29145787|29145787|29145787 3R + 29145540 29145594 3'utr CG14516 FlyBase G46650.1 TATTAGATTTCGCAGCTGCAACTGCATGGGTTGGGCCACCAATGCATTTATGTGT 14 29145582 0.76462622 7 13 99 0.941176471 0.903089987 0.352941176 0.214285714 0.352941176 14 0 1 16 3R:29145540-29145594 8 CG14516 FBtr0335406|FBtr0085382|FBtr0085383 29145497|29145497|29145497 29145787|29145787|29145787 TGCATTTA 8mer-A1 dme-miR-277-3p 3R + 29145567 29145601 3'utr CG14516 FlyBase G35187.1 GGGTTGGGCCACCAATGCATTTATGTGTAATATTT 6 29145587 0.736312023 4 6 42 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3R:29145567-29145601 8 7.5 3759 FBgn0039640 168.03 5.77 8.72 0.044634887 1.29982669 0.860091743 0 -5 -2.5 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 29145737 29145744 + 3R_29145737_29145744_+ 0.500120318 0.500120046 0.500120182 2.12E-07 CG14516 FBtr0085383|FBtr0085382|FBtr0335406 29145497|29145497|29145497 29145787|29145787|29145787 3R + 29145634 29145791 3'utr CG14516 FlyBase G46651.2 AAGAGAGAAAGCCCTTGGCAGATCGTCCAGAGCATCACGTTTTTCATTACTTTTAATGTATGCCTTCTTTTCATAACAATTATGAGTCTTGTAATTTTAATTTGTACTTAAATGTAATTGTAAATGTAAATGGAATTATAACATTGTTCGTCACAAAA 53 29145716 0.990092391 22 51 496 0.967213115 1.770852012 0.245901639 0.132075472 0.245901639 53 2 0 59 3R:29145634-29145791 8 CG14516 FBtr0335406|FBtr0085382|FBtr0085383 29145497|29145497|29145497 29145787|29145787|29145787 GTACTTAA 8mer-A1 dme-miR-252-5p 3R + 29145704 29145760 3'utr CG14516 FlyBase G35188.1 TCATAACAATTATGAGTCTTGTAATTTTAATTTGTACTTAAATGTAATTGTAAATGT 11 29145716 0.790802347 5 10 117 0.928571429 1.113943352 0.142857143 0.272727273 0.428571429 11 1 0 13 3R:29145704-29145760 8 13.5 3760 FBgn0039640 168.03 5.77 8.72 0.080342796 2.339688042 1.548165138 21 21 21 0.1 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3R 29147104 29147109 - 3R_29147104_29147109_- 0.998383685 0.939289671 0.968836678 0.041785768 CG11882 FBtr0335407|FBtr0085411 29147014|29147014 29147192|29147192 3R - 29147080 29147136 3'utr CG11882 FlyBase G55548.1 TATTTTGTAATTGTTGTAAAAGACTGTTGGTGCGAATATTTCGAATGTGATTAGGCA 71 29147110 0.839739369 7 68 501 0.966292135 1.457377197 0.325842697 0.197183099 0.359550562 71 1 2 86 3R:29147080-29147136 6 CG11882 FBtr0085411|FBtr0335407 29147014|29147014 29147192|29147192 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3R - 29147080 29147140 3'utr CG11882 FlyBase G41917.1 ATTGTATTTTGTAATTGTTGTAAAAGACTGTTGGTGCGAATATTTCGAATGTGATTAGGCA 51 29147110 0.98323519 10 49 372 0.971830986 1.838849091 0.295774648 0.294117647 0.492957746 51 2 0 69 3R:29147080-29147140 6 59.5 3761 FBgn0039642 68.66666667 8.353333333 12.70666667 0.866504854 7.122905028 4.682581322 1 1 1 0.1 dme-miR-965-3p 7mer-m8 TACGCTT 3R 29149797 29149803 + 3R_29149797_29149803_+ 0.620204855 0.620204855 0.620204855 0 Pglym78 FBtr0100483|FBtr0100482|FBtr0085384 29149734|29149734|29149734 29149901|29149901|29149901 3R + 29149739 29149869 3'utr Pglym78 FlyBase G46655.1 CGCAGGCCACACCTCATGAGAATCCACTCAAATACGGCACAAGTCAGAGCATTCTGATTACGCTTCTGTTCAAGATGTAGCCAATCCCATTCGTTGTTGTTGTTCGCGTAGCAGTAATTGGTTCATCCCCA 70 29149796 0.986152669 14 68 579 0.987951807 1.913813852 0.409638554 0.157142857 0.289156627 70 1 0 82 3R:29149739-29149869 7 Pglym78 FBtr0085384|FBtr0100482|FBtr0100483 29149734|29149734|29149734 29149901|29149901|29149901 TACGCTT 7mer-m8 dme-miR-965-3p 3R + 29149742 29149846 3'utr Pglym78 FlyBase G35189.1 AGGCCACACCTCATGAGAATCCACTCAAATACGGCACAAGTCAGAGCATTCTGATTACGCTTCTGTTCAAGATGTAGCCAATCCCATTCGTTGTTGTTGTTCGCG 33 29149797 0.986685174 8 31 258 0.963636364 1.247154615 0.309090909 0.40625 0.654545455 32 0 2 53 3R:29149742-29149846 7 41 3762 FBgn0014869 753.3333333 91.53 139.47 0.054424779 0.447940566 0.293970029 1 0 0.5 0.1 dme-miR-8-3p 7mer-A1 AGTATTA 3R 29164609 29164615 + 3R_29164609_29164615_+ 0.823349562 0.823349561 0.823349562 0 CG11897 FBtr0085386|FBtr0085387 29164548|29164548 29164966|29164966 3R + 29164563 29164625 3'utr CG11897 FlyBase G46685.1 TCATCTACTTGTAGATTTGCTTAAGGTTTAGATCATAAGAACTGAAAGTATTATGTACATAGC 24 29164598 0.979632951 6 22 159 0.90625 1.161368002 0.0625 0.291666667 0.46875 24 2 1 29 3R:29164563-29164625 7 CG11897 FBtr0085387|FBtr0085386 29164548|29164548 29164966|29164966 AGTATTA 7mer-A1 dme-miR-8-3p 3R + 29164562 29164624 3'utr CG11897 FlyBase G35211.1 CTCATCTACTTGTAGATTTGCTTAAGGTTTAGATCATAAGAACTGAAAGTATTATGTACATAG 23 29164598 0.979230709 7 22 154 0.967741935 1.176091259 0.419354839 0.347826087 0.516129032 23 0 1 30 3R:29164562-29164624 7 20.5 3763 FBgn0039644 385.6666667 9.473333333 14.69333333 0.05315471 2.163969036 1.395190563 11 11 11 0.1 dme-miR-252-5p 7mer-m8 GTACTTA 3R 29164664 29164670 + 3R_29164664_29164670_+ 0.588299916 0.588294721 0.588297318 3.68E-06 CG11897 FBtr0085386|FBtr0085387 29164548|29164548 29164966|29164966 3R + 29164643 29164687 3'utr CG11897 FlyBase G46686.1 TAACGAAATACCTATTGCCTTGTACTTACGGAATATTTGTAAGCT 18 29164662 0.690893157 5 17 133 1 1.301029996 0.15 0.111111111 0.2 18 0 0 20 3R:29164643-29164687 7 CG11897 FBtr0085387|FBtr0085386 29164548|29164548 29164966|29164966 GTACTTA 7mer-m8 dme-miR-252-5p 3R + 29164641 29164676 3'utr CG11897 FlyBase G35212.1 GCTAACGAAATACCTATTGCCTTGTACTTACGGAAT 14 29164658 0.697929763 3 10 92 0.818181818 0.77815125 0.045454545 0.428571429 0.636363636 14 2 2 18 3R:29164641-29164676 7 13.5 3764 FBgn0039644 385.6666667 9.473333333 14.69333333 0.035004322 1.42505278 0.918784029 2 6 4 0.1 dme-miR-252-5p 6mer3-8 GTACTT 3R 29164864 29164869 + 3R_29164864_29164869_+ 0.995079194 0.986428107 0.990753651 0.006117251 CG11897 FBtr0085386|FBtr0085387 29164548|29164548 29164966|29164966 3R + 29164794 29164877 3'utr CG11897 FlyBase G46688.1 GAAAGCAATTCGCAAACGCCGTGCACAAATCAGAGCAAGTTCAATTAAACGAAGACAAATAGTGATTTAGGTACTTTTTTAAAA 55 29164860 0.975444232 5 54 340 0.984615385 1.806179974 0.046153846 0.127272727 0.261538462 55 1 0 64 3R:29164794-29164877 6 CG11897 FBtr0085387|FBtr0085386 29164548|29164548 29164966|29164966 GTACTT 6mer3-8 dme-miR-252-5p 3R + 29164795 29164937 3'utr CG11897 FlyBase G35213.1 AAAGCAATTCGCAAACGCCGTGCACAAATCAGAGCAAGTTCAATTAAACGAAGACAAATAGTGATTTAGGTACTTTTTTAAAATATGTAGCTAATGTAGGATTACCACATCGTACTTATAGATACGTACAATCTCAATAAAGT 45 29164860 0.981385763 11 41 293 0.939393939 1.491361694 0.136363636 0.333333333 0.545454545 45 3 1 62 3R:29164795-29164937 6 38 3765 FBgn0039644 385.6666667 9.473333333 14.69333333 0.098530683 4.011259676 2.586206897 4 4 4 0.1 dme-miR-304-5p 7mer-m8 TGAGATT 3R 29221864 29221870 + 3R_29221864_29221870_+ 0.620203314 0.62020336 0.620203337 7.07E-08 Ef1gamma FBtr0085393|FBtr0085392|FBtr0302442 29221775|29221775|29221775 29222109|29222109|29222109 3R + 29221745 29222006 stop_codon Ef1gamma FlyBase G46701.1 GCAAGTTCAACCAGGGCAAGATCTTCAAGTAATCATCTCTGCCTAGCCCAGCTCCGCTCAAAGCAGCAGCCGCCCTCATTTAGACCAACAACAACAACAGCAGCAGTAACAATAAAGTTTGAGATTTAAAATGCAGGAAGAGCACAATGCCCATTTCTTAAGTTCCAACTGATAAGTACACTAAAGATATCCAATATCTGTCGTGCTGCCTCCCACGTTTGGCGGAATCGTGTGTCTCGCCTCCTGCATTTTGTACTGGAGA 65 29221863 0.975518867 26 57 360 0.871794872 1.054357662 0.205128205 0.169230769 0.307692308 65 5 5 68 3R:29221745-29222006 7 Ef1gamma FBtr0302442|FBtr0085392|FBtr0085393 29221775|29221775|29221775 29222109|29222109|29222109 TGAGATT 7mer-m8 dme-miR-304-5p 3R + 29221752 29221924 stop_codon Ef1gamma FlyBase G35225.1 CAACCAGGGCAAGATCTTCAAGTAATCATCTCTGCCTAGCCCAGCTCCGCTCAAAGCAGCAGCCGCCCTCATTTAGACCAACAACAACAACAGCAGCAGTAACAATAAAGTTTGAGATTTAAAATGCAGGAAGAGCACAATGCCCATTTCTTAAGTTCCAACTGATAAGTACA 32 29221863 0.97091587 13 29 168 0.954545455 1.62324929 0.295454545 0.375 0.545454545 32 2 0 42 3R:29221752-29221924 7 17 3766 FBgn0029176 8118.963333 592.2866667 901.75 0.002093863 0.028702318 0.018852232 1 1 1 0.1 dme-miR-283-5p 7mer-m8 TGATATT 3R 29222040 29222046 + 3R_29222040_29222046_+ 0.619633087 0.620203408 0.619918247 0.000403263 Ef1gamma FBtr0085393|FBtr0085392|FBtr0302442 29221775|29221775|29221775 29222109|29222109|29222109 3R + 29222028 29222075 3'utr Ef1gamma FlyBase G46702.1 CATAACACAGCATGATATTGTCAACGGAACAGCCGCCTGCAGTCAGAA 10 29222045 0.823103133 4 10 32 1 1.113943352 0.230769231 0.2 0.384615385 10 0 0 13 3R:29222028-29222075 7 Ef1gamma FBtr0302442|FBtr0085392|FBtr0085393 29221775|29221775|29221775 29222109|29222109|29222109 TGATATT 7mer-m8 dme-miR-283-5p 3R + 29222025 29222083 3'utr Ef1gamma FlyBase G35226.1 AAGCATAACACAGCATGATATTGTCAACGGAACAGCCGCCTGCAGTCAGAAAATATTTA 11 29222043 0.954670349 6 11 51 1 1.113943352 0.307692308 0.181818182 0.307692308 11 0 0 13 3R:29222025-29222083 7 8 3767 FBgn0029176 8118.963333 592.2866667 901.75 0.000985347 0.013506973 0.008871638 -5 -3 -4 0.1 dme-miR-283-5p 8mer-A1 TGATATTA 3R 29235069 29235076 + 3R_29235069_29235076_+ 0.592192248 0.592192282 0.592192265 7.07E-08 CG15817 FBtr0300833|FBtr0333818|FBtr0300832 29233962|29233962|29233962 29235162|29235302|29235162 3R + 29235037 29235120 3'utr CG15817 FlyBase G46717.1 AGTTCTATTTTTTTCCAAGAGCGCTGCTATAGTGATATTAACATTTACAGAGCAAAGATTTGTGTACATTGTAATTTGTAAAGT 101 29235065 0.71315795 10 96 729 0.935483871 1.763427994 0.088709677 0.178217822 0.330645161 101 7 1 116 3R:29235037-29235120 8 CG15817 FBtr0300832|FBtr0333818|FBtr0300833 29233962|29233962|29233962 29235162|29235302|29235162 TGATATTA 8mer-A1 dme-miR-283-5p 3R + 29235037 29235128 3'utr CG15817 FlyBase G35239.1 AGTTCTATTTTTTTCCAAGAGCGCTGCTATAGTGATATTAACATTTACAGAGCAAAGATTTGTGTACATTGTAATTTGTAAAGTTTACATAT 62 29235097 0.961602065 12 62 458 1 1.986771734 0.12371134 0.338709677 0.577319588 62 0 0 97 3R:29235037-29235128 8 54 3768 FBgn0028476 401.67 10.06 15.48 0.134438718 5.367793241 3.488372093 4 -28 -12 0.1 dme-miR-317-3p 6mer2-7 GTGTTC 3R 29315599 29315604 - 3R_29315599_29315604_- 0.993497287 0.997821056 0.995659172 0.003057388 Cnx99A FBtr0085438|FBtr0334873|FBtr0085437 29315252|29315252|29315252 29315834|29315834|29315834 3R - 29315572 29315669 3'utr Cnx99A FlyBase G55596.1 ACACACTCGTTTCGGTTTAGTCAACTCTGTACGTACTTTTGCCGTATTATCGTTGCATTTCTGTCGTGTTCGACCCTCTGTCGTCCCCATATCTCCTA 17 29315590 0.672654886 12 14 148 0.842105263 0.726998728 0.052631579 0.117647059 0.210526316 17 1 2 16 3R:29315572-29315669 6 Cnx99A FBtr0085437|FBtr0085438|FBtr0334873 29315252|29315252|29315252 29315834|29315834|29315834 GTGTTC 6mer2-7 dme-miR-317-3p 3R - 29315576 29315671 3'utr Cnx99A FlyBase G41952.1 ACACACACTCGTTTCGGTTTAGTCAACTCTGTACGTACTTTTGCCGTATTATCGTTGCATTTCTGTCGTGTTCGACCCTCTGTCGTCCCCATATCT 11 29315590 0.986944929 9 10 95 0.947368421 1.255272505 0.105263158 0.545454545 0.736842105 11 1 0 18 3R:29315576-29315671 6 6.5 3769 FBgn0015622 4351.313333 201.68 309.1566667 0.001493802 0.032229274 0.021024939 -14 -14 -14 0.1 dme-miR-184-3p 7mer-m8 TCCGTCC 3R 29485121 29485127 + 3R_29485121_29485127_+ 0.661614694 0.661615065 0.66161488 2.83E-07 Ptp99A FBtr0303148|FBtr0303454|FBtr0085422|FBtr0085424 29484488|29484488|29484488|29484488 29486704|29487131|29486704|29486704 3R + 29485107 29485145 5'utr Ptp99A FlyBase G46727.1 TCGAATCGATTCAGTCCGTCCTAGTATCTGTTATTCTTT 10 29485116 0.688481828 5 10 82 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 3R:29485107-29485145 7 Ptp99A FBtr0085422|FBtr0085424|FBtr0303148|FBtr0303454 29484488|29484488|29484488|29484488 29486704|29486704|29486704|29487131 TCCGTCC 7mer-m8 dme-miR-184-3p 3R + 29485106 29485142 5'utr Ptp99A FlyBase G35249.1 TTCGAATCGATTCAGTCCGTCCTAGTATCTGTTATTC 9 29485117 0.718774042 5 8 62 0.916666667 0.740362689 0.333333333 0.333333333 0.5 9 0 1 11 3R:29485106-29485142 7 9.5 3770 FBgn0004369 285.67 6.166666667 9.486666667 0.033255155 1.540540541 1.001405481 5 4 4.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 29499269 29499274 - 3R_29499269_29499274_- 0.998961629 0.998686338 0.998823983 0.000194666 Trc8 FBtr0085432|FBtr0085430|FBtr0333188|FBtr0085429 29499023|29499023|29499023|29499120 29499641|29499641|29499641|29499641 3R - 29499250 29499317 coding-3'utr Trc8 FlyBase G55625.1 AGCTGAACGCTGATCGGCAATGAGACGATAATTCAAACGGAGATGATCTACATATGTACGTTAAGTTT 29 29499274 0.928069783 3 25 148 0.861111111 1.014240439 0.111111111 0.24137931 0.388888889 29 3 2 31 3R:29499250-29499317 6 Trc8 FBtr0085432|FBtr0085430|FBtr0333188|FBtr0085429 29499023|29499023|29499023|29499120 29499641|29499641|29499641|29499641 TGATCT 6mer3-8 dme-bantam-3p 3R - 29499245 29499312 3'utr Trc8 FlyBase G41970.1 AACGCTGATCGGCAATGAGACGATAATTCAAACGGAGATGATCTACATATGTACGTTAAGTTTATGGT 31 29499297 0.940686461 6 22 161 0.723404255 0.62838893 0.170212766 0.387096774 0.595744681 31 6 7 34 3R:29499245-29499312 6 17.5 3771 FBgn0039668 519.2566667 17.16333333 26.17333333 0.033702023 1.019615459 0.66861946 0 23 11.5 0.1 dme-miR-965-3p 6mer3-8 TACGCT 3R 29599189 29599194 + 3R_29599189_29599194_+ 0.99992389 0.999949829 0.99993686 1.83E-05 alph FBtr0085445|FBtr0085443|FBtr0085446|FBtr0085442 29598177|29597798|29598177|29598177 29599231|29599234|29599231|29599231 3R + 29599164 29599211 5'utr alph FlyBase G46750.2 AAATCTTAAGAGAGAAAAGCAAAATTACGCTCGAGTTTGTAGTAAATG 159 29599188 0.881126017 6 154 790 0.971098266 1.62324929 0.144508671 0.088050314 0.161849711 159 2 3 168 3R:29599164-29599211 6 alph FBtr0085443|FBtr0085446|FBtr0085442|FBtr0085445 29597798|29598177|29598177|29598177 29599234|29599231|29599231|29599231 TACGCT 6mer3-8 dme-miR-965-3p 3R + 29599164 29599209 5'utr alph FlyBase G35264.1 AAATCTTAAGAGAGAAAAGCAAAATTACGCTCGAGTTTGTAGTAAA 65 29599188 0.958281791 4 63 302 0.956989247 1.472268752 0.096774194 0.369230769 0.559139785 65 2 2 89 3R:29599164-29599209 6 110.5 3772 FBgn0086361 5795.586667 263.87 406.87 0.019066232 0.418766817 0.271585519 1 1 1 0.1 dme-miR-79-3p 6mer3-8 TAGCTT 3R 29620687 29620692 + 3R_29620687_29620692_+ 0.999995911 0.999425271 0.999710591 0.000403475 CG1907 FBtr0085447 29620554 29620758 3R + 29620613 29620754 3'utr CG1907 FlyBase G46753.1 CGACGTTAAGTTTAAAGAAAACTTAGGGCATTTATATGTCGGCAATTCCGGTGACAATATTACATGATAACGATTAGCTTGAATGTTGAAACAGTTTTTCTAGCGCCATAAGTATAAAGTGGATTCTCAATAAAGCACAAAA 28 29620686 0.978554358 17 27 184 0.96875 1.190331698 0.28125 0.142857143 0.25 28 0 1 31 3R:29620613-29620754 6 CG1907 FBtr0085447 29620554 29620758 TAGCTT 6mer3-8 dme-miR-79-3p 3R + 29620653 29620699 3'utr CG1907 FlyBase G35266.1 GGCAATTCCGGTGACAATATTACATGATAACGATTAGCTTGAATGTT 8 29620686 0.972501854 2 8 49 1 1.113943352 0.461538462 0.375 0.615384615 8 0 0 13 3R:29620653-29620699 6 8 3773 FBgn0039674 372.3333333 27.88666667 42.61 0.021486124 0.286875448 0.187749355 1 1 1 0.1 dme-miR-33-5p 7mer-A1 AATGCAA 3R 29753170 29753176 + 3R_29753170_29753176_+ 0.748036407 0.728709381 0.738372894 0.013666253 yata FBtr0333822|FBtr0085477 29752956|29752956 29754528|29753328 3R + 29753116 29753202 3'utr yata FlyBase G46828.1 CATTTGGCCGCTCTGTGTGTGCTTTGTGTTTGTATTGGGTGCCAGTTTGCATTAAATGCAATCTCAGTGTCTCGAGCCTCCATTTCG 35 29753172 0.776217084 10 32 263 0.926829268 1.579783597 0.219512195 0.114285714 0.243902439 35 3 0 38 3R:29753116-29753202 7 yata FBtr0333822|FBtr0085477 29752956|29752956 29754528|29753328 AATGCAA 7mer-A1 dme-miR-33-5p 3R + 29753114 29753205 3'utr yata FlyBase G35323.1 CCCATTTGGCCGCTCTGTGTGTGCTTTGTGTTTGTATTGGGTGCCAGTTTGCATTAAATGCAATCTCAGTGTCTCGAGCCTCCATTTCGATT 23 29753183 0.979708004 14 23 185 1 1.505149978 0.25 0.304347826 0.5 23 0 0 32 3R:29753114-29753205 7 19.5 3774 FBgn0260990 1641.69 44.94333333 68.84666667 0.011878004 0.4338797 0.283238114 -2 -13 -7.5 0.1 dme-miR-305-3p 6mer3-8 ATGTGC 3R 29753495 29753500 + 3R_29753495_29753500_+ 0.999999999 0.992462293 0.996231146 0.005329959 yata FBtr0333822 29752956 29754528 3R + 29753479 29753551 3'utr yata FlyBase G46831.1 GAGCGAATGGATATGGATGTGCGTGTGTCTGATTTCAAAACCCATTTTAGTCGCCCCTTTCCAAAGGCTAACA 8 29753497 0.974708036 8 8 44 1 0.954242509 0.111111111 0.125 0.222222222 8 0 0 9 3R:29753479-29753551 6 yata FBtr0333822 29752956 29754528 ATGTGC 6mer3-8 dme-miR-305-3p 3R + 29753479 29753522 3'utr yata FlyBase G35326.1 GAGCGAATGGATATGGATGTGCGTGTGTCTGATTTCAAAACCCA 5 29753504 0.983294682 4 5 32 1 0.698970004 0.2 0 0 5 0 0 5 3R:29753479-29753522 6 4.5 3775 FBgn0260990 1641.69 44.94333333 68.84666667 0.002741078 0.100126085 0.065362642 -2 -9 -5.5 0.1 dme-miR-1006-3p 6mer2-7 GAATTT 3R 29753657 29753662 + 3R_29753657_29753662_+ 0.999997237 0.999998853 0.999998045 1.20E-06 yata FBtr0333822 29752956 29754528 3R + 29753567 29753674 3'utr yata FlyBase G46832.1 GATGCCAATCCACGCGATTTTCGAGGGACAGTGAATATTTAGAAATCTAAACTAAACGTATTTTTGCGAATGGAGCGTAACCAAAATTGTGAATTTTAATACATAAAT 99 29753653 0.98167078 12 98 719 0.991935484 2.089905111 0.072580645 0.191919192 0.35483871 99 1 0 123 3R:29753567-29753674 6 yata FBtr0333822 29752956 29754528 GAATTT 6mer2-7 dme-miR-1006-3p 3R + 29753569 29753674 3'utr yata FlyBase G35327.1 TGCCAATCCACGCGATTTTCGAGGGACAGTGAATATTTAGAAATCTAAACTAAACGTATTTTTGCGAATGGAGCGTAACCAAAATTGTGAATTTTAATACATAAAT 64 29753653 0.981141553 10 64 470 1 2.008600172 0.049019608 0.453125 0.656862745 64 0 0 102 3R:29753569-29753674 6 71 3776 FBgn0260990 1641.69 44.94333333 68.84666667 0.043248116 1.579767114 1.031277234 4 4 4 0.1 dme-miR-33-5p 7mer-A1 AATGCAA 3R 29793658 29793664 + 3R_29793658_29793664_+ 0.765188632 0.770477613 0.767833122 0.003739888 kay FBtr0099990|FBtr0099988|FBtr0290076|FBtr0099989|FBtr0339165 29793023|29793023|29793023|29793023|29793023 29794113|29794113|29794113|29794113|29794113 3R + 29793243 29793681 3'utr kay FlyBase G46861.3 TGATTTCGCTATGTCTTTTACATACGCCGAGGAGCTATGTACATATGTTATGTACTTGTAATTTGTGCAATTTTCAAACCTCTTCATTGCGCGTTGTATATTTTCAAAAAATATAAGAACGCGAACGCGAACGCGAACGACCGACGATGCATGATGAGAATGATAAGGATAATGATGATAATAGGGCGTGTAGATTTGCAGGATGCGTTGTGATATTTATTATAAAACGAATACAAAAGATGCGAGGATGAAACAAAGTAGAAAGCAAACAGGAGCGTCTAATGAAAGGAACTAAGCCGGTTTTAAAATTGTACATTTAAACGAATCGTAAAGCGTAAATATACTATAAAACAAAACAAAGTGAATATATATTCAGCATACAAACTAAATACAATGCCTTGAGAGAGAATTAAGAAATGCAAACCTTTATATATAGAGA 1895 29793652 0.982144577 81 1793 12918 0.946983547 1.811239773 0.099634369 0.131926121 0.248171846 1895 85 31 2072 3R:29793243-29793681 7 kay FBtr0099989|FBtr0339165|FBtr0099988|FBtr0290076|FBtr0099990 29793023|29793023|29793023|29793023|29793023 29794113|29794113|29794113|29794113|29794113 AATGCAA 7mer-A1 dme-miR-33-5p 3R + 29793591 29793681 3'utr kay FlyBase G35357.2 AAACAAAACAAAGTGAATATATATTCAGCATACAAACTAAATACAATGCCTTGAGAGAGAATTAAGAAATGCAAACCTTTATATATAGAGA 425 29793652 0.847086296 17 393 2000 0.926948052 1.802393599 0.12012987 0.334117647 0.540584416 425 37 8 571 3R:29793591-29793681 7 582 3777 FBgn0001297 8038.743333 271.3133333 416.43 0.072399376 2.145121262 1.397593833 6 6 6 0.1 dme-miR-304-5p 6mer3-8 TGAGAT 3R 29793772 29793777 + 3R_29793772_29793777_+ 0.999937306 0.999890812 0.999914059 3.29E-05 kay FBtr0099990|FBtr0099988|FBtr0290076|FBtr0099989|FBtr0339165 29793023|29793023|29793023|29793023|29793023 29794113|29794113|29794113|29794113|29794113 3R + 29793713 29793807 3'utr kay FlyBase G46862.1 AAAGCTAAACAATAATGGCGTTGAAGCGAGTTTTATATTGAGCAAAAGCAAATGTGAAATGAGATAAATATACTTATTGTGTACTCTGTAAGCTG 338 29793772 0.863552508 18 318 1418 0.94188862 1.686859614 0.457627119 0.162721893 0.314769976 338 17 7 389 3R:29793713-29793807 6 kay FBtr0099989|FBtr0339165|FBtr0099988|FBtr0290076|FBtr0099990 29793023|29793023|29793023|29793023|29793023 29794113|29794113|29794113|29794113|29794113 TGAGAT 6mer3-8 dme-miR-304-5p 3R + 29793712 29793814 3'utr kay FlyBase G35358.1 TAAAGCTAAACAATAATGGCGTTGAAGCGAGTTTTATATTGAGCAAAAGCAAATGTGAAATGAGATAAATATACTTATTGTGTACTCTGTAAGCTGCAGTAGA 251 29793772 0.882069315 19 239 974 0.942465753 2.536558443 0.534246575 0.326693227 0.536986301 251 21 0 344 3R:29793712-29793814 6 239 3778 FBgn0001297 8038.743333 271.3133333 416.43 0.029731015 0.880900312 0.57392599 0 0 0 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 29800958 29800964 + 3R_29800958_29800964_+ 0.797230741 0.797889748 0.797560244 0.000465983 Drice FBtr0085482|FBtr0085482|FBtr0085482 29800916|29800916|29800916 29801584|29801584|29801584 3R + 29800902 29800976 stop_codon Drice FlyBase G46870.1 AGCCGGACGGGTTTGATGGCTAATGGTATGGATCAAACGGTGGGTACGGCGAGGTGTGTGATAAACCAAGTCGCA 84 29800956 0.961690115 10 77 383 0.920454545 1.306425028 0.079545455 0.035714286 0.079545455 84 4 3 81 3R:29800902-29800976 7 Drice FBtr0085482|FBtr0085482|FBtr0085482 29800916|29800916|29800916 29801584|29801584|29801584 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 29800901 29800978 stop_codon Drice FlyBase G35369.1 CAGCCGGACGGGTTTGATGGCTAATGGTATGGATCAAACGGTGGGTACGGCGAGGTGTGTGATAAACCAAGTCGCAAT 51 29800956 0.946941896 5 49 210 0.95 1.880813592 0.075 0.392156863 0.6125 51 4 0 76 3R:29800901-29800978 7 61 3779 FBgn0019972 801.2566667 50.41666667 76.82666667 0.076130412 1.209917355 0.793995141 2 2 2 0.1 dme-miR-33-5p 7mer-m1 AATGCAC 3R 29801526 29801532 + 3R_29801526_29801532_+ 0.754013913 0.825726973 0.789870443 0.050708819 Drice FBtr0085482 29800916 29801584 3R + 29801494 29801580 3'utr Drice FlyBase G46874.1 ATACTATTTCTATGCCATTTGTACTCTTATATAATGCACATTAGCAAATGTTCTCCTTTCAAGTTAACCGCTAATAAATCCGATTGA 17 29801542 0.987907305 11 17 153 1 1.342422681 0 0.235294118 0.409090909 17 0 0 22 3R:29801494-29801580 7 Drice FBtr0085482 29800916 29801584 AATGCAC 7mer-m1 dme-miR-33-5p 3R + 29801528 29801581 3'utr Drice FlyBase G35374.1 TGCACATTAGCAAATGTTCTCCTTTCAAGTTAACCGCTAATAAATCCGATTGAA 6 29801542 0.979483929 5 6 41 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3R:29801528-29801581 4 3 3780 FBgn0019972 801.2566667 50.41666667 76.82666667 0.003744119 0.059504132 0.039048941 -16 -16 -16 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 29804321 29804326 - 3R_29804321_29804326_- 0.999992759 0.999945516 0.999969138 3.34E-05 ncd FBtr0344976|FBtr0085534 29804288|29804288 29804405|29804405 3R - 29804291 29804362 3'utr ncd FlyBase G55721.1 ACCTGTTATTGCTTAATTTATGTGTGTTTACTTTTAGTGCAAATAAACTAATAAAGTGCTGGAATTCAAAGC 15 29804328 0.989524394 6 15 145 1 1.278753601 0.368421053 0.266666667 0.421052632 15 0 0 19 3R:29804291-29804362 6 ncd FBtr0344976|FBtr0085534 29804288|29804288 29804405|29804405 GTGCAA 6mer3-8 dme-miR-92b-3p 3R - 29804294 29804352 3'utr ncd FlyBase G42042.1 GCTTAATTTATGTGTGTTTACTTTTAGTGCAAATAAACTAATAAAGTGCTGGAATTCAA 9 29804329 0.989776452 5 8 77 1 1.230448921 0.470588235 0.333333333 0.647058824 9 0 0 17 3R:29804294-29804352 6 9.5 3781 FBgn0002924 2335.956667 120.6666667 184.3066667 0.004066856 0.078729282 0.051544527 2 3 2.5 0.1 dme-miR-965-3p 7mer-A1 ACGCTTA 3R 29827492 29827498 - 3R_29827492_29827498_- 0.820698918 0.821785668 0.821242293 0.000768484 Atg16 FBtr0339144|FBtr0085528|FBtr0085529|FBtr0085530 29827279|29827279|29827279|29827279 29827559|29827559|29827559|29827559 3R - 29827417 29827536 3'utr Atg16 FlyBase G55743.2 CTCGAGCCAGTCGGATGCAATCCAATTCCGAAACTGAAACGCTTAAGAAGTCAGAGCAGTGCTGCAATCTGCTGTACATAGTAAATTCGGTCGACGTTTTAACAACTTTACTTGATTATT 30 29827511 0.855641554 10 27 154 0.918918919 1.531478917 0.189189189 0.2 0.351351351 30 3 0 34 3R:29827417-29827536 7 Atg16 FBtr0085530|FBtr0085529|FBtr0085528|FBtr0339144 29827279|29827279|29827279|29827279 29827559|29827559|29827559|29827559 ACGCTTA 7mer-A1 dme-miR-965-3p 3R - 29827456 29827535 3'utr Atg16 FlyBase G42060.2 TCGAGCCAGTCGGATGCAATCCAATTCCGAAACTGAAACGCTTAAGAAGTCAGAGCAGTGCTGCAATCTGCTGTACATAG 19 29827511 0.811113343 9 14 70 0.8 1.301029996 0.08 0.315789474 0.48 19 5 0 20 3R:29827456-29827535 7 9 3782 FBgn0039705 890.6666667 49.85333333 76.6 0.01010479 0.180529553 0.117493473 13 13 13 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 29855685 29855690 - 3R_29855685_29855690_- 0.999888952 0.999868594 0.999878773 1.44E-05 dgt1 FBtr0335006|FBtr0335006|FBtr0335006 29855627|29855627|29855627 29855943|29855943|29855943 3R - 29855673 29855702 3'utr dgt1 FlyBase G55758.1 AAGCAAGCCCTTTGTGATCGACCCTGAATA 17 29855691 0.774802664 3 17 81 1 1.342422681 0.045454545 0.176470588 0.363636364 17 0 0 22 3R:29855673-29855702 6 dgt1 FBtr0335006|FBtr0335006|FBtr0335006 29855627|29855627|29855627 29855943|29855943|29855943 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 29855659 29855709 3'utr dgt1 FlyBase G42073.1 ACTGTCTAAGCAAGCCCTTTGTGATCGACCCTGAATAAATTGCCGACCTCT 11 29855691 0.953786971 3 11 52 1 1.204119983 0 0.363636364 0.5625 11 0 0 16 3R:29855659-29855709 6 13.5 3783 FBgn0039710 509.1766667 36.19333333 55.42333333 0.026513391 0.372996869 0.24357972 1 1 1 0.1 dme-miR-184-5p 7mer-m1 GATAAGG 3R 29860311 29860317 - 3R_29860311_29860317_- 0.811413433 0.492250529 0.651831981 0.225682251 CG15514 FBtr0335005|FBtr0085523 29860053|29860053 29860353|29860353 3R - 29860281 29860344 3'utr CG15514 FlyBase G55772.1 GATTGGAACGGCTTGTGTTTGTAGGTGGATAAGGCGGGCAATATGATTATTTACACTTAGGTAT 12 29860295 0.746866454 6 9 98 0.8 0.602059991 0.066666667 0.166666667 0.333333333 12 1 2 12 3R:29860281-29860344 7 CG15514 FBtr0085523|FBtr0335005 29860053|29860053 29860353|29860353 GATAAGG 7mer-m1 dme-miR-184-5p 3R - 29860282 29860344 3'utr CG15514 FlyBase G42079.1 GATTGGAACGGCTTGTGTTTGTAGGTGGATAAGGCGGGCAATATGATTATTTACACTTAGGTA 15 29860295 0.958005878 9 15 101 1 1.397940009 0.64 0.533333333 0.72 15 0 0 25 3R:29860282-29860344 7 10 3784 FBgn0039712 589 53.38333333 81.62333333 0.016977929 0.187324383 0.122513987 -22 -22 -22 0.1 dme-miR-12-5p 6mer3-8 AATACT 3R 29874608 29874613 + 3R_29874608_29874613_+ 0.999922823 1 0.999961412 5.46E-05 CG34133 FBtr0301073|FBtr0110888|FBtr0335004 29874565|29874565|29874565 29875159|29874817|29875159 3R + 29874545 29874609 stop_codon CG34133 FlyBase G46944.1 CTACACGGCCATTGCGGATTAGTCTTTAGATAGAGGATGGGAGATATAGAAGAGTAAAAGTGAAA 14 29874591 0.972016328 5 13 78 0.941176471 1.204119983 0.529411765 0.214285714 0.352941176 14 1 0 16 3R:29874545-29874609 2 CG34133 FBtr0335004|FBtr0110888|FBtr0301073 29874565|29874565|29874565 29875159|29874817|29875159 AATACT 6mer3-8 dme-miR-12-5p 3R + 29874609 29874676 3'utr CG34133 FlyBase G35427.1 ATACTATTTTATTTTTGTATTCGTGACATTTTGTATCGTTAGTAACTAGCGCCATTGCTGATTTGTAT 21 29874583 0.757921466 10 19 205 0.861111111 1.491361694 0.222222222 0.523809524 0.722222222 21 5 0 31 3R:29874609-29874676 4 2 3785 FBgn0083969 922.7466667 26.26 40.29 0.002167442 0.076161462 0.049640109 17 25 21 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 3R 29874914 29874919 + 3R_29874914_29874919_+ 0.983739589 0.986127188 0.984933389 0.001688288 CG34133 FBtr0301073|FBtr0335004 29874565|29874565 29875159|29875159 3R + 29874872 29874941 3'utr CG34133 FlyBase G46948.1 CGAAAGTCAATTGTATATTGTTATGCCCTTGTAAGTTACATTTTGACTGTACAGATGCTTTGATTTCGTT 21 29874931 0.689624384 11 20 200 0.958333333 1.361727836 0.416666667 0.095238095 0.208333333 21 1 0 23 3R:29874872-29874941 6 CG34133 FBtr0335004|FBtr0301073 29874565|29874565 29875159|29875159 TTGACT 6mer3-8 dme-miR-1012-3p 3R + 29874868 29874941 3'utr CG34133 FlyBase G35429.1 ATTTCGAAAGTCAATTGTATATTGTTATGCCCTTGTAAGTTACATTTTGACTGTACAGATGCTTTGATTTCGTT 10 29874931 0.99052473 6 10 104 1 1.146128036 0.214285714 0.4 0.571428571 10 0 0 14 3R:29874868-29874941 6 12 3786 FBgn0083969 922.7466667 26.26 40.29 0.013004653 0.456968774 0.297840655 -17 -17 -17 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 29902981 29902986 + 3R_29902981_29902986_+ 0.947863877 0.9359515 0.941907688 0.008423339 CG31038 FBtr0085494|FBtr0333274|FBtr0333275|FBtr0085497|FBtr0085498 29902590|29902590|29902590|29902590|29902590 29903231|29903231|29903231|29903231|29903231 3R + 29902953 29903000 3'utr CG31038 FlyBase G46952.1 ACCAGCCTCTGTGGTTAGGAGTCCTTTGTGATCTTCAGTTGTAAGTTT 14 29902986 0.961245604 5 11 140 0.785714286 0.740362689 0.285714286 0 0 14 2 1 11 3R:29902953-29903000 6 CG31038 FBtr0085494|FBtr0085498|FBtr0085497|FBtr0333275|FBtr0333274 29902590|29902590|29902590|29902590|29902590 29903231|29903231|29903231|29903231|29903231 TGATCT 6mer3-8 dme-bantam-3p 3R + 29902955 29903000 3'utr CG31038 FlyBase G35432.1 CAGCCTCTGTGGTTAGGAGTCCTTTGTGATCTTCAGTTGTAAGTTT 13 29902978 0.659194469 4 13 151 1 1.301029996 0.1 0.384615385 0.6 13 0 0 20 3R:29902955-29903000 6 13 3787 FBgn0051038 142.6666667 4.59 7.016666667 0.091121495 2.832244009 1.852731591 -5 3 -1 0.1 dme-miR-7-5p 6mer3-8 GTCTTC 3R 29933964 29933969 + 3R_29933964_29933969_+ 0.997312623 0.999999988 0.998656306 0.001900279 CG42557 FBtr0301256 29933904 29934587 3R + 29933942 29933992 start_codon CG42557 FlyBase G46953.1 AATGGAATCCACGTTCGGTAAAGTCTTCATGTTTCTCACGGACCTCGCTTG 12 29933971 0.983661954 2 12 110 1 1.113943352 0.153846154 0.083333333 0.153846154 12 0 0 13 3R:29933942-29933992 6 CG42557 FBtr0301256 29933904 29934587 GTCTTC 6mer3-8 dme-miR-7-5p 3R + 29933943 29933990 start_codon CG42557 FlyBase G35433.1 ATGGAATCCACGTTCGGTAAAGTCTTCATGTTTCTCACGGACCTCGCT 11 29933971 0.987636358 2 8 103 0.733333333 1.041392685 0.4 0.272727273 0.466666667 11 4 0 11 3R:29933943-29933990 6 11.5 3788 FBgn0260759 80.26 9.18 14.10333333 0.143284326 1.252723312 0.815410069 -7 -7 -7 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 29991254 29991259 - 3R_29991254_29991259_- 0.995596925 0.992938521 0.994267723 0.001879773 Acph-1 FBtr0085610|FBtr0085610|FBtr0085610|FBtr0085609|FBtr0085609|FBtr0085609 29991142|29991142|29991142|29991142|29991142|29991142 29991583|29991583|29991583|29991583|29991583|29991583 3R - 29991227 29991283 3'utr Acph-1 FlyBase G55798.1 AGTGAAAGATATGGAATACAAAGACTGTGAATAGCGATCTTGAAGTTGCATACATAT 45 29991256 0.957190171 5 44 178 1 1.72427587 0.150943396 0.181818182 0.320754717 44 0 0 53 3R:29991227-29991283 6 Acph-1 FBtr0085610|FBtr0085610|FBtr0085610|FBtr0085609|FBtr0085609|FBtr0085609 29991142|29991142|29991142|29991142|29991142|29991142 29991583|29991583|29991583|29991583|29991583|29991583 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 29991238 29991290 3'utr Acph-1 FlyBase G42100.1 GTTATTCAGTGAAAGATATGGAATACAAAGACTGTGAATAGCGATCTTGAAGT 49 29991255 0.806846915 7 48 193 0.984375 1.799340549 0.25 0.224489796 0.40625 49 1 0 63 3R:29991238-29991290 6 44.5 3789 FBgn0000032 305.1533333 19.16 28.97333333 0.145828327 2.322546973 1.535895076 -3 -4 -3.5 0.1 dme-miR-276a-3p 7mer-m8 AGTTCCT 3R 30010093 30010099 + 3R_30010093_30010099_+ 0.616785298 0.611735548 0.614260423 0.003570748 Nlp FBtr0334701|FBtr0085552 30009979|30009979 30010352|30010352 3R + 30009927 30010150 stop_codon Nlp FlyBase G46980.1 AAGATCGAGAACGCCGCCGATGGTAAAAATGCCAAGAACAACAAGAAGAAGTAAACTGCTGACCGCCAATCATCCATCGAGGTTTAAGCTATGAACGTGTAGATTTTAAAGCAAAAACAGTTTTAGGCCCTATAATACAATACGATGCATACTGAGAATACAATCTAGTTCCTTTTGAACAGCTCCTTTTACATTCAATTCAAAGACAACGTTGTGTGCTCGGT 40 30010113 0.999429126 25 38 244 0.94 1.672097858 0.22 0.2 0.36 40 3 0 47 3R:30009927-30010150 7 Nlp FBtr0334701|FBtr0085552 30009979|30009979 30010352|30010352 AGTTCCT 7mer-m8 dme-miR-276a-3p 3R + 30009969 30010134 stop_codon Nlp FlyBase G35448.1 AAGAAGAAGTAAACTGCTGACCGCCAATCATCCATCGAGGTTTAAGCTATGAACGTGTAGATTTTAAAGCAAAAACAGTTTTAGGCCCTATAATACAATACGATGCATACTGAGAATACAATCTAGTTCCTTTTGAACAGCTCCTTTTACATTCAATTCAAAGACA 34 30010100 0.974000295 17 30 187 0.94 1.672097858 0.06 0.441176471 0.62 34 3 0 47 3R:30009969-30010134 7 7.5 3790 FBgn0016685 3113.246667 427.1766667 652.8633333 0.002409061 0.017557139 0.011487856 -20 -7 -13.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 30016092 30016099 - 3R_30016092_30016099_- 0.631136606 0.631136649 0.631136628 0 Mgat2 FBtr0334705|FBtr0085602|FBtr0100418 30015511|30015511|30015511 30016371|30016371|30016371 3R - 30016063 30016117 3'utr Mgat2 FlyBase G55839.1 TCATACTATAAGTAACCCTCTAGTCACACATTCAATTGGAATCGCCGTGTTGTTG 42 30016099 0.726505363 8 37 207 0.884615385 1.185636577 0 0.19047619 0.346153846 42 4 2 46 3R:30016063-30016117 8 Mgat2 FBtr0100418|FBtr0085602|FBtr0334705 30015511|30015511|30015511 30016371|30016371|30016371 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R - 30016053 30016115 3'utr Mgat2 FlyBase G42129.1 ATACTATAAGTAACCCTCTAGTCACACATTCAATTGGAATCGCCGTGTTGTTGCAACCTCCAA 32 30016099 0.827681364 8 30 139 0.941176471 1.681241237 0 0.40625 0.62745098 32 3 0 48 3R:30016053-30016115 8 32.5 3791 FBgn0039738 328.6966667 12.42333333 18.86666667 0.098875356 2.616045076 1.722614841 0 0 0 0.1 dme-miR-304-5p 6mer2-7 GAGATT 3R 30034240 30034245 + 3R_30034240_30034245_+ 0.921858964 0.969294047 0.945576506 0.03354161 Axn FBtr0300600 30031347 30035311 3R + 30034200 30034372 stop_codon Axn FlyBase G46997.1 GACGCACTGCGAGGACCCGGACAGTCCAGTGATTCAGGAAGAGATTGTTAACGACTCCGACATACTGCCGCTATTCGGAGACAAAGCGATGGGTCTTGTCAAGCCATCCGATTAATATTAAGCATTTAGCGTAGATTTTGTATTAAGGCAAATCGTGAGTGTGGCTTGGTGCA 48 30034233 0.955991947 17 48 229 1 1.748188027 0.160714286 0.145833333 0.267857143 48 0 0 56 3R:30034200-30034372 6 Axn FBtr0300600 30031347 30035311 GAGATT 6mer2-7 dme-miR-304-5p 3R + 30034186 30034288 intron-3'utr Axn FlyBase G35462.1 AGGTTCTTCTTCAAGACGCACTGCGAGGACCCGGACAGTCCAGTGATTCAGGAAGAGATTGTTAACGACTCCGACATACTGCCGCTATTCGGAGACAAAGCGA 30 30034232 0.950631355 11 26 113 0.833333333 1.653212514 0.222222222 0.5 0.722222222 30 9 0 45 3R:30034186-30034288 6 20.5 3792 FBgn0026597 1043.036667 27.21666667 41.75333333 0.019654151 0.753214942 0.490978764 7 8 7.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 30034555 30034560 + 3R_30034555_30034560_+ 0.999905308 0.996956242 0.998430775 0.002085329 Axn FBtr0085553|FBtr0290030|FBtr0085554|FBtr0334703|FBtr0334702|FBtr0300600|FBtr0085555 30034313|30034313|30034313|30034313|30034313|30031347|30034313 30035311|30035311|30034919|30035311|30035311|30035311|30035311 3R + 30034498 30034575 3'utr Axn FlyBase G46999.1 GTAAGCATCACAAACTACTCTCTGCGGGGGCAATGTATTTTTCTGTACAACAAAAACTGATCTATTCACCAGCCACCC 59 30034562 0.60023803 10 59 259 1 1.84509804 0.085714286 0.169491525 0.3 59 0 0 70 3R:30034498-30034575 6 Axn FBtr0300600|FBtr0085555|FBtr0334702|FBtr0085554|FBtr0334703|FBtr0085553|FBtr0290030 30031347|30034313|30034313|30034313|30034313|30034313|30034313 30035311|30035311|30035311|30034919|30035311|30035311|30035311 TGATCT 6mer3-8 dme-bantam-3p 3R + 30034501 30034575 3'utr Axn FlyBase G35465.1 AGCATCACAAACTACTCTCTGCGGGGGCAATGTATTTTTCTGTACAACAAAAACTGATCTATTCACCAGCCACCC 35 30034562 0.891273105 6 35 150 1 1.72427587 0.037735849 0.371428571 0.58490566 35 0 0 53 3R:30034501-30034575 6 39.5 3793 FBgn0026597 1043.036667 27.21666667 41.75333333 0.037870193 1.451316595 0.946032253 -7 -7 -7 0.1 dme-miR-92b-3p 7mer-A1 TGCAATA 3R 30034828 30034834 + 3R_30034828_30034834_+ 0.77441925 0.759379477 0.766899364 0.010634745 Axn FBtr0085553|FBtr0290030|FBtr0085554|FBtr0334703|FBtr0334702|FBtr0300600|FBtr0085555 30034313|30034313|30034313|30034313|30034313|30031347|30034313 30035311|30035311|30034919|30035311|30035311|30035311|30035311 3R + 30034803 30034848 3'utr Axn FlyBase G47000.1 TACCTTTTACTAACTACGGACTGCCTGCAATAAATTTTGTTAATAT 51 30034828 0.906043811 6 48 260 0.983050847 1.763427994 0 0.137254902 0.254237288 51 1 0 58 3R:30034803-30034848 7 Axn FBtr0300600|FBtr0085555|FBtr0334702|FBtr0085554|FBtr0334703|FBtr0085553|FBtr0290030 30031347|30034313|30034313|30034313|30034313|30034313|30034313 30035311|30035311|30035311|30034919|30035311|30035311|30035311 TGCAATA 7mer-A1 dme-miR-92b-3p 3R + 30034783 30034845 3'utr Axn FlyBase G35466.1 CTCGATTGGGATTTGTTTGTTACCTTTTACTAACTACGGACTGCCTGCAATAAATTTTGTTAA 35 30034828 0.971899113 6 34 211 0.955555556 1.156347201 0.088888889 0.228571429 0.4 35 0 2 43 3R:30034783-30034845 7 39 3794 FBgn0026597 1043.036667 27.21666667 41.75333333 0.037390824 1.432945499 0.934057161 0 0 0 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 30042986 30042992 + 3R_30042986_30042992_+ 0.661613382 0.661615303 0.661614342 1.34E-06 Sry-alpha FBtr0085557|FBtr0346862 30042853|30042853 30043071|30043071 3R + 30042965 30042998 3'utr Sry-alpha FlyBase G47010.1 TAATTAGCTACCTAAGTCAATTGTGTTCTTTACA 22 30042985 0.801680176 2 22 228 1 1.361727836 0 0.045454545 0.086956522 22 0 0 23 3R:30042965-30042998 7 Sry-alpha FBtr0346862|FBtr0085557 30042853|30042853 30043071|30043071 TGTGTTC 7mer-m8 dme-miR-317-3p 3R + 30042965 30042997 3'utr Sry-alpha FlyBase G35473.1 TAATTAGCTACCTAAGTCAATTGTGTTCTTTAC 7 30042985 0.794980966 2 7 77 1 1.176091259 0 0.714285714 0.866666667 7 0 0 15 3R:30042965-30042997 7 14.5 3795 FBgn0003510 16.33666667 1.003333333 1.446666667 0.887573964 14.45182724 10.02304147 1 1 1 0.1 dme-miR-252-5p 6mer3-8 GTACTT 3R 30044839 30044844 + 3R_30044839_30044844_+ 0.999999568 0.999999183 0.999999375 2.83E-07 Sry-delta FBtr0085558 30044779 30044886 3R + 30044818 30044868 3'utr Sry-delta FlyBase G47019.1 CTAGTGTATTTCCTCCTCTTTGTACTTGATTATTGTAGATTCCTACAAAAT 84 30044838 0.783664992 10 84 1163 1 1.982271233 0.052083333 0.130952381 0.239583333 84 0 0 96 3R:30044818-30044868 6 Sry-delta FBtr0085558 30044779 30044886 GTACTT 6mer3-8 dme-miR-252-5p 3R + 30044802 30044859 3'utr Sry-delta FlyBase G35479.1 AATTGTTTATCTTTCCCTAGTGTATTTCCTCCTCTTTGTACTTGATTATTGTAGATTC 58 30044838 0.994172369 6 58 754 1 1.913813852 0.024390244 0.344827586 0.536585366 58 0 0 82 3R:30044802-30044859 6 70 3796 FBgn0003512 609.7433333 48.67 74.76 0.114802403 1.438257654 0.936329588 1 1 1 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3R 30048581 30048587 + 3R_30048581_30048587_+ 0.521011057 0.521196109 0.521103583 0.000130815 CG7943 FBtr0085560|FBtr0085559 30048217|30048217 30048665|30048665 3R + 30048565 30048646 3'utr CG7943 FlyBase G47026.1 TGTTCGCCAATAACTTTGTGATTGATTGAAGATACTACAACTGATTAATTAACGCGGTAGATTCAATGTTCTTAAACGAAAA 131 30048580 0.754764705 8 123 1114 0.957575758 1.596597096 0.254545455 0.213740458 0.375757576 131 4 3 158 3R:30048565-30048646 7 CG7943 FBtr0085560|FBtr0085559 30048217|30048217 30048665|30048665 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 30048565 30048607 3'utr CG7943 FlyBase G35484.1 TGTTCGCCAATAACTTTGTGATTGATTGAAGATACTACAACTG 84 30048580 0.707214988 6 81 699 0.968992248 2.096910013 0.333333333 0.345238095 0.573643411 84 4 0 125 3R:30048565-30048607 7 103 3797 FBgn0039741 255.38 18.77666667 28.61666667 0.403320542 5.485531688 3.599301107 1 1 1 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 3R 30057972 30057978 + 3R_30057972_30057978_+ 0.782910733 0.782911603 0.782911168 6.36E-07 CG7950 FBtr0085563|FBtr0085564 30057934|30057934 30058131|30058131 3R + 30057955 30057983 3'utr CG7950 FlyBase G47036.1 GAGCTAGGTGTGACTTCGTACAAAATAAA 6 30057970 0.717180945 2 6 31 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 3R:30057955-30057983 7 CG7950 FBtr0085563|FBtr0085564 30057934|30057934 30058131|30058131 GTACAAA 7mer-A1 dme-miR-305-5p 3R + 30057955 30057988 3'utr CG7950 FlyBase G35489.1 GAGCTAGGTGTGACTTCGTACAAAATAAATAAAA 17 30057970 0.712796543 4 15 99 0.913043478 1.322219295 0 0.235294118 0.434782609 17 2 0 21 3R:30057955-30057988 7 11.5 3798 FBgn0260468 214.1466667 22.56333333 34.67333333 0.053701513 0.509676466 0.331666987 2 2 2 0.1 dme-miR-34-5p 6mer2-7 ACTGCC 3R 30121077 30121082 + 3R_30121077_30121082_+ 0.999658369 0.99908548 0.999371924 0.000405101 sima FBtr0344376|FBtr0344374|FBtr0344373|FBtr0344375 30120757|30120757|30120757|30120149 30121798|30121798|30121798|30121798 3R + 30121059 30121095 3'utr sima FlyBase G47060.1 AGTTTTGTAGCCATGTTAACTGCCTAGAACAGAAGAA 19 30121083 0.956777077 5 17 115 0.904761905 1.278753601 0.19047619 0.105263158 0.19047619 19 2 0 19 3R:30121059-30121095 6 sima FBtr0344376|FBtr0344374|FBtr0344373|FBtr0344375 30120757|30120757|30120757|30120149 30121798|30121798|30121798|30121798 ACTGCC 6mer2-7 dme-miR-34-5p 3R + 30121057 30121124 3'utr sima FlyBase G35504.1 ATAGTTTTGTAGCCATGTTAACTGCCTAGAACAGAAGAATATACACGTATGTAATTTAGTCTTAATGT 17 30121083 0.976756264 6 15 106 0.956521739 1.342422681 0.391304348 0.176470588 0.391304348 17 1 0 22 3R:30121057-30121124 6 17 3799 FBgn0266411 1469.71 34.50666667 52.49333333 0.011566908 0.492658423 0.323850648 -6 -6 -6 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 30121540 30121545 + 3R_30121540_30121545_+ 0.999920554 0.999992601 0.999956577 5.09E-05 sima FBtr0344376|FBtr0344374|FBtr0344373|FBtr0344375 30120757|30120757|30120757|30120149 30121798|30121798|30121798|30121798 3R + 30121528 30121567 3'utr sima FlyBase G47062.1 ACCCGATTCAGTTGATCTAAACTTCAAATACTTTGAGCAT 21 30121539 0.979271172 3 20 145 1 1.431363764 0 0.285714286 0.444444444 21 0 0 27 3R:30121528-30121567 6 sima FBtr0344376|FBtr0344374|FBtr0344373|FBtr0344375 30120757|30120757|30120757|30120149 30121798|30121798|30121798|30121798 TGATCT 6mer3-8 dme-bantam-3p 3R + 30121528 30121555 3'utr sima FlyBase G35506.1 ACCCGATTCAGTTGATCTAAACTTCAAA 17 30121539 0.705496706 3 17 119 1 1.342422681 0 0.294117647 0.454545455 17 0 0 22 3R:30121528-30121555 6 18.5 3800 FBgn0266411 1469.71 34.50666667 52.49333333 0.012587517 0.536128284 0.352425705 1 1 1 0.1 dme-miR-12-5p 7mer-A1 ATACTCA 3R 30213387 30213393 - 3R_30213387_30213393_- 0.821375998 0.823010007 0.822193002 0.001155412 CecB FBtr0085640 30213313 30213475 3R - 30213368 30213404 3'utr CecB FlyBase G55877.1 AATGAAAATAGATACTCAATGCCAATGTCAAATTATT 8 30213385 0.946256182 4 8 34 1 1.146128036 0.071428571 0.375 0.642857143 8 0 0 14 3R:30213368-30213404 7 CecB FBtr0085640 30213313 30213475 ATACTCA 7mer-A1 dme-miR-12-5p 3R - 30213366 30213404 3'utr CecB FlyBase G42159.1 AATGAAAATAGATACTCAATGCCAATGTCAAATTATTAA 11 30213396 0.891514199 4 11 55 1 1.176091259 0 0.272727273 0.466666667 11 0 0 15 3R:30213366-30213404 7 9.5 3801 FBgn0000278 26.33333333 8.696666667 13.18 0.360759494 1.092372557 0.720789074 -8 3 -2.5 0.1 dme-miR-8-3p 8mer-A1 CAGTATTA 3R 30361140 30361147 + 3R_30361140_30361147_+ 0.667027848 0.511239499 0.589133674 0.110158963 hdc FBtr0085619|FBtr0085620|FBtr0330311 30360539|30360539|30360539 30362093|30362093|30372382 3R + 30361107 30361179 3'utr hdc FlyBase G47081.1 AAGCAACAACAATAGCAGCAGCAGCAGCAGCAGCAGTATTAGTAACTTAATCATTAGCCATAATTCAGCCAGC 8 30361153 0.973526592 4 7 47 0.875 0.84509804 0 0 0 8 1 0 7 3R:30361107-30361179 8 hdc FBtr0085620|FBtr0330311|FBtr0085619 30360539|30360539|30360539 30362093|30372382|30362093 CAGTATTA 8mer-A1 dme-miR-8-3p 3R + 30361123 30361157 3'utr hdc FlyBase G35515.1 AGCAGCAGCAGCAGCAGCAGTATTAGTAACTTAAT 6 30361149 0.972962166 2 5 25 0.888888889 0.903089987 0 0.166666667 0.444444444 6 1 0 8 3R:30361123-30361157 8 6.5 3802 FBgn0010113 3260.306667 58.23333333 89.73 0.001993677 0.11161992 0.072439541 -13 -9 -11 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 30361605 30361610 + 3R_30361605_30361610_+ 0.999661482 0.998995061 0.999328271 0.000471216 hdc FBtr0085619|FBtr0085620|FBtr0330311 30360539|30360539|30360539 30362093|30362093|30372382 3R + 30361569 30361616 3'utr hdc FlyBase G47086.1 ACCGGCCAGCAGCCACGACATCTTCACCGATCTCCTGTGCAACCTGAG 323 30361604 0.975646975 7 308 1952 0.948529412 1.888740961 0.529411765 0.207430341 0.37254902 323 17 4 387 3R:30361569-30361616 6 hdc FBtr0085620|FBtr0330311|FBtr0085619 30360539|30360539|30360539 30362093|30372382|30362093 GTGCAA 6mer3-8 dme-miR-92b-3p 3R + 30361570 30361616 3'utr hdc FlyBase G35519.1 CCGGCCAGCAGCCACGACATCTTCACCGATCTCCTGTGCAACCTGAG 223 30361604 0.974356711 6 217 1342 0.974576271 2.06069784 0.587570621 0.385650224 0.61299435 223 7 2 345 3R:30361570-30361616 6 270.5 3803 FBgn0010113 3260.306667 58.23333333 89.73 0.082967655 4.645105896 3.014599354 1 1 1 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG 3R 30362338 30362343 + 3R_30362338_30362343_+ 0.999980167 0.996498887 0.998239527 0.002461651 hdc FBtr0330311 30360539 30372382 3R + 30362321 30362409 3'utr hdc FlyBase G47092.1 AACAAATCATGATAATTGCTGTGCTGCTCAATAACACAAAAAATCATTAAAATAAAAGGAGAAGGAGTAGAGTAGGAGAGTAAAACAGG 22 30362337 0.973597643 10 19 105 0.88 1.041392685 0.12 0.136363636 0.24 22 2 1 22 3R:30362321-30362409 6 hdc FBtr0330311 30360539 30372382 GCTGTG 6mer2-7 dme-miR-1008-3p 3R + 30362254 30362379 3'utr hdc FlyBase G35523.1 ATTTACATCACGATTGAGGGAAAAGTTTTATTTAGCAAAAATTGAAGGCAGGGCATTAAATTGTTTAAACAAATCATGATAATTGCTGTGCTGCTCAATAACACAAAAAATCATTAAAATAAAAGG 24 30362336 0.974045984 11 21 134 0.911764706 1.491361694 0.088235294 0.375 0.558823529 24 3 0 31 3R:30362254-30362379 6 11 3804 FBgn0010113 3260.306667 58.23333333 89.73 0.003373916 0.188895249 0.122589992 1 2 1.5 0.1 dme-bantam-3p 6mer2-7 GATCTC 3R 30362933 30362938 + 3R_30362933_30362938_+ 0.963428503 0.861248913 0.912338708 0.072251888 hdc FBtr0330311 30360539 30372382 3R + 30362847 30362998 3'utr hdc FlyBase G47095.1 AGTCTAAGTGTTAGGTTATAGCGATCTTCTTGTATATGTCTAGGGTTCTTCTCTTTGTCTAAATAGCAGAGCAGCCGTATGTGATGGATCTCTAAAGGTAGAGTGAGGACCCCGCAGGTGCGAGCAAACCACATGCAGGCACTCACTATCGA 375 30362939 0.939350247 27 334 2464 0.913242009 1.488116639 0.351598174 0.149333333 0.271689498 375 26 12 400 3R:30362847-30362998 6 hdc FBtr0330311 30360539 30372382 GATCTC 6mer2-7 dme-bantam-3p 3R + 30362842 30362994 3'utr hdc FlyBase G35525.1 TATTAAGTCTAAGTGTTAGGTTATAGCGATCTTCTTGTATATGTCTAGGGTTCTTCTCTTTGTCTAAATAGCAGAGCAGCCGTATGTGATGGATCTCTAAAGGTAGAGTGAGGACCCCGCAGGTGCGAGCAAACCACATGCAGGCACTCACTA 297 30362939 0.794945248 26 269 2013 0.907756813 1.335457901 0.381551363 0.420875421 0.639412998 297 25 19 433 3R:30362842-30362994 6 224.5 3805 FBgn0010113 3260.306667 58.23333333 89.73 0.068858553 3.855180309 2.501950295 -6 -6 -6 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 3R 30363101 30363106 + 3R_30363101_30363106_+ 0.891243674 0.993400455 0.942322065 0.072235766 hdc FBtr0330311 30360539 30372382 3R + 30363070 30363160 3'utr hdc FlyBase G47096.2 AATTTATAGAGCGGTTCAATGTTTCCTGTTTTGTGTTTATTCCGTGCTTAGAAAAGTCACCAAAATCCTGGGGTATAAGTCCTTCCCAATC 83 30363089 0.85513454 14 79 786 0.95 1.977723605 0.09 0.180722892 0.32 83 5 0 95 3R:30363070-30363160 6 hdc FBtr0330311 30360539 30372382 TGTGTT 6mer3-8 dme-miR-317-3p 3R + 30363068 30363166 3'utr hdc FlyBase G35527.1 ACAATTTATAGAGCGGTTCAATGTTTCCTGTTTTGTGTTTATTCCGTGCTTAGAAAAGTCACCAAAATCCTGGGGTATAAGTCCTTCCCAATCTCTCAG 58 30363089 0.847118283 14 51 577 0.895348837 1.108339475 0.104651163 0.275862069 0.511627907 58 4 5 77 3R:30363068-30363166 6 39 3806 FBgn0010113 3260.306667 58.23333333 89.73 0.011962065 0.669719519 0.434637245 12 12 12 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 30363285 30363290 + 3R_30363285_30363290_+ 1.000000002 0.999999758 0.99999988 1.41E-07 hdc FBtr0330311|FBtr0330311|FBtr0330311 30360539|30360539|30360539 30372382|30372382|30372382 3R + 30363269 30363300 3'utr hdc FlyBase G47097.1 AAAATAACTTTCCCGTCTGTGAAATTTTTAAT 10 30363283 0.635331799 7 9 88 0.818181818 0.954242509 0.090909091 0.1 0.181818182 10 2 0 9 3R:30363269-30363300 6 hdc FBtr0330311|FBtr0330311|FBtr0330311 30360539|30360539|30360539 30372382|30372382|30372382 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 30363273 30363294 3'utr hdc FlyBase G35528.1 TAACTTTCCCGTCTGTGAAATT 5 30363284 0.744774703 2 5 37 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:30363273-30363294 6 7 3807 FBgn0010113 3260.306667 58.23333333 89.73 0.002147037 0.120206068 0.078011813 2 1 1.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 30364315 30364320 + 3R_30364315_30364320_+ 1.000000002 0.999998581 0.999999291 9.90E-07 hdc FBtr0330311|FBtr0330311|FBtr0330311 30360539|30360539|30360539 30372382|30372382|30372382 3R + 30364296 30364336 3'utr hdc FlyBase G47104.1 GAAAAACCTCCTCGAATAACTGTGAAATCCCCTTCCTTAGA 78 30364323 0.788175108 6 70 525 0.898876404 1.903089987 0.02247191 0.102564103 0.213483146 78 9 0 80 3R:30364296-30364336 6 hdc FBtr0330311|FBtr0330311|FBtr0330311 30360539|30360539|30360539 30372382|30372382|30372382 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 30364294 30364333 3'utr hdc FlyBase G35534.1 TTGAAAAACCTCCTCGAATAACTGTGAAATCCCCTTCCTT 38 30364323 0.827664009 5 35 241 0.947368421 1.431363764 0 0.368421053 0.578947368 38 2 1 54 3R:30364294-30364333 6 58 3808 FBgn0010113 3260.306667 58.23333333 89.73 0.017789738 0.995993131 0.646383595 -8 -8 -8 0.1 dme-miR-277-3p 7mer-A1 GCATTTA 3R 30364756 30364762 + 3R_30364756_30364762_+ 0.823349565 0.823349565 0.823349565 0 hdc FBtr0330311 30360539 30372382 3R + 30364673 30364803 3'utr hdc FlyBase G47106.1 AAGTACATACCCTATACCATATACCCTATACCGTATAAAACGTACACCTAACTAACCTAAATTGATAGAAACTACACTTTTTGGCATTTACTTGAGAGGATTATATATAAGTTTGGCACAGTTATATATAA 68 30364759 0.976689973 16 59 624 0.85 1.531478917 0.2875 0.132352941 0.2625 68 11 1 68 3R:30364673-30364803 7 hdc FBtr0330311 30360539 30372382 GCATTTA 7mer-A1 dme-miR-277-3p 3R + 30364705 30364785 3'utr hdc FlyBase G35537.1 GTATAAAACGTACACCTAACTAACCTAAATTGATAGAAACTACACTTTTTGGCATTTACTTGAGAGGATTATATATAAGTT 30 30364760 0.994444207 11 20 263 0.708333333 1.054357662 0.291666667 0.566666667 0.729166667 30 12 2 34 3R:30364705-30364785 7 34.5 3809 FBgn0010113 3260.306667 58.23333333 89.73 0.010581827 0.59244419 0.384486794 -3 -4 -3.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 30365656 30365661 + 3R_30365656_30365661_+ 1.000000004 0.999999937 0.999999971 7.07E-08 hdc FBtr0330311 30360539 30372382 3R + 30365639 30365687 3'utr hdc FlyBase G47111.1 CCTTTTGAATCTTTTCGTGATCTTCAGTTACTGAAACATGCCAAAATCC 10 30365652 0.84015546 6 9 79 0.909090909 0.698970004 0.090909091 0.1 0.181818182 10 0 1 10 3R:30365639-30365687 6 hdc FBtr0330311 30360539 30372382 TGATCT 6mer3-8 dme-bantam-3p 3R + 30365599 30365687 3'utr hdc FlyBase G35542.1 ATATTTTATGTTCAACAAATGAAATATTTGCGCGCCTTTCCCTTTTGAATCTTTTCGTGATCTTCAGTTACTGAAACATGCCAAAATCC 12 30365655 0.990645419 8 12 112 1 1.204119983 0.0625 0.333333333 0.5 12 0 0 16 3R:30365599-30365687 6 8 3810 FBgn0010113 3260.306667 58.23333333 89.73 0.002453757 0.137378363 0.089156358 4 1 2.5 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 3R 30365802 30365808 + 3R_30365802_30365808_+ 0.771443905 0.76515319 0.768298547 0.004448197 hdc FBtr0330311 30360539 30372382 3R + 30365779 30365856 3'utr hdc FlyBase G47113.1 CTCAGATCATCTGATGACGAAATGTACAAATTGGTGAAGTTTAGGCACTTTCAACCGCAGTCCTCATCCGAATTCCCA 22 30365809 0.85876262 8 21 149 0.961538462 1.397940009 0.346153846 0.136363636 0.269230769 22 1 0 25 3R:30365779-30365856 7 hdc FBtr0330311 30360539 30372382 GTACAAA 7mer-A1 dme-miR-305-5p 3R + 30365777 30365817 3'utr hdc FlyBase G35543.1 TTCTCAGATCATCTGATGACGAAATGTACAAATTGGTGAAG 17 30365810 0.715907938 6 15 125 0.904761905 1.278753601 0.714285714 0.235294118 0.380952381 17 2 0 19 3R:30365777-30365817 7 17.5 3811 FBgn0010113 3260.306667 58.23333333 89.73 0.005367593 0.300515169 0.195029533 -7 -8 -7.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 30366074 30366079 + 3R_30366074_30366079_+ 0.999999103 0.999999933 0.999999518 5.66E-07 hdc FBtr0330311 30360539 30372382 3R + 30366051 30366103 3'utr hdc FlyBase G47114.1 AATGTGTAATATATGTATACTTTGTACCTTTTTATGTTATACACAAGTCCCCA 79 30366081 0.903100435 10 75 978 0.970588235 1.995635195 0.098039216 0.227848101 0.401960784 79 3 0 99 3R:30366051-30366103 6 hdc FBtr0330311 30360539 30372382 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 30366045 30366095 3'utr hdc FlyBase G35544.1 ATTCGTAATGTGTAATATATGTATACTTTGTACCTTTTTATGTTATACACA 65 30366081 0.827728355 9 65 833 1 1.954242509 0.233333333 0.307692308 0.5 65 0 0 90 3R:30366045-30366095 6 71.5 3812 FBgn0010113 3260.306667 58.23333333 89.73 0.021930452 1.227819118 0.796834949 -7 -7 -7 0.1 dme-miR-283-5p 8mer-m1 TGATATTT 3R 30368998 30369005 + 3R_30368998_30369005_+ 0.469558099 0.407219303 0.438388701 0.044080188 hdc FBtr0330311 30360539 30372382 3R + 30368980 30369017 3'utr hdc FlyBase G47119.1 AAAGAGCTCCCCGATATGTGATATTTAATTGGTAATTG 14 30368994 0.800616335 4 14 110 1 1.230448921 0.058823529 0.214285714 0.352941176 14 0 0 17 3R:30368980-30369017 8 hdc FBtr0330311 30360539 30372382 TGATATTT 8mer-m1 dme-miR-283-5p 3R + 30368982 30369005 3'utr hdc FlyBase G35546.1 AGAGCTCCCCGATATGTGATATTT 5 30368994 0.81224685 2 5 35 1 0.84509804 0 0.4 0.571428571 5 0 0 7 3R:30368982-30369005 8 9.5 3813 FBgn0010113 3260.306667 58.23333333 89.73 0.002913836 0.163136806 0.105873175 4 4 4 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3R 30385761 30385767 - 3R_30385761_30385767_- 0.521222994 0.521222489 0.521222741 3.54E-07 Fer1HCH FBtr0085635 30385571 30386297 3R - 30385639 30385793 3'utr Fer1HCH FlyBase G55884.2 ACGTCTGTTCTTTCTTATCAACCACTTGTGATTTCCGTACACCTCGGGAGGGGGCTCCACATTATGCAATCGCCGAGATTTCGCCTAGGCTTAAGTGGAATCGCTCATTCGCATAGTAAGACACTCAGCACAACCCATTCAATACATCCTATATC 411 30385761 0.830147327 27 377 2895 0.915662651 1.579783597 0.06626506 0.175182482 0.319277108 411 31 11 456 3R:30385639-30385793 7 Fer1HCH FBtr0085631|FBtr0085634|FBtr0306588|FBtr0085635|FBtr0085633|FBtr0085632 30385571|30385571|30385571|30385571|30385571|30385571 30385983|30385983|30385983|30386297|30385983|30385983 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 30385655 30385863 NoAnnotation G42166.1 AGCCAAGTCGGCGACTGGCCAATAAATTATCCGTTCGACTGCGATCCTCAAACCAGCACAGCAAAATTCCACGTCTGTTCTTTCTTATCAACCACTTGTGATTTCCGTACACCTCGGGAGGGGGCTCCACATTATGCAATCGCCGAGATTTCGCCTAGGCTTAAGTGGAATCGCTCATTCGCATAGTAAGACACTCAGCACAACCCATT 289 30385761 0.969122581 39 278 1979 0.968609865 2.334453751 0.047085202 0.401384083 0.612107623 289 13 1 432 3R:30385655-30385863 7 223.5 3814 FBgn0015222 3048.623333 308.1333333 465.1 0.073311779 0.725335353 0.480541819 -6 -6 -6 0.1 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 3R 30386109 30386115 - 3R_30386109_30386115_- 0.823349562 0.823349562 0.823349562 0 Fer1HCH FBtr0085635 30385571 30386297 3R - 30386085 30386144 5'utr Fer1HCH FlyBase G55885.1 AGCCCTACAACCACTACCACCTGGTGGACTACCTGACCGGTGTCTATCTGGAGGAGCAGC 16 30386121 0.958667426 6 15 75 0.947368421 1.255272505 0 0.1875 0.315789474 16 1 0 18 3R:30386085-30386144 7 Fer1HCH FBtr0085635 30385571 30386297 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R - 30386073 30386148 5'utr Fer1HCH FlyBase G42167.1 AACAAGCCCTACAACCACTACCACCTGGTGGACTACCTGACCGGTGTCTATCTGGAGGAGCAGCTCCACGGACAGC 10 30386119 0.934152345 6 8 41 0.789473684 1.176091259 0 0.4 0.684210526 10 4 0 15 3R:30386073-30386148 7 11 3815 FBgn0015222 3048.623333 308.1333333 465.1 0.003608186 0.035698832 0.023650828 6 4 5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3R 30419200 30419206 - 3R_30419200_30419206_- 0.661564869 0.661588334 0.661576602 1.65E-05 CG2217 FBtr0344524|FBtr0085630|FBtr0303200 30418765|30418765|30418765 30421490|30421490|30421490 3R - 30419188 30419218 5'utr CG2217 FlyBase G55894.1 ATTCTGCTGGCTTCTAGTCGCCGTTCTACTC 22 30419207 0.750455744 4 22 158 1 1.397940009 0.32 0.090909091 0.2 22 0 0 25 3R:30419188-30419218 7 CG2217 FBtr0085630|FBtr0303200|FBtr0344524 30418765|30418765|30418765 30421490|30421490|30421490 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3R - 30419186 30419218 5'utr CG2217 FlyBase G42172.1 ATTCTGCTGGCTTCTAGTCGCCGTTCTACTCTT 9 30419207 0.74128238 3 9 67 1 1.176091259 0.066666667 0.444444444 0.666666667 9 0 0 15 3R:30419186-30419218 7 15.5 3816 FBgn0027544 12.99 0.683333333 1.056666667 1.193225558 22.68292683 14.66876972 1 1 1 0.1 dme-miR-8-3p 6mer3-8 CAGTAT 3R 30425827 30425832 - 3R_30425827_30425832_- 0.999903648 0.999997903 0.999950776 6.67E-05 CG2218 FBtr0085627|FBtr0339142 30425425|30425658 30426058|30426058 3R - 30425775 30425898 3'utr CG2218 FlyBase G55899.1 ATCGCAAAATCGCAGTTAAGCCAAATGTGTACACGCGCGAGTCCCTCCCGATTCGGCAGTATGTATCAGTATCAGGTCACGTTTAGTCATAGAGCAGATTACGGATTACCGATTAGCAATAGAG 56 30425833 0.854415691 15 54 354 0.969230769 1.498310554 0.153846154 0.107142857 0.230769231 56 1 1 63 3R:30425775-30425898 6 CG2218 FBtr0085627|FBtr0339142 30425425|30425658 30426058|30426058 CAGTAT 6mer3-8 dme-miR-8-3p 3R - 30425764 30425863 3'utr CG2218 FlyBase G42177.1 CGCGAGTCCCTCCCGATTCGGCAGTATGTATCAGTATCAGGTCACGTTTAGTCATAGAGCAGATTACGGATTACCGATTAGCAATAGAGAGTGCGCGCCT 28 30425833 0.981157855 8 23 172 0.833333333 1.544068044 0.166666667 0.392857143 0.595238095 28 7 0 35 3R:30425764-30425863 6 24 3817 FBgn0039767 282 15.08666667 22.94 0.085106383 1.590808661 1.046207498 1 1 1 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3R 30456795 30456801 - 3R_30456795_30456801_- 0.443131014 0.443131017 0.443131016 0 CG2224 FBtr0331358 30456439 30457058 3R - 30456787 30456852 3'utr CG2224 FlyBase G55921.1 TTGCGTTCCGGCCTCTTGGTTCGTTGCATTCTTTCACTTAAGAACCTCTAATGTGATTTTCAATTG 37 30456795 0.826107322 10 37 283 1 1.73239376 0.111111111 0.378378378 0.574074074 37 0 0 54 3R:30456787-30456852 7 CG2224 FBtr0331358 30456439 30457058 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 30456765 30456857 3'utr CG2224 FlyBase G42194.1 GTTTATTGCGTTCCGGCCTCTTGGTTCGTTGCATTCTTTCACTTAAGAACCTCTAATGTGATTTTCAATTGTGGCTTACCCTTGCGTTCGTTA 31 30456795 0.98484663 13 29 239 0.875 1.243038049 0.15 0.225806452 0.4 31 4 1 35 3R:30456765-30456857 7 28.5 3818 FBgn0039773 322.3166667 18.33333333 28.13666667 0.088422359 1.554545455 1.012913162 -6 -6 -6 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 30786718 30786725 + 3R_30786718_30786725_+ 0.500112244 0.500109672 0.500110958 1.77E-06 zfh1 FBtr0331180|FBtr0085701|FBtr0085702 30786658|30786202|30786202 30789202|30789202|30787177 3R + 30786690 30786765 3'utr zfh1 FlyBase G47224.1 AAGCCAGCCAAGCCAGCACTTACAGGCTGTACTTAAAAACCGACGAACAGAAAATCTCAAAATGTGCAGGAACACA 200 30786717 0.947028463 9 188 797 0.950207469 1.882714228 0.290456432 0.165 0.307053942 200 10 2 229 3R:30786690-30786765 8 zfh1 FBtr0331180|FBtr0085701|FBtr0085702 30786658|30786202|30786202 30789202|30789202|30787177 GTACTTAA 8mer-A1 dme-miR-252-5p 3R + 30786691 30786753 3'utr zfh1 FlyBase G35627.1 AGCCAGCCAAGCCAGCACTTACAGGCTGTACTTAAAAACCGACGAACAGAAAATCTCAAAATG 96 30786717 0.943372587 6 93 382 0.98540146 2.130333768 0.248175182 0.302083333 0.510948905 96 2 0 135 3R:30786691-30786753 8 137.5 3819 FBgn0004606 2785.276667 51.94333333 79.77333333 0.04936673 2.647115446 1.723633629 1 1 1 0.1 dme-miR-8-3p 6mer2-7 AGTATT 3R 30786939 30786944 + 3R_30786939_30786944_+ 0.999999547 0.999999986 0.999999767 3.54E-07 zfh1 FBtr0331180|FBtr0085701|FBtr0085702 30786658|30786202|30786202 30789202|30789202|30787177 3R + 30786835 30787005 3'utr zfh1 FlyBase G47226.1 TTTTTTATAGCCATATAGACAGGGGAAATGTAAGAAGCCGTAGTTGAAAACCTTTCGTTTGAGCGAATTTATTATTTTTACAATGTTGCAACCACTTTGTTCTTAGTATTTTATTAGTTTAGCTTAACTTAGCTTACCGCCTAAGTTCGAGCGCAGGGCTGAATCATTTTG 139 30786937 0.929754304 33 134 1188 0.964497041 1.911157609 0.272189349 0.18705036 0.331360947 139 5 1 163 3R:30786835-30787005 6 zfh1 FBtr0331180|FBtr0085701|FBtr0085702 30786658|30786202|30786202 30789202|30789202|30787177 AGTATT 6mer2-7 dme-miR-8-3p 3R + 30786834 30787013 3'utr zfh1 FlyBase G35628.1 ATTTTTTATAGCCATATAGACAGGGGAAATGTAAGAAGCCGTAGTTGAAAACCTTTCGTTTGAGCGAATTTATTATTTTTACAATGTTGCAACCACTTTGTTCTTAGTATTTTATTAGTTTAGCTTAACTTAGCTTACCGCCTAAGTTCGAGCGCAGGGCTGAATCATTTTGTTTGGCCC 97 30786937 0.989411513 27 87 860 0.919708029 1.401400541 0.328467153 0.288659794 0.496350365 97 7 4 126 3R:30786834-30787013 6 61.5 3820 FBgn0004606 2785.276667 51.94333333 79.77333333 0.022080392 1.183982545 0.770934314 2 2 2 0.1 dme-miR-932-5p 6mer3-8 GGAATT 3R 30787259 30787264 + 3R_30787259_30787264_+ 0.591673683 0.58709997 0.589386826 0.003234094 zfh1 FBtr0331180|FBtr0085701 30786658|30786202 30789202|30789202 3R + 30787211 30787292 3'utr zfh1 FlyBase G47228.1 AGTTTTCGGTTAAGCCAGGCTGGGTTGACATTGCACAACCGCTCGAAAGGAATTTTCCACCCACAACCTCCGGACCAACACA 54 30787279 0.920887867 9 49 202 0.953125 1.484299839 0.203125 0.148148148 0.28125 54 2 1 61 3R:30787211-30787292 6 zfh1 FBtr0331180|FBtr0085701 30786658|30786202 30789202|30789202 GGAATT 6mer3-8 dme-miR-932-5p 3R + 30787216 30787291 3'utr zfh1 FlyBase G35630.1 TCGGTTAAGCCAGGCTGGGTTGACATTGCACAACCGCTCGAAAGGAATTTTCCACCCACAACCTCCGGACCAACAC 37 30787279 0.914897995 7 35 124 0.918032787 1.271066772 0.081967213 0.459459459 0.672131148 37 3 2 56 3R:30787216-30787291 6 17.5 3821 FBgn0004606 2785.276667 51.94333333 79.77333333 0.006283038 0.336905602 0.219371553 -20 -20 -20 0.1 dme-miR-965-3p 7mer-m8 TACGCTT 3R 30787553 30787559 + 3R_30787553_30787559_+ 0.620166701 0.620204847 0.620185774 2.69E-05 zfh1 FBtr0331180|FBtr0085701 30786658|30786202 30789202|30789202 3R + 30787527 30787647 3'utr zfh1 FlyBase G47231.1 AAGGAAAACCCCAGTCGTTCGCGAACTACGCTTTAAATTTAAACTTCTTCCCCACTAAGTCGCGAAATGAGCACAAAACACCTACAAGATCATTCCAATTTGGCCAGAGCCGCCGCGCCCC 79 30787559 0.982949211 14 76 360 0.969387755 1.977723605 0.040816327 0.164556962 0.326530612 79 3 0 95 3R:30787527-30787647 7 zfh1 FBtr0331180|FBtr0085701 30786658|30786202 30789202|30789202 TACGCTT 7mer-m8 dme-miR-965-3p 3R + 30787527 30787572 3'utr zfh1 FlyBase G35632.2 AAGGAAAACCCCAGTCGTTCGCGAACTACGCTTTAAATTTAAACTT 38 30787554 0.747952944 6 35 233 0.964912281 1.740362689 0.035087719 0.315789474 0.543859649 38 2 0 55 3R:30787527-30787572 7 35.5 3822 FBgn0004606 2785.276667 51.94333333 79.77333333 0.012745592 0.683437079 0.445010864 -6 -1 -3.5 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3R 30788299 30788305 + 3R_30788299_30788305_+ 0.585191252 0.657450432 0.621320842 0.0510949 zfh1 FBtr0331180|FBtr0331180|FBtr0085701|FBtr0085701 30786658|30786658|30786202|30786202 30789202|30789202|30789202|30789202 3R + 30788263 30788373 3'utr zfh1 FlyBase G47237.1 CGAGAGGAAGAAAAACTCACAAAAAAATGCATTTAATACTTAATTAGTTTTTATATTCTTGTATTTTAACGAGGAGGAGGCCGATCGGCGGCGATATATATATATATATAT 61 30788295 0.985373517 15 50 420 0.847222222 1.484299839 0.125 0.163934426 0.291666667 61 10 1 61 3R:30788263-30788373 7 zfh1 FBtr0331180|FBtr0331180|FBtr0085701|FBtr0085701 30786658|30786658|30786202|30786202 30789202|30789202|30789202|30789202 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3R + 30788272 30788346 3'utr zfh1 FlyBase G35635.1 GAAAAACTCACAAAAAAATGCATTTAATACTTAATTAGTTTTTATATTCTTGTATTTTAACGAGGAGGAGGCCGA 20 30788293 0.985168379 9 17 134 0.954545455 1.322219295 0 0.157894737 0.272727273 19 1 0 21 3R:30788272-30788346 7 21 3823 FBgn0004606 2785.276667 51.94333333 79.77333333 0.007539646 0.404286723 0.263245863 4 6 5 0.1 dme-miR-283-5p 7mer-m1 GATATTT 3R 30788675 30788681 + 3R_30788675_30788681_+ 0.754870796 0.765553108 0.760211952 0.007553527 zfh1 FBtr0331180|FBtr0085701 30786658|30786202 30789202|30789202 3R + 30788583 30788700 3'utr zfh1 FlyBase G47240.1 AAAAAAAAAAACCCTTAACAACAACAAAATGTTAACTTAAACACTAAAAGAAGAACTTATTTTTAAGCGCAAATACTATGTGGTTTGTGATGGATATTTGCACTCTAGGGCCTTATAT 16 30788679 0.988876104 13 15 123 0.941176471 0.903089987 0.176470588 0.0625 0.117647059 16 0 1 16 3R:30788583-30788700 7 zfh1 FBtr0331180|FBtr0085701 30786658|30786202 30789202|30789202 GATATTT 7mer-m1 dme-miR-283-5p 3R + 30788648 30788712 3'utr zfh1 FlyBase G35638.1 AGCGCAAATACTATGTGGTTTGTGATGGATATTTGCACTCTAGGGCCTTATATGAAATACACACT 6 30788681 0.984989414 5 6 42 1 1.041392685 0.181818182 0.666666667 0.818181818 6 0 0 11 3R:30788648-30788712 7 7 3824 FBgn0004606 2785.276667 51.94333333 79.77333333 0.002513215 0.134762241 0.087748621 -4 -6 -5 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 3R 30790164 30790169 - 3R_30790164_30790169_- 1 0.999999999 1 0 wts FBtr0085720 30789623 30790974 3R - 30790118 30790192 3'utr wts FlyBase G55945.1 AAGAACAAACTTAGACGTAGCCTATGTGAAAAGCTAGCAATGTTAGACCAACTTGTTGAATGCCAAATGAAATTG 14 30790140 0.899057861 7 13 82 0.956521739 1.342422681 0.304347826 0.285714286 0.565217391 14 1 0 22 3R:30790118-30790192 6 wts FBtr0085720 30789623 30790974 ATGTGA 6mer3-8 dme-miR-1003-3p 3R - 30790117 30790192 3'utr wts FlyBase G42206.1 AAGAACAAACTTAGACGTAGCCTATGTGAAAAGCTAGCAATGTTAGACCAACTTGTTGAATGCCAAATGAAATTGT 14 30790168 0.919738153 7 14 63 1 1.301029996 0.2 0.357142857 0.55 14 0 0 20 3R:30790117-30790192 6 6 3825 FBgn0011739 1493.683333 31.27666667 48.31 0.004016916 0.1918363 0.124197889 -29 -1 -15 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 30826212 30826217 + 3R_30826212_30826217_+ 0.999943588 0.999863068 0.999903328 5.69E-05 cindr FBtr0085706|FBtr0310068|FBtr0310072|FBtr0310070|FBtr0310071|FBtr0310424|FBtr0310069|FBtr0085705|FBtr0085704 30826044|30826044|30826044|30826044|30826044|30826044|30826044|30826044|30826044 30826550|30826559|30826550|30826550|30826550|30827005|30826550|30826550|30826559 3R + 30826128 30826239 3'utr cindr FlyBase G47268.1 AAGCGTAGAACGTAGTAGAGTAGAGACCGAACCCAAGACAATCCCAAATATCTGTACTCTGTGTTCTGTACTTATATACCAGAATGATCTATCCAAAACCACTAGCGATCAA 180 30826212 0.883386975 16 173 1111 0.965065502 2.043362278 0.056768559 0.244444444 0.406113537 180 7 1 221 3R:30826128-30826239 6 cindr FBtr0085704|FBtr0085705|FBtr0310069|FBtr0310424|FBtr0310071|FBtr0310070|FBtr0310072|FBtr0310068|FBtr0085706 30826044|30826044|30826044|30826044|30826044|30826044|30826044|30826044|30826044 30826559|30826550|30826550|30827005|30826550|30826550|30826550|30826559|30826550 TGATCT 6mer3-8 dme-bantam-3p 3R + 30826155 30826238 3'utr cindr FlyBase G35653.1 CGAACCCAAGACAATCCCAAATATCTGTACTCTGTGTTCTGTACTTATATACCAGAATGATCTATCCAAAACCACTAGCGATCA 105 30826212 0.968463506 11 102 603 0.967948718 2.178976947 0.038461538 0.352380952 0.564102564 105 5 0 151 3R:30826155-30826238 6 111.5 3826 FBgn0027598 4081.116667 128.2133333 195.6533333 0.027320954 0.869644343 0.569885512 0 0 0 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3R 30826358 30826364 + 3R_30826358_30826364_+ 0.501572744 0.51624102 0.508906882 0.010372054 cindr FBtr0085706|FBtr0310068|FBtr0310072|FBtr0310070|FBtr0310071|FBtr0310424|FBtr0310069|FBtr0085705|FBtr0085704 30826044|30826044|30826044|30826044|30826044|30826044|30826044|30826044|30826044 30826550|30826559|30826550|30826550|30826550|30827005|30826550|30826550|30826559 3R + 30826268 30826378 3'utr cindr FlyBase G47269.1 TTTTCGCTACAATACTTTGTATTCCCCTGTATATCTGATAATTTCGATAAGTATTTTTTATACACTCGTACATTCCGAAGAGCAAAAGGGTGTGATTTCTTTTAGCTGCTT 75 30826364 0.801500721 16 71 585 0.956521739 1.467361417 0.152173913 0.213333333 0.358695652 75 2 2 88 3R:30826268-30826378 7 cindr FBtr0085704|FBtr0085705|FBtr0310069|FBtr0310424|FBtr0310071|FBtr0310070|FBtr0310072|FBtr0310068|FBtr0085706 30826044|30826044|30826044|30826044|30826044|30826044|30826044|30826044|30826044 30826559|30826550|30826550|30827005|30826550|30826550|30826550|30826559|30826550 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 30826328 30826395 3'utr cindr FlyBase G35655.1 TACACTCGTACATTCCGAAGAGCAAAAGGGTGTGATTTCTTTTAGCTGCTTTCGATTGCGATTTGTTT 25 30826364 0.967044974 6 25 176 1 1.544068044 0.114285714 0.24 0.457142857 25 0 0 35 3R:30826328-30826395 7 31 3827 FBgn0027598 4081.116667 128.2133333 195.6533333 0.00759596 0.241784526 0.158443506 -6 -6 -6 0.1 dme-miR-283-5p 8mer-m1 TGATATTT 3R 31054978 31054985 - 3R_31054978_31054985_- 0.550034504 0.552073703 0.551054104 0.001441932 dco FBtr0334548 31054083 31056528 3R - 31054975 31055010 3'utr dco FlyBase G55989.1 AAAACTTAAATAAAAGTACATTACGTGATATTTCTT 9 31054990 0.983442932 4 9 74 1 1.079181246 0 0.333333333 0.5 9 0 0 12 3R:31054975-31055010 8 dco FBtr0334548 31054083 31056528 TGATATTT 8mer-m1 dme-miR-283-5p 3R - 31054972 31055003 3'utr dco FlyBase G42251.1 AAATAAAAGTACATTACGTGATATTTCTTACA 16 31054990 0.775267441 5 15 127 0.956521739 1.041392685 0.043478261 0.4375 0.608695652 16 0 1 22 3R:31054972-31055003 8 12.5 3828 FBgn0002413 1939.763333 65.62333333 100.4966667 0.006444085 0.190481028 0.124382235 5 5 5 0.1 dme-miR-277-3p 6mer3-8 TGCATT 3R 31055331 31055336 - 3R_31055331_31055336_- 0.999980071 1 0.999990035 1.41E-05 dco FBtr0085743|FBtr0085742|FBtr0085744|FBtr0334548 31055184|31055184|31055184|31054083 31056528|31056528|31056528|31056528 3R - 31055321 31055371 3'utr dco FlyBase G55991.1 ATATAAATTGCGTTAGACATACACAACAAAACAATTGCATTAACGTTTCGA 7 31055337 0.863259506 4 7 39 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 3R:31055321-31055371 6 dco FBtr0085744|FBtr0334548|FBtr0085743|FBtr0085742 31055184|31054083|31055184|31055184 31056528|31056528|31056528|31056528 TGCATT 6mer3-8 dme-miR-277-3p 3R - 31055280 31055364 3'utr dco FlyBase G42252.1 TTGCGTTAGACATACACAACAAAACAATTGCATTAACGTTTCGATTTAACAATGTAAGTAATGGCCCTGCGGAGGAAAGTTACAC 10 31055336 0.945193932 7 10 48 1 1.146128036 0.214285714 0.3 0.5 10 0 0 14 3R:31055280-31055364 6 4 3829 FBgn0002413 1939.763333 65.62333333 100.4966667 0.002062107 0.060953929 0.039802315 1 0 0.5 0.1 dme-miR-317-3p 8mer-A1 TGTGTTCA 3R 31055508 31055515 - 3R_31055508_31055515_- 0.631136783 0.631136783 0.631136783 0 dco FBtr0085743|FBtr0085742|FBtr0085744|FBtr0334548 31055184|31055184|31055184|31054083 31056528|31056528|31056528|31056528 3R - 31055502 31055540 3'utr dco FlyBase G55992.1 CTTTCGTGGTCTGCACTTTGCTGCCTGTGTTCATATATA 6 31055524 0.981246061 4 4 44 0.875 0.84509804 0.125 0.166666667 0.375 6 1 0 7 3R:31055502-31055540 8 dco FBtr0085744|FBtr0334548|FBtr0085743|FBtr0085742 31055184|31054083|31055184|31055184 31056528|31056528|31056528|31056528 TGTGTTCA 8mer-A1 dme-miR-317-3p 3R - 31055505 31055541 3'utr dco FlyBase G42254.1 ACTTTCGTGGTCTGCACTTTGCTGCCTGTGTTCATAT 7 31055525 0.755162635 4 5 55 0.75 0.77815125 0 0.142857143 0.25 7 2 0 6 3R:31055505-31055541 8 3.5 3830 FBgn0002413 1939.763333 65.62333333 100.4966667 0.001804344 0.053334688 0.034827026 9 10 9.5 0.1 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 31055692 31055699 - 3R_31055692_31055699_- 0.625363978 0.625364009 0.625363993 0 dco FBtr0085743|FBtr0085742|FBtr0085744|FBtr0334548 31055184|31055184|31055184|31054083 31056528|31056528|31056528|31056528 3R - 31055624 31055748 3'utr dco FlyBase G55993.1 GTAACCTAAGTTGATGGTAAAATGATTGCGATTACCACGTGCAGTTCTCTAGCTTTAAGCAACGCTCTGACTTATAAGGCCCTCCTATGTTATATTATGTAACCTTCTGTACCGCCTACTCCCCT 59 31055709 0.90956727 18 53 479 0.910447761 1.30820858 0.313432836 0.101694915 0.208955224 59 4 2 61 3R:31055624-31055748 8 dco FBtr0085744|FBtr0334548|FBtr0085743|FBtr0085742 31055184|31054083|31055184|31055184 31056528|31056528|31056528|31056528 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R - 31055658 31055813 3'utr dco FlyBase G42255.1 AGGCTCTAGCTCTAGCGAATCCAATCCATACAAAAGCATATGCCACACAGCAAGGCACCCACATTGTAACCTAAGTTGATGGTAAAATGATTGCGATTACCACGTGCAGTTCTCTAGCTTTAAGCAACGCTCTGACTTATAAGGCCCTCCTATGTT 35 31055709 0.981664305 15 32 233 0.964285714 1.255272505 0.285714286 0.485714286 0.678571429 35 0 2 54 3R:31055658-31055813 8 32 3831 FBgn0002413 1939.763333 65.62333333 100.4966667 0.016496858 0.487631432 0.318418521 10 10 10 0.1 dme-miR-14-3p 6mer2-7 AGACTG 3R 31228017 31228022 + 3R_31228017_31228022_+ 1 1 1 0 CG12054 FBtr0085758 31227841 31228491 3R + 31227902 31228062 3'utr CG12054 FlyBase G47283.1 AAATTGACCAGCTTGTCCGTATACGAAAGACATTCTAGACTCGACAGAATGCCGATCTTCTTGGGGGCAGTCCAGCCCACTCACTCACCAAAACACACATTTGGAAACATTTCGTAGACTGCTTACTTGTTCTTAGTTTAGACTTCGAGTCCAATCAATTG 130 31228016 0.984629081 24 125 993 0.968944099 2.193124598 0.099378882 0.2 0.354037267 130 5 0 156 3R:31227902-31228062 6 CG12054 FBtr0085758 31227841 31228491 AGACTG 6mer2-7 dme-miR-14-3p 3R + 31227992 31228058 3'utr CG12054 FlyBase G35667.1 AAACACACATTTGGAAACATTTCGTAGACTGCTTACTTGTTCTTAGTTTAGACTTCGAGTCCAATCA 74 31228015 0.919267044 14 68 579 0.923076923 2.033423755 0.025641026 0.445945946 0.64957265 74 9 0 108 3R:31227992-31228058 6 81.5 3832 FBgn0039831 3333.656667 103.7033333 158.5733333 0.024447629 0.785895664 0.51395779 1 2 1.5 0.1 dme-bantam-3p 7mer-m8 TGATCTC 3R 31228214 31228220 + 3R_31228214_31228220_+ 0.6616152 0.661615215 0.661615207 0 CG12054 FBtr0085758 31227841 31228491 3R + 31228160 31228245 3'utr CG12054 FlyBase G47285.1 ATTCATCGATTGTATGTATGACTTTCATGCTTGTATTAAACTATTTACAACTGCTGATCTCCTCTTAATTTAATTAGGCTATGCAA 340 31228213 0.828338802 19 323 3019 0.955916473 1.836745966 0.011600928 0.217647059 0.382830626 340 14 5 412 3R:31228160-31228245 7 CG12054 FBtr0085758 31227841 31228491 TGATCTC 7mer-m8 dme-bantam-3p 3R + 31228156 31228245 3'utr CG12054 FlyBase G35668.1 ATTTATTCATCGATTGTATGTATGACTTTCATGCTTGTATTAAACTATTTACAACTGCTGATCTCCTCTTAATTTAATTAGGCTATGCAA 215 31228212 0.83012683 19 196 1897 0.912052117 1.84509804 0.016286645 0.339534884 0.537459283 215 24 3 280 3R:31228156-31228245 7 253.5 3833 FBgn0039831 3333.656667 103.7033333 158.5733333 0.076042624 2.444473016 1.598629446 1 2 1.5 0.1 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 31229157 31229163 + 3R_31229157_31229163_+ 0.821045575 0.81991607 0.820480823 0.000798677 CG12054 FBtr0335408|FBtr0113312|FBtr0335409 31229123|31229123|31229123 31231259|31229387|31229387 3R + 31229132 31229188 3'utr CG12054 FlyBase G47288.1 ATCGGATGAGAAGGCAAGAGAGTTGGCTGTGATGAAGTAGTAACTAACTGACTAACA 385 31229155 0.780017737 10 378 2042 0.977375566 1.857332496 0.332579186 0.124675325 0.237556561 385 5 5 432 3R:31229132-31229188 7 CG12054 FBtr0335409|FBtr0113312|FBtr0335408 31229123|31229123|31229123 31229387|31229387|31231259 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R + 31229127 31229245 3'utr CG12054 FlyBase G35673.1 GGCATATCGGATGAGAAGGCAAGAGAGTTGGCTGTGATGAAGTAGTAACTAACTGACTAACAAACCTGACAAGAGGCGGAGAAAGAGGATTCGTCAATAAGGCAGATGGGAAAAGGATG 345 31229155 0.837597036 10 336 1742 0.974854932 2.225309282 0.353965184 0.344927536 0.562862669 345 11 2 504 3R:31229127-31229245 7 358.5 3834 FBgn0039831 3333.656667 103.7033333 158.5733333 0.107539569 3.456976632 2.260783654 2 2 2 0.1 dme-miR-184-5p 6mer2-7 GATAAG 3R 31229274 31229279 + 3R_31229274_31229279_+ 0.996255737 0.999778734 0.998017235 0.002491137 CG12054 FBtr0335408|FBtr0113312|FBtr0335409 31229123|31229123|31229123 31231259|31229387|31229387 3R + 31229200 31229319 3'utr CG12054 FlyBase G47289.1 AGGCGGAGAAAGAGGATTCGTCAATAAGGCAGATGGGAAAAGGATGCAGAAGCTGCAGCAATTAATGAAGGAGGGATAAGTGAGGGAGTTGGGCGCCGCCCTACGGTCCTTAGAGAAGTT 32 31229276 0.953777241 9 25 113 0.777777778 1.146128036 0.361111111 0.09375 0.194444444 32 7 1 28 3R:31229200-31229319 6 CG12054 FBtr0335409|FBtr0113312|FBtr0335408 31229123|31229123|31229123 31229387|31229387|31231259 GATAAG 6mer2-7 dme-miR-184-5p 3R + 31229263 31229312 3'utr CG12054 FlyBase G35674.1 AATGAAGGAGGGATAAGTGAGGGAGTTGGGCGCCGCCCTACGGTCCTTAG 12 31229277 0.85984139 4 10 38 0.95 1.278753601 0.4 0.416666667 0.65 12 1 0 19 3R:31229263-31229312 6 10 3835 FBgn0039831 3333.656667 103.7033333 158.5733333 0.002999709 0.096428916 0.063062306 -2 -3 -2.5 0.1 dme-miR-277-3p 6mer2-7 GCATTT 3R 31229427 31229432 + 3R_31229427_31229432_+ 0.79495643 0.99768481 0.89632062 0.143350626 CG12054 FBtr0335408 31229123 31231259 3R + 31229406 31229442 3'utr CG12054 FlyBase G47291.1 AAAAACAGAAACAAATTCCAAGCATTTCGCAACTATT 17 31229421 0.946637195 2 17 73 1 1.361727836 0.130434783 0.294117647 0.47826087 17 0 0 23 3R:31229406-31229442 6 CG12054 FBtr0335408 31229123 31231259 GCATTT 6mer2-7 dme-miR-277-3p 3R + 31229408 31229437 3'utr CG12054 FlyBase G35675.1 AAACAGAAACAAATTCCAAGCATTTCGCAA 8 31229421 0.935390992 2 8 31 1 1.079181246 0.416666667 0.375 0.583333333 8 0 0 12 3R:31229408-31229437 6 12.5 3836 FBgn0039831 3333.656667 103.7033333 158.5733333 0.003749636 0.120536145 0.078827882 6 6 6 0.1 dme-miR-79-3p 7mer-A1 AGCTTTA 3R 31229533 31229539 + 3R_31229533_31229539_+ 0.821635262 0.821771713 0.821703487 9.64E-05 CG12054 FBtr0335408 31229123 31231259 3R + 31229475 31229554 3'utr CG12054 FlyBase G47292.1 ATTAAACCTAATCTCAAACATATTTAAGCTGGCCTGCTTAGAAAAGCTTCTCTAAAACAGCTTTAGATAATTTTAAAATT 13 31229537 0.957037685 6 13 90 1 1.146128036 0.214285714 0.076923077 0.142857143 13 0 0 14 3R:31229475-31229554 7 CG12054 FBtr0335408 31229123 31231259 AGCTTTA 7mer-A1 dme-miR-79-3p 3R + 31229488 31229547 3'utr CG12054 FlyBase G35676.1 TCAAACATATTTAAGCTGGCCTGCTTAGAAAAGCTTCTCTAAAACAGCTTTAGATAATTT 10 31229537 0.807593151 5 8 74 0.75 0.954242509 0.333333333 0.2 0.333333333 10 3 0 9 3R:31229488-31229547 7 5.5 3837 FBgn0039831 3333.656667 103.7033333 158.5733333 0.00164984 0.053035904 0.034684268 -4 -4 -4 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3R 31229651 31229657 + 3R_31229651_31229657_+ 0.731009755 0.753689717 0.742349736 0.016037111 CG12054 FBtr0335408 31229123 31231259 3R + 31229608 31229678 3'utr CG12054 FlyBase G47293.1 AGCGACAACATTTTAGTAAATACATTTGGAGAATTTTCTTCAACTAGTCATTATTGTAGTTAAATTAAATT 91 31229633 0.770142959 16 89 930 0.980392157 2 0.078431373 0.10989011 0.205882353 91 2 0 100 3R:31229608-31229678 7 CG12054 FBtr0335408 31229123 31231259 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 31229592 31229678 3'utr CG12054 FlyBase G35677.1 AAAAATTAATTATACAAGCGACAACATTTTAGTAAATACATTTGGAGAATTTTCTTCAACTAGTCATTATTGTAGTTAAATTAAATT 44 31229659 0.989950037 15 44 435 1 1.819543936 0.075757576 0.454545455 0.636363636 44 0 0 66 3R:31229592-31229678 7 38.5 3838 FBgn0039831 3333.656667 103.7033333 158.5733333 0.01154888 0.371251326 0.242789876 18 -8 5 0.1 dme-miR-305-5p 7mer-m1 GTACAAT 3R 31229775 31229781 + 3R_31229775_31229781_+ 0.765586663 0.76558636 0.765586511 2.12E-07 CG12054 FBtr0335408 31229123 31231259 3R + 31229701 31229835 3'utr CG12054 FlyBase G47294.1 ACATAACTTTCTAACCTACTGGTTGGTGGAATTCCCGAACCCTATATTTATAACTTAAGAAACCTCTATCCTGTGTACAATTTCAATGAAATCTTAGTGAAGGGTCTTTCCCCAATCAGTTGTTTGCGTCATTTT 50 31229795 0.987434289 19 44 404 0.901639344 1.439332694 0.37704918 0.18 0.327868852 50 5 1 55 3R:31229701-31229835 7 CG12054 FBtr0335408 31229123 31231259 GTACAAT 7mer-m1 dme-miR-305-5p 3R + 31229759 31229822 3'utr CG12054 FlyBase G35679.1 GAAACCTCTATCCTGTGTACAATTTCAATGAAATCTTAGTGAAGGGTCTTTCCCCAATCAGTTG 22 31229794 0.668951611 8 19 170 0.838709677 1.414973348 0.483870968 0.318181818 0.516129032 22 5 0 26 3R:31229759-31229822 7 19.5 3839 FBgn0039831 3333.656667 103.7033333 158.5733333 0.005849433 0.188036386 0.122971496 -20 -19 -19.5 0.1 dme-miR-1008-3p 7mer-m8 AGCTGTG 3R 31230131 31230137 + 3R_31230131_31230137_+ 0.638166284 0.591524814 0.614845549 0.032980521 CG12054 FBtr0335408 31229123 31231259 3R + 31230108 31230153 3'utr CG12054 FlyBase G47298.1 TATAGAGCAGAGCATGCATCTGTAGCTGTGTGAGTGTTTGTCCGTG 45 31230138 0.663285063 7 43 337 0.964285714 1.431363764 0.482142857 0.2 0.357142857 45 1 1 54 3R:31230108-31230153 7 CG12054 FBtr0335408 31229123 31231259 AGCTGTG 7mer-m8 dme-miR-1008-3p 3R + 31230110 31230153 3'utr CG12054 FlyBase G35681.1 TAGAGCAGAGCATGCATCTGTAGCTGTGTGAGTGTTTGTCCGTG 31 31230138 0.742704348 7 31 209 1 1.662757832 0.608695652 0.322580645 0.543478261 31 0 0 46 3R:31230110-31230153 7 38 3840 FBgn0039831 3333.656667 103.7033333 158.5733333 0.011398894 0.36642988 0.239636761 -7 -7 -7 0.1 dme-miR-14-3p 7mer-m8 AAGACTG 3R 31230801 31230807 + 3R_31230801_31230807_+ 0.671793252 0.671784919 0.671789085 5.94E-06 CG12054 FBtr0335408 31229123 31231259 3R + 31230775 31230831 3'utr CG12054 FlyBase G47303.1 AATAAAATGAGTATGTCATCTTATATAAGACTGCTGTTATGTTCGTAAATATATTTA 90 31230799 0.703281641 9 84 844 0.904761905 1.977723605 0.142857143 0.144444444 0.266666667 90 10 0 95 3R:31230775-31230831 7 CG12054 FBtr0335408 31229123 31231259 AAGACTG 7mer-m8 dme-miR-14-3p 3R + 31230777 31230830 3'utr CG12054 FlyBase G35684.1 TAAAATGAGTATGTCATCTTATATAAGACTGCTGTTATGTTCGTAAATATATTT 75 31230799 0.701161977 9 61 664 0.836538462 1.939519253 0.115384615 0.293333333 0.490384615 75 17 0 87 3R:31230777-31230830 7 80 3841 FBgn0039831 3333.656667 103.7033333 158.5733333 0.023997672 0.771431327 0.504498444 2 2 2 0.1 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3R 31256475 31256480 + 3R_31256475_31256480_+ 0.673624331 0.673064072 0.673344202 0.000396121 spn-F FBtr0085760 31256404 31256659 3R + 31256423 31256519 stop_codon spn-F FlyBase G47315.1 TTTCGCCACCGAACTCTGACCTGACCGGAGAAATCCAAGGATTAAGGAGCAGTTTGACTGCGCAGGAGCCGCTTGTTACGTTTCTATTGATAAGACG 41 31256476 0.826600605 10 36 165 0.928571429 1.591064607 0.214285714 0.024390244 0.047619048 41 3 0 39 3R:31256423-31256519 6 spn-F FBtr0085760|FBtr0330079 31256404|31256440 31256659|31256659 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3R + 31256466 31256557 3'utr spn-F FlyBase G35690.1 AAGGAGCAGTTTGACTGCGCAGGAGCCGCTTGTTACGTTTCTATTGATAAGACGTTAGGGCGATCATGTATCAAAACTATACAACATTGAAC 17 31256475 0.971174007 7 16 94 0.962962963 1.414973348 0.259259259 0.294117647 0.555555556 17 1 0 26 3R:31256466-31256557 6 15 3842 FBgn0086362 186.31 15.49 23.55333333 0.080510976 0.968366688 0.636852533 -1 0 -0.5 0.1 dme-miR-1002-5p 8mer-A1 CTACTTAA 3R 31401470 31401477 + 3R_31401470_31401477_+ 0.622463905 0.62321625 0.622840078 0.000532027 Gcn2 FBtr0334552|FBtr0085787|FBtr0334551 31401376|31401376|31401376 31401560|31402013|31401560 3R + 31401416 31401501 3'utr Gcn2 FlyBase G47330.1 AGACCAGCCAGTAGTGTAAGCTCGAAAGTGTCACAAATTATTTTCGCCGAAATTCTACTTAACTGGCTGCCCTCCGTGCCATTAAC 11 31401487 0.945997837 8 11 66 1 1.113943352 0.076923077 0.090909091 0.230769231 11 0 0 13 3R:31401416-31401501 8 Gcn2 FBtr0334552|FBtr0085787|FBtr0334551 31401376|31401376|31401376 31401560|31402013|31401560 CTACTTAA 8mer-A1 dme-miR-1002-5p 3R + 31401458 31401496 3'utr Gcn2 FlyBase G35701.1 TTCGCCGAAATTCTACTTAACTGGCTGCCCTCCGTGCCA 8 31401468 0.953398027 5 6 50 0.642857143 0.954242509 0.285714286 0.625 0.785714286 8 5 0 9 3R:31401458-31401496 8 7 3843 FBgn0019990 1106.633333 23.54666667 35.94666667 0.006325492 0.297281993 0.194732938 -17 2 -7.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 31401608 31401613 + 3R_31401608_31401613_+ 1 0.999999912 0.999999956 7.07E-08 Gcn2 FBtr0085787 31401376 31402013 3R + 31401594 31401629 3'utr Gcn2 FlyBase G47331.1 TTATTGAATGCCTTTCTAGTGGAAGCTCTCATTCAT 18 31401607 0.614506343 5 16 143 0.904761905 1.278753601 0.19047619 0.111111111 0.238095238 18 2 0 19 3R:31401594-31401629 6 Gcn2 FBtr0085787 31401376 31402013 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 31401596 31401626 3'utr Gcn2 FlyBase G35702.1 ATTGAATGCCTTTCTAGTGGAAGCTCTCATT 7 31401607 0.662043147 2 7 52 1 1.079181246 0.25 0.571428571 0.75 7 0 0 12 3R:31401596-31401626 6 12.5 3844 FBgn0019990 1106.633333 23.54666667 35.94666667 0.011295521 0.530860702 0.347737389 1 1 1 0.1 dme-miR-282-5p 8mer-A1 AGAGGCTA 3R 31401801 31401808 + 3R_31401801_31401808_+ 0.637903504 0.63790471 0.637904107 8.49E-07 Gcn2 FBtr0085787 31401376 31402013 3R + 31401783 31401829 3'utr Gcn2 FlyBase G47332.1 TCGAAATTAAAGTTAAGTAGAGGCTAATATTTTCAGAGAAAATTCTT 48 31401800 0.893086411 7 46 326 0.949152542 1.271066772 0.084745763 0.229166667 0.372881356 48 1 2 56 3R:31401783-31401829 8 Gcn2 FBtr0085787 31401376 31402013 AGAGGCTA 8mer-A1 dme-miR-282-5p 3R + 31401783 31401821 3'utr Gcn2 FlyBase G35704.1 TCGAAATTAAAGTTAAGTAGAGGCTAATATTTTCAGAGA 35 31401800 0.870531403 5 34 228 0.979166667 1.672097858 0 0.285714286 0.479166667 35 1 0 47 3R:31401783-31401821 8 41.5 3845 FBgn0019990 1106.633333 23.54666667 35.94666667 0.03750113 1.762457531 1.154488131 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 31456999 31457004 + 3R_31456999_31457004_+ 0.999991658 0.99997305 0.999982354 1.32E-05 Gprk2 FBtr0085788|FBtr0085788|FBtr0085788 31456465|31456465|31456465 31457873|31457873|31457873 3R + 31456983 31457098 3'utr Gprk2 FlyBase G47360.1 TTTTTGTATAGTAGTTTGTGATCGACGGGACAGCGTTGGACGATAGATGTTCTAGTTAGCATTTGTAAGTTAAGAAAATGACATGAATACTCGAAAACTTGAATGCATTTTTAACA 66 31456998 0.719675097 21 59 480 0.898734177 1.851258349 0.341772152 0.181818182 0.316455696 66 8 0 71 3R:31456983-31457098 6 Gprk2 FBtr0085788|FBtr0085788|FBtr0085788 31456465|31456465|31456465 31457873|31457873|31457873 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 31456950 31457059 3'utr Gprk2 FlyBase G35733.1 ACAGCACTACGTAGACGGCTGAGTAATATGTAATTTTTGTATAGTAGTTTGTGATCGACGGGACAGCGTTGGACGATAGATGTTCTAGTTAGCATTTGTAAGTTAAGAAA 52 31456998 0.98585672 11 45 372 0.879518072 1.562292864 0.481927711 0.5 0.686746988 52 9 1 73 3R:31456950-31457059 6 35 3846 FBgn0261988 1488.626667 40.02 61.47666667 0.023511604 0.874562719 0.569321694 1 1 1 0.1 dme-miR-1006-3p 7mer-A1 GAATTTA 3R 31457481 31457487 + 3R_31457481_31457487_+ 0.823346209 0.823349562 0.823347885 2.40E-06 Gprk2 FBtr0085788 31456465 31457873 3R + 31457453 31457512 3'utr Gprk2 FlyBase G47364.1 AGAAAGAAACAAAAGTAAACCAATTGGAGAATTTATTATGTTAGTATGAAAATTAATTAT 10 31457476 0.989455083 6 10 92 1 1.041392685 0.363636364 0.1 0.181818182 10 0 0 11 3R:31457453-31457512 7 Gprk2 FBtr0085788 31456465 31457873 GAATTTA 7mer-A1 dme-miR-1006-3p 3R + 31457452 31457500 3'utr Gprk2 FlyBase G35738.1 AAGAAAGAAACAAAAGTAAACCAATTGGAGAATTTATTATGTTAGTATG 7 31457484 0.98631948 4 6 47 0.909090909 1 0.363636364 0.285714286 0.545454545 7 1 0 10 3R:31457452-31457500 7 7.5 3847 FBgn0261988 1488.626667 40.02 61.47666667 0.005038201 0.187406297 0.121997506 5 -3 1 0.1 dme-miR-1003-3p 8mer-A1 ATGTGAGA 3R 31575989 31575996 - 3R_31575989_31575996_- 0.643565134 0.643564528 0.643564831 4.24E-07 pygo FBtr0085806 31575833 31576891 3R - 31575922 31576012 3'utr pygo FlyBase G56037.1 AAGAAATTATGAATTCATGTGAGAAAGGTTAATTTGTAATTTAAGACGAATGTGGAGGACGCAGCGAACATAAACGATTCAAACGAGAAAA 25 31575999 0.951748212 6 22 141 0.888888889 1.380211242 0.37037037 0.08 0.148148148 25 3 0 24 3R:31575922-31576012 8 pygo FBtr0085806 31575833 31576891 ATGTGAGA 8mer-A1 dme-miR-1003-3p 3R - 31575942 31576012 3'utr pygo FlyBase G42287.1 AAGAAATTATGAATTCATGTGAGAAAGGTTAATTTGTAATTTAAGACGAATGTGGAGGACGCAGCGAACAT 13 31575999 0.973276884 3 13 84 1 1.278753601 0.263157895 0.384615385 0.578947368 13 0 0 19 3R:31575942-31576012 8 14.5 3848 FBgn0043900 862.0266667 23.10666667 35.35666667 0.016820825 0.627524524 0.410106533 3 3 3 0.1 dme-miR-980-3p 8mer-A1 GGCAGCTA 3R 31576686 31576693 - 3R_31576686_31576693_- 0.668734318 0.668709228 0.668721773 1.77E-05 pygo FBtr0085806 31575833 31576891 3R - 31576661 31576713 3'utr pygo FlyBase G56043.1 GACCCACCAGTCCCCATCCCGGCAGCTAAGCCCCGTAGCCAGAATGCGAACCA 16 31576698 0.835690792 5 16 35 1 1.230448921 0.058823529 0.0625 0.117647059 16 0 0 17 3R:31576661-31576713 8 pygo FBtr0085806 31575833 31576891 GGCAGCTA 8mer-A1 dme-miR-980-3p 3R - 31576672 31576709 3'utr pygo FlyBase G42290.1 CACCAGTCCCCATCCCGGCAGCTAAGCCCCGTAGCCAG 7 31576698 0.733471962 2 5 19 0.666666667 0.77815125 0 0.285714286 0.444444444 7 3 0 6 3R:31576672-31576709 8 11.5 3849 FBgn0043900 862.0266667 23.10666667 35.35666667 0.013340655 0.497691864 0.325256906 5 5 5 0.1 dme-miR-1007-3p 8mer-A1 TGAGCTTA 3R 31596910 31596917 - 3R_31596910_31596917_- 0.62536332 0.625363312 0.625363316 0 CycG FBtr0333328 31596640 31599272 3R - 31596869 31597076 3'utr CycG FlyBase G56057.2 ATTTTACATTGTATTTAGCGCGGAGTTAGTTAAATATTTGCAAGTATCAACATCAAAAACATGAATGAAAATCTCAATTATTGTATATTTAGTTTTTATTTGACGACTACTTTTATTCATGATAACAATGATGGTGGGCAATTGCCCATCGTCAAGTTTTGAGCTTATATTCGGTTGAGGTTTACACTTTAGGATTAGTTACCACACG 224 31596917 0.867040235 34 214 2256 0.957198444 2.390935107 0.089494163 0.133928571 0.245136187 224 11 0 246 3R:31596869-31597076 8 CycG FBtr0333328 31596640 31599272 TGAGCTTA 8mer-A1 dme-miR-1007-3p 3R - 31596874 31597077 3'utr CycG FlyBase G42303.1 AATTTTACATTGTATTTAGCGCGGAGTTAGTTAAATATTTGCAAGTATCAACATCAAAAACATGAATGAAAATCTCAATTATTGTATATTTAGTTTTTATTTGACGACTACTTTTATTCATGATAACAATGATGGTGGGCAATTGCCCATCGTCAAGTTTTGAGCTTATATTCGGTTGAGGTTTACACTTTAGGATTAGTTACC 133 31596917 0.779429794 29 131 1301 0.974619289 2.283301229 0.121827411 0.368421053 0.573604061 133 5 0 192 3R:31596874-31597077 8 111 3850 FBgn0039858 20619.65667 595.7166667 909.0766667 0.005383213 0.186330191 0.122101913 0 0 0 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 31597223 31597229 - 3R_31597223_31597229_- 0.661615435 0.661615614 0.661615524 1.41E-07 CycG FBtr0333328 31596640 31599272 3R - 31597130 31597277 3'utr CycG FlyBase G56058.1 AGTCGAAATGCGAAACAAATAATTATATTTAAGCGACGGAGATCATCATGTGTTCGTTTAAGCTTAGTCCACTATAAATAACAGCCAATTGACGATTAGGCGATTAAGAGAAAGGTGAAAGCGGTGAAAATATGTCTAGCACTAAGTT 195 31597229 0.987348193 21 182 1601 0.944700461 1.533602611 0.235023041 0.112820513 0.202764977 195 7 5 205 3R:31597130-31597277 7 CycG FBtr0333328 31596640 31599272 TGTGTTC 7mer-m8 dme-miR-317-3p 3R - 31597127 31597351 3'utr CycG FlyBase G42304.1 CTGAACCACAGCCTGAAGATCAGTTCTGTGAAAGCTGTGAGTGAGAAAGCAGAATCCGAATACATTGTTAACACAGTCGAAATGCGAAACAAATAATTATATTTAAGCGACGGAGATCATCATGTGTTCGTTTAAGCTTAGTCCACTATAAATAACAGCCAATTGACGATTAGGCGATTAAGAGAAAGGTGAAAGCGGTGAAAATATGTCTAGCACTAAGTTTTT 154 31597229 0.975900291 31 143 1078 0.931914894 1.437354128 0.170212766 0.402597403 0.608510638 154 9 7 219 3R:31597127-31597351 7 121 3851 FBgn0039858 20619.65667 595.7166667 909.0766667 0.005868187 0.203116694 0.133102085 0 0 0 0.1 dme-miR-980-3p 6mer3-8 GGCAGC 3R 31597661 31597666 - 3R_31597661_31597666_- 0.999998793 0.999998786 0.999998789 0 CycG FBtr0333328 31596640 31599272 3R - 31597639 31597692 3'utr CycG FlyBase G56061.1 CAGAAAACTTTTATTTAAATCCACTTGGCAGCGGAATGTGCAAACTCCTGTCTG 102 31597667 0.834565582 5 97 515 0.976190476 2.089905111 0.03968254 0.176470588 0.333333333 102 3 0 123 3R:31597639-31597692 6 CycG FBtr0333328 31596640 31599272 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 31597599 31597688 3'utr CycG FlyBase G42306.1 AAACTTTTATTTAAATCCACTTGGCAGCGGAATGTGCAAACTCCTGTCTGTAAATTTGAATAAAATGCGTTTGCCCCGCCAAAGGGGCAT 90 31597667 0.949070601 6 88 402 0.993055556 1.854306042 0.020833333 0.444444444 0.652777778 90 0 1 143 3R:31597599-31597688 6 90.5 3852 FBgn0039858 20619.65667 595.7166667 909.0766667 0.004389016 0.151917858 0.09955156 1 1 1 0.1 dme-miR-1012-3p 8mer-A1 TTGACTAA 3R 31598272 31598279 - 3R_31598272_31598279_- 0.626899594 0.626963966 0.62693178 4.55E-05 CycG FBtr0333328 31596640 31599272 3R - 31598186 31598309 3'utr CycG FlyBase G56063.1 AGAAAACTAAAGTATAATTCGCCGCCTGTATTGACTAAGAACTCTTAACAATAATATAATAACTTTAAACAAGGTACAATATGTAGTGTGTGTCTAGTAGATTTTTCTCTGTATAACAAAATCA 40 31598282 0.980977245 13 37 274 0.942307692 1.69019608 0.057692308 0.25 0.423076923 40 3 0 49 3R:31598186-31598309 8 CycG FBtr0333328 31596640 31599272 TTGACTAA 8mer-A1 dme-miR-1012-3p 3R - 31598253 31598323 3'utr CycG FlyBase G42309.1 ACGAGAAAGCCCATAGAAAACTAAAGTATAATTCGCCGCCTGTATTGACTAAGAACTCTTAACAATAATAT 35 31598282 0.999737317 10 32 186 0.941176471 1.681241237 0.098039216 0.382352941 0.588235294 34 3 0 48 3R:31598253-31598323 8 21.5 3853 FBgn0039858 20619.65667 595.7166667 909.0766667 0.001042694 0.036090983 0.023650371 3 3 3 0.1 dme-miR-304-5p 6mer3-8 TGAGAT 3R 31598933 31598938 - 3R_31598933_31598938_- 0.999815577 0.999939554 0.999877565 8.77E-05 CycG FBtr0085800|FBtr0085802|FBtr0085799|FBtr0085803|FBtr0333328 31598801|31598801|31598801|31598801|31596640 31599272|31599272|31599272|31599272|31599272 3R - 31598896 31598980 3'utr CycG FlyBase G56068.1 GTGTATTTGGTAGCGCGCTGGTTCTAACATTTAAGAAACTATTGAGATACGGAAATGTGGGCGCCAAGGTGACGCAGCCACGCCC 45 31598939 0.962937978 7 40 205 0.892857143 0.920818754 0.089285714 0.222222222 0.375 45 1 5 50 3R:31598896-31598980 6 CycG FBtr0333328|FBtr0085800|FBtr0085802|FBtr0085799|FBtr0085803 31596640|31598801|31598801|31598801|31598801 31599272|31599272|31599272|31599272|31599272 TGAGAT 6mer3-8 dme-miR-304-5p 3R - 31598903 31598983 3'utr CycG FlyBase G42312.1 AATGTGTATTTGGTAGCGCGCTGGTTCTAACATTTAAGAAACTATTGAGATACGGAAATGTGGGCGCCAAGGTGACGCAGC 33 31598939 0.956035112 8 33 156 1 1.612783857 0.097560976 0.181818182 0.341463415 33 0 0 41 3R:31598903-31598983 6 33.5 3854 FBgn0039858 20619.65667 595.7166667 909.0766667 0.001624663 0.056234787 0.036850577 1 1 1 0.1 dme-miR-980-3p 8mer-A1 GGCAGCTA 3R 31614950 31614957 + 3R_31614950_31614957_+ 0.668705508 0.668359568 0.668532538 0.000244588 Med FBtr0085815|FBtr0085816|FBtr0337030 31614900|31614900|31614900 31615200|31615200|31615375 3R + 31614865 31614990 stop_codon Med FlyBase G47426.1 CGCCATGCCGATCGATGGCCCGCGTGCCGCCGCCTAATCCGTATTTATTATTGGCCCACATCTATGCTAAGGACTCAGTTTTAGCGGCAGCTATCCGTCAGCTATTTGCGGATTTTGTGTTTTTCA 52 31614945 0.986976867 22 47 404 0.901639344 1.263241435 0.31147541 0.173076923 0.295081967 52 4 2 55 3R:31614865-31614990 8 Med FBtr0337030|FBtr0085815|FBtr0085816 31614900|31614900|31614900 31615375|31615200|31615200 GGCAGCTA 8mer-A1 dme-miR-980-3p 3R + 31614887 31614980 stop_codon Med FlyBase G35778.1 CGTGCCGCCGCCTAATCCGTATTTATTATTGGCCCACATCTATGCTAAGGACTCAGTTTTAGCGGCAGCTATCCGTCAGCTATTTGCGGATTTT 47 31614944 0.987822594 14 37 321 0.863013699 1.322219295 0.260273973 0.425531915 0.630136986 47 8 2 63 3R:31614887-31614980 8 36 3855 FBgn0011655 590.06 20.83333333 31.85 0.061010745 1.728 1.130298273 5 6 5.5 0.1 dme-miR-980-3p 6mer2-7 GCAGCT 3R 31615080 31615085 + 3R_31615080_31615085_+ 0.995801231 0.99259856 0.994199896 0.00226458 Med FBtr0085815|FBtr0085816|FBtr0337030 31614900|31614900|31614900 31615200|31615200|31615375 3R + 31615047 31615100 3'utr Med FlyBase G47428.1 AAAAAATTGAAACAACTTAGAAGTCTTAAGTATGCAGCTGTAAAGCACTAAGCA 14 31615079 0.976095096 6 12 72 0.8125 0.812913357 0.1875 0.142857143 0.25 14 2 1 13 3R:31615047-31615100 6 Med FBtr0337030|FBtr0085815|FBtr0085816 31614900|31614900|31614900 31615375|31615200|31615200 GCAGCT 6mer2-7 dme-miR-980-3p 3R + 31615060 31615100 3'utr Med FlyBase G35779.1 AACTTAGAAGTCTTAAGTATGCAGCTGTAAAGCACTAAGCA 10 31615079 0.770884507 3 8 63 0.8125 1.113943352 0 0.5 0.6875 10 3 0 13 3R:31615060-31615100 6 10 3856 FBgn0011655 590.06 20.83333333 31.85 0.016947429 0.48 0.313971743 1 1 1 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 31621154 31621159 + 3R_31621154_31621159_+ 0.994687525 0.999917585 0.997302555 0.003698239 pasha FBtr0085820|FBtr0337031|FBtr0337032 31621116|31621116|31621116 31621474|31621474|31622217 3R + 31621127 31621166 3'utr pasha FlyBase G47436.1 ACACATCTCTCTCGCCAACATTGATTCTCTAGTAGTGCAT 25 31621148 0.834000715 4 25 222 1 1.431363764 0.333333333 0.08 0.148148148 25 0 0 27 3R:31621127-31621166 6 pasha FBtr0337032|FBtr0337031|FBtr0085820 31621116|31621116|31621116 31622217|31621474|31621474 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 31621127 31621165 3'utr pasha FlyBase G35785.1 ACACATCTCTCTCGCCAACATTGATTCTCTAGTAGTGCA 23 31621148 0.787425111 5 22 176 0.939393939 1.491361694 0.636363636 0.347826087 0.545454545 23 2 0 31 3R:31621127-31621165 6 24 3857 FBgn0039861 490.91 22.87333333 35.41333333 0.048888798 1.049256776 0.677710843 6 6 6 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 31662121 31662126 + 3R_31662121_31662126_+ 0.999997824 0.999998935 0.999998379 7.78E-07 kek6 FBtr0330107|FBtr0085821 31661629|31661608 31664646|31664646 3R + 31662103 31662140 3'utr kek6 FlyBase G47438.1 AGGTATAGCGACCAAAACTGATCTTCATAAGGTGTATA 10 31662121 0.908221345 2 10 50 1 1.041392685 0.454545455 0.1 0.181818182 10 0 0 11 3R:31662103-31662140 6 kek6 FBtr0330107|FBtr0085821 31661629|31661608 31664646|31664646 TGATCT 6mer3-8 dme-bantam-3p 3R + 31662101 31662142 3'utr kek6 FlyBase G35786.1 TAAGGTATAGCGACCAAAACTGATCTTCATAAGGTGTATAGT 8 31662121 0.90908133 3 8 50 1 1 0.2 0.25 0.4 8 0 0 10 3R:31662101-31662142 6 9 3858 FBgn0039862 176.9033333 3.166666667 4.81 0.050875243 2.842105263 1.871101871 0 0 0 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 31676639 31676644 + 3R_31676639_31676644_+ 0.997207098 0.992680252 0.994943675 0.003200931 CG1815 FBtr0085823|FBtr0085823|FBtr0085823 31675699|31675699|31675699 31677971|31677971|31677971 3R + 31676589 31676675 3'utr CG1815 FlyBase G47457.1 GCGAATTGCATGCGTGAGGCGCAGTTGTACTGCTGTTGGAACACATCCTACTGTGACTATCCCTGCCAGCAGCTTCACTGGCCTGGA 14 31676637 0.967580579 8 13 74 1 1.204119983 0.1875 0.142857143 0.25 14 0 0 16 3R:31676589-31676675 6 CG1815 FBtr0085823|FBtr0085823|FBtr0085823 31675699|31675699|31675699 31677971|31677971|31677971 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 31676594 31676658 3'utr CG1815 FlyBase G35798.1 TTGCATGCGTGAGGCGCAGTTGTACTGCTGTTGGAACACATCCTACTGTGACTATCCCTGCCAGC 5 31676646 0.981573819 3 4 39 0.857142857 0.77815125 0.428571429 0.4 0.571428571 5 1 0 6 3R:31676594-31676658 6 4.5 3859 FBgn0039863 1117.306667 23.11666667 35.54333333 0.004027542 0.194664744 0.126606021 2 -7 -2.5 0.1 dme-miR-14-3p 6mer3-8 AAGACT 3R 31677796 31677801 + 3R_31677796_31677801_+ 0.999800053 0.962070611 0.980935332 0.026678785 CG1815 FBtr0085823|FBtr0085824 31675699|31677452 31677971|31677971 3R + 31677779 31677871 3'utr CG1815 FlyBase G47462.2 TTAACCGCGTAGTAAGTAAGACTCATTGTGAAGCCATCAGATGGACTTGGCCTAATCATAGCAACTAGTAGTCTGTAAGGGCATCTCAATTTC 204 31677804 0.844985526 12 195 1144 0.967078189 1.672097858 0.119341564 0.176470588 0.308641975 204 4 4 235 3R:31677779-31677871 6 CG1815 FBtr0085823|FBtr0085824 31675699|31677452 31677971|31677971 AAGACT 6mer3-8 dme-miR-14-3p 3R + 31677777 31677861 3'utr CG1815 FlyBase G35801.2 ACTTAACCGCGTAGTAAGTAAGACTCATTGTGAAGCCATCAGATGGACTTGGCCTAATCATAGCAACTAGTAGTCTGTAAGGGCA 134 31677804 0.837302632 11 125 726 0.953051643 1.830374783 0.164319249 0.417910448 0.633802817 134 8 2 203 3R:31677777-31677861 6 79 3860 FBgn0039863 1117.306667 23.11666667 35.54333333 0.070705745 3.417447729 2.222639032 -8 -8 -8 0.1 dme-miR-92b-3p 8mer-m1 GTGCAATT 3R 31730930 31730937 + 3R_31730930_31730937_+ 0.595001483 0.596053444 0.595527463 0.000743806 ttk FBtr0085826|FBtr0303228|FBtr0085828|FBtr0085830 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 3R + 31730879 31730979 3'utr ttk FlyBase G47480.1 TGGCTTCGATGGAGCTGCAGAAATCTCCAAGCCAGCAGACGTTTTTATGTTGTGCAATTTACCTTTTCAGTTACAATTACACTTATTTTCTAAACCCCCTT 26 31730944 0.904045697 10 26 215 1 1.568201724 0.081081081 0.384615385 0.567567568 26 0 0 37 3R:31730879-31730979 8 ttk FBtr0085830|FBtr0303228|FBtr0085828|FBtr0085826 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 GTGCAATT 8mer-m1 dme-miR-92b-3p 3R + 31730925 31730969 3'utr ttk FlyBase G35814.1 ATGTTGTGCAATTTACCTTTTCAGTTACAATTACACTTATTTTCT 10 31730955 0.949634349 4 10 91 1 1.079181246 0 0.1 0.25 10 0 0 12 3R:31730925-31730969 8 7.5 3861 FBgn0003870 1332.35 36.30666667 55.43333333 0.005629151 0.206573632 0.135297655 -14 -25 -19.5 0.1 dme-miR-283-5p 6mer3-8 TGATAT 3R 31731292 31731297 + 3R_31731292_31731297_+ 0.994717571 0.564280969 0.77949927 0.304364639 ttk FBtr0085826|FBtr0303228|FBtr0085828|FBtr0085830 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 3R + 31731103 31731345 3'utr ttk FlyBase G47481.1 GACCGAAAATCAAGTAGTTGCTTTGGCTGACACTTTACAAACCCATCCACTAGGGGTTGCCTTTTTATTGGACACCAGAGCGGCCTTATATGCGAAGTGTATCCGGGCAAGAGTTACACTAAAAACCGAAACTAAACCTGCACTTTTAGATAATTAAACTATATATACACGCGGATATGTTATACATAATGATATAAATAATATATATAAACATTGAATGGTATGTCTAGCTGTAGTTCTATT 67 31731281 0.97868302 31 61 453 0.886075949 1.243038049 0.113924051 0.164179104 0.291139241 67 6 3 70 3R:31731103-31731345 6 ttk FBtr0085830|FBtr0303228|FBtr0085828|FBtr0085826 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 TGATAT 6mer3-8 dme-miR-283-5p 3R + 31731137 31731342 3'utr ttk FlyBase G35815.1 TTACAAACCCATCCACTAGGGGTTGCCTTTTTATTGGACACCAGAGCGGCCTTATATGCGAAGTGTATCCGGGCAAGAGTTACACTAAAAACCGAAACTAAACCTGCACTTTTAGATAATTAAACTATATATACACGCGGATATGTTATACATAATGATATAAATAATATATATAAACATTGAATGGTATGTCTAGCTGTAGTTCT 48 31731282 0.976345758 24 48 310 1 1.857332496 0.222222222 0.3125 0.541666667 48 0 0 72 3R:31731137-31731342 6 10.5 3862 FBgn0003870 1332.35 36.30666667 55.43333333 0.007880812 0.289203085 0.189416717 11 10 10.5 0.1 dme-miR-31a-5p 6mer3-8 TCTTGC 3R 31731452 31731457 + 3R_31731452_31731457_+ 0.999683222 0.946589347 0.973136285 0.037543057 ttk FBtr0085826|FBtr0303228|FBtr0085828|FBtr0085830 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 3R + 31731393 31731552 3'utr ttk FlyBase G47482.1 ATAAAATTATTACAAGCCGAAATCTGAAAACAGAAGCAGGATAATCAATGTAATGTTAATCTTGCGAGAGGGAGCGCAGATCTACCTTGTTGCCTTCAAATGAAGCTAGTTAAAAGTTAATCCCGGGTCTGGGTCAAGGTCGTTGGGCACCCAGCACCAC 27 31731473 0.969651034 15 24 133 0.911764706 1.190331698 0.147058824 0.222222222 0.382352941 27 2 1 31 3R:31731393-31731552 6 ttk FBtr0085830|FBtr0303228|FBtr0085828|FBtr0085826 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 TCTTGC 6mer3-8 dme-miR-31a-5p 3R + 31731441 31731506 3'utr ttk FlyBase G35816.1 TGTAATGTTAATCTTGCGAGAGGGAGCGCAGATCTACCTTGTTGCCTTCAAATGAAGCTAGTTAAA 17 31731474 0.791689802 9 17 105 1 1.414973348 0.076923077 0.529411765 0.692307692 17 0 0 26 3R:31731441-31731506 6 6.5 3863 FBgn0003870 1332.35 36.30666667 55.43333333 0.004878598 0.179030481 0.117257968 -21 -22 -21.5 0.1 dme-miR-282-5p 6mer2-7 GAGGCT 3R 31731787 31731792 + 3R_31731787_31731792_+ 0.99940143 0.999999908 0.999700669 0.000423203 ttk FBtr0085826|FBtr0303228|FBtr0085828|FBtr0085830 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 3R + 31731760 31731826 3'utr ttk FlyBase G47484.1 CTATCAAACGATTTATGTTGTATATCGGAGGCTTAAATTATCGCCAAAGAAAATGAAAATCAAAAAC 27 31731775 0.95655443 8 24 199 0.911764706 1.190331698 0.235294118 0.148148148 0.323529412 27 2 1 31 3R:31731760-31731826 6 ttk FBtr0085830|FBtr0303228|FBtr0085828|FBtr0085826 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 GAGGCT 6mer2-7 dme-miR-282-5p 3R + 31731759 31731810 3'utr ttk FlyBase G35819.1 TCTATCAAACGATTTATGTTGTATATCGGAGGCTTAAATTATCGCCAAAGAA 14 31731776 0.965029601 6 13 109 0.857142857 1.255272505 0.238095238 0.428571429 0.619047619 14 3 0 18 3R:31731759-31731810 6 18.5 3864 FBgn0003870 1332.35 36.30666667 55.43333333 0.01388524 0.509548292 0.333734215 12 11 11.5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 31732508 31732514 + 3R_31732508_31732514_+ 0.823348501 0.823349309 0.823348905 5.66E-07 ttk FBtr0085826|FBtr0303228|FBtr0085828|FBtr0085830 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 3R + 31732488 31732519 3'utr ttk FlyBase G47489.1 ATAGAGTCATGCTTTGATGCCCAAAGAAAATG 7 31732505 0.931405691 2 7 40 1 0.84509804 0.142857143 0 0 7 0 0 7 3R:31732488-31732519 7 ttk FBtr0085830|FBtr0303228|FBtr0085828|FBtr0085826 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 31732442 31732524 3'utr ttk FlyBase G35823.1 AAAAATGTCCAAACTCGAAACCTGAACGAGGAATATAGCTACATATATAGAGTCATGCTTTGATGCCCAAAGAAAATGAAAGA 12 31732505 0.925752224 6 12 43 1 1.322219295 0.19047619 0.416666667 0.666666667 12 0 0 21 3R:31732442-31732524 7 6 3865 FBgn0003870 1332.35 36.30666667 55.43333333 0.004503321 0.165258906 0.108238124 3 3 3 0.1 dme-miR-2b-2-5p 6mer3-8 TTGAAG 3R 31734502 31734507 + 3R_31734502_31734507_+ 0.999782566 0.999806891 0.999794728 1.72E-05 ttk FBtr0085827|FBtr0303227|FBtr0085825|FBtr0085829 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 3R + 31734444 31734579 stop_codon ttk FlyBase G47491.1 TGGCGGAGGGCAAGTCCTTGGCTTTGGCCTCTACCGCACAAACCGCAACGTAAAGACTTTGAAGGACCAGAGTTACGGAAGGACTACGAACGCACAACAACGTTTACCTTAAGCAGCGAGCTCTGAACTGTAGAAT 64 31734503 0.923754968 8 63 223 0.986842105 1.875061263 0.315789474 0.15625 0.289473684 64 1 0 75 3R:31734444-31734579 6 ttk FBtr0085825|FBtr0085829|FBtr0303227|FBtr0085827 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 TTGAAG 6mer3-8 dme-miR-2b-2-5p 3R + 31734475 31734521 stop_codon ttk FlyBase G35826.1 TACCGCACAAACCGCAACGTAAAGACTTTGAAGGACCAGAGTTACGG 33 31734503 0.907535055 3 33 105 1 1.662757832 0.152173913 0.272727273 0.47826087 33 0 0 46 3R:31734475-31734521 6 44.5 3866 FBgn0003870 1332.35 36.30666667 55.43333333 0.033399632 1.225670217 0.802766085 -1 -1 -1 0.1 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 31734686 31734693 + 3R_31734686_31734693_+ 0.631136365 0.631136382 0.631136374 0 ttk FBtr0085827|FBtr0303227|FBtr0085825|FBtr0085829 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 3R + 31734595 31734703 3'utr ttk FlyBase G47492.1 AAGCAATCGTGGCACTCAAACGCAACACACCAGACTCAAAACGATTTTTAGTTAATGTAAACCCGTAAGCAATATTAATTCTAACACTTGCTCCGTCCAGAACGCCTTT 44 31734684 0.969524576 11 42 253 0.923076923 1.681241237 0.134615385 0.136363636 0.269230769 44 4 0 48 3R:31734595-31734703 8 ttk FBtr0085825|FBtr0085829|FBtr0303227|FBtr0085827 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R + 31734665 31734705 3'utr ttk FlyBase G35827.1 AATATTAATTCTAACACTTGCTCCGTCCAGAACGCCTTTTT 26 31734684 0.672753714 6 23 155 0.842105263 1.204119983 0.157894737 0.346153846 0.552631579 26 5 1 32 3R:31734665-31734705 8 31.5 3867 FBgn0003870 1332.35 36.30666667 55.43333333 0.023642436 0.867609254 0.56825015 2 2 2 0.1 dme-miR-995-5p 6mer3-8 AATTCG 3R 31734813 31734818 + 3R_31734813_31734818_+ 0.60907966 0.584337668 0.596708664 0.017495236 ttk FBtr0085827|FBtr0303227|FBtr0085825|FBtr0085829 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 3R + 31734767 31734904 3'utr ttk FlyBase G47493.1 TGAGCAGTTCAGTGAACTTTAATGACTTTCGGCTTTAATTATAAACAATTCGACTGGCCGCTTACTGGATCCGCACACGATCCGTAAGGCAAGCAACTTTAGAACTTTTCATTTCTCTTTGTGATTTTGTTAAACCTT 57 31734816 0.944035694 18 54 533 0.956521739 1.819543936 0.289855072 0.210526316 0.347826087 57 3 0 66 3R:31734767-31734904 6 ttk FBtr0085825|FBtr0085829|FBtr0303227|FBtr0085827 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 AATTCG 6mer3-8 dme-miR-995-5p 3R + 31734764 31734841 3'utr ttk FlyBase G35828.1 AATTGAGCAGTTCAGTGAACTTTAATGACTTTCGGCTTTAATTATAAACAATTCGACTGGCCGCTTACTGGATCCGCA 25 31734816 0.980015146 11 23 162 0.951219512 1.591064607 0.097560976 0.48 0.682926829 25 2 0 39 3R:31734764-31734841 6 15.5 3868 FBgn0003870 1332.35 36.30666667 55.43333333 0.01163358 0.42691884 0.279615153 -3 -3 -3 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3R 31734886 31734892 + 3R_31734886_31734892_+ 0.521223709 0.521223855 0.521223782 1.41E-07 ttk FBtr0085827|FBtr0303227|FBtr0085825|FBtr0085829 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 3R + 31734767 31734904 3'utr ttk FlyBase G47493.1 TGAGCAGTTCAGTGAACTTTAATGACTTTCGGCTTTAATTATAAACAATTCGACTGGCCGCTTACTGGATCCGCACACGATCCGTAAGGCAAGCAACTTTAGAACTTTTCATTTCTCTTTGTGATTTTGTTAAACCTT 57 31734892 0.944035694 18 54 533 0.956521739 1.819543936 0.289855072 0.210526316 0.347826087 57 3 0 66 3R:31734767-31734904 7 ttk FBtr0085825|FBtr0085829|FBtr0303227|FBtr0085827 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 31734873 31734901 3'utr ttk FlyBase G35829.1 TTTCATTTCTCTTTGTGATTTTGTTAAAC 13 31734892 0.61239851 6 13 166 1 1.204119983 0.25 0.230769231 0.375 13 0 0 16 3R:31734873-31734901 7 16.5 3869 FBgn0003870 1332.35 36.30666667 55.43333333 0.012384133 0.45446199 0.297654841 -6 -6 -6 0.1 dme-miR-14-3p 6mer3-8 AAGACT 3R 31735290 31735295 + 3R_31735290_31735295_+ 0.999998559 0.999999996 0.999999277 9.90E-07 ttk FBtr0085827|FBtr0303227|FBtr0085825|FBtr0085829 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 3R + 31735271 31735310 3'utr ttk FlyBase G47496.1 AACGCAACAAATACGACTTAAGACTTGTGCGCTCAATGAC 15 31735298 0.948357808 6 14 71 0.954545455 1.322219295 0.090909091 0.266666667 0.5 15 1 0 21 3R:31735271-31735310 6 ttk FBtr0085825|FBtr0085829|FBtr0303227|FBtr0085827 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 AAGACT 6mer3-8 dme-miR-14-3p 3R + 31735253 31735314 3'utr ttk FlyBase G35831.1 GATTTTTACAGTTTACTTAACGCAACAAATACGACTTAAGACTTGTGCGCTCAATGACTAGA 15 31735297 0.972504993 6 13 67 0.947368421 1.255272505 0.157894737 0.214285714 0.421052632 14 1 0 18 3R:31735253-31735314 6 13.5 3870 FBgn0003870 1332.35 36.30666667 55.43333333 0.010132473 0.371832538 0.243535779 -8 -7 -7.5 0.1 dme-miR-278-3p 8mer-A1 CCCACCGA 3R 31750719 31750726 + 3R_31750719_31750726_+ 0.678004647 0.677973928 0.677989287 2.17E-05 CG1910 FBtr0085840|FBtr0085839|FBtr0085841 31750711|31750711|31750711 31751894|31751894|31751894 3R + 31750699 31750755 stop_codon CG1910 FlyBase G47529.1 AAGTGTGTAACTAAACCAATCCCACCGATGGACAATCAACAACTTTAATGCGTTGCA 37 31750727 0.748846817 7 34 139 0.926829268 1.102662342 0.243902439 0.108108108 0.195121951 37 1 2 38 3R:31750699-31750755 8 CG1910 FBtr0085841|FBtr0085840|FBtr0085839 31750711|31750711|31750711 31751894|31751894|31751894 CCCACCGA 8mer-A1 dme-miR-278-3p 3R + 31750700 31750743 stop_codon CG1910 FlyBase G35853.2 AGTGTGTAACTAAACCAATCCCACCGATGGACAATCAACAACTT 19 31750718 0.842783658 4 18 48 1 1.505149978 0.15625 0.473684211 0.6875 19 0 0 32 3R:31750700-31750743 8 25.5 3871 FBgn0022349 2973.373333 120.6666667 184.89 0.008576118 0.211325967 0.137919844 -8 1 -3.5 0.1 dme-miR-92b-3p 6mer2-7 TGCAAT 3R 31750956 31750961 + 3R_31750956_31750961_+ 0.981708911 0.999993917 0.990851414 0.012929447 CG1910 FBtr0085840|FBtr0085839|FBtr0085841 31750711|31750711|31750711 31751894|31751894|31751894 3R + 31750863 31751168 3'utr CG1910 FlyBase G47530.1 AATTGATAACTTGATTTCGTACTCCGAAATCCCTTAACTTTGATAATAGTTCGCGTCCTCCAGTATTTGGTTGACGCGAAGGACGCCATAGGCTGCAATCGATGCTGGACTTTCAATGCTGCGGTGTGTGCGTCAGCTGGACAGAAAAACAAAAAAAAAAAGTACCCTAAGACCCTCCCACCCACTCCCCCCGAAATGCACAGACAGATTGTAAAATGCATCTTAATATAATATGTATGTGGATAATTAATCAAATTGGAATCAAACAAATTATACATTAACGGAAAATGTATGTAAAATAGATGT 135 31750951 0.979370626 36 130 730 0.954545455 2.167317335 0.142857143 0.125925926 0.233766234 135 7 0 147 3R:31750863-31751168 6 CG1910 FBtr0085841|FBtr0085840|FBtr0085839 31750711|31750711|31750711 31751894|31751894|31751894 TGCAAT 6mer2-7 dme-miR-92b-3p 3R + 31750929 31750977 3'utr CG1910 FlyBase G35856.1 TTGGTTGACGCGAAGGACGCCATAGGCTGCAATCGATGCTGGACTTTCA 26 31750951 0.951057747 6 26 109 1 1.643452676 0.113636364 0.5 0.704545455 26 0 0 44 3R:31750929-31750977 6 39 3872 FBgn0022349 2973.373333 120.6666667 184.89 0.013116415 0.32320442 0.210936232 5 5 5 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 31775062 31775067 + 3R_31775062_31775067_+ 0.879764345 0.999996949 0.939880647 0.085017287 sip3 FBtr0330113 31774718 31775163 3R + 31775036 31775121 3'utr sip3 FlyBase G47544.1 TAAAAACTATTTTAGAGATGGGAAACTGATGATTTGTATTTAATATTACTATATGTGTATAATTAATGTGAAATATAATTAAAACG 32 31775068 0.808816397 14 30 255 0.914285714 1.505149978 0.257142857 0.09375 0.171428571 32 3 0 32 3R:31775036-31775121 6 sip3 FBtr0330113 31774718 31775163 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R + 31775037 31775111 3'utr sip3 FlyBase G35865.1 AAAAACTATTTTAGAGATGGGAAACTGATGATTTGTATTTAATATTACTATATGTGTATAATTAATGTGAAATAT 22 31775066 0.989861589 11 20 196 0.931034483 1.130333768 0.103448276 0.227272727 0.413793103 22 1 1 27 3R:31775037-31775111 6 20 3873 FBgn0039875 945.4166667 44.41666667 67.76 0.021154694 0.450281426 0.295159386 -6 -4 -5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 31790407 31790412 + 3R_31790407_31790412_+ 0.611769752 0.667626314 0.639698033 0.03949651 faf FBtr0307550 31789720 31790681 3R + 31790369 31790440 3'utr faf FlyBase G47598.1 CGAAACGAATCGGCTGATTGTAAGAATTAGGGCAAGAAACCAAATTGCATCTTTAGTACTCAGTACTCGCCT 31 31790414 0.7402301 6 26 133 0.916666667 1.51851394 0.027777778 0.161290323 0.277777778 31 3 0 33 3R:31790369-31790440 6 faf FBtr0307550 31789720 31790681 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 31790366 31790435 3'utr faf FlyBase G35909.1 AATCGAAACGAATCGGCTGATTGTAAGAATTAGGGCAAGAAACCAAATTGCATCTTTAGTACTCAGTACT 21 31790414 0.928868733 6 20 92 1 1.491361694 0.096774194 0.333333333 0.548387097 21 0 0 31 3R:31790366-31790435 6 16.5 3874 FBgn0005632 5381.21 66.68333333 101.8566667 0.003066225 0.24743814 0.161992342 -7 -7 -7 0.1 dme-bantam-3p 7mer-m8 TGATCTC 3R 31799548 31799554 + 3R_31799548_31799554_+ 0.661564649 0.66157015 0.6615674 3.89E-06 Acf1 FBtr0085845 31799537 31799799 3R + 31799516 31799578 stop_codon Acf1 FlyBase G47617.1 ACGGGGAAGTCAAAGCTTGCTGAGCCGGACGCTGATCTCCACCAGCTATCGTGTAAATTAGTT 59 31799548 0.898505178 6 59 247 1 1.86923172 0.135135135 0.186440678 0.351351351 59 0 0 74 3R:31799516-31799578 7 Acf1 FBtr0085845 31799537 31799799 TGATCTC 7mer-m8 dme-bantam-3p 3R + 31799511 31799568 stop_codon Acf1 FlyBase G35921.1 TATGAACGGGGAAGTCAAAGCTTGCTGAGCCGGACGCTGATCTCCACCAGCTATCGTG 31 31799548 0.942977895 4 28 114 0.909090909 1.301029996 0.159090909 0.258064516 0.477272727 31 3 1 40 3R:31799511-31799568 7 41 3875 FBgn0027620 2508.1 60.07666667 92.65666667 0.016347036 0.682461299 0.442493794 0 0 0 0.1 dme-miR-980-3p 6mer3-8 GGCAGC 3R 31851752 31851757 - 3R_31851752_31851757_- 0.999998786 0.999998973 0.999998879 1.41E-07 heph FBtr0300267|FBtr0300268|FBtr0300266|FBtr0346192|FBtr0300269|FBtr0300265|FBtr0085880|FBtr0112864|FBtr0085888|FBtr0112866|FBtr0085881|FBtr0085884|FBtr0085883|FBtr0112865|FBtr0085887|FBtr0085878|FBtr0300270|FBtr0085879|FBtr0300263|FBtr0300264|FBtr0306692|FBtr0085885|FBtr0085886|FBtr0306693|FBtr0085882 31851018|31851018|31851018|31851482|31846985|31851482|31851018|31850247|31851018|31846985|31850980|31851018|31851018|31851482|31851018|31851482|31851482|31851018|31850980|31851482|31851018|31851018|31851018|31851018|31851018 31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854 3R - 31851709 31851778 5'utr heph FlyBase G56121.1 AGCAACACCTTCAGATCCATTGGCAGCAACAAATACAAACTATAATCCGTAGTACAAGAAAAATGCACGC 58 31851758 0.931350159 3 56 207 0.971014493 1.525044807 0.043478261 0.172413793 0.304347826 58 1 1 67 3R:31851709-31851778 6 heph FBtr0085882|FBtr0085883|FBtr0306693|FBtr0300270|FBtr0085885|FBtr0306692|FBtr0300264|FBtr0300263|FBtr0085879|FBtr0085878|FBtr0085887|FBtr0085886|FBtr0112865|FBtr0085884|FBtr0300267|FBtr0085881|FBtr0112864|FBtr0300266|FBtr0300269|FBtr0085880|FBtr0346192|FBtr0300265|FBtr0112866|FBtr0085888|FBtr0300268 31851018|31851018|31851018|31851482|31851018|31851018|31851482|31850980|31851018|31851482|31851018|31851018|31851482|31851018|31851018|31850980|31850247|31851018|31846985|31851018|31851482|31851482|31846985|31851018|31851018 31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 31851740 31851777 5'utr heph FlyBase G42363.1 GCAACACCTTCAGATCCATTGGCAGCAACAAATACAAA 32 31851758 0.771111603 3 31 101 0.943396226 1.698970004 0.018867925 0.46875 0.679245283 32 3 0 50 3R:31851740-31851777 6 44 3876 FBgn0011224 1726 50.21 76.84333333 0.025492468 0.876319458 0.572593589 1 1 1 0.1 dme-miR-8-3p 7mer-m8 CAGTATT 3R 32045473 32045479 - 3R_32045473_32045479_- 0.661614288 0.661615178 0.661614733 6.36E-07 krz FBtr0085877 32045312 32049027 3R - 32045450 32045499 3'utr krz FlyBase G56126.1 TTTAATTTTTATATATTTGTCAGTATTGTTGCACCTCTTAGGTAGTAATT 20 32045481 0.782789772 5 18 244 0.904761905 1.278753601 0 0.05 0.095238095 20 2 0 19 3R:32045450-32045499 7 krz FBtr0085877 32045312 32049027 CAGTATT 7mer-m8 dme-miR-8-3p 3R - 32045449 32045496 3'utr krz FlyBase G42366.1 AATTTTTATATATTTGTCAGTATTGTTGCACCTCTTAGGTAGTAATTA 20 32045482 0.750792569 6 18 256 0.911764706 1.491361694 0 0.45 0.676470588 20 3 0 31 3R:32045449-32045496 7 19.5 3877 FBgn0040206 850.0433333 33.93333333 51.95666667 0.022940007 0.574656189 0.375312761 2 3 2.5 0.1 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3R 32046205 32046210 - 3R_32046205_32046210_- 0.519376072 0.542942568 0.53115932 0.016664032 krz FBtr0085877 32045312 32049027 3R - 32046186 32046226 3'utr krz FlyBase G56128.1 ATGGAGAAAGAACATTTTTGACTGACACGTTGGAGCTCCAT 9 32046210 0.646443106 4 9 64 1 1 0.1 0.111111111 0.2 9 0 0 10 3R:32046186-32046226 6 krz FBtr0085877 32045312 32049027 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3R - 32046108 32046229 3'utr krz FlyBase G42367.1 AATATGGAGAAAGAACATTTTTGACTGACACGTTGGAGCTCCATAAGAGAGGAAAAAAGAGTGGACTTTTGGAAAAGACTATGTTTGAAAAGCTTTAATATTGTATAATTAACAATGCATTG 20 32046210 0.961309543 11 19 151 0.964285714 1.431363764 0.285714286 0.3 0.5 20 1 0 27 3R:32046108-32046229 6 9.5 3878 FBgn0040206 850.0433333 33.93333333 51.95666667 0.011175901 0.279960707 0.182844678 0 0 0 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3R 32046688 32046694 - 3R_32046688_32046694_- 0.521223113 0.520951867 0.52108749 0.000191767 krz FBtr0085877 32045312 32049027 3R - 32046662 32046728 3'utr krz FlyBase G56130.1 ACTGTGAGTTACATGTTCTTATTTGTTAAAATGGTGTGATTTTTAAGAAGCTAAGATAACTTTTAAG 16 32046688 0.990882122 6 16 162 1 1.278753601 0.263157895 0.1875 0.315789474 16 0 0 19 3R:32046662-32046728 7 krz FBtr0085877 32045312 32049027 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 32046636 32046749 3'utr krz FlyBase G42368.1 TATGAGCAACATCACTTTTGTACTGTGAGTTACATGTTCTTATTTGTTAAAATGGTGTGATTTTTAAGAAGCTAAGATAACTTTTAAGATAAGTTGTAATGGTTTTGATAATAC 23 32046687 0.98952881 13 22 213 0.971428571 1.531478917 0.342857143 0.391304348 0.6 23 1 0 34 3R:32046636-32046749 7 14 3879 FBgn0040206 850.0433333 33.93333333 51.95666667 0.016469749 0.412573674 0.269455315 -6 -7 -6.5 0.1 dme-miR-12-5p 6mer2-7 ATACTC 3R 32047961 32047966 - 3R_32047961_32047966_- 0.999342046 0.999396696 0.999369371 3.87E-05 krz FBtr0085877 32045312 32049027 3R - 32047929 32047983 3'utr krz FlyBase G56134.1 TTGGGAACGAGAAAATGATACTCTGGTATATCAACTATACCGTTCTCTCTTGTAA 5 32047968 0.986891229 2 5 37 1 0.698970004 0.2 0 0 5 0 0 5 3R:32047929-32047983 6 krz FBtr0085877 32045312 32049027 ATACTC 6mer2-7 dme-miR-12-5p 3R - 32047954 32048000 3'utr krz FlyBase G42370.1 ATAGCTCTATCACTAGTTTGGGAACGAGAAAATGATACTCTGGTATA 5 32047968 0.962797288 3 5 30 1 0.84509804 0.571428571 0.2 0.428571429 5 0 0 7 3R:32047954-32048000 6 3.5 3880 FBgn0040206 850.0433333 33.93333333 51.95666667 0.004117437 0.103143418 0.067363829 2 2 2 0.1 dme-miR-184-3p 6mer3-8 TCCGTC 3R 32048094 32048099 - 3R_32048094_32048099_- 0.999998706 0.999999976 0.999999341 9.19E-07 krz FBtr0085877 32045312 32049027 3R - 32048080 32048116 3'utr krz FlyBase G56135.1 AAGTCGATCTGACCATTTCCGTCTGTCTGTATAAACG 8 32048100 0.757744421 2 8 59 1 1.079181246 0.083333333 0.375 0.583333333 8 0 0 12 3R:32048080-32048116 6 krz FBtr0085877 32045312 32049027 TCCGTC 6mer3-8 dme-miR-184-3p 3R - 32048088 32048109 3'utr krz FlyBase G42371.1 TCTGACCATTTCCGTCTGTCTG 6 32048100 0.696338536 2 6 44 1 0.954242509 0.111111111 0.5 0.666666667 6 0 0 9 3R:32048088-32048109 6 6.5 3881 FBgn0040206 850.0433333 33.93333333 51.95666667 0.007646669 0.191552063 0.125104254 1 1 1 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 32048592 32048597 - 3R_32048592_32048597_- 0.99998257 0.999997142 0.999989856 1.03E-05 krz FBtr0085877 32045312 32049027 3R - 32048575 32048614 3'utr krz FlyBase G56136.1 TCATTTACAAATTCTAATGATCTTTTTATTATGCCTCTTC 28 32048597 0.819447854 2 28 300 1 1.568201724 0 0.285714286 0.459459459 28 0 0 37 3R:32048575-32048614 6 krz FBtr0085877 32045312 32049027 TGATCT 6mer3-8 dme-bantam-3p 3R - 32048575 32048610 3'utr krz FlyBase G42372.1 TTACAAATTCTAATGATCTTTTTATTATGCCTCTTC 29 32048597 0.793438864 4 27 294 0.944444444 1.531478917 0 0.172413793 0.333333333 29 2 0 34 3R:32048575-32048610 6 28.5 3882 FBgn0040206 850.0433333 33.93333333 51.95666667 0.033527703 0.839882122 0.548534035 0 0 0 0.1 dme-miR-980-5p 7mer-m1 AAAAACT 3R 32056077 32056083 - 3R_32056077_32056083_- 0.559442278 0.603130738 0.581286508 0.030892364 Map205 FBtr0334299 32055277 32057321 3R - 32056034 32056113 3'utr Map205 FlyBase G56146.1 TATAATTTGTTGTTTATGCCACATGGATCAAAAAACTGAATGTATCTCCAGCACACTTATACGCTCTTTATTTGTCTGTT 81 32056073 0.810942382 9 78 439 0.9375 1.954242509 0.083333333 0.160493827 0.291666667 81 6 0 90 3R:32056034-32056113 7 Map205 FBtr0334299 32055277 32057321 AAAAACT 7mer-m1 dme-miR-980-5p 3R - 32056029 32056102 3'utr Map205 FlyBase G42381.1 GTTTATGCCACATGGATCAAAAAACTGAATGTATCTCCAGCACACTTATACGCTCTTTATTTGTCTGTTTAATA 61 32056073 0.943312205 10 60 327 0.988372093 1.929418926 0.104651163 0.37704918 0.558139535 61 1 0 85 3R:32056029-32056102 7 58.5 3883 FBgn0002645 6812.85 163.95 251.4733333 0.008586715 0.356816102 0.23262904 -10 -10 -10 0.1 dme-miR-14-3p 8mer-A1 AAGACTGA 3R 4241694 4241701 - 3R_4241694_4241701_- 0.643565454 0.64356539 0.643565422 7.07E-08 CG14642 FBtr0089688 4241043 4241883 3R - 4241688 4241712 5'utr CG14642 FlyBase G47748.1 CACGATTCTCTAAGACTGACGGAAT 7 4241704 0.610135787 3 7 29 1 1.041392685 0.636363636 0.285714286 0.545454545 7 0 0 11 3R:4241688-4241712 8 CG14642 FBtr0089688 4241043 4241883 AAGACTGA 8mer-A1 dme-miR-14-3p 3R - 4241663 4241714 5'utr CG14642 FlyBase G36027.1 AACACGATTCTCTAAGACTGACGGAATACGTTAGACCTGTCCGCCTGTGGGT 11 4241703 0.965671453 5 9 47 0.909090909 1 0.181818182 0.1 0.181818182 10 1 0 10 3R:4241663-4241714 8 8.5 3884 FBgn0037222 149 13.89666667 21.19333333 0.05704698 0.611657472 0.401069519 3 2 2.5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 4309853 4309858 - 3R_4309853_4309858_- 0.873130919 0.841808894 0.857469906 0.022147999 Vps24 FBtr0078958 4309645 4309972 3R - 4309830 4309878 3'utr Vps24 FlyBase G47754.1 GCCGTCATTTGATTGTAGAAACCAAAATAATCTCCAGAAACTTGAATTG 34 4309851 0.908767257 4 30 141 0.869565217 1.301029996 0.195652174 0.235294118 0.434782609 34 5 1 40 3R:4309830-4309878 6 Vps24 FBtr0078958 4309645 4309972 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 4309832 4309891 3'utr Vps24 FlyBase G36029.1 CGGCAACCCCCACGCCGTCATTTGATTGTAGAAACCAAAATAATCTCCAGAAACTTGAAT 23 4309851 0.91749943 2 21 72 0.96875 1.491361694 0.34375 0.347826087 0.53125 23 1 0 31 3R:4309832-4309891 6 27.5 3885 FBgn0037231 389.0533333 43.63 67.21 0.070684396 0.630300252 0.409165303 -7 -7 -7 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 3R 4309916 4309921 - 3R_4309916_4309921_- 0.989328139 0.989458209 0.989393174 9.20E-05 Vps24 FBtr0078958 4309645 4309972 3R - 4309900 4310158 stop_codon Vps24 FlyBase G47755.1 AAGGAGGTGGACAAGGTTTTGTGGGAGATCACAGATGGCAAGCTCGGGGAAGCTCCCCTGCCTCCAGAGGCTACACCGGCGGACAAGGCGTCTGCGTCTGCTGCGCGCGTCGAGGCTGAGCAGGACGATGAGGAGGGTGAGGAACTGCAAGAGATGCAAAGCCGCCTGGCCTCGCTGCGATCTTAAAACAACTGCTATGGGTATTTTATTTAGATTTGAAATTAAAGGCAAGTGATTTTGACTGGCAGACCTTATCAAA 70 4309922 0.927576483 28 68 373 0.962025316 1.278753601 0.265822785 0.128571429 0.227848101 70 0 3 76 3R:4309900-4310158 6 Vps24 FBtr0078958 4309645 4309972 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 4309902 4309948 3'utr Vps24 FlyBase G36030.1 TAGATTTGAAATTAAAGGCAAGTGATTTTGACTGGCAGACCTTATCA 27 4309922 0.602196842 7 25 171 1 1.568201724 0.081081081 0.307692308 0.513513514 26 0 0 37 3R:4309902-4309948 6 27 3886 FBgn0037231 389.0533333 43.63 67.21 0.069399225 0.618840248 0.401725934 1 1 1 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 4326194 4326199 + 3R_4326194_4326199_+ 0.999908723 0.999893354 0.999901038 1.08E-05 CG9795 FBtr0100617 4325834 4326379 3R + 4326176 4326255 3'utr CG9795 FlyBase G39927.1 GATTAACTAAGAAAACCTGTACCTATCGAAATGAACAAAAATCAAAATCTATATAGACGCAAAAAGCCTAGAATTTAAAT 119 4326193 0.925950816 5 119 426 1 2.193124598 0.153846154 0.260504202 0.435897436 119 0 0 156 3R:4326176-4326255 6 CG9795 FBtr0100617 4325834 4326379 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 4326170 4326270 3'utr CG9795 FlyBase G30160.1 GTGGATGATTAACTAAGAAAACCTGTACCTATCGAAATGAACAAAAATCAAAATCTATATAGACGCAAAAAGCCTAGAATTTAAATAATAATTAAGTAGGT 118 4326193 0.926434285 7 115 421 0.97515528 1.894869657 0.204968944 0.271186441 0.465838509 118 3 1 157 3R:4326170-4326270 6 108 3887 FBgn0037234 468.08 20.74666667 31.52333333 0.23072979 5.205655527 3.426033626 1 1 1 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 4381017 4381024 + 3R_4381017_4381024_+ 0.622091525 0.608126868 0.615109196 0.009874463 CG11739 FBtr0078916|FBtr0078914|FBtr0078915|FBtr0078913 4380946|4380946|4380946|4380946 4381210|4381210|4381210|4381210 3R + 4381004 4381072 3'utr CG11739 FlyBase G39945.1 TTATTTCCCTTCTTGCATTTATTGGCATTTTGCCTGTTGACTTCTGTTCGAAATACTCCTGATATTAGC 24 4381016 0.731158188 9 23 244 0.961538462 1.096910013 0.230769231 0.083333333 0.153846154 24 0 1 25 3R:4381004-4381072 8 CG11739 FBtr0078913|FBtr0078915|FBtr0078914|FBtr0078916 4380946|4380946|4380946|4380946 4381210|4381210|4381210|4381210 TGCATTTA 8mer-A1 dme-miR-277-3p 3R + 4380995 4381078 3'utr CG11739 FlyBase G30171.1 AGCAACTATTTATTTCCCTTCTTGCATTTATTGGCATTTTGCCTGTTGACTTCTGTTCGAAATACTCCTGATATTAGCCTGACC 17 4381016 0.995153955 4 14 189 0.857142857 1.380211242 0.107142857 0.411764706 0.642857143 17 4 0 24 3R:4380995-4381078 8 15.5 3888 FBgn0037239 393.3433333 36.01 54.94333333 0.039405778 0.43043599 0.282108839 1 1 1 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 4389455 4389461 + 3R_4389455_4389461_+ 0.658999391 0.658999426 0.658999409 0 tub FBtr0302338 4389383 4389813 3R + 4389432 4389478 3'utr tub FlyBase G39971.2 ATGCAACCCAGATGTATTCATTTGGCAGCTGGGTGTGGACCTTCTTA 321 4389454 0.790789293 8 314 2679 0.980769231 2.552668216 0.271978022 0.118380062 0.222527473 321 7 0 357 3R:4389432-4389478 7 tub FBtr0302338 4389383 4389813 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 4389382 4389496 stop_codon tub FlyBase G30187.1 TAGATAAAAGCACCGACCATCGGCGGAGATGACATTCCGTTCGATAACTTATGCAACCCAGATGTATTCATTTGGCAGCTGGGTGTGGACCTTCTTATGTTATGCATGAGGTCCA 242 4389453 0.986216904 15 234 1977 0.972826087 2.076761772 0.320652174 0.400826446 0.605978261 242 8 2 358 3R:4389382-4389496 7 274 3889 FBgn0003882 635 38.28 58.43666667 0.431496063 7.157784744 4.688836917 1 2 1.5 0.1 dme-miR-304-5p 7mer-A1 GAGATTA 3R 4391721 4391727 + 3R_4391721_4391727_+ 0.82334952 0.823349552 0.823349536 7.07E-08 CG14646 FBtr0078919|FBtr0302339 4391706|4391706 4392111|4391999 3R + 4391686 4391793 stop_codon CG14646 FlyBase G39980.2 AGATACTAATGACACCACGTGATTTATGACTGTTAGAGATTAAAGGACTCTTAAATCGAACCTGGTTCTTTATTGGTCTTATTTAAGTGTAATCATTTTCAATACAGT 387 4391718 0.985353884 12 377 3097 0.971800434 1.95230801 0.444685466 0.162790698 0.297180043 387 9 4 448 3R:4391686-4391793 7 CG14646 FBtr0302339|FBtr0078919 4391706|4391706 4391999|4392111 GAGATTA 7mer-A1 dme-miR-304-5p 3R + 4391686 4391779 stop_codon CG14646 FlyBase G30192.1 AGATACTAATGACACCACGTGATTTATGACTGTTAGAGATTAAAGGACTCTTAAATCGAACCTGGTTCTTTATTGGTCTTATTTAAGTGTAATC 340 4391718 0.726478229 16 329 2643 0.976608187 2.222716471 0.442495127 0.361764706 0.576998051 340 10 2 501 3R:4391686-4391779 7 310.5 3890 FBgn0037241 543.83 41.31666667 62.96 0.570950481 7.515127067 4.931702668 3 3 3 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 4391914 4391919 + 3R_4391914_4391919_+ 0.606958613 0.769383074 0.688170844 0.114851465 CG14646 FBtr0078919|FBtr0302339 4391706|4391706 4392111|4391999 3R + 4391853 4391997 3'utr CG14646 FlyBase G39981.1 CACTTTTTAATACTTTAACAATCTAAGCAATCCTAATATTTTTATTTTACTTAAGTACAATTGATCTAAGCATAGACAGAAAGAGTGTTCATATGAGAAATATGCCTTAATATGCTCTGCATAGGAAACCTGTAGTGCAATAAGT 66 4391914 0.979407576 17 66 464 1 1.886490725 0.311688312 0.151515152 0.272727273 66 0 0 77 3R:4391853-4391997 6 CG14646 FBtr0302339|FBtr0078919 4391706|4391706 4391999|4392111 TGATCT 6mer3-8 dme-bantam-3p 3R + 4391896 4391977 3'utr CG14646 FlyBase G30193.1 ATTTTACTTAAGTACAATTGATCTAAGCATAGACAGAAAGAGTGTTCATATGAGAAATATGCCTTAATATGCTCTGCATAGG 29 4391914 0.822069698 10 29 176 1 1.681241237 0.229166667 0.586206897 0.75 29 0 0 48 3R:4391896-4391977 6 21 3891 FBgn0037241 543.83 41.31666667 62.96 0.038615008 0.508269463 0.333545108 0 0 0 0.1 dme-miR-31a-5p 6mer3-8 TCTTGC 3R 4396297 4396302 - 3R_4396297_4396302_- 1 0.554059135 0.777029567 0.315327834 CG9855 FBtr0339552|FBtr0078950 4395977|4396162 4396375|4396375 3R - 4396269 4396308 3'utr CG9855 FlyBase G47790.1 TTTACCTCTTGCACTTTCAAGACGCTCACATCACCACCTA 6 4396298 0.880053025 3 5 36 0.833333333 0.698970004 0.166666667 0 0 6 1 0 5 3R:4396269-4396308 6 CG9855 FBtr0339552|FBtr0078950 4395977|4396162 4396375|4396375 TCTTGC 6mer3-8 dme-miR-31a-5p 3R - 4396229 4396336 3'utr CG9855 FlyBase G36053.1 GAGTTATGGTTTGTTTTAAGTTAATTGTTTTACCTCTTGCACTTTCAAGACGCTCACATCACCACCTAATTTAGGTGGACAAAAATTTTTAATTGTCTGCAGATAACA 11 4396299 0.985564542 7 11 93 1 1.176091259 0.2 0.363636364 0.533333333 11 0 0 15 3R:4396229-4396336 6 4 3892 FBgn0037242 314.87 22.8 34.92 0.012703655 0.175438596 0.114547537 -4 -3 -3.5 0.1 dme-miR-965-3p 6mer2-7 ACGCTT 3R 4406576 4406581 + 3R_4406576_4406581_+ 0.819558083 0.842013754 0.830785919 0.015878578 lost FBtr0078921 4406254 4407182 3R + 4406556 4406604 3'utr lost FlyBase G40000.1 AACGAGAACACAAATCATTGACGCTTTTTCTAAACAATTGCATTTGTTT 19 4406574 0.986775884 5 18 154 0.958333333 1.361727836 0 0.210526316 0.375 19 1 0 23 3R:4406556-4406604 6 lost FBtr0078921 4406254 4407182 ACGCTT 6mer2-7 dme-miR-965-3p 3R + 4406558 4406605 3'utr lost FlyBase G30215.1 CGAGAACACAAATCATTGACGCTTTTTCTAAACAATTGCATTTGTTTT 18 4406574 0.941683695 7 16 153 0.888888889 1.380211242 0 0.388888889 0.592592593 18 3 0 24 3R:4406558-4406605 6 15 3893 FBgn0263594 9369.39 424.1766667 652.24 0.001600958 0.035362624 0.02299767 2 2 2 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 4423176 4423182 - 3R_4423176_4423182_- 0.78415855 0.782567623 0.783363086 0.001124936 srl FBtr0301244|FBtr0301244|FBtr0301244|FBtr0078946|FBtr0078946|FBtr0078946|FBtr0336458|FBtr0336458|FBtr0336458 4422886|4422886|4422886|4422481|4422481|4422481|4422886|4422886|4422886 4423464|4423464|4423464|4423464|4423464|4423464|4423464|4423464|4423464 3R - 4423135 4423300 3'utr srl FlyBase G47814.1 CTTAAAATAGTTGACAGAGCTATACAATGCAAGCAATAAAAACATTGCAATGTACATTAGGATAATTGTAATTACCGTGAAGGAAACCTAACAACAAGAATTGAAAAGAAAATGAAATTGTGATAACCGCGTAATGCATACAAAGTCATTTAAAGCACGTAAGTTA 223 4423183 0.960075895 21 210 1122 0.945525292 1.431363764 0.186770428 0.139013453 0.252918288 223 6 8 243 3R:4423135-4423300 7 srl FBtr0336458|FBtr0336458|FBtr0336458|FBtr0301244|FBtr0301244|FBtr0301244|FBtr0078946|FBtr0078946|FBtr0078946 4422886|4422886|4422886|4422886|4422886|4422886|4422481|4422481|4422481 4423464|4423464|4423464|4423464|4423464|4423464|4423464|4423464|4423464 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 4423154 4423357 3'utr srl FlyBase G36072.1 AATTTCCGAAGTCTCTATCTATAAACCTGAGAAGCCTGATTACAATTCTTAATTTATCTTAAAATAGTTGACAGAGCTATACAATGCAAGCAATAAAAACATTGCAATGTACATTAGGATAATTGTAATTACCGTGAAGGAAACCTAACAACAAGAATTGAAAAGAAAATGAAATTGTGATAACCGCGTAATGCATACAAAGTC 169 4423183 0.829477446 19 157 848 0.95 1.915575699 0.157692308 0.426035503 0.626923077 169 11 2 247 3R:4423154-4423357 7 136.5 3894 FBgn0037248 2796.273333 78.52666667 121.16 0.04881497 1.73826301 1.126609442 1 1 1 0.1 dme-miR-79-3p 6mer2-7 AGCTTT 3R 4465433 4465438 - 3R_4465433_4465438_- 0.999924968 0.999948796 0.999936882 1.68E-05 CG31523 FBtr0078938|FBtr0078935|FBtr0335430|FBtr0335429|FBtr0078937|FBtr0345142|FBtr0078936 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 3R - 4465419 4465571 3'utr CG31523 FlyBase G47867.1 TCAGCGCAGTGAGAAGTATTGGTGACAAATTATTTGTAAGTGTAATTCTGTCTGTTAATCCGTGCGTATGGTTTCGTTGTTAGATTATGTGGCTTAAGCTGACAAGTTCAAAAACTATAGAAAACCTAAATAAAGCTTTTTAATTTATATTAA 58 4465432 0.984281754 19 56 448 0.970588235 1.819543936 0.205882353 0.155172414 0.279411765 58 2 0 66 3R:4465419-4465571 6 CG31523 FBtr0335429|FBtr0335430|FBtr0078935|FBtr0078938|FBtr0078936|FBtr0345142|FBtr0078937 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 AGCTTT 6mer2-7 dme-miR-79-3p 3R - 4465418 4465571 3'utr CG31523 FlyBase G36112.1 TCAGCGCAGTGAGAAGTATTGGTGACAAATTATTTGTAAGTGTAATTCTGTCTGTTAATCCGTGCGTATGGTTTCGTTGTTAGATTATGTGGCTTAAGCTGACAAGTTCAAAAACTATAGAAAACCTAAATAAAGCTTTTTAATTTATATTAAA 39 4465432 0.987187196 17 35 313 0.951612903 1.469822016 0.193548387 0.384615385 0.612903226 39 2 1 59 3R:4465418-4465571 6 16.5 3895 FBgn0051523 3326.983333 148.2633333 227.5733333 0.004959448 0.111288473 0.072504101 -6 -6 -6 0.1 dme-miR-79-3p 6mer2-7 AGCTTT 3R 4465781 4465786 - 3R_4465781_4465786_- 0.999992834 0.747434108 0.873713471 0.178585969 CG31523 FBtr0078938|FBtr0078935|FBtr0335430|FBtr0335429|FBtr0078937|FBtr0345142|FBtr0078936 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 3R - 4465750 4465802 3'utr CG31523 FlyBase G47868.1 AAGATCATGGAGATAAAGCTTTTATACTGTAAGTGCAAACCGGCTTAAGGACG 8 4465781 0.982255773 5 8 62 1 0.903089987 0.25 0 0 8 0 0 8 3R:4465750-4465802 6 CG31523 FBtr0335429|FBtr0335430|FBtr0078935|FBtr0078938|FBtr0078936|FBtr0345142|FBtr0078937 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 AGCTTT 6mer2-7 dme-miR-79-3p 3R - 4465745 4465812 3'utr CG31523 FlyBase G36113.1 AAGAGTGACAAAGATCATGGAGATAAAGCTTTTATACTGTAAGTGCAAACCGGCTTAAGGACGAAGAC 8 4465773 0.974210484 6 7 46 0.9 0.954242509 0.2 0.25 0.4 8 1 0 9 3R:4465745-4465812 6 6 3896 FBgn0051523 3326.983333 148.2633333 227.5733333 0.001803436 0.040468536 0.026365128 -5 -13 -9 0.1 dme-miR-92b-3p 7mer-A1 TGCAATA 3R 4465969 4465975 - 3R_4465969_4465975_- 0.782855135 0.594368021 0.688611578 0.133280507 CG31523 FBtr0078938|FBtr0078935|FBtr0335430|FBtr0335429|FBtr0078937|FBtr0345142|FBtr0078936 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 3R - 4465947 4466000 3'utr CG31523 FlyBase G47870.1 ATATTGAGAGAGAACGGCATTTTGTTGCAATACTTTGTAAAGGTCTAATAGTTA 14 4465979 0.985731281 7 13 105 0.9375 1.176091259 0.1875 0.071428571 0.1875 14 1 0 15 3R:4465947-4466000 7 CG31523 FBtr0335429|FBtr0335430|FBtr0078935|FBtr0078938|FBtr0078936|FBtr0345142|FBtr0078937 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 TGCAATA 7mer-A1 dme-miR-92b-3p 3R - 4465958 4466004 3'utr CG31523 FlyBase G36115.1 TTGTATATTGAGAGAGAACGGCATTTTGTTGCAATACTTTGTAAAGG 5 4465980 0.966410597 3 5 33 1 0.84509804 0 0.2 0.428571429 5 0 0 7 3R:4465958-4466004 7 6.5 3897 FBgn0051523 3326.983333 148.2633333 227.5733333 0.001953722 0.043840914 0.028562222 4 5 4.5 0.1 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA 3R 4466612 4466619 - 3R_4466612_4466619_- 0.627002929 0.627004112 0.627003521 8.49E-07 CG31523 FBtr0078938|FBtr0078935|FBtr0335430|FBtr0335429|FBtr0078937|FBtr0345142|FBtr0078936 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 3R - 4466553 4466817 stop_codon CG31523 FlyBase G47873.1 AAGCAAGGGGCAATCGAATGGTGCCTACAAGGAGGGCTTCTTCAAGGAGGGCGTGTTATCCAACAACGATGCCATCTTCAACCCGGACAGCAGTAGTTCTAGTCTGCACCAGCGCAAAGTCAAATAACTGCTGATTAGGTGTACTACGATGATATTCATTATGTTTATGTTAAGTGATTAGCGTGTAACTGAACCAGATTGAAGAACAAGACGAGCAAGAAACTTGGCAGAAGTAGCAGAAGACGATTGGCACGACAGCAGCGAA 410 4466619 0.96314446 35 384 1963 0.936440678 1.800324229 0.177966102 0.136585366 0.25 410 24 6 442 3R:4466553-4466817 8 CG31523 FBtr0335429|FBtr0335430|FBtr0078935|FBtr0078938|FBtr0078936|FBtr0345142|FBtr0078937 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p 3R - 4466554 4466756 stop_codon CG31523 FlyBase G36118.1 AACAACGATGCCATCTTCAACCCGGACAGCAGTAGTTCTAGTCTGCACCAGCGCAAAGTCAAATAACTGCTGATTAGGTGTACTACGATGATATTCATTATGTTTATGTTAAGTGATTAGCGTGTAACTGAACCAGATTGAAGAACAAGACGAGCAAGAAACTTGGCAGAAGTAGCAGAAGACGATTGGCACGACAGCAGCGA 267 4466619 0.961991588 27 239 1210 0.894484412 1.45776548 0.189448441 0.4082397 0.621103118 267 32 12 373 3R:4466554-4466756 8 96 3898 FBgn0051523 3326.983333 148.2633333 227.5733333 0.028854969 0.647496571 0.421842044 0 0 0 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 4492581 4492586 - 3R_4492581_4492586_- 0.999999756 0.999999943 0.99999985 7.07E-08 CG34357 FBtr0303867|FBtr0335239 4492524|4491941 4493403|4493403 3R - 4492568 4492602 3'utr CG34357 FlyBase G47888.1 GACATGGGTAGATTGCTGATCTTAATAAAATATTA 23 4492587 0.724694815 5 22 184 0.962962963 1.113943352 0.37037037 0.173913043 0.296296296 23 0 1 26 3R:4492568-4492602 6 CG34357 FBtr0335239|FBtr0303867 4491941|4492524 4493403|4493403 TGATCT 6mer3-8 dme-bantam-3p 3R - 4492562 4492609 3'utr CG34357 FlyBase G36129.1 GGCTGACGACATGGGTAGATTGCTGATCTTAATAAAATATTATTATTT 14 4492587 0.985948719 6 13 111 0.947368421 1.255272505 0.473684211 0.285714286 0.473684211 14 1 0 18 3R:4492562-4492609 6 18.5 3899 FBgn0085386 22.73666667 0.763333333 1.17 0.813663686 24.23580786 15.81196581 1 1 1 0.1 dme-miR-8-3p 6mer3-8 CAGTAT 3R 4638351 4638356 - 3R_4638351_4638356_- 0.999999999 1 1 0 CG9775 FBtr0301297 4638008 4638430 3R - 4638310 4638388 stop_codon CG9775 FlyBase G47907.1 TTAAGCGCGAGGATCTTGACATGGAACTGGATCAGTATATGTCCACCACTAAGTCGGAGATGGACTACTTGCTGAAGTA 25 4638357 0.964787478 9 23 142 0.928571429 1.414973348 0.142857143 0.04 0.142857143 25 2 0 26 3R:4638310-4638388 6 CG9775 FBtr0301297 4638008 4638430 CAGTAT 6mer3-8 dme-miR-8-3p 3R - 4638312 4638385 3'utr CG9775 FlyBase G36142.1 AGCGCGAGGATCTTGACATGGAACTGGATCAGTATATGTCCACCACTAAGTCGGAGATGGACTACTTGCTGAAG 16 4638357 0.922163559 5 14 90 0.95 1.278753601 0.15 0.25 0.4 16 1 0 19 3R:4638312-4638385 6 13.5 3900 FBgn0037261 1038.666667 62.08666667 94.64333333 0.012997433 0.21743799 0.142640792 1 1 1 0.1 dme-miR-12-5p 6mer3-8 AATACT 3R 4644659 4644664 - 3R_4644659_4644664_- 0.999955129 0.953061878 0.976508504 0.0331585 Dip2 FBtr0078893 4644647 4644783 3R - 4644644 4644677 3'utr Dip2 FlyBase G47914.1 TACTTGGAGAATAAATACTGATAAATATTAATTA 29 4644665 0.881629115 4 27 216 0.939393939 1.491361694 0.272727273 0.137931034 0.242424242 29 2 0 31 3R:4644644-4644677 6 Dip2 FBtr0078893 4644647 4644783 AATACT 6mer3-8 dme-miR-12-5p 3R - 4644644 4644684 3'utr Dip2 FlyBase G36147.1 TTTATTATACTTGGAGAATAAATACTGATAAATATTAATTA 10 4644664 0.754319206 4 9 74 0.875 1.146128036 0.5 0.5 0.6875 10 2 0 14 3R:4644644-4644684 6 19.5 3901 FBgn0040466 185 25.7 39.05333333 0.105405405 0.758754864 0.499317173 1 0 0.5 0.1 dme-miR-1006-3p 6mer3-8 CGAATT 3R 4644708 4644713 - 3R_4644708_4644713_- 0.505557739 0.505436299 0.505497019 8.58E-05 Dip2 FBtr0078893 4644647 4644783 3R - 4644681 4644726 3'utr Dip2 FlyBase G47915.1 TAAAAGCACCTGACGAATTGGGAAACAAACCTAATAATTTATTTTA 28 4644709 0.743928047 4 27 102 1 1.477121255 0 0.035714286 0.1 28 0 0 30 3R:4644681-4644726 6 Dip2 FBtr0078893 4644647 4644783 CGAATT 6mer3-8 dme-miR-1006-3p 3R - 4644689 4644726 3'utr Dip2 FlyBase G36148.1 TAAAAGCACCTGACGAATTGGGAAACAAACCTAATAAT 15 4644709 0.7226334 2 14 47 0.92 0.884606581 0 0.466666667 0.68 15 0 2 23 3R:4644689-4644726 6 21 3902 FBgn0040466 185 25.7 39.05333333 0.113513514 0.817120623 0.537726186 -4 -4 -4 0.1 dme-miR-980-5p 8mer-m1 GAAAAACT 3R 4786579 4786586 - 3R_4786579_4786586_- 0.607906079 0.607839039 0.607872559 4.74E-05 ctrip FBtr0334903|FBtr0334902|FBtr0344029 4786282|4786282|4786282 4787826|4787826|4787826 3R - 4786548 4786721 3'utr ctrip FlyBase G47947.1 TGTATAACTTCTATTGTACTTGATGCATACGCATACGAAAGAGAACAGAATGCTGGTAATAAAAATTGATTAACATTTAAACCGAGAAGCGAAATCGATCTTACATTAAAACTAGATACAAATCTTTGCAGTACTGAAAAACTGATTACAGACATGTGGTATATATACATATAA 56 4786576 0.975718129 22 52 323 0.943661972 1.525044807 0.183098592 0.178571429 0.352112676 56 3 1 67 3R:4786548-4786721 8 ctrip FBtr0344029|FBtr0334902|FBtr0334903 4786282|4786282|4786282 4787826|4787826|4787826 GAAAAACT 8mer-m1 dme-miR-980-5p 3R - 4786545 4786602 3'utr ctrip FlyBase G36173.1 AAATCTTTGCAGTACTGAAAAACTGATTACAGACATGTGGTATATATACATATAACTT 21 4786577 0.779210138 9 20 149 0.96875 1.190331698 0 0.380952381 0.59375 21 0 1 31 3R:4786545-4786602 8 20.5 3903 FBgn0260794 5155.516667 58.3 89.56666667 0.003976323 0.351629503 0.228879792 -10 -9 -9.5 0.1 dme-miR-1008-3p 7mer-m8 AGCTGTG 3R 4786937 4786943 - 3R_4786937_4786943_- 0.598734588 0.64495573 0.621845159 0.032683253 ctrip FBtr0334903|FBtr0334902|FBtr0344029 4786282|4786282|4786282 4787826|4787826|4787826 3R - 4786923 4786998 3'utr ctrip FlyBase G47949.1 AAAACGTAATTATCTATCTTGCAAGTCTAAGAGAAAATTTAATGCAAATTTTGCAAGCTGTGTTACATAAAGAAAC 21 4786936 0.812928463 10 20 161 0.956521739 1.041392685 0 0.095238095 0.173913043 21 0 1 22 3R:4786923-4786998 7 ctrip FBtr0344029|FBtr0334902|FBtr0334903 4786282|4786282|4786282 4787826|4787826|4787826 AGCTGTG 7mer-m8 dme-miR-1008-3p 3R - 4786925 4786959 3'utr ctrip FlyBase G36177.1 TAATGCAAATTTTGCAAGCTGTGTTACATAAAGAA 9 4786936 0.668053539 5 9 70 1 1.146128036 0 0.333333333 0.571428571 9 0 0 14 3R:4786925-4786959 7 12.5 3904 FBgn0260794 5155.516667 58.3 89.56666667 0.002424587 0.214408233 0.139560849 -7 -7 -7 0.1 dme-miR-965-3p 7mer-A1 ACGCTTA 3R 4787182 4787188 - 3R_4787182_4787188_- 0.823348779 0.823349059 0.823348919 2.12E-07 ctrip FBtr0301437|FBtr0303914|FBtr0344030|FBtr0334903|FBtr0303911|FBtr0303917|FBtr0303915|FBtr0303912|FBtr0334902|FBtr0344028|FBtr0344029 4787043|4787043|4787043|4786282|4787043|4787043|4787043|4787043|4786282|4787043|4786282 4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826 3R - 4787125 4787217 3'utr ctrip FlyBase G47951.1 AATTATTTGTAAGCATACAATGTGCATAAACGCTTATTAGAAAGAAACGTGAATGAAAATACAATGAAGGGGAAACACTGAAGCATTGGAGGT 125 4787181 0.892332085 13 119 664 0.972789116 2.155336037 0.142857143 0.152 0.278911565 125 4 0 143 3R:4787125-4787217 7 ctrip FBtr0344029|FBtr0344028|FBtr0334902|FBtr0303915|FBtr0303912|FBtr0303917|FBtr0303911|FBtr0334903|FBtr0344030|FBtr0303914|FBtr0301437 4786282|4787043|4786282|4787043|4787043|4787043|4787043|4786282|4787043|4787043|4787043 4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826 ACGCTTA 7mer-A1 dme-miR-965-3p 3R - 4787126 4787207 3'utr ctrip FlyBase G36179.1 AAGCATACAATGTGCATAAACGCTTATTAGAAAGAAACGTGAATGAAAATACAATGAAGGGGAAACACTGAAGCATTGGAGG 76 4787181 0.889613743 8 71 391 0.943396226 2 0.20754717 0.355263158 0.537735849 76 6 0 100 3R:4787126-4787207 7 77.5 3905 FBgn0260794 5155.516667 58.3 89.56666667 0.015032441 1.329331046 0.865277261 -7 -7 -7 0.1 dme-miR-277-3p 6mer3-8 TGCATT 3R 4787366 4787371 - 3R_4787366_4787371_- 0.814311833 0.998219871 0.906265852 0.130042665 ctrip FBtr0301437|FBtr0303914|FBtr0344030|FBtr0334903|FBtr0303911|FBtr0303917|FBtr0303915|FBtr0303912|FBtr0334902|FBtr0344028|FBtr0344029 4787043|4787043|4787043|4786282|4787043|4787043|4787043|4787043|4786282|4787043|4786282 4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826 3R - 4787285 4787406 3'utr ctrip FlyBase G47952.1 AACGCACAAAGCGGTATATTTGTCGATTAGGGCTTTGCATTCGTTCTAGTTAAATTTGTTTAGTTTGCTTTTCCCATTCTTATTATCCTCAAGCAAATTCTAACTCATATTATTCATAATCA 27 4787363 0.989709444 9 25 251 0.96969697 1.204119983 0.212121212 0.185185185 0.333333333 27 0 1 32 3R:4787285-4787406 6 ctrip FBtr0344029|FBtr0344028|FBtr0334902|FBtr0303915|FBtr0303912|FBtr0303917|FBtr0303911|FBtr0334903|FBtr0344030|FBtr0303914|FBtr0301437 4786282|4787043|4786282|4787043|4787043|4787043|4787043|4786282|4787043|4787043|4787043 4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826 TGCATT 6mer3-8 dme-miR-277-3p 3R - 4787351 4787388 3'utr ctrip FlyBase G36180.1 TTTGTCGATTAGGGCTTTGCATTCGTTCTAGTTAAATT 13 4787363 0.685260619 5 12 106 0.944444444 1.230448921 0.166666667 0.307692308 0.5 13 1 0 17 3R:4787351-4787388 6 12.5 3906 FBgn0260794 5155.516667 58.3 89.56666667 0.002424587 0.214408233 0.139560849 -8 -8 -8 0.1 dme-miR-92b-3p 7mer-A1 TGCAATA 3R 4815795 4815801 + 3R_4815795_4815801_+ 0.565485527 0.782905533 0.67419553 0.153739156 CG1129 FBtr0345174|FBtr0078871 4815686|4815686 4816025|4816025 3R + 4815706 4815856 3'utr CG1129 FlyBase G40103.1 AAATTGTAAATACAATCTATTTTTGTTCAGTTCCGCCGTTTCGGTATTCTATAAAGGTGCCTTTTGCTGAACTGCTCTCACCTACGATTTGCAATATTGACACTATGAAAAAAAAGAATAACATTTCCAGCAGTTAGCGTTGCTAACTATT 38 4815802 0.980896788 17 38 274 1 1.633468456 0.186046512 0.131578947 0.23255814 38 0 0 43 3R:4815706-4815856 7 CG1129 FBtr0345174|FBtr0078871 4815686|4815686 4816025|4816025 TGCAATA 7mer-A1 dme-miR-92b-3p 3R + 4815720 4815815 3'utr CG1129 FlyBase G30306.1 ATCTATTTTTGTTCAGTTCCGCCGTTTCGGTATTCTATAAAGGTGCCTTTTGCTGAACTGCTCTCACCTACGATTTGCAATATTGACACTATGAAA 38 4815802 0.736205866 12 36 279 0.948275862 1.740362689 0.189655172 0.447368421 0.637931034 38 3 0 55 3R:4815720-4815815 7 18.5 3907 FBgn0037279 833.0633333 60.27333333 92.65 0.022207195 0.306935074 0.199676201 -7 -7 -7 0.1 dme-miR-980-5p 8mer-m1 GAAAAACT 3R 4815895 4815902 + 3R_4815895_4815902_+ 0.522528623 0.50305772 0.512793171 0.013768005 CG1129 FBtr0345174|FBtr0078871 4815686|4815686 4816025|4816025 3R + 4815865 4815979 3'utr CG1129 FlyBase G40104.1 CCAGCTCTTTCTCCTTCCCTGGCGAAGGGGGAAAAACTGACTTATAGTTTAAGCTTAATCGCGTTAGTTGAACGTTTTTGTACTTTGATAAGCGAAGCATTAGTTATACTCCTAA 42 4815902 0.983709699 11 42 275 1 1.698970004 0.18 0.19047619 0.32 42 0 0 50 3R:4815865-4815979 8 CG1129 FBtr0345174|FBtr0078871 4815686|4815686 4816025|4816025 GAAAAACT 8mer-m1 dme-miR-980-5p 3R + 4815867 4815920 3'utr CG1129 FlyBase G30307.1 AGCTCTTTCTCCTTCCCTGGCGAAGGGGGAAAAACTGACTTATAGTTTAAGCTT 21 4815902 0.97513344 2 20 118 0.931034483 1.431363764 0.137931034 0.285714286 0.482758621 21 2 0 27 3R:4815867-4815920 8 25.5 3908 FBgn0037279 833.0633333 60.27333333 92.65 0.030609918 0.423072669 0.275229358 -7 -7 -7 0.1 dme-miR-8-3p 7mer-A1 AGTATTA 3R 4818685 4818691 - 3R_4818685_4818691_- 0.823027081 0.823335229 0.823181155 0.00021786 CG14657 FBtr0334901|FBtr0078875|FBtr0334900 4818273|4818539|4817978 4820262|4819106|4819106 3R - 4818665 4818712 3'utr CG14657 FlyBase G48022.1 TTTAACCCTCATTGAGCAAAAAGTATTAAATGTATAAAGAAACTAGTT 12 4818701 0.987402577 5 7 77 0.583333333 0.84509804 0.166666667 0 0 12 5 0 7 3R:4818665-4818712 7 CG14657 FBtr0334900|FBtr0078875|FBtr0334901 4817978|4818539|4818273 4819106|4819106|4820262 AGTATTA 7mer-A1 dme-miR-8-3p 3R - 4818675 4818739 3'utr CG14657 FlyBase G36239.1 GATACAAAATGATATATGCAAAAGAAATTTAACCCTCATTGAGCAAAAAGTATTAAATGTATAAA 7 4818701 0.967854345 6 7 43 1 1.041392685 0.454545455 0.428571429 0.636363636 7 0 0 11 3R:4818675-4818739 7 6.5 3909 FBgn0037282 892.63 37.31666667 57.47333333 0.007281853 0.174184904 0.113095929 10 10 10 0.1 dme-miR-14-3p 8mer-A1 AAGACTGA 3R 4818773 4818780 - 3R_4818773_4818780_- 0.639821759 0.636966802 0.638394281 0.00201879 CG14657 FBtr0334901|FBtr0078875|FBtr0334900 4818273|4818539|4817978 4820262|4819106|4819106 3R - 4818759 4818805 3'utr CG14657 FlyBase G48023.1 ATTACAGAATTCTGGCTTGGTCTTCAAGACTGATATAACAAAAAGCA 76 4818784 0.640526233 9 67 599 0.862068966 1.875061263 0.149425287 0.131578947 0.24137931 76 12 0 75 3R:4818759-4818805 8 CG14657 FBtr0334900|FBtr0078875|FBtr0334901 4817978|4818539|4818273 4819106|4819106|4820262 AAGACTGA 8mer-A1 dme-miR-14-3p 3R - 4818747 4818803 3'utr CG14657 FlyBase G36240.1 TACAGAATTCTGGCTTGGTCTTCAAGACTGATATAACAAAAAGCATCCGCTACGAAT 45 4818784 0.933472837 9 41 351 0.930555556 1.525044807 0.194444444 0.4 0.625 45 4 1 67 3R:4818747-4818803 8 56 3910 FBgn0037282 892.63 37.31666667 57.47333333 0.06273596 1.500669942 0.974364923 4 4 4 0.1 dme-miR-184-5p 6mer2-7 GATAAG 3R 4818915 4818920 - 3R_4818915_4818920_- 0.999947023 0.999995029 0.999971026 3.39E-05 CG14657 FBtr0334901|FBtr0078875|FBtr0334900 4818273|4818539|4817978 4820262|4819106|4819106 3R - 4818871 4818959 3'utr CG14657 FlyBase G48024.1 ACGTAATACATATTTCCGTTGAAGTAGGTGGAAATGTAAGATAAGCCAGTAATCATGTAAAGTACACGTAGTGTTCAACTCGTTTCGTA 31 4818925 0.959341189 5 30 138 0.972222222 1.544068044 0.277777778 0.129032258 0.25 31 1 0 35 3R:4818871-4818959 6 CG14657 FBtr0334900|FBtr0078875|FBtr0334901 4817978|4818539|4818273 4819106|4819106|4820262 GATAAG 6mer2-7 dme-miR-184-5p 3R - 4818906 4818947 3'utr CG14657 FlyBase G36241.3 TTTCCGTTGAAGTAGGTGGAAATGTAAGATAAGCCAGTAATC 23 4818924 0.820315852 6 23 104 1 1.544068044 0.257142857 0.434782609 0.628571429 23 0 0 35 3R:4818906-4818947 6 24 3911 FBgn0037282 892.63 37.31666667 57.47333333 0.02688684 0.643144261 0.417584967 5 4 4.5 0.1 dme-miR-14-3p 7mer-A1 AGACTGA 3R 4938248 4938254 + 3R_4938248_4938254_+ 0.823349562 0.823349562 0.823349562 0 Cdep FBtr0336812 4938074 4940218 3R + 4938232 4938258 3'utr Cdep FlyBase G40137.1 AACTTATTTGTAACTGAGACTGATTTA 6 4938243 0.694031952 4 6 52 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3R:4938232-4938258 7 Cdep FBtr0336812 4938074 4940218 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 4938237 4938267 3'utr Cdep FlyBase G30329.1 ATTTGTAACTGAGACTGATTTACGACTAACA 7 4938246 0.827758969 4 7 50 1 1.079181246 0 0.428571429 0.666666667 7 0 0 12 3R:4938237-4938267 7 6.5 3912 FBgn0265082 2047.223333 54.77333333 83.9 0.003175032 0.118670886 0.077473182 5 2 3.5 0.1 dme-miR-932-5p 6mer3-8 GGAATT 3R 4948834 4948839 - 3R_4948834_4948839_- 0.535686422 0.5630337 0.549360061 0.019337461 Ubc6 FBtr0078849 4948753 4950278 3R - 4948764 4948875 3'utr Ubc6 FlyBase G48033.1 CAAAGAATGAGGATTAGCAACCGATTCAGACAATGTGGAATTTCAAATTACCTTACTGTAATTAACATTATTATTATTAATAAAGTTAAGATTTCCAATATCAATAAATGAA 31 4948828 0.983629946 9 30 235 0.971428571 1.531478917 0.4 0.129032258 0.228571429 31 1 0 34 3R:4948764-4948875 6 Ubc6 FBtr0078849 4948753 4950278 GGAATT 6mer3-8 dme-miR-932-5p 3R - 4948812 4948867 3'utr Ubc6 FlyBase G36248.1 GAGGATTAGCAACCGATTCAGACAATGTGGAATTTCAAATTACCTTACTGTAATTA 15 4948828 0.802450014 5 14 103 1 1.301029996 0.45 0.266666667 0.45 15 0 0 20 3R:4948812-4948867 6 16 3913 FBgn0004436 1251.333333 113.3 174.1066667 0.012786361 0.141218005 0.091897687 -11 -11 -11 0.1 dme-miR-965-3p 6mer2-7 ACGCTT 3R 4949311 4949316 - 3R_4949311_4949316_- 0.975468864 0.997758661 0.986613763 0.015761269 Ubc6 FBtr0078849 4948753 4950278 3R - 4949305 4949330 3'utr Ubc6 FlyBase G48035.1 TTGGTGGCTGACCGACGCTTTACTTT 7 4949311 0.679543248 3 7 34 1 0.954242509 0.777777778 0.285714286 0.444444444 7 0 0 9 3R:4949305-4949330 6 Ubc6 FBtr0078849 4948753 4950278 ACGCTT 6mer2-7 dme-miR-965-3p 3R - 4949302 4949363 3'utr Ubc6 FlyBase G36252.1 TGACCAATGCTCTATGTATTTTGCCCGATAATTTTGGTGGCTGACCGACGCTTTACTTTTAC 11 4949311 0.775046964 6 9 76 0.923076923 0.77815125 0.307692308 0.181818182 0.307692308 11 0 1 12 3R:4949302-4949363 6 6 3914 FBgn0004436 1251.333333 113.3 174.1066667 0.004794885 0.052956752 0.034461633 -5 -5 -5 0.1 dme-miR-34-5p 7mer-A1 ACTGCCA 3R 5226951 5226957 + 3R_5226951_5226957_+ 0.816008101 0.81879282 0.81740046 0.00196908 Vps37B FBtr0078777|FBtr0305002 5226913|5226913 5227526|5227526 3R + 5226912 5226989 stop_codon Vps37B FlyBase G40174.1 TGAGGTCTTGGTCCTTGGTCCTTGGTCCTCAGCGAATTAACTGCCATGGCGCATCAGTCTGCAGCAGGCAAGTTTGTA 24 5226971 0.727038355 9 19 142 0.806451613 1.397940009 0.258064516 0.291666667 0.451612903 24 6 0 25 3R:5226912-5226989 7 Vps37B FBtr0078777|FBtr0305002|FBtr0305001 5226913|5226913|5226913 5227526|5227526|5227526 ACTGCCA 7mer-A1 dme-miR-34-5p 3R + 5226912 5226983 stop_codon Vps37B FlyBase G30347.1 TGAGGTCTTGGTCCTTGGTCCTTGGTCCTCAGCGAATTAACTGCCATGGCGCATCAGTCTGCAGCAGGCAAG 20 5226948 0.953393778 10 20 119 1 1.447158031 0.392857143 0.35 0.535714286 20 0 0 28 3R:5226912-5226983 7 12 3915 FBgn0037299 170.3333333 20.86666667 31.67333333 0.070450098 0.575079872 0.378867607 -20 3 -8.5 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 5227334 5227341 - 3R_5227334_5227341_- 0.500117404 0.500117737 0.50011757 2.12E-07 Kat60 FBtr0078827|FBtr0334909 5227287|5227287 5227991|5227991 3R - 5227314 5227441 3'utr Kat60 FlyBase G48076.1 ATATATCATAGTTTAGTGCAGGCAGAGATGTGTGTACCAGAAAGTTCCCTCTGATTTGCAATTAACCCACTGTAATCAGAAGATGAAACTGAAGCAATATGTACTTAAAGAGAGGATTCTGAAATTTT 473 5227342 0.729365226 20 464 2411 0.980251346 2.737192643 0.122082585 0.143763214 0.272890485 473 11 0 546 3R:5227314-5227441 8 Kat60 FBtr0334909|FBtr0078827 5227287|5227287 5227991|5227991 GTACTTAA 8mer-A1 dme-miR-252-5p 3R - 5227307 5227373 3'utr Kat60 FlyBase G36284.1 ACTGTAATCAGAAGATGAAACTGAAGCAATATGTACTTAAAGAGAGGATTCTGAAATTTTAAACAAT 314 5227342 0.728860425 11 300 1623 0.953333333 2.331427297 0.111111111 0.340764331 0.54 314 20 1 429 3R:5227307-5227373 8 359 3916 FBgn0040208 671.9533333 31.69333333 48.73 0.534263292 11.32730332 7.367124974 1 1 1 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 3R 5227448 5227453 + 3R_5227448_5227453_+ 0.944618449 0.999942827 0.972280638 0.039120258 Vps37B FBtr0078777|FBtr0305002 5226913|5226913 5227526|5227526 3R + 5227336 5227470 coding-3'utr Vps37B FlyBase G40176.1 AAGTACATATTGCTTCAGTTTCATCTTCTGATTACAGTGGGTTAATTGCAAATCAGAGGGAACTTTCTGGTACACACATCTCTGCCTGCACTAAACTATGATATATATGTATATGTGAAAGTATAAATTAAGCGA 56 5227446 0.984861482 18 53 424 0.953125 1.484299839 0.21875 0.107142857 0.21875 56 2 1 61 3R:5227336-5227470 6 Vps37B FBtr0078777|FBtr0305002|FBtr0305001 5226913|5226913|5226913 5227526|5227526|5227526 ATGTGA 6mer3-8 dme-miR-1003-3p 3R + 5227372 5227469 3'utr Vps37B FlyBase G30350.1 GTGGGTTAATTGCAAATCAGAGGGAACTTTCTGGTACACACATCTCTGCCTGCACTAAACTATGATATATATGTATATGTGAAAGTATAAATTAAGCG 41 5227447 0.987656272 13 33 295 0.810344828 1.371067862 0.413793103 0.365853659 0.551724138 41 10 1 47 3R:5227372-5227469 6 26.5 3917 FBgn0037299 170.3333333 20.86666667 31.67333333 0.155577299 1.269968051 0.836665965 2 1 1.5 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 3R 5236189 5236195 + 3R_5236189_5236195_+ 0.620194881 0.620204245 0.620199563 6.58E-06 Mms19 FBtr0078778 5236033 5236288 3R + 5236149 5236204 3'utr Mms19 FlyBase G40186.1 TTTGGAAAAAGCAAAATTATAAAGTAAACGCGAAATTGTATGCATTTTATATTACT 15 5236185 0.990857872 4 14 147 0.9375 1.176091259 0.0625 0.066666667 0.125 15 1 0 15 3R:5236149-5236204 7 Mms19 FBtr0078778 5236033 5236288 TGCATTT 7mer-m8 dme-miR-277-3p 3R + 5236160 5236200 3'utr Mms19 FlyBase G30357.1 CAAAATTATAAAGTAAACGCGAAATTGTATGCATTTTATAT 14 5236185 0.76767203 4 14 133 1 1.322219295 0 0.285714286 0.523809524 14 0 0 21 3R:5236160-5236200 7 14 3918 FBgn0037301 547.33 20.46333333 31.32 0.025578719 0.684150513 0.446998723 4 4 4 0.1 dme-miR-263a-5p 6mer2-7 TGCCAT 3R 5268059 5268064 + 3R_5268059_5268064_+ 0.833765296 0.679007502 0.756386399 0.10943029 Hph FBtr0334275|FBtr0344333 5267839|5267839 5268598|5269046 3R + 5267894 5268399 5'utr Hph FlyBase G40198.1 CAAACACACATGTATAAAGCTAGTTAAAAACTATTTATAGCTTCGGAGGGGCGGCAGCGCAAGCCCGCATTGCGAAAGTTAATCAAAGCTCCTTTAGTCGTTAAGCCTTCTAGTTTAGTCTCTAAGTCGTACCCTTAGTCATTTTCGCATTAACCATTAGCTTACTGCCATGTCAGCGTCCGAGTTGGTTGTTTATTAATTTTAGTTTGTTGCATCTTTGTCAGGACCTTTTGCCTAGCTCATTCTTAGTTTTTGGCTGCCAAAGTATTATACCTAAAGAGAAGTTAACTAGATTCAATAACATAAGCAACTGTCGCGACGCTCATTGCATCTTATCTCAAAATTATTTAACAAGCCAGTAAATCGTGGACAAACGCGGTCACTGGCTAACACTCAATCTGTCGACTCTCATGCATCTTGTTAGACATCTTTTTCATATCGTTTACATCTAATAACAAACGGAAATAAATGTTTGTCCAAATACGTTCTCTTGTTATCTGTAAATC 530 5268055 0.8643311 102 500 4289 0.945773525 1.596963434 0.145135566 0.150943396 0.282296651 530 20 14 593 3R:5267894-5268399 6 Hph FBtr0344333|FBtr0334275 5267839|5267839 5269046|5268598 TGCCAT 6mer2-7 dme-miR-263a-5p 3R + 5267895 5268399 5'utr Hph FlyBase G30371.1 AAACACACATGTATAAAGCTAGTTAAAAACTATTTATAGCTTCGGAGGGGCGGCAGCGCAAGCCCGCATTGCGAAAGTTAATCAAAGCTCCTTTAGTCGTTAAGCCTTCTAGTTTAGTCTCTAAGTCGTACCCTTAGTCATTTTCGCATTAACCATTAGCTTACTGCCATGTCAGCGTCCGAGTTGGTTGTTTATTAATTTTAGTTTGTTGCATCTTTGTCAGGACCTTTTGCCTAGCTCATTCTTAGTTTTTGGCTGCCAAAGTATTATACCTAAAGAGAAGTTAACTAGATTCAATAACATAAGCAACTGTCGCGACGCTCATTGCATCTTATCTCAAAATTATTTAACAAGCCAGTAAATCGTGGACAAACGCGGTCACTGGCTAACACTCAATCTGTCGACTCTCATGCATCTTGTTAGACATCTTTTTCATATCGTTTACATCTAATAACAAACGGAAATAAATGTTTGTCCAAATACGTTCTCTTGTTATCTGTAAATC 372 5268055 0.909777146 86 346 2965 0.925476603 1.882443217 0.131715771 0.379032258 0.59965338 372 37 6 534 3R:5267895-5268399 6 78 3919 FBgn0264785 976.6833333 49.43666667 74.10666667 0.079862118 1.577776279 1.052536884 4 4 4 0.1 dme-miR-1007-3p 7mer-A1 GAGCTTA 3R 5268548 5268554 + 3R_5268548_5268554_+ 0.813077382 0.823349387 0.818213385 0.007263401 Hph FBtr0334275|FBtr0344333 5267839|5267839 5268598|5269046 3R + 5268528 5268554 5'utr Hph FlyBase G40200.1 AAGTGGTTCTATTTGGTACAGAGCTTA 6 5268538 0.658841827 3 6 45 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3R:5268528-5268554 7 Hph FBtr0344333|FBtr0334275 5267839|5267839 5269046|5268598 GAGCTTA 7mer-A1 dme-miR-1007-3p 3R + 5268503 5268567 5'utr Hph FlyBase G30372.1 GTGGTTGTAGAGAGATGGATTTTATAAGTGGTTCTATTTGGTACAGAGCTTAAAGATACTAATAT 9 5268539 0.989654851 6 8 78 1 1.322219295 0.047619048 0.666666667 0.857142857 9 0 0 21 3R:5268503-5268567 7 5 3920 FBgn0264785 976.6833333 49.43666667 74.10666667 0.005119367 0.101139505 0.067470313 10 9 9.5 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 3R 5273137 5273142 - 3R_5273137_5273142_- 0.771274105 0.75306878 0.762171443 0.012873091 mtd FBtr0110932|FBtr0078813|FBtr0078817|FBtr0078814|FBtr0273432|FBtr0078812|FBtr0100197|FBtr0273433|FBtr0078815|FBtr0078810|FBtr0306695|FBtr0078818|FBtr0273431|FBtr0333695|FBtr0273434|FBtr0306694|FBtr0110933|FBtr0273430|FBtr0078811|FBtr0308580|FBtr0308581|FBtr0100199|FBtr0078816 5272945|5272945|5270114|5270114|5272945|5272945|5272945|5272945|5272945|5270114|5272945|5272945|5272945|5272945|5272945|5272945|5272945|5272438|5272945|5272945|5272945|5272945|5272945 5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946 3R - 5272951 5273418 3'utr mtd FlyBase G48103.1 ATTATGTTTAGTTCTTAATACCGAAAATTATAAACACCAAATTGTGAGAAGAGACATATTGAAAATAGGCAGATTTTTATCATTTATCGTGTCCAGTTCTCTGGATTGATTTCAGTTTGAATTTAGTTTCGATTGTTTGAGTTACTAGAGTTATTTGAGAACATTGTGAAAAGCGAAGCGAGCTGAGATGAGAAAAATAAAAAGAATGTCGATATAATTTATAGTGCAAAAGTGCTGATTGCAAGTAAAACTAAAGCGAAGATAACTTTAAACGATTTGACTTTTATGTATATGTAAAGAAGGAGCCGCGAAGAGCTGAGAGCGAGCGTTTTATTTTTAGTTTTACACGATATACATACATACATATATTTAATTACGATTATTTTAATGCTAATGATGTTGACTTTTATGCAATTATACTAAAACAAAAACAGAAACAACACCAGAATGAAATACACAATATTATAC 1178 5273135 0.946589854 78 1084 9277 0.918824353 1.686900962 0.282715185 0.176570458 0.321203639 1178 90 26 1313 3R:5272951-5273418 6 mtd FBtr0078810|FBtr0273431|FBtr0078811|FBtr0078818|FBtr0110933|FBtr0100199|FBtr0306694|FBtr0273430|FBtr0078815|FBtr0308580|FBtr0306695|FBtr0308581|FBtr0333695|FBtr0078816|FBtr0273434|FBtr0078813|FBtr0273432|FBtr0078814|FBtr0100197|FBtr0078812|FBtr0110932|FBtr0273433|FBtr0078817 5270114|5272945|5272945|5272945|5272945|5272945|5272945|5272438|5272945|5272945|5272945|5272945|5272945|5272945|5272945|5272945|5272945|5270114|5272945|5272945|5272945|5272945|5270114 5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 5273043 5273335 3'utr mtd FlyBase G36311.1 TTATCGTGTCCAGTTCTCTGGATTGATTTCAGTTTGAATTTAGTTTCGATTGTTTGAGTTACTAGAGTTATTTGAGAACATTGTGAAAAGCGAAGCGAGCTGAGATGAGAAAAATAAAAAGAATGTCGATATAATTTATAGTGCAAAAGTGCTGATTGCAAGTAAAACTAAAGCGAAGATAACTTTAAACGATTTGACTTTTATGTATATGTAAAGAAGGAGCCGCGAAGAGCTGAGAGCGAGCGTTTTATTTTTAGTTTTACACGATATACATACATACATATATTTAATTA 769 5273135 0.896639283 48 703 6108 0.90948651 1.977723605 0.298520453 0.348504551 0.563968668 769 94 10 1045 3R:5273043-5273335 6 403 3921 FBgn0013576 2915.913333 146.2033333 223.7233333 0.138207125 2.756435102 1.801332002 -7 -7 -7 0.1 dme-miR-980-5p 6mer3-8 GAAAAA 3R 5273700 5273705 - 3R_5273700_5273705_- 0.918695016 0.932365514 0.925530265 0.009666503 mtd FBtr0110932|FBtr0078813|FBtr0078817|FBtr0078814|FBtr0273432|FBtr0078812|FBtr0100197|FBtr0273433|FBtr0078815|FBtr0078810|FBtr0306695|FBtr0078818|FBtr0273431|FBtr0333695|FBtr0273434|FBtr0306694|FBtr0110933|FBtr0273430|FBtr0078811|FBtr0308580|FBtr0308581|FBtr0100199|FBtr0078816 5272945|5272945|5270114|5270114|5272945|5272945|5272945|5272945|5272945|5270114|5272945|5272945|5272945|5272945|5272945|5272945|5272945|5272438|5272945|5272945|5272945|5272945|5272945 5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946 3R - 5273678 5273837 3'utr mtd FlyBase G48104.3 GAGAAAGATGTCAAAAGCTGGTGTGCGTCCAAGGATCATCCCTTCGGAACGGTCCACACAGCCCGAACCCCGAAACACTTGAATACACGAACACCACCACATGAAGATGGTTTTGAAGGGATCTGATCTGAAGAAAAATGCTTGTGAAAACTCCGTTCTC 513 5273699 0.962691765 21 500 2456 0.978896104 1.877227325 0.327922078 0.169590643 0.308441558 513 6 7 603 3R:5273678-5273837 6 mtd FBtr0078810|FBtr0273431|FBtr0078811|FBtr0078818|FBtr0110933|FBtr0100199|FBtr0306694|FBtr0273430|FBtr0078815|FBtr0308580|FBtr0306695|FBtr0308581|FBtr0333695|FBtr0078816|FBtr0273434|FBtr0078813|FBtr0273432|FBtr0078814|FBtr0100197|FBtr0078812|FBtr0110932|FBtr0273433|FBtr0078817 5270114|5272945|5272945|5272945|5272945|5272945|5272945|5272438|5272945|5272945|5272945|5272945|5272945|5272945|5272945|5272945|5272945|5270114|5272945|5272945|5272945|5272945|5270114 5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946|5273946 GAAAAA 6mer3-8 dme-miR-980-5p 3R - 5273679 5273735 3'utr mtd FlyBase G36313.2 GAAGATGGTTTTGAAGGGATCTGATCTGAAGAAAAATGCTTGTGAAAACTCCGTTCT 369 5273699 0.902399657 10 349 1716 0.941520468 1.40519353 0.323586745 0.313351499 0.50877193 367 12 18 483 3R:5273679-5273735 6 412.5 3922 FBgn0013576 2915.913333 146.2033333 223.7233333 0.14146511 2.8214131 1.843795164 -6 -6 -6 0.1 dme-miR-8-3p 6mer2-7 AGTATT 3R 5396867 5396872 + 3R_5396867_5396872_+ 0.988976282 0.999998788 0.994487535 0.007794084 CG1172 FBtr0309312|FBtr0078792|FBtr0333810 5396179|5396179|5396179 5397614|5397188|5399510 3R + 5396854 5396895 3'utr CG1172 FlyBase G40227.1 AAACGAGAAACGTAGTATTTGGCCGCAATGGAAAGCATGCAA 7 5396873 0.946458281 2 7 31 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3R:5396854-5396895 6 CG1172 FBtr0078792|FBtr0333810|FBtr0309312 5396179|5396179|5396179 5397188|5399510|5397614 AGTATT 6mer2-7 dme-miR-8-3p 3R + 5396852 5396886 3'utr CG1172 FlyBase G30396.1 ATAAACGAGAAACGTAGTATTTGGCCGCAATGGAA 11 5396872 0.940816989 3 11 46 1 1.301029996 0.3 0.454545455 0.7 11 0 0 20 3R:5396852-5396886 6 9 3923 FBgn0264712 391.6633333 23.33 36.07 0.022978919 0.385769396 0.249514832 -6 -5 -5.5 0.1 dme-miR-999-3p 7mer-m8 AGTTAAC 3R 5397070 5397076 + 3R_5397070_5397076_+ 0.543220558 0.628880845 0.586050702 0.060570908 CG1172 FBtr0309312|FBtr0078792|FBtr0333810 5396179|5396179|5396179 5397614|5397188|5399510 3R + 5397031 5397141 3'utr CG1172 FlyBase G40228.1 GAGGAGGGAGGGCAGTGAATGCGAGGTGGGGAGTTGGAGAGTTAACCCAAGTACCTTATAAATGTATATGATTTAATTTGCGTTTGGAGTCAATAACTTATCTCTGATGTA 34 5397072 0.98171724 11 32 234 0.921052632 1.06694679 0.131578947 0.117647059 0.210526316 34 1 2 35 3R:5397031-5397141 7 CG1172 FBtr0078792|FBtr0333810|FBtr0309312 5396179|5396179|5396179 5397188|5399510|5397614 AGTTAAC 7mer-m8 dme-miR-999-3p 3R + 5397024 5397095 3'utr CG1172 FlyBase G30397.1 ACATCGTGAGGAGGGAGGGCAGTGAATGCGAGGTGGGGAGTTGGAGAGTTAACCCAAGTACCTTATAAATGT 15 5397072 0.946216683 7 15 61 1 1.255272505 0.166666667 0.2 0.333333333 15 0 0 18 3R:5397024-5397095 7 14.5 3924 FBgn0264712 391.6633333 23.33 36.07 0.037021592 0.62151736 0.401996119 -2 -2 -2 0.1 dme-miR-33-5p 6mer3-8 CAATGC 3R 5397500 5397505 + 3R_5397500_5397505_+ 0.950164488 0.608326967 0.779245728 0.241715614 CG1172 FBtr0309312|FBtr0333810 5396179|5396179 5397614|5399510 3R + 5397484 5397521 3'utr CG1172 FlyBase G40230.1 ACACTGTGCGAAAGTGCAATGCCAAAGTTGAAATAAAT 22 5397501 0.776059234 5 21 93 0.923076923 1.380211242 0.307692308 0.181818182 0.307692308 22 2 0 24 3R:5397484-5397521 6 CG1172 FBtr0333810|FBtr0309312 5396179|5396179 5399510|5397614 CAATGC 6mer3-8 dme-miR-33-5p 3R + 5397487 5397532 3'utr CG1172 FlyBase G30399.1 CTGTGCGAAAGTGCAATGCCAAAGTTGAAATAAATATTGATGGGTG 6 5397502 0.931761248 4 6 26 1 0.954242509 0.444444444 0.5 0.666666667 6 0 0 9 3R:5397487-5397532 6 12.5 3925 FBgn0264712 391.6633333 23.33 36.07 0.031915165 0.535790827 0.346548378 -1 -2 -1.5 0.1 dme-miR-307a-3p 8mer-A1 GGTTGTGA 3R 5458900 5458907 - 3R_5458900_5458907_- 0.67317427 0.673675332 0.673424801 0.00035426 PEK FBtr0078770|FBtr0330027|FBtr0330026 5458561|5458561|5458561 5459391|5459391|5459391 3R - 5458883 5458928 3'utr PEK FlyBase G48172.1 CTAATTGCCCATAGAGATAATGGTTGTGACTAATCGCTTGGCATAC 70 5458908 0.798438518 3 67 491 0.953488372 1.436692598 0.093023256 0.171428571 0.325581395 70 2 2 82 3R:5458883-5458928 8 PEK FBtr0330027|FBtr0330026|FBtr0078770 5458561|5458561|5458561 5459391|5459391|5459391 GGTTGTGA 8mer-A1 dme-miR-307a-3p 3R - 5458884 5458924 3'utr PEK FlyBase G36375.1 TTGCCCATAGAGATAATGGTTGTGACTAATCGCTTGGCATA 55 5458908 0.796734868 3 53 371 0.975609756 1.903089987 0.158536585 0.381818182 0.585365854 55 2 0 80 3R:5458884-5458924 8 62.5 3926 FBgn0037327 1339.34 35.69 54.59666667 0.046664775 1.75119081 1.144758532 1 1 1 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 5469515 5469520 + 3R_5469515_5469520_+ 0.970713739 0.997667665 0.984190702 0.019059356 CG12162 FBtr0078680|FBtr0078681 5469438|5469438 5469539|5469566 3R + 5469497 5469534 3'utr CG12162 FlyBase G40235.1 CATGCGTACATGTGTTTAGTGCAAATTACAATAATCAA 20 5469511 0.713485644 3 20 169 1 1.322219295 0 0.05 0.095238095 20 0 0 21 3R:5469497-5469534 6 CG12162 FBtr0078681|FBtr0078680 5469438|5469438 5469566|5469539 GTGCAA 6mer3-8 dme-miR-92b-3p 3R + 5469493 5469532 3'utr CG12162 FlyBase G30403.1 AATGCATGCGTACATGTGTTTAGTGCAAATTACAATAATC 13 5469512 0.740069938 3 13 107 1 1.361727836 0 0.461538462 0.695652174 13 0 0 23 3R:5469493-5469532 6 16.5 3927 FBgn0037329 203.12 15.37666667 23.49666667 0.081232769 1.073054411 0.702227266 4 3 3.5 0.1 dme-miR-999-3p 6mer2-7 GTTAAC 3R 5480471 5480476 - 3R_5480471_5480476_- 0.999909982 0.999826645 0.999868313 5.90E-05 ksr FBtr0344273|FBtr0078766|FBtr0344272 5478388|5480305|5479089 5480736|5480736|5480736 3R - 5480463 5480498 3'utr ksr FlyBase G48212.2 ACGAAACAAAGGCAAATCAAATGTTAACTCGAAAAA 29 5480477 0.930655244 2 28 112 0.96875 1.491361694 0.15625 0.068965517 0.15625 29 1 0 31 3R:5480463-5480498 6 ksr FBtr0078766|FBtr0344272|FBtr0344273 5480305|5479089|5478388 5480736|5480736|5480736 GTTAAC 6mer2-7 dme-miR-999-3p 3R - 5480444 5480492 3'utr ksr FlyBase G36399.1 CAAAGGCAAATCAAATGTTAACTCGAAAAAGACAAAACGCTTAAATGTT 18 5480477 0.775115524 2 15 72 0.842105263 0.903089987 0.157894737 0.055555556 0.105263158 18 2 1 16 3R:5480444-5480492 6 21.5 3928 FBgn0015402 480.34 14.36 21.92333333 0.044759962 1.497214485 0.980690284 1 1 1 0.1 dme-miR-34-5p 7mer-A1 ACTGCCA 3R 5485110 5485116 + 3R_5485110_5485116_+ 0.593337788 0.589994949 0.591666369 0.002363787 Hcs FBtr0078683|FBtr0345254|FBtr0345253|FBtr0336769 5484906|5484906|5484906|5484906 5485393|5485393|5485393|5485393 3R + 5485098 5485146 3'utr Hcs FlyBase G40256.1 ACTAAATTAAATACTGCCAAAGAGAATTATATGTTAAAGGAAGTCTCAA 12 5485111 0.958529711 4 12 57 1 1.176091259 0.066666667 0.166666667 0.333333333 12 0 0 15 3R:5485098-5485146 7 Hcs FBtr0345253|FBtr0336769|FBtr0078683|FBtr0345254 5484906|5484906|5484906|5484906 5485393|5485393|5485393|5485393 ACTGCCA 7mer-A1 dme-miR-34-5p 3R + 5485092 5485124 3'utr Hcs FlyBase G30417.1 TAATCCACTAAATTAAATACTGCCAAAGAGAAT 7 5485111 0.938792776 2 7 31 1 0.84509804 0.285714286 0 0 7 0 0 7 3R:5485092-5485124 7 8.5 3929 FBgn0037332 392.2933333 11.98 18.24666667 0.02166746 0.70951586 0.465838509 -1 -1 -1 0.1 dme-miR-1003-3p 7mer-m8 ATGTGAG 3R 5539637 5539643 - 3R_5539637_5539643_- 0.668167564 0.667131087 0.667649325 0.000732916 CG2519 FBtr0078761|FBtr0336771|FBtr0078762 5539508|5539508|5539508 5541031|5541031|5541031 3R - 5539603 5539666 3'utr CG2519 FlyBase G48224.1 ATGTATCAATAAATTATGAATGTATGTGAGCTCGCAACTTTATAAGCAATGTTTAGACGCAGGA 91 5539646 0.990777561 6 88 910 0.947916667 1.658011397 0.041666667 0.054945055 0.104166667 91 4 1 91 3R:5539603-5539666 7 CG2519 FBtr0078762|FBtr0078761|FBtr0336771 5539508|5539508|5539508 5541031|5541031|5541031 ATGTGAG 7mer-m8 dme-miR-1003-3p 3R - 5539608 5539660 3'utr CG2519 FlyBase G36409.1 CAATAAATTATGAATGTATGTGAGCTCGCAACTTTATAAGCAATGTTTAGACG 57 5539646 0.989592228 7 51 523 0.89010989 1.607455023 0.153846154 0.438596491 0.648351648 57 9 1 81 3R:5539608-5539660 7 73.5 3930 FBgn0037336 963.7466667 20.52333333 31.41666667 0.076264855 3.581289589 2.339522546 3 3 3 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 5540463 5540468 - 3R_5540463_5540468_- 0.999999248 0.999999595 0.999999421 2.83E-07 CG2519 FBtr0078761|FBtr0336771|FBtr0078762 5539508|5539508|5539508 5541031|5541031|5541031 3R - 5540452 5540483 3'utr CG2519 FlyBase G48229.1 ATGAGATTTTTCTTTGTACCTAACCAACAACA 12 5540469 0.865896085 2 11 94 1 1.176091259 0.333333333 0.166666667 0.333333333 12 0 0 15 3R:5540452-5540483 6 CG2519 FBtr0078762|FBtr0078761|FBtr0336771 5539508|5539508|5539508 5541031|5541031|5541031 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 5540451 5540493 3'utr CG2519 FlyBase G36413.1 AACATAAGCCATGAGATTTTTCTTTGTACCTAACCAACAACAA 16 5540469 0.981978876 3 15 113 1 1.361727836 0 0.375 0.565217391 16 0 0 23 3R:5540451-5540493 6 12.5 3931 FBgn0037336 963.7466667 20.52333333 31.41666667 0.012970213 0.609062855 0.397877984 1 1 1 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3R 5540650 5540656 - 3R_5540650_5540656_- 0.661577903 0.661604208 0.661591055 1.86E-05 CG2519 FBtr0078761|FBtr0336771|FBtr0078762 5539508|5539508|5539508 5541031|5541031|5541031 3R - 5540513 5540985 3'utr CG2519 FlyBase G48230.1 TCATATAGATTTCTCGTGGCTGCTCGCTGTTGAAAAAAATCCGTTCTATCGAATGAAATCTCGAATATTGTGTTATTAAAGCGATGTTTTAAAAAGGAATCCGATTGTTCACACAAGAGTCCGAATCTCAATTAGAAAAACAAAATTACAGACCAGGGAACAATCGTAAATACTTCAAATTTTCTTCCCTTCTCAATATGAAATCCAAGGCAGCTAGCTAAAGTGTAATAAGAGCAAATTTATCTAACTATATTTACAGTATATGATATACATATATGATTCGGTAATCTACACCGCATAGGCGAAAAATCGAAAAGTAAAAACTTCAATCTAGTCGCAAGCAAATTTTATGCAGCAATCTAATTCGTTTTCGTATGCAATCTATAGGCATATTCTAATCAAAGCTTCATGACAGTTTTACATCCGAGTTTAGTTTATTGCGATATCCGTTCTAAAAGCCAATAAAGAAACAT 351 5540657 0.980791009 67 305 2176 0.871733967 1.610423555 0.123515439 0.170940171 0.308788599 351 46 8 367 3R:5540513-5540985 7 CG2519 FBtr0078762|FBtr0078761|FBtr0336771 5539508|5539508|5539508 5541031|5541031|5541031 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3R - 5540623 5540671 3'utr CG2519 FlyBase G36415.1 AAGTAAAAACTTCAATCTAGTCGCAAGCAAATTTTATGCAGCAATCTAA 44 5540659 0.765630006 6 39 226 0.915492958 1.511883361 0.028169014 0.409090909 0.633802817 44 5 1 65 3R:5540623-5540671 7 49 3932 FBgn0037336 963.7466667 20.52333333 31.41666667 0.050843237 2.387526393 1.559681698 1 3 2 0.1 dme-miR-980-3p 8mer-A1 GGCAGCTA 3R 5540770 5540777 - 3R_5540770_5540777_- 0.502097194 0.659132635 0.580614915 0.111040796 CG2519 FBtr0078761|FBtr0336771|FBtr0078762 5539508|5539508|5539508 5541031|5541031|5541031 3R - 5540513 5540985 3'utr CG2519 FlyBase G48230.1 TCATATAGATTTCTCGTGGCTGCTCGCTGTTGAAAAAAATCCGTTCTATCGAATGAAATCTCGAATATTGTGTTATTAAAGCGATGTTTTAAAAAGGAATCCGATTGTTCACACAAGAGTCCGAATCTCAATTAGAAAAACAAAATTACAGACCAGGGAACAATCGTAAATACTTCAAATTTTCTTCCCTTCTCAATATGAAATCCAAGGCAGCTAGCTAAAGTGTAATAAGAGCAAATTTATCTAACTATATTTACAGTATATGATATACATATATGATTCGGTAATCTACACCGCATAGGCGAAAAATCGAAAAGTAAAAACTTCAATCTAGTCGCAAGCAAATTTTATGCAGCAATCTAATTCGTTTTCGTATGCAATCTATAGGCATATTCTAATCAAAGCTTCATGACAGTTTTACATCCGAGTTTAGTTTATTGCGATATCCGTTCTAAAAGCCAATAAAGAAACAT 351 5540784 0.980791009 67 305 2176 0.871733967 1.610423555 0.123515439 0.170940171 0.308788599 351 46 8 367 3R:5540513-5540985 8 CG2519 FBtr0078762|FBtr0078761|FBtr0336771 5539508|5539508|5539508 5541031|5541031|5541031 GGCAGCTA 8mer-A1 dme-miR-980-3p 3R - 5540748 5540871 3'utr CG2519 FlyBase G36417.1 AAGAGTCCGAATCTCAATTAGAAAAACAAAATTACAGACCAGGGAACAATCGTAAATACTTCAAATTTTCTTCCCTTCTCAATATGAAATCCAAGGCAGCTAGCTAAAGTGTAATAAGAGCAAA 106 5540782 0.854997342 22 90 520 0.838709677 1.414973348 0.064516129 0.349056604 0.55483871 106 21 4 130 3R:5540748-5540871 8 85.5 3933 FBgn0037336 963.7466667 20.52333333 31.41666667 0.08871626 4.16598993 2.721485411 7 5 6 0.1 "dme-miR-995-3p,dme-miR-998-3p" 6mer2-7 GGTGCT 3R 5552927 5552932 - 3R_5552927_5552932_- 0.975424913 0.999999996 0.987712454 0.01737722 Pcmt FBtr0339519 5552821 5553255 3R - 5552912 5553024 stop_codon Pcmt FlyBase G48254.1 AAGGTGGAGATGACACGTCTCATGGGCGTAATGTACGTCCCTCTCACGGATCTTCGCTCCTGACTGCACAGAGTGGGAAGGTCGCTCGTTGCGGTGCTGCTGCTCGTGTTTTT 17 5552924 0.88195566 8 15 109 0.894736842 1.230448921 0.315789474 0.117647059 0.210526316 17 2 0 17 3R:5552912-5553024 6 Pcmt FBtr0339519|FBtr0078758 5552821|5552821 5553255|5552961 GGTGCT 6mer2-7 "dme-miR-995-3p,dme-miR-998-3p" 3R - 5552900 5552947 3'utr Pcmt FlyBase G36433.1 AAGGTCGCTCGTTGCGGTGCTGCTGCTCGTGTTTTTTCTCTACCTAAT 8 5552924 0.983190637 5 8 65 1 1 0.4 0.25 0.4 8 0 0 10 3R:5552900-5552947 6 6.5 3934 FBgn0086768 265.8133333 34.49333333 52.17666667 0.02445325 0.188442211 0.124576758 -8 -8 -8 0.1 dme-miR-980-5p 7mer-m1 AAAAACT 3R 5558130 5558136 - 3R_5558130_5558136_- 0.765092004 0.765586663 0.765339333 0.000349806 Pi4KIIalpha FBtr0078756|FBtr0078755|FBtr0078757 5557661|5557661|5557661 5558297|5558297|5558297 3R - 5558108 5558149 3'utr Pi4KIIalpha FlyBase G48261.1 GTATTTTTTGCCAAAAAACTCAAATGGTCATATTCAATAATT 13 5558125 0.766484601 3 10 69 0.846153846 1.041392685 0.076923077 0.083333333 0.153846154 12 2 0 11 3R:5558108-5558149 7 Pi4KIIalpha FBtr0078757|FBtr0078756|FBtr0078755 5557661|5557661|5557661 5558297|5558297|5558297 AAAAACT 7mer-m1 dme-miR-980-5p 3R - 5558108 5558169 3'utr Pi4KIIalpha FlyBase G36438.1 GGAGCACGGAGCCTAGAAATGTATTTTTTGCCAAAAAACTCAAATGGTCATATTCAATAATT 9 5558124 0.97316693 6 9 57 1 1.041392685 0.090909091 0.222222222 0.363636364 9 0 0 11 3R:5558108-5558169 7 7 3935 FBgn0037339 341.1033333 13.78666667 21.30666667 0.020521641 0.507736944 0.32853567 -11 -12 -11.5 0.1 dme-miR-970-3p 6mer3-8 TCTTAT 3R 5570196 5570201 + 3R_5570196_5570201_+ 1 1 1 0 Rheb FBtr0078694|FBtr0078693 5570116|5570116 5570491|5570491 3R + 5570140 5570294 3'utr Rheb FlyBase G40293.1 CGGCCGAACTGTTGGAAATACGGCAAATCGCTATGGCAATACGAAAATCGATTATCTCTTATCTACACAGTTGGGTCAGCGTGCATGGCGGGGCCGTACCCTTTGTGCGCAGCAGGAAAATCTAAAAATCTAATAGACCTAGTATTCTTAAGACC 61 5570198 0.983994104 16 59 455 0.96969697 1.505149978 0.075757576 0.081967213 0.151515152 61 1 1 64 3R:5570140-5570294 6 Rheb FBtr0078694|FBtr0078693 5570116|5570116 5570491|5570491 TCTTAT 6mer3-8 dme-miR-970-3p 3R + 5570180 5570247 3'utr Rheb FlyBase G30441.1 ACGAAAATCGATTATCTCTTATCTACACAGTTGGGTCAGCGTGCATGGCGGGGCCGTACCCTTTGTGC 25 5570191 0.983910273 7 24 185 0.954545455 1.62324929 0 0.6 0.772727273 25 2 0 42 3R:5570180-5570247 6 30.5 3936 FBgn0041191 427.6933333 44.04666667 67.49 0.071312779 0.692447404 0.451918803 -2 5 1.5 0.1 dme-miR-980-5p 6mer3-8 GAAAAA 3R 5579575 5579580 - 3R_5579575_5579580_- 0.862600872 0.886859324 0.874730098 0.017153279 CG2926 FBtr0078752|FBtr0336762 5579299|5579299 5580143|5584787 3R - 5579516 5579602 3'utr CG2926 FlyBase G48281.1 ATTTAAATTAAAACACATCTGCGAAAAATGATTGATTTATAGCCACGACAAATTGGCTTGCACCAAATAAGGCGGTCAAATATTTTT 18 5579585 0.962064506 7 17 85 0.958333333 1.361727836 0 0.277777778 0.458333333 18 1 0 23 3R:5579516-5579602 6 CG2926 FBtr0078752|FBtr0336762 5579299|5579299 5580143|5584787 GAAAAA 6mer3-8 dme-miR-980-5p 3R - 5579522 5579598 3'utr CG2926 FlyBase G36453.1 AAATTAAAACACATCTGCGAAAAATGATTGATTTATAGCCACGACAAATTGGCTTGCACCAAATAAGGCGGTCAAAT 8 5579585 0.893888904 3 8 28 1 1 0.1 0.125 0.3 8 0 0 10 3R:5579522-5579598 6 10.5 3937 FBgn0037344 2023.256667 29.51333333 45.14 0.005189653 0.355771403 0.232609659 5 5 5 0.1 dme-miR-282-5p 7mer-A1 GAGGCTA 3R 5582119 5582125 - 3R_5582119_5582125_- 0.823349001 0.823349011 0.823349006 0 CG2926 FBtr0336762 5579299 5584787 3R - 5582099 5582179 5'utr CG2926 FlyBase G48289.1 ATTTGCAGTGCTGTGGGAGCAGTAAAGAAGACGAAGCGCAAGCGTAAAAAGTTGGAGGCTAAGCCAGTGGCTATCATCGAT 123 5582127 0.951597146 7 121 561 0.978571429 2.136720567 0.428571429 0.12195122 0.228571429 123 3 0 137 3R:5582099-5582179 7 CG2926 FBtr0336762 5579299 5584787 GAGGCTA 7mer-A1 dme-miR-282-5p 3R - 5582099 5582148 5'utr CG2926 FlyBase G36458.1 CGAAGCGCAAGCGTAAAAAGTTGGAGGCTAAGCCAGTGGCTATCATCGAT 87 5582127 0.817003252 4 83 401 0.944444444 2.075546961 0.531746032 0.356321839 0.555555556 87 7 0 119 3R:5582099-5582148 7 101.5 3938 FBgn0037344 2023.256667 29.51333333 45.14 0.050166646 3.43912356 2.248560035 2 2 2 0.1 dme-miR-305-5p 8mer-m1 AGTACAAT 3R 5584645 5584652 - 3R_5584645_5584652_- 0.570363037 0.570363041 0.570363039 0 CG2926 FBtr0336762 5579299 5584787 3R - 5584595 5584680 intron-5'utr CG2926 FlyBase G48294.1 AGGATGATGACGATATGAATGAAGATTTAGTACAATTAGATGATGATGATGAGGATACGGATATACCATTGCCTTTGGGGCCTGAG 52 5584654 0.724643409 14 52 383 1 1.763427994 0.172413793 0.115384615 0.206896552 52 0 0 58 3R:5584595-5584680 8 CG2926 FBtr0336762 5579299 5584787 AGTACAAT 8mer-m1 dme-miR-305-5p 3R - 5584534 5584670 5'utr CG2926 FlyBase G36463.1 CGATATGAATGAAGATTTAGTACAATTAGATGATGATGATGAGGATACGGATATACCATTGCCTTTGGGGCCTGAGCCCGAACCCGTTCCCGAAAAAGTCCCGAAAAGTAGTGATGATGACCTCTACGAGCCAGAGA 40 5584654 0.955552208 15 34 251 0.85 1.008600172 0.316666667 0.375 0.583333333 40 5 4 51 3R:5584534-5584670 8 31.5 3939 FBgn0037344 2023.256667 29.51333333 45.14 0.015568959 1.067314208 0.697828977 2 2 2 0.1 dme-miR-965-3p 6mer2-7 ACGCTT 3R 5589766 5589771 - 3R_5589766_5589771_- 0.999998394 0.998904761 0.999451578 0.000773292 noi FBtr0078751 5589599 5589820 3R - 5589735 5589773 3'utr noi FlyBase G48313.1 TGACGCTTCCTCTAAAACCTCAACAGTCTTTATAATTCA 6 5589762 0.753137976 5 6 40 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3R:5589735-5589773 6 noi FBtr0078751 5589599 5589820 ACGCTT 6mer2-7 dme-miR-965-3p 3R - 5589763 5589820 3'utr noi FlyBase G36475.1 AGGACAAGCCTACGATTATGGTCGCTTGAGTACCGGTCAATTCTATATGACGCTTCCT 5 5589780 0.986955637 3 3 33 0.875 0.84509804 0 0.4 0.625 5 1 0 7 3R:5589763-5589820 6 3 3940 FBgn0014366 277.7433333 18.25 27.88666667 0.010801339 0.164383562 0.107578293 -9 9 0 0.1 dme-miR-79-3p 6mer2-7 AGCTTT 3R 5594277 5594282 + 3R_5594277_5594282_+ 0.968680743 0.976435217 0.97255798 0.00548326 Vha26 FBtr0346137|FBtr0078701|FBtr0078700 5593353|5593353|5593353 5595356|5594699|5594699 3R + 5594245 5594305 3'utr Vha26 FlyBase G40316.1 TAGCTAAGTTTGTTGACCTGACCATCAAGTGCAGCTTTCACACCCTCATATAACTACTTAA 25 5594281 0.961779259 7 20 152 0.827586207 1.380211242 0.103448276 0.16 0.275862069 25 5 0 24 3R:5594245-5594305 6 Vha26 FBtr0078700|FBtr0078701|FBtr0346137 5593353|5593353|5593353 5594699|5594699|5595356 AGCTTT 6mer2-7 dme-miR-79-3p 3R + 5594136 5594299 3'utr Vha26 FlyBase G30454.1 ATGTCTGTTGTTGTTGAGATACCGAGAGTAGAGAATACACACTGCTTAGCACGCGACACTTAATACCCATTCATTACACATGCACCAACGACGATGAAGTTTTGCCAAGTAGCTAAGTTTGTTGACCTGACCATCAAGTGCAGCTTTCACACCCTCATATAACT 29 5594281 0.978436069 12 27 177 0.934782609 1.33243846 0.043478261 0.448275862 0.652173913 29 2 1 43 3R:5594136-5594299 6 16.5 3941 FBgn0015324 3424.973333 191.1566667 292.79 0.004817556 0.086316634 0.056354384 -4 -4 -4 0.1 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 3R 5603024 5603031 + 3R_5603024_5603031_+ 0.674922341 0.674981495 0.674951918 4.19E-05 CG1427 FBtr0333279 5601975 5603185 3R + 5603005 5603045 3'utr CG1427 FlyBase G40324.1 GCAGCAACCTGCAAGTTCCGTACCTGACTGTAGCGGCAGGA 7 5603020 0.874591877 3 7 29 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 3R:5603005-5603045 8 CG1427 FBtr0333279 5601975 5603185 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R + 5602988 5603045 intron-3'utr CG1427 FlyBase G30458.1 AGATTTCGGCTCCCACCGCAGCAACCTGCAAGTTCCGTACCTGACTGTAGCGGCAGGA 5 5603035 0.972291768 3 4 24 0.857142857 0.77815125 0.285714286 0.4 0.571428571 5 1 0 6 3R:5602988-5603045 8 5.5 3942 FBgn0037347 155.3333333 12.17666667 18.71333333 0.035407725 0.451683548 0.293908087 4 -11 -3.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 5616811 5616816 - 3R_5616811_5616816_- 0.999999903 0.999787182 0.999893543 0.000150402 Spec2 FBtr0078739 5616642 5617640 3R - 5616793 5616853 3'utr Spec2 FlyBase G48356.1 CTGGGCCAGCGACAATGCACCTAAGATGGACTATGGAGTACCTTTGTAGAACCCTGATTTA 22 5616827 0.96561233 4 22 119 1 1.380211242 0.083333333 0.090909091 0.166666667 22 0 0 24 3R:5616793-5616853 6 Spec2 FBtr0078739 5616642 5617640 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 5616795 5616852 3'utr Spec2 FlyBase G36505.1 TGGGCCAGCGACAATGCACCTAAGATGGACTATGGAGTACCTTTGTAGAACCCTGATT 25 5616809 0.966914639 4 24 141 0.952380952 1.602059991 0.30952381 0.44 0.666666667 25 2 0 40 3R:5616795-5616852 6 19 3943 FBgn0044823 199.1233333 13.74666667 20.92333333 0.09541825 1.382153249 0.908077107 11 -7 2 0.1 dme-miR-34-5p 7mer-A1 ACTGCCA 3R 5625661 5625667 + 3R_5625661_5625667_+ 0.823323167 0.823347107 0.823335137 1.69E-05 RpL13A FBtr0335214 5625375 5625947 3R + 5625565 5625713 3'utr RpL13A FlyBase G40338.1 GTGTGTTCGACGGCATCCCATCGCCCTACGACAAGCGTCGCCGCGTCGTCGTGCCCATCGCTATGCGTGTGCTGACCCTGCGCTCCGACCGCAAGTACTGCCAGGTGGGTCGCCTGTCGCACGAGGTCGGCTGGCACTACCAGGACGTG 93 5625660 0.900201278 22 87 372 0.930434783 2.029383778 0.295652174 0.204301075 0.356521739 93 8 0 107 3R:5625565-5625713 7 RpL13A FBtr0335214 5625375 5625947 ACTGCCA 7mer-A1 dme-miR-34-5p 3R + 5625565 5625686 3'utr RpL13A FlyBase G30469.1 GTGTGTTCGACGGCATCCCATCGCCCTACGACAAGCGTCGCCGCGTCGTCGTGCCCATCGCTATGCGTGTGCTGACCCTGCGCTCCGACCGCAAGTACTGCCAGGTGGGTCGCCTGTCGCAC 64 5625660 0.837979753 17 56 282 0.884955752 1.301029996 0.247787611 0.515625 0.725663717 64 9 4 100 3R:5625565-5625686 7 34 3944 FBgn0037351 13566.65333 2375.826667 3587.31 0.002506145 0.014310808 0.009477854 1 1 1 0.1 dme-miR-988-3p 7mer-m8 ACAAGGG 3R 5625878 5625884 + 3R_5625878_5625884_+ 0.657554988 0.671796207 0.664675598 0.010070049 RpL13A FBtr0335214 5625375 5625947 3R + 5625737 5625948 3'utr RpL13A FlyBase G40339.1 CAAGGCCAAGCTCCGTGTCACCCTCAAGCACAACCGCGAGCTGAAGAAGCTGACGGTCAAGGCGCGCGAGAACATCGCGAAGGCCGCCGAGCCCTTCAACAAAATCATCAAATCCTACGGCTACGAGGTTTAAGGACAACAACAAGGGCAGAATTACATACGTTCAGATGCGTAGAAGTTTTTTAAAAGAGAATAAAACAACATCTAGTTTA 97 5625866 0.948433824 21 75 323 0.775 1.968482949 0.091666667 0.216494845 0.366666667 97 27 0 93 3R:5625737-5625948 7 RpL13A FBtr0335214 5625375 5625947 ACAAGGG 7mer-m8 dme-miR-988-3p 3R + 5625842 5625950 3'utr RpL13A FlyBase G30470.1 CATCAAATCCTACGGCTACGAGGTTTAAGGACAACAACAAGGGCAGAATTACATACGTTCAGATGCGTAGAAGTTTTTTAAAAGAGAATAAAACAACATCTAGTTTAAA 44 5625858 0.943848731 13 33 188 0.769230769 1.77815125 0.141025641 0.386363636 0.653846154 44 18 0 60 3R:5625842-5625950 7 19.5 3945 FBgn0037351 13566.65333 2375.826667 3587.31 0.001437348 0.008207669 0.005435828 12 20 16 0.1 dme-miR-277-3p 7mer-A1 GCATTTA 3R 5633191 5633197 + 3R_5633191_5633197_+ 0.817906853 0.823339084 0.820622969 0.003841145 CG31549 FBtr0078707|FBtr0335215 5633168|5633168 5633321|5633321 3R + 5633129 5633210 stop_codon CG31549 FlyBase G40345.1 TGCCCGTCGATGGAGGTCGTCACGCCATGTGCCCGCGATAGGATGCGGATGAGCAAATGGTGGCATTTATCGAATTTAGCGT 34 5633186 0.810633139 8 29 206 0.860465116 1.091080469 0.348837209 0.176470588 0.348837209 34 4 2 37 3R:5633129-5633210 7 CG31549 FBtr0335215|FBtr0078707 5633168|5633168 5633321|5633321 GCATTTA 7mer-A1 dme-miR-277-3p 3R + 5633168 5633199 stop_codon CG31549 FlyBase G30475.1 AGGATGCGGATGAGCAAATGGTGGCATTTATC 7 5633186 0.865596495 2 6 40 0.875 0.84509804 0.125 0.142857143 0.25 7 1 0 7 3R:5633168-5633199 7 17 3946 FBgn0051549 46.66666667 5.68 8.726666667 0.364285714 2.992957746 1.948051948 5 5 5 0.1 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3R 5640284 5640289 - 3R_5640284_5640289_- 0.694372623 0.575928412 0.635150518 0.083752697 MTA1-like FBtr0078733|FBtr0290206|FBtr0330315|FBtr0078734 5639117|5638653|5639117|5639117 5640428|5640428|5640302|5640428 3R - 5640113 5640306 5'utr MTA1-like FlyBase G48370.1 CTAGGAGCACTCTCTGGTTTGACTGACGGGCTTGCCATGTACATACACCCGCAGCATAAGGCACACAGACGTGTGGACAGGCATTCGACTTAGGATCAGGATCAGTGTAGTTACAGCATCACTGTATGAACAGGACAACAAAACGCGATACCCGATAGCAACCACAAACCACTTTATTAGCGCTTAAATAGATG 45 5640289 0.965573035 14 40 215 0.839285714 1.371067862 0.142857143 0.2 0.357142857 45 8 1 47 3R:5640113-5640306 6 MTA1-like FBtr0078734|FBtr0330315|FBtr0290206|FBtr0078733 5639117|5639117|5638653|5639117 5640428|5640302|5640428|5640428 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3R - 5640270 5640301 3'utr MTA1-like FlyBase G36517.1 AGCACTCTCTGGTTTGACTGACGGGCTTGCCA 6 5640288 0.648616718 4 6 45 1 1.204119983 0.4375 0.833333333 0.9375 6 0 0 16 3R:5640270-5640301 6 9 3947 FBgn0027951 1255.973333 34.05666667 52.26666667 0.007165757 0.26426544 0.172193878 0 -1 -0.5 0.1 dme-miR-7-5p 6mer3-8 GTCTTC 3R 5640367 5640372 - 3R_5640367_5640372_- 0.999999979 0.999983356 0.999991667 1.17E-05 MTA1-like FBtr0078733|FBtr0290206|FBtr0078734 5639117|5638653|5639117 5640428|5640428|5640428 3R - 5640353 5640393 3'utr MTA1-like FlyBase G48371.1 ATCGGCAACCAAGTTGTTATCGTCTTCAGCAAGTAGGTTCG 8 5640374 0.707407518 2 5 47 0.666666667 0.77815125 0.111111111 0.125 0.222222222 8 3 0 6 3R:5640353-5640393 6 MTA1-like FBtr0078734|FBtr0290206|FBtr0078733 5639117|5638653|5639117 5640428|5640428|5640428 GTCTTC 6mer3-8 dme-miR-7-5p 3R - 5640347 5640383 3'utr MTA1-like FlyBase G36518.1 AAGTTGTTATCGTCTTCAGCAAGTAGGTTCGAGCAGC 8 5640374 0.983903798 2 8 61 1 1.041392685 0 0.375 0.545454545 8 0 0 11 3R:5640347-5640383 6 7 3948 FBgn0027951 1255.973333 34.05666667 52.26666667 0.005573367 0.205539787 0.133928571 2 2 2 0.1 dme-miR-970-3p 6mer3-8 TCTTAT 3R 5652596 5652601 + 3R_5652596_5652601_+ 0.996296028 0.999997276 0.998146652 0.002617214 Sec23 FBtr0078711|FBtr0078710|FBtr0304794|FBtr0330314|FBtr0309091|FBtr0339320|FBtr0310266 5652469|5652469|5652469|5652469|5652469|5652469|5652469 5652629|5652629|5652629|5652629|5652629|5652629|5652629 3R + 5652570 5652633 3'utr Sec23 FlyBase G40382.1 ATACAACCACTTATTCCAATTGATCGTCTTATAACGCAATAAACTATTCAAATTATGTTCAACA 63 5652589 0.788541137 9 61 555 0.963414634 1.897627091 0.036585366 0.222222222 0.402439024 63 3 0 79 3R:5652570-5652633 6 Sec23 FBtr0310266|FBtr0339320|FBtr0309091|FBtr0330314|FBtr0304794|FBtr0078710|FBtr0078711 5652469|5652469|5652469|5652469|5652469|5652469|5652469 5652629|5652629|5652629|5652629|5652629|5652629|5652629 TCTTAT 6mer3-8 dme-miR-970-3p 3R + 5652520 5652608 3'utr Sec23 FlyBase G30497.1 GAAGGCGAACGACACCTGGAATCAATGGTCCAGGCAATGAAATTACGAATATACAACCACTTATTCCAATTGATCGTCTTATAACGCAA 37 5652590 0.987430809 10 35 310 0.94 1.672097858 0.02 0.27027027 0.46 37 3 0 47 3R:5652520-5652608 6 46.5 3949 FBgn0262125 974.67 44.53666667 67.54666667 0.047708455 1.044083527 0.688412949 7 6 6.5 0.1 dme-miR-282-5p 6mer3-8 AGAGGC 3R 5653165 5653170 - 3R_5653165_5653170_- 0.798931254 0.685827612 0.742379433 0.079976393 elm FBtr0334953|FBtr0078732 5652638|5652831 5653251|5653251 3R - 5653140 5653274 stop_codon elm FlyBase G48391.1 TGTCCATACGGTTTCTCAACTAGGCTAGCTGGATGCGGCAATCACGAGGAAAGAGCGACCTTCTTAGTCAGTGTGTACCAAATAGTTTAGGATGCAGTTAGTCGAGAGGCATTCCGGCGGGTTACTGAAAACTCT 123 5653163 0.978011044 20 118 782 0.957746479 1.832508913 0.183098592 0.138211382 0.253521127 123 5 1 136 3R:5653140-5653274 6 elm FBtr0334953|FBtr0078732 5652638|5652831 5653251|5653251 AGAGGC 6mer3-8 dme-miR-282-5p 3R - 5653141 5653229 3'utr elm FlyBase G36537.1 GAGGAAAGAGCGACCTTCTTAGTCAGTGTGTACCAAATAGTTTAGGATGCAGTTAGTCGAGAGGCATTCCGGCGGGTTACTGAAAACTC 74 5653163 0.972309997 9 71 454 0.958677686 2.064457989 0.289256198 0.445945946 0.661157025 74 5 0 116 3R:5653141-5653229 6 59.5 3950 FBgn0037358 499.3333333 46.51666667 71.55666667 0.119158879 1.27911143 0.831508828 -7 -7 -7 0.1 dme-miR-968-5p 8mer-A1 ACTACTTA 3R 5678828 5678835 + 3R_5678828_5678835_+ 0.627613941 0.627636947 0.627625444 1.63E-05 Atg17 FBtr0078716|FBtr0334946 5678800|5678800 5679930|5679930 3R + 5678812 5678868 3'utr Atg17 FlyBase G40433.1 TTGGGACTAACATATAACTACTTATATACATAAACGGAGTGTGTATCTAGGCTAAAT 17 5678836 0.77576922 5 14 122 0.823529412 0.84509804 0.411764706 0 0 17 2 1 14 3R:5678812-5678868 8 Atg17 FBtr0334946|FBtr0078716 5678800|5678800 5679930|5679930 ACTACTTA 8mer-A1 dme-miR-968-5p 3R + 5678793 5678892 stop_codon Atg17 FlyBase G30533.1 TCCGAGTAGTGTACGACAGTTGGGACTAACATATAACTACTTATATACATAAACGGAGTGTGTATCTAGGCTAAATCTTGTACTCTATGTAGGAACCGCA 22 5678836 0.977926325 8 19 127 0.9 1.431363764 0.366666667 0.318181818 0.5 22 3 0 27 3R:5678793-5678892 8 12 3951 FBgn0037363 1350.75 25.94 39.87666667 0.008883953 0.462606014 0.300927861 -8 -8 -8 0.1 dme-miR-7-5p 6mer2-7 TCTTCC 3R 5679543 5679548 + 3R_5679543_5679548_+ 0.999996858 0.617344837 0.808670847 0.270575895 Atg17 FBtr0078716|FBtr0334946 5678800|5678800 5679930|5679930 3R + 5679473 5679564 3'utr Atg17 FlyBase G40434.1 GAAACAAGAAACACAATCTTTTGGGCTCAGCCTGCGAAAAACACAGTTTTATGCTCAGCTTTTACCACTCTCTTCCCCTGACCCTCCAGAAA 11 5679550 0.97039589 6 11 66 1 1.113943352 0.076923077 0.181818182 0.307692308 11 0 0 13 3R:5679473-5679564 6 Atg17 FBtr0334946|FBtr0078716 5678800|5678800 5679930|5679930 TCTTCC 6mer2-7 dme-miR-7-5p 3R + 5679524 5679565 3'utr Atg17 FlyBase G30534.1 TGCTCAGCTTTTACCACTCTCTTCCCCTGACCCTCCAGAAAT 19 5679551 0.975505963 2 17 94 0.903225806 1.447158031 0 0.526315789 0.709677419 19 3 0 28 3R:5679524-5679565 6 13 3952 FBgn0037363 1350.75 25.94 39.87666667 0.009624283 0.501156515 0.326005183 -7 -8 -7.5 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 5712022 5712028 + 3R_5712022_5712028_+ 0.530171585 0.523223306 0.526697446 0.00491319 plx FBtr0302092|FBtr0302091|FBtr0334947|FBtr0302090|FBtr0334948 5711955|5711955|5711955|5711955|5711955 5712837|5712837|5712837|5712837|5712837 3R + 5712003 5712101 3'utr plx FlyBase G40454.1 AAGGCCCGCCGGCAGAACGGGCAGCTTTCAAACCCAACGCTACTCATAACCTCTTCTGTTGCGGCTTAGATACGATTAACCCAACCTATAAGATACAAA 40 5712049 0.97420217 10 40 246 1 1.707570176 0.176470588 0.175 0.352941176 40 0 0 51 3R:5712003-5712101 7 plx FBtr0302090|FBtr0334948|FBtr0302091|FBtr0334947|FBtr0302092 5711955|5711955|5711955|5711955|5711955 5712837|5712837|5712837|5712837|5712837 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 5712003 5712074 3'utr plx FlyBase G30546.1 AAGGCCCGCCGGCAGAACGGGCAGCTTTCAAACCCAACGCTACTCATAACCTCTTCTGTTGCGGCTTAGATA 27 5712029 0.978762343 7 23 157 0.847826087 1.113943352 0.282608696 0.444444444 0.673913043 27 5 2 39 3R:5712003-5712074 7 7.5 3953 FBgn0261261 331.2833333 6.486666667 9.993333333 0.022639231 1.156217883 0.750500334 -27 -7 -17 0.1 dme-miR-8-3p 6mer2-7 AGTATT 3R 5745763 5745768 + 3R_5745763_5745768_+ 0.999422933 1 0.999711466 0.000408071 Madm FBtr0078722 5745749 5746862 3R + 5745750 5745795 3'utr Madm FlyBase G40483.1 AAAGTATCAGCTTAGTATTCAGGGCATGCCGGCGCGTATTGTTTTT 9 5745761 0.767541682 4 8 56 0.909090909 1 0.363636364 0.222222222 0.363636364 9 1 0 10 3R:5745750-5745795 6 Madm FBtr0078722 5745749 5746862 AGTATT 6mer2-7 dme-miR-8-3p 3R + 5745752 5745793 3'utr Madm FlyBase G30565.1 AGTATCAGCTTAGTATTCAGGGCATGCCGGCGCGTATTGTTT 5 5745767 0.974262638 5 5 27 1 0.77815125 0.5 0.2 0.333333333 5 0 0 6 3R:5745752-5745793 6 5.5 3954 FBgn0027497 693.01 24.06333333 37.01 0.007936393 0.228563513 0.148608484 2 -4 -1 0.1 dme-miR-12-5p 7mer-m8 AATACTC 3R 5780371 5780377 + 3R_5780371_5780377_+ 0.674514529 0.674514481 0.674514505 0 jagn FBtr0078624|FBtr0078625 5780365|5780365 5781308|5780763 3R + 5780357 5780447 stop_codon jagn FlyBase G40487.1 GTTCCAGTAATCTAAATACTCGCCAAACTAGTAAACGCCGGAATGCAGGGCTAGTTGTAAATAATTTGGAAACTTGAAACTAACTCAAAAC 37 5780373 0.830340841 8 35 177 0.94 1.672097858 0.16 0.243243243 0.44 37 3 0 47 3R:5780357-5780447 7 jagn FBtr0078624|FBtr0078625 5780365|5780365 5781308|5780763 AATACTC 7mer-m8 dme-miR-12-5p 3R + 5780360 5780432 stop_codon jagn FlyBase G30566.1 CCAGTAATCTAAATACTCGCCAAACTAGTAAACGCCGGAATGCAGGGCTAGTTGTAAATAATTTGGAAACTTG 28 5780373 0.996941906 5 27 134 0.975609756 1.602059991 0.097560976 0.25 0.487804878 28 1 0 40 3R:5780360-5780432 7 26.5 3955 FBgn0037374 792.6 64.87666667 99.02 0.033434267 0.408467348 0.267622702 -2 -2 -2 0.1 dme-miR-970-3p 6mer3-8 TCTTAT 3R 5780626 5780631 + 3R_5780626_5780631_+ 1 1 1 0 jagn FBtr0078624|FBtr0078625 5780365|5780365 5781308|5780763 3R + 5780469 5780641 3'utr jagn FlyBase G40488.1 GAAACTATGGTAAACTAAAGTTATGCAGCTGTTAAGGTATCGCACACTTAGTCATACAGGAAGGGAAACATATGGTCGAAACTGAGCGAAGCGTCGGCGGTAAGGTTATTGTTAGTTGAAAGTTAGTTGATACCGTTTTCAAATTGATTAAATAGACTCTTATCCATATACAC 81 5780621 0.986560022 19 78 658 0.98019802 1.51851394 0.089108911 0.222222222 0.376237624 81 0 2 99 3R:5780469-5780641 6 jagn FBtr0078624|FBtr0078625 5780365|5780365 5781308|5780763 TCTTAT 6mer3-8 dme-miR-970-3p 3R + 5780582 5780648 3'utr jagn FlyBase G30568.1 AGTTGAAAGTTAGTTGATACCGTTTTCAAATTGATTAAATAGACTCTTATCCATATACACATGTACA 35 5780621 0.986078145 6 35 295 1 1.662757832 0.043478261 0.285714286 0.456521739 35 0 0 46 3R:5780582-5780648 6 46 3956 FBgn0037374 792.6 64.87666667 99.02 0.058036841 0.709037661 0.464552616 5 5 5 0.1 dme-miR-8-3p 7mer-A1 AGTATTA 3R 5798593 5798599 + 3R_5798593_5798599_+ 0.710200018 0.413838896 0.562019457 0.209558943 CG10979 FBtr0078631|FBtr0335518 5798393|5798393 5798749|5799994 3R + 5798530 5798683 3'utr CG10979 FlyBase G40526.1 AGTGTCCTTATTGTAAAACCAACTAAGCAAGAAACAGAATCCCTAAATGATAAATACGCTTCGAGTATTACGCGGTAAAAACAACCAAAACGAATTGAAAATCGTAGCATAATTTTGGGCTATTAGCAAATGTTTGTTGTTTGTGTGAAAAAGT 58 5798589 0.946079535 18 53 393 0.925373134 1.315270435 0.164179104 0.137931034 0.253731343 58 3 2 62 3R:5798530-5798683 7 CG10979 FBtr0335518|FBtr0078631 5798393|5798393 5799994|5798749 AGTATTA 7mer-A1 dme-miR-8-3p 3R + 5798567 5798611 3'utr CG10979 FlyBase G30589.1 AATCCCTAAATGATAAATACGCTTCGAGTATTACGCGGTAAAAAC 22 5798588 0.774667251 3 21 146 0.941176471 1.505149978 0.088235294 0.318181818 0.558823529 22 2 0 32 3R:5798567-5798611 7 31.5 3957 FBgn0037379 1005.826667 25.93333333 39.53 0.031317523 1.214652956 0.796863142 4 5 4.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 5798721 5798726 + 3R_5798721_5798726_+ 0.999907155 0.999884223 0.999895689 1.63E-05 CG10979 FBtr0078631|FBtr0335518 5798393|5798393 5798749|5799994 3R + 5798697 5798777 3'utr CG10979 FlyBase G40527.1 AATGTTATAGTTAATAATGTATATGTACCTAATTTTATAATCCCGCATAAAGTAAAACACGCAAGTGTATACGGTTGTTGA 77 5798720 0.991226121 5 74 782 0.968085106 1.959041392 0.021276596 0.194805195 0.340425532 77 3 0 91 3R:5798697-5798777 6 CG10979 FBtr0335518|FBtr0078631 5798393|5798393 5799994|5798749 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 5798700 5798744 3'utr CG10979 FlyBase G30591.1 GTTATAGTTAATAATGTATATGTACCTAATTTTATAATCCCGCAT 43 5798720 0.814240558 2 42 454 0.98245614 1.748188027 0 0.23255814 0.421052632 43 1 0 56 3R:5798700-5798744 6 58.5 3958 FBgn0037379 1005.826667 25.93333333 39.53 0.058161115 2.255784062 1.479888692 1 1 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 3R 5799020 5799027 + 3R_5799020_5799027_+ 0.643565709 0.643565351 0.64356553 2.12E-07 CG10979 FBtr0335518 5798393 5799994 3R + 5798973 5799046 3'utr CG10979 FlyBase G40528.1 TTGTTGAACTTTTGTTTGCTCGCATTTGTAGGTCTCTTCTAAAGCATACCAAAGAATTACTCTTTGTCGACCAA 17 5799019 0.983384985 7 15 126 0.842105263 0.726998728 0.105263158 0.117647059 0.210526316 17 1 2 16 3R:5798973-5799046 8 CG10979 FBtr0335518 5798393 5799994 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 5798995 5799034 3'utr CG10979 FlyBase G30592.1 CATTTGTAGGTCTCTTCTAAAGCATACCAAAGAATTACTC 7 5799019 0.964070263 2 7 49 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3R:5798995-5799034 8 9.5 3959 FBgn0037379 1005.826667 25.93333333 39.53 0.009444967 0.366323907 0.240323805 1 1 1 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 5799436 5799441 + 3R_5799436_5799441_+ 0.999999998 0.999999853 0.999999925 7.07E-08 CG10979 FBtr0335518 5798393 5799994 3R + 5799418 5799462 3'utr CG10979 FlyBase G40530.1 AGACATTTGGCAGAGTCCTGATCTACACGAGTGGTTCAACGTATT 8 5799425 0.976524514 4 7 52 0.916666667 1.041392685 0 0.375 0.583333333 8 1 0 11 3R:5799418-5799462 6 CG10979 FBtr0335518 5798393 5799994 TGATCT 6mer3-8 dme-bantam-3p 3R + 5799410 5799466 3'utr CG10979 FlyBase G30593.1 TCCCTCGCAGACATTTGGCAGAGTCCTGATCTACACGAGTGGTTCAACGTATTTATA 8 5799437 0.96422517 5 8 47 1 1.230448921 0.117647059 0.625 0.823529412 8 0 0 17 3R:5799410-5799466 6 7.5 3960 FBgn0037379 1005.826667 25.93333333 39.53 0.007456553 0.289203085 0.18972932 11 -1 5 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3R 5826342 5826348 + 3R_5826342_5826348_+ 0.521223846 0.521223729 0.521223787 7.07E-08 dgrn FBtr0078638|FBtr0078639|FBtr0344116 5826237|5826237|5826237 5826576|5826576|5826576 3R + 5826284 5826402 3'utr dgrn FlyBase G40537.1 AATATAGTTTAAAAAAAAACGCTTAACTATGTTAGAGACGGCAAATAATGTCTGTTCTTGTGATTCAGAAAAAATTAGTTATTTAAGTTGTCCTATGTAATCAGTGGCGCCCAAAAATA 83 5826341 0.99890242 16 73 711 0.871287129 1.467361417 0.297029703 0.168674699 0.316831683 83 11 2 88 3R:5826284-5826402 7 dgrn FBtr0078638|FBtr0078639|FBtr0344116 5826237|5826237|5826237 5826576|5826576|5826576 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 5826258 5826373 3'utr dgrn FlyBase G30596.1 ATTTTTTGCTCTGTGAGCCTTAATATAATATAGTTTAAAAAAAAACGCTTAACTATGTTAGAGACGGCAAATAATGTCTGTTCTTGTGATTCAGAAAAAATTAGTTATTTAAGTTG 48 5826341 0.802247247 13 43 434 0.925373134 1.315270435 0.208955224 0.270833333 0.47761194 48 3 2 62 3R:5826258-5826373 7 48.5 3961 FBgn0037384 485 36.97 56.92333333 0.1 1.311874493 0.852023189 1 1 1 0.1 dme-miR-252-5p 6mer3-8 GTACTT 3R 5849755 5849760 - 3R_5849755_5849760_- 0.999862131 0.764245 0.882053565 0.166606449 disp FBtr0078665 5849695 5850520 3R - 5849705 5849811 3'utr disp FlyBase G48473.1 TTATATCCCTAAACAATGACGTATTGTAATTACCTGCAACAAAATGGCCCTGTACTTCCTTCATTGAACTTATGTGTTGAAGTGATTTAATAAATGTTACTTGTAAA 19 5849767 0.982057104 10 19 146 1 1.301029996 0.05 0.052631579 0.1 19 0 0 20 3R:5849705-5849811 6 disp FBtr0078665 5849695 5850520 GTACTT 6mer3-8 dme-miR-252-5p 3R - 5849749 5849782 3'utr disp FlyBase G36593.1 TTACCTGCAACAAAATGGCCCTGTACTTCCTTCA 13 5849767 0.914084898 3 12 78 1 1.278753601 0.263157895 0.384615385 0.578947368 13 0 0 19 3R:5849749-5849782 6 12.5 3962 FBgn0029088 548.99 13.48 20.58 0.022769085 0.927299703 0.607385811 7 7 7 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 5849859 5849866 - 3R_5849859_5849866_- 0.650171311 0.650171304 0.650171307 0 disp FBtr0078665|FBtr0078665|FBtr0078665 5849695|5849695|5849695 5850520|5850520|5850520 3R - 5849838 5849887 3'utr disp FlyBase G48474.1 ACGTTTGTAATAACCATGTAACTGTGATACAGAAGGTGAGAATCTTAATG 23 5849869 0.710328348 5 19 140 0.807692308 1.322219295 0.076923077 0.130434783 0.230769231 23 5 0 21 3R:5849838-5849887 8 disp FBtr0078665|FBtr0078665|FBtr0078665 5849695|5849695|5849695 5850520|5850520|5850520 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 5849806 5849897 3'utr disp FlyBase G36594.1 ACACACGCTCACGTTTGTAATAACCATGTAACTGTGATACAGAAGGTGAGAATCTTAATGAAATTGGTGTTTATACAGACATAGTGTTATAT 28 5849870 0.989007898 9 18 178 0.684210526 0.812913357 0.157894737 0.296296296 0.5 27 9 3 26 3R:5849806-5849897 8 22 3963 FBgn0029088 548.99 13.48 20.58 0.04007359 1.632047478 1.068999028 3 4 3.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 6000820 6000826 - 3R_6000820_6000826_- 0.7529189 0.75304482 0.75298186 8.90E-05 Rm62 FBtr0309321|FBtr0309321|FBtr0309321|FBtr0078653|FBtr0078653|FBtr0078653|FBtr0078650|FBtr0078650|FBtr0078650|FBtr0078651|FBtr0078651|FBtr0078651|FBtr0302597|FBtr0302597|FBtr0302597|FBtr0309322|FBtr0309322|FBtr0309322|FBtr0078654|FBtr0078654|FBtr0078654|FBtr0309320|FBtr0309320|FBtr0309320|FBtr0078649|FBtr0078649|FBtr0078649|FBtr0301947|FBtr0301947|FBtr0301947|FBtr0078652|FBtr0078652|FBtr0078652|FBtr0309319|FBtr0309319|FBtr0309319 6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000424|6000424|6000424|6000429|6000429|6000429|6000429|6000429|6000429|6000424|6000424|6000424|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429 6003027|6003027|6003027|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6002635|6002635|6002635|6001162|6001162|6001162|6002646|6002646|6002646|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6003646|6003646|6003646 3R - 6000799 6000924 3'utr Rm62 FlyBase G48504.2 AAGTTATTTGACGCTGGCCGCGAGGTCGGTACAACACAATCCAATTGAGAACATCAAAAACACTTTACTTAAACGCAAAAACCAATTTTCAAATATCATGTGATAATTTCTTAATTTAACGCAACG 195 6000829 0.807415952 23 177 1847 0.918103448 1.629409599 0.043103448 0.174358974 0.306034483 195 15 4 213 3R:6000799-6000924 7 Rm62 FBtr0078654|FBtr0078654|FBtr0078654|FBtr0309320|FBtr0309320|FBtr0309320|FBtr0301947|FBtr0301947|FBtr0301947|FBtr0078649|FBtr0078649|FBtr0078649|FBtr0309319|FBtr0309319|FBtr0309319|FBtr0078652|FBtr0078652|FBtr0078652|FBtr0309321|FBtr0309321|FBtr0309321|FBtr0078650|FBtr0078650|FBtr0078650|FBtr0078651|FBtr0078651|FBtr0078651|FBtr0302597|FBtr0302597|FBtr0302597|FBtr0078653|FBtr0078653|FBtr0078653|FBtr0309322|FBtr0309322|FBtr0309322 6000429|6000429|6000429|6000424|6000424|6000424|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000424|6000424|6000424|6000429|6000429|6000429|6000429|6000429|6000429 6001162|6001162|6001162|6002646|6002646|6002646|6001162|6001162|6001162|6001162|6001162|6001162|6003646|6003646|6003646|6001162|6001162|6001162|6003027|6003027|6003027|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6002635|6002635|6002635 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 6000802 6000878 3'utr Rm62 FlyBase G36612.1 GAGAACATCAAAAACACTTTACTTAAACGCAAAAACCAATTTTCAAATATCATGTGATAATTTCTTAATTTAACGCA 138 6000830 0.776641012 15 123 1287 0.893939394 1.946943271 0.065656566 0.369565217 0.560606061 138 20 1 177 3R:6000802-6000878 7 145.5 3964 FBgn0003261 4149.96 168.6633333 258.5433333 0.035060579 0.86266527 0.56276833 3 4 3.5 0.1 dme-miR-1002-5p 6mer3-8 CTACTT 3R 6001037 6001042 - 3R_6001037_6001042_- 0.81071739 0.809029056 0.809873223 0.001193808 Rm62 FBtr0309321|FBtr0078653|FBtr0078650|FBtr0078651|FBtr0302597|FBtr0309322|FBtr0078654|FBtr0309320|FBtr0078649|FBtr0301947|FBtr0078652|FBtr0309319 6000429|6000429|6000429|6000429|6000424|6000429|6000429|6000424|6000429|6000429|6000429|6000429 6003027|6001162|6001162|6001162|6001162|6002635|6001162|6002646|6001162|6001162|6001162|6003646 3R - 6000934 6001232 3'utr Rm62 FlyBase G48505.1 GAGCAACGGACGAGGCTTCGGAGGAGGCGGCGGCGGCGGCGGCGAAGGCAGACACTCGCGCTTCGACTAGATCGCGGACAATTAGATGAGCAGTAAAAGAAGCTATAGGAACAGGAGATTTCAGTAGCTAAACTAAACCGCACTAGGTCCTAAGTTAAATTAAGTTCATAGCTTAAGTTAAGATTTCGTACTACTTTCACCAAACCGCTGACGGTTATTTTTAGACTTAAATTCAGACTCCCTGATTAATGAAACACTACAAAATGCGAGCTATTTGAACATAGCGAATTTATGTTTAA 348 6001037 0.983484194 54 331 2553 0.95754717 2.307496038 0.169811321 0.189655172 0.33490566 348 17 1 406 3R:6000934-6001232 6 Rm62 FBtr0078654|FBtr0309320|FBtr0301947|FBtr0078649|FBtr0309319|FBtr0078652|FBtr0309321|FBtr0078650|FBtr0078651|FBtr0302597|FBtr0078653|FBtr0309322 6000429|6000424|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000424|6000429|6000429 6001162|6002646|6001162|6001162|6003646|6001162|6003027|6001162|6001162|6001162|6001162|6002635 CTACTT 6mer3-8 dme-miR-1002-5p 3R - 6000888 6001190 3'utr Rm62 FlyBase G36612.2 CGAAGGCAGACACTCGCGCTTCGACTAGATCGCGGACAATTAGATGAGCAGTAAAAGAAGCTATAGGAACAGGAGATTTCAGTAGCTAAACTAAACCGCACTAGGTCCTAAGTTAAATTAAGTTCATAGCTTAAGTTAAGATTTCGTACTACTTTCACCAAACCGCTGACGGTTATTTTTAGACTTAAATTCAGACTCCCTGATTAATGAAACACTACAAAATGCGAGCTATTTGAACATAGCGAATTTATGTTTAAATGATTTGTAAGTTATTTGACGCTGGCCGCGAGGTCGGTACAACAC 251 6001037 0.92983781 46 229 1764 0.910994764 1.696481204 0.193717277 0.362549801 0.581151832 251 28 6 348 3R:6000888-6001190 6 129 3965 FBgn0003261 4149.96 168.6633333 258.5433333 0.031084637 0.76483725 0.498949241 -5 -5 -5 0.1 dme-miR-33-5p 6mer3-8 CAATGC 3R 6001604 6001609 - 3R_6001604_6001609_- 1 1 1 0 Rm62 FBtr0309321|FBtr0309322|FBtr0309320|FBtr0309319 6000429|6000429|6000424|6000429 6003027|6002635|6002646|6003646 3R - 6001560 6001646 5'utr Rm62 FlyBase G48507.1 ACACAAAGGGCACCTCTTTCGCCTTCTTCACCAAGAACAATGCCAAGCAAGCCAAGGCGCTGGTCGACGTACTCCGAGAAGCTAATC 19 6001606 0.950158793 9 17 77 0.863636364 1.278753601 0.045454545 0.157894737 0.272727273 19 3 0 19 3R:6001560-6001646 6 Rm62 FBtr0309320|FBtr0309319|FBtr0309321|FBtr0309322 6000424|6000429|6000429|6000429 6002646|6003646|6003027|6002635 CAATGC 6mer3-8 dme-miR-33-5p 3R - 6001570 6001652 5'utr Rm62 FlyBase G36613.1 GATCCAACACAAAGGGCACCTCTTTCGCCTTCTTCACCAAGAACAATGCCAAGCAAGCCAAGGCGCTGGTCGACGTACTCCGA 11 6001620 0.934921823 5 10 38 0.866666667 1.113943352 0.133333333 0.363636364 0.533333333 11 2 0 13 3R:6001570-6001652 6 6.5 3966 FBgn0003261 4149.96 168.6633333 258.5433333 0.00156628 0.038538311 0.025140853 -3 11 4 0.1 dme-miR-1012-3p 7mer-m8 TTGACTA 3R 6001700 6001706 - 3R_6001700_6001706_- 0.552853241 0.524131536 0.538492388 0.020309309 Rm62 FBtr0309321|FBtr0309322|FBtr0309320|FBtr0309319 6000429|6000429|6000424|6000429 6003027|6002635|6002646|6003646 3R - 6001688 6001735 5'utr Rm62 FlyBase G48508.1 CGTGGACGGCATCAAGTATGTCATCAACTTTGACTACCCGCAAAACAG 16 6001706 0.971660604 3 16 96 1 1.230448921 0.176470588 0.0625 0.117647059 16 0 0 17 3R:6001688-6001735 7 Rm62 FBtr0309320|FBtr0309319|FBtr0309321|FBtr0309322 6000424|6000429|6000429|6000429 6002646|6003646|6003027|6002635 TTGACTA 7mer-m8 dme-miR-1012-3p 3R - 6001690 6001734 5'utr Rm62 FlyBase G36614.1 GTGGACGGCATCAAGTATGTCATCAACTTTGACTACCCGCAAAAC 17 6001706 0.974502547 4 16 98 0.913043478 0.84509804 0.130434783 0.294117647 0.47826087 17 0 2 21 3R:6001690-6001734 7 16 3967 FBgn0003261 4149.96 168.6633333 258.5433333 0.003855459 0.094863535 0.061885177 0 0 0 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 6359603 6359608 + 3R_6359603_6359608_+ 0.999995565 1 0.999997783 3.11E-06 Pak FBtr0334543|FBtr0334544|FBtr0081716|FBtr0334539|FBtr0334542|FBtr0081714|FBtr0334540|FBtr0081715|FBtr0334541 6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464 6361614|6361614|6360248|6360248|6361614|6360248|6360248|6360248|6360050 3R + 6359557 6359637 3'utr Pak FlyBase G40562.1 AACACCAACCACAATAGCAACAATAACTGTTATGCATACGAACAGATGATGAATTATTAATGATTATGAGTACTATTATTA 14 6359603 0.974891896 7 14 84 1 1.322219295 0.047619048 0.428571429 0.619047619 14 0 0 21 3R:6359557-6359637 6 Pak FBtr0081715|FBtr0334541|FBtr0081714|FBtr0334540|FBtr0334539|FBtr0334542|FBtr0334543|FBtr0334544|FBtr0081716 6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464 6360248|6360050|6360248|6360248|6360248|6361614|6361614|6361614|6360248 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R + 6359554 6359644 3'utr Pak FlyBase G30615.1 AACAACACCAACCACAATAGCAACAATAACTGTTATGCATACGAACAGATGATGAATTATTAATGATTATGAGTACTATTATTAATTATTT 7 6359603 0.97256129 5 7 48 1 1.079181246 0.083333333 0.571428571 0.75 7 0 0 12 3R:6359554-6359644 6 7 3968 FBgn0267698 1697.123333 60.89666667 93.02666667 0.004124627 0.11494882 0.075247241 0 0 0 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 6360006 6360013 + 3R_6360006_6360013_+ 0.606799204 0.609019369 0.607909287 0.001569918 Pak FBtr0334543|FBtr0334544|FBtr0081716|FBtr0334539|FBtr0334542|FBtr0081714|FBtr0334540|FBtr0081715|FBtr0334541 6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464 6361614|6361614|6360248|6360248|6361614|6360248|6360248|6360248|6360050 3R + 6359958 6360028 3'utr Pak FlyBase G40564.1 CACACACACTATAGTTGTCAACATTAAAACATTAGAATTTGTAACTCTTGCATTTAAAGGAAATGAAAATA 121 6360005 0.767290277 6 120 962 0.993710692 2.198657087 0.528301887 0.223140496 0.408805031 121 1 0 158 3R:6359958-6360028 8 Pak FBtr0081715|FBtr0334541|FBtr0081714|FBtr0334540|FBtr0334539|FBtr0334542|FBtr0334543|FBtr0334544|FBtr0081716 6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464 6360248|6360050|6360248|6360248|6360248|6361614|6361614|6361614|6360248 TGCATTTA 8mer-A1 dme-miR-277-3p 3R + 6359989 6360028 3'utr Pak FlyBase G30616.1 TTAGAATTTGTAACTCTTGCATTTAAAGGAAATGAAAATA 84 6360005 0.751355944 5 84 635 1 2.100370545 0.595238095 0.345238095 0.563492063 84 0 0 126 3R:6359989-6360028 8 100 3969 FBgn0267698 1697.123333 60.89666667 93.02666667 0.058923237 1.642126006 1.074960585 1 1 1 0.1 dme-miR-2a-2-5p 7mer-A1 GATGAGA 3R 6387375 6387381 + 3R_6387375_6387381_+ 0.782768788 0.782810245 0.782789516 2.93E-05 godzilla FBtr0081721|FBtr0081720|FBtr0113198|FBtr0081722 6387311|6387311|6387311|6387311 6388304|6387789|6388304|6388304 3R + 6387282 6387401 stop_codon godzilla FlyBase G40600.1 CAGCGCATCCGATCGCCAGTTTCTCATATGAGGCGAGCTAGTTCGCCGCGAGTCCTTAGCCTGTAGGTTGTAGGTGGTCGTCGATCCTTGAGAGATGAGACATGAGCCCAGCCTGGGTAC 171 6387377 0.959577819 14 166 776 0.970588235 1.819543936 0.416666667 0.152046784 0.289215686 171 4 2 198 3R:6387282-6387401 7 godzilla FBtr0081722|FBtr0113198|FBtr0081720|FBtr0081721 6387311|6387311|6387311|6387311 6388304|6388304|6387789|6388304 GATGAGA 7mer-A1 dme-miR-2a-2-5p 3R + 6387292 6387402 stop_codon godzilla FlyBase G30640.1 GATCGCCAGTTTCTCATATGAGGCGAGCTAGTTCGCCGCGAGTCCTTAGCCTGTAGGTTGTAGGTGGTCGTCGATCCTTGAGAGATGAGACATGAGCCCAGCCTGGGTACG 132 6387377 0.950809593 13 130 640 0.981220657 2.320146286 0.408450704 0.431818182 0.647887324 132 4 0 209 3R:6387292-6387402 7 99 3970 FBgn0037442 1202.333333 48.23 73.77 0.082339895 2.052664317 1.342008947 -2 -2 -2 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3R 6387608 6387614 + 3R_6387608_6387614_+ 0.521223854 0.521223853 0.521223854 0 godzilla FBtr0081721|FBtr0081720|FBtr0113198|FBtr0081722 6387311|6387311|6387311|6387311 6388304|6387789|6388304|6388304 3R + 6387555 6387641 3'utr godzilla FlyBase G40601.1 AATCCACACAGACACGATACACACACACGCGTCATTTATGTGCGTATAGAAATTGTGATTTATTTTATATACATTTTACAATTAACC 725 6387614 0.991288275 16 718 7646 0.992027335 2.4628969 0.002277904 0.172413793 0.316628702 725 5 2 871 3R:6387555-6387641 7 godzilla FBtr0081722|FBtr0113198|FBtr0081720|FBtr0081721 6387311|6387311|6387311|6387311 6388304|6388304|6387789|6388304 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 6387570 6387632 3'utr godzilla FlyBase G30642.1 GATACACACACACGCGTCATTTATGTGCGTATAGAAATTGTGATTTATTTTATATACATTTTA 452 6387614 0.991809986 15 435 4792 0.958778626 1.651831608 0 0.340707965 0.545038168 452 14 13 628 3R:6387570-6387632 7 585.5 3971 FBgn0037442 1202.333333 48.23 73.77 0.486969781 12.13974705 7.93683069 -6 -6 -6 0.1 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 3R 6387752 6387758 + 3R_6387752_6387758_+ 0.823349562 0.823217603 0.823283583 9.33E-05 godzilla FBtr0081721|FBtr0081720|FBtr0113198|FBtr0081722 6387311|6387311|6387311|6387311 6388304|6387789|6388304|6388304 3R + 6387656 6387779 3'utr godzilla FlyBase G40602.1 CGAAATACAGCCTCGCCGGCAAACTCCCAACCAAAAATGTAAACGATAGATGGAAGAGAAAAAATACCAAGTTACCACATCTAAGATTAAATTGTTTACCTGATTCGCATGAATCTTTGATTCA 34 6387759 0.907605931 15 34 184 1 1.633468456 0.139534884 0.205882353 0.372093023 34 0 0 43 3R:6387656-6387779 7 godzilla FBtr0081722|FBtr0113198|FBtr0081720|FBtr0081721 6387311|6387311|6387311|6387311 6388304|6388304|6387789|6388304 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R + 6387664 6387765 3'utr godzilla FlyBase G30643.1 AGCCTCGCCGGCAAACTCCCAACCAAAAATGTAAACGATAGATGGAAGAGAAAAAATACCAAGTTACCACATCTAAGATTAAATTGTTTACCTGATTCGCAT 19 6387759 0.978322026 6 17 109 0.931034483 1.130333768 0.482758621 0.368421053 0.586206897 19 1 1 27 3R:6387664-6387765 7 12.5 3972 FBgn0037442 1202.333333 48.23 73.77 0.010396451 0.259174787 0.169445574 -7 -7 -7 0.1 dme-miR-282-5p 6mer3-8 AGAGGC 3R 6387952 6387957 + 3R_6387952_6387957_+ 0.99999229 0.93040712 0.965199705 0.049204167 godzilla FBtr0081721|FBtr0113198|FBtr0081722 6387311|6387311|6387311 6388304|6388304|6388304 3R + 6387934 6387974 3'utr godzilla FlyBase G40604.1 AATTAAATCAAATGATTGAGAGGCACTGGCCTGTATATTGT 10 6387960 0.968610025 3 10 55 1 1.113943352 0.153846154 0.3 0.461538462 10 0 0 13 3R:6387934-6387974 6 godzilla FBtr0081722|FBtr0113198|FBtr0081721 6387311|6387311|6387311 6388304|6388304|6388304 AGAGGC 6mer3-8 dme-miR-282-5p 3R + 6387946 6387994 3'utr godzilla FlyBase G30644.1 TGATTGAGAGGCACTGGCCTGTATATTGTACATTATTCTCGTTTTAACT 6 6387960 0.996910192 3 6 49 1 0.77815125 0.166666667 0 0 6 0 0 6 3R:6387946-6387994 6 6 3973 FBgn0037442 1202.333333 48.23 73.77 0.004990297 0.124403898 0.081333876 -8 -8 -8 0.1 dme-miR-318-3p 6mer2-7 CCAGTG 3R 6447767 6447772 + 3R_6447767_6447772_+ 0.876521105 0.613305283 0.744913194 0.186121677 gpp FBtr0303790|FBtr0303789 6445700|6447492 6449274|6448007 3R + 6447606 6447792 3'utr gpp FlyBase G40636.1 CGGATCGGATCCCGGATCCTCGGAATTGTAATGTATTTGATAAAAGATTTTTTGTAATTTTAACTAAATGAATTGTGTATGACTAGCTAACTTATTGTAAGGCCCAGCTCTCCAATTGCCTTGTTTTATTTGATAATTACTATCCAACAGCTCCCCTTTCACCAGTGTGTTTTTATTTCATTAATAA 60 6447771 0.822785208 21 58 501 0.970149254 1.511883361 0.253731343 0.116666667 0.208955224 60 1 1 65 3R:6447606-6447792 6 gpp FBtr0303789|FBtr0303790 6447492|6445700 6448007|6449274 CCAGTG 6mer2-7 dme-miR-318-3p 3R + 6447749 6447790 3'utr gpp FlyBase G30671.1 CCAACAGCTCCCCTTTCACCAGTGTGTTTTTATTTCATTAAT 13 6447772 0.735392747 5 12 139 0.954545455 1.322219295 0 0.461538462 0.681818182 13 1 0 21 3R:6447749-6447790 6 14 3974 FBgn0264495 828.5133333 12.03333333 18.53 0.016897737 1.163434903 0.75553157 -4 -5 -4.5 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 6447860 6447865 + 3R_6447860_6447865_+ 0.999999982 0.994658471 0.997329227 0.003777011 gpp FBtr0303790|FBtr0303789 6445700|6447492 6449274|6448007 3R + 6447836 6447906 3'utr gpp FlyBase G40637.1 TGAACCGGAAAAACGCAACTGCGCTGATGAACAATGTTACTGATTTCTTTGTACCGATTACCAATTACTAT 47 6447855 0.976736682 12 44 277 0.947368421 1.73239376 0.105263158 0.170212766 0.315789474 47 3 0 54 3R:6447836-6447906 6 gpp FBtr0303789|FBtr0303790 6447492|6445700 6448007|6449274 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R + 6447824 6447905 3'utr gpp FlyBase G30672.1 ACTTTATAACGTTGAACCGGAAAAACGCAACTGCGCTGATGAACAATGTTACTGATTTCTTTGTACCGATTACCAATTACTA 41 6447855 0.998770437 12 40 211 1 1.812913357 0.215384615 0.390243902 0.615384615 41 0 0 65 3R:6447824-6447905 6 33.5 3975 FBgn0264495 828.5133333 12.03333333 18.53 0.04043387 2.783933518 1.807879115 5 5 5 0.1 dme-miR-7-5p 6mer2-7 TCTTCC 3R 6451458 6451463 - 3R_6451458_6451463_- 0.999984787 0.999743347 0.999864067 0.000170766 CG9727 FBtr0330193 6449942 6451848 3R - 6451310 6451483 3'utr CG9727 FlyBase G48570.1 AAACCCTCAACAAAATCCAATCTTCCCTCTGTTTAAACTAATCAACAGCTTAACTGTGCCTCTTATTGGTTTCAAAAGTGTCCAACATCATTAGAGGTGTGAGCTTGAGCCGACTTCTTTAATCTAACGTTACCCTCAGGCCTTGTTGTATGTATGCAATTGGCATATTGTTAT 23 6451461 0.976584383 13 23 157 1 1.414973348 0.038461538 0.130434783 0.230769231 23 0 0 26 3R:6451310-6451483 6 CG9727 FBtr0330193 6449942 6451848 TCTTCC 6mer2-7 dme-miR-7-5p 3R - 6451395 6451476 3'utr CG9727 FlyBase G36653.1 CAACAAAATCCAATCTTCCCTCTGTTTAAACTAATCAACAGCTTAACTGTGCCTCTTATTGGTTTCAAAAGTGTCCAACATC 13 6451461 0.984460764 5 13 104 1 1.301029996 0 0.384615385 0.6 13 0 0 20 3R:6451395-6451476 6 9 3976 FBgn0037445 1232.88 23.59333333 36.24666667 0.007299981 0.38146369 0.248298694 -2 -2 -2 0.1 dme-miR-8-3p 7mer-m8 CAGTATT 3R 6656115 6656121 - 3R_6656115_6656121_- 0.645460699 0.658743056 0.652101878 0.009392075 CG1307 FBtr0346140 6656028 6656521 3R - 6656101 6656131 3'utr CG1307 FlyBase G48587.1 TAGCTTCCCACAGTATTTGGTCTATTTCTTT 8 6656114 0.675549767 2 8 67 1 1.113943352 0 0.5 0.692307692 8 0 0 13 3R:6656101-6656131 7 CG1307 FBtr0346140 6656028 6656521 CAGTATT 7mer-m8 dme-miR-8-3p 3R - 6656108 6656141 3'utr CG1307 FlyBase G36663.1 AGATTATATCTAGCTTCCCACAGTATTTGGTCTA 11 6656114 0.665627361 3 11 88 1 1.342422681 0.090909091 0.636363636 0.818181818 11 0 0 22 3R:6656108-6656141 7 9.5 3977 FBgn0026566 301 40.07666667 61.29666667 0.031561462 0.237045662 0.154983958 -7 -7 -7 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 6656385 6656390 - 3R_6656385_6656390_- 0.999997622 0.999999998 0.99999881 1.70E-06 CG1307 FBtr0346140|FBtr0346140|FBtr0346140|FBtr0301623|FBtr0301623|FBtr0301623|FBtr0339933|FBtr0339933|FBtr0339933 6656028|6656028|6656028|6656288|6656288|6656288|6656288|6656288|6656288 6656521|6656521|6656521|6656521|6656521|6656521|6656521|6656521|6656521 3R - 6656357 6656412 3'utr CG1307 FlyBase G48589.2 AAGGCCACCGGGTGGAGGACGACTGTGACATGCAAGCTAAGCTAAGATTTACGTTA 39 6656383 0.817325859 3 37 131 0.977272727 1.33243846 0.431818182 0.102564103 0.204545455 39 0 1 43 3R:6656357-6656412 6 CG1307 FBtr0339933|FBtr0339933|FBtr0339933|FBtr0346140|FBtr0346140|FBtr0346140|FBtr0301623|FBtr0301623|FBtr0301623 6656288|6656288|6656288|6656028|6656028|6656028|6656288|6656288|6656288 6656521|6656521|6656521|6656521|6656521|6656521|6656521|6656521|6656521 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 6656367 6656412 3'utr CG1307 FlyBase G36665.1 AAGGCCACCGGGTGGAGGACGACTGTGACATGCAAGCTAAGCTAAG 23 6656385 0.755450089 3 23 73 1 1.51851394 0.454545455 0.347826087 0.545454545 23 0 0 33 3R:6656367-6656412 6 30 3978 FBgn0026566 301 40.07666667 61.29666667 0.099667774 0.74856525 0.489423025 -7 -5 -6 0.1 dme-miR-970-3p 6mer3-8 TCTTAT 3R 6659303 6659308 + 3R_6659303_6659308_+ 0.999937438 0.999820226 0.999878832 8.29E-05 twr FBtr0081687 6659291 6659442 3R + 6659260 6659322 stop_codon twr FlyBase G40671.1 TTGGCCATTTTCGTGCTGCTGCATCGGGAGTAGATGGGATCGCTCTTATTTTGTAGGTACAGT 43 6659305 0.970587357 9 42 326 0.980769231 1.707570176 0.115384615 0.162790698 0.307692308 43 1 0 51 3R:6659260-6659322 6 twr FBtr0081687 6659291 6659442 TCTTAT 6mer3-8 dme-miR-970-3p 3R + 6659276 6659383 stop_codon twr FlyBase G30697.2 TGCTGCATCGGGAGTAGATGGGATCGCTCTTATTTTGTAGGTACAGTTTATAAGTAGGAAGTGCACAATCTCGAGCCTGTCTGCATTTTCAAATTCCTTACCACCCCA 31 6659305 0.986210845 9 29 229 0.975609756 1.602059991 0.195121951 0.225806452 0.414634146 31 1 0 40 3R:6659276-6659383 6 31 3979 FBgn0262801 451 66.07666667 100.2333333 0.068736142 0.469151995 0.309278351 -2 -2 -2 0.1 dme-miR-307a-3p 6mer3-8 GGTTGT 3R 7071118 7071123 + 3R_7071118_7071123_+ 0.999999999 0.999880878 0.999940438 8.42E-05 CG1965 FBtr0305315|FBtr0334667 7069195|7068710 7071624|7071624 3R + 7071002 7071129 3'utr CG1965 FlyBase G40693.1 TGAGCTGGCGATTGGAGCCCTTCTGAATCGTTACCTGTTATTAGCTATGCGAGTCTGCACGCCAAACGATGCCATAAACAAAGCTTACATCATTGTAAATACCCTGCCTACAGTCTGGTTGTTACCGA 21 7071101 0.982783051 13 21 157 1 1.447158031 0.464285714 0.19047619 0.392857143 21 0 0 28 3R:7071002-7071129 6 CG1965 FBtr0334667|FBtr0305315 7068710|7069195 7071624|7071624 GGTTGT 6mer3-8 dme-miR-307a-3p 3R + 7071093 7071124 3'utr CG1965 FlyBase G30716.1 ATTGTAAATACCCTGCCTACAGTCTGGTTGTT 5 7071101 0.804742438 2 5 30 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 3R:7071093-7071124 6 5.5 3980 FBgn0037466 426.6666667 16.45666667 25.25333333 0.012890625 0.334211059 0.217793031 17 17 17 0.1 dme-miR-305-3p 6mer2-7 TGTGCC 3R 7077298 7077303 + 3R_7077298_7077303_+ 0.997836305 0.997493022 0.997664664 0.00024275 CG1943 FBtr0334668 7077274 7077981 3R + 7077202 7077341 stop_codon CG1943 FlyBase G40698.1 AACCAGCGGCCACAAATGGAGAGGCACGCGGCCGAGTTCCACCCGGCGGATTCTCGTCGGGCGGATTCTGGTAGAGGGAGGAAGGAGGGAAGGAAGTGTGCCCGGGAGCAGAAGCAGCTGCCAAGCATTTAATGACTCAC 491 7077300 0.927344079 12 469 715 0.972627737 1.823637222 0.386861314 0.097759674 0.191605839 491 8 7 533 3R:7077202-7077341 6 CG1943 FBtr0334668 7077274 7077981 TGTGCC 6mer2-7 dme-miR-305-3p 3R + 7077273 7077411 stop_codon CG1943 FlyBase G30722.1 TAGAGGGAGGAAGGAGGGAAGGAAGTGTGCCCGGGAGCAGAAGCAGCTGCCAAGCATTTAATGACTCACCATCACATCCTCAGACCGACATAAGAATCATAAAACTATAAATATACATAACTCGCTTATAACATACGTA 385 7077300 0.92151699 14 379 672 0.98630137 2.158362492 0.356164384 0.363636364 0.580479452 385 5 3 576 3R:7077273-7077411 6 373.5 3981 FBgn0037468 4211.24 509.6133333 779.24 0.088691217 0.73290861 0.479313177 -2 -2 -2 0.1 dme-miR-986-5p 6mer3-8 ATTCGA 3R 7077895 7077900 + 3R_7077895_7077900_+ 0.728045937 0.717567228 0.722806583 0.00740956 CG1943 FBtr0334668 7077274 7077981 3R + 7077892 7077998 3'utr CG1943 FlyBase G40700.1 ACAATTCGATTTGGTCACGAAATTAATTCTAGTATTTATTACAATTCAGTTTAATTTGACAAGGTCCATCAATTTATCGTCGAACTTGATAAAGCGCATTTCTAAAT 91 7077902 0.98204002 11 84 636 0.932773109 1.267171728 0.033613445 0.230769231 0.411764706 91 3 5 111 3R:7077892-7077998 6 CG1943 FBtr0334668 7077274 7077981 ATTCGA 6mer3-8 dme-miR-986-5p 3R + 7077891 7077988 3'utr CG1943 FlyBase G30724.1 TACAATTCGATTTGGTCACGAAATTAATTCTAGTATTTATTACAATTCAGTTTAATTTGACAAGGTCCATCAATTTATCGTCGAACTTGATAAAGCGC 42 7077902 0.981940434 9 41 305 0.982758621 1.755874856 0 0.285714286 0.482758621 42 1 0 57 3R:7077891-7077988 6 57.5 3982 FBgn0037468 4211.24 509.6133333 779.24 0.013653936 0.112830643 0.073789847 -7 -7 -7 0.1 dme-miR-965-3p 7mer-m8 TACGCTT 3R 7088652 7088658 + 3R_7088652_7088658_+ 0.620204844 0.620204438 0.620204641 2.83E-07 alphaTub84B FBtr0081639 7088582 7088839 3R + 7088590 7088691 3'utr alphaTub84B FlyBase G40713.1 CGCCACTTCAACGCTCGATGGGAGCGTCATTGGTGGGCGGGGTAACCGTCGAAATCAGTGTTTACGCTTCCAATCGCAACAAAAAATTCACTGCAACACTGA 27 7088651 0.787850221 12 25 138 0.967741935 1.477121255 0.225806452 0.148148148 0.258064516 27 1 0 30 3R:7088590-7088691 7 alphaTub84B FBtr0081639 7088582 7088839 TACGCTT 7mer-m8 dme-miR-965-3p 3R + 7088620 7088664 3'utr alphaTub84B FlyBase G30737.1 TGGTGGGCGGGGTAACCGTCGAAATCAGTGTTTACGCTTCCAATC 8 7088651 0.741372395 4 8 47 1 1.041392685 0.090909091 0.375 0.545454545 8 0 0 11 3R:7088620-7088664 7 10 3983 FBgn0003884 10969.09667 757.73 1153.946667 0.000911652 0.013197313 0.008665912 1 1 1 0.1 dme-miR-8-3p 6mer2-7 AGTATT 3R 7088733 7088738 + 3R_7088733_7088738_+ 0.999942072 0.998216485 0.999079278 0.001220183 alphaTub84B FBtr0081639 7088582 7088839 3R + 7088711 7088840 3'utr alphaTub84B FlyBase G40714.1 AAGATTGTACGAGAAACCATAAAGTATTTTATCCACAAAGACACGTATAGCAGAAAAGCCAAGTTAACTCGGCGATAAGTTGTGTACACAAGAATAAAATCGGCCAGATTCAGTGTTGTCAGAAATAAGA 95 7088739 0.829249804 18 90 530 0.96031746 1.781755375 0.174603175 0.2 0.396825397 95 4 1 121 3R:7088711-7088840 6 alphaTub84B FBtr0081639 7088582 7088839 AGTATT 6mer2-7 dme-miR-8-3p 3R + 7088715 7088836 3'utr alphaTub84B FlyBase G30738.1 TTGTACGAGAAACCATAAAGTATTTTATCCACAAAGACACGTATAGCAGAAAAGCCAAGTTAACTCGGCGATAAGTTGTGTACACAAGAATAAAATCGGCCAGATTCAGTGTTGTCAGAAAT 52 7088739 0.965984233 13 49 290 0.961038961 1.86923172 0.142857143 0.365384615 0.571428571 52 3 0 74 3R:7088715-7088836 6 42.5 3984 FBgn0003884 10969.09667 757.73 1153.946667 0.003874521 0.05608858 0.036830125 -6 -6 -6 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 7097964 7097971 - 3R_7097964_7097971_- 0.625359766 0.625362899 0.625361332 2.19E-06 Alh FBtr0334672|FBtr0081613|FBtr0081612|FBtr0113200|FBtr0334677|FBtr0081614|FBtr0334673 7097681|7097681|7097681|7097681|7097681|7097681|7097681 7098310|7098310|7098310|7098310|7098310|7098310|7098310 3R - 7097949 7098053 3'utr Alh FlyBase G48633.2 AAATAATGTACATATATACATACACAGCTGTAAATCAAATTACAGATTGTTGCACAAAAGCAGTGATTGAGAAATTATCCATTGCATTTATCGACTACATTGACA 94 7097972 0.80524409 11 93 737 0.973913043 2.049218023 0.252173913 0.170212766 0.32173913 94 3 0 112 3R:7097949-7098053 8 Alh FBtr0334673|FBtr0334677|FBtr0081614|FBtr0081612|FBtr0113200|FBtr0334672|FBtr0081613 7097681|7097681|7097681|7097681|7097681|7097681|7097681 7098310|7098310|7098310|7098310|7098310|7098310|7098310 TGCATTTA 8mer-A1 dme-miR-277-3p 3R - 7097947 7098012 3'utr Alh FlyBase G36708.1 ACAGATTGTTGCACAAAAGCAGTGATTGAGAAATTATCCATTGCATTTATCGACTACATTGACAAC 68 7097972 0.772359325 9 64 524 0.962962963 1.716003344 0.25 0.411764706 0.62962963 68 3 1 104 3R:7097947-7098012 8 65 3985 FBgn0261238 489.5366667 11.73666667 17.96333333 0.132778614 5.538199375 3.618482093 1 1 1 0.1 dme-miR-1006-3p 6mer2-7 GAATTT 3R 7126736 7126741 - 3R_7126736_7126741_- 0.999936627 0.999956613 0.99994662 1.41E-05 CG10068 FBtr0081611 7126269 7126771 3R - 7126705 7126756 3'utr CG10068 FlyBase G48646.1 AATTAATGTGAAAATGAATTTGTATCTCGCTGTATCTGAATAATTTCTAACT 20 7126736 0.903672223 7 19 173 0.958333333 1.361727836 0.333333333 0.2 0.333333333 20 1 0 23 3R:7126705-7126756 6 CG10068 FBtr0081611 7126269 7126771 GAATTT 6mer2-7 dme-miR-1006-3p 3R - 7126707 7126760 3'utr CG10068 FlyBase G36713.1 GGTCAATTAATGTGAAAATGAATTTGTATCTCGCTGTATCTGAATAATTTCTAA 8 7126726 0.983427133 6 8 65 1 1 0.3 0.25 0.4 8 0 0 10 3R:7126707-7126760 6 12.5 3986 FBgn0037473 157.0666667 11.75666667 18.12 0.079584041 1.063226538 0.689845475 -5 -15 -10 0.1 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3R 7184145 7184151 - 3R_7184145_7184151_- 0.620203295 0.620185031 0.620194163 1.29E-05 CG10055 FBtr0081605 7184099 7184593 3R - 7184126 7184288 3'utr CG10055 FlyBase G48673.1 ACTTCGATTATAATTACACATACAAGTAAATCAGAACTTTAGCATTTAGTATGGCATTAGAGTATGAAACATTTGAATTTTGAATTCTGAAAAGCGAAATCTAGTTGTGCATTTGTATATACATCTATCGATATTGTTGGTGCTGCAAGCAAAGAAAACAAAA 34 7184152 0.975699461 20 33 221 1 1.602059991 0.2 0.147058824 0.275 34 0 0 40 3R:7184126-7184288 7 CG10055 FBtr0081605 7184099 7184593 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3R - 7184109 7184166 3'utr CG10055 FlyBase G36734.1 ATCTATCGATATTGTTGGTGCTGCAAGCAAAGAAAACAAAATATGAATAAAATAAAAT 12 7184152 0.980778745 4 12 83 1 1.204119983 0.4375 0.25 0.4375 12 0 0 16 3R:7184109-7184166 7 14 3987 FBgn0037482 992.8933333 50.03666667 76.9 0.014100205 0.279794817 0.182054616 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 7194832 7194838 + 3R_7194832_7194838_+ 0.775422577 0.658463154 0.716942866 0.082702785 lap FBtr0305153|FBtr0305153|FBtr0305153 7194510|7194510|7194510 7195358|7195358|7195358 3R + 7194794 7194843 3'utr lap FlyBase G40755.1 GGAAAAAAGTATTTAATGTGTGTTTCATGTGATAACTGTGTGATAACTAT 6 7194829 0.989990095 4 5 45 0.9 0.653212514 0.1 0.333333333 0.6 6 0 1 9 3R:7194794-7194843 7 lap FBtr0305153|FBtr0305153|FBtr0305153 7194510|7194510|7194510 7195358|7195358|7195358 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 7194810 7194843 3'utr lap FlyBase G30764.1 TGTGTGTTTCATGTGATAACTGTGTGATAACTAT 5 7194830 0.97987106 3 5 40 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 3R:7194810-7194843 7 5 3988 FBgn0086372 620.47 21.26666667 32.51 0.008058407 0.235109718 0.153798831 3 2 2.5 0.1 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 7486790 7486795 - 3R_7486790_7486795_- 0.999861304 0.68891673 0.844389017 0.219871035 alpha-Est10 FBtr0305910|FBtr0305911|FBtr0289953 7486581|7486581|7486581 7486829|7486829|7486829 3R - 7486752 7486802 3'utr alpha-Est10 FlyBase G48700.1 TAGCTTTAGCTGTCTCAATTCCATGGATTTGGATAATCGTAATTAGTGTAA 6 7486784 0.993696578 6 6 52 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 3R:7486752-7486802 6 alpha-Est10 FBtr0305911|FBtr0289953|FBtr0305910 7486581|7486581|7486581 7486829|7486829|7486829 AGCTGT 6mer3-8 dme-miR-1008-3p 3R - 7486753 7486803 3'utr alpha-Est10 FlyBase G36757.1 ATAGCTTTAGCTGTCTCAATTCCATGGATTTGGATAATCGTAATTAGTGTA 5 7486797 0.99272884 3 4 43 0.888888889 0.903089987 0 0.6 0.777777778 5 1 0 8 3R:7486753-7486803 6 3.5 3989 FBgn0015569 251.6666667 14.93333333 22.87 0.013907285 0.234375 0.153038916 -11 2 -4.5 0.1 dme-miR-304-5p 6mer3-8 TGAGAT 3R 7494275 7494280 - 3R_7494275_7494280_- 0.595600644 0.571049875 0.58332526 0.017359966 alpha-Est9 FBtr0302354|FBtr0302355 7494095|7493919 7495070|7495070 3R - 7494257 7494289 3'utr alpha-Est9 FlyBase G48705.1 TTGAGTTTTTGAGATGTATATTTAACTGAAACT 5 7494268 0.685217547 3 4 42 1 0.698970004 0.6 0 0 5 0 0 5 3R:7494257-7494289 6 alpha-Est9 FBtr0302355|FBtr0302354 7493919|7494095 7495070|7495070 TGAGAT 6mer3-8 dme-miR-304-5p 3R - 7494231 7494279 3'utr alpha-Est9 FlyBase G36759.1 GAGATGTATATTTAACTGAAACTACTAGTTAACCGTAACCAATTTATTT 5 7494268 0.982104969 4 5 34 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 3R:7494231-7494279 5 3.5 3990 FBgn0015577 852.0066667 30.18666667 46.17 0.004107949 0.11594523 0.075806801 -12 -12 -12 0.1 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 7494731 7494738 - 3R_7494731_7494738_- 0.572290333 0.625057233 0.598673783 0.037311833 alpha-Est9 FBtr0302354|FBtr0302355 7494095|7493919 7495070|7495070 3R - 7494720 7494844 3'utr alpha-Est9 FlyBase G48710.1 TGCCCAACAGACTTATTTTTGGCAAGAATGATAAGTGAACCCACCCTAACCTTTTACGATTGGAAAAGCTTTACGTTGAAGCCTATGTTTGAAACAATGCAAAGCGTAGCTTTAGACATAAAATA 29 7494733 0.775250315 13 25 159 0.871794872 1.054357662 0.153846154 0.275862069 0.461538462 29 3 2 34 3R:7494720-7494844 8 alpha-Est9 FBtr0302355|FBtr0302354 7493919|7494095 7495070|7495070 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R - 7494680 7494749 3'utr alpha-Est9 FlyBase G36761.1 AATGCAAAGCGTAGCTTTAGACATAAAATATGAGAGTTTATTGTTAAGTTTGTCAACGAGAAGAAGAGTT 13 7494733 0.978001703 4 9 64 0.789473684 1.176091259 0.157894737 0.307692308 0.526315789 13 4 0 15 3R:7494680-7494749 8 11 3991 FBgn0015577 852.0066667 30.18666667 46.17 0.012910697 0.364399293 0.238249946 -5 -5 -5 0.1 dme-miR-92b-3p 7mer-m1 TGCAATT 3R 7519662 7519668 - 3R_7519662_7519668_- 0.765586663 0.765586663 0.765586663 0 alpha-Est7 FBtr0081550 7519561 7519750 3R - 7519642 7519730 3'utr alpha-Est7 FlyBase G48721.1 CAGCCTAACAAAGAAGTCTCTAGAAACTGTAAATAGGTCAAAATGCTTTATAAAATATATTCTGCAATTGGATTGTTTTGCTTTATAAC 41 7519680 0.818083473 13 39 298 0.96 1.380211242 0.06 0.219512195 0.36 41 1 1 48 3R:7519642-7519730 7 alpha-Est7 FBtr0081550 7519561 7519750 TGCAATT 7mer-m1 dme-miR-92b-3p 3R - 7519614 7519734 3'utr alpha-Est7 FlyBase G36770.1 TGTACAGCCTAACAAAGAAGTCTCTAGAAACTGTAAATAGGTCAAAATGCTTTATAAAATATATTCTGCAATTGGATTGTTTTGCTTTATAACTAGTTTGCCCAATGATTGCATGTGGATG 28 7519682 0.982265086 12 27 210 1 1.612783857 0.097560976 0.25 0.487804878 28 0 0 41 3R:7519614-7519734 7 7.5 3992 FBgn0015575 416.1433333 24.78333333 37.7 0.018022636 0.30262273 0.198938992 12 14 13 0.1 dme-miR-34-5p 7mer-m8 CACTGCC 3R 7857595 7857601 - 3R_7857595_7857601_- 0.708953382 0.708953379 0.708953381 0 CG17816 FBtr0333829|FBtr0113202 7855585|7855580 7858911|7858173 3R - 7857585 7857611 3'utr CG17816 FlyBase G48753.1 AAGACACTTTCACTGCCTGAACCCAAT 6 7857594 0.904793495 3 6 25 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 3R:7857585-7857611 7 CG17816 FBtr0113202|FBtr0333829 7855580|7855585 7858173|7858911 CACTGCC 7mer-m8 dme-miR-34-5p 3R - 7857586 7857611 3'utr CG17816 FlyBase G36796.1 AAGACACTTTCACTGCCTGAACCCAA 5 7857594 0.941084292 2 4 19 0.818181818 0.954242509 0.181818182 0.8 0.909090909 5 2 0 9 3R:7857586-7857611 7 5.5 3993 FBgn0037525 90 2.533333333 3.903333333 0.061111111 2.171052632 1.409052092 -7 -7 -7 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 7916011 7916016 + 3R_7916011_7916016_+ 0.999999679 1 0.999999839 2.12E-07 CG2678 FBtr0304703 7915277 7916550 3R + 7915987 7916040 3'utr CG2678 FlyBase G40816.1 ATCGCCAACATCATCTTAAAAAATGTACCTATTGTTCCGAGGAGTTCAAAACAG 20 7916010 0.855888185 5 20 173 1 1.361727836 0.130434783 0.15 0.260869565 20 0 0 23 3R:7915987-7916040 6 CG2678 FBtr0304703 7915277 7916550 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 7915992 7916039 3'utr CG2678 FlyBase G30806.1 CAACATCATCTTAAAAAATGTACCTATTGTTCCGAGGAGTTCAAAACA 9 7916010 0.803827853 4 9 66 1 1.176091259 0.133333333 0.222222222 0.533333333 9 0 0 15 3R:7915992-7916039 6 14.5 3994 FBgn0014931 371 24.70666667 37.91 0.039083558 0.586886131 0.382484832 1 1 1 0.1 dme-miR-283-5p 6mer3-8 TGATAT 3R 7916757 7916762 - 3R_7916757_7916762_- 0.999992514 0.9999986 0.999995557 4.31E-06 CG10445 FBtr0304704 7916597 7916927 3R - 7916700 7916813 3'utr CG10445 FlyBase G48777.1 CAATTGTGTATTAATACTACACAGACTACCTTTAACGTTATACGTTACATTTGATATAGTCGCACGTCCATAAAGCATAAAGCATATATATTCCCTTTTTTTCTATATTAAGAA 67 7916757 0.969975107 12 65 373 0.974025974 1.574031268 0.402597403 0.119402985 0.233766234 67 1 1 75 3R:7916700-7916813 6 CG10445 FBtr0304704 7916597 7916927 TGATAT 6mer3-8 dme-miR-283-5p 3R - 7916723 7916798 3'utr CG10445 FlyBase G36818.1 ACTACACAGACTACCTTTAACGTTATACGTTACATTTGATATAGTCGCACGTCCATAAAGCATAAAGCATATATAT 41 7916757 0.815368837 7 38 216 0.949152542 1.447158031 0.288135593 0.243902439 0.474576271 41 2 1 56 3R:7916723-7916798 6 45.5 3995 FBgn0037531 329.1333333 12.96 20.04666667 0.138241847 3.510802469 2.269704024 -5 -5 -5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 3R 7916841 7916847 - 3R_7916841_7916847_- 0.671792317 0.67179608 0.671794198 2.69E-06 CG10445 FBtr0304704 7916597 7916927 3R - 7916823 7916853 3'utr CG10445 FlyBase G48778.1 AATTTCACCAAAGTGTTTTTTAACGGATTGA 13 7916835 0.626213475 4 13 121 1 1.176091259 0 0.076923077 0.2 13 0 0 15 3R:7916823-7916853 7 CG10445 FBtr0304704 7916597 7916927 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 7916815 7916857 3'utr CG10445 FlyBase G36819.1 TTACAATTTCACCAAAGTGTTTTTTAACGGATTGAATTCGTTT 9 7916838 0.862477825 5 7 76 1 1.079181246 0 0.333333333 0.5 9 0 0 12 3R:7916815-7916857 7 9.5 3996 FBgn0037531 329.1333333 12.96 20.04666667 0.028863682 0.733024691 0.473894247 -12 -9 -10.5 0.1 dme-miR-1008-3p 7mer-m8 AGCTGTG 3R 8005344 8005350 + 3R_8005344_8005350_+ 0.671795761 0.671795641 0.671795701 1.41E-07 CG2698 FBtr0335228|FBtr0308075|FBtr0335225|FBtr0335226|FBtr0081784 8005015|8003875|8005283|8005283|8005283 8005719|8005719|8005719|8005719|8005719 3R + 8005300 8005428 3'utr CG2698 FlyBase G40847.1 AAACTACGAATTTCCTTTTAATACTCGAACTGCGAACTAACATAAGCTGTGTGGCCAAATACCTGACAATCAAAATGAGATTGGCCCGAATATCATAACCTAGACATAGGCTGGAGCTTCCTTTAACTA 55 8005351 0.956982528 12 52 248 0.9375 1.176091259 0.03125 0.163636364 0.28125 55 1 3 60 3R:8005300-8005428 7 CG2698 FBtr0081784|FBtr0335225|FBtr0335226|FBtr0335228|FBtr0308075 8005283|8005283|8005283|8005015|8003875 8005719|8005719|8005719|8005719|8005719 AGCTGTG 7mer-m8 dme-miR-1008-3p 3R + 8005315 8005390 3'utr CG2698 FlyBase G30831.1 TTTTAATACTCGAACTGCGAACTAACATAAGCTGTGTGGCCAAATACCTGACAATCAAAATGAGATTGGCCCGAAT 39 8005351 0.956495156 10 36 170 0.93877551 1.361727836 0 0.230769231 0.387755102 39 2 1 46 3R:8005315-8005390 7 31.5 3997 FBgn0037536 142.6833333 5.336666667 8.11 0.220768602 5.902560899 3.884093711 -7 -7 -7 0.1 dme-miR-184-3p 6mer3-8 TCCGTC 3R 8005499 8005504 + 3R_8005499_8005504_+ 0.999987681 0.999984127 0.999985904 2.55E-06 CG2698 FBtr0335228|FBtr0308075|FBtr0335225|FBtr0335226|FBtr0081784 8005015|8003875|8005283|8005283|8005283 8005719|8005719|8005719|8005719|8005719 3R + 8005474 8005526 3'utr CG2698 FlyBase G40848.1 TGATTTTTATGATATTATTCAATATTCCGTCTATGCAGCAAGCGCTCCTTAAT 206 8005498 0.764296872 9 196 1633 0.976095618 1.91204483 0.262948207 0.180487805 0.330677291 205 4 2 245 3R:8005474-8005526 6 CG2698 FBtr0081784|FBtr0335225|FBtr0335226|FBtr0335228|FBtr0308075 8005283|8005283|8005283|8005015|8003875 8005719|8005719|8005719|8005719|8005719 TCCGTC 6mer3-8 dme-miR-184-3p 3R + 8005475 8005527 3'utr CG2698 FlyBase G30833.1 GATTTTTATGATATTATTCAATATTCCGTCTATGCAGCAAGCGCTCCTTAATA 164 8005498 0.744289014 6 159 1264 0.9765625 2.397940009 0.22265625 0.417177914 0.62890625 163 6 0 250 3R:8005475-8005527 6 178 3998 FBgn0037536 142.6833333 5.336666667 8.11 1.247517813 33.35415365 21.94821208 1 1 1 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 8005565 8005570 + 3R_8005565_8005570_+ 0.999770373 0.998447975 0.999109174 0.000935078 CG2698 FBtr0335228|FBtr0308075|FBtr0335225|FBtr0335226|FBtr0081784 8005015|8003875|8005283|8005283|8005283 8005719|8005719|8005719|8005719|8005719 3R + 8005534 8005677 3'utr CG2698 FlyBase G40848.2 CTATCGATCTTAGTGTTCTTACATACAAAATGTACCTCGAATTATTTGTAGTCGCGAAACATTTCCAAAGCCTTCAAGTACCGATATCGTGCTCGCTACTAATTGCTTAATGTAAAATTGTGATGTGTTTAAACTTAGATACAA 272 8005564 0.895979704 21 260 2110 0.951219512 1.649056554 0.082317073 0.172794118 0.31402439 272 10 6 312 3R:8005534-8005677 6 CG2698 FBtr0081784|FBtr0335225|FBtr0335226|FBtr0335228|FBtr0308075 8005283|8005283|8005283|8005015|8003875 8005719|8005719|8005719|8005719|8005719 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 8005539 8005608 3'utr CG2698 FlyBase G30833.2 GATCTTAGTGTTCTTACATACAAAATGTACCTCGAATTATTTGTAGTCGCGAAACATTTCCAAAGCCTTC 161 8005564 0.889520069 12 158 1043 0.991701245 2.378397901 0.037344398 0.354037267 0.56846473 161 2 0 239 3R:8005539-8005608 6 161 3999 FBgn0037536 142.6833333 5.336666667 8.11 1.128372854 30.1686446 19.85203453 1 1 1 0.1 dme-miR-79-3p 6mer3-8 TAGCTT 3R 8011031 8011036 - 3R_8011031_8011036_- 0.998530077 0.999999405 0.999264741 0.001038952 CG10435 FBtr0081820 8010905 8011108 3R - 8011002 8011087 3'utr CG10435 FlyBase G48808.1 TGTACGGCCGGCTTTTACCCCCATGCCCAAACTCCGCAATCCCACCCCAATTAGCTTACAAAGATGACTCCTCTAAACGTATATTT 17 8011037 0.922857619 9 16 85 1 1.397940009 0.08 0.235294118 0.48 17 0 0 25 3R:8011002-8011087 6 CG10435 FBtr0081820 8010905 8011108 TAGCTT 6mer3-8 dme-miR-79-3p 3R - 8010999 8011039 3'utr CG10435 FlyBase G36840.1 AATTAGCTTACAAAGATGACTCCTCTAAACGTATATTTAAT 11 8011023 0.764027289 3 10 73 0.941176471 0.903089987 0 0.272727273 0.529411765 11 0 1 16 3R:8010999-8011039 6 9 4000 FBgn0037539 188.4766667 12.81 19.71666667 0.047751269 0.702576112 0.45646661 1 -13 -6 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 8036608 8036615 + 3R_8036608_8036615_+ 0.500118031 0.500118167 0.500118099 1.41E-07 unc-45 FBtr0081788 8036503 8036652 3R + 8036596 8036633 3'utr unc-45 FlyBase G40867.1 AAAATATCAAATGTACTTAACTGTTTTATAAATATTGT 57 8036607 0.861064477 3 57 512 1 1.857332496 0.097222222 0.192982456 0.361111111 57 0 0 72 3R:8036596-8036633 8 unc-45 FBtr0081788 8036503 8036652 GTACTTAA 8mer-A1 dme-miR-252-5p 3R + 8036596 8036632 3'utr unc-45 FlyBase G30845.1 AAAATATCAAATGTACTTAACTGTTTTATAAATATTG 30 8036607 0.850857656 3 30 266 1 1.612783857 0.195121951 0.266666667 0.463414634 30 0 0 41 3R:8036596-8036632 8 43.5 4001 FBgn0010812 498 18.51666667 28.27333333 0.087349398 2.349234923 1.538552228 1 1 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3R 8086044 8086049 + 3R_8086044_8086049_+ 0.999999752 0.788022032 0.894010892 0.14989094 mAChR-B FBtr0344726|FBtr0081789 8085731|8085731 8087049|8087049 3R + 8086021 8086068 3'utr mAChR-B FlyBase G40869.1 AGGGAAGAGTTATCTGTAAGTAGCCAAAGGTGTGTGCTATAGTTAGAA 7 8086051 0.983093597 3 6 44 0.888888889 0.903089987 0 0.285714286 0.444444444 7 1 0 8 3R:8086021-8086068 6 mAChR-B FBtr0081789|FBtr0344726 8085731|8085731 8087049|8087049 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 8086038 8086069 3'utr mAChR-B FlyBase G30847.1 AAGTAGCCAAAGGTGTGTGCTATAGTTAGAAT 5 8086058 0.971068565 3 5 32 1 1 0 0.4 0.7 5 0 0 10 3R:8086038-8086069 6 6 4002 FBgn0037546 7.333333333 0.23 0.36 0.818181818 26.08695652 16.66666667 -7 -14 -10.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 3R 8121526 8121531 + 3R_8121526_8121531_+ 0.999999509 0.999974014 0.999986761 1.80E-05 puc FBtr0081792|FBtr0339722 8121334|8121334 8122294|8122294 3R + 8121515 8121562 3'utr puc FlyBase G40882.2 AAGGAATTTTTTACCTGGCTGAAAAAATTTAGATTTTATTAAGTCAGA 26 8121526 0.683281508 9 23 210 0.90625 1.161368002 0.15625 0.115384615 0.28125 26 2 1 29 3R:8121515-8121562 6 puc FBtr0081792|FBtr0339722 8121334|8121334 8122294|8122294 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 3R + 8121506 8121594 3'utr puc FlyBase G30855.1 ACTGAAACTAAGGAATTTTTTACCTGGCTGAAAAAATTTAGATTTTATTAAGTCAGAAACGGCGAGAGGGCTGATACTTCCTATTAAAC 15 8121530 0.983019731 7 14 107 0.95 1.278753601 0.1 0.333333333 0.5 15 1 0 19 3R:8121506-8121594 6 16.5 4003 FBgn0243512 1835.12 76.61666667 117.5466667 0.008991238 0.215357842 0.140369782 0 -4 -2 0.1 dme-miR-980-3p 6mer2-7 GCAGCT 3R 8121709 8121714 + 3R_8121709_8121714_+ 0.999952552 0.999509678 0.999731115 0.000313178 puc FBtr0081792|FBtr0339722 8121334|8121334 8122294|8122294 3R + 8121640 8121751 3'utr puc FlyBase G40883.1 ATAAAAACGTTCAATATCTGTACATACAAACGTACCTAAAACAAAACACAAGGGAAAGAAATACCAATTGCAGCTTAAACTATGTACTTGCAATACCTTTTAAGAGCTTTTG 101 8121707 0.801135091 13 99 543 0.982905983 2.06069784 0.076923077 0.148514851 0.264957265 101 2 0 115 3R:8121640-8121751 6 puc FBtr0081792|FBtr0339722 8121334|8121334 8122294|8122294 GCAGCT 6mer2-7 dme-miR-980-3p 3R + 8121688 8121746 3'utr puc FlyBase G30857.1 CAAGGGAAAGAAATACCAATTGCAGCTTAAACTATGTACTTGCAATACCTTTTAAGAGC 56 8121707 0.802543346 7 53 288 1 1.908485019 0.024691358 0.303571429 0.518518519 56 0 0 81 3R:8121688-8121746 6 63 4004 FBgn0243512 1835.12 76.61666667 117.5466667 0.03433018 0.822275397 0.53595735 2 2 2 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 3R 8122148 8122153 + 3R_8122148_8122153_+ 0.997851055 0.999873783 0.998862419 0.001430265 puc FBtr0081792|FBtr0339722 8121334|8121334 8122294|8122294 3R + 8122096 8122210 3'utr puc FlyBase G40887.1 TCCGCTATAGCCACTCTAATAGTTTAGTTACTTCTTGAAAGTGAAAAAAGTTTGTGTTTTCTAGTTTTAATTATTTATATGAAGCGAGTGTGTGAGAGGATTATGATTCATTTCG 53 8122147 0.983405532 19 50 439 0.953125 1.785329835 0.234375 0.150943396 0.296875 53 3 0 61 3R:8122096-8122210 6 puc FBtr0081792|FBtr0339722 8121334|8121334 8122294|8122294 TGTGTT 6mer3-8 dme-miR-317-3p 3R + 8122123 8122168 3'utr puc FlyBase G30860.1 TTACTTCTTGAAAGTGAAAAAAGTTTGTGTTTTCTAGTTTTAATTA 6 8122146 0.986585453 4 6 59 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3R:8122123-8122168 6 13 4005 FBgn0243512 1835.12 76.61666667 117.5466667 0.007084005 0.169675876 0.110594374 1 2 1.5 0.1 dme-miR-1003-3p 7mer-A1 TGTGAGA 3R 8122186 8122192 + 3R_8122186_8122192_+ 0.823267844 0.823348702 0.823308273 5.72E-05 puc FBtr0081792|FBtr0339722 8121334|8121334 8122294|8122294 3R + 8122096 8122210 3'utr puc FlyBase G40887.1 TCCGCTATAGCCACTCTAATAGTTTAGTTACTTCTTGAAAGTGAAAAAAGTTTGTGTTTTCTAGTTTTAATTATTTATATGAAGCGAGTGTGTGAGAGGATTATGATTCATTTCG 53 8122184 0.983405532 19 50 439 0.953125 1.785329835 0.234375 0.150943396 0.296875 53 3 0 61 3R:8122096-8122210 7 puc FBtr0081792|FBtr0339722 8121334|8121334 8122294|8122294 TGTGAGA 7mer-A1 dme-miR-1003-3p 3R + 8122171 8122227 3'utr puc FlyBase G30861.1 TATATGAAGCGAGTGTGTGAGAGGATTATGATTCATTTCGTATTAGATCGTAAGTCT 13 8122184 0.959462383 7 13 72 1 1.361727836 0.304347826 0.461538462 0.695652174 13 0 0 23 3R:8122171-8122227 7 17 4006 FBgn0243512 1835.12 76.61666667 117.5466667 0.009263699 0.221883837 0.144623412 2 2 2 0.1 dme-miR-31a-5p 7mer-A1 CTTGCCA 3R 8125187 8125193 + 3R_8125187_8125193_+ 0.823347032 0.823348332 0.823347682 9.19E-07 CG7878 FBtr0113205 8125137 8125273 3R + 8125168 8125217 3'utr CG7878 FlyBase G40902.1 CTAGAGCGCATTGAAGTGCCTTGCCAAAAATTGTTTAACTATTTATCTAT 27 8125189 0.869886937 2 26 202 0.96875 1.491361694 0.0625 0.148148148 0.28125 27 1 0 31 3R:8125168-8125217 7 CG7878 FBtr0113205 8125137 8125273 CTTGCCA 7mer-A1 dme-miR-31a-5p 3R + 8125153 8125215 3'utr CG7878 FlyBase G30869.1 TCTAGTTATAAGAGACTAGAGCGCATTGAAGTGCCTTGCCAAAAATTGTTTAACTATTTATCT 23 8125189 0.981144917 5 21 155 0.972222222 1.544068044 0.111111111 0.391304348 0.611111111 23 1 0 35 3R:8125153-8125215 7 24 4007 FBgn0037549 1708.053333 87.89666667 135.3866667 0.014051083 0.273047897 0.177270041 -2 -2 -2 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3R 8237061 8237066 + 3R_8237061_8237066_+ 0.999882718 0.993819094 0.996850906 0.004287613 DNApol-iota FBtr0339606 8236542 8237389 3R + 8237039 8237076 3'utr DNApol-iota FlyBase G40932.1 ACATATCCTAGCGGCATTCAGTCCAAAGCGGTCTCCCA 6 8237055 0.913980447 2 6 23 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 3R:8237039-8237076 6 DNApol-iota FBtr0339606 8236542 8237389 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 8237036 8237077 3'utr DNApol-iota FlyBase G30890.1 CTTACATATCCTAGCGGCATTCAGTCCAAAGCGGTCTCCCAG 6 8237055 0.942813978 4 5 24 1 0.954242509 0.222222222 0.333333333 0.555555556 6 0 0 9 3R:8237036-8237077 6 5.5 4008 FBgn0037554 325.21 13.97 21.14 0.016912149 0.393700787 0.260170293 6 6 6 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 3R 8237390 8237396 - 3R_8237390_8237396_- 0.620204266 0.620204266 0.620204266 0 Ada2b FBtr0334315|FBtr0081807|FBtr0100368 8236630|8237112|8237112 8237918|8237918|8237437 3R - 8237369 8237410 3'utr Ada2b FlyBase G48853.1 GATTAAGAGCCACATGCATTTCCAAGGACTTCACTTTATTTT 13 8237394 0.985746298 6 9 76 0.714285714 1 0.071428571 0.076923077 0.142857143 13 4 0 10 3R:8237369-8237410 7 Ada2b FBtr0100368|FBtr0081807|FBtr0334315 8237112|8237112|8236630 8237437|8237918|8237918 TGCATTT 7mer-m8 dme-miR-277-3p 3R - 8237375 8237408 3'utr Ada2b FlyBase G36877.1 TTAAGAGCCACATGCATTTCCAAGGACTTCACTT 7 8237395 0.882334126 3 6 40 0.909090909 1 0.090909091 0.428571429 0.636363636 7 1 0 10 3R:8237375-8237408 7 9 4009 FBgn0037555 444.2066667 24.31 37.33666667 0.02026084 0.370218017 0.241049906 -2 -1 -1.5 0.1 dme-miR-14-3p 7mer-m8 AAGACTG 3R 8237527 8237533 - 3R_8237527_8237533_- 0.671795832 0.671795832 0.671795832 0 Ada2b FBtr0334315|FBtr0081807 8236630|8237112 8237918|8237918 3R - 8237471 8237558 3'utr Ada2b FlyBase G48854.1 TACGCCCACCACCTACCTCTCGGTTAAGACTGTCTGCTTGAGCGGAGCACCATCGTTGGGTAGTCCTATGGAGACTTCGCTGCGCAAG 34 8237534 0.946006529 12 30 235 0.880952381 1.568201724 0.119047619 0.205882353 0.357142857 34 5 0 37 3R:8237471-8237558 7 Ada2b FBtr0081807|FBtr0334315 8237112|8236630 8237918|8237918 AAGACTG 7mer-m8 dme-miR-14-3p 3R - 8237473 8237596 3'utr Ada2b FlyBase G36878.1 AGTCACAACGAGCTGGATCTGTGCAAGAAGCATAATATTACGCCCACCACCTACCTCTCGGTTAAGACTGTCTGCTTGAGCGGAGCACCATCGTTGGGTAGTCCTATGGAGACTTCGCTGCGCA 24 8237534 0.983305192 15 18 137 0.75 1.079181246 0.28125 0.25 0.4375 24 7 1 24 3R:8237473-8237596 7 21 4010 FBgn0037555 444.2066667 24.31 37.33666667 0.047275292 0.86384204 0.562449781 1 1 1 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 8237571 8237576 - 3R_8237571_8237576_- 1 0.912943992 0.956471996 0.061557888 Ada2b FBtr0334315|FBtr0081807 8236630|8237112 8237918|8237918 3R - 8237564 8237608 3'utr Ada2b FlyBase G48855.1 AGTGAACTGCTCAGTCACAACGAGCTGGATCTGTGCAAGAAGCAT 5 8237579 0.915807613 3 5 20 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:8237564-8237608 6 Ada2b FBtr0081807|FBtr0334315 8237112|8236630 8237918|8237918 GTGCAA 6mer3-8 dme-miR-92b-3p 3R - 8237473 8237596 3'utr Ada2b FlyBase G36878.1 AGTCACAACGAGCTGGATCTGTGCAAGAAGCATAATATTACGCCCACCACCTACCTCTCGGTTAAGACTGTCTGCTTGAGCGGAGCACCATCGTTGGGTAGTCCTATGGAGACTTCGCTGCGCA 24 8237578 0.983305192 15 18 137 0.75 1.079181246 0.28125 0.25 0.4375 24 7 1 24 3R:8237473-8237596 6 3.5 4011 FBgn0037555 444.2066667 24.31 37.33666667 0.007879215 0.143973673 0.09374163 3 2 2.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 8240818 8240824 - 3R_8240818_8240824_- 0.78983725 0.798334839 0.794086045 0.00600864 CG9636 FBtr0081806|FBtr0081806|FBtr0081806 8240745|8240745|8240745 8242389|8242389|8242389 3R - 8240810 8240850 3'utr CG9636 FlyBase G48864.1 ATTTTATATATATTAATATTATTTTTTGTGATAATTTAAAA 19 8240826 0.616078792 6 17 260 0.913043478 0.84509804 0 0.210526316 0.347826087 19 0 2 21 3R:8240810-8240850 7 CG9636 FBtr0081806|FBtr0081806|FBtr0081806 8240745|8240745|8240745 8242389|8242389|8242389 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 8240804 8240850 3'utr CG9636 FlyBase G36884.1 ATTTTATATATATTAATATTATTTTTTGTGATAATTTAAAAAAGGCA 18 8240827 0.6500114 8 15 242 0.769230769 1 0 0.333333333 0.538461538 18 5 1 20 3R:8240804-8240850 7 18 4012 FBgn0037556 751.8933333 33.43666667 51.34666667 0.023939566 0.538331173 0.350558297 2 3 2.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 8241671 8241676 - 3R_8241671_8241676_- 1 0.999999998 0.999999999 0 CG9636 FBtr0081806|FBtr0081806|FBtr0081806|FBtr0306301|FBtr0306301|FBtr0306301 8240745|8240745|8240745|8240907|8240907|8240907 8242389|8242389|8242389|8242389|8242389|8242389 3R - 8241497 8241752 3'utr CG9636 FlyBase G48870.1 TATGACGACTGGGGTCGCGCCTGCGCTGTGACTTTTCCTTAGTTCCTTACGCAAGCGAATTCAAATCGAACCGTATCTGTGAAAATCGTGAATCTCAAACTCTTGAATGTCCTCGAACAGTATTGTTAAACATACTTCAGTCCCTAGGATCAGACGCAGGTGCGACACCAAAACCGAATTTGGCGCTCAAATAGACTTATTTAGACGTTTTTAGGTACTCGAATTGATAAATTTTGTTGGCCGTGTGCGTGTTTTT 281 8241677 0.826200735 33 269 1838 0.961538462 2.511883361 0.25739645 0.163701068 0.304733728 281 13 0 325 3R:8241497-8241752 6 CG9636 FBtr0081806|FBtr0081806|FBtr0081806|FBtr0306301|FBtr0306301|FBtr0306301 8240745|8240745|8240745|8240907|8240907|8240907 8242389|8242389|8242389|8242389|8242389|8242389 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 8241535 8241777 3'utr CG9636 FlyBase G36887.1 TCTGTTTCCGTTGCCAGTCGTCAATTATGACGACTGGGGTCGCGCCTGCGCTGTGACTTTTCCTTAGTTCCTTACGCAAGCGAATTCAAATCGAACCGTATCTGTGAAAATCGTGAATCTCAAACTCTTGAATGTCCTCGAACAGTATTGTTAAACATACTTCAGTCCCTAGGATCAGACGCAGGTGCGACACCAAAACCGAATTTGGCGCTCAAATAGACTTATTTAGACGTTTTTAGGTAC 190 8241677 0.823370133 28 181 1149 0.944029851 1.925999266 0.291044776 0.315789474 0.514925373 190 13 2 253 3R:8241535-8241777 6 111 4013 FBgn0037556 751.8933333 33.43666667 51.34666667 0.147627323 3.319708902 2.161776162 1 1 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 8241901 8241906 - 3R_8241901_8241906_- 0.846268922 0.785046169 0.815657546 0.043290986 CG9636 FBtr0081806|FBtr0306301 8240745|8240907 8242389|8242389 3R - 8241885 8241991 3'utr CG9636 FlyBase G48872.1 CATACTGTTGCTAGTTGGCCATTGCCACAGGACCTTGAGCCCTCATCGCGCCAATGCCCATGACAAAGACACAAAGACTTTACATACCAAATTAGTTGATAGTTATG 125 8241911 0.726731818 13 117 505 0.954545455 2.167317335 0.077922078 0.144 0.305194805 125 7 0 147 3R:8241885-8241991 6 CG9636 FBtr0081806|FBtr0306301 8240745|8240907 8242389|8242389 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 8241887 8241990 3'utr CG9636 FlyBase G36889.1 ATACTGTTGCTAGTTGGCCATTGCCACAGGACCTTGAGCCCTCATCGCGCCAATGCCCATGACAAAGACACAAAGACTTTACATACCAAATTAGTTGATAGTTA 69 8241911 0.948331186 13 65 258 0.979166667 1.973127854 0.09375 0.31884058 0.510416667 69 2 0 94 3R:8241887-8241990 6 54 4014 FBgn0037556 751.8933333 33.43666667 51.34666667 0.071818698 1.61499352 1.05167489 5 5 5 0.1 dme-miR-307a-3p 6mer3-8 GGTTGT 3R 8262256 8262261 - 3R_8262256_8262261_- 0.999999994 0.999986285 0.99999314 9.69E-06 RpA-70 FBtr0081867 8262118 8262361 3R - 8262237 8262286 3'utr RpA-70 FlyBase G48886.1 ACGTTATTTCCAAATATTGTGAATGGGTTGTTATTCAGCTACGCTTCCCT 157 8262270 0.734602452 7 152 1447 0.965714286 1.449735454 0.057142857 0.108280255 0.2 157 1 5 169 3R:8262237-8262286 6 RpA-70 FBtr0081867 8262118 8262361 GGTTGT 6mer3-8 dme-miR-307a-3p 3R - 8262232 8262292 3'utr RpA-70 FlyBase G36896.1 TTACATACGTTATTTCCAAATATTGTGAATGGGTTGTTATTCAGCTACGCTTCCCTTAATT 86 8262270 0.704613687 9 80 780 0.935483871 1.161368002 0.096774194 0.325581395 0.532258065 86 1 7 116 3R:8262232-8262292 6 119 4015 FBgn0010173 2297.653333 131.1433333 201.0833333 0.051791973 0.907404113 0.591794447 9 9 9 0.1 dme-miR-14-3p 6mer2-7 AGACTG 3R 8302765 8302770 - 3R_8302765_8302770_- 0.999999998 0.999999993 0.999999995 0 nac FBtr0081863 8302684 8302798 3R - 8302745 8302788 3'utr nac FlyBase G48900.1 AAGCTGCCAAAGTAAAGTAGACTGTTTAGGACTCTAGGAGATGT 19 8302763 0.894385741 4 17 124 0.916666667 1.342422681 0.083333333 0.210526316 0.375 19 2 0 22 3R:8302745-8302788 6 nac FBtr0081863 8302684 8302798 AGACTG 6mer2-7 dme-miR-14-3p 3R - 8302741 8302788 3'utr nac FlyBase G36911.1 AAGCTGCCAAAGTAAAGTAGACTGTTTAGGACTCTAGGAGATGTAAGT 20 8302771 0.958973438 7 20 124 1 1.447158031 0.107142857 0.3 0.5 20 0 0 28 3R:8302741-8302788 6 19 4016 FBgn0265351 61.36333333 6.03 9.073333333 0.309631159 3.150912106 2.094048494 -7 1 -3 0.1 dme-miR-304-5p 7mer-A1 GAGATTA 3R 8304539 8304545 - 3R_8304539_8304545_- 0.823349562 0.823349562 0.823349562 0 Sgt1 FBtr0081862 8304188 8304585 3R - 8304514 8304582 3'utr Sgt1 FlyBase G48904.1 AAATGGCCATACTCCTTTATTTATAGAGTCAGCGAGAGAGATTAACAGAGAATAATTACTATAACGTGT 100 8304540 0.791933202 13 86 505 0.876106195 1.217483944 0.185840708 0.12 0.221238938 100 9 5 99 3R:8304514-8304582 7 Sgt1 FBtr0081862 8304188 8304585 GAGATTA 7mer-A1 dme-miR-304-5p 3R - 8304515 8304562 3'utr Sgt1 FlyBase G36912.1 TTATAGAGTCAGCGAGAGAGATTAACAGAGAATAATTACTATAACGTG 66 8304541 0.557150092 6 54 298 0.816326531 1.057991947 0.081632653 0.393939394 0.591836735 66 12 6 80 3R:8304515-8304562 7 79 4017 FBgn0265101 762 87.04666667 133.2433333 0.103674541 0.907559164 0.592900208 -5 -4 -4.5 0.1 dme-miR-2535b-3p 6mer3-8 CCGTGA 3R 8340466 8340471 - 3R_8340466_8340471_- 1 1 1 0 CG9603 FBtr0081855|FBtr0305680 8339942|8339942 8340519|8340519 3R - 8340429 8340625 stop_codon CG9603 FlyBase G48919.1 CGTCGTGGACAACGTGCTCTACCGCGTCACCGTCGCTCTCGCCCTCGTCGGCATCGGTGGCATGGGCAAGCTTTTCTACGAGCTGAGTGTTCCCAAGAAGGAGTGAAGTCGCAGTACCGAACCCTAAGCTAAGCCATTAAACCCCGCGCAAGATCCGTGATTCAGCGTAGTCGCCTTATATTTCAATGTTTTGATTG 119 8340464 0.966881188 17 102 551 0.856115108 1.297395711 0.323741007 0.159663866 0.28057554 119 15 5 119 3R:8340429-8340625 6 CG9603 FBtr0081855|FBtr0305680 8339942|8339942 8340519|8340519 CCGTGA 6mer3-8 dme-miR-2535b-3p 3R - 8340442 8340487 5'utr CG9603 FlyBase G36925.1 AAACCCCGCGCAAGATCCGTGATTCAGCGTAGTCGCCTTATATTTC 64 8340464 0.949002874 6 58 285 0.921052632 1.419129308 0.570175439 0.53125 0.736842105 64 6 3 105 3R:8340442-8340487 6 83 4018 FBgn0040529 1087.99 255.58 391.3733333 0.076287466 0.324751546 0.212073723 -7 -7 -7 0.1 dme-miR-283-5p 8mer-A1 TGATATTA 3R 8352141 8352148 + 3R_8352141_8352148_+ 0.591069802 0.592192292 0.591631047 0.000793727 Atg13 FBtr0081843 8351704 8352817 3R + 8352094 8352153 3'utr Atg13 FlyBase G41016.1 ATATTTATATATGCCATTGTGTTAAGTAGAGTTGATAGGCTGCTATTTGATATTACCCAC 176 8352129 0.675267041 16 167 1457 0.946341463 1.50965048 0.209756098 0.142045455 0.263414634 176 6 5 194 3R:8352094-8352153 8 Atg13 FBtr0081843 8351704 8352817 TGATATTA 8mer-A1 dme-miR-283-5p 3R + 8352085 8352158 3'utr Atg13 FlyBase G30956.1 CCCGCCCTCATATTTATATATGCCATTGTGTTAAGTAGAGTTGATAGGCTGCTATTTGATATTACCCACTATGT 115 8352137 0.888949192 14 110 954 0.956284153 2.243038049 0.224043716 0.382608696 0.612021858 115 8 0 175 3R:8352085-8352158 8 80.5 4019 FBgn0261108 690.5733333 27.67666667 42.22333333 0.116569807 2.908587258 1.906528776 12 4 8 0.1 dme-miR-184-3p 6mer3-8 TCCGTC 3R 8359853 8359858 + 3R_8359853_8359858_+ 0.999999582 0.999996751 0.999998167 1.98E-06 stck FBtr0081846|FBtr0081845|FBtr0081844|FBtr0306260 8359725|8359725|8359725|8359725 8359960|8359964|8359964|8359964 3R + 8359804 8359886 3'utr stck FlyBase G41033.1 ATTTGAGAAACTAAAACCAAACAAACTAAAACCTCTTGTGCATGTCCTTTCCGTCTGTTGTAATCCGGTTGTGTGTAACTTAA 57 8359852 0.991784635 9 50 548 0.914634146 1.273001272 0.402439024 0.245614035 0.475609756 57 4 3 75 3R:8359804-8359886 6 stck FBtr0081846|FBtr0081845|FBtr0081844|FBtr0306260 8359725|8359725|8359725|8359725 8359960|8359964|8359964|8359964 TCCGTC 6mer3-8 dme-miR-184-3p 3R + 8359704 8359865 stop_codon stck FlyBase G30969.1 TGACAATGAAAAAGAACACCTAATGCCTTGGAGCGAGTCTCAGATCCACACCAAACAGTGCCTTTGTCGTTGTAGACCCGCTTTCACTACCATTTTTAACATTTGAGAAACTAAAACCAAACAAACTAAAACCTCTTGTGCATGTCCTTTCCGTCTGTTGTA 63 8359852 0.98422314 12 63 496 1 1.924279286 0.452380952 0.26984127 0.452380952 63 0 0 84 3R:8359704-8359865 6 43 4020 FBgn0020249 375.3333333 31.76 48.60666667 0.114564831 1.353904282 0.884652311 1 1 1 0.1 dme-miR-263a-5p 7mer-m1 TGCCATT 3R 8647637 8647643 - 3R_8647637_8647643_- 0.75988735 0.75905395 0.75947065 0.000589374 Mkk4 FBtr0334320|FBtr0081892 8646170|8647582 8648721|8648721 3R - 8647621 8647658 3'utr Mkk4 FlyBase G48951.1 CGCATATTTATACCATGCCATTCCTGCCCAAAAATATT 60 8647638 0.74574753 3 59 294 0.971830986 1.838849091 0 0.166666667 0.295774648 60 2 0 69 3R:8647621-8647658 7 Mkk4 FBtr0334320|FBtr0081892 8646170|8647582 8648721|8648721 TGCCATT 7mer-m1 dme-miR-263a-5p 3R - 8647613 8647665 3'utr Mkk4 FlyBase G36948.1 GACGTACCGCATATTTATACCATGCCATTCCTGCCCAAAAATATTCACAGCCA 34 8647638 0.924412357 2 34 167 1 1.69019608 0.06122449 0.323529412 0.530612245 34 0 0 49 3R:8647613-8647665 7 47 4021 FBgn0024326 1503.63 65.79666667 100.66 0.03125769 0.714321901 0.466918339 -5 -5 -5 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 3R 8647820 8647825 - 3R_8647820_8647825_- 0.999999998 0.999999993 0.999999996 0 Mkk4 FBtr0334320|FBtr0081892|FBtr0300443 8646170|8647582|8647755 8648721|8648721|8648721 3R - 8647809 8647840 3'utr Mkk4 FlyBase G48953.1 ACAAAAACAAAAGTCATGTGAAAACTACAAAT 7 8647825 0.894502451 3 6 19 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3R:8647809-8647840 6 Mkk4 FBtr0334320|FBtr0081892|FBtr0300443 8646170|8647582|8647755 8648721|8648721|8648721 ATGTGA 6mer3-8 dme-miR-1003-3p 3R - 8647803 8647844 3'utr Mkk4 FlyBase G36950.1 AGCTACAAAAACAAAAGTCATGTGAAAACTACAAATAAAACA 7 8647815 0.928447892 4 7 23 1 1.041392685 0 0.571428571 0.727272727 7 0 0 11 3R:8647803-8647844 6 6.5 4022 FBgn0024326 1503.63 65.79666667 100.66 0.004322872 0.098789199 0.064573813 0 -10 -5 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 8655106 8655111 - 3R_8655106_8655111_- 0.999999747 1 0.999999873 2.12E-07 bel FBtr0334319 8654973 8655784 3R - 8655098 8655138 3'utr bel FlyBase G48974.1 TGAAAGCGCAAATCCTTGAACTTCAATTGATGATTTTAAAC 10 8655111 0.961488311 4 10 84 1 1.113943352 0.076923077 0.3 0.461538462 10 0 0 13 3R:8655098-8655138 6 bel FBtr0334319 8654973 8655784 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R - 8655079 8655127 3'utr bel FlyBase G36964.1 ATCCTTGAACTTCAATTGATGATTTTAAACGAAGAAAACATAAAAATAG 6 8655112 0.983124136 5 6 47 1 0.954242509 0.111111111 0.333333333 0.555555556 6 0 0 9 3R:8655079-8655127 6 7 4023 FBgn0263231 3598.653333 111.0166667 171.27 0.001945172 0.063053596 0.040871139 0 1 0.5 0.1 dme-bantam-3p 7mer-m8 TGATCTC 3R 8714893 8714899 + 3R_8714893_8714899_+ 0.660679026 0.660266506 0.660472766 0.000291682 CG8112 FBtr0343149 8713899 8715263 3R + 8714864 8715219 stop_codon CG8112 FlyBase G41107.2 CAAGGTGGCCGCCTCGCTGGCAGTGTTCATGATCTCCGCTGTGGTCCATGAGCAGGTTCTCGGCTTTGCCCTGCAAATGTTCTTCCCAGTGATGTTCTTCTTCTTTGGGGTCGTGGGTGTTGCCTTGGTATTCCTAATGCGGAGTGCTCCAAAAGTGATGGGCAACATCTTTCTGTGGTTCTCTCTGATCCTGGGAAATGCCACGCTGATCTCACTATACGCCATGGAGCATTACGCCCTAAAGAACTGCAACCTAAGCAACGAGAGTTGGACGTATCGCCTGCTGCCGGCGGTATGGCGCTGCTACAATTAGTCAATTAGTTAAACACTACTTTTAAACTGTCTGTACACAGGGC 207 8714893 0.847350264 51 199 1465 0.966101695 1.880813592 0.25 0.120772947 0.228813559 207 6 2 228 3R:8714864-8715219 7 CG8112 FBtr0343149 8713899 8715263 TGATCTC 7mer-m8 dme-bantam-3p 3R + 8714833 8714984 3'utr CG8112 FlyBase G31014.1 AGGATATGTACACTCATGTGTTCCGAGGTTCCAAGGTGGCCGCCTCGCTGGCAGTGTTCATGATCTCCGCTGTGGTCCATGAGCAGGTTCTCGGCTTTGCCCTGCAAATGTTCTTCCCAGTGATGTTCTTCTTCTTTGGGGTCGTGGGTGTT 65 8714893 0.987779797 16 57 517 0.876404494 1.892094603 0.359550562 0.323076923 0.505617978 65 11 0 78 3R:8714833-8714984 7 64 4024 FBgn0037612 294.1433333 19.15333333 28.95666667 0.217580998 3.341454925 2.210199148 0 0 0 0.1 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 8715319 8715326 - 3R_8715319_8715326_- 0.625364009 0.625364009 0.625364009 0 Cks85A FBtr0081949|FBtr0305339|FBtr0337074 8715198|8715198|8712904 8715436|8715436|8715436 3R - 8715269 8715335 3'utr Cks85A FlyBase G49018.1 AAGAAACCATAGCTTTAGGGTTCAGCTGGGAAGTTCAAAGACACGAAACGAACTGAAGACATCGTTT 25 8715326 0.968230572 8 24 130 0.925925926 1.397940009 0.148148148 0.08 0.148148148 25 2 0 25 3R:8715269-8715335 8 Cks85A FBtr0305339|FBtr0337074|FBtr0081949 8715198|8712904|8715198 8715436|8715436|8715436 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R - 8715284 8715336 3'utr Cks85A FlyBase G36998.1 TAAGAAACCATAGCTTTAGGGTTCAGCTGGGAAGTTCAAAGACACGAAACGAA 15 8715326 0.961883877 4 14 71 0.925925926 1.397940009 0 0.466666667 0.703703704 15 2 0 25 3R:8715284-8715336 8 16.5 4025 FBgn0037613 139.0166667 24.61 37.97 0.118690804 0.670459163 0.434553595 0 0 0 0.1 dme-miR-33-5p 6mer3-8 CAATGC 3R 8715382 8715387 - 3R_8715382_8715387_- 0.960474834 0.939533722 0.950004278 0.014807594 Cks85A FBtr0081949|FBtr0305339|FBtr0337074 8715198|8715198|8712904 8715436|8715436|8715436 3R - 8715341 8715462 stop_codon Cks85A FlyBase G49019.1 AGGCCATCGCGAATCTCTGCGGTTAGGCGGAGGATGCCATGCCGCCGAGGAATGCTCTTCCAAGGACGCACTCGTCAATGCTCACGTAGTATTTCATAAGTTAGCATCAGGCAGCCTGATGT 26 8715384 0.965005246 14 24 127 0.942857143 1.217483944 0.285714286 0.230769231 0.428571429 26 1 1 33 3R:8715341-8715462 6 Cks85A FBtr0305339|FBtr0337074|FBtr0081949 8715198|8712904|8715198 8715436|8715436|8715436 CAATGC 6mer3-8 dme-miR-33-5p 3R - 8715341 8715428 3'utr Cks85A FlyBase G36999.1 TGCCATGCCGCCGAGGAATGCTCTTCCAAGGACGCACTCGTCAATGCTCACGTAGTATTTCATAAGTTAGCATCAGGCAGCCTGATGT 20 8715409 0.9735531 10 19 110 0.942857143 1.51851394 0.371428571 0.5 0.714285714 20 2 0 33 3R:8715341-8715428 6 8 4026 FBgn0037613 139.0166667 24.61 37.97 0.057547057 0.325071109 0.210692652 -3 22 9.5 0.1 dme-miR-7-5p 7mer-A1 TCTTCCA 3R 8715401 8715407 - 3R_8715401_8715407_- 0.735055522 0.822652357 0.778853939 0.061940362 Cks85A FBtr0081949|FBtr0305339|FBtr0337074 8715198|8715198|8712904 8715436|8715436|8715436 3R - 8715341 8715462 stop_codon Cks85A FlyBase G49019.1 AGGCCATCGCGAATCTCTGCGGTTAGGCGGAGGATGCCATGCCGCCGAGGAATGCTCTTCCAAGGACGCACTCGTCAATGCTCACGTAGTATTTCATAAGTTAGCATCAGGCAGCCTGATGT 26 8715384 0.965005246 14 24 127 0.942857143 1.217483944 0.285714286 0.230769231 0.428571429 26 1 1 33 3R:8715341-8715462 7 Cks85A FBtr0305339|FBtr0337074|FBtr0081949 8715198|8712904|8715198 8715436|8715436|8715436 TCTTCCA 7mer-A1 dme-miR-7-5p 3R - 8715341 8715428 3'utr Cks85A FlyBase G36999.1 TGCCATGCCGCCGAGGAATGCTCTTCCAAGGACGCACTCGTCAATGCTCACGTAGTATTTCATAAGTTAGCATCAGGCAGCCTGATGT 20 8715409 0.9735531 10 19 110 0.942857143 1.51851394 0.371428571 0.5 0.714285714 20 2 0 33 3R:8715341-8715428 7 4.5 4027 FBgn0037613 139.0166667 24.61 37.97 0.032370219 0.182852499 0.118514617 -23 2 -10.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 3R 8719929 8719935 + 3R_8719929_8719935_+ 0.823347474 0.823327501 0.823337487 1.41E-05 CG8116 FBtr0300544|FBtr0081905|FBtr0300543 8718041|8718041|8718041 8720339|8720339|8721320 3R + 8719874 8719951 3'utr CG8116 FlyBase G41112.1 CCAGACCTACCGACTGCGCCTGGAGTACTGCCTGTGCACGCTGCAGATCGCCCTTTACCTGACCGAGGTGTGGTATGC 17 8719927 0.964984666 5 17 93 1 1.255272505 0.388888889 0.058823529 0.111111111 17 0 0 18 3R:8719874-8719951 7 CG8116 FBtr0081905|FBtr0300543|FBtr0300544 8718041|8718041|8718041 8720339|8721320|8720339 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R + 8719906 8719947 3'utr CG8116 FlyBase G31019.1 TGTGCACGCTGCAGATCGCCCTTTACCTGACCGAGGTGTGGT 24 8719927 0.747641304 2 23 142 0.973684211 1.568201724 0.631578947 0.375 0.605263158 24 1 0 37 3R:8719906-8719947 7 19.5 4028 FBgn0037614 544.57 26.27333333 40.6 0.035808069 0.742197412 0.480295567 2 2 2 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 8720123 8720129 + 3R_8720123_8720129_+ 0.658939961 0.658989682 0.658964821 3.51E-05 CG8116 FBtr0300544|FBtr0081905|FBtr0300543 8718041|8718041|8718041 8720339|8720339|8721320 3R + 8720103 8720168 5'utr CG8116 FlyBase G41114.1 AATGAATTTGAAAAGCAGTAGGCAGCTGAATTGCTCATGGCCGTGGAGAAGAGAAACCAAACAGAA 30 8720140 0.945167452 5 29 122 0.972972973 1.556302501 0.324324324 0.166666667 0.324324324 30 1 0 36 3R:8720103-8720168 7 CG8116 FBtr0081905|FBtr0300543|FBtr0300544 8718041|8718041|8718041 8720339|8721320|8720339 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 8720073 8720162 5'utr CG8116 FlyBase G31020.1 AAAAGGATAATATGCGGTGTAAGGAAATTTAATGAATTTGAAAAGCAGTAGGCAGCTGAATTGCTCATGGCCGTGGAGAAGAGAAACCAA 26 8720121 0.947154766 6 26 111 1 1.62324929 0.19047619 0.5 0.69047619 26 0 0 42 3R:8720073-8720162 7 17.5 4029 FBgn0037614 544.57 26.27333333 40.6 0.032135446 0.6660746 0.431034483 -17 2 -7.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 8720513 8720520 + 3R_8720513_8720520_+ 0.631136647 0.63113665 0.631136649 0 CG8116 FBtr0300543 8718041 8721320 3R + 8720460 8720532 3'utr CG8116 FlyBase G41115.1 TAGCTCGAATCTTAAAAAGAATTGTAAAAAAATCAGTGGAATGTCTCACAAAATCTAGTCAGCATCAAAATCA 37 8720513 0.980800892 8 31 224 0.857142857 1.255272505 0 0.108108108 0.214285714 37 5 1 36 3R:8720460-8720532 8 CG8116 FBtr0300543 8718041 8721320 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 8720489 8720531 3'utr CG8116 FlyBase G31022.1 AAATCAGTGGAATGTCTCACAAAATCTAGTCAGCATCAAAATC 22 8720513 0.705455413 5 18 122 0.806451613 0.795880017 0 0.363636364 0.548387097 22 3 3 25 3R:8720489-8720531 8 27.5 4030 FBgn0037614 544.57 26.27333333 40.6 0.050498558 1.046688658 0.677339901 0 0 0 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3R 8720946 8720952 + 3R_8720946_8720952_+ 0.442292309 0.5727061 0.507499204 0.092216482 CG8116 FBtr0300543 8718041 8721320 3R + 8720890 8720965 3'utr CG8116 FlyBase G41117.1 AATCACGCTCAATTATCCCCGCCTGATAGGATCCGAGGATTGCAGCTCCTCCAATGCTAGTCACTAATGTTCACAA 56 8720944 0.78675122 12 53 321 0.955882353 1.812913357 0.088235294 0.178571429 0.323529412 56 3 0 65 3R:8720890-8720965 7 CG8116 FBtr0300543 8718041 8721320 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 8720896 8720963 3'utr CG8116 FlyBase G31023.1 GCTCAATTATCCCCGCCTGATAGGATCCGAGGATTGCAGCTCCTCCAATGCTAGTCACTAATGTTCAC 41 8720944 0.770427732 10 37 240 0.865671642 1.462397998 0.119402985 0.414634146 0.641791045 41 8 1 58 3R:8720896-8720963 7 37.5 4031 FBgn0037614 544.57 26.27333333 40.6 0.068861671 1.427302715 0.92364532 2 2 2 0.1 dme-miR-184-5p 8mer-A1 TGATAAGA 3R 8721003 8721010 + 3R_8721003_8721010_+ 0.398982011 0.479532615 0.439257313 0.056957875 CG8116 FBtr0300543 8718041 8721320 3R + 8720975 8721023 3'utr CG8116 FlyBase G41118.1 AAGCTAGACCGAAGATTGTGTAATAATTTGATAAGACCTTTGTGTGGTT 8 8720990 0.968017977 3 8 51 1 1 0 0.25 0.4 8 0 0 10 3R:8720975-8721023 8 CG8116 FBtr0300543 8718041 8721320 TGATAAGA 8mer-A1 dme-miR-184-5p 3R + 8720975 8721029 3'utr CG8116 FlyBase G31024.1 AAGCTAGACCGAAGATTGTGTAATAATTTGATAAGACCTTTGTGTGGTTTCATAG 10 8720990 0.815576875 4 9 56 1 1.176091259 0.4 0.4 0.6 10 0 0 15 3R:8720975-8721029 8 3 4032 FBgn0037614 544.57 26.27333333 40.6 0.005508934 0.114184217 0.073891626 13 13 13 0.1 dme-miR-970-3p 7mer-m8 TCTTATG 3R 8735666 8735672 + 3R_8735666_8735672_+ 0.613815179 0.595541732 0.604678455 0.012921316 CG8202 FBtr0081914 8735615 8735837 3R + 8735628 8735687 3'utr CG8202 FlyBase G41138.1 GTAAATCCTATGGTTATTTATTTGCTGAGATTATATATTCTTATGTGCATGAATCTTTTA 24 8735664 0.991982066 6 23 274 0.965517241 1.447158031 0.275862069 0.166666667 0.310344828 24 1 0 28 3R:8735628-8735687 7 CG8202 FBtr0081914 8735615 8735837 TCTTATG 7mer-m8 dme-miR-970-3p 3R + 8735628 8735686 3'utr CG8202 FlyBase G31039.1 GTAAATCCTATGGTTATTTATTTGCTGAGATTATATATTCTTATGTGCATGAATCTTTT 31 8735663 0.993303019 7 30 361 0.98 1.389166084 0.32 0.387096774 0.62 31 0 1 49 3R:8735628-8735686 7 24 4033 FBgn0037622 349.97 13.58666667 20.66666667 0.068577307 1.766437684 1.161290323 2 3 2.5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 8753966 8753971 + 3R_8753966_8753971_+ 0.597044313 0.999754463 0.798399388 0.284759113 CG8223 FBtr0081915|FBtr0308889 8753798|8753798 8754104|8754104 3R + 8753895 8754049 3'utr CG8223 FlyBase G41153.1 ACGCATTAAACACCATTCAACTGTCCTATACCTCGAACCTACATATTTATGCTACTTGTTTGCTGTTTTCTACCAAAATTCTCTGTAAGTCTGTAAGTTTACAATCACAATTAGTGCTAAGTGCGTACATAAAATAATGTTTTGTATTAAAAGAA 56 8753954 0.988430915 21 55 511 0.985294118 1.525044807 0.147058824 0.214285714 0.352941176 56 0 1 67 3R:8753895-8754049 6 CG8223 FBtr0081915|FBtr0308889 8753798|8753798 8754104|8754104 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 8753896 8754017 3'utr CG8223 FlyBase G31048.1 CGCATTAAACACCATTCAACTGTCCTATACCTCGAACCTACATATTTATGCTACTTGTTTGCTGTTTTCTACCAAAATTCTCTGTAAGTCTGTAAGTTTACAATCACAATTAGTGCTAAGTG 39 8753963 0.983764645 14 38 323 0.98245614 1.748188027 0.140350877 0.307692308 0.526315789 39 1 0 56 3R:8753896-8754017 6 25 4034 FBgn0037624 1739.743333 106.23 163.4833333 0.014369936 0.235338417 0.152920787 12 3 7.5 0.1 dme-miR-932-5p 8mer-A1 GGAATTGA 3R 8774371 8774378 - 3R_8774371_8774378_- 0.592800836 0.5068638 0.549832318 0.060766635 Pif1B FBtr0332503|FBtr0091716|FBtr0091717|FBtr0332504 8774284|8774284|8774284|8774284 8774612|8774612|8774612|8774612 3R - 8774356 8774515 3'utr Pif1B FlyBase G49033.1 TATAGCGTATTGATATGTAGTGTTTGTTAAGAGTTCTTTATCTGGAGGATACCAATTGAAATCGTCTGTACGTAGTGCTTTGCATAGTGCCTTAAATCGTAATAGTATATCGTAAGCAAATATCAATGCATTGTAATGGAATTGAAAGCAGGTGGCTTCA 162 8774379 0.984877627 22 155 1255 0.943877551 2.267171728 0.076530612 0.179012346 0.321428571 162 11 0 185 3R:8774356-8774515 8 Pif1B FBtr0332504|FBtr0091717|FBtr0091716|FBtr0332503 8774284|8774284|8774284|8774284 8774612|8774612|8774612|8774612 GGAATTGA 8mer-A1 dme-miR-932-5p 3R - 8774356 8774418 3'utr Pif1B FlyBase G37011.1 CGTAATAGTATATCGTAAGCAAATATCAATGCATTGTAATGGAATTGAAAGCAGGTGGCTTCA 100 8774379 0.76898868 7 90 740 0.927631579 1.547159121 0.059210526 0.35 0.572368421 100 8 3 141 3R:8774356-8774418 8 68.5 4035 FBgn0046874 160.93 2.47 3.813333333 0.425650904 27.73279352 17.96328671 1 1 1 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 3R 8806074 8806080 + 3R_8806074_8806080_+ 0.62020426 0.620204264 0.620204262 0 Tcp-1eta FBtr0081918 8806018 8806234 3R + 8806037 8806111 3'utr Tcp-1eta FlyBase G41163.1 TCCAGAGAACACTACACCCTAATCATCAAAACTCACTTGCATTTCTCTCCTAATTTAACACGTACACGTATTACT 65 8806073 0.945176488 10 59 501 0.952941176 1.908485019 0.035294118 0.261538462 0.435294118 65 4 0 81 3R:8806037-8806111 7 Tcp-1eta FBtr0081918 8806018 8806234 TGCATTT 7mer-m8 dme-miR-277-3p 3R + 8806039 8806143 3'utr Tcp-1eta FlyBase G31058.1 CAGAGAACACTACACCCTAATCATCAAAACTCACTTGCATTTCTCTCCTAATTTAACACGTACACGTATTACTCGGTCATACCTTCGCATTTCGCACGCTTCGAA 34 8806073 0.986595955 13 32 271 0.954545455 1.62324929 0.068181818 0.235294118 0.409090909 34 2 0 42 3R:8806039-8806143 7 36 4036 FBgn0037632 3686.506667 229.3533333 352.0766667 0.009765342 0.156963056 0.102250457 1 1 1 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 8807216 8807223 + 3R_8807216_8807223_+ 0.600432941 0.529625869 0.565029405 0.05006811 hng2 FBtr0081919 8807182 8807581 3R + 8807187 8807258 3'utr hng2 FlyBase G41170.1 TTCACTACAGAAGTCAAATCATTTACAAATGCATTTACAAGAAGGGCAAAATTCGTTTAACAGCAAGTTAAC 16 8807216 0.96443678 5 15 79 1 1.278753601 0.315789474 0.1875 0.315789474 16 0 0 19 3R:8807187-8807258 8 hng2 FBtr0081919 8807182 8807581 TGCATTTA 8mer-A1 dme-miR-277-3p 3R + 8807195 8807249 3'utr hng2 FlyBase G31063.1 AGAAGTCAAATCATTTACAAATGCATTTACAAGAAGGGCAAAATTCGTTTAACAG 12 8807220 0.952218411 6 11 53 0.866666667 1.113943352 0.466666667 0.25 0.4 12 2 0 13 3R:8807195-8807249 8 8.5 4037 FBgn0037634 138.6666667 14.15666667 21.7 0.061298077 0.600423829 0.391705069 0 -4 -2 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 3R 8807462 8807467 + 3R_8807462_8807467_+ 1 0.998520493 0.999260247 0.001046164 hng2 FBtr0081919 8807182 8807581 3R + 8807433 8807497 3'utr hng2 FlyBase G41171.1 GCGTCAAATAGTTTTCTCATAGTAACTTCTGTGTTTTGCGCAATGTATATATTATACGCTTACTT 6 8807468 0.987686006 6 6 55 1 0.954242509 0.444444444 0.333333333 0.555555556 6 0 0 9 3R:8807433-8807497 6 hng2 FBtr0081919 8807182 8807581 TGTGTT 6mer3-8 dme-miR-317-3p 3R + 8807444 8807473 3'utr hng2 FlyBase G31064.1 TTTTCTCATAGTAACTTCTGTGTTTTGCGC 9 8807468 0.799595948 4 8 86 0.928571429 0.812913357 0.785714286 0.222222222 0.5 9 0 1 13 3R:8807444-8807473 6 6 4038 FBgn0037634 138.6666667 14.15666667 21.7 0.043269231 0.423828585 0.276497696 -6 -6 -6 0.1 dme-miR-276a-3p 7mer-A1 GTTCCTA 3R 8814045 8814051 - 3R_8814045_8814051_- 0.823332166 0.823348637 0.823340401 1.16E-05 CG9821 FBtr0334659 8813488 8817862 3R - 8814032 8814095 3'utr CG9821 FlyBase G49074.1 GAACCATTTCCAACTCCGTTTCGATGTGAAAAACTATCCTGATTGTTCCTATGTTAGTTCTGAG 9 8814053 0.992959407 3 7 89 0.916666667 1.041392685 0.416666667 0.333333333 0.5 9 1 0 11 3R:8814032-8814095 7 CG9821 FBtr0334659 8813488 8817862 GTTCCTA 7mer-A1 dme-miR-276a-3p 3R - 8813991 8814068 3'utr CG9821 FlyBase G37039.1 GAAAAACTATCCTGATTGTTCCTATGTTAGTTCTGAGTAGATGCAACCGCAATCGGATCGGCGAATCCATTAACAACT 10 8814053 0.993970706 4 8 95 0.785714286 1.041392685 0.214285714 0.4 0.571428571 10 3 0 11 3R:8813991-8814068 7 7.5 4039 FBgn0037636 4388.82 121.91 186.95 0.001708888 0.061520794 0.040117679 2 2 2 0.1 dme-miR-33-5p 6mer2-7 AATGCA 3R 8814154 8814159 - 3R_8814154_8814159_- 0.999999953 0.99956415 0.999782051 0.000308157 CG9821 FBtr0334659 8813488 8817862 3R - 8814107 8814176 3'utr CG9821 FlyBase G49075.1 CCAGATATTGCGACATAAATGCATGCAAAGTAAAATAAAACGATAAGCAACTTTACAGAGCCGAAGGGCA 25 8814156 0.962702372 8 25 125 1 1.462397998 0 0.16 0.275862069 25 0 0 29 3R:8814107-8814176 6 CG9821 FBtr0334659 8813488 8817862 AATGCA 6mer2-7 dme-miR-33-5p 3R - 8814145 8814182 3'utr CG9821 FlyBase G37040.1 AAACACCCAGATATTGCGACATAAATGCATGCAAAGTA 14 8814156 0.850563049 5 11 72 0.84 1.322219295 0.08 0.5 0.72 14 4 0 21 3R:8814145-8814182 6 18.5 4040 FBgn0037636 4388.82 121.91 186.95 0.004215256 0.151751292 0.09895694 -3 -3 -3 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 8814959 8814964 - 3R_8814959_8814964_- 0.996596054 0.999998753 0.998297404 0.002406072 CG9821 FBtr0081931|FBtr0334660|FBtr0334659 8814683|8814683|8813488 8817862|8817862|8817862 3R - 8814854 8815027 3'utr CG9821 FlyBase G49079.1 CGTCGTTCTAAAAACAATGAAAAGAAAGCAACCAAGCACTATGTATTTTTTTAATTTCTCCATTGATCTAATTTACAATTTAATTTGCAATTTTTTGTGATACTTTGCTATATTTTTAAACCTGGTATGTATACAAATTAAAAACAAATACAACTGAAGAGAAAACGATTAATT 320 8814965 0.990761197 33 313 3243 0.984848485 2.113943352 0.075757576 0.1875 0.343434343 320 4 2 390 3R:8814854-8815027 6 CG9821 FBtr0334659|FBtr0081931|FBtr0334660 8813488|8814683|8814683 8817862|8817862|8817862 TGATCT 6mer3-8 dme-bantam-3p 3R - 8814854 8814986 3'utr CG9821 FlyBase G37044.2 TGTATTTTTTTAATTTCTCCATTGATCTAATTTACAATTTAATTTGCAATTTTTTGTGATACTTTGCTATATTTTTAAACCTGGTATGTATACAAATTAAAAACAAATACAACTGAAGAGAAAACGATTAATT 238 8814965 0.991323228 28 232 2525 0.976331361 2.041392685 0.050295858 0.327731092 0.526627219 238 6 2 330 3R:8814854-8814986 6 126.5 4041 FBgn0037636 4388.82 121.91 186.95 0.028823237 1.037650726 0.676651511 1 1 1 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 3R 8815492 8815498 - 3R_8815492_8815498_- 0.620203952 0.62020388 0.620203916 7.07E-08 CG9821 FBtr0081931|FBtr0334660|FBtr0334659 8814683|8814683|8813488 8817862|8817862|8817862 3R - 8815244 8815536 3'utr CG9821 FlyBase G49081.1 ACCCCACAGAAAGACCCAAAACTTGTCGCGCAGAATTTTGCATTTTTTTTAAGTGTAAGCAAAACGTTTGTTACTTACTGGACGTCAGTTTAAGCGGAGAACAGCTTAGATTTCATTGAAGCAGGATAGAGATACAGATGCAAAACCTATTTGTAAAATTCAAAAGAAGAGAAAACCACTTTACTTAAAACAGACCAAAACAGCCCAGATTCGCCCGCTCTGCCTTGGACTGTGGGCACAAACGTTCCGGCCCGCTGACTTTTTCAACACCAATCAGTACAAAATAATTTCCA 284 8815499 0.984709519 42 268 2152 0.93982808 1.913813852 0.283667622 0.169014085 0.323782235 284 18 3 328 3R:8815244-8815536 7 CG9821 FBtr0334659|FBtr0081931|FBtr0334660 8813488|8814683|8814683 8817862|8817862|8817862 TGCATTT 7mer-m8 dme-miR-277-3p 3R - 8815375 8815525 3'utr CG9821 FlyBase G37046.1 AGACCCAAAACTTGTCGCGCAGAATTTTGCATTTTTTTTAAGTGTAAGCAAAACGTTTGTTACTTACTGGACGTCAGTTTAAGCGGAGAACAGCTTAGATTTCATTGAAGCAGGATAGAGATACAGATGCAAAACCTATTTGTAAAATTCA 115 8815499 0.983829572 26 107 1106 0.915662651 2.181843588 0.391566265 0.339130435 0.542168675 115 14 0 152 3R:8815375-8815525 7 98.5 4042 FBgn0037636 4388.82 121.91 186.95 0.02244339 0.807973095 0.526878845 1 1 1 0.1 dme-miR-12-5p 6mer3-8 AATACT 3R 8816157 8816162 - 3R_8816157_8816162_- 0.999940989 0.999954273 0.999947631 9.40E-06 CG9821 FBtr0081931|FBtr0334660|FBtr0334659 8814683|8814683|8813488 8817862|8817862|8817862 3R - 8816098 8816326 3'utr CG9821 FlyBase G49083.1 TATGTTTGATCTTGCGCCGAGCGGAAACAACAATTGTGAAAACAACTAAAAACTATATAAGTTGCAATCCCCAAAGCGAAGGCTTTACGAGAGAGGAAAAGATATAGTAATCGCGAGATGAGAATGAAATGAAACTACTTTATGTAAACTATTCGTTGATGCTCAATACTGAAACACTTGAACCCAGTACCTTATTTTCATTATTAGCATTACTTATTAATTGTTAATA 970 8816170 0.933809347 49 921 6839 0.948497854 2.140272291 0.098712446 0.16185567 0.302145923 970 53 7 1105 3R:8816098-8816326 6 CG9821 FBtr0334659|FBtr0081931|FBtr0334660 8813488|8814683|8814683 8817862|8817862|8817862 AATACT 6mer3-8 dme-miR-12-5p 3R - 8815675 8816324 3'utr CG9821 FlyBase G37047.2 TGTTTGATCTTGCGCCGAGCGGAAACAACAATTGTGAAAACAACTAAAAACTATATAAGTTGCAATCCCCAAAGCGAAGGCTTTACGAGAGAGGAAAAGATATAGTAATCGCGAGATGAGAATGAAATGAAACTACTTTATGTAAACTATTCGTTGATGCTCAATACTGAAACACTTGAACCCAGTACCTTATTTTCATTATTAGCATTACTTATTAATTGTTAATATTAATATGTATGTAAATTATTTAAGCCATCCCAAGCCTCCCACACTTCCAGATATCCTCAGCCAATCCAAAGTTATTTGTATTTTGCGTAGAAAGAGGCAGCGTGAGTTTTGTTATGTGTTTTTGCCAAGTGAATTGGCACCGAAGTGATAAGCCAAAAACAAAAGGAACCCCAAAATGTAAATGATAGTGGAAAATCCCAGAAATAAGATCGCACTTGAGTTTTGTTTACGCATATTGTTTAACTTCCCGAACCATCTAAATTATGAAACACGAGAATGAGAGATGAAAAGATATGAAACTATAACAAAACACTCGATGATAGTTTTAAAAATGTTGAAAAGCCAAAAAAGTCAAGTACTGTTTAGGTTTACTGAGCAAGTTGTCATATATTGGTAGCTTTAAAGCTTGTATCTTCAAGTTA 1043 8816170 0.932668009 110 962 7064 0.926234766 1.904294688 0.12508018 0.37008629 0.57857601 1043 98 17 1444 3R:8815675-8816324 6 512 4043 FBgn0037636 4388.82 121.91 186.95 0.116660059 4.199819539 2.738700187 8 8 8 0.1 dme-bantam-3p 8mer-A1 TGATCTCA 3R 8817547 8817554 - 3R_8817547_8817554_- 0.627042652 0.626812137 0.626927394 0.000163059 CG9821 FBtr0081931|FBtr0334660|FBtr0334659 8814683|8814683|8813488 8817862|8817862|8817862 3R - 8817404 8817579 3'utr CG9821 FlyBase G49088.1 AAAAAAAAAACAAGAGTAATGTTTGTGATCTCAAGTGTGTATCATAAAACAATTAAACCAATTTGAGAAGCTATTAGGTGAGAAGAGAAAAACTGTTTCAAGAAAAGAAAACTGAAAGCAAACAAAATACAAGTAAAAAACACACAAACTACTGTCCTCACACAACCGACCGACAA 1553 8817555 0.986457162 31 1472 12650 0.950578339 2.143255074 0.087276551 0.186735351 0.335962145 1553 82 12 1808 3R:8817404-8817579 8 CG9821 FBtr0334659|FBtr0081931|FBtr0334660 8813488|8814683|8814683 8817862|8817862|8817862 TGATCTCA 8mer-A1 dme-bantam-3p 3R - 8817411 8817633 3'utr CG9821 FlyBase G37051.1 AAAAAAAGCGAAAACATTTCAACTGGAAATTTGAACTTTTTTAAACAAAAACAAAAAAAAAAAACAAGAGTAATGTTTGTGATCTCAAGTGTGTATCATAAAACAATTAAACCAATTTGAGAAGCTATTAGGTGAGAAGAGAAAAACTGTTTCAAGAAAAGAAAACTGAAAGCAAACAAAATACAAGTAAAAAACACACAAACTACTGTCCTCACACAACCGA 1326 8817555 0.977850059 33 1250 10639 0.949243533 1.92719177 0.105417277 0.386877828 0.603221083 1326 82 22 1945 3R:8817411-8817633 8 1295 4044 FBgn0037636 4388.82 121.91 186.95 0.295067923 10.62259044 6.926985825 1 1 1 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 8822988 8822993 - 3R_8822988_8822993_- 0.999728727 0.999999887 0.999864307 0.000191767 CG9836 FBtr0081930 8822847 8823423 3R - 8822950 8823063 3'utr CG9836 FlyBase G49097.1 CGCGTGACTGCTGATAAGTGCATAGAAGTTTAGGAATCGTCTGTCATTGATACTAAAGGATAGCTGGAACTGATCTTGTATGAATGCATATGCACGTGTGTGTTTTGTAGGGGA 62 8822991 0.979749146 16 58 406 0.930555556 1.826074803 0.097222222 0.129032258 0.25 62 5 0 67 3R:8822950-8823063 6 CG9836 FBtr0081930 8822847 8823423 TGATCT 6mer3-8 dme-bantam-3p 3R - 8822968 8823048 3'utr CG9836 FlyBase G37067.1 AAGTGCATAGAAGTTTAGGAATCGTCTGTCATTGATACTAAAGGATAGCTGGAACTGATCTTGTATGAATGCATATGCACG 46 8822992 0.97224604 14 45 277 0.985915493 1.84509804 0.126760563 0.391304348 0.605633803 46 1 0 70 3R:8822968-8823048 6 38.5 4045 FBgn0037637 411.3666667 53.83333333 81.98666667 0.093590471 0.715170279 0.469588551 -2 -1 -1.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 8823403 8823408 - 3R_8823403_8823408_- 1 1 1 0 CG9836 FBtr0081930|FBtr0081930|FBtr0081930 8822847|8822847|8822847 8823423|8823423|8823423 3R - 8823365 8823437 stop_codon CG9836 FlyBase G49099.1 AGGTGGCCAACTGAGAGGCGGAACGGAATCTGTGAATGTAGTGGAGCGTTTCTCTGAACAACTACTAAAAAAA 315 8823409 0.955159775 9 307 1417 0.978378378 2.257678575 0.467567568 0.142857143 0.27027027 315 7 1 362 3R:8823365-8823437 6 CG9836 FBtr0081930|FBtr0081930|FBtr0081930 8822847|8822847|8822847 8823423|8823423|8823423 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 8823372 8823446 stop_codon CG9836 FlyBase G37069.1 AGCAGAAGAAGGTGGCCAACTGAGAGGCGGAACGGAATCTGTGAATGTAGTGGAGCGTTTCTCTGAACAACTACT 212 8823409 0.902667077 8 208 953 0.987878788 2.5132176 0.442424242 0.391509434 0.609090909 212 4 0 326 3R:8823372-8823446 6 253.5 4046 FBgn0037637 411.3666667 53.83333333 81.98666667 0.616238554 4.708978328 3.091966173 1 1 1 0.1 dme-miR-33-5p 7mer-A1 AATGCAA 3R 8827831 8827837 - 3R_8827831_8827837_- 0.768477523 0.775186566 0.771832044 0.00474405 pyd FBtr0305301|FBtr0310205|FBtr0305297|FBtr0305304|FBtr0305298|FBtr0305299|FBtr0305296|FBtr0305295 8827496|8827066|8827496|8827496|8827496|8827496|8827496|8827066 8828314|8828094|8828094|8828314|8828314|8828314|8828314|8828314 3R - 8827783 8827858 3'utr pyd FlyBase G49103.1 GAGCTAGAAATTAATCAATCGAATGCAATGGATACTTGTATAAAGCGACTAGAATTTAATTTCATACACAAATTAT 26 8827835 0.973883204 7 26 163 1 1.531478917 0.117647059 0.230769231 0.411764706 26 0 0 34 3R:8827783-8827858 7 pyd FBtr0305296|FBtr0305295|FBtr0305298|FBtr0305299|FBtr0305297|FBtr0305304|FBtr0305301|FBtr0310205 8827496|8827066|8827496|8827496|8827496|8827496|8827496|8827066 8828314|8828314|8828314|8828314|8828094|8828314|8828314|8828094 AATGCAA 7mer-A1 dme-miR-33-5p 3R - 8827788 8827925 3'utr pyd FlyBase G37074.1 AATTCGATATTGTCTGTTAATTGTGCCTTTAAGTGATCGTTTGGCTCTGCCTCTGAACTATTATATCGAGCTAGAAATTAATCAATCGAATGCAATGGATACTTGTATAAAGCGACTAGAATTTAATTTCATACACAA 48 8827835 0.982303009 23 45 371 0.961038961 1.392110465 0.12987013 0.375 0.61038961 48 1 2 74 3R:8827788-8827925 7 22.5 4047 FBgn0262614 694.76 11.98333333 18.49333333 0.032385284 1.877607789 1.21665465 -2 -2 -2 0.1 dme-miR-1007-3p 6mer3-8 TGAGCT 3R 8827972 8827977 - 3R_8827972_8827977_- 0.999999992 0.999999693 0.999999842 2.12E-07 pyd FBtr0305301|FBtr0310205|FBtr0305297|FBtr0305304|FBtr0305298|FBtr0305299|FBtr0305296|FBtr0305295 8827496|8827066|8827496|8827496|8827496|8827496|8827496|8827066 8828314|8828094|8828094|8828314|8828314|8828314|8828314|8828314 3R - 8827904 8828033 3'utr pyd FlyBase G49104.2 TAGATCCGTAGTATCATATGTGTAGTCTTAGGGCCGCAATTCCAGGGCAGACGAAATGAGCTGAGCAAAGAGGTAGTATAGGCATTGCTTATATAATATAATAAATTTAATTCGATATTGTCTGTTAATT 55 8827977 0.987064342 13 51 311 0.984848485 1.812913357 0.136363636 0.127272727 0.272727273 55 1 0 65 3R:8827904-8828033 6 pyd FBtr0305296|FBtr0305295|FBtr0305298|FBtr0305299|FBtr0305297|FBtr0305304|FBtr0305301|FBtr0310205 8827496|8827066|8827496|8827496|8827496|8827496|8827496|8827066 8828314|8828314|8828314|8828314|8828094|8828314|8828314|8828094 TGAGCT 6mer3-8 dme-miR-1007-3p 3R - 8827942 8828182 stop_codon pyd FlyBase G37075.1 GAAGAATCTGCACACCGAGTGGGACAACATCGACCTGCCCAGCAATGCCGCCGCTCACACGGTCTCCGTCAAGGTGGATCACTTCTAATCATTAAGATTCATAGCACTACCATTCACCAGCCAACTTGAACGATATACGAAATTGTAAATAGATCCGTAGTATCATATGTGTAGTCTTAGGGCCGCAATTCCAGGGCAGACGAAATGAGCTGAGCAAAGAGGTAGTATAGGCATTGCTTAT 44 8827977 0.963941579 22 40 204 0.917808219 1.525044807 0.164383562 0.386363636 0.630136986 44 5 1 67 3R:8827942-8828182 6 11 4048 FBgn0262614 694.76 11.98333333 18.49333333 0.015832806 0.917941586 0.59480894 0 0 0 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3R 8942452 8942458 + 3R_8942452_8942458_+ 0.52122266 0.521223855 0.521223257 8.49E-07 skap FBtr0334328|FBtr0334327 8942073|8942073 8942557|8942557 3R + 8942412 8942471 3'utr skap FlyBase G41209.1 ACGTGAATAATAGAAAATGGAAATGAAAATACGTTTTAATTGTGATTTTTGCAAAAGTTC 29 8942458 0.991705167 6 27 299 0.948717949 1.267171728 0.358974359 0.206896552 0.41025641 29 1 1 37 3R:8942412-8942471 7 skap FBtr0334328|FBtr0334327 8942073|8942073 8942557|8942557 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 8942403 8942539 3'utr skap FlyBase G31087.1 ATTAATTGCACGTGAATAATAGAAAATGGAAATGAAAATACGTTTTAATTGTGATTTTTGCAAAAGTTCATTTAAATTTTATTTATTGAAATGTGACCCTGCTTTTAAAGCAGATCCATCATCTTGTGTATTATCCT 41 8942451 0.991400554 16 39 410 0.943396226 1.698970004 0.264150943 0.219512195 0.396226415 41 3 0 50 3R:8942403-8942539 7 26.5 4049 FBgn0037643 1428.996667 91.75333333 140.5033333 0.01854448 0.288817845 0.188607625 -6 1 -2.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 8982673 8982680 + 3R_8982673_8982680_+ 0.643031158 0.634572062 0.63880161 0.005981487 CAHbeta FBtr0340014|FBtr0340014|FBtr0340014 8981922|8981922|8981922 8982793|8982793|8982793 3R + 8982587 8982709 3'utr CAHbeta FlyBase G41212.1 GATGAAGACACCGTGGATCGATTGTCCGAGGAGGTCAGAAGATTCTATTCGTAGGCGAAACATGCCAAGAGGACCAAATGGATTATCTGTGATATGTGGGCCTTATACCGCGATCGGCATTTA 144 8982672 0.964113334 14 134 1299 0.93452381 1.894869657 0.107142857 0.118055556 0.244047619 144 10 1 157 3R:8982587-8982709 8 CAHbeta FBtr0340014|FBtr0340014|FBtr0340014 8981922|8981922|8981922 8982793|8982793|8982793 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 8982639 8982699 3'utr CAHbeta FlyBase G31089.1 AGGCGAAACATGCCAAGAGGACCAAATGGATTATCTGTGATATGTGGGCCTTATACCGCGA 97 8982672 0.869174298 11 92 907 0.955128205 1.571126277 0.102564103 0.381443299 0.615384615 97 4 3 149 3R:8982639-8982699 8 113 4050 FBgn0037646 43.33333333 4.79 7.23 2.607692308 23.5908142 15.62932227 1 1 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3R 8982994 8982999 - 3R_8982994_8982999_- 0.678948741 0.537685117 0.608316929 0.099888449 RagA-B FBtr0082013 8982730 8983112 3R - 8982977 8983061 3'utr RagA-B FlyBase G49168.1 GTTCAAAAAGACATGAATACCGTCTGTTGTTTTGCAAACATCGAAGCGCCCAAGGTGCCGCCCCAAAGTCTTACAGCTTCCCGTA 30 8983006 0.947835374 6 28 93 0.96875 1.491361694 0.125 0.066666667 0.125 30 1 0 31 3R:8982977-8983061 6 RagA-B FBtr0082013 8982730 8983112 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 8982976 8983055 3'utr RagA-B FlyBase G37123.1 AAAGACATGAATACCGTCTGTTGTTTTGCAAACATCGAAGCGCCCAAGGTGCCGCCCCAAAGTCTTACAGCTTCCCGTAA 14 8983006 0.99990894 4 13 64 0.95 0.977723605 0.15 0.285714286 0.5 14 0 1 19 3R:8982976-8983055 6 14 4051 FBgn0037647 218.6666667 19.01 29.22 0.06402439 0.736454498 0.479123888 7 7 7 0.1 dme-miR-283-5p 7mer-m1 GATATTT 3R 8994788 8994794 + 3R_8994788_8994794_+ 0.765580947 0.764674149 0.765127548 0.000641204 CG11975 FBtr0081960|FBtr0336753 8994632|8994632 8994839|8995212 3R + 8994759 8994801 3'utr CG11975 FlyBase G41231.1 ATGTAGTTATACCTTGAGACATGATTGTGGATATTTTATATTT 34 8994783 0.736873264 5 33 260 0.943396226 1.096910013 0.113207547 0.411764706 0.622641509 34 0 3 50 3R:8994759-8994801 7 CG11975 FBtr0336753|FBtr0081960 8994632|8994632 8995212|8994839 GATATTT 7mer-m1 dme-miR-283-5p 3R + 8994743 8994804 3'utr CG11975 FlyBase G31103.1 AGTCGAGTTCACATAAATGTAGTTATACCTTGAGACATGATTGTGGATATTTTATATTTTAT 27 8994783 0.984699561 5 27 218 1 1.556302501 0.055555556 0.259259259 0.444444444 27 0 0 36 3R:8994743-8994804 7 22.5 4052 FBgn0037648 137.6666667 11.18666667 17.04333333 0.163438257 2.011323004 1.320164287 5 5 5 0.1 dme-miR-283-5p 7mer-m8 TGATATT 3R 9007898 9007904 + 3R_9007898_9007904_+ 0.620189973 0.620189517 0.620189745 3.54E-07 CG11982 FBtr0081965 9007855 9008030 3R + 9007874 9007933 3'utr CG11982 FlyBase G41249.1 AATCGAAGTGGAGCGATGATCGATTGATATTCAAAATTAAGCCAAATATTGGCCGCATAT 24 9007897 0.981757562 5 23 166 0.965517241 1.447158031 0.034482759 0.166666667 0.310344828 24 1 0 28 3R:9007874-9007933 7 CG11982 FBtr0081965 9007855 9008030 TGATATT 7mer-m8 dme-miR-283-5p 3R + 9007872 9007912 3'utr CG11982 FlyBase G31115.1 TAAATCGAAGTGGAGCGATGATCGATTGATATTCAAAATTA 13 9007897 0.776921424 3 13 102 1 1.361727836 0 0.461538462 0.695652174 13 0 0 23 3R:9007872-9007912 7 16.5 4053 FBgn0037653 203.22 15.85333333 24.31666667 0.081192796 1.04079058 0.67854695 1 1 1 0.1 dme-miR-305-3p 6mer3-8 ATGTGC 3R 9010334 9010339 - 3R_9010334_9010339_- 0.999891794 0.990361107 0.99512645 0.006739223 CG11984 FBtr0300743|FBtr0300747|FBtr0300748|FBtr0300745|FBtr0300746|FBtr0300744 9010280|9010280|9010280|9010280|9010280|9010280 9010672|9010672|9010672|9010672|9010672|9010672 3R - 9010289 9010352 3'utr CG11984 FlyBase G49192.1 AAAGATGAGGAAGATGTGCAGCAAGAAAAATTATTGTAATCATTGAATTAATTATAATTTAAAG 15 9010338 0.839128936 5 13 60 0.875 0.84509804 0.4375 0.066666667 0.125 15 1 1 14 3R:9010289-9010352 6 CG11984 FBtr0300745|FBtr0300748|FBtr0300747|FBtr0300743|FBtr0300744|FBtr0300746 9010280|9010280|9010280|9010280|9010280|9010280 9010672|9010672|9010672|9010672|9010672|9010672 ATGTGC 6mer3-8 dme-miR-305-3p 3R - 9010286 9010358 3'utr CG11984 FlyBase G37138.1 TTATAAAAAGATGAGGAAGATGTGCAGCAAGAAAAATTATTGTAATCATTGAATTAATTATAATTTAAAGAAA 18 9010338 0.925047782 4 18 69 1 1.431363764 0.407407407 0.388888889 0.592592593 18 0 0 27 3R:9010286-9010358 6 13 4054 FBgn0037655 1188.326667 58.71666667 90.07 0.010939753 0.221402214 0.144332186 -1 -1 -1 0.1 dme-miR-965-3p 6mer2-7 ACGCTT 3R 9017195 9017200 - 3R_9017195_9017200_- 0.997031974 0.999983293 0.998507634 0.002086884 tgo FBtr0082005 9016771 9017753 3R - 9017184 9017226 3'utr tgo FlyBase G49212.1 AGCAACTCAGCAAGTGTACCACTTCCACGCTTTTCCCGCGAAC 10 9017194 0.707454545 2 10 59 1 1.079181246 0 0.2 0.333333333 10 0 0 12 3R:9017184-9017226 6 tgo FBtr0082005 9016771 9017753 ACGCTT 6mer2-7 dme-miR-965-3p 3R - 9017186 9017239 3'utr tgo FlyBase G37153.1 ATTGATAGTTGTAAGCAACTCAGCAAGTGTACCACTTCCACGCTTTTCCCGCGA 5 9017220 0.948781538 4 5 26 1 1 0.3 0.6 0.8 5 0 0 10 3R:9017186-9017239 6 6 4055 FBgn0264075 208 8.796666667 13.4 0.028846154 0.682076544 0.447761194 -6 20 7 0.1 dme-miR-7-5p 6mer2-7 TCTTCC 3R 9017720 9017725 - 3R_9017720_9017725_- 0.977243409 0.994900959 0.986072184 0.012485809 tgo FBtr0082005|FBtr0336755 9016771|9017245 9017753|9017753 3R - 9017665 9017743 3'utr tgo FlyBase G49217.1 ATTTCTTTCGATTCCCACTCTTCCCCCGTCCCGCAACTTAATCTGTGTCTCTCTTAACCACTTCTCAAGTGCAATCCAT 12 9017723 0.981112032 7 12 89 1 1.146128036 0.142857143 0.166666667 0.285714286 12 0 0 14 3R:9017665-9017743 6 tgo FBtr0082005|FBtr0336755 9016771|9017245 9017753|9017753 TCTTCC 6mer2-7 dme-miR-7-5p 3R - 9017688 9017741 3'utr tgo FlyBase G37157.1 TTCTTTCGATTCCCACTCTTCCCCCGTCCCGCAACTTAATCTGTGTCTCTCTTA 8 9017732 0.983815836 4 7 64 0.9 0.954242509 0.2 0.25 0.4 8 1 0 9 3R:9017688-9017741 6 7.5 4056 FBgn0264075 208 8.796666667 13.4 0.036057692 0.85259568 0.559701493 -2 7 2.5 0.1 dme-miR-33-5p 6mer3-8 CAATGC 3R 9020385 9020390 - 3R_9020385_9020390_- 0.99920409 0.999491751 0.99934792 0.000203435 neur FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002 9020346|9020346|9020346|9020346 9021792|9021792|9021792|9021792 3R - 9020367 9020408 3'utr neur FlyBase G49224.1 GATATATGTAAGAAAACGCAATGCTGTAATACCATTAAATAC 26 9020387 0.964396529 2 24 108 0.935483871 1.462397998 0.129032258 0.153846154 0.290322581 26 2 0 29 3R:9020367-9020408 6 neur FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002 9020346|9020346|9020346|9020346 9021792|9021792|9021792|9021792 CAATGC 6mer3-8 dme-miR-33-5p 3R - 9020365 9020399 3'utr neur FlyBase G37161.1 AAGAAAACGCAATGCTGTAATACCATTAAATACTG 23 9020387 0.971257676 2 22 97 0.918918919 1.531478917 0.135135135 0.434782609 0.648648649 23 3 0 34 3R:9020365-9020399 6 24.5 4057 FBgn0002932 466.07 14.63 22.51666667 0.052567211 1.674641148 1.088082902 -3 -3 -3 0.1 dme-miR-14-3p 6mer3-8 AAGACT 3R 9020794 9020799 - 3R_9020794_9020799_- 0.903923459 0.869772868 0.886848163 0.024148121 neur FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002|FBtr0300414 9020346|9020346|9020346|9020346|9020721 9021792|9021792|9021792|9021792|9021792 3R - 9020742 9020812 3'utr neur FlyBase G49226.1 AAACATAGAACAAAAGACTTGTATGTTGTACCAACAGCTTGAATGAAATATGGAAAATGGAATGCCCATCT 39 9020791 0.977938856 6 32 208 0.822222222 1.091080469 0.022222222 0.128205128 0.244444444 39 6 2 37 3R:9020742-9020812 6 neur FBtr0300414|FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002 9020721|9020346|9020346|9020346|9020346 9021792|9021792|9021792|9021792|9021792 AAGACT 6mer3-8 dme-miR-14-3p 3R - 9020744 9020837 3'utr neur FlyBase G37162.1 TGGAGACTTAAATATATTTAACTATAAACATAGAACAAAAGACTTGTATGTTGTACCAACAGCTTGAATGAAATATGGAAAATGGAATGCCCAT 30 9020791 0.969805414 10 29 156 0.973684211 1.568201724 0.026315789 0.2 0.368421053 30 1 0 37 3R:9020744-9020837 6 31 4058 FBgn0002932 466.07 14.63 22.51666667 0.066513614 2.118933698 1.376757957 -8 -8 -8 0.1 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 9020972 9020979 - 3R_9020972_9020979_- 0.631109083 0.631123801 0.631116442 1.04E-05 neur FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002|FBtr0300414 9020346|9020346|9020346|9020346|9020721 9021792|9021792|9021792|9021792|9021792 3R - 9020954 9021023 3'utr neur FlyBase G49227.1 GTTTAAAGTTAATATTAGTCTAGCCCTAAGTACTTAAGTTAATTTCTAGTCAACGAATTATGCTGAAGTT 100 9020980 0.98176363 8 93 688 0.936507937 1.594760753 0.03968254 0.18 0.349206349 100 6 2 118 3R:9020954-9021023 8 neur FBtr0300414|FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002 9020721|9020346|9020346|9020346|9020346 9021792|9021792|9021792|9021792|9021792 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R - 9020953 9020989 3'utr neur FlyBase G37163.1 TAAGTTAATTTCTAGTCAACGAATTATGCTGAAGTTA 95 9020980 0.80044952 4 93 619 0.973509934 2.167317335 0.039735099 0.410526316 0.629139073 95 4 0 147 3R:9020953-9020989 8 95.5 4059 FBgn0002932 466.07 14.63 22.51666667 0.204904843 6.527682843 4.241302739 1 1 1 0.1 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 3R 9021265 9021272 - 3R_9021265_9021272_- 0.625363986 0.625363974 0.62536398 0 neur FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002|FBtr0300414 9020346|9020346|9020346|9020346|9020721 9021792|9021792|9021792|9021792|9021792 3R - 9021251 9021291 3'utr neur FlyBase G49229.1 ATTTGGCGATTAATCATTTTGGTGCTAAATGTTTTGAAAGG 37 9021273 0.723439899 5 37 361 1 1.681241237 0.270833333 0.243243243 0.416666667 37 0 0 48 3R:9021251-9021291 8 neur FBtr0300414|FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002 9020721|9020346|9020346|9020346|9020346 9021792|9021792|9021792|9021792|9021792 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 3R - 9021250 9021290 3'utr neur FlyBase G37164.1 TTTGGCGATTAATCATTTTGGTGCTAAATGTTTTGAAAGGC 31 9021273 0.725945473 2 31 290 1 1.662757832 0.347826087 0.322580645 0.543478261 31 0 0 46 3R:9021250-9021290 8 34 4060 FBgn0002932 466.07 14.63 22.51666667 0.072950415 2.323991798 1.509992598 1 1 1 0.1 dme-miR-11-3p 7mer-m1 TGTGATG 3R 9021555 9021561 - 3R_9021555_9021561_- 0.612071112 0.61207112 0.612071116 0 neur FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002|FBtr0300414 9020346|9020346|9020346|9020346|9020721 9021792|9021792|9021792|9021792|9021792 3R - 9021504 9021579 3'utr neur FlyBase G49230.1 ACGTATGTTTAATTTTTTTGTGATGTTATAAGTAAGTGCGCCCCAGAGCCAAAACTATGTATTGTTCAATCCAACA 26 9021562 0.804586544 7 22 304 0.866666667 1.113943352 0.233333333 0.115384615 0.233333333 26 3 1 26 3R:9021504-9021579 7 neur FBtr0300414|FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002 9020721|9020346|9020346|9020346|9020346 9021792|9021792|9021792|9021792|9021792 TGTGATG 7mer-m1 dme-miR-11-3p 3R - 9021503 9021611 3'utr neur FlyBase G37165.1 TTAGTGTATGAAACTATCAACTAATTTATCACACGTATGTTTAATTTTTTTGTGATGTTATAAGTAAGTGCGCCCCAGAGCCAAAACTATGTATTGTTCAATCCAACAA 24 9021563 0.993717466 12 22 268 0.925 1.267171728 0.2 0.5 0.7 24 2 1 37 3R:9021503-9021611 7 20 4061 FBgn0002932 466.07 14.63 22.51666667 0.042912009 1.367053999 0.88823094 1 2 1.5 0.1 dme-miR-317-5p 6mer3-8 GTATCC 3R 9042309 9042314 + 3R_9042309_9042314_+ 0.909599839 0.99999999 0.954799915 0.063922594 hyx FBtr0300415|FBtr0081968 9041940|9041940 9042349|9042349 3R + 9042287 9042344 3'utr hyx FlyBase G41258.2 AAACACAAACATCTGAGAGCAAGTATCCTTTGTATTTTTAGTGATAATAAACAGTTAA 16 9042318 0.859263488 8 15 134 0.952380952 1 0.095238095 0.1875 0.380952381 16 0 1 20 3R:9042287-9042344 6 hyx FBtr0300415|FBtr0081968 9041940|9041940 9042349|9042349 GTATCC 6mer3-8 dme-miR-317-5p 3R + 9042291 9042330 3'utr hyx FlyBase G31123.1 ACAAACATCTGAGAGCAAGTATCCTTTGTATTTTTAGTGA 9 9042316 0.70232995 4 9 74 1 1.230448921 0 0.555555556 0.764705882 9 0 0 17 3R:9042291-9042330 6 9.5 4062 FBgn0037657 511.6666667 27.83666667 42.89666667 0.018566775 0.341276494 0.221462429 -9 -7 -8 0.1 dme-miR-8-3p 6mer2-7 AGTATT 3R 9042611 9042616 - 3R_9042611_9042616_- 0.852464037 1 0.926232019 0.104323706 Nmdmc FBtr0081997|FBtr0336761|FBtr0081996 9042506|9042506|9042506 9042656|9042656|9042656 3R - 9042564 9042638 3'utr Nmdmc FlyBase G49239.1 CGTGCTTCGCTGGCCGAGAAATAGTATTTTTATTTAATCCCCTAAACCTATATTAGATAGTAAAGTTACTGACCA 8 9042610 0.98375913 5 8 66 1 1 0.2 0.25 0.4 8 0 0 10 3R:9042564-9042638 6 Nmdmc FBtr0081996|FBtr0336761|FBtr0081997 9042506|9042506|9042506 9042656|9042656|9042656 AGTATT 6mer2-7 dme-miR-8-3p 3R - 9042595 9042637 3'utr Nmdmc FlyBase G37173.1 GTGCTTCGCTGGCCGAGAAATAGTATTTTTATTTAATCCCCTA 6 9042616 0.900174903 3 6 59 1 1.113943352 0.692307692 0.333333333 0.692307692 6 0 0 13 3R:9042595-9042637 6 5.5 4063 FBgn0010222 307.6666667 32.58333333 49.87 0.01787649 0.168797954 0.110286746 -6 0 -3 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 9062211 9062217 + 3R_9062211_9062217_+ 0.658954007 0.658994415 0.658974211 2.86E-05 Kdm2 FBtr0300691|FBtr0336760|FBtr0336759|FBtr0336758 9062203|9062203|9062203|9062203 9063245|9063245|9063245|9063245 3R + 9062184 9062232 stop_codon Kdm2 FlyBase G41288.1 CGAAGCTGGCACCACGACTGAGCCACTGGCAGCTGGAGGAGGGCCAATA 43 9062210 0.94716337 3 42 82 0.98 1.389166084 0.32 0.162790698 0.28 43 0 1 49 3R:9062184-9062232 7 Kdm2 FBtr0300691|FBtr0336760|FBtr0336759|FBtr0336758 9062203|9062203|9062203|9062203 9063245|9063245|9063245|9063245 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 9062186 9062244 stop_codon Kdm2 FlyBase G31153.1 AAGCTGGCACCACGACTGAGCCACTGGCAGCTGGAGGAGGGCCAATACATCTTAATCAT 20 9062210 0.836495522 5 19 46 0.964285714 1.431363764 0.178571429 0.3 0.5 20 1 0 27 3R:9062186-9062244 7 27.5 4064 FBgn0037659 729.05 16.58333333 25.47333333 0.037720321 1.658291457 1.079560325 1 1 1 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3R 9062375 9062381 + 3R_9062375_9062381_+ 0.82333936 0.823348585 0.823343972 6.51E-06 Kdm2 FBtr0300691|FBtr0336760|FBtr0336759|FBtr0336758 9062203|9062203|9062203|9062203 9063245|9063245|9063245|9063245 3R + 9062235 9062392 3'utr Kdm2 FlyBase G41289.1 TCTTAATCATATGCATTAAGACACCAAACTTTCTAAGCCCCAATCCAGTACCATGTACTCCGAATCCCTCGCCGGAATGCAAGCCAAAGAGTGTCGTCGGGCCCTTTGCATTGCGTGTGGTTATATTCTTAAATGCTAAGCTAGTCAGGATAGGGCTC 34 9062371 0.975682334 12 31 197 0.918918919 1.531478917 0.135135135 0.088235294 0.162162162 34 3 0 34 3R:9062235-9062392 7 Kdm2 FBtr0300691|FBtr0336760|FBtr0336759|FBtr0336758 9062203|9062203|9062203|9062203 9063245|9063245|9063245|9063245 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 9062287 9062445 3'utr Kdm2 FlyBase G31154.1 ATGTACTCCGAATCCCTCGCCGGAATGCAAGCCAAAGAGTGTCGTCGGGCCCTTTGCATTGCGTGTGGTTATATTCTTAAATGCTAAGCTAGTCAGGATAGGGCTCAGGTCATATTCAGGTTCAGGTCTGTTTTTCCGATACCTTTTGAGAATCTCAAA 27 9062371 0.88351406 14 23 190 0.860465116 1.568201724 0.069767442 0.333333333 0.581395349 27 6 0 37 3R:9062287-9062445 7 11.5 4065 FBgn0037659 729.05 16.58333333 25.47333333 0.015773952 0.693467337 0.451452499 4 4 4 0.1 dme-miR-277-3p 6mer3-8 TGCATT 3R 9067663 9067668 - 3R_9067663_9067668_- 0.718111776 0.721782922 0.719947349 0.00259586 pum FBtr0081993|FBtr0333668|FBtr0333667 9067576|9066341|9066341 9070944|9070944|9070944 3R - 9067649 9067767 3'utr pum FlyBase G49273.1 CACAGAGCGAGACCTTTAGTTTTGTAAACCGCGAGCGATTGGCACAAGTTAAATAACTACAATTTGGACAGCATTGCATTCGAGCATTTGATTTAACAATGCATTAGATTTTTATGTTT 44 9067664 0.978270228 14 43 330 0.980392157 1.698970004 0.333333333 0.159090909 0.274509804 44 1 0 50 3R:9067649-9067767 6 pum FBtr0333667|FBtr0333668|FBtr0081993 9066341|9066341|9067576 9070944|9070944|9070944 TGCATT 6mer3-8 dme-miR-277-3p 3R - 9067649 9067773 3'utr pum FlyBase G37211.1 TACAAACACAGAGCGAGACCTTTAGTTTTGTAAACCGCGAGCGATTGGCACAAGTTAAATAACTACAATTTGGACAGCATTGCATTCGAGCATTTGATTTAACAATGCATTAGATTTTTATGTTT 46 9067664 0.981035516 14 43 315 0.953125 1.785329835 0.125 0.347826087 0.53125 46 3 0 61 3R:9067649-9067773 6 23 4066 FBgn0003165 2989.103333 65.03333333 99.94333333 0.007694615 0.353664787 0.230130407 -4 -4 -4 0.1 dme-miR-1006-3p 8mer-A1 CGAATTTA 3R 9069318 9069325 - 3R_9069318_9069325_- 0.671697223 0.671697512 0.671697368 2.12E-07 pum FBtr0081993|FBtr0333668|FBtr0333667 9067576|9066341|9066341 9070944|9070944|9070944 3R - 9069292 9069416 3'utr pum FlyBase G49277.1 CATTTTTGATATAAATTTAGATTACTTCGCGACGCCTTATTCCAAATACTAAAATACTGAAAATAATGAAAACGAGAGATGGTAAGAAAATCGAATTTAGACTTTTTTGTCGGTTTCGTCGAAAC 27 9069325 0.908371165 9 24 200 0.931034483 1.431363764 0.413793103 0.074074074 0.137931034 27 2 0 27 3R:9069292-9069416 8 pum FBtr0333667|FBtr0333668|FBtr0081993 9066341|9066341|9067576 9070944|9070944|9070944 CGAATTTA 8mer-A1 dme-miR-1006-3p 3R - 9069306 9069337 3'utr pum FlyBase G37215.1 TGGTAAGAAAATCGAATTTAGACTTTTTTGTC 7 9069326 0.970650807 3 6 53 0.857142857 0.77815125 0.285714286 0 0 7 1 0 6 3R:9069306-9069337 8 9 4067 FBgn0003165 2989.103333 65.03333333 99.94333333 0.003010936 0.138390569 0.090051029 0 1 0.5 0.1 dme-miR-12-5p 6mer3-8 AATACT 3R 9069367 9069372 - 3R_9069367_9069372_- 0.998367556 0.963181041 0.980774299 0.024880683 pum FBtr0081993|FBtr0333668|FBtr0333667 9067576|9066341|9066341 9070944|9070944|9070944 3R - 9069292 9069416 3'utr pum FlyBase G49277.1 CATTTTTGATATAAATTTAGATTACTTCGCGACGCCTTATTCCAAATACTAAAATACTGAAAATAATGAAAACGAGAGATGGTAAGAAAATCGAATTTAGACTTTTTTGTCGGTTTCGTCGAAAC 27 9069377 0.908371165 9 24 200 0.931034483 1.431363764 0.413793103 0.074074074 0.137931034 27 2 0 27 3R:9069292-9069416 6 pum FBtr0333667|FBtr0333668|FBtr0081993 9066341|9066341|9067576 9070944|9070944|9070944 AATACT 6mer3-8 dme-miR-12-5p 3R - 9069353 9069389 3'utr pum FlyBase G37216.1 CGCGACGCCTTATTCCAAATACTAAAATACTGAAAAT 9 9069378 0.963352404 2 9 48 1 1.041392685 0.363636364 0.222222222 0.363636364 9 0 0 11 3R:9069353-9069389 6 9.5 4068 FBgn0003165 2989.103333 65.03333333 99.94333333 0.003178211 0.146078934 0.095053864 5 6 5.5 0.1 dme-miR-2b-2-5p 6mer2-7 TGAAGA 3R 9070370 9070375 - 3R_9070370_9070375_- 1 0.999999984 0.999999992 0 pum FBtr0081993|FBtr0305197|FBtr0333668|FBtr0081994|FBtr0081990|FBtr0081992|FBtr0333667|FBtr0081991 9067576|9069755|9066341|9069755|9069755|9069755|9066341|9069755 9070944|9070944|9070944|9070944|9070944|9070944|9070944|9070944 3R - 9070369 9070442 3'utr pum FlyBase G49281.1 AATTATTATATAGCAAGTCTATCTGTAAATGATTAATGTTTCGACTGTAAATTAATAAGAAGACAACTGAAGAG 10 9070403 0.98930707 7 9 86 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 3R:9070369-9070442 6 pum FBtr0333667|FBtr0081991|FBtr0081990|FBtr0081992|FBtr0333668|FBtr0081994|FBtr0081993|FBtr0305197 9066341|9069755|9069755|9069755|9066341|9069755|9067576|9069755 9070944|9070944|9070944|9070944|9070944|9070944|9070944|9070944 TGAAGA 6mer2-7 dme-miR-2b-2-5p 3R - 9070358 9070416 3'utr pum FlyBase G37220.1 AAATGATTAATGTTTCGACTGTAAATTAATAAGAAGACAACTGAAGAGCCGGCGAGCTG 10 9070395 0.972702496 6 10 49 1 1.322219295 0.19047619 0.7 0.857142857 10 0 0 21 3R:9070358-9070416 6 2.5 4069 FBgn0003165 2989.103333 65.03333333 99.94333333 0.000836371 0.038441825 0.025014175 28 20 24 0.1 dme-miR-1002-5p 6mer3-8 CTACTT 3R 9238376 9238381 - 3R_9238376_9238381_- 0.945455907 0.950947093 0.9482015 0.003882865 D1 FBtr0081988|FBtr0301524|FBtr0081987 9238081|9238081|9238081 9238518|9238518|9238518 3R - 9238342 9238411 3'utr D1 FlyBase G49317.1 AAGAGAAGAAAACACAAAAATGGATAGGACCTACTTGGACTTTAGAGAACCTTCCCCTCCTAAAACAACA 45 9238376 0.968541191 8 44 246 1 1.69019608 0.224489796 0.088888889 0.163265306 45 0 0 49 3R:9238342-9238411 6 D1 FBtr0081987|FBtr0081988|FBtr0301524 9238081|9238081|9238081 9238518|9238518|9238518 CTACTT 6mer3-8 dme-miR-1002-5p 3R - 9238296 9238393 3'utr D1 FlyBase G37248.1 AATGGATAGGACCTACTTGGACTTTAGAGAACCTTCCCCTCCTAAAACAACACACTTTGTCTACATATATATTCCGATTTATTGCTGAGAAATCGGAC 24 9238376 0.825429496 9 24 145 1 1.491361694 0.193548387 0.291666667 0.451612903 24 0 0 31 3R:9238296-9238393 6 25 4070 FBgn0000412 3413.53 239.6433333 366.14 0.007323797 0.1043217 0.068279893 -5 -5 -5 0.1 dme-miR-965-3p 7mer-m8 TACGCTT 3R 9262231 9262237 + 3R_9262231_9262237_+ 0.620204757 0.620204695 0.620204726 7.07E-08 VhaM8.9 FBtr0081978 9262171 9262590 3R + 9262202 9262590 3'utr VhaM8.9 FlyBase G41311.1 GGAGCAGGAGGAGCGAGAGGAGCTTGCGTTACGCTTTGTTATTTCGTCCCCCTTTTAAGTTGAAATTTGCCAACTTCTACTTCAATCCAACAGCGGATAAATTGTGTGTTTGTGTGTGTGCGGACAGCTGTCGCAGTAGTTGGTTTTATTATCTATAAATAAGTATTAAAAAACTTTTCAGTTTTCAATGCAGTTGCGGGCGTCGCAACAATTCCATAGAAATTTGTTACATTTTCCTGTTTTGTTGTACTTTTTAGGTTTATATATATATACGAATATGCACAACATACTCGCCAAGTCAGTCAGTTCTTCAAACGATTCATCATATGTAAATTATCAAAATGTGAAGTGTTGAAAAGTAAAGTTAAATATATATAGCCTAAAAAGAC 245 9262243 0.986978018 54 234 2045 0.954063604 1.954242509 0.130742049 0.126530612 0.243816254 245 11 2 270 3R:9262202-9262590 7 VhaM8.9 FBtr0081978 9262171 9262590 TACGCTT 7mer-m8 dme-miR-965-3p 3R + 9262203 9262537 3'utr VhaM8.9 FlyBase G31173.1 GAGCAGGAGGAGCGAGAGGAGCTTGCGTTACGCTTTGTTATTTCGTCCCCCTTTTAAGTTGAAATTTGCCAACTTCTACTTCAATCCAACAGCGGATAAATTGTGTGTTTGTGTGTGTGCGGACAGCTGTCGCAGTAGTTGGTTTTATTATCTATAAATAAGTATTAAAAAACTTTTCAGTTTTCAATGCAGTTGCGGGCGTCGCAACAATTCCATAGAAATTTGTTACATTTTCCTGTTTTGTTGTACTTTTTAGGTTTATATATATATACGAATATGCACAACATACTCGCCAAGTCAGTCAGTTCTTCAAACGATTCATCATATGTAAATTA 196 9262240 0.987083951 41 182 1597 0.942028986 2.414973348 0.09057971 0.31122449 0.510869565 196 16 0 260 3R:9262203-9262537 7 119 4071 FBgn0037671 995.7833333 82.36 125.1466667 0.119503908 1.444876153 0.950884296 -12 -9 -10.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 3R 9265153 9265158 - 3R_9265153_9265158_- 0.728960091 0.654092501 0.691526296 0.052939388 Aats-trp FBtr0081981 9265025 9265303 3R - 9265098 9265182 3'utr Aats-trp FlyBase G49330.1 TCTATGTAAATAGCTATACAGAATTGATCTATGCCTTGGCTCTGAGTCCGTGTGGCGCCCACTTAATGCATCGTTGTACTCGCTA 188 9265159 0.816930697 15 173 1501 0.92760181 1.834632606 0.045248869 0.14893617 0.2760181 188 14 2 205 3R:9265098-9265182 6 Aats-trp FBtr0081981 9265025 9265303 TGATCT 6mer3-8 dme-bantam-3p 3R - 9265097 9265182 3'utr Aats-trp FlyBase G37261.1 TCTATGTAAATAGCTATACAGAATTGATCTATGCCTTGGCTCTGAGTCCGTGTGGCGCCCACTTAATGCATCGTTGTACTCGCTAT 115 9265159 0.825906891 12 108 907 0.924731183 2.235528447 0.032258065 0.426086957 0.64516129 115 14 0 172 3R:9265097-9265182 6 139 4072 FBgn0010803 589.9133333 43.03333333 65.91666667 0.235627832 3.230054222 2.108723135 1 1 1 0.1 dme-miR-184-3p 6mer2-7 CCGTCC 3R 9336935 9336940 + 3R_9336935_9336940_+ 0.999663725 0.999984101 0.999823913 0.000226557 CG8121 FBtr0082019|FBtr0082017|FBtr0082018 9336879|9336879|9336879 9337256|9337459|9337256 3R + 9336893 9336949 3'utr CG8121 FlyBase G41324.1 CCATCCATCTATGGGGCTCACAACGAAATTGCACAATCTAGACCGTCCGAATGCAGC 33 9336929 0.740431468 6 25 132 0.769230769 0.698970004 0.538461538 0.151515152 0.282051282 33 4 5 30 3R:9336893-9336949 6 CG8121 FBtr0082018|FBtr0082019|FBtr0082017 9336879|9336879|9336879 9337256|9337256|9337459 CCGTCC 6mer2-7 dme-miR-184-3p 3R + 9336893 9336949 3'utr CG8121 FlyBase G31182.1 CCATCCATCTATGGGGCTCACAACGAAATTGCACAATCTAGACCGTCCGAATGCAGC 37 9336930 0.691141085 6 29 143 0.770833333 0.723103684 0.4375 0.243243243 0.416666667 37 5 6 37 3R:9336893-9336949 6 27.5 4073 FBgn0037680 158.3566667 13.87333333 21.06666667 0.173658619 1.982220086 1.305379747 6 5 5.5 0.1 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 9337092 9337099 + 3R_9337092_9337099_+ 0.631135033 0.631135117 0.631135075 7.07E-08 CG8121 FBtr0082019|FBtr0082017|FBtr0082018 9336879|9336879|9336879 9337256|9337459|9337256 3R + 9337060 9337123 3'utr CG8121 FlyBase G41326.1 CCGCGAATCAGCGTAATTAGTTGTAAGTCTATTCCGTCCAAACGCATATGTTTTTTGTATACTG 2080 9337091 0.771501834 9 2052 17253 0.987304274 2.367914739 0.185780787 0.118269231 0.223867964 2080 21 9 2333 3R:9337060-9337123 8 CG8121 FBtr0082018|FBtr0082019|FBtr0082017 9336879|9336879|9336879 9337256|9337256|9337459 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R + 9337063 9337146 3'utr CG8121 FlyBase G31184.1 CGAATCAGCGTAATTAGTTGTAAGTCTATTCCGTCCAAACGCATATGTTTTTTGTATACTGTTGAAGAATCGCTGTCTTTATGT 1227 9337091 0.793610762 11 1204 9760 0.984324324 2.260309946 0.165945946 0.380603097 0.589189189 1227 20 9 1821 3R:9337063-9337146 8 1650 4074 FBgn0037680 158.3566667 13.87333333 21.06666667 10.41951712 118.9332052 78.32278481 1 1 1 0.1 dme-miR-263a-5p 6mer3-8 GTGCCA 3R 9358416 9358421 + 3R_9358416_9358421_+ 0.814374814 0.541460967 0.677917891 0.192979199 CG45050 FBtr0344364|FBtr0344370|FBtr0344363|FBtr0344367|FBtr0344369|FBtr0344365|FBtr0344368|FBtr0344366 9358403|9358403|9358403|9358403|9358403|9358403|9358403|9358403 9359189|9359189|9362994|9362994|9359189|9362994|9359189|9362994 3R + 9358398 9358516 stop_codon CG45050 FlyBase G41342.2 GATTTGAATTTCGATATTGTGCCAGTAACAGTAACAGTAGCCGTAGAATGATAATAACCAACTACACATGATAAGAGTACATATATATATATATGCTGCGCTATAACAAGGAAAGCAAC 57 9358415 0.973300235 18 53 331 0.9375 1.77815125 0.1875 0.105263158 0.203125 57 4 0 60 3R:9358398-9358516 6 CG45050 FBtr0344367|FBtr0344363|FBtr0344370|FBtr0344364|FBtr0344366|FBtr0344368|FBtr0344365|FBtr0344369 9358403|9358403|9358403|9358403|9358403|9358403|9358403|9358403 9362994|9362994|9359189|9359189|9362994|9359189|9362994|9359189 GTGCCA 6mer3-8 dme-miR-263a-5p 3R + 9358394 9358516 stop_codon CG45050 FlyBase G31201.1 AAAAGATTTGAATTTCGATATTGTGCCAGTAACAGTAACAGTAGCCGTAGAATGATAATAACCAACTACACATGATAAGAGTACATATATATATATATGCTGCGCTATAACAAGGAAAGCAAC 33 9358414 0.970867391 13 31 182 0.944444444 1.707570176 0.222222222 0.484848485 0.685185185 33 3 0 51 3R:9358394-9358516 6 20.5 4075 FBgn0266410 13462.35667 672.7966667 1034.65 0.001522765 0.03046983 0.019813463 1 2 1.5 0.1 dme-miR-307a-3p 6mer2-7 GTTGTG 3R 9359487 9359492 + 3R_9359487_9359492_+ 0.999998315 0.999529164 0.99976374 0.000331704 CG45050 FBtr0344363|FBtr0344367|FBtr0344365|FBtr0344366 9358403|9358403|9358403|9358403 9362994|9362994|9362994|9362994 3R + 9359465 9359516 3'utr CG45050 FlyBase G41346.1 AAAAGAAACAAAGAATAACGCAGTTGTGTAGAGCTCCCTAAAAAGTTTGCTA 7 9359489 0.964368623 5 7 41 1 0.84509804 0.142857143 0 0 7 0 0 7 3R:9359465-9359516 6 CG45050 FBtr0344367|FBtr0344363|FBtr0344366|FBtr0344365 9358403|9358403|9358403|9358403 9362994|9362994|9362994|9362994 GTTGTG 6mer2-7 dme-miR-307a-3p 3R + 9359443 9359503 3'utr CG45050 FlyBase G31204.1 AAAATGTAAAAAAAACCTGAAGAAAAGAAACAAAGAATAACGCAGTTGTGTAGAGCTCCCT 8 9359488 0.789101953 4 7 28 1 1 0 0.125 0.3 8 0 0 10 3R:9359443-9359503 6 6 4076 FBgn0266410 13462.35667 672.7966667 1034.65 0.000445687 0.008917999 0.005799062 -2 -1 -1.5 0.1 dme-miR-33-5p 6mer2-7 AATGCA 3R 9359684 9359689 + 3R_9359684_9359689_+ 0.957480103 0.975819799 0.966649951 0.012968126 CG45050 FBtr0344363|FBtr0344367|FBtr0344365|FBtr0344366 9358403|9358403|9358403|9358403 9362994|9362994|9362994|9362994 3R + 9359664 9359846 3'utr CG45050 FlyBase G41348.1 TTAGTGAATCAAAGCAGGCGAATGCAGTGCAAGCGGCGTTTTTTCTTCGTTTTACTTTTTGCCCTCCTGTCCCTCTAACATTAAATTGAATTGATTTTAATTTTCTGATTTGCGATGAATTATATATATATATATGCATAATATTAACTATATCTACATCTATATATGTATGGTAGGATATGT 175 9359686 0.973776482 25 169 1043 0.970149254 1.989004616 0.263681592 0.125714286 0.23880597 175 5 1 195 3R:9359664-9359846 6 CG45050 FBtr0344367|FBtr0344363|FBtr0344366|FBtr0344365 9358403|9358403|9358403|9358403 9362994|9362994|9362994|9362994 AATGCA 6mer2-7 dme-miR-33-5p 3R + 9359531 9359791 3'utr CG45050 FlyBase G31205.1 CGCTAGACACGAGCGAGAGAGAGTATAGCTATATAGAGAGAGAGAGAGAGAGCGGAGAAGCGCGATTAGTGTAAAGCAACGTGGAGCATAACAACTCCCCTATACATAGAAATCTAAATATAATTATAATTAATTAGTGAATCAAAGCAGGCGAATGCAGTGCAAGCGGCGTTTTTTCTTCGTTTTACTTTTTGCCCTCCTGTCCCTCTAACATTAAATTGAATTGATTTTAATTTTCTGATTTGCGATGAATTATATATA 155 9359686 0.990584733 28 143 877 0.932773109 1.443262987 0.256302521 0.361290323 0.584033613 155 9 7 222 3R:9359531-9359791 6 75 4077 FBgn0266410 13462.35667 672.7966667 1034.65 0.00557109 0.111474987 0.072488281 -2 -2 -2 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 3R 9368024 9368029 - 3R_9368024_9368029_- 0.999804745 1 0.999902373 0.000138098 FER FBtr0333295|FBtr0082054|FBtr0082053|FBtr0082051|FBtr0082052|FBtr0333296 9367601|9367601|9367601|9367601|9367601|9367601 9368240|9368240|9368240|9368240|9368240|9368240 3R - 9367962 9368079 3'utr FER FlyBase G49345.1 ATATATATTTTCTAGCCATGTAAATGTAAATTTCGATGTGTACTGTAGTGTGTGTTTGCCTGACTGAGCGTATGTTATAAATCCTTAATGTGCCAAAAACCGCAAGAGATCTTAAAAC 50 9368022 0.983521793 18 49 380 0.981481481 1.72427587 0.185185185 0.08 0.148148148 50 1 0 53 3R:9367962-9368079 6 FER FBtr0082052|FBtr0333296|FBtr0082053|FBtr0082051|FBtr0333295|FBtr0082054 9367601|9367601|9367601|9367601|9367601|9367601 9368240|9368240|9368240|9368240|9368240|9368240 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 9367976 9368077 3'utr FER FlyBase G37273.1 ATATATTTTCTAGCCATGTAAATGTAAATTTCGATGTGTACTGTAGTGTGTGTTTGCCTGACTGAGCGTATGTTATAAATCCTTAATGTGCCAAAAACCGCA 26 9368021 0.988657695 13 24 224 0.888888889 1.505149978 0.416666667 0.346153846 0.527777778 26 4 0 32 3R:9367976-9368077 6 23 4078 FBgn0000723 580.6066667 19.26 29.57333333 0.039613737 1.194184839 0.777727683 -7 -8 -7.5 0.1 dme-miR-276a-3p 6mer2-7 GTTCCT 3R 9407808 9407813 + 3R_9407808_9407813_+ 0.999989874 0.999822497 0.999906185 0.00011837 CG8135 FBtr0082030 9407708 9407857 3R + 9407741 9407825 3'utr CG8135 FlyBase G41359.1 TCGTTACCGAGTATCTCAATATTTCGCTCGCGCTTAAGTATTTCCCGATGCCACTGCTGCTGCTGCTGTTCCTTTACACCCATGT 39 9407814 0.982540892 12 37 357 0.954545455 1.62324929 0.045454545 0.128205128 0.227272727 39 2 0 42 3R:9407741-9407825 6 CG8135 FBtr0082030 9407708 9407857 GTTCCT 6mer2-7 dme-miR-276a-3p 3R + 9407765 9407825 3'utr CG8135 FlyBase G31212.1 CGCTCGCGCTTAAGTATTTCCCGATGCCACTGCTGCTGCTGCTGTTCCTTTACACCCATGT 32 9407802 0.766737283 11 29 303 0.953488372 1.311753861 0 0.25 0.441860465 32 1 1 41 3R:9407765-9407825 6 27.5 4079 FBgn0037689 259 11.38666667 17.50333333 0.106177606 2.415105386 1.571129309 -6 6 0 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 9417032 9417038 + 3R_9417032_9417038_+ 0.704339887 0.752434474 0.72838718 0.034008018 alpha-Man-II FBtr0082031|FBtr0082031|FBtr0082031|FBtr0334302|FBtr0334302|FBtr0334302 9416737|9416737|9416737|9416737|9416737|9416737 9417264|9417264|9417264|9417264|9417264|9417264 3R + 9417023 9417061 3'utr alpha-Man-II FlyBase G41367.1 ACGTTTTTTTGTGATATCCATCCAGTCCCACAGCAAGCA 10 9417043 0.954162842 4 10 57 1 1 0.3 0 0 10 0 0 10 3R:9417023-9417061 7 alpha-Man-II FBtr0334302|FBtr0334302|FBtr0334302|FBtr0082031|FBtr0082031|FBtr0082031 9416737|9416737|9416737|9416737|9416737|9416737 9417264|9417264|9417264|9417264|9417264|9417264 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 9417023 9417060 3'utr alpha-Man-II FlyBase G31216.1 ACGTTTTTTTGTGATATCCATCCAGTCCCACAGCAAGC 12 9417031 0.958834939 3 12 90 1 1.255272505 0.166666667 0.5 0.666666667 12 0 0 18 3R:9417023-9417060 7 10.5 4080 FBgn0011740 533.3733333 16.09 24.62333333 0.019686024 0.652579242 0.4264248 -11 1 -5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 9446629 9446634 + 3R_9446629_9446634_+ 0.959031462 0.999999497 0.979515479 0.028968751 ps FBtr0082037|FBtr0082037|FBtr0082037|FBtr0111030|FBtr0111030|FBtr0111030 9446525|9446525|9446525|9446525|9446525|9446525 9449468|9449468|9449468|9449468|9449468|9449468 3R + 9446611 9446696 3'utr ps FlyBase G41394.1 ACGTTTGAACCCACGCACCTGTGAAATTCCCGGGCGGGATTATATATTCCACCAACCAGAAACCCACTCCCGTTACCGATCCCAAT 23 9446637 0.784179718 7 22 111 0.956521739 1.342422681 0.086956522 0 0 23 1 0 22 3R:9446611-9446696 6 ps FBtr0082037|FBtr0082037|FBtr0082037|FBtr0111030|FBtr0111030|FBtr0111030 9446525|9446525|9446525|9446525|9446525|9446525 9449468|9449468|9449468|9449468|9449468|9449468 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 9446612 9446653 3'utr ps FlyBase G31241.1 CGTTTGAACCCACGCACCTGTGAAATTCCCGGGCGGGATTAT 12 9446637 0.666209953 3 12 54 1 1.230448921 0.235294118 0.333333333 0.529411765 12 0 0 17 3R:9446612-9446653 6 14.5 4081 FBgn0261552 4666.596667 115.7866667 177.5266667 0.003107189 0.125230309 0.08167787 -8 -8 -8 0.1 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 9446922 9446929 + 3R_9446922_9446929_+ 0.631136569 0.631136572 0.631136571 0 ps FBtr0082037|FBtr0111030 9446525|9446525 9449468|9449468 3R + 9446714 9446998 3'utr ps FlyBase G41395.1 TAATTTGGCCCTAGAGCCCATTAGACATAGAAACAAAAGCCAAGCAGACACAGGCACATCATTGCAGACTCATTCCAGAGAGAGAAAAGAGGGTACGACTTATTGAGAGAGATATCCCATTCTAAGCATACAACGCATTCCGTGAGACATTCCGATAGACATTCGCAAAGGCTTTCCCAATAAATTCATTGACACTTATAGCGAAATTTCTAGTCAAGTTCTTGCCTCTCACCCATCCGCCAGCATATATGATCCATGATCCATGATCCGTCTTCGATATTGCAC 1093 9446921 0.966116545 44 1050 8281 0.965883245 2.628048173 0.081122062 0.16010979 0.304018196 1093 43 2 1274 3R:9446714-9446998 8 ps FBtr0082037|FBtr0111030 9446525|9446525 9449468|9449468 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 9446751 9446954 3'utr ps FlyBase G31242.1 AGCCAAGCAGACACAGGCACATCATTGCAGACTCATTCCAGAGAGAGAAAAGAGGGTACGACTTATTGAGAGAGATATCCCATTCTAAGCATACAACGCATTCCGTGAGACATTCCGATAGACATTCGCAAAGGCTTTCCCAATAAATTCATTGACACTTATAGCGAAATTTCTAGTCAAGTTCTTGCCTCTCACCCATCCGCC 612 9446921 0.982250215 24 587 4363 0.962039046 2.470802365 0.093275488 0.35130719 0.569414317 612 33 2 887 3R:9446751-9446954 8 755 4082 FBgn0261552 4666.596667 115.7866667 177.5266667 0.161788141 6.520612621 4.252882196 1 1 1 0.1 dme-miR-92b-3p 8mer-m1 GTGCAATT 3R 9447239 9447246 + 3R_9447239_9447246_+ 0.586921727 0.585413752 0.58616774 0.001066246 ps FBtr0082037|FBtr0111030 9446525|9446525 9449468|9449468 3R + 9447049 9447262 3'utr ps FlyBase G41396.1 CCCAACCCAGAAAATTCGCACAGAACAGCAGCATCCGATAGCTTAGGATTATAAGGCAGTAATTAGGTTTAGCAGTTAGGTTGTGCATTGAGTAGATTGAATAAAACACATTCACTTTTCCATGTTGTTTAGGCCTAACGAATTTGTTCGATATACTTACGTGTAGCTGGGCGGATCGCCCAGTTGGCTAGTGCAATTCGTGGGTAACCATGCG 97 9447233 0.984852961 35 84 664 0.885964912 2.004321374 0.201754386 0.164948454 0.289473684 97 13 0 101 3R:9447049-9447262 8 ps FBtr0082037|FBtr0111030 9446525|9446525 9449468|9449468 GTGCAATT 8mer-m1 dme-miR-92b-3p 3R + 9447166 9447264 3'utr ps FlyBase G31245.1 TTCCATGTTGTTTAGGCCTAACGAATTTGTTCGATATACTTACGTGTAGCTGGGCGGATCGCCCAGTTGGCTAGTGCAATTCGTGGGTAACCATGCGTA 33 9447233 0.975344911 14 33 207 1 1.755874856 0.192982456 0.424242424 0.666666667 33 0 0 57 3R:9447166-9447264 8 29.5 4083 FBgn0261552 4666.596667 115.7866667 177.5266667 0.006321523 0.254778904 0.166172218 6 6 6 0.1 dme-miR-2535b-3p 6mer3-8 CCGTGA 3R 9447369 9447374 + 3R_9447369_9447374_+ 0.756098497 0.601888391 0.678993444 0.109043007 ps FBtr0082037|FBtr0111030 9446525|9446525 9449468|9449468 3R + 9447317 9447394 3'utr ps FlyBase G41397.1 GATTTTACCTCAGTGTCAGTTGTAAGGTCGTTAGGTCATTAGGTTAGGCCCACCGTGACCCCTTTTGCAGCCAATTGA 18 9447381 0.738395497 9 16 123 0.85 1.230448921 0.25 0.111111111 0.2 18 3 0 17 3R:9447317-9447394 6 ps FBtr0082037|FBtr0111030 9446525|9446525 9449468|9449468 CCGTGA 6mer3-8 dme-miR-2535b-3p 3R + 9447317 9447390 3'utr ps FlyBase G31246.1 GATTTTACCTCAGTGTCAGTTGTAAGGTCGTTAGGTCATTAGGTTAGGCCCACCGTGACCCCTTTTGCAGCCAA 11 9447372 0.984784711 7 9 76 0.777777778 1.146128036 0 0.454545455 0.666666667 11 4 0 14 3R:9447317-9447390 6 6.5 4084 FBgn0261552 4666.596667 115.7866667 177.5266667 0.001392878 0.056137725 0.036614218 -12 -3 -7.5 0.1 dme-miR-12-5p 6mer3-8 AATACT 3R 9448832 9448837 + 3R_9448832_9448837_+ 0.966613444 0.91011191 0.938362677 0.039952594 ps FBtr0111032|FBtr0302692|FBtr0082037|FBtr0344283|FBtr0111030 9447848|9447848|9446525|9447848|9446525 9455500|9455500|9449468|9455500|9449468 3R + 9448816 9448864 5'utr ps FlyBase G41403.1 AACACTTGCTATGGCTAATACTGCAACTGCAAACCGGCTAGTGAAAAAT 9 9448843 0.909071572 4 9 37 1 1.079181246 0.083333333 0.333333333 0.5 9 0 0 12 3R:9448816-9448864 6 ps FBtr0111032|FBtr0344283|FBtr0082037|FBtr0111030|FBtr0302692 9447848|9447848|9446525|9446525|9447848 9455500|9455500|9449468|9449468|9455500 AATACT 6mer3-8 dme-miR-12-5p 3R + 9448821 9448872 5'utr ps FlyBase G31250.1 TTGCTATGGCTAATACTGCAACTGCAAACCGGCTAGTGAAAAATACAACTTC 6 9448843 0.92836899 3 6 25 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3R:9448821-9448872 6 6.5 4085 FBgn0261552 4666.596667 115.7866667 177.5266667 0.001392878 0.056137725 0.036614218 -11 -11 -11 0.1 dme-miR-980-5p 7mer-A1 AAAAACA 3R 9449286 9449292 + 3R_9449286_9449292_+ 0.782729357 0.782729498 0.782729427 7.07E-08 ps FBtr0111032|FBtr0302692|FBtr0082037|FBtr0344283|FBtr0111030 9447848|9447848|9446525|9447848|9446525 9455500|9455500|9449468|9455500|9449468 3R + 9449282 9449346 5'utr ps FlyBase G41408.1 AAAAAAAAACACATTGCGATTTGTTAGTTGCCAGTCTGAGAACTGCACTTCTTACCTTTTTACTT 43 9449309 0.918239051 12 42 333 0.965517241 1.271066772 0.189655172 0.255813953 0.448275862 43 0 2 56 3R:9449282-9449346 7 ps FBtr0111032|FBtr0344283|FBtr0082037|FBtr0111030|FBtr0302692 9447848|9447848|9446525|9446525|9447848 9455500|9455500|9449468|9449468|9455500 AAAAACA 7mer-A1 dme-miR-980-5p 3R + 9449281 9449342 5'utr ps FlyBase G31252.1 AAAAAAAAAACACATTGCGATTTGTTAGTTGCCAGTCTGAGAACTGCACTTCTTACCTTTTT 16 9449308 0.979999002 10 16 118 1 1.361727836 0.217391304 0.3125 0.52173913 16 0 0 23 3R:9449281-9449342 7 21.5 4086 FBgn0261552 4666.596667 115.7866667 177.5266667 0.004607212 0.18568632 0.121108566 -23 -22 -22.5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 9449595 9449600 + 3R_9449595_9449600_+ 0.986391176 0.9818923 0.984141738 0.003181203 ps FBtr0111032|FBtr0302692|FBtr0344283 9447848|9447848|9447848 9455500|9455500|9455500 3R + 9449576 9449642 3'utr ps FlyBase G41409.1 ACGTCAAAACAAACAATCCACCAAACAATTTCCCTTATTAATTTTAAGTATTGTGCAATTATTAAAC 19 9449604 0.986878758 6 19 167 1 1.322219295 0 0.052631579 0.142857143 19 0 0 21 3R:9449576-9449642 6 ps FBtr0111032|FBtr0344283|FBtr0302692 9447848|9447848|9447848 9455500|9455500|9455500 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 9449562 9449747 3'utr ps FlyBase G31253.1 AGGGGTTTCTTCATACGTCAAAACAAACAATCCACCAAACAATTTCCCTTATTAATTTTAAGTATTGTGCAATTATTAAACATTGTTTCAACGAACATTTCATAACGATTATATGTACATATCTATCTAGAAACGCAGTGTAAAGACAAAAGATGTTAACATCACATTTAAAAAACTCCCTGTTCA 21 9449604 0.989514435 12 18 173 0.852941176 0.763427994 0.117647059 0.428571429 0.647058824 21 1 4 29 3R:9449562-9449747 6 11.5 4087 FBgn0261552 4666.596667 115.7866667 177.5266667 0.002464323 0.09932059 0.064779 -9 -9 -9 0.1 dme-miR-1012-3p 7mer-m8 TTGACTA 3R 9449927 9449933 + 3R_9449927_9449933_+ 0.543216091 0.534608578 0.538912334 0.006086422 ps FBtr0111032|FBtr0302692|FBtr0344283 9447848|9447848|9447848 9455500|9455500|9455500 3R + 9449918 9449944 3'utr ps FlyBase G41412.1 AAATAAAATTTGACTACAAAACCAACA 7 9449927 0.95609763 3 5 23 0.8 0.903089987 0 0.428571429 0.6 7 2 0 8 3R:9449918-9449944 7 ps FBtr0111032|FBtr0344283|FBtr0302692 9447848|9447848|9447848 9455500|9455500|9455500 TTGACTA 7mer-m8 dme-miR-1012-3p 3R + 9449910 9449940 3'utr ps FlyBase G31255.1 CGAAATTTAAATAAAATTTGACTACAAAACC 5 9449927 0.900985604 2 5 22 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:9449910-9449940 7 5.5 4088 FBgn0261552 4666.596667 115.7866667 177.5266667 0.001178589 0.047501152 0.030981261 0 0 0 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 9451274 9451281 + 3R_9451274_9451281_+ 0.645722798 0.636715205 0.641219001 0.006369335 ps FBtr0111032|FBtr0111032|FBtr0111032|FBtr0302692|FBtr0302692|FBtr0302692|FBtr0344283|FBtr0344283|FBtr0344283 9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848 9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500 3R + 9451253 9451297 3'utr ps FlyBase G41415.2 ATACTTATATTTGTACTGGATCTGTGATATGTATTTAAAAACAAC 198 9451273 0.833646553 11 193 2175 0.974358974 2.357934847 0.05982906 0.176767677 0.303418803 198 6 0 228 3R:9451253-9451297 8 ps FBtr0111032|FBtr0111032|FBtr0111032|FBtr0344283|FBtr0344283|FBtr0344283|FBtr0302692|FBtr0302692|FBtr0302692 9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848 9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 9451253 9451301 3'utr ps FlyBase G31256.1 ATACTTATATTTGTACTGGATCTGTGATATGTATTTAAAAACAACAAAG 159 9451273 0.795989041 12 153 1644 0.974895397 2.367355921 0.129707113 0.364779874 0.577405858 159 6 0 233 3R:9451253-9451301 8 177.5 4089 FBgn0261552 4666.596667 115.7866667 177.5266667 0.038036285 1.532991709 0.999849788 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 9453053 9453059 + 3R_9453053_9453059_+ 0.797303648 0.80163369 0.799468669 0.003061843 ps FBtr0111032|FBtr0111032|FBtr0111032|FBtr0302692|FBtr0302692|FBtr0302692|FBtr0344283|FBtr0344283|FBtr0344283 9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848 9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500 3R + 9453030 9453070 3'utr ps FlyBase G41419.1 AAGGTATAAAACGTAGTCGTTAGTGTGATAAATAAAATTAA 11 9453051 0.976462237 6 11 78 1 1.113943352 0.076923077 0.181818182 0.307692308 11 0 0 13 3R:9453030-9453070 7 ps FBtr0111032|FBtr0111032|FBtr0111032|FBtr0344283|FBtr0344283|FBtr0344283|FBtr0302692|FBtr0302692|FBtr0302692 9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848 9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 9453016 9453071 3'utr ps FlyBase G31258.1 ATACACATACACTAAAGGTATAAAACGTAGTCGTTAGTGTGATAAATAAAATTAAT 8 9453052 0.975598725 4 8 52 1 1.041392685 0.181818182 0.375 0.545454545 8 0 0 11 3R:9453016-9453071 7 8.5 4090 FBgn0261552 4666.596667 115.7866667 177.5266667 0.001821456 0.073410871 0.047880131 2 1 1.5 0.1 dme-miR-33-5p 6mer3-8 CAATGC 3R 9505795 9505800 + 3R_9505795_9505800_+ 0.999992614 0.999919349 0.999955982 5.18E-05 CG8149 FBtr0082061 9505704 9505865 3R + 9505754 9505833 3'utr CG8149 FlyBase G41425.1 TTCGGGAGTAGGCCCTATCATGTATCAAACCCCAAAGCCACCAATGCTTGTAGTAATTAAGCAAAAATTCAATAAACACA 12 9505800 0.936535731 4 12 48 1 1.204119983 0.0625 0.333333333 0.5 12 0 0 16 3R:9505754-9505833 6 CG8149 FBtr0082061 9505704 9505865 CAATGC 6mer3-8 dme-miR-33-5p 3R + 9505786 9505836 3'utr CG8149 FlyBase G31260.1 CAAAGCCACCAATGCTTGTAGTAATTAAGCAAAAATTCAATAAACACAAAA 5 9505801 0.962290978 4 4 20 1 0.903089987 0 0.5 0.75 4 0 0 8 3R:9505786-9505836 6 5 4091 FBgn0037700 973.67 104.3033333 159.9166667 0.00513521 0.047937107 0.031266285 -5 -6 -5.5 0.1 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3R 9506042 9506047 - 3R_9506042_9506047_- 0.900260146 0.909298452 0.904779299 0.006391114 rump FBtr0304684|FBtr0082123 9505851|9505851 9507316|9506143 3R - 9506025 9506155 stop_codon rump FlyBase G49389.1 ACATACTTTTAAGTCAGGCAATTCAGTTCAAAAGTTATTCTACGTTTCTTGTCGCCAATTCACACTTCAAACAGCGCGATGACCAATGAAATGAGCTGATATTCCTTATTTGACTCGCAATACGGAATTAA 30 9506045 0.984167922 11 29 228 0.96875 1.491361694 0.3125 0.066666667 0.125 30 1 0 31 3R:9506025-9506155 6 rump FBtr0304684|FBtr0082123 9505851|9505851 9507316|9506143 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3R - 9506025 9506084 3'utr rump FlyBase G37306.1 CAGCGCGATGACCAATGAAATGAGCTGATATTCCTTATTTGACTCGCAATACGGAATTAA 15 9506046 0.828823174 8 15 100 1 1.322219295 0.238095238 0.266666667 0.476190476 15 0 0 21 3R:9506025-9506084 6 11.5 4092 FBgn0267790 1132.323333 61.17 93.53666667 0.01015611 0.188000654 0.122946438 -2 -1 -1.5 0.1 dme-miR-277-3p 6mer2-7 GCATTT 3R 9506816 9506821 - 3R_9506816_9506821_- 0.98709991 0.999999999 0.993549955 0.009121748 rump FBtr0304684 9505851 9507316 3R - 9506675 9506871 5'utr rump FlyBase G49394.1 AGGAAACAATACCGGTTCCGGCGGATTGAACCTAAACAATCTGAATCCCAGCATTTTGGCTGCCGTGGTCGGCAATCTTGGTAACCAGGGAGGGAATTTAAGCAATCCCTTGCTGTCCTCTTCGCTGAGCAACCTGGGTCTCAATCTGGGCAACTCCGGCAATGATGACAACCTGCCGCCAAGCAATGTGGGTCTTT 38 9506816 0.975631526 20 37 228 0.977777778 1.643452676 0.111111111 0.157894737 0.288888889 38 1 0 44 3R:9506675-9506871 6 rump FBtr0304684 9505851 9507316 GCATTT 6mer2-7 dme-miR-277-3p 3R - 9506794 9506859 5'utr rump FlyBase G37311.1 CGGTTCCGGCGGATTGAACCTAAACAATCTGAATCCCAGCATTTTGGCTGCCGTGGTCGGCAATCT 9 9506816 0.964273993 7 9 46 1 1.041392685 0.090909091 0.222222222 0.363636364 9 0 0 11 3R:9506794-9506859 6 11.5 4093 FBgn0267790 1132.323333 61.17 93.53666667 0.01015611 0.188000654 0.122946438 -5 -5 -5 0.1 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 9507272 9507278 - 3R_9507272_9507278_- 0.793855083 0.79146018 0.792657632 0.00169345 rump FBtr0304684 9505851 9507316 3R - 9507095 9507364 stop_codon rump FlyBase G49398.2 AGAAGCTCAAGCAGGTCTTCAAGCTGGCCGGCAAGGTGCAGAGCGTAGACCTTTCACTGGACAAGGAGGGCAACAGCCGCGGTTTTGCTGTGATCGAGTACGACCATCCGGTGGAGGCTGTTCAGGCCATTTCCATGCTGGATCGTCAGATGCTATTCGACCGTCGTATGACCGTGCGCCTGGACCGAATTCCGGATAAGAATGAAGGCATAAAGCTGCCCGAGGGCTTGGGAGGTGTGGGCATCGGCCTGGGACCCAACGGCGAGCCAC 159 9507280 0.994492437 32 153 828 0.97382199 1.792391689 0.188481675 0.169811321 0.308900524 159 3 2 186 3R:9507095-9507364 7 rump FBtr0304684 9505851 9507316 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R - 9507131 9507318 stop_codon rump FlyBase G37314.1 AGACCTTTCACTGGACAAGGAGGGCAACAGCCGCGGTTTTGCTGTGATCGAGTACGACCATCCGGTGGAGGCTGTTCAGGCCATTTCCATGCTGGATCGTCAGATGCTATTCGACCGTCGTATGACCGTGCGCCTGGACCGAATTCCGGATAAGAATGAAGGCATAAAGCTGCCCGAGGGCTTGGGAG 89 9507280 0.973948721 21 82 503 0.943262411 2.123851641 0.219858156 0.449438202 0.65248227 89 8 0 133 3R:9507131-9507318 7 67.5 4094 FBgn0267790 1132.323333 61.17 93.53666667 0.059611948 1.103482099 0.721642137 2 2 2 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 3R 9511258 9511263 - 3R_9511258_9511263_- 0.999697041 0.962439294 0.981068168 0.026345172 Ras85D FBtr0082122 9510559 9511507 3R - 9511228 9511292 3'utr Ras85D FlyBase G49408.1 ATGTACGTCGAAATGATTTTGTGAATGTGTGTGTTTTGTGTCGTTTGAAAGGCTGCGAGGCGCCC 42 9511275 0.993234758 8 40 474 0.959183673 1.371067862 0.102040816 0.142857143 0.265306122 42 1 1 47 3R:9511228-9511292 6 Ras85D FBtr0082122 9510559 9511507 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 9511226 9511291 3'utr Ras85D FlyBase G37326.1 TGTACGTCGAAATGATTTTGTGAATGTGTGTGTTTTGTGTCGTTTGAAAGGCTGCGAGGCGCCCTT 24 9511275 0.992974688 7 21 249 0.942857143 1.51851394 0.285714286 0.333333333 0.542857143 24 2 0 33 3R:9511226-9511291 6 25 4095 FBgn0003205 1314.34 81.98666667 125.6566667 0.019020953 0.304927631 0.198954824 12 12 12 0.1 dme-miR-92b-3p 8mer-m1 GTGCAATT 3R 9511342 9511349 - 3R_9511342_9511349_- 0.596698315 0.596653798 0.596676056 3.15E-05 Ras85D FBtr0082122 9510559 9511507 3R - 9511330 9511379 3'utr Ras85D FlyBase G49409.1 AAACACACACATGTGGGAGCGTGTTGGTCGGTGCAATTGTCAGATAAAAG 28 9511343 0.864359564 6 27 156 0.967741935 1.477121255 0.258064516 0.107142857 0.193548387 28 1 0 30 3R:9511330-9511379 8 Ras85D FBtr0082122 9510559 9511507 GTGCAATT 8mer-m1 dme-miR-92b-3p 3R - 9511325 9511365 3'utr Ras85D FlyBase G37327.1 GGGAGCGTGTTGGTCGGTGCAATTGTCAGATAAAAGAAGAG 8 9511343 0.828602163 3 7 46 1 1.079181246 0.5 0.25 0.5 8 0 0 12 3R:9511325-9511365 8 15.5 4096 FBgn0003205 1314.34 81.98666667 125.6566667 0.011792991 0.189055131 0.123351991 -6 -6 -6 0.1 dme-miR-33-5p 6mer3-8 CAATGC 3R 9511383 9511388 - 3R_9511383_9511388_- 0.971430675 0.992736742 0.982083709 0.015065617 Ras85D FBtr0082122 9510559 9511507 3R - 9511386 9511474 3'utr Ras85D FlyBase G49410.1 TTCTTCAAATGTCGCCTGTTTGTCTGTATGTGCGTCGGCGAATCGCCGATCGTCCTGGGCTCGATGGTTTGTCCATTTTGGACACACAA 20 9511418 0.770299895 9 20 146 1 1.414973348 0.038461538 0.25 0.423076923 20 0 0 26 3R:9511386-9511474 2 Ras85D FBtr0082122 9510559 9511507 CAATGC 6mer3-8 dme-miR-33-5p 3R - 9511385 9511447 3'utr Ras85D FlyBase G37328.1 ATGTGCGTCGGCGAATCGCCGATCGTCCTGGGCTCGATGGTTTGTCCATTTTGGACACACAAT 10 9511405 0.978535002 7 10 71 1 1.146128036 0.285714286 0.3 0.5 10 0 0 14 3R:9511385-9511447 3 1.5 4097 FBgn0003205 1314.34 81.98666667 125.6566667 0.001141257 0.018295658 0.011937289 30 17 23.5 0.1 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 9536064 9536070 - 3R_9536064_9536070_- 0.621146569 0.564108365 0.592627467 0.040332098 mura FBtr0082116 9535623 9539095 3R - 9536022 9536096 3'utr mura FlyBase G49422.1 ACAAACAAAAAAAATTATAAAGTTTTGCTGTGATGTACGTTATATATATTTAATTACATAAAATGCAATAAAATT 185 9536072 0.991835807 10 178 1989 0.964444444 2.035429738 0.062222222 0.183783784 0.328888889 185 7 1 217 3R:9536022-9536096 7 mura FBtr0082116 9535623 9539095 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R - 9536043 9536096 3'utr mura FlyBase G37344.1 ACAAACAAAAAAAATTATAAAGTTTTGCTGTGATGTACGTTATATATATTTAAT 135 9536072 0.891468887 10 128 1418 0.930693069 2.274157849 0.059405941 0.333333333 0.554455446 135 14 0 188 3R:9536043-9536096 7 158.5 4098 FBgn0037705 215.4033333 4.16 6.31 0.73582891 38.10096154 25.11885895 2 2 2 0.1 dme-miR-79-3p 6mer3-8 TAGCTT 3R 9538817 9538822 - 3R_9538817_9538822_- 1 0.99999997 0.999999985 0 mura FBtr0082118|FBtr0082117|FBtr0082116 9538152|9538152|9535623 9539095|9539095|9539095 3R - 9538766 9538840 3'utr mura FlyBase G49428.1 AACTCGCCGCCTCTTCAATAGCTTGTCTTAGACATTAGTTCGTATGTGAGTAATGGTAACCGTAATTAGGAGTAA 24 9538822 0.987243422 7 24 208 1 1.397940009 0 0.041666667 0.08 24 0 0 25 3R:9538766-9538840 6 mura FBtr0082118|FBtr0082117|FBtr0082116 9538152|9538152|9535623 9539095|9539095|9539095 TAGCTT 6mer3-8 dme-miR-79-3p 3R - 9538795 9538838 3'utr mura FlyBase G37348.1 CTCGCCGCCTCTTCAATAGCTTGTCTTAGACATTAGTTCGTATG 13 9538813 0.845101812 4 10 116 0.823529412 0.84509804 0.058823529 0.230769231 0.411764706 13 2 1 14 3R:9538795-9538838 6 16.5 4099 FBgn0037705 215.4033333 4.16 6.31 0.076600486 3.966346154 2.614896989 0 -9 -4.5 0.1 dme-miR-79-3p 6mer2-7 AGCTTT 3R 9539063 9539068 - 3R_9539063_9539068_- 0.961743751 0.996430902 0.979087326 0.024527484 mura FBtr0082118|FBtr0082117|FBtr0082116 9538152|9538152|9535623 9539095|9539095|9539095 3R - 9539014 9539076 3'utr mura FlyBase G49430.1 ACACCTCAAGCTTTCGCTTTTCCGGGCGATGAGTGATCGGGACAGAGGAGCATTCCGGGCGTG 13 9539064 0.974933047 6 12 76 1 1.204119983 0.0625 0.230769231 0.375 13 0 0 16 3R:9539014-9539076 6 mura FBtr0082118|FBtr0082117|FBtr0082116 9538152|9538152|9535623 9539095|9539095|9539095 AGCTTT 6mer2-7 dme-miR-79-3p 3R - 9539044 9539083 3'utr mura FlyBase G37349.1 ATTCCACACACCTCAAGCTTTCGCTTTTCCGGGCGATGAG 5 9539057 0.976117145 3 5 35 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 3R:9539044-9539083 6 7.5 4100 FBgn0037705 215.4033333 4.16 6.31 0.034818403 1.802884615 1.18858954 -4 -11 -7.5 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 9557507 9557514 + 3R_9557507_9557514_+ 0.625364269 0.625364138 0.625364204 1.41E-07 CG8199 FBtr0082067 9557435 9557776 3R + 9557435 9557527 stop_codon CG8199 FlyBase G41466.2 AGATTCCAGATAGGTGCCATAAAGATGCTAACAAATCAGAAATCAAAACGAACCGAGAGACTCGATCGAAAGTGCATTTATTATGATTAAGCA 26 9557513 0.873772367 11 21 135 0.909090909 1.176091259 0.212121212 0.153846154 0.333333333 26 2 1 30 3R:9557435-9557527 8 CG8199 FBtr0082067 9557435 9557776 TGCATTTA 8mer-A1 dme-miR-277-3p 3R + 9557471 9557533 3'utr CG8199 FlyBase G31285.2 CAGAAATCAAAACGAACCGAGAGACTCGATCGAAAGTGCATTTATTATGATTAAGCAATAGGC 14 9557513 0.979985702 6 10 72 0.857142857 1.255272505 0.380952381 0.428571429 0.619047619 14 3 0 18 3R:9557471-9557533 8 10.5 4101 FBgn0037709 100.1133333 7.073333333 10.93 0.104881135 1.484448633 0.960658737 -6 -6 -6 0.1 "dme-miR-995-3p,dme-miR-998-3p" 6mer2-7 GGTGCT 3R 9572470 9572475 - 3R_9572470_9572475_- 0.9999995 0.936506362 0.968252931 0.044896402 CG9399 FBtr0334657|FBtr0082110 9571909|9571909 9572496|9572496 3R - 9572381 9572547 stop_codon CG9399 FlyBase G49468.1 AGTCAGGAGAAGCTGAAGCAGGAGCAGCAGCAGCCGGCGGTGCAAAATTAGATACATATCGAATCGAATACCGGTGCTGTCCCCTTTATATAGACTTTAATCGAACTTTTATGTACATACAAATCCCACAACGCGCAACGTAAACGAAAGGATTAAGAGGAAGCTGT 125 9572457 0.98714771 18 120 1049 0.965034965 1.838849091 0.174825175 0.128 0.237762238 125 4 1 138 3R:9572381-9572547 6 CG9399 FBtr0334657|FBtr0082110 9571909|9571909 9572496|9572496 GGTGCT 6mer2-7 "dme-miR-995-3p,dme-miR-998-3p" 3R - 9572420 9572498 stop_codon CG9399 FlyBase G37384.1 AGATACATATCGAATCGAATACCGGTGCTGTCCCCTTTATATAGACTTTAATCGAACTTTTATGTACATACAAATCCCA 58 9572457 0.991124936 12 50 530 0.904761905 1.181843588 0.202380952 0.327586207 0.535714286 58 4 4 76 3R:9572420-9572498 6 68 4102 FBgn0037715 98.66666667 11.74333333 17.94 0.689189189 5.790519444 3.790412486 -18 -18 -18 0.1 dme-miR-965-3p 7mer-m8 TACGCTT 3R 9575015 9575021 - 3R_9575015_9575021_- 0.620204796 0.620204818 0.620204807 0 Kap-alpha3 FBtr0301189|FBtr0082108|FBtr0082106|FBtr0082107 9574962|9574482|9574962|9574482 9575473|9575473|9575473|9575473 3R - 9574972 9575075 3'utr Kap-alpha3 FlyBase G49473.1 AGATTTCAAAAAGAATGTAGACCTATTTGATTTATATGAAATTATTTAAATATTTACGCTTCTGATTTGTAATTGAAATTACATATGTATACATTTCTAACATG 76 9575022 0.990178922 12 76 761 1 1.954242509 0.033333333 0.171052632 0.3 76 0 0 90 3R:9574972-9575075 7 Kap-alpha3 FBtr0082108|FBtr0301189|FBtr0082107|FBtr0082106 9574482|9574962|9574482|9574962 9575473|9575473|9575473|9575473 TACGCTT 7mer-m8 dme-miR-965-3p 3R - 9574992 9575070 3'utr Kap-alpha3 FlyBase G37387.1 TCAAAAAGAATGTAGACCTATTTGATTTATATGAAATTATTTAAATATTTACGCTTCTGATTTGTAATTGAAATTACAT 36 9575022 0.843972863 10 35 331 0.955555556 1.633468456 0.044444444 0.25 0.4 36 2 0 43 3R:9574992-9575070 7 47 4103 FBgn0027338 3256.33 173.6 265.9533333 0.014433427 0.270737327 0.176722733 1 1 1 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 3R 9575200 9575205 - 3R_9575200_9575205_- 0.920159134 0.90995465 0.915056892 0.007215671 Kap-alpha3 FBtr0301189|FBtr0082108|FBtr0082106|FBtr0082107 9574962|9574482|9574962|9574482 9575473|9575473|9575473|9575473 3R - 9575186 9575236 3'utr Kap-alpha3 FlyBase G49475.1 CCGCTGCAGCCGTTTTAGCTTCTCTCAATTCTGTGTTAACAAAATTACAAA 45 9575208 0.750132505 4 41 459 0.92 1.662757832 0.08 0.111111111 0.2 45 4 0 46 3R:9575186-9575236 6 Kap-alpha3 FBtr0082108|FBtr0301189|FBtr0082107|FBtr0082106 9574482|9574962|9574482|9574962 9575473|9575473|9575473|9575473 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 9575185 9575228 3'utr Kap-alpha3 FlyBase G37389.1 GCCGTTTTAGCTTCTCTCAATTCTGTGTTAACAAAATTACAAAA 23 9575208 0.770431835 5 22 235 0.965517241 1.447158031 0.172413793 0.260869565 0.413793103 23 1 0 28 3R:9575185-9575228 6 33 4104 FBgn0027338 3256.33 173.6 265.9533333 0.010134108 0.190092166 0.124081919 3 3 3 0.1 dme-miR-11-3p 7mer-m1 TGTGATG 3R 9589304 9589310 + 3R_9589304_9589310_+ 0.612071118 0.612071121 0.612071119 0 P58IPK FBtr0082074 9589281 9589581 3R + 9589238 9589339 stop_codon P58IPK FlyBase G41500.1 TTCCAACACGGGTCGCCGTTCCAGTTCAAGTTCCACTTCAATTAGTCAGCCAGCAGCCATTTGCTTTGTGATGTCCTAGCCGCGATCCCCGATATCCTTTAA 31 9589303 0.984221303 14 29 226 0.942857143 1.51851394 0.114285714 0.129032258 0.228571429 31 2 0 33 3R:9589238-9589339 7 P58IPK FBtr0082074 9589281 9589581 TGTGATG 7mer-m1 dme-miR-11-3p 3R + 9589277 9589328 stop_codon P58IPK FlyBase G31308.1 AATTAGTCAGCCAGCAGCCATTTGCTTTGTGATGTCCTAGCCGCGATCCCCG 15 9589303 0.666256852 5 12 99 0.92 1.06069784 0.24 0.466666667 0.68 15 1 1 23 3R:9589277-9589328 7 17.5 4105 FBgn0037718 1190.153333 64.61333333 98.40666667 0.014703988 0.270841931 0.17783348 1 1 1 0.1 dme-miR-980-5p 6mer3-8 GAAAAA 3R 9589517 9589522 - 3R_9589517_9589522_- 0.999397216 0.999592775 0.999494995 0.00013831 bocksbeutel FBtr0100537|FBtr0082105 9589466|9589466 9589729|9589773 3R - 9589479 9589586 3'utr bocksbeutel FlyBase G49488.1 CAACTCAATTTGCCAAGTCTTTAATTGCTTGTTCTCGCATATTGTTTCTTTTTATACATAATTAGAAAAATGTACTACATTATAATTATTGTATTGTATTAAATAAAC 174 9589516 0.982220096 8 173 1289 0.99537037 2.33243846 0.041666667 0.224137931 0.375 174 1 0 215 3R:9589479-9589586 6 bocksbeutel FBtr0100537|FBtr0082105 9589466|9589466 9589729|9589773 GAAAAA 6mer3-8 dme-miR-980-5p 3R - 9589494 9589572 3'utr bocksbeutel FlyBase G37406.1 AAGTCTTTAATTGCTTGTTCTCGCATATTGTTTCTTTTTATACATAATTAGAAAAATGTACTACATTATAATTATTGTA 117 9589516 0.901874706 8 114 824 0.994117647 2.227886705 0.047058824 0.35042735 0.552941176 117 1 0 169 3R:9589494-9589572 6 138 4106 FBgn0037719 379.4166667 31.98333333 49.09 0.363716231 4.314747264 2.81116317 -6 -6 -6 0.1 dme-miR-986-5p 6mer3-8 ATTCGA 3R 9633826 9633831 - 3R_9633826_9633831_- 0.999999991 0.999466009 0.999733 0.000377595 Scm FBtr0082102|FBtr0306008 9633357|9633659 9634337|9634337 3R - 9633780 9633863 3'utr Scm FlyBase G49505.1 ATGTGAAATAGTTCTCAATTGGACACAAAATGATTCGACTTTTTCGAAAACTGGAGCTCGGCTACCAAAATCGCAATGCACATA 27 9633822 0.975357758 13 25 176 0.945945946 1.544068044 0.459459459 0.222222222 0.432432432 27 2 0 35 3R:9633780-9633863 6 Scm FBtr0082102|FBtr0306008 9633357|9633659 9634337|9634337 ATTCGA 6mer3-8 dme-miR-986-5p 3R - 9633799 9633863 3'utr Scm FlyBase G37428.1 ATGTGAAATAGTTCTCAATTGGACACAAAATGATTCGACTTTTTCGAAAACTGGAGCTCGGCTAC 17 9633821 0.671716618 12 17 111 1 1.397940009 0.16 0.294117647 0.52 17 0 0 25 3R:9633799-9633863 6 8.5 4107 FBgn0003334 1178.256667 35.08 53.90333333 0.007214048 0.242303307 0.157689691 -9 -10 -9.5 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 3R 9634290 9634295 - 3R_9634290_9634295_- 0.718279954 0.543759377 0.631019665 0.1234047 Scm FBtr0082102|FBtr0306008 9633357|9633659 9634337|9634337 3R - 9634210 9634324 3'utr Scm FlyBase G49507.1 AAGTTTCAGGCAGCGGACTCGGTTCGGGTTTGACTTATATAGAAATTGTTAACAAATTAGTACCTCCCTTTAACGTAAAGCAAAGCAAACATGAACGATATTCATAGATGTGTTA 30 9634295 0.98122841 12 27 195 0.909090909 1.477121255 0.181818182 0.1 0.181818182 30 3 0 30 3R:9634210-9634324 6 Scm FBtr0082102|FBtr0306008 9633357|9633659 9634337|9634337 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 9634244 9634317 3'utr Scm FlyBase G37430.1 AGGCAGCGGACTCGGTTCGGGTTTGACTTATATAGAAATTGTTAACAAATTAGTACCTCCCTTTAACGTAAAGC 14 9634295 0.98226369 6 11 86 0.9 1.255272505 0.4 0.428571429 0.6 14 2 0 18 3R:9634244-9634317 6 11 4108 FBgn0003334 1178.256667 35.08 53.90333333 0.009335827 0.313568985 0.204069012 0 0 0 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 3R 9684472 9684478 - 3R_9684472_9684478_- 0.782901399 0.782883423 0.782892411 1.27E-05 eca FBtr0082098 9684467 9684666 3R - 9684467 9684492 3'utr eca FlyBase G49522.1 TAATAAAATCCATTGTACAAAACGAG 25 9684480 0.623698592 3 25 87 1 1.591064607 0 0.44 0.641025641 25 0 0 39 3R:9684467-9684492 7 eca FBtr0082098 9684467 9684666 GTACAAA 7mer-A1 dme-miR-305-5p 3R - 9684468 9684498 3'utr eca FlyBase G37441.1 GTAATTTAATAAAATCCATTGTACAAAACGA 20 9684480 0.699485405 2 19 77 1 1.462397998 0.034482759 0.4 0.586206897 20 0 0 29 3R:9684468-9684498 7 22 4109 FBgn0069242 341.4133333 44.61 67.42 0.064438022 0.493162968 0.326312667 2 2 2 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 3R 9684601 9684606 - 3R_9684601_9684606_- 0.999982214 0.999999941 0.999991078 1.25E-05 eca FBtr0082098 9684467 9684666 3R - 9684503 9684635 3'utr eca FlyBase G49523.1 ACTGGCCAACCACTGGCCTCATTGTTCCGTGTGTTTCCCTCATTTGGCAGGAATTGCGAATTTCATCGATGGATCGTCATCCACCCAACCAGCCACTGGCCTCGACTCCAAGCACTTCTAGTTGTAATTTCTT 64 9684612 0.882363629 22 60 474 0.902777778 1.812913357 0.111111111 0.125 0.222222222 64 7 0 65 3R:9684503-9684635 6 eca FBtr0082098 9684467 9684666 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 9684581 9684633 3'utr eca FlyBase G37442.1 TGGCCAACCACTGGCCTCATTGTTCCGTGTGTTTCCCTCATTTGGCAGGAATT 21 9684611 0.777805302 9 20 178 0.966666667 1.462397998 0.166666667 0.380952381 0.566666667 21 1 0 29 3R:9684581-9684633 6 27.5 4110 FBgn0069242 341.4133333 44.61 67.42 0.080547528 0.61645371 0.407890834 6 5 5.5 0.1 dme-miR-92b-3p 8mer-A1 GTGCAATA 3R 9686731 9686738 + 3R_9686731_9686738_+ 0.62474318 0.621927436 0.623335308 0.001991071 CG18542 FBtr0082084 9686716 9687141 3R + 9686685 9686757 stop_codon CG18542 FlyBase G41532.1 ACCGACGGAGCAGCTTTGCACAAGCAAAACTAGTGCGTTACCAATGGTGCAATATAGATGATAGATAAATGGA 47 9686729 0.978039317 6 46 295 0.981132075 1.716003344 0.094339623 0.127659574 0.226415094 47 1 0 52 3R:9686685-9686757 8 CG18542 FBtr0082084 9686716 9687141 GTGCAATA 8mer-A1 dme-miR-92b-3p 3R + 9686716 9686771 stop_codon CG18542 FlyBase G31333.1 AGTGCGTTACCAATGGTGCAATATAGATGATAGATAAATGGATTCTGTGGAATCTT 16 9686729 0.976444182 2 16 112 1 1.447158031 0.178571429 0.4375 0.678571429 16 0 0 28 3R:9686716-9686771 8 29 4111 FBgn0037731 342.2866667 33.38666667 51.05666667 0.084724305 0.868610224 0.567996344 2 2 2 0.1 dme-miR-190-5p 6mer3-8 ACATAT 3R 9686816 9686821 + 3R_9686816_9686821_+ 0.999999926 0.999998708 0.999999317 8.49E-07 CG18542 FBtr0082084 9686716 9687141 3R + 9686779 9686850 3'utr CG18542 FlyBase G41533.1 ATTTACGTATTTATTCTGTGAACTTTACATTCCAGTCACATATTGCGTCCCGAACTCAAATCACACCGAATT 84 9686808 0.797150919 13 82 510 0.981981982 1.736396502 0 0.238095238 0.423423423 84 1 1 109 3R:9686779-9686850 6 CG18542 FBtr0082084 9686716 9687141 ACATAT 6mer3-8 dme-miR-190-5p 3R + 9686784 9686842 3'utr CG18542 FlyBase G31334.1 CGTATTTATTCTGTGAACTTTACATTCCAGTCACATATTGCGTCCCGAACTCAAATCAC 54 9686808 0.76140962 8 51 343 0.974358974 1.880813592 0 0.333333333 0.538461538 54 2 0 76 3R:9686784-9686842 6 63.5 4112 FBgn0037731 342.2866667 33.38666667 51.05666667 0.185517013 1.901956869 1.243716132 8 8 8 0.1 dme-miR-184-3p 6mer3-8 TCCGTC 3R 9686987 9686992 + 3R_9686987_9686992_+ 0.999547871 0.999611483 0.999579677 4.50E-05 CG18542 FBtr0082084 9686716 9687141 3R + 9686961 9687025 3'utr CG18542 FlyBase G41534.1 CGTTGTCGGCTCGACAAAGAGTAAATTCCGTCTAGGATTAAGAAGAAACTTTATAATCTCCACAC 15 9686986 0.97442006 3 15 90 1 1.278753601 0 0.266666667 0.421052632 15 0 0 19 3R:9686961-9687025 6 CG18542 FBtr0082084 9686716 9687141 TCCGTC 6mer3-8 dme-miR-184-3p 3R + 9686950 9687024 3'utr CG18542 FlyBase G31335.1 CAGACTTTAGCCGTTGTCGGCTCGACAAAGAGTAAATTCCGTCTAGGATTAAGAAGAAACTTTATAATCTCCACA 7 9686986 0.968589718 4 7 43 1 1.041392685 0 0.428571429 0.636363636 7 0 0 11 3R:9686950-9687024 6 9 4113 FBgn0037731 342.2866667 33.38666667 51.05666667 0.02629375 0.26956869 0.176274727 1 1 1 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 9687219 9687224 - 3R_9687219_9687224_- 0.999955219 0.999842383 0.999898801 7.98E-05 Unc-115b FBtr0082097|FBtr0082095 9687058|9687058 9687461|9687461 3R - 9687202 9687235 3'utr Unc-115b FlyBase G49530.1 AAGAAATTAATGTACCTACAGCAGAATCACACAG 15 9687225 0.66700242 2 15 64 1 1.255272505 0.222222222 0.2 0.333333333 15 0 0 18 3R:9687202-9687235 6 Unc-115b FBtr0082095|FBtr0082097 9687058|9687058 9687461|9687461 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 9687207 9687235 3'utr Unc-115b FlyBase G37449.1 AAGAAATTAATGTACCTACAGCAGAATCA 14 9687225 0.854491423 2 14 57 1 1.230448921 0.058823529 0.214285714 0.352941176 14 0 0 17 3R:9687207-9687235 6 14.5 4114 FBgn0260463 1798.356667 71.09 107.6 0.008062917 0.203966803 0.134758364 1 1 1 0.1 dme-miR-190-5p 6mer3-8 ACATAT 3R 9694136 9694141 + 3R_9694136_9694141_+ 0.999999969 0.999999992 0.999999981 0 CG32939 FBtr0082085 9694036 9694461 3R + 9694100 9694204 3'utr CG32939 FlyBase G41538.1 TTTACGTATTTATTCTGTGAACTTTACATTCCAGTCACATATTGCGTCCCGAACTCAAATCACACCGAATTATGCCCTTGATGGCGTTTCTTTATCGATTCGACA 87 9694128 0.979524128 7 78 548 0.887850467 1.977723605 0 0.172413793 0.327102804 87 12 0 95 3R:9694100-9694204 6 CG32939 FBtr0082085 9694036 9694461 ACATAT 6mer3-8 dme-miR-190-5p 3R + 9694114 9694159 3'utr CG32939 FlyBase G31337.1 CTGTGAACTTTACATTCCAGTCACATATTGCGTCCCGAACTCAAAT 64 9694128 0.731084878 6 54 370 0.901098901 1.612783857 0 0.3125 0.516483516 64 8 1 82 3R:9694114-9694159 6 71.5 4115 FBgn0052939 2.536666667 0.266666667 0.413333333 28.18659658 268.125 172.983871 8 8 8 0.1 dme-miR-184-3p 6mer3-8 TCCGTC 3R 9694307 9694312 + 3R_9694307_9694312_+ 0.999540449 0.999559597 0.999550023 1.36E-05 CG32939 FBtr0082085 9694036 9694461 3R + 9694264 9694343 3'utr CG32939 FlyBase G41539.1 TGTCGACAGACTTTAGCCGTTGTCGGCTCGACAAAGAGTAAATTCCGTCTAGGATTAAGAAGAAACTTTATAATCTCCAC 27 9694306 0.97581612 5 27 170 1 1.544068044 0.057142857 0.222222222 0.4 27 0 0 35 3R:9694264-9694343 6 CG32939 FBtr0082085 9694036 9694461 TCCGTC 6mer3-8 dme-miR-184-3p 3R + 9694263 9694344 3'utr CG32939 FlyBase G31338.1 ATGTCGACAGACTTTAGCCGTTGTCGGCTCGACAAAGAGTAAATTCCGTCTAGGATTAAGAAGAAACTTTATAATCTCCACA 12 9694306 0.972582411 4 12 72 1 1.204119983 0 0.333333333 0.5 12 0 0 16 3R:9694263-9694344 6 14 4116 FBgn0052939 2.536666667 0.266666667 0.413333333 5.519053876 52.5 33.87096774 1 1 1 0.1 dme-miR-965-3p 6mer2-7 ACGCTT 3R 9694912 9694917 - 3R_9694912_9694917_- 0.999998686 0.897185341 0.948592013 0.072700052 Unc-115a FBtr0300565|FBtr0346714|FBtr0300564|FBtr0339597|FBtr0344277|FBtr0082092|FBtr0344276|FBtr0344275 9694720|9694720|9694384|9694384|9694720|9694720|9694384|9694384 9695109|9695109|9695109|9695109|9695109|9695109|9695109|9695109 3R - 9694886 9695035 3'utr Unc-115a FlyBase G49548.1 AGAATTCAATTTACCTTAACAGCAGATGGCTATAACTCACGTGGCAGGAGATGAGAATCAATATATAAAATGAAAACGAAACGGGAAACTATGCTAATTTCACAGCCAGTTTTGAAACACGCTTTAAATAGTTGATGCAAGTGAAACCAA 42 9694937 0.97783211 19 41 270 0.980392157 1.698970004 0.117647059 0.214285714 0.352941176 42 1 0 50 3R:9694886-9695035 6 Unc-115a FBtr0344275|FBtr0344276|FBtr0082092|FBtr0344277|FBtr0339597|FBtr0300564|FBtr0346714|FBtr0300565 9694384|9694384|9694720|9694720|9694384|9694384|9694720|9694720 9695109|9695109|9695109|9695109|9695109|9695109|9695109|9695109 ACGCTT 6mer2-7 dme-miR-965-3p 3R - 9694906 9694955 3'utr Unc-115a FlyBase G37463.1 ACGGGAAACTATGCTAATTTCACAGCCAGTTTTGAAACACGCTTTAAATA 15 9694937 0.741051141 6 14 104 0.931034483 1.431363764 0.103448276 0.533333333 0.75862069 15 2 0 27 3R:9694906-9694955 6 7.5 4117 FBgn0051352 385.9966667 13.07333333 19.92 0.01943022 0.573686894 0.376506024 20 20 20 0.1 dme-miR-184-5p 8mer-m1 TGATAAGG 3R 9714167 9714174 + 3R_9714167_9714174_+ 0.614713857 0.614625873 0.614669865 6.22E-05 dmt FBtr0082086 9714126 9714675 3R + 9714155 9714186 3'utr dmt FlyBase G41554.1 TTTTTGTGTCGCTGATAAGGGGAAGTAGTCGT 5 9714169 0.819876762 3 5 31 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 3R:9714155-9714186 8 dmt FBtr0082086 9714126 9714675 TGATAAGG 8mer-m1 dme-miR-184-5p 3R + 9714156 9714201 3'utr dmt FlyBase G31351.1 TTTTGTGTCGCTGATAAGGGGAAGTAGTCGTTTTTAATTTAATGTG 9 9714180 0.796017454 5 9 71 1 1.113943352 0.307692308 0.333333333 0.538461538 9 0 0 13 3R:9714156-9714201 8 6.5 4118 FBgn0016792 1049.153333 39.87 61.16 0.006195472 0.163029847 0.106278613 -2 -13 -7.5 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG 3R 9742021 9742026 + 3R_9742021_9742026_+ 0.999999997 1 0.999999998 0 Pnn FBtr0082126 9741975 9742156 3R + 9741993 9742051 3'utr Pnn FlyBase G41561.1 GGGCTTGAAATATGATCGTGCGGATATCGCTGTGTAGGGCAATTGGGTTTCAATTTATA 11 9742023 0.980493779 6 10 70 0.933333333 1.146128036 0.266666667 0.272727273 0.466666667 11 1 0 14 3R:9741993-9742051 6 Pnn FBtr0082126 9741975 9742156 GCTGTG 6mer2-7 dme-miR-1008-3p 3R + 9741982 9742040 3'utr Pnn FlyBase G31358.1 AGTTTGCACTAGGGCTTGAAATATGATCGTGCGGATATCGCTGTGTAGGGCAATTGGGT 17 9742027 0.963697146 7 17 94 1 1.397940009 0.2 0.352941176 0.56 17 0 0 25 3R:9741982-9742040 6 9.5 4119 FBgn0037737 459.6666667 41.47666667 63.47666667 0.02066715 0.229044443 0.149661293 -2 -6 -4 0.1 dme-miR-970-3p 6mer2-7 CTTATG 3R 9750490 9750495 + 3R_9750490_9750495_+ 0.999895217 0.999999738 0.999947478 7.39E-05 PpD3 FBtr0331693|FBtr0082129|FBtr0082128 9750343|9750343|9750343 9751094|9751094|9751094 3R + 9750398 9750513 3'utr PpD3 FlyBase G41579.1 AATTTACAAACAGCTTGAGAACTTACAATCGCAAGACAGCCCAGCTTACAATGATCAAAGGAGAGGAAAAGGATTCGAAGATGCTCAATAGACTTATGCACACCGCGAGCTGCTTC 128 9750486 0.943557167 12 124 602 0.980519481 1.877946952 0.305194805 0.1796875 0.318181818 128 2 1 151 3R:9750398-9750513 6 PpD3 FBtr0331693|FBtr0082129|FBtr0082128 9750343|9750343|9750343 9751094|9751094|9751094 CTTATG 6mer2-7 dme-miR-970-3p 3R + 9750430 9750564 3'utr PpD3 FlyBase G31373.1 AAGACAGCCCAGCTTACAATGATCAAAGGAGAGGAAAAGGATTCGAAGATGCTCAATAGACTTATGCACACCGCGAGCTGCTTCACTACTTAAGTACGAGTATGGCGAGTCCATAAGGCGTAGGACGAGTGGAGG 82 9750486 0.947402246 15 77 348 0.927927928 1.711807229 0.396396396 0.292682927 0.477477477 82 7 1 103 3R:9750430-9750564 6 65.5 4120 FBgn0005777 1338.646667 67.42 103.0166667 0.048930014 0.971521804 0.635819447 4 4 4 0.1 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3R 9754786 9754792 - 3R_9754786_9754792_- 0.61934077 0.61929386 0.619317315 3.32E-05 Rpt3R FBtr0332172|FBtr0301536 9754733|9754733 9754897|9754897 3R - 9754770 9754813 3'utr Rpt3R FlyBase G49636.1 TCGAAATATATTAGTCAATACTGGTGCTTTAAATAAAAGAAAAT 11 9754785 0.850362932 4 11 87 1 1.079181246 0 0.090909091 0.166666667 11 0 0 12 3R:9754770-9754813 7 Rpt3R FBtr0301536|FBtr0332172 9754733|9754733 9754897|9754897 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3R - 9754771 9754802 3'utr Rpt3R FlyBase G37533.1 TAGTCAATACTGGTGCTTTAAATAAAAGAAAA 11 9754785 0.70010988 4 11 78 1 1.230448921 0.117647059 0.454545455 0.647058824 11 0 0 17 3R:9754771-9754802 7 11 4121 FBgn0037742 43.66666667 3.773333333 5.77 0.251908397 2.915194346 1.906412478 -7 -7 -7 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 3R 9761834 9761840 - 3R_9761834_9761840_- 0.782911824 0.78291165 0.782911737 7.07E-08 Snap24 FBtr0082163 9761303 9762210 3R - 9761810 9761858 3'utr Snap24 FlyBase G49643.1 TACTATTACTACACTCGTGTACAAATGGCAACCAGATGGCGCCGGAAAC 26 9761833 0.948163519 6 23 100 0.918918919 1.230448921 0 0.32 0.540540541 25 2 1 34 3R:9761810-9761858 7 Snap24 FBtr0082163 9761303 9762210 GTACAAA 7mer-A1 dme-miR-305-5p 3R - 9761811 9761852 3'utr Snap24 FlyBase G37539.1 TACTACACTCGTGTACAAATGGCAACCAGATGGCGCCGGAAA 19 9761833 0.931244553 4 17 69 0.793103448 1.361727836 0 0.315789474 0.551724138 19 6 0 23 3R:9761811-9761852 7 20.5 4122 FBgn0266720 491.6633333 32.04666667 48.65666667 0.041695198 0.639692116 0.421319449 -7 -7 -7 0.1 dme-miR-307a-3p 6mer2-7 GTTGTG 3R 9762116 9762121 - 3R_9762116_9762121_- 0.963159328 0.999999972 0.98157965 0.026050309 Snap24 FBtr0082163 9761303 9762210 3R - 9762029 9762177 3'utr Snap24 FlyBase G49645.1 GAACATGTTAGTCAGACACCACCTCCATTTCAATGTTGTTAGGGAAAGAAACCAATGTTGTGGGCACAAACCGTAGCTGGTGGTATTGCGTTATTGATACCATATATTATACACATATACAAGTAGTGGCAACTACTCCTGGCAAACGC 21 9762120 0.97396727 16 21 126 1 1.397940009 0.28 0.095238095 0.24 21 0 0 25 3R:9762029-9762177 6 Snap24 FBtr0082163 9761303 9762210 GTTGTG 6mer2-7 dme-miR-307a-3p 3R - 9762076 9762164 3'utr Snap24 FlyBase G37541.1 AGACACCACCTCCATTTCAATGTTGTTAGGGAAAGAAACCAATGTTGTGGGCACAAACCGTAGCTGGTGGTATTGCGTTATTGATACCA 10 9762096 0.984097482 8 8 56 0.736842105 1.146128036 0 0.4 0.684210526 10 5 0 14 3R:9762076-9762164 6 5.5 4123 FBgn0266720 491.6633333 32.04666667 48.65666667 0.011186517 0.171624714 0.113036925 -1 -25 -13 0.1 dme-miR-1008-3p 7mer-m8 AGCTGTG 3R 9765892 9765898 + 3R_9765892_9765898_+ 0.651329065 0.670038616 0.66068384 0.013229614 CG8478 FBtr0301870|FBtr0301871|FBtr0332171|FBtr0082133 9765837|9765837|9765837|9765837 9766135|9766135|9766135|9766135 3R + 9765843 9765916 3'utr CG8478 FlyBase G41599.1 AGCGATTCGTGTGTAGCCTAGTCTATGTCTAAGTTAAGTGCTGTGGCGTAGCTGTGGTCCGGTAACGGCGCGTT 15 9765884 0.928174759 9 11 112 0.611111111 0.740362689 0.222222222 0.133333333 0.277777778 15 6 1 11 3R:9765843-9765916 7 CG8478 FBtr0332171|FBtr0082133|FBtr0301870|FBtr0301871 9765837|9765837|9765837|9765837 9766135|9766135|9766135|9766135 AGCTGTG 7mer-m8 dme-miR-1008-3p 3R + 9765873 9765912 3'utr CG8478 FlyBase G31382.1 AAGTTAAGTGCTGTGGCGTAGCTGTGGTCCGGTAACGGCG 9 9765885 0.581625969 6 9 60 1 1.146128036 0.285714286 0.444444444 0.642857143 9 0 0 14 3R:9765873-9765912 7 8.5 4124 FBgn0037746 785.14 44.18333333 67.65666667 0.010826095 0.192380234 0.12563433 8 7 7.5 0.1 dme-miR-1006-3p 6mer2-7 GAATTT 3R 9766043 9766048 + 3R_9766043_9766048_+ 1 1 1 0 CG8478 FBtr0301870|FBtr0301871|FBtr0332171|FBtr0082133 9765837|9765837|9765837|9765837 9766135|9766135|9766135|9766135 3R + 9766007 9766075 3'utr CG8478 FlyBase G41600.1 ATTGTACACTTCAGCTGCACGACTGGACTGCTTTGTGAATTTTTTAGGTTTTCGTATGACATTCACACA 25 9766046 0.790926277 10 24 204 0.962962963 1.414973348 0.111111111 0.08 0.148148148 25 1 0 26 3R:9766007-9766075 6 CG8478 FBtr0332171|FBtr0082133|FBtr0301870|FBtr0301871 9765837|9765837|9765837|9765837 9766135|9766135|9766135|9766135 GAATTT 6mer2-7 dme-miR-1006-3p 3R + 9765987 9766062 3'utr CG8478 FlyBase G31383.1 GGTTACTCGAATGCTTATTAATTGTACACTTCAGCTGCACGACTGGACTGCTTTGTGAATTTTTTAGGTTTTCGTA 16 9766038 0.98730842 8 15 143 1 1.380211242 0.208333333 0.375 0.583333333 16 0 0 24 3R:9765987-9766062 6 11 4125 FBgn0037746 785.14 44.18333333 67.65666667 0.01401024 0.248962656 0.162585604 -3 5 1 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 9766376 9766382 - 3R_9766376_9766382_- 0.65899941 0.658999411 0.658999411 0 MED6 FBtr0301873|FBtr0339719|FBtr0082161|FBtr0082162|FBtr0301872 9766029|9766029|9766029|9766029|9766029 9766440|9766440|9766440|9766440|9766440 3R - 9766349 9766399 3'utr MED6 FlyBase G49653.1 ATTAGTCCGAGTCCTTTGGCAGCTGCATAAAAGGCGCTGAATGCTGCCTGC 41 9766383 0.974589705 4 40 246 0.97826087 1.653212514 0.239130435 0.12195122 0.217391304 41 1 0 45 3R:9766349-9766399 7 MED6 FBtr0339719|FBtr0082161|FBtr0082162|FBtr0301872|FBtr0301873 9766029|9766029|9766029|9766029|9766029 9766440|9766440|9766440|9766440|9766440 GGCAGCT 7mer-m8 dme-miR-980-3p 3R - 9766345 9766399 3'utr MED6 FlyBase G37544.1 ATTAGTCCGAGTCCTTTGGCAGCTGCATAAAAGGCGCTGAATGCTGCCTGCATTT 37 9766384 0.972933767 5 36 218 0.981132075 1.716003344 0.188679245 0.324324324 0.528301887 37 1 0 52 3R:9766345-9766399 7 38 4126 FBgn0024330 320.2133333 23.55 36.04333333 0.118670886 1.61358811 1.054286507 1 2 1.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3R 9769498 9769504 + 3R_9769498_9769504_+ 0.823349537 0.823349562 0.82334955 7.07E-08 CG8481 FBtr0100583|FBtr0082134 9769425|9769425 9770027|9770027 3R + 9769431 9769619 3'utr CG8481 FlyBase G41603.1 CAACGCCAGTAGTAGTGGGCTTGGCTAAATTGGGCCATACCCAGCCCGATCAGAGAGTGGCAGTGAACTAGTCAAATTGGCAAATGCTTGAAATTCTTTACGGGTTTTACCTGCCAGCAGCTGCTTCGAGCCATAACCTGTGGATGCCAGGCAGTCTGCCAAGTGCATGTGTGATTGCCTCGTTGCTCT 113 9769489 0.964284717 22 102 534 0.929078014 1.8162413 0.120567376 0.203539823 0.361702128 113 9 1 131 3R:9769431-9769619 7 CG8481 FBtr0100583|FBtr0082134 9769425|9769425 9770027|9770027 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 9769429 9769559 3'utr CG8481 FlyBase G31387.1 GTCAACGCCAGTAGTAGTGGGCTTGGCTAAATTGGGCCATACCCAGCCCGATCAGAGAGTGGCAGTGAACTAGTCAAATTGGCAAATGCTTGAAATTCTTTACGGGTTTTACCTGCCAGCAGCTGCTTCGA 113 9769490 0.959591984 13 107 496 0.95212766 2.252853031 0.138297872 0.451327434 0.670212766 113 9 0 179 3R:9769429-9769559 7 93 4127 FBgn0037747 197.4366667 16.77 25.65666667 0.471037126 5.545617174 3.624788879 9 8 8.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 9779385 9779391 + 3R_9779385_9779391_+ 0.753549162 0.747042886 0.750296024 0.004600649 RpS29 FBtr0334681|FBtr0334681|FBtr0334681 9778784|9778784|9778784 9779528|9779528|9779528 3R + 9779349 9779428 3'utr RpS29 FlyBase G41613.1 CACCAGTTGCATAAAGGCTTTTGATGCGGACTTTGATGTGATATGCAAAACTGGCAGGCCACTGAACCCATTTTTTATAT 31 9779369 0.979946844 11 31 217 1 1.544068044 0.257142857 0.129032258 0.228571429 31 0 0 35 3R:9779349-9779428 7 RpS29 FBtr0334681|FBtr0334681|FBtr0334681 9778784|9778784|9778784 9779528|9779528|9779528 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 9779353 9779398 3'utr RpS29 FlyBase G31401.1 AGTTGCATAAAGGCTTTTGATGCGGACTTTGATGTGATATGCAAAA 21 9779382 0.937852622 9 20 150 0.911764706 1.491361694 0.088235294 0.333333333 0.588235294 21 3 0 31 3R:9779353-9779398 7 17 4128 FBgn0261599 23525.90667 6343.63 9678.496667 0.000722608 0.002679854 0.001756471 16 3 9.5 0.1 dme-miR-282-5p 6mer3-8 AGAGGC 3R 9783827 9783832 - 3R_9783827_9783832_- 0.73117345 0.997523831 0.86434864 0.188338174 MtnA FBtr0334686 9783405 9783858 3R - 9783774 9783861 stop_codon MtnA FlyBase G49663.1 TGAGCTTTCCCCCAAAAAAGATCTGGAGTAGAGGCGCTGCATCTTGTCTCTCTACACACCCTGCAATAAATGTCCAATTAAAGTAATT 39 9783855 0.723290385 11 35 225 0.875 1.62324929 0.208333333 0.179487179 0.333333333 39 6 0 42 3R:9783774-9783861 6 MtnA FBtr0334686 9783405 9783858 AGAGGC 6mer3-8 dme-miR-282-5p 3R - 9783776 9783885 stop_codon MtnA FlyBase G37551.1 AAATCCGCCTGCGGCTGCTCCGAGTGAGCTTTCCCCCAAAAAAGATCTGGAGTAGAGGCGCTGCATCTTGTCTCTCTACACACCCTGCAATAAATGTCCAATTAAAGTAA 38 9783834 0.919425703 15 37 194 0.979166667 1.672097858 0.1875 0.263157895 0.416666667 38 1 0 47 3R:9783776-9783885 6 21 4129 FBgn0002868 684.99 284.0066667 426.33 0.030657382 0.073941926 0.049257617 23 2 12.5 0.1 dme-miR-12-5p 7mer-m8 AATACTC 3R 9786958 9786964 + 3R_9786958_9786964_+ 0.674505615 0.499241561 0.586873588 0.123930363 CG8500 FBtr0082139 9786856 9789323 3R + 9786921 9786982 3'utr CG8500 FlyBase G41618.1 GTCGAGCTGAAGTGAACGGAGACGACGGTGACAGACAAATACTCGCCTTGGGGCAGCACCCT 17 9786960 0.910717331 3 17 58 1 1.255272505 0.166666667 0.058823529 0.111111111 17 0 0 18 3R:9786921-9786982 7 CG8500 FBtr0082139 9786856 9789323 AATACTC 7mer-m8 dme-miR-12-5p 3R + 9786942 9786977 3'utr CG8500 FlyBase G31408.1 ACGACGGTGACAGACAAATACTCGCCTTGGGGCAGC 6 9786968 0.612596804 3 6 21 1 0.954242509 0 0.166666667 0.444444444 6 0 0 9 3R:9786942-9786977 7 10.5 4130 FBgn0037754 1099.76 38.82 59.79333333 0.009547538 0.270479134 0.175604861 -2 -10 -6 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3R 9787236 9787242 + 3R_9787236_9787242_+ 0.661615029 0.661614901 0.661614965 7.07E-08 CG8500 FBtr0082139 9786856 9789323 3R + 9787207 9787272 3'utr CG8500 FlyBase G41620.1 ATATATTCTATTCGAGCCGATCAGATCTTTCTAGTCGCACAGAGACACGATACCACGTACTGCATA 187 9787235 0.756873768 10 185 1090 0.990950226 2.340444115 0.366515837 0.14973262 0.280542986 187 2 0 219 3R:9787207-9787272 7 CG8500 FBtr0082139 9786856 9789323 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 9787202 9787269 3'utr CG8500 FlyBase G31410.1 AGGTTATATATTCTATTCGAGCCGATCAGATCTTTCTAGTCGCACAGAGACACGATACCACGTACTGC 126 9787235 0.677542435 6 118 728 0.91959799 1.961421094 0.361809045 0.388888889 0.613065327 126 15 1 183 3R:9787202-9787269 7 147 4131 FBgn0037754 1099.76 38.82 59.79333333 0.133665527 3.786707883 2.458468057 1 1 1 0.1 dme-miR-14-3p 6mer3-8 AAGACT 3R 9787549 9787554 + 3R_9787549_9787554_+ 0.99968082 0.999974574 0.999827697 0.000207748 CG8500 FBtr0082139 9786856 9789323 3R + 9787527 9787589 3'utr CG8500 FlyBase G41622.1 ATTTACATGGATCCATCAACGTAAGACTTCTCCGTGATCGCCACATAGAGAGCATCGCGAGGC 7 9787548 0.988960898 3 6 50 0.857142857 0.77815125 0.428571429 0 0 7 1 0 6 3R:9787527-9787589 6 CG8500 FBtr0082139 9786856 9789323 AAGACT 6mer3-8 dme-miR-14-3p 3R + 9787441 9787577 3'utr CG8500 FlyBase G31413.1 AAGCTATACACTAATATCTCTAATGAAAGCCAAAGTACCTACTTAAAGACATAGAATCTGTATCTACTACGATATGATAACAAAATATTTACATGGATCCATCAACGTAAGACTTCTCCGTGATCGCCACATAGAGA 22 9787548 0.970762601 14 20 123 0.970588235 1.51851394 0.147058824 0.363636364 0.588235294 22 1 0 33 3R:9787441-9787577 6 7 4132 FBgn0037754 1099.76 38.82 59.79333333 0.006365025 0.180319423 0.117069907 1 1 1 0.1 dme-miR-1012-3p 6mer2-7 TGACTA 3R 9787642 9787647 + 3R_9787642_9787647_+ 0.926667131 0.999999988 0.96333356 0.051854191 CG8500 FBtr0082139 9786856 9789323 3R + 9787622 9787663 3'utr CG8500 FlyBase G41623.1 AAATGGCCGATGCCTCCCCCTGACTATCATTGCTGTTTAACT 8 9787652 0.876959922 4 8 68 1 1.041392685 0 0.25 0.454545455 8 0 0 11 3R:9787622-9787663 6 CG8500 FBtr0082139 9786856 9789323 TGACTA 6mer2-7 dme-miR-1012-3p 3R + 9787626 9787662 3'utr CG8500 FlyBase G31414.1 GGCCGATGCCTCCCCCTGACTATCATTGCTGTTTAAC 6 9787650 0.65451545 5 6 48 1 0.77815125 0 0 0 6 0 0 6 3R:9787626-9787662 6 7 4133 FBgn0037754 1099.76 38.82 59.79333333 0.006365025 0.180319423 0.117069907 -10 -8 -9 0.1 dme-miR-980-3p 6mer2-7 GCAGCT 3R 9787871 9787876 + 3R_9787871_9787876_+ 1 0.999999851 0.999999926 7.07E-08 CG8500 FBtr0082139 9786856 9789323 3R + 9787827 9787905 3'utr CG8500 FlyBase G41624.1 AATATGTATGTACAATTTTACACTTATTTGCTGAACTTTATTGAGCAGCTTGAACTTTCTCAGTAGTAGCCAGATCGAT 15 9787867 0.98823545 8 14 120 0.882352941 1.176091259 0.235294118 0.133333333 0.235294118 15 2 0 15 3R:9787827-9787905 6 CG8500 FBtr0082139 9786856 9789323 GCAGCT 6mer2-7 dme-miR-980-3p 3R + 9787852 9787882 3'utr CG8500 FlyBase G31415.1 ATTTGCTGAACTTTATTGAGCAGCTTGAACT 8 9787867 0.770603678 4 8 60 1 1.079181246 0 0.375 0.583333333 8 0 0 12 3R:9787852-9787882 6 9.5 4134 FBgn0037754 1099.76 38.82 59.79333333 0.008638248 0.244719217 0.158880589 4 4 4 0.1 dme-miR-283-5p 8mer-A1 TGATATTA 3R 9788236 9788243 + 3R_9788236_9788243_+ 0.592192292 0.592192282 0.592192287 0 CG8500 FBtr0082139 9786856 9789323 3R + 9788207 9788337 3'utr CG8500 FlyBase G41626.1 CAAATTGTTTCGCATAGTTTGCTGTTGTTTGATATTAAGAGGATAAGTTTTTTTAAATTTTACCAATCGGACTAAGTGAATGATATGCTTTAAACGCTGCTATACCAATTAGCCAAATAGAGGGGCATGTA 19 9788234 0.991101359 15 19 193 1 1.322219295 0.380952381 0.105263158 0.19047619 19 0 0 21 3R:9788207-9788337 8 CG8500 FBtr0082139 9786856 9789323 TGATATTA 8mer-A1 dme-miR-283-5p 3R + 9788216 9788248 3'utr CG8500 FlyBase G31416.1 TCGCATAGTTTGCTGTTGTTTGATATTAAGAGG 7 9788234 0.637901778 5 7 69 1 0.954242509 0.555555556 0.285714286 0.444444444 7 0 0 9 3R:9788216-9788248 8 9 4135 FBgn0037754 1099.76 38.82 59.79333333 0.008183604 0.231839258 0.150518452 2 2 2 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 9788637 9788642 + 3R_9788637_9788642_+ 1 0.999996963 0.999998481 2.12E-06 CG8500 FBtr0082139 9786856 9789323 3R + 9788609 9788675 3'utr CG8500 FlyBase G41627.1 CGACGATATGCCAGCCTTAGTTGAGAATTCTAGTTAGCCTGCCTGTGCTTTGGGTTCTGCTTGGTGT 11 9788642 0.98925045 7 10 91 1 1.041392685 0.363636364 0 0 11 0 0 11 3R:9788609-9788675 6 CG8500 FBtr0082139 9786856 9789323 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 9788603 9788669 3'utr CG8500 FlyBase G31419.1 CGATTACGACGATATGCCAGCCTTAGTTGAGAATTCTAGTTAGCCTGCCTGTGCTTTGGGTTCTGCT 10 9788658 0.985720566 7 10 82 1 1.230448921 0.352941176 0.5 0.705882353 10 0 0 17 3R:9788603-9788669 6 6.5 4136 FBgn0037754 1099.76 38.82 59.79333333 0.00591038 0.167439464 0.108707771 -5 -21 -13 0.1 dme-miR-1003-3p 6mer2-7 TGTGAG 3R 9789053 9789058 - 3R_9789053_9789058_- 0.999998959 0.9999838 0.999991379 1.07E-05 CG12945 FBtr0113214|FBtr0334685 9788850|9788850 9789429|9789429 3R - 9788984 9789150 3'utr CG12945 FlyBase G49668.1 AATTTTTATATGTAACTTGTTGATCATTTATATTTACAACTTGGCGCTCAGGCGATTATTAATAATAATATTATTAGCAGTGGGCGCTCATTTGTGAGTTGCGTATTAATTGAATGTAAGCGATAATTAAATATTCGGTTTTCGAATCTTGTAAAATCTAATTTAAT 26 9789052 0.987303378 13 26 236 1 1.447158031 0.392857143 0.076923077 0.142857143 26 0 0 28 3R:9788984-9789150 6 CG12945 FBtr0334685|FBtr0113214 9788850|9788850 9789429|9789429 TGTGAG 6mer2-7 dme-miR-1003-3p 3R - 9789023 9789076 3'utr CG12945 FlyBase G37554.1 TAGCAGTGGGCGCTCATTTGTGAGTTGCGTATTAATTGAATGTAAGCGATAATT 10 9789052 0.912623744 5 10 78 1 1.146128036 0.5 0.4 0.571428571 10 0 0 14 3R:9789023-9789076 6 12 4137 FBgn0037755 425.2633333 24.99 38.05666667 0.02821781 0.480192077 0.315319261 -6 -6 -6 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 9789276 9789283 - 3R_9789276_9789283_- 0.500120131 0.50011767 0.500118901 1.70E-06 CG12945 FBtr0113214|FBtr0334685 9788850|9788850 9789429|9789429 3R - 9789239 9789309 3'utr CG12945 FlyBase G49669.1 AAATTTTTATTTAAATTATTTTGCATGTACTTAATCTCATTTGCGCGATAAGTGTTATTAAGATAAATCTT 133 9789284 0.743506749 15 127 1299 0.968152866 2.181843588 0.038216561 0.135338346 0.267515924 133 5 0 152 3R:9789239-9789309 8 CG12945 FBtr0334685|FBtr0113214 9788850|9788850 9789429|9789429 GTACTTAA 8mer-A1 dme-miR-252-5p 3R - 9789241 9789307 3'utr CG12945 FlyBase G37556.2 ATTTTTATTTAAATTATTTTGCATGTACTTAATCTCATTTGCGCGATAAGTGTTATTAAGATAAATC 85 9789284 0.738066613 12 82 763 0.9609375 1.788875116 0.09375 0.364705882 0.578125 85 4 1 123 3R:9789241-9789307 8 100 4138 FBgn0037755 425.2633333 24.99 38.05666667 0.235148418 4.00160064 2.627660506 1 1 1 0.1 dme-miR-305-5p 7mer-A1 GTACAAA 3R 9797271 9797277 + 3R_9797271_9797277_+ 0.782328068 0.782438801 0.782383434 7.83E-05 CG8516 FBtr0082141 9797002 9797754 3R + 9797239 9797339 3'utr CG8516 FlyBase G41640.1 TAGAATATAGCATAGCTTTAGGTTGAATTTGTGTACAAACTATTTGTATGAACGGCTCGACAATTGCTTCCGGGCGAGGGTGGGTAATCGCTCCAAGTATC 72 9797267 0.783196837 10 69 642 0.989010989 1.954242509 0.197802198 0.236111111 0.395604396 72 1 0 90 3R:9797239-9797339 7 CG8516 FBtr0082141 9797002 9797754 GTACAAA 7mer-A1 dme-miR-305-5p 3R + 9797231 9797326 3'utr CG8516 FlyBase G31430.1 TTGCCCTTTAGAATATAGCATAGCTTTAGGTTGAATTTGTGTACAAACTATTTGTATGAACGGCTCGACAATTGCTTCCGGGCGAGGGTGGGTAAT 45 9797267 0.794954015 9 40 361 0.942028986 1.812913357 0.202898551 0.4 0.608695652 45 4 0 65 3R:9797231-9797326 7 42 4139 FBgn0037757 595.6666667 20.49666667 31.43 0.070509233 2.049113677 1.336302895 4 4 4 0.1 dme-miR-318-3p 6mer2-7 CCAGTG 3R 9797369 9797374 + 3R_9797369_9797374_+ 0.99999666 0.999999925 0.999998292 2.26E-06 CG8516 FBtr0082141 9797002 9797754 3R + 9797350 9797407 3'utr CG8516 FlyBase G41641.1 TTATTATTCTATCTCAGTACCAGTGCGTCCTATTTTAGGTAAATTAAAGGCAGGGGTC 16 9797380 0.980407145 7 15 122 1 1.278753601 0.157894737 0.125 0.263157895 16 0 0 19 3R:9797350-9797407 6 CG8516 FBtr0082141 9797002 9797754 CCAGTG 6mer2-7 dme-miR-318-3p 3R + 9797359 9797391 3'utr CG8516 FlyBase G31431.1 TATCTCAGTACCAGTGCGTCCTATTTTAGGTAA 6 9797381 0.622931107 3 4 51 0.461538462 0.77815125 0 0.5 0.769230769 6 7 0 6 3R:9797359-9797391 6 9.5 4140 FBgn0037757 595.6666667 20.49666667 31.43 0.015948517 0.463489998 0.302258988 -11 -12 -11.5 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 3R 9797915 9797921 - 3R_9797915_9797921_- 0.521222891 0.498362886 0.509792888 0.016164461 CG9467 FBtr0082156 9797767 9798459 3R - 9797867 9797963 3'utr CG9467 FlyBase G49680.1 AAACAGCCAATCAGTTGATTGTCAACCTTGAAGATGATTACTTGTGATTAAAATCGATAGAGCGACTGCTTCAAATTCGAATCTGTCCTGTTGCATG 62 9797923 0.762414697 20 60 494 0.961038961 1.568201724 0.051948052 0.209677419 0.363636364 62 2 1 74 3R:9797867-9797963 7 CG9467 FBtr0082156 9797767 9798459 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 9797909 9797962 3'utr CG9467 FlyBase G37561.2 AACAGCCAATCAGTTGATTGTCAACCTTGAAGATGATTACTTGTGATTAAAATC 18 9797926 0.656996925 9 17 130 0.925925926 1.397940009 0.037037037 0.277777778 0.518518519 18 2 0 25 3R:9797909-9797962 7 25.5 4141 FBgn0037758 388.19 14.69 22.38 0.065689482 1.735874745 1.139410188 2 5 3.5 0.1 dme-miR-14-3p 6mer3-8 AAGACT 3R 9798079 9798084 - 3R_9798079_9798084_- 1 0.999999986 0.999999993 0 CG9467 FBtr0082156 9797767 9798459 3R - 9797968 9798105 3'utr CG9467 FlyBase G49681.1 AAACCATGTAAACCAGAGTATAAGACTTCTGCAACCGATCATCTATAATTAGCACAACTCTCCTAAAGGGTGCTCCATCAGGACAGATACGAAATCGTTCGGCTTGGATAAGATTGGTTGCCTTAAGCAAAGAAAGTT 120 9798076 0.962533558 12 111 621 0.921428571 1.633468456 0.042857143 0.125 0.25 120 9 2 129 3R:9797968-9798105 6 CG9467 FBtr0082156 9797767 9798459 AAGACT 6mer3-8 dme-miR-14-3p 3R - 9798059 9798104 3'utr CG9467 FlyBase G37563.1 AACCATGTAAACCAGAGTATAAGACTTCTGCAACCGATCATCTATA 70 9798076 0.72754091 5 61 349 0.857142857 1.62324929 0.091836735 0.285714286 0.489795918 70 13 1 84 3R:9798059-9798104 6 89 4142 FBgn0037758 388.19 14.69 22.38 0.229269172 6.058543227 3.976764969 -8 -8 -8 0.1 dme-miR-305-3p 6mer3-8 ATGTGC 3R 9798239 9798244 - 3R_9798239_9798244_- 0.99998542 0.999991565 0.999988493 4.38E-06 CG9467 FBtr0082156 9797767 9798459 3R - 9798202 9798300 3'utr CG9467 FlyBase G49683.1 ACTGGGCCGTGATGAACTGCCAGCAGGCATTTACCCAATCAATTAATCTCCATTATATGTGCTCGATGTGTTTGCAAATGCAATGTGTATCCCGTAAAC 25 9798243 0.980188227 11 25 207 1 1.447158031 0.107142857 0.12 0.214285714 25 0 0 28 3R:9798202-9798300 6 CG9467 FBtr0082156 9797767 9798459 ATGTGC 6mer3-8 dme-miR-305-3p 3R - 9798151 9798301 3'utr CG9467 FlyBase G37564.1 CACTGGGCCGTGATGAACTGCCAGCAGGCATTTACCCAATCAATTAATCTCCATTATATGTGCTCGATGTGTTTGCAAATGCAATGTGTATCCCGTAAACCCATTTTTTGTGCTCCTCCAAACTTGGATCGTACAGTTAGTAATTTAAAAA 32 9798243 0.990393691 14 23 224 0.673469388 1.041392685 0.040816327 0.375 0.591836735 32 14 2 33 3R:9798151-9798301 6 14.5 4143 FBgn0037758 388.19 14.69 22.38 0.037352843 0.987066031 0.647899911 -1 -1 -1 0.1 dme-miR-980-3p 6mer3-8 GGCAGC 3R 9804268 9804273 - 3R_9804268_9804273_- 0.960968565 0.935812064 0.948390315 0.017788332 FBXO11 FBtr0334684 9803484 9804888 3R - 9804260 9804338 3'utr FBXO11 FlyBase G49702.1 CCCCCTCCTGACTAACAACAATTCGAAGAAAGCAATTCTAAGTATTAACAACAAACTAGATTAGCGGCAGCCAATGCTT 15 9804302 0.966433388 7 13 69 0.875 0.84509804 0.0625 0.066666667 0.125 15 1 1 14 3R:9804260-9804338 6 FBXO11 FBtr0334684 9803484 9804888 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 9804254 9804315 3'utr FBXO11 FlyBase G37573.1 CGAAGAAAGCAATTCTAAGTATTAACAACAAACTAGATTAGCGGCAGCCAATGCTTCAGCAA 7 9804277 0.978236431 5 5 27 0.833333333 1 0 0.571428571 0.75 7 2 0 10 3R:9804254-9804315 6 6.5 4144 FBgn0037760 1562.243333 36.55333333 56.13333333 0.004160683 0.17782236 0.115795724 29 4 16.5 0.1 dme-miR-33-5p 8mer-A1 CAATGCAA 3R 9804607 9804614 - 3R_9804607_9804614_- 0.634481309 0.634484907 0.634483108 2.55E-06 FBXO11 FBtr0334684 9803484 9804888 3R - 9804579 9804638 3'utr FBXO11 FlyBase G49705.1 TAACTGAGTATGTTACGGATAAATCAATGCAAAAACCACTGAAACTTTTCCCATTTATGT 80 9804615 0.791856305 4 78 257 0.980392157 2 0.274509804 0.2375 0.401960784 80 2 0 100 3R:9804579-9804638 8 FBXO11 FBtr0334684 9803484 9804888 CAATGCAA 8mer-A1 dme-miR-33-5p 3R - 9804601 9804633 3'utr FBXO11 FlyBase G37575.1 GAGTATGTTACGGATAAATCAATGCAAAAACCA 57 9804615 0.769030334 2 53 154 0.964285714 1.908485019 0.321428571 0.385964912 0.583333333 57 3 0 81 3R:9804601-9804633 8 66 4145 FBgn0037760 1562.243333 36.55333333 56.13333333 0.04224694 1.805580886 1.175771971 1 1 1 0.1 dme-miR-980-3p 8mer-A1 GGCAGCTA 3R 9804869 9804876 - 3R_9804869_9804876_- 0.668668834 0.668734334 0.668701584 4.63E-05 FBXO11 FBtr0334684 9803484 9804888 3R - 9804788 9804910 stop_codon FBXO11 FlyBase G49707.1 ACACACACTGATGGTCAACTAGAGAACCCCCAACGGCAGCTAATCCACTATAGATATATCTTAAGTCGTTAAGGCCAATCTCTCAAATCTCTCGCACATCTCACGCGTTGCTGTAAATATTCA 43 9804868 0.768361185 17 38 185 0.901960784 1.361727836 0.215686275 0.162790698 0.294117647 43 4 1 46 3R:9804788-9804910 8 FBXO11 FBtr0334684 9803484 9804888 GGCAGCTA 8mer-A1 dme-miR-980-3p 3R - 9804788 9805011 stop_codon FBXO11 FlyBase G37577.1 TGCGACTGCGGTGCTGGCACCCTGTCCAATCAGTGTCAACTGCAGGGCGAACCCACTCAGGACACGGACACACTCTACGACTCGGCAGCCCCCATGGAATCACACACACTGATGGTCAACTAGAGAACCCCCAACGGCAGCTAATCCACTATAGATATATCTTAAGTCGTTAAGGCCAATCTCTCAAATCTCTCGCACATCTCACGCGTTGCTGTAAATATTCA 37 9804867 0.957714453 19 30 146 0.771929825 1.643452676 0.298245614 0.459459459 0.649122807 37 13 0 44 3R:9804788-9805011 8 18 4146 FBgn0037760 1562.243333 36.55333333 56.13333333 0.011521893 0.492431151 0.320665083 -8 -9 -8.5 0.1 dme-miR-283-5p 7mer-m1 GATATTT 3R 9983484 9983490 - 3R_9983484_9983490_- 0.759376989 0.585072463 0.672224726 0.123251894 Art4 FBtr0082150|FBtr0333687 9983184|9982814 9983912|9983912 3R - 9983395 9983507 3'utr Art4 FlyBase G49732.1 ATGTGAATTGTAATACCGATATTTAGCCCGCACGGGACTGCGCTTCAGGAAGTTTATTAGTTAATATGCCGATTGCCAATTGCAGATTTTGCCGTAAGCTTTGAACAAACCAA 14 9983497 0.981348367 10 12 88 0.894736842 1.230448921 0.210526316 0.285714286 0.473684211 14 2 0 17 3R:9983395-9983507 7 Art4 FBtr0082150|FBtr0333687 9983184|9982814 9983912|9983912 GATATTT 7mer-m1 dme-miR-283-5p 3R - 9983454 9983513 3'utr Art4 FlyBase G37592.1 TAACGTATGTGAATTGTAATACCGATATTTAGCCCGCACGGGACTGCGCTTCAGGAAGTT 9 9983498 0.975851168 7 9 53 1 1.079181246 0.416666667 0.222222222 0.416666667 9 0 0 12 3R:9983454-9983513 7 5 4147 FBgn0037770 662.43 26.1 40.01666667 0.007547967 0.191570881 0.124947938 7 8 7.5 0.1 dme-miR-980-5p 6mer3-8 GAAAAA 3R 9988521 9988526 + 3R_9988521_9988526_+ 0.950148425 0.983192741 0.966670583 0.023365849 Glut4EF FBtr0112576|FBtr0333685|FBtr0333686|FBtr0112577|FBtr0305157 9987787|9988414|9987787|9987787|9987787 9988876|9988876|9995364|9988876|9995364 3R + 9988405 9988673 stop_codon Glut4EF FlyBase G41656.1 TGCAGGGCTAAGTCCACCTGAGCCGCCACCGAGTGCACCGATAGCTTGCTGACTCCTGGATGGCTGTCGGTGGCAGCTGTTGCCACCCCGAGGACACAAAACGCAAAAATGCAAATGAAAAATGGTCTCTTCTTATTTACTCTGCATTGAATTGTGCACCTTAAACACGTAACGGTATCTCTTTTGTTGTTGTGCAGGTGTTTGCCAACTGCCGTGCAAATGTTGCTGACATTTGCGCCCGGGCAACATTTGCAATCTACAATAATCTA 598 9988527 0.930180032 41 581 4567 0.974767596 2.02059802 0.227091633 0.198996656 0.363877822 598 13 6 734 3R:9988405-9988673 6 Glut4EF FBtr0112577|FBtr0333686|FBtr0333685|FBtr0112576|FBtr0305157 9987787|9987787|9988414|9987787|9987787 9988876|9995364|9988876|9988876|9995364 GAAAAA 6mer3-8 dme-miR-980-5p 3R + 9988446 9988553 5'utr Glut4EF FlyBase G31441.1 TAGCTTGCTGACTCCTGGATGGCTGTCGGTGGCAGCTGTTGCCACCCCGAGGACACAAAACGCAAAAATGCAAATGAAAAATGGTCTCTTCTTATTTACTCTGCATTG 257 9988527 0.889713095 15 246 1863 0.966480447 2.061954844 0.078212291 0.319066148 0.511173184 257 10 2 346 3R:9988446-9988553 6 272 4148 FBgn0267336 810.6266667 20.61 31.68 0.335542872 13.19747695 8.585858586 -6 -6 -6 0.1 dme-miR-970-3p 7mer-m8 TCTTATG 3R 9988768 9988774 + 3R_9988768_9988774_+ 0.591112757 0.655708313 0.623410535 0.045675916 Glut4EF FBtr0112576|FBtr0333685|FBtr0333686|FBtr0112577|FBtr0305157 9987787|9988414|9987787|9987787|9987787 9988876|9988876|9995364|9988876|9995364 3R + 9988708 9988779 5'utr Glut4EF FlyBase G41657.1 TTGCAGTGCGTAAATATACATATACATATACATATTTATTTCTAAAATGACTTTGTTAATTCTTATGTTAAA 48 9988761 0.991661106 8 48 517 1 1.763427994 0.017241379 0.1875 0.327586207 48 0 0 58 3R:9988708-9988779 7 Glut4EF FBtr0112577|FBtr0333686|FBtr0333685|FBtr0112576|FBtr0305157 9987787|9987787|9988414|9987787|9987787 9988876|9995364|9988876|9988876|9995364 TCTTATG 7mer-m8 dme-miR-970-3p 3R + 9988738 9988807 5'utr Glut4EF FlyBase G31442.1 CATATTTATTTCTAAAATGACTTTGTTAATTCTTATGTTAAAAAGCTGAAAAGCAGTTGGCAACTTTTTA 34 9988761 0.847744276 7 33 380 0.976744186 1.322219295 0.093023256 0.264705882 0.418604651 34 0 1 42 3R:9988738-9988807 7 8 4149 FBgn0267336 810.6266667 20.61 31.68 0.009868908 0.388161087 0.252525253 7 7 7 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 3R 9989179 9989184 + 3R_9989179_9989184_+ 0.993743939 0.997182079 0.995463009 0.002431175 Glut4EF FBtr0333686|FBtr0305157 9987787|9987787 9995364|9995364 3R + 9989158 9989185 3'utr Glut4EF FlyBase G41660.1 AATTCATCACGAAGTGGTTTCTGTGTTG 56 9989172 0.866833965 7 53 450 0.941176471 1.329058719 0.882352941 0.214285714 0.352941176 56 2 2 64 3R:9989158-9989185 6 Glut4EF FBtr0333686|FBtr0305157 9987787|9987787 9995364|9995364 TGTGTT 6mer3-8 dme-miR-317-3p 3R + 9989163 9989185 3'utr Glut4EF FlyBase G31444.1 ATCACGAAGTGGTTTCTGTGTTG 45 9989172 0.853386907 7 41 364 0.921875 1.770852012 0.953125 0.333333333 0.53125 45 5 0 59 3R:9989163-9989185 6 50.5 4150 FBgn0267336 810.6266667 20.61 31.68 0.062297482 2.450266861 1.594065657 7 7 7 0.1 dme-miR-304-5p 7mer-m8 TGAGATT 3R 9990038 9990044 + 3R_9990038_9990044_+ 0.620141196 0.620135985 0.62013859 3.68E-06 Glut4EF FBtr0333686|FBtr0305157 9987787|9987787 9995364|9995364 3R + 9990016 9990060 3'utr Glut4EF FlyBase G41663.1 CCATCTAGGGATAGCTACGCATTGAGATTGAAGAGCAGGAGAATT 52 9990037 0.768017113 5 52 248 1 1.806179974 0.34375 0.211538462 0.359375 52 0 0 64 3R:9990016-9990060 7 Glut4EF FBtr0333686|FBtr0305157 9987787|9987787 9995364|9995364 TGAGATT 7mer-m8 dme-miR-304-5p 3R + 9990017 9990126 3'utr Glut4EF FlyBase G31445.1 CATCTAGGGATAGCTACGCATTGAGATTGAAGAGCAGGAGAATTTACGAATGAAGAAATGAAAATACACAAGGAATTCTTAACCAAATTGGAAGTACAAACTAAAGTCTA 56 9990037 0.958686242 8 54 262 0.954545455 1.924279286 0.397727273 0.392857143 0.613636364 56 4 0 84 3R:9990017-9990126 7 42 4151 FBgn0267336 810.6266667 20.61 31.68 0.051811767 2.037845706 1.325757576 1 1 1 0.1 dme-miR-1007-3p 8mer-A1 TGAGCTTA 3R 9990258 9990265 + 3R_9990258_9990265_+ 0.625363085 0.62535971 0.625361397 2.40E-06 Glut4EF FBtr0333686|FBtr0305157 9987787|9987787 9995364|9995364 3R + 9990238 9990285 3'utr Glut4EF FlyBase G41665.1 AGGAGGAGCGGAGGGAAAATTGAGCTTAGGCGGCAGCAGCTTTAAAAA 11 9990257 0.918249382 4 11 37 1 1.041392685 0.272727273 0 0 11 0 0 11 3R:9990238-9990285 8 Glut4EF FBtr0333686|FBtr0305157 9987787|9987787 9995364|9995364 TGAGCTTA 8mer-A1 dme-miR-1007-3p 3R + 9990241 9990282 3'utr Glut4EF FlyBase G31446.1 AGGAGCGGAGGGAAAATTGAGCTTAGGCGGCAGCAGCTTTAA 7 9990257 0.922158899 4 7 21 1 1.079181246 0.416666667 0.571428571 0.75 7 0 0 12 3R:9990241-9990282 8 9 4152 FBgn0267336 810.6266667 20.61 31.68 0.011102522 0.436681223 0.284090909 1 1 1 0.1 dme-miR-317-3p 6mer2-7 GTGTTC 4 1013224 1013229 - 4_1013224_1013229_- 0.753564533 0.999478835 0.876521684 0.173887669 PlexA FBtr0309865 1009893 1014358 4 - 1013216 1013295 3'utr PlexA FlyBase G57250.1 AAAATACCGACGCTTAAATAGTTACCCTTATATAACTTATTTAAAGAACTTATGTGGGTCGCAGGGGTGTTCCGGTTTAT 12 1013226 0.979315855 6 12 100 1 1.079181246 0.25 0 0 12 0 0 12 4:1013216-1013295 6 PlexA FBtr0309865 1009893 1014358 GTGTTC 6mer2-7 dme-miR-317-3p 4 - 1013203 1013252 3'utr PlexA FlyBase G43270.1 AAGAACTTATGTGGGTCGCAGGGGTGTTCCGGTTTATAATGACAAAAAAG 6 1013226 0.963916146 3 6 33 1 0.84509804 0.428571429 0.166666667 0.285714286 6 0 0 7 4:1013203-1013252 6 5.5 4153 FBgn0025741 5407.953333 93.30333333 143.4166667 0.001017021 0.058947519 0.038349797 -3 -3 -3 0.1 dme-miR-2535b-3p 6mer3-8 CCGTGA 4 1034621 1034626 + 4_1034621_1034626_+ 0.999997619 0.976178905 0.988088262 0.016842364 ATPsyn-beta FBtr0344754 1034412 1034917 4 + 1034564 1034671 3'utr ATPsyn-beta FlyBase G56604.1 AAAGCAAAATATTTAATGTGAAAAAGCTTCAGATTAAGTGAGTATATGGTAGTATCACCGTGAAATTCTACAGGTAGAATTTAAACTGACTATTAATTTCTGCATTGG 20 1034618 0.982581571 10 19 143 1 1.342422681 0.181818182 0.1 0.181818182 20 0 0 22 4:1034564-1034671 6 ATPsyn-beta FBtr0344754 1034412 1034917 CCGTGA 6mer3-8 dme-miR-2535b-3p 4 + 1034587 1034664 3'utr ATPsyn-beta FlyBase G42753.1 AAGCTTCAGATTAAGTGAGTATATGGTAGTATCACCGTGAAATTCTACAGGTAGAATTTAAACTGACTATTAATTTCT 11 1034618 0.983733645 5 11 89 1 1.176091259 0.066666667 0.181818182 0.4 11 0 0 15 4:1034587-1034664 6 7.5 4154 FBgn0010217 4002.656667 288.0533333 441.7933333 0.001873756 0.026036845 0.016976263 3 3 3 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 4 1034707 1034712 + 4_1034707_1034712_+ 0.984214223 0.987209839 0.985712031 0.002118209 ATPsyn-beta FBtr0344754 1034412 1034917 4 + 1034691 1034731 3'utr ATPsyn-beta FlyBase G56605.1 ACACTATGTTATCATTTTGACTGACTGTCGAAAATAAACCA 17 1034706 0.666028667 8 16 152 1 1.301029996 0.15 0.176470588 0.3 17 0 0 20 4:1034691-1034731 6 ATPsyn-beta FBtr0344754 1034412 1034917 TTGACT 6mer3-8 dme-miR-1012-3p 4 + 1034678 1034723 3'utr ATPsyn-beta FlyBase G42754.1 TATATTAAAAATTACACTATGTTATCATTTTGACTGACTGTCGAAA 14 1034707 0.987529492 5 14 129 1 1.230448921 0.411764706 0.214285714 0.352941176 14 0 0 17 4:1034678-1034723 6 15 4155 FBgn0010217 4002.656667 288.0533333 441.7933333 0.003747511 0.05207369 0.033952527 1 0 0.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 4 1035750 1035756 - 4_1035750_1035756_- 0.823311562 0.823349291 0.823330427 2.67E-05 CaMKII FBtr0333673|FBtr0300378|FBtr0333674|FBtr0089218|FBtr0333675|FBtr0089219|FBtr0089217|FBtr0100146|FBtr0100148|FBtr0100147 1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286 1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277 4 - 1035744 1035786 3'utr CaMKII FlyBase G57302.1 ACTTAATCATTGTGAAATGATTATACATTTTACCTGATAGTAC 8 1035758 0.756657061 3 7 90 0.888888889 0.602059991 0 0.125 0.222222222 8 0 1 8 4:1035744-1035786 7 CaMKII FBtr0089217|FBtr0100146|FBtr0100148|FBtr0100147|FBtr0333675|FBtr0089219|FBtr0333674|FBtr0089218|FBtr0333673|FBtr0300378 1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286 1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 4 - 1035715 1035774 3'utr CaMKII FlyBase G43304.1 TGAAATGATTATACATTTTACCTGATAGTACATGTTAAAAAAAAACTTGGACTTAAACAC 11 1035758 0.858366592 4 10 74 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 4:1035715-1035774 7 6.5 4156 FBgn0264607 1116.67 52.21333333 80.09666667 0.005820878 0.124489275 0.081151941 2 2 2 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA 4 1037168 1037173 - 4_1037168_1037173_- 0.997892941 0.99578635 0.996839646 0.00148952 CaMKII FBtr0333673|FBtr0300378|FBtr0333674|FBtr0089218|FBtr0333675|FBtr0089219|FBtr0089217|FBtr0100146|FBtr0100148|FBtr0100147 1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286 1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277 4 - 1037127 1037200 3'utr CaMKII FlyBase G57305.1 AATAGTTTATTGCGAATAAAGATGCTAGTGCAAATTTTATTAATTTATTTACCTTTTGAAATAAAACTATCTAA 71 1037178 0.974359831 6 69 430 0.965116279 1.919078092 0.61627907 0.169014085 0.313953488 71 3 0 83 4:1037127-1037200 6 CaMKII FBtr0089217|FBtr0100146|FBtr0100148|FBtr0100147|FBtr0333675|FBtr0089219|FBtr0333674|FBtr0089218|FBtr0333673|FBtr0300378 1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286 1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277 GTGCAA 6mer3-8 dme-miR-92b-3p 4 - 1037153 1037195 3'utr CaMKII FlyBase G43305.1 TTTATTGCGAATAAAGATGCTAGTGCAAATTTTATTAATTTAT 62 1037178 0.855464725 3 61 314 0.990654206 2.025305865 0.635514019 0.403225806 0.654205607 62 1 0 106 4:1037153-1037195 6 66 4157 FBgn0264607 1116.67 52.21333333 80.09666667 0.059104301 1.264044944 0.824004328 5 5 5 0.1 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 4 108111 108118 + 4_108111_108118_+ 0.625362657 0.625362749 0.625362703 0 pan FBtr0308615 104412 110059 4 + 108033 108174 3'utr pan FlyBase G56193.1 TCCTATATTTGCATTGCCATCAATTGGTAATTGTAGTTTAAATATTTCTTCAATGCCAAACACATCCCGAAACCCTATTGGTGCTAACCCACGAGATATTAATAATCCCCTTAGCATCAATCAGCTGACTAAAAGACGTGAA 79 108110 0.957714487 11 78 379 0.989247312 1.963787827 0.086021505 0.151898734 0.279569892 79 1 0 92 4:108033-108174 8 pan FBtr0308615 104412 110059 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 4 + 108090 108131 3'utr pan FlyBase G42420.1 AAACACATCCCGAAACCCTATTGGTGCTAACCCACGAGATAT 33 108110 0.920295414 2 32 140 0.961538462 1.698970004 0.076923077 0.454545455 0.653846154 33 2 0 50 4:108090-108131 8 47.5 4158 FBgn0085432 3045.83 84.67333333 129.51 0.015595092 0.56097945 0.366767045 1 1 1 0.1 dme-miR-14-3p 6mer3-8 AAGACT 4 108211 108216 + 4_108211_108216_+ 0.958592122 0.995838131 0.977215126 0.026336899 pan FBtr0308615 104412 110059 4 + 108180 108289 3'utr pan FlyBase G56194.1 AAATGTTGAGTTAATTGAAGCTAGTGAGTCAAAGACTATAGTTGCCCATGCCGCTACATCCATTATTCAACATGTAGCAGTGAACGGCTATCATGCTAATCACTCGCTTT 55 108219 0.979940788 9 47 330 0.861538462 1.146128036 0.353846154 0.166666667 0.307692308 54 6 3 56 4:108180-108289 6 pan FBtr0308615 104412 110059 AAGACT 6mer3-8 dme-miR-14-3p 4 + 108181 108233 3'utr pan FlyBase G42421.1 AATGTTGAGTTAATTGAAGCTAGTGAGTCAAAGACTATAGTTGCCCATGCCGC 31 108219 0.693869967 5 28 178 0.843137255 1.633468456 0.254901961 0.451612903 0.666666667 31 8 0 43 4:108181-108233 6 35 4159 FBgn0085432 3045.83 84.67333333 129.51 0.011491121 0.413353279 0.270249402 -8 -8 -8 0.1 dme-miR-277-3p 7mer-m8 TGCATTT 4 108825 108831 + 4_108825_108831_+ 0.62011484 0.620109226 0.620112033 3.96E-06 pan FBtr0309803|FBtr0100245|FBtr0308615|FBtr0089162|FBtr0112657|FBtr0089161 108491|108491|104412|108491|108491|108491 114270|109770|110059|110059|110059|110059 4 + 108736 108853 3'utr pan FlyBase G56197.2 AAAGAAACATGAGTCAAATCTCAGGCTAGGCCGTGCCAAATAGAATAAACAGACAATACACACTAAAACTTAGTTACATAAACATCTATTGCATTTGACACCTTATAAAATAATATTT 160 108824 0.994017517 10 156 1233 0.97382199 1.968482949 0.020942408 0.15 0.287958115 160 4 1 186 4:108736-108853 7 pan FBtr0089161|FBtr0089162|FBtr0112657|FBtr0308615|FBtr0309803|FBtr0100245 108491|108491|108491|104412|108491|108491 110059|110059|110059|110059|114270|109770 TGCATTT 7mer-m8 dme-miR-277-3p 4 + 108737 108856 3'utr pan FlyBase G42425.1 AAGAAACATGAGTCAAATCTCAGGCTAGGCCGTGCCAAATAGAATAAACAGACAATACACACTAAAACTTAGTTACATAAACATCTATTGCATTTGACACCTTATAAAATAATATTTTCA 93 108824 0.976874429 8 88 677 0.939189189 2.1430148 0.054054054 0.430107527 0.641891892 93 9 0 139 4:108737-108856 7 108.5 4160 FBgn0085432 3045.83 84.67333333 129.51 0.035622474 1.281395166 0.837773145 1 1 1 0.1 dme-miR-31a-5p 7mer-A1 CTTGCCA 4 108935 108941 + 4_108935_108941_+ 0.823272957 0.823349432 0.823311194 5.40E-05 pan FBtr0309803|FBtr0100245|FBtr0308615|FBtr0089162|FBtr0112657|FBtr0089161 108491|108491|104412|108491|108491|108491 114270|109770|110059|110059|110059|110059 4 + 108877 108953 3'utr pan FlyBase G56198.1 TCTATTTATTTAGCTTAACACAACCAAATTATGTATTTTATTTTAAAATTAGACACAACTTGCCAAAATCCATTAAT 14 108914 0.98663349 9 13 118 0.928571429 1.113943352 0 0 0 14 1 0 13 4:108877-108953 7 pan FBtr0089161|FBtr0089162|FBtr0112657|FBtr0308615|FBtr0309803|FBtr0100245 108491|108491|108491|104412|108491|108491 110059|110059|110059|110059|114270|109770 CTTGCCA 7mer-A1 dme-miR-31a-5p 4 + 108896 108947 3'utr pan FlyBase G42426.1 ACAACCAAATTATGTATTTTATTTTAAAATTAGACACAACTTGCCAAAATCC 7 108905 0.933265951 5 6 51 1 1 0 0.285714286 0.5 7 0 0 10 4:108896-108947 7 4 4161 FBgn0085432 3045.83 84.67333333 129.51 0.001313271 0.047240375 0.030885646 21 30 25.5 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 4 109734 109739 + 4_109734_109739_+ 0.881792388 1 0.940896194 0.083585396 pan FBtr0309803|FBtr0309803|FBtr0100245|FBtr0100245|FBtr0308615|FBtr0308615|FBtr0089162|FBtr0089162|FBtr0112657|FBtr0112657|FBtr0089161|FBtr0089161 108491|108491|108491|108491|104412|104412|108491|108491|108491|108491|108491|108491 114270|114270|109770|109770|110059|110059|110059|110059|110059|110059|110059|110059 4 + 109693 109764 3'utr pan FlyBase G56203.1 TTTCTTTAGTTAGGTTTCATTAGCAGACTTTCATTATTACATACTTACACGGAAAATCATAATAAACAAAAT 7 109710 0.989874505 5 7 70 1 0.954242509 0.111111111 0.142857143 0.333333333 7 0 0 9 4:109693-109764 6 pan FBtr0089161|FBtr0089161|FBtr0089162|FBtr0089162|FBtr0112657|FBtr0112657|FBtr0308615|FBtr0308615|FBtr0309803|FBtr0309803|FBtr0100245|FBtr0100245 108491|108491|108491|108491|108491|108491|104412|104412|108491|108491|108491|108491 110059|110059|110059|110059|110059|110059|110059|110059|114270|114270|109770|109770 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 4 + 109697 109752 3'utr pan FlyBase G42432.1 TTTAGTTAGGTTTCATTAGCAGACTTTCATTATTACATACTTACACGGAAAATCAT 7 109738 0.977818992 7 7 48 1 1.113943352 0 0.428571429 0.692307692 7 0 0 13 4:109697-109752 6 3.5 4162 FBgn0085432 3045.83 84.67333333 129.51 0.001149112 0.041335328 0.02702494 24 -4 10 0.1 dme-miR-1006-3p 8mer-A1 CGAATTTA 4 109902 109909 + 4_109902_109909_+ 0.67169751 0.6716899 0.671693705 5.37E-06 pan FBtr0309803|FBtr0308615|FBtr0089162|FBtr0112657|FBtr0089161 108491|104412|108491|108491|108491 114270|110059|110059|110059|110059 4 + 109828 109949 3'utr pan FlyBase G56204.1 ATATGTGTACGATATATATTATAAGCTAAATGTAAATATGTATTTTCTTATATAGAACGTACTGATAATCTTTACGAATTTATTGACCATAAGACCTGATAGCCTTTATTCCATGTAAAACG 197 109917 0.870164064 21 179 1457 0.903361345 1.55428721 0.071428571 0.172588832 0.31512605 197 18 5 215 4:109828-109949 8 pan FBtr0089161|FBtr0089162|FBtr0112657|FBtr0308615|FBtr0309803 108491|108491|108491|104412|108491 110059|110059|110059|110059|114270 CGAATTTA 8mer-A1 dme-miR-1006-3p 4 + 109850 109972 3'utr pan FlyBase G42433.1 AAGCTAAATGTAAATATGTATTTTCTTATATAGAACGTACTGATAATCTTTACGAATTTATTGACCATAAGACCTGATAGCCTTTATTCCATGTAAAACGTAAAATCCACATCTACAAACGAA 126 109927 0.982028755 19 117 869 0.922680412 2.252853031 0.113402062 0.404761905 0.613402062 126 15 0 179 4:109850-109972 8 52 4163 FBgn0085432 3045.83 84.67333333 129.51 0.017072522 0.614124872 0.401513397 -15 -25 -20 0.1 dme-miR-190-5p 8mer-m1 ACATATCT 4 110236 110243 + 4_110236_110243_+ 0.574953629 0.465974291 0.52046396 0.077060002 pan FBtr0309803 108491 114270 4 + 110164 110279 3'utr pan FlyBase G56206.1 TTGTTTTTAATGTGTTAGTTATTTAAAATGCTTTAGGTTTAATTATCTCATATGTACACCGGTACTTAATATACATATCTTGATTTTCCGGAATGACAATCCTGTATATCCTATAA 22 110234 0.988908584 11 19 192 0.892857143 1.397940009 0.214285714 0.181818182 0.357142857 22 3 0 25 4:110164-110279 8 pan FBtr0309803 108491 114270 ACATATCT 8mer-m1 dme-miR-190-5p 4 + 110176 110263 3'utr pan FlyBase G42436.1 TGTTAGTTATTTAAAATGCTTTAGGTTTAATTATCTCATATGTACACCGGTACTTAATATACATATCTTGATTTTCCGGAATGACAAT 32 110233 0.980541349 15 30 323 0.9375 1.653212514 0.104166667 0.375 0.583333333 32 3 0 45 4:110176-110263 8 11 4164 FBgn0085432 3045.83 84.67333333 129.51 0.003611495 0.129911031 0.084935526 2 3 2.5 0.1 dme-miR-970-3p 6mer3-8 TCTTAT 4 110630 110635 + 4_110630_110635_+ 0.999998702 0.999748079 0.99987339 0.000177201 pan FBtr0309803 108491 114270 4 + 110493 110807 3'utr pan FlyBase G56209.1 TTTCAATTGTAATGCCAATAAATTTTTAAAATATCATTCTTACCCTCTGGGTTGATTAACGTGTATCTAGTAGTGTAGAAAATCAACTTTACTATAGTAACTAAAATTTAAATGGTAAACAACTTTTAAAACGTATCTCTTATTTTACTTTATATTAGGAGTATTATAATTTTTAAATTGTATAGACACAAAATCTTCATTGACCGTGCTAAAGTAAAGACATAAATGCGAGCATAACTAAGCATTTTAATAACCTTATTTTAACTAAGATATTTACAGTATTGCCAAATGTTGTTGCGAATATATATATAAAAA 181 110632 0.987794173 36 176 1586 0.967741935 2.322219295 0.129032258 0.165745856 0.304147465 181 7 0 210 4:110493-110807 6 pan FBtr0309803 108491 114270 TCTTAT 6mer3-8 dme-miR-970-3p 4 + 110604 110664 3'utr pan FlyBase G42438.2 ATGGTAAACAACTTTTAAAACGTATCTCTTATTTTACTTTATATTAGGAGTATTATAATTT 43 110632 0.693535057 7 40 439 0.964285714 1.73239376 0.017857143 0.285714286 0.464285714 42 2 0 54 4:110604-110664 6 57.5 4165 FBgn0085432 3045.83 84.67333333 129.51 0.01887827 0.679080387 0.44398116 -2 -2 -2 0.1 dme-miR-970-3p 6mer2-7 CTTATG 4 110894 110899 + 4_110894_110899_+ 0.960962419 0.999322783 0.980142601 0.027124899 pan FBtr0309803 108491 114270 4 + 110861 110921 3'utr pan FlyBase G56210.1 ATTTCCCTTTATTGTCTTTCCTTTTTCATAAGCCTTATGTAACTGATAGCATTTGTAAATA 27 110897 0.985390143 12 26 206 0.96875 1.491361694 0.21875 0.148148148 0.28125 27 1 0 31 4:110861-110921 6 pan FBtr0309803 108491 114270 CTTATG 6mer2-7 dme-miR-970-3p 4 + 110881 110920 3'utr pan FlyBase G42440.1 CTTTTTCATAAGCCTTATGTAACTGATAGCATTTGTAAAT 11 110898 0.984870316 4 8 82 0.692307692 0.954242509 0 0.181818182 0.307692308 11 4 0 9 4:110881-110920 6 16.5 4166 FBgn0085432 3045.83 84.67333333 129.51 0.005417243 0.194866546 0.127403289 -3 -4 -3.5 0.1 dme-miR-252-5p 6mer3-8 GTACTT 4 1115157 1115162 - 4_1115157_1115162_- 0.999989491 0.999999998 0.999994745 7.42E-06 Cals FBtr0345193|FBtr0089208 1112872|1115077 1115826|1115826 4 - 1115137 1115231 3'utr Cals FlyBase G57337.1 AACTTAGATTAAGGAACATATCGAAGCTATAAAAAATTTATTTTCAACCGACCATAAACTTGTGAAATTGTACTTTTAAAATAGAATTTTTAATT 23 1115163 0.966308239 9 23 130 1 1.462397998 0.068965517 0.173913043 0.344827586 23 0 0 29 4:1115137-1115231 6 Cals FBtr0345193|FBtr0089208 1112872|1115077 1115826|1115826 GTACTT 6mer3-8 dme-miR-252-5p 4 - 1115152 1115183 3'utr Cals FlyBase G43324.1 CGACCATAAACTTGTGAAATTGTACTTTTAAA 6 1115163 0.697687705 2 6 41 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 4:1115152-1115183 6 8.5 4167 FBgn0039928 3212.163333 100.7466667 154.9366667 0.002646192 0.084370037 0.054861126 1 1 1 0.1 dme-miR-184-3p 7mer-m8 TCCGTCC 4 1115354 1115360 - 4_1115354_1115360_- 0.661615239 0.661615242 0.66161524 0 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 4 - 1115271 1115478 3'utr Cals FlyBase G57338.1 AAATATACACATAAGATCTATTTAATTTATAGTTTGTCAGCCCTCACCTTAAGATGTAAAATGCACATGTCTACCAAATTTCAACTGAATTCTGTCGCAATGCATAGGAGGAAGTTTCTCCGTCCCAATAATTTAAGCCTAATAATAAAACATAAAAAAAATTTGAAATGGATCGTAATACCCAAACAATGTTGACTTATTTAATAAA 253 1115361 0.983445027 36 232 1788 0.918644068 1.8309093 0.088135593 0.134387352 0.257627119 253 21 3 271 4:1115271-1115478 7 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 TCCGTCC 7mer-m8 dme-miR-184-3p 4 - 1115338 1115477 3'utr Cals FlyBase G43326.1 AATATACACATAAGATCTATTTAATTTATAGTTTGTCAGCCCTCACCTTAAGATGTAAAATGCACATGTCTACCAAATTTCAACTGAATTCTGTCGCAATGCATAGGAGGAAGTTTCTCCGTCCCAATAATTTAAGCCTA 119 1115361 0.82768637 25 108 801 0.926966292 2.217483944 0.078651685 0.361344538 0.573033708 119 13 0 165 4:1115338-1115477 7 68 4168 FBgn0039928 3212.163333 100.7466667 154.9366667 0.021169534 0.674960296 0.438889008 1 1 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 4 1115401 1115406 - 4_1115401_1115406_- 0.962769684 0.999774784 0.981272234 0.026166557 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 4 - 1115271 1115478 3'utr Cals FlyBase G57338.1 AAATATACACATAAGATCTATTTAATTTATAGTTTGTCAGCCCTCACCTTAAGATGTAAAATGCACATGTCTACCAAATTTCAACTGAATTCTGTCGCAATGCATAGGAGGAAGTTTCTCCGTCCCAATAATTTAAGCCTAATAATAAAACATAAAAAAAATTTGAAATGGATCGTAATACCCAAACAATGTTGACTTATTTAATAAA 253 1115399 0.983445027 36 232 1788 0.918644068 1.8309093 0.088135593 0.134387352 0.257627119 253 21 3 271 4:1115271-1115478 6 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 4 - 1115338 1115477 3'utr Cals FlyBase G43326.1 AATATACACATAAGATCTATTTAATTTATAGTTTGTCAGCCCTCACCTTAAGATGTAAAATGCACATGTCTACCAAATTTCAACTGAATTCTGTCGCAATGCATAGGAGGAAGTTTCTCCGTCCCAATAATTTAAGCCTA 119 1115399 0.82768637 25 108 801 0.926966292 2.217483944 0.078651685 0.361344538 0.573033708 119 13 0 165 4:1115338-1115477 6 70.5 4169 FBgn0039928 3212.163333 100.7466667 154.9366667 0.021947825 0.699775013 0.455024634 -7 -7 -7 0.1 dme-miR-305-5p 8mer-m1 AGTACAAT 4 1115532 1115539 - 4_1115532_1115539_- 0.570363044 0.570363044 0.570363044 0 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 4 - 1115501 1115556 3'utr Cals FlyBase G57339.1 AAATATAGCTAAGGTATAGTACAATTATTATGTAACCAGCGTCGCTAGATCCATAA 15 1115531 0.721025649 5 12 107 0.85 1.230448921 0.05 0.266666667 0.45 15 3 0 17 4:1115501-1115556 8 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 AGTACAAT 8mer-m1 dme-miR-305-5p 4 - 1115511 1115558 3'utr Cals FlyBase G43327.1 AAAAATATAGCTAAGGTATAGTACAATTATTATGTAACCAGCGTCGCT 11 1115531 0.724160438 7 8 75 0.769230769 1 0.076923077 0.181818182 0.307692308 11 3 0 10 4:1115511-1115558 8 8.5 4170 FBgn0039928 3212.163333 100.7466667 154.9366667 0.002646192 0.084370037 0.054861126 -8 -8 -8 0.1 dme-miR-276a-3p 6mer3-8 AGTTCC 4 1115721 1115726 - 4_1115721_1115726_- 0.938244795 0.944262283 0.941253539 0.004255015 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 4 - 1115654 1115736 3'utr Cals FlyBase G57340.2 GTTATAAATGAGTTCCAAAGAGTCTGCATATATGGCTGCAGGCATAATTGTAAAGACGTGCATTTATAGTTTTTTTTGCAACA 31 1115724 0.825079658 7 27 186 0.909090909 1.176091259 0.212121212 0.032258065 0.090909091 31 2 1 30 4:1115654-1115736 6 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 AGTTCC 6mer3-8 dme-miR-276a-3p 4 - 1115692 1115738 3'utr Cals FlyBase G43328.1 AAGTTATAAATGAGTTCCAAAGAGTCTGCATATATGGCTGCAGGCAT 11 1115724 0.975506843 2 10 60 0.923076923 1.079181246 0.153846154 0.181818182 0.307692308 11 1 0 12 4:1115692-1115738 6 12.5 4171 FBgn0039928 3212.163333 100.7466667 154.9366667 0.003891458 0.124073584 0.080678127 -2 -2 -2 0.1 dme-miR-932-5p 7mer-m8 GGAATTG 4 1125061 1125067 + 4_1125061_1125067_+ 0.70297287 0.702972869 0.70297287 0 Arf102F FBtr0089192 1125035 1125325 4 + 1125040 1125142 3'utr Arf102F FlyBase G56613.1 TATTCCTTATATTGTAAGATAGGAATTGCTGTTCTCGTATGCTGAAAACTAGATTTTAAATAAACTTGTAAATGTATATAAACTCGTTTGGAACTTTGTTGTA 43 1125079 0.867436297 14 40 362 0.9375 1.352182518 0.291666667 0.11627907 0.208333333 43 2 1 45 4:1125040-1125142 7 Arf102F FBtr0089192 1125035 1125325 GGAATTG 7mer-m8 dme-miR-932-5p 4 + 1125050 1125102 3'utr Arf102F FlyBase G42763.1 ATTGTAAGATAGGAATTGCTGTTCTCGTATGCTGAAAACTAGATTTTAAATAA 40 1125067 0.690812684 8 36 293 0.938461538 1.183269844 0.215384615 0.5 0.692307692 40 1 3 61 4:1125050-1125102 7 31 4172 FBgn0013749 854.0466667 143.2933333 218.6 0.036297782 0.216339444 0.141811528 -18 -6 -12 0.1 dme-miR-31a-5p 6mer2-7 CTTGCC 4 1125186 1125191 + 4_1125186_1125191_+ 0.999993932 0.999992618 0.999993275 9.19E-07 Arf102F FBtr0089192 1125035 1125325 4 + 1125152 1125217 3'utr Arf102F FlyBase G56614.1 TGTCCACGTTTTATGTGTTGGTGAGAAAACTGCACTTGCCTTAGTTGTATTTTTAAAAATTAGTGA 12 1125191 0.987250927 4 12 119 1 1.176091259 0.2 0.25 0.4 12 0 0 15 4:1125152-1125217 6 Arf102F FBtr0089192 1125035 1125325 CTTGCC 6mer2-7 dme-miR-31a-5p 4 + 1125136 1125204 3'utr Arf102F FlyBase G42764.1 TGTTGTAAATTTAAAATGTCCACGTTTTATGTGTTGGTGAGAAAACTGCACTTGCCTTAGTTGTATTTT 13 1125192 0.981910858 7 12 92 1 1.230448921 0.352941176 0.307692308 0.470588235 13 0 0 17 4:1125136-1125204 6 9.5 4173 FBgn0013749 854.0466667 143.2933333 218.6 0.011123514 0.066297571 0.043458371 -5 -6 -5.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 4 112846 112853 + 4_112846_112853_+ 0.541680105 0.626947429 0.584313767 0.060293086 pan FBtr0309803|FBtr0309803|FBtr0309803 108491|108491|108491 114270|114270|114270 4 + 112824 112867 3'utr pan FlyBase G56212.1 TAGAAATTCAACAAATACACTGCTGTGATAAATCTAATTAACGA 28 112844 0.834744802 3 26 167 0.933333333 1.447158031 0 0.071428571 0.133333333 28 2 0 28 4:112824-112867 8 pan FBtr0309803|FBtr0309803|FBtr0309803 108491|108491|108491 114270|114270|114270 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 4 + 112812 112859 3'utr pan FlyBase G42442.1 TTACATCAAGTTTAGAAATTCAACAAATACACTGCTGTGATAAATCTA 17 112844 0.977483512 5 16 107 0.966666667 1.462397998 0 0.411764706 0.666666667 17 1 0 29 4:112812-112859 8 21.5 4174 FBgn0085432 3045.83 84.67333333 129.51 0.007058831 0.253917014 0.166010347 2 2 2 0.1 dme-miR-14-3p 7mer-m8 AAGACTG 4 113107 113113 + 4_113107_113113_+ 0.671465716 0.671746418 0.671606067 0.000198485 pan FBtr0309803 108491 114270 4 + 113087 113126 3'utr pan FlyBase G56213.1 AAAGGCCATTGCCAATTTAAAAGACTGTTTAACACAAATT 22 113115 0.662937892 6 21 153 0.931034483 1.431363764 0 0.318181818 0.482758621 22 2 0 27 4:113087-113126 7 pan FBtr0309803 108491 114270 AAGACTG 7mer-m8 dme-miR-14-3p 4 + 113088 113124 3'utr pan FlyBase G42443.1 AAGGCCATTGCCAATTTAAAAGACTGTTTAACACAAA 13 113114 0.653518928 4 12 96 0.875 1.322219295 0 0.461538462 0.708333333 13 3 0 21 4:113088-113124 7 17.5 4175 FBgn0085432 3045.83 84.67333333 129.51 0.00574556 0.20667664 0.135124701 -8 -7 -7.5 0.1 dme-miR-14-3p 6mer2-7 AGACTG 4 1223079 1223084 + 4_1223079_1223084_+ 0.808135998 0.647344092 0.727740045 0.113697043 Mitf FBtr0307327|FBtr0307328|FBtr0307326|FBtr0307329 1222790|1222790|1222790|1222790 1223450|1223450|1224467|1224467 4 + 1223051 1223100 5'utr Mitf FlyBase G56626.2 ACGTTAGTTTTAGTAAATGGAAACTGTTAGACTGTGACGAAACAAATATA 338 1223077 0.638489651 6 331 1807 0.985294118 2.303196057 0.424019608 0.174556213 0.316176471 338 5 1 402 4:1223051-1223100 6 Mitf FBtr0307327|FBtr0307328|FBtr0307326|FBtr0307329 1222790|1222790|1222790|1222790 1223450|1223450|1224467|1224467 AGACTG 6mer2-7 dme-miR-14-3p 4 + 1223051 1223099 5'utr Mitf FlyBase G42775.1 ACGTTAGTTTTAGTAAATGGAAACTGTTAGACTGTGACGAAACAAATAT 269 1223078 0.623494096 7 261 1355 0.976439791 2.571708832 0.363874346 0.31598513 0.518324607 269 9 0 373 4:1223051-1223099 6 302 4176 FBgn0263112 1506.45 56.91333333 87.3 0.200471307 5.306313693 3.459335624 2 1 1.5 0.1 dme-miR-184-5p 6mer3-8 TGATAA 4 1223214 1223219 + 4_1223214_1223219_+ 0.87574934 0.841630688 0.858690014 0.024125493 Mitf FBtr0307327|FBtr0307328|FBtr0307326|FBtr0307329 1222790|1222790|1222790|1222790 1223450|1223450|1224467|1224467 4 + 1223101 1223254 5'utr Mitf FlyBase G56627.1 TGTGTCAACACTTACTTCCAAGAACTACATAGACACAAACAAAATATACCGATGAGAAAAAAAGAATATAAAGTTTGTAAGTTATTGTGGATTTTTTCATAAGATTTGTGATTTGATAAAAAAAACACGAAATAAGAATGGTCTAATATTATAT 53 1223213 0.982291435 15 52 386 0.985294118 1.826074803 0.029411765 0.245283019 0.411764706 53 1 0 67 4:1223101-1223254 6 Mitf FBtr0307327|FBtr0307328|FBtr0307326|FBtr0307329 1222790|1222790|1222790|1222790 1223450|1223450|1224467|1224467 TGATAA 6mer3-8 dme-miR-184-5p 4 + 1223105 1223257 5'utr Mitf FlyBase G42776.1 TCAACACTTACTTCCAAGAACTACATAGACACAAACAAAATATACCGATGAGAAAAAAAGAATATAAAGTTTGTAAGTTATTGTGGATTTTTTCATAAGATTTGTGATTTGATAAAAAAAACACGAAATAAGAATGGTCTAATATTATATATA 36 1223213 0.946059324 14 35 305 0.965517241 1.748188027 0 0.444444444 0.655172414 36 2 0 56 4:1223105-1223257 6 24 4177 FBgn0263112 1506.45 56.91333333 87.3 0.015931495 0.421693803 0.274914089 1 1 1 0.1 dme-miR-184-5p 6mer3-8 TGATAA 4 1223318 1223323 + 4_1223318_1223323_+ 0.72567195 0.723956264 0.724814107 0.001213112 Mitf FBtr0307327|FBtr0307328|FBtr0307326|FBtr0307329 1222790|1222790|1222790|1222790 1223450|1223450|1224467|1224467 4 + 1223263 1223352 5'utr Mitf FlyBase G56628.1 AATCTAAATCATCAGGTATAATTTCAGAGCGCCTTCCTTTTCAAATAAGGAGTTGTGATAATTGTGTATATTAACATTGACAAATGTTTT 59 1223315 0.936208323 14 56 486 0.943661972 1.826074803 0.098591549 0.186440678 0.323943662 59 4 0 67 4:1223263-1223352 6 Mitf FBtr0307327|FBtr0307328|FBtr0307326|FBtr0307329 1222790|1222790|1222790|1222790 1223450|1223450|1224467|1224467 TGATAA 6mer3-8 dme-miR-184-5p 4 + 1223269 1223346 5'utr Mitf FlyBase G42777.1 AATCATCAGGTATAATTTCAGAGCGCCTTCCTTTTCAAATAAGGAGTTGTGATAATTGTGTATATTAACATTGACAAA 45 1223324 0.734396296 13 43 351 0.938461538 1.086359831 0.276923077 0.377777778 0.569230769 45 0 4 61 4:1223269-1223346 6 29 4178 FBgn0263112 1506.45 56.91333333 87.3 0.019250556 0.509546679 0.332187858 3 -6 -1.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 4 1223688 1223694 + 4_1223688_1223694_+ 0.753043721 0.731939687 0.742491704 0.014922782 Mitf FBtr0307326|FBtr0307326|FBtr0307326|FBtr0307329|FBtr0307329|FBtr0307329 1222790|1222790|1222790|1222790|1222790|1222790 1224467|1224467|1224467|1224467|1224467|1224467 4 + 1223622 1223708 3'utr Mitf FlyBase G56629.1 ATGATTCGTTAAAGTTGTCCGATCTTCATGAGTGCTACAGCATTGAAAATGTAGTCCAAAAACTAATGTGATAATATAATAAGAACT 33 1223685 0.863521711 12 30 222 0.95 1.579783597 0.25 0.212121212 0.35 33 2 0 38 4:1223622-1223708 7 Mitf FBtr0307326|FBtr0307326|FBtr0307326|FBtr0307329|FBtr0307329|FBtr0307329 1222790|1222790|1222790|1222790|1222790|1222790 1224467|1224467|1224467|1224467|1224467|1224467 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 4 + 1223629 1223711 3'utr Mitf FlyBase G42779.1 GTTAAAGTTGTCCGATCTTCATGAGTGCTACAGCATTGAAAATGTAGTCCAAAAACTAATGTGATAATATAATAAGAACTTAA 23 1223686 0.971937342 7 22 149 0.971428571 1.230448921 0.085714286 0.391304348 0.6 23 0 1 34 4:1223629-1223711 7 15.5 4179 FBgn0263112 1506.45 56.91333333 87.3 0.01028909 0.272343915 0.177548683 3 2 2.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 4 1225679 1225684 - 4_1225679_1225684_- 0.999999989 0.999996965 0.999998477 2.12E-06 Dyrk3 FBtr0100406 1225087 1226157 4 - 1225672 1225732 3'utr Dyrk3 FlyBase G57397.1 ATCGAATGTGTACATTATTTATTTAATAATTCCGAATTTTTAAAACAGTGATCTTTGCCAA 9 1225682 0.990629088 6 8 76 0.916666667 0.740362689 0 0.333333333 0.5 9 0 1 11 4:1225672-1225732 6 Dyrk3 FBtr0100406 1225087 1226157 TGATCT 6mer3-8 dme-bantam-3p 4 - 1225665 1225694 3'utr Dyrk3 FlyBase G43373.1 TTTAAAACAGTGATCTTTGCCAATTTTTTT 8 1225680 0.625997628 3 7 57 0.916666667 1.041392685 0 0.25 0.5 8 1 0 11 4:1225665-1225694 6 7.5 4180 FBgn0027101 1644.923333 56.32666667 86.10666667 0.004559483 0.133151852 0.08710127 -2 -4 -3 0.1 dme-miR-276a-3p 8mer-A1 AGTTCCTA 4 142899 142906 + 4_142899_142906_+ 0.637906979 0.637874834 0.637890906 2.28E-05 CG32000 FBtr0089451|FBtr0089448|FBtr0089449|FBtr0333161|FBtr0113417 142794|142794|142794|142794|142794 143123|143123|143123|143123|143123 4 + 142850 143089 3'utr CG32000 FlyBase G56253.1 TTAGGAATTTCCATTATTAATACAGTAGAAAATGTAGGCAAAATTATTTAGTTCCTATTTAGTTTTTTTAGTAATCTTAGTATTTCTAATTGTACTTACATCAAAGATAACTTTGTATTAGCTATGAACACTTTTGTCTTTCTATGTTTAAAACGGCGTTGTTTCTTGATTATAATTAAGTGTTTGATGTTTATATACATAAGCAAAAATTCATATAGGCTGTATAATAAGCATTGGAGT 206 142897 0.934845437 41 188 2096 0.92519685 1.893946608 0.165354331 0.175609756 0.334645669 205 17 2 235 4:142850-143089 8 CG32000 FBtr0089451|FBtr0113417|FBtr0333161|FBtr0089449|FBtr0089448 142794|142794|142794|142794|142794 143123|143123|143123|143123|143123 AGTTCCTA 8mer-A1 dme-miR-276a-3p 4 + 142845 143032 3'utr CG32000 FlyBase G42466.1 TACTTTTAGGAATTTCCATTATTAATACAGTAGAAAATGTAGGCAAAATTATTTAGTTCCTATTTAGTTTTTTTAGTAATCTTAGTATTTCTAATTGTACTTACATCAAAGATAACTTTGTATTAGCTATGAACACTTTTGTCTTTCTATGTTTAAAACGGCGTTGTTTCTTGATTATAATTAAGTGT 105 142897 0.992228598 31 98 1136 0.944099379 2.181843588 0.198757764 0.40952381 0.614906832 105 9 0 152 4:142845-143032 8 41.5 4181 FBgn0052000 5598.68 138.82 213.5633333 0.007412462 0.298948278 0.194321747 2 2 2 0.1 dme-miR-252-5p 7mer-m8 GTACTTA 4 142941 142947 + 4_142941_142947_+ 0.483600218 0.588287956 0.535944087 0.074025453 CG32000 FBtr0089451|FBtr0089448|FBtr0089449|FBtr0333161|FBtr0113417 142794|142794|142794|142794|142794 143123|143123|143123|143123|143123 4 + 142850 143089 3'utr CG32000 FlyBase G56253.1 TTAGGAATTTCCATTATTAATACAGTAGAAAATGTAGGCAAAATTATTTAGTTCCTATTTAGTTTTTTTAGTAATCTTAGTATTTCTAATTGTACTTACATCAAAGATAACTTTGTATTAGCTATGAACACTTTTGTCTTTCTATGTTTAAAACGGCGTTGTTTCTTGATTATAATTAAGTGTTTGATGTTTATATACATAAGCAAAAATTCATATAGGCTGTATAATAAGCATTGGAGT 206 142940 0.934845437 41 188 2096 0.92519685 1.893946608 0.165354331 0.175609756 0.334645669 205 17 2 235 4:142850-143089 7 CG32000 FBtr0089451|FBtr0113417|FBtr0333161|FBtr0089449|FBtr0089448 142794|142794|142794|142794|142794 143123|143123|143123|143123|143123 GTACTTA 7mer-m8 dme-miR-252-5p 4 + 142845 143032 3'utr CG32000 FlyBase G42466.1 TACTTTTAGGAATTTCCATTATTAATACAGTAGAAAATGTAGGCAAAATTATTTAGTTCCTATTTAGTTTTTTTAGTAATCTTAGTATTTCTAATTGTACTTACATCAAAGATAACTTTGTATTAGCTATGAACACTTTTGTCTTTCTATGTTTAAAACGGCGTTGTTTCTTGATTATAATTAAGTGT 105 142940 0.992228598 31 98 1136 0.944099379 2.181843588 0.198757764 0.40952381 0.614906832 105 9 0 152 4:142845-143032 7 28.5 4182 FBgn0052000 5598.68 138.82 213.5633333 0.005090486 0.20530183 0.133449874 1 1 1 0.1 dme-miR-980-5p 8mer-m1 GAAAAACT 4 177919 177926 - 4_177919_177926_- 0.605188193 0.599714212 0.602451202 0.003870703 Arl4 FBtr0333677 177436 178817 4 - 177893 177994 intron-3'utr Arl4 FlyBase G56733.1 AGGGTGTTCCCGTTCTGATACTAGCAAATAAACAGGATCTGCCCAACGCTTGTGGTGCAATGGAACTGGAAAAACTTTTAGGACTGAACGAACTTTACAACC 21 177917 0.972408134 11 20 117 0.956521739 1.342422681 0.130434783 0.095238095 0.173913043 21 1 0 22 4:177893-177994 8 Arl4 FBtr0333677 177436 178817 GAAAAACT 8mer-m1 dme-miR-980-5p 4 - 177898 177952 3'utr Arl4 FlyBase G42857.1 CCAACGCTTGTGGTGCAATGGAACTGGAAAAACTTTTAGGACTGAACGAACTTTA 23 177917 0.694296884 6 16 100 0.727272727 0.77815125 0.090909091 0.347826087 0.545454545 23 6 3 24 4:177898-177952 8 16.5 4183 FBgn0039889 1176.36 144.06 220.9733333 0.014026318 0.11453561 0.074669643 -9 -9 -9 0.1 dme-miR-999-3p 6mer3-8 AGTTAA 4 196970 196975 - 4_196970_196975_- 0.967993869 0.997365092 0.98267948 0.020768575 CG31998 FBtr0308249 196673 197877 4 - 196912 197077 3'utr CG31998 FlyBase G56757.2 GCTTATAAAAATAAAAAAATTCTTAAGACTACAACAACCTAAATTCGTTTAATATAAGTTAAAAGCCTGTTACAATTAAACGTTAATTACATAGTACTGATTAGTTAAGGGTATTGCATTTTCTATTGTTAAATCTTCCAAAATATACGGATCCTTATTAATAATT 400 196964 0.869040397 36 373 3310 0.942184154 1.865301426 0.143468951 0.1475 0.269807281 400 22 5 440 4:196912-197077 6 CG31998 FBtr0308249 196673 197877 AGTTAA 6mer3-8 dme-miR-999-3p 4 - 196892 197071 3'utr CG31998 FlyBase G42876.1 AAAAATAAAAAAATTCTTAAGACTACAACAACCTAAATTCGTTTAATATAAGTTAAAAGCCTGTTACAATTAAACGTTAATTACATAGTACTGATTAGTTAAGGGTATTGCATTTTCTATTGTTAAATCTTCCAAAATATACGGATCCTTATTAATAATTATATTTAGGTGTTCAATTGT 276 197005 0.986992216 33 258 2251 0.935866983 2.118374967 0.173396675 0.376811594 0.591448931 276 25 2 394 4:196892-197071 6 151.5 4184 FBgn0051998 3188.316667 75.81333333 116.5333333 0.047517237 1.99832923 1.300057208 -11 30 9.5 0.1 dme-miR-184-5p 6mer2-7 GATAAG 4 197149 197154 - 4_197149_197154_- 0.999885895 0.9997905 0.999838198 6.75E-05 CG31998 FBtr0308249 196673 197877 4 - 197137 197191 3'utr CG31998 FlyBase G56758.1 TTTAAAGTTCATAAAAGAAATATTGGTTTTCATGTAAGATAAGTATTTTAAAAAG 14 197159 0.988962131 6 12 117 0.941176471 0.903089987 0.176470588 0.214285714 0.352941176 14 0 1 16 4:197137-197191 6 CG31998 FBtr0308249 196673 197877 GATAAG 6mer2-7 dme-miR-184-5p 4 - 197131 197169 3'utr CG31998 FlyBase G42878.1 TTGGTTTTCATGTAAGATAAGTATTTTAAAAAGGCCGTA 8 197159 0.977043385 2 8 71 1 1 0.2 0.25 0.4 8 0 0 10 4:197131-197169 6 9.5 4185 FBgn0051998 3188.316667 75.81333333 116.5333333 0.002979629 0.125307773 0.081521739 5 5 5 0.1 dme-miR-33-5p 6mer2-7 AATGCA 4 197359 197364 - 4_197359_197364_- 0.998564185 0.999013579 0.998788882 0.000317774 CG31998 FBtr0308249 196673 197877 4 - 197301 197417 3'utr CG31998 FlyBase G56759.1 TAATAATGTAACATACTGATTAAATTTATTATAAAAAAGTATGCGGTCCGATTAATGCAGGATACGAACTTGAAAAATTAAATATATAACATGATATTTTTAGATTATGATTTAAAA 41 197362 0.841691435 14 41 252 1 1.698970004 0.18 0.170731707 0.32 41 0 0 50 4:197301-197417 6 CG31998 FBtr0308249 196673 197877 AATGCA 6mer2-7 dme-miR-33-5p 4 - 197339 197412 3'utr CG31998 FlyBase G42879.1 ATGTAACATACTGATTAAATTTATTATAAAAAAGTATGCGGTCCGATTAATGCAGGATACGAACTTGAAAAATT 27 197362 0.953208813 5 26 130 1 1.568201724 0.324324324 0.333333333 0.513513514 27 0 0 37 4:197339-197412 6 26 4186 FBgn0051998 3188.316667 75.81333333 116.5333333 0.008154773 0.342947591 0.223112128 -2 -2 -2 0.1 dme-miR-14-3p 7mer-m8 AAGACTG 4 212848 212854 + 4_212848_212854_+ 0.400396911 0.567296473 0.483846692 0.118015839 Crk FBtr0304871|FBtr0345065|FBtr0345064 212179|211892|212726 213165|213165|213165 4 + 212792 212878 3'utr Crk FlyBase G56261.1 GAAAACTACCTGCATACGCCCGCGTAAAACAGTCAAGGGTCCCTAACGCATACGATAAGACTGCATTAAAATTGGAAATAGGTGACA 126 212847 0.919134827 9 108 609 0.873417722 1.838849091 0.03164557 0.222222222 0.379746835 126 19 1 138 4:212792-212878 7 Crk FBtr0304871|FBtr0345065|FBtr0345064 212179|211892|212726 213165|213165|213165 AAGACTG 7mer-m8 dme-miR-14-3p 4 + 212827 212867 3'utr Crk FlyBase G42475.1 AGGGTCCCTAACGCATACGATAAGACTGCATTAAAATTGGA 68 212847 0.775801572 6 58 303 0.846153846 1.467361417 0 0.352941176 0.576923077 68 14 2 88 4:212827-212867 7 91.5 4187 FBgn0024811 1520.34 187.5933333 288.2066667 0.060183906 0.487757205 0.317480512 1 1 1 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 4 212980 212986 + 4_212980_212986_+ 0.521220524 0.521148692 0.521184608 5.08E-05 Crk FBtr0304871|FBtr0345065|FBtr0345064 212179|211892|212726 213165|213165|213165 4 + 212892 213006 3'utr Crk FlyBase G56262.1 TAAAACAAACATTAATGGGCAATGGGAGGGAGAATTAAATGGAAAAAATGGTCATTTTCCCTTCACGCACGTTGAATTTGTCGATGATTGTGATTTAAGCAAAAACTCCACAGAA 117 212980 0.952349745 11 109 972 0.944827586 1.291622527 0.379310345 0.179487179 0.337931034 117 2 6 137 4:212892-213006 7 Crk FBtr0304871|FBtr0345065|FBtr0345064 212179|211892|212726 213165|213165|213165 TGTGATT 7mer-m1 dme-miR-308-3p 4 + 212938 213102 stop_codon Crk FlyBase G42477.1 AATGGTCATTTTCCCTTCACGCACGTTGAATTTGTCGATGATTGTGATTTAAGCAAAAACTCCACAGAAATATGCTAAATAGGAAGGAATGGAAGGAATTTCTTTTGATAATTTTGATTTTTGAGCTAATTGTATGATTAATAAGTTGTGCATACCAATTGTTAA 86 212986 0.986669183 16 85 727 0.992248062 2.10720997 0.310077519 0.360465116 0.573643411 86 1 0 128 4:212938-213102 7 86.5 4188 FBgn0024811 1520.34 187.5933333 288.2066667 0.056895168 0.461103806 0.30013185 0 -6 -3 0.1 dme-miR-308-3p 7mer-m1 TGTGATT 4 241000 241006 + 4_241000_241006_+ 0.443130863 0.443130899 0.443130881 0 CG1674 FBtr0089119 240876 241318 4 + 240910 241026 5'utr CG1674 FlyBase G56268.1 ACACTGATTGCAACTTTTAGTACAGTGGTCAAGAAAAATCTCATTAGTCTAACTCTCCACTATAACAGGGATACCCCGTTTCCCATTGTATGTGATTTTTGTTAAAAATTTAAGTTT 46 240996 0.992683486 13 43 501 0.924528302 1.389166084 0.20754717 0.152173913 0.264150943 46 3 1 49 4:240910-241026 7 CG1674 FBtr0089119 240876 241318 TGTGATT 7mer-m1 dme-miR-308-3p 4 + 240974 241015 5'utr CG1674 FlyBase G42483.1 ACAGGGATACCCCGTTTCCCATTGTATGTGATTTTTGTTAAA 25 240996 0.786598585 4 22 313 0.794117647 1.431363764 0.205882353 0.32 0.5 25 7 0 27 4:240974-241015 7 27.5 4189 FBgn0039897 839.9 47.17666667 72.43333333 0.032741993 0.582915283 0.379659457 4 4 4 0.1 dme-bantam-3p 8mer-A1 TGATCTCA 4 280187 280194 - 4_280187_280194_- 0.63001932 0.630565219 0.630292269 0.00038601 Syt7 FBtr0089134 278683 280425 4 - 280152 280210 3'utr Syt7 FlyBase G56793.1 AAACATTGGCAGGACATGATCTCAAAGCCCAGACAAACTGTAGTACAATGGCATCGCTT 6 280194 0.899832612 3 6 26 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 4:280152-280210 8 Syt7 FBtr0089134 278683 280425 TGATCTCA 8mer-A1 dme-bantam-3p 4 - 280151 280210 3'utr Syt7 FlyBase G42902.1 AAACATTGGCAGGACATGATCTCAAAGCCCAGACAAACTGTAGTACAATGGCATCGCTTA 9 280194 0.942961179 4 9 40 1 1.041392685 0 0.111111111 0.272727273 9 0 0 11 4:280151-280210 8 5.5 4190 FBgn0039900 11 0.483333333 0.74 0.5 11.37931034 7.432432432 0 0 0 0.1 dme-miR-252-5p 6mer3-8 GTACTT 4 310320 310325 + 4_310320_310325_+ 1 1 1 0 Rad23 FBtr0333679 310188 310822 4 + 310206 310340 3'utr Rad23 FlyBase G56282.1 AAGTTATGCAAATAACACCGGAAGCGTTACATTTAAAGTTAGATGTTCTTAAATTAAATGTAAAATGTCGATCATAAAAATTCTTTTATATTCTTTTAATACCGTCGGCGTATTGTACTTGTTATTTGTTAAAAA 38 310319 0.988544205 14 38 337 1 1.662757832 0.130434783 0.131578947 0.282608696 38 0 0 46 4:310206-310340 6 Rad23 FBtr0333679 310188 310822 GTACTT 6mer3-8 dme-miR-252-5p 4 + 310301 310341 3'utr Rad23 FlyBase G42496.1 TTAATACCGTCGGCGTATTGTACTTGTTATTTGTTAAAAAT 15 310319 0.735361194 6 12 167 0.866666667 0.937852093 0.033333333 0.733333333 0.866666667 15 2 2 26 4:310301-310341 6 19.5 4191 FBgn0026777 1534.613333 122.59 187.9666667 0.012706784 0.159066808 0.103741798 1 1 1 0.1 dme-miR-7-5p 6mer3-8 GTCTTC 4 310403 310408 + 4_310403_310408_+ 0.999999117 0.999999784 0.99999945 4.95E-07 Rad23 FBtr0333679 310188 310822 4 + 310361 310454 3'utr Rad23 FlyBase G56283.1 GAGTTACGATGTCATTTTTACTAAATATTTCACCACGACATTGTCTTCAGCATAAGACTGCAAATGTCTACAAATTTATCTGTGCCAATCCATG 43 310401 0.978924784 10 43 294 1 1.69019608 0.020408163 0.139534884 0.244897959 43 0 0 49 4:310361-310454 6 Rad23 FBtr0333679 310188 310822 GTCTTC 6mer3-8 dme-miR-7-5p 4 + 310360 310429 3'utr Rad23 FlyBase G42497.1 AGAGTTACGATGTCATTTTTACTAAATATTTCACCACGACATTGTCTTCAGCATAAGACTGCAAATGTCT 40 310401 0.977940811 6 37 248 0.929824561 1.423245874 0.210526316 0.325 0.526315789 40 3 1 53 4:310360-310429 6 38 4192 FBgn0026777 1534.613333 122.59 187.9666667 0.024761938 0.309976344 0.202163504 2 2 2 0.1 dme-miR-304-5p 6mer2-7 GAGATT 4 311138 311143 - 4_311138_311143_- 1 1 1 0 Zip102B FBtr0089133|FBtr0340652|FBtr0340653|FBtr0333681 310928|310928|310928|310928 312789|312789|312789|312789 4 - 311063 311237 3'utr Zip102B FlyBase G56795.1 TAATTCTTGTGTCTTTGAATCTACATTGAGTCAGGAAAGATTTATAATTGTAGCAACATTATAGAGGGGACCATAGCCATACATGAAACTATTAGAGATTTATTAATATTAAAGTGTAGAATTCTTTGCATTAATAATGCATATTACAATGTTCGAGTTTTATATTTGTCGTATT 29 311157 0.989731084 11 23 231 0.84375 1.130333768 0.15625 0.103448276 0.1875 29 4 1 27 4:311063-311237 6 Zip102B FBtr0333681|FBtr0340653|FBtr0340652|FBtr0089133 310928|310928|310928|310928 312789|312789|312789|312789 GAGATT 6mer2-7 dme-miR-304-5p 4 - 311110 311180 3'utr Zip102B FlyBase G42903.1 ATTATAGAGGGGACCATAGCCATACATGAAACTATTAGAGATTTATTAATATTAAAGTGTAGAATTCTTTG 12 311153 0.980001397 8 11 84 0.8125 1.113943352 0.125 0.25 0.4375 12 3 0 13 4:311110-311180 6 9 4193 FBgn0039902 844.14 35.44333333 54.17 0.010661739 0.253926455 0.166143622 14 10 12 0.1 dme-bantam-3p 7mer-m8 TGATCTC 4 311832 311838 - 4_311832_311838_- 0.661615243 0.661615243 0.661615243 0 Zip102B FBtr0089133|FBtr0340652|FBtr0340653|FBtr0333681 310928|310928|310928|310928 312789|312789|312789|312789 4 - 311805 311917 3'utr Zip102B FlyBase G56799.2 GTTTTTGACTATGACGAGTCTGCTGGCGAAATTCGGCGCCGACTTGCGTACTATTCCTTTTCGTTGCCATTCCGAAACCTGATCTCGATTCTCTTCTCCTTGGGCACAATCGA 142 311838 0.854386643 19 128 1086 0.890243902 1.01822482 0.164634146 0.11971831 0.237804878 142 5 13 146 4:311805-311917 7 Zip102B FBtr0333681|FBtr0340653|FBtr0340652|FBtr0089133 310928|310928|310928|310928 312789|312789|312789|312789 TGATCTC 7mer-m8 dme-bantam-3p 4 - 311809 311902 3'utr Zip102B FlyBase G42906.1 GAGTCTGCTGGCGAAATTCGGCGCCGACTTGCGTACTATTCCTTTTCGTTGCCATTCCGAAACCTGATCTCGATTCTCTTCTCCTTGGGCACAA 92 311838 0.98512193 12 85 691 0.907142857 1.404833717 0.114285714 0.391304348 0.6 92 9 4 127 4:311809-311902 7 107.5 4194 FBgn0039902 844.14 35.44333333 54.17 0.127348544 3.033010439 1.984493262 0 0 0 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT 4 312301 312307 - 4_312301_312307_- 0.658385432 0.658502131 0.658443782 8.25E-05 Zip102B FBtr0089133|FBtr0340652|FBtr0340653|FBtr0333681 310928|310928|310928|310928 312789|312789|312789|312789 4 - 312266 312353 3'utr Zip102B FlyBase G56801.1 AGTTTACGTTCTCAGAATGGTAGTAAAAAGTAAGAGACGGTTTAAAGGCAGCTTGGCAATGTCACCATTGGTTTACTGGATAACGTCT 60 312300 0.962742996 10 59 297 0.969230769 1.799340549 0.307692308 0.083333333 0.153846154 60 2 0 63 4:312266-312353 7 Zip102B FBtr0333681|FBtr0340653|FBtr0340652|FBtr0089133 310928|310928|310928|310928 312789|312789|312789|312789 GGCAGCT 7mer-m8 dme-miR-980-3p 4 - 312249 312363 3'utr Zip102B FlyBase G42907.1 AACAATGGATAGTTTACGTTCTCAGAATGGTAGTAAAAAGTAAGAGACGGTTTAAAGGCAGCTTGGCAATGTCACCATTGGTTTACTGGATAACGTCTTCTGTTACGGCCTTAGA 56 312300 0.966890266 9 53 288 0.952380952 1.903089987 0.30952381 0.392857143 0.595238095 56 4 0 80 4:312249-312363 7 51.5 4195 FBgn0039902 844.14 35.44333333 54.17 0.061008837 1.453023606 0.950710725 -7 -7 -7 0.1 dme-miR-1006-3p 7mer-A1 GAATTTA 4 312652 312658 - 4_312652_312658_- 0.823349554 0.823348871 0.823349213 4.95E-07 Zip102B FBtr0089133|FBtr0340652|FBtr0340653|FBtr0333681 310928|310928|310928|310928 312789|312789|312789|312789 4 - 312643 312758 3'utr Zip102B FlyBase G56804.1 AAGATGAAGTAAAAGTTAAGGGATATTAAGCTATAAATATATTGGGTTTAATTTCTCGGATATACAATTATTAACATTAAGTGCTTTGCACAAAGATTTTGAATTTAATGAATTGT 21 312660 0.855593012 12 20 169 0.965517241 1.146128036 0.172413793 0.285714286 0.482758621 21 0 1 28 4:312643-312758 7 Zip102B FBtr0333681|FBtr0340653|FBtr0340652|FBtr0089133 310928|310928|310928|310928 312789|312789|312789|312789 GAATTTA 7mer-A1 dme-miR-1006-3p 4 - 312632 312695 3'utr Zip102B FlyBase G42909.1 ACAATTATTAACATTAAGTGCTTTGCACAAAGATTTTGAATTTAATGAATTGTCGCATGAAAGT 16 312660 0.988502865 8 15 133 0.954545455 1.322219295 0.090909091 0.3125 0.5 16 1 0 21 4:312632-312695 7 10 4196 FBgn0039902 844.14 35.44333333 54.17 0.011846376 0.282140506 0.184604024 2 2 2 0.1 dme-miR-1003-3p 6mer2-7 TGTGAG 4 321250 321255 + 4_321250_321255_+ 0.999938391 0.999958268 0.999948329 1.41E-05 CG32850 FBtr0089123 319798 321385 4 + 321235 321270 5'utr CG32850 FlyBase G56292.1 TTGTAAATTGTGACTTGTGAGCCAACCACATTAGCA 34 321249 0.730188489 6 33 222 0.973684211 1.568201724 0.315789474 0.117647059 0.210526316 34 1 0 37 4:321235-321270 6 CG32850 FBtr0089123 319798 321385 TGTGAG 6mer2-7 dme-miR-1003-3p 4 + 321236 321304 5'utr CG32850 FlyBase G42505.1 TGTAAATTGTGACTTGTGAGCCAACCACATTAGCACTATCAAATTTCCATGTCTCTGCCACTGAGTATA 23 321249 0.750036572 5 22 161 0.956521739 1.643452676 0.347826087 0.695652174 0.847826087 23 2 0 44 4:321236-321304 6 26 4197 FBgn0052850 7774.166667 410.5266667 632.2966667 0.00334441 0.063333279 0.041119938 1 1 1 0.1 dme-miR-1008-3p 8mer-A1 AGCTGTGA 4 329071 329078 - 4_329071_329078_- 0.622087671 0.639202558 0.630645115 0.012102062 PMCA FBtr0304046|FBtr0304049|FBtr0300555|FBtr0300554|FBtr0304047|FBtr0300557|FBtr0300556|FBtr0304048 328814|328814|328814|328814|328814|328814|328814|328191 329206|329206|331564|329206|329206|329206|329206|329206 4 - 329056 329094 3'utr PMCA FlyBase G56818.1 AGGATAACAGCAATGTAGCTGTGAATTGGTTAAAAAGCA 11 329080 0.762025845 4 10 69 1 1.176091259 0.2 0.272727273 0.466666667 11 0 0 15 4:329056-329094 8 PMCA FBtr0304047|FBtr0300554|FBtr0300556|FBtr0300557|FBtr0304048|FBtr0304046|FBtr0304049|FBtr0300555 328814|328814|328814|328814|328191|328814|328814|328814 329206|329206|329206|329206|329206|329206|329206|331564 AGCTGTGA 8mer-A1 dme-miR-1008-3p 4 - 329018 329110 3'utr PMCA FlyBase G42920.1 AAAAAAGGTTTTGTTCAGGATAACAGCAATGTAGCTGTGAATTGGTTAAAAAGCATTTTGTAATTCAGCAAAAATAATCCGTAAAAAAAATGT 11 329080 0.97955405 7 11 72 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 4:329018-329110 8 8.5 4198 FBgn0259214 5766.78 152.7933333 233.7433333 0.001473959 0.055630699 0.036364674 2 2 2 0.1 dme-miR-283-5p 7mer-m1 GATATTT 4 331381 331387 - 4_331381_331387_- 0.761096111 0.732507377 0.746801744 0.020215264 PMCA FBtr0304050|FBtr0300558 329515|330854 331564|331564 4 - 331292 331414 5'utr-coding PMCA FlyBase G56824.1 AGTATGTTAAAACAAAGGTGAATGCGCGATATTTTTTTGATTAAACTTTTAACTCTAAAGAGGCAAACTTAAATTTATTAATCTCATAAATACAAATGTGCATGTATAGTAAGCGATTTCGAA 49 331392 0.98055871 11 48 333 0.964285714 1.73239376 0.053571429 0.102040816 0.214285714 49 2 0 54 4:331292-331414 7 PMCA FBtr0300558|FBtr0304050 330854|329515 331564|331564 GATATTT 7mer-m1 dme-miR-283-5p 4 - 331379 331411 5'utr-coding PMCA FlyBase G42927.1 ATGTTAAAACAAAGGTGAATGCGCGATATTTTT 11 331392 0.885049824 3 11 54 1 1.176091259 0.066666667 0.272727273 0.466666667 11 0 0 15 4:331379-331411 7 22 4199 FBgn0259214 5766.78 152.7933333 233.7433333 0.003814954 0.14398534 0.094120331 5 5 5 0.1 dme-miR-14-3p 6mer2-7 AGACTG 4 331503 331508 - 4_331503_331508_- 0.999968511 0.9999528 0.999960656 1.11E-05 PMCA FBtr0300555|FBtr0304050|FBtr0300558 328814|329515|330854 331564|331564|331564 4 - 331448 331535 5'utr PMCA FlyBase G56825.1 TGGTTAAGCCTATAACAATTCCAAATTAGACTGGTTATGCTTCTCAAAGCGCAATCCCAAATCAATGGCCCAGCTCAATGTGGCTATT 446 331510 0.911479992 14 436 3056 0.978873239 2.1430148 0.001760563 0.210762332 0.38028169 446 9 3 556 4:331448-331535 6 PMCA FBtr0300558|FBtr0300555|FBtr0304050 330854|328814|329515 331564|331564|331564 AGACTG 6mer2-7 dme-miR-14-3p 4 - 331461 331609 stop_codon PMCA FlyBase G42928.1 ATCGAAACTAAACATTCCAATGGACAGAATGAGACTCGAATTTAAATGGTTTTAGTGGGTGTTTGCACCAAATATGGTTAAGCCTATAACAATTCCAAATTAGACTGGTTATGCTTCTCAAAGCGCAATCCCAAATCAATGGCCCAGCT 379 331510 0.972817175 14 369 2212 0.980506823 2.099507994 0.097465887 0.295514512 0.479532164 379 7 3 503 4:331461-331609 6 351 4200 FBgn0259214 5766.78 152.7933333 233.7433333 0.060865856 2.297220647 1.501647106 2 2 2 0.1 dme-miR-965-3p 6mer3-8 TACGCT 4 372497 372502 + 4_372497_372502_+ 1 0.999998097 0.999999048 1.34E-06 Hcf FBtr0334479|FBtr0345284|FBtr0089126|FBtr0089125|FBtr0307379 372391|372391|372391|372391|372391 372784|375554|372784|374973|372784 4 + 372451 372540 3'utr Hcf FlyBase G56327.1 AAAGTATGCTATTAGCTTTTCCGTTTTTACAGCTTCCAATAGACTTTACGCTGAATTCAAAATGATTACAACGAAACTTGAATATTATTG 56 372490 0.794175169 8 55 386 0.98630137 1.857332496 0.150684932 0.196428571 0.383561644 56 1 0 72 4:372451-372540 6 Hcf FBtr0089125|FBtr0307379|FBtr0345284|FBtr0089126|FBtr0334479 372391|372391|372391|372391|372391 374973|372784|375554|372784|372784 TACGCT 6mer3-8 dme-miR-965-3p 4 + 372476 372547 3'utr Hcf FlyBase G42525.1 TTTACAGCTTCCAATAGACTTTACGCTGAATTCAAAATGATTACAACGAAACTTGAATATTATTGCTATTAA 30 372491 0.980375031 7 28 199 0.956521739 1.643452676 0.152173913 0.333333333 0.565217391 30 2 0 44 4:372476-372547 6 38 4201 FBgn0039904 2694.423333 58.45333333 89.53333333 0.014103203 0.650091241 0.424422934 7 6 6.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 4 372718 372723 + 4_372718_372723_+ 0.999999989 0.999999998 0.999999994 0 Hcf FBtr0334479|FBtr0345284|FBtr0089126|FBtr0089125|FBtr0307379 372391|372391|372391|372391|372391 372784|375554|372784|374973|372784 4 + 372677 372729 3'utr Hcf FlyBase G56329.1 AATAATATATAATATTTTCCTTATCATGAACTCTACAACACTCTAGTGTATAT 12 372704 0.984352927 6 10 84 0.9375 0.875061263 0 0.166666667 0.375 12 0 1 15 4:372677-372729 6 Hcf FBtr0089125|FBtr0307379|FBtr0345284|FBtr0089126|FBtr0334479 372391|372391|372391|372391|372391 374973|372784|375554|372784|372784 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 4 + 372687 372727 3'utr Hcf FlyBase G42527.1 AATATTTTCCTTATCATGAACTCTACAACACTCTAGTGTAT 5 372697 0.982720845 4 4 30 1 0.903089987 0 0.4 0.625 5 0 0 8 4:372687-372727 6 4.5 4202 FBgn0039904 2694.423333 58.45333333 89.53333333 0.001670116 0.076984489 0.050260611 14 21 17.5 0.1 dme-miR-283-5p 6mer3-8 TGATAT 4 437024 437029 - 4_437024_437029_- 1 0.963159448 0.981579724 0.026050238 lgs FBtr0089111 436955 437385 4 - 436992 437046 3'utr lgs FlyBase G56864.1 TAAATGTAAAACGCTATTGATATATATTGCTCTCAACTGTATTGTAATCAATATT 10 437020 0.931312199 7 10 85 1 1.041392685 0.545454545 0.1 0.181818182 10 0 0 11 4:436992-437046 6 lgs FBtr0089111 436955 437385 TGATAT 6mer3-8 dme-miR-283-5p 4 - 436977 437031 3'utr lgs FlyBase G42952.1 ATTGATATATATTGCTCTCAACTGTATTGTAATCAATATTAAGAGAACTGTAAAT 6 437020 0.987856513 5 6 44 1 1 0.2 0.5 0.7 6 0 0 10 4:436977-437031 6 6 4203 FBgn0039907 1610.766667 36.50666667 56.17666667 0.003724934 0.164353543 0.10680591 -9 -9 -9 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 4 437069 437074 - 4_437069_437074_- 0.999999139 0.9999952 0.99999717 2.76E-06 lgs FBtr0089111 436955 437385 4 - 437049 437096 3'utr lgs FlyBase G56865.1 TTAATATGTGCGCTGCTCTCTCTGTGTTAAATGAAATTAAAATATATA 111 437076 0.982241423 10 106 967 0.95035461 1.649983544 0.517730496 0.216216216 0.382978723 111 5 2 134 4:437049-437096 6 lgs FBtr0089111 436955 437385 TGTGTT 6mer3-8 dme-miR-317-3p 4 - 437056 437094 3'utr lgs FlyBase G42953.1 AATATGTGCGCTGCTCTCTCTGTGTTAAATGAAATTAAA 77 437076 0.738180252 6 69 679 0.900826446 2.037426498 0.52892562 0.402597403 0.619834711 77 12 0 109 4:437056-437094 6 94 4204 FBgn0039907 1610.766667 36.50666667 56.17666667 0.058357304 2.574872169 1.673292589 2 2 2 0.1 dme-miR-252-5p 7mer-m1 TACTTAG 4 437288 437294 - 4_437288_437294_- 0.702429184 0.702760391 0.702594788 0.000234194 lgs FBtr0089111 436955 437385 4 - 437225 437302 3'utr lgs FlyBase G56867.1 AGCTTATTTACTTAGGTGTTTTTACAACGGAGAAAATAAACTTTTGGATATGCAAATGATAACGTTGGAAACAACATA 10 437291 0.984303858 4 10 81 1 1.079181246 0.333333333 0.2 0.333333333 10 0 0 12 4:437225-437302 7 lgs FBtr0089111 436955 437385 TACTTAG 7mer-m1 dme-miR-252-5p 4 - 437227 437306 3'utr lgs FlyBase G42954.1 TTGAAGCTTATTTACTTAGGTGTTTTTACAACGGAGAAAATAAACTTTTGGATATGCAAATGATAACGTTGGAAACAACA 16 437291 0.985303602 5 16 133 1 1.301029996 0.3 0.25 0.4 16 0 0 20 4:437227-437306 7 8.5 4205 FBgn0039907 1610.766667 36.50666667 56.17666667 0.00527699 0.232834186 0.151308372 -3 -3 -3 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 4 453270 453276 + 4_453270_453276_+ 0.661494629 0.659795455 0.660645042 0.001201445 CaMKI FBtr0089067|FBtr0333670|FBtr0089069|FBtr0089063|FBtr0089065 453198|453198|453198|453198|453198 453947|453947|453947|453947|453947 4 + 453246 453349 3'utr CaMKI FlyBase G56343.1 ACATTTTTGAATTTTAACAATTGTTCTAGTCTAGTAAATATCTCGTACTAACGAATCCGATATAATTTCTCAATCGAAAATGCCAATCAAATAACATATAATGT 32 453268 0.98966367 8 30 286 0.952380952 1.602059991 0.119047619 0.1875 0.380952381 32 2 0 40 4:453246-453349 7 CaMKI FBtr0089065|FBtr0089063|FBtr0089069|FBtr0333670|FBtr0089067 453198|453198|453198|453198|453198 453947|453947|453947|453947|453947 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 4 + 453254 453284 3'utr CaMKI FlyBase G42538.1 GAATTTTAACAATTGTTCTAGTCTAGTAAAT 9 453269 0.611747169 5 7 75 0.75 1.079181246 0.4375 0.444444444 0.6875 9 4 0 12 4:453254-453284 7 18 4206 FBgn0016126 937.6466667 46.26 70.96333333 0.019196997 0.389105058 0.253652121 2 1 1.5 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 4 453799 453804 + 4_453799_453804_+ 0.99187335 0.998883703 0.995378527 0.004957031 CaMKI FBtr0089067|FBtr0333670|FBtr0089069|FBtr0089063|FBtr0089065 453198|453198|453198|453198|453198 453947|453947|453947|453947|453947 4 + 453778 453827 3'utr CaMKI FlyBase G56346.1 TCTTAAGCAGATGATTTGGTGTTGACTGGAAATTTTTAGTATTAAGATGT 13 453799 0.963684023 8 9 124 0.75 0.602059991 0.25 0.153846154 0.3125 13 2 2 12 4:453778-453827 6 CaMKI FBtr0089065|FBtr0089063|FBtr0089069|FBtr0333670|FBtr0089067 453198|453198|453198|453198|453198 453947|453947|453947|453947|453947 TTGACT 6mer3-8 dme-miR-1012-3p 4 + 453782 453826 3'utr CaMKI FlyBase G42539.1 AAGCAGATGATTTGGTGTTGACTGGAAATTTTTAGTATTAAGATG 10 453797 0.643485661 7 9 99 0.944444444 1.230448921 0.388888889 0.5 0.722222222 10 1 0 17 4:453782-453826 6 10 4207 FBgn0016126 937.6466667 46.26 70.96333333 0.010664998 0.216169477 0.140917845 0 2 1 0.1 dme-bantam-3p 7mer-m8 TGATCTC 4 453914 453920 + 4_453914_453920_+ 0.660293754 0.659765423 0.660029588 0.000373635 CaMKI FBtr0089067|FBtr0333670|FBtr0089069|FBtr0089063|FBtr0089065 453198|453198|453198|453198|453198 453947|453947|453947|453947|453947 4 + 453875 453930 3'utr CaMKI FlyBase G56347.1 CTTTCTTGTAACAAATATATATATTAAACATCCCAAGCGTGATCTCCCCAAAGATT 32 453914 0.946817697 3 30 129 0.88372093 1.579783597 0.023255814 0.25 0.441860465 32 5 0 38 4:453875-453930 7 CaMKI FBtr0089065|FBtr0089063|FBtr0089069|FBtr0333670|FBtr0089067 453198|453198|453198|453198|453198 453947|453947|453947|453947|453947 TGATCTC 7mer-m8 dme-bantam-3p 4 + 453888 453934 3'utr CaMKI FlyBase G42540.1 AATATATATATTAAACATCCCAAGCGTGATCTCCCCAAAGATTATGT 24 453914 0.922171525 3 23 88 0.911764706 0.889301703 0.058823529 0.291666667 0.5 24 0 3 31 4:453888-453934 7 27 4208 FBgn0016126 937.6466667 46.26 70.96333333 0.028795495 0.583657588 0.380478181 0 0 0 0.1 dme-miR-980-3p 6mer3-8 GGCAGC 4 471331 471336 - 4_471331_471336_- 0.999999934 0.999999987 0.99999996 7.07E-08 Asator FBtr0332906|FBtr0300344|FBtr0332905|FBtr0300342 469407|471284|471284|471284 472288|474884|472288|472288 4 - 471315 471354 3'utr Asator FlyBase G56907.1 ATTTAAAAATAAAGCGTTGGCAGCGATTGTTCTTAAAAAC 8 471337 0.794746052 3 8 51 1 0.954242509 0 0.125 0.222222222 8 0 0 9 4:471315-471354 6 Asator FBtr0332905|FBtr0300342|FBtr0332906|FBtr0300344 471284|471284|469407|471284 472288|472288|472288|474884 GGCAGC 6mer3-8 dme-miR-980-3p 4 - 471313 471346 3'utr Asator FlyBase G42985.1 ATAAAGCGTTGGCAGCGATTGTTCTTAAAAACAA 5 471337 0.950841207 3 5 28 1 0.903089987 0 0.4 0.625 5 0 0 8 4:471313-471346 6 6.5 4209 FBgn0039908 319.3933333 7.256666667 11.06333333 0.020351082 0.895728066 0.587526363 1 1 1 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 4 471683 471690 - 4_471683_471690_- 0.500120023 0.50011912 0.500119572 6.36E-07 Asator FBtr0332906|FBtr0300344|FBtr0332905|FBtr0300342 469407|471284|471284|471284 472288|474884|472288|472288 4 - 471673 471716 3'utr Asator FlyBase G56909.1 AAAGTCATGGATTATGACACATTGCTGTACTTAACTACATTTTT 30 471691 0.736390248 6 29 224 0.942857143 1.51851394 0.114285714 0.133333333 0.257142857 30 2 0 33 4:471673-471716 8 Asator FBtr0332905|FBtr0300342|FBtr0332906|FBtr0300344 471284|471284|469407|471284 472288|472288|472288|474884 GTACTTAA 8mer-A1 dme-miR-252-5p 4 - 471679 471714 3'utr Asator FlyBase G42987.1 AGTCATGGATTATGACACATTGCTGTACTTAACTAC 35 471691 0.747449474 4 32 276 0.909090909 1.22184875 0.072727273 0.342857143 0.581818182 35 3 2 50 4:471679-471714 8 31.5 4210 FBgn0039908 319.3933333 7.256666667 11.06333333 0.098624476 4.340836013 2.847243146 1 1 1 0.1 dme-bantam-3p 6mer3-8 TGATCT 4 537796 537801 + 4_537796_537801_+ 0.940893669 0.934037903 0.937465786 0.004847783 zfh2 FBtr0332913 536964 538373 4 + 537754 537819 3'utr zfh2 FlyBase G56438.1 ATCACCGGTAAGAGTTTCGGGAAGATACAAAAATCATCTACTTGATCTTATCTGTTGGTCAGATTA 31 537795 0.794894459 10 30 275 0.971428571 1.531478917 0.571428571 0.129032258 0.228571429 31 1 0 34 4:537754-537819 6 zfh2 FBtr0332913 536964 538373 TGATCT 6mer3-8 dme-bantam-3p 4 + 537768 537821 3'utr zfh2 FlyBase G42615.1 TTTCGGGAAGATACAAAAATCATCTACTTGATCTTATCTGTTGGTCAGATTAAA 19 537796 0.993000632 5 16 192 0.833333333 1.397940009 0.4 0.526315789 0.7 19 5 0 25 4:537768-537821 6 22 4211 FBgn0004607 3.003333333 0.04 0.056666667 7.325194229 550 388.2352941 1 0 0.5 0.1 dme-miR-1003-3p 6mer2-7 TGTGAG 4 538090 538095 + 4_538090_538095_+ 0.999992756 0.681441151 0.840716953 0.225249997 zfh2 FBtr0332913 536964 538373 4 + 538005 538147 3'utr zfh2 FlyBase G56440.1 AACTACAATAATATGTGTAAGCAAATATTGTATACCTGCGTGTGAAAAACTAAACAAGTAGAATAAGAGAACAAGTTACTCTTAGTGTGAGGGCTTTTAAAGTAAGTTCAGGAAAATGTCACTTTAAGTGCCGAGAAAACACC 58 538080 0.981252998 18 53 384 0.92 1.139879086 0.4 0.224137931 0.4 58 2 4 69 4:538005-538147 6 zfh2 FBtr0332913 536964 538373 TGTGAG 6mer2-7 dme-miR-1003-3p 4 + 538060 538180 3'utr zfh2 FlyBase G42616.3 AAGTAGAATAAGAGAACAAGTTACTCTTAGTGTGAGGGCTTTTAAAGTAAGTTCAGGAAAATGTCACTTTAAGTGCCGAGAAAACACCACATGCTAAAAGTACCCTACCTATTCCGAAGCG 31 538080 0.985342302 9 29 177 0.976744186 1.62324929 0.511627907 0.35483871 0.534883721 31 1 0 42 4:538060-538180 6 25.5 4212 FBgn0004607 3.003333333 0.04 0.056666667 8.490566038 637.5 450 10 10 10 0.1 dme-miR-276a-3p 7mer-A1 GTTCCTA 4 538876 538882 + 4_538876_538882_+ 0.755642615 0.782860901 0.769251758 0.019246245 zfh2 FBtr0307167|FBtr0089070 538553|538553 540874|539792 4 + 538832 539197 3'utr zfh2 FlyBase G56444.1 AACCTATTCCAACATTAGTAAGAATCTCTAAATTAAACGGAAGTGTTCCTAACTATTCGAAATATAAATTAGCAATAAACTTAAGGTATACACACTTGAGGCAATCCTTAACAATTCAAGATGGAGGGCGTTATCATGATAAGTTAAAATAACAAGTCGCTCCAAACAAAAATATGATATCATATAGATACATATATAATGAACTAGATTTAGTGAAATGTAAACTGAGTTCCTAGCATTTGATTGCTTTTGCCTTTGTTTTTATATTAGAATGTAGCCAATGAATACTAAGATCTGCTTCAGTATGCCGAATATAAAAGCTGAAATATATACATACGTGGTTCCTATTTTATTTAGAAACACTGT 507 538875 0.946271834 53 497 3521 0.982113821 2.303915684 0.045528455 0.169625247 0.315447154 507 9 2 604 4:538832-539197 7 zfh2 FBtr0307167|FBtr0089070 538553|538553 540874|539792 GTTCCTA 7mer-A1 dme-miR-276a-3p 4 + 538827 538902 3'utr zfh2 FlyBase G42622.1 GCGAAAACCTATTCCAACATTAGTAAGAATCTCTAAATTAAACGGAAGTGTTCCTAACTATTCGAAATATAAATTA 129 538875 0.976065097 6 128 822 0.994897959 2.290034611 0.005102041 0.356589147 0.576530612 129 1 0 195 4:538827-538902 7 206 4213 FBgn0004607 3.003333333 0.04 0.056666667 68.59045505 5150 3635.294118 1 1 1 0.1 dme-miR-970-3p 7mer-m8 TCTTATG 4 539232 539238 + 4_539232_539238_+ 0.658997982 0.658978398 0.65898819 1.39E-05 zfh2 FBtr0307167|FBtr0089070 538553|538553 540874|539792 4 + 539221 539276 3'utr zfh2 FlyBase G56445.1 ATTTACGTCATTCTTATGGTGAGAGAATCGTGCCAATAATTTGTTCTGCAGAAAAT 20 539231 0.741441974 6 19 149 1 1.361727836 0.391304348 0.15 0.260869565 20 0 0 23 4:539221-539276 7 zfh2 FBtr0307167|FBtr0089070 538553|538553 540874|539792 TCTTATG 7mer-m8 dme-miR-970-3p 4 + 539221 539272 3'utr zfh2 FlyBase G42625.1 ATTTACGTCATTCTTATGGTGAGAGAATCGTGCCAATAATTTGTTCTGCAGA 6 539231 0.986592928 5 6 48 1 0.903089987 0.5 0.166666667 0.375 6 0 0 8 4:539221-539272 7 11 4214 FBgn0004607 3.003333333 0.04 0.056666667 3.662597114 275 194.1176471 1 1 1 0.1 dme-miR-13b-2-5p 6mer3-8 TTTGAC 4 539704 539709 + 4_539704_539709_+ 0.980129792 0.97305147 0.976590631 0.005005114 zfh2 FBtr0307167|FBtr0089070 538553|538553 540874|539792 4 + 539687 539733 3'utr zfh2 FlyBase G56447.1 TTTAAAAGAAAATAATATTTGACTGAAAATTAAAATATAAAAAAATT 89 539704 0.686349165 6 82 640 0.927272727 1.707570176 0 0.213483146 0.363636364 89 7 1 102 4:539687-539733 6 zfh2 FBtr0307167|FBtr0089070 538553|538553 540874|539792 TTTGAC 6mer3-8 dme-miR-13b-2-5p 4 + 539689 539736 3'utr zfh2 FlyBase G42627.1 TAAAAGAAAATAATATTTGACTGAAAATTAAAATATAAAAAAATTAAA 44 539704 0.660890058 7 42 323 0.936507937 1.293730757 0 0.318181818 0.523809524 44 2 2 59 4:539689-539736 6 66.5 4215 FBgn0004607 3.003333333 0.04 0.056666667 22.14206437 1662.5 1173.529412 0 0 0 0.1 dme-miR-276a-3p 8mer-A1 AGTTCCTA 4 539872 539879 + 4_539872_539879_+ 0.635133679 0.539536251 0.587334965 0.06759757 zfh2 FBtr0307167 538553 540874 4 + 539857 539918 3'utr zfh2 FlyBase G56448.1 AAGAATCTACTAAGAAGTTCCTATAGAATTTAATAAAAAGATATACAAATATATTTACGTGT 41 539863 0.8646097 9 24 357 0.565217391 0.812913357 0.065217391 0.12195122 0.217391304 41 17 3 26 4:539857-539918 8 zfh2 FBtr0307167 538553 540874 AGTTCCTA 8mer-A1 dme-miR-276a-3p 4 + 539858 539897 3'utr zfh2 FlyBase G42629.1 AGAATCTACTAAGAAGTTCCTATAGAATTTAATAAAAAGA 20 539864 0.804114552 8 17 157 0.88 0.865301426 0 0.2 0.36 20 1 2 22 4:539858-539897 8 29 4216 FBgn0004607 3.003333333 0.04 0.056666667 9.655937847 725 511.7647059 9 8 8.5 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 4 540045 540052 + 4_540045_540052_+ 0.500114912 0.500110841 0.500112877 2.90E-06 zfh2 FBtr0307167 538553 540874 4 + 539988 540099 3'utr zfh2 FlyBase G56449.1 TGTAGAAATAATGTCATATATAAATATGTGAATGTTTGAAATCCCATTTAAATACATGTACTTAAGCCTTCACAATTGCCAACAAACACAGATATGGACAGAATACCATACT 64 540044 0.921574665 9 62 441 0.974025974 1.875061263 0.090909091 0.171875 0.311688312 64 2 0 75 4:539988-540099 8 zfh2 FBtr0307167 538553 540874 GTACTTAA 8mer-A1 dme-miR-252-5p 4 + 540027 540092 3'utr zfh2 FlyBase G42632.1 AATCCCATTTAAATACATGTACTTAAGCCTTCACAATTGCCAACAAACACAGATATGGACAGAATA 40 540044 0.890217003 5 38 232 0.920634921 1.161368002 0.015873016 0.4 0.619047619 40 2 3 58 4:540027-540092 8 42 4217 FBgn0004607 3.003333333 0.04 0.056666667 13.98446171 1050 741.1764706 1 1 1 0.1 dme-miR-184-3p 7mer-m8 TCCGTCC 4 542001 542007 - 4_542001_542007_- 0.661613863 0.661613792 0.661613827 7.07E-08 Thd1 FBtr0345197|FBtr0333706 538330|540558 545662|545662 4 - 541984 542027 3'utr Thd1 FlyBase G56931.1 ATCGAGTCGAACTGGCCATTTCCGTCCGTCTGAGGGCTCATCTT 36 542008 0.753355223 4 35 258 0.976190476 1.612783857 0.238095238 0.166666667 0.285714286 36 1 0 41 4:541984-542027 7 Thd1 FBtr0333706|FBtr0345197 540558|538330 545662|545662 TCCGTCC 7mer-m8 dme-miR-184-3p 4 - 541984 542025 3'utr Thd1 FlyBase G42999.1 CGAGTCGAACTGGCCATTTCCGTCCGTCTGAGGGCTCATCTT 22 542008 0.762194712 3 22 158 1 1.477121255 0.233333333 0.318181818 0.5 22 0 0 30 4:541984-542025 7 29 4218 FBgn0026869 3486.926667 66.67 102.3333333 0.008316779 0.434978251 0.283387622 1 1 1 0.1 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 4 544258 544264 - 4_544258_544264_- 0.823273039 0.823346634 0.823309837 5.20E-05 Thd1 FBtr0345197|FBtr0333706 538330|540558 545662|545662 4 - 544236 544281 3'utr Thd1 FlyBase G56935.1 TTCAAATGCGTTTAGGTTACCTGAGCGTGTGAGTGTAATTTTTCTT 8 544265 0.974925753 2 8 71 1 1 0.4 0.25 0.4 8 0 0 10 4:544236-544281 7 Thd1 FBtr0333706|FBtr0345197 540558|538330 545662|545662 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 4 - 544227 544287 3'utr Thd1 FlyBase G43002.1 ACAAATTTCAAATGCGTTTAGGTTACCTGAGCGTGTGAGTGTAATTTTTCTTAATATCAAT 9 544265 0.989986283 6 8 77 0.9375 1.176091259 0.1875 0.444444444 0.6875 9 1 0 15 4:544227-544287 7 8 4219 FBgn0026869 3486.926667 66.67 102.3333333 0.002294284 0.119994 0.078175896 1 1 1 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA 4 545346 545353 - 4_545346_545353_- 0.500120277 0.500120191 0.500120234 7.07E-08 Thd1 FBtr0345197|FBtr0089106|FBtr0333706 538330|545266|540558 545662|545662|545662 4 - 545333 545368 3'utr Thd1 FlyBase G56939.2 CCGAAACAATTGTTTGTACTTAAATCATTTAAGCAT 53 545354 0.697814862 4 48 487 0.938461538 1.785329835 0.076923077 0.188679245 0.338461538 53 4 0 61 4:545333-545368 8 Thd1 FBtr0333706|FBtr0345197 540558|538330 545662|545662 GTACTTAA 8mer-A1 dme-miR-252-5p 4 - 545266 545372 3'utr Thd1 FlyBase G43004.1 GATCCCGAAACAATTGTTTGTACTTAAATCATTTAAGCATACTTTATTTTACTCACACACAAATATTGCGAAACTTACTAGTATATAATAAAGTTTTAAAATAATAA 41 545354 0.978728484 10 38 385 0.927272727 1.40654018 0.163636364 0.268292683 0.454545455 41 3 1 51 4:545266-545372 8 41.5 4220 FBgn0026869 3486.926667 66.67 102.3333333 0.011901598 0.622468877 0.405537459 1 1 1 0.1 dme-miR-2535b-3p 6mer3-8 CCGTGA 4 565765 565770 + 4_565765_565770_+ 0.999989135 0.999810184 0.999899659 0.000126501 Pur-alpha FBtr0310640|FBtr0089995|FBtr0089994|FBtr0310639|FBtr0089993|FBtr0310638|FBtr0089996 565755|565755|565755|565755|565755|565755|565755 567257|565931|565931|565931|567257|567257|565931 4 + 565741 565795 stop_codon Pur-alpha FlyBase G56460.2 AAATAGTCTTAAATAAACAACATACCGTGATTTACTAAGTTATATAAGAAGGCGC 93 565772 0.650600224 7 92 544 0.991304348 2.056904851 0 0.204301075 0.356521739 93 1 0 114 4:565741-565795 6 Pur-alpha FBtr0310639|FBtr0089994|FBtr0089995|FBtr0310640|FBtr0089996|FBtr0310638|FBtr0089993 565755|565755|565755|565755|565755|565755|565755 565931|565931|565931|567257|565931|567257|567257 CCGTGA 6mer3-8 dme-miR-2535b-3p 4 + 565683 565789 stop_codon Pur-alpha FlyBase G42638.1 AGAAAATGAAAAAATCGTCCGACTCAATTACTGCCGAAATTAACTTACCTACATCTTCAAATAGTCTTAAATAAACAACATACCGTGATTTACTAAGTTATATAAGA 93 565772 0.916697773 11 90 496 0.972972973 1.857332496 0.027027027 0.451612903 0.655405405 93 3 1 144 4:565683-565789 6 82 4221 FBgn0022361 255.0033333 15.47333333 23.55666667 0.321564424 5.299439897 3.480967879 -7 -7 -7 0.1 dme-miR-79-3p 6mer3-8 TAGCTT 4 566046 566051 + 4_566046_566051_+ 0.997156135 0.993101804 0.995128969 0.002866823 Pur-alpha FBtr0310640|FBtr0089993|FBtr0310638 565755|565755|565755 567257|567257|567257 4 + 565990 566065 3'utr Pur-alpha FlyBase G56462.1 AAATTAACTCTTAAAATCCATTTTGAACTCTAAATGTCCTTTTTTGGCTGGCTGTTTAGCTTCTACTTAGTGCAAG 98 566038 0.8410059 12 96 1031 0.982905983 2.06069784 0.094017094 0.183673469 0.316239316 98 2 0 115 4:565990-566065 6 Pur-alpha FBtr0310640|FBtr0310638|FBtr0089993 565755|565755|565755 567257|567257|567257 TAGCTT 6mer3-8 dme-miR-79-3p 4 + 565995 566070 3'utr Pur-alpha FlyBase G42640.1 AACTCTTAAAATCCATTTTGAACTCTAAATGTCCTTTTTTGGCTGGCTGTTTAGCTTCTACTTAGTGCAAGAAAAT 58 566038 0.825748127 14 55 566 0.964705882 1.612783857 0.164705882 0.310344828 0.529411765 58 2 1 82 4:565995-566070 6 59.5 4222 FBgn0022361 255.0033333 15.47333333 23.55666667 0.233330283 3.845325291 2.525824254 8 8 8 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 4 566727 566732 + 4_566727_566732_+ 0.730949445 0.730949445 0.730949445 0 Pur-alpha FBtr0310640|FBtr0310640|FBtr0310640|FBtr0089993|FBtr0089993|FBtr0089993|FBtr0310638|FBtr0310638|FBtr0310638 565755|565755|565755|565755|565755|565755|565755|565755|565755 567257|567257|567257|567257|567257|567257|567257|567257|567257 4 + 566697 566788 3'utr Pur-alpha FlyBase G56466.1 CCTAAACTCGTTTTTAAAACAAAAGTTTCATGTGATCACGTAGAATAAAAACTTACTAAGTACGATGAACATGCATAGCAAAATAACAACAT 166 566724 0.92125605 13 145 1139 0.875 1.604765885 0.130434783 0.096385542 0.184782609 166 20 3 161 4:566697-566788 6 Pur-alpha FBtr0310640|FBtr0310640|FBtr0310640|FBtr0310638|FBtr0310638|FBtr0310638|FBtr0089993|FBtr0089993|FBtr0089993 565755|565755|565755|565755|565755|565755|565755|565755|565755 567257|567257|567257|567257|567257|567257|567257|567257|567257 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 4 + 566700 566766 3'utr Pur-alpha FlyBase G42642.1 AAACTCGTTTTTAAAACAAAAGTTTCATGTGATCACGTAGAATAAAAACTTACTAAGTACGATGAAC 99 566724 0.98569285 7 79 673 0.817567568 1.605664116 0.101351351 0.333333333 0.554054054 99 25 2 121 4:566700-566766 6 124.5 4223 FBgn0022361 255.0033333 15.47333333 23.55666667 0.488228912 8.046100819 5.28512806 3 3 3 0.1 dme-miR-1006-3p 6mer2-7 GAATTT 4 566909 566914 + 4_566909_566914_+ 0.999102852 0.999999229 0.99955104 0.00063378 Pur-alpha FBtr0310640|FBtr0089993|FBtr0310638 565755|565755|565755 567257|567257|567257 4 + 566864 566931 3'utr Pur-alpha FlyBase G56467.1 AGTAATAAATTAGCTGTACTAATTATTAAGTATTGAAATTTATCAGAATTTGGGTTCAATAAAGAGAG 6 566913 0.978086135 2 6 48 1 0.77815125 0.5 0 0 6 0 0 6 4:566864-566931 6 Pur-alpha FBtr0310640|FBtr0310638|FBtr0089993 565755|565755|565755 567257|567257|567257 GAATTT 6mer2-7 dme-miR-1006-3p 4 + 566896 566932 3'utr Pur-alpha FlyBase G42643.1 TTGAAATTTATCAGAATTTGGGTTCAATAAAGAGAGA 5 566917 0.970693568 2 5 34 1 0.903089987 0.125 0.4 0.625 5 0 0 8 4:566896-566932 6 5 4224 FBgn0022361 255.0033333 15.47333333 23.55666667 0.019607587 0.323136579 0.212254139 -4 -8 -6 0.1 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 4 577873 577879 + 4_577873_577879_+ 0.823349562 0.823349424 0.823349493 1.41E-07 Ephrin FBtr0089076|FBtr0089077|FBtr0089075 577321|577321|577321 578143|580122|578143 4 + 577861 577903 3'utr Ephrin FlyBase G56490.1 CAGCTATATTTTTACCTGACTTCGCGTCTATTAGCTAAAATGA 8 577871 0.868935113 4 6 55 0.777777778 0.84509804 0.222222222 0.125 0.222222222 8 2 0 7 4:577861-577903 7 Ephrin FBtr0089077|FBtr0089075|FBtr0089076 577321|577321|577321 580122|578143|578143 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 4 + 577860 577890 3'utr Ephrin FlyBase G42658.1 ACAGCTATATTTTTACCTGACTTCGCGTCTA 7 577871 0.675684281 2 7 63 1 1.146128036 0 0.714285714 0.857142857 7 0 0 14 4:577860-577890 7 6.5 4225 FBgn0040324 1976.393333 63.49666667 97.38666667 0.003288819 0.102367578 0.06674425 2 2 2 0.1 dme-miR-283-5p 7mer-m1 GATATTT 4 578069 578075 + 4_578069_578075_+ 0.758213761 0.762472299 0.76034303 0.003011214 Ephrin FBtr0089076|FBtr0089077|FBtr0089075 577321|577321|577321 578143|580122|578143 4 + 578013 578105 3'utr Ephrin FlyBase G56492.1 ACAATTTCCCATTACAAATCCCATTACTGTTTCAAAACTAGTTATCCTGTACGAAGGATATTTCGACTGAAATTAATTAGCATCGCTGACTAA 229 578074 0.977086078 16 223 1463 0.979452055 1.854306042 0.020547945 0.222707424 0.390410959 229 3 3 286 4:578013-578105 7 Ephrin FBtr0089077|FBtr0089075|FBtr0089076 577321|577321|577321 580122|578143|578143 GATATTT 7mer-m1 dme-miR-283-5p 4 + 578027 578110 3'utr Ephrin FlyBase G42659.1 CAAATCCCATTACTGTTTCAAAACTAGTTATCCTGTACGAAGGATATTTCGACTGAAATTAATTAGCATCGCTGACTAAAAAAC 212 578074 0.909058683 14 198 1329 0.939393939 1.746634199 0.02020202 0.301886792 0.501683502 212 14 4 279 4:578027-578110 7 211.5 4226 FBgn0040324 1976.393333 63.49666667 97.38666667 0.107013111 3.330883511 2.171755203 -5 -5 -5 0.1 dme-miR-8-3p 6mer3-8 CAGTAT 4 578372 578377 + 4_578372_578377_+ 0.99999999 0.999999998 0.999999994 0 Ephrin FBtr0089077 577321 580122 4 + 578347 578395 3'utr Ephrin FlyBase G56494.1 AATTTTATTTTGTAAATGAACCAAGCAGTATAGAGAAGTGATTCTTAAC 21 578390 0.738015224 8 18 127 0.88 1.342422681 0.24 0.19047619 0.32 21 3 0 22 4:578347-578395 6 Ephrin FBtr0089077 577321 580122 CAGTAT 6mer3-8 dme-miR-8-3p 4 + 578347 578395 3'utr Ephrin FlyBase G42661.1 AATTTTATTTTGTAAATGAACCAAGCAGTATAGAGAAGTGATTCTTAAC 22 578390 0.95241322 6 18 111 0.857142857 1.477121255 0.114285714 0.409090909 0.628571429 22 5 0 30 4:578347-578395 6 21.5 4227 FBgn0040324 1976.393333 63.49666667 97.38666667 0.010878401 0.338600451 0.220769441 -18 -18 -18 0.1 dme-miR-932-5p 6mer3-8 GGAATT 4 620290 620295 + 4_620290_620295_+ 1 1 1 0 Eph FBtr0301285 620104 620734 4 + 620268 620360 5'utr Eph FlyBase G56526.1 AGCTCAACAACTTTCGGACATGGGAATTACTTTAGTTGGACATCAAAAAAAGATCTTACATCAAGCCCGGCAACTCGACACTATAATATAAAC 25 620296 0.886773682 11 19 138 0.709677419 1.342422681 0.322580645 0.2 0.35483871 25 9 0 22 4:620268-620360 6 Eph FBtr0301285 620104 620734 GGAATT 6mer3-8 dme-miR-932-5p 4 + 620260 620360 5'utr Eph FlyBase G42685.1 AGGTTAACAGCTCAACAACTTTCGGACATGGGAATTACTTTAGTTGGACATCAAAAAAAGATCTTACATCAAGCCCGGCAACTCGACACTATAATATAAAC 16 620303 0.958889895 11 14 70 0.913043478 1.021189299 0.260869565 0.375 0.565217391 16 1 1 21 4:620260-620360 6 5.5 4228 FBgn0025936 2044.833333 61.14666667 93.30666667 0.002689706 0.089947667 0.058945413 -6 -13 -9.5 0.1 dme-miR-307a-3p 7mer-A1 GTTGTGA 4 620793 620799 + 4_620793_620799_+ 0.714496542 0.701076562 0.707786552 0.009489302 Eph FBtr0089086|FBtr0089082|FBtr0089084|FBtr0089083 620357|620357|620357|620357 622470|620926|620926|620926 4 + 620680 620838 3'utr Eph FlyBase G56528.1 TATACCTTATATATCAATGTGTACCAATTATTTATTATACGAACAATTTTCAAGCTTATTATTATAAGAGTTTAGAGGCGCTATGATTGCCTTGCTATATTTTACCTTTTTTTGTTGTGATAGAAGTGGAATTAAAGAACTATTCATCTTTATTAGATT 190 620793 0.822310191 33 182 2146 0.960352423 1.639486489 0.383259912 0.163157895 0.299559471 190 5 4 218 4:620680-620838 7 Eph FBtr0089084|FBtr0089083|FBtr0089082|FBtr0089086 620357|620357|620357|620357 620926|620926|620926|622470 GTTGTGA 7mer-A1 dme-miR-307a-3p 4 + 620717 620882 3'utr Eph FlyBase G42688.1 TACGAACAATTTTCAAGCTTATTATTATAAGAGTTTAGAGGCGCTATGATTGCCTTGCTATATTTTACCTTTTTTTGTTGTGATAGAAGTGGAATTAAAGAACTATTCATCTTTATTAGATTATATTTCATGGTTTACTTTGCATAAAATAGTGAAAAACTCAATA 101 620793 0.992723967 25 93 1080 0.925170068 1.531478917 0.31292517 0.326732673 0.537414966 101 8 3 136 4:620717-620882 7 103 4229 FBgn0025936 2044.833333 61.14666667 93.30666667 0.050370853 1.684474488 1.103886825 0 0 0 0.1 dme-miR-1006-3p 7mer-A1 GAATTTA 4 649288 649294 - 4_649288_649294_- 0.823349562 0.803395399 0.81337248 0.01410975 gw FBtr0310542 649039 650256 4 - 649283 649330 3'utr gw FlyBase G57000.1 TAGTAAAACCAAGTGATTTAAAAAGAACGTGTATCTGAATTTATTACA 7 649301 0.96727051 5 6 33 1 0.903089987 0 0.142857143 0.25 7 0 0 8 4:649283-649330 7 gw FBtr0310542 649039 650256 GAATTTA 7mer-A1 dme-miR-1006-3p 4 - 649288 649316 3'utr gw FlyBase G43059.1 GATTTAAAAAGAACGTGTATCTGAATTTA 5 649301 0.973742539 2 5 28 1 0.698970004 0.2 0 0 5 0 0 5 4:649288-649316 6 3.5 4230 FBgn0051992 3462.52 78.52666667 120.4066667 0.001010824 0.044570846 0.029068158 7 7 7 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 4 649519 649524 - 4_649519_649524_- 0.97762044 0.983551161 0.9805858 0.004193709 gw FBtr0310542 649039 650256 4 - 649483 649548 3'utr gw FlyBase G57001.1 TGTTTCCAGTAAGGAAAAAATACCTGTGTTATATTCATTAGAGGAAGTTGTAATCGTATTACGGTT 29 649517 0.804503373 10 24 239 0.78125 1.397940009 0.09375 0.103448276 0.1875 29 7 0 25 4:649483-649548 6 gw FBtr0310542 649039 650256 TGTGTT 6mer3-8 dme-miR-317-3p 4 - 649443 649549 3'utr gw FlyBase G43060.1 GTGTTTCCAGTAAGGAAAAAATACCTGTGTTATATTCATTAGAGGAAGTTGTAATCGTATTACGGTTTTGCTTTCATCAAAGCATTCCCACCGAAAAAGTTCGGCTA 26 649520 0.982673745 10 23 181 0.852941176 1.462397998 0.323529412 0.269230769 0.441176471 26 5 0 29 4:649443-649549 6 20.5 4231 FBgn0051992 3462.52 78.52666667 120.4066667 0.005920543 0.261057815 0.170256353 -7 -4 -5.5 0.1 dme-miR-1012-3p 6mer3-8 TTGACT 4 649896 649901 - 4_649896_649901_- 0.967320109 0.87030547 0.918812789 0.068599682 gw FBtr0310542 649039 650256 4 - 649819 649957 3'utr gw FlyBase G57003.1 AAAAAAAAAATGGCATGCTTGATGGTTTGCAAACCTTCCTATTTAAGTAAAGTGTTTTGACTCTGGCTCCCAAAGCTTTCCTTGGGAAACGGGAAAAATTCTCTACAGTGTATATGTGCGCATGCAAACTCATTTGGTA 67 649894 0.907529511 21 67 444 1 1.903089987 0.2625 0.164179104 0.3 67 0 0 80 4:649819-649957 6 gw FBtr0310542 649039 650256 TTGACT 6mer3-8 dme-miR-1012-3p 4 - 649796 649913 3'utr gw FlyBase G43062.1 AAGTAAAGTGTTTTGACTCTGGCTCCCAAAGCTTTCCTTGGGAAACGGGAAAAATTCTCTACAGTGTATATGTGCGCATGCAAACTCATTTGGTAAATTACACATTAATAAATATGTA 45 649894 0.982177047 16 42 311 0.927536232 1.806179974 0.202898551 0.422222222 0.623188406 45 5 0 64 4:649796-649913 6 30 4232 FBgn0051992 3462.52 78.52666667 120.4066667 0.00866421 0.382035826 0.249155639 -7 -7 -7 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 4 686100 686106 + 4_686100_686106_+ 0.66161391 0.661612538 0.661613224 9.90E-07 CG11360 FBtr0089091|FBtr0310540|FBtr0310539|FBtr0310541 686039|686039|686039|686039 689595|687565|690650|687565 4 + 686071 686152 3'utr CG11360 FlyBase G56563.1 TTGTTAGTTTTTAGTTAGTCGGTTACACATCTAGTCGTGGCTTCCGTGAAGTCTATTAACATTAGTTGAACGTTCAGGGATT 96 686100 0.980332826 14 94 780 0.983606557 1.77815125 0.319672131 0.197916667 0.368852459 96 1 1 120 4:686071-686152 7 CG11360 FBtr0310541|FBtr0310539|FBtr0310540|FBtr0089091 686039|686039|686039|686039 687565|690650|687565|689595 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 4 + 686071 686152 3'utr CG11360 FlyBase G42715.1 TTGTTAGTTTTTAGTTAGTCGGTTACACATCTAGTCGTGGCTTCCGTGAAGTCTATTAACATTAGTTGAACGTTCAGGGATT 63 686100 0.760560493 11 60 483 0.968421053 1.662757832 0.442105263 0.380952381 0.589473684 63 2 1 92 4:686071-686152 7 66 4233 FBgn0039920 1210.836667 29.66666667 45.19333333 0.054507765 2.224719101 1.460392388 0 0 0 0.1 dme-miR-317-3p 6mer3-8 TGTGTT 4 687363 687368 + 4_687363_687368_+ 1 1 1 0 CG11360 FBtr0089091|FBtr0310540|FBtr0310539|FBtr0310541 686039|686039|686039|686039 689595|687565|690650|687565 4 + 687347 687383 3'utr CG11360 FlyBase G56564.1 GATATAAAAATTTTTCTGTGTTTTAGGAAGTCATCTA 16 687360 0.697213565 7 14 171 0.9 1.255272505 0.25 0.1875 0.35 16 2 0 18 4:687347-687383 6 CG11360 FBtr0310541|FBtr0310539|FBtr0310540|FBtr0089091 686039|686039|686039|686039 687565|690650|687565|689595 TGTGTT 6mer3-8 dme-miR-317-3p 4 + 687339 687385 3'utr CG11360 FlyBase G42717.1 GAATAGCGGATATAAAAATTTTTCTGTGTTTTAGGAAGTCATCTATA 10 687361 0.988469687 4 8 110 0.727272727 0.602059991 0.454545455 0.1 0.181818182 10 2 1 8 4:687339-687385 6 13 4234 FBgn0039920 1210.836667 29.66666667 45.19333333 0.010736378 0.438202247 0.287653046 3 2 2.5 0.1 dme-miR-2b-2-5p 7mer-A1 TGAAGAA 4 687457 687463 + 4_687457_687463_+ 0.822452821 0.8229024 0.822677611 0.000317915 CG11360 FBtr0089091|FBtr0310540|FBtr0310539|FBtr0310541 686039|686039|686039|686039 689595|687565|690650|687565 4 + 687421 687474 3'utr CG11360 FlyBase G56565.1 AAGTAGAACAAACCCAAATTCTATTGAAGACCTTAGTGAAGAATTTTAATAGTG 11 687454 0.976640334 6 11 74 1 1.146128036 0.071428571 0.272727273 0.428571429 11 0 0 14 4:687421-687474 7 CG11360 FBtr0310541|FBtr0310539|FBtr0310540|FBtr0089091 686039|686039|686039|686039 687565|690650|687565|689595 TGAAGAA 7mer-A1 dme-miR-2b-2-5p 4 + 687424 687470 3'utr CG11360 FlyBase G42718.1 TAGAACAAACCCAAATTCTATTGAAGACCTTAGTGAAGAATTTTAAT 7 687465 0.969190367 6 7 42 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 4:687424-687470 7 7.5 4235 FBgn0039920 1210.836667 29.66666667 45.19333333 0.006194064 0.252808989 0.16595368 3 -8 -2.5 0.1 dme-bantam-3p 6mer3-8 TGATCT 4 688446 688451 + 4_688446_688451_+ 0.999990714 0.999999987 0.999995351 6.58E-06 CG11360 FBtr0089091|FBtr0310539 686039|686039 689595|690650 4 + 688427 688467 3'utr CG11360 FlyBase G56567.1 GTTGACGTTGTGAAATTCCTGATCTGTTATAAAACTTTAAA 18 688453 0.684799664 7 16 154 0.954545455 1.322219295 0.045454545 0.111111111 0.272727273 18 1 0 21 4:688427-688467 6 CG11360 FBtr0310539|FBtr0089091 686039|686039 690650|689595 TGATCT 6mer3-8 dme-bantam-3p 4 + 688427 688458 3'utr CG11360 FlyBase G42719.1 GTTGACGTTGTGAAATTCCTGATCTGTTATAA 6 688454 0.887859386 4 6 52 1 1 0 0.333333333 0.6 6 0 0 10 4:688427-688458 6 11.5 4236 FBgn0039920 1210.836667 29.66666667 45.19333333 0.009497565 0.387640449 0.25446231 -7 -8 -7.5 0.1 dme-miR-184-5p 6mer3-8 TGATAA 4 688895 688900 + 4_688895_688900_+ 0.996841263 0.840562826 0.918702044 0.110505587 CG11360 FBtr0089091|FBtr0310539 686039|686039 689595|690650 4 + 688857 688947 3'utr CG11360 FlyBase G56569.1 ACTTTATGATACTAATTCTCTGAAAAATTTAAAACGACTGATAAATTAGCATAAATATTAAGATCGGACACAATATATATATACATAAATA 41 688902 0.791741347 7 35 301 0.840909091 1.568201724 0.045454545 0.073170732 0.136363636 41 7 0 37 4:688857-688947 6 CG11360 FBtr0310539|FBtr0089091 686039|686039 690650|689595 TGATAA 6mer3-8 dme-miR-184-5p 4 + 688804 688914 3'utr CG11360 FlyBase G42720.1 ATTTATTTTTAAACAACAAACATGATGAAAAATATATTGTATCTATAAAGTAAACTTTATGATACTAATTCTCTGAAAAATTTAAAACGACTGATAAATTAGCATAAATAT 29 688884 0.987200865 11 24 211 0.880952381 1.568201724 0.071428571 0.344827586 0.547619048 29 5 0 37 4:688804-688914 6 27 4237 FBgn0039920 1210.836667 29.66666667 45.19333333 0.022298631 0.91011236 0.59743325 -7 11 2 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA 4 689013 689018 + 4_689013_689018_+ 0.811533244 0.999993962 0.905763603 0.13326191 CG11360 FBtr0089091|FBtr0310539 686039|686039 689595|690650 4 + 688987 689074 3'utr CG11360 FlyBase G56570.1 ACTTAAATCTACGATATATGACCCACATGTGACAACTACCTTTAAAAACTTACTATTAATGTGAATAAAAAGACTTATATATTATAGT 18 689015 0.987360761 6 14 128 0.772727273 1.230448921 0.045454545 0.166666667 0.318181818 18 5 0 17 4:688987-689074 6 CG11360 FBtr0310539|FBtr0089091 686039|686039 690650|689595 ATGTGA 6mer3-8 dme-miR-1003-3p 4 + 688987 689028 3'utr CG11360 FlyBase G42721.1 ACTTAAATCTACGATATATGACCCACATGTGACAACTACCTT 6 689014 0.950137441 4 6 28 1 0.954242509 0.111111111 0.333333333 0.555555556 6 0 0 9 4:688987-689028 6 6 4238 FBgn0039920 1210.836667 29.66666667 45.19333333 0.004955251 0.202247191 0.132762944 -2 -1 -1.5 0.1 dme-miR-14-3p 6mer3-8 AAGACT 4 689056 689061 + 4_689056_689061_+ 0.692495666 0.647556571 0.670026119 0.031776742 CG11360 FBtr0089091|FBtr0310539 686039|686039 689595|690650 4 + 688987 689074 3'utr CG11360 FlyBase G56570.1 ACTTAAATCTACGATATATGACCCACATGTGACAACTACCTTTAAAAACTTACTATTAATGTGAATAAAAAGACTTATATATTATAGT 18 689064 0.987360761 6 14 128 0.772727273 1.230448921 0.045454545 0.166666667 0.318181818 18 5 0 17 4:688987-689074 6 CG11360 FBtr0310539|FBtr0089091 686039|686039 690650|689595 AAGACT 6mer3-8 dme-miR-14-3p 4 + 689044 689076 3'utr CG11360 FlyBase G42722.1 AATGTGAATAAAAAGACTTATATATTATAGTCA 13 689064 0.648082029 3 10 86 0.833333333 1.176091259 0 0.384615385 0.555555556 13 3 0 15 4:689044-689076 6 11 4239 FBgn0039920 1210.836667 29.66666667 45.19333333 0.009084627 0.370786517 0.243398731 -8 -8 -8 0.1 dme-miR-282-5p 7mer-m8 AGAGGCT 4 689247 689253 + 4_689247_689253_+ 0.631503909 0.631521733 0.631512821 1.26E-05 CG11360 FBtr0089091|FBtr0310539 686039|686039 689595|690650 4 + 689178 689278 3'utr CG11360 FlyBase G56572.1 TGTTATACCTGTGTTTTAAAATTGTGTACTGTGCTTCAAGGTTAAATGAATCAATCGAAAATTTGTAATAGAGGCTGGCTTATATATATTTAAATGTATAA 64 689246 0.987691718 10 62 557 0.972972973 1.857332496 0.081081081 0.15625 0.27027027 64 2 0 72 4:689178-689278 7 CG11360 FBtr0310539|FBtr0089091 686039|686039 690650|689595 AGAGGCT 7mer-m8 dme-miR-282-5p 4 + 689229 689273 3'utr CG11360 FlyBase G42724.1 CAATCGAAAATTTGTAATAGAGGCTGGCTTATATATATTTAAATG 30 689246 0.875599858 5 30 230 1 1.653212514 0.022222222 0.4 0.6 30 0 0 45 4:689229-689273 7 42.5 4240 FBgn0039920 1210.836667 29.66666667 45.19333333 0.035099697 1.43258427 0.940404189 1 1 1 0.1 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 4 689631 689637 + 4_689631_689637_+ 0.620203982 0.620204026 0.620204004 0 CG11360 FBtr0310539 686039 690650 4 + 689612 689657 3'utr CG11360 FlyBase G56576.1 TTAAATAAAACGGTATCTATGGTGCTTATAACAAACTTGAACCATA 36 689631 0.773776222 2 36 292 1 1.633468456 0 0.194444444 0.325581395 36 0 0 43 4:689612-689657 7 CG11360 FBtr0310539 686039 690650 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 4 + 689615 689651 3'utr CG11360 FlyBase G42727.1 AATAAAACGGTATCTATGGTGCTTATAACAAACTTGA 18 689631 0.723881904 5 17 132 0.964285714 1.431363764 0.071428571 0.388888889 0.607142857 18 1 0 27 4:689615-689651 7 26.5 4241 FBgn0039920 1210.836667 29.66666667 45.19333333 0.021885693 0.893258427 0.586369671 0 0 0 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC 4 690436 690442 + 4_690436_690442_+ 0.661608826 0.661589184 0.661599005 1.39E-05 CG11360 FBtr0310539 686039 690650 4 + 690417 690460 3'utr CG11360 FlyBase G56578.1 AATATGAAAATATCCGTATTGTGTTCGACAAAAAGTAATATATC 19 690435 0.981184139 4 19 141 1 1.361727836 0 0.210526316 0.347826087 19 0 0 23 4:690417-690460 7 CG11360 FBtr0310539 686039 690650 TGTGTTC 7mer-m8 dme-miR-317-3p 4 + 690420 690448 3'utr CG11360 FlyBase G42729.1 ATGAAAATATCCGTATTGTGTTCGACAAA 11 690435 0.701129252 2 11 78 1 1.230448921 0 0.545454545 0.705882353 11 0 0 17 4:690420-690448 7 15 4242 FBgn0039920 1210.836667 29.66666667 45.19333333 0.012388128 0.505617978 0.331907361 1 1 1 0.1 dme-miR-263a-5p 6mer3-8 GTGCCA 4 691089 691094 - 4_691089_691094_- 0.99814458 0.999999826 0.999072203 0.001311825 myo FBtr0089095 690684 691990 4 - 690983 691145 3'utr myo FlyBase G57048.1 TGAAACTTATTCCGATTAGTTCCTACGATATAAGCTCGAATGCTTGGTTGAGTGCCAAAAAGAACTTATTTTTCTTATGCGTTATTTTCGAATCTTCTATTAACACTACTTGTCGCAGGATTGGCTTCTAAACGTTTGCAAGAGTACTTAGGAGTTGTCAATA 16 691100 0.983782635 12 16 133 1 1.204119983 0.1875 0 0 16 0 0 16 4:690983-691145 6 myo FBtr0089095 690684 691990 GTGCCA 6mer3-8 dme-miR-263a-5p 4 - 691074 691141 3'utr myo FlyBase G43111.1 ACTTATTCCGATTAGTTCCTACGATATAAGCTCGAATGCTTGGTTGAGTGCCAAAAAGAACTTATTTT 9 691094 0.972382134 7 8 55 1 1.079181246 0.416666667 0.222222222 0.416666667 9 0 0 12 4:691074-691141 6 5 4243 FBgn0026199 2431.316667 94.48333333 145.4933333 0.002056499 0.052919386 0.034365836 6 0 3 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG 4 778803 778808 - 4_778803_778808_- 0.526226935 0.927483503 0.726855219 0.283731263 MED26 FBtr0089253|FBtr0089254 778514|778514 778826|778826 4 - 778782 778821 3'utr MED26 FlyBase G57074.1 ACGTTTCTTTCACGCTGTGTGATAACATTTCCGAAACAAA 12 778813 0.953319592 5 11 84 1 1.176091259 0.466666667 0.083333333 0.266666667 12 0 0 15 4:778782-778821 6 MED26 FBtr0089254|FBtr0089253 778514|778514 778826|778826 GCTGTG 6mer2-7 dme-miR-1008-3p 4 - 778780 778822 3'utr MED26 FlyBase G43129.1 GACGTTTCTTTCACGCTGTGTGATAACATTTCCGAAACAAAAA 7 778813 0.985128228 5 7 56 1 0.954242509 0.555555556 0.285714286 0.444444444 7 0 0 9 4:778780-778822 6 9 4244 FBgn0039923 1747.52 42.37333333 64.98333333 0.005150156 0.212397734 0.138497051 5 5 5 0.1 dme-miR-283-5p 6mer3-8 TGATAT 4 855396 855401 - 4_855396_855401_- 0.802401183 0.999999304 0.901200243 0.139722956 CG11148 FBtr0300886 853714 855509 4 - 855380 855469 5'utr CG11148 FlyBase G57100.1 AAATTTAAAATGTTATGAACTGCAGAATTGAAATAAACTTAGGTCACAAGATTATGTGCGTTAAACTCTGATATACCTAAATAAATATAT 32 855398 0.750894564 14 29 228 0.930232558 1.124938737 0.186046512 0.28125 0.465116279 32 1 2 40 4:855380-855469 6 CG11148 FBtr0300886 853714 855509 TGATAT 6mer3-8 dme-miR-283-5p 4 - 855379 855432 5'utr CG11148 FlyBase G43148.1 CTTAGGTCACAAGATTATGTGCGTTAAACTCTGATATACCTAAATAAATATATA 12 855400 0.985337594 5 9 89 0.666666667 1.079181246 0.111111111 0.25 0.5 12 6 0 12 4:855379-855432 6 13.5 4245 FBgn0039936 3661.476667 89.62 137.45 0.003687037 0.150636019 0.098217534 -3 -1 -2 0.1 dme-bantam-3p 7mer-m8 TGATCTC X 10077302 10077308 - X_10077302_10077308_- 0.661614413 0.661615144 0.661614779 4.95E-07 ZAP3 FBtr0308584 10077004 10077349 X - 10077244 10077335 5'utr ZAP3 FlyBase G66210.1 GGCAGCAGCAGCGCAGGACCTGATCTTTGATCTCTGAACTCTGAACTCTGAACTCTGAACTCTGAACTCTGAACTCTGAACTCTGAACTCTG 90 10077301 0.988264536 8 82 753 0.902912621 1.366422957 0.233009709 0.133333333 0.242718447 90 7 3 93 X:10077244-10077335 7 ZAP3 FBtr0308584 10077004 10077349 TGATCTC 7mer-m8 dme-bantam-3p X - 10077278 10077335 5'utr ZAP3 FlyBase G49842.1 GGCAGCAGCAGCGCAGGACCTGATCTTTGATCTCTGAACTCTGAACTCTGAACTCTGA 70 10077301 0.986149418 6 66 555 0.944444444 1.309630167 0.175925926 0.4 0.611111111 70 2 4 102 X:10077278-10077335 7 79 4246 FBgn0052685 2208 46.58 71.55666667 0.035778986 1.69600687 1.104020124 -7 -7 -7 0.1 dme-bantam-3p 6mer2-7 GATCTC X 10206825 10206830 - X_10206825_10206830_- 0.801814528 0.692248683 0.747031606 0.07747472 CG15309 FBtr0071487|FBtr0112974|FBtr0332898|FBtr0332899|FBtr0332900 10206591|10206591|10205290|10205290|10205290 10207230|10207230|10207230|10207230|10207230 X - 10206805 10206844 3'utr CG15309 FlyBase G66232.1 GGGTTTTTGGGAAGGATCTCTGCGCTGGCCGCCATCTAGG 12 10206824 0.752897493 2 12 58 1 1.113943352 0.538461538 0.083333333 0.153846154 12 0 0 13 X:10206805-10206844 6 CG15309 FBtr0071487|FBtr0332900|FBtr0332899|FBtr0332898|FBtr0112974 10206591|10205290|10205290|10205290|10206591 10207230|10207230|10207230|10207230|10207230 GATCTC 6mer2-7 dme-bantam-3p X - 10206810 10206849 3'utr CG15309 FlyBase G49861.1 TGATTGGGTTTTTGGGAAGGATCTCTGCGCTGGCCGCCAT 17 10206824 0.810177968 3 16 108 1 1.414973348 0.346153846 0.411764706 0.615384615 17 0 0 26 X:10206810-10206849 6 14 4247 FBgn0030183 132.9233333 6.51 10.00333333 0.105323871 2.150537634 1.399533489 -6 -6 -6 0.1 dme-miR-308-3p 8mer-m1 CTGTGATT X 10237120 10237127 - X_10237120_10237127_- 0.384836264 0.378092745 0.381464504 0.004768445 Hk FBtr0331336|FBtr0307879 10233345|10234756 10239443|10239443 X - 10237096 10237148 3'utr Hk FlyBase G66235.1 AAAGTCTTTCTCACATACGGACTGTGATTTCATATAAAAGTAAACGTAAAAGT 32 10237120 0.898170289 6 32 225 1 1.579783597 0.131578947 0.125 0.263157895 32 0 0 38 X:10237096-10237148 8 Hk FBtr0331336|FBtr0307879 10233345|10234756 10239443|10239443 CTGTGATT 8mer-m1 dme-miR-308-3p X - 10237105 10237146 3'utr Hk FlyBase G49863.1 AGTCTTTCTCACATACGGACTGTGATTTCATATAAAAGTAAA 17 10237120 0.95820351 2 17 121 1 1.397940009 0.04 0.411764706 0.6 17 0 0 25 X:10237105-10237146 8 24.5 4248 FBgn0263220 189.6466667 3.833333333 5.9 0.129187612 6.391304348 4.152542373 -7 -7 -7 0.1 dme-miR-14-3p 6mer3-8 AAGACT X 10264306 10264311 - X_10264306_10264311_- 1 0.999984301 0.99999215 1.11E-05 CG12643 FBtr0071481 10264231 10264840 X - 10264283 10264332 3'utr CG12643 FlyBase G66241.1 TTTAATTTGTATTTAGAGCTAAAGACTACAGTTTATACATTTTATGAATT 22 10264313 0.844661757 7 20 173 0.884615385 1.361727836 0.230769231 0.181818182 0.307692308 22 3 0 23 X:10264283-10264332 6 CG12643 FBtr0071481 10264231 10264840 AAGACT 6mer3-8 dme-miR-14-3p X - 10264282 10264337 3'utr CG12643 FlyBase G49865.1 ACGTATTTAATTTGTATTTAGAGCTAAAGACTACAGTTTATACATTTTATGAATTT 14 10264322 0.82261246 7 13 146 0.9 1.255272505 0.15 0.428571429 0.6 14 2 0 18 X:10264282-10264337 6 17 4249 FBgn0040942 927.6666667 110.47 167.3433333 0.018325548 0.153887933 0.101587555 2 11 6.5 0.1 dme-miR-283-5p 8mer-A1 TGATATTA X 10277097 10277104 - X_10277097_10277104_- 0.592188887 0.592184543 0.592186715 3.11E-06 alpha-Man-I FBtr0300512|FBtr0300514|FBtr0299633|FBtr0300513|FBtr0299632|FBtr0300516|FBtr0300515|FBtr0300511|FBtr0331759 10266790|10276053|10276053|10276053|10276616|10276053|10276053|10266790|10276616 10277555|10277555|10277555|10277555|10277555|10277555|10277555|10277555|10277555 X - 10277083 10277189 3'utr alpha-Man-I FlyBase G66252.1 AATCCAAATAGTTGACAGAGGTGGATGGTGGGAAGACCTCAATTTCCATTTAAATGCGAATGACGTAGACGTAGGCAAAAACTCTTGATATTAATTATGATATGATA 53 10277105 0.857335094 9 52 380 0.982758621 1.755874856 0.25862069 0.094339623 0.172413793 53 1 0 57 X:10277083-10277189 8 alpha-Man-I FBtr0300515|FBtr0331759|FBtr0300511|FBtr0299632|FBtr0300516|FBtr0299633|FBtr0300513|FBtr0300512|FBtr0300514 10276053|10276616|10266790|10276616|10276053|10276053|10276053|10266790|10276053 10277555|10277555|10277555|10277555|10277555|10277555|10277555|10277555|10277555 TGATATTA 8mer-A1 dme-miR-283-5p X - 10277086 10277131 3'utr alpha-Man-I FlyBase G49876.1 AATGACGTAGACGTAGGCAAAAACTCTTGATATTAATTATGATATG 21 10277105 0.752342287 5 21 144 1 1.579783597 0.131578947 0.666666667 0.815789474 21 0 0 38 X:10277086-10277131 8 27 4250 FBgn0259170 1144.146667 34.71333333 53.02333333 0.023598373 0.777799117 0.509209782 1 1 1 0.1 dme-miR-7-5p 6mer2-7 TCTTCC X 10356748 10356753 - X_10356748_10356753_- 0.999999985 0.964136327 0.982068156 0.025359465 l(1)G0289 FBtr0347009 10348678 10357744 X - 10356721 10356794 5'utr l(1)G0289 FlyBase G66270.1 TTTGTGTGCGTGCGCGTTTTGCTGGACTCTTCGCTAAAAGTTCTTCCTCAAATTGTGTAATTGTATTTTCCTTC 22 10356772 0.778629481 10 19 213 0.884615385 0.884606581 0.192307692 0.181818182 0.307692308 22 1 2 23 X:10356721-10356794 6 l(1)G0289 FBtr0347009 10348678 10357744 TCTTCC 6mer2-7 dme-miR-7-5p X - 10356731 10356793 5'utr l(1)G0289 FlyBase G49887.1 TTGTGTGCGTGCGCGTTTTGCTGGACTCTTCGCTAAAAGTTCTTCCTCAAATTGTGTAATTGT 9 10356776 0.68762388 6 8 73 1 1.278753601 0.105263158 0.666666667 0.842105263 9 0 0 19 X:10356731-10356793 6 5.5 4251 FBgn0028331 5573.983333 212.8733333 325.9566667 0.000986727 0.025836961 0.016873409 19 23 21 0.1 dme-miR-252-5p 6mer3-8 GTACTT X 10356816 10356821 - X_10356816_10356821_- 0.999907494 0.998496911 0.999202202 0.000997445 l(1)G0289 FBtr0347009 10348678 10357744 X - 10356813 10356839 5'utr-coding l(1)G0289 FlyBase G66271.1 AGATGTCGAAGAAGGGCTGTACTTTCT 9 10356816 0.579371467 4 7 53 0.727272727 0.903089987 0.181818182 0.222222222 0.363636364 9 3 0 8 X:10356813-10356839 6 l(1)G0289 FBtr0347009 10348678 10357744 GTACTT 6mer3-8 dme-miR-252-5p X - 10356813 10356847 5'utr-coding l(1)G0289 FlyBase G49888.1 GCTTGAAAAGATGTCGAAGAAGGGCTGTACTTTCT 18 10356817 0.681137118 5 16 102 0.875 1.322219295 0.208333333 0.333333333 0.5 18 3 0 21 X:10356813-10356847 6 12.5 4252 FBgn0028331 5573.983333 212.8733333 325.9566667 0.002242561 0.058720366 0.038348656 -5 -4 -4.5 0.1 dme-bantam-3p 6mer3-8 TGATCT X 10357226 10357231 - X_10357226_10357231_- 1 1 1 0 l(1)G0289 FBtr0347009|FBtr0071470 10348678|10356827 10357744|10357744 X - 10357030 10357257 5'utr l(1)G0289 FlyBase G66273.2 GAAAGACGACTGGCAACAGCATGAAGTGATCTGTTAAATGTATCTTTTTACCTTTTTTACCGTACCGCCTGCCCATTAGAAGAAAAGCAAAAAAGAGAGAGAGAAAAAAAATGTATAATAATAATGAATAATACCCCAGAAGACAACTCAACTATTGTATAACTCTGAGACCAACGGCTCCCACCAGGCCACGCACACATCCATACCTAAAGCACACACACACACACT 104 10357226 0.965407144 23 93 494 0.880952381 1.744292983 0.158730159 0.201923077 0.341269841 104 14 1 111 X:10357030-10357257 6 l(1)G0289 FBtr0071470|FBtr0347009 10356827|10348678 10357744|10357744 TGATCT 6mer3-8 dme-bantam-3p X - 10357204 10357257 5'utr l(1)G0289 FlyBase G49889.2 GAAAGACGACTGGCAACAGCATGAAGTGATCTGTTAAATGTATCTTTTTACCTT 36 10357226 0.646513221 8 33 224 0.966101695 1.755874856 0.152542373 0.472222222 0.677966102 36 2 0 57 X:10357204-10357257 6 40.5 4253 FBgn0028331 5573.983333 212.8733333 325.9566667 0.007265899 0.190253985 0.124249645 -5 -5 -5 0.1 dme-miR-1012-3p 6mer3-8 TTGACT X 10357294 10357299 - X_10357294_10357299_- 0.999988419 0.956852252 0.978420335 0.030501829 l(1)G0289 FBtr0347009|FBtr0071470 10348678|10356827 10357744|10357744 X - 10357273 10357411 5'utr-coding l(1)G0289 FlyBase G66274.1 ACTGATTGTTGAGATTTAGCTCAGAACGCTGCCGAAACCGAACAAAACAACAACTAAAAAAAGAAATGAAAGCAATTTAGAAGTGTAAAGTATAGACACAGGACCTGAGTTCTTGACTCCCAGTCCCCCGGAACCAACT 20 10357298 0.959457343 13 19 86 0.909090909 1.301029996 0.045454545 0.1 0.181818182 20 2 0 20 X:10357273-10357411 6 l(1)G0289 FBtr0071470|FBtr0347009 10356827|10348678 10357744|10357744 TTGACT 6mer3-8 dme-miR-1012-3p X - 10357269 10357329 5'utr l(1)G0289 FlyBase G49890.1 GTGTAAAGTATAGACACAGGACCTGAGTTCTTGACTCCCAGTCCCCCGGAACCAACTGCTC 8 10357320 0.953472452 4 6 33 0.833333333 0.698970004 0.166666667 0.375 0.583333333 8 1 1 10 X:10357269-10357329 6 3.5 4254 FBgn0028331 5573.983333 212.8733333 325.9566667 0.000627917 0.016441702 0.010737624 -1 21 10 0.1 dme-miR-304-5p 7mer-m8 TGAGATT X 10357396 10357402 - X_10357396_10357402_- 0.620203442 0.620203442 0.620203442 0 l(1)G0289 FBtr0347009|FBtr0071470|FBtr0347008 10348678|10356827|10357355 10357744|10357744|10357744 X - 10357273 10357411 5'utr-coding l(1)G0289 FlyBase G66274.1 ACTGATTGTTGAGATTTAGCTCAGAACGCTGCCGAAACCGAACAAAACAACAACTAAAAAAAGAAATGAAAGCAATTTAGAAGTGTAAAGTATAGACACAGGACCTGAGTTCTTGACTCCCAGTCCCCCGGAACCAACT 20 10357382 0.959457343 13 19 86 0.909090909 1.301029996 0.045454545 0.1 0.181818182 20 2 0 20 X:10357273-10357411 7 l(1)G0289 FBtr0347008|FBtr0071470|FBtr0347009 10357355|10356827|10348678 10357744|10357744|10357744 TGAGATT 7mer-m8 dme-miR-304-5p X - 10357372 10357417 5'utr l(1)G0289 FlyBase G49891.1 TTTTGAACTGATTGTTGAGATTTAGCTCAGAACGCTGCCGAAACCG 7 10357403 0.948855179 4 7 55 1 0.903089987 0 0.142857143 0.25 7 0 0 8 X:10357372-10357417 7 5.5 4255 FBgn0028331 5573.983333 212.8733333 325.9566667 0.000986727 0.025836961 0.016873409 -20 1 -9.5 0.1 dme-miR-11-3p 7mer-m1 TGTGATG X 10357459 10357465 - X_10357459_10357465_- 0.588953236 0.611443152 0.600198194 0.015902832 l(1)G0289 FBtr0347009|FBtr0071470|FBtr0347008 10348678|10356827|10357355 10357744|10357744|10357744 X - 10357427 10357478 5'utr l(1)G0289 FlyBase G66275.1 ACCCGTCTGTAATTGTGATGTGTTCCATGATGCGTCCACAATGTCAACCAAA 13 10357466 0.986179769 5 12 101 1 1.176091259 0.133333333 0.153846154 0.266666667 13 0 0 15 X:10357427-10357478 7 l(1)G0289 FBtr0347008|FBtr0071470|FBtr0347009 10357355|10356827|10348678 10357744|10357744|10357744 TGTGATG 7mer-m1 dme-miR-11-3p X - 10357439 10357485 5'utr l(1)G0289 FlyBase G49892.1 ATTTGAAACCCGTCTGTAATTGTGATGTGTTCCATGATGCGTCCACA 12 10357466 0.977470675 7 10 88 0.75 1.079181246 0.3125 0.25 0.4375 12 4 0 12 X:10357439-10357485 7 10 4256 FBgn0028331 5573.983333 212.8733333 325.9566667 0.001794049 0.046976293 0.030678925 1 1 1 0.1 dme-miR-34-5p 6mer3-8 CACTGC X 10463750 10463755 - X_10463750_10463755_- 0.999297942 0.999521167 0.999409554 0.000157897 nocte FBtr0332953 10461863 10464452 X - 10463735 10463779 3'utr nocte FlyBase G66291.1 AAGAAAAACAAAACGAACCTTTGGCACTGCGTATGCTTTAATTTC 30 10463759 0.946578925 6 30 128 1 1.612783857 0 0.233333333 0.43902439 30 0 0 41 X:10463735-10463779 6 nocte FBtr0332953 10461863 10464452 CACTGC 6mer3-8 dme-miR-34-5p X - 10463739 10463775 3'utr nocte FlyBase G49900.1 AAAACAAAACGAACCTTTGGCACTGCGTATGCTTTAA 14 10463759 0.942634995 4 14 59 1 1.361727836 0 0.428571429 0.652173913 14 0 0 23 X:10463739-10463775 6 21.5 4257 FBgn0261710 3253.496667 44.13333333 68.01666667 0.006608275 0.487160121 0.316098995 4 4 4 0.1 dme-miR-33-5p 7mer-A1 AATGCAA X 10463983 10463989 - X_10463983_10463989_- 0.782911823 0.782911717 0.78291177 7.07E-08 nocte FBtr0071460|FBtr0332953|FBtr0307488|FBtr0071461 10463816|10461863|10463816|10463816 10464452|10464452|10464452|10464452 X - 10463934 10464009 3'utr nocte FlyBase G66293.1 AAACGAGTAAGGAATACCTAAATGCAAGAAGAAATATTTAACAAAAATGAACAGAATACAACACCATGCCACACCA 12 10463989 0.917418033 6 12 40 1 1.113943352 0.384615385 0.083333333 0.153846154 12 0 0 13 X:10463934-10464009 7 nocte FBtr0071461|FBtr0307488|FBtr0332953|FBtr0071460 10463816|10463816|10461863|10463816 10464452|10464452|10464452|10464452 AATGCAA 7mer-A1 dme-miR-33-5p X - 10463975 10464034 3'utr nocte FlyBase G49902.1 AAGACGAAAGTTAAGAATCAACAGGAAACGAGTAAGGAATACCTAAATGCAAGAAGAAAT 8 10463988 0.801798429 3 7 17 1 1.113943352 0.076923077 0.5 0.692307692 8 0 0 13 X:10463975-10464034 7 7.5 4258 FBgn0261710 3253.496667 44.13333333 68.01666667 0.002305212 0.169939577 0.110267091 0 -1 -0.5 0.1 dme-miR-1008-3p 6mer3-8 AGCTGT X 10464137 10464142 - X_10464137_10464142_- 0.948264424 0.999444523 0.973854473 0.036189796 nocte FBtr0071460|FBtr0332953|FBtr0307488|FBtr0071461 10463816|10461863|10463816|10463816 10464452|10464452|10464452|10464452 X - 10464089 10464171 3'utr nocte FlyBase G66294.1 AAGGGGCGATGCGAGTAGAATAGTGCTATAGCTGTTTGGGGGAATCCCCGTCACAATCGCAAAATGGCAACTCAGCTAAATCA 50 10464135 0.986726075 6 48 322 0.982758621 1.755874856 0.206896552 0.12 0.24137931 50 1 0 57 X:10464089-10464171 6 nocte FBtr0071461|FBtr0307488|FBtr0332953|FBtr0071460 10463816|10463816|10461863|10463816 10464452|10464452|10464452|10464452 AGCTGT 6mer3-8 dme-miR-1008-3p X - 10464094 10464174 3'utr nocte FlyBase G49903.1 TGAAAGGGGCGATGCGAGTAGAATAGTGCTATAGCTGTTTGGGGGAATCCCCGTCACAATCGCAAAATGGCAACTCAGCTA 38 10464135 0.97276488 7 35 193 0.943396226 1.698970004 0.150943396 0.236842105 0.452830189 38 3 0 50 X:10464094-10464174 6 30 4259 FBgn0261710 3253.496667 44.13333333 68.01666667 0.009220849 0.679758308 0.441068366 -7 -7 -7 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA X 10482440 10482447 - X_10482440_10482447_- 0.643565425 0.643564163 0.643564794 8.49E-07 CG32687 FBtr0336901|FBtr0071458 10482026|10482026 10482859|10482859 X - 10482411 10482474 3'utr CG32687 FlyBase G66325.1 TGTTACTCACACACCTACACAATCTATACCAAAGAAACTCGACTGGCTTTCACTGGGCAAAAAC 44 10482448 0.952694666 7 37 173 0.851851852 0.963787827 0.018518519 0.181818182 0.333333333 44 4 4 46 X:10482411-10482474 8 CG32687 FBtr0071458|FBtr0336901 10482026|10482026 10482859|10482859 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X - 10482405 10482464 3'utr CG32687 FlyBase G49922.1 ACACCTACACAATCTATACCAAAGAAACTCGACTGGCTTTCACTGGGCAAAAACAAATAG 40 10482448 0.949922093 5 34 149 0.821428571 1.185636577 0 0.325 0.517857143 40 8 2 46 X:10482405-10482464 8 40 4260 FBgn0052687 315.3033333 16.03666667 24.44666667 0.126861964 2.494283933 1.63621489 1 1 1 0.1 dme-miR-317-3p 6mer3-8 TGTGTT X 10482485 10482490 - X_10482485_10482490_- 0.981495737 0.969573544 0.975534641 0.008430268 CG32687 FBtr0336901|FBtr0071458 10482026|10482026 10482859|10482859 X - 10482476 10482566 3'utr CG32687 FlyBase G66326.1 CACACGTTACCAATTTGAACTAGTTTGCTAAGTGATTACACGACCTGTTTGCTTGCTCGCCTTGCGTGCCAATTTCTGTGTTTCTGTTTGC 20 10482519 0.697209296 12 19 168 0.913043478 1.322219295 0.173913043 0.15 0.260869565 20 2 0 21 X:10482476-10482566 6 CG32687 FBtr0071458|FBtr0336901 10482026|10482026 10482859|10482859 TGTGTT 6mer3-8 dme-miR-317-3p X - 10482473 10482570 3'utr CG32687 FlyBase G49923.1 TCTTCACACGTTACCAATTTGAACTAGTTTGCTAAGTGATTACACGACCTGTTTGCTTGCTCGCCTTGCGTGCCAATTTCTGTGTTTCTGTTTGCTTG 21 10482493 0.890878522 15 19 185 0.891891892 0.916453949 0.378378378 0.619047619 0.783783784 21 1 3 33 X:10482473-10482570 6 5.5 4261 FBgn0052687 315.3033333 16.03666667 24.44666667 0.01744352 0.342964041 0.224979547 29 3 16 0.1 dme-miR-8-3p 7mer-m8 CAGTATT X 10490625 10490631 - X_10490625_10490631_- 0.661611612 0.661608771 0.661610192 1.98E-06 spri FBtr0336902|FBtr0310293|FBtr0310296|FBtr0310292|FBtr0336903|FBtr0112690|FBtr0310295|FBtr0336904|FBtr0310438 10490067|10490345|10490345|10490345|10490067|10490067|10490345|10490345|10490345 10490817|10490817|10490817|10490817|10490817|10490817|10490817|10490817|10490817 X - 10490576 10491026 stop_codon spri FlyBase G66339.1 TGTGCCGCATCATTGCGCACAAGGCGCGCATCACAAATCCGCAGGACTATGCGCTCTTTAAGCTGGTCGATGGCGAGGAGACGCTGCTGACGGACGCAGAGTGTCCGCAGGATGCCCGATTGGCGGCCAAGGGAAAGCATTGCATGCTGGCCTACAAGCGGATCGATGCCAAGATCGCCTGGCCGACCGCCCAGCTGGCAGGACACTGAATCATCAGCTCGGGGATGCACCCGATGCAAATATACGACATACCGCCCCGCCCGCTCTGCCCTTCTTGCTCACTAACCAAGCATATTTGATTAATAATTTATTATTATTACATTAAAATATACTTAGTAGCCTGTAAGTAAAGCTAATTAATGCTAATTAGAAAACATCTAATGTGTACTAAACATCAGTATTGAGTTAAGTGTGTTTTTTTTTCCTGACCCACGGGTCAAGCCCCCTTTTT 466 10490632 0.97491484 64 448 2790 0.961538462 2.021189299 0.166666667 0.135193133 0.261904762 466 17 4 525 X:10490576-10491026 7 spri FBtr0336903|FBtr0112690|FBtr0336904|FBtr0310295|FBtr0310438|FBtr0336902|FBtr0310293|FBtr0310296|FBtr0310292 10490067|10490067|10490345|10490345|10490345|10490067|10490345|10490345|10490345 10490817|10490817|10490817|10490817|10490817|10490817|10490817|10490817|10490817 CAGTATT 7mer-m8 dme-miR-8-3p X - 10490611 10490860 stop_codon spri FlyBase G49934.2 TGCCAAGATCGCCTGGCCGACCGCCCAGCTGGCAGGACACTGAATCATCAGCTCGGGGATGCACCCGATGCAAATATACGACATACCGCCCCGCCCGCTCTGCCCTTCTTGCTCACTAACCAAGCATATTTGATTAATAATTTATTATTATTACATTAAAATATACTTAGTAGCCTGTAAGTAAAGCTAATTAATGCTAATTAGAAAACATCTAATGTGTACTAAACATCAGTATTGAGTTAAGTGTGTT 280 10490632 0.928461665 40 255 1741 0.919047619 1.8876173 0.164285714 0.371428571 0.580952381 280 30 4 386 X:10490611-10490860 7 129 4262 FBgn0085443 1112.173333 25.35666667 38.71333333 0.115989114 5.087419482 3.332185294 1 1 1 0.1 dme-miR-31a-5p 6mer3-8 TCTTGC X 10490749 10490754 - X_10490749_10490754_- 0.557946233 0.968416659 0.763181446 0.290246474 spri FBtr0336902|FBtr0310293|FBtr0310296|FBtr0310292|FBtr0336903|FBtr0112690|FBtr0310295|FBtr0336904|FBtr0310438 10490067|10490345|10490345|10490345|10490067|10490067|10490345|10490345|10490345 10490817|10490817|10490817|10490817|10490817|10490817|10490817|10490817|10490817 X - 10490576 10491026 stop_codon spri FlyBase G66339.1 TGTGCCGCATCATTGCGCACAAGGCGCGCATCACAAATCCGCAGGACTATGCGCTCTTTAAGCTGGTCGATGGCGAGGAGACGCTGCTGACGGACGCAGAGTGTCCGCAGGATGCCCGATTGGCGGCCAAGGGAAAGCATTGCATGCTGGCCTACAAGCGGATCGATGCCAAGATCGCCTGGCCGACCGCCCAGCTGGCAGGACACTGAATCATCAGCTCGGGGATGCACCCGATGCAAATATACGACATACCGCCCCGCCCGCTCTGCCCTTCTTGCTCACTAACCAAGCATATTTGATTAATAATTTATTATTATTACATTAAAATATACTTAGTAGCCTGTAAGTAAAGCTAATTAATGCTAATTAGAAAACATCTAATGTGTACTAAACATCAGTATTGAGTTAAGTGTGTTTTTTTTTCCTGACCCACGGGTCAAGCCCCCTTTTT 466 10490752 0.97491484 64 448 2790 0.961538462 2.021189299 0.166666667 0.135193133 0.261904762 466 17 4 525 X:10490576-10491026 6 spri FBtr0336903|FBtr0112690|FBtr0336904|FBtr0310295|FBtr0310438|FBtr0336902|FBtr0310293|FBtr0310296|FBtr0310292 10490067|10490067|10490345|10490345|10490345|10490067|10490345|10490345|10490345 10490817|10490817|10490817|10490817|10490817|10490817|10490817|10490817|10490817 TCTTGC 6mer3-8 dme-miR-31a-5p X - 10490611 10490860 stop_codon spri FlyBase G49934.2 TGCCAAGATCGCCTGGCCGACCGCCCAGCTGGCAGGACACTGAATCATCAGCTCGGGGATGCACCCGATGCAAATATACGACATACCGCCCCGCCCGCTCTGCCCTTCTTGCTCACTAACCAAGCATATTTGATTAATAATTTATTATTATTACATTAAAATATACTTAGTAGCCTGTAAGTAAAGCTAATTAATGCTAATTAGAAAACATCTAATGTGTACTAAACATCAGTATTGAGTTAAGTGTGTT 280 10490752 0.928461665 40 255 1741 0.919047619 1.8876173 0.164285714 0.371428571 0.580952381 280 30 4 386 X:10490611-10490860 6 90.5 4263 FBgn0085443 1112.173333 25.35666667 38.71333333 0.081372208 3.56908111 2.337695884 -2 -2 -2 0.1 dme-miR-1002-5p 6mer3-8 CTACTT X 10713148 10713153 - X_10713148_10713153_- 0.451229041 0.403904341 0.427566691 0.033463616 CG32676 FBtr0071503|FBtr0333017 10713113|10711161 10714398|10714398 X - 10713126 10713268 3'utr CG32676 FlyBase G66371.1 TTTGTCCTACACTTACTATTATAACCCAATTCAACAAATGCAATTAGATCTAGGCGAGTTTAACTTTTAAACTTTTGAGTTGGTTTCATTTGTCTTTGCCTCGTGTGCACCACAACTACTTGATTTCAATAAATGTTTAGTAA 57 10713149 0.765821197 17 53 456 0.947368421 1.857332496 0.065789474 0.280701754 0.460526316 57 4 0 72 X:10713126-10713268 6 CG32676 FBtr0333017|FBtr0071503 10711161|10713113 10714398|10714398 CTACTT 6mer3-8 dme-miR-1002-5p X - 10713126 10713250 3'utr CG32676 FlyBase G49961.1 TTATAACCCAATTCAACAAATGCAATTAGATCTAGGCGAGTTTAACTTTTAAACTTTTGAGTTGGTTTCATTTGTCTTTGCCTCGTGTGCACCACAACTACTTGATTTCAATAAATGTTTAGTAA 55 10713149 0.829515114 16 49 460 0.911392405 1.255272505 0.164556962 0.381818182 0.569620253 55 4 3 72 X:10713126-10713250 6 24.5 4264 FBgn0052676 977.3866667 21.50333333 32.91666667 0.025066845 1.139358239 0.744303797 -4 -4 -4 0.1 dme-miR-92b-3p 7mer-m1 TGCAATT X 10713389 10713395 - X_10713389_10713395_- 0.765500526 0.48927563 0.627388078 0.1953205 CG32676 FBtr0071503|FBtr0333017 10713113|10711161 10714398|10714398 X - 10713329 10713428 3'utr CG32676 FlyBase G66372.1 ATTAGTTAGTAAGACTATGTTTTCTATTCATTTTGCAATTATCATTACACTTATAATTACCAATTGGATTAGTTAAGTTGCGCAATGGAAGCGTCTGAGA 17 10713407 0.992156932 6 16 182 0.947368421 1.255272505 0.105263158 0.117647059 0.210526316 17 1 0 18 X:10713329-10713428 7 CG32676 FBtr0333017|FBtr0071503 10711161|10713113 10714398|10714398 TGCAATT 7mer-m1 dme-miR-92b-3p X - 10713393 10713426 3'utr CG32676 FlyBase G49963.1 TAGTTAGTAAGACTATGTTTTCTATTCATTTTGC 8 10713389 0.587744676 3 7 92 1 1.204119983 0.375 0.625 0.8125 8 0 0 16 X:10713393-10713426 2 13.5 4265 FBgn0052676 977.3866667 21.50333333 32.91666667 0.013812343 0.627809642 0.410126582 12 -6 3 0.1 dme-miR-317-3p 6mer3-8 TGTGTT X 10713493 10713498 - X_10713493_10713498_- 0.999627126 0.999726853 0.99967699 7.06E-05 CG32676 FBtr0071503|FBtr0333017 10713113|10711161 10714398|10714398 X - 10713434 10713525 3'utr CG32676 FlyBase G66373.1 TTTTTATATATACTTTATCACCAAGAATGTGTTTCGAAACGCGCCGGTAAAGACGAGCGACGAATTGAATTTTGTTCACCTACACCTATACT 253 10713498 0.893785506 17 242 1867 0.942176871 2.442479769 0.068027211 0.138339921 0.258503401 253 17 0 277 X:10713434-10713525 6 CG32676 FBtr0333017|FBtr0071503 10711161|10713113 10714398|10714398 TGTGTT 6mer3-8 dme-miR-317-3p X - 10713434 10713522 3'utr CG32676 FlyBase G49963.2 TTATATATACTTTATCACCAAGAATGTGTTTCGAAACGCGCCGGTAAAGACGAGCGACGAATTGAATTTTGTTCACCTACACCTATACT 120 10713498 0.898102788 14 115 851 0.967032967 2.245512668 0.032967033 0.408333333 0.60989011 120 6 0 176 X:10713434-10713522 6 168.5 4266 FBgn0052676 977.3866667 21.50333333 32.91666667 0.172398505 7.835994419 5.118987342 0 0 0 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT X 10713644 10713650 - X_10713644_10713650_- 0.657085598 0.657518135 0.657301867 0.000305824 CG32676 FBtr0071503|FBtr0333017 10713113|10711161 10714398|10714398 X - 10713538 10713680 3'utr CG32676 FlyBase G66374.1 ACACGATCACACACACACACACCTGGCTTTGGCAGCTTTATGTTATGTTTAACTTTAATAACCGACGGCGGGCTGAATGAAAATCTGCACCAGCGACTGCGATGTGGCGCTTTAACCTAATTTGCCTTAATAGAAAATCGTTT 137 10713651 0.984223356 17 126 1046 0.924528302 1.69019608 0.044025157 0.116788321 0.238993711 137 10 2 147 X:10713538-10713680 7 CG32676 FBtr0333017|FBtr0071503 10711161|10713113 10714398|10714398 GGCAGCT 7mer-m8 dme-miR-980-3p X - 10713625 10713678 3'utr CG32676 FlyBase G49965.1 ACGATCACACACACACACACCTGGCTTTGGCAGCTTTATGTTATGTTTAACTTT 75 10713651 0.691063469 8 73 588 0.971962617 2.017033339 0.018691589 0.36 0.551401869 75 3 0 104 X:10713625-10713678 7 89 4267 FBgn0052676 977.3866667 21.50333333 32.91666667 0.091059151 4.138893195 2.703797468 1 1 1 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA X 10748666 10748671 + X_10748666_10748671_+ 1 1 1 0 ras FBtr0332294|FBtr0332294|FBtr0071494|FBtr0071494|FBtr0071495|FBtr0071495|FBtr0343043|FBtr0343043 10748202|10748202|10748202|10748202|10748202|10748202|10748202|10748202 10749097|10749097|10748806|10748806|10748806|10748806|10748806|10748806 X + 10748615 10748686 3'utr ras FlyBase G60294.1 CTTCAACTATTCGCTATATATATCTAAAGCGCAACGCGTTGGTTGGCCGCTTACTTATTTTGCACGCTATAT 13 10748657 0.989709099 7 12 119 0.928571429 0.812913357 0.357142857 0.076923077 0.142857143 13 0 1 13 X:10748615-10748686 6 ras FBtr0071495|FBtr0071495|FBtr0343043|FBtr0343043|FBtr0332294|FBtr0332294|FBtr0071494|FBtr0071494 10748202|10748202|10748202|10748202|10748202|10748202|10748202|10748202 10748806|10748806|10748806|10748806|10749097|10749097|10748806|10748806 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" X + 10748649 10748685 3'utr ras FlyBase G45573.1 CGCGTTGGTTGGCCGCTTACTTATTTTGCACGCTATA 8 10748666 0.892106905 4 7 64 0.9 0.954242509 0.1 0.25 0.4 8 1 0 9 X:10748649-10748685 6 8.5 4268 FBgn0003204 319.3466667 15.79333333 24.27333333 0.026616843 0.538201773 0.350178522 9 0 4.5 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA X 10748781 10748786 + X_10748781_10748786_+ 1 1 1 0 ras FBtr0332294|FBtr0071494|FBtr0071495|FBtr0343043 10748202|10748202|10748202|10748202 10749097|10748806|10748806|10748806 X + 10748742 10748797 3'utr ras FlyBase G60295.1 AGCTAGCTTCAAGTTTTAAAACTCTGCCAAACTTATTAAATGTGAACTGAAACTAA 12 10748781 0.958213695 7 12 62 1 1.146128036 0 0.166666667 0.285714286 12 0 0 14 X:10748742-10748797 6 ras FBtr0071495|FBtr0343043|FBtr0332294|FBtr0071494 10748202|10748202|10748202|10748202 10748806|10748806|10749097|10748806 ATGTGA 6mer3-8 dme-miR-1003-3p X + 10748773 10748801 3'utr ras FlyBase G45574.1 CTTATTAAATGTGAACTGAAACTAACTGA 9 10748781 0.634579243 5 9 51 1 1.146128036 0 0.333333333 0.571428571 9 0 0 14 X:10748773-10748801 6 8 4269 FBgn0003204 319.3466667 15.79333333 24.27333333 0.025051146 0.506542845 0.329579786 0 0 0 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA X 10760146 10760151 - X_10760146_10760151_- 0.999977626 0.999973273 0.999975449 3.04E-06 Tango5 FBtr0071501|FBtr0346377|FBtr0071499|FBtr0334457|FBtr0071500|FBtr0300569 10760046|10760046|10760046|10760046|10760046|10760046 10760485|10760485|10760485|10760485|10760485|10760485 X - 10760123 10760177 3'utr Tango5 FlyBase G66397.1 TAGTCGCGACTAATGAAAAGCAAATTGTGCAAAAGACAAACCAGCCAGAGTAAGC 42 10760153 0.869114202 4 42 110 1 1.755874856 0.157894737 0.238095238 0.438596491 42 0 0 57 X:10760123-10760177 6 Tango5 FBtr0071500|FBtr0300569|FBtr0071499|FBtr0334457|FBtr0071501|FBtr0346377 10760046|10760046|10760046|10760046|10760046|10760046 10760485|10760485|10760485|10760485|10760485|10760485 GTGCAA 6mer3-8 dme-miR-92b-3p X - 10760126 10760238 3'utr Tango5 FlyBase G49976.1 CCTTAGCAATTTTCCGTGTGAGTTCGTTTAACTAAAGTAACGAAAGTGAGGGAGACGCAGCTAGTCGCGACTAATGAAAAGCAAATTGTGCAAAAGACAAACCAGCCAGAGTA 30 10760153 0.914245324 5 29 102 0.979166667 1.371067862 0.166666667 0.333333333 0.583333333 30 0 1 47 X:10760126-10760238 6 33.5 4270 FBgn0052675 1144.95 61.17 93.45 0.02925892 0.547654079 0.358480471 2 2 2 0.1 dme-bantam-3p 6mer3-8 TGATCT X 10760456 10760461 - X_10760456_10760461_- 0.999997779 0.999993069 0.999995424 3.32E-06 Tango5 FBtr0071501|FBtr0346377|FBtr0071499|FBtr0334457|FBtr0071500|FBtr0300569 10760046|10760046|10760046|10760046|10760046|10760046 10760485|10760485|10760485|10760485|10760485|10760485 X - 10760301 10760481 3'utr Tango5 FlyBase G66399.1 TCAGTGGATCAGTCTTCTGTTGATCTTTTTCCCCAACCCTTGGTTTTCGTTTAAATTATTTTGTATATTGCGGCTTTCGCTCTTAGTCAAATGATGTATCTTATGTGAGTGTGTCGGCGAGAGAAAAGGAGACGGCGTGGAAGCCTGAGGAATTTACCATGTAGACTAGACTAGGGAAAAA 65 10760454 0.982050376 22 63 567 0.948717949 1.86923172 0.256410256 0.138461538 0.282051282 65 4 0 74 X:10760301-10760481 6 Tango5 FBtr0071500|FBtr0300569|FBtr0071499|FBtr0334457|FBtr0071501|FBtr0346377 10760046|10760046|10760046|10760046|10760046|10760046 10760485|10760485|10760485|10760485|10760485|10760485 TGATCT 6mer3-8 dme-bantam-3p X - 10760436 10760482 3'utr Tango5 FlyBase G49978.2 ATCAGTGGATCAGTCTTCTGTTGATCTTTTTCCCCAACCCTTGGTTT 26 10760461 0.6119772 7 23 280 0.875 1.243038049 0.05 0.461538462 0.65 26 4 1 35 X:10760436-10760482 6 27 4271 FBgn0052675 1144.95 61.17 93.45 0.023581816 0.44139284 0.288924559 -7 0 -3.5 0.1 dme-bantam-3p 6mer3-8 TGATCT X 10765283 10765288 - X_10765283_10765288_- 0.999996168 0.99999631 0.999996239 7.07E-08 Atg8a FBtr0346376|FBtr0346375|FBtr0071498 10764876|10764876|10764876 10765457|10765457|10765457 X - 10765258 10765367 3'utr Atg8a FlyBase G66408.1 AGCTTACAATATGGACGGCGAGTTAGCTAAACGAATTGAGGAAAACCGCAGGAAATGCCACATGAAAAGAACTTGAAATTGATCTGATACGCAGGGCAACAAAAAAAATC 193 10765289 0.968635469 12 189 1051 0.982142857 1.865301426 0.138392857 0.139896373 0.258928571 193 2 2 220 X:10765258-10765367 6 Atg8a FBtr0071498|FBtr0346375|FBtr0346376 10764876|10764876|10764876 10765457|10765457|10765457 TGATCT 6mer3-8 dme-bantam-3p X - 10765263 10765383 3'utr Atg8a FlyBase G49986.1 TTGTGTTTAGCATGCAAGCTTACAATATGGACGGCGAGTTAGCTAAACGAATTGAGGAAAACCGCAGGAAATGCCACATGAAAAGAACTTGAAATTGATCTGATACGCAGGGCAACAAAAA 86 10765289 0.970000449 13 81 461 0.953125 1.609238576 0.15625 0.38372093 0.5859375 86 4 2 122 X:10765263-10765383 6 122 4272 FBgn0052672 2319.966667 259.7 395.21 0.052586962 0.469772815 0.308696642 1 1 1 0.1 dme-miR-252-5p 6mer3-8 GTACTT X 10771103 10771108 + X_10771103_10771108_+ 0.717643552 0.555166391 0.636404971 0.11488873 BTBD9 FBtr0071497|FBtr0334456 10771071|10771071 10771699|10772154 X + 10771079 10771140 3'utr BTBD9 FlyBase G60303.1 CGCCGCTGCGGCCGATAATGTTTTGTACTTGAAATACTCCTGTGGTCTGTTAGCTGTTAGTC 44 10771127 0.686486621 11 43 388 1 1.740362689 0.236363636 0.159090909 0.327272727 44 0 0 55 X:10771079-10771140 6 BTBD9 FBtr0334456|FBtr0071497 10771071|10771071 10772154|10771699 GTACTT 6mer3-8 dme-miR-252-5p X + 10771082 10771140 3'utr BTBD9 FlyBase G45580.1 CGCTGCGGCCGATAATGTTTTGTACTTGAAATACTCCTGTGGTCTGTTAGCTGTTAGTC 23 10771127 0.988184706 8 23 216 1 1.51851394 0.333333333 0.347826087 0.545454545 23 0 0 33 X:10771082-10771140 6 13 4273 FBgn0030228 130.9633333 5.32 8.203333333 0.099264425 2.443609023 1.584721658 -24 -24 -24 0.1 dme-miR-1008-3p 6mer3-8 AGCTGT X 10771130 10771135 + X_10771130_10771135_+ 0.504790713 0.652950951 0.578870832 0.104765153 BTBD9 FBtr0071497|FBtr0334456 10771071|10771071 10771699|10772154 X + 10771079 10771140 3'utr BTBD9 FlyBase G60303.1 CGCCGCTGCGGCCGATAATGTTTTGTACTTGAAATACTCCTGTGGTCTGTTAGCTGTTAGTC 44 10771127 0.686486621 11 43 388 1 1.740362689 0.236363636 0.159090909 0.327272727 44 0 0 55 X:10771079-10771140 6 BTBD9 FBtr0334456|FBtr0071497 10771071|10771071 10772154|10771699 AGCTGT 6mer3-8 dme-miR-1008-3p X + 10771082 10771140 3'utr BTBD9 FlyBase G45580.1 CGCTGCGGCCGATAATGTTTTGTACTTGAAATACTCCTGTGGTCTGTTAGCTGTTAGTC 23 10771127 0.988184706 8 23 216 1 1.51851394 0.333333333 0.347826087 0.545454545 23 0 0 33 X:10771082-10771140 6 15.5 4274 FBgn0030228 130.9633333 5.32 8.203333333 0.118353738 2.913533835 1.889475823 3 3 3 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 10771183 10771189 + X_10771183_10771189_+ 0.54755087 0.64658709 0.59706898 0.070029169 BTBD9 FBtr0071497|FBtr0334456 10771071|10771071 10771699|10772154 X + 10771149 10771230 3'utr BTBD9 FlyBase G60304.1 TAGTTATATTTTGCAGACCGTGCTGCTCTTGTTATCTAGTCCTTCCCAGTGCCCCAATGCTTGGTGGTTCCAAAACCTGTGC 92 10771191 0.753327288 17 85 889 0.91509434 1.50965048 0.103773585 0.152173913 0.264150943 92 7 2 97 X:10771149-10771230 7 BTBD9 FBtr0334456|FBtr0071497 10771071|10771071 10772154|10771699 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X + 10771158 10771281 3'utr BTBD9 FlyBase G45581.1 TTTGCAGACCGTGCTGCTCTTGTTATCTAGTCCTTCCCAGTGCCCCAATGCTTGGTGGTTCCAAAACCTGTGCATTGCATATTGGTTTTGCGTTATTACCTTCGTTATATACTATATGTATATA 72 10771191 0.742343001 16 63 716 0.903508772 2.012837225 0.254385965 0.361111111 0.596491228 72 11 0 103 X:10771158-10771281 7 62 4275 FBgn0030228 130.9633333 5.32 8.203333333 0.473414951 11.65413534 7.557903291 -8 -8 -8 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 10771321 10771326 + X_10771321_10771326_+ 0.999999994 0.999999882 0.999999938 7.07E-08 BTBD9 FBtr0071497|FBtr0071497|FBtr0071497|FBtr0334456|FBtr0334456|FBtr0334456 10771071|10771071|10771071|10771071|10771071|10771071 10771699|10771699|10771699|10772154|10772154|10772154 X + 10771304 10771400 3'utr BTBD9 FlyBase G60306.1 TGTTTTTATAATTTTATTGTGATCCAAAAATAATTCCTTATGTTTGCAAGGCAGCAGAGTTATTTATATAAGCAATATAACTGAATTCTATGCACAC 31 10771319 0.98590632 14 31 258 1 1.591064607 0.025641026 0.193548387 0.358974359 31 0 0 39 X:10771304-10771400 6 BTBD9 FBtr0334456|FBtr0334456|FBtr0334456|FBtr0071497|FBtr0071497|FBtr0071497 10771071|10771071|10771071|10771071|10771071|10771071 10772154|10772154|10772154|10771699|10771699|10771699 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X + 10771309 10771349 3'utr BTBD9 FlyBase G45582.1 TTATAATTTTATTGTGATCCAAAAATAATTCCTTATGTTTG 21 10771320 0.971924366 5 19 169 0.846153846 0.643452676 0.038461538 0.238095238 0.384615385 21 0 4 22 X:10771309-10771349 6 20.5 4276 FBgn0030228 130.9633333 5.32 8.203333333 0.156532363 3.853383459 2.498984153 2 1 1.5 0.1 dme-miR-970-3p 6mer2-7 CTTATG X 10771544 10771549 + X_10771544_10771549_+ 0.999999998 0.999868039 0.999934018 9.33E-05 BTBD9 FBtr0071497|FBtr0334456 10771071|10771071 10771699|10772154 X + 10771460 10771567 3'utr BTBD9 FlyBase G60307.1 GCGAACTCGAATGCGATTTCCGAGCAGCTGAACCAAAATTGTATACGATATCCGATCGCATAGTATAAATCTGTACTGTCTAGCCTTATGTCCGGTCCATGTCCTTGT 18 10771550 0.97930014 12 18 122 1 1.342422681 0.181818182 0.222222222 0.363636364 18 0 0 22 X:10771460-10771567 6 BTBD9 FBtr0334456|FBtr0071497 10771071|10771071 10772154|10771699 CTTATG 6mer2-7 dme-miR-970-3p X + 10771510 10771564 3'utr BTBD9 FlyBase G45584.1 TCCGATCGCATAGTATAAATCTGTACTGTCTAGCCTTATGTCCGGTCCATGTCCT 12 10771549 0.738930404 6 9 92 0.8125 0.812913357 0.25 0.25 0.4375 12 2 1 13 X:10771510-10771564 6 8.5 4277 FBgn0030228 130.9633333 5.32 8.203333333 0.064903663 1.597744361 1.036164161 -6 -5 -5.5 0.1 dme-bantam-3p 6mer3-8 TGATCT X 10781452 10781457 - X_10781452_10781457_- 0.99999766 0.999996909 0.999997284 5.66E-07 sesB FBtr0346384|FBtr0073423|FBtr0073422|FBtr0073421|FBtr0073424 10780991|10780991|10780991|10780991|10780891 10781620|10781620|10781620|10781620|10781620 X - 10781421 10781490 5'utr sesB FlyBase G66417.1 AGCAATAGCAACAGCAAAGGCATAAGCTAAGTTTGATCTGCAACCAACACCTCTTACCACGAACAACGGC 77 10781458 0.970164408 7 70 427 0.920454545 1.431363764 0.125 0.116883117 0.227272727 77 5 2 81 X:10781421-10781490 6 sesB FBtr0073424|FBtr0346384|FBtr0073423|FBtr0073422|FBtr0073421 10780891|10780991|10780991|10780991|10780991 10781620|10781620|10781620|10781620|10781620 TGATCT 6mer3-8 dme-bantam-3p X - 10781425 10781479 5'utr sesB FlyBase G49996.1 CAGCAAAGGCATAAGCTAAGTTTGATCTGCAACCAACACCTCTTACCACGAACAA 21 10781457 0.910193931 6 21 118 1 1.602059991 0.025 0.476190476 0.725 21 0 0 40 X:10781425-10781479 6 46.5 4278 FBgn0003360 11391.58667 829.71 1277.313333 0.00408196 0.056043678 0.036404537 1 0 0.5 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA X 10789474 10789479 - X_10789474_10789479_- 1.000000001 0.973949507 0.986974754 0.018420485 Imp FBtr0073414 10787867 10797068 X - 10789415 10789520 3'utr Imp FlyBase G66428.1 TGTTAAGTTCATTTAATCTACACATAATCTACATGAGGATGATGTGACGACACCAGATGTATCTACACTGTACATTGTATCTACATTACAGAGCTAAAATATCTAT 77 10789463 0.856936689 20 70 509 0.917525773 1.949390007 0.144329897 0.181818182 0.350515464 77 8 0 89 X:10789415-10789520 6 Imp FBtr0073414 10787867 10797068 ATGTGA 6mer3-8 dme-miR-1003-3p X - 10789422 10789571 3'utr Imp FlyBase G50008.1 ATCTTTACCTAAATTAGTTTAGAGCTTTTTTTTGCGTCGTCTACATTTTACTGTTAAGTTCATTTAATCTACACATAATCTACATGAGGATGATGTGACGACACCAGATGTATCTACACTGTACATTGTATCTACATTACAGAGCTAAAA 55 10789463 0.971180952 19 54 324 0.989130435 1.658011397 0.184782609 0.472727273 0.684782609 55 0 1 91 X:10789422-10789571 6 40.5 4279 FBgn0262735 4183.533333 61.35 94.29666667 0.009680812 0.660146699 0.429495564 -16 -16 -16 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 10789827 10789833 - X_10789827_10789833_- 0.801961356 0.801958197 0.801959776 2.26E-06 Imp FBtr0073414|FBtr0073414|FBtr0073414 10787867|10787867|10787867 10797068|10797068|10797068 X - 10789758 10789879 3'utr Imp FlyBase G66431.1 AATCAGACCTCCCCCCTTCTCACTTCTCCAGCGCCTGGTTTGCCTGTGTGATAGTAGTTTATAATTAAAACCATCCGCTGGGCACCCAACTCCCCTCATGGGACCTTAAGCAGTCCCCCCCC 295 10789835 0.989768634 24 281 2760 0.955621302 1.810232518 0.056213018 0.13220339 0.24260355 295 11 4 323 X:10789758-10789879 7 Imp FBtr0073414|FBtr0073414|FBtr0073414 10787867|10787867|10787867 10797068|10797068|10797068 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 10789773 10789878 3'utr Imp FlyBase G50009.1 ATCAGACCTCCCCCCTTCTCACTTCTCCAGCGCCTGGTTTGCCTGTGTGATAGTAGTTTATAATTAAAACCATCCGCTGGGCACCCAACTCCCCTCATGGGACCTT 211 10789835 0.840990894 17 195 2016 0.945619335 1.650446298 0.039274924 0.421800948 0.63141994 211 12 6 313 X:10789773-10789878 7 223.5 4280 FBgn0262735 4183.533333 61.35 94.29666667 0.053423741 3.643031785 2.370179222 2 2 2 0.1 dme-miR-283-5p 6mer3-8 TGATAT X 10790068 10790073 - X_10790068_10790073_- 0.978182981 0.817091187 0.897637084 0.113909104 Imp FBtr0073414 10787867 10797068 X - 10790044 10790196 3'utr Imp FlyBase G66433.1 CTATAAAAAAAATAAGCATGCATAACGCTATATAAATTATAAATCGATAAGCCTGGCGTTGCGTAGTCAGTTTATTGCATTTTATTTGGCATATTGAAAAATGATTTCCGTTTTATCTTCCGTTGATATCTTACTACCCATATGGGAATCAAT 39 10790074 0.930515854 19 38 332 0.978723404 1.662757832 0.063829787 0.153846154 0.29787234 39 1 0 46 X:10790044-10790196 6 Imp FBtr0073414 10787867 10797068 TGATAT 6mer3-8 dme-miR-283-5p X - 10790046 10790093 3'utr Imp FlyBase G50011.1 ATTTCCGTTTTATCTTCCGTTGATATCTTACTACCCATATGGGAATCA 9 10790078 0.87405786 6 9 92 1 1.113943352 0 0.333333333 0.538461538 9 0 0 13 X:10790046-10790093 6 11 4281 FBgn0262735 4183.533333 61.35 94.29666667 0.002629356 0.179299104 0.116653116 1 5 3 0.1 dme-miR-277-3p 7mer-m8 TGCATTT X 10790115 10790121 - X_10790115_10790121_- 0.614837636 0.620178422 0.617508029 0.003776516 Imp FBtr0073414 10787867 10797068 X - 10790044 10790196 3'utr Imp FlyBase G66433.1 CTATAAAAAAAATAAGCATGCATAACGCTATATAAATTATAAATCGATAAGCCTGGCGTTGCGTAGTCAGTTTATTGCATTTTATTTGGCATATTGAAAAATGATTTCCGTTTTATCTTCCGTTGATATCTTACTACCCATATGGGAATCAAT 39 10790122 0.930515854 19 38 332 0.978723404 1.662757832 0.063829787 0.153846154 0.29787234 39 1 0 46 X:10790044-10790196 7 Imp FBtr0073414 10787867 10797068 TGCATTT 7mer-m8 dme-miR-277-3p X - 10790106 10790159 3'utr Imp FlyBase G50012.1 TATAAATCGATAAGCCTGGCGTTGCGTAGTCAGTTTATTGCATTTTATTTGGCA 11 10790122 0.885268022 2 9 94 0.941176471 1.204119983 0.176470588 0.363636364 0.588235294 11 1 0 16 X:10790106-10790159 7 7 4282 FBgn0262735 4183.533333 61.35 94.29666667 0.001673227 0.11409943 0.074233801 1 1 1 0.1 dme-miR-14-3p 7mer-A1 AGACTGA X 10790375 10790381 - X_10790375_10790381_- 0.823305006 0.823290572 0.823297789 1.02E-05 Imp FBtr0073414 10787867 10797068 X - 10790300 10790418 3'utr Imp FlyBase G66434.1 TTCGATTTGTAATAGATTATATACGGTAATCAACTGGAGACTGAGCTACAACATATATTTAGTTACCGTTATATTTATTGCAGAGACACACACACATACATACACTAACACCAACCCCA 745 10790385 0.972319165 25 680 3989 0.913142857 1.94830427 0.138285714 0.139597315 0.267428571 745 68 8 799 X:10790300-10790418 7 Imp FBtr0073414 10787867 10797068 AGACTGA 7mer-A1 dme-miR-14-3p X - 10790333 10790415 3'utr Imp FlyBase G50014.1 GATTTGTAATAGATTATATACGGTAATCAACTGGAGACTGAGCTACAACATATATTTAGTTACCGTTATATTTATTGCAGAGA 546 10790385 0.718578684 21 493 2844 0.923255814 1.945577993 0.197674419 0.41025641 0.625581395 546 58 8 794 X:10790333-10790415 7 555.5 4283 FBgn0262735 4183.533333 61.35 94.29666667 0.132782496 9.054604727 5.890982361 4 4 4 0.1 dme-miR-277-3p 6mer3-8 TGCATT X 10790655 10790660 - X_10790655_10790660_- 0.999935539 0.99957056 0.999753049 0.000258023 Imp FBtr0073414 10787867 10797068 X - 10790635 10790691 3'utr Imp FlyBase G66436.1 AATGCATTAAAATGTTGTATGATGTAGACTATGCATTGGAACGAAACGAAACGAAAC 38 10790667 0.98417967 5 37 292 1 1.672097858 0.425531915 0.189189189 0.361702128 37 0 0 47 X:10790635-10790691 6 Imp FBtr0073414 10787867 10797068 TGCATT 6mer3-8 dme-miR-277-3p X - 10790643 10790728 3'utr Imp FlyBase G50016.1 ATATTGTATATGTACAATAGCAACAACGCAACATCAAAATGCATTAAAATGTTGTATGATGTAGACTATGCATTGGAACGAAACGA 20 10790667 0.980208271 6 20 141 1 1.462397998 0.137931034 0.45 0.620689655 20 0 0 29 X:10790643-10790728 6 26.5 4284 FBgn0262735 4183.533333 61.35 94.29666667 0.006334359 0.43194784 0.281027961 7 7 7 0.1 dme-miR-184-5p 6mer2-7 GATAAG X 10790847 10790852 - X_10790847_10790852_- 0.999711313 0.999782011 0.999746662 5.00E-05 Imp FBtr0073416|FBtr0073414 10790803|10787867 10797068|10797068 X - 10790827 10790870 3'utr Imp FlyBase G66437.1 GAAACCCAAAAAAAAAGCGATAAGCATGAACTAAAAACACCCAA 11 10790850 0.949449359 2 11 22 1 1.113943352 0.076923077 0.181818182 0.307692308 11 0 0 13 X:10790827-10790870 6 Imp FBtr0073416|FBtr0073414 10790803|10787867 10797068|10797068 GATAAG 6mer2-7 dme-miR-184-5p X - 10790825 10790859 3'utr Imp FlyBase G50017.1 AAAAAGCGATAAGCATGAACTAAAAACACCCAACA 6 10790849 0.7976646 2 6 12 1 0.903089987 0 0.333333333 0.5 6 0 0 8 X:10790825-10790859 6 8.5 4285 FBgn0262735 4183.533333 61.35 94.29666667 0.002031775 0.138549307 0.090141044 -2 -3 -2.5 0.1 dme-miR-263a-5p 6mer3-8 GTGCCA X 10792594 10792599 - X_10792594_10792599_- 0.95595526 0.928148211 0.942051735 0.019662589 Imp FBtr0073418|FBtr0073416|FBtr0073414 10792506|10790803|10787867 10797068|10797068|10797068 X - 10792551 10792631 3'utr Imp FlyBase G66439.1 AATGAGAAAAGTACTTTTTTGTGTTGTAAGTTGTGCCAAGTACTGATAACGTTTAAGGTGTGATAAACTCGTTTTTAAATT 36 10792600 0.850214232 12 35 287 0.97826087 1.653212514 0.130434783 0.277777778 0.434782609 36 1 0 45 X:10792551-10792631 6 Imp FBtr0073416|FBtr0073414|FBtr0073418 10790803|10787867|10792506 10797068|10797068|10797068 GTGCCA 6mer3-8 dme-miR-263a-5p X - 10792539 10792623 3'utr Imp FlyBase G50020.1 AAGTACTTTTTTGTGTTGTAAGTTGTGCCAAGTACTGATAACGTTTAAGGTGTGATAAACTCGTTTTTAAATTTAACAACTATTT 34 10792591 0.983330066 10 32 259 0.94 1.672097858 0.34 0.352941176 0.56 34 3 0 47 X:10792539-10792623 6 25 4286 FBgn0262735 4183.533333 61.35 94.29666667 0.00597581 0.407497963 0.265120718 1 -8 -3.5 0.1 dme-miR-282-5p 8mer-A1 AGAGGCTA X 10793075 10793082 - X_10793075_10793082_- 0.637906238 0.637905722 0.63790598 3.54E-07 Imp FBtr0073418|FBtr0073416|FBtr0073414 10792506|10790803|10787867 10797068|10797068|10797068 X - 10793016 10793165 3'utr Imp FlyBase G66440.1 AGAGAACTCAGTTTGAAGAACGAAGAAAGAAAAGCGATTGTGAGTTGTGTGAAAAGCAGAAACGAAATTATTTTTTAGTATTTAGAGGCTATTTTATATCGTTATTAAAGCAGGTAGGCAAGTGAGGCAACGGTTAGGAAAAAAAGGAAG 235 10793083 0.984308871 24 222 1734 0.949090909 2.416640507 0.141818182 0.157446809 0.28 235 14 0 261 X:10793016-10793165 8 Imp FBtr0073416|FBtr0073414|FBtr0073418 10790803|10787867|10792506 10797068|10797068|10797068 AGAGGCTA 8mer-A1 dme-miR-282-5p X - 10793013 10793184 3'utr Imp FlyBase G50021.1 TAATGATAATGATGTAGAAAGAGAACTCAGTTTGAAGAACGAAGAAAGAAAAGCGATTGTGAGTTGTGTGAAAAGCAGAAACGAAATTATTTTTTAGTATTTAGAGGCTATTTTATATCGTTATTAAAGCAGGTAGGCAAGTGAGGCAACGGTTAGGAAAAAAAGGAAGTGA 196 10793083 0.987128278 29 181 1389 0.928082192 1.955848036 0.157534247 0.336734694 0.554794521 196 19 2 271 X:10793013-10793184 8 82.5 4287 FBgn0262735 4183.533333 61.35 94.29666667 0.019720173 1.344743276 0.87489837 1 1 1 0.1 dme-miR-307a-3p 6mer2-7 GTTGTG X 10793117 10793122 - X_10793117_10793122_- 0.892659555 0.982464744 0.937562149 0.063501795 Imp FBtr0073418|FBtr0073416|FBtr0073414 10792506|10790803|10787867 10797068|10797068|10797068 X - 10793016 10793165 3'utr Imp FlyBase G66440.1 AGAGAACTCAGTTTGAAGAACGAAGAAAGAAAAGCGATTGTGAGTTGTGTGAAAAGCAGAAACGAAATTATTTTTTAGTATTTAGAGGCTATTTTATATCGTTATTAAAGCAGGTAGGCAAGTGAGGCAACGGTTAGGAAAAAAAGGAAG 235 10793122 0.984308871 24 222 1734 0.949090909 2.416640507 0.141818182 0.157446809 0.28 235 14 0 261 X:10793016-10793165 6 Imp FBtr0073416|FBtr0073414|FBtr0073418 10790803|10787867|10792506 10797068|10797068|10797068 GTTGTG 6mer2-7 dme-miR-307a-3p X - 10793013 10793184 3'utr Imp FlyBase G50021.1 TAATGATAATGATGTAGAAAGAGAACTCAGTTTGAAGAACGAAGAAAGAAAAGCGATTGTGAGTTGTGTGAAAAGCAGAAACGAAATTATTTTTTAGTATTTAGAGGCTATTTTATATCGTTATTAAAGCAGGTAGGCAAGTGAGGCAACGGTTAGGAAAAAAAGGAAGTGA 196 10793121 0.987128278 29 181 1389 0.928082192 1.955848036 0.157534247 0.336734694 0.554794521 196 19 2 271 X:10793013-10793184 6 72 4288 FBgn0262735 4183.533333 61.35 94.29666667 0.017210333 1.173594132 0.763547669 0 -1 -0.5 0.1 dme-miR-1003-3p 6mer2-7 TGTGAG X 10793222 10793227 - X_10793222_10793227_- 0.999585197 0.999988542 0.999786869 0.000285176 Imp FBtr0073418|FBtr0073416|FBtr0073414 10792506|10790803|10787867 10797068|10797068|10797068 X - 10793198 10793266 3'utr Imp FlyBase G66441.1 ATAAATGAGGATAAAGATCGAGGTAACAACTAAAAAACTTGTGAGTTAGCGTGCGCGTTAAAAACGAAA 14 10793221 0.973597046 5 14 80 1 1.146128036 0.071428571 0 0 14 0 0 14 X:10793198-10793266 6 Imp FBtr0073416|FBtr0073414|FBtr0073418 10790803|10787867|10792506 10797068|10797068|10797068 TGTGAG 6mer2-7 dme-miR-1003-3p X - 10793203 10793260 3'utr Imp FlyBase G50022.1 GAGGATAAAGATCGAGGTAACAACTAAAAAACTTGTGAGTTAGCGTGCGCGTTAAAAA 14 10793221 0.969164241 4 14 73 1 1.380211242 0.208333333 0.357142857 0.625 14 0 0 24 X:10793203-10793260 6 12 4289 FBgn0262735 4183.533333 61.35 94.29666667 0.002868389 0.195599022 0.127257945 -6 -6 -6 0.1 dme-bantam-3p 6mer3-8 TGATCT X 10793754 10793759 - X_10793754_10793759_- 0.999776607 0.999791549 0.999784078 1.05E-05 Imp FBtr0073418|FBtr0073416|FBtr0073414 10792506|10790803|10787867 10797068|10797068|10797068 X - 10793746 10793784 3'utr Imp FlyBase G66442.1 AAGAATGTTGCTGGGCATTTACCATTGATCTTTATATAC 10 10793760 0.612909663 4 7 108 0.75 0.954242509 0.25 0.2 0.333333333 10 3 0 9 X:10793746-10793784 6 Imp FBtr0073416|FBtr0073414|FBtr0073418 10790803|10787867|10792506 10797068|10797068|10797068 TGATCT 6mer3-8 dme-bantam-3p X - 10793740 10793781 3'utr Imp FlyBase G50024.1 AATGTTGCTGGGCATTTACCATTGATCTTTATATACGAGTAT 7 10793760 0.751734379 4 7 78 1 0.954242509 0.222222222 0.285714286 0.444444444 7 0 0 9 X:10793740-10793781 6 8 4290 FBgn0262735 4183.533333 61.35 94.29666667 0.001912259 0.130399348 0.08483863 1 1 1 0.1 dme-miR-278-3p 6mer3-8 CCCACC X 10793889 10793894 - X_10793889_10793894_- 0.990301737 0.999999999 0.995150868 0.006857734 Imp FBtr0073418|FBtr0073416|FBtr0073414 10792506|10790803|10787867 10797068|10797068|10797068 X - 10793786 10793897 3'utr Imp FlyBase G66442.2 CTCCCCACCCAGACCATATGTACCATACCAACTGAAGCAGATCAACCAAGAACTGAGGGATATAGGAGATATAGGAGCCAGGAAGTGATTAGGATGGGATGGGAGGTGTATA 22 10793872 0.874663454 9 19 78 0.869565217 1.301029996 0.086956522 0.045454545 0.086956522 22 3 0 20 X:10793786-10793897 6 Imp FBtr0073416|FBtr0073414|FBtr0073418 10790803|10787867|10792506 10797068|10797068|10797068 CCCACC 6mer3-8 dme-miR-278-3p X - 10793824 10793915 3'utr Imp FlyBase G50025.1 TTTTGGGTCGAACTCGAACTCCCCACCCAGACCATATGTACCATACCAACTGAAGCAGATCAACCAAGAACTGAGGGATATAGGAGATATAG 11 10793877 0.675730331 10 11 43 1 1.146128036 0 0.272727273 0.428571429 11 0 0 14 X:10793824-10793915 6 3.5 4291 FBgn0262735 4183.533333 61.35 94.29666667 0.000836613 0.057049715 0.037116901 -22 -17 -19.5 0.1 dme-miR-304-5p 7mer-m8 TGAGATT X 10796118 10796124 - X_10796118_10796124_- 0.620150303 0.620132418 0.62014136 1.27E-05 Imp FBtr0073418|FBtr0305150|FBtr0346315|FBtr0073415|FBtr0073416|FBtr0073414|FBtr0073413|FBtr0301409|FBtr0305149|FBtr0073420|FBtr0073417 10792506|10795995|10795995|10794336|10790803|10787867|10795435|10795995|10795995|10795995|10795995 10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068 X - 10796102 10796197 3'utr Imp FlyBase G66447.2 TTTTTAACAAAGATTTAGTAAGCTTACATTTAAGTGGAATGAATAGAAGAGAAGTGAGCAAAGCGTAAGAGAATGAGATTGAGAATCAATTTAAAA 182 10796124 0.926608973 8 178 652 0.981308411 1.84509804 0.191588785 0.148351648 0.275700935 182 2 2 210 X:10796102-10796197 7 Imp FBtr0301409|FBtr0073420|FBtr0073416|FBtr0305149|FBtr0073417|FBtr0073414|FBtr0073413|FBtr0346315|FBtr0073415|FBtr0073418|FBtr0305150 10795995|10795995|10790803|10795995|10795995|10787867|10795435|10795995|10794336|10792506|10795995 10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068 TGAGATT 7mer-m8 dme-miR-304-5p X - 10796111 10796166 3'utr Imp FlyBase G50028.1 AAGTGGAATGAATAGAAGAGAAGTGAGCAAAGCGTAAGAGAATGAGATTGAGAATC 110 10796124 0.925280572 3 109 380 0.994117647 2.227886705 0.2 0.354545455 0.582352941 110 1 0 169 X:10796111-10796166 7 140.5 4292 FBgn0262735 4183.533333 61.35 94.29666667 0.033584052 2.290138549 1.489978437 0 0 0 0.1 dme-miR-1007-3p 6mer3-8 TGAGCT X 10796708 10796713 - X_10796708_10796713_- 0.99997189 0.999955869 0.999963879 1.13E-05 Imp FBtr0073418|FBtr0305150|FBtr0346315|FBtr0073415|FBtr0073416|FBtr0073419|FBtr0073414|FBtr0073413|FBtr0301409|FBtr0305149|FBtr0073420|FBtr0073417 10792506|10795995|10795995|10794336|10790803|10796211|10787867|10795435|10795995|10795995|10795995|10795995 10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068 X - 10796710 10796767 3'utr Imp FlyBase G66450.1 CATAAGCAAAATTTTACGCATATAGAACTGTAGGGGAACCACCACATCAAAAAGTGAG 11 10796739 0.930532633 7 9 44 0.833333333 1 0.083333333 0.090909091 0.166666667 11 2 0 10 X:10796710-10796767 3 Imp FBtr0301409|FBtr0073420|FBtr0073416|FBtr0305149|FBtr0073419|FBtr0073417|FBtr0073414|FBtr0073413|FBtr0346315|FBtr0073415|FBtr0073418|FBtr0305150 10795995|10795995|10790803|10795995|10796211|10795995|10787867|10795435|10795995|10794336|10792506|10795995 10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068 TGAGCT 6mer3-8 dme-miR-1007-3p X - 10796685 10796764 3'utr Imp FlyBase G50032.1 AAGCAAAATTTTACGCATATAGAACTGTAGGGGAACCACCACATCAAAAAGTGAGCTGCGTGAAGAGCTCTACTAGTTCA 10 10796721 0.862987187 6 9 27 1 1.176091259 0.133333333 0.4 0.6 10 0 0 15 X:10796685-10796764 6 1.5 4293 FBgn0262735 4183.533333 61.35 94.29666667 0.000358549 0.024449878 0.015907243 26 8 17 0.1 dme-miR-999-3p 6mer3-8 AGTTAA X 10833187 10833192 - X_10833187_10833192_- 0.998708652 0.970738764 0.984723708 0.019777706 sbr FBtr0073411 10832750 10833508 X - 10833181 10833229 3'utr sbr FlyBase G66467.1 GAGGCCAGGACGAGTCTGCGAACGGTAGTCCCTTTAGAGTTAAAGTTGT 26 10833197 0.981945445 5 18 158 0.666666667 1 0.433333333 0.115384615 0.233333333 26 9 1 20 X:10833181-10833229 6 sbr FBtr0073411 10832750 10833508 AGTTAA 6mer3-8 dme-miR-999-3p X - 10833156 10833229 3'utr sbr FlyBase G50044.1 GAGGCCAGGACGAGTCTGCGAACGGTAGTCCCTTTAGAGTTAAAGTTGTTTTAGATTCCTAAGCCAAACACCTT 27 10833197 0.981742567 5 24 184 0.948717949 1.568201724 0.307692308 0.37037037 0.564102564 27 2 0 37 X:10833156-10833229 6 12.5 4294 FBgn0003321 977.3433333 36.05 55.19 0.012789774 0.346740638 0.226490306 5 5 5 0.1 dme-miR-276a-3p 6mer3-8 AGTTCC X 10833255 10833260 - X_10833255_10833260_- 0.905275491 0.618118908 0.7616972 0.203050379 sbr FBtr0073411 10832750 10833508 X - 10833234 10833286 3'utr sbr FlyBase G66468.1 TCGATAGATTAGTTTAGCTCTCTTTAAGTTCCGTCCGCAGATCCGCTGGTCTA 10 10833258 0.775412459 4 10 84 1 1.079181246 0.083333333 0.2 0.333333333 10 0 0 12 X:10833234-10833286 6 sbr FBtr0073411 10832750 10833508 AGTTCC 6mer3-8 dme-miR-276a-3p X - 10833235 10833316 3'utr sbr FlyBase G50045.1 CGGGCAATGTGCATCAACGATCACAGTTCTTCGATAGATTAGTTTAGCTCTCTTTAAGTTCCGTCCGCAGATCCGCTGGTCT 11 10833258 0.987117343 5 9 75 0.8 1.079181246 0.133333333 0.272727273 0.466666667 11 3 0 12 X:10833235-10833316 6 7.5 4295 FBgn0003321 977.3433333 36.05 55.19 0.007673864 0.208044383 0.135894184 -2 -2 -2 0.1 dme-miR-307a-3p 6mer2-7 GTTGTG X 10833355 10833360 - X_10833355_10833360_- 0.946346881 0.952144892 0.949245886 0.004099805 sbr FBtr0073411 10832750 10833508 X - 10833333 10833377 3'utr sbr FlyBase G66469.1 TATTATTAAGCTGCGAAGTTGTGTGCACATTCGGGCAGTAGCAAT 21 10833356 0.745220811 2 20 129 1 1.431363764 0.111111111 0.238095238 0.407407407 21 0 0 27 X:10833333-10833377 6 sbr FBtr0073411 10832750 10833508 GTTGTG 6mer2-7 dme-miR-307a-3p X - 10833336 10833380 3'utr sbr FlyBase G50046.1 TAATATTATTAAGCTGCGAAGTTGTGTGCACATTCGGGCAGTAGC 18 10833356 0.71027996 2 18 107 1 1.414973348 0.269230769 0.333333333 0.538461538 18 0 0 26 X:10833336-10833380 6 19 4296 FBgn0003321 977.3433333 36.05 55.19 0.019440456 0.52704577 0.344265265 -4 -4 -4 0.1 dme-miR-79-3p 8mer-A1 TAGCTTTA X 10862879 10862886 + X_10862879_10862886_+ 0.625361963 0.625362919 0.625362441 6.36E-07 CG2186 FBtr0073381|FBtr0332961 10862782|10862782 10863580|10866246 X + 10862817 10862980 3'utr CG2186 FlyBase G60340.1 TATAACTATTATCGATTATAGATGTACGACGATGATGGGGAGTAGTGCAGTAAGCAGTACTTTAGCTTTAAGGTAAAAAGTTATAAATAGTTGAGCTTTCTTTATAAATAGCGGATTATACATATATCTAGATGTCATGTAATTGGTGGGTGTGCGTGAGGGTC 22 10862878 0.98390638 12 21 179 0.966666667 1.161368002 0.1 0.272727273 0.466666667 22 0 1 29 X:10862817-10862980 8 CG2186 FBtr0073381|FBtr0332961 10862782|10862782 10863580|10866246 TAGCTTTA 8mer-A1 dme-miR-79-3p X + 10862810 10862944 3'utr CG2186 FlyBase G45607.1 AGTTTTCTATAACTATTATCGATTATAGATGTACGACGATGATGGGGAGTAGTGCAGTAAGCAGTACTTTAGCTTTAAGGTAAAAAGTTATAAATAGTTGAGCTTTCTTTATAAATAGCGGATTATACATATATC 27 10862878 0.993591984 11 26 200 1 1.643452676 0.386363636 0.481481481 0.681818182 27 0 0 44 X:10862810-10862944 8 10 4297 FBgn0030243 1064.863333 20.89333333 32.09 0.009390876 0.47862157 0.311623559 1 1 1 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC X 10863491 10863497 + X_10863491_10863497_+ 0.655231362 0.655451327 0.655341345 0.000155493 CG2186 FBtr0073381|FBtr0332961 10862782|10862782 10863580|10866246 X + 10863438 10863545 3'utr CG2186 FlyBase G60345.1 ATTTTATACATTGTGCCCCGTTGATTGTAAATGAAATTTATTGTCTGTCCTGTTGTGTTCTTTGTAACTACTATAAACCACATACGAAACTATGTTAGCTTGTGAACT 88 10863490 0.790500796 16 87 1048 0.99047619 2.017033339 0.295238095 0.113636364 0.257142857 88 1 0 104 X:10863438-10863545 7 CG2186 FBtr0073381|FBtr0332961 10862782|10862782 10863580|10866246 TGTGTTC 7mer-m8 dme-miR-317-3p X + 10863443 10863512 3'utr CG2186 FlyBase G45611.1 ATACATTGTGCCCCGTTGATTGTAAATGAAATTTATTGTCTGTCCTGTTGTGTTCTTTGTAACTACTATA 49 10863490 0.992978706 6 49 582 1 1.838849091 0.231884058 0.285714286 0.492753623 49 0 0 69 X:10863443-10863512 7 61 4298 FBgn0030243 1064.863333 20.89333333 32.09 0.057284346 2.919591576 1.900903708 1 1 1 0.1 dme-miR-304-5p 6mer2-7 GAGATT X 10864011 10864016 + X_10864011_10864016_+ 1 0.999999985 0.999999992 0 CG2186 FBtr0332961 10862782 10866246 X + 10863981 10864040 3'utr CG2186 FlyBase G60349.1 TCGAAGATAATGCGAAATGCCTAGACTAAAGAGATTGTTAAATTATTGCCACTCCCGCTC 7 10864017 0.986355677 5 5 40 0.75 0.77815125 0.25 0.142857143 0.25 7 2 0 6 X:10863981-10864040 6 CG2186 FBtr0332961 10862782 10866246 GAGATT 6mer2-7 dme-miR-304-5p X + 10863978 10864037 3'utr CG2186 FlyBase G45613.1 GCGTCGAAGATAATGCGAAATGCCTAGACTAAAGAGATTGTTAAATTATTGCCACTCCCG 8 10864017 0.971664377 4 6 41 0.933333333 1.146128036 0.466666667 0.625 0.8 8 1 0 14 X:10863978-10864037 6 5.5 4299 FBgn0030243 1064.863333 20.89333333 32.09 0.005164982 0.263241863 0.171392957 -6 -6 -6 0.1 dme-miR-79-3p 7mer-m8 TAGCTTT X 10864685 10864691 + X_10864685_10864691_+ 0.620203242 0.620203726 0.620203484 3.54E-07 CG2186 FBtr0332961 10862782 10866246 X + 10864577 10864735 3'utr CG2186 FlyBase G60353.1 AATATGATATAATATATGGATTAATAAAAACCAATTATACCACGTGCACACATAAAAGCGTGCGGCAGCATAACTGTATAAACATCTAAAAATTATTCCAAGTGATTTTAGCTTTTTAAGAACCAAGTCGAAACAAACTGAACACTCGTAGTGGAAAAC 56 10864683 0.989285765 14 56 530 1 1.819543936 0.151515152 0.160714286 0.287878788 56 0 0 66 X:10864577-10864735 7 CG2186 FBtr0332961 10862782 10866246 TAGCTTT 7mer-m8 dme-miR-79-3p X + 10864661 10864735 3'utr CG2186 FlyBase G45616.1 TCTAAAAATTATTCCAAGTGATTTTAGCTTTTTAAGAACCAAGTCGAAACAAACTGAACACTCGTAGTGGAAAAC 37 10864683 0.99987835 6 35 353 0.944444444 1.707570176 0.12962963 0.378378378 0.574074074 37 3 0 51 X:10864661-10864735 7 38 4300 FBgn0030243 1064.863333 20.89333333 32.09 0.035685331 1.818761966 1.184169523 2 2 2 0.1 dme-miR-308-3p 8mer-m1 CTGTGATT X 10864799 10864806 + X_10864799_10864806_+ 0.385560641 0.385560641 0.385560641 0 CG2186 FBtr0332961 10862782 10866246 X + 10864760 10864823 3'utr CG2186 FlyBase G60354.1 AAACAAAAATTGAAATGATTCCAATTTGCAAATCCGAGTCTGTGATTATTTTTATATTATTCTT 44 10864798 0.988869372 12 44 416 1 1.763427994 0 0.25 0.431034483 44 0 0 58 X:10864760-10864823 8 CG2186 FBtr0332961 10862782 10866246 CTGTGATT 8mer-m1 dme-miR-308-3p X + 10864776 10864815 3'utr CG2186 FlyBase G45617.1 GATTCCAATTTGCAAATCCGAGTCTGTGATTATTTTTATA 32 10864798 0.75912235 10 29 304 0.872340426 1.311753861 0 0.28125 0.510638298 32 5 1 41 X:10864776-10864815 8 36 4301 FBgn0030243 1064.863333 20.89333333 32.09 0.033807155 1.723037652 1.121844811 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 10865093 10865099 + X_10865093_10865099_+ 0.793348888 0.800414732 0.79688181 0.004996275 CG2186 FBtr0332961|FBtr0332961|FBtr0332961 10862782|10862782|10862782 10866246|10866246|10866246 X + 10865055 10865119 3'utr CG2186 FlyBase G60355.1 TCAAATAGATTAGATTACTTGGGGATTCGTCATTTATGTGTGATATACCATATATATGTATAGTT 36 10865091 0.989506363 6 29 394 0.80952381 1.531478917 0.047619048 0.138888889 0.261904762 36 8 0 34 X:10865055-10865119 7 CG2186 FBtr0332961|FBtr0332961|FBtr0332961 10862782|10862782|10862782 10866246|10866246|10866246 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X + 10865016 10865113 3'utr CG2186 FlyBase G45618.1 AAATCGGTTTGCGATCAGGCTCCAACGCTCCATTCTCAGTCAAATAGATTAGATTACTTGGGGATTCGTCATTTATGTGTGATATACCATATATATGT 22 10865090 0.989701717 7 21 206 0.96969697 1.505149978 0.03030303 0.272727273 0.515151515 22 1 0 32 X:10865016-10865113 7 26.5 4302 FBgn0030243 1064.863333 20.89333333 32.09 0.024885823 1.26834716 0.825802431 2 3 2.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 10865385 10865390 + X_10865385_10865390_+ 0.99994773 0.999947112 0.999947421 4.24E-07 CG2186 FBtr0332961 10862782 10866246 X + 10865295 10865412 3'utr CG2186 FlyBase G60356.1 ATCGCCAATACATTTTACCTGTGTATAGTGTATAGTTAAGAACCGACTAGCAGAAATGCAAACACTATTCGATGTTAGTTATCTATATATGTACCTAGAAAGTTACTCTCTATGTGTG 54 10865384 0.946230999 11 49 461 0.921875 1.293730757 0.15625 0.185185185 0.3125 54 3 2 59 X:10865295-10865412 6 CG2186 FBtr0332961 10862782 10866246 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X + 10865361 10865403 3'utr CG2186 FlyBase G45621.1 ATTCGATGTTAGTTATCTATATATGTACCTAGAAAGTTACTCT 25 10865384 0.790406837 4 25 229 1 1.579783597 0.210526316 0.44 0.631578947 25 0 0 38 X:10865361-10865403 6 28 4303 FBgn0030243 1064.863333 20.89333333 32.09 0.026294454 1.340140396 0.872545964 1 1 1 0.1 dme-miR-252-5p 6mer3-8 GTACTT X 10874076 10874081 - X_10874076_10874081_- 0.980189437 0.900342446 0.940265942 0.056460355 CG1637 FBtr0339836|FBtr0073406 10873898|10873898 10874473|10874473 X - 10874057 10874094 3'utr CG1637 FlyBase G66509.1 ATGTGTATGGGATGTACTTGATATACTTATTAGGATCA 18 10874082 0.839540507 4 17 167 0.958333333 1.361727836 0.291666667 0.222222222 0.416666667 18 1 0 23 X:10874057-10874094 6 CG1637 FBtr0339836|FBtr0073406 10873898|10873898 10874473|10874473 GTACTT 6mer3-8 dme-miR-252-5p X - 10874058 10874091 3'utr CG1637 FlyBase G50078.1 TGTATGGGATGTACTTGATATACTTATTAGGATC 8 10874082 0.815908866 4 8 79 1 1.041392685 0.181818182 0.375 0.545454545 8 0 0 11 X:10874058-10874091 6 13 4304 FBgn0030245 450.3333333 29.93666667 45.6 0.028867506 0.434250084 0.285087719 1 1 1 0.1 dme-miR-986-5p 6mer3-8 ATTCGA X 10874345 10874350 - X_10874345_10874350_- 0.91801302 1 0.95900651 0.057973564 CG1637 FBtr0339836|FBtr0073406 10873898|10873898 10874473|10874473 X - 10874307 10874461 3'utr CG1637 FlyBase G66510.1 AATCTGAACCATAACCTGAGCCGAATCAATTCAAGCTAAAGGAGTCTCTCGAGGCATTACACGCATCAATAGCAACAGGCAGTATTAGTAGCGCACATTCGCCTCGACCTGATTCGATCACAAACTATAGCAATAAGCGTGGCACATTCCTTATC 53 10874358 0.981498181 12 50 262 0.93442623 1.755874856 0.131147541 0.150943396 0.262295082 53 4 0 57 X:10874307-10874461 6 CG1637 FBtr0339836|FBtr0073406 10873898|10873898 10874473|10874473 ATTCGA 6mer3-8 dme-miR-986-5p X - 10874318 10874400 3'utr CG1637 FlyBase G50079.1 CGCATCAATAGCAACAGGCAGTATTAGTAGCGCACATTCGCCTCGACCTGATTCGATCACAAACTATAGCAATAAGCGTGGCA 22 10874349 0.959209384 7 22 107 1 1.447158031 0.142857143 0.227272727 0.392857143 22 0 0 28 X:10874318-10874400 6 16.5 4305 FBgn0030245 450.3333333 29.93666667 45.6 0.036639526 0.551163568 0.361842105 8 -1 3.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 11094392 11094399 + X_11094392_11094399_+ 0.631136625 0.631136626 0.631136626 0 CG2061 FBtr0073429|FBtr0332383|FBtr0073431 11094303|11094303|11094303 11094660|11094947|11094660 X + 11094366 11094448 3'utr CG2061 FlyBase G60372.1 TCGAATCAGGGAGAGTTATCATCATTTCTAGTCACTTGTTTGCCGATTTTTCTCTCATTGTTGCCTTTGCGTTCACCCAGCGA 209 11094391 0.794624299 12 200 2075 0.958174905 1.799340549 0.406844106 0.220095694 0.380228137 209 8 3 252 X:11094366-11094448 8 CG2061 FBtr0073431|FBtr0073429|FBtr0332383 11094303|11094303|11094303 11094660|11094660|11094947 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X + 11094366 11094414 3'utr CG2061 FlyBase G45629.1 TCGAATCAGGGAGAGTTATCATCATTTCTAGTCACTTGTTTGCCGATTT 126 11094391 0.961042815 6 123 1220 0.97740113 2.238046103 0.463276836 0.349206349 0.536723164 126 4 0 173 X:11094366-11094414 8 164 4306 FBgn0027498 98.96 5.68 8.753333333 1.657235247 28.87323944 18.73571973 1 1 1 0.1 dme-bantam-3p 6mer2-7 GATCTC X 11094526 11094531 + X_11094526_11094531_+ 0.998021999 0.999485842 0.998753921 0.001035063 CG2061 FBtr0073429|FBtr0332383|FBtr0073431 11094303|11094303|11094303 11094660|11094947|11094660 X + 11094500 11094614 3'utr CG2061 FlyBase G60373.2 CCCAGGTCCCGATGGAGCCCGTATCCGATCTCTGAGCGCACCGCTTGCTGGAATGTTCTCAGTCATTCTCATATCAAAATTCTCTGTGCTTTACGCTAAGCAATTAACTTAATAC 78 11094532 0.972476441 13 74 446 0.965909091 1.929418926 0.25 0.115384615 0.215909091 78 3 0 85 X:11094500-11094614 6 CG2061 FBtr0073431|FBtr0073429|FBtr0332383 11094303|11094303|11094303 11094660|11094660|11094947 GATCTC 6mer2-7 dme-bantam-3p X + 11094495 11094600 3'utr CG2061 FlyBase G45630.1 TAGATCCCAGGTCCCGATGGAGCCCGTATCCGATCTCTGAGCGCACCGCTTGCTGGAATGTTCTCAGTCATTCTCATATCAAAATTCTCTGTGCTTTACGCTAAGC 68 11094532 0.895780851 9 64 357 0.96 1.982271233 0.49 0.308823529 0.53 68 4 0 96 X:11094495-11094600 6 55.5 4307 FBgn0027498 98.96 5.68 8.753333333 0.56083266 9.771126761 6.340441736 -6 -6 -6 0.1 dme-miR-2a-2-5p 8mer-A1 TGATGAGA X 11111872 11111879 + X_11111872_11111879_+ 0.601196067 0.601113212 0.601154639 5.86E-05 Hsp60 FBtr0073434|FBtr0073435 11111824|11111824 11112308|11112308 X + 11111831 11111914 3'utr Hsp60 FlyBase G60388.1 TGCCACTGACTGGTCGACAGCCGGAGAGGGGGAGGGAGATGTGATGAGAACCGAAACCAGCATACTGTTTAAGTCACGATGTGG 64 11111875 0.887892394 7 60 171 0.941176471 1.329058719 0.25 0.0625 0.117647059 64 2 2 64 X:11111831-11111914 8 Hsp60 FBtr0073435|FBtr0073434 11111824|11111824 11112308|11112308 TGATGAGA 8mer-A1 dme-miR-2a-2-5p X + 11111831 11111915 3'utr Hsp60 FlyBase G45641.1 TGCCACTGACTGGTCGACAGCCGGAGAGGGGGAGGGAGATGTGATGAGAACCGAAACCAGCATACTGTTTAAGTCACGATGTGGA 50 11111874 0.889051715 7 49 142 0.985915493 1.84509804 0.281690141 0.26 0.478873239 50 1 0 70 X:11111831-11111915 8 45 4308 FBgn0015245 2987.88 154.9833333 236.8566667 0.015060846 0.290353801 0.189988319 -3 -2 -2.5 0.1 dme-miR-263a-5p 7mer-m1 TGCCATT X 11112690 11112696 - X_11112690_11112696_- 0.7562217 0.759209076 0.757715388 0.002112411 CG11122 FBtr0073481 11112393 11112850 X - 11112653 11112722 3'utr CG11122 FlyBase G66526.1 ATCGCCGCCATCGATCACATACGTACTGCCATTGTGTCATCGTTAATCGTTAACGCCGGCGCCAGGAGGG 29 11112691 0.980362346 6 28 198 0.974358974 1.278753601 0.076923077 0.172413793 0.384615385 29 0 1 38 X:11112653-11112722 7 CG11122 FBtr0073481 11112393 11112850 TGCCATT 7mer-m1 dme-miR-263a-5p X - 11112643 11112720 3'utr CG11122 FlyBase G50089.1 CGCCGCCATCGATCACATACGTACTGCCATTGTGTCATCGTTAATCGTTAACGCCGGCGCCAGGAGGGGATCAGGATC 14 11112691 0.97753838 4 14 95 1 1.477121255 0.2 0.714285714 0.866666667 14 0 0 30 X:11112643-11112720 7 20 4309 FBgn0030266 709.6566667 7.043333333 10.83 0.028182642 2.8395646 1.846722068 -5 -5 -5 0.1 dme-miR-277-3p 7mer-m8 TGCATTT X 11129983 11129989 - X_11129983_11129989_- 0.620204239 0.62020306 0.62020365 7.78E-07 Klp10A FBtr0346270|FBtr0073479|FBtr0073477|FBtr0073478 11129360|11129360|11129360|11129360 11130979|11130979|11130979|11130979 X - 11129964 11130006 3'utr Klp10A FlyBase G66557.1 ATGATTTAGAGATGATTTGCATTTCATTTTGTACTAATATTTA 8 11129990 0.990776445 3 7 78 1 1 0.1 0.25 0.4 8 0 0 10 X:11129964-11130006 7 Klp10A FBtr0073478|FBtr0073477|FBtr0346270|FBtr0073479 11129360|11129360|11129360|11129360 11130979|11130979|11130979|11130979 TGCATTT 7mer-m8 dme-miR-277-3p X - 11129955 11130011 3'utr Klp10A FlyBase G50110.1 TTATTATGATTTAGAGATGATTTGCATTTCATTTTGTACTAATATTTATTGCATATA 6 11129990 0.990042897 3 6 63 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 X:11129955-11130011 7 5.5 4310 FBgn0030268 2688.253333 72.09666667 110.64 0.002045938 0.076286467 0.049710774 1 1 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 11139630 11139635 + X_11139630_11139635_+ 1 0.999995953 0.999997976 2.83E-06 CG18292 FBtr0073437|FBtr0330387 11138901|11138943 11139689|11139689 X + 11139587 11139653 3'utr CG18292 FlyBase G60404.1 ACTATATGTATGAGAGCAAATACGACTAAGTTCAAGCATGTATACCAAACCGAAACCGAAATCGAAA 15 11139627 0.774037782 7 13 57 0.894736842 1.230448921 0.105263158 0.2 0.368421053 15 2 0 17 X:11139587-11139653 6 CG18292 FBtr0330387|FBtr0073437 11138943|11138901 11139689|11139689 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 11139605 11139647 3'utr CG18292 FlyBase G45653.1 AATACGACTAAGTTCAAGCATGTATACCAAACCGAAACCGAAA 8 11139627 0.928481755 2 8 30 1 1.079181246 0.333333333 0.375 0.583333333 8 0 0 12 X:11139605-11139647 6 8 4311 FBgn0030269 445.6566667 29.48666667 44.88 0.017951039 0.271309066 0.178253119 3 3 3 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG X 11145014 11145019 - X_11145014_11145019_- 0.995011035 0.999999997 0.997505516 0.003527756 Ran FBtr0073472|FBtr0340164 11144850|11144850 11145648|11145648 X - 11144996 11145051 3'utr Ran FlyBase G66578.1 AGCGCAATAGCTGGCCAATGAACTGAGTCCCCCCAAAGGAAAATTAATACTATTGA 59 11145040 0.929803119 5 54 198 0.907894737 1.537819095 0.052631579 0.220338983 0.394736842 59 6 1 69 X:11144996-11145051 6 Ran FBtr0340164|FBtr0073472 11144850|11144850 11145648|11145648 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" X - 11145011 11145055 3'utr Ran FlyBase G50130.1 CGAGAGCGCAATAGCTGGCCAATGAACTGAGTCCCCCCAAAGGAA 37 11145040 0.863119069 3 34 118 0.941176471 1.681241237 0.196078431 0.243243243 0.450980392 37 3 0 48 X:11145011-11145055 6 36.5 4312 FBgn0020255 11523.11667 1210.89 1867.136667 0.003167546 0.030143118 0.019548649 21 21 21 0.1 dme-miR-33-5p 6mer3-8 CAATGC X 11163063 11163068 + X_11163063_11163068_+ 0.972260357 0.869486301 0.920873329 0.072672263 Dlic FBtr0073441|FBtr0073444|FBtr0073443 11162784|11162784|11162784 11163196|11164670|11164670 X + 11163009 11163090 3'utr Dlic FlyBase G60423.1 CAGTTTCGCAAGGGGCTAGCTTCTAAGTTGTTAAGTTGTTCCACGGAACGTGATCAATGCCCAGAGATTGTTCTTCATAACC 16 11163065 0.964295909 7 16 85 1 1.342422681 0.272727273 0.1875 0.409090909 16 0 0 22 X:11163009-11163090 6 Dlic FBtr0073441|FBtr0073444|FBtr0073443 11162784|11162784|11162784 11163196|11164670|11164670 CAATGC 6mer3-8 dme-miR-33-5p X + 11163041 11163174 3'utr Dlic FlyBase G45669.1 AAGTTGTTCCACGGAACGTGATCAATGCCCAGAGATTGTTCTTCATAACCAATTCAAAACTTTTAAGGTACTCATTTGATGGGTTCCATAGCCACTAGTGATTCTTTTTACGAGCCTTCTGCTTTATACTCAAA 15 11163066 0.980086076 9 14 100 1 1.255272505 0 0.2 0.333333333 15 0 0 18 X:11163041-11163174 6 11 4313 FBgn0030276 2529.746667 84.58333333 130.21 0.004348261 0.130049261 0.084478919 -2 -3 -2.5 0.1 dme-miR-184-5p 6mer3-8 TGATAA X 11163453 11163458 + X_11163453_11163458_+ 0.99994972 0.999972105 0.999960913 1.58E-05 Dlic FBtr0073444|FBtr0073443 11162784|11162784 11164670|11164670 X + 11163348 11163479 3'utr Dlic FlyBase G60426.1 TGTTGTGCTCCTCCCAGCGCAGCTAGCTCCGCTCTGCATGTGTTTAAAGGGCCTTGGCGAGATGACAGAGAGAGAGAGAGAGAGAGATAGAGAGAGAGAGGATAATGATAATGATAATGGTAACGATAATGA 41 11163451 0.96468802 11 35 183 0.844444444 1.278753601 0.155555556 0.097560976 0.177777778 41 6 1 38 X:11163348-11163479 6 Dlic FBtr0073444|FBtr0073443 11162784|11162784 11164670|11164670 TGATAA 6mer3-8 dme-miR-184-5p X + 11163392 11163473 3'utr Dlic FlyBase G45671.1 TAAAGGGCCTTGGCGAGATGACAGAGAGAGAGAGAGAGAGAGATAGAGAGAGAGAGGATAATGATAATGATAATGGTAACGA 34 11163451 0.947847317 6 29 122 0.875 1.213074825 0.178571429 0.5 0.696428571 34 5 2 49 X:11163392-11163473 6 28.5 4314 FBgn0030276 2529.746667 84.58333333 130.21 0.01126595 0.336945813 0.218877198 2 2 2 0.1 dme-miR-1008-3p 6mer3-8 AGCTGT X 11163566 11163571 + X_11163566_11163571_+ 0.719356554 0.734937623 0.727147088 0.011017431 Dlic FBtr0073444|FBtr0073443 11162784|11162784 11164670|11164670 X + 11163554 11163658 3'utr Dlic FlyBase G60427.1 AATTATTTAATGAGCTGTAAAATGTAATTAACAAATGGCAGACAAACGAGAGATTCGAACACGATTCAAGATCCCTGCGATGATGAGTATGGCTTGCTACTAGCC 13 11163564 0.967206905 9 12 64 1 1.230448921 0.470588235 0.230769231 0.411764706 13 0 0 17 X:11163554-11163658 6 Dlic FBtr0073444|FBtr0073443 11162784|11162784 11164670|11164670 AGCTGT 6mer3-8 dme-miR-1008-3p X + 11163540 11163577 3'utr Dlic FlyBase G45672.1 ACATTTGTATAATAAATTATTTAATGAGCTGTAAAATG 6 11163564 0.977534853 2 6 45 1 1.041392685 0.636363636 0.666666667 0.818181818 6 0 0 11 X:11163540-11163577 6 6 4315 FBgn0030276 2529.746667 84.58333333 130.21 0.002371779 0.070935961 0.04607941 2 2 2 0.1 dme-miR-283-5p 8mer-m1 TGATATTT X 11333669 11333676 + X_11333669_11333676_+ 0.555593202 0.555587917 0.555590559 3.75E-06 CG1657 FBtr0073448 11333527 11334071 X + 11333648 11333684 3'utr CG1657 FlyBase G60461.1 ATGTATATGTATGTCTGTGTCTGATATTTGTGTAAAA 7 11333668 0.614516572 5 7 65 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 X:11333648-11333684 8 CG1657 FBtr0073448 11333527 11334071 TGATATTT 8mer-m1 dme-miR-283-5p X + 11333603 11333677 3'utr CG1657 FlyBase G45699.1 TCCCATCCCACTCTCTCCTCCAGTCGATATTTTCCATATTTATATATGTATATGTATGTCTGTGTCTGATATTTG 10 11333663 0.991519419 6 10 108 1 1.278753601 0.157894737 0.7 0.842105263 10 0 0 19 X:11333603-11333677 8 7 4316 FBgn0030286 666.2266667 13.88 21.43333333 0.010506935 0.504322767 0.32659409 1 6 3.5 0.1 dme-miR-8-3p 7mer-A1 AGTATTA X 11334360 11334366 - X_11334360_11334366_- 0.82333104 0.823349562 0.823340301 1.32E-05 Kap3 FBtr0343145|FBtr0289956|FBtr0289954|FBtr0289955|FBtr0343146 11334185|11334185|11334185|11334185|11334185 11334788|11334788|11334788|11334788|11334788 X - 11334337 11334428 3'utr Kap3 FlyBase G66610.1 ATGGCTTAGCTTCCACTTTGGTTGTTCGCAACGCAATTACTGTGCAATAATCTCTCACTTAAAGTATTACGTCGAACGTTTTTAGTTGTACT 11 11334370 0.990975075 9 10 91 0.909090909 1 0.272727273 0 0 11 1 0 10 X:11334337-11334428 7 Kap3 FBtr0289956|FBtr0289954|FBtr0289955|FBtr0343146|FBtr0343145 11334185|11334185|11334185|11334185|11334185 11334788|11334788|11334788|11334788|11334788 AGTATTA 7mer-A1 dme-miR-8-3p X - 11334350 11334428 3'utr Kap3 FlyBase G50154.1 ATGGCTTAGCTTCCACTTTGGTTGTTCGCAACGCAATTACTGTGCAATAATCTCTCACTTAAAGTATTACGTCGAACGT 10 11334369 0.980381356 6 9 83 0.909090909 1 0.090909091 0.1 0.181818182 10 1 0 10 X:11334350-11334428 7 7 4317 FBgn0028421 198.6666667 6.38 9.766666667 0.035234899 1.097178683 0.716723549 4 3 3.5 0.1 dme-miR-1007-3p 7mer-m8 TGAGCTT X 11344132 11344138 + X_11344132_11344138_+ 0.618811563 0.609015374 0.613913469 0.006926959 CG34348 FBtr0112557 11344094 11344734 X + 11344108 11344204 3'utr CG34348 FlyBase G60467.2 TAGCGCATAGAGAGATTAACAGATTGAGCTTGGTCCTGGCCATACAAAACAGACTTTGTTCCATGTACTTGATGACAGTACTTCATGGCAGCGCCAT 80 11344124 0.966840782 16 56 537 0.714285714 0.967815317 0.120879121 0.125 0.230769231 80 20 6 65 X:11344108-11344204 7 CG34348 FBtr0112557 11344094 11344734 TGAGCTT 7mer-m8 dme-miR-1007-3p X + 11344088 11344222 stop_codon CG34348 FlyBase G45703.1 AGGAGTGATCCATGATCGTTTAGCGCATAGAGAGATTAACAGATTGAGCTTGGTCCTGGCCATACAAAACAGACTTTGTTCCATGTACTTGATGACAGTACTTCATGGCAGCGCCATATATGCATATATCTCACT 59 11344124 0.986234546 14 42 388 0.727272727 1.158362492 0.070707071 0.423728814 0.656565657 59 23 4 72 X:11344088-11344222 7 50 4318 FBgn0085377 250.7633333 13.94666667 21.41 0.199391192 3.585086042 2.33535731 8 8 8 0.1 dme-miR-986-5p 6mer2-7 TTCGAG X 11344251 11344256 + X_11344251_11344256_+ 1 0.997916642 0.998958321 0.001473186 CG34348 FBtr0112557 11344094 11344734 X + 11344224 11344330 3'utr CG34348 FlyBase G60468.1 TGTAAATGCCTACCCAGAACTTTTGCCTTCGAGTTGATTGCGATCCGGACGAGCTGTGGCTCGAGTATGAGTGATTCGATTAGCCCTTTAGATATGACTAAGCACTT 26 11344246 0.767994193 10 25 194 0.931034483 1.431363764 0.310344828 0.115384615 0.206896552 26 2 0 27 X:11344224-11344330 6 CG34348 FBtr0112557 11344094 11344734 TTCGAG 6mer2-7 dme-miR-986-5p X + 11344227 11344303 3'utr CG34348 FlyBase G45703.2 AAATGCCTACCCAGAACTTTTGCCTTCGAGTTGATTGCGATCCGGACGAGCTGTGGCTCGAGTATGAGTGATTCGAT 21 11344246 0.862334063 8 19 135 1 1.531478917 0.294117647 0.428571429 0.647058824 21 0 0 34 X:11344227-11344303 6 12.5 4319 FBgn0085377 250.7633333 13.94666667 21.41 0.049847798 0.896271511 0.583839327 5 5 5 0.1 dme-miR-33-5p 7mer-A1 AATGCAA X 11344532 11344538 + X_11344532_11344538_+ 0.78272227 0.782718492 0.782720381 2.69E-06 CG34348 FBtr0112557 11344094 11344734 X + 11344470 11344542 3'utr CG34348 FlyBase G60469.1 AGGCACATTAAGCAATTATGTCGCTAGTTTTCCATTAGGTATATCATTTTTGTACCTTTTTTAATGCAACAGT 5 11344529 0.988405962 5 5 58 1 0.698970004 0.2 0 0 5 0 0 5 X:11344470-11344542 7 CG34348 FBtr0112557 11344094 11344734 AATGCAA 7mer-A1 dme-miR-33-5p X + 11344510 11344542 3'utr CG34348 FlyBase G45705.1 ATATCATTTTTGTACCTTTTTTAATGCAACAGT 4 11344529 0.985609229 4 4 34 1 0.698970004 0.2 0.25 0.4 4 0 0 5 X:11344510-11344542 7 3 4320 FBgn0085377 250.7633333 13.94666667 21.41 0.011963472 0.215105163 0.140121439 3 3 3 0.1 dme-miR-317-3p 6mer3-8 TGTGTT X 11345162 11345167 - X_11345162_11345167_- 0.999999996 0.907617999 0.953808998 0.065323939 CG1597 FBtr0307491|FBtr0290227 11344801|11344504 11345266|11345266 X - 11345142 11345180 3'utr CG1597 FlyBase G66623.1 ATGCGTTTTTGTGTGTGTTTGGAATAGCTGGGTGCTTCA 6 11345161 0.7869796 4 6 63 1 0.903089987 0.25 0.333333333 0.5 6 0 0 8 X:11345142-11345180 6 CG1597 FBtr0307491|FBtr0290227 11344801|11344504 11345266|11345266 TGTGTT 6mer3-8 dme-miR-317-3p X - 11345145 11345243 3'utr CG1597 FlyBase G50165.1 CTGCCAAAACTGCTGTGAGTTCCTCAACGAACGACCCTGTCCCCGCATTCCTGGCGAAGATCAATGCGTTTTTGTGTGTGTTTGGAATAGCTGGGTGCT 12 11345161 0.981176781 7 11 78 0.928571429 0.812913357 0 0.166666667 0.285714286 12 0 1 13 X:11345145-11345243 6 5 4321 FBgn0030289 291.8433333 10.33 15.84666667 0.01713248 0.484027106 0.315523769 -6 -6 -6 0.1 dme-miR-317-3p 6mer3-8 TGTGTT X 11358250 11358255 + X_11358250_11358255_+ 0.999995212 0.99999863 0.999996921 2.40E-06 dsh FBtr0073454 11358224 11358724 X + 11358158 11358271 stop_codon dsh FlyBase G60497.1 GAGGCGGTGGCGGTGGCGGCAACAATACCAACGATCAGGACGTATCCGTATTTAATTACGTATTGTAGAAACCTTTCTTTTTGCAATCAAATTGTGTTTTTAATTAATTAAATT 20 11358249 0.986814766 9 18 158 0.956521739 1.342422681 0.043478261 0.1 0.217391304 20 1 0 22 X:11358158-11358271 6 dsh FBtr0073454 11358224 11358724 TGTGTT 6mer3-8 dme-miR-317-3p X + 11358233 11358273 3'utr dsh FlyBase G45723.1 TCTTTTTGCAATCAAATTGTGTTTTTAATTAATTAAATTAA 5 11358249 0.975905947 2 5 73 1 0.903089987 0 0.6 0.75 5 0 0 8 X:11358233-11358273 6 7 4322 FBgn0000499 392 16.79 25.82333333 0.017857143 0.41691483 0.271072673 1 1 1 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC X 11359835 11359840 + X_11359835_11359840_+ 0.99687039 0.921808292 0.959339341 0.05307692 Pa1 FBtr0073456 11359762 11360929 X + 11359748 11359856 stop_codon Pa1 FlyBase G60500.1 TGCCGAGAGCTCATAGCACCCGCCGAAATTCTGATGCTGATCCGGTCCAGGCAATCGGCTGCAGATCGTACTCTATCGCCATGCGGACTAGTCTATAAGCATCAGTCGT 42 11359841 0.819898195 9 38 225 0.914893617 1.33243846 0.234042553 0.119047619 0.212765957 42 3 1 43 X:11359748-11359856 6 Pa1 FBtr0073456 11359762 11360929 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" X + 11359817 11359861 3'utr Pa1 FlyBase G45727.1 ACTCTATCGCCATGCGGACTAGTCTATAAGCATCAGTCGTTTTAC 22 11359842 0.750031125 3 20 134 0.972222222 1.243038049 0.138888889 0.409090909 0.638888889 22 0 1 35 X:11359817-11359861 6 25 4323 FBgn0030294 242.3333333 18.24 28.02 0.103163686 1.370614035 0.892219843 -6 -7 -6.5 0.1 dme-miR-2b-2-5p 6mer3-8 TTGAAG X 11359988 11359993 + X_11359988_11359993_+ 0.999959833 0.999984264 0.999972049 1.73E-05 Pa1 FBtr0073456 11359762 11360929 X + 11359977 11360009 3'utr Pa1 FlyBase G60502.1 ATTTAGAGAGTTTGAAGTTTGAACATCAAAACA 9 11359988 0.750827602 3 9 69 1 1 0 0.111111111 0.2 9 0 0 10 X:11359977-11360009 6 Pa1 FBtr0073456 11359762 11360929 TTGAAG 6mer3-8 dme-miR-2b-2-5p X + 11359976 11360009 3'utr Pa1 FlyBase G45729.1 CATTTAGAGAGTTTGAAGTTTGAACATCAAAACA 10 11359988 0.74403505 4 9 69 0.9375 0.875061263 0.125 0.5 0.6875 10 0 1 15 X:11359976-11360009 6 9 4324 FBgn0030294 242.3333333 18.24 28.02 0.037138927 0.493421053 0.321199143 0 0 0 0.1 dme-miR-277-3p 6mer3-8 TGCATT X 11360237 11360242 + X_11360237_11360242_+ 0.830902092 0.999999997 0.915451044 0.119570272 Pa1 FBtr0073456 11359762 11360929 X + 11360219 11360272 3'utr Pa1 FlyBase G60503.1 AAGGATGTTAACTCCCATTGCATTGGTCAGTTCTTCATTTTAGACTAAGAACTT 8 11360258 0.989126223 6 8 73 1 1 0.1 0.25 0.4 8 0 0 10 X:11360219-11360272 6 Pa1 FBtr0073456 11359762 11360929 TGCATT 6mer3-8 dme-miR-277-3p X + 11360219 11360267 3'utr Pa1 FlyBase G45730.1 AAGGATGTTAACTCCCATTGCATTGGTCAGTTCTTCATTTTAGACTAAG 5 11360258 0.988129941 5 5 47 1 0.698970004 0.2 0 0 5 0 0 5 X:11360219-11360267 6 5 4325 FBgn0030294 242.3333333 18.24 28.02 0.020632737 0.274122807 0.178443969 -21 -21 -21 0.1 dme-miR-14-3p 6mer3-8 AAGACT X 11360437 11360442 + X_11360437_11360442_+ 0.952974913 0.911869046 0.932421979 0.029066261 Pa1 FBtr0073456 11359762 11360929 X + 11360397 11360634 3'utr Pa1 FlyBase G60505.1 TGACAATATTCTTGATAGTATTGTCCGAAACCGACGTTTGAAGACTAGAATATAGAATATAGGATAGAACGGATGTAAATTTAAATCCAATGCGAGTAAAGCAGATAACAAGATAGGCAACTGTAGATCAGTCAACTTCTGTACATAAAAGAACTGAATTTCACTAATAGCTGTTAAAACTAGAATATAGAATGTAGGATAGAACGGATGTACATTTAAATCCAAGATGAGTAAGATA 110 11360442 0.975511654 24 105 612 0.96031746 2.08278537 0.142857143 0.127272727 0.238095238 110 5 0 121 X:11360397-11360634 6 Pa1 FBtr0073456 11359762 11360929 AAGACT 6mer3-8 dme-miR-14-3p X + 11360409 11360467 3'utr Pa1 FlyBase G45732.1 TGATAGTATTGTCCGAAACCGACGTTTGAAGACTAGAATATAGAATATAGGATAGAACG 45 11360433 0.747640826 5 42 253 0.971014493 1.826074803 0.086956522 0.4 0.608695652 45 2 0 67 X:11360409-11360467 6 50.5 4326 FBgn0030294 242.3333333 18.24 28.02 0.208390646 2.768640351 1.802284083 -5 4 -0.5 0.1 dme-miR-1007-3p 6mer3-8 TGAGCT X 11360735 11360740 + X_11360735_11360740_+ 0.999989322 0.837111062 0.918550192 0.11517228 Pa1 FBtr0073456 11359762 11360929 X + 11360661 11360789 3'utr Pa1 FlyBase G60506.1 AGTCAACTTCCGTACATACAACTAATACGAAATGAATCAGCACAGTTGCCCTACTAAACAATATCAACTTCTCATGAGCTAAAAATAGACTACTAAGAATTATGATAAGCCAAGGTTGTTCCGGAAAAC 19 11360735 0.976716669 9 16 97 0.85 1.230448921 0.15 0.052631579 0.1 19 3 0 17 X:11360661-11360789 6 Pa1 FBtr0073456 11359762 11360929 TGAGCT 6mer3-8 dme-miR-1007-3p X + 11360701 11360764 3'utr Pa1 FlyBase G45734.1 CACAGTTGCCCTACTAAACAATATCAACTTCTCATGAGCTAAAAATAGACTACTAAGAATTATG 16 11360746 0.964495768 6 15 83 0.95 1.278753601 0.1 0.25 0.4 16 1 0 19 X:11360701-11360764 6 14 4327 FBgn0030294 242.3333333 18.24 28.02 0.057771664 0.76754386 0.499643112 0 -11 -5.5 0.1 dme-miR-317-3p 6mer3-8 TGTGTT X 11361418 11361423 - X_11361418_11361423_- 0.950052646 0.953155971 0.951604309 0.002194435 hop FBtr0073457 11360928 11361814 X - 11361402 11361456 3'utr hop FlyBase G66628.1 ATGTATATGTATAAACAAATTCTCAACCTACTTTGTGTTATACATTTTAGACAAC 30 11361425 0.728777607 6 29 268 0.970588235 1.51851394 0 0.133333333 0.235294118 30 1 0 33 X:11361402-11361456 6 hop FBtr0073457 11360928 11361814 TGTGTT 6mer3-8 dme-miR-317-3p X - 11361365 11361450 3'utr hop FlyBase G50168.1 ATGTATAAACAAATTCTCAACCTACTTTGTGTTATACATTTTAGACAACTTTGTTAAATATTGTTAAGCTTGAGCTTCAATTTTTT 22 11361425 0.983430569 5 22 173 1 1.556302501 0.055555556 0.454545455 0.666666667 22 0 0 36 X:11361365-11361450 6 15 4328 FBgn0004864 288.6033333 6.79 10.3 0.051974452 2.209131075 1.45631068 2 2 2 0.1 dme-miR-277-3p 6mer2-7 GCATTT X 11361589 11361594 - X_11361589_11361594_- 0.99981155 0.999830658 0.999821104 1.36E-05 hop FBtr0073457 11360928 11361814 X - 11361530 11361606 3'utr hop FlyBase G66629.1 ACGCCATCGCAAGCATTTTTGGATTCTCGCCAGATCTTAGTTTTATTTGATTGTGCTTACCACTGGCCACGCCCCCC 10 11361585 0.978012723 7 9 71 0.846153846 1.041392685 0.230769231 0.3 0.461538462 10 2 0 11 X:11361530-11361606 6 hop FBtr0073457 11360928 11361814 GCATTT 6mer2-7 dme-miR-277-3p X - 11361540 11361618 3'utr hop FlyBase G50169.1 CCGGATACACTTACGCCATCGCAAGCATTTTTGGATTCTCGCCAGATCTTAGTTTTATTTGATTGTGCTTACCACTGGC 10 11361588 0.984422444 8 9 74 1 1.230448921 0.058823529 0.5 0.705882353 10 0 0 17 X:11361540-11361618 6 5 4329 FBgn0004864 288.6033333 6.79 10.3 0.017324817 0.736377025 0.485436893 -9 -6 -7.5 0.1 dme-miR-184-3p 6mer3-8 TCCGTC X 11368939 11368944 + X_11368939_11368944_+ 0.892902761 0.972225963 0.932564362 0.056089973 Tim8 FBtr0343640|FBtr0073482 11368879|11368879 11369283|11369183 X + 11368894 11368967 3'utr Tim8 FlyBase G60510.1 ATCGACACCGACACCGGGATCTGGGTATCCGAGTCCGTGGACGCTTCCGTCACTGTCCTACTGTTAAATCTATT 130 11368938 0.97920259 9 127 869 0.98 2.167317335 0.12 0.130769231 0.246666667 130 3 0 147 X:11368894-11368967 6 Tim8 FBtr0343640|FBtr0073482 11368879|11368879 11369283|11369183 TCCGTC 6mer3-8 dme-miR-184-3p X + 11368919 11368961 3'utr Tim8 FlyBase G45735.1 TATCCGAGTCCGTGGACGCTTCCGTCACTGTCCTACTGTTAAA 65 11368938 0.810731683 5 65 406 1 1.973127854 0.095744681 0.323076923 0.531914894 65 0 0 94 X:11368919-11368961 6 95 4330 FBgn0027359 213.3333333 41.63666667 63.68333333 0.4453125 2.281642783 1.491756085 1 1 1 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG X 11388263 11388268 + X_11388263_11388268_+ 0.999997322 0.999759969 0.999878645 0.000167796 dlg1 FBtr0073483|FBtr0073491|FBtr0073492|FBtr0302114|FBtr0333263 11388173|11388173|11388173|11388173|11388173 11389291|11389291|11389291|11389291|11389291 X + 11388243 11388283 3'utr dlg1 FlyBase G60511.1 AAGGAGGTGGAAAACAGCTGGCTGTGTAATTAGCCCCCCCC 11 11388261 0.962726822 3 11 52 1 1.041392685 0 0 0 11 0 0 11 X:11388243-11388283 6 dlg1 FBtr0333263|FBtr0302114|FBtr0073492|FBtr0073491|FBtr0073483 11388173|11388173|11388173|11388173|11388173 11389291|11389291|11389291|11389291|11389291 GCTGTG 6mer2-7 dme-miR-1008-3p X + 11388220 11388273 3'utr dlg1 FlyBase G45736.1 AGCAATCAGCTCGCGGAAAAGCCAAGGAGGTGGAAAACAGCTGGCTGTGTAATT 7 11388261 0.964536224 2 6 27 0.833333333 1 0.333333333 0.571428571 0.75 7 2 0 10 X:11388220-11388273 6 8 4331 FBgn0001624 7812.856667 177.1533333 273.5833333 0.001023953 0.04515862 0.029241547 2 2 2 0.1 dme-miR-317-3p 7mer-A1 GTGTTCA X 11406703 11406709 + X_11406703_11406709_+ 0.823349402 0.755695295 0.789522349 0.047838673 dlg1 FBtr0330390|FBtr0301289|FBtr0073485|FBtr0112813|FBtr0073486|FBtr0073488|FBtr0308088|FBtr0073489|FBtr0073487|FBtr0308089|FBtr0333261|FBtr0112812|FBtr0073490|FBtr0333262 11406300|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177 11407751|11407751|11407751|11409776|11407751|11407751|11407985|11407751|11407751|11408338|11408338|11409776|11407751|11409776 X + 11406681 11406762 3'utr dlg1 FlyBase G60525.1 TGGCATATGAGATGAGATATGGGTGTTCAAACGGTAGCGGACAAAGGTGTATAGTTTTTAGTTAGAACAAAGTTGGATATAA 8 11406700 0.981467526 6 8 57 1 0.954242509 0.111111111 0.125 0.222222222 8 0 0 9 X:11406681-11406762 7 dlg1 FBtr0073487|FBtr0333261|FBtr0112812|FBtr0073490|FBtr0308089|FBtr0333262|FBtr0073489|FBtr0073485|FBtr0301289|FBtr0073486|FBtr0112813|FBtr0073488|FBtr0330390|FBtr0308088 11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406300|11406177 11407751|11408338|11409776|11407751|11408338|11409776|11407751|11407751|11407751|11407751|11409776|11407751|11407751|11407985 GTGTTCA 7mer-A1 dme-miR-317-3p X + 11406675 11406762 3'utr dlg1 FlyBase G45739.1 GGCATATGGCATATGAGATGAGATATGGGTGTTCAAACGGTAGCGGACAAAGGTGTATAGTTTTTAGTTAGAACAAAGTTGGATATAA 13 11406701 0.98017639 8 11 84 0.823529412 1.146128036 0.117647059 0.230769231 0.411764706 13 3 0 14 X:11406675-11406762 7 3.5 4332 FBgn0001624 7812.856667 177.1533333 273.5833333 0.00044798 0.019756896 0.012793177 3 2 2.5 0.1 dme-miR-13b-2-5p 7mer-m1 TTGACGC X 11407329 11407335 + X_11407329_11407335_+ 0.829687779 0.829686875 0.829687327 6.36E-07 dlg1 FBtr0330390|FBtr0301289|FBtr0073485|FBtr0112813|FBtr0073486|FBtr0073488|FBtr0308088|FBtr0073489|FBtr0073487|FBtr0308089|FBtr0333261|FBtr0112812|FBtr0073490|FBtr0333262 11406300|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177 11407751|11407751|11407751|11409776|11407751|11407751|11407985|11407751|11407751|11408338|11408338|11409776|11407751|11409776 X + 11407318 11407377 3'utr dlg1 FlyBase G60531.1 ATTGATGAATATTGACGCTAATAACGATGGAGATGATGAAAAACGTTGGTGCATTTGTTG 22 11407329 0.767864433 6 20 125 0.935483871 1.462397998 0.322580645 0.227272727 0.451612903 22 2 0 29 X:11407318-11407377 7 dlg1 FBtr0073487|FBtr0333261|FBtr0112812|FBtr0073490|FBtr0308089|FBtr0333262|FBtr0073489|FBtr0073485|FBtr0301289|FBtr0073486|FBtr0112813|FBtr0073488|FBtr0330390|FBtr0308088 11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406300|11406177 11407751|11408338|11409776|11407751|11408338|11409776|11407751|11407751|11407751|11407751|11409776|11407751|11407751|11407985 TTGACGC 7mer-m1 dme-miR-13b-2-5p X + 11407309 11407423 3'utr dlg1 FlyBase G45743.1 TAAATATATATTGATGAATATTGACGCTAATAACGATGGAGATGATGAAAAACGTTGGTGCATTTGTTGTTAGATGTATGTAATTTTTCCCACTCGCCTTTGCCTAAAAGCAACA 27 11407329 0.861610961 10 26 188 0.974358974 1.278753601 0.358974359 0.333333333 0.538461538 27 0 1 38 X:11407309-11407423 7 14.5 4333 FBgn0001624 7812.856667 177.1533333 273.5833333 0.001855915 0.081849998 0.053000305 0 0 0 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT X 11432091 11432097 - X_11432091_11432097_- 0.658999524 0.658999526 0.658999525 0 Evi5 FBtr0300733|FBtr0332620|FBtr0073547 11431331|11431331|11430521 11433279|11434760|11433279 X - 11432053 11432118 3'utr Evi5 FlyBase G66657.1 TGGTTCATTTAACCCATATTTGGCAGCTTGTCGCGTAAAACGATTTCGATTTTGACATCGACTTTC 310 11432098 0.7391194 10 302 2354 0.974093264 2.274157849 0.007772021 0.193548387 0.352331606 310 9 1 376 X:11432053-11432118 7 Evi5 FBtr0300733|FBtr0332620|FBtr0073547 11431331|11431331|11430521 11433279|11434760|11433279 GGCAGCT 7mer-m8 dme-miR-980-3p X - 11432058 11432127 3'utr Evi5 FlyBase G50187.1 TGATTTATATGGTTCATTTAACCCATATTTGGCAGCTTGTCGCGTAAAACGATTTCGATTTTGACATCGA 151 11432098 0.978917616 10 149 1096 0.99122807 2.354108439 0.00877193 0.370860927 0.583333333 151 2 0 226 X:11432058-11432127 7 226.5 4334 FBgn0262740 507.6533333 10.50666667 16.15 0.446170615 21.55774112 14.0247678 1 1 1 0.1 dme-miR-1003-3p 7mer-A1 TGTGAGA X 11432830 11432836 - X_11432830_11432836_- 0.823220021 0.823234661 0.823227341 1.04E-05 Evi5 FBtr0300733|FBtr0332620|FBtr0073547 11431331|11431331|11430521 11433279|11434760|11433279 X - 11432695 11432896 3'utr Evi5 FlyBase G66660.1 ATGTTTTGCAATCGAAACACACTCATATTTATTTATTTTAAATCCTAATTGAAACGATATTGTGAGAGTATTTTACACCCCTGTACATTAATCAATACGGCAACTAATCCGATTCGATGCGATGCGATGGATTGGAGTTAGGAGATTGGCATTTTGATATACCCTAGATGTATGGCACATATGCAATGCAATGAATTTTATG 80 11432837 0.900703208 25 75 580 0.943820225 1.225309282 0.101123596 0.1 0.191011236 80 1 4 84 X:11432695-11432896 7 Evi5 FBtr0300733|FBtr0332620|FBtr0073547 11431331|11431331|11430521 11433279|11434760|11433279 TGTGAGA 7mer-A1 dme-miR-1003-3p X - 11432781 11432850 3'utr Evi5 FlyBase G50188.2 AATTGAAACGATATTGTGAGAGTATTTTACACCCCTGTACATTAATCAATACGGCAACTAATCCGATTCG 31 11432837 0.767691074 5 28 190 0.954545455 1.62324929 0.295454545 0.35483871 0.545454545 31 2 0 42 X:11432781-11432850 7 31 4335 FBgn0262740 507.6533333 10.50666667 16.15 0.061065294 2.950507614 1.919504644 1 1 1 0.1 dme-miR-308-3p 8mer-m1 CTGTGATT X 11433094 11433101 - X_11433094_11433101_- 0.36403308 0.385559289 0.374796184 0.015221322 Evi5 FBtr0300733|FBtr0332620|FBtr0073547 11431331|11431331|11430521 11433279|11434760|11433279 X - 11433018 11433117 3'utr Evi5 FlyBase G66661.1 CATATATATGAGGGGCCTGTGATTATGAAACGGAAAGGGAAGGTGGAGCATCGAGTGGAGGGAGAAGTAGAAGGAAGAGGGCAGAATAGTTGCAATCCCA 29 11433093 0.969947899 8 24 131 0.903225806 1.447158031 0.193548387 0.034482759 0.096774194 29 3 0 28 X:11433018-11433117 8 Evi5 FBtr0300733|FBtr0332620|FBtr0073547 11431331|11431331|11430521 11433279|11434760|11433279 CTGTGATT 8mer-m1 dme-miR-308-3p X - 11433068 11433119 3'utr Evi5 FlyBase G50189.2 TACATATATATGAGGGGCCTGTGATTATGAAACGGAAAGGGAAGGTGGAGCA 16 11433093 0.793407399 7 12 72 0.833333333 1 0.125 0.375 0.583333333 16 3 1 20 X:11433068-11433119 8 14 4336 FBgn0262740 507.6533333 10.50666667 16.15 0.027577875 1.33248731 0.866873065 -8 -8 -8 0.1 dme-bantam-3p 6mer3-8 TGATCT X 11433320 11433325 - X_11433320_11433325_- 0.999888657 0.999937987 0.999913322 3.49E-05 Evi5 FBtr0332620 11431331 11434760 X - 11433253 11433352 stop_codon Evi5 FlyBase G66662.1 GATCGAATCGACCGAGATCGACTTCAATGATCTGAATATGGTGAGGCGCGGAAGTACGGAGCTCTCCACATAACCTACAGATGGATCAGATCTAGCATAT 64 11433325 0.976300365 5 64 412 1 1.880813592 0.328947368 0.15625 0.289473684 64 0 0 76 X:11433253-11433352 6 Evi5 FBtr0332620 11431331 11434760 TGATCT 6mer3-8 dme-bantam-3p X - 11433299 11433346 3'utr Evi5 FlyBase G50190.1 ATCGACCGAGATCGACTTCAATGATCTGAATATGGTGAGGCGCGGAAG 35 11433325 0.875833396 3 33 232 0.934782609 1.633468456 0.52173913 0.228571429 0.413043478 35 3 0 43 X:11433299-11433346 6 48 4337 FBgn0262740 507.6533333 10.50666667 16.15 0.094552713 4.568527919 2.972136223 0 0 0 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA X 11458577 11458582 + X_11458577_11458582_+ 0.631193488 0.556228248 0.593710868 0.053008472 HP5 FBtr0073499 11458311 11459227 X + 11458564 11458586 3'utr HP5 FlyBase G60557.1 GAGAAAGCTATTGGTGCAAACGT 6 11458575 0.600288547 3 6 22 1 0.903089987 0 0.166666667 0.375 6 0 0 8 X:11458564-11458586 6 HP5 FBtr0073499 11458311 11459227 GTGCAA 6mer3-8 dme-miR-92b-3p X + 11458537 11458584 3'utr HP5 FlyBase G45762.1 GTTGAAAATACCAAAGTATTTTTGCAAGAGAAAGCTATTGGTGCAAAC 6 11458575 0.960394324 3 5 24 0.9 0.653212514 0.5 0.333333333 0.6 6 0 1 9 X:11458537-11458584 6 4.5 4338 FBgn0030301 1355.486667 49.67666667 76.80666667 0.003319841 0.090585788 0.058588664 2 2 2 0.1 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT X 11553276 11553282 + X_11553276_11553282_+ 0.563334201 0.557703423 0.560518812 0.003981577 Drak FBtr0301021|FBtr0340295|FBtr0301020 11552953|11552953|11552953 11555045|11555045|11555045 X + 11553218 11553302 3'utr Drak FlyBase G60586.1 AATAGGAAACGGGAACGGGAACTTAAACTTGAACTGGAATTGGAAGTGGAGCTGGAATTGGTGCTGCAGCGGGAGATGGAAGTGG 26 11553275 0.970333928 8 23 132 0.882352941 1.477121255 0.852941176 0.269230769 0.441176471 26 4 0 30 X:11553218-11553302 7 Drak FBtr0301021|FBtr0340295|FBtr0301020 11552953|11552953|11552953 11555045|11555045|11555045 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" X + 11553245 11553297 3'utr Drak FlyBase G45781.1 CTTGAACTGGAATTGGAAGTGGAGCTGGAATTGGTGCTGCAGCGGGAGATGGA 9 11553275 0.967972778 2 7 43 0.8 0.903089987 0.4 0.111111111 0.2 9 2 0 8 X:11553245-11553297 7 13 4339 FBgn0052666 1917.906667 50.05 76.71666667 0.006778223 0.25974026 0.169454703 1 1 1 0.1 dme-miR-92b-3p 6mer2-7 TGCAAT X 11555560 11555565 - X_11555560_11555565_- 0.950281696 0.990289848 0.970285772 0.028289999 CG1572 FBtr0073544|FBtr0073543|FBtr0339694|FBtr0339693 11555283|11555283|11555283|11555048 11555615|11555615|11555615|11555615 X - 11555546 11555584 3'utr CG1572 FlyBase G66671.1 CGGCCATTCAAGTGGAATTTGCAATCTCGAAGCATTTGT 16 11555565 0.882661665 4 16 89 1 1.255272505 0.277777778 0.125 0.222222222 16 0 0 18 X:11555546-11555584 6 CG1572 FBtr0339694|FBtr0339693|FBtr0073544|FBtr0073543 11555283|11555048|11555283|11555283 11555615|11555615|11555615|11555615 TGCAAT 6mer2-7 dme-miR-92b-3p X - 11555534 11555575 3'utr CG1572 FlyBase G50199.1 AAGTGGAATTTGCAATCTCGAAGCATTTGTTCTTCCCACAAC 14 11555565 0.968793623 4 13 71 0.958333333 1.361727836 0.166666667 0.428571429 0.666666667 14 1 0 23 X:11555534-11555575 6 14.5 4340 FBgn0030309 992.9133333 125.4333333 190.21 0.01460349 0.115599256 0.076231534 0 0 0 0.1 dme-miR-14-3p 6mer3-8 AAGACT X 11563120 11563125 - X_11563120_11563125_- 0.999953158 0.999998664 0.999975911 3.22E-05 RpII215 FBtr0073542 11562798 11563511 X - 11563091 11563164 3'utr RpII215 FlyBase G66678.1 CTTTGCACAACCCACTGTATGAAATTGTTTACTAACTGGAAGACTCTTGTCACTCTTCTGCAAAGTACTTTCAC 22 11563110 0.985400882 12 20 156 0.935483871 1.462397998 0.064516129 0.363636364 0.548387097 22 2 0 29 X:11563091-11563164 6 RpII215 FBtr0073542 11562798 11563511 AAGACT 6mer3-8 dme-miR-14-3p X - 11563091 11563151 3'utr RpII215 FlyBase G50202.1 ACTGTATGAAATTGTTTACTAACTGGAAGACTCTTGTCACTCTTCTGCAAAGTACTTTCAC 9 11563139 0.984892293 7 9 71 1 1.079181246 0.166666667 0.333333333 0.5 9 0 0 12 X:11563091-11563151 6 10 4341 FBgn0003277 4688.79 83.91 128.7166667 0.002132746 0.119175307 0.077690017 -15 14 -0.5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG X 11605490 11605495 + X_11605490_11605495_+ 0.999994027 0.999999151 0.999996589 3.68E-06 rho-4 FBtr0073518|FBtr0073519 11605445|11605445 11606288|11606000 X + 11605469 11605506 3'utr rho-4 FlyBase G60633.1 AGCCCTAACCCTTAACCATGTCCAAAGTGCACTTCGAT 11 11605487 0.673163228 4 9 59 0.916666667 0.740362689 0.166666667 0.090909091 0.166666667 11 0 1 11 X:11605469-11605506 6 rho-4 FBtr0073519|FBtr0073518 11605445|11605445 11606000|11606288 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" X + 11605438 11605524 stop_codon rho-4 FlyBase G45810.1 TACAACTAGCCCCATCACTAGCTCTAGCCCTAGCCCTAACCCTTAACCATGTCCAAAGTGCACTTCGATATTGAGCCGAGGTTGCAG 15 11605487 0.960185433 9 14 66 0.96 1.380211242 0.2 0.6 0.76 15 1 0 24 X:11605438-11605524 6 9 4342 FBgn0030318 1970.58 111.7533333 171.94 0.004567183 0.080534511 0.052343841 3 3 3 0.1 dme-miR-305-3p 7mer-m8 ATGTGCC X 11605560 11605566 + X_11605560_11605566_+ 0.674515654 0.674496049 0.674505852 1.39E-05 rho-4 FBtr0073518|FBtr0073519 11605445|11605445 11606288|11606000 X + 11605526 11605582 3'utr rho-4 FlyBase G60634.1 ACGCACAGTACTATATATAGGATTTCTTCTGACCATGTGCCTATGCCAGCTGCAAAA 6 11605561 0.977025278 4 6 40 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 X:11605526-11605582 7 rho-4 FBtr0073519|FBtr0073518 11605445|11605445 11606000|11606288 ATGTGCC 7mer-m8 dme-miR-305-3p X + 11605535 11605573 3'utr rho-4 FlyBase G45811.1 ACTATATATAGGATTTCTTCTGACCATGTGCCTATGCCA 8 11605552 0.64287683 3 8 74 1 1.041392685 0.636363636 0.125 0.363636364 8 0 0 11 X:11605535-11605573 7 6.5 4343 FBgn0030318 1970.58 111.7533333 171.94 0.003298521 0.058163813 0.037803885 -1 8 3.5 0.1 dme-miR-14-3p 8mer-A1 AAGACTGA X 11606698 11606705 - X_11606698_11606705_- 0.64353118 0.643552874 0.643542027 1.53E-05 CG2247 FBtr0306133|FBtr0306135|FBtr0073536|FBtr0306134 11606492|11606492|11606288|11606492 11606782|11606782|11606782|11606782 X - 11606667 11606774 3'utr CG2247 FlyBase G66713.1 AACGCACTAGTTATTCCTAGGTGCCATAAGTTAGCTCATATATAAGCCCTCCCAGTAGCAGAGAATGCCAAGACTGAGTCTTCTCGAGAAGCATCACCTCCGAACACC 118 11606709 0.874134005 12 98 581 0.810218978 1.568201724 0.160583942 0.144067797 0.262773723 118 24 2 111 X:11606667-11606774 8 CG2247 FBtr0073536|FBtr0306134|FBtr0306133|FBtr0306135 11606288|11606492|11606492|11606492 11606782|11606782|11606782|11606782 AAGACTGA 8mer-A1 dme-miR-14-3p X - 11606680 11606735 3'utr CG2247 FlyBase G50238.1 ATATAAGCCCTCCCAGTAGCAGAGAATGCCAAGACTGAGTCTTCTCGAGAAGCATC 81 11606709 0.875378357 6 60 402 0.736 1.486666573 0.152 0.395061728 0.608 81 31 2 92 X:11606680-11606735 8 89.5 4344 FBgn0030320 921.3333333 30.09666667 46.31666667 0.097141823 2.973751246 1.932349766 4 4 4 0.1 dme-miR-308-3p 7mer-m1 TGTGATT X 11619662 11619668 + X_11619662_11619668_+ 0.518918799 0.5211862 0.520052499 0.001603294 Met FBtr0073521|FBtr0343585 11619086|11619086 11619948|11621280 X + 11619639 11619685 3'utr Met FlyBase G60658.1 ATTTGGCCATTACTGTTTCTGTGTGTGATTTCGGTATAAAATAGTAG 36 11619668 0.777012262 7 35 385 0.975609756 1.301029996 0.317073171 0.111111111 0.219512195 36 0 1 40 X:11619639-11619685 7 Met FBtr0073521|FBtr0343585 11619086|11619086 11619948|11621280 TGTGATT 7mer-m1 dme-miR-308-3p X + 11619647 11619709 3'utr Met FlyBase G45822.1 ATTACTGTTTCTGTGTGTGATTTCGGTATAAAATAGTAGTTTGATTACATGTTATATTGATGA 27 11619668 0.990764224 6 26 280 1 1.612783857 0.219512195 0.296296296 0.536585366 27 0 0 41 X:11619647-11619709 7 29 4345 FBgn0002723 512 15.22666667 23.33666667 0.056640625 1.904553415 1.242679617 -6 -6 -6 0.1 dme-miR-79-3p 7mer-A1 AGCTTTA X 11620312 11620318 + X_11620312_11620318_+ 0.806254718 0.803548196 0.804901457 0.001913785 Met FBtr0343585 11619086 11621280 X + 11620282 11620327 3'utr Met FlyBase G60662.1 TTTGTAATCTATAAAAACACTTCCAGGCGCAGCTTTATTTTTCAAC 14 11620316 0.974252173 3 14 91 1 1.204119983 0 0.142857143 0.25 14 0 0 16 X:11620282-11620327 7 Met FBtr0343585 11619086 11621280 AGCTTTA 7mer-A1 dme-miR-79-3p X + 11620290 11620327 3'utr Met FlyBase G45825.1 CTATAAAAACACTTCCAGGCGCAGCTTTATTTTTCAAC 17 11620316 0.731283777 2 16 113 0.964285714 1.431363764 0 0.411764706 0.642857143 17 1 0 27 X:11620290-11620327 7 15 4346 FBgn0002723 512 15.22666667 23.33666667 0.029296875 0.985113835 0.642765319 -4 -4 -4 0.1 dme-miR-980-3p 6mer3-8 GGCAGC X 11693663 11693668 + X_11693663_11693668_+ 0.999814208 0.999783394 0.999798801 2.18E-05 bif FBtr0334464|FBtr0073527|FBtr0334465 11689550|11692808|11691412 11694740|11694740|11694740 X + 11693641 11693804 3'utr bif FlyBase G60701.1 CAGCAGCAGTGGGAGCAGCAATGGCAGCCACAGTCCAGGCAGCAACGGGAGCAGTCCAGCCGGAGCTGCGGGCAGCCGGTTGATGTTCAACGGGAATGGCAGCATTATGGGCATCGGCGAGGGACTGATCAAGGAGGGCGACTTGGCGGCAACGGAAGCAGGAC 63 11693662 0.999821232 13 60 180 0.96 1.857332496 0.373333333 0.126984127 0.266666667 63 3 0 72 X:11693641-11693804 6 bif FBtr0334465|FBtr0334464|FBtr0073527 11691412|11689550|11692808 11694740|11694740|11694740 GGCAGC 6mer3-8 dme-miR-980-3p X + 11693642 11693856 3'utr bif FlyBase G45853.1 AGCAGCAGTGGGAGCAGCAATGGCAGCCACAGTCCAGGCAGCAACGGGAGCAGTCCAGCCGGAGCTGCGGGCAGCCGGTTGATGTTCAACGGGAATGGCAGCATTATGGGCATCGGCGAGGGACTGATCAAGGAGGGCGACTTGGCGGCAACGGAAGCAGGACCTGGAACTGCAGATGGAGCAGGTGCCTCCAAGAAGGGTTCAGCTGTGGACGA 39 11693662 0.952141623 16 37 108 0.950819672 1.763427994 0.393442623 0.333333333 0.573770492 39 3 0 58 X:11693642-11693856 6 13 4347 FBgn0014133 2033.663333 48.19333333 73.77666667 0.006392405 0.269746853 0.176207473 1 1 1 0.1 dme-miR-980-3p 6mer3-8 GGCAGC X 11693738 11693743 + X_11693738_11693743_+ 0.999999927 1 0.999999963 7.07E-08 bif FBtr0334464|FBtr0073527|FBtr0334465 11689550|11692808|11691412 11694740|11694740|11694740 X + 11693641 11693804 3'utr bif FlyBase G60701.1 CAGCAGCAGTGGGAGCAGCAATGGCAGCCACAGTCCAGGCAGCAACGGGAGCAGTCCAGCCGGAGCTGCGGGCAGCCGGTTGATGTTCAACGGGAATGGCAGCATTATGGGCATCGGCGAGGGACTGATCAAGGAGGGCGACTTGGCGGCAACGGAAGCAGGAC 63 11693737 0.999821232 13 60 180 0.96 1.857332496 0.373333333 0.126984127 0.266666667 63 3 0 72 X:11693641-11693804 6 bif FBtr0334465|FBtr0334464|FBtr0073527 11691412|11689550|11692808 11694740|11694740|11694740 GGCAGC 6mer3-8 dme-miR-980-3p X + 11693642 11693856 3'utr bif FlyBase G45853.1 AGCAGCAGTGGGAGCAGCAATGGCAGCCACAGTCCAGGCAGCAACGGGAGCAGTCCAGCCGGAGCTGCGGGCAGCCGGTTGATGTTCAACGGGAATGGCAGCATTATGGGCATCGGCGAGGGACTGATCAAGGAGGGCGACTTGGCGGCAACGGAAGCAGGACCTGGAACTGCAGATGGAGCAGGTGCCTCCAAGAAGGGTTCAGCTGTGGACGA 39 11693737 0.952141623 16 37 108 0.950819672 1.763427994 0.393442623 0.333333333 0.573770492 39 3 0 58 X:11693642-11693856 6 18 4348 FBgn0014133 2033.663333 48.19333333 73.77666667 0.008851023 0.373495643 0.243979578 1 1 1 0.1 dme-miR-283-5p 7mer-A1 GATATTA X 11694185 11694191 + X_11694185_11694191_+ 0.782911225 0.767853684 0.775382454 0.01064726 bif FBtr0334464|FBtr0073527|FBtr0334463|FBtr0334465|FBtr0073526 11689550|11692808|11693937|11691412|11693937 11694740|11694740|11694740|11694740|11694740 X + 11694160 11694201 3'utr bif FlyBase G60704.1 ATCCATAAAGATACGTATATAAATAGATATTATTTGTAAGTT 10 11694179 0.960828471 4 9 100 0.923076923 1.079181246 0.230769231 0.2 0.384615385 10 1 0 12 X:11694160-11694201 7 bif FBtr0073526|FBtr0334463|FBtr0334465|FBtr0334464|FBtr0073527 11693937|11693937|11691412|11689550|11692808 11694740|11694740|11694740|11694740|11694740 GATATTA 7mer-A1 dme-miR-283-5p X + 11694127 11694193 3'utr bif FlyBase G45856.1 CAACAAGGCAACGTAAACCAAGTATGGCAAGAAATCCATAAAGATACGTATATAAATAGATATTATT 11 11694179 0.948387318 7 10 45 0.909090909 0.698970004 0.090909091 0 0 11 0 1 10 X:11694127-11694193 7 6 4349 FBgn0014133 2033.663333 48.19333333 73.77666667 0.002950341 0.124498548 0.081326526 6 6 6 0.1 dme-miR-305-5p 6mer2-7 GTACAA X 11694230 11694235 + X_11694230_11694235_+ 0.864413541 0.854190326 0.859301933 0.007228894 bif FBtr0334464|FBtr0073527|FBtr0334463|FBtr0334465|FBtr0073526 11689550|11692808|11693937|11691412|11693937 11694740|11694740|11694740|11694740|11694740 X + 11694210 11694265 3'utr bif FlyBase G60705.1 TAGAGATCCGATGTGTATGTGTACAACAGCAAGCGTGTGTGTCTGTCTTCTTTATA 38 11694228 0.650923563 11 36 280 0.934782609 1.633468456 0.130434783 0.210526316 0.347826087 38 3 0 43 X:11694210-11694265 6 bif FBtr0073526|FBtr0334463|FBtr0334465|FBtr0334464|FBtr0073527 11693937|11693937|11691412|11689550|11692808 11694740|11694740|11694740|11694740|11694740 GTACAA 6mer2-7 dme-miR-305-5p X + 11694212 11694263 3'utr bif FlyBase G45857.1 GAGATCCGATGTGTATGTGTACAACAGCAAGCGTGTGTGTCTGTCTTCTTTA 15 11694252 0.693989373 7 13 107 0.92 1.06069784 0.12 0.4 0.64 15 1 1 23 X:11694212-11694263 6 10 4350 FBgn0014133 2033.663333 48.19333333 73.77666667 0.004917235 0.207497579 0.13554421 2 -22 -10 0.1 dme-miR-7-5p 6mer3-8 GTCTTC X 11694254 11694259 + X_11694254_11694259_+ 0.8569631 0.967882947 0.912423023 0.078432143 bif FBtr0334464|FBtr0073527|FBtr0334463|FBtr0334465|FBtr0073526 11689550|11692808|11693937|11691412|11693937 11694740|11694740|11694740|11694740|11694740 X + 11694210 11694265 3'utr bif FlyBase G60705.1 TAGAGATCCGATGTGTATGTGTACAACAGCAAGCGTGTGTGTCTGTCTTCTTTATA 38 11694228 0.650923563 11 36 280 0.934782609 1.633468456 0.130434783 0.210526316 0.347826087 38 3 0 43 X:11694210-11694265 6 bif FBtr0073526|FBtr0334463|FBtr0334465|FBtr0334464|FBtr0073527 11693937|11693937|11691412|11689550|11692808 11694740|11694740|11694740|11694740|11694740 GTCTTC 6mer3-8 dme-miR-7-5p X + 11694212 11694263 3'utr bif FlyBase G45857.1 GAGATCCGATGTGTATGTGTACAACAGCAAGCGTGTGTGTCTGTCTTCTTTA 15 11694252 0.693989373 7 13 107 0.92 1.06069784 0.12 0.4 0.64 15 1 1 23 X:11694212-11694263 6 8 4351 FBgn0014133 2033.663333 48.19333333 73.77666667 0.003933788 0.165998063 0.108435368 26 2 14 0.1 dme-miR-308-3p 7mer-m1 TGTGATT X 11704012 11704018 + X_11704012_11704018_+ 0.451851658 0.521218576 0.486535117 0.049049805 PhKgamma FBtr0301501|FBtr0301500|FBtr0090002|FBtr0343587|FBtr0343648 11703642|11703642|11703642|11703642|11703642 11704394|11704394|11704394|11704394|11704394 X + 11703983 11704039 3'utr PhKgamma FlyBase G60721.1 AACATTACCTCCCCTGCCTTCTTCGTCCTTGTGATTTTGTTTAATACTTTTTAATTC 99 11704018 0.686928454 10 94 1183 0.938596491 1.427323786 0.263157895 0.111111111 0.228070175 99 4 3 107 X:11703983-11704039 7 PhKgamma FBtr0343648|FBtr0343587|FBtr0090002|FBtr0301500|FBtr0301501 11703642|11703642|11703642|11703642|11703642 11704394|11704394|11704394|11704394|11704394 TGTGATT 7mer-m1 dme-miR-308-3p X + 11703984 11704030 3'utr PhKgamma FlyBase G45868.1 ACATTACCTCCCCTGCCTTCTTCGTCCTTGTGATTTTGTTTAATACT 85 11704018 0.660804767 12 84 982 0.991935484 1.788875116 0.282258065 0.294117647 0.516129032 85 0 1 123 X:11703984-11704030 7 82 4352 FBgn0011754 327.82 14.47333333 22.3 0.25013727 5.665591893 3.677130045 -6 -6 -6 0.1 dme-miR-184-5p 7mer-m8 TGATAAG X 11719788 11719794 + X_11719788_11719794_+ 0.658995598 0.658981588 0.658988593 9.90E-06 prtp FBtr0332954|FBtr0303335|FBtr0303334|FBtr0073551 11719487|11719487|11719487|11719487 11719894|11719894|11719894|11719894 X + 11719746 11719809 3'utr prtp FlyBase G60733.1 GTTTAGTGTTTACGTAAATGGGGCACGGGACTGTGTGCGCGATGATAAGCCATTTAGCGAACTT 10 11719764 0.922568538 6 10 43 1 1.041392685 0.636363636 0.1 0.181818182 10 0 0 11 X:11719746-11719809 7 prtp FBtr0332954|FBtr0303335|FBtr0303334|FBtr0073551 11719487|11719487|11719487|11719487 11719894|11719894|11719894|11719894 TGATAAG 7mer-m8 dme-miR-184-5p X + 11719749 11719804 3'utr prtp FlyBase G45874.1 TAGTGTTTACGTAAATGGGGCACGGGACTGTGTGCGCGATGATAAGCCATTTAGCG 10 11719780 0.930254692 5 10 39 1 1.230448921 0.352941176 0.5 0.705882353 10 0 0 17 X:11719749-11719804 7 3 4353 FBgn0030329 624.6666667 43.55666667 66.86666667 0.004802561 0.068875794 0.044865404 24 8 16 0.1 dme-miR-14-3p 7mer-A1 AGACTGA X 11723711 11723717 + X_11723711_11723717_+ 0.823341142 0.823341061 0.823341101 0 Tango10 FBtr0073553|FBtr0332955|FBtr0073552 11722787|11722787|11722787 11723854|11723854|11723854 X + 11723634 11723779 3'utr Tango10 FlyBase G60749.1 TTGGCGTTAATGTAGTTGTTAAATAAAATGTCTCTTCAAAAATCAGCTGTGGTCTATTATTATTATGCGTTTTCATTAGACTGAACTAAAGAGTGTAGAATTACTGTCATTTAACGATATAATTTAGTGATTTCGGTTTTAATTAA 522 11723709 0.914210113 25 504 4182 0.968944099 1.95008655 0.046583851 0.185823755 0.340062112 522 14 6 624 X:11723634-11723779 7 Tango10 FBtr0073552|FBtr0332955|FBtr0073553 11722787|11722787|11722787 11723854|11723854|11723854 AGACTGA 7mer-A1 dme-miR-14-3p X + 11723657 11723821 3'utr Tango10 FlyBase G45886.1 TAAAATGTCTCTTCAAAAATCAGCTGTGGTCTATTATTATTATGCGTTTTCATTAGACTGAACTAAAGAGTGTAGAATTACTGTCATTTAACGATATAATTTAGTGATTTCGGTTTTAATTAAATTATTGCCTAACGTTGACCAGTCATTTTGTAAAATAACGTC 395 11723709 0.892218729 20 384 2984 0.976950355 1.963000348 0.044326241 0.293670886 0.505319149 395 8 5 551 X:11723657-11723821 7 378 4354 FBgn0030330 148.3733333 5.923333333 9.083333333 2.547627606 63.81541925 41.6146789 2 2 2 0.1 dme-miR-308-3p 7mer-m1 TGTGATT X 11763492 11763498 - X_11763492_11763498_- 0.443131015 0.443131017 0.443131016 0 CG9360 FBtr0073613 11763472 11763643 X - 11763483 11763513 3'utr CG9360 FlyBase G66763.1 ATGTACCAAACGTTATGTGATTAAAATTCTT 25 11763501 0.694579367 4 22 174 0.884615385 1.361727836 0.115384615 0.04 0.076923077 25 3 0 23 X:11763483-11763513 7 CG9360 FBtr0073613 11763472 11763643 TGTGATT 7mer-m1 dme-miR-308-3p X - 11763483 11763516 3'utr CG9360 FlyBase G50276.1 TGCATGTACCAAACGTTATGTGATTAAAATTCTT 15 11763501 0.700413501 3 15 110 1 1.361727836 0.086956522 0.466666667 0.652173913 15 0 0 23 X:11763483-11763516 7 19.5 4355 FBgn0030332 279 33.07666667 49.99 0.069892473 0.589539454 0.390078016 3 3 3 0.1 dme-miR-980-3p 6mer3-8 GGCAGC X 11796942 11796947 + X_11796942_11796947_+ 0.999741036 0.999990818 0.999865927 0.000176635 CkIIbeta FBtr0073558|FBtr0307896|FBtr0333204 11795608|11795608|11796668 11797924|11797301|11797565 X + 11796910 11796973 5'utr CkIIbeta FlyBase G60768.1 AAGGATGTGGATCGAAGAAGAGGATGAAGATTGGCAGCAGGACACGAGCAACGAACCGAACGAA 50 11796941 0.786101956 3 49 97 0.949152542 1.748188027 0.186440678 0.16 0.288135593 50 3 0 56 X:11796910-11796973 6 CkIIbeta FBtr0333204|FBtr0073558|FBtr0307896 11796668|11795608|11795608 11797565|11797924|11797301 GGCAGC 6mer3-8 dme-miR-980-3p X + 11796918 11796969 5'utr CkIIbeta FlyBase G45906.1 GGATCGAAGAAGAGGATGAAGATTGGCAGCAGGACACGAGCAACGAACCGAA 36 11796941 0.785545432 3 35 64 0.982142857 1.740362689 0.196428571 0.388888889 0.607142857 36 1 0 55 X:11796918-11796969 6 43 4356 FBgn0000259 3146.093333 305.1066667 469.0433333 0.013667745 0.140934318 0.091675965 1 1 1 0.1 dme-miR-2a-2-5p 8mer-A1 TGATGAGA X 11801933 11801940 - X_11801933_11801940_- 0.540651067 0.596538719 0.568594893 0.039518501 Hsc70-3 FBtr0073609|FBtr0345166|FBtr0073608|FBtr0073610|FBtr0073611 11801694|11801694|11801694|11801694|11801694 11802612|11802612|11802612|11802612|11802612 X - 11801874 11801969 3'utr Hsc70-3 FlyBase G66766.1 ATATATCGGGGAATCGGACTGTATTGTATTGATGAGATATAGAAGAAAGAGAGAGAGAGAGGAGCCAGGGAGCTGCGGGTCGTGCGGAGGAGGAGA 45 11801930 0.961533878 10 43 216 0.962962963 1.238882089 0.240740741 0.133333333 0.277777778 45 0 2 52 X:11801874-11801969 8 Hsc70-3 FBtr0073610|FBtr0073608|FBtr0345166|FBtr0073609|FBtr0073611 11801694|11801694|11801694|11801694|11801694 11802612|11802612|11802612|11802612|11802612 TGATGAGA 8mer-A1 dme-miR-2a-2-5p X - 11801768 11801970 3'utr Hsc70-3 FlyBase G50278.1 AATATATCGGGGAATCGGACTGTATTGTATTGATGAGATATAGAAGAAAGAGAGAGAGAGAGGAGCCAGGGAGCTGCGGGTCGTGCGGAGGAGGAGAATAGGTCGATGAGGAATGGGAACGGCAGAAGAGCAAGAGATAAACCACGAAATCATACGGAAACCACTAGAGAGCAGCGGCACACAACATCGGCCAGGCTTCATAA 46 11801939 0.999950049 18 36 174 0.823529412 1.748188027 0.191176471 0.347826087 0.558823529 46 12 0 56 X:11801768-11801970 8 26 4357 FBgn0001218 13055.07 506.7333333 774.0533333 0.001991563 0.051309038 0.033589417 -10 -1 -5.5 0.1 dme-miR-986-5p 6mer3-8 ATTCGA X 11802384 11802389 - X_11802384_11802389_- 0.628371516 0.994792023 0.811581769 0.25909842 Hsc70-3 FBtr0073609|FBtr0345166|FBtr0073608|FBtr0073610|FBtr0073611 11801694|11801694|11801694|11801694|11801694 11802612|11802612|11802612|11802612|11802612 X - 11802379 11802445 3'utr Hsc70-3 FlyBase G66769.1 TCACAACAGCAAAAGATAATACTACTTTACAGCCCTCAGCAGCCATCCCCCCATCCATTCGACCTTT 67 11802400 0.894333443 7 58 267 0.881578947 1.224014811 0.052631579 0.104477612 0.210526316 67 6 3 67 X:11802379-11802445 6 Hsc70-3 FBtr0073610|FBtr0073608|FBtr0345166|FBtr0073609|FBtr0073611 11801694|11801694|11801694|11801694|11801694 11802612|11802612|11802612|11802612|11802612 ATTCGA 6mer3-8 dme-miR-986-5p X - 11802378 11802435 3'utr Hsc70-3 FlyBase G50281.2 AAAAGATAATACTACTTTACAGCCCTCAGCAGCCATCCCCCCATCCATTCGACCTTTA 39 11802400 0.906572937 5 34 149 0.88 1.342422681 0.06 0.230769231 0.4 39 5 1 44 X:11802378-11802435 6 33 4358 FBgn0001218 13055.07 506.7333333 774.0533333 0.002527754 0.06512301 0.042632721 11 11 11 0.1 dme-miR-14-3p 7mer-A1 AGACTGA X 11802532 11802538 - X_11802532_11802538_- 0.809545035 0.796679271 0.803112153 0.009097424 Hsc70-3 FBtr0073609|FBtr0345166|FBtr0073608|FBtr0073610|FBtr0073611 11801694|11801694|11801694|11801694|11801694 11802612|11802612|11802612|11802612|11802612 X - 11802480 11802597 3'utr Hsc70-3 FlyBase G66770.1 CTCACATAACTTACACACAGCCCAGCCTGCATCCATTCGAGATCATAGTGTTGGAATTCAGACTGAAAAAAAAAACAATTATAACTTAATTGCAAACGCAGTAGCCACAACAACAACA 1692 11802541 0.962294804 18 1612 8797 0.951461119 1.792165671 0.326399208 0.153664303 0.290737989 1692 68 30 1921 X:11802480-11802597 7 Hsc70-3 FBtr0073610|FBtr0073608|FBtr0345166|FBtr0073609|FBtr0073611 11801694|11801694|11801694|11801694|11801694 11802612|11802612|11802612|11802612|11802612 AGACTGA 7mer-A1 dme-miR-14-3p X - 11802483 11802602 3'utr Hsc70-3 FlyBase G50282.1 CCCCCCTCACATAACTTACACACAGCCCAGCCTGCATCCATTCGAGATCATAGTGTTGGAATTCAGACTGAAAAAAAAAACAATTATAACTTAATTGCAAACGCAGTAGCCACAACAACA 1303 11802541 0.815950152 19 1256 6595 0.961621622 1.818812184 0.318918919 0.324635457 0.524324324 1303 45 26 1779 X:11802483-11802602 7 1440 4359 FBgn0001218 13055.07 506.7333333 774.0533333 0.110301975 2.841731351 1.860336928 3 3 3 0.1 dme-miR-278-3p 6mer2-7 CCACCG X 11809834 11809839 - X_11809834_11809839_- 0.85801525 0.795454699 0.826734974 0.044236954 CG1578 FBtr0073607|FBtr0345160|FBtr0339749 11809353|11809353|11808504 11809930|11809930|11809930 X - 11809817 11809868 3'utr CG1578 FlyBase G66785.1 ATGGAGGAAAATGATGAAACAATTTGCTGCCACCGCACCAAGCAGAACACAG 195 11809846 0.942589906 4 192 775 0.977973568 2.346352974 0.387665198 0.133333333 0.255506608 195 5 0 222 X:11809817-11809868 6 CG1578 FBtr0339749|FBtr0073607|FBtr0345160 11808504|11809353|11809353 11809930|11809930|11809930 CCACCG 6mer2-7 dme-miR-278-3p X - 11809813 11809875 3'utr CG1578 FlyBase G50297.1 GGATGATATGGAGGAAAATGATGAAACAATTTGCTGCCACCGCACCAAGCAGAACACAGAATA 142 11809846 0.944283925 4 141 580 0.990338164 1.834632606 0.425120773 0.338028169 0.54589372 142 0 2 205 X:11809813-11809875 6 166 4360 FBgn0030336 660.9566667 18.89 28.92 0.251151109 8.78771837 5.739972337 7 7 7 0.1 dme-miR-308-3p 7mer-m1 TGTGATT X 11833432 11833438 + X_11833432_11833438_+ 0.521223854 0.521223853 0.521223854 0 rudhira FBtr0305606 11832923 11834386 X + 11833402 11833456 3'utr rudhira FlyBase G60795.1 AAAACAAAACACAAAACTCTGCAAAAAAATTGTGATTTATCGAAAAGAAAAACAA 157 11833431 0.97909335 6 154 1074 0.985294118 1.826074803 0.200980392 0.248407643 0.421568627 157 1 2 201 X:11833402-11833456 7 rudhira FBtr0305606 11832923 11834386 TGTGATT 7mer-m1 dme-miR-308-3p X + 11833406 11833453 3'utr rudhira FlyBase G45916.1 CAAAACACAAAACTCTGCAAAAAAATTGTGATTTATCGAAAAGAAAAA 102 11833432 0.779517959 4 97 694 0.958333333 1.537819095 0.222222222 0.323529412 0.520833333 102 3 3 138 X:11833406-11833453 7 128.5 4361 FBgn0266019 2080.863333 30.08666667 46.56 0.061753215 4.270994904 2.759879725 1 0 0.5 0.1 dme-miR-980-3p 7mer-A1 GCAGCTA X 11833902 11833908 + X_11833902_11833908_+ 0.823342112 0.82310781 0.823224961 0.000165675 rudhira FBtr0305606 11832923 11834386 X + 11833883 11833934 3'utr rudhira FlyBase G60798.1 CACACACACACACACACATGCAGCTAAAGCTGTTTGCAGAACACACAGTTGG 19 11833901 0.997671864 3 19 32 1 1.322219295 0.523809524 0.105263158 0.19047619 19 0 0 21 X:11833883-11833934 7 rudhira FBtr0305606 11832923 11834386 GCAGCTA 7mer-A1 dme-miR-980-3p X + 11833886 11833927 3'utr rudhira FlyBase G45918.1 ACACACACACACACATGCAGCTAAAGCTGTTTGCAGAACACA 15 11833901 0.998622171 4 15 38 1 1.361727836 0.260869565 0.466666667 0.652173913 15 0 0 23 X:11833886-11833927 7 13.5 4362 FBgn0266019 2080.863333 30.08666667 46.56 0.006487692 0.448703745 0.289948454 1 1 1 0.1 dme-miR-1002-5p 7mer-m8 CTACTTA X 11836035 11836041 + X_11836035_11836041_+ 0.363582823 0.421637503 0.392610163 0.041050872 rudhira FBtr0305605 11835262 11837460 X + 11836011 11836083 3'utr rudhira FlyBase G60808.1 TATGTAATAGCATAATAGCTCCATCTACTTACCCTAGACTAAAGAAGCCCAAATTTCGCTTATTTTTCCAACT 20 11836064 0.983612219 7 17 133 0.875 0.84509804 0.083333333 0.15 0.291666667 20 1 2 21 X:11836011-11836083 7 rudhira FBtr0305605 11835262 11837460 CTACTTA 7mer-m8 dme-miR-1002-5p X + 11836031 11836066 3'utr rudhira FlyBase G45925.1 CCATCTACTTACCCTAGACTAAAGAAGCCCAAATTT 6 11836035 0.869792899 4 5 28 0.909090909 0.698970004 0.272727273 0.5 0.727272727 6 0 1 10 X:11836031-11836066 7 8 4363 FBgn0266019 2080.863333 30.08666667 46.56 0.003844558 0.265898515 0.171821306 -29 0 -14.5 0.1 dme-bantam-3p 6mer3-8 TGATCT X 11836603 11836608 + X_11836603_11836608_+ 0.999827294 0.999879652 0.999853473 3.71E-05 rudhira FBtr0305605 11835262 11837460 X + 11836573 11836635 3'utr rudhira FlyBase G60811.1 TATATATATTTTTTTATAAACGTTGAACGATGATCTACACATTTATATATTATAGATGAGCAT 27 11836603 0.889810243 2 25 200 0.939393939 1.491361694 0 0.222222222 0.363636364 27 2 0 31 X:11836573-11836635 6 rudhira FBtr0305605 11835262 11837460 TGATCT 6mer3-8 dme-bantam-3p X + 11836590 11836640 3'utr rudhira FlyBase G45926.1 AAACGTTGAACGATGATCTACACATTTATATATTATAGATGAGCATACTAA 22 11836603 0.909966578 4 21 137 1 1.431363764 0.148148148 0.181818182 0.333333333 22 0 0 27 X:11836590-11836640 6 23 4364 FBgn0266019 2080.863333 30.08666667 46.56 0.011053105 0.764458232 0.493986254 0 0 0 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA X 11837104 11837110 + X_11837104_11837110_+ 0.808804565 0.808817646 0.808811105 9.19E-06 rudhira FBtr0305605|FBtr0305605 11835262|11835262 11837460|11837460 X + 11837072 11837130 3'utr rudhira FlyBase G60815.1 AGACATATAGATACGCAAATTGGCAGAACATTTACTTAAAACCCATACCTAAATATATG 26 11837102 0.795662072 6 25 150 0.965517241 1.146128036 0.068965517 0.115384615 0.206896552 26 0 1 28 X:11837072-11837130 7 rudhira FBtr0305605|FBtr0305605 11835262|11835262 11837460|11837460 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" X + 11837080 11837118 3'utr rudhira FlyBase G45929.1 AGATACGCAAATTGGCAGAACATTTACTTAAAACCCATA 10 11837102 0.910907485 3 10 49 1 1.146128036 0 0.2 0.428571429 10 0 0 14 X:11837080-11837118 7 15 4365 FBgn0266019 2080.863333 30.08666667 46.56 0.007208546 0.498559716 0.322164948 2 2 2 0.1 dme-miR-283-5p 6mer3-8 TGATAT X 11864981 11864986 - X_11864981_11864986_- 1 0.999999997 0.999999999 0 CG2025 FBtr0073601 11864649 11865104 X - 11864971 11865031 3'utr CG2025 FlyBase G66823.1 GCCAAAGGTAGACGATTAGTTACACAGGAAGCAACCTTTTTCTCATGATATCCTCCTGACC 12 11864993 0.990955716 7 10 81 0.857142857 1.079181246 0.214285714 0.166666667 0.285714286 12 2 0 12 X:11864971-11865031 6 CG2025 FBtr0073601 11864649 11865104 TGATAT 6mer3-8 dme-miR-283-5p X - 11864949 11864993 3'utr CG2025 FlyBase G50323.1 TTTCTCATGATATCCTCCTGACCAAGTCGGGAATTTGCTCTTATG 5 11864992 0.954531376 3 4 41 0.8 0.602059991 0 0 0 5 1 0 4 X:11864949-11864993 6 6 4366 FBgn0030344 443.1533333 13.33 20.59 0.013539332 0.450112528 0.291403594 7 6 6.5 0.1 dme-miR-283-5p 7mer-m1 GATATTT X 11870950 11870956 + X_11870950_11870956_+ 0.765571866 0.765390391 0.765481128 0.00012834 CG1847 FBtr0330413|FBtr0073567 11870497|11870431 11871168|11871168 X + 11870932 11870974 3'utr CG1847 FlyBase G60830.1 TTGTATATCCCTATATGCGATATTTACTCGTAGCTAGAATCTA 17 11870945 0.78826669 5 17 164 1 1.397940009 0.12 0.352941176 0.56 17 0 0 25 X:11870932-11870974 7 CG1847 FBtr0330413|FBtr0073567 11870497|11870431 11871168|11871168 GATATTT 7mer-m1 dme-miR-283-5p X + 11870890 11870965 3'utr CG1847 FlyBase G45938.2 CACATTTGTTGTCCATAGTCGTATATGTATGTTTGTATTGTATTGTATATCCCTATATGCGATATTTACTCGTAGC 21 11870945 0.813196203 5 16 202 0.827586207 1.380211242 0.103448276 0.333333333 0.517241379 21 5 0 24 X:11870890-11870965 7 15 4367 FBgn0030345 101 6.976666667 10.73666667 0.148514851 2.150023889 1.397081652 5 5 5 0.1 dme-miR-305-3p 7mer-m1 TGTGCCG X 11877805 11877811 - X_11877805_11877811_- 0.813179329 0.704159911 0.75866962 0.077088357 CG10353 FBtr0331591|FBtr0331594|FBtr0344702|FBtr0114451|FBtr0308070|FBtr0114452|FBtr0344703 11877735|11877735|11877735|11877735|11877735|11877735|11877735 11878742|11878742|11878742|11878742|11878742|11878742|11878742 X - 11877793 11877827 3'utr CG10353 FlyBase G66853.1 AAAACAAATTGTGTTGTGTGCCGGATAAAAAAAAA 10 11877810 0.717539577 5 10 62 1 1.041392685 0.181818182 0.1 0.181818182 10 0 0 11 X:11877793-11877827 7 CG10353 FBtr0344702|FBtr0331594|FBtr0331591|FBtr0344703|FBtr0114452|FBtr0308070|FBtr0114451 11877735|11877735|11877735|11877735|11877735|11877735|11877735 11878742|11878742|11878742|11878742|11878742|11878742|11878742 TGTGCCG 7mer-m1 dme-miR-305-3p X - 11877795 11877826 3'utr CG10353 FlyBase G50343.1 AAACAAATTGTGTTGTGTGCCGGATAAAAAAA 5 11877812 0.662485519 3 5 35 1 0.903089987 0 0.6 0.75 5 0 0 8 X:11877795-11877826 7 7.5 4368 FBgn0030349 1118.516667 30.53 46.76333333 0.006705309 0.245660007 0.160382066 -1 1 0 0.1 dme-miR-11-3p 8mer-m1 CTGTGATG X 11889011 11889018 + X_11889011_11889018_+ 0.462274222 0.462274223 0.462274222 0 CG1840 FBtr0073571|FBtr0331590 11888967|11888967 11889186|11889186 X + 11888997 11889035 3'utr CG1840 FlyBase G60837.2 AATCCAACTCACCTCTGTGATGCGGCAATTAAAATAGAT 20 11889010 0.797048552 4 15 96 0.814814815 1.041392685 0.259259259 0.2 0.407407407 20 4 1 22 X:11888997-11889035 8 CG1840 FBtr0073571|FBtr0331590 11888967|11888967 11889186|11889186 CTGTGATG 8mer-m1 dme-miR-11-3p X + 11888997 11889026 3'utr CG1840 FlyBase G45942.1 AATCCAACTCACCTCTGTGATGCGGCAATT 19 11889010 0.67823952 4 14 101 0.740740741 1.301029996 0.185185185 0.315789474 0.518518519 19 7 0 20 X:11888997-11889026 8 19 4369 FBgn0030351 18.33333333 3.326666667 5.123333333 1.036363636 5.711422846 3.708523097 1 1 1 0.1 dme-miR-14-3p 8mer-A1 AAGACTGA X 11900956 11900963 - X_11900956_11900963_- 0.629233783 0.643565463 0.636399623 0.010134042 Upf1 FBtr0073596|FBtr0342744 11899994|11900443 11901237|11901237 X - 11900941 11901022 3'utr Upf1 FlyBase G66866.1 GAGGCAGCGTGATAGATGGAGACGGATATGGCAAGATGTGGAGTTACAAAGTAATAAAGAAGACTGAGACGGGAGAGAGATG 7 11900970 0.849820436 6 7 21 1 0.84509804 0.428571429 0 0 7 0 0 7 X:11900941-11901022 8 Upf1 FBtr0073596|FBtr0342744 11899994|11900443 11901237|11901237 AAGACTGA 8mer-A1 dme-miR-14-3p X - 11900912 11900975 3'utr Upf1 FlyBase G50348.1 AAAGTAATAAAGAAGACTGAGACGGGAGAGAGATGTCGAAAGATCGAAATATCGAGAGCAAATC 10 11900969 0.917531891 7 8 24 0.823529412 1.146128036 0.470588235 0.7 0.823529412 10 3 0 14 X:11900912-11900975 8 6 4370 FBgn0030354 1109.723333 26.07 40.02333333 0.005406753 0.230149597 0.149912551 7 6 6.5 0.1 dme-miR-995-5p 6mer3-8 AATTCG X 11907494 11907499 - X_11907494_11907499_- 0.957590793 0.998455609 0.978023201 0.028895777 pot FBtr0073595|FBtr0305609 11907407|11907407 11908579|11908579 X - 11907438 11907525 3'utr pot FlyBase G66882.1 AGCCGTATAAACAAACTTACATATTTAATTCGCTTTTTGGCTGGGCAAGCCTTCCAAAATGTGTATAATCTAAAACAATTTGAATTAA 9 11907489 0.980640075 5 8 62 1 1.113943352 0 0.333333333 0.538461538 9 0 0 13 X:11907438-11907525 6 pot FBtr0305609|FBtr0073595 11907407|11907407 11908579|11908579 AATTCG 6mer3-8 dme-miR-995-5p X - 11907444 11907514 3'utr pot FlyBase G50358.1 CAAACTTACATATTTAATTCGCTTTTTGGCTGGGCAAGCCTTCCAAAATGTGTATAATCTAAAACAATTTG 9 11907489 0.987873275 8 9 75 1 1.176091259 0.066666667 0.666666667 0.8 9 0 0 15 X:11907444-11907514 6 6 4371 FBgn0250871 1 0.03 0.05 6 200 120 -10 -10 -10 0.1 dme-miR-184-3p 8mer-A1 TCCGTCCA X 11907593 11907600 - X_11907593_11907600_- 0.631069772 0.631027497 0.631048635 2.99E-05 pot FBtr0073595|FBtr0305609 11907407|11907407 11908579|11908579 X - 11907574 11907650 3'utr pot FlyBase G66883.1 TACGATATACTTTCTCATGATAATCAATTTTCGCGTAACATTAGTACTAATCCGTCCAAGACATATACTATAAGTTT 79 11907602 0.78841305 10 71 591 0.905263158 1.33243846 0.210526316 0.151898734 0.294736842 79 6 3 86 X:11907574-11907650 8 pot FBtr0305609|FBtr0073595 11907407|11907407 11908579|11908579 TCCGTCCA 8mer-A1 dme-miR-184-3p X - 11907574 11907649 3'utr pot FlyBase G50359.1 ACGATATACTTTCTCATGATAATCAATTTTCGCGTAACATTAGTACTAATCCGTCCAAGACATATACTATAAGTTT 62 11907604 0.75493953 7 57 431 0.91011236 1.607455023 0.269662921 0.322580645 0.528089888 62 7 1 81 X:11907574-11907649 8 46 4372 FBgn0250871 1 0.03 0.05 46 1533.333333 920 2 4 3 0.1 dme-miR-184-5p 6mer3-8 TGATAA X 11907628 11907633 - X_11907628_11907633_- 0.862033665 0.459034515 0.66053409 0.284963467 pot FBtr0073595|FBtr0305609 11907407|11907407 11908579|11908579 X - 11907574 11907650 3'utr pot FlyBase G66883.1 TACGATATACTTTCTCATGATAATCAATTTTCGCGTAACATTAGTACTAATCCGTCCAAGACATATACTATAAGTTT 79 11907633 0.78841305 10 71 591 0.905263158 1.33243846 0.210526316 0.151898734 0.294736842 79 6 3 86 X:11907574-11907650 6 pot FBtr0305609|FBtr0073595 11907407|11907407 11908579|11908579 TGATAA 6mer3-8 dme-miR-184-5p X - 11907574 11907649 3'utr pot FlyBase G50359.1 ACGATATACTTTCTCATGATAATCAATTTTCGCGTAACATTAGTACTAATCCGTCCAAGACATATACTATAAGTTT 62 11907604 0.75493953 7 57 431 0.91011236 1.607455023 0.269662921 0.322580645 0.528089888 62 7 1 81 X:11907574-11907649 6 24 4373 FBgn0250871 1 0.03 0.05 24 800 480 0 -29 -14.5 0.1 dme-miR-308-3p 7mer-m1 TGTGATT X 12023151 12023157 - X_12023151_12023157_- 0.521223853 0.513577452 0.517400653 0.005406821 Usp7 FBtr0073641 12022835 12024307 X - 12023099 12023208 3'utr Usp7 FlyBase G66898.1 AGGCGTATGTATGGGAGATGAAAAATATAAGATTTGTTTCAAACAATTATTTGTGATTTTTAAACATGAAATGATAAAAATGTATGCAAAGGACTAGACAACATAAAATT 107 12023159 0.87340866 16 105 935 0.9765625 1.619788758 0.171875 0.168224299 0.3046875 107 1 2 125 X:12023099-12023208 7 Usp7 FBtr0073641 12022835 12024307 TGTGATT 7mer-m1 dme-miR-308-3p X - 12023087 12023202 3'utr Usp7 FlyBase G50369.1 ATGTATGGGAGATGAAAAATATAAGATTTGTTTCAAACAATTATTTGTGATTTTTAAACATGAAATGATAAAAATGTATGCAAAGGACTAGACAACATAAAATTAATTAATAAATT 59 12023159 0.918033586 14 59 461 1 1.949390007 0.06741573 0.389830508 0.595505618 59 0 0 89 X:12023087-12023202 7 46 4374 FBgn0030366 4316.233333 92.58333333 142.4366667 0.010657441 0.496849685 0.322950551 2 2 2 0.1 dme-miR-1008-3p 6mer3-8 AGCTGT X 12023375 12023380 - X_12023375_12023380_- 0.989310346 0.984258958 0.986784652 0.003571808 Usp7 FBtr0073641 12022835 12024307 X - 12023367 12023410 3'utr Usp7 FlyBase G66900.1 ATATAGATTATAGGTAAACGAGAGAGGAAGAGCTGTAAACAAAT 29 12023375 0.905149628 6 28 86 0.970588235 1.217483944 0.088235294 0.172413793 0.294117647 29 0 1 33 X:12023367-12023410 6 Usp7 FBtr0073641 12022835 12024307 AGCTGT 6mer3-8 dme-miR-1008-3p X - 12023367 12023423 3'utr Usp7 FlyBase G50371.1 AGAGGAGCATTATATATAGATTATAGGTAAACGAGAGAGGAAGAGCTGTAAACAAAT 12 12023375 0.871598928 5 12 40 1 1.204119983 0.25 0.333333333 0.5 12 0 0 16 X:12023367-12023423 6 17 4375 FBgn0030366 4316.233333 92.58333333 142.4366667 0.003938619 0.183618362 0.119351291 -5 -5 -5 0.1 dme-miR-304-5p 6mer2-7 GAGATT X 1217114 1217119 - X_1217114_1217119_- 0.909285592 0.962262648 0.93577412 0.037460396 CG3638 FBtr0070249|FBtr0330206|FBtr0330207|FBtr0346960|FBtr0336978 1215712|1217081|1217081|1217081|1215287 1221459|1219704|1221459|1221459|1221459 X - 1217101 1217157 3'utr CG3638 FlyBase G63956.1 ACGGATCAGTTGTGGAAGAAATAATTGTAGTGCCATTAGAGATTGGAAAATTGAATA 8 1217122 0.972666833 6 8 51 1 0.954242509 0.222222222 0.125 0.222222222 8 0 0 9 X:1217101-1217157 6 CG3638 FBtr0346960|FBtr0336978|FBtr0330207|FBtr0330206|FBtr0070249 1217081|1215287|1217081|1217081|1215712 1221459|1221459|1221459|1219704|1221459 GAGATT 6mer2-7 dme-miR-304-5p X - 1217109 1217136 3'utr CG3638 FlyBase G48212.1 TAATTGTAGTGCCATTAGAGATTGGAAA 5 1217121 0.796256637 3 5 34 1 0.903089987 0 0.6 0.75 5 0 0 8 X:1217109-1217136 6 5 4376 FBgn0261444 352.62 5.606666667 8.55 0.01417957 0.891795482 0.584795322 3 2 2.5 0.1 dme-miR-278-3p 6mer3-8 CCCACC X 1220356 1220361 - X_1220356_1220361_- 0.999182687 0.999605806 0.999394246 0.000299177 CG3638 FBtr0070249|FBtr0308707|FBtr0330207|FBtr0346960|FBtr0336978 1215712|1217947|1217081|1217081|1215287 1221459|1221459|1221459|1221459|1221459 X - 1220330 1220399 3'utr CG3638 FlyBase G63959.1 ATCCCGCCTCCATTGTGAACCAACCGTTGCCCGAGATTCCCACCAATCAACAACAGTCAAAGATCTCCGC 6 1220363 0.945988905 3 6 24 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 X:1220330-1220399 6 CG3638 FBtr0346960|FBtr0336978|FBtr0330207|FBtr0070249|FBtr0308707 1217081|1215287|1217081|1215712|1217947 1221459|1221459|1221459|1221459|1221459 CCCACC 6mer3-8 dme-miR-278-3p X - 1220345 1220378 3'utr CG3638 FlyBase G48215.1 AACCGTTGCCCGAGATTCCCACCAATCAACAACA 5 1220363 0.796871475 2 4 16 0.857142857 0.77815125 0 0.2 0.428571429 5 1 0 6 X:1220345-1220378 6 3.5 4377 FBgn0261444 352.62 5.606666667 8.55 0.009925699 0.624256837 0.409356725 2 2 2 0.1 dme-miR-14-3p 6mer2-7 AGACTG X 12331843 12331848 + X_12331843_12331848_+ 0.999947484 0.999950882 0.999949183 2.40E-06 Ten-a FBtr0300203|FBtr0299860|FBtr0300201|FBtr0346129|FBtr0308222|FBtr0299858|FBtr0308221|FBtr0346335|FBtr0308223|FBtr0299859|FBtr0310078 12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182 12332165|12332165|12332165|12335214|12332165|12332165|12332165|12332165|12332165|12332165|12335214 X + 12331825 12331869 3'utr Ten-a FlyBase G60869.1 TGGTACTCGAGCTTTTTGAGACTGGCATAGTTTTAAACAAAACCA 140 12331841 0.790078963 9 134 1296 0.941558442 1.860338007 0.012987013 0.078571429 0.162337662 140 8 1 145 X:12331825-12331869 6 Ten-a FBtr0310078|FBtr0308223|FBtr0299859|FBtr0346335|FBtr0308221|FBtr0299858|FBtr0308222|FBtr0346129|FBtr0300201|FBtr0299860|FBtr0300203 12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182 12335214|12332165|12332165|12332165|12332165|12332165|12332165|12335214|12332165|12332165|12332165 AGACTG 6mer2-7 dme-miR-14-3p X + 12331825 12331867 3'utr Ten-a FlyBase G45964.1 TGGTACTCGAGCTTTTTGAGACTGGCATAGTTTTAAACAAAAC 72 12331841 0.789914029 6 68 692 0.943396226 2 0.018867925 0.375 0.575471698 72 6 0 100 X:12331825-12331867 6 106 4378 FBgn0267001 445.45 3.99 6.113333333 0.237961612 26.56641604 17.3391494 2 2 2 0.1 dme-miR-1007-3p 6mer3-8 TGAGCT X 12460293 12460298 - X_12460293_12460298_- 0.622336203 0.999566607 0.810951405 0.266742174 Rab40 FBtr0073668|FBtr0339841|FBtr0073669 12459794|12459794|12459794 12460365|12460365|12460365 X - 12460267 12460313 3'utr Rab40 FlyBase G66931.1 GACATTAACTTTAATTGAGCTCTACTTATGTACTCTAGGCTATAACA 26 12460298 0.783987042 5 25 232 0.972972973 1.556302501 0.216216216 0.384615385 0.567567568 26 1 0 36 X:12460267-12460313 6 Rab40 FBtr0073669|FBtr0339841|FBtr0073668 12459794|12459794|12459794 12460365|12460365|12460365 TGAGCT 6mer3-8 dme-miR-1007-3p X - 12460273 12460309 3'utr Rab40 FlyBase G50395.1 TTAACTTTAATTGAGCTCTACTTATGTACTCTAGGCT 13 12460299 0.97318688 4 12 112 0.952380952 1.301029996 0 0.384615385 0.619047619 13 1 0 20 X:12460273-12460309 6 18.5 4379 FBgn0030391 73.34 5.683333333 8.663333333 0.252249795 3.255131965 2.135436706 0 1 0.5 0.1 dme-miR-980-5p 7mer-m1 AAAAACT X 12572393 12572399 - X_12572393_12572399_- 0.699199498 0.61289627 0.656047884 0.061025578 CG11138 FBtr0331718|FBtr0273245|FBtr0073662 12569167|12571209|12569749 12572485|12572485|12572485 X - 12572381 12572484 3'utr CG11138 FlyBase G66940.2 GTCCATTTTACTGTAAGAAGCTGCGCAGGGCTTTGGAGCACTTTTGAGAGGCGACAACACACTCCCCGGATAATATCTGGCATCTAAAAACTCTCGACACTTCT 48 12572407 0.966881076 12 43 259 0.964912281 1.740362689 0.122807018 0.166666667 0.298245614 48 2 0 55 X:12572381-12572484 7 CG11138 FBtr0073662|FBtr0273245|FBtr0331718 12569749|12571209|12569167 12572485|12572485|12572485 AAAAACT 7mer-m1 dme-miR-980-5p X - 12572342 12572424 3'utr CG11138 FlyBase G50403.1 ACTCCCCGGATAATATCTGGCATCTAAAAACTCTCGACACTTCTCTGTTGGGGTCACATTTTAAGGAGCAACTGACATTTTTT 17 12572407 0.803389525 6 17 98 1 1.431363764 0 0.411764706 0.62962963 17 0 0 27 X:12572342-12572424 7 24 4380 FBgn0030400 3724.663333 119.82 186.34 0.006443535 0.200300451 0.128796823 8 8 8 0.1 dme-miR-305-3p 6mer3-8 ATGTGC X 12584658 12584663 - X_12584658_12584663_- 0.811001605 0.514644887 0.662823246 0.209555832 LIMK1 FBtr0073660|FBtr0073661 12584383|12584383 12585938|12585938 X - 12584621 12584798 3'utr LIMK1 FlyBase G66954.1 ATATAGGATCGAAACGCTTGCAATTAACTGCTTACATAAGACATTTGAGTCGGGCCCTTGTTATACGGACGTATGCCAGTAGAACAGTGGCCGCGCCGAACCGATCTAGCATTTAACTATCTATATACAACAAATATGTGCGATATTTTTTATATGCAGCTAATTTAATGTGTTGTAT 69 12584662 0.986754341 15 68 584 0.987951807 1.913813852 0.036144578 0.173913043 0.313253012 69 1 0 82 X:12584621-12584798 6 LIMK1 FBtr0073661|FBtr0073660 12584383|12584383 12585938|12585938 ATGTGC 6mer3-8 dme-miR-305-3p X - 12584633 12584676 3'utr LIMK1 FlyBase G50411.1 ATATACAACAAATATGTGCGATATTTTTTATATGCAGCTAATTT 27 12584662 0.974713499 4 26 219 0.972972973 1.556302501 0 0.333333333 0.513513514 27 1 0 36 X:12584633-12584676 6 38 4381 FBgn0041203 1320 31.21333333 47.99333333 0.028787879 1.217428449 0.791776636 -1 -1 -1 0.1 dme-miR-13b-2-5p 7mer-A1 TTGACGA X 12584992 12584998 - X_12584992_12584998_- 0.686997621 0.782907398 0.734952509 0.06781847 LIMK1 FBtr0073660|FBtr0073661|FBtr0301831|FBtr0073659 12584383|12584383|12584943|12584943 12585938|12585938|12585938|12585938 X - 12584963 12585001 3'utr LIMK1 FlyBase G66956.1 GTATTGACGAGAATAAGTCTAACTCCTATAACTAAATAT 10 12584988 0.903612917 4 9 60 0.909090909 0.698970004 0.090909091 0.1 0.181818182 10 0 1 10 X:12584963-12585001 7 LIMK1 FBtr0073659|FBtr0301831|FBtr0073661|FBtr0073660 12584943|12584943|12584383|12584383 12585938|12585938|12585938|12585938 TTGACGA 7mer-A1 dme-miR-13b-2-5p X - 12584967 12585021 3'utr LIMK1 FlyBase G50413.1 GCTAAGAAACAAACTTTTTTGTATTGACGAGAATAAGTCTAACTCCTATAACTAA 10 12584988 0.978491124 4 10 68 1 1.230448921 0.058823529 0.6 0.764705882 10 0 0 17 X:12584967-12585021 7 7.5 4382 FBgn0041203 1320 31.21333333 47.99333333 0.005681818 0.240281931 0.156271704 -10 -10 -10 0.1 dme-miR-184-3p 6mer2-7 CCGTCC X 12585050 12585055 - X_12585050_12585055_- 0.999810175 1 0.999905087 0.000134209 LIMK1 FBtr0073660|FBtr0073661|FBtr0301831|FBtr0073659 12584383|12584383|12584943|12584943 12585938|12585938|12585938|12585938 X - 12585025 12585155 3'utr LIMK1 FlyBase G66957.1 AAATGTATTTGTATATCTATTCCATAATTATATAGATAAACGTATTCCATGTTAGTGCTTAAATCTAATTTATTATTTATCGATTCTCGACCCATTCACCCCGTCCCCTCATTCCAAGAACAATAATTAAC 17 12585046 0.990507784 9 11 123 0.65 0.636822098 0.05 0.176470588 0.3 17 5 2 13 X:12585025-12585155 6 LIMK1 FBtr0073659|FBtr0301831|FBtr0073661|FBtr0073660 12584943|12584943|12584383|12584383 12585938|12585938|12585938|12585938 CCGTCC 6mer2-7 dme-miR-184-3p X - 12585034 12585080 3'utr LIMK1 FlyBase G50414.1 TTTATCGATTCTCGACCCATTCACCCCGTCCCCTCATTCCAAGAACA 8 12585061 0.678903619 5 8 40 1 1.079181246 0 0.375 0.583333333 8 0 0 12 X:12585034-12585080 6 8 4383 FBgn0041203 1320 31.21333333 47.99333333 0.006060606 0.256300726 0.166689818 -9 6 -1.5 0.1 dme-miR-980-5p 6mer3-8 GAAAAA X 12585192 12585197 - X_12585192_12585197_- 0.922805892 0.999999996 0.961402944 0.054584472 LIMK1 FBtr0073660|FBtr0073661|FBtr0301831|FBtr0073659 12584383|12584383|12584943|12584943 12585938|12585938|12585938|12585938 X - 12585177 12585269 3'utr LIMK1 FlyBase G66958.1 CTGAAGAATCCTCGAGAGAGGGAGATCCCACCCGCAAAAAAAAGACAAAAGGAACGAAAAGAACTTTAACTAGAAAAATTGTGGTTTAAATAT 11 12585204 0.9991751 6 11 31 1 1.113943352 0.384615385 0.181818182 0.307692308 11 0 0 13 X:12585177-12585269 6 LIMK1 FBtr0073659|FBtr0301831|FBtr0073661|FBtr0073660 12584943|12584943|12584383|12584383 12585938|12585938|12585938|12585938 GAAAAA 6mer3-8 dme-miR-980-5p X - 12585177 12585225 3'utr LIMK1 FlyBase G50415.1 ACAAAAGGAACGAAAAGAACTTTAACTAGAAAAATTGTGGTTTAAATAT 7 12585204 0.939845972 4 7 30 1 0.903089987 0 0.142857143 0.25 7 0 0 8 X:12585177-12585225 6 3 4384 FBgn0041203 1320 31.21333333 47.99333333 0.002272727 0.096112772 0.062508682 7 7 7 0.1 dme-miR-263a-5p 7mer-m8 GTGCCAT X 12585296 12585302 - X_12585296_12585302_- 0.648979696 0.643696892 0.646338294 0.003735504 LIMK1 FBtr0073660|FBtr0073661|FBtr0301831|FBtr0073659 12584383|12584383|12584943|12584943 12585938|12585938|12585938|12585938 X - 12585283 12585328 3'utr LIMK1 FlyBase G66959.1 CGGATAAAGAGAGAAGGAAGAAACTTGTGCCATGATGTTGATGCGA 27 12585303 0.953136275 2 27 123 1 1.462397998 0.517241379 0.037037037 0.103448276 27 0 0 29 X:12585283-12585328 7 LIMK1 FBtr0073659|FBtr0301831|FBtr0073661|FBtr0073660 12584943|12584943|12584383|12584383 12585938|12585938|12585938|12585938 GTGCCAT 7mer-m8 dme-miR-263a-5p X - 12585280 12585321 3'utr LIMK1 FlyBase G50416.1 AGAGAGAAGGAAGAAACTTGTGCCATGATGTTGATGCGAAAA 13 12585303 0.946782185 2 13 57 1 1.278753601 0.210526316 0.307692308 0.526315789 13 0 0 19 X:12585280-12585321 7 20 4385 FBgn0041203 1320 31.21333333 47.99333333 0.015151515 0.640751815 0.416724545 1 1 1 0.1 dme-miR-7-5p 6mer2-7 TCTTCC X 12609435 12609440 + X_12609435_12609440_+ 0.99866659 0.998904642 0.998785616 0.000168291 Sec16 FBtr0340106|FBtr0310304|FBtr0113445|FBtr0340104 12608756|12608756|12608756|12608756 12609910|12609910|12609910|12609910 X + 12609419 12609452 3'utr Sec16 FlyBase G60906.1 ATATCCACACACGACCTCTTCCCCGATTTCTGTT 18 12609437 0.664848992 2 17 75 0.894736842 1.230448921 0.157894737 0.055555556 0.105263158 18 2 0 17 X:12609419-12609452 6 Sec16 FBtr0340104|FBtr0113445|FBtr0310304|FBtr0340106 12608756|12608756|12608756|12608756 12609910|12609910|12609910|12609910 TCTTCC 6mer2-7 dme-miR-7-5p X + 12609423 12609450 3'utr Sec16 FlyBase G45984.1 CCACACACGACCTCTTCCCCGATTTCTG 5 12609437 0.89906212 2 5 18 1 1 0.5 0.6 0.8 5 0 0 10 X:12609423-12609450 6 11.5 4386 FBgn0052654 1220.54 20.34 31.29 0.009422059 0.565388397 0.367529562 -2 -2 -2 0.1 dme-miR-317-3p 6mer3-8 TGTGTT X 12609712 12609717 + X_12609712_12609717_+ 0.98633924 0.569664083 0.778001661 0.294633789 Sec16 FBtr0340106|FBtr0310304|FBtr0113445|FBtr0340104 12608756|12608756|12608756|12608756 12609910|12609910|12609910|12609910 X + 12609661 12609767 3'utr Sec16 FlyBase G60909.1 AGAAGCAAATGAATTGTTCTCCCTGGTTTCTCTTATCAATGTATTCTCCTCTGTGTTTCTTTTTTACAATTGGTGTGAAATATGCAAATGATTCCAATTATATATAT 21 12609687 0.901102045 13 21 204 1 1.380211242 0.041666667 0.095238095 0.208333333 21 0 0 24 X:12609661-12609767 6 Sec16 FBtr0340104|FBtr0113445|FBtr0310304|FBtr0340106 12608756|12608756|12608756|12608756 12609910|12609910|12609910|12609910 TGTGTT 6mer3-8 dme-miR-317-3p X + 12609660 12609721 3'utr Sec16 FlyBase G45985.1 AAGAAGCAAATGAATTGTTCTCCCTGGTTTCTCTTATCAATGTATTCTCCTCTGTGTTTCTT 9 12609704 0.964568856 6 6 99 0.769230769 0.698970004 0.153846154 0.444444444 0.615384615 9 2 1 10 X:12609660-12609721 6 5.5 4387 FBgn0052654 1220.54 20.34 31.29 0.004506202 0.270403147 0.175775008 25 8 16.5 0.1 dme-miR-1008-3p 7mer-A1 GCTGTGA X 12679536 12679542 + X_12679536_12679542_+ 0.626767072 0.608485112 0.617626092 0.012927326 Tis11 FBtr0073683|FBtr0345165|FBtr0333756 12679239|12679239|12679239 12679702|12679702|12682554 X + 12679484 12679593 5'utr Tis11 FlyBase G60958.1 AACACAGACACCCCTTAATTATGAACCGATCCTTGATATCAATTCTCTCATTGCTGTGACAGTCAAACGTAATCGTTATACAATAATCGTTATATGAGAAGGACCGAATT 389 12679534 0.918152102 20 381 3064 0.979638009 2.335457901 0.088235294 0.12596401 0.230769231 389 8 1 433 X:12679484-12679593 7 Tis11 FBtr0333756|FBtr0345165|FBtr0073683 12679239|12679239|12679239 12682554|12679702|12679702 GCTGTGA 7mer-A1 dme-miR-1008-3p X + 12679489 12679561 5'utr Tis11 FlyBase G46019.1 AGACACCCCTTAATTATGAACCGATCCTTGATATCAATTCTCTCATTGCTGTGACAGTCAAACGTAATCGTTA 239 12679534 0.755531465 11 224 1903 0.942558747 1.955447211 0.093994778 0.426778243 0.64229765 239 19 3 361 X:12679489-12679561 7 275.5 4388 FBgn0011837 4912.7 119.65 184.0333333 0.056079142 2.302549102 1.497011411 2 2 2 0.1 dme-miR-970-3p 8mer-A1 TCTTATGA X 12679763 12679770 + X_12679763_12679770_+ 0.630786707 0.630786802 0.630786754 7.07E-08 Tis11 FBtr0333756 12679239 12682554 X + 12679737 12679822 3'utr Tis11 FlyBase G60960.1 ATGAATGCTATAGCTAAACAAAACATTCTTATGAACTGGACAAGATACAAAGACGGAGATAACGAAAAGGACTATTTGGGAATCTT 927 12679762 0.862003026 11 920 5440 0.991493384 2.543654233 0.396975425 0.116504854 0.225897921 927 7 2 1049 X:12679737-12679822 8 Tis11 FBtr0333756 12679239 12682554 TCTTATGA 8mer-A1 dme-miR-970-3p X + 12679723 12679841 3'utr Tis11 FlyBase G46021.1 AAAACATAGCTAGCATGAATGCTATAGCTAAACAAAACATTCTTATGAACTGGACAAGATACAAAGACGGAGATAACGAAAAGGACTATTTGGGAATCTTCAGCGAATGTTGCTCAAAT 594 12679762 0.972471895 9 590 3508 0.995348837 2.330413773 0.404651163 0.326599327 0.534883721 594 1 3 856 X:12679723-12679841 8 751 4389 FBgn0011837 4912.7 119.65 184.0333333 0.152869094 6.276640201 4.080782467 1 1 1 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA X 12679888 12679895 + X_12679888_12679895_+ 0.596902182 0.624736788 0.610819485 0.019682034 Tis11 FBtr0333756 12679239 12682554 X + 12679836 12679962 3'utr Tis11 FlyBase G60961.1 TCAAATCAAATCAACAAACCCCACGGCCAACGACGAATGTGAAAATCGTTCCTGCATTTATAGAAACTACTGCAGTGCATCCATTAGTAAAACCCATGCACACGCACACCTGTCGCTTTTGTTCAAT 32 12679896 0.978553899 11 30 194 0.944444444 1.531478917 0.138888889 0.125 0.222222222 32 2 0 34 X:12679836-12679962 8 Tis11 FBtr0333756 12679239 12682554 TGCATTTA 8mer-A1 dme-miR-277-3p X + 12679865 12679917 3'utr Tis11 FlyBase G46022.1 ACGACGAATGTGAAAATCGTTCCTGCATTTATAGAAACTACTGCAGTGCATCC 14 12679888 0.837078106 7 12 98 0.857142857 1.255272505 0.238095238 0.357142857 0.571428571 14 3 0 18 X:12679865-12679917 8 16.5 4390 FBgn0011837 4912.7 119.65 184.0333333 0.003358642 0.137902215 0.089657671 -8 0 -4 0.1 dme-miR-12-5p 6mer3-8 AATACT X 12679960 12679965 + X_12679960_12679965_+ 0.829232097 0.952917499 0.891074798 0.087458785 Tis11 FBtr0333756 12679239 12682554 X + 12679836 12679962 3'utr Tis11 FlyBase G60961.1 TCAAATCAAATCAACAAACCCCACGGCCAACGACGAATGTGAAAATCGTTCCTGCATTTATAGAAACTACTGCAGTGCATCCATTAGTAAAACCCATGCACACGCACACCTGTCGCTTTTGTTCAAT 32 12679946 0.978553899 11 30 194 0.944444444 1.531478917 0.138888889 0.125 0.222222222 32 2 0 34 X:12679836-12679962 3 Tis11 FBtr0333756 12679239 12682554 AATACT 6mer3-8 dme-miR-12-5p X + 12679925 12680028 3'utr Tis11 FlyBase G46023.1 AAACCCATGCACACGCACACCTGTCGCTTTTGTTCAATACTTATACGGCACACACTTTGGATAGGTCTCATGTAAAAATTGATTACCGGCTGCTTGTATATATA 15 12679946 0.811568165 10 14 100 0.952380952 1.301029996 0.047619048 0.266666667 0.476190476 15 1 0 20 X:12679925-12680028 6 2 4391 FBgn0011837 4912.7 119.65 184.0333333 0.000407108 0.01671542 0.010867596 14 14 14 0.1 dme-miR-7-5p 8mer-A1 GTCTTCCA X 12680143 12680150 + X_12680143_12680150_+ 0.675380438 0.67537981 0.675380124 4.24E-07 Tis11 FBtr0333756 12679239 12682554 X + 12680054 12680168 3'utr Tis11 FlyBase G60963.1 ATATATATATATGCATATTTGGCCACCACCTGTGTATATATAACTTTTGATGTGGATAAATAGAGAGCGAGATAGAGAGTTGGTCCGATGTCTTCCAATCCAAGCCAAGCCAAGC 83 12680142 0.982557211 11 81 606 0.980392157 2 0.029411765 0.180722892 0.333333333 83 2 0 100 X:12680054-12680168 8 Tis11 FBtr0333756 12679239 12682554 GTCTTCCA 8mer-A1 dme-miR-7-5p X + 12680118 12680169 3'utr Tis11 FlyBase G46024.1 GAGCGAGATAGAGAGTTGGTCCGATGTCTTCCAATCCAAGCCAAGCCAAGCC 46 12680142 0.980509136 4 45 321 0.985507246 1.832508913 0.15942029 0.326086957 0.550724638 46 1 0 68 X:12680118-12680169 8 57.5 4392 FBgn0011837 4912.7 119.65 184.0333333 0.011704358 0.480568324 0.312443398 1 1 1 0.1 dme-bantam-3p 6mer3-8 TGATCT X 12680370 12680375 + X_12680370_12680375_+ 0.641148538 0.59823903 0.619693784 0.030341598 Tis11 FBtr0333756 12679239 12682554 X + 12680272 12680398 3'utr Tis11 FlyBase G60965.1 ATTATGTAATAGAAAACGTTATGTACATACGAGAGTTAATATTTTGATAAAGATAATAAATTATAATTACCAATTACTCTATGATTACGTTTAAATGATGATCTTGAATGATATGAATATTATTGAT 176 12680370 0.986549479 16 173 1474 0.986784141 2.350248018 0.427312775 0.210227273 0.387665198 176 3 0 224 X:12680272-12680398 6 Tis11 FBtr0333756 12679239 12682554 TGATCT 6mer3-8 dme-bantam-3p X + 12680339 12680419 3'utr Tis11 FlyBase G46027.1 TACCAATTACTCTATGATTACGTTTAAATGATGATCTTGAATGATATGAATATTATTGATGATATACCTCTGCAAATCGTG 112 12680370 0.80003014 14 108 930 0.967532468 2.173186268 0.519480519 0.276785714 0.474025974 112 5 0 149 X:12680339-12680419 6 120 4393 FBgn0011837 4912.7 119.65 184.0333333 0.024426486 1.002925198 0.652055787 0 0 0 0.1 dme-miR-92b-3p 7mer-m1 TGCAATT X 12680654 12680660 + X_12680654_12680660_+ 0.765586663 0.765564166 0.765575415 1.59E-05 Tis11 FBtr0333756 12679239 12682554 X + 12680625 12680694 3'utr Tis11 FlyBase G60967.1 TACATAAAACATACCAGATATATTTTATATGCAATTAATGTTAATAATTTATGAAAACAACACATGCGAC 10 12680636 0.987055853 7 9 76 0.933333333 1.146128036 0 0.5 0.666666667 10 1 0 14 X:12680625-12680694 7 Tis11 FBtr0333756 12679239 12682554 TGCAATT 7mer-m1 dme-miR-92b-3p X + 12680616 12680661 3'utr Tis11 FlyBase G46029.1 ACATCTATTTACATAAAACATACCAGATATATTTTATATGCAATTA 6 12680648 0.987143297 5 5 48 0.833333333 0.698970004 0 0 0 6 1 0 5 X:12680616-12680661 7 4 4394 FBgn0011837 4912.7 119.65 184.0333333 0.000814216 0.03343084 0.021735193 18 6 12 0.1 dme-miR-184-5p 6mer3-8 TGATAA X 12680947 12680952 + X_12680947_12680952_+ 0.835877856 0.826188657 0.831033256 0.006851299 Tis11 FBtr0333756 12679239 12682554 X + 12680920 12680971 3'utr Tis11 FlyBase G60969.2 ACCATATTATAATTATGCTTACGTCGATGATAATGAAGTAAATGCATATGTA 722 12680953 0.890241912 6 719 4844 0.998837209 2.933993164 0.122093023 0.157894737 0.293023256 722 1 0 859 X:12680920-12680971 6 Tis11 FBtr0333756 12679239 12682554 TGATAA 6mer3-8 dme-miR-184-5p X + 12680924 12680977 3'utr Tis11 FlyBase G46031.2 TATTATAATTATGCTTACGTCGATGATAATGAAGTAAATGCATATGTAATAAAA 674 12680953 0.887890992 7 670 4576 0.994152047 3.008600172 0.072124756 0.363501484 0.581871345 674 6 0 1020 X:12680924-12680977 6 694.5 4395 FBgn0011837 4912.7 119.65 184.0333333 0.14136829 5.804429586 3.773772867 -6 -6 -6 0.1 dme-miR-980-3p 6mer3-8 GGCAGC X 12681817 12681822 + X_12681817_12681822_+ 0.999903528 0.999933395 0.999918462 2.11E-05 Tis11 FBtr0333756 12679239 12682554 X + 12681726 12681857 3'utr Tis11 FlyBase G60974.2 ACTTTGATTTTTACTTCCCATCGCAAAAAAACCCATTGTTTTCGTACTCCAATACGTATTGCAATCGAAATTGAACCGATTGGAATGTTATGGCAGCGTGCAAAAGTTTACTGTAATACCTATATTTAACAT 146 12681816 0.964546533 21 143 911 0.982142857 1.916453949 0.119047619 0.136986301 0.25 146 2 1 165 X:12681726-12681857 6 Tis11 FBtr0333756 12679239 12682554 GGCAGC 6mer3-8 dme-miR-980-3p X + 12681780 12681871 3'utr Tis11 FlyBase G46036.1 CGTATTGCAATCGAAATTGAACCGATTGGAATGTTATGGCAGCGTGCAAAAGTTTACTGTAATACCTATATTTAACATACTTATATATAATA 85 12681816 0.980100671 11 79 549 0.940397351 1.851258349 0.17218543 0.529411765 0.735099338 85 8 1 142 X:12681780-12681871 6 96 4396 FBgn0011837 4912.7 119.65 184.0333333 0.019541189 0.802340159 0.52164463 1 1 1 0.1 dme-miR-1007-3p 7mer-m8 TGAGCTT X 12681920 12681926 + X_12681920_12681926_+ 0.52499714 0.593351871 0.559174506 0.048334143 Tis11 FBtr0333756 12679239 12682554 X + 12681898 12681958 3'utr Tis11 FlyBase G60975.1 TTTAAAAAGCCTAACTTAGACCTGAGCTTTGGTTATCATCATGATGATTATTCTTATATTT 29 12681914 0.948881574 8 25 238 0.888888889 1.204119983 0.055555556 0.206896552 0.361111111 29 3 1 32 X:12681898-12681958 7 Tis11 FBtr0333756 12679239 12682554 TGAGCTT 7mer-m8 dme-miR-1007-3p X + 12681897 12681939 3'utr Tis11 FlyBase G46037.1 TTTTAAAAAGCCTAACTTAGACCTGAGCTTTGGTTATCATCAT 15 12681914 0.914918541 5 14 93 1 1.361727836 0.086956522 0.5 0.695652174 14 0 0 23 X:12681897-12681939 7 20.5 4397 FBgn0011837 4912.7 119.65 184.0333333 0.004172858 0.171333055 0.111392864 6 6 6 0.1 dme-miR-283-5p 6mer3-8 TGATAT X 12682267 12682272 + X_12682267_12682272_+ 0.999994525 0.999972547 0.999983536 1.56E-05 Tis11 FBtr0333756 12679239 12682554 X + 12682255 12682290 3'utr Tis11 FlyBase G60977.1 AATATTTTTCATTGATATCCGCCTTGGCAACAACAA 33 12682267 0.719034318 5 32 269 1 1.568201724 0.054054054 0.090909091 0.189189189 33 0 0 37 X:12682255-12682290 6 Tis11 FBtr0333756 12679239 12682554 TGATAT 6mer3-8 dme-miR-283-5p X + 12682246 12682291 3'utr Tis11 FlyBase G46041.1 ATATACCATAATATTTTTCATTGATATCCGCCTTGGCAACAACAAA 24 12682267 0.886689218 4 22 204 0.941176471 1.505149978 0.029411765 0.333333333 0.529411765 24 2 0 32 X:12682246-12682291 6 28 4398 FBgn0011837 4912.7 119.65 184.0333333 0.005699514 0.23401588 0.15214635 0 0 0 0.1 dme-miR-14-3p 6mer3-8 AAGACT X 12685370 12685375 - X_12685370_12685375_- 1 0.999999973 0.999999987 0 Smr FBtr0333768|FBtr0333767 12684201|12684201 12687299|12687299 X - 12685328 12685399 3'utr Smr FlyBase G66986.1 TATATGAAGTAAACAACAAACGCTAAGACTTATTCAACAAAACAAAAATTGTAAAATATTAAAAGATAAACG 45 12685367 0.950580424 4 43 191 0.947368421 1.73239376 0.052631579 0.266666667 0.421052632 45 3 0 54 X:12685328-12685399 6 Smr FBtr0333767|FBtr0333768 12684201|12684201 12687299|12687299 AAGACT 6mer3-8 dme-miR-14-3p X - 12685353 12685397 3'utr Smr FlyBase G50432.1 TATGAAGTAAACAACAAACGCTAAGACTTATTCAACAAAACAAAA 35 12685367 0.945735132 3 34 144 0.966666667 1.763427994 0 0.571428571 0.75 35 2 0 58 X:12685353-12685397 6 39.5 4399 FBgn0265523 12357.95 106.01 163.76 0.003196323 0.372606358 0.241206644 -8 -8 -8 0.1 dme-miR-317-3p 6mer3-8 TGTGTT X 12685739 12685744 - X_12685739_12685744_- 0.999996381 0.99999911 0.999997746 1.91E-06 Smr FBtr0333768|FBtr0333767 12684201|12684201 12687299|12687299 X - 12685708 12685756 3'utr Smr FlyBase G66987.1 ATGGAGCAAGATTGTGTTTTATTCCCTTCTTAGGCAAGCGCTATTGAAT 18 12685745 0.843340023 5 18 161 1 1.278753601 0.105263158 0.055555556 0.105263158 18 0 0 19 X:12685708-12685756 6 Smr FBtr0333767|FBtr0333768 12684201|12684201 12687299|12687299 TGTGTT 6mer3-8 dme-miR-317-3p X - 12685681 12685771 3'utr Smr FlyBase G50433.1 TGCAAGGCCTAATTTATGGAGCAAGATTGTGTTTTATTCCCTTCTTAGGCAAGCGCTATTGAATTATGTACGTTTAATTGCTAAGCTAATG 12 12685745 0.987012027 7 12 110 1 1.361727836 0.304347826 0.5 0.739130435 12 0 0 23 X:12685681-12685771 6 12.5 4400 FBgn0265523 12357.95 106.01 163.76 0.001011495 0.117913404 0.076331216 1 1 1 0.1 dme-miR-33-5p 6mer2-7 AATGCA X 12686503 12686508 - X_12686503_12686508_- 0.999911202 0.998125945 0.999018573 0.001262398 Smr FBtr0333765|FBtr0333768|FBtr0333766|FBtr0333767 12685999|12684201|12685999|12684201 12687299|12687299|12687299|12687299 X - 12686489 12686532 3'utr Smr FlyBase G66991.1 ATAAACAAATTGTGGATGCAGGAGAATGCAGACTAGCATAAAAC 5 12686522 0.921071968 4 5 20 1 0.77815125 0 0.2 0.333333333 5 0 0 6 X:12686489-12686532 6 Smr FBtr0333766|FBtr0333767|FBtr0333765|FBtr0333768 12685999|12684201|12685999|12684201 12687299|12687299|12687299|12687299 AATGCA 6mer2-7 dme-miR-33-5p X - 12686494 12686530 3'utr Smr FlyBase G50436.1 AAACAAATTGTGGATGCAGGAGAATGCAGACTAGCAT 5 12686506 0.984734109 2 4 13 1 0.84509804 0.571428571 0.5 0.714285714 4 0 0 7 X:12686494-12686530 6 3 4401 FBgn0265523 12357.95 106.01 163.76 0.000242759 0.028299217 0.018319492 14 -2 6 0.1 dme-miR-8-3p 7mer-A1 AGTATTA X 12757848 12757854 - X_12757848_12757854_- 0.793240222 0.823349562 0.808294892 0.021290561 ade5 FBtr0333799|FBtr0073705 12757034|12757758 12758051|12758051 X - 12757788 12757865 3'utr ade5 FlyBase G67033.1 ATTTTTTTATTAGTATTAGGAAAGCATGACTTCAACTTGTTGTACCACGTTCTTGACAGGTTACGAACTCGAAATAAC 25 12757826 0.98791879 11 22 196 0.888888889 1.380211242 0.037037037 0.08 0.148148148 25 3 0 24 X:12757788-12757865 7 ade5 FBtr0333799|FBtr0073705 12757034|12757758 12758051|12758051 AGTATTA 7mer-A1 dme-miR-8-3p X - 12757793 12757861 3'utr ade5 FlyBase G50462.1 TTTTATTAGTATTAGGAAAGCATGACTTCAACTTGTTGTACCACGTTCTTGACAGGTTACGAACTCGAA 27 12757826 0.822764096 11 27 183 1 1.579783597 0.026315789 0.333333333 0.526315789 27 0 0 38 X:12757793-12757861 7 13 4402 FBgn0020513 1857.626667 112.9666667 172.9033333 0.006998177 0.115078194 0.07518652 -28 -28 -28 0.1 dme-miR-282-5p 8mer-A1 AGAGGCTA X 12761082 12761089 - X_12761082_12761089_- 0.511643458 0.635062805 0.573353131 0.087270624 CG12717 FBtr0073704|FBtr0346120 12760876|12760640 12761297|12761297 X - 12761012 12761140 3'utr CG12717 FlyBase G67048.1 CATACACACATACAATCACCAAAAAGAGCAGTTCAGCCAACAAGACGATAAAGAGGCTACCTACTGGAGAGATAGAGACAGAGACAAAGACAGAGATCAGGATCACAGGATGAGCATGTTAGGCAGGAC 105 12761068 0.868430456 12 85 215 0.863247863 1.402261382 0.145299145 0.114285714 0.205128205 105 13 3 101 X:12761012-12761140 8 CG12717 FBtr0346120|FBtr0073704 12760640|12760876 12761297|12761297 AGAGGCTA 8mer-A1 dme-miR-282-5p X - 12761001 12761135 3'utr CG12717 FlyBase G50478.1 ACACATACAATCACCAAAAAGAGCAGTTCAGCCAACAAGACGATAAAGAGGCTACCTACTGGAGAGATAGAGACAGAGACAAAGACAGAGATCAGGATCACAGGATGAGCATGTTAGGCAGGACGAGGTGGATGT 56 12761068 0.99500798 10 49 110 0.894117647 1.579783597 0.094117647 0.392857143 0.6 56 8 1 76 X:12761001-12761135 8 29 4403 FBgn0030420 2125.08 87.28333333 134.6233333 0.013646545 0.332251289 0.215415852 -21 -21 -21 0.1 dme-miR-33-5p 6mer3-8 CAATGC X 12761223 12761228 - X_12761223_12761228_- 0.92692238 0.999913999 0.963418189 0.051612855 CG12717 FBtr0073704|FBtr0346120 12760876|12760640 12761297|12761297 X - 12761167 12761258 3'utr CG12717 FlyBase G67049.1 AAAACAACTGAACTGAAGACGATCGCAACGCAATGCTTTGGAACACTAGGAGGAGCAAATTGACACGGCGGAGATGGGTTCACCAGAAATAT 10 12761224 0.933125422 7 9 31 0.928571429 1.113943352 0.214285714 0.4 0.571428571 10 1 0 13 X:12761167-12761258 6 CG12717 FBtr0346120|FBtr0073704 12760640|12760876 12761297|12761297 CAATGC 6mer3-8 dme-miR-33-5p X - 12761215 12761243 3'utr CG12717 FlyBase G50479.1 AAGACGATCGCAACGCAATGCTTTGGAAC 6 12761223 0.644332462 3 5 16 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 X:12761215-12761243 6 4.5 4404 FBgn0030420 2125.08 87.28333333 134.6233333 0.002117567 0.051556234 0.033426598 -4 -5 -4.5 0.1 dme-miR-304-5p 7mer-m8 TGAGATT X 12774415 12774421 - X_12774415_12774421_- 0.620148655 0.620203442 0.620176048 3.87E-05 CG32647 FBtr0346126|FBtr0340412 12771842|12773579 12776672|12776672 X - 12774401 12774448 3'utr CG32647 FlyBase G67062.1 CAATGAAAATGAGAATGAGAATGAGAATGAGATTGAGAATGGCAGATT 21 12774421 0.834650828 3 20 91 1 1.361727836 0.652173913 0.095238095 0.173913043 21 0 0 23 X:12774401-12774448 7 CG32647 FBtr0340412|FBtr0346126 12773579|12771842 12776672|12776672 TGAGATT 7mer-m8 dme-miR-304-5p X - 12774386 12774439 3'utr CG32647 FlyBase G50490.1 TGAGAATGAGAATGAGAATGAGATTGAGAATGGCAGATTCGAAGCGCGCTTAAC 7 12774422 0.95822981 4 7 34 1 1.041392685 0.272727273 0.571428571 0.727272727 7 0 0 11 X:12774386-12774439 7 13 4405 FBgn0052647 26.80666667 0.936666667 1.47 0.484953992 13.87900356 8.843537415 0 1 0.5 0.1 dme-miR-1008-3p 7mer-A1 GCTGTGA X 12774791 12774797 - X_12774791_12774797_- 0.814330665 0.808179131 0.811254898 0.004349838 CG32647 FBtr0346126|FBtr0340412 12771842|12773579 12776672|12776672 X - 12774770 12774891 3'utr CG32647 FlyBase G67064.1 ATTTTTTTCCACTTGACAGCACATCAAAGCAAATTAAATTTAACAATAAATACATATATAAAATGCGGGATATCCGAGAAAAACGTGGAGTACGGCTGTGAAATTATGTTTGCTTTAAAATA 43 12774801 0.980161692 13 36 262 0.826086957 1.102662342 0.347826087 0.069767442 0.130434783 43 6 2 38 X:12774770-12774891 7 CG32647 FBtr0340412|FBtr0346126 12773579|12771842 12776672|12776672 GCTGTGA 7mer-A1 dme-miR-1008-3p X - 12774762 12774816 3'utr CG32647 FlyBase G50491.1 GAGAAAAACGTGGAGTACGGCTGTGAAATTATGTTTGCTTTAAAATACATAAACG 22 12774803 0.983087058 5 15 117 0.636363636 1.021189299 0.363636364 0.272727273 0.515151515 22 11 1 21 X:12774762-12774816 7 25.5 4406 FBgn0052647 26.80666667 0.936666667 1.47 0.951255906 27.22419929 17.34693878 4 6 5 0.1 dme-bantam-3p 6mer2-7 GATCTC X 12775110 12775115 - X_12775110_12775115_- 0.999847245 0.999909516 0.999878381 4.41E-05 CG32647 FBtr0346126|FBtr0340412 12771842|12773579 12776672|12776672 X - 12775063 12775131 3'utr CG32647 FlyBase G67065.1 CCCTTCAAGAAGAATAGATCTCGTTTCAACTTTAGGCTAATGACTCTGAAGCCATCTCCGTCTCTTTCT 54 12775108 0.975407675 7 52 329 0.970588235 1.819543936 0.058823529 0.222222222 0.382352941 54 2 0 66 X:12775063-12775131 6 CG32647 FBtr0340412|FBtr0346126 12773579|12771842 12776672|12776672 GATCTC 6mer2-7 dme-bantam-3p X - 12775058 12775128 3'utr CG32647 FlyBase G50492.1 TTCAAGAAGAATAGATCTCGTTTCAACTTTAGGCTAATGACTCTGAAGCCATCTCCGTCTCTTTCTATATA 31 12775108 0.975685273 5 30 194 0.975 1.591064607 0.025 0.258064516 0.425 31 1 0 39 X:12775058-12775128 6 39.5 4407 FBgn0052647 26.80666667 0.936666667 1.47 1.473514051 42.17081851 26.8707483 -7 -7 -7 0.1 dme-miR-190-5p 8mer-m1 ACATATCT X 12775537 12775544 - X_12775537_12775544_- 0.562852965 0.577172863 0.570012914 0.010125698 CG32647 FBtr0073702|FBtr0346126|FBtr0340412 12775494|12771842|12773579 12776672|12776672|12776672 X - 12775523 12775594 3'utr CG32647 FlyBase G67067.1 AGTGCGACAAAAAAAATCTCGATCTTAGTAATGGGTAGTAAATTACACATACATATCTTGGCAACATTTTTT 8 12775554 0.974486249 7 8 42 1 1 0.4 0.25 0.4 8 0 0 10 X:12775523-12775594 8 CG32647 FBtr0340412|FBtr0346126|FBtr0073702 12773579|12771842|12775494 12776672|12776672|12776672 ACATATCT 8mer-m1 dme-miR-190-5p X - 12775530 12775574 3'utr CG32647 FlyBase G50494.1 GATCTTAGTAATGGGTAGTAAATTACACATACATATCTTGGCAAC 5 12775537 0.962302616 2 4 28 1 0.698970004 0.2 0 0 5 0 0 5 X:12775530-12775574 8 3.5 4408 FBgn0052647 26.80666667 0.936666667 1.47 0.130564536 3.736654804 2.380952381 10 -7 1.5 0.1 dme-miR-1012-3p 6mer3-8 TTGACT X 12791334 12791339 - X_12791334_12791339_- 0.999919641 0.838342804 0.919131222 0.114252051 Pde9 FBtr0299635|FBtr0333525|FBtr0330395|FBtr0333524 12791138|12785561|12791138|12791138 12791754|12791754|12791463|12791754 X - 12791311 12791349 3'utr Pde9 FlyBase G67076.1 TTCACAGTCATTGACTTTTGCCTGGTAGCTTAGGTTTAC 22 12791332 0.679820463 5 21 198 0.928571429 1.414973348 0.035714286 0.272727273 0.428571429 22 2 0 26 X:12791311-12791349 6 Pde9 FBtr0299635|FBtr0333525|FBtr0330395|FBtr0333524 12791138|12785561|12791138|12791138 12791754|12791754|12791463|12791754 TTGACT 6mer3-8 dme-miR-1012-3p X - 12791264 12791347 3'utr Pde9 FlyBase G50497.1 CACAGTCATTGACTTTTGCCTGGTAGCTTAGGTTTACGTTTAACTCCTAGCAAATTACATTAGGTTTCCACTGATTTTACTCTC 20 12791332 0.867256915 9 20 180 1 1.505149978 0 0.35 0.59375 20 0 0 32 X:12791264-12791347 6 17.5 4409 FBgn0259171 464.15 8.2 12.59333333 0.037703329 2.134146341 1.38962414 -7 -7 -7 0.1 dme-miR-1008-3p 6mer3-8 AGCTGT X 12911753 12911758 + X_12911753_12911758_+ 0.999999662 1 0.999999831 2.12E-07 CG4645 FBtr0343649|FBtr0346316|FBtr0073692 12911708|12911708|12911708 12911897|12912070|12911897 X + 12911722 12911763 3'utr CG4645 FlyBase G60994.1 GAGAAACCAGTTCGTCAACGTCGCTGAACTAAGCTGTAAATT 5 12911733 0.91649001 5 5 29 1 0.698970004 0 0 0 5 0 0 5 X:12911722-12911763 6 CG4645 FBtr0346316 12911708 12912070 AGCTGT 6mer3-8 dme-miR-1008-3p X + 12911708 12911758 stop_codon CG4645 FlyBase G46056.1 AGGATGCATTCCGCGAGAAACCAGTTCGTCAACGTCGCTGAACTAAGCTGT 8 12911745 0.975208718 6 6 38 0.833333333 1 0.083333333 0.25 0.5 8 2 0 10 X:12911708-12911758 6 3 4410 FBgn0030435 142.39 10.84666667 16.51 0.021068895 0.276582667 0.181708056 20 8 14 0.1 dme-miR-932-5p 6mer3-8 GGAATT X 13079531 13079536 - X_13079531_13079536_- 0.999762752 0.999911654 0.999837203 0.000105288 hep FBtr0340303|FBtr0330396 13079203|13079203 13080428|13080401 X - 13079506 13079597 3'utr hep FlyBase G67100.1 TAAACATCAACTTGTATGCTGAGTGGAAGGGAAACCGACAAGAAACAACCACATTAACAATGGAATTATTGTACTGATTATTATAATTGTTT 91 13079529 0.991347451 14 84 949 0.916666667 1.694605199 0.148148148 0.142857143 0.277777778 91 8 1 99 X:13079506-13079597 6 hep FBtr0340303|FBtr0330396 13079203|13079203 13080428|13080401 GGAATT 6mer3-8 dme-miR-932-5p X - 13079506 13079539 3'utr hep FlyBase G50511.1 AATGGAATTATTGTACTGATTATTATAATTGTTT 63 13079530 0.719817724 8 59 707 0.964705882 1.612783857 0.105882353 0.26984127 0.458823529 63 2 1 82 X:13079506-13079539 6 71.5 4411 FBgn0010303 1946.036667 56.33 86.79333333 0.036741343 1.269305876 0.82379599 -7 -6 -6.5 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA X 13080078 13080083 - X_13080078_13080083_- 0.995961634 0.973552624 0.984757129 0.015845556 hep FBtr0340303|FBtr0330396|FBtr0330397|FBtr0073747 13079203|13079203|13079729|13079729 13080428|13080401|13084554|13080428 X - 13080041 13080109 3'utr hep FlyBase G67103.1 GAGCTGGATATCCGTGGACATGTGATTGATGACAAACGAAAGTGTTCAAAAGTCTTATACGTTTAAGTG 20 13080083 0.974423176 4 19 120 0.96 1.079181246 0.32 0.25 0.4 20 0 1 24 X:13080041-13080109 6 hep FBtr0330397|FBtr0073747|FBtr0340303|FBtr0330396 13079729|13079729|13079203|13079203 13084554|13080428|13080428|13080401 TGATGA 6mer3-8 dme-miR-2a-2-5p X - 13080066 13080120 3'utr hep FlyBase G50514.1 ATCGACGACCAGAGCTGGATATCCGTGGACATGTGATTGATGACAAACGAAAGTG 15 13080083 0.976702792 6 14 96 1 1.414973348 0.307692308 0.533333333 0.730769231 15 0 0 26 X:13080066-13080120 6 16 4412 FBgn0010303 1946.036667 56.33 86.79333333 0.008221839 0.284040476 0.184345956 0 0 0 0.1 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 13081902 13081909 - X_13081902_13081909_- 0.631136649 0.631132319 0.631134484 3.04E-06 hep FBtr0330397 13079729 13084554 X - 13081888 13081925 5'utr hep FlyBase G67104.1 ATCAACGCACTCCACCTCTAGTCAGTCCTCCACGCAGT 42 13081900 0.696249877 3 40 212 0.957446809 1.653212514 0.106382979 0.095238095 0.191489362 42 2 0 45 X:13081888-13081925 8 hep FBtr0330397 13079729 13084554 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X - 13081891 13081923 5'utr hep FlyBase G50515.1 CAACGCACTCCACCTCTAGTCAGTCCTCCACGC 19 13081900 0.734519201 4 19 94 1 1.51851394 0.121212121 0.421052632 0.666666667 19 0 0 33 X:13081891-13081923 8 30.5 4413 FBgn0010303 1946.036667 56.33 86.79333333 0.01567288 0.541452157 0.351409478 -9 -9 -9 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 13082443 13082448 - X_13082443_13082448_- 0.60757095 0.527311599 0.567441275 0.056751966 hep FBtr0330397 13079729 13084554 X - 13082414 13082474 5'utr hep FlyBase G67106.1 AACAACAATACCACTGCCGCACAACAACCAAACATTGATCACGGATGCAGCAACAGCAGCA 14 13082440 0.908901632 4 11 34 0.8125 1.113943352 0 0.142857143 0.25 14 3 0 13 X:13082414-13082474 6 hep FBtr0330397 13079729 13084554 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X - 13082405 13082460 5'utr hep FlyBase G50517.1 TGCCGCACAACAACCAAACATTGATCACGGATGCAGCAACAGCAGCAGCAGCGGCG 8 13082439 0.916582382 3 5 18 0.833333333 1 0 0.375 0.583333333 8 2 0 10 X:13082405-13082460 6 7 4414 FBgn0010303 1946.036667 56.33 86.79333333 0.003597055 0.124267708 0.080651356 -8 -9 -8.5 0.1 dme-miR-184-5p 6mer3-8 TGATAA X 13093894 13093899 + X_13093894_13093899_+ 0.995111406 0.999991034 0.99755122 0.003450398 lic FBtr0073720 13093377 13093986 X + 13093861 13093935 3'utr lic FlyBase G61003.1 AAGCATTGAATGTAAAAACGTACTAAACTTAAATGATAATTTGTGAACTTTTGAACACCAAAATAGTCGAAAAGA 7 13093901 0.989158966 5 6 53 1 1 0 0.428571429 0.6 7 0 0 10 X:13093861-13093935 6 lic FBtr0073720 13093377 13093986 TGATAA 6mer3-8 dme-miR-184-5p X + 13093856 13093922 3'utr lic FlyBase G46064.1 AAGCAAAGCATTGAATGTAAAAACGTACTAAACTTAAATGATAATTTGTGAACTTTTGAACACCAAA 8 13093909 0.966366118 5 6 39 1 1.041392685 0 0.375 0.545454545 8 0 0 11 X:13093856-13093922 6 4 4415 FBgn0261524 942.3333333 58.90333333 90.19666667 0.004244782 0.067907872 0.044347537 -7 -15 -11 0.1 dme-miR-1003-3p 7mer-A1 TGTGAGA X 13123232 13123238 - X_13123232_13123238_- 0.823260328 0.823074379 0.823167354 0.000131451 CG32638 FBtr0300453 13122874 13123472 X - 13123132 13123255 3'utr CG32638 FlyBase G67119.1 TTTTGTTAGTGCAATATTGTGAGAGAGACAACGATTAAGGTTAAGCATTGTAGTTAAATACGGCATCGGAATTTCATAAAGAAACGTGTAGGTGCGTGTTTTCCTTGTCCCATATACACAAACC 23 13123239 0.981113858 9 19 142 0.875 1.322219295 0.25 0.043478261 0.083333333 23 3 0 21 X:13123132-13123255 7 CG32638 FBtr0300453 13122874 13123472 TGTGAGA 7mer-A1 dme-miR-1003-3p X - 13123186 13123248 3'utr CG32638 FlyBase G50525.1 AGTGCAATATTGTGAGAGAGACAACGATTAAGGTTAAGCATTGTAGTTAAATACGGCATCGGA 14 13123239 0.891319201 6 13 73 0.95 0.977723605 0.35 0.357142857 0.55 14 0 1 19 X:13123186-13123248 7 11.5 4416 FBgn0052638 822.99 64.44 99.11666667 0.013973438 0.178460583 0.116024886 1 1 1 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA X 13123358 13123364 - X_13123358_13123364_- 0.815584877 0.815978293 0.815781585 0.000278176 CG32638 FBtr0300453 13122874 13123472 X - 13123321 13123436 3'utr CG32638 FlyBase G67120.1 ACACCACTACGATAATAGACAGCGGATTCCGCAATGGAACAGCAAAGACAACCCATGTGTAGAAAGACTTGACTAGTCAGTGTCGCTGCCGAAAGTAATCAGAATATTTGAATGCG 68 13123368 0.970191694 12 66 376 0.976190476 1.612783857 0.19047619 0.147058824 0.30952381 68 1 1 82 X:13123321-13123436 7 CG32638 FBtr0300453 13122874 13123472 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X - 13123331 13123391 3'utr CG32638 FlyBase G50526.1 AGACAACCCATGTGTAGAAAGACTTGACTAGTCAGTGTCGCTGCCGAAAGTAATCAGAATA 49 13123368 0.783315048 6 48 282 0.963855422 1.903089987 0.228915663 0.367346939 0.626506024 49 3 0 80 X:13123331-13123391 7 51 4417 FBgn0052638 822.99 64.44 99.11666667 0.061969161 0.791433892 0.514545149 4 4 4 0.1 dme-miR-932-5p 6mer2-7 GAATTG X 13130245 13130250 + X_13130245_13130250_+ 0.99979877 0.810679171 0.90523897 0.133727752 CG15717 FBtr0344608|FBtr0073723 13129976|13129976 13130290|13130290 X + 13130210 13130268 3'utr CG15717 FlyBase G61011.1 TATTCCAATTGTATTGCGAAAAGGTCCTTGAGTCTGAATTGTTTTTTTGATACTCTGTC 15 13130238 0.800488117 5 13 133 0.777777778 1.146128036 0.388888889 0.133333333 0.277777778 15 4 0 14 X:13130210-13130268 6 CG15717 FBtr0073723|FBtr0344608 13129976|13129976 13130290|13130290 GAATTG 6mer2-7 dme-miR-932-5p X + 13130211 13130253 3'utr CG15717 FlyBase G46073.1 ATTCCAATTGTATTGCGAAAAGGTCCTTGAGTCTGAATTGTTT 9 13130238 0.980641142 3 8 62 1 1 0.5 0.111111111 0.2 9 0 0 10 X:13130211-13130253 6 11 4418 FBgn0030451 195.7633333 20.76333333 31.87333333 0.056190298 0.529780061 0.345116085 7 7 7 0.1 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA X 13134356 13134362 + X_13134356_13134362_+ 0.823214581 0.802730688 0.812972634 0.014484305 CG15717 FBtr0339676 13129976 13134565 X + 13134274 13134385 3'utr CG15717 FlyBase G61016.1 CATCAATCATCGCGAGACTCTGACACAGTGGCATCTGGTCTTCTGGCTGGCGGCGGGCTTGAATATAGCCGGTAACTTCATCTACCTGATCTTCGCCAGCGCCGAGGAGCAA 39 13134354 0.983614642 12 37 285 0.953488372 1.311753861 0.302325581 0.102564103 0.186046512 39 1 1 41 X:13134274-13134385 7 CG15717 FBtr0339676 13129976 13134565 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" X + 13134300 13134382 3'utr CG15717 FlyBase G46077.1 AGTGGCATCTGGTCTTCTGGCTGGCGGCGGGCTTGAATATAGCCGGTAACTTCATCTACCTGATCTTCGCCAGCGCCGAGGAG 19 13134354 0.98484249 9 17 136 0.892857143 1.397940009 0.535714286 0.368421053 0.571428571 19 3 0 25 X:13134300-13134382 7 22.5 4419 FBgn0030451 195.7633333 20.76333333 31.87333333 0.1149347 1.083641034 0.705919264 2 2 2 0.1 dme-miR-999-3p 6mer2-7 GTTAAC X 13134635 13134640 + X_13134635_13134640_+ 0.998707928 1 0.999353964 0.000913653 MFS10 FBtr0339677 13134435 13134839 X + 13134594 13134656 3'utr MFS10 FlyBase G61019.1 GAAACTAGTGCTACCAAATCGGAATGGAAAATCGAAAGGATGTTAACTGTTTTAGTGTATTAT 12 13134618 0.900689136 7 12 69 1 1.146128036 0.428571429 0.166666667 0.285714286 12 0 0 14 X:13134594-13134656 6 MFS10 FBtr0339677 13134435 13134839 GTTAAC 6mer2-7 dme-miR-999-3p X + 13134590 13134690 3'utr MFS10 FlyBase G46079.1 GAACGAAACTAGTGCTACCAAATCGGAATGGAAAATCGAAAGGATGTTAACTGTTTTAGTGTATTATATACGTGTATCGTCCTTTTATATGGACTTTTGTT 15 13134635 0.989506652 10 14 126 0.954545455 1.322219295 0 0.333333333 0.545454545 15 1 0 21 X:13134590-13134690 6 6 4420 FBgn0030452 712.7033333 29.94 45.85666667 0.00841865 0.200400802 0.13084248 17 0 8.5 0.1 dme-miR-282-5p 6mer3-8 AGAGGC X 13195603 13195608 - X_13195603_13195608_- 0.999999999 0.999999982 0.999999991 0 sno FBtr0340488|FBtr0340489 13195497|13195497 13196279|13196279 X - 13195588 13195632 3'utr sno FlyBase G67136.1 TGTAAGTTTAACCAACAGACATTGAGAGGCATCTGAATATAAGTT 14 13195610 0.624036428 4 13 66 1 1.255272505 0 0.214285714 0.388888889 14 0 0 18 X:13195588-13195632 6 sno FBtr0340488|FBtr0340489 13195497|13195497 13196279|13196279 AGAGGC 6mer3-8 dme-miR-282-5p X - 13195582 13195629 3'utr sno FlyBase G50540.1 AAGTTTAACCAACAGACATTGAGAGGCATCTGAATATAAGTTAAGAAA 10 13195610 0.954004645 3 10 51 1 1.176091259 0 0.4 0.6 10 0 0 15 X:13195582-13195629 6 11.5 4421 FBgn0265630 1551.576667 31.13333333 47.87666667 0.007411816 0.369379015 0.240200515 2 2 2 0.1 dme-miR-965-3p 7mer-A1 ACGCTTA X 13195853 13195859 - X_13195853_13195859_- 0.822181254 0.821592331 0.821886792 0.000416486 sno FBtr0340488|FBtr0340489 13195497|13195497 13196279|13196279 X - 13195822 13195879 3'utr sno FlyBase G67137.1 ATATAGAGAACGAAATGTAAACGCTTATAAATGGACTTTTCTCAATGATTTAATGATT 253 13195848 0.811824095 9 247 2016 0.97740113 2.238046103 0.774011299 0.320158103 0.514124294 253 7 1 346 X:13195822-13195879 7 sno FBtr0340488|FBtr0340489 13195497|13195497 13196279|13196279 ACGCTTA 7mer-A1 dme-miR-965-3p X - 13195819 13195982 3'utr sno FlyBase G50541.1 TGTACAACCATAAACCCATCCATCAGACTTTGGCTCGTTATAGTTCATAGAAACACCACACTCACATACTGACACACGCGCAACGTACAGATGATATGATGACATATAGAGAACGAAATGTAAACGCTTATAAATGGACTTTTCTCAATGATTTAATGATTAAT 240 13195848 0.985028554 24 235 1897 0.979289941 2.519827994 0.639053254 0.3 0.50295858 240 7 0 331 X:13195819-13195982 7 227 4422 FBgn0265630 1551.576667 31.13333333 47.87666667 0.146302793 7.291220557 4.7413493 -11 -11 -11 0.1 dme-miR-970-3p 6mer3-8 TCTTAT X 13263897 13263902 - X_13263897_13263902_- 0.99336642 0.999659721 0.99651307 0.004450035 HDAC4 FBtr0308576|FBtr0333331|FBtr0301299|FBtr0073798|FBtr0301298|FBtr0333333|FBtr0333332|FBtr0333334 13263753|13262685|13263753|13263753|13262887|13262887|13262887|13262887 13264981|13264981|13264981|13264981|13264981|13264981|13264981|13264981 X - 13263866 13263924 3'utr HDAC4 FlyBase G67159.1 TTGTTGTTAAATGTTGCCGAGATCTTATATACGTATGTATACCTAATAACTGTTACAAT 20 13263911 0.754431872 6 20 189 1 1.322219295 0.523809524 0.05 0.095238095 20 0 0 21 X:13263866-13263924 6 HDAC4 FBtr0333334|FBtr0333332|FBtr0333333|FBtr0301298|FBtr0073798|FBtr0301299|FBtr0333331|FBtr0308576 13262887|13262887|13262887|13262887|13263753|13263753|13262685|13263753 13264981|13264981|13264981|13264981|13264981|13264981|13264981|13264981 TCTTAT 6mer3-8 dme-miR-970-3p X - 13263867 13263925 3'utr HDAC4 FlyBase G50549.1 TTTGTTGTTAAATGTTGCCGAGATCTTATATACGTATGTATACCTAATAACTGTTACAA 18 13263911 0.98392256 8 18 149 1 1.380211242 0.208333333 0.333333333 0.5 18 0 0 24 X:13263867-13263925 6 16.5 4423 FBgn0041210 5130.7 102.1166667 156.9133333 0.003215935 0.161579892 0.105153588 9 9 9 0.1 dme-miR-92b-3p 8mer-A1 GTGCAATA X 13263983 13263990 - X_13263983_13263990_- 0.628840307 0.628916018 0.628878162 5.35E-05 HDAC4 FBtr0308576|FBtr0333331|FBtr0301299|FBtr0073798|FBtr0301298|FBtr0333333|FBtr0333332|FBtr0333334 13263753|13262685|13263753|13263753|13262887|13262887|13262887|13262887 13264981|13264981|13264981|13264981|13264981|13264981|13264981|13264981 X - 13263968 13264002 3'utr HDAC4 FlyBase G67160.1 AAAATATATATTGTGCAATAAATGTGAGAAAATGA 6 13263991 0.724042958 4 6 35 1 0.77815125 0.333333333 0 0 6 0 0 6 X:13263968-13264002 8 HDAC4 FBtr0333334|FBtr0333332|FBtr0333333|FBtr0301298|FBtr0073798|FBtr0301299|FBtr0333331|FBtr0308576 13262887|13262887|13262887|13262887|13263753|13263753|13262685|13263753 13264981|13264981|13264981|13264981|13264981|13264981|13264981|13264981 GTGCAATA 8mer-A1 dme-miR-92b-3p X - 13263970 13264004 3'utr HDAC4 FlyBase G50550.1 AAAAAATATATATTGTGCAATAAATGTGAGAAAAT 5 13263992 0.901998704 3 5 37 1 0.903089987 0 0.4 0.625 5 0 0 8 X:13263970-13264004 8 5.5 4424 FBgn0041210 5130.7 102.1166667 156.9133333 0.001071978 0.053859964 0.035051196 1 2 1.5 0.1 dme-miR-305-5p 7mer-m8 AGTACAA X 13264060 13264066 - X_13264060_13264066_- 0.643266882 0.378363597 0.51081524 0.18731492 HDAC4 FBtr0308576|FBtr0333331|FBtr0301299|FBtr0073798|FBtr0301298|FBtr0333333|FBtr0333332|FBtr0333334 13263753|13262685|13263753|13263753|13262887|13262887|13262887|13262887 13264981|13264981|13264981|13264981|13264981|13264981|13264981|13264981 X - 13264053 13264108 3'utr HDAC4 FlyBase G67161.1 GAGAAATCTTTTTGTACAATTTATAGTTTAGTGCAAGTTTCAAGTACAACATGCTA 9 13264057 0.982605322 5 8 71 0.909090909 1 0.090909091 0.222222222 0.363636364 9 1 0 10 X:13264053-13264108 7 HDAC4 FBtr0333334|FBtr0333332|FBtr0333333|FBtr0301298|FBtr0073798|FBtr0301299|FBtr0333331|FBtr0308576 13262887|13262887|13262887|13262887|13263753|13263753|13262685|13263753 13264981|13264981|13264981|13264981|13264981|13264981|13264981|13264981 AGTACAA 7mer-m8 dme-miR-305-5p X - 13264041 13264108 3'utr HDAC4 FlyBase G50551.1 GAGAAATCTTTTTGTACAATTTATAGTTTAGTGCAAGTTTCAAGTACAACATGCTATTATTTAAAGAA 15 13264057 0.980721206 6 15 121 1 1.301029996 0.3 0.266666667 0.45 15 0 0 20 X:13264041-13264108 7 7.5 4425 FBgn0041210 5130.7 102.1166667 156.9133333 0.001461789 0.073445406 0.047797085 -9 -9 -9 0.1 dme-miR-980-5p 7mer-m1 AAAAACT X 13264145 13264151 - X_13264145_13264151_- 0.670797936 0.656536711 0.663667324 0.010084191 HDAC4 FBtr0308576|FBtr0333331|FBtr0301299|FBtr0073798|FBtr0301298|FBtr0333333|FBtr0333332|FBtr0333334 13263753|13262685|13263753|13263753|13262887|13262887|13262887|13262887 13264981|13264981|13264981|13264981|13264981|13264981|13264981|13264981 X - 13264115 13264221 3'utr HDAC4 FlyBase G67162.1 CAGAGATCGAGTGGGGAGTTGATTACATGTTATGTAGAATGCTTTAGTTGATAATAAGATATGAGAAAAAAAAAACTTAACAACTAACTAGTTGGATGAAAAGCGAA 34 13264144 0.972348381 12 31 200 0.904761905 1.579783597 0.238095238 0.235294118 0.380952381 34 4 0 38 X:13264115-13264221 7 HDAC4 FBtr0333334|FBtr0333332|FBtr0333333|FBtr0301298|FBtr0073798|FBtr0301299|FBtr0333331|FBtr0308576 13262887|13262887|13262887|13262887|13263753|13263753|13262685|13263753 13264981|13264981|13264981|13264981|13264981|13264981|13264981|13264981 AAAAACT 7mer-m1 dme-miR-980-5p X - 13264124 13264223 3'utr HDAC4 FlyBase G50552.1 TACAGAGATCGAGTGGGGAGTTGATTACATGTTATGTAGAATGCTTTAGTTGATAATAAGATATGAGAAAAAAAAAACTTAACAACTAACTAGTTGGATG 16 13264144 0.884821911 11 15 81 1 1.462397998 0.172413793 0.5625 0.75862069 16 0 0 29 X:13264124-13264223 7 10.5 4426 FBgn0041210 5130.7 102.1166667 156.9133333 0.002046504 0.102823568 0.06691592 -7 -7 -7 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG X 13264626 13264631 - X_13264626_13264631_- 0.974798413 0.964997641 0.969898027 0.006930212 HDAC4 FBtr0308576|FBtr0333331|FBtr0301299|FBtr0073798|FBtr0301298|FBtr0333333|FBtr0333332|FBtr0333334 13263753|13262685|13263753|13263753|13262887|13262887|13262887|13262887 13264981|13264981|13264981|13264981|13264981|13264981|13264981|13264981 X - 13264591 13264685 3'utr HDAC4 FlyBase G67164.1 TATAGGGGAACATGTCTAAAAGAAGCAGAACAGGGCCTAAAGTTCAAAATGGTGGCTGTGCCTCCAAAAGAAGAAATAATTATAATAATTAGAAA 136 13264633 0.970814674 8 135 778 0.993506494 1.883661435 0.116883117 0.125 0.227272727 136 0 1 153 X:13264591-13264685 6 HDAC4 FBtr0333334|FBtr0333332|FBtr0333333|FBtr0301298|FBtr0073798|FBtr0301299|FBtr0333331|FBtr0308576 13262887|13262887|13262887|13262887|13263753|13263753|13262685|13263753 13264981|13264981|13264981|13264981|13264981|13264981|13264981|13264981 GCTGTG 6mer2-7 dme-miR-1008-3p X - 13264592 13264659 3'utr HDAC4 FlyBase G50556.1 AGAACAGGGCCTAAAGTTCAAAATGGTGGCTGTGCCTCCAAAAGAAGAAATAATTATAATAATTAGAA 71 13264633 0.972695453 6 66 394 0.942307692 1.514104821 0.067307692 0.338028169 0.548076923 71 4 2 98 X:13264592-13264659 6 97.5 4427 FBgn0041210 5130.7 102.1166667 156.9133333 0.019003255 0.954790273 0.621362111 2 2 2 0.1 dme-miR-980-3p 6mer3-8 GGCAGC X 13287558 13287563 + X_13287558_13287563_+ 0.99999999 0.99999927 0.99999963 4.95E-07 CG15743 FBtr0346123|FBtr0333330|FBtr0073755 13287493|13287493|13287493 13287741|13287741|13287741 X + 13287535 13287584 3'utr CG15743 FlyBase G61049.1 AATCCCCTCGCCCACATCGTTTAGGCAGCATTCAAAAATAGCTTTAAGTT 41 13287556 0.770775241 6 40 263 0.97826087 1.653212514 0.043478261 0.097560976 0.195652174 41 1 0 45 X:13287535-13287584 6 CG15743 FBtr0073755|FBtr0333330|FBtr0346123 13287493|13287493|13287493 13287741|13287741|13287741 GGCAGC 6mer3-8 dme-miR-980-3p X + 13287516 13287577 3'utr CG15743 FlyBase G46096.1 TTCTAACCCTTCCCGAGGAAATCCCCTCGCCCACATCGTTTAGGCAGCATTCAAAAATAGCT 29 13287556 0.978587066 5 29 184 1 1.69019608 0 0.448275862 0.673469388 29 0 0 49 X:13287516-13287577 6 33 4428 FBgn0030465 244.6633333 20.01333333 30.50666667 0.134879222 1.648900733 1.081730769 2 2 2 0.1 dme-miR-307a-3p 7mer-m8 GGTTGTG X 13287661 13287667 + X_13287661_13287667_+ 0.702969625 0.702969544 0.702969585 7.07E-08 CG15743 FBtr0346123|FBtr0333330|FBtr0073755 13287493|13287493|13287493 13287741|13287741|13287741 X + 13287652 13287686 3'utr CG15743 FlyBase G61050.1 AATTACGTTGGTTGTGCGGCGGCGCGGCGGGGTCA 19 13287660 0.712804762 2 17 115 0.818181818 1.255272505 0.318181818 0.105263158 0.227272727 19 4 0 18 X:13287652-13287686 7 CG15743 FBtr0073755|FBtr0333330|FBtr0346123 13287493|13287493|13287493 13287741|13287741|13287741 GGTTGTG 7mer-m8 dme-miR-307a-3p X + 13287652 13287711 3'utr CG15743 FlyBase G46098.1 AATTACGTTGGTTGTGCGGCGGCGCGGCGGGGTCATGAACCCGGACCAAACCAAACCGCC 12 13287660 0.966796712 2 12 62 1 1.230448921 0.352941176 0.25 0.470588235 12 0 0 17 X:13287652-13287711 7 14.5 4429 FBgn0030465 244.6633333 20.01333333 30.50666667 0.059265113 0.724516989 0.475305944 1 1 1 0.1 dme-miR-1012-3p 6mer2-7 TGACTA X 13294202 13294207 + X_13294202_13294207_+ 0.993294884 0.999809373 0.996552129 0.004606447 CG15744 FBtr0073756 13293877 13294433 X + 13294088 13294221 3'utr CG15744 FlyBase G61056.1 ATATATATATATATGTATATATATGGGCAGTGGGCTTATATCTTAAGTTTCGCCCACTTAAAACCTAGCCAGCTAACTGAACTTGTAATTATAGTAAGGACTCCCTATTTATTATGACTAGTATTACTCCACAA 26 13294172 0.981870038 15 26 202 1 1.462397998 0.103448276 0.115384615 0.206896552 26 0 0 29 X:13294088-13294221 6 CG15744 FBtr0073756 13293877 13294433 TGACTA 6mer2-7 dme-miR-1012-3p X + 13294125 13294215 3'utr CG15744 FlyBase G46102.1 ATATCTTAAGTTTCGCCCACTTAAAACCTAGCCAGCTAACTGAACTTGTAATTATAGTAAGGACTCCCTATTTATTATGACTAGTATTACT 13 13294176 0.984352706 9 12 92 0.875 1.146128036 0.0625 0.230769231 0.375 13 2 0 14 X:13294125-13294215 6 5 4430 FBgn0030466 1200.416667 23.08666667 35.35 0.00416522 0.216575224 0.141442716 30 26 28 0.1 dme-miR-13b-2-5p 8mer-m1 TTTGACGC X 13294772 13294779 - X_13294772_13294779_- 0.618174459 0.618174493 0.618174476 0 CG1764 FBtr0339946|FBtr0073796 13294471|13294485 13294970|13294970 X - 13294706 13294872 3'utr CG1764 FlyBase G67187.1 CCCTGCTCTGTCCAGGCATCAGCAAAATTGTATTATCTTATTATAGTTTATACACACCATCTCTTGTTATTGTTACACAATTAAGATTAAACCTTTGACGCTAATCAAACTGATTGTCGCTGAGGCGTCGCTGCTGTTACTTTCCAGCTCATTGTTATTTTATAGGT 41 13294808 0.987971222 19 39 358 0.94 1.672097858 0.06 0.170731707 0.32 41 3 0 47 X:13294706-13294872 8 CG1764 FBtr0339946|FBtr0073796 13294471|13294485 13294970|13294970 TTTGACGC 8mer-m1 dme-miR-13b-2-5p X - 13294679 13294854 3'utr CG1764 FlyBase G50579.1 TCAGCAAAATTGTATTATCTTATTATAGTTTATACACACCATCTCTTGTTATTGTTACACAATTAAGATTAAACCTTTGACGCTAATCAAACTGATTGTCGCTGAGGCGTCGCTGCTGTTACTTTCCAGCTCATTGTTATTTTATAGGTTGTGTAATTCAATCAGAGTTGGAAAGT 32 13294758 0.982148016 12 30 233 0.955555556 1.633468456 0.066666667 0.3125 0.511111111 32 2 0 43 X:13294679-13294854 8 9 4431 FBgn0030467 288.8666667 25.22333333 38.49333333 0.031156243 0.356812475 0.23380672 29 -21 4 0.1 dme-miR-263a-5p 6mer2-7 TGCCAT X 13294919 13294924 - X_13294919_13294924_- 0.999905606 0.999665495 0.999785551 0.000169776 CG1764 FBtr0339946|FBtr0073796 13294471|13294485 13294970|13294970 X - 13294886 13294945 3'utr CG1764 FlyBase G67188.1 ACCGACCGGAGTGAGAAGCATTGCCATGAGAAACATGCACAACAGGCCCAAGGAGCAGGA 26 13294925 0.91769887 4 25 73 0.964285714 1.431363764 0.357142857 0.076923077 0.142857143 26 1 0 27 X:13294886-13294945 6 CG1764 FBtr0339946|FBtr0073796 13294471|13294485 13294970|13294970 TGCCAT 6mer2-7 dme-miR-263a-5p X - 13294886 13294943 3'utr CG1764 FlyBase G50580.1 CGACCGGAGTGAGAAGCATTGCCATGAGAAACATGCACAACAGGCCCAAGGAGCAGGA 11 13294925 0.916015605 2 10 32 0.923076923 1.079181246 0.461538462 0.181818182 0.307692308 11 1 0 12 X:13294886-13294943 6 17.5 4432 FBgn0030467 288.8666667 25.22333333 38.49333333 0.060581583 0.693802035 0.454624177 1 1 1 0.1 dme-miR-965-3p 6mer3-8 TACGCT X 13299842 13299847 + X_13299842_13299847_+ 0.996855174 0.999576888 0.998216031 0.001924533 CG1622 FBtr0073757|FBtr0310465|FBtr0339945 13299572|13298901|13297895 13299910|13299910|13299910 X + 13299821 13299861 3'utr CG1622 FlyBase G61063.1 TTTGTAATTTGTGACTACACTTACGCTGATAAAATAGTTTT 8 13299841 0.924473657 4 8 63 1 0.954242509 0 0.125 0.222222222 8 0 0 9 X:13299821-13299861 6 CG1622 FBtr0310465|FBtr0339945|FBtr0073757 13298901|13297895|13299572 13299910|13299910|13299910 TACGCT 6mer3-8 dme-miR-965-3p X + 13299781 13299861 3'utr CG1622 FlyBase G46105.1 CTAGACACAATCACATGCGGACACAGCAGCAAGGCTATATTTTGTAATTTGTGACTACACTTACGCTGATAAAATAGTTTT 10 13299841 0.973629031 5 10 60 1 1.113943352 0 0.3 0.461538462 10 0 0 13 X:13299781-13299861 6 7 4433 FBgn0030468 1094.686667 76.97333333 117.3766667 0.006394524 0.090940585 0.059637066 1 1 1 0.1 dme-miR-14-3p 8mer-A1 AAGACTGA X 13328933 13328940 + X_13328933_13328940_+ 0.643565469 0.643565463 0.643565466 0 IP3K2 FBtr0344168|FBtr0344171|FBtr0344170|FBtr0346133|FBtr0346134|FBtr0344169 13328764|13328764|13328764|13328764|13328764|13328764 13329069|13329303|13329303|13329303|13329303|13329303 X + 13328908 13328965 3'utr IP3K2 FlyBase G61091.1 ATTTAACCCCTTAAGTTTAAAATCAAAGACTGAAATCACAATATGCATACACATATTT 171 13328924 0.595304778 7 140 831 0.823232323 1.066059569 0.01010101 0.111111111 0.232323232 171 22 13 163 X:13328908-13328965 8 IP3K2 FBtr0344169|FBtr0346134|FBtr0346133|FBtr0344170|FBtr0344171|FBtr0344168 13328764|13328764|13328764|13328764|13328764|13328764 13329303|13329303|13329303|13329303|13329303|13329069 AAGACTGA 8mer-A1 dme-miR-14-3p X + 13328911 13328956 3'utr IP3K2 FlyBase G46128.1 TAACCCCTTAAGTTTAAAATCAAAGACTGAAATCACAATATGCATA 133 13328924 0.627803698 6 120 671 0.889473684 1.5289167 0 0.323308271 0.526315789 133 17 4 169 X:13328911-13328956 8 151.5 4434 FBgn0266375 946.9066667 46.57333333 71.42666667 0.159994649 3.25293444 2.121056562 9 9 9 0.1 dme-miR-1007-3p 7mer-A1 GAGCTTA X 13329213 13329219 + X_13329213_13329219_+ 0.82071269 0.757404841 0.789058765 0.044765445 IP3K2 FBtr0344171|FBtr0344170|FBtr0346133|FBtr0346134|FBtr0344169 13328764|13328764|13328764|13328764|13328764 13329303|13329303|13329303|13329303|13329303 X + 13329204 13329229 3'utr IP3K2 FlyBase G61094.1 ACGCAACAAGAGCTTAGACTAAGTTT 5 13329218 0.935195135 2 5 21 1 0.84509804 0 0.4 0.571428571 5 0 0 7 X:13329204-13329229 7 IP3K2 FBtr0344169|FBtr0346134|FBtr0346133|FBtr0344170|FBtr0344171 13328764|13328764|13328764|13328764|13328764 13329303|13329303|13329303|13329303|13329303 GAGCTTA 7mer-A1 dme-miR-1007-3p X + 13329088 13329241 3'utr IP3K2 FlyBase G46130.1 ATTCACGTTTGGCGAATCCTAGAGATACCCGAATGGCTGGAGATAATACCCACAAGGCAGTTGCAACTGTCGATCGTAACGATACGAAAAGTAACTAAGAAATGAACACACCCAACACGCAACAAGAGCTTAGACTAAGTTTTTAATATAATGG 16 13329218 0.999258056 9 16 75 1 1.397940009 0.16 0.5 0.68 16 0 0 25 X:13329088-13329241 7 4.5 4435 FBgn0266375 946.9066667 46.57333333 71.42666667 0.004752316 0.096621815 0.06300168 -5 -5 -5 0.1 dme-miR-184-3p 6mer2-7 CCGTCC X 13379599 13379604 + X_13379599_13379604_+ 0.992621839 0.876990482 0.93480616 0.081763676 CG1640 FBtr0073774|FBtr0073772|FBtr0073771|FBtr0073770|FBtr0073769|FBtr0339837|FBtr0073773 13379580|13379580|13379580|13379580|13379580|13379580|13379580 13380160|13380160|13380160|13380160|13380160|13380160|13380160 X + 13379576 13379650 stop_codon CG1640 FlyBase G61111.1 AAGTAGATCAGCTGCCAACTTCCCCGTCCTCGATCCCTGTGTTAAGTGTCAATCCTCCGGCTTAGGATTAAAAAT 45 13379608 0.759661754 15 40 308 0.907407407 1.389166084 0.12962963 0.2 0.333333333 45 4 1 49 X:13379576-13379650 6 CG1640 FBtr0339837|FBtr0073773|FBtr0073769|FBtr0073771|FBtr0073770|FBtr0073774|FBtr0073772 13379580|13379580|13379580|13379580|13379580|13379580|13379580 13380160|13380160|13380160|13380160|13380160|13380160|13380160 CCGTCC 6mer2-7 dme-miR-184-3p X + 13379569 13379653 stop_codon CG1640 FlyBase G46143.1 GAAGTACAAGTAGATCAGCTGCCAACTTCCCCGTCCTCGATCCCTGTGTTAAGTGTCAATCCTCCGGCTTAGGATTAAAAATTTA 30 13379609 0.765841305 11 27 225 0.904761905 1.579783597 0.261904762 0.366666667 0.547619048 30 4 0 38 X:13379569-13379653 6 26 4436 FBgn0030478 719.3333333 33.57333333 51.13 0.036144578 0.774424146 0.508507725 -9 -10 -9.5 0.1 dme-miR-14-3p 6mer3-8 AAGACT X 13380574 13380579 - X_13380574_13380579_- 0.999550968 0.999989888 0.999770428 0.000310349 Rbp1-like FBtr0339838 13380164 13380955 X - 13380555 13380596 3'utr Rbp1-like FlyBase G67198.1 ATTGGTTTTTAGGCCTTAAGACTTTGGTAGATTTTAATTCAG 23 13380572 0.768928257 6 23 241 1 1.431363764 0.074074074 0.130434783 0.259259259 23 0 0 27 X:13380555-13380596 6 Rbp1-like FBtr0339838 13380164 13380955 AAGACT 6mer3-8 dme-miR-14-3p X - 13380556 13380595 3'utr Rbp1-like FlyBase G50590.1 TTGGTTTTTAGGCCTTAAGACTTTGGTAGATTTTAATTCA 19 13380572 0.720135623 5 19 173 1 1.414973348 0.115384615 0.315789474 0.5 19 0 0 26 X:13380556-13380595 6 21 4437 FBgn0030479 464.9333333 40.22333333 61.53666667 0.045167766 0.522085025 0.341259953 -7 -7 -7 0.1 dme-miR-282-5p 6mer2-7 GAGGCT X 13386050 13386055 - X_13386050_13386055_- 0.999902661 0.99991418 0.99990842 8.13E-06 Yippee FBtr0073789|FBtr0100168 13385912|13385912 13386343|13386533 X - 13385940 13386168 3'utr Yippee FlyBase G67203.1 CCGCCACGGAGCACATGCGACTACGGCCCTGTCTTAACGTGACTTAAACGTAATTGTAGGCACATCTAGCACGTAAGCAGCTGCGGCGCCCAATTCTACCATTTAAATGTCATGAGGCTGAAGTGCTAAAACGAAAAAGATGGGCTGCTACTCAGCTGGAACATATTCGAAACTGATGATCCACACTTGTCTTTTTCAAACAAGATCTCTAGGCCGTAATCAATCAGCA 537 13386056 0.998371706 28 524 2786 0.986686391 2.347004579 0.022189349 0.2141527 0.375739645 537 7 2 667 X:13385940-13386168 6 Yippee FBtr0073789|FBtr0100168 13385912|13385912 13386343|13386533 GAGGCT 6mer2-7 dme-miR-282-5p X - 13385990 13386086 3'utr Yippee FlyBase G50594.1 GCGGCGCCCAATTCTACCATTTAAATGTCATGAGGCTGAAGTGCTAAAACGAAAAAGATGGGCTGCTACTCAGCTGGAACATATTCGAAACTGATGA 328 13386056 0.956721014 11 323 1521 0.992110454 2.701567985 0.007889546 0.402439024 0.613412229 328 4 0 503 X:13385990-13386086 6 363.5 4438 FBgn0026749 336.1966667 36.58666667 56.19666667 1.081212386 9.935313411 6.468355181 1 1 1 0.1 dme-miR-184-3p 6mer3-8 TCCGTC X 13386369 13386374 - X_13386369_13386374_- 0.999982859 0.999983858 0.999983358 7.07E-07 Yippee FBtr0100168 13385912 13386533 X - 13386332 13386390 stop_codon Yippee FlyBase G67205.1 CAGAGGCAGAGGGCTTTCCGTCGGAGGCCGCCACCACGAGTCATTGAGCCGATTGAATA 9 13386375 0.907862781 3 9 30 1 1 0.3 0.111111111 0.2 9 0 0 10 X:13386332-13386390 6 Yippee FBtr0100168 13385912 13386533 TCCGTC 6mer3-8 dme-miR-184-3p X - 13386335 13386388 stop_codon Yippee FlyBase G50597.1 GAGGCAGAGGGCTTTCCGTCGGAGGCCGCCACCACGAGTCATTGAGCCGATTGA 7 13386375 0.914543212 3 7 24 1 1 0.3 0.428571429 0.6 7 0 0 10 X:13386335-13386388 6 6.5 4439 FBgn0026749 336.1966667 36.58666667 56.19666667 0.019333922 0.17766035 0.115665223 1 1 1 0.1 dme-miR-304-5p 7mer-m8 TGAGATT X 13389068 13389074 + X_13389068_13389074_+ 0.581415519 0.620177092 0.600796306 0.02740859 CG1662 FBtr0342624 13388748 13389332 X + 13389034 13389084 3'utr CG1662 FlyBase G61116.1 CGGGCTAACAAACATGCGATGCGATGTGATGCGTTGAGATTGGAGGCGATG 7 13389068 0.959490653 4 7 35 1 0.954242509 0.444444444 0.142857143 0.333333333 7 0 0 9 X:13389034-13389084 7 CG1662 FBtr0342624 13388748 13389332 TGAGATT 7mer-m8 dme-miR-304-5p X + 13389059 13389084 3'utr CG1662 FlyBase G46147.1 GTGATGCGTTGAGATTGGAGGCGATG 5 13389067 0.708644764 3 4 24 0.833333333 0.698970004 0.5 0.2 0.333333333 5 1 0 5 X:13389059-13389084 7 5 4440 FBgn0030481 293.9633333 22.57333333 34.69666667 0.017008924 0.221500295 0.144106062 0 1 0.5 0.1 dme-miR-980-3p 6mer3-8 GGCAGC X 13389129 13389134 + X_13389129_13389134_+ 0.999126309 0.99999665 0.999561479 0.000615395 CG1662 FBtr0342624 13388748 13389332 X + 13389106 13389142 3'utr CG1662 FlyBase G61117.1 TTTTCACCTGATAAGCTCTGCTTGGCAGCGGTCTTAA 10 13389127 0.649378848 4 9 66 0.923076923 0.77815125 0.307692308 0.3 0.461538462 10 0 1 12 X:13389106-13389142 6 CG1662 FBtr0342624 13388748 13389332 GGCAGC 6mer3-8 dme-miR-980-3p X + 13389109 13389139 3'utr CG1662 FlyBase G46148.1 TCACCTGATAAGCTCTGCTTGGCAGCGGTCT 8 13389127 0.71628303 3 6 42 0.727272727 0.602059991 0.181818182 0.375 0.545454545 8 2 1 8 X:13389109-13389139 6 9 4441 FBgn0030481 293.9633333 22.57333333 34.69666667 0.030616063 0.398700532 0.259390912 2 2 2 0.1 dme-miR-7-5p 6mer2-7 TCTTCC X 13409149 13409154 + X_13409149_13409154_+ 0.999999947 0.999999827 0.999999887 7.07E-08 GstT4 FBtr0073778 13409034 13409323 X + 13409133 13409235 3'utr GstT4 FlyBase G61143.1 TTGTGATTATACTTGCTCTTCCTATCCAATAAGTCTTAGCCTTTCCATCACACTTGTTTTAACAATACCATTTGTGTCACGTAATGCTCATCTGTTTAAACGT 66 13409146 0.810226373 14 57 563 0.890243902 1.08517161 0.317073171 0.212121212 0.365853659 66 4 5 73 X:13409133-13409235 6 GstT4 FBtr0073778 13409034 13409323 TCTTCC 6mer2-7 dme-miR-7-5p X + 13409135 13409186 3'utr GstT4 FlyBase G46175.1 GTGATTATACTTGCTCTTCCTATCCAATAAGTCTTAGCCTTTCCATCACACT 27 13409146 0.708215918 9 25 238 0.9 1.255272505 0.05 0.37037037 0.575 27 3 1 36 X:13409135-13409186 6 26.5 4442 FBgn0030484 325.7333333 32.05333333 48.2 0.081354892 0.826747088 0.549792531 3 3 3 0.1 dme-miR-965-3p 8mer-A1 TACGCTTA X 13409307 13409314 + X_13409307_13409314_+ 0.618262491 0.588400726 0.603331608 0.021115481 GstT4 FBtr0073778 13409034 13409323 X + 13409251 13409325 3'utr GstT4 FlyBase G61144.1 AATCTTATATATAAACTTAGTTGTTAATTATGTATTTTAATTATTCGTATATAAAGTACGCTTATGTTTGTTTAA 47 13409307 0.989824585 7 43 431 0.95 1.45484486 0.183333333 0.255319149 0.416666667 47 2 1 57 X:13409251-13409325 8 GstT4 FBtr0073778 13409034 13409323 TACGCTTA 8mer-A1 dme-miR-965-3p X + 13409289 13409328 3'utr GstT4 FlyBase G46177.2 AATTATTCGTATATAAAGTACGCTTATGTTTGTTTAAATA 32 13409307 0.855569098 6 26 272 0.868421053 1.217483944 0.105263158 0.15625 0.289473684 32 4 1 33 X:13409289-13409328 8 37 4443 FBgn0030484 325.7333333 32.05333333 48.2 0.113589849 1.154326123 0.767634855 0 0 0 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT X 1344056 1344062 + X_1344056_1344062_+ 0.65899644 0.658936407 0.658966423 4.24E-05 CG11412 FBtr0310619|FBtr0070209 1343942|1343942 1344770|1344770 X + 1344005 1344106 3'utr CG11412 FlyBase G57908.1 GCGCTCTGCGGAGGACCAGGGCGCTCCCCTCGTCCTGGGTCCTGGCCAGCTGGCAGCTTGTATCGGCGCCCTCTTTTTTGTACCTATTTAACTAGGAAGCAT 21 1344055 0.983582594 7 21 161 1 1.380211242 0.083333333 0.142857143 0.25 21 0 0 24 X:1344005-1344106 7 CG11412 FBtr0070209|FBtr0310619 1343942|1343942 1344770|1344770 GGCAGCT 7mer-m8 dme-miR-980-3p X + 1344033 1344101 3'utr CG11412 FlyBase G43808.2 CTCGTCCTGGGTCCTGGCCAGCTGGCAGCTTGTATCGGCGCCCTCTTTTTTGTACCTATTTAACTAGGA 8 1344055 0.983836558 2 7 64 0.9 0.954242509 0 0.25 0.4 8 1 0 9 X:1344033-1344101 7 8.5 4444 FBgn0024362 306.67 16.69 25.75666667 0.02771709 0.509286998 0.330011647 1 1 1 0.1 dme-miR-184-3p 6mer2-7 CCGTCC X 1344140 1344145 + X_1344140_1344145_+ 0.994473679 0.973067611 0.983770645 0.015136398 CG11412 FBtr0310619|FBtr0070209 1343942|1343942 1344770|1344770 X + 1344110 1344156 3'utr CG11412 FlyBase G57909.1 AGCATCAGTTTATTTTCTCCCCAACTCACACCGTCCCTTGTCTCTCT 29 1344147 0.932375313 5 25 188 0.846153846 1.217483944 0.282051282 0.275862069 0.461538462 29 5 1 33 X:1344110-1344156 6 CG11412 FBtr0070209|FBtr0310619 1343942|1343942 1344770|1344770 CCGTCC 6mer2-7 dme-miR-184-3p X + 1344120 1344157 3'utr CG11412 FlyBase G43809.1 TATTTTCTCCCCAACTCACACCGTCCCTTGTCTCTCTT 25 1344147 0.745654689 5 22 182 0.921052632 0.942008053 0.263157895 0.48 0.657894737 25 0 3 35 X:1344120-1344157 6 25.5 4445 FBgn0024362 306.67 16.69 25.75666667 0.08315127 1.527860995 0.990034942 -7 -7 -7 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 1350142 1350148 - X_1350142_1350148_- 0.661905275 0.730390571 0.696147923 0.04842642 CG12773 FBtr0070235|FBtr0070235|FBtr0070235|FBtr0342738|FBtr0342738|FBtr0342738|FBtr0332287|FBtr0332287|FBtr0332287 1349885|1349885|1349885|1349621|1349621|1349621|1349885|1349885|1349885 1350877|1350877|1350877|1350877|1350877|1350877|1350877|1350877|1350877 X - 1350127 1350162 3'utr CG12773 FlyBase G63979.1 TTCGAGGAGACATATGTGATACTGAGATAATAAGTG 19 1350140 0.777748911 3 17 97 0.962962963 1.414973348 0.518518519 0.263157895 0.481481481 19 1 0 26 X:1350127-1350162 7 CG12773 FBtr0332287|FBtr0332287|FBtr0332287|FBtr0342738|FBtr0342738|FBtr0342738|FBtr0070235|FBtr0070235|FBtr0070235 1349885|1349885|1349885|1349621|1349621|1349621|1349885|1349885|1349885 1350877|1350877|1350877|1350877|1350877|1350877|1350877|1350877|1350877 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 1350117 1350162 3'utr CG12773 FlyBase G48228.1 TTCGAGGAGACATATGTGATACTGAGATAATAAGTGAAACCAAAAC 17 1350140 0.925374563 3 17 93 1 1.361727836 0.47826087 0.352941176 0.52173913 17 0 0 23 X:1350117-1350162 7 18 4446 FBgn0024365 573.3566667 17.87333333 27.26333333 0.031394071 1.007086908 0.660227412 -8 -8 -8 0.1 dme-miR-276a-3p 6mer2-7 GTTCCT X 1350263 1350268 - X_1350263_1350268_- 0.934031831 0.751259258 0.842645544 0.129239674 CG12773 FBtr0070235|FBtr0342738|FBtr0332287 1349885|1349621|1349885 1350877|1350877|1350877 X - 1350223 1350281 3'utr CG12773 FlyBase G63980.1 ATTCTTTCGATGTGTTCCTTGCTCTCGTAGTTCTTCAACGATTACTCCTTAGTTGAGAG 10 1350262 0.867142976 4 9 99 0.923076923 1.079181246 0 0.3 0.461538462 10 1 0 12 X:1350223-1350281 6 CG12773 FBtr0332287|FBtr0342738|FBtr0070235 1349885|1349621|1349885 1350877|1350877|1350877 GTTCCT 6mer2-7 dme-miR-276a-3p X - 1350241 1350286 3'utr CG12773 FlyBase G48229.1 TTCGCATTCTTTCGATGTGTTCCTTGCTCTCGTAGTTCTTCAACGA 7 1350262 0.989628485 4 7 77 1 0.84509804 0 0 0 7 0 0 7 X:1350241-1350286 6 6.5 4447 FBgn0024365 573.3566667 17.87333333 27.26333333 0.011336748 0.363670272 0.238415454 -6 -6 -6 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 1350580 1350585 - X_1350580_1350585_- 0.999821619 0.942519945 0.971170782 0.040518421 CG12773 FBtr0070235|FBtr0070235|FBtr0070235|FBtr0342738|FBtr0342738|FBtr0342738|FBtr0332287|FBtr0332287|FBtr0332287 1349885|1349885|1349885|1349621|1349621|1349621|1349885|1349885|1349885 1350877|1350877|1350877|1350877|1350877|1350877|1350877|1350877|1350877 X - 1350424 1350682 3'utr CG12773 FlyBase G63982.1 TGTATTTGATGTATAGTTAGGATAGCGACAGCTGAGGTCACGATGGTAGTATTCCAAACTCGGTCTTAGTTCGTTTTGCTTTAACAAAATTTGGAGTCTGTGACGCATTTTAACTGGGACTCTCCCACGATGTAGTGCTTAGATAAGAAAATGTTGATAGTGTATTGATTTTTAGCTTTTTACTAGTTGTTAAAACGTTCGGAGGTCAGCCAAATCAGAGCACATTTCAGTTGCGGAGGCTCCATTCTGACCACAGCTG 29 1350592 0.981713208 19 28 224 0.96875 1.491361694 0.28125 0.103448276 0.1875 29 1 0 31 X:1350424-1350682 6 CG12773 FBtr0332287|FBtr0332287|FBtr0332287|FBtr0342738|FBtr0342738|FBtr0342738|FBtr0070235|FBtr0070235|FBtr0070235 1349885|1349885|1349885|1349621|1349621|1349621|1349885|1349885|1349885 1350877|1350877|1350877|1350877|1350877|1350877|1350877|1350877|1350877 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X - 1350568 1350610 3'utr CG12773 FlyBase G48231.1 GTTTTGCTTTAACAAAATTTGGAGTCTGTGACGCATTTTAACT 11 1350582 0.771061075 5 11 82 1 1.230448921 0.294117647 0.363636364 0.588235294 11 0 0 17 X:1350568-1350610 6 9 4448 FBgn0024365 573.3566667 17.87333333 27.26333333 0.015697036 0.503543454 0.330113706 7 -3 2 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG X 1350806 1350811 - X_1350806_1350811_- 0.998604895 0.999697795 0.999151345 0.000772797 CG12773 FBtr0070235|FBtr0342738|FBtr0332287 1349885|1349621|1349885 1350877|1350877|1350877 X - 1350792 1350846 3'utr CG12773 FlyBase G63984.1 CTGTATGCGGGCCGGGCAACGGGGCAGGCGGCGTGGCTGTGGAAAGCAATAGTCG 70 1350813 0.958741793 3 61 146 0.934210526 1.374137094 0.302631579 0.057142857 0.131578947 70 3 2 71 X:1350792-1350846 6 CG12773 FBtr0332287|FBtr0342738|FBtr0070235 1349885|1349621|1349885 1350877|1350877|1350877 GCTGTG 6mer2-7 dme-miR-1008-3p X - 1350774 1350841 3'utr CG12773 FlyBase G48233.1 TGCGGGCCGGGCAACGGGGCAGGCGGCGTGGCTGTGGAAAGCAATAGTCGAGTGCATTTCTCTACCGC 75 1350813 0.962742969 3 73 159 0.991869919 2.086359831 0.333333333 0.466666667 0.674796748 75 1 0 122 X:1350774-1350841 6 68 4449 FBgn0024365 573.3566667 17.87333333 27.26333333 0.118599824 3.804550541 2.494192444 2 2 2 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA X 1356596 1356603 - X_1356596_1356603_- 0.500120278 0.500120184 0.500120231 7.07E-08 png FBtr0070234 1356486 1356657 X - 1356536 1356629 3'utr png FlyBase G63997.1 GAGGAGACCTCAACAAATATTTCATTGTACTTAAGAACTAGGCTAGCTTAAGCGATAAATTAAGGTGTGTGCTGTGCTTTGTGTGCGCCTGTGC 20 1356604 0.989153272 7 19 183 0.956521739 1.342422681 0.043478261 0.1 0.217391304 20 1 0 22 X:1356536-1356629 8 png FBtr0070234 1356486 1356657 GTACTTAA 8mer-A1 dme-miR-252-5p X - 1356575 1356618 3'utr png FlyBase G48241.1 AACAAATATTTCATTGTACTTAAGAACTAGGCTAGCTTAAGCGA 7 1356604 0.703754787 4 7 54 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 X:1356575-1356618 8 11 4450 FBgn0000826 56.66666667 6.136666667 9.246666667 0.194117647 1.792504074 1.18961788 1 1 1 0.1 dme-miR-317-3p 7mer-A1 GTGTTCA X 13590874 13590880 + X_13590874_13590880_+ 0.823349349 0.823347806 0.823348577 1.06E-06 Tango13 FBtr0310433|FBtr0333723|FBtr0310432 13590373|13589952|13589952 13593224|13591760|13591760 X + 13590846 13590891 3'utr Tango13 FlyBase G61163.1 TTACTATTACCTTGATTACCAGCTAATCGTGTTCAATTGATAAGCT 44 13590872 0.792006086 8 39 425 0.867924528 1.361727836 0.433962264 0.159090909 0.301886792 44 6 1 46 X:13590846-13590891 7 Tango13 FBtr0310432|FBtr0333723|FBtr0310433 13589952|13589952|13590373 13591760|13591760|13593224 GTGTTCA 7mer-A1 dme-miR-317-3p X + 13590829 13590892 3'utr Tango13 FlyBase G46192.1 TGAAATGGTCAGTACAATTACTATTACCTTGATTACCAGCTAATCGTGTTCAATTGATAAGCTA 45 13590872 0.776597679 11 33 431 0.777777778 1.799340549 0.580246914 0.488888889 0.716049383 45 18 0 63 X:13590829-13590892 7 40 4451 FBgn0086674 1960.31 48.50666667 74.51333333 0.020404936 0.824628917 0.536816677 2 2 2 0.1 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA X 13591393 13591399 + X_13591393_13591399_+ 0.676623592 0.558791856 0.617707724 0.083319594 Tango13 FBtr0310433|FBtr0333723|FBtr0310432 13590373|13589952|13589952 13593224|13591760|13591760 X + 13591311 13591432 3'utr Tango13 FlyBase G61165.1 CCCCCCCTTTTTTTTGTATCTGTAATTGTGTACATAAAATATAAATATCTGAATTATGTTTCCCACTAATCGAATGAATCTCTACCTGAAATTCGTCTATGGGCTCGCGGAATCTTTATAGG 28 13591410 0.984451581 10 25 207 0.914285714 1.505149978 0.371428571 0.178571429 0.342857143 28 3 0 32 X:13591311-13591432 7 Tango13 FBtr0310432|FBtr0333723|FBtr0310433 13589952|13589952|13590373 13591760|13591760|13593224 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" X + 13591342 13591433 3'utr Tango13 FlyBase G46194.1 ACATAAAATATAAATATCTGAATTATGTTTCCCACTAATCGAATGAATCTCTACCTGAAATTCGTCTATGGGCTCGCGGAATCTTTATAGGT 21 13591410 0.980789256 5 21 153 1 1.447158031 0.357142857 0.285714286 0.464285714 21 0 0 28 X:13591342-13591433 7 14 4452 FBgn0086674 1960.31 48.50666667 74.51333333 0.007141728 0.288620121 0.187885837 -17 -17 -17 0.1 dme-miR-1012-3p 6mer3-8 TTGACT X 13591665 13591670 + X_13591665_13591670_+ 0.985038214 0.99630578 0.990671997 0.007967396 Tango13 FBtr0310433|FBtr0333723|FBtr0310432 13590373|13589952|13589952 13593224|13591760|13591760 X + 13591639 13591677 3'utr Tango13 FlyBase G61167.1 AACTTTTTTTTTTGTGTTGCAATAAATTGACTGAATGTA 22 13591665 0.866909578 6 21 185 0.92 1.361727836 0.4 0.136363636 0.24 22 2 0 23 X:13591639-13591677 6 Tango13 FBtr0310432|FBtr0333723|FBtr0310433 13589952|13589952|13590373 13591760|13591760|13593224 TTGACT 6mer3-8 dme-miR-1012-3p X + 13591646 13591686 3'utr Tango13 FlyBase G46196.1 TTTTTTGTGTTGCAATAAATTGACTGAATGTAAAGAAAACC 21 13591664 0.723449522 6 21 152 1 1.477121255 0.333333333 0.428571429 0.6 21 0 0 30 X:13591646-13591686 6 21.5 4453 FBgn0086674 1960.31 48.50666667 74.51333333 0.010967653 0.443238043 0.288538964 0 1 0.5 0.1 dme-miR-252-5p 7mer-m8 GTACTTA X 13592253 13592259 + X_13592253_13592259_+ 0.56077147 0.587545313 0.574158392 0.018931936 Tango13 FBtr0310433 13590373 13593224 X + 13592190 13592285 3'utr Tango13 FlyBase G61168.1 AGACACACGAGCCTTGTCCGTCCTAACTGCTGTGTGTGTGGGCGAACGGGATGGCTATATTATGTACTTACTTGCCGTTAGCTTTGTGCTCAAAGA 51 13592252 0.95608359 8 48 466 0.963636364 1.72427587 0.4 0.078431373 0.145454545 51 2 0 53 X:13592190-13592285 7 Tango13 FBtr0310433 13590373 13593224 GTACTTA 7mer-m8 dme-miR-252-5p X + 13592227 13592272 3'utr Tango13 FlyBase G46197.1 GTGGGCGAACGGGATGGCTATATTATGTACTTACTTGCCGTTAGCT 19 13592252 0.987410824 3 18 186 0.966666667 1.462397998 0.5 0.368421053 0.6 19 1 0 29 X:13592227-13592272 7 28.5 4454 FBgn0086674 1960.31 48.50666667 74.51333333 0.014538517 0.587548103 0.382481882 1 1 1 0.1 dme-miR-31a-5p 6mer2-7 CTTGCC X 13609379 13609384 + X_13609379_13609384_+ 0.875729619 0.999928246 0.937828932 0.087821672 CG11178 FBtr0073805|FBtr0345128 13608910|13608910 13609529|13609529 X + 13609351 13609422 3'utr CG11178 FlyBase G61176.1 ATTTATAGATACCTACGCTTAAGTTACCCTTGCCGTATTTACCCACCACTCAGTGTATACATATGTATAACC 21 13609380 0.983350508 6 19 148 0.958333333 1.06069784 0.041666667 0.095238095 0.208333333 21 0 1 23 X:13609351-13609422 6 CG11178 FBtr0345128|FBtr0073805 13608910|13608910 13609529|13609529 CTTGCC 6mer2-7 dme-miR-31a-5p X + 13609357 13609447 3'utr CG11178 FlyBase G46203.1 AGATACCTACGCTTAAGTTACCCTTGCCGTATTTACCCACCACTCAGTGTATACATATGTATAACCATGTAAAGCTAAACCGTTCCAAGTG 11 13609381 0.978469815 5 11 80 1 1.230448921 0.058823529 0.454545455 0.647058824 11 0 0 17 X:13609357-13609447 6 11.5 4455 FBgn0030499 466.3333333 18.44 28.13 0.024660472 0.623644252 0.40881621 -1 -2 -1.5 0.1 dme-miR-14-3p 6mer3-8 AAGACT X 13660541 13660546 + X_13660541_13660546_+ 1 1 1 0 NFAT FBtr0301451 13658114 13661942 X + 13660491 13660578 3'utr NFAT FlyBase G61197.1 AGTGAAAGGCACTCGGATTTTACGGACCTCTCCCTTAGCAATCCCCTTCCAAGACTTATTCTCAGAAACCTGACCTAGGATTAAGAGG 14 13660549 0.98117135 8 13 99 0.933333333 1.146128036 0.4 0.071428571 0.133333333 14 1 0 14 X:13660491-13660578 6 NFAT FBtr0301451 13658114 13661942 AAGACT 6mer3-8 dme-miR-14-3p X + 13660513 13660564 3'utr NFAT FlyBase G46216.1 CGGACCTCTCCCTTAGCAATCCCCTTCCAAGACTTATTCTCAGAAACCTGAC 10 13660549 0.977973821 5 10 70 1 1.113943352 0.076923077 0.2 0.384615385 10 0 0 13 X:13660513-13660564 6 9.5 4456 FBgn0030505 2159.646667 45.51666667 69.65666667 0.004398868 0.208714756 0.136383213 -8 -8 -8 0.1 dme-miR-34-5p 7mer-A1 ACTGCCA X 13663145 13663151 + X_13663145_13663151_+ 0.769911386 0.778576385 0.774243886 0.00612708 NFAT FBtr0073808|FBtr0301450|FBtr0345127|FBtr0301449|FBtr0340396|FBtr0112980 13662758|13662758|13662758|13662758|13658114|13662758 13663657|13663657|13663657|13664568|13663657|13663657 X + 13663092 13663172 5'utr NFAT FlyBase G61209.1 AAAAAACAAATGATGAACTTATCTCAAAAGGTTAAATTAAAACAATGATAACGACTGCCATATACCTATGAAATATGAAGT 65 13663138 0.747232815 10 58 328 0.890243902 1.86332286 0.085365854 0.169230769 0.341463415 65 9 0 73 X:13663092-13663172 7 NFAT FBtr0301449|FBtr0340396|FBtr0112980|FBtr0073808|FBtr0301450|FBtr0345127 13662758|13658114|13662758|13662758|13662758|13662758 13664568|13663657|13663657|13663657|13663657|13663657 ACTGCCA 7mer-A1 dme-miR-34-5p X + 13663099 13663185 5'utr NFAT FlyBase G46224.1 AAATGATGAACTTATCTCAAAAGGTTAAATTAAAACAATGATAACGACTGCCATATACCTATGAAATATGAAGTGAAATCCCGAAAG 46 13663139 0.969119468 9 43 235 0.9375 1.477121255 0.09375 0.391304348 0.5625 46 3 1 60 X:13663099-13663185 7 35.5 4457 FBgn0030505 2159.646667 45.51666667 69.65666667 0.016437874 0.77993409 0.509642532 7 6 6.5 0.1 dme-miR-14-3p 6mer3-8 AAGACT X 13663533 13663538 + X_13663533_13663538_+ 0.99201447 0.991540327 0.991777399 0.00033531 NFAT FBtr0073808|FBtr0301450|FBtr0345127|FBtr0301449|FBtr0340396|FBtr0112980 13662758|13662758|13662758|13662758|13658114|13662758 13663657|13663657|13663657|13664568|13663657|13663657 X + 13663495 13663561 5'utr NFAT FlyBase G61211.1 TGTAGCTACGAATATAATGAATATGCGAGAAATTCCAAAAGACTTTTGATTTAAAGAAAATGCAATT 146 13663540 0.644073639 9 143 939 0.983516484 2.252853031 0.115384615 0.178082192 0.340659341 146 3 0 179 X:13663495-13663561 6 NFAT FBtr0301449|FBtr0340396|FBtr0112980|FBtr0073808|FBtr0301450|FBtr0345127 13662758|13658114|13662758|13662758|13662758|13662758 13664568|13663657|13663657|13663657|13663657|13663657 AAGACT 6mer3-8 dme-miR-14-3p X + 13663502 13663553 5'utr NFAT FlyBase G46226.1 ACGAATATAATGAATATGCGAGAAATTCCAAAAGACTTTTGATTTAAAGAAA 96 13663540 0.625608967 8 94 619 0.985815603 2.1430148 0.113475177 0.364583333 0.567375887 96 2 0 139 X:13663502-13663553 6 112.5 4458 FBgn0030505 2159.646667 45.51666667 69.65666667 0.052091855 2.471622116 1.615064363 -7 -7 -7 0.1 dme-miR-932-5p 6mer2-7 GAATTG X 13664246 13664251 + X_13664246_13664251_+ 1 1 1 0 NFAT FBtr0301449 13662758 13664568 X + 13664217 13664266 3'utr NFAT FlyBase G61214.2 GAGAGAGAGAGCGAAGAGCTCGCGCTTAAGAATTGTTAGTGTTAAATGTT 66 13664252 0.982067367 6 63 547 0.96 1.857332496 0.493333333 0.106060606 0.213333333 66 3 0 72 X:13664217-13664266 6 NFAT FBtr0301449 13662758 13664568 GAATTG 6mer2-7 dme-miR-932-5p X + 13664216 13664265 3'utr NFAT FlyBase G46229.1 AGAGAGAGAGAGCGAAGAGCTCGCGCTTAAGAATTGTTAGTGTTAAATGT 31 13664252 0.983544032 4 30 233 0.977777778 1.643452676 0.511111111 0.419354839 0.6 31 1 0 44 X:13664216-13664265 6 46 4459 FBgn0030505 2159.646667 45.51666667 69.65666667 0.021299781 1.010618821 0.660381873 -6 -6 -6 0.1 dme-miR-31a-5p 6mer3-8 TCTTGC X 13684305 13684310 + X_13684305_13684310_+ 0.635263757 0.870851039 0.753057398 0.166585307 CG11158 FBtr0073812 13684066 13684616 X + 13684284 13684319 3'utr CG11158 FlyBase G61216.1 CGAGTGATTGGCCAAATGATCTCTTGCATCACTATA 8 13684300 0.807112288 2 8 58 1 1.079181246 0.25 0.375 0.583333333 8 0 0 12 X:13684284-13684319 6 CG11158 FBtr0073812 13684066 13684616 TCTTGC 6mer3-8 dme-miR-31a-5p X + 13684282 13684317 3'utr CG11158 FlyBase G46230.1 TACGAGTGATTGGCCAAATGATCTCTTGCATCACTA 11 13684300 0.78245223 3 11 81 1 1.380211242 0 0.636363636 0.833333333 11 0 0 24 X:13684282-13684317 6 9.5 4460 FBgn0030511 119.0866667 8.99 13.68666667 0.079773834 1.0567297 0.694106186 5 5 5 0.1 dme-miR-1006-3p 6mer2-7 GAATTT X 13684451 13684456 - X_13684451_13684456_- 1 1 1 0 CG9940 FBtr0073844 13684378 13685808 X - 13684417 13684478 3'utr CG9940 FlyBase G67256.1 ATGTAGATTTATAGCACATTGTGAATTTGAACACTCGCATCAGATCGATTTAATGGAACACT 12 13684460 0.986281462 5 12 102 1 1.146128036 0.071428571 0.166666667 0.285714286 12 0 0 14 X:13684417-13684478 6 CG9940 FBtr0073844 13684378 13685808 GAATTT 6mer2-7 dme-miR-1006-3p X - 13684442 13684482 3'utr CG9940 FlyBase G50633.1 AAGCATGTAGATTTATAGCACATTGTGAATTTGAACACTCG 7 13684452 0.847391069 5 7 58 1 1.113943352 0 0.428571429 0.692307692 7 0 0 13 X:13684442-13684482 6 8.5 4461 FBgn0030512 1001.65 27.86666667 42.76666667 0.008485998 0.305023923 0.198752923 4 -4 0 0.1 dme-miR-307a-3p 7mer-m8 GGTTGTG X 13685072 13685078 - X_13685072_13685078_- 0.702972034 0.702972035 0.702972034 0 CG9940 FBtr0343352|FBtr0073844|FBtr0073845 13684551|13684378|13684551 13685808|13685808|13685808 X - 13685060 13685087 3'utr CG9940 FlyBase G67258.1 TGTGTTATTGGTTGTGTACGGTGCGGCT 6 13685073 0.656934328 3 5 56 1 0.954242509 0.444444444 0.333333333 0.555555556 6 0 0 9 X:13685060-13685087 7 CG9940 FBtr0073845|FBtr0343352|FBtr0073844 13684551|13684551|13684378 13685808|13685808|13685808 GGTTGTG 7mer-m8 dme-miR-307a-3p X - 13685059 13685088 3'utr CG9940 FlyBase G50634.1 TTGTGTTATTGGTTGTGTACGGTGCGGCTT 5 13685079 0.739103348 2 3 45 0.5 0.602059991 0.125 0.4 0.625 5 4 0 4 X:13685059-13685088 7 5 4462 FBgn0030512 1001.65 27.86666667 42.76666667 0.004991764 0.179425837 0.116913484 -5 1 -2 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 13717793 13717798 + X_13717793_13717798_+ 0.999786206 0.999637381 0.999711794 0.000105217 NnaD FBtr0340678|FBtr0340680|FBtr0340679 13717605|13717605|13717605 13717835|13717835|13717835 X + 13717776 13717808 3'utr NnaD FlyBase G61229.1 ATGTAAACCCGATCTCTGTACCTACAGTTAATC 9 13717792 0.833073886 2 8 52 0.888888889 0.903089987 0 0 0 9 1 0 8 X:13717776-13717808 6 NnaD FBtr0340680|FBtr0340678|FBtr0340679 13717605|13717605|13717605 13717835|13717835|13717835 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X + 13717749 13717802 3'utr NnaD FlyBase G46244.1 TAACACCTATAGGCGTATTTTATGCATATGTAAACCCGATCTCTGTACCTACAG 9 13717792 0.967355905 4 9 53 1 1.146128036 0.285714286 0.333333333 0.571428571 9 0 0 14 X:13717749-13717802 6 8 4463 FBgn0265726 100.7866667 2.52 3.85 0.079375579 3.174603175 2.077922078 1 1 1 0.1 dme-miR-79-3p 7mer-m8 TAGCTTT X 13719126 13719132 - X_13719126_13719132_- 0.620203697 0.62020403 0.620203864 2.12E-07 CG9941 FBtr0073843 13718732 13719175 X - 13719108 13719151 3'utr CG9941 FlyBase G67268.2 GAAATTCGTTTTCTCGTTTTAGCTTTGCGTTTATACTATTTATT 11 13719130 0.610710672 4 8 125 0.866666667 1.113943352 0.333333333 0.181818182 0.4 11 2 0 13 X:13719108-13719151 7 CG9941 FBtr0073843 13718732 13719175 TAGCTTT 7mer-m8 dme-miR-79-3p X - 13719086 13719145 3'utr CG9941 FlyBase G50639.1 CGTTTTCTCGTTTTAGCTTTGCGTTTATACTATTTATTCGGAGTTCACCTAGATTTAGTT 6 13719133 0.98966561 4 6 60 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 X:13719086-13719145 7 6.5 4464 FBgn0030514 1053.746667 41.08333333 63.20333333 0.006168466 0.15821501 0.102842677 -2 1 -0.5 0.1 dme-miR-252-5p 6mer3-8 GTACTT X 13736651 13736656 - X_13736651_13736656_- 0.979894053 0.991652335 0.985773194 0.008314303 Grip91 FBtr0073841 13736568 13737101 X - 13736648 13736701 3'utr Grip91 FlyBase G67296.1 TTGCCAATTGCCATGTTGTAATTAAAGAGAATAAGAGAATGTTACGTACTTTAA 12 13736660 0.670756566 5 12 65 1 1.176091259 0.066666667 0.083333333 0.266666667 12 0 0 15 X:13736648-13736701 6 Grip91 FBtr0073841 13736568 13737101 GTACTT 6mer3-8 dme-miR-252-5p X - 13736649 13736698 3'utr Grip91 FlyBase G50655.1 CCAATTGCCATGTTGTAATTAAAGAGAATAAGAGAATGTTACGTACTTTA 6 13736660 0.962655713 3 5 29 1 1 0 0.5 0.7 6 0 0 10 X:13736649-13736698 6 5 4465 FBgn0001612 613.5433333 20.81666667 31.92333333 0.008149384 0.240192154 0.156625248 4 4 4 0.1 dme-miR-79-3p 6mer2-7 AGCTTT X 13736887 13736892 - X_13736887_13736892_- 0.999999997 0.999988988 0.999994492 7.78E-06 Grip91 FBtr0073841 13736568 13737101 X - 13736861 13736900 3'utr Grip91 FlyBase G67297.1 ATATCTCAAGCTTTGCCGTCAATCGCCTGGCTGCAAGCCA 13 13736887 0.677060716 5 13 74 1 1.230448921 0.117647059 0.230769231 0.411764706 13 0 0 17 X:13736861-13736900 6 Grip91 FBtr0073841 13736568 13737101 AGCTTT 6mer2-7 dme-miR-79-3p X - 13736822 13736892 3'utr Grip91 FlyBase G50656.1 AGCTTTGCCGTCAATCGCCTGGCTGCAAGCCATCAACTTAAGATATCTCCAATACAAAATTATTGAGTAGT 6 13736889 0.97645154 5 6 39 1 0.954242509 0 0.5 0.666666667 6 0 0 9 X:13736822-13736892 6 7.5 4466 FBgn0001612 613.5433333 20.81666667 31.92333333 0.012224075 0.360288231 0.234937872 -5 -3 -4 0.1 dme-miR-980-3p 6mer3-8 GGCAGC X 1373777 1373782 + X_1373777_1373782_+ 0.999994096 0.999993512 0.999993804 4.24E-07 ssx FBtr0339773|FBtr0339774|FBtr0339772|FBtr0070215 1373350|1373114|1371989|1373114 1374677|1375257|1374677|1374677 X + 1373766 1373795 3'utr ssx FlyBase G57923.1 ATCCAAGCATTGGCAGCAAGAGGCAAAGCA 6 1373776 0.635036294 2 6 7 1 0.903089987 0.25 0.166666667 0.375 6 0 0 8 X:1373766-1373795 6 ssx FBtr0339772|FBtr0070215|FBtr0339773|FBtr0339774 1371989|1373114|1373350|1373114 1374677|1374677|1374677|1375257 GGCAGC 6mer3-8 dme-miR-980-3p X + 1373763 1373801 3'utr ssx FlyBase G43819.1 CAAATCCAAGCATTGGCAGCAAGAGGCAAAGCAAAGGTG 16 1373776 0.704403669 2 15 24 0.96 1.380211242 0.08 0.4375 0.64 16 1 0 24 X:1373763-1373801 6 11 4467 FBgn0024987 898.8266667 36.91666667 56.86333333 0.012238177 0.297968397 0.193446275 1 1 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG X 1373900 1373905 + X_1373900_1373905_+ 0.999274912 0.999275883 0.999275397 7.07E-07 ssx FBtr0339773|FBtr0339774|FBtr0339772|FBtr0070215 1373350|1373114|1371989|1373114 1374677|1375257|1374677|1374677 X + 1373878 1373909 3'utr ssx FlyBase G57924.1 TTAAGATGTACGAAATAATGTTCCAAAGTTAA 7 1373896 0.683887484 2 6 38 0.875 0.84509804 0.125 0.142857143 0.25 7 1 0 7 X:1373878-1373909 6 ssx FBtr0339772|FBtr0070215|FBtr0339773|FBtr0339774 1371989|1373114|1373350|1373114 1374677|1374677|1374677|1375257 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" X + 1373836 1373910 3'utr ssx FlyBase G43820.1 TCACAGAATTAAGCAGAGCAAATTAAAGATGCATAGCGTGTATTAAGATGTACGAAATAATGTTCCAAAGTTAAC 7 1373897 0.96243298 5 6 37 1 1.204119983 0.3125 0.857142857 0.9375 7 0 0 16 X:1373836-1373910 6 5.5 4468 FBgn0024987 898.8266667 36.91666667 56.86333333 0.006119089 0.148984199 0.096723137 4 3 3.5 0.1 dme-miR-965-3p 6mer2-7 ACGCTT X 1374281 1374286 + X_1374281_1374286_+ 0.961698972 0.974915753 0.968307363 0.009345689 ssx FBtr0339773|FBtr0339774|FBtr0339772|FBtr0070215 1373350|1373114|1371989|1373114 1374677|1375257|1374677|1374677 X + 1374246 1374328 3'utr ssx FlyBase G57926.1 TATAGAGAGACGAACCTTATGACAACAGACAGAAGACGCTTGCTCTGAATAGATGGTTAATTTGTAGACTTATAAGGAACGTC 47 1374286 0.97678676 10 46 299 0.981132075 1.716003344 0.245283019 0.085106383 0.188679245 47 1 0 52 X:1374246-1374328 6 ssx FBtr0339772|FBtr0070215|FBtr0339773|FBtr0339774 1371989|1373114|1373350|1373114 1374677|1374677|1374677|1375257 ACGCTT 6mer2-7 dme-miR-965-3p X + 1374264 1374329 3'utr ssx FlyBase G43822.1 ATGACAACAGACAGAAGACGCTTGCTCTGAATAGATGGTTAATTTGTAGACTTATAAGGAACGTCG 33 1374286 0.967248522 7 32 175 0.959183673 1.672097858 0.346938776 0.393939394 0.591836735 33 2 0 47 X:1374264-1374329 6 33.5 4469 FBgn0024987 898.8266667 36.91666667 56.86333333 0.037270812 0.90744921 0.589131837 -5 -5 -5 0.1 dme-miR-2535b-3p 8mer-A1 CCGTGAGA X 1374558 1374565 + X_1374558_1374565_+ 0.641793678 0.641820158 0.641806918 1.87E-05 ssx FBtr0339773|FBtr0339774|FBtr0339772|FBtr0070215 1373350|1373114|1371989|1373114 1374677|1375257|1374677|1374677 X + 1374454 1374582 3'utr ssx FlyBase G57928.1 ATGAATGATGTATAAATACCCGAACTTCGGGTAAACTTCCAACAGAAACCCGACAAGAAGATGGCTGAATATGAAATAAACTTGAAATTTTCCAACCAGCATACCCGTGAGACCCAGAGGTCCGAAATT 36 1374555 0.964340804 9 36 119 1 1.643452676 0.25 0.166666667 0.318181818 36 0 0 44 X:1374454-1374582 8 ssx FBtr0339772|FBtr0070215|FBtr0339773|FBtr0339774 1371989|1373114|1373350|1373114 1374677|1374677|1374677|1375257 CCGTGAGA 8mer-A1 dme-miR-2535b-3p X + 1374537 1374579 3'utr ssx FlyBase G43824.1 GAAATTTTCCAACCAGCATACCCGTGAGACCCAGAGGTCCGAA 14 1374555 0.837149664 3 11 36 0.8 1.204119983 0.05 0.357142857 0.55 14 4 0 16 X:1374537-1374579 8 16 4470 FBgn0024987 898.8266667 36.91666667 56.86333333 0.017800985 0.433408578 0.2813764 3 3 3 0.1 dme-miR-14-3p 6mer3-8 AAGACT X 13745760 13745765 - X_13745760_13745765_- 0.906869385 0.776622441 0.841745913 0.092098537 Pdcd4 FBtr0331711|FBtr0331712|FBtr0112981 13745575|13745575|13745575 13746775|13746775|13746775 X - 13745741 13745789 3'utr Pdcd4 FlyBase G67308.1 AGCTGCATTTTATATGATAAGAAAAAGACTTTGTTTTCGCCGCACTTAT 115 13745758 0.636319753 12 113 739 0.993243243 1.866287339 0.047297297 0.234782609 0.405405405 115 0 1 147 X:13745741-13745789 6 Pdcd4 FBtr0112981|FBtr0331712|FBtr0331711 13745575|13745575|13745575 13746775|13746775|13746775 AAGACT 6mer3-8 dme-miR-14-3p X - 13745660 13745858 3'utr Pdcd4 FlyBase G50663.1 CTTTATACGTATATTTACCCACGGATTCATCTTATTCTGCTTGCTTTTTTTTTTTTTTGATTGAATAAAAGCTGCATTTTATATGATAAGAAAAAGACTTTGTTTTCGCCGCACTTATATTTTAAAATGTTCACACTTCATGAAGAAACAAAATTCGACATATTCTTAAAAATGCGCGCCCACACATCTATATATATTT 102 13745758 0.984229031 26 97 758 0.966216216 2.155336037 0.081081081 0.323529412 0.533783784 102 5 0 143 X:13745660-13745858 6 83 4471 FBgn0030520 6370.806667 230.15 350.2466667 0.013028177 0.360634369 0.236975846 -7 -7 -7 0.1 dme-miR-1012-3p 6mer3-8 TTGACT X 13745971 13745976 - X_13745971_13745976_- 0.999222489 0.988090624 0.993656557 0.007871442 Pdcd4 FBtr0331711|FBtr0331712|FBtr0112981 13745575|13745575|13745575 13746775|13746775|13746775 X - 13745958 13746027 3'utr Pdcd4 FlyBase G67310.1 TTATGCTATCAACGCAATCAAAACTCTGATGATTACACAAAACAAATTCCATTGACTTGAAATTGAGAAA 19 13745976 0.973292224 8 18 110 0.956521739 1.342422681 0.043478261 0.210526316 0.347826087 19 1 0 22 X:13745958-13746027 6 Pdcd4 FBtr0112981|FBtr0331712|FBtr0331711 13745575|13745575|13745575 13746775|13746775|13746775 TTGACT 6mer3-8 dme-miR-1012-3p X - 13745963 13746013 3'utr Pdcd4 FlyBase G50665.1 CAATCAAAACTCTGATGATTACACAAAACAAATTCCATTGACTTGAAATTG 12 13745979 0.756968307 7 12 67 1 1.278753601 0 0.25 0.526315789 12 0 0 19 X:13745963-13746013 6 10 4472 FBgn0030520 6370.806667 230.15 350.2466667 0.00156966 0.043449924 0.028551307 0 3 1.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC X 1374620 1374625 + X_1374620_1374625_+ 0.999999727 1 0.999999863 2.12E-07 ssx FBtr0339773|FBtr0339774|FBtr0339772|FBtr0070215 1373350|1373114|1371989|1373114 1374677|1375257|1374677|1374677 X + 1374606 1374660 3'utr ssx FlyBase G57929.1 TCTAAACGTAAATCCTAGTCTCGTAGCAATATCATAGTTAAGGTGACTTTTTTTT 15 1374618 0.722758516 5 14 108 0.952380952 1.301029996 0.238095238 0.2 0.428571429 15 1 0 20 X:1374606-1374660 6 ssx FBtr0339772|FBtr0070215|FBtr0339773|FBtr0339774 1371989|1373114|1373350|1373114 1374677|1374677|1374677|1375257 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" X + 1374584 1374649 3'utr ssx FlyBase G43825.1 TTTTTTTTTAGTATTGATAATCTCTAAACGTAAATCCTAGTCTCGTAGCAATATCATAGTTAAGGT 11 1374626 0.985095887 4 9 80 0.833333333 1.176091259 0.166666667 0.545454545 0.722222222 11 3 0 15 X:1374584-1374649 6 10 4473 FBgn0024987 898.8266667 36.91666667 56.86333333 0.011125616 0.270880361 0.17586025 2 -6 -2 0.1 dme-bantam-3p 7mer-m8 TGATCTC X 13746439 13746445 - X_13746439_13746445_- 0.653940861 0.658870964 0.656405913 0.003486107 Pdcd4 FBtr0331711|FBtr0331712|FBtr0112981 13745575|13745575|13745575 13746775|13746775|13746775 X - 13746421 13746471 3'utr Pdcd4 FlyBase G67313.2 AAAAAAACAAACAATCAATCGGAATTTGATCTCCGTTTAAACTATATTCAT 243 13746446 0.79898818 11 230 2021 0.962068966 1.968482949 0.065517241 0.164609053 0.3 243 9 2 279 X:13746421-13746471 7 Pdcd4 FBtr0112981|FBtr0331712|FBtr0331711 13745575|13745575|13745575 13746775|13746775|13746775 TGATCTC 7mer-m8 dme-bantam-3p X - 13746389 13746469 3'utr Pdcd4 FlyBase G50669.1 AAAAACAAACAATCAATCGGAATTTGATCTCCGTTTAAACTATATTCATTATTATACTACATAAACACCTACAACGTATAT 169 13746446 0.985687804 11 166 1380 0.966942149 2.369215857 0.074380165 0.349112426 0.545454545 169 8 0 234 X:13746389-13746469 7 201.5 4474 FBgn0030520 6370.806667 230.15 350.2466667 0.031628648 0.875515968 0.57530883 1 1 1 0.1 dme-miR-184-5p 6mer3-8 TGATAA X 13746543 13746548 - X_13746543_13746548_- 0.99983462 0.999999932 0.999917276 0.000116885 Pdcd4 FBtr0331711|FBtr0331712|FBtr0112981 13745575|13745575|13745575 13746775|13746775|13746775 X - 13746502 13746563 3'utr Pdcd4 FlyBase G67314.1 AATTTGTCGCAAACTTGATAAAAAGAACTTATCCTCAGAATCCAGATAAGGACACAAACGAA 26 13746549 0.96228468 6 23 118 0.90625 1.161368002 0.15625 0.192307692 0.34375 26 2 1 29 X:13746502-13746563 6 Pdcd4 FBtr0112981|FBtr0331712|FBtr0331711 13745575|13745575|13745575 13746775|13746775|13746775 TGATAA 6mer3-8 dme-miR-184-5p X - 13746508 13746561 3'utr Pdcd4 FlyBase G50670.1 TTTGTCGCAAACTTGATAAAAAGAACTTATCCTCAGAATCCAGATAAGGACACA 19 13746549 0.758555152 7 19 108 1 1.431363764 0.185185185 0.368421053 0.555555556 19 0 0 27 X:13746508-13746561 6 15.5 4475 FBgn0030520 6370.806667 230.15 350.2466667 0.002432973 0.067347382 0.044254525 1 1 1 0.1 dme-miR-317-3p 6mer3-8 TGTGTT X 13774084 13774089 + X_13774084_13774089_+ 0.999988688 0.993719648 0.996854168 0.004432923 rdgB FBtr0301532 13773981 13775189 X + 13774000 13774106 3'utr rdgB FlyBase G61262.1 CTGGCGCTGCTAGAGACGATCCACTGTACAGAGCGCACCCACTGTAACGCCCGATCCTCGCTGTGTATATATGTATCCTGTGTTTGTGTTTAGTGTAAATAGGTCAA 8 13774085 0.991785123 5 6 64 0.888888889 0.903089987 0.111111111 0.125 0.222222222 8 1 0 8 X:13774000-13774106 6 rdgB FBtr0301532 13773981 13775189 TGTGTT 6mer3-8 dme-miR-317-3p X + 13774029 13774107 3'utr rdgB FlyBase G46264.1 AGAGCGCACCCACTGTAACGCCCGATCCTCGCTGTGTATATATGTATCCTGTGTTTGTGTTTAGTGTAAATAGGTCAAC 9 13774083 0.988262605 7 8 75 0.875 1.146128036 0.5625 0.666666667 0.8125 9 2 0 14 X:13774029-13774107 6 5 4476 FBgn0003218 381.5 8.42 12.83 0.01310616 0.593824228 0.389711613 -1 1 0 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 13774428 13774433 + X_13774428_13774433_+ 0.999939803 1 0.999969901 4.26E-05 rdgB FBtr0301532|FBtr0301532|FBtr0301532 13773981|13773981|13773981 13775189|13775189|13775189 X + 13774388 13774453 3'utr rdgB FlyBase G61263.1 ATTCCATTGGAAACTGCTTTGTTGGTGTTTAGACATTTTTCTGTGACTTTCTGTTGTTCTCTGTTT 8 13774449 0.99426576 5 7 92 0.777777778 0.84509804 0.111111111 0.125 0.222222222 8 2 0 7 X:13774388-13774453 6 rdgB FBtr0301532|FBtr0301532|FBtr0301532 13773981|13773981|13773981 13775189|13775189|13775189 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X + 13774395 13774452 3'utr rdgB FlyBase G46265.1 TGGAAACTGCTTTGTTGGTGTTTAGACATTTTTCTGTGACTTTCTGTTGTTCTCTGTT 6 13774437 0.992424449 6 6 75 1 1 0.5 0.333333333 0.6 6 0 0 10 X:13774395-13774452 6 6 4477 FBgn0003218 381.5 8.42 12.83 0.015727392 0.712589074 0.467653936 -21 -9 -15 0.1 dme-miR-8-3p 6mer2-7 AGTATT X 13780036 13780041 - X_13780036_13780041_- 0.979848482 0.942948247 0.961398364 0.026092452 CtsB1 FBtr0073838|FBtr0346091 13780014|13779845 13780176|13780176 X - 13780015 13780130 3'utr CtsB1 FlyBase G67327.1 ATTTTCTATCATCCCTCCTTTTATTTTCATTCCGATTCGCAACTGACGTTTGTAGTTAATGTAAACAACCTAAACCTGATTGATAATAAAGTATTGTATATGACTGTGGAACTGTA 221 13780060 0.897414174 26 207 1495 0.925531915 1.51355052 0.088652482 0.20361991 0.375886525 221 14 7 261 X:13780015-13780130 6 CtsB1 FBtr0346091|FBtr0073838 13779845|13780014 13780176|13780176 AGTATT 6mer2-7 dme-miR-8-3p X - 13780015 13780130 3'utr CtsB1 FlyBase G50687.1 ATTTTCTATCATCCCTCCTTTTATTTTCATTCCGATTCGCAACTGACGTTTGTAGTTAATGTAAACAACCTAAACCTGATTGATAATAAAGTATTGTATATGACTGTGGAACTGTA 136 13780051 0.81546364 23 128 896 0.930348259 2.271841607 0.084577114 0.338235294 0.552238806 136 14 0 187 X:13780015-13780130 6 76.5 4478 FBgn0030521 559.3 47.37666667 71.83333333 0.136778116 1.614718919 1.064965197 19 10 14.5 0.1 dme-miR-283-5p 6mer3-8 TGATAT X 13780145 13780150 - X_13780145_13780150_- 0.999769112 0.99987489 0.999822001 7.48E-05 CtsB1 FBtr0073838|FBtr0346091 13780014|13779845 13780176|13780176 X - 13780134 13780209 stop_codon CtsB1 FlyBase G67328.1 AGCTCCATTTCGGCGGGTCTGCCCAAGCTGTAAATGTTATATGTATTCCGGCATCAAGCTGATATATCAAAACCCC 31 13780150 0.972610876 8 29 169 0.941176471 1.505149978 0.088235294 0.096774194 0.176470588 31 2 0 32 X:13780134-13780209 6 CtsB1 FBtr0346091|FBtr0073838 13779845|13780014 13780176|13780176 TGATAT 6mer3-8 dme-miR-283-5p X - 13780134 13780204 stop_codon CtsB1 FlyBase G50688.1 CATTTCGGCGGGTCTGCCCAAGCTGTAAATGTTATATGTATTCCGGCATCAAGCTGATATATCAAAACCCC 24 13780150 0.958309393 7 24 116 1 1.505149978 0.09375 0.291666667 0.46875 24 0 0 32 X:13780134-13780204 6 22 4479 FBgn0030521 559.3 47.37666667 71.83333333 0.039334883 0.464363611 0.306264501 0 0 0 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 13807165 13807171 + X_13807165_13807171_+ 0.661615511 0.661615511 0.661615511 0 inaE FBtr0073826 13805478 13807627 X + 13807148 13807187 3'utr inaE FlyBase G61282.1 AATTATGTTAAACGTTATCTAGTCTAAGGCCAACTATCGC 7 13807172 0.973002182 4 7 45 1 0.84509804 0 0 0 7 0 0 7 X:13807148-13807187 7 inaE FBtr0073826 13805478 13807627 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X + 13807152 13807187 3'utr inaE FlyBase G46278.1 ATGTTAAACGTTATCTAGTCTAAGGCCAACTATCGC 5 13807172 0.970308173 3 4 29 1 0.903089987 0 0.4 0.625 5 0 0 8 X:13807152-13807187 7 5 4480 FBgn0261244 812.34 24.45 37.46 0.006155058 0.204498978 0.133475707 -7 -7 -7 0.1 dme-miR-277-3p 7mer-m8 TGCATTT X 13807495 13807501 + X_13807495_13807501_+ 0.620202611 0.607997412 0.614100012 0.00863038 inaE FBtr0073826 13805478 13807627 X + 13807483 13807520 3'utr inaE FlyBase G61284.1 ACAGATGTAATTTGCATTTCGTTTTCAAAATCTCCGTG 6 13807494 0.922686575 2 5 49 0.833333333 0.698970004 0.166666667 0 0 6 1 0 5 X:13807483-13807520 7 inaE FBtr0073826 13805478 13807627 TGCATTT 7mer-m8 dme-miR-277-3p X + 13807460 13807550 3'utr inaE FlyBase G46280.1 TGTCCATTTATTGTTTAAGTTGAACAGATGTAATTTGCATTTCGTTTTCAAAATCTCCGTGTTTAAATCACGCTCTCCAAATATCTCTTAT 11 13807494 0.984307269 9 11 90 1 1.204119983 0 0.272727273 0.5 11 0 0 16 X:13807460-13807550 7 5 4481 FBgn0261244 812.34 24.45 37.46 0.006155058 0.204498978 0.133475707 1 1 1 0.1 dme-miR-970-3p 6mer3-8 TCTTAT X 13807545 13807550 + X_13807545_13807550_+ 0.5603489 0.999394265 0.779871582 0.31045198 inaE FBtr0073826 13805478 13807627 X + 13807524 13807551 3'utr inaE FlyBase G61284.2 AAATCACGCTCTCCAAATATCTCTTATA 4 13807547 0.770351326 2 3 26 0.8 0.602059991 0 0.25 0.4 4 1 0 4 X:13807524-13807551 6 inaE FBtr0073826 13805478 13807627 TCTTAT 6mer3-8 dme-miR-970-3p X + 13807460 13807550 3'utr inaE FlyBase G46280.1 TGTCCATTTATTGTTTAAGTTGAACAGATGTAATTTGCATTTCGTTTTCAAAATCTCCGTGTTTAAATCACGCTCTCCAAATATCTCTTAT 11 13807547 0.984307269 9 11 90 1 1.204119983 0 0.272727273 0.5 11 0 0 16 X:13807460-13807550 6 3.5 4482 FBgn0261244 812.34 24.45 37.46 0.004308541 0.143149284 0.093432995 -2 -2 -2 0.1 dme-miR-8-3p 6mer2-7 AGTATT X 13813020 13813025 - X_13813020_13813025_- 0.748298521 0.765483026 0.756890773 0.012151276 Clic FBtr0073835 13812969 13813727 X - 13813005 13813052 3'utr Clic FlyBase G67337.1 AAAAGAAAATTAGAGGAGGAAATGAAGAGTATTTTTTGTATTTAAGTG 39 13813019 0.621321288 5 37 302 0.891304348 1.612783857 0.369565217 0.128205128 0.260869565 39 5 0 41 X:13813005-13813052 6 Clic FBtr0073835 13812969 13813727 AGTATT 6mer2-7 dme-miR-8-3p X - 13813004 13813045 3'utr Clic FlyBase G50696.1 AATTAGAGGAGGAAATGAAGAGTATTTTTTGTATTTAAGTGA 41 13813019 0.630970943 7 39 358 0.949152542 1.748188027 0.440677966 0.365853659 0.559322034 41 3 0 56 X:13813004-13813045 6 39.5 4483 FBgn0030529 12555.19667 953.18 1456.586667 0.003146108 0.041440232 0.027118194 -6 -6 -6 0.1 dme-miR-276a-3p 6mer2-7 GTTCCT X 13813259 13813264 - X_13813259_13813264_- 0.970469026 0.999999578 0.985234302 0.020881288 Clic FBtr0073835 13812969 13813727 X - 13813258 13813373 3'utr Clic FlyBase G67338.1 ATTAAAACATTTGTGTTTGACATACAGATGTCCACAGGCAAACGCATGAATATAATTACGTAGCTCGCTGTCAATTAAAATGTATCGATCGCCTGAAGGAGCGCTTCCCGTTCCTT 22 13813280 0.971556067 12 21 126 0.961538462 1.397940009 0.076923077 0.181818182 0.307692308 22 1 0 25 X:13813258-13813373 6 Clic FBtr0073835 13812969 13813727 GTTCCT 6mer2-7 dme-miR-276a-3p X - 13813256 13813317 3'utr Clic FlyBase G50697.1 TACGTAGCTCGCTGTCAATTAAAATGTATCGATCGCCTGAAGGAGCGCTTCCCGTTCCTTTA 9 13813281 0.96930151 6 7 57 0.722222222 1.113943352 0.111111111 0.666666667 0.833333333 9 5 0 13 X:13813256-13813317 6 2.5 4484 FBgn0030529 12555.19667 953.18 1456.586667 0.000199121 0.002622799 0.001716341 16 17 16.5 0.1 dme-miR-1012-3p 6mer3-8 TTGACT X 13813411 13813416 - X_13813411_13813416_- 0.821621728 0.827275222 0.824448475 0.003997628 Clic FBtr0073835 13812969 13813727 X - 13813391 13813444 3'utr Clic FlyBase G67339.1 ACACCAGCCACAATCTATCGAGAAGGCTTTGACTTACTTGGCCCGCCTGCATGT 32 13813407 0.960403298 7 30 198 0.95 1.579783597 0.3 0.1875 0.35 32 2 0 38 X:13813391-13813444 6 Clic FBtr0073835 13812969 13813727 TTGACT 6mer3-8 dme-miR-1012-3p X - 13813392 13813430 3'utr Clic FlyBase G50698.1 CTATCGAGAAGGCTTTGACTTACTTGGCCCGCCTGCATG 21 13813407 0.736937256 6 20 130 0.96 1.380211242 0.36 0.19047619 0.32 21 1 0 24 X:13813392-13813430 6 25.5 4485 FBgn0030529 12555.19667 953.18 1456.586667 0.002031032 0.026752555 0.017506682 -9 -9 -9 0.1 dme-miR-317-3p 6mer2-7 GTGTTC X 13813515 13813520 - X_13813515_13813520_- 0.97884934 0.999989655 0.989419498 0.01494852 Clic FBtr0073835|FBtr0346089 13812969|13813459 13813727|13813727 X - 13813483 13813537 3'utr Clic FlyBase G67340.1 AACAAGCATAACAACAAGTGTTCTTTAAGCAGCCGCGTTGCCTTTCTTCAGCTAT 16 13813513 0.666089203 7 16 104 1 1.278753601 0.052631579 0.1875 0.315789474 16 0 0 19 X:13813483-13813537 6 Clic FBtr0073835|FBtr0346089 13812969|13813459 13813727|13813727 GTGTTC 6mer2-7 dme-miR-317-3p X - 13813499 13813535 3'utr Clic FlyBase G50699.1 CAAGCATAACAACAAGTGTTCTTTAAGCAGCCGCGTT 6 13813514 0.968707713 3 6 37 1 1 0 0.5 0.7 6 0 0 10 X:13813499-13813535 6 9 4486 FBgn0030529 12555.19667 953.18 1456.586667 0.000716835 0.009442078 0.006178829 -7 -6 -6.5 0.1 dme-miR-34-5p 6mer3-8 CACTGC X 13830989 13830994 - X_13830989_13830994_- 0.916885458 0.999991218 0.958438338 0.058764604 AMPdeam FBtr0309245 13830739 13834641 X - 13830939 13831029 5'utr AMPdeam FlyBase G67368.1 TGTGCCAGAGATCCGTGTGGCCTATCGCTATGAGACACTGCTGGACGAGCTGTCCAACATCTTCAAGGTGAACCAGACGTGCTCCATTGCA 43 13830999 0.964693801 9 41 217 0.956521739 1.166331422 0.347826087 0.069767442 0.130434783 43 0 2 44 X:13830939-13831029 6 AMPdeam FBtr0309245 13830739 13834641 CACTGC 6mer3-8 dme-miR-34-5p X - 13830892 13831073 5'utr AMPdeam FlyBase G50720.2 TATTACGAGGACGGTATCATGGGCAACGACATCACGCGCACCAATGTGCCAGAGATCCGTGTGGCCTATCGCTATGAGACACTGCTGGACGAGCTGTCCAACATCTTCAAGGTGAACCAGACGTGCTCCATTGCAGACATGAACGCCACATAGTCTGGTCCATGCGGTACATCTGCTCCATC 53 13830999 0.982255174 20 47 249 0.966666667 1.638489257 0.244444444 0.452830189 0.677777778 53 2 1 87 X:13830892-13831073 6 29.5 4487 FBgn0052626 1047.716667 41.85666667 63.94666667 0.028156467 0.704786175 0.461321935 5 5 5 0.1 dme-miR-8-3p 6mer2-7 AGTATT X 13831402 13831407 - X_13831402_13831407_- 0.999999278 0.999995404 0.999997341 2.76E-06 AMPdeam FBtr0309245 13830739 13834641 X - 13831344 13831525 5'utr AMPdeam FlyBase G67370.1 CTGTTGCGCAAAGTGCCCGTGCTGCAGTATCTGTATTATCTGACCCAGATTGGCATCGCCATGTCGCCGCTGTCGAACAACTCCCTGTTCCTCAACTATCATCGCAATCCGCTGCCAGAGTATTTGGCCCGTGGCCTCATCATTTCCCTCTCCACGGATGATCCCTTGCAATTCCACTTCAC 103 13831418 0.855457579 23 98 665 0.960629921 1.785329835 0.173228346 0.184466019 0.338582677 103 4 1 122 X:13831344-13831525 6 AMPdeam FBtr0309245 13830739 13834641 AGTATT 6mer2-7 dme-miR-8-3p X - 13831386 13831521 5'utr AMPdeam FlyBase G50721.1 TGCGCAAAGTGCCCGTGCTGCAGTATCTGTATTATCTGACCCAGATTGGCATCGCCATGTCGCCGCTGTCGAACAACTCCCTGTTCCTCAACTATCATCGCAATCCGCTGCCAGAGTATTTGGCCCGTGGCCTCAT 53 13831418 0.86398262 14 46 322 0.886075949 1.84509804 0.215189873 0.377358491 0.582278481 53 9 0 70 X:13831386-13831521 6 34.5 4488 FBgn0052626 1047.716667 41.85666667 63.94666667 0.03292875 0.824241459 0.539512093 11 11 11 0.1 dme-miR-8-3p 6mer3-8 CAGTAT X 13831496 13831501 - X_13831496_13831501_- 0.84691936 0.997153932 0.922036646 0.106231834 AMPdeam FBtr0309245 13830739 13834641 X - 13831344 13831525 5'utr AMPdeam FlyBase G67370.1 CTGTTGCGCAAAGTGCCCGTGCTGCAGTATCTGTATTATCTGACCCAGATTGGCATCGCCATGTCGCCGCTGTCGAACAACTCCCTGTTCCTCAACTATCATCGCAATCCGCTGCCAGAGTATTTGGCCCGTGGCCTCATCATTTCCCTCTCCACGGATGATCCCTTGCAATTCCACTTCAC 103 13831496 0.855457579 23 98 665 0.960629921 1.785329835 0.173228346 0.184466019 0.338582677 103 4 1 122 X:13831344-13831525 6 AMPdeam FBtr0309245 13830739 13834641 CAGTAT 6mer3-8 dme-miR-8-3p X - 13831386 13831521 5'utr AMPdeam FlyBase G50721.1 TGCGCAAAGTGCCCGTGCTGCAGTATCTGTATTATCTGACCCAGATTGGCATCGCCATGTCGCCGCTGTCGAACAACTCCCTGTTCCTCAACTATCATCGCAATCCGCTGCCAGAGTATTTGGCCCGTGGCCTCAT 53 13831496 0.86398262 14 46 322 0.886075949 1.84509804 0.215189873 0.377358491 0.582278481 53 9 0 70 X:13831386-13831521 6 22.5 4489 FBgn0052626 1047.716667 41.85666667 63.94666667 0.021475272 0.537548778 0.351855713 -5 -5 -5 0.1 dme-miR-190-5p 6mer3-8 ACATAT X 13831934 13831939 - X_13831934_13831939_- 0.992316701 0.999999509 0.996158105 0.00543256 AMPdeam FBtr0309245 13830739 13834641 X - 13831882 13832033 5'utr AMPdeam FlyBase G67374.1 AGCTCGAACATTCGCTGGCTGATCCAGATACCCCGTCTCTTCGACATCTTCAAGTCGAACAAGATGATGAAGTCATTCCAGGAGATCTTGAACAACATATTCCTGCCGCTCTTCGAGGCGACAGCCCGACCCAGTAAGCATCCCGAGTTGCA 67 13831934 0.921287659 18 66 386 0.988235294 1.924279286 0.211764706 0.208955224 0.376470588 67 1 0 84 X:13831882-13832033 6 AMPdeam FBtr0309245 13830739 13834641 ACATAT 6mer3-8 dme-miR-190-5p X - 13831842 13831971 5'utr AMPdeam FlyBase G50724.1 GATGATGAAGTCATTCCAGGAGATCTTGAACAACATATTCCTGCCGCTCTTCGAGGCGACAGCCCGACCCAGTAAGCATCCCGAGTTGCATCGCTTTCTGCAGTACGTGATCGGATTCGATTCGGTGGAC 52 13831934 0.971567735 14 48 283 0.950617284 1.58546073 0.333333333 0.403846154 0.617283951 52 3 1 77 X:13831842-13831971 6 31.5 4490 FBgn0052626 1047.716667 41.85666667 63.94666667 0.03006538 0.752568289 0.492597998 -5 -5 -5 0.1 dme-miR-305-5p 8mer-m1 AGTACAAT X 13832301 13832308 - X_13832301_13832308_- 0.570362648 0.570363041 0.570362844 2.83E-07 AMPdeam FBtr0309245 13830739 13834641 X - 13832279 13832366 5'utr AMPdeam FlyBase G67376.1 ATGTTGGACGTCCATGCCGATCGCAACACGTTCCATCGCTTCGACAAGTTTAACTCCAAGTACAATCCCATCGGGGAGTCGCGGCTCA 17 13832302 0.847476229 7 13 83 0.789473684 0.698970004 0.157894737 0.058823529 0.157894737 17 2 2 15 X:13832279-13832366 8 AMPdeam FBtr0309245 13830739 13834641 AGTACAAT 8mer-m1 dme-miR-305-5p X - 13832224 13832320 5'utr AMPdeam FlyBase G50726.1 AGTTTAACTCCAAGTACAATCCCATCGGGGAGTCGCGGCTCAGGGAAGTCTTCCTGAAGACGGACAACTATCTGAATGGCAAATACTTTGCACAGAT 12 13832297 0.957759835 9 12 60 1 1.278753601 0 0.416666667 0.631578947 12 0 0 19 X:13832224-13832320 8 7.5 4491 FBgn0052626 1047.716667 41.85666667 63.94666667 0.007158424 0.179182926 0.117285238 -6 -11 -8.5 0.1 dme-miR-1008-3p 7mer-m8 AGCTGTG X 13851202 13851208 - X_13851202_13851208_- 0.61038096 0.660034707 0.635207834 0.035110468 mamo FBtr0346001|FBtr0346002 13846114|13850846 13854098|13854098 X - 13851188 13851222 3'utr mamo FlyBase G67389.1 AACAACAAGCTGTGAGCTGTGTATGTGAATGAATT 7 13851195 0.818136081 6 7 43 1 0.903089987 0.375 0.142857143 0.25 7 0 0 8 X:13851188-13851222 7 mamo FBtr0346001|FBtr0346002 13846114|13850846 13854098|13854098 AGCTGTG 7mer-m8 dme-miR-1008-3p X - 13851189 13851231 3'utr mamo FlyBase G50738.1 AACAACAACAACAACAAGCTGTGAGCTGTGTATGTGAATGAAT 5 13851205 0.958484462 3 5 27 1 0.77815125 0 0.2 0.333333333 5 0 0 6 X:13851189-13851231 7 6 4492 FBgn0267033 6198.503333 82.32 126.9666667 0.000967976 0.072886297 0.047256498 -13 -3 -8 0.1 dme-miR-305-5p 7mer-A1 GTACAAA X 13853450 13853456 - X_13853450_13853456_- 0.782911824 0.782911402 0.782911613 2.83E-07 mamo FBtr0346001|FBtr0346002 13846114|13850846 13854098|13854098 X - 13853443 13853493 3'utr mamo FlyBase G67397.1 TTTACACCGATCTATAGAAGCTAACTAGCAACAATTTGTACAAAACAAACA 17 13853458 0.879365182 4 17 80 1 1.255272505 0.055555556 0.058823529 0.111111111 17 0 0 18 X:13853443-13853493 7 mamo FBtr0346001|FBtr0346002 13846114|13850846 13854098|13854098 GTACAAA 7mer-A1 dme-miR-305-5p X - 13853444 13853491 3'utr mamo FlyBase G50744.1 TACACCGATCTATAGAAGCTAACTAGCAACAATTTGTACAAAACAAAC 10 13853458 0.937335942 4 10 43 1 1.176091259 0 0.3 0.533333333 10 0 0 15 X:13853444-13853491 7 8.5 4493 FBgn0267033 6198.503333 82.32 126.9666667 0.001371299 0.103255588 0.066946705 2 2 2 0.1 dme-miR-282-5p 6mer2-7 GAGGCT X 13860274 13860279 - X_13860274_13860279_- 0.999937725 0.994782879 0.997360302 0.003644994 mamo FBtr0346003 13858015 13869553 X - 13860241 13860291 3'utr mamo FlyBase G67402.1 AAGTTCCCTATTGAGGCTCATTCATAAATAATTTTACGAATAATTTTTAAC 7 13860280 0.979979007 3 7 54 1 0.903089987 0 0.142857143 0.25 7 0 0 8 X:13860241-13860291 6 mamo FBtr0346003 13858015 13869553 GAGGCT 6mer2-7 dme-miR-282-5p X - 13860269 13860295 3'utr mamo FlyBase G50746.1 TTGTAAGTTCCCTATTGAGGCTCATTC 5 13860281 0.711883834 3 5 39 1 1.079181246 0 1 1 5 0 0 12 X:13860269-13860295 6 5.5 4494 FBgn0267033 6198.503333 82.32 126.9666667 0.000887311 0.066812439 0.043318456 1 2 1.5 0.1 dme-miR-1008-3p 7mer-A1 GCTGTGA X 13866926 13866932 - X_13866926_13866932_- 0.821521206 0.821178271 0.821349739 0.000242467 mamo FBtr0346003|FBtr0346006 13858015|13865860 13869553|13869553 X - 13866900 13866957 5'utr mamo FlyBase G67404.1 AAAAACTTTTGGATTAAACAATTTGGCTGTGATAGCATTACAAGAATAGTAAATAATT 71 13866934 0.985963621 9 68 568 0.964285714 1.908485019 0.071428571 0.154929577 0.285714286 71 3 0 81 X:13866900-13866957 7 mamo FBtr0346003|FBtr0346006 13858015|13865860 13869553|13869553 GCTGTGA 7mer-A1 dme-miR-1008-3p X - 13866900 13866949 5'utr mamo FlyBase G50747.1 TTGGATTAAACAATTTGGCTGTGATAGCATTACAAGAATAGTAAATAATT 38 13866934 0.869907644 8 35 255 0.9 1.176091259 0.18 0.263157895 0.44 38 3 2 45 X:13866900-13866949 7 53 4495 FBgn0267033 6198.503333 82.32 126.9666667 0.008550451 0.64382896 0.417432397 2 2 2 0.1 dme-bantam-3p 7mer-A1 GATCTCA X 13867332 13867338 - X_13867332_13867338_- 0.823237844 0.823130801 0.823184322 7.57E-05 mamo FBtr0346003|FBtr0346006 13858015|13865860 13869553|13869553 X - 13867313 13867352 5'utr mamo FlyBase G67405.1 AAGAAATGCAAATCGATCTCAAAATTATAAACAAATGAAA 47 13867340 0.841370012 4 46 221 0.964285714 1.73239376 0.142857143 0.14893617 0.285714286 47 2 0 54 X:13867313-13867352 7 mamo FBtr0346003|FBtr0346006 13858015|13865860 13869553|13869553 GATCTCA 7mer-A1 dme-bantam-3p X - 13867320 13867393 5'utr mamo FlyBase G50748.1 ACTTAGGTGATTAGCCCGGCAACAACAGCAAACGAAACAACAAGAAATGCAAATCGATCTCAAAATTATAAACA 22 13867345 0.961314377 4 22 109 1 1.491361694 0.161290323 0.272727273 0.483870968 22 0 0 31 X:13867320-13867393 7 33.5 4496 FBgn0267033 6198.503333 82.32 126.9666667 0.00540453 0.406948494 0.263848779 2 7 4.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-m8 CTGTGAT X 13867828 13867834 - X_13867828_13867834_- 0.644928626 0.572102202 0.608515414 0.051496041 mamo FBtr0346003|FBtr0346003|FBtr0346003|FBtr0346006|FBtr0346006|FBtr0346006 13858015|13858015|13858015|13865860|13865860|13865860 13869553|13869553|13869553|13869553|13869553|13869553 X - 13867806 13867864 5'utr mamo FlyBase G67406.1 AAGCAGCAGCAGCAGAATTACATAGAATATCTGTGATCTTAACGATATTTATAAAAAAC 126 13867835 0.987236358 7 118 1070 0.937062937 2.127104798 0.111888112 0.119047619 0.223776224 126 9 0 134 X:13867806-13867864 7 mamo FBtr0346003|FBtr0346003|FBtr0346003|FBtr0346006|FBtr0346006|FBtr0346006 13858015|13858015|13858015|13865860|13865860|13865860 13869553|13869553|13869553|13869553|13869553|13869553 CTGTGAT 7mer-m8 "dme-miR-2a-3p,dme-miR-2b-3p" X - 13867808 13867858 5'utr mamo FlyBase G50749.1 CAGCAGCAGAATTACATAGAATATCTGTGATCTTAACGATATTTATAAAAA 88 13867835 0.738477231 5 84 749 0.971223022 1.829303773 0.115107914 0.420454545 0.633093525 88 3 1 135 X:13867808-13867858 7 105.5 4497 FBgn0267033 6198.503333 82.32 126.9666667 0.017020238 1.281584062 0.830926752 1 1 1 0.1 dme-miR-1006-3p 6mer3-8 CGAATT X 13868995 13869000 - X_13868995_13869000_- 0.502325052 0.505395207 0.50386013 0.002170889 mamo FBtr0346003|FBtr0346006 13858015|13865860 13869553|13869553 X - 13868980 13869021 5'utr mamo FlyBase G67409.1 AATTATATAGCAGCATATTGTCGAATTGTTGAAGTTTATACC 5 13869004 0.664792619 3 5 48 1 0.698970004 0 0 0 5 0 0 5 X:13868980-13869021 6 mamo FBtr0346003|FBtr0346006 13858015|13865860 13869553|13869553 CGAATT 6mer3-8 dme-miR-1006-3p X - 13868986 13869015 5'utr mamo FlyBase G50753.1 ATAGCAGCATATTGTCGAATTGTTGAAGTT 6 13869004 0.71266717 2 5 36 0.666666667 0.77815125 0 0.333333333 0.555555556 6 3 0 6 X:13868986-13869015 6 5.5 4498 FBgn0267033 6198.503333 82.32 126.9666667 0.000887311 0.066812439 0.043318456 4 4 4 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA X 1392563 1392570 + X_1392563_1392570_+ 0.500118259 0.500119652 0.500118956 9.90E-07 CG32813 FBtr0330319|FBtr0070222|FBtr0342737|FBtr0342736|FBtr0070219|FBtr0330317|FBtr0330320|FBtr0342735 1391564|1391564|1391564|1391564|1391564|1391564|1391564|1391564 1392843|1392843|1392843|1392843|1392843|1392843|1392843|1392843 X + 1392537 1392581 3'utr CG32813 FlyBase G57945.1 CATTGAAGGAACTGTAGCTAATTTATGTACTTAATGAACCAGTGA 26 1392562 0.752432733 2 26 255 1 1.462397998 0.172413793 0.115384615 0.206896552 26 0 0 29 X:1392537-1392581 8 CG32813 FBtr0342737|FBtr0330319|FBtr0342736|FBtr0330320|FBtr0070222|FBtr0330317|FBtr0070219|FBtr0342735 1391564|1391564|1391564|1391564|1391564|1391564|1391564|1391564 1392843|1392843|1392843|1392843|1392843|1392843|1392843|1392843 GTACTTAA 8mer-A1 dme-miR-252-5p X + 1392540 1392583 3'utr CG32813 FlyBase G43842.1 TGAAGGAACTGTAGCTAATTTATGTACTTAATGAACCAGTGAAA 22 1392562 0.72588109 3 22 203 1 1.568201724 0.108108108 0.363636364 0.621621622 22 0 0 37 X:1392540-1392583 8 24 4499 FBgn0052813 73.22 2.636666667 4.1 0.327779295 9.102402023 5.853658537 1 1 1 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC X 1392625 1392630 + X_1392625_1392630_+ 0.999996057 0.999996286 0.999996171 1.41E-07 CG32813 FBtr0330319|FBtr0070222|FBtr0342737|FBtr0342736|FBtr0070219|FBtr0330317|FBtr0330320|FBtr0342735 1391564|1391564|1391564|1391564|1391564|1391564|1391564|1391564 1392843|1392843|1392843|1392843|1392843|1392843|1392843|1392843 X + 1392604 1392667 3'utr CG32813 FlyBase G57946.1 GGTGTAAAGAGAAGAAACTTGCTAGTCGCCGCTGCATAACTGTGTAAATGTGGCACACAAACCA 22 1392623 0.946083067 3 21 90 0.962962963 1.414973348 0.444444444 0.227272727 0.37037037 22 1 0 26 X:1392604-1392667 6 CG32813 FBtr0342737|FBtr0330319|FBtr0342736|FBtr0330320|FBtr0070222|FBtr0330317|FBtr0070219|FBtr0342735 1391564|1391564|1391564|1391564|1391564|1391564|1391564|1391564 1392843|1392843|1392843|1392843|1392843|1392843|1392843|1392843 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" X + 1392603 1392640 3'utr CG32813 FlyBase G43843.1 TGGTGTAAAGAGAAGAAACTTGCTAGTCGCCGCTGCAT 11 1392623 0.937397908 2 11 45 1 1.176091259 0.6 0.181818182 0.4 11 0 0 15 X:1392603-1392640 6 16 4500 FBgn0052813 73.22 2.636666667 4.1 0.21851953 6.068268015 3.902439024 2 2 2 0.1 dme-miR-34-5p 7mer-m8 CACTGCC X 1395468 1395474 + X_1395468_1395474_+ 0.708953228 0.708953373 0.708953301 1.41E-07 CG11448 FBtr0332291|FBtr0070225 1395374|1395374 1397337|1397337 X + 1395397 1395496 3'utr CG11448 FlyBase G57951.1 TTGGCGTGCATTTCACTTTTCGTTTGTTTTCTGTTTTTCCGTTTCCGTTCCATTCCGTTCCGTTCCGTTTGCACTGCCCCCCGCACCCCTGCATCTTGCA 192 1395450 0.99058932 17 185 1899 0.948497854 1.566241023 0.201716738 0.1875 0.330472103 192 7 5 221 X:1395397-1395496 7 CG11448 FBtr0070225|FBtr0332291 1395374|1395374 1397337|1397337 CACTGCC 7mer-m8 dme-miR-34-5p X + 1395394 1395494 3'utr CG11448 FlyBase G43848.1 GAGTTGGCGTGCATTTCACTTTTCGTTTGTTTTCTGTTTTTCCGTTTCCGTTCCATTCCGTTCCGTTCCGTTTGCACTGCCCCCCGCACCCCTGCATCTTG 142 1395450 0.990163311 15 133 1333 0.936651584 1.713910354 0.199095023 0.401408451 0.615384615 142 11 3 207 X:1395394-1395494 7 46 4501 FBgn0024985 122.6666667 3.986666667 6.07 0.375 11.53846154 7.578253707 18 18 18 0.1 dme-miR-305-3p 6mer2-7 TGTGCC X 1395641 1395646 + X_1395641_1395646_+ 0.694119645 0.692103405 0.693111525 0.001425669 CG11448 FBtr0332291|FBtr0070225 1395374|1395374 1397337|1397337 X + 1395526 1395665 3'utr CG11448 FlyBase G57952.1 ACGTCTTACGATTACGTTTACATTTAGTTTAGGCAACAGCCTGTATCTGACCCTGTCCCTCGCCATTCACCTGCTCCGCCTGAGCTGTACATACATAGTTTACACACTCGATTGCTGTGCCCTCATAATTCTAAGTTGTT 1174 1395637 0.923214846 21 1166 9428 0.993621545 2.845718018 0.029057406 0.160988075 0.301913536 1174 8 1 1402 X:1395526-1395665 6 CG11448 FBtr0070225|FBtr0332291 1395374|1395374 1397337|1397337 TGTGCC 6mer2-7 dme-miR-305-3p X + 1395526 1395664 3'utr CG11448 FlyBase G43849.1 ACGTCTTACGATTACGTTTACATTTAGTTTAGGCAACAGCCTGTATCTGACCCTGTCCCTCGCCATTCACCTGCTCCGCCTGAGCTGTACATACATAGTTTACACACTCGATTGCTGTGCCCTCATAATTCTAAGTTGT 807 1395637 0.90858251 22 799 6322 0.990909091 2.514547753 0.028030303 0.416356877 0.643181818 807 9 3 1308 X:1395526-1395664 6 945 4502 FBgn0024985 122.6666667 3.986666667 6.07 7.703804348 237.0401338 155.6836903 4 4 4 0.1 dme-miR-986-5p 6mer2-7 TTCGAG X 1396553 1396558 + X_1396553_1396558_+ 0.995637478 0.995752194 0.995694836 8.11E-05 CG11448 FBtr0332292|FBtr0332291|FBtr0070225 1395684|1395374|1395374 1397337|1397337|1397337 X + 1396529 1396594 3'utr CG11448 FlyBase G57958.1 CCACTCCACTTGAAGCCCAGTGATTTCGAGGAGATCTCAGTCCGATCCTCGTTCATAGCTAGTATC 47 1396553 0.692836088 6 45 251 0.982142857 1.439332694 0.160714286 0.14893617 0.285714286 47 0 1 55 X:1396529-1396594 6 CG11448 FBtr0070225|FBtr0332291|FBtr0332292 1395374|1395374|1395684 1397337|1397337|1397337 TTCGAG 6mer2-7 dme-miR-986-5p X + 1396536 1396580 3'utr CG11448 FlyBase G43852.1 ACTTGAAGCCCAGTGATTTCGAGGAGATCTCAGTCCGATCCTCGT 36 1396552 0.68024546 6 36 195 1 1.707570176 0.058823529 0.25 0.470588235 36 0 0 51 X:1396536-1396580 6 39 4503 FBgn0024985 122.6666667 3.986666667 6.07 0.317934783 9.782608696 6.425041186 0 1 0.5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 1396725 1396731 + X_1396725_1396731_+ 0.667491297 0.75508103 0.711286163 0.061935271 CG11448 FBtr0332292|FBtr0332291|FBtr0070225 1395684|1395374|1395374 1397337|1397337|1397337 X + 1396668 1396743 3'utr CG11448 FlyBase G57959.1 AAAGCGAGGAAACTCCGTTTACATATCAGCTCCATCGCTATCGTCGATGCGAACGTGCCAAAGACTAATGGTCAGA 13 1396723 0.9652599 5 12 66 1 1.113943352 0 0 0 13 0 0 13 X:1396668-1396743 7 CG11448 FBtr0070225|FBtr0332291|FBtr0332292 1395374|1395374|1395684 1397337|1397337|1397337 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X + 1396678 1396746 3'utr CG11448 FlyBase G43853.1 AACTCCGTTTACATATCAGCTCCATCGCTATCGTCGATGCGAACGTGCCAAAGACTAATGGTCAGACCC 11 1396723 0.940431637 4 10 45 0.933333333 0.84509804 0.2 0.272727273 0.466666667 11 0 1 14 X:1396678-1396746 7 7.5 4504 FBgn0024985 122.6666667 3.986666667 6.07 0.061141304 1.881270903 1.235584843 2 2 2 0.1 dme-miR-980-5p 6mer3-8 GAAAAA X 1396917 1396922 + X_1396917_1396922_+ 0.618263777 0.986749404 0.80250659 0.260558667 CG11448 FBtr0332292|FBtr0332291|FBtr0070225 1395684|1395374|1395374 1397337|1397337|1397337 X + 1396893 1396945 3'utr CG11448 FlyBase G57960.1 ACGAGCGCGCAATGGCATCGATATGAAAAAGTGGACTAACGTTGAGTGGGTGA 17 1396924 0.956320303 3 15 83 0.894736842 1.230448921 0.263157895 0.117647059 0.210526316 17 2 0 17 X:1396893-1396945 6 CG11448 FBtr0070225|FBtr0332291|FBtr0332292 1395374|1395374|1395684 1397337|1397337|1397337 GAAAAA 6mer3-8 dme-miR-980-5p X + 1396878 1396944 3'utr CG11448 FlyBase G43854.1 TTTATAAAATTGAACACGAGCGCGCAATGGCATCGATATGAAAAAGTGGACTAACGTTGAGTGGGTG 13 1396924 0.935558189 5 13 49 1 1.301029996 0.15 0.461538462 0.65 13 0 0 20 X:1396878-1396944 6 11 4505 FBgn0024985 122.6666667 3.986666667 6.07 0.089673913 2.759197324 1.812191104 -7 -7 -7 0.1 dme-miR-8-3p 6mer2-7 AGTATT X 1396976 1396981 + X_1396976_1396981_+ 0.99995696 0.997730909 0.998843935 0.00157409 CG11448 FBtr0332292|FBtr0332291|FBtr0070225 1395684|1395374|1395374 1397337|1397337|1397337 X + 1396953 1397059 3'utr CG11448 FlyBase G57961.1 GAAAAGAAGATGGAGAGAAATTGAGTATTTGGTGAATTAATGTTAACTAAATTTATATACACATATACACATGCATTATACATAATATACTTTACTATATACTATGT 41 1396974 0.982932592 17 40 307 0.98 1.69019608 0.18 0.170731707 0.32 41 1 0 49 X:1396953-1397059 6 CG11448 FBtr0070225|FBtr0332291|FBtr0332292 1395374|1395374|1395684 1397337|1397337|1397337 AGTATT 6mer2-7 dme-miR-8-3p X + 1396956 1397012 3'utr CG11448 FlyBase G43855.1 AAGAAGATGGAGAGAAATTGAGTATTTGGTGAATTAATGTTAACTAAATTTATATAC 31 1396974 0.7763504 10 28 264 0.905660377 1.681241237 0.113207547 0.548387097 0.735849057 31 5 0 48 X:1396956-1397012 6 29.5 4506 FBgn0024985 122.6666667 3.986666667 6.07 0.24048913 7.399665552 4.859967051 2 2 2 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 13999271 13999276 + X_13999271_13999276_+ 0.730949445 0.730949445 0.730949445 0 ben FBtr0307296|FBtr0307296|FBtr0307296|FBtr0332844|FBtr0332844|FBtr0332844|FBtr0073855|FBtr0073855|FBtr0073855|FBtr0332843|FBtr0332843|FBtr0332843 13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615 13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805 X + 13999254 13999295 3'utr ben FlyBase G61311.1 TTTCAGAAAATTTAAGATGTGATCGTCCAACTTGTAGACTTT 10 13999266 0.888634882 5 8 77 0.916666667 1.041392685 0 0.2 0.333333333 10 1 0 11 X:13999254-13999295 6 ben FBtr0332843|FBtr0332843|FBtr0332843|FBtr0332844|FBtr0332844|FBtr0332844|FBtr0073855|FBtr0073855|FBtr0073855|FBtr0307296|FBtr0307296|FBtr0307296 13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615 13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X + 13999257 13999298 3'utr ben FlyBase G46304.1 CAGAAAATTTAAGATGTGATCGTCCAACTTGTAGACTTTACT 9 13999267 0.850713566 5 9 61 1 1.230448921 0.176470588 0.666666667 0.823529412 9 0 0 17 X:13999257-13999298 6 8.5 4507 FBgn0000173 1034.81 74.77333333 113.92 0.008214068 0.11367689 0.074613764 5 4 4.5 0.1 dme-miR-14-3p 6mer3-8 AAGACT X 14204745 14204750 - X_14204745_14204750_- 0.986617976 0.822237861 0.904427919 0.116234283 l(1)G0469 FBtr0333428|FBtr0333429 14203959|14203959 14205285|14206316 X - 14204705 14204776 3'utr l(1)G0469 FlyBase G67423.1 CACACACACACACTGTGAAATTCGAAAAGACTTATTAAATATTTGTTTGTTTTTTTTTTTTCGTCCTAACTT 15 14204742 0.985111958 5 13 115 0.833333333 0.698970004 0.222222222 0.2 0.333333333 15 1 2 15 X:14204705-14204776 6 l(1)G0469 FBtr0333429|FBtr0333428 14203959|14203959 14206316|14205285 AAGACT 6mer3-8 dme-miR-14-3p X - 14204735 14204773 3'utr l(1)G0469 FlyBase G50762.1 ACACACACACTGTGAAATTCGAAAAGACTTATTAAATAT 13 14204742 0.767437366 3 12 61 0.923076923 1.079181246 0.615384615 0 0 13 1 0 12 X:14204735-14204773 6 11.5 4508 FBgn0040153 149.5566667 5.536666667 8.426666667 0.076893931 2.077062011 1.36471519 -8 -8 -8 0.1 dme-miR-1006-3p 7mer-A1 GAATTTA X 14232321 14232327 - X_14232321_14232327_- 0.745620828 0.820924539 0.783272684 0.053247757 CG42271 FBtr0299614 14232280 14232720 X - 14232315 14232386 3'utr CG42271 FlyBase G67433.1 TGTAAACTTATGTGTAATCCCATCGGGAGCTGGTGTTGCATTGCGTTCCATGTGATTATGAATTTATTCTTG 8 14232330 0.99184049 5 7 72 0.888888889 0.903089987 0.333333333 0.125 0.222222222 8 1 0 8 X:14232315-14232386 7 CG42271 FBtr0299614 14232280 14232720 GAATTTA 7mer-A1 dme-miR-1006-3p X - 14232311 14232356 3'utr CG42271 FlyBase G50767.1 TGGTGTTGCATTGCGTTCCATGTGATTATGAATTTATTCTTGGAAT 6 14232328 0.983788489 4 5 41 0.9 0.954242509 0.4 0.5 0.7 6 1 0 9 X:14232311-14232356 7 3 4509 FBgn0259166 258.3166667 15.79666667 24.03666667 0.011613652 0.189913484 0.124809319 3 1 2 0.1 dme-miR-1012-3p 6mer3-8 TTGACT X 14258453 14258458 + X_14258453_14258458_+ 0.999999995 1 0.999999998 0 mud FBtr0332622|FBtr0308325|FBtr0308329|FBtr0308327|FBtr0308328 14258229|14258229|14258383|14258229|14256264 14258595|14258595|14258595|14258595|14258595 X + 14258367 14258474 stop_codon mud FlyBase G61371.1 ATGTTCAAGCGCAAGTAGGCGTGGTCGCAGTCGCAGTATTATACATATATTCCCCCATTCGTGTACATCAATCGGAACTTGAATTCTTGACTTATTATTTATGTAACC 48 14258453 0.985231866 14 47 391 0.980769231 1.707570176 0.057692308 0.083333333 0.153846154 48 1 0 51 X:14258367-14258474 6 mud FBtr0308327|FBtr0308325|FBtr0308329|FBtr0308328|FBtr0332622 14258229|14258229|14258383|14256264|14258229 14258595|14258595|14258595|14258595|14258595 TTGACT 6mer3-8 dme-miR-1012-3p X + 14258374 14258474 stop_codon mud FlyBase G46345.1 AGCGCAAGTAGGCGTGGTCGCAGTCGCAGTATTATACATATATTCCCCCATTCGTGTACATCAATCGGAACTTGAATTCTTGACTTATTATTTATGTAACC 36 14258453 0.86437693 11 32 294 0.919354839 1.45484486 0.032258065 0.472222222 0.693548387 36 4 1 57 X:14258374-14258474 6 20 4510 FBgn0002873 2508.803333 43.92333333 67.46333333 0.007971928 0.455338848 0.296457335 0 0 0 0.1 dme-miR-33-5p 7mer-A1 AATGCAA X 14258564 14258570 + X_14258564_14258570_+ 0.782908673 0.782896896 0.782902784 8.34E-06 mud FBtr0332622|FBtr0308325|FBtr0308329|FBtr0308327|FBtr0308328 14258229|14258229|14258383|14258229|14256264 14258595|14258595|14258595|14258595|14258595 X + 14258486 14258576 3'utr mud FlyBase G61372.1 TTTTGTACATCAGGACTTAGAGAGTTTAGTTTAAGTATGCATATGTTGCAGTGGTACAATATCGTGGGCGAACATAATAATGCAAATAAAA 13 14258563 0.963740803 7 12 66 0.923076923 1.079181246 0.230769231 0 0 13 1 0 12 X:14258486-14258576 7 mud FBtr0308327|FBtr0308325|FBtr0308329|FBtr0308328|FBtr0332622 14258229|14258229|14258383|14256264|14258229 14258595|14258595|14258595|14258595|14258595 AATGCAA 7mer-A1 dme-miR-33-5p X + 14258531 14258582 3'utr mud FlyBase G46346.2 TTGCAGTGGTACAATATCGTGGGCGAACATAATAATGCAAATAAAATTGTCT 10 14258563 0.970490291 5 9 43 0.823529412 1.146128036 0.176470588 0.5 0.705882353 10 3 0 14 X:14258531-14258582 7 8 4511 FBgn0002873 2508.803333 43.92333333 67.46333333 0.003188771 0.182135539 0.118582934 1 1 1 0.1 dme-miR-184-3p 8mer-A1 TCCGTCCA X 1455334 1455341 - X_1455334_1455341_- 0.41032647 0.425574443 0.417950456 0.010781893 CG14785 FBtr0070231 1455213 1455406 X - 1455313 1455369 3'utr CG14785 FlyBase G64003.1 ACTTCTGGGCAGTCGTGATTCTGTCAGTTCCGTCCATTGTCCTTTGCCGTGTCCATG 71 1455342 0.842382144 6 69 661 0.978947368 1.968482949 0.136842105 0.211267606 0.410526316 71 2 0 93 X:1455313-1455369 8 CG14785 FBtr0070231 1455213 1455406 TCCGTCCA 8mer-A1 dme-miR-184-3p X - 1455322 1455365 3'utr CG14785 FlyBase G48245.1 CTGGGCAGTCGTGATTCTGTCAGTTCCGTCCATTGTCCTTTGCC 34 1455342 0.818402752 4 33 305 0.958333333 1.662757832 0.1875 0.352941176 0.541666667 34 2 0 46 X:1455322-1455365 8 51 4512 FBgn0027795 22.33333333 1.63 2.503333333 2.28358209 31.28834356 20.37283622 1 1 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 1464404 1464409 - X_1464404_1464409_- 0.999993782 0.985856814 0.992925298 0.009996369 O-fut2 FBtr0070296 1464361 1464506 X - 1464384 1464433 3'utr O-fut2 FlyBase G64021.1 ATTCCGAACCACCTGCGATTGTGTACCAAAAATAAATCTAAAGCCAACAG 22 1464414 0.912667367 5 22 106 1 1.477121255 0.266666667 0.318181818 0.5 22 0 0 30 X:1464384-1464433 6 O-fut2 FBtr0070296 1464361 1464506 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X - 1464397 1464437 3'utr O-fut2 FlyBase G48258.1 CGGGATTCCGAACCACCTGCGATTGTGTACCAAAAATAAAT 9 1464414 0.932642957 4 9 37 1 1.079181246 0.333333333 0.222222222 0.416666667 9 0 0 12 X:1464397-1464437 6 13.5 4513 FBgn0027791 205.6766667 15.41 23.50333333 0.065637003 0.87605451 0.574386612 5 5 5 0.1 dme-miR-282-5p 7mer-m8 AGAGGCT X 1478389 1478395 + X_1478389_1478395_+ 0.426733933 0.6141905 0.520462216 0.132551833 mei-38 FBtr0070258|FBtr0339588 1478255|1478255 1478482|1478482 X + 1478323 1478409 3'utr mei-38 FlyBase G57976.1 TGTGATGTGTGCTGCTGGTTTAGGTGGTTTCTTAGCAACTGACCGTGTGTTTAGTCATTAACTTGAAGAGGCTTAGTTGTTCCTACA 21 1478397 0.704970433 11 21 175 1 1.447158031 0.178571429 0.285714286 0.464285714 21 0 0 28 X:1478323-1478409 7 mei-38 FBtr0070258|FBtr0339588 1478255|1478255 1478482|1478482 AGAGGCT 7mer-m8 dme-miR-282-5p X + 1478328 1478405 3'utr mei-38 FlyBase G43863.1 TGTGTGCTGCTGGTTTAGGTGGTTTCTTAGCAACTGACCGTGTGTTTAGTCATTAACTTGAAGAGGCTTAGTTGTTCC 13 1478396 0.9491711 7 11 100 0.888888889 1.204119983 0.333333333 0.307692308 0.5 13 2 0 16 X:1478328-1478405 7 10.5 4514 FBgn0260986 265.3966667 24.39333333 37.29666667 0.039563421 0.430445477 0.281526499 -8 -7 -7.5 0.1 dme-bantam-3p 6mer3-8 TGATCT X 14788749 14788754 - X_14788749_14788754_- 0.999996998 0.999995909 0.999996453 7.78E-07 rut FBtr0340467|FBtr0333656|FBtr0333655|FBtr0333654|FBtr0305581|FBtr0073992|FBtr0333657 14787476|14787476|14787476|14787476|14787476|14787476|14787476 14789669|14790548|14789669|14789669|14789669|14789669|14790548 X - 14788742 14788780 3'utr rut FlyBase G67465.1 CGCCCGTGCCCCACGCCAAGCGTCTTTGATCTTAAATGT 5 14788754 0.975080645 2 4 30 1 0.698970004 0.2 0 0 5 0 0 5 X:14788742-14788780 6 rut FBtr0073992|FBtr0333657|FBtr0333654|FBtr0305581|FBtr0333655|FBtr0340467|FBtr0333656 14787476|14787476|14787476|14787476|14787476|14787476|14787476 14789669|14790548|14789669|14789669|14789669|14789669|14790548 TGATCT 6mer3-8 dme-bantam-3p X - 14788739 14788767 3'utr rut FlyBase G50788.1 CGCCAAGCGTCTTTGATCTTAAATGTATG 8 14788754 0.695109832 2 8 61 1 1 0.1 0.25 0.4 8 0 0 10 X:14788739-14788767 6 6 4515 FBgn0003301 229.9033333 3.326666667 5.11 0.026097925 1.803607214 1.174168297 0 0 0 0.1 dme-miR-14-3p 6mer2-7 AGACTG X 14788934 14788939 - X_14788934_14788939_- 0.999993934 0.999999778 0.999996856 4.17E-06 rut FBtr0340467|FBtr0333656|FBtr0333655|FBtr0333654|FBtr0305581|FBtr0073992|FBtr0333657 14787476|14787476|14787476|14787476|14787476|14787476|14787476 14789669|14790548|14789669|14789669|14789669|14789669|14790548 X - 14788922 14788961 3'utr rut FlyBase G67466.1 TTTAAGGCTATAAATTGCCCATAGACTGCTCCACCACCAT 24 14788940 0.847247003 4 23 114 0.964285714 1.431363764 0 0.125 0.25 24 1 0 27 X:14788922-14788961 6 rut FBtr0073992|FBtr0333657|FBtr0333654|FBtr0305581|FBtr0333655|FBtr0340467|FBtr0333656 14787476|14787476|14787476|14787476|14787476|14787476|14787476 14789669|14790548|14789669|14789669|14789669|14789669|14790548 AGACTG 6mer2-7 dme-miR-14-3p X - 14788924 14788951 3'utr rut FlyBase G50789.1 TAAATTGCCCATAGACTGCTCCACCACC 12 14788940 0.786874972 4 11 49 0.9375 1.176091259 0 0.25 0.4375 12 1 0 15 X:14788924-14788951 6 18 4516 FBgn0003301 229.9033333 3.326666667 5.11 0.078293776 5.410821643 3.522504892 1 1 1 0.1 dme-miR-282-5p 6mer2-7 GAGGCT X 1480438 1480443 + X_1480438_1480443_+ 0.999999752 0.999999863 0.999999807 7.07E-08 rush FBtr0339589 1480188 1481420 X + 1480421 1480466 5'utr rush FlyBase G57986.1 AAGGACGTGCAAAATTTGAGGCTTATCGAGTTCTAAGTTGGGAGAG 31 1480437 0.761585231 4 30 208 0.972222222 1.544068044 0.027777778 0.161290323 0.277777778 31 1 0 35 X:1480421-1480466 6 rush FBtr0339589 1480188 1481420 GAGGCT 6mer2-7 dme-miR-282-5p X + 1480360 1480457 5'utr rush FlyBase G43870.1 TCTTCATTGCAAGACCTTCGGACCCAATTTCGGATCTTTCATTATACCTATGCGTTAGATAAAGGACGTGCAAAATTTGAGGCTTATCGAGTTCTAAG 21 1480437 0.979291784 8 20 140 1 1.505149978 0.125 0.428571429 0.625 21 0 0 32 X:1480360-1480457 6 22 4517 FBgn0025381 3553.903333 199.46 304.35 0.006190377 0.110297804 0.072285198 1 1 1 0.1 dme-miR-305-5p 7mer-A1 GTACAAA X 1481381 1481387 + X_1481381_1481387_+ 0.782911437 0.782911709 0.782911573 2.12E-07 rush FBtr0070259|FBtr0339589 1480188|1480188 1481420|1481420 X + 1481262 1481420 3'utr rush FlyBase G57989.1 GTTCCCGTTTTTGGCGGATAAGAACCACTAAAATCGTATGTTTGGCGAGAGGATAAACTATATGGATATGTATACAACATAAGCAATTTGCAATTGCGATCATTAACTGTTTTCTATTTGTACAAAGCCCAAAAAACAATAAATTAATACTGTAAATTG 95 1481379 0.986358411 23 87 743 0.930434783 1.427323786 0.086956522 0.168421053 0.313043478 95 5 3 107 X:1481262-1481420 7 rush FBtr0070259|FBtr0339589 1480188|1480188 1481420|1481420 GTACAAA 7mer-A1 dme-miR-305-5p X + 1481018 1481399 3'utr rush FlyBase G43871.1 AACGGAAGCGATGCGAGCAGGAGGAGATTAAGGAGCTGCGCAAGATGACGGCATTCAAGGCTCGTCCGAATCCATTTAAATAGTGCTCGACGGAACCAATCGACTACCAAACGTTTGATAGCCCTGTCCAAATTTAAATGAAGTGAAGTCGATGCTACACATAATCGTGTTTACCGATGCATAGTTTTACCAGATTAACACAATTTTTGTCTCTTAACATTAACATTACTTTTACGCATATATCGTTCCCGTTTTTGGCGGATAAGAACCACTAAAATCGTATGTTTGGCGAGAGGATAAACTATATGGATATGTATACAACATAAGCAATTTGCAATTGCGATCATTAACTGTTTTCTATTTGTACAAAGCCCAAAAAACA 146 1481378 0.991576417 53 137 1106 0.948356808 2.305351369 0.079812207 0.363013699 0.563380282 146 11 0 202 X:1481018-1481399 7 31.5 4518 FBgn0025381 3553.903333 199.46 304.35 0.008863494 0.157926401 0.103499261 2 3 2.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA X 14827158 14827164 - X_14827158_14827164_- 0.82334464 0.823338936 0.823341788 4.03E-06 CG14408 FBtr0073990|FBtr0339446|FBtr0305580|FBtr0340466 14827056|14827056|14827056|14826865 14827787|14827787|14827787|14827787 X - 14827148 14827183 3'utr CG14408 FlyBase G67476.1 AAAAGCAAATAACTAAATGCTAGTCAACAAAAACGA 41 14827166 0.734298194 3 40 160 0.978723404 1.662757832 0 0.12195122 0.234042553 41 1 0 46 X:14827148-14827183 7 CG14408 FBtr0340466|FBtr0305580|FBtr0339446|FBtr0073990 14826865|14827056|14827056|14827056 14827787|14827787|14827787|14827787 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X - 14827148 14827184 3'utr CG14408 FlyBase G50797.1 AAAAAGCAAATAACTAAATGCTAGTCAACAAAAACGA 29 14827166 0.747366754 2 27 114 0.952380952 1.602059991 0.047619048 0.310344828 0.523809524 29 2 0 40 X:14827148-14827184 7 35 4519 FBgn0030581 268.9266667 10.35333333 15.88666667 0.130147004 3.380553767 2.203105329 2 2 2 0.1 dme-miR-31a-5p 7mer-m8 TCTTGCC X 14851077 14851083 - X_14851077_14851083_- 0.661572887 0.660445952 0.661009419 0.000796839 CG9521 FBtr0073985 14851003 14851256 X - 14851047 14851176 3'utr CG9521 FlyBase G67488.1 ATCACACCTTAAATGCAATGGCCAGTGTAAAATGGGGCTTTAGTTTTAGTTAAGGCCTTCGAAAACTTTTTGTTATTATGTGTAGTAATTCTTTCTTGCCTGAACTGATTCTAGTTTAAGATTTAGTTAT 85 14851081 0.898483573 19 72 801 0.848484848 1.62324929 0.090909091 0.141176471 0.262626263 85 14 1 84 X:14851047-14851176 7 CG9521 FBtr0073985 14851003 14851256 TCTTGCC 7mer-m8 dme-miR-31a-5p X - 14851039 14851103 3'utr CG9521 FlyBase G50803.1 TATTATGTGTAGTAATTCTTTCTTGCCTGAACTGATTCTAGTTTAAGATTTAGTTATATAAGCAT 45 14851081 0.613340139 11 43 437 0.948275862 1.740362689 0.103448276 0.244444444 0.413793103 45 3 0 55 X:14851039-14851103 7 47 4520 FBgn0030588 765.0066667 37.97666667 54.6 0.061437373 1.237602036 0.860805861 -2 -2 -2 0.1 dme-miR-308-3p 7mer-m1 TGTGATT X 14934583 14934589 - X_14934583_14934589_- 0.521223848 0.521223851 0.52122385 7.07E-08 pdgy FBtr0303294|FBtr0343521|FBtr0073972|FBtr0308838 14933668|14934038|14934038|14934038 14934629|14934629|14934629|14934629 X - 14934576 14934612 3'utr pdgy FlyBase G67498.1 CTTCGTAGGCTAAGAAATATTTTTGTGATTTTTTTTT 21 14934591 0.701898922 5 21 265 1 1.397940009 0.12 0.142857143 0.28 21 0 0 25 X:14934576-14934612 7 pdgy FBtr0303294|FBtr0343521|FBtr0073972|FBtr0308838 14933668|14934038|14934038|14934038 14934629|14934629|14934629|14934629 TGTGATT 7mer-m1 dme-miR-308-3p X - 14934578 14934613 3'utr pdgy FlyBase G50810.1 TCTTCGTAGGCTAAGAAATATTTTTGTGATTTTTTT 10 14934591 0.677574682 6 10 121 1 1.113943352 0 0.3 0.461538462 10 0 0 13 X:14934578-14934613 7 15 4521 FBgn0027601 126.1633333 5.696666667 8.713333333 0.118893498 2.633118783 1.721499617 2 2 2 0.1 dme-miR-92b-3p 7mer-A1 TGCAATA X 15010170 15010176 - X_15010170_15010176_- 0.747513362 0.745981453 0.746747408 0.001083217 hiw FBtr0346087 15010135 15010831 X - 15010164 15010204 3'utr hiw FlyBase G67499.1 TATTTTATGAATGCGACGAACGGAAGAATGCAATAAAAATC 15 15010171 0.725687124 6 12 52 0.8125 1.113943352 0.0625 0.066666667 0.125 15 3 0 13 X:15010164-15010204 7 hiw FBtr0346087 15010135 15010831 TGCAATA 7mer-A1 dme-miR-92b-3p X - 15010164 15010203 3'utr hiw FlyBase G50812.1 ATTTTATGAATGCGACGAACGGAAGAATGCAATAAAAATC 17 15010171 0.740985298 5 17 54 1 1.361727836 0.347826087 0.294117647 0.47826087 17 0 0 23 X:15010164-15010203 7 15.5 4522 FBgn0030600 813.3333333 5.783333333 8.796666667 0.019057377 2.680115274 1.762031072 -5 -5 -5 0.1 dme-miR-932-5p 8mer-A1 GGAATTGA X 15032858 15032865 + X_15032858_15032865_+ 0.667199521 0.659534683 0.663367102 0.005419832 be FBtr0073956 15032682 15042060 X + 15032797 15032874 3'utr be FlyBase G61413.1 ATGTAGCGGATATTGATTATTCAATATTTATGATGTAAAGCGACATCGCCAAAATGGTCTCGGAATTGATAATTGTTA 168 15032851 0.94541202 6 168 708 1 2.269512944 0.064516129 0.095238095 0.182795699 168 0 0 186 X:15032797-15032874 8 be FBtr0073956 15032682 15042060 GGAATTGA 8mer-A1 dme-miR-932-5p X + 15032830 15032876 3'utr be FlyBase G46374.1 TGTAAAGCGACATCGCCAAAATGGTCTCGGAATTGATAATTGTTAAT 105 15032851 0.889864131 2 105 417 1 2.204119983 0.01875 0.371428571 0.5875 105 0 0 160 X:15032830-15032876 8 134 4523 FBgn0052594 1740.783333 62.23 95.48 0.07697684 2.153302266 1.403435274 7 7 7 0.1 dme-miR-14-3p 7mer-A1 AGACTGA X 15032899 15032905 + X_15032899_15032905_+ 0.823114865 0.823308566 0.823211716 0.000136967 be FBtr0073956 15032682 15042060 X + 15032880 15032919 3'utr be FlyBase G61414.1 ATTAAAATAACCTTTGCAGAGACTGACCCAAATCCTCAGG 15 15032893 0.65624085 5 12 74 0.842105263 0.726998728 0.157894737 0.2 0.368421053 15 1 2 16 X:15032880-15032919 7 be FBtr0073956 15032682 15042060 AGACTGA 7mer-A1 dme-miR-14-3p X + 15032883 15032915 3'utr be FlyBase G46375.1 AAAATAACCTTTGCAGAGACTGACCCAAATCCT 11 15032893 0.596280687 5 10 47 0.961538462 1.397940009 0 0.545454545 0.807692308 11 1 0 25 X:15032883-15032915 7 13 4524 FBgn0052594 1740.783333 62.23 95.48 0.007467902 0.208902459 0.136154168 6 6 6 0.1 dme-bantam-3p 6mer3-8 TGATCT X 15032981 15032986 + X_15032981_15032986_+ 0.999930471 0.999923919 0.999927195 4.67E-06 be FBtr0073956 15032682 15042060 X + 15032937 15032995 3'utr be FlyBase G61415.1 GAAATACCTATTGAAAAAAACATGAAATACGCTAAACGAAACTTTGATCTGTATATAAA 20 15032981 0.972342583 7 20 118 1 1.342422681 0.090909091 0.05 0.136363636 20 0 0 22 X:15032937-15032995 6 be FBtr0073956 15032682 15042060 TGATCT 6mer3-8 dme-bantam-3p X + 15032949 15032995 3'utr be FlyBase G46376.1 GAAAAAAACATGAAATACGCTAAACGAAACTTTGATCTGTATATAAA 16 15032989 0.878212254 5 16 90 1 1.414973348 0 0.375 0.615384615 16 0 0 26 X:15032949-15032995 6 13.5 4525 FBgn0052594 1740.783333 62.23 95.48 0.007755129 0.216937169 0.141390867 0 -8 -4 0.1 dme-miR-263a-5p 6mer2-7 TGCCAT X 15033706 15033711 + X_15033706_15033711_+ 0.999999844 0.999999615 0.99999973 1.41E-07 be FBtr0073956 15032682 15042060 X + 15033684 15033726 5'utr be FlyBase G61417.1 AGCCGTCGACGACGGCCAATTATGCCATCCCCGTTTGGAGGTC 19 15033705 0.730773617 4 19 107 1 1.322219295 0.19047619 0.052631579 0.142857143 19 0 0 21 X:15033684-15033726 6 be FBtr0073956 15032682 15042060 TGCCAT 6mer2-7 dme-miR-263a-5p X + 15033691 15033727 5'utr be FlyBase G46378.1 GACGACGGCCAATTATGCCATCCCCGTTTGGAGGTCC 9 15033706 0.932382037 3 9 49 1 1.079181246 0.25 0.333333333 0.5 9 0 0 12 X:15033691-15033727 6 14 4526 FBgn0052594 1740.783333 62.23 95.48 0.008042356 0.224971879 0.146627566 1 0 0.5 0.1 dme-miR-276a-3p 6mer3-8 AGTTCC X 15033843 15033848 + X_15033843_15033848_+ 0.999824011 0.999821802 0.999822907 1.56E-06 be FBtr0073956 15032682 15042060 X + 15033800 15033888 5'utr be FlyBase G61418.1 AGAGCTGTCAAGGATTTGCGGCAGGCTCTGCAGAACTCCCCACAGTTCCATCCCAACCAGCTGACCTCAACGCGCAACCAAAGACAAAT 84 15033845 0.93775947 7 81 315 0.967032967 1.944482672 0.076923077 0.071428571 0.142857143 84 3 0 88 X:15033800-15033888 6 be FBtr0073956 15032682 15042060 AGTTCC 6mer3-8 dme-miR-276a-3p X + 15033815 15033878 5'utr be FlyBase G46379.1 TTGCGGCAGGCTCTGCAGAACTCCCCACAGTTCCATCCCAACCAGCTGACCTCAACGCGCAACC 34 15033845 0.871013476 3 30 122 0.955555556 1.633468456 0.133333333 0.323529412 0.488888889 34 2 0 43 X:15033815-15033878 6 49.5 4527 FBgn0052594 1740.783333 62.23 95.48 0.028435474 0.795436285 0.51843318 -2 -2 -2 0.1 dme-miR-283-5p 7mer-m8 TGATATT X 15041738 15041744 + X_15041738_15041744_+ 0.617162154 0.616859227 0.617010691 0.000214253 be FBtr0073957|FBtr0073956 15034089|15032682 15042060|15042060 X + 15041627 15041845 3'utr be FlyBase G61420.1 ATATATATATACCTATGAATCTGCCACAATCTGTCACACCTGCCAGCCACAAAAAAGAGTATAAGATGAGTGAATGATTAGAGAGAAACAAAAAATACCGAAAACACAATGTGATATTCTCTGGATATGCGATGAACTGAGGAGACCTACGCATATACCTAATTAGCTAGGGAGAAGCGAACTAGGAGATATAAACCATAAGCTAGATTAAGTGAATTA 581 15041743 0.948861065 38 533 2628 0.91954023 2.028028724 0.202586207 0.166953528 0.304597701 581 51 5 640 X:15041627-15041845 7 be FBtr0073957|FBtr0073956 15034089|15032682 15042060|15042060 TGATATT 7mer-m8 dme-miR-283-5p X + 15041628 15041842 3'utr be FlyBase G46381.1 TATATATATACCTATGAATCTGCCACAATCTGTCACACCTGCCAGCCACAAAAAAGAGTATAAGATGAGTGAATGATTAGAGAGAAACAAAAAATACCGAAAACACAATGTGATATTCTCTGGATATGCGATGAACTGAGGAGACCTACGCATATACCTAATTAGCTAGGGAGAAGCGAACTAGGAGATATAAACCATAAGCTAGATTAAGTGAA 367 15041743 0.955283087 36 335 1540 0.91005291 2.11058971 0.218694885 0.386920981 0.603174603 367 48 3 516 X:15041628-15041842 7 157.5 4528 FBgn0052594 1740.783333 62.23 95.48 0.09047651 2.530933633 1.649560117 -5 -5 -5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 15051306 15051311 + X_15051306_15051311_+ 0.999999883 0.999956382 0.999978133 3.08E-05 CG5541 FBtr0073959|FBtr0073958 15051108|15051108 15051842|15051842 X + 15051275 15051338 3'utr CG5541 FlyBase G61430.1 ACAGAACCACCAATGCGTGACCTTTCGCTGTACCAAAACCATAGCCTACAGTTAGTCGTAATAT 21 15051316 0.962332074 6 20 118 0.956521739 1.342422681 0.130434783 0.095238095 0.173913043 21 1 0 22 X:15051275-15051338 6 CG5541 FBtr0073959|FBtr0073958 15051108|15051108 15051842|15051842 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 15051274 15051339 3'utr CG5541 FlyBase G46391.1 TACAGAACCACCAATGCGTGACCTTTCGCTGTACCAAAACCATAGCCTACAGTTAGTCGTAATATA 19 15051304 0.964291202 8 19 99 1 1.397940009 0.2 0.263157895 0.44 19 0 0 25 X:15051274-15051339 6 15.5 4529 FBgn0030603 416.6633333 20.09 30.71333333 0.037200298 0.771528123 0.504666811 -10 2 -4 0.1 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT X 15051502 15051508 + X_15051502_15051508_+ 0.62020403 0.620204031 0.62020403 0 CG5541 FBtr0073959|FBtr0073958 15051108|15051108 15051842|15051842 X + 15051485 15051531 3'utr CG5541 FlyBase G61432.1 AATTTAAAGCCAAAATGTGGTGCTCTTAAATGTATATGCTACATATG 42 15051501 0.845618218 7 41 330 0.960784314 1.69019608 0.176470588 0.19047619 0.333333333 42 2 0 49 X:15051485-15051531 7 CG5541 FBtr0073959|FBtr0073958 15051108|15051108 15051842|15051842 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" X + 15051485 15051522 3'utr CG5541 FlyBase G46393.1 AATTTAAAGCCAAAATGTGGTGCTCTTAAATGTATATG 11 15051501 0.78149501 4 10 73 0.941176471 1.204119983 0.235294118 0.454545455 0.647058824 11 1 0 16 X:15051485-15051522 7 26.5 4530 FBgn0030603 416.6633333 20.09 30.71333333 0.063600509 1.319064211 0.862817452 1 1 1 0.1 dme-miR-34-5p 8mer-A1 CACTGCCA X 15064479 15064486 + X_15064479_15064486_+ 0.678407766 0.678407149 0.678407457 4.95E-07 CG5548 FBtr0073960|FBtr0340425|FBtr0340424 15064402|15064402|15064402 15064548|15064548|15064926 X + 15064455 15064524 3'utr CG5548 FlyBase G61434.1 AGGCGACGCTCCTGGCCGCGGATTCACTGCCACTGCCCCATGTTGCAAGCTAGTTTCCAGCGGAAATGTC 23 15064477 0.954425967 5 23 104 1 1.491361694 0.193548387 0.217391304 0.419354839 23 0 0 31 X:15064455-15064524 8 CG5548 FBtr0340424 15064402 15064926 CACTGCCA 8mer-A1 dme-miR-34-5p X + 15064462 15064502 3'utr CG5548 FlyBase G46394.1 GCTCCTGGCCGCGGATTCACTGCCACTGCCCCATGTTGCAA 8 15064477 0.960478759 3 7 34 0.909090909 1 0.181818182 0.25 0.454545455 8 1 0 10 X:15064462-15064502 8 14 4531 FBgn0030605 769.6633333 180.22 277.04 0.018189771 0.077682832 0.050534219 2 2 2 0.1 dme-miR-79-3p 8mer-A1 TAGCTTTA X 15068873 15068880 + X_15068873_15068880_+ 0.62535509 0.625363127 0.625359109 5.66E-06 dob FBtr0073961 15068864 15069091 X + 15068844 15068903 stop_codon dob FlyBase G61437.1 GGGGACATCCGGTGTTCATTAGGCGCCATTAGCTTTATCAGCGATCGTCCCATCGATCGG 37 15068872 0.984102479 2 34 270 0.931818182 1.612783857 0.25 0.162162162 0.295454545 37 3 0 41 X:15068844-15068903 8 dob FBtr0073961 15068864 15069091 TAGCTTTA 8mer-A1 dme-miR-79-3p X + 15068861 15068892 stop_codon dob FlyBase G46397.1 ATTAGGCGCCATTAGCTTTATCAGCGATCGTC 14 15068872 0.85355754 3 14 97 1 1.342422681 0.181818182 0.5 0.681818182 14 0 0 22 X:15068861-15068892 8 25 4532 FBgn0030607 31.33333333 1.986666667 2.963333333 0.79787234 12.58389262 8.436445444 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 15069031 15069036 + X_15069031_15069036_+ 0.719813344 0.764456013 0.742134678 0.031567156 dob FBtr0073961|FBtr0073961|FBtr0073961 15068864|15068864|15068864 15069091|15069091|15069091 X + 15069011 15069045 3'utr dob FlyBase G61438.1 TTTTTTTTATGTACTGACTGCTGTGAACAAAATAA 28 15069030 0.699729444 5 27 166 0.966666667 1.462397998 0.033333333 0.071428571 0.133333333 28 1 0 29 X:15069011-15069045 6 dob FBtr0073961|FBtr0073961|FBtr0073961 15068864|15068864|15068864 15069091|15069091|15069091 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X + 15069019 15069048 3'utr dob FlyBase G46398.1 ATGTACTGACTGCTGTGAACAAAATAAATT 23 15069030 0.691427492 4 22 114 0.972972973 1.556302501 0 0.47826087 0.675675676 23 1 0 36 X:15069019-15069048 6 25.5 4533 FBgn0030607 31.33333333 1.986666667 2.963333333 0.813829787 12.83557047 8.605174353 1 1 1 0.1 dme-miR-980-3p 6mer2-7 GCAGCT X 15082310 15082315 + X_15082310_15082315_+ 0.992965303 0.990812864 0.991889084 0.001521977 CG33177 FBtr0073962 15082192 15082369 X + 15082267 15082326 3'utr CG33177 FlyBase G61443.1 AGGTTTTGGGTGCTCATTTTCAGTGAAACGTATGGTTAATTTAGCAGCTTTTGTCCTATA 11 15082316 0.990071182 7 11 109 1 1.079181246 0.166666667 0.090909091 0.166666667 11 0 0 12 X:15082267-15082326 6 CG33177 FBtr0073962 15082192 15082369 GCAGCT 6mer2-7 dme-miR-980-3p X + 15082245 15082334 3'utr CG33177 FlyBase G46401.1 AGCACCAGTGATGTCAAGGTACAGGTTTTGGGTGCTCATTTTCAGTGAAACGTATGGTTAATTTAGCAGCTTTTGTCCTATAAGTAGGAA 7 15082317 0.989282418 7 7 65 1 1.146128036 0.214285714 0.571428571 0.785714286 7 0 0 14 X:15082245-15082334 6 6.5 4534 FBgn0053177 17.33333333 2.496666667 3.806666667 0.375 2.603471295 1.707530648 -6 -7 -6.5 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA X 15088496 15088503 + X_15088496_15088503_+ 0.622828739 0.595973959 0.609401349 0.01898914 CG5599 FBtr0073964 15088247 15088629 X + 15088477 15088509 3'utr CG5599 FlyBase G61448.1 ACTTTTATCGTTGTTAACCTGCATTTATATATC 11 15088490 0.665580778 4 11 110 1 1.041392685 0.090909091 0 0 11 0 0 11 X:15088477-15088509 8 CG5599 FBtr0073964 15088247 15088629 TGCATTTA 8mer-A1 dme-miR-277-3p X + 15088485 15088508 3'utr CG5599 FlyBase G46407.1 CGTTGTTAACCTGCATTTATATAT 8 15088489 0.667608041 4 5 79 0.727272727 0.602059991 0 0.375 0.545454545 8 2 1 8 X:15088485-15088508 8 9.5 4535 FBgn0030612 84.33666667 5.47 8.336666667 0.112643769 1.736745887 1.139544182 6 7 6.5 0.1 dme-miR-317-3p 8mer-A1 TGTGTTCA X 1515756 1515763 + X_1515756_1515763_+ 0.631134031 0.631129242 0.631131636 3.39E-06 inc FBtr0339591|FBtr0070260|FBtr0339590 1515389|1515389|1515389 1517615|1517615|1517137 X + 1515734 1515805 3'utr inc FlyBase G57995.1 ACGAAGTGTGTGCGGGCGTGCATGTGTTCAACTTGTAGTAAACCAGATAGACCCGACTGTACGAGCAACAAG 45 1515756 0.944432882 8 43 296 0.965517241 1.748188027 0.172413793 0.266666667 0.431034483 45 2 0 56 X:1515734-1515805 8 inc FBtr0070260|FBtr0339590|FBtr0339591 1515389|1515389|1515389 1517615|1517137|1517615 TGTGTTCA 8mer-A1 dme-miR-317-3p X + 1515734 1515794 3'utr inc FlyBase G43877.1 ACGAAGTGTGTGCGGGCGTGCATGTGTTCAACTTGTAGTAAACCAGATAGACCCGACTGTA 21 1515756 0.980218697 4 21 146 1 1.491361694 0.322580645 0.380952381 0.580645161 21 0 0 31 X:1515734-1515794 8 30 4536 FBgn0025394 956.7333333 41.24 63.02 0.0313567 0.727449079 0.476039353 0 0 0 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA X 1516418 1516423 + X_1516418_1516423_+ 0.999842579 0.99844245 0.999142515 0.000990091 inc FBtr0339591|FBtr0070260|FBtr0339590 1515389|1515389|1515389 1517615|1517615|1517137 X + 1516319 1516438 3'utr inc FlyBase G57997.1 GTTTTGTGTAGGCCCGGTTTTACTACCTTGAGCTTTATTTTAGAAAACGAGCAAGGCGAAGATCAACTTTAGGAAATCAATTGAATCACGACTGAATTTATGTGAACTTGCACTCAAAGA 22 1516416 0.983555366 11 20 159 0.884615385 1.06069784 0.115384615 0.090909091 0.230769231 22 2 1 23 X:1516319-1516438 6 inc FBtr0070260|FBtr0339590|FBtr0339591 1515389|1515389|1515389 1517615|1517137|1517615 ATGTGA 6mer3-8 dme-miR-1003-3p X + 1516388 1516476 3'utr inc FlyBase G43879.1 TAGGAAATCAATTGAATCACGACTGAATTTATGTGAACTTGCACTCAAAGAAAATACATACATGCGAATACATTATAGTGAGGATATAC 21 1516400 0.974942179 12 21 129 1 1.51851394 0.121212121 0.428571429 0.636363636 21 0 0 33 X:1516388-1516476 6 11.5 4537 FBgn0025394 956.7333333 41.24 63.02 0.012020068 0.27885548 0.182481752 2 18 10 0.1 dme-miR-1012-3p 6mer3-8 TTGACT X 1516684 1516689 + X_1516684_1516689_+ 0.794007914 0.993729496 0.893868705 0.141224498 inc FBtr0339591|FBtr0070260|FBtr0339590 1515389|1515389|1515389 1517615|1517615|1517137 X + 1516624 1516728 3'utr inc FlyBase G57999.1 AGCGAAAATTGAAGATGATCCAGAACGTCGCCACCTACTCGTACCCATTTTGTATCCATTTTGACTTATTTTACGAGCACAGCTGGTGCAGATTATATAGAGTAT 14 1516683 0.983791318 9 12 95 0.9375 0.875061263 0.125 0.071428571 0.1875 14 0 1 15 X:1516624-1516728 6 inc FBtr0070260|FBtr0339590|FBtr0339591 1515389|1515389|1515389 1517615|1517137|1517615 TTGACT 6mer3-8 dme-miR-1012-3p X + 1516671 1516765 3'utr inc FlyBase G43881.1 TTTTGTATCCATTTTGACTTATTTTACGAGCACAGCTGGTGCAGATTATATAGAGTATAACTTATGCTTACGAGGATTATTTCGACGAAGAACCT 8 1516684 0.986567326 5 7 66 1 1 0.2 0.25 0.4 8 0 0 10 X:1516671-1516765 6 3.5 4538 FBgn0025394 956.7333333 41.24 63.02 0.003658282 0.084869059 0.055537924 1 0 0.5 0.1 dme-miR-970-3p 7mer-A1 CTTATGA X 15317995 15318001 + X_15317995_15318001_+ 0.823349401 0.823340462 0.823344932 6.29E-06 gce FBtr0310308|FBtr0303199|FBtr0303198|FBtr0331765 15317764|15317764|15317764|15317764 15319074|15319074|15319074|15319074 X + 15317967 15318040 3'utr gce FlyBase G61469.1 GATACGGATAGATAACCTTTAACCCCAACTTATGAGTGAGCCTGAGACAAGCATACTTTAGATACCCTGCCCAC 46 15318004 0.942364034 6 43 177 0.96 1.681241237 0.1 0.086956522 0.16 46 2 0 48 X:15317967-15318040 7 gce FBtr0303198|FBtr0331765|FBtr0310308|FBtr0303199 15317764|15317764|15317764|15317764 15319074|15319074|15319074|15319074 CTTATGA 7mer-A1 dme-miR-970-3p X + 15317928 15318054 3'utr gce FlyBase G46421.1 GATGGGTAACTGCTGCGGTACAGTTTAGGTACAGATACAGATACGGATAGATAACCTTTAACCCCAACTTATGAGTGAGCCTGAGACAAGCATACTTTAGATACCCTGCCCACATGCACACACTCAC 62 15318008 0.95257434 13 61 272 0.989247312 1.963787827 0.096774194 0.35483871 0.569892473 62 1 0 92 X:15317928-15318054 7 40 4539 FBgn0261703 2542.05 55.46 85.10666667 0.015735332 0.721240534 0.469998433 -9 -13 -11 0.1 dme-miR-14-3p 7mer-m8 AAGACTG X 15318511 15318517 + X_15318511_15318517_+ 0.665189643 0.665185816 0.66518773 2.69E-06 gce FBtr0310308|FBtr0303199|FBtr0303198|FBtr0331765 15317764|15317764|15317764|15317764 15319074|15319074|15319074|15319074 X + 15318367 15318565 3'utr gce FlyBase G61472.1 AACACCCACAAAGGATTAAGATAATGATATAAGTAATGATTAGCGTAAATGGGAGGATTTAAACAATTATTATGCTAAATGAAATATACTATTAAAAACCTATGTACCATACGTTGTGCGTAATGCCCAAACTAAACGTGATAAAAGACTGTTACCAACTACATACACACATACATAATACCGAGATGGAAACAACCGT 1674 15318518 0.959445607 24 1640 7977 0.981445313 2.604226053 0.010253906 0.176821983 0.327148438 1674 34 4 2010 X:15318367-15318565 7 gce FBtr0303198|FBtr0331765|FBtr0310308|FBtr0303199 15317764|15317764|15317764|15317764 15319074|15319074|15319074|15319074 AAGACTG 7mer-m8 dme-miR-14-3p X + 15318450 15318565 3'utr gce FlyBase G46424.1 ATATACTATTAAAAACCTATGTACCATACGTTGTGCGTAATGCCCAAACTAAACGTGATAAAAGACTGTTACCAACTACATACACACATACATAATACCGAGATGGAAACAACCGT 1196 15318518 0.764379484 16 1165 5648 0.974330357 2.200651554 0.0078125 0.368729097 0.578683036 1196 36 10 1746 X:15318450-15318565 7 1378.5 4540 FBgn0261703 2542.05 55.46 85.10666667 0.542278869 24.85575189 16.19732101 -7 -7 -7 0.1 dme-miR-305-5p 8mer-m1 AGTACAAT X 15318814 15318821 + X_15318814_15318821_+ 0.569821837 0.570363041 0.570092439 0.000382686 gce FBtr0310308|FBtr0303199|FBtr0303198|FBtr0331765 15317764|15317764|15317764|15317764 15319074|15319074|15319074|15319074 X + 15318743 15318858 3'utr gce FlyBase G61474.1 AAGATAAATCCGGACGAATTGATGGATTTTGGCCAAGCACGGTGCACTGCATATATGTAGCAAGTGAGCCAAGTACAATTTACACAAATGTATACATAATTAGATGCATATATGGT 36 15318821 0.843914975 12 35 204 0.952380952 1.602059991 0.214285714 0.166666667 0.285714286 36 2 0 40 X:15318743-15318858 8 gce FBtr0303198|FBtr0331765|FBtr0310308|FBtr0303199 15317764|15317764|15317764|15317764 15319074|15319074|15319074|15319074 AGTACAAT 8mer-m1 dme-miR-305-5p X + 15318791 15318857 3'utr gce FlyBase G46426.1 GCATATATGTAGCAAGTGAGCCAAGTACAATTTACACAAATGTATACATAATTAGATGCATATATGG 20 15318821 0.724906956 7 19 110 0.935483871 1.462397998 0.096774194 0.45 0.64516129 20 2 0 29 X:15318791-15318857 8 17 4541 FBgn0261703 2542.05 55.46 85.10666667 0.006687516 0.306527227 0.199749334 -7 -7 -7 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 15319063 15319068 + X_15319063_15319068_+ 0.999955523 0.999992305 0.999973914 2.60E-05 gce FBtr0310308|FBtr0303199|FBtr0303198|FBtr0331765 15317764|15317764|15317764|15317764 15319074|15319074|15319074|15319074 X + 15319040 15319080 3'utr gce FlyBase G61476.1 AATGTATTAGTGAATAAACTTGTGTACCTACATACAAAACA 42 15319062 0.73288839 4 41 324 0.956521739 1.643452676 0 0.095238095 0.173913043 42 2 0 44 X:15319040-15319080 6 gce FBtr0303198|FBtr0331765|FBtr0310308|FBtr0303199 15317764|15317764|15317764|15317764 15319074|15319074|15319074|15319074 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X + 15319043 15319079 3'utr gce FlyBase G46428.1 GTATTAGTGAATAAACTTGTGTACCTACATACAAAAC 32 15319062 0.707466968 4 31 236 0.960784314 1.213074825 0 0.5 0.68627451 32 0 2 49 X:15319043-15319079 6 37 4542 FBgn0261703 2542.05 55.46 85.10666667 0.014555182 0.667147494 0.434748551 1 1 1 0.1 dme-miR-970-3p 7mer-A1 CTTATGA X 15327101 15327107 + X_15327101_15327107_+ 0.762694615 0.786020747 0.774357681 0.016494043 Top1 FBtr0100294|FBtr0340434 15325917|15325917 15328029|15328029 X + 15327063 15327124 3'utr Top1 FlyBase G61499.1 TGGATGGATCTCGATGTGGTTTCGCTTTGATTTCGTACCTTATGATCATTTTAGTTAACATT 15 15327105 0.881818272 6 15 165 1 1.230448921 0 0.133333333 0.235294118 15 0 0 17 X:15327063-15327124 7 Top1 FBtr0100294|FBtr0340434 15325917|15325917 15328029|15328029 CTTATGA 7mer-A1 dme-miR-970-3p X + 15327051 15327124 3'utr Top1 FlyBase G46446.1 ACAAAGCCACATTGGATGGATCTCGATGTGGTTTCGCTTTGATTTCGTACCTTATGATCATTTTAGTTAACATT 14 15327105 0.964706856 6 14 143 1 1.397940009 0 0.357142857 0.64 14 0 0 25 X:15327051-15327124 7 10.5 4543 FBgn0004924 1711.443333 50.77666667 78.29333333 0.006135172 0.206787895 0.134111035 -4 -4 -4 0.1 dme-miR-283-5p 6mer3-8 TGATAT X 15327694 15327699 + X_15327694_15327699_+ 0.933445881 0.958021076 0.945733479 0.017377291 Top1 FBtr0100294|FBtr0340434 15325917|15325917 15328029|15328029 X + 15327675 15327756 3'utr Top1 FlyBase G61503.1 ACATATTATAATTAGTGATTGATATAATGTGAACGCAAACATCTGTGTGCGTTTGTCGTGGATTCGCATACGGAAGCGGGAG 11 15327696 0.978648405 7 11 80 1 1.079181246 0.25 0.090909091 0.166666667 11 0 0 12 X:15327675-15327756 6 Top1 FBtr0100294|FBtr0340434 15325917|15325917 15328029|15328029 TGATAT 6mer3-8 dme-miR-283-5p X + 15327666 15327712 3'utr Top1 FlyBase G46448.1 CGCCCAAACACATATTATAATTAGTGATTGATATAATGTGAACGCAA 7 15327694 0.979946123 3 7 51 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 X:15327666-15327712 6 6.5 4544 FBgn0004924 1711.443333 50.77666667 78.29333333 0.003797964 0.128011554 0.083021117 -2 0 -1 0.1 dme-bantam-3p 6mer3-8 TGATCT X 15340206 15340211 + X_15340206_15340211_+ 0.999980663 0.999884645 0.999932654 6.80E-05 HDAC6 FBtr0074008|FBtr0301774|FBtr0330405|FBtr0074010|FBtr0307383|FBtr0074009 15340014|15339631|15340167|15340014|15340014|15340014 15340360|15340360|15340360|15340360|15340360|15340360 X + 15340181 15340242 3'utr HDAC6 FlyBase G61519.1 CAATCCTCTAGCCCGCACCCACAACTGATCTGAAAACTGCTGCAACTGGCAGCCGGTCGGTC 18 15340206 0.939116067 3 15 74 0.842105263 0.903089987 0.157894737 0.055555556 0.105263158 18 2 1 16 X:15340181-15340242 6 HDAC6 FBtr0074009|FBtr0307383|FBtr0074010|FBtr0330405|FBtr0301774|FBtr0074008 15340014|15340014|15340014|15340167|15339631|15340014 15340360|15340360|15340360|15340360|15340360|15340360 TGATCT 6mer3-8 dme-bantam-3p X + 15340189 15340230 3'utr HDAC6 FlyBase G46454.1 TAGCCCGCACCCACAACTGATCTGAAAACTGCTGCAACTGGC 6 15340206 0.930712466 2 4 15 0.909090909 0.698970004 0 0.333333333 0.636363636 6 0 1 10 X:15340189-15340230 6 10 4545 FBgn0026428 186.77 5.076666667 7.796666667 0.053541789 1.969796454 1.282599401 0 0 0 0.1 dme-bantam-3p 6mer3-8 TGATCT X 15340314 15340319 + X_15340314_15340319_+ 0.999950748 0.999990971 0.999970859 2.85E-05 HDAC6 FBtr0074008|FBtr0301774|FBtr0330405|FBtr0074010|FBtr0307383|FBtr0074009 15340014|15339631|15340167|15340014|15340014|15340014 15340360|15340360|15340360|15340360|15340360|15340360 X + 15340268 15340331 3'utr HDAC6 FlyBase G61520.1 CACCATACCATTTATACAAATGCAAATTGTTAAAGTTATCAACTAATGATCTAATAAATAATTC 16 15340314 0.987328366 4 14 124 0.894736842 0.753327667 0 0.125 0.263157895 16 0 2 17 X:15340268-15340331 6 HDAC6 FBtr0074009|FBtr0307383|FBtr0074010|FBtr0330405|FBtr0301774|FBtr0074008 15340014|15340014|15340014|15340167|15339631|15340014 15340360|15340360|15340360|15340360|15340360|15340360 TGATCT 6mer3-8 dme-bantam-3p X + 15340295 15340326 3'utr HDAC6 FlyBase G46455.1 TGTTAAAGTTATCAACTAATGATCTAATAAAT 5 15340314 0.786498605 2 5 37 1 0.954242509 0 0.4 0.666666667 5 0 0 9 X:15340295-15340326 6 9.5 4546 FBgn0026428 186.77 5.076666667 7.796666667 0.0508647 1.871306632 1.218469431 0 0 0 0.1 dme-bantam-3p 7mer-A1 GATCTCA X 15381124 15381130 - X_15381124_15381130_- 0.823348559 0.823349561 0.82334906 7.07E-07 CG9164 FBtr0074014|FBtr0074012|FBtr0343351 15380637|15380369|15380637 15381343|15381343|15381343 X - 15381107 15381147 3'utr CG9164 FlyBase G67543.1 CGACTCGTAGGACCATAGATCTCACTGGGGGTCAGCAAACA 14 15381132 0.895301659 2 13 56 0.941176471 1.204119983 0.235294118 0.142857143 0.294117647 14 1 0 16 X:15381107-15381147 7 CG9164 FBtr0074012|FBtr0343351|FBtr0074014 15380369|15380637|15380637 15381343|15381343|15381343 GATCTCA 7mer-A1 dme-bantam-3p X - 15381107 15381153 3'utr CG9164 FlyBase G50838.1 TCATCACGACTCGTAGGACCATAGATCTCACTGGGGGTCAGCAAACA 18 15381132 0.818915307 2 18 82 1 1.431363764 0.37037037 0.444444444 0.62962963 18 0 0 27 X:15381107-15381153 7 16 4547 FBgn0030634 21.68 1.186666667 1.78 0.73800738 13.48314607 8.988764045 2 2 2 0.1 dme-miR-2b-2-5p 6mer2-7 TGAAGA X 15446389 15446394 - X_15446389_15446394_- 0.919983818 0.902604382 0.9112941 0.012289092 Scamp FBtr0332591|FBtr0074079|FBtr0332592 15446177|15446177|15446177 15447421|15447421|15449232 X - 15446299 15446407 3'utr Scamp FlyBase G67549.1 TTATCTATGTACATGAAGACAGCATATAAAATATATTGATTCACTTAAGTATTCACATTTTTTAGATACATTTTGTTCGTTTCTGTTTTGCTTGCAAGTCAAACTTATT 9 15446400 0.968385623 8 9 76 1 1 0.1 0.111111111 0.2 9 0 0 10 X:15446299-15446407 6 Scamp FBtr0332592|FBtr0074079|FBtr0332591 15446177|15446177|15446177 15449232|15447421|15447421 TGAAGA 6mer2-7 dme-miR-2b-2-5p X - 15446377 15446415 3'utr Scamp FlyBase G50845.1 ATTATCTATTATCTATGTACATGAAGACAGCATATAAAA 7 15446400 0.979040594 2 6 42 1 1.041392685 0 0.428571429 0.636363636 7 0 0 11 X:15446377-15446415 6 5 4548 FBgn0040285 2407.336667 124.0333333 190.8666667 0.002076984 0.040311744 0.026196298 6 6 6 0.1 dme-miR-970-3p 6mer3-8 TCTTAT X 15446668 15446673 - X_15446668_15446673_- 0.93957171 0.546115834 0.742843772 0.278215335 Scamp FBtr0332591|FBtr0074079|FBtr0332592 15446177|15446177|15446177 15447421|15447421|15449232 X - 15446654 15446699 3'utr Scamp FlyBase G67553.1 ACACACACACACTCACATATATACGATCTTATATATATAACAAACA 59 15446680 0.749197201 7 57 509 0.974358974 1.880813592 0 0.254237288 0.435897436 59 2 0 76 X:15446654-15446699 6 Scamp FBtr0332592|FBtr0074079|FBtr0332591 15446177|15446177|15446177 15449232|15447421|15447421 TCTTAT 6mer3-8 dme-miR-970-3p X - 15446653 15446696 3'utr Scamp FlyBase G50847.1 CACACACACTCACATATATACGATCTTATATATATAACAAACAT 28 15446681 0.775085366 6 25 242 0.833333333 1 0 0.285714286 0.444444444 28 4 2 30 X:15446653-15446696 6 43 4549 FBgn0040285 2407.336667 124.0333333 190.8666667 0.017862063 0.346681 0.225288159 7 8 7.5 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA X 15447312 15447317 - X_15447312_15447317_- 0.998404445 0.822720279 0.910562362 0.124227418 Scamp FBtr0332591|FBtr0074079|FBtr0332592 15446177|15446177|15446177 15447421|15447421|15449232 X - 15447268 15447373 5'utr Scamp FlyBase G67556.1 TCAATCAACCACGAACTCAAGCAGCACTCATCCTGCTTAACTGGGACAGAAAAAGATGATGATAGCCGCGCCAGAGAGAGGGAGATGGAGAAAGAACACTTAATAA 17 15447313 0.926394401 10 16 51 0.947368421 1.255272505 0.105263158 0.058823529 0.157894737 17 1 0 18 X:15447268-15447373 6 Scamp FBtr0332592|FBtr0074079|FBtr0332591 15446177|15446177|15446177 15449232|15447421|15447421 TGATGA 6mer3-8 dme-miR-2a-2-5p X - 15447283 15447362 5'utr Scamp FlyBase G50850.1 CGAACTCAAGCAGCACTCATCCTGCTTAACTGGGACAGAAAAAGATGATGATAGCCGCGCCAGAGAGAGGGAGATGGAGA 10 15447311 0.980839122 6 8 24 0.928571429 0.812913357 0.214285714 0.3 0.5 10 0 1 13 X:15447283-15447362 6 6 4550 FBgn0040285 2407.336667 124.0333333 190.8666667 0.002492381 0.048374093 0.031435557 -4 -6 -5 0.1 dme-miR-986-5p 8mer-A1 ATTCGAGA X 15447953 15447960 - X_15447953_15447960_- 0.624354928 0.503098539 0.563726734 0.085741223 Scamp FBtr0332592 15446177 15449232 X - 15447935 15448020 5'utr Scamp FlyBase G67560.1 CACCATGACGTTGTTGGCCAACGTGATAGGCGGTCTAATTTTGCTGTTCCACGCTGGCGAATTCGAGACCTTCTTCCTGGCCATCT 16 15447980 0.913899054 8 16 116 1 1.278753601 0.052631579 0.1875 0.315789474 16 0 0 19 X:15447935-15448020 8 Scamp FBtr0332592 15446177 15449232 ATTCGAGA 8mer-A1 dme-miR-986-5p X - 15447911 15447995 5'utr Scamp FlyBase G50852.1 ATAGGCGGTCTAATTTTGCTGTTCCACGCTGGCGAATTCGAGACCTTCTTCCTGGCCATCTTCTACACGATGCTCTTCTCGCCCG 11 15447966 0.983772138 6 10 83 1 1.278753601 0.105263158 0.545454545 0.736842105 11 0 0 19 X:15447911-15447995 8 5 4551 FBgn0040285 2407.336667 124.0333333 190.8666667 0.002076984 0.040311744 0.026196298 20 6 13 0.1 dme-miR-277-3p 6mer2-7 GCATTT X 15452575 15452580 + X_15452575_15452580_+ 0.881990778 0.986575387 0.934283083 0.07395248 Ahcy13 FBtr0346181|FBtr0332590|FBtr0074030 15452476|15452476|15452476 15453167|15452646|15452646 X + 15452541 15452637 3'utr Ahcy13 FlyBase G61539.1 GACGACGGACCCACACTAGTTATCTATTGTCTGCGCATTTCACTGTTCACCTAAGCAGCTCCAATAAAAACCCATCTCACGTACTCTCAGCGAGAGA 29 15452586 0.980257045 12 28 198 0.944444444 1.531478917 0.222222222 0.24137931 0.388888889 29 2 0 34 X:15452541-15452637 6 Ahcy13 FBtr0074030|FBtr0346181|FBtr0332590 15452476|15452476|15452476 15452646|15453167|15452646 GCATTT 6mer2-7 dme-miR-277-3p X + 15452553 15452640 3'utr Ahcy13 FlyBase G46471.1 ACACTAGTTATCTATTGTCTGCGCATTTCACTGTTCACCTAAGCAGCTCCAATAAAAACCCATCTCACGTACTCTCAGCGAGAGAAAA 13 15452571 0.969405674 9 13 87 1 1.342422681 0.227272727 0.538461538 0.727272727 13 0 0 22 X:15452553-15452640 6 11 4552 FBgn0014455 1593.303333 111.8466667 171.19 0.006903896 0.09834893 0.06425609 -11 4 -3.5 0.1 dme-miR-304-5p 6mer3-8 TGAGAT X 15455404 15455409 + X_15455404_15455409_+ 0.998414317 0.994573032 0.996493675 0.002716209 CG11655 FBtr0074031 15455302 15455551 X + 15455369 15455423 3'utr CG11655 FlyBase G61544.1 AACCTATACATCGTGCTAGCGCACGTAGACAAGGCTGAGATAGATGCTGGTTAAA 29 15455409 0.79933232 7 25 151 0.882352941 1.477121255 0.235294118 0.137931034 0.264705882 29 4 0 30 X:15455369-15455423 6 CG11655 FBtr0074031 15455302 15455551 TGAGAT 6mer3-8 dme-miR-304-5p X + 15455375 15455421 3'utr CG11655 FlyBase G46474.1 TACATCGTGCTAGCGCACGTAGACAAGGCTGAGATAGATGCTGGTTA 12 15455409 0.957516628 3 12 60 1 1.544068044 0.285714286 0.833333333 0.942857143 12 0 0 35 X:15455375-15455421 6 19 4553 FBgn0030638 234.6666667 16.39 24.77666667 0.080965909 1.159243441 0.766850531 -5 -5 -5 0.1 dme-miR-986-5p 6mer3-8 ATTCGA X 15464923 15464928 + X_15464923_15464928_+ 0.999999771 0.999995151 0.999997461 3.25E-06 CG6294 FBtr0308830 15464407 15465027 X + 15464888 15464945 5'utr CG6294 FlyBase G61549.1 TTTATTTATTGATAAGCCTTATCGCTGTTACTATGATTCGAAAATGCGTGATAGTTAA 11 15464932 0.9840066 5 10 80 0.928571429 1.113943352 0.071428571 0.272727273 0.428571429 11 1 0 13 X:15464888-15464945 6 CG6294 FBtr0308830 15464407 15465027 ATTCGA 6mer3-8 dme-miR-986-5p X + 15464905 15464945 5'utr CG6294 FlyBase G46481.1 CTTATCGCTGTTACTATGATTCGAAAATGCGTGATAGTTAA 5 15464932 0.979812771 3 5 35 1 0.903089987 0.125 0.6 0.75 5 0 0 8 X:15464905-15464945 6 7.5 4554 FBgn0030640 37.48 1.823333333 2.763333333 0.200106724 4.113345521 2.71411339 -9 -9 -9 0.1 dme-bantam-3p 7mer-A1 GATCTCA X 15485741 15485747 + X_15485741_15485747_+ 0.757722027 0.64138309 0.699552559 0.082264025 CG6340 FBtr0310060|FBtr0310061 15483273|15484567 15486612|15486612 X + 15485668 15485761 3'utr CG6340 FlyBase G61559.1 CGCGACTCCAGCAGCCGCTCCAGATCTCCGAAGGAAGAACAAGCCACAACACTTCGCGGTGGAGCTGTGGCCGGATCTCATATGCTGCTCGCTA 50 15485748 0.977626142 10 45 300 0.909090909 1.698970004 0.218181818 0.1 0.181818182 50 5 0 50 X:15485668-15485761 7 CG6340 FBtr0310060|FBtr0310061 15483273|15484567 15486612|15486612 GATCTCA 7mer-A1 dme-bantam-3p X + 15485705 15485782 3'utr CG6340 FlyBase G46489.1 AACAAGCCACAACACTTCGCGGTGGAGCTGTGGCCGGATCTCATATGCTGCTCGCTAAATCAGGCGGCGGAGCAGGAT 33 15485748 0.973872479 6 32 196 0.981132075 1.414973348 0.41509434 0.393939394 0.622641509 33 0 1 52 X:15485705-15485782 7 35 4555 FBgn0030648 403.1333333 30.77 47.32 0.086819911 1.137471563 0.73964497 -7 -7 -7 0.1 dme-miR-307a-3p 6mer2-7 GTTGTG X 15579482 15579487 + X_15579482_15579487_+ 0.999999783 0.999999637 0.99999971 1.41E-07 CG7872 FBtr0074046 15579434 15579857 X + 15579424 15579549 stop_codon CG7872 FlyBase G61572.1 TTTGAGGATTAGCCGCTGCTCTGCGATGTTCAAGTTTCATTGTTCCATCTAAAAGTCTGTTGTGTGCGTGTTGTAAAACCGATCCCAAATTCCTCGCCCTCGGCATCCCCATACCGTCTAAATTTT 75 15579483 0.987354063 14 69 602 0.929411765 1.596597096 0.294117647 0.133333333 0.235294118 75 5 1 79 X:15579424-15579549 6 CG7872 FBtr0074046 15579434 15579857 GTTGTG 6mer2-7 dme-miR-307a-3p X + 15579461 15579550 3'utr CG7872 FlyBase G46500.1 CATTGTTCCATCTAAAAGTCTGTTGTGTGCGTGTTGTAAAACCGATCCCAAATTCCTCGCCCTCGGCATCCCCATACCGTCTAAATTTTG 50 15579483 0.919210266 12 44 381 0.907894737 1.236789099 0.315789474 0.34 0.565789474 50 4 3 69 X:15579461-15579550 6 38.5 4556 FBgn0030658 603.0033333 44.82333333 68.86333333 0.063847077 0.858927642 0.559078368 -1 -1 -1 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG X 15579766 15579771 + X_15579766_15579771_+ 0.99975796 0.64656201 0.823159985 0.249747287 CG7872 FBtr0074046 15579434 15579857 X + 15579759 15579788 3'utr CG7872 FlyBase G61575.1 ATACCCCTACCTGGCTGGTCACAAAAAAAG 11 15579774 0.729296415 4 11 36 1 1.204119983 0.1875 0.363636364 0.5625 11 0 0 16 X:15579759-15579788 6 CG7872 FBtr0074046 15579434 15579857 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" X + 15579755 15579847 3'utr CG7872 FlyBase G46501.1 AATTATACCCCTACCTGGCTGGTCACAAAAAAAGCACGCCACATTCGCGTGTTTCCTAACTAACTTGACTAAACCGATTACTGTAATAAACTA 31 15579774 0.936405065 8 30 144 0.98 1.69019608 0.28 0.483870968 0.68 31 1 0 49 X:15579755-15579847 6 13.5 4557 FBgn0030658 603.0033333 44.82333333 68.86333333 0.022387936 0.30118242 0.196040467 -8 -8 -8 0.1 dme-bantam-3p 6mer3-8 TGATCT X 15585131 15585136 + X_15585131_15585136_+ 0.993895508 0.894046121 0.943970814 0.070604188 CG8097 FBtr0340344 15584989 15585249 X + 15585032 15585218 3'utr CG8097 FlyBase G61584.1 AAAAAACACAAAAACAAGAGGCTAATGCGAAACCATAGCAAAACTAAATGCTGGCTCAACAGTGGGCGGTAATAATATATGTAATAATATAATGACATGTGATCTTAAAAGGGCCATACAATATTGATATAACATAGTTACACCTCTCATTTTATCGATAATAATCAAAATATAGCAGTATCTACTT 122 15585131 0.965562643 23 120 637 0.986206897 2.155336037 0.131034483 0.147540984 0.282758621 122 2 0 143 X:15585032-15585218 6 CG8097 FBtr0340344 15584989 15585249 TGATCT 6mer3-8 dme-bantam-3p X + 15585026 15585179 3'utr CG8097 FlyBase G46509.1 AAAAAAAAAAAACACAAAAACAAGAGGCTAATGCGAAACCATAGCAAAACTAAATGCTGGCTCAACAGTGGGCGGTAATAATATATGTAATAATATAATGACATGTGATCTTAAAAGGGCCATACAATATTGATATAACATAGTTACACCTCTC 99 15585131 0.961362524 14 94 473 0.97260274 1.851258349 0.164383562 0.363636364 0.568493151 99 3 1 142 X:15585026-15585179 6 67 4558 FBgn0030660 130.6666667 8.276666667 12.6 0.512755102 8.095046315 5.317460317 0 0 0 0.1 dme-miR-8-3p 6mer2-7 AGTATT X 15585528 15585533 - X_15585528_15585533_- 0.999871766 0.999926538 0.999899152 3.87E-05 CG9220 FBtr0074064|FBtr0340347 15585287|15585287 15585993|15585993 X - 15585494 15585530 3'utr CG9220 FlyBase G67612.1 ATTTTAATGGTTGGCAGTCCCTTAGAAATAATAAATT 8 15585509 0.711000156 4 8 55 1 0.903089987 0.125 0 0 8 0 0 8 X:15585494-15585530 3 CG9220 FBtr0074064|FBtr0340347 15585287|15585287 15585993|15585993 AGTATT 6mer2-7 dme-miR-8-3p X - 15585495 15585562 3'utr CG9220 FlyBase G50882.1 ATTGTATAGATAATTATTAGGAAATACAAAGTATTTTAATGGTTGGCAGTCCCTTAGAAATAATAAAT 11 15585519 0.980119835 6 11 76 1 1.204119983 0.3125 0.363636364 0.5625 11 0 0 16 X:15585495-15585562 6 3.5 4559 FBgn0030662 132.6 4.106666667 6.293333333 0.026395173 0.852272727 0.556144068 -24 -14 -19 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 15585646 15585651 - X_15585646_15585651_- 1 0.999989715 0.999994857 7.28E-06 CG9220 FBtr0074064|FBtr0340347 15585287|15585287 15585993|15585993 X - 15585640 15585679 3'utr CG9220 FlyBase G67613.1 GGAACATTTATGGCGATTAAATGTAGTTACCAAAAATCAT 6 15585653 0.963419072 3 6 33 1 0.954242509 0.555555556 0.333333333 0.555555556 6 0 0 9 X:15585640-15585679 6 CG9220 FBtr0074064|FBtr0340347 15585287|15585287 15585993|15585993 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X - 15585598 15585716 3'utr CG9220 FlyBase G50883.1 ATGCTAAAAACAAATGAAATGTAAATAAGAGTAAAACGGAACATTTATGGCGATTAAATGTAGTTACCAAAAATCATTATTATGTATCTAATGATACATTGTTTTCTAACCAAAGTCGC 11 15585652 0.98168989 6 10 74 1 1.146128036 0.285714286 0.272727273 0.428571429 11 0 0 14 X:15585598-15585716 6 4 4560 FBgn0030662 132.6 4.106666667 6.293333333 0.030165913 0.974025974 0.63559322 2 1 1.5 0.1 dme-miR-1012-3p 6mer3-8 TTGACT X 15604179 15604184 - X_15604179_15604184_- 0.999987516 0.652164076 0.826075796 0.245948285 sog FBtr0340346 15603281 15605165 X - 15604138 15604206 3'utr sog FlyBase G67625.1 GCAACCCGAAAGTTTCAACTGATTGACTGAATGGCAAAAATAAAATTAGCTTTAAATATGTTTTTCGCA 83 15604184 0.812253897 5 77 539 0.925233645 1.51851394 0.08411215 0.204819277 0.38317757 83 6 2 99 X:15604138-15604206 6 sog FBtr0340346 15603281 15605165 TTGACT 6mer3-8 dme-miR-1012-3p X - 15604135 15604207 3'utr sog FlyBase G50893.1 AGCAACCCGAAAGTTTCAACTGATTGACTGAATGGCAAAAATAAAATTAGCTTTAAATATGTTTTTCGCAAGC 71 15604185 0.971572704 6 69 455 0.957446809 1.477121255 0.095744681 0.253521127 0.436170213 71 2 2 90 X:15604135-15604207 6 58.5 4561 FBgn0003463 399.53 8.35 12.89333333 0.146422046 7.005988024 4.537228542 0 1 0.5 0.1 dme-miR-92b-3p 6mer2-7 TGCAAT X 15701811 15701816 - X_15701811_15701816_- 0.997168985 0.999790269 0.998479627 0.001853539 Pis FBtr0074059|FBtr0074058 15701449|15701449 15703028|15702003 X - 15701740 15701945 3'utr Pis FlyBase G67630.1 AAATGAAACAACTCTTGATTCCAAGCTAAAAAAACAGAATTTTGAAGACGAATTGCGATCAGATGAAATATGGGCATTAGGCAACCAAATAGGCCGTAGTAGGAATTTAATTTATTTTTAATGCGCTATTGCAATGATTGTTGATTTTATTTGATATATTTTAGTTAGACGGGTGGTGAAATCACCCGACAATTTGTATTTAATAG 97 15701808 0.98313784 24 91 697 0.94017094 1.56427143 0.188034188 0.206185567 0.341880342 97 5 2 110 X:15701740-15701945 6 Pis FBtr0074059|FBtr0074058 15701449|15701449 15703028|15702003 TGCAAT 6mer2-7 dme-miR-92b-3p X - 15701781 15701828 3'utr Pis FlyBase G50896.1 TTAATGCGCTATTGCAATGATTGTTGATTTTATTTGATATATTTTAGT 30 15701807 0.690411725 11 29 334 0.978723404 1.662757832 0.404255319 0.4 0.617021277 30 1 0 46 X:15701781-15701828 6 27 4562 FBgn0030670 380.6666667 33.08333333 50.32333333 0.070928196 0.816120907 0.536530437 -8 -9 -8.5 0.1 dme-bantam-3p 7mer-m8 TGATCTC X 15702113 15702119 - X_15702113_15702119_- 0.661615234 0.661615243 0.661615239 0 Pis FBtr0074059 15701449 15703028 X - 15702053 15702137 3'utr Pis FlyBase G67632.1 TTGCCGTGCTCAAGGCCCTGATCTCGGTGATGCACGCCTACGTGGCGGGCATCGATCTGGCGGCCGTGGATGTACGCGAGCGGCA 46 15702110 0.970930719 7 42 238 0.918367347 1.051152522 0.244897959 0.043478261 0.102040816 46 1 3 45 X:15702053-15702137 7 Pis FBtr0074059 15701449 15703028 TGATCTC 7mer-m8 dme-bantam-3p X - 15702054 15702137 3'utr Pis FlyBase G50898.1 TTGCCGTGCTCAAGGCCCTGATCTCGGTGATGCACGCCTACGTGGCGGGCATCGATCTGGCGGCCGTGGATGTACGCGAGCGGC 20 15702110 0.967150286 6 18 98 0.9 1.431363764 0.166666667 0.4 0.6 20 3 0 27 X:15702054-15702137 7 29 4563 FBgn0030670 380.6666667 33.08333333 50.32333333 0.076182137 0.876574307 0.576273432 -9 -9 -9 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 15702290 15702295 - X_15702290_15702295_- 0.944101023 0.51117667 0.727638846 0.306123708 Pis FBtr0074059 15701449 15703028 X - 15702264 15702367 5'utr Pis FlyBase G67633.1 AATGCGATTGTATTACCAGAAGGACATACTCACATTCATGTGCTGCGTCAATGAGCTGTTTTACGTGTGCTTGTACCTCTTGCATTTCACCTACGGCCCGCTGA 43 15702288 0.837620263 10 38 362 0.905660377 1.204119983 0.301886792 0.186046512 0.339622642 43 3 2 48 X:15702264-15702367 6 Pis FBtr0074059 15701449 15703028 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X - 15702265 15702327 5'utr Pis FlyBase G50899.1 TGCTGCGTCAATGAGCTGTTTTACGTGTGCTTGTACCTCTTGCATTTCACCTACGGCCCGCTG 14 15702288 0.985631989 5 14 116 1 1.230448921 0.235294118 0.214285714 0.352941176 14 0 0 17 X:15702265-15702327 6 22 4564 FBgn0030670 380.6666667 33.08333333 50.32333333 0.057793345 0.664987406 0.437172948 -7 -7 -7 0.1 dme-miR-34-5p 6mer2-7 ACTGCC X 15706216 15706221 - X_15706216_15706221_- 0.999997819 0.999995271 0.999996545 1.77E-06 CG9281 FBtr0074056|FBtr0074057 15705804|15705804 15706932|15706932 X - 15706195 15706257 3'utr CG9281 FlyBase G67636.1 AGTAGTCGCAGCAAATTGTGTGAGAAACGATGTTAAACTGCCCTCCCAAATCGGAACCGTGAT 133 15706219 0.872496801 9 126 624 0.987421384 1.894869657 0.616352201 0.172932331 0.308176101 133 1 1 157 X:15706195-15706257 6 CG9281 FBtr0074057|FBtr0074056 15705804|15705804 15706932|15706932 ACTGCC 6mer2-7 dme-miR-34-5p X - 15706149 15706257 3'utr CG9281 FlyBase G50902.1 AGTAGTCGCAGCAAATTGTGTGAGAAACGATGTTAAACTGCCCTCCCAAATCGGAACCGTGATTTAGTTGCTCGCGGATTCGAACAAGACAATTAAATATTCTTCGATT 84 15706219 0.965607003 7 79 423 0.96 1.602059991 0.664 0.357142857 0.568 84 3 2 120 X:15706149-15706257 6 96.5 4565 FBgn0030672 2569.26 100.7833333 155.7866667 0.037559453 0.957499587 0.619436837 -2 -2 -2 0.1 dme-miR-252-5p 6mer3-8 GTACTT X 15706350 15706355 - X_15706350_15706355_- 0.999511414 0.999614732 0.999563073 7.30E-05 CG9281 FBtr0074056|FBtr0074057 15705804|15705804 15706932|15706932 X - 15706322 15706375 3'utr CG9281 FlyBase G67637.1 ATATATAAAAAATGAAAAGTGTACTTTATTTTTTTGTAATTTATTTAAGCCTTA 8 15706356 0.992272309 3 8 89 1 0.954242509 0 0.125 0.222222222 8 0 0 9 X:15706322-15706375 6 CG9281 FBtr0074057|FBtr0074056 15705804|15705804 15706932|15706932 GTACTT 6mer3-8 dme-miR-252-5p X - 15706305 15706363 3'utr CG9281 FlyBase G50903.1 TGAAAAGTGTACTTTATTTTTTTGTAATTTATTTAAGCCTTAACTATATATTTAAAAAT 5 15706356 0.988524404 3 5 52 1 0.77815125 0 0.2 0.333333333 5 0 0 6 X:15706305-15706363 6 4.5 4566 FBgn0030672 2569.26 100.7833333 155.7866667 0.001751477 0.04465024 0.028885656 1 1 1 0.1 dme-miR-318-3p 6mer2-7 CCAGTG X 15706914 15706919 - X_15706914_15706919_- 0.999975995 0.999897192 0.999936594 5.57E-05 CG9281 FBtr0074056|FBtr0074057|FBtr0340308 15705804|15705804|15706444 15706932|15706932|15706932 X - 15706881 15706929 3'utr CG9281 FlyBase G67641.1 TATCCCATATCCAGTGGATAGATAGCTGCCAACGGCCACACACTCGCAC 11 15706916 0.951827528 4 10 44 1 1.146128036 0 0.272727273 0.428571429 11 0 0 14 X:15706881-15706929 6 CG9281 FBtr0074057|FBtr0340308|FBtr0074056 15705804|15706444|15705804 15706932|15706932|15706932 CCAGTG 6mer2-7 dme-miR-318-3p X - 15706893 15706929 3'utr CG9281 FlyBase G50907.1 TATCCCATATCCAGTGGATAGATAGCTGCCAACGGCC 7 15706915 0.968875269 3 6 31 1 1.113943352 0 0.571428571 0.769230769 7 0 0 13 X:15706893-15706929 6 8 4567 FBgn0030672 2569.26 100.7833333 155.7866667 0.003113737 0.079378204 0.051352277 -3 -4 -3.5 0.1 dme-miR-8-3p 6mer3-8 CAGTAT X 15712115 15712120 + X_15712115_15712120_+ 0.99664634 0.999853182 0.998249761 0.002267621 CG15601 FBtr0074055|FBtr0339684|FBtr0339685|FBtr0339683 15712008|15712008|15712008|15712008 15712186|15712186|15712309|15712186 X + 15712083 15712137 3'utr CG15601 FlyBase G61595.1 TCCAGGGGATATTTATCAACCCGTTTGCCATTCAGTATATGTAGTCAAGCTAGTT 23 15712113 0.99188917 4 18 197 0.75 1.322219295 0.357142857 0.217391304 0.357142857 23 7 0 21 X:15712083-15712137 6 CG15601 FBtr0339683|FBtr0339685|FBtr0339684|FBtr0074055 15712008|15712008|15712008|15712008 15712186|15712309|15712186|15712186 CAGTAT 6mer3-8 dme-miR-8-3p X + 15712089 15712137 3'utr CG15601 FlyBase G46517.1 GGATATTTATCAACCCGTTTGCCATTCAGTATATGTAGTCAAGCTAGTT 16 15712113 0.988872975 4 14 135 0.884615385 1.361727836 0.346153846 0.375 0.615384615 16 3 0 23 X:15712089-15712137 6 16.5 4568 FBgn0030673 63.26333333 6.943333333 10.57666667 0.260814585 2.376380221 1.560037819 2 2 2 0.1 dme-miR-184-3p 7mer-A1 CCGTCCA X 15733336 15733342 + X_15733336_15733342_+ 0.819859659 0.815707786 0.817783723 0.002935837 CG8191 FBtr0074083 15733227 15733663 X + 15733293 15733365 3'utr CG8191 FlyBase G61667.1 CTTCTCGCCCTTCTCGGCCAGGATCTCCTCGATGTTGCGCTTGCCGTCCAGATCTGTGAACCAGTTCAGATTG 65 15733334 0.825457773 8 62 461 0.963855422 1.903089987 0.084337349 0.153846154 0.337349398 65 3 0 80 X:15733293-15733365 7 CG8191 FBtr0074083 15733227 15733663 CCGTCCA 7mer-A1 dme-miR-184-3p X + 15733293 15733361 3'utr CG8191 FlyBase G46564.1 CTTCTCGCCCTTCTCGGCCAGGATCTCCTCGATGTTGCGCTTGCCGTCCAGATCTGTGAACCAGTTCAG 37 15733334 0.974929206 5 34 264 0.905660377 1.079181246 0.188679245 0.351351351 0.547169811 37 2 3 48 X:15733293-15733361 7 47.5 4569 FBgn0030675 21.07666667 1.743333333 2.686666667 2.253677052 27.24665392 17.67990074 2 2 2 0.1 dme-miR-307a-3p 6mer2-7 GTTGTG X 15735658 15735663 + X_15735658_15735663_+ 0.464525573 0.656943803 0.560734688 0.136060214 l(1)G0136 FBtr0074084|FBtr0332613 15735491|15735491 15735780|15735780 X + 15735647 15735758 3'utr l(1)G0136 FlyBase G61671.1 CTAAATATTAAGTTGTGTTCTATAGTTAAATTTTAGTTGTAGCGCTAGGTAAGTGACGCACCCGCTTCCTTGCCGCAGGCTGGCAGTTTGTCCTCTTTAGCCCTAGTTCAAT 17 15735659 0.991393947 9 17 186 1 1.255272505 0.055555556 0.058823529 0.111111111 17 0 0 18 X:15735647-15735758 6 l(1)G0136 FBtr0332613|FBtr0074084 15735491|15735491 15735780|15735780 GTTGTG 6mer2-7 dme-miR-307a-3p X + 15735649 15735701 3'utr l(1)G0136 FlyBase G46567.1 AAATATTAAGTTGTGTTCTATAGTTAAATTTTAGTTGTAGCGCTAGGTAAGTG 11 15735659 0.993122932 7 10 115 0.842105263 1.204119983 0.105263158 0.454545455 0.684210526 11 3 0 16 X:15735649-15735701 6 8.5 4570 FBgn0026666 97.33333333 15.83666667 24.21333333 0.087328767 0.53672911 0.351046256 -1 -1 -1 0.1 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 15739983 15739990 + X_15739983_15739990_+ 0.631136314 0.392161499 0.511648907 0.168980702 CG8206 FBtr0074085|FBtr0346187 15739977|15739977 15740242|15740417 X + 15739950 15740005 stop_codon CG8206 FlyBase G61673.1 AGGTGAACGAGCGCGGCGAGCTGATTTAGGAACTCTAGTCAAAGGGGCATCAGTAG 58 15739983 0.955775943 7 50 233 0.848484848 1.271066772 0.348484848 0.120689655 0.227272727 58 8 2 56 X:15739950-15740005 8 CG8206 FBtr0074085|FBtr0346187 15739977|15739977 15740242|15740417 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X + 15739930 15740002 stop_codon CG8206 FlyBase G46570.1 TGCCCGCGTCCGGGTGATCAAGGTGAACGAGCGCGGCGAGCTGATTTAGGAACTCTAGTCAAAGGGGCATCAG 21 15739975 0.93865554 7 21 79 1 1.544068044 0.228571429 0.428571429 0.657142857 21 0 0 35 X:15739930-15740002 8 28.5 4571 FBgn0030679 236.6666667 29.25666667 45.08666667 0.120422535 0.974136949 0.632115925 0 8 4 0.1 dme-miR-304-5p 7mer-m8 TGAGATT X 15741420 15741426 - X_15741420_15741426_- 0.620203442 0.620203442 0.620203442 0 CG8944 FBtr0074201 15741341 15743214 X - 15741403 15741453 3'utr CG8944 FlyBase G67665.1 AATTTTATTTATCTTAGTAATACCGAATGAGATTTTAGTACCATACAATAT 50 15741426 0.877165987 4 49 390 0.983050847 1.763427994 0.169491525 0.14 0.271186441 50 1 0 58 X:15741403-15741453 7 CG8944 FBtr0074201 15741341 15743214 TGAGATT 7mer-m8 dme-miR-304-5p X - 15741407 15741447 3'utr CG8944 FlyBase G50924.1 ATTTATCTTAGTAATACCGAATGAGATTTTAGTACCATACA 23 15741426 0.853096921 4 22 173 1 1.62324929 0.023809524 0.608695652 0.785714286 23 0 0 42 X:15741407-15741447 7 35.5 4572 FBgn0030680 574.6266667 15.99666667 24.55666667 0.061779242 2.219212336 1.445635944 0 0 0 0.1 dme-miR-999-3p 8mer-A1 AGTTAACA X 15741730 15741737 - X_15741730_15741737_- 0.626709208 0.634327105 0.630518156 0.005386669 CG8944 FBtr0074201 15741341 15743214 X - 15741726 15741757 3'utr CG8944 FlyBase G67667.1 ATTCAAACAAATTGTGAAATAGTTAACAGAAG 6 15741746 0.790505627 2 6 34 1 0.903089987 0 0.333333333 0.5 6 0 0 8 X:15741726-15741757 8 CG8944 FBtr0074201 15741341 15743214 AGTTAACA 8mer-A1 dme-miR-999-3p X - 15741725 15741765 3'utr CG8944 FlyBase G50926.1 GGGCGAGCATTCAAACAAATTGTGAAATAGTTAACAGAAGC 7 15741746 0.827114046 2 6 32 1 1 0.2 0.285714286 0.5 7 0 0 10 X:15741725-15741765 8 5.5 4573 FBgn0030680 574.6266667 15.99666667 24.55666667 0.009571432 0.34382163 0.223971766 9 9 9 0.1 dme-miR-12-5p 6mer3-8 AATACT X 15742124 15742129 - X_15742124_15742129_- 0.99818073 0.832152847 0.915166788 0.117399454 CG8944 FBtr0074201 15741341 15743214 X - 15742112 15742157 3'utr CG8944 FlyBase G67669.1 CGCACTGTCCGCGAACGACTGAATCTGTAATACTACACTTCGAGGC 7 15742133 0.923782831 4 6 22 1 0.84509804 0.285714286 0 0 7 0 0 7 X:15742112-15742157 6 CG8944 FBtr0074201 15741341 15743214 AATACT 6mer3-8 dme-miR-12-5p X - 15742114 15742162 3'utr CG8944 FlyBase G50928.1 CGAAACGCACTGTCCGCGAACGACTGAATCTGTAATACTACACTTCGAG 6 15742134 0.956980478 4 5 23 1 1 0 0.5 0.7 6 0 0 10 X:15742114-15742162 6 2.5 4574 FBgn0030680 574.6266667 15.99666667 24.55666667 0.004350651 0.156282559 0.101805348 4 5 4.5 0.1 dme-miR-305-3p 6mer3-8 ATGTGC X 15742210 15742215 - X_15742210_15742215_- 0.999942205 0.999998306 0.999970256 3.97E-05 CG8944 FBtr0074201 15741341 15743214 X - 15742184 15742217 3'utr CG8944 FlyBase G67670.1 TAATGTGCAGGACGTTGCGTGGCCATTGACGCAT 9 15742214 0.912502726 2 9 53 1 1 0 0.111111111 0.2 9 0 0 10 X:15742184-15742217 6 CG8944 FBtr0074201 15741341 15743214 ATGTGC 6mer3-8 dme-miR-305-3p X - 15742182 15742218 3'utr CG8944 FlyBase G50929.1 ATAATGTGCAGGACGTTGCGTGGCCATTGACGCATTG 8 15742212 0.854036745 4 8 57 1 1.176091259 0 0.625 0.8 8 0 0 15 X:15742182-15742218 6 8.5 4575 FBgn0030680 574.6266667 15.99666667 24.55666667 0.014792213 0.5313607 0.346138184 -1 -3 -2 0.1 dme-miR-184-3p 6mer2-7 CCGTCC X 15742467 15742472 - X_15742467_15742472_- 0.999999994 0.999999987 0.999999991 0 CG8944 FBtr0074201 15741341 15743214 X - 15742396 15742538 3'utr CG8944 FlyBase G67672.1 TCTTCTCTCCAGACACACACAGCATTACAATCTGATTATTGATGTAAGAATTGTATACATTCCTTCCCGTCCCGCGATAATCGATGTGAGCGAGTAGATGCATTCCAGAACTAAGTATTTCATAAAGTATTCTATGTACTAAC 57 15742476 0.977225945 12 56 368 0.985714286 1.838849091 0.085714286 0.210526316 0.357142857 57 1 0 69 X:15742396-15742538 6 CG8944 FBtr0074201 15741341 15743214 CCGTCC 6mer2-7 dme-miR-184-3p X - 15742392 15742520 3'utr CG8944 FlyBase G50931.1 ACAGCATTACAATCTGATTATTGATGTAAGAATTGTATACATTCCTTCCCGTCCCGCGATAATCGATGTGAGCGAGTAGATGCATTCCAGAACTAAGTATTTCATAAAGTATTCTATGTACTAACTATA 46 15742475 0.977517176 12 42 283 0.940298507 1.498310554 0.28358209 0.260869565 0.492537313 46 3 1 63 X:15742392-15742520 6 37 4576 FBgn0030680 574.6266667 15.99666667 24.55666667 0.064389633 2.312981871 1.506719153 4 3 3.5 0.1 dme-miR-33-5p 7mer-A1 AATGCAA X 15742708 15742714 - X_15742708_15742714_- 0.782910158 0.782911805 0.782910981 1.13E-06 CG8944 FBtr0074201 15741341 15743214 X - 15742669 15742780 3'utr CG8944 FlyBase G67673.1 TCTATTCGAATCCACTTACCTGTAGACGTACTTAAACACAAAAAGTATTTAACAACAACGCCCATGAATGCAACTTTAGTTCTAAGAAATTGGTAGAACACTTACACTTCCT 138 15742716 0.961568986 15 124 764 0.896969697 1.392110465 0.066666667 0.173913043 0.309090909 138 12 5 148 X:15742669-15742780 7 CG8944 FBtr0074201 15741341 15743214 AATGCAA 7mer-A1 dme-miR-33-5p X - 15742661 15742737 3'utr CG8944 FlyBase G50932.1 AGTATTTAACAACAACGCCCATGAATGCAACTTTAGTTCTAAGAAATTGGTAGAACACTTACACTTCCTTTGACTTC 50 15742716 0.97091796 7 45 263 0.9 1.799340549 0 0.34 0.528571429 50 7 0 63 X:15742661-15742737 7 69.5 4577 FBgn0030680 574.6266667 15.99666667 24.55666667 0.120948094 4.344655136 2.830188679 2 2 2 0.1 dme-miR-79-3p 7mer-m8 TAGCTTT X 15743029 15743035 - X_15743029_15743035_- 0.620202038 0.620160063 0.62018105 2.96E-05 CG8944 FBtr0074201 15741341 15743214 X - 15742979 15743101 3'utr CG8944 FlyBase G67675.1 ACTAAAATTGAAACTGTAACTGCAACTGTAACATCTTTAAATTGCCAGCTACTTAGGCAACTTAGTTAGCTTTCTTAATCTTAGTTTTAGATTCACTCGATGTTCAGATCTATTTTGCAATTT 38 15743036 0.98396837 16 38 331 1 1.681241237 0.145833333 0.236842105 0.395833333 38 0 0 48 X:15742979-15743101 7 CG8944 FBtr0074201 15741341 15743214 TAGCTTT 7mer-m8 dme-miR-79-3p X - 15743014 15743103 3'utr CG8944 FlyBase G50936.2 TAACTAAAATTGAAACTGTAACTGCAACTGTAACATCTTTAAATTGCCAGCTACTTAGGCAACTTAGTTAGCTTTCTTAATCTTAGTTTT 26 15743036 0.986012817 7 23 201 0.955555556 1.633468456 0.088888889 0.423076923 0.666666667 26 2 0 43 X:15743014-15743103 7 15.5 4578 FBgn0030680 574.6266667 15.99666667 24.55666667 0.026974035 0.968951865 0.631193159 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 15751631 15751637 + X_15751631_15751637_+ 0.747046474 0.693127985 0.720087229 0.038126137 CG8239 FBtr0346188|FBtr0346188|FBtr0346188 15750934|15750934|15750934 15751737|15751737|15751737 X + 15751612 15751654 3'utr CG8239 FlyBase G61696.1 TTTAGGTTTGCGACCAACTTGTGATAAAAAAAAACCGCCCAAA 17 15751630 0.967457038 3 16 89 0.95 0.977723605 0.1 0.176470588 0.3 17 0 1 19 X:15751612-15751654 7 CG8239 FBtr0346188|FBtr0346188|FBtr0346188 15750934|15750934|15750934 15751737|15751737|15751737 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X + 15751612 15751651 3'utr CG8239 FlyBase G46588.1 TTTAGGTTTGCGACCAACTTGTGATAAAAAAAAACCGCCC 13 15751630 0.977635094 3 11 76 0.913043478 1.021189299 0 0.384615385 0.652173913 13 1 1 21 X:15751612-15751651 7 15 4579 FBgn0030683 250.2766667 19.80666667 30.47 0.059933673 0.757320767 0.492287496 1 1 1 0.1 dme-miR-252-5p 7mer-m8 GTACTTA X 15751984 15751990 - X_15751984_15751990_- 0.58829587 0.58827994 0.588287905 1.13E-05 Graf FBtr0074198|FBtr0340306|FBtr0074194|FBtr0345133|FBtr0340305|FBtr0340307|FBtr0074197 15751672|15751672|15751672|15751672|15751672|15751672|15751672 15752232|15752232|15752232|15752232|15752232|15752232|15752232 X - 15751922 15752019 3'utr Graf FlyBase G67686.2 TAACCTTTATAATACCATGACCATACAATGTACTTATTTTTAATTATTTAATAAGGAGTATAAACTCAGTGCAACTGCAAAGATTTATTTACTAATTG 49 15751991 0.953992865 9 46 455 0.983333333 1.770852012 0.116666667 0.224489796 0.366666667 49 1 0 59 X:15751922-15752019 7 Graf FBtr0340305|FBtr0340307|FBtr0074197|FBtr0074198|FBtr0340306|FBtr0074194|FBtr0345133 15751672|15751672|15751672|15751672|15751672|15751672|15751672 15752232|15752232|15752232|15752232|15752232|15752232|15752232 GTACTTA 7mer-m8 dme-miR-252-5p X - 15751924 15752015 3'utr Graf FlyBase G50941.3 CTTTATAATACCATGACCATACAATGTACTTATTTTTAATTATTTAATAAGGAGTATAAACTCAGTGCAACTGCAAAGATTTATTTACTAAT 31 15751991 0.871099308 7 26 269 0.86 1.156347201 0 0.451612903 0.66 31 5 2 43 X:15751924-15752015 7 27 4580 FBgn0030685 2113.673333 59.81666667 91.46666667 0.01277397 0.451379214 0.295189504 1 1 1 0.1 dme-miR-308-3p 7mer-m1 TGTGATT X 15793951 15793957 - X_15793951_15793957_- 0.521223855 0.521223817 0.521223836 7.07E-08 CG8974 FBtr0074186|FBtr0074187|FBtr0074189|FBtr0074185|FBtr0074188 15793719|15793719|15793719|15793719|15793719 15794100|15794100|15794100|15794100|15794100 X - 15793916 15793976 3'utr CG8974 FlyBase G67727.1 GTTGGGCAATAGTCGTTGGTGTGATTAATTAACATAAATTGTTAGCATTCGGTTATAATTG 24 15793950 0.990269412 8 22 223 0.896551724 1.414973348 0.344827586 0.208333333 0.344827586 24 3 0 26 X:15793916-15793976 7 CG8974 FBtr0074185|FBtr0074188|FBtr0074187|FBtr0074189|FBtr0074186 15793719|15793719|15793719|15793719|15793719 15794100|15794100|15794100|15794100|15794100 TGTGATT 7mer-m1 dme-miR-308-3p X - 15793916 15793986 3'utr CG8974 FlyBase G50962.1 TCTTAAACTCGTTGGGCAATAGTCGTTGGTGTGATTAATTAACATAAATTGTTAGCATTCGGTTATAATTG 23 15793950 0.9882527 6 22 199 1 1.51851394 0.272727273 0.260869565 0.484848485 23 0 0 33 X:15793916-15793986 7 19 4581 FBgn0030693 519 47.39666667 72.25333333 0.036608863 0.400872073 0.262963646 -7 -7 -7 0.1 dme-miR-308-3p 7mer-m1 TGTGATT X 15797138 15797144 - X_15797138_15797144_- 0.52122381 0.521220956 0.521222383 1.98E-06 CG32581 FBtr0113439|FBtr0074184 15796906|15796906 15797252|15797252 X - 15797103 15797155 3'utr CG32581 FlyBase G67735.1 ATAGTCGTTGGTGTGATTAATTAACATAAATTGTTAGCATTCGGTTATAATTG 8 15797137 0.986915946 5 8 75 1 1 0.2 0.25 0.4 8 0 0 10 X:15797103-15797155 7 CG32581 FBtr0074184|FBtr0113439 15796906|15796906 15797252|15797252 TGTGATT 7mer-m1 dme-miR-308-3p X - 15797123 15797154 3'utr CG32581 FlyBase G50969.1 TAGTCGTTGGTGTGATTAATTAACATAAATTG 9 15797136 0.74042703 3 9 75 1 1.113943352 0.076923077 0.222222222 0.461538462 9 0 0 13 X:15797123-15797154 7 8 4582 FBgn0052581 0 0 0 Inf Inf Inf -7 -8 -7.5 0.1 dme-miR-932-5p 6mer2-7 GAATTG X 15824574 15824579 + X_15824574_15824579_+ 0.99993764 0.999942563 0.999940102 3.54E-06 sd FBtr0112826|FBtr0074101|FBtr0308134|FBtr0310311|FBtr0074100|FBtr0346799|FBtr0308133|FBtr0308130|FBtr0308129|FBtr0112824|FBtr0112825|FBtr0112827|FBtr0074099|FBtr0308128|FBtr0340115|FBtr0310312|FBtr0310313|FBtr0308131|FBtr0308132|FBtr0301543|FBtr0301544 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15825722|15825722|15825722|15825722|15825722|15827682|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825495|15825495|15827681|15826608|15825722|15825722 X + 15824551 15824605 3'utr sd FlyBase G61750.1 AATAGTATCATCAATACGGCTAAGAATTGCGATAATAAGACGAGTAATGAAATTG 19 15824577 0.802784441 4 12 93 0.681818182 0.698970004 0.136363636 0.105263158 0.227272727 19 5 2 15 X:15824551-15824605 6 sd FBtr0346799|FBtr0310313|FBtr0301543|FBtr0308130|FBtr0308132|FBtr0074101|FBtr0308129|FBtr0112824|FBtr0310311|FBtr0074099|FBtr0308128|FBtr0308131|FBtr0074100|FBtr0301544|FBtr0308133|FBtr0112825|FBtr0112827|FBtr0112826|FBtr0340115|FBtr0310312|FBtr0308134 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15827682|15825495|15825722|15825722|15826608|15825722|15825722|15825722|15825722|15825722|15825722|15827681|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825495|15825722 GAATTG 6mer2-7 dme-miR-932-5p X + 15824566 15824610 3'utr sd FlyBase G46625.1 ACGGCTAAGAATTGCGATAATAAGACGAGTAATGAAATTGCCAAC 14 15824577 0.95915564 4 11 64 0.818181818 0.653212514 0.045454545 0.5 0.681818182 14 1 3 18 X:15824566-15824610 6 13 4583 FBgn0003345 3188.213333 125.3966667 192.3633333 0.004077519 0.103671017 0.067580447 -3 -3 -3 0.1 dme-miR-282-5p 6mer2-7 GAGGCT X 15825052 15825057 + X_15825052_15825057_+ 0.858604865 0.873261824 0.865933344 0.010363993 sd FBtr0112826|FBtr0074101|FBtr0308134|FBtr0310311|FBtr0074100|FBtr0346799|FBtr0308133|FBtr0308130|FBtr0308129|FBtr0112824|FBtr0112825|FBtr0112827|FBtr0074099|FBtr0308128|FBtr0340115|FBtr0310312|FBtr0310313|FBtr0308131|FBtr0308132|FBtr0301543|FBtr0301544 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15825722|15825722|15825722|15825722|15825722|15827682|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825495|15825495|15827681|15826608|15825722|15825722 X + 15825032 15825073 3'utr sd FlyBase G61753.1 ACAAGCAACCACAACCATTCGAGGCTGAGCAACACGAACACG 42 15825049 0.803691446 2 41 83 0.980392157 1.698970004 0.156862745 0.214285714 0.352941176 42 1 0 50 X:15825032-15825073 6 sd FBtr0346799|FBtr0310313|FBtr0301543|FBtr0308130|FBtr0308132|FBtr0074101|FBtr0308129|FBtr0112824|FBtr0310311|FBtr0074099|FBtr0308128|FBtr0308131|FBtr0074100|FBtr0301544|FBtr0308133|FBtr0112825|FBtr0112827|FBtr0112826|FBtr0340115|FBtr0310312|FBtr0308134 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15827682|15825495|15825722|15825722|15826608|15825722|15825722|15825722|15825722|15825722|15825722|15827681|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825495|15825722 GAGGCT 6mer2-7 dme-miR-282-5p X + 15825034 15825064 3'utr sd FlyBase G46627.1 AAGCAACCACAACCATTCGAGGCTGAGCAAC 19 15825050 0.822868326 2 18 39 0.891891892 1.51851394 0.081081081 0.684210526 0.837837838 19 4 0 33 X:15825034-15825064 6 30.5 4584 FBgn0003345 3188.213333 125.3966667 192.3633333 0.009566487 0.243228156 0.158554125 3 2 2.5 0.1 dme-miR-282-5p 6mer2-7 GAGGCT X 15825420 15825425 + X_15825420_15825425_+ 0.999985731 0.999999987 0.999992859 1.01E-05 sd FBtr0112826|FBtr0074101|FBtr0308134|FBtr0310311|FBtr0074100|FBtr0346799|FBtr0308133|FBtr0308130|FBtr0308129|FBtr0112824|FBtr0112825|FBtr0112827|FBtr0074099|FBtr0308128|FBtr0340115|FBtr0310312|FBtr0310313|FBtr0308131|FBtr0308132|FBtr0301543|FBtr0301544 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15825722|15825722|15825722|15825722|15825722|15827682|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825495|15825495|15827681|15826608|15825722|15825722 X + 15825338 15825503 3'utr sd FlyBase G61756.1 GAGGACCCAACGCCGATGGAATCAGTAACAAAGGCCGTGAGCCGTGAGCGCCATATAATACCACCAGCCTTTAAGCAAGGTTGAGGCTTATTTTAAGGGTTAGAAATACGATTGCAAGGAACGACACAATCAGAGCTTTTTGTTTTCCACCCAAAACGAGAAAGAA 80 15825419 0.970365173 18 76 435 0.957894737 1.959041392 0.084210526 0.1625 0.294736842 80 4 0 91 X:15825338-15825503 6 sd FBtr0346799|FBtr0310313|FBtr0301543|FBtr0308130|FBtr0308132|FBtr0074101|FBtr0308129|FBtr0112824|FBtr0310311|FBtr0074099|FBtr0308128|FBtr0308131|FBtr0074100|FBtr0301544|FBtr0308133|FBtr0112825|FBtr0112827|FBtr0112826|FBtr0340115|FBtr0310312|FBtr0308134 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15827682|15825495|15825722|15825722|15826608|15825722|15825722|15825722|15825722|15825722|15825722|15827681|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825495|15825722 GAGGCT 6mer2-7 dme-miR-282-5p X + 15825346 15825479 3'utr sd FlyBase G46629.1 AACGCCGATGGAATCAGTAACAAAGGCCGTGAGCCGTGAGCGCCATATAATACCACCAGCCTTTAAGCAAGGTTGAGGCTTATTTTAAGGGTTAGAAATACGATTGCAAGGAACGACACAATCAGAGCTTTTTG 29 15825419 0.95973905 10 28 139 1 1.643452676 0.204545455 0.448275862 0.636363636 29 0 0 44 X:15825346-15825479 6 20.5 4585 FBgn0003345 3188.213333 125.3966667 192.3633333 0.006429934 0.16348122 0.106569166 1 1 1 0.1 dme-miR-317-3p 7mer-A1 GTGTTCA X 15825573 15825579 + X_15825573_15825579_+ 0.823330016 0.823282393 0.823306204 3.37E-05 sd FBtr0112826|FBtr0074101|FBtr0308134|FBtr0310311|FBtr0074100|FBtr0346799|FBtr0308133|FBtr0308130|FBtr0308129|FBtr0112824|FBtr0112825|FBtr0112827|FBtr0074099|FBtr0308128|FBtr0340115|FBtr0308131|FBtr0308132|FBtr0301543|FBtr0301544 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15825722|15825722|15825722|15825722|15825722|15827682|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15827681|15826608|15825722|15825722 X + 15825515 15825616 3'utr sd FlyBase G61757.1 AAAAAAACCACATGGCAGGGGACAATGGAAGAGCCTCAAAACAAGAGATGATTGATTGGTGTTCAGTATCGAAATCAGATTTTTATTTGTGCAAAATAAAAA 36 15825568 0.94907559 15 33 206 0.928571429 1.591064607 0.166666667 0.111111111 0.238095238 36 3 0 39 X:15825515-15825616 7 sd FBtr0346799|FBtr0301543|FBtr0308130|FBtr0308132|FBtr0074101|FBtr0308129|FBtr0112824|FBtr0310311|FBtr0074099|FBtr0308128|FBtr0308131|FBtr0074100|FBtr0301544|FBtr0308133|FBtr0112825|FBtr0112827|FBtr0112826|FBtr0340115|FBtr0308134 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15827682|15825722|15825722|15826608|15825722|15825722|15825722|15825722|15825722|15825722|15827681|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722 GTGTTCA 7mer-A1 dme-miR-317-3p X + 15825557 15825613 3'utr sd FlyBase G46631.1 AAGAGATGATTGATTGGTGTTCAGTATCGAAATCAGATTTTTATTTGTGCAAAATAA 7 15825573 0.982724955 4 7 57 1 0.954242509 0.222222222 0.285714286 0.444444444 7 0 0 9 X:15825557-15825613 7 10 4586 FBgn0003345 3188.213333 125.3966667 192.3633333 0.003136553 0.079746936 0.051984959 5 0 2.5 0.1 dme-bantam-3p 8mer-A1 TGATCTCA X 15825755 15825762 + X_15825755_15825762_+ 0.631136383 0.631136382 0.631136382 0 sd FBtr0346799|FBtr0308131|FBtr0308132 15824447|15824447|15824447 15827682|15827681|15826608 X + 15825728 15825784 3'utr sd FlyBase G61759.1 AAAAACAAAAAAAAAAATACATTTAAATGATCTCAAAGTTACTTAAAACATATTTTT 691 15825754 0.966940761 12 668 4799 0.97260274 2.152288344 0.180365297 0.218523878 0.383561644 691 19 5 852 X:15825728-15825784 8 sd FBtr0346799|FBtr0308132|FBtr0308131 15824447|15824447|15824447 15827682|15826608|15827681 TGATCTCA 8mer-A1 dme-bantam-3p X + 15825730 15825801 3'utr sd FlyBase G46633.1 AAACAAAAAAAAAAATACATTTAAATGATCTCAAAGTTACTTAAAACATATTTTTTGTGTATAATTTTTTTT 588 15825754 0.981386736 13 561 4084 0.957972806 1.986211716 0.196538937 0.294217687 0.487021014 588 27 7 775 X:15825730-15825801 8 637.5 4587 FBgn0003345 3188.213333 125.3966667 192.3633333 0.199955252 5.083867195 3.314041137 1 1 1 0.1 dme-miR-305-3p 6mer3-8 ATGTGC X 15825995 15826000 + X_15825995_15826000_+ 0.541206951 0.965531463 0.753369207 0.300042731 sd FBtr0346799|FBtr0308131|FBtr0308132 15824447|15824447|15824447 15827682|15827681|15826608 X + 15825896 15826015 3'utr sd FlyBase G61760.1 AAGAGTATATATATTGAATAATATGTTTGAAACAAAGAACGCCGCAAAAGAAACAGATACAATATAGTTTTCCGAATTACCATTTAGATATGCATGGTCATGTGCAAATAGGATTAAGCC 14 15825979 0.983070797 9 14 111 1 1.204119983 0.1875 0.071428571 0.1875 14 0 0 16 X:15825896-15826015 6 sd FBtr0346799|FBtr0308132|FBtr0308131 15824447|15824447|15824447 15827682|15826608|15827681 ATGTGC 6mer3-8 dme-miR-305-3p X + 15825941 15826015 3'utr sd FlyBase G46635.1 AAAAGAAACAGATACAATATAGTTTTCCGAATTACCATTTAGATATGCATGGTCATGTGCAAATAGGATTAAGCC 12 15825979 0.98554193 7 12 92 1 1.255272505 0.111111111 0.25 0.5 12 0 0 18 X:15825941-15826015 6 6 4588 FBgn0003345 3188.213333 125.3966667 192.3633333 0.001881932 0.047848162 0.031190975 16 16 16 0.1 dme-miR-317-3p 6mer3-8 TGTGTT X 15826354 15826359 + X_15826354_15826359_+ 1 0.99999984 0.99999992 1.41E-07 sd FBtr0346799|FBtr0308131|FBtr0308132 15824447|15824447|15824447 15827682|15827681|15826608 X + 15826323 15826363 3'utr sd FlyBase G61763.2 CAAAGGAGCGAGGGAGCGTAGGAGGATCTTGTGTGTTAAGC 7 15826353 0.976056522 5 6 31 0.875 0.84509804 0.375 0.142857143 0.25 7 1 0 7 X:15826323-15826363 6 sd FBtr0346799|FBtr0308132|FBtr0308131 15824447|15824447|15824447 15827682|15826608|15827681 TGTGTT 6mer3-8 dme-miR-317-3p X + 15826284 15826364 3'utr sd FlyBase G46637.1 TCCTGTCGTGGGAGCGCGAGTGTTGTGAGGTGAGGAGGGCAAAGGAGCGAGGGAGCGTAGGAGGATCTTGTGTGTTAAGCG 14 15826353 0.982937289 5 11 75 0.826086957 1.278753601 0.47826087 0.5 0.695652174 14 4 0 19 X:15826284-15826364 6 7 4589 FBgn0003345 3188.213333 125.3966667 192.3633333 0.002195587 0.055822855 0.036389471 1 1 1 0.1 dme-miR-278-3p 6mer2-7 CCACCG X 15826445 15826450 + X_15826445_15826450_+ 1 1 1 0 sd FBtr0346799|FBtr0308131|FBtr0308132 15824447|15824447|15824447 15827682|15827681|15826608 X + 15826391 15826464 3'utr sd FlyBase G61764.1 CATAGTGGCAAAAATGGATATGTAAGTAATTGAATTAAGCATGTGTCGAATGATCCACCGTTAATTAAATTATT 42 15826451 0.979624202 8 42 292 1 1.698970004 0 0.166666667 0.3 42 0 0 50 X:15826391-15826464 6 sd FBtr0346799|FBtr0308132|FBtr0308131 15824447|15824447|15824447 15827682|15826608|15827681 CCACCG 6mer2-7 dme-miR-278-3p X + 15826416 15826463 3'utr sd FlyBase G46638.1 GTAATTGAATTAAGCATGTGTCGAATGATCCACCGTTAATTAAATTAT 23 15826451 0.984871112 5 21 171 0.9375 1.477121255 0.0625 0.260869565 0.46875 23 2 0 30 X:15826416-15826463 6 31 4590 FBgn0003345 3188.213333 125.3966667 192.3633333 0.009723314 0.247215503 0.161153373 -6 -6 -6 0.1 dme-miR-999-3p 6mer2-7 GTTAAC X 15850014 15850019 - X_15850014_15850019_- 0.999972021 0.999983329 0.999977675 7.99E-06 UBL3 FBtr0300787|FBtr0074174 15849729|15849729 15850363|15850363 X - 15850009 15850036 3'utr UBL3 FlyBase G67789.1 TTTTAGAAACCGGACTTGTTAACCTAAT 11 15850018 0.618038209 4 10 59 0.923076923 1.079181246 0.076923077 0.090909091 0.230769231 11 1 0 12 X:15850009-15850036 6 UBL3 FBtr0300787|FBtr0074174 15849729|15849729 15850363|15850363 GTTAAC 6mer2-7 dme-miR-999-3p X - 15849997 15850038 3'utr UBL3 FlyBase G51029.1 GCTTTTAGAAACCGGACTTGTTAACCTAATTAGAGAATGGGT 13 15850018 0.956789701 4 11 78 0.952380952 1.301029996 0.285714286 0.461538462 0.666666667 13 1 0 20 X:15849997-15850038 6 11.5 4591 FBgn0026076 761.7933333 45.88 70.04333333 0.015095958 0.25065388 0.164184077 -1 -1 -1 0.1 dme-miR-277-3p 6mer3-8 TGCATT X 15862920 15862925 + X_15862920_15862925_+ 0.949258241 0.700790252 0.825024247 0.175693337 Gbeta13F FBtr0074107|FBtr0074111|FBtr0074106|FBtr0346794|FBtr0074110|FBtr0331597|FBtr0074108 15862795|15862795|15862795|15862795|15862795|15862795|15862795 15863177|15866084|15866084|15866084|15866084|15866084|15866175 X + 15862906 15863043 3'utr Gbeta13F FlyBase G61788.1 AAAGAACTTGAAAATGCATTAAAGGGTGGGGTGGGGTGTCAGGTCAACGGTTGCGCAGTCTGCGGATAGTGTTTCACCCATCATCTACATTGTGATCTAATGTATATGATTCGGTGTTACCGTCTCTGTGGTAAATAT 36 15862923 0.82190442 14 36 247 1 1.662757832 0.282608696 0.25 0.413043478 36 0 0 46 X:15862906-15863043 6 Gbeta13F FBtr0074108|FBtr0331597|FBtr0074110|FBtr0346794|FBtr0074106|FBtr0074111|FBtr0074107 15862795|15862795|15862795|15862795|15862795|15862795|15862795 15866175|15866084|15866084|15866084|15866084|15866084|15863177 TGCATT 6mer3-8 dme-miR-277-3p X + 15862893 15862944 3'utr Gbeta13F FlyBase G46656.1 AGAGGAAAAAGAAAAAGAACTTGAAAATGCATTAAAGGGTGGGGTGGGGTGT 23 15862923 0.955168166 5 23 108 1 1.505149978 0.28125 0.304347826 0.5 23 0 0 32 X:15862893-15862944 6 18 4592 FBgn0001105 5526.04 154.0466667 236.8166667 0.003257305 0.116847708 0.076008164 -3 -3 -3 0.1 dme-miR-308-3p 7mer-m1 TGTGATT X 15864781 15864787 + X_15864781_15864787_+ 0.521223855 0.521223855 0.521223855 0 Gbeta13F FBtr0074111|FBtr0074106|FBtr0346794|FBtr0074110|FBtr0331597|FBtr0074108 15862795|15862795|15862795|15862795|15862795|15862795 15866084|15866084|15866084|15866084|15866084|15866175 X + 15864698 15864809 3'utr Gbeta13F FlyBase G61796.1 TGTAATAAACTGATTGGTTTATTGACCTTCTTGAAGTATTCTTTAACGTTATAGTATCTTGGTCCGATAGGTAAATGGTAAATTGTGATTTAAAGTGAATAGTTTTTCAAGC 122 15864780 0.988532762 15 116 1074 0.963768116 1.646730386 0.282608696 0.123966942 0.231884058 121 3 2 133 X:15864698-15864809 7 Gbeta13F FBtr0074108|FBtr0331597|FBtr0074110|FBtr0346794|FBtr0074106|FBtr0074111 15862795|15862795|15862795|15862795|15862795|15862795 15866175|15866084|15866084|15866084|15866084|15866084 TGTGATT 7mer-m1 dme-miR-308-3p X + 15864760 15864803 3'utr Gbeta13F FlyBase G46666.1 TCCGATAGGTAAATGGTAAATTGTGATTTAAAGTGAATAGTTTT 80 15864780 0.653777165 6 80 661 1 2.045322979 0.297297297 0.325 0.513513514 80 0 0 111 X:15864760-15864803 7 97 4593 FBgn0001105 5526.04 154.0466667 236.8166667 0.017553257 0.629679318 0.40959955 1 1 1 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA X 15865087 15865093 + X_15865087_15865093_+ 0.76511751 0.77618312 0.770650315 0.007824561 Gbeta13F FBtr0074111|FBtr0074111|FBtr0074106|FBtr0074106|FBtr0346794|FBtr0346794|FBtr0074110|FBtr0074110|FBtr0331597|FBtr0331597|FBtr0074108|FBtr0074108 15862795|15862795|15862795|15862795|15862795|15862795|15862795|15862795|15862795|15862795|15862795|15862795 15866084|15866084|15866084|15866084|15866084|15866084|15866084|15866084|15866084|15866084|15866175|15866175 X + 15865041 15865150 3'utr Gbeta13F FlyBase G61798.2 AACAGCTGCAGTTATTTGGGCTCTGCTTTTTCGCCATAGATGGACTTACTTAATTTTAGTACATTCTGGACATTCTGGACGGCCATTTCAAAACTAATGCTGTTTCAAAA 149 15865081 0.907835736 12 148 1313 0.99408284 2.225309282 0.00591716 0.10738255 0.213017751 149 1 0 168 X:15865041-15865150 7 Gbeta13F FBtr0074108|FBtr0074108|FBtr0331597|FBtr0331597|FBtr0074110|FBtr0074110|FBtr0346794|FBtr0346794|FBtr0074106|FBtr0074106|FBtr0074111|FBtr0074111 15862795|15862795|15862795|15862795|15862795|15862795|15862795|15862795|15862795|15862795|15862795|15862795 15866175|15866175|15866084|15866084|15866084|15866084|15866084|15866084|15866084|15866084|15866084|15866084 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" X + 15865050 15865104 3'utr Gbeta13F FlyBase G46667.1 AGTTATTTGGGCTCTGCTTTTTCGCCATAGATGGACTTACTTAATTTTAGTACAT 102 15865081 0.980398955 6 97 837 0.967948718 1.400825697 0 0.352941176 0.576923077 102 0 5 151 X:15865050-15865104 7 120 4594 FBgn0001105 5526.04 154.0466667 236.8166667 0.021715369 0.778984723 0.506721092 6 6 6 0.1 dme-miR-14-3p 6mer3-8 AAGACT X 15876869 15876874 - X_15876869_15876874_- 0.999956761 0.999994883 0.999975822 2.69E-05 tay FBtr0074167|FBtr0310065|FBtr0310066|FBtr0340414 15876681|15876366|15876681|15876681 15877234|15877234|15877234|15877234 X - 15876727 15876936 3'utr tay FlyBase G67818.1 GATTACGATGCAGATGCAGATGCAGATGTTTGTGGCAAACAAAAATCAAATTAAAAGAGGTTAAGACTTCCTTATACTTCAGACCTAGCATTCAACCTAAGCACTGAGTCCCCACATTGGCAAAATACTTTCCTCGATCTTAATATGGTCGCGCGTTGAAACGTCACATAAGTAATACGAACTTTACTTATTTTTAATGAATACAAATTA 173 15876876 0.978391699 22 161 1163 0.9375 1.653212514 0.015625 0.098265896 0.1875 173 9 3 180 X:15876727-15876936 6 tay FBtr0310066|FBtr0340414|FBtr0074167|FBtr0310065 15876681|15876681|15876681|15876366 15877234|15877234|15877234|15877234 AAGACT 6mer3-8 dme-miR-14-3p X - 15876757 15876951 3'utr tay FlyBase G51051.1 ACAGATGAAGATGAAGATTACGATGCAGATGCAGATGCAGATGTTTGTGGCAAACAAAAATCAAATTAAAAGAGGTTAAGACTTCCTTATACTTCAGACCTAGCATTCAACCTAAGCACTGAGTCCCCACATTGGCAAAATACTTTCCTCGATCTTAATATGGTCGCGCGTTGAAACGTCACATAAGTAATACGA 97 15876876 0.979746413 21 93 643 0.959459459 2.152288344 0.040540541 0.371134021 0.587837838 97 6 0 142 X:15876757-15876951 6 92 4595 FBgn0260938 850.7 11.95 18.32333333 0.108146233 7.69874477 5.020920502 2 2 2 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 15887724 15887729 - X_15887724_15887729_- 0.562703245 0.465412063 0.514057654 0.068795197 MSBP FBtr0301598|FBtr0301598|FBtr0301598|FBtr0333719|FBtr0333719|FBtr0333719|FBtr0074166|FBtr0074166|FBtr0074166 15887565|15887565|15887565|15887565|15887565|15887565|15887565|15887565|15887565 15888035|15888035|15888035|15888035|15888035|15888035|15888035|15888035|15888035 X - 15887570 15887783 3'utr MSBP FlyBase G67853.1 CTTAGAGTGCAGCCTTGACAAAAGCTATAGTTGTTACTATAATTCACGTTGTGATGTGATCTTGTTCCATATATTATAGTCGTATATTCATACAAATGTAACAAACGGAAATCATAAAATTATTTAAGGAGGAGGCCAATGTGTGGAGGGTATGGGAGTCATTTTCGTGGCAATATAAATTTAAATGTAACTATATTTGAAATACAAATTAAAT 109 15887722 0.986928977 32 109 941 1 2.123851641 0.210526316 0.174311927 0.323308271 109 0 0 133 X:15887570-15887783 6 MSBP FBtr0301598|FBtr0301598|FBtr0301598|FBtr0333719|FBtr0333719|FBtr0333719|FBtr0074166|FBtr0074166|FBtr0074166 15887565|15887565|15887565|15887565|15887565|15887565|15887565|15887565|15887565 15888035|15888035|15888035|15888035|15888035|15888035|15888035|15888035|15888035 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 15887693 15887769 3'utr MSBP FlyBase G51080.1 TTGACAAAAGCTATAGTTGTTACTATAATTCACGTTGTGATGTGATCTTGTTCCATATATTATAGTCGTATATTCAT 55 15887722 0.991410554 12 50 541 0.931818182 1.436692598 0.125 0.454545455 0.659090909 55 4 2 82 X:15887693-15887769 6 60.5 4596 FBgn0030703 1227.653333 105.4533333 161.41 0.049281013 0.573713491 0.374821882 -7 -7 -7 0.1 dme-bantam-3p 6mer3-8 TGATCT X 15904409 15904414 + X_15904409_15904414_+ 0.999989899 0.999958483 0.999974191 2.22E-05 shi FBtr0074119|FBtr0301597|FBtr0111037|FBtr0074122|FBtr0074118|FBtr0333718|FBtr0111036|FBtr0074121 15903798|15903798|15903798|15903798|15903798|15903798|15903798|15903798 15905068|15905068|15905068|15905068|15905068|15905667|15905068|15905068 X + 15904315 15904489 3'utr shi FlyBase G61854.1 CCTCCCCTAACTCTCCACACATTATCAACGGCATACGCTCAAAAGTTATGTAAACTATTTGTATGGGCAGATGCTTAGTGACGATATTAACCAATGATCTTAATTATATAGCTAACTATTAATAAATAGCTTTCGTTAACTGCATTGTGTTGTTGTTGATGTTAAACTATAAAAA 167 15904409 0.987375016 20 161 1424 0.971428571 2.008600172 0.071428571 0.203592814 0.366666667 167 5 1 204 X:15904315-15904489 6 shi FBtr0074118|FBtr0111036|FBtr0074121|FBtr0333718|FBtr0301597|FBtr0074122|FBtr0074119|FBtr0111037 15903798|15903798|15903798|15903798|15903798|15903798|15903798|15903798 15905068|15905068|15905068|15905667|15905068|15905068|15905068|15905068 TGATCT 6mer3-8 dme-bantam-3p X + 15904324 15904476 3'utr shi FlyBase G46713.1 ACTCTCCACACATTATCAACGGCATACGCTCAAAAGTTATGTAAACTATTTGTATGGGCAGATGCTTAGTGACGATATTAACCAATGATCTTAATTATATAGCTAACTATTAATAAATAGCTTTCGTTAACTGCATTGTGTTGTTGTTGATGT 96 15904409 0.929642359 18 94 789 0.98630137 1.857332496 0.04109589 0.364583333 0.582191781 96 1 1 144 X:15904324-15904476 6 110 4597 FBgn0003392 1552.753333 51.10333333 78.22666667 0.070841902 2.152501468 1.406170104 0 0 0 0.1 dme-bantam-3p 6mer3-8 TGATCT X 15906135 15906140 + X_15906135_15906140_+ 1 0.999999948 0.999999974 7.07E-08 shi FBtr0333717|FBtr0340413|FBtr0301594|FBtr0301596|FBtr0074123|FBtr0301595|FBtr0074124 15905923|15905923|15905923|15905923|15905923|15905923|15905923 15906716|15906716|15906252|15906252|15906252|15906252|15906252 X + 15906118 15906154 3'utr shi FlyBase G61863.1 AAAAAGTGTTTTACACATGATCTTTTGGACAATTCAA 11 15906135 0.887108386 3 11 108 1 1.041392685 0.636363636 0 0 11 0 0 11 X:15906118-15906154 6 shi FBtr0074123|FBtr0301595|FBtr0340413|FBtr0074124|FBtr0301594|FBtr0301596|FBtr0333717 15905923|15905923|15905923|15905923|15905923|15905923|15905923 15906252|15906252|15906716|15906252|15906252|15906252|15906716 TGATCT 6mer3-8 dme-bantam-3p X + 15906120 15906225 3'utr shi FlyBase G46719.1 AAAGTGTTTTACACATGATCTTTTGGACAATTCAACATTCAAATTAGTGCTTTCGAATTAAGTTTATCGGGGATACCATTTACTTTTTAAAGTATATTTGAACGTG 9 15906135 0.988686838 7 9 84 1 1 0.3 0.111111111 0.2 9 0 0 10 X:15906120-15906225 6 7.5 4598 FBgn0003392 1552.753333 51.10333333 78.22666667 0.00483013 0.146761464 0.095875234 0 0 0 0.1 dme-miR-14-3p 7mer-A1 AGACTGA X 15907012 15907018 - X_15907012_15907018_- 0.798160673 0.791363609 0.794762141 0.004806276 CycD FBtr0300391|FBtr0300393|FBtr0300392 15906820|15906820|15906820 15907273|15907273|15907273 X - 15906856 15907056 3'utr CycD FlyBase G67863.2 TCATCATGAAACTTTGAAATGGATGAAACATAAAAACGAGACTGATTGTAAGCAGCAAAGCAACATTTTTTTTTTGTATATAAGCTTTTCGAAATCCTACACAGATAACCAAAAAAGAACGAACTATTAAATGCAATTTTTTTAAAAACCATCCAACATAAAGAGAAAAACAATATGTTAAAGTTAACTTTGGATAACAAT 211 15907011 0.951679565 23 203 967 0.968992248 2.397940009 0.085271318 0.18957346 0.337209302 211 8 0 250 X:15906856-15907056 7 CycD FBtr0300391|FBtr0300393|FBtr0300392 15906820|15906820|15906820 15907273|15907273|15907273 AGACTGA 7mer-A1 dme-miR-14-3p X - 15906993 15907073 3'utr CycD FlyBase G51089.1 AAAATAGTTTTAAATAATCATCATGAAACTTTGAAATGGATGAAACATAAAAACGAGACTGATTGTAAGCAGCAAAGCAAC 137 15907011 0.952073167 9 131 585 0.96097561 2.294466226 0.141463415 0.386861314 0.590243902 137 8 0 197 X:15906993-15907073 7 151 4599 FBgn0010315 578 31.73666667 48.65333333 0.261245675 4.757903582 3.103590025 -7 -7 -7 0.1 dme-miR-1003-3p 7mer-A1 TGTGAGA X 15935696 15935702 - X_15935696_15935702_- 0.823262693 0.823014315 0.823138504 0.000175645 Stim FBtr0308705 15934899 15938324 X - 15935676 15935723 5'utr Stim FlyBase G67900.1 CTACAGTCGGCCAGAGAGGCTTGTGAGAAATTGCGTAAGAAACGGTCA 11 15935702 0.950522658 6 9 40 0.818181818 0.954242509 0.090909091 0 0 11 2 0 9 X:15935676-15935723 7 Stim FBtr0308705 15934899 15938324 TGTGAGA 7mer-A1 dme-miR-1003-3p X - 15935696 15935725 5'utr Stim FlyBase G51116.1 AGCTACAGTCGGCCAGAGAGGCTTGTGAGA 8 15935702 0.621104993 2 8 26 1 1.041392685 0.090909091 0.375 0.545454545 8 0 0 11 X:15935696-15935725 6 9.5 4600 FBgn0045073 1420.51 79.57666667 121.2 0.006687739 0.119381728 0.078382838 0 0 0 0.1 dme-miR-282-5p 7mer-A1 GAGGCTA X 15937659 15937665 - X_15937659_15937665_- 0.823303143 0.823345001 0.823324072 2.96E-05 Stim FBtr0308705 15934899 15938324 X - 15937638 15937684 5'utr Stim FlyBase G67907.1 TCAGGATCGCTTTGGCATGGAGGCTATTGCCAGCTTGCATCGTCAGC 15 15937667 0.935609347 2 13 102 0.947368421 1.255272505 0.105263158 0.2 0.368421053 15 1 0 18 X:15937638-15937684 7 Stim FBtr0308705 15934899 15938324 GAGGCTA 7mer-A1 dme-miR-282-5p X - 15937640 15937683 5'utr Stim FlyBase G51118.1 CAGGATCGCTTTGGCATGGAGGCTATTGCCAGCTTGCATCGTCA 7 15937667 0.978262545 2 7 48 1 1.146128036 0.357142857 0.857142857 0.928571429 7 0 0 14 X:15937640-15937683 7 9 4601 FBgn0045073 1420.51 79.57666667 121.2 0.006335753 0.113098479 0.074257426 2 2 2 0.1 dme-miR-965-3p 7mer-m8 TACGCTT X 15944222 15944228 + X_15944222_15944228_+ 0.617825841 0.620187098 0.619006469 0.001669691 CG8924 FBtr0074130 15944054 15944449 X + 15944203 15944279 3'utr CG8924 FlyBase G61872.1 ATACATAGGTTTACTTAATTACGCTTTGGAGATGCCACAGTTTTATCCTTGGTTGAAAAACTCTTGCCGTTCAATCA 38 15944221 0.833567663 6 36 342 0.954545455 1.62324929 0.431818182 0.131578947 0.25 38 2 0 42 X:15944203-15944279 7 CG8924 FBtr0074130 15944054 15944449 TACGCTT 7mer-m8 dme-miR-965-3p X + 15944203 15944243 3'utr CG8924 FlyBase G46725.1 ATACATAGGTTTACTTAATTACGCTTTGGAGATGCCACAGT 27 15944221 0.658914449 5 26 259 0.955555556 1.633468456 0.577777778 0.407407407 0.644444444 27 2 0 43 X:15944203-15944243 7 29.5 4602 FBgn0030710 226.3333333 10.62 16.19333333 0.130338733 2.777777778 1.82173734 1 1 1 0.1 dme-miR-1012-3p 7mer-A1 TGACTAA X 15944343 15944349 + X_15944343_15944349_+ 0.775832416 0.823345818 0.799589117 0.033597047 CG8924 FBtr0074130 15944054 15944449 X + 15944320 15944393 3'utr CG8924 FlyBase G61873.1 ATGTATGCTATCAACAAGGATTATGACTAAAAACTTGCGTAAAAATTTCAATTATGTTTCTTGTCGCCCCAGTA 8 15944354 0.970474836 5 8 54 1 0.903089987 0 0 0 8 0 0 8 X:15944320-15944393 7 CG8924 FBtr0074130 15944054 15944449 TGACTAA 7mer-A1 dme-miR-1012-3p X + 15944325 15944360 3'utr CG8924 FlyBase G46726.1 TGCTATCAACAAGGATTATGACTAAAAACTTGCGTA 5 15944341 0.959969129 3 5 25 1 0.954242509 0.111111111 0.4 0.666666667 5 0 0 9 X:15944325-15944360 7 5.5 4603 FBgn0030710 226.3333333 10.62 16.19333333 0.024300442 0.517890772 0.339645945 -11 2 -4.5 0.1 dme-miR-79-3p 6mer2-7 AGCTTT X 15995132 15995137 + X_15995132_15995137_+ 0.999880523 0.999884634 0.999882578 2.90E-06 exd FBtr0074137|FBtr0333322|FBtr0074135|FBtr0333323 15994971|15994971|15994971|15994971 15995996|15996509|15995996|15996509 X + 15995058 15995160 3'utr exd FlyBase G61892.1 AGTTTTTTCATAATTATGCGGCTTATATTTGCTTCTTCGCCAAGAACAACAATTCTTAAGGGATTTTTAAATTCAGCTTTCTGTCCTTTGGTTTCGAGTCAGA 42 15995136 0.97312565 14 37 397 0.910714286 1.40654018 0.267857143 0.214285714 0.410714286 42 4 1 51 X:15995058-15995160 6 exd FBtr0074135|FBtr0333323|FBtr0074137|FBtr0333322 15994971|15994971|15994971|15994971 15995996|15996509|15995996|15996509 AGCTTT 6mer2-7 dme-miR-79-3p X + 15995044 15995161 3'utr exd FlyBase G46740.1 AAAATCTAACATGCAGTTTTTTCATAATTATGCGGCTTATATTTGCTTCTTCGCCAAGAACAACAATTCTTAAGGGATTTTTAAATTCAGCTTTCTGTCCTTTGGTTTCGAGTCAGAT 28 15995136 0.993066792 11 23 279 0.88372093 1.579783597 0.162790698 0.321428571 0.558139535 28 5 0 38 X:15995044-15995161 6 20 4604 FBgn0000611 1497 64.64333333 99.30333333 0.013360053 0.309389986 0.201403108 -4 -4 -4 0.1 dme-miR-79-3p 6mer2-7 AGCTTT X 16078050 16078055 - X_16078050_16078055_- 0.999887672 0.999880557 0.999884115 5.02E-06 Tob FBtr0301652|FBtr0310446 16074715|16077885 16079819|16079819 X - 16078037 16078074 5'utr Tob FlyBase G67976.1 AAGTTATTCAAGCTATGGAAGCTTTTACATATAAAAAC 13 16078059 0.850336211 2 12 104 0.888888889 1.204119983 0.055555556 0.307692308 0.5 13 2 0 16 X:16078037-16078074 6 Tob FBtr0310446|FBtr0301652 16077885|16074715 16079819|16079819 AGCTTT 6mer2-7 dme-miR-79-3p X - 16078036 16078074 5'utr Tob FlyBase G51168.1 AAGTTATTCAAGCTATGGAAGCTTTTACATATAAAAACA 8 16078059 0.975258079 2 8 62 1 0.954242509 0 0.125 0.222222222 8 0 0 9 X:16078036-16078074 6 10.5 4605 FBgn0028397 630.16 18.44 28.35666667 0.016662435 0.569414317 0.370283296 4 4 4 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 16093289 16093295 - X_16093289_16093295_- 0.801968754 0.801970067 0.80196941 9.19E-07 CG42354 FBtr0299950|FBtr0299950|FBtr0299950|FBtr0310316|FBtr0310316|FBtr0310316|FBtr0299951|FBtr0299951|FBtr0299951|FBtr0310314|FBtr0310314|FBtr0310314|FBtr0310315|FBtr0310315|FBtr0310315|FBtr0299949|FBtr0299949|FBtr0299949 16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057 16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102 X - 16093272 16093305 3'utr CG42354 FlyBase G67989.1 TATATATATTTGTGATACCTATACTAATATTTTT 82 16093297 0.723195785 5 73 863 0.894736842 1.452297671 0 0.134146341 0.252631579 82 8 2 85 X:16093272-16093305 7 CG42354 FBtr0310316|FBtr0310316|FBtr0310316|FBtr0299950|FBtr0299950|FBtr0299950|FBtr0299949|FBtr0299949|FBtr0299949|FBtr0310315|FBtr0310315|FBtr0310315|FBtr0310314|FBtr0310314|FBtr0310314|FBtr0299951|FBtr0299951|FBtr0299951 16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057 16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 16093273 16093305 3'utr CG42354 FlyBase G51174.1 TATATATATTTGTGATACCTATACTAATATTTT 49 16093297 0.699319491 7 44 496 0.880597015 1.469822016 0 0.326530612 0.507462687 49 7 1 59 X:16093273-16093305 7 65.5 4606 FBgn0259700 906.0733333 39.32 60.44666667 0.072289954 1.665818922 1.083599868 2 2 2 0.1 dme-miR-276a-3p 7mer-A1 GTTCCTA X 16093917 16093923 - X_16093917_16093923_- 0.820105947 0.81906032 0.819583134 0.000739351 CG42354 FBtr0299950|FBtr0310316|FBtr0299951|FBtr0310314|FBtr0310315|FBtr0299949 16093057|16093057|16093057|16093057|16093057|16093057 16094102|16094102|16094102|16094102|16094102|16094102 X - 16093900 16094015 3'utr CG42354 FlyBase G67994.1 CGCAACAGAGGTCACATATACATATATACTTTAATCCCAAGATATACTTAAGGACAGAGTGTGCTAGTAAAGCGCACACCGAATTTGCGCTGGTTCCTAACTTATACATGTGTGTG 40 16093926 0.934980454 13 40 215 1 1.672097858 0.063829787 0.15 0.276595745 40 0 0 47 X:16093900-16094015 7 CG42354 FBtr0310316|FBtr0299950|FBtr0299949|FBtr0310315|FBtr0310314|FBtr0299951 16093057|16093057|16093057|16093057|16093057|16093057 16094102|16094102|16094102|16094102|16094102|16094102 GTTCCTA 7mer-A1 dme-miR-276a-3p X - 16093889 16093998 3'utr CG42354 FlyBase G51179.1 ATACATATATACTTTAATCCCAAGATATACTTAAGGACAGAGTGTGCTAGTAAAGCGCACACCGAATTTGCGCTGGTTCCTAACTTATACATGTGTGTGTTTGTAATATT 22 16093926 0.975771596 10 20 128 0.96875 1.491361694 0.15625 0.318181818 0.53125 22 1 0 31 X:16093889-16093998 7 11.5 4607 FBgn0259700 906.0733333 39.32 60.44666667 0.012692129 0.292472024 0.190250358 3 3 3 0.1 dme-bantam-3p 6mer3-8 TGATCT X 16277537 16277542 + X_16277537_16277542_+ 0.99999917 1 0.999999585 5.66E-07 Prosalpha4 FBtr0074210 16277308 16277587 X + 16277487 16277553 3'utr Prosalpha4 FlyBase G61937.1 AATTACCACTTTCTATTCTTCGGAACCCTGTAAAACGGTATGAAAATATTTGATCTGTATAAAATAC 18 16277537 0.691296933 8 17 141 0.952380952 1.301029996 0.19047619 0.111111111 0.238095238 18 1 0 20 X:16277487-16277553 6 Prosalpha4 FBtr0074210 16277308 16277587 TGATCT 6mer3-8 dme-bantam-3p X + 16277523 16277551 3'utr Prosalpha4 FlyBase G46771.1 GGTATGAAAATATTTGATCTGTATAAAAT 6 16277536 0.720683801 2 5 51 0.9 0.954242509 0.1 0.5 0.7 6 1 0 9 X:16277523-16277551 6 8 4608 FBgn0004066 1281.22 133.8966667 204.6 0.006244049 0.059747567 0.039100684 0 1 0.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA X 16284201 16284208 + X_16284201_16284208_+ 0.674982062 0.674982054 0.674982058 0 eas FBtr0308617|FBtr0343520|FBtr0308618 16283732|16283732|16283732 16285618|16285618|16285618 X + 16284146 16284226 3'utr eas FlyBase G61942.1 GGCGACCAAACCCATGCCGATGATTTGGAAGAAGACGCAGAGCTTTCTTGATTTAGTACCTGAACGTTTTAGTGATGCTGA 23 16284198 0.98959922 11 22 208 0.931034483 1.431363764 0.172413793 0.260869565 0.413793103 23 2 0 27 X:16284146-16284226 8 eas FBtr0308618|FBtr0343520|FBtr0308617 16283732|16283732|16283732 16285618|16285618|16285618 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" X + 16284156 16284225 3'utr eas FlyBase G46774.1 CCCATGCCGATGATTTGGAAGAAGACGCAGAGCTTTCTTGATTTAGTACCTGAACGTTTTAGTGATGCTG 9 16284198 0.989194274 7 8 75 0.857142857 1.079181246 0.357142857 0.444444444 0.642857143 9 2 0 12 X:16284156-16284225 8 13 4609 FBgn0000536 1202.386667 57.26666667 87.69666667 0.01081183 0.227008149 0.148238245 3 3 3 0.1 dme-bantam-3p 6mer3-8 TGATCT X 16284434 16284439 + X_16284434_16284439_+ 0.976971937 0.985096583 0.98103426 0.00574503 eas FBtr0308617|FBtr0343520|FBtr0308618 16283732|16283732|16283732 16285618|16285618|16285618 X + 16284374 16284475 3'utr eas FlyBase G61943.1 ACCTCGAGGCTCTGGACAGTCCGATTGTCTTCTCCCACAACGATCTTCTGCTGGGAAATGTGATCTATACGCAGAGCCTGAATACGGTGAACTTCATCGACT 17 16284440 0.977931239 7 15 104 0.894736842 1.230448921 0.315789474 0.117647059 0.210526316 17 2 0 17 X:16284374-16284475 6 eas FBtr0308618|FBtr0343520|FBtr0308617 16283732|16283732|16283732 16285618|16285618|16285618 TGATCT 6mer3-8 dme-bantam-3p X + 16284369 16284457 3'utr eas FlyBase G46775.1 TGAATACCTCGAGGCTCTGGACAGTCCGATTGTCTTCTCCCACAACGATCTTCTGCTGGGAAATGTGATCTATACGCAGAGCCTGAATA 20 16284440 0.953240683 9 17 96 0.892857143 1.096910013 0.25 0.368421053 0.571428571 19 2 1 25 X:16284369-16284457 6 11 4610 FBgn0000536 1202.386667 57.26666667 87.69666667 0.009148471 0.192083818 0.125432362 -6 -6 -6 0.1 dme-miR-318-3p 8mer-A1 CCCAGTGA X 16285152 16285159 + X_16285152_16285159_+ 0.424897014 0.667792394 0.546344704 0.171752984 eas FBtr0308617|FBtr0343519|FBtr0074212|FBtr0343520|FBtr0308618|FBtr0074214|FBtr0074211|FBtr0308619 16283732|16285102|16285102|16283732|16283732|16285102|16285102|16285102 16285618|16285618|16285618|16285618|16285618|16285618|16285618|16285618 X + 16285146 16285196 3'utr eas FlyBase G61945.1 TATGTGCCCAGTGATATATGTATAAACTAAGGCTGGAACGGGTCTCAATGT 22 16285169 0.765860597 6 14 135 0.615384615 0.903089987 0.423076923 0.090909091 0.230769231 22 9 1 16 X:16285146-16285196 8 eas FBtr0074211|FBtr0308619|FBtr0308618|FBtr0074214|FBtr0074212|FBtr0343520|FBtr0308617|FBtr0343519 16285102|16285102|16283732|16285102|16285102|16283732|16283732|16285102 16285618|16285618|16285618|16285618|16285618|16285618|16285618|16285618 CCCAGTGA 8mer-A1 dme-miR-318-3p X + 16285144 16285206 3'utr eas FlyBase G46777.1 ATTATGTGCCCAGTGATATATGTATAAACTAAGGCTGGAACGGGTCTCAATGTTATACATATG 19 16285172 0.811143602 8 16 106 0.827586207 0.77815125 0.551724138 0.473684211 0.655172414 19 2 3 24 X:16285144-16285206 8 7 4611 FBgn0000536 1202.386667 57.26666667 87.69666667 0.005821755 0.122235157 0.079820594 -17 -20 -18.5 0.1 dme-miR-305-5p 6mer2-7 GTACAA X 16292230 16292235 + X_16292230_16292235_+ 0.924433323 0.887209857 0.90582159 0.026320919 caz FBtr0334992 16292078 16293520 X + 16292194 16292253 3'utr caz FlyBase G61963.1 GAAAGACAAGCGTACAATGAAGCCCAAGATTTGGCTGTACAAGAACAAGGAGACCGGCGC 23 16292225 0.941662042 4 23 92 1 1.431363764 0.296296296 0.130434783 0.259259259 23 0 0 27 X:16292194-16292253 6 caz FBtr0334992 16292078 16293520 GTACAA 6mer2-7 dme-miR-305-5p X + 16292194 16292239 3'utr caz FlyBase G46787.1 GAAAGACAAGCGTACAATGAAGCCCAAGATTTGGCTGTACAAGAAC 13 16292224 0.9313284 4 13 49 1 1.278753601 0.157894737 0.307692308 0.526315789 13 0 0 19 X:16292194-16292239 6 14.5 4612 FBgn0011571 288.6766667 20.94333333 31.84666667 0.050229207 0.692344421 0.455306678 5 6 5.5 0.1 dme-miR-965-3p 7mer-m8 TACGCTT X 16293262 16293268 + X_16293262_16293268_+ 0.619603982 0.620188026 0.619896004 0.00041295 caz FBtr0334992|FBtr0334990|FBtr0334991|FBtr0074217 16292078|16293194|16293194|16293194 16293520|16293520|16293520|16293520 X + 16293162 16293336 stop_codon caz FlyBase G61967.1 AAACGATGGAGGCATGCGCTCGAGACCATATTAAGCGCATGGTAGCCAGCCGAACGCGGCACCTATTTTTTTCACTTTTACTTATTAATTGTAGCGAGAGTACGCTTTTAAATGTACTTTTAAAATTAACAGTCAGAGCAACTTTTAAATGATAATTGCCAGCACACGACTTCAT 71 16293269 0.985598263 25 68 552 0.966292135 1.633468456 0.337078652 0.183098592 0.348314607 71 2 1 86 X:16293162-16293336 7 caz FBtr0334991|FBtr0074217|FBtr0334992|FBtr0334990 16293194|16293194|16292078|16293194 16293520|16293520|16293520|16293520 TACGCTT 7mer-m8 dme-miR-965-3p X + 16293228 16293309 3'utr caz FlyBase G46789.1 TTTTTTCACTTTTACTTATTAATTGTAGCGAGAGTACGCTTTTAAATGTACTTTTAAAATTAACAGTCAGAGCAACTTTTAA 42 16293269 0.985810615 13 41 341 0.983870968 1.785329835 0.290322581 0.404761905 0.596774194 42 1 0 61 X:16293228-16293309 7 38 4613 FBgn0011571 288.6766667 20.94333333 31.84666667 0.131635163 1.814419863 1.193217501 -7 -7 -7 0.1 dme-miR-1012-3p 6mer3-8 TTGACT X 16293381 16293386 + X_16293381_16293386_+ 0.992384829 0.991240529 0.991812679 0.000809142 caz FBtr0334992|FBtr0334990|FBtr0334991|FBtr0074217 16292078|16293194|16293194|16293194 16293520|16293520|16293520|16293520 X + 16293365 16293492 3'utr caz FlyBase G61968.1 ACGGTTATCGCTCGTTTTGACTGAATTATATTATATAATTATGTAATCTAATTTAACAACTGTAACTGTAACATGGTACATACGAATAAACATATATATATGTATACATATATAGCTCATATATATGT 37 16293381 0.907989108 18 33 335 0.857142857 1.322219295 0.06122449 0.243243243 0.428571429 37 6 1 42 X:16293365-16293492 6 caz FBtr0334991|FBtr0074217|FBtr0334992|FBtr0334990 16293194|16293194|16292078|16293194 16293520|16293520|16293520|16293520 TTGACT 6mer3-8 dme-miR-1012-3p X + 16293360 16293492 3'utr caz FlyBase G46790.1 CACACACGGTTATCGCTCGTTTTGACTGAATTATATTATATAATTATGTAATCTAATTTAACAACTGTAACTGTAACATGGTACATACGAATAAACATATATATATGTATACATATATAGCTCATATATATGT 32 16293381 0.770261156 16 28 320 0.905660377 1.681241237 0 0.40625 0.641509434 32 5 0 48 X:16293360-16293492 6 20.5 4614 FBgn0011571 288.6766667 20.94333333 31.84666667 0.071013706 0.978831768 0.643709441 0 0 0 0.1 dme-miR-318-3p 6mer3-8 CCCAGT X 16302979 16302984 + X_16302979_16302984_+ 0.999999986 0.999999851 0.999999919 7.07E-08 CG3632 FBtr0344216 16302932 16303308 X + 16302969 16303007 3'utr CG3632 FlyBase G61999.1 AGCTTTTTAACCCAGTTAGGCTATGTGGATCCTGCTACA 11 16302985 0.763209204 4 11 92 1 1.079181246 0.166666667 0.090909091 0.166666667 11 0 0 12 X:16302969-16303007 6 CG3632 FBtr0344216 16302932 16303308 CCCAGT 6mer3-8 dme-miR-318-3p X + 16302960 16303005 3'utr CG3632 FlyBase G46814.1 CAAACGAAAAGCTTTTTAACCCAGTTAGGCTATGTGGATCCTGCTA 9 16302993 0.974970901 5 9 60 1 1.079181246 0 0.222222222 0.416666667 9 0 0 12 X:16302960-16303005 6 9 4615 FBgn0030735 647.8533333 19.21 29.39333333 0.013892033 0.468505986 0.30619188 -6 -14 -10 0.1 dme-miR-7-5p 6mer3-8 GTCTTC X 16303078 16303083 + X_16303078_16303083_+ 0.999997101 0.999999067 0.999998084 1.41E-06 CG3632 FBtr0344216 16302932 16303308 X + 16303059 16303096 stop_codon CG3632 FlyBase G62000.1 AGGCGAAGGACGATGAGACGTCTTCTGCGATTTCCTAA 43 16303082 0.93661744 5 42 285 0.980769231 1.707570176 0 0.209302326 0.346153846 43 1 0 51 X:16303059-16303096 6 CG3632 FBtr0344216 16302932 16303308 GTCTTC 6mer3-8 dme-miR-7-5p X + 16303028 16303094 stop_codon CG3632 FlyBase G46815.1 CAGGAGTACGCTGCGGTACCTGCAGAATCCCAGGCGAAGGACGATGAGACGTCTTCTGCGATTTCCT 14 16303082 0.977404326 4 14 90 1 1.414973348 0.153846154 0.571428571 0.769230769 14 0 0 26 X:16303028-16303094 6 27 4616 FBgn0030735 647.8533333 19.21 29.39333333 0.0416761 1.405517959 0.918575641 -4 -4 -4 0.1 dme-miR-965-3p 6mer3-8 TACGCT X 16317729 16317734 - X_16317729_16317734_- 0.762289484 0.999123144 0.880706314 0.167466645 Cyp1 FBtr0074238 16317671 16318181 X - 16317690 16317740 3'utr Cyp1 FlyBase G68037.1 ACGTTCTACGCTATGTACCGGAATCGGAATTGTATTTTCGTCTTAATAAAT 20 16317727 0.79133648 6 19 154 0.96 1.380211242 0.16 0.25 0.4 20 1 0 24 X:16317690-16317740 6 Cyp1 FBtr0074238 16317671 16318181 TACGCT 6mer3-8 dme-miR-965-3p X - 16317699 16317741 3'utr Cyp1 FlyBase G51207.1 AACGTTCTACGCTATGTACCGGAATCGGAATTGTATTTTCGTC 7 16317727 0.961598982 4 6 47 0.875 0.84509804 0.25 0.142857143 0.25 7 1 0 7 X:16317699-16317741 6 9.5 4617 FBgn0004432 7157.433333 716.86 1097.683333 0.001327291 0.013252239 0.008654591 -7 -7 -7 0.1 dme-bantam-3p 6mer3-8 TGATCT X 16317820 16317825 - X_16317820_16317825_- 0.999642019 0.999991286 0.999816652 0.000246992 Cyp1 FBtr0074238 16317671 16318181 X - 16317798 16317874 3'utr Cyp1 FlyBase G68038.1 AAGAAAAACAATGAGACGACAAGAGTCGAGAGGGGCTTAGAAAAATGTTTGATCTTTTGATGTTGGCTTACTTACTA 37 16317826 0.999985575 10 36 351 0.978723404 1.662757832 0.14893617 0.243243243 0.404255319 37 1 0 46 X:16317798-16317874 6 Cyp1 FBtr0074238 16317671 16318181 TGATCT 6mer3-8 dme-bantam-3p X - 16317802 16317876 3'utr Cyp1 FlyBase G51208.1 AGAAGAAAAACAATGAGACGACAAGAGTCGAGAGGGGCTTAGAAAAATGTTTGATCTTTTGATGTTGGCTTACTT 29 16317819 0.987721101 9 27 250 0.934782609 1.156347201 0.239130435 0.379310345 0.608695652 29 1 2 43 X:16317802-16317876 6 27 4618 FBgn0004432 7157.433333 716.86 1097.683333 0.003772302 0.037664258 0.024597258 1 -6 -2.5 0.1 dme-miR-277-3p 7mer-m8 TGCATTT X 16318110 16318116 - X_16318110_16318116_- 0.620204178 0.620204266 0.620204222 7.07E-08 Cyp1 FBtr0074238 16317671 16318181 X - 16318100 16318162 3'utr Cyp1 FlyBase G68041.1 AACAGCAACATTGCAAGAAGAAAAATCTGTTAAGACGAAAACCATTTGCATTTTCTCCAAAAC 26 16318117 0.850893062 8 24 139 0.9375 1.477121255 0.125 0.192307692 0.34375 26 2 0 30 X:16318100-16318162 7 Cyp1 FBtr0074238 16317671 16318181 TGCATTT 7mer-m8 dme-miR-277-3p X - 16318100 16318159 3'utr Cyp1 FlyBase G51210.1 AGCAACATTGCAAGAAGAAAAATCTGTTAAGACGAAAACCATTTGCATTTTCTCCAAAAC 19 16318116 0.80387963 8 18 109 0.958333333 1.361727836 0.041666667 0.263157895 0.416666667 19 1 0 23 X:16318100-16318159 7 15 4619 FBgn0004432 7157.433333 716.86 1097.683333 0.002095723 0.020924588 0.013665143 1 0 0.5 0.1 dme-miR-184-5p 6mer3-8 TGATAA X 16321441 16321446 - X_16321441_16321446_- 0.999998275 0.999999936 0.999999106 1.13E-06 CG9917 FBtr0331756|FBtr0074237 16321429|16321429 16322047|16322047 X - 16321430 16321464 3'utr CG9917 FlyBase G68047.1 ATTATTGTAATAATAAAGTGATAAATGTAAAAAGA 20 16321452 0.759737074 6 17 145 0.869565217 1 0.043478261 0.15 0.260869565 20 2 1 20 X:16321430-16321464 6 CG9917 FBtr0331756|FBtr0074237 16321429|16321429 16322047|16322047 TGATAA 6mer3-8 dme-miR-184-5p X - 16321433 16321462 3'utr CG9917 FlyBase G51218.1 TATTGTAATAATAAAGTGATAAATGTAAAA 14 16321452 0.713158982 7 13 87 0.952380952 1.301029996 0 0.357142857 0.571428571 14 1 0 20 X:16321433-16321462 6 16 4620 FBgn0030740 1612.983333 110.1633333 169.58 0.009919507 0.145238888 0.094350749 6 6 6 0.1 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT X 16321797 16321803 - X_16321797_16321803_- 0.620203994 0.62020403 0.620204012 0 CG9917 FBtr0331756|FBtr0074237 16321429|16321429 16322047|16322047 X - 16321741 16321830 3'utr CG9917 FlyBase G68048.3 AGGCTAGCCAGCCATATCGTTTTTGTTTGGTGCTTCTAATTTATGTAATTAATTGCCAATTGATGTATGTATGTATGTAGTATTGTAAAC 48 16321804 0.81168328 13 47 592 1 1.770852012 0.169491525 0.166666667 0.322033898 48 0 0 59 X:16321741-16321830 7 CG9917 FBtr0331756|FBtr0074237 16321429|16321429 16322047|16322047 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" X - 16321655 16321831 3'utr CG9917 FlyBase G51220.1 CAGGCTAGCCAGCCATATCGTTTTTGTTTGGTGCTTCTAATTTATGTAATTAATTGCCAATTGATGTATGTATGTATGTAGTATTGTAAACAATGCTTATACTTCCTTCTAGTTTTACTTCTGAATCAGAAATTCTTCTGGCCTTTGTCATGCGTTTATCTAATGCTTTATTTCCGT 49 16321804 0.994765471 14 43 591 0.926470588 1.799340549 0.235294118 0.285714286 0.485294118 49 5 0 63 X:16321655-16321831 7 35.5 4621 FBgn0030740 1612.983333 110.1633333 169.58 0.022008907 0.322248782 0.209340724 1 1 1 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA X 16328165 16328170 + X_16328165_16328170_+ 0.608462103 0.567868705 0.588165404 0.028703868 CalpC FBtr0074226 16328052 16328523 X + 16328136 16328187 3'utr CalpC FlyBase G62011.1 GACGACGACGACGATGATGCAGCTGATGTTGATGATGCTGATCTGCCAATCA 20 16328168 0.97514666 4 20 132 1 1.322219295 0.238095238 0.05 0.095238095 20 0 0 21 X:16328136-16328187 6 CalpC FBtr0074226 16328052 16328523 TGATGA 6mer3-8 dme-miR-2a-2-5p X + 16328136 16328191 3'utr CalpC FlyBase G46826.1 GACGACGACGACGATGATGCAGCTGATGTTGATGATGCTGATCTGCCAATCAAAAA 15 16328169 0.974332217 4 14 89 0.947368421 1.255272505 0.263157895 0.266666667 0.421052632 15 1 0 18 X:16328136-16328191 6 12.5 4622 FBgn0260450 208 9.383333333 14.38333333 0.060096154 1.332149201 0.869061414 -3 -4 -3.5 0.1 dme-miR-968-5p 6mer3-8 ACTACT X 16328437 16328442 + X_16328437_16328442_+ 0.999599339 0.999654202 0.999626771 3.88E-05 CalpC FBtr0074226 16328052 16328523 X + 16328386 16328450 3'utr CalpC FlyBase G62012.1 AATATATATAGAATCGAGCGAAATGGCCAATGCGATTGCAGACTTTTATGTACTACTGAGAATTT 130 16328434 0.985219418 7 130 1056 1 2.190331698 0.458064516 0.161538462 0.296774194 130 0 0 155 X:16328386-16328450 6 CalpC FBtr0074226 16328052 16328523 ACTACT 6mer3-8 dme-miR-968-5p X + 16328414 16328457 3'utr CalpC FlyBase G46827.1 AATGCGATTGCAGACTTTTATGTACTACTGAGAATTTTTATTAT 85 16328434 0.698210974 4 85 675 1 2.127104798 0.485074627 0.435294118 0.641791045 85 0 0 134 X:16328414-16328457 6 106.5 4623 FBgn0260450 208 9.383333333 14.38333333 0.512019231 11.34991119 7.404403244 3 3 3 0.1 dme-miR-12-5p 7mer-m8 AATACTC X 16337819 16337825 + X_16337819_16337825_+ 0.674510423 0.674515029 0.674512726 3.25E-06 Dsp1 FBtr0089259|FBtr0289960|FBtr0089263|FBtr0339766|FBtr0089261|FBtr0089262|FBtr0089260 16337806|16337806|16337806|16337806|16337806|16337806|16337806 16340443|16338771|16340624|16338884|16340443|16338771|16340443 X + 16337768 16337894 stop_codon Dsp1 FlyBase G62025.1 CGACGACGACGGCGATGGAGATGATGACGAGAACCAATAGGTTTAGCAGTAAATACTCTTCACTATTTATACACACGATCGTTGTCGCGATGGAGGAAAGAAACATGATAACGTTGGTTGATCTATT 51 16337821 0.977751035 17 46 313 0.915254237 1.431363764 0.220338983 0.137254902 0.254237288 51 4 1 54 X:16337768-16337894 7 Dsp1 FBtr0089261|FBtr0089262|FBtr0089260|FBtr0089259|FBtr0289960|FBtr0089263|FBtr0339766 16337806|16337806|16337806|16337806|16337806|16337806|16337806 16340443|16338771|16340443|16340443|16338771|16340624|16338884 AATACTC 7mer-m8 dme-miR-12-5p X + 16337765 16337894 stop_codon Dsp1 FlyBase G46837.1 CGACGACGACGACGGCGATGGAGATGATGACGAGAACCAATAGGTTTAGCAGTAAATACTCTTCACTATTTATACACACGATCGTTGTCGCGATGGAGGAAAGAAACATGATAACGTTGGTTGATCTATT 23 16337821 0.974605725 10 22 138 0.947368421 1.556302501 0.131578947 0.52173913 0.710526316 23 2 0 36 X:16337765-16337894 7 13.5 4624 FBgn0011764 2716.763333 96.47 148.13 0.004969148 0.139939878 0.091136164 -2 -2 -2 0.1 dme-miR-305-3p 6mer2-7 TGTGCC X 16337942 16337947 + X_16337942_16337947_+ 1 1 1 0 Dsp1 FBtr0089259|FBtr0289960|FBtr0089263|FBtr0339766|FBtr0089261|FBtr0089262|FBtr0089260 16337806|16337806|16337806|16337806|16337806|16337806|16337806 16340443|16338771|16340624|16338884|16340443|16338771|16340443 X + 16337935 16337973 5'utr Dsp1 FlyBase G62026.1 ATAAGGGTGTGCCCGCTTTAGAGGTTTCGCTTTCCGGTA 11 16337951 0.881112217 3 9 110 0.857142857 1.079181246 0 0.272727273 0.428571429 11 2 0 12 X:16337935-16337973 6 Dsp1 FBtr0089261|FBtr0089262|FBtr0089260|FBtr0089259|FBtr0289960|FBtr0089263|FBtr0339766 16337806|16337806|16337806|16337806|16337806|16337806|16337806 16340443|16338771|16340443|16340443|16338771|16340624|16338884 TGTGCC 6mer2-7 dme-miR-305-3p X + 16337895 16337973 5'utr Dsp1 FlyBase G46838.1 ATCAGGTTGGCCAATGTGTGTTGAATATAAATTTATATATATAAGGGTGTGCCCGCTTTAGAGGTTTCGCTTTCCGGTA 10 16337950 0.992114475 6 8 94 0.785714286 0.740362689 0.428571429 0.3 0.5 10 2 1 11 X:16337895-16337973 6 6.5 4625 FBgn0011764 2716.763333 96.47 148.13 0.002392553 0.06737846 0.043880375 -9 -8 -8.5 0.1 dme-miR-276a-3p 7mer-A1 GTTCCTA X 16338315 16338321 + X_16338315_16338321_+ 0.823347108 0.823326756 0.823336932 1.44E-05 Dsp1 FBtr0089259|FBtr0289960|FBtr0089263|FBtr0339766|FBtr0089261|FBtr0089262|FBtr0089260 16337806|16337806|16337806|16337806|16337806|16337806|16337806 16340443|16338771|16340624|16338884|16340443|16338771|16340443 X + 16338295 16338326 5'utr Dsp1 FlyBase G62027.1 CGAAGAGAAGAGAAACCATTGTTCCTAGTGCA 22 16338314 0.961808214 4 22 109 1 1.397940009 0.48 0.136363636 0.24 22 0 0 25 X:16338295-16338326 7 Dsp1 FBtr0089261|FBtr0089262|FBtr0089260|FBtr0089259|FBtr0289960|FBtr0089263|FBtr0339766 16337806|16337806|16337806|16337806|16337806|16337806|16337806 16340443|16338771|16340443|16340443|16338771|16340624|16338884 GTTCCTA 7mer-A1 dme-miR-276a-3p X + 16338296 16338334 5'utr Dsp1 FlyBase G46839.1 GAAGAGAAGAGAAACCATTGTTCCTAGTGCATTTCGAAA 9 16338313 0.963563413 3 9 48 1 1.113943352 0.307692308 0.444444444 0.615384615 9 0 0 13 X:16338296-16338334 7 15.5 4626 FBgn0011764 2716.763333 96.47 148.13 0.005705318 0.160671711 0.104637818 1 2 1.5 0.1 dme-miR-277-3p 7mer-m8 TGCATTT X 16339066 16339072 + X_16339066_16339072_+ 0.612281779 0.610484029 0.611382904 0.001271237 Dsp1 FBtr0089259|FBtr0089263|FBtr0089261|FBtr0089260 16337806|16337806|16337806|16337806 16340443|16340624|16340443|16340443 X + 16338999 16339142 3'utr Dsp1 FlyBase G62030.1 ATTTTTTGCCGCTCACACACACAGTACCATATATCCATATATAATATCCCCCCGCAAAAAAACAAAATGCATTTCATTCAACTTACACTTACATTTACATTAATTCAGTTTGCGATTCGTGAATCCCCCAGATCCTTGGAGATA 27 16339081 0.962007769 13 25 171 0.941176471 1.505149978 0.088235294 0.222222222 0.382352941 27 2 0 32 X:16338999-16339142 7 Dsp1 FBtr0089261|FBtr0089260|FBtr0089259|FBtr0089263 16337806|16337806|16337806|16337806 16340443|16340443|16340443|16340624 TGCATTT 7mer-m8 dme-miR-277-3p X + 16339069 16339146 3'utr Dsp1 FlyBase G46846.1 ATTTCATTCAACTTACACTTACATTTACATTAATTCAGTTTGCGATTCGTGAATCCCCCAGATCCTTGGAGATAATTG 18 16339081 0.778799204 6 17 124 0.954545455 1.322219295 0.136363636 0.222222222 0.363636364 18 1 0 21 X:16339069-16339146 3 3 4627 FBgn0011764 2716.763333 96.47 148.13 0.001104255 0.031097751 0.020252481 -15 -15 -15 0.1 dme-miR-2a-2-5p 7mer-A1 GATGAGA X 16339340 16339346 + X_16339340_16339346_+ 0.782910521 0.782909978 0.78291025 3.54E-07 Dsp1 FBtr0089259|FBtr0089263|FBtr0089261|FBtr0089260 16337806|16337806|16337806|16337806 16340443|16340624|16340443|16340443 X + 16339190 16339521 3'utr Dsp1 FlyBase G62031.1 AGCCACGATCATAAGATACGGAAAGTTAGTCTTGGTTGGTTCGGTGCGCTTCGTGATGAGGTGGGAAGCAACCGCAACGCTGTCGTCGGACATTGCAACAATTGTTGTTGACTTGGCTGGCCATGTATATACTATTTGAAGTATTATTTAGATGAGACTACGTAGAAATTAACAAGAATCGAGAGCAAATAACGACATCATACAAGCCTAATATTAGAGTAGATTTCAGCGGGCCTGCAAAGTAATGTAAATTGCGTAGAAACCTTGAATATATTGTAGACTAGTTTTTTGAGGACTAGTATTGCCCAAAATGTTCCAGGCACAGAAACAGA 333 16339342 0.980574246 46 322 2376 0.971279373 2.57054294 0.224543081 0.138138138 0.250652742 333 11 0 372 X:16339190-16339521 7 Dsp1 FBtr0089261|FBtr0089260|FBtr0089259|FBtr0089263 16337806|16337806|16337806|16337806 16340443|16340443|16340443|16340624 GATGAGA 7mer-A1 dme-miR-2a-2-5p X + 16339276 16339442 3'utr Dsp1 FlyBase G46848.1 CGGACATTGCAACAATTGTTGTTGACTTGGCTGGCCATGTATATACTATTTGAAGTATTATTTAGATGAGACTACGTAGAAATTAACAAGAATCGAGAGCAAATAACGACATCATACAAGCCTAATATTAGAGTAGATTTCAGCGGGCCTGCAAAGTAATGTAAATT 167 16339342 0.978834893 22 159 1207 0.953846154 2.394451681 0.207692308 0.407185629 0.619230769 167 12 0 248 X:16339276-16339442 7 182.5 4628 FBgn0011764 2716.763333 96.47 148.13 0.067175524 1.891779828 1.232025923 -2 -2 -2 0.1 dme-miR-278-3p 7mer-A1 CCACCGA X 16339913 16339919 + X_16339913_16339919_+ 0.471598463 0.815973569 0.643786016 0.243509968 Dsp1 FBtr0089259|FBtr0089263|FBtr0089261|FBtr0089260 16337806|16337806|16337806|16337806 16340443|16340624|16340443|16340443 X + 16339870 16339952 3'utr Dsp1 FlyBase G62034.1 TACATATATATTTTTTAGCATGATTTTGATAGAGAATAACTCGCCACCGAGATTATATTCATAGAAGTGTGTCTAGGTTAAAC 77 16339922 0.847999238 19 75 569 0.966292135 1.33243846 0.269662921 0.142857143 0.258426966 77 0 3 86 X:16339870-16339952 7 Dsp1 FBtr0089261|FBtr0089260|FBtr0089259|FBtr0089263 16337806|16337806|16337806|16337806 16340443|16340443|16340443|16340624 CCACCGA 7mer-A1 dme-miR-278-3p X + 16339877 16339945 3'utr Dsp1 FlyBase G46851.1 ATATTTTTTAGCATGATTTTGATAGAGAATAACTCGCCACCGAGATTATATTCATAGAAGTGTGTCTAG 31 16339923 0.784384777 8 28 210 0.869565217 1.602059991 0.239130435 0.387096774 0.586956522 31 6 0 40 X:16339877-16339945 7 43 4629 FBgn0011764 2716.763333 96.47 148.13 0.015827658 0.445734425 0.29028556 -9 -10 -9.5 0.1 dme-miR-276a-3p 6mer3-8 AGTTCC X 16340026 16340031 + X_16340026_16340031_+ 0.999999516 1 0.999999758 3.54E-07 Dsp1 FBtr0089259|FBtr0089263|FBtr0089261|FBtr0089260 16337806|16337806|16337806|16337806 16340443|16340624|16340443|16340443 X + 16339970 16340096 3'utr Dsp1 FlyBase G62034.2 CTACAATTCGACGGTAATCCATCCCCTCTATATTAATAAATTACTATGAAAATTCCAGTTCCCTGTGCGCTTTGTTATAAGAACTAAACTATTATGAAATAAACTTTTAGAAATGAGATTCTTATTA 116 16340034 0.79397151 22 112 924 0.973856209 1.696065014 0.052287582 0.25862069 0.437908497 116 2 2 149 X:16339970-16340096 6 Dsp1 FBtr0089261|FBtr0089260|FBtr0089259|FBtr0089263 16337806|16337806|16337806|16337806 16340443|16340443|16340443|16340624 AGTTCC 6mer3-8 dme-miR-276a-3p X + 16340012 16340059 3'utr Dsp1 FlyBase G46853.1 ACTATGAAAATTCCAGTTCCCTGTGCGCTTTGTTATAAGAACTAAACT 64 16340042 0.601572389 7 59 519 0.942307692 1.514104821 0.115384615 0.46875 0.673076923 64 4 2 98 X:16340012-16340059 6 71 4630 FBgn0011764 2716.763333 96.47 148.13 0.026134039 0.735980097 0.479308715 -8 -16 -12 0.1 dme-miR-965-3p 7mer-m8 TACGCTT X 16340176 16340182 + X_16340176_16340182_+ 0.620203742 0.620204116 0.620203929 2.83E-07 Dsp1 FBtr0089259|FBtr0089263|FBtr0089261|FBtr0089260 16337806|16337806|16337806|16337806 16340443|16340624|16340443|16340443 X + 16340121 16340198 3'utr Dsp1 FlyBase G62035.1 GATGATGAATGATGTGTTCTTCAAAACCATTTGTCTTAAATCTTAATTTTTGATTTACGCTTGGTACATACGTAATAG 10 16340175 0.985029416 5 10 100 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 X:16340121-16340198 7 Dsp1 FBtr0089261|FBtr0089260|FBtr0089259|FBtr0089263 16337806|16337806|16337806|16337806 16340443|16340443|16340443|16340624 TACGCTT 7mer-m8 dme-miR-965-3p X + 16340165 16340196 3'utr Dsp1 FlyBase G46855.1 AATTTTTGATTTACGCTTGGTACATACGTAAT 8 16340175 0.775072616 4 7 63 0.75 0.954242509 0 0.375 0.583333333 8 3 0 9 X:16340165-16340196 7 7.5 4631 FBgn0011764 2716.763333 96.47 148.13 0.002760638 0.077744376 0.050631202 1 1 1 0.1 dme-miR-79-3p 7mer-m8 TAGCTTT X 16340244 16340250 + X_16340244_16340250_+ 0.620019272 0.613792595 0.616905934 0.004402942 Dsp1 FBtr0089259|FBtr0089263|FBtr0089261|FBtr0089260 16337806|16337806|16337806|16337806 16340443|16340624|16340443|16340443 X + 16340212 16340273 3'utr Dsp1 FlyBase G62036.1 ATGTTGTTACAAATCCCAATAATGAACAGCTTTAGCTTTTATATTTGATAGACAACAACACT 35 16340243 0.982887649 6 32 332 0.921052632 1.544068044 0.105263158 0.085714286 0.157894737 35 3 0 35 X:16340212-16340273 7 Dsp1 FBtr0089261|FBtr0089260|FBtr0089259|FBtr0089263 16337806|16337806|16337806|16337806 16340443|16340443|16340443|16340624 TAGCTTT 7mer-m8 dme-miR-79-3p X + 16340212 16340265 3'utr Dsp1 FlyBase G46856.1 ATGTTGTTACAAATCCCAATAATGAACAGCTTTAGCTTTTATATTTGATAGACA 19 16340243 0.758336317 5 18 174 0.964285714 1.431363764 0 0.368421053 0.571428571 19 1 0 27 X:16340212-16340265 7 25 4632 FBgn0011764 2716.763333 96.47 148.13 0.009202127 0.259147922 0.168770674 1 1 1 0.1 dme-miR-970-3p 8mer-A1 TCTTATGA X 16340459 16340466 + X_16340459_16340466_+ 0.60779947 0.630789148 0.619294309 0.016256102 Dsp1 FBtr0089263 16337806 16340624 X + 16340448 16340560 3'utr Dsp1 FlyBase G62038.1 CAGAGAAAAATTCTTATGAGTTGTTTTGCGTATGTACTACAAGTGGTACTGATGTGTGCCAAAATGGTTTTCAGGGGCATATTATATTACATTAGATGAATTCGTCCGAAATT 26 16340480 0.986621664 6 25 212 0.96875 1.190331698 0.5625 0.192307692 0.34375 26 0 1 31 X:16340448-16340560 8 Dsp1 FBtr0089263 16337806 16340624 TCTTATGA 8mer-A1 dme-miR-970-3p X + 16340448 16340506 3'utr Dsp1 FlyBase G46858.1 CAGAGAAAAATTCTTATGAGTTGTTTTGCGTATGTACTACAAGTGGTACTGATGTGTGC 19 16340458 0.960758437 4 19 143 1 1.431363764 0.666666667 0.315789474 0.518518519 19 0 0 27 X:16340448-16340506 8 11 4633 FBgn0011764 2716.763333 96.47 148.13 0.004048936 0.114025086 0.074259097 -21 1 -10 0.1 dme-miR-2b-2-5p 7mer-A1 TGAAGAA X 16355476 16355482 + X_16355476_16355482_+ 0.821492666 0.524188731 0.672840698 0.210225674 sl FBtr0074230 16354785 16356482 X + 16355448 16355498 3'utr sl FlyBase G62050.1 TATTACAATCTTCTTAAAGACTTTTAACTGAAGAAAATAGACCACTTTCAT 8 16355471 0.990897573 4 8 59 1 0.954242509 0 0.125 0.222222222 8 0 0 9 X:16355448-16355498 7 sl FBtr0074230 16354785 16356482 TGAAGAA 7mer-A1 dme-miR-2b-2-5p X + 16355448 16355484 3'utr sl FlyBase G46866.1 TATTACAATCTTCTTAAAGACTTTTAACTGAAGAAAA 10 16355471 0.726922264 2 9 72 1 1.113943352 0.153846154 0.3 0.461538462 10 0 0 13 X:16355448-16355484 7 6.5 4634 FBgn0003416 535.48 11.35 17.39333333 0.012138642 0.572687225 0.373706401 5 5 5 0.1 dme-miR-13b-2-5p 7mer-m8 TTTGACG X 16367055 16367061 + X_16367055_16367061_+ 0.652246673 0.658199514 0.655223093 0.004209265 nonA FBtr0340313|FBtr0074232|FBtr0100586 16367010|16367010|16365743 16371525|16368526|16368526 X + 16367036 16367074 5'utr nonA FlyBase G62065.1 CATACATATAAGGATGAGATTTGACGTACTCTCAAATAT 15 16367056 0.694216999 4 15 94 1 1.301029996 0.05 0.333333333 0.5 15 0 0 20 X:16367036-16367074 7 nonA FBtr0340313|FBtr0074232|FBtr0100586 16367010|16367010|16365743 16371525|16368526|16368526 TTTGACG 7mer-m8 dme-miR-13b-2-5p X + 16367000 16367072 stop_codon nonA FlyBase G46876.1 CGACGTTTTTAGACACTGGATCGATCGAACAATATACATACATATAAGGATGAGATTTGACGTACTCTCAAAT 8 16367056 0.969108838 6 8 44 1 1.041392685 0.181818182 0.375 0.545454545 8 0 0 11 X:16367000-16367072 7 10 4635 FBgn0004227 554.3866667 22.83 35.39333333 0.018037952 0.438020149 0.282539085 -1 -1 -1 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT X 16378190 16378196 + X_16378190_16378196_+ 0.658991768 0.65898225 0.658987009 6.79E-06 Fur2 FBtr0301300 16377374 16381545 X + 16378168 16378202 3'utr Fur2 FlyBase G62083.1 CAGCCGGGCATCCTGTCCAAGTGGCAGCTGATATT 7 16378189 0.822002147 4 7 32 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 X:16378168-16378202 7 Fur2 FBtr0301300 16377374 16381545 GGCAGCT 7mer-m8 dme-miR-980-3p X + 16378165 16378201 3'utr Fur2 FlyBase G46886.1 AATCAGCCGGGCATCCTGTCCAAGTGGCAGCTGATAT 5 16378189 0.955258602 2 5 23 1 0.954242509 0 0.6 0.777777778 5 0 0 9 X:16378165-16378201 7 5.5 4636 FBgn0004598 1868.423333 38.93666667 59.46333333 0.002943658 0.14125503 0.092493974 1 1 1 0.1 dme-bantam-3p 6mer2-7 GATCTC X 16378849 16378854 + X_16378849_16378854_+ 0.999873458 0.999873208 0.999873333 2.12E-07 Fur2 FBtr0301300 16377374 16381545 X + 16378762 16378892 3'utr Fur2 FlyBase G62085.1 TGGCCCTGTCACGACACCTGCGAAACGTGCGCCGGTGCCGGACCCGACAGCTGCCTCACATGTGCTCCGGCCCACCTGCACGTCATCGATCTCGCCGTCTGCCTGCAATTCTGCCCGGACGGATATTTTGA 110 16378847 0.970546132 15 105 603 0.959349593 2.071882007 0.284552846 0.109090909 0.203252033 110 5 0 118 X:16378762-16378892 6 Fur2 FBtr0301300 16377374 16381545 GATCTC 6mer2-7 dme-bantam-3p X + 16378809 16378891 3'utr Fur2 FlyBase G46888.1 CAGCTGCCTCACATGTGCTCCGGCCCACCTGCACGTCATCGATCTCGCCGTCTGCCTGCAATTCTGCCCGGACGGATATTTTG 56 16378846 0.943741831 12 53 310 0.946808511 1.949390007 0.393617021 0.392857143 0.638297872 56 5 0 89 X:16378809-16378891 6 64.5 4637 FBgn0004598 1868.423333 38.93666667 59.46333333 0.034521085 1.656536255 1.084702057 2 3 2.5 0.1 dme-miR-1008-3p 8mer-A1 AGCTGTGA X 16379038 16379045 + X_16379038_16379045_+ 0.624048596 0.514108425 0.56907851 0.077739461 Fur2 FBtr0301300 16377374 16381545 X + 16378985 16379052 3'utr Fur2 FlyBase G62086.1 TTCCCTGCGAGCCCAACTGTGCCTCATGCCAGGACCATCCCGAGTACTGCACTAGCTGTGATCACCAT 15 16379037 0.966416038 7 13 70 0.933333333 0.84509804 0 0 0 15 0 1 14 X:16378985-16379052 8 Fur2 FBtr0301300 16377374 16381545 AGCTGTGA 8mer-A1 dme-miR-1008-3p X + 16379021 16379058 3'utr Fur2 FlyBase G46889.1 ATCCCGAGTACTGCACTAGCTGTGATCACCATTTGGTT 14 16379037 0.781898946 6 14 90 1 1.301029996 0.1 0.428571429 0.6 14 0 0 20 X:16379021-16379058 8 12.5 4638 FBgn0004598 1868.423333 38.93666667 59.46333333 0.006690133 0.321034158 0.210213577 1 1 1 0.1 dme-miR-184-5p 6mer3-8 TGATAA X 16380973 16380978 + X_16380973_16380978_+ 1 0.999990106 0.999995053 7.00E-06 Fur2 FBtr0301300 16377374 16381545 X + 16380943 16381015 3'utr Fur2 FlyBase G62093.1 TAACATTGGCGAGGACGATGATACAGATGGTGATAATTCCGATGACGAGTTGGACGGCAACGTGGGCACAGAT 29 16380970 0.703454166 9 24 148 0.794117647 1.431363764 0.205882353 0.178571429 0.323529412 28 7 0 27 X:16380943-16381015 6 Fur2 FBtr0301300 16377374 16381545 TGATAA 6mer3-8 dme-miR-184-5p X + 16380942 16380990 3'utr Fur2 FlyBase G46892.1 TTAACATTGGCGAGGACGATGATACAGATGGTGATAATTCCGATGACGA 9 16380970 0.740560533 4 7 50 0.818181818 0.653212514 0.272727273 0.111111111 0.272727273 9 1 1 9 X:16380942-16380990 6 12.5 4639 FBgn0004598 1868.423333 38.93666667 59.46333333 0.006690133 0.321034158 0.210213577 3 3 3 0.1 dme-miR-283-5p 7mer-m8 TGATATT X 16381087 16381093 + X_16381087_16381093_+ 0.620179192 0.349551006 0.484865099 0.191363035 Fur2 FBtr0301300 16377374 16381545 X + 16381043 16381128 3'utr Fur2 FlyBase G62094.1 AAAGGCAATGATCATGGACACGAATTTTACATTGAGAGTACAAATGATATTGATGCGATCGAGTTTCACTGCAATGGAGCCGGAGC 15 16381090 0.972624085 8 14 79 0.944444444 1.230448921 0.222222222 0.133333333 0.277777778 15 1 0 17 X:16381043-16381128 7 Fur2 FBtr0301300 16377374 16381545 TGATATT 7mer-m8 dme-miR-283-5p X + 16381043 16381097 3'utr Fur2 FlyBase G46893.1 AAAGGCAATGATCATGGACACGAATTTTACATTGAGAGTACAAATGATATTGATG 7 16381057 0.972514894 2 7 33 1 0.954242509 0.444444444 0.285714286 0.444444444 7 0 0 9 X:16381043-16381097 7 6 4640 FBgn0004598 1868.423333 38.93666667 59.46333333 0.003211264 0.154096396 0.100902517 -3 30 13.5 0.1 dme-miR-8-3p 7mer-A1 AGTATTA X 16382126 16382132 - X_16382126_16382132_- 0.738218273 0.822817594 0.780517933 0.059820739 CG9992 FBtr0074309|FBtr0074310|FBtr0074307|FBtr0074306|FBtr0074308 16381952|16381952|16381952|16381952|16381952 16382257|16382257|16382257|16382257|16382257 X - 16382091 16382181 3'utr CG9992 FlyBase G68076.1 GATTTTGTATACTTAGCGTACGCAGCTAAATAGGACAGAAGAAGACATAAGTATTAACGAATTTCTAATGATTTACAAGGAAAAACTAACA 17 16382151 0.862998463 8 14 90 0.777777778 0.669006781 0.111111111 0.058823529 0.111111111 17 2 2 14 X:16382091-16382181 7 CG9992 FBtr0074306|FBtr0074308|FBtr0074310|FBtr0074307|FBtr0074309 16381952|16381952|16381952|16381952|16381952 16382257|16382257|16382257|16382257|16382257 AGTATTA 7mer-A1 dme-miR-8-3p X - 16382103 16382173 3'utr CG9992 FlyBase G51244.1 ATACTTAGCGTACGCAGCTAAATAGGACAGAAGAAGACATAAGTATTAACGAATTTCTAATGATTTACAAG 14 16382134 0.967241802 6 11 67 0.894736842 0.929418926 0.105263158 0.214285714 0.421052632 14 1 1 17 X:16382103-16382173 7 8 4641 FBgn0030744 1109.82 99.53333333 152.75 0.007208376 0.080375084 0.052373159 19 2 10.5 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA X 16388000 16388007 + X_16388000_16388007_+ 0.500120276 0.500120295 0.500120286 0 CG4239 FBtr0340314|FBtr0074268|FBtr0074270|FBtr0074269 16387959|16387959|16387959|16387959 16388702|16388702|16388702|16388702 X + 16387950 16388035 stop_codon CG4239 FlyBase G62102.1 AGAGCAACTAAAACTATTTGTAGTCAGCCCCATCTTCCCCCGGACAAATAGTACTTAACGCTGCCAGCCAAAGCTAACGCCTAAAA 39 16387998 0.958284295 8 35 168 0.925 1.568201724 0.15 0.025641026 0.05 39 3 0 37 X:16387950-16388035 8 CG4239 FBtr0074270|FBtr0074269|FBtr0340314|FBtr0074268 16387959|16387959|16387959|16387959 16388702|16388702|16388702|16388702 GTACTTAA 8mer-A1 dme-miR-252-5p X + 16387972 16388024 3'utr CG4239 FlyBase G46901.1 GTCAGCCCCATCTTCCCCCGGACAAATAGTACTTAACGCTGCCAGCCAAAGCT 17 16387998 0.932983327 6 15 66 0.875 1.322219295 0.166666667 0.294117647 0.5 17 3 0 21 X:16387972-16388024 8 20.5 4642 FBgn0030745 456.7933333 30.29666667 46.16666667 0.044878063 0.676642095 0.444043321 2 2 2 0.1 dme-miR-263a-5p 7mer-A1 TGCCATA X 16388355 16388361 + X_16388355_16388361_+ 0.762573314 0.772383477 0.767478396 0.006936859 CG4239 FBtr0340314|FBtr0074268|FBtr0074270|FBtr0074269 16387959|16387959|16387959|16387959 16388702|16388702|16388702|16388702 X + 16388315 16388385 3'utr CG4239 FlyBase G62104.1 ACAAGCGCAGCTGCAGAAACCAACCACAGACTTATTAAGATGCCATACTTAAGTGCTTTAAACATGGCCCA 6 16388349 0.945465336 5 6 22 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 X:16388315-16388385 7 CG4239 FBtr0074270|FBtr0074269|FBtr0340314|FBtr0074268 16387959|16387959|16387959|16387959 16388702|16388702|16388702|16388702 TGCCATA 7mer-A1 dme-miR-263a-5p X + 16388323 16388382 3'utr CG4239 FlyBase G46902.1 AGCTGCAGAAACCAACCACAGACTTATTAAGATGCCATACTTAAGTGCTTTAAACATGGC 7 16388349 0.947408243 5 6 32 0.909090909 1 0.272727273 0.285714286 0.545454545 7 1 0 10 X:16388323-16388382 7 2.5 4643 FBgn0030745 456.7933333 30.29666667 46.16666667 0.005472935 0.082517329 0.054151625 6 6 6 0.1 dme-miR-33-5p 8mer-A1 CAATGCAA X 16436888 16436895 + X_16436888_16436895_+ 0.61185521 0.593003918 0.602429564 0.013329882 hang FBtr0343571|FBtr0290069|FBtr0074276 16436811|16436811|16436732 16438454|16438454|16438454 X + 16436808 16436927 stop_codon hang FlyBase G62141.1 ATTGAGTGATCATACTCCAACTACAACTCCAACTACCACTACCACTACCAACCACAACTACCAACCACACCTCATCATCTCAATGCAAAATCACTTGAAATGTACAAAGCCAATCCAATC 48 16436908 0.949845876 13 47 206 0.983050847 1.763427994 0.033898305 0.208333333 0.355932203 48 1 0 58 X:16436808-16436927 8 hang FBtr0343571|FBtr0290069|FBtr0074276 16436811|16436811|16436732 16438454|16438454|16438454 CAATGCAA 8mer-A1 dme-miR-33-5p X + 16436801 16436926 stop_codon hang FlyBase G46930.1 GCGACAAATTGAGTGATCATACTCCAACTACAACTCCAACTACCACTACCACTACCAACCACAACTACCAACCACACCTCATCATCTCAATGCAAAATCACTTGAAATGTACAAAGCCAATCCAAT 23 16436908 0.810966884 10 22 96 0.970588235 1.217483944 0 0.347826087 0.558823529 23 0 1 33 X:16436801-16436926 8 14 4644 FBgn0026575 3688.81 55.80333333 85.77333333 0.003795262 0.25088107 0.163220892 -20 -20 -20 0.1 dme-miR-14-3p 6mer3-8 AAGACT X 16437147 16437152 + X_16437147_16437152_+ 0.999998803 0.999698936 0.999848869 0.000212061 hang FBtr0343571|FBtr0290069|FBtr0074276 16436811|16436811|16436732 16438454|16438454|16438454 X + 16437087 16437201 3'utr hang FlyBase G62143.1 AACTTTTTTTTCTTGCTTCTAGTCTTAAGAACTTAAATTACATATATGTACATCATATATAAGACTTTTTTTTTAAATGTTAACCTAGTATGTACCGCGCACACACCCACACACA 73 16437154 0.992570651 18 63 730 0.875 1.146128036 0.010416667 0.273972603 0.447916667 73 7 5 84 X:16437087-16437201 6 hang FBtr0343571|FBtr0290069|FBtr0074276 16436811|16436811|16436732 16438454|16438454|16438454 AAGACT 6mer3-8 dme-miR-14-3p X + 16437076 16437166 3'utr hang FlyBase G46932.1 TTATATAACAAAACTTTTTTTTCTTGCTTCTAGTCTTAAGAACTTAAATTACATATATGTACATCATATATAAGACTTTTTTTTTAAATGT 41 16437154 0.991006703 14 40 432 0.983333333 1.770852012 0.066666667 0.341463415 0.55 41 1 0 59 X:16437076-16437166 6 28 4645 FBgn0026575 3688.81 55.80333333 85.77333333 0.007590524 0.501762141 0.326441785 -7 -7 -7 0.1 dme-miR-305-3p 6mer2-7 TGTGCC X 16438886 16438891 - X_16438886_16438891_- 0.999787529 0.999796126 0.999791827 6.08E-06 CG9947 FBtr0343350 16437419 16439498 X - 16438850 16439054 3'utr CG9947 FlyBase G68114.1 TTTGTTGATGTTCTGTTCGTCCTTGATCCTATATGTGTGCACCCAATTTGTGATTTTTTCTATAACCTATTCCACCGCACATCACACACAACAAACAGTGGATACCCTTTGCAACATCCACACGAATTTCCACCATTGCTTTAGAAACAGCAAAGTAATACTTTGTGCCTGACTTAATCTGCATTGCCTTTTACTACGTTTATAC 214 16438891 0.988902453 28 209 1970 0.973684211 2.413299764 0.27443609 0.200934579 0.357142857 214 7 0 259 X:16438850-16439054 6 CG9947 FBtr0343350 16437419 16439498 TGTGCC 6mer2-7 dme-miR-305-3p X - 16438852 16438959 3'utr CG9947 FlyBase G51272.1 CAGTGGATACCCTTTGCAACATCCACACGAATTTCCACCATTGCTTTAGAAACAGCAAAGTAATACTTTGTGCCTGACTTAATCTGCATTGCCTTTTACTACGTTTAT 62 16438891 0.982563921 11 62 468 1 1.995635195 0.161616162 0.403225806 0.626262626 62 0 0 99 X:16438852-16438959 6 72.5 4646 FBgn0030752 672.6566667 47.85 73.07333333 0.107781582 1.515151515 0.992154001 0 0 0 0.1 dme-miR-1012-3p 6mer2-7 TGACTA X 16445250 16445255 + X_16445250_16445255_+ 0.999999447 0.999999999 0.999999723 4.24E-07 rngo FBtr0343349 16444757 16445367 X + 16445212 16445268 3'utr rngo FlyBase G62161.1 TGAAACAAGTAAATACAAAAGAAAAACGAAAGAATGCCTGACTATTAAATAATATTA 13 16445255 0.903037769 5 12 57 0.933333333 1.146128036 0.066666667 0.153846154 0.266666667 13 1 0 14 X:16445212-16445268 6 rngo FBtr0343349 16444757 16445367 TGACTA 6mer2-7 dme-miR-1012-3p X + 16445238 16445268 3'utr rngo FlyBase G46943.1 CGAAAGAATGCCTGACTATTAAATAATATTA 9 16445256 0.762802238 3 6 53 0.769230769 1 0 0.333333333 0.538461538 9 3 0 10 X:16445238-16445268 6 10 4647 FBgn0030753 1218.62 66.64333333 101.9733333 0.008206004 0.150052518 0.098064854 -5 -6 -5.5 0.1 dme-miR-932-5p 6mer2-7 GAATTG X 16445317 16445322 + X_16445317_16445322_+ 0.999810849 0.996202756 0.998006803 0.002551241 rngo FBtr0343349 16444757 16445367 X + 16445280 16445360 3'utr rngo FlyBase G62162.1 AATTTGAATTAGTATTAAGGGTCTGTCAAGAAAAACTGAATTGGGTTCAATAATAAATGGTCGATAGTATTGTTTTGGATT 32 16445320 0.80084538 7 31 244 0.975 1.290034611 0.125 0.1875 0.35 32 0 1 39 X:16445280-16445360 6 rngo FBtr0343349 16444757 16445367 GAATTG 6mer2-7 dme-miR-932-5p X + 16445308 16445350 3'utr rngo FlyBase G46944.1 AGAAAAACTGAATTGGGTTCAATAATAAATGGTCGATAGTATT 8 16445320 0.776556172 3 8 53 1 1.113943352 0.153846154 0.5 0.692307692 8 0 0 13 X:16445308-16445350 6 11 4648 FBgn0030753 1218.62 66.64333333 101.9733333 0.009026604 0.16505777 0.107871339 -3 -3 -3 0.1 dme-miR-305-3p 6mer3-8 ATGTGC X 16452135 16452140 + X_16452135_16452140_+ 0.604849237 0.740579908 0.672714573 0.095976098 Rbp2 FBtr0343633|FBtr0074280|FBtr0343632|FBtr0074281|FBtr0074279 16452084|16452084|16452084|16452084|16452084 16453615|16454972|16453615|16453615|16454972 X + 16452096 16452172 3'utr Rbp2 FlyBase G62168.1 TTGGTCCGCAATACAATATATGCCTGATATGATATTTTGATGTGCGAGAACGAGATAATCCGAGATAGAGGGAGAGA 41 16452152 0.870226809 13 36 258 0.882352941 1.653212514 0.509803922 0.146341463 0.31372549 41 6 0 45 X:16452096-16452172 6 Rbp2 FBtr0074279|FBtr0343633|FBtr0074280|FBtr0343632|FBtr0074281 16452084|16452084|16452084|16452084|16452084 16454972|16453615|16454972|16453615|16453615 ATGTGC 6mer3-8 dme-miR-305-3p X + 16452105 16452171 3'utr Rbp2 FlyBase G46949.1 AATACAATATATGCCTGATATGATATTTTGATGTGCGAGAACGAGATAATCCGAGATAGAGGGAGAG 20 16452114 0.818703012 7 16 129 0.806451613 0.920818754 0.709677419 0.45 0.64516129 20 4 2 25 X:16452105-16452171 6 16.5 4649 FBgn0262734 5061.32 184.5666667 285.3533333 0.003260019 0.089398591 0.05782305 -17 21 2 0.1 dme-miR-283-5p 6mer3-8 TGATAT X 16452337 16452342 + X_16452337_16452342_+ 0.98053414 0.977977332 0.979255736 0.001807931 Rbp2 FBtr0343633|FBtr0074280|FBtr0343632|FBtr0074281|FBtr0074279 16452084|16452084|16452084|16452084|16452084 16453615|16454972|16453615|16453615|16454972 X + 16452299 16452418 3'utr Rbp2 FlyBase G62170.1 AATTAATAACACTACGCTACATACCTATTATATACGAATGATATGTACTACATTACAAGAACGAAGATGGAACAACAGGCTGGCCTCTGTGTCTCTGTGTCAGTGTCCAGTGTCAGTCAG 390 16452342 0.950374342 17 383 2387 0.982954545 2.238046103 0.037878788 0.248717949 0.445075758 390 7 2 519 X:16452299-16452418 6 Rbp2 FBtr0074279|FBtr0343633|FBtr0074280|FBtr0343632|FBtr0074281 16452084|16452084|16452084|16452084|16452084 16454972|16453615|16454972|16453615|16453615 TGATAT 6mer3-8 dme-miR-283-5p X + 16452248 16452370 3'utr Rbp2 FlyBase G46950.1 GATGACGATGACAAGGAGCATCAGCAGCATGCATATATAAACACATACATTAATTAATAACACTACGCTACATACCTATTATATACGAATGATATGTACTACATTACAAGAACGAAGATGGAA 316 16452342 0.940728654 15 312 1873 0.991561181 2.371067862 0.05907173 0.370253165 0.580168776 316 3 1 470 X:16452248-16452370 6 333 4650 FBgn0262734 5061.32 184.5666667 285.3533333 0.065793113 1.804226115 1.166974278 -5 -5 -5 0.1 dme-miR-305-3p 6mer3-8 ATGTGC X 16452645 16452650 + X_16452645_16452650_+ 0.854183758 0.999998003 0.92709088 0.10310621 Rbp2 FBtr0343633|FBtr0074280|FBtr0343632|FBtr0074281|FBtr0074279 16452084|16452084|16452084|16452084|16452084 16453615|16454972|16453615|16453615|16454972 X + 16452615 16452716 3'utr Rbp2 FlyBase G62172.1 TATATATATGGTATATATATATATACGGTTATGTGCGCTTCATTGTACAGCAGCTGTATGCACGCTGCTATTTGTTAGTTAAGTGATGGATATAAACCAACA 14 16452658 0.994985638 7 13 138 0.933333333 1.146128036 0.333333333 0.071428571 0.133333333 14 1 0 14 X:16452615-16452716 6 Rbp2 FBtr0074279|FBtr0343633|FBtr0074280|FBtr0343632|FBtr0074281 16452084|16452084|16452084|16452084|16452084 16454972|16453615|16454972|16453615|16453615 ATGTGC 6mer3-8 dme-miR-305-3p X + 16452633 16452690 3'utr Rbp2 FlyBase G46952.1 ATATATACGGTTATGTGCGCTTCATTGTACAGCAGCTGTATGCACGCTGCTATTTGTT 6 16452648 0.9840768 3 5 51 1 1.041392685 0.454545455 0.5 0.727272727 6 0 0 11 X:16452633-16452690 6 6.5 4651 FBgn0262734 5061.32 184.5666667 285.3533333 0.00128425 0.035217627 0.022778777 -13 -3 -8 0.1 dme-bantam-3p 7mer-A1 GATCTCA X 1649339 1649345 + X_1649339_1649345_+ 0.823346474 0.823346662 0.823346568 1.41E-07 br FBtr0070261|FBtr0330406|FBtr0300427|FBtr0300428|FBtr0332293|FBtr0070263 1648712|1649105|1648712|1648712|1648712|1648712 1649378|1649378|1649378|1649378|1649378|1649378 X + 1649280 1649357 3'utr br FlyBase G58005.1 GAAAAAGGAGCAGAGGGAGATTAGGACTATACTACTACCACGTAGACATTTCAATTTCGGATCTCACAGAACGGAAAA 40 1649335 0.974229974 7 39 240 1 1.653212514 0.4 0.125 0.222222222 40 0 0 45 X:1649280-1649357 7 br FBtr0300427|FBtr0070261|FBtr0330406|FBtr0070263|FBtr0300428|FBtr0332293 1648712|1648712|1649105|1648712|1648712|1648712 1649378|1649378|1649378|1649378|1649378|1649378 GATCTCA 7mer-A1 dme-bantam-3p X + 1649282 1649362 3'utr br FlyBase G43884.1 AAAAGGAGCAGAGGGAGATTAGGACTATACTACTACCACGTAGACATTTCAATTTCGGATCTCACAGAACGGAAAATTCAA 33 1649335 0.982257346 8 29 214 0.895833333 1.633468456 0.3125 0.333333333 0.541666667 33 5 0 43 X:1649282-1649362 7 25.5 4652 FBgn0000210 1688.696667 27.97 43.00333333 0.015100403 0.911691098 0.592977289 4 4 4 0.1 dme-miR-12-5p 6mer3-8 AATACT X 16543530 16543535 - X_16543530_16543535_- 0.984576793 0.989670242 0.987123518 0.003601578 CG9902 FBtr0334035 16542122 16543682 X - 16543516 16543562 3'utr CG9902 FlyBase G68141.1 AAGGAACAAACGGAACAGGATCTGCCAAATACTAGAAAACACAAAGA 50 16543540 0.889663327 3 50 142 1 1.77815125 0.25 0.14 0.283333333 50 0 0 60 X:16543516-16543562 6 CG9902 FBtr0334035 16542122 16543682 AATACT 6mer3-8 dme-miR-12-5p X - 16543520 16543556 3'utr CG9902 FlyBase G51292.1 CAAACGGAACAGGATCTGCCAAATACTAGAAAACACA 27 16543540 0.881598182 4 26 80 0.945945946 1.544068044 0.216216216 0.296296296 0.486486486 27 2 0 35 X:16543520-16543556 6 38.5 4653 FBgn0030757 334.18 9.023333333 13.79333333 0.115207373 4.266715922 2.79120348 5 5 5 0.1 dme-bantam-3p 8mer-A1 TGATCTCA X 16543637 16543644 - X_16543637_16543644_- 0.631135761 0.631135891 0.631135826 7.07E-08 CG9902 FBtr0074296|FBtr0334035 16543568|16542122 16543682|16543682 X - 16543620 16543672 3'utr CG9902 FlyBase G68143.1 AGTCCCCAGGAGATGTCATAGAAACTAGTGATCTCAAACAGGTCCCCCTAAAT 145 16543644 0.73443773 7 141 637 0.98245614 2.225309282 0.087719298 0.166666667 0.298245614 144 3 0 168 X:16543620-16543672 8 CG9902 FBtr0334035 16542122 16543682 TGATCTCA 8mer-A1 dme-bantam-3p X - 16543581 16543771 stop_codon CG9902 FlyBase G51293.1 TGATCCATGACGCCCTAAAAACTACAAACGTGCCACAGAAGACTCTGGACTTACAGTTCTTGTCCAAGAAGCACATAAGAACTGGATAACAGACCCAGGAGTCCCCAGGAGATGTCATAGAAACTAGTGATCTCAAACAGGTCCCCCTAAATAGCCTGTTCAAAGTAGAGGGACTGGATGCAAGACAGGCG 112 16543644 0.956704622 14 106 480 0.950310559 1.883661435 0.093167702 0.383928571 0.571428571 112 7 1 153 X:16543581-16543771 8 115.5 4654 FBgn0030757 334.18 9.023333333 13.79333333 0.34562212 12.80014777 8.37361044 0 0 0 0.1 dme-miR-317-5p 6mer2-7 TATCCC X 16548995 16549000 - X_16548995_16549000_- 0.99405967 0.992143938 0.993101804 0.001354675 Arp2 FBtr0074295|FBtr0112868|FBtr0310673 16548783|16548288|16548783 16549241|16549241|16549241 X - 16548972 16549024 3'utr Arp2 FlyBase G68153.1 CGCAGACATGTCGTCACTGGTCGTTATCCCCGTACAATATAATGTAATATTTC 12 16549007 0.983959236 4 12 93 1 1.113943352 0.076923077 0.083333333 0.153846154 12 0 0 13 X:16548972-16549024 6 Arp2 FBtr0074295|FBtr0112868|FBtr0310673 16548783|16548288|16548783 16549241|16549241|16549241 TATCCC 6mer2-7 dme-miR-317-5p X - 16548988 16549103 3'utr Arp2 FlyBase G51299.1 TTTTTTTTTGTGTGTGCCTGTGCGAGTGGGCGTGTCTGTTGAGCAGGATTGGTCCACTTGCCCTTAGATTATCTATAATCGCAGACATGTCGTCACTGGTCGTTATCCCCGTACAA 23 16549007 0.892785871 11 22 178 0.957446809 1.653212514 0.234042553 0.652173913 0.829787234 23 2 0 45 X:16548988-16549103 6 11.5 4655 FBgn0011742 1137.096667 58.09666667 88.67333333 0.010113476 0.197945952 0.129689497 7 7 7 0.1 dme-miR-276a-3p 6mer2-7 GTTCCT X 16556788 16556793 - X_16556788_16556793_- 0.999991217 0.995475107 0.997733162 0.003193365 Pp2B-14D FBtr0074294|FBtr0309793|FBtr0305593 16556762|16554625|16555464 16557694|16557694|16557694 X - 16556774 16556806 3'utr Pp2B-14D FlyBase G68170.1 ATAGTCCATAAATGTTCCTTATACGAATTAAAC 8 16556794 0.903501627 2 8 62 1 1.113943352 0 0.375 0.615384615 8 0 0 13 X:16556774-16556806 6 Pp2B-14D FBtr0305593|FBtr0309793|FBtr0074294 16555464|16554625|16556762 16557694|16557694|16557694 GTTCCT 6mer2-7 dme-miR-276a-3p X - 16556784 16556832 3'utr Pp2B-14D FlyBase G51313.1 CGAAACCATTTGCAATATGTGCCGCAATAGTCCATAAATGTTCCTTATA 5 16556787 0.984620057 4 5 36 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 X:16556784-16556832 6 5.5 4656 FBgn0011826 681.1066667 22.76 35.00666667 0.008075093 0.241652021 0.157112931 1 -6 -2.5 0.1 dme-miR-932-5p 6mer2-7 GAATTG X 16557616 16557621 - X_16557616_16557621_- 0.999994535 0.99992625 0.999960392 4.83E-05 Pp2B-14D FBtr0074294|FBtr0309793|FBtr0305593 16556762|16554625|16555464 16557694|16557694|16557694 X - 16557592 16557658 3'utr Pp2B-14D FlyBase G68175.1 AGATGCAGATGCGGCACGGTGGAGTCTGGCGAGGTCTGAATTGGTCTGAAGGAGGGGCTGAGTGGAG 13 16557618 0.732007478 6 12 71 1 1.113943352 0.461538462 0 0 13 0 0 13 X:16557592-16557658 6 Pp2B-14D FBtr0305593|FBtr0309793|FBtr0074294 16555464|16554625|16556762 16557694|16557694|16557694 GAATTG 6mer2-7 dme-miR-932-5p X - 16557581 16557655 3'utr Pp2B-14D FlyBase G51315.1 TGCAGATGCGGCACGGTGGAGTCTGGCGAGGTCTGAATTGGTCTGAAGGAGGGGCTGAGTGGAGCGGAGCGGAGG 8 16557618 0.954280191 5 8 38 1 1 0.3 0.25 0.4 8 0 0 10 X:16557581-16557655 6 7 4657 FBgn0011826 681.1066667 22.76 35.00666667 0.010277392 0.307557118 0.199961912 -3 -3 -3 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA X 16564044 16564049 - X_16564044_16564049_- 0.995375501 0.995778964 0.995577233 0.000285318 CanA-14F FBtr0305198|FBtr0074293 16560682|16561675 16566275|16566275 X - 16564018 16564071 3'utr CanA-14F FlyBase G68186.1 AAAACAGAAAAGAAACCGAACTATGTGAATTAACTATTAAGTTTAAATTATACA 19 16564042 0.978540548 4 19 130 1 1.414973348 0.115384615 0.315789474 0.5 19 0 0 26 X:16564018-16564071 6 CanA-14F FBtr0074293|FBtr0305198 16561675|16560682 16566275|16566275 ATGTGA 6mer3-8 dme-miR-1003-3p X - 16564028 16564072 3'utr CanA-14F FlyBase G51321.1 AAAAACAGAAAAGAAACCGAACTATGTGAATTAACTATTAAGTTT 22 16564042 0.980200402 3 22 159 1 1.491361694 0.225806452 0.409090909 0.580645161 22 0 0 31 X:16564028-16564072 6 20.5 4658 FBgn0030758 2469.373333 77.76333333 120.6366667 0.008301701 0.263620387 0.169931751 -7 -7 -7 0.1 dme-miR-12-5p 6mer3-8 AATACT X 1659716 1659721 + X_1659716_1659721_+ 0.999995312 0.999976101 0.999985706 1.36E-05 br FBtr0070265|FBtr0303562 1659601|1654641 1664869|1664869 X + 1659693 1659731 3'utr br FlyBase G58010.1 AGCAGCAGCCAAGACCAGCTACAAATACTTTGCCCATTG 9 1659718 0.97205643 3 9 53 1 0.954242509 0.555555556 0 0 9 0 0 9 X:1659693-1659731 6 br FBtr0070265|FBtr0303562 1659601|1654641 1664869|1664869 AATACT 6mer3-8 dme-miR-12-5p X + 1659696 1659734 3'utr br FlyBase G43887.1 AGCAGCCAAGACCAGCTACAAATACTTTGCCCATTGTTT 10 1659729 0.990986426 4 6 61 0.625 0.698970004 0.0625 0.4 0.625 10 5 1 10 X:1659696-1659734 6 9 4659 FBgn0000210 1688.696667 27.97 43.00333333 0.005329554 0.321773329 0.209286102 -2 -13 -7.5 0.1 dme-miR-317-5p 6mer2-7 TATCCC X 1659883 1659888 + X_1659883_1659888_+ 0.576586344 0.550728969 0.563657656 0.018283872 br FBtr0070265|FBtr0303562 1659601|1654641 1664869|1664869 X + 1659844 1659888 3'utr br FlyBase G58011.1 ATATTAGGCATATTTTGGCGTCAACTGTTTTATTACTCTTATCCC 15 1659876 0.850632795 5 12 156 0.866666667 1.113943352 0 0 0 15 2 0 13 X:1659844-1659888 6 br FBtr0070265|FBtr0303562 1659601|1654641 1664869|1664869 TATCCC 6mer2-7 dme-miR-317-5p X + 1659850 1659883 3'utr br FlyBase G43888.1 GGCATATTTTGGCGTCAACTGTTTTATTACTCTT 9 1659876 0.91975619 4 7 80 0.818181818 0.954242509 0.090909091 0.222222222 0.363636364 9 2 0 9 X:1659850-1659883 1 5 4660 FBgn0000210 1688.696667 27.97 43.00333333 0.002960863 0.17876296 0.116270057 7 7 7 0.1 dme-miR-980-3p 6mer3-8 GGCAGC X 16609165 16609170 + X_16609165_16609170_+ 0.999800694 0.999996315 0.999898505 0.00013831 Nup153 FBtr0074284|FBtr0340158|FBtr0299587 16609097|16609097|16609097 16610459|16610459|16610459 X + 16609106 16609184 3'utr Nup153 FlyBase G62212.1 ATCGCAGTCGGCCATCACGATAGCAAATGAGGCCGCCGTCGGATTAGGATTAAGATATTGGCAGCCATTGCCGAGAGTA 15 16609164 0.994684754 6 14 66 1 1.146128036 0.142857143 0 0 14 0 0 14 X:16609106-16609184 6 Nup153 FBtr0299587|FBtr0074284|FBtr0340158 16609097|16609097|16609097 16610459|16610459|16610459 GGCAGC 6mer3-8 dme-miR-980-3p X + 16609127 16609181 3'utr Nup153 FlyBase G46977.1 AGCAAATGAGGCCGCCGTCGGATTAGGATTAAGATATTGGCAGCCATTGCCGAGA 6 16609164 0.948960344 3 5 25 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 X:16609127-16609181 6 5.5 4661 FBgn0061200 3129.656667 47.90333333 73.78666667 0.001757381 0.114814557 0.074539212 1 1 1 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA X 16609733 16609738 + X_16609733_16609738_+ 0.999996202 0.999079064 0.999537633 0.000648488 Nup153 FBtr0074284|FBtr0340158|FBtr0299587 16609097|16609097|16609097 16610459|16610459|16610459 X + 16609719 16609754 3'utr Nup153 FlyBase G62214.1 CATACTACGCATATTGATGATTACAAATTATAAAAA 8 16609733 0.670631461 4 8 54 1 0.954242509 0 0.125 0.222222222 8 0 0 9 X:16609719-16609754 6 Nup153 FBtr0299587|FBtr0074284|FBtr0340158 16609097|16609097|16609097 16610459|16610459|16610459 TGATGA 6mer3-8 dme-miR-2a-2-5p X + 16609722 16609751 3'utr Nup153 FlyBase G46978.1 ACTACGCATATTGATGATTACAAATTATAA 5 16609733 0.638750851 4 5 35 1 0.954242509 0 0.6 0.777777778 5 0 0 9 X:16609722-16609751 6 6.5 4662 FBgn0061200 3129.656667 47.90333333 73.78666667 0.002076905 0.135689931 0.088091796 0 0 0 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT X 16614135 16614141 + X_16614135_16614141_+ 0.658985218 0.658984632 0.658984925 4.24E-07 mbt FBtr0074285 16614013 16614856 X + 16613967 16614180 stop_codon mbt FlyBase G62229.1 CCGTCGCTGCTGGTTCCGCTGATGCGCAATGCGCGACACCATCCGTAGTTGGATGCCACTGGACAACCCAGACGATCCGGCTGCTCGATGAAAGCAATCATTCCCACAGACAACGGATCCCGGCCCGTGGGCATCCATCTATTAAATTCTAGTATTAACATTCAGTTTGGCAGCTGTACTTAAATCCCCGGAGAATCCTCGAAACGTTGTAAAG 633 16614133 0.953262788 26 615 5004 0.970914127 2.146748014 0.159279778 0.129541864 0.236842105 633 17 4 701 X:16613967-16614180 7 mbt FBtr0074285 16614013 16614856 GGCAGCT 7mer-m8 dme-miR-980-3p X + 16614110 16614168 3'utr mbt FlyBase G46987.1 AAATTCTAGTATTAACATTCAGTTTGGCAGCTGTACTTAAATCCCCGGAGAATCCTCGA 455 16614133 0.737649622 10 444 3565 0.979885057 2.231724383 0.139367816 0.384615385 0.597701149 455 11 3 682 X:16614110-16614168 7 529 4663 FBgn0025743 524.9733333 19.44666667 29.74666667 1.007670231 27.20260542 17.78350515 2 2 2 0.1 dme-miR-277-3p 7mer-A1 GCATTTA X 16614318 16614324 + X_16614318_16614324_+ 0.823349562 0.823349168 0.823349365 2.83E-07 mbt FBtr0074285 16614013 16614856 X + 16614299 16614334 3'utr mbt FlyBase G62231.1 CGGATGGAGAAACGATATAGCATTTATCTGCCCGAG 7 16614316 0.684407251 4 7 41 1 1.079181246 0.25 0.571428571 0.75 7 0 0 12 X:16614299-16614334 7 mbt FBtr0074285 16614013 16614856 GCATTTA 7mer-A1 dme-miR-277-3p X + 16614283 16614338 3'utr mbt FlyBase G46988.1 CATCCTGCAACCGATACGGATGGAGAAACGATATAGCATTTATCTGCCCGAGAACC 6 16614326 0.965924525 4 5 27 0.714285714 0.698970004 0.285714286 0.166666667 0.285714286 6 2 0 5 X:16614283-16614338 7 5.5 4664 FBgn0025743 524.9733333 19.44666667 29.74666667 0.010476723 0.28282482 0.184894666 2 -8 -3 0.1 dme-miR-277-3p 6mer2-7 GCATTT X 16614383 16614388 + X_16614383_16614388_+ 0.997715749 0.999999955 0.998857852 0.001615244 mbt FBtr0074285 16614013 16614856 X + 16614373 16614433 3'utr mbt FlyBase G62232.1 GAGTATTTCAGCATTTTGCTCTCTGTCTCTTGTCAATATTGATTTGTGTGCGTGTGTGTTT 7 16614389 0.998602379 5 5 81 0.777777778 0.84509804 0.222222222 0.142857143 0.333333333 7 2 0 7 X:16614373-16614433 6 mbt FBtr0074285 16614013 16614856 GCATTT 6mer2-7 dme-miR-277-3p X + 16614354 16614404 3'utr mbt FlyBase G46989.1 TATATATATATACATATATGAGTATTTCAGCATTTTGCTCTCTGTCTCTTG 6 16614389 0.993776173 5 5 64 0.875 0.84509804 0.125 0.166666667 0.375 6 1 0 7 X:16614354-16614404 6 4.5 4665 FBgn0025743 524.9733333 19.44666667 29.74666667 0.008571864 0.231402125 0.151277454 -6 -6 -6 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA X 16624331 16624336 - X_16624331_16624336_- 0.999999952 0.999999653 0.999999802 2.12E-07 Rok FBtr0074286|FBtr0340151 16624209|16624209 16626162|16626162 X - 16624297 16624346 3'utr Rok FlyBase G68217.1 ACTATTATTATGATGATCATTCGTATTACGTTTATGTTTAATTGTACTCT 12 16624336 0.990467617 5 11 125 1 1.176091259 0 0.166666667 0.333333333 12 0 0 15 X:16624297-16624346 6 Rok FBtr0074286|FBtr0340151 16624209|16624209 16626162|16626162 TGATGA 6mer3-8 dme-miR-2a-2-5p X - 16624319 16624346 3'utr Rok FlyBase G51339.1 ACTATTATTATGATGATCATTCGTATTA 11 16624336 0.752953059 2 10 104 0.9375 1.176091259 0 0.272727273 0.5 11 1 0 15 X:16624319-16624346 6 10.5 4666 FBgn0026181 1648.443333 28.48333333 43.82 0.006369646 0.36863663 0.239616613 0 0 0 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA X 16624512 16624519 - X_16624512_16624519_- 0.625331847 0.625332909 0.625332378 7.78E-07 Rok FBtr0074286|FBtr0340151 16624209|16624209 16626162|16626162 X - 16624492 16624566 3'utr Rok FlyBase G68218.1 GTTTTACAGAGCAGAGTGTATGTACAGAGTGAGAGGCGCCAGCGGATTGCATTTAAAAGTAACAATAATAGCGAA 193 16624520 0.910514222 4 190 915 0.995391705 2.033423755 0.400921659 0.10880829 0.207373272 193 0 1 216 X:16624492-16624566 8 Rok FBtr0074286|FBtr0340151 16624209|16624209 16626162|16626162 TGCATTTA 8mer-A1 dme-miR-277-3p X - 16624496 16624561 3'utr Rok FlyBase G51340.1 ACAGAGCAGAGTGTATGTACAGAGTGAGAGGCGCCAGCGGATTGCATTTAAAAGTAACAATAATAG 117 16624520 0.907027154 5 116 560 0.98757764 1.72427587 0.341614907 0.324786325 0.50931677 117 0 2 159 X:16624496-16624561 8 149 4667 FBgn0026181 1648.443333 28.48333333 43.82 0.090388306 5.231129315 3.400273848 1 1 1 0.1 dme-miR-33-5p 8mer-A1 CAATGCAA X 16625779 16625786 - X_16625779_16625786_- 0.634551465 0.634502861 0.634527163 3.44E-05 Rok FBtr0340153|FBtr0074286|FBtr0340151 16625107|16624209|16624209 16626162|16626162|16626162 X - 16625767 16625810 3'utr Rok FlyBase G68225.1 TGTATCTTAAAGAACATGTAATGCCAATGCAACTCGTTTAACGC 26 16625789 0.827796051 6 24 150 0.933333333 1.146128036 0.066666667 0.115384615 0.233333333 26 1 1 28 X:16625767-16625810 8 Rok FBtr0074286|FBtr0340151|FBtr0340153 16624209|16624209|16625107 16626162|16626162|16626162 CAATGCAA 8mer-A1 dme-miR-33-5p X - 16625758 16625815 3'utr Rok FlyBase G51347.1 AAAGCTGTATCTTAAAGAACATGTAATGCCAATGCAACTCGTTTAACGCTTACCTAAC 19 16625789 0.964536286 3 18 102 1 1.531478917 0.382352941 0.421052632 0.676470588 19 0 0 34 X:16625758-16625815 8 21 4668 FBgn0026181 1648.443333 28.48333333 43.82 0.012739291 0.737273259 0.479233227 3 3 3 0.1 dme-miR-980-3p 6mer2-7 GCAGCT X 16626085 16626090 - X_16626085_16626090_- 0.983424527 0.98233784 0.982881184 0.000768413 Rok FBtr0340153|FBtr0074286|FBtr0340151 16625107|16624209|16624209 16626162|16626162|16626162 X - 16626054 16626113 3'utr Rok FlyBase G68227.1 TGCCAGATCGCAGGCGTGGCAATGCAGCTTGAGCCGGAGCAGTCGCGACTCTCCAGCCCC 80 16626084 0.728811412 4 73 263 0.923076923 1.225309282 0.285714286 0.1375 0.241758242 80 3 4 84 X:16626054-16626113 6 Rok FBtr0074286|FBtr0340151|FBtr0340153 16624209|16624209|16625107 16626162|16626162|16626162 GCAGCT 6mer2-7 dme-miR-980-3p X - 16626064 16626113 3'utr Rok FlyBase G51349.1 TGCCAGATCGCAGGCGTGGCAATGCAGCTTGAGCCGGAGCAGTCGCGACT 52 16626084 0.709587782 4 50 164 0.964285714 1.306425028 0.345238095 0.403846154 0.630952381 52 0 3 81 X:16626064-16626113 6 64.5 4669 FBgn0026181 1648.443333 28.48333333 43.82 0.039127824 2.264482153 1.471930625 -6 -6 -6 0.1 dme-bantam-3p 6mer3-8 TGATCT X 1662652 1662657 + X_1662652_1662657_+ 0.984273003 0.983245655 0.983759329 0.000726411 br FBtr0070265|FBtr0303562 1659601|1654641 1664869|1664869 X + 1662617 1662671 3'utr br FlyBase G58016.1 GAAAACGAAAAATAATGCAAATGCAAAACAAACTGTGATCTTACAAGTTTTTGAA 37 1662657 0.956516728 5 34 175 0.93877551 1.361727836 0 0.216216216 0.408163265 37 2 1 46 X:1662617-1662671 6 br FBtr0070265|FBtr0303562 1659601|1654641 1664869|1664869 TGATCT 6mer3-8 dme-bantam-3p X + 1662634 1662660 3'utr br FlyBase G43891.1 CAAATGCAAAACAAACTGTGATCTTAC 19 1662657 0.698437328 4 18 87 0.96 1.380211242 0 0.157894737 0.36 19 1 0 24 X:1662634-1662660 6 26.5 4670 FBgn0000210 1688.696667 27.97 43.00333333 0.015692576 0.94744369 0.6162313 -5 -5 -5 0.1 dme-miR-305-5p 8mer-m1 AGTACAAT X 16649157 16649164 + X_16649157_16649164_+ 0.507109682 0.545059105 0.526084394 0.026834278 mthl1 FBtr0074314|FBtr0340150 16643506|16643506 16649697|16650309 X + 16649119 16649168 3'utr mthl1 FlyBase G62241.1 ATGTATTTTAGCTCTTGAAAACGCAGAAACTACAATGCAGTACAATTATT 10 16649155 0.964380718 4 9 49 0.923076923 1.079181246 0 0.2 0.384615385 10 1 0 12 X:16649119-16649168 8 mthl1 FBtr0340150|FBtr0074314 16643506|16643506 16650309|16649697 AGTACAAT 8mer-m1 dme-miR-305-5p X + 16649082 16649182 3'utr mthl1 FlyBase G46998.1 GAGATGTATTCCCCCTCCCAATTACAAACGTATTTTTATGTATTTTAGCTCTTGAAAACGCAGAAACTACAATGCAGTACAATTATTATTTCTCATAAGAT 15 16649154 0.972312921 7 15 95 1 1.447158031 0 0.266666667 0.607142857 15 0 0 28 X:16649082-16649182 8 10 4671 FBgn0030766 372.0033333 8.846666667 13.59666667 0.02688148 1.130369254 0.735474381 2 3 2.5 0.1 dme-miR-980-5p 7mer-A1 AAAAACA X 16653227 16653233 - X_16653227_16653233_- 0.45714988 0.781671348 0.619410614 0.229471283 CG9723 FBtr0074376 16653218 16653435 X - 16653220 16653320 3'utr CG9723 FlyBase G68244.1 AATATTTGTATAATCACTTGCAGACTGAACGGAAACACACATATTAATACAAATTATATATTTAATTATTCATGACTGGCTAGGAATAAAAACACTTATAC 83 16653249 0.942758062 15 70 496 0.81443299 1.2955671 0 0.13253012 0.257731959 83 15 3 79 X:16653220-16653320 7 CG9723 FBtr0074376 16653218 16653435 AAAAACA 7mer-A1 dme-miR-980-5p X - 16653228 16653267 3'utr CG9723 FlyBase G51359.1 TTATATATTTAATTATTCATGACTGGCTAGGAATAAAAAC 43 16653249 0.654258192 8 33 286 0.825396825 1.414973348 0 0.372093023 0.571428571 43 10 1 52 X:16653228-16653267 5 42.5 4672 FBgn0030768 232.3333333 16.26666667 24.68666667 0.182926829 2.612704918 1.7215771 16 16 16 0.1 dme-miR-305-3p 6mer2-7 TGTGCC X 1672884 1672889 + X_1672884_1672889_+ 0.942104729 0.99993796 0.971021345 0.040894319 hfw FBtr0070270|FBtr0333115 1672755|1672755 1673110|1673608 X + 1672794 1672911 3'utr hfw FlyBase G58037.2 AGACGGCCAGACTGTGACACAATCACATGACAGAGCGTATTCTCATACGTGTCCTACCTTTATATGTATCCGACTGTATCTGCGGAACCGTGTGCCTTCTATATTCATACATATGTGA 19 1672884 0.999979641 7 11 79 0.857142857 0.77815125 0.19047619 0.105263158 0.19047619 19 1 2 18 X:1672794-1672911 6 hfw FBtr0070270|FBtr0333115 1672755|1672755 1673110|1673608 TGTGCC 6mer2-7 dme-miR-305-3p X + 1672859 1672894 3'utr hfw FlyBase G43900.1 GTATCCGACTGTATCTGCGGAACCGTGTGCCTTCTA 8 1672870 0.696860347 4 8 39 1 1.176091259 0.333333333 0.375 0.666666667 8 0 0 15 X:1672859-1672894 6 5.5 4673 FBgn0001189 807.7733333 37.06333333 56.35333333 0.006808841 0.14839464 0.097598486 0 14 7 0.1 dme-miR-34-5p 7mer-m8 CACTGCC X 1673484 1673490 + X_1673484_1673490_+ 0.706116686 0.708948244 0.707532465 0.002002173 hfw FBtr0333115 1672755 1673608 X + 1673445 1673506 3'utr hfw FlyBase G58040.1 TTAAATATGTTGACTTGGTATTATTAGGGGACTCTTTAACACTGCCTTTCGCATAGGTTGTT 38 1673492 0.764482353 9 37 326 1 1.612783857 0.195121951 0.052631579 0.12195122 38 0 0 41 X:1673445-1673506 7 hfw FBtr0333115 1672755 1673608 CACTGCC 7mer-m8 dme-miR-34-5p X + 1673416 1673504 3'utr hfw FlyBase G43904.1 TGGCCACGTGCCCTGGTTTAACTTTATACTTAAATATGTTGACTTGGTATTATTAGGGGACTCTTTAACACTGCCTTTCGCATAGGTTG 30 1673492 0.986820923 12 29 256 0.975609756 1.602059991 0.219512195 0.333333333 0.512195122 30 1 0 40 X:1673416-1673504 7 26.5 4674 FBgn0001189 807.7733333 37.06333333 56.35333333 0.032806233 0.714992355 0.470247249 -8 -8 -8 0.1 dme-miR-8-3p 8mer-A1 CAGTATTA X 1674224 1674231 - X_1674224_1674231_- 0.671698098 0.67169745 0.671697774 4.95E-07 CG32809 FBtr0308321|FBtr0333117|FBtr0333120|FBtr0333118|FBtr0308323|FBtr0333119|FBtr0308324 1673336|1673108|1673336|1673336|1673336|1673336|1673336 1675880|1675880|1675880|1677054|1675880|1675880|1677238 X - 1674202 1674267 3'utr CG32809 FlyBase G64043.1 ATTTGTTAACCTTACTGCCCGGCCAGTATTAGACTTCAGTATTATAGGCTAATTTACATTTAAATA 41 1674232 0.884651353 10 37 364 0.93877551 1.662757832 0.142857143 0.146341463 0.285714286 41 3 0 46 X:1674202-1674267 8 CG32809 FBtr0333120|FBtr0333117|FBtr0308321|FBtr0308324|FBtr0333119|FBtr0308323|FBtr0333118 1673336|1673108|1673336|1673336|1673336|1673336|1673336 1675880|1675880|1675880|1677238|1675880|1675880|1677054 CAGTATTA 8mer-A1 dme-miR-8-3p X - 1674179 1674282 3'utr CG32809 FlyBase G48272.1 CGTGCACACACATAGATTTGTTAACCTTACTGCCCGGCCAGTATTAGACTTCAGTATTATAGGCTAATTTACATTTAAATAAACTTGTAACACACGACTTGAGA 28 1674232 0.990554333 13 23 235 0.863636364 1.278753601 0.25 0.392857143 0.613636364 28 5 1 38 X:1674179-1674282 8 25 4675 FBgn0023531 281.8933333 6.233333333 9.576666667 0.088686028 4.010695187 2.61051166 1 1 1 0.1 dme-miR-14-3p 7mer-A1 AGACTGA X 1674797 1674803 - X_1674797_1674803_- 0.7575587 0.76361605 0.760587375 0.004283158 CG32809 FBtr0308321|FBtr0333117|FBtr0333120|FBtr0333118|FBtr0308323|FBtr0333119|FBtr0308324 1673336|1673108|1673336|1673336|1673336|1673336|1673336 1675880|1675880|1675880|1677054|1675880|1675880|1677238 X - 1674770 1674827 3'utr CG32809 FlyBase G64044.1 ATTATTACCTTGGTATGGGACGTGAGACTGATAGTTCTATATATGTAGCTCATCAAGA 150 1674805 0.963442001 9 148 1182 0.993975904 2.217483944 0.409638554 0.093333333 0.180722892 150 1 0 165 X:1674770-1674827 7 CG32809 FBtr0333120|FBtr0333117|FBtr0308321|FBtr0308324|FBtr0333119|FBtr0308323|FBtr0333118 1673336|1673108|1673336|1673336|1673336|1673336|1673336 1675880|1675880|1675880|1677238|1675880|1675880|1677054 AGACTGA 7mer-A1 dme-miR-14-3p X - 1674779 1674826 3'utr CG32809 FlyBase G48273.1 TTATTACCTTGGTATGGGACGTGAGACTGATAGTTCTATATATGTAGC 102 1674805 0.957475816 6 95 848 0.90625 1.860338007 0.4375 0.421568627 0.63125 102 14 1 145 X:1674779-1674826 7 124.5 4676 FBgn0023531 281.8933333 6.233333333 9.576666667 0.441656419 19.97326203 13.00034807 2 2 2 0.1 dme-miR-282-5p 8mer-A1 AGAGGCTA X 16785427 16785434 - X_16785427_16785434_- 0.632456011 0.636211214 0.634333613 0.002655327 CG9609 FBtr0074356 16785113 16785478 X - 16785376 16785460 3'utr CG9609 FlyBase G68258.1 GGGACGGGAGTGAGAAGGTCTGGTCAAGAGGCTAACAATTGAATGACTACTTTAATTTAAACCACAACTTCTAAAAGAGAAACAA 28 16785438 0.967379161 10 26 140 0.933333333 1.447158031 0.366666667 0.035714286 0.1 28 2 0 28 X:16785376-16785460 8 CG9609 FBtr0074356 16785113 16785478 AGAGGCTA 8mer-A1 dme-miR-282-5p X - 16785390 16785456 3'utr CG9609 FlyBase G51372.1 CGGGAGTGAGAAGGTCTGGTCAAGAGGCTAACAATTGAATGACTACTTTAATTTAAACCACAACTTC 18 16785439 0.959681276 7 16 87 0.92 1.361727836 0.6 0.222222222 0.44 18 2 0 23 X:16785390-16785456 8 17.5 4677 FBgn0030787 206.1233333 13.74333333 21.09 0.084900626 1.273344652 0.829777146 4 5 4.5 0.1 dme-miR-14-3p 7mer-A1 AGACTGA X 16789595 16789601 + X_16789595_16789601_+ 0.823349536 0.82334956 0.823349548 7.07E-08 Sap30 FBtr0074331|FBtr0344089 16788694|16788694 16789644|16789644 X + 16789562 16789616 3'utr Sap30 FlyBase G62279.1 GAATTACGCATTAAACGATTTATGTTAAAGCCTAGACTGATTTTAGCCATACATA 29 16789603 0.979262646 8 29 200 1 1.544068044 0.2 0.172413793 0.314285714 29 0 0 35 X:16789562-16789616 7 Sap30 FBtr0344089|FBtr0074331 16788694|16788694 16789644|16789644 AGACTGA 7mer-A1 dme-miR-14-3p X + 16789550 16789617 3'utr Sap30 FlyBase G47024.1 ACAAATCAATTGGAATTACGCATTAAACGATTTATGTTAAAGCCTAGACTGATTTTAGCCATACATAT 22 16789602 0.9864013 6 18 148 0.8125 0.937852093 0.09375 0.318181818 0.53125 22 4 2 26 X:16789550-16789617 7 24.5 4678 FBgn0030788 191.5866667 13.93666667 21.27333333 0.127879463 1.757952643 1.15167659 -8 -7 -7.5 0.1 dme-miR-999-3p 6mer3-8 AGTTAA X 16789653 16789658 - X_16789653_16789658_- 0.617664302 0.999972141 0.808818222 0.270332438 Rrp45 FBtr0074355|FBtr0344090 16789451|16789403 16789676|16789676 X - 16789635 16789690 stop_codon Rrp45 FlyBase G68264.1 AGCGATACATCTAGCCGTTGTGATAGTCGTGTAGTTAAGAGAAAATGCTTTCTATT 17 16789673 0.893303129 9 15 128 0.888888889 1.204119983 0.277777778 0.058823529 0.111111111 17 2 0 16 X:16789635-16789690 6 Rrp45 FBtr0344090|FBtr0074355 16789403|16789451 16789676|16789676 AGTTAA 6mer3-8 dme-miR-999-3p X - 16789635 16789691 stop_codon Rrp45 FlyBase G51375.1 AAGCGATACATCTAGCCGTTGTGATAGTCGTGTAGTTAAGAGAAAATGCTTTCTATT 15 16789673 0.701994757 8 15 118 1 1.322219295 0.095238095 0.333333333 0.523809524 15 0 0 21 X:16789635-16789691 6 10.5 4679 FBgn0030789 279.4133333 21.54333333 33.24666667 0.037578736 0.487389757 0.315821135 15 15 15 0.1 dme-miR-92b-3p 7mer-m1 TGCAATT X 16795331 16795337 + X_16795331_16795337_+ 0.765576577 0.746089443 0.75583301 0.013779531 CG4768 FBtr0074332|FBtr0347029|FBtr0305899 16795317|16795317|16795317 16796023|16797742|16796756 X + 16795322 16795407 3'utr CG4768 FlyBase G62286.1 ACAAGCAATTGCAATTGCGATCCCAGCCCAAAGCCAAGCTCCCGGTCACTAGGACACCATCTAGCTACTCCACCTCGTCTGATTAA 18 16795337 0.945019067 9 16 92 0.909090909 1.301029996 0.136363636 0.166666667 0.318181818 18 2 0 20 X:16795322-16795407 7 CG4768 FBtr0305899|FBtr0074332|FBtr0347029 16795317|16795317|16795317 16796756|16796023|16797742 TGCAATT 7mer-m1 dme-miR-92b-3p X + 16795267 16795454 stop_codon CG4768 FlyBase G47028.1 CGACAAAATGGACATTTGCCACTACAGTAGTAAACGCCAGCGCTTCATGTAATCCACAAGCAATTGCAATTGCGATCCCAGCCCAAAGCCAAGCTCCCGGTCACTAGGACACCATCTAGCTACTCCACCTCGTCTGATTAAAAATGAAAATGGAAATGAAAAGGAAAAATATAAAGGCCACTGCGAGC 29 16795337 0.959479877 15 26 126 0.955555556 1.33243846 0.222222222 0.448275862 0.644444444 29 1 1 43 X:16795267-16795454 7 6.5 4680 FBgn0030790 591.9266667 27.66333333 42.73 0.01098109 0.234968068 0.15211795 -6 -6 -6 0.1 dme-miR-1008-3p 7mer-m8 AGCTGTG X 16795818 16795824 + X_16795818_16795824_+ 0.671789871 0.671794778 0.671792324 3.46E-06 CG4768 FBtr0074332|FBtr0347029|FBtr0305899 16795317|16795317|16795317 16796023|16797742|16796756 X + 16795702 16795875 3'utr CG4768 FlyBase G62289.1 AAGATGTTTATGTTATAAGGATAATGCCGATGGTGGGCACAAACTGTTAATCATTGTCATCATGCATTAATGCGAACGGAGTGAAAAGCTTAGGAGTACGATATCTGTTATATGCCAGCTGTGCGTCTGATTTACGATTACGATTAAGCGAAGCAGTAATAGTGAATGGTATTG 46 16795821 0.98572663 19 44 352 0.961538462 1.698970004 0.134615385 0.130434783 0.230769231 46 2 0 50 X:16795702-16795875 7 CG4768 FBtr0305899|FBtr0074332|FBtr0347029 16795317|16795317|16795317 16796756|16796023|16797742 AGCTGTG 7mer-m8 dme-miR-1008-3p X + 16795656 16795834 3'utr CG4768 FlyBase G47029.1 TTGATAGCACTTAAGAAAAAAGTCATGTCGATTGTAATGACACCAGAAGATGTTTATGTTATAAGGATAATGCCGATGGTGGGCACAAACTGTTAATCATTGTCATCATGCATTAATGCGAACGGAGTGAAAAGCTTAGGAGTACGATATCTGTTATATGCCAGCTGTGCGTCTGATTT 38 16795822 0.986139149 16 35 286 0.93220339 1.263241435 0.050847458 0.447368421 0.644067797 38 2 2 55 X:16795656-16795834 7 25.5 4681 FBgn0030790 591.9266667 27.66333333 42.73 0.043079661 0.921797807 0.596770419 -3 -4 -3.5 0.1 dme-miR-1008-3p 7mer-m8 AGCTGTG X 16795949 16795955 + X_16795949_16795955_+ 0.671795831 0.671795767 0.671795799 0 CG4768 FBtr0074332|FBtr0347029|FBtr0305899 16795317|16795317|16795317 16796023|16797742|16796756 X + 16795923 16795970 3'utr CG4768 FlyBase G62290.1 TTTTGCATTATGCAAACGACAAATGAAGCTGTGTAAATAACAACAAAA 48 16795946 0.875741007 4 44 204 0.945454545 1.238882089 0 0.125 0.236363636 48 1 2 52 X:16795923-16795970 7 CG4768 FBtr0305899|FBtr0074332|FBtr0347029 16795317|16795317|16795317 16796756|16796023|16797742 AGCTGTG 7mer-m8 dme-miR-1008-3p X + 16795923 16795970 3'utr CG4768 FlyBase G47031.1 TTTTGCATTATGCAAACGACAAATGAAGCTGTGTAAATAACAACAAAA 31 16795946 0.909399037 4 29 134 0.968253968 1.484299839 0.015873016 0.548387097 0.777777778 31 1 1 61 X:16795923-16795970 7 38 4682 FBgn0030790 591.9266667 27.66333333 42.73 0.064197142 1.373659477 0.889304938 3 3 3 0.1 dme-miR-307a-3p 6mer3-8 GGTTGT X 16798265 16798270 - X_16798265_16798270_- 0.999980855 0.999999999 0.999990427 1.35E-05 CG9132 FBtr0074353|FBtr0074354|FBtr0306801 16796900|16797514|16797514 16798632|16798632|16798632 X - 16798250 16798359 3'utr CG9132 FlyBase G68271.1 CGTAGTTGCATCTCGCTCTAATTGAAGGAGTACGATGAGCGTGGGCAGAGTTCTCAGTGGGCGGGGATCTGTAGCGAACTATTTAGCCTGGTTGTTAATTGTATAAGTCA 38 16798277 0.935865827 13 31 257 0.829268293 1.230448921 0.390243902 0.078947368 0.146341463 38 6 1 34 X:16798250-16798359 6 CG9132 FBtr0306801|FBtr0074353|FBtr0074354 16797514|16796900|16797514 16798632|16798632|16798632 GGTTGT 6mer3-8 dme-miR-307a-3p X - 16798251 16798290 3'utr CG9132 FlyBase G51377.1 TGTAGCGAACTATTTAGCCTGGTTGTTAATTGTATAAGTC 13 16798271 0.77572534 5 13 126 1 1.301029996 0.05 0.384615385 0.6 13 0 0 20 X:16798251-16798290 6 14 4683 FBgn0030791 552.37 33.83666667 51.63333333 0.02534533 0.41375234 0.271142673 7 1 4 0.1 dme-miR-276a-3p 6mer2-7 GTTCCT X 16798613 16798618 - X_16798613_16798618_- 0.999999865 1 0.999999932 7.07E-08 CG9132 FBtr0074353|FBtr0074354|FBtr0306801 16796900|16797514|16797514 16798632|16798632|16798632 X - 16798560 16798628 3'utr CG9132 FlyBase G68273.1 ACATCATCCTGTTCCTCCTGCTGCTGCTGCTGCTGCGCTCCTATCACCCAGAACTTTATGTTTTAAGAC 19 16798619 0.765540447 8 17 152 0.888888889 0.903089987 0.074074074 0.315789474 0.518518519 19 1 2 24 X:16798560-16798628 6 CG9132 FBtr0306801|FBtr0074353|FBtr0074354 16797514|16796900|16797514 16798632|16798632|16798632 GTTCCT 6mer2-7 dme-miR-276a-3p X - 16798583 16798635 stop_codon CG9132 FlyBase G51379.1 TAGATATACATCATCCTGTTCCTCCTGCTGCTGCTGCTGCTGCGCTCCTATCA 7 16798621 0.91438085 5 6 48 0.777777778 0.84509804 0.222222222 0.285714286 0.444444444 7 2 0 7 X:16798583-16798635 6 8 4684 FBgn0030791 552.37 33.83666667 51.63333333 0.014483046 0.236429908 0.15493867 1 3 2 0.1 dme-bantam-3p 6mer2-7 GATCTC X 16805519 16805524 + X_16805519_16805524_+ 0.998445467 0.984066306 0.991255886 0.01016763 CG13005 FBtr0074334 16805279 16805754 X + 16805505 16805535 3'utr CG13005 FlyBase G62303.1 AATATAGAAATAGGGATCTCTTAGATACATT 16 16805525 0.627584525 4 16 81 1 1.278753601 0.105263158 0.1875 0.315789474 16 0 0 19 X:16805505-16805535 6 CG13005 FBtr0074334 16805279 16805754 GATCTC 6mer2-7 dme-bantam-3p X + 16805500 16805531 3'utr CG13005 FlyBase G47040.1 ATGTAAATATAGAAATAGGGATCTCTTAGATA 10 16805525 0.661427968 3 10 51 1 1.041392685 0 0.1 0.181818182 10 0 0 11 X:16805500-16805531 6 12.5 4685 FBgn0030794 55.71666667 3.37 5.173333333 0.224349387 3.709198813 2.416237113 -6 -6 -6 0.1 dme-miR-304-5p 8mer-A1 TGAGATTA X 16826266 16826273 + X_16826266_16826273_+ 0.618472677 0.618866112 0.618669394 0.000278176 CG4829 FBtr0335278|FBtr0112994|FBtr0074336|FBtr0112995|FBtr0074338|FBtr0074337 16826137|16826137|16826137|16826137|16826137|16826137 16826494|16826494|16826494|16826494|16826494|16826494 X + 16826242 16826291 3'utr CG4829 FlyBase G62306.1 CACACACGCACGGAAACATTGCATTGAGATTAGAGTAGAACTGCCCGAAA 27 16826265 0.971224266 5 27 157 1 1.431363764 0.444444444 0 0 27 0 0 27 X:16826242-16826291 8 CG4829 FBtr0074338|FBtr0074337|FBtr0074336|FBtr0112995|FBtr0335278|FBtr0112994 16826137|16826137|16826137|16826137|16826137|16826137 16826494|16826494|16826494|16826494|16826494|16826494 TGAGATTA 8mer-A1 dme-miR-304-5p X + 16826241 16826285 3'utr CG4829 FlyBase G47043.1 ACACACACGCACGGAAACATTGCATTGAGATTAGAGTAGAACTGC 21 16826265 0.968202391 4 21 117 1 1.579783597 0.394736842 0.571428571 0.763157895 21 0 0 38 X:16826241-16826285 8 24 4686 FBgn0030796 2560.61 104.38 159.97 0.009372767 0.229929105 0.15002813 1 1 1 0.1 dme-miR-190-5p 7mer-A1 CATATCA X 16826932 16826938 - X_16826932_16826938_- 0.577356203 0.689918683 0.633637443 0.079593707 CG13004 FBtr0112996|FBtr0308682|FBtr0074351 16826679|16826679|16826679 16827398|16827398|16827398 X - 16826922 16827010 3'utr CG13004 FlyBase G68281.3 TGAAACGCACAGCATCTAGTCCAAAGTTGTATATAGCCGAAAAAGAAATAACGGAACCACACATGATGCGCTCATATCAGTTTTAAACA 134 16826946 0.881139966 8 131 525 0.974683544 1.886490725 0.202531646 0.171641791 0.297468354 134 3 1 154 X:16826922-16827010 7 CG13004 FBtr0112996|FBtr0074351|FBtr0308682 16826679|16826679|16826679 16827398|16827398|16827398 CATATCA 7mer-A1 dme-miR-190-5p X - 16826923 16826968 3'utr CG13004 FlyBase G51384.1 AAGAAATAACGGAACCACACATGATGCGCTCATATCAGTTTTAAAC 51 16826946 0.922457408 3 51 181 1 1.903089987 0.25 0.450980392 0.65 51 0 0 80 X:16826923-16826968 7 75 4687 FBgn0030797 333.0633333 17.96666667 27.55 0.225182398 4.174397032 2.722323049 8 8 8 0.1 dme-miR-304-5p 6mer2-7 GAGATT X 16827323 16827328 - X_16827323_16827328_- 0.990785736 0.994349546 0.992567641 0.002519987 CG13004 FBtr0112996|FBtr0308682|FBtr0074351 16826679|16826679|16826679 16827398|16827398|16827398 X - 16827252 16827391 3'utr CG13004 FlyBase G68283.1 GTGGTGGCGAGGGAGGGAGTTGAATGGAACTAATGGAGCAGTAGATGGAGGAGAGAGAATTAAGAGATTTTTTCCCAACTGGCAGCGCAACGGATTTCTGTACTTGACCCACTTAAAATAACCATATGCAAAAAAAACTG 633 16827321 0.983165853 23 560 4273 0.882014388 1.833217965 0.381294964 0.088467615 0.169784173 633 74 8 613 X:16827252-16827391 6 CG13004 FBtr0112996|FBtr0074351|FBtr0308682|FBtr0304152 16826679|16826679|16826679|16827115 16827398|16827398|16827398|16827398 GAGATT 6mer2-7 dme-miR-304-5p X - 16827224 16827389 3'utr CG13004 FlyBase G51388.1 GGTGGCGAGGGAGGGAGTTGAATGGAACTAATGGAGCAGTAGATGGAGGAGAGAGAATTAAGAGATTTTTTCCCAACTGGCAGCGCAACGGATTTCTGTACTTGACCCACTTAAAATAACCATATGCAAAAAAAACTGTAACAACGACATCGATAAGTGGTGTTCT 394 16827321 0.980725651 21 350 2543 0.881602914 1.906694111 0.43715847 0.314720812 0.508196721 394 60 5 484 X:16827224-16827389 6 394.5 4688 FBgn0030797 333.0633333 17.96666667 27.55 1.184459412 21.95732839 14.31941924 -7 -7 -7 0.1 dme-miR-999-3p 8mer-A1 AGTTAACA X 16885831 16885838 + X_16885831_16885838_+ 0.641758704 0.643722026 0.642740365 0.001388263 Rcp FBtr0074341 16885515 16885859 X + 16885804 16885846 3'utr Rcp FlyBase G62309.1 GGAACAGACAGGGAATGTATTATGCTTAGTTAACAATAAAGCT 11 16885823 0.98298179 2 11 86 1 1.041392685 0 0 0 11 0 0 11 X:16885804-16885846 8 Rcp FBtr0074341 16885515 16885859 AGTTAACA 8mer-A1 dme-miR-999-3p X + 16885802 16885839 3'utr Rcp FlyBase G47046.1 CTGGAACAGACAGGGAATGTATTATGCTTAGTTAACAA 6 16885823 0.983245378 3 6 46 1 1.079181246 0 0.833333333 0.916666667 6 0 0 12 X:16885802-16885839 8 7.5 4689 FBgn0030801 124.5266667 14.28333333 21.93 0.060228064 0.525087515 0.341997264 8 8 8 0.1 dme-miR-184-5p 6mer3-8 TGATAA X 16888280 16888285 + X_16888280_16888285_+ 0.999989552 1 0.999994776 7.35E-06 CG4880 FBtr0074342|FBtr0310519 16888233|16888233 16888729|16888597 X + 16888251 16888289 3'utr CG4880 FlyBase G62315.1 ACGTTTTAGACAATTCTGCAAACCAGTCGTGATAAATTT 12 16888277 0.968174902 5 11 67 0.846153846 1.041392685 0 0.083333333 0.153846154 12 2 0 11 X:16888251-16888289 6 CG4880 FBtr0074342|FBtr0310519 16888233|16888233 16888729|16888597 TGATAA 6mer3-8 dme-miR-184-5p X + 16888251 16888290 3'utr CG4880 FlyBase G47049.1 ACGTTTTAGACAATTCTGCAAACCAGTCGTGATAAATTTA 8 16888278 0.781788114 5 8 58 1 1.146128036 0 0.5 0.714285714 8 0 0 14 X:16888251-16888290 6 9 4690 FBgn0030803 567.3333333 44.24666667 68.27666667 0.01586369 0.203405153 0.131816628 3 2 2.5 0.1 dme-miR-317-3p 6mer3-8 TGTGTT X 16937154 16937159 + X_16937154_16937159_+ 0.999999998 1 0.999999999 0 CG4928 FBtr0074345|FBtr0074344 16936676|16936676 16938209|16937411 X + 16937144 16937178 5'utr CG4928 FlyBase G62329.1 AAATCCTTTGTGTGTTAGTCTAGGTGTAAGCACAC 5 16937157 0.720739342 3 4 41 1 0.84509804 0.285714286 0.2 0.428571429 5 0 0 7 X:16937144-16937178 6 CG4928 FBtr0074345|FBtr0074344 16936676|16936676 16938209|16937411 TGTGTT 6mer3-8 dme-miR-317-3p X + 16937141 16937171 5'utr CG4928 FlyBase G47056.1 TGCAAATCCTTTGTGTGTTAGTCTAGGTGTA 5 16937156 0.630679204 4 4 42 0.833333333 0.698970004 0.833333333 0.2 0.333333333 5 1 0 5 X:16937141-16937171 6 4 4691 FBgn0027556 126.41 4.513333333 6.916666667 0.031643066 0.886262925 0.578313253 -3 -2 -2.5 0.1 dme-miR-1003-3p 7mer-A1 TGTGAGA X 16938168 16938174 + X_16938168_16938174_+ 0.823335727 0.823342767 0.823339247 5.02E-06 CG4928 FBtr0074345 16936676 16938209 X + 16938138 16938185 3'utr CG4928 FlyBase G62332.1 AATGGAAAAAATACACGCACATAACAAATTTGTGAGAAAAAAAATTAC 13 16938167 0.948106588 4 12 48 0.9375 1.176091259 0 0.230769231 0.375 13 1 0 15 X:16938138-16938185 7 CG4928 FBtr0074345 16936676 16938209 TGTGAGA 7mer-A1 dme-miR-1003-3p X + 16938152 16938183 3'utr CG4928 FlyBase G47058.1 ACGCACATAACAAATTTGTGAGAAAAAAAATT 12 16938166 0.919781942 2 12 49 1 1.278753601 0 0.333333333 0.578947368 12 0 0 19 X:16938152-16938183 7 11.5 4692 FBgn0027556 126.41 4.513333333 6.916666667 0.090973815 2.548005908 1.662650602 1 2 1.5 0.1 dme-miR-14-3p 7mer-m8 AAGACTG X 16938531 16938537 - X_16938531_16938537_- 0.666084953 0.662915729 0.664500341 0.002241034 wus FBtr0074418|FBtr0342974 16938494|16938242 16938752|16938752 X - 16938506 16938593 3'utr wus FlyBase G68308.1 TAGCTGTATCTGTTTCCACATGTATTTATTACCATAAATCTGCGTTGTTTATTGTCAAGACTGTGTTTAAAAATATTAAAGCACCCCA 7 16938555 0.986654004 5 7 73 1 1 0.1 0.285714286 0.5 7 0 0 10 X:16938506-16938593 7 wus FBtr0074418|FBtr0342974 16938494|16938242 16938752|16938752 AAGACTG 7mer-m8 dme-miR-14-3p X - 16938523 16938555 3'utr wus FlyBase G51402.1 TCTGCGTTGTTTATTGTCAAGACTGTGTTTAAA 5 16938530 0.805695826 2 5 48 1 0.698970004 0.2 0 0 5 0 0 5 X:16938523-16938555 7 4 4693 FBgn0030805 139 7.906666667 12.04333333 0.028776978 0.505902192 0.332133961 18 -7 5.5 0.1 dme-miR-277-3p 7mer-m8 TGCATTT X 16955511 16955517 + X_16955511_16955517_+ 0.62020408 0.620204265 0.620204172 1.41E-07 RhoGAP15B FBtr0110990|FBtr0290096 16955463|16955463 16955995|16956234 X + 16955459 16955572 stop_codon RhoGAP15B FlyBase G62359.1 AAGTAGAAGTGCCCTCTCCCAGCTGCCAAACATAGATTTAACCGCCGTCTTGTGCATTTTTCTGTAGATATTCTGAATTTATTCGCAATATTAGGGAATATATACGTTTAGCAA 51 16955508 0.901497505 19 49 495 0.952380952 1.77815125 0.238095238 0.176470588 0.333333333 51 3 0 60 X:16955459-16955572 7 RhoGAP15B FBtr0290096|FBtr0110990 16955463|16955463 16956234|16955995 TGCATTT 7mer-m8 dme-miR-277-3p X + 16955464 16955600 3'utr RhoGAP15B FlyBase G47072.1 GAAGTGCCCTCTCCCAGCTGCCAAACATAGATTTAACCGCCGTCTTGTGCATTTTTCTGTAGATATTCTGAATTTATTCGCAATATTAGGGAATATATACGTTTAGCAATATTTTTACGAACAATTTCGGGAATTTT 36 16955508 0.989428055 14 32 353 0.927272727 1.40654018 0.145454545 0.416666667 0.618181818 36 3 1 51 X:16955464-16955600 7 31.5 4694 FBgn0030808 1485.72 31.16 47.79666667 0.021201842 1.010911425 0.659041774 3 3 3 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 16955677 16955682 + X_16955677_16955682_+ 1 1 1 0 RhoGAP15B FBtr0110990|FBtr0290096 16955463|16955463 16955995|16956234 X + 16955657 16955694 3'utr RhoGAP15B FlyBase G62360.1 ATAATCACGTTTGATCAAATACCAAATTGTACATAAGC 15 16955684 0.62908066 5 14 92 0.941176471 1.204119983 0.058823529 0.133333333 0.235294118 15 1 0 16 X:16955657-16955694 6 RhoGAP15B FBtr0290096|FBtr0110990 16955463|16955463 16956234|16955995 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 16955648 16955697 3'utr RhoGAP15B FlyBase G47073.1 TTTCTGTAAATAATCACGTTTGATCAAATACCAAATTGTACATAAGCTTA 10 16955684 0.981726887 5 10 74 1 1.255272505 0.055555556 0.6 0.777777778 10 0 0 18 X:16955648-16955697 6 12.5 4695 FBgn0030808 1485.72 31.16 47.79666667 0.008413429 0.401155327 0.261524514 -7 -7 -7 0.1 dme-miR-190-5p 8mer-m1 ACATATCT X 16955758 16955765 + X_16955758_16955765_+ 0.5690621 0.5497889 0.5594255 0.01362821 RhoGAP15B FBtr0110990|FBtr0290096 16955463|16955463 16955995|16956234 X + 16955720 16955770 3'utr RhoGAP15B FlyBase G62361.1 AGTATATGCCCTTTGTCTTCAACATAGCTCGATATCTGACATATCTAGTGT 15 16955745 0.986126358 6 9 116 0.666666667 0.77815125 0.222222222 0.133333333 0.277777778 15 5 1 12 X:16955720-16955770 8 RhoGAP15B FBtr0290096|FBtr0110990 16955463|16955463 16956234|16955995 ACATATCT 8mer-m1 dme-miR-190-5p X + 16955713 16955779 3'utr RhoGAP15B FlyBase G47074.1 ATATCTAAGTATATGCCCTTTGTCTTCAACATAGCTCGATATCTGACATATCTAGTGTTTATCTACA 18 16955732 0.984737045 8 10 136 0.615384615 0.602059991 0.230769231 0.333333333 0.538461538 18 7 3 16 X:16955713-16955779 8 8 4696 FBgn0030808 1485.72 31.16 47.79666667 0.005384595 0.256739409 0.167375689 13 26 19.5 0.1 dme-miR-283-5p 7mer-m8 TGATATT X 16956237 16956243 - X_16956237_16956243_- 0.60370427 0.617257538 0.610480904 0.00958356 CG9086 FBtr0346190 16956230 16957493 X - 16956234 16956262 3'utr CG9086 FlyBase G68314.1 AATAAATGCAACATTTTAGTGATATTCAA 14 16956248 0.72033572 6 13 107 0.947368421 1.255272505 0.210526316 0.285714286 0.473684211 14 1 0 18 X:16956234-16956262 7 CG9086 FBtr0346190 16956230 16957493 TGATATT 7mer-m8 dme-miR-283-5p X - 16956235 16956260 3'utr CG9086 FlyBase G51405.1 TAAATGCAACATTTTAGTGATATTCA 13 16956247 0.694127278 3 13 97 1 1.204119983 0.25 0.230769231 0.375 13 0 0 16 X:16956235-16956260 7 12.5 4697 FBgn0030809 889.67 15.31666667 23.47 0.014050153 0.816104461 0.532594802 5 4 4.5 0.1 dme-miR-13b-2-5p 6mer3-8 TTTGAC X 16956622 16956627 - X_16956622_16956627_- 0.999999819 1 0.99999991 1.41E-07 CG9086 FBtr0346190 16956230 16957493 X - 16956529 16956639 3'utr CG9086 FlyBase G68316.1 TTCAGAGCCCTGTTTGACATCCATCTCACTCTAACCCGAGGAACTCGATAATATTAGTCAAACCATGTTTACTTGATCAATATACTTAACACCCTATACGACTATATATTT 15 16956625 0.984174298 10 14 102 0.9375 1.176091259 0.25 0.066666667 0.125 15 1 0 15 X:16956529-16956639 6 CG9086 FBtr0346190 16956230 16957493 TTTGAC 6mer3-8 dme-miR-13b-2-5p X - 16956607 16956654 3'utr CG9086 FlyBase G51407.1 ACAGACACCCTCTCTTTCAGAGCCCTGTTTGACATCCATCTCACTCTA 5 16956626 0.964289719 4 5 27 1 0.903089987 0 0.4 0.625 5 0 0 8 X:16956607-16956654 6 6 4698 FBgn0030809 889.67 15.31666667 23.47 0.006744074 0.391730141 0.255645505 -2 -1 -1.5 0.1 dme-miR-308-3p 7mer-m1 TGTGATT X 16957424 16957430 - X_16957424_16957430_- 0.443131017 0.443131018 0.443131017 0 CG9086 FBtr0346190|FBtr0074415|FBtr0308839 16956230|16956943|16956943 16957493|16957493|16957493 X - 16957386 16957473 3'utr CG9086 FlyBase G68321.1 GGAAGCAGAGGACAGGCAGCAAAATGGAAATGGCGGCAGTCTATGTGATTATTACATACTAACATTAGGAGAGCCTATTTTTACGTCT 87 16957424 0.985897983 12 81 647 0.932038835 1.505149978 0.194174757 0.149425287 0.281553398 87 5 2 96 X:16957386-16957473 7 CG9086 FBtr0074415|FBtr0308839|FBtr0346190 16956943|16956943|16956230 16957493|16957493|16957493 TGTGATT 7mer-m1 dme-miR-308-3p X - 16957365 16957453 3'utr CG9086 FlyBase G51411.1 AAAATGGAAATGGCGGCAGTCTATGTGATTATTACATACTAACATTAGGAGAGCCTATTTTTACGTCTAAGCATTTTACTACTTATCCG 56 16957424 0.985419332 13 53 435 0.96 1.556302501 0.133333333 0.25 0.44 56 2 1 72 X:16957365-16957453 7 65.5 4699 FBgn0030809 889.67 15.31666667 23.47 0.073622804 4.276387378 2.790796762 -6 -6 -6 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA X 17070257 17070262 - X_17070257_17070262_- 0.979645807 0.99999665 0.989821228 0.014390189 CG8949 FBtr0074412|FBtr0304839|FBtr0304840|FBtr0310525|FBtr0330596|FBtr0310524 17069016|17069016|17068715|17069016|17069016|17069016 17070352|17070352|17070352|17070352|17070274|17070352 X - 17070232 17070268 3'utr CG8949 FlyBase G68349.1 TTGCGATGATGATTGGTCGATTGTGGCCGCCGTCAGC 14 17070248 0.608820179 5 13 74 0.928571429 0.812913357 0.642857143 0 0 14 0 1 13 X:17070232-17070268 6 CG8949 FBtr0330596|FBtr0310524|FBtr0304840|FBtr0310525|FBtr0074412|FBtr0304839 17069016|17069016|17068715|17069016|17069016|17069016 17070274|17070352|17070352|17070352|17070352|17070352 TGATGA 6mer3-8 dme-miR-2a-2-5p X - 17070231 17070273 3'utr CG8949 FlyBase G51431.1 GATGATTGCGATGATGATTGGTCGATTGTGGCCGCCGTCAGCA 12 17070255 0.618461745 5 12 71 1 1.176091259 0.533333333 0.25 0.4 12 0 0 15 X:17070231-17070273 6 7.5 4700 FBgn0030812 1434.423333 38.19666667 58.95666667 0.005228582 0.196352212 0.127212077 -14 -7 -10.5 0.1 dme-miR-14-3p 7mer-m8 AAGACTG X 17079812 17079818 + X_17079812_17079818_+ 0.671782683 0.671786993 0.671784838 3.04E-06 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 X + 17079767 17079843 3'utr CG4949 FlyBase G62366.1 AAAGCTGGAACGAATTTTCCAATCTCGAACGAATTTCGAGTTATTAAGACTGCATTTCCATTTTATTGACTTAAAGC 46 17079810 0.875800685 12 43 407 0.951612903 1.770852012 0.016129032 0.260869565 0.451612903 46 3 0 59 X:17079767-17079843 7 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 AAGACTG 7mer-m8 dme-miR-14-3p X + 17079797 17079844 3'utr CG4949 FlyBase G47078.1 GAATTTCGAGTTATTAAGACTGCATTTCCATTTTATTGACTTAAAGCT 22 17079810 0.988156665 7 21 191 0.931034483 0.954242509 0 0.318181818 0.482758621 22 0 2 27 X:17079797-17079844 7 29.5 4701 FBgn0030813 105.3333333 6.336666667 9.69 0.280063291 4.655444503 3.044375645 2 2 2 0.1 dme-miR-14-3p 6mer3-8 AAGACT X 17080072 17080077 + X_17080072_17080077_+ 0.999999993 1 0.999999997 0 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 X + 17080053 17080091 3'utr CG4949 FlyBase G62367.1 CGAATGCTCGATCAAATATAAGACTTTATTATAGTATAC 24 17080080 0.603818201 6 23 212 0.96875 1.190331698 0.03125 0.25 0.4375 24 0 1 31 X:17080053-17080091 6 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 AAGACT 6mer3-8 dme-miR-14-3p X + 17080045 17080091 3'utr CG4949 FlyBase G47079.1 GAAGCAATCGAATGCTCGATCAAATATAAGACTTTATTATAGTATAC 16 17080080 0.712191201 4 14 127 0.954545455 1.322219295 0.181818182 0.25 0.454545455 16 1 0 21 X:17080045-17080091 6 19 4702 FBgn0030813 105.3333333 6.336666667 9.69 0.180379747 2.998421883 1.960784314 -8 -8 -8 0.1 dme-miR-184-5p 6mer3-8 TGATAA X 17080134 17080139 + X_17080134_17080139_+ 0.986072408 0.999579158 0.992825783 0.00955075 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 X + 17080113 17080155 3'utr CG4949 FlyBase G62368.1 AAACTACCAAAAAAAAATTGCTGATAATTAATTATAATATACA 10 17080130 0.901672563 2 10 71 1 1.041392685 0 0.1 0.181818182 10 0 0 11 X:17080113-17080155 6 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 TGATAA 6mer3-8 dme-miR-184-5p X + 17080115 17080153 3'utr CG4949 FlyBase G47080.1 ACTACCAAAAAAAAATTGCTGATAATTAATTATAATATA 10 17080130 0.882737596 3 10 71 1 1.041392685 0 0.1 0.181818182 10 0 0 11 X:17080115-17080153 6 10 4703 FBgn0030813 105.3333333 6.336666667 9.69 0.094936709 1.578116781 1.031991744 4 4 4 0.1 dme-bantam-3p 8mer-A1 TGATCTCA X 17080449 17080456 + X_17080449_17080456_+ 0.630673498 0.630959173 0.630816335 0.00020202 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 X + 17080394 17080470 3'utr CG4949 FlyBase G62369.1 GATTGGAATCCGATCTCCGCATCCCAGCCTCATATGTAGTCCAGCATGCCGCTTATGATCTCAAAGGCATCCCGAGC 30 17080449 0.974939437 6 30 186 1 1.51851394 0.696969697 0.1 0.181818182 30 0 0 33 X:17080394-17080470 8 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 TGATCTCA 8mer-A1 dme-bantam-3p X + 17080429 17080460 3'utr CG4949 FlyBase G47081.1 GTAGTCCAGCATGCCGCTTATGATCTCAAAGG 10 17080448 0.689326875 3 9 61 0.9 1.255272505 0.7 0.7 0.85 10 2 0 18 X:17080429-17080460 8 19 4704 FBgn0030813 105.3333333 6.336666667 9.69 0.180379747 2.998421883 1.960784314 0 1 0.5 0.1 dme-miR-304-5p 7mer-m8 TGAGATT X 17135343 17135349 + X_17135343_17135349_+ 0.594409461 0.562640932 0.578525197 0.022463792 CG5004 FBtr0302375|FBtr0346797|FBtr0343201|FBtr0302377|FBtr0074386|FBtr0302376 17135120|17135120|17135120|17135120|17135120|17135120 17135988|17135988|17135988|17135988|17135988|17135988 X + 17135272 17135396 3'utr CG5004 FlyBase G62388.2 AGCTGCTCAACAAGGACACGGGCAAAAGGAACCTAAAACTATCTTTTTTTTTTTGGCGAACTAACGAAATCTGAGATTTCAGAACTGGACCAAAGTCAAGAACGTATTTTTTAGACCTAAAAATT 51 17135342 0.944854379 18 44 247 0.893939394 1.16879202 0.333333333 0.196078431 0.378787879 51 4 3 59 X:17135272-17135396 7 CG5004 FBtr0074386|FBtr0302376|FBtr0343201|FBtr0302377|FBtr0302375|FBtr0346797 17135120|17135120|17135120|17135120|17135120|17135120 17135988|17135988|17135988|17135988|17135988|17135988 TGAGATT 7mer-m8 dme-miR-304-5p X + 17135328 17135392 3'utr CG5004 FlyBase G47092.1 CGAACTAACGAAATCTGAGATTTCAGAACTGGACCAAAGTCAAGAACGTATTTTTTAGACCTAAA 30 17135367 0.821591454 9 24 143 0.780487805 1.028028724 0.146341463 0.333333333 0.512195122 30 7 2 32 X:17135328-17135392 7 17.5 4705 FBgn0260748 2353.313333 97.35 148.4233333 0.007436324 0.179763739 0.11790599 1 -24 -11.5 0.1 dme-miR-980-5p 7mer-A1 AAAAACA X 17135473 17135479 + X_17135473_17135479_+ 0.782850711 0.78291173 0.78288122 4.31E-05 CG5004 FBtr0302375|FBtr0346797|FBtr0343201|FBtr0302377|FBtr0074386|FBtr0302376 17135120|17135120|17135120|17135120|17135120|17135120 17135988|17135988|17135988|17135988|17135988|17135988 X + 17135444 17135528 3'utr CG5004 FlyBase G62390.1 ATGTCTAGATTTAGAAACGATTGTAAGTCAAAAACAGTCCCATGCTACTAACACCGCCATTCTAAAACCTAATCATACAACAGAT 100 17135486 0.722840128 13 86 467 0.901639344 2.041392685 0.049180328 0.13 0.286885246 100 12 0 110 X:17135444-17135528 7 CG5004 FBtr0074386|FBtr0302376|FBtr0343201|FBtr0302377|FBtr0302375|FBtr0346797 17135120|17135120|17135120|17135120|17135120|17135120 17135988|17135988|17135988|17135988|17135988|17135988 AAAAACA 7mer-A1 dme-miR-980-5p X + 17135436 17135602 3'utr CG5004 FlyBase G47093.1 CTATTTTTATGTCTAGATTTAGAAACGATTGTAAGTCAAAAACAGTCCCATGCTACTAACACCGCCATTCTAAAACCTAATCATACAACAGATTTTGAAATTCTTGCTTATTAGGACGGCCTGGTATCAAAGGCAAGCATCTATATGATCGCATATATATCATAAAC 102 17135486 0.770977062 24 86 542 0.882352941 2.130333768 0.091503268 0.382352941 0.588235294 102 18 0 135 X:17135436-17135602 7 55.5 4706 FBgn0260748 2353.313333 97.35 148.4233333 0.02358377 0.570107858 0.373930424 -13 -13 -13 0.1 dme-miR-1006-3p 7mer-A1 GAATTTA X 17135692 17135698 + X_17135692_17135698_+ 0.823260768 0.823070465 0.823165616 0.000134562 CG5004 FBtr0302375|FBtr0346797|FBtr0343201|FBtr0302377|FBtr0074386|FBtr0302376 17135120|17135120|17135120|17135120|17135120|17135120 17135988|17135988|17135988|17135988|17135988|17135988 X + 17135639 17135744 3'utr CG5004 FlyBase G62391.1 ACGATTTAAAAGTAACTACCAAAATGACTCTTGAACACTTGAAGTTTCATCGTGAATTTACCCAATAACGTTATAATATTGTATGCCTATCTATTATATTTTATGA 170 17135696 0.980405892 16 166 1211 0.980487805 2.002166062 0.112195122 0.182352941 0.32195122 170 3 1 201 X:17135639-17135744 7 CG5004 FBtr0074386|FBtr0302376|FBtr0343201|FBtr0302377|FBtr0302375|FBtr0346797 17135120|17135120|17135120|17135120|17135120|17135120 17135988|17135988|17135988|17135988|17135988|17135988 GAATTTA 7mer-A1 dme-miR-1006-3p X + 17135642 17135712 3'utr CG5004 FlyBase G47094.1 ATTTAAAAGTAACTACCAAAATGACTCTTGAACACTTGAAGTTTCATCGTGAATTTACCCAATAACGTTAT 135 17135696 0.749939276 11 135 972 1 2.28780173 0.077319588 0.340740741 0.541237113 135 0 0 194 X:17135642-17135712 7 106.5 4707 FBgn0260748 2353.313333 97.35 148.4233333 0.045255342 1.093990755 0.717542165 -4 -4 -4 0.1 dme-miR-14-3p 6mer3-8 AAGACT X 17135834 17135839 + X_17135834_17135839_+ 0.999524746 0.999787333 0.99965604 0.000185686 CG5004 FBtr0302375|FBtr0346797|FBtr0343201|FBtr0302377|FBtr0074386|FBtr0302376 17135120|17135120|17135120|17135120|17135120|17135120 17135988|17135988|17135988|17135988|17135988|17135988 X + 17135769 17135904 3'utr CG5004 FlyBase G62392.1 ATGTATAATTGGTACAATCCAATCGAGAGATAGGGGGGTCAAATTATTTGCCCATCGCTACGCGTAAGACTAAAACTGAACGATTTGCTCAGGCAGCTGGAAAGGATAATCAAAAGCAAGAGAATAACTGAGAAAC 244 17135833 0.905640922 17 229 1028 0.92936803 1.698970004 0.226765799 0.094262295 0.178438662 244 15 4 250 X:17135769-17135904 6 CG5004 FBtr0074386|FBtr0302376|FBtr0343201|FBtr0302377|FBtr0302375|FBtr0346797 17135120|17135120|17135120|17135120|17135120|17135120 17135988|17135988|17135988|17135988|17135988|17135988 AAGACT 6mer3-8 dme-miR-14-3p X + 17135816 17135915 3'utr CG5004 FlyBase G47095.2 TTGCCCATCGCTACGCGTAAGACTAAAACTGAACGATTTGCTCAGGCAGCTGGAAAGGATAATCAAAAGCAAGAGAATAACTGAGAAACACTAAACTAAT 174 17135833 0.94779885 12 157 666 0.908088235 1.489606966 0.319852941 0.41954023 0.628676471 174 18 7 247 X:17135816-17135915 6 139.5 4708 FBgn0260748 2353.313333 97.35 148.4233333 0.059278124 1.432973806 0.939879174 1 1 1 0.1 dme-miR-317-5p 6mer2-7 TATCCC X 17150398 17150403 + X_17150398_17150403_+ 1 0.999999999 1 0 CG5010 FBtr0343291|FBtr0074387 17150298|17150298 17150647|17150647 X + 17150277 17150526 stop_codon CG5010 FlyBase G62399.1 AGCAGAGCCACCATCTCCAGTAGAGGGCCCAGCTCCGGTAGAATATCATCTGGCCAAGCACCGGCGGATGAACGCAGCCGGATGAACCCATCGGATGAACACCTCCGGATGAACTCTGTCCTATCCCTTCGTTTAGTTCTTAATTGTTTAATTGCAAGCATCTGAAAGAAAGCATTGTTTAATTGTAGTGCAAAATGAAATGTTAAATAGAAAATCCCGTTGGCAGCCCAAAACCCTTTCCAAAAAAAAA 111 17150398 0.999986539 32 107 651 0.965034965 2.139879086 0.251748252 0.198198198 0.377622378 111 5 0 138 X:17150277-17150526 6 CG5010 FBtr0343291|FBtr0074387 17150298|17150298 17150647|17150647 TATCCC 6mer2-7 dme-miR-317-5p X + 17150352 17150423 3'utr CG5010 FlyBase G47099.1 AGCCGGATGAACCCATCGGATGAACACCTCCGGATGAACTCTGTCCTATCCCTTCGTTTAGTTCTTAATTGT 34 17150398 0.982637935 11 31 228 0.928571429 1.716003344 0.035714286 0.382352941 0.625 34 4 0 52 X:17150352-17150423 6 32.5 4709 FBgn0260747 667.7266667 81.68 125.22 0.048672611 0.397894221 0.259543204 0 0 0 0.1 dme-bantam-3p 6mer2-7 GATCTC X 17241495 17241500 - X_17241495_17241500_- 0.609797005 0.983909447 0.796853226 0.264537415 CG8915 FBtr0339780|FBtr0074447 17240466|17241265 17241817|17241817 X - 17241434 17241521 3'utr CG8915 FlyBase G68396.1 ACTTATTCGAATATTTAACGAGATCTCTGCGCATTATTCCCTGAAATGTGTCGGGCAAGAACTTATGGTCCCTGCTTTGATTTCCATT 29 17241494 0.976213055 6 29 187 1 1.612783857 0.048780488 0.310344828 0.512195122 29 0 0 41 X:17241434-17241521 6 CG8915 FBtr0339780|FBtr0074447 17240466|17241265 17241817|17241817 GATCTC 6mer2-7 dme-bantam-3p X - 17241458 17241517 3'utr CG8915 FlyBase G51461.1 ATTCGAATATTTAACGAGATCTCTGCGCATTATTCCCTGAAATGTGTCGGGCAAGAACTT 13 17241494 0.978374742 5 13 93 1 1.342422681 0.136363636 0.461538462 0.681818182 13 0 0 22 X:17241458-17241517 6 19 4710 FBgn0030833 168.33 5.216666667 8 0.112873522 3.642172524 2.375 -6 -6 -6 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 17241577 17241583 - X_17241577_17241583_- 0.77180138 0.766218299 0.76900984 0.003947848 CG8915 FBtr0339780|FBtr0339780|FBtr0339780|FBtr0074447|FBtr0074447|FBtr0074447 17240466|17240466|17240466|17241265|17241265|17241265 17241817|17241817|17241817|17241817|17241817|17241817 X - 17241563 17241657 3'utr CG8915 FlyBase G68397.1 TCCACTGCACTTCTTACATATTAAGGTATATCTAAGGTAGCACACACGATATCTTAACTATATTCCTTACATGTTGTGATACAAGAAGGCGCAAA 84 17241584 0.95910057 9 77 554 0.907407407 1.146128036 0.018518519 0.238095238 0.407407407 84 4 6 98 X:17241563-17241657 7 CG8915 FBtr0339780|FBtr0339780|FBtr0339780|FBtr0074447|FBtr0074447|FBtr0074447 17240466|17240466|17240466|17241265|17241265|17241265 17241817|17241817|17241817|17241817|17241817|17241817 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 17241565 17241623 3'utr CG8915 FlyBase G51462.1 AGGTAGCACACACGATATCTTAACTATATTCCTTACATGTTGTGATACAAGAAGGCGCA 54 17241585 0.981921612 9 48 364 0.87654321 0.897015839 0 0.388888889 0.592592593 54 2 8 71 X:17241565-17241623 7 64 4711 FBgn0030833 168.33 5.216666667 8 0.380205549 12.26837061 8 1 2 1.5 0.1 dme-miR-79-3p 7mer-A1 AGCTTTA X 17305161 17305167 + X_17305161_17305167_+ 0.823349281 0.82334955 0.823349415 1.41E-07 CG5445 FBtr0074427|FBtr0074428|FBtr0339777|FBtr0339778|FBtr0074425 17304836|17304836|17304836|17304836|17304836 17305475|17305475|17305475|17305475|17305475 X + 17305144 17305198 3'utr CG5445 FlyBase G62414.1 TCGGTGTCAGACAGATCAGCTTTATATATATATATCGATATGTCGCGAAGGGAGC 23 17305159 0.97624235 6 18 164 0.848484848 1.447158031 0.121212121 0.347826087 0.545454545 23 5 0 28 X:17305144-17305198 7 CG5445 FBtr0339778|FBtr0074425|FBtr0074428|FBtr0339777|FBtr0074427 17304836|17304836|17304836|17304836|17304836 17305475|17305475|17305475|17305475|17305475 AGCTTTA 7mer-A1 dme-miR-79-3p X + 17305131 17305189 3'utr CG5445 FlyBase G47110.1 CCACTCCTTAATTTCGGTGTCAGACAGATCAGCTTTATATATATATATCGATATGTCGC 10 17305159 0.985392029 4 10 83 1 1.113943352 0.153846154 0.3 0.461538462 10 0 0 13 X:17305131-17305189 7 14.5 4712 FBgn0030838 342.0933333 22.24 33.86 0.042386093 0.651978417 0.428233904 2 2 2 0.1 dme-miR-980-5p 6mer3-8 GAAAAA X 17305445 17305450 + X_17305445_17305450_+ 0.621884841 0.928528003 0.775206422 0.216829486 CG5445 FBtr0074427|FBtr0074428|FBtr0339777|FBtr0339778|FBtr0074425 17304836|17304836|17304836|17304836|17304836 17305475|17305475|17305475|17305475|17305475 X + 17305431 17305477 3'utr CG5445 FlyBase G62416.1 AAGTGTTTTATTGAGAAAAAATAAGAATGAAGCAGAAGGATTAAGAA 108 17305452 0.961475201 4 99 355 0.939655172 1.736396502 0.301724138 0.074074074 0.137931034 108 6 1 109 X:17305431-17305477 6 CG5445 FBtr0339778|FBtr0074425|FBtr0074428|FBtr0339777|FBtr0074427 17304836|17304836|17304836|17304836|17304836 17305475|17305475|17305475|17305475|17305475 GAAAAA 6mer3-8 dme-miR-980-5p X + 17305400 17305478 3'utr CG5445 FlyBase G47112.1 AAGCTAAGAAACGTGTAACAAAATTAGATCTAAGTGTTTTATTGAGAAAAAATAAGAATGAAGCAGAAGGATTAAGAAA 67 17305452 0.933633773 7 63 216 0.950980392 1.986771734 0.323529412 0.358208955 0.578431373 67 5 0 97 X:17305400-17305478 6 82.5 4713 FBgn0030838 342.0933333 22.24 33.86 0.241162256 3.709532374 2.436503249 -7 -7 -7 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT X 17456851 17456857 - X_17456851_17456857_- 0.658986801 0.658716679 0.65885174 0.00019099 CG43658 FBtr0310336|FBtr0310337|FBtr0342803|FBtr0342802|FBtr0310338|FBtr0310339|FBtr0310335|FBtr0330597 17456555|17456555|17456555|17456555|17456555|17456167|17456555|17456555 17458220|17458220|17458220|17457905|17458220|17458220|17458220|17457905 X - 17456836 17456916 3'utr CG43658 FlyBase G68422.1 CGACCATGTGCAGCACTTCTTATCGGTTTTTCTCAAGCTTTTCGAAGCGAAAACTCTGAGGCAGCTGGCAGCACTTTCCTT 16 17456861 0.942799889 6 15 67 0.944444444 1.230448921 0.166666667 0.125 0.222222222 16 1 0 17 X:17456836-17456916 7 CG43658 FBtr0342802|FBtr0342803|FBtr0310337|FBtr0310336|FBtr0330597|FBtr0310335|FBtr0310339|FBtr0310338 17456555|17456555|17456555|17456555|17456555|17456555|17456167|17456555 17457905|17458220|17458220|17458220|17457905|17458220|17458220|17458220 GGCAGCT 7mer-m8 dme-miR-980-3p X - 17456841 17456873 3'utr CG43658 FlyBase G51474.1 GAAGCGAAAACTCTGAGGCAGCTGGCAGCACTT 6 17456861 0.793668973 2 6 14 1 0.903089987 0.5 0.166666667 0.375 6 0 0 8 X:17456841-17456873 7 10 4714 FBgn0263706 341.6233333 5.406666667 8.273333333 0.029272005 1.849568434 1.208702659 4 4 4 0.1 dme-miR-33-5p 7mer-A1 AATGCAA X 17456938 17456944 - X_17456938_17456944_- 0.66573056 0.78116681 0.723448685 0.08162572 CG43658 FBtr0310336|FBtr0310337|FBtr0342803|FBtr0342802|FBtr0310338|FBtr0310339|FBtr0310335|FBtr0330597 17456555|17456555|17456555|17456555|17456555|17456167|17456555|17456555 17458220|17458220|17458220|17457905|17458220|17458220|17458220|17457905 X - 17456934 17456998 3'utr CG43658 FlyBase G68423.1 GTTATCCGGGAAACTGTCGAAGGAGCAGGACTTGTGGATGGAGTGCGACATGGTAATGCAAATGG 9 17456963 0.969799589 6 8 45 0.8 0.903089987 0.5 0.111111111 0.2 9 2 0 8 X:17456934-17456998 7 CG43658 FBtr0342802|FBtr0342803|FBtr0310337|FBtr0310336|FBtr0330597|FBtr0310335|FBtr0310339|FBtr0310338 17456555|17456555|17456555|17456555|17456555|17456555|17456167|17456555 17457905|17458220|17458220|17458220|17457905|17458220|17458220|17458220 AATGCAA 7mer-A1 dme-miR-33-5p X - 17456920 17457005 3'utr CG43658 FlyBase G51475.1 TTGTTTAGTTATCCGGGAAACTGTCGAAGGAGCAGGACTTGTGGATGGAGTGCGACATGGTAATGCAAATGGTTATTTGGCCCATT 12 17456960 0.978494555 6 10 77 0.875 1.146128036 0.1875 0.25 0.4375 12 2 0 14 X:17456920-17457005 7 4.5 4715 FBgn0263706 341.6233333 5.406666667 8.273333333 0.013172402 0.832305795 0.543916197 19 16 17.5 0.1 dme-miR-970-3p 6mer2-7 CTTATG X 17605918 17605923 + X_17605918_17605923_+ 0.997837475 0.997041305 0.99743939 0.000562998 X11L FBtr0340620|FBtr0340621|FBtr0333757|FBtr0301696|FBtr0074451 17605308|17605308|17605308|17605308|17605308 17606100|17606879|17606100|17606879|17606100 X + 17605898 17605951 3'utr X11L FlyBase G62436.1 AGAAACAAAAAGCAACACACCTTATGCCAAAAAAGATTAGATTTCGTTAAACTT 60 17605922 0.946270296 5 58 245 0.971428571 1.832508913 0.057142857 0.166666667 0.285714286 60 2 0 68 X:17605898-17605951 6 X11L FBtr0340621|FBtr0333757|FBtr0301696|FBtr0074451|FBtr0340620 17605308|17605308|17605308|17605308|17605308 17606879|17606100|17606879|17606100|17606100 CTTATG 6mer2-7 dme-miR-970-3p X + 17605903 17606025 3'utr X11L FlyBase G47123.1 CAAAAAGCAACACACCTTATGCCAAAAAAGATTAGATTTCGTTAAACTTATTATTGTATAGAGCCATTGCGGATAATTATTGCAATACCATTACCGATATTTATTATTAAAAATAGCCTTAGA 44 17605922 0.963866018 9 42 224 0.948275862 1.740362689 0.189655172 0.272727273 0.448275862 44 3 0 55 X:17605903-17606025 6 42 4716 FBgn0026313 772.0566667 18.08 27.68333333 0.054400152 2.32300885 1.517158338 -4 -4 -4 0.1 dme-miR-8-3p 7mer-m8 CAGTATT X 17623353 17623359 - X_17623353_17623359_- 0.661602598 0.661606062 0.66160433 2.47E-06 stas FBtr0074487 17623219 17623694 X - 17623328 17623423 3'utr stas FlyBase G68462.1 ACTTTTGCATCATATATTTCCATCAATCGTTTTTAAGTTAGTGAATTTTTGTTTAGTGCTATTGCAGTATTTACTAGAAAAGTTCTCCTCTAAGTA 112 17623362 0.83031074 8 111 1260 0.9921875 2.103803721 0.234375 0.142857143 0.25 112 1 0 127 X:17623328-17623423 7 stas FBtr0074487 17623219 17623694 CAGTATT 7mer-m8 dme-miR-8-3p X - 17623333 17623538 3'utr stas FlyBase G51501.1 TTTTCGGAATGCCACTTTGGGTCTCGATCCACTATGTTTAAGACAACTACAAAATATCTGTGTTTATCCTATTATTAAAATTATTAATGTTTTCTGAACTTGTTCTTACCAAACAACTTTTGCATCATATATTTCCATCAATCGTTTTTAAGTTAGTGAATTTTTGTTTAGTGCTATTGCAGTATTTACTAGAAAAGTTCTCCTCT 110 17623362 0.990887901 21 104 1104 0.957055215 2.193124598 0.214723926 0.327272727 0.54601227 110 7 0 156 X:17623333-17623538 7 81.5 4717 FBgn0030850 1912.336667 122.8733333 188.6933333 0.042618019 0.663284683 0.43191775 3 3 3 0.1 dme-miR-305-3p 6mer3-8 ATGTGC X 17640474 17640479 - X_17640474_17640479_- 0.999984894 0.999981288 0.999983091 2.55E-06 RhoGAPp190 FBtr0333661|FBtr0333659|FBtr0333662|FBtr0333660|FBtr0074482|FBtr0074483 17639145|17639145|17639145|17639145|17639145|17639145 17641617|17641617|17641617|17641617|17641617|17641617 X - 17640449 17640503 3'utr RhoGAPp190 FlyBase G68487.1 AATCTAATTTTCGAGCTAAACTAAATGTGCATCTCAGTGTGTGTGTCTGTCTGTA 61 17640477 0.870920746 7 57 547 0.944444444 1.531478917 0.277777778 0.163934426 0.291666667 61 3 1 68 X:17640449-17640503 6 RhoGAPp190 FBtr0333660|FBtr0333662|FBtr0074483|FBtr0074482|FBtr0333659|FBtr0333661 17639145|17639145|17639145|17639145|17639145|17639145 17641617|17641617|17641617|17641617|17641617|17641617 ATGTGC 6mer3-8 dme-miR-305-3p X - 17640449 17640493 3'utr RhoGAPp190 FlyBase G51518.1 TCGAGCTAAACTAAATGTGCATCTCAGTGTGTGTGTCTGTCTGTA 21 17640476 0.833026673 3 20 193 0.970588235 1.51851394 0.294117647 0.476190476 0.676470588 21 1 0 33 X:17640449-17640493 6 38 4718 FBgn0026375 866.7733333 14.19333333 21.75666667 0.043840758 2.677313293 1.746591083 -2 -3 -2.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT X 17640635 17640640 - X_17640635_17640640_- 1 0.999996529 0.999998265 2.47E-06 RhoGAPp190 FBtr0074481|FBtr0333661|FBtr0333659|FBtr0333662|FBtr0333660|FBtr0074482|FBtr0074483 17640504|17639145|17639145|17639145|17639145|17639145|17639145 17641617|17641617|17641617|17641617|17641617|17641617|17641617 X - 17640573 17640664 3'utr RhoGAPp190 FlyBase G68488.1 TAAATACCACTAAATGTCTGTGTGTCTAGTATAGGAGAAAGTAGGAGAGGTGGAGCCGTAGGAGCAGGGGGAGGGGGAGAGAAAGGATGAGC 18 17640641 0.984977476 9 17 128 0.95 1.278753601 0.25 0.111111111 0.2 18 1 0 19 X:17640573-17640664 6 RhoGAPp190 FBtr0333660|FBtr0333662|FBtr0074483|FBtr0074482|FBtr0074481|FBtr0333659|FBtr0333661 17639145|17639145|17639145|17639145|17640504|17639145|17639145 17641617|17641617|17641617|17641617|17641617|17641617|17641617 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" X - 17640566 17640665 3'utr RhoGAPp190 FlyBase G51519.1 TTAAATACCACTAAATGTCTGTGTGTCTAGTATAGGAGAAAGTAGGAGAGGTGGAGCCGTAGGAGCAGGGGGAGGGGGAGAGAAAGGATGAGCGAAGCGA 8 17640640 0.9804256 5 8 53 1 1.176091259 0.4 0.625 0.8 8 0 0 15 X:17640566-17640665 6 10.5 4719 FBgn0026375 866.7733333 14.19333333 21.75666667 0.012113894 0.739783936 0.482610694 1 0 0.5 0.1 dme-miR-1002-5p 6mer3-8 CTACTT X 17641575 17641580 - X_17641575_17641580_- 0.849638417 0.930939384 0.890288901 0.057488488 RhoGAPp190 FBtr0074481|FBtr0333661|FBtr0333659|FBtr0333662|FBtr0333660|FBtr0074482|FBtr0074483 17640504|17639145|17639145|17639145|17639145|17639145|17639145 17641617|17641617|17641617|17641617|17641617|17641617|17641617 X - 17641563 17641693 stop_codon RhoGAPp190 FlyBase G68494.1 GGAGGACATTGTCCAGACAATGATTGACCAGTTCCCGTATCTGTTCTGCGGCAAGGATGCTTTTGTCATGGTCTAGGCCTAGATCCCCGCCAGGCCATGGCACACTTGGACTTCTACTTGACCGCCGGACG 22 17641587 0.979272593 8 19 122 0.88 1.342422681 0.16 0.136363636 0.24 22 3 0 22 X:17641563-17641693 6 RhoGAPp190 FBtr0333660|FBtr0333662|FBtr0074483|FBtr0074482|FBtr0074481|FBtr0333659|FBtr0333661 17639145|17639145|17639145|17639145|17640504|17639145|17639145 17641617|17641617|17641617|17641617|17641617|17641617|17641617 CTACTT 6mer3-8 dme-miR-1002-5p X - 17641554 17641602 3'utr RhoGAPp190 FlyBase G51524.1 AGGCCATGGCACACTTGGACTTCTACTTGACCGCCGGACGCGAAGCCAA 8 17641587 0.963624051 2 8 41 1 1.079181246 0.166666667 0.5 0.666666667 8 0 0 12 X:17641554-17641602 6 11 4720 FBgn0026375 866.7733333 14.19333333 21.75666667 0.012690746 0.775011743 0.505592156 7 7 7 0.1 dme-miR-318-3p 7mer-A1 CCAGTGA X 17668624 17668630 + X_17668624_17668630_+ 0.823044788 0.821702731 0.82237376 0.000949008 beta-Spec FBtr0334405 17667960 17669371 X + 17668568 17668660 3'utr beta-Spec FlyBase G62494.1 ATTGACCTTCCGCGGTGAGCCCAGCTACGATCTGCAAAACGCTGCCATCGAAATTGCCAGTGATTACACCAAGAAGAAGCACGTTCTGCGAGT 24 17668632 0.896149945 6 23 95 0.965517241 1.447158031 0.24137931 0.166666667 0.310344828 24 1 0 28 X:17668568-17668660 7 beta-Spec FBtr0334405 17667960 17669371 CCAGTGA 7mer-A1 dme-miR-318-3p X + 17668613 17668648 3'utr beta-Spec FlyBase G47158.1 CATCGAAATTGCCAGTGATTACACCAAGAAGAAGCA 9 17668632 0.954673847 2 8 36 0.928571429 1.113943352 0.285714286 0.444444444 0.642857143 9 1 0 13 X:17668613-17668648 7 13 4721 FBgn0250788 4584.71 71.70666667 109.7433333 0.002835512 0.181294161 0.118458221 -8 -8 -8 0.1 dme-miR-986-5p 6mer3-8 ATTCGA X 17668837 17668842 + X_17668837_17668842_+ 0.999391469 0.999477538 0.999434504 6.08E-05 beta-Spec FBtr0334405 17667960 17669371 X + 17668801 17668858 3'utr beta-Spec FlyBase G62495.1 TGTCCCAGTGGGTGACCTCCCTGAAAGCCCAGAGCGATTCGACAGCGGTGGCCGCCAG 13 17668838 0.850856066 4 12 29 0.866666667 1.113943352 0.6 0.153846154 0.266666667 13 2 0 13 X:17668801-17668858 6 beta-Spec FBtr0334405 17667960 17669371 ATTCGA 6mer3-8 dme-miR-986-5p X + 17668806 17668863 3'utr beta-Spec FlyBase G47159.1 CAGTGGGTGACCTCCCTGAAAGCCCAGAGCGATTCGACAGCGGTGGCCGCCAGCAGAT 11 17668838 0.889042501 5 9 28 0.944444444 1.230448921 0.111111111 0.454545455 0.666666667 11 1 0 17 X:17668806-17668863 6 9.5 4722 FBgn0250788 4584.71 71.70666667 109.7433333 0.002072105 0.132484195 0.086565623 -1 -1 -1 0.1 dme-miR-980-3p 7mer-A1 GCAGCTA X 17668969 17668975 + X_17668969_17668975_+ 0.823349546 0.823349321 0.823349434 1.41E-07 beta-Spec FBtr0334404|FBtr0074454|FBtr0334405 17668936|17668936|17667960 17669371|17669371|17669371 X + 17668943 17669050 3'utr beta-Spec FlyBase G62496.1 CAGCCGTAACGCAACCATAAGCAAGAGCAGCTAATTAAAACAAATAACAAATAACATGAAATGATATAATACAAATGCAAAACGACAACAAATTATACAGCAAAAATT 36 17668977 0.943899992 8 29 116 0.842105263 1.505149978 0 0.055555556 0.105263158 36 6 0 32 X:17668943-17669050 7 beta-Spec FBtr0334405|FBtr0074454|FBtr0334404 17667960|17668936|17668936 17669371|17669371|17669371 GCAGCTA 7mer-A1 dme-miR-980-3p X + 17668943 17668980 3'utr beta-Spec FlyBase G47160.1 CAGCCGTAACGCAACCATAAGCAAGAGCAGCTAATTAA 8 17668960 0.949219321 3 6 24 0.727272727 0.903089987 0 0.375 0.545454545 8 3 0 8 X:17668943-17668980 7 16 4723 FBgn0250788 4584.71 71.70666667 109.7433333 0.003489861 0.223131276 0.145794733 -8 9 0.5 0.1 dme-bantam-3p 6mer3-8 TGATCT X 17700803 17700808 - X_17700803_17700808_- 0.948482916 0.804463845 0.87647338 0.101836882 CG8188 FBtr0074476|FBtr0100463|FBtr0340633|FBtr0346186 17699770|17700093|17699770|17698915 17701015|17701015|17701015|17701015 X - 17700778 17700839 3'utr CG8188 FlyBase G68523.1 AAAGGAGGAGGCGCGCTATGAAATTTTACACTGATCTGATAAAAAACAAAACAGACAAAAAA 46 17700814 0.985770151 6 43 358 0.914893617 1.633468456 0.489361702 0.02173913 0.042553191 46 4 0 43 X:17700778-17700839 6 CG8188 FBtr0340633|FBtr0346186|FBtr0074476|FBtr0100463 17699770|17698915|17699770|17700093 17701015|17701015|17701015|17701015 TGATCT 6mer3-8 dme-bantam-3p X - 17700792 17700840 3'utr CG8188 FlyBase G51542.1 CAAAGGAGGAGGCGCGCTATGAAATTTTACACTGATCTGATAAAAAACA 25 17700815 0.985151197 4 24 196 0.970588235 1.51851394 0.323529412 0.32 0.5 25 1 0 33 X:17700792-17700840 6 32.5 4724 FBgn0030863 1351.526667 71.57333333 110.0366667 0.02404688 0.454079732 0.295356093 6 7 6.5 0.1 dme-miR-276a-3p 6mer3-8 AGTTCC X 17700996 17701001 - X_17700996_17701001_- 0.999999987 0.607769884 0.803884935 0.277348563 CG8188 FBtr0074476|FBtr0100463|FBtr0340633|FBtr0346186 17699770|17700093|17699770|17698915 17701015|17701015|17701015|17701015 X - 17700969 17701038 stop_codon CG8188 FlyBase G68524.1 AACGCATGCTGAAGAGATTATGAGAGGCATAAGGCGGAGTTCCATGGACTAGCTAATCAACCAGGAGCAG 63 17700994 0.904127642 8 59 292 0.945205479 1.361727836 0.178082192 0.142857143 0.260273973 63 2 2 69 X:17700969-17701038 6 CG8188 FBtr0340633|FBtr0346186|FBtr0074476|FBtr0100463 17699770|17698915|17699770|17700093 17701015|17701015|17701015|17701015 AGTTCC 6mer3-8 dme-miR-276a-3p X - 17700962 17701044 stop_codon CG8188 FlyBase G51543.1 AGAAGAAACGCATGCTGAAGAGATTATGAGAGGCATAAGGCGGAGTTCCATGGACTAGCTAATCAACCAGGAGCAGTAAGTAG 33 17700994 0.94700875 7 32 132 1 1.662757832 0.282608696 0.333333333 0.52173913 33 0 0 46 X:17700962-17701044 6 44 4725 FBgn0030863 1351.526667 71.57333333 110.0366667 0.032555776 0.614754098 0.399866711 -7 -7 -7 0.1 dme-miR-2b-2-5p 6mer3-8 TTGAAG X 17706631 17706636 + X_17706631_17706636_+ 0.888393765 0.704160181 0.796276973 0.130272828 par-6 FBtr0074455 17705418 17707096 X + 17706606 17706652 3'utr par-6 FlyBase G62513.1 ACGTACCCCTGTACACACAATTGAATTGAAGTCTGTGTATTCGCTTT 21 17706631 0.776636868 4 21 180 1 1.380211242 0 0.095238095 0.208333333 21 0 0 24 X:17706606-17706652 6 par-6 FBtr0074455 17705418 17707096 TTGAAG 6mer3-8 dme-miR-2b-2-5p X + 17706615 17706652 3'utr par-6 FlyBase G47175.1 TGTACACACAATTGAATTGAAGTCTGTGTATTCGCTTT 12 17706631 0.870498979 5 11 106 0.941176471 1.204119983 0 0.166666667 0.411764706 12 1 0 16 X:17706615-17706652 6 16.5 4726 FBgn0026192 952.7333333 39.83333333 61.04 0.017318592 0.414225941 0.270314548 0 0 0 0.1 dme-miR-33-5p 7mer-m1 AATGCAC X 17707476 17707482 - X_17707476_17707482_- 0.829692067 0.829678343 0.829685205 9.76E-06 CG8173 FBtr0074475 17707399 17707634 X - 17707459 17707516 3'utr CG8173 FlyBase G68531.1 AACAAACCAATTACGGTTAAAGCCCCAAAACGCGAATGCACACTTAAGCAAATTGTAC 9 17707479 0.912550339 4 8 26 1 1 0.1 0.111111111 0.2 9 0 0 10 X:17707459-17707516 7 CG8173 FBtr0074475 17707399 17707634 AATGCAC 7mer-m1 dme-miR-33-5p X - 17707458 17707498 3'utr CG8173 FlyBase G51550.1 AAAGCCCCAAAACGCGAATGCACACTTAAGCAAATTGTACA 7 17707480 0.908424206 2 7 17 1 1.146128036 0.071428571 0.571428571 0.785714286 7 0 0 14 X:17707458-17707498 7 6.5 4727 FBgn0030864 922.93 68.84666667 105.6433333 0.007042788 0.094412705 0.061527782 -3 -2 -2.5 0.1 dme-miR-252-5p 8mer-m1 GTACTTAG X 17821339 17821346 - X_17821339_17821346_- 0.63678884 0.636788675 0.636788758 7.07E-08 Socs16D FBtr0310310|FBtr0074473 17820762|17820773 17822326|17822326 X - 17821279 17821382 3'utr Socs16D FlyBase G68544.1 AAAGCGAGCGAATTATGATATAACCATTAACGCATTGTACTTAGTTTAATCCATGTCATGTACACAAATGATCGATTGCCAGATGGAAAGAATGGCGAACACAC 43 17821347 0.982730105 8 42 317 0.982142857 1.740362689 0.053571429 0.279069767 0.446428571 43 1 0 55 X:17821279-17821382 8 Socs16D FBtr0074473|FBtr0310310 17820773|17820762 17822326|17822326 GTACTTAG 8mer-m1 dme-miR-252-5p X - 17821282 17821408 3'utr Socs16D FlyBase G51559.1 GCAACGCCCGTGCCCAAAGGTCCTTGAAAGCGAGCGAATTATGATATAACCATTAACGCATTGTACTTAGTTTAATCCATGTCATGTACACAAATGATCGATTGCCAGATGGAAAGAATGGCGAACA 33 17821347 0.975830784 10 33 208 1 1.73239376 0.092592593 0.454545455 0.666666667 33 0 0 54 X:17821282-17821408 8 17.5 4728 FBgn0030869 790.3733333 19.79 30.42 0.022141435 0.884284992 0.575279421 1 1 1 0.1 dme-miR-1008-3p 8mer-A1 AGCTGTGA X 17821556 17821563 - X_17821556_17821563_- 0.640294288 0.639371746 0.639833017 0.000652377 Socs16D FBtr0310310|FBtr0074473 17820762|17820773 17822326|17822326 X - 17821513 17821582 3'utr Socs16D FlyBase G68545.1 ACTTTTATGCTTGCCTTTTAGCTGTGATTTAAATAAGTCGTCGAATGTTAATTGGAAGACGATGTGCAGT 61 17821565 0.992139498 12 56 632 0.931506849 1.531478917 0.178082192 0.163934426 0.301369863 61 4 1 68 X:17821513-17821582 8 Socs16D FBtr0074473|FBtr0310310 17820773|17820762 17822326|17822326 AGCTGTGA 8mer-A1 dme-miR-1008-3p X - 17821535 17821576 3'utr Socs16D FlyBase G51560.1 ATGCTTGCCTTTTAGCTGTGATTTAAATAAGTCGTCGAATGT 52 17821554 0.62935682 11 48 531 0.933333333 1.62324929 0.244444444 0.538461538 0.733333333 52 5 1 84 X:17821535-17821576 8 54 4729 FBgn0030869 790.3733333 19.79 30.42 0.068322143 2.728650834 1.775147929 2 -9 -3.5 0.1 "dme-miR-995-3p,dme-miR-998-3p" 7mer-A1 GGTGCTA X 17821924 17821930 - X_17821924_17821930_- 0.823349562 0.823349562 0.823349562 0 Socs16D FBtr0310310|FBtr0074473 17820762|17820773 17822326|17822326 X - 17821913 17821940 3'utr Socs16D FlyBase G68548.1 TTTTGTACTCGGTGCTATACTATAAATA 9 17821934 0.71350446 5 8 80 0.888888889 0.903089987 0 0 0 9 1 0 8 X:17821913-17821940 7 Socs16D FBtr0074473|FBtr0310310 17820773|17820762 17822326|17822326 GGTGCTA 7mer-A1 "dme-miR-995-3p,dme-miR-998-3p" X - 17821911 17821940 3'utr Socs16D FlyBase G51561.1 TTTTGTACTCGGTGCTATACTATAAATATT 9 17821936 0.627289222 6 8 83 0.857142857 1.079181246 0.071428571 0.444444444 0.642857143 9 2 0 12 X:17821911-17821940 7 9 4730 FBgn0030869 790.3733333 19.79 30.42 0.011387024 0.454775139 0.295857988 4 6 5 0.1 dme-miR-92b-3p 7mer-m1 TGCAATT X 17848285 17848291 - X_17848285_17848291_- 0.398470864 0.448107825 0.423289344 0.035098589 CG15814 FBtr0074468|FBtr0074470|FBtr0074469|FBtr0074471 17848108|17848108|17848108|17848108 17848640|17848640|17848640|17848640 X - 17848259 17848317 3'utr CG15814 FlyBase G68559.1 ATTGGAGTCTTTAATCGAAACGTAAATGCAATTTTGGATATATGTATCTATATCTATAT 25 17848295 0.982125177 5 24 208 0.965517241 1.447158031 0.103448276 0.12 0.24137931 25 1 0 28 X:17848259-17848317 7 CG15814 FBtr0074471|FBtr0074469|FBtr0074470|FBtr0074468 17848108|17848108|17848108|17848108 17848640|17848640|17848640|17848640 TGCAATT 7mer-m1 dme-miR-92b-3p X - 17848271 17848318 3'utr CG15814 FlyBase G51572.1 CATTGGAGTCTTTAATCGAAACGTAAATGCAATTTTGGATATATGTAT 13 17848295 0.929928999 5 12 100 0.9375 1.176091259 0.0625 0.230769231 0.375 13 1 0 15 X:17848271-17848318 7 18 4731 FBgn0030873 590.5033333 43.31 66.22 0.03048247 0.415608405 0.271821202 4 4 4 0.1 dme-bantam-3p 6mer2-7 GATCTC X 17851829 17851834 + X_17851829_17851834_+ 0.997370158 0.99731585 0.997343004 3.85E-05 CG6506 FBtr0074465 17851740 17851889 X + 17851809 17851856 3'utr CG6506 FlyBase G62553.1 ACTTTTTATAGAACGACTAAGATCTCTAGGCTCAAGTTAAGTTAAGCT 86 17851835 0.761354949 5 85 401 0.990566038 2.021189299 0.132075472 0.197674419 0.349056604 86 1 0 105 X:17851809-17851856 6 CG6506 FBtr0074465 17851740 17851889 GATCTC 6mer2-7 dme-bantam-3p X + 17851787 17851844 3'utr CG6506 FlyBase G47198.1 CTCTAGCAATCAAATGTTTCACACTTTTTATAGAACGACTAAGATCTCTAGGCTCAAG 43 17851835 0.956567528 3 42 199 0.983870968 1.785329835 0.096774194 0.348837209 0.548387097 43 1 0 61 X:17851787-17851844 6 63 4732 FBgn0030874 43.33333333 3.953333333 5.973333333 1.453846154 15.93591906 10.546875 -6 -6 -6 0.1 dme-miR-305-5p 7mer-m1 GTACAAT X 17858578 17858584 - X_17858578_17858584_- 0.765586663 0.765586663 0.765586663 0 Arp8 FBtr0074544 17858377 17858769 X - 17858540 17858602 3'utr Arp8 FlyBase G68565.1 ACAAATTTATACAAGATTGTACAATTATTTTATTTTTAAAGACACCTAACAAATATGCAGAAT 7 17858579 0.99459099 6 6 63 0.777777778 0.84509804 0.111111111 0.285714286 0.444444444 7 2 0 7 X:17858540-17858602 7 Arp8 FBtr0074544 17858377 17858769 GTACAAT 7mer-m1 dme-miR-305-5p X - 17858573 17858643 3'utr Arp8 FlyBase G51575.1 AGCATTACCCTGGAGGAAGGAAACACTCCGGATGGGGTCATACAAATTTATACAAGATTGTACAATTATTT 11 17858584 0.87856763 7 11 55 1 1.146128036 0 0.181818182 0.357142857 11 0 0 14 X:17858573-17858643 7 4.5 4733 FBgn0030877 203.0033333 10.82333333 16.55 0.022167124 0.415768402 0.271903323 -5 0 -2.5 0.1 dme-miR-79-3p 7mer-A1 AGCTTTA X 17906060 17906066 - X_17906060_17906066_- 0.823203452 0.823349562 0.823276507 0.000103308 CG7772 FBtr0074540 17906029 17906174 X - 17906051 17906133 3'utr CG7772 FlyBase G68594.1 AGTCTACTCCCATTCTACTCCACGGTGATAGTTCTTAGATACTAAGAGTTTACATGAACTGTAGCAAAGCTTTAGCCCCAAAT 12 17906074 0.87536539 8 10 77 0.916666667 1.041392685 0.333333333 0 0 12 1 0 11 X:17906051-17906133 7 CG7772 FBtr0074540 17906029 17906174 AGCTTTA 7mer-A1 dme-miR-79-3p X - 17906053 17906118 3'utr CG7772 FlyBase G51592.1 TACTCCACGGTGATAGTTCTTAGATACTAAGAGTTTACATGAACTGTAGCAAAGCTTTAGCCCCAA 11 17906075 0.920476507 7 9 63 0.8 1.204119983 0.15 0.363636364 0.65 11 4 0 16 X:17906053-17906118 7 3.5 4734 FBgn0030883 188.33 28.34666667 43.33666667 0.0185844 0.123471308 0.080763018 8 9 8.5 0.1 dme-bantam-3p 7mer-A1 GATCTCA X 17924507 17924513 - X_17924507_17924513_- 0.823348787 0.823348089 0.823348438 4.95E-07 Sh FBtr0089658 17924305 17930123 X - 17924496 17924534 3'utr Sh FlyBase G68596.1 AAATTGAAACCAACCAAATTGGATCTCAAATCAAAGCAG 54 17924515 0.777553198 3 50 223 0.9375 1.477121255 0.046875 0.148148148 0.28125 54 3 1 60 X:17924496-17924534 7 Sh FBtr0089658 17924305 17930123 GATCTCA 7mer-A1 dme-bantam-3p X - 17924495 17924530 3'utr Sh FlyBase G51593.1 TGAAACCAACCAAATTGGATCTCAAATCAAAGCAGC 34 17924515 0.934119463 2 31 135 0.921568627 1.371067862 0.039215686 0.411764706 0.607843137 34 3 1 47 X:17924495-17924530 7 44 4735 FBgn0003380 28.61666667 0.493333333 0.783333333 1.537565521 89.18918919 56.17021277 2 2 2 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC X 18078953 18078959 - X_18078953_18078959_- 0.661615645 0.661615645 0.661615645 0 CG7536 FBtr0343317|FBtr0343318|FBtr0074530 18078489|18078861|18078861 18079653|18079653|18079653 X - 18078916 18079015 3'utr CG7536 FlyBase G68597.1 AACTAGAGCTGATCCCGAACGGAATTGTACATAGTATACGTATGCTAGTGCCTGTGTGTGTTCTTTTCGCTCTGCGTGTGTGTGTGTGTGTGTGAGTGTG 28 18078952 0.991302797 8 26 277 0.96969697 1.505149978 0.212121212 0.142857143 0.272727273 28 1 0 32 X:18078916-18079015 7 CG7536 FBtr0074530|FBtr0343317|FBtr0343318 18078861|18078489|18078861 18079653|18079653|18079653 TGTGTTC 7mer-m8 dme-miR-317-3p X - 18078916 18079031 5'utr-coding CG7536 FlyBase G51596.1 AAGTTTAAAGAACTTAAACTAGAGCTGATCCCGAACGGAATTGTACATAGTATACGTATGCTAGTGCCTGTGTGTGTTCTTTTCGCTCTGCGTGTGTGTGTGTGTGTGTGAGTGTG 20 18078952 0.984385208 14 20 176 1 1.431363764 0.185185185 0.25 0.444444444 20 0 0 27 X:18078916-18079031 7 16 4736 FBgn0030890 573.73 20 30.81333333 0.027887682 0.8 0.519255733 -7 -7 -7 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 18079078 18079083 - X_18079078_18079083_- 0.885290045 0.872851678 0.879070862 0.008795206 CG7536 FBtr0343317|FBtr0343317|FBtr0343317|FBtr0343318|FBtr0343318|FBtr0343318|FBtr0074531|FBtr0074531|FBtr0074531|FBtr0074530|FBtr0074530|FBtr0074530 18078489|18078489|18078489|18078861|18078861|18078861|18079015|18079015|18079015|18078861|18078861|18078861 18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653 X - 18079056 18079115 5'utr CG7536 FlyBase G68598.1 CTGTCCACCTGTTGATTGATATACGACATAGACTGTGACCAAATCGAAACTTAAACTAAA 147 18079086 0.781455878 12 122 714 0.971428571 1.929418926 0.297142857 0.143835616 0.285714286 146 4 1 170 X:18079056-18079115 6 CG7536 FBtr0074531|FBtr0074531|FBtr0074531|FBtr0074530|FBtr0074530|FBtr0074530|FBtr0343317|FBtr0343317|FBtr0343317|FBtr0343318|FBtr0343318|FBtr0343318 18079015|18079015|18079015|18078861|18078861|18078861|18078489|18078489|18078489|18078861|18078861|18078861 18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X - 18079060 18079140 5'utr CG7536 FlyBase G51597.1 TAGATCTGCCTTATCTGTTATCTGTCTGTCCACCTGTTGATTGATATACGACATAGACTGTGACCAAATCGAAACTTAAAC 101 18079081 0.750316737 14 97 571 0.99378882 1.903089987 0.298136646 0.356435644 0.596273292 101 0 1 160 X:18079060-18079140 6 101 4737 FBgn0030890 573.73 20 30.81333333 0.176040995 5.05 3.277801817 3 -2 0.5 0.1 dme-miR-252-5p 8mer-m1 GTACTTAG X 18079247 18079254 - X_18079247_18079254_- 0.636789032 0.635726463 0.636257747 0.000751301 CG7536 FBtr0343317|FBtr0343318|FBtr0074531|FBtr0074530 18078489|18078861|18079015|18078861 18079653|18079653|18079653|18079653 X - 18079236 18079299 5'utr CG7536 FlyBase G68600.1 AATCCATACCTTCCACAGAAATTGGAGTAGAGAACGGCAGTATTAGTACTTAGAAAAGGCGAAC 10 18079252 0.967788521 5 10 52 1 1.041392685 0.181818182 0.1 0.181818182 10 0 0 11 X:18079236-18079299 8 CG7536 FBtr0074531|FBtr0074530|FBtr0343317|FBtr0343318 18079015|18078861|18078489|18078861 18079653|18079653|18079653|18079653 GTACTTAG 8mer-m1 dme-miR-252-5p X - 18079245 18079300 5'utr CG7536 FlyBase G51598.1 TAATCCATACCTTCCACAGAAATTGGAGTAGAGAACGGCAGTATTAGTACTTAGAA 6 18079257 0.952381365 3 6 25 1 1 0 0.5 0.7 6 0 0 10 X:18079245-18079300 8 5.5 4738 FBgn0030890 573.73 20 30.81333333 0.009586391 0.275 0.178494158 -2 3 0.5 0.1 dme-miR-999-3p 6mer2-7 GTTAAC X 18079416 18079421 - X_18079416_18079421_- 0.89528302 0.999501438 0.947392229 0.073693537 CG7536 FBtr0343317|FBtr0343318|FBtr0074531|FBtr0074530 18078489|18078861|18079015|18078861 18079653|18079653|18079653|18079653 X - 18079409 18079447 5'utr CG7536 FlyBase G68602.1 AACTAATTTAGCATTCCACGTATGCGGTTAACTAACGAA 8 18079425 0.961995296 3 8 46 1 0.903089987 0 0 0 8 0 0 8 X:18079409-18079447 6 CG7536 FBtr0074531|FBtr0074530|FBtr0343317|FBtr0343318 18079015|18078861|18078489|18078861 18079653|18079653|18079653|18079653 GTTAAC 6mer2-7 dme-miR-999-3p X - 18079413 18079443 5'utr CG7536 FlyBase G51600.1 AATTTAGCATTCCACGTATGCGGTTAACTAA 5 18079425 0.792519449 2 5 37 1 0.903089987 0 0.6 0.75 5 0 0 8 X:18079413-18079443 6 6.5 4739 FBgn0030890 573.73 20 30.81333333 0.011329371 0.325 0.210947642 4 4 4 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA X 18079495 18079502 - X_18079495_18079502_- 0.499831726 0.498747725 0.499289726 0.000766504 CG7536 FBtr0343317|FBtr0343318|FBtr0074531|FBtr0074530 18078489|18078861|18079015|18078861 18079653|18079653|18079653|18079653 X - 18079452 18079532 5'utr CG7536 FlyBase G68603.1 GTTTAGCTAATTTGTATATTTAGTGACTAAGTACTTAAAATTGAGGAGAGACAATGTCCAGCAATAATTAGTGCATAAGAT 38 18079477 0.659099148 12 34 199 0.905660377 1.380211242 0.20754717 0.315789474 0.509433962 38 4 1 48 X:18079452-18079532 8 CG7536 FBtr0074531|FBtr0074530|FBtr0343317|FBtr0343318 18079015|18078861|18078489|18078861 18079653|18079653|18079653|18079653 GTACTTAA 8mer-A1 dme-miR-252-5p X - 18079458 18079518 5'utr CG7536 FlyBase G51601.1 TATATTTAGTGACTAAGTACTTAAAATTGAGGAGAGACAATGTCCAGCAATAATTAGTGCA 26 18079491 0.685501035 8 25 126 0.911764706 1.491361694 0.117647059 0.230769231 0.411764706 26 3 0 31 X:18079458-18079518 8 17.5 4740 FBgn0030890 573.73 20 30.81333333 0.030502153 0.875 0.567935958 -25 -11 -18 0.1 dme-miR-1006-3p 6mer3-8 CGAATT X 18079630 18079635 - X_18079630_18079635_- 0.502564567 0.502518854 0.50254171 3.23E-05 CG7536 FBtr0343317|FBtr0343318|FBtr0074531|FBtr0074530 18078489|18078861|18079015|18078861 18079653|18079653|18079653|18079653 X - 18079595 18079659 stop_codon CG7536 FlyBase G68604.1 TTGTAGGCAACGATGGCCGCCCACCGAATTGTGCTTCCTAATCAACGGTTTTGCGGAACGTCTTA 99 18079630 0.763937369 8 96 657 0.972972973 1.73239376 0.45045045 0.121212121 0.216216216 99 2 1 108 X:18079595-18079659 6 CG7536 FBtr0074531|FBtr0074530|FBtr0343317|FBtr0343318 18079015|18078861|18078489|18078861 18079653|18079653|18079653|18079653 CGAATT 6mer3-8 dme-miR-1006-3p X - 18079598 18079656 stop_codon CG7536 FlyBase G51602.1 TAGGCAACGATGGCCGCCCACCGAATTGTGCTTCCTAATCAACGGTTTTGCGGAACGTC 59 18079630 0.767527838 4 57 371 0.976470588 1.919078092 0.223529412 0.288135593 0.505882353 59 2 0 83 X:18079598-18079656 6 75.5 4741 FBgn0030890 573.73 20 30.81333333 0.131595001 3.775 2.450237992 -5 -5 -5 0.1 dme-miR-14-3p 6mer2-7 AGACTG X 18087720 18087725 + X_18087720_18087725_+ 0.999603324 0.999999994 0.999801659 0.000280509 dik FBtr0339540|FBtr0074510 18087677|18087581 18088418|18088418 X + 18087655 18087746 stop_codon dik FlyBase G62593.1 AGCCTCAAGCTGCAGTGCGTCTGAAGGAGCTGCTCCTCCTTACTCGCCACTCCTTTCATTTCGCCAGACTGTAAATTAGCCACGCTATTCGA 20 18087729 0.978189958 10 18 121 0.913043478 1.322219295 0.130434783 0.15 0.260869565 20 2 0 21 X:18087655-18087746 6 dik FBtr0339540|FBtr0074510 18087677|18087581 18088418|18088418 AGACTG 6mer2-7 dme-miR-14-3p X + 18087648 18087790 stop_codon dik FlyBase G47221.1 CGACGCTAGCCTCAAGCTGCAGTGCGTCTGAAGGAGCTGCTCCTCCTTACTCGCCACTCCTTTCATTTCGCCAGACTGTAAATTAGCCACGCTATTCGACACGTACACGTAGCCTCTAGTGTCCGCAATCCAAGTTGTGGACG 13 18087728 0.978801547 12 13 83 1 1.361727836 0.217391304 0.615384615 0.782608696 13 0 0 23 X:18087648-18087790 6 9 4742 FBgn0030891 215.6666667 9.88 15.20666667 0.041731066 0.910931174 0.591845682 -9 -8 -8.5 0.1 dme-miR-14-3p 6mer2-7 AGACTG X 18087933 18087938 + X_18087933_18087938_+ 0.999999843 0.99988834 0.999944091 7.88E-05 dik FBtr0339540|FBtr0074510 18087677|18087581 18088418|18088418 X + 18087844 18087985 3'utr dik FlyBase G62595.1 GAGTTTTGGCATTCGTTTTCCCCAAATCGAACGCCACTTTTGAGTCGTTTTCGACTAGCTTCCAAACCCGTATTCTTATCTTCGTCACCAGACTGTACATTAACAAAGATACATTAGCTCATAGAATGTAGTGTTCAAGATT 47 18087939 0.979101437 19 45 303 0.961538462 1.397940009 0.096153846 0.106382979 0.192307692 47 1 1 50 X:18087844-18087985 6 dik FBtr0339540|FBtr0074510 18087677|18087581 18088418|18088418 AGACTG 6mer2-7 dme-miR-14-3p X + 18087894 18087978 3'utr dik FlyBase G47223.1 TCGACTAGCTTCCAAACCCGTATTCTTATCTTCGTCACCAGACTGTACATTAACAAAGATACATTAGCTCATAGAATGTAGTGTT 41 18087938 0.777740845 14 39 268 0.967741935 1.477121255 0.129032258 0.390243902 0.596774194 41 1 1 60 X:18087894-18087978 6 29.5 4743 FBgn0030891 215.6666667 9.88 15.20666667 0.136785162 2.98582996 1.939938623 -6 -5 -5.5 0.1 dme-miR-980-5p 8mer-m1 GAAAAACT X 18088253 18088260 + X_18088253_18088260_+ 0.606366298 0.607154182 0.60676024 0.000557129 dik FBtr0339540|FBtr0074510 18087677|18087581 18088418|18088418 X + 18088215 18088275 3'utr dik FlyBase G62596.1 AGTGGAGGGTGAGATTCGCATTATTCGCTAAATGAACTGAAAAACTTTCCGCTACTGGAAT 11 18088247 0.989182469 2 8 83 0.75 0.954242509 0.583333333 0.090909091 0.166666667 11 3 0 9 X:18088215-18088275 8 dik FBtr0339540|FBtr0074510 18087677|18087581 18088418|18088418 GAAAAACT 8mer-m1 dme-miR-980-5p X + 18088232 18088277 3'utr dik FlyBase G47224.1 GCATTATTCGCTAAATGAACTGAAAAACTTTCCGCTACTGGAATTT 9 18088245 0.852040673 3 9 67 1 1.146128036 0.642857143 0.333333333 0.571428571 9 0 0 14 X:18088232-18088277 8 9 4744 FBgn0030891 215.6666667 9.88 15.20666667 0.041731066 0.910931174 0.591845682 6 8 7 0.1 dme-miR-34-5p 7mer-A1 ACTGCCA X 18088759 18088765 - X_18088759_18088765_- 0.821638688 0.820309768 0.820974228 0.000939674 CG7206 FBtr0089576|FBtr0308352 18088723|18088723 18089007|18089869 X - 18088733 18088826 3'utr CG7206 FlyBase G68622.1 GGCCACTGACGACGTGTTCACCCAAGACTAAAAACTTGCACATATTAGAAGATCAGATTTGACTGCCATTTGCTACGTATAATAAAGTTTGTTT 73 18088768 0.98128655 14 69 502 0.93902439 1.886490725 0.195121951 0.109589041 0.207317073 73 5 0 77 X:18088733-18088826 7 CG7206 FBtr0089576|FBtr0308352 18088723|18088723 18089007|18089869 ACTGCCA 7mer-A1 dme-miR-34-5p X - 18088749 18088826 3'utr CG7206 FlyBase G51613.1 GGCCACTGACGACGTGTTCACCCAAGACTAAAAACTTGCACATATTAGAAGATCAGATTTGACTGCCATTTGCTACGT 55 18088768 0.978579715 12 52 368 0.946808511 1.171238756 0.287234043 0.454545455 0.680851064 55 0 5 89 X:18088749-18088826 7 53 4745 FBgn0030892 243 18.00333333 27.36 0.218106996 2.943899278 1.937134503 3 3 3 0.1 dme-miR-282-5p 7mer-A1 GAGGCTA X 18089604 18089610 - X_18089604_18089610_- 0.43212083 0.430511636 0.431316233 0.001137876 CG7206 FBtr0308352 18088723 18089869 X - 18089499 18089634 5'utr CG7206 FlyBase G68627.1 GAGGCGCCACAGAAAGGTCAGGATGAGGCTAAGGAAGAGGACGACACTATATTGATGCTGCAGGCGGCCGATGCCGAGGAGCTGCCCCCAAGGCTTGAGGATTACATGTACTTTGTGCTGGACACCAACGTCCTCA 125 18089611 0.894010264 11 121 311 0.97826087 2.130333768 0.260869565 0.096 0.18115942 125 3 0 135 X:18089499-18089634 7 CG7206 FBtr0308352 18088723 18089869 GAGGCTA 7mer-A1 dme-miR-282-5p X - 18089564 18089635 5'utr CG7206 FlyBase G51619.1 GGAGGCGCCACAGAAAGGTCAGGATGAGGCTAAGGAAGAGGACGACACTATATTGATGCTGCAGGCGGCCGA 56 18089611 0.87827535 4 54 120 0.967391304 1.949390007 0.315217391 0.428571429 0.652173913 56 3 0 89 X:18089564-18089635 7 79.5 4746 FBgn0030892 243 18.00333333 27.36 0.327160494 4.415848917 2.905701754 1 1 1 0.1 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG X 18097086 18097092 + X_18097086_18097092_+ 0.702958211 0.702954932 0.702956571 2.33E-06 RhoGAP16F FBtr0074513|FBtr0307200|FBtr0307201|FBtr0343310 18096876|18096876|18096876|18096876 18097413|18097413|18097413|18097413 X + 18097057 18097112 3'utr RhoGAP16F FlyBase G62618.1 ATCCTCAACCCGAAACCGAACACCCCACTGTACCTGCCACACCTCTATACCCATTC 172 18097085 0.975605003 3 171 493 0.995024876 2.301029996 0 0.139534884 0.263681592 172 1 0 200 X:18097057-18097112 7 RhoGAP16F FBtr0307201|FBtr0074513|FBtr0343310|FBtr0307200 18096876|18096876|18096876|18096876 18097413|18097413|18097413|18097413 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" X + 18097060 18097109 3'utr RhoGAP16F FlyBase G47244.1 CTCAACCCGAAACCGAACACCCCACTGTACCTGCCACACCTCTATACCCA 84 18097085 0.972804142 2 82 245 0.968992248 1.795880017 0.007751938 0.357142857 0.581395349 84 3 1 125 X:18097060-18097109 7 127.5 4747 FBgn0030893 601.22 27.60666667 42.25333333 0.212068793 4.61844965 3.017513411 1 1 1 0.1 dme-miR-14-3p 6mer2-7 AGACTG X 18097710 18097715 - X_18097710_18097715_- 0.999987312 0.999998596 0.999992954 7.99E-06 CG7192 FBtr0074528|FBtr0074527|FBtr0310272 18097556|18097556|18097556 18098391|18098391|18098391 X - 18097631 18097750 3'utr CG7192 FlyBase G68632.1 CATATATCTATTACATATTAGCTCTAGTGACGATTAGACTGTATTGCAAAATCATAGATTCTTCCCAGCTGCCTCCGTCCCCGTCATCCGCATTCCCAGCTCCTTTTCGCCCCTCTTCCT 1121 18097717 0.987311583 18 1096 9676 0.979607251 2.635818721 0.069486405 0.149866191 0.28021148 1121 25 2 1297 X:18097631-18097750 6 CG7192 FBtr0074527|FBtr0310272|FBtr0074528 18097556|18097556|18097556 18098391|18098391|18098391 AGACTG 6mer2-7 dme-miR-14-3p X - 18097655 18097744 3'utr CG7192 FlyBase G51623.1 TCTATTACATATTAGCTCTAGTGACGATTAGACTGTATTGCAAAATCATAGATTCTTCCCAGCTGCCTCCGTCCCCGTCATCCGCATTCC 715 18097717 0.811940449 17 690 5858 0.970588235 1.909720566 0.061580882 0.384615385 0.595588235 715 20 12 1056 X:18097655-18097744 6 890 4748 FBgn0030894 672.5866667 40.63666667 62.49666667 1.323249544 21.90140267 14.24075951 2 2 2 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 18098008 18098013 - X_18098008_18098013_- 0.999952398 0.999971311 0.999961854 1.34E-05 CG7192 FBtr0074528|FBtr0074528|FBtr0074528|FBtr0074527|FBtr0074527|FBtr0074527|FBtr0310272|FBtr0310272|FBtr0310272 18097556|18097556|18097556|18097556|18097556|18097556|18097556|18097556|18097556 18098391|18098391|18098391|18098391|18098391|18098391|18098391|18098391|18098391 X - 18097979 18098049 3'utr CG7192 FlyBase G68635.1 ATATACATACATGCATCGATTAACCCCAAATCAAATTGTGATCAAAGGAGCGAGCGCAATGTTTTGTCATT 380 18098014 0.742963396 7 367 1673 0.967517401 1.620136055 0.062645012 0.121052632 0.225058005 380 5 9 417 X:18097979-18098049 6 CG7192 FBtr0074527|FBtr0074527|FBtr0074527|FBtr0310272|FBtr0310272|FBtr0310272|FBtr0074528|FBtr0074528|FBtr0074528 18097556|18097556|18097556|18097556|18097556|18097556|18097556|18097556|18097556 18098391|18098391|18098391|18098391|18098391|18098391|18098391|18098391|18098391 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 18097977 18098042 3'utr CG7192 FlyBase G51625.1 TACATGCATCGATTAACCCCAAATCAAATTGTGATCAAAGGAGCGAGCGCAATGTTTTGTCATTAA 210 18098014 0.954500981 6 200 915 0.959876543 1.53851788 0.067901235 0.419047619 0.62345679 210 5 8 311 X:18097977-18098042 6 291.5 4749 FBgn0030894 672.5866667 40.63666667 62.49666667 0.433401396 7.173324584 4.66424876 1 1 1 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT X 18098258 18098264 - X_18098258_18098264_- 0.658979265 0.658963913 0.658971589 1.09E-05 CG7192 FBtr0074528|FBtr0074527|FBtr0310272 18097556|18097556|18097556 18098391|18098391|18098391 X - 18098234 18098287 3'utr CG7192 FlyBase G68636.2 TAATCGCAAATAGATGCGCGTGTGGCAGCTGCCATGGTTAACCCAGTAGTTATT 171 18098265 0.841304419 9 167 783 0.99009901 2.301029996 0.287128713 0.152046784 0.282178218 171 2 0 200 X:18098234-18098287 7 CG7192 FBtr0074527|FBtr0310272|FBtr0074528 18097556|18097556|18097556 18098391|18098391|18098391 GGCAGCT 7mer-m8 dme-miR-980-3p X - 18098139 18098286 3'utr CG7192 FlyBase G51626.1 AATCGCAAATAGATGCGCGTGTGGCAGCTGCCATGGTTAACCCAGTAGTTATTCAGTTGGTATTAAGTTCTGAGGACCCCGGCCCCTTAGAGTAAAATGTGTGTAATATTCCTGTGCCTTCGATATGTATCTAATTTGGATGCTCGCC 134 18098265 0.841770574 21 131 638 0.984293194 2.274157849 0.308900524 0.305970149 0.513089005 134 3 0 188 X:18098139-18098286 7 139 4750 FBgn0030894 672.5866667 40.63666667 62.49666667 0.206664816 3.420556148 2.22411862 1 1 1 0.1 dme-miR-308-3p 8mer-m1 CTGTGATT X 18240797 18240804 - X_18240797_18240804_- 0.385559494 0.385560641 0.385560068 7.78E-07 upd2 FBtr0300182 18240652 18241347 X - 18240784 18240818 3'utr upd2 FlyBase G68658.1 AATGCTTAAATCTACTGTGATTTATTTTAAGTACT 24 18240797 0.713651948 3 23 254 0.965517241 1.447158031 0.310344828 0.166666667 0.310344828 24 1 0 28 X:18240784-18240818 8 upd2 FBtr0300182 18240652 18241347 CTGTGATT 8mer-m1 dme-miR-308-3p X - 18240786 18240816 3'utr upd2 FlyBase G51649.1 TGCTTAAATCTACTGTGATTTATTTTAAGTA 9 18240797 0.655473911 3 9 99 1 1 0.3 0.111111111 0.2 9 0 0 10 X:18240786-18240816 8 16.5 4751 FBgn0030904 6 0.38 0.586666667 2.75 43.42105263 28.125 -7 -7 -7 0.1 dme-miR-8-3p 8mer-A1 CAGTATTA X 18241279 18241286 - X_18241279_18241286_- 0.671698122 0.671697868 0.671697995 1.41E-07 upd2 FBtr0300182 18240652 18241347 X - 18241267 18241311 3'utr upd2 FlyBase G68661.1 CAGCCGGGTCAACATCACGCCCTTCCAGTATTATAGCGAGTACTT 13 18241288 0.774020328 4 11 83 0.866666667 0.812913357 0 0.153846154 0.266666667 13 1 1 13 X:18241267-18241311 8 upd2 FBtr0300182 18240652 18241347 CAGTATTA 8mer-A1 dme-miR-8-3p X - 18241273 18241301 3'utr upd2 FlyBase G51651.1 AACATCACGCCCTTCCAGTATTATAGCGA 6 18241288 0.838403907 2 5 32 0.888888889 0.903089987 0 0.333333333 0.555555556 6 1 0 8 X:18241273-18241301 8 9.5 4752 FBgn0030904 6 0.38 0.586666667 1.583333333 25 16.19318182 2 2 2 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA X 18284395 18284402 + X_18284395_18284402_+ 0.633710181 0.619621789 0.626665985 0.009962003 upd3 FBtr0113465|FBtr0113465|FBtr0113465 18283950|18283950|18283950 18284596|18284596|18284596 X + 18284359 18284417 3'utr upd3 FlyBase G62630.1 AAGTATACTAGATATACTTTGCCTTGTATTACGATGCTGTGATAGTAGATGATTAAAGT 34 18284393 0.766648922 8 27 289 0.8 1.028028724 0.55 0.176470588 0.3 34 6 2 32 X:18284359-18284417 8 upd3 FBtr0113465|FBtr0113465|FBtr0113465 18283950|18283950|18283950 18284596|18284596|18284596 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X + 18284368 18284419 3'utr upd3 FlyBase G47255.1 AGATATACTTTGCCTTGTATTACGATGCTGTGATAGTAGATGATTAAAGTAA 30 18284393 0.839112212 7 29 274 0.978723404 1.662757832 0.340425532 0.366666667 0.595744681 30 1 0 46 X:18284368-18284419 8 30 4753 FBgn0053542 45.60666667 2.493333333 3.816666667 0.657798567 12.03208556 7.860262009 2 2 2 0.1 dme-miR-980-3p 6mer2-7 GCAGCT X 18381611 18381616 - X_18381611_18381616_- 0.999994223 0.977993226 0.988993724 0.015557056 betaCOP FBtr0074576 18381547 18381707 X - 18381570 18381654 3'utr betaCOP FlyBase G68668.1 GACGACGTACTCGGCCACCTGCCCGCATTCCGCCAGCTGCAGCTTCTTCAATTTACATTACACGTTACAATTATACATAAAGAAT 92 18381627 0.755769915 14 89 510 0.971153846 2.004321374 0.096153846 0.130434783 0.230769231 92 3 0 101 X:18381570-18381654 6 betaCOP FBtr0074576 18381547 18381707 GCAGCT 6mer2-7 dme-miR-980-3p X - 18381599 18381743 stop_codon betaCOP FlyBase G51660.1 AGCTCCTCGCAGAAGCAGTCGGTGCAGGCGGCCTAGTGGACGTGGAACTGGACGTGGACGACCAGCCACCAGCAGGAGCGACGTATCTAGACGACGTACTCGGCCACCTGCCCGCATTCCGCCAGCTGCAGCTTCTTCAATTTAC 41 18381627 0.961680185 12 36 175 0.852459016 1.716003344 0.131147541 0.365853659 0.573770492 41 9 0 52 X:18381599-18381743 6 46.5 4754 FBgn0008635 1626.186667 61.00333333 93.07333333 0.028594503 0.762253429 0.499606045 11 11 11 0.1 dme-miR-184-5p 6mer2-7 GATAAG X 18495234 18495239 - X_18495234_18495239_- 0.999917138 0.999991556 0.999954347 5.27E-05 GalNAc-T2 FBtr0346082|FBtr0074625 18495065|18495182 18496408|18496408 X - 18495206 18495260 3'utr GalNAc-T2 FlyBase G68710.1 ATGTGTAACTTTAGAGTTATCGATAAGTCTGAATAATAGCATAGAAATAAAAACG 259 18495237 0.854606592 9 241 2091 0.912587413 2.416640507 0.311188811 0.084942085 0.171328671 259 25 0 261 X:18495206-18495260 6 GalNAc-T2 FBtr0074625|FBtr0346082 18495182|18495065 18496408|18496408 GATAAG 6mer2-7 dme-miR-184-5p X - 18495208 18495358 3'utr GalNAc-T2 FlyBase G51686.1 TGATTTTCGTAAAGCTCTCTGTACCAGGTAGTCGTAATCGTAATTGATCGTTGCAAGTGCTTCGGGAGTTTGATTTTTGAAAACAATATTTTACATTCATGTGTAACTTTAGAGTTATCGATAAGTCTGAATAATAGCATAGAAATAAAAA 153 18495237 0.989177313 15 127 1215 0.825471698 1.640978057 0.311320755 0.294117647 0.490566038 153 34 3 175 X:18495208-18495358 6 190 4755 FBgn0030930 489.5666667 17.31333333 26.39333333 0.388098318 10.974201 7.198787573 -2 -2 -2 0.1 dme-miR-283-5p 8mer-m1 TGATATTT X 18495772 18495779 - X_18495772_18495779_- 0.555593619 0.555570957 0.555582288 1.60E-05 GalNAc-T2 FBtr0346082|FBtr0074625 18495065|18495182 18496408|18496408 X - 18495674 18495854 3'utr GalNAc-T2 FlyBase G68714.1 GAAAATCATCACAATTAGCTGATAGTGAACCCATTCCCATTTCGATCGGCGAATCTCATACAATAGATATTCAATTGATATTTGGGAGGATCCAAGCCTGGGGGATTTCCGTGCCGACCTCGTGTGTGTGTGTCCTTGCGTATGAGTGAGAGAATGCGATGGGTATAGAGCGGAAGCGAAT 23 18495781 0.986558614 15 20 163 0.888888889 1.079181246 0.111111111 0.173913043 0.296296296 23 2 1 24 X:18495674-18495854 8 GalNAc-T2 FBtr0074625|FBtr0346082 18495182|18495065 18496408|18496408 TGATATTT 8mer-m1 dme-miR-283-5p X - 18495727 18495811 3'utr GalNAc-T2 FlyBase G51688.1 GATCGGCGAATCTCATACAATAGATATTCAATTGATATTTGGGAGGATCCAAGCCTGGGGGATTTCCGTGCCGACCTCGTGTGTG 12 18495780 0.985284187 6 12 74 1 1.380211242 0.25 0.583333333 0.791666667 12 0 0 24 X:18495727-18495811 8 5.5 4756 FBgn0030930 489.5666667 17.31333333 26.39333333 0.011234425 0.31767424 0.208385956 2 1 1.5 0.1 dme-miR-1012-3p 7mer-A1 TGACTAA X 18501798 18501804 - X_18501798_18501804_- 0.823348851 0.823344736 0.823346793 2.97E-06 Wnt5 FBtr0343046|FBtr0074623 18501399|18501554 18501837|18501837 X - 18501770 18501812 3'utr Wnt5 FlyBase G68723.1 AATGTTTGTGACTAAGCCATGAAGGAAATAATCGTATTTAAAC 6 18501809 0.982473773 4 6 32 1 0.954242509 0 0.5 0.666666667 6 0 0 9 X:18501770-18501812 7 Wnt5 FBtr0343046|FBtr0074623 18501399|18501554 18501837|18501837 TGACTAA 7mer-A1 dme-miR-1012-3p X - 18501782 18501839 stop_codon Wnt5 FlyBase G51694.1 AGAGCGTTGATTGAATTCGAATGTCTTAATGTTTGTGACTAAGCCATGAAGGAAATAA 8 18501793 0.933876318 5 7 36 1 1.230448921 0.588235294 0.875 0.941176471 8 0 0 17 X:18501782-18501839 7 5.5 4757 FBgn0010194 534.6666667 16.08666667 24.67666667 0.010286783 0.341898052 0.222882615 5 -11 -3 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 18520394 18520399 + X_18520394_18520399_+ 0.99998677 0.999986073 0.999986421 4.95E-07 Aats-his FBtr0333806|FBtr0333804|FBtr0074593|FBtr0333805 18520197|18520197|18520197|18520197 18520445|18520445|18520445|18520445 X + 18520300 18520408 3'utr Aats-his FlyBase G62663.1 ACGTTTTGTATTCTTGGTGTCCTGGCCGGAGGCGCCGCGTGCTACTATGCTTAGGTCTACAGTGTAACCATAGGAATAAGTGCGGACAACTTATACCAAAATGAACACT 72 18520393 0.876923305 17 69 393 0.9625 1.58546073 0.275 0.097222222 0.1875 72 2 1 77 X:18520300-18520408 6 Aats-his FBtr0333805|FBtr0074593|FBtr0333804|FBtr0333806 18520197|18520197|18520197|18520197 18520445|18520445|18520445|18520445 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 18520300 18520405 3'utr Aats-his FlyBase G47277.2 ACGTTTTGTATTCTTGGTGTCCTGGCCGGAGGCGCCGCGTGCTACTATGCTTAGGTCTACAGTGTAACCATAGGAATAAGTGCGGACAACTTATACCAAAATGAAC 56 18520393 0.907422703 15 52 310 0.92 1.361727836 0.12 0.232142857 0.426666667 56 4 2 69 X:18520300-18520405 6 25.5 4758 FBgn0027087 817.9566667 44.05 67.41 0.031175246 0.578887628 0.378282154 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 1852482 1852487 + X_1852482_1852487_+ 0.999902096 0.99999992 0.999951008 6.92E-05 CG42666 FBtr0332901|FBtr0332901|FBtr0332901|FBtr0302657|FBtr0302657|FBtr0302657|FBtr0302656|FBtr0302656|FBtr0302656|FBtr0302655|FBtr0302655|FBtr0302655|FBtr0309968|FBtr0309968|FBtr0309968|FBtr0309967|FBtr0309967|FBtr0309967|FBtr0309969|FBtr0309969|FBtr0309969|FBtr0302654|FBtr0302654|FBtr0302654|FBtr0302658|FBtr0302658|FBtr0302658|FBtr0309966|FBtr0309966|FBtr0309966|FBtr0302659|FBtr0302659|FBtr0302659 1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459 1853667|1853667|1853667|1852866|1852866|1852866|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1853667|1853667|1853667 X + 1852426 1852619 stop_codon CG42666 FlyBase G58062.1 GTGAGCTGGATCCCGCTTGGAGCTGGGACGATTAGAGGACTCGTTCGGGTGCGAATCTGTGACATTTGGGGTGGGGTGGGGCATTGGGGGATGGGCAGCAAGTACTTTTAGTTGTTAAGCCAGCTCGTAATAGTACTGTATTCAAAAAGAAAAACACAATCGTAAAATCTCAGCTGGGTATCTCTCCTGGCAAT 133 1852481 0.813179732 34 113 825 0.871794872 1.531478917 0.384615385 0.165413534 0.288461538 133 17 3 136 X:1852426-1852619 6 CG42666 FBtr0309967|FBtr0309967|FBtr0309967|FBtr0309969|FBtr0309969|FBtr0309969|FBtr0302655|FBtr0302655|FBtr0302655|FBtr0309968|FBtr0309968|FBtr0309968|FBtr0302657|FBtr0302657|FBtr0302657|FBtr0332901|FBtr0332901|FBtr0332901|FBtr0302659|FBtr0302659|FBtr0302659|FBtr0309966|FBtr0309966|FBtr0309966|FBtr0302656|FBtr0302656|FBtr0302656|FBtr0302658|FBtr0302658|FBtr0302658|FBtr0302654|FBtr0302654|FBtr0302654 1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459 1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852866|1852866|1852866|1853667|1853667|1853667|1853667|1853667|1853667|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X + 1852428 1852619 stop_codon CG42666 FlyBase G43925.1 GAGCTGGATCCCGCTTGGAGCTGGGACGATTAGAGGACTCGTTCGGGTGCGAATCTGTGACATTTGGGGTGGGGTGGGGCATTGGGGGATGGGCAGCAAGTACTTTTAGTTGTTAAGCCAGCTCGTAATAGTACTGTATTCAAAAAGAAAAACACAATCGTAAAATCTCAGCTGGGTATCTCTCCTGGCAAT 89 1852481 0.981583078 24 77 555 0.888888889 1.630088715 0.243055556 0.449438202 0.659722222 89 14 2 128 X:1852428-1852619 6 41 4759 FBgn0261548 1054.043333 36.35 55.79666667 0.038897832 1.127922971 0.734810921 1 1 1 0.1 dme-miR-12-5p 6mer2-7 ATACTC X 1853220 1853225 + X_1853220_1853225_+ 0.999918419 0.999982829 0.999950624 4.55E-05 CG42666 FBtr0332901|FBtr0302659 1852459|1852459 1853667|1853667 X + 1853196 1853234 3'utr CG42666 FlyBase G58065.1 TTTTTTTAACGAATAAAGCATCTCATACTCGTATACAAA 17 1853221 0.747268691 3 17 91 1 1.322219295 0 0.235294118 0.380952381 17 0 0 21 X:1853196-1853234 6 CG42666 FBtr0332901|FBtr0302659 1852459|1852459 1853667|1853667 ATACTC 6mer2-7 dme-miR-12-5p X + 1853196 1853230 3'utr CG42666 FlyBase G43929.1 TTTTTTTAACGAATAAAGCATCTCATACTCGTATA 9 1853221 0.741003281 2 9 53 1 1.146128036 0.071428571 0.444444444 0.642857143 9 0 0 14 X:1853196-1853230 6 13 4760 FBgn0261548 1054.043333 36.35 55.79666667 0.012333459 0.357634113 0.232988828 -1 -1 -1 0.1 dme-miR-276a-3p 7mer-A1 GTTCCTA X 1853525 1853531 + X_1853525_1853531_+ 0.823292992 0.823312473 0.823302732 1.38E-05 CG42666 FBtr0332901|FBtr0302659 1852459|1852459 1853667|1853667 X + 1853499 1853551 3'utr CG42666 FlyBase G58068.1 GAGGAGCACTTTAATTGAAAATCGATGTTCCTAGCAGAATAAGTTTCAGCACA 53 1853524 0.949692328 2 52 278 0.985074627 1.819543936 0.447761194 0.188679245 0.358208955 53 1 0 66 X:1853499-1853551 7 CG42666 FBtr0332901|FBtr0302659 1852459|1852459 1853667|1853667 GTTCCTA 7mer-A1 dme-miR-276a-3p X + 1853511 1853550 3'utr CG42666 FlyBase G43930.1 AATTGAAAATCGATGTTCCTAGCAGAATAAGTTTCAGCAC 38 1853524 0.726038478 4 37 199 0.983333333 1.469822016 0.4 0.421052632 0.633333333 38 0 1 59 X:1853511-1853550 7 45 4761 FBgn0261548 1054.043333 36.35 55.79666667 0.042692742 1.237964237 0.806499791 1 1 1 0.1 dme-miR-13b-2-5p 6mer2-7 TTGACG X 18571554 18571559 + X_18571554_18571559_+ 0.999946229 0.999917244 0.999931736 2.05E-05 Bx FBtr0340365|FBtr0340364|FBtr0340366|FBtr0340363|FBtr0340367 18570935|18570935|18570935|18570935|18571268 18571726|18571726|18572809|18571726|18571726 X + 18571519 18571574 3'utr Bx FlyBase G62668.1 CCACTACATACTGTACATATTTTCCTTGTAAACTGTTGACGTATTAGCGGGATCCT 12 18571555 0.984178398 4 12 98 1 1.079181246 0.083333333 0 0 12 0 0 12 X:18571519-18571574 6 Bx FBtr0340366|FBtr0340363|FBtr0340365|FBtr0340364|FBtr0340367 18570935|18570935|18570935|18570935|18571268 18572809|18571726|18571726|18571726|18571726 TTGACG 6mer2-7 dme-miR-13b-2-5p X + 18571541 18571575 3'utr Bx FlyBase G47282.1 TCCTTGTAAACTGTTGACGTATTAGCGGGATCCTT 5 18571555 0.974366194 2 5 43 1 0.903089987 0.625 0.6 0.75 5 0 0 8 X:18571541-18571575 6 7.5 4762 FBgn0265598 121.1466667 5.323333333 8.24 0.061908431 1.408891672 0.910194175 -1 -1 -1 0.1 dme-miR-282-5p 7mer-A1 GAGGCTA X 18572070 18572076 + X_18572070_18572076_+ 0.823229337 0.79917602 0.811202678 0.017008252 Bx FBtr0340366 18570935 18572809 X + 18572047 18572097 3'utr Bx FlyBase G62669.1 ATTATTTAAGTTTAGTTTAGTGCGAGGCTAAAGAATGTTCTTTCCACGGCG 16 18572075 0.968843636 4 16 176 1 1.255272505 0.222222222 0.125 0.222222222 16 0 0 18 X:18572047-18572097 7 Bx FBtr0340366 18570935 18572809 GAGGCTA 7mer-A1 dme-miR-282-5p X + 18572015 18572079 3'utr Bx FlyBase G47284.1 ATTTTAAGTCTGTTGGAGCAACGTTGTTGATTATTATTTAAGTTTAGTTTAGTGCGAGGCTAAAG 8 18572062 0.799982577 6 7 57 1 1.113943352 0.615384615 0.375 0.615384615 8 0 0 13 X:18572015-18572079 7 10 4763 FBgn0265598 121.1466667 5.323333333 8.24 0.082544574 1.878522229 1.213592233 -5 8 1.5 0.1 dme-bantam-3p 7mer-A1 GATCTCA X 1862231 1862237 - X_1862231_1862237_- 0.822025259 0.822486076 0.822255668 0.000325835 CG14814 FBtr0070369|FBtr0070370|FBtr0339494 1862133|1862133|1862007 1862327|1862327|1862327 X - 1862212 1862272 3'utr CG14814 FlyBase G64071.1 TGGTATATCATAGACAATTTGAAAAACTTAACTGAGATCTCAGTTCGTGCGAAGTAGTAGA 12 1862240 0.973021708 4 12 80 1 1.146128036 0.142857143 0.166666667 0.285714286 12 0 0 14 X:1862212-1862272 7 CG14814 FBtr0339494|FBtr0070370|FBtr0070369 1862007|1862133|1862133 1862327|1862327|1862327 GATCTCA 7mer-A1 dme-bantam-3p X - 1862222 1862253 3'utr CG14814 FlyBase G48303.1 TGAAAAACTTAACTGAGATCTCAGTTCGTGCG 5 1862240 0.706221503 2 5 32 1 0.77815125 0 0.2 0.333333333 5 0 0 6 X:1862222-1862253 7 7 4764 FBgn0023515 470.3333333 16.16 24.75 0.014883062 0.433168317 0.282828283 3 3 3 0.1 dme-miR-999-3p 7mer-A1 GTTAACA X 18624336 18624342 - X_18624336_18624342_- 0.823349314 0.82334919 0.823349252 7.07E-08 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 X - 18624265 18624364 3'utr wgn FlyBase G68734.1 AACGCATATAGACGCACGTATTGTTAACATCACCCATATCCCATATCCTAGTACTAGTATCCAGAGTAAACAGTATCCTATAATCCCACCAACAACACAC 18 18624341 0.978538704 9 16 103 0.894736842 1.230448921 0 0.055555556 0.105263158 18 2 0 17 X:18624265-18624364 7 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 GTTAACA 7mer-A1 dme-miR-999-3p X - 18624314 18624363 3'utr wgn FlyBase G51702.1 ACGCATATAGACGCACGTATTGTTAACATCACCCATATCCCATATCCTAG 15 18624342 0.985775645 5 13 102 0.882352941 0.875061263 0 0.133333333 0.235294118 15 1 1 15 X:18624314-18624363 7 12 4765 FBgn0030941 765.4933333 38.51666667 59.04666667 0.015676165 0.31155344 0.203229084 -1 0 -0.5 0.1 dme-miR-190-5p 8mer-A1 ACATATCA X 18624381 18624388 - X_18624381_18624388_- 0.612816138 0.612817319 0.612816728 8.49E-07 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 X - 18624365 18624426 3'utr wgn FlyBase G68735.1 ATCGTTGCGGAGTGGAACGAAACCAAGTAATATTGGCAACATATCAGCTTCTATATGCATGG 14 18624394 0.987569503 8 10 114 0.705882353 1.079181246 0.058823529 0.214285714 0.352941176 14 5 0 12 X:18624365-18624426 8 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 ACATATCA 8mer-A1 dme-miR-190-5p X - 18624366 18624407 3'utr wgn FlyBase G51703.1 AAACCAAGTAATATTGGCAACATATCAGCTTCTATATGCATG 7 18624398 0.851995796 6 7 52 1 1.079181246 0 0.428571429 0.666666667 7 0 0 12 X:18624366-18624407 8 9.5 4766 FBgn0030941 765.4933333 38.51666667 59.04666667 0.012410297 0.246646473 0.160889692 6 10 8 0.1 dme-miR-2a-2-5p 7mer-m1 GATGAGG X 18624546 18624552 - X_18624546_18624552_- 0.825568716 0.825559564 0.82556414 6.43E-06 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 X - 18624454 18624599 3'utr wgn FlyBase G68736.1 TGGGAATCCCGAGCGATGCGGCAAAATGTTTTGTACATACTCGTAGAGATGAGGCATGTGGCACCGCCCACGTATACCCACGTATATGATAGAAGCGATTTAGATTAACAAATCTCTACTTAATGTAAATATTAAGGCGATCGAAC 153 18624550 0.912189723 20 146 744 0.952095808 1.599337133 0.191616766 0.091503268 0.167664671 153 5 3 159 X:18624454-18624599 7 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 GATGAGG 7mer-m1 dme-miR-2a-2-5p X - 18624474 18624652 3'utr wgn FlyBase G51704.1 TGTTGACTTGTTTGTAATGCGCGGACAGTTGAGGACGCGGGCTTCCCGTTGTGTGGGAATCCCGAGCGATGCGGCAAAATGTTTTGTACATACTCGTAGAGATGAGGCATGTGGCACCGCCCACGTATACCCACGTATATGATAGAAGCGATTTAGATTAACAAATCTCTACTTAATGT 124 18624550 0.924158568 21 121 586 0.983783784 2.260071388 0.308108108 0.379032258 0.583783784 124 3 0 182 X:18624474-18624652 7 101 4767 FBgn0030941 765.4933333 38.51666667 59.04666667 0.131941058 2.622241454 1.71051146 -2 -2 -2 0.1 dme-miR-305-5p 7mer-A1 GTACAAA X 18624777 18624783 - X_18624777_18624783_- 0.782911048 0.782911175 0.782911111 1.41E-07 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 X - 18624707 18624833 3'utr wgn FlyBase G68738.1 ACGATACGCAAACGGAACCGGAAACGTAAATGGATTAGAGAAAGAACTTTGTACAAACAGCCGCTTAAAAGTAGGAGGAGGACGGAGGAAGGAAACCGAAACTATTATTATTTTTTATATTATTAAT 192 18624785 0.949667208 10 183 734 0.956896552 2.045322979 0.211206897 0.171875 0.314655172 192 9 1 222 X:18624707-18624833 7 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 GTACAAA 7mer-A1 dme-miR-305-5p X - 18624727 18624862 3'utr wgn FlyBase G51705.1 GCGGGACGAAGCGAGAATGGATCCGGAACACGATACGCAAACGGAACCGGAAACGTAAATGGATTAGAGAAAGAACTTTGTACAAACAGCCGCTTAAAAGTAGGAGGAGGACGGAGGAAGGAAACCGAAACTATTA 161 18624785 0.931806281 12 153 561 0.94893617 2.047274867 0.293617021 0.354037267 0.557446809 161 11 1 223 X:18624727-18624862 7 152.5 4768 FBgn0030941 765.4933333 38.51666667 59.04666667 0.199217934 3.959324968 2.582702947 2 2 2 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA X 18635679 18635684 - X_18635679_18635684_- 0.9999995 0.983712456 0.991855978 0.011516648 Rip11 FBtr0343020|FBtr0343020|FBtr0343021|FBtr0343021|FBtr0301545|FBtr0301545|FBtr0343019|FBtr0343019|FBtr0074616|FBtr0074616 18635640|18635640|18635640|18635640|18635640|18635640|18635640|18635640|18635640|18635640 18636833|18636833|18636312|18636312|18636312|18636312|18636833|18636833|18637354|18637354 X - 18635667 18635717 3'utr Rip11 FlyBase G68744.1 CACAGTTGAAATATGTTGATACTACAATGATTTTACTTATTGATATAAACG 20 18635689 0.745427231 11 17 180 0.863636364 1.278753601 0.318181818 0.1 0.181818182 20 3 0 19 X:18635667-18635717 6 Rip11 FBtr0074616|FBtr0074616|FBtr0343019|FBtr0343019|FBtr0301545|FBtr0301545|FBtr0343021|FBtr0343021|FBtr0343020|FBtr0343020 18635640|18635640|18635640|18635640|18635640|18635640|18635640|18635640|18635640|18635640 18637354|18637354|18636833|18636833|18636312|18636312|18636312|18636312|18636833|18636833 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" X - 18635660 18635720 3'utr Rip11 FlyBase G51709.1 ACACACAGTTGAAATATGTTGATACTACAATGATTTTACTTATTGATATAAACGCAAGCAA 12 18635690 0.978335919 7 12 99 1 1.278753601 0 0.5 0.684210526 12 0 0 19 X:18635660-18635720 6 8.5 4769 FBgn0027335 6668.076667 280.47 431.2966667 0.00127473 0.030306272 0.019708012 5 6 5.5 0.1 dme-miR-317-3p 6mer3-8 TGTGTT X 18635907 18635912 - X_18635907_18635912_- 0.657712268 0.990935629 0.824323948 0.235624455 Rip11 FBtr0343020|FBtr0343021|FBtr0301545|FBtr0343019|FBtr0074616 18635640|18635640|18635640|18635640|18635640 18636833|18636312|18636312|18636833|18637354 X - 18635896 18635968 3'utr Rip11 FlyBase G68746.1 AAGCGATTTGTCGTGTTGCGAGTCCTTGTCAATTGATTGAAATTATCCGAAAGTATTGTGTTTGTTTTTTTGT 15 18635913 0.829821829 9 15 139 1 1.255272505 0.111111111 0.2 0.333333333 15 0 0 18 X:18635896-18635968 6 Rip11 FBtr0074616|FBtr0343019|FBtr0301545|FBtr0343021|FBtr0343020 18635640|18635640|18635640|18635640|18635640 18637354|18636833|18636312|18636312|18636833 TGTGTT 6mer3-8 dme-miR-317-3p X - 18635902 18635961 3'utr Rip11 FlyBase G51711.1 TTGTCGTGTTGCGAGTCCTTGTCAATTGATTGAAATTATCCGAAAGTATTGTGTTTGTTT 14 18635926 0.984816777 7 14 115 1 1.342422681 0.227272727 0.428571429 0.636363636 14 0 0 22 X:18635902-18635961 6 8 4770 FBgn0027335 6668.076667 280.47 431.2966667 0.001199746 0.02852355 0.018548717 1 14 7.5 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA X 18636806 18636813 - X_18636806_18636813_- 0.625358399 0.625362496 0.625360448 2.90E-06 Rip11 FBtr0343020|FBtr0343019|FBtr0074616 18635640|18635640|18635640 18636833|18636833|18637354 X - 18636755 18636833 5'utr Rip11 FlyBase G68750.1 GTGCTGCGCATGTTGCAAATTGCATTTAAGTAGACACTTAACCAACAAATCCCAACAACAACAACATCACCACCACCAA 47 18636814 0.983310187 5 45 344 0.981818182 1.73239376 0.309090909 0.170212766 0.290909091 47 1 0 54 X:18636755-18636833 8 Rip11 FBtr0074616|FBtr0343019|FBtr0343020 18635640|18635640|18635640 18637354|18636833|18636833 TGCATTTA 8mer-A1 dme-miR-277-3p X - 18636784 18636835 stop_codon Rip11 FlyBase G51716.1 AAGTGCTGCGCATGTTGCAAATTGCATTTAAGTAGACACTTAACCAACAAAT 27 18636814 0.844795357 4 25 202 0.973684211 1.568201724 0.421052632 0.37037037 0.552631579 27 1 0 37 X:18636784-18636835 8 35.5 4771 FBgn0027335 6668.076667 280.47 431.2966667 0.005323874 0.126573252 0.082309934 1 1 1 0.1 dme-miR-2a-2-5p 7mer-A1 GATGAGA X 18653527 18653533 - X_18653527_18653533_- 0.78287778 0.78277062 0.7828242 7.58E-05 CG6659 FBtr0074613|FBtr0074612 18653390|18653390 18653985|18653985 X - 18653513 18653594 3'utr CG6659 FlyBase G68778.1 AAATACTTTCGTTAAGTTTAAGCTAAGCTTTTTACATTTACGCATGTAGTATACATATGACGATGAGACGCGTGTGGCAACG 12 18653531 0.974475456 5 11 72 1 1.113943352 0 0.083333333 0.153846154 12 0 0 13 X:18653513-18653594 7 CG6659 FBtr0074613|FBtr0074612 18653390|18653390 18653985|18653985 GATGAGA 7mer-A1 dme-miR-2a-2-5p X - 18653496 18653556 3'utr CG6659 FlyBase G51739.1 TACGCATGTAGTATACATATGACGATGAGACGCGTGTGGCAACGAAAGTGGCTGCATGTGG 17 18653531 0.974934976 3 16 70 1 1.414973348 0.038461538 0.411764706 0.615384615 17 0 0 26 X:18653496-18653556 7 11 4772 FBgn0030946 482.2966667 17.24333333 26.43666667 0.022807539 0.637927702 0.416088766 -2 -2 -2 0.1 dme-miR-283-5p 6mer3-8 TGATAT X 18653779 18653784 - X_18653779_18653784_- 1 1 1 0 CG6659 FBtr0074613|FBtr0074612 18653390|18653390 18653985|18653985 X - 18653741 18653818 3'utr CG6659 FlyBase G68779.1 AATCCCAAATCCCGATCCCGCGTAGTAGCTGATTTGATATGGCAGATTGGCGATTAGAAGGAGGCCCCTTCCGCTAGA 10 18653772 0.958460538 6 10 49 1 1.041392685 0.363636364 0.1 0.181818182 10 0 0 11 X:18653741-18653818 6 CG6659 FBtr0074613|FBtr0074612 18653390|18653390 18653985|18653985 TGATAT 6mer3-8 dme-miR-283-5p X - 18653743 18653844 3'utr CG6659 FlyBase G51741.1 CGGATGCCCGAACACATCTCGCACCCAATCCCAAATCCCGATCCCGCGTAGTAGCTGATTTGATATGGCAGATTGGCGATTAGAAGGAGGCCCCTTCCGCTA 8 18653779 0.974690541 7 8 41 1 1.204119983 0.125 0.625 0.8125 8 0 0 16 X:18653743-18653844 6 4 4773 FBgn0030946 482.2966667 17.24333333 26.43666667 0.008293651 0.23197371 0.151305006 -12 -5 -8.5 0.1 dme-miR-1008-3p 7mer-m8 AGCTGTG X 18653909 18653915 - X_18653909_18653915_- 0.631022401 0.643476352 0.637249376 0.008806308 CG6659 FBtr0074613|FBtr0074612 18653390|18653390 18653985|18653985 X - 18653831 18653992 stop_codon CG6659 FlyBase G68780.1 CATATAGGGCTGGCCGTCCACGGAGGCGGCGCGATGATGGAATGCTGGAATCGTGTTGTGTTGTACGTAGCTGTGTGAGCTGTGTGACTAGGATTTAGCATTTTACGATGTGTGTGTATTATGATTACGTTTAGTATTGCCCCAACCTCGGATGCCCGAACA 45 18653917 0.882371976 19 41 353 0.92 1.662757832 0.22 0.111111111 0.2 45 4 0 46 X:18653831-18653992 7 CG6659 FBtr0074613|FBtr0074612 18653390|18653390 18653985|18653985 AGCTGTG 7mer-m8 dme-miR-1008-3p X - 18653857 18654001 stop_codon CG6659 FlyBase G51742.1 CGAGATGTCCATATAGGGCTGGCCGTCCACGGAGGCGGCGCGATGATGGAATGCTGGAATCGTGTTGTGTTGTACGTAGCTGTGTGAGCTGTGTGACTAGGATTTAGCATTTTACGATGTGTGTGTATTATGATTACGTTTAGTA 43 18653917 0.982407413 15 40 306 0.954545455 1.799340549 0.303030303 0.348837209 0.575757576 43 3 0 63 X:18653857-18654001 7 26 4774 FBgn0030946 482.2966667 17.24333333 26.43666667 0.053908728 1.507829113 0.983482537 2 2 2 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA X 18661019 18661024 + X_18661019_18661024_+ 0.999991505 1 0.999995752 6.01E-06 fu FBtr0074602 18660455 18661204 X + 18661004 18661049 3'utr fu FlyBase G62688.1 ATTCAAGTGTGGTTTGTGCAAAATAGATTGATAGCATTATAGTTTG 10 18661017 0.72867858 3 8 86 0.909090909 1 0.181818182 0.1 0.181818182 10 1 0 10 X:18661004-18661049 6 fu FBtr0074602 18660455 18661204 GTGCAA 6mer3-8 dme-miR-92b-3p X + 18661002 18661058 3'utr fu FlyBase G47299.1 ATATTCAAGTGTGGTTTGTGCAAAATAGATTGATAGCATTATAGTTTGTATATCGAA 12 18661016 0.84731103 6 11 110 0.947368421 1.255272505 0.421052632 0.333333333 0.578947368 12 1 0 18 X:18661002-18661058 6 8.5 4775 FBgn0001079 159.36 5.946666667 9.103333333 0.053338353 1.429372197 0.933723911 2 3 2.5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 18781249 18781254 + X_18781249_18781254_+ 0.999999999 1 1 0 CG6891 FBtr0074631|FBtr0334453|FBtr0074632 18781193|18781193|18781193 18781345|18781345|18781345 X + 18781229 18781320 3'utr CG6891 FlyBase G62699.1 TTTGCAACTCTTAACTGCTTACCAAACTGCTCCTTTCTCTTTAATTATTATGAATTAATTTTATGAAATTTAAAAACTGTACATTTTATGAA 47 18781263 0.788561177 13 40 418 0.859649123 1.088136089 0.087719298 0.14893617 0.298245614 47 5 3 49 X:18781229-18781320 6 CG6891 FBtr0334453|FBtr0074632|FBtr0074631 18781193|18781193|18781193 18781345|18781345|18781345 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 18781239 18781283 3'utr CG6891 FlyBase G47310.1 TTAACTGCTTACCAAACTGCTCCTTTCTCTTTAATTATTATGAAT 33 18781257 0.721924709 8 32 306 0.977272727 1.33243846 0.022727273 0.272727273 0.454545455 33 0 1 43 X:18781239-18781283 6 34.5 4776 FBgn0030955 851.42 106.5933333 161.8266667 0.040520542 0.323660016 0.213191069 -14 -8 -11 0.1 dme-miR-263a-5p 6mer2-7 TGCCAT X 18786305 18786310 - X_18786305_18786310_- 0.984940828 0.988050552 0.98649569 0.002198961 CG6961 FBtr0074660 18786140 18786460 X - 18786273 18786331 3'utr CG6961 FlyBase G68801.1 TAGACTAGTTTAAGTGAATTCTGCCATGTCTGTCCACTTTAGAATTTTGTGTTTAGTGA 9 18786305 0.983133943 5 7 80 0.888888889 0.903089987 0.333333333 0 0 9 1 0 8 X:18786273-18786331 6 CG6961 FBtr0074660 18786140 18786460 TGCCAT 6mer2-7 dme-miR-263a-5p X - 18786266 18786322 3'utr CG6961 FlyBase G51752.1 TTAAGTGAATTCTGCCATGTCTGTCCACTTTAGAATTTTGTGTTTAGTGAGTAAAAT 6 18786303 0.979914662 5 6 47 1 1 0 0.666666667 0.8 6 0 0 10 X:18786266-18786322 6 5 4777 FBgn0030959 210.0433333 13.48333333 20.56333333 0.023804612 0.370828183 0.24315124 -5 -7 -6 0.1 dme-miR-986-5p 7mer-m8 ATTCGAG X 18786361 18786367 - X_18786361_18786367_- 0.63078805 0.399258303 0.515023177 0.163716292 CG6961 FBtr0074660 18786140 18786460 X - 18786333 18786376 3'utr CG6961 FlyBase G68801.2 GCTTATAAAATTCGAGTCGATCCATCCAGCGTATGTTTAGCAAA 10 18786366 0.767929484 5 10 55 1 1.041392685 0.727272727 0.1 0.181818182 10 0 0 11 X:18786333-18786376 7 CG6961 FBtr0074660 18786140 18786460 ATTCGAG 7mer-m8 dme-miR-986-5p X - 18786340 18786390 3'utr CG6961 FlyBase G51753.1 CATTTTCATTTCGCGCTTATAAAATTCGAGTCGATCCATCCAGCGTATGTT 8 18786376 0.758290143 4 7 69 0.888888889 0.602059991 0.111111111 0.125 0.222222222 8 0 1 8 X:18786340-18786390 7 8.5 4778 FBgn0030959 210.0433333 13.48333333 20.56333333 0.04046784 0.630407911 0.413357108 -1 9 4 0.1 dme-miR-252-5p 6mer3-8 GTACTT X 18793314 18793319 + X_18793314_18793319_+ 0.680061951 0.652436421 0.666249186 0.019534249 Atg101 FBtr0074635 18792553 18793517 X + 18793253 18793405 3'utr Atg101 FlyBase G62716.1 TGTTTAGATCGAGGCAAGTAGCGGTGAGGCGGTAGAAATGTATGTATAAAAGATTGTGATTGTACTTGTAGTGATTAAACTATAGTACGGACTCCATGTATCCATGGATATCCAATATGTAGACATGTATGTATGTAAATCAATGTTTATCTA 428 18793313 0.99077693 22 402 4174 0.941176471 1.490426721 0.348884381 0.140186916 0.253549696 428 15 14 464 X:18793253-18793405 6 Atg101 FBtr0074635 18792553 18793517 GTACTT 6mer3-8 dme-miR-252-5p X + 18793255 18793389 3'utr Atg101 FlyBase G47323.1 TTTAGATCGAGGCAAGTAGCGGTGAGGCGGTAGAAATGTATGTATAAAAGATTGTGATTGTACTTGTAGTGATTAAACTATAGTACGGACTCCATGTATCCATGGATATCCAATATGTAGACATGTATGTATGTA 347 18793313 0.990353791 18 328 3332 0.940740741 1.927712462 0.368518519 0.409221902 0.62037037 347 27 5 508 X:18793255-18793389 6 372.5 4779 FBgn0030960 179.3333333 11.9 18.35333333 2.077137546 31.30252101 20.29604068 1 1 1 0.1 dme-miR-252-5p 6mer3-8 GTACTT X 18793437 18793442 + X_18793437_18793442_+ 0.999997649 0.999989743 0.999993696 5.59E-06 Atg101 FBtr0074635 18792553 18793517 X + 18793428 18793468 3'utr Atg101 FlyBase G62717.1 ACGATAAATGTACTTTACGACTTAACTAATATTGTAAAATC 17 18793442 0.736639763 6 16 125 1 1.255272505 0.055555556 0.058823529 0.111111111 17 0 0 18 X:18793428-18793468 6 Atg101 FBtr0074635 18792553 18793517 GTACTT 6mer3-8 dme-miR-252-5p X + 18793427 18793454 3'utr Atg101 FlyBase G47324.1 AACGATAAATGTACTTTACGACTTAACT 6 18793441 0.796787092 3 6 41 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 X:18793427-18793454 6 10.5 4780 FBgn0030960 179.3333333 11.9 18.35333333 0.058550186 0.882352941 0.57210316 -5 -4 -4.5 0.1 dme-miR-184-5p 8mer-m1 TGATAAGG X 1881446 1881453 - X_1881446_1881453_- 0.614713881 0.614712494 0.614713188 9.90E-07 trr FBtr0070362|FBtr0070363 1881311|1881311 1882155|1882155 X - 1881418 1881483 3'utr trr FlyBase G64099.1 TCGTGCGCAACCTTCTTTGAATATATACACTGATAAGGATATGAACACCTACTTCTATTTTATTTT 21 1881460 0.961421611 9 20 159 0.958333333 1.361727836 0.25 0.142857143 0.25 21 1 0 23 X:1881418-1881483 8 trr FBtr0070362|FBtr0070363 1881311|1881311 1882155|1882155 TGATAAGG 8mer-m1 dme-miR-184-5p X - 1881430 1881477 3'utr trr FlyBase G48319.1 GCAACCTTCTTTGAATATATACACTGATAAGGATATGAACACCTACTT 15 1881459 0.954735205 6 13 96 0.818181818 0.954242509 0.318181818 0.4 0.590909091 15 3 1 18 X:1881430-1881477 8 14 4781 FBgn0023518 907.1566667 13.24 20.31 0.015432836 1.057401813 0.689315608 7 6 6.5 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA X 1881842 1881847 - X_1881842_1881847_- 0.994144044 0.997483457 0.995813751 0.002361383 trr FBtr0070362|FBtr0070363 1881311|1881311 1882155|1882155 X - 1881828 1881948 3'utr trr FlyBase G64103.1 TTATATGCTATATGCAGATATGCTCGTGGAGAGCATATGACCTTGTAAGTTTTGTATATGTGCCCACTGTAGCCAATTCGTATCCTTTATATCGCTCTTAAGTGCAAAAGTGGAGAGTGTC 23 1881850 0.871893938 9 22 179 0.903225806 1.447158031 0.129032258 0.217391304 0.419354839 23 3 0 28 X:1881828-1881948 6 trr FBtr0070362|FBtr0070363 1881311|1881311 1882155|1882155 GTGCAA 6mer3-8 dme-miR-92b-3p X - 1881831 1881932 3'utr trr FlyBase G48321.1 GATATGCTCGTGGAGAGCATATGACCTTGTAAGTTTTGTATATGTGCCCACTGTAGCCAATTCGTATCCTTTATATCGCTCTTAAGTGCAAAAGTGGAGAGT 8 1881850 0.976102413 5 8 60 1 1.176091259 0.266666667 0.5 0.733333333 8 0 0 15 X:1881831-1881932 6 5 4782 FBgn0023518 907.1566667 13.24 20.31 0.005511727 0.377643505 0.246184146 3 3 3 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA X 18831927 18831933 + X_18831927_18831933_+ 0.823220399 0.822313157 0.822766778 0.000641487 CG7101 FBtr0074639 18831799 18832123 X + 18831868 18831974 3'utr CG7101 FlyBase G62725.1 ATACTTAAGCAATGGATAAATGTAACGTTTTAATAGCGTTAATATTTTGAATTTATATCCTAGTCATCGGAAATGTTTTTCCAAACGAACTTGAATTTAAAATCGTA 150 18831925 0.884279782 16 145 1192 0.964071856 2.206825876 0.233532934 0.093333333 0.185628743 150 6 0 161 X:18831868-18831974 7 CG7101 FBtr0074639 18831799 18832123 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X + 18831752 18831972 stop_codon CG7101 FlyBase G47329.1 CTTCCGGGCCATCGATCTCGAACGGCATGTGTGTGAGGAACATCCGTAGGGCAGTCAACCTAGCCGGAATCGTAGATACCTGAGCGACATCTCACGTCCAGAACTACGATTAATATATACTTAAGCAATGGATAAATGTAACGTTTTAATAGCGTTAATATTTTGAATTTATATCCTAGTCATCGGAAATGTTTTTCCAAACGAACTTGAATTTAAAATCG 153 18831925 0.983825919 29 132 1005 0.884057971 1.359361103 0.289855072 0.296052632 0.483091787 152 17 7 183 X:18831752-18831972 7 113.5 4783 FBgn0030963 43.33333333 3.66 5.636666667 2.619230769 31.01092896 20.13601419 2 2 2 0.1 dme-miR-252-5p 7mer-m8 GTACTTA X 18832091 18832097 + X_18832091_18832097_+ 0.588288106 0.58829582 0.588291963 5.44E-06 CG7101 FBtr0074639 18831799 18832123 X + 18831986 18832115 3'utr CG7101 FlyBase G62726.1 GCTGTAAAATTAATGCTTATGAGACGATTTACATTTACATCTTAGGAACTATAGACATAAGCGAATAGTTACTTTAATATAGCAAGCAGATGGCTGAAAGACAATGTACTTATATGAATAAAAAAATATC 186 18832090 0.881927067 14 179 1100 0.966346154 2.002166062 0.240384615 0.107526882 0.201923077 186 6 1 201 X:18831986-18832115 7 CG7101 FBtr0074639 18831799 18832123 GTACTTA 7mer-m8 dme-miR-252-5p X + 18832056 18832110 3'utr CG7101 FlyBase G47330.1 ACTTTAATATAGCAAGCAGATGGCTGAAAGACAATGTACTTATATGAATAAAAAA 120 18832090 0.867756336 8 116 656 0.975490196 2.298853076 0.205882353 0.408333333 0.651960784 120 5 0 199 X:18832056-18832110 7 120 4784 FBgn0030963 43.33333333 3.66 5.636666667 2.769230769 32.78688525 21.289178 1 1 1 0.1 dme-miR-307a-3p 7mer-m8 GGTTGTG X 18841222 18841228 + X_18841222_18841228_+ 0.492226407 0.698282288 0.595254347 0.145703524 Pvf1 FBtr0343604 18841137 18842901 X + 18841157 18841373 3'utr Pvf1 FlyBase G62736.1 CAGGGATCCACGGGCAGGGATTGGTTGCGATCCGGTCTGGTCTGATCTGGTCTGGTCTGGGGAACGGTTGTGCTCGTCCTTGGTTGGTTTGCGGTTGGTTCCTGGTGGTGGCTCCCTAGCTTAAGCTGTCCCAACAAGTTCCTCGCTTATTTATTATAGCCATTTCGTACAGTTGATAGTTTTCTGGCAAATAATAGAATTACTTAATAGAATTTAA 93 18841213 0.98972878 38 87 760 0.943396226 1.397940009 0.377358491 0.129032258 0.235849057 93 3 3 100 X:18841157-18841373 7 Pvf1 FBtr0343604 18841137 18842901 GGTTGTG 7mer-m8 dme-miR-307a-3p X + 18841184 18841273 3'utr Pvf1 FlyBase G47336.1 CGATCCGGTCTGGTCTGATCTGGTCTGGTCTGGGGAACGGTTGTGCTCGTCCTTGGTTGGTTTGCGGTTGGTTCCTGGTGGTGGCTCCCT 31 18841225 0.740815313 17 28 241 0.895833333 1.33243846 0.5625 0.419354839 0.625 31 4 1 43 X:18841184-18841273 7 20 4785 FBgn0030964 2.333333333 0.133333333 0.206666667 8.571428571 150 96.77419355 9 -3 3 0.1 dme-miR-8-3p 7mer-A1 AGTATTA X 18841758 18841764 + X_18841758_18841764_+ 0.823349562 0.823283667 0.823316614 4.66E-05 Pvf1 FBtr0343604 18841137 18842901 X + 18841716 18841788 3'utr Pvf1 FlyBase G62738.1 ACTTCTGTTTCTTTTGTGTTTCGTTTTAGATTAAAAATGTCGAGTATTATTCTTAGAGTCCACAAAAAAAAAA 17 18841753 0.988638716 6 17 164 1 1.278753601 0.105263158 0.117647059 0.210526316 17 0 0 19 X:18841716-18841788 7 Pvf1 FBtr0343604 18841137 18842901 AGTATTA 7mer-A1 dme-miR-8-3p X + 18841708 18841765 3'utr Pvf1 FlyBase G47338.1 ATGTTTTTACTTCTGTTTCTTTTGTGTTTCGTTTTAGATTAAAAATGTCGAGTATTAT 5 18841753 0.986884832 3 5 54 1 0.77815125 0 0.2 0.333333333 5 0 0 6 X:18841708-18841765 7 9.5 4786 FBgn0030964 2.333333333 0.133333333 0.206666667 4.071428571 71.25 45.96774194 5 5 5 0.1 dme-miR-965-3p 6mer2-7 ACGCTT X 18842250 18842255 + X_18842250_18842255_+ 0.839374019 0.999411735 0.919392877 0.113163743 Pvf1 FBtr0343604 18841137 18842901 X + 18842219 18842274 3'utr Pvf1 FlyBase G62740.1 CGGCTGCACCCATCGATGTCTTGGATCGCAAACGCTTCATTGTCCAGGCGGTACAG 10 18842258 0.960072926 7 10 56 1 1.041392685 0.181818182 0.1 0.181818182 10 0 0 11 X:18842219-18842274 6 Pvf1 FBtr0343604 18841137 18842901 ACGCTT 6mer2-7 dme-miR-965-3p X + 18842222 18842278 3'utr Pvf1 FlyBase G47341.1 CTGCACCCATCGATGTCTTGGATCGCAAACGCTTCATTGTCCAGGCGGTACAGGTGG 8 18842258 0.980662148 4 7 49 0.928571429 0.812913357 0.142857143 0.375 0.642857143 8 0 1 13 X:18842222-18842278 6 7 4787 FBgn0030964 2.333333333 0.133333333 0.206666667 3 52.5 33.87096774 -8 -8 -8 0.1 dme-miR-932-5p 7mer-m8 GGAATTG X 18842396 18842402 + X_18842396_18842402_+ 0.548941713 0.617563665 0.583252689 0.048523082 Pvf1 FBtr0074640|FBtr0343604|FBtr0301667 18842309|18841137|18842309 18842901|18842901|18842901 X + 18842287 18842421 stop_codon Pvf1 FlyBase G62741.1 AACACCACCCTGTACAGTGTTTGAGGACAGTTGGTTCGCCACGGAGTACGAAGTAGAAACGCCAGCCTCCTAGCGGGGAATCCCCGAGTACTGAGAAGGCAATTGCCGGGGAATTGCACCGTGTACTTTATAATA 147 18842390 0.960377548 16 135 538 0.941520468 1.729704621 0.34502924 0.172413793 0.298245614 145 8 2 161 X:18842287-18842421 7 Pvf1 FBtr0074640|FBtr0343604|FBtr0301667 18842309|18841137|18842309 18842901|18842901|18842901 GGAATTG 7mer-m8 dme-miR-932-5p X + 18842345 18842413 3'utr Pvf1 FlyBase G47343.1 ACGCCAGCCTCCTAGCGGGGAATCCCCGAGTACTGAGAAGGCAATTGCCGGGGAATTGCACCGTGTACT 85 18842390 0.815611642 7 79 281 0.944 2.071882007 0.496 0.305882353 0.528 85 7 0 118 X:18842345-18842413 7 92 4788 FBgn0030964 2.333333333 0.133333333 0.206666667 39.42857143 690 445.1612903 6 6 6 0.1 dme-miR-8-3p 7mer-A1 AGTATTA X 18861866 18861872 - X_18861866_18861872_- 0.823345811 0.823349465 0.823347638 2.62E-06 CG7326 FBtr0074653|FBtr0333159 18861558|18861195 18862233|18862233 X - 18861838 18861878 3'utr CG7326 FlyBase G68814.1 GCAACAAGTATTAGCTGGATAAACGACTTCTATATATATGT 5 18861868 0.963782656 3 4 25 1 0.84509804 0.571428571 0.4 0.571428571 5 0 0 7 X:18861838-18861878 7 CG7326 FBtr0074653|FBtr0333159 18861558|18861195 18862233|18862233 AGTATTA 7mer-A1 dme-miR-8-3p X - 18861832 18861883 3'utr CG7326 FlyBase G51764.1 GTTTTGCAACAAGTATTAGCTGGATAAACGACTTCTATATATATGTATGTAC 8 18861878 0.890229103 6 8 58 1 1.113943352 0.230769231 0.5 0.692307692 8 0 0 13 X:18861832-18861883 7 4.5 4789 FBgn0030970 277.82 13.14 20.1 0.016197538 0.342465753 0.223880597 -4 6 1 0.1 dme-miR-14-3p 7mer-A1 AGACTGA X 18879407 18879413 + X_18879407_18879413_+ 0.823133699 0.823263463 0.823198581 9.18E-05 CG34401 FBtr0112653|FBtr0333160 18878120|18878120 18880636|18884075 X + 18879390 18879431 3'utr CG34401 FlyBase G62782.1 GTGCGTGTGAGCATTTTAGACTGAGATATCTGCCAACAACAA 81 18879405 0.674951499 9 81 560 1 1.973127854 0.021276596 0.160493827 0.276595745 81 0 0 94 X:18879390-18879431 7 CG34401 FBtr0333160|FBtr0112653 18878120|18878120 18884075|18880636 AGACTGA 7mer-A1 dme-miR-14-3p X + 18879380 18879468 3'utr CG34401 FlyBase G47365.1 GTGTGTGTGTGTGCGTGTGAGCATTTTAGACTGAGATATCTGCCAACAACAACAAATACCGATGCCCACACACAGGCACACACCCACGC 39 18879405 0.977934613 11 37 251 0.965517241 1.447158031 0 0.384615385 0.586206897 39 1 1 56 X:18879380-18879468 7 57.5 4790 FBgn0085430 1429.756667 16.81 26.06 0.040216634 3.420582986 2.206446662 2 2 2 0.1 dme-miR-317-3p 8mer-A1 TGTGTTCA X 18879539 18879546 + X_18879539_18879546_+ 0.631011421 0.631106743 0.631059082 6.74E-05 CG34401 FBtr0112653|FBtr0333160 18878120|18878120 18880636|18884075 X + 18879504 18879664 3'utr CG34401 FlyBase G62784.1 GGAAGTTGGAAAAGCTCTGTTTGATTTTTCAAAAATGTGTTCAGTTAAACTAACGTATTTATAGAGATGATCTATCAAATAGTTTTCTACACCGACAGCTATATGAAAAAGAACTCGGACTTTTACATATATGCTTACGATCCCTAGACCTAACTTTAAAT 53 18879539 0.874685887 18 47 447 0.887096774 1.263241435 0.048387097 0.150943396 0.274193548 53 5 2 55 X:18879504-18879664 8 CG34401 FBtr0333160|FBtr0112653 18878120|18878120 18884075|18880636 TGTGTTCA 8mer-A1 dme-miR-317-3p X + 18879506 18879579 3'utr CG34401 FlyBase G47366.1 AAGTTGGAAAAGCTCTGTTTGATTTTTCAAAAATGTGTTCAGTTAAACTAACGTATTTATAGAGATGATCTATC 25 18879539 0.830932442 9 22 227 0.923076923 1.556302501 0.025641026 0.4 0.615384615 25 3 0 36 X:18879506-18879579 8 21 4791 FBgn0085430 1429.756667 16.81 26.06 0.014687814 1.249256395 0.805832694 0 0 0 0.1 dme-bantam-3p 7mer-A1 GATCTCA X 18879923 18879929 + X_18879923_18879929_+ 0.823321026 0.821556564 0.822438795 0.001247619 CG34401 FBtr0112653|FBtr0333160 18878120|18878120 18880636|18884075 X + 18879912 18879938 3'utr CG34401 FlyBase G62786.1 AACTAGCAAACGATCTCAACTAAAGTA 20 18879915 0.872009704 2 18 61 0.925925926 1.397940009 0.222222222 0.2 0.407407407 20 2 0 25 X:18879912-18879938 7 CG34401 FBtr0333160|FBtr0112653 18878120|18878120 18884075|18880636 GATCTCA 7mer-A1 dme-bantam-3p X + 18879911 18879936 3'utr CG34401 FlyBase G47368.1 CAACTAGCAAACGATCTCAACTAAAG 9 18879915 0.815933272 2 8 26 0.928571429 1.113943352 0.071428571 0.555555556 0.714285714 9 1 0 13 X:18879911-18879936 7 14.5 4792 FBgn0085430 1429.756667 16.81 26.06 0.010141586 0.862581797 0.556408289 8 8 8 0.1 dme-miR-11-3p 8mer-m1 CTGTGATG X 18887517 18887524 + X_18887517_18887524_+ 0.462274223 0.462274223 0.462274223 0 CG7332 FBtr0342877|FBtr0074647 18887445|18887445 18888860|18887605 X + 18887481 18887547 3'utr CG7332 FlyBase G62800.1 AGGTGTGCCAGAATCGCATGGAACGGCATGGACATACTGTGATGGAGGAAACACTGATGTAAACAGA 46 18887515 0.957914001 7 40 190 0.884615385 1.361727836 0.403846154 0.130434783 0.230769231 46 5 1 46 X:18887481-18887547 8 CG7332 FBtr0342877|FBtr0074647 18887445|18887445 18888860|18887605 CTGTGATG 8mer-m1 dme-miR-11-3p X + 18887495 18887549 3'utr CG7332 FlyBase G47376.1 CGCATGGAACGGCATGGACATACTGTGATGGAGGAAACACTGATGTAAACAGAAG 34 18887511 0.765145744 5 29 136 0.890625 1.755874856 0.59375 0.558823529 0.765625 34 7 0 57 X:18887495-18887549 8 38 4793 FBgn0030973 1168.416667 41.72 64.31666667 0.032522645 0.910834132 0.590826639 2 6 4 0.1 dme-miR-1012-3p 6mer3-8 TTGACT X 1891898 1891903 - X_1891898_1891903_- 0.71927211 0.698645793 0.708958951 0.014584997 arm FBtr0089990 1891399 1892098 X - 1891787 1891924 stop_codon arm FlyBase G64126.1 TTGATGCCGGTGCATTGAACTTTGACTTGGACGCCATGCCGACGCCACCCAATGACAACAACAACCTGGCTGCCTGGTACGATACCGATTGTTAGACAAGCCGAGCTAAGGGTAAGGGTCGAGTATCCATTCGACCCC 54 1891903 0.879473949 15 51 278 0.936507937 1.293730757 0.19047619 0.166666667 0.285714286 54 2 2 59 X:1891787-1891924 6 arm FBtr0089990 1891399 1892098 TTGACT 6mer3-8 dme-miR-1012-3p X - 1891873 1891959 3'utr arm FlyBase G48336.2 TTCGCCCTATTCCATGGACATGGACGTTGGCGAGATTGATGCCGGTGCATTGAACTTTGACTTGGACGCCATGCCGACGCCACCCAA 27 1891903 0.970933498 7 23 156 0.916666667 1.217483944 0.166666667 0.307692308 0.5 26 2 1 33 X:1891873-1891959 6 23 4794 FBgn0000117 5213.67 200.9433333 306.79 0.00441148 0.11446013 0.074969849 0 0 0 0.1 dme-miR-263a-5p 6mer2-7 TGCCAT X 19025639 19025644 + X_19025639_19025644_+ 0.634357808 0.915794137 0.775075972 0.199005516 CG43759 FBtr0331156|FBtr0332994|FBtr0343982 19013347|19013347|19013347 19026872|19028629|19026872 X + 19025614 19025693 3'utr CG43759 FlyBase G62814.1 GGAATACAATACAAAGACTGCCTCATGCCATGCCATCCACTATTACCACCAACCCAACAGCGGCAGCAGCTATAGCAACT 26 19025644 0.964802389 7 24 114 0.878787879 1.462397998 0.060606061 0.192307692 0.363636364 26 4 0 29 X:19025614-19025693 6 CG43759 FBtr0343982|FBtr0332994|FBtr0331156 19013347|19013347|19013347 19026872|19028629|19026872 TGCCAT 6mer2-7 dme-miR-263a-5p X + 19025614 19025719 3'utr CG43759 FlyBase G47384.1 GGAATACAATACAAAGACTGCCTCATGCCATGCCATCCACTATTACCACCAACCCAACAGCGGCAGCAGCTATAGCAACTACAGTAGCCGTCGTCACCATCAGCAT 23 19025644 0.964634068 7 19 103 0.823529412 0.748188027 0.147058824 0.304347826 0.529411765 23 2 4 28 X:19025614-19025719 6 17.5 4795 FBgn0264090 9.64 0.236666667 0.363333333 1.815352697 73.94366197 48.16513761 -5 -5 -5 0.1 dme-miR-283-5p 8mer-m1 TGATATTT X 19028303 19028310 + X_19028303_19028310_+ 0.501874245 0.545272989 0.523573617 0.030687586 CG43759 FBtr0332994 19013347 19028629 X + 19028285 19028323 3'utr CG43759 FlyBase G62823.1 AACAAAAAGCTTAAAATGTGATATTTTATAAAAACTAAT 9 19028297 0.831170776 4 8 79 0.888888889 0.602059991 0 0 0 9 0 1 8 X:19028285-19028323 8 CG43759 FBtr0332994 19013347 19028629 TGATATTT 8mer-m1 dme-miR-283-5p X + 19028288 19028322 3'utr CG43759 FlyBase G47391.1 AAAAAGCTTAAAATGTGATATTTTATAAAAACTAA 7 19028308 0.670984184 4 6 58 0.818181818 0.954242509 0 0.428571429 0.636363636 7 2 0 9 X:19028288-19028322 8 8 4796 FBgn0264090 9.64 0.236666667 0.363333333 0.829875519 33.8028169 22.01834862 6 -5 0.5 0.1 dme-miR-283-5p 7mer-m8 TGATATT X 19136286 19136292 - X_19136286_19136292_- 0.615956507 0.617279151 0.616617829 0.00093529 RhoGAP18B FBtr0299623 19136105 19143584 X - 19136184 19136311 3'utr RhoGAP18B FlyBase G68832.1 TTACATCGTGTATAAGATGTGATATTCGCTGCAAATCGCAAAGCGTGAATATAATTTGTATTTATACCTATATTAATGAACCATATAAAATATACGAATAAAGTCCAATACAGTAGATAGGCTACACA 108 19136287 0.860845719 15 103 806 0.946153846 1.788875116 0.469230769 0.175925926 0.315384615 108 6 1 123 X:19136184-19136311 7 RhoGAP18B FBtr0299623 19136105 19143584 TGATATT 7mer-m8 dme-miR-283-5p X - 19136251 19136309 3'utr RhoGAP18B FlyBase G51775.2 ACATCGTGTATAAGATGTGATATTCGCTGCAAATCGCAAAGCGTGAATATAATTTGTAT 80 19136287 0.725032888 9 77 588 0.968992248 2.096910013 0.472868217 0.45 0.658914729 80 4 0 125 X:19136251-19136309 7 84.5 4797 FBgn0261461 2047.33 61.32666667 94.48 0.041273268 1.377867159 0.894369179 -5 -5 -5 0.1 dme-miR-34-5p 7mer-m8 CACTGCC X 19136353 19136359 - X_19136353_19136359_- 0.708952336 0.708953365 0.708952851 7.78E-07 RhoGAP18B FBtr0299623 19136105 19143584 X - 19136337 19136380 3'utr RhoGAP18B FlyBase G68833.1 ACATTGTGGCGGTACAGTGAGCACTGCCTGCGGCCAACCTAAAA 27 19136352 0.818924862 4 27 112 1 1.505149978 0.4375 0.185185185 0.3125 27 0 0 32 X:19136337-19136380 7 RhoGAP18B FBtr0299623 19136105 19143584 CACTGCC 7mer-m8 dme-miR-34-5p X - 19136336 19136382 3'utr RhoGAP18B FlyBase G51776.1 AAACATTGTGGCGGTACAGTGAGCACTGCCTGCGGCCAACCTAAAAA 25 19136352 0.811062377 4 24 106 0.95 1.579783597 0.4 0.44 0.65 25 2 0 38 X:19136336-19136382 7 26 4798 FBgn0261461 2047.33 61.32666667 94.48 0.012699467 0.423959126 0.275190517 -7 -7 -7 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 19136463 19136468 - X_19136463_19136468_- 0.999246811 0.999234285 0.999240548 8.84E-06 RhoGAP18B FBtr0299623 19136105 19143584 X - 19136412 19136509 3'utr RhoGAP18B FlyBase G68834.1 AAATGGGAATTCGCATAGACGAGCCCATCACGAAAATACTTACCAAAAAAGACAGTAGACTAAGTTTATACTAAAGATAATTAGGGGAAACCGCAAGA 289 19136469 0.957733101 11 257 1219 0.887537994 1.766412847 0.285714286 0.131487889 0.237082067 289 33 4 292 X:19136412-19136509 6 RhoGAP18B FBtr0299623 19136105 19143584 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X - 19136412 19136481 3'utr RhoGAP18B FlyBase G51777.1 CACGAAAATACTTACCAAAAAAGACAGTAGACTAAGTTTATACTAAAGATAATTAGGGGAAACCGCAAGA 199 19136469 0.952415018 9 167 757 0.833876221 1.806179974 0.231270358 0.40201005 0.61237785 199 48 3 256 X:19136412-19136481 6 223.5 4799 FBgn0261461 2047.33 61.32666667 94.48 0.109166573 3.644417872 2.365580017 1 1 1 0.1 dme-miR-79-3p 7mer-A1 AGCTTTA X 19136566 19136572 - X_19136566_19136572_- 0.823349562 0.823349562 0.823349562 0 RhoGAP18B FBtr0299623 19136105 19143584 X - 19136534 19136581 3'utr RhoGAP18B FlyBase G68835.1 TTTGTTGTCAGCTTTAAATGTACGTGTTTTATTGCTAATTTTAATGTT 9 19136568 0.984049746 7 9 92 1 1.230448921 0.058823529 0.444444444 0.705882353 9 0 0 17 X:19136534-19136581 7 RhoGAP18B FBtr0299623 19136105 19143584 AGCTTTA 7mer-A1 dme-miR-79-3p X - 19136533 19136579 3'utr RhoGAP18B FlyBase G51778.1 TGTTGTCAGCTTTAAATGTACGTGTTTTATTGCTAATTTTAATGTTC 7 19136575 0.995096408 5 5 64 0.636363636 0.84509804 0 0.285714286 0.545454545 7 4 0 7 X:19136533-19136579 7 6 4800 FBgn0261461 2047.33 61.32666667 94.48 0.002930646 0.097836721 0.063505504 -4 3 -0.5 0.1 dme-miR-184-5p 6mer3-8 TGATAA X 1915348 1915353 + X_1915348_1915353_+ 0.944935186 0.963107277 0.954021231 0.012849615 Rbcn-3B FBtr0070316|FBtr0344155 1915333|1915333 1916174|1916825 X + 1915328 1915382 stop_codon Rbcn-3B FlyBase G58116.1 TGTCTAAGGTGAAGGAGCAATGATAATGGACTAGTGAATCTTGCGGGATGTATAG 47 1915354 0.92109143 4 46 244 0.981132075 1.414973348 0.490566038 0.106382979 0.20754717 47 0 1 52 X:1915328-1915382 6 Rbcn-3B FBtr0344155|FBtr0070316 1915333|1915333 1916825|1916174 TGATAA 6mer3-8 dme-miR-184-5p X + 1915328 1915393 stop_codon Rbcn-3B FlyBase G43967.1 TGTCTAAGGTGAAGGAGCAATGATAATGGACTAGTGAATCTTGCGGGATGTATAGCATGTTATTAG 39 1915354 0.963868934 5 38 201 1 1.819543936 0.515151515 0.538461538 0.727272727 39 0 0 66 X:1915328-1915393 6 41.5 4801 FBgn0023510 935.05 16.80666667 25.86333333 0.044382653 2.469258231 1.60458822 -6 -6 -6 0.1 dme-miR-2535b-3p 7mer-m1 CGTGAGT X 1915556 1915562 + X_1915556_1915562_+ 0.765586662 0.765586592 0.765586627 7.07E-08 Rbcn-3B FBtr0070316|FBtr0344155 1915333|1915333 1916174|1916825 X + 1915525 1915572 5'utr Rbcn-3B FlyBase G58117.1 GAAAATAAAAGTGCGGTAATGTATGGCGTTTCGTGAGTAGTTAAGGTA 10 1915547 0.939869701 6 9 73 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 X:1915525-1915572 7 Rbcn-3B FBtr0344155|FBtr0070316 1915333|1915333 1916825|1916174 CGTGAGT 7mer-m1 dme-miR-2535b-3p X + 1915535 1915572 5'utr Rbcn-3B FlyBase G43968.1 GTGCGGTAATGTATGGCGTTTCGTGAGTAGTTAAGGTA 5 1915546 0.763833871 4 4 39 1 1 0.1 0.6 0.8 5 0 0 10 X:1915535-1915572 7 6 4802 FBgn0023510 935.05 16.80666667 25.86333333 0.006416769 0.35700119 0.231988658 9 10 9.5 0.1 dme-miR-970-3p 6mer3-8 TCTTAT X 1915784 1915789 + X_1915784_1915789_+ 0.99999999 0.999999903 0.999999947 7.07E-08 Rbcn-3B FBtr0070316|FBtr0344155 1915333|1915333 1916174|1916825 X + 1915740 1915901 5'utr Rbcn-3B FlyBase G58118.1 CGTATCTGTATGTATTTTAATGTATTACACGATTTTAATATGTCTCTTATTCGCCCCTCTGCGTTCTTTTTAATTTTTAGTGCCTAACTTTTACCCATACTCTTAGAACACGTATTTCTGTTTCTGTTTCTGTTTCTGTTTGTCGTTAATTTCCAATGCGGA 25 1915797 0.990431798 14 25 258 1 1.531478917 0.117647059 0.28 0.470588235 25 0 0 34 X:1915740-1915901 6 Rbcn-3B FBtr0344155|FBtr0070316 1915333|1915333 1916825|1916174 TCTTAT 6mer3-8 dme-miR-970-3p X + 1915786 1915809 5'utr Rbcn-3B FlyBase G43969.1 TTATTCGCCCCTCTGCGTTCTTTT 6 1915806 0.640503434 3 6 51 1 1.041392685 0 0.666666667 0.818181818 6 0 0 11 X:1915786-1915809 3 6 4803 FBgn0023510 935.05 16.80666667 25.86333333 0.006416769 0.35700119 0.231988658 -13 -22 -17.5 0.1 dme-miR-1008-3p 6mer3-8 AGCTGT X 1916032 1916037 + X_1916032_1916037_+ 0.999999985 0.999984814 0.999992399 1.07E-05 Rbcn-3B FBtr0070316|FBtr0344155 1915333|1915333 1916174|1916825 X + 1915965 1916080 5'utr Rbcn-3B FlyBase G58119.1 AAGCAAACACAACTACACGAGAAAAGCAAAGGAAATGAAAAACGAAAAAAAAAAACAAAGAATGAAAAGCTGTTATTATTATTACTCAACTATTATTATTACTATTGTATGCTACT 24 1916040 0.989185921 9 20 167 0.833333333 1.096910013 0 0.208333333 0.366666667 24 4 1 25 X:1915965-1916080 6 Rbcn-3B FBtr0344155|FBtr0070316 1915333|1915333 1916825|1916174 AGCTGT 6mer3-8 dme-miR-1008-3p X + 1916013 1916089 5'utr Rbcn-3B FlyBase G43970.1 AAAAAAACAAAGAATGAAAAGCTGTTATTATTATTACTCAACTATTATTATTACTATTGTATGCTACTATTATTATT 11 1916040 0.995025947 6 8 108 0.571428571 0.903089987 0.071428571 0.181818182 0.357142857 11 6 0 8 X:1916013-1916089 6 12 4804 FBgn0023510 935.05 16.80666667 25.86333333 0.012833538 0.71400238 0.463977317 -8 -8 -8 0.1 dme-miR-252-5p 6mer3-8 GTACTT X 19176929 19176934 - X_19176929_19176934_- 0.999999999 1 0.999999999 0 CG7556 FBtr0343313 19176107 19177281 X - 19176910 19176968 3'utr CG7556 FlyBase G68880.1 TGTCAGGGATAAAGCCATCGATGATAGATACGGTGTACTTCCAGGTTAGTAACTAATAA 6 19176932 0.985865214 4 6 44 1 0.77815125 0.333333333 0 0 6 0 0 6 X:19176910-19176968 6 CG7556 FBtr0343313 19176107 19177281 GTACTT 6mer3-8 dme-miR-252-5p X - 19176920 19176959 3'utr CG7556 FlyBase G51808.1 TAAAGCCATCGATGATAGATACGGTGTACTTCCAGGTTAG 7 19176938 0.789307022 3 5 42 0.8 0.602059991 0.4 0.285714286 0.5 7 1 1 8 X:19176920-19176959 6 5 4805 FBgn0030990 550.2733333 27.66666667 42.21666667 0.009086393 0.180722892 0.118436636 -2 4 1 0.1 dme-miR-14-3p 6mer3-8 AAGACT X 19177182 19177187 - X_19177182_19177187_- 0.960306687 0.954740112 0.957523399 0.003936181 CG7556 FBtr0074697|FBtr0343313 19176995|19176107 19177281|19177281 X - 19176997 19177204 3'utr CG7556 FlyBase G68881.1 TTTTATACTTTGCATTAAAGACTCTCTGGCATAGCATTTTGGACCTTGCCAATCCTAATCCGCGGCCCGATCCTCTGCCCCTTCCCTGACCTTCTGTTTCCATCACCGTGTGTAGCGCTTATCTTATGTTTTGTACATAATTCTATATTGTAAACATCTAAATGTCGATTAATTCCTTTGCTAAGTAAACGAAATGTAAGAGGAAGTG 139 19177179 0.922892446 35 131 949 0.937888199 2.178976947 0.167701863 0.143884892 0.260869565 139 10 0 151 X:19176997-19177204 6 CG7556 FBtr0074697|FBtr0343313 19176995|19176107 19177281|19177281 AAGACT 6mer3-8 dme-miR-14-3p X - 19177112 19177200 3'utr CG7556 FlyBase G51809.2 ATACTTTGCATTAAAGACTCTCTGGCATAGCATTTTGGACCTTGCCAATCCTAATCCGCGGCCCGATCCTCTGCCCCTTCCCTGACCTT 66 19177179 0.789691898 15 56 404 0.842105263 1.124938737 0.115789474 0.333333333 0.536842105 66 10 5 80 X:19177112-19177200 6 64.5 4806 FBgn0030990 550.2733333 27.66666667 42.21666667 0.117214475 2.331325301 1.52783261 -8 -8 -8 0.1 dme-miR-995-5p 6mer3-8 AATTCG X 19181511 19181516 + X_19181511_19181516_+ 0.595994171 0.779438417 0.687716294 0.129714638 CG7453 FBtr0074666 19181192 19182024 X + 19181221 19181685 3'utr CG7453 FlyBase G62831.1 AAGGGCGGCCACTTCACCGGGTGCTCCAACGCCTCCTCCGGCGCACTCGGATGATTATTAGTTGTTTAAGTTATACACGACTGGACGTGCTTGCATTCAATGCAAGATCGCCGGATCGAAAGCAGAGTGAGAGTAGCGGAGAGCAGAGGAGGCGGTGGGAAAACGAAACGAAACTATGATATTGCTCAGTCAATTAGAGGAGGAGGAGAAAGGGATTCGCTTTGCAGCGTGGCTAGGATACCCTTCCGAGCGGCCAAATTGAATTTAAAGCCAACTGATTTTCAACACTAAATTCGAGTGGACTCTTAAGTTTAAGCATTTGGATTATTGTCAAGCATTTGTTAGCAATCAAAAATTGATACCGGCACTTATATGTACCCTATATATACATATATCTACTTAGGCTGCTGCTGTACATCGAAGGCTGCGGACTCTCAACCATCAACCATCAACATCAACATCAGC 372 19181519 0.977527574 68 357 2353 0.963218391 2.622214023 0.222988506 0.14516129 0.268965517 372 16 0 419 X:19181221-19181685 6 CG7453 FBtr0074666 19181192 19182024 AATTCG 6mer3-8 dme-miR-995-5p X + 19181225 19181670 3'utr CG7453 FlyBase G47396.1 GCGGCCACTTCACCGGGTGCTCCAACGCCTCCTCCGGCGCACTCGGATGATTATTAGTTGTTTAAGTTATACACGACTGGACGTGCTTGCATTCAATGCAAGATCGCCGGATCGAAAGCAGAGTGAGAGTAGCGGAGAGCAGAGGAGGCGGTGGGAAAACGAAACGAAACTATGATATTGCTCAGTCAATTAGAGGAGGAGGAGAAAGGGATTCGCTTTGCAGCGTGGCTAGGATACCCTTCCGAGCGGCCAAATTGAATTTAAAGCCAACTGATTTTCAACACTAAATTCGAGTGGACTCTTAAGTTTAAGCATTTGGATTATTGTCAAGCATTTGTTAGCAATCAAAAATTGATACCGGCACTTATATGTACCCTATATATACATATATCTACTTAGGCTGCTGCTGTACATCGAAGGCTGCGGACTCTCAACCATCAACCATC 247 19181519 0.978740321 64 228 1549 0.930294906 2.06320822 0.222520107 0.380566802 0.589812332 247 24 2 347 X:19181225-19181670 6 67.5 4807 FBgn0030991 1383.076667 90.74333333 138.8333333 0.048804236 0.743856298 0.486194478 -8 -8 -8 0.1 dme-miR-968-5p 7mer-A1 CTACTTA X 19181616 19181622 + X_19181616_19181622_+ 0.557712017 0.733857423 0.64578472 0.124553607 CG7453 FBtr0074666 19181192 19182024 X + 19181221 19181685 3'utr CG7453 FlyBase G62831.1 AAGGGCGGCCACTTCACCGGGTGCTCCAACGCCTCCTCCGGCGCACTCGGATGATTATTAGTTGTTTAAGTTATACACGACTGGACGTGCTTGCATTCAATGCAAGATCGCCGGATCGAAAGCAGAGTGAGAGTAGCGGAGAGCAGAGGAGGCGGTGGGAAAACGAAACGAAACTATGATATTGCTCAGTCAATTAGAGGAGGAGGAGAAAGGGATTCGCTTTGCAGCGTGGCTAGGATACCCTTCCGAGCGGCCAAATTGAATTTAAAGCCAACTGATTTTCAACACTAAATTCGAGTGGACTCTTAAGTTTAAGCATTTGGATTATTGTCAAGCATTTGTTAGCAATCAAAAATTGATACCGGCACTTATATGTACCCTATATATACATATATCTACTTAGGCTGCTGCTGTACATCGAAGGCTGCGGACTCTCAACCATCAACCATCAACATCAACATCAGC 372 19181619 0.977527574 68 357 2353 0.963218391 2.622214023 0.222988506 0.14516129 0.268965517 372 16 0 419 X:19181221-19181685 7 CG7453 FBtr0074666 19181192 19182024 CTACTTA 7mer-A1 dme-miR-968-5p X + 19181225 19181670 3'utr CG7453 FlyBase G47396.1 GCGGCCACTTCACCGGGTGCTCCAACGCCTCCTCCGGCGCACTCGGATGATTATTAGTTGTTTAAGTTATACACGACTGGACGTGCTTGCATTCAATGCAAGATCGCCGGATCGAAAGCAGAGTGAGAGTAGCGGAGAGCAGAGGAGGCGGTGGGAAAACGAAACGAAACTATGATATTGCTCAGTCAATTAGAGGAGGAGGAGAAAGGGATTCGCTTTGCAGCGTGGCTAGGATACCCTTCCGAGCGGCCAAATTGAATTTAAAGCCAACTGATTTTCAACACTAAATTCGAGTGGACTCTTAAGTTTAAGCATTTGGATTATTGTCAAGCATTTGTTAGCAATCAAAAATTGATACCGGCACTTATATGTACCCTATATATACATATATCTACTTAGGCTGCTGCTGTACATCGAAGGCTGCGGACTCTCAACCATCAACCATC 247 19181620 0.978740321 64 228 1549 0.930294906 2.06320822 0.222520107 0.380566802 0.589812332 247 24 2 347 X:19181225-19181670 7 37 4808 FBgn0030991 1383.076667 90.74333333 138.8333333 0.026751952 0.407743452 0.266506603 -3 -4 -3.5 0.1 dme-miR-277-3p 7mer-A1 GCATTTA X 19181804 19181810 + X_19181804_19181810_+ 0.823340762 0.533190288 0.678265525 0.205167386 CG7453 FBtr0074666 19181192 19182024 X + 19181706 19181846 3'utr CG7453 FlyBase G62832.1 GCATCCACAATCTAGCCGTAATGTGCCTTACGAACCAGCTCTATATACACCTTTACACATGATATTCTCCATCGCCGGGTCTTCGAGGTGATTTCTTCGCATTTACTTTACGCAACCAAGCAGCAGCACTCACTCAAAAAA 87 19181798 0.878989673 20 72 593 0.831858407 1.672097858 0.17699115 0.218390805 0.398230088 87 18 1 94 X:19181706-19181846 7 CG7453 FBtr0074666 19181192 19182024 GCATTTA 7mer-A1 dme-miR-277-3p X + 19181714 19181814 3'utr CG7453 FlyBase G47397.1 AATCTAGCCGTAATGTGCCTTACGAACCAGCTCTATATACACCTTTACACATGATATTCTCCATCGCCGGGTCTTCGAGGTGATTTCTTCGCATTTACTTT 26 19181798 0.948156797 13 25 194 0.975 1.290034611 0.225 0.384615385 0.6 26 0 1 39 X:19181714-19181814 7 6 4809 FBgn0030991 1383.076667 90.74333333 138.8333333 0.004338154 0.06612056 0.043217287 6 6 6 0.1 dme-miR-1006-3p 6mer2-7 GAATTT X 19195673 19195678 + X_19195673_19195678_+ 0.999999987 0.999996102 0.999998044 2.76E-06 CG14194 FBtr0074671|FBtr0336701 19195450|19195450 19196037|19196037 X + 19195652 19195723 3'utr CG14194 FlyBase G62849.1 CGTAGCTTTTAGACTTGTACTGAATTTTAATTGTAAGACAAACGCTAACACCGCCCACGAACCATGTCCAAC 30 19195668 0.99173232 11 25 263 0.828571429 0.985276743 0.085714286 0.1 0.228571429 30 4 2 29 X:19195652-19195723 6 CG14194 FBtr0336701|FBtr0074671 19195450|19195450 19196037|19196037 GAATTT 6mer2-7 dme-miR-1006-3p X + 19195649 19195693 3'utr CG14194 FlyBase G47405.1 CGTCGTAGCTTTTAGACTTGTACTGAATTTTAATTGTAAGACAAA 11 19195668 0.740565461 8 9 95 0.785714286 1.041392685 0.071428571 0.272727273 0.428571429 11 3 0 11 X:19195649-19195693 6 17 4810 FBgn0030996 477.9966667 30.26333333 46.23333333 0.035565102 0.561735874 0.367700072 5 5 5 0.1 dme-miR-79-3p 7mer-m8 TAGCTTT X 1920072 1920078 + X_1920072_1920078_+ 0.619540085 0.506062983 0.562801534 0.080240427 mip130 FBtr0070315 1919933 1920318 X + 1920016 1920097 3'utr mip130 FlyBase G58124.1 TCGTGAAAAGTTTTCAATAATACGCTGCAATAGGAAATTTAACAAAATAATCCGCATAGCTTTCTGACTGACTATCGTTTTT 16 1920077 0.899237691 7 14 119 1 1.255272505 0.222222222 0.125 0.222222222 16 0 0 18 X:1920016-1920097 7 mip130 FBtr0070315 1919933 1920318 TAGCTTT 7mer-m8 dme-miR-79-3p X + 1920069 1920095 3'utr mip130 FlyBase G43972.1 GCATAGCTTTCTGACTGACTATCGTTT 6 1920078 0.64624471 3 5 46 0.833333333 0.698970004 0 0 0 6 1 0 5 X:1920069-1920095 7 7 4811 FBgn0023509 646.0033333 22.50333333 34.39333333 0.010835857 0.311065027 0.203527815 -5 -6 -5.5 0.1 dme-miR-305-5p 6mer3-8 AGTACA X 19202190 19202195 - X_19202190_19202195_- 0.807357669 0.99979387 0.90357577 0.136072942 Ulp1 FBtr0074693 19202101 19202871 X - 19202191 19202224 3'utr Ulp1 FlyBase G68891.1 GTAAAGATTTTCTCTAACCCTTAGGAAGTAGTAC 12 19202212 0.680243243 3 10 92 0.875 1.146128036 0.0625 0.25 0.4375 12 2 0 14 X:19202191-19202224 4 Ulp1 FBtr0074693 19202101 19202871 AGTACA 6mer3-8 dme-miR-305-5p X - 19202187 19202221 3'utr Ulp1 FlyBase G51815.1 AAGATTTTCTCTAACCCTTAGGAAGTAGTACACCT 5 19202216 0.73467123 4 5 38 1 0.903089987 0.375 0.6 0.75 5 0 0 8 X:19202187-19202221 6 3 4812 FBgn0027603 2154.723333 47.38666667 72.81666667 0.00139229 0.063308948 0.041199359 17 21 19 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA X 19202822 19202827 - X_19202822_19202827_- 1 0.998275923 0.999137962 0.001219123 Ulp1 FBtr0074693|FBtr0074693 19202101|19202101 19202871|19202871 X - 19202810 19202887 stop_codon Ulp1 FlyBase G68896.1 AAAGTTGTGGCAGTAGGGGTTCAAGCACAAAACTACGCAAAAATGGAGAATTCAGTTCTTTACTTATTTTTACAAATC 12 19202837 0.966966306 7 12 74 1 1.113943352 0.076923077 0.083333333 0.153846154 12 0 0 13 X:19202810-19202887 6 Ulp1 FBtr0074693|FBtr0074693 19202101|19202101 19202871|19202871 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" X - 19202811 19202875 stop_codon Ulp1 FlyBase G51822.1 GTAGGGGTTCAAGCACAAAACTACGCAAAAATGGAGAATTCAGTTCTTTACTTATTTTTACAAAT 10 19202837 0.969586443 6 9 61 1 1.113943352 0.153846154 0.3 0.461538462 10 0 0 13 X:19202811-19202875 6 5.5 4813 FBgn0027603 2154.723333 47.38666667 72.81666667 0.002552532 0.116066404 0.075532158 10 10 10 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 19245030 19245036 + X_19245030_19245036_+ 0.823348877 0.823340843 0.82334486 5.73E-06 CG7889 FBtr0074675 19244824 19245224 X + 19245016 19245051 3'utr CG7889 FlyBase G62859.1 TTTGTATCTAATTTCCAAAGAATTTGACTTAAGCAG 16 19245028 0.782570765 3 16 133 1 1.230448921 0.235294118 0.0625 0.117647059 16 0 0 17 X:19245016-19245051 7 CG7889 FBtr0074675 19244824 19245224 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X + 19245015 19245052 3'utr CG7889 FlyBase G47411.1 TTTTGTATCTAATTTCCAAAGAATTTGACTTAAGCAGT 11 19245028 0.781801197 3 11 116 1 1.146128036 0.428571429 0.181818182 0.357142857 11 0 0 14 X:19245015-19245052 7 13.5 4814 FBgn0031003 189 15.83 24.33666667 0.071428571 0.852811118 0.554718532 2 2 2 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA X 19252280 19252287 - X_19252280_19252287_- 0.500117287 0.500119594 0.500118441 1.63E-06 rictor FBtr0074689|FBtr0343634|FBtr0343635 19252109|19252109|19252109 19252721|19252721|19252721 X - 19252263 19252312 3'utr rictor FlyBase G68918.1 AACCACCGCAATTTATTTAATTAATGTACTTAAAACTAAAAGAGACCCAG 42 19252288 0.978746993 2 41 298 0.980392157 1.397940009 0 0.19047619 0.333333333 42 0 1 50 X:19252263-19252312 8 rictor FBtr0343634|FBtr0343635|FBtr0074689 19252109|19252109|19252109 19252721|19252721|19252721 GTACTTAA 8mer-A1 dme-miR-252-5p X - 19252273 19252300 3'utr rictor FlyBase G51841.1 TTATTTAATTAATGTACTTAAAACTAAA 22 19252288 0.731338914 2 22 170 1 1.51851394 0 0.409090909 0.606060606 22 0 0 33 X:19252273-19252300 8 32 4815 FBgn0031006 604.1266667 11.03 16.89666667 0.052969024 2.901178604 1.893864668 1 1 1 0.1 dme-miR-34-5p 7mer-m8 CACTGCC X 19252673 19252679 - X_19252673_19252679_- 0.708953205 0.708953382 0.708953294 1.41E-07 rictor FBtr0074689|FBtr0343634|FBtr0343635 19252109|19252109|19252109 19252721|19252721|19252721 X - 19252639 19252730 stop_codon rictor FlyBase G68921.1 AACTCCTAGACGCACTGGCGGAAGATCAATTGAAGTAGCCCAATGGGGACGCACTGCCTACTCTTACATCTCGTTTACTGGCCGCCCGCCTT 16 19252672 0.95481563 8 15 76 0.947368421 1.255272505 0.105263158 0.1875 0.315789474 16 1 0 18 X:19252639-19252730 7 rictor FBtr0343634|FBtr0343635|FBtr0074689 19252109|19252109|19252109 19252721|19252721|19252721 CACTGCC 7mer-m8 dme-miR-34-5p X - 19252636 19252688 3'utr rictor FlyBase G51844.1 ATGGGGACGCACTGCCTACTCTTACATCTCGTTTACTGGCCGCCCGCCTTCCT 7 19252670 0.966802684 7 7 36 1 0.84509804 0 0 0 7 0 0 7 X:19252636-19252688 7 6 4816 FBgn0031006 604.1266667 11.03 16.89666667 0.009931692 0.543970988 0.355099625 -7 -9 -8 0.1 dme-miR-980-3p 7mer-A1 GCAGCTA X 19271799 19271805 + X_19271799_19271805_+ 0.823339722 0.823341948 0.823340835 1.56E-06 Vav FBtr0074678|FBtr0333759|FBtr0113316|FBtr0074677 19271577|19271577|19271577|19271577 19273280|19272089|19272089|19272089 X + 19271770 19271830 3'utr Vav FlyBase G62875.1 CGATGTCGCCAGTCACAGCAACAACAATTGCAGCTAGATCGTAGCCTAGTTAAATGTATAC 213 19271797 0.827167595 5 209 843 0.98015873 2.392696953 0.130952381 0.145539906 0.277777778 213 5 0 247 X:19271770-19271830 7 Vav FBtr0113316|FBtr0074677|FBtr0074678|FBtr0333759 19271577|19271577|19271577|19271577 19272089|19272089|19273280|19272089 GCAGCTA 7mer-A1 dme-miR-980-3p X + 19271759 19271825 3'utr Vav FlyBase G47422.1 GAGGCCGTGGCCGATGTCGCCAGTCACAGCAACAACAATTGCAGCTAGATCGTAGCCTAGTTAAATG 138 19271797 0.932630892 3 135 504 0.982758621 2.357934847 0.163793103 0.463768116 0.681034483 138 4 0 228 X:19271759-19271825 7 174.5 4817 FBgn0040068 329.8133333 9.073333333 13.89 0.52908716 19.23218222 12.56299496 2 2 2 0.1 dme-miR-263a-5p 6mer3-8 GTGCCA X 19271941 19271946 + X_19271941_19271946_+ 0.978266346 0.972968795 0.97561757 0.003745898 Vav FBtr0074678|FBtr0333759|FBtr0113316|FBtr0074677 19271577|19271577|19271577|19271577 19273280|19272089|19272089|19272089 X + 19271916 19271963 3'utr Vav FlyBase G62876.1 TTTGCGTCGTCTGCTCGAAACATTTGTGCCAATCACCGGAAAATTACA 6 19271939 0.957373768 5 6 33 1 0.954242509 0 0.5 0.666666667 6 0 0 9 X:19271916-19271963 6 Vav FBtr0113316|FBtr0074677|FBtr0074678|FBtr0333759 19271577|19271577|19271577|19271577 19272089|19272089|19273280|19272089 GTGCCA 6mer3-8 dme-miR-263a-5p X + 19271918 19271960 3'utr Vav FlyBase G47423.1 TGCGTCGTCTGCTCGAAACATTTGTGCCAATCACCGGAAAATT 5 19271948 0.956761419 3 5 30 1 0.84509804 0 0.2 0.428571429 5 0 0 7 X:19271918-19271960 6 5.5 4818 FBgn0040068 329.8133333 9.073333333 13.89 0.0166761 0.606171932 0.395968323 2 -7 -2.5 0.1 dme-miR-968-5p 6mer3-8 ACTACT X 1927210 1927215 + X_1927210_1927215_+ 0.984613079 0.991457755 0.988035417 0.004839934 Ocrl FBtr0070317|FBtr0332586 1927165|1927165 1927524|1927524 X + 1927174 1927230 3'utr Ocrl FlyBase G58135.1 AGCTGTGCCGCCGAATCGGAAGCGAGCGATAGATGTACTACTCTGTTGATAGTTACG 214 1927207 0.963160867 5 213 1448 0.996015936 2.397940009 0.3187251 0.135514019 0.262948207 214 1 0 250 X:1927174-1927230 6 Ocrl FBtr0070317|FBtr0332586 1927165|1927165 1927524|1927524 ACTACT 6mer3-8 dme-miR-968-5p X + 1927181 1927232 3'utr Ocrl FlyBase G43977.1 CCGCCGAATCGGAAGCGAGCGATAGATGTACTACTCTGTTGATAGTTACGCA 153 1927207 0.810788619 5 151 970 0.996047431 2.100370545 0.343873518 0.490196078 0.691699605 153 0 1 252 X:1927181-1927232 6 182.5 4819 FBgn0023508 754.4366667 24.83 38.10666667 0.241902347 7.349979863 4.789188244 3 3 3 0.1 dme-miR-252-5p 6mer3-8 GTACTT X 19272255 19272260 + X_19272255_19272260_+ 0.99997414 0.989692256 0.994833198 0.007270331 Vav FBtr0074678 19271577 19273280 X + 19272250 19272310 3'utr Vav FlyBase G62877.1 TTATTGTACTTGTACTGGTAGATATTTAACCCTAGTTGAAACGCAAATGTTAACATAACGA 10 19272259 0.995386593 6 7 95 0.538461538 0.84509804 0.076923077 0.1 0.307692308 10 6 0 7 X:19272250-19272310 6 Vav FBtr0074678 19271577 19273280 GTACTT 6mer3-8 dme-miR-252-5p X + 19272252 19272287 3'utr Vav FlyBase G47424.1 ATTGTACTTGTACTGGTAGATATTTAACCCTAGTTG 5 19272261 0.958274403 4 5 52 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 X:19272252-19272287 6 5.5 4820 FBgn0040068 329.8133333 9.073333333 13.89 0.0166761 0.606171932 0.395968323 -4 -6 -5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 19272508 19272513 + X_19272508_19272513_+ 0.999999998 0.99999163 0.999995814 5.94E-06 Vav FBtr0074678 19271577 19273280 X + 19272451 19272563 3'utr Vav FlyBase G62879.1 TATAGATATCTATACCTATAACTATAACTATACCTAATAACTATAACTAACTATAATGTACCTATTTATATAGCCAACGAATCACCTTGCGAACTTGATGGATGATGAGTCGA 14 19272507 0.982620591 8 14 105 1 1.204119983 0.125 0.142857143 0.25 14 0 0 16 X:19272451-19272563 6 Vav FBtr0074678 19271577 19273280 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X + 19272482 19272524 3'utr Vav FlyBase G47425.1 ACCTAATAACTATAACTAACTATAATGTACCTATTTATATAGC 5 19272507 0.984288311 2 5 51 1 0.698970004 0 0 0 5 0 0 5 X:19272482-19272524 6 6 4821 FBgn0040068 329.8133333 9.073333333 13.89 0.018192109 0.661278472 0.431965443 1 1 1 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT X 19273140 19273146 + X_19273140_19273146_+ 0.658999525 0.658999527 0.658999526 0 Vav FBtr0074678 19271577 19273280 X + 19273108 19273165 3'utr Vav FlyBase G62880.1 CGCTCGCCTGCTGTCCCTTTCCCTTTCGCATCGGCAGCTCCAAAATTATTGTTAAGTA 15 19273138 0.892096526 5 14 132 0.933333333 1.146128036 0 0 0 15 1 0 14 X:19273108-19273165 7 Vav FBtr0074678 19271577 19273280 GGCAGCT 7mer-m8 dme-miR-980-3p X + 19273117 19273164 3'utr Vav FlyBase G47426.1 GCTGTCCCTTTCCCTTTCGCATCGGCAGCTCCAAAATTATTGTTAAGT 13 19273137 0.795250234 8 12 102 0.952380952 1.301029996 0 0.307692308 0.571428571 13 1 0 20 X:19273117-19273164 7 12.5 4822 FBgn0040068 329.8133333 9.073333333 13.89 0.037900226 1.377663483 0.899928006 2 3 2.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 19281978 19281983 - X_19281978_19281983_- 0.99968165 0.999693418 0.999687534 8.34E-06 CG8034 FBtr0074684 19281230 19282726 X - 19281954 19282081 3'utr CG8034 FlyBase G68977.1 AATCACTACTTATAGAAATACTGATATCTGCATCTGAAGATACATCGATGTGACAGGAAGATGAGGAAGGAGTGTTGAAAATTGATCGGCTTTAAAATGTACCTAAGGAGCGAAGTTAAGCAGCGACA 615 19281984 0.833484641 21 601 3561 0.981767181 2.544068044 0.227208976 0.133333333 0.252454418 615 12 1 700 X:19281954-19282081 6 CG8034 FBtr0074684 19281230 19282726 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X - 19281941 19282077 3'utr CG8034 FlyBase G51880.1 ACTACTTATAGAAATACTGATATCTGCATCTGAAGATACATCGATGTGACAGGAAGATGAGGAAGGAGTGTTGAAAATTGATCGGCTTTAAAATGTACCTAAGGAGCGAAGTTAAGCAGCGACAAAACAATTAAACT 363 19281984 0.980909013 18 350 2028 0.965048544 2.219235134 0.203883495 0.339779006 0.53592233 362 16 2 497 X:19281941-19282077 6 437.5 4823 FBgn0031011 3073.103333 84.54333333 130.1433333 0.142364233 5.174861018 3.36167815 1 1 1 0.1 dme-miR-1006-3p 6mer3-8 CGAATT X 19301540 19301545 - X_19301540_19301545_- 0.99929766 0.992677118 0.995987389 0.004681471 CG8051 FBtr0074683|FBtr0343320 19301328|19301328 19301580|19301580 X - 19301498 19301563 3'utr CG8051 FlyBase G68997.1 AGTTTTACTCAGTGCCAGCGAATTCCAGGACCAACACCGTTCCCCCATCCATCCTAACTTTAGCAA 40 19301541 0.783721069 7 32 156 0.860465116 1.091080469 0.11627907 0.075 0.139534884 40 4 2 37 X:19301498-19301563 6 CG8051 FBtr0074683|FBtr0343320 19301328|19301328 19301580|19301580 CGAATT 6mer3-8 dme-miR-1006-3p X - 19301506 19301553 3'utr CG8051 FlyBase G51891.1 AGTGCCAGCGAATTCCAGGACCAACACCGTTCCCCCATCCATCCTAAC 15 19301541 0.800323328 3 13 41 0.96 1.380211242 0.28 0.6 0.76 15 1 0 24 X:19301506-19301553 6 13.5 4824 FBgn0031012 506.02 23.91 36.60666667 0.026678787 0.564617315 0.368785285 -4 -4 -4 0.1 dme-miR-14-3p 7mer-A1 AGACTGA X 19485920 19485926 - X_19485920_19485926_- 0.82333944 0.823330466 0.823334953 6.29E-06 pcm FBtr0302082|FBtr0074784 19485757|19485878 19486102|19486102 X - 19485901 19485952 3'utr pcm FlyBase G69024.1 TTGCGGATTATGTGAATACTAAAATGAGACTGACTCGTCTTTATATTTTTTC 220 19485928 0.932390553 8 214 1370 0.98467433 2.409933123 0.340996169 0.154545455 0.287356322 220 4 0 257 X:19485901-19485952 7 pcm FBtr0302082|FBtr0074784 19485757|19485878 19486102|19486102 AGACTGA 7mer-A1 dme-miR-14-3p X - 19485880 19485960 3'utr pcm FlyBase G51910.1 TTTTAGAGTTGCGGATTATGTGAATACTAAAATGAGACTGACTCGTCTTTATATTTTTTCAATAAACTGGACTTTACCCAT 122 19485928 0.922353502 11 118 715 0.963190184 2.195899652 0.306748466 0.303278689 0.478527607 122 6 0 157 X:19485880-19485960 7 154.5 4825 FBgn0020261 395.3566667 9.006666667 13.76666667 0.390786379 17.15396003 11.22276029 2 2 2 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC X 19486004 19486009 - X_19486004_19486009_- 0.932761085 0.944731818 0.938746451 0.008464563 pcm FBtr0302082|FBtr0074784 19485757|19485878 19486102|19486102 X - 19485969 19486086 3'utr pcm FlyBase G69025.1 ATTTTTAGGTTCAAATCCCACCTAGCTGAAGAAATGCAACGCTATTTGGATCTTATATCACCTTATTTCTATCTCTCCTAGTCTGTGCGAGGCACTAGAATTGCCGCACACGATAGAT 55 19486003 0.910986667 10 52 401 0.939393939 1.491361694 0.060606061 0.145454545 0.287878788 55 3 1 62 X:19485969-19486086 6 pcm FBtr0302082|FBtr0074784 19485757|19485878 19486102|19486102 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" X - 19485978 19486027 3'utr pcm FlyBase G51911.1 ACCTTATTTCTATCTCTCCTAGTCTGTGCGAGGCACTAGAATTGCCGCAC 32 19486003 0.971965484 6 31 250 1 1.681241237 0 0.40625 0.604166667 32 0 0 48 X:19485978-19486027 6 37 4826 FBgn0020261 395.3566667 9.006666667 13.76666667 0.093586382 4.108068098 2.687651332 -6 -6 -6 0.1 dme-miR-980-3p 6mer3-8 GGCAGC X 19493374 19493379 - X_19493374_19493379_- 0.99999942 0.999998996 0.999999208 2.83E-07 CG12204 FBtr0074783 19493290 19493407 X - 19493341 19493393 3'utr CG12204 FlyBase G69031.1 GTGCCGCTTCCATTGGCAGCGAAACTGGTGGCCATTACATGGTGCTGTGGTCA 7 19493380 0.967141724 4 7 42 1 0.954242509 0.666666667 0.285714286 0.444444444 7 0 0 9 X:19493341-19493393 6 CG12204 FBtr0074783 19493290 19493407 GGCAGC 6mer3-8 dme-miR-980-3p X - 19493357 19493401 3'utr CG12204 FlyBase G51915.2 ATGTGATGGTGCCGCTTCCATTGGCAGCGAAACTGGTGGCCATTA 8 19493381 0.810611491 2 7 39 0.9375 0.875061263 0.5625 0.375 0.6875 8 0 1 15 X:19493357-19493401 6 6 4827 FBgn0031022 64 7.23 11.12666667 0.09375 0.829875519 0.539245057 1 2 1.5 0.1 dme-miR-308-3p 7mer-m1 TGTGATT X 19508833 19508839 + X_19508833_19508839_+ 0.52122377 0.521222379 0.521223074 9.90E-07 Pfrx FBtr0074713|FBtr0074717|FBtr0074715|FBtr0307193|FBtr0074716|FBtr0074714|FBtr0074720|FBtr0307194|FBtr0339439|FBtr0339440|FBtr0074718|FBtr0307192|FBtr0074719 19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526 19509350|19509350|19509350|19509350|19508902|19509350|19509350|19509350|19509350|19509350|19509350|19509350|19509350 X + 19508723 19508869 3'utr Pfrx FlyBase G62900.1 AGACACGGACGTGGTCATGCGAGGGCAACACTGACAACTGCTCCTGCACCTGCTCCAAGGATGTGGTGGCATCTCTACTTAACGTGGCGTCGAAGGACTGCGTATGAAATTGTGATTGATCCATTGTGCTGTTTTATTATGTACTTT 182 19508832 0.988207279 16 177 1612 0.964912281 1.643452676 0.057017544 0.203296703 0.364035088 182 4 4 220 X:19508723-19508869 7 Pfrx FBtr0074714|FBtr0074716|FBtr0074719|FBtr0339440|FBtr0307194|FBtr0074718|FBtr0339439|FBtr0307192|FBtr0074720|FBtr0074713|FBtr0074717|FBtr0074715|FBtr0307193 19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526 19509350|19508902|19509350|19509350|19509350|19509350|19509350|19509350|19509350|19509350|19509350|19509350|19509350 TGTGATT 7mer-m1 dme-miR-308-3p X + 19508773 19508873 3'utr Pfrx FlyBase G47437.1 TGCTCCAAGGATGTGGTGGCATCTCTACTTAACGTGGCGTCGAAGGACTGCGTATGAAATTGTGATTGATCCATTGTGCTGTTTTATTATGTACTTTAATG 122 19508832 0.965571548 18 117 1095 0.957894737 1.561101384 0.068421053 0.409836066 0.621052632 122 4 4 182 X:19508773-19508873 7 125.5 4828 FBgn0027621 67 2.486666667 3.756666667 1.873134328 50.4691689 33.40727595 1 1 1 0.1 dme-miR-33-5p 7mer-A1 AATGCAA X 19518469 19518475 - X_19518469_19518475_- 0.778976718 0.752575357 0.765776037 0.018668538 l(1)G0156 FBtr0307904 19518426 19519286 X - 19518436 19518516 3'utr l(1)G0156 FlyBase G69036.1 ATGAAATGAAGGCAATTGTTATTAATAGTTAAGCGAATTGTAATGCAAAGTCATCATGCAATTGTTAAAACTCAATAAAGG 30 19518478 0.98233379 8 29 221 0.914285714 1.505149978 0.057142857 0.133333333 0.257142857 30 3 0 32 X:19518436-19518516 7 l(1)G0156 FBtr0307904 19518426 19519286 AATGCAA 7mer-A1 dme-miR-33-5p X - 19518453 19518527 3'utr l(1)G0156 FlyBase G51919.1 ATACAAATGCTATGAAATGAAGGCAATTGTTATTAATAGTTAAGCGAATTGTAATGCAAAGTCATCATGCAATTG 17 19518478 0.986283148 6 15 130 0.956521739 1.342422681 0.173913043 0.294117647 0.47826087 17 1 0 22 X:19518453-19518527 7 19.5 4829 FBgn0027291 1766.01 106.06 162.5666667 0.01104184 0.183858193 0.119950789 3 3 3 0.1 dme-miR-304-5p 6mer2-7 GAGATT X 19524416 19524421 + X_19524416_19524421_+ 0.99915762 0.985022558 0.992090089 0.009994954 CoRest FBtr0336667 19524177 19524813 X + 19524405 19524452 3'utr CoRest FlyBase G62924.1 CGCATCACAAAGAGATTGTAGACTACATTTATTAGGGCTAGTATAACG 6 19524423 0.983760677 3 6 50 1 0.84509804 0.428571429 0.166666667 0.285714286 6 0 0 7 X:19524405-19524452 6 CoRest FBtr0336667 19524177 19524813 GAGATT 6mer2-7 dme-miR-304-5p X + 19524405 19524435 3'utr CoRest FlyBase G47458.1 CGCATCACAAAGAGATTGTAGACTACATTTA 7 19524421 0.735891592 3 7 40 1 1.041392685 0 0.428571429 0.636363636 7 0 0 11 X:19524405-19524435 6 6 4830 FBgn0261573 1764.736667 66.82333333 102.5833333 0.003399941 0.089788996 0.058489033 -7 -5 -6 0.1 dme-miR-304-5p 7mer-A1 GAGATTA X 19529975 19529981 + X_19529975_19529981_+ 0.823349562 0.823349558 0.82334956 0 CoRest FBtr0302864|FBtr0307903|FBtr0302862|FBtr0302863 19529756|19529756|19529756|19529756 19530896|19530896|19530896|19530896 X + 19529941 19530015 3'utr CoRest FlyBase G62931.1 AAAAGAAAGCATCACGGCTTTATCTAGGCTTGTAGAGATTAGTTCGTTTGTATTTGAGGTAACCTTGAGACAGTT 14 19529971 0.987418659 7 14 123 1 1.204119983 0.1875 0.142857143 0.25 14 0 0 16 X:19529941-19530015 7 CoRest FBtr0302862|FBtr0302863|FBtr0302864|FBtr0307903 19529756|19529756|19529756|19529756 19530896|19530896|19530896|19530896 GAGATTA 7mer-A1 dme-miR-304-5p X + 19529900 19530016 3'utr CoRest FlyBase G47462.1 TTCTCTTAATTGTCTTTAAACTTGGGACGCATTTATCGTAAAAAAGAAAGCATCACGGCTTTATCTAGGCTTGTAGAGATTAGTTCGTTTGTATTTGAGGTAACCTTGAGACAGTTC 21 19529971 0.986639322 12 20 173 0.941176471 1.505149978 0.117647059 0.428571429 0.647058824 21 2 0 32 X:19529900-19530016 7 10 4831 FBgn0261573 1764.736667 66.82333333 102.5833333 0.005666568 0.149648326 0.097481722 4 4 4 0.1 dme-miR-318-3p 6mer2-7 CCAGTG X 19561263 19561268 - X_19561263_19561268_- 0.993602109 0.993993535 0.993797822 0.000276762 Grip84 FBtr0343590 19559429 19561576 X - 19561250 19561272 3'utr Grip84 FlyBase G69050.1 TAAGCCAGTGGCGTAGATTGCAG 156 19561264 0.915576815 4 154 625 0.986547085 2.342422681 0 0.307692308 0.515695067 156 3 0 220 X:19561250-19561272 6 Grip84 FBtr0343590 19559429 19561576 CCAGTG 6mer2-7 dme-miR-318-3p X - 19561251 19561272 3'utr Grip84 FlyBase G51929.1 TAAGCCAGTGGCGTAGATTGCA 111 19561264 0.902518473 4 106 448 0.967948718 1.701855693 0 0.324324324 0.519230769 111 3 2 151 X:19561251-19561272 6 133.5 4832 FBgn0026430 457.6666667 17.04666667 26.22666667 0.291697014 7.831443097 5.090238943 -4 -4 -4 0.1 dme-miR-33-5p 7mer-A1 AATGCAA X 19570430 19570436 - X_19570430_19570436_- 0.774005449 0.78289122 0.778448335 0.006283209 Tao FBtr0303999 19569719 19571580 X - 19570403 19570482 3'utr Tao FlyBase G69056.1 ATATATATATACATAAAACTAAAGTAAGCCTATTTTAGAGTTAATTAATGCAAATTGCAAAATGCTTAGTCAAAACAATA 16 19570419 0.796402031 7 15 101 1 1.204119983 0 0.066666667 0.125 15 0 0 16 X:19570403-19570482 7 Tao FBtr0303999 19569719 19571580 AATGCAA 7mer-A1 dme-miR-33-5p X - 19570388 19570431 3'utr Tao FlyBase G51933.1 AAATTGCAAAATGCTTAGTCAAAACAATAAAAATTGTATAGAAA 9 19570419 0.970550671 5 7 41 1 1.041392685 0.181818182 0.222222222 0.363636364 9 0 0 11 X:19570388-19570431 2 5 4833 FBgn0031030 4262.23 160.5366667 246.0233333 0.001173095 0.031145533 0.020323276 -17 -17 -17 0.1 dme-miR-283-5p 8mer-A1 TGATATTA X 19570999 19571006 - X_19570999_19571006_- 0.592192147 0.592192291 0.592192219 1.41E-07 Tao FBtr0304000|FBtr0303999 19570645|19569719 19571580|19571580 X - 19570967 19571018 5'utr Tao FlyBase G69059.1 TAAAGTCTAATTTGATATTATTACCGGATAACTGAATCAATCACACAATTTT 8 19571007 0.995075438 3 6 73 0.8 0.903089987 0.4 0.25 0.4 8 2 0 8 X:19570967-19571018 8 Tao FBtr0304000|FBtr0303999 19570645|19569719 19571580|19571580 TGATATTA 8mer-A1 dme-miR-283-5p X - 19570974 19571030 5'utr Tao FlyBase G51935.1 AAGTGTTTAAATTAAAGTCTAATTTGATATTATTACCGGATAACTGAATCAATCACA 8 19571007 0.983233516 4 7 72 1 1.146128036 0.142857143 0.625 0.785714286 8 0 0 14 X:19570974-19571030 8 6.5 4834 FBgn0031030 4262.23 160.5366667 246.0233333 0.001525023 0.040489193 0.026420258 1 1 1 0.1 dme-miR-968-5p 6mer3-8 ACTACT X 19611095 19611100 + X_19611095_19611100_+ 0.999909806 0.995460051 0.997684929 0.003146413 CG14207 FBtr0074734|FBtr0074733|FBtr0345918|FBtr0307161 19610889|19610889|19610889|19610889 19611273|19611273|19611413|19611153 X + 19611029 19611114 3'utr CG14207 FlyBase G62960.1 ATCCAATCCTATCTAAATGATTAATTTTTTTGGTTCTGACTTAAAGCTAAACTATGTTACTGACGTACTACTCATTAACTTAAATA 26 19611103 0.98949862 11 24 231 0.96875 1.491361694 0.03125 0.192307692 0.34375 26 1 0 31 X:19611029-19611114 6 CG14207 FBtr0307161|FBtr0345918|FBtr0074733|FBtr0074734 19610889|19610889|19610889|19610889 19611153|19611413|19611273|19611273 ACTACT 6mer3-8 dme-miR-968-5p X + 19611051 19611117 3'utr CG14207 FlyBase G47489.1 AATTTTTTTGGTTCTGACTTAAAGCTAAACTATGTTACTGACGTACTACTCATTAACTTAAATATAA 23 19611103 0.705016255 11 22 201 0.9375 1.477121255 0.125 0.347826087 0.53125 23 2 0 30 X:19611051-19611117 6 11 4835 FBgn0031037 798 79.94333333 122.5933333 0.013784461 0.137597465 0.089727555 -8 -8 -8 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG X 19615481 19615486 + X_19615481_19615486_+ 1 0.999999988 0.999999994 0 Shawn FBtr0074739|FBtr0344069|FBtr0074738|FBtr0074737 19615415|19615415|19615415|19615415 19615617|19615617|19615596|19615617 X + 19615419 19615512 3'utr Shawn FlyBase G62963.1 GCGCTCCCAATGCGGTGACCACAGCATGTCGACGTGAATCTTTGTACATATGTAGATTAATGCCAAAGTTGCCAGGAAATCGGTGGGCAGGTGG 18 19615479 0.969877113 6 16 96 0.947368421 1.255272505 0.473684211 0.055555556 0.105263158 18 1 0 18 X:19615419-19615512 6 Shawn FBtr0074737|FBtr0074738|FBtr0344069|FBtr0074739 19615415|19615415|19615415|19615415 19615617|19615596|19615617|19615617 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" X + 19615462 19615501 3'utr Shawn FlyBase G47491.1 GTACATATGTAGATTAATGCCAAAGTTGCCAGGAAATCGG 11 19615479 0.721593854 5 9 59 0.866666667 1.113943352 0.466666667 0.363636364 0.533333333 11 2 0 13 X:19615462-19615501 6 12.5 4836 FBgn0031039 175.68 13.25333333 20.26333333 0.071152095 0.943158954 0.616877776 2 2 2 0.1 dme-miR-2535b-3p 6mer3-8 CCGTGA X 19622029 19622034 - X_19622029_19622034_- 0.693869485 0.944203315 0.8190364 0.177012728 NAA20 FBtr0332483|FBtr0332484|FBtr0074763 19621449|19621449|19621449 19622172|19622172|19622172 X - 19622011 19622047 5'utr NAA20 FlyBase G69082.1 ATAACCCATAATCCCGTGATCTGCCCGGTGATAACAT 32 19622027 0.718237669 4 32 165 1 1.579783597 0 0.125 0.263157895 32 0 0 38 X:19622011-19622047 6 NAA20 FBtr0074763|FBtr0332484|FBtr0332483 19621449|19621449|19621449 19622172|19622172|19622172 CCGTGA 6mer3-8 dme-miR-2535b-3p X - 19622012 19622047 5'utr NAA20 FlyBase G51951.1 ATAACCCATAATCCCGTGATCTGCCCGGTGATAACA 21 19622026 0.765807665 4 20 93 1 1.556302501 0 0.523809524 0.722222222 21 0 0 36 X:19622012-19622047 6 25.5 4837 FBgn0031043 449.0266667 46.18333333 70.71 0.0567895 0.552147239 0.360627917 -7 -8 -7.5 0.1 dme-miR-282-5p 6mer2-7 GAGGCT X 19624741 19624746 + X_19624741_19624746_+ 0.999876272 0.99999999 0.999938131 8.75E-05 MKP-4 FBtr0332481|FBtr0074741 19624630|19624630 19625199|19625729 X + 19624662 19624768 3'utr MKP-4 FlyBase G62969.1 CATCATCAGAGACGGGACAATTGGACTCCCTTGTCGGCTGGCAAAGAACGGCAATCGCCCACCTAAACAAAAAGCAATGGAGGCTTGGATTGATTGATCAGTGCTTA 56 19624739 0.968725741 9 54 238 0.956521739 1.819543936 0.304347826 0.178571429 0.333333333 56 3 0 66 X:19624662-19624768 6 MKP-4 FBtr0074741|FBtr0332481 19624630|19624630 19625729|19625199 GAGGCT 6mer2-7 dme-miR-282-5p X + 19624722 19624778 3'utr MKP-4 FlyBase G47498.1 ACCTAAACAAAAAGCAATGGAGGCTTGGATTGATTGATCAGTGCTTATCAGTGCTGG 20 19624739 0.968289595 6 19 102 0.911764706 1.491361694 0.264705882 0.5 0.705882353 20 3 0 31 X:19624722-19624778 6 30 4838 FBgn0031044 267.6933333 13.86333333 21.32666667 0.112068536 2.163981726 1.40668959 2 2 2 0.1 dme-miR-304-5p 7mer-m8 TGAGATT X 19624917 19624923 + X_19624917_19624923_+ 0.618355983 0.620187406 0.619271694 0.001294995 MKP-4 FBtr0332481|FBtr0074741 19624630|19624630 19625199|19625729 X + 19624894 19624932 3'utr MKP-4 FlyBase G62970.1 GCTGAATAGCTCCTCCACCAAGCTGAGATTTTTGAAACG 30 19624924 0.62401992 7 27 227 0.878787879 1.161368002 0.393939394 0.1 0.181818182 30 3 1 29 X:19624894-19624932 7 MKP-4 FBtr0074741|FBtr0332481 19624630|19624630 19625729|19625199 TGAGATT 7mer-m8 dme-miR-304-5p X + 19624884 19624933 3'utr MKP-4 FlyBase G47499.1 TGGTCCCATTGCTGAATAGCTCCTCCACCAAGCTGAGATTTTTGAAACGC 18 19624923 0.987950716 6 14 130 0.846153846 1.041392685 0.269230769 0.222222222 0.461538462 18 3 1 22 X:19624884-19624933 7 23.5 4839 FBgn0031044 267.6933333 13.86333333 21.32666667 0.08778702 1.695119019 1.101906846 -7 -6 -6.5 0.1 dme-bantam-3p 6mer3-8 TGATCT X 19625328 19625333 + X_19625328_19625333_+ 0.999963456 0.999937753 0.999950605 1.82E-05 MKP-4 FBtr0074741 19624630 19625729 X + 19625273 19625361 3'utr MKP-4 FlyBase G62972.1 TGTACGTGCGATATAGTGCACCCATATTTGTTGGAAGCCATACAAGTATGTATATTGATCTTTGCTGTTCCATATGCATTTGCATAGCT 19 19625327 0.992817071 9 17 194 0.84 1.322219295 0.16 0.210526316 0.4 19 4 0 21 X:19625273-19625361 6 MKP-4 FBtr0074741 19624630 19625729 TGATCT 6mer3-8 dme-bantam-3p X + 19625311 19625344 3'utr MKP-4 FlyBase G47502.1 CATACAAGTATGTATATTGATCTTTGCTGTTCCA 8 19625335 0.68337805 3 7 77 0.916666667 1.041392685 0.583333333 0.5 0.666666667 8 1 0 11 X:19625311-19625344 6 11.5 4840 FBgn0031044 267.6933333 13.86333333 21.32666667 0.042959606 0.829526328 0.53923101 1 -7 -3 0.1 dme-miR-283-5p 7mer-m1 GATATTT X 19625414 19625420 + X_19625414_19625420_+ 0.765586627 0.765583583 0.765585105 2.12E-06 MKP-4 FBtr0074741 19624630 19625729 X + 19625390 19625428 3'utr MKP-4 FlyBase G62973.1 CACACAAACTATGAATGTATTTTAGATATTTAAACCTTT 9 19625411 0.83348416 5 8 89 1 1 0 0.111111111 0.2 9 0 0 10 X:19625390-19625428 7 MKP-4 FBtr0074741 19624630 19625729 GATATTT 7mer-m1 dme-miR-283-5p X + 19625389 19625418 3'utr MKP-4 FlyBase G47503.1 ACACACAAACTATGAATGTATTTTAGATAT 5 19625411 0.893212536 2 5 41 1 1 0.1 0.8 0.9 5 0 0 10 X:19625389-19625418 5 6.5 4841 FBgn0031044 267.6933333 13.86333333 21.32666667 0.024281516 0.468862707 0.304782745 3 3 3 0.1 dme-miR-970-3p 7mer-m8 TCTTATG X 19626599 19626605 - X_19626599_19626605_- 0.658997844 0.653153134 0.656075489 0.004132827 e(y)3 FBtr0334278 19626546 19628098 X - 19626560 19626617 3'utr e(y)3 FlyBase G69087.1 AAGTGGAATTATTCTTATGTATACATACTGAAAGATTTATTTTTAAGTCGAATAAAAC 20 19626606 0.849427319 6 19 185 1 1.477121255 0.033333333 0.25 0.5 20 0 0 30 X:19626560-19626617 7 e(y)3 FBtr0334278 19626546 19628098 TCTTATG 7mer-m8 dme-miR-970-3p X - 19626566 19626653 3'utr e(y)3 FlyBase G51954.1 CTTTATGCGAAAAGTAAATCTTAAGTCCTTCATATTAAGTGGAATTATTCTTATGTATACATACTGAAAGATTTATTTTTAAGTCGAA 12 19626581 0.98775482 9 11 99 0.947368421 1.255272505 0.105263158 0.416666667 0.631578947 12 1 0 18 X:19626566-19626653 7 11.5 4842 FBgn0087008 1841.593333 29.13666667 44.69333333 0.006244593 0.394691683 0.257309069 1 -24 -11.5 0.1 dme-miR-305-3p 6mer3-8 ATGTGC X 19627148 19627153 - X_19627148_19627153_- 0.999998155 0.999999974 0.999999064 1.27E-06 e(y)3 FBtr0334278 19626546 19628098 X - 19627067 19627172 3'utr e(y)3 FlyBase G69091.1 CAGCCTAAGTAGTGTCTTCATGTGCGGTAGCTGCTTGTCCTTTTTTTTTTCGATTCGTTTAGTTTAGATTCGGTAGATTCGTAAGCGGGGTAGGGACTTGGCTCGG 34 19627151 0.98567455 12 30 290 0.897435897 1.544068044 0.179487179 0.088235294 0.205128205 34 4 0 35 X:19627067-19627172 6 e(y)3 FBtr0334278 19626546 19628098 ATGTGC 6mer3-8 dme-miR-305-3p X - 19627126 19627216 3'utr e(y)3 FlyBase G51957.1 ATTTATAAGAACCACGCCCTCTAGCCCATGTAAGTAGTTAAGCACAGCCTAAGTAGTGTCTTCATGTGCGGTAGCTGCTTGTCCTTTTTTT 19 19627141 0.980642167 7 19 140 1 1.491361694 0.451612903 0.368421053 0.612903226 19 0 0 31 X:19627126-19627216 6 18 4843 FBgn0087008 1841.593333 29.13666667 44.69333333 0.009774145 0.617778286 0.40274463 -2 -12 -7 0.1 dme-miR-1006-3p 7mer-m8 CGAATTT X 19627241 19627247 - X_19627241_19627247_- 0.65633917 0.627401627 0.641870398 0.020461973 e(y)3 FBtr0334278 19626546 19628098 X - 19627238 19627306 3'utr e(y)3 FlyBase G69092.1 CGCACTGTGCATCTGTATTTTCTATAGACATTATATTTGATTTTAAACGTCTTATGCGCCGAATTTTTG 19 19627252 0.827323731 11 18 160 0.956521739 1.342422681 0.043478261 0.157894737 0.304347826 19 1 0 22 X:19627238-19627306 7 e(y)3 FBtr0334278 19626546 19628098 CGAATTT 7mer-m8 dme-miR-1006-3p X - 19627232 19627262 3'utr e(y)3 FlyBase G51958.1 AAACGTCTTATGCGCCGAATTTTTGAACATG 5 19627253 0.735662856 3 5 28 1 0.698970004 0 0 0 5 0 0 5 X:19627232-19627262 7 7 4844 FBgn0087008 1841.593333 29.13666667 44.69333333 0.003801056 0.240247111 0.156622912 5 6 5.5 0.1 dme-miR-14-3p 6mer3-8 AAGACT X 19627662 19627667 - X_19627662_19627667_- 0.999856483 0.999988389 0.999922436 9.33E-05 e(y)3 FBtr0334278 19626546 19628098 X - 19627598 19627693 3'utr e(y)3 FlyBase G69094.1 AACACCAAGTAGACCACGTTATGCTTAAGACTTTTTTAACGCCTAAGTTGAATAGCCTAGCACTAAGTCACAACTTCATTTGTTTCTAGTGAATTC 28 19627660 0.98952807 10 25 244 0.852941176 1.462397998 0.235294118 0.178571429 0.323529412 28 5 0 29 X:19627598-19627693 6 e(y)3 FBtr0334278 19626546 19628098 AAGACT 6mer3-8 dme-miR-14-3p X - 19627637 19627690 3'utr e(y)3 FlyBase G51961.1 ACCAAGTAGACCACGTTATGCTTAAGACTTTTTTAACGCCTAAGTTGAATAGCC 17 19627660 0.9905921 4 15 152 0.92 1.361727836 0.04 0.352941176 0.56 17 2 0 23 X:19627637-19627690 6 20.5 4845 FBgn0087008 1841.593333 29.13666667 44.69333333 0.011131665 0.703580826 0.458681384 -7 -7 -7 0.1 dme-miR-305-3p 7mer-m1 TGTGCCG X 19641392 19641398 - X_19641392_19641398_- 0.825579258 0.825581952 0.825580605 1.91E-06 CG12237 FBtr0074761 19641189 19641776 X - 19641374 19641409 3'utr CG12237 FlyBase G69125.1 ATTTATATCTGTGTGCCGGGACTTTACCTGCAAAAC 20 19641396 0.827919462 5 20 160 1 1.397940009 0.12 0.25 0.4 20 0 0 25 X:19641374-19641409 7 CG12237 FBtr0074761 19641189 19641776 TGTGCCG 7mer-m1 dme-miR-305-3p X - 19641377 19641409 3'utr CG12237 FlyBase G51983.2 ATTTATATCTGTGTGCCGGGACTTTACCTGCAA 24 19641397 0.833313328 7 22 173 0.965517241 1.447158031 0.068965517 0.208333333 0.344827586 24 1 0 28 X:19641377-19641409 7 20.5 4846 FBgn0031048 357.4333333 25.82 39.46333333 0.057353353 0.793958172 0.51946955 -2 -1 -1.5 0.1 dme-miR-7-5p 6mer3-8 GTCTTC X 19644330 19644335 + X_19644330_19644335_+ 0.993880433 0.921756244 0.957818339 0.050999511 Sec61gamma FBtr0340610 19644092 19644518 X + 19644255 19644409 3'utr Sec61gamma FlyBase G62988.1 ACGTATTGTAATGTTTCGATATTCCATTCATGAACAAGTTAGTTAATAAGATTCAAATGTAAAAAGGAATCACCCGTCTTCATAGCATTTGTTTGGGGTGCGCATCCCCGCTAATAAATGTTAAATTGATTTTCCGTGTACAAATGAGATTCTTT 28 19644334 0.977875513 13 26 180 0.9375 1.477121255 0.1875 0.107142857 0.21875 28 2 0 30 X:19644255-19644409 6 Sec61gamma FBtr0074745|FBtr0344986|FBtr0340610 19644092|19644092|19644092 19644395|19644395|19644518 GTCTTC 6mer3-8 dme-miR-7-5p X + 19644309 19644364 3'utr Sec61gamma FlyBase G47521.1 AAATGTAAAAAGGAATCACCCGTCTTCATAGCATTTGTTTGGGGTGCGCATCCCCG 10 19644335 0.968631695 5 8 53 0.909090909 1 0.181818182 0.1 0.181818182 10 1 0 10 X:19644309-19644364 6 12 4847 FBgn0031049 488 95.01 145.01 0.024590164 0.126302494 0.082752914 -4 -5 -4.5 0.1 dme-miR-965-3p 8mer-A1 TACGCTTA X 19646812 19646819 - X_19646812_19646819_- 0.625361135 0.625364918 0.625363027 2.69E-06 Ranbp21 FBtr0340614|FBtr0074759 19646304|19646587 19647574|19647574 X - 19646783 19646836 3'utr Ranbp21 FlyBase G69132.1 AGGAATATTTCTGAAATTACGCTTAGGTTTAGTTGATAGGCAAAAGTTATTATT 45 19646820 0.864449139 8 37 452 0.826923077 1.031408464 0.038461538 0.133333333 0.25 45 6 3 43 X:19646783-19646836 8 Ranbp21 FBtr0074759|FBtr0340614 19646587|19646304 19647574|19647574 TACGCTTA 8mer-A1 dme-miR-965-3p X - 19646790 19646842 3'utr Ranbp21 FlyBase G51991.1 ATTTGAAGGAATATTTCTGAAATTACGCTTAGGTTTAGTTGATAGGCAAAAGT 20 19646820 0.943693021 8 17 174 0.903225806 1.447158031 0.129032258 0.4 0.612903226 20 3 0 28 X:19646790-19646842 8 29.5 4848 FBgn0031051 883.0066667 17.98 27.40666667 0.033408581 1.640711902 1.076380443 1 1 1 0.1 dme-miR-1003-3p 6mer2-7 TGTGAG X 19676230 19676235 - X_19676230_19676235_- 0.980355428 0.999082791 0.98971911 0.013242272 dome FBtr0074756 19676059 19676538 X - 19676196 19676253 3'utr dome FlyBase G69148.1 TGTATTCTTTGCGATGCGTGTGAGGCAGAAAGTATTTGTAACGCAATAGTATTTTTTT 22 19676233 0.974101478 7 21 132 1 1.477121255 0.433333333 0.181818182 0.4 22 0 0 30 X:19676196-19676253 6 dome FBtr0074756 19676059 19676538 TGTGAG 6mer2-7 dme-miR-1003-3p X - 19676209 19676246 3'utr dome FlyBase G52001.1 TTTGCGATGCGTGTGAGGCAGAAAGTATTTGTAACGCA 11 19676233 0.861398578 2 10 55 0.947368421 1.255272505 0.368421053 0.636363636 0.789473684 11 1 0 18 X:19676209-19676246 6 16 4849 FBgn0043903 649.3333333 16.12333333 24.73333333 0.024640657 0.992350631 0.64690027 -2 -2 -2 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT X 19676314 19676320 - X_19676314_19676320_- 0.658027629 0.656006961 0.657017295 0.00142878 dome FBtr0074756 19676059 19676538 X - 19676265 19676454 3'utr dome FlyBase G69149.1 CTTCAGCCGCATATCCTTCCAACGCCATGATCTGGTCACCGGATCGCCCCAGCAACCAAAATCCAGGACGAGGAACCCAGAACCCAGAACCTGTAAACTAGAATCTGGAATCTGGAAACTAGAAACCACTGTCGGGCAGCTGTTTATAGTAATTAGTGAAAACTCCTCGGACGAATGTAGTTTTACGTTT 138 19676311 0.979771602 26 126 868 0.905660377 1.857332496 0.100628931 0.123188406 0.238993711 138 14 1 144 X:19676265-19676454 7 dome FBtr0074756 19676059 19676538 GGCAGCT 7mer-m8 dme-miR-980-3p X - 19676264 19676339 3'utr dome FlyBase G52002.1 AAACTAGAAACCACTGTCGGGCAGCTGTTTATAGTAATTAGTGAAAACTCCTCGGACGAATGTAGTTTTACGTTTG 58 19676311 0.751639616 10 53 404 0.896551724 1.892094603 0.068965517 0.344827586 0.563218391 58 9 0 78 X:19676264-19676339 7 70.5 4850 FBgn0043903 649.3333333 16.12333333 24.73333333 0.108572895 4.372544966 2.850404313 -9 -9 -9 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG X 19686435 19686441 + X_19686435_19686441_+ 0.671796082 0.671796082 0.671796082 0 Ubqn FBtr0074750|FBtr0340612 19686065|19686065 19687240|19687658 X + 19686344 19686472 3'utr Ubqn FlyBase G63041.1 AACGAGCATAGTTGCCTCGAGATCGGAGAGATACTAGATATAGGTGGGTGATATGAATGACGCCGGTGAGAATGTTAGATAGGGATCGCATACCAAAGTGTTAGCACTTTCGTAGTTGATATCAGATTT 50 19686434 0.97752748 13 48 315 0.965517241 1.748188027 0.24137931 0.12 0.24137931 50 2 0 56 X:19686344-19686472 7 Ubqn FBtr0074750|FBtr0340612 19686065|19686065 19687240|19687658 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 19686353 19686460 3'utr Ubqn FlyBase G47549.1 AGTTGCCTCGAGATCGGAGAGATACTAGATATAGGTGGGTGATATGAATGACGCCGGTGAGAATGTTAGATAGGGATCGCATACCAAAGTGTTAGCACTTTCGTAGTT 40 19686442 0.962332356 13 36 226 0.916666667 1.439332694 0.166666667 0.375 0.583333333 40 4 1 55 X:19686353-19686460 7 25 4851 FBgn0031057 2464.196667 86.81666667 133.1533333 0.010145294 0.287963141 0.187753467 1 -7 -3 0.1 "dme-miR-995-3p,dme-miR-998-3p" 7mer-A1 GGTGCTA X 19686819 19686825 + X_19686819_19686825_+ 0.704425088 0.80089961 0.752662349 0.068217773 Ubqn FBtr0074750|FBtr0340612 19686065|19686065 19687240|19687658 X + 19686716 19686848 3'utr Ubqn FlyBase G63043.1 CAGATGCGAATTCCAGTTTTGTGTTTAAGAAAAAAGAATCGGTACAGAGATCAGAGGCGTAGTATATATCCTGTGTTCTGGTCAGGCAGTTTAGTTTTAGTCGGGTGCTAGTGGGCGTGGGCTATAGCCGCAG 96 19686827 0.984911161 15 94 758 0.991150442 2.049218023 0.353982301 0.135416667 0.265486726 96 1 0 112 X:19686716-19686848 7 Ubqn FBtr0074750|FBtr0340612 19686065|19686065 19687240|19687658 GGTGCTA 7mer-A1 "dme-miR-995-3p,dme-miR-998-3p" X + 19686750 19686845 3'utr Ubqn FlyBase G47550.1 AGAATCGGTACAGAGATCAGAGGCGTAGTATATATCCTGTGTTCTGGTCAGGCAGTTTAGTTTTAGTCGGGTGCTAGTGGGCGTGGGCTATAGCCG 65 19686827 0.984724916 10 65 515 1 1.977723605 0.442105263 0.369230769 0.568421053 65 0 0 95 X:19686750-19686845 7 54.5 4852 FBgn0031057 2464.196667 86.81666667 133.1533333 0.022116741 0.627759647 0.409302558 -8 -8 -8 0.1 dme-miR-79-3p 6mer2-7 AGCTTT X 19687401 19687406 + X_19687401_19687406_+ 0.999986118 1 0.999993059 9.83E-06 Ubqn FBtr0340612 19686065 19687658 X + 19687391 19687534 3'utr Ubqn FlyBase G63047.1 ACTTTCGAAAAGCTTTCCTTCGCGCGCTCACCGTTTATATAAGATATGGATTCAGTGTATACCCTGTAAGTGCTACCACCACATAGCCTCGCTCGTCCGCTGTGGGATTGGCTGGTCGGCCGGCTGGCTGGCTGGCCGGCTGGC 27 19687406 0.981930927 16 25 179 0.928571429 1.414973348 0.214285714 0.037037037 0.071428571 27 2 0 26 X:19687391-19687534 6 Ubqn FBtr0340612 19686065 19687658 AGCTTT 6mer2-7 dme-miR-79-3p X + 19687396 19687482 3'utr Ubqn FlyBase G47552.1 CGAAAAGCTTTCCTTCGCGCGCTCACCGTTTATATAAGATATGGATTCAGTGTATACCCTGTAAGTGCTACCACCACATAGCCTCGC 16 19687407 0.981339348 9 14 94 0.80952381 1.230448921 0.285714286 0.25 0.428571429 16 4 0 17 X:19687396-19687482 6 8 4853 FBgn0031057 2464.196667 86.81666667 133.1533333 0.003246494 0.092148205 0.060081109 -5 -6 -5.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 19694392 19694398 - X_19694392_19694398_- 0.80129902 0.800973141 0.80113608 0.000230446 CG14229 FBtr0335023|FBtr0335023|FBtr0335023|FBtr0074753|FBtr0074753|FBtr0074753|FBtr0344968|FBtr0344968|FBtr0344968 19693975|19693975|19693975|19694196|19694196|19694196|19694196|19694196|19694196 19694566|19694566|19694566|19694566|19694566|19694566|19694566|19694566|19694566 X - 19694348 19694462 3'utr CG14229 FlyBase G69165.1 CGCCTCCGTTCAGTCTTCTCTGCGCACGGATTCGGATATCCGTGTCTGGAGTCACTTGCGTTTGTGTGATAAGCATTGTTTACTTGCATGGCATTAGCATCACCCCTGATGCATA 74 19694400 0.718083136 18 69 579 0.939759036 1.591064607 0.13253012 0.121621622 0.21686747 74 4 1 78 X:19694348-19694462 7 CG14229 FBtr0344968|FBtr0344968|FBtr0344968|FBtr0074753|FBtr0074753|FBtr0074753|FBtr0335023|FBtr0335023|FBtr0335023 19694196|19694196|19694196|19694196|19694196|19694196|19693975|19693975|19693975 19694566|19694566|19694566|19694566|19694566|19694566|19694566|19694566|19694566 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 19694354 19694426 3'utr CG14229 FlyBase G52014.1 TATCCGTGTCTGGAGTCACTTGCGTTTGTGTGATAAGCATTGTTTACTTGCATGGCATTAGCATCACCCCTGA 42 19694400 0.896901871 9 35 332 0.861538462 1.748188027 0.092307692 0.333333333 0.569230769 42 9 0 56 X:19694354-19694426 7 37 4854 FBgn0031059 134 20.55333333 31.35333333 0.276119403 1.800194616 1.18009781 2 2 2 0.1 dme-miR-7-5p 7mer-m8 GTCTTCC X 19699007 19699013 + X_19699007_19699013_+ 0.705907339 0.705890017 0.705898678 1.22E-05 Cdc42 FBtr0309215|FBtr0074751|FBtr0309214 19698593|19698593|19698593 19699938|19699252|19699938 X + 19698958 19699065 3'utr Cdc42 FlyBase G63059.1 TTGGTCCACTGTGACCAGGCGGCTGGGCAGTTGCCCCCAACTCGGGACAGTCTTCCGCCCCACAAGCTTCAGCTCCAATCCCCGCCAGGATCCAATCGCAGCCAATCG 38 19699010 0.92036885 9 36 149 0.952380952 1.602059991 0.047619048 0.105263158 0.19047619 38 2 0 40 X:19698958-19699065 7 Cdc42 FBtr0309214|FBtr0074751|FBtr0309215 19698593|19698593|19698593 19699938|19699252|19699938 GTCTTCC 7mer-m8 dme-miR-7-5p X + 19698937 19699038 3'utr Cdc42 FlyBase G47559.1 TATTTTGGTCGGTTTCTATGTTTGGTCCACTGTGACCAGGCGGCTGGGCAGTTGCCCCCAACTCGGGACAGTCTTCCGCCCCACAAGCTTCAGCTCCAATCC 27 19699010 0.932785867 4 25 106 1 1.568201724 0.027027027 0.333333333 0.513513514 27 0 0 37 X:19698937-19699038 7 25.5 4855 FBgn0010341 5859.21 357.3733333 549.4666667 0.004352123 0.071353953 0.046408639 -3 -3 -3 0.1 dme-miR-8-3p 6mer2-7 AGTATT X 19699536 19699541 + X_19699536_19699541_+ 0.999999954 1 0.999999977 0 Cdc42 FBtr0309215|FBtr0309214 19698593|19698593 19699938|19699938 X + 19699287 19699658 3'utr Cdc42 FlyBase G63061.1 AAAAACAATCCAGAACAGAACAGAATGTGGGGCGATTCGAAAAGAACCATGCACTTATTCGTTTTGCCTCAGTCGATGAAATCCGCGGGAATCCACGTCGATATTGTCCCGAAAGGAGCAACGTGCGAGAATTATATTAAATATTTATGATAACTGATCGCGTAATGTTTAAACAGCGGAGGTCGGATGGAATTCGCTAGCATGCAGATATGAAAGTGAAGCTTATTATGTAATAAAACTAAGCGTATGAGTATTGAAATATGATTAAAAGTAAATTAAATGAACCTAAAGGAGGAGATAAAGGATCAGCAAGAGATGCGAGAACCGAACTAGGCGTTGCAACCACAACACAAACACACATCTGAAATCTAC 81 19699534 0.965086363 37 76 399 0.951456311 1.69019608 0.213592233 0.222222222 0.388349515 81 4 1 98 X:19699287-19699658 6 Cdc42 FBtr0309214|FBtr0309215 19698593|19698593 19699938|19699938 AGTATT 6mer2-7 dme-miR-8-3p X + 19699424 19699657 3'utr Cdc42 FlyBase G47561.1 TAAATATTTATGATAACTGATCGCGTAATGTTTAAACAGCGGAGGTCGGATGGAATTCGCTAGCATGCAGATATGAAAGTGAAGCTTATTATGTAATAAAACTAAGCGTATGAGTATTGAAATATGATTAAAAGTAAATTAAATGAACCTAAAGGAGGAGATAAAGGATCAGCAAGAGATGCGAGAACCGAACTAGGCGTTGCAACCACAACACAAACACACATCTGAAATCTA 42 19699534 0.965544632 22 39 211 0.93220339 1.263241435 0.220338983 0.333333333 0.525423729 42 2 2 55 X:19699424-19699657 6 15.5 4856 FBgn0010341 5859.21 357.3733333 549.4666667 0.002645408 0.043372011 0.028209173 2 2 2 0.1 dme-miR-277-3p 7mer-m8 TGCATTT X 19699819 19699825 + X_19699819_19699825_+ 0.588692964 0.543073241 0.565883102 0.03225807 Cdc42 FBtr0309215|FBtr0309214 19698593|19698593 19699938|19699938 X + 19699784 19699841 3'utr Cdc42 FlyBase G63062.1 AAAACGACAAAAGATGAAAGGAAAATAAGAACTAATGCATTTTTTAATATTTTTATAT 25 19699809 0.968571233 6 24 147 0.931034483 1.431363764 0.068965517 0.12 0.24137931 25 2 0 27 X:19699784-19699841 7 Cdc42 FBtr0309214|FBtr0309215 19698593|19698593 19699938|19699938 TGCATTT 7mer-m8 dme-miR-277-3p X + 19699799 19699842 3'utr Cdc42 FlyBase G47562.1 GAAAGGAAAATAAGAACTAATGCATTTTTTAATATTTTTATATG 16 19699809 0.954251777 6 15 81 1 1.380211242 0.166666667 0.4375 0.625 16 0 0 24 X:19699799-19699842 7 18.5 4857 FBgn0010341 5859.21 357.3733333 549.4666667 0.003157422 0.051766593 0.033669012 10 10 10 0.1 dme-miR-970-3p 6mer3-8 TCTTAT X 19699912 19699917 + X_19699912_19699917_+ 0.999999998 0.954958834 0.977479416 0.031848938 Cdc42 FBtr0309215|FBtr0309214 19698593|19698593 19699938|19699938 X + 19699863 19699939 3'utr Cdc42 FlyBase G63063.1 ATTTTTTTTCTAGACCTTAGTGATTTAACATTATTGATTTCAGATAATATCTTATAATAAAACGAAATCCAAAACGA 41 19699887 0.69340635 10 41 377 1 1.72427587 0.018867925 0.292682927 0.452830189 41 0 0 53 X:19699863-19699939 6 Cdc42 FBtr0309214|FBtr0309215 19698593|19698593 19699938|19699938 TCTTAT 6mer3-8 dme-miR-970-3p X + 19699865 19699924 3'utr Cdc42 FlyBase G47563.1 TTTTTTTCTAGACCTTAGTGATTTAACATTATTGATTTCAGATAATATCTTATAATAAAA 27 19699887 0.761689656 7 26 245 0.974358974 1.579783597 0.051282051 0.296296296 0.512820513 27 1 0 38 X:19699865-19699924 6 7.5 4858 FBgn0010341 5859.21 357.3733333 549.4666667 0.001280036 0.020986457 0.0136496 25 25 25 0.1 dme-miR-2b-2-5p 7mer-m8 TTGAAGA X 19734300 19734306 + X_19734300_19734306_+ 0.629004685 0.631360047 0.630182366 0.001665449 AP-1-2beta FBtr0074789 19734229 19734581 X + 19734229 19734315 stop_codon AP-1-2beta FlyBase G63090.1 AAGCGTTCCATGGCGCACATCCGATGGCATAGGATAAGCACAAAGCAATTGGAGCTATCGATTTGCGTGTGTTGAAGATTAGCTCAA 26 19734307 0.939278263 7 26 158 1 1.531478917 0.058823529 0.269230769 0.441176471 26 0 0 34 X:19734229-19734315 7 AP-1-2beta FBtr0074789 19734229 19734581 TTGAAGA 7mer-m8 dme-miR-2b-2-5p X + 19734287 19734319 3'utr AP-1-2beta FlyBase G47580.1 CGATTTGCGTGTGTTGAAGATTAGCTCAACAAT 11 19734307 0.819959957 2 11 82 1 1.204119983 0.0625 0.363636364 0.5625 11 0 0 16 X:19734287-19734319 7 12 4859 FBgn0010380 943.23 35.09 53.51 0.012722242 0.341977771 0.224257148 -7 -7 -7 0.1 dme-miR-317-3p 6mer3-8 TGTGTT X 19740770 19740775 - X_19740770_19740775_- 0.999991181 0.996541405 0.998266293 0.002439377 CoVIb FBtr0074815|FBtr0074817|FBtr0308683|FBtr0074816 19740535|19740684|19740535|19740535 19740906|19740906|19740906|19740906 X - 19740754 19740802 3'utr CoVIb FlyBase G69183.1 ATCCGGCAATTGCAACAGAGACTAGTTTGTGTTTGTGCTTTCCCCAGCG 7 19740776 0.970837976 4 7 46 1 1.079181246 0 0.285714286 0.583333333 7 0 0 12 X:19740754-19740802 6 CoVIb FBtr0074816|FBtr0308683|FBtr0074817|FBtr0074815 19740535|19740535|19740684|19740535 19740906|19740906|19740906|19740906 TGTGTT 6mer3-8 dme-miR-317-3p X - 19740774 19740812 3'utr CoVIb FlyBase G52032.1 GGTAACCAGAATCCGGCAATTGCAACAGAGACTAGTTTG 5 19740777 0.960901011 2 4 22 0.8 0.602059991 0.4 0 0 5 1 0 4 X:19740774-19740812 1 4.5 4860 FBgn0031066 3558.956667 798.5366667 1223.406667 0.001264416 0.005635308 0.003678254 1 2 1.5 0.1 dme-miR-308-3p 7mer-m1 TGTGATT X 19741426 19741432 - X_19741426_19741432_- 0.521223854 0.521223855 0.521223855 0 CG18809 FBtr0331746|FBtr0331747|FBtr0074811|FBtr0074810 19741222|19741222|19741222|19741222 19741779|19741779|19741779|19741779 X - 19741401 19741454 3'utr CG18809 FlyBase G69186.1 CGCAAACTGAAGAACTAACCATTGTGATTTATATATCTATCTCTTCCTTCCCGT 14 19741433 0.983668026 5 14 110 1 1.255272505 0 0.285714286 0.444444444 14 0 0 18 X:19741401-19741454 7 CG18809 FBtr0074810|FBtr0074811|FBtr0331747|FBtr0331746 19741222|19741222|19741222|19741222 19741779|19741779|19741779|19741779 TGTGATT 7mer-m1 dme-miR-308-3p X - 19741399 19741450 3'utr CG18809 FlyBase G52035.1 AACTGAAGAACTAACCATTGTGATTTATATATCTATCTCTTCCTTCCCGTTT 7 19741433 0.989581504 3 7 68 1 0.954242509 0.222222222 0.142857143 0.333333333 7 0 0 9 X:19741399-19741450 7 10 4861 FBgn0042132 250.6633333 14.18333333 21.89333333 0.039894148 0.705052879 0.456760049 1 1 1 0.1 dme-miR-304-5p 6mer2-7 GAGATT X 19745155 19745160 + X_19745155_19745160_+ 0.99583421 0.995748173 0.995791192 6.08E-05 Rpp20 FBtr0091935|FBtr0346040 19745104|19745104 19745747|19745898 X + 19745116 19745188 3'utr Rpp20 FlyBase G63094.1 CTCTCGGAGCTGGTGCGCTGGCTGGGGCTCACCGAGTTCGAGATTCTGGTCAATCTGTGCGGCCTGCTGGTGT 48 19745159 0.790044023 6 48 327 1 1.755874856 0.210526316 0.1875 0.315789474 48 0 0 57 X:19745116-19745188 6 Rpp20 FBtr0346040|FBtr0091935 19745104|19745104 19745898|19745747 GAGATT 6mer2-7 dme-miR-304-5p X + 19745114 19745177 3'utr Rpp20 FlyBase G47584.1 AACTCTCGGAGCTGGTGCGCTGGCTGGGGCTCACCGAGTTCGAGATTCTGGTCAATCTGTGCGG 30 19745159 0.787954229 5 30 200 1 1.612783857 0.268292683 0.3 0.487804878 30 0 0 41 X:19745114-19745177 6 35.5 4862 FBgn0066304 95 9.253333333 14.03666667 0.373684211 3.836455331 2.529090477 -4 -4 -4 0.1 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG X 19745346 19745352 + X_19745346_19745352_+ 0.702970976 0.702962962 0.702966969 5.66E-06 Rpp20 FBtr0091935|FBtr0346040 19745104|19745104 19745747|19745898 X + 19745222 19745365 3'utr Rpp20 FlyBase G63095.1 AGGCCAGGGCCGGACCCGGTGGCATACTCCCGGAGCCCATGGGCGACTGGTTCACCGTCTTCAGCCCCCTGTTCTTCATCGACATCTGCAACGCGTACTTTTGCGTCATTGTGGGCATCCGCATGTACCTGGACTCTAACAACA 71 19745345 0.972000771 10 71 410 1 1.939519253 0.091954023 0.183098592 0.333333333 71 0 0 87 X:19745222-19745365 7 Rpp20 FBtr0346040|FBtr0091935 19745104|19745104 19745898|19745747 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" X + 19745321 19745368 3'utr Rpp20 FlyBase G47585.2 TTTGCGTCATTGTGGGCATCCGCATGTACCTGGACTCTAACAACAAGC 49 19745345 0.830790965 4 49 277 1 1.86923172 0 0.367346939 0.581081081 49 0 0 74 X:19745321-19745368 7 55.5 4863 FBgn0066304 95 9.253333333 14.03666667 0.584210526 5.997838617 3.953930183 1 1 1 0.1 dme-miR-308-3p 7mer-m1 TGTGATT X 19758906 19758912 + X_19758906_19758912_+ 0.521223855 0.521223853 0.521223854 0 Pmp70 FBtr0335155|FBtr0074795|FBtr0335157|FBtr0335156 19758756|19758756|19758756|19758756 19759280|19759280|19759280|19759280 X + 19758879 19758925 3'utr Pmp70 FlyBase G63114.1 AAGTTGGAAATGCTTCCTTGTTTCGATTGTGATTGTTTCTTTTGTAC 47 19758905 0.687773863 6 45 588 0.960784314 1.389166084 0.098039216 0.085106383 0.156862745 47 1 1 49 X:19758879-19758925 7 Pmp70 FBtr0335156|FBtr0335157|FBtr0074795|FBtr0335155 19758756|19758756|19758756|19758756 19759280|19759280|19759280|19759280 TGTGATT 7mer-m1 dme-miR-308-3p X + 19758875 19758919 3'utr Pmp70 FlyBase G47596.1 TTGCAAGTTGGAAATGCTTCCTTGTTTCGATTGTGATTGTTTCTT 39 19758912 0.876690919 8 36 468 0.925925926 1.096910013 0 0.307692308 0.5 39 1 3 50 X:19758875-19758919 7 42 4864 FBgn0031069 864.5033333 34.21666667 52.20333333 0.048582809 1.227471992 0.804546325 1 -6 -2.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG X 19759091 19759096 + X_19759091_19759096_+ 0.999983981 0.999952878 0.999968429 2.20E-05 Pmp70 FBtr0335155|FBtr0074795|FBtr0335157|FBtr0335156 19758756|19758756|19758756|19758756 19759280|19759280|19759280|19759280 X + 19759021 19759173 3'utr Pmp70 FlyBase G63115.1 AAAGTAGTCGGCGCACAGCCACAAGCGATGGATGAGCGTTTAGAAAAGCTTTTAGTGAATAACACACCCATACCTGTAGTAGACCTGCATACCGCACAAGTCCCAAATCGCGCATAGAGAACTTATAGTAATTTGTAAAATACGCTTGGCTTA 35 19759096 0.975478859 15 33 208 0.951219512 1.591064607 0.12195122 0.142857143 0.268292683 35 2 0 39 X:19759021-19759173 6 Pmp70 FBtr0335156|FBtr0335157|FBtr0074795|FBtr0335155 19758756|19758756|19758756|19758756 19759280|19759280|19759280|19759280 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" X + 19759037 19759111 3'utr Pmp70 FlyBase G47598.1 AGCCACAAGCGATGGATGAGCGTTTAGAAAAGCTTTTAGTGAATAACACACCCATACCTGTAGTAGACCTGCATA 9 19759097 0.9629874 5 7 42 0.9375 1.176091259 0.0625 0.444444444 0.6875 9 1 0 15 X:19759037-19759111 6 10 4865 FBgn0031069 864.5033333 34.21666667 52.20333333 0.011567335 0.292255236 0.191558649 -5 -6 -5.5 0.1 dme-miR-79-3p 6mer3-8 TAGCTT X 19759339 19759344 - X_19759339_19759344_- 0.99996376 0.999999997 0.999981879 2.56E-05 CG12702 FBtr0074809|FBtr0335137|FBtr0346378 19759171|19759171|19759171 19759370|19759370|19759370 X - 19759296 19759348 3'utr CG12702 FlyBase G69188.1 AATATAGCTTAGACTAGTAGCATCTATCGATGAACTCCACTCCGCCGGCATCA 17 19759340 0.892375292 4 15 111 0.842105263 1.204119983 0.052631579 0.117647059 0.210526316 17 3 0 16 X:19759296-19759348 6 CG12702 FBtr0346378|FBtr0335137|FBtr0074809 19759171|19759171|19759171 19759370|19759370|19759370 TAGCTT 6mer3-8 dme-miR-79-3p X - 19759297 19759350 3'utr CG12702 FlyBase G52036.1 TTAATATAGCTTAGACTAGTAGCATCTATCGATGAACTCCACTCCGCCGGCATC 6 19759340 0.980243268 3 6 45 1 0.903089987 0 0.333333333 0.5 6 0 0 8 X:19759297-19759350 6 7.5 4866 FBgn0031070 235.6866667 9.673333333 14.61 0.03182191 0.77532736 0.513347023 -4 -4 -4 0.1 dme-miR-263a-5p 7mer-A1 TGCCATA X 19776530 19776536 - X_19776530_19776536_- 0.782871855 0.782911823 0.782891839 2.82E-05 vfl FBtr0344733|FBtr0074808|FBtr0345014|FBtr0074807 19775985|19775985|19775985|19775985 19776884|19777495|19777495|19777495 X - 19776471 19776539 5'utr vfl FlyBase G69199.1 GAATGCCATATACACGATATGTAAACTAAAAATCAGCAACTATATGCCAATTGATATATATATATATAC 7 19776529 0.972721016 5 6 38 0.9 0.954242509 0.1 0.285714286 0.5 7 1 0 9 X:19776471-19776539 7 vfl FBtr0345014|FBtr0074807|FBtr0344733|FBtr0074808 19775985|19775985|19775985|19775985 19777495|19777495|19776884|19777495 TGCCATA 7mer-A1 dme-miR-263a-5p X - 19776473 19776549 5'utr vfl FlyBase G52044.1 AACAACACACGAATGCCATATACACGATATGTAAACTAAAAATCAGCAACTATATGCCAATTGATATATATATATAT 6 19776531 0.890362711 6 6 26 1 0.77815125 0.333333333 0 0 6 0 0 6 X:19776473-19776549 7 3 4867 FBgn0259789 8.736666667 0.15 0.24 0.343380389 20 12.5 -7 -5 -6 0.1 dme-miR-8-3p 6mer2-7 AGTATT X 19832499 19832504 - X_19832499_19832504_- 1 1 1 0 pico FBtr0074804|FBtr0303995|FBtr0074805|FBtr0303996 19831605|19831605|19830213|19831605 19833338|19833338|19833338|19833338 X - 19832410 19832526 3'utr pico FlyBase G69207.1 TTTTAATTGTTTAGTTGCTCGTAGTATTGATTTTATACATTATATCTTTTTTTTGCGATTATCTTTGTAACGGTAGAGTGAACGTTTTGTGAGCGCATGAAATGCGCTGCGCTAGCA 31 19832495 0.993480905 11 30 371 0.972972973 1.556302501 0.189189189 0.161290323 0.297297297 31 1 0 36 X:19832410-19832526 6 pico FBtr0074804|FBtr0303995|FBtr0074805|FBtr0303996 19831605|19831605|19830213|19831605 19833338|19833338|19833338|19833338 AGTATT 6mer2-7 dme-miR-8-3p X - 19832481 19832525 3'utr pico FlyBase G52052.1 TTTAATTGTTTAGTTGCTCGTAGTATTGATTTTATACATTATATC 13 19832495 0.871755906 8 11 153 0.772727273 1.230448921 0 0.538461538 0.727272727 13 5 0 17 X:19832481-19832525 6 18.5 4868 FBgn0261811 2157.516667 40.99333333 63.13 0.008574673 0.451292893 0.293046095 -9 -9 -9 0.1 dme-miR-277-3p 7mer-m8 TGCATTT X 19832607 19832613 - X_19832607_19832613_- 0.619448527 0.619327039 0.619387783 8.59E-05 pico FBtr0074804|FBtr0303995|FBtr0074805|FBtr0303996 19831605|19831605|19830213|19831605 19833338|19833338|19833338|19833338 X - 19832592 19832637 3'utr pico FlyBase G69208.1 ATTTTAGTTTGTAAAAAGGAAAAATGCATTTTAGAAACGATAGTGC 19 19832610 0.85823377 6 18 151 0.956521739 1.342422681 0.086956522 0.210526316 0.347826087 19 1 0 22 X:19832592-19832637 7 pico FBtr0074804|FBtr0303995|FBtr0074805|FBtr0303996 19831605|19831605|19830213|19831605 19833338|19833338|19833338|19833338 TGCATTT 7mer-m8 dme-miR-277-3p X - 19832584 19832637 3'utr pico FlyBase G52053.1 ATTTTAGTTTGTAAAAAGGAAAAATGCATTTTAGAAACGATAGTGCATTATTTA 13 19832611 0.978217934 5 12 94 0.941176471 1.204119983 0 0.230769231 0.411764706 13 1 0 16 X:19832584-19832637 7 14.5 4869 FBgn0261811 2157.516667 40.99333333 63.13 0.00672069 0.353716051 0.229684777 -3 -2 -2.5 0.1 dme-miR-988-3p 6mer3-8 ACAAGG X 19905112 19905117 + X_19905112_19905117_+ 0.986170849 0.947276936 0.966723892 0.02750214 Hers FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800|FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19906687|19906687|19906687|19906687|19908108|19908108|19906687|19906687 X + 19904824 19905126 stop_codon Hers FlyBase G63192.1 GGGTTTCCAGTGCGAACGGTGCCGGAACACACCAATCCGGAGCTGGTGATGTTCTGCCGCCGAGCCTATGAGTTCCGGACGCGACGTCTGCTCAAGCTGCCCCATAAGAACGGGCTCGTGTGCAGCTCCAGCTAGCGCAAGGCATGAGCCATTGCGATCGAGCTCCCGTCAACCCAGGCAATGGATGAACTGCGGAGTGTAGGAACAATAGCTTAAATTCAGATTGCAGTGGGAATTGGATATTGATATGCGGAGTGGCGATGGAGAAAGCCCTGGCAGAGGGGATGGACAAGGAACTACTCA 75 19905109 0.988835788 33 73 276 0.96969697 1.982271233 0.343434343 0.266666667 0.444444444 75 3 0 96 X:19904824-19905126 6 Hers FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523|FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19908108|19908108|19906687|19906687|19906687|19906687|19906687|19906687 ACAAGG 6mer3-8 dme-miR-988-3p X + 19905078 19905126 3'utr Hers FlyBase G47651.2 GTGGCGATGGAGAAAGCCCTGGCAGAGGGGATGGACAAGGAACTACTCA 15 19905109 0.910054602 2 12 29 0.739130435 0.929418926 0.130434783 0.333333333 0.565217391 15 5 1 17 X:19905078-19905126 6 14.5 4870 FBgn0052529 4274.003333 62.55666667 96.43 0.003392604 0.231789844 0.150368143 3 3 3 0.1 dme-miR-8-3p 7mer-m8 CAGTATT X 19905160 19905166 + X_19905160_19905166_+ 0.661614902 0.661615226 0.661615064 2.12E-07 Hers FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800|FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19906687|19906687|19906687|19906687|19908108|19908108|19906687|19906687 X + 19905142 19905178 3'utr Hers FlyBase G63193.1 ATTGTTTTGATCAGTCTACAGTATTGTTAAAGATATT 19 19905158 0.612760804 6 17 186 0.9 1.255272505 0 0.052631579 0.1 19 2 0 18 X:19905142-19905178 7 Hers FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523|FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19908108|19908108|19906687|19906687|19906687|19906687|19906687|19906687 CAGTATT 7mer-m8 dme-miR-8-3p X + 19905127 19905180 3'utr Hers FlyBase G47652.1 TAGAGAGAAAGTTACATTGTTTTGATCAGTCTACAGTATTGTTAAAGATATTTT 19 19905157 0.989674669 8 18 176 0.961538462 1.397940009 0.192307692 0.263157895 0.461538462 19 1 0 25 X:19905127-19905180 7 18 4871 FBgn0052529 4274.003333 62.55666667 96.43 0.004211508 0.287739117 0.186663901 2 3 2.5 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG X 19905224 19905229 + X_19905224_19905229_+ 0.999958014 0.900480575 0.950219295 0.070341144 Hers FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800|FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19906687|19906687|19906687|19906687|19908108|19908108|19906687|19906687 X + 19905185 19905239 3'utr Hers FlyBase G63194.1 CTTTGTTGTTAAGAGATATCTGCAAGGATGGGCCCCCGGGCTGTGCATCTGCATT 35 19905205 0.76323209 4 35 131 1 1.579783597 0.315789474 0.085714286 0.157894737 35 0 0 38 X:19905185-19905239 6 Hers FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523|FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19908108|19908108|19906687|19906687|19906687|19906687|19906687|19906687 GCTGTG 6mer2-7 dme-miR-1008-3p X + 19905188 19905236 3'utr Hers FlyBase G47653.1 TGTTGTTAAGAGATATCTGCAAGGATGGGCCCCCGGGCTGTGCATCTGC 20 19905205 0.877621212 7 20 71 1 1.556302501 0.194444444 0.6 0.777777778 20 0 0 36 X:19905188-19905236 6 25.5 4872 FBgn0052529 4274.003333 62.55666667 96.43 0.005966303 0.407630415 0.264440527 19 19 19 0.1 dme-miR-932-5p 7mer-m8 GGAATTG X 19905694 19905700 + X_19905694_19905700_+ 0.70297287 0.70297287 0.70297287 0 Hers FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800|FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19906687|19906687|19906687|19906687|19908108|19908108|19906687|19906687 X + 19905608 19905705 3'utr Hers FlyBase G63197.1 AAGTTGTATGTATTTATTATCATTAATATCGAGTAAGTCAGCATTCTGTGTACAGTTTTCCGCTCGCTTTTGCTCTAATCGCTCAAGGAATTGGTTTA 22 19905678 0.777246745 14 20 205 0.916666667 1.041392685 0.208333333 0.090909091 0.166666667 22 1 1 22 X:19905608-19905705 7 Hers FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523|FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19908108|19908108|19906687|19906687|19906687|19906687|19906687|19906687 GGAATTG 7mer-m8 dme-miR-932-5p X + 19905638 19905711 3'utr Hers FlyBase G47656.1 GAGTAAGTCAGCATTCTGTGTACAGTTTTCCGCTCGCTTTTGCTCTAATCGCTCAAGGAATTGGTTTAACCACC 12 19905665 0.985472996 9 11 95 0.947368421 1.255272505 0.263157895 0.5 0.684210526 12 1 0 18 X:19905638-19905711 7 3.5 4873 FBgn0052529 4274.003333 62.55666667 96.43 0.000818904 0.055949273 0.036295759 16 29 22.5 0.1 dme-miR-34-5p 6mer3-8 CACTGC X 19905853 19905858 + X_19905853_19905858_+ 0.899992827 0.999973113 0.94998297 0.070696748 Hers FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800|FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19906687|19906687|19906687|19906687|19908108|19908108|19906687|19906687 X + 19905731 19905870 3'utr Hers FlyBase G63198.1 TAGCTAAGACCCTTTCGATGGCCAAAAAGTTATTTGGTGTGCCACAGAAATCTCTGCAAATCGACTTGATGCGATTTTAATTGTCTTTTCCTCAAAACTAAATCCATTTGCTCTGTAGAGATCACTGCGGCTCTCCGAAT 19 19905841 0.983077156 11 18 147 0.952380952 1.301029996 0.19047619 0.105263158 0.19047619 19 1 0 20 X:19905731-19905870 6 Hers FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523|FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19908108|19908108|19906687|19906687|19906687|19906687|19906687|19906687 CACTGC 6mer3-8 dme-miR-34-5p X + 19905829 19905867 3'utr Hers FlyBase G47657.1 TAAATCCATTTGCTCTGTAGAGATCACTGCGGCTCTCCG 6 19905841 0.669549923 4 5 42 1 0.954242509 0.333333333 0.333333333 0.555555556 6 0 0 9 X:19905829-19905867 6 4.5 4874 FBgn0052529 4274.003333 62.55666667 96.43 0.001052877 0.071934779 0.046665975 12 12 12 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC X 19906402 19906408 + X_19906402_19906408_+ 0.661542495 0.661615639 0.661579067 5.17E-05 Hers FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800|FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19906687|19906687|19906687|19906687|19908108|19908108|19906687|19906687 X + 19906234 19906460 3'utr Hers FlyBase G63201.1 TCTAACTATAATTTCTGACATATTTGAGATTTCTGGCTCCAGAGGCGGAAAACTGGATGGCTTGACATCGATCCTTGCTAGGCGCTGTTGGTATATATTTTTATTTGTTGTTAGTTTTTGTAAGCGATTGAACACACATTTTGTACTCTTGATTTGACATTTATCTTTTGTGTTCGCCTTAGTTTGGAAATTTGATTTCAGAGACATGATTTTCTTTCGGTTAACTA 99 19906401 0.965066754 35 93 938 0.947826087 2.037426498 0.252173913 0.141414141 0.260869565 99 6 0 109 X:19906234-19906460 7 Hers FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523|FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19908108|19908108|19906687|19906687|19906687|19906687|19906687|19906687 TGTGTTC 7mer-m8 dme-miR-317-3p X + 19906244 19906445 3'utr Hers FlyBase G47659.1 ATTTCTGACATATTTGAGATTTCTGGCTCCAGAGGCGGAAAACTGGATGGCTTGACATCGATCCTTGCTAGGCGCTGTTGGTATATATTTTTATTTGTTGTTAGTTTTTGTAAGCGATTGAACACACATTTTGTACTCTTGATTTGACATTTATCTTTTGTGTTCGCCTTAGTTTGGAAATTTGATTTCAGAGACATGATTT 41 19906401 0.989288363 20 40 390 0.984375 1.799340549 0.171875 0.43902439 0.640625 41 1 0 63 X:19906244-19906445 7 14 4875 FBgn0052529 4274.003333 62.55666667 96.43 0.003275617 0.223797091 0.145183034 1 1 1 0.1 dme-miR-995-5p 7mer-A1 ATTCGGA X 20157242 20157248 - X_20157242_20157248_- 0.782911285 0.782911824 0.782911554 3.54E-07 Rab35 FBtr0070028|FBtr0333549|FBtr0333548|FBtr0303258 20156477|20155764|20157143|20157088 20157582|20157582|20157582|20157582 X - 20157214 20157254 3'utr Rab35 FlyBase G69239.1 AGTTTTATTCGGAATAATGCCAGATAGCCGTAAATTAAAGT 13 20157237 0.808350991 3 12 73 0.941176471 1.204119983 0 0.230769231 0.411764706 13 1 0 16 X:20157214-20157254 7 Rab35 FBtr0303258|FBtr0333548|FBtr0333549|FBtr0070028 20157088|20157143|20155764|20156477 20157582|20157582|20157582|20157582 ATTCGGA 7mer-A1 dme-miR-995-5p X - 20157224 20157264 3'utr Rab35 FlyBase G52073.1 TTTCCTCCTCAGTTTTATTCGGAATAATGCCAGATAGCCGT 5 20157237 0.980659776 3 5 42 1 0.903089987 0 0.4 0.625 5 0 0 8 X:20157224-20157264 7 8.5 4876 FBgn0031090 1038.15 62.16666667 96 0.008187641 0.136729223 0.088541667 -11 -11 -11 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA X 20168120 20168126 - X_20168120_20168126_- 0.823349554 0.823349554 0.823349554 0 CG9581 FBtr0070026 20168040 20168150 X - 20168093 20168150 3'utr CG9581 FlyBase G69253.1 GAGCTCACAACGAAAACCAAATTCCTAGTCATAAGCCTTTCATTCTCCCGACAACCTT 29 20168129 0.96095212 4 28 138 0.945945946 1.544068044 0.216216216 0.275862069 0.432432432 29 2 0 35 X:20168093-20168150 7 CG9581 FBtr0070026 20168040 20168150 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X - 20168043 20168144 3'utr CG9581 FlyBase G52079.1 ACAACGAAAACCAAATTCCTAGTCATAAGCCTTTCATTCTCCCGACAACCTTATGAGCTGATTTGGGTCCTAAAGTAAAGGCAGATGCTGTATTTATAAATG 20 20168128 0.975116322 6 18 113 0.884615385 1.361727836 0.153846154 0.25 0.423076923 20 3 0 23 X:20168043-20168144 7 21.5 4877 FBgn0031093 169.6733333 10.98333333 16.82 0.126714078 1.957511381 1.27824019 3 2 2.5 0.1 dme-miR-305-3p 6mer2-7 TGTGCC X 20171524 20171529 - X_20171524_20171529_- 0.999985827 1 0.999992913 1.00E-05 AnxB10 FBtr0070025|FBtr0301931 20171443|20171443 20171591|20171591 X - 20171468 20171552 3'utr AnxB10 FlyBase G69260.1 CGTGTTAATAGCTTTGATCGTAGTGTGCCTTTTAGGAAAATCGCTTTTAATGTCGTCTGCGCATGCGCACACTGTTGGCAATAAA 32 20171521 0.89442581 12 30 259 0.951219512 1.591064607 0.219512195 0.1875 0.365853659 32 2 0 39 X:20171468-20171552 6 AnxB10 FBtr0070025|FBtr0301931 20171443|20171443 20171591|20171591 TGTGCC 6mer2-7 dme-miR-305-3p X - 20171474 20171539 3'utr AnxB10 FlyBase G52084.1 TTGATCGTAGTGTGCCTTTTAGGAAAATCGCTTTTAATGTCGTCTGCGCATGCGCACACTGTTGGC 19 20171521 0.981546168 10 17 125 0.925925926 1.397940009 0.296296296 0.421052632 0.592592593 19 2 0 25 X:20171474-20171539 6 17 4878 FBgn0000084 609.39 60.31 92.3 0.027896749 0.281876969 0.184182015 -8 -8 -8 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 20182235 20182240 - X_20182235_20182240_- 0.999999749 0.999998481 0.999999115 8.49E-07 Sdic2 FBtr0345925|FBtr0345925|FBtr0345925|FBtr0089610|FBtr0089610|FBtr0089610|FBtr0345926|FBtr0345926|FBtr0345926 20181741|20181741|20181741|20182036|20182036|20182036|20181588|20181588|20181588 20182337|20182337|20182337|20182337|20182337|20182337|20182337|20182337|20182337 X - 20182216 20182249 3'utr Sdic2 FlyBase G69266.1 TGTATCTTTTGTGATCCCGCTACTGTGTATAGCC 11 20182241 0.879786836 4 11 103 1 1.146128036 0.142857143 0.181818182 0.357142857 11 0 0 14 X:20182216-20182249 6 Sdic2 FBtr0345926|FBtr0345926|FBtr0345926|FBtr0089610|FBtr0089610|FBtr0089610|FBtr0345925|FBtr0345925|FBtr0345925 20181588|20181588|20181588|20182036|20182036|20182036|20181741|20181741|20181741 20182337|20182337|20182337|20182337|20182337|20182337|20182337|20182337|20182337 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 20182224 20182250 3'utr Sdic2 FlyBase G52087.1 TTGTATCTTTTGTGATCCCGCTACTGT 6 20182242 0.677388768 2 6 60 1 1.041392685 0.181818182 0.833333333 0.909090909 6 0 0 11 X:20182224-20182250 6 8.5 4879 FBgn0053497 6.756666667 0.41 0.633333333 1.258016774 20.73170732 13.42105263 1 2 1.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 20228616 20228621 - X_20228616_20228621_- 0.99999952 0.999999358 0.999999439 7.07E-08 sw FBtr0089402|FBtr0089402|FBtr0089402|FBtr0340361|FBtr0340361|FBtr0340361|FBtr0089397|FBtr0089397|FBtr0089397|FBtr0089409|FBtr0089409|FBtr0089409|FBtr0089399|FBtr0089399|FBtr0089399|FBtr0089403|FBtr0089403|FBtr0089403|FBtr0089407|FBtr0089407|FBtr0089407|FBtr0089408|FBtr0089408|FBtr0089408|FBtr0089398|FBtr0089398|FBtr0089398|FBtr0089401|FBtr0089401|FBtr0089401|FBtr0089400|FBtr0089400|FBtr0089400|FBtr0089404|FBtr0089404|FBtr0089404|FBtr0089406|FBtr0089406|FBtr0089406|FBtr0340360|FBtr0340360|FBtr0340360|FBtr0089405|FBtr0089405|FBtr0089405 20227959|20227959|20227959|20227959|20227959|20227959|20228122|20228122|20228122|20228122|20228122|20228122|20227959|20227959|20227959|20227959|20227959|20227959|20228122|20228122|20228122|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20228122|20228122|20228122|20228122|20228122|20228122|20227959|20227959|20227959|20228122|20228122|20228122 20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718 X - 20228606 20228632 3'utr sw FlyBase G69279.1 TTTGTATCTTTTGTGATCCCGCTACTG 7 20228622 0.655741663 2 6 62 0.875 0.84509804 0.375 0.142857143 0.25 7 1 0 7 X:20228606-20228632 6 sw FBtr0089403|FBtr0089403|FBtr0089403|FBtr0089404|FBtr0089404|FBtr0089404|FBtr0089407|FBtr0089407|FBtr0089407|FBtr0340360|FBtr0340360|FBtr0340360|FBtr0089402|FBtr0089402|FBtr0089402|FBtr0340361|FBtr0340361|FBtr0340361|FBtr0089408|FBtr0089408|FBtr0089408|FBtr0089409|FBtr0089409|FBtr0089409|FBtr0089399|FBtr0089399|FBtr0089399|FBtr0089401|FBtr0089401|FBtr0089401|FBtr0089406|FBtr0089406|FBtr0089406|FBtr0089405|FBtr0089405|FBtr0089405|FBtr0089398|FBtr0089398|FBtr0089398|FBtr0089400|FBtr0089400|FBtr0089400|FBtr0089397|FBtr0089397|FBtr0089397 20227959|20227959|20227959|20228122|20228122|20228122|20228122|20228122|20228122|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20228122|20228122|20228122|20227959|20227959|20227959|20227959|20227959|20227959|20228122|20228122|20228122|20228122|20228122|20228122|20227959|20227959|20227959|20227959|20227959|20227959|20228122|20228122|20228122 20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 20228608 20228632 3'utr sw FlyBase G52093.1 TTTGTATCTTTTGTGATCCCGCTAC 7 20228622 0.694488948 2 6 61 0.9 0.954242509 0.2 0.285714286 0.5 7 1 0 9 X:20228608-20228632 6 7 4880 FBgn0003654 899.0166667 37.47 57.48333333 0.007786285 0.18681612 0.121774427 1 1 1 0.1 dme-miR-33-5p 6mer2-7 AATGCA X 2023105 2023110 + X_2023105_2023110_+ 0.999053113 0.999757308 0.99940521 0.000497945 east FBtr0307290 2022463 2024647 X + 2023082 2023135 3'utr east FlyBase G58174.1 ACACACAAAGTAATTTAAGAGAGAATGCAGCACAAAAAAATTGAGGCCAAGATT 17 2023107 0.933858758 3 16 38 0.947368421 1.255272505 0.052631579 0.117647059 0.210526316 17 1 0 18 X:2023082-2023135 6 east FBtr0307290 2022463 2024647 AATGCA 6mer2-7 dme-miR-33-5p X + 2023086 2023122 3'utr east FlyBase G44003.1 ACAAAGTAATTTAAGAGAGAATGCAGCACAAAAAAAT 9 2023107 0.894543098 3 9 25 1 1.204119983 0 0.555555556 0.75 9 0 0 16 X:2023086-2023122 6 13 4881 FBgn0261954 4706.666667 61.14 94.46 0.00276204 0.212626758 0.137624391 -2 -2 -2 0.1 dme-miR-1003-3p 6mer2-7 TGTGAG X 2023537 2023542 + X_2023537_2023542_+ 0.999130287 0.999999998 0.999565142 0.000614971 east FBtr0307290 2022463 2024647 X + 2023518 2023609 3'utr east FlyBase G58176.1 GCTTAAGAAGAAACGCGATTGTGAGCCACAAGCAATCAAATTGATCGATGTTCTCGGTGCCTCTGGTGGCCTATGTTCCATTCCAAGGAATT 20 2023566 0.976971292 8 20 130 1 1.397940009 0.28 0.25 0.4 20 0 0 25 X:2023518-2023609 6 east FBtr0307290 2022463 2024647 TGTGAG 6mer2-7 dme-miR-1003-3p X + 2023522 2023588 3'utr east FlyBase G44005.1 AAGAAGAAACGCGATTGTGAGCCACAAGCAATCAAATTGATCGATGTTCTCGGTGCCTCTGGTGGCC 15 2023566 0.981676713 6 13 91 0.931034483 1.431363764 0.310344828 0.466666667 0.724137931 15 2 0 27 X:2023522-2023588 6 4 4882 FBgn0261954 4706.666667 61.14 94.46 0.000849858 0.065423618 0.042345967 -29 -29 -29 0.1 dme-miR-14-3p 6mer3-8 AAGACT X 20248355 20248360 - X_20248355_20248360_- 0.999999999 1 1 0 CG17068 FBtr0077341 20248307 20248868 X - 20248345 20248371 3'utr CG17068 FlyBase G69281.1 AAGATTTACACAAGACTAAATTGGTAT 13 20248366 0.585355024 4 13 69 1 1.230448921 0.058823529 0.307692308 0.470588235 13 0 0 17 X:20248345-20248371 6 CG17068 FBtr0077341 20248307 20248868 AAGACT 6mer3-8 dme-miR-14-3p X - 20248341 20248376 3'utr CG17068 FlyBase G52095.1 ATTTTAAGATTTACACAAGACTAAATTGGTATATTT 9 20248367 0.766538447 3 8 54 0.916666667 1.041392685 0.083333333 0.222222222 0.416666667 9 1 0 11 X:20248341-20248376 6 11 4883 FBgn0031098 134.3766667 5.846666667 8.906666667 0.08185945 1.881413911 1.23502994 6 7 6.5 0.1 dme-miR-184-3p 6mer3-8 TCCGTC X 2025349 2025354 - X_2025349_2025354_- 0.999995971 0.999996063 0.999996017 7.07E-08 Actn FBtr0070343|FBtr0310659|FBtr0310657|FBtr0070345|FBtr0070344|FBtr0310658|FBtr0333802|FBtr0333801|FBtr0303048 2025114|2025114|2024754|2023820|2025114|2025114|2025114|2025114|2025114 2025540|2025540|2025540|2025540|2025540|2025540|2025540|2025540|2025540 X - 2025316 2025364 3'utr Actn FlyBase G64175.1 TTTATTAATTTCCGTCTCGAGCCGATGTATGCGACCCACACATACAAAA 9 2025355 0.98348232 3 9 72 1 0.954242509 0 0 0 9 0 0 9 X:2025316-2025364 6 Actn FBtr0310658|FBtr0333802|FBtr0333801|FBtr0303048|FBtr0070343|FBtr0310657|FBtr0310659|FBtr0070345|FBtr0070344 2025114|2025114|2025114|2025114|2025114|2024754|2025114|2023820|2025114 2025540|2025540|2025540|2025540|2025540|2025540|2025540|2025540|2025540 TCCGTC 6mer3-8 dme-miR-184-3p X - 2025336 2025363 3'utr Actn FlyBase G48376.1 TTATTAATTTCCGTCTCGAGCCGATGTA 9 2025355 0.706860117 2 9 67 1 1.113943352 0 0.222222222 0.461538462 9 0 0 13 X:2025336-2025363 6 9 4884 FBgn0000667 602.5766667 20.25333333 31.07 0.014935859 0.444371297 0.289668491 1 1 1 0.1 dme-miR-79-3p 6mer3-8 TAGCTT X 20254015 20254020 + X_20254015_20254020_+ 0.52193613 0.969399129 0.745667629 0.316404122 Rab10 FBtr0077337 20253262 20254691 X + 20253901 20254037 3'utr Rab10 FlyBase G63216.1 GCACTCCCCAGCCGCCCCACTTAGTGTTTCGTTTTTGTTTTGCGTTTCAGCCTAGATATAAATAACACCTATACATATTATACATCGGATAGTAGTATATAGCCTATACCTACTTAGCTTGCTTTCGCTTTCTATGT 27 20254014 0.989341826 14 26 254 0.96875 1.491361694 0.1875 0.185185185 0.3125 27 1 0 31 X:20253901-20254037 6 Rab10 FBtr0077337 20253262 20254691 TAGCTT 6mer3-8 dme-miR-79-3p X + 20254000 20254033 3'utr Rab10 FlyBase G47668.1 TAGCCTATACCTACTTAGCTTGCTTTCGCTTTCT 7 20254014 0.72095455 4 6 59 0.866666667 1.113943352 0 0.571428571 0.8 7 2 0 13 X:20254000-20254033 6 8 4885 FBgn0015789 1230.126667 63.84666667 97.75 0.006503395 0.125300198 0.081841432 1 1 1 0.1 dme-bantam-3p 6mer3-8 TGATCT X 2039002 2039007 - X_2039002_2039007_- 0.999995613 0.99999617 0.999995892 4.24E-07 usp FBtr0070346|FBtr0333803 2038796|2038796 2039386|2039386 X - 2038981 2039033 5'utr usp FlyBase G64186.1 TAACGGTTAAAATTAATGCATAGTTATGATCTACAGACGTATGTAAACATACA 85 2039007 0.722550715 5 80 571 0.923809524 1.986771734 0.19047619 0.188235294 0.342857143 85 8 0 97 X:2038981-2039033 6 usp FBtr0070346|FBtr0333803 2038796|2038796 2039386|2039386 TGATCT 6mer3-8 dme-bantam-3p X - 2038982 2039029 5'utr usp FlyBase G48383.1 GGTTAAAATTAATGCATAGTTATGATCTACAGACGTATGTAAACATAC 44 2039007 0.707469333 4 42 273 0.971428571 1.832508913 0.357142857 0.340909091 0.585714286 44 2 0 68 X:2038982-2039029 6 63.5 4886 FBgn0003964 1386.533333 66.48333333 101.85 0.045797673 0.955126598 0.623465881 0 0 0 0.1 dme-miR-2b-2-5p 6mer2-7 TGAAGA X 2039181 2039186 - X_2039181_2039186_- 0.786372557 0.954836941 0.870604749 0.119122249 usp FBtr0070346|FBtr0333803 2038796|2038796 2039386|2039386 X - 2039153 2039235 5'utr usp FlyBase G64187.1 TTACCTAATATTATTATTATTATTGATATAGAAAATGTTTTCCTTAAGATGAAGATTAGCCTCCTCGACGTTTATGTCCCAGT 17 2039179 0.978331753 6 16 117 0.95 1.278753601 0.3 0.176470588 0.3 17 1 0 19 X:2039153-2039235 6 usp FBtr0070346|FBtr0333803 2038796|2038796 2039386|2039386 TGAAGA 6mer2-7 dme-miR-2b-2-5p X - 2039146 2039190 5'utr usp FlyBase G48384.1 AAGATGAAGATTAGCCTCCTCGACGTTTATGTCCCAGTAAACGAA 16 2039180 0.977783701 3 14 78 0.961538462 1.397940009 0.153846154 0.25 0.538461538 16 1 0 25 X:2039146-2039190 6 14.5 4887 FBgn0003964 1386.533333 66.48333333 101.85 0.010457736 0.218099774 0.142366225 -7 -6 -6.5 0.1 dme-miR-308-3p 7mer-m1 TGTGATT X 2039331 2039337 - X_2039331_2039337_- 0.521106779 0.519441548 0.520274164 0.001177545 usp FBtr0070346|FBtr0333803 2038796|2038796 2039386|2039386 X - 2039291 2039360 5'utr usp FlyBase G64188.1 TCTCCATCCGAAAAATGTTTCATTGTGATTGCGTTTGTTTGCATTTCTCCTCTCTATCCCTTATACCCTA 295 2039338 0.629756868 17 277 3251 0.938172043 1.542825427 0.206989247 0.210169492 0.373655914 295 14 9 349 X:2039291-2039360 7 usp FBtr0070346|FBtr0333803 2038796|2038796 2039386|2039386 TGTGATT 7mer-m1 dme-miR-308-3p X - 2039295 2039356 5'utr usp FlyBase G48385.1 CATCCGAAAAATGTTTCATTGTGATTGCGTTTGTTTGCATTTCTCCTCTCTATCCCTTATAC 199 2039332 0.691215852 11 191 2120 0.969798658 1.682746592 0.241610738 0.346733668 0.563758389 199 4 5 289 X:2039295-2039356 7 210.5 4888 FBgn0003964 1386.533333 66.48333333 101.85 0.151817482 3.166207069 2.06676485 1 -5 -2 0.1 dme-miR-283-5p 7mer-m1 GATATTT X 20421328 20421334 - X_20421328_20421334_- 0.765586661 0.765586663 0.765586662 0 Pp4-19C FBtr0346620|FBtr0077324|FBtr0345017|FBtr0340403|FBtr0077325 20421085|20421085|20421085|20421085|20421085 20421864|20421864|20421864|20421864|20421864 X - 20421290 20421359 3'utr Pp4-19C FlyBase G69291.1 ACTAGGAGCCCAAGTTGAGCAAATAGATATTTTTACCGACAGATTGCGTTAAGTCGGCTAAGCTAGGACA 11 20421345 0.97456021 5 10 63 0.916666667 1.041392685 0.25 0.090909091 0.166666667 11 1 0 11 X:20421290-20421359 7 Pp4-19C FBtr0340403|FBtr0345017|FBtr0077324|FBtr0346620|FBtr0077325 20421085|20421085|20421085|20421085|20421085 20421864|20421864|20421864|20421864|20421864 GATATTT 7mer-m1 dme-miR-283-5p X - 20421300 20421362 3'utr Pp4-19C FlyBase G52103.1 TATACTAGGAGCCCAAGTTGAGCAAATAGATATTTTTACCGACAGATTGCGTTAAGTCGGCTA 15 20421345 0.977233831 6 13 88 0.916666667 1.342422681 0.125 0.466666667 0.666666667 15 2 0 22 X:20421300-20421362 7 8 4889 FBgn0023177 682.52 42.84666667 65.32666667 0.011721268 0.186712307 0.122461476 11 11 11 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA X 20426559 20426566 - X_20426559_20426566_- 0.650116478 0.64927723 0.649696854 0.000593475 CG15456 FBtr0077323|FBtr0077323|FBtr0077323 20426507|20426507|20426507 20426645|20426645|20426645 X - 20426541 20426608 3'utr CG15456 FlyBase G69304.1 GCTTCACGCTTACACCAACATTTGTGGAACCCATTTGAAATCCTGTGATATATGGTATATACATATAT 39 20426568 0.815469078 8 34 326 0.88372093 1.102662342 0.186046512 0.102564103 0.186046512 39 3 2 38 X:20426541-20426608 8 CG15456 FBtr0077323|FBtr0077323|FBtr0077323 20426507|20426507|20426507 20426645|20426645|20426645 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 20426531 20426602 3'utr CG15456 FlyBase G52110.1 CGCTTACACCAACATTTGTGGAACCCATTTGAAATCCTGTGATATATGGTATATACATATATAATAATAAAT 24 20426568 0.964384997 10 23 201 1 1.568201724 0.162162162 0.333333333 0.567567568 24 0 0 37 X:20426531-20426602 8 27 4890 FBgn0040650 15.33333333 4.38 6.593333333 1.760869565 6.164383562 4.095045501 2 2 2 0.1 dme-miR-14-3p 6mer2-7 AGACTG X 20426622 20426627 - X_20426622_20426627_- 0.829992512 0.775825676 0.802909094 0.038301712 CG15456 FBtr0077323 20426507 20426645 X - 20426615 20426665 stop_codon CG15456 FlyBase G69305.1 AGGACTGCGTCGTGATGTGATCTCCTACTTTCACGCCTAGACTGTTTAAAC 24 20426636 0.780972529 9 24 179 1 1.462397998 0.206896552 0.166666667 0.310344828 24 0 0 29 X:20426615-20426665 6 CG15456 FBtr0077323 20426507 20426645 AGACTG 6mer2-7 dme-miR-14-3p X - 20426614 20426666 stop_codon CG15456 FlyBase G52111.1 AAGGACTGCGTCGTGATGTGATCTCCTACTTTCACGCCTAGACTGTTTAAACA 11 20426636 0.770090259 4 10 88 0.941176471 0.903089987 0.352941176 0.363636364 0.588235294 11 0 1 16 X:20426614-20426666 6 5.5 4891 FBgn0040650 15.33333333 4.38 6.593333333 0.358695652 1.255707763 0.834175935 9 9 9 0.1 dme-miR-965-3p 7mer-A1 ACGCTTA X 2044559 2044565 - X_2044559_2044565_- 0.820040814 0.819077786 0.8195593 0.000680944 moody FBtr0310289|FBtr0303044|FBtr0303045|FBtr0303043|FBtr0070341|FBtr0310288 2044290|2044290|2044290|2044290|2044290|2044290 2045134|2045243|2045243|2045134|2045134|2045134 X - 2044517 2044622 3'utr moody FlyBase G64199.1 CATACACATGTTACACTACTTAGTAATAGTTTAGTTCGTAAATATTTATGGTCGCTCACGCTTAGTATTAACCCCTTTTCTTTCTACCTTATATGCTAACTTCTAC 32 2044574 0.984574742 8 29 330 0.897435897 1.544068044 0.076923077 0.1875 0.333333333 32 4 0 35 X:2044517-2044622 7 moody FBtr0310288|FBtr0070341|FBtr0303043|FBtr0303045|FBtr0303044|FBtr0310289 2044290|2044290|2044290|2044290|2044290|2044290 2045134|2045134|2045134|2045243|2045243|2045134 ACGCTTA 7mer-A1 dme-miR-965-3p X - 2044544 2044620 3'utr moody FlyBase G48395.1 TACACATGTTACACTACTTAGTAATAGTTTAGTTCGTAAATATTTATGGTCGCTCACGCTTAGTATTAACCCCTTTT 16 2044574 0.989067906 8 16 150 1 1.301029996 0.05 0.1875 0.35 16 0 0 20 X:2044544-2044620 7 13 4892 FBgn0025631 754.5733333 24.87333333 38.48333333 0.017228279 0.522648084 0.337808575 9 9 9 0.1 dme-miR-970-3p 6mer3-8 TCTTAT X 2044677 2044682 - X_2044677_2044682_- 0.990779388 0.98680982 0.988794604 0.002806931 moody FBtr0310289|FBtr0303044|FBtr0303045|FBtr0303043|FBtr0070341|FBtr0310288 2044290|2044290|2044290|2044290|2044290|2044290 2045134|2045243|2045243|2045134|2045134|2045134 X - 2044627 2044718 3'utr moody FlyBase G64200.1 TACTTTTGAGTGCCCCTCTACTTTTCGCCCTAATATTCTTATTCCGCCCTATATTGCATAAGCCTAAGCCTGGATTTTTAATAAGCCCCCAA 210 2044677 0.980373074 18 199 2026 0.951612903 2.071882007 0.032258065 0.166666667 0.294354839 210 11 1 236 X:2044627-2044718 6 moody FBtr0310288|FBtr0070341|FBtr0303043|FBtr0303045|FBtr0303044|FBtr0310289 2044290|2044290|2044290|2044290|2044290|2044290 2045134|2045134|2045134|2045243|2045243|2045134 TCTTAT 6mer3-8 dme-miR-970-3p X - 2044637 2044716 3'utr moody FlyBase G48396.1 CTTTTGAGTGCCCCTCTACTTTTCGCCCTAATATTCTTATTCCGCCCTATATTGCATAAGCCTAAGCCTGGATTTTTAAT 84 2044677 0.829919569 11 79 737 0.944 1.770852012 0.008 0.345238095 0.56 84 6 1 118 X:2044637-2044716 6 129.5 4893 FBgn0025631 754.5733333 24.87333333 38.48333333 0.171620165 5.206378987 3.365093114 -5 -5 -5 0.1 dme-miR-932-5p 7mer-m8 GGAATTG X 2045050 2045056 - X_2045050_2045056_- 0.66329391 0.697080335 0.680187123 0.023890593 moody FBtr0310289|FBtr0303044|FBtr0303045|FBtr0303043|FBtr0070341|FBtr0310288 2044290|2044290|2044290|2044290|2044290|2044290 2045134|2045243|2045243|2045134|2045134|2045134 X - 2045035 2045077 3'utr moody FlyBase G64202.1 GTTATGAACACAAAATTGCCAGGAATTGTAGATCGGGATATAG 48 2045062 0.836356185 4 44 225 0.929824561 1.72427587 0.157894737 0.145833333 0.280701754 48 4 0 53 X:2045035-2045077 7 moody FBtr0310288|FBtr0070341|FBtr0303043|FBtr0303045|FBtr0303044|FBtr0310289 2044290|2044290|2044290|2044290|2044290|2044290 2045134|2045134|2045134|2045243|2045243|2045134 GGAATTG 7mer-m8 dme-miR-932-5p X - 2045041 2045087 3'utr moody FlyBase G48398.1 TGCTACCTTCGTTATGAACACAAAATTGCCAGGAATTGTAGATCGGG 34 2045062 0.790474676 5 32 155 0.914893617 1.633468456 0.085106383 0.323529412 0.510638298 34 4 0 43 X:2045041-2045087 7 39 4894 FBgn0025631 754.5733333 24.87333333 38.48333333 0.051684837 1.567944251 1.013425725 6 6 6 0.1 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT X 20470493 20470499 - X_20470493_20470499_- 0.620200764 0.620203806 0.620202285 2.12E-06 RhoGAP19D FBtr0304906|FBtr0301537|FBtr0340405|FBtr0345015 20469953|20469953|20469953|20469953 20472033|20472033|20472033|20472033 X - 20470483 20470510 3'utr RhoGAP19D FlyBase G69309.1 TATTTGGAGAATGGTGCTGGCGGAAATG 13 20470499 0.818407676 3 12 53 1 1.176091259 0.066666667 0.153846154 0.266666667 13 0 0 15 X:20470483-20470510 7 RhoGAP19D FBtr0345015|FBtr0340405|FBtr0301537|FBtr0304906 20469953|20469953|20469953|20469953 20472033|20472033|20472033|20472033 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" X - 20470456 20470518 3'utr RhoGAP19D FlyBase G52113.1 GTATTATTTATTTGGAGAATGGTGCTGGCGGAAATGCATGATATAGGTGCAGCTACAAAGCTA 9 20470499 0.962620947 5 9 50 1 1.113943352 0.153846154 0.333333333 0.538461538 9 0 0 13 X:20470456-20470518 7 9.5 4895 FBgn0031118 1322.826667 17.35333333 26.62 0.007181591 0.547445255 0.35687453 0 0 0 0.1 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG X 20470644 20470650 - X_20470644_20470650_- 0.700944349 0.702072821 0.701508585 0.00079797 RhoGAP19D FBtr0304906|FBtr0301537|FBtr0340405|FBtr0345015 20469953|20469953|20469953|20469953 20472033|20472033|20472033|20472033 X - 20470633 20470673 3'utr RhoGAP19D FlyBase G69311.1 TTTCTTTTCTTCTTTGTACCTCTGTACCTGTTGTACAAAAA 31 20470651 0.802699252 4 31 287 1 1.62324929 0.285714286 0.193548387 0.404761905 31 0 0 42 X:20470633-20470673 7 RhoGAP19D FBtr0345015|FBtr0340405|FBtr0301537|FBtr0304906 20469953|20469953|20469953|20469953 20472033|20472033|20472033|20472033 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" X - 20470635 20470662 3'utr RhoGAP19D FlyBase G52114.1 CTTTGTACCTCTGTACCTGTTGTACAAA 18 20470651 0.786797628 2 18 142 1 1.342422681 0.227272727 0.222222222 0.363636364 18 0 0 22 X:20470635-20470662 7 24.5 4896 FBgn0031118 1322.826667 17.35333333 26.62 0.018520945 1.411832501 0.920360631 1 1 1 0.1 dme-miR-11-3p 7mer-m1 TGTGATG X 20514947 20514953 + X_20514947_20514953_+ 0.610870833 0.611373423 0.611122128 0.000355392 CG1812 FBtr0077312 20514813 20515828 X + 20514910 20514975 3'utr CG1812 FlyBase G63274.1 TGTGTAGCTAGCGTAGACCTATGTACATGCGAGATTTTGTGATGACTGCAGTAACGAAAATGTGCC 28 20514946 0.981450366 8 26 186 0.945945946 1.243038049 0.297297297 0.214285714 0.405405405 28 1 1 35 X:20514910-20514975 7 CG1812 FBtr0077312 20514813 20515828 TGTGATG 7mer-m1 dme-miR-11-3p X + 20514911 20514965 3'utr CG1812 FlyBase G47706.1 GTGTAGCTAGCGTAGACCTATGTACATGCGAGATTTTGTGATGACTGCAGTAACG 18 20514946 0.980803042 6 18 128 1 1.380211242 0.458333333 0.222222222 0.416666667 18 0 0 24 X:20514911-20514965 7 19.5 4897 FBgn0031119 225 8.363333333 12.75 0.086666667 2.331606218 1.529411765 1 1 1 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA X 20515531 20515538 + X_20515531_20515538_+ 0.500118927 0.500118119 0.500118523 5.66E-07 CG1812 FBtr0077312 20514813 20515828 X + 20515506 20515560 3'utr CG1812 FlyBase G63277.1 ATAGAGTGTAAAATATGTAGAACATGTACTTAATTTGTATAAACTAGAAAAAGTT 57 20515530 0.895044842 5 56 521 0.984615385 1.806179974 0.246153846 0.122807018 0.230769231 57 1 0 64 X:20515506-20515560 8 CG1812 FBtr0077312 20514813 20515828 GTACTTAA 8mer-A1 dme-miR-252-5p X + 20515509 20515556 3'utr CG1812 FlyBase G47708.1 GAGTGTAAAATATGTAGAACATGTACTTAATTTGTATAAACTAGAAAA 47 20515530 0.886382602 4 47 406 1 1.84509804 0.157142857 0.382978723 0.585714286 47 0 0 70 X:20515509-20515556 8 51.5 4898 FBgn0031119 225 8.363333333 12.75 0.228888889 6.157831806 4.039215686 1 1 1 0.1 dme-miR-986-5p 6mer2-7 TTCGAG X 20515965 20515970 - X_20515965_20515970_- 0.999999897 0.999998907 0.999999402 7.07E-07 Tak1 FBtr0077319|FBtr0340404 20515906|20515906 20516300|20516300 X - 20515922 20515998 3'utr Tak1 FlyBase G69331.1 ACACACTTAGCATTAGCACATGTATCTGTTCGAGGAAGCTGACAAGGAGTAGACCAAAAAAATATAAAAACCATCGA 77 20515978 0.983729794 9 77 590 1 1.963787827 0.043478261 0.181818182 0.315217391 77 0 0 92 X:20515922-20515998 6 Tak1 FBtr0077319|FBtr0340404 20515906|20515906 20516300|20516300 TTCGAG 6mer2-7 dme-miR-986-5p X - 20515928 20516000 3'utr Tak1 FlyBase G52125.1 AAACACACTTAGCATTAGCACATGTATCTGTTCGAGGAAGCTGACAAGGAGTAGACCAAAAAAATATAAAAAC 53 20515978 0.982303798 6 53 396 1 1.892094603 0.076923077 0.377358491 0.576923077 53 0 0 78 X:20515928-20516000 6 61.5 4899 FBgn0026323 737.6966667 30.11333333 45.87333333 0.083367599 2.042284702 1.340648162 8 8 8 0.1 dme-miR-970-3p 6mer3-8 TCTTAT X 20516257 20516262 - X_20516257_20516262_- 0.99995038 0.998968944 0.999459662 0.000694025 Tak1 FBtr0077319|FBtr0340404 20515906|20515906 20516300|20516300 X - 20516244 20516309 stop_codon Tak1 FlyBase G69333.1 AATGCGTAGTCTCGTGCGCTGCCGATTCGATCGATCGACTCTCTATGTCTTATAGGCTAGTACTCT 9 20516260 0.758871517 9 9 72 1 1 0.4 0.111111111 0.2 9 0 0 10 X:20516244-20516309 6 Tak1 FBtr0077319|FBtr0340404 20515906|20515906 20516300|20516300 TCTTAT 6mer3-8 dme-miR-970-3p X - 20516243 20516307 stop_codon Tak1 FlyBase G52127.1 TGCGTAGTCTCGTGCGCTGCCGATTCGATCGATCGACTCTCTATGTCTTATAGGCTAGTACTCTA 11 20516290 0.810567704 6 10 83 0.875 1.322219295 0.333333333 0.727272727 0.875 11 3 0 21 X:20516243-20516307 6 5 4900 FBgn0026323 737.6966667 30.11333333 45.87333333 0.006777854 0.166039407 0.108995785 -2 28 13 0.1 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 2055118 2055125 + X_2055118_2055125_+ 0.631136628 0.631136596 0.631136612 0 CG4313 FBtr0340109|FBtr0340108|FBtr0340107 2054944|2054944|2054944 2055414|2055414|2055414 X + 2055099 2055148 3'utr CG4313 FlyBase G58179.1 AGTGCCTCCAAAAAAGATTTCTAGTCACATGATCCGGCCGGTCGTCCCTT 14 2055117 0.976627208 4 13 87 0.882352941 1.176091259 0.235294118 0.142857143 0.294117647 14 2 0 15 X:2055099-2055148 8 CG4313 FBtr0340107|FBtr0340109|FBtr0340108 2054944|2054944|2054944 2055414|2055414|2055414 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X + 2055097 2055132 3'utr CG4313 FlyBase G44006.1 ATAGTGCCTCCAAAAAAGATTTCTAGTCACATGATC 8 2055117 0.978349085 2 6 35 0.777777778 0.84509804 0.222222222 0.125 0.222222222 8 2 0 7 X:2055097-2055132 8 9.5 4901 FBgn0025632 50.11333333 3.046666667 4.636666667 0.189570307 3.118161926 2.048885694 1 1 1 0.1 dme-miR-184-3p 6mer3-8 TCCGTC X 21038831 21038836 + X_21038831_21038836_+ 0.919517027 0.906940612 0.91322882 0.008892858 Ntf-2 FBtr0113007 21037719 21039543 X + 21038792 21038918 stop_codon Ntf-2 FlyBase G63291.1 AGGCCAACGCAGGCACCTTCTTTGTGGCCCACGACATCTTCCGTCTCAACATCCACAACTCTGCCTAGGAGCACTCCACTTACCTACGTATGCACACCACTCAGCACCACACATAATCGACATCCAA 191 21038830 0.9685458 13 184 1017 0.960352423 1.736396502 0.035242291 0.162303665 0.295154185 191 6 3 218 X:21038792-21038918 6 Ntf-2 FBtr0113007 21037719 21039543 TCCGTC 6mer3-8 dme-miR-184-3p X + 21038811 21038964 stop_codon Ntf-2 FlyBase G47722.1 CTTTGTGGCCCACGACATCTTCCGTCTCAACATCCACAACTCTGCCTAGGAGCACTCCACTTACCTACGTATGCACACCACTCAGCACCACACATAATCGACATCCAAAGATGCCCAGCGCCAGATGATAACAACAAGCTCGGCAGTGGAACTC 110 21038830 0.864498965 14 107 519 0.962566845 1.77815125 0.096256684 0.445454545 0.673796791 110 5 2 180 X:21038811-21038964 6 123.5 4902 FBgn0031145 2698.153333 430.73 661.49 0.045772047 0.286722541 0.186699723 1 1 1 0.1 dme-miR-1006-3p 7mer-m8 CGAATTT X 21039229 21039235 + X_21039229_21039235_+ 0.553959341 0.636412273 0.595185807 0.058303075 Ntf-2 FBtr0333760|FBtr0113007|FBtr0333762 21038858|21037719|21038858 21039543|21039543|21041467 X + 21039221 21039276 3'utr Ntf-2 FlyBase G63295.1 AGGACTATCGAATTTGGTGGTATGTGCCGTGCTACAAGCTCGTATTTCGAATTCCC 9 21039235 0.92334403 7 9 60 1 1.079181246 0.5 0.333333333 0.5 9 0 0 12 X:21039221-21039276 7 Ntf-2 FBtr0333762|FBtr0113007|FBtr0333760 21038858|21037719|21038858 21041467|21039543|21039543 CGAATTT 7mer-m8 dme-miR-1006-3p X + 21039197 21039251 3'utr Ntf-2 FlyBase G47725.1 TGGATCTCGCGATCTAATTTAGCTAGGACTATCGAATTTGGTGGTATGTGCCGTG 13 21039229 0.976713341 6 12 100 0.941176471 1.204119983 0.705882353 0.230769231 0.411764706 13 1 0 16 X:21039197-21039251 7 7.5 4903 FBgn0031145 2698.153333 430.73 661.49 0.002779679 0.0174123 0.01133804 -6 0 -3 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC X 21050232 21050238 - X_21050232_21050238_- 0.661615645 0.661615645 0.661615645 0 CG1518 FBtr0345923|FBtr0077264 21049883|21049962 21050270|21050270 X - 21050109 21050316 stop_codon CG1518 FlyBase G69358.1 GGTGCGCATCTACAAGGTTAAGGATCTGCCGAATCGTGGAGTCTGAGAAATAAGTGTCGCAGTCATTCCGCTCTATTCTGTGTTCTGTACATTAGCTAACTCTGCCCGTCTCCCTCTATCTCGAATATTTGGCAATCTCTCTCGCTCTATGAGCACCAATTGCTGCATTCTCCTGCTTTGCCCATCATGCATTTAGTTCTACACTGGC 211 21050240 0.896288387 34 202 1959 0.957198444 2.390935107 0.13618677 0.184834123 0.3307393 211 11 0 246 X:21050109-21050316 7 CG1518 FBtr0345923|FBtr0077264 21049883|21049962 21050270|21050270 TGTGTTC 7mer-m8 dme-miR-317-3p X - 21050081 21050382 stop_codon CG1518 FlyBase G52149.1 CGAGATCGGCAACAAGGACTTTGAACTGGATGTCATGGAGGAGGCGTACACCACGGAGCACTGGCTGGTGCGCATCTACAAGGTTAAGGATCTGCCGAATCGTGGAGTCTGAGAAATAAGTGTCGCAGTCATTCCGCTCTATTCTGTGTTCTGTACATTAGCTAACTCTGCCCGTCTCCCTCTATCTCGAATATTTGGCAATCTCTCTCGCTCTATGAGCACCAATTGCTGCATTCTCCTGCTTTGCCCATCATGCATTTAGTTCTACACTGGCACAAAACCACAAAAACCAAGTATTTTTT 155 21050240 0.987604808 37 145 1296 0.94092827 1.503206823 0.126582278 0.35483871 0.578059072 155 8 6 223 X:21050081-21050382 7 92.5 4904 FBgn0031149 1278.48 56.59333333 86.55 0.072351542 1.634468135 1.068746389 2 2 2 0.1 dme-miR-283-5p 7mer-A1 GATATTA X 21062460 21062466 - X_21062460_21062466_- 0.782911824 0.782881582 0.782896703 2.14E-05 CG32512 FBtr0077262|FBtr0340438|FBtr0332848|FBtr0332847 21062382|21062275|21062382|21062420 21062966|21062966|21062966|21062966 X - 21062435 21062480 3'utr CG32512 FlyBase G69374.1 CTGTTTTAAGTGCGGATATTAAGTGAATGTAATTTATATTAAAACA 5 21062470 0.99287912 4 4 41 0.625 0.698970004 0 0.4 0.625 5 3 0 5 X:21062435-21062480 7 CG32512 FBtr0332847|FBtr0332848|FBtr0340438|FBtr0077262 21062420|21062382|21062275|21062382 21062966|21062966|21062966|21062966 GATATTA 7mer-A1 dme-miR-283-5p X - 21062441 21062517 3'utr CG32512 FlyBase G52164.1 CTGTTATTTATTAATCCACCGAAAACTATGTTTTTCTCTGTTTTAAGTGCGGATATTAAGTGAATGTAATTTATATT 14 21062453 0.848484342 9 13 131 0.9 1.255272505 0.25 0.428571429 0.6 14 2 0 18 X:21062441-21062517 7 4.5 4905 FBgn0052512 150.89 8.04 12.13666667 0.02982305 0.559701493 0.370777259 4 -13 -4.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA X 21062678 21062685 - X_21062678_21062685_- 0.650152829 0.650156365 0.650154597 2.55E-06 CG32512 FBtr0077262|FBtr0077262|FBtr0077262|FBtr0340438|FBtr0340438|FBtr0340438|FBtr0332848|FBtr0332848|FBtr0332848|FBtr0332847|FBtr0332847|FBtr0332847 21062382|21062382|21062382|21062275|21062275|21062275|21062382|21062382|21062382|21062420|21062420|21062420 21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966 X - 21062595 21063085 stop_codon CG32512 FlyBase G69375.1 AGCGCATCCACAAGGGATTCCGGCGCATTCACATGACCATCGCCATTGGCAATATGACGGTCATGCTGACCACCTGCCTGCAGCTGTATTTTCTGGCATCGAAAATACGCCTTAGCTAAGGCAAGCCCGAAGTGAAGAATTTATAGATTTAGGTATCCACCACATAACAACGCATACACACACACACACATTACTACTACTGTACGTTCCACGTTCGATAAATGTCTCAAATTCAAATATGGCTTATTGAACACTTGAGTTTTTGAACTGGTCCTCCATCCGGCCCCAAATGCCCTTCCTCCGCCCCACACACGCCCACACCACCCATACGCCCATGCACGAAAATATTTAATTTCTCCCAAGGACGCCTTGTTTGCGACGACCTTTCCAATCTGATTTCCTGTGATAAACTCAGCCCAAAACTCCCAAAACAAAACACCCACCCGCAAACCACAGCACATTTAGCCTAGAGTTGATAGCCAATAATTTAC 887 21062688 0.984465956 77 817 6566 0.924783028 1.867875255 0.107039537 0.145434047 0.269045323 887 66 12 959 X:21062595-21063085 8 CG32512 FBtr0332847|FBtr0332847|FBtr0332847|FBtr0332848|FBtr0332848|FBtr0332848|FBtr0340438|FBtr0340438|FBtr0340438|FBtr0077262|FBtr0077262|FBtr0077262 21062420|21062420|21062420|21062382|21062382|21062382|21062275|21062275|21062275|21062382|21062382|21062382 21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 21062645 21062732 3'utr CG32512 FlyBase G52166.1 TTCTCCCAAGGACGCCTTGTTTGCGACGACCTTTCCAATCTGATTTCCTGTGATAAACTCAGCCCAAAACTCCCAAAACAAAACACCC 443 21062688 0.986273785 17 403 3534 0.907378336 2.062957834 0.09733124 0.340857788 0.541601256 443 55 4 578 X:21062645-21062732 8 529 4906 FBgn0052512 150.89 8.04 12.13666667 3.5058652 65.7960199 43.58692667 3 3 3 0.1 dme-miR-184-3p 7mer-m8 TCCGTCC X 21077165 21077171 + X_21077165_21077171_+ 0.608051488 0.658359493 0.633205491 0.035573128 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 X + 21077097 21077221 stop_codon bves FlyBase G63325.1 GTGCAATCTGAATTTATGCAACCGCCCGCTGCTGCTCAACTTGCCACGAACAGAAATCAGAGCACCCATCCGTCCCTTCACCTTTGACCTGCACAAGAACTACCAGAAAAACAACCCCACCCACA 115 21077173 0.966688129 15 105 567 0.90647482 1.498310554 0.086330935 0.173913043 0.316546763 115 10 3 126 X:21077097-21077221 7 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 TCCGTCC 7mer-m8 dme-miR-184-3p X + 21077095 21077200 stop_codon bves FlyBase G47750.1 AAGTGCAATCTGAATTTATGCAACCGCCCGCTGCTGCTCAACTTGCCACGAACAGAAATCAGAGCACCCATCCGTCCCTTCACCTTTGACCTGCACAAGAACTACC 91 21077173 0.969378518 16 82 456 0.905797101 1.795880017 0.057971014 0.417582418 0.615942029 91 12 1 125 X:21077095-21077200 7 86 4907 FBgn0031150 459.0933333 15.14333333 23.32333333 0.187325743 5.679066696 3.687294555 -8 -8 -8 0.1 dme-bantam-3p 7mer-A1 GATCTCA X 21078423 21078429 + X_21078423_21078429_+ 0.823348706 0.809769458 0.816559082 0.009601944 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 X + 21078359 21078459 3'utr bves FlyBase G63328.1 AAGTATAATGACTAGCATTGAAACTGGTTTGATTACAGCTCTTCAGCTTCAATTACCGATTCTAGATCTCAAGATCGATCAGTCTAGTGACAGGTGATAGG 14 21078419 0.981095638 11 14 97 1 1.146128036 0.428571429 0 0 14 0 0 14 X:21078359-21078459 7 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 GATCTCA 7mer-A1 dme-bantam-3p X + 21078409 21078459 3'utr bves FlyBase G47753.1 AATTACCGATTCTAGATCTCAAGATCGATCAGTCTAGTGACAGGTGATAGG 8 21078419 0.885381313 5 7 50 0.857142857 1.079181246 0.285714286 0.75 0.857142857 8 2 0 12 X:21078409-21078459 7 6.5 4908 FBgn0031150 459.0933333 15.14333333 23.32333333 0.014158341 0.429231785 0.278690868 4 4 4 0.1 dme-miR-277-3p 7mer-A1 GCATTTA X 21078535 21078541 + X_21078535_21078541_+ 0.823348698 0.823349562 0.82334913 6.36E-07 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 X + 21078525 21078594 3'utr bves FlyBase G63329.1 TTACCGCTTGGCATTTACTGGAAATTTACTGTGCTGGCACATCAATCAAGTCTCTAAATCTTCCATTAAC 12 21078533 0.856169551 8 12 76 1 1.204119983 0.25 0.333333333 0.5 12 0 0 16 X:21078525-21078594 7 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 GCATTTA 7mer-A1 dme-miR-277-3p X + 21078516 21078586 3'utr bves FlyBase G47754.1 TCTTATTTCTTACCGCTTGGCATTTACTGGAAATTTACTGTGCTGGCACATCAATCAAGTCTCTAAATCTT 10 21078533 0.989496815 3 8 91 0.9375 1.176091259 0.4375 0.4 0.625 10 1 0 15 X:21078516-21078586 7 6.5 4909 FBgn0031150 459.0933333 15.14333333 23.32333333 0.014158341 0.429231785 0.278690868 2 2 2 0.1 dme-miR-1007-3p 7mer-m8 TGAGCTT X 21078669 21078675 + X_21078669_21078675_+ 0.619671293 0.618726893 0.619199093 0.000667792 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 X + 21078646 21078704 3'utr bves FlyBase G63330.1 CGTTGATTGATTTGCATACAAATTGAGCTTGAAGAAAGCGTGAAAACTAATTAGAATTA 12 21078669 0.790891532 5 12 66 1 1.176091259 0.2 0.166666667 0.333333333 12 0 0 15 X:21078646-21078704 7 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 TGAGCTT 7mer-m8 dme-miR-1007-3p X + 21078638 21078750 3'utr bves FlyBase G47755.1 CGTTGATTCGTTGATTGATTTGCATACAAATTGAGCTTGAAGAAAGCGTGAAAACTAATTAGAATTAATATCGAATAATATTTGATAATGTTAAGCAATACATAGCCTAAGTT 20 21078669 0.98045255 10 18 116 0.956521739 1.342422681 0.173913043 0.15 0.260869565 20 1 0 22 X:21078638-21078750 7 10.5 4910 FBgn0031150 459.0933333 15.14333333 23.32333333 0.022871166 0.693374422 0.45019294 0 0 0 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA X 21078882 21078887 + X_21078882_21078887_+ 0.999993422 0.997596758 0.99879509 0.001694652 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 X + 21078751 21078903 3'utr bves FlyBase G63331.1 GTTGTACATACGCTATATATATATATTTGCTGTACATAATCCCGAGTGCCCTCAAATCCGAGAACCACACCCCCGTCCCCTAATCTCCACTAATACTCCCCCAAGAAAGTGTAATAAACGTAGTGGAATCAATGTGAATGTAAACAAGCCAAA 44 21078889 0.909026794 13 41 215 0.924528302 1.389166084 0.094339623 0.181818182 0.320754717 44 3 1 49 X:21078751-21078903 6 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 ATGTGA 6mer3-8 dme-miR-1003-3p X + 21078857 21078902 3'utr bves FlyBase G47757.1 AAGTGTAATAAACGTAGTGGAATCAATGTGAATGTAAACAAGCCAA 27 21078889 0.962920868 5 26 145 0.974358974 1.579783597 0 0.407407407 0.58974359 27 1 0 38 X:21078857-21078902 6 25 4911 FBgn0031150 459.0933333 15.14333333 23.32333333 0.054455158 1.650891481 1.071887952 -7 -7 -7 0.1 dme-miR-317-3p 6mer3-8 TGTGTT X 21080872 21080877 + X_21080872_21080877_+ 0.837647056 0.849031162 0.843339109 0.008049774 bves FBtr0332845|FBtr0332846 21080843|21080843 21082391|21082391 X + 21080845 21080922 3'utr bves FlyBase G63333.1 AAGGGATCCAGATGAAATGTTTAGACTTGTGTTTTTGAGTATTATTAGATGTATATTTTAGGCAATACTGAGGAACGA 205 21080865 0.844099422 19 191 2042 0.926640927 2.380211242 0.135135135 0.224390244 0.386100386 205 19 0 240 X:21080845-21080922 6 bves FBtr0332845|FBtr0332846 21080843|21080843 21082391|21082391 TGTGTT 6mer3-8 dme-miR-317-3p X + 21080846 21080914 3'utr bves FlyBase G47759.1 AGGGATCCAGATGAAATGTTTAGACTTGTGTTTTTGAGTATTATTAGATGTATATTTTAGGCAATACTG 167 21080865 0.766667626 19 154 1663 0.908333333 2.338456494 0.133333333 0.353293413 0.55 167 22 0 218 X:21080846-21080914 6 173 4912 FBgn0031150 459.0933333 15.14333333 23.32333333 0.376829693 11.42416905 7.417464628 7 7 7 0.1 dme-miR-965-3p 6mer3-8 TACGCT X 21081378 21081383 + X_21081378_21081383_+ 0.999826361 1 0.99991318 0.000122754 bves FBtr0332845|FBtr0332846 21080843|21080843 21082391|21082391 X + 21081363 21081404 3'utr bves FlyBase G63337.1 AGTTGCAAATTGTATTACGCTAAAACTACGGATTAGACGAAT 6 21081377 0.78452336 3 6 34 1 0.77815125 0 0 0 6 0 0 6 X:21081363-21081404 6 bves FBtr0332845|FBtr0332846 21080843|21080843 21082391|21082391 TACGCT 6mer3-8 dme-miR-965-3p X + 21081350 21081389 3'utr bves FlyBase G47761.1 TTAAAACTAGAATAGTTGCAAATTGTATTACGCTAAAACT 11 21081375 0.593559218 4 10 72 1 1.204119983 0.1875 0.272727273 0.5 11 0 0 16 X:21081350-21081389 6 7 4913 FBgn0031150 459.0933333 15.14333333 23.32333333 0.015247444 0.462249615 0.300128627 1 3 2 0.1 dme-miR-305-3p 7mer-m8 ATGTGCC X 21081854 21081860 + X_21081854_21081860_+ 0.67449447 0.674494549 0.67449451 0 bves FBtr0332845|FBtr0332846 21080843|21080843 21082391|21082391 X + 21081822 21081872 3'utr bves FlyBase G63339.1 GACCTTTGATAGTCCTTGTTGCTTTTGTATCTATGTGCCTGAATTCATGCA 18 21081855 0.988981958 2 18 174 1 1.342422681 0 0.166666667 0.318181818 18 0 0 22 X:21081822-21081872 7 bves FBtr0332845|FBtr0332846 21080843|21080843 21082391|21082391 ATGTGCC 7mer-m8 dme-miR-305-3p X + 21081814 21081878 3'utr bves FlyBase G47763.1 TACCCATAGACCTTTGATAGTCCTTGTTGCTTTTGTATCTATGTGCCTGAATTCATGCATGTGCA 14 21081855 0.989525683 2 13 133 0.925925926 0.920818754 0.148148148 0.642857143 0.814814815 14 0 2 25 X:21081814-21081878 7 14.5 4914 FBgn0031150 459.0933333 15.14333333 23.32333333 0.031583992 0.957517059 0.621695012 -1 -1 -1 0.1 dme-miR-1006-3p 6mer2-7 GAATTT X 2111807 2111812 + X_2111807_2111812_+ 0.99779179 0.99966534 0.998728565 0.001324765 csw FBtr0070379|FBtr0070380|FBtr0070378|FBtr0333260 2111732|2111800|2111800|2111800 2115701|2113664|2113664|2115701 X + 2111797 2111892 stop_codon csw FlyBase G58234.1 CATGACAAATGAATTTCTAAGTCGCGACGCCCCCTTGACACGCCCCCTTGACACGCCCCCCTGACACCCACCTCCCTCCACACGCACACAGACCAC 33 2111811 0.999769472 8 31 150 0.975 1.591064607 0.225 0.090909091 0.25 33 1 0 39 X:2111797-2111892 6 csw FBtr0070378|FBtr0333260|FBtr0070379|FBtr0070380 2111800|2111800|2111732|2111800 2113664|2115701|2115701|2113664 GAATTT 6mer2-7 dme-miR-1006-3p X + 2111793 2111873 stop_codon csw FlyBase G44053.1 AAAACATGACAAATGAATTTCTAAGTCGCGACGCCCCCTTGACACGCCCCCTTGACACGCCCCCCTGACACCCACCTCCCT 35 2111811 0.912101243 9 30 158 0.882352941 1.352182518 0.235294118 0.314285714 0.529411765 35 5 1 45 X:2111793-2111873 6 23 4915 FBgn0000382 593.5233333 15.53 24.04 0.038751636 1.481004507 0.956738769 -4 -4 -4 0.1 dme-miR-317-3p 6mer2-7 GTGTTC X 2112083 2112088 + X_2112083_2112088_+ 0.99999999 0.57209619 0.78604809 0.302573679 csw FBtr0070379|FBtr0070380|FBtr0070378|FBtr0333260 2111732|2111800|2111800|2111800 2115701|2113664|2113664|2115701 X + 2112011 2112099 3'utr csw FlyBase G58236.1 TCTATATACTTTTTTGTAATTGTGTGTAATGTAATGTTTAGTTTTATGTTATTGTCTCGCTTTATGTTGTAAGTGTTCCCTGCACACGA 39 2112072 0.743175333 17 38 467 0.977777778 1.643452676 0.177777778 0.102564103 0.222222222 39 1 0 44 X:2112011-2112099 6 csw FBtr0070378|FBtr0333260|FBtr0070379|FBtr0070380 2111800|2111800|2111732|2111800 2113664|2115701|2115701|2113664 GTGTTC 6mer2-7 dme-miR-317-3p X + 2112029 2112228 3'utr csw FlyBase G44055.1 ATTGTGTGTAATGTAATGTTTAGTTTTATGTTATTGTCTCGCTTTATGTTGTAAGTGTTCCCTGCACACGAAAAGCAGTAACCCCACCACCACCCCAAAACCCAAAACCCAGCATATTTATGTAGTAGTATTGTAAGAATCCCCGAACCGGTAGTTGAGGATACAATCTGGGCGGAACTGCAGCAGATCCGCCAAAAAAC 38 2112072 0.98582039 19 36 291 0.929824561 1.72427587 0.263157895 0.394736842 0.596491228 38 4 0 53 X:2112029-2112228 6 9.5 4916 FBgn0000382 593.5233333 15.53 24.04 0.01600611 0.611719253 0.395174709 11 11 11 0.1 dme-miR-8-3p 6mer2-7 AGTATT X 2112155 2112160 + X_2112155_2112160_+ 0.985422097 0.999994051 0.992708074 0.01030396 csw FBtr0070379|FBtr0070380|FBtr0070378|FBtr0333260 2111732|2111800|2111800|2111800 2115701|2113664|2113664|2115701 X + 2112138 2112210 3'utr csw FlyBase G58237.1 CAGCATATTTATGTAGTAGTATTGTAAGAATCCCCGAACCGGTAGTTGAGGATACAATCTGGGCGGAACTGCA 20 2112184 0.913359323 10 19 123 0.962962963 1.113943352 0.407407407 0.2 0.407407407 20 0 1 26 X:2112138-2112210 6 csw FBtr0070378|FBtr0333260|FBtr0070379|FBtr0070380 2111800|2111800|2111732|2111800 2113664|2115701|2115701|2113664 AGTATT 6mer2-7 dme-miR-8-3p X + 2112029 2112228 3'utr csw FlyBase G44055.1 ATTGTGTGTAATGTAATGTTTAGTTTTATGTTATTGTCTCGCTTTATGTTGTAAGTGTTCCCTGCACACGAAAAGCAGTAACCCCACCACCACCCCAAAACCCAAAACCCAGCATATTTATGTAGTAGTATTGTAAGAATCCCCGAACCGGTAGTTGAGGATACAATCTGGGCGGAACTGCAGCAGATCCGCCAAAAAAC 38 2112145 0.98582039 19 36 291 0.929824561 1.72427587 0.263157895 0.394736842 0.596491228 38 4 0 53 X:2112029-2112228 6 9.5 4917 FBgn0000382 593.5233333 15.53 24.04 0.01600611 0.611719253 0.395174709 -29 10 -9.5 0.1 dme-miR-308-3p 7mer-m1 TGTGATT X 2112756 2112762 + X_2112756_2112762_+ 0.456932899 0.457093413 0.457013156 0.000113491 csw FBtr0070379|FBtr0070380|FBtr0070378|FBtr0333260 2111732|2111800|2111800|2111800 2115701|2113664|2113664|2115701 X + 2112618 2112784 3'utr csw FlyBase G58239.1 TGAAACGGAAACGGGTTACCGGTTGGAGTGCAAATAAAGTTTTTAGTGTAGTAAGTGTTGACAAAATCGATAGAGAAGAAATTAGAGGAGTAACTGAGGCAGTAAGCACGTAACGATAATGATACAAAAAGCGTTGATTGTGATTCGAGTGACAGCGAGAACAGAAA 396 2112755 0.967813999 24 374 2421 0.945295405 1.594091062 0.396061269 0.131313131 0.24726477 396 15 10 432 X:2112618-2112784 7 csw FBtr0070378|FBtr0333260|FBtr0070379|FBtr0070380 2111800|2111800|2111732|2111800 2113664|2115701|2115701|2113664 TGTGATT 7mer-m1 dme-miR-308-3p X + 2112618 2112784 3'utr csw FlyBase G44057.1 TGAAACGGAAACGGGTTACCGGTTGGAGTGCAAATAAAGTTTTTAGTGTAGTAAGTGTTGACAAAATCGATAGAGAAGAAATTAGAGGAGTAACTGAGGCAGTAAGCACGTAACGATAATGATACAAAAAGCGTTGATTGTGATTCGAGTGACAGCGAGAACAGAAA 275 2112755 0.974734241 22 250 1696 0.902147971 1.347042878 0.436754177 0.367272727 0.584725537 275 25 16 378 X:2112618-2112784 7 214 4918 FBgn0000382 593.5233333 15.53 24.04 0.360558697 13.77978107 8.901830283 1 1 1 0.1 dme-miR-317-3p 6mer3-8 TGTGTT X 2113125 2113130 + X_2113125_2113130_+ 0.999350482 0.99999481 0.999672646 0.000455589 csw FBtr0070379|FBtr0070380|FBtr0070378|FBtr0333260 2111732|2111800|2111800|2111800 2115701|2113664|2113664|2115701 X + 2112984 2113154 3'utr csw FlyBase G58242.1 ACAGATCCAGATTCAGATCCAGATCTATATCTCTAGCAGCCAATTTCTGATTTCCCCTTCCCTCTTAGTTTTCCCATTAATTTAGTGATTGTGTGTATATTTTTAATTGTATATTGAAGATTATTTATAGCGATTGTCCATTGTGTTACATTTCAAATGTTCGAAAGAATT 49 2113124 0.990338257 16 45 456 0.93220339 1.263241435 0.06779661 0.163265306 0.305084746 49 2 2 55 X:2112984-2113154 6 csw FBtr0070378|FBtr0333260|FBtr0070379|FBtr0070380 2111800|2111800|2111732|2111800 2113664|2115701|2115701|2113664 TGTGTT 6mer3-8 dme-miR-317-3p X + 2113090 2113164 3'utr csw FlyBase G44062.1 TTGTATATTGAAGATTATTTATAGCGATTGTCCATTGTGTTACATTTCAAATGTTCGAAAGAATTGTATTTAGAA 28 2113124 0.990204993 9 24 256 0.923076923 1.079181246 0.076923077 0.285714286 0.487179487 28 1 2 36 X:2113090-2113164 6 21 4919 FBgn0000382 593.5233333 15.53 24.04 0.035381928 1.352221507 0.873544093 1 1 1 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 2113342 2113347 + X_2113342_2113347_+ 0.835718815 0.999625428 0.917672121 0.115899468 csw FBtr0070379|FBtr0070380|FBtr0070378|FBtr0333260 2111732|2111800|2111800|2111800 2115701|2113664|2113664|2115701 X + 2113229 2113363 3'utr csw FlyBase G58243.2 TCTGTCTCTCTCTCTCTCTCTCCCTCACTGTCTATGCACGAGTGTTTTCTTAACTAAGTTTATTATTTCAACGCTGAAGCGTAATCAAACTATATATGCAATATTTAAGCACAGTACCTTGGGCGCTGCAAAGAA 26 2113348 0.990156291 13 22 178 0.9 0.954242509 0.133333333 0.153846154 0.266666667 26 1 2 27 X:2113229-2113363 6 csw FBtr0070378|FBtr0333260|FBtr0070379|FBtr0070380 2111800|2111800|2111732|2111800 2113664|2115701|2115701|2113664 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X + 2113296 2113361 3'utr csw FlyBase G44064.1 TCAACGCTGAAGCGTAATCAAACTATATATGCAATATTTAAGCACAGTACCTTGGGCGCTGCAAAG 9 2113348 0.952522644 5 9 43 1 1.079181246 0.416666667 0.333333333 0.5 9 0 0 12 X:2113296-2113361 6 6.5 4920 FBgn0000382 593.5233333 15.53 24.04 0.010951549 0.418544752 0.270382696 -6 -6 -6 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA X 2113463 2113468 + X_2113463_2113468_+ 0.999996493 1 0.999998247 2.47E-06 csw FBtr0070379|FBtr0070380|FBtr0070378|FBtr0333260 2111732|2111800|2111800|2111800 2115701|2113664|2113664|2115701 X + 2113432 2113473 3'utr csw FlyBase G58244.1 TAGCAGCGAAATGTAAATCAATTAGATTATTGTGCAAATTTG 5 2113461 0.9865841 3 5 42 1 0.698970004 0.4 0 0 5 0 0 5 X:2113432-2113473 6 csw FBtr0070378|FBtr0333260|FBtr0070379|FBtr0070380 2111800|2111800|2111732|2111800 2113664|2115701|2115701|2113664 GTGCAA 6mer3-8 dme-miR-92b-3p X + 2113433 2113502 3'utr csw FlyBase G44065.1 AGCAGCGAAATGTAAATCAATTAGATTATTGTGCAAATTTGAGTAATATATTTAAAACATACCCTTATTT 7 2113461 0.986680895 6 7 56 1 1.079181246 0.083333333 0.285714286 0.583333333 7 0 0 12 X:2113433-2113502 6 3.5 4921 FBgn0000382 593.5233333 15.53 24.04 0.005896988 0.225370251 0.145590682 2 2 2 0.1 dme-bantam-3p 6mer3-8 TGATCT X 2113554 2113559 + X_2113554_2113559_+ 0.980156246 0.977258538 0.978707392 0.002048983 csw FBtr0070379|FBtr0070380|FBtr0070378|FBtr0333260 2111732|2111800|2111800|2111800 2115701|2113664|2113664|2115701 X + 2113521 2113579 3'utr csw FlyBase G58245.1 GCTTTTGTAAGTGCTTTAAATTGTTATTCATCTTGATCTTGCAAAAAAATGAAAAAACC 200 2113553 0.756151155 9 190 1839 0.957692308 1.618048097 0.05 0.24 0.415384615 200 6 5 249 X:2113521-2113579 6 csw FBtr0070378|FBtr0333260|FBtr0070379|FBtr0070380 2111800|2111800|2111732|2111800 2113664|2115701|2115701|2113664 TGATCT 6mer3-8 dme-bantam-3p X + 2113531 2113574 3'utr csw FlyBase G44066.1 GTGCTTTAAATTGTTATTCATCTTGATCTTGCAAAAAAATGAAA 160 2113553 0.75117583 6 154 1474 0.968325792 1.631443769 0.013574661 0.2875 0.484162896 160 3 4 214 X:2113531-2113574 6 177.5 4922 FBgn0000382 593.5233333 15.53 24.04 0.299061536 11.42949131 7.383527454 1 1 1 0.1 dme-miR-34-5p 7mer-A1 ACTGCCA X 2116135 2116141 - X_2116135_2116141_- 0.818484028 0.819341699 0.818912864 0.000606485 ph-d FBtr0070433|FBtr0112843 2115725|2115725 2116865|2116865 X - 2116076 2116202 3'utr ph-d FlyBase G64261.1 TAGCAAGAGGGGTAATATCGTAGCTCAAATGACAGGACGCCACATGTATGATAGAGCATAGACTGCCATCCCAGTCATCAATTCATCACTTTGTATAGAAGTTCACAATTACTCATAATCACTAACG 1317 2116144 0.919919228 17 1284 5161 0.973951715 2.583482164 0.195679797 0.1579347 0.295425667 1317 38 3 1533 X:2116076-2116202 7 ph-d FBtr0070433|FBtr0112843 2115725|2115725 2116865|2116865 ACTGCCA 7mer-A1 dme-miR-34-5p X - 2116120 2116337 3'utr ph-d FlyBase G48452.2 TGACCATGCTGATCTCCCACGACCTTTGCATGGACCTTTGCCTACCTGTGGACCGGGTCCAACCGGGTCTGCCACCCAAGCTGAATTTGATTCACTTGAAGCGGACTTTCAATCCTTTTGTACGTAATCTAAACATAGCAAGAGGGGTAATATCGTAGCTCAAATGACAGGACGCCACATGTATGATAGAGCATAGACTGCCATCCCAGTCATCAATT 834 2116144 0.9406239 25 814 3229 0.978613569 2.423900919 0.205752212 0.42206235 0.644542773 834 25 4 1327 X:2116120-2116337 7 653 4923 FBgn0004860 503.0533333 10.12666667 15.45333333 1.2980731 64.48321264 42.25625539 3 3 3 0.1 dme-miR-1012-3p 6mer3-8 TTGACT X 2126635 2126640 - X_2126635_2126640_- 0.998585167 0.999635538 0.999110353 0.000742674 ph-p FBtr0301515|FBtr0343589|FBtr0070432|FBtr0345598 2126208|2126208|2126208|2126208 2126808|2126808|2126808|2126808 X - 2126626 2126655 3'utr ph-p FlyBase G64274.1 CAGGTCTTAAACCCATTGACTTTGTACATA 10 2126640 0.750495144 2 10 79 1 1.113943352 0 0.2 0.384615385 10 0 0 13 X:2126626-2126655 6 ph-p FBtr0301515|FBtr0343589|FBtr0070432|FBtr0345598 2126208|2126208|2126208|2126208 2126808|2126808|2126808|2126808 TTGACT 6mer3-8 dme-miR-1012-3p X - 2126621 2126663 3'utr ph-p FlyBase G48460.1 CAGGCCATCAGGTCTTAAACCCATTGACTTTGTACATACTCCC 14 2126639 0.813840302 6 14 105 1 1.361727836 0.217391304 0.5 0.695652174 14 0 0 23 X:2126621-2126663 6 11.5 4924 FBgn0004861 584.37 11.91 18.33 0.019679313 0.965575147 0.627386798 0 -1 -0.5 0.1 dme-bantam-3p 7mer-m8 TGATCTC X 2126772 2126778 - X_2126772_2126778_- 0.661614909 0.66161511 0.66161501 1.41E-07 ph-p FBtr0301515|FBtr0343589|FBtr0070432|FBtr0345598 2126208|2126208|2126208|2126208 2126808|2126808|2126808|2126808 X - 2126748 2126817 stop_codon ph-p FlyBase G64275.2 GCGCAGTAGGGCAGCTAGAGCACGAAAAGCCGAAAAAGATGATCTCCTAACCGAGCAGTGGACCTGGTTC 187 2126778 0.926166365 4 177 612 0.953051643 1.705436047 0.192488263 0.117647059 0.225352113 187 7 3 203 X:2126748-2126817 7 ph-p FBtr0301515|FBtr0343589|FBtr0070432|FBtr0345598 2126208|2126208|2126208|2126208 2126808|2126808|2126808|2126808 TGATCTC 7mer-m8 dme-bantam-3p X - 2126700 2126821 stop_codon ph-p FlyBase G48461.1 AGGAGCGCAGTAGGGCAGCTAGAGCACGAAAAGCCGAAAAAGATGATCTCCTAACCGAGCAGTGGACCTGGTTCAACCAAGTCTGTCGTGCCAGGTGATTCTGATTCAATCGGGCAGGCGAA 134 2126778 0.877258461 11 130 472 0.972826087 1.65079304 0.135869565 0.298507463 0.489130435 134 2 3 179 X:2126700-2126821 7 151.5 4925 FBgn0004861 584.37 11.91 18.33 0.259253555 12.72040302 8.265139116 0 0 0 0.1 dme-miR-252-5p 8mer-m1 GTACTTAG X 21292425 21292432 - X_21292425_21292432_- 0.636703917 0.63676533 0.636734624 4.34E-05 CG1718 FBtr0306679 21292306 21293337 X - 21292396 21292448 3'utr CG1718 FlyBase G69406.1 GTGTATTTATTTCGATGTACTTAGACCGGCTTACCAAAGCGTGTAAATAAGTC 33 21292433 0.753608723 4 33 234 1 1.556302501 0.083333333 0.090909091 0.166666667 33 0 0 36 X:21292396-21292448 8 CG1718 FBtr0306679 21292306 21293337 GTACTTAG 8mer-m1 dme-miR-252-5p X - 21292404 21292449 3'utr CG1718 FlyBase G52188.1 TGTGTATTTATTTCGATGTACTTAGACCGGCTTACCAAAGCGTGTA 32 21292433 0.738927434 4 31 223 0.97826087 1.653212514 0.043478261 0.3125 0.52173913 32 1 0 45 X:21292404-21292449 8 32 4926 FBgn0031170 761.1566667 13.58333333 20.66333333 0.042041279 2.355828221 1.548636877 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 21292709 21292714 - X_21292709_21292714_- 0.99999938 0.999999979 0.99999968 4.24E-07 CG1718 FBtr0306679|FBtr0306679|FBtr0306679 21292306|21292306|21292306 21293337|21293337|21293337 X - 21292660 21292935 stop_codon CG1718 FlyBase G69408.1 TCCAGTCGCCTCTCGGAATTGAGGAAGCTGTGCAAGTGCCTGCTAACTAATGAGTTTTGAACCAACTACCTGAGCGGGTCCGTTACGATCCGATTTTCACCTGATCTTACACTCACAGATAATAATGTTGTATACCAAAGCAACGCCGATGCCTGAACAGCTAACAAATAGTTTCTAAGCTCGACCTGACAATAGATAGCAGCTATTATGCCTTATTTCATTGTGATCATCTAGCGAAATTTGCACCAAACGACGAGAGATCTTTAATTTTTATGT 238 21292715 0.984718201 43 227 1827 0.95532646 1.489802286 0.18556701 0.18907563 0.336769759 238 5 8 278 X:21292660-21292935 6 CG1718 FBtr0306679|FBtr0306679|FBtr0306679 21292306|21292306|21292306 21293337|21293337|21293337 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 21292659 21292897 stop_codon CG1718 FlyBase G52191.1 CCTGCTAACTAATGAGTTTTGAACCAACTACCTGAGCGGGTCCGTTACGATCCGATTTTCACCTGATCTTACACTCACAGATAATAATGTTGTATACCAAAGCAACGCCGATGCCTGAACAGCTAACAAATAGTTTCTAAGCTCGACCTGACAATAGATAGCAGCTATTATGCCTTATTTCATTGTGATCATCTAGCGAAATTTGCACCAAACGACGAGAGATCTTTAATTTTTATGTA 168 21292715 0.984176359 41 155 1237 0.906015038 1.603865792 0.112781955 0.392857143 0.616541353 168 20 5 241 X:21292659-21292897 6 70 4927 FBgn0031170 761.1566667 13.58333333 20.66333333 0.091965298 5.153374233 3.387643168 1 1 1 0.1 dme-bantam-3p 6mer3-8 TGATCT X 21292829 21292834 - X_21292829_21292834_- 0.999967408 0.999988382 0.999977895 1.48E-05 CG1718 FBtr0306679 21292306 21293337 X - 21292660 21292935 stop_codon CG1718 FlyBase G69408.1 TCCAGTCGCCTCTCGGAATTGAGGAAGCTGTGCAAGTGCCTGCTAACTAATGAGTTTTGAACCAACTACCTGAGCGGGTCCGTTACGATCCGATTTTCACCTGATCTTACACTCACAGATAATAATGTTGTATACCAAAGCAACGCCGATGCCTGAACAGCTAACAAATAGTTTCTAAGCTCGACCTGACAATAGATAGCAGCTATTATGCCTTATTTCATTGTGATCATCTAGCGAAATTTGCACCAAACGACGAGAGATCTTTAATTTTTATGT 238 21292834 0.984718201 43 227 1827 0.95532646 1.489802286 0.18556701 0.18907563 0.336769759 238 5 8 278 X:21292660-21292935 6 CG1718 FBtr0332489|FBtr0306679 21292712|21292306 21293337|21293337 TGATCT 6mer3-8 dme-bantam-3p X - 21292659 21292897 stop_codon CG1718 FlyBase G52191.1 CCTGCTAACTAATGAGTTTTGAACCAACTACCTGAGCGGGTCCGTTACGATCCGATTTTCACCTGATCTTACACTCACAGATAATAATGTTGTATACCAAAGCAACGCCGATGCCTGAACAGCTAACAAATAGTTTCTAAGCTCGACCTGACAATAGATAGCAGCTATTATGCCTTATTTCATTGTGATCATCTAGCGAAATTTGCACCAAACGACGAGAGATCTTTAATTTTTATGTA 168 21292834 0.984176359 41 155 1237 0.906015038 1.603865792 0.112781955 0.392857143 0.616541353 168 20 5 241 X:21292659-21292897 6 58.5 4928 FBgn0031170 761.1566667 13.58333333 20.66333333 0.076856714 4.306748466 2.831101791 0 0 0 0.1 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT X 21321214 21321220 - X_21321214_21321220_- 0.524043283 0.549648623 0.536845953 0.018105681 Dd FBtr0339624|FBtr0077226|FBtr0339623 21319789|21319789|21319789 21321321|21321321|21321321 X - 21321190 21321413 stop_codon Dd FlyBase G69428.2 TGTCGCTGCTGCCCATGCTGGATGCGCTGAGGTTCACGAACGACGTGAGATCGGTGCTGTCGAGGAACTTGCACCTGCACCGCCTCTGGTAGCAGGTGGGCCGCCTGTCGCTAGTTTAGTTTATCTATTTAGAAGGAGCACTGAGGGCCAGCGAAGTGGGGAGAATATCTTCTGAAATTAACAACAAACAAGGTGGTGCTGTGACACATTAACGAATTTGTTCA 202 21321219 0.952119205 22 191 893 0.954166667 1.514737442 0.058333333 0.163366337 0.295833333 202 5 6 229 X:21321190-21321413 7 Dd FBtr0077226|FBtr0339623|FBtr0339624 21319789|21319789|21319789 21321321|21321321|21321321 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" X - 21321191 21321259 3'utr Dd FlyBase G52211.2 AGTGGGGAGAATATCTTCTGAAATTAACAACAAACAAGGTGGTGCTGTGACACATTAACGAATTTGTTC 84 21321219 0.844775656 6 79 329 0.96124031 1.792391689 0.015503876 0.428571429 0.627906977 84 4 1 124 X:21321191-21321259 7 122.5 4929 FBgn0029067 2906.393333 121.66 187.2766667 0.042148459 1.006904488 0.654112454 -1 -1 -1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 21327635 21327641 + X_21327635_21327641_+ 0.823275377 0.823279656 0.823277517 3.04E-06 CG1486 FBtr0077190|FBtr0077191 21327402|21327402 21328150|21328150 X + 21327617 21327664 3'utr CG1486 FlyBase G63379.1 ACTTAAACGAAAAGAATTCCAAAGAGGATGATTGTTCGCCCGAAAAGA 24 21327633 0.906556673 3 24 71 1 1.462397998 0.310344828 0.208333333 0.344827586 24 0 0 29 X:21327617-21327664 7 CG1486 FBtr0077190|FBtr0077191 21327402|21327402 21328150|21328150 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X + 21327621 21327658 3'utr CG1486 FlyBase G47785.1 AAACGAAAAGAATTCCAAAGAGGATGATTGTTCGCCCG 21 21327633 0.865720789 3 21 52 1 1.544068044 0.514285714 0.476190476 0.685714286 21 0 0 35 X:21327621-21327658 7 22.5 4930 FBgn0031174 458.93 15.08666667 23.13333333 0.049027085 1.49138312 0.972622478 2 2 2 0.1 dme-bantam-3p 6mer3-8 TGATCT X 21327734 21327739 + X_21327734_21327739_+ 1 1 1 0 CG1486 FBtr0077190|FBtr0077191 21327402|21327402 21328150|21328150 X + 21327670 21327765 3'utr CG1486 FlyBase G63380.1 AGATGATGATGATATGATCCAATTGAATTGCTTTTATGTATTTATATGTATATGGCTATTTCTATGATCTTTTATATATCTCCATTATATATTATA 72 21327734 0.994667713 8 69 949 0.967032967 1.944482672 0 0.180555556 0.351648352 72 3 0 88 X:21327670-21327765 6 CG1486 FBtr0077190|FBtr0077191 21327402|21327402 21328150|21328150 TGATCT 6mer3-8 dme-bantam-3p X + 21327719 21327750 3'utr CG1486 FlyBase G47786.1 ATATGGCTATTTCTATGATCTTTTATATATCT 31 21327734 0.706210673 5 30 374 0.95 1.579783597 0 0.258064516 0.425 31 2 0 38 X:21327719-21327750 6 50 4931 FBgn0031174 458.93 15.08666667 23.13333333 0.108949077 3.314184711 2.161383285 0 0 0 0.1 dme-miR-965-3p 7mer-m8 TACGCTT X 21327843 21327849 + X_21327843_21327849_+ 0.620204855 0.620204831 0.620204843 7.07E-08 CG1486 FBtr0077190|FBtr0077191 21327402|21327402 21328150|21328150 X + 21327768 21327858 3'utr CG1486 FlyBase G63381.1 ATTTTACCTTATACTTTACTCCCACCATTATTGTTGATTATGATCAGAGGGAAATGTGCGTAACTTCGTCCTCTTTACGCTTTTATTTTTT 22 21327842 0.990855124 8 21 222 0.931034483 0.954242509 0.068965517 0.318181818 0.482758621 22 0 2 27 X:21327768-21327858 7 CG1486 FBtr0077190|FBtr0077191 21327402|21327402 21328150|21328150 TACGCTT 7mer-m8 dme-miR-965-3p X + 21327825 21327859 3'utr CG1486 FlyBase G47788.1 GCGTAACTTCGTCCTCTTTACGCTTTTATTTTTTT 9 21327842 0.824757672 4 9 99 1 1 0 0.111111111 0.2 9 0 0 10 X:21327825-21327859 7 12 4932 FBgn0031174 458.93 15.08666667 23.13333333 0.026147779 0.795404331 0.518731988 1 1 1 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 21327884 21327889 + X_21327884_21327889_+ 0.586023878 0.526195752 0.556109815 0.042304855 CG1486 FBtr0077190|FBtr0077191 21327402|21327402 21328150|21328150 X + 21327867 21327905 3'utr CG1486 FlyBase G63382.1 TAATTATTCAGATGCAAGTACCTTTGAGAGACATAATAT 47 21327891 0.822343857 2 47 241 1 1.832508913 0.352941176 0.276595745 0.5 47 0 0 68 X:21327867-21327905 6 CG1486 FBtr0077190|FBtr0077191 21327402|21327402 21328150|21328150 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X + 21327869 21327944 3'utr CG1486 FlyBase G47789.1 ATTATTCAGATGCAAGTACCTTTGAGAGACATAATATATATACATTTATATATATATAGGCAATTCTTCAATGTTC 38 21327891 0.829097737 6 38 207 1 1.799340549 0.253968254 0.473684211 0.682539683 38 0 0 63 X:21327869-21327944 6 40.5 4933 FBgn0031174 458.93 15.08666667 23.13333333 0.088248753 2.684489616 1.750720461 -7 -7 -7 0.1 dme-miR-1003-3p 7mer-m8 ATGTGAG X 21344406 21344412 + X_21344406_21344412_+ 0.646433786 0.671721379 0.659077582 0.017881033 fliI FBtr0077192 21344184 21345088 X + 21344387 21344427 3'utr fliI FlyBase G63401.1 GTCGAAGAGCACGCCTGCAATGTGAGTTTAGTTTTATGAAA 18 21344413 0.98872099 3 16 161 0.947368421 0.954242509 0.157894737 0.055555556 0.105263158 18 0 1 18 X:21344387-21344427 7 fliI FBtr0077192 21344184 21345088 ATGTGAG 7mer-m8 dme-miR-1003-3p X + 21344377 21344425 3'utr fliI FlyBase G47800.1 TTAACCAGAAGTCGAAGAGCACGCCTGCAATGTGAGTTTAGTTTTATGA 11 21344413 0.975215171 4 11 72 1 1.255272505 0.166666667 0.454545455 0.666666667 11 0 0 18 X:21344377-21344425 7 14.5 4934 FBgn0000709 400.18 10.03 15.43 0.036233695 1.445663011 0.939727803 -7 -7 -7 0.1 dme-miR-8-3p 6mer2-7 AGTATT X 21344801 21344806 + X_21344801_21344806_+ 0.953588419 0.94270425 0.948146335 0.007696221 fliI FBtr0077192 21344184 21345088 X + 21344790 21344862 3'utr fliI FlyBase G63404.1 CAAGAACGCCAAGTATTCGCCCACTCCCTGCGAGAAAACCACATGAGTATATTGAATGCAAATATACATACAT 19 21344805 0.916855791 6 19 89 1 1.278753601 0.157894737 0 0 19 0 0 19 X:21344790-21344862 6 fliI FBtr0077192 21344184 21345088 AGTATT 6mer2-7 dme-miR-8-3p X + 21344791 21344855 3'utr fliI FlyBase G47801.1 AAGAACGCCAAGTATTCGCCCACTCCCTGCGAGAAAACCACATGAGTATATTGAATGCAAATATA 8 21344805 0.937991028 4 8 36 1 1.230448921 0.294117647 0.75 0.882352941 8 0 0 17 X:21344791-21344855 6 10.5 4935 FBgn0000709 400.18 10.03 15.43 0.026238193 1.046859422 0.680492547 -4 -4 -4 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC X 21344955 21344960 + X_21344955_21344960_+ 0.999999994 0.999999996 0.999999995 0 fliI FBtr0077192 21344184 21345088 X + 21344907 21345041 3'utr fliI FlyBase G63405.1 ATATATATATATATACATACGCTGAGCTGAGAGGATTACTCCCCTGTGCTAGTCCTTTTAAAATGTTAACCTACTTAAAGCTAGCCTGTAATAAAGTCAAGGAAGCACTAAAACTAATTGTACAAATGCCCACGT 69 21344953 0.962612703 14 64 514 0.912087912 1.618048097 0.021978022 0.217391304 0.406593407 69 7 1 83 X:21344907-21345041 6 fliI FBtr0077192 21344184 21345088 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" X + 21344908 21344975 3'utr fliI FlyBase G47802.1 TATATATATATATACATACGCTGAGCTGAGAGGATTACTCCCCTGTGCTAGTCCTTTTAAAATGTTAA 41 21344953 0.894726351 6 37 323 0.936507937 1.293730757 0.031746032 0.414634146 0.619047619 41 2 2 59 X:21344908-21344975 6 43 4936 FBgn0000709 400.18 10.03 15.43 0.107451647 4.287138584 2.786779002 2 2 2 0.1 dme-miR-968-5p 8mer-A1 ACTACTTA X 21346812 21346819 + X_21346812_21346819_+ 0.604289131 0.568976636 0.586632883 0.024969708 dod FBtr0077193 21346430 21346858 X + 21346760 21346836 3'utr dod FlyBase G63411.1 AAAGGGAATCGCAATTAGGAATTGGAATCTGAGTGAAGCTGTTTACTTTGCGACTACTTATTTATTAGACTAAAGCT 13 21346808 0.991094785 7 11 114 0.857142857 1.079181246 0.142857143 0.076923077 0.142857143 13 2 0 12 X:21346760-21346836 8 dod FBtr0077193 21346430 21346858 ACTACTTA 8mer-A1 dme-miR-968-5p X + 21346755 21346834 3'utr dod FlyBase G47807.1 AAGGGAAAGGGAATCGCAATTAGGAATTGGAATCTGAGTGAAGCTGTTTACTTTGCGACTACTTATTTATTAGACTAAAG 9 21346782 0.984918386 5 9 76 1 1.079181246 0.416666667 0.222222222 0.416666667 9 0 0 12 X:21346755-21346834 8 6.5 4937 FBgn0015379 457.9566667 55.63 84.90666667 0.014193483 0.11684343 0.076554648 4 30 17 0.1 dme-miR-276a-3p 7mer-A1 GTTCCTA X 21354267 21354273 + X_21354267_21354273_+ 0.823349388 0.823349553 0.823349471 1.41E-07 sol FBtr0089679 21354101 21357912 X + 21354243 21354291 3'utr sol FlyBase G63418.1 GTAAGATGTGGATATGCATCAAATGTTCCTATGCCTACAACCGACTCTG 25 21354266 0.782480123 3 25 182 1 1.462397998 0.172413793 0.12 0.24137931 25 0 0 29 X:21354243-21354291 7 sol FBtr0089679 21354101 21357912 GTTCCTA 7mer-A1 dme-miR-276a-3p X + 21354247 21354305 3'utr sol FlyBase G47814.1 GATGTGGATATGCATCAAATGTTCCTATGCCTACAACCGACTCTGGCTCCAGACTTGCG 13 21354266 0.760785556 6 13 84 1 1.255272505 0.277777778 0.307692308 0.5 13 0 0 18 X:21354247-21354305 7 17.5 4938 FBgn0003464 838.5366667 18.14666667 27.72333333 0.02086969 0.964364438 0.631237225 1 1 1 0.1 dme-bantam-3p 6mer3-8 TGATCT X 21355756 21355761 + X_21355756_21355761_+ 0.60768722 0.696849561 0.65226839 0.063047338 sol FBtr0089679 21354101 21357912 X + 21355729 21355784 3'utr sol FlyBase G63421.1 CGGCAAGTGGACGACGGTGCTGGTGGATGATCTGCTGCCATGCGACAAGCGTGGCC 13 21355756 0.721381707 3 12 81 0.928571429 1.113943352 0.428571429 0.076923077 0.142857143 13 1 0 13 X:21355729-21355784 6 sol FBtr0089679 21354101 21357912 TGATCT 6mer3-8 dme-bantam-3p X + 21355740 21355773 3'utr sol FlyBase G47817.1 CGACGGTGCTGGTGGATGATCTGCTGCCATGCGA 5 21355757 0.705691392 3 5 32 1 0.698970004 0.2 0 0 5 0 0 5 X:21355740-21355773 6 8.5 4939 FBgn0003464 838.5366667 18.14666667 27.72333333 0.010136706 0.468405584 0.306600938 0 -1 -0.5 0.1 dme-bantam-3p 6mer2-7 GATCTC X 21356356 21356361 + X_21356356_21356361_+ 0.735176893 0.975276496 0.855226694 0.169776055 sol FBtr0089679 21354101 21357912 X + 21356331 21356485 3'utr sol FlyBase G63424.1 ACGGCGCCAGCGAGGGCGTCTTCTGGATCTCGTTCGAGGATGTGCTTAACTACTTCGACTGCATCGATATCTGCAAGGTGCGCTCCGGCTGGAACGAGGTGCGTCTGCAGGGGACATTGCAGCCCCTGTGCTCCATCTCCTGTGTGCTGCTCACC 51 21356353 0.982537121 17 50 371 0.983606557 1.77815125 0.229508197 0.156862745 0.295081967 51 1 0 60 X:21356331-21356485 6 sol FBtr0089679 21354101 21357912 GATCTC 6mer2-7 dme-bantam-3p X + 21356336 21356418 3'utr sol FlyBase G47819.1 GCCAGCGAGGGCGTCTTCTGGATCTCGTTCGAGGATGTGCTTAACTACTTCGACTGCATCGATATCTGCAAGGTGCGCTCCGG 22 21356353 0.965645347 8 18 144 0.833333333 1.397940009 0.333333333 0.272727273 0.466666667 22 5 0 25 X:21356336-21356418 6 27 4940 FBgn0003464 838.5366667 18.14666667 27.72333333 0.03219895 1.487876561 0.973908861 3 3 3 0.1 dme-miR-307a-3p 8mer-A1 GGTTGTGA X 21357059 21357066 + X_21357059_21357066_+ 0.671943123 0.603857888 0.637900506 0.048143507 sol FBtr0089679 21354101 21357912 X + 21357033 21357130 intron-3'utr sol FlyBase G63427.1 TTTCCTTTACAGGGCTGGGCGGGTCTGGTTGTGATGGTGGAAAATAGACATGAGAATAAGTGGATCCATGTGAAATGTGATTGCCAGGAGAGCTACAA 96 21357058 0.956625751 10 91 551 0.947826087 1.736396502 0.460869565 0.166666667 0.304347826 96 5 1 109 X:21357033-21357130 8 sol FBtr0089679 21354101 21357912 GGTTGTGA 8mer-A1 dme-miR-307a-3p X + 21357043 21357140 intron-3'utr sol FlyBase G47823.1 AGGGCTGGGCGGGTCTGGTTGTGATGGTGGAAAATAGACATGAGAATAAGTGGATCCATGTGAAATGTGATTGCCAGGAGAGCTACAATGTGGTGTCG 67 21357058 0.962499778 12 63 370 0.933962264 1.217483944 0.5 0.432835821 0.641509434 67 2 5 99 X:21357043-21357140 8 45.5 4941 FBgn0003464 838.5366667 18.14666667 27.72333333 0.054261193 2.507347539 1.641216785 1 1 1 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 21357546 21357552 + X_21357546_21357552_+ 0.642077216 0.643734134 0.642905675 0.001171605 sol FBtr0089679|FBtr0089678|FBtr0346608|FBtr0301583 21354101|21357433|21357433|21357433 21357912|21357912|21357912|21357912 X + 21357474 21357623 3'utr sol FlyBase G63430.1 TCGATGCTACCCCGCGATATGTCGCTGTTCGAATCCTGATTTGCATGCGTCTCCTCTCAATTCTACCCGTCTTCTAGTCGATGTTCTGTTAACGAATCACACATTACAGCGAAAAACCCAAAGTTGAAACCAATCAGCATGCGAAACAAT 185 21357545 0.986891627 17 178 1548 0.973333333 2.039414119 0.426666667 0.189189189 0.333333333 185 5 1 219 X:21357474-21357623 7 sol FBtr0346608|FBtr0301583|FBtr0089679|FBtr0089678 21357433|21357433|21354101|21357433 21357912|21357912|21357912|21357912 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X + 21357493 21357618 3'utr sol FlyBase G47825.1 TGTCGCTGTTCGAATCCTGATTTGCATGCGTCTCCTCTCAATTCTACCCGTCTTCTAGTCGATGTTCTGTTAACGAATCACACATTACAGCGAAAAACCCAAAGTTGAAACCAATCAGCATGCGAA 124 21357545 0.985303176 14 119 977 0.965517241 1.526339277 0.390804598 0.298387097 0.5 124 2 4 168 X:21357493-21357618 7 132.5 4942 FBgn0003464 838.5366667 18.14666667 27.72333333 0.158013365 7.301616458 4.77936756 1 1 1 0.1 dme-miR-317-3p 6mer3-8 TGTGTT X 21361347 21361352 + X_21361347_21361352_+ 0.999999918 1 0.999999959 7.07E-08 1-Sep FBtr0077198 21360837 21361688 X + 21361184 21361381 3'utr 1-Sep FlyBase G63439.1 CTTCTATCAAGCGAAACCACACACGAAAACAATTGTATTCCTATTATGTATTTAGACGCGATTAACAATGAATTATTATTGTAATACGCATCTAGGCTAAGCGAATCCAATCCGATTTATATTGTATGTTAATTCATTTTTGTCTGTTTACCTTACCCTTATCTGTGTTGTCTCAAAGCGAGCAATTTATTTAGGTTA 115 21361336 0.990917614 28 107 1107 0.9375 1.829303773 0.215277778 0.208695652 0.368055556 115 8 1 135 X:21361184-21361381 6 1-Sep FBtr0077198 21360837 21361688 TGTGTT 6mer3-8 dme-miR-317-3p X + 21361320 21361370 3'utr 1-Sep FlyBase G47833.1 TTTTTGTCTGTTTACCTTACCCTTATCTGTGTTGTCTCAAAGCGAGCAATT 52 21361336 0.835280442 10 46 498 0.894736842 1.355387658 0.157894737 0.365384615 0.565789474 52 6 2 68 X:21361320-21361370 6 51.5 4943 FBgn0011710 1695 101.9 156.09 0.030383481 0.505397448 0.329937856 11 11 11 0.1 dme-miR-14-3p 6mer3-8 AAGACT X 21361626 21361631 + X_21361626_21361631_+ 0.997378926 0.997883249 0.997631087 0.000356594 1-Sep FBtr0077198 21360837 21361688 X + 21361563 21361654 3'utr 1-Sep FlyBase G63442.1 AGTGCACTCCTTTAACGGATGAAACAAAAACCAAAATGTGAAATCTCTTTTATTATGTATATGAAGACTTTTTTAACTCAATATAATCCTCT 122 21361633 0.782023511 16 117 1052 0.960784314 1.866287339 0.039215686 0.229508197 0.385620915 122 5 1 147 X:21361563-21361654 6 1-Sep FBtr0077198 21360837 21361688 AAGACT 6mer3-8 dme-miR-14-3p X + 21361483 21361646 3'utr 1-Sep FlyBase G47835.1 AAACAGTGATCCCTTCCTAGGCGGTCCCGGGAACCCATGGCCAGTTGCGGAAACTCGGTTTAGCAGGCTACTCGCTTAAAAGTGCACTCCTTTAACGGATGAAACAAAAACCAAAATGTGAAATCTCTTTTATTATGTATATGAAGACTTTTTTAACTCAATAT 84 21361633 0.983699791 21 83 681 0.991452991 2.064457989 0.153846154 0.321428571 0.512820513 84 1 0 116 X:21361483-21361646 6 65.5 4944 FBgn0011710 1695 101.9 156.09 0.038643068 0.642787046 0.419629701 -7 -7 -7 0.1 dme-bantam-3p 6mer3-8 TGATCT X 21372780 21372785 + X_21372780_21372785_+ 0.999788827 0.999771324 0.999780075 1.24E-05 bbx FBtr0100598|FBtr0331745|FBtr0331744|FBtr0100599 21372235|21372235|21372235|21372235 21373145|21373145|21373145|21373145 X + 21372731 21372809 3'utr bbx FlyBase G63465.1 AAGCTATTTGCTGGTGGTGCCCAATGGAGATGGAAAAACAGACATTCGTTGATCTACAATTTAGTCAATAATATTATGT 267 21372780 0.764075045 10 258 2169 0.969512195 2.50242712 0.021341463 0.164794007 0.320121951 267 10 0 318 X:21372731-21372809 6 bbx FBtr0331744|FBtr0100599|FBtr0100598|FBtr0331745 21372235|21372235|21372235|21372235 21373145|21373145|21373145|21373145 TGATCT 6mer3-8 dme-bantam-3p X + 21372739 21372805 3'utr bbx FlyBase G47850.1 TGCTGGTGGTGCCCAATGGAGATGGAAAAACAGACATTCGTTGATCTACAATTTAGTCAATAATATT 214 21372780 0.983319811 8 209 1645 0.98245614 2.225309282 0.035087719 0.406542056 0.628654971 214 5 1 336 X:21372739-21372805 6 235.5 4945 FBgn0024251 1081.59 31.92333333 49.23333333 0.217735001 7.37704918 4.783344617 0 0 0 0.1 dme-miR-305-3p 6mer2-7 TGTGCC X 21384550 21384555 + X_21384550_21384555_+ 0.999879443 0.920462212 0.960170827 0.056156441 slgA FBtr0307529|FBtr0077204|FBtr0307527|FBtr0077207|FBtr0077210|FBtr0307526|FBtr0077206|FBtr0077205|FBtr0307524|FBtr0307525|FBtr0077208|FBtr0077209 21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904 21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159 X + 21384536 21384562 3'utr slgA FlyBase G63473.1 ATTAACTTCGTGATTGTGCCTGTTCCT 9 21384550 0.708698496 4 8 79 1 0.954242509 0 0 0 9 0 0 9 X:21384536-21384562 6 slgA FBtr0077205|FBtr0307524|FBtr0077208|FBtr0307525|FBtr0077209|FBtr0307529|FBtr0077206|FBtr0077204|FBtr0077210|FBtr0077207|FBtr0307527|FBtr0307526 21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904 21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159 TGTGCC 6mer2-7 dme-miR-305-3p X + 21384511 21384573 3'utr slgA FlyBase G47859.1 TATGGCTGCATTTTAGTCTAGATTCATTAACTTCGTGATTGTGCCTGTTCCTCAGTATCAGTT 11 21384551 0.986943706 4 11 100 1 1.278753601 0.210526316 0.363636364 0.631578947 11 0 0 19 X:21384511-21384573 6 9.5 4946 FBgn0003423 397.6533333 14.53333333 22.43333333 0.023890156 0.653669725 0.423476969 0 -1 -0.5 0.1 dme-miR-305-5p 8mer-m1 AGTACAAT X 2148722 2148729 - X_2148722_2148729_- 0.518302701 0.514588856 0.516445778 0.002626053 bcn92 FBtr0070431 2148461 2148765 X - 2148706 2148744 3'utr bcn92 FlyBase G64283.1 GCGCTAGCTGAAGAGAGTACAATAGCAGGGAAGGAGCGG 6 2148722 0.918938909 2 6 15 1 0.84509804 0.714285714 0.166666667 0.285714286 6 0 0 7 X:2148706-2148744 8 bcn92 FBtr0070431 2148461 2148765 AGTACAAT 8mer-m1 dme-miR-305-5p X - 2148703 2148744 3'utr bcn92 FlyBase G48466.1 GCGCTAGCTGAAGAGAGTACAATAGCAGGGAAGGAGCGGTAG 7 2148722 0.989125333 2 7 14 1 0.954242509 0.555555556 0.285714286 0.444444444 7 0 0 9 X:2148703-2148744 8 6 4947 FBgn0013432 536.3433333 92.97666667 143.49 0.011186864 0.06453232 0.041814761 -7 -7 -7 0.1 dme-miR-980-3p 7mer-A1 GCAGCTA X 2150460 2150466 - X_2150460_2150466_- 0.823349562 0.823349562 0.823349562 0 wapl FBtr0070430|FBtr0344159|FBtr0070429 2150105|2149934|2150105 2150876|2150876|2150876 X - 2150437 2150477 3'utr wapl FlyBase G64288.1 AAGCAATATTAGCAGCTAAATGTCGGCTTACCCTCGAAAGC 15 2150449 0.696462347 5 13 78 0.761904762 1.204119983 0 0.333333333 0.523809524 15 5 0 16 X:2150437-2150477 7 wapl FBtr0070430|FBtr0344159|FBtr0070429 2150105|2149934|2150105 2150876|2150876|2150876 GCAGCTA 7mer-A1 dme-miR-980-3p X - 2150437 2150488 3'utr wapl FlyBase G48468.1 TATATAGTCATAAGCAATATTAGCAGCTAAATGTCGGCTTACCCTCGAAAGC 9 2150468 0.954417298 4 9 43 1 1.041392685 0.181818182 0.222222222 0.363636364 9 0 0 11 X:2150437-2150488 7 9.5 4948 FBgn0004655 814.8266667 14.46333333 22.20666667 0.011658921 0.656833372 0.42779946 -17 2 -7.5 0.1 dme-miR-995-5p 6mer3-8 AATTCG X 21609468 21609473 - X_21609468_21609473_- 0.999999994 0.999998956 0.999999475 7.07E-07 CG33502 FBtr0070055 21609355 21609507 X - 21609442 21609481 3'utr CG33502 FlyBase G69494.1 ACGTTGCTAATTCGCTAGTGAAACCAATAGTTAGTTGTAT 5 21609472 0.982349635 3 4 30 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 X:21609442-21609481 6 CG33502 FBtr0070055 21609355 21609507 AATTCG 6mer3-8 dme-miR-995-5p X - 21609386 21609479 3'utr CG33502 FlyBase G52266.1 GTTGCTAATTCGCTAGTGAAACCAATAGTTAGTTGTATACATAACGTACATGTAGTTGATTACTTAAATAAATCTACGGCTTTAAGCTTAACCG 12 21609451 0.980143517 5 11 83 0.958333333 1.361727836 0.208333333 0.666666667 0.833333333 12 1 0 23 X:21609386-21609479 6 6 4949 FBgn0053502 0.98 0.11 0.166666667 6.12244898 54.54545455 36 -1 -22 -11.5 0.1 dme-miR-995-5p 6mer3-8 AATTCG X 21615560 21615565 - X_21615560_21615565_- 1 0.999512976 0.999756488 0.000344361 CG32857 FBtr0070052 21615447 21615599 X - 21615531 21615573 3'utr CG32857 FlyBase G69499.1 ACGTTGCTAATTCGCTAGTGAAACCAATAGTTAGTTGTATACA 8 21615565 0.643737182 6 8 54 1 0.903089987 0.125 0 0 8 0 0 8 X:21615531-21615573 6 CG32857 FBtr0070052 21615447 21615599 AATTCG 6mer3-8 dme-miR-995-5p X - 21615524 21615584 3'utr CG32857 FlyBase G52269.1 TTTCCCTGCTTACGTTGCTAATTCGCTAGTGAAACCAATAGTTAGTTGTATACATAACGTA 7 21615563 0.984990333 3 6 51 0.857142857 1.079181246 0 0.714285714 0.857142857 7 2 0 12 X:21615524-21615584 6 6 4950 FBgn0052857 214.41 24.80666667 37.58333333 0.027983769 0.241870465 0.159645233 0 -2 -1 0.1 dme-miR-995-5p 6mer3-8 AATTCG X 21621652 21621657 - X_21621652_21621657_- 0.999999992 0.999999971 0.999999981 0 CG32500 FBtr0077374 21621539 21621691 X - 21621615 21621669 3'utr CG32500 FlyBase G69504.1 GCTTACGTTGCTAATTCGCTAGTGAAACCAATAGTTAGTTGTATACATAACGTAC 8 21621656 0.98132456 4 8 58 1 1.041392685 0.090909091 0.375 0.545454545 8 0 0 11 X:21621615-21621669 6 CG32500 FBtr0077374 21621539 21621691 AATTCG 6mer3-8 dme-miR-995-5p X - 21621594 21621663 3'utr CG32500 FlyBase G52273.1 GTTGCTAATTCGCTAGTGAAACCAATAGTTAGTTGTATACATAACGTACATGTAGTTGATTACTTAAATA 6 21621635 0.984965601 5 5 46 0.8 0.903089987 0.1 0.333333333 0.6 6 2 0 8 X:21621594-21621663 6 5 4951 FBgn0052500 0 0 0 Inf Inf Inf -1 -22 -11.5 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT X 2172015 2172021 + X_2172015_2172021_+ 0.57998664 0.58404925 0.582017945 0.002872763 CG3630 FBtr0310076|FBtr0310500|FBtr0070385|FBtr0310501 2171927|2171927|2171927|2171927 2172281|2172281|2172281|2172281 X + 2171989 2172027 3'utr CG3630 FlyBase G58268.1 AAAGGAACTCTCGCAACTACTAAAGCGGCAGCTTTAAAT 7 2171999 0.692169268 3 6 27 0.888888889 0.903089987 0 0.285714286 0.444444444 7 1 0 8 X:2171989-2172027 7 CG3630 FBtr0070385|FBtr0310501|FBtr0310076|FBtr0310500 2171927|2171927|2171927|2171927 2172281|2172281|2172281|2172281 GGCAGCT 7mer-m8 dme-miR-980-3p X + 2171988 2172028 3'utr CG3630 FlyBase G44082.1 AAAAGGAACTCTCGCAACTACTAAAGCGGCAGCTTTAAATT 5 2172022 0.958119426 2 4 28 0.8 0.602059991 0 0 0 5 1 0 4 X:2171988-2172028 7 4.5 4952 FBgn0023540 152.6666667 11.14666667 17.14333333 0.029475983 0.403708134 0.262492709 16 -7 4.5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 2205283 2205288 + X_2205283_2205288_+ 0.999998128 0.999893708 0.999945918 7.38E-05 Mct1 FBtr0070393|FBtr0342765 2204927|2204927 2205373|2205373 X + 2205267 2205375 3'utr Mct1 FlyBase G58288.1 ACGTACATGTACCCATACCAAATTATTGTTATTCTATTATGACTGTATGCCTGTGCGTGTGTGTCCGTCTGTGTATGCGCCATTAAAGAAAGCTTTTGTACAACAACAG 123 2205312 0.930149214 23 108 1136 0.884892086 1.788875116 0.302158273 0.113821138 0.215827338 123 15 1 123 X:2205267-2205375 6 Mct1 FBtr0070393|FBtr0342765 2204927|2204927 2205373|2205373 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 2205257 2205376 3'utr Mct1 FlyBase G44099.1 GTATGCCTACACGTACATGTACCCATACCAAATTATTGTTATTCTATTATGACTGTATGCCTGTGCGTGTGTGTCCGTCTGTGTATGCGCCATTAAAGAAAGCTTTTGTACAACAACAGA 61 2205312 0.971370409 18 53 532 0.893617021 1.62324929 0.329787234 0.360655738 0.585106383 61 9 1 84 X:2205257-2205376 6 21 4953 FBgn0023549 120.6466667 4.866666667 7.343333333 0.174061999 4.315068493 2.859736723 -29 -29 -29 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 2237105 2237110 + X_2237105_2237110_+ 0.999985632 0.999982472 0.999984052 2.19E-06 pcx FBtr0342766|FBtr0332381|FBtr0344153 2236594|2236594|2236594 2238045|2238045|2237961 X + 2237064 2237159 3'utr pcx FlyBase G58318.1 AATTGTTGTAACTTGCGAATTGTATAATATGGAAACGGAAAACCAAATGCTTCTCAAACATTACCTATTTTGTTCTTTCTCCTCTCGCTAGCCAAT 24 2237111 0.969194783 7 23 142 1 1.505149978 0.03125 0.304347826 0.5 23 0 0 32 X:2237064-2237159 6 pcx FBtr0344153|FBtr0342766|FBtr0332381 2236594|2236594|2236594 2237961|2238045|2238045 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 2237099 2237133 3'utr pcx FlyBase G44115.1 CGGAAAACCAAATGCTTCTCAAACATTACCTATTT 11 2237111 0.972720594 3 10 54 0.866666667 1.113943352 0.266666667 0.272727273 0.466666667 11 2 0 13 X:2237099-2237133 6 12 4954 FBgn0003048 2230.713333 22.34666667 34.36666667 0.005379445 0.53699284 0.349175558 -6 -6 -6 0.1 dme-miR-14-3p 7mer-A1 AGACTGA X 2237462 2237468 + X_2237462_2237468_+ 0.823348678 0.823348801 0.823348739 7.07E-08 pcx FBtr0342766|FBtr0332381|FBtr0344153 2236594|2236594|2236594 2238045|2238045|2237961 X + 2237358 2237517 3'utr pcx FlyBase G58321.1 CTAAGATATTACACACAATTCCTAGATGATTAAGAGGATGAGGATGAGGACGAGGATCAAGTGGAATGACGACATGTAAAGCTCTCACGTTGCCTTAATATATTAGACTGATTTTTTCTACACACATTTGTAGACGTATGGTGGATGACATTTGAGAAGT 305 2237460 0.992172243 30 298 3345 0.977591036 2.241795431 0.019607843 0.144262295 0.268907563 305 7 1 349 X:2237358-2237517 7 pcx FBtr0344153|FBtr0342766|FBtr0332381 2236594|2236594|2236594 2237961|2238045|2238045 AGACTGA 7mer-A1 dme-miR-14-3p X + 2237398 2237514 3'utr pcx FlyBase G44118.1 AGGATGAGGACGAGGATCAAGTGGAATGACGACATGTAAAGCTCTCACGTTGCCTTAATATATTAGACTGATTTTTTCTACACACATTTGTAGACGTATGGTGGATGACATTTGAGA 142 2237460 0.991576035 18 137 1481 0.97235023 2.02325246 0.02764977 0.366197183 0.585253456 142 5 1 211 X:2237398-2237514 7 194.5 4955 FBgn0003048 2230.713333 22.34666667 34.36666667 0.08719184 8.70375895 5.659553831 2 2 2 0.1 dme-miR-1012-3p 6mer3-8 TTGACT X 22447570 22447575 - X_22447570_22447575_- 0.9870779 0.976129469 0.981603685 0.007741688 CG14615 FBtr0339499 22447181 22447925 X - 22447543 22447583 3'utr CG14615 FlyBase G69539.1 ACGCACTTTTGACTGAATCAAATTTGACATTTTCGAGTTAA 7 22447560 0.775937663 3 6 46 0.9 0.954242509 0.1 0.428571429 0.6 7 1 0 9 X:22447543-22447583 6 CG14615 FBtr0339499 22447181 22447925 TTGACT 6mer3-8 dme-miR-1012-3p X - 22447534 22447589 3'utr CG14615 FlyBase G52298.1 TATATTACGCACTTTTGACTGAATCAAATTTGACATTTTCGAGTTAATTAGCTAAA 16 22447576 0.984620951 5 14 115 0.913043478 1.322219295 0.130434783 0.25 0.47826087 16 2 0 21 X:22447534-22447589 6 9.5 4956 FBgn0031184 46.76333333 3.326666667 5.086666667 0.203150617 2.855711423 1.867627785 -15 1 -7 0.1 dme-miR-33-5p 8mer-A1 CAATGCAA X 22447609 22447616 + X_22447609_22447616_+ 0.604373051 0.625906874 0.615139963 0.015226696 CG14621 FBtr0339557 22446988 22447808 X + 22447562 22447635 3'utr CG14621 FlyBase G63513.1 TTTGATTCAGTCAAAAGTGCGTAATATATGTATATATACCTAGAATGCAATGCAATGCTGTAAATAAAATGTAT 14 22447617 0.890200114 5 12 104 0.928571429 1.113943352 0.214285714 0 0 14 1 0 13 X:22447562-22447635 8 CG14621 FBtr0339557 22446988 22447808 CAATGCAA 8mer-A1 dme-miR-33-5p X + 22447549 22447626 3'utr CG14621 FlyBase G47882.1 CGAAAATGTCAAATTTGATTCAGTCAAAAGTGCGTAATATATGTATATATACCTAGAATGCAATGCAATGCTGTAAAT 13 22447608 0.974828724 7 12 76 1 1.380211242 0.208333333 0.461538462 0.708333333 13 0 0 24 X:22447549-22447626 8 9 4957 FBgn0031183 252.9033333 14.79333333 22.64 0.03558672 0.608382154 0.397526502 -8 1 -3.5 0.1 dme-miR-1007-3p 8mer-A1 TGAGCTTA X 2244821 2244828 + X_2244821_2244828_+ 0.625361005 0.625363339 0.625362172 1.63E-06 fs(1)K10 FBtr0070396 2244551 2246041 X + 2244791 2244828 3'utr fs(1)K10 FlyBase G58328.1 TTGTCACACGTTGCTTTTGCGACTGAGAACTGAGCTTA 5 2244814 0.955687275 2 5 41 1 0.698970004 0 0 0 5 0 0 5 X:2244791-2244828 8 fs(1)K10 FBtr0070396 2244551 2246041 TGAGCTTA 8mer-A1 dme-miR-1007-3p X + 2244798 2244832 3'utr fs(1)K10 FlyBase G44119.1 ACGTTGCTTTTGCGACTGAGAACTGAGCTTAGAAC 8 2244812 0.817967302 3 6 45 0.666666667 0.903089987 0 0.375 0.583333333 8 4 0 8 X:2244798-2244832 8 5.5 4958 FBgn0000810 232.2533333 9.176666667 14.05666667 0.023681038 0.599346168 0.391273417 7 9 8 0.1 dme-miR-965-3p 6mer3-8 TACGCT X 22451815 22451820 - X_22451815_22451820_- 0.544333136 1 0.772166568 0.322205155 wap FBtr0309240|FBtr0339498|FBtr0305147 22451554|22451443|22451554 22453229|22453229|22453229 X - 22451767 22451881 3'utr wap FlyBase G69543.1 TGCTGCAGAAGAGTAAGAAACTGAAATCAAGTCTATGGAATTTGGAATTGGATATATTTTATACGCTCGTAGCCACTAGGCGAAGACATTTTCATTAATTTGGCAAACCACGGTT 10 22451850 0.970980085 9 10 63 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 X:22451767-22451881 6 wap FBtr0305147|FBtr0309240|FBtr0339498 22451554|22451554|22451443 22453229|22453229|22453229 TACGCT 6mer3-8 dme-miR-965-3p X - 22451779 22451866 3'utr wap FlyBase G52301.1 AGAAACTGAAATCAAGTCTATGGAATTTGGAATTGGATATATTTTATACGCTCGTAGCCACTAGGCGAAGACATTTTCATTAATTTGG 6 22451812 0.97146742 6 6 46 1 0.954242509 0.333333333 0.5 0.666666667 6 0 0 9 X:22451779-22451866 6 3 4959 FBgn0266848 2356.2 87.30666667 134.59 0.001273237 0.034361637 0.022289918 30 -8 11 0.1 dme-miR-184-5p 7mer-A1 GATAAGA X 22452192 22452198 - X_22452192_22452198_- 0.782911792 0.782911824 0.782911808 0 wap FBtr0309240|FBtr0339498|FBtr0305147|FBtr0077368 22451554|22451443|22451554|22451998 22453229|22453229|22453229|22453229 X - 22452164 22452222 3'utr wap FlyBase G69546.1 AGCAAACAAACTATGATCATTTCAGATAAGACACGACCCTCCATCAATAATCTCAAATC 10 22452209 0.965462633 5 10 53 1 1.079181246 0.083333333 0.2 0.333333333 10 0 0 12 X:22452164-22452222 7 wap FBtr0305147|FBtr0077368|FBtr0309240|FBtr0339498 22451554|22451998|22451554|22451443 22453229|22453229|22453229|22453229 GATAAGA 7mer-A1 dme-miR-184-5p X - 22452164 22452219 3'utr wap FlyBase G52303.1 AAACAAACTATGATCATTTCAGATAAGACACGACCCTCCATCAATAATCTCAAATC 6 22452209 0.973455655 5 6 34 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 X:22452164-22452219 7 5 4960 FBgn0266848 2356.2 87.30666667 134.59 0.002122061 0.057269395 0.037149863 11 11 11 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA X 22452358 22452363 - X_22452358_22452363_- 0.999711942 0.999999956 0.999855949 0.000203717 wap FBtr0309240|FBtr0339498|FBtr0305147|FBtr0077368 22451554|22451443|22451554|22451998 22453229|22453229|22453229|22453229 X - 22452334 22452419 3'utr wap FlyBase G69548.1 AAAGAAATAAGCGAAATACTTACATAGATTAAAGATTAAAAACCAAACCAGGAAACTGATGACGAACTGCACACAACACAGCTAGA 6 22452360 0.864535792 5 5 19 1 0.77815125 0.166666667 0 0 6 0 0 6 X:22452334-22452419 6 wap FBtr0305147|FBtr0077368|FBtr0309240|FBtr0339498 22451554|22451998|22451554|22451443 22453229|22453229|22453229|22453229 TGATGA 6mer3-8 dme-miR-2a-2-5p X - 22452341 22452370 3'utr wap FlyBase G52305.1 AGGAAACTGATGACGAACTGCACACAACAC 5 22452361 0.750575869 3 5 10 1 1 0 0.4 0.7 5 0 0 10 X:22452341-22452370 6 4 4961 FBgn0266848 2356.2 87.30666667 134.59 0.001697649 0.045815516 0.02971989 -3 -2 -2.5 0.1 dme-miR-282-5p 6mer3-8 AGAGGC X 22452983 22452988 - X_22452983_22452988_- 0.998977463 0.985625678 0.99230157 0.009441148 wap FBtr0309240|FBtr0339498|FBtr0305147|FBtr0077368 22451554|22451443|22451554|22451998 22453229|22453229|22453229|22453229 X - 22452959 22453024 3'utr wap FlyBase G69551.1 CTGTCGAGAGAGAGAAAATGTGAAAGTGACGGATATAGAGGCAGAGAAATGGAAAGAGAAAGGGCT 32 22452989 0.913808049 6 30 85 0.911764706 1.190331698 0.294117647 0.0625 0.117647059 32 2 1 31 X:22452959-22453024 6 wap FBtr0305147|FBtr0077368|FBtr0309240|FBtr0339498 22451554|22451998|22451554|22451443 22453229|22453229|22453229|22453229 AGAGGC 6mer3-8 dme-miR-282-5p X - 22452955 22453028 3'utr wap FlyBase G52308.1 CTGTCTGTCGAGAGAGAGAAAATGTGAAAGTGACGGATATAGAGGCAGAGAAATGGAAAGAGAAAGGGCTTAAA 13 22452989 0.929353033 8 12 41 0.9375 1.176091259 0.375 0.153846154 0.3125 13 1 0 15 X:22452955-22453028 6 13.5 4962 FBgn0266848 2356.2 87.30666667 134.59 0.005729565 0.154627367 0.100304629 1 1 1 0.1 dme-miR-14-3p 6mer3-8 AAGACT X 2245896 2245901 + X_2245896_2245901_+ 0.99999997 0.999999997 0.999999983 0 fs(1)K10 FBtr0070396 2244551 2246041 X + 2245852 2245917 3'utr fs(1)K10 FlyBase G58331.1 AACCCTCAGGTAGCAAAGTAATTTAATTGCAAATAGAGAGTCCTAAGACTAAATAATATATTTAAA 23 2245894 0.856266736 6 16 146 0.730769231 0.801632346 0 0.130434783 0.230769231 23 5 2 19 X:2245852-2245917 6 fs(1)K10 FBtr0070396 2244551 2246041 AAGACT 6mer3-8 dme-miR-14-3p X + 2245876 2245908 3'utr fs(1)K10 FlyBase G44121.1 AATTGCAAATAGAGAGTCCTAAGACTAAATAAT 11 2245895 0.732514331 3 7 60 0.692307692 0.954242509 0 0.181818182 0.307692308 11 4 0 9 X:2245876-2245908 6 15.5 4963 FBgn0000810 232.2533333 9.176666667 14.05666667 0.066737471 1.689066473 1.10267963 2 1 1.5 0.1 dme-miR-7-5p 6mer3-8 GTCTTC X 22467461 22467466 + X_22467461_22467466_+ 0.999754179 0.999278345 0.999516262 0.000336512 CG14619 FBtr0339508 22466192 22468475 X + 22467407 22467532 3'utr CG14619 FlyBase G63529.1 CGGTAACACCAGCGTCACCTTTGATCCGTTCTGGGATCTGAGTGTACCGTTGCCGTCTTCGTCCCGCTGCAAGCTAGAAGCTTGCCTCGACCTCTTTATCCGCGAAGAGGTCCTTGACGGCGACGA 14 22467464 0.959720941 10 14 71 1 1.255272505 0.277777778 0.285714286 0.444444444 14 0 0 18 X:22467407-22467532 6 CG14619 FBtr0339508 22466192 22468475 GTCTTC 6mer3-8 dme-miR-7-5p X + 22467416 22467481 3'utr CG14619 FlyBase G47889.1 CAGCGTCACCTTTGATCCGTTCTGGGATCTGAGTGTACCGTTGCCGTCTTCGTCCCGCTGCAAGCT 8 22467464 0.97667182 6 7 48 1 1.113943352 0.230769231 0.5 0.692307692 8 0 0 13 X:22467416-22467481 6 5 4964 FBgn0031187 1740.476667 50.81666667 78.19 0.002872776 0.098392916 0.063946796 -3 -3 -3 0.1 dme-miR-79-3p 6mer2-7 AGCTTT X 22469006 22469011 + X_22469006_22469011_+ 0.755285222 0.695263292 0.725274257 0.042441893 CG14619 FBtr0339506 22468183 22470146 X + 22468981 22469026 3'utr CG14619 FlyBase G63532.1 AAATATCTCCATAGCTAAGGGAAAAAGCTTTTTAGCAACTAAAATA 23 22469012 0.654873826 4 23 125 1 1.397940009 0 0.086956522 0.16 23 0 0 25 X:22468981-22469026 6 CG14619 FBtr0339506 22468183 22470146 AGCTTT 6mer2-7 dme-miR-79-3p X + 22468991 22469035 3'utr CG14619 FlyBase G47890.1 ATAGCTAAGGGAAAAAGCTTTTTAGCAACTAAAATAAAAAGTAAT 21 22469012 0.841619804 3 21 104 1 1.447158031 0.035714286 0.238095238 0.428571429 21 0 0 28 X:22468991-22469035 6 21.5 4965 FBgn0031187 1740.476667 50.81666667 78.19 0.012352938 0.423089538 0.274971224 -6 -6 -6 0.1 dme-miR-932-5p 6mer2-7 GAATTG X 22469100 22469105 + X_22469100_22469105_+ 0.883403573 0.999915677 0.941659625 0.082386496 CG14619 FBtr0339506 22468183 22470146 X + 22469088 22469137 3'utr CG14619 FlyBase G63533.1 AAGCTGAAATCTGAATTGTGAAAACGTACTTATGATAATTGCTAGTAGTA 10 22469103 0.721658443 4 9 64 1 1.113943352 0.230769231 0.3 0.461538462 10 0 0 13 X:22469088-22469137 6 CG14619 FBtr0339506 22468183 22470146 GAATTG 6mer2-7 dme-miR-932-5p X + 22469074 22469149 3'utr CG14619 FlyBase G47891.1 GGGGCCGCGAAGTGAAGCTGAAATCTGAATTGTGAAAACGTACTTATGATAATTGCTAGTAGTACAATTTAAAAAA 9 22469103 0.977015606 4 9 56 1 1.146128036 0.214285714 0.555555556 0.714285714 9 0 0 14 X:22469074-22469149 6 6.5 4966 FBgn0031187 1740.476667 50.81666667 78.19 0.003734609 0.12791079 0.083130835 -3 -3 -3 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC X 22469378 22469383 + X_22469378_22469383_+ 0.890004381 0.999542357 0.944773369 0.077455063 CG14619 FBtr0339506 22468183 22470146 X + 22469365 22469404 3'utr CG14619 FlyBase G63534.1 AAAGCTACCAAAACTAGTCTCAAAGAAGAAAGGTTTACAT 6 22469384 0.933177455 2 6 24 1 0.903089987 0.5 0.333333333 0.5 6 0 0 8 X:22469365-22469404 6 CG14619 FBtr0339506 22468183 22470146 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" X + 22469365 22469399 3'utr CG14619 FlyBase G47892.1 AAAGCTACCAAAACTAGTCTCAAAGAAGAAAGGTT 6 22469384 0.907863915 2 6 20 1 1 0.6 0.5 0.7 6 0 0 10 X:22469365-22469399 6 6 4967 FBgn0031187 1740.476667 50.81666667 78.19 0.003447331 0.118071499 0.076736156 -6 -6 -6 0.1 dme-miR-980-5p 7mer-A1 AAAAACA X 22474911 22474917 - X_22474911_22474917_- 0.782163136 0.781738685 0.78195091 0.000300096 CG12576 FBtr0077366|FBtr0346429|FBtr0077365|FBtr0335046 22474849|22474849|22474849|22474849 22475730|22475730|22475730|22475730 X - 22474904 22474996 3'utr CG12576 FlyBase G69567.1 TTGTATTCTTATTATTATTTGCGCTTAAAATACATAAGTTATCATTTAAATTGCGAAACAAAACGAAATGTGATTTTGTAAAAACAAAAACTG 95 22474922 0.894943606 13 92 605 0.991869919 2.086359831 0.18699187 0.252631579 0.422764228 95 1 0 122 X:22474904-22474996 7 CG12576 FBtr0335046|FBtr0077365|FBtr0346429|FBtr0077366 22474849|22474849|22474849|22474849 22475730|22475730|22475730|22475730 AAAAACA 7mer-A1 dme-miR-980-5p X - 22474903 22474992 3'utr CG12576 FlyBase G52319.1 ATTCTTATTATTATTTGCGCTTAAAATACATAAGTTATCATTTAAATTGCGAAACAAAACGAAATGTGATTTTGTAAAAACAAAAACTGA 62 22474922 0.964621739 7 60 382 0.989583333 1.977723605 0.15625 0.387096774 0.604166667 62 1 0 95 X:22474903-22474992 7 32.5 4968 FBgn0031190 668.0366667 33.82666667 51.78333333 0.048650024 0.960780449 0.627615063 5 5 5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 2252557 2252562 - X_2252557_2252562_- 0.503158657 0.637337019 0.570247838 0.094878386 CG3091 FBtr0342767|FBtr0342767|FBtr0342767|FBtr0070416|FBtr0070416|FBtr0070416 2252330|2252330|2252330|2252330|2252330|2252330 2252595|2252595|2252595|2252595|2252595|2252595 X - 2252458 2252599 stop_codon CG3091 FlyBase G64359.1 CTGATATCCTGATCATCGAACGTGATATAAACATAAATGTGATCAAGCATCGCGTCTTGCCAAGCGAAGATATCGATTAGTTGGGAAAGTCCCAGAAACACTTACAGGTTCTAGAGCTCAGTGAAGCTGGCCCTCCATTAAG 155 2252572 0.805095617 21 142 867 0.898395722 1.62324929 0.417112299 0.15483871 0.299465241 155 16 3 168 X:2252458-2252599 6 CG3091 FBtr0342767|FBtr0342767|FBtr0342767|FBtr0070416|FBtr0070416|FBtr0070416 2252330|2252330|2252330|2252330|2252330|2252330 2252595|2252595|2252595|2252595|2252595|2252595 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 2252454 2252598 stop_codon CG3091 FlyBase G48507.1 TGATATCCTGATCATCGAACGTGATATAAACATAAATGTGATCAAGCATCGCGTCTTGCCAAGCGAAGATATCGATTAGTTGGGAAAGTCCCAGAAACACTTACAGGTTCTAGAGCTCAGTGAAGCTGGCCCTCCATTAAGAATT 108 2252572 0.793880636 18 92 597 0.853333333 1.329058719 0.44 0.314814815 0.506666667 108 17 5 128 X:2252454-2252598 6 90 4969 FBgn0029608 227.6666667 23.33 35.96333333 0.395314788 3.857693956 2.502548892 10 10 10 0.1 dme-miR-277-3p 6mer3-8 TGCATT X 22536228 22536233 - X_22536228_22536233_- 0.984835564 0.999999997 0.99241778 0.01072285 CG17598 FBtr0333716 22534829 22536860 X - 22536214 22536262 3'utr CG17598 FlyBase G69583.1 CGTTCTATTCTGTAGAAGCGAAATTTCAGTGCATTATATTATATTTTAA 50 22536239 0.851175406 5 49 456 0.980769231 1.707570176 0.230769231 0.04 0.076923077 50 1 0 51 X:22536214-22536262 6 CG17598 FBtr0333716 22534829 22536860 TGCATT 6mer3-8 dme-miR-277-3p X - 22536211 22536267 3'utr CG17598 FlyBase G52329.1 GTTAACGTTCTATTCTGTAGAAGCGAAATTTCAGTGCATTATATTATATTTTAAAAT 35 22536239 0.797276473 9 35 288 1 1.72427587 0.320754717 0.342857143 0.566037736 35 0 0 53 X:22536211-22536267 6 41.5 4970 FBgn0031194 238.9466667 10.09 15.33666667 0.173678924 4.112983152 2.705933493 6 6 6 0.1 dme-miR-34-5p 7mer-m8 CACTGCC X 2265654 2265660 - X_2265654_2265660_- 0.708946624 0.708951476 0.70894905 3.46E-06 CG2924 FBtr0345315|FBtr0346648|FBtr0070412|FBtr0300793 2264989|2264655|2264989|2264989 2265784|2265784|2265784|2265784 X - 2265639 2265711 3'utr CG2924 FlyBase G64367.1 CACACCGCCAAAATTAGCCTGTCCACATCCGCCAAGCACACATCCCGCACTCACTGCCGGCTTGATCTGATAT 13 2265661 0.945534193 3 13 55 1 1.146128036 0 0.076923077 0.142857143 13 0 0 14 X:2265639-2265711 7 CG2924 FBtr0070412|FBtr0300793|FBtr0345315|FBtr0346648 2264989|2264989|2264989|2264655 2265784|2265784|2265784|2265784 CACTGCC 7mer-m8 dme-miR-34-5p X - 2265642 2265674 3'utr CG2924 FlyBase G48513.1 ACACATCCCGCACTCACTGCCGGCTTGATCTGA 6 2265661 0.851107621 2 5 28 0.666666667 0.77815125 0 0.333333333 0.555555556 6 3 0 6 X:2265642-2265674 7 7 4971 FBgn0023528 1233.12 56.31666667 86.87 0.005676658 0.124297129 0.080580177 1 1 1 0.1 dme-bantam-3p 6mer3-8 TGATCT X 2271138 2271143 - X_2271138_2271143_- 0.997229371 0.997009129 0.99711925 0.000155776 CG2918 FBtr0300792 2271006 2271490 X - 2271120 2271236 3'utr CG2918 FlyBase G64374.1 ATTTTCCATTTCCATACCATTCCGCATAGGAAATACAAGACTTGAAGAAGTACTCACACGGTCCCCTCTATATGTATATCCACTATATCTTATTGATCTATTGTAGCGAAAGTAGCG 60 2271143 0.877547231 14 54 437 0.916666667 1.51851394 0.069444444 0.116666667 0.263888889 60 5 1 66 X:2271120-2271236 6 CG2918 FBtr0300792 2271006 2271490 TGATCT 6mer3-8 dme-bantam-3p X - 2271081 2271165 3'utr CG2918 FlyBase G48517.1 ATGTATATCCACTATATCTTATTGATCTATTGTAGCGAAAGTAGCGAAACGAATTGGGCGGGATGAGTTAATTGCCGAGATAAGA 29 2271143 0.992766432 6 24 271 0.871794872 0.832508913 0.025641026 0.24137931 0.435897436 29 1 4 34 X:2271081-2271165 6 26.5 4972 FBgn0023529 3854.556667 145.7 223.8466667 0.00687498 0.181880577 0.118384609 0 0 0 0.1 dme-miR-14-3p 6mer3-8 AAGACT X 2271195 2271200 - X_2271195_2271200_- 0.755678419 0.967072814 0.861375617 0.149478414 CG2918 FBtr0300792 2271006 2271490 X - 2271120 2271236 3'utr CG2918 FlyBase G64374.1 ATTTTCCATTTCCATACCATTCCGCATAGGAAATACAAGACTTGAAGAAGTACTCACACGGTCCCCTCTATATGTATATCCACTATATCTTATTGATCTATTGTAGCGAAAGTAGCG 60 2271203 0.877547231 14 54 437 0.916666667 1.51851394 0.069444444 0.116666667 0.263888889 60 5 1 66 X:2271120-2271236 6 CG2918 FBtr0300792 2271006 2271490 AAGACT 6mer3-8 dme-miR-14-3p X - 2271188 2271236 3'utr CG2918 FlyBase G48518.1 ATTTTCCATTTCCATACCATTCCGCATAGGAAATACAAGACTTGAAGAA 15 2271203 0.949128135 4 12 55 0.826086957 1.278753601 0.043478261 0.466666667 0.652173913 15 4 0 19 X:2271188-2271236 6 17.5 4973 FBgn0023529 3854.556667 145.7 223.8466667 0.004540081 0.120109815 0.078178515 3 3 3 0.1 dme-miR-190-5p 6mer3-8 ACATAT X 2279564 2279569 - X_2279564_2279569_- 0.995848612 1 0.997924306 0.002935483 CG2865 FBtr0332962 2278029 2281577 X - 2279520 2279587 3'utr CG2865 FlyBase G64390.1 ATTATAGTTTATATTCCTACATATGCAGACTACATGGATGAACCAATATACCAATATACATTATACAT 34 2279564 0.863360146 6 32 227 0.945945946 1.544068044 0.027027027 0.088235294 0.162162162 34 2 0 35 X:2279520-2279587 6 CG2865 FBtr0332962 2278029 2281577 ACATAT 6mer3-8 dme-miR-190-5p X - 2279542 2279582 3'utr CG2865 FlyBase G48529.1 AGTTTATATTCCTACATATGCAGACTACATGGATGAACCAA 14 2279564 0.676101321 5 12 64 0.875 0.84509804 0.083333333 0.428571429 0.666666667 14 1 2 21 X:2279542-2279582 6 20.5 4974 FBgn0023526 330.04 10.34 15.85333333 0.062113683 1.982591876 1.293103448 -5 -5 -5 0.1 dme-miR-1008-3p 7mer-A1 GCTGTGA X 2280400 2280406 - X_2280400_2280406_- 0.692329539 0.751657711 0.721993625 0.041951373 CG2865 FBtr0332962 2278029 2281577 X - 2280371 2280432 3'utr CG2865 FlyBase G64396.2 AAATTTTTTCTTCGAAAAAAATTACGGCTGTGATAGAATTTTAAGTTTTTGGCTAAACAAAA 196 2280410 0.776511659 16 157 1700 0.814814815 1.291270158 0.268518519 0.102040816 0.185185185 196 32 8 176 X:2280371-2280432 7 CG2865 FBtr0332962 2278029 2281577 GCTGTGA 7mer-A1 dme-miR-1008-3p X - 2280364 2280429 3'utr CG2865 FlyBase G48532.1 TTTTTTCTTCGAAAAAAATTACGGCTGTGATAGAATTTTAAGTTTTTGGCTAAACAAAAAAAGAAG 158 2280411 0.989003778 15 135 1352 0.882629108 1.672097858 0.248826291 0.259493671 0.450704225 158 22 3 188 X:2280364-2280429 7 173.5 4975 FBgn0023526 330.04 10.34 15.85333333 0.525693855 16.7794971 10.94407065 4 5 4.5 0.1 dme-miR-33-5p 8mer-A1 CAATGCAA X 2280802 2280809 - X_2280802_2280809_- 0.634552229 0.634552211 0.63455222 0 CG2865 FBtr0332962 2278029 2281577 X - 2280789 2280827 3'utr CG2865 FlyBase G64400.1 AAACAAAAAAAAAACAAACAATGCAAGGTTTCATTTATT 50 2280806 0.922489444 3 49 172 1 1.785329835 0 0.1 0.262295082 50 0 0 61 X:2280789-2280827 8 CG2865 FBtr0332962 2278029 2281577 CAATGCAA 8mer-A1 dme-miR-33-5p X - 2280790 2280826 3'utr CG2865 FlyBase G48534.1 AACAAAAAAAAAACAAACAATGCAAGGTTTCATTTAT 30 2280806 0.915976108 2 29 98 0.976744186 1.62324929 0 0.333333333 0.534883721 30 1 0 42 X:2280790-2280826 8 39.5 4976 FBgn0023526 330.04 10.34 15.85333333 0.119682463 3.820116054 2.491589571 -3 -3 -3 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA X 2280908 2280914 - X_2280908_2280914_- 0.823349559 0.823345253 0.823347406 3.04E-06 CG2865 FBtr0332962 2278029 2281577 X - 2280899 2280932 3'utr CG2865 FlyBase G64401.1 AAAACCTCCGAAGTTCTCCTAGTCATACAAAAAA 7 2280916 0.624495836 4 7 38 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 X:2280899-2280932 7 CG2865 FBtr0332962 2278029 2281577 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X - 2280902 2280929 3'utr CG2865 FlyBase G48535.1 ACCTCCGAAGTTCTCCTAGTCATACAAA 5 2280907 0.92735952 2 5 27 1 0.903089987 0.25 0.4 0.625 5 0 0 8 X:2280902-2280929 7 6 4977 FBgn0023526 330.04 10.34 15.85333333 0.018179615 0.580270793 0.378469302 2 -7 -2.5 0.1 dme-miR-305-5p 7mer-A1 GTACAAA X 2281375 2281381 - X_2281375_2281381_- 0.782910576 0.782910271 0.782910424 2.12E-07 CG2865 FBtr0332962 2278029 2281577 X - 2281340 2281456 3'utr CG2865 FlyBase G64402.1 ATTATTATATAGGAAGGAGCAGGAAGATGATCGGGCGGATTGGCCAGTATTACTCATTAATGGCAGTCGCGATTTGTACAAACAAAAATACACAAAAAATTAGTTGTAGGCAATTGA 92 2281383 0.968749913 18 86 476 0.940594059 1.375663614 0.188118812 0.086956522 0.168316832 92 3 3 95 X:2281340-2281456 7 CG2865 FBtr0332962 2278029 2281577 GTACAAA 7mer-A1 dme-miR-305-5p X - 2281346 2281499 3'utr CG2865 FlyBase G48537.1 AAGCGAACATTTAGGCTATGACCCATATGCTAATCTCTAAGCTATTATTATATAGGAAGGAGCAGGAAGATGATCGGGCGGATTGGCCAGTATTACTCATTAATGGCAGTCGCGATTTGTACAAACAAAAATACACAAAAAATTAGTTGTAGGC 70 2281383 0.957083362 14 68 329 0.98245614 1.748188027 0.228070175 0.428571429 0.649122807 70 1 1 112 X:2281346-2281499 7 51 4978 FBgn0023526 330.04 10.34 15.85333333 0.154526724 4.932301741 3.216989066 2 2 2 0.1 dme-miR-277-3p 6mer2-7 GCATTT X 22826469 22826474 - X_22826469_22826474_- 0.999999999 0.999999653 0.999999826 2.12E-07 fog FBtr0333180|FBtr0100538|FBtr0333179|FBtr0077342|FBtr0333182|FBtr0333181 22826160|22826160|22826160|22826160|22824315|22826160 22827046|22827046|22827046|22827046|22827046|22827046 X - 22826458 22826505 3'utr fog FlyBase G69600.2 AACTCATATATTCATTGTGCGTACAGTCTGAGCATTTGTTGTATATAC 31 22826485 0.75052404 9 25 213 0.897435897 1.544068044 0.179487179 0.258064516 0.41025641 31 4 0 35 X:22826458-22826505 6 fog FBtr0333182|FBtr0333181|FBtr0333179|FBtr0077342|FBtr0333180|FBtr0100538 22824315|22826160|22826160|22826160|22826160|22826160 22827046|22827046|22827046|22827046|22827046|22827046 GCATTT 6mer2-7 dme-miR-277-3p X - 22826449 22826525 3'utr fog FlyBase G52343.1 ACTACTATTATTACCATTGTAACTCATATATTCATTGTGCGTACAGTCTGAGCATTTGTTGTATATACATTAGTGAA 21 22826485 0.776502947 11 20 164 0.962962963 1.414973348 0.185185185 0.238095238 0.407407407 21 1 0 26 X:22826449-22826525 6 21 4979 FBgn0000719 1767.816667 49.34333333 75.43666667 0.01187906 0.425589408 0.278379214 11 11 11 0.1 dme-miR-308-3p 7mer-m1 TGTGATT X 22826605 22826611 - X_22826605_22826611_- 0.516543973 0.515855722 0.516199847 0.000486702 fog FBtr0333180|FBtr0100538|FBtr0333179|FBtr0077342|FBtr0333182|FBtr0333181 22826160|22826160|22826160|22826160|22824315|22826160 22827046|22827046|22827046|22827046|22827046|22827046 X - 22826565 22826674 3'utr fog FlyBase G69601.2 ACATTACAATAGTTTTATATGTGAGCGCTGCTGTCGCTGTTGCGAGCCTTAGCAATATTTCATTGTGATTACTTAGGCATATGAATTGATCGTTAGACTTAGGAAATCTT 402 22826612 0.878730335 28 349 4105 0.877083333 1.177124064 0.0625 0.167082294 0.304166667 401 32 27 421 X:22826565-22826674 7 fog FBtr0333182|FBtr0333181|FBtr0333179|FBtr0077342|FBtr0333180|FBtr0100538 22824315|22826160|22826160|22826160|22826160|22826160 22827046|22827046|22827046|22827046|22827046|22827046 TGTGATT 7mer-m1 dme-miR-308-3p X - 22826530 22826671 3'utr fog FlyBase G52344.1 TTACAATAGTTTTATATGTGAGCGCTGCTGTCGCTGTTGCGAGCCTTAGCAATATTTCATTGTGATTACTTAGGCATATGAATTGATCGTTAGACTTAGGAAATCTTATTTGTATATCCAGAATCTTTTGATGTATCTTTTT 235 22826612 0.744487624 30 212 2291 0.904494382 1.604765885 0.084269663 0.395744681 0.601123596 235 27 7 322 X:22826530-22826671 7 253 4980 FBgn0000719 1767.816667 49.34333333 75.43666667 0.143114388 5.127339053 3.353806725 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 23012360 23012366 - X_23012360_23012366_- 0.801967783 0.801968468 0.801968125 4.95E-07 Rab21 FBtr0299903|FBtr0299903|FBtr0299903|FBtr0336924|FBtr0336924|FBtr0336924|FBtr0111134|FBtr0111134|FBtr0111134 23012138|23012138|23012138|23012138|23012138|23012138|23012138|23012138|23012138 23012376|23012376|23012376|23012376|23012376|23012376|23012376|23012376|23012376 X - 23012343 23012415 stop_codon Rab21 FlyBase G69625.1 GGAGATCCTGCGGGCCAGCGGTCCTGTTGCGGCATTTAGCCGTTCCCATTGTGATAGTAATCATAACTATAAA 97 23012367 0.740996206 12 90 684 0.919354839 1.278753601 0.088709677 0.237113402 0.403225806 97 5 5 114 X:23012343-23012415 7 Rab21 FBtr0111134|FBtr0111134|FBtr0111134|FBtr0336924|FBtr0336924|FBtr0336924|FBtr0299903|FBtr0299903|FBtr0299903 23012138|23012138|23012138|23012138|23012138|23012138|23012138|23012138|23012138 23012376|23012376|23012376|23012376|23012376|23012376|23012376|23012376|23012376 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 23012292 23012416 stop_codon Rab21 FlyBase G52364.1 CGGAGATCCTGCGGGCCAGCGGTCCTGTTGCGGCATTTAGCCGTTCCCATTGTGATAGTAATCATAACTATAAAATAGTAGACCTTTAACCGATGTTGATCTTGTGTATATATTATACATAGATA 94 23012367 0.977557566 19 89 737 0.961538462 1.397940009 0.084615385 0.319148936 0.507692308 94 1 4 125 X:23012292-23012416 7 69 4981 FBgn0039966 49 5.726666667 8.77 1.408163265 12.04889406 7.867730901 1 1 1 0.1 dme-bantam-3p 8mer-A1 TGATCTCA X 23080962 23080969 - X_23080962_23080969_- 0.631136361 0.631136345 0.631136353 7.07E-08 CG17163 FBtr0113727|FBtr0309316 23080869|23080757 23081631|23081631 X - 23080920 23081098 3'utr CG17163 FlyBase G69629.1 CTTATATATTTACAAATGTACTTATATATCTTTAAGATAAATAGTGTACACGCCTAGATACACTCCAATTAATTAACTTTGGGTATCGTTCTACGAATTTTGCATACTGGATGTGTATTAAGGTGTATTTGATCTCATTCAATGATATTATTTGTGATGTAACAACTTCAAGGTAATTT 191 23080970 0.991529555 25 180 1950 0.941176471 1.84094208 0.113122172 0.109947644 0.230769231 191 11 2 208 X:23080920-23081098 8 CG17163 FBtr0309316|FBtr0113727 23080757|23080869 23081631|23081631 TGATCTCA 8mer-A1 dme-bantam-3p X - 23080899 23080998 3'utr CG17163 FlyBase G52367.1 TGCATACTGGATGTGTATTAAGGTGTATTTGATCTCATTCAATGATATTATTTGTGATGTAACAACTTCAAGGTAATTTCAATTATTCCCCTAAATGAAA 103 23080970 0.992618809 18 100 1158 0.979452055 2.155336037 0.123287671 0.359223301 0.547945205 103 3 0 143 X:23080899-23080998 8 100.5 4982 FBgn0039942 110.9 8.843333333 13.50666667 0.906221821 11.36449303 7.44076999 1 1 1 0.1 dme-miR-184-5p 6mer3-8 TGATAA X 23086253 23086258 - X_23086253_23086258_- 0.584941325 0.99999987 0.792470598 0.293490751 CG17159 FBtr0113717|FBtr0302542 23085729|23084958 23089410|23089410 X - 23086218 23086272 3'utr CG17159 FlyBase G69633.1 AGGGAAGCTAACAATGATAATCTGGAAATTATGCTTACAAACAACACTCCTATAC 7 23086244 0.969436802 4 6 36 0.857142857 0.77815125 0.285714286 0 0 7 1 0 6 X:23086218-23086272 6 CG17159 FBtr0302542|FBtr0113717 23084958|23085729 23089410|23089410 TGATAA 6mer3-8 dme-miR-184-5p X - 23086230 23086269 3'utr CG17159 FlyBase G52371.1 GAAGCTAACAATGATAATCTGGAAATTATGCTTACAAACA 6 23086258 0.949579637 3 6 26 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 X:23086230-23086269 6 4 4983 FBgn0039945 285.31 7.496666667 11.39666667 0.014019838 0.533570476 0.350979819 -14 0 -7 0.1 dme-bantam-3p 6mer3-8 TGATCT X 23086405 23086410 - X_23086405_23086410_- 0.995358234 0.974489364 0.984923799 0.01475647 CG17159 FBtr0113717|FBtr0302542 23085729|23084958 23089410|23089410 X - 23086309 23086454 3'utr CG17159 FlyBase G69634.1 ACTTTTCATAGCATTTGGTAGTTGTTAATAGAAATGACATTTGTTGATCTTAACTATACCTGTTACTCTTAGATTAAAAGGTTATACCAAAATCGTTGGAACTATGTATTAGTCAAAAGAAAACGTTGTCGAATAGTAAAGTAAAA 29 23086412 0.991444339 15 26 274 0.911764706 1.491361694 0.205882353 0.172413793 0.294117647 29 3 0 31 X:23086309-23086454 6 CG17159 FBtr0302542|FBtr0113717 23084958|23085729 23089410|23089410 TGATCT 6mer3-8 dme-bantam-3p X - 23086380 23086452 3'utr CG17159 FlyBase G52373.1 TTTTCATAGCATTTGGTAGTTGTTAATAGAAATGACATTTGTTGATCTTAACTATACCTGTTACTCTTAGATT 15 23086410 0.739126445 8 14 149 0.935483871 1.462397998 0.258064516 0.666666667 0.838709677 15 2 0 29 X:23086380-23086452 6 16.5 4984 FBgn0039945 285.31 7.496666667 11.39666667 0.057831832 2.200978213 1.447791752 2 0 1 0.1 dme-miR-980-5p 7mer-m8 GAAAAAC X 23107387 23107393 + X_23107387_23107393_+ 0.543965015 0.510549911 0.527257463 0.023628044 ATbp FBtr0301978 23107329 23108331 X + 23107361 23107397 3'utr ATbp FlyBase G63638.1 TTCCCCAATTAACCACATTGCATCTCGAAAAACCCTG 17 23107379 0.824084631 3 17 82 1 1.322219295 0.047619048 0.235294118 0.380952381 17 0 0 21 X:23107361-23107397 7 ATbp FBtr0301978 23107329 23108331 GAAAAAC 7mer-m8 dme-miR-980-5p X + 23107352 23107391 3'utr ATbp FlyBase G47955.1 GCTCAAAGATTCCCCAATTAACCACATTGCATCTCGAAAA 9 23107379 0.965643166 3 8 41 0.818181818 0.954242509 0 0.222222222 0.363636364 9 2 0 9 X:23107352-23107391 5 12.5 4985 FBgn0039946 68.66666667 3.726666667 5.74 0.182038835 3.354203936 2.177700348 8 8 8 0.1 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG X 2343442 2343448 + X_2343442_2343448_+ 0.702941965 0.702941419 0.702941692 4.24E-07 phl FBtr0344007|FBtr0070401 2343430|2343430 2343870|2343870 X + 2343419 2343493 stop_codon phl FlyBase G58350.1 TGGGAATATCTAGACAGCGACCTGTACCTGTACTTACATATATCCTGCGTGATCAACGTGATCCTACATCTATAT 197 2343441 0.908237134 10 190 1127 0.96812749 2.084576278 0.011952191 0.208121827 0.378486056 197 7 1 243 X:2343419-2343493 7 phl FBtr0344007|FBtr0070401 2343430|2343430 2343870|2343870 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" X + 2343425 2343471 stop_codon phl FlyBase G44131.1 TATCTAGACAGCGACCTGTACCTGTACTTACATATATCCTGCGTGAT 130 2343441 0.905856282 6 126 716 0.961352657 2.298853076 0 0.415384615 0.632850242 130 8 0 199 X:2343425-2343471 7 160 4986 FBgn0003079 445.6666667 16.59666667 25.57666667 0.359012715 9.640490058 6.255701812 1 1 1 0.1 dme-miR-14-3p 6mer3-8 AAGACT X 2444528 2444533 - X_2444528_2444533_- 0.999999776 0.999999722 0.999999749 7.07E-08 boi FBtr0070457|FBtr0334883|FBtr0303887|FBtr0303886|FBtr0070458 2444165|2444165|2444165|2444165|2444165 2445050|2445050|2445050|2445050|2445050 X - 2444477 2444607 3'utr boi FlyBase G64423.1 TGCTGCTTCGTTTTGTTTTAGTTAAATATTGAATTTGAAAATATACAAACTTTAGTATAAGGAATTGGTAATGTAAGACTTTTTTCGTTGCTGCCGGCCAGATAGTCAGTAGAATTACTAATGTTAAGTTT 137 2444536 0.990803267 24 129 1338 0.933333333 2.187520721 0.2 0.145985401 0.290909091 137 11 0 154 X:2444477-2444607 6 boi FBtr0303886|FBtr0070458|FBtr0334883|FBtr0303887|FBtr0070457 2444165|2444165|2444165|2444165|2444165 2445050|2445050|2445050|2445050|2445050 AAGACT 6mer3-8 dme-miR-14-3p X - 2444434 2444577 3'utr boi FlyBase G48554.1 GAATTTGAAAATATACAAACTTTAGTATAAGGAATTGGTAATGTAAGACTTTTTTCGTTGCTGCCGGCCAGATAGTCAGTAGAATTACTAATGTTAAGTTTTTTTTTTTATTATTGATAGAACTATTTCGGGGGCCAAATTTTA 109 2444536 0.790149557 19 98 988 0.917721519 1.860338007 0.208860759 0.348623853 0.550632911 109 12 1 145 X:2444434-2444577 6 93 4987 FBgn0040388 902.53 28.22 43.69666667 0.103043666 3.295535082 2.128308795 3 3 3 0.1 dme-miR-1007-3p 6mer3-8 TGAGCT X 2444683 2444688 - X_2444683_2444688_- 0.999998585 0.999998119 0.999998352 3.54E-07 boi FBtr0070457|FBtr0334883|FBtr0303887|FBtr0303886|FBtr0070458 2444165|2444165|2444165|2444165|2444165 2445050|2445050|2445050|2445050|2445050 X - 2444661 2444707 3'utr boi FlyBase G64424.1 TCAAGTTTTGTTTTCATTTTGAGCTCATTAAAATGTATTTCGAGCAG 99 2444689 0.790743353 6 99 1251 1 2.041392685 0.154545455 0.090909091 0.181818182 99 0 0 110 X:2444661-2444707 6 boi FBtr0303886|FBtr0070458|FBtr0334883|FBtr0303887|FBtr0070457 2444165|2444165|2444165|2444165|2444165 2445050|2445050|2445050|2445050|2445050 TGAGCT 6mer3-8 dme-miR-1007-3p X - 2444667 2444705 3'utr boi FlyBase G48555.1 AAGTTTTGTTTTCATTTTGAGCTCATTAAAATGTATTTC 49 2444689 0.792873835 4 47 599 0.966666667 1.763427994 0.25 0.183673469 0.333333333 49 2 0 58 X:2444667-2444705 6 74 4988 FBgn0040388 902.53 28.22 43.69666667 0.081991734 2.622253721 1.69349302 1 1 1 0.1 dme-miR-79-3p 8mer-A1 TAGCTTTA X 2444846 2444853 - X_2444846_2444853_- 0.625363192 0.625362003 0.625362597 8.49E-07 boi FBtr0070457|FBtr0334883|FBtr0303887|FBtr0303886|FBtr0070458 2444165|2444165|2444165|2444165|2444165 2445050|2445050|2445050|2445050|2445050 X - 2444808 2444875 3'utr boi FlyBase G64425.2 GCAGCTCGAAACCCTCGAATATTAGCTTTAAGGCACCCGGTACTGTTTAGTTTTCCAAAAAACCAATT 132 2444854 0.699320215 12 123 872 0.952702703 2.149219113 0.114864865 0.098484848 0.195945946 132 7 0 141 X:2444808-2444875 8 boi FBtr0303886|FBtr0070458|FBtr0334883|FBtr0303887|FBtr0070457 2444165|2444165|2444165|2444165|2444165 2445050|2445050|2445050|2445050|2445050 TAGCTTTA 8mer-A1 dme-miR-79-3p X - 2444737 2445082 stop_codon boi FlyBase G48556.1 CGTCGGGCAGTCTGAACAGTATTGAGGTGTGATGGCTCGCAGAGGAGGCAACTAACTAGTGGACTAGTGGGCGGAGCAGCACAACGAGGAGAAATATACCTAAGCGGCAAGCGAAAGTGGTTCCCCAAAAACAGACAGTTTCAAGTAGACTTAAGGATCCGAAACTAGATGTGTATTATTGAGATAATCGTAGGACAGGTCGGCAGAGCAGCTCGAAACCCTCGAATATTAGCTTTAAGGCACCCGGTACTGTTTAGTTTTCCAAAAAACCAATTAATTTGGCCAATCATTAAGCTTAGAACTAGGGAATTTGCCATTAACAGAAGTTTCTGTCGTTTCAAATGCT 176 2444854 0.971450702 42 168 956 0.966292135 2.411619706 0.183520599 0.380681818 0.5917603 176 9 0 258 X:2444737-2445082 8 80.5 4989 FBgn0040388 902.53 28.22 43.69666667 0.089193711 2.852586818 1.842245785 1 1 1 0.1 dme-miR-34-5p 7mer-A1 ACTGCCA X 253453 253459 + X_253453_253459_+ 0.713197049 0.611957523 0.662577286 0.071587137 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 X + 253422 253480 3'utr G9a FlyBase G57695.1 TCGAAGCCCGGTCGGCTTTCTTTCTTTTTTGACTGCCAAATGTTTCGTGGTTAACCACT 25 253450 0.936675989 8 23 248 0.935483871 1.462397998 0.193548387 0.24 0.387096774 25 2 0 29 X:253422-253480 7 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 ACTGCCA 7mer-A1 dme-miR-34-5p X + 253425 253472 3'utr G9a FlyBase G43659.1 AAGCCCGGTCGGCTTTCTTTCTTTTTTGACTGCCAAATGTTTCGTGGT 14 253450 0.70470411 5 14 157 1 1.146128036 0.428571429 0 0 14 0 0 14 X:253425-253472 7 17.5 4990 FBgn0040372 792.6533333 13.78666667 21.11333333 0.022077747 1.26934236 0.82886012 3 3 3 0.1 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG X 253581 253587 + X_253581_253587_+ 0.679625457 0.631491267 0.655558362 0.034036019 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 X + 253537 253598 3'utr G9a FlyBase G57696.1 TTGTATTAATGTTTTACGCCTTATTAATAATGTTTTTATTCTTAGTACCTGTAAAAACAAAT 9 253588 0.982593782 5 9 72 1 1 0 0.111111111 0.2 9 0 0 10 X:253537-253598 7 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" X + 253565 253609 3'utr G9a FlyBase G43660.1 AATGTTTTTATTCTTAGTACCTGTAAAAACAAATTAGTTTATACT 6 253587 0.985584871 4 5 49 0.714285714 0.698970004 0 0.166666667 0.285714286 6 2 0 5 X:253565-253609 7 6.5 4991 FBgn0040372 792.6533333 13.78666667 21.11333333 0.008200306 0.471470019 0.30786233 -7 -6 -6.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 253766 253773 + X_253766_253773_+ 0.63113646 0.631136648 0.631136554 7.07E-08 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 X + 253730 253787 3'utr G9a FlyBase G57698.1 CAGGCATAAAATAGAATTGTAATGGAGGAAAGACCATCTAGTCATAAGAATGAAGGAG 50 253766 0.936809497 6 48 185 0.967741935 1.477121255 0.338709677 0.22 0.370967742 50 1 1 60 X:253730-253787 8 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X + 253742 253793 3'utr G9a FlyBase G43662.1 AGAATTGTAATGGAGGAAAGACCATCTAGTCATAAGAATGAAGGAGACAAAG 25 253766 0.913735943 5 25 98 1 1.62324929 0.428571429 0.52 0.714285714 25 0 0 42 X:253742-253793 8 37 4992 FBgn0040372 792.6533333 13.78666667 21.11333333 0.046678666 2.683752418 1.752447111 0 0 0 0.1 dme-miR-190-5p 6mer3-8 ACATAT X 253877 253882 + X_253877_253882_+ 0.999420164 0.999999303 0.999709734 0.000409486 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 X + 253858 253968 3'utr G9a FlyBase G57699.1 TGTATGAGCTCTGGAGCATACATATGTAAATACGTGATACGAAAAAGTAATACGTTTGATTTTACCGTTAACCATGAAAATTAGACCGTTTAAATTGACCTGTAATGGGCA 11 253881 0.987485934 9 9 70 0.923076923 1.079181246 0.230769231 0.181818182 0.307692308 11 1 0 12 X:253858-253968 6 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 ACATAT 6mer3-8 dme-miR-190-5p X + 253870 253899 3'utr G9a FlyBase G43663.1 GGAGCATACATATGTAAATACGTGATACGA 5 253881 0.631984841 3 3 19 0.8 0.602059991 0 0.25 0.4 4 1 0 4 X:253870-253899 6 4 4993 FBgn0040372 792.6533333 13.78666667 21.11333333 0.005046342 0.290135397 0.189453742 -4 -4 -4 0.1 dme-miR-304-5p 8mer-A1 TGAGATTA X 2583759 2583766 - X_2583759_2583766_- 0.625363359 0.625363041 0.6253632 2.83E-07 CG13760 FBtr0308567|FBtr0300707 2583743|2583743 2584291|2584291 X - 2583741 2583776 3'utr CG13760 FlyBase G64452.1 AGAAAATAAATGAGATTATTGTTCCAAATGTGAGCC 6 2583766 0.969312862 2 6 36 1 0.903089987 0.25 0.166666667 0.375 6 0 0 8 X:2583741-2583776 8 CG13760 FBtr0300707|FBtr0308567 2583743|2583743 2584291|2584291 TGAGATTA 8mer-A1 dme-miR-304-5p X - 2583751 2583786 3'utr CG13760 FlyBase G48573.1 ATGTATATGTAGAAAATAAATGAGATTATTGTTCCA 8 2583766 0.892965065 2 8 67 1 1.113943352 0.076923077 0.375 0.615384615 8 0 0 13 X:2583751-2583786 8 7 4994 FBgn0040375 102.9966667 8.843333333 13.49 0.067963365 0.791556728 0.518902891 0 0 0 0.1 dme-bantam-3p 6mer3-8 TGATCT X 2588033 2588038 + X_2588033_2588038_+ 0.99999647 0.999995588 0.999996029 6.36E-07 wds FBtr0308566 2587628 2588217 X + 2587936 2588067 3'utr wds FlyBase G58370.1 ATTAGCCTATTGTATTGGCCCACCATGCAAGCGAGAATATTCCCCCAAAATTGTTTGTAACCTTTGACACAGCCACGCAAACCAACATAACTTATAATGATCTTTCGGTGACGAGAAAACTAAATTTAAGCG 184 2588033 0.986420856 14 179 1531 0.976525822 2.318063335 0.34741784 0.114130435 0.234741784 184 5 0 208 X:2587936-2588067 6 wds FBtr0308566 2587628 2588217 TGATCT 6mer3-8 dme-bantam-3p X + 2588015 2588066 3'utr wds FlyBase G44142.1 AACCAACATAACTTATAATGATCTTTCGGTGACGAGAAAACTAAATTTAAGC 91 2588033 0.768524075 7 87 756 0.95862069 1.841984805 0.427586207 0.417582418 0.634482759 91 5 1 139 X:2588015-2588066 6 133 4995 FBgn0040066 310 19.74666667 30.31666667 0.429032258 6.735313977 4.387025838 0 0 0 0.1 dme-miR-14-3p 6mer3-8 AAGACT X 2606789 2606794 + X_2606789_2606794_+ 0.999999692 0.995574599 0.997787146 0.003129018 Zw10 FBtr0070441 2606528 2606824 X + 2606763 2606811 3'utr Zw10 FlyBase G58405.1 CCGCAACGCAACACAATATTTAACTTAAGACTTATTTAAATGAATAAAA 14 2606797 0.988322601 6 14 130 1 1.204119983 0.0625 0.142857143 0.25 14 0 0 16 X:2606763-2606811 6 Zw10 FBtr0070441 2606528 2606824 AAGACT 6mer3-8 dme-miR-14-3p X + 2606777 2606812 3'utr Zw10 FlyBase G44173.1 AATATTTAACTTAAGACTTATTTAAATGAATAAAAA 8 2606798 0.702054497 3 7 71 0.909090909 1 0 0.25 0.454545455 8 1 0 10 X:2606777-2606812 6 10.5 4996 FBgn0004643 521.4966667 24.47 37.23 0.020134357 0.429096853 0.28203062 -8 -9 -8.5 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA X 2617896 2617903 - X_2617896_2617903_- 0.625171889 0.624942371 0.62505713 0.000162281 Tsp3A FBtr0307159 2617756 2618435 X - 2617882 2617920 3'utr Tsp3A FlyBase G64495.1 TACTCGCTGAAATTCGATGCATTTATTTATATGTAATTC 20 2617904 0.788522122 6 17 203 0.869565217 1.301029996 0.47826087 0.15 0.260869565 20 3 0 20 X:2617882-2617920 8 Tsp3A FBtr0307159 2617756 2618435 TGCATTTA 8mer-A1 dme-miR-277-3p X - 2617822 2617920 3'utr Tsp3A FlyBase G48605.1 TACTCGCTGAAATTCGATGCATTTATTTATATGTAATTCCTTCGAAAAAAAAGCAACAAACAGTGCGCACAAATCTTGAATATCTATTCATCCAGAACC 30 2617904 0.978834267 11 24 220 0.80952381 0.929418926 0.285714286 0.333333333 0.523809524 30 5 3 34 X:2617822-2617920 8 17 4997 FBgn0040334 330.6633333 22.46333333 34.46666667 0.051411809 0.756788841 0.493230174 1 1 1 0.1 dme-miR-34-5p 6mer2-7 ACTGCC X 2618037 2618042 - X_2618037_2618042_- 0.999988908 0.99996875 0.999978829 1.42E-05 Tsp3A FBtr0307159 2617756 2618435 X - 2618021 2618104 3'utr Tsp3A FlyBase G64497.1 TACTTGCATGTTTTGTGCGAGGTGTGTGTATTTTCAATTCCATATTACTTATGTTGTAATCGACTGCCTGGATAGCTGTATATA 26 2618036 0.817471291 10 25 216 0.96875 1.491361694 0.25 0.192307692 0.34375 26 1 0 31 X:2618021-2618104 6 Tsp3A FBtr0307159 2617756 2618435 ACTGCC 6mer2-7 dme-miR-34-5p X - 2618015 2618054 3'utr Tsp3A FlyBase G48607.1 ATGTTGTAATCGACTGCCTGGATAGCTGTATATACTCGTA 14 2618050 0.785712331 6 14 99 1 1.230448921 0.235294118 0.142857143 0.294117647 14 0 0 17 X:2618015-2618054 6 17 4998 FBgn0040334 330.6633333 22.46333333 34.46666667 0.051411809 0.756788841 0.493230174 -6 8 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 2621819 2621825 + X_2621819_2621825_+ 0.822231983 0.822220607 0.822226295 8.06E-06 Seipin FBtr0070442 2621718 2622140 X + 2621754 2621887 3'utr Seipin FlyBase G58413.1 ATGGAACGAAAGAGGGACCACCATTAACCACCGAAGGCTAGACCAACGCCCGTGCGACGCTTGAGCCAAAGACTAAATAGATTTAGGACTAAGTTAGTGAACACAGCCAGCTGAAGTATTCCGGCGGATTAGCT 89 2621815 0.962228355 14 82 416 0.91 1.481920138 0.14 0.101123596 0.2 89 7 2 91 X:2621754-2621887 7 Seipin FBtr0070442 2621718 2622140 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X + 2621760 2621854 3'utr Seipin FlyBase G44177.1 CGAAAGAGGGACCACCATTAACCACCGAAGGCTAGACCAACGCCCGTGCGACGCTTGAGCCAAAGACTAAATAGATTTAGGACTAAGTTAGTGAA 61 2621815 0.958105488 10 56 267 0.928571429 1.658011397 0.102040816 0.426229508 0.642857143 61 6 1 91 X:2621760-2621854 7 61 4999 FBgn0040336 110.8766667 6.436666667 9.653333333 0.550160839 9.476954946 6.319060773 4 4 4 0.1 dme-miR-305-5p 6mer2-7 GTACAA X 2633606 2633611 + X_2633606_2633611_+ 0.999971209 0.999990137 0.999980673 1.34E-05 PI4KIIIalpha FBtr0331587 2633296 2633672 X + 2633561 2633647 3'utr PI4KIIIalpha FlyBase G58443.1 ATTTATAAATATTAAATCAATTATAGGGCAATATGTTATATAATGGTACAACAAGAAATGTATTATTAGAGGGAAGTGGATGTCGTT 16 2633604 0.983540521 5 14 113 0.913043478 1.021189299 0.217391304 0.3125 0.52173913 16 1 1 21 X:2633561-2633647 6 PI4KIIIalpha FBtr0331587 2633296 2633672 GTACAA 6mer2-7 dme-miR-305-5p X + 2633559 2633656 3'utr PI4KIIIalpha FlyBase G44204.1 ATATTTATAAATATTAAATCAATTATAGGGCAATATGTTATATAATGGTACAACAAGAAATGTATTATTAGAGGGAAGTGGATGTCGTTTTTGGTGGT 13 2633603 0.983686763 7 13 104 1 1.230448921 0.470588235 0.307692308 0.470588235 13 0 0 17 X:2633559-2633656 6 8.5 5000 FBgn0267350 1055.98 18.11666667 27.74666667 0.008049395 0.469181233 0.306343104 2 3 2.5 0.1 dme-miR-7-5p 6mer3-8 GTCTTC X 2695020 2695025 - X_2695020_2695025_- 0.962087014 0.999999703 0.981043358 0.026808327 CG2658 FBtr0070502|FBtr0345716 2694721|2694390 2695063|2695063 X - 2694950 2695039 3'utr CG2658 FlyBase G64508.1 AAGTCATAGCCATAGTCTTCGTACGCCACGTGCCCCTAGTCGCTCACCTTTTCGCCCGCCCCTGGCTCATGTGCGTTGAATGTAAATAAA 12 2695032 0.969947572 9 11 62 0.933333333 1.146128036 0.133333333 0.166666667 0.333333333 12 1 0 14 X:2694950-2695039 6 CG2658 FBtr0070502|FBtr0345716 2694721|2694390 2695063|2695063 GTCTTC 6mer3-8 dme-miR-7-5p X - 2694946 2695049 3'utr CG2658 FlyBase G48614.1 CTCAGATCGCAAGTCATAGCCATAGTCTTCGTACGCCACGTGCCCCTAGTCGCTCACCTTTTCGCCCGCCCCTGGCTCATGTGCGTTGAATGTAAATAAAGTTG 15 2695033 0.973421513 8 15 90 1 1.342422681 0.090909091 0.266666667 0.5 15 0 0 22 X:2694946-2695049 6 6 5001 FBgn0024992 506.2333333 20.17 30.76333333 0.011852242 0.297471492 0.195037382 7 8 7.5 0.1 dme-miR-308-3p 7mer-m1 TGTGATT X 269695 269701 - X_269695_269701_- 0.505269401 0.503668167 0.504468784 0.001132219 ewg FBtr0332978|FBtr0332976|FBtr0332977|FBtr0308209|FBtr0089441|FBtr0308208 269590|269590|269590|269609|269609|269609 273303|270568|270568|270568|270568|270568 X - 269658 269728 3'utr ewg FlyBase G63738.1 AAATTTTATTTAAAAAAAAGCGATTGTTGTGATTTTAATATAATTTTACCTTAAAATATTTGCTTGTACAT 89 269704 0.98749666 8 88 922 0.990291262 2.008600172 0.097087379 0.146067416 0.262135922 89 1 0 102 X:269658-269728 7 ewg FBtr0089441|FBtr0308208|FBtr0332977|FBtr0308209|FBtr0332976|FBtr0332978 269609|269609|269590|269609|269590|269590 270568|270568|270568|270568|270568|273303 TGTGATT 7mer-m1 dme-miR-308-3p X - 269676 269728 3'utr ewg FlyBase G48050.1 AAATTTTATTTAAAAAAAAGCGATTGTTGTGATTTTAATATAATTTTACCTTA 55 269704 0.81827912 7 53 576 0.973684211 1.86923172 0.065789474 0.254545455 0.460526316 55 2 0 74 X:269676-269728 7 71.5 5002 FBgn0005427 485.9333333 14.70333333 22.51 0.147139525 4.862842893 3.17636606 3 3 3 0.1 dme-miR-2535b-3p 8mer-m1 CCGTGAGT X 270080 270087 - X_270080_270087_- 0.317106597 0.437147489 0.377127043 0.084881734 ewg FBtr0332978|FBtr0332976|FBtr0332977|FBtr0308209|FBtr0089441|FBtr0308208 269590|269590|269590|269609|269609|269609 273303|270568|270568|270568|270568|270568 X - 270066 270121 3'utr ewg FlyBase G63739.1 ATCAGCCAGCCTACAGTTAGACGTACCTGTAACCCCGTGAGTTCTCGCTCCATACC 32 270092 0.784666311 7 31 159 0.976744186 1.62324929 0.093023256 0.3125 0.488372093 32 1 0 42 X:270066-270121 8 ewg FBtr0089441|FBtr0308208|FBtr0332977|FBtr0308209|FBtr0332976|FBtr0332978 269609|269609|269590|269609|269590|269590 270568|270568|270568|270568|270568|273303 CCGTGAGT 8mer-m1 dme-miR-2535b-3p X - 270067 270119 3'utr ewg FlyBase G48051.1 CAGCCAGCCTACAGTTAGACGTACCTGTAACCCCGTGAGTTCTCGCTCCATAC 24 270092 0.719497235 5 20 128 0.853658537 1.243038049 0.048780488 0.416666667 0.658536585 24 5 1 35 X:270067-270119 8 20.5 5003 FBgn0005427 485.9333333 14.70333333 22.51 0.042186857 1.394241669 0.910706353 5 5 5 0.1 dme-miR-1006-3p 7mer-A1 GAATTTA X 270379 270385 - X_270379_270385_- 0.539324493 0.624252451 0.581788472 0.060053165 ewg FBtr0332978|FBtr0332976|FBtr0332977|FBtr0308209|FBtr0089441|FBtr0308208 269590|269590|269590|269609|269609|269609 273303|270568|270568|270568|270568|270568 X - 270351 270492 3'utr ewg FlyBase G63743.1 TGAAAAAATGCACTTGCCATTTAAACTTAGACGCGCACATTGTGAATGCCAAAAAATCTAAATAGTTATAGCCAAAGGAAATCCCTCAGTTACTAACTATACAAATTGAATTTAGTGCCGGGAATAGAAAACCAAAAATTTT 249 270377 0.962463436 17 243 1343 0.976744186 1.866287339 0.139534884 0.172690763 0.315614618 249 4 3 294 X:270351-270492 7 ewg FBtr0089441|FBtr0308208|FBtr0332977|FBtr0308209|FBtr0332976|FBtr0332978 269609|269609|269590|269609|269590|269590 270568|270568|270568|270568|270568|273303 GAATTTA 7mer-A1 dme-miR-1006-3p X - 270350 270400 3'utr ewg FlyBase G48054.1 CTAACTATACAAATTGAATTTAGTGCCGGGAATAGAAAACCAAAAATTTTT 116 270377 0.861121674 8 113 609 0.982035928 1.737722593 0.191616766 0.318965517 0.526946108 116 1 2 164 X:270350-270400 7 146 5004 FBgn0005427 485.9333333 14.70333333 22.51 0.300452737 9.929721152 6.486006219 -8 -8 -8 0.1 dme-bantam-3p 8mer-A1 TGATCTCA X 270995 271002 - X_270995_271002_- 0.631135759 0.631127561 0.63113166 5.80E-06 ewg FBtr0332978 269590 273303 X - 270977 271032 3'utr ewg FlyBase G63747.1 TGGGAAATGGCGGCGTTCAGTGCTATTCGCTGATCTCAGCGGGATCGTCAGTCCTA 57 271002 0.781620344 6 52 383 0.955223881 1.329058719 0.253731343 0.175438596 0.298507463 57 1 2 64 X:270977-271032 8 ewg FBtr0332978 269590 273303 TGATCTCA 8mer-A1 dme-bantam-3p X - 270969 271041 3'utr ewg FlyBase G48057.1 CATCCTCTTTGGGAAATGGCGGCGTTCAGTGCTATTCGCTGATCTCAGCGGGATCGTCAGTCCTAAGCCGGCG 35 271002 0.814625189 5 31 219 0.898305085 1.72427587 0.220338983 0.558823529 0.745762712 34 6 0 53 X:270969-271041 8 41.5 5005 FBgn0005427 485.9333333 14.70333333 22.51 0.085402662 2.822489231 1.843625056 0 0 0 0.1 dme-bantam-3p 8mer-A1 TGATCTCA X 271178 271185 - X_271178_271185_- 0.630959703 0.630524873 0.630742288 0.00030745 ewg FBtr0332978|FBtr0100578|FBtr0100582 269590|268507|268507 273303|271561|271561 X - 271121 271211 intron-5'utr ewg FlyBase G63748.1 AGGATATCCCGTTTCGGTGAGCAATGTGATCTCAGTTCCCGTCTCTATGTACCAGTCGGTAATGGCCAACGTGCAGCAGATCCAGACGAAC 63 271185 0.987010927 12 61 528 0.958333333 1.838849091 0.166666667 0.142857143 0.25 63 3 0 69 X:271121-271211 8 ewg FBtr0100582|FBtr0332978|FBtr0100578 268507|269590|268507 271561|273303|271561 TGATCTCA 8mer-A1 dme-bantam-3p X - 271136 271211 intron-5'utr ewg FlyBase G48058.1 AGGATATCCCGTTTCGGTGAGCAATGTGATCTCAGTTCCCGTCTCTATGTACCAGTCGGTAATGGCCAACGTGCAG 53 271186 0.983633203 9 50 422 0.942857143 1.342422681 0.228571429 0.264150943 0.442857143 53 2 2 66 X:271136-271211 8 55 5006 FBgn0005427 485.9333333 14.70333333 22.51 0.11318425 3.740648379 2.443358507 0 1 0.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 2717227 2717232 + X_2717227_2717232_+ 0.665918644 0.691186849 0.678552746 0.017867316 CG2694 FBtr0070481|FBtr0070481|FBtr0070481|FBtr0070482|FBtr0070482|FBtr0070482|FBtr0310649|FBtr0310649|FBtr0310649 2717107|2717107|2717107|2717107|2717107|2717107|2717107|2717107|2717107 2717654|2717654|2717654|2717654|2717654|2717654|2717654|2717654|2717654 X + 2717194 2717288 3'utr CG2694 FlyBase G58487.1 AAAATGGAGCAGCCTCCAGTGAAAACGAACACGCTGTGACCTACTTTATATACCTACCTACATTTTATACAAACTTCTATAACCTGTACAATGGC 98 2717228 0.869808934 13 96 530 0.983870968 1.785329835 0 0.183673469 0.35483871 98 1 1 122 X:2717194-2717288 6 CG2694 FBtr0070482|FBtr0070482|FBtr0070482|FBtr0310649|FBtr0310649|FBtr0310649|FBtr0070481|FBtr0070481|FBtr0070481 2717107|2717107|2717107|2717107|2717107|2717107|2717107|2717107|2717107 2717654|2717654|2717654|2717654|2717654|2717654|2717654|2717654|2717654 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X + 2717194 2717250 3'utr CG2694 FlyBase G44236.1 AAAATGGAGCAGCCTCCAGTGAAAACGAACACGCTGTGACCTACTTTATATACCTAC 65 2717228 0.878982731 8 61 325 0.965909091 1.62838893 0.022727273 0.261538462 0.454545455 65 2 1 85 X:2717194-2717250 6 76 5007 FBgn0024991 290.3333333 11.33666667 17.40333333 0.261768083 6.703910615 4.366979506 -1 -1 -1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 2734792 2734797 - X_2734792_2734797_- 0.668320799 0.509654453 0.588987626 0.112194017 crm FBtr0070495|FBtr0070495|FBtr0070495|FBtr0070496|FBtr0070496|FBtr0070496 2734246|2734246|2734246|2734246|2734246|2734246 2735002|2735002|2735002|2735002|2735002|2735002 X - 2734715 2734817 3'utr crm FlyBase G64551.1 TATGTTTTTACGCGACTTTTTGTGATCTATACTCATTTTATGTATGCCAAGTATTAGCAAGCACTCACATTGTCTGAACATATATATTTATTTATACATTAAC 239 2734796 0.777182562 16 230 1811 0.967105263 1.62324929 0.381578947 0.217573222 0.384868421 239 4 6 294 X:2734715-2734817 6 crm FBtr0070495|FBtr0070495|FBtr0070495|FBtr0070496|FBtr0070496|FBtr0070496 2734246|2734246|2734246|2734246|2734246|2734246 2735002|2735002|2735002|2735002|2735002|2735002 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 2734779 2734816 3'utr crm FlyBase G48645.1 ATGTTTTTACGCGACTTTTTGTGATCTATACTCATTTT 108 2734796 0.648362768 10 108 942 1 2.176091259 0.806666667 0.314814815 0.506666667 108 0 0 150 X:2734779-2734816 6 115 5008 FBgn0000376 219.6566667 6.966666667 10.63 0.523544319 16.50717703 10.81843838 -1 -1 -1 0.1 dme-miR-283-5p 8mer-A1 TGATATTA X 2734865 2734872 - X_2734865_2734872_- 0.592192281 0.59218958 0.59219093 1.91E-06 crm FBtr0070495|FBtr0070496 2734246|2734246 2735002|2735002 X - 2734840 2734898 3'utr crm FlyBase G64552.1 GTGTGCCTCCAAGCCTCATGTCCCACTGATATTACTCATTACTCACTCATCCCACCCAC 11 2734873 0.971848226 7 11 64 1 1.041392685 0.363636364 0 0 11 0 0 11 X:2734840-2734898 8 crm FBtr0070495|FBtr0070496 2734246|2734246 2735002|2735002 TGATATTA 8mer-A1 dme-miR-283-5p X - 2734838 2734873 3'utr crm FlyBase G48646.1 CTGATATTACTCATTACTCACTCATCCCACCCACCC 5 2734872 0.971902486 4 4 17 1 0.698970004 0.4 0 0 5 0 0 5 X:2734838-2734873 8 7 5009 FBgn0000376 219.6566667 6.966666667 10.63 0.031867915 1.004784689 0.658513641 1 0 0.5 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA X 2949079 2949086 + X_2949079_2949086_+ 0.625362345 0.625363634 0.625362989 9.19E-07 CG3603 FBtr0332493 2948923 2949120 X + 2949060 2949098 3'utr CG3603 FlyBase G58505.1 AAGAGTAGGACCAGATTATTGCATTTACTTGTCAAGCCA 25 2949078 0.747567587 3 25 220 1 1.447158031 0.535714286 0.12 0.214285714 25 0 0 28 X:2949060-2949098 8 CG3603 FBtr0332493 2948923 2949120 TGCATTTA 8mer-A1 dme-miR-277-3p X + 2949060 2949092 3'utr CG3603 FlyBase G44249.1 AAGAGTAGGACCAGATTATTGCATTTACTTGTC 17 2949078 0.718231916 4 16 149 0.913043478 1.322219295 0.217391304 0.352941176 0.52173913 17 2 0 21 X:2949060-2949092 8 21 5010 FBgn0029648 25 3.55 5.413333333 0.84 5.915492958 3.879310345 1 1 1 0.1 dme-miR-308-3p 7mer-m1 TGTGATT X 3132826 3132832 + X_3132826_3132832_+ 0.521223855 0.521223855 0.521223855 0 kirre FBtr0309501 3132424 3134532 X + 3132812 3132855 3'utr kirre FlyBase G58507.1 AACAAAAACCGTATTGTGATTTATAGCGTTAATTATTTTATGGC 25 3132825 0.743187544 4 23 264 0.928571429 1.414973348 0 0.12 0.214285714 25 2 0 26 X:3132812-3132855 7 kirre FBtr0309501 3132424 3134532 TGTGATT 7mer-m1 dme-miR-308-3p X + 3132815 3132847 3'utr kirre FlyBase G44251.1 AAAAACCGTATTGTGATTTATAGCGTTAATTAT 17 3132832 0.611854312 4 16 162 1 1.342422681 0.136363636 0.294117647 0.454545455 17 0 0 22 X:3132815-3132847 7 20.5 5011 FBgn0028369 20.34666667 0.466666667 0.723333333 1.007536042 43.92857143 28.34101382 1 -6 -2.5 0.1 dme-miR-988-3p 8mer-m1 ACAAGGGG X 3385571 3385578 + X_3385571_3385578_+ 0.628234967 0.628224317 0.628229642 7.57E-06 dm FBtr0331605|FBtr0070525 3385311|3385311 3391697|3386011 X + 3385555 3385841 5'utr dm FlyBase G58551.1 TACCATACCATACCATACAAGGGGTTAGAGTTTACGAGTGATTTAACAAATTTGATTTCTTCAATGTGATATATATATGATTTTCTTTCCGCGCGATTTGATTTGGTAGGGAAAGGTTAACGAAAGCGGTTTTATGAAATCAATTTGAAGTGTTTTTTTTTCGCTGCATATATTACAATATACACGTATGGATTAGATTTAATTAACAATTAGCGGTCTGTATATAACATATGAAGTAGAATATCTTAATTATTTTTTTGAATTAGTTACTTAACCATGAAGTAAAC 664 3385570 0.977674322 62 611 4768 0.914540816 1.679427897 0.275510204 0.155120482 0.284438776 664 53 14 717 X:3385555-3385841 8 dm FBtr0331605|FBtr0070525 3385311|3385311 3391697|3386011 ACAAGGGG 8mer-m1 dme-miR-988-3p X + 3385555 3385714 5'utr dm FlyBase G44286.1 TACCATACCATACCATACAAGGGGTTAGAGTTTACGAGTGATTTAACAAATTTGATTTCTTCAATGTGATATATATATGATTTTCTTTCCGCGCGATTTGATTTGGTAGGGAAAGGTTAACGAAAGCGGTTTTATGAAATCAATTTGAAGTGTTTTTTTT 297 3385570 0.91509451 39 263 2207 0.891304348 1.567026366 0.20531401 0.32996633 0.519323671 297 36 9 369 X:3385555-3385714 8 282 5012 FBgn0262656 5210.653333 68.99333333 106.66 0.054119893 4.087351435 2.643915245 1 1 1 0.1 dme-miR-304-5p 6mer3-8 TGAGAT X 3386098 3386103 + X_3386098_3386103_+ 0.901585738 0.912647267 0.907116503 0.007821732 dm FBtr0331605 3385311 3391697 X + 3386051 3386137 3'utr dm FlyBase G58555.1 GAGCCACAAAGAGGAGATAGAGCACACAAAGTTGGGAGCGAGAACGATGAGATATATACTTATATAACATCTATATATCTATATATC 67 3386098 0.976643017 8 65 326 0.974683544 1.58546073 0.113924051 0.179104478 0.303797468 67 1 1 77 X:3386051-3386137 6 dm FBtr0331605 3385311 3391697 TGAGAT 6mer3-8 dme-miR-304-5p X + 3386042 3386119 3'utr dm FlyBase G44289.1 ACAACGAAGGAGCCACAAAGAGGAGATAGAGCACACAAAGTTGGGAGCGAGAACGATGAGATATATACTTATATAACA 53 3386098 0.959554018 9 50 226 0.96969697 1.806179974 0.090909091 0.20754717 0.363636364 53 2 0 64 X:3386042-3386119 6 50 5013 FBgn0262656 5210.653333 68.99333333 106.66 0.009595726 0.724707701 0.468779299 0 0 0 0.1 dme-miR-1008-3p 6mer3-8 AGCTGT X 3387014 3387019 + X_3387014_3387019_+ 0.797205282 0.81096671 0.804085996 0.009730779 dm FBtr0331605 3385311 3391697 X + 3386759 3387188 3'utr dm FlyBase G58557.2 ATATATTTTTTAACTGATAACTATGCATATGAAATGCGCAAAACTTAACGAAAACAAAACGGAATTAAGGAAACATTAAACTATATAATAGTGCTAAGCCGCGCCTAACCTCTCGAGATATATATAGTTAGGATGAGAGATAGGAAGAGTGTAGAAATTGGCTGCAAAGTTTGTGATTGGAGTTAAGAGAGGAGAGACCCAGAGAGAGATATATACACCCACGACCCAAGACCCAAGAAAACTCAAACTTTTGTGAGCTGTTTAACTGTCGATTTTTTGCTAATAAGTTATAGCCTTCCGGCGATATGTTATATATATATATATGTTATAACGATTCTACCAATTGTTTACACGCATCTAAGTATCAACTAAACTAAAAACTACTACTAAACTAATGGACATGAAGCATAAGGCAAATGCAAATGAAGTT 1579 3387033 0.918198984 82 1389 15981 0.884320175 1.67615545 0.270833333 0.132995567 0.249451754 1579 178 33 1613 X:3386759-3387188 6 dm FBtr0331605 3385311 3391697 AGCTGT 6mer3-8 dme-miR-1008-3p X + 3386817 3387087 3'utr dm FlyBase G44294.2 ACGGAATTAAGGAAACATTAAACTATATAATAGTGCTAAGCCGCGCCTAACCTCTCGAGATATATATAGTTAGGATGAGAGATAGGAAGAGTGTAGAAATTGGCTGCAAAGTTTGTGATTGGAGTTAAGAGAGGAGAGACCCAGAGAGAGATATATACACCCACGACCCAAGACCCAAGAAAACTCAAACTTTTGTGAGCTGTTTAACTGTCGATTTTTTGCTAATAAGTTATAGCCTTCCGGCGATATGTTATATATATATATATGTTAT 1147 3387033 0.992090859 53 1040 11654 0.912543153 1.768939419 0.284810127 0.380122058 0.590909091 1147 126 26 1586 X:3386817-3387087 6 822.5 5014 FBgn0262656 5210.653333 68.99333333 106.66 0.157849687 11.92144169 7.711419464 -19 -19 -19 0.1 dme-miR-1003-3p 7mer-m8 ATGTGAG X 3387449 3387455 + X_3387449_3387455_+ 0.670369504 0.391456666 0.530913085 0.197221132 dm FBtr0331605 3385311 3391697 X + 3387435 3387508 3'utr dm FlyBase G58559.2 GAAAATTTTTTTCTATGTGAGTTCTAGGCTAATGCTGCCTACTAAACCTATACCCAGATATACATATAATTCTT 34 3387456 0.837033768 9 30 262 0.857142857 1.62324929 0.224489796 0.352941176 0.551020408 34 7 0 42 X:3387435-3387508 7 dm FBtr0331605 3385311 3391697 ATGTGAG 7mer-m8 dme-miR-1003-3p X + 3387390 3387505 3'utr dm FlyBase G44297.1 TAAAGCAAGAAAATTTCTATAGTGTAGGGCGCGAGACGTTTCAACGAAAATTTTTTTCTATGTGAGTTCTAGGCTAATGCTGCCTACTAAACCTATACCCAGATATACATATAATT 22 3387458 0.980335919 12 21 166 0.962962963 1.414973348 0.222222222 0.227272727 0.37037037 22 1 0 26 X:3387390-3387505 7 15.5 5015 FBgn0262656 5210.653333 68.99333333 106.66 0.002974675 0.224659387 0.145321583 -7 -9 -8 0.1 dme-miR-968-5p 6mer3-8 ACTACT X 3388418 3388423 + X_3388418_3388423_+ 0.999973287 0.999999999 0.999986643 1.89E-05 dm FBtr0331605 3385311 3391697 X + 3388402 3388450 3'utr dm FlyBase G58567.1 ATATACACACACACAAACTACTATTTGAATTAGTTGTTAAAAAATTTAT 7 3388424 0.987064162 5 7 57 1 0.954242509 0.222222222 0.285714286 0.444444444 7 0 0 9 X:3388402-3388450 6 dm FBtr0331605 3385311 3391697 ACTACT 6mer3-8 dme-miR-968-5p X + 3388362 3388442 3'utr dm FlyBase G44302.1 AGTTTAAATATATTTTTATGATTATCAAATTTTTTATATTATATACACACACACAAACTACTATTTGAATTAGTTGTTAAA 13 3388426 0.976669359 7 12 140 0.9375 1.176091259 0.1875 0.230769231 0.375 13 1 0 15 X:3388362-3388442 6 5.5 5016 FBgn0262656 5210.653333 68.99333333 106.66 0.00105553 0.079717847 0.051565723 -6 -8 -7 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 3388918 3388923 + X_3388918_3388923_+ 0.999997359 0.999991244 0.999994301 4.38E-06 dm FBtr0331605 3385311 3391697 X + 3388891 3388962 3'utr dm FlyBase G58571.1 AAGTAAACACAATAAATTACATTTTATGTACCTTCTACATATATAAACTAAATATATTACACAGAACACACA 135 3388917 0.979817993 9 127 1467 0.945205479 2.139879086 0 0.074074074 0.143835616 135 8 0 138 X:3388891-3388962 6 dm FBtr0331605 3385311 3391697 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X + 3388885 3388948 3'utr dm FlyBase G44308.1 TGAGAAAAGTAAACACAATAAATTACATTTTATGTACCTTCTACATATATAAACTAAATATATT 83 3388917 0.992824373 11 76 891 0.923664122 1.480725379 0.022900763 0.481927711 0.671755725 83 7 3 121 X:3388885-3388948 6 105.5 5017 FBgn0262656 5210.653333 68.99333333 106.66 0.020246981 1.52913325 0.98912432 1 1 1 0.1 dme-miR-1012-3p 8mer-A1 TTGACTAA X 3489219 3489226 + X_3489219_3489226_+ 0.609917237 0.609552549 0.609734893 0.000257882 CG10803 FBtr0331612|FBtr0332285 3488215|3488215 3490915|3490915 X + 3489201 3489240 3'utr CG10803 FlyBase G58590.1 CGAGCAAACGCTACCAATTTGACTAAAATTAGTTAAGTGA 15 3489219 0.814163105 2 13 103 0.866666667 1.113943352 0.266666667 0 0 15 2 0 13 X:3489201-3489240 8 CG10803 FBtr0332285|FBtr0331612 3488215|3488215 3490915|3490915 TTGACTAA 8mer-A1 dme-miR-1012-3p X + 3489206 3489253 3'utr CG10803 FlyBase G44325.1 AAACGCTACCAATTTGACTAAAATTAGTTAAGTGAAATTATACTCAAA 13 3489219 0.984350701 4 11 82 0.9 0.954242509 0.15 0.384615385 0.6 13 1 1 18 X:3489206-3489253 8 12.5 5018 FBgn0029666 905.38 23.07666667 35.43666667 0.013806358 0.541672685 0.352741981 0 0 0 0.1 dme-miR-307a-3p 7mer-A1 GTTGTGA X 3489473 3489479 + X_3489473_3489479_+ 0.795746228 0.715486476 0.755616352 0.056752178 CG10803 FBtr0331612|FBtr0332285 3488215|3488215 3490915|3490915 X + 3489435 3489486 3'utr CG10803 FlyBase G58591.1 CTAACCAAATGTTTCCACACGCGTCTGTGAAGTAAACCGTTGTGATCGCTTT 7 3489474 0.978849824 3 7 49 1 0.84509804 0 0 0 7 0 0 7 X:3489435-3489486 7 CG10803 FBtr0332285|FBtr0331612 3488215|3488215 3490915|3490915 GTTGTGA 7mer-A1 dme-miR-307a-3p X + 3489443 3489485 3'utr CG10803 FlyBase G44326.1 ATGTTTCCACACGCGTCTGTGAAGTAAACCGTTGTGATCGCTT 11 3489474 0.98357939 4 9 69 0.823529412 0.84509804 0.117647059 0.545454545 0.705882353 11 2 1 14 X:3489443-3489485 7 8 5019 FBgn0029666 905.38 23.07666667 35.43666667 0.008836069 0.346670519 0.225754868 -1 -1 -1 0.1 dme-miR-980-3p 8mer-A1 GGCAGCTA X 3489594 3489601 + X_3489594_3489601_+ 0.668574993 0.666206432 0.667390713 0.001674853 CG10803 FBtr0331612|FBtr0332285 3488215|3488215 3490915|3490915 X + 3489527 3489645 3'utr CG10803 FlyBase G58592.1 AACTACAAACTACTAAATACTGAATACTGAATACAAAAACAGATAAGCCGGAAAATGAGCCGCAACAGGCAGCTATAAGTTATTTTATATATTTTGTAAACTCGAAATCATTAGGAGTG 28 3489582 0.956221833 10 26 125 0.903225806 1.447158031 0.258064516 0.107142857 0.193548387 28 3 0 28 X:3489527-3489645 8 CG10803 FBtr0332285|FBtr0331612 3488215|3488215 3490915|3490915 GGCAGCTA 8mer-A1 dme-miR-980-3p X + 3489575 3489616 3'utr CG10803 FlyBase G44327.1 CGGAAAATGAGCCGCAACAGGCAGCTATAAGTTATTTTATAT 8 3489602 0.842063711 3 7 19 0.888888889 0.903089987 0.666666667 0.125 0.222222222 8 1 0 8 X:3489575-3489616 8 15.5 5020 FBgn0029666 905.38 23.07666667 35.43666667 0.017119883 0.67167413 0.437400056 12 -8 2 0.1 dme-bantam-3p 7mer-m8 TGATCTC X 3508783 3508789 - X_3508783_3508789_- 0.661612203 0.661593028 0.661602615 1.36E-05 CG32791 FBtr0333795 3507243 3513002 X - 3508763 3508805 3'utr CG32791 FlyBase G64593.1 TTTTTAATTAATTCATTGATCTCTTCTCACAAGGTTGGTTCTC 34 3508789 0.679050608 5 33 321 0.976190476 1.612783857 0 0.205882353 0.357142857 34 1 0 41 X:3508763-3508805 7 CG32791 FBtr0333795 3507243 3513002 TGATCTC 7mer-m8 dme-bantam-3p X - 3508763 3508805 3'utr CG32791 FlyBase G48671.1 TTTTTAATTAATTCATTGATCTCTTCTCACAAGGTTGGTTCTC 15 3508789 0.645855555 5 15 142 1 1.397940009 0 0.466666667 0.68 15 0 0 25 X:3508763-3508805 7 24.5 5021 FBgn0052791 287.9933333 6.18 9.406666667 0.085071414 3.964401294 2.60453579 0 0 0 0.1 dme-miR-276a-3p 6mer3-8 AGTTCC X 3701056 3701061 + X_3701056_3701061_+ 0.999833976 0.999833216 0.999833596 5.66E-07 Mnt FBtr0307278|FBtr0301823|FBtr0343578|FBtr0307277|FBtr0301822 3700740|3700740|3700740|3700740|3700740 3701672|3701672|3701672|3701672|3701672 X + 3701032 3701082 3'utr Mnt FlyBase G58608.1 AGATAAAAACAAAAGCTATCAAACAGTTCCGCCCAACACTTAGCATCGATT 334 3701058 0.8111104 5 332 1151 0.989821883 2.288919606 0.022900763 0.161676647 0.287531807 334 3 1 389 X:3701032-3701082 6 Mnt FBtr0307277|FBtr0301822|FBtr0301823|FBtr0343578|FBtr0307278 3700740|3700740|3700740|3700740|3700740 3701672|3701672|3701672|3701672|3701672 AGTTCC 6mer3-8 dme-miR-276a-3p X + 3701035 3701083 3'utr Mnt FlyBase G44338.1 TAAAAACAAAAGCTATCAAACAGTTCCGCCCAACACTTAGCATCGATTT 165 3701058 0.782742676 4 164 559 0.984555985 1.707570176 0.015444015 0.424242424 0.633204633 165 0 4 255 X:3701035-3701083 6 248.5 5022 FBgn0023215 795.77 23.85 36.51 0.31227616 10.41928721 6.806354423 -2 -2 -2 0.1 dme-miR-277-3p 6mer3-8 TGCATT X 3705060 3705065 - X_3705060_3705065_- 0.999939984 0.999998843 0.999969413 4.16E-05 Rala FBtr0070583|FBtr0070584|FBtr0070582 3704982|3704608|3704982 3707374|3707374|3706146 X - 3705037 3705075 3'utr Rala FlyBase G64618.1 TTTGTATAACTGCATTCTGTATTGTAATATTTAAGCTAT 10 3705061 0.780215803 5 10 111 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 X:3705037-3705075 6 Rala FBtr0070583|FBtr0070584|FBtr0070582 3704982|3704608|3704982 3707374|3707374|3706146 TGCATT 6mer3-8 dme-miR-277-3p X - 3705005 3705083 3'utr Rala FlyBase G48689.1 TGTTTACTTTTGTATAACTGCATTCTGTATTGTAATATTTAAGCTATTATTATTATGATAATTATTATTATTATTAAAT 13 3705060 0.99074505 7 13 144 1 1.361727836 0 0.461538462 0.695652174 13 0 0 23 X:3705005-3705083 6 10 5023 FBgn0015286 835.0366667 45.75666667 69.86666667 0.011975522 0.218547388 0.143129771 -4 -5 -4.5 0.1 dme-miR-965-3p 7mer-A1 ACGCTTA X 3705658 3705664 - X_3705658_3705664_- 0.823333151 0.823310686 0.823321919 1.59E-05 Rala FBtr0070583|FBtr0070584|FBtr0070582 3704982|3704608|3704982 3707374|3707374|3706146 X - 3705639 3705683 3'utr Rala FlyBase G64620.1 AAACCTAAAGCTGAAGCTAACGCTTAAACATATTAAATATAATCA 6 3705666 0.940817106 2 6 31 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 X:3705639-3705683 7 Rala FBtr0070583|FBtr0070584|FBtr0070582 3704982|3704608|3704982 3707374|3707374|3706146 ACGCTTA 7mer-A1 dme-miR-965-3p X - 3705625 3705678 3'utr Rala FlyBase G48690.1 TAAAGCTGAAGCTAACGCTTAAACATATTAAATATAATCATCAATCGTAGACAA 5 3705666 0.938185392 3 5 22 1 0.77815125 0 0.2 0.333333333 5 0 0 6 X:3705625-3705678 7 5 5024 FBgn0015286 835.0366667 45.75666667 69.86666667 0.005987761 0.109273694 0.071564885 2 2 2 0.1 dme-bantam-3p 6mer3-8 TGATCT X 3706238 3706243 - X_3706238_3706243_- 0.999999881 0.999995929 0.999997905 2.83E-06 Rala FBtr0070583|FBtr0070584 3704982|3704608 3707374|3707374 X - 3706216 3706253 intron-3'utr Rala FlyBase G64622.1 AGGTATTTTATGATCTAATCAGGGATATTTCATCGCGT 8 3706243 0.747518503 2 8 84 1 0.903089987 0.375 0 0 8 0 0 8 X:3706216-3706253 6 Rala FBtr0070583|FBtr0070584 3704982|3704608 3707374|3707374 TGATCT 6mer3-8 dme-bantam-3p X - 3706224 3706252 intron-3'utr Rala FlyBase G48692.1 GGTATTTTATGATCTAATCAGGGATATTT 5 3706244 0.963311441 3 5 40 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 X:3706224-3706252 6 6.5 5025 FBgn0015286 835.0366667 45.75666667 69.86666667 0.007784089 0.142055802 0.093034351 0 1 0.5 0.1 dme-miR-308-3p 7mer-m1 TGTGATT X 3787057 3787063 + X_3787057_3787063_+ 0.521223306 0.521223846 0.521223576 3.54E-07 tlk FBtr0299581|FBtr0070596|FBtr0333753|FBtr0299582|FBtr0299580|FBtr0299579|FBtr0333751 3786403|3786403|3786403|3786403|3786403|3786403|3786403 3787977|3787977|3789770|3787977|3788818|3787977|3789770 X + 3787030 3787139 3'utr tlk FlyBase G58647.1 AACAAATTATTGCATTATCTGCTGGATTGTGATTGTGGTTCAAACATTAAAAATACACTTACTCATACACACAAGGTAGACACTGCAGACTAATTTTGCCTTAAAAGAAA 58 3787062 0.98275765 15 54 495 0.945945946 1.84509804 0.175675676 0.172413793 0.351351351 58 4 0 70 X:3787030-3787139 7 tlk FBtr0333751|FBtr0299582|FBtr0299580|FBtr0299579|FBtr0070596|FBtr0333753|FBtr0299581 3786403|3786403|3786403|3786403|3786403|3786403|3786403 3789770|3787977|3788818|3787977|3787977|3789770|3787977 TGTGATT 7mer-m1 dme-miR-308-3p X + 3787029 3787077 3'utr tlk FlyBase G44367.1 TAACAAATTATTGCATTATCTGCTGGATTGTGATTGTGGTTCAAACATT 38 3787063 0.80106654 9 35 391 0.915254237 1.431363764 0.203389831 0.421052632 0.627118644 38 4 1 54 X:3787029-3787077 7 37 5026 FBgn0086899 3401.553333 62.96 97.16333333 0.010877383 0.587674714 0.380802086 -5 -6 -5.5 0.1 dme-miR-34-5p 6mer3-8 CACTGC X 3787110 3787115 + X_3787110_3787115_+ 0.998888498 0.99994137 0.999414934 0.000744513 tlk FBtr0299581|FBtr0070596|FBtr0333753|FBtr0299582|FBtr0299580|FBtr0299579|FBtr0333751 3786403|3786403|3786403|3786403|3786403|3786403|3786403 3787977|3787977|3789770|3787977|3788818|3787977|3789770 X + 3787030 3787139 3'utr tlk FlyBase G58647.1 AACAAATTATTGCATTATCTGCTGGATTGTGATTGTGGTTCAAACATTAAAAATACACTTACTCATACACACAAGGTAGACACTGCAGACTAATTTTGCCTTAAAAGAAA 58 3787113 0.98275765 15 54 495 0.945945946 1.84509804 0.175675676 0.172413793 0.351351351 58 4 0 70 X:3787030-3787139 6 tlk FBtr0333751|FBtr0299582|FBtr0299580|FBtr0299579|FBtr0070596|FBtr0333753|FBtr0299581 3786403|3786403|3786403|3786403|3786403|3786403|3786403 3789770|3787977|3788818|3787977|3787977|3789770|3787977 CACTGC 6mer3-8 dme-miR-34-5p X + 3787084 3787139 3'utr tlk FlyBase G44368.1 ACACTTACTCATACACACAAGGTAGACACTGCAGACTAATTTTGCCTTAAAAGAAA 15 3787113 0.973749304 7 15 90 1 1.255272505 0.277777778 0.2 0.333333333 15 0 0 18 X:3787084-3787139 6 17.5 5027 FBgn0086899 3401.553333 62.96 97.16333333 0.005144708 0.277954257 0.180109095 -3 -3 -3 0.1 dme-miR-14-3p 8mer-A1 AAGACTGA X 3791691 3791698 + X_3791691_3791698_+ 0.643559465 0.643563428 0.643561447 2.76E-06 HIP-R FBtr0070597|FBtr0333764|FBtr0070598 3791667|3791667|3791667 3792477|3792477|3792477 X + 3791616 3791710 stop_codon HIP-R FlyBase G58657.1 AGCCTAAGCCTAAAAAGGACTCCGCCGACTTCGTCGATGACGGTTTGGACTAAGGTTTAGAAATGGGGCAGTAGTAAGACTGAAACATGCGTCGA 131 3791690 0.774859864 7 111 444 0.854304636 1.508529719 0.046357616 0.13740458 0.251655629 131 19 3 129 X:3791616-3791710 8 HIP-R FBtr0070598|FBtr0333764|FBtr0070597 3791667|3791667|3791667 3792477|3792477|3792477 AAGACTGA 8mer-A1 dme-miR-14-3p X + 3791656 3791725 stop_codon HIP-R FlyBase G44375.1 CGGTTTGGACTAAGGTTTAGAAATGGGGCAGTAGTAAGACTGAAACATGCGTCGATAAAAAGAAGTTAAC 91 3791690 0.929287388 6 81 304 0.905511811 1.759667845 0.023622047 0.274725275 0.480314961 91 11 1 115 X:3791656-3791725 8 104 5028 FBgn0029676 2406.406667 147.0733333 226.7733333 0.043217965 0.70713023 0.458607714 1 1 1 0.1 dme-miR-318-3p 7mer-A1 CCAGTGA X 3792435 3792441 + X_3792435_3792441_+ 0.822665095 0.439827881 0.631246488 0.27070678 HIP-R FBtr0070597|FBtr0333764|FBtr0070598 3791667|3791667|3791667 3792477|3792477|3792477 X + 3792424 3792453 3'utr HIP-R FlyBase G58661.1 CACTCATTCAACCAGTGATCAATGGAAATA 11 3792446 0.919570354 3 11 53 1 1.146128036 0.714285714 0.272727273 0.428571429 11 0 0 14 X:3792424-3792453 7 HIP-R FBtr0070598|FBtr0333764|FBtr0070597 3791667|3791667|3791667 3792477|3792477|3792477 CCAGTGA 7mer-A1 dme-miR-318-3p X + 3792425 3792449 3'utr HIP-R FlyBase G44378.1 ACTCATTCAACCAGTGATCAATGGA 6 3792446 0.934188323 2 6 27 1 1.079181246 0.666666667 0.666666667 0.833333333 6 0 0 12 X:3792425-3792449 7 8.5 5029 FBgn0029676 2406.406667 147.0733333 226.7733333 0.003532238 0.057794298 0.037482361 -11 -11 -11 0.1 dme-miR-14-3p 8mer-A1 AAGACTGA X 3800774 3800781 + X_3800774_3800781_+ 0.643559914 0.64356188 0.643560897 1.41E-06 HIP FBtr0070600 3800750 3801570 X + 3800738 3800796 stop_codon HIP FlyBase G58667.1 ACGGTTTGGACTAAGGTTTAGAAATGGGGCAGTAGTAAGACTGAAACATGCGTCGATAA 135 3800773 0.919593036 4 128 441 0.947976879 2.214843848 0 0.22962963 0.398843931 135 9 0 164 X:3800738-3800796 8 HIP FBtr0070600 3800750 3801570 AAGACTGA 8mer-A1 dme-miR-14-3p X + 3800739 3800793 stop_codon HIP FlyBase G44380.1 CGGTTTGGACTAAGGTTTAGAAATGGGGCAGTAGTAAGACTGAAACATGCGTCGA 83 3800773 0.912816725 5 77 256 0.959016393 1.767155866 0 0.34939759 0.557377049 83 4 1 117 X:3800739-3800793 8 107 5030 FBgn0260484 933.6966667 55.94 86.52333333 0.114598246 1.912763675 1.236660631 1 1 1 0.1 dme-miR-318-3p 7mer-A1 CCAGTGA X 3801528 3801534 + X_3801528_3801534_+ 0.823349562 0.793765212 0.808557387 0.02091933 HIP FBtr0070600 3800750 3801570 X + 3801468 3801547 3'utr HIP FlyBase G58671.1 GAAAGCAATCGCCCATTCATTCACACACTCATTCACACACTCATTCACACACTCATTCAACCAGTGATCAATGGAAATAA 11 3801539 0.955657577 7 11 52 1 1.146128036 0.285714286 0.181818182 0.357142857 11 0 0 14 X:3801468-3801547 7 HIP FBtr0070600 3800750 3801570 CCAGTGA 7mer-A1 dme-miR-318-3p X + 3801521 3801542 3'utr HIP FlyBase G44383.1 CATTCAACCAGTGATCAATGGA 9 3801539 0.898780532 3 9 35 1 1.079181246 0.5 0.333333333 0.5 9 0 0 12 X:3801521-3801542 7 8.5 5031 FBgn0260484 933.6966667 55.94 86.52333333 0.009103599 0.151948516 0.098239396 -11 -11 -11 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA X 3856620 3856625 + X_3856620_3856625_+ 0.995816703 0.994071825 0.994944264 0.001233831 ec FBtr0112801|FBtr0070606|FBtr0112802 3856584|3856584|3856584 3857621|3857621|3857621 X + 3856544 3856789 stop_codon ec FlyBase G58686.1 AACTGCGAGTACTACCTGCAGATGCTGAACCAGCGCAGATGATGATGATTCGACACTCGACCATCGACCATCTCTAGTGCAACTTTCTAGCCGTACATGGAACCCGTTAATCTCAAGCATTAAAATGCTGCCACGTCGCCAATAAGGAGCCGCCAAGGATGTACATAGCATGCTTACAAATACATAGATAGGTGTAAGGATATAAAGTGGTGCCAGCTAACAGGCGAATTGCATGGACCCGGACTC 191 3856628 0.970774783 25 181 1041 0.938016529 1.878904602 0.123966942 0.204188482 0.371900826 191 13 2 227 X:3856544-3856789 6 ec FBtr0112802|FBtr0112801|FBtr0070606 3856584|3856584|3856584 3857621|3857621|3857621 GTGCAA 6mer3-8 dme-miR-92b-3p X + 3856594 3856715 3'utr ec FlyBase G44391.1 CGACACTCGACCATCGACCATCTCTAGTGCAACTTTCTAGCCGTACATGGAACCCGTTAATCTCAAGCATTAAAATGCTGCCACGTCGCCAATAAGGAGCCGCCAAGGATGTACATAGCATG 133 3856628 0.932940516 14 124 696 0.935960591 1.801632346 0.108374384 0.406015038 0.610837438 133 11 2 190 X:3856594-3856715 6 81 5032 FBgn0000542 46.02 0.82 1.256666667 1.760104302 98.7804878 64.45623342 -8 -8 -8 0.1 dme-miR-1007-3p 7mer-m8 TGAGCTT X 3857276 3857282 + X_3857276_3857282_+ 0.620203442 0.620201457 0.620202449 1.34E-06 ec FBtr0112801|FBtr0070606|FBtr0112802 3856584|3856584|3856584 3857621|3857621|3857621 X + 3857128 3857322 3'utr ec FlyBase G58688.1 ACCCAAAGCCTGACCAGTCGTCCGCCTCCATAAACCACATTAGTGCTTTTTGTTTCGACATCGAATTTTATTTACATTTTTTTACCTAAGCTAACTAAATACGATTTATTTCTCTGTGTGAGACGCCAGCAGTTTGAAACTTGGTCGTTGAGCTTCCTTGTGCGTGCTGTTGTCCAACGACACTCGCACTTCCAT 55 3857276 0.986226984 26 54 447 0.984126984 1.792391689 0.206349206 0.109090909 0.222222222 55 1 0 62 X:3857128-3857322 7 ec FBtr0112802|FBtr0112801|FBtr0070606 3856584|3856584|3856584 3857621|3857621|3857621 TGAGCTT 7mer-m8 dme-miR-1007-3p X + 3857263 3857303 3'utr ec FlyBase G44395.1 GAAACTTGGTCGTTGAGCTTCCTTGTGCGTGCTGTTGTCCA 31 3857285 0.703249831 6 28 295 0.913043478 1.322219295 0.304347826 0.322580645 0.543478261 31 3 1 42 X:3857263-3857303 7 24.5 5033 FBgn0000542 46.02 0.82 1.256666667 0.532377227 29.87804878 19.49602122 0 -9 -4.5 0.1 dme-miR-307a-3p 6mer2-7 GTTGTG X 3878650 3878655 + X_3878650_3878655_+ 0.999999756 0.992671129 0.996335443 0.005182173 CG2930 FBtr0070609|FBtr0340202|FBtr0070610|FBtr0340201 3878616|3878616|3878616|3878616 3878817|3878817|3878817|3878817 X + 3878611 3878671 stop_codon CG2930 FlyBase G58702.1 CGAGTAGACCTCAAACCGATTCGTCCTGCTTGCTCCCGCGTTGTGTATTATATATATATAT 24 3878637 0.714553839 7 22 170 0.961538462 1.096910013 0.269230769 0.083333333 0.153846154 24 0 1 25 X:3878611-3878671 6 CG2930 FBtr0070610|FBtr0340201|FBtr0070609|FBtr0340202 3878616|3878616|3878616|3878616 3878817|3878817|3878817|3878817 GTTGTG 6mer2-7 dme-miR-307a-3p X + 3878616 3878693 stop_codon CG2930 FlyBase G44405.1 AGACCTCAAACCGATTCGTCCTGCTTGCTCCCGCGTTGTGTATTATATATATATATATTTGTACTTGTAGATGTGTAT 13 3878637 0.748939526 7 11 102 0.875 0.669006781 0.0625 0.230769231 0.375 13 0 2 14 X:3878616-3878693 6 7 5034 FBgn0028491 113 4.37 6.676666667 0.061946903 1.601830664 1.048427359 13 13 13 0.1 dme-miR-8-3p 7mer-A1 AGTATTA X 3882633 3882639 + X_3882633_3882639_+ 0.82334876 0.823129523 0.823239141 0.000155069 VhaAC39-1 FBtr0070611 3882468 3882967 X + 3882601 3882655 3'utr VhaAC39-1 FlyBase G58712.1 ATGATACCGAGTCTGTATGTTTGTATGTAGCGAGTATTATTGCCGGTCCAGGCAA 12 3882640 0.979120639 6 11 83 1 1.113943352 0.153846154 0.083333333 0.153846154 12 0 0 13 X:3882601-3882655 7 VhaAC39-1 FBtr0070611 3882468 3882967 AGTATTA 7mer-A1 dme-miR-8-3p X + 3882623 3882707 3'utr VhaAC39-1 FlyBase G44416.1 GTATGTAGCGAGTATTATTGCCGGTCCAGGCAAATTTTTGTCAAGTGTTCAGACCCAAGCCTAGATTTCTCAGTTTCCGCGGCTC 10 3882641 0.984412347 6 7 64 0.8 1.079181246 0.2 0.4 0.6 10 3 0 12 X:3882623-3882707 7 7.5 5035 FBgn0028665 905.2066667 61.01 92.86666667 0.008285401 0.122930667 0.080760948 -7 -8 -7.5 0.1 dme-miR-184-5p 6mer3-8 TGATAA X 3882927 3882932 + X_3882927_3882932_+ 0.686167328 0.969663471 0.827915399 0.200462085 VhaAC39-1 FBtr0070611 3882468 3882967 X + 3882901 3882936 3'utr VhaAC39-1 FlyBase G58714.1 ACTTATACAAGAACTACATATGTGAATGATAAATCA 22 3882927 0.774460089 4 22 133 1 1.380211242 0 0.090909091 0.166666667 22 0 0 24 X:3882901-3882936 6 VhaAC39-1 FBtr0070611 3882468 3882967 TGATAA 6mer3-8 dme-miR-184-5p X + 3882894 3882932 3'utr VhaAC39-1 FlyBase G44417.1 AATGCATACTTATACAAGAACTACATATGTGAATGATAA 15 3882927 0.769106522 5 14 93 0.916666667 1.342422681 0 0.4 0.625 15 2 0 22 X:3882894-3882932 6 18.5 5036 FBgn0028665 905.2066667 61.01 92.86666667 0.020437322 0.303228979 0.199210337 0 0 0 0.1 dme-miR-304-5p 6mer3-8 TGAGAT X 3932508 3932513 - X_3932508_3932513_- 0.999825672 0.999999996 0.999912834 0.000123249 CG2938 FBtr0332387|FBtr0070627|FBtr0345712 3932154|3932154|3931998 3932955|3932955|3932955 X - 3932483 3932535 3'utr CG2938 FlyBase G64648.1 AAATCGTAGTCAACTCTCGAAATGAGATGTAAAACCTTACTTAATGCAATTTC 5 3932513 0.973831001 4 5 33 1 0.698970004 0 0 0 5 0 0 5 X:3932483-3932535 6 CG2938 FBtr0345712|FBtr0332387|FBtr0070627 3931998|3932154|3932154 3932955|3932955|3932955 TGAGAT 6mer3-8 dme-miR-304-5p X - 3932489 3932565 3'utr CG2938 FlyBase G48714.1 TGAAAAGTGCGTGTCATAGCTATAAGAAGAAAATCGTAGTCAACTCTCGAAATGAGATGTAAAACCTTACTTAATGC 10 3932513 0.953773169 6 10 49 1 1.204119983 0.25 0.4 0.625 10 0 0 16 X:3932489-3932565 6 3.5 5037 FBgn0029685 940.7366667 30.01333333 45.98666667 0.003720489 0.116614838 0.076109017 0 0 0 0.1 dme-miR-190-5p 6mer3-8 ACATAT X 3939838 3939843 + X_3939838_3939843_+ 0.810316602 0.927303836 0.868810219 0.082722442 CG2941 FBtr0070613|FBtr0345711 3939668|3939668 3940006|3940582 X + 3939807 3939860 3'utr CG2941 FlyBase G58719.1 TGTCCTTTAAAAGGATGACTGTATGCACATAACATATGTACTACTGCCTTGCAA 14 3939843 0.978329834 3 14 99 1 1.255272505 0.166666667 0.214285714 0.388888889 14 0 0 18 X:3939807-3939860 6 CG2941 FBtr0070613|FBtr0345711 3939668|3939668 3940006|3940582 ACATAT 6mer3-8 dme-miR-190-5p X + 3939817 3939860 3'utr CG2941 FlyBase G44420.1 AAGGATGACTGTATGCACATAACATATGTACTACTGCCTTGCAA 10 3939843 0.975294405 2 10 66 1 1.079181246 0.083333333 0.2 0.333333333 10 0 0 12 X:3939817-3939860 6 11 5038 FBgn0029686 285.74 9.48 14.62333333 0.038496535 1.160337553 0.752222475 -5 -5 -5 0.1 dme-miR-1012-3p 7mer-A1 TGACTAA X 3953149 3953155 + X_3953149_3953155_+ 0.823349562 0.823349561 0.823349562 0 Vap-33A FBtr0070618|FBtr0342739|FBtr0070617|FBtr0070616 3952921|3952921|3952921|3952921 3955442|3955442|3954086|3954086 X + 3953125 3953206 3'utr Vap-33A FlyBase G58731.1 AAACCACAGAGACGAATGTAAAGCTGACTAAACCGGGGACCGTATACATTTAAACGGTTGTATTGAAAATCAAAAATAATCA 19 3953149 0.930710976 6 18 69 0.95 0.977723605 0.1 0.052631579 0.1 19 0 1 19 X:3953125-3953206 7 Vap-33A FBtr0070616|FBtr0070617|FBtr0342739|FBtr0070618 3952921|3952921|3952921|3952921 3954086|3954086|3955442|3955442 TGACTAA 7mer-A1 dme-miR-1012-3p X + 3953131 3953176 3'utr Vap-33A FlyBase G44430.1 CAGAGACGAATGTAAAGCTGACTAAACCGGGGACCGTATACATTTA 9 3953149 0.941309821 4 6 24 0.8125 1.113943352 0.25 0.625 0.8125 8 3 0 13 X:3953131-3953176 7 12 5039 FBgn0029687 3606.676667 166.3933333 255.1133333 0.003327163 0.072118274 0.047037918 0 0 0 0.1 dme-miR-13b-2-5p 7mer-m1 TTGACGC X 3953372 3953378 + X_3953372_3953378_+ 0.56746674 0.452035942 0.509751341 0.081621901 Vap-33A FBtr0070618|FBtr0342739|FBtr0070617|FBtr0070616 3952921|3952921|3952921|3952921 3955442|3955442|3954086|3954086 X + 3953362 3953393 3'utr Vap-33A FlyBase G58732.1 TTAAGCTGTATTGACGCTTCGTGTATTTCAAC 6 3953372 0.865413597 5 6 40 1 0.77815125 0.666666667 0 0 6 0 0 6 X:3953362-3953393 7 Vap-33A FBtr0070616|FBtr0070617|FBtr0342739|FBtr0070618 3952921|3952921|3952921|3952921 3954086|3954086|3955442|3955442 TTGACGC 7mer-m1 dme-miR-13b-2-5p X + 3953361 3953394 3'utr Vap-33A FlyBase G44431.1 TTTAAGCTGTATTGACGCTTCGTGTATTTCAACC 7 3953372 0.730922732 3 7 53 1 1.079181246 0.5 0.428571429 0.666666667 7 0 0 12 X:3953361-3953394 7 6 5040 FBgn0029687 3606.676667 166.3933333 255.1133333 0.001663581 0.036059137 0.023518959 0 0 0 0.1 dme-miR-277-3p 7mer-m8 TGCATTT X 3953705 3953711 + X_3953705_3953711_+ 0.620203954 0.620203782 0.620203868 1.41E-07 Vap-33A FBtr0070618|FBtr0342739|FBtr0070617|FBtr0070616 3952921|3952921|3952921|3952921 3955442|3955442|3954086|3954086 X + 3953689 3953727 3'utr Vap-33A FlyBase G58734.1 TGCTCAGATTTTCGATTGCATTTTTTCGCTATTATTAAT 11 3953704 0.812998988 2 11 138 1 1.113943352 0.153846154 0.181818182 0.307692308 11 0 0 13 X:3953689-3953727 7 Vap-33A FBtr0070616|FBtr0070617|FBtr0342739|FBtr0070618 3952921|3952921|3952921|3952921 3954086|3954086|3955442|3955442 TGCATTT 7mer-m8 dme-miR-277-3p X + 3953689 3953730 3'utr Vap-33A FlyBase G44433.1 TGCTCAGATTTTCGATTGCATTTTTTCGCTATTATTAATTTG 8 3953704 0.763923886 4 8 92 1 0.954242509 0.444444444 0.125 0.222222222 8 0 0 9 X:3953689-3953730 7 9 5041 FBgn0029687 3606.676667 166.3933333 255.1133333 0.002495372 0.054088705 0.035278438 1 1 1 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA X 3954292 3954299 + X_3954292_3954299_+ 0.624748559 0.623487269 0.624117914 0.000891874 Vap-33A FBtr0070618|FBtr0342739 3952921|3952921 3955442|3955442 X + 3954231 3954312 3'utr Vap-33A FlyBase G58735.1 CGCGGACGGCGGCTCTATATATACATATTTATATATAATCATTATTGTTTTGGTTGGCATTTGCATTTACTAAGTTTCGTTT 28 3954291 0.987945231 6 28 331 1 1.531478917 0.117647059 0.214285714 0.352941176 28 0 0 34 X:3954231-3954312 8 Vap-33A FBtr0342739|FBtr0070618 3952921|3952921 3955442|3955442 TGCATTTA 8mer-A1 dme-miR-277-3p X + 3954274 3954311 3'utr Vap-33A FlyBase G44434.1 ATTGTTTTGGTTGGCATTTGCATTTACTAAGTTTCGTT 10 3954291 0.7814271 3 10 113 1 1.113943352 0 0.3 0.461538462 10 0 0 13 X:3954274-3954311 8 17 5042 FBgn0029687 3606.676667 166.3933333 255.1133333 0.00471348 0.102167555 0.06663705 1 1 1 0.1 dme-miR-252-5p 6mer3-8 GTACTT X 3955039 3955044 + X_3955039_3955044_+ 0.999985518 0.999999987 0.999992752 1.03E-05 Vap-33A FBtr0070618|FBtr0342739 3952921|3952921 3955442|3955442 X + 3955029 3955061 3'utr Vap-33A FlyBase G58738.1 TAAGCAAATTGTACTTGATGTCAGCTGTAGCAA 5 3955038 0.782655238 2 5 33 1 0.84509804 0 0.4 0.571428571 5 0 0 7 X:3955029-3955061 6 Vap-33A FBtr0342739|FBtr0070618 3952921|3952921 3955442|3955442 GTACTT 6mer3-8 dme-miR-252-5p X + 3955030 3955056 3'utr Vap-33A FlyBase G44435.1 AAGCAAATTGTACTTGATGTCAGCTGT 7 3955039 0.676958841 3 7 47 1 1.041392685 0.545454545 0.428571429 0.636363636 7 0 0 11 X:3955030-3955056 6 5.5 5043 FBgn0029687 3606.676667 166.3933333 255.1133333 0.00152495 0.033054209 0.021559046 1 0 0.5 0.1 dme-miR-986-5p 6mer2-7 TTCGAG X 3955674 3955679 - X_3955674_3955679_- 0.717060022 0.655685252 0.686372637 0.043398467 lva FBtr0342740|FBtr0070626 3955541|3955541 3955874|3955874 X - 3955650 3955784 3'utr lva FlyBase G64659.1 TCGATCCTGGCCTTCCTTGTGCGGACAATGGCAATAGCATTAGAGTTCTTTATACGATATTATGTACCTTGGCTAGCTAAAAAAAAAAGCTCATCCCCTTGGCCGTTCGAGCCGTATTCCCGATTTGTTCCAAAC 149 3955685 0.830515181 20 147 1000 0.988950276 2.252853031 0.270718232 0.174496644 0.320441989 149 2 0 179 X:3955650-3955784 6 lva FBtr0342740|FBtr0070626 3955541|3955541 3955874|3955874 TTCGAG 6mer2-7 dme-miR-986-5p X - 3955662 3955731 3'utr lva FlyBase G48722.2 ACGATATTATGTACCTTGGCTAGCTAAAAAAAAAAGCTCATCCCCTTGGCCGTTCGAGCCGTATTCCCGA 70 3955685 0.828077528 6 66 456 0.952830189 2.004321374 0.29245283 0.4 0.603773585 70 5 0 101 X:3955662-3955731 6 52 5044 FBgn0029688 1838.776667 23.96333333 36.82333333 0.028279671 2.169981917 1.412148095 6 6 6 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 3955716 3955721 - X_3955716_3955721_- 0.9608253 0.994640717 0.977733008 0.023911099 lva FBtr0342740|FBtr0070626 3955541|3955541 3955874|3955874 X - 3955650 3955784 3'utr lva FlyBase G64659.1 TCGATCCTGGCCTTCCTTGTGCGGACAATGGCAATAGCATTAGAGTTCTTTATACGATATTATGTACCTTGGCTAGCTAAAAAAAAAAGCTCATCCCCTTGGCCGTTCGAGCCGTATTCCCGATTTGTTCCAAAC 149 3955722 0.830515181 20 147 1000 0.988950276 2.252853031 0.270718232 0.174496644 0.320441989 149 2 0 179 X:3955650-3955784 6 lva FBtr0342740|FBtr0070626 3955541|3955541 3955874|3955874 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X - 3955662 3955731 3'utr lva FlyBase G48722.2 ACGATATTATGTACCTTGGCTAGCTAAAAAAAAAAGCTCATCCCCTTGGCCGTTCGAGCCGTATTCCCGA 70 3955722 0.828077528 6 66 456 0.952830189 2.004321374 0.29245283 0.4 0.603773585 70 5 0 101 X:3955662-3955731 6 50.5 5045 FBgn0029688 1838.776667 23.96333333 36.82333333 0.027463912 2.107386285 1.371413053 1 1 1 0.1 dme-miR-1006-3p 6mer2-7 GAATTT X 4098114 4098119 - X_4098114_4098119_- 0.964917884 0.986907608 0.975912746 0.015549066 CG6379 FBtr0343297|FBtr0070671 4097590|4097916 4098173|4098173 X - 4098104 4098143 3'utr CG6379 FlyBase G64690.1 AACTATACATAAGGATACATATGTGAATTTCCTTTTTTTT 12 4098116 0.782979903 6 10 102 0.846153846 1.041392685 0 0.083333333 0.153846154 12 2 0 11 X:4098104-4098143 6 CG6379 FBtr0343297|FBtr0070671 4097590|4097916 4098173|4098173 GAATTT 6mer2-7 dme-miR-1006-3p X - 4098110 4098137 3'utr CG6379 FlyBase G48744.1 ACATAAGGATACATATGTGAATTTCCTT 6 4098115 0.783096857 3 6 43 1 1 0.3 0.333333333 0.6 6 0 0 10 X:4098110-4098137 6 9 5046 FBgn0029693 315.06 11.47 17.60333333 0.028565987 0.784655623 0.511266806 -3 -4 -3.5 0.1 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA X 4105606 4105613 + X_4105606_4105613_+ 0.57133832 0.578808085 0.575073203 0.005281946 brn FBtr0070638 4105462 4105791 X + 4105551 4105634 3'utr brn FlyBase G58739.1 ATTAGGAGCAGTGGATGATACCTCAACCGTTCAGTGAGACTTTAAACCAAGCAGCTGGTGCTAATAGTGCAAGATCGCAAGAGT 25 4105615 0.974113365 6 22 132 0.888888889 1.380211242 0.148148148 0.125 0.222222222 24 3 0 24 X:4105551-4105634 8 brn FBtr0070638 4105462 4105791 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" X + 4105554 4105627 3'utr brn FlyBase G44436.1 AGGAGCAGTGGATGATACCTCAACCGTTCAGTGAGACTTTAAACCAAGCAGCTGGTGCTAATAGTGCAAGATCG 16 4105592 0.968687245 6 14 77 0.904761905 0.977723605 0.142857143 0.25 0.428571429 16 1 1 19 X:4105554-4105627 8 11 5047 FBgn0000221 55.33333333 4.63 7.023333333 0.198795181 2.375809935 1.566207879 -9 14 2.5 0.1 dme-bantam-3p 8mer-A1 TGATCTCA X 4115169 4115176 - X_4115169_4115176_- 0.631135993 0.631129173 0.631132583 4.81E-06 Tip60 FBtr0333185 4114798 4115309 X - 4115113 4115189 5'utr Tip60 FlyBase G64713.1 AAAAAAGAGGACGTGATCTCAACGCTGCAGAACCTGAACCTGATCAACTACTACAAGGGCCAGTACATCGTGTGCAT 41 4115176 0.92780075 9 38 137 0.9375 1.352182518 0.166666667 0.146341463 0.270833333 41 2 1 45 X:4115113-4115189 8 Tip60 FBtr0333185 4114798 4115309 TGATCTCA 8mer-A1 dme-bantam-3p X - 4115128 4115189 5'utr Tip60 FlyBase G48758.1 AAAAAAGAGGACGTGATCTCAACGCTGCAGAACCTGAACCTGATCAACTACTACAAGGGCCA 16 4115176 0.952559721 3 15 50 0.964285714 1.431363764 0.178571429 0.5625 0.75 16 1 0 27 X:4115128-4115189 8 17 5048 FBgn0026080 257.65 13.78333333 21.11666667 0.065980982 1.23337364 0.805051302 0 0 0 0.1 dme-miR-965-3p 7mer-m8 TACGCTT X 4126243 4126249 + X_4126243_4126249_+ 0.620204741 0.614497466 0.617351103 0.0040356 tyf FBtr0301124|FBtr0345713|FBtr0305179|FBtr0305180|FBtr0070643|FBtr0305184|FBtr0305183|FBtr0305185 4125993|4125993|4125993|4125993|4125993|4125993|4125993|4125993 4128947|4130016|4128947|4128947|4126742|4128947|4128947|4126742 X + 4126230 4126297 3'utr tyf FlyBase G58758.1 ATTGCAATAATGATACGCTTTAATGCTAATTAATGTAACGAGTCGATAGCCGAACTATTGATTAACTT 11 4126243 0.853841916 5 11 76 1 1.146128036 0 0.272727273 0.428571429 11 0 0 14 X:4126230-4126297 7 tyf FBtr0305183|FBtr0305185|FBtr0070643|FBtr0305184|FBtr0305179|FBtr0305180|FBtr0301124|FBtr0345713 4125993|4125993|4125993|4125993|4125993|4125993|4125993|4125993 4128947|4126742|4126742|4128947|4128947|4128947|4128947|4130016 TACGCTT 7mer-m8 dme-miR-965-3p X + 4126190 4126293 3'utr tyf FlyBase G44450.1 TGTTTATATATCTACCGATATCGTACACACACTATATATTATTGCAATAATGATACGCTTTAATGCTAATTAATGTAACGAGTCGATAGCCGAACTATTGATTA 12 4126244 0.981882681 10 12 83 1 1.255272505 0.111111111 0.416666667 0.611111111 12 0 0 18 X:4126190-4126293 7 5 5049 FBgn0026083 3003.736667 42.11 64.35333333 0.001664593 0.118736642 0.077696053 0 -1 -0.5 0.1 dme-miR-317-3p 6mer3-8 TGTGTT X 4126872 4126877 + X_4126872_4126877_+ 0.792757776 0.898687239 0.845722508 0.074903397 tyf FBtr0301124|FBtr0345713|FBtr0305179|FBtr0305180|FBtr0305184|FBtr0305183 4125993|4125993|4125993|4125993|4125993|4125993 4128947|4130016|4128947|4128947|4128947|4128947 X + 4126771 4126883 3'utr tyf FlyBase G58762.1 TTTGGGCGCGTTGTTTGGAGGAAATCCTAATCCTAGATATTAAACCGAGTCAACGTCGCGTGTACATAGTGGACCAGAAGTCGTGTGGGCAGTTCGATCTCTGTGTTATGGAT 37 4126872 0.978892241 10 37 255 1 1.633468456 0.511627907 0.135135135 0.255813953 37 0 0 43 X:4126771-4126883 6 tyf FBtr0305183|FBtr0305184|FBtr0305179|FBtr0305180|FBtr0301124|FBtr0345713 4125993|4125993|4125993|4125993|4125993|4125993 4128947|4128947|4128947|4128947|4128947|4130016 TGTGTT 6mer3-8 dme-miR-317-3p X + 4126838 4126884 3'utr tyf FlyBase G44452.1 AGTGGACCAGAAGTCGTGTGGGCAGTTCGATCTCTGTGTTATGGATT 21 4126872 0.723513697 4 21 177 1 1.531478917 0.676470588 0.380952381 0.617647059 21 0 0 34 X:4126838-4126884 6 23.5 5050 FBgn0026083 3003.736667 42.11 64.35333333 0.007823589 0.558062218 0.365171449 0 0 0 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC X 4132323 4132329 + X_4132323_4132329_+ 0.552961654 0.547675481 0.550318568 0.003737908 GlcAT-I FBtr0070644 4132268 4132833 X + 4132240 4132359 stop_codon GlcAT-I FlyBase G58771.1 CAGCGATCCGATGGCGGCATGGAGGTCTAACCCGGGACCTAATTGTATATATAGCAAACTATCATCCTAGTGAATTTACTTAATGTGTTCCGTCTCCTCATAGTTTAGCCCCAATTTATT 99 4132327 0.990482047 16 89 903 0.903508772 2.012837225 0.043859649 0.121212121 0.236842105 99 11 0 103 X:4132240-4132359 7 GlcAT-I FBtr0070644 4132268 4132833 TGTGTTC 7mer-m8 dme-miR-317-3p X + 4132283 4132354 3'utr GlcAT-I FlyBase G44458.1 TGTATATATAGCAAACTATCATCCTAGTGAATTTACTTAATGTGTTCCGTCTCCTCATAGTTTAGCCCCAAT 61 4132327 0.989215843 10 56 543 0.927710843 1.886490725 0.024096386 0.278688525 0.469879518 61 6 0 77 X:4132283-4132354 7 66.5 5051 FBgn0066114 187.3333333 14.82333333 22.83333333 0.354982206 4.486170452 2.912408759 -4 -4 -4 0.1 dme-miR-305-3p 6mer2-7 TGTGCC X 4132786 4132791 + X_4132786_4132791_+ 0.999999937 0.999934145 0.999967041 4.65E-05 GlcAT-I FBtr0070644 4132268 4132833 X + 4132747 4132800 3'utr GlcAT-I FlyBase G58774.1 TGGAGATTAGTTACATTAGATATACATAAGCTTCCCCTGTGTGCCTCCCAATTG 16 4132786 0.777590729 6 16 112 1 1.301029996 0.25 0.25 0.4 16 0 0 20 X:4132747-4132800 6 GlcAT-I FBtr0070644 4132268 4132833 TGTGCC 6mer2-7 dme-miR-305-3p X + 4132731 4132808 3'utr GlcAT-I FlyBase G44459.1 AGGTTTTGCAAATTGTTGGAGATTAGTTACATTAGATATACATAAGCTTCCCCTGTGTGCCTCCCAATTGACGCAAAT 16 4132787 0.693920892 8 15 132 0.96 1.380211242 0.12 0.375 0.6 16 1 0 24 X:4132731-4132808 6 11.5 5052 FBgn0066114 187.3333333 14.82333333 22.83333333 0.0613879 0.775803913 0.503649635 0 -1 -0.5 0.1 dme-miR-1012-3p 6mer3-8 TTGACT X 4371034 4371039 + X_4371034_4371039_+ 1 1 1 0 CG3626 FBtr0070652 4370341 4371136 X + 4371017 4371066 3'utr CG3626 FlyBase G58804.1 TTTACTAACCCAGACGATTGACTTTGTAATTTATGGTGTGCTACTGTGTG 23 4371034 0.897441426 4 23 166 1 1.447158031 0.142857143 0.173913043 0.321428571 23 0 0 28 X:4371017-4371066 6 CG3626 FBtr0070652 4370341 4371136 TTGACT 6mer3-8 dme-miR-1012-3p X + 4371017 4371050 3'utr CG3626 FlyBase G44477.1 TTTACTAACCCAGACGATTGACTTTGTAATTTAT 18 4371035 0.751307921 3 17 122 0.95 1.278753601 0.05 0.111111111 0.2 18 1 0 19 X:4371017-4371050 6 20 5053 FBgn0029706 385.3333333 12.31666667 18.87333333 0.051903114 1.623815968 1.05969622 0 -1 -0.5 0.1 dme-miR-184-5p 8mer-A1 TGATAAGA X 4542395 4542402 + X_4542395_4542402_+ 0.601185762 0.600191663 0.600688712 0.000702935 CHOp24 FBtr0070675|FBtr0343566 4542055|4542055 4542438|4542506 X + 4542344 4542419 3'utr CHOp24 FlyBase G58809.1 CAGACACACATTCAAGGGGGGAAGAGACACTTGTGAACTTTCGAACTAAATTGATAAGAACCATTTGTTTTCTAAT 23 4542374 0.911277231 8 20 124 0.857142857 1.079181246 0.214285714 0.217391304 0.357142857 23 3 1 24 X:4542344-4542419 8 CHOp24 FBtr0070675|FBtr0343566 4542055|4542055 4542438|4542506 TGATAAGA 8mer-A1 dme-miR-184-5p X + 4542344 4542432 3'utr CHOp24 FlyBase G44481.1 CAGACACACATTCAAGGGGGGAAGAGACACTTGTGAACTTTCGAACTAAATTGATAAGAACCATTTGTTTTCTAATAAATGTAGGTTGA 19 4542375 0.9679442 8 17 105 0.892857143 0.920818754 0.214285714 0.473684211 0.642857143 19 1 2 25 X:4542344-4542432 8 6 5054 FBgn0029709 630.33 70.76 108.4966667 0.009518823 0.084793669 0.055301238 21 20 20.5 0.1 dme-miR-999-3p 6mer3-8 AGTTAA X 4553219 4553224 - X_4553219_4553224_- 0.98966808 0.999487581 0.994577831 0.006943435 CG11444 FBtr0070698|FBtr0343567 4553115|4553115 4553334|4553334 X - 4553213 4553246 3'utr CG11444 FlyBase G64747.1 CCTTTTGATGAACAGTGCAATTAGTTAAGCATAA 8 4553225 0.719776927 3 8 52 1 0.954242509 0.333333333 0.125 0.222222222 8 0 0 9 X:4553213-4553246 6 CG11444 FBtr0343567|FBtr0070698 4553115|4553115 4553334|4553334 AGTTAA 6mer3-8 dme-miR-999-3p X - 4553213 4553244 3'utr CG11444 FlyBase G48780.1 TTTTGATGAACAGTGCAATTAGTTAAGCATAA 5 4553225 0.727206407 3 5 36 1 0.903089987 0.25 0.4 0.625 5 0 0 8 X:4553213-4553244 6 6.5 5055 FBgn0029715 690.7566667 79.31666667 121.3466667 0.009409971 0.081949989 0.053565542 1 1 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 4638847 4638853 + X_4638847_4638853_+ 0.823349562 0.823338248 0.823343905 8.06E-06 pon FBtr0070681 4638658 4639112 X + 4638831 4638859 3'utr pon FlyBase G58824.1 AAGTTTTTAATTGCACCCAAAGATTGTCA 5 4638842 0.7899537 3 5 27 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 X:4638831-4638859 7 pon FBtr0070681 4638658 4639112 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X + 4638813 4638861 3'utr pon FlyBase G44489.1 ATTTTTCAGCACCTAGTTAAGTTTTTAATTGCACCCAAAGATTGTCACA 8 4638854 0.985595571 4 5 48 0.5 0.84509804 0.357142857 0.25 0.571428571 8 7 0 7 X:4638813-4638861 7 6 5056 FBgn0025739 591.8333333 27.75666667 42.74666667 0.010137989 0.216164285 0.140361822 5 -7 -1 0.1 dme-miR-305-5p 8mer-A1 AGTACAAA X 4680590 4680597 - X_4680590_4680597_- 0.605501782 0.605648569 0.605575176 0.000103803 Pp2C1 FBtr0070685|FBtr0343531 4680402|4679986 4680631|4680631 X - 4680546 4680623 3'utr Pp2C1 FlyBase G64769.1 GTAACGAAACATGCGAGCAACTTGCAAGTACAAATCCTAAGCAACGGAAAATTTTAGATCCTAGTATACTACTTTACT 81 4680601 0.756303164 10 71 386 0.887640449 1.596597096 0.247191011 0.098765432 0.179775281 81 9 1 79 X:4680546-4680623 8 Pp2C1 FBtr0343531 4679986 4680631 AGTACAAA 8mer-A1 dme-miR-305-5p X - 4680539 4680645 stop_codon Pp2C1 FlyBase G48791.1 CGCGAAGGCGCTAGGCTAGATTGTAACGAAACATGCGAGCAACTTGCAAGTACAAATCCTAAGCAACGGAAAATTTTAGATCCTAGTATACTACTTTACTGAAAACG 54 4680601 0.956473552 11 50 241 0.855421687 1.851258349 0.277108434 0.425925926 0.626506024 54 12 0 71 X:4680539-4680645 8 58 5057 FBgn0022768 1391.28 29.69333333 45.54 0.04168823 1.953300404 1.273605621 4 4 4 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA X 4698733 4698738 + X_4698733_4698738_+ 1 1 1 0 ctp FBtr0070707|FBtr0070704|FBtr0070706|FBtr0307065 4698457|4698457|4698457|4698457 4702034|4699456|4699456|4702034 X + 4698695 4698742 3'utr ctp FlyBase G58846.1 ACTACAACCACCAGTAGAACATCTCAAGGATGCGGAAATGATGACCGA 6 4698733 0.914335817 3 6 20 1 0.77815125 0.333333333 0 0 6 0 0 6 X:4698695-4698742 6 ctp FBtr0070706|FBtr0307065|FBtr0070707|FBtr0070704 4698457|4698457|4698457|4698457 4699456|4702034|4702034|4699456 TGATGA 6mer3-8 dme-miR-2a-2-5p X + 4698691 4698742 3'utr ctp FlyBase G44504.1 AAACACTACAACCACCAGTAGAACATCTCAAGGATGCGGAAATGATGACCGA 10 4698725 0.929377927 6 8 31 0.909090909 1 0.272727273 0.1 0.181818182 10 1 0 10 X:4698691-4698742 6 4.5 5058 FBgn0011760 8034.93 648.8766667 999.3333333 0.000560055 0.006935062 0.004503002 0 8 4 0.1 dme-miR-283-5p 7mer-A1 GATATTA X 4705047 4705053 + X_4705047_4705053_+ 0.497324098 0.782735688 0.640029893 0.201816478 l(1)G0334 FBtr0070709|FBtr0070711|FBtr0070708|FBtr0070710 4704769|4704769|4704769|4704769 4705123|4705265|4705123|4705123 X + 4705028 4705110 3'utr l(1)G0334 FlyBase G58859.1 ACTCTGGGGTACTGCATTGGATATTATATTGCGAACGTGTTCAATAAGGATAAAGCGAGGTGTAAATTGTTGAAAATATAAAA 14 4705072 0.981481815 8 10 105 0.75 0.77815125 0.1875 0.142857143 0.25 14 3 1 12 X:4705028-4705110 7 l(1)G0334 FBtr0070710|FBtr0070708|FBtr0070711|FBtr0070709 4704769|4704769|4704769|4704769 4705123|4705123|4705265|4705123 GATATTA 7mer-A1 dme-miR-283-5p X + 4705017 4705075 3'utr l(1)G0334 FlyBase G44516.1 CGCACCACATAACTCTGGGGTACTGCATTGGATATTATATTGCGAACGTGTTCAATAAG 9 4705044 0.978292364 4 8 56 0.9 0.954242509 0.1 0.111111111 0.2 9 1 0 9 X:4705017-4705075 7 6 5059 FBgn0028325 2302.306667 161.7833333 248.5566667 0.002606082 0.037086639 0.024139365 -25 3 -11 0.1 dme-bantam-3p 6mer3-8 TGATCT X 482668 482673 + X_482668_482673_+ 0.999999999 0.999977577 0.999988788 1.58E-05 CG3176 FBtr0336920|FBtr0343501 482436|482580 482768|482768 X + 482623 482697 3'utr CG3176 FlyBase G57740.1 AAAGAATATAGAGCTATATAGTATTTAACATTAGGCAAAAATCTTTGATCTATTCTTCGTTAGCGCTGTGCGAGT 15 482667 0.985099664 9 15 127 1 1.301029996 0.1 0.333333333 0.5 15 0 0 20 X:482623-482697 6 CG3176 FBtr0336920|FBtr0343501 482436|482580 482768|482768 TGATCT 6mer3-8 dme-bantam-3p X + 482655 482706 3'utr CG3176 FlyBase G43687.1 AGGCAAAAATCTTTGATCTATTCTTCGTTAGCGCTGTGCGAGTACTGCCAGA 13 482674 0.804898776 7 11 87 0.909090909 1.301029996 0.318181818 0.538461538 0.727272727 13 2 0 20 X:482655-482706 6 9.5 5060 FBgn0029524 104.6533333 24.39 37.14333333 0.090775895 0.389503895 0.255765952 1 -6 -2.5 0.1 dme-miR-184-5p 6mer2-7 GATAAG X 490591 490596 + X_490591_490596_+ 0.952704602 0.961023188 0.956863895 0.005882138 CG3156 FBtr0070079 490570 490725 X + 490587 490628 3'utr CG3156 FlyBase G57745.1 TTAAGATAAGTTGGACTAAACGGCTTAGAAGTGGCCCCACCG 15 490598 0.957127362 3 14 68 0.944444444 1.230448921 0.5 0.133333333 0.277777778 15 1 0 17 X:490587-490628 6 CG3156 FBtr0070079 490570 490725 GATAAG 6mer2-7 dme-miR-184-5p X + 490589 490614 3'utr CG3156 FlyBase G43689.1 AAGATAAGTTGGACTAAACGGCTTAG 7 490598 0.726130396 2 7 29 1 1.041392685 0.272727273 0.571428571 0.727272727 7 0 0 11 X:490589-490614 6 10.5 5061 FBgn0023536 204 10.62666667 16.39 0.051470588 0.988080301 0.640634533 -7 -7 -7 0.1 dme-miR-317-3p 8mer-A1 TGTGTTCA X 490671 490678 + X_490671_490678_+ 0.631136783 0.631136783 0.631136783 0 CG3156 FBtr0070079 490570 490725 X + 490633 490684 3'utr CG3156 FlyBase G57746.1 TTGGTGGTGGACCAGCTAGTGCTATTGTTACCGGGATATGTGTTCATAAATC 11 490669 0.987272938 5 11 101 1 1.079181246 0.416666667 0.090909091 0.166666667 11 0 0 12 X:490633-490684 8 CG3156 FBtr0070079 490570 490725 TGTGTTCA 8mer-A1 dme-miR-317-3p X + 490618 490682 3'utr CG3156 FlyBase G43690.1 TGGCCCCACCGCTCCTTGGTGGTGGACCAGCTAGTGCTATTGTTACCGGGATATGTGTTCATAAA 14 490670 0.983922151 9 13 103 0.9 1.255272505 0.1 0.285714286 0.5 14 2 0 18 X:490618-490682 8 10.5 5062 FBgn0023536 204 10.62666667 16.39 0.051470588 0.988080301 0.640634533 2 1 1.5 0.1 dme-miR-79-3p 6mer3-8 TAGCTT X 4914175 4914180 + X_4914175_4914180_+ 0.999990995 0.999999373 0.999995184 5.94E-06 CG32772 FBtr0342951|FBtr0343533|FBtr0300997|FBtr0342952 4914143|4914143|4914143|4914143 4914961|4915161|4914961|4915161 X + 4914138 4914256 stop_codon CG32772 FlyBase G58862.1 TAAGTAGGCTAGTTAAGAATGGAAAGAAGGTCTCTTTTAGCTTAAGCCCCGAACGATCAGCTGCTAAAGTCCCTGATTAGCATAGCCATAGCCAAAGTAGCATCACATTCAGCACATAC 64 4914173 0.977306137 8 63 413 0.971830986 1.838849091 0.154929577 0.109375 0.197183099 64 2 0 69 X:4914138-4914256 6 CG32772 FBtr0342952|FBtr0300997|FBtr0343533|FBtr0342951 4914143|4914143|4914143|4914143 4915161|4914961|4915161|4914961 TAGCTT 6mer3-8 dme-miR-79-3p X + 4914143 4914234 stop_codon CG32772 FlyBase G44518.1 AGGCTAGTTAAGAATGGAAAGAAGGTCTCTTTTAGCTTAAGCCCCGAACGATCAGCTGCTAAAGTCCCTGATTAGCATAGCCATAGCCAAAG 51 4914173 0.957867862 12 51 347 1 1.892094603 0.115384615 0.37254902 0.58974359 51 0 0 78 X:4914143-4914234 6 50.5 5063 FBgn0052772 546.74 21.57666667 33.00666667 0.092365658 2.340491271 1.529993941 2 2 2 0.1 dme-miR-14-3p 6mer3-8 AAGACT X 4921697 4921702 - X_4921697_4921702_- 0.999539364 0.999999958 0.999769661 0.000325693 CG44774 FBtr0343142 4921676 4927583 X - 4921685 4921777 3'utr CG44774 FlyBase G64792.1 AAACACAGAACCATACAAATTGTAGCCTTACAAACAGAAACAATTATTTATGTGTTAAGAGAACATGTTTTTGTAAAGACTAAATACAAATGA 29 4921705 0.956249217 11 28 189 0.96969697 1.505149978 0.03030303 0.137931034 0.242424242 29 1 0 32 X:4921685-4921777 6 CG44774 FBtr0343142 4921676 4927583 AAGACT 6mer3-8 dme-miR-14-3p X - 4921686 4921720 3'utr CG44774 FlyBase G48808.1 AGAGAACATGTTTTTGTAAAGACTAAATACAAATG 10 4921706 0.669483184 5 8 69 0.8125 0.812913357 0.375 0.5 0.6875 10 2 1 13 X:4921686-4921720 6 11 5064 FBgn0266000 3691.093333 67.20666667 103.37 0.002980147 0.163674239 0.106413853 3 4 3.5 0.1 dme-miR-8-3p 6mer3-8 CAGTAT X 4927350 4927355 - X_4927350_4927355_- 1 1 1 0 CG44774 FBtr0343138|FBtr0343140|FBtr0343142|FBtr0343141|FBtr0343139|FBtr0343136|FBtr0345209|FBtr0343135|FBtr0343137 4926662|4926662|4921676|4926662|4926662|4926662|4926662|4926662|4926662 4927583|4927583|4927583|4927583|4927583|4927583|4927583|4927583|4927583 X - 4927331 4927423 3'utr CG44774 FlyBase G64808.1 AATATTTAACATTTCAAGGAACACCTTAGCCTAGACGTTACTTTAGCCTAGACTAGAGCACTGAACTACAGTATGGGCGAATGAGTCCACGCA 60 4927357 0.83351416 14 42 276 0.683544304 1.431363764 0.113924051 0.216666667 0.405063291 60 24 1 54 X:4927331-4927423 6 CG44774 FBtr0343139|FBtr0343141|FBtr0343142|FBtr0343138|FBtr0343140|FBtr0343137|FBtr0343135|FBtr0345209|FBtr0343136 4926662|4926662|4921676|4926662|4926662|4926662|4926662|4926662|4926662 4927583|4927583|4927583|4927583|4927583|4927583|4927583|4927583|4927583 CAGTAT 6mer3-8 dme-miR-8-3p X - 4927331 4927522 3'utr CG44774 FlyBase G48826.1 AGTAACCACCCTGTTACGTTTGTTATACACTAAGCTATTTAACGGCGACCGAAAGCCAAGCTCCCTTCCTTAGCCGCAGGTTCCATATCATTCAAGAGTAATATTTAACATTTCAAGGAACACCTTAGCCTAGACGTTACTTTAGCCTAGACTAGAGCACTGAACTACAGTATGGGCGAATGAGTCCACGCA 100 4927357 0.875410259 24 87 483 0.887323944 1.799340549 0.084507042 0.32 0.521126761 100 15 1 126 X:4927331-4927522 6 36.5 5065 FBgn0266000 3691.093333 67.20666667 103.37 0.009888669 0.543100883 0.353100513 2 2 2 0.1 dme-miR-11-3p 8mer-m1 CTGTGATG X 4955091 4955098 + X_4955091_4955098_+ 0.462118569 0.46126878 0.461693674 0.000600899 Ptp4E FBtr0301796|FBtr0343529|FBtr0070724|FBtr0301794|FBtr0343528|FBtr0301793 4954603|4954603|4954603|4954603|4955001|4954603 4955916|4955425|4955916|4955916|4955916|4955916 X + 4955068 4955111 3'utr Ptp4E FlyBase G58878.1 CATATACTATACGTAAAATCTGCCTGTGATGTGCTGGATGTGAT 54 4955088 0.758107803 8 45 393 0.887096774 1.439332694 0.35483871 0.111111111 0.225806452 54 6 1 55 X:4955068-4955111 8 Ptp4E FBtr0301793|FBtr0343528|FBtr0301794|FBtr0070724|FBtr0343529|FBtr0301796 4954603|4955001|4954603|4954603|4954603|4954603 4955916|4955916|4955916|4955916|4955425|4955916 CTGTGATG 8mer-m1 dme-miR-11-3p X + 4955069 4955144 3'utr Ptp4E FlyBase G44535.1 ATATACTATACGTAAAATCTGCCTGTGATGTGCTGGATGTGATTTGTCTACGAAGTGGCACTCGGAGTTGCTGTCA 49 4955087 0.982916455 9 45 374 0.915492958 1.511883361 0.436619718 0.346938776 0.549295775 49 5 1 65 X:4955069-4955144 8 49.5 5066 FBgn0004368 1052.996667 19.90333333 30.39 0.047008696 2.4870206 1.628825271 3 4 3.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 4955401 4955406 + X_4955401_4955406_+ 0.997063725 0.966930095 0.98199691 0.021307673 Ptp4E FBtr0301796|FBtr0343529|FBtr0070724|FBtr0301794|FBtr0343528|FBtr0301793 4954603|4954603|4954603|4954603|4955001|4954603 4955916|4955425|4955916|4955916|4955916|4955916 X + 4955345 4955418 3'utr Ptp4E FlyBase G58879.1 GCTTCAGGTTTAACAATCTGCTACCTATTTTTGTATCTGTACCTACCTGTATCCCTGTACCTACTGTATAACTA 40 4955400 0.984366928 7 40 319 1 1.698970004 0.08 0.225 0.38 40 0 0 50 X:4955345-4955418 6 Ptp4E FBtr0301793|FBtr0343528|FBtr0301794|FBtr0070724|FBtr0343529|FBtr0301796 4954603|4955001|4954603|4954603|4954603|4954603 4955916|4955916|4955916|4955916|4955425|4955916 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X + 4955375 4955413 3'utr Ptp4E FlyBase G44536.1 TTGTATCTGTACCTACCTGTATCCCTGTACCTACTGTAT 22 4955400 0.79657405 3 21 168 0.971428571 1.531478917 0.228571429 0.409090909 0.628571429 22 1 0 34 X:4955375-4955413 6 26.5 5067 FBgn0004368 1052.996667 19.90333333 30.39 0.025166271 1.33143527 0.871997368 1 1 1 0.1 dme-miR-1012-3p 6mer2-7 TGACTA X 4955558 4955563 + X_4955558_4955563_+ 0.98880459 0.999999994 0.994402292 0.007916343 Ptp4E FBtr0301796|FBtr0070724|FBtr0301794|FBtr0343528|FBtr0301793 4954603|4954603|4954603|4955001|4954603 4955916|4955916|4955916|4955916|4955916 X + 4955548 4955597 3'utr Ptp4E FlyBase G58881.1 ATTACCACTATGACTATTACTCTAAACGATTGTGTATTATTTTATTATAT 18 4955576 0.859359106 4 16 172 0.956521739 1.342422681 0 0.166666667 0.347826087 18 1 0 22 X:4955548-4955597 6 Ptp4E FBtr0301793|FBtr0343528|FBtr0301794|FBtr0070724|FBtr0301796 4954603|4955001|4954603|4954603|4954603 4955916|4955916|4955916|4955916|4955916 TGACTA 6mer2-7 dme-miR-1012-3p X + 4955513 4955576 3'utr Ptp4E FlyBase G44537.1 GCGTCGATCGATATTATGACCATACTATGTTTACCATTACCACTATGACTATTACTCTAAACGA 5 4955564 0.968575673 4 4 33 1 0.84509804 0 0.4 0.571428571 5 0 0 7 X:4955513-4955576 6 5.5 5068 FBgn0004368 1052.996667 19.90333333 30.39 0.005223188 0.276335622 0.180980586 -18 -6 -12 0.1 dme-miR-276a-3p 6mer2-7 GTTCCT X 503367 503372 + X_503367_503372_+ 0.99999465 0.999999988 0.999997319 3.82E-06 svr FBtr0070086|FBtr0070085|FBtr0344737|FBtr0340146 502970|502970|502970|502970 504319|504319|504319|504319 X + 503331 503427 5'utr svr FlyBase G57756.1 TTTTTCGCATTTTCATACGCTTATATGCCAGCCTATGTTCCTTCCACGCCATTACTTCAGACGCGCACATATTTAGTGGATGCTTGATTTGTATATA 24 503368 0.963464403 7 21 187 0.888888889 1.380211242 0.148148148 0.125 0.222222222 24 3 0 24 X:503331-503427 6 svr FBtr0070085|FBtr0344737|FBtr0340146|FBtr0070086 502970|502970|502970|502970 504319|504319|504319|504319 GTTCCT 6mer2-7 dme-miR-276a-3p X + 503353 503391 5'utr svr FlyBase G43698.1 ATATGCCAGCCTATGTTCCTTCCACGCCATTACTTCAGA 12 503368 0.975682759 4 12 79 1 1.322219295 0.047619048 0.5 0.714285714 12 0 0 21 X:503353-503391 6 13 5069 FBgn0004648 2059.716667 56.39666667 86.34666667 0.006311548 0.230510077 0.150555899 -1 -1 -1 0.1 dme-miR-252-5p 8mer-m1 GTACTTAG X 503506 503513 + X_503506_503513_+ 0.636689615 0.636715339 0.636702477 1.82E-05 svr FBtr0070086|FBtr0070085|FBtr0344737|FBtr0340146 502970|502970|502970|502970 504319|504319|504319|504319 X + 503489 503549 5'utr svr FlyBase G57757.1 AAGGAAATAAGCGAATTGTACTTAGGCAATATGCAGAAATTGGCCCACTTATGGTCATCGA 12 503505 0.983825368 3 11 59 0.916666667 1.041392685 0 0 0 12 1 0 11 X:503489-503549 8 svr FBtr0070085|FBtr0344737|FBtr0340146|FBtr0070086 502970|502970|502970|502970 504319|504319|504319|504319 GTACTTAG 8mer-m1 dme-miR-252-5p X + 503479 503539 5'utr svr FlyBase G43699.1 GAAATAAATTAAGGAAATAAGCGAATTGTACTTAGGCAATATGCAGAAATTGGCCCACTTA 7 503505 0.95680301 3 6 32 1 0.954242509 0.444444444 0.142857143 0.333333333 7 0 0 9 X:503479-503539 8 6.5 5070 FBgn0004648 2059.716667 56.39666667 86.34666667 0.003155774 0.115255039 0.075277949 1 1 1 0.1 dme-miR-2b-2-5p 6mer3-8 TTGAAG X 5069192 5069197 + X_5069192_5069197_+ 0.847875918 0.993958885 0.920917402 0.10329628 ovo FBtr0070738|FBtr0301914|FBtr0100408|FBtr0070739|FBtr0070740 5069079|5069079|5069079|5069079|5069079 5070772|5070929|5070772|5070929|5070929 X + 5069160 5069211 3'utr ovo FlyBase G58885.1 TCGAATCACTTAAGCAAACCAACATTGTGACTTTGAAGTTTTTTGAAAACTG 110 5069185 0.749810859 6 107 631 0.977272727 1.508529719 0.583333333 0.136363636 0.28030303 110 0 3 129 X:5069160-5069211 6 ovo FBtr0070740|FBtr0100408|FBtr0070739|FBtr0070738|FBtr0301914 5069079|5069079|5069079|5069079|5069079 5070929|5070772|5070929|5070772|5070929 TTGAAG 6mer3-8 dme-miR-2b-2-5p X + 5069167 5069200 3'utr ovo FlyBase G44540.1 ACTTAAGCAAACCAACATTGTGACTTTGAAGTTT 78 5069185 0.735710399 5 75 412 0.96 1.77815125 0.672 0.384615385 0.616 78 4 1 120 X:5069167-5069200 6 93.5 5071 FBgn0003028 7.666666667 0.146666667 0.23 12.19565217 637.5 406.5217391 7 7 7 0.1 dme-miR-304-5p 7mer-A1 GAGATTA X 5069248 5069254 + X_5069248_5069254_+ 0.823349562 0.82334956 0.823349561 0 ovo FBtr0070738|FBtr0301914|FBtr0100408|FBtr0070739|FBtr0070740 5069079|5069079|5069079|5069079|5069079 5070772|5070929|5070772|5070929|5070929 X + 5069226 5069274 3'utr ovo FlyBase G58886.1 TGCGGAGGATACGGAATTATTGGAGATTATGCTTATTATGTATATTTTT 29 5069251 0.989747065 3 29 293 1 1.579783597 0.289473684 0.24137931 0.421052632 29 0 0 38 X:5069226-5069274 7 ovo FBtr0070740|FBtr0100408|FBtr0070739|FBtr0070738|FBtr0301914 5069079|5069079|5069079|5069079|5069079 5070929|5070772|5070929|5070772|5070929 GAGATTA 7mer-A1 dme-miR-304-5p X + 5069236 5069272 3'utr ovo FlyBase G44541.1 ACGGAATTATTGGAGATTATGCTTATTATGTATATTT 18 5069252 0.767705229 4 18 181 1 1.380211242 0 0.277777778 0.458333333 18 0 0 24 X:5069236-5069272 7 23.5 5072 FBgn0003028 7.666666667 0.146666667 0.23 3.065217391 160.2272727 102.173913 -3 -4 -3.5 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG X 5069352 5069357 + X_5069352_5069357_+ 0.999984658 0.999990181 0.99998742 3.89E-06 ovo FBtr0070738|FBtr0301914|FBtr0100408|FBtr0070739|FBtr0070740 5069079|5069079|5069079|5069079|5069079 5070772|5070929|5070772|5070929|5070929 X + 5069317 5069370 3'utr ovo FlyBase G58887.1 AGTACCCACTGTATCATGCTACCCCACTTCACTTTGCTGTGCAAATCTCTCTCA 19 5069350 0.985975946 5 19 160 1 1.342422681 0 0.157894737 0.272727273 19 0 0 22 X:5069317-5069370 6 ovo FBtr0070740|FBtr0100408|FBtr0070739|FBtr0070738|FBtr0301914 5069079|5069079|5069079|5069079|5069079 5070929|5070772|5070929|5070772|5070929 GCTGTG 6mer2-7 dme-miR-1008-3p X + 5069332 5069371 3'utr ovo FlyBase G44542.1 ATGCTACCCCACTTCACTTTGCTGTGCAAATCTCTCTCAC 6 5069350 0.982469194 2 5 57 0.888888889 0.903089987 0 0.333333333 0.555555556 6 1 0 8 X:5069332-5069371 6 11.5 5073 FBgn0003028 7.666666667 0.146666667 0.23 1.5 78.40909091 50 2 2 2 0.1 dme-bantam-3p 6mer3-8 TGATCT X 5069937 5069942 + X_5069937_5069942_+ 0.999999999 0.999999795 0.999999897 1.41E-07 ovo FBtr0070738|FBtr0301914|FBtr0100408|FBtr0070739|FBtr0070740 5069079|5069079|5069079|5069079|5069079 5070772|5070929|5070772|5070929|5070929 X + 5069919 5069958 3'utr ovo FlyBase G58888.1 AATCGAATCGCGAGAATATGATCTACTGAATATATAGTTT 15 5069937 0.705586519 2 14 94 1 1.278753601 0.105263158 0.266666667 0.421052632 15 0 0 19 X:5069919-5069958 6 ovo FBtr0070740|FBtr0100408|FBtr0070739|FBtr0070738|FBtr0301914 5069079|5069079|5069079|5069079|5069079 5070929|5070772|5070929|5070772|5070929 TGATCT 6mer3-8 dme-bantam-3p X + 5069914 5069953 3'utr ovo FlyBase G44543.1 TGGAAAATCGAATCGCGAGAATATGATCTACTGAATATAT 11 5069937 0.958003785 4 11 62 1 1.230448921 0.176470588 0.363636364 0.588235294 11 0 0 17 X:5069914-5069953 6 12.5 5074 FBgn0003028 7.666666667 0.146666667 0.23 1.630434783 85.22727273 54.34782609 0 0 0 0.1 dme-bantam-3p 6mer3-8 TGATCT X 5069998 5070003 + X_5069998_5070003_+ 0.999999998 1 0.999999999 0 ovo FBtr0070738|FBtr0301914|FBtr0100408|FBtr0070739|FBtr0070740 5069079|5069079|5069079|5069079|5069079 5070772|5070929|5070772|5070929|5070929 X + 5069978 5070016 3'utr ovo FlyBase G58889.1 GGCAATACCACCAATTGTACTGATCTTTAATGAACAAAC 7 5070005 0.764810314 5 7 55 1 0.903089987 0 0.142857143 0.25 7 0 0 8 X:5069978-5070016 6 ovo FBtr0070740|FBtr0100408|FBtr0070739|FBtr0070738|FBtr0301914 5069079|5069079|5069079|5069079|5069079 5070929|5070772|5070929|5070772|5070929 TGATCT 6mer3-8 dme-bantam-3p X + 5069977 5070010 3'utr ovo FlyBase G44544.1 AGGCAATACCACCAATTGTACTGATCTTTAATGA 5 5069995 0.980426113 4 5 37 1 0.903089987 0.25 0.4 0.625 5 0 0 8 X:5069977-5070010 6 6 5075 FBgn0003028 7.666666667 0.146666667 0.23 0.782608696 40.90909091 26.08695652 -7 3 -2 0.1 dme-miR-8-3p 8mer-A1 CAGTATTA X 5072734 5072741 - X_5072734_5072741_- 0.513863656 0.459787865 0.48682576 0.038237365 CG32767 FBtr0331758 5071025 5077136 X - 5072729 5072776 3'utr CG32767 FlyBase G64823.1 CGTATTTATACACTATGAATGTCTAGTCGTATTTTCAGTATTATGTAA 21 5072744 0.655660895 8 20 228 0.961538462 1.397940009 0.076923077 0.142857143 0.307692308 21 1 0 25 X:5072729-5072776 8 CG32767 FBtr0331758 5071025 5077136 CAGTATTA 8mer-A1 dme-miR-8-3p X - 5072730 5072771 3'utr CG32767 FlyBase G48842.1 TTATACACTATGAATGTCTAGTCGTATTTTCAGTATTATGTA 12 5072757 0.842752395 4 9 113 0.785714286 0.740362689 0 0.166666667 0.285714286 12 2 1 11 X:5072730-5072771 8 10 5076 FBgn0052767 1383.503333 20.81666667 32.11666667 0.007228027 0.480384307 0.311364816 3 16 9.5 0.1 dme-miR-13b-2-5p 6mer3-8 TTTGAC X 5075251 5075256 - X_5075251_5075256_- 0.999998381 0.999999856 0.999999118 1.06E-06 CG32767 FBtr0331757|FBtr0302118|FBtr0302119|FBtr0300995|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 X - 5075183 5075293 3'utr CG32767 FlyBase G64827.1 TCTTATGTGCAATCTCCCCCCATCACTGAAACTGAACTTTGACCTCTTTCTCACCTTCGCTCGAACACCTTGTGGTTTCCTTAATTAGTTGCTAAGTATCCACGATAAACA 43 5075255 0.950771816 12 40 338 0.943396226 1.698970004 0.264150943 0.23255814 0.377358491 43 3 0 50 X:5075183-5075293 6 CG32767 FBtr0300995|FBtr0302119|FBtr0302118|FBtr0331757|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 TTTGAC 6mer3-8 dme-miR-13b-2-5p X - 5075202 5075304 3'utr CG32767 FlyBase G48846.1 TTTTTAAAAGTTCTTATGTGCAATCTCCCCCCATCACTGAAACTGAACTTTGACCTCTTTCTCACCTTCGCTCGAACACCTTGTGGTTTCCTTAATTAGTTGC 34 5075255 0.90333967 14 30 282 0.849056604 1.653212514 0.264150943 0.441176471 0.641509434 34 8 0 45 X:5075202-5075304 6 19 5077 FBgn0052767 1383.503333 20.81666667 32.11666667 0.013733252 0.912730184 0.59159315 -1 -1 -1 0.1 dme-miR-8-3p 7mer-m8 CAGTATT X 5075372 5075378 - X_5075372_5075378_- 0.498798197 0.654869091 0.576833644 0.110358792 CG32767 FBtr0331757|FBtr0302118|FBtr0302119|FBtr0300995|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 X - 5075359 5075403 3'utr CG32767 FlyBase G64828.2 ACTTTGTTTTCAATTACCTAAACCGCAGTATTTGTTTCATATAAT 41 5075371 0.644971286 9 35 405 0.866666667 1.113943352 0.066666667 0.097560976 0.177777778 41 4 2 39 X:5075359-5075403 7 CG32767 FBtr0300995|FBtr0302119|FBtr0302118|FBtr0331757|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 CAGTATT 7mer-m8 dme-miR-8-3p X - 5075360 5075403 3'utr CG32767 FlyBase G48847.1 ACTTTGTTTTCAATTACCTAAACCGCAGTATTTGTTTCATATAA 30 5075371 0.637515737 8 26 304 0.888888889 1.505149978 0.055555556 0.2 0.333333333 30 4 0 32 X:5075360-5075403 7 35.5 5078 FBgn0052767 1383.503333 20.81666667 32.11666667 0.025659497 1.705364291 1.105345096 -7 -7 -7 0.1 dme-bantam-3p 7mer-m8 TGATCTC X 5075689 5075695 - X_5075689_5075695_- 0.659722271 0.65813313 0.6589277 0.001123734 CG32767 FBtr0331757|FBtr0302118|FBtr0302119|FBtr0300995|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 X - 5075544 5075720 3'utr CG32767 FlyBase G64829.1 AATTTTAGTTGTATAGTTTTGCATTTGATCTCTCGGCTTTAGTTTTTGCATTCAAAGCGAAAGAAAATTCAGTTCCTGTGTAATTGCAAAGATAACTTGAGAAATTGTATTATAATTTAATGGACTAGGCAATCAATGTGCTGCTTTCATGCGGAAAGATATGCATATATGTATGAA 302 5075696 0.987367697 35 289 3392 0.959128065 1.944482672 0.108991826 0.185430464 0.329700272 302 12 3 352 X:5075544-5075720 7 CG32767 FBtr0300995|FBtr0302119|FBtr0302118|FBtr0331757|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 TGATCTC 7mer-m8 dme-bantam-3p X - 5075671 5075720 3'utr CG32767 FlyBase G48849.1 AATTTTAGTTGTATAGTTTTGCATTTGATCTCTCGGCTTTAGTTTTTGCA 181 5075696 0.708418765 13 173 2079 0.96 2.421603927 0.101818182 0.397790055 0.603636364 181 11 0 264 X:5075671-5075720 7 219.5 5079 FBgn0052767 1383.503333 20.81666667 32.11666667 0.158655201 10.54443555 6.834457706 1 1 1 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA X 5075844 5075849 - X_5075844_5075849_- 1 0.999999995 0.999999997 0 CG32767 FBtr0331757|FBtr0302118|FBtr0302119|FBtr0300995|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 X - 5075834 5075897 3'utr CG32767 FlyBase G64831.1 TAGTGTAAAAAAAAAAATGAAGAAAATCTCAAATGAACTTGTAACTTGATGTGAAACACGAATT 15 5075851 0.970654228 6 14 82 1 1.255272505 0.166666667 0.2 0.333333333 15 0 0 18 X:5075834-5075897 6 CG32767 FBtr0300995|FBtr0302119|FBtr0302118|FBtr0331757|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 ATGTGA 6mer3-8 dme-miR-1003-3p X - 5075830 5075865 3'utr CG32767 FlyBase G48851.1 ATGAACTTGTAACTTGATGTGAAACACGAATTGTTT 9 5075849 0.991305702 5 6 57 0.727272727 0.602059991 0.090909091 0.222222222 0.363636364 9 2 1 8 X:5075830-5075865 6 8 5080 FBgn0052767 1383.503333 20.81666667 32.11666667 0.005782422 0.384307446 0.249091853 2 0 1 0.1 dme-bantam-3p 6mer3-8 TGATCT X 5075934 5075939 - X_5075934_5075939_- 1 1 1 0 CG32767 FBtr0331757|FBtr0302118|FBtr0302119|FBtr0300995|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 X - 5075922 5075978 3'utr CG32767 FlyBase G64832.1 TGCTCTCGTGCCCTCTCTGTCACTGTCCCCATCTCACTCTGATCTGTTTATAAGAAG 42 5075940 0.789367719 10 39 418 0.931818182 1.311753861 0.181818182 0.047619048 0.090909091 42 2 1 41 X:5075922-5075978 6 CG32767 FBtr0300995|FBtr0302119|FBtr0302118|FBtr0331757|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 TGATCT 6mer3-8 dme-bantam-3p X - 5075925 5075956 3'utr CG32767 FlyBase G48852.1 CTGTCCCCATCTCACTCTGATCTGTTTATAAG 12 5075939 0.763357932 4 12 116 1 1.204119983 0 0.25 0.4375 12 0 0 16 X:5075925-5075956 6 24 5081 FBgn0052767 1383.503333 20.81666667 32.11666667 0.017347266 1.152922338 0.747275558 1 0 0.5 0.1 dme-miR-184-5p 6mer3-8 TGATAA X 513577 513582 - X_513577_513582_- 0.998313837 0.992754776 0.995534307 0.003930807 elav FBtr0307173 509233 517791 X - 513524 513587 3'utr elav FlyBase G63819.1 GCTTATGATAAATGAATCTCATAGTTTAGTTTAGCGGAGGAAGTACGGCCACCTCTCCCTTAAT 35 513575 0.992163917 10 28 314 0.794871795 1.190331698 0.307692308 0.114285714 0.205128205 35 7 1 31 X:513524-513587 6 elav FBtr0307173 509233 517791 TGATAA 6mer3-8 dme-miR-184-5p X - 513544 513594 3'utr elav FlyBase G48107.1 GTTTAGCGCTTATGATAAATGAATCTCATAGTTTAGTTTAGCGGAGGAAGT 47 513575 0.915588065 6 35 427 0.77027027 1.45484486 0.22972973 0.404255319 0.621621622 47 16 1 57 X:513544-513594 6 25.5 5082 FBgn0260400 1799.413333 52.41 80.75 0.014171285 0.486548369 0.315789474 -7 -7 -7 0.1 dme-bantam-3p 8mer-A1 TGATCTCA X 513791 513798 - X_513791_513798_- 0.631134817 0.631135873 0.631135345 7.78E-07 elav FBtr0307173 509233 517791 X - 513711 513820 3'utr elav FlyBase G63820.1 AAGAGGTGCCATCGGAATCCGTTGATCTCAGCTAAAAAGACATCCCCAGACATTCCCAGTCGTGTTTGGTTTAGTCCTCGTAACTCCACGATTTAAGGGGGTATCCCCCG 76 513799 0.967675496 10 76 417 1 1.995635195 0.191919192 0.263157895 0.434343434 76 0 0 99 X:513711-513820 8 elav FBtr0307173 509233 517791 TGATCTCA 8mer-A1 dme-bantam-3p X - 513761 513820 3'utr elav FlyBase G48109.1 AAGAGGTGCCATCGGAATCCGTTGATCTCAGCTAAAAAGACATCCCCAGACATTCCCAGT 47 513799 0.970093052 7 45 255 0.966666667 1.763427994 0.266666667 0.234042553 0.4 47 2 0 58 X:513761-513820 8 59 5083 FBgn0260400 1799.413333 52.41 80.75 0.032788464 1.125739363 0.730650155 1 1 1 0.1 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 513834 513841 - X_513834_513841_- 0.631136558 0.631136331 0.631136444 2.12E-07 elav FBtr0307173 509233 517791 X - 513821 513878 3'utr elav FlyBase G63821.1 TCCTCTGACAGTCACATGAAGAAGATGAAGGAATCGATCTAGTCAAGGCCCATCTAAC 44 513841 0.702031632 6 36 174 0.823529412 0.924279286 0.352941176 0.159090909 0.274509804 44 5 4 42 X:513821-513878 8 elav FBtr0307173 509233 517791 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X - 513821 513859 3'utr elav FlyBase G48110.1 AGAAGATGAAGGAATCGATCTAGTCAAGGCCCATCTAAC 24 513841 0.662849714 4 22 89 0.918918919 1.054357662 0.27027027 0.375 0.594594595 24 1 2 34 X:513821-513859 8 31.5 5084 FBgn0260400 1799.413333 52.41 80.75 0.017505706 0.601030338 0.390092879 0 0 0 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 514231 514236 - X_514231_514236_- 1 1 1 0 elav FBtr0307173|FBtr0307173|FBtr0307173 509233|509233|509233 517791|517791|517791 X - 514210 514247 3'utr elav FlyBase G63822.1 ACTGCAAACTCCTGTGAATTCTATCGAATGAATATTTA 17 514229 0.629703102 5 16 112 0.958333333 1.361727836 0.041666667 0.294117647 0.5 17 1 0 23 X:514210-514247 6 elav FBtr0307173|FBtr0307173|FBtr0307173 509233|509233|509233 517791|517791|517791 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X - 514211 514288 3'utr elav FlyBase G48111.1 TTTAGTTGATATTCTAGCTATATACGATCTGTGCGTATGTTACTGCAAACTCCTGTGAATTCTATCGAATGAATATTT 13 514238 0.982575278 6 12 97 0.894736842 0.753327667 0.263157895 0.384615385 0.578947368 13 0 2 17 X:514211-514288 6 13.5 5085 FBgn0260400 1799.413333 52.41 80.75 0.007502445 0.25758443 0.167182663 -7 2 -2.5 0.1 dme-miR-970-3p 8mer-A1 TCTTATGA X 514965 514972 - X_514965_514972_- 0.402915138 0.436559908 0.419737523 0.023790466 elav FBtr0307173 509233 517791 X - 514932 515082 3'utr elav FlyBase G63825.1 ATTGTGCAATAGTTTTAAAATGCAACTGAAGGCAAAACACAACAACAAATTTTCAAGTATCTCAAATTATAATTTCATTAGGCGAGGAAAACGAGAAATGAAATATTTGATCTTATGAAACATAATTGTATGATTACTCTATACACACCGC 48 514975 0.929408603 18 43 357 0.909090909 1.22184875 0.2 0.145833333 0.254545455 48 3 2 50 X:514932-515082 8 elav FBtr0307173 509233 517791 TCTTATGA 8mer-A1 dme-miR-970-3p X - 514936 514985 3'utr elav FlyBase G48113.1 ATGAAATATTTGATCTTATGAAACATAATTGTATGATTACTCTATACACA 13 514975 0.987028335 6 9 104 0.705882353 1.079181246 0.235294118 0.307692308 0.470588235 13 5 0 12 X:514936-514985 8 18 5086 FBgn0260400 1799.413333 52.41 80.75 0.01000326 0.343445907 0.222910217 3 3 3 0.1 dme-miR-33-5p 7mer-A1 AATGCAA X 515058 515064 - X_515058_515064_- 0.658756317 0.78285243 0.720804374 0.087749194 elav FBtr0307173 509233 517791 X - 514932 515082 3'utr elav FlyBase G63825.1 ATTGTGCAATAGTTTTAAAATGCAACTGAAGGCAAAACACAACAACAAATTTTCAAGTATCTCAAATTATAATTTCATTAGGCGAGGAAAACGAGAAATGAAATATTTGATCTTATGAAACATAATTGTATGATTACTCTATACACACCGC 48 515057 0.929408603 18 43 357 0.909090909 1.22184875 0.2 0.145833333 0.254545455 48 3 2 50 X:514932-515082 7 elav FBtr0307173 509233 517791 AATGCAA 7mer-A1 dme-miR-33-5p X - 514991 515121 3'utr elav FlyBase G48114.1 TTGTCACCGATGATCAAATTAATTGTATTAATTATAATTATTGTGCAATAGTTTTAAAATGCAACTGAAGGCAAAACACAACAACAAATTTTCAAGTATCTCAAATTATAATTTCATTAGGCGAGGAAAAC 19 515056 0.999365495 12 19 123 1 1.491361694 0.032258065 0.368421053 0.612903226 19 0 0 31 X:514991-515121 7 8 5087 FBgn0260400 1799.413333 52.41 80.75 0.004445893 0.152642625 0.099071207 -7 -8 -7.5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 515404 515410 - X_515404_515410_- 0.823348118 0.823346598 0.823347358 1.06E-06 elav FBtr0307173 509233 517791 X - 515397 515433 3'utr elav FlyBase G63829.1 AGAAGCCGCCTGCTCTTCCCTTTCCAAAGATTTACCC 23 515412 0.78318523 3 23 194 1 1.397940009 0.12 0.086956522 0.16 23 0 0 25 X:515397-515433 7 elav FBtr0307173 509233 517791 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X - 515397 515489 3'utr elav FlyBase G48116.1 TCAAAACCAAAAGAACTATGGCAATTTCTAGCTAATAAAATGATTGAATGATTGATAGAAGCCGCCTGCTCTTCCCTTTCCAAAGATTTACCC 20 515412 0.980244575 7 20 145 1 1.491361694 0.064516129 0.4 0.612903226 20 0 0 31 X:515397-515489 7 17 5088 FBgn0260400 1799.413333 52.41 80.75 0.009447524 0.324365579 0.210526316 2 2 2 0.1 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 515551 515558 - X_515551_515558_- 0.63113273 0.631132996 0.631132863 2.12E-07 elav FBtr0307173 509233 517791 X - 515489 515576 3'utr elav FlyBase G63830.1 AAAATTCGCAACAAGAACTCTAGTCAGAAGATGGAAAACAAGAATATTATTATGATGAGGCAGCCGCATATAAGGAGGAATAGTAGAT 76 515558 0.903199156 10 70 284 0.947916667 1.481920138 0.09375 0.223684211 0.385416667 76 3 2 91 X:515489-515576 8 elav FBtr0307173 509233 517791 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X - 515540 515580 3'utr elav FlyBase G48117.2 GAACAAAATTCGCAACAAGAACTCTAGTCAGAAGATGGAAA 43 515558 0.84046978 4 33 131 0.845070423 1.176091259 0.169014085 0.348837209 0.605633803 43 8 3 60 X:515540-515580 8 48 5089 FBgn0260400 1799.413333 52.41 80.75 0.026675361 0.915855753 0.594427245 0 0 0 0.1 dme-miR-282-5p 6mer2-7 GAGGCT X 516919 516924 - X_516919_516924_- 0.999985571 0.99998317 0.999984371 1.70E-06 elav FBtr0100254|FBtr0307173 516848|509233 517791|517791 X - 516891 516955 3'utr elav FlyBase G63833.1 GCGCATATAATAGGTATATATGCATAACATGGAGGCTGCTACAGTATTACAAGAAACATAAAAAT 390 516926 0.929410632 6 387 2004 0.993670886 2.371990911 0.276371308 0.171794872 0.318565401 390 2 1 471 X:516891-516955 6 elav FBtr0100254|FBtr0307173 516848|509233 517791|517791 GAGGCT 6mer2-7 dme-miR-282-5p X - 516874 516948 3'utr elav FlyBase G48118.1 TAATAGGTATATATGCATAACATGGAGGCTGCTACAGTATTACAAGAAACATAAAAATTAAAACTATATACTTAA 277 516926 0.959733538 5 272 1329 0.979498861 2.33243846 0.277904328 0.375451264 0.605922551 277 8 1 430 X:516874-516948 6 332.5 5090 FBgn0260400 1799.413333 52.41 80.75 0.184782448 6.34420912 4.117647059 2 2 2 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT X 517345 517351 - X_517345_517351_- 0.638781509 0.652266358 0.645523934 0.009535264 elav FBtr0114366|FBtr0070091|FBtr0100254|FBtr0307173 517234|517234|516848|509233 517791|517791|517791|517791 X - 517334 517368 3'utr elav FlyBase G63835.1 AAACACACTGTGGCAGTGGCAGCTGTGAAAGGTCA 24 517352 0.886232298 4 23 100 0.9375 1 0.09375 0.25 0.4375 24 0 2 30 X:517334-517368 7 elav FBtr0114366|FBtr0070091|FBtr0100254|FBtr0307173 517234|517234|516848|509233 517791|517791|517791|517791 GGCAGCT 7mer-m8 dme-miR-980-3p X - 517294 517367 3'utr elav FlyBase G48119.1 AACACACTGTGGCAGTGGCAGCTGTGAAAGGTCAAAGGTTGGCACAGTCGATCTAGTCACAAAGCAAAACAAAG 18 517352 0.956633838 6 17 80 0.857142857 1.380211242 0.392857143 0.333333333 0.571428571 18 4 0 24 X:517294-517367 7 17 5091 FBgn0260400 1799.413333 52.41 80.75 0.009447524 0.324365579 0.210526316 1 1 1 0.1 dme-miR-305-5p 7mer-A1 GTACAAA X 5319001 5319007 - X_5319001_5319007_- 0.782878936 0.782870488 0.782874712 5.94E-06 Rnp4F FBtr0070753|FBtr0112876|FBtr0340477|FBtr0070752 5318926|5318926|5318926|5318926 5319135|5319135|5319135|5319135 X - 5318994 5319037 3'utr Rnp4F FlyBase G64855.1 CAACCTAAACAGACAAGGTTGGAGAACACTGTACAAAGAGAAAA 20 5319008 0.889598479 3 19 55 0.952380952 1 0.285714286 0.05 0.095238095 20 0 1 20 X:5318994-5319037 7 Rnp4F FBtr0070752|FBtr0340477|FBtr0112876|FBtr0070753 5318926|5318926|5318926|5318926 5319135|5319135|5319135|5319135 GTACAAA 7mer-A1 dme-miR-305-5p X - 5318986 5319111 3'utr Rnp4F FlyBase G48868.1 CGGTGCCAGCGGCCATGGTTTAGTTTGTAAGACGAAGACGAAGATTTGGAGCATATATTTTTTTAGATTTAAGGCAACCTAAACAGACAAGGTTGGAGAACACTGTACAAAGAGAAAAACTGTTGT 20 5319008 0.949601018 7 17 86 0.833333333 1.096910013 0.033333333 0.4 0.6 20 4 1 25 X:5318986-5319111 7 15 5092 FBgn0014024 860.4066667 33.54333333 51.90333333 0.017433617 0.447182749 0.28899878 1 1 1 0.1 dme-miR-308-3p 7mer-m1 TGTGATT X 5327209 5327215 - X_5327209_5327215_- 0.465881324 0.484571018 0.475226171 0.013215614 CG3309 FBtr0344827|FBtr0070798 5326673|5326673 5327305|5327305 X - 5327190 5327239 3'utr CG3309 FlyBase G64868.1 CTGTCTGCTAGTATCCTGTGATTGTGTGATTGTGCCTGGCGGTGCTCTTT 51 5327209 0.639092411 13 51 475 1 1.785329835 0.229508197 0.196078431 0.327868852 51 0 0 61 X:5327190-5327239 7 CG3309 FBtr0344827|FBtr0070798 5326673|5326673 5327305|5327305 TGTGATT 7mer-m1 dme-miR-308-3p X - 5327160 5327239 3'utr CG3309 FlyBase G48878.1 CTGTCTGCTAGTATCCTGTGATTGTGTGATTGTGCCTGGCGGTGCTCTTTATCAGTGTAAATAGATTTTAATCGGCGATT 47 5327209 0.990501456 13 43 443 0.914285714 1.10720997 0.285714286 0.382978723 0.585714286 47 2 4 64 X:5327160-5327239 7 47 5093 FBgn0029756 52.66666667 2.41 3.66 0.892405063 19.50207469 12.84153005 -6 -6 -6 0.1 dme-miR-184-5p 6mer3-8 TGATAA X 5412697 5412702 - X_5412697_5412702_- 0.944283144 0.702511243 0.823397194 0.17095855 spoon FBtr0070795 5412384 5414972 X - 5412528 5412738 3'utr spoon FlyBase G64872.1 TCGAATTCATTGTAGATTTGTCACTTGTACAATTGTTGATAAACTGATTAACTGATAACTGATTAACTGACATAGAGATAATGCAAACACGACAGACATGATGTAGAGCACATATTGAAACTAATCTTAGTCGATAGCGAGAAGAGAAGAAGAGACGTGAAGTGAAGAGTCCTCCCTCAAAGATCATCGTAAGTGTGTGGTACTTCTATTT 70 5412705 0.942223787 24 62 473 0.894117647 1.579783597 0.2 0.171428571 0.317647059 70 8 1 76 X:5412528-5412738 6 spoon FBtr0070795 5412384 5414972 TGATAA 6mer3-8 dme-miR-184-5p X - 5412605 5412730 3'utr spoon FlyBase G48882.1 ATTGTAGATTTGTCACTTGTACAATTGTTGATAAACTGATTAACTGATAACTGATTAACTGACATAGAGATAATGCAAACACGACAGACATGATGTAGAGCACATATTGAAACTAATCTTAGTCGA 36 5412705 0.984619078 20 35 280 0.927272727 1.707570176 0.181818182 0.388888889 0.6 36 4 0 51 X:5412605-5412730 6 19.5 5094 FBgn0263987 8368.983333 240.6166667 372.13 0.002330032 0.081041768 0.052401043 3 3 3 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA X 5412925 5412930 - X_5412925_5412930_- 0.999990943 0.999989267 0.999990105 1.13E-06 spoon FBtr0070795 5412384 5414972 X - 5412823 5412979 3'utr spoon FlyBase G64873.1 TATCCTAAACTAAAACAACTTTTGGAGGGGCTGCCCTCCACACACTGTAGTGCAAATTCGTTTAATGGTTCCTCGTTTTAATAATGTCGTTTAATGCCTTTGGAAATTCGAACTACATTTTAGTCTATGGAACACTAAATACATATTATTGGTTACT 60 5412932 0.983998334 23 59 464 1 1.857332496 0.208333333 0.166666667 0.305555556 60 0 0 72 X:5412823-5412979 6 spoon FBtr0070795 5412384 5414972 GTGCAA 6mer3-8 dme-miR-92b-3p X - 5412901 5412965 3'utr spoon FlyBase G48884.1 ACAACTTTTGGAGGGGCTGCCCTCCACACACTGTAGTGCAAATTCGTTTAATGGTTCCTCGTTTT 14 5412933 0.843143946 5 13 97 0.916666667 1.342422681 0.125 0.428571429 0.666666667 14 2 0 22 X:5412901-5412965 6 20.5 5095 FBgn0263987 8368.983333 240.6166667 372.13 0.002449521 0.085197756 0.055088276 2 3 2.5 0.1 dme-miR-304-5p 6mer3-8 TGAGAT X 5414157 5414162 - X_5414157_5414162_- 0.998654898 0.995794983 0.99722494 0.002022255 spoon FBtr0070794|FBtr0070795|FBtr0308689|FBtr0308688 5413825|5412384|5413825|5413825 5414972|5414972|5414972|5414972 X - 5414090 5414231 3'utr spoon FlyBase G64879.1 GAAACATAGAAACTCTGGATAAGAATGGAGAAAAACCTGACAAAACTTTAGTTTTATGCTGCTATTTGCTGAGATCTGTAAATATTATATTAGGCCTTTTTAAACAACTGATAATATCTAATCGACGAGTTCATACATTTAC 127 5414165 0.932894368 14 122 1236 0.96 1.681241237 0.3 0.157480315 0.286666667 127 4 2 144 X:5414090-5414231 6 spoon FBtr0308688|FBtr0308689|FBtr0070795|FBtr0070794 5413825|5413825|5412384|5413825 5414972|5414972|5414972|5414972 TGAGAT 6mer3-8 dme-miR-304-5p X - 5414086 5414198 3'utr spoon FlyBase G48887.1 AACCTGACAAAACTTTAGTTTTATGCTGCTATTTGCTGAGATCTGTAAATATTATATTAGGCCTTTTTAAACAACTGATAATATCTAATCGACGAGTTCATACATTTACATGC 105 5414165 0.99071426 13 98 1007 0.935294118 1.298307137 0.376470588 0.438095238 0.652941176 105 4 7 159 X:5414086-5414198 6 103 5096 FBgn0263987 8368.983333 240.6166667 372.13 0.012307349 0.428066773 0.276784994 3 3 3 0.1 dme-miR-999-3p 6mer3-8 AGTTAA X 5426559 5426564 + X_5426559_5426564_+ 0.9999958 0.999985247 0.999990523 7.50E-06 CG4165 FBtr0070775|FBtr0340461|FBtr0070773|FBtr0340462|FBtr0070772 5426346|5426346|5426346|5426346|5426346 5426906|5426906|5426906|5427219|5426906 X + 5426542 5426615 3'utr CG4165 FlyBase G58932.1 TGGAACAAGCTTTAGTTAGTTAAATGATGCAAAGGAGTAGACACACGCACTCATGTTAAATTGTAGTTCTCAGG 15 5426566 0.986378326 10 11 92 0.722222222 0.812913357 0.333333333 0.133333333 0.277777778 15 4 1 13 X:5426542-5426615 6 CG4165 FBtr0340462|FBtr0070772|FBtr0340461|FBtr0070773|FBtr0070775 5426346|5426346|5426346|5426346|5426346 5427219|5426906|5426906|5426906|5426906 AGTTAA 6mer3-8 dme-miR-999-3p X + 5426536 5426584 3'utr CG4165 FlyBase G44572.1 TTTTTTTGGAACAAGCTTTAGTTAGTTAAATGATGCAAAGGAGTAGACA 6 5426561 0.977929237 6 6 42 1 1 0.1 0.5 0.7 6 0 0 10 X:5426536-5426584 6 7.5 5097 FBgn0029763 634.33 17.08666667 26.07333333 0.011823499 0.438938744 0.287650217 -7 -2 -4.5 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC X 5427079 5427085 + X_5427079_5427085_+ 0.656078353 0.658406644 0.657242499 0.001646286 CG4165 FBtr0340462 5426346 5427219 X + 5426979 5427140 3'utr CG4165 FlyBase G58935.1 ACACCTTAATTATATATAATATATATACACTATATTACGGGCCCATATACACATACCGCCCACGTAGATATGTATTTACAAGTTCAGCCGAAGGAGTAAATGTGTTCTTGGACCTACGTAGCGAAAGAATTGGCAACAGGAGAGATTTATACAATAGCGAAG 43 5427086 0.931638187 14 38 242 0.925925926 1.698970004 0.222222222 0.139534884 0.314814815 43 4 0 50 X:5426979-5427140 7 CG4165 FBtr0340462 5426346 5427219 TGTGTTC 7mer-m8 dme-miR-317-3p X + 5427015 5427138 3'utr CG4165 FlyBase G44575.1 ACGGGCCCATATACACATACCGCCCACGTAGATATGTATTTACAAGTTCAGCCGAAGGAGTAAATGTGTTCTTGGACCTACGTAGCGAAAGAATTGGCAACAGGAGAGATTTATACAATAGCGA 24 5427086 0.954461988 11 23 117 0.971428571 1.531478917 0.314285714 0.333333333 0.542857143 24 1 0 34 X:5427015-5427138 7 16.5 5098 FBgn0029763 634.33 17.08666667 26.07333333 0.026011697 0.965665236 0.632830478 -7 -7 -7 0.1 dme-miR-277-3p 7mer-A1 GCATTTA X 5518321 5518327 + X_5518321_5518327_+ 0.821718949 0.822251734 0.821985342 0.000376746 CG12730 FBtr0345785|FBtr0070780 5518138|5518138 5518771|5518771 X + 5518234 5518435 3'utr CG12730 FlyBase G58945.1 GCGAACGAGTATCTGTGTGAGTGCCAGTGCGTGCGCGTGTGTGTGAGTTTGTTTTGAGAGAGCGAGTATCGCTTGCGTTTGCTTGAAGCATTTAAGTCTGAAGTTTGAAATTGTGGCAAGCTTTTGTCGCGGGAACAGTTACCGTATGTGTTATCTAATAGTCGCTAGATATAGGTCAAGAAGTGAAGAAGATAAAGCCAGT 170 5518325 0.987591101 33 157 1397 0.928229665 1.685741739 0.248803828 0.176470588 0.330143541 170 12 3 194 X:5518234-5518435 7 CG12730 FBtr0070780|FBtr0345785 5518138|5518138 5518771|5518771 GCATTTA 7mer-A1 dme-miR-277-3p X + 5518263 5518411 3'utr CG12730 FlyBase G44588.1 CGTGCGCGTGTGTGTGAGTTTGTTTTGAGAGAGCGAGTATCGCTTGCGTTTGCTTGAAGCATTTAAGTCTGAAGTTTGAAATTGTGGCAAGCTTTTGTCGCGGGAACAGTTACCGTATGTGTTATCTAATAGTCGCTAGATATAGGTCA 133 5518325 0.74017343 23 119 1063 0.893401015 1.546542663 0.253807107 0.409090909 0.604060914 132 17 4 176 X:5518263-5518411 7 114 5099 FBgn0029771 260.35 25.59333333 39.07333333 0.437872095 4.45428497 2.917590855 -4 -4 -4 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 5518507 5518513 + X_5518507_5518513_+ 0.823308044 0.823304099 0.823306071 2.76E-06 CG12730 FBtr0345785|FBtr0070780 5518138|5518138 5518771|5518771 X + 5518452 5518528 3'utr CG12730 FlyBase G58946.1 GTAGATATAATAGCGAACAGAAAGCGAGAGAAAACCACTAACAAGAGAGCAAATTCCAAAGAGATAAGTTGTATTGT 165 5518505 0.899243026 5 162 360 0.976415094 1.713910354 0.028301887 0.2 0.377358491 165 2 3 207 X:5518452-5518528 7 CG12730 FBtr0070780|FBtr0345785 5518138|5518138 5518771|5518771 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X + 5518485 5518523 3'utr CG12730 FlyBase G44589.1 ACCACTAACAAGAGAGCAAATTCCAAAGAGATAAGTTGT 115 5518505 0.807079408 2 114 230 0.994505495 1.956648579 0.038461538 0.330434783 0.576923077 115 0 1 181 X:5518485-5518523 7 138.5 5100 FBgn0029771 260.35 25.59333333 39.07333333 0.531976186 5.411565512 3.54461696 2 2 2 0.1 dme-miR-932-5p 6mer2-7 GAATTG X 5518706 5518711 + X_5518706_5518711_+ 0.999999731 0.999501097 0.999750414 0.000352563 CG12730 FBtr0345785|FBtr0070780 5518138|5518138 5518771|5518771 X + 5518667 5518756 3'utr CG12730 FlyBase G58947.1 AAGTAGTTAGTTTTTAGCACAATGCTTTTCATGACCACTGAATTGTTGTATTTATAAACAAATAAATCGTTTGCAATGGAAGAATAAAAC 27 5518710 0.987915578 13 26 228 0.967741935 1.477121255 0 0.148148148 0.258064516 27 1 0 30 X:5518667-5518756 6 CG12730 FBtr0070780|FBtr0345785 5518138|5518138 5518771|5518771 GAATTG 6mer2-7 dme-miR-932-5p X + 5518624 5518731 3'utr CG12730 FlyBase G44591.1 ATTAAGTACATAGTATTTGTGTGTCTCAAGTGAATATACATTGAAGTAGTTAGTTTTTAGCACAATGCTTTTCATGACCACTGAATTGTTGTATTTATAAACAAATAA 16 5518710 0.989759221 11 15 142 1 1.380211242 0.041666667 0.375 0.583333333 16 0 0 24 X:5518624-5518731 6 15 5101 FBgn0029771 260.35 25.59333333 39.07333333 0.057614749 0.586090128 0.383893534 -4 -4 -4 0.1 dme-miR-14-3p 6mer3-8 AAGACT X 5616909 5616914 - X_5616909_5616914_- 0.809957423 0.997339165 0.903648294 0.132498941 RhoGAP5A FBtr0070784 5616570 5617024 X - 5616848 5616926 stop_codon RhoGAP5A FlyBase G64900.1 ATCACCCACTGCAAGACTATATTCGCCACATCCTGAGGACGAGGTCATCATACCATGCTGCCCATACCAAGCCAATAAC 15 5616906 0.967702859 4 13 74 0.882352941 1.176091259 0.058823529 0.133333333 0.235294118 15 2 0 15 X:5616848-5616926 6 RhoGAP5A FBtr0070784 5616570 5617024 AAGACT 6mer3-8 dme-miR-14-3p X - 5616849 5616926 stop_codon RhoGAP5A FlyBase G48906.1 ATCACCCACTGCAAGACTATATTCGCCACATCCTGAGGACGAGGTCATCATACCATGCTGCCCATACCAAGCCAATAA 9 5616906 0.94097516 7 9 37 1 1.041392685 0.090909091 0.111111111 0.272727273 9 0 0 11 X:5616849-5616926 6 7 5102 FBgn0029778 273.03 17.13333333 26.07333333 0.025638208 0.408560311 0.268473536 -8 -8 -8 0.1 dme-bantam-3p 7mer-m8 TGATCTC X 5685736 5685742 - X_5685736_5685742_- 0.661615129 0.661615243 0.661615186 7.07E-08 CG3160 FBtr0070847 5685251 5685911 X - 5685665 5685776 3'utr CG3160 FlyBase G64925.1 CAGCGGGAAGTCCAAACTGAGCTCGGCTGGGCGTTGATCTCGATTTGCCCCGATCGCACGTTATATGTATTAATTGTTTTTACGCCTGCTGTCTGCTGCATTCGATTGGCGA 85 5685743 0.981849597 12 84 624 0.989473684 1.973127854 0.347368421 0.082352941 0.178947368 85 1 0 94 X:5685665-5685776 7 CG3160 FBtr0070847 5685251 5685911 TGATCTC 7mer-m8 dme-bantam-3p X - 5685700 5685761 3'utr CG3160 FlyBase G48928.1 ACTGAGCTCGGCTGGGCGTTGATCTCGATTTGCCCCGATCGCACGTTATATGTATTAATTGT 46 5685743 0.97796181 9 43 337 0.925 1.86923172 0.425 0.456521739 0.6875 46 6 0 74 X:5685700-5685761 7 60.5 5103 FBgn0029789 138.8966667 4.523333333 6.876666667 0.435575608 13.37509211 8.797867184 1 1 1 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA X 5708608 5708615 + X_5708608_5708615_+ 0.500112101 0.500111463 0.500111782 4.24E-07 CG4096 FBtr0301084|FBtr0301083 5707646|5708513 5708633|5708633 X + 5708581 5708629 3'utr CG4096 FlyBase G58976.1 TTCAGCGAGTAAGCGATCATCCCAGATGTACTTAACTAACTATACGCAC 33 5708607 0.860656772 2 33 225 1 1.612783857 0 0.212121212 0.365853659 33 0 0 41 X:5708581-5708629 8 CG4096 FBtr0301084|FBtr0301083 5707646|5708513 5708633|5708633 GTACTTAA 8mer-A1 dme-miR-252-5p X + 5708582 5708629 3'utr CG4096 FlyBase G44613.1 TCAGCGAGTAAGCGATCATCCCAGATGTACTTAACTAACTATACGCAC 25 5708607 0.868937788 2 25 177 1 1.602059991 0.1 0.48 0.675 25 0 0 40 X:5708582-5708629 8 29 5104 FBgn0029791 34.02 1.16 1.753333333 0.852439741 25 16.53992395 1 1 1 0.1 dme-miR-305-3p 6mer3-8 ATGTGC X 5719935 5719940 - X_5719935_5719940_- 0.996571581 0.999999853 0.998285717 0.002424174 CG32758 FBtr0340670|FBtr0339525 5719372|5719734 5721627|5721627 X - 5719924 5719988 3'utr CG32758 FlyBase G64933.1 TTGATTCCATATCTCTTTCGTATCTGTATTGGATTTGTTAATCTCTCGATGTGCGTAGACCACGT 15 5719951 0.737672875 6 12 149 0.8125 1.113943352 0.25 0.066666667 0.125 15 3 0 13 X:5719924-5719988 6 CG32758 FBtr0339525|FBtr0340670 5719734|5719372 5721627|5721627 ATGTGC 6mer3-8 dme-miR-305-3p X - 5719912 5719960 3'utr CG32758 FlyBase G48934.1 TTGGATTTGTTAATCTCTCGATGTGCGTAGACCACGTAATGTATTTATT 14 5719951 0.771289147 8 13 116 0.947368421 1.255272505 0.421052632 0.285714286 0.473684211 14 1 0 18 X:5719912-5719960 6 12 5105 FBgn0052758 1999.443333 76.95666667 118.6333333 0.00600167 0.15593191 0.101152009 11 11 11 0.1 dme-miR-283-5p 8mer-m1 TGATATTT X 5720040 5720047 - X_5720040_5720047_- 0.535459999 0.490839327 0.513149663 0.0315516 CG32758 FBtr0340670|FBtr0339525 5719372|5719734 5721627|5721627 X - 5720011 5720102 3'utr CG32758 FlyBase G64934.1 TTATAGAATGGCATATAGGCATACATTTATCAACGATGCAAGTGACGTCTGCTTGTGATATTTACAATTTACACGATTATTATGATTAATTT 171 5720050 0.848181391 16 160 1547 0.944186047 1.462397998 0.269767442 0.187134503 0.353488372 171 6 6 203 X:5720011-5720102 8 CG32758 FBtr0339525|FBtr0340670 5719734|5719372 5721627|5721627 TGATATTT 8mer-m1 dme-miR-283-5p X - 5720028 5720096 3'utr CG32758 FlyBase G48935.1 AATGGCATATAGGCATACATTTATCAACGATGCAAGTGACGTCTGCTTGTGATATTTACAATTTACACG 129 5720051 0.988979668 11 118 1168 0.878947368 1.377618431 0.273684211 0.317829457 0.536842105 129 17 6 167 X:5720028-5720096 8 141.5 5106 FBgn0052758 1999.443333 76.95666667 118.6333333 0.070769698 1.838697102 1.192750773 3 4 3.5 0.1 dme-miR-1007-3p 8mer-A1 TGAGCTTA X 5739327 5739334 - X_5739327_5739334_- 0.625363357 0.625363286 0.625363321 7.07E-08 IntS6 FBtr0332400|FBtr0332399|FBtr0070842|FBtr0070841|FBtr0332401 5738661|5738661|5738661|5738661|5738661 5739981|5739981|5739981|5739981|5739981 X - 5739317 5739443 3'utr IntS6 FlyBase G64942.1 AAATTTACTCTTGAGCTTAGGAATAATTTTAAATAGACTTAGATAAATTAAGATAAATCTAAGTGTAGTGTATGTGTATAAAAAAAAAGGGAAAAGTTTAGGAAAAGCTTGAGCTTAATGAGCCCCA 17 5739334 0.979884822 11 17 119 1 1.301029996 0.25 0.176470588 0.3 17 0 0 20 X:5739317-5739443 8 IntS6 FBtr0332401|FBtr0070841|FBtr0070842|FBtr0332399|FBtr0332400 5738661|5738661|5738661|5738661|5738661 5739981|5739981|5739981|5739981|5739981 TGAGCTTA 8mer-A1 dme-miR-1007-3p X - 5739316 5739361 3'utr IntS6 FlyBase G48939.1 AAAAAAGGGAAAAGTTTAGGAAAAGCTTGAGCTTAATGAGCCCCAC 6 5739334 0.966603628 3 6 33 1 0.903089987 0 0.333333333 0.5 6 0 0 8 X:5739316-5739361 8 6.5 5107 FBgn0261383 1360.436667 27.15666667 41.81333333 0.004777878 0.239351909 0.155452806 0 0 0 0.1 dme-miR-11-3p 8mer-m1 CTGTGATG X 5739923 5739930 - X_5739923_5739930_- 0.46227421 0.462272558 0.462273384 1.13E-06 IntS6 FBtr0332400|FBtr0332399|FBtr0070842|FBtr0070841|FBtr0332401 5738661|5738661|5738661|5738661|5738661 5739981|5739981|5739981|5739981|5739981 X - 5739911 5739958 3'utr IntS6 FlyBase G64946.1 AGCCCGCGGGGTCATCCAATCCATCTGTCTGTGATGTCAACAAAATCG 42 5739931 0.793148294 4 40 308 0.960784314 1.69019608 0.058823529 0.19047619 0.333333333 42 2 0 49 X:5739911-5739958 8 IntS6 FBtr0332401|FBtr0070841|FBtr0070842|FBtr0332399|FBtr0332400 5738661|5738661|5738661|5738661|5738661 5739981|5739981|5739981|5739981|5739981 CTGTGATG 8mer-m1 dme-miR-11-3p X - 5739911 5739963 3'utr IntS6 FlyBase G48942.2 CACTGAGCCCGCGGGGTCATCCAATCCATCTGTCTGTGATGTCAACAAAATCG 24 5739932 0.975410477 5 20 149 0.894736842 1.531478917 0.052631579 0.416666667 0.631578947 24 4 0 34 X:5739911-5739963 8 31 5108 FBgn0261383 1360.436667 27.15666667 41.81333333 0.022786801 1.141524488 0.741390306 1 2 1.5 0.1 dme-miR-988-3p 6mer2-7 CAAGGG X 5760411 5760416 - X_5760411_5760416_- 0.530059037 0.994992316 0.762525677 0.328757489 MAPk-Ak2 FBtr0302940|FBtr0070839|FBtr0308577|FBtr0070837 5759906|5759906|5759906|5759906 5760715|5760715|5760715|5760715 X - 5760379 5760447 3'utr MAPk-Ak2 FlyBase G64971.1 TTGTCCCATTATCTATCTATCCATTTCCAGTCAAGGGTTCTTAGGGTATTTTGTAGTCTGAAAAGTGCT 64 5760423 0.779484181 10 61 547 0.971428571 1.832508913 0.014285714 0.078125 0.157142857 64 2 0 68 X:5760379-5760447 6 MAPk-Ak2 FBtr0070837|FBtr0308577|FBtr0070839|FBtr0302940 5759906|5759906|5759906|5759906 5760715|5760715|5760715|5760715 CAAGGG 6mer2-7 dme-miR-988-3p X - 5760376 5760447 3'utr MAPk-Ak2 FlyBase G48962.1 TTGTCCCATTATCTATCTATCCATTTCCAGTCAAGGGTTCTTAGGGTATTTTGTAGTCTGAAAAGTGCTCTT 50 5760423 0.781203743 13 46 434 0.941176471 1.806179974 0.088235294 0.28 0.470588235 50 4 0 64 X:5760376-5760447 6 42 5109 FBgn0013987 1196.673333 75.86 116.6 0.035097298 0.553651463 0.360205832 7 7 7 0.1 dme-miR-2a-2-5p 7mer-m1 GATGAGG X 5760654 5760660 - X_5760654_5760660_- 0.521703094 0.825385453 0.673544273 0.214735884 MAPk-Ak2 FBtr0302940|FBtr0070839|FBtr0308577|FBtr0070837 5759906|5759906|5759906|5759906 5760715|5760715|5760715|5760715 X - 5760621 5760690 3'utr MAPk-Ak2 FlyBase G64972.2 CACGGCCAACCCGGGAGTGAGATGAGATGAGATGAGGAGAGATGGGCGTAGGATGTAGGATGGGCGAACC 18 5760667 0.940777874 4 18 60 1 1.278753601 0.315789474 0.055555556 0.105263158 18 0 0 19 X:5760621-5760690 7 MAPk-Ak2 FBtr0070837|FBtr0308577|FBtr0070839|FBtr0302940 5759906|5759906|5759906|5759906 5760715|5760715|5760715|5760715 GATGAGG 7mer-m1 dme-miR-2a-2-5p X - 5760573 5760678 3'utr MAPk-Ak2 FlyBase G48963.1 GGGAGTGAGATGAGATGAGATGAGGAGAGATGGGCGTAGGATGTAGGATGGGCGAACCATCGGTTTAACACTTAAGCGGATAACAATGTTGTACAATGCTTTACAA 15 5760648 0.971202314 9 14 78 0.904761905 1.278753601 0.523809524 0.333333333 0.523809524 15 2 0 19 X:5760573-5760678 7 10.5 5110 FBgn0013987 1196.673333 75.86 116.6 0.008774324 0.138412866 0.090051458 7 -12 -2.5 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC X 5873919 5873925 - X_5873919_5873925_- 0.66159069 0.661607823 0.661599256 1.21E-05 mof FBtr0070829 5873838 5874268 X - 5873868 5874046 3'utr mof FlyBase G64986.1 TTAAGGAGTTTTACGGATAGGCTGTTGTAACTCTTAATGATAGAACCAAATGTCTAATTCGTTTGGCTAATGTTTTTGGAGAGGGAATTTGGAACAACCATTTAAAAATTTTAAAAACTTCTGTGTTCTTGAAATATATATCTTTAACTACTTTATCTCGAAAAACTCTGGACTTGTTA 90 5873918 0.988649972 22 85 805 0.954545455 1.544068044 0.081818182 0.2 0.345454545 90 3 2 105 X:5873868-5874046 7 mof FBtr0070829 5873838 5874268 TGTGTTC 7mer-m8 dme-miR-317-3p X - 5873899 5873973 3'utr mof FlyBase G48975.1 TTTTGGAGAGGGAATTTGGAACAACCATTTAAAAATTTTAAAAACTTCTGTGTTCTTGAAATATATATCTTTAAC 50 5873927 0.799905759 12 46 445 0.892307692 1.763427994 0.015384615 0.26 0.430769231 50 7 0 58 X:5873899-5873973 7 51 5111 FBgn0014340 384.9966667 15.43 23.56333333 0.132468679 3.305249514 2.164379686 -7 2 -2.5 0.1 dme-miR-1008-3p 6mer3-8 AGCTGT X 5877095 5877100 - X_5877095_5877100_- 1 0.999969732 0.999984866 2.14E-05 CG3016 FBtr0343537|FBtr0070828 5876998|5876998 5877429|5877429 X - 5877080 5877119 3'utr CG3016 FlyBase G64998.1 AAATTCATGCCGTGCTTTTAGCTGTCTGTATTTAGCAATG 11 5877102 0.647605168 7 11 111 1 1.230448921 0.470588235 0.272727273 0.529411765 11 0 0 17 X:5877080-5877119 6 CG3016 FBtr0343537|FBtr0070828 5876998|5876998 5877429|5877429 AGCTGT 6mer3-8 dme-miR-1008-3p X - 5877092 5877132 3'utr CG3016 FlyBase G48981.1 TTTTAAGAATTCCAAATTCATGCCGTGCTTTTAGCTGTCTG 7 5877102 0.98989689 3 5 52 0.875 0.84509804 0 0.142857143 0.25 7 1 0 7 X:5877092-5877132 6 7.5 5112 FBgn0029819 234.6666667 12.53666667 19.16 0.031960227 0.598245148 0.391440501 2 2 2 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 5877399 5877405 - X_5877399_5877405_- 0.661610817 0.661613149 0.661611983 1.63E-06 CG3016 FBtr0343537|FBtr0070828 5876998|5876998 5877429|5877429 X - 5877327 5877461 stop_codon CG3016 FlyBase G65001.1 GTGGCCAGCAGAGGCAGCTAAATCTGCGCTAGTCAGGTGTAGGTCGTCGGTATTATTCTAGTCCATACTTTTGATGTGATGAATATGAATATCCGAAACCAAATCCTTTTCGTCGAACGGTGGCCATAGCAAACA 103 5877406 0.802965481 14 101 895 0.976377953 1.792391689 0.196850394 0.174757282 0.330708661 103 2 1 124 X:5877327-5877461 7 CG3016 FBtr0343537|FBtr0070828 5876998|5876998 5877429|5877429 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X - 5877378 5877461 stop_codon CG3016 FlyBase G48985.1 GTGGCCAGCAGAGGCAGCTAAATCTGCGCTAGTCAGGTGTAGGTCGTCGGTATTATTCTAGTCCATACTTTTGATGTGATGAAT 41 5877406 0.988379341 9 41 372 1 1.799340549 0.253968254 0.463414634 0.650793651 41 0 0 63 X:5877378-5877461 7 57 5113 FBgn0029819 234.6666667 12.53666667 19.16 0.242897727 4.546663122 2.974947808 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA X 5883108 5883115 + X_5883108_5883115_+ 0.648476128 0.648339259 0.648407694 9.67E-05 CG16721 FBtr0339948|FBtr0339948|FBtr0339948|FBtr0345313|FBtr0345313|FBtr0345313|FBtr0070821|FBtr0070821|FBtr0070821 5882788|5882788|5882788|5882788|5882788|5882788|5882788|5882788|5882788 5883391|5883391|5883391|5883391|5883391|5883391|5883391|5883391|5883391 X + 5883041 5883212 3'utr CG16721 FlyBase G58998.1 AATCCCCCTGCAAAAAAGCCAGTGGGATCCGAGGCATCTGAAAGGAATCAAAAATGTGCTGGAGCGTCTGTGATAACAAGAATATTCAACACAAAATTCAAATTTTTGGGGGTTAAGAAAAGTGAACTCGTGAATTATGTGTGCTCCTCAATTTTCGTAATGTAAACCCCCT 116 5883107 0.982662307 22 107 773 0.918518519 1.491361694 0.066666667 0.146551724 0.266666667 116 8 3 124 X:5883041-5883212 8 CG16721 FBtr0070821|FBtr0070821|FBtr0070821|FBtr0345313|FBtr0345313|FBtr0345313|FBtr0339948|FBtr0339948|FBtr0339948 5882788|5882788|5882788|5882788|5882788|5882788|5882788|5882788|5882788 5883391|5883391|5883391|5883391|5883391|5883391|5883391|5883391|5883391 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X + 5883083 5883120 3'utr CG16721 FlyBase G44629.1 AGGAATCAAAAATGTGCTGGAGCGTCTGTGATAACAAG 43 5883107 0.719263795 5 39 229 0.919354839 1.755874856 0.080645161 0.325581395 0.532258065 43 5 0 57 X:5883083-5883120 8 61 5114 FBgn0029820 507.81 24.94 37.79666667 0.120123668 2.445870088 1.613898933 1 1 1 0.1 dme-miR-970-3p 6mer2-7 CTTATG X 5904390 5904395 + X_5904390_5904395_+ 0.96766129 0.764688644 0.866174967 0.143523373 Act5C FBtr0100663|FBtr0070823|FBtr0100662|FBtr0345894 5903827|5903827|5903827|5903827 5904464|5905227|5904788|5905399 X + 5904245 5904463 3'utr Act5C FlyBase G59005.1 AGCTTACACACACACATTCGCGGCATGACAAGGACATCAAGATAAAGAAGAACTTAAAGAAGATATTTCCCAAAGCGCAAAAAGAACACACACACATTGCAAAACACAAACAACACACTAGCGTTTTGTACAATTCGTCAGCAACCTTATGTATTATTTTTTAATTATGATGTAATTATAAACAAAGTGAAACAAAAATATGAAAACAAAAAGGAAAAT 238 5904392 0.956565088 39 219 1672 0.928057554 1.411619706 0.053956835 0.138655462 0.262589928 238 11 9 258 X:5904245-5904463 6 Act5C FBtr0345894|FBtr0100662|FBtr0070823|FBtr0100663 5903827|5903827|5903827|5903827 5905399|5904788|5905227|5904464 CTTATG 6mer2-7 dme-miR-970-3p X + 5904248 5904459 3'utr Act5C FlyBase G44637.1 TTACACACACACATTCGCGGCATGACAAGGACATCAAGATAAAGAAGAACTTAAAGAAGATATTTCCCAAAGCGCAAAAAGAACACACACACATTGCAAAACACAAACAACACACTAGCGTTTTGTACAATTCGTCAGCAACCTTATGTATTATTTTTTAATTATGATGTAATTATAAACAAAGTGAAACAAAAATATGAAAACAAAAAGGA 135 5904392 0.980176313 33 123 961 0.921052632 1.544068044 0.036842105 0.311111111 0.510526316 135 11 4 175 X:5904248-5904459 6 87.5 5115 FBgn0000042 40624.21333 2527.44 3863.87 0.002153888 0.034620011 0.022645689 -2 -2 -2 0.1 dme-miR-999-3p 6mer3-8 AGTTAA X 5910741 5910746 + X_5910741_5910746_+ 1 1 1 0 CG12236 FBtr0070826 5910640 5911789 X + 5910620 5910825 stop_codon CG12236 FlyBase G59018.1 GGCCATCAAGACGGAGAACTGATGCGTCTTCATAAGTCTCGGTCGCCTGCGAGCCGCATCTGGATCTGCAACTGCATCTGGATTGAGATCGATAGGATATACGGATAGGGGAGAGAGATATAGTTAATTACGTCCAGCTTAGCGAGCAGCCAGCAAAACCAATCAACCCAACCAGCCCATTCCCTCGTGTTTCGATCAAAGGCCCC 82 5910740 0.977207903 21 75 494 0.913043478 1.924279286 0.141304348 0.085365854 0.184782609 82 8 0 84 X:5910620-5910825 6 CG12236 FBtr0070826 5910640 5911789 AGTTAA 6mer3-8 dme-miR-999-3p X + 5910684 5910825 3'utr CG12236 FlyBase G44649.1 TCTGCAACTGCATCTGGATTGAGATCGATAGGATATACGGATAGGGGAGAGAGATATAGTTAATTACGTCCAGCTTAGCGAGCAGCCAGCAAAACCAATCAACCCAACCAGCCCATTCCCTCGTGTTTCGATCAAAGGCCCC 43 5910747 0.973826228 11 43 267 1 1.838849091 0.028985507 0.465116279 0.666666667 43 0 0 69 X:5910684-5910825 6 43.5 5116 FBgn0029822 534.9233333 22.61666667 34.62 0.081320065 1.923360354 1.256499133 1 -6 -2.5 0.1 dme-miR-33-5p 7mer-A1 AATGCAA X 5910857 5910863 + X_5910857_5910863_+ 0.782911815 0.782911824 0.78291182 0 CG12236 FBtr0070826 5910640 5911789 X + 5910826 5910876 3'utr CG12236 FlyBase G59019.1 AAAACGAAAACTAGCCAAATTTGTCAACTTAAATGCAAAGCAGATAGGAGT 14 5910855 0.952703307 5 12 81 0.857142857 1.079181246 0.214285714 0 0 14 2 0 12 X:5910826-5910876 7 CG12236 FBtr0070826 5910640 5911789 AATGCAA 7mer-A1 dme-miR-33-5p X + 5910827 5910875 3'utr CG12236 FlyBase G44650.1 AAACGAAAACTAGCCAAATTTGTCAACTTAAATGCAAAGCAGATAGGAG 7 5910855 0.891859222 3 6 35 0.769230769 1 0.076923077 0.428571429 0.692307692 7 3 0 10 X:5910827-5910875 7 8 5117 FBgn0029822 534.9233333 22.61666667 34.62 0.014955414 0.353721444 0.2310803 2 2 2 0.1 dme-miR-79-3p 6mer3-8 TAGCTT X 5911212 5911217 + X_5911212_5911217_+ 0.920336279 0.994880567 0.957608423 0.05271078 CG12236 FBtr0070826 5910640 5911789 X + 5911155 5911286 3'utr CG12236 FlyBase G59022.1 AAACACACCCAAGATGACAAGAATTTTGGAAGATTTGAGAGCACTTTGGATGCTTAATAGCTTAGATCGAGTGATACTATGTGCAAGAGAACAGAACACAAGGATTTAATTTGATTGTAGAAAACTAATGTT 19 5911200 0.982083294 14 18 136 0.954545455 1.322219295 0.363636364 0.105263158 0.227272727 19 1 0 21 X:5911155-5911286 6 CG12236 FBtr0070826 5910640 5911789 TAGCTT 6mer3-8 dme-miR-79-3p X + 5911181 5911222 3'utr CG12236 FlyBase G44653.1 TGGAAGATTTGAGAGCACTTTGGATGCTTAATAGCTTAGATC 7 5911201 0.983290798 5 7 50 1 1.041392685 0.363636364 0.428571429 0.636363636 7 0 0 11 X:5911181-5911222 6 8 5118 FBgn0029822 534.9233333 22.61666667 34.62 0.014955414 0.353721444 0.2310803 12 11 11.5 0.1 dme-miR-283-5p 8mer-A1 TGATATTA X 5911354 5911361 + X_5911354_5911361_+ 0.592188997 0.592192034 0.592190516 2.12E-06 CG12236 FBtr0070826 5910640 5911789 X + 5911290 5911360 3'utr CG12236 FlyBase G59023.1 CTTAGCCCATATCGATCACTTTATTTTAGCTCTTAAACAACCTCATATGTATTTTTTGAAACTCTGATATT 16 5911333 0.991304349 9 15 163 0.941176471 0.903089987 0.058823529 0.0625 0.117647059 16 0 1 16 X:5911290-5911360 7 CG12236 FBtr0070826 5910640 5911789 TGATATTA 8mer-A1 dme-miR-283-5p X + 5911307 5911434 3'utr CG12236 FlyBase G44654.1 ACTTTATTTTAGCTCTTAAACAACCTCATATGTATTTTTTGAAACTCTGATATTATTCAGTTTTTGTATATAGAGCTAGGCAACTTAACCTAAATTAAGGTAAACCCAAAAACAAAGTCCCCCCTCCA 17 5911334 0.986087962 11 16 140 1 1.322219295 0.285714286 0.235294118 0.380952381 17 0 0 21 X:5911307-5911434 8 1.5 5119 FBgn0029822 534.9233333 22.61666667 34.62 0.00280414 0.066322771 0.043327556 21 20 20.5 0.1 dme-miR-305-5p 7mer-A1 GTACAAA X 5911537 5911543 + X_5911537_5911543_+ 0.468893876 0.782911134 0.625902505 0.222043692 CG12236 FBtr0070826 5910640 5911789 X + 5911463 5911701 3'utr CG12236 FlyBase G59025.1 AGGAAGGAAGCTGTGTACTTTGCTCACAAGCAGAGATCAGGAGAATATGAGAAAATATATATATTACCCCTTGTGTACAAATTTAAATACGATTTAATCCAATTACCCGGCGCGCTTTTGACCATCTGTGTTCAGCATTAGAGCGTTGGCAGTTGACTGTAAATTAGCTAAATTAGTTTTAGTTTAGTTTAAGACACCACAAATTCGATTGGACATAGTTTAGTTATTCGGTGTAACTT 65 5911534 0.981049885 27 65 467 1 1.826074803 0.104477612 0.030769231 0.059701493 65 0 0 67 X:5911463-5911701 7 CG12236 FBtr0070826 5910640 5911789 GTACAAA 7mer-A1 dme-miR-305-5p X + 5911516 5911547 3'utr CG12236 FlyBase G44656.1 AATATATATATTACCCCTTGTGTACAAATTTA 7 5911534 0.783649099 3 7 60 1 1.079181246 0 0.428571429 0.666666667 7 0 0 12 X:5911516-5911547 7 11.5 5120 FBgn0029822 534.9233333 22.61666667 34.62 0.021498408 0.508474576 0.332177932 3 3 3 0.1 dme-miR-1012-3p 6mer3-8 TTGACT X 5911615 5911620 + X_5911615_5911620_+ 0.999999992 0.999998103 0.999999047 1.34E-06 CG12236 FBtr0070826 5910640 5911789 X + 5911463 5911701 3'utr CG12236 FlyBase G59025.1 AGGAAGGAAGCTGTGTACTTTGCTCACAAGCAGAGATCAGGAGAATATGAGAAAATATATATATTACCCCTTGTGTACAAATTTAAATACGATTTAATCCAATTACCCGGCGCGCTTTTGACCATCTGTGTTCAGCATTAGAGCGTTGGCAGTTGACTGTAAATTAGCTAAATTAGTTTTAGTTTAGTTTAAGACACCACAAATTCGATTGGACATAGTTTAGTTATTCGGTGTAACTT 65 5911616 0.981049885 27 65 467 1 1.826074803 0.104477612 0.030769231 0.059701493 65 0 0 67 X:5911463-5911701 6 CG12236 FBtr0070826 5910640 5911789 TTGACT 6mer3-8 dme-miR-1012-3p X + 5911553 5911636 3'utr CG12236 FlyBase G44657.1 GATTTAATCCAATTACCCGGCGCGCTTTTGACCATCTGTGTTCAGCATTAGAGCGTTGGCAGTTGACTGTAAATTAGCTAAATT 33 5911616 0.943335195 13 31 215 0.916666667 1.041392685 0.0625 0.333333333 0.541666667 33 1 3 44 X:5911553-5911636 6 24 5121 FBgn0029822 534.9233333 22.61666667 34.62 0.044866243 1.061164333 0.693240901 -1 -1 -1 0.1 dme-miR-932-5p 6mer3-8 GGAATT X 5913105 5913110 - X_5913105_5913110_- 0.990303242 0.999975397 0.99513932 0.006839278 CG3011 FBtr0290235|FBtr0070827|FBtr0345317 5913065|5913065|5913065 5913196|5913196|5913196 X - 5913074 5913130 3'utr CG3011 FlyBase G65006.1 GCTTGTTAATATCATAAGTGGGAATTAGTAGTTAAGCCATTAAACGCATTTCAGTTT 17 5913116 0.989521122 6 15 147 0.9 0.954242509 0.3 0.117647059 0.25 17 1 1 18 X:5913074-5913130 6 CG3011 FBtr0070827|FBtr0345317|FBtr0290235 5913065|5913065|5913065 5913196|5913196|5913196 GGAATT 6mer3-8 dme-miR-932-5p X - 5913075 5913148 3'utr CG3011 FlyBase G48988.1 TACATCCTCGAAAAGTCCGCTTGTTAATATCATAAGTGGGAATTAGTAGTTAAGCCATTAAACGCATTTCAGTT 15 5913116 0.980095211 10 15 110 1 1.342422681 0 0.466666667 0.636363636 15 0 0 22 X:5913075-5913148 6 13 5122 FBgn0029823 724.9866667 47.58333333 72.74 0.017931364 0.273204904 0.178718724 6 6 6 0.1 dme-bantam-3p 6mer3-8 TGATCT X 5941596 5941601 + X_5941596_5941601_+ 0.999999985 0.999998902 0.999999443 7.78E-07 CG3726 FBtr0343051|FBtr0070858 5941403|5941362 5941852|5941664 X + 5941492 5941622 3'utr CG3726 FlyBase G59037.1 AAAGACAGCTAGACGAGGCTAGTTTTGGATCCTGAGTAATGCTTTCCTGAATCCTGAATTCCCACATTAATGTGTTGTTCCCATCGGTGGGTCACAACTATAACTGATCTACACATTTAGGATCTTATTAT 29 5941596 0.745693469 15 28 195 0.96875 1.491361694 0.0625 0.103448276 0.1875 29 1 0 31 X:5941492-5941622 6 CG3726 FBtr0343051|FBtr0070858 5941403|5941362 5941852|5941664 TGATCT 6mer3-8 dme-bantam-3p X + 5941529 5941623 3'utr CG3726 FlyBase G44662.1 AATGCTTTCCTGAATCCTGAATTCCCACATTAATGTGTTGTTCCCATCGGTGGGTCACAACTATAACTGATCTACACATTTAGGATCTTATTATT 16 5941598 0.985706042 8 14 126 0.888888889 1.204119983 0.111111111 0.125 0.222222222 16 2 0 16 X:5941529-5941623 6 8.5 5123 FBgn0029824 462.5733333 18.42 28.35333333 0.018375465 0.46145494 0.299788385 0 -2 -1 0.1 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA X 5944411 5944418 + X_5944411_5944418_+ 0.625363525 0.624367382 0.624865453 0.000704349 CG12728 FBtr0343052 5944386 5945250 X + 5944260 5944448 stop_codon CG12728 FlyBase G59047.1 AGTCCGATCAGAATTGGGATTTAATTCTTCGAACTGTGCTGGAAGATATCAAAGCCGTACTGATTTACTCAACTGAACGCATCGAAAAAGCGATCCAGAGCTATATCAATAAGTTAGCGCAAAAATAATTTGGAAACGATCTCATTCTAAATGGTGCTACAAGCAAAACTTCACACTTAGTACATACGT 213 5944410 0.982954048 25 191 1452 0.911290323 1.655138435 0.177419355 0.14084507 0.262096774 213 18 4 226 X:5944260-5944448 8 CG12728 FBtr0070859|FBtr0343052 5944386|5944386 5944622|5945250 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" X + 5944287 5944441 stop_codon CG12728 FlyBase G44671.1 TTCGAACTGTGCTGGAAGATATCAAAGCCGTACTGATTTACTCAACTGAACGCATCGAAAAAGCGATCCAGAGCTATATCAATAAGTTAGCGCAAAAATAATTTGGAAACGATCTCATTCTAAATGGTGCTACAAGCAAAACTTCACACTTAGTA 125 5944410 0.855694508 20 113 848 0.920903955 1.367089564 0.169491525 0.304 0.508474576 125 8 6 163 X:5944287-5944441 8 76 5124 FBgn0029825 316.1666667 16.35666667 25.15 0.240379547 4.646423477 3.021868787 1 1 1 0.1 dme-miR-184-5p 6mer3-8 TGATAA X 5944674 5944679 + X_5944674_5944679_+ 1 0.999815066 0.999907533 0.000130744 CG12728 FBtr0343052 5944386 5945250 X + 5944654 5944764 3'utr CG12728 FlyBase G59049.1 TGACAAACACAAATCCTCAGTGATAAAAGGATAAAGACATGATTCCATTTGTTGATTAGGTATTCGTACCTAAGTCCATCGAACAGCAATCAAATGAAACAAAACAATGTA 17 5944670 0.997549383 7 15 84 0.888888889 1.204119983 0.222222222 0.058823529 0.111111111 17 2 0 16 X:5944654-5944764 6 CG12728 FBtr0343052 5944386 5945250 TGATAA 6mer3-8 dme-miR-184-5p X + 5944662 5944690 3'utr CG12728 FlyBase G44674.1 ACAAATCCTCAGTGATAAAAGGATAAAGA 7 5944670 0.691150553 3 6 26 0.9 0.653212514 0.3 0.428571429 0.6 7 0 1 9 X:5944662-5944690 6 8 5125 FBgn0029825 316.1666667 16.35666667 25.15 0.02530311 0.489097208 0.318091451 4 4 4 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 5944791 5944796 + X_5944791_5944796_+ 0.999995016 0.999994722 0.999994869 2.12E-07 CG12728 FBtr0343052 5944386 5945250 X + 5944766 5944823 3'utr CG12728 FlyBase G59050.1 AGTGTTGTAGATTTTAAAACGTCTTACCAAAACACCCTCAGTACACAAACAAGTTGAG 6 5944789 0.948365264 3 4 29 0.857142857 0.77815125 0.285714286 0.166666667 0.285714286 6 1 0 6 X:5944766-5944823 6 CG12728 FBtr0343052 5944386 5945250 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 5944758 5944806 3'utr CG12728 FlyBase G44675.1 CAATGTATAGTGTTGTAGATTTTAAAACGTCTTACCAAAACACCCTCAG 10 5944790 0.916403571 4 10 40 1 1.204119983 0.125 0.6 0.75 10 0 0 16 X:5944758-5944806 6 6.5 5126 FBgn0029825 316.1666667 16.35666667 25.15 0.020558777 0.397391482 0.258449304 2 1 1.5 0.1 dme-miR-190-5p 7mer-m8 ACATATC X 5944866 5944872 + X_5944866_5944872_+ 0.669212624 0.674514887 0.671863756 0.003749292 CG12728 FBtr0343052 5944386 5945250 X + 5944841 5944874 3'utr CG12728 FlyBase G59051.1 AGCAACTAACTCCTATCTCTATGGAACATATCGA 7 5944861 0.809044662 3 6 39 0.857142857 0.77815125 0.285714286 0 0 7 1 0 6 X:5944841-5944874 7 CG12728 FBtr0343052 5944386 5945250 ACATATC 7mer-m8 dme-miR-190-5p X + 5944829 5944868 3'utr CG12728 FlyBase G44676.1 TTGCATAGAAGCAGCAACTAACTCCTATCTCTATGGAACA 5 5944857 0.978181009 2 4 29 0.875 0.84509804 0 0.4 0.625 5 1 0 7 X:5944829-5944868 3 3.5 5127 FBgn0029825 316.1666667 16.35666667 25.15 0.011070111 0.213980029 0.13916501 5 9 7 0.1 dme-miR-33-5p 7mer-m8 CAATGCA X 5944970 5944976 + X_5944970_5944976_+ 0.60280001 0.658497811 0.630648911 0.039384292 CG12728 FBtr0343052 5944386 5945250 X + 5944927 5944995 3'utr CG12728 FlyBase G59052.1 CGACCGATTAGTCAGGGCTTTCCAGCGGTTATAACCTCCTGATCAATGCATTTTATGTTAAATATTTTT 55 5944969 0.809215622 11 52 463 0.940298507 1.322219295 0.014925373 0.163636364 0.313432836 55 2 2 63 X:5944927-5944995 7 CG12728 FBtr0343052 5944386 5945250 CAATGCA 7mer-m8 dme-miR-33-5p X + 5944935 5944990 3'utr CG12728 FlyBase G44677.1 TAGTCAGGGCTTTCCAGCGGTTATAACCTCCTGATCAATGCATTTTATGTTAAATA 38 5944969 0.820869976 8 36 286 0.953125 1.183269844 0.03125 0.447368421 0.671875 38 0 3 61 X:5944935-5944990 7 43 5128 FBgn0029825 316.1666667 16.35666667 25.15 0.136004217 2.628897493 1.709741551 1 1 1 0.1 dme-bantam-3p 6mer3-8 TGATCT X 5945238 5945243 + X_5945238_5945243_+ 0.999998279 0.999999872 0.999999076 1.13E-06 CG12728 FBtr0343052 5944386 5945250 X + 5945219 5945256 3'utr CG12728 FlyBase G59054.1 GGTGGGTCACAACTATAACTGATCTACACATTTAGGAT 6 5945237 0.965830062 4 6 33 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 X:5945219-5945256 6 CG12728 FBtr0343052 5944386 5945250 TGATCT 6mer3-8 dme-bantam-3p X + 5945202 5945247 3'utr CG12728 FlyBase G44679.1 AATGTGTTGTTCCCATCGGTGGGTCACAACTATAACTGATCTACAC 11 5945239 0.721349094 5 10 63 0.933333333 0.84509804 0 0.363636364 0.533333333 11 0 1 14 X:5945202-5945247 6 7 5129 FBgn0029825 316.1666667 16.35666667 25.15 0.022140221 0.427960057 0.27833002 1 -1 0 0.1 dme-miR-988-3p 6mer3-8 ACAAGG X 5947522 5947527 + X_5947522_5947527_+ 0.999999993 0.999994272 0.999997132 4.03E-06 CG32756 FBtr0070860|FBtr0343295 5947414|5947414 5947851|5948353 X + 5947487 5947544 3'utr CG32756 FlyBase G59066.1 TTTTTTTTTTGAGATAAAAACAAATCCTCAGTGATACAAGGATAAAAGACATGATTCC 20 5947520 0.973748021 7 16 80 0.826086957 0.977723605 0.217391304 0.15 0.260869565 20 3 1 19 X:5947487-5947544 6 CG32756 FBtr0343295|FBtr0070860 5947414|5947414 5948353|5947851 ACAAGG 6mer3-8 dme-miR-988-3p X + 5947502 5947560 3'utr CG32756 FlyBase G44688.1 AAAAACAAATCCTCAGTGATACAAGGATAAAAGACATGATTCCATTTGTTGATTAGGTA 11 5947521 0.949583396 5 9 56 0.947368421 1.255272505 0.315789474 0.454545455 0.684210526 11 1 0 18 X:5947502-5947560 6 13.5 5130 FBgn0052756 250.4866667 13.61 20.71333333 0.053895084 0.991917708 0.651754104 2 1 1.5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 5947639 5947644 + X_5947639_5947644_+ 0.995292991 0.999957405 0.997625198 0.003298229 CG32756 FBtr0070860|FBtr0343295 5947414|5947414 5947851|5948353 X + 5947590 5947663 3'utr CG32756 FlyBase G59067.1 AAATGAAACAAAACAATGTATAGTGTTGTAGATTTTAAAACGACATCTTACCAAAACACCCTCAGTACACAAAC 36 5947638 0.952006227 9 34 152 0.974358974 1.579783597 0.051282051 0.083333333 0.153846154 36 1 0 38 X:5947590-5947663 6 CG32756 FBtr0343295|FBtr0070860 5947414|5947414 5948353|5947851 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 5947627 5947663 3'utr CG32756 FlyBase G44689.1 AAACGACATCTTACCAAAACACCCTCAGTACACAAAC 21 5947638 0.702096727 3 19 63 0.942857143 1.51851394 0.028571429 0.476190476 0.685714286 21 2 0 33 X:5947627-5947663 6 25 5131 FBgn0052756 250.4866667 13.61 20.71333333 0.099805712 1.836884644 1.206952044 1 1 1 0.1 dme-miR-283-5p 8mer-A1 TGATATTA X 5947724 5947731 + X_5947724_5947731_+ 0.592106525 0.591929676 0.5920181 0.000125016 CG32756 FBtr0070860|FBtr0343295 5947414|5947414 5947851|5948353 X + 5947686 5947748 3'utr CG32756 FlyBase G59068.1 AGCAGCAACTAACTCCTATCTCTATGGAACATATCGACTGATATTAAAATGCGTCCGATTAGT 152 5947727 0.693801718 11 145 926 0.960591133 2.290034611 0.009852217 0.276315789 0.458128079 152 8 0 195 X:5947686-5947748 8 CG32756 FBtr0343295|FBtr0070860 5947414|5947414 5948353|5947851 TGATATTA 8mer-A1 dme-miR-283-5p X + 5947695 5947791 3'utr CG32756 FlyBase G44690.1 TAACTCCTATCTCTATGGAACATATCGACTGATATTAAAATGCGTCCGATTAGTCACGGCTTTCCAACGGTTATAGCCTCCTGATCAATGCATTTTA 131 5947727 0.616512411 12 125 830 0.967032967 1.944482672 0.027472527 0.290076336 0.489010989 131 5 1 176 X:5947695-5947791 8 135 5132 FBgn0052756 250.4866667 13.61 20.71333333 0.538950842 9.919177076 6.517541036 -3 -3 -3 0.1 dme-miR-1008-3p 6mer3-8 AGCTGT X 6008306 6008311 - X_6008306_6008311_- 0.960528298 0.959708352 0.960118325 0.000579757 mab-21 FBtr0070890 6008181 6008807 X - 6008252 6008353 3'utr mab-21 FlyBase G65023.1 CCATTTGCTATTAGCAAAGTGCAGAGCAAAATTAGCTAAATTAGCTGTAAGTCCTAATGAAACTGAGACAGCCGAGTGAAGGAATATTTCCCCGTCGGTCCT 767 6008295 0.807548448 17 741 3037 0.964989059 2.246498581 0.031728665 0.162972621 0.297592998 767 28 4 882 X:6008252-6008353 6 mab-21 FBtr0070890 6008181 6008807 AGCTGT 6mer3-8 dme-miR-1008-3p X - 6008251 6008343 3'utr mab-21 FlyBase G49002.1 TTAGCAAAGTGCAGAGCAAAATTAGCTAAATTAGCTGTAAGTCCTAATGAAACTGAGACAGCCGAGTGAAGGAATATTTCCCCGTCGGTCCTA 471 6008295 0.835135542 13 446 1693 0.955072464 1.818885415 0.034782609 0.350318471 0.556521739 471 22 9 659 X:6008251-6008343 6 177.5 5133 FBgn0029003 3 0.19 0.303333333 59.16666667 934.2105263 585.1648352 -16 -16 -16 0.1 dme-miR-1003-3p 7mer-A1 TGTGAGA X 6008577 6008583 - X_6008577_6008583_- 0.823331034 0.823331715 0.823331374 4.95E-07 mab-21 FBtr0070890 6008181 6008807 X - 6008374 6008654 3'utr mab-21 FlyBase G65024.1 TCTACAACTAAAGACAAAGGATCGCAAGGATCAAGGGCGCTGGGAGGGTCGAAGCTGGAGAAGGAGAAATGTGTGAGAAAGATAGAGAGAAAGCAGTGAAATTGTAACCCAAATACTATTTGATATTTCGCTAGATCGTAACTTAAGTTTAGGTGCTTTCGAAAAGTATACGCCGCTTACAGAGTTTCCTATAATTAGAGCATACTTAGTGTTATCCATTTAGATCGTCATCGTCGCAAAACGCACAAAAGTTACCAACTAGTTACATTTGTATGTACGAC 1232 6008585 0.955179246 64 1147 6608 0.932238193 2.134177108 0.248459959 0.151785714 0.284736482 1232 90 9 1362 X:6008374-6008654 7 mab-21 FBtr0070890 6008181 6008807 TGTGAGA 7mer-A1 dme-miR-1003-3p X - 6008360 6008665 3'utr mab-21 FlyBase G49003.1 GATTTTTTTTTTCTACAACTAAAGACAAAGGATCGCAAGGATCAAGGGCGCTGGGAGGGTCGAAGCTGGAGAAGGAGAAATGTGTGAGAAAGATAGAGAGAAAGCAGTGAAATTGTAACCCAAATACTATTTGATATTTCGCTAGATCGTAACTTAAGTTTAGGTGCTTTCGAAAAGTATACGCCGCTTACAGAGTTTCCTATAATTAGAGCATACTTAGTGTTATCCATTTAGATCGTCATCGTCGCAAAACGCACAAAAGTTACCAACTAGTTACATTTGTATGTACGACATTTTTTTTTTTTT 825 6008585 0.966336813 55 753 4017 0.915213946 1.916453949 0.270206022 0.375757576 0.591917591 825 94 13 1155 X:6008360-6008665 7 536.5 5134 FBgn0029003 3 0.19 0.303333333 178.8333333 2823.684211 1768.681319 2 2 2 0.1 dme-miR-14-3p 8mer-A1 AAGACTGA X 6035871 6035878 - X_6035871_6035878_- 0.643553199 0.643565445 0.643559322 8.63E-06 rux FBtr0307288|FBtr0070889 6035751|6035751 6035992|6035992 X - 6035849 6035893 3'utr rux FlyBase G65031.1 CGTAATTATTTGAACAAGACTGATTGCACCCGCTTTGGTTCCGCT 68 6035870 0.719913162 9 60 454 0.897435897 1.544068044 0.012820513 0.117647059 0.230769231 68 7 1 70 X:6035849-6035893 8 rux FBtr0307288|FBtr0070889 6035751|6035751 6035992|6035992 AAGACTGA 8mer-A1 dme-miR-14-3p X - 6035850 6035893 3'utr rux FlyBase G49011.1 CGTAATTATTTGAACAAGACTGATTGCACCCGCTTTGGTTCCGC 66 6035870 0.689173382 6 57 431 0.852941176 1.939519253 0.068627451 0.46969697 0.656862745 66 15 0 87 X:6035850-6035893 8 66.5 5135 FBgn0003302 80.70666667 7.456666667 11.36 0.823971584 8.91819401 5.853873239 -8 -8 -8 0.1 dme-miR-986-5p 6mer3-8 ATTCGA X 6083461 6083466 - X_6083461_6083466_- 0.949773925 0.99998541 0.974879667 0.035504892 raptor FBtr0345895|FBtr0332964 6082632|6082657 6084600|6084600 X - 6083389 6083485 3'utr raptor FlyBase G65040.1 AATGTTAGGAATGGAAAAGATTCGAAGGAACTGGAGTTCAACAATGATCAGATTAGGATTAGGACTAGTTTTGTAAGTGATGAGCGGCGGAGAGCGG 86 6083441 0.974462355 8 83 538 0.960784314 1.991226076 0.254901961 0.151162791 0.284313725 86 4 0 98 X:6083389-6083485 6 raptor FBtr0345895|FBtr0332964 6082632|6082657 6084600|6084600 ATTCGA 6mer3-8 dme-miR-986-5p X - 6083395 6083500 3'utr raptor FlyBase G49014.1 AACTGATATAGAGATAATGTTAGGAATGGAAAAGATTCGAAGGAACTGGAGTTCAACAATGATCAGATTAGGATTAGGACTAGTTTTGTAAGTGATGAGCGGCGGA 61 6083454 0.916107766 13 58 373 0.975609756 1.903089987 0.329268293 0.31147541 0.487804878 61 2 0 80 X:6083395-6083500 6 24 5136 FBgn0029840 503.1666667 8.506666667 12.99666667 0.047697913 2.821316614 1.84662734 -25 -12 -18.5 0.1 dme-bantam-3p 6mer2-7 GATCTC X 6083706 6083711 - X_6083706_6083711_- 0.826013565 0.816401743 0.821207654 0.00679664 raptor FBtr0345895|FBtr0332964 6082632|6082657 6084600|6084600 X - 6083681 6083735 5'utr raptor FlyBase G65041.1 CTGCCCGGCTGCCCGCAGGACAAGGATCTCTGTCCGCTGGCCACGCTGCGTCGGA 20 6083705 0.664441986 3 20 81 1 1.380211242 0.208333333 0.2 0.333333333 20 0 0 24 X:6083681-6083735 6 raptor FBtr0345895|FBtr0332964 6082632|6082657 6084600|6084600 GATCTC 6mer2-7 dme-bantam-3p X - 6083646 6083731 5'utr raptor FlyBase G49016.1 CCGGCTGCCCGCAGGACAAGGATCTCTGTCCGCTGGCCACGCTGCGTCGGATTTACGCCAATAGCGTGGACCACTGCGACCGCGAG 22 6083705 0.953140839 4 21 89 1 1.505149978 0.1875 0.380952381 0.59375 21 0 0 32 X:6083646-6083731 6 18 5137 FBgn0029840 503.1666667 8.506666667 12.99666667 0.035773435 2.115987461 1.384970505 -6 -6 -6 0.1 dme-miR-79-3p 6mer3-8 TAGCTT X 610727 610732 - X_610727_610732_- 0.914312687 0.70033173 0.807322208 0.151307416 CG13366 FBtr0339433|FBtr0110791|FBtr0339431|FBtr0339432|FBtr0070161|FBtr0339430 610547|610547|610547|610547|610547|610547 611251|611251|611251|611251|611251|611251 X - 610664 610771 3'utr CG13366 FlyBase G63849.1 ATTTTAATGCGTAAATCGACGATTGAGCTGGACGATGATTAGCTTGACGACGAAACATTACTATACAGATAATAAGGAGATGGACTAGCTTTAGCGTATATATAACTA 28 610733 0.970531813 8 27 161 1 1.477121255 0.333333333 0.071428571 0.133333333 28 0 0 30 X:610664-610771 6 CG13366 FBtr0110791|FBtr0339433|FBtr0339430|FBtr0070161|FBtr0339432|FBtr0339431 610547|610547|610547|610547|610547|610547 611251|611251|611251|611251|611251|611251 TAGCTT 6mer3-8 dme-miR-79-3p X - 610715 610746 3'utr CG13366 FlyBase G48126.1 AGCTGGACGATGATTAGCTTGACGACGAAACA 5 610733 0.942176047 3 5 23 1 0.84509804 0.571428571 0.4 0.571428571 5 0 0 7 X:610715-610746 6 11 5138 FBgn0025633 323.6666667 8.64 13.25333333 0.033985582 1.273148148 0.829979879 1 1 1 0.1 dme-miR-317-5p 7mer-A1 TATCCCA X 610836 610842 - X_610836_610842_- 0.821898423 0.573564339 0.697731381 0.175598726 CG13366 FBtr0339433|FBtr0110791|FBtr0339431|FBtr0339432|FBtr0070161|FBtr0339430 610547|610547|610547|610547|610547|610547 611251|611251|611251|611251|611251|611251 X - 610800 610855 3'utr CG13366 FlyBase G63850.1 GGACAACGATGACTATCCCAGCCTGTTCCCACTGTACATGGGTGTTTATATAGGTG 16 610831 0.964751918 5 15 82 0.95 1.278753601 0.2 0.1875 0.35 16 1 0 19 X:610800-610855 7 CG13366 FBtr0110791|FBtr0339433|FBtr0339430|FBtr0070161|FBtr0339432|FBtr0339431 610547|610547|610547|610547|610547|610547 611251|611251|611251|611251|611251|611251 TATCCCA 7mer-A1 dme-miR-317-5p X - 610812 610857 3'utr CG13366 FlyBase G48127.1 AAGGACAACGATGACTATCCCAGCCTGTTCCCACTGTACATGGGTG 10 610830 0.911721357 3 9 47 1 1.255272505 0.222222222 0.5 0.722222222 10 0 0 18 X:610812-610857 7 11 5139 FBgn0025633 323.6666667 8.64 13.25333333 0.033985582 1.273148148 0.829979879 -11 -12 -11.5 0.1 dme-miR-190-5p 6mer2-7 CATATC X 611021 611026 - X_611021_611026_- 0.942715501 0.999970511 0.971343006 0.040485399 CG13366 FBtr0339433|FBtr0110791|FBtr0339431|FBtr0339432|FBtr0070161|FBtr0339430 610547|610547|610547|610547|610547|610547 611251|611251|611251|611251|611251|611251 X - 610953 611093 3'utr CG13366 FlyBase G63851.1 TCTCCAATTCCTCTAGCTTGTACACTTTTTTCCTGTAAAGCCTCTTCTGCTTTAGTGCGTCTGATTCCATATCCTTGCCCATGTATAATGGTCGTCCGATGCAGCGCCCCATATTCAGACATCGCTACTTTTAAATATCAT 22 611040 0.989923359 14 19 196 0.923076923 1.079181246 0.153846154 0.181818182 0.307692308 22 1 1 24 X:610953-611093 6 CG13366 FBtr0110791|FBtr0339433|FBtr0339430|FBtr0070161|FBtr0339432|FBtr0339431 610547|610547|610547|610547|610547|610547 611251|611251|611251|611251|611251|611251 CATATC 6mer2-7 dme-miR-190-5p X - 610981 611067 3'utr CG13366 FlyBase G48128.1 TTTTTCCTGTAAAGCCTCTTCTGCTTTAGTGCGTCTGATTCCATATCCTTGCCCATGTATAATGGTCGTCCGATGCAGCGCCCCATA 12 611038 0.986741672 7 11 111 0.9375 1.176091259 0 0.333333333 0.5 12 1 0 15 X:610981-611067 6 6.5 5140 FBgn0025633 323.6666667 8.64 13.25333333 0.020082389 0.752314815 0.490442656 14 12 13 0.1 dme-miR-8-3p 7mer-A1 AGTATTA X 6223122 6223128 - X_6223122_6223128_- 0.823349123 0.823349401 0.823349262 2.12E-07 sqh FBtr0339502|FBtr0339503|FBtr0070877|FBtr0339504|FBtr0345294 6223059|6223059|6223059|6223059|6223059 6223406|6223406|6223406|6223406|6223406 X - 6223103 6223220 3'utr sqh FlyBase G65056.2 AGTAGCCAACACCAGCGATTGTTATGTACGACAGTGTAGTGTGTGAGATGTTGGTGCCAGATAACACGATTTCCCGAAAAACTCCTTTCATAAGTATTAACTCATTGAATATACATAT 78 6223130 0.762012548 24 73 558 0.955555556 1.934498451 0.088888889 0.128205128 0.244444444 78 4 0 86 X:6223103-6223220 7 sqh FBtr0345294|FBtr0070877|FBtr0339504|FBtr0339502|FBtr0339503 6223059|6223059|6223059|6223059|6223059 6223406|6223406|6223406|6223406|6223406 AGTATTA 7mer-A1 dme-miR-8-3p X - 6223068 6223188 3'utr sqh FlyBase G49023.1 AGTGTAGTGTGTGAGATGTTGGTGCCAGATAACACGATTTCCCGAAAAACTCCTTTCATAAGTATTAACTCATTGAATATACATATATATTACCTATATACAAATACATACTTATACAAGA 48 6223130 0.985277353 16 44 360 0.942857143 1.51851394 0.185714286 0.291666667 0.514285714 48 3 1 66 X:6223068-6223188 7 38 5141 FBgn0003514 2178.836667 260.73 395.3566667 0.0174405 0.14574464 0.096115744 2 2 2 0.1 dme-miR-252-5p 7mer-m8 GTACTTA X 6223245 6223251 - X_6223245_6223251_- 0.579938644 0.587094004 0.583516324 0.005059632 sqh FBtr0339502|FBtr0339503|FBtr0070877|FBtr0339504|FBtr0345294 6223059|6223059|6223059|6223059|6223059 6223406|6223406|6223406|6223406|6223406 X - 6223232 6223290 3'utr sqh FlyBase G65057.1 TGGTTTCGCGCCTTCTGTTCTTTGATTCCTGATAATCCTGTACTTATCCGTGCATTTGA 34 6223252 0.743927985 11 31 313 0.921052632 1.544068044 0.263157895 0.117647059 0.210526316 34 3 0 35 X:6223232-6223290 7 sqh FBtr0345294|FBtr0070877|FBtr0339504|FBtr0339502|FBtr0339503 6223059|6223059|6223059|6223059|6223059 6223406|6223406|6223406|6223406|6223406 GTACTTA 7mer-m8 dme-miR-252-5p X - 6223197 6223299 3'utr sqh FlyBase G49024.1 TTTTTTTTTTGGTTTCGCGCCTTCTGTTCTTTGATTCCTGATAATCCTGTACTTATCCGTGCATTTGAATTAAACAAAAAGTAGCCAACACCAGCGATTGTTA 28 6223252 0.989476832 14 27 256 0.973684211 1.568201724 0.368421053 0.321428571 0.5 28 1 0 37 X:6223197-6223299 7 19.5 5142 FBgn0003514 2178.836667 260.73 395.3566667 0.00894973 0.074790013 0.049322553 1 1 1 0.1 dme-miR-999-3p 6mer3-8 AGTTAA X 622751 622756 + X_622751_622756_+ 0.998836516 0.99942209 0.999129303 0.000414082 mod(r) FBtr0089724|FBtr0335123|FBtr0335122|FBtr0089725|FBtr0089723|FBtr0089726 622627|622627|622627|622627|622627|622627 623051|623051|623051|623051|623051|623051 X + 622733 622779 3'utr mod(r) FlyBase G57775.1 AATGTTAGTAAATAGAGAAGTTAAGCCAGAGATGGGGCGACATAATC 81 622754 0.809606532 3 79 290 0.976744186 1.924279286 0.511627907 0.061728395 0.11627907 81 2 0 84 X:622733-622779 6 mod(r) FBtr0089723|FBtr0089726|FBtr0335122|FBtr0089725|FBtr0089724|FBtr0335123 622627|622627|622627|622627|622627|622627 623051|623051|623051|623051|623051|623051 AGTTAA 6mer3-8 dme-miR-999-3p X + 622738 622777 3'utr mod(r) FlyBase G43710.1 TAGTAAATAGAGAAGTTAAGCCAGAGATGGGGCGACATAA 43 622754 0.762791703 3 42 138 0.984375 1.799340549 0.625 0.348837209 0.5625 43 1 0 63 X:622738-622777 6 61 5143 FBgn0016038 99 9.14 14.07333333 0.616161616 6.673960613 4.334438655 -3 -3 -3 0.1 dme-bantam-3p 6mer2-7 GATCTC X 6231871 6231876 + X_6231871_6231876_+ 0.961034086 0.991781126 0.976407606 0.021741412 CG14446 FBtr0339696|FBtr0307164|FBtr0307165|FBtr0339697 6231056|6231056|6231056|6231317 6236218|6236004|6233166|6233166 X + 6231844 6231897 5'utr CG14446 FlyBase G59084.1 TATATATATATTTATATATATTCAGACGATCTCTGCCCGATCTTGCATATCCTA 109 6231877 0.850178525 8 101 811 0.94214876 1.579783597 0.421487603 0.091743119 0.181818182 109 5 2 114 X:6231844-6231897 6 CG14446 FBtr0339697|FBtr0307165|FBtr0307164|FBtr0339696 6231317|6231056|6231056|6231056 6233166|6233166|6236004|6236218 GATCTC 6mer2-7 dme-bantam-3p X + 6231831 6231923 5'utr CG14446 FlyBase G44701.1 GATTCAACTTTTCTATATATATATTTATATATATTCAGACGATCTCTGCCCGATCTTGCATATCCTATATCTTACTCTCTGTTGTGTCTGTGC 77 6231877 0.983505021 13 71 549 0.910891089 1.264817823 0.376237624 0.246753247 0.425742574 77 5 4 92 X:6231831-6231923 6 89 5144 FBgn0262730 931.1666667 14.78666667 22.41333333 0.095579023 6.018935978 3.970850684 -6 -6 -6 0.1 dme-miR-305-3p 8mer-m1 ATGTGCCG X 6232071 6232078 + X_6232071_6232078_+ 0.62850034 0.628735277 0.628617808 0.00016617 CG14446 FBtr0339696|FBtr0307164|FBtr0307165|FBtr0339697 6231056|6231056|6231056|6231317 6236218|6236004|6233166|6233166 X + 6232044 6232122 5'utr CG14446 FlyBase G59085.1 GTTAAGAGAAAGAGGAGAGTTTCCAAAATGTGCCGGGCACCGCTCCCAAAAGTCGCTAGAACTTAAAAACTGAATAATA 20 6232073 0.941481757 8 18 74 0.9 1.255272505 0.05 0 0 20 2 0 18 X:6232044-6232122 8 CG14446 FBtr0339697|FBtr0307165|FBtr0307164|FBtr0339696 6231317|6231056|6231056|6231056 6233166|6233166|6236004|6236218 ATGTGCCG 8mer-m1 dme-miR-305-3p X + 6232061 6232104 5'utr CG14446 FlyBase G44702.1 AGTTTCCAAAATGTGCCGGGCACCGCTCCCAAAAGTCGCTAGAA 8 6232072 0.917495496 3 6 22 0.888888889 0.903089987 0.111111111 0.125 0.222222222 8 1 0 8 X:6232061-6232104 8 9.5 5145 FBgn0262730 931.1666667 14.78666667 22.41333333 0.010202255 0.642470694 0.423854848 -2 -1 -1.5 0.1 dme-miR-1007-3p 7mer-m8 TGAGCTT X 6232393 6232399 + X_6232393_6232399_+ 0.603672834 0.605779817 0.604726325 0.001489874 CG14446 FBtr0339696|FBtr0307164|FBtr0307165|FBtr0339697 6231056|6231056|6231056|6231317 6236218|6236004|6233166|6233166 X + 6232366 6232430 5'utr CG14446 FlyBase G59087.1 AGATCACAAATAATATATAGACGCTTATGAGCTTTATTTGATCGATTGCATTGAAAAGGAAGCAG 54 6232393 0.781181534 7 51 419 0.956521739 1.51851394 0.420289855 0.240740741 0.405797101 54 2 1 66 X:6232366-6232430 7 CG14446 FBtr0339697|FBtr0307165|FBtr0307164|FBtr0339696 6231317|6231056|6231056|6231056 6233166|6233166|6236004|6236218 TGAGCTT 7mer-m8 dme-miR-1007-3p X + 6232373 6232445 5'utr CG14446 FlyBase G44703.1 AAATAATATATAGACGCTTATGAGCTTTATTTGATCGATTGCATTGAAAAGGAAGCAGCTAAAAGCAGAACAG 49 6232393 0.985362777 5 48 396 0.987951807 1.612783857 0.457831325 0.469387755 0.686746988 49 0 1 82 X:6232373-6232445 7 41 5146 FBgn0262730 931.1666667 14.78666667 22.41333333 0.044030786 2.77276826 1.829268293 0 0 0 0.1 dme-miR-277-3p 6mer3-8 TGCATT X 6233374 6233379 + X_6233374_6233379_+ 0.697601451 0.98040341 0.83900243 0.199971141 CG14446 FBtr0339696|FBtr0307164 6231056|6231056 6236218|6236004 X + 6233350 6233483 3'utr CG14446 FlyBase G59093.1 GAGGCCCACAATGAAGCGCACGAATGCATTGTTTGTAAACTAAATTTGTAGTCCTTGTCAGACGCTCGGACATCTAGTGCACTGTATACTGTACATAACGTGTTGAAAGTGCAGTGCGTTTCGCGGCCATAAGG 19 6233378 0.966626645 12 18 100 0.947368421 1.255272505 0.526315789 0 0 19 1 0 18 X:6233350-6233483 6 CG14446 FBtr0307164|FBtr0339696 6231056|6231056 6236004|6236218 TGCATT 6mer3-8 dme-miR-277-3p X + 6233357 6233383 3'utr CG14446 FlyBase G44708.1 ACAATGAAGCGCACGAATGCATTGTTT 5 6233378 0.580559079 3 5 23 1 0.903089987 0.375 0.4 0.625 5 0 0 8 X:6233357-6233383 6 6.5 5147 FBgn0262730 931.1666667 14.78666667 22.41333333 0.00698049 0.439585212 0.290005949 -4 -4 -4 0.1 dme-bantam-3p 6mer2-7 GATCTC X 6233535 6233540 + X_6233535_6233540_+ 0.999901873 0.999920289 0.999911081 1.30E-05 CG14446 FBtr0339696|FBtr0307164 6231056|6231056 6236218|6236004 X + 6233511 6233628 3'utr CG14446 FlyBase G59094.1 AGAGTCTTTGAATTAACTGAAATAGATCTCGACTTGGTCTTATAGCACGCAAACGCACTGTACCGTATTATTATACTTAGTCCTGAGTTGCTCCCTATCGATCTAAGGACTGCAAAGA 8 6233531 0.97316662 8 8 59 1 0.903089987 0 0 0 8 0 0 8 X:6233511-6233628 6 CG14446 FBtr0307164|FBtr0339696 6231056|6231056 6236004|6236218 GATCTC 6mer2-7 dme-bantam-3p X + 6233520 6233545 3'utr CG14446 FlyBase G44709.1 GAATTAACTGAAATAGATCTCGACTT 4 6233533 0.845280577 2 2 22 0.8 0.602059991 0 0.25 0.4 4 1 0 4 X:6233520-6233545 6 4 5148 FBgn0262730 931.1666667 14.78666667 22.41333333 0.004295686 0.270513977 0.178465199 4 2 3 0.1 dme-miR-34-5p 8mer-A1 CACTGCCA X 6233806 6233813 + X_6233806_6233813_+ 0.677553141 0.67732869 0.677440916 0.000158675 CG14446 FBtr0339696|FBtr0307164 6231056|6231056 6236218|6236004 X + 6233783 6234107 3'utr CG14446 FlyBase G59096.1 CACACACACTCTCAGTCGAGCTGCACTGCCATTGGTGAAAGTGAAAATGAGATTTAGGCCTATTGAAGCTTCCAGCATTTACCAGTGCCATAACTTTATAACTTTATATAACTTTACCCGCACGCCCAGCCCAGCCCAGTATGCCGATCAATCCGATCGATTGATCTCGGCTAGCATCGAGCTTAGCACTAGCTTTCTTCCGAGCTTGCTTGTTGGACAGACAGTGAGAACGAACGAAGAGACATCAGCCTCCATCCATTAAAGAACTTAGTCTTAGCCGATCTGGAGTCCAAAATTTCATTGGAAATTCCGCCATGCGGATCGG 125 6233814 0.97123952 35 119 742 0.95483871 1.86923172 0.367741935 0.2 0.35483871 125 6 1 148 X:6233783-6234107 8 CG14446 FBtr0307164|FBtr0339696 6231056|6231056 6236004|6236218 CACTGCCA 8mer-A1 dme-miR-34-5p X + 6233761 6233894 3'utr CG14446 FlyBase G44711.1 ATCGAAACATACACCAACACACCACACACACTCTCAGTCGAGCTGCACTGCCATTGGTGAAAGTGAAAATGAGATTTAGGCCTATTGAAGCTTCCAGCATTTACCAGTGCCATAACTTTATAACTTTATATAAC 44 6233814 0.971073238 12 42 245 0.948051948 1.86332286 0.480519481 0.454545455 0.688311688 44 4 0 73 X:6233761-6233894 8 34 5149 FBgn0262730 931.1666667 14.78666667 22.41333333 0.036513335 2.299368801 1.516954194 -8 -8 -8 0.1 dme-bantam-3p 7mer-m8 TGATCTC X 6233944 6233950 + X_6233944_6233950_+ 0.552612075 0.661524226 0.607068151 0.077012484 CG14446 FBtr0339696|FBtr0307164 6231056|6231056 6236218|6236004 X + 6233783 6234107 3'utr CG14446 FlyBase G59096.1 CACACACACTCTCAGTCGAGCTGCACTGCCATTGGTGAAAGTGAAAATGAGATTTAGGCCTATTGAAGCTTCCAGCATTTACCAGTGCCATAACTTTATAACTTTATATAACTTTACCCGCACGCCCAGCCCAGCCCAGTATGCCGATCAATCCGATCGATTGATCTCGGCTAGCATCGAGCTTAGCACTAGCTTTCTTCCGAGCTTGCTTGTTGGACAGACAGTGAGAACGAACGAAGAGACATCAGCCTCCATCCATTAAAGAACTTAGTCTTAGCCGATCTGGAGTCCAAAATTTCATTGGAAATTCCGCCATGCGGATCGG 125 6233943 0.97123952 35 119 742 0.95483871 1.86923172 0.367741935 0.2 0.35483871 125 6 1 148 X:6233783-6234107 7 CG14446 FBtr0307164|FBtr0339696 6231056|6231056 6236004|6236218 TGATCTC 7mer-m8 dme-bantam-3p X + 6233914 6233971 3'utr CG14446 FlyBase G44712.1 CAGCCCAGTATGCCGATCAATCCGATCGATTGATCTCGGCTAGCATCGAGCTTAGCAC 29 6233943 0.97203118 4 24 144 0.909090909 1 0.227272727 0.344827586 0.568181818 29 1 3 40 X:6233914-6233971 7 21 5150 FBgn0262730 931.1666667 14.78666667 22.41333333 0.022552354 1.420198377 0.936942296 1 1 1 0.1 dme-miR-33-5p 8mer-A1 CAATGCAA X 6234242 6234249 + X_6234242_6234249_+ 0.634290079 0.632228487 0.633259283 0.001457771 CG14446 FBtr0339696|FBtr0307164 6231056|6231056 6236218|6236004 X + 6234131 6234266 3'utr CG14446 FlyBase G59097.1 GGCGTGAGGCGATTGATGACTATTAGCATTTTTAATCTAGACAAATGCTTGGCTTCAATTCGCGGATCGGCTTAATCCTTCTTGTACTTGTATGTATGTGTTTAACGATTCCAATGCAAAGACTTTTATATATCTT 66 6234256 0.985656986 16 62 513 0.949367089 1.875061263 0.151898734 0.151515152 0.291139241 66 4 0 75 X:6234131-6234266 8 CG14446 FBtr0307164|FBtr0339696 6231056|6231056 6236004|6236218 CAATGCAA 8mer-A1 dme-miR-33-5p X + 6234179 6234274 3'utr CG14446 FlyBase G44713.1 TTGGCTTCAATTCGCGGATCGGCTTAATCCTTCTTGTACTTGTATGTATGTGTTTAACGATTCCAATGCAAAGACTTTTATATATCTTTTTTTTTT 62 6234256 0.744168607 13 58 510 0.951807229 1.420505837 0.072289157 0.290322581 0.469879518 62 2 2 79 X:6234179-6234274 8 46 5151 FBgn0262730 931.1666667 14.78666667 22.41333333 0.049400394 3.11091073 2.052349792 -14 -14 -14 0.1 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 6234381 6234388 + X_6234381_6234388_+ 0.63113665 0.63113665 0.63113665 0 CG14446 FBtr0339696|FBtr0307164 6231056|6231056 6236218|6236004 X + 6234332 6234424 3'utr CG14446 FlyBase G59098.1 TATTGTTTAGCATGTTTCGACTGCAATTTAAGCCGAATTTTAGATCTTCTCTAGTCAGTTCAAAGCGTTTTTTGTTCGTTTTGTCACGCCCAT 71 6234380 0.986109137 16 62 598 0.894117647 1.579783597 0.164705882 0.183098592 0.317647059 71 8 1 76 X:6234332-6234424 8 CG14446 FBtr0307164|FBtr0339696 6231056|6231056 6236004|6236218 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X + 6234328 6234400 3'utr CG14446 FlyBase G44714.1 ACATTATTGTTTAGCATGTTTCGACTGCAATTTAAGCCGAATTTTAGATCTTCTCTAGTCAGTTCAAAGCGTT 47 6234380 0.989183898 12 41 394 0.904109589 1.217483944 0.191780822 0.446808511 0.643835616 47 4 3 66 X:6234328-6234400 8 53 5152 FBgn0262730 931.1666667 14.78666667 22.41333333 0.056917845 3.584310189 2.364663891 1 1 1 0.1 dme-miR-1008-3p 6mer3-8 AGCTGT X 6234539 6234544 + X_6234539_6234544_+ 0.999890955 0.947634907 0.973762931 0.036950643 CG14446 FBtr0339696|FBtr0307164 6231056|6231056 6236218|6236004 X + 6234513 6234557 3'utr CG14446 FlyBase G59099.1 CTGCCACGCCCCCGCCCCTAAACCTAAGCTGTATGTACTTGTATG 11 6234531 0.898269003 2 10 34 0.909090909 1 0.272727273 0 0 11 1 0 10 X:6234513-6234557 6 CG14446 FBtr0307164|FBtr0339696 6231056|6231056 6236004|6236218 AGCTGT 6mer3-8 dme-miR-1008-3p X + 6234525 6234558 3'utr CG14446 FlyBase G44716.1 CGCCCCTAAACCTAAGCTGTATGTACTTGTATGT 7 6234546 0.982149164 2 6 55 0.818181818 0.954242509 0.363636364 0.571428571 0.727272727 7 2 0 9 X:6234525-6234558 6 6 5153 FBgn0262730 931.1666667 14.78666667 22.41333333 0.00644353 0.405770965 0.267697799 8 -7 0.5 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA X 6240861 6240866 - X_6240861_6240866_- 0.877377635 0.995288163 0.936332899 0.083375385 Rbcn-3A FBtr0303341 6240743 6241463 X - 6240836 6240885 3'utr Rbcn-3A FlyBase G65066.1 TGTCTTTATGTTGAGCTTTGTGCAAAAATTTGTCTGTTGTTGAATCAATC 18 6240868 0.984502225 5 18 152 1 1.361727836 0.260869565 0.277777778 0.434782609 18 0 0 23 X:6240836-6240885 6 Rbcn-3A FBtr0303341 6240743 6241463 GTGCAA 6mer3-8 dme-miR-92b-3p X - 6240812 6240885 3'utr Rbcn-3A FlyBase G49033.1 TGTCTTTATGTTGAGCTTTGTGCAAAAATTTGTCTGTTGTTGAATCAATCAAGATATATGTATACCTAAAACGA 23 6240868 0.986006175 9 22 188 1 1.531478917 0.205882353 0.434782609 0.617647059 23 0 0 34 X:6240812-6240885 6 19 5154 FBgn0023458 2065.706667 22.39 34.44 0.009197821 0.848593122 0.551684088 2 2 2 0.1 dme-miR-305-5p 7mer-A1 GTACAAA X 6274987 6274993 - X_6274987_6274993_- 0.782906855 0.782887053 0.782896954 1.40E-05 CG3566 FBtr0305177|FBtr0089869|FBtr0089870 6274970|6274970|6274970 6275335|6276223|6275082 X - 6274975 6275005 3'utr CG3566 FlyBase G65122.1 ACGAAATAAATTGTACAAATTGCTTAAATTA 30 6274995 0.717764319 4 30 173 1 1.653212514 0.533333333 0.366666667 0.577777778 30 0 0 45 X:6274975-6275005 7 CG3566 FBtr0089869|FBtr0089870|FBtr0305177 6274970|6274970|6274970 6276223|6275082|6275335 GTACAAA 7mer-A1 dme-miR-305-5p X - 6274976 6275010 3'utr CG3566 FlyBase G49066.1 TTGACACGAAATAAATTGTACAAATTGCTTAAATT 16 6274995 0.731151875 3 16 87 1 1.255272505 0.277777778 0.125 0.222222222 16 0 0 18 X:6274976-6275010 7 22.5 5155 FBgn0029854 227.9933333 32.42666667 49.59666667 0.098687096 0.693873355 0.45365952 2 2 2 0.1 dme-bantam-3p 7mer-m8 TGATCTC X 6276109 6276115 - X_6276109_6276115_- 0.661615243 0.661561327 0.661588285 3.81E-05 CG3566 FBtr0089869 6274970 6276223 X - 6276095 6276135 3'utr CG3566 FlyBase G65126.1 TTCTCCGCTCCCACACGGATTGATCTCCTTATCTCGCTAGA 13 6276107 0.693798181 2 13 88 1 1.113943352 0 0 0 13 0 0 13 X:6276095-6276135 7 CG3566 FBtr0089869 6274970 6276223 TGATCTC 7mer-m8 dme-bantam-3p X - 6276096 6276130 3'utr CG3566 FlyBase G49070.1 CGCTCCCACACGGATTGATCTCCTTATCTCGCTAG 5 6276116 0.867292799 2 5 34 1 0.954242509 0 0.6 0.777777778 5 0 0 9 X:6276096-6276130 7 9 5156 FBgn0029854 227.9933333 32.42666667 49.59666667 0.039474838 0.277549342 0.181463808 -8 1 -3.5 0.1 dme-miR-980-3p 8mer-A1 GGCAGCTA X 6298611 6298618 + X_6298611_6298618_+ 0.668591504 0.66866402 0.668627762 5.13E-05 CG3815 FBtr0070899 6298491 6298970 X + 6298545 6298695 3'utr CG3815 FlyBase G59160.1 AAGACACAGAAACATATACGCGCTCAACCGCAGCCAACTCCAGTGGAGCAGCACCAATCTCAGTGGGGCAGCTAGCAGCCAGGCATAGGGTTAGGGTTAGCAGATACCAGTTCAACTTCATCGCATCAATCATCGCAATGCAAAGCCTCGG 86 6298608 0.896491981 10 82 265 0.959183673 1.496006599 0.397959184 0.127906977 0.234693878 86 2 2 94 X:6298545-6298695 8 CG3815 FBtr0070899 6298491 6298970 GGCAGCTA 8mer-A1 dme-miR-980-3p X + 6298545 6298703 3'utr CG3815 FlyBase G44756.1 AAGACACAGAAACATATACGCGCTCAACCGCAGCCAACTCCAGTGGAGCAGCACCAATCTCAGTGGGGCAGCTAGCAGCCAGGCATAGGGTTAGGGTTAGCAGATACCAGTTCAACTTCATCGCATCAATCATCGCAATGCAAAGCCTCGGCAGTACTT 56 6298608 0.998818654 8 53 170 0.957894737 1.959041392 0.378947368 0.535714286 0.726315789 56 4 0 91 X:6298545-6298703 8 43 5157 FBgn0029861 300.3333333 11.21333333 17.14666667 0.143174251 3.834720571 2.50777605 3 3 3 0.1 dme-miR-252-5p 7mer-m8 GTACTTA X 6299191 6299197 - X_6299191_6299197_- 0.588272247 0.588266785 0.588269516 3.82E-06 CG12219 FBtr0070925 6299052 6299296 X - 6299167 6299219 3'utr CG12219 FlyBase G65165.1 TTGCATATTAGCCATACCGAATGTACTTATCCGACGTTTCGTGTACTCCACAA 80 6299198 0.871310806 3 79 523 0.989473684 1.973127854 0.010526316 0.1625 0.294736842 80 1 0 94 X:6299167-6299219 7 CG12219 FBtr0070925 6299052 6299296 GTACTTA 7mer-m8 dme-miR-252-5p X - 6299101 6299219 3'utr CG12219 FlyBase G49094.1 TTGCATATTAGCCATACCGAATGTACTTATCCGACGTTTCGTGTACTCCACAAAGTCAAGGCGTCCCGCCGCCTGGCACCTATTGTGTATACTCTTCTCGTTCTCTATAATGCCTTAAC 64 6299198 0.978817854 8 64 431 1 1.968482949 0.032258065 0.359375 0.559139785 64 0 0 93 X:6299101-6299219 7 69 5158 FBgn0043796 206.3333333 12.49333333 19.20666667 0.334410339 5.522945571 3.592502603 1 1 1 0.1 dme-miR-308-3p 8mer-m1 CTGTGATT X 633704 633711 - X_633704_633711_- 0.38556063 0.385560616 0.385560623 0 Dredd FBtr0114561 633620 634524 X - 633651 633731 stop_codon Dredd FlyBase G63872.1 ACGTGTACTTTCCACCTCGTCTGTGATTTTGGTTTTTAACGTTAGCGCAGTTGTACGTCCACTCAAATTGCTCTATAAAGG 32 633704 0.991231728 6 28 296 0.9 1.556302501 0.075 0.21875 0.375 32 4 0 36 X:633651-633731 8 Dredd FBtr0114561 633620 634524 CTGTGATT 8mer-m1 dme-miR-308-3p X - 633657 633747 stop_codon Dredd FlyBase G48146.1 AGCACATTTCGCCAGCACGTGTACTTTCCACCTCGTCTGTGATTTTGGTTTTTAACGTTAGCGCAGTTGTACGTCCACTCAAATTGCTCTA 27 633704 0.991268941 10 25 269 0.906976744 1.591064607 0.023255814 0.407407407 0.627906977 27 4 0 39 X:633657-633747 8 23.5 5159 FBgn0020381 93.66666667 6.923333333 10.50666667 0.25088968 3.394318729 2.236675127 -7 -7 -7 0.1 dme-miR-2a-2-5p 7mer-A1 GATGAGA X 6360521 6360527 + X_6360521_6360527_+ 0.736076717 0.782906998 0.759491858 0.033114023 kdn FBtr0070906|FBtr0070907 6360362|6360362 6361323|6361323 X + 6360359 6360534 stop_codon kdn FlyBase G59186.1 AGTAAGCAACTGGAGCAGGAGGAGCGGGAGGAGCTGGAGTTCAACCTTTTGTAGCCGGAGGACGATGGACGTAAAATGCAGAAGCTGTAGATTGTAATTGACGAGGGAAGAGGCAGAAAGAGAGAGATAGAGAGAGAGAGAGAATCGATCGGATTGGATTAGGATGAGATGGGATT 137 6360506 0.963931241 21 117 590 0.872483221 1 0.268456376 0.065693431 0.140939597 137 7 12 130 X:6360359-6360534 7 kdn FBtr0070906|FBtr0070907 6360362|6360362 6361323|6361323 GATGAGA 7mer-A1 dme-miR-2a-2-5p X + 6360478 6360593 3'utr kdn FlyBase G44780.1 GAGAGAGATAGAGAGAGAGAGAGAATCGATCGGATTGGATTAGGATGAGATGGGATTGGATTGGATGGATATCGATATGACGACGCTGATATTGAGGGAGTTGGAGATGTGTAGTT 45 6360506 0.719447958 14 35 223 0.811594203 1.049218023 0.47826087 0.333333333 0.565217391 45 9 4 56 X:6360478-6360593 7 18 5160 FBgn0261955 413.3133333 20.16333333 31.04333333 0.043550494 0.892709539 0.57983464 15 15 15 0.1 dme-miR-1012-3p 7mer-m8 TTGACTA X 6360818 6360824 + X_6360818_6360824_+ 0.631523807 0.631525999 0.631524903 1.56E-06 kdn FBtr0070906|FBtr0070907 6360362|6360362 6361323|6361323 X + 6360804 6360852 3'utr kdn FlyBase G59187.1 ATATATATATACGATTGACTATATATATAGGGACAGGCAGAGAGAGTAA 12 6360827 0.958975385 5 11 61 1 1.146128036 0.357142857 0.166666667 0.285714286 12 0 0 14 X:6360804-6360852 7 kdn FBtr0070906|FBtr0070907 6360362|6360362 6361323|6361323 TTGACTA 7mer-m8 dme-miR-1012-3p X + 6360802 6360865 3'utr kdn FlyBase G44782.1 ATATATATATATACGATTGACTATATATATAGGGACAGGCAGAGAGAGTAAAATGTTTGCGCCT 6 6360819 0.989375842 3 3 39 0.75 0.77815125 0.25 0.166666667 0.375 6 2 0 6 X:6360802-6360865 7 5.5 5161 FBgn0261955 413.3133333 20.16333333 31.04333333 0.013307096 0.272772359 0.177171695 -9 -1 -5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 6371106 6371111 - X_6371106_6371111_- 0.999998373 0.999998984 0.999998679 4.24E-07 PpV FBtr0070921|FBtr0070921|FBtr0070921|FBtr0331430|FBtr0331430|FBtr0331430|FBtr0331431|FBtr0331431|FBtr0331431|FBtr0331432|FBtr0331432|FBtr0331432 6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063 6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728 X - 6371096 6371127 3'utr PpV FlyBase G65179.1 AAGAATAACCCAATTGTGTGATCCCGATCAAA 12 6371114 0.78320391 2 12 66 1 1.079181246 0.25 0 0 12 0 0 12 X:6371096-6371127 6 PpV FBtr0331431|FBtr0331431|FBtr0331431|FBtr0331432|FBtr0331432|FBtr0331432|FBtr0070921|FBtr0070921|FBtr0070921|FBtr0331430|FBtr0331430|FBtr0331430 6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063 6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 6371085 6371125 3'utr PpV FlyBase G49105.1 GAATAACCCAATTGTGTGATCCCGATCAAAACGATATGATT 10 6371113 0.967605388 3 10 54 1 1.041392685 0.181818182 0.1 0.181818182 10 0 0 11 X:6371085-6371125 6 11 5162 FBgn0003139 501.9866667 38.39333333 58.97333333 0.021912933 0.286508074 0.186524983 3 2 2.5 0.1 dme-bantam-3p 6mer3-8 TGATCT X 643393 643398 + X_643393_643398_+ 0.999880278 0.999847335 0.999863806 2.33E-05 su(s) FBtr0340081|FBtr0340082|FBtr0070120 643340|643340|643340 643760|643760|643760 X + 643365 643458 3'utr su(s) FlyBase G57810.1 AAACGCAAAAGGAGCCCTTTTGCCCCAATGATCTTAAAGCGATGCTATGCCACATGACCCTTTCCCCCAACCATACCATACGTCGTGGAAAACT 434 643393 0.984289076 11 427 2834 0.980582524 2.703291378 0.440776699 0.156682028 0.289320388 434 10 0 505 X:643365-643458 6 su(s) FBtr0070120|FBtr0340082|FBtr0340081 643340|643340|643340 643760|643760|643760 TGATCT 6mer3-8 dme-bantam-3p X + 643365 643439 3'utr su(s) FlyBase G43734.1 AAACGCAAAAGGAGCCCTTTTGCCCCAATGATCTTAAAGCGATGCTATGCCACATGACCCTTTCCCCCAACCATA 246 643393 0.971579978 9 243 1535 0.988603989 2.540329475 0.49002849 0.321138211 0.524216524 246 4 0 347 X:643365-643439 6 333 5163 FBgn0003575 432.3133333 10.81666667 16.53666667 0.770274646 30.78582435 20.13706914 0 0 0 0.1 dme-miR-970-3p 6mer3-8 TCTTAT X 643567 643572 + X_643567_643572_+ 0.999960612 0.999991184 0.999975898 2.16E-05 su(s) FBtr0340081|FBtr0340082|FBtr0070120 643340|643340|643340 643760|643760|643760 X + 643552 643581 3'utr su(s) FlyBase G57812.1 CGCTAGGTGTAAGGATCTTATTAGCTATAC 5 643572 0.644613676 3 5 34 1 0.698970004 0 0 0 5 0 0 5 X:643552-643581 6 su(s) FBtr0070120|FBtr0340082|FBtr0340081 643340|643340|643340 643760|643760|643760 TCTTAT 6mer3-8 dme-miR-970-3p X + 643522 643582 3'utr su(s) FlyBase G43736.1 CCGAATCCCCATTATTGTCACTATTTTTTTCGCTAGGTGTAAGGATCTTATTAGCTATACG 8 643570 0.985374383 6 7 59 1 1.079181246 0.25 0.375 0.583333333 8 0 0 12 X:643522-643582 6 5.5 5164 FBgn0003575 432.3133333 10.81666667 16.53666667 0.012722254 0.508474576 0.332594235 -5 -3 -4 0.1 dme-miR-252-5p 6mer3-8 GTACTT X 646315 646320 + X_646315_646320_+ 0.886640723 0.999867617 0.94325417 0.080063509 CG13367 FBtr0070121 646197 646386 X + 646253 646375 3'utr CG13367 FlyBase G57822.1 ATTTATTGCAACTTTTACTCTTCGTAAACGGGCTACTTGCCGAACAGAAAATAATTCAAAAAGTACTTGATGTACTGTAGTACCAACTGAACTCAATCAGCAATTAATGAATAAAATACAATT 21 646327 0.96526471 13 21 138 1 1.361727836 0.217391304 0.095238095 0.173913043 21 0 0 23 X:646253-646375 6 CG13367 FBtr0070121 646197 646386 GTACTT 6mer3-8 dme-miR-252-5p X + 646290 646376 3'utr CG13367 FlyBase G43742.1 TGCCGAACAGAAAATAATTCAAAAAGTACTTGATGTACTGTAGTACCAACTGAACTCAATCAGCAATTAATGAATAAAATACAATTT 20 646340 0.974864306 9 20 122 1 1.51851394 0.272727273 0.45 0.666666667 20 0 0 33 X:646290-646376 6 5 5165 FBgn0025634 131.6666667 10.53666667 16.25 0.037974684 0.474533376 0.307692308 -12 -25 -18.5 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT X 648538 648544 + X_648538_648544_+ 0.658767499 0.645990473 0.652378986 0.009034703 Roc1a FBtr0308651|FBtr0343564 647922|647922 648597|648597 X + 648504 648549 3'utr Roc1a FlyBase G57827.1 TCTTTTTAGTTTATTATGAATGTTTTGCGGCCGCGGCAGCTTAGAA 5 648545 0.931073291 3 4 26 1 0.77815125 0 0.2 0.333333333 5 0 0 6 X:648504-648549 7 Roc1a FBtr0308651|FBtr0343564 647922|647922 648597|648597 GGCAGCT 7mer-m8 dme-miR-980-3p X + 648525 648551 3'utr Roc1a FlyBase G43748.1 GTTTTGCGGCCGCGGCAGCTTAGAAAA 5 648545 0.664585583 2 4 12 1 0.84509804 0 0.4 0.571428571 5 0 0 7 X:648525-648551 7 4 5166 FBgn0025638 301.6933333 54.65333333 83.83333333 0.013258496 0.073188583 0.047713718 -7 -7 -7 0.1 dme-miR-79-3p 8mer-A1 TAGCTTTA X 649248 649255 - X_649248_649255_- 0.625360025 0.625360689 0.625360357 4.95E-07 Hmt4-20 FBtr0070151|FBtr0308652 648481|648889 650049|650049 X - 649224 649267 5'utr Hmt4-20 FlyBase G63878.1 CGAAACCCAACTTAGCTTTACACCAAGCAAGCCCCTCTGTTTGT 14 649256 0.954141693 2 12 55 0.888888889 1.204119983 0.166666667 0.214285714 0.388888889 14 2 0 16 X:649224-649267 8 Hmt4-20 FBtr0308652|FBtr0070151 648889|648481 650049|650049 TAGCTTTA 8mer-A1 dme-miR-79-3p X - 649206 649281 5'utr Hmt4-20 FlyBase G48150.1 AGACGCCTTGCATCCGAAACCCAACTTAGCTTTACACCAAGCAAGCCCCTCTGTTTGTTGCAAGATAATGAAACAA 8 649256 0.981180479 3 6 44 0.818181818 0.653212514 0.181818182 0.375 0.545454545 8 1 1 9 X:649206-649281 8 8.5 5167 FBgn0025639 495.87 9.743333333 14.96 0.01714159 0.872391379 0.568181818 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 649666 649671 - X_649666_649671_- 0.999999387 0.999999761 0.999999574 2.83E-07 Hmt4-20 FBtr0070151|FBtr0070151|FBtr0070151|FBtr0308652|FBtr0308652|FBtr0308652 648481|648481|648481|648889|648889|648889 650049|650049|650049|650049|650049|650049 X - 649646 649688 5'utr Hmt4-20 FlyBase G63879.1 ATTTCTCTCTTTCTCTTTGTGATCACTTCCCGTTTCTCCCAAC 29 649672 0.728207661 4 25 348 0.909090909 1.176091259 0 0.137931034 0.242424242 29 2 1 30 X:649646-649688 6 Hmt4-20 FBtr0308652|FBtr0308652|FBtr0308652|FBtr0070151|FBtr0070151|FBtr0070151 648889|648889|648889|648481|648481|648481 650049|650049|650049|650049|650049|650049 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 649647 649683 5'utr Hmt4-20 FlyBase G48151.1 TCTCTTTCTCTTTGTGATCACTTCCCGTTTCTCCCAA 8 649672 0.671721366 4 6 95 0.8 0.903089987 0 0.125 0.3 8 2 0 8 X:649647-649683 6 17 5168 FBgn0025639 495.87 9.743333333 14.96 0.034283179 1.744782757 1.136363636 1 1 1 0.1 dme-bantam-3p 7mer-m8 TGATCTC X 650035 650041 - X_650035_650041_- 0.661601119 0.661603913 0.661602516 1.98E-06 Hmt4-20 FBtr0070151|FBtr0308652 648481|648889 650049|650049 X - 649885 650065 stop_codon Hmt4-20 FlyBase G63880.2 TCACGGCCAGAAATAACCAACGACTGATCTCCAAGCAAATTGACTAAGCACAGTTGCCATTTCCATGAGAAGAGGAGGAGCGCGTAGGGGGAGAGTACCGGGCGAGGACATGGTGAAGCACCAGGTGCAGAGAAGCAGGAATAACAAGGGATGGAGACTGAGAATGGCTGCGCTGCTGGCG 112 650041 0.931338677 12 102 317 0.947368421 1.799340549 0.07518797 0.151785714 0.285714286 112 6 1 126 X:649885-650065 7 Hmt4-20 FBtr0308652|FBtr0070151 648889|648481 650049|650049 TGATCTC 7mer-m8 dme-bantam-3p X - 649971 650063 stop_codon Hmt4-20 FlyBase G48153.1 ACGGCCAGAAATAACCAACGACTGATCTCCAAGCAAATTGACTAAGCACAGTTGCCATTTCCATGAGAAGAGGAGGAGCGCGTAGGGGGAGAG 78 650041 0.847298196 9 70 228 0.860869565 1.694605199 0.060869565 0.333333333 0.547826087 78 15 1 99 X:649971-650063 7 74 5169 FBgn0025639 495.87 9.743333333 14.96 0.149232662 7.594936709 4.946524064 0 0 0 0.1 dme-miR-2a-2-5p 6mer2-7 GATGAG X 6530957 6530962 - X_6530957_6530962_- 0.999665967 1 0.999832984 0.000236174 RpL7A FBtr0343329 6530895 6531125 X - 6530933 6530985 3'utr RpL7A FlyBase G65191.1 AAGTGCCTGTGAGAGTGCTTTTGGATGAGTCGATGATTTGGCGTCGGCTTGGA 8 6530966 0.987310221 5 7 56 0.888888889 0.903089987 0.222222222 0.125 0.222222222 8 1 0 8 X:6530933-6530985 6 RpL7A FBtr0343329 6530895 6531125 GATGAG 6mer2-7 dme-miR-2a-2-5p X - 6530924 6530985 3'utr RpL7A FlyBase G49115.1 AAGTGCCTGTGAGAGTGCTTTTGGATGAGTCGATGATTTGGCGTCGGCTTGGATTCAATAAA 11 6530965 0.657050249 8 11 83 1 1.176091259 0.2 0.363636364 0.533333333 11 0 0 15 X:6530924-6530985 6 7.5 5170 FBgn0014026 13933.55333 1778.546667 2702.97 0.000538269 0.004216926 0.002774726 4 3 3.5 0.1 dme-miR-1006-3p 6mer2-7 GAATTT X 6531042 6531047 - X_6531042_6531047_- 0.996144833 0.995089345 0.995617089 0.000746351 RpL7A FBtr0343329 6530895 6531125 X - 6531015 6531299 stop_codon RpL7A FlyBase G65192.1 AACGACAAGGCCAACTTCGGCAAGGTCCTGGAGGCTGTGAAGACCAACTTCAACGAGCGCCACGAGGAGATCCGTCGCCACTGGGGCGGTGGTATCCTTGGCTCCAAGAGTCTGGCCCGCATCTCTAAGCTGGAGCGCGCCAAGGCACGCGAGCTTGCCCAGAAGCAGGGTTGATTCAATCTGAAGCCGGTCCGGTCCGATGGTGGAGACTTTTAAGTACACATGGATGAAATTAGTTGGGCCATGCTCACTGAATTTGATAACTAATAAACTTTTAAGTGTACA 1612 6531048 0.889814948 50 1575 11302 0.977074236 2.553883027 0.258187773 0.119727047 0.225436681 1612 38 4 1790 X:6531015-6531299 6 RpL7A FBtr0343329 6530895 6531125 GAATTT 6mer2-7 dme-miR-1006-3p X - 6531018 6531233 stop_codon RpL7A FlyBase G49116.1 GAGATCCGTCGCCACTGGGGCGGTGGTATCCTTGGCTCCAAGAGTCTGGCCCGCATCTCTAAGCTGGAGCGCGCCAAGGCACGCGAGCTTGCCCAGAAGCAGGGTTGATTCAATCTGAAGCCGGTCCGGTCCGATGGTGGAGACTTTTAAGTACACATGGATGAAATTAGTTGGGCCATGCTCACTGAATTTGATAACTAATAAACTTTTAAGTGT 649 6531048 0.837341731 40 635 4891 0.980827447 2.51054501 0.27346115 0.363636364 0.583249243 649 17 2 972 X:6531018-6531233 6 761.5 5171 FBgn0014026 13933.55333 1778.546667 2702.97 0.054652247 0.428158571 0.281727137 1 1 1 0.1 dme-miR-7-5p 7mer-A1 TCTTCCA X 6537461 6537467 + X_6537461_6537467_+ 0.8233495 0.823349395 0.823349448 7.07E-08 dx FBtr0070914 6537377 6538575 X + 6537437 6537546 3'utr dx FlyBase G59218.1 CCACCGAAGTCCCCTCGATCATTCTCTTCCATTCGTCGTTAAGTTACTTTCTACATAATCTCAGTGTGTGTGCAATCCTCGTTTACTATGATATATTTTTTTTATAGATA 147 6537458 0.79244303 21 133 1425 0.901734104 1.716003344 0.248554913 0.136054422 0.265895954 147 15 2 156 X:6537437-6537546 7 dx FBtr0070914 6537377 6538575 TCTTCCA 7mer-A1 dme-miR-7-5p X + 6537441 6537534 3'utr dx FlyBase G44802.1 CGAAGTCCCCTCGATCATTCTCTTCCATTCGTCGTTAAGTTACTTTCTACATAATCTCAGTGTGTGTGCAATCCTCGTTTACTATGATATATTT 52 6537458 0.765246965 11 44 499 0.864864865 1.204119983 0.135135135 0.307692308 0.513513514 52 7 3 64 X:6537441-6537534 7 43.5 5172 FBgn0000524 299.9366667 9.43 14.42 0.145030618 4.612937434 3.016643551 3 3 3 0.1 dme-miR-79-3p 6mer3-8 TAGCTT X 6537608 6537613 + X_6537608_6537613_+ 0.712404011 0.860750261 0.786577136 0.104896675 dx FBtr0070914 6537377 6538575 X + 6537583 6537635 3'utr dx FlyBase G59219.1 CAACAGCAAACCACAATTGCAATTGTAGCTTCCTTTCCGCTCTTCCAATTCGT 22 6537601 0.983738085 9 22 171 1 1.447158031 0 0.272727273 0.428571429 22 0 0 28 X:6537583-6537635 6 dx FBtr0070914 6537377 6538575 TAGCTT 6mer3-8 dme-miR-79-3p X + 6537588 6537641 3'utr dx FlyBase G44804.1 GCAAACCACAATTGCAATTGTAGCTTCCTTTCCGCTCTTCCAATTCGTATTTGT 12 6537616 0.942894823 9 11 97 0.95 1.278753601 0 0.583333333 0.75 12 1 0 19 X:6537588-6537641 6 14.5 5173 FBgn0000524 299.9366667 9.43 14.42 0.048343539 1.537645811 1.00554785 7 -8 -0.5 0.1 dme-miR-1008-3p 6mer3-8 AGCTGT X 6537707 6537712 + X_6537707_6537712_+ 0.96612587 0.811342064 0.888733967 0.109448675 dx FBtr0070914 6537377 6538575 X + 6537658 6537803 3'utr dx FlyBase G59220.1 AGTTGGCGTACATCATATGTATTAGCTAGTTAGTTAGTTAGTTAGTTGTAGCTGTAGTTCCCAAGAGAATCTTGACCCAAGACACCTACTAGTATTAGGCATTATCCTGATTCTTGATTCCTGATTCGATTCAAGCCAAGCCAAGC 43 6537710 0.985747065 20 40 339 0.892857143 1.698970004 0.232142857 0.209302326 0.392857143 43 6 0 50 X:6537658-6537803 6 dx FBtr0070914 6537377 6538575 AGCTGT 6mer3-8 dme-miR-1008-3p X + 6537657 6537789 3'utr dx FlyBase G44805.1 AAGTTGGCGTACATCATATGTATTAGCTAGTTAGTTAGTTAGTTAGTTGTAGCTGTAGTTCCCAAGAGAATCTTGACCCAAGACACCTACTAGTATTAGGCATTATCCTGATTCTTGATTCCTGATTCGATTC 37 6537729 0.796674776 22 37 325 1 1.770852012 0.084745763 0.432432432 0.644067797 37 0 0 59 X:6537657-6537789 6 14.5 5174 FBgn0000524 299.9366667 9.43 14.42 0.048343539 1.537645811 1.00554785 -3 -22 -12.5 0.1 dme-miR-8-3p 7mer-A1 AGTATTA X 6537748 6537754 + X_6537748_6537754_+ 0.767542782 0.822966948 0.795254865 0.039190757 dx FBtr0070914 6537377 6538575 X + 6537658 6537803 3'utr dx FlyBase G59220.1 AGTTGGCGTACATCATATGTATTAGCTAGTTAGTTAGTTAGTTAGTTGTAGCTGTAGTTCCCAAGAGAATCTTGACCCAAGACACCTACTAGTATTAGGCATTATCCTGATTCTTGATTCCTGATTCGATTCAAGCCAAGCCAAGC 43 6537747 0.985747065 20 40 339 0.892857143 1.698970004 0.232142857 0.209302326 0.392857143 43 6 0 50 X:6537658-6537803 7 dx FBtr0070914 6537377 6538575 AGTATTA 7mer-A1 dme-miR-8-3p X + 6537657 6537789 3'utr dx FlyBase G44805.1 AAGTTGGCGTACATCATATGTATTAGCTAGTTAGTTAGTTAGTTAGTTGTAGCTGTAGTTCCCAAGAGAATCTTGACCCAAGACACCTACTAGTATTAGGCATTATCCTGATTCTTGATTCCTGATTCGATTC 37 6537729 0.796674776 22 37 325 1 1.770852012 0.084745763 0.432432432 0.644067797 37 0 0 59 X:6537657-6537789 7 11 5175 FBgn0000524 299.9366667 9.43 14.42 0.036674409 1.166489926 0.762829404 1 19 10 0.1 dme-miR-283-5p 6mer3-8 TGATAT X 6537869 6537874 + X_6537869_6537874_+ 0.996014261 0.973650693 0.984832477 0.015813453 dx FBtr0070914 6537377 6538575 X + 6537820 6537887 3'utr dx FlyBase G59221.1 AAGCTGTGCCAAAATCGTAGCGCTCCCGTTTATAGGATATGTATATTGTTGATATAGCTAGCTATAAC 39 6537865 0.992106411 8 35 381 0.9 1.556302501 0.275 0.025641026 0.05 39 4 0 36 X:6537820-6537887 6 dx FBtr0070914 6537377 6538575 TGATAT 6mer3-8 dme-miR-283-5p X + 6537847 6537912 3'utr dx FlyBase G44806.1 GTTTATAGGATATGTATATTGTTGATATAGCTAGCTATAACCATTGCCCATCTCTCCATCTCTCTC 25 6537865 0.749693173 5 22 250 0.914893617 1.156347201 0.170212766 0.52 0.744680851 25 2 2 43 X:6537847-6537912 6 27.5 5176 FBgn0000524 299.9366667 9.43 14.42 0.091686023 2.916224814 1.907073509 4 4 4 0.1 dme-miR-995-5p 6mer3-8 AATTCG X 6538015 6538020 + X_6538015_6538020_+ 0.807737941 0.806526594 0.807132267 0.000856518 dx FBtr0070914 6537377 6538575 X + 6537954 6538098 3'utr dx FlyBase G59222.1 CTTTATATCGGATTTATATAGGATTAAAATAGTATTTTGAGAGAGGAAATGGAGATGGGTAAATTCGATAGACTTGTCTCACTTGTCTTGGCCATTTAATCTCTTTCATTCAGCGAATTTGATGTGATTTTAATTTGAATTATTC 231 6538022 0.988029273 25 226 2057 0.985663082 2.138302698 0.064516129 0.16017316 0.304659498 231 3 1 275 X:6537954-6538098 6 dx FBtr0070914 6537377 6538575 AATTCG 6mer3-8 dme-miR-995-5p X + 6538001 6538149 3'utr dx FlyBase G44807.2 AATGGAGATGGGTAAATTCGATAGACTTGTCTCACTTGTCTTGGCCATTTAATCTCTTTCATTCAGCGAATTTGATGTGATTTTAATTTGAATTATTCATTATTAAACGGAGCATTTAGGAAGCATAGTTGTAACGCAGCCAGATATTC 145 6538022 0.989176125 20 138 1336 0.958715596 2.320146286 0.02293578 0.344827586 0.564220183 145 9 0 209 X:6538001-6538149 6 72.5 5177 FBgn0000524 299.9366667 9.43 14.42 0.241717696 7.688229056 5.027739251 -7 -7 -7 0.1 dme-miR-308-3p 7mer-m1 TGTGATT X 6538076 6538082 + X_6538076_6538082_+ 0.44312942 0.443130643 0.443130032 8.49E-07 dx FBtr0070914 6537377 6538575 X + 6537954 6538098 3'utr dx FlyBase G59222.1 CTTTATATCGGATTTATATAGGATTAAAATAGTATTTTGAGAGAGGAAATGGAGATGGGTAAATTCGATAGACTTGTCTCACTTGTCTTGGCCATTTAATCTCTTTCATTCAGCGAATTTGATGTGATTTTAATTTGAATTATTC 231 6538072 0.988029273 25 226 2057 0.985663082 2.138302698 0.064516129 0.16017316 0.304659498 231 3 1 275 X:6537954-6538098 7 dx FBtr0070914 6537377 6538575 TGTGATT 7mer-m1 dme-miR-308-3p X + 6538001 6538149 3'utr dx FlyBase G44807.2 AATGGAGATGGGTAAATTCGATAGACTTGTCTCACTTGTCTTGGCCATTTAATCTCTTTCATTCAGCGAATTTGATGTGATTTTAATTTGAATTATTCATTATTAAACGGAGCATTTAGGAAGCATAGTTGTAACGCAGCCAGATATTC 145 6538072 0.989176125 20 138 1336 0.958715596 2.320146286 0.02293578 0.344827586 0.564220183 145 9 0 209 X:6538001-6538149 7 96 5178 FBgn0000524 299.9366667 9.43 14.42 0.32006757 10.18027572 6.65742025 4 4 4 0.1 dme-miR-283-5p 6mer3-8 TGATAT X 6538288 6538293 + X_6538288_6538293_+ 0.999866067 0.999833195 0.999849631 2.33E-05 dx FBtr0070914 6537377 6538575 X + 6538262 6538400 3'utr dx FlyBase G59224.1 CATTTGATGAATTGTTGCTTTCATATTGATATCATCGAGCATCGAACGAACTATCGTATACATCGCCAATATATAGCATATATAGCATATAGTATGTAGAGATCGTACGGACAGCTAGCGGCTACTGACCGCGCCACCA 457 6538287 0.930153984 18 439 3774 0.96 2.225309282 0.352380952 0.115973742 0.23047619 457 19 2 504 X:6538262-6538400 6 dx FBtr0070914 6537377 6538575 TGATAT 6mer3-8 dme-miR-283-5p X + 6538267 6538400 3'utr dx FlyBase G44808.1 GATGAATTGTTGCTTTCATATTGATATCATCGAGCATCGAACGAACTATCGTATACATCGCCAATATATAGCATATATAGCATATAGTATGTAGAGATCGTACGGACAGCTAGCGGCTACTGACCGCGCCACCA 197 6538287 0.985927204 15 187 1569 0.965034965 2.139879086 0.395104895 0.324873096 0.534965035 197 9 1 276 X:6538267-6538400 6 226 5179 FBgn0000524 299.9366667 9.43 14.42 0.753492404 23.96606575 15.67267684 1 1 1 0.1 dme-miR-1006-3p 6mer3-8 CGAATT X 657654 657659 + X_657654_657659_+ 0.506073128 0.482608348 0.494340738 0.016592119 SkpA FBtr0345314|FBtr0070128|FBtr0100530|FBtr0070123|FBtr0070126|FBtr0070124|FBtr0070129|FBtr0070125|FBtr0070127 657597|657597|657597|657597|657597|657597|657597|657597|657597 657899|657899|657899|657899|657899|657899|657899|657899|657899 X + 657599 657692 3'utr SkpA FlyBase G57833.1 AGCGCGGCATTTCGCGGGACCAACATTAAGTTGAAACAGCTAGGGGATTCGGGAACGAATTGGATTTGCAGCATTGCAACTTTACTTAGTTGCT 41 657664 0.920897694 15 40 262 1 1.653212514 0.111111111 0.073170732 0.155555556 41 0 0 45 X:657599-657692 6 SkpA FBtr0070126|FBtr0070129|FBtr0070124|FBtr0070125|FBtr0070127|FBtr0345314|FBtr0070128|FBtr0100530|FBtr0070123 657597|657597|657597|657597|657597|657597|657597|657597|657597 657899|657899|657899|657899|657899|657899|657899|657899|657899 CGAATT 6mer3-8 dme-miR-1006-3p X + 657618 657693 3'utr SkpA FlyBase G43751.1 CCAACATTAAGTTGAAACAGCTAGGGGATTCGGGAACGAATTGGATTTGCAGCATTGCAACTTTACTTAGTTGCTA 49 657663 0.860976914 14 47 316 0.955882353 1.511883361 0.102941176 0.285714286 0.485294118 49 2 1 65 X:657618-657693 6 37 5180 FBgn0025637 1511.546667 228.32 348.46 0.024478239 0.162053259 0.106181484 -10 -9 -9.5 0.1 dme-bantam-3p 6mer3-8 TGATCT X 657757 657762 + X_657757_657762_+ 0.999999814 0.9999999 0.999999857 7.07E-08 SkpA FBtr0345314|FBtr0070128|FBtr0100530|FBtr0070123|FBtr0070126|FBtr0070124|FBtr0070129|FBtr0070125|FBtr0070127 657597|657597|657597|657597|657597|657597|657597|657597|657597 657899|657899|657899|657899|657899|657899|657899|657899|657899 X + 657709 657782 3'utr SkpA FlyBase G57834.1 TTTTTTATTTTTAACCCCAGCAGAGACTCGATTTAAATTGTGTATAAATGATCTGTTGCTGATTTGATTCGCGG 24 657746 0.881938661 8 23 225 0.923076923 0.903089987 0.307692308 0.083333333 0.153846154 24 0 2 24 X:657709-657782 6 SkpA FBtr0070126|FBtr0070129|FBtr0070124|FBtr0070125|FBtr0070127|FBtr0345314|FBtr0070128|FBtr0100530|FBtr0070123 657597|657597|657597|657597|657597|657597|657597|657597|657597 657899|657899|657899|657899|657899|657899|657899|657899|657899 TGATCT 6mer3-8 dme-bantam-3p X + 657719 657785 3'utr SkpA FlyBase G43752.1 TTAACCCCAGCAGAGACTCGATTTAAATTGTGTATAAATGATCTGTTGCTGATTTGATTCGCGGGGT 21 657746 0.986149737 8 20 170 0.967741935 1.477121255 0.225806452 0.285714286 0.516129032 21 1 0 30 X:657719-657785 6 17 5181 FBgn0025637 1511.546667 228.32 348.46 0.011246758 0.074456903 0.048786087 11 11 11 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC X 6596122 6596128 + X_6596122_6596128_+ 0.659126745 0.600661417 0.629894081 0.04134121 Pat1 FBtr0331600|FBtr0070945|FBtr0331599 6595666|6595666|6595666 6596954|6596954|6596630 X + 6596053 6596273 3'utr Pat1 FlyBase G59243.1 AGTTATAACCGAACTACTATACGTATTACATCGTAACGAGAGTGTGGGTCAGCTCAGCAAATTTTTCACTGTGTTCCAGTCATCATCGAATACGTCCAGTACCCCTAGTTCCCGAAGTTTTCAAGGATGCCAAGTCCAGTTTTTTCAGTCAGATAGACCTAGGCTAAGATGTAGTAGTATTGTTGGAGCTTCGGTTAACCGCTTAATCGGGAGATCGTTGA 175 6596151 0.986930285 28 139 1205 0.810945274 1.133006358 0.199004975 0.12 0.233830846 175 27 11 163 X:6596053-6596273 7 Pat1 FBtr0331600|FBtr0070945|FBtr0331599 6595666|6595666|6595666 6596954|6596954|6596630 TGTGTTC 7mer-m8 dme-miR-317-3p X + 6596059 6596184 3'utr Pat1 FlyBase G44824.1 AACCGAACTACTATACGTATTACATCGTAACGAGAGTGTGGGTCAGCTCAGCAAATTTTTCACTGTGTTCCAGTCATCATCGAATACGTCCAGTACCCCTAGTTCCCGAAGTTTTCAAGGATGCCA 89 6596151 0.985205568 16 68 561 0.780487805 0.982271233 0.300813008 0.303370787 0.495934959 89 18 9 96 X:6596059-6596184 7 45 5182 FBgn0029878 899.4033333 29.25 44.72333333 0.05003317 1.538461538 1.006186182 -29 -29 -29 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA X 6596532 6596537 + X_6596532_6596537_+ 1 0.999999959 0.99999998 0 Pat1 FBtr0331600|FBtr0070945|FBtr0331599 6595666|6595666|6595666 6596954|6596954|6596630 X + 6596512 6596555 3'utr Pat1 FlyBase G59246.1 AAGATTTAAAGTTGTATAGAGTGCAAGAAGTATGCCCATTGTAT 5 6596528 0.973416598 2 5 32 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 X:6596512-6596555 6 Pat1 FBtr0331600|FBtr0070945|FBtr0331599 6595666|6595666|6595666 6596954|6596954|6596630 GTGCAA 6mer3-8 dme-miR-92b-3p X + 6596512 6596565 3'utr Pat1 FlyBase G44827.1 AAGATTTAAAGTTGTATAGAGTGCAAGAAGTATGCCCATTGTATAGTCTAAGTC 9 6596544 0.981941051 4 7 54 0.916666667 1.041392685 0.25 0.333333333 0.5 9 1 0 11 X:6596512-6596565 6 5 5183 FBgn0029878 899.4033333 29.25 44.72333333 0.005559241 0.170940171 0.111798465 4 -12 -4 0.1 dme-miR-932-5p 7mer-m8 GGAATTG X 6650575 6650581 + X_6650575_6650581_+ 0.702972863 0.702972868 0.702972865 0 pigs FBtr0308653|FBtr0343375|FBtr0070948 6650412|6650412|6650412 6653015|6653015|6652098 X + 6650536 6650611 3'utr pigs FlyBase G59272.1 GTGGGTAGTGAATAGTTAAGATAGGATTAGAGCCAAGCTGGAATTGTCTGCTGCTGCTACGGCGTGTGTGTGTGCG 128 6650574 0.936510671 16 99 899 0.787671233 1.583576586 0.226027397 0.1328125 0.239726027 128 29 2 115 X:6650536-6650611 7 pigs FBtr0308653|FBtr0343375|FBtr0070948 6650412|6650412|6650412 6653015|6653015|6652098 GGAATTG 7mer-m8 dme-miR-932-5p X + 6650534 6650600 3'utr pigs FlyBase G44847.1 TTGTGGGTAGTGAATAGTTAAGATAGGATTAGAGCCAAGCTGGAATTGTCTGCTGCTGCTACGGCGT 87 6650574 0.937648929 15 67 573 0.774193548 1.681241237 0.25 0.287356322 0.5 87 27 1 96 X:6650534-6650600 7 58 5184 FBgn0029881 6856.753333 130.81 200.9766667 0.008458814 0.443391178 0.288590715 1 1 1 0.1 dme-miR-8-3p 6mer3-8 CAGTAT X 6651675 6651680 + X_6651675_6651680_+ 0.99995822 0.999959134 0.999958677 6.36E-07 pigs FBtr0308653|FBtr0343375|FBtr0070948 6650412|6650412|6650412 6653015|6653015|6652098 X + 6651485 6651697 3'utr pigs FlyBase G59274.1 TACGATCGCAAACACATAGAGGACGCATACCTAGTTTTCTAGAAATTTTTAAAGTAAAGCCAACAAAATTCTTCAGATTCGATTTGTAGCGATGCAGAGAATACGTTTATTTTTGTACGCTTGAACAGAGGAACCGGCGGAGATCGTGGGATCTGGAAAGATGAATAGCTTTTAGACAACTCGACTTTTACAGTATAGCTCTATATATATATG 77 6651672 0.983949203 19 74 571 0.97 1.685741739 0.09 0.220779221 0.4 77 2 1 97 X:6651485-6651697 6 pigs FBtr0308653|FBtr0343375|FBtr0070948 6650412|6650412|6650412 6653015|6653015|6652098 CAGTAT 6mer3-8 dme-miR-8-3p X + 6651598 6651701 3'utr pigs FlyBase G44848.1 TGTACGCTTGAACAGAGGAACCGGCGGAGATCGTGGGATCTGGAAAGATGAATAGCTTTTAGACAACTCGACTTTTACAGTATAGCTCTATATATATATGTATA 43 6651672 0.980874827 12 42 303 0.933333333 1.748188027 0.183333333 0.279069767 0.483333333 43 4 0 56 X:6651598-6651701 6 38.5 5185 FBgn0029881 6856.753333 130.81 200.9766667 0.005614902 0.294320006 0.191564527 3 3 3 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 6652316 6652321 + X_6652316_6652321_+ 0.998181017 0.999354382 0.998767699 0.000829719 pigs FBtr0308653|FBtr0343375 6650412|6650412 6653015|6653015 X + 6652220 6652500 3'utr pigs FlyBase G59280.1 TAACTACAACTATTAAACATTTATTGTATGATTTCATTCTTTTTTTTTTTTTTGTTTCTTTAGATTTAGCAATGTTAACATATAGTTTAGTACATCGTACCTATGCATATAAATTACATACATCATATATAGATTGTAAATTGTGTTTGTCCAATTGCCCACATGTTGTATAGTTCTTATGTACTCGTAAAATCGGCCTTAATGTTCAGTCTGTCGATATCTTGTATCAGTTTCATTTTGTATTCTTTTCTTATCATTATAATTTGTATTTTGAATTTAAG 233 6652323 0.988872396 39 222 2101 0.949090909 1.939519253 0.04 0.154506438 0.283636364 233 12 2 261 X:6652220-6652500 6 pigs FBtr0308653|FBtr0343375 6650412|6650412 6653015|6653015 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X + 6652290 6652440 3'utr pigs FlyBase G44853.1 AATGTTAACATATAGTTTAGTACATCGTACCTATGCATATAAATTACATACATCATATATAGATTGTAAATTGTGTTTGTCCAATTGCCCACATGTTGTATAGTTCTTATGTACTCGTAAAATCGGCCTTAATGTTCAGTCTGTCGATATC 159 6652323 0.850347378 26 147 1313 0.946721311 2.36361198 0.032786885 0.402515723 0.610655738 159 13 0 231 X:6652290-6652440 6 154 5186 FBgn0029881 6856.753333 130.81 200.9766667 0.022459609 1.177280024 0.766258106 -7 -7 -7 0.1 dme-miR-2a-2-5p 7mer-m8 TGATGAG X 6652804 6652810 + X_6652804_6652810_+ 0.658999343 0.658999343 0.658999343 0 pigs FBtr0308653|FBtr0343375 6650412|6650412 6653015|6653015 X + 6652705 6652813 3'utr pigs FlyBase G59281.1 AGAAAATTAAGCAATTGCCCGATTTGCATGCCAAAAGGTTGATAAGAAATCGAGCAAAAAACAAGATGAAGTGCACCACGGGTTCTCGAGCGCTGGCCATGATGAGCAT 15 6652799 0.969187036 7 12 60 0.8125 1.113943352 0.3125 0.066666667 0.125 15 3 0 13 X:6652705-6652813 7 pigs FBtr0308653|FBtr0343375 6650412|6650412 6653015|6653015 TGATGAG 7mer-m8 dme-miR-2a-2-5p X + 6652767 6652812 3'utr pigs FlyBase G44855.1 AAGATGAAGTGCACCACGGGTTCTCGAGCGCTGGCCATGATGAGCA 7 6652806 0.760593471 5 6 23 0.941176471 1.204119983 0.176470588 0.714285714 0.882352941 7 1 0 16 X:6652767-6652812 7 5 5187 FBgn0029881 6856.753333 130.81 200.9766667 0.000729208 0.038223377 0.02487851 5 -2 1.5 0.1 dme-miR-318-3p 6mer3-8 CCCAGT X 6659215 6659220 + X_6659215_6659220_+ 0.999999562 0.891434253 0.945716908 0.07676726 l(1)G0148 FBtr0343377|FBtr0070950 6659154|6659154 6659709|6659709 X + 6659180 6659242 3'utr l(1)G0148 FlyBase G59291.1 ACATACACCACTTGTACATACATACATATACTATACCCAGTTCGCTGATCATGATTGTACATA 9 6659226 0.985920225 6 9 71 1 1 0.1 0.111111111 0.2 9 0 0 10 X:6659180-6659242 6 l(1)G0148 FBtr0070950|FBtr0343377 6659154|6659154 6659709|6659709 CCCAGT 6mer3-8 dme-miR-318-3p X + 6659182 6659237 3'utr l(1)G0148 FlyBase G44861.1 ATACACCACTTGTACATACATACATATACTATACCCAGTTCGCTGATCATGATTGT 7 6659234 0.984238198 5 7 55 1 1 0.7 0.285714286 0.5 7 0 0 10 X:6659182-6659237 6 6.5 5188 FBgn0028360 627.0766667 25.24 38.74333333 0.010365559 0.257527734 0.167770799 -11 -19 -15 0.1 dme-miR-33-5p 6mer3-8 CAATGC X 6659304 6659309 + X_6659304_6659309_+ 0.999999264 0.527506736 0.763753 0.334102722 l(1)G0148 FBtr0343377|FBtr0070950 6659154|6659154 6659709|6659709 X + 6659262 6659348 3'utr l(1)G0148 FlyBase G59292.1 AGCATATCTCATTATTGCACCCAGAGCCAGAAGAAACTCGTCCAATGCCCCACTAGGCCACATTTACTTACCTCAAGCCGCAGGCAG 26 6659307 0.949235065 6 23 102 0.875 1.447158031 0.09375 0.192307692 0.34375 26 4 0 28 X:6659262-6659348 6 l(1)G0148 FBtr0070950|FBtr0343377 6659154|6659154 6659709|6659709 CAATGC 6mer3-8 dme-miR-33-5p X + 6659259 6659347 3'utr l(1)G0148 FlyBase G44862.1 AAGAGCATATCTCATTATTGCACCCAGAGCCAGAAGAAACTCGTCCAATGCCCCACTAGGCCACATTTACTTACCTCAAGCCGCAGGCA 12 6659307 0.954349558 5 11 52 0.944444444 1.230448921 0.111111111 0.333333333 0.555555556 12 1 0 17 X:6659259-6659347 6 14 5189 FBgn0028360 627.0766667 25.24 38.74333333 0.022325819 0.554675119 0.361352491 -3 -3 -3 0.1 dme-miR-304-5p 6mer2-7 GAGATT X 6659476 6659481 + X_6659476_6659481_+ 0.964068041 0.932237042 0.948152541 0.022507916 l(1)G0148 FBtr0343377|FBtr0070950 6659154|6659154 6659709|6659709 X + 6659434 6659514 3'utr l(1)G0148 FlyBase G59293.1 ATGAACAAAATGGGCAAGGAATACCAAAAAAGCAAACGAGGAGAGATTGATTATGAAATATTGTGGCCGAAAGGCTACAAA 269 6659480 0.993519929 10 264 796 0.984177215 1.714609139 0.082278481 0.156133829 0.28164557 269 0 5 311 X:6659434-6659514 6 l(1)G0148 FBtr0070950|FBtr0343377 6659154|6659154 6659709|6659709 GAGATT 6mer2-7 dme-miR-304-5p X + 6659439 6659520 3'utr l(1)G0148 FlyBase G44863.1 CAAAATGGGCAAGGAATACCAAAAAAGCAAACGAGGAGAGATTGATTATGAAATATTGTGGCCGAAAGGCTACAAAATGTTG 144 6659480 0.993904911 12 142 409 0.985645933 2.31386722 0.105263158 0.298611111 0.516746411 144 3 0 206 X:6659439-6659520 6 124 5190 FBgn0028360 627.0766667 25.24 38.74333333 0.197742966 4.912836767 3.200550632 -4 -4 -4 0.1 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA X 6667159 6667166 + X_6667159_6667166_+ 0.625351566 0.625348003 0.625349785 2.55E-06 Ctr1A FBtr0070951|FBtr0308593|FBtr0308592|FBtr0308594 6667050|6667050|6667050|6667050 6668258|6667628|6667628|6667628 X + 6667112 6667188 3'utr Ctr1A FlyBase G59297.1 GAGGCGTTGGAGGAGCAAATGTCCATCTGAATGAAAGGCAGAGGCATTGGTGCTAAGCTGGGAATCCCAGGAAGCTC 252 6667158 0.949332518 4 249 1079 0.992831541 2.141449773 0.35483871 0.083333333 0.172043011 252 1 1 277 X:6667112-6667188 8 Ctr1A FBtr0308594|FBtr0308592|FBtr0308593|FBtr0070951 6667050|6667050|6667050|6667050 6667628|6667628|6667628|6668258 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" X + 6667138 6667189 3'utr Ctr1A FlyBase G44866.1 CTGAATGAAAGGCAGAGGCATTGGTGCTAAGCTGGGAATCCCAGGAAGCTCT 133 6667158 0.884878544 3 131 561 0.985148515 1.997823081 0.292079208 0.37593985 0.589108911 133 2 1 199 X:6667138-6667189 8 190 5191 FBgn0062413 431.6666667 29.72666667 45.48333333 0.44015444 6.391567616 4.177354342 1 1 1 0.1 dme-miR-283-5p 7mer-A1 GATATTA X 6668129 6668135 + X_6668129_6668135_+ 0.779045726 0.782765568 0.780905647 0.002630367 Ctr1A FBtr0070951 6667050 6668258 X + 6668107 6668167 3'utr Ctr1A FlyBase G59299.1 AAGTGCGTAAATAGATGTTGTAGATATTAAACTTAATGCAAATACATACAGTAAAGCGACA 44 6668124 0.989322577 6 43 415 1 1.69019608 0.306122449 0.113636364 0.204081633 44 0 0 49 X:6668107-6668167 7 Ctr1A FBtr0070951 6667050 6668258 GATATTA 7mer-A1 dme-miR-283-5p X + 6668115 6668146 3'utr Ctr1A FlyBase G44867.1 AAATAGATGTTGTAGATATTAAACTTAATGCA 13 6668124 0.733310588 5 13 121 1 1.301029996 0.15 0.230769231 0.5 13 0 0 20 X:6668115-6668146 7 27.5 5192 FBgn0062413 431.6666667 29.72666667 45.48333333 0.063706564 0.925095313 0.604617076 5 5 5 0.1 dme-miR-7-5p 6mer2-7 TCTTCC X 6668833 6668838 - X_6668833_6668838_- 0.999614217 0.999558028 0.999586122 3.97E-05 CG3198 FBtr0070991 6668537 6671982 X - 6668821 6668861 3'utr CG3198 FlyBase G65212.1 CCTTTTCCTGCGAGGAACACACCTCTTCCCTGCCAGCATCC 9 6668836 0.774177435 2 9 67 1 1 0 0.111111111 0.2 9 0 0 10 X:6668821-6668861 6 CG3198 FBtr0070991 6668537 6671982 TCTTCC 6mer2-7 dme-miR-7-5p X - 6668812 6668861 3'utr CG3198 FlyBase G49129.1 CCTTTTCCTGCGAGGAACACACCTCTTCCCTGCCAGCATCCCAGATCCCA 9 6668836 0.98686808 3 7 52 0.785714286 1.041392685 0 0.333333333 0.571428571 9 3 0 11 X:6668812-6668861 6 7.5 5193 FBgn0029887 782.61 18.86666667 28.88333333 0.009583317 0.397526502 0.25966532 -2 -2 -2 0.1 dme-miR-11-3p 7mer-m1 TGTGATG X 6669798 6669804 - X_6669798_6669804_- 0.612034997 0.611529756 0.611782376 0.00035723 CG3198 FBtr0070991 6668537 6671982 X - 6669789 6669918 3'utr CG3198 FlyBase G65217.2 ATGTATGTTCATGTTCCCCCCTCCTCTTCACCAACAGGTAAATTGCGACTGAACCCGACCCCATAAAAATTATGATACTGATATTTGATATCGATCTCGATTAAATCGAATTTTTGTGATGTGACGAGAT 54 6669805 0.971146207 19 49 371 0.933333333 1.146128036 0.15 0.111111111 0.2 54 1 3 56 X:6669789-6669918 7 CG3198 FBtr0070991 6668537 6671982 TGTGATG 7mer-m1 dme-miR-11-3p X - 6669789 6669914 3'utr CG3198 FlyBase G49132.1 ATGTTCATGTTCCCCCCTCCTCTTCACCAACAGGTAAATTGCGACTGAACCCGACCCCATAAAAATTATGATACTGATATTTGATATCGATCTCGATTAAATCGAATTTTTGTGATGTGACGAGAT 33 6669806 0.80084011 14 32 231 0.941176471 1.079181246 0.176470588 0.393939394 0.607843137 33 0 3 48 X:6669789-6669914 7 19.5 5194 FBgn0029887 782.61 18.86666667 28.88333333 0.024916625 1.033568905 0.675129833 1 2 1.5 0.1 dme-miR-308-3p 7mer-m1 TGTGATT X 6681764 6681770 + X_6681764_6681770_+ 0.496533946 0.513064303 0.504799125 0.011688758 l(1)G0255 FBtr0070954|FBtr0070953 6681698|6681698 6681845|6681845 X + 6681740 6681796 5'utr l(1)G0255 FlyBase G59329.1 TCATCGCTGTCATCGGAATCGCAGTGTGATTTTCTAGATCAGATCGTTTTGTTGTAT 47 6681771 0.705869626 4 45 410 0.98245614 1.748188027 0.035087719 0.191489362 0.333333333 47 1 0 56 X:6681740-6681796 7 l(1)G0255 FBtr0070953|FBtr0070954 6681698|6681698 6681845|6681845 TGTGATT 7mer-m1 dme-miR-308-3p X + 6681743 6681791 5'utr l(1)G0255 FlyBase G44891.1 TCGCTGTCATCGGAATCGCAGTGTGATTTTCTAGATCAGATCGTTTTGT 32 6681770 0.664938564 7 32 255 1 1.653212514 0.177777778 0.3125 0.511111111 32 0 0 45 X:6681743-6681791 7 38.5 5195 FBgn0028336 742.12 52.61 80.51333333 0.051878402 0.731800038 0.478181668 -7 -6 -6.5 0.1 dme-miR-980-3p 7mer-A1 GCAGCTA X 6689439 6689445 - X_6689439_6689445_- 0.814146023 0.81297248 0.813559251 0.00082979 CG14442 FBtr0070988|FBtr0339493|FBtr0300772|FBtr0339491 6689294|6689318|6689318|6689318 6689803|6689803|6689803|6689803 X - 6689341 6689497 3'utr CG14442 FlyBase G65234.1 AAATGAAATGAAACACTGTGACGCCCCGAAAGCCACTGAAAATCGAAGAAATGCAGCTAAAATAAAAAGATAACTACGATCGATGGTGGAGATCCAACTAAACCTAATCCAGAATATGTAGCGCGTAAACAGAGCACTAAGTAGTTGTATGTATTAA 95 6689446 0.956170855 14 93 311 0.983193277 1.591064607 0.201680672 0.189473684 0.352941176 95 0 2 117 X:6689341-6689497 7 CG14442 FBtr0339491|FBtr0300772|FBtr0339493|FBtr0070988 6689318|6689318|6689318|6689294 6689803|6689803|6689803|6689803 GCAGCTA 7mer-A1 dme-miR-980-3p X - 6689390 6689484 3'utr CG14442 FlyBase G49142.1 CACTGTGACGCCCCGAAAGCCACTGAAAATCGAAGAAATGCAGCTAAAATAAAAAGATAACTACGATCGATGGTGGAGATCCAACTAAACCTAAT 62 6689446 0.957393786 8 62 187 1 1.886490725 0.168831169 0.209677419 0.363636364 62 0 0 77 X:6689390-6689484 7 50 5196 FBgn0029893 971.2033333 28.72 44.23333333 0.051482525 1.740947075 1.130369254 1 1 1 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 6696116 6696122 - X_6696116_6696122_- 0.661587273 0.661591494 0.661589383 2.97E-06 CG14440 FBtr0070987 6695864 6697328 X - 6696088 6696143 3'utr CG14440 FlyBase G65246.1 AATAAAGTGTAACCATTAAGTTCTAGTCGAAATTTCAAATTGTTTTTCTCCTGTCT 34 6696123 0.981979081 3 34 259 1 1.568201724 0.135135135 0.088235294 0.162162162 34 0 0 37 X:6696088-6696143 7 CG14440 FBtr0070987 6695864 6697328 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X - 6696108 6696143 3'utr CG14440 FlyBase G49150.1 AATAAAGTGTAACCATTAAGTTCTAGTCGAAATTTC 14 6696123 0.719570925 2 13 101 0.727272727 1.204119983 0 0.285714286 0.545454545 14 6 0 16 X:6696108-6696143 7 23.5 5197 FBgn0029894 265.63 13.82333333 21.15 0.088468923 1.700024114 1.111111111 1 1 1 0.1 dme-miR-980-3p 6mer3-8 GGCAGC X 6697074 6697079 - X_6697074_6697079_- 0.999997883 0.99999895 0.999998417 7.78E-07 CG14440 FBtr0070987|FBtr0310419 6695864|6696764 6697328|6697328 X - 6697041 6697099 3'utr CG14440 FlyBase G65249.1 TGAGGACTTGCAAATGAATGGGCAGCAGGCACTCTAGGATTAAAGCCAGGCAATTTTTT 24 6697081 0.959687632 6 21 102 0.866666667 1.113943352 0.233333333 0.25 0.4 24 3 1 26 X:6697041-6697099 6 CG14440 FBtr0310419|FBtr0070987 6696764|6695864 6697328|6697328 GGCAGC 6mer3-8 dme-miR-980-3p X - 6697054 6697099 3'utr CG14440 FlyBase G49152.1 TGAGGACTTGCAAATGAATGGGCAGCAGGCACTCTAGGATTAAAGC 10 6697082 0.868282228 2 10 36 1 1.113943352 0.307692308 0.2 0.384615385 10 0 0 13 X:6697054-6697099 6 15 5198 FBgn0029894 265.63 13.82333333 21.15 0.056469525 1.085121775 0.709219858 2 3 2.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC X 6721473 6721478 - X_6721473_6721478_- 0.999999956 0.999999985 0.99999997 0 CG3168 FBtr0340265|FBtr0070984|FBtr0340267|FBtr0340266|FBtr0070986|FBtr0070985|FBtr0340268 6720473|6720473|6720473|6720473|6720473|6720473|6720002 6721551|6721551|6721551|6721551|6721551|6721551|6721551 X - 6721452 6721502 3'utr CG3168 FlyBase G65255.1 CCATAGAATCTTCTGCTTTAACTGCTAGTCTGCAAGGTCTTGTTTCGAGTC 11 6721488 0.742662216 5 9 95 0.8125 1.113943352 0.125 0.454545455 0.625 11 3 0 13 X:6721452-6721502 6 CG3168 FBtr0070985|FBtr0340268|FBtr0340266|FBtr0070986|FBtr0340267|FBtr0340265|FBtr0070984 6720473|6720002|6720473|6720473|6720473|6720473|6720473 6721551|6721551|6721551|6721551|6721551|6721551|6721551 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" X - 6721441 6721488 3'utr CG3168 FlyBase G49156.1 GCTTTAACTGCTAGTCTGCAAGGTCTTGTTTCGAGTCATGATACTATG 6 6721472 0.985759735 3 4 41 1 0.954242509 0.666666667 0.5 0.666666667 6 0 0 9 X:6721441-6721488 6 6 5199 FBgn0029896 793.0366667 27.79 42.01333333 0.007565854 0.215905002 0.142811806 10 -6 2 0.1 dme-miR-317-3p 6mer3-8 TGTGTT X 6780948 6780953 - X_6780948_6780953_- 0.999795097 0.999998533 0.999896815 0.000143826 C3G FBtr0340087|FBtr0299791 6780788|6780788 6782353|6782353 X - 6780913 6780990 3'utr C3G FlyBase G65272.1 TTTTTGCTGCTGCTTCCGCTGCCGCTGGCGCATCAATTGTGTTTACTAAGCTAACGAACCTAGGGACAACAATTTATT 14 6780954 0.986268894 6 14 122 1 1.230448921 0.176470588 0.214285714 0.352941176 14 0 0 17 X:6780913-6780990 6 C3G FBtr0299791|FBtr0340087 6780788|6780788 6782353|6782353 TGTGTT 6mer3-8 dme-miR-317-3p X - 6780944 6780986 3'utr C3G FlyBase G49168.1 TGCTGCTGCTTCCGCTGCCGCTGGCGCATCAATTGTGTTTACT 9 6780954 0.984394933 4 9 69 1 1.176091259 0.266666667 0.333333333 0.6 9 0 0 15 X:6780944-6780986 6 8.5 5200 FBgn0259228 1638.55 32.65333333 50.12 0.005187513 0.260310331 0.169592977 1 1 1 0.1 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA X 6781079 6781086 - X_6781079_6781086_- 0.626819867 0.626942149 0.626881008 8.64E-05 C3G FBtr0340087|FBtr0299791 6780788|6780788 6782353|6782353 X - 6781048 6781108 3'utr C3G FlyBase G65273.1 AACAGAAAAAAAGGCTGCTTACTTGAAGAATTTAATTCCCGATCACCATAGCCATTTTAAT 11 6781090 0.953142618 4 11 55 1 1.176091259 0.066666667 0.363636364 0.533333333 11 0 0 15 X:6781048-6781108 8 C3G FBtr0299791|FBtr0340087 6780788|6780788 6782353|6782353 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p X - 6781064 6781107 3'utr C3G FlyBase G49169.1 ACAGAAAAAAAGGCTGCTTACTTGAAGAATTTAATTCCCGATCA 9 6781089 0.943563448 3 9 38 1 1.176091259 0 0.333333333 0.6 9 0 0 15 X:6781064-6781107 8 9 5201 FBgn0259228 1638.55 32.65333333 50.12 0.005492661 0.275622703 0.179569034 4 3 3.5 0.1 dme-miR-1012-3p 6mer3-8 TTGACT X 6781281 6781286 - X_6781281_6781286_- 0.51435784 0.537631432 0.525994636 0.01645692 C3G FBtr0340087|FBtr0299791 6780788|6780788 6782353|6782353 X - 6781197 6781308 3'utr C3G FlyBase G65275.1 AATAATAGTTCTAAATAACGCTTTGACTTCTCCTTTCAATTCTGTGAGGAATAAATTTATTGATATTGCGTGTAAAAATATTAATCATGAGAAGAAATCTGAAAGCAGAGTT 47 6781286 0.898980112 11 47 405 1 1.755874856 0.087719298 0.212765957 0.350877193 47 0 0 57 X:6781197-6781308 6 C3G FBtr0299791|FBtr0340087 6780788|6780788 6782353|6782353 TTGACT 6mer3-8 dme-miR-1012-3p X - 6781257 6781312 3'utr C3G FlyBase G49170.1 ATGTAATAATAGTTCTAAATAACGCTTTGACTTCTCCTTTCAATTCTGTGAGGAAT 21 6781286 0.733428383 6 17 228 0.75862069 0.740362689 0.379310345 0.285714286 0.482758621 21 4 3 22 X:6781257-6781312 6 27.5 5202 FBgn0259228 1638.55 32.65333333 50.12 0.016783131 0.842180482 0.54868316 0 0 0 0.1 dme-miR-304-5p 6mer3-8 TGAGAT X 6781828 6781833 - X_6781828_6781833_- 0.593985279 0.600379116 0.597182197 0.004521099 C3G FBtr0300526|FBtr0334967|FBtr0299794|FBtr0299793|FBtr0334968|FBtr0340087|FBtr0299791|FBtr0299795|FBtr0299792|FBtr0334969 6781414|6781414|6781414|6781414|6781414|6780788|6780788|6781414|6781414|6781414 6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353 X - 6781806 6781858 3'utr C3G FlyBase G65276.1 AAATCAGCAATTTTCGCTTTTGTTTTGAGATCTCTTTTTTACACAAGAACACA 26 6781824 0.979570102 9 24 340 0.931034483 1.431363764 0.413793103 0.115384615 0.206896552 26 2 0 27 X:6781806-6781858 6 C3G FBtr0299792|FBtr0334969|FBtr0299791|FBtr0299795|FBtr0334968|FBtr0340087|FBtr0300526|FBtr0334967|FBtr0299794|FBtr0299793 6781414|6781414|6780788|6781414|6781414|6780788|6781414|6781414|6781414|6781414 6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353 TGAGAT 6mer3-8 dme-miR-304-5p X - 6781815 6781847 3'utr C3G FlyBase G49172.1 TTTCGCTTTTGTTTTGAGATCTCTTTTTTACAC 22 6781823 0.624662568 9 21 307 0.972222222 1.544068044 0.583333333 0.409090909 0.638888889 22 1 0 35 X:6781815-6781847 6 22 5203 FBgn0259228 1638.55 32.65333333 50.12 0.013426505 0.673744385 0.438946528 -9 -10 -9.5 0.1 dme-miR-278-3p 6mer3-8 CCCACC X 6781977 6781982 - X_6781977_6781982_- 0.927974026 0.994136231 0.961055129 0.04678374 C3G FBtr0300526|FBtr0334967|FBtr0299794|FBtr0299793|FBtr0334968|FBtr0340087|FBtr0299791|FBtr0299795|FBtr0299792|FBtr0334969 6781414|6781414|6781414|6781414|6781414|6780788|6780788|6781414|6781414|6781414 6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353 X - 6781952 6782013 3'utr C3G FlyBase G65277.1 TTGGGTCGATGGACCTAACCTCAGCTAACTCCCCACCAATATTCGAATCCGAATCCCTGTCT 6 6781984 0.972909422 6 6 35 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 X:6781952-6782013 6 C3G FBtr0299792|FBtr0334969|FBtr0299791|FBtr0299795|FBtr0334968|FBtr0340087|FBtr0300526|FBtr0334967|FBtr0299794|FBtr0299793 6781414|6781414|6780788|6781414|6781414|6780788|6781414|6781414|6781414|6781414 6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353 CCCACC 6mer3-8 dme-miR-278-3p X - 6781977 6782028 3'utr C3G FlyBase G49173.1 AAGCTCTATGAGTCATTGGGTCGATGGACCTAACCTCAGCTAACTCCCCACC 10 6782012 0.978077675 4 8 57 0.923076923 1.079181246 0.153846154 0.3 0.461538462 10 1 0 12 X:6781977-6782028 5 2.5 5204 FBgn0259228 1638.55 32.65333333 50.12 0.001525739 0.076561862 0.049880287 2 30 16 0.1 dme-miR-190-5p 6mer3-8 ACATAT X 6812161 6812166 + X_6812161_6812166_+ 1 1 1 0 pod1 FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228|FBtr0112956|FBtr0070964|FBtr0070966 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813830|6813830|6813830|6813830|6813520|6813830|6813830 X + 6812103 6812165 3'utr pod1 FlyBase G59407.1 TCAGTTTATGTGGCCATATAGGAAAAGTGAGGAGAAGGACTTAGATGATACTGCTTTTACATA 8 6812159 0.93192631 7 7 60 0.888888889 0.903089987 0 0.125 0.222222222 8 1 0 8 X:6812103-6812165 5 pod1 FBtr0112956|FBtr0070964|FBtr0070966|FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813520|6813830|6813830|6813830|6813830|6813830|6813830 ACATAT 6mer3-8 dme-miR-190-5p X + 6812107 6812191 3'utr pod1 FlyBase G44936.1 TTTATGTGGCCATATAGGAAAAGTGAGGAGAAGGACTTAGATGATACTGCTTTTACATATACGCAAAATGTATTTCCCTCTCTGT 8 6812144 0.984837052 8 8 65 1 1.041392685 0 0.375 0.545454545 8 0 0 11 X:6812107-6812191 6 2.5 5205 FBgn0029903 1544.65 31.03666667 47.70666667 0.00161849 0.080549887 0.052403577 2 17 9.5 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 6812373 6812379 + X_6812373_6812379_+ 0.661615511 0.661615511 0.661615511 0 pod1 FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228|FBtr0112956|FBtr0070964|FBtr0070966 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813830|6813830|6813830|6813830|6813520|6813830|6813830 X + 6812358 6812404 3'utr pod1 FlyBase G59409.2 ACCCCCACCATTGTTTCTAGTCTTTCGCATCGTTCGATCCCCCAAAT 90 6812380 0.790910513 10 61 825 0.673267327 1.230448921 0.108910891 0.122222222 0.217821782 90 30 3 68 X:6812358-6812404 7 pod1 FBtr0112956|FBtr0070964|FBtr0070966|FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813520|6813830|6813830|6813830|6813830|6813830|6813830 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X + 6812359 6812403 3'utr pod1 FlyBase G44937.2 CCCCCACCATTGTTTCTAGTCTTTCGCATCGTTCGATCCCCCAAA 91 6812380 0.630473063 8 45 765 0.510948905 0.942008053 0.03649635 0.395604396 0.598540146 91 60 7 70 X:6812359-6812403 7 82.5 5206 FBgn0029903 1544.65 31.03666667 47.70666667 0.053410158 2.658146279 1.729318055 -7 -7 -7 0.1 dme-miR-14-3p 6mer2-7 AGACTG X 6812467 6812472 + X_6812467_6812472_+ 0.999997473 0.999997687 0.99999758 1.41E-07 pod1 FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228|FBtr0112956|FBtr0070964|FBtr0070966 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813830|6813830|6813830|6813830|6813520|6813830|6813830 X + 6812446 6812488 3'utr pod1 FlyBase G59410.1 AGACAGGAAACAAAAACATATAGACTGTAGCCAAACGAAAAAT 99 6812466 0.900310695 3 98 295 0.991869919 1.785329835 0.097560976 0.222222222 0.37398374 99 0 1 122 X:6812446-6812488 6 pod1 FBtr0112956|FBtr0070964|FBtr0070966|FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813520|6813830|6813830|6813830|6813830|6813830|6813830 AGACTG 6mer2-7 dme-miR-14-3p X + 6812450 6812488 3'utr pod1 FlyBase G44938.1 AGGAAACAAAAACATATAGACTGTAGCCAAACGAAAAAT 71 6812466 0.889506262 3 69 215 0.979166667 1.496006599 0.104166667 0.253521127 0.447916667 71 0 2 94 X:6812450-6812488 6 84.5 5207 FBgn0029903 1544.65 31.03666667 47.70666667 0.054704949 2.722586188 1.771240917 1 1 1 0.1 dme-miR-970-3p 6mer3-8 TCTTAT X 6813451 6813456 + X_6813451_6813456_+ 0.999987852 0.999996597 0.999992225 6.15E-06 pod1 FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228|FBtr0112956|FBtr0070964|FBtr0070966 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813830|6813830|6813830|6813830|6813520|6813830|6813830 X + 6813432 6813472 3'utr pod1 FlyBase G59414.1 ATTACGATTTTCGAACGTCTCTTATTTATATTTATATATAT 20 6813453 0.739894318 4 19 217 0.96 1.380211242 0 0.2 0.36 20 1 0 24 X:6813432-6813472 6 pod1 FBtr0112956|FBtr0070964|FBtr0070966|FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813520|6813830|6813830|6813830|6813830|6813830|6813830 TCTTAT 6mer3-8 dme-miR-970-3p X + 6813404 6813470 3'utr pod1 FlyBase G44943.1 GTCATTCTGTATTTATTAGCCATATTCGATTACGATTTTCGAACGTCTCTTATTTATATTTATATAT 18 6813453 0.990403806 6 18 189 1 1.447158031 0.035714286 0.444444444 0.642857143 18 0 0 28 X:6813404-6813470 6 16.5 5208 FBgn0029903 1544.65 31.03666667 47.70666667 0.010682032 0.531629256 0.345863611 -2 -2 -2 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA X 6818313 6818318 - X_6818313_6818318_- 0.999996518 0.999983793 0.999990156 8.98E-06 Nf-YC FBtr0070974 6818176 6818700 X - 6818293 6818330 3'utr Nf-YC FlyBase G65291.1 ATTAGTGTATGTATGTGACGGGTGACGGATGCCACCGG 10 6818319 0.675501185 5 7 49 0.769230769 0.698970004 0.538461538 0.2 0.384615385 10 2 1 10 X:6818293-6818330 6 Nf-YC FBtr0070974 6818176 6818700 ATGTGA 6mer3-8 dme-miR-1003-3p X - 6818293 6818327 3'utr Nf-YC FlyBase G49180.1 AGTGTATGTATGTGACGGGTGACGGATGCCACCGG 6 6818319 0.706875651 3 5 31 0.888888889 0.903089987 0 0.5 0.666666667 6 1 0 8 X:6818293-6818327 6 7.5 5209 FBgn0029905 205.9466667 9.923333333 15.23333333 0.036417195 0.755794424 0.492341357 1 1 1 0.1 dme-miR-980-3p 6mer3-8 GGCAGC X 6818417 6818422 - X_6818417_6818422_- 0.99990928 0.999990284 0.999949782 5.73E-05 Nf-YC FBtr0070974 6818176 6818700 X - 6818401 6818444 3'utr Nf-YC FlyBase G65292.1 ATTGCTGACCCTCCCGCCCCCTGGCAGCAGGTTTCACCTTCTCC 11 6818423 0.941393583 2 11 48 1 1.079181246 0.166666667 0.090909091 0.166666667 11 0 0 12 X:6818401-6818444 6 Nf-YC FBtr0070974 6818176 6818700 GGCAGC 6mer3-8 dme-miR-980-3p X - 6818408 6818473 3'utr Nf-YC FlyBase G49181.1 GTGTAGAAACGATTTCTCAATTGTAATTTATTGCTGACCCTCCCGCCCCCTGGCAGCAGGTTTCAC 9 6818423 0.99961713 4 8 46 0.928571429 1.113943352 0.071428571 0.333333333 0.571428571 9 1 0 13 X:6818408-6818473 6 7 5210 FBgn0029905 205.9466667 9.923333333 15.23333333 0.033989382 0.705408129 0.4595186 1 1 1 0.1 dme-miR-11-3p 7mer-m1 TGTGATG X 6839650 6839656 - X_6839650_6839656_- 0.535593355 0.535593548 0.535593452 7.07E-08 CG14435 FBtr0071042|FBtr0343323 6839430|6838172 6840376|6840376 X - 6839636 6839683 3'utr CG14435 FlyBase G65305.1 ACCAACCAACAAAAGAATGTCAACCAATGTGATGTTAAATTTTATATT 58 6839649 0.986446574 7 53 460 0.929577465 1.51851394 0.112676056 0.206896552 0.352112676 58 4 1 66 X:6839636-6839683 7 CG14435 FBtr0343323|FBtr0071042 6838172|6839430 6840376|6840376 TGTGATG 7mer-m1 dme-miR-11-3p X - 6839635 6839682 3'utr CG14435 FlyBase G49188.2 CCAACCAACAAAAGAATGTCAACCAATGTGATGTTAAATTTTATATTT 45 6839649 0.987678926 9 39 361 0.880597015 1.469822016 0.23880597 0.355555556 0.567164179 45 7 1 59 X:6839635-6839682 7 48.5 5211 FBgn0029911 561.5333333 25.08 38.61666667 0.086370652 1.933811802 1.255934398 -7 -7 -7 0.1 dme-miR-2a-2-5p 6mer2-7 GATGAG X 6839710 6839715 - X_6839710_6839715_- 0.824844152 0.999881855 0.912363003 0.123770345 CG14435 FBtr0071042|FBtr0343323 6839430|6838172 6840376|6840376 X - 6839705 6839756 3'utr CG14435 FlyBase G65306.1 AAGCAGAAGATTTTGATGATGACGAACGAGATGAGAATAAGGATGAGCGTAA 6 6839739 0.932897231 5 5 30 0.833333333 0.698970004 0.166666667 0 0 6 1 0 5 X:6839705-6839756 6 CG14435 FBtr0343323|FBtr0071042 6838172|6839430 6840376|6840376 GATGAG 6mer2-7 dme-miR-2a-2-5p X - 6839704 6839739 3'utr CG14435 FlyBase G49189.1 GATGACGAACGAGATGAGAATAAGGATGAGCGTAAA 10 6839719 0.74055207 3 8 26 0.882352941 1.176091259 0.470588235 0.7 0.823529412 10 2 0 15 X:6839704-6839739 6 6 5212 FBgn0029911 561.5333333 25.08 38.61666667 0.010685029 0.23923445 0.155373328 24 4 14 0.1 dme-miR-282-5p 8mer-A1 AGAGGCTA X 6839994 6840001 - X_6839994_6840001_- 0.636153055 0.637906147 0.637029601 0.001239558 CG14435 FBtr0071042|FBtr0343323 6839430|6838172 6840376|6840376 X - 6839989 6840050 3'utr CG14435 FlyBase G65308.1 GACACTGCGACCAGTTGGAGCTTGGAAAGATTGGAGGATGGTACATGGGAGAGGCTATGCCA 8 6840019 0.831677519 6 7 34 1 0.903089987 0.25 0 0 8 0 0 8 X:6839989-6840050 8 CG14435 FBtr0343323|FBtr0071042 6838172|6839430 6840376|6840376 AGAGGCTA 8mer-A1 dme-miR-282-5p X - 6839986 6840051 3'utr CG14435 FlyBase G49191.1 GGACACTGCGACCAGTTGGAGCTTGGAAAGATTGGAGGATGGTACATGGGAGAGGCTATGCCACAA 6 6840005 0.946542835 3 5 25 1 0.954242509 0.444444444 0.5 0.666666667 6 0 0 9 X:6839986-6840051 8 3.5 5213 FBgn0029911 561.5333333 25.08 38.61666667 0.006232934 0.139553429 0.090634441 18 4 11 0.1 dme-bantam-3p 6mer2-7 GATCTC X 6851328 6851333 + X_6851328_6851333_+ 0.661384507 0.613803975 0.637594241 0.033644494 CG4558 FBtr0070995 6851128 6851884 X + 6851284 6851358 3'utr CG4558 FlyBase G59443.1 CCCTATGCTTTTGCAGTCAGTTACAATTGGTTGTACTGGAAACCGATCTCTGCGCCGGATCCCATCTCCGAAACG 152 6851334 0.946657051 6 149 609 0.989130435 2.260071388 0.364130435 0.177631579 0.320652174 152 2 0 182 X:6851284-6851358 6 CG4558 FBtr0070995 6851128 6851884 GATCTC 6mer2-7 dme-bantam-3p X + 6851301 6851390 3'utr CG4558 FlyBase G44964.1 CAGTTACAATTGGTTGTACTGGAAACCGATCTCTGCGCCGGATCCCATCTCCGAAACGCTGTCCATCAGCCTAATTGGATCTTACTGCTA 89 6851334 0.853351808 7 86 395 0.976923077 2.103803721 0.276923077 0.359550562 0.561538462 89 3 0 127 X:6851301-6851390 6 115.5 5214 FBgn0029914 220.6666667 13.97333333 21.30666667 0.523413897 8.265744275 5.420838548 -6 -6 -6 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC X 6851723 6851729 + X_6851723_6851729_+ 0.602968056 0.648285679 0.625626867 0.032044382 CG4558 FBtr0070995|FBtr0300177 6851128|6851390 6851884|6851884 X + 6851685 6851839 3'utr CG4558 FlyBase G59445.1 CAGTTAACAGTTAGCTCCTGGCAGCCGCGCTTCATCCTTGTGTTCGTCGTTCTAACCATTTTGCATTTAAAACTCTCGACTCTACGTTCTGTTCACACCAACTAGCGTAGCCAACGGAAAGCGATTTTGTAAATATCCATTGCCAGACTTGAGTT 94 6851745 0.986301179 14 91 781 0.981481481 2.025305865 0.064814815 0.138297872 0.25 94 2 0 106 X:6851685-6851839 7 CG4558 FBtr0070995|FBtr0300177 6851128|6851390 6851884|6851884 TGTGTTC 7mer-m8 dme-miR-317-3p X + 6851688 6851814 3'utr CG4558 FlyBase G44966.1 TTAACAGTTAGCTCCTGGCAGCCGCGCTTCATCCTTGTGTTCGTCGTTCTAACCATTTTGCATTTAAAACTCTCGACTCTACGTTCTGTTCACACCAACTAGCGTAGCCAACGGAAAGCGATTTTGT 39 6851722 0.987748038 8 37 331 0.943396226 1.22184875 0.169811321 0.230769231 0.433962264 39 1 2 50 X:6851688-6851814 7 24 5215 FBgn0029914 220.6666667 13.97333333 21.30666667 0.108761329 1.717557252 1.12640801 -22 1 -10.5 0.1 dme-miR-277-3p 8mer-A1 TGCATTTA X 6851746 6851753 + X_6851746_6851753_+ 0.624732022 0.619800667 0.622266345 0.003486956 CG4558 FBtr0070995|FBtr0300177 6851128|6851390 6851884|6851884 X + 6851685 6851839 3'utr CG4558 FlyBase G59445.1 CAGTTAACAGTTAGCTCCTGGCAGCCGCGCTTCATCCTTGTGTTCGTCGTTCTAACCATTTTGCATTTAAAACTCTCGACTCTACGTTCTGTTCACACCAACTAGCGTAGCCAACGGAAAGCGATTTTGTAAATATCCATTGCCAGACTTGAGTT 94 6851745 0.986301179 14 91 781 0.981481481 2.025305865 0.064814815 0.138297872 0.25 94 2 0 106 X:6851685-6851839 8 CG4558 FBtr0070995|FBtr0300177 6851128|6851390 6851884|6851884 TGCATTTA 8mer-A1 dme-miR-277-3p X + 6851688 6851814 3'utr CG4558 FlyBase G44966.1 TTAACAGTTAGCTCCTGGCAGCCGCGCTTCATCCTTGTGTTCGTCGTTCTAACCATTTTGCATTTAAAACTCTCGACTCTACGTTCTGTTCACACCAACTAGCGTAGCCAACGGAAAGCGATTTTGT 39 6851722 0.987748038 8 37 331 0.943396226 1.22184875 0.169811321 0.230769231 0.433962264 39 1 2 50 X:6851688-6851814 8 20 5216 FBgn0029914 220.6666667 13.97333333 21.30666667 0.090634441 1.43129771 0.938673342 1 24 12.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 6851938 6851943 - X_6851938_6851943_- 0.755363009 0.755363009 0.755363009 0 CG14434 FBtr0345899|FBtr0345899|FBtr0345899|FBtr0343322|FBtr0343322|FBtr0343322|FBtr0071040|FBtr0071040|FBtr0071040 6851907|6851907|6851907|6851907|6851907|6851907|6851907|6851907|6851907 6852045|6852045|6852045|6852045|6852045|6852045|6852045|6852045|6852045 X - 6851926 6851955 3'utr CG14434 FlyBase G65314.1 CCATAAAACATTCTGTGAGGCAAACAAAAA 5 6851942 0.908657898 3 5 17 1 0.903089987 0 0.6 0.75 5 0 0 8 X:6851926-6851955 6 CG14434 FBtr0071040|FBtr0071040|FBtr0071040|FBtr0343322|FBtr0343322|FBtr0343322|FBtr0345899|FBtr0345899|FBtr0345899 6851907|6851907|6851907|6851907|6851907|6851907|6851907|6851907|6851907 6852045|6852045|6852045|6852045|6852045|6852045|6852045|6852045|6852045 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X - 6851927 6851962 3'utr CG14434 FlyBase G49195.1 TTGTTATCCATAAAACATTCTGTGAGGCAAACAAAA 10 6851942 0.95233215 3 8 41 0.875 1.146128036 0 0.4 0.625 10 2 0 14 X:6851927-6851962 6 7.5 5217 FBgn0029915 147.6666667 23.04333333 35.10666667 0.050790068 0.325473745 0.213634637 -1 -1 -1 0.1 dme-bantam-3p 6mer2-7 GATCTC X 6879019 6879024 + X_6879019_6879024_+ 0.999999996 1 0.999999998 0 CG43736 FBtr0345898|FBtr0330265|FBtr0330263|FBtr0330268|FBtr0330264 6878698|6878698|6878698|6878698|6878698 6881580|6880502|6880429|6881580|6880095 X + 6878965 6879061 3'utr CG43736 FlyBase G59476.1 CGCCACCGCCAGCTCCGGCAGTTCCAGCCACACCACCCGGAGCGGGAACCATTGGATCTCCTGCACTATCAGCAACACCTGTACACACCACCAGCAA 53 6879017 0.952118737 7 51 225 0.966666667 1.462397998 0.266666667 0.113207547 0.216666667 53 1 1 58 X:6878965-6879061 6 CG43736 FBtr0345898|FBtr0330265|FBtr0330268|FBtr0330263|FBtr0330264 6878698|6878698|6878698|6878698|6878698 6881580|6880502|6881580|6880429|6880095 GATCTC 6mer2-7 dme-bantam-3p X + 6878965 6879063 3'utr CG43736 FlyBase G44982.1 CGCCACCGCCAGCTCCGGCAGTTCCAGCCACACCACCCGGAGCGGGAACCATTGGATCTCCTGCACTATCAGCAACACCTGTACACACCACCAGCAACA 43 6879026 0.950015205 7 42 182 0.985294118 1.826074803 0.25 0.348837209 0.588235294 43 1 0 67 X:6878965-6879063 6 43.5 5218 FBgn0263993 1284.363333 32.20666667 49.73 0.033868921 1.350652039 0.874723507 2 -7 -2.5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 6958287 6958292 - X_6958287_6958292_- 0.992827265 0.976569898 0.984698582 0.011495718 CG32732 FBtr0071039 6958030 6958448 X - 6958274 6958310 3'utr CG32732 FlyBase G65319.1 CAGGTTTTGAAGTTGGATACCAAAATAACTTATAATT 14 6958294 0.725897259 6 10 89 0.705882353 1.079181246 0.294117647 0.214285714 0.352941176 14 5 0 12 X:6958274-6958310 6 CG32732 FBtr0071039 6958030 6958448 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X - 6958279 6958308 3'utr CG32732 FlyBase G49198.1 GGTTTTGAAGTTGGATACCAAAATAACTTA 8 6958294 0.737993789 4 7 44 0.9 0.954242509 0.1 0.25 0.4 8 1 0 9 X:6958279-6958308 6 11 5219 FBgn0052732 209.6666667 11.63 17.8 0.052464229 0.945829751 0.617977528 2 2 2 0.1 dme-miR-968-5p 6mer3-8 ACTACT X 7098639 7098644 - X_7098639_7098644_- 0.521491074 0.625501232 0.573496153 0.073546247 CG4615 FBtr0071020 7098576 7099373 X - 7098605 7098715 3'utr CG4615 FlyBase G65350.1 ATTTACAAATACGCTTGATATCTTGATATTTTCGGGGCCTGGCTCGCGATCGGCGGATATAGCTTTCGTGTACTACTCGTATTTATGGTGCAGATCGATTAGTTTTAATGG 38 7098647 0.911034282 11 32 327 0.860465116 1.267171728 0.139534884 0.105263158 0.209302326 38 5 1 37 X:7098605-7098715 6 CG4615 FBtr0071020 7098576 7099373 ACTACT 6mer3-8 dme-miR-968-5p X - 7098616 7098738 3'utr CG4615 FlyBase G49212.1 CGCAGATACTGAAGAAGGTGACTATTTACAAATACGCTTGATATCTTGATATTTTCGGGGCCTGGCTCGCGATCGGCGGATATAGCTTTCGTGTACTACTCGTATTTATGGTGCAGATCGATT 30 7098647 0.886985773 12 26 228 0.866666667 1.591064607 0.288888889 0.333333333 0.555555556 30 6 0 39 X:7098616-7098738 6 15 5220 FBgn0029935 110.3333333 6.846666667 10.52 0.135951662 2.190847128 1.425855513 3 3 3 0.1 dme-miR-14-3p 6mer3-8 AAGACT X 7098998 7099003 - X_7098998_7099003_- 0.778621107 0.908442255 0.843531681 0.091797451 CG4615 FBtr0071020 7098576 7099373 X - 7098982 7099023 3'utr CG4615 FlyBase G65351.1 TTTGGCCATGTGTTTCTCAAAAGACTTTGAACCGTACTCAAA 20 7098996 0.818299503 2 19 137 0.962962963 1.414973348 0.481481481 0.25 0.444444444 20 1 0 26 X:7098982-7099023 6 CG4615 FBtr0071020 7098576 7099373 AAGACT 6mer3-8 dme-miR-14-3p X - 7098972 7099092 3'utr CG4615 FlyBase G49213.1 CCTCTCCCTCTCAACTTTAACTTGATATTATTAGCGATATTCATATATTTAGTATCCATAACGACCCGTTTTGGCCATGTGTTTCTCAAAAGACTTTGAACCGTACTCAAAAGGCAAAGGA 38 7098996 0.985942427 9 35 343 0.933333333 1.447158031 0.316666667 0.394736842 0.616666667 38 3 1 56 X:7098972-7099092 6 18 5221 FBgn0029935 110.3333333 6.846666667 10.52 0.163141994 2.629016553 1.711026616 -7 -7 -7 0.1 dme-miR-283-5p 8mer-A1 TGATATTA X 7099063 7099070 - X_7099063_7099070_- 0.592190424 0.59219225 0.592191337 1.34E-06 CG4615 FBtr0071020 7098576 7099373 X - 7099048 7099082 3'utr CG4615 FlyBase G65352.1 TCAACTTTAACTTGATATTATTAGCGATATTCATA 12 7099071 0.808919566 2 11 125 1 1.146128036 0 0.166666667 0.285714286 12 0 0 14 X:7099048-7099082 8 CG4615 FBtr0071020 7098576 7099373 TGATATTA 8mer-A1 dme-miR-283-5p X - 7098972 7099092 3'utr CG4615 FlyBase G49213.1 CCTCTCCCTCTCAACTTTAACTTGATATTATTAGCGATATTCATATATTTAGTATCCATAACGACCCGTTTTGGCCATGTGTTTCTCAAAAGACTTTGAACCGTACTCAAAAGGCAAAGGA 38 7099071 0.985942427 9 35 343 0.933333333 1.447158031 0.316666667 0.394736842 0.616666667 38 3 1 56 X:7098972-7099092 8 13 5222 FBgn0029935 110.3333333 6.846666667 10.52 0.117824773 1.898734177 1.235741445 1 1 1 0.1 dme-miR-1006-3p 8mer-A1 CGAATTTA X 7099328 7099335 - X_7099328_7099335_- 0.665532508 0.657604642 0.661568575 0.005605872 CG4615 FBtr0071020 7098576 7099373 X - 7099294 7099352 3'utr CG4615 FlyBase G65354.1 GTTGTGGTAACATGCAGCGAATTTAGAACTTAGAGTACTTAACGACAGGGATTCGATGT 8 7099340 0.982082952 4 7 52 0.909090909 1 0.818181818 0.25 0.454545455 8 1 0 10 X:7099294-7099352 8 CG4615 FBtr0071020 7098576 7099373 CGAATTTA 8mer-A1 dme-miR-1006-3p X - 7099302 7099353 3'utr CG4615 FlyBase G49216.1 AGTTGTGGTAACATGCAGCGAATTTAGAACTTAGAGTACTTAACGACAGGGA 11 7099340 0.965538146 4 10 63 0.944444444 1.230448921 0.611111111 0.454545455 0.666666667 11 1 0 17 X:7099302-7099353 8 7 5223 FBgn0029935 110.3333333 6.846666667 10.52 0.063444109 1.022395326 0.66539924 5 5 5 0.1 dme-miR-263a-5p 8mer-m1 GTGCCATT X 7106600 7106607 - X_7106600_7106607_- 0.249204279 0.283004287 0.266104283 0.023900209 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 X - 7106533 7106651 3'utr fz4 FlyBase G65363.1 AAACGCAATTGCAATCGTAGCCGTAATGCCTAATTGTATTCAGTGTGCCATTAGCTTTAGGGACTTAACTGAAACGAGTCAATATCATGAAATTACCTTAAAAGAGTCCTTTTCCAGCA 189 7106601 0.837215011 15 178 1536 0.946188341 2.02325246 0.098654709 0.142857143 0.273542601 189 11 1 211 X:7106533-7106651 8 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 GTGCCATT 8mer-m1 dme-miR-263a-5p X - 7106506 7106644 3'utr fz4 FlyBase G49223.1 ATTGCAATCGTAGCCGTAATGCCTAATTGTATTCAGTGTGCCATTAGCTTTAGGGACTTAACTGAAACGAGTCAATATCATGAAATTACCTTAAAAGAGTCCTTTTCCAGCAACGAACTTTGGCGGAATTACTGAGGGT 139 7106601 0.986372923 15 129 1095 0.917030568 1.84509804 0.15720524 0.431654676 0.655021834 139 17 2 210 X:7106506-7106644 8 124 5224 FBgn0027342 197.34 6.033333333 9.256666667 0.62835715 20.55248619 13.39575081 -6 -6 -6 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA X 7106666 7106673 - X_7106666_7106673_- 0.500111086 0.500115057 0.500113071 2.83E-06 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 X - 7106655 7106702 3'utr fz4 FlyBase G65364.1 TGCTGTCTTCTCCCGATGCCGAAACAAGTGTACTTAACAATCGAAAAA 261 7106674 0.914030738 4 257 1204 0.99044586 2.191730393 0.207006369 0.16091954 0.302547771 261 2 1 311 X:7106655-7106702 8 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 GTACTTAA 8mer-A1 dme-miR-252-5p X - 7106654 7106702 3'utr fz4 FlyBase G49224.1 TGCTGTCTTCTCCCGATGCCGAAACAAGTGTACTTAACAATCGAAAAAA 165 7106674 0.9099972 5 162 763 0.988593156 2.414973348 0.19391635 0.43030303 0.642585551 165 3 0 260 X:7106654-7106702 8 208 5225 FBgn0027342 197.34 6.033333333 9.256666667 1.054018445 34.47513812 22.47029168 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA X 7106767 7106774 - X_7106767_7106774_- 0.650130257 0.65011735 0.650123804 9.19E-06 fz4 FBtr0071018|FBtr0071018|FBtr0071018|FBtr0071017|FBtr0071017|FBtr0071017 7106270|7106270|7106270|7106270|7106270|7106270 7107380|7107380|7107380|7107380|7107380|7107380 X - 7106737 7106793 3'utr fz4 FlyBase G65365.1 AACGCGCAGCAACCAAATACTGTGATACGCATGTTCATGTCTTCAAAAACAAAAAAA 70 7106776 0.954505714 6 66 265 0.939759036 1.892094603 0.301204819 0.171428571 0.301204819 70 5 0 78 X:7106737-7106793 8 fz4 FBtr0071018|FBtr0071018|FBtr0071018|FBtr0071017|FBtr0071017|FBtr0071017 7106270|7106270|7106270|7106270|7106270|7106270 7107380|7107380|7107380|7107380|7107380|7107380 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 7106755 7106798 3'utr fz4 FlyBase G49225.1 AGAGAAACGCGCAGCAACCAAATACTGTGATACGCATGTTCATG 33 7106776 0.929823187 3 28 104 0.847457627 1.22184875 0.271186441 0.484848485 0.711864407 33 7 2 50 X:7106755-7106798 8 50 5226 FBgn0027342 197.34 6.033333333 9.256666667 0.253369819 8.287292818 5.401512423 2 2 2 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA X 7106984 7106991 - X_7106984_7106991_- 0.500115519 0.500116684 0.500116102 8.49E-07 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 X - 7106967 7107012 3'utr fz4 FlyBase G65366.2 TCATATCCTATTTTCCTGTGTGTACTTAATGTTGCTCCTAATTAGT 158 7106992 0.808230906 8 146 1920 0.924324324 2.23299611 0.021621622 0.139240506 0.264864865 158 14 0 171 X:7106967-7107012 8 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 GTACTTAA 8mer-A1 dme-miR-252-5p X - 7106971 7107017 3'utr fz4 FlyBase G49227.1 GGGCTTCATATCCTATTTTCCTGTGTGTACTTAATGTTGCTCCTAAT 123 7106992 0.799816306 7 119 1476 0.967914439 2.257678575 0.026737968 0.390243902 0.598930481 123 6 0 181 X:7106971-7107017 8 140 5227 FBgn0027342 197.34 6.033333333 9.256666667 0.709435492 23.20441989 15.12423479 1 1 1 0.1 dme-miR-276a-3p 6mer2-7 GTTCCT X 7107318 7107323 - X_7107318_7107323_- 0.999853804 0.999974811 0.999914307 8.56E-05 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 X - 7107262 7107446 stop_codon fz4 FlyBase G65368.1 AAGTACAGCCAGCACGGCAGCTACTATCCCCACTTGCAGCAGTATGGCAATGAGACGCTACTCTAGACGGAATTGGATTAGGTACCATTTCAGGGCAGGAAATGCTTCCTGCTTCCAGTCAATGTTCCTGCAGCAGCTGCTGTGCCAAAGTCAATCCTCTACTATAACTTAATGCGGTTTCGGGT 61 7107324 0.977823112 19 56 369 0.927536232 1.806179974 0.101449275 0.114754098 0.217391304 61 5 0 64 X:7107262-7107446 6 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 GTTCCT 6mer2-7 dme-miR-276a-3p X - 7107297 7107378 3'utr fz4 FlyBase G49229.1 GGAATTGGATTAGGTACCATTTCAGGGCAGGAAATGCTTCCTGCTTCCAGTCAATGTTCCTGCAGCAGCTGCTGTGCCAAAG 32 7107324 0.981795499 8 28 203 0.924528302 1.69019608 0.169811321 0.34375 0.603773585 32 4 0 49 X:7107297-7107378 6 29.5 5228 FBgn0027342 197.34 6.033333333 9.256666667 0.149488193 4.889502762 3.18689233 1 1 1 0.1 dme-miR-33-5p 7mer-m8 CAATGCA X 7281196 7281202 - X_7281196_7281202_- 0.66202804 0.605609662 0.633818851 0.039893763 CG1677 FBtr0303415|FBtr0339819|FBtr0089712|FBtr0339820 7281087|7281087|7281087|7281087 7281438|7281438|7281438|7281438 X - 7281180 7281262 3'utr CG1677 FlyBase G65370.1 ATTCGCATCGTATTCGATATTGCCTTCGCCTGGGTGCAGCCGCTCGATCGCCATACAATTCAATGCATTTAGATTTAATAATC 53 7281203 0.990099778 12 50 506 0.948275862 1.740362689 0.103448276 0.094339623 0.172413793 53 3 0 55 X:7281180-7281262 7 CG1677 FBtr0089712|FBtr0339820|FBtr0303415|FBtr0339819 7281087|7281087|7281087|7281087 7281438|7281438|7281438|7281438 CAATGCA 7mer-m8 dme-miR-33-5p X - 7281133 7281248 3'utr CG1677 FlyBase G49232.1 CGATATTGCCTTCGCCTGGGTGCAGCCGCTCGATCGCCATACAATTCAATGCATTTAGATTTAATAATCATTATCCATTTTCCTACCCTGACTATTGCCAACTGAAGAGCATCAAT 51 7281195 0.985175751 15 38 397 0.784615385 1.707570176 0.138461538 0.254901961 0.415384615 51 14 0 51 X:7281133-7281248 7 37 5229 FBgn0029941 1454.373333 48.72333333 74.88666667 0.02544051 0.759389752 0.494079943 1 -7 -3 0.1 dme-miR-190-5p 7mer-m8 ACATATC X 7281310 7281316 - X_7281310_7281316_- 0.674510032 0.674514587 0.674512309 3.25E-06 CG1677 FBtr0303415|FBtr0339819|FBtr0089712|FBtr0339820 7281087|7281087|7281087|7281087 7281438|7281438|7281438|7281438 X - 7281289 7281313 3'utr CG1677 FlyBase G65371.1 TATCCGATGGATATCGGAACGGCAT 5 7281311 0.958736298 3 3 21 0.5 0.602059991 0 0.6 0.75 5 4 0 4 X:7281289-7281313 4 CG1677 FBtr0089712|FBtr0339820|FBtr0303415|FBtr0339819 7281087|7281087|7281087|7281087 7281438|7281438|7281438|7281438 ACATATC 7mer-m8 dme-miR-190-5p X - 7281288 7281316 3'utr CG1677 FlyBase G49233.1 ACATATCCGATGGATATCGGAACGGCATC 8 7281306 0.924665961 2 6 30 0.923076923 1.079181246 0 0.375 0.615384615 8 1 0 12 X:7281288-7281316 7 6.5 5230 FBgn0029941 1454.373333 48.72333333 74.88666667 0.004469279 0.133406308 0.086797828 -5 -10 -7.5 0.1 dme-bantam-3p 7mer-m8 TGATCTC X 7288893 7288899 - X_7288893_7288899_- 0.661615243 0.661615243 0.661615243 0 unc-119 FBtr0071066|FBtr0346619 7288678|7288365 7289145|7289145 X - 7288868 7288978 5'utr unc-119 FlyBase G65393.2 ATATTATCACAGCCATTTTAGCCTTAGCACACCAAAGTTTTACCCACCATTCCTGTTTGATGTATTTAGCATCAAGATATGATCTCCTGCAAACGGAAACTAACACACAAA 384 7288899 0.97740174 9 374 2174 0.975 2.369215857 0.05625 0.203125 0.3625 384 11 1 468 X:7288868-7288978 7 unc-119 FBtr0346619|FBtr0071066 7288365|7288678 7289145|7289145 TGATCTC 7mer-m8 dme-bantam-3p X - 7288873 7288946 5'utr unc-119 FlyBase G49250.2 CAAAGTTTTACCCACCATTCCTGTTTGATGTATTTAGCATCAAGATATGATCTCCTGCAAACGGAAACTAACAC 284 7288891 0.848882889 10 278 1575 0.972850679 2.633468456 0.076923077 0.383802817 0.604072398 284 12 0 430 X:7288873-7288946 7 327.5 5231 FBgn0025549 924.56 49.97333333 77.10666667 0.354222549 6.553495197 4.24736296 0 -8 -4 0.1 dme-miR-278-3p 6mer3-8 CCCACC X 7310662 7310667 + X_7310662_7310667_+ 0.999991008 0.999997331 0.999994169 4.45E-06 brk FBtr0071048 7310586 7311132 X + 7310632 7310722 3'utr brk FlyBase G59505.1 ACACACAATAGAAACTAAGGAAGCAGCAATCCCACCAATCGGATGTTATAATGGCAGTCACTGGGCCTGGCCTTTTAGTTCCCTAAGCCAT 284 7310683 0.948680829 15 277 1505 0.971518987 2.18610838 0.212025316 0.095070423 0.186708861 284 8 1 307 X:7310632-7310722 6 brk FBtr0071048 7310586 7311132 CCCACC 6mer3-8 dme-miR-278-3p X + 7310626 7310719 3'utr brk FlyBase G45001.1 AACAACACACACAATAGAAACTAAGGAAGCAGCAATCCCACCAATCGGATGTTATAATGGCAGTCACTGGGCCTGGCCTTTTAGTTCCCTAAGC 169 7310683 0.947540999 14 165 848 0.984375 2.100370545 0.26953125 0.366863905 0.58203125 169 3 1 252 X:7310626-7310719 6 97.5 5232 FBgn0024250 227.5733333 8.686666667 13.37 0.428433326 11.22409823 7.292445774 -21 -21 -21 0.1 dme-miR-7-5p 7mer-A1 TCTTCCA X 7310806 7310812 + X_7310806_7310812_+ 0.823260672 0.511519231 0.667389951 0.220434529 brk FBtr0071048 7310586 7311132 X + 7310775 7310837 3'utr brk FlyBase G59506.1 AAAAAATTGTATATCTAAGCGCAAACATATATCTTCCAAGCATATCAGCAAAAAAAACCCCAA 15 7310807 0.9674289 5 14 79 1 1.230448921 0 0.133333333 0.235294118 15 0 0 17 X:7310775-7310837 7 brk FBtr0071048 7310586 7311132 TCTTCCA 7mer-A1 dme-miR-7-5p X + 7310791 7310852 3'utr brk FlyBase G45002.1 AAGCGCAAACATATATCTTCCAAGCATATCAGCAAAAAAAACCCCAAACCCTAGGTATAAAC 15 7310807 0.97708675 5 12 72 0.869565217 1.301029996 0 0.333333333 0.565217391 15 3 0 20 X:7310791-7310852 7 13 5233 FBgn0024250 227.5733333 8.686666667 13.37 0.057124443 1.496546431 0.972326103 -1 -1 -1 0.1 dme-miR-308-3p 8mer-m1 CTGTGATT X 7328137 7328144 + X_7328137_7328144_+ 0.385559885 0.385560294 0.38556009 2.83E-07 Dok FBtr0071049 7327562 7328806 X + 7328114 7328344 3'utr Dok FlyBase G59524.1 GTTAATTATGTTAAATTCGTAATCTGTGATTGTATTGTTAATTGTGAAACTGTTACATTTTTAGCAAGCACTGCCCGCCACTTGATGATCGCACTCGAAAAATTCCCCCGGCTCTTACTTAAAATGTAGTGTTAAATTAAAGCAAGAGAAAAATGAAACTCAATCGAATCATGGACGTAACGAAAATTTACAAAATGTGTATGCGATTTATGCTAAATATATGTGTTTTTG 141 7328136 0.992598651 28 128 1472 0.904761905 2.181843588 0.369047619 0.177304965 0.30952381 141 16 0 152 X:7328114-7328344 8 Dok FBtr0071049 7327562 7328806 CTGTGATT 8mer-m1 dme-miR-308-3p X + 7328116 7328295 3'utr Dok FlyBase G45010.1 TAATTATGTTAAATTCGTAATCTGTGATTGTATTGTTAATTGTGAAACTGTTACATTTTTAGCAAGCACTGCCCGCCACTTGATGATCGCACTCGAAAAATTCCCCCGGCTCTTACTTAAAATGTAGTGTTAAATTAAAGCAAGAGAAAAATGAAACTCAATCGAATCATGGACGTAACG 108 7328136 0.999173397 20 97 1128 0.889570552 1.559308011 0.429447853 0.398148148 0.601226994 108 15 3 145 X:7328116-7328295 8 84 5234 FBgn0029944 523.09 18.16 27.87 0.160584221 4.625550661 3.013993541 1 1 1 0.1 dme-miR-308-3p 7mer-m1 TGTGATT X 758656 758662 + X_758656_758662_+ 0.520863568 0.521190343 0.521026956 0.000231012 CG5254 FBtr0070134|FBtr0343759 758553|758553 758719|758719 X + 758606 758671 3'utr CG5254 FlyBase G57841.1 AAGTCGATTAGTCGCGATCAATGCCATCAAGGGGATGCTACTCTTCCGATTGTGATTCGTCAATAA 47 758655 0.806305202 11 45 370 0.962264151 1.40654018 0.150943396 0.127659574 0.226415094 47 1 1 51 X:758606-758671 7 CG5254 FBtr0070134|FBtr0343759 758553|758553 758719|758719 TGTGATT 7mer-m1 dme-miR-308-3p X + 758596 758674 3'utr CG5254 FlyBase G43758.1 GTATAATAGTAAGTCGATTAGTCGCGATCAATGCCATCAAGGGGATGCTACTCTTCCGATTGTGATTCGTCAATAAATG 49 758655 0.971769121 7 49 380 1 1.886490725 0.181818182 0.326530612 0.571428571 49 0 0 77 X:758596-758674 7 35.5 5235 FBgn0040383 45.33333333 4.423333333 6.693333333 0.783088235 8.025621703 5.303784861 1 1 1 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 761419 761424 + X_761419_761424_+ 0.999990835 0.999995189 0.999993012 3.11E-06 CG5273 FBtr0070137|FBtr0070136|FBtr0070135 761360|761360|761360 761939|761939|761939 X + 761383 761454 3'utr CG5273 FlyBase G57843.1 CCACTGTGCACCCACTCAATTACCCGACTACCTACTGTACCTTCCTCCCCAGCTGTTGTGGCCTTGGCGCGC 91 761418 0.75859921 10 89 574 0.981132075 2.017033339 0.245283019 0.153846154 0.273584906 91 2 0 104 X:761383-761454 6 CG5273 FBtr0070135|FBtr0070137|FBtr0070136 761360|761360|761360 761939|761939|761939 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X + 761387 761481 3'utr CG5273 FlyBase G43760.1 TGTGCACCCACTCAATTACCCGACTACCTACTGTACCTTCCTCCCCAGCTGTTGTGGCCTTGGCGCGCATATTTGCGCTGACCAACATCGATAAT 52 761418 0.759215953 10 50 312 0.987179487 1.886490725 0.217948718 0.346153846 0.564102564 52 1 0 77 X:761387-761481 6 62 5236 FBgn0040382 52 2.953333333 4.456666667 1.192307692 20.99322799 13.91174271 1 1 1 0.1 dme-miR-8-3p 7mer-m8 CAGTATT X 761536 761542 + X_761536_761542_+ 0.661536082 0.661615243 0.661575663 5.59E-05 CG5273 FBtr0070137|FBtr0070136|FBtr0070135 761360|761360|761360 761939|761939|761939 X + 761507 761552 3'utr CG5273 FlyBase G57844.1 CTTGAATTATGCCGTACCATCTCCGACTACAGTATTTGTGGATAAA 9 761543 0.682774663 5 9 62 1 1 0.2 0.111111111 0.2 9 0 0 10 X:761507-761552 7 CG5273 FBtr0070135|FBtr0070137|FBtr0070136 761360|761360|761360 761939|761939|761939 CAGTATT 7mer-m8 dme-miR-8-3p X + 761496 761552 3'utr CG5273 FlyBase G43761.1 GGACAAAAACTCTTGAATTATGCCGTACCATCTCCGACTACAGTATTTGTGGATAAA 7 761543 0.982284897 6 7 53 1 0.84509804 0.428571429 0 0 7 0 0 7 X:761496-761552 7 5.5 5237 FBgn0040382 52 2.953333333 4.456666667 0.105769231 1.862302483 1.234106208 -7 -7 -7 0.1 dme-miR-308-3p 7mer-m1 TGTGATT X 761603 761609 + X_761603_761609_+ 0.521223855 0.521223855 0.521223855 0 CG5273 FBtr0070137|FBtr0070136|FBtr0070135 761360|761360|761360 761939|761939|761939 X + 761574 761631 3'utr CG5273 FlyBase G57845.1 AAGCCCCCTTTTCCAATTTGGCCTTCAATTGTGATTGTTGCGGTGTGCATGGGCCCCG 98 761602 0.691776247 10 92 1007 0.929824561 1.326335861 0.394736842 0.112244898 0.236842105 98 4 4 106 X:761574-761631 7 CG5273 FBtr0070135|FBtr0070137|FBtr0070136 761360|761360|761360 761939|761939|761939 TGTGATT 7mer-m1 dme-miR-308-3p X + 761575 761637 3'utr CG5273 FlyBase G43762.1 AGCCCCCTTTTCCAATTTGGCCTTCAATTGTGATTGTTGCGGTGTGCATGGGCCCCGTAACCG 57 761602 0.991493225 5 54 573 0.947368421 1.653212514 0.357894737 0.543859649 0.726315789 57 4 1 90 X:761575-761637 7 76.5 5238 FBgn0040382 52 2.953333333 4.456666667 1.471153846 25.90293454 17.16529544 1 1 1 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 761863 761868 + X_761863_761868_+ 0.501836283 0.468487455 0.485161869 0.023581163 CG5273 FBtr0070137|FBtr0070137|FBtr0070137|FBtr0070136|FBtr0070136|FBtr0070136|FBtr0070135|FBtr0070135|FBtr0070135 761360|761360|761360|761360|761360|761360|761360|761360|761360 761939|761939|761939|761939|761939|761939|761939|761939|761939 X + 761811 761908 3'utr CG5273 FlyBase G57848.1 AGTGTGTATTTTTCTAGACTTGTTAGCGTAATTGTTGCTTGTTTTTGTATTGCTGTGAGCAAACGTATTTGTTGCACTCTTCAATTGTTGAATAAAAT 43 761833 0.993005276 10 39 473 0.903846154 1.070037867 0.211538462 0.214285714 0.365384615 42 2 3 47 X:761811-761908 6 CG5273 FBtr0070135|FBtr0070135|FBtr0070135|FBtr0070137|FBtr0070137|FBtr0070137|FBtr0070136|FBtr0070136|FBtr0070136 761360|761360|761360|761360|761360|761360|761360|761360|761360 761939|761939|761939|761939|761939|761939|761939|761939|761939 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X + 761797 761886 3'utr CG5273 FlyBase G43764.2 AAGTTCCCACTAAAAGTGTGTATTTTTCTAGACTTGTTAGCGTAATTGTTGCTTGTTTTTGTATTGCTGTGAGCAAACGTATTTGTTGCA 35 761833 0.990952476 11 33 355 0.94 1.672097858 0.22 0.371428571 0.56 35 3 0 47 X:761797-761886 6 13 5239 FBgn0040382 52 2.953333333 4.456666667 0.25 4.401805869 2.91697831 30 30 30 0.1 dme-miR-308-3p 7mer-m1 TGTGATT X 7674693 7674699 + X_7674693_7674699_+ 0.521223828 0.521223812 0.52122382 0 ct FBtr0305134|FBtr0114613|FBtr0331733|FBtr0071068 7674616|7674616|7674616|7674616 7678259|7678259|7678859|7678259 X + 7674621 7674744 3'utr ct FlyBase G59555.1 AAAAAAATTAACAGAACTAAATATAAATTCAGTGCAATGTGTAGAGAAGCGGAGATGGTTAACGCGTTTACTTGTGATTAAGTTTGAATGTTTAGACGATGTGAGGAGCCAGGAGACATACATA 63 7674692 0.937190466 16 56 444 0.903614458 1.273001272 0.313253012 0.26984127 0.445783133 63 5 3 75 X:7674621-7674744 7 ct FBtr0331733|FBtr0071068|FBtr0305134|FBtr0114613 7674616|7674616|7674616|7674616 7678859|7678259|7678259|7678259 TGTGATT 7mer-m1 dme-miR-308-3p X + 7674633 7674749 3'utr ct FlyBase G45026.1 AGAACTAAATATAAATTCAGTGCAATGTGTAGAGAAGCGGAGATGGTTAACGCGTTTACTTGTGATTAAGTTTGAATGTTTAGACGATGTGAGGAGCCAGGAGACATACATACATAT 37 7674692 0.985683366 11 33 271 0.868852459 1.72427587 0.409836066 0.432432432 0.655737705 37 8 0 53 X:7674633-7674749 7 28 5240 FBgn0004198 1981.64 22.68666667 34.95666667 0.014129711 1.234205113 0.800991704 1 1 1 0.1 dme-miR-14-3p 7mer-m8 AAGACTG X 7675081 7675087 + X_7675081_7675087_+ 0.668895232 0.666323264 0.667609248 0.001818608 ct FBtr0305134|FBtr0114613|FBtr0331733|FBtr0071068 7674616|7674616|7674616|7674616 7678259|7678259|7678859|7678259 X + 7675061 7675114 3'utr ct FlyBase G59558.1 TTTCGATTTGTTTCTACTTGAAGACTGTAAGCAAAGGCGGTAGGATTGATAACT 27 7675079 0.755817829 9 23 177 0.862068966 1.397940009 0.344827586 0.037037037 0.103448276 27 4 0 25 X:7675061-7675114 7 ct FBtr0331733|FBtr0071068|FBtr0305134|FBtr0114613 7674616|7674616|7674616|7674616 7678859|7678259|7678259|7678259 AAGACTG 7mer-m8 dme-miR-14-3p X + 7675064 7675101 3'utr ct FlyBase G45028.1 CGATTTGTTTCTACTTGAAGACTGTAAGCAAAGGCGGT 13 7675078 0.965829158 6 12 81 0.947368421 1.255272505 0.368421053 0.307692308 0.526315789 13 1 0 18 X:7675064-7675101 7 18.5 5241 FBgn0004198 1981.64 22.68666667 34.95666667 0.009335702 0.81545695 0.529226662 2 3 2.5 0.1 dme-bantam-3p 8mer-A1 TGATCTCA X 7675334 7675341 + X_7675334_7675341_+ 0.631136378 0.631136383 0.631136381 0 ct FBtr0305134|FBtr0114613|FBtr0331733|FBtr0071068 7674616|7674616|7674616|7674616 7678259|7678259|7678859|7678259 X + 7675308 7675352 3'utr ct FlyBase G59559.1 AGCAACCGACTTGTTTAACTATCTTTTGATCTCAAGCAAAAAAAC 101 7675333 0.671724459 7 94 893 0.920634921 1.462397998 0.079365079 0.207920792 0.365079365 101 7 3 116 X:7675308-7675352 8 ct FBtr0331733|FBtr0071068|FBtr0305134|FBtr0114613 7674616|7674616|7674616|7674616 7678859|7678259|7678259|7678259 TGATCTCA 8mer-A1 dme-bantam-3p X + 7675307 7675354 3'utr ct FlyBase G45029.1 CAGCAACCGACTTGTTTAACTATCTTTTGATCTCAAGCAAAAAAACAA 64 7675333 0.97423803 8 60 507 0.944444444 1.62838893 0.033333333 0.34375 0.533333333 64 4 1 85 X:7675307-7675354 8 80 5242 FBgn0004198 1981.64 22.68666667 34.95666667 0.040370602 3.526300323 2.288547726 1 1 1 0.1 dme-miR-1012-3p 7mer-A1 TGACTAA X 7683998 7684004 - X_7683998_7684004_- 0.782576562 0.733038795 0.757807678 0.035028514 CHES-1-like FBtr0112946|FBtr0310287|FBtr0333203 7683456|7682336|7683456 7685914|7685914|7685914 X - 7683972 7684034 3'utr CHES-1-like FlyBase G65412.1 TGCCTTGATGCATATTTTGGGGAAAGAATGTGACTAAAATACCAGAAGCGAGAACAACAAAAT 33 7684006 0.972380031 4 32 189 0.975 1.591064607 0.25 0.121212121 0.275 33 1 0 39 X:7683972-7684034 7 CHES-1-like FBtr0310287|FBtr0333203|FBtr0112946 7682336|7683456|7683456 7685914|7685914|7685914 TGACTAA 7mer-A1 dme-miR-1012-3p X - 7683982 7684050 3'utr CHES-1-like FlyBase G49261.1 AATTACATAAAAATATTGCCTTGATGCATATTTTGGGGAAAGAATGTGACTAAAATACCAGAAGCGAGA 30 7684006 0.9206675 6 28 165 0.977272727 1.633468456 0.477272727 0.233333333 0.477272727 30 1 0 43 X:7683982-7684050 7 28 5243 FBgn0029504 1761.533333 36.18333333 55.28333333 0.015895243 0.773836942 0.506481761 2 2 2 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 7684309 7684314 - X_7684309_7684314_- 1 1 1 0 CHES-1-like FBtr0112946|FBtr0310287|FBtr0333203 7683456|7682336|7683456 7685914|7685914|7685914 X - 7684251 7684363 3'utr CHES-1-like FlyBase G65414.1 CGAAAGGAAAAAAACTTGACAAAGAACGCCCTAAGTGTTTACACTTCATGTACCTTTTTAGCAAAAAGCAAAAAACGCAAAAGCAAAGATCGCATTAAAATTGTATACATACA 266 7684315 0.989886426 10 259 2554 0.975384615 1.898999271 0.101538462 0.191729323 0.338461538 266 5 3 317 X:7684251-7684363 6 CHES-1-like FBtr0310287|FBtr0333203|FBtr0112946 7682336|7683456|7683456 7685914|7685914|7685914 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X - 7684291 7684360 3'utr CHES-1-like FlyBase G49263.1 AAGGAAAAAAACTTGACAAAGAACGCCCTAAGTGTTTACACTTCATGTACCTTTTTAGCAAAAAGCAAAA 145 7684315 0.968389814 7 139 1381 0.963133641 1.621176282 0.119815668 0.35862069 0.571428571 145 4 4 209 X:7684291-7684360 6 198 5244 FBgn0029504 1761.533333 36.18333333 55.28333333 0.112402074 5.472132658 3.581549593 1 1 1 0.1 dme-miR-980-5p 6mer2-7 AAAAAC X 7684821 7684826 - X_7684821_7684826_- 0.765201053 0.819328586 0.792264819 0.038273922 CHES-1-like FBtr0112946|FBtr0310287|FBtr0333203 7683456|7682336|7683456 7685914|7685914|7685914 X - 7684750 7684860 3'utr CHES-1-like FlyBase G65416.1 CACATTTAGCGCCTTATATATGGAGTCCTTAGCTAAAAACGAAAGAGAGAAAATGTTGAATTGTTTGAACTGCTTTGTTATACGAATGCATGAGTACATATATATATATAT 21 7684832 0.982409308 11 20 158 0.965517241 1.447158031 0 0.333333333 0.517241379 21 1 0 28 X:7684750-7684860 6 CHES-1-like FBtr0310287|FBtr0333203|FBtr0112946 7682336|7683456|7683456 7685914|7685914|7685914 AAAAAC 6mer2-7 dme-miR-980-5p X - 7684781 7684852 3'utr CHES-1-like FlyBase G49266.1 GCGCCTTATATATGGAGTCCTTAGCTAAAAACGAAAGAGAGAAAATGTTGAATTGTTTGAACTGCTTTGTTA 19 7684832 0.968862603 5 19 125 1 1.556302501 0.305555556 0.631578947 0.805555556 19 0 0 36 X:7684781-7684852 6 9.5 5245 FBgn0029504 1761.533333 36.18333333 55.28333333 0.005393029 0.262551819 0.171842026 6 6 6 0.1 dme-bantam-3p 6mer3-8 TGATCT X 7684962 7684967 - X_7684962_7684967_- 0.882575227 0.922955643 0.902765435 0.028553255 CHES-1-like FBtr0112946|FBtr0071079|FBtr0310287|FBtr0333203 7683456|7684885|7682336|7683456 7685914|7685914|7685914|7685914 X - 7684935 7684990 3'utr CHES-1-like FlyBase G65417.1 AGATCCAAAACACCCTACTTACATGATCTAAAAACAAGCGATATAAAAATATATAC 19 7684967 0.963327577 5 18 97 0.95 0.977723605 0 0.052631579 0.1 19 0 1 19 X:7684935-7684990 6 CHES-1-like FBtr0310287|FBtr0333203|FBtr0112946|FBtr0071079 7682336|7683456|7683456|7684885 7685914|7685914|7685914|7685914 TGATCT 6mer3-8 dme-bantam-3p X - 7684941 7684991 3'utr CHES-1-like FlyBase G49267.1 AAGATCCAAAACACCCTACTTACATGATCTAAAAACAAGCGATATAAAAAT 15 7684968 0.683008575 3 12 73 0.807692308 1.322219295 0.076923077 0.466666667 0.692307692 15 5 0 21 X:7684941-7684991 6 16 5246 FBgn0029504 1761.533333 36.18333333 55.28333333 0.009082996 0.442192538 0.289418149 0 1 0.5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 7685585 7685590 - X_7685585_7685590_- 0.999996881 0.880636807 0.940316844 0.084400336 CHES-1-like FBtr0112946|FBtr0112946|FBtr0112946|FBtr0071079|FBtr0071079|FBtr0071079|FBtr0310287|FBtr0310287|FBtr0310287|FBtr0333203|FBtr0333203|FBtr0333203 7683456|7683456|7683456|7684885|7684885|7684885|7682336|7682336|7682336|7683456|7683456|7683456 7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914 X - 7685564 7685602 3'utr CHES-1-like FlyBase G65419.1 AGGATTTTTTTTCTGTGACTTTACTGTGCCCCGCAATTA 7 7685592 0.99353295 5 7 78 1 1 0.2 0.428571429 0.6 7 0 0 10 X:7685564-7685602 6 CHES-1-like FBtr0310287|FBtr0310287|FBtr0310287|FBtr0333203|FBtr0333203|FBtr0333203|FBtr0112946|FBtr0112946|FBtr0112946|FBtr0071079|FBtr0071079|FBtr0071079 7682336|7682336|7682336|7683456|7683456|7683456|7683456|7683456|7683456|7684885|7684885|7684885 7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X - 7685564 7685605 3'utr CHES-1-like FlyBase G49269.1 TTTAGGATTTTTTTTCTGTGACTTTACTGTGCCCCGCAATTA 13 7685592 0.982777924 6 11 136 1 1.278753601 0.210526316 0.307692308 0.526315789 13 0 0 19 X:7685564-7685605 6 9 5247 FBgn0029504 1761.533333 36.18333333 55.28333333 0.005109185 0.248733303 0.162797709 2 2 2 0.1 dme-miR-277-3p 7mer-A1 GCATTTA X 7685766 7685772 - X_7685766_7685772_- 0.820230467 0.821602625 0.820916546 0.000970221 CHES-1-like FBtr0112946|FBtr0071079|FBtr0310287|FBtr0333203 7683456|7684885|7682336|7683456 7685914|7685914|7685914|7685914 X - 7685742 7685850 3'utr CHES-1-like FlyBase G65420.1 CGCCCCCGCCCATACGCCCTCCCGCCCATGCGATCTGTTGTTGTCTCTTTCTAAAGCAAAAATTGTTCAAATCACAGAGCATTTAGACTAAATTTTGTAATCTTAGCAA 164 7685768 0.836038764 17 157 1099 0.964285714 2.276461804 0.020408163 0.152439024 0.290816327 164 7 0 189 X:7685742-7685850 7 CHES-1-like FBtr0310287|FBtr0333203|FBtr0112946|FBtr0071079 7682336|7683456|7683456|7684885 7685914|7685914|7685914|7685914 GCATTTA 7mer-A1 dme-miR-277-3p X - 7685735 7685851 3'utr CHES-1-like FlyBase G49270.1 ACGCCCCCGCCCATACGCCCTCCCGCCCATGCGATCTGTTGTTGTCTCTTTCTAAAGCAAAAATTGTTCAAATCACAGAGCATTTAGACTAAATTTTGTAATCTTAGCAAGTTCATA 93 7685768 0.954212631 14 90 631 0.979020979 2.146128036 0.034965035 0.408602151 0.615384615 93 3 0 140 X:7685735-7685851 7 98.5 5248 FBgn0029504 1761.533333 36.18333333 55.28333333 0.055917193 2.722247812 1.781730479 -4 -4 -4 0.1 dme-miR-190-5p 6mer3-8 ACATAT X 7726119 7726124 - X_7726119_7726124_- 0.999999737 0.999993309 0.999996523 4.53E-06 NELF-B FBtr0071077 7725994 7726358 X - 7726034 7726186 3'utr NELF-B FlyBase G65430.2 ATAATAATTCTACTGTTTAGACTAAACATAAAGCACTGCGACCGAGCAATCGGATATAGTTTACATATTTACAGAATGTATGGCTTTGTTGGCAGGCATCAATCAGTTGTCGCTGGCTATTATATATATTATATATTACTGTTACGCTAGTGT 32 7726107 0.834899757 14 28 244 0.948717949 1.568201724 0.128205128 0.15625 0.307692308 32 2 0 37 X:7726034-7726186 6 NELF-B FBtr0071077 7725994 7726358 ACATAT 6mer3-8 dme-miR-190-5p X - 7726084 7726176 3'utr NELF-B FlyBase G49276.1 TACTGTTTAGACTAAACATAAAGCACTGCGACCGAGCAATCGGATATAGTTTACATATTTACAGAATGTATGGCTTTGTTGGCAGGCATCAAT 16 7726110 0.987861642 7 14 118 0.884615385 1.361727836 0.192307692 0.5625 0.730769231 16 3 0 23 X:7726084-7726176 6 4 5249 FBgn0027553 119.3333333 6.51 9.91 0.033519553 0.614439324 0.403632694 -17 -14 -15.5 0.1 dme-miR-11-3p 7mer-m1 TGTGATG X 7726296 7726302 - X_7726296_7726302_- 0.582151072 0.506544455 0.544347764 0.05346194 NELF-B FBtr0071077 7725994 7726358 X - 7726286 7726320 3'utr NELF-B FlyBase G65431.2 CGGATGATGATGGTTATTTGTGATGATGATGTTGA 20 7726304 0.669886148 3 18 182 0.923076923 1.079181246 0.615384615 0.2 0.384615385 20 1 1 24 X:7726286-7726320 7 NELF-B FBtr0071077 7725994 7726358 TGTGATG 7mer-m1 dme-miR-11-3p X - 7726259 7726331 3'utr NELF-B FlyBase G49277.1 GCGGCTGTCGTCGGATGATGATGGTTATTTGTGATGATGATGTTGATGTTGATGATGATGATCGGAGGCCATG 16 7726304 0.987456345 8 16 147 1 1.447158031 0.571428571 0.4375 0.678571429 16 0 0 28 X:7726259-7726331 7 16 5250 FBgn0027553 119.3333333 6.51 9.91 0.134078212 2.457757296 1.614530777 2 2 2 0.1 dme-miR-79-3p 8mer-A1 TAGCTTTA X 7731283 7731290 + X_7731283_7731290_+ 0.625361581 0.625361566 0.625361573 0 CG12155 FBtr0071071 7731144 7731729 X + 7731255 7731350 3'utr CG12155 FlyBase G59573.1 CAAGTTCGTGGATTCCGCGTTCTTCAATTAGCTTTATCCTCCACCCACGAAACCCCGGATCCCTGTATCCTTCACCCCTCTACACCATCCATTCGA 107 7731282 0.814626075 8 104 1026 0.965811966 1.752048448 0.042735043 0.08411215 0.162393162 107 3 1 113 X:7731255-7731350 8 CG12155 FBtr0071071 7731144 7731729 TAGCTTTA 8mer-A1 dme-miR-79-3p X + 7731218 7731303 3'utr CG12155 FlyBase G45038.1 ATGTATAGGATTAGGATGCGTACCGTTTACCAGTTTGCAAGTTCGTGGATTCCGCGTTCTTCAATTAGCTTTATCCTCCACCCACG 46 7731282 0.990999509 5 43 450 0.935483871 1.286306739 0.096774194 0.260869565 0.451612903 46 2 2 58 X:7731218-7731303 8 72 5251 FBgn0029957 249.8233333 11.22666667 17.11333333 0.288203664 6.413301663 4.207245812 1 1 1 0.1 dme-bantam-3p 6mer3-8 TGATCT X 7731482 7731487 + X_7731482_7731487_+ 0.999821425 0.999999012 0.999910218 0.000125582 CG12155 FBtr0071071 7731144 7731729 X + 7731442 7731526 3'utr CG12155 FlyBase G59574.1 ATTCGAAATTCTTAAAGTTGAATAGCTTGTTTGCAACAGATGATCTATACCTAAGTCTTAGGATTATCCTGGTTTCCCCCCCGTT 12 7731482 0.980772549 5 12 87 1 1.113943352 0.076923077 0.083333333 0.153846154 12 0 0 13 X:7731442-7731526 6 CG12155 FBtr0071071 7731144 7731729 TGATCT 6mer3-8 dme-bantam-3p X + 7731461 7731498 3'utr CG12155 FlyBase G45039.1 GAATAGCTTGTTTGCAACAGATGATCTATACCTAAGTC 6 7731482 0.879340714 2 5 39 0.9 0.954242509 0 0.5 0.7 6 1 0 9 X:7731461-7731498 6 6 5252 FBgn0029957 249.8233333 11.22666667 17.11333333 0.024016972 0.534441805 0.350603818 0 0 0 0.1 dme-miR-34-5p 6mer2-7 ACTGCC X 7896695 7896700 + X_7896695_7896700_+ 0.999999986 0.999999948 0.999999967 7.07E-08 p115 FBtr0071089|FBtr0340162 7896636|7896636 7896786|7896991 X + 7896672 7896711 3'utr p115 FlyBase G59609.2 ATGTTACAACTGGAAATTGCTCGACTGCCCTAAAAACGTT 35 7896691 0.671608008 7 28 170 0.829268293 0.929418926 0.024390244 0.114285714 0.243902439 35 4 3 34 X:7896672-7896711 6 p115 FBtr0071089|FBtr0340162 7896636|7896636 7896786|7896991 ACTGCC 6mer2-7 dme-miR-34-5p X + 7896649 7896708 3'utr p115 FlyBase G45057.1 CGGATGAGTTGCTAGCCACGTACATGTTACAACTGGAAATTGCTCGACTGCCCTAAAAAC 28 7896690 0.971030347 6 25 144 0.885714286 0.792391689 0 0.214285714 0.371428571 28 0 4 31 X:7896649-7896708 6 28.5 5253 FBgn0040087 268.6666667 11.33 17.27666667 0.106079404 2.515445719 1.64962377 4 5 4.5 0.1 dme-miR-282-5p 6mer2-7 GAGGCT X 7918075 7918080 + X_7918075_7918080_+ 0.999995629 0.999906761 0.999951195 6.28E-05 snz FBtr0340148 7917322 7918444 X + 7918059 7918111 3'utr snz FlyBase G59652.1 AGACTAAGCGTTGATTGAGGCTGTCTTAAAAAACAGAACGTTTGATAACACAA 13 7918073 0.981191067 6 12 83 0.944444444 1.230448921 0.111111111 0.307692308 0.5 13 1 0 17 X:7918059-7918111 6 snz FBtr0340148 7917322 7918444 GAGGCT 6mer2-7 dme-miR-282-5p X + 7918018 7918096 3'utr snz FlyBase G45097.1 CCTAATTGACCAAAATTGGTAATGGTATCAAATAATCTTAAAGACTAAGCGTTGATTGAGGCTGTCTTAAAAAACAGAA 10 7918073 0.982909668 5 10 78 1 1.113943352 0 0.3 0.461538462 10 0 0 13 X:7918018-7918096 6 9.5 5254 FBgn0029976 1160.15 26.41 40.25666667 0.008188596 0.35971223 0.235985758 2 2 2 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA X 7921540 7921545 + X_7921540_7921545_+ 0.99999999 1 0.999999995 0 Ykt6 FBtr0071093 7921363 7921966 X + 7921513 7921557 3'utr Ykt6 FlyBase G59657.1 TCCAAGGGAGCGGTGCGACTTGGGCTTTGATGATTGCTTTTTATA 9 7921553 0.986336974 6 9 81 1 0.954242509 0.111111111 0 0 9 0 0 9 X:7921513-7921557 6 Ykt6 FBtr0071093 7921363 7921966 TGATGA 6mer3-8 dme-miR-2a-2-5p X + 7921502 7921564 3'utr Ykt6 FlyBase G45102.1 ACCAAACAAACTCCAAGGGAGCGGTGCGACTTGGGCTTTGATGATTGCTTTTTATAAATGAAT 11 7921533 0.984549538 6 10 82 1 1.255272505 0.111111111 0.454545455 0.666666667 11 0 0 18 X:7921502-7921564 6 5.5 5255 FBgn0260858 601.62 50.32 77.46 0.009141983 0.109300477 0.071004389 -13 7 -3 0.1 dme-miR-965-3p 7mer-m8 TACGCTT X 7921678 7921684 + X_7921678_7921684_+ 0.620156879 0.620204855 0.620180867 3.39E-05 Ykt6 FBtr0071093 7921363 7921966 X + 7921667 7921705 3'utr Ykt6 FlyBase G59658.1 CTGTATATGTCTACGCTTTGGATATCTAAATGTTAATTA 26 7921685 0.741762841 5 25 216 0.975 1.591064607 0.025 0.461538462 0.65 26 1 0 39 X:7921667-7921705 7 Ykt6 FBtr0071093 7921363 7921966 TACGCTT 7mer-m8 dme-miR-965-3p X + 7921663 7921697 3'utr Ykt6 FlyBase G45103.1 CTGTCTGTATATGTCTACGCTTTGGATATCTAAAT 12 7921685 0.648547452 3 12 103 1 1.278753601 0 0.5 0.684210526 12 0 0 19 X:7921663-7921697 7 19 5256 FBgn0260858 601.62 50.32 77.46 0.031581397 0.377583466 0.245287891 -7 -7 -7 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 7922994 7923000 - X_7922994_7923000_- 0.78110794 0.78135276 0.78123035 0.00017317 CG10777 FBtr0071132|FBtr0071132|FBtr0071132 7922156|7922156|7922156 7927227|7927227|7927227 X - 7922982 7923020 3'utr CG10777 FlyBase G65464.1 AAGTTGAAACCAAAACCCATTGTGATAACAGCTGCGTAA 51 7923001 0.861246483 3 48 219 0.945454545 1.238882089 0.036363636 0.078431373 0.145454545 51 1 2 52 X:7922982-7923020 7 CG10777 FBtr0071132|FBtr0071132|FBtr0071132 7922156|7922156|7922156 7927227|7927227|7927227 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 7922951 7923017 3'utr CG10777 FlyBase G49299.1 TTGAAACCAAAACCCATTGTGATAACAGCTGCGTAAACGAAACACGTTAGAACCTTACTTGTACGTA 34 7923001 0.941499744 3 32 131 0.960784314 1.213074825 0.078431373 0.411764706 0.607843137 34 0 2 49 X:7922951-7923017 7 41.5 5257 FBgn0029979 3423.163333 51.95333333 79.74333333 0.012123289 0.798793789 0.52041968 1 1 1 0.1 dme-bantam-3p 6mer2-7 GATCTC X 7924792 7924797 - X_7924792_7924797_- 0.950131104 0.957536655 0.953833879 0.00523655 CG10777 FBtr0344137|FBtr0071132 7924137|7922156 7927227|7927227 X - 7924715 7924864 3'utr CG10777 FlyBase G65470.1 AAATAAATAAAAATCGGGGAAAACAAACGGAAATATTTATATATGTAGGGTATATCGTCAACACAAGGATCTCTTTTTAAAGCAAACGAACGGAAGACTCGAATTCTTCTATATAGACCTATAATTCATAGAGAAGCTCGCTTTTATTTC 405 7924791 0.936620353 19 391 2899 0.967935872 1.90579588 0.172344689 0.192592593 0.344689379 405 11 5 483 X:7924715-7924864 6 CG10777 FBtr0071132|FBtr0344137 7922156|7924137 7927227|7927227 GATCTC 6mer2-7 dme-bantam-3p X - 7924766 7924900 3'utr CG10777 FlyBase G49306.1 TGTATAAGTTCTCTACGTATACGGTTTCTTTTTAGCAAATAAATAAAAATCGGGGAAAACAAACGGAAATATTTATATATGTAGGGTATATCGTCAACACAAGGATCTCTTTTTAAAGCAAACGAACGGAAGACT 286 7924790 0.982719748 18 277 2083 0.965909091 2.62838893 0.106818182 0.388111888 0.602272727 286 15 0 425 X:7924766-7924900 6 325 5258 FBgn0029979 3423.163333 51.95333333 79.74333333 0.094941424 6.255614013 4.075575806 -6 -7 -6.5 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT X 7925176 7925182 - X_7925176_7925182_- 0.658999338 0.658999286 0.658999312 0 CG10777 FBtr0344137|FBtr0071132 7924137|7922156 7927227|7927227 X - 7925147 7925210 3'utr CG10777 FlyBase G65472.1 GAGTAAATTAGTAGTAGTAACATTAATTGGCAGCTCCAGTCATATAGTTAGCAGTAATATATCC 750 7925184 0.821555035 10 731 5949 0.972619048 2.213252052 0.082142857 0.106666667 0.202380952 750 19 4 817 X:7925147-7925210 7 CG10777 FBtr0071132|FBtr0344137 7922156|7924137 7927227|7927227 GGCAGCT 7mer-m8 dme-miR-980-3p X - 7925119 7925210 3'utr CG10777 FlyBase G49308.1 GAGTAAATTAGTAGTAGTAACATTAATTGGCAGCTCCAGTCATATAGTTAGCAGTAATATATCCATATATCGTCTGTTCAAGCAGTTGTCCA 547 7925184 0.983931593 11 536 4195 0.978773585 2.317018101 0.091981132 0.402193784 0.614386792 547 15 3 830 X:7925119-7925210 7 639 5259 FBgn0029979 3423.163333 51.95333333 79.74333333 0.186669445 12.29949955 8.013209046 2 2 2 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC X 7926874 7926880 - X_7926874_7926880_- 0.66161547 0.661615645 0.661615557 7.07E-08 CG10777 FBtr0344137|FBtr0071132 7924137|7922156 7927227|7927227 X - 7926853 7926946 5'utr CG10777 FlyBase G65475.1 ACCAAAATCGTTGCCTTTTTGTTTCTATATTTATTCACACCTCACTACTAATATTAGTAGAACATTTGTGTTCTCTTTCGCTTATTTAAGCATT 18 7926881 0.92980884 7 18 193 1 1.380211242 0 0.333333333 0.5 18 0 0 24 X:7926853-7926946 7 CG10777 FBtr0071132|FBtr0344137 7922156|7924137 7927227|7927227 TGTGTTC 7mer-m8 dme-miR-317-3p X - 7926857 7926893 5'utr CG10777 FlyBase G49309.1 TTAGTAGAACATTTGTGTTCTCTTTCGCTTATTTAAG 6 7926881 0.983584543 3 6 64 1 0.954242509 0.111111111 0.333333333 0.555555556 6 0 0 9 X:7926857-7926893 7 9.5 5260 FBgn0029979 3423.163333 51.95333333 79.74333333 0.002775211 0.18285641 0.119132216 1 1 1 0.1 dme-miR-184-5p 7mer-m8 TGATAAG X 7931759 7931765 - X_7931759_7931765_- 0.378290688 0.653374089 0.515832388 0.194513338 CG10778 FBtr0071131|FBtr0331433 7931743|7931743 7932048|7932048 X - 7931756 7931792 3'utr CG10778 FlyBase G65488.1 GGTCGTAAAAAGTGTTTGCCTTCCATTTGATAAGTAA 11 7931777 0.957467702 5 11 97 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 X:7931756-7931792 7 CG10778 FBtr0331433|FBtr0071131 7931743|7931743 7932048|7932048 TGATAAG 7mer-m8 dme-miR-184-5p X - 7931763 7931792 3'utr CG10778 FlyBase G49319.1 GGTCGTAAAAAGTGTTTGCCTTCCATTTGA 11 7931776 0.677871643 3 11 93 1 1.301029996 0.1 0.545454545 0.75 11 0 0 20 X:7931763-7931792 2 11 5261 FBgn0029980 75 7.353333333 11.31333333 0.146666667 1.495920218 0.972304066 12 11 11.5 0.1 dme-miR-33-5p 6mer2-7 AATGCA X 7953124 7953129 + X_7953124_7953129_+ 0.963141331 0.987772424 0.975456877 0.017416818 CG42593 FBtr0301748|FBtr0331298|FBtr0331299 7952244|7952295|7952244 7953883|7953883|7953883 X + 7953099 7953175 3'utr CG42593 FlyBase G59695.1 ACAATAAACGAAAAGCGAATTGTGAAATGCATAGAAACTAGTTTGCATGCCCCATTATACATAAATATTATGTAATT 258 7953118 0.822940245 7 254 979 0.981308411 2.498310554 0.23364486 0.201550388 0.358255452 258 6 0 315 X:7953099-7953175 6 CG42593 FBtr0331299|FBtr0331298|FBtr0301748 7952244|7952295|7952244 7953883|7953883|7953883 AATGCA 6mer2-7 dme-miR-33-5p X + 7953057 7953160 3'utr CG42593 FlyBase G45130.1 ATTGCAACATAAACGAAAAATGATACAAAAAAAAAAAAAAAAACAATAAACGAAAAGCGAATTGTGAAATGCATAGAAACTAGTTTGCATGCCCCATTATACAT 207 7953118 0.935431087 8 203 772 0.986531987 2.165837625 0.259259259 0.29468599 0.508417508 207 3 1 293 X:7953057-7953160 6 228.5 5262 FBgn0260970 1474.483333 18.93666667 29.07666667 0.154969537 12.06653758 7.858534908 6 6 6 0.1 dme-miR-304-5p 8mer-A1 TGAGATTA X 8039152 8039159 - X_8039152_8039159_- 0.625293891 0.625330171 0.625312031 2.57E-05 fs(1)h FBtr0071119|FBtr0333307 8038789|8037806 8040978|8040978 X - 8039141 8039193 3'utr fs(1)h FlyBase G65542.1 AAGAGCGATGAATTGTGGAACTGCAGGGTGTGGTTGAGATTAGGGATGCGTGT 15 8039160 0.731731998 4 15 101 1 1.176091259 0.4 0 0 15 0 0 15 X:8039141-8039193 8 fs(1)h FBtr0333307|FBtr0071119 8037806|8038789 8040978|8040978 TGAGATTA 8mer-A1 dme-miR-304-5p X - 8039131 8039177 3'utr fs(1)h FlyBase G49356.1 GGAACTGCAGGGTGTGGTTGAGATTAGGGATGCGTGTTTGTCTTTGT 5 8039160 0.981040276 3 4 36 0.9 0.954242509 0.4 0.4 0.7 5 1 0 9 X:8039131-8039177 8 7.5 5263 FBgn0004656 6894.06 89.92333333 138.4833333 0.001087893 0.083404382 0.054158142 1 1 1 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG X 8040319 8040324 - X_8040319_8040324_- 0.999999997 0.999999999 0.999999998 0 fs(1)h FBtr0071119|FBtr0333307 8038789|8037806 8040978|8040978 X - 8040256 8040469 3'utr fs(1)h FlyBase G65547.1 AAAAAAAATGGCAAATTTCCTTCGGTTAGCAAATGATTCTTCGCAATTTTTTTAAAAATCACTTACCATCTCGCTTATTATTTTGTATTAAAATTACGATTATGATGATAATGGATCGTGGCGACAAAGATGTCCGCACATGTTTCCAAAGCTTATTATTTTTAATATTATTGATTGCCTAGGCAAGTTTAGTTCGTAGGTATACACTTAATTG 59 8040327 0.854125527 29 55 523 0.893333333 1.826074803 0.253333333 0.220338983 0.386666667 59 8 0 67 X:8040256-8040469 6 fs(1)h FBtr0333307|FBtr0071119 8037806|8038789 8040978|8040978 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" X - 8040303 8040339 3'utr fs(1)h FlyBase G49359.2 TGTCCGCACATGTTTCCAAAGCTTATTATTTTTAATA 10 8040327 0.670952118 3 8 100 0.823529412 1.146128036 0 0.5 0.705882353 10 3 0 14 X:8040303-8040339 6 11 5264 FBgn0004656 6894.06 89.92333333 138.4833333 0.001595576 0.122326426 0.079431941 3 3 3 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA X 8040362 8040367 - X_8040362_8040367_- 0.983805902 0.751687801 0.867746852 0.164132283 fs(1)h FBtr0071119|FBtr0333307 8038789|8037806 8040978|8040978 X - 8040256 8040469 3'utr fs(1)h FlyBase G65547.1 AAAAAAAATGGCAAATTTCCTTCGGTTAGCAAATGATTCTTCGCAATTTTTTTAAAAATCACTTACCATCTCGCTTATTATTTTGTATTAAAATTACGATTATGATGATAATGGATCGTGGCGACAAAGATGTCCGCACATGTTTCCAAAGCTTATTATTTTTAATATTATTGATTGCCTAGGCAAGTTTAGTTCGTAGGTATACACTTAATTG 59 8040366 0.854125527 29 55 523 0.893333333 1.826074803 0.253333333 0.220338983 0.386666667 59 8 0 67 X:8040256-8040469 6 fs(1)h FBtr0333307|FBtr0071119 8037806|8038789 8040978|8040978 TGATGA 6mer3-8 dme-miR-2a-2-5p X - 8040342 8040369 3'utr fs(1)h FlyBase G49360.1 TATGATGATAATGGATCGTGGCGACAAA 8 8040360 0.600155971 4 8 37 1 0.954242509 0.222222222 0.125 0.222222222 8 0 0 9 X:8040342-8040369 6 11.5 5265 FBgn0004656 6894.06 89.92333333 138.4833333 0.001668103 0.127886718 0.083042484 -1 -7 -4 0.1 dme-miR-2a-2-5p 7mer-A1 GATGAGA X 8046340 8046346 - X_8046340_8046346_- 0.782791821 0.782801153 0.782796487 6.65E-06 fs(1)h FBtr0333309|FBtr0333308|FBtr0071118|FBtr0071120|FBtr0071121|FBtr0071122 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 X - 8046284 8046370 3'utr fs(1)h FlyBase G65562.1 TACAAAAAAAAAATGCATAGAAGAGATGAGAATGATTGATGATATGACGAGATGATAATGCAATGGAAATAAAGAAAATTTAAAAAA 104 8046344 0.96699543 11 102 514 0.967479675 2.075546961 0.268292683 0.163461538 0.292682927 104 4 0 119 X:8046284-8046370 7 fs(1)h FBtr0071121|FBtr0071122|FBtr0071120|FBtr0071118|FBtr0333309|FBtr0333308 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 GATGAGA 7mer-A1 dme-miR-2a-2-5p X - 8046301 8046357 3'utr fs(1)h FlyBase G49370.1 TGCATAGAAGAGATGAGAATGATTGATGATATGACGAGATGATAATGCAATGGAAAT 53 8046344 0.944576293 6 45 242 0.897727273 1.420505837 0.170454545 0.433962264 0.659090909 53 7 2 79 X:8046301-8046357 7 60 5266 FBgn0004656 6894.06 89.92333333 138.4833333 0.008703144 0.667235052 0.433265134 -2 -2 -2 0.1 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 8047748 8047754 - X_8047748_8047754_- 0.661615487 0.661615472 0.661615479 0 fs(1)h FBtr0333309|FBtr0333308|FBtr0071118|FBtr0071120|FBtr0071121|FBtr0071122 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 X - 8047694 8047777 3'utr fs(1)h FlyBase G65563.1 TCTGTGCCAATTTCACATGTTTTTCTAGTCCTGTTTCTTGATAATTCAAATGTGTTAATCCAAGCTCCATTGTGACGATCCCTA 40 8047755 0.902335445 6 39 459 1 1.681241237 0.0625 0.125 0.270833333 40 0 0 48 X:8047694-8047777 7 fs(1)h FBtr0071121|FBtr0071122|FBtr0071120|FBtr0071118|FBtr0333309|FBtr0333308 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X - 8047736 8047769 3'utr fs(1)h FlyBase G49371.1 AATTTCACATGTTTTTCTAGTCCTGTTTCTTGAT 31 8047755 0.691819958 6 31 369 1 1.681241237 0.041666667 0.419354839 0.625 31 0 0 48 X:8047736-8047769 7 33 5267 FBgn0004656 6894.06 89.92333333 138.4833333 0.004786729 0.366979279 0.238295824 1 1 1 0.1 dme-miR-282-5p 6mer3-8 AGAGGC X 8048006 8048011 - X_8048006_8048011_- 0.964054572 0.899680019 0.931867295 0.045519716 fs(1)h FBtr0333309|FBtr0333308|FBtr0071118|FBtr0071120|FBtr0071121|FBtr0071122 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 X - 8047965 8048028 3'utr fs(1)h FlyBase G65564.1 ATGAGTATATATATCTCAGAGGCAGCTTACTAGCAATCTTCATCGATCATCATTATATCCATTC 37 8048000 0.978616371 5 33 229 0.871794872 1.054357662 0.025641026 0.054054054 0.102564103 37 3 2 34 X:8047965-8048028 6 fs(1)h FBtr0071121|FBtr0071122|FBtr0071120|FBtr0071118|FBtr0333309|FBtr0333308 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 AGAGGC 6mer3-8 dme-miR-282-5p X - 8047953 8048028 3'utr fs(1)h FlyBase G49372.1 ATGAGTATATATATCTCAGAGGCAGCTTACTAGCAATCTTCATCGATCATCATTATATCCATTCACCACTCCCCCA 30 8048000 0.975591747 7 27 176 0.913043478 1.62324929 0 0.433333333 0.630434783 30 4 0 42 X:8047953-8048028 6 32 5268 FBgn0004656 6894.06 89.92333333 138.4833333 0.004641677 0.355858694 0.231074738 -11 -11 -11 0.1 dme-miR-980-3p 6mer3-8 GGCAGC X 8048310 8048315 - X_8048310_8048315_- 0.99849037 0.999942258 0.999216314 0.001026648 fs(1)h FBtr0333309|FBtr0333308|FBtr0071118|FBtr0071120|FBtr0071121|FBtr0071122 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 X - 8048297 8048341 3'utr fs(1)h FlyBase G65565.1 AAATCGTGAAGCAATTGTGTATTGGGGGCAGCCAATTTGAAAAAG 13 8048327 0.845826529 5 12 89 1 1.113943352 0.461538462 0 0 13 0 0 13 X:8048297-8048341 6 fs(1)h FBtr0071121|FBtr0071122|FBtr0071120|FBtr0071118|FBtr0333309|FBtr0333308 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 GGCAGC 6mer3-8 dme-miR-980-3p X - 8048308 8048337 3'utr fs(1)h FlyBase G49373.1 CGTGAAGCAATTGTGTATTGGGGGCAGCCA 6 8048325 0.95011159 4 5 36 0.875 0.84509804 0.25 0.333333333 0.5 6 1 0 7 X:8048308-8048337 6 9.5 5269 FBgn0004656 6894.06 89.92333333 138.4833333 0.001377998 0.10564555 0.068600313 12 10 11 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA X 8049214 8049219 - X_8049214_8049219_- 0.999992805 0.998548568 0.999270686 0.001021204 fs(1)h FBtr0333309|FBtr0333308|FBtr0071118|FBtr0071120|FBtr0071121|FBtr0071122 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 X - 8049208 8049247 3'utr fs(1)h FlyBase G65569.1 AAATTGAAACTTCCATTTGCCAATCGTCTGATGACTGATA 6 8049231 0.964691336 4 4 49 0.625 0.698970004 0 0.333333333 0.5 6 3 0 5 X:8049208-8049247 6 fs(1)h FBtr0071121|FBtr0071122|FBtr0071120|FBtr0071118|FBtr0333309|FBtr0333308 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 TGATGA 6mer3-8 dme-miR-2a-2-5p X - 8049206 8049233 3'utr fs(1)h FlyBase G49376.1 ATTTGCCAATCGTCTGATGACTGATATG 6 8049231 0.738476468 5 5 39 0.8 0.903089987 0 0.5 0.7 6 2 0 8 X:8049206-8049233 6 6 5270 FBgn0004656 6894.06 89.92333333 138.4833333 0.000870314 0.066723505 0.043326513 12 12 12 0.1 dme-miR-34-5p 7mer-A1 ACTGCCA X 8069173 8069179 + X_8069173_8069179_+ 0.804652811 0.815939789 0.8102963 0.007981114 mys FBtr0340135|FBtr0340137|FBtr0071105|FBtr0340136 8068934|8068934|8068934|8068934 8070237|8070237|8070237|8070237 X + 8069129 8069211 3'utr mys FlyBase G59706.1 CATCGACGAAGCTGCTTTGCCCGGGTGCAAAACCACTGAAGTCAACTGCCATTGAAACGCGTTCTAAACTAAGTCAGCCCTAT 68 8069180 0.844709416 8 68 285 1 1.986771734 0.195876289 0.294117647 0.505154639 68 0 0 97 X:8069129-8069211 7 mys FBtr0071105|FBtr0340136|FBtr0340135|FBtr0340137 8068934|8068934|8068934|8068934 8070237|8070237|8070237|8070237 ACTGCCA 7mer-A1 dme-miR-34-5p X + 8069133 8069209 3'utr mys FlyBase G45139.1 GACGAAGCTGCTTTGCCCGGGTGCAAAACCACTGAAGTCAACTGCCATTGAAACGCGTTCTAAACTAAGTCAGCCCT 63 8069180 0.949332646 11 62 269 0.990196078 2.004321374 0.264705882 0.428571429 0.647058824 63 1 0 101 X:8069133-8069209 7 60 5271 FBgn0004657 3546.84 102.2566667 157.0266667 0.016916466 0.58675881 0.382100705 -7 -7 -7 0.1 dme-miR-33-5p 6mer3-8 CAATGC X 8069721 8069726 + X_8069721_8069726_+ 0.999999994 0.999944819 0.999972406 3.90E-05 mys FBtr0340135|FBtr0340137|FBtr0071105|FBtr0340136 8068934|8068934|8068934|8068934 8070237|8070237|8070237|8070237 X + 8069684 8069743 3'utr mys FlyBase G59710.1 AACTAATCTGCTACCCTCCCAAAACGGTCGTCCTTCGCAATGCCAAACCCCCCAACGTCT 45 8069717 0.939313451 6 45 200 1 1.69019608 0.306122449 0.088888889 0.163265306 45 0 0 49 X:8069684-8069743 6 mys FBtr0071105|FBtr0340136|FBtr0340135|FBtr0340137 8068934|8068934|8068934|8068934 8070237|8070237|8070237|8070237 CAATGC 6mer3-8 dme-miR-33-5p X + 8069682 8069752 3'utr mys FlyBase G45141.1 TTAACTAATCTGCTACCCTCCCAAAACGGTCGTCCTTCGCAATGCCAAACCCCCCAACGTCTTAATGTTTT 24 8069717 0.748701495 8 21 125 0.810810811 1.477121255 0.351351351 0.416666667 0.621621622 24 7 0 30 X:8069682-8069752 6 17 5272 FBgn0004657 3546.84 102.2566667 157.0266667 0.004792999 0.166248329 0.108261866 4 4 4 0.1 dme-miR-317-3p 6mer3-8 TGTGTT X 8069949 8069954 + X_8069949_8069954_+ 1 0.969814797 0.984907399 0.02134416 mys FBtr0340135|FBtr0340137|FBtr0071105|FBtr0340136 8068934|8068934|8068934|8068934 8070237|8070237|8070237|8070237 X + 8069913 8069961 3'utr mys FlyBase G59711.1 GAAAGCGTGGCAACAGGGGAAATTGTCCCTTGTGTGTGTGTTTTATTTA 10 8069935 0.989252709 6 9 83 1 1.041392685 0.181818182 0.1 0.181818182 10 0 0 11 X:8069913-8069961 6 mys FBtr0071105|FBtr0340136|FBtr0340135|FBtr0340137 8068934|8068934|8068934|8068934 8070237|8070237|8070237|8070237 TGTGTT 6mer3-8 dme-miR-317-3p X + 8069900 8069983 3'utr mys FlyBase G45142.1 ATTTATGGAAAACGAAAGCGTGGCAACAGGGGAAATTGTCCCTTGTGTGTGTGTTTTATTTAACTGAATTTCGATCATTAATAG 8 8069935 0.985235672 7 8 61 1 1.176091259 0.6 0.625 0.8 8 0 0 15 X:8069900-8069983 6 5.5 5273 FBgn0004657 3546.84 102.2566667 157.0266667 0.001550676 0.053786224 0.035025898 14 14 14 0.1 dme-miR-263a-5p 7mer-m1 TGCCATT X 8070017 8070023 + X_8070017_8070023_+ 0.765586663 0.76558408 0.765585371 1.84E-06 mys FBtr0340135|FBtr0340137|FBtr0071105|FBtr0340136 8068934|8068934|8068934|8068934 8070237|8070237|8070237|8070237 X + 8070007 8070052 3'utr mys FlyBase G59712.1 ATATATTTTTTGCCATTTGTACTGATTACTGATTAACATTTAAAGT 67 8070023 0.642860456 12 64 695 0.949367089 1.574031268 0.050632911 0.149253731 0.278481013 67 3 1 75 X:8070007-8070052 7 mys FBtr0071105|FBtr0340136|FBtr0340135|FBtr0340137 8068934|8068934|8068934|8068934 8070237|8070237|8070237|8070237 TGCCATT 7mer-m1 dme-miR-263a-5p X + 8070003 8070047 3'utr mys FlyBase G45143.1 AAATATATATTTTTTGCCATTTGTACTGATTACTGATTAACATTT 41 8070023 0.729219999 10 36 433 0.859375 1.439332694 0.046875 0.390243902 0.609375 41 8 1 55 X:8070003-8070047 7 48 5274 FBgn0004657 3546.84 102.2566667 157.0266667 0.013533173 0.469407048 0.305680564 -6 -6 -6 0.1 dme-miR-252-5p 6mer3-8 GTACTT X 8070346 8070351 - X_8070346_8070351_- 0.999999918 0.999999976 0.999999947 7.07E-08 Upf2 FBtr0071117 8070242 8071284 X - 8070325 8070365 3'utr Upf2 FlyBase G65602.1 TGCATTGATGCTAGGTACTTTATCTCATGTTGTATAAGAAA 13 8070338 0.628639137 4 12 138 0.923076923 1.079181246 0.153846154 0 0 13 1 0 12 X:8070325-8070365 6 Upf2 FBtr0071117 8070242 8071284 GTACTT 6mer3-8 dme-miR-252-5p X - 8070326 8070364 3'utr Upf2 FlyBase G49403.1 GCATTGATGCTAGGTACTTTATCTCATGTTGTATAAGAA 6 8070338 0.640406874 3 6 60 1 1.041392685 0.363636364 0.666666667 0.818181818 6 0 0 11 X:8070326-8070364 6 9.5 5275 FBgn0029992 611.4266667 14.48666667 22.18333333 0.015537432 0.655775426 0.428249437 -13 -13 -13 0.1 dme-miR-308-3p 7mer-m1 TGTGATT X 8087854 8087860 - X_8087854_8087860_- 0.408126354 0.440580466 0.42435341 0.022948514 UbcE2H FBtr0071112 8087542 8089308 X - 8087831 8087870 3'utr UbcE2H FlyBase G65623.1 TTGATGAGGATGTGATTTTTAGAAGGCGGGTTCTTAAGTG 12 8087853 0.612532161 5 10 110 0.833333333 1 0.416666667 0 0 12 2 0 10 X:8087831-8087870 7 UbcE2H FBtr0071112 8087542 8089308 TGTGATT 7mer-m1 dme-miR-308-3p X - 8087831 8087871 3'utr UbcE2H FlyBase G49414.1 TTTGATGAGGATGTGATTTTTAGAAGGCGGGTTCTTAAGTG 9 8087853 0.637204959 4 9 80 1 1.146128036 0.285714286 0.444444444 0.642857143 9 0 0 14 X:8087831-8087871 7 10.5 5276 FBgn0029996 2080.593333 98.34666667 150.9166667 0.005046637 0.106765184 0.069574821 -7 -7 -7 0.1 dme-bantam-3p 6mer3-8 TGATCT X 8088674 8088679 - X_8088674_8088679_- 0.999996391 0.992868589 0.99643249 0.005040116 UbcE2H FBtr0071113|FBtr0071114|FBtr0071112 8088007|8088007|8087542 8089308|8089308|8089308 X - 8088618 8088724 5'utr UbcE2H FlyBase G65627.1 AAGTGCACATGCAATGCGAAATTTGACGAGAAATTGCTTTGGCCTTGATCTGGCATTAAACAGACTTCGATGCTCGTCGTTCTTTAGAGTTTAACAAGTTGATAGAA 15 8088679 0.98405202 10 15 117 1 1.176091259 0.266666667 0 0 15 0 0 15 X:8088618-8088724 6 UbcE2H FBtr0071114|FBtr0071112|FBtr0071113 8088007|8087542|8088007 8089308|8089308|8089308 TGATCT 6mer3-8 dme-bantam-3p X - 8088667 8088701 5'utr UbcE2H FlyBase G49418.1 TGACGAGAAATTGCTTTGGCCTTGATCTGGCATTA 6 8088686 0.886913661 2 6 47 1 1 0.2 0.333333333 0.6 6 0 0 10 X:8088667-8088701 6 7.5 5277 FBgn0029996 2080.593333 98.34666667 150.9166667 0.003604741 0.076260846 0.0496963 0 7 3.5 0.1 dme-miR-184-5p 6mer3-8 TGATAA X 8088923 8088928 - X_8088923_8088928_- 0.917619426 0.917994766 0.917807096 0.000265448 UbcE2H FBtr0071113|FBtr0071114|FBtr0071112 8088007|8088007|8087542 8089308|8089308|8089308 X - 8088898 8088989 5'utr UbcE2H FlyBase G65631.1 ACACTAATGTAAGCAGAAAGAAAAACAAGATTTAAAAACTCTTAGTTTAGCCATCAGTAGCTGATAACAAAACGGATTGGAGCAACGATCGC 18 8088913 0.96303006 12 17 82 0.958333333 1.06069784 0.125 0.222222222 0.416666667 18 0 1 23 X:8088898-8088989 6 UbcE2H FBtr0071114|FBtr0071112|FBtr0071113 8088007|8087542|8088007 8089308|8089308|8089308 TGATAA 6mer3-8 dme-miR-184-5p X - 8088867 8088942 5'utr UbcE2H FlyBase G49420.1 TAGCCATCAGTAGCTGATAACAAAACGGATTGGAGCAACGATCGCAACAGATCATAGCAGATATATAGACCACAGT 15 8088913 0.948270407 7 11 51 0.95 1.278753601 0 0.333333333 0.5 15 1 0 19 X:8088867-8088942 6 7.5 5278 FBgn0029996 2080.593333 98.34666667 150.9166667 0.003604741 0.076260846 0.0496963 -15 -15 -15 0.1 dme-miR-986-5p 6mer3-8 ATTCGA X 8089060 8089065 - X_8089060_8089065_- 0.99999968 0.999999874 0.999999777 1.41E-07 UbcE2H FBtr0071113|FBtr0071114|FBtr0071112 8088007|8088007|8087542 8089308|8089308|8089308 X - 8089034 8089105 5'utr UbcE2H FlyBase G65632.1 ATAATTGATAAATGATAATTGGATTTTAAGATAGAAAGTGATTCGATGATGGCGTGTGATGATCAGCGCACA 28 8089063 0.795574029 9 27 191 0.96875 1.491361694 0.25 0.142857143 0.25 28 1 0 31 X:8089034-8089105 6 UbcE2H FBtr0071114|FBtr0071112|FBtr0071113 8088007|8087542|8088007 8089308|8089308|8089308 ATTCGA 6mer3-8 dme-miR-986-5p X - 8089036 8089105 5'utr UbcE2H FlyBase G49421.1 ATAATTGATAAATGATAATTGGATTTTAAGATAGAAAGTGATTCGATGATGGCGTGTGATGATCAGCGCA 26 8089063 0.952230889 8 26 174 1 1.612783857 0.170731707 0.384615385 0.609756098 26 0 0 41 X:8089036-8089105 6 24 5279 FBgn0029996 2080.593333 98.34666667 150.9166667 0.011535171 0.244034707 0.159028161 -2 -2 -2 0.1 dme-miR-308-3p 7mer-m1 TGTGATT X 8102652 8102658 - X_8102652_8102658_- 0.435317636 0.443060526 0.439189081 0.005475057 Gclc FBtr0071107|FBtr0340138|FBtr0071108|FBtr0340139 8102580|8102179|8102580|8102580 8103531|8103531|8103531|8103531 X - 8102605 8102727 3'utr Gclc FlyBase G65648.1 TTAAACTAGATATGATAAGTACACATATAACGAAAAAAACAACACTGTGCTATTATAATTTATTGTGTATGTGATTGTTTCCCCATTATGATACGATTATGATTTATTGTGACCACAAGCAAG 15 8102652 0.982445059 7 14 113 1 1.204119983 0.0625 0.066666667 0.125 15 0 0 16 X:8102605-8102727 7 Gclc FBtr0071107|FBtr0340138|FBtr0071108|FBtr0340139 8102580|8102179|8102580|8102580 8103531|8103531|8103531|8103531 TGTGATT 7mer-m1 dme-miR-308-3p X - 8102642 8102696 3'utr Gclc FlyBase G49432.1 GAAAAAAACAACACTGTGCTATTATAATTTATTGTGTATGTGATTGTTTCCCCAT 10 8102651 0.983932366 5 10 82 1 1.079181246 0.333333333 0.2 0.333333333 10 0 0 12 X:8102642-8102696 7 6 5280 FBgn0040319 793.1366667 24.97666667 38.58666667 0.007564901 0.240224209 0.155494126 -6 -7 -6.5 0.1 dme-miR-190-5p 6mer3-8 ACATAT X 8102923 8102928 - X_8102923_8102928_- 0.994216782 0.989941535 0.992079159 0.003023094 Gclc FBtr0071107|FBtr0340138|FBtr0071108|FBtr0340139 8102580|8102179|8102580|8102580 8103531|8103531|8103531|8103531 X - 8102880 8102972 3'utr Gclc FlyBase G65650.1 ATCTCAACTAAGTGCCGTTCCACGAGACCTACAAAAATATGAATACATATAGTTCAAAACGAGGCAAGGTTAAAAGTGTATTTCTGTTTGTTT 25 8102923 0.960622226 7 25 126 1 1.447158031 0.178571429 0.12 0.214285714 25 0 0 28 X:8102880-8102972 6 Gclc FBtr0071107|FBtr0340138|FBtr0071108|FBtr0340139 8102580|8102179|8102580|8102580 8103531|8103531|8103531|8103531 ACATAT 6mer3-8 dme-miR-190-5p X - 8102895 8102934 3'utr Gclc FlyBase G49433.1 ATGAATACATATAGTTCAAAACGAGGCAAGGTTAAAAGTG 13 8102923 0.768485222 3 13 54 1 1.361727836 0.217391304 0.538461538 0.739130435 13 0 0 23 X:8102895-8102934 6 13 5281 FBgn0040319 793.1366667 24.97666667 38.58666667 0.016390618 0.520485787 0.336903939 -5 -5 -5 0.1 dme-miR-995-5p 7mer-m1 ATTCGGG X 8103466 8103472 - X_8103466_8103472_- 0.82529048 0.82521964 0.82525506 5.01E-05 Gclc FBtr0071107|FBtr0340138|FBtr0071108|FBtr0340139 8102580|8102179|8102580|8102580 8103531|8103531|8103531|8103531 X - 8103449 8103534 stop_codon Gclc FlyBase G65652.1 TGATCGAGGAGCGCGCTGCGGACGCGTTCAGCGCAGCTGGCCGCCGGTGGCCGGCGCATGTGATTCGGGTTTTGTGGGTCCGTTCG 37 8103470 0.973353604 9 37 223 1 1.579783597 0.605263158 0.027027027 0.052631579 37 0 0 38 X:8103449-8103534 7 Gclc FBtr0071107|FBtr0340138|FBtr0071108|FBtr0340139 8102580|8102179|8102580|8102580 8103531|8103531|8103531|8103531 ATTCGGG 7mer-m1 dme-miR-995-5p X - 8103452 8103515 3'utr Gclc FlyBase G49434.1 GGACGCGTTCAGCGCAGCTGGCCGCCGGTGGCCGGCGCATGTGATTCGGGTTTTGTGGGTCCGT 20 8103470 0.978080341 5 20 137 1 1.431363764 0.518518519 0.3 0.481481481 20 0 0 27 X:8103452-8103515 7 25 5282 FBgn0040319 793.1366667 24.97666667 38.58666667 0.031520419 1.000934205 0.647892191 -2 -2 -2 0.1 dme-miR-277-3p 7mer-m8 TGCATTT X 8143958 8143964 - X_8143958_8143964_- 0.620179102 0.62019333 0.620186216 1.00E-05 CG2263 FBtr0071190 8143902 8143998 X - 8143932 8143982 3'utr CG2263 FlyBase G65687.1 TAGGACCTGCGATCAAATTGCATTTTTTTTCACACATGAATGTTCCAAAAC 15 8143965 0.847275386 3 14 140 0.933333333 1.146128036 0.533333333 0 0 15 1 0 14 X:8143932-8143982 7 CG2263 FBtr0071190 8143902 8143998 TGCATTT 7mer-m8 dme-miR-277-3p X - 8143932 8143981 3'utr CG2263 FlyBase G49455.1 AGGACCTGCGATCAAATTGCATTTTTTTTCACACATGAATGTTCCAAAAC 5 8143965 0.984478007 3 5 39 1 0.84509804 0 0.4 0.571428571 5 0 0 7 X:8143932-8143981 7 8.5 5283 FBgn0030007 507.0733333 36.52333333 55.98333333 0.016762861 0.232727936 0.151830902 1 1 1 0.1 dme-miR-317-5p 7mer-A1 TATCCCA X 8154769 8154775 - X_8154769_8154775_- 0.657084392 0.823280627 0.74018251 0.11751846 Traf6 FBtr0071188 8154597 8155833 X - 8154768 8154810 3'utr Traf6 FlyBase G65696.1 AAAAAAAAAAACAACAAAGGCTGTATGTATTATTTTATCCCAA 13 8154785 0.940923541 4 13 52 1 1.361727836 0 0.538461538 0.739130435 13 0 0 23 X:8154768-8154810 7 Traf6 FBtr0071188 8154597 8155833 TATCCCA 7mer-A1 dme-miR-317-5p X - 8154771 8154807 3'utr Traf6 FlyBase G49465.1 AAAAAAAACAACAAAGGCTGTATGTATTATTTTATCC 10 8154784 0.951170018 4 10 49 1 1.041392685 0 0.1 0.181818182 10 0 0 11 X:8154771-8154807 4 1.5 5284 FBgn0265464 124.9866667 5.45 8.333333333 0.01200128 0.275229358 0.18 10 9 9.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 8154902 8154907 - X_8154902_8154907_- 1 1 1 0 Traf6 FBtr0071188 8154597 8155833 X - 8154889 8154953 3'utr Traf6 FlyBase G65698.1 AAAACTAGTAATGAGTGAACCGACCAGCGCATAGAATATAAAATATGTACCTTTTTTGAAAACAA 23 8154900 0.849004415 8 22 190 0.961538462 1.096910013 0.038461538 0.086956522 0.192307692 23 0 1 25 X:8154889-8154953 6 Traf6 FBtr0071188 8154597 8155833 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X - 8154893 8154952 3'utr Traf6 FlyBase G49467.1 AAACTAGTAATGAGTGAACCGACCAGCGCATAGAATATAAAATATGTACCTTTTTTGAAA 25 8154908 0.89132802 5 24 199 0.96969697 1.505149978 0.212121212 0.2 0.393939394 25 1 0 32 X:8154893-8154952 6 18.5 5285 FBgn0265464 124.9866667 5.45 8.333333333 0.148015788 3.394495413 2.22 -7 1 -3 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA X 8155326 8155331 - X_8155326_8155331_- 0.892226822 0.802110533 0.847168678 0.063721847 Traf6 FBtr0071188 8154597 8155833 X - 8155267 8155348 3'utr Traf6 FlyBase G65700.1 ATCACATTAAGCAATCTTGATGATATTCAAATACTAATCGATATTAGCCTAGTATCCTAGAACTATCTCTTATTCTCTATTT 19 8155332 0.735306946 9 18 135 0.96 1.380211242 0 0.263157895 0.44 19 1 0 24 X:8155267-8155348 6 Traf6 FBtr0071188 8154597 8155833 TGATGA 6mer3-8 dme-miR-2a-2-5p X - 8155264 8155350 3'utr Traf6 FlyBase G49469.1 GCATCACATTAAGCAATCTTGATGATATTCAAATACTAATCGATATTAGCCTAGTATCCTAGAACTATCTCTTATTCTCTATTTGTA 13 8155330 0.973907883 7 13 106 1 1.230448921 0.176470588 0.307692308 0.470588235 13 0 0 17 X:8155264-8155350 6 9.5 5286 FBgn0265464 124.9866667 5.45 8.333333333 0.076008108 1.743119266 1.14 1 -1 0 0.1 dme-miR-1003-3p 7mer-A1 TGTGAGA X 8158724 8158730 + X_8158724_8158730_+ 0.82330625 0.823332024 0.823319137 1.82E-05 GIIIspla2 FBtr0303457|FBtr0345987 8158376|8158376 8159017|8159348 X + 8158708 8158750 3'utr GIIIspla2 FlyBase G59745.1 ACTTAGATGAACAGATTGTGAGAGGAGGAGGAGGAGAGACAGC 22 8158723 0.925315658 3 19 65 0.75862069 1.041392685 0.551724138 0.181818182 0.379310345 22 6 1 22 X:8158708-8158750 7 GIIIspla2 FBtr0345987|FBtr0303457 8158376|8158376 8159348|8159017 TGTGAGA 7mer-A1 dme-miR-1003-3p X + 8158690 8158750 3'utr GIIIspla2 FlyBase G45170.1 AACACCATCATCATCCGTACTTAGATGAACAGATTGTGAGAGGAGGAGGAGGAGAGACAGC 16 8158723 0.903345565 4 14 45 0.935483871 1.462397998 0.451612903 0.6875 0.838709677 16 2 0 29 X:8158690-8158750 7 18 5287 FBgn0030013 187 19.04 29.33333333 0.096256684 0.945378151 0.613636364 1 1 1 0.1 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT X 8158871 8158876 + X_8158871_8158876_+ 0.999999187 0.997354571 0.998676879 0.001870015 GIIIspla2 FBtr0303457|FBtr0345987 8158376|8158376 8159017|8159348 X + 8158761 8158912 3'utr GIIIspla2 FlyBase G59746.1 ACGTCTATGTATTAGGCTAAATTACCAACATATTTATATGACTGTCAAGTGCTATTATAATGCGTAGTAGTCGATACGATGTACTAACACACCTAGTTGTAGTCACTCAATCTAGTTTAGGCCAACGAATCGATAACAGGCTGCCAGAAAAC 41 8158894 0.840220545 15 37 242 0.895833333 1.633468456 0.104166667 0.146341463 0.270833333 41 5 0 43 X:8158761-8158912 6 GIIIspla2 FBtr0345987|FBtr0303457 8158376|8158376 8159348|8159017 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" X + 8158821 8158910 3'utr GIIIspla2 FlyBase G45172.1 TGCGTAGTAGTCGATACGATGTACTAACACACCTAGTTGTAGTCACTCAATCTAGTTTAGGCCAACGAATCGATAACAGGCTGCCAGAAA 13 8158878 0.964911276 7 10 53 0.944444444 1.230448921 0 0.307692308 0.5 13 1 0 17 X:8158821-8158910 6 5.5 5288 FBgn0030013 187 19.04 29.33333333 0.029411765 0.288865546 0.1875 -23 -7 -15 0.1 dme-miR-276a-3p 7mer-A1 GTTCCTA X 8171293 8171299 - X_8171293_8171299_- 0.572780139 0.735465019 0.654122579 0.115035596 slpr FBtr0303842|FBtr0303843|FBtr0303844|FBtr0071184 8170677|8170227|8170677|8170677 8171581|8171581|8171581|8171581 X - 8171285 8171315 3'utr slpr FlyBase G65706.1 TCATAATAACCGAATTGTTCCTAACGAATGC 12 8171300 0.694288973 3 11 65 0.933333333 1.146128036 0 0.166666667 0.333333333 12 1 0 14 X:8171285-8171315 7 slpr FBtr0303842|FBtr0303843|FBtr0303844|FBtr0071184 8170677|8170227|8170677|8170677 8171581|8171581|8171581|8171581 GTTCCTA 7mer-A1 dme-miR-276a-3p X - 8171274 8171313 3'utr slpr FlyBase G49473.1 ATAATAACCGAATTGTTCCTAACGAATGCAATATGTTGTG 10 8171300 0.963992488 4 10 53 1 1.204119983 0 0.4 0.625 10 0 0 16 X:8171274-8171313 7 11 5289 FBgn0030018 811.23 18.14 27.89 0.013559656 0.606394708 0.394406597 1 1 1 0.1 dme-miR-980-3p 7mer-m8 GGCAGCT X 8239111 8239117 + X_8239111_8239117_+ 0.658994917 0.658994914 0.658994915 0 sdt FBtr0100376|FBtr0089975|FBtr0089978|FBtr0340141|FBtr0333720|FBtr0333721|FBtr0308218|FBtr0308219|FBtr0340142|FBtr0308217|FBtr0111034|FBtr0100375|FBtr0308220|FBtr0089974 8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445 8239427|8239427|8240474|8239427|8240474|8239427|8239427|8239427|8240474|8239427|8239427|8239427|8239427|8240474 X + 8239073 8239130 3'utr sdt FlyBase G59752.1 AGCGACTCCGAATGTTAACAGAGCCAGAACAATCCGTAGGCAGCTGTGCGAGGGGAGA 11 8239109 0.899253583 2 11 33 1 1.041392685 0.636363636 0 0 11 0 0 11 X:8239073-8239130 7 sdt FBtr0308220|FBtr0089974|FBtr0111034|FBtr0100375|FBtr0308219|FBtr0089975|FBtr0308217|FBtr0333720|FBtr0100376|FBtr0089978|FBtr0308218|FBtr0340141|FBtr0333721|FBtr0340142 8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445 8239427|8240474|8239427|8239427|8239427|8239427|8239427|8240474|8239427|8240474|8239427|8239427|8239427|8240474 GGCAGCT 7mer-m8 dme-miR-980-3p X + 8239092 8239144 3'utr sdt FlyBase G45177.1 AGAGCCAGAACAATCCGTAGGCAGCTGTGCGAGGGGAGATCGATCCGTCGGAT 7 8239109 0.923354171 3 7 24 1 1.113943352 0.615384615 0.714285714 0.846153846 7 0 0 13 X:8239092-8239144 7 8 5290 FBgn0261873 288.2033333 5.556666667 8.47 0.02775818 1.439712058 0.944510035 2 2 2 0.1 dme-miR-307a-3p 6mer3-8 GGTTGT X 8247766 8247771 + X_8247766_8247771_+ 0.999547648 0.999621788 0.999584718 5.25E-05 Trxr-1 FBtr0071169|FBtr0071168|FBtr0071167 8247693|8247693|8247693 8248033|8248033|8248033 X + 8247716 8247834 3'utr Trxr-1 FlyBase G59769.1 CCTGGGACGTGTCGAAGCCGCTTGCTCCACCCGAAATCCCGTAGATGAATGGTTGTTGTCGCGGCCCAGCGATCGATGAGTTCAATAGTTCCGTTTCGTTTCCACAATTAACACCCAAC 17 8247765 0.980764245 7 17 120 1 1.301029996 0.4 0.117647059 0.25 17 0 0 20 X:8247716-8247834 6 Trxr-1 FBtr0071168|FBtr0071167|FBtr0071169 8247693|8247693|8247693 8248033|8248033|8248033 GGTTGT 6mer3-8 dme-miR-307a-3p X + 8247725 8247785 3'utr Trxr-1 FlyBase G45191.1 TGTCGAAGCCGCTTGCTCCACCCGAAATCCCGTAGATGAATGGTTGTTGTCGCGGCCCAGC 6 8247765 0.975074542 2 6 35 1 0.903089987 0.25 0.333333333 0.5 6 0 0 8 X:8247725-8247785 6 6.5 5291 FBgn0020653 1519.943333 86.74333333 132.1866667 0.004276475 0.074933712 0.049172887 1 1 1 0.1 dme-miR-988-3p 7mer-A1 CAAGGGA X 8247849 8247855 + X_8247849_8247855_+ 0.78118363 0.760050154 0.770616892 0.01494357 Trxr-1 FBtr0071169|FBtr0071168|FBtr0071167 8247693|8247693|8247693 8248033|8248033|8248033 X + 8247837 8247868 3'utr Trxr-1 FlyBase G59770.1 AATAGCTCTGCGCAAGGGAGGGGCACTGGGCA 7 8247844 0.562309598 2 7 9 1 0.84509804 0 0 0 7 0 0 7 X:8247837-8247868 7 Trxr-1 FBtr0071168|FBtr0071167|FBtr0071169 8247693|8247693|8247693 8248033|8248033|8248033 CAAGGGA 7mer-A1 dme-miR-988-3p X + 8247840 8247861 3'utr Trxr-1 FlyBase G45192.1 AGCTCTGCGCAAGGGAGGGGCA 5 8247843 0.636742044 2 5 5 1 1.041392685 0 0.6 0.818181818 5 0 0 11 X:8247840-8247861 7 6 5292 FBgn0020653 1519.943333 86.74333333 132.1866667 0.003947516 0.069169581 0.045390357 5 6 5.5 0.1 dme-miR-282-5p 6mer2-7 GAGGCT X 8275823 8275828 + X_8275823_8275828_+ 0.999993911 0.999940064 0.999966987 3.80E-05 CG1636 FBtr0339833|FBtr0071171 8275361|8275361 8276450|8276201 X + 8275771 8275856 3'utr CG1636 FlyBase G59775.1 AAATCAAACGTGCAGATAATCTCAAAGGCTATATACGCAAAAATCGAAAAGTGAGGCTTACAAAATTAATCTCCTAGAAGTATTTA 63 8275822 0.933545604 7 60 289 0.957746479 1.531478917 0.056338028 0.095238095 0.197183099 63 2 1 68 X:8275771-8275856 6 CG1636 FBtr0339833|FBtr0071171 8275361|8275361 8276450|8276201 GAGGCT 6mer2-7 dme-miR-282-5p X + 8275775 8275855 3'utr CG1636 FlyBase G45196.1 CAAACGTGCAGATAATCTCAAAGGCTATATACGCAAAAATCGAAAAGTGAGGCTTACAAAATTAATCTCCTAGAAGTATTT 45 8275822 0.948411095 5 45 180 1 1.819543936 0.090909091 0.422222222 0.606060606 45 0 0 66 X:8275775-8275855 6 41 5293 FBgn0030030 151.2133333 8.68 13.2 0.271140111 4.723502304 3.106060606 1 1 1 0.1 dme-miR-2b-2-5p 6mer2-7 TGAAGA X 8402963 8402968 + X_8402963_8402968_+ 0.999221521 0.99915553 0.999188525 4.67E-05 CG10555 FBtr0071174|FBtr0343353 8402563|8402563 8403942|8404516 X + 8402905 8402989 3'utr CG10555 FlyBase G59783.1 GAAGACGGACGAGTAAGCATAAGACTTAAAGTAGGCGAAAAGAACGACGAATGAGAAATGAAGACGAGATGGAAATTCAGGATTC 355 8402963 0.971952485 5 351 794 0.988179669 2.320146286 0.444444444 0.154929577 0.290780142 355 4 1 418 X:8402905-8402989 6 CG10555 FBtr0343353|FBtr0071174 8402563|8402563 8404516|8403942 TGAAGA 6mer2-7 dme-miR-2b-2-5p X + 8402910 8402986 3'utr CG10555 FlyBase G45199.1 CGGACGAGTAAGCATAAGACTTAAAGTAGGCGAAAAGAACGACGAATGAGAAATGAAGACGAGATGGAAATTCAGGA 173 8402963 0.979528508 6 171 361 0.992217899 2.105510185 0.459143969 0.358381503 0.568093385 173 1 1 255 X:8402910-8402986 6 254.5 5294 FBgn0030034 842.1066667 21.32333333 32.79333333 0.302218246 11.93528216 7.760723724 0 0 0 0.1 dme-miR-995-5p 7mer-m8 AATTCGG X 8403060 8403066 + X_8403060_8403066_+ 0.67178675 0.671794142 0.671790446 5.23E-06 CG10555 FBtr0071174|FBtr0343353 8402563|8402563 8403942|8404516 X + 8402999 8403093 3'utr CG10555 FlyBase G59784.1 AGCAGCGAATTCCTCGAATTTCGAACTGAACTGTACGAAAGTTGCAGGCAGTTTTTTTTTAAATTCGGTGATAAATAGCAGAAGCAAGTAGCAGG 34 8403062 0.819490487 10 32 242 0.975 1.591064607 0.4 0.117647059 0.25 34 1 0 39 X:8402999-8403093 7 CG10555 FBtr0343353|FBtr0071174 8402563|8402563 8404516|8403942 AATTCGG 7mer-m8 dme-miR-995-5p X + 8403053 8403083 3'utr CG10555 FlyBase G45200.1 TTTTTTAAATTCGGTGATAAATAGCAGAAGC 11 8403062 0.767484927 2 10 71 0.933333333 1.146128036 0.533333333 0.363636364 0.533333333 11 1 0 14 X:8403053-8403083 7 17 5295 FBgn0030034 842.1066667 21.32333333 32.79333333 0.020187466 0.79724871 0.518398048 -2 -2 -2 0.1 dme-miR-1008-3p 6mer2-7 GCTGTG X 8408015 8408020 - X_8408015_8408020_- 0.986189604 0.733184847 0.859687225 0.17890141 lawc FBtr0071248|FBtr0302081|FBtr0307287|FBtr0307286 8408006|8408006|8408006|8408006 8409752|8409752|8409752|8409752 X - 8408008 8408041 3'utr lawc FlyBase G65738.1 TATACATAATAATAAATGATCGCTGTGTTTATGC 13 8408022 0.808062838 4 12 104 0.944444444 1.230448921 0 0.307692308 0.5 13 1 0 17 X:8408008-8408041 6 lawc FBtr0071248|FBtr0302081|FBtr0307287|FBtr0307286 8408006|8408006|8408006|8408006 8409752|8409752|8409752|8409752 GCTGTG 6mer2-7 dme-miR-1008-3p X - 8408008 8408041 3'utr lawc FlyBase G49498.1 TATACATAATAATAAATGATCGCTGTGTTTATGC 15 8408014 0.622255502 6 13 120 0.869565217 1.301029996 0 0.4 0.608695652 15 3 0 20 X:8408008-8408041 6 14 5296 FBgn0262976 211.98 11.61333333 17.8 0.066043966 1.205510907 0.786516854 2 -6 -2 0.1 dme-miR-14-3p 7mer-m8 AAGACTG X 8408092 8408098 - X_8408092_8408098_- 0.600731979 0.430998075 0.515865027 0.120019992 lawc FBtr0071248|FBtr0302081|FBtr0307287|FBtr0307286 8408006|8408006|8408006|8408006 8409752|8409752|8409752|8409752 X - 8408069 8408308 3'utr lawc FlyBase G65739.1 AATAATTTCAAGGAGAAGATGTTTTTGTGGTCAAAAACGTGCAGATGACTTCTAAGAAGTTGGAAAATCATGTATTTACTCGGAAAGAAGCCAGAACTGAAGTAGCATACTTATTAGTATTATCAAATGATGAGTTTTTTCATCATAGTTTTAGTTCTATATTTATAGAAAAAAAAAACTTTCCTTGTTACTTTTAGTTTTTTCATTTGAAAGACTGCCGTTGACTTTTTCATTTTATTC 59 8408103 0.982688276 23 56 436 0.938461538 1.785329835 0.092307692 0.101694915 0.184615385 59 4 0 61 X:8408069-8408308 7 lawc FBtr0071248|FBtr0302081|FBtr0307287|FBtr0307286 8408006|8408006|8408006|8408006 8409752|8409752|8409752|8409752 AAGACTG 7mer-m8 dme-miR-14-3p X - 8408078 8408146 3'utr lawc FlyBase G49499.1 TTATAGAAAAAAAAAACTTTCCTTGTTACTTTTAGTTTTTTCATTTGAAAGACTGCCGTTGACTTTTTC 30 8408103 0.728668305 14 29 265 0.979591837 1.681241237 0.040816327 0.466666667 0.673469388 30 1 0 48 X:8408078-8408146 7 27 5297 FBgn0262976 211.98 11.61333333 17.8 0.127370507 2.324913892 1.516853933 5 5 5 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA X 8408196 8408201 - X_8408196_8408201_- 0.972117448 0.91016367 0.941140559 0.043807881 lawc FBtr0071248|FBtr0071248|FBtr0302081|FBtr0302081|FBtr0307287|FBtr0307287|FBtr0307286|FBtr0307286 8408006|8408006|8408006|8408006|8408006|8408006|8408006|8408006 8409752|8409752|8409752|8409752|8409752|8409752|8409752|8409752 X - 8408069 8408308 3'utr lawc FlyBase G65739.1 AATAATTTCAAGGAGAAGATGTTTTTGTGGTCAAAAACGTGCAGATGACTTCTAAGAAGTTGGAAAATCATGTATTTACTCGGAAAGAAGCCAGAACTGAAGTAGCATACTTATTAGTATTATCAAATGATGAGTTTTTTCATCATAGTTTTAGTTCTATATTTATAGAAAAAAAAAACTTTCCTTGTTACTTTTAGTTTTTTCATTTGAAAGACTGCCGTTGACTTTTTCATTTTATTC 59 8408206 0.982688276 23 56 436 0.938461538 1.785329835 0.092307692 0.101694915 0.184615385 59 4 0 61 X:8408069-8408308 6 lawc FBtr0071248|FBtr0071248|FBtr0302081|FBtr0302081|FBtr0307287|FBtr0307287|FBtr0307286|FBtr0307286 8408006|8408006|8408006|8408006|8408006|8408006|8408006|8408006 8409752|8409752|8409752|8409752|8409752|8409752|8409752|8409752 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" X - 8408176 8408255 3'utr lawc FlyBase G49500.1 AAGAAGTTGGAAAATCATGTATTTACTCGGAAAGAAGCCAGAACTGAAGTAGCATACTTATTAGTATTATCAAATGATGA 13 8408205 0.963328561 6 13 73 1 1.204119983 0.125 0.230769231 0.375 13 0 0 16 X:8408176-8408255 6 6 5298 FBgn0262976 211.98 11.61333333 17.8 0.028304557 0.516647532 0.337078652 5 4 4.5 0.1 dme-miR-263a-5p 6mer3-8 GTGCCA X 8429129 8429134 + X_8429129_8429134_+ 0.999983781 1 0.999991891 1.15E-05 Trf2 FBtr0300577|FBtr0330106|FBtr0333811|FBtr0330105|FBtr0112927|FBtr0333750 8429114|8429114|8429114|8429114|8429114|8429114 8433011|8433011|8430195|8430195|8430195|8430195 X + 8429030 8429141 stop_codon Trf2 FlyBase G59811.1 AACAGACCAGCTTCTCGCCCAGCGAATTCGATGTTGATGACTTGATCGAGGAGGAGGAGAACAACGAATTGGATATGCCCTTCTAAGCTAGCGCTGCCCGTGCCAAAAAAAA 13 8429129 0.952630486 10 13 62 1 1.146128036 0.142857143 0.076923077 0.142857143 13 0 0 14 X:8429030-8429141 6 Trf2 FBtr0112927|FBtr0333750|FBtr0300577|FBtr0330106|FBtr0333811|FBtr0330105 8429114|8429114|8429114|8429114|8429114|8429114 8430195|8430195|8433011|8433011|8430195|8430195 GTGCCA 6mer3-8 dme-miR-263a-5p X + 8429097 8429144 stop_codon Trf2 FlyBase G45213.1 ATTGGATATGCCCTTCTAAGCTAGCGCTGCCCGTGCCAAAAAAAAATT 6 8429127 0.906291225 3 5 22 1 0.954242509 0 0.8 0.888888889 5 0 0 9 X:8429097-8429144 6 5.5 5299 FBgn0261793 2407.63 30.94 47.70333333 0.002284404 0.177763413 0.115295926 0 2 1 0.1 dme-miR-2b-2-5p 7mer-A1 TGAAGAA X 8429966 8429972 + X_8429966_8429972_+ 0.823349562 0.823316477 0.82333302 2.34E-05 Trf2 FBtr0300577|FBtr0330106|FBtr0333811|FBtr0330105|FBtr0112927|FBtr0333750 8429114|8429114|8429114|8429114|8429114|8429114 8433011|8433011|8430195|8430195|8430195|8430195 X + 8429909 8429988 3'utr Trf2 FlyBase G59818.1 ATCCGTGGAGAGGAGGTGGGGCCAGAGAAAAGCCCACTAGGATAGTTATCAATTATCTGAAGAACAACTGATTAATTTCT 20 8429980 0.97368226 10 18 102 0.928571429 1.414973348 0.071428571 0.3 0.5 20 2 0 26 X:8429909-8429988 7 Trf2 FBtr0112927|FBtr0333750|FBtr0300577|FBtr0330106|FBtr0333811|FBtr0330105 8429114|8429114|8429114|8429114|8429114|8429114 8430195|8430195|8433011|8433011|8430195|8430195 TGAAGAA 7mer-A1 dme-miR-2b-2-5p X + 8429952 8429985 3'utr Trf2 FlyBase G45218.1 AGTTATCAATTATCTGAAGAACAACTGATTAATT 9 8429980 0.647813594 4 9 48 1 1.204119983 0 0.666666667 0.8125 9 0 0 16 X:8429952-8429985 7 11 5300 FBgn0261793 2407.63 30.94 47.70333333 0.004568808 0.355526826 0.230591852 -14 -14 -14 0.1 dme-miR-276a-3p 6mer2-7 GTTCCT X 8430443 8430448 + X_8430443_8430448_+ 0.992528425 0.997526182 0.995027304 0.003533978 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 X + 8430418 8430462 3'utr Trf2 FlyBase G59822.1 CGCTTAAGTGTAGATTTACAAACTTGTTCCTGTGTTGTTAAAATC 189 8430443 0.745467116 12 184 2059 0.976851852 1.625312451 0.162037037 0.121693122 0.231481481 189 1 4 211 X:8430418-8430462 6 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 GTTCCT 6mer2-7 dme-miR-276a-3p X + 8430419 8430466 3'utr Trf2 FlyBase G45223.1 GCTTAAGTGTAGATTTACAAACTTGTTCCTGTGTTGTTAAAATCAGAA 121 8430442 0.76049186 9 115 1286 0.947916667 1.561101384 0.135416667 0.41322314 0.630208333 121 6 4 182 X:8430419-8430466 6 153.5 5301 FBgn0261793 2407.63 30.94 47.70333333 0.063755644 4.961215255 3.217804486 0 1 0.5 0.1 dme-miR-1003-3p 6mer3-8 ATGTGA X 8431242 8431247 + X_8431242_8431247_+ 0.674314367 1 0.837157183 0.230294496 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 X + 8431190 8431377 3'utr Trf2 FlyBase G59825.1 TGAAAGATATTGAACAGATCGGAGCCGAAATGTATTTTTTGTGTATGCGAATATGTGAATAGGTCGACGATGGCCGAAGAACGTGTTACAATTGCAAAATTAACTTAGCCACTAAGCATTAGTCTTAAGTTAGCTGACAAACTGAATACTAAATTGTAAGCCACAATGCATATAGCAATGTAAAAAAG 59 8431226 0.972669941 23 56 377 0.956521739 1.819543936 0.304347826 0.169491525 0.289855072 59 3 0 66 X:8431190-8431377 6 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 ATGTGA 6mer3-8 dme-miR-1003-3p X + 8431199 8431283 3'utr Trf2 FlyBase G45224.1 TTGAACAGATCGGAGCCGAAATGTATTTTTTGTGTATGCGAATATGTGAATAGGTCGACGATGGCCGAAGAACGTGTTACAATTG 33 8431227 0.93140162 13 32 204 0.979591837 1.380211242 0.306122449 0.363636364 0.571428571 33 0 1 48 X:8431199-8431283 6 9 5302 FBgn0261793 2407.63 30.94 47.70333333 0.003738116 0.290885585 0.188666061 16 15 15.5 0.1 dme-miR-14-3p 7mer-m8 AAGACTG X 8431992 8431998 + X_8431992_8431998_+ 0.671552017 0.671044556 0.671298286 0.000358786 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 X + 8431959 8432106 3'utr Trf2 FlyBase G59829.1 CAAATAGCATAATTCTGTTTTTGTTTTGCCGTAAAGACTGCATTATACCAACAATTAATTATATACAAACATAATAAATAATTAACTGATAAATGGGGCGAGTAAGCTTTGCAACTAAGCTGAGAACAAAACGGATGGATAAACATTT 73 8432001 0.981840352 17 71 510 0.965116279 1.919078092 0.023255814 0.164383562 0.290697674 73 3 0 83 X:8431959-8432106 7 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 AAGACTG 7mer-m8 dme-miR-14-3p X + 8431961 8432014 3'utr Trf2 FlyBase G45229.1 AATAGCATAATTCTGTTTTTGTTTTGCCGTAAAGACTGCATTATACCAACAATT 42 8432001 0.970298474 12 41 314 0.982758621 1.755874856 0 0.30952381 0.5 42 1 0 57 X:8431961-8432014 7 51 5303 FBgn0261793 2407.63 30.94 47.70333333 0.021182657 1.648351648 1.069107679 -9 -9 -9 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 8432299 8432304 + X_8432299_8432304_+ 0.988843802 0.928082787 0.958463294 0.042964515 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 X + 8432277 8432319 3'utr Trf2 FlyBase G59831.1 AAAAGCAAGATGAAATTACCTTACCAAAATGTGCTAGCCCTCG 5 8432293 0.886551134 3 5 27 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 X:8432277-8432319 6 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 8432274 8432320 3'utr Trf2 FlyBase G45230.1 ACGAAAAGCAAGATGAAATTACCTTACCAAAATGTGCTAGCCCTCGA 6 8432306 0.973596674 3 6 38 1 0.903089987 0.375 0.333333333 0.5 6 0 0 8 X:8432274-8432320 6 5.5 5304 FBgn0261793 2407.63 30.94 47.70333333 0.002284404 0.177763413 0.115295926 6 -7 -0.5 0.1 dme-miR-277-3p 6mer3-8 TGCATT X 8441353 8441358 - X_8441353_8441358_- 0.999999988 0.999999997 0.999999993 0 CG12123 FBtr0071245 8441245 8441410 X - 8441336 8441371 3'utr CG12123 FlyBase G65747.1 AAAAATTGTAAATTGCATTAGGTGGTCACGATTCGA 5 8441355 0.878273102 4 5 30 1 0.84509804 0.142857143 0.4 0.571428571 5 0 0 7 X:8441336-8441371 6 CG12123 FBtr0071245 8441245 8441410 TGCATT 6mer3-8 dme-miR-277-3p X - 8441341 8441370 3'utr CG12123 FlyBase G49507.1 AAAATTGTAAATTGCATTAGGTGGTCACGA 7 8441358 0.681940397 4 6 47 0.916666667 1.041392685 0 0.571428571 0.75 7 1 0 11 X:8441341-8441370 6 6 5305 FBgn0030039 53.33333333 6.263333333 9.543333333 0.1125 0.95795636 0.628711142 -3 0 -1.5 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 8448086 8448092 - X_8448086_8448092_- 0.823338831 0.82334866 0.823343746 7.00E-06 org-1 FBtr0345983|FBtr0071244 8447689|8447839 8448232|8448232 X - 8448064 8448106 3'utr org-1 FlyBase G65752.1 GTGTAAATCTCATGCCAAAGATTCGTTCTAAAATCAAGAATCT 11 8448094 0.944310903 2 9 79 0.833333333 1 0.25 0.090909091 0.166666667 11 2 0 10 X:8448064-8448106 7 org-1 FBtr0071244|FBtr0345983 8447839|8447689 8448232|8448232 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X - 8448074 8448108 3'utr org-1 FlyBase G49509.1 ATGTGTAAATCTCATGCCAAAGATTCGTTCTAAAA 8 8448094 0.854662071 2 7 47 0.916666667 1.041392685 0.166666667 0.5 0.666666667 8 1 0 11 X:8448074-8448108 7 9.5 5306 FBgn0021767 5 0.183333333 0.283333333 1.9 51.81818182 33.52941176 2 2 2 0.1 dme-miR-308-3p 7mer-m1 TGTGATT X 8555389 8555395 - X_8555389_8555395_- 0.442627413 0.443131017 0.442879215 0.000356099 IntS4 FBtr0071234 8555237 8555552 X - 8555366 8555421 3'utr IntS4 FlyBase G65758.2 GAGCAACTGTTATTTAAATATATGTATGTGATTGTTTAAGATACCATAGCAGTTGG 18 8555389 0.713278724 6 16 143 1 1.361727836 0.304347826 0.222222222 0.391304348 18 0 0 23 X:8555366-8555421 7 IntS4 FBtr0071234 8555237 8555552 TGTGATT 7mer-m1 dme-miR-308-3p X - 8555358 8555406 3'utr IntS4 FlyBase G49512.1 AAATATATGTATGTGATTGTTTAAGATACCATAGCAGTTGGTTGCCAAA 12 8555390 0.988335515 7 11 101 0.944444444 1.230448921 0 0.416666667 0.611111111 12 1 0 17 X:8555358-8555406 7 11.5 5307 FBgn0026679 250.3333333 8.63 13.06666667 0.045938748 1.332560834 0.880102041 -6 -5 -5.5 0.1 "dme-miR-995-3p,dme-miR-998-3p" 6mer2-7 GGTGCT X 8555524 8555529 - X_8555524_8555529_- 0.999589643 0.999890134 0.999739888 0.000212486 IntS4 FBtr0071234 8555237 8555552 X - 8555507 8555555 stop_codon IntS4 FlyBase G65759.1 TAGCCTGACTTCCAGGTAATGGACTAGGTGCTTTTTGTCCTGGCGACGC 9 8555536 0.822942665 3 9 69 1 0.954242509 0 0 0 9 0 0 9 X:8555507-8555555 6 IntS4 FBtr0071234 8555237 8555552 GGTGCT 6mer2-7 "dme-miR-995-3p,dme-miR-998-3p" X - 8555498 8555547 3'utr IntS4 FlyBase G49513.1 CTTCCAGGTAATGGACTAGGTGCTTTTTGTCCTGGCGACGCGGAGCGAGA 12 8555536 0.977001814 5 12 78 1 1.278753601 0.052631579 0.333333333 0.578947368 12 0 0 19 X:8555498-8555547 6 9.5 5308 FBgn0026679 250.3333333 8.63 13.06666667 0.037949401 1.100811124 0.727040816 7 7 7 0.1 dme-miR-283-5p 8mer-A1 TGATATTA X 8558901 8558908 - X_8558901_8558908_- 0.592192292 0.592192292 0.592192292 0 CG12112 FBtr0071233|FBtr0331727 8558877|8558877 8559220|8559220 X - 8558884 8558930 3'utr CG12112 FlyBase G65765.1 AATATAATTATTAAATGCCTGGTGATATTAGCATTATCACTCTTGTG 42 8558903 0.646701988 7 40 325 0.945454545 1.716003344 0.018181818 0.261904762 0.436363636 42 3 0 52 X:8558884-8558930 8 CG12112 FBtr0331727|FBtr0071233 8558877|8558877 8559220|8559220 TGATATTA 8mer-A1 dme-miR-283-5p X - 8558883 8558935 3'utr CG12112 FlyBase G49515.1 AAAATAATATAATTATTAAATGCCTGGTGATATTAGCATTATCACTCTTGTGA 28 8558902 0.662221473 8 27 228 1 1.602059991 0 0.285714286 0.5 28 0 0 40 X:8558883-8558935 8 34.5 5309 FBgn0030048 960.5366667 106.9333333 163.9633333 0.035917421 0.322630923 0.210412897 -5 -6 -5.5 0.1 dme-miR-988-3p 6mer3-8 ACAAGG X 8559186 8559191 - X_8559186_8559191_- 0.999478476 0.933759891 0.966619183 0.046470068 CG12112 FBtr0071233|FBtr0331727 8558877|8558877 8559220|8559220 X - 8559167 8559226 stop_codon CG12112 FlyBase G65767.1 TCATAACTGTGCCCATGTGAGATGACATAGTAGAAACAAGGATTTAAATATAAGTAATGA 50 8559183 0.724686506 9 49 263 0.965517241 1.748188027 0.206896552 0.16 0.275862069 50 2 0 56 X:8559167-8559226 6 CG12112 FBtr0331727|FBtr0071233 8558877|8558877 8559220|8559220 ACAAGG 6mer3-8 dme-miR-988-3p X - 8559099 8559223 stop_codon CG12112 FlyBase G49516.1 TAACTGTGCCCATGTGAGATGACATAGTAGAAACAAGGATTTAAATATAAGTAATGATTTACGGGCGAATCAATCCGAATTGAGGATGAATACCCAAATAGTGGTTGATGGATCATCATCACTTT 50 8559184 0.964030472 13 49 286 0.9875 1.897627091 0.125 0.4 0.625 50 1 0 79 X:8559099-8559223 6 34.5 5310 FBgn0030048 960.5366667 106.9333333 163.9633333 0.035917421 0.322630923 0.210412897 -8 -7 -7.5 0.1 dme-miR-263a-5p 7mer-A1 TGCCATA X 8567613 8567619 + X_8567613_8567619_+ 0.782906544 0.782911561 0.782909052 3.61E-06 Trf4-1 FBtr0112964|FBtr0331725 8566937|8566937 8570159|8570159 X + 8567583 8567624 3'utr Trf4-1 FlyBase G59860.1 CGTAACTAATTCCCTATCCACCCCATTTCCTGCCATACAAAA 24 8567609 0.722021287 3 24 138 1 1.531478917 0 0.375 0.558823529 24 0 0 34 X:8567583-8567624 7 Trf4-1 FBtr0331725|FBtr0112964 8566937|8566937 8570159|8570159 TGCCATA 7mer-A1 dme-miR-263a-5p X + 8567581 8567631 3'utr Trf4-1 FlyBase G45249.1 AACGTAACTAATTCCCTATCCACCCCATTTCCTGCCATACAAAAAAAAAAA 13 8567609 0.964592749 4 13 68 1 1.255272505 0 0.307692308 0.5 13 0 0 18 X:8567581-8567631 7 17.5 5311 FBgn0030049 670.8133333 17.65 27.06666667 0.026087734 0.991501416 0.646551724 4 4 4 0.1 dme-miR-980-5p 7mer-m1 AAAAACT X 8567795 8567801 + X_8567795_8567801_+ 0.765586651 0.765586433 0.765586542 2.12E-07 Trf4-1 FBtr0112964|FBtr0331725 8566937|8566937 8570159|8570159 X + 8567771 8567808 3'utr Trf4-1 FlyBase G59861.1 TGCGCAATGACCCTTGTAACTTCCAAAAACTCGTTTAA 10 8567789 0.651641957 4 10 61 1 1 0.1 0 0 10 0 0 10 X:8567771-8567808 7 Trf4-1 FBtr0331725|FBtr0112964 8566937|8566937 8570159|8570159 AAAAACT 7mer-m1 dme-miR-980-5p X + 8567777 8567804 3'utr Trf4-1 FlyBase G45250.1 ATGACCCTTGTAACTTCCAAAAACTCGT 6 8567789 0.654332315 2 6 32 1 1.041392685 0 0.833333333 0.909090909 6 0 0 11 X:8567777-8567804 7 8 5312 FBgn0030049 670.8133333 17.65 27.06666667 0.011925821 0.45325779 0.295566502 6 6 6 0.1 dme-miR-317-3p 6mer3-8 TGTGTT X 8567994 8567999 + X_8567994_8567999_+ 0.99999665 0.999999521 0.999998085 2.05E-06 Trf4-1 FBtr0112964|FBtr0331725 8566937|8566937 8570159|8570159 X + 8567927 8568013 3'utr Trf4-1 FlyBase G59863.1 AATTAAGGTAAAAAAAATTGTGAGCCTACTTAAATTGTTCGAACACATTGTCCAACCCCAAAGCAATTGTGTTTTAAAGCTAAAACA 32 8567993 0.85903393 10 32 186 1 1.556302501 0.055555556 0.125 0.222222222 32 0 0 36 X:8567927-8568013 6 Trf4-1 FBtr0331725|FBtr0112964 8566937|8566937 8570159|8570159 TGTGTT 6mer3-8 dme-miR-317-3p X + 8567923 8568011 3'utr Trf4-1 FlyBase G45252.1 TTATAATTAAGGTAAAAAAAATTGTGAGCCTACTTAAATTGTTCGAACACATTGTCCAACCCCAAAGCAATTGTGTTTTAAAGCTAAAA 20 8567994 0.950491038 7 18 119 0.923076923 1.380211242 0.384615385 0.25 0.423076923 20 2 0 24 X:8567923-8568011 6 13.5 5313 FBgn0030049 670.8133333 17.65 27.06666667 0.020124824 0.764872521 0.498768473 1 0 0.5 0.1 dme-miR-263a-5p 7mer-m1 TGCCATT X 8568162 8568168 + X_8568162_8568168_+ 0.765582115 0.765582789 0.765582452 4.95E-07 Trf4-1 FBtr0112964|FBtr0331725 8566937|8566937 8570159|8570159 X + 8568139 8568183 3'utr Trf4-1 FlyBase G59864.1 GTTGTGCATTTTGCATAGATTCCTGCCATTTGTTTGTATAGTTGT 137 8568158 0.835097401 4 134 1343 0.988636364 2.240549248 0.477272727 0.240875912 0.409090909 137 2 0 174 X:8568139-8568183 7 Trf4-1 FBtr0331725|FBtr0112964 8566937|8566937 8570159|8570159 TGCCATT 7mer-m1 dme-miR-263a-5p X + 8568138 8568187 3'utr Trf4-1 FlyBase G45253.1 TGTTGTGCATTTTGCATAGATTCCTGCCATTTGTTTGTATAGTTGTTCAC 83 8568158 0.830157771 4 82 791 0.992248062 2.10720997 0.457364341 0.385542169 0.604651163 83 1 0 128 X:8568138-8568187 7 109.5 5314 FBgn0030049 670.8133333 17.65 27.06666667 0.16323468 6.203966006 4.045566502 4 4 4 0.1 dme-bantam-3p 7mer-m8 TGATCTC X 8591045 8591051 - X_8591045_8591051_- 0.42676064 0.54803221 0.487396425 0.085751971 CG12659 FBtr0332627 8590773 8591302 X - 8590979 8591089 3'utr CG12659 FlyBase G65774.1 ATATATATATATATATGCATACACTGCCTAAAAGGAGATGATCTCTGTAAATTAGTTATAGAGATTTGTCACTAGTTTGACCGCAAAAATAGATTAGGTAATTCCAAGGTG 54 8591051 0.985209668 9 52 420 0.966666667 1.286306739 0.05 0.092592593 0.183333333 54 0 2 58 X:8590979-8591089 7 CG12659 FBtr0332627 8590773 8591302 TGATCTC 7mer-m8 dme-bantam-3p X - 8591024 8591095 3'utr CG12659 FlyBase G49523.1 ATTACCATATATATATATATATGCATACACTGCCTAAAAGGAGATGATCTCTGTAAATTAGTTATAGAGATT 32 8591044 0.793825522 9 30 240 0.906976744 1.591064607 0.046511628 0.15625 0.372093023 32 4 0 39 X:8591024-8591095 7 17.5 5315 FBgn0040929 86.03333333 12.17 18.70333333 0.203409531 1.437962202 0.935662092 0 -7 -3.5 0.1 dme-miR-34-5p 7mer-m8 CACTGCC X 8591062 8591068 - X_8591062_8591068_- 0.68150865 0.65765926 0.669583955 0.016864002 CG12659 FBtr0332627 8590773 8591302 X - 8590979 8591089 3'utr CG12659 FlyBase G65774.1 ATATATATATATATATGCATACACTGCCTAAAAGGAGATGATCTCTGTAAATTAGTTATAGAGATTTGTCACTAGTTTGACCGCAAAAATAGATTAGGTAATTCCAAGGTG 54 8591051 0.985209668 9 52 420 0.966666667 1.286306739 0.05 0.092592593 0.183333333 54 0 2 58 X:8590979-8591089 7 CG12659 FBtr0332627 8590773 8591302 CACTGCC 7mer-m8 dme-miR-34-5p X - 8591024 8591095 3'utr CG12659 FlyBase G49523.1 ATTACCATATATATATATATATGCATACACTGCCTAAAAGGAGATGATCTCTGTAAATTAGTTATAGAGATT 32 8591044 0.793825522 9 30 240 0.906976744 1.591064607 0.046511628 0.15625 0.372093023 32 4 0 39 X:8591024-8591095 7 13.5 5316 FBgn0040929 86.03333333 12.17 18.70333333 0.156915924 1.109285127 0.721796471 -17 -24 -20.5 0.1 dme-bantam-3p 6mer3-8 TGATCT X 8601159 8601164 + X_8601159_8601164_+ 0.999995794 0.999999997 0.999997895 2.97E-06 Crag FBtr0343356|FBtr0071219|FBtr0071220 8600627|8600627|8600627 8602036|8601231|8601231 X + 8601145 8601192 3'utr Crag FlyBase G59913.1 TTTTGTAAATGACTTGATCTTAACATTTAAGTACTTAACGATTTTTCG 14 8601161 0.986132383 6 12 123 0.894736842 1.230448921 0.052631579 0.357142857 0.526315789 14 2 0 17 X:8601145-8601192 6 Crag FBtr0343356|FBtr0071219|FBtr0071220 8600627|8600627|8600627 8602036|8601231|8601231 TGATCT 6mer3-8 dme-bantam-3p X + 8601083 8601177 3'utr Crag FlyBase G45290.1 CGAACTTTCCTAAGTGAAAGCCCCAACTTGACATGTGTTGCATTGTGAAAACATGCAAATGATTTTGTAAATGACTTGATCTTAACATTTAAGTA 12 8601159 0.986541982 9 12 92 1 1.255272505 0.055555556 0.333333333 0.555555556 12 0 0 18 X:8601083-8601177 6 9 5317 FBgn0025864 2284.02 39.50333333 60.84 0.003940421 0.227828875 0.147928994 -2 0 -1 0.1 dme-miR-305-3p 6mer3-8 ATGTGC X 8601554 8601559 + X_8601554_8601559_+ 0.999894987 0.999980773 0.99993788 6.07E-05 Crag FBtr0343356 8600627 8602036 X + 8601515 8601575 3'utr Crag FlyBase G59915.1 ATAATATAACGATACATATTCGTGTACATACAAAGCTATATGTGCGATCCTGTAAATCAGC 10 8601555 0.97910455 2 10 74 1 1.113943352 0.538461538 0.3 0.461538462 10 0 0 13 X:8601515-8601575 6 Crag FBtr0343356 8600627 8602036 ATGTGC 6mer3-8 dme-miR-305-3p X + 8601542 8601579 3'utr Crag FlyBase G45291.1 ATACAAAGCTATATGTGCGATCCTGTAAATCAGCATTG 8 8601555 0.960105042 3 8 50 1 0.954242509 0.333333333 0.125 0.222222222 8 0 0 9 X:8601542-8601579 6 8.5 5318 FBgn0025864 2284.02 39.50333333 60.84 0.003721509 0.215171715 0.139710717 -1 -1 -1 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA X 8602193 8602198 - X_8602193_8602198_- 0.79367955 0.801652313 0.797665931 0.005637621 Caf1-180 FBtr0071228 8602135 8602511 X - 8602168 8602223 3'utr Caf1-180 FlyBase G65777.1 ATGCAATAATACACTACCTACCTGATGATGATCTTTCATTTGATGGCGATTTTGGG 18 8602198 0.976497014 5 17 114 0.958333333 1.361727836 0 0.277777778 0.458333333 18 1 0 23 X:8602168-8602223 6 Caf1-180 FBtr0071228 8602135 8602511 TGATGA 6mer3-8 dme-miR-2a-2-5p X - 8602185 8602219 3'utr Caf1-180 FlyBase G49526.1 AATAATACACTACCTACCTGATGATGATCTTTCAT 10 8602197 0.782452257 3 10 61 1 1.113943352 0 0.3 0.461538462 10 0 0 13 X:8602185-8602219 6 12 5319 FBgn0030054 1600.7 48.52 75.10666667 0.00749672 0.247320692 0.159772768 0 -1 -0.5 0.1 dme-miR-277-3p 6mer3-8 TGCATT X 8688487 8688492 + X_8688487_8688492_+ 0.999999998 0.999936052 0.999968025 4.52E-05 CG11284 FBtr0071222|FBtr0331731|FBtr0331730|FBtr0345984|FBtr0331729 8688176|8688176|8688176|8688176|8688176 8688760|8688760|8688760|8688760|8688760 X + 8688411 8688567 3'utr CG11284 FlyBase G59935.1 TATATATATATATATATACGGAGTATTTACGATACGGATACGTGTATGGAATTTTAGTCGGAGCACGCGGTTGCCTTGCATTGAATATTTCAGAGAAATATCGGGCACAACTACTTAAGACATCTACAAGAGACGTAATCCTAACGTTTAAGTTATT 49 8688482 0.784323103 19 45 307 0.915254237 1.255272505 0.152542373 0.12244898 0.271186441 49 3 2 54 X:8688411-8688567 6 CG11284 FBtr0345984|FBtr0331730|FBtr0331731|FBtr0071222|FBtr0331729 8688176|8688176|8688176|8688176|8688176 8688760|8688760|8688760|8688760|8688760 TGCATT 6mer3-8 dme-miR-277-3p X + 8688411 8688549 3'utr CG11284 FlyBase G45304.1 TATATATATATATATATACGGAGTATTTACGATACGGATACGTGTATGGAATTTTAGTCGGAGCACGCGGTTGCCTTGCATTGAATATTTCAGAGAAATATCGGGCACAACTACTTAAGACATCTACAAGAGACGTAAT 34 8688481 0.819811544 15 30 210 0.916666667 1.166331422 0.291666667 0.264705882 0.479166667 34 2 2 44 X:8688411-8688549 6 17 5320 FBgn0030056 1071.946667 65.25333333 99.50666667 0.015858998 0.260523089 0.170842825 5 6 5.5 0.1 dme-miR-305-5p 7mer-A1 GTACAAA X 8712521 8712527 - X_8712521_8712527_- 0.782911399 0.782910527 0.782910963 6.36E-07 CG2004 FBtr0332958|FBtr0071281|FBtr0332960|FBtr0346167|FBtr0332957 8712470|8712470|8712470|8712470|8712470 8712597|8712597|8712597|8712597|8712597 X - 8712500 8712542 3'utr CG2004 FlyBase G65795.1 TGTAACCCATATAATGTACAAAACGTAACTCCAGATAATTAAA 7 8712528 0.945332781 3 7 34 1 0.954242509 0.111111111 0.142857143 0.333333333 7 0 0 9 X:8712500-8712542 7 CG2004 FBtr0332957|FBtr0332960|FBtr0346167|FBtr0332958|FBtr0071281 8712470|8712470|8712470|8712470|8712470 8712597|8712597|8712597|8712597|8712597 GTACAAA 7mer-A1 dme-miR-305-5p X - 8712512 8712539 3'utr CG2004 FlyBase G49537.1 AACCCATATAATGTACAAAACGTAACTC 5 8712528 0.657908897 2 5 20 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 X:8712512-8712539 7 6 5321 FBgn0030060 282.3166667 21.61333333 33.1 0.02125273 0.277606416 0.181268882 1 1 1 0.1 dme-miR-980-5p 6mer3-8 GAAAAA X 8716788 8716793 - X_8716788_8716793_- 0.886051619 0.999930575 0.942991097 0.080524613 l(1)G0020 FBtr0071280|FBtr0344164 8716711|8716711 8716819|8716946 X - 8716760 8716802 3'utr l(1)G0020 FlyBase G65808.1 GTTTGGGGGGAAAAAGAATGTGGATTTTAATTCTATAGAAAAG 7 8716772 0.763847003 6 7 53 1 0.84509804 0.571428571 0 0 7 0 0 7 X:8716760-8716802 6 l(1)G0020 FBtr0344164|FBtr0071280 8716711|8716711 8716946|8716819 GAAAAA 6mer3-8 dme-miR-980-5p X - 8716769 8716802 3'utr l(1)G0020 FlyBase G49544.1 GTTTGGGGGGAAAAAGAATGTGGATTTTAATTCT 10 8716778 0.637070934 5 9 65 0.944444444 0.929418926 0.666666667 0.5 0.722222222 10 0 1 17 X:8716769-8716802 6 8 5322 FBgn0027330 778.15 29.23666667 45.09666667 0.010280794 0.273629005 0.177396703 -21 -15 -18 0.1 dme-miR-980-5p 6mer2-7 AAAAAC X 8873056 8873061 - X_8873056_8873061_- 0.378020419 0.489456271 0.433738345 0.078797081 Moe FBtr0331601|FBtr0071269|FBtr0308193|FBtr0071274 8873010|8873010|8873010|8873010 8873946|8873946|8873946|8873946 X - 8873008 8873083 3'utr Moe FlyBase G65818.1 AAACAACAAAAAACTATTGTGAAAAAACCAAACAAAAAGTTTTTAAATTAAACAATAAAAATGTAAAACAACAAAA 95 8873067 0.91547082 6 89 294 0.948275862 1.439332694 0 0.168421053 0.318965517 95 3 3 110 X:8873008-8873083 6 Moe FBtr0308193|FBtr0071274|FBtr0331601|FBtr0071269 8873010|8873010|8873010|8873010 8873946|8873946|8873946|8873946 AAAAAC 6mer2-7 dme-miR-980-5p X - 8873031 8873084 3'utr Moe FlyBase G49549.1 CAAACAACAAAAAACTATTGTGAAAAAACCAAACAAAAAGTTTTTAAATTAAAC 65 8873067 0.907669541 3 63 199 0.968421053 1.486666573 0 0.369230769 0.568421053 65 1 2 92 X:8873031-8873084 6 76.5 5323 FBgn0011661 40921.94667 1697.71 2611.596667 0.001869413 0.045060699 0.029292425 6 6 6 0.1 dme-miR-277-3p 7mer-m8 TGCATTT X 8873294 8873300 - X_8873294_8873300_- 0.620204229 0.620204177 0.620204203 0 Moe FBtr0331601|FBtr0071269|FBtr0308193|FBtr0071274 8873010|8873010|8873010|8873010 8873946|8873946|8873946|8873946 X - 8873257 8873322 3'utr Moe FlyBase G65821.1 TACAACAAAACAAACAACTATTTGCATTTTCCCCCGTTATAATTATTATTTTTATTATTATATAAT 85 8873301 0.984996478 6 81 669 0.971153846 2.004321374 0 0.188235294 0.336538462 85 3 0 101 X:8873257-8873322 7 Moe FBtr0308193|FBtr0071274|FBtr0331601|FBtr0071269 8873010|8873010|8873010|8873010 8873946|8873946|8873946|8873946 TGCATTT 7mer-m8 dme-miR-277-3p X - 8873276 8873315 3'utr Moe FlyBase G49552.1 AAACAAACAACTATTTGCATTTTCCCCCGTTATAATTATT 50 8873301 0.70646742 4 48 401 0.971428571 1.531478917 0 0.34 0.528571429 50 1 1 68 X:8873276-8873315 7 65.5 5324 FBgn0011661 40921.94667 1697.71 2611.596667 0.001600608 0.038581383 0.025080442 1 1 1 0.1 dme-miR-307a-3p 8mer-A1 GGTTGTGA X 8898980 8898987 - X_8898980_8898987_- 0.674816528 0.674879377 0.674847952 4.45E-05 CG1885 FBtr0333606 8898552 8899226 X - 8898956 8899006 3'utr CG1885 FlyBase G65841.1 GTAGAAAATTTCGAGCTTTGGTTGTGATTCGATTCGATTGATTAGTTATCT 58 8898988 0.708201864 8 57 580 0.986111111 1.851258349 0.277777778 0.206896552 0.361111111 58 1 0 71 X:8898956-8899006 8 CG1885 FBtr0333606 8898552 8899226 GGTTGTGA 8mer-A1 dme-miR-307a-3p X - 8898952 8899007 3'utr CG1885 FlyBase G49569.1 TGTAGAAAATTTCGAGCTTTGGTTGTGATTCGATTCGATTGATTAGTTATCTTTAT 37 8898988 0.960006183 7 35 361 0.9375 1.352182518 0.208333333 0.297297297 0.458333333 37 2 1 45 X:8898952-8899007 8 47 5325 FBgn0030066 139.3333333 11.45 17.55333333 0.337320574 4.104803493 2.677554121 1 1 1 0.1 dme-miR-965-3p 7mer-A1 ACGCTTA X 8903415 8903421 + X_8903415_8903421_+ 0.82332958 0.823318899 0.82332424 7.57E-06 Rbm13 FBtr0346163|FBtr0071255 8903356|8903356 8903761|8903464 X + 8903403 8903441 3'utr Rbm13 FlyBase G59960.1 ACTTAGCTGTTAACGCTTATTGTTTAGCCGGTTAAGAAT 14 8903422 0.655924092 5 13 135 0.944444444 1.230448921 0.333333333 0.214285714 0.388888889 14 1 0 17 X:8903403-8903441 7 Rbm13 FBtr0071255|FBtr0346163 8903356|8903356 8903464|8903761 ACGCTTA 7mer-A1 dme-miR-965-3p X + 8903403 8903439 3'utr Rbm13 FlyBase G45332.1 ACTTAGCTGTTAACGCTTATTGTTTAGCCGGTTAAGA 12 8903423 0.616219647 5 11 110 0.875 1.146128036 0.25 0.25 0.4375 12 2 0 14 X:8903403-8903439 7 12.5 5326 FBgn0030067 1128.99 111.6733333 171.8733333 0.011071843 0.111933616 0.072727978 -7 -8 -7.5 0.1 dme-miR-190-5p 6mer3-8 ACATAT X 8905032 8905037 - X_8905032_8905037_- 0.999921207 0.999995445 0.999958326 5.25E-05 e(r) FBtr0071267|FBtr0333604|FBtr0310067|FBtr0071266|FBtr0333605 8904142|8904357|8904357|8904726|8904357 8905063|8905063|8905063|8905063|8905063 X - 8904991 8905063 3'utr e(r) FlyBase G65845.1 AGGGACGGCGATGCGACAAGATACATACATATAAAACCAAATAACACGATGATGCATGCATCAATGCGTGCAA 12 8905041 0.807881405 6 12 42 1 1.079181246 0.166666667 0 0 12 0 0 12 X:8904991-8905063 6 e(r) FBtr0333604|FBtr0310067|FBtr0071266|FBtr0333605|FBtr0071267 8904357|8904357|8904726|8904357|8904142 8905063|8905063|8905063|8905063|8905063 ACATAT 6mer3-8 dme-miR-190-5p X - 8905024 8905065 stop_codon e(r) FlyBase G49574.1 AAAGGGACGGCGATGCGACAAGATACATACATATAAAACCAA 7 8905042 0.938176824 3 5 20 0.692307692 0.954242509 0 0.571428571 0.769230769 7 4 0 9 X:8905024-8905065 6 5.5 5327 FBgn0011586 7031.946667 923.7566667 1422.636667 0.000782145 0.005953949 0.003866061 4 5 4.5 0.1 dme-miR-317-3p 8mer-A1 TGTGTTCA X 8973005 8973012 - X_8973005_8973012_- 0.631133415 0.631135479 0.631134447 1.48E-06 CG10962 FBtr0071263 8972906 8973203 X - 8973000 8973034 3'utr CG10962 FlyBase G65851.1 CGTTTCGTTTTATTTTTATTATTGTGTTCAGTTAC 50 8973013 0.766576934 3 49 665 0.984615385 1.806179974 0.030769231 0.24 0.415384615 50 1 0 64 X:8973000-8973034 8 CG10962 FBtr0071263 8972906 8973203 TGTGTTCA 8mer-A1 dme-miR-317-3p X - 8973000 8973050 3'utr CG10962 FlyBase G49578.1 CTGTTGGCACTCACCTCGTTTCGTTTTATTTTTATTATTGTGTTCAGTTAC 67 8973013 0.75951168 8 64 872 0.947916667 1.180890142 0.197916667 0.343283582 0.541666667 67 0 5 91 X:8973000-8973050 8 55.5 5328 FBgn0030073 904.93 102.5533333 154.9166667 0.061330711 0.541181824 0.358257127 1 1 1 0.1 dme-miR-12-5p 7mer-A1 ATACTCA X 8973081 8973087 - X_8973081_8973087_- 0.783589161 0.800476964 0.792033062 0.011941478 CG10962 FBtr0071263 8972906 8973203 X - 8973065 8973102 3'utr CG10962 FlyBase G65852.1 ATGACACACGGCGAGATACTCACATACCCCCCCACATT 29 8973078 0.961749815 2 29 64 1 1.51851394 0.03030303 0.137931034 0.242424242 29 0 0 33 X:8973065-8973102 7 CG10962 FBtr0071263 8972906 8973203 ATACTCA 7mer-A1 dme-miR-12-5p X - 8973063 8973102 3'utr CG10962 FlyBase G49579.1 ATGACACACGGCGAGATACTCACATACCCCCCCACATTTG 26 8973078 0.938274705 3 24 62 0.956521739 1.643452676 0.173913043 0.576923077 0.760869565 26 2 0 44 X:8973063-8973102 7 27 5329 FBgn0030073 904.93 102.5533333 154.9166667 0.029836562 0.263277644 0.174287251 -9 -9 -9 0.1 dme-miR-13b-2-5p 6mer3-8 TTTGAC X 9072608 9072613 - X_9072608_9072613_- 0.99343868 0.997917095 0.995677887 0.003166707 CG44325 FBtr0339661 9072293 9072906 X - 9072591 9072613 3'utr CG44325 FlyBase G65862.1 TTTGACCTTTTTTGCAAATTTTG 6 9072604 0.688614511 5 6 72 1 0.903089987 0 0.333333333 0.5 6 0 0 8 X:9072591-9072613 6 CG44325 FBtr0339661 9072293 9072906 TTTGAC 6mer3-8 dme-miR-13b-2-5p X - 9072591 9072613 3'utr CG44325 FlyBase G49589.1 TTTGACCTTTTTTGCAAATTTTG 7 9072604 0.691535957 4 6 85 0.777777778 0.84509804 0 0.285714286 0.444444444 7 2 0 7 X:9072591-9072613 6 6.5 5330 FBgn0265413 401.4 65.42666667 100.4933333 0.016193323 0.09934787 0.064680908 -9 -9 -9 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 9085739 9085745 + X_9085739_9085745_+ 0.800466865 0.800956465 0.800711665 0.000346199 APC4 FBtr0071285|FBtr0071285|FBtr0071285|FBtr0309872|FBtr0309872|FBtr0309872 9085700|9085700|9085700|9085700|9085700|9085700 9085867|9085867|9085867|9085867|9085867|9085867 X + 9085728 9085750 3'utr APC4 FlyBase G59975.1 ATTGATTGTTGTGTGATAACTTA 9 9085736 0.697389284 3 8 82 0.9375 0.875061263 0 0.444444444 0.6875 9 0 1 15 X:9085728-9085750 7 APC4 FBtr0071285|FBtr0071285|FBtr0071285|FBtr0309872|FBtr0309872|FBtr0309872 9085700|9085700|9085700|9085700|9085700|9085700 9085867|9085867|9085867|9085867|9085867|9085867 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X + 9085727 9085751 3'utr APC4 FlyBase G45344.1 TATTGATTGTTGTGTGATAACTTAA 9 9085737 0.660400306 4 9 81 1 1.176091259 0 0.555555556 0.733333333 9 0 0 15 X:9085727-9085751 7 9 5331 FBgn0052707 194.3333333 9.046666667 13.88 0.046312178 0.994841562 0.648414986 3 2 2.5 0.1 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA X 9088039 9088045 + X_9088039_9088045_+ 0.823345569 0.823349524 0.823347546 2.76E-06 CG32706 FBtr0071287 9088008 9088073 X + 9088023 9088049 3'utr CG32706 FlyBase G59979.1 CTTTGCTTCCAATGTCTACCTGACTGC 5 9088036 0.707473925 2 2 28 0.666666667 0.602059991 0.166666667 0.2 0.333333333 5 2 0 4 X:9088023-9088049 7 CG32706 FBtr0071287 9088008 9088073 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" X + 9088018 9088051 3'utr CG32706 FlyBase G45348.1 TAGACCTTTGCTTCCAATGTCTACCTGACTGCAA 5 9088037 0.931568935 3 5 35 1 0.698970004 0.2 0 0 5 0 0 5 X:9088018-9088051 7 4.5 5332 FBgn0052706 14.77333333 2.05 3.03 0.304602888 2.195121951 1.485148515 3 2 2.5 0.1 dme-miR-980-3p 8mer-A1 GGCAGCTA X 9093750 9093757 - X_9093750_9093757_- 0.668734105 0.668734236 0.668734171 7.07E-08 CG7766 FBtr0114594|FBtr0309250|FBtr0343319|FBtr0071351|FBtr0071352|FBtr0114595|FBtr0309251 9093610|9093610|9093610|9093610|9093610|9093610|9093610 9094242|9094242|9094242|9094242|9094242|9094242|9094242 X - 9093721 9093895 3'utr CG7766 FlyBase G65868.1 TGTACGTATGTGTTGAGACCTTGGAAAGATACTCCAAAACTGCACCCAAAAAACCGATCCTAACCCCGCCACACCACCCAGCCAATCCATTTAGTAAGCCAACCCATGCTGCTCGGATACAGATTTGTTTTTTGTACTGGCAGCTATTTTACAGCGACAACACTTTCGATTGTTT 47 9093758 0.987847864 16 45 396 0.961538462 1.698970004 0.153846154 0.106382979 0.192307692 47 2 0 50 X:9093721-9093895 8 CG7766 FBtr0114595|FBtr0309251|FBtr0071351|FBtr0071352|FBtr0309250|FBtr0343319|FBtr0114594 9093610|9093610|9093610|9093610|9093610|9093610|9093610 9094242|9094242|9094242|9094242|9094242|9094242|9094242 GGCAGCTA 8mer-A1 dme-miR-980-3p X - 9093715 9093775 3'utr CG7766 FlyBase G49592.1 AGATTTGTTTTTTGTACTGGCAGCTATTTTACAGCGACAACACTTTCGATTGTTTTAACTT 26 9093758 0.880291063 5 25 244 0.945945946 1.544068044 0.054054054 0.307692308 0.513513514 26 2 0 35 X:9093715-9093775 8 29 5333 FBgn0030087 549.9233333 13.47666667 20.56666667 0.052734624 2.151867425 1.410048622 1 1 1 0.1 dme-miR-1003-3p 7mer-A1 TGTGAGA X 9108152 9108158 + X_9108152_9108158_+ 0.545848493 0.519525975 0.532687234 0.018612818 Arfrp1 FBtr0071293 9107931 9108354 X + 9108141 9108167 3'utr Arfrp1 FlyBase G59997.1 TGTTAGAAAGCTGTGAGACTTCTGCAT 6 9108154 0.75587212 2 6 31 1 1 0.3 0.333333333 0.6 6 0 0 10 X:9108141-9108167 7 Arfrp1 FBtr0071293 9107931 9108354 TGTGAGA 7mer-A1 dme-miR-1003-3p X + 9108103 9108166 3'utr Arfrp1 FlyBase G45368.1 TTTTCGGTTAACTACTGCTGAGAAAATGAGGAAAACAATGTTAGAAAGCTGTGAGACTTCTGCA 6 9108154 0.949285294 3 6 29 1 0.903089987 0 0.166666667 0.375 6 0 0 8 X:9108103-9108166 7 5 5334 FBgn0030088 100.3333333 11.22666667 17.08666667 0.049833887 0.445368171 0.292625829 -2 -2 -2 0.1 dme-miR-14-3p 6mer2-7 AGACTG X 9116512 9116517 + X_9116512_9116517_+ 0.996724591 0.803118371 0.899921481 0.136900257 AP-1gamma FBtr0071298|FBtr0071294|FBtr0112965|FBtr0333808|FBtr0309254|FBtr0071296|FBtr0071297|FBtr0071295|FBtr0309255 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117739|9117739|9117739|9117741|9117741|9117739|9117739|9117739|9117744 X + 9116487 9116526 5'utr AP-1gamma FlyBase G60010.1 TCGGCGCACAGCGTTGTTCAGACTCAGACTGTTTGTTTTT 10 9116518 0.98424626 6 9 85 0.916666667 1.041392685 0.583333333 0.2 0.333333333 10 1 0 11 X:9116487-9116526 6 AP-1gamma FBtr0333808|FBtr0112965|FBtr0071294|FBtr0071298|FBtr0071295|FBtr0309255|FBtr0071297|FBtr0071296|FBtr0309254 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117741|9117739|9117739|9117739|9117739|9117744|9117739|9117739|9117741 AGACTG 6mer2-7 dme-miR-14-3p X + 9116457 9116523 5'utr AP-1gamma FlyBase G45377.1 AATCGCATCTAGATCAGAGCATTTTCCAAATCGGCGCACAGCGTTGTTCAGACTCAGACTGTTTGTT 8 9116518 0.982334466 4 8 57 1 1 0.6 0.25 0.4 8 0 0 10 X:9116457-9116523 6 8 5335 FBgn0030089 1732.843333 43.93 67.95333333 0.00461669 0.182107899 0.117727852 -6 -6 -6 0.1 dme-miR-184-3p 6mer2-7 CCGTCC X 9117048 9117053 + X_9117048_9117053_+ 0.999999981 0.999988828 0.999994405 7.92E-06 AP-1gamma FBtr0071298|FBtr0071294|FBtr0112965|FBtr0333808|FBtr0309254|FBtr0071296|FBtr0071297|FBtr0071295|FBtr0309255 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117739|9117739|9117739|9117741|9117741|9117739|9117739|9117739|9117744 X + 9117032 9117087 5'utr AP-1gamma FlyBase G60015.1 TAATTGTTTTTTTGTCCCGTCCTGAGACTCTTTGATCGGTTCCCGGCTTCTGTGGG 29 9117054 0.834023407 9 27 246 0.916666667 1.51851394 0.388888889 0.172413793 0.333333333 29 3 0 33 X:9117032-9117087 6 AP-1gamma FBtr0333808|FBtr0112965|FBtr0071294|FBtr0071298|FBtr0071295|FBtr0309255|FBtr0071297|FBtr0071296|FBtr0309254 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117741|9117739|9117739|9117739|9117739|9117744|9117739|9117739|9117741 CCGTCC 6mer2-7 dme-miR-184-3p X + 9117033 9117106 5'utr AP-1gamma FlyBase G45380.1 AATTGTTTTTTTGTCCCGTCCTGAGACTCTTTGATCGGTTCCCGGCTTCTGTGGGCCAGCCCCTGATATTCCTT 24 9117054 0.986595538 7 23 199 0.967741935 1.477121255 0.193548387 0.25 0.419354839 24 1 0 30 X:9117033-9117106 6 22 5336 FBgn0030089 1732.843333 43.93 67.95333333 0.012695897 0.500796722 0.323751594 -6 -6 -6 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA X 9117249 9117256 + X_9117249_9117256_+ 0.50012011 0.500118625 0.500119368 1.06E-06 AP-1gamma FBtr0071298|FBtr0071294|FBtr0112965|FBtr0333808|FBtr0309254|FBtr0071296|FBtr0071297|FBtr0071295|FBtr0309255 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117739|9117739|9117739|9117741|9117741|9117739|9117739|9117739|9117744 X + 9117221 9117286 5'utr AP-1gamma FlyBase G60016.1 ATGATGTATTGTTATTTCCTGTGCGCACGTACTTAAAGCGGAAAATCAGCAGCAACCAGAGAAAGT 53 9117236 0.993922077 10 35 449 0.661016949 1.113943352 0.322033898 0.094339623 0.186440678 53 18 2 39 X:9117221-9117286 8 AP-1gamma FBtr0333808|FBtr0112965|FBtr0071294|FBtr0071298|FBtr0071295|FBtr0309255|FBtr0071297|FBtr0071296|FBtr0309254 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117741|9117739|9117739|9117739|9117739|9117744|9117739|9117739|9117741 GTACTTAA 8mer-A1 dme-miR-252-5p X + 9117223 9117269 5'utr AP-1gamma FlyBase G45381.1 GATGTATTGTTATTTCCTGTGCGCACGTACTTAAAGCGGAAAATCAG 40 9117236 0.860504341 8 26 322 0.656716418 1.342422681 0.447761194 0.45 0.671641791 40 22 1 44 X:9117223-9117269 8 45.5 5337 FBgn0030089 1732.843333 43.93 67.95333333 0.026257423 1.035738675 0.669577161 13 13 13 0.1 dme-miR-2a-2-5p 8mer-A1 TGATGAGA X 9117456 9117463 + X_9117456_9117463_+ 0.6011238 0.6004749 0.60079935 0.000458842 AP-1gamma FBtr0071298|FBtr0071294|FBtr0112965|FBtr0333808|FBtr0309254|FBtr0071296|FBtr0071297|FBtr0071295|FBtr0309255 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117739|9117739|9117739|9117741|9117741|9117739|9117739|9117739|9117744 X + 9117418 9117507 5'utr AP-1gamma FlyBase G60018.1 TTAGTTGCCGTCGCCGAGATGAGATGAGATGATGATGATGATGAGACGATGGATATGGAAATGACGATGATGATGATGGGGGGCATCGAG 17 9117467 0.861172467 8 15 74 0.833333333 1.176091259 0.5 0.058823529 0.111111111 17 3 0 15 X:9117418-9117507 8 AP-1gamma FBtr0333808|FBtr0112965|FBtr0071294|FBtr0071298|FBtr0071295|FBtr0309255|FBtr0071297|FBtr0071296|FBtr0309254 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117741|9117739|9117739|9117739|9117739|9117744|9117739|9117739|9117741 TGATGAGA 8mer-A1 dme-miR-2a-2-5p X + 9117388 9117486 5'utr AP-1gamma FlyBase G45382.1 GGACGCAGCTTAGAACTATATATTAACTGATTAGTTGCCGTCGCCGAGATGAGATGAGATGATGATGATGATGAGACGATGGATATGGAAATGACGATG 12 9117459 0.965962931 6 11 63 1 1.255272505 0.555555556 0.333333333 0.555555556 12 0 0 18 X:9117388-9117486 8 8 5338 FBgn0030089 1732.843333 43.93 67.95333333 0.00461669 0.182107899 0.117727852 -11 -3 -7 0.1 dme-miR-980-3p 6mer2-7 GCAGCT X 9117570 9117575 + X_9117570_9117575_+ 0.99753915 0.998613521 0.998076336 0.000759716 AP-1gamma FBtr0071298|FBtr0071294|FBtr0112965|FBtr0333808|FBtr0309254|FBtr0071296|FBtr0071297|FBtr0071295|FBtr0309255 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117739|9117739|9117739|9117741|9117741|9117739|9117739|9117739|9117744 X + 9117547 9117627 5'utr AP-1gamma FlyBase G60019.1 TATTACGATTATAAATGAATTGCGCAGCTGTATGAGAAGGAAAGAGAGGGAGAGAGATAAGAAAATAATAACATTAACATA 78 9117567 0.91955567 9 71 297 0.925531915 1.337459261 0.319148936 0.153846154 0.29787234 78 4 3 87 X:9117547-9117627 6 AP-1gamma FBtr0333808|FBtr0112965|FBtr0071294|FBtr0071298|FBtr0071295|FBtr0309255|FBtr0071297|FBtr0071296|FBtr0309254 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117741|9117739|9117739|9117739|9117739|9117744|9117739|9117739|9117741 GCAGCT 6mer2-7 dme-miR-980-3p X + 9117553 9117628 5'utr AP-1gamma FlyBase G45383.1 GATTATAAATGAATTGCGCAGCTGTATGAGAAGGAAAGAGAGGGAGAGAGATAAGAAAATAATAACATTAACATAT 48 9117567 0.884982527 8 45 167 0.931506849 1.832508913 0.328767123 0.416666667 0.616438356 48 5 0 68 X:9117553-9117628 6 32 5339 FBgn0030089 1732.843333 43.93 67.95333333 0.018466759 0.728431596 0.47091141 3 3 3 0.1 dme-miR-1008-3p 6mer3-8 AGCTGT X 9151749 9151754 + X_9151749_9151754_+ 0.999999994 1 0.999999997 0 dalao FBtr0071300 9151671 9151976 X + 9151718 9151802 3'utr dalao FlyBase G60039.1 ATATATGAATCGATCCCTGGTGTTGTAACATAGCTGTCCCCTCCCGGAACTTCCGGAAGGCAAACAACCGGAATGCTCTTAACTT 26 9151748 0.946513453 9 23 153 0.85 1.531478917 0.1 0.384615385 0.6 26 6 0 34 X:9151718-9151802 6 dalao FBtr0071300 9151671 9151976 AGCTGT 6mer3-8 dme-miR-1008-3p X + 9151723 9151768 3'utr dalao FlyBase G45394.1 TGAATCGATCCCTGGTGTTGTAACATAGCTGTCCCCTCCCGGAACT 5 9151740 0.984429879 4 4 29 0.5 0.602059991 0.125 0.2 0.5 5 4 0 4 X:9151723-9151768 6 9 5340 FBgn0030093 788.6633333 35.47 53.86 0.011411713 0.253735551 0.167099889 1 9 5 0.1 dme-miR-277-3p 7mer-m8 TGCATTT X 9153073 9153079 - X_9153073_9153079_- 0.620204266 0.620204266 0.620204266 0 His3.3B FBtr0340343 9152521 9154111 X - 9152946 9153138 3'utr His3.3B FlyBase G65891.1 ACATAACGAAGGGATGGGCGTGACAGAGTTAGTTGATTAAATAAGATTTTAGATTTACATGCATTTTATACGTTTAGGCGGACGATAGAAGATGATTCTTCTTCGGGAGATGAAAAAAAGATATAAAGATGATTCAGCAATCAGATTAACTTACACATCTATAGATTTGGAAGAGCATCGAATAAAAATAACC 172 9153073 0.848434979 32 152 1447 0.905472637 1.658011397 0.164179104 0.156976744 0.278606965 172 16 3 182 X:9152946-9153138 7 His3.3B FBtr0340343 9152521 9154111 TGCATTT 7mer-m8 dme-miR-277-3p X - 9152949 9153134 3'utr His3.3B FlyBase G49612.1 AACGAAGGGATGGGCGTGACAGAGTTAGTTGATTAAATAAGATTTTAGATTTACATGCATTTTATACGTTTAGGCGGACGATAGAAGATGATTCTTCTTCGGGAGATGAAAAAAAGATATAAAGATGATTCAGCAATCAGATTAACTTACACATCTATAGATTTGGAAGAGCATCGAATAAAAATA 117 9153073 0.803406756 34 98 925 0.847058824 1.857332496 0.147058824 0.367521368 0.564705882 117 25 1 144 X:9152949-9153134 7 92.5 5341 FBgn0004828 21818.69667 1276.286667 1948.03 0.004239483 0.072475881 0.047483868 -6 -6 -6 0.1 dme-miR-305-5p 6mer3-8 AGTACA X 9153346 9153351 - X_9153346_9153351_- 0.999943529 0.998236879 0.999090204 0.001206748 His3.3B FBtr0340343|FBtr0071345|FBtr0071347|FBtr0071346 9152521|9153236|9153236|9153236 9154111|9154111|9154111|9154111 X - 9153287 9153479 3'utr His3.3B FlyBase G65893.1 GCGGACCGCCTGGCGGTGATTCCCGGATCTCTGGATGGGCGGCGAGGGCATGGCCGTCTGGCGATGCCACTGACGGCACGCGGCTTTTATGAAGATAATATCCATATATAACACCGAAGACCGAATCGAGTACACTTAACTTTACACTTACGTATATGCATATATATACATAAATACATATATATATAAATAT 985 9153344 0.932819763 33 960 5313 0.972555746 2.151523068 0.268439108 0.150253807 0.282161235 985 25 7 1134 X:9153287-9153479 6 His3.3B FBtr0071346|FBtr0071347|FBtr0071345|FBtr0340343 9153236|9153236|9153236|9152521 9154111|9154111|9154111|9154111 AGTACA 6mer3-8 dme-miR-305-5p X - 9153290 9153496 3'utr His3.3B FlyBase G49614.1 AAGGCGGACAGACGGTTGCGGACCGCCTGGCGGTGATTCCCGGATCTCTGGATGGGCGGCGAGGGCATGGCCGTCTGGCGATGCCACTGACGGCACGCGGCTTTTATGAAGATAATATCCATATATAACACCGAAGACCGAATCGAGTACACTTAACTTTACACTTACGTATATGCATATATATACATAAATACATATATATATAAA 610 9153344 0.95625141 28 588 3164 0.971891892 2.254789687 0.28972973 0.37704918 0.589189189 610 22 4 899 X:9153290-9153496 6 646 5342 FBgn0004828 21818.69667 1276.286667 1948.03 0.029607635 0.506155879 0.33161707 -7 -7 -7 0.1 dme-miR-33-5p 8mer-m1 CAATGCAC X 9156968 9156975 - X_9156968_9156975_- 0.662221449 0.652035997 0.657128723 0.007202165 Ost48 FBtr0071344 9156927 9157007 X - 9156935 9156992 3'utr Ost48 FlyBase G65898.1 AACTCAAATGTAACACACAATGCACTAAAATAAAGTTCTCTGCAGAGAGAAACCCACA 19 9156967 0.930232969 3 19 69 1 1.361727836 0.043478261 0.210526316 0.347826087 19 0 0 23 X:9156935-9156992 8 Ost48 FBtr0071344 9156927 9157007 CAATGCAC 8mer-m1 dme-miR-33-5p X - 9156963 9156992 3'utr Ost48 FlyBase G49621.1 AACTCAAATGTAACACACAATGCACTAAAA 10 9156967 0.927262937 2 9 32 0.933333333 0.84509804 0 0.4 0.6 10 0 1 14 X:9156963-9156992 8 14 5343 FBgn0014868 1360 108.53 164.8033333 0.010294118 0.128996591 0.084949738 -8 -8 -8 0.1 dme-bantam-3p 7mer-m8 TGATCTC X 9171625 9171631 + X_9171625_9171631_+ 0.661614858 0.661612032 0.661613445 2.05E-06 mei-P26 FBtr0333474|FBtr0333473|FBtr0333475 9170814|9170814|9170814 9189309|9189309|9175190 X + 9171581 9171657 3'utr mei-P26 FlyBase G60057.1 AAACCAATAACAGATGATAAACAAAATGCAACAAATACTATTTTTGATCTCTAATTTAAAAACAATTAGCGCTACTA 115 9171624 0.99202655 14 111 1231 0.965034965 1.838849091 0 0.2 0.356643357 115 4 1 138 X:9171581-9171657 7 mei-P26 FBtr0071303|FBtr0340341|FBtr0333475|FBtr0333473|FBtr0333474 9170814|9170814|9170814|9170814|9170814 9171659|9171659|9175190|9189309|9189309 TGATCTC 7mer-m8 dme-bantam-3p X + 9171604 9171643 3'utr mei-P26 FlyBase G45407.1 AAATGCAACAAATACTATTTTTGATCTCTAATTTAAAAAC 79 9171623 0.618583064 11 76 862 0.963636364 2.025305865 0 0.316455696 0.509090909 79 4 0 106 X:9171604-9171643 7 95 5344 FBgn0026206 3669.783333 46.77 72.34333333 0.025887087 2.031216592 1.313182509 1 2 1.5 0.1 dme-miR-79-3p 7mer-m8 TAGCTTT X 9171969 9171975 + X_9171969_9171975_+ 0.62018692 0.620180309 0.620183615 4.67E-06 mei-P26 FBtr0333474|FBtr0333473|FBtr0333475 9170814|9170814|9170814 9189309|9189309|9175190 X + 9171948 9171998 3'utr mei-P26 FlyBase G60058.2 TATATTGTTATATCGACCGATTAGCTTTTTTGTGCATACCCTTCCAGAATC 136 9171968 0.896928082 6 135 1345 1 2.227886705 0.337278107 0.213235294 0.366863905 136 0 0 169 X:9171948-9171998 7 mei-P26 FBtr0333475|FBtr0333473|FBtr0333474 9170814|9170814|9170814 9175190|9189309|9189309 TAGCTTT 7mer-m8 dme-miR-79-3p X + 9171921 9171991 3'utr mei-P26 FlyBase G45408.1 ATGTTACTTATTATCTATATAGACATATATATTGTTATATCGACCGATTAGCTTTTTTGTGCATACCCTTC 102 9171968 0.989417039 5 102 990 1 2.176091259 0.433333333 0.37254902 0.573333333 102 0 0 150 X:9171921-9171991 7 115.5 5345 FBgn0026206 3669.783333 46.77 72.34333333 0.031473248 2.469531751 1.596553472 1 1 1 0.1 dme-miR-965-3p 6mer3-8 TACGCT X 9172294 9172299 + X_9172294_9172299_+ 0.643231721 0.999057524 0.821144623 0.251606836 mei-P26 FBtr0333474|FBtr0333473|FBtr0333475 9170814|9170814|9170814 9189309|9189309|9175190 X + 9172261 9172338 3'utr mei-P26 FlyBase G60060.1 CAGAAAATAACAAAAACTGTTTAGGTTTTTCCTTACGCTGCTTATATAAGGTGATATCTATTTATATATAAATCTATA 28 9172307 0.989789074 10 28 276 1 1.491361694 0.064516129 0.071428571 0.161290323 28 0 0 31 X:9172261-9172338 6 mei-P26 FBtr0333475|FBtr0333473|FBtr0333474 9170814|9170814|9170814 9175190|9189309|9189309 TACGCT 6mer3-8 dme-miR-965-3p X + 9172282 9172328 3'utr mei-P26 FlyBase G45409.1 TAGGTTTTTCCTTACGCTGCTTATATAAGGTGATATCTATTTATATA 13 9172294 0.789784295 6 12 129 0.95 1.278753601 0 0.307692308 0.55 13 1 0 19 X:9172282-9172328 6 14 5346 FBgn0026206 3669.783333 46.77 72.34333333 0.003814939 0.299337182 0.193521633 -13 0 -6.5 0.1 dme-miR-263a-5p 7mer-A1 TGCCATA X 9172415 9172421 + X_9172415_9172421_+ 0.782911759 0.782911715 0.782911737 7.07E-08 mei-P26 FBtr0333474|FBtr0333473|FBtr0333475 9170814|9170814|9170814 9189309|9189309|9175190 X + 9172382 9172434 3'utr mei-P26 FlyBase G60061.1 ACATATATGTGAAATCCTATGACTATATGACTTTGCCATATAATATACAAAGC 12 9172413 0.992123385 6 8 96 0.714285714 1 0.071428571 0.083333333 0.214285714 12 4 0 10 X:9172382-9172434 7 mei-P26 FBtr0333475|FBtr0333473|FBtr0333474 9170814|9170814|9170814 9175190|9189309|9189309 TGCCATA 7mer-A1 dme-miR-263a-5p X + 9172371 9172430 3'utr mei-P26 FlyBase G45410.1 ATATATCTTAAACATATATGTGAAATCCTATGACTATATGACTTTGCCATATAATATACA 12 9172414 0.986068155 8 10 88 0.8125 0.812913357 0.125 0.333333333 0.5 12 2 1 13 X:9172371-9172430 7 7.5 5347 FBgn0026206 3669.783333 46.77 72.34333333 0.002043717 0.160359205 0.103672303 2 1 1.5 0.1 dme-miR-980-5p 7mer-m1 AAAAACT X 9173607 9173613 + X_9173607_9173613_+ 0.752450605 0.751435972 0.751943289 0.000717431 mei-P26 FBtr0333474|FBtr0333473|FBtr0333475 9170814|9170814|9170814 9189309|9189309|9175190 X + 9173558 9173620 3'utr mei-P26 FlyBase G60068.1 ATGTTAATCCCATCATTGGCATTTGTGTACCACAATGCGGCGCGGAGCTAAAAACTGTTTTAA 25 9173616 0.986497038 8 16 138 0.741935484 1.06069784 0.096774194 0.24 0.387096774 25 7 1 23 X:9173558-9173620 7 mei-P26 FBtr0333475|FBtr0333473|FBtr0333474 9170814|9170814|9170814 9175190|9189309|9189309 AAAAACT 7mer-m1 dme-miR-980-5p X + 9173536 9173636 3'utr mei-P26 FlyBase G45416.1 TGTTTTAAACAGCAAAAATCTTATGTTAATCCCATCATTGGCATTTGTGTACCACAATGCGGCGCGGAGCTAAAAACTGTTTTAAATCTTGTCATTTTTCT 21 9173616 0.983552774 9 18 148 0.928571429 1.414973348 0.035714286 0.285714286 0.464285714 21 2 0 26 X:9173536-9173636 7 16 5348 FBgn0026206 3669.783333 46.77 72.34333333 0.00435993 0.342099637 0.221167581 -9 -9 -9 0.1 dme-miR-282-5p 7mer-A1 GAGGCTA X 9173864 9173870 + X_9173864_9173870_+ 0.819952531 0.818333146 0.819142838 0.001145089 mei-P26 FBtr0333474|FBtr0333473|FBtr0333475 9170814|9170814|9170814 9189309|9189309|9175190 X + 9173778 9173877 3'utr mei-P26 FlyBase G60070.1 ACCATCATTTACTATTGTCATTATTATTAATTATTATTAATTATTATTATTATTATTATTGTTTAGTTTTTACGTTGTTACATTGTGAGGCTACACACAA 29 9173863 0.985569042 9 28 256 0.96875 1.190331698 0.0625 0.103448276 0.1875 29 0 1 31 X:9173778-9173877 7 mei-P26 FBtr0333475|FBtr0333473|FBtr0333474 9170814|9170814|9170814 9175190|9189309|9189309 GAGGCTA 7mer-A1 dme-miR-282-5p X + 9173834 9173882 3'utr mei-P26 FlyBase G45419.1 TATTGTTTAGTTTTTACGTTGTTACATTGTGAGGCTACACACAATTCTG 23 9173862 0.979367917 4 23 170 1 1.579783597 0.105263158 0.434782609 0.657894737 23 0 0 38 X:9173834-9173882 7 20.5 5349 FBgn0026206 3669.783333 46.77 72.34333333 0.005586161 0.438315159 0.283370963 1 2 1.5 0.1 dme-miR-277-3p 6mer3-8 TGCATT X 9174375 9174380 + X_9174375_9174380_+ 0.999971923 0.999999834 0.999985878 1.97E-05 mei-P26 FBtr0333474|FBtr0333473|FBtr0333475 9170814|9170814|9170814 9189309|9189309|9175190 X + 9174360 9174394 3'utr mei-P26 FlyBase G60072.1 AAAATCTTGTCGCGCTGCATTAACTACGGAAGTAT 6 9174379 0.870581671 2 5 38 0.833333333 0.698970004 0.166666667 0 0 6 1 0 5 X:9174360-9174394 6 mei-P26 FBtr0333475|FBtr0333473|FBtr0333474 9170814|9170814|9170814 9175190|9189309|9189309 TGCATT 6mer3-8 dme-miR-277-3p X + 9174311 9174389 3'utr mei-P26 FlyBase G45424.1 TTTCCTTAAACCACCTAAACTTTCCTTTCCATTTTCGCATAAATACTTTAAAATCTTGTCGCGCTGCATTAACTACGGA 5 9174367 0.983657077 5 5 42 1 0.698970004 0 0 0 5 0 0 5 X:9174311-9174389 6 4.5 5350 FBgn0026206 3669.783333 46.77 72.34333333 0.00122623 0.096215523 0.062203382 -4 8 2 0.1 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 9176121 9176127 + X_9176121_9176127_+ 0.823149945 0.823160275 0.82315511 7.35E-06 mei-P26 FBtr0333474|FBtr0333473 9170814|9170814 9189309|9189309 X + 9176086 9176139 3'utr mei-P26 FlyBase G60078.1 GCGAATGAAGGACGAACCTTTTGATAAAGATGCTGCCAAAGATTTTTTATACAA 12 9176118 0.976855653 5 12 77 1 1.204119983 0.0625 0.25 0.4375 12 0 0 16 X:9176086-9176139 7 mei-P26 FBtr0333473|FBtr0333474 9170814|9170814 9189309|9189309 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X + 9176091 9176140 3'utr mei-P26 FlyBase G45428.1 TGAAGGACGAACCTTTTGATAAAGATGCTGCCAAAGATTTTTTATACAAT 11 9176119 0.986456592 2 9 86 0.846153846 1.041392685 0 0.181818182 0.307692308 11 2 0 11 X:9176091-9176140 7 11 5351 FBgn0026206 3669.783333 46.77 72.34333333 0.002997452 0.2351935 0.152052712 3 2 2.5 0.1 dme-miR-965-3p 6mer2-7 ACGCTT X 9228908 9228913 - X_9228908_9228913_- 0.999999788 0.999995741 0.999997764 2.90E-06 CG12121 FBtr0071334 9228794 9229267 X - 9228831 9228935 3'utr CG12121 FlyBase G65936.1 AATCCGCTTAACGGAATACTGAACGCTTGTGACACCCAGGCCCTATCCTTGGTTTAAGATATACATATACATATAAATAAATACACTTATGTAATTACCTATAAT 21 9228907 0.964455243 8 21 117 1 1.342422681 0.272727273 0.047619048 0.090909091 21 0 0 22 X:9228831-9228935 6 CG12121 FBtr0071334 9228794 9229267 ACGCTT 6mer2-7 dme-miR-965-3p X - 9228844 9228939 3'utr CG12121 FlyBase G49658.1 AATGAATCCGCTTAACGGAATACTGAACGCTTGTGACACCCAGGCCCTATCCTTGGTTTAAGATATACATATACATATAAATAAATACACTTATGT 17 9228908 0.975830396 5 15 96 0.875 1.021189299 0 0.294117647 0.5 17 2 1 21 X:9228844-9228939 6 14.5 5352 FBgn0030109 1482.023333 60.82 93.35 0.009783922 0.238408418 0.155329405 -6 -5 -5.5 0.1 dme-miR-277-3p 6mer3-8 TGCATT X 9229219 9229224 - X_9229219_9229224_- 0.925698679 0.936676728 0.931187704 0.007762618 CG12121 FBtr0071334 9228794 9229267 X - 9229122 9229325 stop_codon CG12121 FlyBase G65938.1 CGATGATGAGCGCGAGAACCTGATTGCAAAGCGGGAATCAAGCCATGAGTACGATTAGGCCCCATAATGGAAGCCAATTGATCTGCATCACCAATATTCCCTGCATTAGTCCGTAGTCTATAGTCCCCGGAGTCTTGGATATAATGACTCAAATTCTGAGCTAGTACTTTACCATTACTTTAATATATTTGTTTTATGTTCAGC 921 9229229 0.986824025 31 914 7907 0.991743119 2.732795698 0.160550459 0.149837134 0.281651376 921 8 1 1081 X:9229122-9229325 6 CG12121 FBtr0071334 9228794 9229267 TGCATT 6mer3-8 dme-miR-277-3p X - 9229152 9229319 stop_codon CG12121 FlyBase G49661.1 TGAGCGCGAGAACCTGATTGCAAAGCGGGAATCAAGCCATGAGTACGATTAGGCCCCATAATGGAAGCCAATTGATCTGCATCACCAATATTCCCTGCATTAGTCCGTAGTCTATAGTCCCCGGAGTCTTGGATATAATGACTCAAATTCTGAGCTAGTACTTTACCA 485 9229229 0.966428878 27 478 3880 0.986436498 2.602059991 0.144266338 0.428865979 0.658446363 485 10 1 800 X:9229152-9229319 6 581 5353 FBgn0030109 1482.023333 60.82 93.35 0.392031614 9.552778691 6.223888591 5 5 5 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 923037 923043 - X_923037_923043_- 0.75972502 0.757722823 0.758723922 0.001415769 CG3711 FBtr0343361|FBtr0343361|FBtr0343361 922887|922887|922887 924213|924213|924213 X - 922984 923061 5'utr CG3711 FlyBase G63924.1 AATTCTTGTTTCCGAAATTGTGATAAATCAGTTTATTTATGATTGCATTGTGACTATGTTTAAGCAATATTTAAGAAT 37 923044 0.987956581 7 35 319 0.933333333 1.146128036 0.244444444 0.189189189 0.333333333 37 1 2 42 X:922984-923061 7 CG3711 FBtr0343361|FBtr0343361|FBtr0343361 922887|922887|922887 924213|924213|924213 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 923031 923059 5'utr CG3711 FlyBase G48188.1 TTCTTGTTTCCGAAATTGTGATAAATCAG 20 923044 0.814829715 2 20 159 1 1.505149978 0.375 0.4 0.625 20 0 0 32 X:923031-923059 7 26 5354 FBgn0040344 266.6666667 7.813333333 11.92 0.0975 3.327645051 2.181208054 1 1 1 0.1 dme-miR-305-5p 7mer-m8 AGTACAA X 923293 923299 - X_923293_923299_- 0.643249836 0.609836294 0.626543065 0.023626912 CG3711 FBtr0331303|FBtr0343361 923166|922887 924144|924213 X - 923251 923312 5'utr CG3711 FlyBase G63926.1 ATACTAATACCCAAGTACAACTTACTAGTTGATATAGATCTAAATCTACTCGTTTTAATTGG 6 923290 0.947407874 4 6 38 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 X:923251-923312 7 CG3711 FBtr0331303|FBtr0343361 923166|922887 924144|924213 AGTACAA 7mer-m8 dme-miR-305-5p X - 923268 923313 5'utr CG3711 FlyBase G48190.1 TATACTAATACCCAAGTACAACTTACTAGTTGATATAGATCTAAAT 9 923290 0.787640993 4 7 70 0.615384615 0.903089987 0 0.333333333 0.538461538 9 5 0 8 X:923268-923313 7 7 5355 FBgn0040344 266.6666667 7.813333333 11.92 0.02625 0.895904437 0.587248322 -9 -9 -9 0.1 dme-miR-988-3p 6mer2-7 CAAGGG X 923359 923364 - X_923359_923364_- 0.999955346 0.999967701 0.999961523 8.77E-06 CG3711 FBtr0331303|FBtr0343361 923166|922887 924144|924213 X - 923319 923372 5'utr CG3711 FlyBase G63927.1 TTATTTTGCAAGGGTCATAGGCTTATAGTCTCCGAAGTCCGAGGGTCTTCCCTT 11 923355 0.854067926 4 11 92 1 1.041392685 0.090909091 0 0 11 0 0 11 X:923319-923372 6 CG3711 FBtr0331303|FBtr0343361 923166|922887 924144|924213 CAAGGG 6mer2-7 dme-miR-988-3p X - 923343 923372 5'utr CG3711 FlyBase G48191.1 TTATTTTGCAAGGGTCATAGGCTTATAGTC 7 923356 0.838362812 3 7 55 1 1.113943352 0 0.428571429 0.692307692 7 0 0 13 X:923343-923372 6 7 5356 FBgn0040344 266.6666667 7.813333333 11.92 0.02625 0.895904437 0.587248322 -9 -8 -8.5 0.1 dme-bantam-3p 6mer3-8 TGATCT X 923743 923748 - X_923743_923748_- 0.999966764 0.999999997 0.999983381 2.35E-05 CG3711 FBtr0331303|FBtr0343361 923166|922887 924144|924213 X - 923726 923769 5'utr CG3711 FlyBase G63928.2 TATAGGTTTTGTTAAAACACTTGATCTTTAAACCTTATAGTTGC 41 923748 0.832309161 6 38 343 0.9375 1.352182518 0.0625 0.12195122 0.25 41 2 1 45 X:923726-923769 6 CG3711 FBtr0331303|FBtr0343361 923166|922887 924144|924213 TGATCT 6mer3-8 dme-bantam-3p X - 923724 923757 5'utr CG3711 FlyBase G48192.1 TAAAACACTTGATCTTTAAACCTTATAGTTGCAG 16 923748 0.767529471 4 14 134 0.869565217 1 0.173913043 0.3125 0.52173913 16 2 1 20 X:923724-923757 6 27.5 5357 FBgn0040344 266.6666667 7.813333333 11.92 0.103125 3.519624573 2.30704698 0 0 0 0.1 dme-miR-980-5p 6mer2-7 AAAAAC X 9246098 9246103 - X_9246098_9246103_- 0.999999982 1 0.999999991 0 amx FBtr0307281|FBtr0071331 9245913|9245913 9246206|9246206 X - 9246040 9246134 3'utr amx FlyBase G65962.1 ATGCAACCATTAGGAATAGCAAGATCTTCTCAAAAACGTGTACATAATTAATTAGGAAATGTATTTTATTAATAATGCCAAAAGTTCTTTTTTGT 30 9246105 0.882177299 9 29 193 0.970588235 1.51851394 0 0.133333333 0.235294118 30 1 0 33 X:9246040-9246134 6 amx FBtr0307281|FBtr0071331 9245913|9245913 9246206|9246206 AAAAAC 6mer2-7 dme-miR-980-5p X - 9246047 9246133 3'utr amx FlyBase G49675.1 TGCAACCATTAGGAATAGCAAGATCTTCTCAAAAACGTGTACATAATTAATTAGGAAATGTATTTTATTAATAATGCCAAAAGTTCT 14 9246106 0.969540756 6 14 83 1 1.278753601 0.105263158 0.214285714 0.421052632 14 0 0 19 X:9246047-9246133 6 15 5358 FBgn0000077 117.3333333 12.09666667 18.64666667 0.127840909 1.240011022 0.804433321 2 3 2.5 0.1 dme-miR-317-3p 7mer-m8 TGTGTTC X 9254901 9254907 + X_9254901_9254907_+ 0.661554893 0.661615645 0.661585269 4.29E-05 CG17754 FBtr0071315|FBtr0340122 9254354|9254354 9255031|9255802 X + 9254865 9255018 5'utr-coding CG17754 FlyBase G60111.1 AACTGCAGCTCACCTTCGCCTCGCCTCGCTCTCGTCTGTGTTCTGACATGATTCCCTGTGGTATGGCATACACCCAGAACTCACCCACTTTCCGCACCGCACACCCCAACCCAGTATTTTCCCCATAACTCTGCTCTTTTCGGCTTGAATCTAA 27 9254899 0.905039927 13 25 176 0.9375 1.477121255 0 0.185185185 0.3125 27 2 0 30 X:9254865-9255018 7 CG17754 FBtr0071315 9254354 9255031 TGTGTTC 7mer-m8 dme-miR-317-3p X + 9254866 9254933 5'utr-coding CG17754 FlyBase G45445.1 ACTGCAGCTCACCTTCGCCTCGCCTCGCTCTCGTCTGTGTTCTGACATGATTCCCTGTGGTATGGCAT 7 9254900 0.984101072 5 7 55 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 X:9254866-9254933 7 6 5359 FBgn0030114 175.6666667 7.656666667 11.80666667 0.034155598 0.783630823 0.508187465 2 1 1.5 0.1 dme-miR-8-3p 7mer-m8 CAGTATT X 9254976 9254982 + X_9254976_9254982_+ 0.626192298 0.62676877 0.626480534 0.000407647 CG17754 FBtr0071315 9254354 9255031 X + 9254865 9255018 5'utr-coding CG17754 FlyBase G60111.1 AACTGCAGCTCACCTTCGCCTCGCCTCGCTCTCGTCTGTGTTCTGACATGATTCCCTGTGGTATGGCATACACCCAGAACTCACCCACTTTCCGCACCGCACACCCCAACCCAGTATTTTCCCCATAACTCTGCTCTTTTCGGCTTGAATCTAA 27 9254983 0.905039927 13 25 176 0.9375 1.477121255 0 0.185185185 0.3125 27 2 0 30 X:9254865-9255018 7 CG17754 FBtr0071315 9254354 9255031 CAGTATT 7mer-m8 dme-miR-8-3p X + 9254952 9255016 3'utr CG17754 FlyBase G45446.1 CTTTCCGCACCGCACACCCCAACCCAGTATTTTCCCCATAACTCTGCTCTTTTCGGCTTGAATCT 10 9254983 0.956704103 3 10 56 1 1.230448921 0 0.5 0.705882353 10 0 0 17 X:9254952-9255016 7 7 5360 FBgn0030114 175.6666667 7.656666667 11.80666667 0.039848197 0.91423596 0.592885375 -7 -7 -7 0.1 dme-miR-317-3p 8mer-A1 TGTGTTCA X 9258195 9258202 + X_9258195_9258202_+ 0.63027185 0.628559218 0.629415534 0.001211062 ric8a FBtr0346166|FBtr0071317 9258082|9258082 9259202|9258670 X + 9258082 9258213 stop_codon ric8a FlyBase G60123.1 AAGCCACAAATGTATTGCGGGATCTGCTATGGCACAACTTCCAAATAGCTACCAAAAAATCACCTTAAACTCTGCATTTATTCCATAAGTTTACTGTCGAATGTAGCTTCGAATGTGTTCAAAAAGCAGATT 33 9258195 0.927909585 12 29 191 0.891891892 1.217483944 0.189189189 0.090909091 0.189189189 33 3 1 33 X:9258082-9258213 8 ric8a FBtr0071317|FBtr0346166 9258082|9258082 9258670|9259202 TGTGTTCA 8mer-A1 dme-miR-317-3p X + 9258175 9258208 3'utr ric8a FlyBase G45456.1 CTGTCGAATGTAGCTTCGAATGTGTTCAAAAAGC 10 9258195 0.676957862 4 10 66 1 1.113943352 0.153846154 0.2 0.384615385 10 0 0 13 X:9258175-9258208 8 13 5361 FBgn0028292 451.68 19.07666667 29.28333333 0.028781438 0.681460772 0.443938532 0 0 0 0.1 dme-miR-986-5p 8mer-A1 ATTCGAGA X 9258250 9258257 + X_9258250_9258257_+ 0.643557969 0.643554084 0.643556027 2.76E-06 ric8a FBtr0346166|FBtr0071317 9258082|9258082 9259202|9258670 X + 9258236 9258276 3'utr ric8a FlyBase G60124.1 ATTTTATACCACATATTCGAGAACATCTCATTATAACCTAC 11 9258266 0.744928111 4 9 64 0.8125 1.113943352 0 0.454545455 0.625 11 3 0 13 X:9258236-9258276 8 ric8a FBtr0071317|FBtr0346166 9258082|9258082 9258670|9259202 ATTCGAGA 8mer-A1 dme-miR-986-5p X + 9258241 9258275 3'utr ric8a FlyBase G45457.1 ATACCACATATTCGAGAACATCTCATTATAACCTA 9 9258266 0.632791542 3 9 50 1 1.041392685 0 0.222222222 0.363636364 9 0 0 11 X:9258241-9258275 8 10 5362 FBgn0028292 451.68 19.07666667 29.28333333 0.022139568 0.524200594 0.341491178 -16 -16 -16 0.1 dme-miR-252-5p 7mer-m8 GTACTTA X 9258459 9258465 + X_9258459_9258465_+ 0.588299914 0.588299907 0.58829991 0 ric8a FBtr0346166|FBtr0071317 9258082|9258082 9259202|9258670 X + 9258436 9258479 3'utr ric8a FlyBase G60126.1 AACCATTAACCATGTAGAACGTTGTACTTATTAAGTTATTACGC 12 9258458 0.97863072 3 12 125 1 1.113943352 0 0.083333333 0.153846154 12 0 0 13 X:9258436-9258479 7 ric8a FBtr0071317|FBtr0346166 9258082|9258082 9258670|9259202 GTACTTA 7mer-m8 dme-miR-252-5p X + 9258441 9258475 3'utr ric8a FlyBase G45459.1 TTAACCATGTAGAACGTTGTACTTATTAAGTTATT 7 9258458 0.80285385 3 7 70 1 1 0 0.285714286 0.5 7 0 0 10 X:9258441-9258475 7 9.5 5363 FBgn0028292 451.68 19.07666667 29.28333333 0.021032589 0.497990564 0.324416619 1 1 1 0.1 dme-miR-317-3p 8mer-A1 TGTGTTCA X 9259075 9259082 + X_9259075_9259082_+ 0.630787093 0.630928958 0.630858026 0.000100338 ric8a FBtr0346166 9258082 9259202 X + 9259045 9259101 3'utr ric8a FlyBase G60127.1 ATATACAAGAAATCCTATCTAGAGCTTTATTGTGTTCAATTTGCTATAGCGATGATA 41 9259074 0.99074126 2 41 449 1 1.716003344 0.461538462 0.195121951 0.365384615 41 0 0 52 X:9259045-9259101 8 ric8a FBtr0346166 9258082 9259202 TGTGTTCA 8mer-A1 dme-miR-317-3p X + 9259058 9259101 3'utr ric8a FlyBase G45460.1 CCTATCTAGAGCTTTATTGTGTTCAATTTGCTATAGCGATGATA 23 9259074 0.76109212 2 22 258 0.941176471 1.028028724 0.411764706 0.347826087 0.558823529 23 0 2 32 X:9259058-9259101 8 32 5364 FBgn0028292 451.68 19.07666667 29.28333333 0.070846617 1.677441901 1.09277177 1 1 1 0.1 dme-miR-14-3p 6mer3-8 AAGACT X 9275840 9275845 - X_9275840_9275845_- 0.924116498 0.780471721 0.85229411 0.101572212 c11.1 FBtr0343368|FBtr0071326 9275316|9275646 9276124|9276124 X - 9275827 9275906 3'utr c11.1 FlyBase G65971.1 TAATGCGGAGCGTTTTGCAGCTTTAAGACAGTTGGAAGTTATAGGAACTCGTATTCGACCGAAGACTTTGTTACGGACAA 17 9275838 0.941287786 10 17 115 1 1.278753601 0.157894737 0.117647059 0.210526316 17 0 0 19 X:9275827-9275906 6 c11.1 FBtr0071326|FBtr0343368 9275646|9275316 9276124|9276124 AAGACT 6mer3-8 dme-miR-14-3p X - 9275828 9275903 3'utr c11.1 FlyBase G49682.1 TGCGGAGCGTTTTGCAGCTTTAAGACAGTTGGAAGTTATAGGAACTCGTATTCGACCGAAGACTTTGTTACGGACA 12 9275838 0.720930034 6 12 84 1 1.230448921 0.176470588 0.333333333 0.529411765 12 0 0 17 X:9275828-9275903 6 8.5 5365 FBgn0040236 1095.22 21.73 33.33666667 0.007760998 0.391164289 0.254974503 -7 -7 -7 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA X 9325144 9325149 - X_9325144_9325149_- 0.999467488 0.999838453 0.99965297 0.000262337 CG34449 FBtr0308591|FBtr0343029|FBtr0343028|FBtr0112753 9324506|9324506|9324506|9324506 9331441|9327258|9327258|9327258 X - 9325083 9325153 3'utr CG34449 FlyBase G65996.1 AATTGTGCAAGGATCAAAACTTGTATAGACTATGCAGTAAGGTGCGCGACATAAGTGTCTGGAGCAGGCAG 15 9325121 0.968965714 4 14 87 1 1.230448921 0.117647059 0.066666667 0.176470588 15 0 0 17 X:9325083-9325153 6 CG34449 FBtr0343029|FBtr0308591|FBtr0343028|FBtr0112753 9324506|9324506|9324506|9324506 9327258|9331441|9327258|9327258 GTGCAA 6mer3-8 dme-miR-92b-3p X - 9325087 9325149 3'utr CG34449 FlyBase G49703.1 GTGCAAGGATCAAAACTTGTATAGACTATGCAGTAAGGTGCGCGACATAAGTGTCTGGAGCAG 12 9325121 0.970001789 3 12 71 1 1.230448921 0.294117647 0.333333333 0.529411765 12 0 0 17 X:9325087-9325149 6 4.5 5366 FBgn0085478 770.6366667 27.55 42.22 0.005839328 0.163339383 0.106584557 -28 -28 -28 0.1 dme-miR-2b-2-5p 6mer2-7 TGAAGA X 9326588 9326593 - X_9326588_9326593_- 0.823339068 0.733638492 0.77848878 0.063427903 CG34449 FBtr0308591|FBtr0343029|FBtr0343028|FBtr0112753 9324506|9324506|9324506|9324506 9331441|9327258|9327258|9327258 X - 9326520 9326640 3'utr CG34449 FlyBase G66001.1 GTTTAATGCTTTCTATATATAAATTGATCGATAACGAGAAATTAGAGTGAAGATGGAGATAAGAATATGAGATAAATTAAACACGAGCATGTGGATACAGATACAGTGCGTTTCATGGGTG 71 9326599 0.953795366 14 71 330 1 1.908485019 0.333333333 0.112676056 0.222222222 71 0 0 81 X:9326520-9326640 6 CG34449 FBtr0343029|FBtr0308591|FBtr0343028|FBtr0112753 9324506|9324506|9324506|9324506 9327258|9331441|9327258|9327258 TGAAGA 6mer2-7 dme-miR-2b-2-5p X - 9326568 9326620 3'utr CG34449 FlyBase G49708.1 AAATTGATCGATAACGAGAAATTAGAGTGAAGATGGAGATAAGAATATGAGAT 31 9326599 0.809747994 4 29 125 0.975609756 1.602059991 0.219512195 0.258064516 0.43902439 31 1 0 40 X:9326568-9326620 6 43.5 5367 FBgn0085478 770.6366667 27.55 42.22 0.056446834 1.578947368 1.030317385 6 6 6 0.1 dme-miR-34-5p 7mer-A1 ACTGCCA X 9358432 9358438 + X_9358432_9358438_+ 0.823349377 0.823349212 0.823349294 1.41E-07 BCL7-like FBtr0071358 9357680 9358594 X + 9358376 9358454 3'utr BCL7-like FlyBase G60146.1 AACCAGTAAACCTCTTTATAGTACACTTACCAACATAAATGTGACATTAACATTTAACTGCCAGCAGGGCGCGAAAAAT 27 9358429 0.701607745 7 24 148 0.939393939 1.190331698 0.272727273 0.148148148 0.303030303 27 1 1 31 X:9358376-9358454 7 BCL7-like FBtr0071358 9357680 9358594 ACTGCCA 7mer-A1 dme-miR-34-5p X + 9358380 9358474 3'utr BCL7-like FlyBase G45474.1 AGTAAACCTCTTTATAGTACACTTACCAACATAAATGTGACATTAACATTTAACTGCCAGCAGGGCGCGAAAAATATGCAAATGTTCGCTGAAGA 15 9358429 0.969032796 6 14 84 1 1.431363764 0.444444444 0.466666667 0.703703704 15 0 0 27 X:9358380-9358474 7 15.5 5368 FBgn0026149 221.2233333 16.18333333 24.75 0.070064942 0.957775489 0.626262626 3 3 3 0.1 dme-miR-92b-3p 6mer3-8 GTGCAA X 9358810 9358815 - X_9358810_9358815_- 0.999999011 0.999999863 0.999999437 6.36E-07 mgl FBtr0343369 9358494 9360313 X - 9358791 9358937 3'utr mgl FlyBase G66012.1 ATATATAAATATTTTATTTTTTAATTATATCATCGATTTATGAATTGTATTATGATTTATGATTTATCTTTCTCTTCGAAAGTCGAAATGTGTGTGCATTTTTTTTTTCATTTTCGTTCTCTGTGCAAAATCTGTGCTTCCCTTCAT 54 9358806 0.985338275 19 48 562 0.897058824 1.484299839 0.382352941 0.203703704 0.367647059 54 6 1 61 X:9358791-9358937 6 mgl FBtr0343369 9358494 9360313 GTGCAA 6mer3-8 dme-miR-92b-3p X - 9358774 9358864 3'utr mgl FlyBase G49711.1 CTTCGAAAGTCGAAATGTGTGTGCATTTTTTTTTTCATTTTCGTTCTCTGTGCAAAATCTGTGCTTCCCTTCATTTAAGCGTGTTTTAGCA 39 9358806 0.989924429 13 37 365 0.962962963 1.716003344 0.240740741 0.307692308 0.5 39 2 0 52 X:9358774-9358864 6 36.5 5369 FBgn0261260 1607.083333 11.89333333 18.17 0.022711952 3.068946188 2.008805724 -9 -9 -9 0.1 dme-miR-282-5p 6mer2-7 GAGGCT X 939244 939249 + X_939244_939249_+ 0.999276152 0.999134684 0.999205418 0.000100056 CG32815 FBtr0307181|FBtr0345512 938011|938011 939424|939424 X + 939220 939259 3'utr CG32815 FlyBase G57881.1 TACAGAGTAAGTTACGCAAAGTATGAGGCTTGCATTTACA 13 939244 0.852187287 3 13 73 1 1.204119983 0 0.153846154 0.3125 13 0 0 16 X:939220-939259 6 CG32815 FBtr0345512|FBtr0307181 938011|938011 939424|939424 GAGGCT 6mer2-7 dme-miR-282-5p X + 939228 939254 3'utr CG32815 FlyBase G43788.1 AAGTTACGCAAAGTATGAGGCTTGCAT 5 939243 0.657457466 2 5 23 1 0.903089987 0 0.6 0.75 5 0 0 8 X:939228-939254 6 9 5370 FBgn0052815 22.11333333 0.906666667 1.36 0.406994272 9.926470588 6.617647059 0 1 0.5 0.1 dme-miR-79-3p 7mer-m8 TAGCTTT X 939309 939315 - X_939309_939315_- 0.620031472 0.618676813 0.619354142 0.000957918 CG3704 FBtr0070188 939168 939463 X - 939277 939368 3'utr CG3704 FlyBase G63941.1 GTGTGTTCGTCACTTGCACCTCCGATATTTGGTTTGTATATATGGACTTAGTTTAGCTTTGCAAATTAGTGATAACATATACATATGGAGGA 43 939303 0.924611062 12 41 418 0.98245614 1.748188027 0.140350877 0.186046512 0.385964912 43 1 0 56 X:939277-939368 7 CG3704 FBtr0070188 939168 939463 TAGCTTT 7mer-m8 dme-miR-79-3p X - 939255 939385 3'utr CG3704 FlyBase G48199.1 AAAACATTCAATATAGTGTGTGTTCGTCACTTGCACCTCCGATATTTGGTTTGTATATATGGACTTAGTTTAGCTTTGCAAATTAGTGATAACATATACATATGGAGGATATATCCCGCTCGTAAATGTAA 44 939303 0.98851116 16 43 391 0.983870968 1.785329835 0.209677419 0.295454545 0.5 44 1 0 61 X:939255-939385 7 29 5371 FBgn0040346 168.8866667 13.69666667 21.07 0.171712786 2.11730348 1.376364499 -12 -12 -12 0.1 dme-miR-986-5p 6mer2-7 TTCGAG X 939417 939422 - X_939417_939422_- 0.99912091 0.999996913 0.999558912 0.000619426 CG3704 FBtr0070188 939168 939463 X - 939412 939465 stop_codon CG3704 FlyBase G63942.1 AAATGGGCGGATTGTGATCCTCGATGGCTATGGATTTCGTGATTTCGAGTTTTC 84 939441 0.76280874 11 81 720 0.981132075 2.017033339 0.528301887 0.226190476 0.386792453 84 2 0 104 X:939412-939465 6 CG3704 FBtr0070188 939168 939463 TTCGAG 6mer2-7 dme-miR-986-5p X - 939412 939472 stop_codon CG3704 FlyBase G48200.1 CAGCCGTAAATGGGCGGATTGTGATCCTCGATGGCTATGGATTTCGTGATTTCGAGTTTTC 61 939441 0.912546469 10 60 499 0.989130435 1.959041392 0.52173913 0.442622951 0.630434783 61 1 0 91 X:939412-939472 6 31.5 5372 FBgn0040346 168.8866667 13.69666667 21.07 0.186515612 2.299829642 1.495016611 19 19 19 0.1 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 942565 942570 + X_942565_942570_+ 0.888129195 0.869066721 0.878597958 0.013479223 mus81 FBtr0070170|FBtr0070170|FBtr0070170 942473|942473|942473 943229|943229|943229 X + 942519 942614 3'utr mus81 FlyBase G57884.1 GAGTTTATACATAAGTGAGAGAGAGAATACGTTGGACATTGAATAGTGTGATCTAGTCTAAGCCAAAAAATGTACAAGTCAGCCGCCCTTAGATGT 264 942551 0.751229806 15 256 1614 0.969491525 2.155336037 0.122033898 0.117870722 0.213559322 263 8 1 286 X:942519-942614 6 mus81 FBtr0070170|FBtr0070170|FBtr0070170 942473|942473|942473 943229|943229|943229 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X + 942482 942600 3'utr mus81 FlyBase G43791.1 AATTGATTTTATGGGACATATCTAAGGTTATATACACGAGTTTATACATAAGTGAGAGAGAGAATACGTTGGACATTGAATAGTGTGATCTAGTCTAAGCCAAAAAATGTACAAGTCAG 203 942551 0.976842124 16 195 1264 0.950331126 2.156851901 0.132450331 0.36453202 0.572847682 203 14 1 287 X:942482-942600 6 99 5373 FBgn0040347 59.78 3.366666667 5.13 1.656072265 29.40594059 19.29824561 14 14 14 0.1 dme-miR-2a-2-5p 6mer3-8 TGATGA X 9551195 9551200 - X_9551195_9551200_- 0.972886409 0.999674887 0.986280648 0.01894233 l(1)G0320 FBtr0343412 9551138 9551938 X - 9551171 9551297 3'utr l(1)G0320 FlyBase G66060.1 TTCTGATTTGGAGTGTATCATTCTTTTTCTGTTAAGACCAAAATATGTTGAAGTGAGTTTTTTTTTTAGCTAGAGAAGTCGCAGAAAGTCAGTCGACTGATGAATAATGAATAGATTTTCTTACAAC 74 9551205 0.864182957 17 71 409 0.955555556 1.457377197 0.1 0.202702703 0.344444444 74 2 2 86 X:9551171-9551297 6 l(1)G0320 FBtr0343412 9551138 9551938 TGATGA 6mer3-8 dme-miR-2a-2-5p X - 9551163 9551294 3'utr l(1)G0320 FlyBase G49732.1 TGATTTGGAGTGTATCATTCTTTTTCTGTTAAGACCAAAATATGTTGAAGTGAGTTTTTTTTTTAGCTAGAGAAGTCGCAGAAAGTCAGTCGACTGATGAATAATGAATAGATTTTCTTACAACAAAACAAA 47 9551205 0.95675495 12 45 224 0.971428571 1.832508913 0.128571429 0.340425532 0.557142857 47 2 0 68 X:9551163-9551294 6 44 5374 FBgn0028327 1065.626667 69.58 106.2833333 0.041290258 0.632365622 0.413987769 5 5 5 0.1 dme-miR-1012-3p 6mer3-8 TTGACT X 9555679 9555684 - X_9555679_9555684_- 0.999997968 0.998750439 0.999374204 0.000882186 CG15317 FBtr0071371 9555605 9555781 X - 9555634 9555707 3'utr CG15317 FlyBase G66070.1 TTATATATTAACTAACTGAGCTATTGACTTTTATTATAAAAATGTTACGTATATTTTCTGTGCAGCTCCAGCAG 179 9555677 0.8096055 11 177 1726 0.99122807 2.354108439 0.171052632 0.189944134 0.364035088 179 2 0 226 X:9555634-9555707 6 CG15317 FBtr0071371 9555605 9555781 TTGACT 6mer3-8 dme-miR-1012-3p X - 9555662 9555701 3'utr CG15317 FlyBase G49742.1 ATTAACTAACTGAGCTATTGACTTTTATTATAAAAATGTT 125 9555677 0.613556923 5 124 1201 0.989189189 2.26245109 0.259459459 0.368 0.572972973 125 2 0 183 X:9555662-9555701 6 148 5375 FBgn0030137 41 6.273333333 9.553333333 3.609756098 23.59192349 15.49197488 -7 -7 -7 0.1 dme-miR-190-5p 6mer3-8 ACATAT X 9555749 9555754 - X_9555749_9555754_- 0.982560559 0.998440185 0.990500372 0.011228573 CG15317 FBtr0071371 9555605 9555781 X - 9555724 9555848 stop_codon CG15317 FlyBase G66071.1 AGAAGCACGCATTACCCTTGGATTGGCCAAAATAGAGAGACTGTCCAGTTTTCCGCTGACTTTGTAGGGAAAATTAGGCTTAAGGAATATAGAAACATATGCACCTCAGTGGTTTTAAACCATAA 50 9555749 0.89043067 16 50 288 1 1.785329835 0.098360656 0.2 0.344262295 50 0 0 61 X:9555724-9555848 6 CG15317 FBtr0071371 9555605 9555781 ACATAT 6mer3-8 dme-miR-190-5p X - 9555721 9555804 stop_codon CG15317 FlyBase G49743.1 CCAGTTTTCCGCTGACTTTGTAGGGAAAATTAGGCTTAAGGAATATAGAAACATATGCACCTCAGTGGTTTTAAACCATAATTT 28 9555749 0.847130608 8 26 177 0.975609756 1.602059991 0.146341463 0.321428571 0.536585366 28 1 0 40 X:9555721-9555804 6 17 5376 FBgn0030137 41 6.273333333 9.553333333 0.414634146 2.709883103 1.779483601 -5 -5 -5 0.1 dme-miR-252-5p 8mer-A1 GTACTTAA X 9571917 9571924 - X_9571917_9571924_- 0.500096408 0.500096599 0.500096503 1.41E-07 CG32699 FBtr0110850 9571535 9573007 X - 9571858 9571948 3'utr CG32699 FlyBase G66082.1 GATCTAAACGACAGAGCACAGCCTGTACTTAAGTCAAGCCATCTTGGGCACACCCCAACCTCTCACACAGTCTGTTCTAAATATGTTATAA 21 9571925 0.98101319 4 20 108 0.961538462 1.096910013 0.230769231 0.19047619 0.346153846 21 0 1 25 X:9571858-9571948 8 CG32699 FBtr0110850 9571535 9573007 GTACTTAA 8mer-A1 dme-miR-252-5p X - 9571899 9571942 3'utr CG32699 FlyBase G49748.1 AACGACAGAGCACAGCCTGTACTTAAGTCAAGCCATCTTGGGCA 16 9571925 0.974578716 2 16 66 1 1.380211242 0.083333333 0.3125 0.541666667 16 0 0 24 X:9571899-9571942 8 16.5 5377 FBgn0052699 2538.573333 91.48333333 141.3333333 0.006499714 0.180360721 0.116745283 1 1 1 0.1 dme-miR-1006-3p 7mer-A1 GAATTTA X 9572113 9572119 - X_9572113_9572119_- 0.823317638 0.788813334 0.806065486 0.024398225 CG32699 FBtr0110850 9571535 9573007 X - 9572098 9572131 3'utr CG32699 FlyBase G66083.1 ATTGCTGAATTTGAATTTAAGGATCTCCGATCTG 7 9572115 0.845304947 5 7 54 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 X:9572098-9572131 7 CG32699 FBtr0110850 9571535 9573007 GAATTTA 7mer-A1 dme-miR-1006-3p X - 9572094 9572119 3'utr CG32699 FlyBase G49749.1 GAATTTAAGGATCTCCGATCTGTTGT 5 9572115 0.70810413 3 3 40 0.833333333 0.698970004 0.833333333 0.2 0.333333333 5 1 0 5 X:9572094-9572119 7 6 5378 FBgn0052699 2538.573333 91.48333333 141.3333333 0.002363532 0.065585717 0.04245283 -4 -4 -4 0.1 dme-miR-282-5p 6mer3-8 AGAGGC X 9572584 9572589 - X_9572584_9572589_- 0.998761802 0.999998408 0.999380105 0.000874408 CG32699 FBtr0110850 9571535 9573007 X - 9572571 9572625 3'utr CG32699 FlyBase G66085.1 ACTTAGAGGATATATAAACATGTATGTATCTCATTTAGAGGCAGGCAAATCAAAC 68 9572601 0.702815361 8 65 557 0.963414634 1.596597096 0.06097561 0.205882353 0.341463415 68 2 1 79 X:9572571-9572625 6 CG32699 FBtr0110850 9571535 9573007 AGAGGC 6mer3-8 dme-miR-282-5p X - 9572576 9572628 3'utr CG32699 FlyBase G49751.1 AAAACTTAGAGGATATATAAACATGTATGTATCTCATTTAGAGGCAGGCAAAT 53 9572601 0.814712527 6 51 445 0.973333333 1.86332286 0.026666667 0.320754717 0.52 53 2 0 73 X:9572576-9572628 6 43.5 5379 FBgn0052699 2538.573333 91.48333333 141.3333333 0.017135609 0.475496447 0.307783019 12 12 12 0.1 dme-miR-308-3p 7mer-m1 TGTGATT X 9572664 9572670 - X_9572664_9572670_- 0.521222959 0.521222003 0.521222481 7.07E-07 CG32699 FBtr0110850 9571535 9573007 X - 9572643 9572691 3'utr CG32699 FlyBase G66086.1 AAACGCAAGTCATTTCATCTTTGTGATTCTTATTATACACAACTATGTT 77 9572671 0.682805888 9 68 881 0.913978495 1.452297671 0.021505376 0.184210526 0.333333333 76 6 2 85 X:9572643-9572691 7 CG32699 FBtr0110850 9571535 9573007 TGTGATT 7mer-m1 dme-miR-308-3p X - 9572649 9572773 3'utr CG32699 FlyBase G49752.1 AGTTTCATGTGAACAAATGCTCACAGCACATAGATCCGGATCTGATTGCGCCCAGCTATGTTATTATTTATACTCGGACTCCAAACGCAAGTCATTTCATCTTTGTGATTCTTATTATACACAAC 86 9572671 0.928619987 15 81 724 0.952830189 1.402261382 0.094339623 0.197674419 0.349056604 86 2 3 101 X:9572649-9572773 7 59 5380 FBgn0052699 2538.573333 91.48333333 141.3333333 0.023241401 0.644926216 0.41745283 1 1 1 0.1 dme-miR-968-5p 6mer3-8 ACTACT X 9588566 9588571 + X_9588566_9588571_+ 0.967247593 1 0.983623796 0.023159444 Hex-A FBtr0333335 9587843 9589813 X + 9588539 9588568 3'utr Hex-A FlyBase G60168.1 AGAGCAAGTGAGAAAAGAAACTGTTATACT 5 9588562 0.618086538 2 5 21 1 0.77815125 0 0.2 0.333333333 5 0 0 6 X:9588539-9588568 3 Hex-A FBtr0333335 9587843 9589813 ACTACT 6mer3-8 dme-miR-968-5p X + 9588527 9588573 3'utr Hex-A FlyBase G45489.1 CGGAGATACTTAAGAGCAAGTGAGAAAAGAAACTGTTATACTACTGT 8 9588562 0.968416012 5 8 40 1 1.041392685 0.090909091 0.25 0.454545455 8 0 0 11 X:9588527-9588573 6 3.5 5381 FBgn0001186 1183.94 43.5 66.29 0.002956231 0.08045977 0.05279831 4 4 4 0.1 dme-miR-184-5p 6mer3-8 TGATAA X 9588828 9588833 + X_9588828_9588833_+ 0.99999296 0.998962708 0.999477834 0.000728532 Hex-A FBtr0333335 9587843 9589813 X + 9588759 9588844 3'utr Hex-A FlyBase G60169.1 CTAGGTAATGCTACGGTGTCCTTTCTGTAATTGTAAATGTTTATATAGAACCTATTACGAAGCGTTATATGATAATACTGCATACA 18 9588824 0.703602259 11 17 145 0.952380952 1.301029996 0.095238095 0.166666667 0.285714286 18 1 0 20 X:9588759-9588844 6 Hex-A FBtr0333335 9587843 9589813 TGATAA 6mer3-8 dme-miR-184-5p X + 9588756 9588837 3'utr Hex-A FlyBase G45490.1 TTACTAGGTAATGCTACGGTGTCCTTTCTGTAATTGTAAATGTTTATATAGAACCTATTACGAAGCGTTATATGATAATACT 18 9588823 0.802294235 9 15 131 0.823529412 1.447158031 0.294117647 0.611111111 0.794117647 18 6 0 28 X:9588756-9588837 6 8 5382 FBgn0001186 1183.94 43.5 66.29 0.006757099 0.183908046 0.120681852 4 5 4.5 0.1 dme-miR-1007-3p 6mer3-8 TGAGCT X 9589018 9589023 + X_9589018_9589023_+ 0.800999502 0.914268047 0.857633775 0.080092924 Hex-A FBtr0333335 9587843 9589813 X + 9588976 9589045 3'utr Hex-A FlyBase G60171.1 AAACTGTTTTTTTTTTTCCTTTTGATATAGAAACGCACTTTGTGAGCTATTATTTATGTAATTGTACATT 99 9589015 0.984468024 11 96 766 0.975 1.591064607 0.033333333 0.202020202 0.341666667 99 1 2 117 X:9588976-9589045 6 Hex-A FBtr0333335 9587843 9589813 TGAGCT 6mer3-8 dme-miR-1007-3p X + 9588945 9589042 3'utr Hex-A FlyBase G45492.1 ACACTTAAGCAGGTAAACTCTAAACAAAAATAAACTGTTTTTTTTTTTCCTTTTGATATAGAAACGCACTTTGTGAGCTATTATTTATGTAATTGTAC 56 9589015 0.987737718 14 53 472 0.92 1.537819095 0.053333333 0.214285714 0.413333333 56 5 1 69 X:9588945-9589042 6 71.5 5383 FBgn0001186 1183.94 43.5 66.29 0.060391574 1.643678161 1.078594056 3 3 3 0.1 dme-miR-184-3p 7mer-A1 CCGTCCA X 9604044 9604050 + X_9604044_9604050_+ 0.823343022 0.823345611 0.823344317 1.84E-06 Gga FBtr0071363 9604012 9604280 X + 9603978 9604069 stop_codon Gga FlyBase G60182.1 TCGATTGTGGCCAAAGGCATTGACTATGTGGACTAAAATACCCCGACATATAAGTATCACCCGCTCCCGTCCACTGAAAGCGCAGGAGGAAA 125 9604042 0.94823978 8 121 529 0.967532468 1.395035018 0.474025974 0.192 0.344155844 125 0 5 149 X:9603978-9604069 7 Gga FBtr0071363 9604012 9604280 CCGTCCA 7mer-A1 dme-miR-184-3p X + 9604029 9604268 3'utr Gga FlyBase G45496.1 AAGTATCACCCGCTCCCGTCCACTGAAAGCGCAGGAGGAAAATGAAAAGAACGAAAGACAGTCAATTTTCCCGCATCTATGTTGTGCTCCCCATTATCTTAAAGATACTTTTGGTTTTTCAATTTCTGTATTGTATGTGTATGTACGCTGATAAGATTTTTATTCAAATTGCATTTTGCATACAAACGATTTAGTCGTAATATAATTATGTATCAAAGGTTTATAAATTATGAAAAAGTC 98 9604042 0.952880804 17 94 443 0.95 2.123851641 0.514285714 0.316326531 0.521428571 98 7 0 133 X:9604029-9604268 7 91 5384 FBgn0030141 373.9333333 19.18333333 29.23 0.243358888 4.743701129 3.113239822 2 2 2 0.1 dme-miR-305-5p 7mer-m1 GTACAAT X 9604477 9604483 - X_9604477_9604483_- 0.763848553 0.765586663 0.764717608 0.001229022 Lst8 FBtr0071368 9604152 9604877 X - 9604467 9604529 3'utr Lst8 FlyBase G66103.1 AATTACGATCTATCTTAAGCCAGTTAAATCAACAAATATCTCAGATGTACAATCATCCGCAAA 9 9604501 0.975704172 6 8 50 0.888888889 0.903089987 0 0 0 9 1 0 8 X:9604467-9604529 7 Lst8 FBtr0071368 9604152 9604877 GTACAAT 7mer-m1 dme-miR-305-5p X - 9604468 9604502 3'utr Lst8 FlyBase G49764.1 ATCAACAAATATCTCAGATGTACAATCATCCGCAA 5 9604483 0.972030232 4 4 24 0.909090909 1 0 0.8 0.909090909 5 1 0 10 X:9604468-9604502 7 5.5 5385 FBgn0264691 581.5666667 40.63666667 62.58666667 0.009457213 0.135345747 0.087878142 18 0 9 0.1 dme-miR-283-5p 7mer-m8 TGATATT X 9621673 9621679 + X_9621673_9621679_+ 0.616452202 0.617178728 0.616815465 0.000513713 CG42797 FBtr0332963|FBtr0303708|FBtr0303709|FBtr0303710 9621666|9621666|9621666|9621666 9622441|9622441|9622166|9623243 X + 9621600 9621700 stop_codon CG42797 FlyBase G60188.1 CACCCGAACTGCTGTACGAGAAGCTGCTGCTGGCCGTCGAGGAGACCAACACGTTCGGCATTGAGTAGACACGTGATATTGCACCCACATACACATACACA 88 9621679 0.960154471 10 84 411 0.966101695 1.579783597 0.059322034 0.284090909 0.466101695 88 2 2 114 X:9621600-9621700 7 CG42797 FBtr0303710|FBtr0303709|FBtr0303708|FBtr0332963 9621666|9621666|9621666|9621666 9623243|9622166|9622441|9622441 TGATATT 7mer-m8 dme-miR-283-5p X + 9621649 9621700 stop_codon CG42797 FlyBase G45500.1 CACGTTCGGCATTGAGTAGACACGTGATATTGCACCCACATACACATACACA 59 9621679 0.755135479 4 58 255 0.988636364 1.638489257 0.011363636 0.389830508 0.590909091 59 0 1 87 X:9621649-9621700 7 70 5386 FBgn0261931 415.6266667 8.42 12.89333333 0.168420377 8.313539192 5.429162358 -6 -6 -6 0.1 dme-miR-965-3p 6mer2-7 ACGCTT X 9621751 9621756 + X_9621751_9621756_+ 1 1 1 0 CG42797 FBtr0332963|FBtr0303708|FBtr0303709|FBtr0303710 9621666|9621666|9621666|9621666 9622441|9622441|9622166|9623243 X + 9621732 9621775 5'utr CG42797 FlyBase G60189.1 ACACAAAACACGCGCCTAAACGCTTTATTTCGATTTTAGAAGTT 29 9621748 0.97936369 4 27 188 0.90625 1.462397998 0.1875 0.103448276 0.1875 29 3 0 29 X:9621732-9621775 6 CG42797 FBtr0303710|FBtr0303709|FBtr0303708|FBtr0332963 9621666|9621666|9621666|9621666 9623243|9622166|9622441|9622441 ACGCTT 6mer2-7 dme-miR-965-3p X + 9621728 9621767 5'utr CG42797 FlyBase G45501.1 AGATACACAAAACACGCGCCTAAACGCTTTATTTCGATTT 12 9621748 0.969116415 4 12 70 1 1.204119983 0 0.25 0.4375 12 0 0 16 X:9621728-9621767 6 20.5 5387 FBgn0261931 415.6266667 8.42 12.89333333 0.04932311 2.434679335 1.589968976 3 3 3 0.1 dme-miR-1002-5p 6mer3-8 CTACTT X 9622176 9622181 + X_9622176_9622181_+ 0.658745241 0.881110529 0.769927885 0.157236012 CG42797 FBtr0332963|FBtr0303708|FBtr0303710 9621666|9621666|9621666 9622441|9622441|9623243 X + 9622153 9622225 5'utr-coding CG42797 FlyBase G60191.1 ATGCCTAGCCATAGACAGACTTGCTACTTTAGGCATGGCATCCCACTAGTTTGTAGACAATTTGCCTTCGCCT 7 9622181 0.973934829 6 6 44 0.875 0.84509804 0.125 0.142857143 0.25 7 1 0 7 X:9622153-9622225 6 CG42797 FBtr0303710|FBtr0303708|FBtr0332963 9621666|9621666|9621666 9623243|9622441|9622441 CTACTT 6mer2-7 dme-miR-968-5p X + 9622133 9622193 5'utr-coding CG42797 FlyBase G45503.1 CAAAATTGTAAAGCAAATAAATGCCTAGCCATAGACAGACTTGCTACTTTAGGCATGGCAT 6 9622175 0.965650451 6 6 32 1 1.079181246 0 0.5 0.75 6 0 0 12 X:9622133-9622193 6 4 5388 FBgn0261931 415.6266667 8.42 12.89333333 0.009624022 0.475059382 0.310237849 -5 1 -2 0.1 dme-miR-1012-3p 6mer3-8 TTGACT X 9622346 9622351 + X_9622346_9622351_+ 0.999778845 0.999359747 0.999569296 0.000296348 CG42797 FBtr0332963|FBtr0303708|FBtr0303710 9621666|9621666|9621666 9622441|9622441|9623243 X + 9622239 9622370 3'utr CG42797 FlyBase G60192.1 ATTGAATGGAAGTTACCTCAAGAGCAAAACGGCTTGCCAGCGCCGCCAGTCATTAGTCCTAAGATCTACACGCCCCCGGATAATTTCTAAGCCTAAGTATCCTTCGCTTGACTCTGCCTGATTTACACTCGA 27 9622352 0.979009938 13 24 166 0.90625 0.985276743 0.03125 0.185185185 0.3125 27 1 2 29 X:9622239-9622370 6 CG42797 FBtr0303710|FBtr0303708|FBtr0332963 9621666|9621666|9621666 9623243|9622441|9622441 TTGACT 6mer3-8 dme-miR-1012-3p X + 9622328 9622364 3'utr CG42797 FlyBase G45505.1 AGCCTAAGTATCCTTCGCTTGACTCTGCCTGATTTAC 9 9622342 0.747596645 7 9 70 1 1.113943352 0.538461538 0.444444444 0.615384615 9 0 0 13 X:9622328-9622364 6 10 5389 FBgn0261931 415.6266667 8.42 12.89333333 0.024060054 1.187648456 0.775594623 -6 4 -1 0.1 dme-miR-968-5p 8mer-A1 ACTACTTA X 9623132 9623139 + X_9623132_9623139_+ 0.369125378 0.628689463 0.498907421 0.183539535 CG42797 FBtr0303710 9621666 9623243 X + 9623027 9623139 3'utr CG42797 FlyBase G60196.2 TTACATGTATTTTTGGCATTAGTTAATACGGAAAGCGACGGAGATGGAGAGAGACAGAGCTAAAGGCAGTGAAAGAGACAGAGAAAGAAAGATAACGCTTTTTGAACTACTTA 152 9623127 0.946362888 11 126 441 0.921348315 1.913813852 0.224719101 0.157894737 0.280898876 152 13 1 164 X:9623027-9623139 8 CG42797 FBtr0303710 9621666 9623243 ACTACTTA 8mer-A1 dme-miR-968-5p X + 9623050 9623132 3'utr CG42797 FlyBase G45509.1 TAATACGGAAAGCGACGGAGATGGAGAGAGACAGAGCTAAAGGCAGTGAAAGAGACAGAGAAAGAAAGATAACGCTTTTTGAA 89 9623127 0.94349867 7 77 226 0.916666667 1.605664116 0.318181818 0.393258427 0.590909091 89 9 2 121 X:9623050-9623132 1 24.5 5390 FBgn0261931 415.6266667 8.42 12.89333333 0.058947132 2.909738717 1.900206825 5 5 5 0.1 dme-miR-283-5p 6mer3-8 TGATAT X 9628972 9628977 - X_9628972_9628977_- 0.989106065 0.944873029 0.966989547 0.031277525 l(1)G0232 FBtr0071405|FBtr0333427|FBtr0071406|FBtr0100193|FBtr0071407|FBtr0100192|FBtr0303559|FBtr0071404|FBtr0303558 9628720|9628720|9628720|9626293|9626292|9628720|9628720|9628720|9626293 9629105|9629105|9629105|9629105|9629105|9629105|9629105|9629105|9629105 X - 9628956 9628999 3'utr l(1)G0232 FlyBase G66119.1 TCGACTAGATAGATGTTCGTCCTGATATGATATAATATGGTATA 11 9628977 0.980432118 5 11 73 1 1.278753601 0 0.636363636 0.789473684 11 0 0 19 X:9628956-9628999 6 l(1)G0232 FBtr0100193|FBtr0071406|FBtr0333427|FBtr0071405|FBtr0303558|FBtr0071404|FBtr0303559|FBtr0071407|FBtr0100192 9626293|9628720|9628720|9628720|9626293|9628720|9628720|9626292|9628720 9629105|9629105|9629105|9629105|9629105|9629105|9629105|9629105|9629105 TGATAT 6mer3-8 dme-miR-283-5p X - 9628950 9629015 3'utr l(1)G0232 FlyBase G49777.1 GGAGTTGTAACTTTCTTCGACTAGATAGATGTTCGTCCTGATATGATATAATATGGTATATATGAT 16 9628977 0.972570574 10 15 129 0.956521739 1.041392685 0.217391304 0.3125 0.52173913 16 0 1 22 X:9628950-9629015 6 11.5 5391 FBgn0028341 422.0033333 16.54 25.49666667 0.02725097 0.69528416 0.451039352 0 0 0 0.1 dme-miR-308-3p 7mer-m1 TGTGATT X 9666507 9666513 - X_9666507_9666513_- 0.521223855 0.521223852 0.521223853 0 nej FBtr0333521|FBtr0302723 9665671|9665440 9669706|9669706 X - 9666501 9666544 3'utr nej FlyBase G66134.1 AGAGAAAGAGAGAGCATATTCCAAAACTATTTGTGATTACAATT 22 9666515 0.968020355 5 22 123 1 1.462397998 0.172413793 0.272727273 0.448275862 22 0 0 29 X:9666501-9666544 7 nej FBtr0333521|FBtr0302723 9665671|9665440 9669706|9669706 TGTGATT 7mer-m1 dme-miR-308-3p X - 9666467 9666543 3'utr nej FlyBase G49788.1 GAGAAAGAGAGAGCATATTCCAAAACTATTTGTGATTACAATTATATATGATGATGATGAAGAGGAAGAAAGCGGAA 26 9666514 0.976159546 7 25 161 0.972972973 1.255272505 0.135135135 0.346153846 0.540540541 26 0 1 36 X:9666467-9666543 7 16.5 5392 FBgn0261617 2552.683333 20.01666667 30.83666667 0.006463786 0.824313072 0.535077289 2 1 1.5 0.1 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA X 9667476 9667481 - X_9667476_9667481_- 0.999899842 0.98270249 0.991301166 0.012160327 nej FBtr0333521|FBtr0333521|FBtr0302723|FBtr0302723 9665671|9665671|9665440|9665440 9669706|9669706|9669706|9669706 X - 9667410 9667491 3'utr nej FlyBase G66138.1 ATTTACCGATTACTTACTGATAGGTGTAGTAGGTCACTCGTACGCGAAAGTTGGTTAAATCCAATGCCTAGTTCGTAAGCCG 14 9667480 0.984048475 8 14 116 1 1.278753601 0.421052632 0.357142857 0.526315789 14 0 0 19 X:9667410-9667491 6 nej FBtr0333521|FBtr0333521|FBtr0302723|FBtr0302723 9665671|9665671|9665440|9665440 9669706|9669706|9669706|9669706 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" X - 9667408 9667486 3'utr nej FlyBase G49789.1 CCGATTACTTACTGATAGGTGTAGTAGGTCACTCGTACGCGAAAGTTGGTTAAATCCAATGCCTAGTTCGTAAGCCGAG 10 9667476 0.973016997 8 10 61 1 1.230448921 0.411764706 0.3 0.588235294 10 0 0 17 X:9667408-9667486 6 5 5393 FBgn0261617 2552.683333 20.01666667 30.83666667 0.001958723 0.24979184 0.162144633 -1 -5 -3 0.1 dme-miR-34-5p 6mer3-8 CACTGC X 9667624 9667629 - X_9667624_9667629_- 0.999997898 0.999999935 0.999998917 1.41E-06 nej FBtr0333521|FBtr0302723 9665671|9665440 9669706|9669706 X - 9667593 9667700 3'utr nej FlyBase G66139.1 GACAGCAAGAGAGCGAGACAGTAGATGAGCAGGAGAGGATTTTGTAAATTTTAGATACTAGGATACTTATTCACTGCGCATAAAAATGCCTTCAATTGCGACATCAGC 20 9667613 0.959421575 7 20 107 1 1.431363764 0.37037037 0.35 0.518518519 20 0 0 27 X:9667593-9667700 6 nej FBtr0333521|FBtr0302723 9665671|9665440 9669706|9669706 CACTGC 6mer3-8 dme-miR-34-5p X - 9667594 9667693 3'utr nej FlyBase G49790.1 AGAGAGCGAGACAGTAGATGAGCAGGAGAGGATTTTGTAAATTTTAGATACTAGGATACTTATTCACTGCGCATAAAAATGCCTTCAATTGCGACATCAG 19 9667614 0.964004892 8 19 105 1 1.414973348 0.153846154 0.315789474 0.5 19 0 0 26 X:9667594-9667693 6 10 5394 FBgn0261617 2552.683333 20.01666667 30.83666667 0.003917446 0.49958368 0.324289266 -16 -15 -15.5 0.1 dme-miR-305-3p 7mer-m8 ATGTGCC X 9668813 9668819 - X_9668813_9668819_- 0.674515655 0.674515654 0.674515654 0 nej FBtr0333521|FBtr0302723 9665671|9665440 9669706|9669706 X - 9668795 9668828 3'utr nej FlyBase G66145.1 ATAGTGAACATGTGCCTGTTGGCGATCGGCAGTT 8 9668818 0.696456039 4 8 48 1 1 0 0.125 0.3 8 0 0 10 X:9668795-9668828 7 nej FBtr0333521|FBtr0302723 9665671|9665440 9669706|9669706 ATGTGCC 7mer-m8 dme-miR-305-3p X - 9668797 9668837 3'utr nej FlyBase G49797.1 ATATAGCCTATAGTGAACATGTGCCTGTTGGCGATCGGCAG 5 9668818 0.936083545 3 4 33 0.833333333 0.698970004 0 0.2 0.333333333 5 1 0 5 X:9668797-9668837 7 6 5395 FBgn0261617 2552.683333 20.01666667 30.83666667 0.002350468 0.299750208 0.19457356 -1 -1 -1 0.1 dme-miR-278-3p 6mer3-8 CCCACC X 9669409 9669414 - X_9669409_9669414_- 0.99922796 1 0.99961398 0.000545886 nej FBtr0333521|FBtr0302723 9665671|9665440 9669706|9669706 X - 9669295 9669454 3'utr nej FlyBase G66149.2 AACAAATATCGCGCCTAATGTGTACTGTAGATTAAGATGACCCACCATTACAACCACTAACAAATACCTTATTATTTAAGTTTAAGACGAAAGTTGGACAGAGCATTATGATTCGATTTCCATTTTATGTCCGCGATTTAGCAAATATATAATATCATAT 62 9669435 0.823744238 25 56 420 0.876712329 1.806179974 0.136986301 0.14516129 0.273972603 62 9 0 64 X:9669295-9669454 6 nej FBtr0333521|FBtr0302723 9665671|9665440 9669706|9669706 CCCACC 6mer3-8 dme-miR-278-3p X - 9669303 9669448 3'utr nej FlyBase G49799.2 TATCGCGCCTAATGTGTACTGTAGATTAAGATGACCCACCATTACAACCACTAACAAATACCTTATTATTTAAGTTTAAGACGAAAGTTGGACAGAGCATTATGATTCGATTTCCATTTTATGTCCGCGATTTAGCAAATATATAA 41 9669435 0.981871535 15 39 276 0.968253968 1.785329835 0.26984127 0.365853659 0.587301587 41 2 0 61 X:9669303-9669448 6 6.5 5396 FBgn0261617 2552.683333 20.01666667 30.83666667 0.00254634 0.324729392 0.210788023 21 21 21 0.1 dme-miR-14-3p 7mer-A1 AGACTGA X 9669618 9669624 - X_9669618_9669624_- 0.823349562 0.823349562 0.823349562 0 nej FBtr0333521|FBtr0302723|FBtr0071402|FBtr0302722 9665671|9665440|9669513|9669513 9669706|9669706|9669706|9669706 X - 9669529 9669660 5'utr nej FlyBase G66150.1 ATGGTTGGTAGGCGATGTGGCTAGAGGGCTAGGGCTAGACTGAATGAATGAATGAGTGTCCAGTAGCCGCAGACGGGATGACGACGAAGACCAACCGGCAGGGATAACCAGTGTGTGTTAAGCGAATTAACA 53 9669625 0.904449717 15 49 208 0.925373134 1.792391689 0.373134328 0.226415094 0.388059701 53 5 0 62 X:9669529-9669660 7 nej FBtr0071402|FBtr0302722|FBtr0333521|FBtr0302723 9669513|9669513|9665671|9665440 9669706|9669706|9669706|9669706 AGACTGA 7mer-A1 dme-miR-14-3p X - 9669569 9669664 5'utr nej FlyBase G49801.1 TACAATGGTTGGTAGGCGATGTGGCTAGAGGGCTAGGGCTAGACTGAATGAATGAATGAGTGTCCAGTAGCCGCAGACGGGATGACGACGAAGACC 42 9669625 0.93079366 9 41 155 0.985074627 1.819543936 0.343283582 0.380952381 0.611940299 42 1 0 66 X:9669569-9669664 7 31 5397 FBgn0261617 2552.683333 20.01666667 30.83666667 0.012144084 1.548709409 1.005296725 1 1 1 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 2L 10008362 10008368 + 2L_10008362_10008368_+ 0.782904155 0.782898561 0.782901358 3.96E-06 CG4747 FBtr0079930|FBtr0303902 10007765|10007765 10008889|10008889 2L + 10008342 10008391 3'utr CG4747 FlyBase G3640.1 ATACTGCATCCGAATAAAATGTACAAAGCATACTTGTGAAAGACAACGCC 10 10008361 0.930338526 4 9 35 0.916666667 0.740362689 0.083333333 0.2 0.333333333 10 0 1 11 2L:10008342-10008391 7 CG4747 FBtr0079930|FBtr0303902 10007765|10007765 10008889|10008889 GTACAAA 7mer-A1 dme-miR-305-5p 2L + 10008331 10008373 3'utr CG4747 FlyBase G2874.1 AAGTGTATAGAATACTGCATCCGAATAAAATGTACAAAGCATA 6 10008358 0.865282217 3 5 18 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2L:10008331-10008373 7 7 1 FBgn0043456 4161.81 159.8633333 245.0833333 0.00168196 0.043787402 0.028561714 1 4 2.5 0.15 dme-miR-184-3p 6mer3-8 TCCGTC 2L 10011984 10011989 + 2L_10011984_10011989_+ 0.999715567 0.999535426 0.999625496 0.000127421 Trp1 FBtr0305986|FBtr0343741 10011911|10011911 10012118|10012118 2L + 10011956 10012010 3'utr Trp1 FlyBase G3649.1 CGAATTTGTATTTATAATTTCTTTTATTTCCGTCGAACTTTTGGTTGTATGTTTT 220 10011983 0.748555056 9 220 2429 1 2.440909082 0.054347826 0.190909091 0.355072464 220 0 0 276 2L:10011956-10012010 6 Trp1 FBtr0305986|FBtr0343741 10011911|10011911 10012118|10012118 TCCGTC 6mer3-8 dme-miR-184-3p 2L + 10011962 10012010 3'utr Trp1 FlyBase G2880.1 TGTATTTATAATTTCTTTTATTTCCGTCGAACTTTTGGTTGTATGTTTT 158 10011983 0.757499048 10 156 1705 0.982300885 2.045322979 0.088495575 0.310126582 0.517699115 158 3 1 222 2L:10011962-10012010 6 188 2 FBgn0011584 1171.806667 85.36666667 131.8133333 0.160436022 2.20226474 1.426259357 1 1 1 0.15 dme-miR-276a-3p 6mer2-7 GTTCCT 2L 10012081 10012086 + 2L_10012081_10012086_+ 0.99999708 0.99997512 0.9999861 1.56E-05 Trp1 FBtr0305986|FBtr0343741 10011911|10011911 10012118|10012118 2L + 10012025 10012102 3'utr Trp1 FlyBase G3650.1 ATATTGAATAGCGCAAAAGACATACATTAACTTTAGCTTTTAATTGTAAATCCTTTGTTCCTTAATAAATATTATTGT 26 10012079 0.993348097 9 26 317 1 1.505149978 0.125 0.230769231 0.375 26 0 0 32 2L:10012025-10012102 6 Trp1 FBtr0305986|FBtr0343741 10011911|10011911 10012118|10012118 GTTCCT 6mer2-7 dme-miR-276a-3p 2L + 10012026 10012098 3'utr Trp1 FlyBase G2881.1 TATTGAATAGCGCAAAAGACATACATTAACTTTAGCTTTTAATTGTAAATCCTTTGTTCCTTAATAAATATTA 21 10012079 0.992228769 8 19 213 0.870967742 1.431363764 0.225806452 0.380952381 0.580645161 21 4 0 27 2L:10012026-10012098 6 17 3 FBgn0011584 1171.806667 85.36666667 131.8133333 0.014507513 0.199140961 0.128970261 2 2 2 0.15 dme-miR-79-3p 6mer3-8 TAGCTT 2L 10059636 10059641 + 2L_10059636_10059641_+ 0.709884881 0.703243129 0.706564005 0.004696462 Pen FBtr0079937 10059466 10060095 2L + 10059517 10059649 3'utr Pen FlyBase G3662.1 TACACCTTCGACCGCGCTCACACACTATGCCATTGTCAAACATACGCATACTCATCATCACATCTTACAAACATTCCCAAACACTTTGGAGGTATGCATGGAAACACAGGCGAATGCATTAGCTTAAAGTCAT 36 10059635 0.754718326 13 34 177 0.977272727 1.633468456 0.227272727 0.194444444 0.340909091 36 1 0 43 2L:10059517-10059649 6 Pen FBtr0079937 10059466 10060095 TAGCTT 6mer3-8 dme-miR-79-3p 2L + 10059558 10059646 3'utr Pen FlyBase G2895.2 ATACGCATACTCATCATCACATCTTACAAACATTCCCAAACACTTTGGAGGTATGCATGGAAACACAGGCGAATGCATTAGCTTAAAGT 20 10059635 0.96243025 7 19 92 0.962962963 1.414973348 0.148148148 0.3 0.481481481 20 1 0 26 2L:10059558-10059646 6 16.5 4 FBgn0267727 3642.156667 171.07 261.8833333 0.004530283 0.096451745 0.063005155 1 1 1 0.15 dme-miR-8-3p 6mer2-7 AGTATT 2L 10059923 10059928 + 2L_10059923_10059928_+ 0.961332957 0.999992741 0.980662849 0.027336536 Pen FBtr0079937 10059466 10060095 2L + 10059771 10060089 3'utr Pen FlyBase G3664.1 CGATGCAACCGCTCGGGCAGCTGCGCTGGCTGGGATCCGTGGATCATAGTATTTCCAGAATCCGTCTGTACAGGGGGCACCTTATGTTTGCGTGTACTAGGCTTTTTATTGGATACGTTTCGAGCTCATTTCGGATATATTTTAGGCTGTTTAGTATTTATTTATGTATACAGGAAACGCTTTTAATCCTCCACCTTCGCGCAAGCATTACAACAACAACAACAACAACAACAACTCATTCCCTTCACACCAGTGTCCTCATTCCCGAATCGCATGTTTATATTCAAAGTTGTCAATAAATAATGAATTGTTTGAATGA 200 10059912 0.991352418 49 185 1976 0.923728814 2.037426498 0.144067797 0.175 0.300847458 200 17 1 218 2L:10059771-10060089 6 Pen FBtr0079937 10059466 10060095 AGTATT 6mer2-7 dme-miR-8-3p 2L + 10059663 10059977 3'utr Pen FlyBase G2896.1 TGGCAAAATCCACTCGCATGAATCCCCATTTAACATACCCGTATTCCTCGCGTTAGACTAGACTTCACAGATTGCAGCATGGATCTTTCTGGCAGTGTTCCTCGTTCACGATGCAACCGCTCGGGCAGCTGCGCTGGCTGGGATCCGTGGATCATAGTATTTCCAGAATCCGTCTGTACAGGGGGCACCTTATGTTTGCGTGTACTAGGCTTTTTATTGGATACGTTTCGAGCTCATTTCGGATATATTTTAGGCTGTTTAGTATTTATTTATGTATACAGGAAACGCTTTTAATCCTCCACCTTCGCGCAAGCA 153 10059912 0.988965294 44 142 1391 0.919491525 1.336459734 0.084745763 0.405228758 0.61440678 153 10 9 217 2L:10059663-10059977 6 64 5 FBgn0267727 3642.156667 171.07 261.8833333 0.017572006 0.374115859 0.244383631 11 11 11 0.15 dme-miR-305-5p 6mer3-8 AGTACA 2L 10114 10119 - 2L_10114_10119_- 0.942012641 0.893699798 0.917856219 0.034162308 l(2)gl FBtr0078168|FBtr0306591|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0306590|FBtr0078170|FBtr0330655|FBtr0078171|FBtr0306592|FBtr0078166 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11214|11214|11214|11214|11309|11214|11214|11214 2L - 10108 10152 3'utr l(2)gl FlyBase G6257.1 TGAGAAGTAAGTTAATGAGCCTTCAAGTACTTTAGTACATAATGT 25 10137 0.747475541 5 23 187 0.961538462 1.096910013 0.269230769 0.04 0.076923077 25 0 1 25 2L:10108-10152 6 l(2)gl FBtr0306592|FBtr0306590|FBtr0078166|FBtr0330655|FBtr0078171|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0078170|FBtr0078168|FBtr0306591 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11309|11214|11214|11214|11214|11214|11214|11214 AGTACA 6mer3-8 dme-miR-305-5p 2L - 10108 10152 3'utr l(2)gl FlyBase G4879.1 TGAGAAGTAAGTTAATGAGCCTTCAAGTACTTTAGTACATAATGT 13 10121 0.637309891 6 13 93 1 1.322219295 0.142857143 0.461538462 0.666666667 13 0 0 21 2L:10108-10152 6 12.5 6 FBgn0002121 6538.69 148.3266667 227.85 0.001911698 0.08427345 0.054860654 18 2 10 0.15 dme-miR-283-5p 7mer-m8 TGATATT 2L 10199632 10199638 - 2L_10199632_10199638_- 0.52599064 0.490441499 0.508216069 0.02513701 Ripalpha FBtr0079962 10199399 10199831 2L - 10199604 10199659 3'utr Ripalpha FlyBase G9501.2 AATTTTTGAAACAGTGATACATGATATTCCCCCCCTAATTAATCTAAATCCAAAGA 79 10199633 0.791341577 7 76 563 0.989361702 1.968482949 0.276595745 0.189873418 0.319148936 79 1 0 93 2L:10199604-10199659 7 Ripalpha FBtr0079962 10199399 10199831 TGATATT 7mer-m8 dme-miR-283-5p 2L - 10199561 10199654 3'utr Ripalpha FlyBase G7373.1 TTGAAACAGTGATACATGATATTCCCCCCCTAATTAATCTAAATCCAAAGAATGATATGAGTTATGGCTAGAAATGAGATCTTTAAGCATATTG 34 10199633 0.905026816 5 33 222 0.97826087 1.653212514 0.304347826 0.205882353 0.413043478 34 1 0 45 2L:10199561-10199654 7 52 7 FBgn0032189 194.0066667 18.85 28.7 0.268032026 2.75862069 1.81184669 -5 -5 -5 0.15 dme-bantam-3p 6mer2-7 GATCTC 2L 102021 102026 + 2L_102021_102026_+ 0.999934478 0.999985971 0.999960225 3.64E-05 Zir FBtr0078103 101917 102086 2L + 101952 102079 3'utr Zir FlyBase G440.1 ATCATACTTTTGGTCTTTCATGTCTAGCGTATCGGATTATTTTAAGTAAATCTTACATTTTAAATTATCGATCTCTATAATTGCTAATGTAATAGCATAACTTTTTTATGCATCTAATAGATTAAGCA 152 102029 0.990765267 18 144 1487 0.952380952 1.954242509 0.259259259 0.171052632 0.333333333 152 8 1 180 2L:101952-102079 6 Zir FBtr0078103 101917 102086 GATCTC 6mer2-7 dme-bantam-3p 2L + 101991 102079 3'utr Zir FlyBase G370.1 TTTTAAGTAAATCTTACATTTTAAATTATCGATCTCTATAATTGCTAATGTAATAGCATAACTTTTTTATGCATCTAATAGATTAAGCA 107 102029 0.974162651 13 97 1051 0.905660377 1.857332496 0.182389937 0.38317757 0.58490566 107 14 1 144 2L:101991-102079 6 122.5 8 FBgn0031216 988 18.33333333 28.1 0.123987854 6.681818182 4.359430605 -8 -8 -8 0.15 dme-miR-34-5p 8mer-A1 CACTGCCA 2L 10202680 10202687 - 2L_10202680_10202687_- 0.678396218 0.678393308 0.678394763 2.05E-06 CG34159 FBtr0112350 10202518 10202882 2L - 10202635 10202704 3'utr CG34159 FlyBase G9506.1 AAAAAACGATTTAAATCCACTGCCAGCTGAAAGGCAAACCATGATTCAATAAAGTGTACATTGGCAAACG 41 10202689 0.9615275 7 39 196 0.957446809 1.653212514 0.319148936 0.146341463 0.255319149 41 2 0 45 2L:10202635-10202704 8 CG34159 FBtr0112350 10202518 10202882 CACTGCCA 8mer-A1 dme-miR-34-5p 2L - 10202613 10202703 3'utr CG34159 FlyBase G7375.1 AAAAACGATTTAAATCCACTGCCAGCTGAAAGGCAAACCATGATTCAATAAAGTGTACATTGGCAAACGATTTTTATCCCTGGCACCCTGA 15 10202689 0.970356615 5 12 69 0.782608696 0.954242509 0.304347826 0.4 0.608695652 15 4 1 18 2L:10202613-10202703 8 25 9 FBgn0085188 482 64.53 98.53333333 0.05186722 0.387416705 0.253721245 2 2 2 0.15 dme-miR-305-3p 6mer3-8 ATGTGC 2L 10202848 10202853 - 2L_10202848_10202853_- 0.810824034 0.999999916 0.905411975 0.133767562 CG34159 FBtr0112350 10202518 10202882 2L - 10202817 10202868 3'utr CG34159 FlyBase G9507.1 ACAGCGGACAACGGCATGTGCTCCATGTGGTAACGATTAATTAAATTATACA 6 10202852 0.970138544 2 5 26 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2L:10202817-10202868 6 CG34159 FBtr0112350 10202518 10202882 ATGTGC 6mer3-8 dme-miR-305-3p 2L - 10202830 10202866 3'utr CG34159 FlyBase G7376.1 AGCGGACAACGGCATGTGCTCCATGTGGTAACGATTA 6 10202843 0.947974797 3 6 28 1 1.041392685 0 0.5 0.727272727 6 0 0 11 2L:10202830-10202866 6 5 10 FBgn0085188 482 64.53 98.53333333 0.010373444 0.077483341 0.050744249 -1 -10 -5.5 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 2L 10204785 10204790 - 2L_10204785_10204790_- 0.999999963 0.999999994 0.999999979 0 CG5734 FBtr0079960 10204755 10205368 2L - 10204764 10204827 3'utr CG5734 FlyBase G9509.1 CTAAACAATGAACTATGAATGTACATTCCCTTATCTGTTGACTCACTTCCAAATAAATGACAAA 21 10204790 0.990806718 8 19 191 0.92 0.884606581 0.04 0.142857143 0.28 21 0 2 23 2L:10204764-10204827 6 CG5734 FBtr0079960 10204755 10205368 TTGACT 6mer3-8 dme-miR-1012-3p 2L - 10204758 10204818 3'utr CG5734 FlyBase G7377.1 GAACTATGAATGTACATTCCCTTATCTGTTGACTCACTTCCAAATAAATGACAAAAATGTT 16 10204790 0.969612823 8 14 138 0.904761905 1.278753601 0.238095238 0.3125 0.476190476 16 2 0 19 2L:10204758-10204818 6 16 11 FBgn0032191 425.53 23.29666667 35.42 0.037600169 0.686793533 0.451722191 0 0 0 0.15 dme-bantam-3p 6mer3-8 TGATCT 2L 10205018 10205023 - 2L_10205018_10205023_- 0.999999996 0.999137885 0.99956894 0.000609597 CG5734 FBtr0079960 10204755 10205368 2L - 10204970 10205034 3'utr CG5734 FlyBase G9510.1 ACTATTGTAAATGATCTGTAAATGGATGCTCGACGGATACTTTTATCTCTTTTATCATTTCTTGT 17 10205023 0.7975538 8 16 164 0.947368421 0.954242509 0 0.117647059 0.210526316 17 0 1 18 2L:10204970-10205034 6 CG5734 FBtr0079960 10204755 10205368 TGATCT 6mer3-8 dme-bantam-3p 2L - 10204979 10205031 3'utr CG5734 FlyBase G7379.1 ATTGTAAATGATCTGTAAATGGATGCTCGACGGATACTTTTATCTCTTTTATC 20 10205012 0.764931139 6 19 144 0.9375 1.477121255 0.125 0.4 0.625 20 2 0 30 2L:10204979-10205031 6 15 12 FBgn0032191 425.53 23.29666667 35.42 0.035250159 0.643868937 0.423489554 0 -11 -5.5 0.15 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 10243 10248 - 2L_10243_10248_- 0.892166221 0.846286797 0.869226509 0.032441635 l(2)gl FBtr0078168|FBtr0306591|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0306590|FBtr0078170|FBtr0330655|FBtr0078171|FBtr0306592|FBtr0078166 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11214|11214|11214|11214|11309|11214|11214|11214 2L - 10221 10293 3'utr l(2)gl FlyBase G6258.1 TATTTAATTCTTTGGCTAATACGTCAGTTAAAAAAGGCTACATTTTGATGATACTCACAAATGTAATTTTTGC 52 10245 0.751064451 6 46 396 0.901639344 1.439332694 0.098360656 0.134615385 0.262295082 52 5 1 55 2L:10221-10293 6 l(2)gl FBtr0306592|FBtr0306590|FBtr0078166|FBtr0330655|FBtr0078171|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0078170|FBtr0078168|FBtr0306591 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11309|11214|11214|11214|11214|11214|11214|11214 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L - 10196 10262 3'utr l(2)gl FlyBase G4880.1 AAAAGGCTACATTTTGATGATACTCACAAATGTAATTTTTGCATTCTACACAGGTGCAATTAAAAAA 23 10245 0.983430263 3 22 169 0.948717949 1.568201724 0.102564103 0.47826087 0.692307692 23 2 0 37 2L:10196-10262 6 35 13 FBgn0002121 6538.69 148.3266667 227.85 0.005352754 0.235965661 0.153609831 -3 -3 -3 0.15 dme-miR-1006-3p 7mer-A1 GAATTTA 2L 10256920 10256926 - 2L_10256920_10256926_- 0.823341178 0.822751466 0.823046322 0.000416981 Pten FBtr0089905|FBtr0089901 10256317|10256317 10257117|10257117 2L - 10256912 10256960 5'utr Pten FlyBase G9592.1 GATCGATTACAGCTGCGCTCTGCACATCTGTTTAGAATTTAATGTACAT 9 10256931 0.977496252 7 9 66 1 1.041392685 0.181818182 0.222222222 0.363636364 9 0 0 11 2L:10256912-10256960 7 Pten FBtr0089905|FBtr0089901 10256317|10256317 10257117|10257117 GAATTTA 7mer-A1 dme-miR-1006-3p 2L - 10256917 10256962 5'utr Pten FlyBase G7439.1 ACGATCGATTACAGCTGCGCTCTGCACATCTGTTTAGAATTTAATG 8 10256931 0.980928934 5 8 59 1 0.903089987 0.125 0 0 8 0 0 8 2L:10256917-10256962 7 4 14 FBgn0026379 759.45 36.16 55.47 0.00526697 0.110619469 0.072111051 5 5 5 0.15 dme-bantam-3p 6mer2-7 GATCTC 2L 10257077 10257082 - 2L_10257077_10257082_- 0.995780304 0.99496997 0.995375137 0.000572969 Pten FBtr0089905|FBtr0089901 10256317|10256317 10257117|10257117 2L - 10257060 10257119 stop_codon Pten FlyBase G9594.1 AATCACCCGAGACGATTTAAAAGACTTCTGGCTGAACGATCTCTTAATTTTGATGTATAA 180 10257075 0.658411447 12 175 1275 0.972972973 2.033423755 0.238738739 0.211111111 0.36036036 180 5 1 216 2L:10257060-10257119 6 Pten FBtr0089905|FBtr0089901 10256317|10256317 10257117|10257117 GATCTC 6mer2-7 dme-bantam-3p 2L - 10257057 10257119 stop_codon Pten FlyBase G7440.2 AATCACCCGAGACGATTTAAAAGACTTCTGGCTGAACGATCTCTTAATTTTGATGTATAAAAC 156 10257075 0.669734764 12 151 1092 0.978070175 2.047274867 0.210526316 0.320512821 0.535087719 156 4 1 223 2L:10257057-10257119 6 129.5 15 FBgn0026379 759.45 36.16 55.47 0.170518138 3.58130531 2.334595277 -7 -7 -7 0.15 dme-miR-33-5p 6mer3-8 CAATGC 2L 10262064 10262069 - 2L_10262064_10262069_- 0.999394833 0.990220295 0.994807564 0.006487351 Rsf1 FBtr0333411 10261793 10262815 2L - 10262056 10262085 3'utr Rsf1 FlyBase G9605.1 ACGGCAAAAATCTAGCCAATGCTGCAAGCA 7 10262066 0.726989354 2 7 20 1 1.041392685 0 0.571428571 0.727272727 7 0 0 11 2L:10262056-10262085 6 Rsf1 FBtr0333411 10261793 10262815 CAATGC 6mer3-8 dme-miR-33-5p 2L - 10262057 10262100 3'utr Rsf1 FlyBase G7452.1 TGTAGTTGGGTCGAAACGGCAAAAATCTAGCCAATGCTGCAAGC 7 10262066 0.91261008 3 6 24 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 2L:10262057-10262100 6 6 16 FBgn0011305 436.02 51.88333333 79.38333333 0.013760837 0.115644073 0.075582616 -3 -3 -3 0.15 "dme-miR-995-3p,dme-miR-998-3p" 6mer2-7 GGTGCT 2L 10311174 10311179 - 2L_10311174_10311179_- 0.998741957 0.611570735 0.805156346 0.273771452 l(2)SH0834 FBtr0080062 10311048 10311329 2L - 10311163 10311221 3'utr l(2)SH0834 FlyBase G9702.1 AAAACAACCACCATTGCGTTTTCAGCACTGGCAGCGACTTTAGGTGCTGTACAGCACTG 14 10311181 0.961338805 5 14 74 1 1.204119983 0 0.071428571 0.1875 14 0 0 16 2L:10311163-10311221 6 l(2)SH0834 FBtr0080062 10311048 10311329 GGTGCT 6mer2-7 "dme-miR-995-3p,dme-miR-998-3p" 2L - 10311172 10311203 3'utr l(2)SH0834 FlyBase G7519.1 TTTTCAGCACTGGCAGCGACTTTAGGTGCTGT 6 10311181 0.858038448 2 6 30 1 1.113943352 0 0.666666667 0.846153846 6 0 0 13 2L:10311172-10311203 6 6.5 17 FBgn0267365 353.5433333 47.94666667 74.01666667 0.018385299 0.135567297 0.087818059 2 2 2 0.15 dme-miR-970-3p 6mer2-7 CTTATG 2L 10317344 10317349 + 2L_10317344_10317349_+ 0.961653228 0.74392342 0.852788324 0.153958218 CG4972 FBtr0079988 10317296 10317569 2L + 10317295 10317367 stop_codon CG4972 FlyBase G3754.1 TAGTAACAAAATGGTATTGAGTATAATATTGCGATTGCGAGTAGGGAAACTTATGTTCAAAATTATTTTTCAA 18 10317346 0.982012978 8 17 123 0.952380952 1.301029996 0 0.111111111 0.238095238 18 1 0 20 2L:10317295-10317367 6 CG4972 FBtr0079988 10317296 10317569 CTTATG 6mer2-7 dme-miR-970-3p 2L + 10317296 10317358 stop_codon CG4972 FlyBase G2969.1 AGTAACAAAATGGTATTGAGTATAATATTGCGATTGCGAGTAGGGAAACTTATGTTCAAAATT 18 10317345 0.981129209 4 16 118 0.769230769 1.301029996 0.115384615 0.333333333 0.538461538 18 6 0 20 2L:10317296-10317358 6 11.5 18 FBgn0032217 922.8633333 53.82666667 82.38666667 0.012461217 0.213648749 0.139585693 -2 -1 -1.5 0.15 dme-miR-92b-3p 7mer-m1 TGCAATT 2L 10338710 10338716 + 2L_10338710_10338716_+ 0.4693011 0.666977924 0.568139512 0.139778606 GATAd FBtr0333098 10338407 10339185 2L + 10338633 10338733 3'utr GATAd FlyBase G3782.1 AAATTGAACCAGTATGTCAAAACTTTTAAATAATATCACACTAAATATAGACCTTAAGAGAGGACATCAATACTTAATGCAATTAAATTAAAAATAAAATT 53 10338705 0.974643649 10 51 344 0.970588235 1.819543936 0.014705882 0.226415094 0.397058824 53 2 0 66 2L:10338633-10338733 7 GATAd FBtr0333098 10338407 10339185 TGCAATT 7mer-m1 dme-miR-92b-3p 2L + 10338676 10338727 3'utr GATAd FlyBase G2993.1 AATATAGACCTTAAGAGAGGACATCAATACTTAATGCAATTAAATTAAAAAT 30 10338706 0.668591608 6 26 203 0.787234043 1.568201724 0 0.333333333 0.574468085 30 10 0 37 2L:10338676-10338727 7 38 19 FBgn0032223 1151.333333 44.42 68.51 0.033005211 0.855470509 0.554663553 5 4 4.5 0.15 dme-miR-8-3p 7mer-m8 CAGTATT 2L 10338765 10338771 + 2L_10338765_10338771_+ 0.661591403 0.661584823 0.661588113 4.67E-06 GATAd FBtr0333098 10338407 10339185 2L + 10338740 10338788 3'utr GATAd FlyBase G3783.1 ATTTATATTTATTAAAACCATTTTACAGTATTTTTAATTTTTTAATAAC 17 10338762 0.770127933 7 15 206 0.952380952 1.301029996 0 0.176470588 0.333333333 17 1 0 20 2L:10338740-10338788 7 GATAd FBtr0333098 10338407 10339185 CAGTATT 7mer-m8 dme-miR-8-3p 2L + 10338740 10338785 3'utr GATAd FlyBase G2994.1 ATTTATATTTATTAAAACCATTTTACAGTATTTTTAATTTTTTAAT 8 10338761 0.96382894 3 6 85 0.818181818 0.954242509 0 0.375 0.545454545 8 2 0 9 2L:10338740-10338785 7 11.5 20 FBgn0032223 1151.333333 44.42 68.51 0.009988419 0.258892391 0.167858707 3 4 3.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 10338915 10338921 + 2L_10338915_10338921_+ 0.753252559 0.752477825 0.752865192 0.000547866 GATAd FBtr0333098|FBtr0333098|FBtr0333098 10338407|10338407|10338407 10339185|10339185|10339185 2L + 10338870 10338942 3'utr GATAd FlyBase G3784.1 CTAAAAAATAATAATGTTTTAAATCTCTTGCCTATACGAAAATCATGTGATAATATAATAATCTCCACAAAAC 49 10338912 0.909228285 10 46 316 0.954545455 1.799340549 0 0.265306122 0.454545455 49 3 0 63 2L:10338870-10338942 7 GATAd FBtr0333098|FBtr0333098|FBtr0333098 10338407|10338407|10338407 10339185|10339185|10339185 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 10338819 10338939 3'utr GATAd FlyBase G2995.1 AGTTTTAACAATGATTTTTCAGCTGTCTTTGCAATTGAACAACTTCTAAAGCTAAAAAATAATAATGTTTTAAATCTCTTGCCTATACGAAAATCATGTGATAATATAATAATCTCCACAA 40 10338912 0.980032957 11 37 264 0.965517241 1.748188027 0 0.325 0.534482759 40 2 0 56 2L:10338819-10338939 7 37.5 21 FBgn0032223 1151.333333 44.42 68.51 0.032570932 0.844214318 0.547365348 3 3 3 0.15 dme-miR-980-5p 7mer-m1 AAAAACT 2L 10339034 10339040 + 2L_10339034_10339040_+ 0.71265585 0.692866101 0.702760975 0.013993431 GATAd FBtr0333098 10338407 10339185 2L + 10339025 10339066 3'utr GATAd FlyBase G3786.1 AAGAAACTAAAAAACTTAATGCTGTTTTCGAATCTACATAAA 69 10339050 0.581312782 5 68 529 0.987654321 1.903089987 0.209876543 0.144927536 0.271604938 69 1 0 80 2L:10339025-10339066 7 GATAd FBtr0333098 10338407 10339185 AAAAACT 7mer-m1 dme-miR-980-5p 2L + 10339023 10339070 3'utr GATAd FlyBase G2997.1 ATAAGAAACTAAAAAACTTAATGCTGTTTTCGAATCTACATAAATTGT 53 10339051 0.584910985 4 53 410 1 1.84509804 0.171428571 0.226415094 0.414285714 53 0 0 70 2L:10339023-10339070 7 60 22 FBgn0032223 1151.333333 44.42 68.51 0.052113492 1.350742909 0.875784557 -16 -17 -16.5 0.15 dme-miR-968-5p 6mer3-8 ACTACT 2L 10363887 10363892 + 2L_10363887_10363892_+ 0.977767275 0.724989075 0.851378175 0.178741179 pim FBtr0332190|FBtr0080001 10363823|10363823 10364092|10364046 2L + 10363866 10363904 3'utr pim FlyBase G3806.1 TTTTTAGCTAGGTATCTTTGTACTACTAATTAATTATTT 28 10363884 0.718579863 6 28 292 1 1.591064607 0 0.285714286 0.487179487 28 0 0 39 2L:10363866-10363904 6 pim FBtr0332190|FBtr0080001 10363823|10363823 10364092|10364046 ACTACT 6mer3-8 dme-miR-968-5p 2L + 10363868 10363898 3'utr pim FlyBase G3010.1 TTTAGCTAGGTATCTTTGTACTACTAATTAA 20 10363884 0.719897473 2 18 197 0.931034483 1.130333768 0 0.35 0.551724138 20 1 1 27 2L:10363868-10363898 6 23.5 23 FBgn0003087 219.3333333 28.13666667 42.80666667 0.107142857 0.835209098 0.54897991 3 3 3 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 10364060 10364065 + 2L_10364060_10364065_+ 0.788455602 0.969848278 0.87915194 0.128264008 pim FBtr0332190 10363823 10364092 2L + 10364038 10364103 3'utr pim FlyBase G3808.1 CAGGCAATTATATGTGTACGATGTACCTCGTTTGGAAGTGATTTTGAATTAAAGCAACTATAAAAA 170 10364080 0.682176502 10 166 1475 0.98206278 2.039414119 0.452914798 0.229411765 0.412556054 170 3 1 219 2L:10364038-10364103 6 pim FBtr0332190 10363823 10364092 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 10364046 10364096 3'utr pim FlyBase G3011.1 TATATGTGTACGATGTACCTCGTTTGGAAGTGATTTTGAATTAAAGCAACT 135 10364080 0.65506144 9 133 1183 0.990147783 2.303196057 0.428571429 0.37037037 0.581280788 135 2 0 201 2L:10364046-10364096 6 116.5 24 FBgn0003087 219.3333333 28.13666667 42.80666667 0.531155015 4.14050468 2.721538701 -20 -20 -20 0.15 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2L 10392262 10392267 + 2L_10392262_10392267_+ 0.978792792 0.997495437 0.988144114 0.013224735 da FBtr0332195|FBtr0332196|FBtr0080008 10392193|10392193|10392193 10393228|10392728|10392787 2L + 10392218 10392278 3'utr da FlyBase G3839.1 CTGGAAATCGTCGTCGTCCCTCTCTTCCATAAAAACCGAATGTATTGAAGGCTCCGCGGCC 11 10392258 0.854687359 7 9 56 0.933333333 1.146128036 0.066666667 0.181818182 0.4 11 1 0 14 2L:10392218-10392278 6 da FBtr0080008|FBtr0332195|FBtr0332196 10392193|10392193|10392193 10392787|10393228|10392728 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2L + 10392226 10392282 3'utr da FlyBase G3035.1 CGTCGTCGTCCCTCTCTTCCATAAAAACCGAATGTATTGAAGGCTCCGCGGCCAAGT 6 10392263 0.950861397 5 6 27 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2L:10392226-10392282 6 4 25 FBgn0000413 2154.396667 82.52666667 127.39 0.001856668 0.048469182 0.031399639 4 -1 1.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2L 10402800 10402805 + 2L_10402800_10402805_+ 0.999999996 1 0.999999998 0 Cnot4 FBtr0331638|FBtr0304112 10402769|10402769 10403206|10403206 2L + 10402746 10402832 stop_codon Cnot4 FlyBase G3859.1 TTTAAAAAGCCGTCAATTCGTTTAGCTACAATACATATAAATAATACATTTGTTTACCTGTACTCTTTATTAAATATTTCTTAAAGT 25 10402806 0.974140162 8 24 271 1 1.531478917 0 0.32 0.5 25 0 0 34 2L:10402746-10402832 6 Cnot4 FBtr0331638|FBtr0080014|FBtr0304112|FBtr0080013|FBtr0304113|FBtr0080010|FBtr0080012|FBtr0331639|FBtr0331637|FBtr0080009|FBtr0080011 10402769|10402769|10402769|10402769|10402769|10402769|10402769|10402769|10402769|10402769|10402769 10403206|10402882|10403206|10402882|10402882|10402882|10402882|10402882|10402882|10402882|10402882 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2L + 10402788 10402812 3'utr Cnot4 FlyBase G3051.1 AATACATTTGTTTACCTGTACTCTT 6 10402798 0.648814865 3 6 57 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2L:10402788-10402812 6 13.5 26 FBgn0051716 2626.393333 88.17666667 135.32 0.005140129 0.153101728 0.099763523 -6 2 -2 0.15 dme-miR-14-3p 6mer2-7 AGACTG 2L 10403152 10403157 + 2L_10403152_10403157_+ 0.664951176 0.999963003 0.832457089 0.236889116 Cnot4 FBtr0331638|FBtr0304112 10402769|10402769 10403206|10403206 2L + 10403120 10403161 3'utr Cnot4 FlyBase G3861.1 AGCAAAGAAAACCTCGTGATGTGAAATTATCGAGACTGTGTA 8 10403141 0.952754272 5 8 37 1 1.041392685 0.181818182 0.375 0.545454545 8 0 0 11 2L:10403120-10403161 6 Cnot4 FBtr0331638|FBtr0304112 10402769|10402769 10403206|10403206 AGACTG 6mer2-7 dme-miR-14-3p 2L + 10403126 10403171 3'utr Cnot4 FlyBase G3052.1 GAAAACCTCGTGATGTGAAATTATCGAGACTGTGTAAAAATGTCAA 9 10403147 0.97316529 6 9 55 1 1.079181246 0.083333333 0.222222222 0.416666667 9 0 0 12 2L:10403126-10403171 6 6 27 FBgn0051716 2626.393333 88.17666667 135.32 0.002284502 0.068045212 0.044339344 11 5 8 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 2L 104098 104104 - 2L_104098_104104_- 0.521223794 0.521223854 0.521223824 7.07E-08 Nhe1 FBtr0301452 103960 104472 2L - 104079 104166 3'utr Nhe1 FlyBase G6295.1 AAAGCACACTACGTCAGTAATTTTAGTTAAAAATATTTATTCATACGAATATATGCTGTATTTGTGATTTTATACATTTTTGAAACCA 191 104105 0.992929741 16 182 2151 0.960869565 1.742332282 0.126086957 0.183246073 0.32173913 191 6 3 221 2L:104079-104166 7 Nhe1 FBtr0301452 103960 104472 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 104081 104130 3'utr Nhe1 FlyBase G4915.1 TTATTCATACGAATATATGCTGTATTTGTGATTTTATACATTTTTGAAAC 131 104105 0.595449411 9 123 1487 0.945355191 1.635986112 0.202185792 0.34351145 0.530054645 131 7 3 173 2L:104081-104130 7 155 28 FBgn0026787 273.9133333 13.01 19.93 0.565872417 11.91391238 7.777220271 1 1 1 0.15 dme-miR-7-5p 6mer3-8 GTCTTC 2L 104190 104195 - 2L_104190_104195_- 0.985757252 0.984396319 0.985076785 0.000962372 Nhe1 FBtr0301452 103960 104472 2L - 104169 104258 3'utr Nhe1 FlyBase G6296.1 TCGTATCACTGTAGCTCCTTTATTAATCCGCTTAAAGCAGTATTACATTGCACACGACAGATGGTCTTCAAAATGAAAATTTGGACGTCA 12 104197 0.985675634 8 11 81 0.875 1.146128036 0 0.333333333 0.5 12 2 0 14 2L:104169-104258 6 Nhe1 FBtr0301452 103960 104472 GTCTTC 6mer3-8 dme-miR-7-5p 2L - 104168 104258 3'utr Nhe1 FlyBase G4916.1 TCGTATCACTGTAGCTCCTTTATTAATCCGCTTAAAGCAGTATTACATTGCACACGACAGATGGTCTTCAAAATGAAAATTTGGACGTCAC 19 104197 0.971953748 7 17 132 0.961538462 1.397940009 0.230769231 0.368421053 0.538461538 19 1 0 25 2L:104168-104258 6 7 29 FBgn0026787 273.9133333 13.01 19.93 0.025555529 0.538047656 0.351229303 2 2 2 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2L 10420744 10420750 - 2L_10420744_10420750_- 0.655718044 0.650757319 0.653237681 0.003507745 pie FBtr0080046|FBtr0333490 10420709|10420623 10420827|10420827 2L - 10420726 10420774 3'utr pie FlyBase G9792.1 GTGGGAATTAATTCGTCATAGAATTCTAGTCTCTTTATGCATATATTGT 81 10420751 0.823378966 6 80 765 1 1.991226076 0.112244898 0.185185185 0.326530612 81 0 0 98 2L:10420726-10420774 7 pie FBtr0080046|FBtr0333490 10420709|10420623 10420827|10420827 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2L - 10420739 10420774 3'utr pie FlyBase G7582.1 GTGGGAATTAATTCGTCATAGAATTCTAGTCTCTTT 66 10420751 0.820491423 3 63 577 0.965909091 1.929418926 0.170454545 0.257575758 0.443181818 66 3 0 85 2L:10420739-10420774 7 72 30 FBgn0005683 197.3333333 11.90333333 18.10333333 0.364864865 6.048725847 3.977168109 1 1 1 0.15 dme-miR-317-5p 6mer3-8 GTATCC 2L 10428292 10428297 + 2L_10428292_10428297_+ 0.975889175 0.980777446 0.978333311 0.003456479 KdelR FBtr0080023 10427808 10428632 2L + 10428271 10428373 3'utr KdelR FlyBase G3892.1 TAAATAGCTCTTAAGTCGACTGTATCCTAAAAATCCGAGTAAAGTTAAGTCTTATTGTGTGGCTAATAGTAAAGTAAATGATGAGCGATGTCAACATATAATA 36 10428293 0.738596182 13 34 268 0.930232558 1.602059991 0.093023256 0.166666667 0.302325581 36 3 0 40 2L:10428271-10428373 6 KdelR FBtr0080023 10427808 10428632 GTATCC 6mer3-8 dme-miR-317-5p 2L + 10428260 10428350 3'utr KdelR FlyBase G3080.1 AAGTTATGCATTAAATAGCTCTTAAGTCGACTGTATCCTAAAAATCCGAGTAAAGTTAAGTCTTATTGTGTGGCTAATAGTAAAGTAAATG 24 10428293 0.982830603 8 22 170 0.96969697 1.204119983 0.090909091 0.291666667 0.484848485 24 0 1 32 2L:10428260-10428350 6 18 31 FBgn0267330 1541.713333 135.1766667 206.4166667 0.011675322 0.133159076 0.087202261 -1 -1 -1 0.15 dme-miR-283-5p 7mer-A1 GATATTA 2L 10428606 10428612 + 2L_10428606_10428612_+ 0.746070177 0.745971197 0.746020687 7.00E-05 KdelR FBtr0080023 10427808 10428632 2L + 10428585 10428622 3'utr KdelR FlyBase G3894.1 AATATTTTAAACACTTTTGCAGATATTATATTATAAAC 14 10428601 0.755408105 4 13 142 0.944444444 1.230448921 0 0.214285714 0.388888889 14 1 0 17 2L:10428585-10428622 7 KdelR FBtr0080023 10427808 10428632 GATATTA 7mer-A1 dme-miR-283-5p 2L + 10428585 10428628 3'utr KdelR FlyBase G3083.1 AATATTTTAAACACTTTTGCAGATATTATATTATAAACAAAGTA 13 10428601 0.768237436 4 13 135 1 1.113943352 0 0 0 13 0 0 13 2L:10428585-10428628 7 13.5 32 FBgn0267330 1541.713333 135.1766667 206.4166667 0.008756492 0.099869307 0.065401696 5 5 5 0.15 dme-miR-307a-3p 6mer3-8 GGTTGT 2L 104322 104327 - 2L_104322_104327_- 0.98792842 0.976615587 0.982272004 0.007999358 Nhe1 FBtr0301452 103960 104472 2L - 104304 104382 3'utr Nhe1 FlyBase G6297.1 GCTTAAGTTCCTCTAGTTAATATTTTTAGAGTTTTTATTTATATAGCGCGGTGATGGTTGTTATCTTGTGTATATTTTT 70 104328 0.797996234 12 69 647 0.988372093 1.929418926 0.127906977 0.185714286 0.337209302 70 1 0 85 2L:104304-104382 6 Nhe1 FBtr0301452 103960 104472 GGTTGT 6mer3-8 dme-miR-307a-3p 2L - 104306 104353 3'utr Nhe1 FlyBase G4917.1 AGTTTTTATTTATATAGCGCGGTGATGGTTGTTATCTTGTGTATATTT 56 104328 0.792436769 6 53 482 0.952380952 1.903089987 0.047619048 0.303571429 0.535714286 56 4 0 80 2L:104306-104353 6 60.5 33 FBgn0026787 273.9133333 13.01 19.93 0.220872782 4.650269024 3.035624686 1 1 1 0.15 dme-miR-184-3p 6mer3-8 TCCGTC 2L 1050415 1050420 - 2L_1050415_1050420_- 0.931318942 0.933695009 0.932506976 0.001680156 S FBtr0077993 1049672 1052037 2L - 1050339 1050438 3'utr S FlyBase G6716.1 TCAGTTACCACACTCGAATCCGTCACAAGAAGAACTATAGAATCGCGACTAAATCACAAACATCACCTTAGTCTAAGTACAGTGCTAATGTCTGTTTTTT 14 1050420 0.957748288 5 11 56 0.894736842 1.230448921 0 0.285714286 0.473684211 14 2 0 17 2L:1050339-1050438 6 S FBtr0077993 1049672 1052037 TCCGTC 6mer3-8 dme-miR-184-3p 2L - 1050360 1050444 3'utr S FlyBase G5252.1 AGTTACTCAGTTACCACACTCGAATCCGTCACAAGAAGAACTATAGAATCGCGACTAAATCACAAACATCACCTTAGTCTAAGTA 10 1050420 0.940524828 5 10 39 1 1.176091259 0.133333333 0.4 0.6 10 0 0 15 2L:1050360-1050444 6 6.5 34 FBgn0003310 666.94 15.53666667 23.95 0.009746004 0.418365158 0.271398747 0 0 0 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 10507952 10507959 - 2L_10507952_10507959_- 0.647654512 0.640831461 0.644242987 0.00482459 CG7384 FBtr0080135|FBtr0080135|FBtr0080135 10507857|10507857|10507857 10508086|10508086|10508086 2L - 10507919 10507969 3'utr CG7384 FlyBase G9821.1 CGTACAGAATCTGTGATAGTGCTAACCTGCAATGGCGTCCATAGCATAGTT 8 10507960 0.973488317 3 8 48 1 1.079181246 0.083333333 0.25 0.5 8 0 0 12 2L:10507919-10507969 8 CG7384 FBtr0080135|FBtr0080135|FBtr0080135 10507857|10507857|10507857 10508086|10508086|10508086 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 10507919 10507969 3'utr CG7384 FlyBase G7601.1 CGTACAGAATCTGTGATAGTGCTAACCTGCAATGGCGTCCATAGCATAGTT 6 10507937 0.869989424 2 4 38 0.666666667 0.77815125 0.333333333 0.5 0.666666667 6 3 0 6 2L:10507919-10507969 8 5.5 35 FBgn0032262 8.333333333 0.46 0.726666667 0.66 11.95652174 7.568807339 1 -22 -10.5 0.15 dme-miR-12-5p 7mer-A1 ATACTCA 2L 1051106 1051112 - 2L_1051106_1051112_- 0.823342073 0.823349562 0.823345817 5.30E-06 S FBtr0077993 1049672 1052037 2L - 1051094 1051137 3'utr S FlyBase G6717.1 GCAAAATCTGCTTTCAACTCATCTCATACTCATAGTTACAACAT 16 1051111 0.743541404 5 15 139 0.941176471 1.204119983 0.235294118 0.0625 0.117647059 16 1 0 16 2L:1051094-1051137 7 S FBtr0077993 1049672 1052037 ATACTCA 7mer-A1 dme-miR-12-5p 2L - 1051099 1051138 3'utr S FlyBase G5253.1 TGCAAAATCTGCTTTCAACTCATCTCATACTCATAGTTAC 8 1051118 0.68791422 4 8 74 1 1.204119983 0 0.625 0.8125 8 0 0 16 2L:1051099-1051138 7 12 36 FBgn0003310 666.94 15.53666667 23.95 0.017992623 0.772366445 0.501043841 -1 6 2.5 0.15 dme-miR-33-5p 8mer-m1 CAATGCAC 2L 10511504 10511511 - 2L_10511504_10511511_- 0.662434709 0.407988136 0.535211422 0.179920916 Fatp FBtr0337007|FBtr0080134|FBtr0080133|FBtr0337006 10511251|10510670|10511251|10511251 10511666|10511666|10511666|10511666 2L - 10511486 10511560 3'utr Fatp FlyBase G9823.1 AGATCATTCAGCCTAGGAGAGATGCATCCGAAGCACATTTCCATGTCAACAATGCACTTTTGTATATCGTAAGCA 16 10511504 0.764814363 9 16 102 1 1.230448921 0 0.0625 0.117647059 16 0 0 17 2L:10511486-10511560 8 Fatp FBtr0337007|FBtr0080134|FBtr0080133|FBtr0337006 10511251|10510670|10511251|10511251 10511666|10511666|10511666|10511666 CAATGCAC 8mer-m1 dme-miR-33-5p 2L - 10511485 10511555 3'utr Fatp FlyBase G7603.1 ATTCAGCCTAGGAGAGATGCATCCGAAGCACATTTCCATGTCAACAATGCACTTTTGTATATCGTAAGCAT 8 10511502 0.978195974 7 8 51 1 1.079181246 0.25 0.25 0.5 8 0 0 12 2L:10511485-10511555 8 8 37 FBgn0021953 551.6433333 26.14666667 40.02666667 0.014502124 0.305966344 0.199866755 -7 -9 -8 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 10534 10540 - 2L_10534_10540_- 0.801936911 0.8019445 0.801940705 5.37E-06 l(2)gl FBtr0078168|FBtr0078168|FBtr0078168|FBtr0306591|FBtr0306591|FBtr0306591|FBtr0078169|FBtr0078169|FBtr0078169|FBtr0078167|FBtr0078167|FBtr0078167|FBtr0306589|FBtr0306589|FBtr0306589|FBtr0306590|FBtr0306590|FBtr0306590|FBtr0078170|FBtr0078170|FBtr0078170|FBtr0330655|FBtr0330655|FBtr0330655|FBtr0078171|FBtr0078171|FBtr0078171|FBtr0306592|FBtr0306592|FBtr0306592|FBtr0078166|FBtr0078166|FBtr0078166 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11309|11309|11309|11214|11214|11214|11214|11214|11214|11214|11214|11214 2L - 10484 10562 3'utr l(2)gl FlyBase G6260.1 CTTTTATTTTCGGTTAAAATATTGTGATACAAAAAAATGCCCTTACAAAATTAGGACAACAACAATTTGCTTTATTATG 220 10541 0.852784174 12 203 1415 0.926199262 1.195553739 0.520295203 0.195454545 0.346863469 220 5 15 251 2L:10484-10562 7 l(2)gl FBtr0306592|FBtr0306592|FBtr0306592|FBtr0306590|FBtr0306590|FBtr0306590|FBtr0078166|FBtr0078166|FBtr0078166|FBtr0330655|FBtr0330655|FBtr0330655|FBtr0078171|FBtr0078171|FBtr0078171|FBtr0078169|FBtr0078169|FBtr0078169|FBtr0078167|FBtr0078167|FBtr0078167|FBtr0306589|FBtr0306589|FBtr0306589|FBtr0078170|FBtr0078170|FBtr0078170|FBtr0078168|FBtr0078168|FBtr0078168|FBtr0306591|FBtr0306591|FBtr0306591 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11214|11214|11214|11214|11214|11214|11309|11309|11309|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 10513 10561 3'utr l(2)gl FlyBase G4883.1 TTTTATTTTCGGTTAAAATATTGTGATACAAAAAAATGCCCTTACAAAA 112 10541 0.695107335 6 103 724 0.909090909 1.273001272 0.557575758 0.357142857 0.563636364 112 8 7 150 2L:10513-10561 7 154 38 FBgn0002121 6538.69 148.3266667 227.85 0.023552118 1.03824891 0.675883257 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 10686409 10686414 - 2L_10686409_10686414_- 0.972862084 0.998996404 0.985929244 0.018479741 CG7296 FBtr0336850|FBtr0336850|FBtr0336850|FBtr0080129|FBtr0080129|FBtr0080129 10686122|10686122|10686122|10686389|10686389|10686389 10686461|10686461|10686461|10686461|10686461|10686461 2L - 10686390 10686438 3'utr CG7296 FlyBase G9830.1 TTGGAGTTAAGCGATAAGAAATGACTGTGAATAAAACCTAAATAAATTA 71 10686417 0.875728737 5 71 317 1 1.886490725 0.272727273 0.056338028 0.12987013 71 0 0 77 2L:10686390-10686438 6 CG7296 FBtr0336850|FBtr0336850|FBtr0336850|FBtr0080129|FBtr0080129|FBtr0080129 10686122|10686122|10686122|10686389|10686389|10686389 10686461|10686461|10686461|10686461|10686461|10686461 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 10686395 10686438 3'utr CG7296 FlyBase G7608.1 TTGGAGTTAAGCGATAAGAAATGACTGTGAATAAAACCTAAATA 41 10686417 0.836218124 4 40 176 0.981481481 1.72427587 0.185185185 0.243902439 0.425925926 41 1 0 53 2L:10686395-10686438 6 56 39 FBgn0032283 0 0 0 Inf Inf Inf 3 3 3 0.15 dme-miR-1003-3p 6mer2-7 TGTGAG 2L 10740454 10740459 + 2L_10740454_10740459_+ 0.998370397 0.997537338 0.997953868 0.000589091 CG12299 FBtr0080113 10740097 10740762 2L + 10740437 10740471 3'utr CG12299 FlyBase G3948.1 AAGATCAAAAGCGATTTTGTGAGCATTCCCAGTAC 9 10740453 0.674570334 2 9 62 1 1 0.1 0.111111111 0.2 9 0 0 10 2L:10740437-10740471 6 CG12299 FBtr0080113 10740097 10740762 TGTGAG 6mer2-7 dme-miR-1003-3p 2L + 10740431 10740469 3'utr CG12299 FlyBase G3121.1 AATCATAAGATCAAAAGCGATTTTGTGAGCATTCCCAGT 7 10740452 0.904794193 3 6 46 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 2L:10740431-10740469 6 8 40 FBgn0032295 396.6833333 14.49 22.2 0.02016722 0.5521049 0.36036036 1 2 1.5 0.15 dme-miR-190-5p 7mer-A1 CATATCA 2L 10740523 10740529 + 2L_10740523_10740529_+ 0.782820202 0.469752714 0.626286458 0.221372152 CG12299 FBtr0080113 10740097 10740762 2L + 10740472 10740587 3'utr CG12299 FlyBase G3949.1 AACTTGTGGCACATTTTGGGCAACCGAAAGCGAAATTCCAGTTTTGTATCTCATATCACACGAAGCCCACACGACTAAAGAAGATTGTCCAGGAAATGGACGTATTGTATTTGCAT 9 10740515 0.98653024 7 9 73 1 0.954242509 0.111111111 0 0 9 0 0 9 2L:10740472-10740587 7 CG12299 FBtr0080113 10740097 10740762 CATATCA 7mer-A1 dme-miR-190-5p 2L + 10740503 10740585 3'utr CG12299 FlyBase G3122.1 GAAATTCCAGTTTTGTATCTCATATCACACGAAGCCCACACGACTAAAGAAGATTGTCCAGGAAATGGACGTATTGTATTTGC 10 10740515 0.857128547 6 10 66 1 1.079181246 0.25 0.2 0.333333333 10 0 0 12 2L:10740503-10740585 7 4 41 FBgn0032295 396.6833333 14.49 22.2 0.01008361 0.27605245 0.18018018 8 8 8 0.15 dme-miR-33-5p 7mer-A1 AATGCAA 2L 1082999 1083005 + 2L_1082999_1083005_+ 0.674812569 0.654753988 0.664783278 0.014183572 Atg4a FBtr0332569|FBtr0077953 1082870|1082870 1085380|1083378 2L + 1082920 1083064 3'utr Atg4a FlyBase G955.1 AGCCCAGCCAGGCGAAAGTGGAGCACCCAATGAGGAGAAAGAGAGTGGGCCGGGAGGTCGAGCCCCTGCGGATGCTGCGAATGCAATAAACTAAGGCTAAAGTGCATAATTAGACGAGTGGTTGAGATTTAGATTTTAGTATGTT 70 1083011 0.962291889 14 68 345 0.975609756 1.602059991 0.268292683 0.157142857 0.280487805 70 1 1 80 2L:1082920-1083064 7 Atg4a FBtr0077953|FBtr0332569 1082870|1082870 1083378|1085380 AATGCAA 7mer-A1 dme-miR-33-5p 2L + 1082923 1083062 3'utr Atg4a FlyBase G769.1 CCAGCCAGGCGAAAGTGGAGCACCCAATGAGGAGAAAGAGAGTGGGCCGGGAGGTCGAGCCCCTGCGGATGCTGCGAATGCAATAAACTAAGGCTAAAGTGCATAATTAGACGAGTGGTTGAGATTTAGATTTTAGTATG 37 1083011 0.962104287 12 34 165 0.945454545 1.414973348 0.418181818 0.351351351 0.563636364 37 2 1 52 2L:1082923-1083062 7 34.5 42 FBgn0031298 484.5333333 26.74 40.88333333 0.071202532 1.290201945 0.843864656 -12 -12 -12 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 2L 10837965 10837971 - 2L_10837965_10837971_- 0.449576015 0.454972318 0.452274166 0.00381576 CG6700 FBtr0301710|FBtr0080187 10837858|10837730 10839315|10839315 2L - 10837942 10837983 3'utr CG6700 FlyBase G9857.1 TATTAGAGGGAGTGTGATTAGAATCCTAACTATTATATTAAA 35 10837965 0.769002304 4 32 261 0.928571429 1.290034611 0.142857143 0.2 0.333333333 35 2 1 39 2L:10837942-10837983 7 CG6700 FBtr0301710|FBtr0080187 10837858|10837730 10839315|10839315 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 10837945 10837989 3'utr CG6700 FlyBase G7624.1 TATTTTTATTAGAGGGAGTGTGATTAGAATCCTAACTATTATATT 34 10837965 0.724236145 5 33 229 0.980769231 1.707570176 0.115384615 0.411764706 0.615384615 34 1 0 51 2L:10837945-10837989 7 34 43 FBgn0032305 1004.78 26.73333333 40.84666667 0.033838253 1.271820449 0.832381263 -6 -6 -6 0.15 dme-miR-7-5p 7mer-m8 GTCTTCC 2L 10838165 10838171 - 2L_10838165_10838171_- 0.705899284 0.70594606 0.705922672 3.31E-05 CG6700 FBtr0301710|FBtr0080187 10837858|10837730 10839315|10839315 2L - 10838145 10838225 3'utr CG6700 FlyBase G9859.1 CAAAATTATCGGAAGTTCAAACTCAACGTTTTGGAGTATGGCAAATTCAACCTGGTCTTCCCCGTCGCCACTAAACATCCG 14 10838168 0.695837135 6 13 83 0.875 1.146128036 0.0625 0.142857143 0.25 14 2 0 14 2L:10838145-10838225 7 CG6700 FBtr0301710|FBtr0080187 10837858|10837730 10839315|10839315 GTCTTCC 7mer-m8 dme-miR-7-5p 2L - 10838148 10838198 3'utr CG6700 FlyBase G7625.1 GTTTTGGAGTATGGCAAATTCAACCTGGTCTTCCCCGTCGCCACTAAACAT 8 10838168 0.977616939 2 8 61 1 1.041392685 0.090909091 0.25 0.454545455 8 0 0 11 2L:10838148-10838198 7 9 44 FBgn0032305 1004.78 26.73333333 40.84666667 0.008957185 0.336658354 0.220336217 -3 -3 -3 0.15 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 2L 10839257 10839264 - 2L_10839257_10839264_- 0.674981398 0.674981104 0.674981251 2.12E-07 CG6700 FBtr0301710|FBtr0080187 10837858|10837730 10839315|10839315 2L - 10839045 10839288 3'utr CG6700 FlyBase G9865.1 TGGCATGAAGCCCTATTCGATTTTGTACCTGATTTCCGAGCTTTTCGGATGTTAGTGTCCTTTTTCGGACTGCGGATGCAACTCTCTTGGCCCTGTTTAAAAATTTGTGTATATATTTCTCTAGATCGCGATTCCCTTTCGTTACAAAGTTAGGACTTGAATTACTCCCATTCTTAGGCTGAAGTCTTCGCTTATTTAGGACCAACTGTTCTTCGTAGGGTTTAAAGTTTTTAGATGGAAAATA 304 10839265 0.988364088 32 297 2794 0.980874317 2.254064453 0.163934426 0.174342105 0.31420765 304 6 1 359 2L:10839045-10839288 8 CG6700 FBtr0301710|FBtr0080187 10837858|10837730 10839315|10839315 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2L - 10839237 10839283 3'utr CG6700 FlyBase G7631.1 TGAAGCCCTATTCGATTTTGTACCTGATTTCCGAGCTTTTCGGATGT 116 10839265 0.699534517 11 113 1170 0.971428571 2.230448921 0.177142857 0.379310345 0.588571429 116 5 0 170 2L:10839237-10839283 8 137.5 45 FBgn0032305 1004.78 26.73333333 40.84666667 0.136845877 5.143391521 3.366247756 1 1 1 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA 2L 10847252 10847259 - 2L_10847252_10847259_- 0.617339781 0.619506356 0.618423069 0.001532018 porin FBtr0080183|FBtr0305260 10847225|10847225 10847867|10847867 2L - 10847237 10847272 3'utr porin FlyBase G9878.1 TACCTTTTCGTTGTGCATTTACCTGAGAAATAAATC 26 10847255 0.730343129 3 26 191 1 1.602059991 0.275 0.346153846 0.575 26 0 0 40 2L:10847237-10847272 8 porin FBtr0305260|FBtr0080183 10847225|10847225 10847867|10847867 TGCATTTA 8mer-A1 dme-miR-277-3p 2L - 10847242 10847278 3'utr porin FlyBase G7636.1 AATCTTTACCTTTTCGTTGTGCATTTACCTGAGAAAT 17 10847255 0.742718784 3 17 139 1 1.361727836 0.347826087 0.352941176 0.52173913 17 0 0 23 2L:10847242-10847278 8 21.5 46 FBgn0004363 5030.653333 426.6133333 653.96 0.004273799 0.050396925 0.032876629 -4 -4 -4 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2L 10854658 10854663 - 2L_10854658_10854663_- 0.852109579 0.878837869 0.865473724 0.018899762 Dnz1 FBtr0080181 10854433 10855186 2L - 10854620 10854746 3'utr Dnz1 FlyBase G9890.1 AATACTACATAGCAATATGTACCGAGCTAGAAACTAAGTCCTTATCAAAAGCATTTACGATATACCCGAAGAATGACGCATATACCAAAAAGGAAATAAAACGGAGATTAAACACTCAAATAGAAAA 31 10854664 0.952298384 10 30 99 0.974358974 1.579783597 0.230769231 0.225806452 0.384615385 31 1 0 38 2L:10854620-10854746 6 Dnz1 FBtr0080181 10854433 10855186 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 10854634 10854679 3'utr Dnz1 FlyBase G7644.1 GAAGAATGACGCATATACCAAAAAGGAAATAAAACGGAGATTAAAC 9 10854664 0.872682275 3 9 18 1 1.041392685 0.272727273 0.111111111 0.272727273 9 0 0 11 2L:10854634-10854679 6 13 47 FBgn0027453 422.0233333 26.38 40.35333333 0.030803984 0.492797574 0.322154304 1 1 1 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 2L 10855091 10855097 - 2L_10855091_10855097_- 0.437351934 0.516896137 0.477124035 0.056246243 Dnz1 FBtr0080181 10854433 10855186 2L - 10855047 10855165 3'utr Dnz1 FlyBase G9892.1 TTTTGTCCTTGCGTTTGCTGTGCGGCTAAAAGAGCCCCCGAGTGTTTTTAGTTTTTAATCAATGTGTGTGTGATTATTTTTAAACGACCTATCCCCCTGCCCGCAGCCAGTCAAATTGA 26 10855100 0.988266237 12 25 231 0.965517241 1.447158031 0.103448276 0.076923077 0.172413793 26 1 0 28 2L:10855047-10855165 7 Dnz1 FBtr0080181 10854433 10855186 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 10855060 10855120 3'utr Dnz1 FlyBase G7646.1 TTTTAGTTTTTAATCAATGTGTGTGTGATTATTTTTAAACGACCTATCCCCCTGCCCGCAG 18 10855101 0.922126064 6 15 167 0.884615385 1.361727836 0.038461538 0.222222222 0.461538462 18 3 0 23 2L:10855060-10855120 7 11.5 48 FBgn0027453 422.0233333 26.38 40.35333333 0.027249678 0.435936315 0.284982653 3 4 3.5 0.15 dme-miR-277-3p 6mer3-8 TGCATT 2L 10856854 10856859 - 2L_10856854_10856859_- 0.999998803 0.999991387 0.999995095 5.23E-06 aurB FBtr0080180 10856795 10856872 2L - 10856827 10856865 3'utr aurB FlyBase G9895.1 CGAGTTTGCATTGTGTAACGACTTATTTCAGATTTTACT 15 10856852 0.681237911 6 14 134 0.944444444 1.230448921 0.833333333 0.133333333 0.277777778 15 1 0 17 2L:10856827-10856865 6 aurB FBtr0080180 10856795 10856872 TGCATT 6mer3-8 dme-miR-277-3p 2L - 10856828 10856864 3'utr aurB FlyBase G7648.1 GAGTTTGCATTGTGTAACGACTTATTTCAGATTTTAC 9 10856839 0.898906544 5 7 91 0.785714286 1.041392685 0.357142857 0.444444444 0.642857143 9 3 0 11 2L:10856828-10856864 6 9 49 FBgn0024227 390.6033333 40.1 60.70333333 0.023041278 0.224438903 0.148262039 -7 -20 -13.5 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2L 10981725 10981731 + 2L_10981725_10981731_+ 0.801343958 0.803983974 0.802663966 0.001866762 SCAR FBtr0305255|FBtr0305256|FBtr0329949|FBtr0340223|FBtr0080148 10981664|10981664|10981664|10981664|10981664 10982293|10982395|10982395|10982395|10981854 2L + 10981708 10981770 stop_codon SCAR FlyBase G3987.1 AAAAAGAAGAAGTAATTCCAAAGAGAATTAATCCATACGATGGTCGAAACCAAGCGTGGTATG 64 10981723 0.685091898 4 63 203 0.987654321 1.903089987 0.086419753 0.203125 0.37037037 64 1 0 80 2L:10981708-10981770 7 SCAR FBtr0329949|FBtr0305255|FBtr0340223|FBtr0305256 10981664|10981664|10981664|10981664 10982395|10982293|10982395|10982395 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2L + 10981622 10981768 stop_codon SCAR FlyBase G3146.1 ACGACAGCGAGGGCTGGATGGAACCGAACGAAACATCGGCTTGATCCCTGATTAACTCGTTAAAGCCTGACATAATTCTAAAAAACAAAAAGAAGAAGTAATTCCAAAGAGAATTAATCCATACGATGGTCGAAACCAAGCGTGGTA 49 10981723 0.934655962 9 48 182 1 1.880813592 0.026315789 0.408163265 0.618421053 49 0 0 76 2L:10981622-10981768 7 49 50 FBgn0041781 1138.273333 48.57333333 74.31 0.043047657 1.008783969 0.659399812 2 2 2 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 2L 10981930 10981936 + 2L_10981930_10981936_+ 0.58649648 0.619972571 0.603234525 0.023671177 SCAR FBtr0305255|FBtr0329950|FBtr0305256|FBtr0329949|FBtr0340223 10981664|10981721|10981664|10981664|10981664 10982293|10982395|10982395|10982395|10982395 2L + 10981849 10982118 3'utr SCAR FlyBase G3988.2 AAAATCAAAAGTTTCATTGAATTGTATATACACCAACGAGTAATTATCGTTAAATTAATCGCTATAGTGAACGAACGCATTTGCATTTTAAGCCTAGACGACAATCCAAGGAAAGCGATTTAAAAGACTTGCTAATTTTGTTCGCTTCTTTGGAGTCAAGGTCTGAGTAGATATGGGCTTCTGTATCATAGTAGTCGGTGTTTGGATATTAAATTATAAATAATCGATATTATCACTGAACTCAATCCTACCCCAACTTGCAATCGATAC 112 10981929 0.983048478 24 105 795 0.939393939 1.394451681 0.21969697 0.151785714 0.28030303 112 4 4 124 2L:10981849-10982118 7 SCAR FBtr0329949|FBtr0305255|FBtr0340223|FBtr0305256|FBtr0329950 10981664|10981664|10981664|10981664|10981721 10982395|10982293|10982395|10982395|10982395 TGCATTT 7mer-m8 dme-miR-277-3p 2L + 10981909 10981986 3'utr SCAR FlyBase G3147.1 GCTATAGTGAACGAACGCATTTGCATTTTAAGCCTAGACGACAATCCAAGGAAAGCGATTTAAAAGACTTGCTAATTT 23 10981929 0.981091321 5 21 148 0.921052632 1.544068044 0.315789474 0.434782609 0.657894737 23 3 0 35 2L:10981909-10981986 7 29 51 FBgn0041781 1138.273333 48.57333333 74.31 0.025477185 0.59703541 0.390257031 1 1 1 0.15 dme-miR-8-3p 6mer3-8 CAGTAT 2L 10982205 10982210 + 2L_10982205_10982210_+ 0.992318268 0.989634967 0.990976617 0.00189738 SCAR FBtr0305255|FBtr0329950|FBtr0305256|FBtr0329949|FBtr0340223 10981664|10981721|10981664|10981664|10981664 10982293|10982395|10982395|10982395|10982395 2L + 10982176 10982221 3'utr SCAR FlyBase G3989.1 ATTAAAATATATCGAACTCCGTAGCATTTCAGTATACTCAACAAGC 12 10982203 0.672943577 5 12 79 1 1.146128036 0.142857143 0.166666667 0.285714286 12 0 0 14 2L:10982176-10982221 6 SCAR FBtr0329949|FBtr0305255|FBtr0340223|FBtr0305256|FBtr0329950 10981664|10981664|10981664|10981664|10981721 10982395|10982293|10982395|10982395|10982395 CAGTAT 6mer3-8 dme-miR-8-3p 2L + 10982183 10982287 3'utr SCAR FlyBase G3149.1 TATATCGAACTCCGTAGCATTTCAGTATACTCAACAAGCTATGAAATTGTATTATCCTTGTGAAAGTTAAATACCTGTATAATTAATAAAATATGTTTCACGAAT 18 10982203 0.982929762 7 17 131 0.903225806 1.447158031 0 0.5 0.709677419 18 3 0 28 2L:10982183-10982287 6 11 52 FBgn0041781 1138.273333 48.57333333 74.31 0.00966376 0.226461707 0.148028529 2 2 2 0.15 dme-miR-8-3p 8mer-A1 CAGTATTA 2L 10989220 10989227 + 2L_10989220_10989227_+ 0.671696326 0.671680361 0.671688344 1.12E-05 CG12253 FBtr0080149 10989166 10989241 2L + 10989204 10989232 3'utr CG12253 FlyBase G3994.1 TACAATTTGTAACTTTCAGTATTAAAATT 10 10989218 0.713310949 5 10 97 1 1.079181246 0 0.2 0.333333333 10 0 0 12 2L:10989204-10989232 8 CG12253 FBtr0080149 10989166 10989241 CAGTATTA 8mer-A1 dme-miR-8-3p 2L + 10989207 10989233 3'utr CG12253 FlyBase G3150.1 AATTTGTAACTTTCAGTATTAAAATTA 5 10989218 0.750055121 2 4 44 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2L:10989207-10989233 8 7.5 53 FBgn0026148 79.66666667 7.916666667 12.16 0.094142259 0.947368421 0.616776316 2 2 2 0.15 dme-miR-2a-2-5p 8mer-A1 TGATGAGA 2L 11013291 11013298 - 2L_11013291_11013298_- 0.593443064 0.591541188 0.592492126 0.001344846 Samuel FBtr0080161|FBtr0331197 11013204|11013204 11014199|11014199 2L - 11013271 11013315 3'utr Samuel FlyBase G9962.1 TTTCTACAAAATAGGCATGATGAGAATGAACTTGATTTATTTTAT 66 11013295 0.84673306 4 65 303 1 1.913813852 0.024390244 0.196969697 0.353658537 66 0 0 82 2L:11013271-11013315 8 Samuel FBtr0080161|FBtr0331197 11013204|11013204 11014199|11014199 TGATGAGA 8mer-A1 dme-miR-2a-2-5p 2L - 11013269 11013308 3'utr Samuel FlyBase G7697.1 AAAATAGGCATGATGAGAATGAACTTGATTTATTTTATAC 42 11013295 0.908976223 4 40 185 0.971428571 1.832508913 0.014285714 0.404761905 0.642857143 42 2 0 68 2L:11013269-11013308 8 52.5 54 FBgn0032330 367.82 9.873333333 15.09333333 0.142732858 5.31735314 3.47835689 -3 -3 -3 0.15 dme-miR-7-5p 8mer-A1 GTCTTCCA 2L 11013949 11013956 - 2L_11013949_11013956_- 0.675376043 0.675381551 0.675378797 3.96E-06 Samuel FBtr0080161|FBtr0331197 11013204|11013204 11014199|11014199 2L - 11013943 11013978 3'utr Samuel FlyBase G9966.1 GAGAAACAACAATAATCGCAAAGTCTTCCATTTGCA 5 11013948 0.963936234 3 5 30 1 0.698970004 0.2 0 0 5 0 0 5 2L:11013943-11013978 8 Samuel FBtr0080161|FBtr0331197 11013204|11013204 11014199|11014199 GTCTTCCA 8mer-A1 dme-miR-7-5p 2L - 11013944 11013976 3'utr Samuel FlyBase G7699.1 GAAACAACAATAATCGCAAAGTCTTCCATTTGC 5 11013950 0.885494638 4 5 27 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 2L:11013944-11013976 8 5 55 FBgn0032330 367.82 9.873333333 15.09333333 0.013593606 0.506414585 0.331272085 -8 -6 -7 0.15 dme-miR-1007-3p 7mer-m8 TGAGCTT 2L 11014119 11014125 - 2L_11014119_11014125_- 0.552338812 0.55301542 0.552677116 0.000478428 Samuel FBtr0080161|FBtr0331197 11013204|11013204 11014199|11014199 2L - 11014100 11014150 3'utr Samuel FlyBase G9968.1 TCACCTGCTAAAATGCTGAACCAAATGAGCTTTCAACACAATTAAGAAAGG 131 11014125 0.946624692 5 130 563 1 2.195899652 0.420382166 0.167938931 0.305732484 131 0 0 157 2L:11014100-11014150 7 Samuel FBtr0080161|FBtr0331197 11013204|11013204 11014199|11014199 TGAGCTT 7mer-m8 dme-miR-1007-3p 2L - 11014110 11014141 3'utr Samuel FlyBase G7700.1 AAAATGCTGAACCAAATGAGCTTTCAACACAA 86 11014125 0.949480115 2 86 351 1 2.08278537 0.595041322 0.302325581 0.504132231 86 0 0 121 2L:11014110-11014141 7 108 56 FBgn0032330 367.82 9.873333333 15.09333333 0.29362188 10.93855503 7.155477032 0 0 0 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2L 1103593 1103598 - 2L_1103593_1103598_- 0.814929349 0.818298474 0.816613912 0.002382384 mtRNApol FBtr0077989|FBtr0332273 1103481|1103252 1103690|1103690 2L - 1103574 1103618 3'utr mtRNApol FlyBase G6728.1 TGAACAATTCGGCTTTCGATACCAAAAAACACGAAGGAAGACAGA 54 1103599 0.977377824 4 54 209 1 1.785329835 0.147540984 0.111111111 0.213114754 54 0 0 61 2L:1103574-1103618 6 mtRNApol FBtr0332273|FBtr0077989 1103252|1103481 1103690|1103690 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 1103569 1103618 3'utr mtRNApol FlyBase G5258.1 TGAACAATTCGGCTTTCGATACCAAAAAACACGAAGGAAGACAGAAGCTA 36 1103599 0.974249827 4 35 140 0.981132075 1.414973348 0.094339623 0.25 0.490566038 36 0 1 52 2L:1103569-1103618 6 44 57 FBgn0261938 910.7533333 24.69666667 38.17333333 0.048311654 1.781616952 1.152637094 1 1 1 0.15 dme-miR-965-3p 6mer2-7 ACGCTT 2L 11095578 11095583 - 2L_11095578_11095583_- 0.999974644 0.99432787 0.997151257 0.00399282 Ge-1 FBtr0080232|FBtr0080231 11095148|11095351 11095687|11095687 2L - 11095563 11095603 3'utr Ge-1 FlyBase G9972.1 ACAAACACATTTATAAATACACGCTTGTAGTTAAGTCCAAA 9 11095586 0.849635666 3 8 73 0.888888889 0.903089987 0 0 0 9 1 0 8 2L:11095563-11095603 6 Ge-1 FBtr0080232|FBtr0080231 11095148|11095351 11095687|11095687 ACGCTT 6mer2-7 dme-miR-965-3p 2L - 11095520 11095601 3'utr Ge-1 FlyBase G7701.1 AAACACATTTATAAATACACGCTTGTAGTTAAGTCCAAAAAGAAGTTAGTATGCTAAAAAGCTCTCAGCTAAGTTCATCCCT 10 11095576 0.987074551 6 9 73 0.842105263 1.204119983 0 0.6 0.789473684 10 3 0 16 2L:11095520-11095601 6 8 58 FBgn0032340 1621.653333 39.62666667 60.70666667 0.004933237 0.201884253 0.131781243 3 -7 -2 0.15 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 11102606 11102611 - 2L_11102606_11102611_- 0.964415546 0.884770354 0.92459295 0.05631759 Reps FBtr0306139|FBtr0080230 11100961|11100961 11102626|11102626 2L - 11102552 11102629 stop_codon Reps FlyBase G9994.1 TAAGCAGCGAAAATGATCATGTGAATGAGGGTGAATCGATTTATTTTTGGGCGATATGTGACTTTCGTTTGCCTGTGT 16 11102604 0.978453119 5 15 106 0.9375 1.176091259 0.375 0 0 16 1 0 15 2L:11102552-11102629 6 Reps FBtr0306139|FBtr0080230 11100961|11100961 11102626|11102626 ATGTGA 6mer3-8 dme-miR-1003-3p 2L - 11102555 11102620 3'utr Reps FlyBase G7719.1 AAAATGATCATGTGAATGAGGGTGAATCGATTTATTTTTGGGCGATATGTGACTTTCGTTTGCCTG 13 11102604 0.896656608 5 12 87 0.904761905 0.801632346 0 0.384615385 0.619047619 13 0 2 19 2L:11102555-11102620 6 11.5 59 FBgn0032341 1121.163333 28.39333333 43.52333333 0.010257203 0.405024654 0.264226086 -7 -7 -7 0.15 dme-miR-965-3p 7mer-m8 TACGCTT 2L 11110556 11110562 + 2L_11110556_11110562_+ 0.620190429 0.62017552 0.620182974 1.05E-05 l(2)gd1 FBtr0080197|FBtr0306138 11110434|11110434 11110851|11110851 2L + 11110512 11110605 3'utr l(2)gd1 FlyBase G4062.1 GTTTGTAAATATCCCTCACAGAAAATTCAATTTATCTAAGTATGTACGCTTTTGCCGATTCCTTCGCAGGAAGAAGGCATTTATATATTACGAA 155 11110563 0.989691289 10 145 1420 0.936507937 1.645913275 0.264550265 0.167741935 0.317460317 155 9 3 177 2L:11110512-11110605 7 l(2)gd1 FBtr0306138|FBtr0080197 11110434|11110434 11110851|11110851 TACGCTT 7mer-m8 dme-miR-965-3p 2L + 11110521 11110625 3'utr l(2)gd1 FlyBase G3192.1 TATCCCTCACAGAAAATTCAATTTATCTAAGTATGTACGCTTTTGCCGATTCCTTCGCAGGAAGAAGGCATTTATATATTACGAACACAACACATATAATGTACT 77 11110563 0.987945002 16 74 663 0.975 2.068185862 0.15 0.337662338 0.575 77 3 0 117 2L:11110521-11110625 7 104.5 60 FBgn0261983 621.6366667 24.99666667 38.09666667 0.168104627 4.180557408 2.743022137 -7 -7 -7 0.15 dme-miR-283-5p 7mer-m8 TGATATT 2L 11110662 11110668 + 2L_11110662_11110668_+ 0.620203646 0.619877021 0.620040333 0.000230941 l(2)gd1 FBtr0080197|FBtr0306138 11110434|11110434 11110851|11110851 2L + 11110653 11110715 3'utr l(2)gd1 FlyBase G4064.1 ATGTATATATGATATTGCCGGCGTTAAGGCGAAGGCGCAAGTCCAGAAGATTGTGCCGGTGAA 10 11110667 0.747844062 7 8 49 0.916666667 1.041392685 0.083333333 0.2 0.333333333 10 1 0 11 2L:11110653-11110715 7 l(2)gd1 FBtr0306138|FBtr0080197 11110434|11110434 11110851|11110851 TGATATT 7mer-m8 dme-miR-283-5p 2L + 11110651 11110719 3'utr l(2)gd1 FlyBase G3193.1 ATATGTATATATGATATTGCCGGCGTTAAGGCGAAGGCGCAAGTCCAGAAGATTGTGCCGGTGAAGTCA 8 11110676 0.886655924 6 8 31 1 1.079181246 0.166666667 0.25 0.5 8 0 0 12 2L:11110651-11110719 7 4.5 61 FBgn0261983 621.6366667 24.99666667 38.09666667 0.007238955 0.180024003 0.11812057 -5 -14 -9.5 0.15 dme-miR-79-3p 7mer-m8 TAGCTTT 2L 11110789 11110795 + 2L_11110789_11110795_+ 0.618747957 0.619815211 0.619281584 0.000754624 l(2)gd1 FBtr0080197|FBtr0306138 11110434|11110434 11110851|11110851 2L + 11110760 11110806 3'utr l(2)gd1 FlyBase G4065.1 ACTAGCGCCTAGCCGAAACCTGATTATGTTAGCTTTCACATTGCATA 15 11110787 0.741500413 4 14 119 0.875 1.146128036 0 0.066666667 0.125 15 2 0 14 2L:11110760-11110806 7 l(2)gd1 FBtr0306138|FBtr0080197 11110434|11110434 11110851|11110851 TAGCTTT 7mer-m8 dme-miR-79-3p 2L + 11110754 11110801 3'utr l(2)gd1 FlyBase G3194.1 CGGTCCACTAGCGCCTAGCCGAAACCTGATTATGTTAGCTTTCACATT 12 11110787 0.98590921 2 11 96 0.9375 1.176091259 0 0.333333333 0.5 12 1 0 15 2L:11110754-11110801 7 11 62 FBgn0261983 621.6366667 24.99666667 38.09666667 0.017695224 0.440058674 0.288739172 2 2 2 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 2L 11144 11149 - 2L_11144_11149_- 0.999999911 0.999999988 0.99999995 7.07E-08 l(2)gl FBtr0078168|FBtr0306591|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0306590|FBtr0078170|FBtr0330655|FBtr0078171|FBtr0306592|FBtr0078166 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11214|11214|11214|11214|11309|11214|11214|11214 2L - 11126 11211 3'utr l(2)gl FlyBase G6264.1 TGACAGAAGCCGTAACCTACTAATTATTTTATACCTTTACAGAAATACGACGCAAACGAGTACTAGTCCTGATGTAATTTAATCTA 132 11150 0.942780601 10 126 653 0.956521739 1.710399466 0.167701863 0.174242424 0.322981366 132 5 2 154 2L:11126-11211 6 l(2)gl FBtr0306592|FBtr0306590|FBtr0078166|FBtr0330655|FBtr0078171|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0078170|FBtr0078168|FBtr0306591 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11309|11214|11214|11214|11214|11214|11214|11214 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 2L - 11075 11173 3'utr l(2)gl FlyBase G4888.1 ACAGAAATACGACGCAAACGAGTACTAGTCCTGATGTAATTTAATCTATAATTACAAACATGTCTCACTAAAAATCGAACGGGGACAGCAAAATAGGAA 109 11142 0.961532016 8 105 523 0.97752809 1.939519253 0.101123596 0.412844037 0.640449438 109 3 1 174 2L:11075-11173 6 115 63 FBgn0002121 6538.69 148.3266667 227.85 0.017587621 0.775315745 0.504718016 1 -7 -3 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 1114826 1114831 - 2L_1114826_1114831_- 0.970680892 0.998262345 0.984471618 0.019502995 Pino FBtr0077988|FBtr0077988|FBtr0077988|FBtr0332272|FBtr0332272|FBtr0332272|FBtr0077987|FBtr0077987|FBtr0077987 1114652|1114652|1114652|1114652|1114652|1114652|1114652|1114652|1114652 1115733|1115733|1115733|1115733|1115733|1115733|1115733|1115733|1115733 2L - 1114722 1114932 3'utr Pino FlyBase G6741.1 TCTCCAAGGGAAAAGTGAAAGCGCATAGAAATGAGCAATTAAGGATGTGAAAACACGCACAAGGAAACAATTGAAAAGCATTACTCAAAGTTGAAGATTTTCTGTGAAAATCCATATGACATGTAGAAGTTTATACCTAATATATACACCTATATATTATATACCACATAAATCTGCATACAATATACATAAATATATATATATTTTTAAT 160 1114833 0.982222612 24 151 1135 0.952380952 1.77815125 0.142857143 0.15625 0.285714286 160 7 2 180 2L:1114722-1114932 6 Pino FBtr0077988|FBtr0077988|FBtr0077988|FBtr0332272|FBtr0332272|FBtr0332272|FBtr0077987|FBtr0077987|FBtr0077987 1114652|1114652|1114652|1114652|1114652|1114652|1114652|1114652|1114652 1115733|1115733|1115733|1115733|1115733|1115733|1115733|1115733|1115733 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 1114781 1114967 3'utr Pino FlyBase G5268.1 AGTGCTCAACAAAGTAACTACAGGATTGAACAATTTCTCCAAGGGAAAAGTGAAAGCGCATAGAAATGAGCAATTAAGGATGTGAAAACACGCACAAGGAAACAATTGAAAAGCATTACTCAAAGTTGAAGATTTTCTGTGAAAATCCATATGACATGTAGAAGTTTATACCTAATATATACACCTA 87 1114834 0.984882169 26 77 623 0.888 1.142232992 0.112 0.356321839 0.552 87 7 7 111 2L:1114781-1114967 6 53 64 FBgn0016926 853.46 50.28 77.25 0.062100157 1.054097056 0.686084142 2 3 2.5 0.15 dme-miR-283-5p 8mer-A1 TGATATTA 2L 1115267 1115274 - 2L_1115267_1115274_- 0.43890516 0.360431438 0.399668299 0.055489356 Pino FBtr0077988|FBtr0332272|FBtr0077987 1114652|1114652|1114652 1115733|1115733|1115733 2L - 1115161 1115466 3'utr Pino FlyBase G6744.1 GTTTTATGATTTCACCGGTATCGTTTTCGTTCCGATTCGTTGTGTGACAGTGCAAATATTTAGCAACTAAGTTAGTTCCTTTGTTTACCTTCCAATGGCACCATTTGGTTTGCGCACATTACCTGTTCTATCCAGGAGAAGACTTCTTTCTGCCTAGACTTAAGCCGAGTTTAGGCAATGCAGTGATAACGGTGATATTAGCCAGAAAGAATCGTGAGCAAATAGTGAATTTACATGATGTAGCAAATGTCTAACGATAGCTATAGATCGACATGAGATGATCATTTTTGTATAACCCCACACGCA 443 1115288 0.971095918 61 427 2948 0.965973535 2.106360909 0.228733459 0.162528217 0.298676749 443 15 3 511 2L:1115161-1115466 8 Pino FBtr0077988|FBtr0332272|FBtr0077987 1114652|1114652|1114652 1115733|1115733|1115733 TGATATTA 8mer-A1 dme-miR-283-5p 2L - 1115224 1115474 3'utr Pino FlyBase G5271.2 AATCTTTTGTTTTATGATTTCACCGGTATCGTTTTCGTTCCGATTCGTTGTGTGACAGTGCAAATATTTAGCAACTAAGTTAGTTCCTTTGTTTACCTTCCAATGGCACCATTTGGTTTGCGCACATTACCTGTTCTATCCAGGAGAAGACTTCTTTCTGCCTAGACTTAAGCCGAGTTTAGGCAATGCAGTGATAACGGTGATATTAGCCAGAAAGAATCGTGAGCAAATAGTGAATTTACATGATGTAG 385 1115288 0.901952578 52 361 2408 0.935587762 2.162116141 0.241545894 0.420779221 0.640901771 385 37 3 581 2L:1115224-1115474 8 144.5 65 FBgn0016926 853.46 50.28 77.25 0.169310805 2.873906126 1.870550162 14 14 14 0.15 dme-miR-14-3p 7mer-m8 AAGACTG 2L 11180259 11180265 + 2L_11180259_11180265_+ 0.671714222 0.671749437 0.67173183 2.49E-05 CG4788 FBtr0080202 11179989 11180430 2L + 11180237 11180278 3'utr CG4788 FlyBase G4104.1 ACATAGATGTTTTCAAACAATTAAGACTGGAAAAATACAAAA 11 11180257 0.95103807 2 10 47 1 1.146128036 0.071428571 0.090909091 0.285714286 11 0 0 14 2L:11180237-11180278 7 CG4788 FBtr0080202 11179989 11180430 AAGACTG 7mer-m8 dme-miR-14-3p 2L + 11180239 11180272 3'utr CG4788 FlyBase G3217.1 ATAGATGTTTTCAAACAATTAAGACTGGAAAAAT 9 11180257 0.808056068 3 7 55 0.8 0.903089987 0 0.111111111 0.2 9 2 0 8 2L:11180239-11180272 7 9.5 66 FBgn0032354 97.66666667 9.44 14.38333333 0.097269625 1.006355932 0.660486674 2 2 2 0.15 dme-miR-2b-2-5p 7mer-A1 TGAAGAA 2L 11227 11233 - 2L_11227_11233_- 0.796288264 0.796647904 0.796468084 0.000254276 l(2)gl FBtr0330655 9837 11309 2L - 11216 11295 stop_codon l(2)gl FlyBase G6265.1 ACAAACATTTCTCATGAAAAAACGAACGGAGACAACAAAATAGGAACGCCAAAAACAGCGCCTGAAGAAAGCCAATTTTA 12 11233 0.934810111 4 11 11 0.928571429 1.113943352 0.142857143 0.166666667 0.285714286 12 1 0 13 2L:11216-11295 7 l(2)gl FBtr0330655 9837 11309 TGAAGAA 7mer-A1 dme-miR-2b-2-5p 2L - 11217 11254 3'utr l(2)gl FlyBase G4889.1 AGGAACGCCAAAAACAGCGCCTGAAGAAAGCCAATTTT 9 11233 0.514032001 2 8 8 1 1.176091259 0 0.444444444 0.666666667 9 0 0 15 2L:11217-11254 7 8.5 67 FBgn0002121 6538.69 148.3266667 227.85 0.001299955 0.057305946 0.037305245 0 0 0 0.15 dme-miR-14-3p 8mer-A1 AAGACTGA 2L 11277478 11277485 + 2L_11277478_11277485_+ 0.643516667 0.64339037 0.643453518 8.93E-05 cana FBtr0344017|FBtr0091678|FBtr0344016 11277334|11277334|11277334 11277846|11277846|11277846 2L + 11277439 11277526 intron-3'utr cana FlyBase G4113.1 AGGTGGCAATTGCCACTGCGAGCAGCGGAGCTGCAAACAAAGACTGAGTTCGGACTGGAGGCAAAACGTTGAGTTCAACGATGATAAA 54 11277493 0.945825481 7 48 189 0.916666667 1.439332694 0.316666667 0.092592593 0.183333333 54 4 1 55 2L:11277439-11277526 8 cana FBtr0344017|FBtr0091678|FBtr0344016 11277334|11277334|11277334 11277846|11277846|11277846 AAGACTGA 8mer-A1 dme-miR-14-3p 2L + 11277448 11277521 3'utr cana FlyBase G3221.1 TTGCCACTGCGAGCAGCGGAGCTGCAAACAAAGACTGAGTTCGGACTGGAGGCAAAACGTTGAGTTCAACGATG 37 11277488 0.942388917 6 32 128 0.915254237 1.130333768 0.576271186 0.378378378 0.610169492 37 2 3 54 2L:11277448-11277521 8 35.5 68 FBgn0040233 712.72 14.75333333 22.66 0.049809182 2.406235879 1.566637246 -15 -10 -12.5 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC 2L 112797 112803 + 2L_112797_112803_+ 0.65880311 0.66159529 0.6601992 0.001974384 Sam-S FBtr0330656|FBtr0089428 112780|112740 114432|114210 2L + 112764 112818 stop_codon Sam-S FlyBase G455.2 AAACGAAAAGATTGCTGAGCTGCGTCGCTCAGATGTGTTCTGGTGGGCTCGCCCC 14 112804 0.976396693 4 13 82 0.894736842 1.230448921 0.315789474 0.285714286 0.473684211 14 2 0 17 2L:112764-112818 7 Sam-S FBtr0089428|FBtr0330656 112740|112780 114210|114432 TGTGTTC 7mer-m8 dme-miR-317-3p 2L + 112723 112822 stop_codon Sam-S FlyBase G382.1 GAGGAATGTATGCCCCTAACCGTCGTTTTGGCTCACAAACTAAACGAAAAGATTGCTGAGCTGCGTCGCTCAGATGTGTTCTGGTGGGCTCGCCCCGATT 21 112804 0.980591471 8 20 141 0.95 1.579783597 0.25 0.571428571 0.775 21 2 0 38 2L:112723-112822 7 12.5 69 FBgn0005278 1886.66 102.5866667 157.21 0.006625465 0.121848193 0.079511481 -7 -7 -7 0.15 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 11281713 11281719 + 2L_11281713_11281719_+ 0.667215042 0.77752708 0.722371061 0.078002434 Ppt2 FBtr0080212 11281669 11281920 2L + 11281593 11281750 stop_codon Ppt2 FlyBase G4121.1 AAACCCCATGTTCATCATCTTGCCTGGCACACGCGAAGGGATGTCATCCACGAAGTGATATTTCCATATCTGGACTGAATAAGAAACCAAAACTACTGAACTATACTGAGCGATCAAACGGCTGTGATCGGAAAGGCGGACAAAGGCTCACTCTCATC 86 11281698 0.969928004 18 70 398 0.83 1.317018101 0.25 0.127906977 0.25 86 14 3 83 2L:11281593-11281750 7 Ppt2 FBtr0080212 11281669 11281920 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L + 11281589 11281749 stop_codon Ppt2 FlyBase G3230.1 GGTCAAACCCCATGTTCATCATCTTGCCTGGCACACGCGAAGGGATGTCATCCACGAAGTGATATTTCCATATCTGGACTGAATAAGAAACCAAAACTACTGAACTATACTGAGCGATCAAACGGCTGTGATCGGAAAGGCGGACAAAGGCTCACTCTCAT 57 11281698 0.975088893 16 45 279 0.822222222 1.392110465 0.255555556 0.368421053 0.6 57 14 2 74 2L:11281589-11281749 7 36.5 70 FBgn0032358 64.33333333 6.69 10.29333333 0.567357513 5.455904335 3.545984456 15 15 15 0.15 dme-miR-33-5p 6mer3-8 CAATGC 2L 1132056 1132061 + 2L_1132056_1132061_+ 0.962430957 0.962608458 0.962519707 0.000125511 CG4552 FBtr0077956 1131952 1132411 2L + 1132041 1132130 3'utr CG4552 FlyBase G972.1 CAGAGACACAAAGTGCAATGCGCCGCTGCGAGCGGTGTAATAGTTTGTAATTGGCATTGTTTTCCTTGTATTAGCTGAAATAGTATAGTT 34 1132059 0.973325131 10 32 237 0.95 1.278753601 0.3 0.147058824 0.275 34 1 1 38 2L:1132041-1132130 6 CG4552 FBtr0077956 1131952 1132411 CAATGC 6mer3-8 dme-miR-33-5p 2L + 1132037 1132079 3'utr CG4552 FlyBase G780.1 AAATCAGAGACACAAAGTGCAATGCGCCGCTGCGAGCGGTGTA 12 1132059 0.974488497 2 9 33 0.933333333 1.146128036 0.4 0.25 0.4 12 1 0 14 2L:1132037-1132079 6 13 71 FBgn0031304 726.5833333 32.48666667 49.62 0.01789196 0.40016417 0.261991133 -3 -3 -3 0.15 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA 2L 1132193 1132200 + 2L_1132193_1132200_+ 0.621402762 0.626976185 0.624189473 0.003940989 CG4552 FBtr0077956 1131952 1132411 2L + 1132133 1132223 3'utr CG4552 FlyBase G973.1 TATTGTAAACGAAGCGCTGGCTGCAATTGTAACATAGTGCACTCGGTGCAGAGACCGGATTTGAAGAAAATAGTCGAACGTAGTCCCAGAT 32 1132192 0.962180837 7 30 156 0.951219512 1.113943352 0.243902439 0.25 0.414634146 32 0 2 39 2L:1132133-1132223 8 CG4552 FBtr0077956 1131952 1132411 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p 2L + 1132127 1132247 3'utr CG4552 FlyBase G781.1 AGTTCTTATTGTAAACGAAGCGCTGGCTGCAATTGTAACATAGTGCACTCGGTGCAGAGACCGGATTTGAAGAAAATAGTCGAACGTAGTCCCAGATCACATGGCCATCCCGAGCATGCCA 18 1132192 0.955255859 8 16 88 0.925925926 1.397940009 0.259259259 0.444444444 0.62962963 18 2 0 25 2L:1132127-1132247 8 15 72 FBgn0031304 726.5833333 32.48666667 49.62 0.020644569 0.461727888 0.302297461 1 1 1 0.15 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2L 113341 113346 + 2L_113341_113346_+ 0.91954592 0.913977408 0.916761664 0.003937524 Sam-S FBtr0330656|FBtr0089428 112780|112740 114432|114210 2L + 113296 113368 5'utr Sam-S FlyBase G458.2 TCTCACAAGTCACAAAAAGAACTTCTGGATATCATCCGTCGAAACTTTGACCTCAGGCCCGGCAAGATTGTCA 250 113342 0.685262887 9 243 1015 0.982698962 2.152288344 0.342560554 0.14 0.256055363 250 4 1 284 2L:113296-113368 6 Sam-S FBtr0089428|FBtr0330656 112740|112780 114210|114432 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2L + 113290 113363 5'utr Sam-S FlyBase G386.1 GGAACTTCTCACAAGTCACAAAAAGAACTTCTGGATATCATCCGTCGAAACTTTGACCTCAGGCCCGGCAAGAT 98 113342 0.935522472 5 96 369 0.992592593 2.127104798 0.318518519 0.295918367 0.488888889 98 1 0 134 2L:113290-113363 6 167 73 FBgn0005278 1886.66 102.5866667 157.21 0.088516214 1.627891864 1.062273392 -1 -1 -1 0.15 dme-miR-1008-3p 6mer2-7 GCTGTG 2L 113734 113739 + 2L_113734_113739_+ 0.996212122 0.99421438 0.995213251 0.001412587 Sam-S FBtr0330656|FBtr0089429|FBtr0089431|FBtr0089430|FBtr0089436|FBtr0089434|FBtr0089435|FBtr0089437|FBtr0089432|FBtr0089428|FBtr0089433 112780|113541|113541|113541|113541|113541|113541|113541|113541|112740|113541 114432|114432|114432|114432|114210|114432|114432|114432|114210|114210|114432 2L + 113694 113904 3'utr Sam-S FlyBase G461.2 TAGGCTTGCCAACTCTTATGGGCTTTCTTCTCTAACTTATGCTGTGCTCTTCGCTATATAATTTAAACCATTCTGATGTGTGTAGTCTTCTCACACGGAACTAGTTTTAGTCGTCTTAATACCCGCATATATACCTAATAGAGAGCTCCAAAAGAATTGATGAGCTTTAGTTATGCATATACATAGTATAGTGTCGGTCAGTTCAGTAAAA 148 113733 0.951739125 30 141 1345 0.947674419 1.610127613 0.13372093 0.162162162 0.279069767 148 6 3 163 2L:113694-113904 6 Sam-S FBtr0089433|FBtr0089432|FBtr0089428|FBtr0089437|FBtr0089435|FBtr0089434|FBtr0089436|FBtr0089430|FBtr0089431|FBtr0089429|FBtr0330656 113541|113541|112740|113541|113541|113541|113541|113541|113541|113541|112780 114432|114210|114210|114432|114432|114432|114210|114432|114432|114432|114432 GCTGTG 6mer2-7 dme-miR-1008-3p 2L + 113675 113877 3'utr Sam-S FlyBase G387.2 GTCAGAGGAGAAGGCGGCATAGGCTTGCCAACTCTTATGGGCTTTCTTCTCTAACTTATGCTGTGCTCTTCGCTATATAATTTAAACCATTCTGATGTGTGTAGTCTTCTCACACGGAACTAGTTTTAGTCGTCTTAATACCCGCATATATACCTAATAGAGAGCTCCAAAAGAATTGATGAGCTTTAGTTATGCATATACAT 79 113733 0.939056871 21 71 694 0.896551724 1.716003344 0.137931034 0.316455696 0.534482759 79 11 1 104 2L:113675-113877 6 45 74 FBgn0005278 1886.66 102.5866667 157.21 0.023851674 0.438653496 0.286241333 1 1 1 0.15 dme-miR-92b-3p 7mer-m1 TGCAATT 2L 11508892 11508898 - 2L_11508892_11508898_- 0.76542763 0.763330014 0.764378822 0.001483227 CG6509 FBtr0336630|FBtr0080247|FBtr0080246|FBtr0336631 11508397|11508397|11508772|11508397 11511170|11509299|11509299|11509299 2L - 11508876 11508967 3'utr CG6509 FlyBase G10060.1 AATTTATATATACCGTTTGGAACTAGATTTCCTTCTCTGGCGACATTCTAAGCCAAAAGTCTGTTTGTATGCAATTTATTATTATGTAATTG 22 11508902 0.985644958 12 20 174 0.931034483 1.431363764 0.068965517 0.272727273 0.448275862 22 2 0 27 2L:11508876-11508967 7 CG6509 FBtr0080246|FBtr0336631|FBtr0336630|FBtr0080247 11508772|11508397|11508397|11508397 11509299|11509299|11511170|11509299 TGCAATT 7mer-m1 dme-miR-92b-3p 2L - 11508897 11508944 3'utr CG6509 FlyBase G7755.1 TAGATTTCCTTCTCTGGCGACATTCTAAGCCAAAAGTCTGTTTGTATG 11 11508905 0.78637229 5 11 75 1 1.204119983 0 0.454545455 0.625 11 0 0 16 2L:11508897-11508944 1 3.5 75 FBgn0032363 893.76 15.01 22.98666667 0.00391604 0.233177881 0.152262181 4 7 5.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 11510219 11510226 - 2L_11510219_11510226_- 0.650171355 0.649421478 0.649796416 0.000530259 CG6509 FBtr0336630|FBtr0336630|FBtr0336630 11508397|11508397|11508397 11511170|11511170|11511170 2L - 11510184 11510250 5'utr CG6509 FlyBase G10068.1 ACTGCGTTCGGGTGAGGTGGTCGACTGTGATACGGGAACGGCCAGACGCGGCAGCACTTCGGCCAGA 6 11510233 0.979863718 4 4 27 0.714285714 0.698970004 0.428571429 0.166666667 0.285714286 6 2 0 5 2L:11510184-11510250 8 CG6509 FBtr0336630|FBtr0336630|FBtr0336630 11508397|11508397|11508397 11511170|11511170|11511170 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 11510210 11510245 5'utr CG6509 FlyBase G7759.1 GTTCGGGTGAGGTGGTCGACTGTGATACGGGAACGG 5 11510230 0.86229746 3 5 27 1 0.954242509 0.666666667 0.6 0.777777778 5 0 0 9 2L:11510210-11510245 8 4 76 FBgn0032363 893.76 15.01 22.98666667 0.004475474 0.266489007 0.174013921 7 4 5.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 11523071 11523077 - 2L_11523071_11523077_- 0.80135658 0.8003487 0.80085264 0.000712693 CG31705 FBtr0345719|FBtr0345719|FBtr0345719 11523019|11523019|11523019 11523549|11523549|11523549 2L - 11523054 11523094 3'utr CG31705 FlyBase G10102.1 CAGACCACTATAACATTTGTGATACAATAACAATTGGAAAA 11 11523079 0.970156949 3 11 79 1 1.041392685 0 0 0 11 0 0 11 2L:11523054-11523094 7 CG31705 FBtr0345719|FBtr0345719|FBtr0345719 11523019|11523019|11523019 11523549|11523549|11523549 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 11523064 11523093 3'utr CG31705 FlyBase G7779.1 AGACCACTATAACATTTGTGATACAATAAC 9 11523079 0.715347665 2 9 60 1 1.230448921 0 0.444444444 0.705882353 9 0 0 17 2L:11523064-11523093 7 10 77 FBgn0028490 1886.113333 87.62 132.81 0.005301908 0.114129194 0.075295535 2 2 2 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 2L 11523516 11523521 - 2L_11523516_11523521_- 0.987824679 0.990591658 0.989208169 0.001956564 CG31705 FBtr0345719|FBtr0321293|FBtr0080242 11523019|11523302|11523302 11523549|11523549|11523549 2L - 11523497 11523569 stop_codon CG31705 FlyBase G10105.1 TGGCCTACTGTCTCCACTAACGGCCCATTGCCTCCATACAATCCTTAATTGACTCAAGGACACAGTCTCGTTG 29 11523521 0.820683836 7 26 157 0.894736842 0.929418926 0.052631579 0.24137931 0.421052632 29 1 3 34 2L:11523497-11523569 6 CG31705 FBtr0080242|FBtr0321293|FBtr0345719 11523302|11523302|11523019 11523549|11523549|11523549 TTGACT 6mer3-8 dme-miR-1012-3p 2L - 11523496 11523551 stop_codon CG31705 FlyBase G7782.1 AACGGCCCATTGCCTCCATACAATCCTTAATTGACTCAAGGACACAGTCTCGTTGG 20 11523521 0.870384457 7 19 103 0.925925926 1.397940009 0 0.25 0.444444444 20 2 0 25 2L:11523496-11523551 6 21 78 FBgn0028490 1886.113333 87.62 132.81 0.011134008 0.239671308 0.158120623 0 0 0 0.15 dme-miR-14-3p 7mer-m8 AAGACTG 2L 1166384 1166390 + 2L_1166384_1166390_+ 0.671777125 0.670736033 0.671256579 0.000736169 IntS14 FBtr0077962 1166360 1166425 2L + 1166372 1166405 3'utr IntS14 FlyBase G990.1 TGTCCTTACTTTAAGACTGTGTTTACTTTGTAAT 6 1166381 0.895502368 5 6 63 1 0.903089987 0 0.166666667 0.375 6 0 0 8 2L:1166372-1166405 7 IntS14 FBtr0077962 1166360 1166425 AAGACTG 7mer-m8 dme-miR-14-3p 2L + 1166367 1166408 3'utr IntS14 FlyBase G793.1 TTTTATGTCCTTACTTTAAGACTGTGTTTACTTTGTAATACA 7 1166391 0.987049466 4 7 78 1 1.176091259 0 0.571428571 0.8 7 0 0 15 2L:1166367-1166408 7 6.5 79 FBgn0031314 268.3333333 16.95333333 25.93333333 0.024223602 0.383405427 0.250642674 3 -7 -2 0.15 dme-miR-283-5p 7mer-m8 TGATATT 2L 117202 117208 - 2L_117202_117208_- 0.611855317 0.593542147 0.602698732 0.012949388 CG4822 FBtr0100309|FBtr0100310|FBtr0330646 117077|117172|117077 119269|119426|119201 2L - 117100 117791 lincRNA_intron-lincRNA_exon CG4822 FlyBase G6309.1 AATATATCCTGATTAGTTCACTTATACTTTAGAATGCAATGTTCATGGGGCCAGTTCTCGCCGTGCCGCTGATCCTGCTTTCCATTTACGGCATTGGGTATGGCGGAGGAACATACATATCCCCTCTTATGAGGTTTCTCATGCATCTTAGCTACCTTCGCCATAGTATGGAAGGCCTAGTCGCATCCTTGTACGACTACGGACGCGCCGACACAATTTGCGAAGACACGGAAATCTTTTGCTCATTTAAAAAGTCGAAAGTTTTGTTAGCCTTTTTAGGATTCGAAAACATGCACTATTTGTGGTCTCTATCTTGCTTGATGAGTTTTTATTTGCTGTTCACCGTAGCAGCATACTTTATGATTAGACTGCGACTGAAACACTCCGAGGTCAGCCCCATTTTTGCATATGTCATACAGCTGTTAACGAAATATTTTAACTTTACTTCGTACAATTACTAACATTAACAACATGGGCGGTTTGACCTCGGTGCTAGAAAAATTATTTTAAGCGGTATTTCAGGGGACAGTCTTAACCTCCCATATTATTTATGGGCTTCAATAATATTAATAAACTATCAAAGTGATATTGGATTCTGAATAAAAGTTTATGATCAAGAATACAAATATAATCAAGGGAACAATAAATTACTATAATTCGATCATATTGTTAACAAGGCAGAAGAAACACTA 1262 117203 0.938729087 153 1181 9042 0.936821953 2.052782703 0.128908743 0.198098257 0.354179962 1262 87 12 1468 2L:117100-117791 7 CG4822 FBtr0100310|FBtr0330646|FBtr0100309 117172|117077|117077 119426|119201|119269 TGATATT 7mer-m8 dme-miR-283-5p 2L - 117098 117754 stop_codon CG4822 FlyBase G4924.1 AATGTTCATGGGGCCAGTTCTCGCCGTGCCGCTGATCCTGCTTTCCATTTACGGCATTGGGTATGGCGGAGGAACATACATATCCCCTCTTATGAGGTTTCTCATGCATCTTAGCTACCTTCGCCATAGTATGGAAGGCCTAGTCGCATCCTTGTACGACTACGGACGCGCCGACACAATTTGCGAAGACACGGAAATCTTTTGCTCATTTAAAAAGTCGAAAGTTTTGTTAGCCTTTTTAGGATTCGAAAACATGCACTATTTGTGGTCTCTATCTTGCTTGATGAGTTTTTATTTGCTGTTCACCGTAGCAGCATACTTTATGATTAGACTGCGACTGAAACACTCCGAGGTCAGCCCCATTTTTGCATATGTCATACAGCTGTTAACGAAATATTTTAACTTTACTTCGTACAATTACTAACATTAACAACATGGGCGGTTTGACCTCGGTGCTAGAAAAATTATTTTAAGCGGTATTTCAGGGGACAGTCTTAACCTCCCATATTATTTATGGGCTTCAATAATATTAATAAACTATCAAAGTGATATTGGATTCTGAATAAAAGTTTATGATCAAGAATACAAATATAATCAAGGGAACAATAAATTACTATAATTCGATCATATTGTTAACAAGGCAGAAGAAACACTACG 863 117203 0.982810554 128 792 5976 0.926584235 1.736396502 0.14992272 0.351100811 0.567233385 863 74 21 1199 2L:117098-117754 7 235.5 80 FBgn0031220 2984.836667 134.1266667 204.7566667 0.07889879 1.755802972 1.150145701 -5 -5 -5 0.15 dme-bantam-3p 7mer-m8 TGATCTC 2L 117839 117845 - 2L_117839_117845_- 0.656367756 0.658188117 0.657277936 0.001287146 CG4822 FBtr0100309|FBtr0100310|FBtr0330646 117077|117172|117077 119269|119426|119201 2L - 117809 118068 3'utr-intron CG4822 FlyBase G6310.1 GAAATCAATCTGTTAAAAAGGGAGTACAACAACCAGTGGTACCGTCTGAGCTCCTACTACGCAGCAATGGTTACCTCAAAGCTACCATCTATGTTTATTTTGGCCGTTATTTATCTATCCATTGTGTACTTAATGTCCAGCCAACCACTTGAATGGTTCCGCTTTGCCATGCTATTTACAATAGCTTTCGTAACGGCCCTAACTTCCGACAGTTTTGGCTTGTTGATCTCCAGTAGACTGAGCTTAGTGGTAAGCGATTT 4416 117846 0.849819808 65 4268 40796 0.967397521 2.290377115 0.186081983 0.154211957 0.287893232 4416 146 25 5074 2L:117809-118068 7 CG4822 FBtr0100310|FBtr0330646|FBtr0100309 117172|117077|117077 119426|119201|119269 TGATCTC 7mer-m8 dme-bantam-3p 2L - 117809 118076 3'utr-intron CG4822 FlyBase G4926.1 TTCCCACGGAAATCAATCTGTTAAAAAGGGAGTACAACAACCAGTGGTACCGTCTGAGCTCCTACTACGCAGCAATGGTTACCTCAAAGCTACCATCTATGTTTATTTTGGCCGTTATTTATCTATCCATTGTGTACTTAATGTCCAGCCAACCACTTGAATGGTTCCGCTTTGCCATGCTATTTACAATAGCTTTCGTAACGGCCCTAACTTCCGACAGTTTTGGCTTGTTGATCTCCAGTAGACTGAGCTTAGTGGTAAGCGATTT 2638 117846 0.83996091 58 2539 23816 0.962350547 2.072686363 0.188756042 0.354435178 0.566776902 2638 117 31 3783 2L:117809-118076 7 3173.5 81 FBgn0031220 2984.836667 134.1266667 204.7566667 1.063207255 23.6604702 15.49888486 1 1 1 0.15 dme-miR-980-3p 7mer-A1 GCAGCTA 2L 11796912 11796918 - 2L_11796912_11796918_- 0.81895187 0.822081724 0.820516797 0.002213103 crol FBtr0335474|FBtr0080262|FBtr0335475|FBtr0080263|FBtr0305262|FBtr0080261|FBtr0335473|FBtr0335476|FBtr0080260 11794325|11795170|11794325|11795170|11795170|11795494|11794325|11795167|11794325 11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124 2L - 11796907 11797013 3'utr crol FlyBase G10122.2 AGGCATGCGTGCCACCAGTGAGCCAGTGCTAGTGAGCCGAGCTGACGCGACTTCTCTAGATAGGACACACATCATAACAAGCGCACCCCATATAAGCAGCTAGTTGT 119 11796921 0.855509757 14 115 513 0.964285714 1.528273777 0.3 0.176470588 0.3 119 2 3 135 2L:11796907-11797013 7 crol FBtr0305262|FBtr0335473|FBtr0080261|FBtr0335476|FBtr0080260|FBtr0335474|FBtr0080262|FBtr0335475|FBtr0080263 11795170|11794325|11795494|11795167|11794325|11794325|11795170|11794325|11795170 11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124 GCAGCTA 7mer-A1 dme-miR-980-3p 2L - 11796821 11797006 3'utr crol FlyBase G7807.1 CGTGCCACCAGTGAGCCAGTGCTAGTGAGCCGAGCTGACGCGACTTCTCTAGATAGGACACACATCATAACAAGCGCACCCCATATAAGCAGCTAGTTGTATGTACAATAGTTTTAGCAGCGCGCTGGTTACGCTGATCGGTGGCCCCAAGCGGATATCGTGATACGCTGGGTTTCTAGGGTGTGT 126 11796921 0.844030463 28 112 658 0.880208333 1.324796718 0.276041667 0.365079365 0.583333333 126 16 7 169 2L:11796821-11797006 7 30 82 FBgn0020309 6740.04 140.5266667 216.61 0.004451012 0.213482613 0.138497761 3 3 3 0.15 dme-miR-1003-3p 6mer2-7 TGTGAG 2L 11810188 11810193 - 2L_11810188_11810193_- 0.923109358 0.967508121 0.945308739 0.031394622 CycY FBtr0333425 11810090 11811116 2L - 11810141 11810240 3'utr CycY FlyBase G10150.1 CGAGCGAGAGTTGCAAGGAGCACAGCGCAATATTAACCCAAAAGATTTGTGAGTAAATTAATGTACTAGACATATAAGGATACGAATTATATGCAAAATG 49 11810194 0.971613355 7 49 282 1 1.72427587 0.056603774 0.081632653 0.150943396 49 0 0 53 2L:11810141-11810240 6 CycY FBtr0333425 11810090 11811116 TGTGAG 6mer2-7 dme-miR-1003-3p 2L - 11810179 11810224 3'utr CycY FlyBase G7828.1 GGAGCACAGCGCAATATTAACCCAAAAGATTTGTGAGTAAATTAAT 23 11810194 0.967355399 4 22 119 0.948717949 1.568201724 0.128205128 0.47826087 0.692307692 23 2 0 37 2L:11810179-11810224 6 31.5 83 FBgn0032378 829.4 43.03666667 66.07 0.037979262 0.73193401 0.476767065 1 1 1 0.15 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 11810369 11810376 - 2L_11810369_11810376_- 0.624925254 0.625297737 0.625111496 0.000263327 CycY FBtr0333425 11810090 11811116 2L - 11810365 11810420 3'utr CycY FlyBase G10151.1 AATAACTCAATATGATTTCGTGTGATTCTTATATAGTTTCCATTTAGCTTTATATA 20 11810377 0.820306031 5 20 206 1 1.380211242 0.083333333 0.15 0.291666667 20 0 0 24 2L:11810365-11810420 8 CycY FBtr0333425 11810090 11811116 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 11810365 11810420 3'utr CycY FlyBase G7830.1 AATAACTCAATATGATTTCGTGTGATTCTTATATAGTTTCCATTTAGCTTTATATA 25 11810377 0.779495814 6 25 256 1 1.491361694 0.064516129 0.2 0.35483871 25 0 0 31 2L:11810365-11810420 8 14 84 FBgn0032378 829.4 43.03666667 66.07 0.016879672 0.325304004 0.211896473 1 1 1 0.15 dme-miR-31a-5p 6mer2-7 CTTGCC 2L 1181655 1181660 + 2L_1181655_1181660_+ 0.585751772 0.941417354 0.763584563 0.251493558 CG4896 FBtr0335394|FBtr0335395|FBtr0308698 1179902|1179230|1179230 1182454|1182454|1182454 2L + 1181586 1181662 3'utr CG4896 FlyBase G1009.1 TTGAAGCTAGCGTTGGGACTAAACGAGCCATTAGCGATGAATCTGACTACGTGGACTTCCAAAAACTTACTTGCCTG 14 1181639 0.799321 10 12 69 0.888888889 1.204119983 0.277777778 0.285714286 0.444444444 14 2 0 16 2L:1181586-1181662 6 CG4896 FBtr0308698|FBtr0335394|FBtr0335395 1179230|1179902|1179230 1182454|1182454|1182454 CTTGCC 6mer2-7 dme-miR-31a-5p 2L + 1181627 1181672 3'utr CG4896 FlyBase G803.1 TCTGACTACGTGGACTTCCAAAAACTTACTTGCCTGCTCTGCATGC 8 1181654 0.755305304 5 7 48 0.846153846 1.041392685 0 0.375 0.615384615 8 2 0 11 2L:1181627-1181672 6 5.5 85 FBgn0031319 314.3566667 11.06666667 17.08 0.01749605 0.496987952 0.322014052 16 1 8.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 118176 118182 - 2L_118176_118182_- 0.79783448 0.797986455 0.797910468 0.00010748 CG4822 FBtr0100309|FBtr0100309|FBtr0100309|FBtr0100310|FBtr0100310|FBtr0100310|FBtr0330646|FBtr0330646|FBtr0330646 117077|117077|117077|117172|117172|117172|117077|117077|117077 119269|119269|119269|119426|119426|119426|119201|119201|119201 2L - 118136 118303 3'utr CG4822 FlyBase G6311.1 CGTACATCAAGCTTAAGTTCTACATGAACATCGTTCTTGCTTTACTGGTGGGTTCGCTCTACTTTGGTATGGGAACCTCGGCCTCTAAAGCGCTTTTTAACTTCGGTTTCATGTTCACCATTGTGATAGCATACCTCTACCTTCCTATGATGCCTGTGCTCTTATATT 677 118183 0.799572564 41 607 5604 0.90295858 1.174954362 0.146745562 0.209748892 0.366863905 677 32 50 763 2L:118136-118303 7 CG4822 FBtr0100310|FBtr0100310|FBtr0100310|FBtr0330646|FBtr0330646|FBtr0330646|FBtr0100309|FBtr0100309|FBtr0100309 117172|117172|117172|117077|117077|117077|117077|117077|117077 119426|119426|119426|119201|119201|119201|119269|119269|119269 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 118136 118245 3'utr CG4822 FlyBase G4927.1 CTACTTTGGTATGGGAACCTCGGCCTCTAAAGCGCTTTTTAACTTCGGTTTCATGTTCACCATTGTGATAGCATACCTCTACCTTCCTATGATGCCTGTGCTCTTATATT 400 118183 0.793520742 26 359 3210 0.904040404 1.252853031 0.131313131 0.3625 0.570707071 400 28 29 537 2L:118136-118245 7 441 86 FBgn0031220 2984.836667 134.1266667 204.7566667 0.147746778 3.287936776 2.153776027 1 1 1 0.15 dme-miR-14-3p 6mer3-8 AAGACT 2L 1181949 1181954 + 2L_1181949_1181954_+ 0.995588487 0.946770413 0.97117945 0.03451961 CG4896 FBtr0335394|FBtr0335395|FBtr0308698 1179902|1179230|1179230 1182454|1182454|1182454 2L + 1181872 1182078 3'utr CG4896 FlyBase G1011.1 AGGAACGCAGGCTGAAGTACGGTGAGAGCGATCCTCCTCCACCAAATAGGAGCCGGGAGCGTTTCGAGCAAGAGATAAAGACTTTGCAGTCGCGCCAGAAGGATTCTTTTGGCGCCACTGCAGCCATGCCCATCAGTTCGACCAACGTGGGCAGCCGCCTGATGCAGAAGATGGGCTGGTCGGAGGGCCAGGGACTGGGCAAAAAGA 461 1181956 0.949576558 19 438 1900 0.952198853 1.998259338 0.544933078 0.114967462 0.219885277 461 21 4 498 2L:1181872-1182078 6 CG4896 FBtr0308698|FBtr0335394|FBtr0335395 1179230|1179902|1179230 1182454|1182454|1182454 AAGACT 6mer3-8 dme-miR-14-3p 2L + 1181862 1182074 3'utr CG4896 FlyBase G805.1 GATCGTGCCAAGGAACGCAGGCTGAAGTACGGTGAGAGCGATCCTCCTCCACCAAATAGGAGCCGGGAGCGTTTCGAGCAAGAGATAAAGACTTTGCAGTCGCGCCAGAAGGATTCTTTTGGCGCCACTGCAGCCATGCCCATCAGTTCGACCAACGTGGGCAGCCGCCTGATGCAGAAGATGGGCTGGTCGGAGGGCCAGGGACTGGGCAAA 333 1181956 0.8896486 20 327 1379 0.979338843 2.374748346 0.516528926 0.345345345 0.549586777 333 9 1 474 2L:1181862-1182074 6 350 87 FBgn0031319 314.3566667 11.06666667 17.08 1.113385009 31.62650602 20.49180328 -7 -7 -7 0.15 dme-miR-276a-3p 8mer-A1 AGTTCCTA 2L 11827385 11827392 - 2L_11827385_11827392_- 0.637906929 0.637145902 0.637526416 0.000538108 esc FBtr0080325 11827202 11827459 2L - 11827335 11827448 5'utr esc FlyBase G10163.1 GGCGCAACCACAAACCAAATCTCACGTGGCCAAAACTTACAACATTTCCCTCAATTAGTTCCTAGTTGGTTAGCATTAAGATATAGAATTACGCTCCTGTGCTGTTCCAAATTA 83 11827403 0.988596207 15 76 710 0.911111111 1.612783857 0.044444444 0.084337349 0.155555556 83 7 1 82 2L:11827335-11827448 8 esc FBtr0080325 11827202 11827459 AGTTCCTA 8mer-A1 dme-miR-276a-3p 2L - 11827336 11827422 5'utr esc FlyBase G7840.1 TGGCCAAAACTTACAACATTTCCCTCAATTAGTTCCTAGTTGGTTAGCATTAAGATATAGAATTACGCTCCTGTGCTGTTCCAAATT 49 11827403 0.769280404 7 42 388 0.869565217 1.477121255 0.043478261 0.326530612 0.52173913 49 8 1 60 2L:11827336-11827422 8 34 88 FBgn0000588 215.62 15.44 23.56 0.157684816 2.202072539 1.443123939 11 11 11 0.15 dme-bantam-3p 6mer3-8 TGATCT 2L 118798 118803 - 2L_118798_118803_- 0.991720744 0.990441669 0.991081206 0.00090439 CG4822 FBtr0100309|FBtr0100310|FBtr0330646 117077|117172|117077 119269|119426|119201 2L - 118514 118873 3'utr CG4822 FlyBase G6313.1 GGTTTAGACGATTTATCGAGTTCACAATGCATTGCCCTACTCAAAGTTTTGGCCGCCGGGGGGCGCACTGTGATCTGCTCCATCCATACGCCATCTGCCAAGATCTTCGAGATGCTCGATGCAGTCTACGTTCTAGCCGAAGGCCAGTGCGTCTACCAAGGAAAGGGGTCCAACATTGTACCTTTCTTGAAGAACTTTGGGCTTTGTTGTCCAATAACCTACAACCCGGCTGACTTCATTATCGAAGTTGCTTGCCTTGAGTATGGCGGGTCCTATCACGAGCCAATGGTAGAAGCCGTGGGCAACGGCAAAGTTGCGCGATGGAGTCCTCCAGCAGTGGAAGGTGAAACAACAACAACC 356 118798 0.969903548 64 339 2197 0.956416465 1.897627091 0.341404358 0.137640449 0.256658596 356 14 4 395 2L:118514-118873 6 CG4822 FBtr0100310|FBtr0330646|FBtr0100309 117172|117077|117077 119426|119201|119269 TGATCT 6mer3-8 dme-bantam-3p 2L - 118491 118868 3'utr CG4822 FlyBase G4930.1 AGACGATTTATCGAGTTCACAATGCATTGCCCTACTCAAAGTTTTGGCCGCCGGGGGGCGCACTGTGATCTGCTCCATCCATACGCCATCTGCCAAGATCTTCGAGATGCTCGATGCAGTCTACGTTCTAGCCGAAGGCCAGTGCGTCTACCAAGGAAAGGGGTCCAACATTGTACCTTTCTTGAAGAACTTTGGGCTTTGTTGTCCAATAACCTACAACCCGGCTGACTTCATTATCGAAGTTGCTTGCCTTGAGTATGGCGGGTCCTATCACGAGCCAATGGTAGAAGCCGTGGGCAACGGCAAAGTTGCGCGATGGAGTCCTCCAGCAGTGGAAGGTGAAACAACAACAACCAAAACCGACACCACATCGGGGGC 243 118798 0.975629668 54 233 1471 0.948275862 2.51851394 0.353448276 0.341563786 0.540229885 243 18 0 330 2L:118491-118868 6 110.5 89 FBgn0031220 2984.836667 134.1266667 204.7566667 0.037020451 0.823848104 0.539664968 -5 -5 -5 0.15 dme-miR-1007-3p 6mer3-8 TGAGCT 2L 118973 118978 - 2L_118973_118978_- 0.652319835 0.431742012 0.542030924 0.155972058 CG4822 FBtr0100309|FBtr0100310|FBtr0330646 117077|117172|117077 119269|119426|119201 2L - 118935 119065 3'utr CG4822 FlyBase G6314.1 TTTGGGAATGTTGCGCCTAAAAGACACCCTAAACACCATGGCTCAAAAGCTATCTGGGGGTGAGCGAAAGCGTTTATGCATTGCCCTTGAGCTGGTCAACAACCCACCTGTCATCTTTCTAGATGAACCTA 50 118984 0.748559659 20 49 277 0.984375 1.799340549 0.125 0.26 0.421875 50 1 0 63 2L:118935-119065 6 CG4822 FBtr0100310|FBtr0330646|FBtr0100309 117172|117077|117077 119426|119201|119269 TGAGCT 6mer3-8 dme-miR-1007-3p 2L - 118932 119066 3'utr CG4822 FlyBase G4931.1 TTTTGGGAATGTTGCGCCTAAAAGACACCCTAAACACCATGGCTCAAAAGCTATCTGGGGGTGAGCGAAAGCGTTTATGCATTGCCCTTGAGCTGGTCAACAACCCACCTGTCATCTTTCTAGATGAACCTACAA 50 118956 0.745907414 20 48 271 0.947368421 1.857332496 0.065789474 0.42 0.618421053 50 4 0 72 2L:118932-119066 6 25.5 90 FBgn0031220 2984.836667 134.1266667 204.7566667 0.008543181 0.190118793 0.12453807 6 -22 -8 0.15 dme-miR-14-3p 7mer-A1 AGACTGA 2L 119231 119237 - 2L_119231_119237_- 0.823261201 0.823296076 0.823278638 2.47E-05 CG4822 FBtr0100309 117077 119269 2L - 119140 119282 lincRNA_intron-lincRNA_exon CG4822 FlyBase G6315.1 AGTGGATTACTGAATTGCGTTCCCATAAATATTGGTGTAATTCATAGACTGATGTCCTGGACTCACAGTTTACCGTACTAGAAATGATGATTTTGGCGGCAAACTTGAAGTTGGGAAAAGAACTAAATTTAAAACAAAAGCTA 189 119238 0.984613655 23 179 1440 0.947136564 1.48734042 0.348017621 0.169312169 0.308370044 189 6 6 215 2L:119140-119282 7 CG4822 FBtr0100309 117077 119269 AGACTGA 7mer-A1 dme-miR-14-3p 2L - 119140 119255 3'utr CG4822 FlyBase G4932.1 AATATTGGTGTAATTCATAGACTGATGTCCTGGACTCACAGTTTACCGTACTAGAAATGATGATTTTGGCGGCAAACTTGAAGTTGGGAAAAGAACTAAATTTAAAACAAAAGCTA 131 119238 0.921793217 20 123 950 0.921658986 1.397940009 0.313364055 0.419847328 0.649769585 131 10 7 200 2L:119140-119255 7 114.5 91 FBgn0031220 2984.836667 134.1266667 204.7566667 0.038360558 0.85367066 0.559200352 1 1 1 0.15 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2L 11985312 11985317 - 2L_11985312_11985317_- 0.999997155 0.986694844 0.993345999 0.009406217 CG6686 FBtr0301171 11984325 11987330 2L - 11985309 11985357 5'utr CG6686 FlyBase G10173.1 GGCGGGCAACCGTAATGAGGACTCCAATGACATGATGGACTTTGACAAG 17 11985322 0.960565574 4 17 85 1 1.322219295 0.19047619 0.176470588 0.333333333 17 0 0 21 2L:11985309-11985357 6 CG6686 FBtr0301171 11984325 11987330 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2L - 11985256 11985341 5'utr CG6686 FlyBase G7850.1 GAGGACTCCAATGACATGATGGACTTTGACAAGACCGAACAGCCGGAGGAGCATATGGAAACACATACCGATGAGCCTGCCCTGAG 22 11985322 0.961757567 5 21 104 0.971428571 1.531478917 0.2 0.363636364 0.6 22 1 0 34 2L:11985256-11985341 6 16.5 92 FBgn0032388 1118.523333 42.80333333 65.72 0.014751592 0.385483997 0.251065125 5 5 5 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 2L 11985976 11985982 - 2L_11985976_11985982_- 0.521199968 0.521159708 0.521179838 2.85E-05 CG6686 FBtr0301171 11984325 11987330 2L - 11985857 11986018 5'utr CG6686 FlyBase G10176.1 TGAAATGGAAGGTCAGCCGAAAAAGCGCAAGAACTTTGTGATTGGTGAGAATATGGATGAGGAGCGGGAGCACAGACGCAAGCTCCTGGAGATTAAGACCAAATTAGCCGGCAAGCGTTTGGAAACCTTGGAGGACACCAATCTGCAGCTAGCATCGGACAC 302 11985976 0.765601636 18 295 1655 0.979591837 2.049218023 0.131195335 0.11589404 0.221574344 302 5 2 336 2L:11985857-11986018 7 CG6686 FBtr0301171 11984325 11987330 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 11985896 11986011 5'utr CG6686 FlyBase G7852.1 GAAGGTCAGCCGAAAAAGCGCAAGAACTTTGTGATTGGTGAGAATATGGATGAGGAGCGGGAGCACAGACGCAAGCTCCTGGAGATTAAGACCAAATTAGCCGGCAAGCGTTTGGA 181 11985976 0.969730041 13 178 1007 0.988847584 2.123851641 0.130111524 0.342541436 0.557620818 181 2 1 266 2L:11985896-11986011 7 183 93 FBgn0032388 1118.523333 42.80333333 65.72 0.163608567 4.275367962 2.784540475 -6 -6 -6 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 11988953 11988959 - 2L_11988953_11988959_- 0.636149984 0.416331695 0.526240839 0.155435011 zuc FBtr0080316 11988733 11989062 2L - 11988928 11988978 3'utr zuc FlyBase G10182.1 TTAAACTAAAACTTTTTAAGGCAGCTTGATCTTCACACACAAAGGAGTGCC 41 11988953 0.970892376 5 41 240 1 1.716003344 0.057692308 0.195121951 0.365384615 41 0 0 52 2L:11988928-11988978 7 zuc FBtr0080316 11988733 11989062 GGCAGCT 7mer-m8 dme-miR-980-3p 2L - 11988932 11988973 3'utr zuc FlyBase G7858.1 CTAAAACTTTTTAAGGCAGCTTGATCTTCACACACAAAGGAG 26 11988952 0.963710235 5 25 158 0.975609756 1.301029996 0 0.384615385 0.609756098 26 0 1 40 2L:11988932-11988973 7 33.5 94 FBgn0261266 108.3366667 11.63 17.8 0.309221255 2.880481513 1.882022472 -6 -7 -6.5 0.15 dme-miR-1006-3p 6mer2-7 GAATTT 2L 11996408 11996413 + 2L_11996408_11996413_+ 0.998239019 0.999357015 0.998798017 0.000790545 Qtzl FBtr0080288|FBtr0339524 11996242|11996242 11996469|11996723 2L + 11996377 11996451 3'utr Qtzl FlyBase G4156.1 GTCAATTAGGATGAGTGTTTCTAGGCTAAAAGAATTTTCCTTATCCTTCTAAATCCGATACCATATTTATGTAAC 15 11996430 0.956330228 11 14 152 0.882352941 1.176091259 0.058823529 0.133333333 0.235294118 15 2 0 15 2L:11996377-11996451 6 Qtzl FBtr0080288|FBtr0339524 11996242|11996242 11996469|11996723 GAATTT 6mer2-7 dme-miR-1006-3p 2L + 11996382 11996446 3'utr Qtzl FlyBase G3261.1 TTAGGATGAGTGTTTCTAGGCTAAAAGAATTTTCCTTATCCTTCTAAATCCGATACCATATTTAT 19 11996412 0.723687559 11 16 173 0.740740741 1.301029996 0 0.263157895 0.481481481 19 7 0 20 2L:11996382-11996446 6 11 95 FBgn0051864 168.2133333 28.36333333 43.04666667 0.065393152 0.387824656 0.255536627 -22 -4 -13 0.15 dme-miR-79-3p 6mer3-8 TAGCTT 2L 12045461 12045466 - 2L_12045461_12045466_- 0.999680901 0.996853524 0.998267213 0.001999274 CG6770 FBtr0080306 12045341 12045765 2L - 12045405 12045488 3'utr CG6770 FlyBase G10210.1 AAAGAAAGGCACATACTACTCTTAGCTTCTAATATATTCCTAAACTAATTCAGACTTGCAAGTTTTAGTTGCTAAGCCTTAGAG 55 12045467 0.907090788 16 54 414 0.985714286 1.537819095 0.085714286 0.218181818 0.385714286 55 0 1 69 2L:12045405-12045488 6 CG6770 FBtr0080306 12045341 12045765 TAGCTT 6mer3-8 dme-miR-79-3p 2L - 12045410 12045488 3'utr CG6770 FlyBase G7875.2 AAAGAAAGGCACATACTACTCTTAGCTTCTAATATATTCCTAAACTAATTCAGACTTGCAAGTTTTAGTTGCTAAGCCT 35 12045467 0.932264527 12 33 278 0.888888889 1.204119983 0.037037037 0.371428571 0.592592593 35 4 2 48 2L:12045410-12045488 6 26 96 FBgn0032400 867.8766667 144.29 222.0833333 0.029958174 0.180192668 0.117073171 1 1 1 0.15 dme-miR-1006-3p 8mer-A1 CGAATTTA 2L 12045681 12045688 - 2L_12045681_12045688_- 0.671669729 0.67167855 0.671674139 6.29E-06 CG6770 FBtr0080306 12045341 12045765 2L - 12045668 12045787 stop_codon CG6770 FlyBase G10211.2 AGCCGCCGCCTGCAAGAACTGATGCAGGGCATCGACGGAGGCGGTGGAACAGGAGAGAAAGAAGTAACGGGGCCGCGCTGAAAGGAGAAAAGAAATCTTCGAATTTAAAAGGAAAGCAAA 122 12045689 0.979955211 8 116 547 0.951048951 2.133538908 0.181818182 0.163934426 0.286713287 122 7 0 136 2L:12045668-12045787 8 CG6770 FBtr0080306 12045341 12045765 CGAATTTA 8mer-A1 dme-miR-1006-3p 2L - 12045670 12045740 3'utr CG6770 FlyBase G7878.1 AACAGGAGAGAAAGAAGTAACGGGGCCGCGCTGAAAGGAGAAAAGAAATCTTCGAATTTAAAAGGAAAGCA 67 12045689 0.959389796 5 65 316 0.97826087 1.954242509 0.097826087 0.268656716 0.467391304 67 2 0 90 2L:12045670-12045740 8 84.5 97 FBgn0032400 867.8766667 144.29 222.0833333 0.097364065 0.58562617 0.380487805 1 1 1 0.15 dme-miR-999-3p 8mer-A1 AGTTAACA 2L 12051995 12052002 - 2L_12051995_12052002_- 0.643926235 0.478644775 0.561285505 0.116871599 JhI-21 FBtr0305089|FBtr0342608|FBtr0346427|FBtr0089655|FBtr0089656 12051753|12051753|12051753|12051753|12051753 12052229|12052229|12052229|12052229|12052229 2L - 12051948 12052020 3'utr JhI-21 FlyBase G10216.1 TTTTTTAGCGATCCCCTCAGTTAACAGGTTTTTGCAAAACCCCCGCCTTTTTGGCCCACTTCCCACAAAAGTT 18 12052005 0.962218537 8 15 119 0.833333333 0.698970004 0.166666667 0 0 18 1 2 15 2L:12051948-12052020 8 JhI-21 FBtr0089656|FBtr0346427|FBtr0089655|FBtr0305089|FBtr0342608 12051753|12051753|12051753|12051753|12051753 12052229|12052229|12052229|12052229|12052229 AGTTAACA 8mer-A1 dme-miR-999-3p 2L - 12051956 12052020 3'utr JhI-21 FlyBase G7882.1 TTTTTTAGCGATCCCCTCAGTTAACAGGTTTTTGCAAAACCCCCGCCTTTTTGGCCCACTTCCCA 8 12051973 0.969920619 7 8 53 1 1.041392685 0.181818182 0.375 0.545454545 8 0 0 11 2L:12051956-12052020 8 8.5 98 FBgn0028425 1112.883333 63.32333333 95.85666667 0.007637818 0.134231721 0.088674062 3 -29 -13 0.15 dme-bantam-3p 6mer3-8 TGATCT 2L 12100649 12100654 + 2L_12100649_12100654_+ 0.991298677 0.510830346 0.751064511 0.339742464 Ced-12 FBtr0080330 12100540 12100839 2L + 12100627 12100697 3'utr Ced-12 FlyBase G4189.1 AACATAATCGTATTCTCCGATCTGATCTTCTACTAGTATTACTTGTGCAATTCCCCGAACACAAAATGAAC 38 12100649 0.989470837 11 37 354 0.977777778 1.643452676 0.2 0.184210526 0.311111111 38 1 0 44 2L:12100627-12100697 6 Ced-12 FBtr0080330 12100540 12100839 TGATCT 6mer3-8 dme-bantam-3p 2L + 12100627 12100693 3'utr Ced-12 FlyBase G3274.1 AACATAATCGTATTCTCCGATCTGATCTTCTACTAGTATTACTTGTGCAATTCCCCGAACACAAAAT 28 12100649 0.989335581 12 24 238 0.846153846 1.51851394 0.384615385 0.392857143 0.564102564 28 6 0 33 2L:12100627-12100693 6 24.5 99 FBgn0032409 609.2533333 28.43666667 43.38333333 0.040213157 0.861563709 0.564733 0 0 0 0.15 dme-bantam-3p 7mer-m8 TGATCTC 2L 12100792 12100798 - 2L_12100792_12100798_- 0.66158727 0.661566319 0.661576794 1.48E-05 Patsas FBtr0080362 12100763 12101247 2L - 12100777 12100819 3'utr Patsas FlyBase G10238.1 TGTATAAAATGTGTTATTTAATGATCTCTATATATTATATACC 15 12100798 0.929621022 6 13 180 0.894736842 1.230448921 0.684210526 0.266666667 0.421052632 15 2 0 17 2L:12100777-12100819 7 Patsas FBtr0080362 12100763 12101247 TGATCTC 7mer-m8 dme-bantam-3p 2L - 12100782 12100818 3'utr Patsas FlyBase G7899.1 GTATAAAATGTGTTATTTAATGATCTCTATATATTAT 10 12100791 0.887344079 5 9 113 0.933333333 1.146128036 0.6 0.4 0.6 10 1 0 14 2L:12100782-12100818 7 12.5 100 FBgn0029137 12.51333333 0.613333333 0.946666667 0.99893447 20.38043478 13.20422535 0 -7 -3.5 0.15 dme-miR-970-3p 8mer-A1 TCTTATGA 2L 12107479 12107486 - 2L_12107479_12107486_- 0.630783819 0.630790218 0.630787019 4.53E-06 Rab6 FBtr0346437|FBtr0080361 12107219|12107285 12108172|12108172 2L - 12107475 12107540 3'utr Rab6 FlyBase G10239.1 GCGAACGCGACTGCTAACTGGAACTGTGGATGGCATAGGACTTGGCCACGTGCATCTTATGAATAA 10 12107498 0.938815867 6 9 54 0.9 0.954242509 0.4 0 0 10 1 0 9 2L:12107475-12107540 8 Rab6 FBtr0346437|FBtr0080361 12107219|12107285 12108172|12108172 TCTTATGA 8mer-A1 dme-miR-970-3p 2L - 12107470 12107548 3'utr Rab6 FlyBase G7901.1 TTAGCACAGCGAACGCGACTGCTAACTGGAACTGTGGATGGCATAGGACTTGGCCACGTGCATCTTATGAATAAATATA 10 12107516 0.963745132 8 10 55 1 1.079181246 0.083333333 0.2 0.333333333 10 0 0 12 2L:12107470-12107548 8 3 101 FBgn0015797 1477.666667 97.91333333 149.3266667 0.002030228 0.030639341 0.020090183 12 30 21 0.15 dme-miR-317-3p 8mer-A1 TGTGTTCA 2L 12107651 12107658 - 2L_12107651_12107658_- 0.631130088 0.631129083 0.631129585 7.07E-07 Rab6 FBtr0346437|FBtr0080361 12107219|12107285 12108172|12108172 2L - 12107636 12107688 3'utr Rab6 FlyBase G10240.1 CCAGCAGTCGTAGATACCACGCAGCCAGTCTGTGTTCAATGATTCCACCAGCC 63 12107659 0.828854345 9 58 416 0.943661972 1.826074803 0.183098592 0.111111111 0.211267606 63 4 0 67 2L:12107636-12107688 8 Rab6 FBtr0346437|FBtr0080361 12107219|12107285 12108172|12108172 TGTGTTCA 8mer-A1 dme-miR-317-3p 2L - 12107626 12107690 3'utr Rab6 FlyBase G7902.1 CTCCAGCAGTCGTAGATACCACGCAGCCAGTCTGTGTTCAATGATTCCACCAGCCAGGCATTTTG 26 12107659 0.97817345 8 24 159 0.941176471 1.505149978 0.205882353 0.269230769 0.441176471 26 2 0 32 2L:12107626-12107690 8 38 102 FBgn0015797 1477.666667 97.91333333 149.3266667 0.025716219 0.388098318 0.254475646 1 1 1 0.15 dme-miR-252-5p 7mer-m8 GTACTTA 2L 12107740 12107746 - 2L_12107740_12107746_- 0.52392799 0.542237786 0.533082888 0.012946984 Rab6 FBtr0346437|FBtr0080361 12107219|12107285 12108172|12108172 2L - 12107713 12107763 3'utr Rab6 FlyBase G10241.1 AAAAAACCCAAGACCATGTACTTATGTCAGGCCAGGCGGTCCCAGGATCCT 18 12107747 0.958349405 3 17 84 1 1.255272505 0.055555556 0 0 18 0 0 18 2L:12107713-12107763 7 Rab6 FBtr0346437|FBtr0080361 12107219|12107285 12108172|12108172 GTACTTA 7mer-m8 dme-miR-252-5p 2L - 12107718 12107762 3'utr Rab6 FlyBase G7903.1 AAAAACCCAAGACCATGTACTTATGTCAGGCCAGGCGGTCCCAGG 13 12107747 0.966781849 2 12 64 0.944444444 1.230448921 0 0.384615385 0.555555556 13 1 0 17 2L:12107718-12107762 7 14.5 103 FBgn0015797 1477.666667 97.91333333 149.3266667 0.009812768 0.148090148 0.097102549 1 1 1 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2L 12171289 12171294 - 2L_12171289_12171294_- 0.509688463 0.785231536 0.64746 0.194838324 CG6583 FBtr0080358 12171202 12171697 2L - 12171234 12171333 3'utr CG6583 FlyBase G10249.1 CCGAAAATGCTTACGTTTGACATATTTATTACTAGTATTTACCTGCCATATCCGAATAACCACTACCATATCGAAAAACCAGTAAATTGTACACACAGAA 20 12171295 0.986393499 6 17 144 0.923076923 1.079181246 0.038461538 0.3 0.461538462 20 1 1 24 2L:12171234-12171333 6 CG6583 FBtr0080358 12171202 12171697 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2L - 12171248 12171336 3'utr CG6583 FlyBase G7909.1 ATTCCGAAAATGCTTACGTTTGACATATTTATTACTAGTATTTACCTGCCATATCCGAATAACCACTACCATATCGAAAAACCAGTAAA 17 12171296 0.983026609 9 17 134 1 1.342422681 0.045454545 0.176470588 0.363636364 17 0 0 22 2L:12171248-12171336 6 12.5 104 FBgn0032420 73.66666667 8.476666667 12.93333333 0.169683258 1.474636256 0.966494845 1 2 1.5 0.15 dme-miR-184-3p 8mer-A1 TCCGTCCA 2L 12173897 12173904 + 2L_12173897_12173904_+ 0.631128268 0.631128437 0.631128353 7.07E-08 crok FBtr0080342 12173602 12174091 2L + 12173829 12173970 3'utr crok FlyBase G4207.1 GAGCGATGTGTAATCAAGTGCCTTTTCTGTAACGGACTCGTATTGTAACTTAAGCCTGGAATACTATTTCCGTCCAAAAAATATCTTACGCCTATGACATTCCATCTCGTAAACTGAATCTTGTAATACTTTCTATTTTCTA 765 12173896 0.979153126 20 743 5110 0.973952435 2.633468456 0.005662514 0.130718954 0.246885617 765 22 1 860 2L:12173829-12173970 8 crok FBtr0080342 12173602 12174091 TCCGTCCA 8mer-A1 dme-miR-184-3p 2L + 12173828 12173960 3'utr crok FlyBase G3289.1 TGAGCGATGTGTAATCAAGTGCCTTTTCTGTAACGGACTCGTATTGTAACTTAAGCCTGGAATACTATTTCCGTCCAAAAAATATCTTACGCCTATGACATTCCATCTCGTAAACTGAATCTTGTAATACTTT 477 12173896 0.978275238 23 460 3084 0.958333333 2.139879086 0.005555556 0.368972746 0.581944444 477 26 4 690 2L:12173828-12173960 8 568.5 105 FBgn0032421 76 9.133333333 13.88666667 7.480263158 62.24452555 40.93855017 1 1 1 0.15 dme-miR-932-5p 6mer3-8 GGAATT 2L 122680 122685 - 2L_122680_122685_- 0.59167961 0.532902679 0.562291144 0.041561545 CG3164 FBtr0078153|FBtr0078155|FBtr0100379|FBtr0078154 122622|122622|122622|122622 123128|123128|123128|123128 2L - 122668 122710 3'utr CG3164 FlyBase G6327.1 TATTCAAGGTACTTTAAGACCCTTTGGAATTTTTTGTAATATT 11 122687 0.755698906 5 10 90 1 1.230448921 0 0.363636364 0.588235294 11 0 0 17 2L:122668-122710 6 CG3164 FBtr0100379|FBtr0078154|FBtr0078153|FBtr0078155 122622|122622|122622|122622 123128|123128|123128|123128 GGAATT 6mer3-8 dme-miR-932-5p 2L - 122639 122703 3'utr CG3164 FlyBase G4943.1 GGTACTTTAAGACCCTTTGGAATTTTTTGTAATATTTTCTTATTACAGGTTTAGAATAAACATTT 17 122678 0.819502112 10 15 162 0.863636364 0.67669361 0.090909091 0.294117647 0.454545455 17 0 3 19 2L:122639-122703 6 9 106 FBgn0025683 1716.21 73.79 112.3166667 0.005244113 0.121967746 0.080130583 2 -7 -2.5 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2L 12403483 12403489 - 2L_12403483_12403489_- 0.822694288 0.82229843 0.822496359 0.000279944 vir-1 FBtr0100125|FBtr0334761|FBtr0080390|FBtr0080389|FBtr0305263 12403268|12403268|12403268|12403268|12403268 12403580|12403580|12403580|12403580|12403580 2L - 12403453 12403525 3'utr vir-1 FlyBase G10254.1 GCTTGTAAACATAAAACGAGGATATCTCTGAGAGATCCAAAGAAATCGGCGCTCATTTCATCCGTAATTTATC 24 12403497 0.817183334 5 22 114 0.933333333 1.447158031 0.1 0.208333333 0.366666667 24 2 0 28 2L:12403453-12403525 7 vir-1 FBtr0305263|FBtr0080389|FBtr0080390|FBtr0334761|FBtr0100125 12403268|12403268|12403268|12403268|12403268 12403580|12403580|12403580|12403580|12403580 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 12403457 12403513 3'utr vir-1 FlyBase G7914.1 AAAACGAGGATATCTCTGAGAGATCCAAAGAAATCGGCGCTCATTTCATCCGTAATT 24 12403497 0.730113815 8 21 110 0.857142857 0.77815125 0.142857143 0.333333333 0.542857143 24 1 4 30 2L:12403457-12403513 7 16.5 107 FBgn0043841 3920.323333 419.3833333 639.8233333 0.004208837 0.039343481 0.025788369 8 8 8 0.15 dme-miR-277-3p 6mer2-7 GCATTT 2L 12403547 12403552 - 2L_12403547_12403552_- 0.993945402 0.946969211 0.970457307 0.03321719 vir-1 FBtr0100125|FBtr0334761|FBtr0080390|FBtr0080389|FBtr0305263 12403268|12403268|12403268|12403268|12403268 12403580|12403580|12403580|12403580|12403580 2L - 12403539 12403756 stop_codon vir-1 FlyBase G10255.1 ATATCGAGGAGAACTTTGTGCCCATTGACCTATCCAACGATATAGCCGTCAACGATTTGGCTGCCGCAGATCCCAATTTTCCCATCAATGAAGATGCCGAGTTCATTGTGCACCCAGCTGTAATCAGAACTATGCCTATGTTCGAGAAGCTTTCTTTAGGAGAGCCTGCGAAATGAGGTTTCTAAGTCTCTCCCACTAGTCTAGGCATTTTCTTTTAG 70 12403555 0.978626008 31 63 423 0.91025641 1.851258349 0.192307692 0.1 0.192307692 70 7 0 71 2L:12403539-12403756 6 vir-1 FBtr0305263|FBtr0080389|FBtr0080390|FBtr0334761|FBtr0100125 12403268|12403268|12403268|12403268|12403268 12403580|12403580|12403580|12403580|12403580 GCATTT 6mer2-7 dme-miR-277-3p 2L - 12403546 12403665 stop_codon vir-1 FlyBase G7915.1 AGATGCCGAGTTCATTGTGCACCCAGCTGTAATCAGAACTATGCCTATGTTCGAGAAGCTTTCTTTAGGAGAGCCTGCGAAATGAGGTTTCTAAGTCTCTCCCACTAGTCTAGGCATTTT 26 12403555 0.977444407 14 26 171 1 1.612783857 0.341463415 0.461538462 0.658536585 26 0 0 41 2L:12403546-12403665 6 16 108 FBgn0043841 3920.323333 419.3833333 639.8233333 0.004081296 0.038151254 0.025006903 3 3 3 0.15 dme-miR-1003-3p 6mer2-7 TGTGAG 2L 12426966 12426971 - 2L_12426966_12426971_- 0.999921807 0.999424604 0.999673205 0.000351573 CG5446 FBtr0080388|FBtr0333093|FBtr0333094 12426898|12426898|12426629 12427225|12427225|12427225 2L - 12426938 12426988 3'utr CG5446 FlyBase G10266.1 AAGTAAAGTAATTCTTTTGTGAGCAATGGCCAATAATTTTGAATTATTGCC 11 12426973 0.986215474 5 10 86 0.916666667 0.740362689 0 0.090909091 0.166666667 11 0 1 11 2L:12426938-12426988 6 CG5446 FBtr0333094|FBtr0080388|FBtr0333093 12426629|12426898|12426898 12427225|12427225|12427225 TGTGAG 6mer2-7 dme-miR-1003-3p 2L - 12426949 12426982 3'utr CG5446 FlyBase G7925.1 AGTAATTCTTTTGTGAGCAATGGCCAATAATTTT 5 12426972 0.643184605 3 5 44 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2L:12426949-12426982 6 7.5 109 FBgn0032429 186 33.08333333 50.87 0.040322581 0.226700252 0.147434637 2 1 1.5 0.15 dme-miR-277-3p 6mer3-8 TGCATT 2L 12439867 12439872 + 2L_12439867_12439872_+ 0.902633241 0.919842931 0.911238086 0.012169096 Elf FBtr0333089|FBtr0080369|FBtr0344859|FBtr0333090 12439563|12439563|12439563|12439563 12441279|12440602|12440602|12440602 2L + 12439793 12439890 3'utr Elf FlyBase G4233.1 CGGAACGGAACGGCAATGTAGGCAGGCGAAAAGTTAATTTACAACAAGGACGAGTTCGGAGATAGAAACAGAAATGCATTATATACGAATTATAAACT 42 12439871 0.958182844 9 40 195 0.978723404 1.662757832 0.085106383 0.119047619 0.212765957 42 1 0 46 2L:12439793-12439890 6 Elf FBtr0344859|FBtr0333090|FBtr0333089|FBtr0080369 12439563|12439563|12439563|12439563 12440602|12440602|12441279|12440602 TGCATT 6mer3-8 dme-miR-277-3p 2L + 12439838 12439876 3'utr Elf FlyBase G3312.1 AAGGACGAGTTCGGAGATAGAAACAGAAATGCATTATAT 18 12439871 0.69487766 5 16 91 0.916666667 1.342422681 0 0.333333333 0.5 18 2 0 22 2L:12439838-12439876 6 24.5 110 FBgn0020443 5168.45 195.0133333 300.5566667 0.004740299 0.125632435 0.08151541 -4 -4 -4 0.15 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA 2L 12440009 12440016 + 2L_12440009_12440016_+ 0.615589168 0.615230225 0.615409697 0.000253851 Elf FBtr0333089|FBtr0080369|FBtr0344859|FBtr0333090 12439563|12439563|12439563|12439563 12441279|12440602|12440602|12440602 2L + 12439984 12440026 3'utr Elf FlyBase G4234.1 TATATATGCAAAGAGAGAGAAAGAGTTGAAGAAGAGGAGTTGC 14 12440009 0.848260403 4 12 29 0.85 1.230448921 0.45 0.285714286 0.5 14 3 0 17 2L:12439984-12440026 8 Elf FBtr0344859|FBtr0333090|FBtr0333089|FBtr0080369 12439563|12439563|12439563|12439563 12440602|12440602|12441279|12440602 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p 2L + 12439981 12440027 3'utr Elf FlyBase G3313.1 ACGTATATATGCAAAGAGAGAGAAAGAGTTGAAGAAGAGGAGTTGCA 9 12440009 0.755924404 3 8 20 0.923076923 0.77815125 0.461538462 0.444444444 0.615384615 9 0 1 12 2L:12439981-12440027 8 10 111 FBgn0020443 5168.45 195.0133333 300.5566667 0.001934816 0.051278545 0.033271596 0 0 0 0.15 dme-miR-968-5p 7mer-A1 CTACTTA 2L 12440481 12440487 + 2L_12440481_12440487_+ 0.421866871 0.398626654 0.410246762 0.016433303 Elf FBtr0333089|FBtr0080369|FBtr0344859|FBtr0333090 12439563|12439563|12439563|12439563 12441279|12440602|12440602|12440602 2L + 12440460 12440491 3'utr Elf FlyBase G4236.1 ATTTAAAACCATTTGATTTTGCTACTTAAAAC 6 12440479 0.956390759 3 6 51 1 0.903089987 0 0.166666667 0.375 6 0 0 8 2L:12440460-12440491 7 Elf FBtr0344859|FBtr0333090|FBtr0333089|FBtr0080369 12439563|12439563|12439563|12439563 12440602|12440602|12441279|12440602 CTACTTA 7mer-A1 dme-miR-968-5p 2L + 12440464 12440498 3'utr Elf FlyBase G3315.1 AAAACCATTTGATTTTGCTACTTAAAACACATTTG 5 12440479 0.976572703 2 4 39 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 2L:12440464-12440498 7 5.5 112 FBgn0020443 5168.45 195.0133333 300.5566667 0.001064149 0.0282032 0.018299378 2 2 2 0.15 dme-miR-970-3p 8mer-A1 TCTTATGA 2L 12452005 12452012 - 2L_12452005_12452012_- 0.630790015 0.630790193 0.630790104 1.41E-07 CG5418 FBtr0080382 12451943 12452060 2L - 12451966 12452021 3'utr CG5418 FlyBase G10276.1 TTTAATTGTTCTTATGATTTGTCTTGGCACATTGGATCGATCTTAAGTTTACGAAT 10 12452012 0.9944873 6 9 113 0.833333333 1 0.083333333 0.2 0.333333333 10 2 0 10 2L:12451966-12452021 8 CG5418 FBtr0080382 12451943 12452060 TCTTATGA 8mer-A1 dme-miR-970-3p 2L - 12451972 12452029 3'utr CG5418 FlyBase G7931.1 AGAATAACTTTAATTGTTCTTATGATTTGTCTTGGCACATTGGATCGATCTTAAGTTT 8 12452010 0.988322705 7 8 81 1 1 0.3 0.125 0.3 8 0 0 10 2L:12451972-12452029 8 5.5 113 FBgn0032436 3.666666667 0.376666667 0.583333333 1.5 14.60176991 9.428571429 0 -2 -1 0.15 dme-miR-12-5p 6mer2-7 ATACTC 2L 12455886 12455891 - 2L_12455886_12455891_- 0.964587782 0.981170892 0.972879337 0.011726022 bun FBtr0339528|FBtr0300523|FBtr0299652 12455538|12455538|12455538 12457755|12457755|12457755 2L - 12455650 12455934 3'utr bun FlyBase G10281.2 GAAAATTATCATCCAAAATGAAAAGGGATTAAAACCAAATATGATACTCCAACTCCAAGTGCCGAAAACTAGCTGTCTACAGGGCAAACACCAATGGACAGACAAATCAGATAGACGGACGGACAGGACAGACTAATGTCACATCCCCCGAACACAGTAATTCTGTTGAAAAGTATTTCCCTTTATGATTTTTGTATTCAATTCAGAGAACCATCTTCATGCGTTTCATGTTTAGTTCTTCTCCTATGAGTTTTACGACTTAAGCCTCTTTTTAAGCTAACTATT 150 12455893 0.986153183 28 145 814 0.966850829 2.243038049 0.082872928 0.173333333 0.314917127 150 6 0 175 2L:12455650-12455934 6 bun FBtr0299652|FBtr0300523|FBtr0339528 12455538|12455538|12455538 12457755|12457755|12457755 ATACTC 6mer2-7 dme-miR-12-5p 2L - 12455845 12455994 3'utr bun FlyBase G7938.1 AGAACACAAAATGCAGCCTGCGGAGACGCAAATTGTCTAAGGCTAGCGTGGATTAAACAAGAAAATTATCATCCAAAATGAAAAGGGATTAAAACCAAATATGATACTCCAACTCCAAGTGCCGAAAACTAGCTGTCTACAGGGCAAACA 68 12455893 0.953924569 12 62 283 0.934065934 1.929418926 0.021978022 0.25 0.43956044 68 6 0 85 2L:12455845-12455994 6 65.5 114 FBgn0259176 10573.67 421.1233333 647.0833333 0.006194633 0.155536383 0.101223439 2 2 2 0.15 dme-miR-980-5p 7mer-m1 AAAAACT 2L 12456500 12456506 - 2L_12456500_12456506_- 0.763598686 0.740905065 0.752251876 0.016046798 bun FBtr0339528|FBtr0300523|FBtr0299652 12455538|12455538|12455538 12457755|12457755|12457755 2L - 12456494 12456538 3'utr bun FlyBase G10285.1 AGAAAGCTTATCAAAATTGTTTGTTAAACTCTAAAAACTATCTGC 5 12456517 0.987093955 4 5 39 1 0.698970004 0 0 0 5 0 0 5 2L:12456494-12456538 7 bun FBtr0299652|FBtr0300523|FBtr0339528 12455538|12455538|12455538 12457755|12457755|12457755 AAAAACT 7mer-m1 dme-miR-980-5p 2L - 12456445 12456538 3'utr bun FlyBase G7943.1 AGAAAGCTTATCAAAATTGTTTGTTAAACTCTAAAAACTATCTGCAAACAAAAAACCCAAAAATATCTGTAAATATTGTGTAAAACTAAAAACT 11 12456498 0.98448074 8 8 64 0.684210526 1.113943352 0 0.545454545 0.736842105 11 6 0 13 2L:12456445-12456538 7 3.5 115 FBgn0259176 10573.67 421.1233333 647.0833333 0.000331011 0.008311104 0.005408886 11 -8 1.5 0.15 dme-miR-988-3p 8mer-m1 ACAAGGGG 2L 12456705 12456712 - 2L_12456705_12456712_- 0.628080572 0.62792003 0.628000301 0.000113561 bun FBtr0339528|FBtr0299658|FBtr0346622|FBtr0300523|FBtr0300522|FBtr0299652|FBtr0300524|FBtr0299656 12455538|12456575|12456575|12455538|12456575|12455538|12456575|12456575 12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755 2L - 12456644 12456738 3'utr bun FlyBase G10287.1 TTAATCCTAACTTTTATTGTAAAAATACAAGGGGAAATATTAACTACATCATAAATATGAATATGTTTCAAATTAAACAATGGATAACAAAAAAA 88 12456713 0.965473444 13 80 418 0.95412844 2.017033339 0.027522936 0.215909091 0.366972477 88 5 0 104 2L:12456644-12456738 8 bun FBtr0300524|FBtr0299656|FBtr0300522|FBtr0299652|FBtr0346622|FBtr0300523|FBtr0339528|FBtr0299658 12456575|12456575|12456575|12455538|12456575|12455538|12455538|12456575 12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755 ACAAGGGG 8mer-m1 dme-miR-988-3p 2L - 12456647 12456735 3'utr bun FlyBase G7945.1 ATCCTAACTTTTATTGTAAAAATACAAGGGGAAATATTAACTACATCATAAATATGAATATGTTTCAAATTAAACAATGGATAACAAAA 59 12456713 0.973930095 10 53 322 0.916666667 1.58546073 0.05952381 0.355932203 0.547619048 59 6 1 77 2L:12456647-12456735 8 67 116 FBgn0259176 10573.67 421.1233333 647.0833333 0.006336494 0.159098285 0.103541533 1 1 1 0.15 dme-miR-14-3p 6mer2-7 AGACTG 2L 12457318 12457323 - 2L_12457318_12457323_- 0.921458817 0.921452521 0.921455669 4.45E-06 bun FBtr0339528|FBtr0299658|FBtr0299657|FBtr0346622|FBtr0300523|FBtr0300521|FBtr0300522|FBtr0299652|FBtr0300524|FBtr0299656 12455538|12456575|12457136|12456575|12455538|12456885|12456575|12455538|12456575|12456575 12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755 2L - 12457211 12457561 5'utr bun FlyBase G10290.1 AGCAATAGCAGCGCAGCGGCAGGCAGACTCACCCAAACATGTTAAGTTCGTGTTAGGTAGACTAGCCTGCTGTTAAGAATTGTTATGTTGTTGCTGGCTGTTAATCTGCTGCAGCCGCCGTTTTGTTAATTTCTCGATTGTGATATTTGTTTAACACACATACAGACCACCACACACACACACACTCATACGCATTTACACACACATCCATACGAAATACACACACAAACACACAGATAGACTGCACGCTAACAGCGGCTGCGGCTGGCGCTGTTAACGTCCGCTGTTAACTCGAAGCGAGTATAGGAGTTCTTTTAAATATCGCGCTGCTGCGCCTCCACATTTTTGTTT 3062 12457324 0.994606079 68 2920 18402 0.95735901 1.77815125 0.049793673 0.153494448 0.2869326 3062 98 57 3480 2L:12457211-12457561 6 bun FBtr0300524|FBtr0299656|FBtr0300522|FBtr0299652|FBtr0299657|FBtr0346622|FBtr0300523|FBtr0300521|FBtr0339528|FBtr0299658 12456575|12456575|12456575|12455538|12457136|12456575|12455538|12456885|12455538|12456575 12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755 AGACTG 6mer2-7 dme-miR-14-3p 2L - 12457257 12457395 5'utr bun FlyBase G7948.1 CCACCACACACACACACACTCATACGCATTTACACACACATCCATACGAAATACACACACAAACACACAGATAGACTGCACGCTAACAGCGGCTGCGGCTGGCGCTGTTAACGTCCGCTGTTAACTCGAAGCGAGTATA 965 12457324 0.98266962 17 922 2062 0.965362412 2.098355254 0.030788967 0.421761658 0.642078255 965 43 11 1505 2L:12457257-12457395 6 1273.5 117 FBgn0259176 10573.67 421.1233333 647.0833333 0.12044068 3.024054711 1.968061816 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 12708635 12708640 + 2L_12708635_12708640_+ 0.999825618 0.999999991 0.999912804 0.000123319 CG6180 FBtr0080398|FBtr0080398|FBtr0080398 12708543|12708543|12708543 12708680|12708680|12708680 2L + 12708558 12708658 3'utr CG6180 FlyBase G4258.1 AACCATGCTTATATAAGCCAGTCTGAATTGGATTCAAATCTATTGTAACCTAGAAATTAAAGACACCTATGAACACTCTGTGAAACCCTCTGTTGCTGGCA 130 12708634 0.763928041 15 117 729 0.896774194 1.540954809 0.24516129 0.184615385 0.316129032 130 13 3 139 2L:12708558-12708658 6 CG6180 FBtr0080398|FBtr0080398|FBtr0080398 12708543|12708543|12708543 12708680|12708680|12708680 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 12708550 12708662 3'utr CG6180 FlyBase G3331.1 ACGCCAAAAACCATGCTTATATAAGCCAGTCTGAATTGGATTCAAATCTATTGTAACCTAGAAATTAAAGACACCTATGAACACTCTGTGAAACCCTCTGTTGCTGGCAATAA 62 12708633 0.961440018 17 59 339 0.955555556 1.633468456 0.144444444 0.274193548 0.5 62 3 1 86 2L:12708550-12708662 6 69 118 FBgn0032453 1365.473333 166.0266667 253.2533333 0.050531928 0.415595888 0.272454459 1 2 1.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 12713306 12713313 - 2L_12713306_12713313_- 0.330447181 0.320533361 0.325490271 0.007010115 Pih1D1 FBtr0089908|FBtr0089908|FBtr0089908 12713274|12713274|12713274 12713339|12713339|12713339 2L - 12713276 12713327 3'utr Pih1D1 FlyBase G10347.1 ATGAATAATGCCCGCTGTGATAATGTTAATAAAGGCGCAAATTTTACAATTT 35 12713319 0.977756556 6 33 220 0.959183673 1.672097858 0.204081633 0.285714286 0.489795918 35 2 0 47 2L:12713276-12713327 8 Pih1D1 FBtr0089908|FBtr0089908|FBtr0089908 12713274|12713274|12713274 12713339|12713339|12713339 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 12713276 12713327 3'utr Pih1D1 FlyBase G8000.1 ATGAATAATGCCCGCTGTGATAATGTTAATAAAGGCGCAAATTTTACAATTT 30 12713319 0.763971088 8 25 189 0.891304348 1.612783857 0.130434783 0.366666667 0.586956522 30 5 0 41 2L:12713276-12713327 8 31.5 119 FBgn0032455 841.0766667 43.54 66.97 0.037451996 0.723472669 0.470359863 6 6 6 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 12744636 12744643 + 2L_12744636_12744643_+ 0.499974889 0.500064288 0.500019589 6.32E-05 MRP FBtr0090014|FBtr0090013|FBtr0090027|FBtr0090022|FBtr0090024|FBtr0090028|FBtr0090017|FBtr0090026|FBtr0090020|FBtr0090016|FBtr0090021|FBtr0090029|FBtr0090015|FBtr0090023|FBtr0090025|FBtr0090019|FBtr0090018 12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170 12744806|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807 2L + 12744614 12744771 3'utr MRP FlyBase G4271.1 CTTATGTATGCCACATATTTATGTACTTAAATTAACAAATCAGAAGATTGAGATACTACTTAAACTCCCTCAAGAATTTTTGCCTTCAACTGATAAGATCAGTACGAAAAACGGTCAATGTAGTTAAATCAATTTATTGAAACTTTTGTAGATTGTAT 56 12744635 0.854623124 15 52 464 0.935483871 1.462397998 0.064516129 0.107142857 0.193548387 56 3 1 58 2L:12744614-12744771 8 MRP FBtr0090015|FBtr0090023|FBtr0090026|FBtr0090019|FBtr0090018|FBtr0090016|FBtr0090020|FBtr0090029|FBtr0090021|FBtr0090025|FBtr0090014|FBtr0090028|FBtr0090027|FBtr0090017|FBtr0090024|FBtr0090013|FBtr0090022 12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170 12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744806|12744807|12744807|12744807|12744807|12744807|12744807 GTACTTAA 8mer-A1 dme-miR-252-5p 2L + 12744620 12744653 3'utr MRP FlyBase G3341.1 TATGCCACATATTTATGTACTTAAATTAACAAAT 13 12744634 0.690525964 3 12 122 0.888888889 1.204119983 0 0.307692308 0.5 13 2 0 16 2L:12744620-12744653 8 22 120 FBgn0032456 4513.983333 98.30333333 150.4066667 0.004873744 0.223797091 0.146270112 1 2 1.5 0.15 dme-miR-33-5p 6mer2-7 AATGCA 2L 12817079 12817084 - 2L_12817079_12817084_- 1 0.999982157 0.999991078 1.26E-05 kek1 FBtr0332210 12816998 12819017 2L - 12817051 12817098 3'utr kek1 FlyBase G10356.1 AAAGGCGGGCATTGAATGCATGAAAGCAACTGAATGAACAACAAAGCA 7 12817085 0.914460605 5 6 20 0.857142857 0.77815125 0 0 0 7 1 0 6 2L:12817051-12817098 6 kek1 FBtr0332210 12816998 12819017 AATGCA 6mer2-7 dme-miR-33-5p 2L - 12817052 12817097 3'utr kek1 FlyBase G8009.1 AAGGCGGGCATTGAATGCATGAAAGCAACTGAATGAACAACAAAGC 6 12817085 0.882899209 3 5 14 0.857142857 0.77815125 0.285714286 0.166666667 0.285714286 6 1 0 6 2L:12817052-12817097 6 4.5 121 FBgn0015399 5185.06 109.4633333 168.6866667 0.000867878 0.041109656 0.026676679 1 1 1 0.15 dme-miR-277-3p 7mer-A1 GCATTTA 2L 12817260 12817266 - 2L_12817260_12817266_- 0.822030003 0.82165044 0.821840221 0.000268418 kek1 FBtr0332210 12816998 12819017 2L - 12817247 12817290 3'utr kek1 FlyBase G10358.1 AAAAAAGAGCAAGAAAAAACCGTAGCATTTAAGTTGAACTTATG 6 12817268 0.962192479 3 5 24 0.833333333 0.698970004 0.166666667 0 0 6 1 0 5 2L:12817247-12817290 7 kek1 FBtr0332210 12816998 12819017 GCATTTA 7mer-A1 dme-miR-277-3p 2L - 12817233 12817286 3'utr kek1 FlyBase G8011.1 AAGAGCAAGAAAAAACCGTAGCATTTAAGTTGAACTTATGTATTATGTATTGTA 7 12817265 0.986867539 5 6 56 0.875 0.84509804 0.125 0.142857143 0.25 7 1 0 7 2L:12817233-12817286 7 6 122 FBgn0015399 5185.06 109.4633333 168.6866667 0.001157171 0.054812875 0.035568905 2 -1 0.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 12818801 12818807 - 2L_12818801_12818807_- 0.798909871 0.800272391 0.799591131 0.000963433 kek1 FBtr0332210|FBtr0332210|FBtr0332210 12816998|12816998|12816998 12819017|12819017|12819017 2L - 12818785 12818864 3'utr kek1 FlyBase G10362.1 CTGATAGATAGCTCCGGGGTCCTAGGCGAGCAGCGATTATTGTGCAAGCGAACTGTTTGTGATAGTGTCTGACAAAAAGA 53 12818809 0.96985266 9 49 356 0.972972973 1.380211242 0.216216216 0.301886792 0.5 53 0 2 72 2L:12818785-12818864 7 kek1 FBtr0332210|FBtr0332210|FBtr0332210 12816998|12816998|12816998 12819017|12819017|12819017 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 12818743 12818843 3'utr kek1 FlyBase G8013.1 CTAGGCGAGCAGCGATTATTGTGCAAGCGAACTGTTTGTGATAGTGTCTGACAAAAAGATAATGCGAATGAAGATAATAATTGCCCAAAGCAAAGAGAAAG 25 12818809 0.97937753 8 21 153 0.928571429 1.591064607 0.095238095 0.48 0.69047619 25 3 0 39 2L:12818743-12818843 7 32.5 123 FBgn0015399 5185.06 109.4633333 168.6866667 0.006268008 0.296903073 0.192664901 2 2 2 0.15 dme-miR-1012-3p 7mer-A1 TGACTAA 2L 12818962 12818968 - 2L_12818962_12818968_- 0.806155759 0.822053127 0.814104443 0.011241089 kek1 FBtr0332210 12816998 12819017 2L - 12818935 12819074 stop_codon kek1 FlyBase G10363.1 AGCAGCCGGAATTCGCCGGACGAGGGATACCAGGAAGGATGCGGCACGGATGTGTAAGCGCAGCGCTTCTCGGCGGAAGGAACGGCGAGGAAACCAAACCAAGAACTGACTAAACTTAACACAACTAAACAAGAGATATA 50 12818964 0.870300491 9 48 124 0.967741935 1.477121255 0.096774194 0.18 0.338709677 50 1 1 60 2L:12818935-12819074 7 kek1 FBtr0332210 12816998 12819017 TGACTAA 7mer-A1 dme-miR-1012-3p 2L - 12818939 12819089 stop_codon kek1 FlyBase G8014.1 AGGGCCCTGATCAGCAGCAGCCGGAATTCGCCGGACGAGGGATACCAGGAAGGATGCGGCACGGATGTGTAAGCGCAGCGCTTCTCGGCGGAAGGAACGGCGAGGAAACCAAACCAAGAACTGACTAAACTTAACACAACTAAACAAGAGA 46 12818963 0.858609974 13 44 108 0.942028986 1.210853365 0.173913043 0.391304348 0.594202899 46 1 3 65 2L:12818939-12819089 7 36 124 FBgn0015399 5185.06 109.4633333 168.6866667 0.006943025 0.32887725 0.213413429 -4 -5 -4.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 13001290 13001297 - 2L_13001290_13001297_- 0.631136477 0.631136347 0.631136412 1.41E-07 Vha68-1 FBtr0080429|FBtr0336618 13000768|13000963 13001411|13001411 2L - 13001280 13001347 3'utr Vha68-1 FlyBase G10383.1 AAACGAAATAAGAAACCAAAGCTAGGTTATTATTCGAATTCCCCATTCAATCTAGTCATATTTACATA 15 13001299 0.990715221 5 13 131 0.866666667 0.812913357 0.133333333 0 0 15 1 1 13 2L:13001280-13001347 8 Vha68-1 FBtr0336618|FBtr0080429 13000963|13000768 13001411|13001411 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 13001260 13001312 3'utr Vha68-1 FlyBase G8028.1 GAATTCCCCATTCAATCTAGTCATATTTACATAATGCATAATAAGATATTTGA 9 13001298 0.993367954 5 7 83 0.75 0.653212514 0.083333333 0.333333333 0.5 9 2 1 9 2L:13001260-13001312 8 10.5 125 FBgn0265262 180.4566667 8.25 12.47 0.058185714 1.272727273 0.84202085 2 1 1.5 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 2L 13012973 13012978 + 2L_13012973_13012978_+ 0.543051125 0.793076142 0.668063633 0.176794373 Tor FBtr0080422|FBtr0336615 13012931|13012931 13013197|13013197 2L + 13012918 13013002 stop_codon Tor FlyBase G4303.1 TGTCCGTTTTGGTAGGTCAACCGATCCGGCATAGATCCCGTGCGACAACCGGCAATTGACTGAGCGAGATTACGAACTTACGATT 17 13012973 0.890689766 6 17 58 1 1.255272505 0.388888889 0.058823529 0.111111111 17 0 0 18 2L:13012918-13013002 6 Tor FBtr0080422|FBtr0336615 13012931|13012931 13013197|13013197 TTGACT 6mer3-8 dme-miR-1012-3p 2L + 13012953 13013005 3'utr Tor FlyBase G3361.1 TCCCGTGCGACAACCGGCAATTGACTGAGCGAGATTACGAACTTACGATTACT 14 13012973 0.740099263 4 12 48 0.882352941 0.875061263 0.470588235 0.142857143 0.294117647 14 1 1 15 2L:13012953-13013005 6 12.5 126 FBgn0021796 1145.65 17.29333333 26.52 0.010910837 0.722821897 0.471342383 0 0 0 0.15 dme-miR-33-5p 7mer-A1 AATGCAA 2L 13022236 13022242 - 2L_13022236_13022242_- 0.731589272 0.747745837 0.739667554 0.011424371 CG9932 FBtr0310277|FBtr0336617 13021866|13021866 13023322|13023322 2L - 13022194 13022421 3'utr CG9932 FlyBase G10413.1 TTAGTTTCTACTACGGATTAGTTATGTTCTCATCATTAGTGCGAATGTTTTCCAGCAAACGGCGTCTTTGTAGCACAGTGTAGGCGTTAACACTACAAACAAAATGTTATCATTAAACTATAAGCAAACAAAAAGAACACATGTGGAATAGCGGGGCCATATTTAAATAGTTTAAACTTAATGCAAGGAAACATTTGAAAACAAAGCAAATCAAAACCAGAAGATATA 81 13022240 0.974564496 24 79 486 0.966292135 1.934498451 0.056179775 0.098765432 0.179775281 81 3 0 86 2L:13022194-13022421 7 CG9932 FBtr0336617|FBtr0310277 13021866|13021866 13023322|13023322 AATGCAA 7mer-A1 dme-miR-33-5p 2L - 13022224 13022292 3'utr CG9932 FlyBase G8052.1 AAAAAGAACACATGTGGAATAGCGGGGCCATATTTAAATAGTTTAAACTTAATGCAAGGAAACATTTGA 43 13022240 0.962165106 6 41 209 0.966666667 1.763427994 0.016666667 0.255813953 0.466666667 43 2 0 58 2L:13022224-13022292 7 43.5 127 FBgn0262160 822.2633333 11.45 17.61 0.05290276 3.799126638 2.470187394 -2 -2 -2 0.15 dme-miR-92b-3p 6mer2-7 TGCAAT 2L 13022627 13022632 - 2L_13022627_13022632_- 0.999999878 1 0.999999939 7.07E-08 CG9932 FBtr0310277|FBtr0336617 13021866|13021866 13023322|13023322 2L - 13022604 13022654 3'utr CG9932 FlyBase G10414.1 AAGAAAGTGAGCGCGTATATCATGCAATGAATATGGTACTATATACATACT 24 13022636 0.66228318 6 23 124 0.965517241 1.447158031 0.344827586 0.166666667 0.310344828 24 1 0 28 2L:13022604-13022654 6 CG9932 FBtr0336617|FBtr0310277 13021866|13021866 13023322|13023322 TGCAAT 6mer2-7 dme-miR-92b-3p 2L - 13022601 13022652 3'utr CG9932 FlyBase G8054.1 GAAAGTGAGCGCGTATATCATGCAATGAATATGGTACTATATACATACTATA 19 13022635 0.979678543 6 15 106 0.740740741 1.301029996 0.481481481 0.315789474 0.518518519 19 7 0 20 2L:13022601-13022652 6 20.5 128 FBgn0262160 822.2633333 11.45 17.61 0.024931186 1.790393013 1.1641113 4 3 3.5 0.15 dme-miR-276a-3p 6mer2-7 GTTCCT 2L 13023079 13023084 - 2L_13023079_13023084_- 0.980246885 0.984922515 0.9825847 0.003306148 CG9932 FBtr0310277|FBtr0336616|FBtr0089956|FBtr0336617 13021866|13022669|13022669|13021866 13023322|13023322|13023322|13023322 2L - 13023048 13023102 3'utr CG9932 FlyBase G10418.1 CACACCTAGTTGGAACATGTTCCTGCACTTTTACGTTTTTTCTAGAACCTAAGGT 21 13023085 0.975201836 5 19 162 0.916666667 1.342422681 0.125 0.142857143 0.25 21 2 0 22 2L:13023048-13023102 6 CG9932 FBtr0089956|FBtr0336617|FBtr0310277|FBtr0336616 13022669|13021866|13021866|13022669 13023322|13023322|13023322|13023322 GTTCCT 6mer2-7 dme-miR-276a-3p 2L - 13023048 13023104 3'utr CG9932 FlyBase G8058.1 TACACACCTAGTTGGAACATGTTCCTGCACTTTTACGTTTTTTCTAGAACCTAAGGT 8 13023085 0.979996243 3 7 64 0.916666667 1.041392685 0 0.375 0.583333333 8 1 0 11 2L:13023048-13023104 6 13.5 129 FBgn0262160 822.2633333 11.45 17.61 0.016418098 1.179039301 0.766609881 1 1 1 0.15 dme-miR-282-5p 6mer2-7 GAGGCT 2L 13168888 13168893 + 2L_13168888_13168893_+ 0.982867826 0.956678088 0.969772957 0.018518914 Sir2 FBtr0080434 13168640 13169551 2L + 13168864 13168964 3'utr Sir2 FlyBase G4323.1 CGGATCCACTAGTTTACTCAATTCGAGGCTTTAGAGATCTGACCCTCGTTGCTTTACCACCAACCCCTTATGCCCAATCCCGTTTTGATATTTTTGAAAAA 49 13168894 0.981189427 15 47 343 0.95 1.45484486 0.216666667 0.224489796 0.366666667 49 2 1 57 2L:13168864-13168964 6 Sir2 FBtr0080434 13168640 13169551 GAGGCT 6mer2-7 dme-miR-282-5p 2L + 13168843 13168956 3'utr Sir2 FlyBase G3368.1 GAAGTTTTCAAGAAATGAAACCGGATCCACTAGTTTACTCAATTCGAGGCTTTAGAGATCTGACCCTCGTTGCTTTACCACCAACCCCTTATGCCCAATCCCGTTTTGATATTT 35 13168894 0.974111332 15 35 214 1 1.672097858 0.340425532 0.257142857 0.446808511 35 0 0 47 2L:13168843-13168956 6 29.5 130 FBgn0024291 729.5333333 23.15666667 35.49 0.040436809 1.273931193 0.831220062 -6 -6 -6 0.15 dme-miR-33-5p 7mer-A1 AATGCAA 2L 13169181 13169187 + 2L_13169181_13169187_+ 0.753707193 0.782771728 0.76823946 0.020551705 Sir2 FBtr0080434 13168640 13169551 2L + 13169160 13169277 3'utr Sir2 FlyBase G4325.1 TAACATATTCAAAACTATGCAAATGCAAACGGAAAAATACGTTAGTTTTAGTTAAAAACTAGACACAAACACTCTGTATATAAGCACTCGCCCCTAATTTGTATTGTACATGATTCTT 16 13169177 0.979437784 10 16 112 1 1.255272505 0.333333333 0.125 0.222222222 16 0 0 18 2L:13169160-13169277 7 Sir2 FBtr0080434 13168640 13169551 AATGCAA 7mer-A1 dme-miR-33-5p 2L + 13169143 13169211 3'utr Sir2 FlyBase G3371.1 AAATCTAGTTCTAAGCGTAACATATTCAAAACTATGCAAATGCAAACGGAAAAATACGTTAGTTTTAGT 12 13169177 0.931831143 5 12 51 1 1.278753601 0.473684211 0.5 0.684210526 12 0 0 19 2L:13169143-13169211 7 9 131 FBgn0024291 729.5333333 23.15666667 35.49 0.012336654 0.388656974 0.253592561 4 4 4 0.15 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA 2L 13169746 13169753 - 2L_13169746_13169753_- 0.627006422 0.438637464 0.532821943 0.133196927 Sfmbt FBtr0080491|FBtr0333236|FBtr0289981|FBtr0080492 13169647|13169647|13169647|13169647 13170451|13170451|13170451|13170451 2L - 13169728 13169806 3'utr Sfmbt FlyBase G10449.1 TTCCGGTGTCACACATCTCTGCAAGGAGGGCATTATTGGTGTAAGGCAAACTTTTGAAGAAGGCAACCTTAATGATAAA 24 13169754 0.852733185 6 24 116 1 1.491361694 0.193548387 0.25 0.419354839 24 0 0 31 2L:13169728-13169806 8 Sfmbt FBtr0080492|FBtr0289981|FBtr0333236|FBtr0080491 13169647|13169647|13169647|13169647 13170451|13170451|13170451|13170451 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p 2L - 13169728 13169809 3'utr Sfmbt FlyBase G8077.1 TCGTTCCGGTGTCACACATCTCTGCAAGGAGGGCATTATTGGTGTAAGGCAAACTTTTGAAGAAGGCAACCTTAATGATAAA 27 13169754 0.911199588 6 25 146 0.973684211 1.568201724 0.236842105 0.333333333 0.526315789 27 1 0 37 2L:13169728-13169809 8 10 132 FBgn0032475 1744.74 46.46666667 71.1 0.005731513 0.215208034 0.140646976 1 1 1 0.15 dme-miR-283-5p 8mer-A1 TGATATTA 2L 13178947 13178954 + 2L_13178947_13178954_+ 0.591266619 0.590525393 0.590896006 0.000524108 CG5439 FBtr0080435 13178812 13178978 2L + 13178876 13178970 3'utr CG5439 FlyBase G4333.1 TTTATCTATTTCGTTGTAGATATCTTTATCTATATGTGTAATAACGGAGTTGGTCCAAGTGTTGTAATCATTGATATTAAATAAAGTTAAGCCTT 51 13178946 0.986672498 8 51 490 1 1.740362689 0.090909091 0.058823529 0.127272727 51 0 0 55 2L:13178876-13178970 8 CG5439 FBtr0080435 13178812 13178978 TGATATTA 8mer-A1 dme-miR-283-5p 2L + 13178901 13178969 3'utr CG5439 FlyBase G3378.1 TTATCTATATGTGTAATAACGGAGTTGGTCCAAGTGTTGTAATCATTGATATTAAATAAAGTTAAGCCT 33 13178946 0.989590839 5 32 311 0.980769231 1.707570176 0.019230769 0.424242424 0.634615385 33 1 0 51 2L:13178901-13178969 8 37.5 133 FBgn0032476 436.6666667 29.4 45.33 0.085877863 1.275510204 0.827266711 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 13180752 13180759 - 2L_13180752_13180759_- 0.471865821 0.47743888 0.474652351 0.003940777 CG31849 FBtr0080490|FBtr0080490|FBtr0080490 13180396|13180396|13180396 13180988|13180988|13180988 2L - 13180720 13180786 3'utr CG31849 FlyBase G10472.1 AGCAGACAGGACAGACAGACCCGCCATCTGTGATAAGAAAAACCAGAACTAAACAATGAATTTATGA 48 13180760 0.95162593 4 46 143 0.947368421 1.73239376 0.157894737 0.145833333 0.280701754 48 3 0 54 2L:13180720-13180786 8 CG31849 FBtr0080490|FBtr0080490|FBtr0080490 13180396|13180396|13180396 13180988|13180988|13180988 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 13180746 13180783 3'utr CG31849 FlyBase G8088.1 AGACAGGACAGACAGACCCGCCATCTGTGATAAGAAAA 32 13180760 0.959104993 2 32 96 1 1.602059991 0.175 0.21875 0.375 32 0 0 40 2L:13180746-13180783 8 39 134 FBgn0051849 77.33333333 4.373333333 6.81 0.504310345 8.917682927 5.726872247 1 1 1 0.15 dme-bantam-3p 7mer-m8 TGATCTC 2L 13183895 13183901 - 2L_13183895_13183901_- 0.660975442 0.661611928 0.661293685 0.000450073 CG16974 FBtr0305555 13183847 13185416 2L - 13183856 13183930 3'utr CG16974 FlyBase G10475.1 GGCGACCCTTCCTGTAGTTCCCATCATACTGATCTCCGTTGGGCAGGATGGCCCAACCTCTACCTTGTCTCTGTC 32 13183901 0.999830633 7 30 220 0.973684211 1.267171728 0.078947368 0.15625 0.289473684 32 0 1 37 2L:13183856-13183930 7 CG16974 FBtr0305555 13183847 13185416 TGATCTC 7mer-m8 dme-bantam-3p 2L - 13183858 13183916 3'utr CG16974 FlyBase G8089.1 TAGTTCCCATCATACTGATCTCCGTTGGGCAGGATGGCCCAACCTCTACCTTGTCTCTG 20 13183901 0.985176194 7 18 147 0.857142857 1.380211242 0.178571429 0.3 0.5 20 4 0 24 2L:13183858-13183916 7 24 135 FBgn0032479 2807.686667 76.92 117.31 0.008547962 0.31201248 0.204586139 0 0 0 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 2L 13185071 13185077 - 2L_13185071_13185077_- 0.521175039 0.519277853 0.520226446 0.001341452 CG16974 FBtr0305555|FBtr0080489 13183847|13184945 13185416|13185416 2L - 13185059 13185097 3'utr CG16974 FlyBase G10477.1 TGAAAAGAGAGCCCCCCATTTGTGATTTCATTACTTAAC 15 13185078 0.981420804 4 15 110 1 1.361727836 0.304347826 0.333333333 0.565217391 15 0 0 23 2L:13185059-13185097 7 CG16974 FBtr0080489|FBtr0305555 13184945|13183847 13185416|13185416 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 13185065 13185093 3'utr CG16974 FlyBase G8090.1 AAGAGAGCCCCCCATTTGTGATTTCATTA 11 13185072 0.972060849 4 11 68 1 1.230448921 0.176470588 0.272727273 0.529411765 11 0 0 17 2L:13185065-13185093 7 13 136 FBgn0032479 2807.686667 76.92 117.31 0.004630146 0.16900676 0.110817492 1 -5 -2 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 2L 13196492 13196498 + 2L_13196492_13196498_+ 0.6196815 0.620044556 0.619863028 0.00025675 Edem2 FBtr0080438|FBtr0333235 13196270|13196270 13197281|13197281 2L + 13196457 13196539 3'utr Edem2 FlyBase G4347.1 ATGCCACGAGTTATGGAACTCAGTTTAGGGATCTTTGCATTTCGTGGTTGGTTCTCAGGCAGGCAATTGGCTTCCTAGTGGCT 20 13196491 0.989274348 8 18 169 0.92 1.361727836 0.4 0.2 0.36 20 2 0 23 2L:13196457-13196539 7 Edem2 FBtr0333235|FBtr0080438 13196270|13196270 13197281|13197281 TGCATTT 7mer-m8 dme-miR-277-3p 2L + 13196382 13196540 3'utr Edem2 FlyBase G3385.1 GTAACGTGTGTACAGTAAGCGAACGTAACTAAATTGGAATTTCCTGTACTTTACTAGACATGTAAGAGCGATTTAATGCCACGAGTTATGGAACTCAGTTTAGGGATCTTTGCATTTCGTGGTTGGTTCTCAGGCAGGCAATTGGCTTCCTAGTGGCTA 43 13196491 0.988508391 18 40 372 0.9375 1.77815125 0.4375 0.348837209 0.5625 43 4 0 60 2L:13196382-13196540 7 17.5 137 FBgn0032480 836.01 24.70333333 37.89 0.020932764 0.708406423 0.461863288 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 13197053 13197058 + 2L_13197053_13197058_+ 0.747557629 0.959699265 0.853628447 0.150006835 Edem2 FBtr0080438|FBtr0080438|FBtr0080438|FBtr0333235|FBtr0333235|FBtr0333235 13196270|13196270|13196270|13196270|13196270|13196270 13197281|13197281|13197281|13197281|13197281|13197281 2L + 13197035 13197073 3'utr Edem2 FlyBase G4351.1 TTGTGGATGACAACATATCTGTGAATCGACTAGATGCAA 15 13197052 0.700675943 3 14 93 1 1.230448921 0.235294118 0.133333333 0.235294118 15 0 0 17 2L:13197035-13197073 6 Edem2 FBtr0333235|FBtr0333235|FBtr0333235|FBtr0080438|FBtr0080438|FBtr0080438 13196270|13196270|13196270|13196270|13196270|13196270 13197281|13197281|13197281|13197281|13197281|13197281 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 13197036 13197066 3'utr Edem2 FlyBase G3387.1 TGTGGATGACAACATATCTGTGAATCGACTA 6 13197052 0.707589229 2 4 34 0.857142857 0.77815125 0.142857143 0.166666667 0.285714286 6 1 0 6 2L:13197036-13197066 6 10.5 138 FBgn0032480 836.01 24.70333333 37.89 0.012559658 0.425043854 0.277117973 1 1 1 0.15 dme-miR-305-3p 6mer3-8 ATGTGC 2L 13197438 13197443 - 2L_13197438_13197443_- 0.999999619 0.919565371 0.959782495 0.056875568 CG16972 FBtr0080488 13197100 13197555 2L - 13197358 13197474 3'utr CG16972 FlyBase G10502.1 TTGAATATCACCCAGAATACCCGATCTATAAATGTGCTTTTGGCTGTCTGCCCAAGTATAGTTCAAATATAGGAAACTATAATAAGTTGCGTGTTAAGCCCTGTAGTCCTAACAATC 25 13197457 0.925816835 11 22 158 0.896551724 1.414973348 0.275862069 0.16 0.275862069 25 3 0 26 2L:13197358-13197474 6 CG16972 FBtr0080488 13197100 13197555 ATGTGC 6mer3-8 dme-miR-305-3p 2L - 13197391 13197469 3'utr CG16972 FlyBase G8104.1 TATCACCCAGAATACCCGATCTATAAATGTGCTTTTGGCTGTCTGCCCAAGTATAGTTCAAATATAGGAAACTATAATA 16 13197416 0.858847894 7 15 103 0.952380952 1.301029996 0 0.3125 0.476190476 16 1 0 20 2L:13197391-13197469 6 7.5 139 FBgn0032481 619.7033333 12.68666667 19.43 0.012102565 0.591171834 0.386001029 14 -27 -6.5 0.15 dme-bantam-3p 6mer2-7 GATCTC 2L 13289481 13289486 + 2L_13289481_13289486_+ 0.983709729 0.913192895 0.948451312 0.049862907 Uvrag FBtr0080460|FBtr0334865 13289289|13289289 13289556|13289556 2L + 13289438 13289492 3'utr Uvrag FlyBase G4386.1 TGAACGGTAGTCCATTGCGATAATATTATTTTTAGTTGTTTAAGATCTCTGTGTA 19 13289487 0.991711212 6 19 200 1 1.414973348 0.730769231 0.210526316 0.423076923 19 0 0 26 2L:13289438-13289492 6 Uvrag FBtr0334865|FBtr0080460 13289289|13289289 13289556|13289556 GATCTC 6mer2-7 dme-bantam-3p 2L + 13289437 13289499 3'utr Uvrag FlyBase G3415.1 GTGAACGGTAGTCCATTGCGATAATATTATTTTTAGTTGTTTAAGATCTCTGTGTAAATTCCC 21 13289487 0.992520929 7 21 236 1 1.414973348 0.576923077 0.238095238 0.384615385 21 0 0 26 2L:13289437-13289499 6 18 140 FBgn0032499 266.2566667 13.1 20.21333333 0.067603941 1.374045802 0.890501319 -6 -6 -6 0.15 dme-miR-1012-3p 6mer2-7 TGACTA 2L 13301106 13301111 + 2L_13301106_13301111_+ 0.998382136 0.94108202 0.969732078 0.040517289 CG31729 FBtr0080462|FBtr0344140|FBtr0080461|FBtr0344851 13301064|13301064|13301064|13301064 13301668|13301668|13301516|13301516 2L + 13301050 13301119 stop_codon CG31729 FlyBase G4407.1 CTTGAAGCTCTCTTAGATGGCGGCCTGGCAAATGAAATACAAATTACACATTATCCTGACTATAATTTCC 33 13301100 0.943179603 11 32 204 0.975609756 1.602059991 0.024390244 0.212121212 0.365853659 33 1 0 40 2L:13301050-13301119 6 CG31729 FBtr0344851|FBtr0080461|FBtr0344140|FBtr0080462 13301064|13301064|13301064|13301064 13301516|13301516|13301668|13301668 TGACTA 6mer2-7 dme-miR-1012-3p 2L + 13301088 13301122 3'utr CG31729 FlyBase G3429.2 ACAAATTACACATTATCCTGACTATAATTTCCATT 16 13301100 0.755958543 2 13 111 0.782608696 1.255272505 0 0.3125 0.52173913 16 5 0 18 2L:13301088-13301122 6 18 141 FBgn0051729 1443.476667 38.43 58.66333333 0.012469893 0.468384075 0.306835616 6 6 6 0.15 dme-miR-2a-2-5p 8mer-A1 TGATGAGA 2L 13376051 13376058 + 2L_13376051_13376058_+ 0.601174899 0.601188308 0.601181604 9.48E-06 CG6565 FBtr0080468|FBtr0346420|FBtr0342631 13375839|13375839|13375839 13376165|13376404|13376165 2L + 13375998 13376072 3'utr CG6565 FlyBase G4433.1 TCAGAGCAAGTGTGCAATAGGTGGAAGTTTTGCTCTTAACATGAGTGCCACTTTGATGAGAAACTTAAAAATAAA 9 13376050 0.976265819 6 8 49 0.888888889 0.903089987 0.111111111 0 0 9 1 0 8 2L:13375998-13376072 8 CG6565 FBtr0342631|FBtr0080468|FBtr0346420 13375839|13375839|13375839 13376165|13376165|13376404 TGATGAGA 8mer-A1 dme-miR-2a-2-5p 2L + 13376016 13376062 3'utr CG6565 FlyBase G3445.1 AGGTGGAAGTTTTGCTCTTAACATGAGTGCCACTTTGATGAGAAACT 8 13376050 0.978307487 4 7 48 1 1.113943352 0 0.5 0.692307692 8 0 0 13 2L:13376016-13376062 8 6 142 FBgn0032513 608.7166667 34.34 52.78 0.009856803 0.174723355 0.113679424 1 1 1 0.15 dme-miR-986-5p 6mer2-7 TTCGAG 2L 13382259 13382264 + 2L_13382259_13382264_+ 0.955593929 0.98857325 0.972083589 0.023319887 beta'COP FBtr0080469 13382180 13382382 2L + 13382246 13382296 3'utr beta'COP FlyBase G4456.1 ACATTTCGTGCATTTCGAGCCACAGAATTCCGCGCATGCATTCACATTTGA 15 13382273 0.930221863 4 15 60 1 1.342422681 0.272727273 0.4 0.590909091 15 0 0 22 2L:13382246-13382296 6 beta'COP FBtr0080469 13382180 13382382 TTCGAG 6mer2-7 dme-miR-986-5p 2L + 13382248 13382301 3'utr beta'COP FlyBase G3462.1 ATTTCGTGCATTTCGAGCCACAGAATTCCGCGCATGCATTCACATTTGATTTGA 14 13382273 0.783818562 4 13 63 0.956521739 1.342422681 0.565217391 0.428571429 0.652173913 14 1 0 22 2L:13382248-13382301 6 13.5 143 FBgn0025724 1623.336667 63.76333333 97.48 0.008316205 0.211720424 0.138489947 -14 -14 -14 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2L 13385551 13385557 + 2L_13385551_13385557_+ 0.655347301 0.65787905 0.656613175 0.001790182 loqs FBtr0080497|FBtr0342633|FBtr0342632|FBtr0100220|FBtr0080498 13385231|13385231|13385231|13384666|13385231 13385671|13385671|13385671|13385671|13385671 2L + 13385522 13385574 3'utr loqs FlyBase G4461.1 AGACAAGCGTGTAATCGATATTGGAATCTTCTAGTCGCTTTCAAATTCTGAAA 64 13385550 0.987526409 6 64 568 1 1.944482672 0 0.28125 0.477272727 64 0 0 88 2L:13385522-13385574 7 loqs FBtr0342633|FBtr0342632|FBtr0100220|FBtr0080498|FBtr0080497 13385231|13385231|13384666|13385231|13385231 13385671|13385671|13385671|13385671|13385671 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2L + 13385521 13385566 3'utr loqs FlyBase G3466.1 CAGACAAGCGTGTAATCGATATTGGAATCTTCTAGTCGCTTTCAAA 49 13385550 0.98663556 5 49 413 1 1.838849091 0 0.244897959 0.463768116 49 0 0 69 2L:13385521-13385566 7 55.5 144 FBgn0032515 158.85 11.16666667 17.08333333 0.349386213 4.970149254 3.248780488 1 1 1 0.15 dme-miR-14-3p 7mer-A1 AGACTGA 2L 13394050 13394056 - 2L_13394050_13394056_- 0.799204185 0.783635023 0.791419604 0.011009087 RpL24 FBtr0342637 13393685 13394412 2L - 13394034 13394074 3'utr RpL24 FlyBase G10595.1 AATTGAATATCCGAAGTTAGACTGAGAGTATAAAAATCGCA 15 13394058 0.801497233 2 15 75 1 1.361727836 0.086956522 0.266666667 0.52173913 15 0 0 23 2L:13394034-13394074 7 RpL24 FBtr0342637 13393685 13394412 AGACTGA 7mer-A1 dme-miR-14-3p 2L - 13394038 13394072 3'utr RpL24 FlyBase G8167.1 TTGAATATCCGAAGTTAGACTGAGAGTATAAAAAT 18 13394058 0.785353793 3 18 74 1 1.431363764 0.222222222 0.444444444 0.62962963 18 0 0 27 2L:13394038-13394072 7 16 145 FBgn0032518 6558.51 1040.203333 1578.5 0.002439579 0.015381608 0.010136205 2 2 2 0.15 dme-miR-932-5p 7mer-A1 GAATTGA 2L 13394348 13394354 - 2L_13394348_13394354_- 0.812298065 0.805870426 0.809084245 0.00454507 RpL24 FBtr0342637 13393685 13394412 2L - 13394339 13394449 stop_codon RpL24 FlyBase G10596.1 GCAGAAGGCTGCTCCCCGCGTCGGAGGCAAGCGGTAAACACCTTTCGCCGGTAGTGATGTGCTAAAGTTAGTCCAGGATTTAAGGAACCACTCGTGAATTGAAAATTAAAC 107 13394351 0.761265761 19 102 506 0.940740741 1.50174373 0.140740741 0.214953271 0.377777778 107 5 3 127 2L:13394339-13394449 7 RpL24 FBtr0342637 13393685 13394412 GAATTGA 7mer-A1 dme-miR-932-5p 2L - 13394304 13394419 stop_codon RpL24 FlyBase G8168.1 GCGGTAAACACCTTTCGCCGGTAGTGATGTGCTAAAGTTAGTCCAGGATTTAAGGAACCACTCGTGAATTGAAAATTAAACAAACGCCGCGAATGCGAATTCGTGGTGACCAAAAA 122 13394351 0.953629484 18 120 547 0.989795918 2.28780173 0.12244898 0.401639344 0.62755102 122 2 0 194 2L:13394304-13394419 7 69.5 146 FBgn0032518 6558.51 1040.203333 1578.5 0.010596919 0.06681386 0.044029142 -3 -3 -3 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 134009 134014 + 2L_134009_134014_+ 0.999994771 0.998917821 0.999456296 0.000761554 Gs1 FBtr0078115|FBtr0078114 133681|133681 134472|134472 2L + 133997 134030 5'utr Gs1 FlyBase G475.1 CGTTAATTTTTTGTACCTTTTAGATCAAACAAAC 13 134016 0.70171495 3 13 147 1 1.204119983 0 0.153846154 0.3125 13 0 0 16 2L:133997-134030 6 Gs1 FBtr0078114|FBtr0078115 133681|133681 134472|134472 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 133996 134027 5'utr Gs1 FlyBase G395.1 ACGTTAATTTTTTGTACCTTTTAGATCAAACA 17 134016 0.742041269 2 17 193 1 1.447158031 0 0.470588235 0.678571429 17 0 0 28 2L:133996-134027 6 15 147 FBgn0001142 30.66666667 1.793333333 2.72 0.489130435 8.364312268 5.514705882 -7 -7 -7 0.15 dme-miR-1007-3p 6mer3-8 TGAGCT 2L 13410801 13410806 + 2L_13410801_13410806_+ 0.999997915 0.999994535 0.999996225 2.40E-06 CG7110 FBtr0080500|FBtr0345438 13410635|13410635 13411047|13410955 2L + 13410765 13410857 3'utr CG7110 FlyBase G4481.1 ATTTTGTAAACAACTCATGTAGTTATAACTTTATAGTGAGCTGGTTCCAAGTGCTTCGGCTGTTTCATTCAGCGACTCTAATACATAAGGCAT 19 13410820 0.748782427 12 17 137 0.923076923 1.380211242 0.153846154 0.210526316 0.423076923 19 2 0 24 2L:13410765-13410857 6 CG7110 FBtr0080500|FBtr0345438 13410635|13410635 13411047|13410955 TGAGCT 6mer3-8 dme-miR-1007-3p 2L + 13410767 13410827 3'utr CG7110 FlyBase G3479.1 TTTGTAAACAACTCATGTAGTTATAACTTTATAGTGAGCTGGTTCCAAGTGCTTCGGCTGT 14 13410784 0.776642792 6 13 105 1 1.322219295 0.19047619 0.285714286 0.523809524 14 0 0 21 2L:13410767-13410827 6 9 148 FBgn0032521 924.9866667 37.5 57.29 0.00972987 0.24 0.157095479 -19 17 -1 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2L 13502806 13502812 - 2L_13502806_13502812_- 0.661605706 0.661552901 0.661579303 3.73E-05 B4 FBtr0332509|FBtr0080514|FBtr0080513 13500622|13502654|13502654 13504503|13504503|13504503 2L - 13502752 13502841 3'utr B4 FlyBase G10603.1 AAGTAGAGTTTAGACACTAAGGTCCAGTTTCTAGTCTTAATTTGAAAACAAATATGAAGCCGTTTCGAAATGGAGACATGCCAAACTTTT 61 13502813 0.952635164 6 58 479 0.974025974 1.875061263 0.077922078 0.229508197 0.38961039 61 2 0 75 2L:13502752-13502841 7 B4 FBtr0080513|FBtr0332509|FBtr0080514 13502654|13500622|13502654 13504503|13504503|13504503 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2L - 13502793 13502840 3'utr B4 FlyBase G8172.1 AGTAGAGTTTAGACACTAAGGTCCAGTTTCTAGTCTTAATTTGAAAAC 45 13502813 0.73558114 2 44 376 0.983606557 1.77815125 0.06557377 0.333333333 0.508196721 45 1 0 60 2L:13502793-13502840 7 48 149 FBgn0023407 923.55 17.94 27.61666667 0.051973364 2.675585284 1.738080869 1 1 1 0.15 dme-bantam-3p 6mer2-7 GATCTC 2L 13503093 13503098 - 2L_13503093_13503098_- 0.999997591 0.999999976 0.999998784 1.70E-06 B4 FBtr0332509|FBtr0080514|FBtr0080513 13500622|13502654|13502654 13504503|13504503|13504503 2L - 13503075 13503154 3'utr B4 FlyBase G10605.1 ATTGTATATTTGTAAAATAGCATAAACTTTTAGGGCAAAATGCCAAACTTTTACACGATCTCTCGTATTTTGTCGTTCTT 40 13503103 0.791648182 11 36 336 0.96 1.681241237 0.02 0.175 0.34 40 2 0 48 2L:13503075-13503154 6 B4 FBtr0080513|FBtr0332509|FBtr0080514 13502654|13500622|13502654 13504503|13504503|13504503 GATCTC 6mer2-7 dme-bantam-3p 2L - 13503074 13503137 3'utr B4 FlyBase G8173.1 TAGCATAAACTTTTAGGGCAAAATGCCAAACTTTTACACGATCTCTCGTATTTTGTCGTTCTTT 30 13503104 0.681875235 10 28 262 0.866666667 1.591064607 0 0.333333333 0.555555556 30 6 0 39 2L:13503074-13503137 6 29 150 FBgn0023407 923.55 17.94 27.61666667 0.031400574 1.616499443 1.050090525 5 6 5.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2L 13636744 13636750 + 2L_13636744_13636750_+ 0.820361371 0.823347938 0.821854655 0.002111774 kuz FBtr0080509|FBtr0080510|FBtr0342903 13636648|13636648|13636247 13638238|13639411|13636995 2L + 13636728 13636757 3'utr kuz FlyBase G4505.1 ATAGAATCGCCCGCTGCTAGTCATCGAACT 12 13636742 0.860059869 2 12 49 1 1.079181246 0.166666667 0 0 12 0 0 12 2L:13636728-13636757 7 kuz FBtr0342903|FBtr0080509|FBtr0080510 13636247|13636648|13636648 13636995|13638238|13639411 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L + 13636720 13636757 3'utr kuz FlyBase G3496.1 AACCACATATAGAATCGCCCGCTGCTAGTCATCGAACT 6 13636742 0.945611426 3 6 27 1 0.84509804 0.428571429 0.166666667 0.285714286 6 0 0 7 2L:13636720-13636757 7 9 151 FBgn0259984 6208.386667 134.8066667 206.8566667 0.001449652 0.066762277 0.043508387 2 2 2 0.15 dme-miR-79-3p 7mer-A1 AGCTTTA 2L 13637314 13637320 + 2L_13637314_13637320_+ 0.822489644 0.823349561 0.822919603 0.000608112 kuz FBtr0080509|FBtr0080510 13636648|13636648 13638238|13639411 2L + 13637289 13637339 stop_codon kuz FlyBase G4507.1 CGTCGCGCCGCCTCCGCTACAAGTAAGCTTTAGTCGGCCGACATCGTTGCA 10 13637312 0.961517742 2 9 58 0.833333333 1 0.416666667 0.2 0.333333333 10 2 0 10 2L:13637289-13637339 7 kuz FBtr0080509|FBtr0080510 13636648|13636648 13638238|13639411 AGCTTTA 7mer-A1 dme-miR-79-3p 2L + 13637298 13637331 stop_codon kuz FlyBase G3497.1 GCCTCCGCTACAAGTAAGCTTTAGTCGGCCGACA 5 13637321 0.894000975 3 5 26 1 0.903089987 0.125 0.2 0.5 5 0 0 8 2L:13637298-13637331 7 7.5 152 FBgn0259984 6208.386667 134.8066667 206.8566667 0.001208043 0.055635231 0.03625699 2 -7 -2.5 0.15 dme-miR-283-5p 8mer-m1 TGATATTT 2L 13637779 13637786 + 2L_13637779_13637786_+ 0.555043785 0.554466084 0.554754934 0.000408496 kuz FBtr0100660|FBtr0080509|FBtr0080510|FBtr0301412 13637320|13636648|13636648|13637495 13639411|13638238|13639411|13638238 2L + 13637747 13637786 3'utr kuz FlyBase G4509.1 AATTTCGTAATACAGAAAAAGCTGAAAGTGAATGATATTT 9 13637778 0.873734376 4 9 38 1 1.113943352 0.153846154 0.333333333 0.538461538 9 0 0 13 2L:13637747-13637786 8 kuz FBtr0301412|FBtr0080509|FBtr0080510|FBtr0100660 13637495|13636648|13636648|13637320 13638238|13638238|13639411|13639411 TGATATTT 8mer-m1 dme-miR-283-5p 2L + 13637755 13637786 3'utr kuz FlyBase G3500.1 AATACAGAAAAAGCTGAAAGTGAATGATATTT 5 13637779 0.915451934 2 5 19 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2L:13637755-13637786 8 6.5 153 FBgn0259984 6208.386667 134.8066667 206.8566667 0.001046971 0.0482172 0.031422724 1 0 0.5 0.15 dme-miR-968-5p 6mer3-8 ACTACT 2L 13638795 13638800 + 2L_13638795_13638800_+ 0.99960367 0.999118441 0.999361056 0.000343159 kuz FBtr0100660|FBtr0080510 13637320|13636648 13639411|13639411 2L + 13638724 13638808 3'utr kuz FlyBase G4511.3 TTTTGTCTGTGTTTCGTATTTGCATGCTCAAGAACTAATCGTGCAACTACTCACGGAGTCCCGACTGATGTACTACTCCAAGAAA 107 13638796 0.933798296 10 101 525 0.960629921 2.086359831 0.322834646 0.177570093 0.307086614 107 5 0 122 2L:13638724-13638808 6 kuz FBtr0080510|FBtr0100660 13636648|13637320 13639411|13639411 ACTACT 6mer3-8 dme-miR-968-5p 2L + 13638769 13638808 3'utr kuz FlyBase G3504.1 ACTACTCACGGAGTCCCGACTGATGTACTACTCCAAGAAA 64 13638796 0.703937022 4 62 307 0.990291262 1.707570176 0.40776699 0.40625 0.631067961 64 0 1 102 2L:13638769-13638808 6 73.5 154 FBgn0259984 6208.386667 134.8066667 206.8566667 0.011838824 0.545225261 0.355318498 -1 -1 -1 0.15 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 13782423 13782429 - 2L_13782423_13782429_- 0.810658046 0.820999134 0.81582859 0.007312262 CG16890 FBtr0343661|FBtr0329825 13782229|13782229 13782609|13782609 2L - 13782411 13782462 3'utr CG16890 FlyBase G10642.1 GACACCAAATCTAAAGTTGAACTGGACATTAAGGCTGTGACTCTGATTGATT 21 13782440 0.743182755 7 20 134 0.966666667 1.462397998 0.233333333 0.333333333 0.533333333 21 1 0 29 2L:13782411-13782462 7 CG16890 FBtr0329825|FBtr0343661 13782229|13782229 13782609|13782609 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L - 13782414 13782448 3'utr CG16890 FlyBase G8199.1 AGTTGAACTGGACATTAAGGCTGTGACTCTGATTG 9 13782433 0.73314951 3 9 56 1 1.041392685 0.272727273 0.222222222 0.363636364 9 0 0 11 2L:13782414-13782448 7 14 155 FBgn0028932 129.2066667 16.03333333 24.55666667 0.108353542 0.873180873 0.57010995 11 4 7.5 0.15 dme-miR-980-3p 6mer3-8 GGCAGC 2L 1380777 1380782 - 2L_1380777_1380782_- 0.998345265 0.997891441 0.998118353 0.000320956 lea FBtr0329985|FBtr0077941 1380084|1380084 1381443|1381611 2L - 1380723 1380813 3'utr lea FlyBase G6798.1 TAGTGTATACACCCACTTAGATAGATCGATGGGCAGCATTTTGTTTGTTACTTAAGGGGTTCGTAATTAGTCTAAGCGTCCAGGCAGATAT 31 1380774 0.704633136 12 30 190 0.972972973 1.556302501 0.135135135 0.161290323 0.297297297 31 1 0 36 2L:1380723-1380813 6 lea FBtr0329985|FBtr0077941 1380084|1380084 1381443|1381611 GGCAGC 6mer3-8 dme-miR-980-3p 2L - 1380700 1380814 3'utr lea FlyBase G5313.1 ATAGTGTATACACCCACTTAGATAGATCGATGGGCAGCATTTTGTTTGTTACTTAAGGGGTTCGTAATTAGTCTAAGCGTCCAGGCAGATATCAATTCAGTAGCCACGAATGTTT 27 1380773 0.981193301 11 26 191 0.974358974 1.579783597 0.076923077 0.37037037 0.564102564 27 1 0 38 2L:1380700-1380814 6 19 156 FBgn0002543 15.93666667 0.32 0.503333333 1.192219201 59.375 37.74834437 -8 -9 -8.5 0.15 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 1380829 1380836 - 2L_1380829_1380836_- 0.617427265 0.605099136 0.6112632 0.008717354 lea FBtr0329985|FBtr0077941 1380084|1380084 1381443|1381611 2L - 1380816 1380880 3'utr lea FlyBase G6799.1 AAGTTCCTCCAAGTATGCAGACGATGATAGCCAAAACGCTGCGTTAGCTTTAGAGTATACACATA 37 1380837 0.790261873 9 37 221 1 1.633468456 0.023255814 0.162162162 0.279069767 37 0 0 43 2L:1380816-1380880 8 lea FBtr0329985|FBtr0077941 1380084|1380084 1381443|1381611 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 1380817 1380877 3'utr lea FlyBase G5314.1 TTCCTCCAAGTATGCAGACGATGATAGCCAAAACGCTGCGTTAGCTTTAGAGTATACACAT 26 1380837 0.801575355 5 24 140 0.930232558 1.301029996 0.069767442 0.461538462 0.674418605 26 2 1 40 2L:1380817-1380877 8 23 157 FBgn0002543 15.93666667 0.32 0.503333333 1.443212717 71.875 45.69536424 1 1 1 0.15 dme-miR-14-3p 7mer-A1 AGACTGA 2L 1381143 1381149 - 2L_1381143_1381149_- 0.638141859 0.642900938 0.640521398 0.003365121 lea FBtr0329985|FBtr0077941 1380084|1380084 1381443|1381611 2L - 1381116 1381179 3'utr lea FlyBase G6800.2 TGTCACAAATGAGAAATGTGACCAAGACTGAGACTGACAGAGTGCGAGATTCGTGTGAGGATTA 1386 1381151 0.978131239 10 1347 4095 0.975609756 2.369745808 0.387269482 0.164502165 0.311124331 1386 35 6 1640 2L:1381116-1381179 7 lea FBtr0329985|FBtr0077941 1380084|1380084 1381443|1381611 AGACTGA 7mer-A1 dme-miR-14-3p 2L - 1381119 1381176 3'utr lea FlyBase G5316.1 CACAAATGAGAAATGTGACCAAGACTGAGACTGACAGAGTGCGAGATTCGTGTGAGGA 979 1381151 0.967139608 8 943 2772 0.97146402 2.495821753 0.377171216 0.433094995 0.655707196 979 42 4 1566 2L:1381119-1381176 7 1170.5 158 FBgn0002543 15.93666667 0.32 0.503333333 73.44697762 3657.8125 2325.496689 2 2 2 0.15 dme-miR-184-5p 8mer-m1 TGATAAGG 2L 13819398 13819405 + 2L_13819398_13819405_+ 0.49647595 0.459436719 0.477956335 0.026190669 Sos FBtr0080541 13819377 13819824 2L + 13819333 13819416 lincRNA_intron-lincRNA_exon Sos FlyBase G4579.1 AGATAAAGGTACGATGTTTCTTTACCCAAGTACAAACGAAGAATAATTTAAATTGCCTGGCGATGTGATAAGGACGAAAACTAC 33 13819387 0.974682324 9 29 191 0.868421053 1.041392685 0.368421053 0.151515152 0.263157895 33 3 2 33 2L:13819333-13819416 8 Sos FBtr0080541 13819377 13819824 TGATAAGG 8mer-m1 dme-miR-184-5p 2L + 13819377 13819409 stop_codon Sos FlyBase G3558.1 AATTTAAATTGCCTGGCGATGTGATAAGGACGA 10 13819388 0.701574928 6 9 49 0.75 1.079181246 0.5625 0.3 0.5625 10 4 0 12 2L:13819377-13819409 8 15 159 FBgn0001965 887.1 19.05333333 29.30333333 0.016909029 0.787263821 0.511887157 11 10 10.5 0.15 dme-miR-33-5p 6mer2-7 AATGCA 2L 13819663 13819668 + 2L_13819663_13819668_+ 0.947669787 0.593413711 0.770541749 0.250496891 Sos FBtr0080541 13819377 13819824 2L + 13819608 13819722 3'utr Sos FlyBase G4582.1 AGACAGACAAAATACGCTCTCATTTACACACAACAGGCACGCGCATATGGATAGGAATGCAGGACACACAAACCAAGCAAGCAACCAAGCAACCAACAAGAAATGCAAACAAGAA 24 13819665 0.876529361 7 22 56 0.928571429 1.414973348 0.071428571 0.125 0.25 24 2 0 26 2L:13819608-13819722 6 Sos FBtr0080541 13819377 13819824 AATGCA 6mer2-7 dme-miR-33-5p 2L + 13819643 13819681 3'utr Sos FlyBase G3560.1 GGCACGCGCATATGGATAGGAATGCAGGACACACAAACC 5 13819665 0.9112595 2 5 12 1 0.903089987 0 0.4 0.625 5 0 0 8 2L:13819643-13819681 6 10.5 160 FBgn0001965 887.1 19.05333333 29.30333333 0.011836321 0.551084675 0.35832101 -2 -2 -2 0.15 dme-miR-282-5p 6mer2-7 GAGGCT 2L 13824070 13824075 - 2L_13824070_13824075_- 0.999676601 0.999926745 0.999801673 0.000176847 tam FBtr0080571 13823978 13824139 2L - 13824042 13824098 3'utr tam FlyBase G10648.1 ACTCAGGAAGTCAAGGAGACTTGGAGGCTGTTACTAGTTCCTCTTAAATTGTAAGGC 28 13824077 0.814754382 7 26 155 0.96875 1.491361694 0.125 0.107142857 0.21875 28 1 0 31 2L:13824042-13824098 6 tam FBtr0080571 13823978 13824139 GAGGCT 6mer2-7 dme-miR-282-5p 2L - 13824042 13824098 3'utr tam FlyBase G8204.1 ACTCAGGAAGTCAAGGAGACTTGGAGGCTGTTACTAGTTCCTCTTAAATTGTAAGGC 19 13824077 0.920677179 7 18 92 1 1.51851394 0.212121212 0.578947368 0.757575758 19 0 0 33 2L:13824042-13824098 6 21 161 FBgn0004406 477.07 15.66333333 23.98666667 0.044018697 1.34071079 0.875486381 2 2 2 0.15 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 13831862 13831868 - 2L_13831862_13831868_- 0.45718115 0.460240524 0.458710837 0.002163252 CG33649 FBtr0091626 13831480 13832624 2L - 13831830 13831884 intron-3'utr CG33649 FlyBase G10670.1 GCTCTGCTTCTGGATGGCTGTGATCATGGCCGGGACTCGCAATCCCTGCTCTTAC 45 13831858 0.841147265 5 44 281 0.981132075 1.716003344 0.698113208 0.155555556 0.283018868 45 1 0 52 2L:13831830-13831884 7 CG33649 FBtr0091626 13831480 13832624 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L - 13831831 13831882 3'utr CG33649 FlyBase G8220.1 TCTGCTTCTGGATGGCTGTGATCATGGCCGGGACTCGCAATCCCTGCTCTTA 34 13831858 0.859863205 4 32 205 0.929824561 1.72427587 0.561403509 0.529411765 0.719298246 34 4 0 53 2L:13831831-13831882 7 38.5 162 FBgn0064115 259.7433333 20.19 30.89333333 0.148223246 1.906884596 1.246223565 -10 -10 -10 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 13831960 13831967 - 2L_13831960_13831967_- 0.650071002 0.649988565 0.650029783 5.83E-05 CG33649 FBtr0091626|FBtr0091626|FBtr0091626 13831480|13831480|13831480 13832624|13832624|13832624 2L - 13831945 13831991 5'utr CG33649 FlyBase G10671.1 TTGTGCAACCGACTGTCATAAGGTCTGTGATAGAGCTGGAAACTACC 41 13831968 0.738875031 8 35 257 0.85106383 1.124938737 0.468085106 0.146341463 0.255319149 41 5 2 40 2L:13831945-13831991 8 CG33649 FBtr0091626|FBtr0091626|FBtr0091626 13831480|13831480|13831480 13832624|13832624|13832624 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 13831947 13831982 5'utr CG33649 FlyBase G8221.1 CGACTGTCATAAGGTCTGTGATAGAGCTGGAAACTA 17 13831968 0.751527328 3 14 105 0.90625 1.161368002 0.09375 0.411764706 0.6875 17 2 1 29 2L:13831947-13831982 8 27.5 163 FBgn0064115 259.7433333 20.19 30.89333333 0.105873747 1.362060426 0.890159689 1 1 1 0.15 dme-bantam-3p 6mer3-8 TGATCT 2L 13899145 13899150 - 2L_13899145_13899150_- 0.996242997 0.992964707 0.994603852 0.002318108 Smg5 FBtr0080562 13898826 13899821 2L - 13899133 13899216 3'utr Smg5 FlyBase G10677.1 TGTACCATGTCGTATTCAAGATTTCGCATTTCCTGTGTCGGGCTGGACTATGGATCCAAAAACTCTTGATCTTTCCTGCAGTTG 20 13899150 0.787885031 11 20 153 1 1.342422681 0.136363636 0.1 0.181818182 20 0 0 22 2L:13899133-13899216 6 Smg5 FBtr0080562 13898826 13899821 TGATCT 6mer3-8 dme-bantam-3p 2L - 13899133 13899181 3'utr Smg5 FlyBase G8227.1 TGTCGGGCTGGACTATGGATCCAAAAACTCTTGATCTTTCCTGCAGTTG 9 13899150 0.979768736 4 9 61 1 1.079181246 0.083333333 0.222222222 0.416666667 9 0 0 12 2L:13899133-13899181 6 11 164 FBgn0019890 1083.97 27.57666667 42.05333333 0.010147882 0.398887949 0.261572606 0 0 0 0.15 dme-miR-1008-3p 6mer2-7 GCTGTG 2L 14048793 14048798 + 2L_14048793_14048798_+ 0.99824397 0.995290876 0.996767423 0.002088157 NimC4 FBtr0080592 14048763 14048863 2L + 14048771 14048818 3'utr NimC4 FlyBase G4599.1 CAGGTTCATCCCTTGGCGTTGGGCTGTGTTATATCAACATTGATTGTT 44 14048799 0.978310372 8 43 408 0.957446809 1.653212514 0 0.068181818 0.127659574 44 2 0 45 2L:14048771-14048818 6 NimC4 FBtr0080592 14048763 14048863 GCTGTG 6mer2-7 dme-miR-1008-3p 2L + 14048772 14048816 3'utr NimC4 FlyBase G3570.1 AGGTTCATCCCTTGGCGTTGGGCTGTGTTATATCAACATTGATTG 32 14048799 0.899308396 8 31 294 0.980769231 1.707570176 0.019230769 0.5 0.692307692 32 1 0 51 2L:14048772-14048816 6 37.5 165 FBgn0260011 2 0.196666667 0.31 18.75 190.6779661 120.9677419 -6 -6 -6 0.15 dme-miR-14-3p 6mer2-7 AGACTG 2L 14184939 14184944 - 2L_14184939_14184944_- 0.992708947 0.999931481 0.996320214 0.005107149 Dyrk2 FBtr0089290|FBtr0089289|FBtr0329933|FBtr0100448|FBtr0100447 14184476|14184476|14184476|14184476|14184476 14186137|14186137|14186065|14186137|14186137 2L - 14184927 14185000 3'utr Dyrk2 FlyBase G10700.1 AAGACGGCAGACAGTTTGATATGAACTTGAGCTGGGTAAGATTGCTTACCAAATCCAGACTGTAATTTGAACGA 9 14184947 0.97246596 6 9 57 1 1.041392685 0.545454545 0.222222222 0.363636364 9 0 0 11 2L:14184927-14185000 6 Dyrk2 FBtr0100447|FBtr0100448|FBtr0329933|FBtr0089289|FBtr0089290 14184476|14184476|14184476|14184476|14184476 14186137|14186137|14186065|14186137|14186137 AGACTG 6mer2-7 dme-miR-14-3p 2L - 14184910 14184968 3'utr Dyrk2 FlyBase G8244.1 TGGGTAAGATTGCTTACCAAATCCAGACTGTAATTTGAACGAAGTTTGTAACCTGTAAT 13 14184935 0.906287318 7 12 84 0.888888889 1.204119983 0.277777778 0.307692308 0.5 13 2 0 16 2L:14184910-14184968 6 7.5 166 FBgn0016930 948.1733333 27.29666667 41.49333333 0.007909946 0.274758823 0.180751928 3 -9 -3 0.15 dme-miR-33-5p 8mer-A1 CAATGCAA 2L 14185290 14185297 - 2L_14185290_14185297_- 0.622493518 0.621680676 0.622087097 0.000574736 Dyrk2 FBtr0089288|FBtr0089290|FBtr0089289|FBtr0329933|FBtr0100448|FBtr0100447 14185024|14184476|14184476|14184476|14184476|14184476 14186137|14186137|14186137|14186065|14186137|14186137 2L - 14185195 14185325 3'utr Dyrk2 FlyBase G10702.1 ACTACAGGAAATCAACTCTGTAGCCTGCCAATGCAAGATAAATTTGAATTCCGCTTGGATACATATACTTGATCCCATTAAACCAATCCATACGGAATACATGTCATAATTTAATGAAAACACATATTTAA 63 14185294 0.977292234 16 61 387 0.972222222 1.544068044 0.097222222 0.142857143 0.25 63 1 1 70 2L:14185195-14185325 8 Dyrk2 FBtr0100447|FBtr0100448|FBtr0329933|FBtr0089289|FBtr0089290|FBtr0089288 14184476|14184476|14184476|14184476|14184476|14185024 14186137|14186137|14186065|14186137|14186137|14186137 CAATGCAA 8mer-A1 dme-miR-33-5p 2L - 14185280 14185316 3'utr Dyrk2 FlyBase G8246.2 AATCAACTCTGTAGCCTGCCAATGCAAGATAAATTTG 33 14185294 0.951264222 4 32 165 1 1.763427994 0.362068966 0.515151515 0.724137931 33 0 0 58 2L:14185280-14185316 8 39 167 FBgn0016930 948.1733333 27.29666667 41.49333333 0.04113172 1.428745879 0.939910026 -3 -3 -3 0.15 dme-miR-7-5p 6mer2-7 TCTTCC 2L 14185712 14185717 - 2L_14185712_14185717_- 0.99784093 0.997765973 0.997803452 5.30E-05 Dyrk2 FBtr0089288|FBtr0089290|FBtr0089289|FBtr0329933|FBtr0100448|FBtr0336949|FBtr0100447 14185024|14184476|14184476|14184476|14184476|14185660|14184476 14186137|14186137|14186137|14186065|14186137|14186137|14186137 2L - 14185664 14185790 3'utr Dyrk2 FlyBase G10704.1 TATTTCGCTACTGCCATAGCTAAAGGTATTCAAAATCGTATTCACACCCACAAACCCTTCCTGAAAAGTATTCTCTTCCCTCCAACTCCCTCCATCCTTTTACACTGTATTCAAAATGAACAAACCA 467 14185715 0.984860647 17 458 3806 0.979890311 2.428134794 0.142595978 0.139186296 0.265082267 467 10 1 536 2L:14185664-14185790 6 Dyrk2 FBtr0100447|FBtr0336949|FBtr0100448|FBtr0329933|FBtr0089289|FBtr0089290|FBtr0089288 14184476|14185660|14184476|14184476|14184476|14184476|14185024 14186137|14186137|14186137|14186065|14186137|14186137|14186137 TCTTCC 6mer2-7 dme-miR-7-5p 2L - 14185688 14185739 3'utr Dyrk2 FlyBase G8249.1 AAACCCTTCCTGAAAAGTATTCTCTTCCCTCCAACTCCCTCCATCCTTTTAC 223 14185715 0.74952948 6 215 1746 0.968847352 1.714609139 0.130841121 0.349775785 0.548286604 223 5 5 311 2L:14185688-14185739 6 335.5 168 FBgn0016930 948.1733333 27.29666667 41.49333333 0.353838257 12.29087801 8.085636247 -2 -2 -2 0.15 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 14325959 14325966 + 2L_14325959_14325966_+ 0.624669229 0.625296418 0.624982823 0.000443497 wb FBtr0305063 14325709 14326280 2L + 14325937 14326000 3'utr wb FlyBase G4600.1 CACTCTCATGGGCAGACTGATTTAGCTTTAAGCTAGCGCATCTTGATCCTCAGATAACCGAAAC 27 14325980 0.755398847 5 26 185 0.967741935 1.477121255 0.161290323 0.148148148 0.258064516 27 1 0 30 2L:14325937-14326000 8 wb FBtr0305063 14325709 14326280 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L + 14325935 14325996 3'utr wb FlyBase G3572.1 TTCACTCTCATGGGCAGACTGATTTAGCTTTAAGCTAGCGCATCTTGATCCTCAGATAACCG 18 14325957 0.752506779 4 18 130 1 1.568201724 0.108108108 0.611111111 0.810810811 18 0 0 37 2L:14325935-14325996 8 15.5 169 FBgn0261563 1083 12.21333333 18.64 0.014312096 1.269104803 0.831545064 -21 2 -9.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2L 14327834 14327839 + 2L_14327834_14327839_+ 0.999916576 0.999793087 0.999854832 8.73E-05 wb FBtr0302732|FBtr0302732|FBtr0302732|FBtr0302734|FBtr0302734|FBtr0302734|FBtr0302731|FBtr0302731|FBtr0302731|FBtr0302733|FBtr0302733|FBtr0302733|FBtr0302735|FBtr0302735|FBtr0302735 14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750 14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262 2L + 14327814 14327918 3'utr wb FlyBase G4602.2 AAAACTTTTTCCAAATGTATTGTGATCAATAACGAGTTTAGAGCCACCTATTTATAGCCCTTCACTGCCATATAAGTTAGGTTACTGTAGGATTAGCTTTGAATG 113 14327833 0.861015229 16 103 969 0.916030534 1.602059991 0.083969466 0.123893805 0.244274809 113 9 2 120 2L:14327814-14327918 6 wb FBtr0302731|FBtr0302731|FBtr0302731|FBtr0302732|FBtr0302732|FBtr0302732|FBtr0302734|FBtr0302734|FBtr0302734|FBtr0302733|FBtr0302733|FBtr0302733|FBtr0302735|FBtr0302735|FBtr0302735 14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750 14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 14327782 14327860 3'utr wb FlyBase G3573.1 CGGGCGCATCTGGTTCCTGTTGACGCCACACCAAAACTTTTTCCAAATGTATTGTGATCAATAACGAGTTTAGAGCCAC 45 14327833 0.991308004 8 34 361 0.768115942 0.87917783 0 0.4 0.608695652 45 10 6 53 2L:14327782-14327860 6 49 170 FBgn0261563 1083 12.21333333 18.64 0.045244691 4.012008734 2.628755365 1 1 1 0.15 dme-miR-282-5p 6mer2-7 GAGGCT 2L 14345435 14345440 + 2L_14345435_14345440_+ 0.999495678 0.999756103 0.99962589 0.000184131 CG33090 FBtr0343673|FBtr0343675|FBtr0080624|FBtr0343674 14345339|14345339|14345339|14345339 14345795|14345795|14345790|14345790 2L + 14345416 14345485 3'utr CG33090 FlyBase G4608.1 TTAGTTCGATTCTTCTTTTGAGGCTGAATGTGTAACGAGCTTATCGAGATGGTGCGAGTCGAGGAAGATG 33 14345434 0.911428974 3 33 274 1 1.591064607 0.512820513 0.181818182 0.307692308 33 0 0 39 2L:14345416-14345485 6 CG33090 FBtr0343674|FBtr0080624|FBtr0343675|FBtr0343673 14345339|14345339|14345339|14345339 14345790|14345790|14345795|14345795 GAGGCT 6mer2-7 dme-miR-282-5p 2L + 14345394 14345483 3'utr CG33090 FlyBase G3578.1 AGCACAAAGATTTTCTTAGCGTTTAGTTCGATTCTTCTTTTGAGGCTGAATGTGTAACGAGCTTATCGAGATGGTGCGAGTCGAGGAAGA 40 14345434 0.987651497 8 38 336 0.984375 1.498310554 0.59375 0.375 0.609375 40 0 1 63 2L:14345394-14345483 6 27.5 171 FBgn0028916 435.3333333 15.55666667 24.00333333 0.063169985 1.767730876 1.145674212 1 1 1 0.15 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2L 14345611 14345616 + 2L_14345611_14345616_+ 0.624100784 0.515851569 0.569976176 0.076543743 CG33090 FBtr0343673|FBtr0343675|FBtr0080624|FBtr0343674 14345339|14345339|14345339|14345339 14345795|14345795|14345790|14345790 2L + 14345575 14345676 3'utr CG33090 FlyBase G4610.1 TTTAAAGCCAGTCACAAATCAAACTGCTACTCTCTGTTGAAGTACAACTACGCAATGGTATTCAAATGGAGCACAAGTCGTATTTAGATGTTAGCTAAGAGA 18 14345612 0.973984384 10 18 113 1 1.342422681 0.272727273 0.166666667 0.318181818 18 0 0 22 2L:14345575-14345676 6 CG33090 FBtr0343674|FBtr0080624|FBtr0343675|FBtr0343673 14345339|14345339|14345339|14345339 14345790|14345790|14345795|14345795 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2L + 14345562 14345626 3'utr CG33090 FlyBase G3580.1 TGTCTTCTCTAGCTTTAAAGCCAGTCACAAATCAAACTGCTACTCTCTGTTGAAGTACAACTACG 6 14345612 0.983750357 4 4 32 0.8 0.903089987 0.5 0.333333333 0.6 6 2 0 8 2L:14345562-14345626 6 6 172 FBgn0028916 435.3333333 15.55666667 24.00333333 0.013782542 0.385686737 0.249965283 -1 -1 -1 0.15 dme-miR-988-3p 6mer3-8 ACAAGG 2L 14365390 14365395 + 2L_14365390_14365395_+ 0.999975108 1 0.999987554 1.76E-05 spel1 FBtr0309281|FBtr0080630 14365229|14365229 14366840|14365568 2L + 14365340 14365416 5'utr spel1 FlyBase G4638.1 ACTGAATATTGCTCATCCATGGTTACAAACCATATTCTCCTGATTTGATTACAAGGCTACATCGAAAATGTTGTTTA 22 14365374 0.83156888 9 20 174 0.92 1.361727836 0.28 0.136363636 0.24 22 2 0 23 2L:14365340-14365416 6 spel1 FBtr0080630|FBtr0309281 14365229|14365229 14365568|14366840 ACAAGG 6mer3-8 dme-miR-988-3p 2L + 14365340 14365401 5'utr spel1 FlyBase G3596.1 ACTGAATATTGCTCATCCATGGTTACAAACCATATTCTCCTGATTTGATTACAAGGCTACAT 11 14365374 0.979894701 6 10 78 1 1.301029996 0.1 0.636363636 0.8 11 0 0 20 2L:14365340-14365401 6 4 173 FBgn0015546 654.7233333 24.05333333 36.85 0.006109451 0.166297118 0.108548168 16 16 16 0.15 dme-miR-317-3p 8mer-A1 TGTGTTCA 2L 15011511 15011518 + 2L_15011511_15011518_+ 0.631077318 0.631102815 0.631090066 1.80E-05 l(2)35Bd FBtr0080696 15011357 15011764 2L + 15011502 15011532 3'utr l(2)35Bd FlyBase G4656.1 ATGTTTGTTTGTGTTCATAGGTTTCAATTCA 45 15011510 0.73910665 3 45 557 1 1.698970004 0.08 0.111111111 0.2 45 0 0 50 2L:15011502-15011532 8 l(2)35Bd FBtr0080696 15011357 15011764 TGTGTTCA 8mer-A1 dme-miR-317-3p 2L + 15011500 15011531 3'utr l(2)35Bd FlyBase G3606.1 GTATGTTTGTTTGTGTTCATAGGTTTCAATTC 31 15011510 0.725946935 4 31 379 1 1.72427587 0.037735849 0.483870968 0.698113208 31 0 0 53 2L:15011500-15011531 8 38 174 FBgn0001974 148.6633333 10.34 15.90666667 0.255611112 3.675048356 2.388935457 1 1 1 0.15 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 15045019 15045024 - 2L_15045019_15045024_- 0.992478282 0.995980908 0.994229595 0.002476712 ck FBtr0080724|FBtr0080723|FBtr0343687 15044961|15044961|15044961 15045413|15045413|15045413 2L - 15045016 15045043 3'utr ck FlyBase G10744.1 CCTAACTGCATATCTGTACTGATGACGT 8 15045021 0.925497486 2 8 51 1 1.041392685 0 0.375 0.545454545 8 0 0 11 2L:15045016-15045043 6 ck FBtr0080723|FBtr0343687|FBtr0080724 15044961|15044961|15044961 15045413|15045413|15045413 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L - 15044973 15045040 3'utr ck FlyBase G8282.1 AACTGCATATCTGTACTGATGACGTTTTGTATCAAATACATAGAAATGTTCAATTATTTAATAAATTA 7 15045022 0.980708503 5 7 59 1 0.84509804 0 0 0 7 0 0 7 2L:15044973-15045040 6 6 175 FBgn0000317 907.6633333 14.81666667 22.80666667 0.006610381 0.404949381 0.26308097 -3 -2 -2.5 0.15 dme-miR-1002-5p 6mer3-8 CTACTT 2L 15063436 15063441 - 2L_15063436_15063441_- 0.878872138 0.788326834 0.833599486 0.064025196 vig FBtr0080718|FBtr0080721 15062929|15062929 15064433|15064433 2L - 15063406 15063456 3'utr vig FlyBase G10759.1 TATGCATCATATATACTACTTTTAATTATAAATACCTAACTGAACTTACAC 9 15063443 0.994900684 4 8 108 0.9 0.954242509 0.2 0.111111111 0.2 9 1 0 9 2L:15063406-15063456 6 vig FBtr0080721|FBtr0080718 15062929|15062929 15064433|15064433 CTACTT 6mer3-8 dme-miR-1002-5p 2L - 15063407 15063460 3'utr vig FlyBase G8289.1 GGACTATGCATCATATATACTACTTTTAATTATAAATACCTAACTGAACTTACA 7 15063445 0.815062517 5 6 51 0.888888889 0.903089987 0.555555556 0.142857143 0.333333333 7 1 0 8 2L:15063407-15063460 6 6 176 FBgn0024183 3911.293333 182.2033333 280.32 0.001534019 0.032930243 0.02140411 2 4 3 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2L 15064064 15064070 - 2L_15064064_15064070_- 0.823349553 0.823349426 0.823349489 1.41E-07 vig FBtr0080718|FBtr0080721 15062929|15062929 15064433|15064433 2L - 15064044 15064091 3'utr vig FlyBase G10763.1 AAGCAAGTGACCTCGTGTAAACTAGTCAGTGTCAGGCTAAGTTATCCT 10 15064069 0.795443369 5 10 62 1 1.079181246 0 0.2 0.333333333 10 0 0 12 2L:15064044-15064091 7 vig FBtr0080721|FBtr0080718 15062929|15062929 15064433|15064433 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 15064049 15064099 3'utr vig FlyBase G8290.1 TCGCGATCAAGCAAGTGACCTCGTGTAAACTAGTCAGTGTCAGGCTAAGTT 9 15064062 0.930467197 4 7 54 0.846153846 1.041392685 0.307692308 0.222222222 0.461538462 9 2 0 11 2L:15064049-15064099 7 8.5 177 FBgn0024183 3911.293333 182.2033333 280.32 0.002173194 0.046651177 0.030322489 -1 -8 -4.5 0.15 dme-miR-14-3p 6mer3-8 AAGACT 2L 15117761 15117766 + 2L_15117761_15117766_+ 0.899197453 0.996216718 0.947707086 0.068602934 stc FBtr0080705|FBtr0332474|FBtr0332473|FBtr0080706 15117654|15117654|15117654|15117654 15118069|15118069|15118069|15118069 2L + 15117738 15117794 3'utr stc FlyBase G4678.1 TGCAAATGGAAGCCTGGATGTGGAAGACTTATTGATTGAACCTAAATGAGGAAAATT 19 15117758 0.979937767 6 18 128 1 1.301029996 0.3 0.052631579 0.1 19 0 0 20 2L:15117738-15117794 6 stc FBtr0332473|FBtr0080706|FBtr0080705|FBtr0332474 15117654|15117654|15117654|15117654 15118069|15118069|15118069|15118069 AAGACT 6mer3-8 dme-miR-14-3p 2L + 15117743 15117816 3'utr stc FlyBase G3622.1 ATGGAAGCCTGGATGTGGAAGACTTATTGATTGAACCTAAATGAGGAAAATTTTGTGGATGCGCTGCGAGGACA 13 15117770 0.700741998 10 13 78 1 1.278753601 0.210526316 0.384615385 0.578947368 13 0 0 19 2L:15117743-15117816 6 12.5 178 FBgn0001978 2544.616667 74.99333333 115.5233333 0.004912331 0.166681483 0.108203249 3 -9 -3 0.15 dme-miR-1012-3p 7mer-A1 TGACTAA 2L 15504068 15504074 + 2L_15504068_15504074_+ 0.823344824 0.823349562 0.823347193 3.39E-06 lace FBtr0343735|FBtr0080738 15503914|15503914 15504591|15505018 2L + 15503931 15504149 3'utr lace FlyBase G4694.1 CATAGAAGTTAAGCTTGGGGAAATGGTAACCTCCCCGATTGGTAAACCAAAACTACAACACAGTCCAGATAGTGCTAAATCAATCACGAACGGTGGCTTACATTGACCAAGTTTCAGTTGCACTGGGCTTCTATTTATGACTAATTCTCTGGTTATATGCCTTAAAAGGGAAGATCACTACAGCAACAGAAACAAAACACTACAGCACATAGCTTAAAT 64 15504080 0.98263667 26 61 453 0.961038961 1.568201724 0.155844156 0.171875 0.311688312 64 2 1 74 2L:15503931-15504149 7 lace FBtr0343735|FBtr0080738 15503914|15503914 15504591|15505018 TGACTAA 7mer-A1 dme-miR-1012-3p 2L + 15503926 15504103 3'utr lace FlyBase G3637.1 ACACACATAGAAGTTAAGCTTGGGGAAATGGTAACCTCCCCGATTGGTAAACCAAAACTACAACACAGTCCAGATAGTGCTAAATCAATCACGAACGGTGGCTTACATTGACCAAGTTTCAGTTGCACTGGGCTTCTATTTATGACTAATTCTCTGGTTATATGCCTTAAAAGGGAAG 33 15504046 0.853527746 24 33 196 1 1.672097858 0.14893617 0.363636364 0.553191489 33 0 0 47 2L:15503926-15504103 7 12 179 FBgn0002524 4527.636667 202.88 309.75 0.002650389 0.059148265 0.03874092 -12 22 5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 15646806 15646811 - 2L_15646806_15646811_- 0.754152002 0.739864416 0.747008209 0.010102859 CG4587 FBtr0344778|FBtr0344778|FBtr0344778|FBtr0344775|FBtr0344775|FBtr0344775|FBtr0344773|FBtr0344773|FBtr0344773|FBtr0344774|FBtr0344774|FBtr0344774|FBtr0344776|FBtr0344776|FBtr0344776|FBtr0344777|FBtr0344777|FBtr0344777|FBtr0344779|FBtr0344779|FBtr0344779|FBtr0344780|FBtr0344780|FBtr0344780 15644181|15644181|15644181|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15644181|15644181|15644181|15646334|15646334|15646334|15646334|15646334|15646334 15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834 2L - 15646799 15646840 3'utr CG4587 FlyBase G10811.1 TGTAATCGTTCTAATTATTTTAGACTATACTGTGAGTTCTTT 10 15646804 0.985825752 2 9 85 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 2L:15646799-15646840 6 CG4587 FBtr0344779|FBtr0344779|FBtr0344779|FBtr0344780|FBtr0344780|FBtr0344780|FBtr0344776|FBtr0344776|FBtr0344776|FBtr0344777|FBtr0344777|FBtr0344777|FBtr0344773|FBtr0344773|FBtr0344773|FBtr0344774|FBtr0344774|FBtr0344774|FBtr0344778|FBtr0344778|FBtr0344778|FBtr0344775|FBtr0344775|FBtr0344775 15646334|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15644181|15644181|15644181|15646334|15646334|15646334|15646334|15646334|15646334|15644181|15644181|15644181|15646334|15646334|15646334 15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 15646777 15646822 3'utr CG4587 FlyBase G8318.1 TTTAGACTATACTGTGAGTTCTTTACGTTTCCTTTGTTAACTTATT 6 15646804 0.988047964 3 6 57 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 2L:15646777-15646822 6 7 180 FBgn0028863 451.99 9.723333333 14.98333333 0.015487068 0.719917724 0.467185762 -7 -7 -7 0.15 dme-miR-14-3p 6mer3-8 AAGACT 2L 15647128 15647133 - 2L_15647128_15647133_- 0.999999968 0.999209125 0.999604547 0.000559251 CG4587 FBtr0344778|FBtr0344775|FBtr0344773|FBtr0344774|FBtr0344776|FBtr0344777|FBtr0344779|FBtr0344780 15644181|15646334|15646334|15646334|15646334|15644181|15646334|15646334 15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834 2L - 15647112 15647146 3'utr CG4587 FlyBase G10812.1 ACTGAACAAATGGAAGACTTGAAATACCCGACAGC 5 15647122 0.903427731 2 4 20 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2L:15647112-15647146 6 CG4587 FBtr0344779|FBtr0344780|FBtr0344776|FBtr0344777|FBtr0344773|FBtr0344774|FBtr0344778|FBtr0344775 15646334|15646334|15646334|15644181|15646334|15646334|15644181|15646334 15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834 AAGACT 6mer3-8 dme-miR-14-3p 2L - 15647122 15647172 3'utr CG4587 FlyBase G8319.1 TTTACAACCAAAACTAAATCGAATTCACTGAACAAATGGAAGACTTGAAAT 6 15647136 0.94121709 3 5 26 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 2L:15647122-15647172 6 4.5 181 FBgn0028863 451.99 9.723333333 14.98333333 0.009955972 0.462804251 0.300333704 -11 3 -4 0.15 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 15727656 15727663 - 2L_15727656_15727663_- 0.625359232 0.625357584 0.625358408 1.13E-06 CycE FBtr0080777|FBtr0080776|FBtr0080773 15727579|15727579|15727579 15728880|15728880|15728880 2L - 15727607 15727688 3'utr CycE FlyBase G10821.1 ATTTAATTTTAAATAATTTCAGAACTACGCTTATATCCATGATTTGATGTTAATAAATAAACGATCGCAAAATCGTAAACTA 23 15727663 0.975729288 8 23 158 1 1.544068044 0.028571429 0.391304348 0.6 23 0 0 35 2L:15727607-15727688 8 CycE FBtr0080776|FBtr0080773|FBtr0080777 15727579|15727579|15727579 15728880|15728880|15728880 TACGCTTA 8mer-A1 dme-miR-965-3p 2L - 15727638 15727674 3'utr CycE FlyBase G8325.1 AATTTCAGAACTACGCTTATATCCATGATTTGATGTT 9 15727663 0.960119302 4 8 60 1 0.954242509 0.111111111 0 0 9 0 0 9 2L:15727638-15727674 8 14 182 FBgn0010382 855.2666667 26.80666667 41.17666667 0.016369164 0.522258145 0.339998381 0 0 0 0.15 dme-miR-317-3p 7mer-A1 GTGTTCA 2L 15727818 15727824 - 2L_15727818_15727824_- 0.823348287 0.823349562 0.823348925 9.19E-07 CycE FBtr0080775|FBtr0080777|FBtr0080774|FBtr0080776|FBtr0305561|FBtr0080773 15727782|15727579|15727782|15727579|15727782|15727579 15728880|15728880|15728880|15728880|15728880|15728880 2L - 15727797 15727852 3'utr CycE FlyBase G10822.1 CGTTAGCTTAGGCATAAATAACATGTAAGTGTTCATACGATTAAGGCTGGATTGAA 14 15727813 0.67459831 7 11 88 0.8125 0.812913357 0.0625 0.142857143 0.25 14 2 1 13 2L:15727797-15727852 7 CycE FBtr0080774|FBtr0080776|FBtr0305561|FBtr0080773|FBtr0080775|FBtr0080777 15727782|15727579|15727782|15727579|15727782|15727579 15728880|15728880|15728880|15728880|15728880|15728880 GTGTTCA 7mer-A1 dme-miR-317-3p 2L - 15727799 15727843 3'utr CycE FlyBase G8326.1 AGGCATAAATAACATGTAAGTGTTCATACGATTAAGGCTGGATTG 20 15727828 0.791528631 8 13 140 0.68 1.230448921 0.24 0.2 0.36 20 8 0 17 2L:15727799-15727843 7 15 183 FBgn0010382 855.2666667 26.80666667 41.17666667 0.01753839 0.559562298 0.36428398 -11 4 -3.5 0.15 dme-bantam-3p 6mer3-8 TGATCT 2L 15765909 15765914 + 2L_15765909_15765914_+ 0.996201714 0.999899879 0.998050796 0.002615022 CG3793 FBtr0080761|FBtr0305560 15765710|15765710 15766123|15766267 2L + 15765881 15765936 3'utr CG3793 FlyBase G4713.1 TTATCCTACACAGAGACCCACTCACAAATGATCTAATTTGTATTAATTTAGTTGTT 72 15765909 0.982706057 6 70 523 0.976470588 1.618048097 0.235294118 0.152777778 0.282352941 72 1 1 83 2L:15765881-15765936 6 CG3793 FBtr0080761|FBtr0305560 15765710|15765710 15766123|15766267 TGATCT 6mer3-8 dme-bantam-3p 2L + 15765888 15765934 3'utr CG3793 FlyBase G3654.1 ACACAGAGACCCACTCACAAATGATCTAATTTGTATTAATTTAGTTG 40 15765909 0.950972225 5 39 276 1 1.755874856 0.315789474 0.3 0.50877193 40 0 0 57 2L:15765888-15765934 6 54.5 184 FBgn0028507 251.2366667 19.03666667 29.20666667 0.216926935 2.862896165 1.866012326 0 0 0 0.15 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 2L 1594849 1594856 - 2L_1594849_1594856_- 0.625359921 0.62494401 0.625151965 0.000294086 CG31935 FBtr0077916 1594820 1595042 2L - 1594845 1594882 3'utr CG31935 FlyBase G6814.1 AATCATGCTACTCAAATTGGTGTTATTGGTGCTATGCA 48 1594857 0.784968798 6 47 417 0.982758621 1.755874856 0.224137931 0.145833333 0.293103448 48 1 0 57 2L:1594845-1594882 8 CG31935 FBtr0077916 1594820 1595042 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 2L - 1594845 1594878 3'utr CG31935 FlyBase G5325.1 ATGCTACTCAAATTGGTGTTATTGGTGCTATGCA 31 1594857 0.666701911 2 27 256 0.886363636 0.892094603 0.25 0.290322581 0.5 31 1 4 39 2L:1594845-1594878 8 39 185 FBgn0051935 254.24 10.08666667 15.46333333 0.153398364 3.866490416 2.522095279 1 1 1 0.15 dme-miR-252-5p 8mer-m1 GTACTTAG 2L 16040344 16040351 + 2L_16040344_16040351_+ 0.635357473 0.635343117 0.635350295 1.02E-05 beat-Ic FBtr0343727|FBtr0080801|FBtr0343726 16039529|16039529|16039529 16041703|16040407|16041703 2L + 16040319 16040374 3'utr beat-Ic FlyBase G4730.1 GTGCTCAGTCACTGAAAATCAAAATGTACTTAGAATAAATACTATGTACTTCAAAC 11 16040343 0.96332242 3 10 64 1 1.041392685 0 0 0 11 0 0 11 2L:16040319-16040374 8 beat-Ic FBtr0343726|FBtr0080801|FBtr0343727 16039529|16039529|16039529 16041703|16040407|16041703 GTACTTAG 8mer-m1 dme-miR-252-5p 2L + 16040330 16040376 3'utr beat-Ic FlyBase G3665.1 CTGAAAATCAAAATGTACTTAGAATAAATACTATGTACTTCAAACTC 6 16040343 0.974847067 2 6 36 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2L:16040330-16040376 8 7 186 FBgn0028644 8.996666667 0.243333333 0.383333333 0.77806595 28.76712329 18.26086957 1 1 1 0.15 dme-bantam-3p 6mer3-8 TGATCT 2L 16245846 16245851 - 2L_16245846_16245851_- 0.995075425 0.990685862 0.992880644 0.003103845 PRL-1 FBtr0332358|FBtr0080856|FBtr0080857|FBtr0332357 16245833|16245833|16245833|16245833 16247074|16247074|16247074|16247074 2L - 16245829 16245885 3'utr PRL-1 FlyBase G10852.1 TTTTAAAATGTTAGTCATTACAAGGAAATAAAAATGATCTATATTAAAATTAACCAA 108 16245851 0.839246314 10 107 690 0.992 2.093421685 0.024 0.148148148 0.264 108 1 0 124 2L:16245829-16245885 6 PRL-1 FBtr0332357|FBtr0080857|FBtr0080856|FBtr0332358 16245833|16245833|16245833|16245833 16247074|16247074|16247074|16247074 TGATCT 6mer3-8 dme-bantam-3p 2L - 16245830 16245881 3'utr PRL-1 FlyBase G8347.1 AAAATGTTAGTCATTACAAGGAAATAAAAATGATCTATATTAAAATTAACCA 69 16245851 0.848801118 6 66 436 0.966292135 1.633468456 0.078651685 0.260869565 0.426966292 69 2 1 86 2L:16245830-16245881 6 83 187 FBgn0024734 9266.433333 401.94 617.5566667 0.00895706 0.206498482 0.134400622 0 0 0 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 16246491 16246498 - 2L_16246491_16246498_- 0.498552065 0.498776971 0.498664518 0.000159028 PRL-1 FBtr0332358|FBtr0080856|FBtr0080857|FBtr0332357 16245833|16245833|16245833|16245833 16247074|16247074|16247074|16247074 2L - 16246386 16246523 3'utr PRL-1 FlyBase G10854.1 CATCTATATTCTAAAACTGTAAAATGTACTTAATCGCATATTAGTTTGAAGCTCAGCCCTCAAAAATTTGCATTATTTATATTTTGTTTTTTATCTTCTTTTCACTTCGTCCACTTTTCGCTATCAATGGGTGAAGGC 216 16246499 0.982459859 10 214 1606 0.988549618 2.413299764 0.053435115 0.171296296 0.316793893 216 3 0 259 2L:16246386-16246523 8 PRL-1 FBtr0332357|FBtr0080857|FBtr0080856|FBtr0332358 16245833|16245833|16245833|16245833 16247074|16247074|16247074|16247074 GTACTTAA 8mer-A1 dme-miR-252-5p 2L - 16246462 16246519 3'utr PRL-1 FlyBase G8350.1 TATATTCTAAAACTGTAAAATGTACTTAATCGCATATTAGTTTGAAGCTCAGCCCTCA 153 16246499 0.972799835 4 149 1111 0.980952381 1.836745966 0.052380952 0.274509804 0.471428571 153 2 2 206 2L:16246462-16246519 8 178 188 FBgn0024734 9266.433333 401.94 617.5566667 0.019209117 0.442852167 0.288232659 1 1 1 0.15 dme-miR-278-3p 6mer3-8 CCCACC 2L 16247046 16247051 - 2L_16247046_16247051_- 0.950764054 0.953963254 0.952363654 0.002262176 PRL-1 FBtr0332358|FBtr0080856|FBtr0080857|FBtr0332357 16245833|16245833|16245833|16245833 16247074|16247074|16247074|16247074 2L - 16246892 16247134 stop_codon PRL-1 FlyBase G10856.1 AAGCCAAAGGCGAGACTAAAGCACAAAAATGGTCATAAGAATTCATGTTCTGTGCAATAGATTTCCAACACCATATGTATATTCCCACCAGACAAAAAGTGTTCATTTTTTCAAAAACAAAAAAAAAAAATGCAAGCGGATAGAAAAGCGCATACACAAATATGAATTGATAGGCAGCAATCCGTAAAATTGAACTAACCACAGAGAGCCCAAAAATATGGAAGGAGAAATTGAGTTACAGCC 175 16247053 0.98599814 31 153 1335 0.874371859 1.939519253 0.08040201 0.125714286 0.231155779 175 24 1 174 2L:16246892-16247134 6 PRL-1 FBtr0332357|FBtr0080857|FBtr0080856|FBtr0332358 16245833|16245833|16245833|16245833 16247074|16247074|16247074|16247074 CCCACC 6mer3-8 dme-miR-278-3p 2L - 16247021 16247177 stop_codon PRL-1 FlyBase G8352.1 CGGAGCCATTAATGCCAAGCAGCTGTCCTTTTTGGAAAAATACAAGCCAAAGGCGAGACTAAAGCACAAAAATGGTCATAAGAATTCATGTTCTGTGCAATAGATTTCCAACACCATATGTATATTCCCACCAGACAAAAAGTGTTCATTTTTTCAA 131 16247053 0.952278126 24 105 1068 0.811428571 1.374137094 0.137142857 0.27480916 0.457142857 131 28 5 142 2L:16247021-16247177 6 114.5 189 FBgn0024734 9266.433333 401.94 617.5566667 0.012356426 0.284868388 0.185408087 2 2 2 0.15 dme-miR-307a-3p 7mer-A1 GTTGTGA 2L 16260057 16260063 - 2L_16260057_16260063_- 0.821762732 0.82216371 0.821963221 0.00028355 twe FBtr0331445|FBtr0331444|FBtr0080855|FBtr0331446 16259412|16259875|16259412|16259875 16260224|16260224|16260224|16260224 2L - 16260045 16260091 3'utr twe FlyBase G10871.1 GGTTCATTTCTTGTTGCGTTGTTCAAATGTTGTGAAAGCACTTTATA 19 16260062 0.984895325 4 19 164 1 1.361727836 0.652173913 0.210526316 0.347826087 19 0 0 23 2L:16260045-16260091 7 twe FBtr0080855|FBtr0331446|FBtr0331445|FBtr0331444 16259412|16259875|16259412|16259875 16260224|16260224|16260224|16260224 GTTGTGA 7mer-A1 dme-miR-307a-3p 2L - 16260042 16260076 3'utr twe FlyBase G8366.1 GCGTTGTTCAAATGTTGTGAAAGCACTTTATATTT 10 16260062 0.677341797 4 10 74 1 1.255272505 0.722222222 0.6 0.777777778 10 0 0 18 2L:16260042-16260076 7 14.5 190 FBgn0002673 160.84 8.683333333 13.39 0.090151704 1.669865643 1.082897685 -1 -1 -1 0.15 dme-miR-980-5p 6mer2-7 AAAAAC 2L 16264630 16264635 - 2L_16264630_16264635_- 0.842053224 0.983482433 0.912767828 0.100005546 crp FBtr0343814|FBtr0080854 16263554|16264419 16265520|16265520 2L - 16264597 16264701 3'utr crp FlyBase G10879.1 TTTGAACGTTGAACGAGATGCCGAAATTGTTTAAGCATGTTTAATTGATGATTCCTTGAACTCTATAAAAACCATCGCATTAATTTTTACCTTTTTTTAAATTAT 26 16264646 0.981888561 11 26 196 1 1.51851394 0.454545455 0.115384615 0.303030303 26 0 0 33 2L:16264597-16264701 6 crp FBtr0343814|FBtr0080854 16263554|16264419 16265520|16265520 AAAAAC 6mer2-7 dme-miR-980-5p 2L - 16264603 16264666 3'utr crp FlyBase G8374.1 CATGTTTAATTGATGATTCCTTGAACTCTATAAAAACCATCGCATTAATTTTTACCTTTTTTTA 13 16264645 0.97451474 6 12 120 0.928571429 1.113943352 0.214285714 0.076923077 0.142857143 13 1 0 13 2L:16264603-16264666 6 11 191 FBgn0001994 2020.376667 59.00666667 90.54333333 0.005444529 0.186419614 0.12148879 11 10 10.5 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2L 16265188 16265193 - 2L_16265188_16265193_- 0.972356468 0.987275725 0.979816097 0.010549467 crp FBtr0343814|FBtr0080854 16263554|16264419 16265520|16265520 2L - 16265152 16265242 3'utr crp FlyBase G10884.1 TAGTAGCATCATCAGCAGCAGCAGCCACAGAAATGTTAAAGAGACTGTTACCAAACAGAGGCAGAGGCAAAAGAATGTAAATTAGTAAGAG 54 16265195 0.865602634 10 53 219 0.985294118 1.525044807 0.117647059 0.203703704 0.367647059 54 0 1 67 2L:16265152-16265242 6 crp FBtr0343814|FBtr0080854 16263554|16264419 16265520|16265520 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 16265146 16265265 3'utr crp FlyBase G8375.1 AACCTTATTGTAAGCAGTAAAACTAGTAGCATCATCAGCAGCAGCAGCCACAGAAATGTTAAAGAGACTGTTACCAAACAGAGGCAGAGGCAAAAGAATGTAAATTAGTAAGAGTTTAAC 48 16265195 0.95831287 10 44 215 0.9375 1.301029996 0.15625 0.270833333 0.453125 48 2 2 60 2L:16265146-16265265 6 39 192 FBgn0001994 2020.376667 59.00666667 90.54333333 0.019303331 0.660942266 0.430732982 2 2 2 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 2L 16290916 16290922 + 2L_16290916_16290922_+ 0.782525151 0.781740727 0.782132939 0.000554725 pkaap FBtr0080826 16290778 16291195 2L + 16290875 16290957 3'utr pkaap FlyBase G4749.1 AGAAGTCGCAACAGAAGCTCTCTCTAGTACCCTCTCCTTATGTACAAATTGTGTTGAACAAATCAAATACTTTACTTTAACTT 30 16290914 0.98682668 10 29 249 0.972972973 1.255272505 0.081081081 0.166666667 0.324324324 30 0 1 36 2L:16290875-16290957 7 pkaap FBtr0080826 16290778 16291195 GTACAAA 7mer-A1 dme-miR-305-5p 2L + 16290878 16290942 3'utr pkaap FlyBase G3682.1 AGTCGCAACAGAAGCTCTCTCTAGTACCCTCTCCTTATGTACAAATTGTGTTGAACAAATCAAAT 31 16290914 0.98586447 9 30 254 0.976190476 1.311753861 0.357142857 0.258064516 0.452380952 31 0 1 41 2L:16290878-16290942 7 26.5 193 FBgn0040079 291.3133333 14.45 22.03666667 0.090967343 1.833910035 1.202541219 2 2 2 0.15 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 16296371 16296378 - 2L_16296371_16296378_- 0.62521416 0.624422214 0.624818187 0.000560029 heix FBtr0080852 16296049 16297554 2L - 16296364 16296398 3'utr heix FlyBase G10902.1 AGCGTATGCATATAAACAAATAGCTTTAAATAACA 8 16296378 0.865181327 2 6 49 0.75 0.77815125 0 0 0 8 2 0 6 2L:16296364-16296398 8 heix FBtr0080852 16296049 16297554 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 16296360 16296401 3'utr heix FlyBase G8388.1 AATAGCGTATGCATATAAACAAATAGCTTTAAATAACAAACA 10 16296378 0.902756392 2 9 55 0.909090909 0.698970004 0 0.1 0.181818182 10 0 1 10 2L:16296360-16296401 8 9 194 FBgn0028375 808.1233333 31.42 48.33666667 0.011136914 0.286441757 0.186194056 0 0 0 0.15 dme-miR-190-5p 7mer-m8 ACATATC 2L 16297344 16297350 - 2L_16297344_16297350_- 0.673995683 0.673234457 0.67361507 0.00053825 heix FBtr0080852 16296049 16297554 2L - 16297328 16297398 3'utr heix FlyBase G10905.1 ATTTCGAATGCTGCTAGTCGCCCGTTTGATTCTAAACTTTTGAACTGAACATATCCTAGCCCTAATGGGTC 15 16297342 0.864212075 6 15 92 1 1.278753601 0.052631579 0.266666667 0.421052632 15 0 0 19 2L:16297328-16297398 7 heix FBtr0080852 16296049 16297554 ACATATC 7mer-m8 dme-miR-190-5p 2L - 16297326 16297387 3'utr heix FlyBase G8390.1 TGCTAGTCGCCCGTTTGATTCTAAACTTTTGAACTGAACATATCCTAGCCCTAATGGGTCGA 9 16297343 0.820352521 4 7 65 1 1.204119983 0.0625 0.555555556 0.75 9 0 0 16 2L:16297326-16297387 7 8.5 195 FBgn0028375 808.1233333 31.42 48.33666667 0.010518196 0.270528326 0.175849941 -8 -7 -7.5 0.15 dme-miR-92b-3p 7mer-m8 GTGCAAT 2L 16297495 16297501 - 2L_16297495_16297501_- 0.658129054 0.631371228 0.644750141 0.018920693 heix FBtr0080852 16296049 16297554 2L - 16297455 16297520 3'utr heix FlyBase G10906.1 CTGAATCAGTGAGAACCTGGTGCAATGTTTTAGGGAATTTCATTAGGTTTTAGTCAATGTGAGTAA 12 16297502 0.980502958 7 10 76 0.833333333 0.698970004 0.333333333 0 0 12 1 1 10 2L:16297455-16297520 7 heix FBtr0080852 16296049 16297554 GTGCAAT 7mer-m8 dme-miR-92b-3p 2L - 16297499 16297549 3'utr heix FlyBase G8391.1 GGGTTAAACGTACGGATCTGGCGGAAAATCTGAATCAGTGAGAACCTGGTG 5 16297518 0.973126781 3 3 27 0.833333333 0.698970004 0.166666667 0.2 0.333333333 5 1 0 5 2L:16297499-16297549 2 5 196 FBgn0028375 808.1233333 31.42 48.33666667 0.006187174 0.159134309 0.103441142 1 17 9 0.15 dme-miR-31a-5p 7mer-A1 CTTGCCA 2L 16301756 16301762 - 2L_16301756_16301762_- 0.814657869 0.65321547 0.733936669 0.114157016 CG5869 FBtr0080851 16301654 16302076 2L - 16301720 16301781 3'utr CG5869 FlyBase G10913.1 AATCTTAATAGAAGCTGTGCTTGCCAAATTTCTACATGTATTTATTGTAAAGATATAAAAGC 16 16301760 0.723374332 9 16 117 1 1.397940009 0.04 0.375 0.6 16 0 0 25 2L:16301720-16301781 7 CG5869 FBtr0080851 16301654 16302076 CTTGCCA 7mer-A1 dme-miR-31a-5p 2L - 16301741 16301819 3'utr CG5869 FlyBase G8394.1 GGAGTTTTTAGTGATTTTAGTTCTTGCATTTAAGTAATAATCTTAATAGAAGCTGTGCTTGCCAAATTTCTACATGTAT 14 16301760 0.772567062 7 14 130 1 1.342422681 0.181818182 0.428571429 0.636363636 14 0 0 22 2L:16301741-16301819 7 10 197 FBgn0028894 1010.62 123.5733333 189.1366667 0.009894916 0.080923608 0.052871821 -2 -2 -2 0.15 dme-bantam-3p 6mer2-7 GATCTC 2L 16302062 16302067 - 2L_16302062_16302067_- 0.956416922 0.978142717 0.967279819 0.015362461 CG5869 FBtr0080851 16301654 16302076 2L - 16302032 16302133 stop_codon CG5869 FlyBase G10914.2 GAGATACGCGAACTAGACGAACTCACCGAGGAGTGGCTGAAAGCCAAGCTCAAGTAGAGAGGTTTCGATCTCTGGGATCAATCAATCCGGGCCGTTGTCAAA 92 16302061 0.948172567 10 87 525 0.939130435 1.556302501 0.4 0.239130435 0.391304348 92 5 2 108 2L:16302032-16302133 6 CG5869 FBtr0080851 16301654 16302076 GATCTC 6mer2-7 dme-bantam-3p 2L - 16302028 16302167 stop_codon CG5869 FlyBase G8396.1 TCTTCAGCGCGAAGTAGATCTCACACGCGTCTACGAGATACGCGAACTAGACGAACTCACCGAGGAGTGGCTGAAAGCCAAGCTCAAGTAGAGAGGTTTCGATCTCTGGGATCAATCAATCCGGGCCGTTGTCAAAAGCA 88 16302061 0.97275659 11 85 478 0.96350365 2.120573931 0.284671533 0.409090909 0.620437956 88 5 0 132 2L:16302028-16302167 6 66 198 FBgn0028894 1010.62 123.5733333 189.1366667 0.065306446 0.534095814 0.348954019 -6 -6 -6 0.15 dme-miR-304-5p 7mer-m8 TGAGATT 2L 16305881 16305887 - 2L_16305881_16305887_- 0.619507807 0.62020336 0.619855583 0.000491863 CG5861 FBtr0080850 16305799 16305958 2L - 16305848 16305907 3'utr CG5861 FlyBase G10918.1 TTTGGTGTTGTCAGAGAAATTGAGATTTTGTAACAAAGACAACAATTACGGTTTAGAGAA 19 16305887 0.826703406 6 18 135 1 1.431363764 0.37037037 0.315789474 0.518518519 19 0 0 27 2L:16305848-16305907 7 CG5861 FBtr0080850 16305799 16305958 TGAGATT 7mer-m8 dme-miR-304-5p 2L - 16305874 16305904 3'utr CG5861 FlyBase G8398.1 GGTGTTGTCAGAGAAATTGAGATTTTGTAAC 5 16305888 0.800498582 2 5 45 1 0.84509804 0.571428571 0.4 0.571428571 5 0 0 7 2L:16305874-16305904 7 9.5 199 FBgn0015338 312.2366667 33.98666667 51.41 0.030425639 0.279521381 0.184788952 0 1 0.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 16309163 16309168 + 2L_16309163_16309168_+ 0.988350322 0.960783853 0.974567088 0.019492388 Syx5 FBtr0080832|FBtr0080831 16309130|16309130 16309274|16309274 2L + 16309123 16309197 stop_codon Syx5 FlyBase G4760.1 ATGTCGTAATCAAACGCCAGTTGCCCATTAAAAGCCCCATGTACCTATCCATGTATACAGCTTTTTATTTTAATC 22 16309162 0.960240976 6 22 110 1 1.414973348 0 0.181818182 0.307692308 22 0 0 26 2L:16309123-16309197 6 Syx5 FBtr0080832|FBtr0080831 16309130|16309130 16309274|16309274 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 16309136 16309183 3'utr Syx5 FlyBase G3691.1 ACGCCAGTTGCCCATTAAAAGCCCCATGTACCTATCCATGTATACAGC 16 16309162 0.953664802 2 14 60 1 1.278753601 0.052631579 0.266666667 0.421052632 15 0 0 19 2L:16309136-16309183 6 17 200 FBgn0011708 839 57.82 88.43666667 0.020262217 0.294015911 0.19222796 1 1 1 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2L 16309761 16309766 - 2L_16309761_16309766_- 0.980373558 0.994531897 0.987452728 0.01001143 cni FBtr0080848|FBtr0080849|FBtr0337082 16309594|16309594|16309290 16309902|16309902|16309902 2L - 16309728 16309781 3'utr cni FlyBase G10925.1 ACTTCACTTGTAAATTCTAGTGTAAATCCATAAAGACATCTTGAAGCTTTGTTT 14 16309767 0.986721575 4 14 120 1 1.255272505 0 0.285714286 0.444444444 14 0 0 18 2L:16309728-16309781 6 cni FBtr0080849|FBtr0337082|FBtr0080848 16309594|16309290|16309594 16309902|16309902|16309902 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2L - 16309729 16309776 3'utr cni FlyBase G8401.1 ACTTGTAAATTCTAGTGTAAATCCATAAAGACATCTTGAAGCTTTGTT 12 16309767 0.784609783 4 12 93 1 1.204119983 0 0.333333333 0.5 12 0 0 16 2L:16309729-16309776 6 10.5 201 FBgn0000339 410.67 56.70333333 85.98333333 0.025567974 0.185174299 0.122116689 1 1 1 0.15 dme-bantam-3p 7mer-A1 GATCTCA 2L 16309879 16309885 - 2L_16309879_16309885_- 0.823329793 0.823132395 0.823231094 0.000139583 cni FBtr0080848|FBtr0080849|FBtr0337082 16309594|16309594|16309290 16309902|16309902|16309902 2L - 16309857 16309924 stop_codon cni FlyBase G10926.1 TTATTCGCTCATCTCGACATAGGCAAGCTCTTGCCTGGGGATCTCAGTGTTGGCGCCAACGCATCAGC 32 16309877 0.98253826 7 29 219 0.891891892 1.51851394 0.081081081 0.15625 0.27027027 32 4 0 33 2L:16309857-16309924 7 cni FBtr0080849|FBtr0337082|FBtr0080848 16309594|16309290|16309594 16309902|16309902|16309902 GATCTCA 7mer-A1 dme-bantam-3p 2L - 16309861 16309919 stop_codon cni FlyBase G8402.1 CGCTCATCTCGACATAGGCAAGCTCTTGCCTGGGGATCTCAGTGTTGGCGCCAACGCAT 33 16309877 0.919761546 5 31 218 0.962962963 1.414973348 0.018518519 0.545454545 0.722222222 33 1 1 52 2L:16309861-16309919 7 28 202 FBgn0000339 410.67 56.70333333 85.98333333 0.068181265 0.493798131 0.325644505 -8 -8 -8 0.15 dme-miR-305-3p 7mer-m8 ATGTGCC 2L 16312998 16313004 + 2L_16312998_16313004_+ 0.674481787 0.674515646 0.674498716 2.39E-05 fzy FBtr0080833 16312826 16313097 2L + 16312976 16313019 3'utr fzy FlyBase G4772.1 AATTACGGATAAATCTCTGATTATGTGCCCCCGCCGACGATATA 7 16312992 0.979340395 4 6 46 0.888888889 0.903089987 0.222222222 0.142857143 0.333333333 7 1 0 8 2L:16312976-16313019 7 fzy FBtr0080833 16312826 16313097 ATGTGCC 7mer-m8 dme-miR-305-3p 2L + 16312969 16313021 3'utr fzy FlyBase G3699.1 ACTTTGTAATTACGGATAAATCTCTGATTATGTGCCCCCGCCGACGATATATG 8 16312994 0.972907743 6 7 45 1 0.954242509 0.333333333 0.125 0.222222222 8 0 0 9 2L:16312969-16313021 7 5.5 203 FBgn0001086 1113.016667 67.49 102.82 0.004941525 0.081493555 0.053491539 6 4 5 0.15 dme-miR-252-5p 7mer-m8 GTACTTA 2L 16313186 16313192 - 2L_16313186_16313192_- 0.587685031 0.585871269 0.58677815 0.00128248 cact FBtr0337081|FBtr0080844|FBtr0080845|FBtr0080847 16313095|16313095|16313034|16313095 16313378|16313378|16313378|16313378 2L - 16313141 16313216 3'utr cact FlyBase G10928.1 TGCATCCAGGAAATGGAACCTTATGTACTTACTGTCCCGGCACGTGGGAATCCGAAACGAATAGAATTCCTTGTGT 120 16313193 0.983688937 6 118 919 0.985815603 2.1430148 0.14893617 0.166666667 0.290780142 120 2 0 139 2L:16313141-16313216 7 cact FBtr0080847|FBtr0337081|FBtr0080844|FBtr0080845 16313095|16313095|16313095|16313034 16313378|16313378|16313378|16313378 GTACTTA 7mer-m8 dme-miR-252-5p 2L - 16313166 16313209 3'utr cact FlyBase G8404.1 AGGAAATGGAACCTTATGTACTTACTGTCCCGGCACGTGGGAAT 68 16313193 0.723457135 4 64 523 0.949494949 1.973127854 0.212121212 0.352941176 0.555555556 68 5 0 94 2L:16313166-16313209 7 92 204 FBgn0000250 1526.01 89.34 137.2866667 0.06028794 1.029773897 0.670130627 1 1 1 0.15 dme-miR-184-3p 6mer2-7 CCGTCC 2L 16354263 16354268 + 2L_16354263_16354268_+ 0.999884135 0.999899461 0.999891798 1.09E-05 CG4455 FBtr0080836 16353552 16354539 2L + 16354168 16354436 3'utr CG4455 FlyBase G4781.1 ACGCAACCCAATTTGCATTAAGAATCCGAATCGTACTAACAGACGAACTCTTCGTGATGCCTCGAATTTTGCACTACATTTTAAAACGCCGATTCCCGTCCCTTTATATACACAGGTTGTACTTAAATCGAAACCAAGTACTTAATAATTGTACCATGCCAATCATAGTTTAAGCGCCAATCTGCCGCCACGAATACATTTAAGAAATCTTCAGTTTGTGCATTTAGACCAGCATGAGTATCCTTCTATATATTGTGTCAAAAAAAACG 505 16354260 0.976422367 41 484 3115 0.953895072 1.93305321 0.06200318 0.194059406 0.352941176 505 23 6 600 2L:16354168-16354436 6 CG4455 FBtr0080836 16353552 16354539 CCGTCC 6mer2-7 dme-miR-184-3p 2L + 16354204 16354396 3'utr CG4455 FlyBase G3707.1 TAACAGACGAACTCTTCGTGATGCCTCGAATTTTGCACTACATTTTAAAACGCCGATTCCCGTCCCTTTATATACACAGGTTGTACTTAAATCGAAACCAAGTACTTAATAATTGTACCATGCCAATCATAGTTTAAGCGCCAATCTGCCGCCACGAATACATTTAAGAAATCTTCAGTTTGTGCATTTAGAC 352 16354260 0.914340584 26 330 2000 0.940839695 1.613665673 0.041984733 0.372159091 0.578244275 352 20 11 493 2L:16354204-16354396 6 303.5 205 FBgn0028506 237.38 18.83333333 28.63666667 1.278540736 16.11504425 10.59830055 3 3 3 0.15 dme-miR-14-3p 6mer3-8 AAGACT 2L 16400240 16400245 - 2L_16400240_16400245_- 0.982585585 0.999618949 0.991102267 0.012044362 CG5888 FBtr0340234|FBtr0080880 16400173|16400173 16400500|16400500 2L - 16400198 16400378 3'utr CG5888 FlyBase G10973.1 CTTAAAATTAATACTCCCATATATGTTCACCTGCTAAGTATCTTTTGAAATATAACACGATTTGTATCTTTAGTGTAAAAGTTTTGAAATAGTTGCTATCATTAAAGACTATAATTTTATGTTTGCTGATTGTAAGACTATAAAATCGAAAAGTTGGAAATATTACTGTATCAATAAACTT 80 16400248 0.988673082 27 74 699 0.91 1.959041392 0.2 0.2 0.36 80 9 0 91 2L:16400198-16400378 6 CG5888 FBtr0340234|FBtr0080880 16400173|16400173 16400500|16400500 AAGACT 6mer3-8 dme-miR-14-3p 2L - 16400220 16400286 3'utr CG5888 FlyBase G8435.1 TTGCTATCATTAAAGACTATAATTTTATGTTTGCTGATTGTAAGACTATAAAATCGAAAAGTTGGAA 20 16400248 0.968553142 7 18 148 0.862068966 1.397940009 0.551724138 0.35 0.551724138 20 4 0 25 2L:16400220-16400286 6 22.5 206 FBgn0028523 337.3833333 21.57333333 32.72 0.06668972 1.042954265 0.687652812 3 3 3 0.15 dme-miR-304-5p 8mer-A1 TGAGATTA 2L 16400411 16400418 - 2L_16400411_16400418_- 0.625363234 0.62536331 0.625363272 7.07E-08 CG5888 FBtr0340234|FBtr0080880 16400173|16400173 16400500|16400500 2L - 16400395 16400440 3'utr CG5888 FlyBase G10974.1 TAGCTTATTTCTGAGACTATAATGAGATTAAAATAGGCTGAAGCTA 102 16400407 0.811007327 10 90 550 0.889830508 1.176091259 0.355932203 0.12745098 0.245762712 102 7 6 105 2L:16400395-16400440 8 CG5888 FBtr0340234|FBtr0080880 16400173|16400173 16400500|16400500 TGAGATTA 8mer-A1 dme-miR-304-5p 2L - 16400395 16400440 3'utr CG5888 FlyBase G8437.1 TAGCTTATTTCTGAGACTATAATGAGATTAAAATAGGCTGAAGCTA 71 16400407 0.764266672 8 66 350 0.921568627 1.194976603 0.450980392 0.352112676 0.549019608 71 3 5 94 2L:16400395-16400440 8 82.5 207 FBgn0028523 337.3833333 21.57333333 32.72 0.244528973 3.824165637 2.521393643 -11 -11 -11 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 16508867 16508872 - 2L_16508867_16508872_- 0.999992505 0.999999989 0.999996247 5.30E-06 CG5953 FBtr0337091 16508076 16510135 2L - 16508848 16508895 3'utr CG5953 FlyBase G10985.1 AAAAATATATAATATATATCATTGTACCTTATTTTGAAACAGAGATGT 37 16508873 0.93267216 6 35 410 0.957446809 1.352182518 0 0.216216216 0.382978723 37 1 1 45 2L:16508848-16508895 6 CG5953 FBtr0337091 16508076 16510135 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L - 16508845 16508893 3'utr CG5953 FlyBase G8448.1 AAATATATAATATATATCATTGTACCTTATTTTGAAACAGAGATGTTTT 18 16508873 0.696121129 3 18 203 1 1.380211242 0 0.277777778 0.458333333 18 0 0 24 2L:16508845-16508893 6 27 208 FBgn0032587 1367.886667 37.83 57.85 0.019738477 0.71371927 0.466724287 1 1 1 0.15 dme-miR-8-3p 8mer-A1 CAGTATTA 2L 16509284 16509291 - 2L_16509284_16509291_- 0.670921368 0.671243106 0.671082237 0.000227476 CG5953 FBtr0337091|FBtr0301144|FBtr0080874|FBtr0080873 16508076|16509118|16509118|16509118 16510135|16510135|16510135|16510135 2L - 16509203 16509310 3'utr CG5953 FlyBase G10987.1 CGTCTAACTAGCAGAATCTCAGTATTAACTATAAAATACACTTTACATAGGGATCCAAGCATTTGCCATAGATCGTTTCCTTTGGGGCCCGATCGTCCACTTCTGGGT 29 16509292 0.986117033 8 24 210 0.833333333 1.397940009 0.2 0.034482759 0.066666667 29 5 0 25 2L:16509203-16509310 8 CG5953 FBtr0080874|FBtr0080873|FBtr0337091|FBtr0301144 16509118|16509118|16508076|16509118 16510135|16510135|16510135|16510135 CAGTATTA 8mer-A1 dme-miR-8-3p 2L - 16509272 16509313 3'utr CG5953 FlyBase G8451.1 AGACGTCTAACTAGCAGAATCTCAGTATTAACTATAAAATAC 20 16509292 0.781826373 4 19 127 0.961538462 1.397940009 0.153846154 0.25 0.423076923 20 1 0 25 2L:16509272-16509313 8 18 209 FBgn0032587 1367.886667 37.83 57.85 0.013158985 0.475812847 0.311149525 1 1 1 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2L 16509468 16509474 - 2L_16509468_16509474_- 0.645695586 0.511727234 0.57871141 0.094729964 CG5953 FBtr0337091|FBtr0301144|FBtr0080874|FBtr0080873 16508076|16509118|16509118|16509118 16510135|16510135|16510135|16510135 2L - 16509440 16509503 3'utr CG5953 FlyBase G10988.2 AAACACAAAAACCACAATATAGAACACAAACCAAAGTTACTTTCTATTCTGTTCGAAGGGCTGC 51 16509467 0.972894093 4 48 267 0.983333333 1.770852012 0.033333333 0.156862745 0.283333333 51 1 0 59 2L:16509440-16509503 7 CG5953 FBtr0080874|FBtr0080873|FBtr0337091|FBtr0301144 16509118|16509118|16508076|16509118 16510135|16510135|16510135|16510135 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 16509446 16509496 3'utr CG5953 FlyBase G8452.3 AAAACCACAATATAGAACACAAACCAAAGTTACTTTCTATTCTGTTCGAAG 37 16509467 0.908297506 3 35 147 0.981818182 1.73239376 0.054545455 0.324324324 0.545454545 37 1 0 54 2L:16509446-16509496 7 40 210 FBgn0032587 1367.886667 37.83 57.85 0.029242189 1.057361882 0.691443388 -7 -7 -7 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 2L 16509900 16509906 - 2L_16509900_16509906_- 0.774525685 0.779716681 0.777121183 0.003670591 CG5953 FBtr0337091|FBtr0301144|FBtr0080874|FBtr0080873 16508076|16509118|16509118|16509118 16510135|16510135|16510135|16510135 2L - 16509865 16510035 3'utr CG5953 FlyBase G10990.1 GGAGCCTTCTCGCCCCGCAGCATGGCAAGTGAATTCCATTTGATGAAATAGTCGACAGAGAGTAGTAGGCAAATACAGAGAACACAGTACAACTTATTTTTAGTTTGGCCAGGATCGGGGTCACCACTTGTACAAAGCTTGGCTTGAACGGGGGCAGTGTTACTTAGCCGG 95 16509908 0.970790249 16 86 518 0.880733945 1.681241237 0.330275229 0.126315789 0.23853211 95 12 1 96 2L:16509865-16510035 7 CG5953 FBtr0080874|FBtr0080873|FBtr0337091|FBtr0301144 16509118|16509118|16508076|16509118 16510135|16510135|16510135|16510135 GTACAAA 7mer-A1 dme-miR-305-5p 2L - 16509860 16510034 3'utr CG5953 FlyBase G8456.1 GAGCCTTCTCGCCCCGCAGCATGGCAAGTGAATTCCATTTGATGAAATAGTCGACAGAGAGTAGTAGGCAAATACAGAGAACACAGTACAACTTATTTTTAGTTTGGCCAGGATCGGGGTCACCACTTGTACAAAGCTTGGCTTGAACGGGGGCAGTGTTACTTAGCCGGAAAGA 66 16509908 0.972483331 18 59 356 0.899082569 1.991226076 0.330275229 0.46969697 0.678899083 66 11 0 98 2L:16509860-16510034 7 45.5 211 FBgn0032587 1367.886667 37.83 57.85 0.03326299 1.202749141 0.786516854 2 2 2 0.15 dme-miR-2a-2-5p 7mer-A1 GATGAGA 2L 16662062 16662068 + 2L_16662062_16662068_+ 0.605587448 0.606056766 0.605822107 0.000331916 CG42389 FBtr0335497 16661777 16663218 2L + 16662039 16662083 3'utr CG42389 FlyBase G4872.1 GGAAAGTGGAATAGAGAAGGAGAGATGAGAAGGCAAAACCCCATT 18 16662064 0.713627686 3 16 11 0.818181818 1.255272505 0.045454545 0.166666667 0.318181818 18 4 0 18 2L:16662039-16662083 7 CG42389 FBtr0335497 16661777 16663218 GATGAGA 7mer-A1 dme-miR-2a-2-5p 2L + 16662023 16662083 3'utr CG42389 FlyBase G3795.1 AAAAAAAAAATGGAATGGAAAGTGGAATAGAGAAGGAGAGATGAGAAGGCAAAACCCCATT 17 16662064 0.936852329 4 17 26 1 1.505149978 0.3125 0.529411765 0.75 17 0 0 32 2L:16662023-16662083 7 15.5 212 FBgn0259735 3930.076667 62.35333333 96.36 0.003943943 0.248583342 0.160855127 -2 -2 -2 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 2L 16662861 16662867 + 2L_16662861_16662867_+ 0.620078534 0.614671771 0.617375153 0.003823114 CG42389 FBtr0335497 16661777 16663218 2L + 16662828 16662873 3'utr CG42389 FlyBase G4880.1 GGGGGCTGCTATATTCGCTGGCAATCCAACTGTTGCATTTCACAAC 10 16662860 0.689674502 5 9 59 0.923076923 1.079181246 0.307692308 0.3 0.461538462 10 1 0 12 2L:16662828-16662873 7 CG42389 FBtr0335497 16661777 16663218 TGCATTT 7mer-m8 dme-miR-277-3p 2L + 16662817 16662877 3'utr CG42389 FlyBase G3799.1 GCAACCCCAGTGGGGGCTGCTATATTCGCTGGCAATCCAACTGTTGCATTTCACAACCAAC 10 16662841 0.873268497 4 8 55 0.846153846 1.041392685 0.307692308 0.3 0.461538462 10 2 0 11 2L:16662817-16662877 7 5.5 213 FBgn0259735 3930.076667 62.35333333 96.36 0.001399464 0.088206992 0.057077626 1 20 10.5 0.15 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 16663038 16663043 + 2L_16663038_16663043_+ 0.758558178 0.781162689 0.769860434 0.015983795 CG42389 FBtr0335497 16661777 16663218 2L + 16663009 16663078 3'utr CG42389 FlyBase G4882.1 AATGTAATTGTTTCTTTCCATAGCATTTAATGTGAATTATACAAAACGGATTCTTATCTAAAAAACCAAG 32 16663021 0.860041263 9 30 305 0.947368421 1.255272505 0.289473684 0.125 0.263157895 32 1 1 36 2L:16663009-16663078 6 CG42389 FBtr0335497 16661777 16663218 ATGTGA 6mer3-8 dme-miR-1003-3p 2L + 16663014 16663075 3'utr CG42389 FlyBase G3801.1 AATTGTTTCTTTCCATAGCATTTAATGTGAATTATACAAAACGGATTCTTATCTAAAAAACC 15 16663020 0.874298366 8 15 127 1 1.342422681 0.045454545 0.4 0.590909091 15 0 0 22 2L:16663014-16663075 6 13.5 214 FBgn0259735 3930.076667 62.35333333 96.36 0.003435047 0.216508072 0.140099626 17 18 17.5 0.15 dme-miR-283-5p 6mer3-8 TGATAT 2L 16681598 16681603 + 2L_16681598_16681603_+ 0.915790549 0.965221922 0.940506236 0.034953278 squ FBtr0335140|FBtr0305565|FBtr0080887 16681443|16681443|16681443 16681653|16681653|16681653 2L + 16681583 16681620 3'utr squ FlyBase G4898.1 AGAAAGAAAAATACTTGATATCATAGGGTAAACAAAAT 107 16681597 0.697261625 5 105 636 0.975206612 1.594760753 0.024793388 0.112149533 0.214876033 107 1 2 118 2L:16681583-16681620 6 squ FBtr0080887|FBtr0335140|FBtr0305565 16681443|16681443|16681443 16681653|16681653|16681653 TGATAT 6mer3-8 dme-miR-283-5p 2L + 16681536 16681625 3'utr squ FlyBase G3815.1 AACGTCGTTTAGAAAACCGAATTTATATTGGATGCAGTTCTACAAATAGAAAGAAAAATACTTGATATCATAGGGTAAACAAAATATTTA 86 16681597 0.975047993 6 85 537 0.991071429 2.045322979 0.089285714 0.197674419 0.383928571 86 1 0 111 2L:16681536-16681625 6 93.5 215 FBgn0267347 773.79 92.38333333 140.8866667 0.120833818 1.012087317 0.663654001 1 1 1 0.15 dme-miR-305-3p 6mer3-8 ATGTGC 2L 16699762 16699767 + 2L_16699762_16699767_+ 0.999999999 0.99999531 0.999997655 3.32E-06 grp FBtr0080886|FBtr0100459|FBtr0080884|FBtr0339514|FBtr0080885 16699640|16699640|16699640|16699640|16699640 16699926|16699926|16699926|16699926|16699926 2L + 16699750 16699773 3'utr grp FlyBase G4915.1 CTAAAATTCTCAATGTGCTAACTT 5 16699757 0.769838117 2 4 37 0.8 0.602059991 0 0 0 5 1 0 4 2L:16699750-16699773 6 grp FBtr0080885|FBtr0080884|FBtr0339514|FBtr0080886|FBtr0100459 16699640|16699640|16699640|16699640|16699640 16699926|16699926|16699926|16699926|16699926 ATGTGC 6mer3-8 dme-miR-305-3p 2L + 16699751 16699786 3'utr grp FlyBase G3833.1 TAAAATTCTCAATGTGCTAACTTATTTTTAATTCAT 10 16699763 0.746083946 4 8 100 0.785714286 1.041392685 0 0.2 0.428571429 10 3 0 11 2L:16699751-16699786 6 7.5 216 FBgn0261278 1105.166667 59.92666667 91.90666667 0.006786307 0.125152965 0.081604526 5 -1 2 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 16705113 16705118 - 2L_16705113_16705118_- 0.947384934 0.944113131 0.945749032 0.002313512 CG31808 FBtr0303445 16704284 16705521 2L - 16705095 16705140 3'utr CG31808 FlyBase G11015.1 AACGGAATTTCTCGCGCCTTTCGTACCTTTTGTATTGTAATAAGTC 23 16705111 0.707252985 6 21 227 0.903225806 1.447158031 0.064516129 0.304347826 0.483870968 23 3 0 28 2L:16705095-16705140 6 CG31808 FBtr0303445 16704284 16705521 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L - 16705099 16705140 3'utr CG31808 FlyBase G8474.1 AACGGAATTTCTCGCGCCTTTCGTACCTTTTGTATTGTAATA 13 16705111 0.701802266 3 13 126 1 1.342422681 0.090909091 0.461538462 0.681818182 13 0 0 22 2L:16705099-16705140 6 17 217 FBgn0062978 13.66666667 0.833333333 1.236666667 1.243902439 20.4 13.74663073 -7 -7 -7 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC 2L 16723429 16723435 - 2L_16723429_16723435_- 0.66161562 0.661615524 0.661615572 7.07E-08 VhaSFD FBtr0080942|FBtr0335143|FBtr0080941|FBtr0080940 16723230|16722881|16723230|16723230 16723992|16723818|16723818|16723818 2L - 16723356 16723576 3'utr VhaSFD FlyBase G11016.1 AAGTATTGAGAGAAAAATTCGATTTTTTGTTGGCATTCCAAAAAGCAATTCACTGTAATGGCAGAACAAATACAAGCAACTATCCTCTACAAATTGTTCCATTCAATTCGATTGTTTATATATTTTGTTGTTATTATTATTTGTGTTCTTAATTTTATGAGTGCGCCGCTGTACAGAGTTTTTCTAAACCAGATGATATGCGCTTCTTACGTTTATATAGT 35 16723436 0.991898932 15 34 375 0.953488372 1.612783857 0.209302326 0.171428571 0.325581395 35 2 0 41 2L:16723356-16723576 7 VhaSFD FBtr0080941|FBtr0080940|FBtr0080942|FBtr0335143 16723230|16723230|16723230|16722881 16723818|16723818|16723992|16723818 TGTGTTC 7mer-m8 dme-miR-317-3p 2L - 16723415 16723455 3'utr VhaSFD FlyBase G8476.1 ATTTTGTTGTTATTATTATTTGTGTTCTTAATTTTATGAGT 15 16723436 0.803846157 2 11 209 0.740740741 1.301029996 0.222222222 0.428571429 0.703703704 14 7 0 20 2L:16723415-16723455 7 15 218 FBgn0027779 484.9333333 25.11333333 38.29666667 0.030932087 0.597292275 0.391678997 1 1 1 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 2L 16730963 16730968 + 2L_16730963_16730968_+ 0.961508253 0.938481558 0.949994905 0.016282336 CG31812 FBtr0290062 16730532 16731199 2L + 16730914 16730974 3'utr CG31812 FlyBase G4920.1 CCATGGGGATTGTGGGGATCCACGGCTGGCTGTTGTTCAAGGCTCATATTGTGTTAAAAAT 9 16730962 0.985866227 4 9 74 1 1 0 0.111111111 0.2 9 0 0 10 2L:16730914-16730974 6 CG31812 FBtr0290062 16730532 16731199 TGTGTT 6mer3-8 dme-miR-317-3p 2L + 16730900 16730975 3'utr CG31812 FlyBase G3837.1 AGGACTCACCCAGTCCATGGGGATTGTGGGGATCCACGGCTGGCTGTTGTTCAAGGCTCATATTGTGTTAAAAATA 8 16730962 0.985180342 3 8 61 1 1.204119983 0.25 0.5 0.75 8 0 0 16 2L:16730900-16730975 6 5.5 219 FBgn0051812 34.62 3.073333333 4.633333333 0.158867707 1.789587852 1.18705036 1 1 1 0.15 dme-miR-14-3p 6mer3-8 AAGACT 2L 16746943 16746948 + 2L_16746943_16746948_+ 0.999099736 0.995838772 0.997469254 0.002305805 CG17912 FBtr0343767 16746627 16748781 2L + 16746918 16746956 3'utr CG17912 FlyBase G4935.1 ATGGTTAACCGAAACGCACACTCATAAGACTAATCTGAA 13 16746942 0.941258907 4 12 50 0.928571429 1.113943352 0.214285714 0.076923077 0.142857143 13 1 0 13 2L:16746918-16746956 6 CG17912 FBtr0343767 16746627 16748781 AAGACT 6mer3-8 dme-miR-14-3p 2L + 16746929 16746955 3'utr CG17912 FlyBase G3849.1 AAACGCACACTCATAAGACTAATCTGA 15 16746941 0.744566897 3 12 60 0.85 0.929418926 0.35 0.333333333 0.5 15 2 1 17 2L:16746929-16746955 6 14 220 FBgn0032600 1948.576667 105.4366667 161.06 0.007184731 0.132781132 0.086924128 1 2 1.5 0.15 dme-miR-318-3p 6mer3-8 CCCAGT 2L 16821224 16821229 - 2L_16821224_16821229_- 0.919509167 0.998752871 0.959131019 0.056033758 Cas FBtr0080930 16821154 16821323 2L - 16821183 16821249 3'utr Cas FlyBase G11060.1 ACTCGATCACTCATTGCATGCCCAGTTTATTGTCATTTAAAAATTGTATCTAATATATGTAAGTTTT 16 16821205 0.788820971 8 16 142 1 1.301029996 0 0.1875 0.35 16 0 0 20 2L:16821183-16821249 6 Cas FBtr0080930 16821154 16821323 CCCAGT 6mer3-8 dme-miR-318-3p 2L - 16821185 16821227 3'utr Cas FlyBase G8512.1 CAGTTTATTGTCATTTAAAAATTGTATCTAATATATGTAAGTT 5 16821222 0.992682591 3 3 46 0.857142857 0.77815125 0.142857143 0.2 0.428571429 5 1 0 6 2L:16821185-16821227 4 4.5 221 FBgn0022213 1584.566667 59.12 90.5 0.002839893 0.076116373 0.049723757 -24 -7 -15.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2L 16835168 16835174 - 2L_16835168_16835174_- 0.823349562 0.823349274 0.823349418 2.12E-07 CG13283 FBtr0080928 16835134 16835259 2L - 16835142 16835202 3'utr CG13283 FlyBase G11085.1 AAAAAATAAAATGTATTGTTATATTTACCTAGTCATTGGAAATATACTTGTTATCAACATT 15 16835181 0.989186626 8 15 142 1 1.230448921 0.058823529 0.133333333 0.235294118 15 0 0 17 2L:16835142-16835202 7 CG13283 FBtr0080928 16835134 16835259 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 16835160 16835190 3'utr CG13283 FlyBase G8531.1 GTATTGTTATATTTACCTAGTCATTGGAAAT 9 16835179 0.623950934 5 9 86 1 1.041392685 0.545454545 0.111111111 0.272727273 9 0 0 11 2L:16835160-16835190 7 10.5 222 FBgn0032613 497 28.40666667 43.38333333 0.021126761 0.369631542 0.242028429 7 5 6 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 2L 16886094 16886100 + 2L_16886094_16886100_+ 0.521223819 0.52122381 0.521223814 0 CG31743 FBtr0080947|FBtr0340171 16886024|16886024 16886319|16886319 2L + 16885959 16886149 stop_codon CG31743 FlyBase G4977.1 ATATGAGGATGACTTTCGACTCTTTGACTACGCACTGGACGAGGTACTCGGCTTTGAGTTTGGCTAATTGTGAATGAAAAGCTGCTCTCTCAATATCCCCAAGTCACCACCATAACGCTTTCCACTGGAAAAGATTGTGATTTTAGGCTAGGACTTGTAGATTTAGGTGCACTCCCATGCGAATATTATTT 581 16886093 0.933615634 31 559 4781 0.963358779 1.896939372 0.116030534 0.111876076 0.21221374 581 17 7 631 2L:16885959-16886149 7 CG31743 FBtr0340171|FBtr0080947 16886024|16886024 16886319|16886319 TGTGATT 7mer-m1 dme-miR-308-3p 2L + 16885957 16886139 stop_codon CG31743 FlyBase G3873.1 ATATATGAGGATGACTTTCGACTCTTTGACTACGCACTGGACGAGGTACTCGGCTTTGAGTTTGGCTAATTGTGAATGAAAAGCTGCTCTCTCAATATCCCCAAGTCACCACCATAACGCTTTCCACTGGAAAAGATTGTGATTTTAGGCTAGGACTTGTAGATTTAGGTGCACTCCCATGCG 388 16886093 0.986406284 31 366 3119 0.933913043 1.775731776 0.114782609 0.360824742 0.568695652 388 30 8 537 2L:16885957-16886139 7 411 223 FBgn0032618 47.81666667 2.756666667 4.25 8.595329383 149.0931076 96.70588235 1 1 1 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 2L 16886197 16886202 + 2L_16886197_16886202_+ 0.643984858 0.58876031 0.616372584 0.039049689 CG31743 FBtr0080947|FBtr0340171 16886024|16886024 16886319|16886319 2L + 16886177 16886224 3'utr CG31743 FlyBase G4978.1 ACAAATGTTTCCAAGGGTTTTTGACTGTAAAACTTAGTTATAATCATT 104 16886197 0.708366811 9 94 983 0.898305085 1.72427587 0.008474576 0.125 0.228813559 104 11 1 106 2L:16886177-16886224 6 CG31743 FBtr0340171|FBtr0080947 16886024|16886024 16886319|16886319 TTGACT 6mer3-8 dme-miR-1012-3p 2L + 16886146 16886224 3'utr CG31743 FlyBase G3874.1 ATTTTTGTTCTGTATACATACCTTCCCGCGCACAAATGTTTCCAAGGGTTTTTGACTGTAAAACTTAGTTATAATCATT 89 16886197 0.671865876 12 75 777 0.854700855 1.15490196 0.034188034 0.280898876 0.452991453 89 11 6 100 2L:16886146-16886224 6 84 224 FBgn0032618 47.81666667 2.756666667 4.25 1.756709655 30.47158404 19.76470588 0 0 0 0.15 dme-miR-1008-3p 6mer2-7 GCTGTG 2L 16887381 16887386 - 2L_16887381_16887386_- 0.951250866 0.95516197 0.953206418 0.002765565 CG6115 FBtr0345447|FBtr0080959 16887107|16887123 16887461|16887461 2L - 16887358 16887417 3'utr CG6115 FlyBase G11093.1 CGGAAATCGCTGCAAAAACTCAAGGACTGATGCTGTGGATCGGGGGGAGCACGAAGAAGG 320 16887387 0.953226922 7 316 1427 0.983651226 2.256477206 0.049046322 0.125 0.237057221 320 5 1 361 2L:16887358-16887417 6 CG6115 FBtr0345447|FBtr0080959 16887107|16887123 16887461|16887461 GCTGTG 6mer2-7 dme-miR-1008-3p 2L - 16887301 16887444 3'utr CG6115 FlyBase G8535.1 CGGCGGGCGGGAGGCGTGGCAGCGATGCGGAAATCGCTGCAAAAACTCAAGGACTGATGCTGTGGATCGGGGGGAGCACGAAGAAGGAGGTGTAGAAAGAATCATGAGAATATGATACGTTTCGCCTTGCTTGTCGCACACAAA 212 16887387 0.971968762 11 208 891 0.978527607 2.503790683 0.079754601 0.386792453 0.601226994 212 7 0 319 2L:16887301-16887444 6 260.5 225 FBgn0040985 1485.056667 264.5733333 406.8133333 0.175414182 0.984604143 0.640342827 1 1 1 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 2L 16916602 16916607 + 2L_16916602_16916607_+ 0.963672285 0.915059358 0.939365822 0.034374511 tweek FBtr0304930|FBtr0304927|FBtr0304929|FBtr0340173|FBtr0304928|FBtr0340172 16916563|16916563|16916563|16916563|16916563|16916563 16917052|16917052|16917052|16917052|16917052|16917052 2L + 16916550 16916630 stop_codon tweek FlyBase G5006.1 CCCCCAACGAATTAGCCATGGCAGAGTAGCATCTATGACAGTTGACAATTACCCAAAGTCCTTCGATTTAGTCTAAGTAGC 21 16916617 0.930556028 11 18 129 0.807692308 1.322219295 0.307692308 0.142857143 0.307692308 21 5 0 21 2L:16916550-16916630 6 tweek FBtr0340172|FBtr0304928|FBtr0340173|FBtr0304929|FBtr0304927|FBtr0304930 16916563|16916563|16916563|16916563|16916563|16916563 16917052|16917052|16917052|16917052|16917052|16917052 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 2L + 16916591 16916633 3'utr tweek FlyBase G3895.1 TTGACAATTACCCAAAGTCCTTCGATTTAGTCTAAGTAGCGAT 11 16916617 0.6697694 7 11 84 1 1.230448921 0.117647059 0.272727273 0.529411765 11 0 0 17 2L:16916591-16916633 6 9 226 FBgn0261671 3032.533333 22.31666667 34.24333333 0.002967816 0.403286034 0.262824881 -15 -15 -15 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 16916732 16916738 + 2L_16916732_16916738_+ 0.655510838 0.655112344 0.655311591 0.000281782 tweek FBtr0304930|FBtr0304927|FBtr0304929|FBtr0340173|FBtr0304928|FBtr0340172 16916563|16916563|16916563|16916563|16916563|16916563 16917052|16917052|16917052|16917052|16917052|16917052 2L + 16916659 16916803 3'utr tweek FlyBase G5007.1 TTTTTATTATTTATTACCCTGGTTGACCTAGCATGCTTTAAGATTGAAACTGGCGGTATTATGTGGCCAGTATGGCAGCTTCATATATAATGTAAATGGTTTGCTCTCGTTCCCCTTCTTTTTAAGCGTATCTGTATACTCTTTC 349 16916731 0.863210858 24 343 2201 0.986516854 2.341434525 0.042696629 0.220630372 0.388764045 349 5 1 439 2L:16916659-16916803 7 tweek FBtr0340172|FBtr0304928|FBtr0340173|FBtr0304929|FBtr0304927|FBtr0304930 16916563|16916563|16916563|16916563|16916563|16916563 16917052|16917052|16917052|16917052|16917052|16917052 GGCAGCT 7mer-m8 dme-miR-980-3p 2L + 16916656 16916756 3'utr tweek FlyBase G3896.1 AAGTTTTTATTATTTATTACCCTGGTTGACCTAGCATGCTTTAAGATTGAAACTGGCGGTATTATGTGGCCAGTATGGCAGCTTCATATATAATGTAAATG 220 16916731 0.974763009 16 208 1257 0.979228487 2.51851394 0.059347181 0.406392694 0.614243323 219 7 0 330 2L:16916656-16916756 7 254 227 FBgn0261671 3032.533333 22.31666667 34.24333333 0.083758354 11.38162808 7.41750219 1 1 1 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2L 1696897 1696903 + 2L_1696897_1696903_+ 0.822842166 0.819765788 0.821303977 0.002175343 chinmo FBtr0303933|FBtr0077878|FBtr0303934|FBtr0307047|FBtr0077877|FBtr0303935 1696856|1696148|1696856|1696148|1696148|1696148 1698617|1697837|1698617|1704682|1698617|1698617 2L + 1696831 1697056 stop_codon chinmo FlyBase G1044.2 ACGCCCAAGGTCAATGTGGAGCAATAGGATGAGGAGAAACGAGGAGATGCCCCCAGAGGATGCCCCCCAAAGAAGCTGCTTAGATTTAGGCTAAGAATCGATGAAACGACGGAGTGAAAGATAGACGAGTGATTTACGCGCGCGCAAAGAAGATGAAACATGACTACTGATGCAACTGCTGTTGCCCTCGGAGACCACCTACGACCAAGCTGGACAAGAAGCCCCA 130 1696891 0.99997418 23 124 515 0.95862069 1.841984805 0.296551724 0.069230769 0.165517241 130 5 1 139 2L:1696831-1697056 7 chinmo FBtr0077877|FBtr0303935|FBtr0303934|FBtr0307047|FBtr0303933|FBtr0077878 1696148|1696148|1696856|1696148|1696856|1696148 1698617|1698617|1698617|1704682|1698617|1697837 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2L + 1696854 1697016 stop_codon chinmo FlyBase G824.1 ATAGGATGAGGAGAAACGAGGAGATGCCCCCAGAGGATGCCCCCCAAAGAAGCTGCTTAGATTTAGGCTAAGAATCGATGAAACGACGGAGTGAAAGATAGACGAGTGATTTACGCGCGCGCAAAGAAGATGAAACATGACTACTGATGCAACTGCTGTTGCC 86 1696891 0.981443073 19 84 368 0.984 2.089905111 0.264 0.290697674 0.512 86 2 0 123 2L:1696854-1697016 7 40 228 FBgn0086758 5795.003333 67.42333333 103.87 0.006902498 0.593266426 0.385096756 6 6 6 0.15 dme-miR-8-3p 6mer3-8 CAGTAT 2L 1697332 1697337 + 2L_1697332_1697337_+ 0.932782471 0.890334351 0.911558411 0.030015339 chinmo FBtr0303933|FBtr0077878|FBtr0303934|FBtr0307047|FBtr0077877|FBtr0303935 1696856|1696148|1696856|1696148|1696148|1696148 1698617|1697837|1698617|1704682|1698617|1698617 2L + 1697312 1697342 3'utr chinmo FlyBase G1046.1 CAAACCAAACCAATTAATGGCAGTATGAAAC 5 1697328 0.951202363 2 4 18 0.833333333 0.698970004 0 0.2 0.333333333 5 1 0 5 2L:1697312-1697342 6 chinmo FBtr0077877|FBtr0303935|FBtr0303934|FBtr0307047|FBtr0303933|FBtr0077878 1696148|1696148|1696856|1696148|1696856|1696148 1698617|1698617|1698617|1704682|1698617|1697837 CAGTAT 6mer3-8 dme-miR-8-3p 2L + 1697314 1697352 3'utr chinmo FlyBase G826.1 AACCAAACCAATTAATGGCAGTATGAAACAGGACACTCA 6 1697329 0.87736228 3 6 23 1 0.954242509 0 0.5 0.666666667 6 0 0 9 2L:1697314-1697352 6 5.5 229 FBgn0086758 5795.003333 67.42333333 103.87 0.000949094 0.081574134 0.052950804 4 3 3.5 0.15 dme-miR-92b-3p 6mer2-7 TGCAAT 2L 1698806 1698811 + 2L_1698806_1698811_+ 0.611606625 0.802665004 0.707135814 0.13509869 chinmo FBtr0307047 1696148 1704682 2L + 1698791 1698857 3'utr chinmo FlyBase G1051.1 ATCTAAGATCCAAAATGCAATGGAAAATATTGAGAAAATCTGCCAAGGCTAGCAAGTTCTTGGCCTG 11 1698806 0.963622621 7 10 54 0.923076923 1.079181246 0.384615385 0.181818182 0.307692308 11 1 0 12 2L:1698791-1698857 6 chinmo FBtr0307047 1696148 1704682 TGCAAT 6mer2-7 dme-miR-92b-3p 2L + 1698790 1698858 3'utr chinmo FlyBase G830.1 AATCTAAGATCCAAAATGCAATGGAAAATATTGAGAAAATCTGCCAAGGCTAGCAAGTTCTTGGCCTGT 8 1698808 0.935412167 6 8 32 1 1.255272505 0.277777778 0.625 0.833333333 8 0 0 18 2L:1698790-1698858 6 5.5 230 FBgn0086758 5795.003333 67.42333333 103.87 0.000949094 0.081574134 0.052950804 0 -2 -1 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2L 1698964 1698969 + 2L_1698964_1698969_+ 0.976351068 0.943535158 0.959943113 0.023204345 chinmo FBtr0307047 1696148 1704682 2L + 1698894 1699064 3'utr chinmo FlyBase G1052.1 ATCGATAGCATGTGTGTATGCGTGGCCTCAGTTGTATAATGATAGAACCTAGATATAATATGTATTCGTATACCTGTAAACCTATACCTAAAAACTACTAAGCGCATATGTAGGAACACACTAGGCTCGCCAACGGAGAGGAGAGGAGAGAAGAGTTGAGATGGGTTTTAT 176 1698962 0.932441431 19 170 1206 0.965346535 2.290034611 0.069306931 0.142045455 0.252475248 176 7 0 195 2L:1698894-1699064 6 chinmo FBtr0307047 1696148 1704682 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2L + 1698868 1698985 3'utr chinmo FlyBase G831.1 TATTATTACTATTAACGCATATATATATCGATAGCATGTGTGTATGCGTGGCCTCAGTTGTATAATGATAGAACCTAGATATAATATGTATTCGTATACCTGTAAACCTATACCTAAA 50 1698962 0.973409926 13 49 390 0.986666667 1.568201724 0.013333333 0.32 0.546666667 50 0 1 74 2L:1698868-1698985 6 68.5 231 FBgn0086758 5795.003333 67.42333333 103.87 0.011820528 1.015968755 0.659478194 2 2 2 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 1699298 1699305 + 2L_1699298_1699305_+ 0.650039225 0.649943266 0.649991246 6.78E-05 chinmo FBtr0307047|FBtr0307047|FBtr0307047 1696148|1696148|1696148 1704682|1704682|1704682 2L + 1699255 1699336 3'utr chinmo FlyBase G1054.1 ATGCAGATGCAGACTACCAGTGTCACCCGATCCCCAGTTTGTTCTGTGATATCGTTTTCAAGTTGCAAGAACGAGTGGCGTT 87 1699296 0.989004859 13 76 838 0.834951456 1.457377197 0.223300971 0.149425287 0.281553398 87 15 2 86 2L:1699255-1699336 8 chinmo FBtr0307047|FBtr0307047|FBtr0307047 1696148|1696148|1696148 1704682|1704682|1704682 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 1699242 1699322 3'utr chinmo FlyBase G832.1 CTAACCATAGAAGATGCAGATGCAGACTACCAGTGTCACCCGATCCCCAGTTTGTTCTGTGATATCGTTTTCAAGTTGCAA 42 1699296 0.991286337 12 35 397 0.85 1.707570176 0.183333333 0.333333333 0.533333333 42 9 0 51 2L:1699242-1699322 8 58.5 232 FBgn0086758 5795.003333 67.42333333 103.87 0.010094904 0.867652148 0.563204005 2 2 2 0.15 dme-miR-79-3p 7mer-A1 AGCTTTA 2L 1700007 1700013 + 2L_1700007_1700013_+ 0.823349557 0.823299126 0.823324342 3.57E-05 chinmo FBtr0307047 1696148 1704682 2L + 1699969 1700139 3'utr chinmo FlyBase G1057.2 ACCGAATGTTTCGCTGTAATCGAAGATGCTATCAAGAAAGCTTTAGTTCTTAGTTCGATTATCGGTTAGCTAGCTAGCTAGTGGCTAAGTGGCACCTAAGTTTAGTAGGAGGATTTAATTTTAAATGCAAAAGACACAATCACACACAATGAACACACAATAGCAATAATA 43 1700011 0.918129811 23 37 286 0.882352941 1.176091259 0.235294118 0.186046512 0.31372549 43 4 2 45 2L:1699969-1700139 7 chinmo FBtr0307047 1696148 1704682 AGCTTTA 7mer-A1 dme-miR-79-3p 2L + 1699974 1700066 3'utr chinmo FlyBase G836.1 ATGTTTCGCTGTAATCGAAGATGCTATCAAGAAAGCTTTAGTTCTTAGTTCGATTATCGGTTAGCTAGCTAGCTAGTGGCTAAGTGGCACCTA 29 1700011 0.851577693 9 23 183 0.818181818 1.079181246 0.272727273 0.379310345 0.590909091 29 6 2 36 2L:1699974-1700066 7 15 233 FBgn0086758 5795.003333 67.42333333 103.87 0.002588437 0.22247491 0.144411283 -4 -4 -4 0.15 dme-miR-14-3p 6mer2-7 AGACTG 2L 1700200 1700205 + 2L_1700200_1700205_+ 0.838447783 0.995990284 0.917219033 0.11139937 chinmo FBtr0307047 1696148 1704682 2L + 1700191 1700246 3'utr chinmo FlyBase G1058.1 TTTAGCCATAGACTGCGCAGTGACGAGATGAGCATGATACCACCACATAAACTTAT 25 1700199 0.904818819 4 25 116 1 1.431363764 0.444444444 0.08 0.148148148 25 0 0 27 2L:1700191-1700246 6 chinmo FBtr0307047 1696148 1704682 AGACTG 6mer2-7 dme-miR-14-3p 2L + 1700191 1700248 3'utr chinmo FlyBase G837.1 TTTAGCCATAGACTGCGCAGTGACGAGATGAGCATGATACCACCACATAAACTTATAC 18 1700199 0.897878472 5 14 67 0.857142857 1.079181246 0.285714286 0.388888889 0.607142857 18 3 1 24 2L:1700191-1700248 6 15.5 234 FBgn0086758 5795.003333 67.42333333 103.87 0.002674718 0.22989074 0.149224993 1 1 1 0.15 dme-miR-252-5p 7mer-m8 GTACTTA 2L 1701697 1701703 + 2L_1701697_1701703_+ 0.587856678 0.587861074 0.587858876 3.11E-06 chinmo FBtr0307047 1696148 1704682 2L + 1701675 1701712 3'utr chinmo FlyBase G1068.1 AAAGCCCCTCAACAAGCCAATTGTACTTACGATTACTT 32 1701696 0.771457759 2 32 191 1 1.602059991 0 0.21875 0.375 32 0 0 40 2L:1701675-1701712 7 chinmo FBtr0307047 1696148 1704682 GTACTTA 7mer-m8 dme-miR-252-5p 2L + 1701673 1701709 3'utr chinmo FlyBase G844.1 CGAAAGCCCCTCAACAAGCCAATTGTACTTACGATTA 19 1701696 0.783020989 2 18 111 1 1.477121255 0.033333333 0.526315789 0.7 19 0 0 30 2L:1701673-1701709 7 25.5 235 FBgn0086758 5795.003333 67.42333333 103.87 0.004400343 0.378207347 0.245499182 1 1 1 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 2L 1706762 1706767 + 2L_1706762_1706767_+ 0.738720868 1 0.869360434 0.184752223 cpb FBtr0077881|FBtr0331630 1706226|1706226 1706777|1706962 2L + 1706705 1706795 3'utr cpb FlyBase G1081.2 TTTGCACCGAAGTCGAGGCACTTGCGTTTCGTTCTTAATCCTTCCGCGAATAAATATTGTGTTTATTAATTGTAACTTTGTGTTTGTGTGT 29 1706761 0.984897192 13 27 253 0.9375 1.176091259 0.15625 0.103448276 0.1875 29 1 1 30 2L:1706705-1706795 6 cpb FBtr0077881|FBtr0331630 1706226|1706226 1706777|1706962 TGTGTT 6mer3-8 dme-miR-317-3p 2L + 1706700 1706783 3'utr cpb FlyBase G856.1 GCATATTTGCACCGAAGTCGAGGCACTTGCGTTTCGTTCTTAATCCTTCCGCGAATAAATATTGTGTTTATTAATTGTAACTTT 28 1706761 0.734445526 14 25 250 0.902439024 1.267171728 0.073170732 0.428571429 0.609756098 28 3 1 37 2L:1706700-1706783 6 10.5 236 FBgn0011570 1677.946667 128.21 196.5033333 0.006257648 0.081896888 0.053434208 1 1 1 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 2L 1706843 1706849 + 2L_1706843_1706849_+ 0.521223814 0.521223848 0.521223831 0 cpb FBtr0331630 1706226 1706962 2L + 1706817 1706869 3'utr cpb FlyBase G1082.1 AAGCAAAATATTAACTGAAATCGCTTTGTGATTGTATTATCTGAGGAAATGCA 20 1706848 0.931265133 7 20 168 1 1.414973348 0.038461538 0.2 0.384615385 20 0 0 26 2L:1706817-1706869 7 cpb FBtr0331630 1706226 1706962 TGTGATT 7mer-m1 dme-miR-308-3p 2L + 1706815 1706867 3'utr cpb FlyBase G857.1 CGAAGCAAAATATTAACTGAAATCGCTTTGTGATTGTATTATCTGAGGAAATG 22 1706848 0.970157702 7 22 179 1 1.544068044 0.057142857 0.454545455 0.657142857 22 0 0 35 2L:1706815-1706867 7 19.5 237 FBgn0011570 1677.946667 128.21 196.5033333 0.011621347 0.15209422 0.099234958 -5 -5 -5 0.15 dme-miR-7-5p 7mer-A1 TCTTCCA 2L 1707615 1707621 - 2L_1707615_1707621_- 0.513285464 0.816114688 0.664700076 0.214132581 CG17660 FBtr0077912 1707130 1707771 2L - 1707542 1707679 3'utr CG17660 FlyBase G6828.2 TAGTTCTATCCGCCATTGAGGAGGAAAACCCCTTATTGCTGCGCTGCGCTGACACTGATCTTCCAATTTCGAGAACCGTCTGTCCGGCCACGCCTTCTGAGCCCGTGTAAAATAATGTATGTAATCGTAGTTCCTTCT 180 1707631 0.801228029 29 162 1080 0.887892377 1.092545208 0.197309417 0.194444444 0.349775785 180 10 15 198 2L:1707542-1707679 7 CG17660 FBtr0077912 1707130 1707771 TCTTCCA 7mer-A1 dme-miR-7-5p 2L - 1707549 1707679 3'utr CG17660 FlyBase G5340.1 TAGTTCTATCCGCCATTGAGGAGGAAAACCCCTTATTGCTGCGCTGCGCTGACACTGATCTTCCAATTTCGAGAACCGTCTGTCCGGCCACGCCTTCTGAGCCCGTGTAAAATAATGTATGTAATCGTAGT 171 1707630 0.780137689 25 148 1006 0.88973384 1.290034611 0.16730038 0.409356725 0.615969582 171 18 11 234 2L:1707549-1707679 7 57 238 FBgn0031356 556.82 28.87 44.32666667 0.102367013 1.974367856 1.285907655 10 9 9.5 0.15 dme-miR-184-3p 6mer2-7 CCGTCC 2L 1711399 1711404 - 2L_1711399_1711404_- 0.989585852 0.951085179 0.970335516 0.027224106 frtz FBtr0333545|FBtr0077911 1711300|1711300 1711751|1711751 2L - 1711337 1711412 3'utr frtz FlyBase G6837.1 AACTATTGCCGTCCCAGTTAGTGCAAAGCTTTAAATAGGAAAGTTTTACTCATAGGTTCTCTATACTCTTTACACA 57 1711406 0.982518515 9 46 376 0.830985915 1.770852012 0.028169014 0.210526316 0.366197183 57 12 0 59 2L:1711337-1711412 6 frtz FBtr0333545|FBtr0077911 1711300|1711300 1711751|1711751 CCGTCC 6mer2-7 dme-miR-184-3p 2L - 1711378 1711412 3'utr frtz FlyBase G5348.2 AACTATTGCCGTCCCAGTTAGTGCAAAGCTTTAAA 38 1711406 0.683313038 6 31 206 0.833333333 0.954242509 0 0.342105263 0.537037037 38 5 4 45 2L:1711378-1711412 6 38.5 239 FBgn0086698 6514.663333 221.8366667 342.0966667 0.005909745 0.173551111 0.112541289 2 2 2 0.15 dme-miR-7-5p 8mer-A1 GTCTTCCA 2L 1711693 1711700 - 2L_1711693_1711700_- 0.675381453 0.675364935 0.675373194 1.17E-05 frtz FBtr0333545|FBtr0077911|FBtr0333544 1711300|1711300|1711598 1711751|1711751|1711751 2L - 1711678 1711714 3'utr frtz FlyBase G6838.1 CGGTTAAGCGCTGCGTCTTCCAATCGTTTGTAACTAT 19 1711697 0.630435661 6 16 133 0.80952381 0.929418926 0.380952381 0.105263158 0.19047619 19 3 1 17 2L:1711678-1711714 8 frtz FBtr0333545|FBtr0077911|FBtr0333544 1711300|1711300|1711598 1711751|1711751|1711751 GTCTTCCA 8mer-A1 dme-miR-7-5p 2L - 1711650 1711713 3'utr frtz FlyBase G5349.1 GGTTAAGCGCTGCGTCTTCCAATCGTTTGTAACTATTGTAGTAGGCTGCTCCTTCTACCCTCTT 18 1711697 0.971354525 5 18 111 1 1.322219295 0.238095238 0.111111111 0.238095238 18 0 0 21 2L:1711650-1711713 8 18 240 FBgn0086698 6514.663333 221.8366667 342.0966667 0.002762998 0.081140779 0.052616707 -3 -3 -3 0.15 dme-miR-92b-3p 8mer-m1 GTGCAATT 2L 1711735 1711742 - 2L_1711735_1711742_- 0.596698355 0.596698355 0.596698355 0 frtz FBtr0333545|FBtr0077911|FBtr0333544 1711300|1711300|1711598 1711751|1711751|1711751 2L - 1711717 1711763 stop_codon frtz FlyBase G6839.1 GGCGTGGTCTAATAATTCATAGTGCAATTCCCAGGCGTACACCACAC 25 1711744 0.684334359 4 21 148 0.892857143 1.397940009 0.285714286 0.12 0.214285714 25 3 0 25 2L:1711717-1711763 8 frtz FBtr0333545|FBtr0077911|FBtr0333544 1711300|1711300|1711598 1711751|1711751|1711751 GTGCAATT 8mer-m1 dme-miR-92b-3p 2L - 1711720 1711778 stop_codon frtz FlyBase G5350.1 AAGGTGGTCCACTTCGGCGTGGTCTAATAATTCATAGTGCAATTCCCAGGCGTACACCA 7 1711744 0.802747528 5 7 38 1 1.079181246 0 0.571428571 0.75 7 0 0 12 2L:1711720-1711778 8 14 241 FBgn0086698 6514.663333 221.8366667 342.0966667 0.002148998 0.063109495 0.040924105 2 2 2 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 1716306 1716311 - 2L_1716306_1716311_- 0.526473868 0.612394164 0.569434016 0.060754827 Rim2 FBtr0305618|FBtr0305618|FBtr0305618|FBtr0306167|FBtr0306167|FBtr0306167 1716242|1716242|1716242|1716242|1716242|1716242 1717102|1717102|1717102|1717102|1717102|1717102 2L - 1716247 1716354 3'utr Rim2 FlyBase G6844.1 AAAACGTATTTCACTGATAATGAGCAAAGAACTAAGGAAACCACTGTGAATAATTGATTGCAATCCGATTTGATGGTGAAATCAATAAATACAACAATTTTGTTTAAA 191 1716304 0.959861953 16 174 855 0.909465021 1.742332282 0.230452675 0.219895288 0.386831276 191 19 3 221 2L:1716247-1716354 6 Rim2 FBtr0305618|FBtr0305618|FBtr0305618|FBtr0306167|FBtr0306167|FBtr0306167 1716242|1716242|1716242|1716242|1716242|1716242 1717102|1717102|1717102|1717102|1717102|1717102 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 1716250 1716354 3'utr Rim2 FlyBase G5354.1 AAAACGTATTTCACTGATAATGAGCAAAGAACTAAGGAAACCACTGTGAATAATTGATTGCAATCCGATTTGATGGTGAAATCAATAAATACAACAATTTTGTTT 130 1716304 0.957515363 17 121 580 0.926829268 1.67669361 0.243902439 0.415384615 0.629268293 130 12 3 190 2L:1716250-1716354 6 138 242 FBgn0031359 376.9533333 20.33333333 30.89333333 0.366093062 6.786885246 4.466983168 -7 -7 -7 0.15 dme-miR-999-3p 6mer3-8 AGTTAA 2L 1716730 1716735 - 2L_1716730_1716735_- 0.998428966 0.999977516 0.999203241 0.001094955 Rim2 FBtr0305618|FBtr0306167 1716242|1716242 1717102|1717102 2L - 1716444 1716877 3'utr Rim2 FlyBase G6845.2 AAGAAAAAACCAATAATGGGAAACACGCACCAGGATCGAAGTGCACCATCCACACCCTAAACCCACTTGCTGCATGCCACAGAAGGATGTGGTATGCCACCGCAGGGCGAAACGTTATCAAAATTTGAAAAGGCTGCTATTTAGTTAAAGTTACAATATATATTGAGTGTATAAATGTGGTTGATACTTGGATAATATAGTGTACATAGGACTCGATTCGCTCAGAGTGCATTGTAAATAGTTAAAGAGTGAGTTCGCTGGCGTAGTTTTCTTAGTTGTAAGCACAAAATGTTGAATCGGCCGCAGTTGCCAGTAGATGCCGCTAAATATATATATATATAGATATAAAGCCGACCGATCCGATTCGTAAACTGTAAAAGTTTCCGTTAAGTTTCCTCAAATGCGATATACGATTTAGTTATCATTACTCTACT 656 1716739 0.997252881 77 585 5290 0.888020833 1.833784375 0.203125 0.149390244 0.2734375 656 77 9 682 2L:1716444-1716877 6 Rim2 FBtr0305618|FBtr0306167 1716242|1716242 1717102|1717102 AGTTAA 6mer3-8 dme-miR-999-3p 2L - 1716503 1716860 3'utr Rim2 FlyBase G5355.2 GGGAAACACGCACCAGGATCGAAGTGCACCATCCACACCCTAAACCCACTTGCTGCATGCCACAGAAGGATGTGGTATGCCACCGCAGGGCGAAACGTTATCAAAATTTGAAAAGGCTGCTATTTAGTTAAAGTTACAATATATATTGAGTGTATAAATGTGGTTGATACTTGGATAATATAGTGTACATAGGACTCGATTCGCTCAGAGTGCATTGTAAATAGTTAAAGAGTGAGTTCGCTGGCGTAGTTTTCTTAGTTGTAAGCACAAAATGTTGAATCGGCCGCAGTTGCCAGTAGATGCCGCTAAATATATATATATATAGATATAAAGCCGACCGATCCGATTCGTAAACTGT 284 1716739 0.989492683 50 255 2137 0.904761905 1.734685557 0.169047619 0.348591549 0.55952381 284 34 6 380 2L:1716503-1716860 6 121.5 243 FBgn0031359 376.9533333 20.33333333 30.89333333 0.322321065 5.975409836 3.932887354 4 4 4 0.15 dme-miR-190-5p 6mer3-8 ACATAT 2L 17367730 17367735 - 2L_17367730_17367735_- 0.995882185 0.997962675 0.99692243 0.001471136 Lrch FBtr0080968|FBtr0080969 17367509|17367509 17368196|17368196 2L - 17367698 17367814 3'utr Lrch FlyBase G11109.1 CACCCATACGAGCGAAATATCGGGCCAAAATTACGACTAGCGATTAGTTGCATATTGAATACTGTTTTAAGTATGAATCACATATGAACATCCAAATATTTAGATATTTATCGAATT 15 17367731 0.970578688 11 14 85 0.9375 0.875061263 0.125 0.066666667 0.125 15 0 1 15 2L:17367698-17367814 6 Lrch FBtr0080968|FBtr0080969 17367509|17367509 17368196|17368196 ACATAT 6mer3-8 dme-miR-190-5p 2L - 17367707 17367746 3'utr Lrch FlyBase G8545.1 AAGTATGAATCACATATGAACATCCAAATATTTAGATATT 7 17367730 0.741111066 3 6 37 1 0.954242509 0.222222222 0.142857143 0.333333333 7 0 0 9 2L:17367707-17367746 6 6.5 244 FBgn0032633 3134.436667 93.34666667 144.12 0.002073738 0.06963291 0.045101304 -4 -5 -4.5 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 17368997 17369003 - 2L_17368997_17369003_- 0.621499832 0.620922162 0.621210997 0.000408425 Lrch FBtr0339797 17368740 17370818 2L - 17368970 17369027 3'utr Lrch FlyBase G11113.1 ATTGAAGGGAAGACAAAGCATTGAGGCAGCTGTAATCAGTCATACATTTTTTATGAAA 156 17369007 0.90037982 5 156 522 1 2.240549248 0.327586207 0.096153846 0.189655172 156 0 0 174 2L:17368970-17369027 7 Lrch FBtr0339797 17368740 17370818 GGCAGCT 7mer-m8 dme-miR-980-3p 2L - 17368983 17369026 3'utr Lrch FlyBase G8549.1 TTGAAGGGAAGACAAAGCATTGAGGCAGCTGTAATCAGTCATAC 102 17369007 0.782052038 4 102 318 1 2.184691431 0.37254902 0.37254902 0.581699346 102 0 0 153 2L:17368983-17369026 7 128.5 245 FBgn0032633 3134.436667 93.34666667 144.12 0.040996202 1.376589059 0.891618096 4 4 4 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 17369156 17369163 - 2L_17369156_17369163_- 0.500095366 0.500118997 0.500107182 1.67E-05 Lrch FBtr0339797 17368740 17370818 2L - 17369149 17369183 3'utr Lrch FlyBase G11114.1 ATTAATTTAGGCATACTATTGTACTTAAACGATGA 14 17369164 0.732390734 2 14 116 1 1.146128036 0 0 0 14 0 0 14 2L:17369149-17369183 8 Lrch FBtr0339797 17368740 17370818 GTACTTAA 8mer-A1 dme-miR-252-5p 2L - 17369146 17369181 3'utr Lrch FlyBase G8550.1 TAATTTAGGCATACTATTGTACTTAAACGATGAAAA 11 17369164 0.674633709 4 10 92 0.944444444 1.230448921 0.333333333 0.454545455 0.666666667 11 1 0 17 2L:17369146-17369181 8 12.5 246 FBgn0032633 3134.436667 93.34666667 144.12 0.003987957 0.133909442 0.086733278 1 1 1 0.15 dme-miR-1012-3p 7mer-A1 TGACTAA 2L 17370316 17370322 - 2L_17370316_17370322_- 0.761129005 0.544230551 0.652679778 0.153370329 Lrch FBtr0339797 17368740 17370818 2L - 17370262 17370339 3'utr Lrch FlyBase G11119.1 TATGACTATGATGACTATGACTAATAATGACTGTTTTAATTTAATAGATTTTATAATAATCTCCGGACTAAACATTAA 27 17370306 0.865440668 10 27 230 1 1.602059991 0.1 0.333333333 0.55 27 0 0 40 2L:17370262-17370339 7 Lrch FBtr0339797 17368740 17370818 TGACTAA 7mer-A1 dme-miR-1012-3p 2L - 17370290 17370338 3'utr Lrch FlyBase G8557.1 ATGACTATGATGACTATGACTAATAATGACTGTTTTAATTTAATAGATT 20 17370314 0.713741484 7 18 179 0.933333333 1.447158031 0.1 0.35 0.566666667 20 2 0 28 2L:17370290-17370338 7 21 247 FBgn0032633 3134.436667 93.34666667 144.12 0.006699768 0.224967862 0.145711907 -16 -8 -12 0.15 dme-miR-277-3p 7mer-A1 GCATTTA 2L 17370582 17370588 - 2L_17370582_17370588_- 0.820727397 0.820839794 0.820783595 7.95E-05 Lrch FBtr0339797 17368740 17370818 2L - 17370561 17370621 3'utr Lrch FlyBase G11122.1 AAATTCCCCAAAAGACAAGCAGAACACATTGAGGCATTTAATGAGAGGAAACGCAAAGACT 108 17370592 0.760599074 6 99 433 0.949152542 2.049218023 0.025423729 0.074074074 0.152542373 108 6 0 112 2L:17370561-17370621 7 Lrch FBtr0339797 17368740 17370818 GCATTTA 7mer-A1 dme-miR-277-3p 2L - 17370523 17370619 3'utr Lrch FlyBase G8559.1 ATTCCCCAAAAGACAAGCAGAACACATTGAGGCATTTAATGAGAGGAAACGCAAAGACTTCAAATCAATATTTGGCTCCTATTTCTGTATGATTATT 90 17370592 0.951887446 7 86 387 0.969230769 1.62324929 0.084615385 0.377777778 0.569230769 90 2 2 126 2L:17370523-17370619 7 92.5 248 FBgn0032633 3134.436667 93.34666667 144.12 0.029510885 0.990929867 0.641826256 4 4 4 0.15 dme-miR-282-5p 6mer2-7 GAGGCT 2L 17370697 17370702 - 2L_17370697_17370702_- 0.985286392 0.990690635 0.987988513 0.003821346 Lrch FBtr0339797 17368740 17370818 2L - 17370662 17370755 3'utr Lrch FlyBase G11123.2 CAATAGAGTTAAGAGAGCTGCTTTTGCGCTTTTCCACTGGGTAGTGAGTTCTTGAGGCTGCTTTTGTTTACTGCTTAGGATTACGTCCCATATT 232 17370703 0.807255448 19 224 2219 0.971119134 1.65160103 0.472924188 0.159482759 0.296028881 232 3 5 269 2L:17370662-17370755 6 Lrch FBtr0339797 17368740 17370818 GAGGCT 6mer2-7 dme-miR-282-5p 2L - 17370664 17370753 3'utr Lrch FlyBase G8560.1 ATAGAGTTAAGAGAGCTGCTTTTGCGCTTTTCCACTGGGTAGTGAGTTCTTGAGGCTGCTTTTGTTTACTGCTTAGGATTACGTCCCATA 142 17370704 0.988497431 13 141 1330 0.995192308 2.315970345 0.408653846 0.373239437 0.572115385 142 1 0 207 2L:17370664-17370753 6 174.5 249 FBgn0032633 3134.436667 93.34666667 144.12 0.055671886 1.869375803 1.210796558 1 2 1.5 0.15 dme-miR-932-5p 7mer-A1 GAATTGA 2L 17413287 17413293 - 2L_17413287_17413293_- 0.823345651 0.823349561 0.823347606 2.76E-06 Dif FBtr0081009|FBtr0081008|FBtr0301578 17413246|17413246|17413246 17413514|17413514|17413514 2L - 17413266 17413379 3'utr Dif FlyBase G11138.1 TTACCGCAATGTACATAAATTTAATGAGGGAAATGCGAATCTCATTGCCCGATGCCTTGTTACGACTTTTCGTTATTGACAAAAGTGAATTGAAAATGATTATTGTTTAAATAA 26 17413290 0.979002354 14 25 172 0.966666667 1.462397998 0.4 0.153846154 0.266666667 26 1 0 29 2L:17413266-17413379 7 Dif FBtr0081008|FBtr0301578|FBtr0081009 17413246|17413246|17413246 17413514|17413514|17413514 GAATTGA 7mer-A1 dme-miR-932-5p 2L - 17413275 17413382 3'utr Dif FlyBase G8572.1 ATTTTACCGCAATGTACATAAATTTAATGAGGGAAATGCGAATCTCATTGCCCGATGCCTTGTTACGACTTTTCGTTATTGACAAAAGTGAATTGAAAATGATTATTG 23 17413319 0.976773326 13 21 142 0.96875 1.190331698 0.21875 0.304347826 0.5 23 0 1 31 2L:17413275-17413382 7 5.5 250 FBgn0011274 1172.133333 42.98333333 65.76666667 0.004692299 0.127956572 0.083628991 -3 26 11.5 0.15 dme-miR-277-3p 6mer2-7 GCATTT 2L 17413344 17413349 + 2L_17413344_17413349_+ 0.779403411 0.516421064 0.647912237 0.185956568 CG15141 FBtr0080979 17413170 17413499 2L + 17413245 17413396 3'utr CG15141 FlyBase G5019.2 TGTAAATTCTAAAGTTATATTTTATTTAAACAATAATCATTTTCAATTCACTTTTGTCAATAACGAAAAGTCGTAACAAGGCATCGGGCAATGAGATTCGCATTTCCCTCATTAAATTTATGTACATTGCGGTAAAATAGAATTATATAAGA 33 17413328 0.982462453 15 28 199 0.880952381 1.091080469 0.095238095 0.212121212 0.380952381 33 3 2 37 2L:17413245-17413396 6 CG15141 FBtr0080979 17413170 17413499 GCATTT 6mer2-7 dme-miR-277-3p 2L + 17413294 17413361 3'utr CG15141 FlyBase G3903.1 ACTTTTGTCAATAACGAAAAGTCGTAACAAGGCATCGGGCAATGAGATTCGCATTTCCCTCATTAAAT 15 17413328 0.940488661 7 15 61 1 1.301029996 0.2 0.333333333 0.5 15 0 0 20 2L:17413294-17413361 6 6.5 251 FBgn0032635 404.2066667 29.24 44.61666667 0.016080883 0.222298222 0.145685469 16 16 16 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2L 17415522 17415528 - 2L_17415522_17415528_- 0.661535806 0.661485243 0.661510525 3.58E-05 Dif FBtr0301577 17414905 17415684 2L - 17415441 17415566 5'utr Dif FlyBase G11145.1 ACAGCAAAACACACAACTGCACCAACAAATTAAACTTTTCTAGTCGTCTTTTTGTTTCAGTATTAATTATAATGATTACACAAATTTCTAGCTAAGAACCCCTGAGATCGATCGCTCACCAAATTC 218 17415529 0.992561497 18 210 2415 0.955172414 2.141449773 0.044827586 0.252293578 0.437931034 218 12 1 277 2L:17415441-17415566 7 Dif FBtr0301577 17414905 17415684 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2L - 17415486 17415544 5'utr Dif FlyBase G8580.1 CAACAAATTAAACTTTTCTAGTCGTCTTTTTGTTTCAGTATTAATTATAATGATTACAC 167 17415529 0.730211041 15 160 1896 0.954166667 2.359835482 0.016666667 0.317365269 0.525 167 11 0 229 2L:17415486-17415544 7 178.5 252 FBgn0011274 1172.133333 42.98333333 65.76666667 0.152286429 4.152772392 2.714140902 1 1 1 0.15 dme-miR-304-5p 6mer2-7 GAGATT 2L 17438779 17438784 - 2L_17438779_17438784_- 0.808656435 0.910520965 0.8595887 0.072029149 dl FBtr0081007|FBtr0340250 17438644|17438644 17439788|17439788 2L - 17438734 17438816 3'utr dl FlyBase G11164.1 ATGATTAGTCGAAATTATAGTCAAGAAAATGAGAGATTGATTCGAAATCAATATGAAATTTTTGTCGCTTTTCTACTCGTTTA 18 17438780 0.969136251 9 18 106 1 1.322219295 0.142857143 0.111111111 0.238095238 18 0 0 21 2L:17438734-17438816 6 dl FBtr0340250|FBtr0081007 17438644|17438644 17439788|17439788 GAGATT 6mer2-7 dme-miR-304-5p 2L - 17438768 17438815 3'utr dl FlyBase G8592.1 TGATTAGTCGAAATTATAGTCAAGAAAATGAGAGATTGATTCGAAATC 16 17438780 0.78324676 6 16 77 1 1.447158031 0.178571429 0.4375 0.678571429 16 0 0 28 2L:17438768-17438815 6 10 253 FBgn0260632 1797.99 61.25333333 93.53666667 0.005561766 0.163256421 0.106909946 -4 -4 -4 0.15 dme-miR-33-5p 8mer-m1 CAATGCAC 2L 17438894 17438901 - 2L_17438894_17438901_- 0.662427901 0.660554132 0.661491016 0.001324977 dl FBtr0081007|FBtr0340250 17438644|17438644 17439788|17439788 2L - 17438877 17439067 3'utr dl FlyBase G11165.1 TGTTTTGAGATGGATGCTAGACATCTAACTGAATCCTACCTAGTCAAATAGCATCATATATATTTGATGTTTTCTTCGGTATACCAAAGACTACTTAACAAATCATCGCCCCCGATGACGTATTACTCGAATAGACTCTTTTAGAAACTATTAGAAAGCACTCAATCAATGCACAAATCCACTCACCCAGA 281 17438902 0.916373081 31 263 1689 0.949704142 1.904445041 0.159763314 0.170818505 0.310650888 281 14 3 321 2L:17438877-17439067 8 dl FBtr0340250|FBtr0081007 17438644|17438644 17439788|17439788 CAATGCAC 8mer-m1 dme-miR-33-5p 2L - 17438865 17439006 3'utr dl FlyBase G8593.1 ATTTGATGTTTTCTTCGGTATACCAAAGACTACTTAACAAATCATCGCCCCCGATGACGTATTACTCGAATAGACTCTTTTAGAAACTATTAGAAAGCACTCAATCAATGCACAAATCCACTCACCCAGAACACCATGAAAT 157 17438928 0.976044885 19 147 938 0.951020408 2.367355921 0.093877551 0.324840764 0.567346939 157 12 0 233 2L:17438865-17439006 8 51 254 FBgn0260632 1797.99 61.25333333 93.53666667 0.028365008 0.832607749 0.545240726 1 27 14 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 17439328 17439333 - 2L_17439328_17439333_- 0.989996589 0.989257146 0.989626867 0.000522905 dl FBtr0081007|FBtr0340250 17438644|17438644 17439788|17439788 2L - 17439248 17439360 3'utr dl FlyBase G11167.1 AAATTGAAACCGAAAACCCGATCATATGTACCTACAACACGGTGTGTATATTTTGTCTTATAGATCCAGCGCACTTGAGGCGGAAACGTCAGAAGACTGGCGGTGATCCCATG 84 17439334 0.953880843 10 80 370 0.95959596 1.977723605 0.303030303 0.154761905 0.282828283 84 4 0 95 2L:17439248-17439360 6 dl FBtr0340250|FBtr0081007 17438644|17438644 17439788|17439788 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L - 17439313 17439358 3'utr dl FlyBase G8595.1 ATTGAAACCGAAAACCCGATCATATGTACCTACAACACGGTGTGTA 50 17439334 0.958975607 3 47 230 0.962025316 1.880813592 0.240506329 0.44 0.64556962 50 3 0 76 2L:17439313-17439358 6 60 255 FBgn0260632 1797.99 61.25333333 93.53666667 0.033370597 0.979538529 0.641459677 1 1 1 0.15 dme-miR-2b-2-5p 6mer2-7 TGAAGA 2L 17461005 17461010 - 2L_17461005_17461010_- 0.550459601 0.990213722 0.770336661 0.310953106 BicD FBtr0081002|FBtr0330225|FBtr0330226 17460815|17459603|17460815 17461725|17461725|17461665 2L - 17460955 17461020 3'utr BicD FlyBase G11187.1 AGATAGATGATGAAGATTTTTGTATTTATTGAGCGGCATTTGGTCGCCATGAAATGAAGAAATTGT 7 17460995 0.989117899 5 7 50 1 0.954242509 0.222222222 0.142857143 0.333333333 7 0 0 9 2L:17460955-17461020 6 BicD FBtr0081002|FBtr0330225|FBtr0330226 17460815|17459603|17460815 17461725|17461725|17461665 TGAAGA 6mer2-7 dme-miR-2b-2-5p 2L - 17460984 17461020 3'utr BicD FlyBase G8607.1 AGATAGATGATGAAGATTTTTGTATTTATTGAGCGGC 5 17461002 0.86121903 4 5 49 1 0.84509804 0.142857143 0.2 0.428571429 5 0 0 7 2L:17460984-17461020 6 4.5 256 FBgn0000183 544.58 15.32 23.58666667 0.008263249 0.293733681 0.190785755 -15 -8 -11.5 0.15 dme-miR-283-5p 7mer-m8 TGATATT 2L 17461215 17461221 - 2L_17461215_17461221_- 0.620150278 0.620203676 0.620176977 3.78E-05 BicD FBtr0081002|FBtr0330225|FBtr0330226 17460815|17459603|17460815 17461725|17461725|17461665 2L - 17461198 17461240 3'utr BicD FlyBase G11189.1 GATGTTGAACAGATGGTATTGATATTGGCAACTGAAACATGCA 9 17461215 0.836989282 4 9 57 1 1.041392685 0.272727273 0.222222222 0.363636364 9 0 0 11 2L:17461198-17461240 7 BicD FBtr0081002|FBtr0330225|FBtr0330226 17460815|17459603|17460815 17461725|17461725|17461665 TGATATT 7mer-m8 dme-miR-283-5p 2L - 17461203 17461248 3'utr BicD FlyBase G8608.1 CACAAATTGATGTTGAACAGATGGTATTGATATTGGCAACTGAAAC 7 17461226 0.782233352 5 7 49 1 1.176091259 0 0.714285714 0.866666667 7 0 0 15 2L:17461203-17461248 7 6.5 257 FBgn0000183 544.58 15.32 23.58666667 0.011935804 0.424281984 0.275579423 -6 5 -0.5 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 2L 17461499 17461504 - 2L_17461499_17461504_- 0.997414612 0.998127418 0.997771015 0.000504026 BicD FBtr0081002|FBtr0330225|FBtr0305688|FBtr0330226 17460815|17459603|17461396|17460815 17461725|17461725|17462145|17461665 2L - 17461430 17461674 stop_codon BicD FlyBase G11191.1 AAGTTGTAAAGTCGTTGGAGTTCCTGCGGAAATGAGAGATTCCCAAAACCACATGATATACTGCGAACGTATTTGAGAACGAAGCTATATCCCAGCTGTATCCAACTACTATAACTATGTTTGTTTGTATTGTACTTGTATTTATTGAAAGTTTAGTTAGATGAAAGTTTTGTGTTAGGCAAGGGAGCAACAAACGGTTATTAACGGTTAGTTACTTAAACGTCCATTTAATTTAATTAAAAACA 159 17461505 0.943649442 31 154 1175 0.972677596 1.949390007 0.169398907 0.144654088 0.256830601 159 4 1 178 2L:17461430-17461674 6 BicD FBtr0081002|FBtr0330225|FBtr0305688|FBtr0330226 17460815|17459603|17461396|17460815 17461725|17461725|17462145|17461665 TGTGTT 6mer3-8 dme-miR-317-3p 2L - 17461431 17461525 3'utr BicD FlyBase G8609.1 AGTTTAGTTAGATGAAAGTTTTGTGTTAGGCAAGGGAGCAACAAACGGTTATTAACGGTTAGTTACTTAAACGTCCATTTAATTTAATTAAAAAC 72 17461505 0.756518576 14 68 614 0.944954128 2.012837225 0.247706422 0.416666667 0.614678899 72 6 0 103 2L:17461431-17461525 6 44.5 258 FBgn0000183 544.58 15.32 23.58666667 0.081714349 2.904699739 1.886659129 1 1 1 0.15 dme-miR-283-5p 6mer3-8 TGATAT 2L 17461616 17461621 - 2L_17461616_17461621_- 0.986842514 0.991173001 0.989007757 0.003062126 BicD FBtr0081002|FBtr0330225|FBtr0305688|FBtr0330226 17460815|17459603|17461396|17460815 17461725|17461725|17462145|17461665 2L - 17461430 17461674 stop_codon BicD FlyBase G11191.1 AAGTTGTAAAGTCGTTGGAGTTCCTGCGGAAATGAGAGATTCCCAAAACCACATGATATACTGCGAACGTATTTGAGAACGAAGCTATATCCCAGCTGTATCCAACTACTATAACTATGTTTGTTTGTATTGTACTTGTATTTATTGAAAGTTTAGTTAGATGAAAGTTTTGTGTTAGGCAAGGGAGCAACAAACGGTTATTAACGGTTAGTTACTTAAACGTCCATTTAATTTAATTAAAAACA 159 17461621 0.943649442 31 154 1175 0.972677596 1.949390007 0.169398907 0.144654088 0.256830601 159 4 1 178 2L:17461430-17461674 6 BicD FBtr0081002|FBtr0330225|FBtr0305688|FBtr0330226 17460815|17459603|17461396|17460815 17461725|17461725|17462145|17461665 TGATAT 6mer3-8 dme-miR-283-5p 2L - 17461593 17461651 3'utr BicD FlyBase G8610.1 CTGCGGAAATGAGAGATTCCCAAAACCACATGATATACTGCGAACGTATTTGAGAACGA 25 17461621 0.888477998 7 25 101 1 1.602059991 0.175 0.44 0.65 25 0 0 40 2L:17461593-17461651 6 35 259 FBgn0000183 544.58 15.32 23.58666667 0.064269712 2.2845953 1.483889203 0 0 0 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 2L 17475521 17475526 - 2L_17475521_17475526_- 0.999999999 0.999999438 0.999999719 4.24E-07 Aac11 FBtr0081001 17474910 17475587 2L - 17475510 17475548 3'utr Aac11 FlyBase G11207.1 ACTTCACTTGAATGGTTTGTCCCTAGTCCGTAGACATAC 7 17475518 0.975400187 5 7 52 1 0.954242509 0.444444444 0.142857143 0.333333333 7 0 0 9 2L:17475510-17475548 6 Aac11 FBtr0081001 17474910 17475587 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 2L - 17475511 17475540 3'utr Aac11 FlyBase G8624.1 TGAATGGTTTGTCCCTAGTCCGTAGACATA 11 17475532 0.55876014 6 10 80 0.956521739 1.342422681 0.173913043 0.636363636 0.826086957 11 1 0 22 2L:17475511-17475540 6 9 260 FBgn0027885 2398.67 116.9633333 177.4933333 0.003752079 0.076947191 0.05070613 -8 6 -1 0.15 dme-bantam-3p 8mer-A1 TGATCTCA 2L 17481931 17481938 + 2L_17481931_17481938_+ 0.628508194 0.62887253 0.628690362 0.000257599 CG5110 FBtr0306162 17481785 17482037 2L + 17481886 17481965 3'utr CG5110 FlyBase G5034.1 CACCATTGTACTATTCCGGGAATTTATTTCATATCCTGCGAAGGGTGATCTCAAAGATGAACAAAGTTCCGAGTCCTCCG 38 17481931 0.978760997 7 34 229 0.931818182 1.311753861 0.454545455 0.157894737 0.272727273 38 2 1 41 2L:17481886-17481965 8 CG5110 FBtr0306162 17481785 17482037 TGATCTCA 8mer-A1 dme-bantam-3p 2L + 17481890 17481944 3'utr CG5110 FlyBase G3918.1 ATTGTACTATTCCGGGAATTTATTTCATATCCTGCGAAGGGTGATCTCAAAGATG 19 17481931 0.971694183 6 18 109 0.962962963 1.414973348 0.518518519 0.368421053 0.555555556 19 1 0 26 2L:17481890-17481944 8 25.5 261 FBgn0032642 238.3333333 55.84666667 85.14666667 0.106993007 0.456607377 0.299483245 0 0 0 0.15 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 2L 17973602 17973608 + 2L_17973602_17973608_+ 0.619980456 0.620198562 0.620089509 0.00015422 CG5674 FBtr0290267|FBtr0081021|FBtr0340182|FBtr0081022 17973392|17973392|17973392|17972122 17974868|17974868|17974868|17974868 2L + 17973591 17973619 3'utr CG5674 FlyBase G5044.1 AGAGAGCTATGTGGTGCTGAAAATGCAAT 6 17973602 0.682697517 2 6 28 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2L:17973591-17973619 7 CG5674 FBtr0340182|FBtr0081022|FBtr0290267|FBtr0081021 17973392|17972122|17973392|17973392 17974868|17974868|17974868|17974868 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 2L + 17973587 17973616 3'utr CG5674 FlyBase G3923.1 AAGCAGAGAGCTATGTGGTGCTGAAAATGC 5 17973602 0.938693162 3 4 24 1 0.84509804 0.285714286 0.2 0.428571429 5 0 0 7 2L:17973587-17973616 7 5.5 262 FBgn0032656 133.77 5.08 7.833333333 0.041115347 1.082677165 0.70212766 0 0 0 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 17974325 17974331 + 2L_17974325_17974331_+ 0.694050474 0.672431322 0.683240898 0.015287083 CG5674 FBtr0290267|FBtr0290267|FBtr0290267|FBtr0081021|FBtr0081021|FBtr0081021|FBtr0340182|FBtr0340182|FBtr0340182|FBtr0081022|FBtr0081022|FBtr0081022 17973392|17973392|17973392|17973392|17973392|17973392|17973392|17973392|17973392|17972122|17972122|17972122 17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868 2L + 17974295 17974344 3'utr CG5674 FlyBase G5045.1 TTATTTTGTATCTTTGGACTAAAAACACATTGTGATAAAATGCACCATGA 101 17974324 0.830697806 5 93 569 0.93495935 1.28254659 0.154471545 0.188118812 0.333333333 101 3 5 115 2L:17974295-17974344 7 CG5674 FBtr0340182|FBtr0340182|FBtr0340182|FBtr0081022|FBtr0081022|FBtr0081022|FBtr0290267|FBtr0290267|FBtr0290267|FBtr0081021|FBtr0081021|FBtr0081021 17973392|17973392|17973392|17972122|17972122|17972122|17973392|17973392|17973392|17973392|17973392|17973392 17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 17974288 17974353 3'utr CG5674 FlyBase G3924.1 AAATAGTTTATTTTGTATCTTTGGACTAAAAACACATTGTGATAAAATGCACCATGAGCTTTAGAG 75 17974324 0.810359648 6 72 415 0.971962617 1.414973348 0.186915888 0.32 0.523364486 75 0 3 104 2L:17974288-17974353 7 71.5 263 FBgn0032656 133.77 5.08 7.833333333 0.534499514 14.07480315 9.127659574 1 1 1 0.15 dme-miR-12-5p 6mer3-8 AATACT 2L 17974708 17974713 + 2L_17974708_17974713_+ 0.922848226 0.930911028 0.926879627 0.005701261 CG5674 FBtr0290267|FBtr0081021|FBtr0340182|FBtr0081022 17973392|17973392|17973392|17972122 17974868|17974868|17974868|17974868 2L + 17974683 17974741 3'utr CG5674 FlyBase G5049.1 TGTTTAGCTAAGTGATAGGAGACACAATACTTGCAAGTTTAGGATGATACGATCTACAA 17 17974710 0.963778407 5 17 91 1 1.301029996 0.1 0.176470588 0.3 17 0 0 20 2L:17974683-17974741 6 CG5674 FBtr0340182|FBtr0081022|FBtr0290267|FBtr0081021 17973392|17972122|17973392|17973392 17974868|17974868|17974868|17974868 AATACT 6mer3-8 dme-miR-12-5p 2L + 17974682 17974733 3'utr CG5674 FlyBase G3928.1 TTGTTTAGCTAAGTGATAGGAGACACAATACTTGCAAGTTTAGGATGATACG 11 17974710 0.978394521 5 9 62 0.875 1.146128036 0.25 0.454545455 0.625 11 2 0 14 2L:17974682-17974733 6 11 264 FBgn0032656 133.77 5.08 7.833333333 0.082230694 2.165354331 1.404255319 -2 -2 -2 0.15 dme-miR-304-5p 7mer-m8 TGAGATT 2L 18129026 18129032 + 2L_18129026_18129032_+ 0.62018926 0.620203142 0.620196201 9.76E-06 CG5758 FBtr0081037|FBtr0340577|FBtr0340575|FBtr0081036|FBtr0081035|FBtr0340576 18128943|18128943|18128943|18128943|18128943|18128943 18129862|18129862|18129862|18129862|18129862|18129862 2L + 18128986 18129128 3'utr CG5758 FlyBase G5059.1 TATCGCGATGGTAAATGCGAAAATAACACAGGCGGCACTTTGAGATTGTTTTTGGGATCCCTCAATCGGCCTTCGAGTCTTGTATCAGTCTATTTCCGAAGTAGGAGACATTCCAGGCCCTTCGACAATTAGTCTATTGTCGC 39 18129025 0.978304154 14 39 258 1 1.681241237 0.0625 0.179487179 0.333333333 39 0 0 48 2L:18128986-18129128 7 CG5758 FBtr0081035|FBtr0340576|FBtr0340575|FBtr0081036|FBtr0081037|FBtr0340577 18128943|18128943|18128943|18128943|18128943|18128943 18129862|18129862|18129862|18129862|18129862|18129862 TGAGATT 7mer-m8 dme-miR-304-5p 2L + 18129013 18129071 3'utr CG5758 FlyBase G3934.1 ACAGGCGGCACTTTGAGATTGTTTTTGGGATCCCTCAATCGGCCTTCGAGTCTTGTATC 9 18129025 0.954842385 7 9 67 1 1.146128036 0 0.444444444 0.642857143 9 0 0 14 2L:18129013-18129071 7 11 265 FBgn0032666 5 0.196666667 0.306666667 2.2 55.93220339 35.86956522 1 1 1 0.15 dme-bantam-3p 6mer3-8 TGATCT 2L 18129181 18129186 + 2L_18129181_18129186_+ 0.714471297 0.823247486 0.768859391 0.076916389 CG5758 FBtr0081037|FBtr0340577|FBtr0340575|FBtr0081036|FBtr0081035|FBtr0340576 18128943|18128943|18128943|18128943|18128943|18128943 18129862|18129862|18129862|18129862|18129862|18129862 2L + 18129136 18129353 3'utr CG5758 FlyBase G5060.1 TATTTTGGCAATTAATTAGCAGTATGTACAATATTTTTTTGCAATTGATCTGCGTTAGAGGAACGAATGTGAGAGGGAGGCGAGCGCTAAAAGCGTTTTTGTATAGTTCTGGGCTAATTTTGTAACGAATTTTTCTAGTTTAGTTCTTAGTTTTTCATGTATGTTTTAAGTTTAGCATTGAACGAGGCGGTGAAACGAAGTATACTACAAAGTCAACA 213 18129182 0.98306767 26 209 1617 0.984063745 2.392696953 0.470119522 0.145539906 0.274900398 213 4 0 247 2L:18129136-18129353 6 CG5758 FBtr0081035|FBtr0340576|FBtr0340575|FBtr0081036|FBtr0081037|FBtr0340577 18128943|18128943|18128943|18128943|18128943|18128943 18129862|18129862|18129862|18129862|18129862|18129862 TGATCT 6mer3-8 dme-bantam-3p 2L + 18129134 18129221 3'utr CG5758 FlyBase G3936.1 ATTATTTTGGCAATTAATTAGCAGTATGTACAATATTTTTTTGCAATTGATCTGCGTTAGAGGAACGAATGTGAGAGGGAGGCGAGCG 109 18129182 0.983885704 10 100 743 0.921212121 1.704722333 0.503030303 0.311926606 0.545454545 109 11 2 152 2L:18129134-18129221 6 137 266 FBgn0032666 5 0.196666667 0.306666667 27.4 696.6101695 446.7391304 -1 -1 -1 0.15 dme-miR-305-5p 6mer2-7 GTACAA 2L 18130050 18130055 - 2L_18130050_18130055_- 0.9704385 0.973876947 0.972157724 0.002431316 kel FBtr0081043|FBtr0081042 18129882|18129882 18130773|18133613 2L - 18130035 18130158 3'utr kel FlyBase G11245.1 ACTCAAATTTCCATTACCCCATGGCATTTGGCACATGGACCGCTTCGTTTCAGTATGTTAAGTTATGGCTTTAAACCGGAACAATAATATTTAGCCAACTATTGTACAAGCTCTCCACTAGAAT 48 18130057 0.975265359 11 47 299 1 1.716003344 0.057692308 0.083333333 0.153846154 48 0 0 52 2L:18130035-18130158 6 kel FBtr0081043|FBtr0081042 18129882|18129882 18130773|18133613 GTACAA 6mer2-7 dme-miR-305-5p 2L - 18130013 18130097 3'utr kel FlyBase G8649.1 GTTATGGCTTTAAACCGGAACAATAATATTTAGCCAACTATTGTACAAGCTCTCCACTAGAATCCTATTGTTTAAGTCAATTAGA 28 18130057 0.976181702 5 26 159 0.921568627 1.672097858 0.137254902 0.5 0.725490196 28 4 0 47 2L:18130013-18130097 6 29.5 267 FBgn0001301 597.3333333 13.11666667 20.1 0.049386161 2.249047014 1.467661692 2 2 2 0.15 dme-bantam-3p 7mer-A1 GATCTCA 2L 18130470 18130476 - 2L_18130470_18130476_- 0.823257267 0.823270586 0.823263927 9.40E-06 kel FBtr0081043|FBtr0081042 18129882|18129882 18130773|18133613 2L - 18130442 18130507 3'utr kel FlyBase G11247.1 TTTCTAATTACAACGCTGCTCTACAAAATTGGATCTCAAAACAATACAAGCATAACGAATCGACCA 383 18130478 0.984834489 5 375 3033 0.976905312 2.325310372 0.018475751 0.104438642 0.207852194 383 9 1 423 2L:18130442-18130507 7 kel FBtr0081043|FBtr0081042 18129882|18129882 18130773|18133613 GATCTCA 7mer-A1 dme-bantam-3p 2L - 18130442 18130506 3'utr kel FlyBase G8652.1 TTCTAATTACAACGCTGCTCTACAAAATTGGATCTCAAAACAATACAAGCATAACGAATCGACCA 192 18130478 0.951201856 8 184 1509 0.957692308 2.396199347 0.034615385 0.270833333 0.461538462 192 11 0 249 2L:18130442-18130506 7 280 268 FBgn0001301 597.3333333 13.11666667 20.1 0.46875 21.34688691 13.93034826 2 2 2 0.15 dme-miR-184-5p 6mer3-8 TGATAA 2L 18130853 18130858 - 2L_18130853_18130858_- 0.995855071 0.997158356 0.996506713 0.000921572 kel FBtr0081042 18129882 18133613 2L - 18130798 18130877 3'utr kel FlyBase G11249.1 TAGATCCTGTCAGCTTAAGTGATAACGAGACTGAGACAACCAGCAGTCAAAACAACCTTCCAAGCACTACCAACAGCAAT 28 18130861 0.931365828 7 25 126 0.911764706 1.190331698 0.029411765 0.214285714 0.352941176 28 2 1 31 2L:18130798-18130877 6 kel FBtr0081042 18129882 18133613 TGATAA 6mer3-8 dme-miR-184-5p 2L - 18130831 18130876 3'utr kel FlyBase G8655.1 AGATCCTGTCAGCTTAAGTGATAACGAGACTGAGACAACCAGCAGT 15 18130862 0.958700917 5 14 69 0.884615385 1.361727836 0.115384615 0.4 0.653846154 15 3 0 23 2L:18130831-18130876 6 19.5 269 FBgn0001301 597.3333333 13.11666667 20.1 0.032645089 1.486658196 0.970149254 3 4 3.5 0.15 dme-miR-252-5p 6mer3-8 GTACTT 2L 18532142 18532147 - 2L_18532142_18532147_- 0.818377703 0.902557824 0.860467763 0.05952432 Pde11 FBtr0303163|FBtr0343830 18532023|18532023 18534130|18533334 2L - 18532120 18532171 3'utr Pde11 FlyBase G11321.1 TGTAATCCTTCTTTAGACTAGATTGTACTTTGTGAGTTTTGTTATTTATTGT 8 18532159 0.795966705 4 8 101 1 1 0 0.25 0.4 8 0 0 10 2L:18532120-18532171 6 Pde11 FBtr0343830|FBtr0303163 18532023|18532023 18533334|18534130 GTACTT 6mer3-8 dme-miR-252-5p 2L - 18532125 18532168 3'utr Pde11 FlyBase G8708.1 AATCCTTCTTTAGACTAGATTGTACTTTGTGAGTTTTGTTATTT 11 18532159 0.762208606 5 9 116 0.857142857 0.77815125 0.142857143 0.272727273 0.428571429 11 1 1 12 2L:18532125-18532168 6 8.5 270 FBgn0085370 2569.533333 47.93666667 73.66666667 0.003307994 0.177317294 0.115384615 12 12 12 0.15 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 18532523 18532528 - 2L_18532523_18532528_- 0.98939339 0.873230568 0.931311979 0.082139504 Pde11 FBtr0303163|FBtr0343830 18532023|18532023 18534130|18533334 2L - 18532494 18532582 3'utr Pde11 FlyBase G11323.1 TTATCTCTATGGGTACCAAAAGTCTAACTTTAGTAGCATTAACCAACCGCTTAGTGATGATGTTAGCTGTCAAGTAACGAGAAACCGAT 30 18532532 0.980472453 8 30 212 1 1.612783857 0.073170732 0.266666667 0.463414634 30 0 0 41 2L:18532494-18532582 6 Pde11 FBtr0343830|FBtr0303163 18532023|18532023 18533334|18534130 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L - 18532472 18532586 3'utr Pde11 FlyBase G8709.1 TGAATTATCTCTATGGGTACCAAAAGTCTAACTTTAGTAGCATTAACCAACCGCTTAGTGATGATGTTAGCTGTCAAGTAACGAGAAACCGATCCGATCGCGAGCCTAGATTGTA 22 18532532 0.977051825 10 21 134 0.965517241 1.447158031 0.068965517 0.227272727 0.413793103 22 1 0 28 2L:18532472-18532586 6 19 271 FBgn0085370 2569.533333 47.93666667 73.66666667 0.007394339 0.396356303 0.257918552 4 4 4 0.15 dme-bantam-3p 6mer3-8 TGATCT 2L 18532881 18532886 - 2L_18532881_18532886_- 0.999320332 0.999929952 0.999625142 0.000431123 Pde11 FBtr0303162|FBtr0303163|FBtr0343830|FBtr0112544|FBtr0343831|FBtr0112545 18532726|18532023|18532023|18532726|18532726|18532726 18534130|18534130|18533334|18533334|18533334|18533334 2L - 18532857 18532899 3'utr Pde11 FlyBase G11326.1 TATGTGTATATTCTGATCTGTGTGTGTTTGTAACTTAAATTTT 14 18532886 0.735108972 5 10 164 0.6875 0.740362689 0.5 0.142857143 0.25 14 4 1 11 2L:18532857-18532899 6 Pde11 FBtr0112545|FBtr0343831|FBtr0112544|FBtr0343830|FBtr0303163|FBtr0303162 18532726|18532726|18532726|18532023|18532023|18532726 18533334|18533334|18533334|18533334|18534130|18534130 TGATCT 6mer3-8 dme-bantam-3p 2L - 18532869 18532900 3'utr Pde11 FlyBase G8711.1 GTATGTGTATATTCTGATCTGTGTGTGTTTGT 12 18532886 0.761587683 4 8 122 0.928571429 1.113943352 0.642857143 0.083333333 0.214285714 12 1 0 13 2L:18532869-18532900 6 11 272 FBgn0085370 2569.533333 47.93666667 73.66666667 0.004280933 0.229469439 0.149321267 0 0 0 0.15 dme-miR-11-3p 7mer-m1 TGTGATG 2L 18533243 18533249 - 2L_18533243_18533249_- 0.521551451 0.518430317 0.519990884 0.002207022 Pde11 FBtr0303162|FBtr0303163|FBtr0343830|FBtr0112544|FBtr0343831|FBtr0112545 18532726|18532023|18532023|18532726|18532726|18532726 18534130|18534130|18533334|18533334|18533334|18533334 2L - 18533222 18533277 3'utr Pde11 FlyBase G11329.1 TTTAACATGATAACTCTTAAACCACATATGTGATGCCTAAAAGTATGCAAGAAATC 11 18533251 0.977564917 3 10 60 0.857142857 1.079181246 0.071428571 0.272727273 0.428571429 11 2 0 12 2L:18533222-18533277 7 Pde11 FBtr0112545|FBtr0343831|FBtr0112544|FBtr0343830|FBtr0303163|FBtr0303162 18532726|18532726|18532726|18532023|18532023|18532726 18533334|18533334|18533334|18533334|18534130|18534130 TGTGATG 7mer-m1 dme-miR-11-3p 2L - 18533234 18533331 3'utr Pde11 FlyBase G8713.1 CATCCCAATCTGGTGTGTTCCTAGAAACTCGGAAACAGATTAAAGGGGATCATATTTAACATGATAACTCTTAAACCACATATGTGATGCCTAAAAGT 15 18533251 0.848829717 7 14 93 0.961538462 1.397940009 0 0.333333333 0.615384615 15 1 0 25 2L:18533234-18533331 7 7.5 273 FBgn0085370 2569.533333 47.93666667 73.66666667 0.002918818 0.156456436 0.101809955 2 2 2 0.15 dme-miR-276a-3p 7mer-A1 GTTCCTA 2L 18533309 18533315 - 2L_18533309_18533315_- 0.775983285 0.345694692 0.560838988 0.304259987 Pde11 FBtr0303162|FBtr0303163|FBtr0343830|FBtr0112544|FBtr0343831|FBtr0112545 18532726|18532023|18532023|18532726|18532726|18532726 18534130|18534130|18533334|18533334|18533334|18533334 2L - 18533300 18533331 3'utr Pde11 FlyBase G11330.1 CATCCCAATCTGGTGTGTTCCTAGAAACTCGG 7 18533320 0.65789402 3 5 50 0.777777778 0.84509804 0 0.285714286 0.444444444 7 2 0 7 2L:18533300-18533331 7 Pde11 FBtr0112545|FBtr0343831|FBtr0112544|FBtr0343830|FBtr0303163|FBtr0303162 18532726|18532726|18532726|18532023|18532023|18532726 18533334|18533334|18533334|18533334|18534130|18534130 GTTCCTA 7mer-A1 dme-miR-276a-3p 2L - 18533234 18533331 3'utr Pde11 FlyBase G8713.1 CATCCCAATCTGGTGTGTTCCTAGAAACTCGGAAACAGATTAAAGGGGATCATATTTAACATGATAACTCTTAAACCACATATGTGATGCCTAAAAGT 15 18533322 0.848829717 7 14 93 0.961538462 1.397940009 0 0.333333333 0.615384615 15 1 0 25 2L:18533234-18533331 7 6 274 FBgn0085370 2569.533333 47.93666667 73.66666667 0.002335054 0.125165148 0.081447964 5 7 6 0.15 dme-miR-14-3p 6mer3-8 AAGACT 2L 18599774 18599779 - 2L_18599774_18599779_- 0.996053824 0.999996402 0.998025113 0.002787839 CG10413 FBtr0081080|FBtr0343829 18599753|18599753 18600609|18600609 2L - 18599754 18599910 3'utr CG10413 FlyBase G11351.1 GGACGGACATTGATCGATTGTCGTAGACAAGTGTTTTGTGTGTGTAAACTTTATGGAACTGTGACCTAGCTAATAATATAATAATTGATCACAGCATTCATTGTAATCGGTTCTTTCCAATATTTTAAATAAAGACTTAGCGATATGTATTTATGTA 32 18599774 0.966256522 15 31 251 0.974358974 1.579783597 0.051282051 0.15625 0.307692308 32 1 0 38 2L:18599754-18599910 6 CG10413 FBtr0343829|FBtr0081080 18599753|18599753 18600609|18600609 AAGACT 6mer3-8 dme-miR-14-3p 2L - 18599759 18599824 3'utr CG10413 FlyBase G8729.1 GATCACAGCATTCATTGTAATCGGTTCTTTCCAATATTTTAAATAAAGACTTAGCGATATGTATTT 15 18599774 0.831795305 6 14 128 1 1.322219295 0.095238095 0.266666667 0.476190476 15 0 0 21 2L:18599759-18599824 6 13 275 FBgn0032689 528.2066667 16.84 25.75 0.024611579 0.771971496 0.504854369 -5 -5 -5 0.15 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 18599962 18599967 - 2L_18599962_18599967_- 0.999909343 0.999992681 0.999951012 5.90E-05 CG10413 FBtr0081080|FBtr0343829 18599753|18599753 18600609|18600609 2L - 18599921 18599982 3'utr CG10413 FlyBase G11352.1 TTGTGGTTGTAAAATTGATGATTTCATATTGCACTTAGTTTGTAATCCATTTTTGGAAGACC 13 18599943 0.991598997 8 12 138 0.928571429 1.113943352 0.071428571 0.076923077 0.142857143 13 1 0 13 2L:18599921-18599982 6 CG10413 FBtr0343829|FBtr0081080 18599753|18599753 18600609|18600609 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L - 18599888 18599974 3'utr CG10413 FlyBase G8731.1 GTAAAATTGATGATTTCATATTGCACTTAGTTTGTAATCCATTTTTGGAAGACCTTCACAGCTCGGACGGACATTGATCGATTGTCG 10 18599964 0.994864959 6 8 90 0.866666667 1.113943352 0.266666667 0.3 0.533333333 10 2 0 13 2L:18599888-18599974 6 6 276 FBgn0032689 528.2066667 16.84 25.75 0.01135919 0.356294537 0.233009709 -24 -3 -13.5 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 2L 18600059 18600065 - 2L_18600059_18600065_- 0.521223821 0.52121525 0.521219535 6.08E-06 CG10413 FBtr0081080|FBtr0343829 18599753|18599753 18600609|18600609 2L - 18600045 18600080 3'utr CG10413 FlyBase G11353.1 CGATATTAACCTCTTTGTGATTGATTATGAATATCT 24 18600066 0.621603319 4 22 235 0.911764706 0.889301703 0.058823529 0.291666667 0.5 24 0 3 31 2L:18600045-18600080 7 CG10413 FBtr0343829|FBtr0081080 18599753|18599753 18600609|18600609 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 18600045 18600094 3'utr CG10413 FlyBase G8732.1 AACGGAACTCACACCGATATTAACCTCTTTGTGATTGATTATGAATATCT 19 18600066 0.991504092 5 17 187 0.869565217 0.698970004 0 0.210526316 0.347826087 19 0 3 20 2L:18600045-18600094 7 21 277 FBgn0032689 528.2066667 16.84 25.75 0.039757166 1.247030879 0.815533981 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 18661256 18661263 + 2L_18661256_18661263_+ 0.650114388 0.650143996 0.650129192 2.09E-05 MESR3 FBtr0343808|FBtr0343808|FBtr0343808|FBtr0329971|FBtr0329971|FBtr0329971|FBtr0329972|FBtr0329972|FBtr0329972|FBtr0081073|FBtr0081073|FBtr0081073 18661050|18661050|18661050|18661104|18661104|18661104|18661050|18661050|18661050|18661050|18661050|18661050 18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776 2L + 18661020 18661494 stop_codon MESR3 FlyBase G5088.1 TCGGACCCCCCAATCCCCAGCAGCATCGTTGAGTAGGGTCGGGCGCGTGGATCTGGAACACGAGCGCCCTATGGTGGCAGAACTGAATCTGCCTCGAAGCCACAACCCAACACAACCACGAAGAAATCCAGGAAAAACCAACCCTTAGTTCGTATGGCTAGTTATAGATCCATTTGTTATAGGCCTAAGTTATGCCAATGTGCGATCCGAGTGCGGAACTCGGCCAACACATTTATCTGTGATACGATTTAGGCGTCTTTACTTTAGAGAGGGATACTGATAACACAATTTGATAAAGAACATTTTTAAACGAAGAACATAGCAAATGAAGCGAGAGTTTTTGCAAGTTATTAAAACATATTAAGCGATTAACGTTTGTCGATAAGCAAGTTTTTTGTAAAACCTTTTCTAATATCACACATATACCCTTATGCATAATTATATTCGTACCATATAGTCCTGATATCTATCGAGT 1283 18661255 0.98555517 81 1160 9566 0.906088083 1.730844367 0.305051813 0.163678878 0.305051813 1283 120 25 1399 2L:18661020-18661494 8 MESR3 FBtr0081073|FBtr0081073|FBtr0081073|FBtr0329972|FBtr0329972|FBtr0329972|FBtr0329971|FBtr0329971|FBtr0329971|FBtr0343808|FBtr0343808|FBtr0343808 18661050|18661050|18661050|18661050|18661050|18661050|18661104|18661104|18661104|18661050|18661050|18661050 18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 18661173 18661408 3'utr MESR3 FlyBase G3962.2 ATGGCTAGTTATAGATCCATTTGTTATAGGCCTAAGTTATGCCAATGTGCGATCCGAGTGCGGAACTCGGCCAACACATTTATCTGTGATACGATTTAGGCGTCTTTACTTTAGAGAGGGATACTGATAACACAATTTGATAAAGAACATTTTTAAACGAAGAACATAGCAAATGAAGCGAGAGTTTTTGCAAGTTATTAAAACATATTAAGCGATTAACGTTTGTCGATAAGCAA 766 18661255 0.96837547 45 670 5377 0.886054422 1.762595214 0.308673469 0.392950392 0.604591837 766 117 17 1042 2L:18661173-18661408 8 589.5 278 FBgn0032694 1795.86 104.38 160.0933333 0.328254986 5.647633646 3.682227034 1 1 1 0.15 dme-miR-92b-3p 6mer3-8 GTGCAA 2L 18661728 18661733 + 2L_18661728_18661733_+ 1 1 1 0 MESR3 FBtr0343808|FBtr0329971|FBtr0329972|FBtr0081073 18661050|18661104|18661050|18661050 18661776|18661776|18661776|18661776 2L + 18661629 18661772 3'utr MESR3 FlyBase G5090.1 ACATAAATATATATGCTATATTACACCTATCTATATATTATATATAGCTCTAAGCATTACATCATAGCCACTTGTCTGTATGAACTTCATATTTTGCCTGTGCAAAACAATCGCGAGAATCAAATAAAGCTGACAAAGAGAGCC 39 18661701 0.983022018 21 33 287 0.860465116 1.091080469 0.069767442 0.102564103 0.186046512 39 4 2 37 2L:18661629-18661772 6 MESR3 FBtr0081073|FBtr0329972|FBtr0329971|FBtr0343808 18661050|18661050|18661104|18661050 18661776|18661776|18661776|18661776 GTGCAA 6mer3-8 dme-miR-92b-3p 2L + 18661687 18661774 3'utr MESR3 FlyBase G3965.1 ACATCATAGCCACTTGTCTGTATGAACTTCATATTTTGCCTGTGCAAAACAATCGCGAGAATCAAATAAAGCTGACAAAGAGAGCCAA 15 18661704 0.982719571 8 13 102 0.846153846 1.342422681 0.076923077 0.466666667 0.692307692 15 4 0 22 2L:18661687-18661774 6 8 279 FBgn0032694 1795.86 104.38 160.0933333 0.00445469 0.076643035 0.04997085 27 24 25.5 0.15 dme-miR-995-5p 6mer3-8 AATTCG 2L 18684523 18684528 - 2L_18684523_18684528_- 0.834145635 0.995739784 0.91494271 0.114264355 msl-1 FBtr0081130 18683718 18685245 2L - 18684499 18684547 3'utr msl-1 FlyBase G11387.1 TTTTGGAGAAAAACAATGAAATTCGTAGACTTATATTTTTAAATATTTT 60 18684522 0.796462289 7 58 577 0.985074627 1.819543936 0.044776119 0.1 0.194029851 60 1 0 66 2L:18684499-18684547 6 msl-1 FBtr0081130 18683718 18685245 AATTCG 6mer3-8 dme-miR-995-5p 2L - 18684499 18684534 3'utr msl-1 FlyBase G8751.1 CAATGAAATTCGTAGACTTATATTTTTAAATATTTT 53 18684522 0.778774341 7 48 545 0.901234568 1.562292864 0.086419753 0.377358491 0.592592593 53 7 1 73 2L:18684499-18684534 6 55.5 280 FBgn0005617 2040.813333 60.53666667 92.9 0.02719504 0.916799736 0.597416577 -6 -6 -6 0.15 dme-miR-79-3p 7mer-A1 AGCTTTA 2L 18684620 18684626 - 2L_18684620_18684626_- 0.822388003 0.800306938 0.811347471 0.015613696 msl-1 FBtr0081130 18683718 18685245 2L - 18684561 18684647 3'utr msl-1 FlyBase G11388.1 TTAGATTGGTTAACTCATCTCAGCTTTATCACCTTTAAAATCGCCCGCACTAAAGTGATAAGAACACGAAAGATATTCACATAAGTT 35 18684628 0.991579344 4 30 316 0.780487805 1.204119983 0.073170732 0.085714286 0.219512195 35 8 1 32 2L:18684561-18684647 7 msl-1 FBtr0081130 18683718 18685245 AGCTTTA 7mer-A1 dme-miR-79-3p 2L - 18684600 18684664 3'utr msl-1 FlyBase G8752.1 TCAAACCAGTCGCTTAGTTAGATTGGTTAACTCATCTCAGCTTTATCACCTTTAAAATCGCCCGC 23 18684630 0.990693712 6 20 213 0.9375 1.176091259 0.1875 0.260869565 0.46875 23 1 1 30 2L:18684600-18684664 7 26.5 281 FBgn0005617 2040.813333 60.53666667 92.9 0.012985019 0.437751225 0.28525296 2 4 3 0.15 dme-miR-2a-2-5p 7mer-A1 GATGAGA 2L 18684905 18684911 - 2L_18684905_18684911_- 0.724459886 0.691721569 0.708090727 0.023149474 msl-1 FBtr0081130 18683718 18685245 2L - 18684860 18684924 3'utr msl-1 FlyBase G11390.1 TCGTTTCTTATGCGATGAGAGATCTTAAAAGGCAAGTAAATTGAGCTGTCCTATTCAAACATTTT 7 18684914 0.988381823 5 6 51 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 2L:18684860-18684924 7 msl-1 FBtr0081130 18683718 18685245 GATGAGA 7mer-A1 dme-miR-2a-2-5p 2L - 18684891 18684931 3'utr msl-1 FlyBase G8753.1 AGTTTTGTCGTTTCTTATGCGATGAGAGATCTTAAAAGGCA 7 18684914 0.812968305 3 7 57 1 1.041392685 0.090909091 0.285714286 0.545454545 7 0 0 11 2L:18684891-18684931 7 4.5 282 FBgn0005617 2040.813333 60.53666667 92.9 0.002205003 0.074335114 0.048439182 3 3 3 0.15 dme-miR-14-3p 7mer-m8 AAGACTG 2L 18685199 18685205 - 2L_18685199_18685205_- 0.668306369 0.671735661 0.670021015 0.002424881 msl-1 FBtr0081130|FBtr0343118 18683718|18684982 18685245|18685245 2L - 18685175 18685243 3'utr msl-1 FlyBase G11392.1 AGGAAACGCCTGGGGGATCTGATACTGGAGCTAAGCAGAAGACTGTCGGTTGGGGGAAGTCGTTGCGTT 20 18685195 0.714050345 7 16 96 0.772727273 0.753327667 0.136363636 0.1 0.181818182 20 3 2 17 2L:18685175-18685243 7 msl-1 FBtr0343118|FBtr0081130 18684982|18683718 18685245|18685245 AAGACTG 7mer-m8 dme-miR-14-3p 2L - 18685179 18685237 3'utr msl-1 FlyBase G8755.1 CGCCTGGGGGATCTGATACTGGAGCTAAGCAGAAGACTGTCGGTTGGGGGAAGTCGTTG 17 18685196 0.974253973 7 12 75 0.7 1.146128036 0.1 0.176470588 0.3 17 6 0 14 2L:18685179-18685237 7 13 283 FBgn0005617 2040.813333 60.53666667 92.9 0.006370009 0.214745884 0.139935414 -10 -9 -9.5 0.15 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2L 18697931 18697936 + 2L_18697931_18697936_+ 0.80219802 0.830436311 0.816317165 0.019967493 CG10338 FBtr0343108|FBtr0081096 18697884|18697884 18698571|18698571 2L + 18697874 18697946 stop_codon CG10338 FlyBase G5102.1 TGGAAGGTGTAGGAGAATGGTGACTTTGATTGCTAGATTTTGACCTTAGTTGCTTGCTTTGACCTGAAGAATT 53 18697931 0.713999041 6 50 395 0.949152542 1.447158031 0.13559322 0.094339623 0.186440678 53 2 1 56 2L:18697874-18697946 6 CG10338 FBtr0081096|FBtr0343108 18697884|18697884 18698571|18698571 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2L + 18697913 18697955 3'utr CG10338 FlyBase G3974.1 TTGACCTTAGTTGCTTGCTTTGACCTGAAGAATTAATTTCATT 25 18697931 0.731040271 4 24 197 0.951219512 1.591064607 0.195121951 0.48 0.682926829 25 2 0 39 2L:18697913-18697955 6 34.5 284 FBgn0032700 302.7966667 15.66333333 24.19 0.113937846 2.202596297 1.426209177 0 0 0 0.15 dme-miR-283-5p 8mer-A1 TGATATTA 2L 18698010 18698017 + 2L_18698010_18698017_+ 0.58900204 0.589194939 0.58909849 0.000136401 CG10338 FBtr0343108|FBtr0081096 18697884|18697884 18698571|18698571 2L + 18697947 18698031 3'utr CG10338 FlyBase G5103.1 AATTTCATTAGACTTCATTATCATTCTCACATATCTCACATGGCTACCATAGAGCGAAAACATTGATATTAACTAAGTGCTATTG 16 18698009 0.897352355 4 16 108 1 1.255272505 0.222222222 0.125 0.222222222 16 0 0 18 2L:18697947-18698031 8 CG10338 FBtr0081096|FBtr0343108 18697884|18697884 18698571|18698571 TGATATTA 8mer-A1 dme-miR-283-5p 2L + 18697977 18698020 3'utr CG10338 FlyBase G3975.1 ATATCTCACATGGCTACCATAGAGCGAAAACATTGATATTAACT 8 18698009 0.968120893 2 7 41 0.928571429 1.113943352 0 0.5 0.714285714 8 1 0 13 2L:18697977-18698020 8 8.5 285 FBgn0032700 302.7966667 15.66333333 24.19 0.028071643 0.542668653 0.35138487 1 1 1 0.15 dme-miR-79-3p 7mer-m8 TAGCTTT 2L 18698047 18698053 + 2L_18698047_18698053_+ 0.539991643 0.620203573 0.580097608 0.056718449 CG10338 FBtr0343108|FBtr0081096 18697884|18697884 18698571|18698571 2L + 18698034 18698104 3'utr CG10338 FlyBase G5104.1 ATTTACCTAGATTTAGCTTTGTGAATCTCGTTCGCACTTGAACATCTTCCAACTAACTCTGCCTTAGCACA 26 18698055 0.870797669 5 25 237 0.965517241 1.447158031 0.172413793 0.115384615 0.206896552 26 1 0 28 2L:18698034-18698104 7 CG10338 FBtr0081096|FBtr0343108 18697884|18697884 18698571|18698571 TAGCTTT 7mer-m8 dme-miR-79-3p 2L + 18698027 18698072 3'utr CG10338 FlyBase G3976.1 TATTGATATTTACCTAGATTTAGCTTTGTGAATCTCGTTCGCACTT 14 18698055 0.989808043 6 13 136 0.869565217 1.301029996 0.260869565 0.5 0.695652174 14 3 0 20 2L:18698027-18698072 7 17 286 FBgn0032700 302.7966667 15.66333333 24.19 0.056143286 1.085337306 0.70276974 -8 -8 -8 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 18701315 18701321 - 2L_18701315_18701321_- 0.754178803 0.754177288 0.754178045 1.06E-06 CG10376 FBtr0081128|FBtr0081128|FBtr0081128 18700604|18700604|18700604 18701626|18701626|18701626 2L - 18701307 18701334 3'utr CG10376 FlyBase G11433.1 CGCAATCGTTTAATGTGATACAACGAAA 6 18701322 0.680065494 5 6 35 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2L:18701307-18701334 7 CG10376 FBtr0081128|FBtr0081128|FBtr0081128 18700604|18700604|18700604 18701626|18701626|18701626 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 18701309 18701368 3'utr CG10376 FlyBase G8783.1 ATATAATCCATTTTCTAAAAGATTATTGAACGTACGCAATCGTTTAATGTGATACAACGA 5 18701322 0.977643299 4 5 39 1 0.698970004 0 0 0 5 0 0 5 2L:18701309-18701368 7 4.5 287 FBgn0032702 2337.326667 113.6933333 174.6866667 0.001925276 0.039580157 0.025760409 1 1 1 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 2L 18701559 18701565 - 2L_18701559_18701565_- 0.782911673 0.782748705 0.782830189 0.000115258 CG10376 FBtr0081128 18700604 18701626 2L - 18701546 18701587 3'utr CG10376 FlyBase G11434.1 CGCCTTGGGATGGGTTAATTTTGTACAAATTCAAAGCAACTT 10 18701568 0.925135535 5 8 87 0.923076923 0.77815125 0.076923077 0.2 0.384615385 10 0 1 12 2L:18701546-18701587 7 CG10376 FBtr0081128 18700604 18701626 GTACAAA 7mer-A1 dme-miR-305-5p 2L - 18701555 18701591 3'utr CG10376 FlyBase G8784.1 TACCCGCCTTGGGATGGGTTAATTTTGTACAAATTCA 6 18701567 0.917906071 3 5 48 1 0.84509804 0.428571429 0.166666667 0.285714286 6 0 0 7 2L:18701555-18701591 7 6.5 288 FBgn0032702 2337.326667 113.6933333 174.6866667 0.002780955 0.057171338 0.03720948 3 2 2.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 18704413 18704419 + 2L_18704413_18704419_+ 0.753672121 0.753651735 0.753661928 1.44E-05 CG10343 FBtr0081098|FBtr0081098|FBtr0081098 18704335|18704335|18704335 18704454|18704454|18704454 2L + 18704368 18704427 3'utr CG10343 FlyBase G5115.1 CATCGAGGAAACCTTAAATTGAAATCAAAAGCCAATACTATTTTATGTGATAGAATAAAC 13 18704409 0.975584137 4 11 100 0.857142857 1.079181246 0.142857143 0.076923077 0.142857143 13 2 0 12 2L:18704368-18704427 7 CG10343 FBtr0081098|FBtr0081098|FBtr0081098 18704335|18704335|18704335 18704454|18704454|18704454 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 18704372 18704452 3'utr CG10343 FlyBase G3989.1 GAGGAAACCTTAAATTGAAATCAAAAGCCAATACTATTTTATGTGATAGAATAAACGCGAGTAACTGCATGGGCGGCTATC 7 18704409 0.98105319 4 7 43 1 1 0 0.428571429 0.6 7 0 0 10 2L:18704372-18704452 7 7 289 FBgn0032703 216.33 32.94333333 50.78 0.032357972 0.212486087 0.137849547 4 4 4 0.15 dme-miR-184-3p 6mer3-8 TCCGTC 2L 18706203 18706208 - 2L_18706203_18706208_- 0.999625096 0.966500385 0.98306274 0.0234227 Faf FBtr0343115 18706008 18706532 2L - 18706175 18706235 3'utr Faf FlyBase G11451.1 CGTTGTTATGTTAGCTGTACTTATACTTCCGTCTATTTAACGAATAATAGAGGCACATTCT 12 18706209 0.990508639 6 12 124 1 1.230448921 0.058823529 0.333333333 0.529411765 12 0 0 17 2L:18706175-18706235 6 Faf FBtr0343115 18706008 18706532 TCCGTC 6mer3-8 dme-miR-184-3p 2L - 18706197 18706228 3'utr Faf FlyBase G8798.1 ATGTTAGCTGTACTTATACTTCCGTCTATTTA 8 18706209 0.789001306 2 8 82 1 1.079181246 0 0.375 0.583333333 8 0 0 12 2L:18706197-18706228 6 9 290 FBgn0025608 1253.34 66.89333333 102.5866667 0.007180813 0.134542555 0.087730699 1 1 1 0.15 dme-bantam-3p 6mer3-8 TGATCT 2L 18706342 18706347 - 2L_18706342_18706347_- 0.999987813 0.999459809 0.999723811 0.000373352 Faf FBtr0343115 18706008 18706532 2L - 18706325 18706360 3'utr Faf FlyBase G11452.1 TAGGTTGATTCTCTGATCTGCCCAACACCATCAACC 6 18706344 0.727158865 3 6 36 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2L:18706325-18706360 6 Faf FBtr0343115 18706008 18706532 TGATCT 6mer3-8 dme-bantam-3p 2L - 18706322 18706359 3'utr Faf FlyBase G8799.1 AGGTTGATTCTCTGATCTGCCCAACACCATCAACCAAC 5 18706342 0.964017397 2 5 27 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 2L:18706322-18706359 6 5.5 291 FBgn0025608 1253.34 66.89333333 102.5866667 0.004388275 0.08222045 0.053613205 -3 -5 -4 0.15 dme-miR-980-3p 6mer3-8 GGCAGC 2L 18711278 18711283 - 2L_18711278_18711283_- 0.999627481 0.999998767 0.999813124 0.000262549 Irk3 FBtr0081125|FBtr0343114 18711069|18711069 18711336|18711336 2L - 18711248 18711297 3'utr Irk3 FlyBase G11464.1 CGCATTACACTTTTGGCAGCACTATATTAATAACGAATTCAAAAACATTT 8 18711284 0.988187978 3 7 62 1 0.954242509 0 0.125 0.222222222 8 0 0 9 2L:18711248-18711297 6 Irk3 FBtr0081125|FBtr0343114 18711069|18711069 18711336|18711336 GGCAGC 6mer3-8 dme-miR-980-3p 2L - 18711262 18711297 3'utr Irk3 FlyBase G8807.1 CGCATTACACTTTTGGCAGCACTATATTAATAACGA 5 18711284 0.950480016 2 4 32 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2L:18711262-18711297 6 5 292 FBgn0032706 11.00333333 0.756666667 1.173333333 0.454407755 6.607929515 4.261363636 1 1 1 0.15 dme-miR-1008-3p 6mer3-8 AGCTGT 2L 18833929 18833934 - 2L_18833929_18833934_- 0.981118079 0.928460229 0.954789154 0.037234758 CG10600 FBtr0273228|FBtr0081120|FBtr0331194 18833708|18833708|18833708 18834497|18834497|18834497 2L - 18833915 18833962 3'utr CG10600 FlyBase G11474.1 AAGTTTTTTAATGCAGGCTGGTACACTGAGCTGTTATAGTGTGTATTT 5 18833936 0.9850188 3 4 39 0.8 0.602059991 0.2 0 0 5 1 0 4 2L:18833915-18833962 6 CG10600 FBtr0331194|FBtr0081120|FBtr0273228 18833708|18833708|18833708 18834497|18834497|18834497 AGCTGT 6mer3-8 dme-miR-1008-3p 2L - 18833916 18833962 3'utr CG10600 FlyBase G8816.1 AAGTTTTTTAATGCAGGCTGGTACACTGAGCTGTTATAGTGTGTATT 9 18833937 0.805101533 6 9 66 1 1.041392685 0.090909091 0.111111111 0.272727273 9 0 0 11 2L:18833916-18833962 6 5 293 FBgn0032717 1261.5 29.36666667 45.24666667 0.003963535 0.170261067 0.110505378 2 3 2.5 0.15 dme-miR-283-5p 6mer2-7 GATATT 2L 18834198 18834203 - 2L_18834198_18834203_- 0.999999157 0.999998459 0.999998808 4.95E-07 CG10600 FBtr0273228|FBtr0081120|FBtr0331194 18833708|18833708|18833708 18834497|18834497|18834497 2L - 18834178 18834256 3'utr CG10600 FlyBase G11476.1 GCAGGAGTCGCTATTATACCATTTATTTTGAAAATTGTTATTCCTTGTTCTGCGATATTGAGCAGCCACAGTTTTGTGC 23 18834208 0.990206449 8 22 221 0.962962963 1.414973348 0.296296296 0.173913043 0.296296296 23 1 0 26 2L:18834178-18834256 6 CG10600 FBtr0331194|FBtr0081120|FBtr0273228 18833708|18833708|18833708 18834497|18834497|18834497 GATATT 6mer2-7 dme-miR-283-5p 2L - 18834183 18834226 3'utr CG10600 FlyBase G8818.1 AAAATTGTTATTCCTTGTTCTGCGATATTGAGCAGCCACAGTTT 18 18834208 0.991854551 4 14 163 0.878787879 0.860338007 0.090909091 0.555555556 0.757575758 18 1 3 29 2L:18834183-18834226 6 17.5 294 FBgn0032717 1261.5 29.36666667 45.24666667 0.013872374 0.595913734 0.386768823 5 5 5 0.15 dme-bantam-3p 7mer-A1 GATCTCA 2L 18834354 18834360 - 2L_18834354_18834360_- 0.8232918 0.819524548 0.821408174 0.002663883 CG10600 FBtr0273228|FBtr0081120|FBtr0331194 18833708|18833708|18833708 18834497|18834497|18834497 2L - 18834334 18834394 3'utr CG10600 FlyBase G11477.1 AACGGATTTCGAGTAGCTGAATCCTTTAAAGGAAGATCTCAACTCTGAAAGGGATTTCAAT 25 18834371 0.670145898 10 25 145 1 1.477121255 0.066666667 0.16 0.3 25 0 0 30 2L:18834334-18834394 7 CG10600 FBtr0331194|FBtr0081120|FBtr0273228 18833708|18833708|18833708 18834497|18834497|18834497 GATCTCA 7mer-A1 dme-bantam-3p 2L - 18834309 18834395 3'utr CG10600 FlyBase G8819.1 AAACGGATTTCGAGTAGCTGAATCCTTTAAAGGAAGATCTCAACTCTGAAAGGGATTTCAATACTTACTGAAGGTTGGCCATACAAT 21 18834373 0.930348484 9 18 128 0.766666667 0.662757832 0.1 0.333333333 0.533333333 21 3 4 23 2L:18834309-18834395 7 12.5 295 FBgn0032717 1261.5 29.36666667 45.24666667 0.009908839 0.425652667 0.276263445 11 13 12 0.15 dme-miR-282-5p 7mer-m8 AGAGGCT 2L 18834458 18834464 - 2L_18834458_18834464_- 0.629910429 0.625429717 0.627670073 0.003168333 CG10600 FBtr0273228|FBtr0081120|FBtr0331194 18833708|18833708|18833708 18834497|18834497|18834497 2L - 18834425 18834570 stop_codon CG10600 FlyBase G11478.1 CTCATCATCGACATCCTCGGCAACAACGAATAGTTCGCTCTCCTCTTACGCCGGTTCCAACAATAGCTTTTGAAACTGGGAAAAGAAATGGACGGAAAGCGAGAGTAGAGGCTCCTATTTGGACTTTATGTGAAACTATATATTTT 271 18834465 0.97438594 18 269 1661 0.993865031 2.51054501 0.457055215 0.162361624 0.303680982 271 2 0 324 2L:18834425-18834570 7 CG10600 FBtr0331194|FBtr0081120|FBtr0273228 18833708|18833708|18833708 18834497|18834497|18834497 AGAGGCT 7mer-m8 dme-miR-282-5p 2L - 18834419 18834523 stop_codon CG10600 FlyBase G8820.1 ACGCCGGTTCCAACAATAGCTTTTGAAACTGGGAAAAGAAATGGACGGAAAGCGAGAGTAGAGGCTCCTATTTGGACTTTATGTGAAACTATATATTTTGTAAAT 195 18834451 0.912020358 16 187 1261 0.964788732 1.960629308 0.461267606 0.317948718 0.531690141 195 8 2 274 2L:18834419-18834523 7 206 296 FBgn0032717 1261.5 29.36666667 45.24666667 0.163297662 7.014755959 4.552821571 1 -13 -6 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 2L 18957924 18957930 - 2L_18957924_18957930_- 0.437954438 0.37346022 0.405707329 0.045604286 Nak FBtr0340325|FBtr0081187 18957730|18957898 18958299|18958299 2L - 18957907 18957952 3'utr Nak FlyBase G11531.1 ATTATATATTTATACAAAACTATGTGATTATACACCCACACCCAAT 28 18957923 0.971102071 3 28 172 1 1.556302501 0 0.285714286 0.444444444 28 0 0 36 2L:18957907-18957952 7 Nak FBtr0081187|FBtr0340325 18957898|18957730 18958299|18958299 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 18957907 18957945 3'utr Nak FlyBase G8855.1 ATTTATACAAAACTATGTGATTATACACCCACACCCAAT 21 18957923 0.972774494 4 20 122 0.966666667 1.161368002 0 0.285714286 0.5 21 0 1 29 2L:18957907-18957945 7 24.5 297 FBgn0015772 651.1433333 17.45333333 26.77666667 0.037626124 1.403743316 0.914975725 -7 -7 -7 0.15 dme-miR-92b-3p 6mer3-8 GTGCAA 2L 18958064 18958069 - 2L_18958064_18958069_- 0.99690445 0.998282951 0.9975937 0.000974817 Nak FBtr0340325|FBtr0081187 18957730|18957898 18958299|18958299 2L - 18957985 18958090 3'utr Nak FlyBase G11532.1 AATACCTATAACTGTTATTTAGTGCAAAAATTTAAACTAGTTTTAGAAGCGAAACATGTTTTAGAATTTATACAGTGCGTAAGTTTACCAAAGTTACATTTATTTT 21 18958072 0.985143957 8 20 171 0.96 1.380211242 0.04 0.19047619 0.32 21 1 0 24 2L:18957985-18958090 6 Nak FBtr0081187|FBtr0340325 18957898|18957730 18958299|18958299 GTGCAA 6mer3-8 dme-miR-92b-3p 2L - 18958058 18958096 3'utr Nak FlyBase G8856.1 AAGAACAATACCTATAACTGTTATTTAGTGCAAAAATTT 8 18958072 0.698491242 4 8 76 1 1.176091259 0 0.375 0.666666667 8 0 0 15 2L:18958058-18958096 6 11 298 FBgn0015772 651.1433333 17.45333333 26.77666667 0.016893362 0.630252101 0.410805428 3 3 3 0.15 dme-miR-14-3p 7mer-A1 AGACTGA 2L 18958258 18958264 - 2L_18958258_18958264_- 0.809464201 0.800482656 0.804973429 0.00635088 Nak FBtr0340325|FBtr0081187 18957730|18957898 18958299|18958299 2L - 18958245 18958292 3'utr Nak FlyBase G11533.2 AGTGGGGCGAGACCATCAAGGAGACCTGAGACTGAGTGTTTCAAATTA 165 18958266 0.966311253 6 159 540 0.961904762 2.305351369 0.138095238 0.224242424 0.39047619 165 8 0 202 2L:18958245-18958292 7 Nak FBtr0081187|FBtr0340325 18957898|18957730 18958299|18958299 AGACTGA 7mer-A1 dme-miR-14-3p 2L - 18958246 18958292 3'utr Nak FlyBase G8858.1 AGTGGGGCGAGACCATCAAGGAGACCTGAGACTGAGTGTTTCAAATT 98 18958266 0.958550746 4 91 307 0.942857143 1.643452676 0.078571429 0.326530612 0.528571429 98 6 2 132 2L:18958246-18958292 7 129 299 FBgn0015772 651.1433333 17.45333333 26.77666667 0.198113063 7.391138273 4.817627287 2 2 2 0.15 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 18961469 18961476 - 2L_18961469_18961476_- 0.624760439 0.625072387 0.624916413 0.000220617 Nak FBtr0340326|FBtr0081189 18960925|18961114 18962750|18962873 2L - 18961463 18961492 3'utr Nak FlyBase G11544.1 AATTGAAATGTTCAATTAGCTTTAATTACT 12 18961477 0.785599795 2 12 109 1 1.204119983 0.25 0.166666667 0.375 12 0 0 16 2L:18961463-18961492 8 Nak FBtr0081189|FBtr0340326 18961114|18960925 18962873|18962750 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 18961453 18961525 3'utr Nak FlyBase G8866.1 TGATCACTTTTGTTCTCTACACACAGACACACCAATTGAAATGTTCAATTAGCTTTAATTACTACTCTTGTTA 10 18961477 0.985264676 5 9 84 0.9375 1.176091259 0.0625 0.3 0.5625 10 1 0 15 2L:18961453-18961525 8 8.5 300 FBgn0015772 651.1433333 17.45333333 26.77666667 0.013053961 0.487012987 0.317440558 1 1 1 0.15 dme-miR-8-3p 7mer-m8 CAGTATT 2L 18977655 18977661 - 2L_18977655_18977661_- 0.661307904 0.661245428 0.661276666 4.42E-05 Swip-1 FBtr0340322 18977517 18978354 2L - 18977634 18977685 3'utr Swip-1 FlyBase G11555.2 AAAGTAAAACAATAAGTTTCGATTCAGTATTTCACGTTTAAAGTTAGCGATT 72 18977663 0.780386058 7 64 605 0.875 1.886490725 0.056818182 0.208333333 0.352272727 72 11 0 77 2L:18977634-18977685 7 Swip-1 FBtr0340322 18977517 18978354 CAGTATT 7mer-m8 dme-miR-8-3p 2L - 18977594 18977690 3'utr Swip-1 FlyBase G8872.1 AGCCTAAAGTAAAACAATAAGTTTCGATTCAGTATTTCACGTTTAAAGTTAGCGATTTAAGCAATACTAATGCGTTAAATACGAATACACAAGAAAA 69 18977663 0.98739128 9 65 564 0.944954128 1.53571597 0.082568807 0.449275362 0.651376147 69 4 2 103 2L:18977594-18977690 7 66 301 FBgn0032731 3016.77 219.0933333 334.6766667 0.021877704 0.30124148 0.197205263 2 2 2 0.15 dme-miR-965-3p 7mer-m8 TACGCTT 2L 18978265 18978271 - 2L_18978265_18978271_- 0.469240942 0.575902993 0.522571967 0.075421494 Swip-1 FBtr0340322 18977517 18978354 2L - 18978156 18978317 3'utr Swip-1 FlyBase G11557.2 CTGGCGTAGGTTAATCGAATGTGGAACTAATCCCGGGAGAAGAGGATACGCTTCGTACAAGCATTTTTCAAGCATCACATACTCTAATTATATTCATACTTATCGCCCCATACATATAAAAACTCGATTTGCTGGCAAAAACATCTTGGGAATTGAATGTTA 752 18978287 0.85864425 31 706 2827 0.953810624 2.01389006 0.282909931 0.123670213 0.239030023 752 33 7 826 2L:18978156-18978317 7 Swip-1 FBtr0340322 18977517 18978354 TACGCTT 7mer-m8 dme-miR-965-3p 2L - 18978140 18978356 stop_codon Swip-1 FlyBase G8874.1 AGAGGACTTAGGTTCGCCCTTAGTCTAGCGAGTAATTATCTGGCGTAGGTTAATCGAATGTGGAACTAATCCCGGGAGAAGAGGATACGCTTCGTACAAGCATTTTTCAAGCATCACATACTCTAATTATATTCATACTTATCGCCCCATACATATAAAAACTCGATTTGCTGGCAAAAACATCTTGGGAATTGAATGTTATCTTTGACTAATGTTT 420 18978287 0.86937726 31 400 1625 0.957841484 2.055378331 0.291736931 0.302380952 0.505902192 420 21 4 568 2L:18978140-18978356 7 301 302 FBgn0032731 3016.77 219.0933333 334.6766667 0.099775588 1.37384372 0.899375517 16 16 16 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 19008169 19008176 + 2L_19008169_19008176_+ 0.499933183 0.498487589 0.499210386 0.001022194 CG31793 FBtr0340318|FBtr0081138 19008052|19008052 19008234|19008234 2L + 19008129 19008187 3'utr CG31793 FlyBase G5156.1 TCGTGGTCATAGATTCAGTTTTATAGAATACAAAACGTTTGTACTTAAGGGAGTAAAGC 19 19008168 0.797798843 3 19 146 1 1.342422681 0.045454545 0.157894737 0.272727273 19 0 0 22 2L:19008129-19008187 8 CG31793 FBtr0081138|FBtr0340318 19008052|19008052 19008234|19008234 GTACTTAA 8mer-A1 dme-miR-252-5p 2L + 19008131 19008187 3'utr CG31793 FlyBase G4010.1 GTGGTCATAGATTCAGTTTTATAGAATACAAAACGTTTGTACTTAAGGGAGTAAAGC 11 19008142 0.976547565 3 11 84 1 1.146128036 0.142857143 0.272727273 0.428571429 11 0 0 14 2L:19008131-19008187 8 8 303 FBgn0051793 240.37 6.446666667 9.863333333 0.033282024 1.240951396 0.811084826 1 27 14 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2L 19041185 19041191 + 2L_19041185_19041191_+ 0.620575284 0.63206882 0.626322052 0.008127132 mib2 FBtr0336840|FBtr0336841|FBtr0081142 19041121|19041121|19041121 19041473|19041541|19041541 2L + 19041148 19041201 3'utr mib2 FlyBase G5180.1 AGCAAAGGCGGCAGGATCAGCAGCAATTCAAACAGCAACCAAAGTGGCTTGTAT 9 19041194 0.924647342 3 9 30 1 1 0 0.111111111 0.2 9 0 0 10 2L:19041148-19041201 7 mib2 FBtr0336840|FBtr0336841|FBtr0081142 19041121|19041121|19041121 19041473|19041541|19041541 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L + 19041176 19041212 3'utr mib2 FlyBase G4025.1 CAAACAGCAACCAAAGTGGCTTGTATATATACATACA 8 19041194 0.942204511 2 8 34 1 1 0 0.25 0.4 8 0 0 10 2L:19041176-19041212 7 8 304 FBgn0086442 1398.326667 43.78666667 67.22333333 0.005721124 0.182704019 0.119006297 -9 -9 -9 0.15 dme-miR-305-3p 6mer3-8 ATGTGC 2L 19041244 19041249 + 2L_19041244_19041249_+ 0.9954977 0.992983227 0.994240464 0.00177802 mib2 FBtr0336840|FBtr0336841|FBtr0081142 19041121|19041121|19041121 19041473|19041541|19041541 2L + 19041211 19041257 3'utr mib2 FlyBase G5181.1 CACAAAACAAACACACACTCACATTGCCGTGTCATGTGCAAATCGAA 6 19041235 0.959420325 4 6 30 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 2L:19041211-19041257 6 mib2 FBtr0336840|FBtr0336841|FBtr0081142 19041121|19041121|19041121 19041473|19041541|19041541 ATGTGC 6mer3-8 dme-miR-305-3p 2L + 19041227 19041269 3'utr mib2 FlyBase G4026.1 ACTCACATTGCCGTGTCATGTGCAAATCGAAATTATTATTTAT 6 19041235 0.784715718 4 5 37 0.714285714 0.698970004 0.285714286 0.166666667 0.285714286 6 2 0 5 2L:19041227-19041269 6 4 305 FBgn0086442 1398.326667 43.78666667 67.22333333 0.002860562 0.09135201 0.059503149 9 9 9 0.15 dme-miR-932-5p 7mer-A1 GAATTGA 2L 19069567 19069573 + 2L_19069567_19069573_+ 0.823341916 0.823346296 0.823344106 3.11E-06 CG17343 FBtr0081151 19065246 19069673 2L + 19069535 19069593 3'utr CG17343 FlyBase G5242.1 TTGTGCTTTTTCGCGCACTGCAAGCGAAATTAGAATTGATCGTCGTAGTTCACTAATAT 37 19069570 0.7690261 7 33 303 0.886363636 1.290034611 0.068181818 0.162162162 0.295454545 37 4 1 39 2L:19069535-19069593 7 CG17343 FBtr0081151 19065246 19069673 GAATTGA 7mer-A1 dme-miR-932-5p 2L + 19069534 19069597 3'utr CG17343 FlyBase G4075.1 CTTGTGCTTTTTCGCGCACTGCAAGCGAAATTAGAATTGATCGTCGTAGTTCACTAATATATTT 30 19069570 0.730505974 7 29 235 0.96969697 1.505149978 0.060606061 0.1 0.181818182 30 1 0 32 2L:19069534-19069597 7 29.5 306 FBgn0032751 35 7.813333333 11.57333333 0.842857143 3.77559727 2.548963134 -3 -3 -3 0.15 dme-miR-8-3p 6mer2-7 AGTATT 2L 19172669 19172674 + 2L_19172669_19172674_+ 0.999891582 0.999998603 0.999945092 7.57E-05 brat FBtr0081160 19171258 19179758 2L + 19172635 19172683 3'utr brat FlyBase G5280.1 GTATCTTGAGGATGTGTGTGCATAGATCTAATTGAGTATTTAAAAGTAA 12 19172666 0.798441665 7 12 98 1 1.255272505 0.111111111 0.25 0.5 12 0 0 18 2L:19172635-19172683 6 brat FBtr0081160 19171258 19179758 AGTATT 6mer2-7 dme-miR-8-3p 2L + 19172630 19172684 3'utr brat FlyBase G4109.1 TCAAAGTATCTTGAGGATGTGTGTGCATAGATCTAATTGAGTATTTAAAAGTAAC 12 19172652 0.670140593 6 12 100 1 1.397940009 0.36 0.666666667 0.84 12 0 0 25 2L:19172630-19172684 6 4.5 307 FBgn0010300 4742.333333 86.64666667 133.0666667 0.0009489 0.051935062 0.033817635 3 17 10 0.15 dme-miR-304-5p 8mer-A1 TGAGATTA 2L 19173529 19173536 + 2L_19173529_19173536_+ 0.575154709 0.434519302 0.504837006 0.099444245 brat FBtr0081160 19171258 19179758 2L + 19173494 19173548 3'utr brat FlyBase G5288.1 GATAATTACCTATGTTTTGTGTGTATCTACTTAAGTGAGATTATTAAATATACGA 23 19173528 0.969755715 8 21 212 0.923076923 1.380211242 0.038461538 0.086956522 0.192307692 23 2 0 24 2L:19173494-19173548 8 brat FBtr0081160 19171258 19179758 TGAGATTA 8mer-A1 dme-miR-304-5p 2L + 19173507 19173549 3'utr brat FlyBase G4117.1 GTTTTGTGTGTATCTACTTAAGTGAGATTATTAAATATACGAA 22 19173528 0.748183524 6 18 181 0.848484848 1.447158031 0.03030303 0.363636364 0.575757576 22 5 0 28 2L:19173507-19173549 8 20.5 308 FBgn0010300 4742.333333 86.64666667 133.0666667 0.004322767 0.23659306 0.154058116 1 1 1 0.15 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 2L 19174189 19174194 + 2L_19174189_19174194_+ 0.562054442 0.954839705 0.758447074 0.277741149 brat FBtr0081160|FBtr0081160 19171258|19171258 19179758|19179758 2L + 19174136 19174208 3'utr brat FlyBase G5293.1 CAACCCAACAACAAATGCCACAAAAACCAACTGAAAAACCATTAAAGATTTTATACTTATTCTGATAAAAAGA 10 19174195 0.999834673 8 10 53 1 1.079181246 0.166666667 0.2 0.333333333 10 0 0 12 2L:19174136-19174208 6 brat FBtr0081160|FBtr0081160 19171258|19171258 19179758|19179758 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 2L + 19174140 19174199 3'utr brat FlyBase G4121.1 CCAACAACAAATGCCACAAAAACCAACTGAAAAACCATTAAAGATTTTATACTTATTCTG 8 19174177 0.962709418 6 8 40 1 1 0.2 0.25 0.4 8 0 0 10 2L:19174140-19174199 6 4.5 309 FBgn0010300 4742.333333 86.64666667 133.0666667 0.0009489 0.051935062 0.033817635 -6 12 3 0.15 dme-miR-14-3p 6mer2-7 AGACTG 2L 19174483 19174488 + 2L_19174483_19174488_+ 0.80427479 0.661089792 0.732682291 0.101247084 brat FBtr0081160 19171258 19179758 2L + 19174464 19174502 3'utr brat FlyBase G5294.1 GATGAATTGAGAATCTAATAGACTGTGCAACCACAAAAA 46 19174482 0.891133762 5 44 235 0.96 1.380211242 0 0.086956522 0.16 46 1 1 48 2L:19174464-19174502 6 brat FBtr0081160 19171258 19179758 AGACTG 6mer2-7 dme-miR-14-3p 2L + 19174459 19174503 3'utr brat FlyBase G4122.1 AAATTGATGAATTGAGAATCTAATAGACTGTGCAACCACAAAAAT 40 19174489 0.960105864 5 35 205 0.876923077 1.056904851 0 0.45 0.661538462 40 4 4 57 2L:19174459-19174503 6 42.5 310 FBgn0010300 4742.333333 86.64666667 133.0666667 0.008961833 0.490497807 0.319388778 1 -6 -2.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 19177915 19177922 + 2L_19177915_19177922_+ 0.631136644 0.631095923 0.631116284 2.88E-05 brat FBtr0336627|FBtr0081160 19177522|19171258 19179758|19179758 2L + 19177881 19177935 3'utr brat FlyBase G5295.1 ATATAGTGCAACTAAGCCGATCATGGTATCATCATCTAGTCATCATGCATACATA 17 19177912 0.980899443 7 17 122 1 1.380211242 0.041666667 0.352941176 0.541666667 17 0 0 24 2L:19177881-19177935 8 brat FBtr0336627|FBtr0081160 19177522|19171258 19179758|19179758 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L + 19177876 19177930 3'utr brat FlyBase G4123.1 ACGCTATATAGTGCAACTAAGCCGATCATGGTATCATCATCTAGTCATCATGCAT 8 19177915 0.981039364 3 8 58 1 1.176091259 0 0.625 0.8 8 0 0 15 2L:19177876-19177930 8 11.5 311 FBgn0010300 4742.333333 86.64666667 133.0666667 0.002424967 0.132722936 0.086422846 3 0 1.5 0.15 dme-miR-92b-3p 7mer-m8 GTGCAAT 2L 19179882 19179888 - 2L_19179882_19179888_- 0.625342925 0.644923341 0.635133133 0.013845434 CG17568 FBtr0081233 19179747 19179946 2L - 19179873 19179901 3'utr CG17568 FlyBase G11636.1 ATCAGATAGGAATGTGCAATCTCAAATTT 13 19179888 0.799746802 2 11 70 0.933333333 0.84509804 0.133333333 0.153846154 0.266666667 13 0 1 14 2L:19179873-19179901 7 CG17568 FBtr0081233 19179747 19179946 GTGCAAT 7mer-m8 dme-miR-92b-3p 2L - 19179872 19179905 3'utr CG17568 FlyBase G8935.1 TGGCATCAGATAGGAATGTGCAATCTCAAATTTT 8 19179888 0.79263559 3 7 44 1 1.113943352 0.076923077 0.375 0.615384615 8 0 0 13 2L:19179872-19179905 7 9.5 312 FBgn0032763 137.99 9.22 14.17666667 0.068845569 1.030368764 0.670115213 0 0 0 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2L 19189662 19189668 + 2L_19189662_19189668_+ 0.821943558 0.745355626 0.783649592 0.054155894 pigeon FBtr0302561|FBtr0081194 19189305|19189584 19189938|19189938 2L + 19189596 19189861 3'utr pigeon FlyBase G5309.1 AAGAGTAACTAATGAAGTATTGTGTCAAATTATCAAGTACTTAGCCAAGGCCAGTTTGCAAATATTCCAAAGATTTGATTTGTCAAATGTATTAGTTAAGATTCTTCTCGTGCAGCTTTGATTTTTGTTAGGGTTCTTCTGTGTGCTTTTAGTATTAATTTTCTGTTCCTATTATTTGTGTAACGACTGATACACATTCCAAGTCTGTAATTATAAATTATTTATGTTGTTAATTGATGTACCTAAAATCATGTACGTATTTATAT 326 19189660 0.837831772 58 307 3172 0.950904393 1.611605309 0.124031008 0.165644172 0.297157623 326 11 8 368 2L:19189596-19189861 7 pigeon FBtr0302561|FBtr0081194 19189305|19189584 19189938|19189938 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2L + 19189639 19189675 3'utr pigeon FlyBase G4130.2 GCCAAGGCCAGTTTGCAAATATTCCAAAGATTTGATT 44 19189660 0.847628176 4 43 299 1 1.812913357 0.338461538 0.325581395 0.553846154 43 0 0 65 2L:19189639-19189675 7 73.5 313 FBgn0010309 154.9266667 5.81 8.776666667 0.474418004 12.65060241 8.374477782 2 2 2 0.15 dme-miR-283-5p 8mer-m1 TGATATTT 2L 19338842 19338849 - 2L_19338842_19338849_- 0.555593832 0.549899143 0.552746488 0.004026761 dnt FBtr0336820|FBtr0081224 19338667|19338676 19339164|19339164 2L - 19338827 19338881 3'utr dnt FlyBase G11641.1 CTAGCTAAAACAAAGGCCGAAATCAAATATAGTGATATTTATAAATAGAGATAGC 26 19338853 0.824696096 8 22 194 0.866666667 1.414973348 0.133333333 0.153846154 0.266666667 26 4 0 26 2L:19338827-19338881 8 dnt FBtr0336820|FBtr0081224 19338667|19338676 19339164|19339164 TGATATTT 8mer-m1 dme-miR-283-5p 2L - 19338831 19338869 3'utr dnt FlyBase G8941.1 AAGGCCGAAATCAAATATAGTGATATTTATAAATAGAGA 11 19338853 0.850910768 3 9 80 0.882352941 0.698970004 0.235294118 0.454545455 0.647058824 11 0 2 15 2L:19338831-19338869 8 16.5 314 FBgn0024245 411 18.84333333 28.87333333 0.040145985 0.875641252 0.571461556 4 4 4 0.15 dme-miR-318-3p 8mer-A1 CCCAGTGA 2L 19390517 19390524 - 2L_19390517_19390524_- 0.675093885 0.677687798 0.676390841 0.001834164 CG17544 FBtr0081216|FBtr0300822|FBtr0081218|FBtr0081217 19390368|19390368|19390368|19390368 19390668|19390668|19390668|19390668 2L - 19390510 19390542 3'utr CG17544 FlyBase G11650.1 ATGGCCAACTACATTGATCCCAGTGAAAGGTTT 12 19390529 0.694743677 2 12 61 1 1.113943352 0.153846154 0.083333333 0.153846154 12 0 0 13 2L:19390510-19390542 8 CG17544 FBtr0081217|FBtr0081218|FBtr0300822|FBtr0081216 19390368|19390368|19390368|19390368 19390668|19390668|19390668|19390668 CCCAGTGA 8mer-A1 dme-miR-318-3p 2L - 19390507 19390541 3'utr CG17544 FlyBase G8947.1 TGGCCAACTACATTGATCCCAGTGAAAGGTTTTTT 8 19390528 0.679659964 2 7 48 0.9 0.653212514 0 0.125 0.3 8 0 1 9 2L:19390507-19390541 8 10 315 FBgn0032775 1454.426667 69.89666667 107.4566667 0.006875562 0.143068339 0.093060769 5 4 4.5 0.15 dme-miR-31a-5p 8mer-A1 TCTTGCCA 2L 19429101 19429108 + 2L_19429101_19429108_+ 0.630946729 0.629946234 0.630446482 0.00070746 CG16771 FBtr0334164|FBtr0302874|FBtr0302938|FBtr0334165|FBtr0081204 19429037|19429037|19429037|19429037|19429037 19429224|19429224|19429224|19429224|19429224 2L + 19429057 19429161 3'utr CG16771 FlyBase G5315.1 AGCCAACAAAACACTTTGATATATGTAGTTATAATGAAAACTGTTCTTGCCAAGCTTACAAATTAGATATAAGTCAAAGATTGGGTCACCGAAATAGGACATGAG 42 19429100 0.974806979 13 40 272 0.97826087 1.653212514 0.260869565 0.095238095 0.173913043 42 1 0 45 2L:19429057-19429161 8 CG16771 FBtr0334165|FBtr0302938|FBtr0302874|FBtr0334164|FBtr0081204 19429037|19429037|19429037|19429037|19429037 19429224|19429224|19429224|19429224|19429224 TCTTGCCA 8mer-A1 dme-miR-31a-5p 2L + 19429056 19429114 3'utr CG16771 FlyBase G4133.1 TAGCCAACAAAACACTTTGATATATGTAGTTATAATGAAAACTGTTCTTGCCAAGCTTA 25 19429100 0.98478031 3 19 169 0.794117647 0.73239376 0.235294118 0.28 0.470588235 25 3 4 27 2L:19429056-19429114 8 23 316 FBgn0032779 937.25 47.39333333 72.85666667 0.024539877 0.485300324 0.315688338 1 1 1 0.15 dme-miR-79-3p 6mer3-8 TAGCTT 2L 1943248 1943253 + 2L_1943248_1943253_+ 0.879066065 0.982167537 0.930616801 0.072903699 CG7337 FBtr0309828|FBtr0333006|FBtr0110882|FBtr0113011|FBtr0113012|FBtr0077811|FBtr0110883|FBtr0333007 1942964|1942964|1942964|1942964|1942964|1942964|1942964|1942964 1943818|1943818|1943939|1944289|1943461|1943818|1943947|1943461 2L + 1943220 1943357 3'utr CG7337 FlyBase G1109.1 AATAATTTATATGTCAACCGATTGCGTTTAGCTTGAATTAAATTCTGTAAATGTTAAGTTTAATAAGCTTAATAGATTTATGTACGTGTTAAGTGTTATTTGAGTTTAAGGCGGAATGATACGGAATGACCGGACCGG 113 1943241 0.986544894 11 113 960 1 2.120573931 0.234848485 0.159292035 0.28030303 113 0 0 132 2L:1943220-1943357 6 CG7337 FBtr0110883|FBtr0333007|FBtr0113012|FBtr0077811|FBtr0110882|FBtr0113011|FBtr0309828|FBtr0333006 1942964|1942964|1942964|1942964|1942964|1942964|1942964|1942964 1943947|1943461|1943461|1943818|1943939|1944289|1943818|1943818 TAGCTT 6mer3-8 dme-miR-79-3p 2L + 1943219 1943302 3'utr CG7337 FlyBase G877.1 CAATAATTTATATGTCAACCGATTGCGTTTAGCTTGAATTAAATTCTGTAAATGTTAAGTTTAATAAGCTTAATAGATTTATGT 62 1943241 0.844787228 6 62 532 1 2.025305865 0.216981132 0.5 0.70754717 62 0 0 106 2L:1943219-1943302 6 75.5 317 FBgn0031374 1209.94 21.90666667 33.73666667 0.062399788 3.44643944 2.237921154 7 7 7 0.15 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 19435335 19435342 + 2L_19435335_19435342_+ 0.624567406 0.62506628 0.624816843 0.000352776 Rab9 FBtr0081206 19435305 19435841 2L + 19435278 19435396 stop_codon Rab9 FlyBase G5327.1 AGGCGCCAGCCACCAATTATCGGCTATGAGCAGACAGACAGGAGCTGTCAGGAAACTTACGCTTAATTTAACCACTCACCCCGCCGGGTTGACCTTCAGATTCAATGCATTCCAGTCCG 230 19435334 0.980366963 11 226 1628 0.985185185 1.947760382 0.022222222 0.12173913 0.251851852 230 2 2 266 2L:19435278-19435396 8 Rab9 FBtr0081206 19435305 19435841 TACGCTTA 8mer-A1 dme-miR-965-3p 2L + 19435284 19435408 stop_codon Rab9 FlyBase G4142.1 CAGCCACCAATTATCGGCTATGAGCAGACAGACAGGAGCTGTCAGGAAACTTACGCTTAATTTAACCACTCACCCCGCCGGGTTGACCTTCAGATTCAATGCATTCCAGTCCGCGGAGGGGCAGG 104 19435334 0.979911182 11 100 697 0.966216216 2.155336037 0.060810811 0.307692308 0.513513514 104 5 0 143 2L:19435284-19435408 8 158.5 318 FBgn0032782 68.33333333 5.243333333 8.043333333 2.319512195 30.22886205 19.70576046 1 1 1 0.15 dme-bantam-3p 6mer2-7 GATCTC 2L 19435546 19435551 + 2L_19435546_19435551_+ 0.999753627 0.999978739 0.999866183 0.00015917 Rab9 FBtr0081206 19435305 19435841 2L + 19435521 19435580 3'utr Rab9 FlyBase G5329.1 GAGCTAGCTTCTATGTCAAGAATAGGATCTCCATTTTTACTTGCTATGCTTTAATATTAT 26 19435555 0.692278769 9 24 201 0.894736842 1.531478917 0.078947368 0.346153846 0.552631579 26 4 0 34 2L:19435521-19435580 6 Rab9 FBtr0081206 19435305 19435841 GATCTC 6mer2-7 dme-bantam-3p 2L + 19435436 19435561 3'utr Rab9 FlyBase G4143.1 ACCCAATGTTGATGGCTGTAGAGAGTGGATTGCCTCGTTGTGGTTGATATTCTAAGGGAACTATGCTTCACAGCGAGCTAACTATGAGCTAGCTTCTATGTCAAGAATAGGATCTCCATTTTTACT 33 19435554 0.777402925 11 30 217 0.886792453 1.672097858 0.264150943 0.393939394 0.622641509 33 6 0 47 2L:19435436-19435561 6 16 319 FBgn0032782 68.33333333 5.243333333 8.043333333 0.234146341 3.051493961 1.989225031 -9 -8 -8.5 0.15 dme-bantam-3p 6mer3-8 TGATCT 2L 19443187 19443192 - 2L_19443187_19443192_- 0.756146828 0.509181094 0.632663961 0.174631121 Hs2st FBtr0081288 19442831 19443303 2L - 19443105 19443229 3'utr Hs2st FlyBase G11682.1 TTGTATTGTAAATACGTAATTCTCCTTCGCATAGATTTGATCTGTACTTAAGAGTAACTCATCCGTACACTTAAGCGCTACCTAAGACTTTAGCATTGAATATCGTTGACATATTACTAACCCAA 139 19443187 0.717122147 23 133 1097 0.975 1.892094603 0.225 0.122302158 0.2375 139 3 1 156 2L:19443105-19443229 6 Hs2st FBtr0081288 19442831 19443303 TGATCT 6mer3-8 dme-bantam-3p 2L - 19443129 19443216 3'utr Hs2st FlyBase G8968.1 ACGTAATTCTCCTTCGCATAGATTTGATCTGTACTTAAGAGTAACTCATCCGTACACTTAAGCGCTACCTAAGACTTTAGCATTGAAT 87 19443187 0.785361728 11 83 710 0.961538462 2.096910013 0.176923077 0.379310345 0.584615385 87 5 0 125 2L:19443129-19443216 6 81 320 FBgn0024230 209.3333333 15.55 23.84 0.386942675 5.209003215 3.397651007 -5 -5 -5 0.15 dme-miR-276a-3p 6mer3-8 AGTTCC 2L 19497418 19497423 + 2L_19497418_19497423_+ 0.999999854 0.991984215 0.995992035 0.005667956 swm FBtr0081245|FBtr0331326|FBtr0081244|FBtr0331325 19497383|19497383|19497383|19497383 19497978|19497835|19497835|19497978 2L + 19497382 19497484 stop_codon swm FlyBase G5373.1 TGATCCATCGCCCTCCGCTGTTGAGGCGGCCGGGAAAGTTCCGTGGGGCTCACAAGTGTTAGGAAACCCTTAACATGTATTTGTTGTTATTCTATATCTAACT 27 19497424 0.966080544 12 27 167 1 1.491361694 0.096774194 0.074074074 0.193548387 27 0 0 31 2L:19497382-19497484 6 swm FBtr0081244|FBtr0331325|FBtr0081245|FBtr0331326 19497383|19497383|19497383|19497383 19497835|19497978|19497978|19497835 AGTTCC 6mer3-8 dme-miR-276a-3p 2L + 19497404 19497472 3'utr swm FlyBase G4177.1 GAGGCGGCCGGGAAAGTTCCGTGGGGCTCACAAGTGTTAGGAAACCCTTAACATGTATTTGTTGTTATT 12 19497421 0.974695135 5 11 76 0.941176471 1.204119983 0.117647059 0.333333333 0.529411765 12 1 0 16 2L:19497404-19497472 6 10.5 321 FBgn0002044 1462.05 43.20666667 66.00333333 0.007181697 0.243018053 0.159082875 -6 -3 -4.5 0.15 dme-miR-33-5p 7mer-A1 AATGCAA 2L 19497920 19497926 + 2L_19497920_19497926_+ 0.782669132 0.782824759 0.782746945 0.000110097 swm FBtr0081245|FBtr0331325 19497383|19497383 19497978|19497978 2L + 19497901 19497944 3'utr swm FlyBase G5376.1 AAAAAATCGTAGCAACGTGAATGCAAAACAGCAAGTTATATAGA 13 19497919 0.841590246 2 12 40 0.928571429 1.113943352 0.214285714 0.076923077 0.142857143 13 1 0 13 2L:19497901-19497944 7 swm FBtr0331325|FBtr0081245 19497383|19497383 19497978|19497978 AATGCAA 7mer-A1 dme-miR-33-5p 2L + 19497898 19497933 3'utr swm FlyBase G4178.1 AGAAAAAAATCGTAGCAACGTGAATGCAAAACAGCA 14 19497920 0.778568695 2 14 34 1 1.230448921 0.117647059 0.214285714 0.352941176 14 0 0 17 2L:19497898-19497933 7 13 322 FBgn0002044 1462.05 43.20666667 66.00333333 0.008891625 0.300879494 0.19695975 1 0 0.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 19502970 19502975 - 2L_19502970_19502975_- 0.999929454 0.999639388 0.999784421 0.000205132 CG10188 FBtr0329963|FBtr0081283|FBtr0081282 19502333|19502333|19502333 19503098|19503128|19503128 2L - 19502956 19502999 3'utr CG10188 FlyBase G11737.1 ATGTACTTCCATACCTGTTGAACTGTACCTATACCATTCGAAAA 32 19502976 0.739775857 5 32 232 1 1.591064607 0.256410256 0.1875 0.333333333 32 0 0 39 2L:19502956-19502999 6 CG10188 FBtr0081282|FBtr0081283|FBtr0329963 19502333|19502333|19502333 19503128|19503128|19503098 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L - 19502957 19502998 3'utr CG10188 FlyBase G9023.1 TGTACTTCCATACCTGTTGAACTGTACCTATACCATTCGAAA 31 19502976 0.670337714 3 31 200 1 1.568201724 0.324324324 0.161290323 0.297297297 31 0 0 37 2L:19502957-19502998 6 27 323 FBgn0032796 423.2433333 9.72 14.90666667 0.06379309 2.777777778 1.811270125 1 1 1 0.15 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 19532732 19532739 + 2L_19532732_19532739_+ 0.629421037 0.629337227 0.629379132 5.93E-05 CG10137 FBtr0081248 19532669 19532985 2L + 19532716 19532751 3'utr CG10137 FlyBase G5389.1 TTATTAGAGCAACTATTCTAGTCAGGATACCTACTC 87 19532731 0.691852162 7 84 505 0.970588235 1.995635195 0.078431373 0.126436782 0.254901961 87 3 0 99 2L:19532716-19532751 8 CG10137 FBtr0081248 19532669 19532985 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L + 19532670 19532756 3'utr CG10137 FlyBase G4187.1 GAAAGCGTACACTTAATCGATCTATTGGCCTAGCGAATTAGCGAATTTATTAGAGCAACTATTCTAGTCAGGATACCTACTCAAGGA 53 19532731 0.974949412 6 51 318 0.977272727 1.934498451 0.113636364 0.433962264 0.659090909 53 2 0 86 2L:19532670-19532756 8 68 324 FBgn0032800 178.3133333 6.72 10.33 0.38135118 10.11904762 6.582768635 1 1 1 0.15 dme-miR-7-5p 7mer-A1 TCTTCCA 2L 19536674 19536680 + 2L_19536674_19536680_+ 0.820380272 0.821907709 0.821143991 0.001080035 CG33116 FBtr0081249 19536464 19537363 2L + 19536652 19536708 3'utr CG33116 FlyBase G5400.1 AATGACTATTCACGTAATGCTCTCTTCCAATGATAATTTTTAAACTCGGTTTACGGT 59 19536676 0.781261388 4 57 583 0.970149254 1.812913357 0.059701493 0.101694915 0.208955224 59 2 0 65 2L:19536652-19536708 7 CG33116 FBtr0081249 19536464 19537363 TCTTCCA 7mer-A1 dme-miR-7-5p 2L + 19536647 19536697 3'utr CG33116 FlyBase G4195.1 TTTCCAATGACTATTCACGTAATGCTCTCTTCCAATGATAATTTTTAAACT 24 19536676 0.917917245 4 23 225 0.971428571 1.531478917 0 0.25 0.485714286 24 1 0 34 2L:19536647-19536697 7 40 325 FBgn0053116 946.2166667 45.74 70.24333333 0.042273616 0.874508089 0.569449058 -2 -2 -2 0.15 dme-bantam-3p 6mer3-8 TGATCT 2L 19536803 19536808 + 2L_19536803_19536808_+ 0.999997935 0.999128728 0.999563332 0.000614617 CG33116 FBtr0081249 19536464 19537363 2L + 19536718 19536866 3'utr CG33116 FlyBase G5401.1 ACTTGACGTTATCTGTAATCCGTATTGTATCCAAACTTCAAAGACCCCTTGTAGATCGATTGAATTTACGAGTAATCATGACAAGTGATCTAATCTGCTGCTAAGATATCCAATAAGTATTAGGTAGTAGGCTAAAGTAGCGGCCAGGC 43 19536803 0.978171313 14 43 294 1 1.748188027 0.25 0.279069767 0.446428571 43 0 0 56 2L:19536718-19536866 6 CG33116 FBtr0081249 19536464 19537363 TGATCT 6mer3-8 dme-bantam-3p 2L + 19536711 19536859 3'utr CG33116 FlyBase G4196.1 AATTCCCACTTGACGTTATCTGTAATCCGTATTGTATCCAAACTTCAAAGACCCCTTGTAGATCGATTGAATTTACGAGTAATCATGACAAGTGATCTAATCTGCTGCTAAGATATCCAATAAGTATTAGGTAGTAGGCTAAAGTAGCG 36 19536803 0.982036807 11 32 240 0.929824561 1.423245874 0.210526316 0.388888889 0.614035088 36 3 1 53 2L:19536711-19536859 6 29 326 FBgn0053116 946.2166667 45.74 70.24333333 0.030648372 0.634018365 0.412850567 0 0 0 0.15 dme-miR-79-3p 7mer-m8 TAGCTTT 2L 19536934 19536940 + 2L_19536934_19536940_+ 0.620132317 0.619836217 0.619984267 0.000209374 CG33116 FBtr0081249 19536464 19537363 2L + 19536890 19536960 3'utr CG33116 FlyBase G5402.1 TTAACTTTGCAACTACAGAGCAGCTAACTACTTGTTCTAGCCTTTAGCTTTCCAACTTCATTGCTACGGTT 11 19536933 0.989966537 4 11 112 1 1.079181246 0 0.090909091 0.166666667 11 0 0 12 2L:19536890-19536960 7 CG33116 FBtr0081249 19536464 19537363 TAGCTTT 7mer-m8 dme-miR-79-3p 2L + 19536894 19536947 3'utr CG33116 FlyBase G4197.1 CTTTGCAACTACAGAGCAGCTAACTACTTGTTCTAGCCTTTAGCTTTCCAACTT 10 19536933 0.802010323 4 10 85 1 1.204119983 0 0.5 0.6875 10 0 0 16 2L:19536894-19536947 7 8 327 FBgn0053116 946.2166667 45.74 70.24333333 0.008454723 0.174901618 0.113889812 1 1 1 0.15 dme-miR-282-5p 6mer2-7 GAGGCT 2L 19580838 19580843 - 2L_19580838_19580843_- 0.999761727 0.999416725 0.999589226 0.000243952 Hakai FBtr0081263|FBtr0081264 19580610|19580610 19581331|19581331 2L - 19580830 19580869 3'utr Hakai FlyBase G11778.1 CGCTGTTGGCCCAGGTGCCCTGATTGGAGGCTCCACCGAC 6 19580845 0.759629189 2 5 29 1 0.77815125 0.333333333 0 0 6 0 0 6 2L:19580830-19580869 6 Hakai FBtr0081264|FBtr0081263 19580610|19580610 19581331|19581331 GAGGCT 6mer2-7 dme-miR-282-5p 2L - 19580822 19580866 3'utr Hakai FlyBase G9051.1 TGTTGGCCCAGGTGCCCTGATTGGAGGCTCCACCGACGCGCCAAC 6 19580845 0.959170192 3 6 29 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2L:19580822-19580866 6 5 328 FBgn0032812 276.3333333 19.83333333 30.45 0.018094089 0.25210084 0.164203612 2 2 2 0.15 dme-miR-184-3p 6mer2-7 CCGTCC 2L 19581228 19581233 - 2L_19581228_19581233_- 0.8767778 0.977299379 0.927038589 0.071079505 Hakai FBtr0081263|FBtr0081264 19580610|19580610 19581331|19581331 2L - 19581210 19581360 stop_codon Hakai FlyBase G11779.1 GCAAGGCGAGTGGTAGCTATGGCTCCTAAACTAAGCTGTCCTGTCTATAAAAAAACAACCGCTTGCCCCTTGCAGCTCTCCGAGTCGTCTGTCCCCATATCCGTTTCCGCCTCCATTGCGTCCCGTCCCGTCCTGTCGCGGCTGCCACTGA 51 19581235 0.976629298 13 47 315 0.950819672 1.763427994 0.295081967 0.176470588 0.31147541 51 3 0 58 2L:19581210-19581360 6 Hakai FBtr0081264|FBtr0081263 19580610|19580610 19581331|19581331 CCGTCC 6mer2-7 dme-miR-184-3p 2L - 19581200 19581271 3'utr Hakai FlyBase G9052.1 TGTCCCCATATCCGTTTCCGCCTCCATTGCGTCCCGTCCCGTCCTGTCGCGGCTGCCACTGACCGGCGGTGT 20 19581235 0.973533567 7 19 115 0.96 1.079181246 0.24 0.2 0.36 20 0 1 24 2L:19581200-19581271 6 24.5 329 FBgn0032812 276.3333333 19.83333333 30.45 0.088661037 1.235294118 0.804597701 2 2 2 0.15 dme-miR-304-5p 7mer-m8 TGAGATT 2L 19586325 19586331 + 2L_19586325_19586331_+ 0.61455534 0.607985324 0.611270332 0.004645692 CG10366 FBtr0081259 19586225 19586440 2L + 19586274 19586345 3'utr CG10366 FlyBase G5446.1 GTTTCCAAATTCGCCGTATGTTGTGTATTTATAGCTGTTTAAAGATATAGTTGAGATTGTTTTGCATACACT 14 19586324 0.990378153 4 13 138 0.944444444 0.929418926 0.055555556 0.214285714 0.388888889 14 0 1 17 2L:19586274-19586345 7 CG10366 FBtr0081259 19586225 19586440 TGAGATT 7mer-m8 dme-miR-304-5p 2L + 19586280 19586343 3'utr CG10366 FlyBase G4232.1 AAATTCGCCGTATGTTGTGTATTTATAGCTGTTTAAAGATATAGTTGAGATTGTTTTGCATACA 12 19586324 0.989172878 4 12 113 1 1.230448921 0.117647059 0.333333333 0.529411765 12 0 0 17 2L:19586280-19586343 7 11 330 FBgn0032814 191.6666667 11.32 17.29666667 0.057391304 0.971731449 0.635960686 1 1 1 0.15 dme-miR-8-3p 7mer-A1 AGTATTA 2L 19730291 19730297 + 2L_19730291_19730297_+ 0.755037545 0.815242605 0.785140075 0.042571434 Lar FBtr0331242|FBtr0112800|FBtr0331239|FBtr0331240|FBtr0081260|FBtr0331241|FBtr0305950 19730161|19730161|19730161|19730161|19730161|19730161|19730161 19732069|19732069|19731561|19731561|19731561|19731561|19731561 2L + 19730162 19730375 3'utr Lar FlyBase G5452.1 AGTGCATTTCTCAATGGGATTGCCAGGTCCACAGAGCTAAAATCTCATCGACCCTGCGTTCGTTGCATACTTATTTCGAACTCTACGCATAATACGCATTTACGATATACACGGATATCATAACTCTAAAGTATTATAGCCAGCTACTGCCCACACTTACTTAATACACCTATACTTATATACGTGGATATGTTTAGTTGATAAGCGCACCCCC 55 19730297 0.978948744 28 48 331 0.876923077 1.755874856 0.230769231 0.181818182 0.307692308 55 8 0 57 2L:19730162-19730375 7 Lar FBtr0305950|FBtr0081260|FBtr0331241|FBtr0331239|FBtr0331240|FBtr0331242|FBtr0112800 19730161|19730161|19730161|19730161|19730161|19730161|19730161 19731561|19731561|19731561|19731561|19731561|19732069|19732069 AGTATTA 7mer-A1 dme-miR-8-3p 2L + 19730161 19730331 stop_codon Lar FlyBase G4239.1 GAGTGCATTTCTCAATGGGATTGCCAGGTCCACAGAGCTAAAATCTCATCGACCCTGCGTTCGTTGCATACTTATTTCGAACTCTACGCATAATACGCATTTACGATATACACGGATATCATAACTCTAAAGTATTATAGCCAGCTACTGCCCACACTTACTTAATACACC 35 19730298 0.986041395 14 26 214 0.760869565 1.243038049 0.043478261 0.285714286 0.456521739 35 10 1 35 2L:19730161-19730331 7 24 331 FBgn0000464 569.28 8.026666667 12.27666667 0.042158516 2.990033223 1.954928048 -6 -7 -6.5 0.15 dme-miR-970-3p 6mer2-7 CTTATG 2L 19730973 19730978 + 2L_19730973_19730978_+ 0.72990186 0.642975269 0.686438564 0.061466388 Lar FBtr0331242|FBtr0112800|FBtr0331239|FBtr0331240|FBtr0081260|FBtr0331241|FBtr0305950 19730161|19730161|19730161|19730161|19730161|19730161|19730161 19732069|19732069|19731561|19731561|19731561|19731561|19731561 2L + 19730880 19730995 3'utr Lar FlyBase G5456.2 CTTGCATAGCGCATATTTTATAAGGCAGCTAGATTCTAAAATTAGTTTTCAAACACAACTTACGTTTTGATCTCCCCGCAAAAGATGACGAACCTTATGGACTGATCGATGTCTTG 150 19730977 0.762559265 19 140 961 0.93989071 1.934498451 0.207650273 0.193333333 0.338797814 150 10 1 172 2L:19730880-19730995 6 Lar FBtr0305950|FBtr0081260|FBtr0331241|FBtr0331239|FBtr0331240|FBtr0331242|FBtr0112800 19730161|19730161|19730161|19730161|19730161|19730161|19730161 19731561|19731561|19731561|19731561|19731561|19732069|19732069 CTTATG 6mer2-7 dme-miR-970-3p 2L + 19730855 19730996 3'utr Lar FlyBase G4242.1 ACGGTCCGTGCAATTAGTCAAAAGTCTTGCATAGCGCATATTTTATAAGGCAGCTAGATTCTAAAATTAGTTTTCAAACACAACTTACGTTTTGATCTCCCCGCAAAAGATGACGAACCTTATGGACTGATCGATGTCTTGG 120 19730977 0.789540178 17 111 695 0.945054945 2.235528447 0.335164835 0.375 0.587912088 120 10 0 172 2L:19730855-19730996 6 66.5 332 FBgn0000464 569.28 8.026666667 12.27666667 0.116814221 8.284883721 5.416779799 -4 -4 -4 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 19731199 19731204 + 2L_19731199_19731204_+ 0.998331105 0.996446788 0.997388946 0.001332401 Lar FBtr0331242|FBtr0112800|FBtr0331239|FBtr0331240|FBtr0081260|FBtr0331241|FBtr0305950 19730161|19730161|19730161|19730161|19730161|19730161|19730161 19732069|19732069|19731561|19731561|19731561|19731561|19731561 2L + 19731117 19731223 3'utr Lar FlyBase G5458.1 ATTCCTGTATATACCACAGTCGATACCCGAGCTAGCCACTTATGTATGTGTAATTTAGATTGAAAAGCTATGAAAAGTTATTGTACCTAAGGTGTATGAAGACATAG 35 19731198 0.898902249 8 33 235 0.95 1.278753601 0.425 0.142857143 0.25 35 1 1 38 2L:19731117-19731223 6 Lar FBtr0305950|FBtr0081260|FBtr0331241|FBtr0331239|FBtr0331240|FBtr0331242|FBtr0112800 19730161|19730161|19730161|19730161|19730161|19730161|19730161 19731561|19731561|19731561|19731561|19731561|19732069|19732069 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 19731122 19731226 3'utr Lar FlyBase G4244.1 TGTATATACCACAGTCGATACCCGAGCTAGCCACTTATGTATGTGTAATTTAGATTGAAAAGCTATGAAAAGTTATTGTACCTAAGGTGTATGAAGACATAGAGA 40 19731198 0.933378582 8 37 265 0.947368421 1.431363764 0.298245614 0.375 0.561403509 40 2 1 54 2L:19731122-19731226 6 25.5 333 FBgn0000464 569.28 8.026666667 12.27666667 0.044793423 3.176910299 2.077111051 1 1 1 0.15 dme-miR-1012-3p 7mer-m8 TTGACTA 2L 19736823 19736829 + 2L_19736823_19736829_+ 0.631369706 0.619806159 0.625587932 0.008176629 Nf-YB FBtr0081289|FBtr0343854 19736722|19736722 19737088|19736956 2L + 19736806 19736837 3'utr Nf-YB FlyBase G5466.1 CTAACAGTACACCTTGATTGACTATTTAAGTT 6 19736823 0.874956832 4 6 39 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2L:19736806-19736837 7 Nf-YB FBtr0343854|FBtr0081289 19736722|19736722 19736956|19737088 TTGACTA 7mer-m8 dme-miR-1012-3p 2L + 19736806 19736842 3'utr Nf-YB FlyBase G4249.1 CTAACAGTACACCTTGATTGACTATTTAAGTTAATAT 7 19736824 0.654809606 5 7 62 1 1.079181246 0.083333333 0.428571429 0.666666667 7 0 0 12 2L:19736806-19736842 7 6.5 334 FBgn0032816 140.6666667 20.89666667 32.17 0.046208531 0.311054395 0.202051601 0 -1 -0.5 0.15 dme-miR-276a-3p 6mer2-7 GTTCCT 2L 19743020 19743025 - 2L_19743020_19743025_- 0.994447368 0.995689195 0.995068282 0.000878085 CG10631 FBtr0081324 19742815 19743219 2L - 19742965 19743079 3'utr CG10631 FlyBase G11803.1 TCATAAGTGGCTTGTGAAGAAAAGATATGCCATACAAAGAAACAAACACAAAATGTTCCTTAAGTTTTTGTTTTTACTTATTATACATACGTACTTTAACTGTGAGATAAATGTG 20 19743026 0.963390161 9 19 110 0.964285714 1.130333768 0.035714286 0.25 0.464285714 20 0 1 27 2L:19742965-19743079 6 CG10631 FBtr0081324 19742815 19743219 GTTCCT 6mer2-7 dme-miR-276a-3p 2L - 19743016 19743079 3'utr CG10631 FlyBase G9074.1 TCATAAGTGGCTTGTGAAGAAAAGATATGCCATACAAAGAAACAAACACAAAATGTTCCTTAAG 14 19743026 0.943741751 6 14 56 1 1.255272505 0 0.285714286 0.444444444 14 0 0 18 2L:19743016-19743079 6 8.5 335 FBgn0032817 1456.62 14.47 22.22333333 0.005835427 0.587422253 0.382480876 1 1 1 0.15 dme-miR-79-3p 6mer3-8 TAGCTT 2L 1976453 1976458 - 2L_1976453_1976458_- 0.9935033 0.994375343 0.993939322 0.000616597 CG15356 FBtr0077869 1975461 1976541 2L - 1976393 1976511 3'utr CG15356 FlyBase G6884.1 AGAACGCACACACACACAGCAGACCCGGTTTGAATTAGATTTAGTTGGTAGTTTAGCTTGAATGTCGAAGGTTTTCCCACTAATTTCCAATTATCGCAACCCGCAGCCTTGGAGCAAAG 63 1976459 0.987509438 10 57 511 0.901408451 1.505149978 0.14084507 0.095238095 0.197183099 63 6 1 64 2L:1976393-1976511 6 CG15356 FBtr0077869 1975461 1976541 TAGCTT 6mer3-8 dme-miR-79-3p 2L - 1976438 1976508 3'utr CG15356 FlyBase G5380.1 ACGCACACACACACAGCAGACCCGGTTTGAATTAGATTTAGTTGGTAGTTTAGCTTGAATGTCGAAGGTTT 37 1976459 0.985148426 6 37 303 1 1.755874856 0.263157895 0.486486486 0.666666667 37 0 0 57 2L:1976438-1976508 6 28 336 FBgn0031377 219.9966667 6.103333333 9.273333333 0.127274656 4.587657018 3.019410496 1 1 1 0.15 dme-miR-980-5p 6mer3-8 GAAAAA 2L 19776906 19776911 - 2L_19776906_19776911_- 0.575888785 0.990661159 0.783274972 0.293288377 CdGAPr FBtr0300966|FBtr0081318|FBtr0332179|FBtr0300967 19776255|19775102|19774872|19776255 19776941|19776941|19776941|19776941 2L - 19776852 19777019 stop_codon CdGAPr FlyBase G11831.1 AACAGAGAAAAGATCTCACCACAATTCTCAATACGCGACGTGACAGCGATGTTCGAATCTCGTTCACAAAATCAATAGGCTAAGGCAACTTTAGCAACTAATTACATCGAAAAAATGAGACCGCTACCTACATATAATCACAGTTCTGGAGCAGCGTGTATATATGCC 84 19776904 0.980423884 17 80 370 0.946808511 1.648360011 0.117021277 0.119047619 0.212765957 84 4 1 89 2L:19776852-19777019 6 CdGAPr FBtr0332179|FBtr0300967|FBtr0300966|FBtr0081318 19774872|19776255|19776255|19775102 19776941|19776941|19776941|19776941 GAAAAA 6mer3-8 dme-miR-980-5p 2L - 19776848 19776916 5'utr CdGAPr FlyBase G9092.1 ACATCGAAAAAATGAGACCGCTACCTACATATAATCACAGTTCTGGAGCAGCGTGTATATATGCCAATG 25 19776904 0.974267814 5 24 75 0.973684211 1.568201724 0.052631579 0.4 0.605263158 25 1 0 37 2L:19776848-19776916 6 26 337 FBgn0032821 977 18.21666667 27.97 0.026612078 1.42726441 0.929567394 -7 -7 -7 0.15 dme-miR-970-3p 6mer2-7 CTTATG 2L 19793783 19793788 - 2L_19793783_19793788_- 1 0.999999804 0.999999902 1.41E-07 fs(2)ltoPP43 FBtr0332246|FBtr0081317 19793609|19793484 19794265|19794524 2L - 19793737 19793831 3'utr fs(2)ltoPP43 FlyBase G11855.1 AGTGTACTATTTGGAATCGTTTTAGGCAAATGTCTCTCATTACCTTATGTTCATAGAATTAATTAGCTATTAGATTAGAATAATTTACCCCCACA 23 19793801 0.990687535 11 20 204 0.884615385 1.06069784 0.192307692 0.130434783 0.230769231 23 2 1 23 2L:19793737-19793831 6 fs(2)ltoPP43 FBtr0081317|FBtr0332246 19793484|19793609 19794524|19794265 CTTATG 6mer2-7 dme-miR-970-3p 2L - 19793775 19793813 3'utr fs(2)ltoPP43 FlyBase G9106.1 GTTTTAGGCAAATGTCTCTCATTACCTTATGTTCATAGA 12 19793792 0.674375356 3 11 96 0.933333333 1.146128036 0.133333333 0.166666667 0.333333333 12 1 0 14 2L:19793775-19793813 6 12.5 338 FBgn0004811 606.5633333 48.93333333 75.4 0.020607906 0.255449591 0.165782493 13 4 8.5 0.15 "dme-miR-995-3p,dme-miR-998-3p" 7mer-A1 GGTGCTA 2L 19794454 19794460 - 2L_19794454_19794460_- 0.823348994 0.821068592 0.822208793 0.001612486 fs(2)ltoPP43 FBtr0081317 19793484 19794524 2L - 19794446 19794483 5'utr fs(2)ltoPP43 FlyBase G11858.1 TCTAAGCGGTGTGTCTGTGTGTCGGTGCTATGGGCGTA 9 19794453 0.82185157 5 8 70 0.909090909 1 0.363636364 0.222222222 0.363636364 9 1 0 10 2L:19794446-19794483 7 fs(2)ltoPP43 FBtr0081317 19793484 19794524 GGTGCTA 7mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 2L - 19794443 19794480 5'utr fs(2)ltoPP43 FlyBase G9108.1 AAGCGGTGTGTCTGTGTGTCGGTGCTATGGGCGTATCT 9 19794454 0.815659624 3 9 77 1 1.041392685 0.272727273 0.222222222 0.363636364 9 0 0 11 2L:19794443-19794480 7 9 339 FBgn0004811 606.5633333 48.93333333 75.4 0.014837692 0.183923706 0.119363395 -7 -6 -6.5 0.15 dme-bantam-3p 6mer3-8 TGATCT 2L 1984546 1984551 - 2L_1984546_1984551_- 0.999769884 0.997362342 0.998566113 0.00170243 Got2 FBtr0077867|FBtr0077868 1984510|1984510 1984705|1984705 2L - 1984520 1984617 3'utr Got2 FlyBase G6898.1 TGCGAAGTCTAGATAAGCCAATGCATTTTGCACACTCTCTATCCATATCTCTGTATATAAGCTAAATGATCTGCCTTTTAAAAAATAAAGCATTTAAA 290 1984551 0.780995854 17 275 2269 0.953168044 1.693978059 0.060606061 0.196551724 0.358126722 290 11 6 346 2L:1984520-1984617 6 Got2 FBtr0077867|FBtr0077868 1984510|1984510 1984705|1984705 TGATCT 6mer3-8 dme-bantam-3p 2L - 1984527 1984621 3'utr Got2 FlyBase G5386.1 AAATTGCGAAGTCTAGATAAGCCAATGCATTTTGCACACTCTCTATCCATATCTCTGTATATAAGCTAAATGATCTGCCTTTTAAAAAATAAAGC 163 1984551 0.796026987 18 155 1210 0.963709677 1.901276646 0.056451613 0.374233129 0.588709677 163 7 2 239 2L:1984527-1984621 6 207.5 340 FBgn0001125 531.6666667 41.34 63.08 0.390282132 5.019351717 3.289473684 0 0 0 0.15 dme-miR-8-3p 7mer-m8 CAGTATT 2L 20058264 20058270 - 2L_20058264_20058270_- 0.651699191 0.657889646 0.654794418 0.004377274 barr FBtr0081348|FBtr0343850|FBtr0081349 20058161|20058161|20058161 20058384|20058384|20058384 2L - 20058234 20058365 3'utr barr FlyBase G11864.2 AATTCATAGTTCTAGTTGCCCTTAAATGCTGTTACAATTTATTTTCACGGCTACTCCTTAATCTCTTACCTCTATTTTTAACTCCCAATTCGTATCAGTATTCTGAAACAGATATCCTCACCCCAGTCGAAT 86 20058271 0.74930785 14 80 686 0.940594059 1.977723605 0.00990099 0.151162791 0.277227723 86 6 0 95 2L:20058234-20058365 7 barr FBtr0081348|FBtr0343850|FBtr0081349 20058161|20058161|20058161 20058384|20058384|20058384 CAGTATT 7mer-m8 dme-miR-8-3p 2L - 20058240 20058288 3'utr barr FlyBase G9115.2 TTAACTCCCAATTCGTATCAGTATTCTGAAACAGATATCCTCACCCCAG 32 20058271 0.734508833 7 24 227 0.803921569 1.612783857 0.078431373 0.4375 0.647058824 32 10 0 41 2L:20058240-20058288 7 31 341 FBgn0014127 727.3466667 33.53666667 51.05 0.042620667 0.924361395 0.607247796 1 1 1 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 2L 20063986 20063991 + 2L_20063986_20063991_+ 0.999818968 0.999995981 0.999907475 0.000125158 lok FBtr0081330|FBtr0306234|FBtr0081328|FBtr0081329 20063974|20063184|20063974|20063974 20064378|20064378|20064381|20064381 2L + 20063966 20064021 stop_codon lok FlyBase G5497.1 GCGACGCTAGGTTTCGTTTCTGTGTTTCCATCGTTAATACGTGAGGGTCGAGGCGC 49 20063984 0.73622517 10 24 381 0.545454545 1.176091259 0.327272727 0.12244898 0.218181818 49 24 1 30 2L:20063966-20064021 6 lok FBtr0081328|FBtr0081329|FBtr0081330|FBtr0306234 20063974|20063974|20063974|20063184 20064381|20064381|20064378|20064378 TGTGTT 6mer3-8 dme-miR-317-3p 2L + 20063938 20064006 stop_codon lok FlyBase G4276.1 ACTTCCTTGAGCCACCCACCAAGCGATCGCGACGCTAGGTTTCGTTTCTGTGTTTCCATCGTTAATACG 24 20063983 0.997549566 5 9 143 0.342857143 1.079181246 0.285714286 0.416666667 0.6 24 23 0 12 2L:20063938-20064006 6 16.5 342 FBgn0019686 524.4266667 29.24666667 44.53333333 0.031462931 0.564166857 0.370508982 2 3 2.5 0.15 dme-miR-276a-3p 7mer-A1 GTTCCTA 2L 20073147 20073153 + 2L_20073147_20073153_+ 0.82092465 0.815339352 0.818132001 0.003949333 bwa FBtr0081331 20072671 20073719 2L + 20073118 20073170 3'utr bwa FlyBase G5504.1 AATTCATCCCATGACTTCCAGAACAAATGGTTCCTACGCTTTCCCAAAGAGAC 16 20073145 0.966319387 3 16 85 1 1.255272505 0.055555556 0.125 0.222222222 16 0 0 18 2L:20073118-20073170 7 bwa FBtr0081331 20072671 20073719 GTTCCTA 7mer-A1 dme-miR-276a-3p 2L + 20073097 20073166 3'utr bwa FlyBase G4282.1 GACTGTGATATGTTATGAACTAATTCATCCCATGACTTCCAGAACAAATGGTTCCTACGCTTTCCCAAAG 14 20073145 0.990700854 3 13 78 0.894736842 1.230448921 0.052631579 0.357142857 0.526315789 14 2 0 17 2L:20073097-20073166 7 13 343 FBgn0045064 300.39 20.15 30.82666667 0.043277073 0.64516129 0.421712803 2 2 2 0.15 dme-miR-283-5p 6mer3-8 TGATAT 2L 20073504 20073509 + 2L_20073504_20073509_+ 0.99951454 0.999909575 0.999712057 0.000279378 bwa FBtr0331184|FBtr0081331 20073453|20072671 20073719|20073719 2L + 20073484 20073521 3'utr bwa FlyBase G5505.1 AAACAGAGACATACACAGCGTGATATAAGTTAGAGTTG 15 20073510 0.906964008 3 11 80 0.65 1.113943352 0.25 0.266666667 0.45 15 7 0 13 2L:20073484-20073521 6 bwa FBtr0331184|FBtr0081331 20073453|20072671 20073719|20073719 TGATAT 6mer3-8 dme-miR-283-5p 2L + 20073488 20073523 3'utr bwa FlyBase G4283.1 AGAGACATACACAGCGTGATATAAGTTAGAGTTGCA 8 20073495 0.884015696 3 6 43 0.818181818 0.954242509 0.272727273 0.375 0.545454545 8 2 0 9 2L:20073488-20073523 6 11.5 344 FBgn0045064 300.39 20.15 30.82666667 0.038283565 0.570719603 0.373053633 -6 9 1.5 0.15 dme-miR-277-3p 6mer3-8 TGCATT 2L 20081774 20081779 - 2L_20081774_20081779_- 0.992287257 0.998376575 0.995331916 0.004305785 fok FBtr0310559 20081604 20082782 2L - 20081761 20081790 3'utr fok FlyBase G11884.1 GATTTAACAATTGCATTAGTCATTTAAGTA 6 20081775 0.743476026 3 6 50 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 2L:20081761-20081790 6 fok FBtr0310559 20081604 20082782 TGCATT 6mer3-8 dme-miR-277-3p 2L - 20081762 20081796 3'utr fok FlyBase G9128.1 AAAAACGATTTAACAATTGCATTAGTCATTTAAGT 6 20081775 0.69648804 4 6 51 1 1 0.4 0.333333333 0.6 6 0 0 10 2L:20081762-20081796 6 6 345 FBgn0263773 896.66 79.66 118.1266667 0.0066915 0.07532011 0.050792934 -4 -4 -4 0.15 dme-miR-980-3p 7mer-A1 GCAGCTA 2L 20082577 20082583 - 2L_20082577_20082583_- 0.823320126 0.622279201 0.722799663 0.142157384 fok FBtr0310558|FBtr0310559 20082302|20081604 20082782|20082782 2L - 20082571 20082613 3'utr fok FlyBase G11891.1 AGATTGCGCGAGAGAGCGAGACAGCAGCCTGCAGCTACAATAA 13 20082584 0.747986033 4 11 19 0.857142857 0.77815125 0.214285714 0.076923077 0.142857143 13 1 1 12 2L:20082571-20082613 7 fok FBtr0310558|FBtr0310559 20082302|20081604 20082782|20082782 GCAGCTA 7mer-A1 dme-miR-980-3p 2L - 20082570 20082629 3'utr fok FlyBase G9132.1 AAGCTGTCGAAGACGAAGATTGCGCGAGAGAGCGAGACAGCAGCCTGCAGCTACAATAAT 10 20082578 0.825257513 5 8 21 0.833333333 1.176091259 0.555555556 0.5 0.722222222 10 3 0 15 2L:20082570-20082629 7 8 346 FBgn0263773 896.66 79.66 118.1266667 0.008921999 0.100426814 0.067723912 1 -5 -2 0.15 dme-miR-1006-3p 6mer3-8 CGAATT 2L 20093153 20093158 - 2L_20093153_20093158_- 0.999999952 0.999999768 0.99999986 1.41E-07 Taf13 FBtr0081340 20093086 20093223 2L - 20093124 20093196 3'utr Taf13 FlyBase G11903.1 CCAGGTATAAGCCAAACCTAGCAGTTAGCTCCAAGATGCGAATTATTTTTAATGTCTTTAATACTCTAAGCTA 18 20093188 0.967328873 8 18 99 1 1.322219295 0.095238095 0.166666667 0.285714286 18 0 0 21 2L:20093124-20093196 6 Taf13 FBtr0081340 20093086 20093223 CGAATT 6mer3-8 dme-miR-1006-3p 2L - 20093139 20093195 3'utr Taf13 FlyBase G9139.1 CAGGTATAAGCCAAACCTAGCAGTTAGCTCCAAGATGCGAATTATTTTTAATGTCTT 7 20093169 0.987594947 5 6 45 0.777777778 0.84509804 0.222222222 0.285714286 0.444444444 7 2 0 7 2L:20093139-20093195 6 6.5 347 FBgn0032847 298 62.63 96.09 0.021812081 0.103784129 0.067644916 30 11 20.5 0.15 dme-miR-965-3p 6mer3-8 TACGCT 2L 201533 201538 + 2L_201533_201538_+ 0.952645114 0.640230862 0.796437988 0.220910199 spen FBtr0330652|FBtr0332336|FBtr0078122|FBtr0330653|FBtr0078123|FBtr0078121|FBtr0306341|FBtr0332337 201413|201413|201413|201413|201413|201413|201413|201413 201588|203250|201588|203250|203250|203397|201588|201588 2L + 201461 201586 3'utr spen FlyBase G617.1 CCAGATGTTAAACTTCACAGGCTTACACGACAACATAAGAGGAACCAGATAAAGAAACCAACAAAAACATGTTACGCTCTTCTAGTATTTTAAGTAATTTTAAATAGCGATTAAACAAGCAAAAGT 693 201532 0.947549737 23 669 7251 0.9625323 2.173186268 0.025839793 0.098124098 0.19250646 693 25 4 745 2L:201461-201586 6 spen FBtr0078123|FBtr0078121|FBtr0332336|FBtr0330653 201413|201413|201413|201413 203250|203397|203250|203250 TACGCT 6mer3-8 dme-miR-965-3p 2L + 201471 201604 3'utr spen FlyBase G492.2 AACTTCACAGGCTTACACGACAACATAAGAGGAACCAGATAAAGAAACCAACAAAAACATGTTACGCTCTTCTAGTATTTTAAGTAATTTTAAATAGCGATTAAACAAGCAAAAGTTTAAAAAAAAGCAAAGGA 392 201532 0.990917382 21 357 3876 0.92293578 1.6601753 0.044036697 0.304347826 0.500917431 391 32 10 503 2L:201471-201604 6 500.5 348 FBgn0016977 7307.703333 43.43 66.34333333 0.06848937 11.52429196 7.544088831 1 1 1 0.15 dme-bantam-3p 8mer-A1 TGATCTCA 2L 201860 201867 + 2L_201860_201867_+ 0.631105481 0.63110566 0.63110557 1.41E-07 spen FBtr0332336|FBtr0330653|FBtr0078123|FBtr0078121 201413|201413|201413|201413 203250|203250|203250|203397 2L + 201800 201890 3'utr spen FlyBase G618.3 TTATATAACTCTCCGTAATTAAAAACCTTAAAGAAAAAGCTTGCAAAGTATCGTTAAGTTTGATCTCAAGAAAGAATGTTTTATTTTTGCT 1179 201859 0.786842431 15 1148 9915 0.973856209 2.086036093 0.328976035 0.146734521 0.269426289 1179 26 10 1341 2L:201800-201890 8 spen FBtr0078123|FBtr0078121|FBtr0332336|FBtr0330653 201413|201413|201413|201413 203250|203397|203250|203250 TGATCTCA 8mer-A1 dme-bantam-3p 2L + 201788 201902 3'utr spen FlyBase G495.1 TGTCTAAATTAATTATATAACTCTCCGTAATTAAAAACCTTAAAGAAAAAGCTTGCAAAGTATCGTTAAGTTTGATCTCAAGAAAGAATGTTTTATTTTTGCTTATTTAAAAAGA 710 201859 0.986641201 16 680 5881 0.957364341 1.994756945 0.304263566 0.322535211 0.533914729 710 35 9 988 2L:201788-201902 8 935 349 FBgn0016977 7307.703333 43.43 66.34333333 0.127947175 21.52889708 14.09335276 1 1 1 0.15 dme-miR-282-5p 7mer-m8 AGAGGCT 2L 202284 202290 + 2L_202284_202290_+ 0.588429663 0.504819678 0.546624671 0.059121198 spen FBtr0332336|FBtr0330653|FBtr0078123|FBtr0078121 201413|201413|201413|201413 203250|203250|203250|203397 2L + 201907 202413 3'utr spen FlyBase G619.1 AACAAACAGAAAAACCTACACATACAAATTGAATTGAAAGAAATGTTACAGAAAGCTTACAACATATTAACTGTTTACTGTACTATGCATACTACTACCCATACATAATATTAATATTCGATCCTAATCCTAAAACGATTAAGTTTTTATTGGTGAATAACTTTCGACTACTTCGATAGAAACGTAACTACACCACGTTATACAAAGTTTCCGCCTTCGAACAACCGACCATTTTTTTTGACAGATCGGTTCCTTGGCTCTATGGAATGCCTGCATATAAAACTAGTATACAGGGCCTAGCATAGACCCAAAGAACTTAAGATGAGTCCGGACTGTCACCCACGCTGTTAAGCACAATTAGGTTTAAAGTTGCGCCCAGAGGCTTTTCCTACGATAACATACACACACATACATTATACTACGATTATTTATCTAGACGCGTATTTAATTATAATTAATATGTTAAGCTCATTATTTTAAAACTCAGACACGTTTCACATCGTGTTT 497 202291 0.982279671 84 457 3689 0.922535211 2.020361283 0.107394366 0.116700201 0.227112676 497 40 4 524 2L:201907-202413 7 spen FBtr0078123|FBtr0078121|FBtr0332336|FBtr0330653 201413|201413|201413|201413 203250|203397|203250|203250 AGAGGCT 7mer-m8 dme-miR-282-5p 2L + 202092 202305 3'utr spen FlyBase G496.1 AACTACACCACGTTATACAAAGTTTCCGCCTTCGAACAACCGACCATTTTTTTTGACAGATCGGTTCCTTGGCTCTATGGAATGCCTGCATATAAAACTAGTATACAGGGCCTAGCATAGACCCAAAGAACTTAAGATGAGTCCGGACTGTCACCCACGCTGTTAAGCACAATTAGGTTTAAAGTTGCGCCCAGAGGCTTTTCCTACGATAACA 261 202291 0.823164389 33 237 1904 0.912234043 1.632204133 0.085106383 0.346153846 0.54787234 260 26 7 343 2L:202092-202305 7 178 350 FBgn0016977 7307.703333 43.43 66.34333333 0.024357858 4.09854939 2.683012611 -7 -7 -7 0.15 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 20345095 20345102 + 2L_20345095_20345102_+ 0.62479649 0.624692001 0.624744245 7.39E-05 spir FBtr0339234 20344661 20348386 2L + 20345071 20345114 3'utr spir FlyBase G5542.1 TGTATTTTTAACTTGACAAAAAATTACGCTTACAAACAAAATAA 84 20345094 0.833271381 4 81 387 0.98019802 1.995635195 0 0.166666667 0.306930693 84 2 0 99 2L:20345071-20345114 8 spir FBtr0339234 20344661 20348386 TACGCTTA 8mer-A1 dme-miR-965-3p 2L + 20345039 20345114 3'utr spir FlyBase G4304.1 TTTCTCGGCTGCCAATAATCGTATAAAAATAATGTATTTTTAACTTGACAAAAAATTACGCTTACAAACAAAATAA 57 20345094 0.946662175 4 56 242 1 1.908485019 0 0.263157895 0.481481481 57 0 0 81 2L:20345039-20345114 8 68.5 351 FBgn0003475 1306.356667 49.26 74.34 0.05243591 1.390580593 0.921442023 1 1 1 0.15 dme-miR-305-3p 6mer2-7 TGTGCC 2L 20346153 20346158 + 2L_20346153_20346158_+ 0.998710151 0.999472272 0.999091211 0.000538886 spir FBtr0339234 20344661 20348386 2L + 20346135 20346169 3'utr spir FlyBase G5543.1 AGCGTCGCGTCTGCTTCCTGTGCCTGCGCACTCGG 7 20346153 0.813906897 2 7 51 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 2L:20346135-20346169 6 spir FBtr0339234 20344661 20348386 TGTGCC 6mer2-7 dme-miR-305-3p 2L + 20346133 20346166 3'utr spir FlyBase G4305.1 AAAGCGTCGCGTCTGCTTCCTGTGCCTGCGCACT 5 20346153 0.708734623 2 5 35 1 0.84509804 0 0.4 0.571428571 5 0 0 7 2L:20346133-20346166 6 6 352 FBgn0003475 1306.356667 49.26 74.34 0.004592926 0.12180268 0.08071025 0 0 0 0.15 dme-bantam-3p 7mer-m8 TGATCTC 2L 20346351 20346357 + 2L_20346351_20346357_+ 0.657723426 0.660967973 0.659345699 0.002294279 spir FBtr0339234 20344661 20348386 2L + 20346335 20346375 3'utr spir FlyBase G5544.1 AACGTGCCCCTCGTGCTGATCTCGCCATCGCTGCTGTCCAG 15 20346351 0.773587931 2 14 98 0.933333333 1.146128036 0.266666667 0 0 15 1 0 14 2L:20346335-20346375 7 spir FBtr0339234 20344661 20348386 TGATCTC 7mer-m8 dme-bantam-3p 2L + 20346334 20346375 3'utr spir FlyBase G4306.1 AAACGTGCCCCTCGTGCTGATCTCGCCATCGCTGCTGTCCAG 7 20346350 0.728864804 3 7 41 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 2L:20346334-20346375 7 11 353 FBgn0003475 1306.356667 49.26 74.34 0.008420365 0.223304913 0.147968792 0 1 0.5 0.15 dme-miR-79-3p 6mer2-7 AGCTTT 2L 20347554 20347559 + 2L_20347554_20347559_+ 0.996274681 0.985639821 0.990957251 0.00752001 spir FBtr0339234|FBtr0306556|FBtr0081353|FBtr0081355|FBtr0301884|FBtr0081352 20344661|20347168|20347168|20347168|20347168|20347168 20348386|20348386|20348386|20348386|20348386|20348386 2L + 20347501 20347566 3'utr spir FlyBase G5548.1 ATCGTGTTAGTCTAGTGAATAAGCAGAGGAGAATACCGAGAATTCCTGGCTGAAGCTTTGTACATT 63 20347544 0.884710222 6 58 287 0.932432432 1.838849091 0.081081081 0.142857143 0.27027027 63 5 0 69 2L:20347501-20347566 6 spir FBtr0301884|FBtr0081352|FBtr0339234|FBtr0306556|FBtr0081353|FBtr0081355 20347168|20347168|20344661|20347168|20347168|20347168 20348386|20348386|20348386|20348386|20348386|20348386 AGCTTT 6mer2-7 dme-miR-79-3p 2L + 20347513 20347563 3'utr spir FlyBase G4309.1 TAGTGAATAAGCAGAGGAGAATACCGAGAATTCCTGGCTGAAGCTTTGTAC 26 20347543 0.816031972 6 23 118 0.840909091 1.568201724 0.295454545 0.5 0.704545455 26 7 0 37 2L:20347513-20347563 6 26.5 354 FBgn0003475 1306.356667 49.26 74.34 0.020285425 0.537961835 0.356470272 10 11 10.5 0.15 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 20348136 20348141 + 2L_20348136_20348141_+ 0.637088198 0.816771881 0.72693004 0.127055563 spir FBtr0339234|FBtr0306556|FBtr0081353|FBtr0081355|FBtr0301884|FBtr0081352 20344661|20347168|20347168|20347168|20347168|20347168 20348386|20348386|20348386|20348386|20348386|20348386 2L + 20348112 20348151 3'utr spir FlyBase G5550.1 CGACGTCTATATAATTGTACAAGCTGATGATGCAAAGCAA 9 20348139 0.688463713 3 9 49 1 0.954242509 0.222222222 0 0 9 0 0 9 2L:20348112-20348151 6 spir FBtr0301884|FBtr0081352|FBtr0339234|FBtr0306556|FBtr0081353|FBtr0081355 20347168|20347168|20344661|20347168|20347168|20347168 20348386|20348386|20348386|20348386|20348386|20348386 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L + 20348109 20348153 3'utr spir FlyBase G4310.1 AAGCGACGTCTATATAATTGTACAAGCTGATGATGCAAAGCAAAC 12 20348139 0.966943091 2 10 58 0.8 0.903089987 0.3 0.416666667 0.65 12 3 1 16 2L:20348109-20348153 6 10.5 355 FBgn0003475 1306.356667 49.26 74.34 0.008037621 0.213154689 0.141242938 -3 -3 -3 0.15 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 2L 20361281 20361288 + 2L_20361281_20361288_+ 0.617717205 0.623584532 0.620650868 0.004148808 RtGEF FBtr0302106 20360849 20361429 2L + 20361255 20361314 3'utr RtGEF FlyBase G5562.1 AAGATCAACAAACTCAACTCTGCAATTGGTGCTAAGCAGCGAACAAAGGAATCCAAAGTT 151 20361280 0.765162728 4 146 773 0.981707317 2.206825876 0.237804878 0.079470199 0.152439024 151 3 0 161 2L:20361255-20361314 8 RtGEF FBtr0302106 20360849 20361429 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 2L + 20361198 20361308 3'utr RtGEF FlyBase G4319.1 ATGTTTAAGAGAAAAGATTGATTTTTTGGTTGAACCATTGGCCACTGATTTCGTTTTAAGATCAACAAACTCAACTCTGCAATTGGTGCTAAGCAGCGAACAAAGGAATCC 109 20361280 0.963488341 8 107 556 0.967567568 2.252853031 0.210810811 0.495412844 0.702702703 109 6 0 179 2L:20361198-20361308 8 125.5 356 FBgn0015803 1414.776667 51.74333333 79.37666667 0.08870658 2.425433228 1.581069164 1 1 1 0.15 dme-miR-190-5p 6mer3-8 ACATAT 2L 20364642 20364647 + 2L_20364642_20364647_+ 0.977083845 0.9974924 0.987288123 0.014431059 RtGEF FBtr0081357|FBtr0112885|FBtr0336747|FBtr0081356 20364489|20364489|20360566|20364489 20365254|20365254|20365254|20365254 2L + 20364581 20364687 3'utr RtGEF FlyBase G5566.1 TCTTAGACACTTTTACTTTGCATCTTCGGGGGGCAGTGGGTCAATTACCAAAAAATTATCTACATATGGACTTTGTAATCGTATATGGATTGTATTTACCGAGTACT 178 20364647 0.892882906 16 178 1550 1 2.33243846 0.106976744 0.202247191 0.339534884 178 0 0 215 2L:20364581-20364687 6 RtGEF FBtr0081356|FBtr0336747|FBtr0112885|FBtr0081357 20364489|20360566|20364489|20364489 20365254|20365254|20365254|20365254 ACATAT 6mer3-8 dme-miR-190-5p 2L + 20364589 20364686 3'utr RtGEF FlyBase G4324.1 ACTTTTACTTTGCATCTTCGGGGGGCAGTGGGTCAATTACCAAAAAATTATCTACATATGGACTTTGTAATCGTATATGGATTGTATTTACCGAGTAC 134 20364647 0.880216575 11 130 1164 0.978723404 1.963787827 0.085106383 0.305970149 0.505319149 134 3 1 184 2L:20364589-20364686 6 119 357 FBgn0015803 1414.776667 51.74333333 79.37666667 0.084112216 2.29981318 1.49918112 -5 -5 -5 0.15 dme-miR-92b-3p 6mer2-7 TGCAAT 2L 20423015 20423020 + 2L_20423015_20423020_+ 0.817471586 0.999325037 0.908398311 0.128589772 Arpc2 FBtr0346418|FBtr0081358 20422495|20422495 20423027|20423027 2L + 20422983 20423032 3'utr Arpc2 FlyBase G5589.1 AATCGGAATTAATAAAAACGAGAAAATCAAACTGCAATGTAAAATAAAAA 8 20423020 0.938144659 3 8 31 1 0.954242509 0 0.125 0.222222222 8 0 0 9 2L:20422983-20423032 6 Arpc2 FBtr0081358|FBtr0346418 20422495|20422495 20423027|20423027 TGCAAT 6mer2-7 dme-miR-92b-3p 2L + 20422983 20423034 3'utr Arpc2 FlyBase G4345.1 AATCGGAATTAATAAAAACGAGAAAATCAAACTGCAATGTAAAATAAAAAAA 11 20423009 0.847411698 2 10 36 0.923076923 1.079181246 0.538461538 0.181818182 0.307692308 11 1 0 12 2L:20422983-20423034 6 9 358 FBgn0032859 3866.656667 244 375.5233333 0.002327592 0.036885246 0.023966553 -5 6 0.5 0.15 dme-miR-184-3p 6mer2-7 CCGTCC 2L 2043247 2043252 + 2L_2043247_2043252_+ 0.999995368 0.999999889 0.999997629 3.18E-06 Su(dx) FBtr0339529|FBtr0077823|FBtr0077822|FBtr0077824|FBtr0334778 2043182|2043182|2043182|2043182|2043182 2043677|2044372|2044372|2044372|2043677 2L + 2043182 2043412 stop_codon Su(dx) FlyBase G1147.1 GAGTGGCAGTCGATTTGTGGTCGGTTTGTTGATTAATGTTTAATTCCAGTTAAGCGCCTGCTTTACCGTCCCCTCCCCCTTTCCATTTGACGACCACGTTGCGTTAAATAGTTACTGTTATTATTATTATTACATACGTATGTATTACTACTGTATACTGTAAACACGAAACACACACTTCTGTCTGTCTATTCCTATGTTCGCAACCGATATCACACGAGATATTTGTTA 522 2043245 0.978794256 37 507 3452 0.972580645 2.081347308 0.022580645 0.155172414 0.288709677 522 13 4 603 2L:2043182-2043412 6 Su(dx) FBtr0077824|FBtr0334778|FBtr0077823|FBtr0077822|FBtr0339529 2043182|2043182|2043182|2043182|2043182 2044372|2043677|2044372|2044372|2043677 CCGTCC 6mer2-7 dme-miR-184-3p 2L + 2043182 2043269 stop_codon Su(dx) FlyBase G903.2 GAGTGGCAGTCGATTTGTGGTCGGTTTGTTGATTAATGTTTAATTCCAGTTAAGCGCCTGCTTTACCGTCCCCTCCCCCTTTCCATTT 243 2043245 0.697044065 14 232 1494 0.943243243 1.940765436 0.008108108 0.386831276 0.597297297 243 18 3 349 2L:2043182-2043269 6 337.5 359 FBgn0003557 1814.713333 49.05333333 75.26666667 0.185979787 6.880266377 4.484056687 2 2 2 0.15 dme-miR-283-5p 8mer-m1 TGATATTT 2L 2043558 2043565 + 2L_2043558_2043565_+ 0.553165661 0.555593792 0.554379726 0.001716926 Su(dx) FBtr0339529|FBtr0077823|FBtr0077822|FBtr0077824|FBtr0334778 2043182|2043182|2043182|2043182|2043182 2043677|2044372|2044372|2044372|2043677 2L + 2043486 2043576 3'utr Su(dx) FlyBase G1148.1 TTAGGCATAATTTATCCACTGCATAACTCTCCTGTGTAAATTTAAGACAAAGTTTGATTGATTCGCTTCTGTTGATATTTCTTACGACCAT 50 2043552 0.729324422 15 47 489 0.926470588 1.799340549 0.132352941 0.28 0.470588235 50 5 0 63 2L:2043486-2043576 8 Su(dx) FBtr0077824|FBtr0334778|FBtr0077823|FBtr0077822|FBtr0339529 2043182|2043182|2043182|2043182|2043182 2044372|2043677|2044372|2044372|2043677 TGATATTT 8mer-m1 dme-miR-283-5p 2L + 2043488 2043568 3'utr Su(dx) FlyBase G904.1 AGGCATAATTTATCCACTGCATAACTCTCCTGTGTAAATTTAAGACAAAGTTTGATTGATTCGCTTCTGTTGATATTTCTT 28 2043552 0.98874498 14 28 259 1 1.643452676 0.068181818 0.428571429 0.636363636 28 0 0 44 2L:2043488-2043568 8 19 360 FBgn0003557 1814.713333 49.05333333 75.26666667 0.010469973 0.387333515 0.252435784 6 6 6 0.15 dme-miR-34-5p 8mer-A1 CACTGCCA 2L 20443000 20443007 + 2L_20443000_20443007_+ 0.376081848 0.441767478 0.408924663 0.046446804 CG31688 FBtr0330661|FBtr0330203|FBtr0330204|FBtr0308895|FBtr0273378 20441856|20441889|20441889|20441856|20441856 20447905|20443944|20443944|20444823|20443944 2L + 20442982 20443028 3'utr CG31688 FlyBase G5593.1 CTTTGCCGCCACATACCGCACTGCCATGGTCGAGAGCAGCTCGCACG 21 20443008 0.887047371 2 19 56 0.956521739 1.342422681 0.130434783 0.095238095 0.173913043 21 1 0 22 2L:20442982-20443028 8 CG31688 FBtr0308895|FBtr0330204|FBtr0330203|FBtr0330661|FBtr0273378 20441856|20441889|20441889|20441856|20441856 20444823|20443944|20443944|20447905|20443944 CACTGCCA 8mer-A1 dme-miR-34-5p 2L + 20442985 20443024 3'utr CG31688 FlyBase G4348.1 TGCCGCCACATACCGCACTGCCATGGTCGAGAGCAGCTCG 9 20443008 0.898508352 2 8 27 0.8 1.079181246 0.2 0.555555556 0.733333333 9 3 0 12 2L:20442985-20443024 8 14.5 361 FBgn0263355 715.8866667 19.27333333 29.67 0.020254603 0.752334832 0.488709134 -8 -8 -8 0.15 dme-miR-92b-3p 6mer2-7 TGCAAT 2L 2044324 2044329 + 2L_2044324_2044329_+ 0.75899873 0.733022804 0.746010767 0.018367735 Su(dx) FBtr0077823|FBtr0077822|FBtr0077824 2043182|2043182|2043182 2044372|2044372|2044372 2L + 2044298 2044382 3'utr Su(dx) FlyBase G1151.1 TATTAAATAGATTTTATTTAGTTTAATGCAATGTGTACTGTATTATATAAAATAAATGCAAAATTATTTAGTGATACACGGCCGA 23 2044331 0.976351797 11 20 237 0.928571429 1.414973348 0.285714286 0.217391304 0.357142857 23 2 0 26 2L:2044298-2044382 6 Su(dx) FBtr0077824|FBtr0077823|FBtr0077822 2043182|2043182|2043182 2044372|2044372|2044372 TGCAAT 6mer2-7 dme-miR-92b-3p 2L + 2044313 2044355 3'utr Su(dx) FlyBase G905.1 ATTTAGTTTAATGCAATGTGTACTGTATTATATAAAATAAATG 14 2044330 0.74261912 7 12 150 0.913043478 1.322219295 0.173913043 0.571428571 0.739130435 14 2 0 21 2L:2044313-2044355 6 15 362 FBgn0003557 1814.713333 49.05333333 75.26666667 0.008265768 0.305789617 0.199291408 -7 -6 -6.5 0.15 dme-miR-34-5p 7mer-A1 ACTGCCA 2L 20647246 20647252 + 2L_20647246_20647252_+ 0.725833991 0.707870517 0.716852254 0.012702113 CG2608 FBtr0081384 20646861 20647381 2L + 20647182 20647267 3'utr CG2608 FlyBase G5619.1 TGACAGCCTTGTATCGAGTGAGATTAGTTTTGTTGATTCAGATTAGTCACATGAAAGGTCTCTGACTGCCATGTAAATCATAAGTA 14 20647244 0.984343313 6 12 101 0.882352941 0.875061263 0.176470588 0.214285714 0.352941176 14 1 1 15 2L:20647182-20647267 7 CG2608 FBtr0081384 20646861 20647381 ACTGCCA 7mer-A1 dme-miR-34-5p 2L + 20647221 20647268 3'utr CG2608 FlyBase G4365.1 AGATTAGTCACATGAAAGGTCTCTGACTGCCATGTAAATCATAAGTAA 9 20647253 0.956937515 4 9 57 1 1.230448921 0.235294118 0.777777778 0.882352941 9 0 0 17 2L:20647221-20647268 7 9 363 FBgn0032870 618.86 51.52 79.05666667 0.014542869 0.174689441 0.113842392 2 -7 -2.5 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2L 20650744 20650749 + 2L_20650744_20650749_+ 0.883053377 0.943082029 0.913067703 0.04244663 CG2611 FBtr0081387 20650724 20650898 2L + 20650736 20650765 3'utr CG2611 FlyBase G5625.1 CCAAAGACACCAAATGTTTCGTCAAATAGA 8 20650750 0.971450825 3 7 40 0.9 0.954242509 0 0.25 0.4 8 1 0 9 2L:20650736-20650765 6 CG2611 FBtr0081387 20650724 20650898 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L + 20650738 20650768 3'utr CG2611 FlyBase G4371.1 AAAGACACCAAATGTTTCGTCAAATAGAGTT 6 20650752 0.967652711 3 5 33 1 1 0 0.5 0.7 6 0 0 10 2L:20650738-20650768 6 6.5 364 FBgn0032871 63.36 12.95666667 19.59 0.102588384 0.501672241 0.33180194 -6 -8 -7 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 2L 20730913 20730919 - 2L_20730913_20730919_- 0.518091325 0.518541405 0.518316365 0.000318269 CG9318 FBtr0081393|FBtr0335149 20730643|20730414 20730999|20730999 2L - 20730809 20730974 3'utr CG9318 FlyBase G12008.1 TGCGAATGTATTTTTGTATGTGTAGCCACAAATTTACACTTAAGCCTAATGTGTGTGTGATTTCTGCGCTGTGCGCCCGGCACAGACAGTTTTCTGTTTACTATAATTACGATTGATATGTGTATAATAACATATGTTTGTATCAGGCAAGGAACAGTGGAGTAAC 93 20730913 0.985962272 25 92 775 0.990740741 2.029383778 0.231481481 0.139784946 0.259259259 93 1 0 107 2L:20730809-20730974 7 CG9318 FBtr0081393|FBtr0335149 20730643|20730414 20730999|20730999 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 20730886 20730957 3'utr CG9318 FlyBase G9212.1 ATGTGTAGCCACAAATTTACACTTAAGCCTAATGTGTGTGTGATTTCTGCGCTGTGCGCCCGGCACAGACAG 67 20730913 0.987733209 12 65 588 0.962264151 2.008600172 0.160377358 0.432835821 0.641509434 67 4 0 102 2L:20730886-20730957 7 65 365 FBgn0032880 1856.426667 79.74 121.9 0.035013503 0.815149235 0.533223954 -6 -6 -6 0.15 dme-miR-278-3p 6mer3-8 CCCACC 2L 20738935 20738940 + 2L_20738935_20738940_+ 0.983059148 0.994178858 0.988619003 0.007862886 Fs(2)Ket FBtr0305587|FBtr0305586|FBtr0305585|FBtr0081392|FBtr0305584 20738901|20738901|20738901|20738901|20738901 20750941|20750941|20750941|20739764|20739764 2L + 20738895 20738969 stop_codon Fs(2)Ket FlyBase G5668.1 CGCAGTAGGCCACCTGCTAGAGGTTAATGTTTCTTCGCTTCCCACCAGACCCTCAAGATTGTGTGTAATGCAGTG 34 20738953 0.920342401 8 33 254 0.975609756 1.602059991 0.463414634 0.176470588 0.317073171 34 1 0 40 2L:20738895-20738969 6 Fs(2)Ket FBtr0305584|FBtr0081392|FBtr0305585|FBtr0305586|FBtr0305587 20738901|20738901|20738901|20738901|20738901 20739764|20739764|20750941|20750941|20750941 CCCACC 6mer3-8 dme-miR-278-3p 2L + 20738908 20738973 3'utr Fs(2)Ket FlyBase G4399.1 CTGCTAGAGGTTAATGTTTCTTCGCTTCCCACCAGACCCTCAAGATTGTGTGTAATGCAGTGAAAG 24 20738953 0.757483815 6 23 158 0.96969697 1.505149978 0.121212121 0.291666667 0.484848485 24 1 0 32 2L:20738908-20738973 6 19 366 FBgn0262743 4510.123333 82.11666667 125.5566667 0.004212745 0.231378121 0.151326094 -18 -18 -18 0.15 dme-miR-995-5p 6mer3-8 AATTCG 2L 20739317 20739322 + 2L_20739317_20739322_+ 0.958429807 0.967398441 0.962914124 0.006341758 Fs(2)Ket FBtr0305586|FBtr0305585|FBtr0081392|FBtr0305584 20738901|20738901|20738901|20738901 20750941|20750941|20739764|20739764 2L + 20739230 20739343 3'utr Fs(2)Ket FlyBase G5669.1 AAGTTTGTCCGATCTATTGTTGCTGTGCAACTTCTAAATGCTAAGACCACTTGTTTATAAAACTCCCTACCCACTAGCTGTAAGTTCAATTCGATCCACTGTTTCGACTCAATA 21 20739319 0.990909227 14 18 182 0.88 0.865301426 0.08 0.142857143 0.28 21 1 2 22 2L:20739230-20739343 6 Fs(2)Ket FBtr0305584|FBtr0081392|FBtr0305585|FBtr0305586 20738901|20738901|20738901|20738901 20739764|20739764|20750941|20750941 AATTCG 6mer3-8 dme-miR-995-5p 2L + 20739290 20739361 3'utr Fs(2)Ket FlyBase G4400.1 AACTCCCTACCCACTAGCTGTAAGTTCAATTCGATCCACTGTTTCGACTCAATATTTTAATTAAGGTCTGTT 11 20739332 0.991514087 6 10 112 0.928571429 1.113943352 0.285714286 0.272727273 0.428571429 11 1 0 13 2L:20739290-20739361 6 9.5 367 FBgn0262743 4510.123333 82.11666667 125.5566667 0.002106373 0.11568906 0.075663047 -2 -15 -8.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 20740044 20740050 + 2L_20740044_20740050_+ 0.770346339 0.765679133 0.768012736 0.003300209 Fs(2)Ket FBtr0305586|FBtr0305586|FBtr0305586|FBtr0305585|FBtr0305585|FBtr0305585 20738901|20738901|20738901|20738901|20738901|20738901 20750941|20750941|20750941|20750941|20750941|20750941 2L + 20739947 20740111 5'utr-coding Fs(2)Ket FlyBase G5673.1 TATGTACGTGGTATTTTGATTGCGACAAACCCCCGAAATGTTTGGAAACGGATGAGGATTCCCCCTTTCTGTGGCGCGCGTGTGCATCGGCGTGTTGTGTGATATTATGGATTAAGCGTAAGAACTTTTCTAGTGAAACGAATGATTTTAGACCTAAGCAAAACC 244 20740042 0.777988656 33 226 1966 0.929078014 2.117271296 0.460992908 0.118852459 0.237588652 244 19 1 262 2L:20739947-20740111 7 Fs(2)Ket FBtr0305585|FBtr0305585|FBtr0305585|FBtr0305586|FBtr0305586|FBtr0305586 20738901|20738901|20738901|20738901|20738901|20738901 20750941|20750941|20750941|20750941|20750941|20750941 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 20739895 20740106 5'utr-coding Fs(2)Ket FlyBase G4403.2 TACCCCTATGCCAATAGTTATGCTGTGATGGATGCTTGAGAGGAACTATGTCTATGTACGTGGTATTTTGATTGCGACAAACCCCCGAAATGTTTGGAAACGGATGAGGATTCCCCCTTTCTGTGGCGCGCGTGTGCATCGGCGTGTTGTGTGATATTATGGATTAAGCGTAAGAACTTTTCTAGTGAAACGAATGATTTTAGACCTAAGCA 159 20740042 0.986032248 32 146 1331 0.927419355 1.759667845 0.584677419 0.408805031 0.620967742 159 15 3 230 2L:20739895-20740106 7 114.5 368 FBgn0262743 4510.123333 82.11666667 125.5566667 0.025387332 1.394357621 0.911938832 2 2 2 0.15 dme-miR-932-5p 6mer3-8 GGAATT 2L 20749193 20749198 + 2L_20749193_20749198_+ 0.591719816 0.59172071 0.591720263 6.36E-07 Fs(2)Ket FBtr0305586 20738901 20750941 2L + 20749151 20749217 3'utr Fs(2)Ket FlyBase G5679.1 AAGGGAACATTTGTTTTATCAGATTCGAACATATCAGAAATTGGAATTTGAAATGGCAACTTGGAGC 6 20749196 0.974645763 5 6 42 1 0.903089987 0.625 0.166666667 0.375 6 0 0 8 2L:20749151-20749217 6 Fs(2)Ket FBtr0305586 20738901 20750941 GGAATT 6mer3-8 dme-miR-932-5p 2L + 20749160 20749224 3'utr Fs(2)Ket FlyBase G4410.1 TTTGTTTTATCAGATTCGAACATATCAGAAATTGGAATTTGAAATGGCAACTTGGAGCACTTGAT 5 20749192 0.988272988 4 4 41 0.8 0.903089987 0.5 0.8 0.9 5 2 0 8 2L:20749160-20749224 6 4 369 FBgn0262743 4510.123333 82.11666667 125.5566667 0.000886894 0.048711183 0.031858125 -3 1 -1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 20749805 20749810 + 2L_20749805_20749810_+ 0.999900139 0.999986373 0.999943256 6.10E-05 Fs(2)Ket FBtr0305587|FBtr0305587|FBtr0305587|FBtr0305586|FBtr0305586|FBtr0305586|FBtr0305585|FBtr0305585|FBtr0305585 20738901|20738901|20738901|20738901|20738901|20738901|20738901|20738901|20738901 20750941|20750941|20750941|20750941|20750941|20750941|20750941|20750941|20750941 2L + 20749786 20749818 3'utr Fs(2)Ket FlyBase G5682.1 AAGAGTAGTGTGTTTGGAACTGTGACTGAGTAA 8 20749807 0.708485111 4 7 57 0.909090909 1 0 0.25 0.454545455 8 1 0 10 2L:20749786-20749818 6 Fs(2)Ket FBtr0305585|FBtr0305585|FBtr0305585|FBtr0305586|FBtr0305586|FBtr0305586|FBtr0305587|FBtr0305587|FBtr0305587 20738901|20738901|20738901|20738901|20738901|20738901|20738901|20738901|20738901 20750941|20750941|20750941|20750941|20750941|20750941|20750941|20750941|20750941 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 20749795 20749824 3'utr Fs(2)Ket FlyBase G4414.1 GTGTTTGGAACTGTGACTGAGTAAATTTGT 8 20749801 0.630032987 5 8 55 1 1 0 0.25 0.4 8 0 0 10 2L:20749795-20749824 6 8 370 FBgn0262743 4510.123333 82.11666667 125.5566667 0.001773787 0.097422367 0.06371625 -2 4 1 0.15 dme-miR-308-3p 8mer-m1 CTGTGATT 2L 20750127 20750134 + 2L_20750127_20750134_+ 0.385469305 0.385506645 0.385487975 2.64E-05 Fs(2)Ket FBtr0305587|FBtr0305586|FBtr0305585 20738901|20738901|20738901 20750941|20750941|20750941 2L + 20750104 20750186 3'utr Fs(2)Ket FlyBase G5683.1 TAAAAACACAACTGTAACATTGCCTGTGATTCATTCGATCATCTGTGTGTGGAGTGTACGCTGTGTGAAAGACTTGTGTGGAT 58 20750124 0.98960313 8 51 500 0.848484848 1.271066772 0.03030303 0.120689655 0.227272727 58 8 2 56 2L:20750104-20750186 8 Fs(2)Ket FBtr0305585|FBtr0305586|FBtr0305587 20738901|20738901|20738901 20750941|20750941|20750941 CTGTGATT 8mer-m1 dme-miR-308-3p 2L + 20750108 20750145 3'utr Fs(2)Ket FlyBase G4416.1 AACACAACTGTAACATTGCCTGTGATTCATTCGATCAT 31 20750124 0.774842722 7 29 254 0.9375 1.653212514 0.0625 0.483870968 0.666666667 31 3 0 45 2L:20750108-20750145 8 43.5 371 FBgn0262743 4510.123333 82.11666667 125.5566667 0.009644969 0.529734118 0.346457111 3 3 3 0.15 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 2L 20788624 20788629 + 2L_20788624_20788629_+ 0.999582084 0.999970653 0.999776369 0.000274782 Pomp FBtr0081414 20788537 20789098 2L + 20788551 20788666 3'utr Pomp FlyBase G5710.1 GAAGTTGCTAAATGCCTGGCATTCAGCCTTTAAACTCTAAGACACTCTTAAGATCAGCAAATAAAATATATTTTGGTGCGACCAGCTAGAGGTAAACAAAATTCACCATTTCTTTG 42 20788623 0.706173228 19 39 254 0.886792453 1.070037867 0.113207547 0.238095238 0.396226415 42 3 3 47 2L:20788551-20788666 6 Pomp FBtr0081414 20788537 20789098 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 2L + 20788550 20788644 3'utr Pomp FlyBase G4437.1 TGAAGTTGCTAAATGCCTGGCATTCAGCCTTTAAACTCTAAGACACTCTTAAGATCAGCAAATAAAATATATTTTGGTGCGACCAGCTAGAGGTA 21 20788624 0.776688047 8 20 118 0.967741935 1.176091259 0.258064516 0.428571429 0.612903226 21 0 1 30 2L:20788550-20788644 6 13.5 372 FBgn0032884 886.4133333 100.35 153.2666667 0.015229915 0.134529148 0.088081775 1 0 0.5 0.15 dme-miR-31a-5p 6mer3-8 TCTTGC 2L 20813959 20813964 + 2L_20813959_20813964_+ 0.99327044 0.927529534 0.960399987 0.046485836 CG9328 FBtr0081416 20813711 20814331 2L + 20813656 20814022 stop_codon CG9328 FlyBase G5718.1 AATCCCGAGTATCTGAACGTGCGGGCCAAGCTGCGCACGGCGCACGCCAACAATTAAGGAGCAGCCCACTCGGATACCCCTCATCCTGTAATCCTCAGCCTATTTAATGTTTAGTTTTAGTAAGAGACCTAACCAAATTATGTGTAAGGAAACCATGTGTTTTATATGTTAACTTTGTGAGCGGTTTTCATTTTGATATTATGCAAAACTAGAGTTGATTATTATAATTAAAAATGTACACCTAGACTAAGCCATTTACTTGTTTAGTTTGTTAGTCCTTATCTCTAATCTAAGTTGAAGCTTTCTTGCGCTAAATTCGTTGTGTATAAACCAAGTGTATAAAGTTTTAGTTTCTAAAAGGACCCCA 257 20813961 0.987709092 60 244 2185 0.950331126 1.980760642 0.086092715 0.147859922 0.274834437 257 13 2 287 2L:20813656-20814022 6 CG9328 FBtr0081415|FBtr0081416 20813711|20813711 20814030|20814331 TCTTGC 6mer3-8 dme-miR-31a-5p 2L + 20813915 20813988 5'utr CG9328 FlyBase G4443.1 TTGTTTAGTTTGTTAGTCCTTATCTCTAATCTAAGTTGAAGCTTTCTTGCGCTAAATTCGTTGTGTATAAACCA 51 20813961 0.706274107 9 50 466 1 1.77815125 0.166666667 0.18 0.316666667 50 0 0 60 2L:20813915-20813988 6 56 373 FBgn0032886 2087.65 162.9466667 249.96 0.02682442 0.343670731 0.224035846 -2 -2 -2 0.15 dme-miR-932-5p 6mer2-7 GAATTG 2L 20871824 20871829 - 2L_20871824_20871829_- 0.997404911 0.996375152 0.996890031 0.000728108 sky FBtr0081443|FBtr0330257|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081447|FBtr0081444|FBtr0330256|FBtr0081441|FBtr0081442|FBtr0081446 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 2L - 20871789 20871845 3'utr sky FlyBase G12037.1 AAATTGTTTTCTATCTGAATTGTTCTCAATGTGTAGTTTATATACAATATCTTGATA 58 20871826 0.98340103 9 57 639 0.987179487 1.886490725 0.115384615 0.293103448 0.474358974 58 1 0 77 2L:20871789-20871845 6 sky FBtr0081442|FBtr0081447|FBtr0081446|FBtr0330256|FBtr0081444|FBtr0081441|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081443|FBtr0330257 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 GAATTG 6mer2-7 dme-miR-932-5p 2L - 20871786 20871840 3'utr sky FlyBase G9231.1 GTTTTCTATCTGAATTGTTCTCAATGTGTAGTTTATATACAATATCTTGATAAAT 34 20871826 0.990208216 6 34 344 1 1.755874856 0.105263158 0.411764706 0.649122807 34 0 0 57 2L:20871786-20871840 6 43 374 FBgn0032901 1773.08 43.72 66.94 0.024251585 0.983531565 0.642366298 -3 -3 -3 0.15 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 20872586 20872593 - 2L_20872586_20872593_- 0.631125603 0.631130917 0.63112826 3.75E-06 sky FBtr0081443|FBtr0330257|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081447|FBtr0081444|FBtr0330256|FBtr0081441|FBtr0081442|FBtr0081446 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 2L - 20872530 20872667 3'utr sky FlyBase G12041.1 ATTTTCAATACCAACGAAATTCTTTGCTCACCTCCACCTAAAAACTGCACGTACACAAAATTTTTGCACACTTTTCTAGTCAATTTTTATGTTTTACAAAAATAACATGGTGTGTCTCCTCCCATTTCCCTCTGGACG 186 20872594 0.914851519 22 176 1855 0.948717949 1.86923172 0.11965812 0.188172043 0.354700855 186 10 2 222 2L:20872530-20872667 8 sky FBtr0081442|FBtr0081447|FBtr0081446|FBtr0330256|FBtr0081444|FBtr0081441|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081443|FBtr0330257 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 20872526 20872625 3'utr sky FlyBase G9235.1 AACTGCACGTACACAAAATTTTTGCACACTTTTCTAGTCAATTTTTATGTTTTACAAAAATAACATGGTGTGTCTCCTCCCATTTCCCTCTGGACGAACA 138 20872594 0.990473723 17 133 1362 0.974358974 2.278753601 0.082051282 0.297101449 0.502564103 138 5 0 190 2L:20872526-20872625 8 141.5 375 FBgn0032901 1773.08 43.72 66.94 0.079804634 3.236505032 2.113833284 1 1 1 0.15 dme-bantam-3p 8mer-A1 TGATCTCA 2L 20872779 20872786 - 2L_20872779_20872786_- 0.615508322 0.614696039 0.61510218 0.000574383 sky FBtr0081443|FBtr0330257|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081447|FBtr0081444|FBtr0330256|FBtr0081441|FBtr0081442|FBtr0081446 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 2L - 20872764 20872844 3'utr sky FlyBase G12043.1 AAATAAGTTGAAGGAACGATTGGGCAGTGGAGAGCTGCCATGTGCCACCATGTGCAATTGATCTCAAAACGAAAAACGAAA 1074 20872787 0.830645749 11 1049 5578 0.979405034 1.932473765 0.439359268 0.175977654 0.324942792 1074 13 14 1284 2L:20872764-20872844 8 sky FBtr0081442|FBtr0081447|FBtr0081446|FBtr0330256|FBtr0081444|FBtr0081441|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081443|FBtr0330257 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 TGATCTCA 8mer-A1 dme-bantam-3p 2L - 20872766 20872872 3'utr sky FlyBase G9236.1 GCGGAATTTGTAGTCGGTTCAAAGTCCAAAATAAGTTGAAGGAACGATTGGGCAGTGGAGAGCTGCCATGTGCCACCATGTGCAATTGATCTCAAAACGAAAAACGA 647 20872787 0.963957029 13 634 3280 0.97718254 2.090346244 0.446428571 0.404945904 0.618055556 647 16 7 985 2L:20872766-20872872 8 842 376 FBgn0032901 1773.08 43.72 66.94 0.47487987 19.2589204 12.57842844 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 20873435 20873440 - 2L_20873435_20873440_- 0.577276762 0.755256694 0.666266728 0.125850794 sky FBtr0081443|FBtr0081443|FBtr0081443|FBtr0330257|FBtr0330257|FBtr0330257|FBtr0301961|FBtr0301961|FBtr0301961|FBtr0330255|FBtr0330255|FBtr0330255|FBtr0081440|FBtr0081440|FBtr0081440|FBtr0081445|FBtr0081445|FBtr0081445|FBtr0081447|FBtr0081447|FBtr0081447|FBtr0081444|FBtr0081444|FBtr0081444|FBtr0330256|FBtr0330256|FBtr0330256|FBtr0081441|FBtr0081441|FBtr0081441|FBtr0081442|FBtr0081442|FBtr0081442|FBtr0081446|FBtr0081446|FBtr0081446 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20872993|20872993|20872993|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 2L - 20873407 20873569 3'utr sky FlyBase G12049.1 AAGCTTATTTATAAAAATGTATCGAAAGTGGCCAAGCAGCAGTAAATGCTGCCGTCGTCGTGTTAATGTTAAATGTTAATGAAAAAATGCAAAGCTAAAACAAATTATATATTATATAATGGAAATACTCTGTGAGTTCATGTTTCAAAACGCAAAGCTTTGA 76 20873433 0.988552082 15 67 538 0.869047619 1.562292864 0.083333333 0.105263158 0.19047619 76 10 1 73 2L:20873407-20873569 6 sky FBtr0081442|FBtr0081442|FBtr0081442|FBtr0081447|FBtr0081447|FBtr0081447|FBtr0081446|FBtr0081446|FBtr0081446|FBtr0330256|FBtr0330256|FBtr0330256|FBtr0081444|FBtr0081444|FBtr0081444|FBtr0081441|FBtr0081441|FBtr0081441|FBtr0301961|FBtr0301961|FBtr0301961|FBtr0330255|FBtr0330255|FBtr0330255|FBtr0081440|FBtr0081440|FBtr0081440|FBtr0081445|FBtr0081445|FBtr0081445|FBtr0081443|FBtr0081443|FBtr0081443|FBtr0330257|FBtr0330257|FBtr0330257 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20872993|20872993|20872993|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 20873335 20873459 3'utr sky FlyBase G9240.1 ATTATATAATGGAAATACTCTGTGAGTTCATGTTTCAAAACGCAAAGCTTTGAAATTACAATACCCTAGTTGTTATAACCCCTTTACATACGTATATACATGATATCTATACAAACAAGTATATA 50 20873433 0.98032649 14 47 335 0.956521739 1.51851394 0.144927536 0.3 0.492753623 50 2 1 66 2L:20873335-20873459 6 47.5 377 FBgn0032901 1773.08 43.72 66.94 0.026789541 1.086459286 0.709590678 -7 -7 -7 0.15 dme-miR-283-5p 6mer2-7 GATATT 2L 20873720 20873725 - 2L_20873720_20873725_- 0.976821835 0.999999863 0.988410849 0.016389392 sky FBtr0081443|FBtr0330257|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081445|FBtr0081447|FBtr0081444|FBtr0330256|FBtr0081441|FBtr0081442|FBtr0081446 20871333|20871333|20871333|20871333|20871333|20872993|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 2L - 20873676 20873778 stop_codon sky FlyBase G12050.1 CTGGAAGTCTACGGATTCGTGGGCATCTAAAAACCTTCTTTCTTAGTCTGACCGATATTGCCCGCCGATGATCAAGTGCTCAGCAAAACTGCTCGACGTTCCC 25 20873736 0.978455624 13 25 169 1 1.505149978 0.03125 0.24 0.40625 25 0 0 32 2L:20873676-20873778 6 sky FBtr0081442|FBtr0081447|FBtr0081446|FBtr0330256|FBtr0081444|FBtr0081441|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081445|FBtr0081443|FBtr0330257 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20872993|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 GATATT 6mer2-7 dme-miR-283-5p 2L - 20873674 20873748 3'utr sky FlyBase G9243.1 AAACCTTCTTTCTTAGTCTGACCGATATTGCCCGCCGATGATCAAGTGCTCAGCAAAACTGCTCGACGTTCCCCC 13 20873735 0.830357217 8 12 70 0.952380952 1.301029996 0.19047619 0.384615385 0.619047619 13 1 0 20 2L:20873674-20873748 6 14.5 378 FBgn0032901 1773.08 43.72 66.94 0.00817786 0.331655993 0.216611891 11 10 10.5 0.15 dme-miR-304-5p 7mer-A1 GAGATTA 2L 20919169 20919175 - 2L_20919169_20919175_- 0.443191942 0.43109601 0.437143976 0.008553093 Mtp FBtr0081439 20919092 20919238 2L - 20919125 20919222 3'utr Mtp FlyBase G12065.1 TATTGGAGATTCCTTGCATAAAAACTATATTTCTATGTGAAAACTCAGAGATTAAGACTCGATATAGTTGTAAACTTAAACGAACAAAGACCATTTAA 50 20919171 0.982220912 9 46 337 0.93220339 1.439332694 0.271186441 0.18 0.305084746 50 3 1 55 2L:20919125-20919222 7 Mtp FBtr0081439 20919092 20919238 GAGATTA 7mer-A1 dme-miR-304-5p 2L - 20919131 20919198 3'utr Mtp FlyBase G9252.1 CTATATTTCTATGTGAAAACTCAGAGATTAAGACTCGATATAGTTGTAAACTTAAACGAACAAAGACC 22 20919171 0.977658197 5 21 141 0.965517241 1.447158031 0.413793103 0.272727273 0.448275862 22 1 0 28 2L:20919131-20919198 7 32.5 379 FBgn0266369 334.6733333 13.78 21.06333333 0.097109619 2.358490566 1.542965659 -4 -4 -4 0.15 dme-miR-184-3p 7mer-m8 TCCGTCC 2L 20965583 20965589 - 2L_20965583_20965589_- 0.655201738 0.656314789 0.655758263 0.000787081 CG42238 FBtr0290305|FBtr0331200|FBtr0331199|FBtr0290306 20965518|20965518|20965518|20965518 20967385|20967385|20967385|20967385 2L - 20965555 20965607 3'utr CG42238 FlyBase G12079.1 TACAAATTATTAACTGATTCCGTCCGCACCCTGACAACTGTGTTAACTAACTT 444 20965590 0.741900509 9 440 2489 0.99255121 2.425697213 0.009310987 0.177927928 0.320297952 444 3 1 533 2L:20965555-20965607 7 CG42238 FBtr0290306|FBtr0331199|FBtr0331200|FBtr0290305 20965518|20965518|20965518|20965518 20967385|20967385|20967385|20967385 TCCGTCC 7mer-m8 dme-miR-184-3p 2L - 20965549 20965606 3'utr CG42238 FlyBase G9257.1 ACAAATTATTAACTGATTCCGTCCGCACCCTGACAACTGTGTTAACTAACTTTAAGAT 230 20965590 0.963040554 7 227 1277 0.983651226 2.557507202 0 0.386956522 0.615803815 230 6 0 361 2L:20965549-20965606 7 335.5 380 FBgn0250867 324.93 11.38 17.49333333 1.032530083 29.48154657 19.17873476 1 1 1 0.15 dme-miR-14-3p 6mer2-7 AGACTG 2L 20965825 20965830 - 2L_20965825_20965830_- 0.999360909 0.999992134 0.999676521 0.000446326 CG42238 FBtr0290305|FBtr0331200|FBtr0331199|FBtr0290306 20965518|20965518|20965518|20965518 20967385|20967385|20967385|20967385 2L - 20965803 20965843 3'utr CG42238 FlyBase G12080.1 TCAAATCGCCTATAGACTGTAGCACTATAGCTAAAAGGTAT 10 20965832 0.955877721 2 10 51 1 1.113943352 0 0.3 0.461538462 10 0 0 13 2L:20965803-20965843 6 CG42238 FBtr0290306|FBtr0331199|FBtr0331200|FBtr0290305 20965518|20965518|20965518|20965518 20967385|20967385|20967385|20967385 AGACTG 6mer2-7 dme-miR-14-3p 2L - 20965811 20965848 3'utr CG42238 FlyBase G9258.1 AAACGTCAAATCGCCTATAGACTGTAGCACTATAGCTA 5 20965831 0.956116811 3 5 26 1 0.84509804 0 0.2 0.428571429 5 0 0 7 2L:20965811-20965848 6 7.5 381 FBgn0250867 324.93 11.38 17.49333333 0.023081895 0.659050967 0.428734756 2 1 1.5 0.15 dme-miR-14-3p 6mer3-8 AAGACT 2L 210153 210158 + 2L_210153_210158_+ 0.968575506 0.718296379 0.843435942 0.176974049 Tbc1d15-17 FBtr0332339|FBtr0332338|FBtr0078125 209857|209857|209857 210725|210506|210506 2L + 210116 210224 3'utr Tbc1d15-17 FlyBase G641.1 GTAAACAAAACATTGGAGCAGTGTTAGCTTAGACTATAAGACTTAAAGTTTACTCTCGCATCGAAGCTAAGCGAGGCGGGCCAAGCGGATACACTGATTTATATATTGT 33 210152 0.979907854 12 32 227 0.972972973 1.255272505 0.135135135 0.121212121 0.216216216 33 0 1 36 2L:210116-210224 6 Tbc1d15-17 FBtr0332338|FBtr0332339|FBtr0078125 209857|209857|209857 210506|210725|210506 AAGACT 6mer3-8 dme-miR-14-3p 2L + 210124 210175 3'utr Tbc1d15-17 FlyBase G513.1 AACATTGGAGCAGTGTTAGCTTAGACTATAAGACTTAAAGTTTACTCTCGCA 14 210151 0.733615063 6 14 96 1 1.301029996 0.2 0.428571429 0.6 14 0 0 20 2L:210124-210175 6 18 382 FBgn0031233 273.62 11.06666667 17.00333333 0.065784665 1.626506024 1.058615958 1 2 1.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 210427 210432 + 2L_210427_210432_+ 0.999240758 0.999999996 0.999620377 0.000536835 Tbc1d15-17 FBtr0332339|FBtr0332339|FBtr0332339|FBtr0332338|FBtr0332338|FBtr0332338|FBtr0078125|FBtr0078125|FBtr0078125 209857|209857|209857|209857|209857|209857|209857|209857|209857 210725|210725|210725|210506|210506|210506|210506|210506|210506 2L + 210410 210448 3'utr Tbc1d15-17 FlyBase G643.1 TTAAGTTTAGTCAATTACTGTGAATATACATCCGTATAC 16 210434 0.732856639 4 12 143 0.705882353 1.079181246 0.058823529 0.0625 0.117647059 16 5 0 12 2L:210410-210448 6 Tbc1d15-17 FBtr0332338|FBtr0332338|FBtr0332338|FBtr0332339|FBtr0332339|FBtr0332339|FBtr0078125|FBtr0078125|FBtr0078125 209857|209857|209857|209857|209857|209857|209857|209857|209857 210506|210506|210506|210725|210725|210725|210506|210506|210506 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 210412 210448 3'utr Tbc1d15-17 FlyBase G517.1 AAGTTTAGTCAATTACTGTGAATATACATCCGTATAC 12 210425 0.676549666 5 11 100 0.9375 1.176091259 0 0.25 0.4375 12 1 0 15 2L:210412-210448 6 14 383 FBgn0031233 273.62 11.06666667 17.00333333 0.05116585 1.265060241 0.823367967 -7 2 -2.5 0.15 dme-miR-34-5p 7mer-A1 ACTGCCA 2L 210572 210578 + 2L_210572_210578_+ 0.821280933 0.809676187 0.81547856 0.008205762 Tbc1d15-17 FBtr0332339 209857 210725 2L + 210555 210593 3'utr Tbc1d15-17 FlyBase G645.1 AATCCATCAAGAACTTGACTGCCATTTGTATTCGGGTGG 5 210569 0.960334428 2 5 35 1 0.77815125 0.666666667 0.2 0.333333333 5 0 0 6 2L:210555-210593 7 Tbc1d15-17 FBtr0332339 209857 210725 ACTGCCA 7mer-A1 dme-miR-34-5p 2L + 210559 210593 3'utr Tbc1d15-17 FlyBase G518.1 CATCAAGAACTTGACTGCCATTTGTATTCGGGTGG 5 210580 0.930714971 2 3 32 0.571428571 0.602059991 0.571428571 0.4 0.571428571 5 3 0 4 2L:210559-210593 7 4.5 384 FBgn0031233 273.62 11.06666667 17.00333333 0.016446166 0.406626506 0.264653989 3 -8 -2.5 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 2L 21103985 21103991 + 2L_21103985_21103991_+ 0.440984343 0.51794773 0.479466037 0.054421342 CG9257 FBtr0081465 21103925 21104321 2L + 21103851 21104023 stop_codon CG9257 FlyBase G5736.2 CTCATCGATCTTGCTACCAGTTTTCATCGCCATCGGGGCCTTTATACCACTGCTGTTCTGCCTCTGCAAGCTGTGATCCCCATCCGTTGCTCACTCAACGCTTTCGCCTGCGTTGGTTTCCTGCTTTGTGATTTTGTGATTTTGATAAAAGACTTAATTATATACTTATCGTT 218 21103991 0.988755642 36 196 2355 0.904411765 1.545837067 0.25 0.178899083 0.341911765 218 20 6 246 2L:21103851-21104023 7 CG9257 FBtr0081465 21103925 21104321 TGTGATT 7mer-m1 dme-miR-308-3p 2L + 21103884 21104029 stop_codon CG9257 FlyBase G4458.1 CGGGGCCTTTATACCACTGCTGTTCTGCCTCTGCAAGCTGTGATCCCCATCCGTTGCTCACTCAACGCTTTCGCCTGCGTTGGTTTCCTGCTTTGTGATTTTGTGATTTTGATAAAAGACTTAATTATATACTTATCGTTTAGTTC 167 21103983 0.879128559 31 159 1852 0.952380952 1.77815125 0.186507937 0.329341317 0.555555556 167 9 3 240 2L:21103884-21104029 7 143 385 FBgn0032916 272.05 21.3 32.82666667 0.525638669 6.713615023 4.35621446 -6 2 -2 0.15 dme-miR-34-5p 7mer-A1 ACTGCCA 2L 21136321 21136327 - 2L_21136321_21136327_- 0.822497763 0.821867361 0.822182562 0.00044576 Dap160 FBtr0333087|FBtr0333086 21135274|21135274 21137095|21137095 2L - 21136307 21136359 3'utr Dap160 FlyBase G12107.1 TGATTTATTGACTAAGTTAAGCGCTTATCTGAACTGCCATAACTGTATTAATT 49 21136330 0.795762379 7 47 358 0.962962963 1.238882089 0.111111111 0.040816327 0.12962963 49 0 2 52 2L:21136307-21136359 7 Dap160 FBtr0333086|FBtr0333087 21135274|21135274 21137095|21137095 ACTGCCA 7mer-A1 dme-miR-34-5p 2L - 21136306 21136352 3'utr Dap160 FlyBase G9277.1 TTGACTAAGTTAAGCGCTTATCTGAACTGCCATAACTGTATTAATTT 43 21136330 0.787847382 6 41 323 1 1.763427994 0.275862069 0.302325581 0.482758621 43 0 0 58 2L:21136306-21136352 7 44 386 FBgn0023388 1725.443333 51.01 78.44666667 0.025500693 0.862575965 0.560890626 3 3 3 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 2L 21137286 21137292 - 2L_21137286_21137292_- 0.521222683 0.521223122 0.521222903 2.83E-07 Dap160 FBtr0081504|FBtr0081503|FBtr0301276 21137129|21137129|21137129 21137476|21137476|21137476 2L - 21137180 21137376 5'utr Dap160 FlyBase G12110.1 AAGTTCTCGCCTATTCTCGCTATTGAAACCCCCACTTTAGTGTTTATTTGTTGCAATATTTCCAAGATGTATCTAATTGTTAATTGTGATTATTTAGTTTTTAGATTTACTCCTAAGCTTATCACTAGCGACCTCTCTATTTTCGCTTAGCTAATTTCTAGTGTTATTTCATTTATGTATTTATTTAGTCGGCATAA 81 21137293 0.995423466 30 71 1049 0.87628866 1.62838893 0.164948454 0.172839506 0.309278351 81 11 1 85 2L:21137180-21137376 7 Dap160 FBtr0301276|FBtr0081503|FBtr0081504 21137129|21137129|21137129 21137476|21137476|21137476 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 21137212 21137320 5'utr Dap160 FlyBase G9278.1 TATTTCCAAGATGTATCTAATTGTTAATTGTGATTATTTAGTTTTTAGATTTACTCCTAAGCTTATCACTAGCGACCTCTCTATTTTCGCTTAGCTAATTTCTAGTGTT 58 21137293 0.995472367 22 53 786 0.928571429 1.414973348 0.130952381 0.362068966 0.55952381 58 4 2 78 2L:21137212-21137320 7 45 387 FBgn0023388 1725.443333 51.01 78.44666667 0.026080254 0.882179965 0.573638141 1 1 1 0.15 dme-miR-276a-3p 7mer-A1 GTTCCTA 2L 21145189 21145195 - 2L_21145189_21145195_- 0.8230378 0.823079823 0.823058812 2.97E-05 del FBtr0333085|FBtr0333084|FBtr0081502 21145135|21145135|21145135 21145298|21145298|21145298 2L - 21145177 21145216 3'utr del FlyBase G12127.1 AAATTAAGTTATCAAATTATTGTTCCTATTTGATTATTAC 47 21145197 0.729575614 9 46 557 0.963636364 1.72427587 0.036363636 0.170212766 0.290909091 47 2 0 53 2L:21145177-21145216 7 del FBtr0333084|FBtr0081502|FBtr0333085 21145135|21145135|21145135 21145298|21145298|21145298 GTTCCTA 7mer-A1 dme-miR-276a-3p 2L - 21145176 21145263 3'utr del FlyBase G9290.1 CTTGACATATATCATAATCTCTTCATTATTGATGCACATAATTGAATAAATTAAGTTATCAAATTATTGTTCCTATTTGATTATTACA 38 21145197 0.910733043 13 38 443 1 1.770852012 0.203389831 0.368421053 0.593220339 38 0 0 59 2L:21145176-21145263 7 39 388 FBgn0086251 92 3.553333333 5.473333333 0.423913043 10.97560976 7.12545676 2 2 2 0.15 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 21160797 21160802 - 2L_21160797_21160802_- 0.999359205 0.999883062 0.999621134 0.000370453 Nbr FBtr0081499 21160634 21161011 2L - 21160764 21160816 3'utr Nbr FlyBase G12152.1 ATCAGAAGGAAACTATGTGACTGCGAGCAGGATATGAAAGAATGAATTTTATT 55 21160801 0.715927094 7 55 225 1 1.785329835 0.213114754 0.109090909 0.196721311 55 0 0 61 2L:21160764-21160816 6 Nbr FBtr0081499 21160634 21161011 ATGTGA 6mer3-8 dme-miR-1003-3p 2L - 21160721 21160825 3'utr Nbr FlyBase G9309.1 ATGTTACAAATCAGAAGGAAACTATGTGACTGCGAGCAGGATATGAAAGAATGAATTTTATTACGTTATGATTTCAAGCTCACTGTATCTCCATACTTTAAATAC 76 21160800 0.756674088 11 74 396 0.975409836 1.774516966 0.172131148 0.434210526 0.647540984 76 2 1 119 2L:21160721-21160825 6 45.5 389 FBgn0032924 175.9366667 9.03 13.69333333 0.25861579 5.03875969 3.32278481 -1 -2 -1.5 0.15 dme-miR-7-5p 6mer2-7 TCTTCC 2L 21172700 21172705 + 2L_21172700_21172705_+ 0.999061283 0.999999795 0.999530539 0.00066362 Acon FBtr0300425|FBtr0346587|FBtr0343871 21172647|21172647|21172647 21173017|21173184|21173185 2L + 21172631 21172761 stop_codon Acon FlyBase G5785.1 AAGGAGCTGGCCCAGTAAATGGTCCTGGACCTACTTAAGACACCCAGTCAAGAAGCCTGATCCCAACCTTCTTCCTGTAGGTGAACACACTCAAATTCACAACGGAAGCAATCGAATTATGGTATTGTTAT 21 21172701 0.967201718 14 19 103 0.964285714 1.431363764 0.071428571 0.285714286 0.464285714 21 1 0 27 2L:21172631-21172761 6 Acon FBtr0081473|FBtr0346587|FBtr0343871|FBtr0300425 21172647|21172647|21172647|21172647 21172895|21173184|21173185|21173017 TCTTCC 6mer2-7 dme-miR-7-5p 2L + 21172668 21172740 3'utr Acon FlyBase G4492.2 AGACACCCAGTCAAGAAGCCTGATCCCAACCTTCTTCCTGTAGGTGAACACACTCAAATTCACAACGGAAGCA 16 21172711 0.965395777 7 11 58 0.681818182 1.176091259 0.136363636 0.375 0.545454545 16 7 0 15 2L:21172668-21172740 6 7 390 FBgn0010100 1510.516667 65.87 100.8933333 0.004634176 0.106269926 0.069380204 -1 -11 -6 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 21212838 21212843 - 2L_21212838_21212843_- 0.908375841 0.916110455 0.912243148 0.005469259 Atg18b FBtr0081487|FBtr0331678 21212691|21212320 21213065|21213065 2L - 21212824 21212868 3'utr Atg18b FlyBase G12188.1 TGGATGTATGTATGTATATAGAAATGTACCTAAAAGAATTTCACA 127 21212844 0.830497384 2 126 624 0.993939394 2.214843848 0.060606061 0.220472441 0.4 127 1 0 164 2L:21212824-21212868 6 Atg18b FBtr0081487|FBtr0331678 21212691|21212320 21213065|21213065 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L - 21212795 21212865 3'utr Atg18b FlyBase G9338.1 ATGTATGTATGTATATAGAAATGTACCTAAAAGAATTTCACATAAAAATCTAGATATTCTTGTGTTAGTTT 83 21212844 0.961400997 4 81 408 0.983870968 2.086359831 0.064516129 0.34939759 0.564516129 83 2 0 122 2L:21212795-21212865 6 103 391 FBgn0032935 177.3333333 8.876666667 13.63666667 0.580827068 11.60345475 7.553165485 1 1 1 0.15 dme-miR-305-3p 6mer3-8 ATGTGC 2L 21231411 21231416 + 2L_21231411_21231416_+ 0.999125084 0.950698958 0.974912021 0.034242424 CG8677 FBtr0346586|FBtr0331677 21231107|21231107 21232059|21231692 2L + 21231401 21231488 3'utr CG8677 FlyBase G5819.2 AGTTCCCTTTATGTGCTGTTACAGTTTAGCTAAATCAAGCATCAACTACTTTTAGTATTTTAATTTAGCTCTATATGATTTGAGCCCT 14 21231412 0.879832397 7 13 137 0.944444444 1.230448921 0.166666667 0.142857143 0.333333333 14 1 0 17 2L:21231401-21231488 6 CG8677 FBtr0346586|FBtr0331677 21231107|21231107 21232059|21231692 ATGTGC 6mer3-8 dme-miR-305-3p 2L + 21231392 21231486 3'utr CG8677 FlyBase G4522.1 ATTTAACTTAGTTCCCTTTATGTGCTGTTACAGTTTAGCTAAATCAAGCATCAACTACTTTTAGTATTTTAATTTAGCTCTATATGATTTGAGCC 16 21231412 0.909646223 7 15 159 0.958333333 1.361727836 0 0.375 0.583333333 16 1 0 23 2L:21231392-21231486 6 5 392 FBgn0026577 1892.863333 25.80333333 39.86666667 0.002641501 0.193773414 0.12541806 -1 -1 -1 0.15 dme-miR-8-3p 6mer2-7 AGTATT 2L 21231454 21231459 + 2L_21231454_21231459_+ 0.999965297 0.998059598 0.999012447 0.001347533 CG8677 FBtr0346586|FBtr0331677 21231107|21231107 21232059|21231692 2L + 21231401 21231488 3'utr CG8677 FlyBase G5819.2 AGTTCCCTTTATGTGCTGTTACAGTTTAGCTAAATCAAGCATCAACTACTTTTAGTATTTTAATTTAGCTCTATATGATTTGAGCCCT 14 21231452 0.879832397 7 13 137 0.944444444 1.230448921 0.166666667 0.142857143 0.333333333 14 1 0 17 2L:21231401-21231488 6 CG8677 FBtr0346586|FBtr0331677 21231107|21231107 21232059|21231692 AGTATT 6mer2-7 dme-miR-8-3p 2L + 21231392 21231486 3'utr CG8677 FlyBase G4522.1 ATTTAACTTAGTTCCCTTTATGTGCTGTTACAGTTTAGCTAAATCAAGCATCAACTACTTTTAGTATTTTAATTTAGCTCTATATGATTTGAGCC 16 21231452 0.909646223 7 15 159 0.958333333 1.361727836 0 0.375 0.583333333 16 1 0 23 2L:21231392-21231486 6 6.5 393 FBgn0026577 1892.863333 25.80333333 39.86666667 0.003433951 0.251905439 0.163043478 2 2 2 0.15 dme-miR-305-3p 7mer-m8 ATGTGCC 2L 21257941 21257947 + 2L_21257941_21257947_+ 0.674341954 0.673181894 0.673761924 0.000820315 Hr39 FBtr0081479|FBtr0081481 21257828|21257828 21259675|21259675 2L + 21257904 21257984 3'utr Hr39 FlyBase G5836.2 TTCTATAGATAAGATCCTTACTGTAAGTTCTGAAAACATGTGCCTAAAAACCAAAGCCACGATAGCAGTCACATCAGGCCC 21 21257942 0.906102357 8 19 101 0.913043478 1.322219295 0 0.095238095 0.173913043 21 2 0 21 2L:21257904-21257984 7 Hr39 FBtr0081480|FBtr0081481|FBtr0081479 21257828|21257828|21257828 21258196|21259675|21259675 ATGTGCC 7mer-m8 dme-miR-305-3p 2L + 21257914 21257972 3'utr Hr39 FlyBase G4533.1 AAGATCCTTACTGTAAGTTCTGAAAACATGTGCCTAAAAACCAAAGCCACGATAGCAGT 8 21257942 0.938136675 3 8 36 1 1.041392685 0 0.375 0.545454545 8 0 0 11 2L:21257914-21257972 7 10 394 FBgn0261239 651.04 19.10333333 29.40333333 0.015360039 0.523468854 0.340097495 -1 -1 -1 0.15 dme-miR-33-5p 8mer-A1 CAATGCAA 2L 21259641 21259648 + 2L_21259641_21259648_+ 0.610918015 0.59302529 0.601971652 0.01265205 Hr39 FBtr0081479|FBtr0081481 21257828|21257828 21259675|21259675 2L + 21259575 21259663 3'utr Hr39 FlyBase G5842.1 AAAACTCAATTTTGCTTTTAAATAAATTTAATAAGTAAAATTCAACAATAATTGATATACAATTGTCAATGCAATATTTTGTAATAAAA 13 21259640 0.991411029 3 13 135 1 1.146128036 0.142857143 0.076923077 0.142857143 13 0 0 14 2L:21259575-21259663 8 Hr39 FBtr0081481|FBtr0081479 21257828|21257828 21259675|21259675 CAATGCAA 8mer-A1 dme-miR-33-5p 2L + 21259624 21259664 3'utr Hr39 FlyBase G4537.1 AATTGATATACAATTGTCAATGCAATATTTTGTAATAAAAA 10 21259640 0.821326769 2 10 88 1 1.113943352 0 0.3 0.461538462 10 0 0 13 2L:21259624-21259664 8 10 395 FBgn0261239 651.04 19.10333333 29.40333333 0.015360039 0.523468854 0.340097495 1 1 1 0.15 dme-miR-965-3p 6mer3-8 TACGCT 2L 21281651 21281656 + 2L_21281651_21281656_+ 0.946654521 0.92824005 0.937447285 0.013021018 CG8671 FBtr0330680|FBtr0081484|FBtr0330678|FBtr0114602|FBtr0346464|FBtr0081483|FBtr0330679 21281513|21281513|21281513|21281513|21281513|21281513|21281513 21282037|21282037|21282514|21282037|21282790|21282037|21282514 2L + 21281411 21281713 stop_codon CG8671 FlyBase G5870.1 TGTACATCGCTCGCGATGGAACCGCCTCCCTGGGCGGACATGAGGTTAAATCAAGCGTACGAGCGGGCGCCCTAAAGCAGGTGGTAATGCAGGATAGAAGATAGTAGTATCCGAGACTCACAACTCCTTTTTAAAATTAATTAGAAGACTTATTGATCAATTAAAATGGAGTATTGAACTAAAAGAAATAGTTTAGGTAATACAAACATGTTTACTCTCAAACAAAAGTGAGAATGCAAATACGCTATATAAGAGTATATAAAATGTTTGTCGGAACTACACTGCTATGAATGTAATTAGCTA 143 21281651 0.967535235 30 141 772 0.989130435 1.959041392 0.10326087 0.258741259 0.423913043 143 1 1 182 2L:21281411-21281713 6 CG8671 FBtr0081483|FBtr0330679|FBtr0114602|FBtr0346464|FBtr0330678|FBtr0330680|FBtr0081484 21281513|21281513|21281513|21281513|21281513|21281513|21281513 21282037|21282514|21282037|21282790|21282514|21282037|21282037 TACGCT 6mer3-8 dme-miR-965-3p 2L + 21281613 21281673 3'utr CG8671 FlyBase G4561.2 CAAACATGTTTACTCTCAAACAAAAGTGAGAATGCAAATACGCTATATAAGAGTATATAAA 19 21281651 0.948675233 4 18 81 0.923076923 1.380211242 0 0.263157895 0.461538462 19 2 0 24 2L:21281613-21281673 6 32.5 396 FBgn0032938 1894.276667 62.21666667 95.35 0.017156945 0.522368069 0.340849502 0 0 0 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 2L 21286198 21286204 - 2L_21286198_21286204_- 0.777542057 0.781438075 0.779490066 0.002754888 Mio FBtr0301461|FBtr0301459|FBtr0301457|FBtr0301460|FBtr0301464|FBtr0081524|FBtr0301458|FBtr0081525|FBtr0301462|FBtr0081527|FBtr0301463 21286076|21286076|21286079|21286076|21286076|21286076|21286076|21286076|21286076|21286076|21286076 21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291 2L - 21286182 21286236 3'utr Mio FlyBase G12195.2 AAATAATTTTTGCTAACTGCTCAGCACTAATTGTACAAAATGCCTGATGAGCATA 31 21286206 0.971763703 6 28 169 0.921052632 1.544068044 0.368421053 0.193548387 0.342105263 31 3 0 35 2L:21286182-21286236 7 Mio FBtr0081525|FBtr0301462|FBtr0081527|FBtr0301463|FBtr0081524|FBtr0301458|FBtr0301460|FBtr0301459|FBtr0301464|FBtr0301461|FBtr0301457 21286076|21286076|21286076|21286076|21286076|21286076|21286076|21286076|21286076|21286076|21286079 21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291 GTACAAA 7mer-A1 dme-miR-305-5p 2L - 21286179 21286215 3'utr Mio FlyBase G9342.1 CAGCACTAATTGTACAAAATGCCTGATGAGCATATTT 10 21286206 0.764914298 3 8 61 0.846153846 1.041392685 0.076923077 0.2 0.384615385 10 2 0 11 2L:21286179-21286215 7 19.5 397 FBgn0032940 1888.76 53.04 81.26333333 0.010324234 0.367647059 0.239960622 2 2 2 0.15 dme-miR-7-5p 7mer-A1 TCTTCCA 2L 21319125 21319131 + 2L_21319125_21319131_+ 0.79374481 0.753156961 0.773450885 0.028699909 crc FBtr0081512|FBtr0332001|FBtr0081513|FBtr0332002 21319056|21319056|21319056|21319056 21319527|21319527|21319527|21319527 2L + 21319086 21319133 3'utr crc FlyBase G5894.1 CGTCGTTTGCAAAGTTATTGTTATAGTTAAACCCAAGCCTCTTCCATA 7 21319103 0.930633238 4 6 58 0.888888889 0.602059991 0.222222222 0.285714286 0.444444444 7 0 1 8 2L:21319086-21319133 7 crc FBtr0081513|FBtr0332002|FBtr0081512|FBtr0332001 21319056|21319056|21319056|21319056 21319527|21319527|21319527|21319527 TCTTCCA 7mer-A1 dme-miR-7-5p 2L + 21319004 21319135 stop_codon crc FlyBase G4578.1 ATGCGCTATCTGCGCCAGCTGATTCGAGAGTTCTACCATGAACGCAAGCGCTAGGCTTTATTTTCTTTGAAATCAATTTTATCGTCGTTTGCAAAGTTATTGTTATAGTTAAACCCAAGCCTCTTCCATAAA 27 21319103 0.877541477 19 24 227 0.771428571 1.431363764 0.057142857 0.148148148 0.342857143 27 8 0 27 2L:21319004-21319135 7 3 398 FBgn0000370 8504.88 510.09 782.7766667 0.000352739 0.005881315 0.003832511 22 22 22 0.15 dme-miR-318-3p 6mer2-7 CCAGTG 2L 21319285 21319290 + 2L_21319285_21319290_+ 0.998776623 0.953560053 0.976168338 0.031972894 crc FBtr0081512|FBtr0332001|FBtr0081513|FBtr0332002 21319056|21319056|21319056|21319056 21319527|21319527|21319527|21319527 2L + 21319146 21319340 3'utr crc FlyBase G5895.1 TCATAATGTTTCAATGTAATACTATCAATAACAATCTCCGGGTTGCCCAAAATCTACAAATCACCAAAGTACGCAGCCTGTCCTTTGTCCTACATTTTTGGCACTAATGACGAGTCTCTGAATTCGGAAATATTTGTTGCCAGTGGGGCCTAAAGGCGACCCCATATCCCAAGCAGCACGGTCCAATGTAAAAAC 62 21319280 0.97814563 23 57 379 0.927536232 1.505149978 0.202898551 0.112903226 0.202898551 62 4 1 64 2L:21319146-21319340 6 crc FBtr0081513|FBtr0332002|FBtr0081512|FBtr0332001 21319056|21319056|21319056|21319056 21319527|21319527|21319527|21319527 CCAGTG 6mer2-7 dme-miR-318-3p 2L + 21319242 21319337 3'utr crc FlyBase G4580.1 TTTGGCACTAATGACGAGTCTCTGAATTCGGAAATATTTGTTGCCAGTGGGGCCTAAAGGCGACCCCATATCCCAAGCAGCACGGTCCAATGTAAA 24 21319279 0.901642514 10 22 140 0.875 1.544068044 0.175 0.416666667 0.65 24 5 0 35 2L:21319242-21319337 6 15 399 FBgn0000370 8504.88 510.09 782.7766667 0.001763693 0.029406575 0.019162554 5 6 5.5 0.15 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2L 21356913 21356918 + 2L_21356913_21356918_+ 0.898063847 0.990609398 0.944336623 0.065439621 Tsp39D FBtr0273404 21356804 21358271 2L + 21356898 21356965 3'utr Tsp39D FlyBase G5903.1 TATTTTACATGCCCATTGAAGGCTGATTATCTTATTTATAACTAGATATATTATATTAATTTAATTTA 68 21356914 0.811831203 14 63 602 0.933333333 1.367976785 0.026666667 0.102941176 0.186666667 68 3 2 70 2L:21356898-21356965 6 Tsp39D FBtr0273404 21356804 21358271 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2L + 21356856 21356940 3'utr Tsp39D FlyBase G4584.1 GCTTCACAAGAACTATTACAAAAATGAAATCACAAAATATTCTATTTTACATGCCCATTGAAGGCTGATTATCTTATTTATAACT 50 21356914 0.979807676 7 43 410 0.861111111 1.315270435 0.027777778 0.36 0.555555556 50 8 2 62 2L:21356856-21356940 6 52.5 400 FBgn0032943 321.6666667 16.54333333 25.32333333 0.163212435 3.17348378 2.073186784 -1 -1 -1 0.15 dme-miR-305-3p 6mer3-8 ATGTGC 2L 21357313 21357318 + 2L_21357313_21357318_+ 0.788517814 0.999892285 0.894205049 0.149464342 Tsp39D FBtr0273404 21356804 21358271 2L + 21357125 21357336 3'utr Tsp39D FlyBase G5905.1 TTTTAATGTTTGCTTGAATTTGTATGCCATATACAAATTTAAGTACGTTTTATTAAGGCTGTCACTTTGGTTCGATTTCCATTCATTCGTACTTCAATATTTCATATTATAATAAAGTGACCTTGTAGCGTTTATCTATGTACTACCTTTATTCACATAAAGAATGTTCGAAGGTATGTAGAGTGACGATGTGCATCTCTTTACAGTAAAAA 49 21357316 0.89632265 21 46 457 0.928571429 1.716003344 0.142857143 0.142857143 0.25 49 4 0 52 2L:21357125-21357336 6 Tsp39D FBtr0273404 21356804 21358271 ATGTGC 6mer3-8 dme-miR-305-3p 2L + 21357295 21357335 3'utr Tsp39D FlyBase G4587.1 AAGGTATGTAGAGTGACGATGTGCATCTCTTTACAGTAAAA 11 21357325 0.659094719 6 11 80 1 1.204119983 0.125 0.363636364 0.5625 11 0 0 16 2L:21357295-21357335 6 14 401 FBgn0032943 321.6666667 16.54333333 25.32333333 0.043523316 0.846262341 0.552849809 -3 -12 -7.5 0.15 dme-miR-14-3p 7mer-A1 AGACTGA 2L 21357475 21357481 + 2L_21357475_21357481_+ 0.797295716 0.783560298 0.790428007 0.009712394 Tsp39D FBtr0273404 21356804 21358271 2L + 21357452 21357489 3'utr Tsp39D FlyBase G5907.1 TTAAAACATTTCTTTAGAATTCGAGACTGAATGACATA 12 21357471 0.788036854 4 11 79 0.9375 1.176091259 0.3125 0.25 0.4375 12 1 0 15 2L:21357452-21357489 7 Tsp39D FBtr0273404 21356804 21358271 AGACTGA 7mer-A1 dme-miR-14-3p 2L + 21357462 21357487 3'utr Tsp39D FlyBase G4588.1 TCTTTAGAATTCGAGACTGAATGACA 5 21357465 0.634183922 3 4 30 1 1.079181246 0.333333333 0.6 0.833333333 5 0 0 12 2L:21357462-21357487 7 8.5 402 FBgn0032943 321.6666667 16.54333333 25.32333333 0.02642487 0.513802136 0.335658813 4 10 7 0.15 dme-bantam-3p 6mer3-8 TGATCT 2L 21357585 21357590 + 2L_21357585_21357590_+ 0.997630212 0.994694292 0.996162252 0.002075995 Tsp39D FBtr0273404 21356804 21358271 2L + 21357555 21357606 3'utr Tsp39D FlyBase G5908.1 CGGAACCAAAACATTATCAAATAAAACTAATGATCTGTAAAAATATTTGTAT 24 21357585 0.962892583 4 24 125 1 1.505149978 0 0.25 0.4375 24 0 0 32 2L:21357555-21357606 6 Tsp39D FBtr0273404 21356804 21358271 TGATCT 6mer3-8 dme-bantam-3p 2L + 21357567 21357597 3'utr Tsp39D FlyBase G4589.1 ATTATCAAATAAAACTAATGATCTGTAAAAA 9 21357585 0.731309113 2 9 48 1 1 0 0.111111111 0.2 9 0 0 10 2L:21357567-21357597 6 16 403 FBgn0032943 321.6666667 16.54333333 25.32333333 0.049740933 0.967156962 0.631828353 0 0 0 0.15 dme-miR-282-5p 6mer2-7 GAGGCT 2L 21358089 21358094 + 2L_21358089_21358094_+ 0.997418494 0.978333093 0.987875794 0.013495416 Tsp39D FBtr0273404 21356804 21358271 2L + 21358030 21358108 3'utr Tsp39D FlyBase G5912.1 ATATACCTAAATATATCGAATTTACAATTTTCATATCGACTTATATGTAGATTAACTTCGAGGCTTTACAATAAAACAA 43 21358095 0.985229093 6 41 339 0.960784314 1.389166084 0.019607843 0.11627907 0.254901961 43 1 1 49 2L:21358030-21358108 6 Tsp39D FBtr0273404 21356804 21358271 GAGGCT 6mer2-7 dme-miR-282-5p 2L + 21358066 21358106 3'utr Tsp39D FlyBase G4590.1 CGACTTATATGTAGATTAACTTCGAGGCTTTACAATAAAAC 28 21358095 0.781068908 4 27 222 0.97826087 1.653212514 0 0.392857143 0.630434783 28 1 0 45 2L:21358066-21358106 6 35 404 FBgn0032943 321.6666667 16.54333333 25.32333333 0.10880829 2.115655853 1.382124523 -6 -6 -6 0.15 dme-miR-7-5p 7mer-A1 TCTTCCA 2L 2156563 2156569 - 2L_2156563_2156569_- 0.823309375 0.823291217 0.823300296 1.29E-05 aop FBtr0077850|FBtr0330658|FBtr0077851 2156482|2156482|2156482 2158164|2158164|2158164 2L - 2156518 2156786 3'utr aop FlyBase G6954.1 TTGAAGCACTTTATTAATTACATTAAACGGAATGAACAGAGTTAGGAGAAGATATCATCGCTGCACGTTCATACAATTAGCCTGTAGTGCAACTGTAATTATTAATTATTGTGTAGATCTACGCTAAAGTTAATTTTCTATTTGTTTTTCGTACGCCTTAAGTTTAAACACCGCCAATAGCTAATAATTAGCACTCTAGTGTCGCCACAATACCTGTTCTTCCATTGAAAACGTTATCTTTCGATCAATACATAATTTATATATGTATA 166 2156570 0.986510365 32 163 1204 0.984615385 1.982271233 0.179487179 0.138554217 0.266666667 166 2 1 192 2L:2156518-2156786 7 aop FBtr0077851|FBtr0330658|FBtr0077850 2156482|2156482|2156482 2158164|2158164|2158164 TCTTCCA 7mer-A1 dme-miR-7-5p 2L - 2156529 2156643 3'utr aop FlyBase G5437.1 GTTTTTCGTACGCCTTAAGTTTAAACACCGCCAATAGCTAATAATTAGCACTCTAGTGTCGCCACAATACCTGTTCTTCCATTGAAAACGTTATCTTTCGATCAATACATAATTT 76 2156570 0.776862656 17 76 540 1 2.033423755 0.12037037 0.368421053 0.555555556 76 0 0 108 2L:2156529-2156643 7 91 405 FBgn0000097 634.18 16.10666667 24.79666667 0.143492384 5.649834437 3.669848098 1 1 1 0.15 dme-miR-980-5p 8mer-A1 GAAAAACA 2L 2157057 2157064 - 2L_2157057_2157064_- 0.581301598 0.58454216 0.582921879 0.00229145 aop FBtr0077850|FBtr0330658|FBtr0330659|FBtr0077851 2156482|2156482|2156790|2156482 2158164|2158164|2158164|2158164 2L - 2156970 2157134 5'utr aop FlyBase G6955.2 AAAGAGCTTTCAAAATTCAATTTCAATTGAGCCCCTAGCCCTAGATACACTGCAACAAGAAACACGGATAGAAAAACATTGGCTTCCATTTTAATATAGCAATGATGATACACACAAGCATATATGTATACACATTAGTTTTCTATTGCTCTTAATTTTATTTTT 110 2157056 0.983029803 15 107 858 0.976377953 2.093421685 0.165354331 0.127272727 0.244094488 110 3 0 124 2L:2156970-2157134 8 aop FBtr0330659|FBtr0077851|FBtr0330658|FBtr0077850 2156790|2156482|2156482|2156482 2158164|2158164|2158164|2158164 GAAAAACA 8mer-A1 dme-miR-980-5p 2L - 2156966 2157077 5'utr aop FlyBase G5440.1 AGAAACACGGATAGAAAAACATTGGCTTCCATTTTAATATAGCAATGATGATACACACAAGCATATATGTATACACATTAGTTTTCTATTGCTCTTAATTTTATTTTTATTA 76 2157056 0.985104175 11 75 616 0.990291262 2.008600172 0.281553398 0.289473684 0.475728155 76 1 0 102 2L:2156966-2157077 8 76.5 406 FBgn0000097 634.18 16.10666667 24.79666667 0.120628213 4.749586093 3.085092082 -8 -8 -8 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 2157269 2157275 - 2L_2157269_2157275_- 0.801448561 0.801604841 0.801526701 0.00011045 aop FBtr0077850|FBtr0077850|FBtr0077850|FBtr0330658|FBtr0330658|FBtr0330658|FBtr0330659|FBtr0330659|FBtr0330659|FBtr0077851|FBtr0077851|FBtr0077851 2156482|2156482|2156482|2156482|2156482|2156482|2156790|2156790|2156790|2156482|2156482|2156482 2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164 2L - 2157214 2157287 5'utr aop FlyBase G6956.1 AAATTGATTTCGTGTGATAACAACAGAATTATCTTTGATTCACATTGGCTGAATGCTAACGAAACCAGAGCAGT 12 2157282 0.977306607 11 12 78 1 1.255272505 0.055555556 0.333333333 0.555555556 12 0 0 18 2L:2157214-2157287 7 aop FBtr0330659|FBtr0330659|FBtr0330659|FBtr0077851|FBtr0077851|FBtr0077851|FBtr0330658|FBtr0330658|FBtr0330658|FBtr0077850|FBtr0077850|FBtr0077850 2156790|2156790|2156790|2156482|2156482|2156482|2156482|2156482|2156482|2156482|2156482|2156482 2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 2157222 2157288 5'utr aop FlyBase G5442.1 CAAATTGATTTCGTGTGATAACAACAGAATTATCTTTGATTCACATTGGCTGAATGCTAACGAAACC 14 2157283 0.98809634 8 11 102 0.833333333 0.698970004 0.166666667 0.5 0.708333333 14 1 3 20 2L:2157222-2157288 7 10 407 FBgn0000097 634.18 16.10666667 24.79666667 0.015768394 0.620860927 0.403280011 7 8 7.5 0.15 dme-miR-305-3p 8mer-A1 ATGTGCCA 2L 2157603 2157610 - 2L_2157603_2157610_- 0.612025271 0.612573055 0.612299163 0.000387353 aop FBtr0077850|FBtr0330660|FBtr0330658|FBtr0330659|FBtr0077851 2156482|2157425|2156482|2156790|2156482 2158164|2158164|2158164|2158164|2158164 2L - 2157588 2157859 3'utr aop FlyBase G6958.1 AATTCAATTCTTGATCAAAGGCTTCTTCTAACCATTGCTGCTTTATACTTTCTTTGCGGCTGTCAAACGACCTTTCCGACTTTCTGTACATAGAAATCACATCTGCATAAACCAACAAACAATCATACATAAATACATTTATTTTATACATCAAGCGTATTTATTAAGCTAAGCTAAGCAAGAGCAGAGTGCATGTAATTTCGTTGTTGTAAGTAGATTTCTTGAGCCGGCGCAGCGCAGCCTTCGATTATGTGCCAATTTCTACATTTATC 54 2157611 0.985471234 31 49 409 0.869565217 1.477121255 0.202898551 0.148148148 0.333333333 54 8 1 60 2L:2157588-2157859 8 aop FBtr0330659|FBtr0077851|FBtr0330660|FBtr0330658|FBtr0077850 2156790|2156482|2157425|2156482|2156482 2158164|2158164|2158164|2158164|2158164 ATGTGCCA 8mer-A1 dme-miR-305-3p 2L - 2157584 2157694 3'utr aop FlyBase G5445.1 AAGCTAAGCTAAGCAAGAGCAGAGTGCATGTAATTTCGTTGTTGTAAGTAGATTTCTTGAGCCGGCGCAGCGCAGCCTTCGATTATGTGCCAATTTCTACATTTATCAAAC 32 2157637 0.965322325 13 30 157 0.976190476 1.311753861 0.166666667 0.28125 0.452380952 32 0 1 41 2L:2157584-2157694 8 9 408 FBgn0000097 634.18 16.10666667 24.79666667 0.014191554 0.558774834 0.36295201 1 27 14 0.15 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 2L 2158088 2158094 - 2L_2158088_2158094_- 0.810240995 0.810460771 0.810350883 0.000155422 aop FBtr0077850|FBtr0330660|FBtr0330658|FBtr0330659|FBtr0077851 2156482|2157425|2156482|2156790|2156482 2158164|2158164|2158164|2158164|2158164 2L - 2157949 2158132 3'utr aop FlyBase G6959.1 ACATCCATCTTCCACTCCCTCCTGAACACACACAACATTACCTGAGCTAAATAATGTGGGACCAGCACAACAAGCGCACAGACACATAGACAGACACTCTGCTGGATAAAATTCTGGATGCCTTTCGGTTAGGATGGGTCGCTTAGAATGCAATCGAAACGGAAAACTCATTATTGAAGATTGT 415 2158095 0.99054615 24 393 1572 0.943248532 1.382017043 0.113502935 0.180722892 0.334637965 415 10 19 482 2L:2157949-2158132 7 aop FBtr0330659|FBtr0077851|FBtr0330660|FBtr0330658|FBtr0077850 2156790|2156482|2157425|2156482|2156482 2158164|2158164|2158164|2158164|2158164 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2L - 2158020 2158213 stop_codon aop FlyBase G5448.1 TTGCAATGGCGGCGAGTCGGAGGACTCCTTCCGACACATGCAGCAGTAGGAGGAGAAGTGTCCTGAGACAATCACCGCACTACATCCATCTTCCACTCCCTCCTGAACACACACAACATTACCTGAGCTAAATAATGTGGGACCAGCACAACAAGCGCACAGACACATAGACAGACACTCTGCTGGATAAAATT 228 2158095 0.977614159 18 212 806 0.949295775 2.050508646 0.098591549 0.399122807 0.614084507 228 16 2 337 2L:2158020-2158213 7 182 409 FBgn0000097 634.18 16.10666667 24.79666667 0.286984768 11.29966887 7.339696196 1 1 1 0.15 dme-miR-14-3p 6mer3-8 AAGACT 2L 21614804 21614809 - 2L_21614804_21614809_- 0.989534147 0.964643894 0.97708902 0.017600029 CG2201 FBtr0305503|FBtr0085922|FBtr0085921|FBtr0345685|FBtr0085923 21614230|21614764|21614764|21614764|21614764 21614977|21614977|21614977|21614977|21614977 2L - 21614790 21614823 3'utr CG2201 FlyBase G12226.1 TCGAACTACTTTAAAAGACTATTAAAATTTGTAA 12 21614802 0.679622164 4 11 80 0.947368421 1.255272505 0.263157895 0.333333333 0.578947368 12 1 0 18 2L:21614790-21614823 6 CG2201 FBtr0085923|FBtr0085921|FBtr0345685|FBtr0305503|FBtr0085922 21614764|21614764|21614764|21614230|21614764 21614977|21614977|21614977|21614977|21614977 AAGACT 6mer3-8 dme-miR-14-3p 2L - 21614795 21614823 3'utr CG2201 FlyBase G9363.1 TCGAACTACTTTAAAAGACTATTAAAATT 11 21614802 0.703262973 3 9 73 0.833333333 0.698970004 0 0.090909091 0.166666667 11 1 1 10 2L:21614795-21614823 6 11.5 410 FBgn0032955 595.71 31.05 47.65333333 0.019304695 0.37037037 0.241326245 -7 -7 -7 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 21647061 21647066 + 2L_21647061_21647066_+ 0.962584742 0.943542525 0.953063634 0.013464869 Ac3 FBtr0085897 21646824 21647964 2L + 21647045 21647071 3'utr Ac3 FlyBase G5932.1 TGCTTTTGTAAACTGTGTACCTAAAAC 12 21647060 0.753637546 3 11 85 0.933333333 0.84509804 0 0.25 0.4 12 0 1 14 2L:21647045-21647071 6 Ac3 FBtr0085897 21646824 21647964 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 21647037 21647072 3'utr Ac3 FlyBase G4605.1 AATAGATTTGCTTTTGTAAACTGTGTACCTAAAACA 9 21647060 0.917437236 2 9 56 1 1.146128036 0 0.444444444 0.642857143 9 0 0 14 2L:21647037-21647072 6 10 411 FBgn0023416 614.5733333 23.08666667 35.21333333 0.016271451 0.433150448 0.28398334 1 1 1 0.15 dme-miR-980-3p 7mer-A1 GCAGCTA 2L 21647196 21647202 + 2L_21647196_21647202_+ 0.823283069 0.823259274 0.823271171 1.68E-05 Ac3 FBtr0085897 21646824 21647964 2L + 21647167 21647216 3'utr Ac3 FlyBase G5933.1 AGCTCTGTAATATTTAAGTGATTCGCTTTGCAGCTAATTGATGTGCAGAT 62 21647194 0.78478928 6 59 620 0.955882353 1.511883361 0.352941176 0.080645161 0.161764706 62 2 1 65 2L:21647167-21647216 7 Ac3 FBtr0085897 21646824 21647964 GCAGCTA 7mer-A1 dme-miR-980-3p 2L + 21647170 21647216 3'utr Ac3 FlyBase G4606.1 TCTGTAATATTTAAGTGATTCGCTTTGCAGCTAATTGATGTGCAGAT 41 21647193 0.796142289 5 41 432 1 1.755874856 0.333333333 0.268292683 0.473684211 41 0 0 57 2L:21647170-21647216 7 51.5 412 FBgn0023416 614.5733333 23.08666667 35.21333333 0.083797974 2.230724805 1.462514199 2 3 2.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2L 21664320 21664326 - 2L_21664320_21664326_- 0.82334952 0.823343609 0.823346565 4.17E-06 CG2225 FBtr0085917|FBtr0304885|FBtr0085915|FBtr0085914|FBtr0332967|FBtr0100618|FBtr0085918 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 2L - 21664178 21664371 3'utr CG2225 FlyBase G12241.1 GAAGTTGAGTGGTTGGAAAGGAAAATTGCAATATGTAAACGTTTACTAGTCATTAAATATAAAAAATGAACCATAAAAAATGTATAAGAAAGATAACATATTTTTTATTAACACTCAGTGGATGCCAAAAACATAAATATTGGAATCATTTTATCAGCGGGAGCTGTGGCACTCAAAAACAAGATAAAATTATT 108 21664328 0.983677919 21 99 767 0.9375 1.77815125 0.2578125 0.157407407 0.2890625 108 7 1 120 2L:21664178-21664371 7 CG2225 FBtr0100618|FBtr0085918|FBtr0085914|FBtr0332967|FBtr0304885|FBtr0085915|FBtr0085917 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 21664296 21664373 3'utr CG2225 FlyBase G9377.1 ATGAAGTTGAGTGGTTGGAAAGGAAAATTGCAATATGTAAACGTTTACTAGTCATTAAATATAAAAAATGAACCATAA 51 21664319 0.87925287 9 41 369 0.829268293 1.355387658 0.317073171 0.450980392 0.658536585 51 12 2 68 2L:21664296-21664373 7 59 413 FBgn0032957 1484.293333 32.49333333 50.1 0.039749555 1.815757078 1.177644711 2 -7 -2.5 0.15 dme-miR-304-5p 8mer-A1 TGAGATTA 2L 21664568 21664575 - 2L_21664568_21664575_- 0.623195506 0.623298954 0.62324723 7.32E-05 CG2225 FBtr0085917|FBtr0304885|FBtr0085915|FBtr0085914|FBtr0332967|FBtr0100618|FBtr0085918 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 2L - 21664480 21664599 3'utr CG2225 FlyBase G12242.1 GAGTGCAACACAGGAAAATCAAGTTGAGATTATAAAAAAATTCTTAAAACTGATACGTATAGAATTTCCAAAAACTGAAACAGAATGAAGTTAAACCCTCCACATTTTAACGAATGTTTG 39 21664576 0.968466409 6 39 217 1 1.643452676 0.090909091 0.128205128 0.227272727 39 0 0 44 2L:21664480-21664599 8 CG2225 FBtr0100618|FBtr0085918|FBtr0085914|FBtr0332967|FBtr0304885|FBtr0085915|FBtr0085917 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 TGAGATTA 8mer-A1 dme-miR-304-5p 2L - 21664530 21664589 3'utr CG2225 FlyBase G9378.1 CAGGAAAATCAAGTTGAGATTATAAAAAAATTCTTAAAACTGATACGTATAGAATTTCCA 33 21664576 0.791235382 5 33 180 1 1.69019608 0.142857143 0.363636364 0.571428571 33 0 0 49 2L:21664530-21664589 8 31 414 FBgn0032957 1484.293333 32.49333333 50.1 0.02088536 0.954041855 0.618762475 1 1 1 0.15 dme-miR-14-3p 8mer-A1 AAGACTGA 2L 21665191 21665198 - 2L_21665191_21665198_- 0.643507172 0.643563517 0.643535344 3.98E-05 CG2225 FBtr0085917|FBtr0304885|FBtr0085915|FBtr0085914|FBtr0332967|FBtr0100618|FBtr0085918 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 2L - 21665183 21665242 3'utr CG2225 FlyBase G12245.1 GAAGACAATTGGAAAATTCAAATGCACAAAAGCCGTGAATCGTAAAGACTGACAATGAAA 21 21665200 0.940429867 3 20 79 0.958333333 1.361727836 0.375 0.142857143 0.25 21 1 0 23 2L:21665183-21665242 8 CG2225 FBtr0100618|FBtr0085918|FBtr0085914|FBtr0332967|FBtr0304885|FBtr0085915|FBtr0085917 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 AAGACTGA 8mer-A1 dme-miR-14-3p 2L - 21665179 21665223 3'utr CG2225 FlyBase G9381.1 AAATGCACAAAAGCCGTGAATCGTAAAGACTGACAATGAAAAAAA 12 21665200 0.943823986 4 11 40 0.85 1.230448921 0.35 0.333333333 0.6 12 3 0 17 2L:21665179-21665223 8 14.5 415 FBgn0032957 1484.293333 32.49333333 50.1 0.009768959 0.446245384 0.289421158 2 2 2 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC 2L 21665290 21665296 - 2L_21665290_21665296_- 0.639417312 0.661284643 0.650350978 0.015462516 CG2225 FBtr0085917|FBtr0304885|FBtr0085915|FBtr0085914|FBtr0332967|FBtr0100618|FBtr0085918 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 2L - 21665274 21665347 3'utr CG2225 FlyBase G12246.1 ATCTTTGCACTCACCTAGTCACTCACCTGCTCATTCGATCAGCAAAGCGCTTGTGTTCGTTCGCCTTGAAAAAA 34 21665297 0.894278006 8 32 241 0.951219512 1.290034611 0.146341463 0.176470588 0.317073171 34 1 1 39 2L:21665274-21665347 7 CG2225 FBtr0100618|FBtr0085918|FBtr0085914|FBtr0332967|FBtr0304885|FBtr0085915|FBtr0085917 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 TGTGTTC 7mer-m8 dme-miR-317-3p 2L - 21665270 21665381 3'utr CG2225 FlyBase G9382.1 CATTAACTTCTATCGGGTCGAAACCTGCCAGTTCATCTTTGCACTCACCTAGTCACTCACCTGCTCATTCGATCAGCAAAGCGCTTGTGTTCGTTCGCCTTGAAAAAATACA 23 21665297 0.983318551 10 23 167 1 1.51851394 0.121212121 0.260869565 0.484848485 23 0 0 33 2L:21665270-21665381 7 22 416 FBgn0032957 1484.293333 32.49333333 50.1 0.014821868 0.677061961 0.439121756 1 1 1 0.15 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 21678058 21678063 - 2L_21678058_21678063_- 0.995458208 0.768134277 0.881796242 0.160742271 EF2 FBtr0332966 21677911 21678310 2L - 21678049 21678079 3'utr EF2 FlyBase G12261.1 AAATCAGAGCGCCGCTATGTGACTGACACGA 6 21678061 0.579204898 3 5 21 0.833333333 0.698970004 0.166666667 0 0 6 1 0 5 2L:21678049-21678079 6 EF2 FBtr0332966 21677911 21678310 ATGTGA 6mer3-8 dme-miR-1003-3p 2L - 21678050 21678084 3'utr EF2 FlyBase G9388.1 TACATAAATCAGAGCGCCGCTATGTGACTGACACG 14 21678062 0.905374703 2 14 45 1 1.414973348 0.115384615 0.5 0.730769231 14 0 0 26 2L:21678050-21678084 6 10 417 FBgn0000559 36020.00333 1557.58 2372.66 0.000277624 0.006420216 0.004214679 -2 -1 -1.5 0.15 dme-miR-79-3p 6mer3-8 TAGCTT 2L 21728586 21728591 + 2L_21728586_21728591_+ 0.999999715 0.999999148 0.999999431 4.24E-07 CG31619 FBtr0085901|FBtr0339131|FBtr0110959|FBtr0339132|FBtr0307497|FBtr0301000 21728172|21728122|21728172|21728172|21728172|21728172 21729051|21729051|21729051|21729051|21729051|21729051 2L + 21728554 21728605 3'utr CG31619 FlyBase G5974.1 TGACATCCATTGTCGGTTCATAGCACTGAAATTAGCTTCGATTACCACTTAG 29 21728574 0.71678821 5 28 215 0.970588235 1.217483944 0.147058824 0.137931034 0.264705882 29 0 1 33 2L:21728554-21728605 6 CG31619 FBtr0339132|FBtr0110959|FBtr0339131|FBtr0085901|FBtr0301000|FBtr0307497 21728172|21728172|21728122|21728172|21728172|21728172 21729051|21729051|21729051|21729051|21729051|21729051 TAGCTT 6mer3-8 dme-miR-79-3p 2L + 21728562 21728601 3'utr CG31619 FlyBase G4638.1 ATTGTCGGTTCATAGCACTGAAATTAGCTTCGATTACCAC 13 21728586 0.72101481 6 12 83 0.944444444 1.230448921 0.055555556 0.307692308 0.5 13 1 0 17 2L:21728562-21728601 6 16.5 418 FBgn0051619 2354.866667 61.1 93.72666667 0.007006766 0.2700491 0.176043815 12 0 6 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 2L 21729007 21729013 + 2L_21729007_21729013_+ 0.748223552 0.754268463 0.751246007 0.00427439 CG31619 FBtr0085901|FBtr0339131|FBtr0110959|FBtr0339132|FBtr0307497|FBtr0301000 21728172|21728122|21728172|21728172|21728172|21728172 21729051|21729051|21729051|21729051|21729051|21729051 2L + 21728991 21729019 3'utr CG31619 FlyBase G5977.1 AAATTTGAGATGCATTGTACAAAAATTGG 12 21729005 0.712881828 2 11 64 1 1.113943352 0.307692308 0.083333333 0.153846154 12 0 0 13 2L:21728991-21729019 7 CG31619 FBtr0339132|FBtr0110959|FBtr0339131|FBtr0085901|FBtr0301000|FBtr0307497 21728172|21728172|21728122|21728172|21728172|21728172 21729051|21729051|21729051|21729051|21729051|21729051 GTACAAA 7mer-A1 dme-miR-305-5p 2L + 21728989 21729022 3'utr CG31619 FlyBase G4640.1 ACAAATTTGAGATGCATTGTACAAAAATTGGAAC 7 21729005 0.971409473 3 5 36 0.8 0.903089987 0.2 0.428571429 0.6 7 2 0 8 2L:21728989-21729022 7 8.5 419 FBgn0051619 2354.866667 61.1 93.72666667 0.003609546 0.139116203 0.090689238 2 2 2 0.15 dme-miR-34-5p 6mer3-8 CACTGC 2L 21740337 21740342 - 2L_21740337_21740342_- 0.810888789 0.950938677 0.880913733 0.099030234 step FBtr0332471 21740039 21741582 2L - 21740316 21740384 3'utr step FlyBase G12275.1 AATTGCAATATTATAAATACTTTAGTTTGATTTGTACATATACACTGCTGTGCACTATCCATTTCGTAT 8 21740338 0.979079289 6 8 66 1 1.113943352 0.153846154 0.5 0.692307692 8 0 0 13 2L:21740316-21740384 6 step FBtr0332471 21740039 21741582 CACTGC 6mer3-8 dme-miR-34-5p 2L - 21740322 21740363 3'utr step FlyBase G9402.1 TTAGTTTGATTTGTACATATACACTGCTGTGCACTATCCATT 7 21740338 0.741299185 5 7 56 1 1.041392685 0.090909091 0.428571429 0.636363636 7 0 0 11 2L:21740322-21740363 6 5.5 420 FBgn0086779 2401.73 84.77 129.5966667 0.002290016 0.064881444 0.042439363 -4 -4 -4 0.15 dme-miR-14-3p 7mer-A1 AGACTGA 2L 21740514 21740520 - 2L_21740514_21740520_- 0.781444164 0.784836101 0.783140132 0.002398435 step FBtr0332471 21740039 21741582 2L - 21740505 21740702 3'utr step FlyBase G12276.2 AAGAATGTATAAATTGCCCGTTGATGTGTAAGCAAAAAACTATAAGTCAAAAAATCATCAAACAAGAACTCTGTTGCCAGCACTGATTTTATAGTAGCCTAAAGATGCTATTAGAAAATAGTTATAGTAAATTGTGTGTCGTGGCGCTGTGATATCATTGATAGGAAAGAGCTTCTGTGTTGAGACTGAAAAAACATT 859 21740523 0.81204467 35 833 5454 0.968335036 2.374748346 0.233912155 0.124563446 0.231869254 859 28 3 948 2L:21740505-21740702 7 step FBtr0332471 21740039 21741582 AGACTGA 7mer-A1 dme-miR-14-3p 2L - 21740505 21740649 3'utr step FlyBase G9404.1 ATCATCAAACAAGAACTCTGTTGCCAGCACTGATTTTATAGTAGCCTAAAGATGCTATTAGAAAATAGTTATAGTAAATTGTGTGTCGTGGCGCTGTGATATCATTGATAGGAAAGAGCTTCTGTGTTGAGACTGAAAAAACATT 500 21740523 0.732976311 24 482 3131 0.966942149 2.147367108 0.252066116 0.34 0.545454545 500 20 4 702 2L:21740505-21740649 7 610 421 FBgn0086779 2401.73 84.77 129.5966667 0.253983587 7.195941961 4.706911186 3 3 3 0.15 dme-miR-1006-3p 6mer2-7 GAATTT 2L 21740913 21740918 - 2L_21740913_21740918_- 0.774043279 0.75756008 0.765801679 0.011655382 step FBtr0332471 21740039 21741582 2L - 21740825 21740971 3'utr step FlyBase G12277.1 TTAATAAATGCAATTCTTAAATTAGTTTAGACGGCAAATTATGTTCTTTCTGAGAATTTGGACTACGTGACATAGTTTTTATTGAACCAAAGATCGAATTTAAACTATTATTACTATCAATACCAACTTTCACCACAATACACACTT 731 21740913 0.985530995 25 717 5952 0.976640712 2.244524512 0.071190211 0.191518468 0.342602892 731 17 4 878 2L:21740825-21740971 6 step FBtr0332471 21740039 21741582 GAATTT 6mer2-7 dme-miR-1006-3p 2L - 21740831 21740953 3'utr step FlyBase G9406.1 AAATTAGTTTAGACGGCAAATTATGTTCTTTCTGAGAATTTGGACTACGTGACATAGTTTTTATTGAACCAAAGATCGAATTTAAACTATTATTACTATCAATACCAACTTTCACCACAATAC 485 21740913 0.793076961 25 476 3743 0.987359551 2.36983407 0.077247191 0.364948454 0.56741573 485 7 2 703 2L:21740831-21740953 6 563 422 FBgn0086779 2401.73 84.77 129.5966667 0.23441436 6.641500531 4.344247537 -5 -5 -5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2L 21836980 21836985 + 2L_21836980_21836985_+ 0.980135213 0.980418697 0.980276955 0.000200465 tsh FBtr0085906|FBtr0085906|FBtr0085906 21836181|21836181|21836181 21837011|21837011|21837011 2L + 21836939 21837002 3'utr tsh FlyBase G6008.1 CATGCCAAGGCGAAAAGATATAAAATTGGATAAGAAAACATTGTGATCAAATACAAGATAAAAG 249 21836979 0.954628108 5 238 1092 0.96039604 1.50965048 0.00660066 0.176706827 0.323432343 249 4 8 291 2L:21836939-21837002 6 tsh FBtr0085906|FBtr0085906|FBtr0085906 21836181|21836181|21836181 21837011|21837011|21837011 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 21836938 21837002 3'utr tsh FlyBase G4666.1 ACATGCCAAGGCGAAAAGATATAAAATTGGATAAGAAAACATTGTGATCAAATACAAGATAAAAG 224 21836979 0.955795549 5 213 992 0.952095808 1.461034435 0.005988024 0.361607143 0.571856287 224 6 10 318 2L:21836938-21837002 6 234 423 FBgn0003866 1100.013333 28.07333333 43.04 0.212724694 8.335312277 5.436802974 1 1 1 0.15 dme-miR-190-5p 8mer-A1 ACATATCA 2L 2210047 2210054 - 2L_2210047_2210054_- 0.610529255 0.612755936 0.611642596 0.001574444 CG15385 FBtr0077845|FBtr0331649 2209572|2209944 2210248|2210248 2L - 2210020 2210070 3'utr CG15385 FlyBase G6989.1 ACAAATCGAAAACGATACATATCAATGGAGCACTTGTTAGACTATAAGAAC 25 2210055 0.948275306 5 20 120 0.8125 1.414973348 0.15625 0.24 0.40625 25 6 0 26 2L:2210020-2210070 8 CG15385 FBtr0331649|FBtr0077845 2209944|2209572 2210248|2210248 ACATATCA 8mer-A1 dme-miR-190-5p 2L - 2210037 2210069 3'utr CG15385 FlyBase G5475.1 CAAATCGAAAACGATACATATCAATGGAGCACT 8 2210055 0.857112441 2 8 30 1 1.146128036 0.214285714 0.625 0.785714286 8 0 0 14 2L:2210037-2210069 8 15.5 424 FBgn0031397 4.333333333 0.213333333 0.323333333 3.576923077 72.65625 47.93814433 1 1 1 0.15 dme-miR-1008-3p 6mer2-7 GCTGTG 2L 22125633 22125638 + 2L_22125633_22125638_+ 0.872322621 0.661303015 0.766812818 0.14921339 CG3651 FBtr0331657 22124938 22126614 2L + 22125606 22125664 3'utr CG3651 FlyBase G6026.1 AGTGCTTAAACTTTTCTCATAAGGCTGGCTGTGTTCTGCACGTCGTTCAAGGGCCGTGA 46 22125629 0.898311189 6 44 432 0.964285714 1.431363764 0.375 0.152173913 0.303571429 46 1 1 54 2L:22125606-22125664 6 CG3651 FBtr0331657 22124938 22126614 GCTGTG 6mer2-7 dme-miR-1008-3p 2L + 22125589 22125652 3'utr CG3651 FlyBase G4689.1 TTAACGACTGCAATCCAAGTGCTTAAACTTTTCTCATAAGGCTGGCTGTGTTCTGCACGTCGTT 24 22125631 0.988125073 8 23 207 0.90625 0.860338007 0.40625 0.208333333 0.40625 24 0 3 29 2L:22125589-22125652 6 33.5 425 FBgn0032974 1358.31 57.56666667 88.28333333 0.024663 0.58193399 0.379460072 4 2 3 0.15 dme-miR-1012-3p 7mer-A1 TGACTAA 2L 22128505 22128511 - 2L_22128505_22128511_- 0.798100274 0.82334956 0.810724917 0.017853951 CycK FBtr0085941|FBtr0085942|FBtr0344022 22128262|22128262|22124283 22128520|22128520|22128520 2L - 22128493 22128653 stop_codon CycK FlyBase G12315.1 GGGAGTCCAGCAGACAGTGGTCGGACACTATAGCGGGAGCGCTGCACCACCACCACCAATGCCGCCTAGCTTGCCTCCAGGAGCCAGTGGATACTACAACGCCGGTGGGCGTCCATCGCAGCAGCGCTACTAGTAGATGCAATGACTAATAAACAAGTAAA 26 22128516 0.94457109 11 25 102 1 1.505149978 0.375 0.115384615 0.28125 26 0 0 32 2L:22128493-22128653 7 CycK FBtr0085941|FBtr0085942|FBtr0344022 22128262|22128262|22124283 22128520|22128520|22128520 TGACTAA 7mer-A1 dme-miR-1012-3p 2L - 22128489 22128538 stop_codon CycK FlyBase G9437.1 TCGCAGCAGCGCTACTAGTAGATGCAATGACTAATAAACAAGTAAAAAAA 14 22128516 0.916662662 4 14 63 1 1.230448921 0.235294118 0.214285714 0.352941176 14 0 0 17 2L:22128489-22128538 7 15 426 FBgn0025674 1467.203333 91.78 140.27 0.010223532 0.163434299 0.106936622 5 5 5 0.15 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 2L 22158795 22158800 + 2L_22158795_22158800_+ 0.996133565 0.994297452 0.995215508 0.001298319 CG42748 FBtr0333745|FBtr0303274|FBtr0303272|FBtr0333742|FBtr0303273|FBtr0303271 22157031|22158743|22158743|22158743|22156833|22158743 22159611|22161348|22159611|22159611|22159611|22159611 2L + 22158754 22158811 5'utr CG42748 FlyBase G6049.1 AGAGTAGAAATACTGGTAACCGGCAGTTTATGCTTTTTGTTTGGTGCACGGCATTTTT 8 22158795 0.991179188 3 6 69 0.888888889 0.903089987 0.111111111 0.125 0.222222222 8 1 0 8 2L:22158754-22158811 6 CG42748 FBtr0303274|FBtr0333745|FBtr0303271|FBtr0303273|FBtr0333742|FBtr0303272 22158743|22157031|22158743|22156833|22158743|22158743 22161348|22159611|22159611|22159611|22159611|22159611 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 2L + 22158783 22158828 5'utr CG42748 FlyBase G4706.1 ATGCTTTTTGTTTGGTGCACGGCATTTTTGTAGCCTATCTGCAAAC 7 22158811 0.970251608 5 7 64 1 1.176091259 0.2 0.571428571 0.8 7 0 0 15 2L:22158783-22158828 6 5 427 FBgn0261802 1164 24.91333333 38.18666667 0.004295533 0.200695745 0.130935754 0 -16 -8 0.15 dme-miR-184-5p 6mer2-7 GATAAG 2L 22166277 22166282 - 2L_22166277_22166282_- 0.998883462 0.996976514 0.997929988 0.001348453 Clamp FBtr0100407|FBtr0085964 22165718|22165964 22166551|22166551 2L - 22166226 22166411 3'utr Clamp FlyBase G12338.1 ATATATCACCACAATGATATTAAAGAATAGAAAACGATGTTCCATCGTTAACACTTCAGCTGCATATGTCCTTTCTCCACTTTCATGTGGGATCTTCAAAAATGGGCGAAACCCAAAAACGCTTTTTACGATAAGCATACAAATGAACCTAATTTATTTGATAGCTTGTATAATATACTTAAACAT 207 22166286 0.931790669 28 198 1369 0.948207171 1.899455702 0.131474104 0.178743961 0.322709163 207 11 2 238 2L:22166226-22166411 6 Clamp FBtr0085964|FBtr0100407 22165964|22165718 22166551|22166551 GATAAG 6mer2-7 dme-miR-184-5p 2L - 22166244 22166370 3'utr Clamp FlyBase G9452.2 CCATCGTTAACACTTCAGCTGCATATGTCCTTTCTCCACTTTCATGTGGGATCTTCAAAAATGGGCGAAACCCAAAAACGCTTTTTACGATAAGCATACAAATGAACCTAATTTATTTGATAGCTTG 123 22166286 0.915477747 22 115 751 0.968421053 1.963787827 0.121052632 0.422764228 0.626315789 123 5 1 184 2L:22166244-22166370 6 48 428 FBgn0032979 2178.656667 96.29333333 147.5566667 0.022031925 0.498476876 0.325298755 4 4 4 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 22166522 22166528 - 2L_22166522_22166528_- 0.525929201 0.655362912 0.590646056 0.091523447 Clamp FBtr0100407|FBtr0085964 22165718|22165964 22166551|22166551 2L - 22166476 22166668 stop_codon Clamp FlyBase G12340.1 AAGTACGGCCAAACTGCTCCTCGCCAGACCAGCAGCGATGGGATGATAGTGCATAAGCAGGAGATTCCTGACATGGAGGATGAGGCCCAACAGGAAGTGATTATCGGTGGGTTATAGATAGTTTAAATGCAGAGGTGACAGGCAGCTTAATGAAGTCACAGACACTGGAGTCCACCCTGCTTAGCTTCAGTTT 47 22166521 0.934894167 19 45 176 0.967213115 1.469822016 0.180327869 0.234042553 0.409836066 47 1 1 59 2L:22166476-22166668 7 Clamp FBtr0085964|FBtr0100407 22165964|22165718 22166551|22166551 GGCAGCT 7mer-m8 dme-miR-980-3p 2L - 22166493 22166639 stop_codon Clamp FlyBase G9454.1 CAGCAGCGATGGGATGATAGTGCATAAGCAGGAGATTCCTGACATGGAGGATGAGGCCCAACAGGAAGTGATTATCGGTGGGTTATAGATAGTTTAAATGCAGAGGTGACAGGCAGCTTAATGAAGTCACAGACACTGGAGTCCACC 41 22166521 0.95141308 17 40 175 0.966666667 1.763427994 0.3 0.365853659 0.566666667 41 2 0 58 2L:22166493-22166639 7 16.5 429 FBgn0032979 2178.656667 96.29333333 147.5566667 0.007573474 0.171351426 0.111821447 -7 -7 -7 0.15 dme-miR-252-5p 8mer-m1 GTACTTAG 2L 2220526 2220533 + 2L_2220526_2220533_+ 0.636725729 0.636750016 0.636737873 1.72E-05 mio FBtr0077835 2220409 2220625 2L + 2220463 2220553 3'utr mio FlyBase G1198.1 ATGCATTAAGTTGTTGATTTGTTCCAAACGCGTGCGCCTTAAACAAACTCAGAAGTGTTCATTGTACTTAGACAAGGGATGTGCCCGTAGC 29 2220524 0.757774811 7 26 191 0.948717949 1.267171728 0.153846154 0.172413793 0.384615385 29 1 1 37 2L:2220463-2220553 8 mio FBtr0077835 2220409 2220625 GTACTTAG 8mer-m1 dme-miR-252-5p 2L + 2220478 2220550 3'utr mio FlyBase G938.1 GATTTGTTCCAAACGCGTGCGCCTTAAACAAACTCAGAAGTGTTCATTGTACTTAGACAAGGGATGTGCCCGT 16 2220525 0.979047126 6 15 100 0.956521739 1.342422681 0.347826087 0.3125 0.52173913 16 1 0 22 2L:2220478-2220550 8 18.5 430 FBgn0031399 136 5.556666667 8.516666667 0.136029412 3.329334133 2.17221135 2 1 1.5 0.15 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 2230248 2230254 + 2L_2230248_2230254_+ 0.793255271 0.791659523 0.792457397 0.001128401 sau FBtr0100673|FBtr0077840 2230125|2230125 2231099|2231088 2L + 2230223 2230279 3'utr sau FlyBase G1218.2 TTGCTGCTTTTGTTTTAGAAACTTTGCTGTGAGTGGAACCGAATCGGGCGATAGGAT 393 2230246 0.736067226 8 377 2570 0.972457627 1.883661435 0.527542373 0.152671756 0.294491525 393 8 5 459 2L:2230223-2230279 7 sau FBtr0100674|FBtr0077840|FBtr0100673 2230125|2230125|2230125 2230413|2231088|2231099 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L + 2230188 2230299 3'utr sau FlyBase G953.1 AACACAGAAATACAGACCCACATCTGGAATACATTTTGCTGCTTTTGTTTTAGAAACTTTGCTGTGAGTGGAACCGAATCGGGCGATAGGATTTTCTTAAATGGCAACCACC 288 2230246 0.974789341 16 282 1886 0.967667436 1.844062773 0.51039261 0.361111111 0.575057737 288 9 5 419 2L:2230188-2230299 7 328 431 FBgn0267378 3863.503333 238.82 367.2833333 0.084897041 1.373419312 0.893043518 2 2 2 0.15 dme-miR-184-5p 6mer3-8 TGATAA 2L 2230630 2230635 + 2L_2230630_2230635_+ 0.999995861 0.999851699 0.99992378 0.000101965 sau FBtr0100673|FBtr0077840 2230125|2230125 2231099|2231088 2L + 2230620 2230661 3'utr sau FlyBase G1219.1 AAGAAAACTTTGATAAAGTCTGGGCAAGCTGCGTGCGATTGT 8 2230633 0.949137054 3 8 44 1 0.903089987 0.125 0 0 8 0 0 8 2L:2230620-2230661 6 sau FBtr0077840|FBtr0100673 2230125|2230125 2231088|2231099 TGATAA 6mer3-8 dme-miR-184-5p 2L + 2230621 2230649 3'utr sau FlyBase G955.1 AGAAAACTTTGATAAAGTCTGGGCAAGCT 5 2230632 0.724736941 2 3 25 0.666666667 0.77815125 0.333333333 0.4 0.666666667 5 3 0 6 2L:2230621-2230649 6 5.5 432 FBgn0267378 3863.503333 238.82 367.2833333 0.001423578 0.023029897 0.014974815 -3 -2 -2.5 0.15 dme-miR-1003-3p 7mer-A1 TGTGAGA 2L 2231425 2231431 - 2L_2231425_2231431_- 0.823348907 0.822823298 0.823086103 0.000371655 Sec24CD FBtr0329964 2231104 2232047 2L - 2231394 2231434 3'utr Sec24CD FlyBase G7001.1 TCGTGTGAGAATTACTCGACTTATATGGTATATTGCCCCTT 5 2231411 0.976544323 3 4 42 1 0.84509804 0.142857143 0.2 0.428571429 5 0 0 7 2L:2231394-2231434 7 Sec24CD FBtr0329964 2231104 2232047 TGTGAGA 7mer-A1 dme-miR-1003-3p 2L - 2231393 2231429 3'utr Sec24CD FlyBase G5488.1 TGAGAATTACTCGACTTATATGGTATATTGCCCCTTC 5 2231412 0.975355028 4 5 38 1 1 0.2 0.6 0.8 5 0 0 10 2L:2231393-2231429 5 3 433 FBgn0262126 1107.336667 30.21333333 46.15333333 0.002709203 0.09929391 0.065000722 -20 -19 -19.5 0.15 dme-miR-1008-3p 6mer3-8 AGCTGT 2L 2231884 2231889 - 2L_2231884_2231889_- 0.65124494 0.998945517 0.825095228 0.245861452 Sec24CD FBtr0329964|FBtr0077810 2231104|2231776 2232047|2232047 2L - 2231861 2232023 5'utr Sec24CD FlyBase G7002.1 AAGCCCGAGCAGCGATGGGCGGACAGTTATTCCCAAAACAGGGCTCGGATGCGTCGTCTGTCGTCCATGCGCAGTCGCCTCGGAAAATAAGAAATGCAAAGGGTTTAGGATCAGAAGCAGAAACTGGCGCTGAAAGCTGTTGGAACTTCAATTATATTTACAT 30 2231919 0.964289039 12 28 144 0.921052632 1.544068044 0.184210526 0.166666667 0.342105263 30 3 0 35 2L:2231861-2232023 6 Sec24CD FBtr0077810|FBtr0329964 2231776|2231104 2232047|2232047 AGCTGT 6mer3-8 dme-miR-1008-3p 2L - 2231851 2231974 5'utr Sec24CD FlyBase G5490.1 TGCGTCGTCTGTCGTCCATGCGCAGTCGCCTCGGAAAATAAGAAATGCAAAGGGTTTAGGATCAGAAGCAGAAACTGGCGCTGAAAGCTGTTGGAACTTCAATTATATTTACATCAAAATACAT 21 2231919 0.965847527 12 20 109 0.961538462 1.397940009 0.153846154 0.238095238 0.384615385 21 1 0 25 2L:2231851-2231974 6 10 434 FBgn0262126 1107.336667 30.21333333 46.15333333 0.009030677 0.3309797 0.216669074 30 30 30 0.15 dme-miR-263a-5p 6mer3-8 GTGCCA 2L 22368702 22368707 + 2L_22368702_22368707_+ 0.977138057 0.997475358 0.987306707 0.014380643 CG17018 FBtr0085956|FBtr0306235|FBtr0306236|FBtr0085957|FBtr0085958 22368442|22368442|22368442|22368442|22368442 22368776|22368796|22368776|22368776|22368776 2L + 22368628 22368757 3'utr CG17018 FlyBase G6130.1 ATATAAATGTTTTATAATGTCGAAGTATTGATTGTAAAGAAAATCAGGGATAGCAACTGGATCGGCCGTACTCAGTGCCAAAAGTTCTTACAAATCCACAAAATGTGTCGAATATATCTCTTTAAGGTCC 47 22368703 0.998130145 12 44 241 0.962962963 1.716003344 0.166666667 0.14893617 0.259259259 47 2 0 52 2L:22368628-22368757 6 CG17018 FBtr0085956|FBtr0085958|FBtr0085957|FBtr0306236|FBtr0306235 22368442|22368442|22368442|22368442|22368442 22368776|22368776|22368776|22368776|22368796 GTGCCA 6mer3-8 dme-miR-263a-5p 2L + 22368639 22368716 3'utr CG17018 FlyBase G4776.1 TTATAATGTCGAAGTATTGATTGTAAAGAAAATCAGGGATAGCAACTGGATCGGCCGTACTCAGTGCCAAAAGTTCTT 31 22368703 0.938385762 5 30 132 1 1.643452676 0.159090909 0.35483871 0.545454545 31 0 0 44 2L:22368639-22368716 6 26.5 435 FBgn0039972 1088.566667 27.93333333 43.30333333 0.024343939 0.948687351 0.611962128 -1 -1 -1 0.15 dme-bantam-3p 7mer-m8 TGATCTC 2L 22533675 22533681 - 2L_22533675_22533681_- 0.658254052 0.63599753 0.647125791 0.015737793 RpL5 FBtr0344793 22532277 22534868 2L - 22533592 22533705 3'utr RpL5 FlyBase G12384.1 ATCTAAACCTCTAATCGTGCAAACTGATCTCTTTCTGTACTATAAAGTTTAATTTTAATTTTGCGTAGCTAGAGATAGTTTTCGTTGAGCTGATGATCTCCTTTCTGTGCTAGA 43 22533673 0.817529416 13 41 376 0.958333333 1.662757832 0.375 0.11627907 0.208333333 43 2 0 46 2L:22533592-22533705 7 RpL5 FBtr0344793 22532277 22534868 TGATCTC 7mer-m8 dme-bantam-3p 2L - 22533591 22533693 3'utr RpL5 FlyBase G9489.1 AATCGTGCAAACTGATCTCTTTCTGTACTATAAAGTTTAATTTTAATTTTGCGTAGCTAGAGATAGTTTTCGTTGAGCTGATGATCTCCTTTCTGTGCTAGAT 34 22533674 0.988880417 14 32 301 0.941176471 1.681241237 0.352941176 0.294117647 0.529411765 34 3 0 48 2L:22533591-22533693 7 23 436 FBgn0064225 23918.45333 2812.8 4275.716667 0.000961601 0.008176906 0.005379215 -8 -7 -7.5 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 22534570 22534577 - 2L_22534570_22534577_- 0.482085927 0.482566604 0.482326265 0.000339906 RpL5 FBtr0344793|FBtr0332633 22532277|22533915 22534868|22534868 2L - 22534553 22534596 3'utr RpL5 FlyBase G12386.1 TGGTAAGATGGGAACTTGTGTACTTAATTCGGTTTCGGCCGCAG 33 22534578 0.740691695 6 31 310 0.972972973 1.556302501 0.432432432 0.121212121 0.216216216 33 1 0 36 2L:22534553-22534596 8 RpL5 FBtr0344793|FBtr0332633 22532277|22533915 22534868|22534868 GTACTTAA 8mer-A1 dme-miR-252-5p 2L - 22534525 22534596 3'utr RpL5 FlyBase G9490.1 TGGTAAGATGGGAACTTGTGTACTTAATTCGGTTTCGGCCGCAGTGGAACACTATTTCATCAATTCACTGCT 22 22534578 0.988479049 5 22 205 1 1.544068044 0.285714286 0.318181818 0.571428571 22 0 0 35 2L:22534525-22534596 8 26 437 FBgn0064225 23918.45333 2812.8 4275.716667 0.001087027 0.009243458 0.006080852 1 1 1 0.15 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2L 22540756 22540761 + 2L_22540756_22540761_+ 0.754933007 0.886926977 0.820929992 0.093333852 CG17490 FBtr0332629|FBtr0111259 22540487|22540487 22541293|22540900 2L + 22540727 22540762 5'utr CG17490 FlyBase G6140.1 CATCCCATCAGAACTATGCTATGTGATTTTTGAAGT 11 22540755 0.590841456 6 10 103 0.923076923 1.079181246 0.384615385 0.181818182 0.307692308 11 1 0 12 2L:22540727-22540762 6 CG17490 FBtr0111259|FBtr0332629 22540487|22540487 22540900|22541293 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2L + 22540732 22540809 5'utr CG17490 FlyBase G4785.1 CATCAGAACTATGCTATGTGATTTTTGAAGTAATAGCGCAAACATTGTTGTTGTCTGGACTTTAGATGATAAATCAAT 13 22540754 0.778974794 6 13 117 1 1.361727836 0.130434783 0.615384615 0.782608696 13 0 0 23 2L:22540732-22540809 6 9.5 438 FBgn0040009 384.5033333 18.73666667 28.78 0.024707198 0.507027219 0.330090341 1 2 1.5 0.15 dme-bantam-3p 6mer2-7 GATCTC 2L 22849162 22849167 + 2L_22849162_22849167_+ 0.811306958 0.901043421 0.856175189 0.063453217 CG17715 FBtr0111244|FBtr0111248 22849099|22849099 22850310|22850310 2L + 22849138 22849185 3'utr CG17715 FlyBase G6179.1 TATTACAGCAGCCGGACCATCATCGATCTCTTGTCGCAATGAAGGTAT 36 22849168 0.649552912 4 36 222 1 1.633468456 0.186046512 0.166666667 0.302325581 36 0 0 43 2L:22849138-22849185 6 CG17715 FBtr0111248|FBtr0111244 22849099|22849099 22850310|22850310 GATCTC 6mer2-7 dme-bantam-3p 2L + 22849141 22849187 3'utr CG17715 FlyBase G4821.1 TACAGCAGCCGGACCATCATCGATCTCTTGTCGCAATGAAGGTATCA 27 22849168 0.974960663 4 27 172 1 1.602059991 0.1 0.333333333 0.55 27 0 0 40 2L:22849141-22849187 6 31 439 FBgn0041004 1535.806667 93.98666667 143.51 0.020184832 0.329834019 0.216012821 -6 -6 -6 0.15 dme-miR-999-3p 7mer-A1 GTTAACA 2L 22849976 22849982 + 2L_22849976_22849982_+ 0.819914071 0.764458337 0.792186204 0.039213172 CG17715 FBtr0306550|FBtr0111245|FBtr0111246|FBtr0111244|FBtr0111248|FBtr0111247|FBtr0111249 22849802|22849802|22849802|22849099|22849099|22849802|22849802 22850310|22850310|22850310|22850310|22850310|22854208|22853034 2L + 22849915 22850003 3'utr CG17715 FlyBase G6181.1 AATTTGAATATGTATCAAATGTTTGTTAGGCAACTTAAAAAACGTACCAAAAGTATCTGAGGTTAACATATGCTCATCGGCGGTAATTT 17 22849972 0.957168219 8 17 109 1 1.342422681 0.136363636 0.294117647 0.454545455 17 0 0 22 2L:22849915-22850003 7 CG17715 FBtr0111246|FBtr0111245|FBtr0306550|FBtr0111249|FBtr0111247|FBtr0111248|FBtr0111244 22849802|22849802|22849802|22849802|22849802|22849099|22849099 22850310|22850310|22850310|22853034|22854208|22850310|22850310 GTTAACA 7mer-A1 dme-miR-999-3p 2L + 22849948 22849998 3'utr CG17715 FlyBase G4822.1 CTTAAAAAACGTACCAAAAGTATCTGAGGTTAACATATGCTCATCGGCGGT 18 22849972 0.963339674 3 17 92 1 1.397940009 0.2 0.333333333 0.52 18 0 0 25 2L:22849948-22849998 7 15 440 FBgn0041004 1535.806667 93.98666667 143.51 0.009766854 0.159597106 0.104522333 4 4 4 0.15 dme-miR-1003-3p 8mer-A1 ATGTGAGA 2L 22992406 22992413 + 2L_22992406_22992413_+ 0.635695473 0.623555031 0.629625252 0.00858463 cta FBtr0334157 22991942 22992951 2L + 22992380 22992456 3'utr cta FlyBase G6224.1 CGTTTTGAAAAGCCATTAACCAATTTATGTGAGATTTTAAAAGCAGCTGAAATATTTTTAAATGGTCGTTAAAAGTA 48 22992404 0.827311584 10 43 400 0.870967742 1.73239376 0.064516129 0.229166667 0.403225806 48 8 0 54 2L:22992380-22992456 8 cta FBtr0334157 22991942 22992951 ATGTGAGA 8mer-A1 dme-miR-1003-3p 2L + 22992365 22992456 3'utr cta FlyBase G4851.1 TTTTGCGTGCATCTTCGTTTTGAAAAGCCATTAACCAATTTATGTGAGATTTTAAAAGCAGCTGAAATATTTTTAAATGGTCGTTAAAAGTA 41 22992404 0.988034305 15 38 348 0.901639344 1.740362689 0.098360656 0.390243902 0.590163934 41 6 0 55 2L:22992365-22992456 8 37 441 FBgn0000384 1592.86 81.62333333 124.9 0.023228658 0.453301752 0.29623699 2 2 2 0.15 dme-miR-1008-3p 6mer2-7 GCTGTG 2L 22992592 22992597 + 2L_22992592_22992597_+ 0.826143495 0.843874779 0.835009137 0.012537922 cta FBtr0334157 22991942 22992951 2L + 22992559 22992629 3'utr cta FlyBase G6226.1 CGTAGGCGTTTTCGTTTTAAGAAGCTAATCACCGCTGTGCGTCAAATTTAAAAAGCAGCAGACACTTTTTT 46 22992594 0.972239392 3 46 275 1 1.707570176 0.058823529 0.108695652 0.196078431 46 0 0 51 2L:22992559-22992629 6 cta FBtr0334157 22991942 22992951 GCTGTG 6mer2-7 dme-miR-1008-3p 2L + 22992561 22992613 3'utr cta FlyBase G4852.1 TAGGCGTTTTCGTTTTAAGAAGCTAATCACCGCTGTGCGTCAAATTTAAAAAG 35 22992594 0.972851584 3 34 208 1 1.643452676 0.022727273 0.228571429 0.386363636 35 0 0 44 2L:22992561-22992613 6 38.5 442 FBgn0000384 1592.86 81.62333333 124.9 0.02417036 0.47167885 0.308246597 -2 -2 -2 0.15 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 22992669 22992674 + 2L_22992669_22992674_+ 0.999991402 0.999668458 0.99982993 0.000228325 cta FBtr0334157 22991942 22992951 2L + 22992652 22992719 3'utr cta FlyBase G6227.1 CGACTTCTAATGGAATGATGTGACTGTATACCACACTTTAAAACGGATTTAAAATAAATTAAAAAATT 18 22992670 0.970685795 8 18 116 1 1.342422681 0.045454545 0.222222222 0.363636364 18 0 0 22 2L:22992652-22992719 6 cta FBtr0334157 22991942 22992951 ATGTGA 6mer3-8 dme-miR-1003-3p 2L + 22992649 22992684 3'utr cta FlyBase G4853.1 TATCGACTTCTAATGGAATGATGTGACTGTATACCA 7 22992670 0.967233462 3 7 43 1 1.176091259 0 0.428571429 0.733333333 7 0 0 15 2L:22992649-22992684 6 11 443 FBgn0000384 1592.86 81.62333333 124.9 0.006905817 0.134765386 0.088070456 -1 -1 -1 0.15 dme-miR-1006-3p 7mer-A1 GAATTTA 2L 22992850 22992856 + 2L_22992850_22992856_+ 0.647110386 0.665456586 0.656283486 0.012972722 cta FBtr0334157 22991942 22992951 2L + 22992822 22992862 3'utr cta FlyBase G6228.1 ATATCATGTGCAACACAGAAAATACACGGAATTTATACCTA 12 22992844 0.947224235 3 11 52 0.923076923 1.079181246 0.076923077 0.083333333 0.153846154 12 1 0 12 2L:22992822-22992862 7 cta FBtr0334157 22991942 22992951 GAATTTA 7mer-A1 dme-miR-1006-3p 2L + 22992828 22992871 3'utr cta FlyBase G4854.1 TGTGCAACACAGAAAATACACGGAATTTATACCTACTAAGAATG 11 22992844 0.978373613 3 10 51 1 1.176091259 0.2 0.272727273 0.466666667 11 0 0 15 2L:22992828-22992871 7 11 444 FBgn0000384 1592.86 81.62333333 124.9 0.006905817 0.134765386 0.088070456 6 6 6 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2L 23161222 23161228 - 2L_23161222_23161228_- 0.671795929 0.658412453 0.665104191 0.009463493 CG12567 FBtr0300704|FBtr0113705|FBtr0300703|FBtr0300702|FBtr0344847|FBtr0113704 23161120|23161120|23161120|23161120|23161120|23161120 23161957|23162856|23162903|23161957|23161957|23161957 2L - 23161167 23161246 3'utr CG12567 FlyBase G12434.1 CTTTTAATATATGTAGTAACCAAAGTGCTCAAAATTAAGAGATACATTATAGGTAGGATAATGTTACTTATGTACATTTT 14 23161221 0.985153247 7 14 110 1 1.176091259 0 0.071428571 0.133333333 14 0 0 15 2L:23161167-23161246 7 CG12567 FBtr0300702|FBtr0300703|FBtr0113705|FBtr0300704|FBtr0113704|FBtr0344847 23161120|23161120|23161120|23161120|23161120|23161120 23161957|23162903|23162856|23161957|23161957|23161957 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 23161206 23161238 3'utr CG12567 FlyBase G9526.1 ATATGTAGTAACCAAAGTGCTCAAAATTAAGAG 5 23161220 0.744184911 4 5 19 1 0.698970004 0 0 0 5 0 0 5 2L:23161206-23161238 7 7 445 FBgn0039958 1066.65 65.05666667 99.82333333 0.006562603 0.107598504 0.070123886 -7 -8 -7.5 0.15 dme-miR-1008-3p 8mer-A1 AGCTGTGA 2L 23161633 23161640 - 2L_23161633_23161640_- 0.633580291 0.626694333 0.630137312 0.004869137 CG12567 FBtr0300704|FBtr0113705|FBtr0300703|FBtr0300702|FBtr0344847|FBtr0113704 23161120|23161120|23161120|23161120|23161120|23161120 23161957|23162856|23162903|23161957|23161957|23161957 2L - 23161532 23161677 3'utr CG12567 FlyBase G12436.2 AATTATCAAATATCACTTCATTGTGTAGTCTACTAACAGCTGTGAAGAGTTTGTAATGCACTTAGAATTTTAAAAGTAGTGTTGAGCTGGTTTGTATTTGAATAATGAACAAAATAATGACAAATTCTAAAATTCTGCTAAAAAAT 70 23161646 0.92462623 24 63 495 0.905882353 1.284430734 0.294117647 0.185714286 0.329411765 70 5 3 77 2L:23161532-23161677 8 CG12567 FBtr0300702|FBtr0300703|FBtr0113705|FBtr0300704|FBtr0113704|FBtr0344847 23161120|23161120|23161120|23161120|23161120|23161120 23161957|23162903|23162856|23161957|23161957|23161957 AGCTGTGA 8mer-A1 dme-miR-1008-3p 2L - 23161619 23161723 3'utr CG12567 FlyBase G9529.3 TTTTATTTCACAATATCGGTCAGCATTAAGAAGTAAAATTATTACAAATTATCAAATATCACTTCATTGTGTAGTCTACTAACAGCTGTGAAGAGTTTGTAATGC 70 23161646 0.865760245 14 65 399 0.948717949 1.568201724 0.162393162 0.471428571 0.683760684 70 4 2 111 2L:23161619-23161723 8 41.5 446 FBgn0039958 1066.65 65.05666667 99.82333333 0.038906858 0.637905416 0.415734464 6 6 6 0.15 dme-miR-31a-5p 8mer-A1 TCTTGCCA 2L 23162033 23162040 - 2L_23162033_23162040_- 0.630533005 0.629691156 0.63011208 0.000595242 CG12567 FBtr0113705|FBtr0300703 23161120|23161120 23162856|23162903 2L - 23161998 23162083 3'utr CG12567 FlyBase G12439.1 ACGTACAAGACACGCTTTGAGCAATCCATAAAACAACCTCAATTCTTGCCAGGTGATTCCAAAAACTGTAACTGTGCAATATTTCA 48 23162041 0.79079679 7 46 260 0.981481481 1.423245874 0.018518519 0.083333333 0.185185185 48 0 1 53 2L:23161998-23162083 8 CG12567 FBtr0300703|FBtr0113705 23161120|23161120 23162903|23162856 TCTTGCCA 8mer-A1 dme-miR-31a-5p 2L - 23162000 23162082 3'utr CG12567 FlyBase G9531.1 CGTACAAGACACGCTTTGAGCAATCCATAAAACAACCTCAATTCTTGCCAGGTGATTCCAAAAACTGTAACTGTGCAATATTT 40 23162041 0.968761512 5 39 216 1 1.799340549 0.031746032 0.375 0.603174603 40 0 0 63 2L:23162000-23162082 8 38 447 FBgn0039958 1066.65 65.05666667 99.82333333 0.035625557 0.584106164 0.380672521 1 1 1 0.15 dme-miR-305-3p 6mer2-7 TGTGCC 2L 23162361 23162366 - 2L_23162361_23162366_- 0.951967842 0.973262376 0.962615109 0.015057556 CG12567 FBtr0113705|FBtr0300703 23161120|23161120 23162856|23162903 2L - 23162315 23162434 5'utr CG12567 FlyBase G12442.1 TTTGAAAGCCGACAAGGACTTTTTCCCAATACCGAATATGTTTTCGACTTAGAGCTACCACTTGACTTTGTGCCTCAAAACGCTGACGGGGAGGTCCAGGCCTTTGAGCTGCTAACAGCC 60 23162366 0.840406626 14 59 416 0.987012987 1.880813592 0.116883117 0.233333333 0.402597403 60 1 0 76 2L:23162315-23162434 6 CG12567 FBtr0300703|FBtr0113705 23161120|23161120 23162903|23162856 TGTGCC 6mer2-7 dme-miR-305-3p 2L - 23162323 23162393 5'utr CG12567 FlyBase G9532.1 TTTCGACTTAGAGCTACCACTTGACTTTGTGCCTCAAAACGCTGACGGGGAGGTCCAGGCCTTTGAGCTGC 27 23162366 0.980996732 6 27 193 1 1.653212514 0.155555556 0.333333333 0.6 27 0 0 45 2L:23162323-23162393 6 34.5 448 FBgn0039958 1066.65 65.05666667 99.82333333 0.032344255 0.530306912 0.345610579 0 0 0 0.15 dme-miR-184-5p 6mer3-8 TGATAA 2L 2360349 2360354 - 2L_2360349_2360354_- 0.925196732 0.939421201 0.932308966 0.01005824 Rab5 FBtr0330670|FBtr0077797|FBtr0077793|FBtr0077796|FBtr0330668|FBtr0077794|FBtr0077798|FBtr0077795|FBtr0330669 2359564|2359140|2359564|2359140|2359564|2359564|2359564|2359564|2359564 2360468|2360468|2360468|2360468|2360468|2360468|2360468|2360468|2360468 2L - 2360332 2360395 intron-3'utr Rab5 FlyBase G7031.1 AGAAAATGAAATTTCCAACGAGAGATTTGAAAAGTTTATGCTGATAATTATAAATAAAAAAATT 69 2360358 0.705093441 9 67 590 0.974683544 1.886490725 0.17721519 0.101449275 0.215189873 69 2 0 77 2L:2360332-2360395 6 Rab5 FBtr0330668|FBtr0077794|FBtr0077795|FBtr0077798|FBtr0330669|FBtr0330670|FBtr0077797|FBtr0077793|FBtr0077796 2359564|2359564|2359564|2359564|2359564|2359564|2359140|2359564|2359140 2360468|2360468|2360468|2360468|2360468|2360468|2360468|2360468|2360468 TGATAA 6mer3-8 dme-miR-184-5p 2L - 2360335 2360389 3'utr Rab5 FlyBase G5515.1 TGAAATTTCCAACGAGAGATTTGAAAAGTTTATGCTGATAATTATAAATAAAAAA 49 2360358 0.702205175 9 43 416 0.894736842 1.531478917 0.223684211 0.408163265 0.618421053 49 7 1 68 2L:2360335-2360389 6 53 449 FBgn0014010 2481.693333 154.6633333 236.7366667 0.021356386 0.342679799 0.223877445 4 4 4 0.15 dme-miR-276a-3p 6mer3-8 AGTTCC 2L 2369659 2369664 + 2L_2369659_2369664_+ 0.999209436 0.995153358 0.997181397 0.002868025 Axud1 FBtr0077762|FBtr0330666|FBtr0330665|FBtr0077763 2368980|2368980|2368980|2368980 2370137|2370137|2370137|2370137 2L + 2369542 2369682 3'utr Axud1 FlyBase G1229.1 AATCGGACTCAAGTCGCCTTGTATAAATCATTTTATTGTTAAATTCGAGTTAGTCTCTAAGTACATACTGTAGTTTAGTTACTTTGTTGCTTAAGTTAAGTTCACTTCGCAAAATCAAGTTCCCTTCCTACTCAACTTTAA 20 2369661 0.990769375 10 16 170 0.833333333 1 0.041666667 0.15 0.291666667 20 3 1 20 2L:2369542-2369682 6 Axud1 FBtr0077763|FBtr0330665|FBtr0330666|FBtr0077762 2368980|2368980|2368980|2368980 2370137|2370137|2370137|2370137 AGTTCC 6mer3-8 dme-miR-276a-3p 2L + 2369630 2369676 3'utr Axud1 FlyBase G962.1 GCTTAAGTTAAGTTCACTTCGCAAAATCAAGTTCCCTTCCTACTCAA 6 2369661 0.969950406 3 6 36 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 2L:2369630-2369676 6 8 450 FBgn0261647 491.4533333 14.28 22 0.01627825 0.56022409 0.363636364 -2 -2 -2 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2L 2422637 2422642 + 2L_2422637_2422642_+ 0.93637492 0.782669495 0.859522207 0.108686131 CG9886 FBtr0077770|FBtr0077770|FBtr0077770|FBtr0335462|FBtr0335462|FBtr0335462 2422414|2422414|2422414|2422414|2422414|2422414 2422910|2422910|2422910|2424647|2424647|2424647 2L + 2422622 2422648 3'utr CG9886 FlyBase G1241.1 AAATTCAAATAATTTTGTGATCTTTAT 5 2422635 0.798768526 4 5 49 1 0.698970004 0 0 0 5 0 0 5 2L:2422622-2422648 6 CG9886 FBtr0077770|FBtr0077770|FBtr0077770|FBtr0335462|FBtr0335462|FBtr0335462 2422414|2422414|2422414|2422414|2422414|2422414 2422910|2422910|2422910|2424647|2424647|2424647 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 2422626 2422656 3'utr CG9886 FlyBase G971.1 TCAAATAATTTTGTGATCTTTATGCTCTGAG 5 2422636 0.685291148 3 4 49 0.857142857 0.77815125 0.857142857 0.4 0.571428571 5 1 0 6 2L:2422626-2422656 6 4.5 451 FBgn0031428 49.66666667 2.643333333 4.073333333 0.090604027 1.702395965 1.104746318 2 1 1.5 0.15 dme-miR-79-3p 7mer-m8 TAGCTTT 2L 2422688 2422694 + 2L_2422688_2422694_+ 0.618439539 0.619757393 0.619098466 0.000931896 CG9886 FBtr0077770|FBtr0335462 2422414|2422414 2422910|2424647 2L + 2422668 2422706 3'utr CG9886 FlyBase G1242.1 TGACAGCATAAAACGGCAATTAGCTTTCGTCTCCGGTTA 6 2422687 0.980892215 2 6 46 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 2L:2422668-2422706 7 CG9886 FBtr0077770|FBtr0335462 2422414|2422414 2422910|2424647 TAGCTTT 7mer-m8 dme-miR-79-3p 2L + 2422677 2422702 3'utr CG9886 FlyBase G972.1 AAAACGGCAATTAGCTTTCGTCTCCG 5 2422687 0.943960656 2 5 30 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 2L:2422677-2422702 7 5.5 452 FBgn0031428 49.66666667 2.643333333 4.073333333 0.110738255 2.080706179 1.350245499 1 1 1 0.15 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 2497415 2497422 + 2L_2497415_2497422_+ 0.62481047 0.624927758 0.624869114 8.29E-05 oaf FBtr0077777|FBtr0077780|FBtr0077778 2496696|2497161|2496696 2498846|2498846|2498454 2L + 2497304 2497462 3'utr oaf FlyBase G1249.1 TATACTACAGCAAAAAAGGAGTAAAACGAAATAAATGTAAAAAAGTGCTTCTGTATACTATGTATATATATGTATATTTAACGATGATTAGCTTTTAGCCAGCTTACGTTTTACGCTTATGCCGGATTTAAGTTTAGACCTAGATTAGGTGTCCTTATT 46 2497391 0.989282309 15 44 412 0.962962963 1.716003344 0.240740741 0.152173913 0.277777778 46 2 0 52 2L:2497304-2497462 8 oaf FBtr0077780|FBtr0077778|FBtr0077777 2497161|2496696|2496696 2498846|2498454|2498846 TACGCTTA 8mer-A1 dme-miR-965-3p 2L + 2497373 2497467 3'utr oaf FlyBase G976.1 ATGTATATTTAACGATGATTAGCTTTTAGCCAGCTTACGTTTTACGCTTATGCCGGATTTAAGTTTAGACCTAGATTAGGTGTCCTTATTTAATT 21 2497414 0.988198333 6 20 189 0.970588235 1.217483944 0.411764706 0.428571429 0.647058824 21 0 1 33 2L:2497373-2497467 8 17 453 FBgn0011818 255.6 10.51666667 16.17333333 0.066510172 1.616481775 1.051112943 24 1 12.5 0.15 dme-bantam-3p 6mer3-8 TGATCT 2L 2497552 2497557 + 2L_2497552_2497557_+ 0.529010806 0.617323347 0.573167076 0.062446368 oaf FBtr0077777|FBtr0077780|FBtr0077778 2496696|2497161|2496696 2498846|2498846|2498454 2L + 2497534 2497563 3'utr oaf FlyBase G1250.1 TCCTTTCCTACTACAGTGTGATCTTTTATC 10 2497545 0.769796121 5 10 88 1 1.176091259 0 0.3 0.533333333 10 0 0 15 2L:2497534-2497563 6 oaf FBtr0077780|FBtr0077778|FBtr0077777 2497161|2496696|2496696 2498846|2498454|2498846 TGATCT 6mer3-8 dme-bantam-3p 2L + 2497531 2497563 3'utr oaf FlyBase G977.1 TAATCCTTTCCTACTACAGTGTGATCTTTTATC 9 2497546 0.782081952 4 9 97 1 1.113943352 0 0.444444444 0.615384615 9 0 0 13 2L:2497531-2497563 6 9.5 454 FBgn0011818 255.6 10.51666667 16.17333333 0.037167449 0.903328051 0.587386645 7 6 6.5 0.15 dme-miR-932-5p 6mer3-8 GGAATT 2L 2498090 2498095 + 2L_2498090_2498095_+ 0.988275092 0.971753297 0.980014194 0.011682677 oaf FBtr0077777|FBtr0077780|FBtr0077778 2496696|2497161|2496696 2498846|2498846|2498454 2L + 2498041 2498111 3'utr oaf FlyBase G1253.1 ATTCATTGAACTAAGGAATATGTATGTATGTCAGGCGTTGGCAAAACTCGGAATTAATTGTGCTCATAATA 6 2498098 0.973158993 5 6 40 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 2L:2498041-2498111 6 oaf FBtr0077780|FBtr0077778|FBtr0077777 2497161|2496696|2496696 2498846|2498454|2498846 GGAATT 6mer3-8 dme-miR-932-5p 2L + 2498047 2498111 3'utr oaf FlyBase G980.1 TGAACTAAGGAATATGTATGTATGTCAGGCGTTGGCAAAACTCGGAATTAATTGTGCTCATAATA 10 2498098 0.984050599 4 9 69 0.923076923 0.77815125 0 0.3 0.461538462 10 0 1 12 2L:2498047-2498111 6 6 455 FBgn0011818 255.6 10.51666667 16.17333333 0.023474178 0.570522979 0.370981039 -8 -8 -8 0.15 dme-bantam-3p 6mer3-8 TGATCT 2L 2498712 2498717 + 2L_2498712_2498717_+ 0.726531825 0.817044367 0.771788096 0.064002073 oaf FBtr0077777|FBtr0077780 2496696|2497161 2498846|2498846 2L + 2498692 2498754 3'utr oaf FlyBase G1256.1 TTAAAACTGGTAAGACTCGATGATCTGAATTGTGTGAATAGCATTTGCCAATATTAACGATTA 104 2498712 0.812186062 7 102 642 0.991935484 2.089905111 0.290322581 0.163461538 0.298387097 104 1 0 123 2L:2498692-2498754 6 oaf FBtr0077780|FBtr0077777 2497161|2496696 2498846|2498846 TGATCT 6mer3-8 dme-bantam-3p 2L + 2498689 2498737 3'utr oaf FlyBase G981.1 CATTTAAAACTGGTAAGACTCGATGATCTGAATTGTGTGAATAGCATTT 74 2498712 0.823319657 5 73 463 0.98245614 1.572096768 0.289473684 0.337837838 0.570175439 74 0 2 112 2L:2498689-2498737 6 88 456 FBgn0011818 255.6 10.51666667 16.17333333 0.34428795 8.367670365 5.441055235 0 0 0 0.15 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 2L 2739561 2739566 + 2L_2739561_2739566_+ 0.612428503 0.410694042 0.511561272 0.142647833 CG31689 FBtr0077707|FBtr0077707|FBtr0334158|FBtr0334158|FBtr0077708|FBtr0077708|FBtr0077705|FBtr0077705|FBtr0077706|FBtr0077706|FBtr0334160|FBtr0334160|FBtr0334159|FBtr0334159|FBtr0334161|FBtr0334161 2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499 2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830 2L + 2739508 2739574 3'utr CG31689 FlyBase G1276.1 GGGGGGGGGGCTTTTAGTATTCGGCTTAATTTGAATCGAATGTGATTTTATGTTACTTATGTATGTA 75 2739555 0.991187463 12 71 749 0.93877551 1.361727836 0.387755102 0.24 0.418367347 75 3 3 92 2L:2739508-2739574 6 CG31689 FBtr0077705|FBtr0077705|FBtr0077708|FBtr0077708|FBtr0334158|FBtr0334158|FBtr0077707|FBtr0077707|FBtr0334161|FBtr0334161|FBtr0334159|FBtr0334159|FBtr0334160|FBtr0334160|FBtr0077706|FBtr0077706 2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499 2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 2L + 2739487 2739577 stop_codon CG31689 FlyBase G996.1 TCAAGACGAACTGATGGGGGGGGGGGGGGGGCTTTTAGTATTCGGCTTAATTTGAATCGAATGTGATTTTATGTTACTTATGTATGTATGT 51 2739555 0.988316846 12 46 487 0.890410959 0.967815317 0.315068493 0.333333333 0.534246575 51 2 6 65 2L:2739487-2739577 6 25.5 457 FBgn0031449 1015.49 47.98666667 73.49333333 0.02511103 0.53139761 0.346970247 6 6 6 0.15 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2L 2756584 2756589 + 2L_2756584_2756589_+ 0.977832993 0.908467532 0.943150262 0.049048815 Bacc FBtr0307080|FBtr0335125 2756293|2756293 2757975|2757920 2L + 2756543 2756774 5'utr-coding Bacc FlyBase G1300.2 ACTTTTTTTATAAAAAACTACAAAACAAACAAAAATTGTAATTGAAGGCATTTTCGTATAAACGCAACCTATACGGAATCCAACAAAAAGTAAACATCCCCACTATATACAAGAACAAAACAAAACCAAAATCTTTCTTTCCTTTATCTCATAAGTCCTAATTTAAACGCCCAGTTGATGCGTAAACCAAGATATACAAAGATTTCAAATGTAGCGTAAACGAAGCCCGCGA 111 2756578 0.970383919 30 99 603 0.911764706 1.61630043 0.147058824 0.216216216 0.360294118 111 10 2 124 2L:2756543-2756774 6 Bacc FBtr0307080|FBtr0335125 2756293|2756293 2757975|2757920 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2L + 2756526 2756662 5'utr Bacc FlyBase G1011.1 AATTGTATTTTATGTGTACTTTTTTTATAAAAAACTACAAAACAAACAAAAATTGTAATTGAAGGCATTTTCGTATAAACGCAACCTATACGGAATCCAACAAAAAGTAAACATCCCCACTATATACAAGAACAAAA 53 2756578 0.967969085 18 47 264 0.911392405 1.857332496 0.253164557 0.396226415 0.594936709 53 7 0 72 2L:2756526-2756662 6 34.5 458 FBgn0031453 6284.453333 781.6066667 1192.22 0.005489738 0.044139849 0.028937612 6 6 6 0.15 dme-miR-8-3p 8mer-A1 CAGTATTA 2L 2757260 2757267 + 2L_2757260_2757267_+ 0.66688575 0.667232571 0.667059161 0.000245225 Bacc FBtr0307080|FBtr0335125 2756293|2756293 2757975|2757920 2L + 2757236 2757330 5'utr Bacc FlyBase G1304.1 ATGACTAATCTTAAGTACTTATGTCAGTATTAAAGCGAGGGCTTTATTATTCTGTTGATAAGTTGTGCGAGCGAGTCGTTGATAAGCCTAATTCA 217 2757257 0.858738949 9 214 1930 0.987234043 2.365487985 0.370212766 0.069124424 0.140425532 217 3 0 232 2L:2757236-2757330 8 Bacc FBtr0307080|FBtr0335125 2756293|2756293 2757975|2757920 CAGTATTA 8mer-A1 dme-miR-8-3p 2L + 2757236 2757329 5'utr Bacc FlyBase G1014.1 ATGACTAATCTTAAGTACTTATGTCAGTATTAAAGCGAGGGCTTTATTATTCTGTTGATAAGTTGTGCGAGCGAGTCGTTGATAAGCCTAATTC 113 2757257 0.867345377 14 105 951 0.943396226 1.875061263 0.402515723 0.309734513 0.509433962 113 8 1 150 2L:2757236-2757329 8 144.5 459 FBgn0031453 6284.453333 781.6066667 1192.22 0.022993249 0.184875598 0.121202463 3 3 3 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 2L 2763587 2763593 - 2L_2763587_2763593_- 0.521223852 0.52122383 0.521223841 7.07E-08 CG3077 FBtr0335129 2763414 2764305 2L - 2763565 2763609 3'utr CG3077 FlyBase G7083.1 TTCCAGCCCAATGTCTTGTGATTGCTTTTTCAATAAATAAATATT 58 2763594 0.601201452 6 54 474 0.941176471 1.329058719 0.029411765 0.155172414 0.279411765 58 2 2 64 2L:2763565-2763609 7 CG3077 FBtr0335129 2763414 2764305 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 2763555 2763611 3'utr CG3077 FlyBase G5559.1 TCTTCCAGCCCAATGTCTTGTGATTGCTTTTTCAATAAATAAATATTATACTCAAGT 35 2763594 0.986368474 7 34 284 0.961538462 1.22184875 0.038461538 0.428571429 0.615384615 35 0 2 50 2L:2763555-2763611 7 44.5 460 FBgn0031457 325.67 20.19 30.60333333 0.136641385 2.204061417 1.454089968 1 1 1 0.15 dme-miR-283-5p 6mer3-8 TGATAT 2L 2763811 2763816 - 2L_2763811_2763816_- 0.996859719 0.994550885 0.995705302 0.001632568 CG3077 FBtr0335129 2763414 2764305 2L - 2763784 2763838 3'utr CG3077 FlyBase G7084.1 ATGTTTCATGTTACGTATTGTTTGATATCTCTTCAATCGTCTAGTTTGTAGTTTG 11 2763828 0.816704759 5 9 122 0.769230769 1 0.076923077 0.181818182 0.307692308 11 3 0 10 2L:2763784-2763838 6 CG3077 FBtr0335129 2763414 2764305 TGATAT 6mer3-8 dme-miR-283-5p 2L - 2763764 2763884 3'utr CG3077 FlyBase G5560.1 CGTAACGTACTGCTTTGGTAACTTAAAGGTTAGTCTAAGCATATTTATGTTTCATGTTACGTATTGTTTGATATCTCTTCAATCGTCTAGTTTGTAGTTTGTACCCAGTGGGAGTTGTGAT 18 2763817 0.992229097 11 14 171 0.884615385 1.361727836 0.269230769 0.333333333 0.538461538 18 3 0 23 2L:2763764-2763884 6 6.5 461 FBgn0031457 325.67 20.19 30.60333333 0.019958854 0.321941555 0.212395164 12 1 6.5 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 2811983 2811990 + 2L_2811983_2811990_+ 0.495905121 0.495809137 0.495857129 6.79E-05 daw FBtr0077720|FBtr0077721|FBtr0335151 2811758|2811758|2811758 2812145|2812145|2812376 2L + 2811906 2812042 3'utr daw FlyBase G1341.1 ATTAGCGTTGTCATTTAATCGTAGTTACCTGTAGTGCCTGAGCTGCCACTAGTTGATAGTTAAAAGCTAAAGTCAATGTACTTAAGCTCTCGAAGTATGTAGGTAGTTAGCCAATGGCTTCAATTAATTTAATAGCT 1340 2811982 0.830240232 34 1281 9622 0.956386293 2.072165028 0.251713396 0.163432836 0.301557632 1340 58 12 1535 2L:2811906-2812042 8 daw FBtr0335151|FBtr0077720|FBtr0077721 2811758|2811758|2811758 2812376|2812145|2812145 GTACTTAA 8mer-A1 dme-miR-252-5p 2L + 2811900 2812040 3'utr daw FlyBase G1042.1 ATTTACATTAGCGTTGTCATTTAATCGTAGTTACCTGTAGTGCCTGAGCTGCCACTAGTTGATAGTTAAAAGCTAAAGTCAATGTACTTAAGCTCTCGAAGTATGTAGGTAGTTAGCCAATGGCTTCAATTAATTTAATAG 935 2811982 0.954507947 31 891 6677 0.953058321 1.848351197 0.280227596 0.351871658 0.568990043 935 48 18 1340 2L:2811900-2812040 8 799 462 FBgn0031461 129.3333333 5.623333333 8.523333333 6.177835052 142.0865442 93.74266719 1 1 1 0.15 dme-miR-12-5p 8mer-A1 AATACTCA 2L 281843 281850 + 2L_281843_281850_+ 0.628596544 0.643730158 0.636163351 0.010701142 smo FBtr0078129 281513 282167 2L + 281799 281872 3'utr smo FlyBase G662.1 CGATTACTGGAACAGACTGAGCGAAACTAGAACTACGAATTACGAATACTCATAGTCATTAGGCTGCAACTTTA 26 281857 0.726756547 10 24 165 0.84375 1.431363764 0.125 0.153846154 0.3125 26 5 0 27 2L:281799-281872 8 smo FBtr0078129 281513 282167 AATACTCA 8mer-A1 dme-miR-12-5p 2L + 281833 281870 3'utr smo FlyBase G532.1 ACGAATTACGAATACTCATAGTCATTAGGCTGCAACTT 13 281856 0.624053993 5 13 81 1 1.278753601 0.157894737 0.307692308 0.526315789 13 0 0 19 2L:281833-281870 8 17 463 FBgn0003444 542.8533333 16.28333333 24.88333333 0.031316009 1.044012282 0.683188212 -14 -13 -13.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 2868509 2868515 + 2L_2868509_2868515_+ 0.800786817 0.800822097 0.800804457 2.50E-05 CG2991 FBtr0077626|FBtr0077626|FBtr0077626|FBtr0077627|FBtr0077627|FBtr0077627|FBtr0077625|FBtr0077625|FBtr0077625 2867666|2867666|2867666|2867666|2867666|2867666|2867666|2867666|2867666 2868548|2868548|2868548|2868548|2868548|2868548|2868548|2868548|2868548 2L + 2868322 2868534 3'utr CG2991 FlyBase G1368.1 AAGTTTACTCCTTAAGAAACTGATTTGTATAAGCTGCGCCCATATATACATACACACGAACATATATAATATATATATATAAATTTTATTGTAGTTACTACACAAAATTTGTCAAAGCAAAGAAAAACAAAACAAAATCCACAAAAGGAAAGAATCCAACATACAATTTAAGTTACCATACAATTTTTGTGATAAAACTAACAAATAAAATAC 236 2868507 0.999997792 26 221 1812 0.940972222 1.65481804 0.038194444 0.177966102 0.326388889 236 12 5 271 2L:2868322-2868534 7 CG2991 FBtr0077627|FBtr0077627|FBtr0077627|FBtr0077625|FBtr0077625|FBtr0077625|FBtr0077626|FBtr0077626|FBtr0077626 2867666|2867666|2867666|2867666|2867666|2867666|2867666|2867666|2867666 2868548|2868548|2868548|2868548|2868548|2868548|2868548|2868548|2868548 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 2868490 2868533 3'utr CG2991 FlyBase G1072.1 TAAGTTACCATACAATTTTTGTGATAAAACTAACAAATAAAATA 112 2868507 0.651175358 8 108 917 0.95483871 1.693140461 0 0.276785714 0.477419355 112 5 2 148 2L:2868490-2868533 7 146.5 464 FBgn0031474 1557.266667 62.85666667 96.35333333 0.094075089 2.330699475 1.520445582 2 2 2 0.15 dme-miR-190-5p 6mer3-8 ACATAT 2L 2868670 2868675 - 2L_2868670_2868675_- 0.999999663 1 0.999999831 2.12E-07 CG31694 FBtr0077685 2868625 2869170 2L - 2868648 2868724 3'utr CG31694 FlyBase G7116.1 TCATAACTTGACATGGCTTTTAATACGCATAATAAGCGGCTCTATGAATACATATATTTTGTAGTAAATAAGTGTAA 14 2868702 0.900111063 7 12 126 0.75 1.079181246 0.0625 0.071428571 0.1875 14 4 0 12 2L:2868648-2868724 6 CG31694 FBtr0077685 2868625 2869170 ACATAT 6mer3-8 dme-miR-190-5p 2L - 2868651 2868702 3'utr CG31694 FlyBase G5583.1 ATACGCATAATAAGCGGCTCTATGAATACATATATTTTGTAGTAAATAAGTG 6 2868669 0.98745762 6 6 39 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2L:2868651-2868702 6 4.5 465 FBgn0051694 1042 47.93 73.36 0.004318618 0.093886918 0.06134133 27 -6 10.5 0.15 dme-miR-965-3p 7mer-m8 TACGCTT 2L 2868815 2868821 - 2L_2868815_2868821_- 0.609469486 0.591225529 0.600347507 0.012900456 CG31694 FBtr0077685 2868625 2869170 2L - 2868733 2868859 3'utr CG31694 FlyBase G7117.1 GAATTTAAATTAACACTGCGATTGTTACGACTGGCATTTACGCTTTGCGATTTGGGTTAACCTCTTTTGTTGTTGATCTTTTTAAATTACAAGCGTAGGAAAACATAGTCTGCTTTAATGCTGCGAA 128 2868837 0.747326193 32 126 1043 0.9875 2.198657087 0.2375 0.1875 0.35 128 2 0 158 2L:2868733-2868859 7 CG31694 FBtr0077685 2868625 2869170 TACGCTT 7mer-m8 dme-miR-965-3p 2L - 2868724 2868855 3'utr CG31694 FlyBase G5584.1 TTAAATTAACACTGCGATTGTTACGACTGGCATTTACGCTTTGCGATTTGGGTTAACCTCTTTTGTTGTTGATCTTTTTAAATTACAAGCGTAGGAAAACATAGTCTGCTTTAATGCTGCGAAAAAGTTATT 99 2868837 0.780898553 23 92 734 0.938650307 1.707570176 0.263803681 0.454545455 0.668711656 99 8 2 153 2L:2868724-2868855 7 40 466 FBgn0051694 1042 47.93 73.36 0.038387716 0.834550386 0.54525627 16 16 16 0.15 dme-miR-79-3p 7mer-m8 TAGCTTT 2L 2876816 2876822 + 2L_2876816_2876822_+ 0.620198172 0.620111547 0.62015486 6.13E-05 CG8814 FBtr0077629 2876361 2877168 2L + 2876787 2876841 3'utr CG8814 FlyBase G1379.1 TCTTCGGTTACGGGCACGAGCTTGGTCTTTAGCTTTCTTCTATCCTAGAAAGCGC 27 2876810 0.732747655 7 27 259 1 1.505149978 0 0.148148148 0.28125 27 0 0 32 2L:2876787-2876841 7 CG8814 FBtr0077629 2876361 2877168 TAGCTTT 7mer-m8 dme-miR-79-3p 2L + 2876788 2876826 3'utr CG8814 FlyBase G1079.1 CTTCGGTTACGGGCACGAGCTTGGTCTTTAGCTTTCTTC 23 2876809 0.750623232 6 21 186 0.972222222 1.544068044 0.138888889 0.434782609 0.638888889 23 1 0 35 2L:2876788-2876826 7 23 467 FBgn0031478 361.3733333 24.66 37.60666667 0.063646091 0.932684509 0.611593689 6 7 6.5 0.15 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 2877098 2877105 - 2L_2877098_2877105_- 0.625347925 0.625341849 0.625344887 4.31E-06 Prx6005 FBtr0077684 2877089 2877187 2L - 2877090 2877115 3'utr Prx6005 FlyBase G7126.1 CAATAAAGTATACGCTTACAACCGTA 8 2877105 0.758865998 2 6 28 0.916666667 1.041392685 0 0.25 0.5 8 1 0 11 2L:2877090-2877115 8 Prx6005 FBtr0077684 2877089 2877187 TACGCTTA 8mer-A1 dme-miR-965-3p 2L - 2877090 2877116 3'utr Prx6005 FlyBase G5590.1 ACAATAAAGTATACGCTTACAACCGTA 6 2877105 0.731785716 2 6 28 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2L:2877090-2877116 8 6 468 FBgn0031479 67.29333333 9.753333333 14.81333333 0.089161878 0.615174299 0.405040504 0 0 0 0.15 dme-bantam-3p 6mer3-8 TGATCT 2L 2880714 2880719 - 2L_2880714_2880719_- 0.977770795 0.994996383 0.986383589 0.012180339 NTPase FBtr0332459|FBtr0332460|FBtr0077683|FBtr0077682|FBtr0077680 2880702|2880702|2880703|2880702|2880702 2881227|2881227|2881227|2881227|2881227 2L - 2880701 2880737 5'utr-coding NTPase FlyBase G7128.1 AATAAATCAAATGTTAACTGATCTGAATTAAAGTAAA 9 2880710 0.701303948 5 8 69 0.888888889 0.903089987 0.111111111 0 0 9 1 0 8 2L:2880701-2880737 6 NTPase FBtr0077682|FBtr0077680|FBtr0332460|FBtr0077683|FBtr0332459 2880702|2880702|2880702|2880703|2880702 2881227|2881227|2881227|2881227|2881227 TGATCT 6mer3-8 dme-bantam-3p 2L - 2880702 2880729 5'utr-coding NTPase FlyBase G5592.1 AAATGTTAACTGATCTGAATTAAAGTAA 9 2880710 0.660348524 4 8 64 1 1.113943352 0.076923077 0.333333333 0.538461538 9 0 0 13 2L:2880702-2880729 6 9 469 FBgn0024947 993.2366667 56.17666667 85.57666667 0.009061284 0.160208865 0.105168854 -9 -9 -9 0.15 dme-miR-932-5p 6mer2-7 GAATTG 2L 293397 293402 - 2L_293397_293402_- 0.744860237 0.981291456 0.863075846 0.167182176 U2af38 FBtr0078133|FBtr0333408 293351|292957 293621|293621 2L - 293390 293438 3'utr U2af38 FlyBase G6509.1 AAACCCCCCGCGAAATATTTTACCGAGCGCCCATTAGAATTGTAATTTA 18 293419 0.976038361 5 18 119 1 1.301029996 0.25 0.111111111 0.2 18 0 0 20 2L:293390-293438 6 U2af38 FBtr0078133|FBtr0333408 293351|292957 293621|293621 GAATTG 6mer2-7 dme-miR-932-5p 2L - 293391 293431 3'utr U2af38 FlyBase G5089.1 CCGCGAAATATTTTACCGAGCGCCCATTAGAATTGTAATTT 6 293419 0.967724073 3 5 31 1 0.84509804 0 0.2 0.428571429 5 0 0 7 2L:293391-293431 6 6 470 FBgn0017457 340.28 32.69666667 50.14 0.017632538 0.183504944 0.119664938 17 17 17 0.15 dme-miR-79-3p 6mer3-8 TAGCTT 2L 297395 297400 + 2L_297395_297400_+ 0.962743893 0.962891802 0.962817847 0.000104581 Hop FBtr0078131 297048 297449 2L + 297302 297415 3'utr Hop FlyBase G679.1 ATTGATAAATGTCTGCCTAATTGATTTACGCAGACGGGTGGAGTAGGCTCCAAACGTCATGGTCCTTATTTTCTTACTACAATAAATATGCTGTAGCTTAGCTCTAAAATAAGT 35 297390 0.807157538 11 32 257 0.928571429 0.989004616 0.166666667 0.142857143 0.285714286 35 0 3 39 2L:297302-297415 6 Hop FBtr0078131 297048 297449 TAGCTT 6mer3-8 dme-miR-79-3p 2L + 297300 297432 3'utr Hop FlyBase G549.1 TCATTGATAAATGTCTGCCTAATTGATTTACGCAGACGGGTGGAGTAGGCTCCAAACGTCATGGTCCTTATTTTCTTACTACAATAAATATGCTGTAGCTTAGCTCTAAAATAAGTTTCTGTTTGTACAATAA 24 297390 0.912276558 13 22 196 0.935483871 1.462397998 0.096774194 0.208333333 0.387096774 24 2 0 29 2L:297300-297432 6 10 471 FBgn0024352 5110.506667 309.7066667 476.4533333 0.001956753 0.032288617 0.020988414 5 5 5 0.15 dme-miR-184-5p 8mer-A1 TGATAAGA 2L 2974707 2974714 + 2L_2974707_2974714_+ 0.601215391 0.60080039 0.60100789 0.000293449 gammaTub23C FBtr0077641 2974603 2974858 2L + 2974692 2974733 3'utr gammaTub23C FlyBase G1415.1 ATCCTTAAGTAGTAGTGATAAGACGATTGTTGGTATGACTCG 6 2974722 0.678962101 4 6 38 1 0.77815125 0.666666667 0 0 6 0 0 6 2L:2974692-2974733 8 gammaTub23C FBtr0077641 2974603 2974858 TGATAAGA 8mer-A1 dme-miR-184-5p 2L + 2974699 2974751 3'utr gammaTub23C FlyBase G1100.1 AGTAGTAGTGATAAGACGATTGTTGGTATGACTCGCATGTATGTAAACGCTGT 6 2974718 0.986652589 3 4 39 0.909090909 1 0.363636364 0.5 0.727272727 6 1 0 10 2L:2974699-2974751 8 5 472 FBgn0260639 328 21.35666667 32.38 0.015243902 0.234118932 0.154416306 -15 -11 -13 0.15 dme-miR-980-3p 6mer2-7 GCAGCT 2L 2974991 2974996 - 2L_2974991_2974996_- 0.999734048 0.995961112 0.99784758 0.002667843 CG9641 FBtr0077677|FBtr0077676 2974857|2974857 2975177|2975177 2L - 2974978 2975024 3'utr CG9641 FlyBase G7155.1 GACAACGGAACAAGGACAGCAGTATCGTGCAGCTTCACAAGTGAATT 6 2974997 0.937676622 3 5 21 1 0.903089987 0.625 0.333333333 0.5 6 0 0 8 2L:2974978-2975024 6 CG9641 FBtr0077677|FBtr0077676 2974857|2974857 2975177|2975177 GCAGCT 6mer2-7 dme-miR-980-3p 2L - 2974986 2975026 3'utr CG9641 FlyBase G5611.1 ATGACAACGGAACAAGGACAGCAGTATCGTGCAGCTTCACA 8 2975002 0.948118601 3 7 25 0.909090909 1 0.272727273 0.375 0.545454545 8 1 0 10 2L:2974986-2975026 6 5.5 473 FBgn0031483 465.01 30.09666667 46.35666667 0.011827703 0.18274449 0.118645287 1 6 3.5 0.15 dme-miR-999-3p 7mer-A1 GTTAACA 2L 2989543 2989549 + 2L_2989543_2989549_+ 0.79150084 0.806621659 0.79906125 0.010692091 Bem46 FBtr0077643 2989510 2990075 2L + 2989522 2989560 3'utr Bem46 FlyBase G1427.1 ATCAAGTGTTCAATTGACTGTGTTAACACTGCGAATGGT 21 2989536 0.723940947 6 21 174 1 1.397940009 0.16 0.142857143 0.28 21 0 0 25 2L:2989522-2989560 7 Bem46 FBtr0077643 2989510 2990075 GTTAACA 7mer-A1 dme-miR-999-3p 2L + 2989516 2989552 3'utr Bem46 FlyBase G1112.1 GAATACATCAAGTGTTCAATTGACTGTGTTAACACTG 15 2989536 0.947763754 6 13 124 0.875 0.84509804 0.041666667 0.4 0.625 15 1 2 21 2L:2989516-2989552 7 18 474 FBgn0025109 189.0366667 13.54 20.76666667 0.095219622 1.329394387 0.866773676 7 7 7 0.15 dme-miR-33-5p 7mer-m1 AATGCAC 2L 2998420 2998426 + 2L_2998420_2998426_+ 0.771865003 0.742782944 0.757323974 0.02056415 CG3558 FBtr0331653|FBtr0077644|FBtr0273230|FBtr0077645 2998247|2998247|2998247|2998247 2998726|2998726|2998726|2998726 2L + 2998407 2998443 3'utr CG3558 FlyBase G1447.1 AGATTTACAAGTTAATGCACACGGACTCAACTAAAAA 6 2998422 0.877258049 3 6 24 1 0.77815125 0 0 0 6 0 0 6 2L:2998407-2998443 7 CG3558 FBtr0273230|FBtr0077645|FBtr0331653|FBtr0077644 2998247|2998247|2998247|2998247 2998726|2998726|2998726|2998726 AATGCAC 7mer-m1 dme-miR-33-5p 2L + 2998383 2998438 3'utr CG3558 FlyBase G1128.1 TTAACGAACAATGCAGTTTTGAACAGATTTACAAGTTAATGCACACGGACTCAACT 11 2998421 0.886031998 7 11 49 1 1.301029996 0.05 0.545454545 0.75 11 0 0 20 2L:2998383-2998438 7 7 475 FBgn0025681 2409.06 69.7 106.8566667 0.002905698 0.100430416 0.065508313 -2 -1 -1.5 0.15 dme-miR-317-3p 7mer-A1 GTGTTCA 2L 2998524 2998530 + 2L_2998524_2998530_+ 0.823347037 0.823349278 0.823348158 1.63E-06 CG3558 FBtr0331653|FBtr0077644|FBtr0273230|FBtr0077645 2998247|2998247|2998247|2998247 2998726|2998726|2998726|2998726 2L + 2998465 2998535 3'utr CG3558 FlyBase G1448.1 GCGTTAAACAAATAGATTTAGGTTAAATGTTTTAAGTGAATCGGGACGGTGGATCTTAAGTGTTCAGATGT 17 2998520 0.981275975 8 12 134 0.761904762 0.726998728 0.666666667 0.176470588 0.333333333 17 3 2 16 2L:2998465-2998535 7 CG3558 FBtr0273230|FBtr0077645|FBtr0331653|FBtr0077644 2998247|2998247|2998247|2998247 2998726|2998726|2998726|2998726 GTGTTCA 7mer-A1 dme-miR-317-3p 2L + 2998474 2998546 3'utr CG3558 FlyBase G1129.1 AAATAGATTTAGGTTAAATGTTTTAAGTGAATCGGGACGGTGGATCTTAAGTGTTCAGATGTAAACAAATATT 16 2998519 0.980150922 9 15 106 0.954545455 1.322219295 0.590909091 0.3125 0.5 16 1 0 21 2L:2998474-2998546 7 11.5 476 FBgn0025681 2409.06 69.7 106.8566667 0.004773646 0.164992826 0.1076208 4 5 4.5 0.15 dme-miR-8-3p 7mer-A1 AGTATTA 2L 2998696 2998702 + 2L_2998696_2998702_+ 0.685884909 0.821411287 0.753648098 0.095831636 CG3558 FBtr0331653|FBtr0077644|FBtr0273230|FBtr0077645 2998247|2998247|2998247|2998247 2998726|2998726|2998726|2998726 2L + 2998678 2998732 3'utr CG3558 FlyBase G1449.1 ATGTAAAGCCAACTTGAAAGTATTAAATTGGTCCAAGTAAATGCACAGCCAAGAA 15 2998691 0.959410576 6 15 77 1 1.230448921 0.235294118 0.133333333 0.235294118 15 0 0 17 2L:2998678-2998732 7 CG3558 FBtr0273230|FBtr0077645|FBtr0331653|FBtr0077644 2998247|2998247|2998247|2998247 2998726|2998726|2998726|2998726 AGTATTA 7mer-A1 dme-miR-8-3p 2L + 2998678 2998706 3'utr CG3558 FlyBase G1130.1 ATGTAAAGCCAACTTGAAAGTATTAAATT 6 2998691 0.835623903 3 6 41 1 0.77815125 0 0 0 6 0 0 6 2L:2998678-2998706 7 8.5 477 FBgn0025681 2409.06 69.7 106.8566667 0.003528347 0.12195122 0.079545809 5 5 5 0.15 dme-miR-11-3p 7mer-m1 TGTGATG 2L 3021308 3021314 + 2L_3021308_3021314_+ 0.428326612 0.368792543 0.398559577 0.042096966 CG17264 FBtr0331628|FBtr0077647 3021226|3021226 3021506|3021506 2L + 3021268 3021328 3'utr CG17264 FlyBase G1457.1 TTATTTTTCAATTATCGAAATAGAGTTAAGATACTGTGTTTGTGATGACTTAAATACTTCT 133 3021307 0.777493441 12 125 1318 0.937888199 1.701855693 0.049689441 0.165413534 0.310559006 133 8 2 151 2L:3021268-3021328 7 CG17264 FBtr0077647|FBtr0331628 3021226|3021226 3021506|3021506 TGTGATG 7mer-m1 dme-miR-11-3p 2L + 3021271 3021375 3'utr CG17264 FlyBase G1132.1 TTTTTCAATTATCGAAATAGAGTTAAGATACTGTGTTTGTGATGACTTAAATACTTCTATTTTATTTGTAGGTTGATAGTAACATTCCCTGGATAAATAGTATGT 91 3021307 0.894286967 17 84 825 0.919117647 1.096910013 0.058823529 0.32967033 0.551470588 91 2 9 125 2L:3021271-3021375 7 98 478 FBgn0031490 217.3433333 9.67 14.60333333 0.450899498 10.1344364 6.710796622 1 1 1 0.15 dme-miR-8-3p 6mer2-7 AGTATT 2L 3021432 3021437 + 2L_3021432_3021437_+ 0.999997313 0.999998008 0.999997661 4.95E-07 CG17264 FBtr0331628|FBtr0077647 3021226|3021226 3021506|3021506 2L + 3021412 3021446 3'utr CG17264 FlyBase G1459.1 AAACTACAATGATTCAAAATAGTATTCTAAGCGAC 13 3021432 0.90615954 4 12 78 0.933333333 0.84509804 0.733333333 0.153846154 0.266666667 13 0 1 14 2L:3021412-3021446 6 CG17264 FBtr0077647|FBtr0331628 3021226|3021226 3021506|3021506 AGTATT 6mer2-7 dme-miR-8-3p 2L + 3021416 3021445 3'utr CG17264 FlyBase G1133.1 TACAATGATTCAAAATAGTATTCTAAGCGA 6 3021432 0.712939716 4 5 36 0.777777778 0.84509804 0.222222222 0.5 0.666666667 6 2 0 7 2L:3021416-3021445 6 8.5 479 FBgn0031490 217.3433333 9.67 14.60333333 0.03910863 0.879007239 0.582058891 0 0 0 0.15 dme-miR-12-5p 6mer3-8 AATACT 2L 3021517 3021522 - 2L_3021517_3021522_- 0.786370552 0.93429141 0.860330981 0.104595801 alpha4GT1 FBtr0077670 3021307 3021785 2L - 3021452 3021573 3'utr alpha4GT1 FlyBase G7221.1 ATTTTGCGATAAGCTTTACCTCTCCGATTGCACATTATATATATGTATTTAAATACTGATTGTGAATATAATTCGATAATATAAGCAAGCGAACAACTCACATAGACATTTATTGAAAGCTG 49 3021514 0.983700733 14 49 380 1 1.792391689 0.064516129 0.244897959 0.403225806 49 0 0 62 2L:3021452-3021573 6 alpha4GT1 FBtr0077670 3021307 3021785 AATACT 6mer3-8 dme-miR-12-5p 2L - 3021459 3021584 3'utr alpha4GT1 FlyBase G5645.1 AATGGTTTTTTATTTTGCGATAAGCTTTACCTCTCCGATTGCACATTATATATATGTATTTAAATACTGATTGTGAATATAATTCGATAATATAAGCAAGCGAACAACTCACATAGACATTTATTG 44 3021514 0.948261835 13 42 352 0.9375 1.77815125 0.078125 0.318181818 0.53125 44 4 0 60 2L:3021459-3021584 6 30.5 480 FBgn0031491 448.0066667 31.68666667 48.21 0.068079344 0.962549968 0.632648828 -8 -8 -8 0.15 dme-miR-31a-5p 6mer2-7 CTTGCC 2L 3026244 3026249 + 2L_3026244_3026249_+ 0.91379298 0.988044386 0.950918683 0.052503668 CG3542 FBtr0077648 3026115 3026439 2L + 3026222 3026341 3'utr CG3542 FlyBase G1465.1 TGGACAAGTTCTCTTTTCAGTCCTTGCCTTCCACTGCACTCTGCTTCGTTTGGTTTAGATACTGTCCTGGTCCCAGCACAAACCACACAGCGAACCACAATTGTAATTTCTTAGTCTCAA 15 3026245 0.988193845 8 15 133 1 1.204119983 0.25 0.066666667 0.125 15 0 0 16 2L:3026222-3026341 6 CG3542 FBtr0077648 3026115 3026439 CTTGCC 6mer2-7 dme-miR-31a-5p 2L + 3026200 3026262 3'utr CG3542 FlyBase G1137.1 AGCTAGCCCTGGACTCAGTTGCTGGACAAGTTCTCTTTTCAGTCCTTGCCTTCCACTGCACTC 7 3026245 0.981976273 3 7 56 1 1.079181246 0.083333333 0.571428571 0.75 7 0 0 12 2L:3026200-3026262 6 8 481 FBgn0031492 1159.55 48.74 75.20666667 0.006899228 0.164136233 0.106373548 -1 -1 -1 0.15 dme-miR-79-3p 6mer3-8 TAGCTT 2L 302727 302732 + 2L_302727_302732_+ 0.999999997 0.999943378 0.999971687 4.00E-05 Pi3K21B FBtr0331206|FBtr0331207|FBtr0331208|FBtr0331205 302658|302658|302658|302658 305233|305233|305233|303934 2L + 302653 302765 stop_codon Pi3K21B FlyBase G695.1 GCAGTAGGAGCCGCACATCAAATTGCCGCTAAACGAGCCCTCAACCTCAGGCTAGCTATCTATCTCTCTAATTCTAGCTTGCTCTAAAGCCCTAACTCTCTCTAACTCTAGAT 36 302699 0.976526844 18 35 229 0.976190476 1.612783857 0.119047619 0.138888889 0.261904762 36 1 0 41 2L:302653-302765 6 Pi3K21B FBtr0331205|FBtr0331208|FBtr0331207|FBtr0331206 302658|302658|302658|302658 303934|305233|305233|305233 TAGCTT 6mer3-8 dme-miR-79-3p 2L + 302658 302767 stop_codon Pi3K21B FlyBase G558.1 AGGAGCCGCACATCAAATTGCCGCTAAACGAGCCCTCAACCTCAGGCTAGCTATCTATCTCTCTAATTCTAGCTTGCTCTAAAGCCCTAACTCTCTCTAACTCTAGATAT 29 302705 0.982144712 11 24 172 0.833333333 1.602059991 0.083333333 0.413793103 0.645833333 29 8 0 40 2L:302658-302767 6 4 482 FBgn0020622 2718.376667 71.30333333 109.6833333 0.001471466 0.056098359 0.036468622 28 22 25 0.15 dme-miR-8-3p 6mer3-8 CAGTAT 2L 302832 302837 + 2L_302832_302837_+ 0.999984163 0.999821454 0.999902808 0.000115046 Pi3K21B FBtr0331206|FBtr0331207|FBtr0331208|FBtr0331205 302658|302658|302658|302658 305233|305233|305233|303934 2L + 302797 302837 3'utr Pi3K21B FlyBase G696.1 TGCAGGCTCTGTCAAAAGGCTTAAGCTGGATATGCCAGTAT 9 302805 0.746797221 6 8 53 1 0.954242509 0.555555556 0 0 9 0 0 9 2L:302797-302837 6 Pi3K21B FBtr0331205|FBtr0331208|FBtr0331207|FBtr0331206 302658|302658|302658|302658 303934|305233|305233|305233 CAGTAT 6mer3-8 dme-miR-8-3p 2L + 302797 302837 3'utr Pi3K21B FlyBase G559.1 TGCAGGCTCTGTCAAAAGGCTTAAGCTGGATATGCCAGTAT 8 302828 0.75013305 5 8 48 1 1.113943352 0.153846154 0.5 0.692307692 8 0 0 13 2L:302797-302837 6 4.5 483 FBgn0020622 2718.376667 71.30333333 109.6833333 0.0016554 0.063110654 0.0410272 27 4 15.5 0.15 dme-miR-11-3p 7mer-m1 TGTGATG 2L 303180 303186 + 2L_303180_303186_+ 0.608808896 0.611825183 0.61031704 0.002132846 Pi3K21B FBtr0331206|FBtr0331207|FBtr0331208|FBtr0331205 302658|302658|302658|302658 305233|305233|305233|303934 2L + 303070 303243 3'utr Pi3K21B FlyBase G697.1 TAGTGTTACAATAGCAATGCTATTATTTCGGCCATCGCCGATTGTGTACATCAGCATATATAGGCTATATATATATATATATATATATCTGTGCATGATTACTTTTTGTGTGTGATGGATGGCGCTGGCAGTTTAACTGCCCTCCGCTATCCCCTCAAGAATTAGACGGCTCCA 173 303178 0.991519902 24 148 1606 0.853658537 1.544068044 0.136585366 0.138728324 0.273170732 173 26 4 175 2L:303070-303243 7 Pi3K21B FBtr0331205|FBtr0331208|FBtr0331207|FBtr0331206 302658|302658|302658|302658 303934|305233|305233|305233 TGTGATG 7mer-m1 dme-miR-11-3p 2L + 303145 303247 3'utr Pi3K21B FlyBase G561.2 TATATATATATATCTGTGCATGATTACTTTTTGTGTGTGATGGATGGCGCTGGCAGTTTAACTGCCCTCCGCTATCCCCTCAAGAATTAGACGGCTCCAGAAA 109 303178 0.919607242 19 89 939 0.826086957 2.181843588 0.179347826 0.486238532 0.695652174 109 32 0 152 2L:303145-303247 7 116.5 484 FBgn0020622 2718.376667 71.30333333 109.6833333 0.04285646 1.633864709 1.06214861 2 2 2 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 2L 303403 303409 + 2L_303403_303409_+ 0.475705616 0.490499017 0.483102317 0.010460513 Pi3K21B FBtr0331206|FBtr0331207|FBtr0331208|FBtr0331205 302658|302658|302658|302658 305233|305233|305233|303934 2L + 303366 303432 3'utr Pi3K21B FlyBase G699.1 AAGATTAATTTTATACAAACATATTTTTTTGTAATACTGCATTTCGCGTGATAATTGATAAGTCGAG 62 303408 0.986161126 9 59 518 0.959459459 1.550228353 0.445945946 0.177419355 0.310810811 62 2 1 71 2L:303366-303432 7 Pi3K21B FBtr0331205|FBtr0331208|FBtr0331207|FBtr0331206 302658|302658|302658|302658 303934|305233|305233|305233 TGCATTT 7mer-m8 dme-miR-277-3p 2L + 303390 303429 3'utr Pi3K21B FlyBase G563.1 TTTTTTGTAATACTGCATTTCGCGTGATAATTGATAAGTC 42 303408 0.721181165 7 42 315 1 1.838849091 0.391304348 0.428571429 0.652173913 42 0 0 69 2L:303390-303429 7 49.5 485 FBgn0020622 2718.376667 71.30333333 109.6833333 0.018209397 0.694217194 0.451299195 -5 -5 -5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2L 303748 303753 + 2L_303748_303753_+ 0.730929047 0.730949366 0.730939206 1.44E-05 Pi3K21B FBtr0331206|FBtr0331206|FBtr0331206|FBtr0331207|FBtr0331207|FBtr0331207|FBtr0331208|FBtr0331208|FBtr0331208|FBtr0331205|FBtr0331205|FBtr0331205 302658|302658|302658|302658|302658|302658|302658|302658|302658|302658|302658|302658 305233|305233|305233|305233|305233|305233|305233|305233|305233|303934|303934|303934 2L + 303691 303792 3'utr Pi3K21B FlyBase G701.2 GTTATATTATAACTGATTTAAAGTAGTTTTAAGTGAAATCTACGTACGTTTACTCGATGTGATCAGTTGATTGTTGCTAACGTTAATTTTCCTTCAATTTTT 34 303741 0.719943953 16 30 334 0.909090909 1.124938737 0.295454545 0.264705882 0.431818182 34 2 2 40 2L:303691-303792 6 Pi3K21B FBtr0331205|FBtr0331205|FBtr0331205|FBtr0331208|FBtr0331208|FBtr0331208|FBtr0331207|FBtr0331207|FBtr0331207|FBtr0331206|FBtr0331206|FBtr0331206 302658|302658|302658|302658|302658|302658|302658|302658|302658|302658|302658|302658 303934|303934|303934|305233|305233|305233|305233|305233|305233|305233|305233|305233 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 303736 303790 3'utr Pi3K21B FlyBase G568.1 ACGTTTACTCGATGTGATCAGTTGATTGTTGCTAACGTTAATTTTCCTTCAATTT 14 303745 0.989052646 8 13 122 0.9375 1.176091259 0.5 0.142857143 0.25 14 1 0 15 2L:303736-303790 6 17 486 FBgn0020622 2718.376667 71.30333333 109.6833333 0.006253732 0.238418026 0.154991643 7 3 5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2L 304490 304495 + 2L_304490_304495_+ 0.996445387 0.999945069 0.998195228 0.002474662 Pi3K21B FBtr0331206|FBtr0331207|FBtr0331208 302658|302658|302658 305233|305233|305233 2L + 304332 304626 3'utr Pi3K21B FlyBase G704.1 CTTCGTAAGCGTGTTGAAAGAATGTTGACCTTTCTGTTTGCATTCTCCCTATTGAATTTGAGCGATCCACTTACTAGCACACACAAAAACTGTCGCGTCTTTAAGATATTCTTACATATATAAATTCGATGTATTCATTATACTGTATCTGCATACTTTACCTGTAATTCCTAATTTAACTTATTTAACTTGTAATTTGTGTGTTTCATTTTGCTTAAATTCTATGAGATTTTGGCGGATCTCGTACGTTGTAGTATTTATAAGTTTTAAATTTAGTTTGTAAAATGCGTTTCAA 146 304488 0.989493447 46 141 1371 0.960227273 1.926856709 0.159090909 0.164383562 0.306818182 146 6 1 169 2L:304332-304626 6 Pi3K21B FBtr0331208|FBtr0331207|FBtr0331206 302658|302658|302658 305233|305233|305233 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2L + 304421 304503 3'utr Pi3K21B FlyBase G569.1 CTGTCGCGTCTTTAAGATATTCTTACATATATAAATTCGATGTATTCATTATACTGTATCTGCATACTTTACCTGTAATTCCT 33 304489 0.988718234 10 32 306 0.978723404 1.361727836 0.063829787 0.303030303 0.510638298 33 0 1 46 2L:304421-304503 6 36 487 FBgn0020622 2718.376667 71.30333333 109.6833333 0.013243198 0.504885232 0.328217596 2 1 1.5 0.15 dme-miR-304-5p 7mer-m8 TGAGATT 2L 304556 304562 + 2L_304556_304562_+ 0.619534452 0.602233076 0.610883764 0.012233937 Pi3K21B FBtr0331206|FBtr0331207|FBtr0331208 302658|302658|302658 305233|305233|305233 2L + 304332 304626 3'utr Pi3K21B FlyBase G704.1 CTTCGTAAGCGTGTTGAAAGAATGTTGACCTTTCTGTTTGCATTCTCCCTATTGAATTTGAGCGATCCACTTACTAGCACACACAAAAACTGTCGCGTCTTTAAGATATTCTTACATATATAAATTCGATGTATTCATTATACTGTATCTGCATACTTTACCTGTAATTCCTAATTTAACTTATTTAACTTGTAATTTGTGTGTTTCATTTTGCTTAAATTCTATGAGATTTTGGCGGATCTCGTACGTTGTAGTATTTATAAGTTTTAAATTTAGTTTGTAAAATGCGTTTCAA 146 304563 0.989493447 46 141 1371 0.960227273 1.926856709 0.159090909 0.164383562 0.306818182 146 6 1 169 2L:304332-304626 7 Pi3K21B FBtr0331208|FBtr0331207|FBtr0331206 302658|302658|302658 305233|305233|305233 TGAGATT 7mer-m8 dme-miR-304-5p 2L + 304517 304610 3'utr Pi3K21B FlyBase G570.1 TAACTTGTAATTTGTGTGTTTCATTTTGCTTAAATTCTATGAGATTTTGGCGGATCTCGTACGTTGTAGTATTTATAAGTTTTAAATTTAGTTT 73 304563 0.69179169 20 68 661 0.919191919 1.658011397 0.272727273 0.273972603 0.464646465 73 7 1 91 2L:304517-304610 7 54 488 FBgn0020622 2718.376667 71.30333333 109.6833333 0.019864797 0.757327848 0.492326394 -7 -7 -7 0.15 dme-miR-263a-5p 7mer-A1 TGCCATA 2L 304774 304780 + 2L_304774_304780_+ 0.740334611 0.782715658 0.761525135 0.029967963 Pi3K21B FBtr0331206|FBtr0331207|FBtr0331208 302658|302658|302658 305233|305233|305233 2L + 304745 304810 3'utr Pi3K21B FlyBase G705.2 TGTTTGCTAACTGATAGATGATGACTTTTTGCCATACCTAAATGTTAAATGGAAATATTTGTGAAT 43 304772 0.636625074 15 35 275 0.903846154 1.672097858 0.173076923 0.238095238 0.384615385 42 5 0 47 2L:304745-304810 7 Pi3K21B FBtr0331208|FBtr0331207|FBtr0331206 302658|302658|302658 305233|305233|305233 TGCCATA 7mer-A1 dme-miR-263a-5p 2L + 304736 304779 3'utr Pi3K21B FlyBase G571.1 TGTCAATAATGTTTGCTAACTGATAGATGATGACTTTTTGCCAT 13 304772 0.928410656 5 13 99 1 1.361727836 0.217391304 0.538461538 0.739130435 13 0 0 23 2L:304736-304779 6 13 489 FBgn0020622 2718.376667 71.30333333 109.6833333 0.004782266 0.182319667 0.118523021 2 2 2 0.15 dme-miR-999-3p 8mer-A1 AGTTAACA 2L 3067726 3067733 + 2L_3067726_3067733_+ 0.628870475 0.620711035 0.624790755 0.005769638 CG3523 FBtr0077659|FBtr0335387 3067501|3067501 3068177|3068177 2L + 3067730 3067796 3'utr CG3523 FlyBase G1511.1 AACAGATTGGATTTGCGTCGATCGGATTGAATCTGCCTAACTGCTGTCTTGCAGGGCTGTAGGCTTC 26 3067740 0.797891894 13 22 221 0.833333333 1.096910013 0.366666667 0.153846154 0.266666667 26 4 1 25 2L:3067730-3067796 3 CG3523 FBtr0077659|FBtr0335387 3067501|3067501 3068177|3068177 AGTTAACA 8mer-A1 dme-miR-999-3p 2L + 3067730 3067795 3'utr CG3523 FlyBase G1190.1 AACAGATTGGATTTGCGTCGATCGGATTGAATCTGCCTAACTGCTGTCTTGCAGGGCTGTAGGCTT 17 3067741 0.711409244 10 14 135 0.884615385 1.06069784 0.269230769 0.352941176 0.576923077 17 2 1 23 2L:3067730-3067795 3 7.5 490 FBgn0027571 21016.13 290.6166667 443.8066667 0.000356869 0.025807192 0.01689925 -14 -15 -14.5 0.15 dme-miR-283-5p 7mer-A1 GATATTA 2L 3068149 3068155 + 2L_3068149_3068155_+ 0.717371329 0.773009253 0.745190291 0.039342007 CG3523 FBtr0077659|FBtr0335387 3067501|3067501 3068177|3068177 2L + 3067836 3068167 3'utr CG3523 FlyBase G1512.1 GTTGAAATGATGCAAGATGAGAGGCTCAGTCCATAACACTTAACGCTTTGTGCACCGTACAATTTAGTACCCGACATTCCTTGAGAGCTAGACGGCACCAGACGTCCCAACTTACCAAATATATCTTTTATGCTCTATCTATAATGTATGTCGCATATTCTAGTTTTATTGCCTAGTTGTAAGCCTACAGTTTGTAGTCGCGCATGTAATGAATTTCATTCCTCGAACTAACCCAAGAAAGAGACTACAACATTCGTTATCTCTCTTGATGTATAAAATAATCGCCCAAAAATTATCACTCATGAATATTGTGGATATTAAAATTACACCAT 1637 3068144 0.860889925 74 1526 12254 0.926841834 1.893303327 0.079855744 0.153329261 0.285935085 1637 120 22 1799 2L:3067836-3068167 7 CG3523 FBtr0077659|FBtr0335387 3067501|3067501 3068177|3068177 GATATTA 7mer-A1 dme-miR-283-5p 2L + 3067981 3068167 3'utr CG3523 FlyBase G1191.2 GTATGTCGCATATTCTAGTTTTATTGCCTAGTTGTAAGCCTACAGTTTGTAGTCGCGCATGTAATGAATTTCATTCCTCGAACTAACCCAAGAAAGAGACTACAACATTCGTTATCTCTCTTGATGTATAAAATAATCGCCCAAAAATTATCACTCATGAATATTGTGGATATTAAAATTACACCAT 560 3068144 0.774923827 39 534 4862 0.95377129 1.991226076 0.0243309 0.3625 0.565693431 560 31 7 784 2L:3067981-3068167 7 672 491 FBgn0027571 21016.13 290.6166667 443.8066667 0.03197544 2.312324368 1.514172838 5 5 5 0.15 dme-bantam-3p 6mer3-8 TGATCT 2L 3146647 3146652 - 2L_3146647_3146652_- 0.999520306 0.999999997 0.999760152 0.000339199 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 2L - 3146626 3146721 3'utr Mad FlyBase G7252.1 ACAAGAAAAGATACCAGCGAAATTTAAGAATGGAAAAATGCTACTGAATCAATACGTTTTCCCAGACAATGATCTTTTGTTATCTTAAGTAAAACT 178 3146652 0.950769641 8 175 1917 0.985294118 2.002166062 0.191176471 0.129213483 0.240196078 178 2 1 201 2L:3146626-3146721 6 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 TGATCT 6mer3-8 dme-bantam-3p 2L - 3146580 3146719 3'utr Mad FlyBase G5672.1 AAGAAAAGATACCAGCGAAATTTAAGAATGGAAAAATGCTACTGAATCAATACGTTTTCCCAGACAATGATCTTTTGTTATCTTAAGTAAAACTAATATTGTTTAGACCACGAGAAAATTGCCTTTTTATATAAATATAC 152 3146651 0.999995364 13 148 1524 0.981981982 2.037426498 0.256756757 0.322368421 0.536036036 152 3 1 218 2L:3146580-3146719 6 145.5 492 FBgn0011648 490.6766667 21.49 32.97333333 0.296529283 6.770590973 4.412656692 0 -1 -0.5 0.15 dme-miR-980-3p 8mer-A1 GGCAGCTA 2L 3147213 3147220 - 2L_3147213_3147220_- 0.668734337 0.66789618 0.668315259 0.000592626 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 2L - 3147182 3147243 3'utr Mad FlyBase G7255.1 GCAGATTTATATAGATGATGTACGGCAGCTACTCCAATACCCGCCCTTTGCCCATATTTTAT 71 3147227 0.718320133 9 68 366 0.962962963 1.892094603 0.209876543 0.14084507 0.24691358 71 3 0 78 2L:3147182-3147243 8 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 GGCAGCTA 8mer-A1 dme-miR-980-3p 2L - 3147149 3147239 3'utr Mad FlyBase G5675.1 ATTTATATAGATGATGTACGGCAGCTACTCCAATACCCGCCCTTTGCCCATATTTTATAGTTTATCGTATGATTTTCTATGCGAATGTCAT 46 3147227 0.969233548 12 44 259 0.971428571 1.832508913 0.285714286 0.347826087 0.571428571 46 2 0 68 2L:3147149-3147239 8 54 493 FBgn0011648 490.6766667 21.49 32.97333333 0.110052105 2.51279665 1.63768702 7 7 7 0.15 dme-miR-2a-2-5p 7mer-m1 GATGAGG 2L 3147406 3147412 - 2L_3147406_3147412_- 0.821037516 0.824615534 0.822826525 0.002530028 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 2L - 3147378 3147481 stop_codon Mad FlyBase G7257.1 TGGCTGGACAAGGTGCTCACCCAAATGGGCTCTCCGCATAATGCAATTAGTTCGGTATCCTAAGCTTAAGATGAGGCTCGAGTCCTCAATGGAGACGGAAGAGA 24 3147410 0.967203984 9 23 127 0.965517241 1.146128036 0.172413793 0.208333333 0.344827586 24 0 1 28 2L:3147378-3147481 7 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 GATGAGG 7mer-m1 dme-miR-2a-2-5p 2L - 3147351 3147459 stop_codon Mad FlyBase G5677.1 AAATGGGCTCTCCGCATAATGCAATTAGTTCGGTATCCTAAGCTTAAGATGAGGCTCGAGTCCTCAATGGAGACGGAAGAGAAGGAACACAAAACCGGTAGCTAAATGA 19 3147410 0.994928317 8 18 109 0.942857143 1.51851394 0.2 0.578947368 0.771428571 19 2 0 33 2L:3147351-3147459 7 9 494 FBgn0011648 490.6766667 21.49 32.97333333 0.018342017 0.418799442 0.272947837 -2 -2 -2 0.15 dme-miR-307a-3p 6mer3-8 GGTTGT 2L 3168259 3168264 + 2L_3168259_3168264_+ 0.999526445 0.988001156 0.9937638 0.008149547 Hydr2 FBtr0332371|FBtr0077576|FBtr0308315 3168200|3168200|3168200 3168988|3168988|3169462 2L + 3168216 3168275 3'utr Hydr2 FlyBase G1531.1 TTCACACGCATACACGACTATTTAACGCTTCTGTGTCAAAATTGGTTGTCGCTGTCGAAT 30 3168258 0.985161205 8 29 235 0.972222222 1.544068044 0.5 0.133333333 0.277777778 30 1 0 35 2L:3168216-3168275 6 Hydr2 FBtr0308315|FBtr0077576|FBtr0332371 3168200|3168200|3168200 3169462|3168988|3168988 GGTTGT 6mer3-8 dme-miR-307a-3p 2L + 3168222 3168365 3'utr Hydr2 FlyBase G1204.1 CGCATACACGACTATTTAACGCTTCTGTGTCAAAATTGGTTGTCGCTGTCGAATATAAATCTTTGAAGAACCATCGGAACGGAAGAGAGCCCGAAAGACCCCATACATATAGTTCTAACATATGATATCGTTGTGCAGCAATTA 33 3168258 0.980669903 16 32 232 0.94 1.672097858 0.46 0.363636364 0.58 33 3 0 47 2L:3168222-3168365 6 14 495 FBgn0014906 1672.66 89.72666667 137.1866667 0.008369902 0.156029423 0.102050734 1 1 1 0.15 dme-miR-283-5p 6mer3-8 TGATAT 2L 3168344 3168349 + 2L_3168344_3168349_+ 0.916731176 0.850147763 0.88343947 0.047081574 Hydr2 FBtr0332371|FBtr0077576|FBtr0308315 3168200|3168200|3168200 3168988|3168988|3169462 2L + 3168295 3168389 3'utr Hydr2 FlyBase G1532.1 TCGGAACGGAAGAGAGCCCGAAAGACCCCATACATATAGTTCTAACATATGATATCGTTGTGCAGCAATTATAAATTATCAGCCGCGCAAGCATA 19 3168344 0.978478789 10 19 126 1 1.447158031 0.071428571 0.368421053 0.571428571 19 0 0 28 2L:3168295-3168389 6 Hydr2 FBtr0308315|FBtr0077576|FBtr0332371 3168200|3168200|3168200 3169462|3168988|3168988 TGATAT 6mer3-8 dme-miR-283-5p 2L + 3168222 3168365 3'utr Hydr2 FlyBase G1204.1 CGCATACACGACTATTTAACGCTTCTGTGTCAAAATTGGTTGTCGCTGTCGAATATAAATCTTTGAAGAACCATCGGAACGGAAGAGAGCCCGAAAGACCCCATACATATAGTTCTAACATATGATATCGTTGTGCAGCAATTA 33 3168351 0.980669903 16 32 232 0.94 1.672097858 0.46 0.363636364 0.58 33 3 0 47 2L:3168222-3168365 6 13 496 FBgn0014906 1672.66 89.72666667 137.1866667 0.007772052 0.144884464 0.094761396 0 -7 -3.5 0.15 dme-miR-999-3p 7mer-m8 AGTTAAC 2L 3168520 3168526 + 2L_3168520_3168526_+ 0.507953071 0.491702209 0.49982764 0.011491122 Hydr2 FBtr0332371|FBtr0077576|FBtr0308315 3168200|3168200|3168200 3168988|3168988|3169462 2L + 3168484 3168563 3'utr Hydr2 FlyBase G1533.2 AACATACAATGTATCAGTTGAACTCGTACCTTAGTTAGTTAACGCGACCACATGTATCCATGTACTTATGTCTAAGCAAA 91 3168518 0.772219073 15 84 750 0.946902655 1.728353782 0.17699115 0.131868132 0.300884956 91 5 1 107 2L:3168484-3168563 7 Hydr2 FBtr0308315|FBtr0077576|FBtr0332371 3168200|3168200|3168200 3169462|3168988|3168988 AGTTAAC 7mer-m8 dme-miR-999-3p 2L + 3168444 3168561 3'utr Hydr2 FlyBase G1205.1 GAACGATTTTTATGCTTTTTAATGACTTTTTGAAGAGCCAAACATACAATGTATCAGTTGAACTCGTACCTTAGTTAGTTAACGCGACCACATGTATCCATGTACTTATGTCTAAGCA 56 3168517 0.985954201 15 52 438 0.91011236 1.063386979 0.101123596 0.339285714 0.584269663 56 2 6 81 2L:3168444-3168561 7 44.5 497 FBgn0014906 1672.66 89.72666667 137.1866667 0.026604331 0.495950665 0.324375547 2 3 2.5 0.15 dme-bantam-3p 6mer3-8 TGATCT 2L 3359554 3359559 - 2L_3359554_3359559_- 0.999889456 0.998523423 0.999206439 0.000965979 CG34394 FBtr0332409|FBtr0306333|FBtr0306335|FBtr0112638|FBtr0112641|FBtr0112639 3358638|3358638|3358638|3358638|3358638|3358638 3360717|3360717|3360717|3360717|3360717|3360717 2L - 3359525 3359578 3'utr CG34394 FlyBase G7275.1 GGTAAGAAAAGCGCGTGTATGATCTAAGTAGCTGCATTTTAGTTAGACTAGAGC 13 3359561 0.980829675 6 11 77 0.923076923 1.079181246 0.461538462 0 0 13 1 0 12 2L:3359525-3359578 6 CG34394 FBtr0112638|FBtr0306335|FBtr0306333|FBtr0332409|FBtr0112639|FBtr0112641 3358638|3358638|3358638|3358638|3358638|3358638 3360717|3360717|3360717|3360717|3360717|3360717 TGATCT 6mer3-8 dme-bantam-3p 2L - 3359526 3359586 3'utr CG34394 FlyBase G5688.1 GTTTTAATGGTAAGAAAAGCGCGTGTATGATCTAAGTAGCTGCATTTTAGTTAGACTAGAG 14 3359560 0.717420369 5 13 94 0.941176471 0.903089987 0.294117647 0.214285714 0.352941176 14 0 1 16 2L:3359526-3359586 6 10 498 FBgn0085423 1284.263333 25.49333333 39.12 0.007786565 0.392259414 0.255623722 2 1 1.5 0.15 dme-miR-317-5p 8mer-A1 GTATCCCA 2L 3360255 3360262 - 2L_3360255_3360262_- 0.675269302 0.674819831 0.675044566 0.000317844 CG34394 FBtr0332409|FBtr0306333|FBtr0306335|FBtr0112638|FBtr0112641|FBtr0112639 3358638|3358638|3358638|3358638|3358638|3358638 3360717|3360717|3360717|3360717|3360717|3360717 2L - 3360240 3360304 3'utr CG34394 FlyBase G7281.2 ATCCTCTGACACTGAATGTTAAGGTTAATGTTGAAAATTCATGTATCCCAATCAAGGTTTAACCT 11 3360246 0.789631528 5 9 69 0.785714286 1.041392685 0.142857143 0.181818182 0.357142857 11 3 0 11 2L:3360240-3360304 8 CG34394 FBtr0112638|FBtr0306335|FBtr0306333|FBtr0332409|FBtr0112639|FBtr0112641 3358638|3358638|3358638|3358638|3358638|3358638 3360717|3360717|3360717|3360717|3360717|3360717 GTATCCCA 8mer-A1 dme-miR-317-5p 2L - 3360239 3360291 3'utr CG34394 FlyBase G5692.1 GAATGTTAAGGTTAATGTTGAAAATTCATGTATCCCAATCAAGGTTTAACCTA 10 3360246 0.977205411 3 9 61 1 1.146128036 0.142857143 0.3 0.5 10 0 0 14 2L:3360239-3360291 8 7 499 FBgn0085423 1284.263333 25.49333333 39.12 0.005450596 0.27458159 0.178936605 -16 -16 -16 0.15 dme-bantam-3p 7mer-m8 TGATCTC 2L 3360367 3360373 - 2L_3360367_3360373_- 0.661588704 0.661600712 0.661594708 8.49E-06 CG34394 FBtr0332409|FBtr0306333|FBtr0306335|FBtr0112638|FBtr0112641|FBtr0112639 3358638|3358638|3358638|3358638|3358638|3358638 3360717|3360717|3360717|3360717|3360717|3360717 2L - 3360306 3360421 3'utr CG34394 FlyBase G7282.1 AGGTCTGATAGTTTTGAAACGCACTGCACCAGCGGGCATTTGTTACTTTGATCTCCTAGTTAGCAATACACAAAACCCAAACTTGTGCATGTTCTATTCTCTCGGATTAAGATACA 496 3360374 0.807763879 18 476 5025 0.961148649 2.056142262 0.336148649 0.157258065 0.293918919 496 19 4 569 2L:3360306-3360421 7 CG34394 FBtr0112638|FBtr0306335|FBtr0306333|FBtr0332409|FBtr0112639|FBtr0112641 3358638|3358638|3358638|3358638|3358638|3358638 3360717|3360717|3360717|3360717|3360717|3360717 TGATCTC 7mer-m8 dme-bantam-3p 2L - 3360345 3360423 3'utr CG34394 FlyBase G5693.1 AAAGGTCTGATAGTTTTGAAACGCACTGCACCAGCGGGCATTTGTTACTTTGATCTCCTAGTTAGCAATACACAAAACC 266 3360374 0.720383739 16 249 2609 0.938931298 1.721928326 0.361323155 0.342105263 0.554707379 266 18 6 369 2L:3360345-3360423 7 367 500 FBgn0085423 1284.263333 25.49333333 39.12 0.285766938 14.3959205 9.381390593 1 1 1 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2L 3375997 3376002 - 2L_3375997_3376002_- 0.790649865 0.793775118 0.792212491 0.00220985 CG9662 FBtr0332407|FBtr0077594 3375830|3375881 3376109|3376109 2L - 3375968 3376043 3'utr CG9662 FlyBase G7293.1 TCGCCAGAAATTCTAGTTTAAAAGGCTTAAAGCTGCGGAATACCAAACAAAAACTTTGATTTCGTTTTAAAATTTT 16 3376003 0.997557214 3 15 62 1 1.278753601 0.105263158 0.125 0.263157895 16 0 0 19 2L:3375968-3376043 6 CG9662 FBtr0332407|FBtr0077594 3375830|3375881 3376109|3376109 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 3375975 3376054 3'utr CG9662 FlyBase G5701.1 CCGAACTGCATTCGCCAGAAATTCTAGTTTAAAAGGCTTAAAGCTGCGGAATACCAAACAAAAACTTTGATTTCGTTTTA 12 3376003 0.961843316 4 12 53 1 1.204119983 0.1875 0.333333333 0.5 12 0 0 16 2L:3375975-3376054 6 9.5 501 FBgn0031529 163.3333333 24.98 37.89333333 0.058163265 0.380304243 0.25070373 1 1 1 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 3405151 3405157 - 2L_3405151_3405157_- 0.658955952 0.658968965 0.658962459 9.19E-06 pgant2 FBtr0077592|FBtr0303992 3404458|3404458 3405576|3405576 2L - 3405145 3405180 3'utr pgant2 FlyBase G7299.1 ACTGTAACCCTAATGCAACCTTTGGCAGCTGATTAA 63 3405158 0.75787803 3 62 395 0.975308642 1.897627091 0.086419753 0.19047619 0.37037037 63 2 0 79 2L:3405145-3405180 7 pgant2 FBtr0077592|FBtr0303992 3404458|3404458 3405576|3405576 GGCAGCT 7mer-m8 dme-miR-980-3p 2L - 3405145 3405181 3'utr pgant2 FlyBase G5706.1 TACTGTAACCCTAATGCAACCTTTGGCAGCTGATTAA 60 3405158 0.740495215 5 59 373 0.978021978 1.949390007 0.131868132 0.366666667 0.582417582 60 2 0 89 2L:3405145-3405181 7 61.5 502 FBgn0031530 60.33333333 2.156666667 3.27 1.019337017 28.51622875 18.80733945 1 1 1 0.15 dme-miR-14-3p 7mer-A1 AGACTGA 2L 3405235 3405241 - 2L_3405235_3405241_- 0.487610787 0.610940641 0.549275714 0.087207338 pgant2 FBtr0077592|FBtr0303992 3404458|3404458 3405576|3405576 2L - 3405214 3405267 3'utr pgant2 FlyBase G7300.1 ATAAAGGGCATACAAAAAACGTACTTAGACTGATTAATTTTTTGTATATGTATA 57 3405243 0.833765255 4 55 503 0.971830986 1.537819095 0.014084507 0.228070175 0.38028169 57 1 1 69 2L:3405214-3405267 7 pgant2 FBtr0077592|FBtr0303992 3404458|3404458 3405576|3405576 AGACTGA 7mer-A1 dme-miR-14-3p 2L - 3405221 3405267 3'utr pgant2 FlyBase G5707.1 ATAAAGGGCATACAAAAAACGTACTTAGACTGATTAATTTTTTGTAT 44 3405243 0.985200751 3 42 347 0.9 1.799340549 0.071428571 0.363636364 0.6 44 7 0 63 2L:3405221-3405267 7 50 503 FBgn0031530 60.33333333 2.156666667 3.27 0.828729282 23.18392581 15.29051988 2 2 2 0.15 dme-miR-277-3p 6mer2-7 GCATTT 2L 3451763 3451768 + 2L_3451763_3451768_+ 0.67794682 0.574666745 0.626306782 0.073030059 Snx1 FBtr0343238|FBtr0077517 3451566|3451566 3452106|3452106 2L + 3451727 3451953 3'utr Snx1 FlyBase G1550.1 CGTATTTTTTGGGAAACTGCTTCCGATTCCTCTCAAGCATTTCGCGATGCATTCACAATGCCTCTATCTCTTTATTCGTACACAGTAATTATTATCAGAAAGCTGAAAGTTTGCTACAGACCCAGGGATCTGCGTATTCTCATTCAAAAATTGTATTCGGTATTATCTAAAACAAAGCCATGGATCTAGTTAGTTAGTTGAAAGTGAAGAAGACTCATTGGCAATTT 84 3451767 0.977545644 26 78 684 0.928571429 1.481920138 0.071428571 0.130952381 0.255102041 84 5 2 91 2L:3451727-3451953 6 Snx1 FBtr0343238|FBtr0077517 3451566|3451566 3452106|3452106 GCATTT 6mer2-7 dme-miR-277-3p 2L + 3451744 3451822 3'utr Snx1 FlyBase G1224.1 TGCTTCCGATTCCTCTCAAGCATTTCGCGATGCATTCACAATGCCTCTATCTCTTTATTCGTACACAGTAATTATTATC 34 3451767 0.985779371 11 33 276 0.960784314 1.69019608 0 0.323529412 0.549019608 34 2 0 49 2L:3451744-3451822 6 26.5 504 FBgn0031534 591 35.52666667 54.49666667 0.044839255 0.745918559 0.486268273 -4 -4 -4 0.15 dme-miR-965-3p 7mer-m8 TACGCTT 2L 3453778 3453784 - 2L_3453778_3453784_- 0.620202208 0.620204825 0.620203517 1.84E-06 Cog3 FBtr0077573 3453695 3453922 2L - 3453757 3453799 3'utr Cog3 FlyBase G7302.1 GTGTTAAAAACTATCTACGCTTTCCAAATGTAGACTTAACATT 14 3453784 0.751685691 4 12 103 0.875 0.84509804 0.375 0.142857143 0.25 14 1 1 14 2L:3453757-3453799 7 Cog3 FBtr0077573 3453695 3453922 TACGCTT 7mer-m8 dme-miR-965-3p 2L - 3453748 3453806 3'utr Cog3 FlyBase G5709.1 AAGATCCGTGTTAAAAACTATCTACGCTTTCCAAATGTAGACTTAACATTAATTTATTT 13 3453784 0.745647707 7 10 101 0.842105263 1.204119983 0.315789474 0.384615385 0.578947368 13 3 0 16 2L:3453748-3453806 7 11 505 FBgn0031536 124 5.03 7.693333333 0.088709677 2.186878728 1.429809359 0 0 0 0.15 dme-miR-8-3p 7mer-m8 CAGTATT 2L 345528 345534 + 2L_345528_345534_+ 0.631137465 0.652051034 0.64159425 0.014788078 Plc21C FBtr0078049|FBtr0078050|FBtr0330674|FBtr0078047|FBtr0330673|FBtr0078048 345447|345447|345447|345447|345447|345447 355566|347927|346255|346255|346255|346541 2L + 345515 345564 3'utr Plc21C FlyBase G717.1 AGTTGTTAGTCTTCAGTATTTACAGCAGAAACATAGGAATGAAAAGTCTT 12 345527 0.994932734 5 11 76 0.933333333 1.146128036 0.2 0.25 0.4 12 1 0 14 2L:345515-345564 7 Plc21C FBtr0330673|FBtr0078048|FBtr0330674|FBtr0078047|FBtr0078049|FBtr0078050 345447|345447|345447|345447|345447|345447 346255|346541|346255|346255|355566|347927 CAGTATT 7mer-m8 dme-miR-8-3p 2L + 345491 345555 3'utr Plc21C FlyBase G579.1 CCCTAGGATTAATTGTGGTTCTAAAGTTGTTAGTCTTCAGTATTTACAGCAGAAACATAGGAATG 9 345526 0.989069386 6 8 50 0.923076923 1.079181246 0.461538462 0.222222222 0.461538462 9 1 0 12 2L:345491-345555 7 7.5 506 FBgn0004611 260.3233333 5.52 8.483333333 0.028810326 1.358695652 0.884086444 1 2 1.5 0.15 dme-miR-307a-3p 7mer-m8 GGTTGTG 2L 346001 346007 + 2L_346001_346007_+ 0.702405797 0.702968371 0.702687084 0.000397818 Plc21C FBtr0078049|FBtr0078050|FBtr0330674|FBtr0078047|FBtr0330673|FBtr0078048 345447|345447|345447|345447|345447|345447 355566|347927|346255|346255|346255|346541 2L + 345963 346020 3'utr Plc21C FlyBase G719.1 AAGGAGACTGAGTGCTCCATTTGTCTAATGCTAATTGTGGTTGTGTGTATTTTACATC 26 345999 0.991496352 7 26 279 1 1.505149978 0.09375 0.192307692 0.34375 26 0 0 32 2L:345963-346020 7 Plc21C FBtr0330673|FBtr0078048|FBtr0330674|FBtr0078047|FBtr0078049|FBtr0078050 345447|345447|345447|345447|345447|345447 346255|346541|346255|346255|355566|347927 GGTTGTG 7mer-m8 dme-miR-307a-3p 2L + 345983 346022 3'utr Plc21C FlyBase G581.1 TTGTCTAATGCTAATTGTGGTTGTGTGTATTTTACATCAG 16 346001 0.701867721 5 15 177 0.964285714 1.431363764 0.321428571 0.5 0.714285714 16 1 0 27 2L:345983-346022 7 20.5 507 FBgn0004611 260.3233333 5.52 8.483333333 0.078748223 3.713768116 2.416502947 2 0 1 0.15 dme-miR-1006-3p 6mer2-7 GAATTT 2L 3462339 3462344 - 2L_3462339_3462344_- 0.910373889 0.99995871 0.955166299 0.06334602 msl-2 FBtr0077571|FBtr0077570 3462216|3462216 3463265|3463265 2L - 3462260 3462372 3'utr msl-2 FlyBase G7308.1 TGAATAGGCTAAGACTTTTTTTGAGCATGAATTTTTTTGAGCACGTGAACCTAGGATTAAGAACAACAATTCAAGTAAGCCATATATACCCATATTATATATGCGAACATATA 16 3462353 0.988682103 11 13 120 0.863636364 1.278753601 0.090909091 0.25 0.454545455 16 3 0 19 2L:3462260-3462372 6 msl-2 FBtr0077570|FBtr0077571 3462216|3462216 3463265|3463265 GAATTT 6mer2-7 dme-miR-1006-3p 2L - 3462251 3462384 3'utr msl-2 FlyBase G5713.1 AAGACATTTTTTTGAATAGGCTAAGACTTTTTTTGAGCATGAATTTTTTTGAGCACGTGAACCTAGGATTAAGAACAACAATTCAAGTAAGCCATATATACCCATATTATATATGCGAACATATAACTATTAAA 29 3462352 0.985707609 16 28 224 0.923076923 1.556302501 0.256410256 0.275862069 0.461538462 29 3 0 36 2L:3462251-3462384 6 11 508 FBgn0005616 482.6633333 15.65666667 24.13 0.022790213 0.702576112 0.45586407 9 8 8.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 3462415 3462420 - 2L_3462415_3462420_- 0.702503762 0.682891421 0.692697592 0.013868061 msl-2 FBtr0077571|FBtr0077571|FBtr0077571|FBtr0077570|FBtr0077570|FBtr0077570 3462216|3462216|3462216|3462216|3462216|3462216 3463265|3463265|3463265|3463265|3463265|3463265 2L - 3462400 3462446 3'utr msl-2 FlyBase G7309.1 AGATTGCTTTGCCCAAAATGTGGATGCTGTGAGCTAAAAAAAACCTT 15 3462422 0.9208458 6 13 86 0.9375 0.875061263 0.375 0.066666667 0.125 15 0 1 15 2L:3462400-3462446 6 msl-2 FBtr0077570|FBtr0077570|FBtr0077570|FBtr0077571|FBtr0077571|FBtr0077571 3462216|3462216|3462216|3462216|3462216|3462216 3463265|3463265|3463265|3463265|3463265|3463265 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 3462403 3462446 3'utr msl-2 FlyBase G5714.1 AGATTGCTTTGCCCAAAATGTGGATGCTGTGAGCTAAAAAAAAC 10 3462421 0.692380795 4 10 60 1 1.113943352 0.230769231 0.3 0.461538462 10 0 0 13 2L:3462403-3462446 6 12 509 FBgn0005616 482.6633333 15.65666667 24.13 0.02486205 0.766446668 0.497306258 2 1 1.5 0.15 dme-miR-970-3p 6mer3-8 TCTTAT 2L 3463113 3463118 - 2L_3463113_3463118_- 0.998322835 0.998625809 0.998474322 0.000214253 msl-2 FBtr0077571|FBtr0077570 3462216|3462216 3463265|3463265 2L - 3463090 3463151 3'utr msl-2 FlyBase G7313.1 ATTGCATCCATAACGTGGTATCGTCTTTGATCCTCTTATCATACCCGTTATTCGTAGAGTAA 141 3463124 0.750628951 15 118 1573 0.825301205 1.437750563 0.228915663 0.163120567 0.289156627 141 25 4 137 2L:3463090-3463151 6 msl-2 FBtr0077570|FBtr0077571 3462216|3462216 3463265|3463265 TCTTAT 6mer3-8 dme-miR-970-3p 2L - 3463089 3463149 3'utr msl-2 FlyBase G5717.1 TGCATCCATAACGTGGTATCGTCTTTGATCCTCTTATCATACCCGTTATTCGTAGAGTAAA 105 3463124 0.757283674 12 82 1058 0.781456954 2.071882007 0.145695364 0.342857143 0.543046358 105 33 0 118 2L:3463089-3463149 6 121.5 510 FBgn0005616 482.6633333 15.65666667 24.13 0.251728258 7.760272514 5.03522586 6 6 6 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 3621106 3621111 + 2L_3621106_3621111_+ 0.999839132 0.999527098 0.999683115 0.000220617 Dot FBtr0339571|FBtr0339571|FBtr0339571|FBtr0077532|FBtr0077532|FBtr0077532 3621072|3621072|3621072|3621072|3621072|3621072 3621573|3621573|3621573|3621171|3621171|3621171 2L + 3621087 3621126 3'utr Dot FlyBase G1591.1 ACGCATGACTTGACAATTTCTGTGACAACAAATATATATA 17 3621104 0.636724767 6 16 116 0.947368421 1.255272505 0 0.117647059 0.210526316 17 1 0 18 2L:3621087-3621126 6 Dot FBtr0339571|FBtr0339571|FBtr0339571|FBtr0077532|FBtr0077532|FBtr0077532 3621072|3621072|3621072|3621072|3621072|3621072 3621573|3621573|3621573|3621171|3621171|3621171 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 3621080 3621128 3'utr Dot FlyBase G1254.1 AAGATTTACGCATGACTTGACAATTTCTGTGACAACAAATATATATATT 12 3621104 0.95693276 5 12 93 1 1.230448921 0 0.333333333 0.529411765 12 0 0 17 2L:3621080-3621128 6 13.5 511 FBgn0015663 146.7833333 8.573333333 13.06 0.091972295 1.574650078 1.033690658 2 2 2 0.15 dme-miR-932-5p 8mer-A1 GGAATTGA 2L 3622414 3622421 - 2L_3622414_3622421_- 0.674981786 0.67494861 0.674965198 2.35E-05 for FBtr0089307|FBtr0089304|FBtr0089310|FBtr0089312|FBtr0089306|FBtr0089308|FBtr0089309|FBtr0100363 3622072|3622072|3622072|3622072|3622072|3622072|3622072|3622072 3622777|3622777|3622777|3622777|3622777|3622777|3622777|3622777 2L - 3622326 3622437 3'utr for FlyBase G7353.1 TGTGTCTAGTTCGCTTGGAATTGATGTAAATTGTAAGTAGGTCTGTGACTCTGTTTCAGAGCTCTGTTAGCCATGTGCATTGTATAAATTCAGCTATTTGTATCTATTAAAT 19 3622422 0.990417228 8 17 176 0.92 1.361727836 0.24 0.210526316 0.4 19 2 0 23 2L:3622326-3622437 8 for FBtr0100363|FBtr0089306|FBtr0089308|FBtr0089309|FBtr0089310|FBtr0089312|FBtr0089307|FBtr0089304 3622072|3622072|3622072|3622072|3622072|3622072|3622072|3622072 3622777|3622777|3622777|3622777|3622777|3622777|3622777|3622777 GGAATTGA 8mer-A1 dme-miR-932-5p 2L - 3622394 3622443 3'utr for FlyBase G5751.1 GATATATGTGTCTAGTTCGCTTGGAATTGATGTAAATTGTAAGTAGGTCT 7 3622422 0.992924074 3 5 69 0.888888889 0.903089987 0.222222222 0.142857143 0.333333333 7 1 0 8 2L:3622394-3622443 8 10 512 FBgn0000721 694.3333333 18.66333333 28.79666667 0.014402304 0.535809966 0.347262415 1 1 1 0.15 dme-bantam-3p 6mer3-8 TGATCT 2L 3622683 3622688 - 2L_3622683_3622688_- 0.964659539 0.962924503 0.963792021 0.00122683 for FBtr0089307|FBtr0089304|FBtr0089310|FBtr0089312|FBtr0089306|FBtr0089308|FBtr0089309|FBtr0100363|FBtr0301399 3622072|3622072|3622072|3622072|3622072|3622072|3622072|3622072|3622615 3622777|3622777|3622777|3622777|3622777|3622777|3622777|3622777|3622777 2L - 3622657 3622710 5'utr for FlyBase G7355.1 ATGAAAGCCAGGGAAGAAAAATTGATCTTAAGTGCGCCATATGTACGCCAAAGC 111 3622689 0.961736445 4 110 552 0.992 1.792391689 0.24 0.108108108 0.208 111 0 1 124 2L:3622657-3622710 6 for FBtr0100363|FBtr0301399|FBtr0089306|FBtr0089308|FBtr0089309|FBtr0089310|FBtr0089312|FBtr0089307|FBtr0089304 3622072|3622615|3622072|3622072|3622072|3622072|3622072|3622072|3622072 3622777|3622777|3622777|3622777|3622777|3622777|3622777|3622777|3622777 TGATCT 6mer3-8 dme-bantam-3p 2L - 3622654 3622706 5'utr for FlyBase G5752.1 AAGCCAGGGAAGAAAAATTGATCTTAAGTGCGCCATATGTACGCCAAAGCCAA 83 3622689 0.960144891 4 79 388 0.966101695 1.45484486 0.288135593 0.337349398 0.533898305 83 1 3 114 2L:3622654-3622706 6 96 513 FBgn0000721 694.3333333 18.66333333 28.79666667 0.138262122 5.143775674 3.33371918 1 1 1 0.15 dme-miR-305-5p 8mer-m1 AGTACAAT 2L 3783588 3783595 + 2L_3783588_3783595_+ 0.570208207 0.570305236 0.570256721 6.86E-05 bowl FBtr0307029|FBtr0077490|FBtr0307027|FBtr0077492|FBtr0077491|FBtr0077493|FBtr0307028 3783283|3783283|3783283|3783283|3783283|3783283|3783283 3784121|3784121|3784121|3784121|3784121|3784121|3784121 2L + 3783564 3783645 3'utr bowl FlyBase G1619.1 TAGATCTACAATTTAATACTTTTTAGTACAATGTCTAGGCAAGGCAATAGACCTAAACTAAGTAATAAAATCAGTTAAGCGA 121 3783586 0.989399388 13 111 1090 0.935714286 1.8162413 0.192857143 0.123966942 0.242857143 121 8 1 131 2L:3783564-3783645 8 bowl FBtr0077491|FBtr0077493|FBtr0307028|FBtr0307029|FBtr0077490|FBtr0307027|FBtr0077492 3783283|3783283|3783283|3783283|3783283|3783283|3783283 3784121|3784121|3784121|3784121|3784121|3784121|3784121 AGTACAAT 8mer-m1 dme-miR-305-5p 2L + 3783538 3783704 3'utr bowl FlyBase G1283.1 GACCCACAAGTACATTAAAATAAATTTAGATCTACAATTTAATACTTTTTAGTACAATGTCTAGGCAAGGCAATAGACCTAAACTAAGTAATAAAATCAGTTAAGCGATAATTGTAAGCGAAACAAACTCCGTTGTTGCATTTTATAGAGCTCTTATGCGTTAGGAT 171 3783586 0.834758409 17 161 1556 0.937743191 1.603865792 0.155642023 0.385964912 0.591439689 171 11 5 241 2L:3783538-3783704 8 92.5 514 FBgn0004893 346.31 11.79 17.92333333 0.26710173 7.845631891 5.160870374 2 2 2 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 2L 3783674 3783680 + 2L_3783674_3783680_+ 0.618975044 0.618383417 0.618679231 0.000418324 bowl FBtr0307029|FBtr0077490|FBtr0307027|FBtr0077492|FBtr0077491|FBtr0077493|FBtr0307028 3783283|3783283|3783283|3783283|3783283|3783283|3783283 3784121|3784121|3784121|3784121|3784121|3784121|3784121 2L + 3783646 3783859 3'utr bowl FlyBase G1619.2 TAATTGTAAGCGAAACAAACTCCGTTGTTGCATTTTATAGAGCTCTTATGCGTTAGGATTTTAGCTTAAATCTACCGATTTAAATGTTTAAGCCTTTAGTACGAGAGTCTATCGATTAGTTTTTAATGTGTGGCCCAACACTAAGTGTTGCTGTTTGCTGAGTGAATTCCAATTTTTTATTTATGTTTCCTTATCCGGTAAGCTAATCTTAATG 182 3783673 0.98939516 33 169 1736 0.925925926 1.698970004 0.162037037 0.159340659 0.291666667 182 13 3 200 2L:3783646-3783859 7 bowl FBtr0077491|FBtr0077493|FBtr0307028|FBtr0307029|FBtr0077490|FBtr0307027|FBtr0077492 3783283|3783283|3783283|3783283|3783283|3783283|3783283 3784121|3784121|3784121|3784121|3784121|3784121|3784121 TGCATTT 7mer-m8 dme-miR-277-3p 2L + 3783538 3783704 3'utr bowl FlyBase G1283.1 GACCCACAAGTACATTAAAATAAATTTAGATCTACAATTTAATACTTTTTAGTACAATGTCTAGGCAAGGCAATAGACCTAAACTAAGTAATAAAATCAGTTAAGCGATAATTGTAAGCGAAACAAACTCCGTTGTTGCATTTTATAGAGCTCTTATGCGTTAGGAT 171 3783673 0.834758409 17 161 1556 0.937743191 1.603865792 0.155642023 0.385964912 0.591439689 171 11 5 241 2L:3783538-3783704 7 102.5 515 FBgn0004893 346.31 11.79 17.92333333 0.295977592 8.693808312 5.718802306 1 1 1 0.15 dme-miR-7-5p 7mer-m8 GTCTTCC 2L 3784044 3784050 + 2L_3784044_3784050_+ 0.705948155 0.705937798 0.705942977 7.35E-06 bowl FBtr0307029|FBtr0077490|FBtr0307027|FBtr0077492|FBtr0077491|FBtr0077493|FBtr0307028 3783283|3783283|3783283|3783283|3783283|3783283|3783283 3784121|3784121|3784121|3784121|3784121|3784121|3784121 2L + 3784018 3784101 3'utr bowl FlyBase G1620.1 ATATAAGCAACCCATAGAATTCCATGGTCTTCCTTCAATTTTAAATGATTTTATTCAAACCATAGCGAGTTAGTTGATTTCAAA 138 3784042 0.773076778 12 130 1064 0.947368421 1.364416975 0 0.195652174 0.350877193 138 3 6 162 2L:3784018-3784101 7 bowl FBtr0077491|FBtr0077493|FBtr0307028|FBtr0307029|FBtr0077490|FBtr0307027|FBtr0077492 3783283|3783283|3783283|3783283|3783283|3783283|3783283 3784121|3784121|3784121|3784121|3784121|3784121|3784121 GTCTTCC 7mer-m8 dme-miR-7-5p 2L + 3784016 3784103 3'utr bowl FlyBase G1286.1 TAATATAAGCAACCCATAGAATTCCATGGTCTTCCTTCAATTTTAAATGATTTTATTCAAACCATAGCGAGTTAGTTGATTTCAAATA 119 3784042 0.783192276 12 118 966 0.994444444 2.252853031 0.016666667 0.411764706 0.611111111 119 1 0 179 2L:3784016-3784103 7 119.5 516 FBgn0004893 346.31 11.79 17.92333333 0.345066559 10.13570823 6.667286591 2 2 2 0.15 dme-miR-283-5p 7mer-A1 GATATTA 2L 408978 408984 - 2L_408978_408984_- 0.782370212 0.779698077 0.781034145 0.00188946 AP-2alpha FBtr0089489|FBtr0089488 408874|408028 409387|409387 2L - 408959 409019 3'utr AP-2alpha FlyBase G6532.1 TATATTGTTGCATCATTTCGAGGCAGTAGCAATTGGATATTATATACCTATATACAGATCT 25 408987 0.832907339 7 21 188 0.892857143 1.397940009 0.214285714 0.12 0.214285714 25 3 0 25 2L:408959-409019 7 AP-2alpha FBtr0089488|FBtr0089489 408028|408874 409387|409387 GATATTA 7mer-A1 dme-miR-283-5p 2L - 408961 408999 3'utr AP-2alpha FlyBase G5105.1 AGGCAGTAGCAATTGGATATTATATACCTATATACAGAT 5 408979 0.996005565 2 2 31 0.461538462 0.77815125 0 0.8 0.923076923 5 7 0 6 2L:408961-408999 7 8.5 517 FBgn0264855 2009.92 51.58333333 79.16333333 0.004229024 0.164781906 0.107372942 3 -5 -1 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA 2L 417785 417792 + 2L_417785_417792_+ 0.624136184 0.624318666 0.624227425 0.000129047 ebi FBtr0078055 417633 418536 2L + 417764 417810 3'utr ebi FlyBase G752.1 TTTTACTTTTGATTCAAAAATTGCATTTAACTATATTTTTTAAAGAA 78 417784 0.876237012 2 76 713 0.989130435 1.658011397 0 0.153846154 0.282608696 78 0 1 91 2L:417764-417810 8 ebi FBtr0078055 417633 418536 TGCATTTA 8mer-A1 dme-miR-277-3p 2L + 417765 417813 3'utr ebi FlyBase G603.1 TTTACTTTTGATTCAAAAATTGCATTTAACTATATTTTTTAAAGAAGTG 50 417784 0.867074054 3 49 428 0.97260274 1.851258349 0.02739726 0.44 0.616438356 50 2 0 71 2L:417765-417813 8 63 518 FBgn0263933 724.51 26.33666667 40.32333333 0.086955322 2.392102266 1.562370836 1 1 1 0.15 dme-miR-317-5p 6mer2-7 TATCCC 2L 417893 417898 + 2L_417893_417898_+ 0.808031971 0.919455723 0.863743847 0.078788454 ebi FBtr0078055 417633 418536 2L + 417845 418008 3'utr ebi FlyBase G753.1 AGTCGATTTGGATCTGGAGTCCGGACCTTAGGTAACTCCTTTCTTAGCTATCCCGCCCTGCAATCGTATTTGTAATTGCTTTAAATTCTAATTAGTTCTTTAAGGTATACCTCTTGAGATGAGATCCTCCCGCTTTTGTCCACGTCTATTTCGTACGCTTAGTT 76 417895 0.823181114 19 74 560 0.977272727 1.934498451 0.068181818 0.131578947 0.25 76 2 0 86 2L:417845-418008 6 ebi FBtr0078055 417633 418536 TATCCC 6mer2-7 dme-miR-317-5p 2L + 417841 417912 3'utr ebi FlyBase G604.1 CATAAGTCGATTTGGATCTGGAGTCCGGACCTTAGGTAACTCCTTTCTTAGCTATCCCGCCCTGCAATCGTA 35 417895 0.773981067 12 34 234 1 1.681241237 0.145833333 0.371428571 0.541666667 35 0 0 48 2L:417841-417912 6 39 519 FBgn0263933 724.51 26.33666667 40.32333333 0.053829485 1.480825212 0.967181946 -2 -2 -2 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 2L 418174 418180 + 2L_418174_418180_+ 0.499939448 0.58629155 0.543115499 0.061060226 ebi FBtr0078055 417633 418536 2L + 418153 418230 3'utr ebi FlyBase G755.1 GAAAATCGTTTAGTATAACTTTGCATTTTGTTATTGTATCGATCAAAGATGCCAGCCAACTCCCCGCCCTCCCCACCA 33 418202 0.968361584 4 29 182 0.923076923 1.255272505 0.025641026 0.151515152 0.282051282 33 2 1 36 2L:418153-418230 7 ebi FBtr0078055 417633 418536 TGCATTT 7mer-m8 dme-miR-277-3p 2L + 418164 418227 3'utr ebi FlyBase G608.1 AGTATAACTTTGCATTTTGTTATTGTATCGATCAAAGATGCCAGCCAACTCCCCGCCCTCCCCA 11 418202 0.994714044 2 11 67 1 1.176091259 0 0.363636364 0.533333333 11 0 0 15 2L:418164-418227 7 8 520 FBgn0263933 724.51 26.33666667 40.32333333 0.011041946 0.303759018 0.198396297 -28 -28 -28 0.15 dme-miR-283-5p 6mer3-8 TGATAT 2L 4345260 4345265 + 2L_4345260_4345265_+ 0.988506171 0.993415909 0.99096104 0.003471682 Atet FBtr0112898|FBtr0077426|FBtr0112899|FBtr0077427 4344479|4344479|4344479|4344479 4345776|4345411|4345776|4345411 2L + 4345233 4345272 3'utr Atet FlyBase G1645.1 ATCGGAGAAGGGAACCTGGCCAACTGGTGATATAAAGCAA 35 4345257 0.940023133 3 34 137 0.972222222 1.544068044 0.388888889 0.028571429 0.055555556 35 1 0 35 2L:4345233-4345272 6 Atet FBtr0112898|FBtr0077426|FBtr0112899|FBtr0077427 4344479|4344479|4344479|4344479 4345776|4345411|4345776|4345411 TGATAT 6mer3-8 dme-miR-283-5p 2L + 4345233 4345270 3'utr Atet FlyBase G1303.1 ATCGGAGAAGGGAACCTGGCCAACTGGTGATATAAAGC 17 4345257 0.774797544 4 17 62 1 1.431363764 0.037037037 0.470588235 0.666666667 17 0 0 27 2L:4345233-4345270 6 25 521 FBgn0020762 413.91 11.67333333 17.79666667 0.060399604 2.141633352 1.404757445 3 3 3 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 2L 4345324 4345330 + 2L_4345324_4345330_+ 0.521137189 0.521118756 0.521127972 1.30E-05 Atet FBtr0112898|FBtr0077426|FBtr0112899|FBtr0077427 4344479|4344479|4344479|4344479 4345776|4345411|4345776|4345411 2L + 4345274 4345349 3'utr Atet FlyBase G1646.1 TACTATTTTTACGATGGGATGCAATCGGATTTGTGTTAGCTGCGCGTATTTGTGATTATTACATTTTAATTTAGTA 254 4345323 0.973262597 18 247 2579 0.973684211 1.86923172 0.006578947 0.177165354 0.3125 254 5 3 296 2L:4345274-4345349 7 Atet FBtr0112898|FBtr0077426|FBtr0112899|FBtr0077427 4344479|4344479|4344479|4344479 4345776|4345411|4345776|4345411 TGTGATT 7mer-m1 dme-miR-308-3p 2L + 4345271 4345348 3'utr Atet FlyBase G1304.1 AATTACTATTTTTACGATGGGATGCAATCGGATTTGTGTTAGCTGCGCGTATTTGTGATTATTACATTTTAATTTAGT 164 4345323 0.796964753 19 152 1701 0.926829268 1.316542162 0.040650407 0.353658537 0.569105691 164 8 10 228 2L:4345271-4345348 7 196 522 FBgn0020762 413.91 11.67333333 17.79666667 0.473532894 16.79040548 11.01329837 1 1 1 0.15 dme-miR-980-3p 6mer3-8 GGCAGC 2L 4345435 4345440 + 2L_4345435_4345440_+ 0.999208113 0.999199418 0.999203765 6.15E-06 Atet FBtr0112898|FBtr0112899 4344479|4344479 4345776|4345776 2L + 4345413 4345453 3'utr Atet FlyBase G1647.1 AACAGCACGCTCTCCTTCCTTCGGCAGCCACACCCAAAGTA 15 4345433 0.960407463 2 15 75 1 1.278753601 0.105263158 0.2 0.368421053 15 0 0 19 2L:4345413-4345453 6 Atet FBtr0112898|FBtr0112899 4344479|4344479 4345776|4345776 GGCAGC 6mer3-8 dme-miR-980-3p 2L + 4345416 4345453 3'utr Atet FlyBase G1306.1 AGCACGCTCTCCTTCCTTCGGCAGCCACACCCAAAGTA 7 4345433 0.904276849 2 6 31 0.833333333 1 0 0.571428571 0.75 7 2 0 10 2L:4345416-4345453 6 11 523 FBgn0020762 413.91 11.67333333 17.79666667 0.026575826 0.942318675 0.618093276 2 2 2 0.15 dme-miR-986-5p 6mer3-8 ATTCGA 2L 4382994 4382999 - 2L_4382994_4382999_- 0.905710483 0.689788797 0.79774964 0.152679698 CG3338 FBtr0077462 4382923 4383136 2L - 4382956 4383048 3'utr CG3338 FlyBase G7439.1 AGGTCTATCCGGTTTATATGGTTGGTATGTTTTAAGACAGCTATGGAACATTCGATTTTGTATTATTCGCAATCCATCCGCCTATTTTAAATA 14 4382983 0.987462135 9 13 123 1 1.322219295 0.142857143 0.428571429 0.619047619 14 0 0 21 2L:4382956-4383048 6 CG3338 FBtr0077462 4382923 4383136 ATTCGA 6mer3-8 dme-miR-986-5p 2L - 4382961 4382999 3'utr CG3338 FlyBase G5811.1 ATTCGATTTTGTATTATTCGCAATCCATCCGCCTATTTT 8 4382992 0.954036074 5 8 71 1 0.903089987 0.5 0 0 8 0 0 8 2L:4382961-4382999 6 5.5 524 FBgn0031598 254.6666667 10.37 15.86333333 0.021596859 0.530376085 0.346711494 -16 -7 -11.5 0.15 dme-miR-277-3p 6mer2-7 GCATTT 2L 4399866 4399871 + 2L_4399866_4399871_+ 0.999999782 0.999998012 0.999998897 1.27E-06 l(2)k05819 FBtr0331447|FBtr0305968|FBtr0077432 4399732|4399732|4399732 4400487|4400105|4400105 2L + 4399852 4399882 3'utr l(2)k05819 FlyBase G1665.1 AGTTGTTTCTGTCAGCATTTGTTCTTAGGTG 5 4399871 0.717877533 4 5 50 1 0.698970004 0.2 0 0 5 0 0 5 2L:4399852-4399882 6 l(2)k05819 FBtr0305968|FBtr0331447|FBtr0077432 4399732|4399732|4399732 4400105|4400487|4400105 GCATTT 6mer2-7 dme-miR-277-3p 2L + 4399831 4399877 3'utr l(2)k05819 FlyBase G1323.1 AGTCTGGGTATCCTTAGACGAAGTTGTTTCTGTCAGCATTTGTTCTT 5 4399862 0.991013988 4 5 53 1 0.903089987 0.125 0.4 0.625 5 0 0 8 2L:4399831-4399877 6 4.5 525 FBgn0022153 937.2133333 22.65666667 34.38 0.004801468 0.198617037 0.130890052 -5 4 -0.5 0.15 dme-miR-184-5p 6mer3-8 TGATAA 2L 4446696 4446701 - 2L_4446696_4446701_- 0.991929687 0.992962291 0.992445989 0.000730158 MFS18 FBtr0077456 4446668 4446987 2L - 4446687 4446752 3'utr MFS18 FlyBase G7461.1 TATATATTTAAGAGAGTAGTTTTAAGTAGCGAAATCTTACTGCTCCTAGCGTGATAAAATACAAAT 36 4446707 0.982377547 8 32 242 0.897959184 1.342422681 0.163265306 0.25 0.448979592 36 4 1 44 2L:4446687-4446752 6 MFS18 FBtr0077456 4446668 4446987 TGATAA 6mer3-8 dme-miR-184-5p 2L - 4446677 4446743 3'utr MFS18 FlyBase G5821.1 AAGAGAGTAGTTTTAAGTAGCGAAATCTTACTGCTCCTAGCGTGATAAAATACAAATATTTAATCCT 24 4446706 0.818101911 7 21 169 0.875 0.970036777 0.21875 0.291666667 0.46875 24 2 2 28 2L:4446677-4446743 6 24.5 526 FBgn0025684 397.49 26.06 39.8 0.061636771 0.940138143 0.615577889 6 5 5.5 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 2L 4461630 4461635 + 2L_4461630_4461635_+ 0.999867288 0.999974796 0.999921042 7.60E-05 CG15435 FBtr0077441|FBtr0345632 4461558|4461558 4461746|4461746 2L + 4461612 4461645 3'utr CG15435 FlyBase G1682.1 TGTTGACCACTTTGCATCTGTGTTTTTGTCGTAT 13 4461628 0.793264365 3 11 146 0.882352941 1.176091259 0.294117647 0.307692308 0.470588235 13 2 0 15 2L:4461612-4461645 6 CG15435 FBtr0345632|FBtr0077441 4461558|4461558 4461746|4461746 TGTGTT 6mer3-8 dme-miR-317-3p 2L + 4461611 4461648 3'utr CG15435 FlyBase G1333.1 ATGTTGACCACTTTGCATCTGTGTTTTTGTCGTATTGT 9 4461628 0.753238236 4 8 95 0.923076923 1.079181246 0.153846154 0.333333333 0.538461538 9 1 0 12 2L:4461611-4461648 6 10 527 FBgn0031608 120.9866667 8.103333333 12.34333333 0.082653736 1.234060058 0.810153929 2 2 2 0.15 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 447725 447732 + 2L_447725_447732_+ 0.477955723 0.630928277 0.554442 0.108167963 ex FBtr0329832|FBtr0078059 447248|447248 448701|448701 2L + 447696 447761 3'utr ex FlyBase G791.1 AAATACACATTCAAATAATCAGAACCCAGTCTAGTCACTTAAGGGAATTGGTAACGTAACCACAGC 33 447734 0.657979396 9 31 162 0.906976744 0.892094603 0.046511628 0.181818182 0.372093023 33 0 4 39 2L:447696-447761 8 ex FBtr0329832|FBtr0078059 447248|447248 448701|448701 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L + 447691 447744 3'utr ex FlyBase G632.1 CCTCAAAATACACATTCAAATAATCAGAACCCAGTCTAGTCACTTAAGGGAATT 31 447725 0.959012801 6 29 140 0.95 1.278753601 0.025 0.258064516 0.425 31 1 1 38 2L:447691-447744 8 29 528 FBgn0004583 1742.906667 31.79333333 48.95666667 0.016638871 0.91214091 0.592360591 -9 0 -4.5 0.15 dme-miR-968-5p 7mer-m8 ACTACTT 2L 4478001 4478007 - 2L_4478001_4478007_- 0.400156402 0.439194495 0.419675448 0.027604105 dp FBtr0332354|FBtr0332350|FBtr0332348|FBtr0332349|FBtr0332352|FBtr0332345|FBtr0305142|FBtr0332351 4477460|4477460|4477460|4477460|4477460|4477460|4477460|4477460 4479537|4479537|4479537|4479537|4479537|4479537|4479537|4479537 2L - 4477973 4478033 3'utr dp FlyBase G7506.1 ATTAAACGTAAACAAAATGTATAGTCACTACTTTAAGAAGAAAGAGAAATTTTCTTTATAG 15 4478015 0.902368574 4 13 112 0.894736842 0.929418926 0.105263158 0.2 0.368421053 15 1 1 17 2L:4477973-4478033 7 dp FBtr0332348|FBtr0332352|FBtr0305142|FBtr0332351|FBtr0332349|FBtr0332354|FBtr0332345|FBtr0332350 4477460|4477460|4477460|4477460|4477460|4477460|4477460|4477460 4479537|4479537|4479537|4479537|4479537|4479537|4479537|4479537 ACTACTT 7mer-m8 dme-miR-968-5p 2L - 4477993 4478030 3'utr dp FlyBase G5849.1 AAACGTAAACAAAATGTATAGTCACTACTTTAAGAAGA 14 4478015 0.815687082 4 14 101 1 1.301029996 0.05 0.285714286 0.5 14 0 0 20 2L:4477993-4478030 7 13 529 FBgn0053196 31 0.07 0.11 0.419354839 185.7142857 118.1818182 8 8 8 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 2L 4478340 4478346 - 2L_4478340_4478346_- 0.48950504 0.463054141 0.47627959 0.018703611 dp FBtr0332354|FBtr0332350|FBtr0332348|FBtr0332349|FBtr0332352|FBtr0332345|FBtr0305142|FBtr0332351 4477460|4477460|4477460|4477460|4477460|4477460|4477460|4477460 4479537|4479537|4479537|4479537|4479537|4479537|4479537|4479537 2L - 4478307 4478383 3'utr dp FlyBase G7507.1 ATTTTTGTAGTTTTATAGTCAATTAATATTAAATTGTTGTGATTGTTTTTAATGCAAAAGAGATACTTCCACTAACT 30 4478340 0.992832346 8 29 344 0.973684211 1.568201724 0.184210526 0.2 0.368421053 30 1 0 37 2L:4478307-4478383 7 dp FBtr0332348|FBtr0332352|FBtr0305142|FBtr0332351|FBtr0332349|FBtr0332354|FBtr0332345|FBtr0332350 4477460|4477460|4477460|4477460|4477460|4477460|4477460|4477460 4479537|4479537|4479537|4479537|4479537|4479537|4479537|4479537 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 4478320 4478375 3'utr dp FlyBase G5850.1 AGTTTTATAGTCAATTAATATTAAATTGTTGTGATTGTTTTTAATGCAAAAGAGAT 25 4478340 0.883336653 8 25 286 1 1.544068044 0.114285714 0.32 0.514285714 25 0 0 35 2L:4478320-4478375 7 23.5 530 FBgn0053196 31 0.07 0.11 0.758064516 335.7142857 213.6363636 -6 -6 -6 0.15 dme-miR-34-5p 7mer-A1 ACTGCCA 2L 4478549 4478555 - 2L_4478549_4478555_- 0.823262294 0.823349456 0.823305875 6.17E-05 dp FBtr0332354|FBtr0332350|FBtr0332348|FBtr0332349|FBtr0332352|FBtr0332345|FBtr0305142|FBtr0332351 4477460|4477460|4477460|4477460|4477460|4477460|4477460|4477460 4479537|4479537|4479537|4479537|4479537|4479537|4479537|4479537 2L - 4478534 4478579 3'utr dp FlyBase G7509.1 AATCGTTGAGGGAACATAACTATAACTGCCACTGAGGCGTCATCAG 7 4478557 0.96277779 4 7 37 1 0.954242509 0.222222222 0.285714286 0.444444444 7 0 0 9 2L:4478534-4478579 7 dp FBtr0332348|FBtr0332352|FBtr0305142|FBtr0332351|FBtr0332349|FBtr0332354|FBtr0332345|FBtr0332350 4477460|4477460|4477460|4477460|4477460|4477460|4477460|4477460 4479537|4479537|4479537|4479537|4479537|4479537|4479537|4479537 ACTGCCA 7mer-A1 dme-miR-34-5p 2L - 4478528 4478572 3'utr dp FlyBase G5852.1 GAGGGAACATAACTATAACTGCCACTGAGGCGTCATCAGCGCACA 12 4478557 0.71301643 2 10 55 0.928571429 1.113943352 0.642857143 0.166666667 0.285714286 12 1 0 13 2L:4478528-4478572 7 9 531 FBgn0053196 31 0.07 0.11 0.290322581 128.5714286 81.81818182 2 2 2 0.15 dme-miR-968-5p 7mer-m8 ACTACTT 2L 447935 447941 + 2L_447935_447941_+ 0.621688375 0.621568941 0.621628658 8.45E-05 ex FBtr0329832|FBtr0078059 447248|447248 448701|448701 2L + 447898 447979 3'utr ex FlyBase G792.2 TACTTAGTTAGGCCAGAAATGCGAATACTTAAAACTAACTACTTCCGCCCAAACAACTGTGATTGATTTTTATTTAAACTTA 2898 447940 0.9175729 20 2867 12252 0.990640953 2.543198586 0.033465683 0.178743961 0.32501418 2898 24 9 3493 2L:447898-447979 7 ex FBtr0329832|FBtr0078059 447248|447248 448701|448701 ACTACTT 7mer-m8 dme-miR-968-5p 2L + 447895 447978 3'utr ex FlyBase G634.1 AAATACTTAGTTAGGCCAGAAATGCGAATACTTAAAACTAACTACTTCCGCCCAAACAACTGTGATTGATTTTTATTTAAACTT 1793 447940 0.847468128 16 1743 7292 0.97739066 2.46686762 0.026315789 0.357501394 0.57301705 1793 53 8 2637 2L:447895-447978 7 2137 532 FBgn0004583 1742.906667 31.79333333 48.95666667 1.226112701 67.21534913 43.65084769 -5 -5 -5 0.15 dme-miR-31a-5p 6mer2-7 CTTGCC 2L 448212 448217 + 2L_448212_448217_+ 0.950861448 0.945560269 0.948210858 0.003748444 ex FBtr0329832|FBtr0078059 447248|447248 448701|448701 2L + 448189 448260 3'utr ex FlyBase G794.2 AAAGAATTTCAAGAGTGCCTAGACTTGCCCTCCATCCCCACCATAGTAATAAGCGAGAGATGATTATCATTT 270 448214 0.763266071 11 264 1407 0.976744186 2.46834733 0.172757475 0.1 0.19269103 270 7 0 294 2L:448189-448260 6 ex FBtr0329832|FBtr0078059 447248|447248 448701|448701 CTTGCC 6mer2-7 dme-miR-31a-5p 2L + 448181 448271 3'utr ex FlyBase G635.1 AGGGAACTAAAGAATTTCAAGAGTGCCTAGACTTGCCCTCCATCCCCACCATAGTAATAAGCGAGAGATGATTATCATTTATTTTTTGTAT 152 448214 0.947407549 8 148 791 0.974248927 2.356025857 0.111587983 0.394736842 0.605150215 152 6 0 227 2L:448181-448271 6 200 533 FBgn0004583 1742.906667 31.79333333 48.95666667 0.114750838 6.290626966 4.085245455 -2 -2 -2 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 448867 448873 - 2L_448867_448873_- 0.798403401 0.798617809 0.798510605 0.000151604 crq FBtr0078087|FBtr0078087|FBtr0078087|FBtr0331233|FBtr0331233|FBtr0331233 448252|448252|448252|448252|448252|448252 449020|449020|449020|449020|449020|449020 2L - 448816 449139 stop_codon crq FlyBase G6564.1 TATTCGGCTATTCCATGATAGCTTTTGCCAGTGTCTTTCTCATCACCGGCATCACGCTGACTGTGACGAAAAAGTGGGTGCGGCGAACTCCCGAGGATGAGGACATACTTACCAACTAGAGCAAAATAGTTTTTAAGCTTTGCCAAAGTGCCAGGAATTGTTAACTCTCCTAGTTCATTCTGATAGTCGCCCGTCAAATGCTGTTCTTTGTCAGTTATGCGTTATGTAATATGTAAGTGATACGAATCGACGTTCGTCTTGCAGTTTGTGATAGCAAAACCTACTCTAAAAAAAAAACTAAAAACTACTCTAACTCTAAAAAAA 807 448874 0.937649723 54 760 6212 0.944265809 1.564764667 0.175777063 0.133828996 0.250803859 807 29 23 881 2L:448816-449139 7 crq FBtr0331232|FBtr0331232|FBtr0331232|FBtr0078088|FBtr0078088|FBtr0078088|FBtr0078087|FBtr0078087|FBtr0078087|FBtr0331233|FBtr0331233|FBtr0331233|FBtr0304741|FBtr0304741|FBtr0304741 448714|448714|448714|448714|448714|448714|448252|448252|448252|448252|448252|448252|448714|448714|448714 449020|449020|449020|449020|449020|449020|449020|449020|449020|449020|449020|449020|449020|449020|449020 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 448819 449017 3'utr crq FlyBase G5128.1 AAAATAGTTTTTAAGCTTTGCCAAAGTGCCAGGAATTGTTAACTCTCCTAGTTCATTCTGATAGTCGCCCGTCAAATGCTGTTCTTTGTCAGTTATGCGTTATGTAATATGTAAGTGATACGAATCGACGTTCGTCTTGCAGTTTGTGATAGCAAAACCTACTCTAAAAAAAAAACTAAAAACTACTCTAACTCTAAAA 473 448874 0.938145021 44 452 3729 0.952574526 1.700827289 0.185636856 0.412262156 0.623306233 473 22 13 703 2L:448819-449017 7 372.5 534 FBgn0015924 1407.533333 61.27666667 93.41333333 0.264647374 6.07898602 3.98765344 1 1 1 0.15 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 458977 458984 - 2L_458977_458984_- 0.609315251 0.451730343 0.530522797 0.111429422 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 458932 459036 3'utr CG4297 FlyBase G6576.1 ACATATATGTCTGTAACTCTATACTTTTAAATCGGAGGTTTTCACTGTACCTTAGCTTTAAGATTTGTGACTTTATCAATGTGAGTGTCTTTGAGCAAACAAAAC 32 458985 0.990795798 16 31 320 0.972972973 1.556302501 0.162162162 0.15625 0.27027027 32 1 0 36 2L:458932-459036 8 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 458940 459008 3'utr CG4297 FlyBase G5137.1 AAATCGGAGGTTTTCACTGTACCTTAGCTTTAAGATTTGTGACTTTATCAATGTGAGTGTCTTTGAGCA 16 458985 0.950431636 8 13 145 0.857142857 1.255272505 0.142857143 0.3125 0.476190476 16 3 0 18 2L:458940-459008 8 17.5 535 FBgn0031258 226.3333333 3.93 5.996666667 0.077319588 4.452926209 2.918287938 1 1 1 0.15 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 459178 459185 - 2L_459178_459185_- 0.625122448 0.625140608 0.625131528 1.29E-05 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 459149 459233 3'utr CG4297 FlyBase G6578.1 AGCTTCTAAATGTATGTTCATTCGTTGGTAACTTTTACGACTAAGTAATACGCTTAATTTTAGTACAAACAAAATACAAAGTGCA 32 459185 0.98377861 10 32 245 1 1.579783597 0.105263158 0.1875 0.315789474 32 0 0 38 2L:459149-459233 8 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 TACGCTTA 8mer-A1 dme-miR-965-3p 2L - 459158 459234 3'utr CG4297 FlyBase G5138.1 AAGCTTCTAAATGTATGTTCATTCGTTGGTAACTTTTACGACTAAGTAATACGCTTAATTTTAGTACAAACAAAATA 17 459185 0.964547922 6 16 130 0.875 1.322219295 0.083333333 0.294117647 0.5 17 3 0 21 2L:459158-459234 8 19.5 536 FBgn0031258 226.3333333 3.93 5.996666667 0.086156112 4.961832061 3.251806559 0 0 0 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 2L 459276 459281 - 2L_459276_459281_- 0.959295466 0.957811245 0.958553356 0.001049559 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 459257 459300 3'utr CG4297 FlyBase G6579.1 CTTTTTCTCGTAACACATTCCAAAGGACCAAACATTTTGAAACT 42 459283 0.716370799 3 42 112 1 1.73239376 0.185185185 0.261904762 0.425925926 42 0 0 54 2L:459257-459300 6 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 459253 459294 3'utr CG4297 FlyBase G5139.1 CTCGTAACACATTCCAAAGGACCAAACATTTTGAAACTAATA 35 459283 0.883890613 2 34 93 1 1.72427587 0.037735849 0.441176471 0.641509434 34 0 0 53 2L:459253-459294 6 37 537 FBgn0031258 226.3333333 3.93 5.996666667 0.1634757 9.41475827 6.170094497 2 2 2 0.15 dme-bantam-3p 6mer3-8 TGATCT 2L 459745 459750 - 2L_459745_459750_- 0.948689465 0.929868883 0.939279174 0.013308174 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 459668 459767 3'utr CG4297 FlyBase G6582.1 CATCTGTTGCAATTGTTTGATCTGTTAGTAGCCGAAGACTTTGTTTTAGTGCAATTATTTGTTAGGTTCCTAGAGCAATTTGTTGTGTTTATTTTAAGAT 44 459726 0.770975045 15 43 409 0.979166667 1.672097858 0.104166667 0.090909091 0.166666667 44 1 0 47 2L:459668-459767 6 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 TGATCT 6mer3-8 dme-bantam-3p 2L - 459684 459768 3'utr CG4297 FlyBase G5141.1 ACATCTGTTGCAATTGTTTGATCTGTTAGTAGCCGAAGACTTTGTTTTAGTGCAATTATTTGTTAGGTTCCTAGAGCAATTTGTT 47 459726 0.989408011 12 44 424 0.947368421 1.857332496 0.157894737 0.468085106 0.671052632 47 4 0 72 2L:459684-459768 6 25 538 FBgn0031258 226.3333333 3.93 5.996666667 0.110456554 6.361323155 4.168982768 -24 -24 -24 0.15 dme-miR-33-5p 6mer2-7 AATGCA 2L 459801 459806 - 2L_459801_459806_- 0.903424481 0.860091424 0.881757952 0.030641129 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 459779 459822 3'utr CG4297 FlyBase G6582.2 TAAATTTTTGCCACCAAATGCAGCCTAGACCAAAAACTAAAAGA 25 459804 0.965797943 4 22 68 0.970588235 1.51851394 0 0.375 0.558823529 24 1 0 33 2L:459779-459822 6 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 AATGCA 6mer2-7 dme-miR-33-5p 2L - 459783 459816 3'utr CG4297 FlyBase G5142.1 TTTGCCACCAAATGCAGCCTAGACCAAAAACTAA 19 459804 0.963185869 2 18 52 0.962962963 1.414973348 0.037037037 0.210526316 0.444444444 19 1 0 26 2L:459783-459816 6 20.5 539 FBgn0031258 226.3333333 3.93 5.996666667 0.090574374 5.216284987 3.41856587 -2 -2 -2 0.15 dme-miR-92b-3p 8mer-A1 GTGCAATA 2L 460195 460202 - 2L_460195_460202_- 0.539219271 0.628784377 0.584001824 0.06333209 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 460123 460213 3'utr CG4297 FlyBase G6584.1 TTTAGATATCTGTGCAATATTTACATGGAAAATGTCGTGTTTATCTGGAATGCGCGAATTCGAATCTCGATGGGTAAAGCATGAGTAAGCA 17 460203 0.787901674 8 14 117 0.791666667 1.278753601 0.25 0.352941176 0.541666667 17 5 0 19 2L:460123-460213 8 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 GTGCAATA 8mer-A1 dme-miR-92b-3p 2L - 460190 460220 3'utr CG4297 FlyBase G5145.1 TATATATTTTAGATATCTGTGCAATATTTAC 5 460203 0.795599538 2 4 50 0.888888889 0.903089987 0.111111111 0.4 0.666666667 5 1 0 8 2L:460190-460220 8 5.5 540 FBgn0031258 226.3333333 3.93 5.996666667 0.024300442 1.399491094 0.917176209 1 1 1 0.15 dme-miR-14-3p 6mer3-8 AAGACT 2L 460327 460332 - 2L_460327_460332_- 0.983803287 0.989528402 0.986665844 0.004048257 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 460261 460425 3'utr CG4297 FlyBase G6585.1 ATAAAAGAAACACCACACGTACACTTTAGATACACCACAAAACAAGAAAACTAAAGATATGGATGCAAAAGCAGCTACACTTTACAGAATCTCAAGACTTTTTTTAACATTTGGATTTATTTAAGGAAACGAAATGTAGCGTAATATAGTCATTTTAGGAAAATC 251 460325 0.984723099 25 243 1953 0.974842767 1.889301703 0.034591195 0.219123506 0.383647799 251 5 3 310 2L:460261-460425 6 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 AAGACT 6mer3-8 dme-miR-14-3p 2L - 460273 460382 3'utr CG4297 FlyBase G5146.1 AAGAAAACTAAAGATATGGATGCAAAAGCAGCTACACTTTACAGAATCTCAAGACTTTTTTTAACATTTGGATTTATTTAAGGAAACGAAATGTAGCGTAATATAGTCAT 155 460325 0.987101545 20 150 1308 0.976851852 2.02325246 0.009259259 0.316129032 0.509259259 155 4 1 211 2L:460273-460382 6 172.5 541 FBgn0031258 226.3333333 3.93 5.996666667 0.762150221 43.89312977 28.7659811 -7 -7 -7 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 2L 460494 460501 - 2L_460494_460501_- 0.634996247 0.642245834 0.63862104 0.005126241 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 460451 460525 stop_codon CG4297 FlyBase G6586.1 AAGTCAAATAGGATTGCAGCTTCTACCAAAGATATTTCTGGTCCCTGGACAGGATCAGATGTGTTCGGCTCGTCG 32 460502 0.821810637 9 26 229 0.8 1.146128036 0.085714286 0.0625 0.142857143 32 6 1 28 2L:460451-460525 8 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 460450 460516 stop_codon CG4297 FlyBase G5147.1 AGGATTGCAGCTTCTACCAAAGATATTTCTGGTCCCTGGACAGGATCAGATGTGTTCGGCTCGTCGA 19 460502 0.849296098 7 18 141 0.961538462 1.397940009 0.153846154 0.315789474 0.5 19 1 0 25 2L:460450-460516 8 14.5 542 FBgn0031258 226.3333333 3.93 5.996666667 0.064064801 3.68956743 2.418010006 1 1 1 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2L 4841642 4841648 - 2L_4841642_4841648_- 0.660495382 0.649110744 0.654803063 0.008050199 mxt FBtr0077410|FBtr0332479 4841480|4841480 4842233|4842233 2L - 4841619 4841679 3'utr mxt FlyBase G7575.1 TTTTCAAGATTTGAAATTGTATTTTGTTTTCTCTAGTCTATGCATCATAGAAATTTGTATA 26 4841640 0.993160799 6 24 288 0.931034483 1.431363764 0.137931034 0.115384615 0.206896552 26 2 0 27 2L:4841619-4841679 7 mxt FBtr0332479|FBtr0077410 4841480|4841480 4842233|4842233 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2L - 4841629 4841658 3'utr mxt FlyBase G5894.1 TTTTGTTTTCTCTAGTCTATGCATCATAGA 18 4841640 0.826571868 3 18 178 1 1.361727836 0.217391304 0.277777778 0.434782609 18 0 0 23 2L:4841629-4841658 7 20.5 543 FBgn0031637 825.01 33.64666667 51.55333333 0.024848184 0.609272835 0.39764645 -8 -8 -8 0.15 dme-miR-980-3p 7mer-A1 GCAGCTA 2L 4841919 4841925 - 2L_4841919_4841925_- 0.815543169 0.811315361 0.813429265 0.002989506 mxt FBtr0077410|FBtr0332479 4841480|4841480 4842233|4842233 2L - 4841907 4841940 3'utr mxt FlyBase G7576.1 ACTAATTCAAAAAATGCAGCTAAATGAAAAGCCT 10 4841926 0.935437701 2 7 37 0.818181818 0.954242509 0 0.1 0.181818182 10 2 0 9 2L:4841907-4841940 7 mxt FBtr0332479|FBtr0077410 4841480|4841480 4842233|4842233 GCAGCTA 7mer-A1 dme-miR-980-3p 2L - 4841889 4841937 3'utr mxt FlyBase G5895.1 AATTCAAAAAATGCAGCTAAATGAAAAGCCTCGAAGCGGCCCTAACTTG 16 4841926 0.951671458 3 12 53 0.708333333 1.230448921 0.041666667 0.4375 0.625 16 7 0 17 2L:4841889-4841937 7 10.5 544 FBgn0031637 825.01 33.64666667 51.55333333 0.012727118 0.312066574 0.203672572 1 1 1 0.15 dme-miR-999-3p 6mer3-8 AGTTAA 2L 4841980 4841985 - 2L_4841980_4841985_- 0.99571505 0.99635845 0.99603675 0.000454953 mxt FBtr0077410|FBtr0332479 4841480|4841480 4842233|4842233 2L - 4841976 4842010 3'utr mxt FlyBase G7577.1 AACTAGAAAATTCAACGAAGCTCTTAGTTAAGTTC 26 4841987 0.732248944 2 25 168 1 1.477121255 0 0.153846154 0.266666667 26 0 0 30 2L:4841976-4842010 6 mxt FBtr0332479|FBtr0077410 4841480|4841480 4842233|4842233 AGTTAA 6mer3-8 dme-miR-999-3p 2L - 4841976 4842010 3'utr mxt FlyBase G5896.1 AACTAGAAAATTCAACGAAGCTCTTAGTTAAGTTC 12 4841987 0.712871479 3 11 82 0.941176471 1.204119983 0 0.25 0.470588235 12 1 0 16 2L:4841976-4842010 6 18.5 545 FBgn0031637 825.01 33.64666667 51.55333333 0.022423971 0.549831583 0.358851675 2 2 2 0.15 dme-miR-33-5p 6mer3-8 CAATGC 2L 4842144 4842149 - 2L_4842144_4842149_- 0.963996744 0.999894993 0.981945869 0.025383931 mxt FBtr0077410|FBtr0332477|FBtr0332479|FBtr0077409|FBtr0332478|FBtr0077411 4841480|4842088|4841480|4842088|4842088|4842088 4842233|4842233|4842233|4842233|4842233|4842233 2L - 4842123 4842154 3'utr mxt FlyBase G7578.1 TGCTTCAATGCTTTTGGCCATGGCCACATCTA 6 4842140 0.93276304 3 6 44 1 0.903089987 0.25 0.166666667 0.375 6 0 0 8 2L:4842123-4842154 6 mxt FBtr0332478|FBtr0077411|FBtr0077409|FBtr0332477|FBtr0332479|FBtr0077410 4842088|4842088|4842088|4842088|4841480|4841480 4842233|4842233|4842233|4842233|4842233|4842233 CAATGC 6mer3-8 dme-miR-33-5p 2L - 4842121 4842167 3'utr mxt FlyBase G5897.1 CGGAGCTGCAGTATGCTTCAATGCTTTTGGCCATGGCCACATCTAAC 7 4842141 0.985224607 6 7 52 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 2L:4842121-4842167 6 6.5 546 FBgn0031637 825.01 33.64666667 51.55333333 0.007878692 0.19318407 0.126083021 -9 -8 -8.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 2L 4842812 4842817 - 2L_4842812_4842817_- 0.679287687 0.752608617 0.715948152 0.051845706 mxt FBtr0300941 4842582 4843059 2L - 4842695 4842881 3'utr mxt FlyBase G7581.1 ATCATTATCATTATCATCATCCAGTCATTAGATTAACGACATACCATCGAAACCAAACCGATCGCTAGTCTTAGAGGTAACAATACATATAATGCATTGAAATTAAAATGTAACTATAGGGAGAATCTGTGTTTTGGCTGTGAAACAGATTAAGTCGTCGCTAAGGATAAGCTGGAAAGGCGGTTGA 574 4842811 0.913793421 22 562 3508 0.981077147 2.527629901 0.288209607 0.160278746 0.298398836 574 12 1 674 2L:4842695-4842881 6 mxt FBtr0300941 4842582 4843059 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 2L - 4842695 4842873 3'utr mxt FlyBase G5898.1 CATTATCATCATCCAGTCATTAGATTAACGACATACCATCGAAACCAAACCGATCGCTAGTCTTAGAGGTAACAATACATATAATGCATTGAAATTAAAATGTAACTATAGGGAGAATCTGTGTTTTGGCTGTGAAACAGATTAAGTCGTCGCTAAGGATAAGCTGGAAAGGCGGTTGA 328 4842811 0.933448488 18 320 1968 0.968283582 2.715167358 0.229477612 0.457317073 0.667910448 328 17 0 519 2L:4842695-4842873 6 258 547 FBgn0031637 825.01 33.64666667 51.55333333 0.312723482 7.667921538 5.004526057 -6 -6 -6 0.15 dme-miR-8-3p 7mer-m8 CAGTATT 2L 4842961 4842967 - 2L_4842961_4842967_- 0.661615234 0.661548129 0.661581682 4.74E-05 mxt FBtr0300941 4842582 4843059 2L - 4842915 4843031 3'utr mxt FlyBase G7582.1 AATTTTACGTAGCCGGAATACGTATTATTGAATCTCAGTCACAGATAGGCTTTTCTTTTCATGTCAGTATTTTTGCTGTTTTAATTTTATATAACTTATCATTAAGAAAAGGTGAAG 99 4842970 0.990269486 14 95 956 0.964912281 1.740362689 0.061403509 0.131313131 0.245614035 99 3 1 110 2L:4842915-4843031 7 mxt FBtr0300941 4842582 4843059 CAGTATT 7mer-m8 dme-miR-8-3p 2L - 4842943 4843032 3'utr mxt FlyBase G5899.2 TAATTTTACGTAGCCGGAATACGTATTATTGAATCTCAGTCACAGATAGGCTTTTCTTTTCATGTCAGTATTTTTGCTGTTTTAATTTTA 87 4842979 0.722695713 18 83 801 0.960629921 2.086359831 0.086614173 0.310344828 0.527559055 87 5 0 122 2L:4842943-4843032 7 27 548 FBgn0031637 825.01 33.64666667 51.55333333 0.032726876 0.802456905 0.523729471 3 12 7.5 0.15 dme-miR-318-3p 7mer-A1 CCAGTGA 2L 4903164 4903170 + 2L_4903164_4903170_+ 0.822118898 0.820373751 0.821246324 0.001233972 CG3036 FBtr0077391|FBtr0336832 4903152|4903152 4903889|4903458 2L + 4903132 4903197 stop_codon CG3036 FlyBase G1738.1 GCCCCTCAAGAACGAGAAGTGATTGCACATCGCCAGTGAGACTCATTCGGTGCCACTGCTGTTCGT 43 4903168 0.967037442 4 43 236 1 1.707570176 0.137254902 0.186046512 0.31372549 43 0 0 51 2L:4903132-4903197 7 CG3036 FBtr0077391|FBtr0336832 4903152|4903152 4903889|4903458 CCAGTGA 7mer-A1 dme-miR-318-3p 2L + 4903139 4903211 stop_codon CG3036 FlyBase G1374.1 AAGAACGAGAAGTGATTGCACATCGCCAGTGAGACTCATTCGGTGCCACTGCTGTTCGTGATGAGCGGAAGGA 26 4903168 0.97092299 6 25 147 0.974358974 1.579783597 0.128205128 0.384615385 0.58974359 26 1 0 38 2L:4903139-4903211 7 32 549 FBgn0031645 281.25 12.45666667 19.09 0.113777778 2.568905539 1.676270299 -4 -4 -4 0.15 dme-miR-304-5p 8mer-A1 TGAGATTA 2L 4903289 4903296 + 2L_4903289_4903296_+ 0.623753868 0.624575108 0.624164488 0.000580676 CG3036 FBtr0077391|FBtr0336832 4903152|4903152 4903889|4903458 2L + 4903266 4903313 3'utr CG3036 FlyBase G1739.1 TAAAGTAGTTGTTACTCCCACATTGAGATTACGGGGCTTTCATTTGGC 65 4903288 0.879752084 2 64 520 0.95890411 1.84509804 0.082191781 0.092307692 0.191780822 65 3 0 70 2L:4903266-4903313 8 CG3036 FBtr0077391|FBtr0336832 4903152|4903152 4903889|4903458 TGAGATTA 8mer-A1 dme-miR-304-5p 2L + 4903269 4903311 3'utr CG3036 FlyBase G1375.1 AGTAGTTGTTACTCCCACATTGAGATTACGGGGCTTTCATTTG 32 4903288 0.847297904 4 32 230 1 1.707570176 0.137254902 0.46875 0.666666667 32 0 0 51 2L:4903269-4903311 8 48 550 FBgn0031645 281.25 12.45666667 19.09 0.170666667 3.853358309 2.514405448 1 1 1 0.15 dme-miR-965-3p 6mer2-7 ACGCTT 2L 4947905 4947910 + 2L_4947905_4947910_+ 0.999981892 0.999997506 0.999989699 1.10E-05 betaggt-I FBtr0330714|FBtr0078991 4947866|4947832 4948324|4948324 2L + 4947847 4947930 stop_codon betaggt-I FlyBase G1751.1 AAAGCACGAGGGGAAAGTTAAAGCACACTATTGTATTTATATTGGCCACATTTTAGCCACGCTTTTTATGCCCTTGCAGTTAGT 43 4947911 0.991726943 11 35 385 0.829787234 1.290034611 0.212765957 0.093023256 0.170212766 43 7 1 39 2L:4947847-4947930 6 betaggt-I FBtr0078991|FBtr0330714 4947832|4947866 4948324|4948324 ACGCTT 6mer2-7 dme-miR-965-3p 2L + 4947842 4947930 stop_codon betaggt-I FlyBase G1380.1 CGCACAAAGCACGAGGGGAAAGTTAAAGCACACTATTGTATTTATATTGGCCACATTTTAGCCACGCTTTTTATGCCCTTGCAGTTAGT 23 4947912 0.989239742 11 20 195 0.875 1.06694679 0.375 0.47826087 0.7 23 3 2 35 2L:4947842-4947930 6 16 551 FBgn0015000 534.58 37.06666667 56.91333333 0.029930039 0.431654676 0.281129202 -6 -7 -6.5 0.15 dme-miR-79-3p 6mer2-7 AGCTTT 2L 4948199 4948204 + 2L_4948199_4948204_+ 0.991095852 0.751916811 0.871506332 0.169125164 betaggt-I FBtr0330714|FBtr0078991 4947866|4947832 4948324|4948324 2L + 4948101 4948323 3'utr betaggt-I FlyBase G1753.1 CGGTATAAATGTTATAATTACTGCAAGGGTATATAAGTTTCGGCTTGCCGATTCTAGCTTACTTTCTGGTTTACATGTATTTTAATGCAAAAAGCTCGAGCTTTTGGAGAGAGAGATGAATAAGTTAGTATGTTTATTGTACAGCCTAAATTAATGTTAACAATGTGTAAGATTAAGCTTAAAAGTAAATTAAAGCGTCCCATGCTGAGGCATGTATTTACAG 64 4948204 0.983853615 27 59 466 0.918918919 1.832508913 0.216216216 0.140625 0.256756757 64 6 0 68 2L:4948101-4948323 6 betaggt-I FBtr0078991|FBtr0330714 4947832|4947866 4948324|4948324 AGCTTT 6mer2-7 dme-miR-79-3p 2L + 4948150 4948232 3'utr betaggt-I FlyBase G1382.1 GATTCTAGCTTACTTTCTGGTTTACATGTATTTTAATGCAAAAAGCTCGAGCTTTTGGAGAGAGAGATGAATAAGTTAGTATG 26 4948205 0.981302468 11 22 188 0.875 1.243038049 0.225 0.346153846 0.575 26 4 1 35 2L:4948150-4948232 6 27.5 552 FBgn0015000 534.58 37.06666667 56.91333333 0.051442254 0.741906475 0.483190816 -5 -6 -5.5 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 2L 4975378 4975384 - 2L_4975378_4975384_- 0.520447311 0.492977114 0.506712213 0.019424365 Gmd FBtr0079049 4975298 4975578 2L - 4975371 4975400 3'utr Gmd FlyBase G7634.1 ACGTTCATGTTCAGTGTGTGATTCTACTTG 8 4975385 0.720897976 4 8 71 1 1.041392685 0.181818182 0.25 0.454545455 8 0 0 11 2L:4975371-4975400 7 Gmd FBtr0079049 4975298 4975578 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 4975358 4975394 3'utr Gmd FlyBase G5933.1 ATGTTCAGTGTGTGATTCTACTTGTTTTTATACAGTA 6 4975386 0.985209722 4 6 49 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 2L:4975358-4975394 7 7 553 FBgn0031661 247.5733333 19.21 29.15 0.028274451 0.364393545 0.240137221 1 2 1.5 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 2L 4992149 4992155 + 2L_4992149_4992155_+ 0.505684285 0.507605411 0.506644848 0.001358423 CG34126 FBtr0329975|FBtr0329977|FBtr0329976|FBtr0329974|FBtr0290010 4991661|4991610|4991597|4991610|4991610 4992702|4992435|4992435|4992702|4992435 2L + 4992115 4992224 3'utr CG34126 FlyBase G1812.1 ACCAATTCCACTAAGATTGGATAGGACATATTGTTGTGATTCATGATCATATCAAAACTGAATTCTAGAAGCTCTATGCATTGCTGTTGTAATCGTGTGCTAACCAAATA 29 4992147 0.986850387 16 26 224 0.911764706 1.491361694 0.147058824 0.172413793 0.294117647 29 3 0 31 2L:4992115-4992224 7 CG34126 FBtr0329974|FBtr0329976|FBtr0329977|FBtr0329975|FBtr0290010 4991610|4991597|4991610|4991661|4991610 4992702|4992435|4992435|4992702|4992435 TGTGATT 7mer-m1 dme-miR-308-3p 2L + 4992111 4992230 3'utr CG34126 FlyBase G1425.1 TAAAACCAATTCCACTAAGATTGGATAGGACATATTGTTGTGATTCATGATCATATCAAAACTGAATTCTAGAAGCTCTATGCATTGCTGTTGTAATCGTGTGCTAACCAAATATTTGGC 36 4992148 0.775562654 19 33 286 0.862745098 1.342422681 0.176470588 0.333333333 0.529411765 36 6 1 44 2L:4992111-4992230 7 14 554 FBgn0083962 1546.97 31.44666667 48.27666667 0.009049949 0.445198219 0.289995167 2 1 1.5 0.15 dme-miR-79-3p 6mer2-7 AGCTTT 2L 4993806 4993811 - 2L_4993806_4993811_- 0.894720071 0.99569342 0.945206745 0.071398905 Rtnl1 FBtr0079039|FBtr0079043|FBtr0079040|FBtr0079038|FBtr0079044|FBtr0079042|FBtr0332413|FBtr0301539|FBtr0301540 4993639|4993639|4993639|4993639|4992806|4993639|4993639|4993639|4992806 4994207|4994207|4994207|4994207|4994207|4994207|4994207|4994207|4994207 2L - 4993773 4993820 3'utr Rtnl1 FlyBase G7654.1 GATTTATTCAGCTTTCTTAGTTTTCATGTGACCCTTTTTAAATTAATT 7 4993813 0.995863691 6 6 81 0.857142857 0.77815125 0.285714286 0 0 7 1 0 6 2L:4993773-4993820 6 Rtnl1 FBtr0301540|FBtr0301539|FBtr0332413|FBtr0079042|FBtr0079044|FBtr0079038|FBtr0079040|FBtr0079043|FBtr0079039 4992806|4993639|4993639|4993639|4992806|4993639|4993639|4993639|4993639 4994207|4994207|4994207|4994207|4994207|4994207|4994207|4994207|4994207 AGCTTT 6mer2-7 dme-miR-79-3p 2L - 4993773 4993822 3'utr Rtnl1 FlyBase G5948.1 TCGATTTATTCAGCTTTCTTAGTTTTCATGTGACCCTTTTTAAATTAATT 10 4993813 0.9938489 7 10 115 1 1.176091259 0.266666667 0.3 0.533333333 10 0 0 15 2L:4993773-4993822 6 6.5 555 FBgn0053113 2720.043333 137.31 210.0133333 0.002389668 0.04733814 0.030950416 2 2 2 0.15 dme-miR-282-5p 6mer2-7 GAGGCT 2L 5010334 5010339 - 2L_5010334_5010339_- 0.998199563 0.998386193 0.998292878 0.000131946 Tfb5 FBtr0301130 5009929 5010486 2L - 5010315 5010362 3'utr Tfb5 FlyBase G7669.1 AGCGGCGTGCCCGCAAAGCCTTGGAGGCTCTGGAGCAGGACAACTACC 6 5010341 0.931640874 2 6 21 1 0.77815125 0.333333333 0 0 6 0 0 6 2L:5010315-5010362 6 Tfb5 FBtr0301130 5009929 5010486 GAGGCT 6mer2-7 dme-miR-282-5p 2L - 5010322 5010362 3'utr Tfb5 FlyBase G5954.1 AGCGGCGTGCCCGCAAAGCCTTGGAGGCTCTGGAGCAGGAC 5 5010341 0.747334656 2 5 14 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 2L:5010322-5010362 6 5 556 FBgn0265968 206.6566667 30.92333333 47.31 0.024194719 0.161690202 0.105685902 2 2 2 0.15 dme-miR-1008-3p 6mer3-8 AGCTGT 2L 5011996 5012001 + 2L_5011996_5012001_+ 0.970992167 0.764557162 0.867774665 0.145971588 CG3887 FBtr0332412|FBtr0079000|FBtr0332411 5011861|5011861|5011861 5012127|5012127|5012127 2L + 5011958 5012034 3'utr CG3887 FlyBase G1817.1 AACTTAAACATAAGCTCTTGTCCCGACATTATCCACTTAGCTGTATTTCTGTTTTCACCCCAACTATAGCCTACTCT 16 5012004 0.991313207 7 14 145 0.9 1.255272505 0.05 0.1875 0.35 16 2 0 18 2L:5011958-5012034 6 CG3887 FBtr0332411|FBtr0332412|FBtr0079000 5011861|5011861|5011861 5012127|5012127|5012127 AGCTGT 6mer3-8 dme-miR-1008-3p 2L + 5011960 5012021 3'utr CG3887 FlyBase G1427.1 CTTAAACATAAGCTCTTGTCCCGACATTATCCACTTAGCTGTATTTCTGTTTTCACCCCAAC 6 5012004 0.98220162 4 5 42 1 0.903089987 0.25 0.333333333 0.5 6 0 0 8 2L:5011960-5012021 6 6.5 557 FBgn0031670 479.6666667 65.39 99.91 0.013551077 0.099403579 0.065058553 -8 -8 -8 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 2L 5047718 5047724 + 2L_5047718_5047724_+ 0.608041739 0.614066303 0.611054021 0.004260036 CG44000 FBtr0334121|FBtr0334123|FBtr0334120|FBtr0334119|FBtr0334122 5046974|5046974|5046974|5046974|5046974 5048365|5048365|5048365|5048365|5048365 2L + 5047682 5047744 3'utr CG44000 FlyBase G1844.1 AACACTTAAGCTGGTCAAGGATAAAAAGGACAAAATTGCATTTGAGTACATCATGGAGAACGC 75 5047717 0.915481584 4 69 384 0.917525773 1.648360011 0.288659794 0.173333333 0.360824742 75 7 1 89 2L:5047682-5047744 7 CG44000 FBtr0334121|FBtr0334122|FBtr0334119|FBtr0334120|FBtr0334123 5046974|5046974|5046974|5046974|5046974 5048365|5048365|5048365|5048365|5048365 TGCATTT 7mer-m8 dme-miR-277-3p 2L + 5047686 5047744 3'utr CG44000 FlyBase G1463.1 CTTAAGCTGGTCAAGGATAAAAAGGACAAAATTGCATTTGAGTACATCATGGAGAACGC 54 5047717 0.962872234 5 54 275 1 1.913813852 0.243902439 0.351851852 0.573170732 54 0 0 82 2L:5047686-5047744 7 61 558 FBgn0264742 443.39 23.51666667 36.15 0.1375764 2.593905032 1.687413555 1 1 1 0.15 dme-miR-1008-3p 6mer3-8 AGCTGT 2L 5055818 5055823 + 2L_5055818_5055823_+ 0.979678821 0.921823138 0.950750979 0.040910158 His3.3A FBtr0079010|FBtr0333537|FBtr0333536 5055758|5055758|5055758 5055995|5055995|5056149 2L + 5055761 5055851 3'utr His3.3A FlyBase G1858.1 TGCCCATGACCGCCATCTTGGATTGGAAAAGCAGTGGCGGCAAAACTACCAACCCACAGCTGTCGCTTGGAGGGGGGAACTCGGAGCTAGA 34 5055827 0.704302051 9 33 119 0.975 1.591064607 0.325 0.176470588 0.3 34 1 0 39 2L:5055761-5055851 6 His3.3A FBtr0333536|FBtr0333537|FBtr0079010 5055758|5055758|5055758 5056149|5055995|5055995 AGCTGT 6mer3-8 dme-miR-1008-3p 2L + 5055767 5055848 3'utr His3.3A FlyBase G1477.1 TGACCGCCATCTTGGATTGGAAAAGCAGTGGCGGCAAAACTACCAACCCACAGCTGTCGCTTGGAGGGGGGAACTCGGAGCT 21 5055828 0.898869015 7 20 75 0.931034483 1.431363764 0.482758621 0.285714286 0.482758621 21 2 0 27 2L:5055767-5055848 6 17.5 559 FBgn0014857 1249.59 205.6366667 313.4066667 0.014004594 0.085101555 0.055837995 -9 -10 -9.5 0.15 dme-miR-92b-3p 8mer-m1 GTGCAATT 2L 5072544 5072551 - 2L_5072544_5072551_- 0.59668101 0.594519895 0.595600453 0.001528128 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 2L - 5072517 5072647 3'utr pgant5 FlyBase G7737.1 ATTTTTAAAATCGATTATGTGTGACGAACCCATAGTTATAGAGAAACGACGATATATACACATACGGCAAAATAGCAACTATTTTAACTGGTGACGGTGCAATTTTTAATTAACATTTAAAATGAAACAGG 19 5072575 0.97653 11 18 121 0.947368421 1.255272505 0.105263158 0 0 19 1 0 18 2L:5072517-5072647 8 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 GTGCAATT 8mer-m1 dme-miR-92b-3p 2L - 5072534 5072605 3'utr pgant5 FlyBase G6028.1 GAAACGACGATATATACACATACGGCAAAATAGCAACTATTTTAACTGGTGACGGTGCAATTTTTAATTAAC 11 5072545 0.979459481 7 9 64 0.833333333 1.176091259 0.166666667 0.454545455 0.666666667 11 3 0 15 2L:5072534-5072605 8 4.5 560 FBgn0031681 2245.746667 62.23 95.52 0.002003788 0.07231239 0.047110553 24 -6 9 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA 2L 5072906 5072913 - 2L_5072906_5072913_- 0.625251402 0.625364137 0.625307769 7.97E-05 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 2L - 5072884 5073118 3'utr pgant5 FlyBase G7740.1 AAAGAAAAAAAAATCTCTCAAAATTGCACGCATATCATAAATACAGTGTAAAAATATATATATAAGCTACATTCAAACGAGAACTAAACAAAAACAATGTAAATATGATTAATGTAGCTATTAAAAATATACATTTAAATAAAATATCTATGTAGTACCTATATGATATACACATATGCAAAGCAAGCAAAACTGTACTATAAATTGCATTTAGTTCTAGGCTTAACGTTAAGTT 55 5072914 0.988669298 20 47 441 0.867647059 1.770852012 0.058823529 0.218181818 0.367647059 55 9 0 59 2L:5072884-5073118 8 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 TGCATTTA 8mer-A1 dme-miR-277-3p 2L - 5072888 5072978 3'utr pgant5 FlyBase G6029.1 AAAATATCTATGTAGTACCTATATGATATACACATATGCAAAGCAAGCAAAACTGTACTATAAATTGCATTTAGTTCTAGGCTTAACGTTA 22 5072914 0.930655179 7 22 178 1 1.531478917 0 0.409090909 0.617647059 22 0 0 34 2L:5072888-5072978 8 22.5 561 FBgn0031681 2245.746667 62.23 95.52 0.01001894 0.361561948 0.235552764 1 1 1 0.15 dme-miR-252-5p 6mer3-8 GTACTT 2L 5073313 5073318 - 2L_5073313_5073318_- 0.999986323 0.999983004 0.999984663 2.33E-06 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 2L - 5073267 5073338 3'utr pgant5 FlyBase G7742.2 TGACATTCCTAGCTAGAATTGTACTTGAGAAAATTTACGTTTGTTTTGTTTTAATTTTACCTTAAGTCACTT 18 5073304 0.797940764 5 15 140 0.952380952 1 0.142857143 0.111111111 0.238095238 18 0 1 20 2L:5073267-5073338 6 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 GTACTT 6mer3-8 dme-miR-252-5p 2L - 5073291 5073329 3'utr pgant5 FlyBase G6030.1 TAGCTAGAATTGTACTTGAGAAAATTTACGTTTGTTTTG 9 5073304 0.693871085 4 7 70 0.894736842 1.230448921 0.578947368 0.666666667 0.842105263 9 2 0 17 2L:5073291-5073329 6 7 562 FBgn0031681 2245.746667 62.23 95.52 0.003117003 0.112485939 0.073283082 -14 -14 -14 0.15 dme-miR-277-3p 7mer-A1 GCATTTA 2L 5073486 5073492 - 2L_5073486_5073492_- 0.82334665 0.823235705 0.823291177 7.84E-05 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 2L - 5073470 5073514 3'utr pgant5 FlyBase G7744.2 TCGACCAAGTACCAATAAATTGGCATTTAACTGACGTTTTGTGCT 38 5073494 0.766249955 6 36 262 0.934782609 1.633468456 0.152173913 0.210526316 0.347826087 38 3 0 43 2L:5073470-5073514 7 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 GCATTTA 7mer-A1 dme-miR-277-3p 2L - 5073470 5073518 3'utr pgant5 FlyBase G6031.1 AGCTTCGACCAAGTACCAATAAATTGGCATTTAACTGACGTTTTGTGCT 30 5073494 0.809947269 4 29 212 1 1.653212514 0 0.266666667 0.511111111 30 0 0 45 2L:5073470-5073518 7 30 563 FBgn0031681 2245.746667 62.23 95.52 0.013358586 0.482082597 0.314070352 2 2 2 0.15 dme-miR-7-5p 7mer-m8 GTCTTCC 2L 5073648 5073654 - 2L_5073648_5073654_- 0.663520234 0.522738179 0.593129207 0.099547907 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 2L - 5073602 5073846 3'utr pgant5 FlyBase G7746.1 TAAATACAACTCAACTCAACGGATCCTACTAACTATACTGAGAACTTCCAATTTATGTTTAATCCTAGCCGGCTCCTGTTTTCGACGTTTATGTAGCCTAAGTTCAAGCGGATTCAATATCCCTCTCTCTCTCTCTATCTTTGTGTGCGTGAATGTGTGTAGGCGGCCGGAGGAGTCCTTCGGCAGCAGGATGTCTTCCCAAAATCTTGATGCGCGTGTGTGAATGTATAGATCTGTTTACATGA 125 5073655 0.906079959 33 118 741 0.944827586 2.136720567 0.172413793 0.136 0.255172414 125 8 0 137 2L:5073602-5073846 7 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 GTCTTCC 7mer-m8 dme-miR-7-5p 2L - 5073579 5073686 3'utr pgant5 FlyBase G6032.1 AGGCGGCCGGAGGAGTCCTTCGGCAGCAGGATGTCTTCCCAAAATCTTGATGCGCGTGTGTGAATGTATAGATCTGTTTACATGATGTGCATGTATATGTGTTTATAT 44 5073655 0.893766348 13 42 264 0.961538462 1.875061263 0.243589744 0.590909091 0.769230769 44 3 0 75 2L:5073579-5073686 7 46 564 FBgn0031681 2245.746667 62.23 95.52 0.020483165 0.739193315 0.481574539 1 1 1 0.15 dme-miR-79-3p 6mer3-8 TAGCTT 2L 5099541 5099546 - 2L_5099541_5099546_- 0.989341003 0.994285433 0.991813218 0.003496219 CG8680 FBtr0345334|FBtr0345333|FBtr0079025 5099498|5099175|5099498 5099601|5099601|5099601 2L - 5099507 5099564 3'utr CG8680 FlyBase G7764.1 CTTTCTATCCTGTTGCGCTAGCTTGAACTAAACTAAACTAAATAAAATTAGAACACCA 7 5099541 0.987667761 5 7 53 1 0.903089987 0 0.142857143 0.25 7 0 0 8 2L:5099507-5099564 6 CG8680 FBtr0345333|FBtr0079025|FBtr0345334 5099175|5099498|5099498 5099601|5099601|5099601 TAGCTT 6mer3-8 dme-miR-79-3p 2L - 5099499 5099575 3'utr CG8680 FlyBase G6044.1 AGCTAAAACACCTTTCTATCCTGTTGCGCTAGCTTGAACTAAACTAAACTAAATAAAATTAGAACACCAAAAAGCTA 7 5099562 0.984748284 6 7 52 1 1.079181246 0 0.571428571 0.75 7 0 0 12 2L:5099499-5099575 6 5 565 FBgn0031684 213 43.71 66.32666667 0.023474178 0.1143903 0.075384461 -5 16 5.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 2L 5186355 5186361 + 2L_5186355_5186361_+ 0.81286362 0.823327629 0.818095625 0.007399165 Msp300 FBtr0303384 5186161 5186528 2L + 5186320 5186376 3'utr Msp300 FlyBase G1951.1 AAACGCATCCAATAGGCTTATGTTTTGAGTTTGTATACCTGAACGAAAAAGTTACTA 17 5186353 0.979338163 8 16 113 0.958333333 1.361727836 0.083333333 0.235294118 0.458333333 17 1 0 23 2L:5186320-5186376 7 Msp300 FBtr0303384 5186161 5186528 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2L + 5186323 5186370 3'utr Msp300 FlyBase G1537.1 CGCATCCAATAGGCTTATGTTTTGAGTTTGTATACCTGAACGAAAAAG 8 5186353 0.974249724 5 8 50 1 1.113943352 0.153846154 0.5 0.692307692 8 0 0 13 2L:5186323-5186370 7 9.5 566 FBgn0261836 15716.32333 95.7 146.9 0.000604467 0.099268548 0.064669843 2 2 2 0.15 dme-miR-980-5p 7mer-m1 AAAAACT 2L 5205844 5205850 + 2L_5205844_5205850_+ 0.765571099 0.765586635 0.765578867 1.10E-05 Msp300 FBtr0303388|FBtr0303385|FBtr0303387|FBtr0332405 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 2L + 5205828 5205871 3'utr Msp300 FlyBase G2009.1 ACGTATATGATCCCAAAAAAACTATAGAGAACCCAAACATTTTG 8 5205834 0.933032584 5 7 25 0.9 0.954242509 0.1 0.125 0.3 8 1 0 9 2L:5205828-5205871 7 Msp300 FBtr0332405|FBtr0303385|FBtr0303387|FBtr0303388 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 AAAAACT 7mer-m1 dme-miR-980-5p 2L + 5205797 5205851 3'utr Msp300 FlyBase G1587.1 CAGCAAACAATTTATATATTCATATATACCCACGTATATGATCCCAAAAAAACTA 8 5205835 0.975254642 7 7 50 0.923076923 1.079181246 0 0.5 0.692307692 8 1 0 12 2L:5205797-5205851 7 6 567 FBgn0261836 15716.32333 95.7 146.9 0.000381769 0.062695925 0.040844112 10 9 9.5 0.15 dme-bantam-3p 8mer-A1 TGATCTCA 2L 5206021 5206028 + 2L_5206021_5206028_+ 0.630548794 0.630938618 0.630743706 0.00027563 Msp300 FBtr0303388|FBtr0303385|FBtr0303387|FBtr0332405 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 2L + 5206011 5206052 3'utr Msp300 FlyBase G2011.1 TCGCAGGATATGATCTCAAGTTCCTGCTGCCAGCGATGGGCT 9 5206020 0.96282156 5 9 49 1 1.113943352 0.153846154 0.333333333 0.538461538 9 0 0 13 2L:5206011-5206052 8 Msp300 FBtr0332405|FBtr0303385|FBtr0303387|FBtr0303388 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 TGATCTCA 8mer-A1 dme-bantam-3p 2L + 5205999 5206056 3'utr Msp300 FlyBase G1589.1 CGTGGAACATTTTCGCAGGATATGATCTCAAGTTCCTGCTGCCAGCGATGGGCTAGAA 13 5206019 0.84509398 8 13 77 1 1.146128036 0.5 0.076923077 0.142857143 13 0 0 14 2L:5205999-5206056 8 10.5 568 FBgn0261836 15716.32333 95.7 146.9 0.000668095 0.109717868 0.071477195 1 2 1.5 0.15 dme-miR-12-5p 7mer-A1 ATACTCA 2L 5206385 5206391 + 2L_5206385_5206391_+ 0.8232067 0.823349555 0.823278128 0.000101046 Msp300 FBtr0303388|FBtr0303385|FBtr0303387|FBtr0332405 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 2L + 5206368 5206419 3'utr Msp300 FlyBase G2016.1 CATTTCAAGCATTCCTGATACTCATTTCCAAATTACCAATAGACATTGACCA 48 5206382 0.981900934 5 46 343 0.983870968 1.785329835 0 0.229166667 0.403225806 48 1 0 61 2L:5206368-5206419 7 Msp300 FBtr0332405|FBtr0303385|FBtr0303387|FBtr0303388 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 ATACTCA 7mer-A1 dme-miR-12-5p 2L + 5206369 5206432 3'utr Msp300 FlyBase G1594.1 ATTTCAAGCATTCCTGATACTCATTTCCAAATTACCAATAGACATTGACCATCGAAGCCAGCTC 37 5206382 0.987366102 7 29 263 0.804347826 0.966141733 0.065217391 0.189189189 0.347826087 37 6 3 37 2L:5206369-5206432 7 40.5 569 FBgn0261836 15716.32333 95.7 146.9 0.002576939 0.423197492 0.275697754 3 3 3 0.15 "dme-miR-995-3p,dme-miR-998-3p" 7mer-A1 GGTGCTA 2L 5206502 5206508 + 2L_5206502_5206508_+ 0.816749994 0.799265894 0.808007944 0.012363126 Msp300 FBtr0303388|FBtr0303385|FBtr0303387|FBtr0332405 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 2L + 5206482 5206526 3'utr Msp300 FlyBase G2018.1 CGAAGCAAGTGTCCTATGCCGGTGCTAAACCAACCTACAAATTTT 12 5206498 0.75712565 3 12 64 1 1.146128036 0 0.166666667 0.285714286 12 0 0 14 2L:5206482-5206526 7 Msp300 FBtr0332405|FBtr0303385|FBtr0303387|FBtr0303388 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 GGTGCTA 7mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 2L + 5206478 5206513 3'utr Msp300 FlyBase G1595.1 AAAACGAAGCAAGTGTCCTATGCCGGTGCTAAACCA 7 5206498 0.948153779 2 7 32 1 1.041392685 0.181818182 0.428571429 0.636363636 7 0 0 11 2L:5206478-5206513 7 9 570 FBgn0261836 15716.32333 95.7 146.9 0.000572653 0.094043887 0.061266167 4 4 4 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 5206966 5206971 + 2L_5206966_5206971_+ 0.998515018 0.998542113 0.998528565 1.92E-05 Msp300 FBtr0303388|FBtr0303385|FBtr0303387|FBtr0332405 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 2L + 5206929 5206996 3'utr Msp300 FlyBase G2019.3 ATGTAGCATTTTAAGATTTCCTTTCTTGTGAACAACTGTACCTTTATATGCATTATGATTATTAAAAA 755 5206965 0.851126469 20 736 5897 0.982824427 2.167739185 0.055343511 0.274172185 0.477099237 755 12 6 1030 2L:5206929-5206996 6 Msp300 FBtr0332405|FBtr0303385|FBtr0303387|FBtr0303388 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 5206929 5206996 3'utr Msp300 FlyBase G1599.2 ATGTAGCATTTTAAGATTTCCTTTCTTGTGAACAACTGTACCTTTATATGCATTATGATTATTAAAAA 587 5206965 0.849661248 17 574 4508 0.982121573 2.915927212 0.063170441 0.313458262 0.519666269 587 15 0 824 2L:5206929-5206996 6 599 571 FBgn0261836 15716.32333 95.7 146.9 0.03811324 6.259143156 4.077603812 1 1 1 0.15 dme-miR-92b-3p 6mer3-8 GTGCAA 2L 5219535 5219540 - 2L_5219535_5219540_- 0.99999991 0.999999997 0.999999953 7.07E-08 tkv FBtr0079088|FBtr0079086|FBtr0079087|FBtr0079089 5218998|5218998|5218998|5218998 5220092|5220092|5220092|5220092 2L - 5219488 5219601 3'utr tkv FlyBase G7773.1 AGAACATGTCCTTATATGTTTTGTTTGTATCTAGTGTTTAAGTGTAAACTTTGCAGACTTTGTGCAAGTAAATGCTGCCTTTTGTAAAATCCACGGAATTAGTTGCCTTAAGAC 42 5219521 0.987873475 14 37 330 0.894736842 1.008600172 0.298245614 0.285714286 0.473684211 42 2 4 51 2L:5219488-5219601 6 tkv FBtr0079087|FBtr0079089|FBtr0079088|FBtr0079086 5218998|5218998|5218998|5218998 5220092|5220092|5220092|5220092 GTGCAA 6mer3-8 dme-miR-92b-3p 2L - 5219509 5219573 3'utr tkv FlyBase G6049.1 ATCTAGTGTTTAAGTGTAAACTTTGCAGACTTTGTGCAAGTAAATGCTGCCTTTTGTAAAATCCA 19 5219522 0.686550624 8 18 164 0.92 1.361727836 0.32 0.263157895 0.44 19 2 0 23 2L:5219509-5219573 6 24.5 572 FBgn0003716 310.6566667 12.88 19.87333333 0.0788652 1.902173913 1.232807783 -19 -18 -18.5 0.15 dme-miR-965-3p 7mer-m8 TACGCTT 2L 5219658 5219664 - 2L_5219658_5219664_- 0.620182013 0.620204576 0.620193295 1.60E-05 tkv FBtr0079088|FBtr0079086|FBtr0079087|FBtr0079089 5218998|5218998|5218998|5218998 5220092|5220092|5220092|5220092 2L - 5219651 5219678 3'utr tkv FlyBase G7774.1 TGTGCCAGCTTTTGTACGCTTTAACTAA 11 5219665 0.663212313 5 10 91 0.909090909 1 0.272727273 0 0 11 1 0 10 2L:5219651-5219678 7 tkv FBtr0079087|FBtr0079089|FBtr0079088|FBtr0079086 5218998|5218998|5218998|5218998 5220092|5220092|5220092|5220092 TACGCTT 7mer-m8 dme-miR-965-3p 2L - 5219651 5219676 3'utr tkv FlyBase G6050.1 TGCCAGCTTTTGTACGCTTTAACTAA 5 5219664 0.629195756 4 5 37 1 0.903089987 0 0.6 0.75 5 0 0 8 2L:5219651-5219676 7 7.5 573 FBgn0003716 310.6566667 12.88 19.87333333 0.024142408 0.582298137 0.377390138 1 0 0.5 0.15 dme-miR-283-5p 7mer-m8 TGATATT 2L 5272044 5272050 - 2L_5272044_5272050_- 0.531045703 0.478311358 0.504678531 0.037288781 Bsg25D FBtr0079085|FBtr0310625|FBtr0310624|FBtr0302568|FBtr0079084 5271726|5271726|5271726|5271726|5271726 5272677|5272677|5272677|5272677|5272677 2L - 5272032 5272091 3'utr Bsg25D FlyBase G7786.2 TATTGATAGAGAAAATGGAAATGAGCGTAAAAAATGATCTATGATATTGATATTGATGTA 69 5272076 0.940221704 8 66 327 0.951807229 1.897627091 0.493975904 0.144927536 0.289156627 69 4 0 79 2L:5272032-5272091 7 Bsg25D FBtr0302568|FBtr0079084|FBtr0310624|FBtr0310625|FBtr0079085 5271726|5271726|5271726|5271726|5271726 5272677|5272677|5272677|5272677|5272677 TGATATT 7mer-m8 dme-miR-283-5p 2L - 5272030 5272100 3'utr Bsg25D FlyBase G6059.1 TGTTAATTTTATTGATAGAGAAAATGGAAATGAGCGTAAAAAATGATCTATGATATTGATATTGATGTAAT 66 5272056 0.959924864 7 64 340 0.989583333 1.977723605 0.416666667 0.363636364 0.5625 66 1 0 95 2L:5272030-5272100 7 40.5 574 FBgn0000228 499.75 17.04333333 26.20333333 0.08104052 2.376295717 1.545604885 26 6 16 0.15 dme-bantam-3p 6mer2-7 GATCTC 2L 5310099 5310104 + 2L_5310099_5310104_+ 0.999999869 1 0.999999935 7.07E-08 vri FBtr0079071|FBtr0342936|FBtr0079070|FBtr0346579|FBtr0300020 5309719|5309719|5309719|5309719|5309719 5310996|5310996|5310625|5311223|5310610 2L + 5310045 5310223 3'utr vri FlyBase G2053.1 ATGTTTATCTATCCACTGTATTGAGTCTTGTAATCGTGAATGTTTAACTATATAGATCTCGTCAACTCGGAGCTAAAAAAAAATCCTTAGGGTCAGCCCAAAAGAATTTCTAATTTAACCTGTTTGTTGTATACACACAAGCTATTTGTTTGCATAGCTAGCTGGTGACCTGCGATGAG 122 5310096 0.927326496 32 104 917 0.854304636 1.156347201 0.178807947 0.18852459 0.344370861 122 14 8 129 2L:5310045-5310223 6 vri FBtr0346579|FBtr0300020|FBtr0342936|FBtr0079070|FBtr0079071 5309719|5309719|5309719|5309719|5309719 5311223|5310610|5310996|5310625|5310996 GATCTC 6mer2-7 dme-bantam-3p 2L + 5310036 5310186 3'utr vri FlyBase G1632.1 TCTGTGTGTATGTTTATCTATCCACTGTATTGAGTCTTGTAATCGTGAATGTTTAACTATATAGATCTCGTCAACTCGGAGCTAAAAAAAAATCCTTAGGGTCAGCCCAAAAGAATTTCTAATTTAACCTGTTTGTTGTATACACACAAGC 73 5310106 0.987533168 21 68 605 0.946902655 2.029383778 0.061946903 0.369863014 0.592920354 73 6 0 107 2L:5310036-5310186 6 59.5 575 FBgn0016076 178.9966667 5.846666667 8.973333333 0.332408425 10.17673888 6.630757801 3 -7 -2 0.15 dme-miR-970-3p 7mer-m8 TCTTATG 2L 5310253 5310259 + 2L_5310253_5310259_+ 0.542719822 0.656298565 0.599509193 0.08031234 vri FBtr0079071|FBtr0342936|FBtr0079070|FBtr0346579|FBtr0300020 5309719|5309719|5309719|5309719|5309719 5310996|5310996|5310625|5311223|5310610 2L + 5310224 5310359 3'utr vri FlyBase G2054.1 CATCGGGGTCACCAGCCACGTTATTGTTCTCTTATGCATCCCAAGTTTCCTTATGCACAGCGAAAGTGGAGAAGATAAAGAATTATTATGTTTGTAAGCAAACGTTACAAAGTATTTGCTGTTGTACATATTACAC 63 5310247 0.837967263 19 60 538 0.961038961 1.86923172 0.233766234 0.158730159 0.311688312 63 3 0 74 2L:5310224-5310359 7 vri FBtr0346579|FBtr0300020|FBtr0342936|FBtr0079070|FBtr0079071 5309719|5309719|5309719|5309719|5309719 5311223|5310610|5310996|5310625|5310996 TCTTATG 7mer-m8 dme-miR-970-3p 2L + 5310191 5310286 3'utr vri FlyBase G1633.1 TGTTTGCATAGCTAGCTGGTGACCTGCGATGAGCATCGGGGTCACCAGCCACGTTATTGTTCTCTTATGCATCCCAAGTTTCCTTATGCACAGCGA 28 5310256 0.895660876 10 26 219 0.947368421 1.556302501 0.289473684 0.214285714 0.421052632 28 2 0 36 2L:5310191-5310286 7 21 576 FBgn0016076 178.9966667 5.846666667 8.973333333 0.11732062 3.591790194 2.340267459 6 -3 1.5 0.15 dme-miR-2535b-3p 7mer-A1 CGTGAGA 2L 5310551 5310557 + 2L_5310551_5310557_+ 0.582140663 0.759538684 0.670839673 0.125439329 vri FBtr0079071|FBtr0342936|FBtr0079070|FBtr0346579|FBtr0300020 5309719|5309719|5309719|5309719|5309719 5310996|5310996|5310625|5311223|5310610 2L + 5310503 5310589 3'utr vri FlyBase G2057.1 AACAAACATATACATTACACTTAAGAAACGCGTGAAGCACATTCAAAACGTGAGAGATGAAAGAAATCTGAAAAGAATTGATGAATA 190 5310560 0.855065786 12 144 678 0.763285024 1.084713735 0.236714976 0.08994709 0.169082126 189 37 12 158 2L:5310503-5310589 7 vri FBtr0346579|FBtr0300020|FBtr0342936|FBtr0079070|FBtr0079071 5309719|5309719|5309719|5309719|5309719 5311223|5310610|5310996|5310625|5310996 CGTGAGA 7mer-A1 dme-miR-2535b-3p 2L + 5310506 5310586 3'utr vri FlyBase G1636.1 AAACATATACATTACACTTAAGAAACGCGTGAAGCACATTCAAAACGTGAGAGATGAAAGAAATCTGAAAAGAATTGATGA 105 5310560 0.805005433 10 81 358 0.773584906 1.390935107 0.352201258 0.380952381 0.591194969 105 32 4 123 2L:5310506-5310586 7 131.5 577 FBgn0016076 178.9966667 5.846666667 8.973333333 0.734650552 22.49144812 14.65453195 -9 -9 -9 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2L 5316842 5316848 - 2L_5316842_5316848_- 0.823312145 0.823289813 0.823300979 1.58E-05 Ncoa6 FBtr0329969|FBtr0307041|FBtr0307040 5315424|5315288|5316236 5317209|5317812|5317812 2L - 5316764 5316874 3'utr Ncoa6 FlyBase G7816.1 AAAATCCACCCATTGGAAATGATTTGCTAGTCATGTGAAACAGGCAATTTAATGTATAGCTCAGAAGATGAAATTTGAACAAATTAGTTGAGTAACGTATTTGAGAAGCTC 165 5316851 0.985201458 14 156 1263 0.936585366 1.806179974 0.224390244 0.206060606 0.36097561 165 11 2 192 2L:5316764-5316874 7 Ncoa6 FBtr0307040|FBtr0307041|FBtr0329969 5316236|5315288|5315424 5317812|5317812|5317209 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 5316829 5316886 3'utr Ncoa6 FlyBase G6078.2 TTACTCCCCAAAAAAATCCACCCATTGGAAATGATTTGCTAGTCATGTGAAACAGGCA 124 5316851 0.655334878 10 119 918 0.975247525 2.294466226 0.267326733 0.451612903 0.663366337 124 5 0 197 2L:5316829-5316886 7 134 578 FBgn0031698 1745.396667 21.13666667 32.68333333 0.076773379 6.339694055 4.099949006 3 3 3 0.15 dme-miR-305-3p 6mer2-7 TGTGCC 2L 5317440 5317445 - 2L_5317440_5317445_- 0.930835174 0.929956674 0.930395924 0.000621193 Ncoa6 FBtr0307041|FBtr0307040 5315288|5316236 5317812|5317812 2L - 5317421 5317460 3'utr Ncoa6 FlyBase G7819.1 ACGATGAGTTCAATCTGTGCCTGAACAACATCCTCAGCGA 45 5317445 0.756474061 2 44 259 0.980769231 1.707570176 0.423076923 0.111111111 0.230769231 45 1 0 51 2L:5317421-5317460 6 Ncoa6 FBtr0307040|FBtr0307041 5316236|5315288 5317812|5317812 TGTGCC 6mer2-7 dme-miR-305-3p 2L - 5317421 5317544 3'utr Ncoa6 FlyBase G6080.1 GTGCCGCGGATGTTGAGGTGGATGAGGTGCTGATGCCGGAGCTGGACAATGCCACGGCCTTGGACTGCGCCAGCTTTGTCGACTACGATGAGTTCAATCTGTGCCTGAACAACATCCTCAGCGA 29 5317445 0.964938233 10 29 158 1 1.633468456 0.372093023 0.379310345 0.581395349 29 0 0 43 2L:5317421-5317544 6 31.5 579 FBgn0031698 1745.396667 21.13666667 32.68333333 0.018047473 1.490301214 0.963793983 0 0 0 0.15 dme-miR-33-5p 6mer2-7 AATGCA 2L 540306 540311 + 2L_540306_540311_+ 0.85406631 0.518982758 0.686524534 0.236939815 ush FBtr0333012|FBtr0329895|FBtr0078063|FBtr0310027|FBtr0333013 539955|540018|539955|539955|539955 540532|540560|540560|540532|540532 2L + 540219 540355 3'utr ush FlyBase G853.1 ATATACAGTACACCTAAAGGAATAACACATAGATACTTAGGTACATTAATTTAGGCGCATACCCATTAAGTGGGAACCATGACATATAATGCATGCCAAAGCTTACCACTTAGACAGAAATTAAATTGAGGGCGAGA 156 540312 0.966895551 12 145 782 0.943502825 1.523746467 0.107344633 0.128205128 0.231638418 156 6 4 167 2L:540219-540355 6 ush FBtr0310027|FBtr0333013|FBtr0329895|FBtr0078063|FBtr0333012 539955|539955|540018|539955|539955 540532|540532|540560|540560|540532 AATGCA 6mer2-7 dme-miR-33-5p 2L + 540261 540523 3'utr ush FlyBase G683.1 ACATTAATTTAGGCGCATACCCATTAAGTGGGAACCATGACATATAATGCATGCCAAAGCTTACCACTTAGACAGAAATTAAATTGAGGGCGAGAAACTACAAGTTTGCAATGGTCTGCGGAGTAGAAGGAGGCGAAGTATTCCAATGTAGATCCAATACTATAATGTAAATTACTCGCTGTTCCCCATAAAGCGAGCAATTCTAACTGTGTAATTTAAATGAGTACATTATTTATTAAGTGTGTGCGACAATAAAAGTAATT 151 540312 0.964665094 28 146 765 0.978070175 2.348304863 0.105263158 0.373333333 0.587719298 150 5 0 223 2L:540261-540523 6 117 580 FBgn0003963 1303.193333 29.53666667 45.16666667 0.089779465 3.961178197 2.590405904 -6 -6 -6 0.15 dme-bantam-3p 6mer2-7 GATCTC 2L 5539717 5539722 - 2L_5539717_5539722_- 0.999928933 0.989409526 0.994669229 0.007438339 Hel25E FBtr0331676 5539492 5540779 2L - 5539709 5539827 5'utr Hel25E FlyBase G7886.1 AAGGGACTGGCAATCACATTCGTTTCGGACGAGAACGACGCCAAGATACTTAACGAAGTACAGGATCGTTTCGATGTGAACATCAGTGAGCTGCCCGAGGAAATCGATCTCTCTACATA 49 5539715 0.958529738 10 45 220 0.923076923 1.681241237 0.442307692 0.06122449 0.115384615 49 4 0 48 2L:5539709-5539827 6 Hel25E FBtr0331676 5539492 5540779 GATCTC 6mer2-7 dme-bantam-3p 2L - 5539707 5539792 5'utr Hel25E FlyBase G6125.1 CGACGCCAAGATACTTAACGAAGTACAGGATCGTTTCGATGTGAACATCAGTGAGCTGCCCGAGGAAATCGATCTCTCTACATACA 38 5539715 0.954799446 10 34 156 0.944444444 1.40654018 0.481481481 0.289473684 0.5 38 2 1 51 2L:5539707-5539792 6 28 581 FBgn0014189 1923.333333 131.82 201.5566667 0.014558059 0.212410863 0.138918749 -7 -7 -7 0.15 dme-miR-2a-2-5p 7mer-m1 GATGAGG 2L 5540273 5540279 - 2L_5540273_5540279_- 0.787250006 0.788280425 0.787765215 0.000728603 Hel25E FBtr0331676 5539492 5540779 2L - 5540250 5540294 5'utr Hel25E FlyBase G7890.1 GAGGTCTACGTCGACGATGAGGCCAAGCTGACGCTGCACGGACTG 47 5540277 0.983732888 3 45 133 0.963636364 1.72427587 0.145454545 0.127659574 0.254545455 47 2 0 53 2L:5540250-5540294 7 Hel25E FBtr0331676 5539492 5540779 GATGAGG 7mer-m1 dme-miR-2a-2-5p 2L - 5540251 5540294 5'utr Hel25E FlyBase G6129.2 GAGGTCTACGTCGACGATGAGGCCAAGCTGACGCTGCACGGACT 32 5540277 0.974804876 4 29 69 1 1.672097858 0.042553191 0.375 0.574468085 32 0 0 47 2L:5540251-5540294 7 36 582 FBgn0014189 1923.333333 131.82 201.5566667 0.018717504 0.273099681 0.17860982 -2 -2 -2 0.15 dme-miR-304-5p 6mer2-7 GAGATT 2L 5545619 5545624 + 2L_5545619_5545624_+ 0.999993644 0.999853109 0.999923377 9.93E-05 Lam FBtr0307058|FBtr0079100|FBtr0307059|FBtr0346460 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 2L + 5545565 5545631 3'utr Lam FlyBase G2114.1 AAGCACACACGAAGATCATAATTTAGAACCCAAAAACACACACACCGAGGTACAGAGATTTATTATT 14 5545628 0.965716974 6 13 66 0.882352941 1.176091259 0.058823529 0.214285714 0.352941176 14 2 0 15 2L:5545565-5545631 6 Lam FBtr0307059|FBtr0346460|FBtr0307058|FBtr0079100 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 GAGATT 6mer2-7 dme-miR-304-5p 2L + 5545601 5545635 3'utr Lam FlyBase G1680.2 CACACACACCGAGGTACAGAGATTTATTATTCAGC 8 5545627 0.968723613 4 7 43 0.916666667 1.041392685 0 0.375 0.583333333 8 1 0 11 2L:5545601-5545635 6 9 583 FBgn0002525 6943.616667 266.97 409.4166667 0.001296155 0.033711653 0.021982495 -9 -8 -8.5 0.15 dme-miR-252-5p 7mer-m8 GTACTTA 2L 5545939 5545945 + 2L_5545939_5545945_+ 0.531660538 0.573104115 0.552382326 0.029305051 Lam FBtr0307058|FBtr0079100|FBtr0307059|FBtr0346460 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 2L + 5545924 5546007 3'utr Lam FlyBase G2118.1 AACAATATTTTCGATGTACTTACGCTCCACCTACATATTTAGTAAATTAGTTTTTAAGCTATATCCCAGATAAACCAGTCGACG 11 5545938 0.985453426 6 10 91 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 2L:5545924-5546007 7 Lam FBtr0307059|FBtr0346460|FBtr0307058|FBtr0079100 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 GTACTTA 7mer-m8 dme-miR-252-5p 2L + 5545927 5545958 3'utr Lam FlyBase G1684.1 AATATTTTCGATGTACTTACGCTCCACCTACA 5 5545940 0.966843465 2 4 29 1 0.84509804 0 0.2 0.428571429 5 0 0 7 2L:5545927-5545958 7 6 584 FBgn0002525 6943.616667 266.97 409.4166667 0.000864103 0.022474435 0.014654997 1 -1 0 0.15 dme-miR-1007-3p 7mer-m8 TGAGCTT 2L 5546305 5546311 + 2L_5546305_5546311_+ 0.620203442 0.619727979 0.619965711 0.000336159 Lam FBtr0307058|FBtr0079100|FBtr0307059|FBtr0346460 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 2L + 5546239 5546358 3'utr Lam FlyBase G2121.1 TTTTTAGCCATGGCCATAGGGTTTACGATCCACCAAAACGGCTTTCTCCCGGTTTAGACCGGTTCTTGAGCTTCCTGCAGACATTTTACCGGACGAGCAACAATAAGAACAGCAACAACA 28 5546314 0.999960449 12 26 176 0.90625 0.860338007 0.03125 0.142857143 0.25 28 0 3 29 2L:5546239-5546358 7 Lam FBtr0307059|FBtr0346460|FBtr0307058|FBtr0079100 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 TGAGCTT 7mer-m8 dme-miR-1007-3p 2L + 5546283 5546339 3'utr Lam FlyBase G1687.1 TCTCCCGGTTTAGACCGGTTCTTGAGCTTCCTGCAGACATTTTACCGGACGAGCAAC 13 5546324 0.980947938 9 12 87 0.933333333 1.146128036 0.4 0.153846154 0.266666667 13 1 0 14 2L:5546283-5546339 7 11 585 FBgn0002525 6943.616667 266.97 409.4166667 0.001584189 0.041203131 0.026867494 -9 -19 -14 0.15 dme-miR-980-5p 7mer-m1 AAAAACT 2L 5546538 5546544 + 2L_5546538_5546544_+ 0.696126929 0.733890418 0.715008674 0.026702827 Lam FBtr0307058|FBtr0079100|FBtr0307059|FBtr0346460 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 2L + 5546421 5546574 3'utr Lam FlyBase G2122.1 ACGAAAGAAAATGGAAGTACACGTAGCGGCTCAGCGATCCGTCGCATTTTTTATGGGTGGGCGTGGTCGCGTTTTACGCCGGCCAAACAAATGCAACGCCCACACAGACTATTATACAAAAACTGATGAATACAACTAAATTTTAAGTACATCT 68 5546547 0.999986213 15 61 384 0.904109589 1.819543936 0.04109589 0.073529412 0.136986301 68 7 0 66 2L:5546421-5546574 7 Lam FBtr0307059|FBtr0346460|FBtr0307058|FBtr0079100 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 AAAAACT 7mer-m1 dme-miR-980-5p 2L + 5546512 5546571 3'utr Lam FlyBase G1690.1 TGCAACGCCCACACAGACTATTATACAAAAACTGATGAATACAACTAAATTTTAAGTACA 45 5546547 0.970508596 8 42 243 0.938461538 1.484299839 0.015384615 0.377777778 0.569230769 45 3 1 61 2L:5546512-5546571 7 34.5 586 FBgn0002525 6943.616667 266.97 409.4166667 0.004968592 0.129228003 0.084266232 -9 -9 -9 0.15 dme-miR-184-3p 7mer-A1 CCGTCCA 2L 575294 575300 + 2L_575294_575300_+ 0.685275997 0.823186635 0.754231316 0.09751752 cold FBtr0310022|FBtr0078069 575235|575235 575734|575734 2L + 575242 575330 3'utr cold FlyBase G882.1 AGAGCCTTTGCTATACCAAGCACATTTCGCTTTTTGTATTATTTAAACGAAGCCGTCCATAAGCTAAGTAGATTCCACACTCCATTTAA 133 575301 0.800175826 19 115 820 0.858108108 1.802773725 0.222972973 0.090225564 0.182432432 133 20 1 127 2L:575242-575330 7 cold FBtr0310022|FBtr0078069 575235|575235 575734|575734 CCGTCCA 7mer-A1 dme-miR-184-3p 2L + 575241 575373 3'utr cold FlyBase G706.1 AAGAGCCTTTGCTATACCAAGCACATTTCGCTTTTTGTATTATTTAAACGAAGCCGTCCATAAGCTAAGTAGATTCCACACTCCATTTAAAACTACACCGTCAAAGTGCCTTGACTCAGTTGGGAAGTAATGC 97 575301 0.840128125 20 85 605 0.888111888 1.626682466 0.27972028 0.350515464 0.559440559 97 14 2 127 2L:575241-575373 7 84.5 587 FBgn0031268 127.6166667 15.33333333 23.50333333 0.662139219 5.510869565 3.595234718 -7 -7 -7 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 2L 5768512 5768517 - 2L_5768512_5768517_- 0.984477903 0.999988422 0.992233163 0.01096758 CG9171 FBtr0332038|FBtr0301235|FBtr0301236|FBtr0301234|FBtr0332039 5767590|5767000|5768251|5768251|5767590 5769315|5769315|5769315|5769315|5769315 2L - 5768478 5768629 3'utr CG9171 FlyBase G7904.1 ATTGGATATTCTTTTCAAAATACTCAAAAAGAGAAATTGAGAGCAACATTATTTTCGTATACCGGGGCGAGTTTCCTAGACATCAGCAAAACAAACAGTCTTACCACTTTTTTGTGTTTTATATATTTCCGCATTAAAGGCATAGATTAAAC 31 5768518 0.986638151 12 30 256 0.96875 1.491361694 0.03125 0.032258065 0.0625 31 1 0 31 2L:5768478-5768629 6 CG9171 FBtr0332039|FBtr0301236|FBtr0301234|FBtr0332038|FBtr0301235 5767590|5768251|5768251|5767590|5767000 5769315|5769315|5769315|5769315|5769315 TGTGTT 6mer3-8 dme-miR-317-3p 2L - 5768495 5768533 3'utr CG9171 FlyBase G6144.1 AGTCTTACCACTTTTTTGTGTTTTATATATTTCCGCATT 5 5768518 0.982122955 4 5 69 1 1 0 0.6 0.8 5 0 0 10 2L:5768495-5768533 6 6.5 588 FBgn0031738 813.1933333 26.58333333 40.79333333 0.007993179 0.244514107 0.159339761 1 1 1 0.15 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 5800817 5800824 - 2L_5800817_5800824_- 0.569613747 0.602896908 0.586255328 0.023534776 CG14005 FBtr0079160 5800515 5800869 2L - 5800700 5800859 coding-3'utr CG14005 FlyBase G7919.1 TAGCACCACGTGGTAAGGACATTGTATGACAGCTTTAGCTTTAAGTTGGGAATAGAGTCGCGGCGCTCGACCCTGTGTATGTTTTTCAATTCGTTCCTTTCTCAGACACAGATGTCTAATTCACTCGACGTACAAAGCAGCAGCATAGCGAACCGAAGAT 105 5800825 0.999996235 14 100 964 0.96124031 1.792391689 0.186046512 0.19047619 0.341085271 105 4 1 124 2L:5800700-5800859 8 CG14005 FBtr0079160 5800515 5800869 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 5800788 5800870 stop_codon CG14005 FlyBase G6159.1 ATCCCGACTACTAGCACCACGTGGTAAGGACATTGTATGACAGCTTTAGCTTTAAGTTGGGAATAGAGTCGCGGCGCTCGACC 55 5800825 0.989660082 6 52 502 0.957746479 1.832508913 0.183098592 0.2 0.38028169 55 3 0 68 2L:5800788-5800870 8 67 589 FBgn0031739 237 20.57 31.17666667 0.282700422 3.257170637 2.149043088 1 1 1 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2L 5921394 5921400 + 2L_5921394_5921400_+ 0.629989999 0.598650832 0.614320415 0.022160161 bchs FBtr0079144 5921241 5922776 2L + 5921377 5921421 3'utr bchs FlyBase G2162.1 AAGTTATTTTTACTTCAACCAAAGGCTGTTATATGATTTTACACT 81 5921406 0.615073393 7 81 526 1 1.963787827 0.184782609 0.135802469 0.239130435 81 0 0 92 2L:5921377-5921421 7 bchs FBtr0079144 5921241 5922776 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L + 5921377 5921418 3'utr bchs FlyBase G1718.1 AAGTTATTTTTACTTCAACCAAAGGCTGTTATATGATTTTAC 59 5921406 0.617539291 9 59 385 1 1.986771734 0.12371134 0.423728814 0.649484536 59 0 0 97 2L:5921377-5921418 7 70 590 FBgn0043362 457.73 4.51 6.893333333 0.152928582 15.5210643 10.15473888 -12 -12 -12 0.15 dme-bantam-3p 6mer3-8 TGATCT 2L 5955067 5955072 + 2L_5955067_5955072_+ 0.882596863 0.922733881 0.902665372 0.028381145 CG9044 FBtr0333231|FBtr0273412 5955000|5955000 5955235|5955235 2L + 5955016 5955162 3'utr CG9044 FlyBase G2192.1 TAGAAAATTGAATATAGCCTGTACCAATTATTGTGCAAAGTTTAAAATTGTTGATCTTAATTGACTATGTTATTTAATGTCAGATTAGTTTTATTAACTTAGGCTAGAGCTTTCAATCAATAAGAAATGGTGCTGTACCACGATTTA 136 5955065 0.885226338 25 129 1131 0.935294118 1.50242712 0.123529412 0.205882353 0.364705882 136 7 4 159 2L:5955016-5955162 6 CG9044 FBtr0333231|FBtr0273412 5955000|5955000 5955235|5955235 TGATCT 6mer3-8 dme-bantam-3p 2L + 5955016 5955095 3'utr CG9044 FlyBase G1739.1 TAGAAAATTGAATATAGCCTGTACCAATTATTGTGCAAAGTTTAAAATTGTTGATCTTAATTGACTATGTTATTTAATGT 79 5955065 0.840761897 12 76 675 0.972972973 1.73239376 0.171171171 0.316455696 0.513513514 79 2 1 108 2L:5955016-5955095 6 62.5 591 FBgn0031752 511 13.98 21.38 0.122309198 4.470672389 2.923292797 2 2 2 0.15 dme-miR-184-5p 8mer-A1 TGATAAGA 2L 5973473 5973480 - 2L_5973473_5973480_- 0.599454464 0.601137374 0.600295919 0.00118999 chic FBtr0079235|FBtr0309213|FBtr0079234|FBtr0079236 5972898|5973005|5972898|5972113 5973576|5973576|5973576|5973576 2L - 5973412 5973656 stop_codon chic FlyBase G7933.1 ACGAGGATCCCGTTCAGCCCCAGCAGGCCGCTTCCGTGGTAGAGAAACTTGGAGATTATCTGATTACTTGCGGGTACTAGGAGAATAGATCAACACAAACACCCCCATCAACCACAACAACAACAACACACACACACCAACAACTACAACTACAACAACAACAGCAGCAACAAATTTGATAAGAGCGAACCGTAAATGAACTAATAACACATAAAAAGTAATTATTAATATTTAAATTTATGGGA 90 5973481 0.964330644 25 84 434 0.935185185 1.305351369 0.259259259 0.166666667 0.305555556 90 3 4 101 2L:5973412-5973656 8 chic FBtr0079234|FBtr0079236|FBtr0079233|FBtr0309212|FBtr0079235|FBtr0309213 5972898|5972113|5973201|5973322|5972898|5973005 5973576|5973576|5973576|5973576|5973576|5973576 TGATAAGA 8mer-A1 dme-miR-184-5p 2L - 5973440 5973496 3'utr chic FlyBase G6171.1 ACAGCAGCAACAAATTTGATAAGAGCGAACCGTAAATGAACTAATAACACATAAAAA 19 5973481 0.932080192 7 19 74 1 1.431363764 0.148148148 0.263157895 0.481481481 19 0 0 27 2L:5973440-5973496 8 21 592 FBgn0000308 17707.58333 1966.28 3025.8 0.001185933 0.010680066 0.006940313 1 1 1 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC 2L 5990208 5990214 - 2L_5990208_5990214_- 0.661359216 0.661490304 0.66142476 9.27E-05 lid FBtr0307071|FBtr0345336 5989461|5989398 5990641|5990641 2L - 5990139 5990277 3'utr lid FlyBase G7940.1 AATTTTATAATATATTTTACCATTACCTGCTATTCTTAGTTTTTGTTAATTTAATTCACTTTTTGTGTTCGCCTCTCGAGTTTTGGTTCAGTGCGCACGCAAAGTTTTCTTACGTTTTATTTGACTTTTTCCTTTAATC 197 5990215 0.946594863 15 190 2416 0.969957082 1.655138435 0.060085837 0.137055838 0.270386266 197 3 4 226 2L:5990139-5990277 7 lid FBtr0307071|FBtr0345336 5989461|5989398 5990641|5990641 TGTGTTC 7mer-m8 dme-miR-317-3p 2L - 5990196 5990271 3'utr lid FlyBase G6180.1 ATAATATATTTTACCATTACCTGCTATTCTTAGTTTTTGTTAATTTAATTCACTTTTTGTGTTCGCCTCTCGAGTT 119 5990215 0.827908948 7 111 1396 0.943396226 1.574031268 0.006289308 0.277310924 0.459119497 119 6 3 150 2L:5990196-5990271 7 72 593 FBgn0031759 1960.226667 33.73333333 51.87 0.036730446 2.134387352 1.388085599 1 1 1 0.15 dme-miR-33-5p 7mer-A1 AATGCAA 2L 5990345 5990351 - 2L_5990345_5990351_- 0.782908388 0.78147995 0.782194169 0.001010031 lid FBtr0307071|FBtr0345336 5989461|5989398 5990641|5990641 2L - 5990331 5990378 3'utr lid FlyBase G7942.1 GGATTAATAATTAAGCAAAAGATATGAAATGCAAACAAAGCAACACAA 13 5990350 0.90985326 5 13 37 1 1.204119983 0.25 0.230769231 0.375 13 0 0 16 2L:5990331-5990378 7 lid FBtr0307071|FBtr0345336 5989461|5989398 5990641|5990641 AATGCAA 7mer-A1 dme-miR-33-5p 2L - 5990335 5990371 3'utr lid FlyBase G6181.1 TAATTAAGCAAAAGATATGAAATGCAAACAAAGCAAC 6 5990354 0.935340308 2 5 16 0.909090909 1 0.181818182 0.5 0.727272727 6 1 0 10 2L:5990335-5990371 7 6.5 594 FBgn0031759 1960.226667 33.73333333 51.87 0.003315943 0.192687747 0.125313283 -1 3 1 0.15 dme-miR-968-5p 6mer3-8 ACTACT 2L 5990576 5990581 - 2L_5990576_5990581_- 0.806087429 0.522278882 0.664183155 0.200682915 lid FBtr0307071|FBtr0345336 5989461|5989398 5990641|5990641 2L - 5990543 5990670 stop_codon lid FlyBase G7943.1 AGCAGCGGGCGGTGCAATCGGCGCGGTAGAGTAACGTATATAGAGTCCAGGAGGTGCAGTAACAGCCGATTGTGTTTTACGCATGATGTACTACTAAATACCCGATAAAGGCCGTCTACCGGTATTTA 93 5990584 0.935817095 14 92 504 0.991666667 2.075546961 0.166666667 0.215053763 0.391666667 93 1 0 119 2L:5990543-5990670 6 lid FBtr0307071|FBtr0345336 5989461|5989398 5990641|5990641 ACTACT 6mer3-8 dme-miR-968-5p 2L - 5990563 5990651 stop_codon lid FlyBase G6182.1 GGCGCGGTAGAGTAACGTATATAGAGTCCAGGAGGTGCAGTAACAGCCGATTGTGTTTTACGCATGATGTACTACTAAATACCCGATAA 72 5990584 0.969101785 6 69 389 0.973451327 1.740362689 0.14159292 0.402777778 0.619469027 72 2 1 110 2L:5990563-5990651 6 70 595 FBgn0031759 1960.226667 33.73333333 51.87 0.035710156 2.075098814 1.349527665 3 3 3 0.15 dme-miR-184-3p 6mer3-8 TCCGTC 2L 6002231 6002236 + 2L_6002231_6002236_+ 0.886069378 0.915701635 0.900885506 0.02095313 Tsp26A FBtr0307300|FBtr0332600|FBtr0113024 6001736|6001736|6001736 6003738|6003738|6003738 2L + 6002214 6002288 3'utr Tsp26A FlyBase G2220.1 AACTAAAGCAAACGCATTCCGTCTTCGTGGACATTGACTAATATTAACTAGGTTGCCAAATTTGTTGCTGTTTTT 85 6002230 0.907424073 7 84 493 0.989795918 1.986771734 0.408163265 0.152941176 0.265306122 85 1 0 97 2L:6002214-6002288 6 Tsp26A FBtr0332600|FBtr0113024|FBtr0307300 6001736|6001736|6001736 6003738|6003738|6003738 TCCGTC 6mer3-8 dme-miR-184-3p 2L + 6002215 6002258 3'utr Tsp26A FlyBase G1770.1 ACTAAAGCAAACGCATTCCGTCTTCGTGGACATTGACTAATATT 53 6002230 0.910000636 3 50 278 0.987179487 1.58546073 0.448717949 0.384615385 0.58974359 52 0 1 77 2L:6002215-6002258 6 64 596 FBgn0031760 374.3466667 15.47666667 23.65666667 0.170964525 4.135257377 2.705368466 1 1 1 0.15 dme-miR-1008-3p 8mer-A1 AGCTGTGA 2L 6002422 6002429 + 2L_6002422_6002429_+ 0.404617597 0.50351747 0.454067534 0.06993279 Tsp26A FBtr0307300|FBtr0332600|FBtr0113024 6001736|6001736|6001736 6003738|6003738|6003738 2L + 6002409 6002448 3'utr Tsp26A FlyBase G2221.1 TATCTTGAAATGCAGCTGTGATATATTTTTAAAGAAAAGT 57 6002434 0.705512977 10 46 493 0.825 1.51851394 0.1125 0.263157895 0.475 57 13 1 66 2L:6002409-6002448 8 Tsp26A FBtr0332600|FBtr0113024|FBtr0307300 6001736|6001736|6001736 6003738|6003738|6003738 AGCTGTGA 8mer-A1 dme-miR-1008-3p 2L + 6002408 6002452 3'utr Tsp26A FlyBase G1771.1 TTATCTTGAAATGCAGCTGTGATATATTTTTAAAGAAAAGTATAG 52 6002435 0.961990547 11 47 484 0.9375 1.875061263 0.125 0.403846154 0.6125 52 5 0 75 2L:6002408-6002452 8 54.5 597 FBgn0031760 374.3466667 15.47666667 23.65666667 0.145586978 3.52143011 2.303790334 -12 -13 -12.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 6002839 6002844 + 2L_6002839_6002844_+ 0.999999544 0.999999799 0.999999672 2.12E-07 Tsp26A FBtr0307300|FBtr0332600|FBtr0113024 6001736|6001736|6001736 6003738|6003738|6003738 2L + 6002817 6002860 3'utr Tsp26A FlyBase G2225.1 AGGAAAACATTGATTCGCTCTTGTACCTTTTTAAATCTATATTG 39 6002838 0.710189588 6 39 430 1 1.662757832 0.043478261 0.179487179 0.304347826 39 0 0 46 2L:6002817-6002860 6 Tsp26A FBtr0332600|FBtr0113024|FBtr0307300 6001736|6001736|6001736 6003738|6003738|6003738 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 6002825 6002861 3'utr Tsp26A FlyBase G1773.1 ATTGATTCGCTCTTGTACCTTTTTAAATCTATATTGC 26 6002838 0.72004263 5 26 302 1 1.544068044 0 0.307692308 0.485714286 26 0 0 35 2L:6002825-6002861 6 32.5 598 FBgn0031760 374.3466667 15.47666667 23.65666667 0.086817923 2.099935387 1.373819924 1 1 1 0.15 dme-miR-980-3p 8mer-A1 GGCAGCTA 2L 6003357 6003364 + 2L_6003357_6003364_+ 0.668349188 0.668457206 0.668403197 7.64E-05 Tsp26A FBtr0307300|FBtr0332600|FBtr0113024 6001736|6001736|6001736 6003738|6003738|6003738 2L + 6003307 6003382 3'utr Tsp26A FlyBase G2227.1 TGCCCAAAAATCTTGTATGTACACTTGCAACTGAGCAATTGGCCAGATGTGGCAGCTAATACACTTTTTGGATATG 104 6003356 0.966414869 6 101 545 0.977777778 2.120573931 0.007407407 0.230769231 0.407407407 104 3 0 132 2L:6003307-6003382 8 Tsp26A FBtr0332600|FBtr0113024|FBtr0307300 6001736|6001736|6001736 6003738|6003738|6003738 GGCAGCTA 8mer-A1 dme-miR-980-3p 2L + 6003303 6003380 3'utr Tsp26A FlyBase G1775.1 AATATGCCCAAAAATCTTGTATGTACACTTGCAACTGAGCAATTGGCCAGATGTGGCAGCTAATACACTTTTTGGATA 58 6003356 0.965372589 4 57 307 0.988505747 1.934498451 0 0.362068966 0.574712644 58 1 0 86 2L:6003303-6003380 8 79 599 FBgn0031760 374.3466667 15.47666667 23.65666667 0.211034335 5.104458324 3.3394392 1 1 1 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2L 6007585 6007591 - 2L_6007585_6007591_- 0.649452485 0.671742112 0.660597299 0.015761127 CG9098 FBtr0332602|FBtr0079228|FBtr0079229 6007362|6007362|6007503 6007907|6007907|6007907 2L - 6007576 6007616 3'utr CG9098 FlyBase G7976.1 AAGAGCCACCTCACTCTGATGTACTACCAAAGTCTTGTATT 22 6007597 0.706474109 4 20 127 0.857142857 1.380211242 0.142857143 0.181818182 0.357142857 22 4 0 24 2L:6007576-6007616 7 CG9098 FBtr0079228|FBtr0079229|FBtr0332602 6007362|6007503|6007362 6007907|6007907|6007907 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 6007580 6007606 3'utr CG9098 FlyBase G6210.1 TCACTCTGATGTACTACCAAAGTCTTG 7 6007595 0.679050878 2 7 37 1 1 0.1 0.428571429 0.6 7 0 0 10 2L:6007580-6007606 7 13.5 600 FBgn0031762 5 0.196666667 0.31 2.7 68.6440678 43.5483871 6 4 5 0.15 dme-miR-277-3p 7mer-A1 GCATTTA 2L 6041268 6041274 - 2L_6041268_6041274_- 0.822339775 0.823340007 0.822839891 0.000707248 ade2 FBtr0079219|FBtr0079220|FBtr0079221 6041179|6041179|6041179 6041313|6041313|6041313 2L - 6041228 6041289 3'utr ade2 FlyBase G7995.1 TTAAATAGGTTCTTGGCATTTATGACCTGATATATCTAAATACTATATACACGAATTTGTTT 63 6041270 0.987501565 14 59 593 0.929411765 1.897627091 0.258823529 0.238095238 0.435294118 63 6 0 79 2L:6041228-6041289 7 ade2 FBtr0079219|FBtr0079220|FBtr0079221 6041179|6041179|6041179 6041313|6041313|6041313 GCATTTA 7mer-A1 dme-miR-277-3p 2L - 6041248 6041289 3'utr ade2 FlyBase G6217.1 TTAAATAGGTTCTTGGCATTTATGACCTGATATATCTAAATA 30 6041269 0.652043457 8 30 277 1 1.716003344 0.173076923 0.6 0.769230769 30 0 0 52 2L:6041248-6041289 7 45 601 FBgn0000052 854.3333333 23.79 36.27666667 0.052672649 1.891551072 1.240466783 -4 -5 -4.5 0.15 dme-miR-79-3p 6mer2-7 AGCTTT 2L 6046713 6046718 - 2L_6046713_6046718_- 0.999405632 0.99975894 0.999582286 0.000249821 slmo FBtr0343130|FBtr0079218|FBtr0299810|FBtr0079217|FBtr0112945 6046514|6046652|6046649|6046652|6046649 6047052|6047052|6047052|6047052|6047052 2L - 6046678 6046732 3'utr slmo FlyBase G8015.1 ACATAGTCAATGTAAGCTTTGTAAGCCGCCGCAGATTTCGAAGAACGAGAGGAGC 12 6046719 0.970537166 7 12 69 1 1.113943352 0 0.083333333 0.153846154 12 0 0 13 2L:6046678-6046732 6 slmo FBtr0112945|FBtr0343130|FBtr0079218|FBtr0299810|FBtr0079217 6046649|6046514|6046652|6046649|6046652 6047052|6047052|6047052|6047052|6047052 AGCTTT 6mer2-7 dme-miR-79-3p 2L - 6046686 6046728 3'utr slmo FlyBase G6233.1 AGTCAATGTAAGCTTTGTAAGCCGCCGCAGATTTCGAAGAACG 6 6046720 0.822863583 3 5 35 0.933333333 0.84509804 0.066666667 0.833333333 0.933333333 6 0 1 14 2L:6046686-6046728 6 7 602 FBgn0029161 669.6266667 62.72666667 95.86333333 0.010453586 0.111595281 0.07302062 1 2 1.5 0.15 dme-miR-305-5p 7mer-m8 AGTACAA 2L 6046966 6046972 - 2L_6046966_6046972_- 0.6432052 0.643251289 0.643228244 3.26E-05 slmo FBtr0343130|FBtr0079218|FBtr0299810|FBtr0079217|FBtr0112945 6046514|6046652|6046649|6046652|6046649 6047052|6047052|6047052|6047052|6047052 2L - 6046929 6047034 3'utr slmo FlyBase G8017.1 TGCAAGGTCGCGCGGGGGCTGTTCACTAGTGAATTATTTAGATGGCGCGCGGTCGTCGTTTTAGTACAACTAATTAATCGATGGCACGATGGACATGGACAGCAAC 82 6046974 0.942682906 14 80 621 0.978947368 1.667452953 0.336842105 0.146341463 0.263157895 82 1 1 93 2L:6046929-6047034 7 slmo FBtr0112945|FBtr0343130|FBtr0079218|FBtr0299810|FBtr0079217 6046649|6046514|6046652|6046649|6046652 6047052|6047052|6047052|6047052|6047052 AGTACAA 7mer-m8 dme-miR-305-5p 2L - 6046929 6047030 3'utr slmo FlyBase G6235.1 AGGTCGCGCGGGGGCTGTTCACTAGTGAATTATTTAGATGGCGCGCGGTCGTCGTTTTAGTACAACTAATTAATCGATGGCACGATGGACATGGACAGCAAC 56 6046974 0.882109073 11 54 384 0.948051948 1.164352856 0.376623377 0.267857143 0.467532468 56 0 4 73 2L:6046929-6047030 7 40.5 603 FBgn0029161 669.6266667 62.72666667 95.86333333 0.060481462 0.645658412 0.422476442 2 2 2 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 2L 6053818 6053824 + 2L_6053818_6053824_+ 0.617417835 0.619458976 0.618438405 0.001443346 CG9135 FBtr0343121 6053257 6053877 2L + 6053717 6053866 3'utr CG9135 FlyBase G2252.1 ACTACAAAACACGTAAATTAACGAACTAAGCGCATAGGTTACATATAAAAAGTATACCATGGAAAAATCCAATACCAGTTGCAACTATTAATAGTACATCATGCATTTTAATCTTATACAAAGGAATATTTAAATAAAGAGAATGTTAGT 28 6053818 0.978030085 14 26 180 0.971428571 1.230448921 0.057142857 0.178571429 0.342857143 28 0 1 34 2L:6053717-6053866 7 CG9135 FBtr0343121 6053257 6053877 TGCATTT 7mer-m8 dme-miR-277-3p 2L + 6053760 6053834 3'utr CG9135 FlyBase G1794.1 TATAAAAAGTATACCATGGAAAAATCCAATACCAGTTGCAACTATTAATAGTACATCATGCATTTTAATCTTATA 18 6053818 0.987390213 7 17 148 0.961538462 1.397940009 0 0.333333333 0.538461538 18 1 0 25 2L:6053760-6053834 7 11.5 604 FBgn0031769 791.34 43.62666667 67.18666667 0.014532312 0.263600244 0.171164914 0 0 0 0.15 dme-miR-995-5p 6mer3-8 AATTCG 2L 6073589 6073594 + 2L_6073589_6073594_+ 0.987034062 0.638599323 0.812816693 0.24638061 Kr-h2 FBtr0343126|FBtr0079192 6073461|6073461 6073961|6073961 2L + 6073487 6073617 3'utr Kr-h2 FlyBase G2266.2 CAACAATCAAATGACATATGAATAAGGCTATTTAAATACCAGTTCACTTGCATAGATGTTCACACAGGAGATTGGGGTTCATCCGTTTTATTTGTTAGCCGAAATTCGTTGCACCTTTTCGAAGCGAAACT 21 6073596 0.975707433 15 20 169 0.958333333 1.361727836 0.208333333 0.095238095 0.208333333 21 1 0 23 2L:6073487-6073617 6 Kr-h2 FBtr0079192|FBtr0343126|FBtr0302212 6073461|6073461|6073461 6073961|6073961|6073712 AATTCG 6mer3-8 dme-miR-995-5p 2L + 6073581 6073612 3'utr Kr-h2 FlyBase G1808.1 TTAGCCGAAATTCGTTGCACCTTTTCGAAGCG 7 6073596 0.713862806 4 7 49 1 1.204119983 0.25 0.714285714 0.875 7 0 0 16 2L:6073581-6073612 6 6 605 FBgn0266449 611 49.99666667 76.03333333 0.009819967 0.120008001 0.078912758 -7 -7 -7 0.15 dme-miR-14-3p 7mer-m8 AAGACTG 2L 6095586 6095592 + 2L_6095586_6095592_+ 0.671795828 0.671795075 0.671795451 4.95E-07 Kr-h1 FBtr0344438|FBtr0344437 6095555|6095555 6096498|6096498 2L + 6095552 6095743 stop_codon Kr-h1 FlyBase G2287.1 CCTAGGGGTCCAAGGCCGATCCCCAATCAGCATTAAGACTGTCCAAACAAATTCTAACTGAAATTAGCCTAAGTTTTTTCTCTGAGGTTCGGGGTTAGGCCTGGAAAAAGAAAGCATAGAAACGTATGGATATGGCAGTGAGATAGTTTTCCAGCAGCGAAAATGAAAATGCCAAAAGTATTAAAAAAGGGA 168 6095583 0.941213682 18 157 850 0.928205128 1.78055732 0.087179487 0.160714286 0.276923077 168 12 2 181 2L:6095552-6095743 7 Kr-h1 FBtr0344437|FBtr0344438 6095555|6095555 6096498|6096498 AAGACTG 7mer-m8 dme-miR-14-3p 2L + 6095544 6095661 stop_codon Kr-h1 FlyBase G1818.1 CAAGGCCTCCTAGGGGTCCAAGGCCGATCCCCAATCAGCATTAAGACTGTCCAAACAAATTCTAACTGAAATTAGCCTAAGTTTTTTCTCTGAGGTTCGGGGTTAGGCCTGGAAAAAG 106 6095584 0.999444007 16 101 522 0.953020134 1.851258349 0.053691275 0.320754717 0.516778523 106 6 1 142 2L:6095544-6095661 7 97 606 FBgn0266450 461.9366667 12.49333333 19.07 0.209985496 7.764140875 5.086523335 3 2 2.5 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 2L 6095894 6095899 + 2L_6095894_6095899_+ 1 0.999999999 0.999999999 0 Kr-h1 FBtr0344438|FBtr0344437 6095555|6095555 6096498|6096498 2L + 6095857 6095940 3'utr Kr-h1 FlyBase G2288.1 AGTTTGGCATATACAATGTAGGTATAGTTTGTTTTCCTGTGTTGTCCACTTAGTCAAATTGCAGCAATTGGCATTATGCGTATT 17 6095899 0.990520638 11 16 166 0.954545455 1.322219295 0.181818182 0.235294118 0.409090909 17 1 0 21 2L:6095857-6095940 6 Kr-h1 FBtr0344437|FBtr0344438 6095555|6095555 6096498|6096498 TGTGTT 6mer3-8 dme-miR-317-3p 2L + 6095856 6095929 3'utr Kr-h1 FlyBase G1820.1 TAGTTTGGCATATACAATGTAGGTATAGTTTGTTTTCCTGTGTTGTCCACTTAGTCAAATTGCAGCAATTGGCA 19 6095906 0.755073136 11 18 168 1 1.397940009 0.4 0.315789474 0.48 19 0 0 25 2L:6095856-6095929 6 10.5 607 FBgn0266450 461.9366667 12.49333333 19.07 0.022730389 0.840448239 0.550603041 -5 -12 -8.5 0.15 dme-miR-184-5p 6mer3-8 TGATAA 2L 6096304 6096309 + 2L_6096304_6096309_+ 0.839281686 0.783924444 0.811603065 0.039143522 Kr-h1 FBtr0344438|FBtr0344437 6095555|6095555 6096498|6096498 2L + 6096238 6096345 3'utr Kr-h1 FlyBase G2291.1 CTAAATAAGGGAAAACTGAGGAAAAAGGATCGGTAACTTTAATTTTACACACGGAGAATATTGAACTGATAAACAAGAAGAAAGCAAGCATAACTACGTTTATATACA 319 6096298 0.954860386 12 310 1424 0.975062344 1.814025507 0.02244389 0.194357367 0.359102244 319 5 5 391 2L:6096238-6096345 6 Kr-h1 FBtr0344437|FBtr0344438 6095555|6095555 6096498|6096498 TGATAA 6mer3-8 dme-miR-184-5p 2L + 6096259 6096319 3'utr Kr-h1 FlyBase G1823.1 AAAAAGGATCGGTAACTTTAATTTTACACACGGAGAATATTGAACTGATAAACAAGAAGAA 205 6096298 0.680934594 8 193 894 0.949152542 2.146128036 0.047457627 0.356097561 0.552542373 205 14 1 280 2L:6096259-6096319 6 253.5 608 FBgn0266450 461.9366667 12.49333333 19.07 0.548776528 20.29082177 13.29313057 6 6 6 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 6096906 6096912 - 2L_6096906_6096912_- 0.658763075 0.6587557 0.658759388 5.23E-06 CG9175 FBtr0079212|FBtr0079211 6096696|6096696 6097167|6097167 2L - 6096885 6096954 3'utr CG9175 FlyBase G8041.1 TGTTTATCTCTCTAGCCACCGCAAACGAAGCCTTGCTCGTTTGGCAGCTTTGCCCGTTGTACATGATTTT 1317 6096914 0.790274106 11 1305 11776 0.987991995 2.170555059 0.350233489 0.119210326 0.226150767 1317 9 9 1481 2L:6096885-6096954 7 CG9175 FBtr0079212|FBtr0079211 6096696|6096696 6097167|6097167 GGCAGCT 7mer-m8 dme-miR-980-3p 2L - 6096889 6096958 3'utr CG9175 FlyBase G6254.1 AATTTGTTTATCTCTCTAGCCACCGCAAACGAAGCCTTGCTCGTTTGGCAGCTTTGCCCGTTGTACATGA 891 6096914 0.851952976 11 886 7867 0.995780591 3.151063253 0.319268636 0.405162738 0.627285513 891 6 0 1416 2L:6096889-6096958 7 1092 609 FBgn0031779 121.6666667 7.2 10.92 8.975342466 151.6666667 100 2 2 2 0.15 dme-miR-970-3p 6mer3-8 TCTTAT 2L 6096990 6096995 - 2L_6096990_6096995_- 0.999877846 0.999841958 0.999859902 2.53E-05 CG9175 FBtr0079212|FBtr0079211 6096696|6096696 6097167|6097167 2L - 6096956 6097024 3'utr CG9175 FlyBase G8042.1 AGTGCATAGTTTGTGCCGGCTGCCTTATCTCTTATACTAATTGCAATGTTTGCTTAGTTGTATCATAAT 115 6096993 0.988423229 12 109 1002 0.954545455 1.46834733 0.207792208 0.269565217 0.454545455 115 3 4 147 2L:6096956-6097024 6 CG9175 FBtr0079212|FBtr0079211 6096696|6096696 6097167|6097167 TCTTAT 6mer3-8 dme-miR-970-3p 2L - 6096981 6097031 3'utr CG9175 FlyBase G6255.1 TAGTTTAAGTGCATAGTTTGTGCCGGCTGCCTTATCTCTTATACTAATTGC 110 6096993 0.723822713 7 105 923 0.9625 1.710399466 0.31875 0.336363636 0.54375 110 4 2 154 2L:6096981-6097031 6 102.5 610 FBgn0031779 121.6666667 7.2 10.92 0.842465753 14.23611111 9.386446886 -2 -2 -2 0.15 dme-miR-277-3p 6mer3-8 TGCATT 2L 6097131 6097136 - 2L_6097131_6097136_- 0.940809541 0.983673498 0.962241519 0.030309425 CG9175 FBtr0079212|FBtr0079211 6096696|6096696 6097167|6097167 2L - 6097110 6097204 stop_codon CG9175 FlyBase G8043.1 CGCCGTGTTCGTGCTGTGCTCCTACATTGGCATCTGATGCTCAATGGCCAGAAGAGAGTTATTCGATTTGCATTATTAGTTTGTAAACAGGGTTT 44 6097138 0.809251049 12 43 476 0.980769231 1.707570176 0.173076923 0.181818182 0.307692308 44 1 0 51 2L:6097110-6097204 6 CG9175 FBtr0079212|FBtr0079211 6096696|6096696 6097167|6097167 TGCATT 6mer3-8 dme-miR-277-3p 2L - 6097097 6097186 stop_codon CG9175 FlyBase G6256.1 CTCCTACATTGGCATCTGATGCTCAATGGCCAGAAGAGAGTTATTCGATTTGCATTATTAGTTTGTAAACAGGGTTTAGTTTTCTGCAAT 26 6097138 0.793856487 9 24 286 0.945945946 1.243038049 0.108108108 0.346153846 0.540540541 26 1 1 35 2L:6097097-6097186 6 27.5 611 FBgn0031779 121.6666667 7.2 10.92 0.226027397 3.819444444 2.518315018 2 2 2 0.15 dme-miR-1008-3p 7mer-m8 AGCTGTG 2L 6123088 6123094 + 2L_6123088_6123094_+ 0.566214237 0.670058771 0.618136504 0.073429221 stai FBtr0333406|FBtr0079196|FBtr0079197|FBtr0304908|FBtr0079198 6123063|6123063|6123063|6123063|6123063 6123899|6123899|6124653|6124653|6123899 2L + 6123008 6123107 stop_codon stai FlyBase G2299.1 AAGGCCCAGGCCCAGGATTTGGATGGTCAGCAGAGCGCCATTGCCTCCTCAGGCTAAGTGGAGAACGATCCTGCATCGAGAGCTGTGCTCACCCACTGCA 43 6123093 0.955149943 14 39 180 0.884615385 1.662757832 0.173076923 0.186046512 0.326923077 43 6 0 46 2L:6123008-6123107 7 stai FBtr0079196|FBtr0079197|FBtr0304908|FBtr0079198|FBtr0333406 6123063|6123063|6123063|6123063|6123063 6123899|6124653|6124653|6123899|6123899 AGCTGTG 7mer-m8 dme-miR-1008-3p 2L + 6123008 6123108 stop_codon stai FlyBase G1827.1 AAGGCCCAGGCCCAGGATTTGGATGGTCAGCAGAGCGCCATTGCCTCCTCAGGCTAAGTGGAGAACGATCCTGCATCGAGAGCTGTGCTCACCCACTGCAA 30 6123093 0.972900263 15 24 144 0.853658537 1.544068044 0.243902439 0.266666667 0.463414634 30 6 0 35 2L:6123008-6123108 7 23 612 FBgn0266521 1156.12 73.38 111.3866667 0.019894129 0.313436904 0.20648791 -5 -5 -5 0.15 dme-miR-33-5p 7mer-A1 AATGCAA 2L 6123354 6123360 + 2L_6123354_6123360_+ 0.680977032 0.687150175 0.684063604 0.004365112 stai FBtr0333406|FBtr0079196|FBtr0079197|FBtr0304908|FBtr0079198 6123063|6123063|6123063|6123063|6123063 6123899|6123899|6124653|6124653|6123899 2L + 6123130 6123396 3'utr stai FlyBase G2300.1 AAAAAGAACAGCAACACTGCATAATACACCAACACATATTTAAGCAAGAAAACCCTTAAAACTGAAAACGATTTCTCAAAATTTCCAAGTATTATGAAAGCAAACGAAGCGAAGGGCAAGGGCAAAGTCTCAAGATACCGCTGAGCGAGTTTTCTCACGAGCTCTATAATGAAACACGAATAAGCTACTATAAAGCGAAAAGAAATGAATGCTTACGGCAAGTTAATGCAAAAAAAAAATTAGTAAAGGAAATCTACATTTAAACTT 204 6123352 0.964225743 32 184 958 0.90376569 1.73239376 0.138075314 0.137254902 0.263598326 204 20 3 216 2L:6123130-6123396 7 stai FBtr0079196|FBtr0079197|FBtr0304908|FBtr0079198|FBtr0333406 6123063|6123063|6123063|6123063|6123063 6123899|6124653|6124653|6123899|6123899 AATGCAA 7mer-A1 dme-miR-33-5p 2L + 6123131 6123373 3'utr stai FlyBase G1828.1 AAAAGAACAGCAACACTGCATAATACACCAACACATATTTAAGCAAGAAAACCCTTAAAACTGAAAACGATTTCTCAAAATTTCCAAGTATTATGAAAGCAAACGAAGCGAAGGGCAAGGGCAAAGTCTCAAGATACCGCTGAGCGAGTTTTCTCACGAGCTCTATAATGAAACACGAATAAGCTACTATAAAGCGAAAAGAAATGAATGCTTACGGCAAGTTAATGCAAAAAAAAAATTAGT 135 6123352 0.955968491 28 120 568 0.882022472 1.718778398 0.140449438 0.22962963 0.415730337 135 19 2 157 2L:6123131-6123373 7 47 613 FBgn0266521 1156.12 73.38 111.3866667 0.040653219 0.640501499 0.421953555 2 2 2 0.15 dme-miR-33-5p 6mer2-7 AATGCA 2L 6123429 6123434 + 2L_6123429_6123434_+ 0.999995635 0.999996598 0.999996116 7.07E-07 stai FBtr0333406|FBtr0079196|FBtr0079197|FBtr0304908|FBtr0079198 6123063|6123063|6123063|6123063|6123063 6123899|6123899|6124653|6124653|6123899 2L + 6123414 6123445 3'utr stai FlyBase G2301.1 AGCCTATGCAAGTTGAATGCATGCCTGTCATT 7 6123431 0.706712033 4 6 45 0.9 0.653212514 0 0.285714286 0.5 7 0 1 9 2L:6123414-6123445 6 stai FBtr0079196|FBtr0079197|FBtr0304908|FBtr0079198|FBtr0333406 6123063|6123063|6123063|6123063|6123063 6123899|6124653|6124653|6123899|6123899 AATGCA 6mer2-7 dme-miR-33-5p 2L + 6123412 6123442 3'utr stai FlyBase G1829.1 AAAGCCTATGCAAGTTGAATGCATGCCTGTC 7 6123426 0.710015409 3 5 32 0.833333333 1 0.25 0.571428571 0.75 7 2 0 10 2L:6123412-6123442 6 6 614 FBgn0266521 1156.12 73.38 111.3866667 0.005189773 0.081766149 0.053866411 -2 3 0.5 0.15 dme-miR-307a-3p 7mer-m8 GGTTGTG 2L 6331071 6331077 + 2L_6331071_6331077_+ 0.702618534 0.702972035 0.702795285 0.000249962 PDZ-GEF FBtr0333242|FBtr0300039|FBtr0079249|FBtr0300038 6330837|6330837|6330642|6330837 6332789|6331750|6331750|6331750 2L + 6331044 6331158 3'utr PDZ-GEF FlyBase G2335.1 CAGATAGAGTTGCCAAAATTTGTGAATGGTTGTGGTTTCAATTTCGCCAGCAATCAGAAACAACGTATCCCCGATCACCTTTACCCTTTACGGAGCTGCAAAAATATTACTAGCA 67 6331063 0.956289151 15 66 529 0.986842105 1.875061263 0.276315789 0.134328358 0.236842105 67 1 0 75 2L:6331044-6331158 7 PDZ-GEF FBtr0300038|FBtr0079249|FBtr0300039|FBtr0333242 6330837|6330642|6330837|6330837 6331750|6331750|6331750|6332789 GGTTGTG 7mer-m8 dme-miR-307a-3p 2L + 6331045 6331082 3'utr PDZ-GEF FlyBase G1853.1 AGATAGAGTTGCCAAAATTTGTGAATGGTTGTGGTTTC 16 6331070 0.659142935 5 14 141 0.894736842 0.929418926 0.368421053 0.1875 0.315789474 16 1 1 17 2L:6331045-6331082 7 23 615 FBgn0265778 1055.34 20.3 30.87333333 0.021793924 1.133004926 0.744979486 8 1 4.5 0.15 dme-miR-2b-2-5p 7mer-m8 TTGAAGA 2L 6331355 6331361 + 2L_6331355_6331361_+ 0.55630813 0.522409549 0.539358839 0.02396993 PDZ-GEF FBtr0333242|FBtr0300039|FBtr0079249|FBtr0300038 6330837|6330837|6330642|6330837 6332789|6331750|6331750|6331750 2L + 6331184 6331398 3'utr PDZ-GEF FlyBase G2336.1 TAGTAACTGAGAATTTAATTTTAGTTAGGGCTTACCATTTATTATTTAATTTAGCTAAATTCTTTGTACACACTTTCTACCCATCATTCACCGCCAGCGTAGAAGTTGCCTTTTCTCTTAAAAGAAAACGTCTGCAGGCAGACCCTCTCAGCAGACCCAACTAAAACTCTTTTGAAGACTTTTCGTCGGCATTTACAAGTGTAAGAACAGAACAA 43 6331365 0.98260541 21 42 319 0.963636364 1.72427587 0.2 0.23255814 0.4 43 2 0 53 2L:6331184-6331398 7 PDZ-GEF FBtr0300038|FBtr0079249|FBtr0300039|FBtr0333242 6330837|6330642|6330837|6330837 6331750|6331750|6331750|6332789 TTGAAGA 7mer-m8 dme-miR-2b-2-5p 2L + 6331310 6331377 3'utr PDZ-GEF FlyBase G1856.1 AACGTCTGCAGGCAGACCCTCTCAGCAGACCCAACTAAAACTCTTTTGAAGACTTTTCGTCGGCATTT 10 6331330 0.840109877 7 9 59 0.888888889 1.204119983 0 0.6 0.777777778 10 2 0 16 2L:6331310-6331377 7 12.5 616 FBgn0265778 1055.34 20.3 30.87333333 0.011844524 0.615763547 0.404880155 -10 25 7.5 0.15 dme-miR-252-5p 6mer3-8 GTACTT 2L 6332132 6332137 + 2L_6332132_6332137_+ 0.677765554 0.904923471 0.791344512 0.160624891 PDZ-GEF FBtr0333242 6330837 6332789 2L + 6332079 6332185 3'utr PDZ-GEF FlyBase G2343.1 AAATCAAATCAAACGATATTGGATATGCTATATATGTATACATTGTGCTCTTTGTACTTTTAAGTTAGACTAAATACCAAATTTGCTTTTTAAGGCTTAAGAAAAAC 82 6332161 0.991359336 19 77 828 0.949494949 1.672097858 0.262626263 0.170731707 0.313131313 82 4 1 94 2L:6332079-6332185 6 PDZ-GEF FBtr0333242 6330837 6332789 GTACTT 6mer3-8 dme-miR-252-5p 2L + 6332056 6332201 3'utr PDZ-GEF FlyBase G1861.1 GCTGAATTCGAGAAAACAAAAACAAATCAAATCAAACGATATTGGATATGCTATATATGTATACATTGTGCTCTTTGTACTTTTAAGTTAGACTAAATACCAAATTTGCTTTTTAAGGCTTAAGAAAAACATTAGATCGAAGCCTA 58 6332121 0.990771662 22 55 562 0.975609756 1.903089987 0.158536585 0.310344828 0.512195122 58 2 0 80 2L:6332056-6332201 6 38 617 FBgn0265778 1055.34 20.3 30.87333333 0.036007353 1.871921182 1.230835673 -29 11 -9 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 6333148 6333154 - 2L_6333148_6333154_- 0.656996059 0.656943303 0.656969681 3.73E-05 Pez FBtr0331226|FBtr0079284 6332879|6332879 6333292|6333292 2L - 6333124 6333235 3'utr Pez FlyBase G8066.1 TTGTTTATATCGAACAAATTTCCTTTAGTTCTCGTTTTAAAAAATCAGTACAACTCCGTTCAGCAATTTTATATTTCTACTGGCAGCTGTTGTCCCTATAATCGTTAAATTT 483 6333155 0.990083965 23 458 4598 0.953982301 2.129528774 0.02300885 0.144927536 0.269026549 483 23 3 539 2L:6333124-6333235 7 Pez FBtr0331226|FBtr0079284 6332879|6332879 6333292|6333292 GGCAGCT 7mer-m8 dme-miR-980-3p 2L - 6333118 6333197 3'utr Pez FlyBase G6276.1 AAAAAATCAGTACAACTCCGTTCAGCAATTTTATATTTCTACTGGCAGCTGTTGTCCCTATAATCGTTAAATTTTAATAC 281 6333155 0.902582566 17 264 2648 0.93627451 2.104942108 0.046568627 0.341637011 0.546568627 281 24 2 382 2L:6333118-6333197 7 367 618 FBgn0031799 375.3333333 10.13666667 15.53333333 0.977797513 36.20519566 23.62660944 1 1 1 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 2L 6415192 6415199 + 2L_6415192_6415199_+ 0.643387008 0.643367926 0.643377467 1.35E-05 CG13982 FBtr0079256 6414070 6415335 2L + 6415167 6415298 3'utr CG13982 FlyBase G2382.1 TTGTAAATTTTTAAGTTTAACTGATACCAAAGATTTATTTTGAAACTTGAATGTTACTCTCCATAGACTACATACTAGTATTTAAGTACGTTCACTATTTTCGCTGCACAGTAAATGTCATTTATTTGTGTC 115 6415191 0.903363832 21 113 864 0.984732824 2.11058971 0.022900763 0.113043478 0.221374046 115 2 0 129 2L:6415167-6415298 8 CG13982 FBtr0079256 6414070 6415335 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2L + 6415168 6415253 3'utr CG13982 FlyBase G1887.1 TGTAAATTTTTAAGTTTAACTGATACCAAAGATTTATTTTGAAACTTGAATGTTACTCTCCATAGACTACATACTAGTATTTAAGT 72 6415191 0.904059583 10 71 546 0.990291262 1.707570176 0 0.305555556 0.514563107 72 0 1 102 2L:6415168-6415253 8 80 619 FBgn0031811 23.7 1.106666667 1.73 3.375527426 72.28915663 46.24277457 1 1 1 0.15 dme-miR-283-5p 8mer-A1 TGATATTA 2L 6426138 6426145 + 2L_6426138_6426145_+ 0.407349346 0.536377479 0.471863413 0.091236715 Fic FBtr0079257 6426121 6426371 2L + 6426095 6426150 stop_codon Fic FlyBase G2390.1 CGAATCCGGATCTGGAGATCTACCGTGACCCATCTAGATGCATTGATATTAGACAA 27 6426136 0.722737755 9 27 167 1 1.491361694 0 0.148148148 0.258064516 27 0 0 31 2L:6426095-6426150 8 Fic FBtr0079257 6426121 6426371 TGATATTA 8mer-A1 dme-miR-283-5p 2L + 6426090 6426149 stop_codon Fic FlyBase G1891.1 TTCTACGAATCCGGATCTGGAGATCTACCGTGACCCATCTAGATGCATTGATATTAGACA 16 6426137 0.970407041 7 16 91 1 1.361727836 0.130434783 0.375 0.565217391 16 0 0 23 2L:6426090-6426149 8 14 620 FBgn0263278 143.1166667 8.97 13.60333333 0.09782229 1.560758082 1.02915952 2 1 1.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-m8 CTGTGAT 2L 6426260 6426266 + 2L_6426260_6426266_+ 0.661615418 0.661615258 0.661615338 7.07E-08 Fic FBtr0079257|FBtr0079257|FBtr0079257 6426121|6426121|6426121 6426371|6426371|6426371 2L + 6426243 6426308 3'utr Fic FlyBase G2392.1 AAAATAACGATGTAATTCTGTGATCATATTTAAGCTAAAAGACAACCAAAAAATGTACATAATGCA 237 6426259 0.854317163 13 218 1974 0.93220339 1.962211439 0.06440678 0.219409283 0.372881356 237 18 2 275 2L:6426243-6426308 7 Fic FBtr0079257|FBtr0079257|FBtr0079257 6426121|6426121|6426121 6426371|6426371|6426371 CTGTGAT 7mer-m8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 6426241 6426318 3'utr Fic FlyBase G1893.1 GAAAAATAACGATGTAATTCTGTGATCATATTTAAGCTAAAAGACAACCAAAAAATGTACATAATGCACAATCCAACT 151 6426258 0.933418858 14 139 1229 0.922018349 1.604226053 0.050458716 0.298013245 0.513761468 151 13 4 201 2L:6426241-6426318 7 174.5 621 FBgn0263278 143.1166667 8.97 13.60333333 1.219284966 19.45373467 12.8277383 1 2 1.5 0.15 dme-miR-283-5p 8mer-A1 TGATATTA 2L 6448480 6448487 - 2L_6448480_6448487_- 0.534076067 0.404340708 0.469208388 0.091736781 retm FBtr0339788 6448462 6449851 2L - 6448467 6448513 3'utr retm FlyBase G8125.1 AAACATTTTGTGAAAACATTGAATTGTGATATTAAAGAAAATTAAAC 46 6448490 0.69888334 6 44 372 0.963636364 1.423245874 0.272727273 0.152173913 0.290909091 46 1 1 53 2L:6448467-6448513 8 retm FBtr0339788 6448462 6449851 TGATATTA 8mer-A1 dme-miR-283-5p 2L - 6448467 6448509 3'utr retm FlyBase G6317.1 ATTTTGTGAAAACATTGAATTGTGATATTAAAGAAAATTAAAC 24 6448491 0.716369219 5 22 187 0.921052632 1.544068044 0.526315789 0.416666667 0.631578947 24 3 0 35 2L:6448467-6448509 8 34 622 FBgn0031814 365.7 13.12 20.05 0.092972382 2.591463415 1.695760599 3 4 3.5 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 2L 6449682 6449687 - 2L_6449682_6449687_- 0.999999994 0.999999559 0.999999777 2.83E-07 retm FBtr0329951|FBtr0339788|FBtr0079272 6448804|6448462|6448804 6449707|6449851|6449851 2L - 6449615 6449702 3'utr retm FlyBase G8130.1 AAAGTGGTAATATCTTGTGTTTTAGTTGTCTTTAGTTGTTTAGCAGAATGTTAGTTTGATTTTAAATTGTATTTAGCTCAAATAGGCC 62 6449688 0.71880178 19 57 754 0.909090909 1.146128036 0.324675325 0.193548387 0.350649351 62 3 4 70 2L:6449615-6449702 6 retm FBtr0329951|FBtr0339788|FBtr0079272 6448804|6448462|6448804 6449707|6449851|6449851 TGTGTT 6mer3-8 dme-miR-317-3p 2L - 6449640 6449702 3'utr retm FlyBase G6323.1 AAAGTGGTAATATCTTGTGTTTTAGTTGTCTTTAGTTGTTTAGCAGAATGTTAGTTTGATTTT 47 6449688 0.995314682 8 41 596 0.888888889 0.954242509 0.320987654 0.468085106 0.691358025 47 2 7 72 2L:6449640-6449702 6 45.5 623 FBgn0031814 365.7 13.12 20.05 0.124418923 3.467987805 2.269326683 1 1 1 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 6468697 6468704 - 2L_6468697_6468704_- 0.500028466 0.485150402 0.492589434 0.010520405 mmy FBtr0079269|FBtr0079268|FBtr0339787 6468536|6468589|6468536 6468844|6468844|6468844 2L - 6468649 6468754 3'utr mmy FlyBase G8151.1 TTTATGATTCCCCAAACTGTAGTTAGTGCACGGAAATTCCATTGATTTCAGTACTTAAAGGAGACTTGTAAAAATTTGTTACCTATTGTGTCCGTTGATTTATTTT 30 6468712 0.818240221 15 30 265 1 1.556302501 0.305555556 0.166666667 0.305555556 30 0 0 36 2L:6468649-6468754 8 mmy FBtr0079268|FBtr0339787|FBtr0079269 6468589|6468536|6468536 6468844|6468844|6468844 GTACTTAA 8mer-A1 dme-miR-252-5p 2L - 6468656 6468751 3'utr mmy FlyBase G6333.1 ATGATTCCCCAAACTGTAGTTAGTGCACGGAAATTCCATTGATTTCAGTACTTAAAGGAGACTTGTAAAAATTTGTTACCTATTGTGTCCGTTGAT 33 6468713 0.836333334 12 32 237 0.976190476 1.612783857 0.142857143 0.272727273 0.428571429 33 1 0 41 2L:6468656-6468751 8 16.5 624 FBgn0259749 867.8133333 52.42 80.18333333 0.019013305 0.314765357 0.205778424 8 9 8.5 0.15 dme-miR-14-3p 7mer-A1 AGACTGA 2L 6468812 6468818 - 2L_6468812_6468818_- 0.821649696 0.818803935 0.820226815 0.002012284 mmy FBtr0079269|FBtr0079268|FBtr0339787 6468536|6468589|6468536 6468844|6468844|6468844 2L - 6468788 6468947 stop_codon mmy FlyBase G8152.1 CACCTACGCCGGCGAGAATCTCGCCTCGCATGTGGAGGGCAAGTCGTTCACCAGTCCCGTCTACCTGCGGGACAGCCGCGATCCCTTGCACGGACACCTTTAAGATGTAGGGGATCTGCATGGACGCATAGACTGATGGACGGATAGTAGTCGTTTCGAT 497 6468811 0.8549048 13 488 1787 0.982200647 2.306067436 0.283171521 0.197183099 0.354368932 497 9 2 607 2L:6468788-6468947 7 mmy FBtr0079268|FBtr0339787|FBtr0079269 6468589|6468536|6468536 6468844|6468844|6468844 AGACTGA 7mer-A1 dme-miR-14-3p 2L - 6468787 6468846 stop_codon mmy FlyBase G6334.1 AAGATGTAGGGGATCTGCATGGACGCATAGACTGATGGACGGATAGTAGTCGTTTCGATT 408 6468811 0.817033383 8 398 1449 0.979073244 2.214181309 0.255605381 0.455882353 0.668161435 408 11 3 655 2L:6468787-6468846 7 433 625 FBgn0259749 867.8133333 52.42 80.18333333 0.498955228 8.260206028 5.400124714 -7 -7 -7 0.15 dme-miR-999-3p 6mer3-8 AGTTAA 2L 6474464 6474469 - 2L_6474464_6474469_- 0.999999995 1 0.999999998 0 CG9536 FBtr0303229|FBtr0079267 6474436|6474436 6474798|6474798 2L - 6474453 6474494 3'utr CG9536 FlyBase G8161.1 TGTAATTGAAAATGATGCTTTATTTAGTTAATAACTGTAAAT 44 6474474 0.688109184 9 39 472 0.901960784 1.361727836 0.137254902 0.159090909 0.274509804 44 4 1 46 2L:6474453-6474494 6 CG9536 FBtr0303229|FBtr0079267 6474436|6474436 6474798|6474798 AGTTAA 6mer3-8 dme-miR-999-3p 2L - 6474455 6474539 3'utr CG9536 FlyBase G6340.1 CTAGAGCCCTTACATAGATGCATACTTTCTGTTGTAGTCCTTACATGTAATTGAAAATGATGCTTTATTTAGTTAATAACTGTAA 45 6474472 0.807463949 17 36 465 0.788732394 0.84509804 0.267605634 0.422222222 0.633802817 45 8 7 56 2L:6474455-6474539 6 33 626 FBgn0031818 366.33 22.85 34.65666667 0.090082712 1.444201313 0.952197749 5 3 4 0.15 dme-miR-965-3p 7mer-m8 TACGCTT 2L 6474632 6474638 - 2L_6474632_6474638_- 0.618840626 0.619269551 0.619055088 0.000303349 CG9536 FBtr0303229|FBtr0079267 6474436|6474436 6474798|6474798 2L - 6474610 6474704 3'utr CG9536 FlyBase G8162.1 CGTACCCCCCATCAGTGTTCCCATTTTGTAATTACCGTTCGTGTGTTTCGTAGTGTCCTGTAGACTTACGCTTGCTTGCTGCGCACACCGCCGGC 44 6474639 0.985849807 16 41 374 0.921568627 1.194976603 0.254901961 0.136363636 0.254901961 44 2 2 47 2L:6474610-6474704 7 CG9536 FBtr0303229|FBtr0079267 6474436|6474436 6474798|6474798 TACGCTT 7mer-m8 dme-miR-965-3p 2L - 6474588 6474655 3'utr CG9536 FlyBase G6341.1 GTAGTGTCCTGTAGACTTACGCTTGCTTGCTGCGCACACCGCCGGCCATGCTGCTAGGAGCGGCGGAG 24 6474639 0.979784162 6 23 186 0.933333333 1.021189299 0.066666667 0.541666667 0.755555556 24 0 3 42 2L:6474588-6474655 7 25.5 627 FBgn0031818 366.33 22.85 34.65666667 0.069609369 1.115973742 0.73578917 1 1 1 0.15 dme-bantam-3p 6mer3-8 TGATCT 2L 6474746 6474751 - 2L_6474746_6474751_- 0.864895755 0.692472132 0.778683943 0.121921968 CG9536 FBtr0303229|FBtr0079267 6474436|6474436 6474798|6474798 2L - 6474710 6474774 3'utr CG9536 FlyBase G8163.1 TGAATTTTTGATATTTAAACGAATGATCTAATGATTTACGCCCATGTTTTGTATGATTCTGCATC 47 6474751 0.82828254 11 47 400 1 1.740362689 0.109090909 0.127659574 0.254545455 47 0 0 55 2L:6474710-6474774 6 CG9536 FBtr0303229|FBtr0079267 6474436|6474436 6474798|6474798 TGATCT 6mer3-8 dme-bantam-3p 2L - 6474662 6474783 3'utr CG9536 FlyBase G6342.1 ATATATTAATGAATTTTTGATATTTAAACGAATGATCTAATGATTTACGCCCATGTTTTGTATGATTCTGCATCAAGTACGTACCCCCCATCAGTGTTCCCATTTTGTAATTACCGTTCGTG 43 6474751 0.989597655 12 38 352 0.923076923 1.079181246 0.107692308 0.325581395 0.553846154 43 1 4 60 2L:6474662-6474783 6 28.5 628 FBgn0031818 366.33 22.85 34.65666667 0.077798706 1.24726477 0.822352602 0 0 0 0.15 dme-miR-263a-5p 6mer3-8 GTGCCA 2L 6496629 6496634 + 2L_6496629_6496634_+ 0.999704373 0.998001203 0.998852788 0.001204344 CG31638 FBtr0079262|FBtr0113411 6496064|6496119 6496988|6496988 2L + 6496612 6496639 3'utr CG31638 FlyBase G2449.1 TTGCGGAATAGCATTTAGTGCCAGAAAT 14 6496630 0.907088606 2 14 71 1 1.278753601 0.315789474 0.285714286 0.473684211 14 0 0 19 2L:6496612-6496639 6 CG31638 FBtr0113411|FBtr0079262 6496119|6496064 6496988|6496988 GTGCCA 6mer3-8 dme-miR-263a-5p 2L + 6496586 6496636 3'utr CG31638 FlyBase G1931.1 ATTGAAGCATAATACAGGTTCGATGTTTGCGGAATAGCATTTAGTGCCAGA 6 6496629 0.95297376 4 6 31 1 0.903089987 0.375 0.333333333 0.5 6 0 0 8 2L:6496586-6496636 6 9 629 FBgn0051638 490.34 20.43333333 31.29333333 0.018354611 0.44045677 0.287601193 -1 0 -0.5 0.15 dme-bantam-3p 6mer3-8 TGATCT 2L 6496814 6496819 + 2L_6496814_6496819_+ 0.99999886 0.999929213 0.999964036 4.93E-05 CG31638 FBtr0079262|FBtr0113411 6496064|6496119 6496988|6496988 2L + 6496745 6496825 3'utr CG31638 FlyBase G2450.1 ATTTTTGCAGTTGCCTAGTCCGAAATTCTTTTAGTTTTTCAAAAGTCTATCGATATTCAGCGGCATAGTTGATCTTTTACA 30 6496821 0.977348276 9 28 235 0.928571429 1.290034611 0 0.3 0.5 30 2 1 39 2L:6496745-6496825 6 CG31638 FBtr0113411|FBtr0079262 6496119|6496064 6496988|6496988 TGATCT 6mer3-8 dme-bantam-3p 2L + 6496795 6496825 3'utr CG31638 FlyBase G1932.1 CGATATTCAGCGGCATAGTTGATCTTTTACA 21 6496821 0.634827359 4 20 154 0.911764706 1.491361694 0 0.380952381 0.617647059 21 3 0 31 2L:6496795-6496825 6 23 630 FBgn0051638 490.34 20.43333333 31.29333333 0.046906228 1.125611746 0.734980827 -7 -7 -7 0.15 dme-miR-965-3p 7mer-A1 ACGCTTA 2L 6564093 6564099 + 2L_6564093_6564099_+ 0.823309347 0.823349562 0.823329455 2.85E-05 Ent2 FBtr0343158|FBtr0079290 6564072|6564072 6564709|6564396 2L + 6564077 6564117 3'utr Ent2 FlyBase G2469.1 TACATTTATTAGTATGACGCTTACTAACAATTTTCATTGTT 9 6564091 0.987977865 4 9 79 1 1 0 0.111111111 0.2 9 0 0 10 2L:6564077-6564117 7 Ent2 FBtr0343158|FBtr0079290 6564072|6564072 6564709|6564396 ACGCTTA 7mer-A1 dme-miR-965-3p 2L + 6564080 6564114 3'utr Ent2 FlyBase G1945.1 ATTTATTAGTATGACGCTTACTAACAATTTTCATT 6 6564091 0.674662479 3 6 54 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 2L:6564080-6564114 7 7 631 FBgn0263916 786.86 45.64666667 69.53333333 0.008896119 0.153351833 0.100671141 2 2 2 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2L 6564318 6564323 + 2L_6564318_6564323_+ 0.910561174 0.916897282 0.913729228 0.004480299 Ent2 FBtr0343158|FBtr0079290 6564072|6564072 6564709|6564396 2L + 6564248 6564336 3'utr Ent2 FlyBase G2470.1 ATTTTAATAATATGGTGTCTAATATTTCATAGTTAGACTGCACACACATAAATTTAGTTTTGCGCTCAATTCTAGTTCTAGGACTAATC 14 6564317 0.985731552 6 14 121 1 1.204119983 0.125 0.142857143 0.25 14 0 0 16 2L:6564248-6564336 6 Ent2 FBtr0343158|FBtr0079290 6564072|6564072 6564709|6564396 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2L + 6564295 6564335 3'utr Ent2 FlyBase G1947.1 ATAAATTTAGTTTTGCGCTCAATTCTAGTTCTAGGACTAAT 6 6564317 0.987218298 2 6 52 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2L:6564295-6564335 6 7 632 FBgn0263916 786.86 45.64666667 69.53333333 0.008896119 0.153351833 0.100671141 1 1 1 0.15 dme-miR-1008-3p 8mer-A1 AGCTGTGA 2L 6564580 6564587 - 2L_6564580_6564587_- 0.49953302 0.600124227 0.549828623 0.07112872 CG13766 FBtr0343161|FBtr0079330 6564110|6564361 6565169|6565169 2L - 6564544 6564608 3'utr CG13766 FlyBase G8188.1 TTATTTCATTCAATCGGATGAAGCTGTGATAAAACGAACCAAATATTCCATTGACTTGTTAGACC 21 6564590 0.77547647 8 19 137 0.916666667 1.041392685 0.083333333 0.095238095 0.208333333 21 1 1 22 2L:6564544-6564608 8 CG13766 FBtr0079330|FBtr0343161 6564361|6564110 6565169|6565169 AGCTGTGA 8mer-A1 dme-miR-1008-3p 2L - 6564540 6564609 3'utr CG13766 FlyBase G6370.1 GTTATTTCATTCAATCGGATGAAGCTGTGATAAAACGAACCAAATATTCCATTGACTTGTTAGACCCCCT 24 6564590 0.862002143 7 17 119 0.625 0.920818754 0.3 0.458333333 0.675 24 13 2 25 2L:6564540-6564609 8 15.5 633 FBgn0031834 61.51666667 4.113333333 6.276666667 0.251964237 3.768233387 2.469463622 3 3 3 0.15 dme-bantam-3p 6mer3-8 TGATCT 2L 6616826 6616831 + 2L_6616826_6616831_+ 0.947375785 0.94790806 0.947641922 0.000376393 CG11050 FBtr0079291|FBtr0079293|FBtr0079292 6616512|6616512|6616512 6617117|6617117|6617117 2L + 6616785 6616890 3'utr CG11050 FlyBase G2486.1 AAGCGTAAAGTTGCGGATCGAATTCTATCGATATATTCAATTGATCTGACTAAGGAATCCAATTGTAAATAACTTAAACGAATTGTAGACTATTTAGAAAAAAATT 152 6616825 0.87082934 20 145 1160 0.957219251 1.65079304 0.07486631 0.210526316 0.35828877 152 5 3 179 2L:6616785-6616890 6 CG11050 FBtr0079292|FBtr0079293|FBtr0079291 6616512|6616512|6616512 6617117|6617117|6617117 TGATCT 6mer3-8 dme-bantam-3p 2L + 6616808 6616893 3'utr CG11050 FlyBase G1965.1 TCTATCGATATATTCAATTGATCTGACTAAGGAATCCAATTGTAAATAACTTAAACGAATTGTAGACTATTTAGAAAAAAATTATT 99 6616825 0.927291471 8 95 772 0.97260274 2.152288344 0.061643836 0.373737374 0.575342466 99 4 0 142 2L:6616808-6616893 6 85.5 634 FBgn0031836 528.79 32.3 48.86333333 0.161689896 2.647058824 1.749778293 1 1 1 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 6633068 6633075 - 2L_6633068_6633075_- 0.499712296 0.498293513 0.499002905 0.001003243 CG31635 FBtr0331191|FBtr0331187 6632796|6632796 6634810|6634810 2L - 6633006 6633125 3'utr CG31635 FlyBase G8197.1 TGTTTCAACGTATCTTCATCAGTTAAGTGGAATTACTTAAAAAATGTACTGTACTTAATTTACAAATAGTTGATATTTCTGGTGCTTACCGGTCGCTAGAAGTTTGCCTTAAACTAGATC 79 6633076 0.790901547 18 76 710 0.966666667 1.939519253 0.088888889 0.139240506 0.244444444 79 3 0 87 2L:6633006-6633125 8 CG31635 FBtr0331187|FBtr0331191 6632796|6632796 6634810|6634810 GTACTTAA 8mer-A1 dme-miR-252-5p 2L - 6632999 6633091 3'utr CG31635 FlyBase G6376.1 ACTTAAAAAATGTACTGTACTTAATTTACAAATAGTTGATATTTCTGGTGCTTACCGGTCGCTAGAAGTTTGCCTTAAACTAGATCCCCGTTT 38 6633076 0.989174555 5 36 344 0.965517241 1.447158031 0.034482759 0.394736842 0.603448276 38 1 1 56 2L:6632999-6633091 8 44 635 FBgn0051635 607.7033333 10.19333333 15.53666667 0.07240375 4.316546763 2.832010298 1 1 1 0.15 dme-bantam-3p 8mer-A1 TGATCTCA 2L 6633661 6633668 - 2L_6633661_6633668_- 0.628890924 0.62551943 0.627205177 0.002384011 CG31635 FBtr0331191|FBtr0331187 6632796|6632796 6634810|6634810 2L - 6633592 6633723 3'utr CG31635 FlyBase G8200.1 TTAACAACGGAAATGAAGCGCAAACGAAAACAAAAGTACCCAAAATAAATCCAATTGATCTCATTATGTGATATTTGTCGTAGTGCCCAAAGCGTTCACTGTACGTGTATCTATAACCAAACCATACCATAT 484 6633669 0.989510946 23 450 4377 0.931389365 2.035829825 0.015437393 0.17768595 0.317324185 484 36 4 543 2L:6633592-6633723 8 CG31635 FBtr0331187|FBtr0331191 6632796|6632796 6634810|6634810 TGATCTCA 8mer-A1 dme-bantam-3p 2L - 6633542 6633721 3'utr CG31635 FlyBase G6379.1 AACAACGGAAATGAAGCGCAAACGAAAACAAAAGTACCCAAAATAAATCCAATTGATCTCATTATGTGATATTTGTCGTAGTGCCCAAAGCGTTCACTGTACGTGTATCTATAACCAAACCATACCATATGAGTTAAGTACAGGGTGTGTACATTCGAACACTTTTGCTCTAAGTAAACT 369 6633669 0.987791287 26 340 3224 0.919847328 1.984077034 0.04389313 0.319783198 0.520992366 369 38 4 482 2L:6633542-6633721 8 394.5 636 FBgn0051635 607.7033333 10.19333333 15.53666667 0.649165437 38.70176586 25.39154688 1 1 1 0.15 dme-miR-252-5p 7mer-m8 GTACTTA 2L 6634160 6634166 - 2L_6634160_6634166_- 0.588127216 0.588268703 0.58819796 0.000100056 CG31635 FBtr0331191|FBtr0331187 6632796|6632796 6634810|6634810 2L - 6634134 6634185 3'utr CG31635 FlyBase G8202.1 TCGTGTGGATGAAAAATTTGTACTTACCGATTCAAATGAATACTTACTGAAA 14 6634167 0.986717499 4 13 106 0.9375 1.176091259 0.6875 0.071428571 0.1875 14 1 0 15 2L:6634134-6634185 7 CG31635 FBtr0331187|FBtr0331191 6632796|6632796 6634810|6634810 GTACTTA 7mer-m8 dme-miR-252-5p 2L - 6634147 6634184 3'utr CG31635 FlyBase G6381.1 CGTGTGGATGAAAAATTTGTACTTACCGATTCAAATGA 11 6634167 0.70245094 3 11 86 1 1.230448921 0.294117647 0.454545455 0.647058824 11 0 0 17 2L:6634147-6634184 7 11.5 637 FBgn0051635 607.7033333 10.19333333 15.53666667 0.018923707 1.128188358 0.74018451 1 1 1 0.15 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 6635598 6635605 - 2L_6635598_6635605_- 0.630610529 0.630475265 0.630542897 9.56E-05 CG31635 FBtr0079326|FBtr0331188|FBtr0331189|FBtr0331190 6635543|6635543|6635543|6635543 6635647|6635647|6635647|6635647 2L - 6635560 6635624 5'utr CG31635 FlyBase G8204.1 TATATACAAAGGGGATAATTCTAGTCATAAAGGAACCATAATATTTGAAGAATTCTCTATAAATG 125 6635606 0.700874894 8 121 720 0.950704225 1.653212514 0.232394366 0.112 0.218309859 125 5 2 135 2L:6635560-6635624 8 CG31635 FBtr0331188|FBtr0079326|FBtr0331190|FBtr0331189 6635543|6635543|6635543|6635543 6635647|6635647|6635647|6635647 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 6635564 6635619 5'utr CG31635 FlyBase G6382.1 ACAAAGGGGATAATTCTAGTCATAAAGGAACCATAATATTTGAAGAATTCTCTATA 52 6635606 0.973309407 6 47 288 0.915492958 1.210853365 0.197183099 0.346153846 0.521126761 52 3 3 65 2L:6635564-6635619 8 85.5 638 FBgn0051635 607.7033333 10.19333333 15.53666667 0.14069365 8.387835186 5.50311092 1 1 1 0.15 dme-miR-317-3p 8mer-A1 TGTGTTCA 2L 6661963 6661970 + 2L_6661963_6661970_+ 0.631122309 0.631052875 0.631087592 4.91E-05 CG11070 FBtr0079297 6661698 6662033 2L + 6661921 6661994 3'utr CG11070 FlyBase G2512.1 AATAACATGCAAAGGATAAATTATTGTAGTCATATTTGGTTTTGTGTTCACAATATGTTTACATATATGTTTAA 29 6661962 0.992589672 8 28 324 0.970588235 1.217483944 0.058823529 0.137931034 0.264705882 29 0 1 33 2L:6661921-6661994 8 CG11070 FBtr0079297 6661698 6662033 TGTGTTCA 8mer-A1 dme-miR-317-3p 2L + 6661921 6661994 3'utr CG11070 FlyBase G1988.1 AATAACATGCAAAGGATAAATTATTGTAGTCATATTTGGTTTTGTGTTCACAATATGTTTACATATATGTTTAA 21 6661962 0.957462311 4 20 220 0.944444444 1.531478917 0.111111111 0.571428571 0.75 21 2 0 34 2L:6661921-6661994 8 21 639 FBgn0028467 522.98 18.67666667 28.61666667 0.040154499 1.124397644 0.73383809 1 1 1 0.15 dme-miR-317-3p 8mer-A1 TGTGTTCA 2L 6674670 6674677 + 2L_6674670_6674677_+ 0.624697765 0.606444348 0.615571056 0.012907174 CG34310 FBtr0346453|FBtr0333516 6674524|6674524 6674780|6674780 2L + 6674496 6674706 stop_codon CG34310 FlyBase G2535.1 GAGTCAAGACCCAAACGGAGCGAATATTGAGCCAAGGCTGCCAGTGCCGTCATAGACATCTTTACATACTTATAGCCTAGTGATTAGTTACCAAATTTCAACGCTGTAACATGGTGAACAATGAATGGACTTTTACTTTCTTACCTTCACTTTGGGTGGAGAGGCCCATCTTCTTGTGTTCATTTTAGAGTTAAACAGAATGGATTTTTTA 157 6674669 0.988137635 25 145 1320 0.934065934 1.62838893 0.065934066 0.133757962 0.252747253 157 9 3 170 2L:6674496-6674706 8 CG34310 FBtr0333516|FBtr0346453 6674524|6674524 6674780|6674780 TGTGTTCA 8mer-A1 dme-miR-317-3p 2L + 6674644 6674696 3'utr CG34310 FlyBase G2004.2 ACTTTGGGTGGAGAGGCCCATCTTCTTGTGTTCATTTTAGAGTTAAACAGAAT 44 6674669 0.675670051 8 42 479 0.944444444 1.707570176 0.092592593 0.204545455 0.351851852 44 3 0 51 2L:6674644-6674696 8 46 640 FBgn0085339 513.3133333 76.24666667 117.4333333 0.089613881 0.603305063 0.391711609 1 1 1 0.15 dme-bantam-3p 6mer3-8 TGATCT 2L 6677978 6677983 - 2L_6677978_6677983_- 0.791418732 0.80094314 0.796180936 0.006734768 Nhe3 FBtr0300327|FBtr0273247|FBtr0273248|FBtr0333348|FBtr0273250 6677833|6677833|6677833|6677833|6677833 6678146|6679193|6678723|6679064|6678723 2L - 6677862 6678007 3'utr Nhe3 FlyBase G8244.1 AAGTTTCAAAGCTGATTCACTTGCTGATCTATAACATTTTCCGATATTACCTAGGACCCTCCTATTTCTTACTATATATACGCTGTATTTAAAACAAAGCGAAGCTCTCTGAAAATATTAATTGTTGTGCTGTTAATTTTTAAGTC 63 6677986 0.987220525 14 62 544 0.987179487 1.886490725 0.051282051 0.206349206 0.358974359 63 1 0 77 2L:6677862-6678007 6 Nhe3 FBtr0273250|FBtr0300327|FBtr0273247|FBtr0273248|FBtr0333348 6677833|6677833|6677833|6677833|6677833 6678723|6678146|6679193|6678723|6679064 TGATCT 6mer3-8 dme-bantam-3p 2L - 6677964 6678039 3'utr Nhe3 FlyBase G6411.1 AAAACGGACTAATTGTATTCGGTTTAGTTTTTAAGTTTCAAAGCTGATTCACTTGCTGATCTATAACATTTTCCGA 56 6677986 0.789584705 6 56 469 1 1.908485019 0.061728395 0.392857143 0.580246914 56 0 0 81 2L:6677964-6678039 6 51.5 641 FBgn0028703 495.63 20.01 30.39666667 0.103908157 2.573713143 1.694264722 3 3 3 0.15 dme-miR-79-3p 7mer-m8 TAGCTTT 2L 6678077 6678083 - 2L_6678077_6678083_- 0.620168289 0.603640983 0.611904636 0.011686566 Nhe3 FBtr0300327|FBtr0273247|FBtr0273248|FBtr0333348|FBtr0273250 6677833|6677833|6677833|6677833|6677833 6678146|6679193|6678723|6679064|6678723 2L - 6678064 6678097 3'utr Nhe3 FlyBase G8245.1 ACAACATAAACTTATAGCTTTTTCGTTCTAAGCC 16 6678076 0.625529767 4 15 148 0.954545455 1.322219295 0 0.375 0.545454545 16 1 0 21 2L:6678064-6678097 7 Nhe3 FBtr0273250|FBtr0300327|FBtr0273247|FBtr0273248|FBtr0333348 6677833|6677833|6677833|6677833|6677833 6678723|6678146|6679193|6678723|6679064 TAGCTTT 7mer-m8 dme-miR-79-3p 2L - 6678049 6678095 3'utr Nhe3 FlyBase G6412.1 AACATAAACTTATAGCTTTTTCGTTCTAAGCCAGTTAGTGTAAATAT 12 6678076 0.963675839 3 11 113 0.842105263 1.204119983 0 0.416666667 0.631578947 12 3 0 16 2L:6678049-6678095 7 13 642 FBgn0028703 495.63 20.01 30.39666667 0.026229244 0.649675162 0.427678474 -7 -7 -7 0.15 dme-miR-932-5p 6mer2-7 GAATTG 2L 6678682 6678687 - 2L_6678682_6678687_- 0.99531534 0.997964004 0.996639672 0.001872914 Nhe3 FBtr0273247|FBtr0273248|FBtr0273250 6677833|6677833|6677833 6679193|6678723|6678723 2L - 6678624 6678702 3'utr Nhe3 FlyBase G8247.2 CTTTTGTTATTTATTGAATTGGTCTCAACTGAAATCGAAAATGTGAAAACTGTACAAATTAGAATATTACTTTTCAGTT 259 6678684 0.724330692 19 240 2028 0.93015873 1.68871637 0.174603175 0.181467181 0.326984127 259 17 5 293 2L:6678624-6678702 6 Nhe3 FBtr0273250|FBtr0273247|FBtr0273248 6677833|6677833|6677833 6678723|6679193|6678723 GAATTG 6mer2-7 dme-miR-932-5p 2L - 6678630 6678709 3'utr Nhe3 FlyBase G6416.1 TAGTTTTCTTTTGTTATTTATTGAATTGGTCTCAACTGAAATCGAAAATGTGAAAACTGTACAAATTAGAATATTACTTT 182 6678684 0.722392589 16 177 1385 0.97080292 2.123851641 0.142335766 0.357142857 0.572992701 182 7 1 266 2L:6678630-6678709 6 159 643 FBgn0028703 495.63 20.01 30.39666667 0.320803825 7.946026987 5.230836715 -3 -3 -3 0.15 dme-miR-8-3p 6mer3-8 CAGTAT 2L 6679652 6679657 - 2L_6679652_6679657_- 0.999958342 0.999861056 0.999909699 6.87E-05 Nhe3 FBtr0333347 6679319 6679922 2L - 6679631 6679707 3'utr Nhe3 FlyBase G8249.1 AATGTTAAATTTTGTGGTATAAGCGGAAGTGATGGATAAGTTACACCCTTCAGTATGGTTGACTAATTGTTTAAGTT 21 6679658 0.793852309 9 18 171 0.869565217 1.301029996 0.173913043 0.095238095 0.173913043 21 3 0 20 2L:6679631-6679707 6 Nhe3 FBtr0333347 6679319 6679922 CAGTAT 6mer3-8 dme-miR-8-3p 2L - 6679637 6679671 3'utr Nhe3 FlyBase G6418.1 TAAGTTACACCCTTCAGTATGGTTGACTAATTGTT 22 6679659 0.795544405 5 21 166 0.967741935 1.477121255 0.258064516 0.318181818 0.516129032 22 1 0 30 2L:6679637-6679671 6 17.5 644 FBgn0028703 495.63 20.01 30.39666667 0.035308597 0.874562719 0.575721022 1 2 1.5 0.15 dme-miR-932-5p 6mer2-7 GAATTG 2L 6679758 6679763 - 2L_6679758_6679763_- 0.932765715 0.992850868 0.962808292 0.042486652 Nhe3 FBtr0333347 6679319 6679922 2L - 6679745 6679810 3'utr Nhe3 FlyBase G8250.1 TGAATCTACACCACAGAGACTTTGGCAAAGTAGACGTATTATTGTATGAATTGGCCGTGAAAATGT 59 6679759 0.790946292 8 59 311 1 1.875061263 0.08 0.237288136 0.4 59 0 0 75 2L:6679745-6679810 6 Nhe3 FBtr0333347 6679319 6679922 GAATTG 6mer2-7 dme-miR-932-5p 2L - 6679745 6679807 3'utr Nhe3 FlyBase G6419.1 ATCTACACCACAGAGACTTTGGCAAAGTAGACGTATTATTGTATGAATTGGCCGTGAAAATGT 36 6679759 0.750003471 7 35 176 1 1.662757832 0.065217391 0.25 0.413043478 36 0 0 46 2L:6679745-6679807 6 31 645 FBgn0028703 495.63 20.01 30.39666667 0.062546658 1.549225387 1.019848668 -4 -4 -4 0.15 dme-miR-14-3p 6mer3-8 AAGACT 2L 6679889 6679894 - 2L_6679889_6679894_- 0.571630371 0.671860534 0.621745452 0.070873383 Nhe3 FBtr0333347 6679319 6679922 2L - 6679854 6679929 stop_codon Nhe3 FlyBase G8251.1 TGAATAACCGAATGAGCGAAGCACCCCAGACACCAAAGACTAATCTAAGCGTAGCAAGCTGGCCACTAACAAAGAA 8 6679870 0.859293783 4 8 20 1 0.954242509 0.222222222 0.125 0.222222222 8 0 0 9 2L:6679854-6679929 6 Nhe3 FBtr0333347 6679319 6679922 AAGACT 6mer3-8 dme-miR-14-3p 2L - 6679859 6679915 3'utr Nhe3 FlyBase G6420.1 AGCGAAGCACCCCAGACACCAAAGACTAATCTAAGCGTAGCAAGCTGGCCACTAACA 7 6679886 0.770125506 4 6 12 1 1 0.2 0.428571429 0.6 7 0 0 10 2L:6679859-6679915 6 3.5 646 FBgn0028703 495.63 20.01 30.39666667 0.007061719 0.174912544 0.115144204 -24 -8 -16 0.15 dme-miR-318-3p 6mer3-8 CCCAGT 2L 6720349 6720354 - 2L_6720349_6720354_- 0.964135561 0.996182006 0.980158783 0.022660227 homer FBtr0329892|FBtr0333346|FBtr0079307 6719392|6719894|6719894 6721023|6721023|6721023 2L - 6720304 6720370 3'utr homer FlyBase G8262.1 TGAATGTATACCTATGCCCAGTATTTCGTCAAAATTCTTCGAGTCCTTGTGACACTGATGTAGGTCC 15 6720356 0.984437746 7 15 121 1 1.278753601 0 0.2 0.368421053 15 0 0 19 2L:6720304-6720370 6 homer FBtr0079307|FBtr0333346|FBtr0329892 6719894|6719894|6719392 6721023|6721023|6721023 CCCAGT 6mer3-8 dme-miR-318-3p 2L - 6720306 6720372 3'utr homer FlyBase G6429.1 ATTGAATGTATACCTATGCCCAGTATTTCGTCAAAATTCTTCGAGTCCTTGTGACACTGATGTAGGT 11 6720357 0.985145773 7 11 95 1 1.322219295 0 0.545454545 0.761904762 11 0 0 21 2L:6720306-6720372 6 10 647 FBgn0025777 829.61 37.73333333 57.58 0.012053857 0.265017668 0.173671414 2 3 2.5 0.15 dme-miR-92b-3p 7mer-A1 TGCAATA 2L 6731159 6731165 + 2L_6731159_6731165_+ 0.748958327 0.391402335 0.570180331 0.252830272 Liprin-alpha FBtr0329942|FBtr0079301|FBtr0329943|FBtr0329941|FBtr0079300 6730687|6730687|6730726|6730687|6730687 6731600|6731600|6731345|6732766|6731345 2L + 6731140 6731235 3'utr Liprin-alpha FlyBase G2561.1 TATATAGTGTAATTGGGCTTGCAATAGACTAACAGTATTTTGTTTTAGATGATGCAGAGGTGGAAAGAGATGACAGCGTGCTTCGAACCAAATTCG 45 6731164 0.95946612 12 42 288 0.947368421 1.431363764 0.333333333 0.222222222 0.385964912 45 2 1 54 2L:6731140-6731235 7 Liprin-alpha FBtr0329942|FBtr0079300|FBtr0329941|FBtr0329943|FBtr0079301 6730687|6730687|6730687|6730726|6730687 6731600|6731345|6732766|6731345|6731600 TGCAATA 7mer-A1 dme-miR-92b-3p 2L + 6731138 6731194 3'utr Liprin-alpha FlyBase G2021.1 TTTATATAGTGTAATTGGGCTTGCAATAGACTAACAGTATTTTGTTTTAGATGATGC 35 6731164 0.797664604 9 35 259 1 1.716003344 0.346153846 0.4 0.596153846 35 0 0 52 2L:6731138-6731194 7 33 648 FBgn0046704 1858.986667 39.04 59.95333333 0.017751607 0.845286885 0.550428111 -5 -5 -5 0.15 dme-miR-252-5p 7mer-m8 GTACTTA 2L 6731985 6731991 + 2L_6731985_6731991_+ 0.583487836 0.58438175 0.583934793 0.000632083 Liprin-alpha FBtr0329941 6730687 6732766 2L + 6731974 6732012 3'utr Liprin-alpha FlyBase G2564.1 AAGTTTTGCATGTACTTACTTTCCCTTTATACGTTAAAG 15 6731984 0.930055824 2 15 169 1 1.230448921 0.058823529 0.133333333 0.235294118 15 0 0 17 2L:6731974-6732012 7 Liprin-alpha FBtr0329941 6730687 6732766 GTACTTA 7mer-m8 dme-miR-252-5p 2L + 6731971 6732008 3'utr Liprin-alpha FlyBase G2023.1 TTTAAGTTTTGCATGTACTTACTTTCCCTTTATACGTT 15 6731984 0.811510161 3 14 165 0.9 1.255272505 0 0.266666667 0.45 15 2 0 18 2L:6731971-6732008 7 15 649 FBgn0046704 1858.986667 39.04 59.95333333 0.008068912 0.384221311 0.250194596 1 1 1 0.15 dme-miR-965-3p 6mer2-7 ACGCTT 2L 6732131 6732136 + 2L_6732131_6732136_+ 0.999998969 0.992685877 0.996342423 0.005171143 Liprin-alpha FBtr0329941 6730687 6732766 2L + 6732103 6732144 3'utr Liprin-alpha FlyBase G2565.1 TGTGTACAAAAAACCAAAATTGCAACTAACGCTTGTCCTTAA 6 6732128 0.984046085 4 5 41 0.857142857 0.77815125 0.285714286 0.166666667 0.285714286 6 1 0 6 2L:6732103-6732144 6 Liprin-alpha FBtr0329941 6730687 6732766 ACGCTT 6mer2-7 dme-miR-965-3p 2L + 6732117 6732148 3'utr Liprin-alpha FlyBase G2024.1 CAAAATTGCAACTAACGCTTGTCCTTAAGTTG 5 6732129 0.896368235 2 5 36 1 0.903089987 0.125 0.4 0.625 5 0 0 8 2L:6732117-6732148 6 5.5 650 FBgn0046704 1858.986667 39.04 59.95333333 0.002958601 0.140881148 0.091738018 3 2 2.5 0.15 dme-bantam-3p 6mer3-8 TGATCT 2L 6778791 6778796 - 2L_6778791_6778796_- 0.999199798 0.999617446 0.999408622 0.000295288 nrv1 FBtr0079384 6778553 6779372 2L - 6778772 6778815 3'utr nrv1 FlyBase G8266.1 CATGGAGAACGAAACATTTTGATCTAAGCTGAATGTCGATTATT 41 6778797 0.656066173 7 38 280 0.936170213 1.643452676 0.234042553 0.12195122 0.234042553 41 3 0 44 2L:6778772-6778815 6 nrv1 FBtr0079384 6778553 6779372 TGATCT 6mer3-8 dme-bantam-3p 2L - 6778772 6778814 3'utr nrv1 FlyBase G6432.1 ATGGAGAACGAAACATTTTGATCTAAGCTGAATGTCGATTATT 32 6778797 0.633711496 8 30 216 0.923076923 1.681241237 0.307692308 0.53125 0.711538462 32 4 0 48 2L:6778772-6778814 6 36 651 FBgn0015776 3384.113333 195.7933333 300.12 0.010637942 0.183867343 0.119952019 1 1 1 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 2L 6778857 6778863 - 2L_6778857_6778863_- 0.782858928 0.782880517 0.782869722 1.53E-05 nrv1 FBtr0332370|FBtr0079384 6778822|6778553 6779372|6779372 2L - 6778837 6778966 3'utr nrv1 FlyBase G8267.1 GATCATTATTTTCTGTCAGTTGTATTTAGTTTTAATTTATAAATGTTGAAACATGCCCGAAAAATTCTTTGTTTCCCGCACATCGCCTAGGCTTGTTCAATTTGTACAAAGAAGCAACTAAATAAATTAT 76 6778865 0.994659181 15 75 482 0.989583333 1.977723605 0.354166667 0.210526316 0.375 76 1 0 95 2L:6778837-6778966 7 nrv1 FBtr0332370|FBtr0079384 6778822|6778553 6779372|6779372 GTACAAA 7mer-A1 dme-miR-305-5p 2L - 6778844 6778927 3'utr nrv1 FlyBase G6433.1 TAAATGTTGAAACATGCCCGAAAAATTCTTTGTTTCCCGCACATCGCCTAGGCTTGTTCAATTTGTACAAAGAAGCAACTAAAT 59 6778865 0.987244447 7 58 353 0.9875 1.897627091 0.1875 0.271186441 0.4625 59 1 0 79 2L:6778844-6778927 7 34.5 652 FBgn0015776 3384.113333 195.7933333 300.12 0.010194694 0.176206204 0.114954018 2 2 2 0.15 dme-miR-79-3p 7mer-m8 TAGCTTT 2L 6779040 6779046 - 2L_6779040_6779046_- 0.611530544 0.424066829 0.517798686 0.132556853 nrv1 FBtr0332370|FBtr0079384 6778822|6778553 6779372|6779372 2L - 6779030 6779141 3'utr nrv1 FlyBase G8268.1 CGTCAATTGAACTCTGAACATCTGGCCTAATAGAGAAATAGAAAGTCGAAAATCTTGAAATTAAAGTTCAAATCGTACACACGCAATTGTTGTTATAGCTTTTAGCTTGTCT 53 6779055 0.838812859 19 51 412 0.967213115 1.469822016 0.147540984 0.113207547 0.229508197 53 1 1 59 2L:6779030-6779141 7 nrv1 FBtr0332370|FBtr0079384 6778822|6778553 6779372|6779372 TAGCTTT 7mer-m8 dme-miR-79-3p 2L - 6778988 6779162 3'utr nrv1 FlyBase G6434.1 CGAAGGAATGATCCGACCGATCGTCAATTGAACTCTGAACATCTGGCCTAATAGAGAAATAGAAAGTCGAAAATCTTGAAATTAAAGTTCAAATCGTACACACGCAATTGTTGTTATAGCTTTTAGCTTGTCTATTGCTATCAGTTATTATTATTAATATTTATCATATTATTTC 36 6779055 0.983199472 18 35 305 1 1.707570176 0.196078431 0.361111111 0.549019608 36 0 0 51 2L:6778988-6779162 7 19.5 653 FBgn0015776 3384.113333 195.7933333 300.12 0.005762218 0.099594811 0.06497401 9 9 9 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2L 6779337 6779342 - 2L_6779337_6779342_- 0.944737514 0.943515849 0.944126682 0.000863872 nrv1 FBtr0332370|FBtr0332370|FBtr0332370|FBtr0079384|FBtr0079384|FBtr0079384 6778822|6778822|6778822|6778553|6778553|6778553 6779372|6779372|6779372|6779372|6779372|6779372 2L - 6779330 6779434 stop_codon nrv1 FlyBase G8269.3 AGTACAGTGGCAGTGTCCGCGATCGCAAGGGCTCCGTGACCTTCCAGATCCTCCTGGACTAAGTGCGGGGAATGGGAATCATGTCGCCAACTTGTGATCGCAGCA 451 6779343 0.948859175 12 397 2243 0.880067568 1.06362521 0.170608108 0.241685144 0.422297297 451 27 44 521 2L:6779330-6779434 6 nrv1 FBtr0332370|FBtr0332370|FBtr0332370|FBtr0079384|FBtr0079384|FBtr0079384 6778822|6778822|6778822|6778553|6778553|6778553 6779372|6779372|6779372|6779372|6779372|6779372 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 6779330 6779371 3'utr nrv1 FlyBase G6435.2 TGCGGGGAATGGGAATCATGTCGCCAACTTGTGATCGCAGCA 323 6779343 0.774536091 5 286 1619 0.87755102 1 0.16122449 0.359133127 0.57755102 323 18 42 430 2L:6779330-6779371 6 377.5 654 FBgn0015776 3384.113333 195.7933333 300.12 0.111550638 1.92805339 1.257830201 1 1 1 0.15 dme-miR-305-5p 8mer-A1 AGTACAAA 2L 6906875 6906882 - 2L_6906875_6906882_- 0.604773642 0.605489384 0.605131513 0.000506147 CG13773 FBtr0079372 6906664 6906917 2L - 6906862 6906910 3'utr CG13773 FlyBase G8287.1 ACCTTTCGTTTTTAACATCTCTGTATATAGTACAAATTAACAATTACAT 46 6906885 0.781638653 6 45 438 0.980392157 1.397940009 0.098039216 0.086956522 0.176470588 46 0 1 50 2L:6906862-6906910 8 CG13773 FBtr0079372 6906664 6906917 AGTACAAA 8mer-A1 dme-miR-305-5p 2L - 6906870 6906908 3'utr CG13773 FlyBase G6451.1 CTTTCGTTTTTAACATCTCTGTATATAGTACAAATTAAC 14 6906885 0.726582326 5 12 129 0.909090909 1 0 0.428571429 0.636363636 14 1 1 20 2L:6906870-6906908 8 30 655 FBgn0042092 166.9866667 19.41666667 29.97666667 0.179655062 1.545064378 1.000778383 3 3 3 0.15 dme-miR-8-3p 6mer2-7 AGTATT 2L 6911429 6911434 - 2L_6911429_6911434_- 1 1 1 0 Wee1 FBtr0332329|FBtr0079371 6911088|6911341 6911700|6911700 2L - 6911390 6911465 3'utr Wee1 FlyBase G8291.1 TAAACTTTAAGATTCTCGCATAGTTGTAATGAGTATTGTTTTCGAAATTAAAATATTTATTATGTTACATGGAAAT 11 6911432 0.986513279 8 11 96 1 1.176091259 0.133333333 0.272727273 0.466666667 11 0 0 15 2L:6911390-6911465 6 Wee1 FBtr0332329|FBtr0079371 6911088|6911341 6911700|6911700 AGTATT 6mer2-7 dme-miR-8-3p 2L - 6911413 6911448 3'utr Wee1 FlyBase G6455.1 GCATAGTTGTAATGAGTATTGTTTTCGAAATTAAAA 7 6911429 0.951315344 4 6 62 1 1 0.2 0.428571429 0.6 7 0 0 10 2L:6911413-6911448 6 6 656 FBgn0011737 492.04 24.44666667 37.58666667 0.012194131 0.245432233 0.159631075 -2 -5 -3.5 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 2L 6911628 6911633 - 2L_6911628_6911633_- 0.999679846 0.999719975 0.99969991 2.84E-05 Wee1 FBtr0332329|FBtr0079371 6911088|6911341 6911700|6911700 2L - 6911609 6911700 3'utr Wee1 FlyBase G8293.1 TAAGCTCGCAACAGATGCCGAACCGATAGCTAAACTCTTCCGAATCGAACGTGAACTAAGCTCACATTGTGTTACCTTTTAAGCGTATTCAT 95 6911633 0.98104352 11 93 633 0.98245614 2.049218023 0.140350877 0.178947368 0.315789474 95 2 0 112 2L:6911609-6911700 6 Wee1 FBtr0332329|FBtr0079371 6911088|6911341 6911700|6911700 TGTGTT 6mer3-8 dme-miR-317-3p 2L - 6911608 6911708 stop_codon Wee1 FlyBase G6456.1 ATATCTGATAAGCTCGCAACAGATGCCGAACCGATAGCTAAACTCTTCCGAATCGAACGTGAACTAAGCTCACATTGTGTTACCTTTTAAGCGTATTCATA 53 6911634 0.962293907 9 52 361 0.977272727 1.934498451 0.284090909 0.433962264 0.659090909 53 2 0 86 2L:6911608-6911708 6 43.5 657 FBgn0011737 492.04 24.44666667 37.58666667 0.088407447 1.779383692 1.157325293 0 1 0.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 6914654 6914661 - 2L_6914654_6914661_- 0.631136494 0.63112699 0.631131742 6.72E-06 x16 FBtr0079368|FBtr0332328 6914379|6914299 6915042|6915042 2L - 6914548 6914677 3'utr x16 FlyBase G8311.1 AGCCGCAGATTAACGATCTAGTCAGGATTGCTATGTAAATTGATTTGCCTTGGATTTTATTTTGCTTACCCTGGAATTATACTCGAATGTGCAGAGGACGAAGCATCGCCACCATTTTCATGTCAATTTT 31 6914661 0.934813068 10 29 222 0.941176471 1.204119983 0.205882353 0.096774194 0.176470588 31 1 1 32 2L:6914548-6914677 8 x16 FBtr0079368|FBtr0332328 6914379|6914299 6915042|6915042 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 6914622 6914703 3'utr x16 FlyBase G6467.1 AATTTAAGATATAGAAATGTATCGGCAGCCGCAGATTAACGATCTAGTCAGGATTGCTATGTAAATTGATTTGCCTTGGATT 28 6914667 0.972373818 9 27 162 0.977272727 1.633468456 0.318181818 0.464285714 0.659090909 28 1 0 43 2L:6914622-6914703 8 21 658 FBgn0028554 1073.163333 75.76666667 116.1166667 0.019568317 0.27716674 0.180852591 0 6 3 0.15 dme-miR-980-5p 7mer-m1 AAAAACT 2L 6926732 6926738 + 2L_6926732_6926738_+ 0.697166848 0.657299464 0.677233156 0.028190438 Hrb27C FBtr0307032|FBtr0079346|FBtr0307031|FBtr0307030 6925454|6925454|6925454|6925454 6932057|6926806|6926806|6928675 2L + 6926693 6926802 3'utr Hrb27C FlyBase G2636.2 TATGGAAACCAACAAAACACACTCTTAACCAATATACATAAAAACTATAAACATACTTATAAACAATATATATATATATATATTTAAAGCGAGTATATATATATAAAAGG 57 6926725 0.812491577 12 49 292 0.928571429 1.511883361 0.042857143 0.140350877 0.3 57 4 1 65 2L:6926693-6926802 7 Hrb27C FBtr0307030|FBtr0079346|FBtr0307031|FBtr0307032 6925454|6925454|6925454|6925454 6928675|6926806|6926806|6932057 AAAAACT 7mer-m1 dme-miR-980-5p 2L + 6926628 6926744 3'utr Hrb27C FlyBase G2077.1 TATTTAGTTAAAGCGAAATGAAAGAGCCAAGCAGCAGCAGCATGATAATGATTGATTATAATGGATATGGAAACCAACAAAACACACTCTTAACCAATATACATAAAAACTATAAAC 63 6926725 0.988588256 13 59 271 0.964705882 1.913813852 0.211764706 0.317460317 0.494117647 63 3 0 82 2L:6926628-6926744 7 29.5 659 FBgn0004838 17779.86667 540.8 834.9466667 0.00165918 0.054548817 0.035331598 7 7 7 0.15 dme-miR-317-3p 6mer2-7 GTGTTC 2L 6927649 6927654 + 2L_6927649_6927654_+ 0.650935796 0.533177024 0.59205641 0.083268046 Hrb27C FBtr0307032|FBtr0307030 6925454|6925454 6932057|6928675 2L + 6927607 6927840 3'utr Hrb27C FlyBase G2640.2 AATACAAATACTTTACTTTATTTTTCGGTGATTTATTGCTTAGTGTTCTTCGTATAATTTGTACTCTACTACAACAAAACAAATCCTACAGTTATAAATTCCTAATTTAATTTTGTTTAAATTACAAATACATATGCTTACATTTTATAACTAATTATACAATTTTTAAAAAATACCAACACAAAACAAAAGCAAAAGCGCTAAAACAATGAGTAAACAAGTAAAGTAAACGTG 451 6927639 0.987752877 40 428 5423 0.952117864 1.759248034 0.303867403 0.179600887 0.318600368 451 18 8 517 2L:6927607-6927840 6 Hrb27C FBtr0307030|FBtr0307032 6925454|6925454 6928675|6932057 GTGTTC 6mer2-7 dme-miR-317-3p 2L + 6927516 6927700 3'utr Hrb27C FlyBase G2081.1 AATTTTTTCTATTAAAGTACCATACACTAATTTTTAATTTGTTTATTTACAACAAATCAACTTACAATACATACATTTAATTACAATATACAATACAAATACTTTACTTTATTTTTCGGTGATTTATTGCTTAGTGTTCTTCGTATAATTTGTACTCTACTACAACAAAACAAATCCTACAGTTA 291 6927639 0.993927397 36 278 3552 0.960556845 2.315970345 0.236658933 0.343642612 0.556844548 291 16 1 414 2L:6927516-6927700 6 180.5 660 FBgn0004838 17779.86667 540.8 834.9466667 0.010151932 0.333764793 0.216181473 10 10 10 0.15 dme-miR-305-5p 7mer-m1 GTACAAT 2L 6943798 6943804 - 2L_6943798_6943804_- 0.68598903 0.765586663 0.725787846 0.056284073 Fgop2 FBtr0079366|FBtr0332325 6943738|6943176 6944048|6944048 2L - 6943777 6943815 3'utr Fgop2 FlyBase G8331.1 ACAAATGTAATGTACAATGTACCCTGTCGATTTTATGGT 7 6943798 0.763987188 3 7 50 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 2L:6943777-6943815 7 Fgop2 FBtr0332325|FBtr0079366 6943176|6943738 6944048|6944048 GTACAAT 7mer-m1 dme-miR-305-5p 2L - 6943774 6943813 3'utr Fgop2 FlyBase G6484.1 AAATGTAATGTACAATGTACCCTGTCGATTTTATGGTTTG 6 6943798 0.970309138 4 6 40 1 0.903089987 0 0.166666667 0.375 6 0 0 8 2L:6943774-6943813 7 6.5 661 FBgn0031871 525 42.17 64.62333333 0.012380952 0.154138013 0.100582865 -6 -6 -6 0.15 dme-miR-277-3p 6mer3-8 TGCATT 2L 6943939 6943944 - 2L_6943939_6943944_- 0.999082503 0.999999411 0.999540957 0.000648346 Fgop2 FBtr0079366|FBtr0332325 6943738|6943176 6944048|6944048 2L - 6943899 6943968 3'utr Fgop2 FlyBase G8332.1 CGCACGAAGAGGGCCCACATAACCTGCATTAGCTCTTAGCGATTGATAATCTCTAAGTAATTTATACATA 19 6943949 0.961067937 6 18 96 0.92 1.361727836 0.28 0.263157895 0.44 19 2 0 23 2L:6943899-6943968 6 Fgop2 FBtr0332325|FBtr0079366 6943176|6943738 6944048|6944048 TGCATT 6mer3-8 dme-miR-277-3p 2L - 6943911 6943963 3'utr Fgop2 FlyBase G6485.1 GAAGAGGGCCCACATAACCTGCATTAGCTCTTAGCGATTGATAATCTCTAAGT 13 6943940 0.974597509 3 12 79 0.882352941 1.176091259 0.176470588 0.230769231 0.411764706 13 2 0 15 2L:6943911-6943963 6 14.5 662 FBgn0031871 525 42.17 64.62333333 0.027619048 0.343846336 0.22437716 5 -4 0.5 0.15 dme-miR-276a-3p 6mer2-7 GTTCCT 2L 6954423 6954428 - 2L_6954423_6954428_- 0.49774798 0.530479922 0.514113951 0.023144948 CG13775 FBtr0343775 6954355 6954584 2L - 6954402 6954442 3'utr CG13775 FlyBase G8347.1 ATCAGGATCATTGTGTTCCTCTTCGTCTTCCTCCTCCTCCT 10 6954432 0.79288534 2 10 100 1 1.113943352 0 0.2 0.384615385 10 0 0 13 2L:6954402-6954442 6 CG13775 FBtr0343775 6954355 6954584 GTTCCT 6mer2-7 dme-miR-276a-3p 2L - 6954402 6954442 3'utr CG13775 FlyBase G6497.1 ATCAGGATCATTGTGTTCCTCTTCGTCTTCCTCCTCCTCCT 9 6954432 0.799558189 3 9 101 1 1.079181246 0 0.333333333 0.5 9 0 0 12 2L:6954402-6954442 6 9.5 663 FBgn0031874 57.8 3.896666667 5.98 0.164359862 2.43798118 1.588628763 4 4 4 0.15 dme-miR-31a-5p 6mer2-7 CTTGCC 2L 6959136 6959141 - 2L_6959136_6959141_- 0.999456874 0.986733566 0.99309522 0.008996732 Atac1 FBtr0079362 6959097 6959182 2L - 6959117 6959164 3'utr Atac1 FlyBase G8351.1 TACTTGAGTACTAAATTACTAGACTTGCCTGTAAAGCTACAAATTAAA 30 6959145 0.761542278 10 27 207 0.916666667 1.217483944 0.166666667 0.2 0.333333333 30 2 1 33 2L:6959117-6959164 6 Atac1 FBtr0079362 6959097 6959182 CTTGCC 6mer2-7 dme-miR-31a-5p 2L - 6959107 6959159 3'utr Atac1 FlyBase G6500.1 GAGTACTAAATTACTAGACTTGCCTGTAAAGCTACAAATTAAATATAAAGAGA 15 6959146 0.824867079 4 12 99 0.842105263 0.903089987 0.263157895 0.2 0.368421053 15 2 1 16 2L:6959107-6959159 6 21 664 FBgn0031876 128 12.98 19.96333333 0.1640625 1.617873652 1.051928536 4 5 4.5 0.15 dme-miR-305-5p 7mer-m8 AGTACAA 2L 6966868 6966874 - 2L_6966868_6966874_- 0.643260984 0.643255667 0.643258325 3.75E-06 smt3 FBtr0079356|FBtr0346716 6966778|6966778 6967027|6967027 2L - 6966844 6966944 3'utr smt3 FlyBase G8372.2 CAAAAACACAACAACAACAACATGAAGAATCCAACAAACCAGGCCCTAAGAATCGATTGAATATGCTTTTAGTACAACTGTAGATTCTAAATGCGTCTGTG 79 6966876 0.987768481 17 75 701 0.955555556 1.633468456 0.177777778 0.139240506 0.244444444 79 3 1 86 2L:6966844-6966944 7 smt3 FBtr0079356|FBtr0346716 6966778|6966778 6967027|6967027 AGTACAA 7mer-m8 dme-miR-305-5p 2L - 6966850 6966944 3'utr smt3 FlyBase G6514.2 CAAAAACACAACAACAACAACATGAAGAATCCAACAAACCAGGCCCTAAGAATCGATTGAATATGCTTTTAGTACAACTGTAGATTCTAAATGCG 50 6966876 0.984249376 13 47 386 0.948051948 1.86332286 0.337662338 0.34 0.571428571 50 4 0 73 2L:6966850-6966944 7 55 665 FBgn0264922 12150.86667 2306.473333 3557.52 0.004526426 0.023845929 0.015460208 2 2 2 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 2L 7030904 7030909 - 2L_7030904_7030909_- 0.998775869 0.998948865 0.998862367 0.000122329 Rab30 FBtr0079428|FBtr0079426|FBtr0079427 7030491|7030491|7030491 7031433|7031433|7031433 2L - 7030883 7030956 3'utr Rab30 FlyBase G8407.1 AGATCCTATGGGAAACTAGCTGTCAATGACTAAGGATGCTAAATATTTGTGTTACAAGAACTCCATTGGAGGTG 90 7030911 0.821874347 9 83 693 0.935185185 1.703291378 0.333333333 0.177777778 0.314814815 90 6 1 101 2L:7030883-7030956 6 Rab30 FBtr0079427|FBtr0079426|FBtr0079428 7030491|7030491|7030491 7031433|7031433|7031433 TGTGTT 6mer3-8 dme-miR-317-3p 2L - 7030823 7030956 3'utr Rab30 FlyBase G6535.2 AGATCCTATGGGAAACTAGCTGTCAATGACTAAGGATGCTAAATATTTGTGTTACAAGAACTCCATTGGAGGTGTTTAAGACCGCCTGATTTTCTTGATTTGTATTATATAGACGTATGTATTGATCTGATTAT 83 7030911 0.946101567 15 79 662 0.959677419 2.075546961 0.403225806 0.313253012 0.540322581 83 5 0 119 2L:7030823-7030956 6 67 666 FBgn0031882 194.3333333 12.53666667 18.90666667 0.344768439 5.344323318 3.543723554 2 2 2 0.15 dme-miR-980-3p 7mer-A1 GCAGCTA 2L 7031105 7031111 - 2L_7031105_7031111_- 0.823162795 0.823303831 0.823233313 9.97E-05 Rab30 FBtr0079428|FBtr0079426|FBtr0079427 7030491|7030491|7030491 7031433|7031433|7031433 2L - 7031079 7031152 3'utr Rab30 FlyBase G8408.2 AAACATTTAAAGTACAATGTGCAAACGGATCTGGAAACTGTGCAGCTAATCTGTTATCTGTTATCGTGATATTC 73 7031114 0.86851819 15 57 442 0.846153846 1.40936947 0.230769231 0.164383562 0.32967033 73 12 2 77 2L:7031079-7031152 7 Rab30 FBtr0079427|FBtr0079426|FBtr0079428 7030491|7030491|7030491 7031433|7031433|7031433 GCAGCTA 7mer-A1 dme-miR-980-3p 2L - 7031083 7031201 3'utr Rab30 FlyBase G6536.2 AAGGTATTTAGAGCAATTCTCTTCGCTTTCACTAAACTACGATAACAACAAACATTTAAAGTACAATGTGCAAACGGATCTGGAAACTGTGCAGCTAATCTGTTATCTGTTATCGTGAT 68 7031114 0.85457327 18 59 422 0.909090909 1.653212514 0.151515152 0.323529412 0.535353535 68 8 1 90 2L:7031083-7031201 7 40.5 667 FBgn0031882 194.3333333 12.53666667 18.90666667 0.208404803 3.230523797 2.142101551 3 3 3 0.15 dme-miR-283-5p 7mer-m8 TGATATT 2L 7031367 7031373 - 2L_7031367_7031373_- 0.619573724 0.620201229 0.619887477 0.00044371 Rab30 FBtr0079428|FBtr0079426|FBtr0079427 7030491|7030491|7030491 7031433|7031433|7031433 2L - 7031326 7031486 stop_codon Rab30 FlyBase G8410.1 ATTGCTGTGGCGGACTCGCCAGCGGCGGCTCCAACTCTAGTCAAGGCGGCTGAGCAGCTGCAAACTGAACTGGAAGCTGAGCAGCTAATCTGTAACTTGTTAAGGACTAATCGTGATATTCCATTTATCTTTTATTACCACAATGCTCCCACATTCTAACA 131 7031377 0.96686346 20 125 697 0.951219512 1.716003344 0.158536585 0.183206107 0.347560976 131 6 2 156 2L:7031326-7031486 7 Rab30 FBtr0079427|FBtr0079426|FBtr0079428 7030491|7030491|7030491 7031433|7031433|7031433 TGATATT 7mer-m8 dme-miR-283-5p 2L - 7031349 7031507 stop_codon Rab30 FlyBase G6538.1 GTGCCAAGGCAGCGCAGAGCAATTGCTGTGGCGGACTCGCCAGCGGCGGCTCCAACTCTAGTCAAGGCGGCTGAGCAGCTGCAAACTGAACTGGAAGCTGAGCAGCTAATCTGTAACTTGTTAAGGACTAATCGTGATATTCCATTTATCTTTTATTAC 119 7031377 0.971845675 18 109 631 0.891752577 1.459894853 0.12371134 0.428571429 0.649484536 119 16 5 173 2L:7031349-7031507 7 58.5 668 FBgn0031882 194.3333333 12.53666667 18.90666667 0.30102916 4.666312151 3.094146685 4 4 4 0.15 dme-bantam-3p 6mer3-8 TGATCT 2L 7034833 7034838 + 2L_7034833_7034838_+ 0.999999861 0.99999122 0.999995541 6.15E-06 Caper FBtr0344708|FBtr0344712|FBtr0344709|FBtr0344711 7034209|7034497|7034209|7034497 7037613|7037613|7037613|7037878 2L + 7034813 7034842 5'utr Caper FlyBase G2689.1 GCTAAACATTCCCCCAAAACTGATCTGATT 6 7034833 0.755958728 3 6 27 1 0.903089987 0.25 0.333333333 0.5 6 0 0 8 2L:7034813-7034842 6 Caper FBtr0344711|FBtr0344709|FBtr0344712|FBtr0344708 7034497|7034209|7034497|7034209 7037878|7037613|7037613|7037613 TGATCT 6mer3-8 dme-bantam-3p 2L + 7034810 7034849 5'utr Caper FlyBase G2118.1 AGCGCTAAACATTCCCCCAAAACTGATCTGATTGAGAATG 8 7034841 0.889066532 3 8 39 1 1.041392685 0.727272727 0.375 0.545454545 8 0 0 11 2L:7034810-7034849 6 6.5 669 FBgn0031883 799.28 33.26666667 50.99666667 0.008132319 0.195390782 0.127459311 0 -8 -4 0.15 dme-miR-11-3p 7mer-m1 TGTGATG 2L 7054713 7054719 + 2L_7054713_7054719_+ 0.609652219 0.611371521 0.61051187 0.001215729 milt FBtr0306230|FBtr0306228|FBtr0306231|FBtr0306232|FBtr0306233|FBtr0306229 7054555|7054555|7054555|7054555|7054555|7054555 7054847|7054847|7056010|7054847|7056010|7056010 2L + 7054673 7054729 5'utr milt FlyBase G2717.1 TACGCGAGAACAAGTTGAATAACGAAACGTAATGTAATCGTGTGATGAACGTTTAGT 14 7054688 0.968250832 9 13 69 0.933333333 1.146128036 0.2 0.071428571 0.133333333 14 1 0 14 2L:7054673-7054729 7 milt FBtr0306233|FBtr0306229|FBtr0306230|FBtr0306228|FBtr0306231|FBtr0306232 7054555|7054555|7054555|7054555|7054555|7054555 7056010|7056010|7054847|7054847|7056010|7054847 TGTGATG 7mer-m1 dme-miR-11-3p 2L + 7054668 7054738 5'utr milt FlyBase G2144.1 AGCACTACGCGAGAACAAGTTGAATAACGAAACGTAATGTAATCGTGTGATGAACGTTTAGTTTAATTTTT 14 7054688 0.967299234 9 14 77 1 1.431363764 0.333333333 0.5 0.740740741 14 0 0 27 2L:7054668-7054738 7 8.5 670 FBgn0262872 1801.88 44.2 67.81666667 0.004717295 0.192307692 0.125337921 25 25 25 0.15 dme-miR-1008-3p 8mer-A1 AGCTGTGA 2L 7054811 7054818 + 2L_7054811_7054818_+ 0.459159657 0.489933645 0.474546651 0.021760433 milt FBtr0306230|FBtr0306228|FBtr0306231|FBtr0306232|FBtr0306233|FBtr0306229 7054555|7054555|7054555|7054555|7054555|7054555 7054847|7054847|7056010|7054847|7056010|7056010 2L + 7054738 7054884 5'utr-coding milt FlyBase G2718.1 TCTGTTTAATACCCCGCATAATGCCTGTCATCGCCACCTTAAGCAACACTGGAAAGAAGGTTTTAGTGTTTGTAGCTGTGATTTGTAAATACATATATAGAGAAATGTTTAAATTTAGTAGTTATTAATCGAGTACTTCGCATATTA 603 7054820 0.84434385 30 565 5992 0.936528497 1.95604831 0.325129534 0.225538972 0.39507772 603 42 7 723 2L:7054738-7054884 8 milt FBtr0306233|FBtr0306229|FBtr0306230|FBtr0306228|FBtr0306231|FBtr0306232 7054555|7054555|7054555|7054555|7054555|7054555 7056010|7056010|7054847|7054847|7056010|7054847 AGCTGTGA 8mer-A1 dme-miR-1008-3p 2L + 7054741 7054867 5'utr-coding milt FlyBase G2145.1 GTTTAATACCCCGCATAATGCCTGTCATCGCCACCTTAAGCAACACTGGAAAGAAGGTTTTAGTGTTTGTAGCTGTGATTTGTAAATACATATATAGAGAAATGTTTAAATTTAGTAGTTATTAATC 451 7054820 0.872320436 28 417 4539 0.935714286 1.774848615 0.312857143 0.399113082 0.612857143 451 35 10 655 2L:7054741-7054867 8 456 671 FBgn0262872 1801.88 44.2 67.81666667 0.253069017 10.31674208 6.724010813 -9 -9 -9 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 2L 7055019 7055024 + 2L_7055019_7055024_+ 0.743391167 0.997545914 0.870468541 0.179714512 milt FBtr0306231|FBtr0306233|FBtr0306229 7054555|7054555|7054555 7056010|7056010|7056010 2L + 7054991 7055031 3'utr milt FlyBase G2721.1 ATTTTGCCAATTTTGTATTTATTTTCCCTGTGTTTATTACC 19 7055003 0.763425606 9 19 248 1 1.322219295 0.047619048 0.105263158 0.19047619 19 0 0 21 2L:7054991-7055031 6 milt FBtr0306233|FBtr0306229|FBtr0306231 7054555|7054555|7054555 7056010|7056010|7056010 TGTGTT 6mer3-8 dme-miR-317-3p 2L + 7054946 7055030 3'utr milt FlyBase G2146.1 ATAGAGAAACCGAGTTCCAAAGCAGCTATTTTTAATTTAAACTACATTTTGCCAATTTTGTATTTATTTTCCCTGTGTTTATTAC 22 7055002 0.990666913 13 21 229 0.926829268 1.579783597 0.024390244 0.727272727 0.853658537 22 3 0 38 2L:7054946-7055030 6 7 672 FBgn0262872 1801.88 44.2 67.81666667 0.003884831 0.158371041 0.103219464 16 17 16.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2L 7055393 7055399 + 2L_7055393_7055399_+ 0.661606895 0.661613742 0.661610318 4.81E-06 milt FBtr0306231|FBtr0306233|FBtr0306229 7054555|7054555|7054555 7056010|7056010|7056010 2L + 7055363 7055433 3'utr milt FlyBase G2724.1 ACATAAATTATAGCGAAAAACGATTATTTTTCTAGTCCTACACTGGGTGGGTGCTCGTTTGGCTATGCAGA 73 7055392 0.848475309 11 70 658 0.964285714 1.908485019 0.095238095 0.095890411 0.214285714 73 3 0 81 2L:7055363-7055433 7 milt FBtr0306233|FBtr0306229|FBtr0306231 7054555|7054555|7054555 7056010|7056010|7056010 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2L + 7055372 7055428 3'utr milt FlyBase G2149.1 ATAGCGAAAAACGATTATTTTTCTAGTCCTACACTGGGTGGGTGCTCGTTTGGCTAT 38 7055392 0.609120628 6 37 350 0.962264151 1.707570176 0.056603774 0.342105263 0.528301887 38 2 0 51 2L:7055372-7055428 7 49.5 673 FBgn0262872 1801.88 44.2 67.81666667 0.027471308 1.119909502 0.729909069 1 1 1 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 2L 7062286 7062291 + 2L_7062286_7062291_+ 0.999999987 0.999988963 0.999994475 7.78E-06 Mnn1 FBtr0079401|FBtr0110978 7061720|7061720 7062665|7063586 2L + 7062227 7062303 3'utr Mnn1 FlyBase G2734.1 ATTTATGATGTATTTTTAGCTGTTATACTTTATCCCCTATGTATTTATTGCTACAACTATGTGTTTTCCCCTCAAGC 16 7062287 0.987224303 7 16 142 1 1.278753601 0.157894737 0.125 0.263157895 16 0 0 19 2L:7062227-7062303 6 Mnn1 FBtr0079401|FBtr0110978 7061720|7061720 7062665|7063586 TGTGTT 6mer3-8 dme-miR-317-3p 2L + 7062259 7062300 3'utr Mnn1 FlyBase G2158.1 TCCCCTATGTATTTATTGCTACAACTATGTGTTTTCCCCTCA 8 7062292 0.982090946 4 8 60 1 1.176091259 0 0.5 0.733333333 8 0 0 15 2L:7062259-7062300 6 10 674 FBgn0031885 716.3333333 17.91333333 27.53333333 0.013959981 0.558243394 0.363196126 -1 -6 -3.5 0.15 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 2L 7062349 7062355 + 2L_7062349_7062355_+ 0.619215595 0.619848754 0.619532175 0.00044774 Mnn1 FBtr0079401|FBtr0110978 7061720|7061720 7062665|7063586 2L + 7062323 7062425 3'utr Mnn1 FlyBase G2735.1 TTTATTGTGTTTAAGCGTAACTTAATTGGTGCTTTTCTTCGAAAACGAATGAGAAATATAGGTTCTGTGTTTGATTTGATCACACCTTGAGGCAAAAATCTTG 157 7062348 0.85260619 15 153 1482 0.967567568 1.951823035 0.07027027 0.133757962 0.264864865 157 5 1 179 2L:7062323-7062425 7 Mnn1 FBtr0079401|FBtr0110978 7061720|7061720 7062665|7063586 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 2L + 7062325 7062425 3'utr Mnn1 FlyBase G2159.1 TATTGTGTTTAAGCGTAACTTAATTGGTGCTTTTCTTCGAAAACGAATGAGAAATATAGGTTCTGTGTTTGATTTGATCACACCTTGAGGCAAAAATCTTG 113 7062348 0.903132634 10 108 1064 0.970930233 1.921686475 0.063953488 0.336283186 0.563953488 113 4 1 167 2L:7062325-7062425 7 114 675 FBgn0031885 716.3333333 17.91333333 27.53333333 0.159143788 6.363974693 4.140435835 1 1 1 0.15 dme-miR-282-5p 7mer-A1 GAGGCTA 2L 7062515 7062521 + 2L_7062515_7062521_+ 0.821399486 0.821776071 0.821587779 0.000266296 Mnn1 FBtr0079401|FBtr0110978 7061720|7061720 7062665|7063586 2L + 7062437 7062559 3'utr Mnn1 FlyBase G2736.1 TTGAACAATAACCGAATTGAAGTCCAAATGGATAGACGGACTGCTCGTATTTATGTATTTACTTTAAAGCATTTTATTGAGGCTAAGCTGATTAATTTAACTCTATTTACATATATATCCTCT 239 7062513 0.985110033 18 235 1917 0.989619377 2.456366033 0.429065744 0.179916318 0.321799308 239 3 0 286 2L:7062437-7062559 7 Mnn1 FBtr0079401|FBtr0110978 7061720|7061720 7062665|7063586 GAGGCTA 7mer-A1 dme-miR-282-5p 2L + 7062493 7062541 3'utr Mnn1 FlyBase G2160.2 ATTTACTTTAAAGCATTTTATTGAGGCTAAGCTGATTAATTTAACTCTA 138 7062513 0.746333047 9 133 1089 0.969387755 2.278753601 0.459183673 0.333333333 0.530612245 138 6 0 190 2L:7062493-7062541 7 179 676 FBgn0031885 716.3333333 17.91333333 27.53333333 0.249883667 9.992556755 6.501210654 2 2 2 0.15 dme-miR-11-3p 8mer-m1 CTGTGATG 2L 7062969 7062976 + 2L_7062969_7062976_+ 0.435679637 0.438596381 0.437138009 0.002062489 Mnn1 FBtr0110978 7061720 7063586 2L + 7062950 7062983 3'utr Mnn1 FlyBase G2738.1 TGATTTGTGCGTAGAGCATCTGTGATGAATAATA 26 7062968 0.81241145 2 23 151 0.90625 1.462397998 0 0.192307692 0.34375 26 3 0 29 2L:7062950-7062983 8 Mnn1 FBtr0110978 7061720 7063586 CTGTGATG 8mer-m1 dme-miR-11-3p 2L + 7062946 7062995 3'utr Mnn1 FlyBase G2163.1 AATTTGATTTGTGCGTAGAGCATCTGTGATGAATAATAATGTTTAAAAAA 35 7062968 0.952450363 4 33 211 0.959183673 1.672097858 0 0.314285714 0.510204082 35 2 0 47 2L:7062946-7062995 8 30.5 677 FBgn0031885 716.3333333 17.91333333 27.53333333 0.042577943 1.702642352 1.107748184 1 1 1 0.15 dme-miR-318-3p 7mer-A1 CCAGTGA 2L 7069854 7069860 - 2L_7069854_7069860_- 0.823345266 0.823342375 0.82334382 2.05E-06 Pvf2 FBtr0079423 7069534 7070160 2L - 7069819 7069887 3'utr Pvf2 FlyBase G8420.1 AATCTTAATTAAGCTGAGTTTAAGATGCCAGTGAAACTAGATAAAATCAGACATTGAGAACTGAAAGTA 23 7069833 0.946241372 6 23 99 1 1.414973348 0.192307692 0.086956522 0.192307692 23 0 0 26 2L:7069819-7069887 7 Pvf2 FBtr0079423 7069534 7070160 CCAGTGA 7mer-A1 dme-miR-318-3p 2L - 7069817 7069877 3'utr Pvf2 FlyBase G6545.1 AAGCTGAGTTTAAGATGCCAGTGAAACTAGATAAAATCAGACATTGAGAACTGAAAGTATT 13 7069833 0.737697084 5 13 55 1 1.301029996 0.15 0.230769231 0.5 13 0 0 20 2L:7069817-7069877 7 8 678 FBgn0031888 877.1766667 51.15666667 78.84 0.00912017 0.156382355 0.101471334 -27 -27 -27 0.15 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 7099159 7099166 - 2L_7099159_7099166_- 0.631122529 0.631123692 0.631123111 8.49E-07 Pvf3 FBtr0112612|FBtr0342658 7098186|7098186 7100092|7100092 2L - 7099152 7099189 3'utr Pvf3 FlyBase G8436.1 AAATTAAATTTTCATATTTAATTTCTAGTCAAATTTTC 68 7099167 0.743921356 4 67 723 0.988372093 1.929418926 0 0.235294118 0.395348837 68 1 0 85 2L:7099152-7099189 8 Pvf3 FBtr0112612|FBtr0342658 7098186|7098186 7100092|7100092 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 7099151 7099178 3'utr Pvf3 FlyBase G6556.1 TCATATTTAATTTCTAGTCAAATTTTCA 32 7099167 0.738120811 2 32 330 1 1.544068044 0 0.09375 0.171428571 32 0 0 35 2L:7099151-7099178 8 49.5 679 FBgn0085407 30.66666667 0.876666667 1.326666667 1.614130435 56.46387833 37.31155779 1 1 1 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 2L 7099396 7099401 - 2L_7099396_7099401_- 0.999208862 0.999937226 0.999573044 0.000514986 Pvf3 FBtr0112612|FBtr0342658 7098186|7098186 7100092|7100092 2L - 7099375 7099435 3'utr Pvf3 FlyBase G8438.1 ATGCGTATGCTAAATGAAATTCCAAATATATAAATTGACTGCGTTTTTAGTTTTAATTGAC 29 7099401 0.893762097 12 28 353 0.96875 1.491361694 0.09375 0.103448276 0.1875 29 1 0 31 2L:7099375-7099435 6 Pvf3 FBtr0112612|FBtr0342658 7098186|7098186 7100092|7100092 TTGACT 6mer3-8 dme-miR-1012-3p 2L - 7099376 7099428 3'utr Pvf3 FlyBase G6558.1 TGCTAAATGAAATTCCAAATATATAAATTGACTGCGTTTTTAGTTTTAATTGA 14 7099401 0.994798206 9 11 153 0.869565217 1.301029996 0 0.428571429 0.652173913 14 3 0 20 2L:7099376-7099428 6 18 680 FBgn0085407 30.66666667 0.876666667 1.326666667 0.586956522 20.53231939 13.5678392 0 0 0 0.15 dme-miR-14-3p 6mer3-8 AAGACT 2L 7099561 7099566 - 2L_7099561_7099566_- 0.999977936 0.999677003 0.999827469 0.000212768 Pvf3 FBtr0112612|FBtr0342658 7098186|7098186 7100092|7100092 2L - 7099549 7099594 3'utr Pvf3 FlyBase G8439.1 AAAAATCTGTATCTTAGCAAATGGAAATAAGACTTTTTTGCGCATG 62 7099559 0.755324505 6 61 536 0.960526316 1.86332286 0.026315789 0.161290323 0.315789474 62 3 0 73 2L:7099549-7099594 6 Pvf3 FBtr0112612|FBtr0342658 7098186|7098186 7100092|7100092 AAGACT 6mer3-8 dme-miR-14-3p 2L - 7099552 7099590 3'utr Pvf3 FlyBase G6559.1 ATCTGTATCTTAGCAAATGGAAATAAGACTTTTTTGCGC 28 7099559 0.69526919 4 23 213 0.904761905 1.579783597 0.047619048 0.321428571 0.547619048 28 4 0 38 2L:7099552-7099590 6 44.5 681 FBgn0085407 30.66666667 0.876666667 1.326666667 1.451086957 50.76045627 33.54271357 -7 -7 -7 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 71200 71205 + 2L_71200_71205_+ 0.970893291 0.955467789 0.96318054 0.010907476 dbr FBtr0306539|FBtr0306537|FBtr0078100 70894|70894|70894 71390|71390|71390 2L + 71144 71267 3'utr dbr FlyBase G403.1 TCGATTAATTATTCAGCGCTTAAGTTTTCTTTTGGGTTAAGTTTTGAACATATAATGTACCTTCTGGTGTATGTTAACATAAAATCCAGAATATGCCTTTAGACAGCAGAACGGAAGATATTTA 38 71199 0.987040899 10 35 308 0.918367347 1.352182518 0.469387755 0.210526316 0.387755102 38 3 1 45 2L:71144-71267 6 dbr FBtr0306539|FBtr0306537|FBtr0078100 70894|70894|70894 71390|71390|71390 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 71177 71217 3'utr dbr FlyBase G339.1 GGGTTAAGTTTTGAACATATAATGTACCTTCTGGTGTATGT 25 71199 0.804881606 3 25 214 1 1.591064607 0.179487179 0.4 0.615384615 25 0 0 39 2L:71177-71217 6 27 682 FBgn0067779 850.6933333 26.96666667 41.62666667 0.031738817 1.001236094 0.648622678 1 1 1 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 2L 7190783 7190788 - 2L_7190783_7190788_- 0.99997527 0.999336737 0.999656003 0.000451558 CG4497 FBtr0079418|FBtr0302948 7190429|7190429 7191401|7191401 2L - 7190748 7190814 3'utr CG4497 FlyBase G8445.1 TAGCCAGAGTTTATTGCCTCGATCTTTGTGTTATAGAATGTTTTCCCATTTCCAATGTTTCGGTTAA 15 7190790 0.986409356 6 15 131 1 1.230448921 0.058823529 0.133333333 0.235294118 15 0 0 17 2L:7190748-7190814 6 CG4497 FBtr0079418|FBtr0302948 7190429|7190429 7191401|7191401 TGTGTT 6mer3-8 dme-miR-317-3p 2L - 7190773 7190809 3'utr CG4497 FlyBase G6562.1 AGAGTTTATTGCCTCGATCTTTGTGTTATAGAATGTT 10 7190789 0.694115088 5 10 98 1 1.204119983 0 0.6 0.75 10 0 0 16 2L:7190773-7190809 6 9 683 FBgn0031895 127.87 6.053333333 9.286666667 0.070383984 1.486784141 0.969131371 2 1 1.5 0.15 dme-miR-283-5p 6mer3-8 TGATAT 2L 7195075 7195080 - 2L_7195075_7195080_- 0.839239649 0.922971768 0.881105708 0.059207606 CG4502 FBtr0079416|FBtr0079417 7194906|7194906 7195555|7195555 2L - 7194956 7195112 3'utr CG4502 FlyBase G8450.1 AAGTTATATAAGATTTACAGAATCAATTAGTCTGATATCTTGGTTCGACTGTGTTATAATTTGTTGTGATTTTTGTTGAACTTAAACAAACCGTGAATAAACCAAATTACAACATCAGCTTGTAAACATAAGTGTGTTCCTCGAACTTCGCACTTTC 114 7195086 0.978657045 26 110 1054 0.962962963 2.113943352 0.125925926 0.157894737 0.288888889 114 5 0 130 2L:7194956-7195112 6 CG4502 FBtr0079416|FBtr0079417 7194906|7194906 7195555|7195555 TGATAT 6mer3-8 dme-miR-283-5p 2L - 7194997 7195110 3'utr CG4502 FlyBase G6565.1 GTTATATAAGATTTACAGAATCAATTAGTCTGATATCTTGGTTCGACTGTGTTATAATTTGTTGTGATTTTTGTTGAACTTAAACAAACCGTGAATAAACCAAATTACAACATC 77 7195086 0.910032319 16 75 644 0.981818182 1.73239376 0.1 0.337662338 0.536363636 77 1 1 108 2L:7194997-7195110 6 63.5 684 FBgn0031896 751.2833333 44.36333333 68.21333333 0.08452204 1.431362236 0.930903049 6 6 6 0.15 dme-miR-8-3p 7mer-A1 AGTATTA 2L 7195195 7195201 - 2L_7195195_7195201_- 0.810160251 0.823277971 0.816719111 0.009275615 CG4502 FBtr0079416|FBtr0079417 7194906|7194906 7195555|7195555 2L - 7195175 7195214 3'utr CG4502 FlyBase G8451.1 AAATGGATATTTAAGTATTATTAGTTAAACAGGAACAAAA 11 7195205 0.992192846 5 9 109 0.846153846 1.041392685 0.307692308 0.181818182 0.307692308 11 2 0 11 2L:7195175-7195214 7 CG4502 FBtr0079416|FBtr0079417 7194906|7194906 7195555|7195555 AGTATTA 7mer-A1 dme-miR-8-3p 2L - 7195176 7195236 3'utr CG4502 FlyBase G6566.1 ATAGGAAGTTTCGCCGAATACAAAATGGATATTTAAGTATTATTAGTTAAACAGGAACAAA 11 7195204 0.992249327 5 8 83 0.769230769 0.698970004 0.230769231 0.181818182 0.307692308 11 2 1 10 2L:7195176-7195236 7 10 685 FBgn0031896 751.2833333 44.36333333 68.21333333 0.013310557 0.225411376 0.146598905 4 3 3.5 0.15 dme-miR-33-5p 8mer-A1 CAATGCAA 2L 7195488 7195495 - 2L_7195488_7195495_- 0.576906445 0.513279747 0.545093096 0.044990871 CG4502 FBtr0079416|FBtr0079417 7194906|7194906 7195555|7195555 2L - 7195480 7195535 3'utr CG4502 FlyBase G8453.1 AGGAAACTCAGCTCAGATGCTCTGCGTTTGCCAACACAACCAATGCAATTTAATAA 16 7195518 0.774238376 7 14 78 0.904761905 0.977723605 0.047619048 0.3125 0.476190476 16 1 1 19 2L:7195480-7195535 8 CG4502 FBtr0079416|FBtr0079417 7194906|7194906 7195555|7195555 CAATGCAA 8mer-A1 dme-miR-33-5p 2L - 7195442 7195548 3'utr CG4502 FlyBase G6567.2 ATTCCGGACCGCAAGGAAACTCAGCTCAGATGCTCTGCGTTTGCCAACACAACCAATGCAATTTAATAATCAGCCACCCAGCCAAGTTCGCTCATAGTAATACATCA 23 7195518 0.971582171 8 21 121 0.95 1.579783597 0.1 0.434782609 0.675 23 2 0 38 2L:7195442-7195548 8 6 686 FBgn0031896 751.2833333 44.36333333 68.21333333 0.007986334 0.135246825 0.087959343 23 23 23 0.15 dme-miR-283-5p 7mer-A1 GATATTA 2L 7205346 7205352 - 2L_7205346_7205352_- 0.782303268 0.615341446 0.698822357 0.118059892 CG13784 FBtr0110799|FBtr0330197|FBtr0330199|FBtr0330198 7205251|7204536|7205251|7205251 7208015|7208015|7206347|7206347 2L - 7205337 7205411 3'utr CG13784 FlyBase G8457.1 ATTTTGTAGCCCTGTAAGTTCAATTTGTATTAAAATCAACAAAATCAAACTTTAATCTCGATATTATTCTTTAAA 31 7205360 0.71730796 9 28 251 0.894736842 0.929418926 0.078947368 0.225806452 0.368421053 31 1 3 34 2L:7205337-7205411 7 CG13784 FBtr0330198|FBtr0330199|FBtr0330197|FBtr0110799 7205251|7205251|7204536|7205251 7206347|7206347|7208015|7208015 GATATTA 7mer-A1 dme-miR-283-5p 2L - 7205340 7205407 3'utr CG13784 FlyBase G6572.1 TGTAGCCCTGTAAGTTCAATTTGTATTAAAATCAACAAAATCAAACTTTAATCTCGATATTATTCTTT 18 7205360 0.734807248 6 18 150 1 1.431363764 0.074074074 0.277777778 0.518518519 18 0 0 27 2L:7205340-7205407 7 17 687 FBgn0031897 1244.07 88.35 137.0766667 0.013664826 0.192416525 0.124018189 8 8 8 0.15 dme-miR-1003-3p 8mer-A1 ATGTGAGA 2L 7205677 7205684 - 2L_7205677_7205684_- 0.610133152 0.618525777 0.614329464 0.005934464 CG13784 FBtr0110799|FBtr0330197|FBtr0330199|FBtr0330198 7205251|7204536|7205251|7205251 7208015|7208015|7206347|7206347 2L - 7205634 7205714 3'utr CG13784 FlyBase G8460.1 AGAACATAAAACCAATGTACATTACTTCTTATGTGAGATGCAGCTACAAAAATTAGCTTACAATGTAAACTAGTTTTAAAC 95 7205677 0.828359519 13 90 691 0.946428571 1.72427587 0.017857143 0.147368421 0.276785714 95 5 1 106 2L:7205634-7205714 8 CG13784 FBtr0330198|FBtr0330199|FBtr0330197|FBtr0110799 7205251|7205251|7204536|7205251 7206347|7206347|7208015|7208015 ATGTGAGA 8mer-A1 dme-miR-1003-3p 2L - 7205582 7205717 3'utr CG13784 FlyBase G6573.1 ACTAGAACATAAAACCAATGTACATTACTTCTTATGTGAGATGCAGCTACAAAAATTAGCTTACAATGTAAACTAGTTTTAAACATTTAGTTTCGGACAATGTGAATTTAAAGAAAAGGGTTTCAGCTGGGGAAGG 77 7205677 0.984363879 17 71 562 0.924369748 1.740362689 0.12605042 0.38961039 0.605042017 77 8 1 110 2L:7205582-7205717 8 66 688 FBgn0031897 1244.07 88.35 137.0766667 0.053051677 0.747028862 0.481482382 -7 -7 -7 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 7220413 7220420 - 2L_7220413_7220420_- 0.648634155 0.634362104 0.64149813 0.010091899 ico FBtr0079413|FBtr0079413|FBtr0079413 7220367|7220367|7220367 7220532|7220532|7220532 2L - 7220382 7220440 3'utr ico FlyBase G8472.1 ACAACAATTTTCAGTTTTCACTGTGATAAATGCGAAGTGTACAGTTATTTGTATAATAA 23 7220425 0.987635954 8 20 183 0.870967742 1.431363764 0.096774194 0.304347826 0.483870968 23 4 0 27 2L:7220382-7220440 8 ico FBtr0079413|FBtr0079413|FBtr0079413 7220367|7220367|7220367 7220532|7220532|7220532 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 7220401 7220429 3'utr ico FlyBase G6584.1 CAGTTTTCACTGTGATAAATGCGAAGTGT 14 7220424 0.834684988 4 10 106 0.823529412 1.146128036 0 0.214285714 0.352941176 14 3 0 14 2L:7220401-7220429 8 18.5 689 FBgn0263133 394.38 19.21 29.5 0.046909072 0.963040083 0.627118644 5 4 4.5 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 2L 7226705 7226711 - 2L_7226705_7226711_- 0.620204241 0.619887811 0.620046026 0.000223729 Ndae1 FBtr0331659|FBtr0331662|FBtr0299538|FBtr0331661|FBtr0331663|FBtr0331660|FBtr0299537 7226136|7226136|7226460|7226460|7226460|7226460|7226460 7226914|7226914|7226914|7226914|7226914|7226914|7226914 2L - 7226681 7226758 3'utr Ndae1 FlyBase G8477.1 ACAAAACCAACGATAAACTCAATTATTTATAGATTTTTTTAATAATTTGCATTTTGTCGGCCTTGATACATTTTATTG 12 7226695 0.987914998 5 11 113 0.916666667 1.041392685 0 0 0 12 1 0 11 2L:7226681-7226758 7 Ndae1 FBtr0299537|FBtr0331660|FBtr0331663|FBtr0331661|FBtr0299538|FBtr0331662|FBtr0331659 7226460|7226460|7226460|7226460|7226460|7226136|7226136 7226914|7226914|7226914|7226914|7226914|7226914|7226914 TGCATTT 7mer-m8 dme-miR-277-3p 2L - 7226673 7226759 3'utr Ndae1 FlyBase G6588.1 CACAAAACCAACGATAAACTCAATTATTTATAGATTTTTTTAATAATTTGCATTTTGTCGGCCTTGATACATTTTATTGAACTAGTT 8 7226712 0.989669798 6 8 78 1 1.041392685 0 0.25 0.454545455 8 0 0 11 2L:7226673-7226759 7 6.5 690 FBgn0259111 820.0933333 22.69 34.66 0.007925927 0.28646981 0.187536065 -16 1 -7.5 0.15 dme-miR-8-3p 6mer2-7 AGTATT 2L 7384631 7384636 - 2L_7384631_7384636_- 0.986776468 0.707623675 0.847200072 0.197390838 CG5149 FBtr0079469 7384484 7384886 2L - 7384597 7384674 3'utr CG5149 FlyBase G8484.1 ATACAATGTATAATGGATATAGTTTATGAAATACTGAGAGTATTGTTGTTGCGTTTTAGATCTTAAAGTGAGAAAAGT 10 7384664 0.776102219 8 10 83 1 1.041392685 0.363636364 0.1 0.181818182 10 0 0 11 2L:7384597-7384674 6 CG5149 FBtr0079469 7384484 7384886 AGTATT 6mer2-7 dme-miR-8-3p 2L - 7384603 7384670 3'utr CG5149 FlyBase G6591.1 AATGTATAATGGATATAGTTTATGAAATACTGAGAGTATTGTTGTTGCGTTTTAGATCTTAAAGTGAG 5 7384640 0.972724857 5 5 44 1 0.698970004 0.2 0 0 5 0 0 5 2L:7384603-7384670 6 2.5 691 FBgn0031904 297.6666667 19.02666667 29.12333333 0.008398656 0.131394534 0.085841822 28 4 16 0.15 dme-miR-1003-3p 7mer-A1 TGTGAGA 2L 7384830 7384836 - 2L_7384830_7384836_- 0.795241558 0.815835636 0.805538597 0.014562157 CG5149 FBtr0079469 7384484 7384886 2L - 7384781 7384859 3'utr CG5149 FlyBase G8486.1 GTTTTGTTTTATCATCGAGAATTTGTGAGACCATGCCCGATATGGGTGTGCAGTTAATGATTCAATTCAGTTTCCTTAG 20 7384837 0.979498461 5 20 144 1 1.361727836 0.304347826 0.15 0.260869565 20 0 0 23 2L:7384781-7384859 7 CG5149 FBtr0079469 7384484 7384886 TGTGAGA 7mer-A1 dme-miR-1003-3p 2L - 7384818 7384860 3'utr CG5149 FlyBase G6592.1 AGTTTTGTTTTATCATCGAGAATTTGTGAGACCATGCCCGATA 14 7384838 0.93459576 3 14 76 1 1.255272505 0.166666667 0.214285714 0.388888889 14 0 0 18 2L:7384818-7384860 7 15.5 692 FBgn0031904 297.6666667 19.02666667 29.12333333 0.052071669 0.814646111 0.532219297 1 2 1.5 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2L 7472626 7472632 - 2L_7472626_7472632_- 0.671744998 0.671712828 0.671728913 2.28E-05 Ziz FBtr0330722|FBtr0330726|FBtr0330724|FBtr0332201|FBtr0330721|FBtr0330728|FBtr0330723|FBtr0330725|FBtr0330727 7472511|7472511|7472511|7472511|7472511|7472511|7472511|7472511|7472511 7473645|7473645|7473645|7473110|7473645|7473645|7473645|7473645|7473645 2L - 7472604 7472682 3'utr Ziz FlyBase G8509.1 GAAATTAGTTTTAGTGTTAGACAAATAAGTTCCCGCAAGCAACAGAACTTACCAAAGTATTCAGATAAAGGAAAAACCT 109 7472633 0.796257468 8 108 470 0.991935484 2.089905111 0.048387097 0.119266055 0.225806452 109 1 0 123 2L:7472604-7472682 7 Ziz FBtr0330725|FBtr0330727|FBtr0330728|FBtr0330723|FBtr0332201|FBtr0330721|FBtr0330722|FBtr0330726|FBtr0330724 7472511|7472511|7472511|7472511|7472511|7472511|7472511|7472511|7472511 7473645|7473645|7473645|7473645|7473110|7473645|7473645|7473645|7473645 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 7472539 7472680 3'utr Ziz FlyBase G6606.1 AATTAGTTTTAGTGTTAGACAAATAAGTTCCCGCAAGCAACAGAACTTACCAAAGTATTCAGATAAAGGAAAAACCTATTTAACAGATCTACGGATATATATTTACATACATGCATTTTCTAGTGAAATCGTATAATGAACT 104 7472633 0.971371604 15 100 586 0.959183673 1.672097858 0.020408163 0.346153846 0.537414966 104 4 2 141 2L:7472539-7472680 7 83.5 693 FBgn0260486 1355.053333 19.13333333 29.37 0.061621191 4.364111498 2.843037113 1 1 1 0.15 dme-miR-965-3p 6mer3-8 TACGCT 2L 76150 76155 + 2L_76150_76155_+ 0.953217755 0.954002975 0.953610365 0.00055522 galectin FBtr0331680|FBtr0302164|FBtr0301733|FBtr0078101|FBtr0306540 76097|76097|76097|76097|76097 76211|76211|76211|76211|76211 2L + 76126 76181 3'utr galectin FlyBase G418.1 AGTTTAGCGACAATAAAAAAGTGATACGCTCGTGTTTCATTATACAATATTTTTGT 108 76150 0.834531796 8 105 633 0.974789916 2.064457989 0.25210084 0.074074074 0.159663866 108 3 0 116 2L:76126-76181 6 galectin FBtr0306540|FBtr0078101|FBtr0301733|FBtr0302164|FBtr0331680 76097|76097|76097|76097|76097 76211|76211|76211|76211|76211 TACGCT 6mer3-8 dme-miR-965-3p 2L + 76123 76174 3'utr galectin FlyBase G354.1 AGTAGTTTAGCGACAATAAAAAAGTGATACGCTCGTGTTTCATTATACAATA 67 76150 0.821748983 9 65 381 0.97826087 1.954242509 0.27173913 0.298507463 0.489130435 67 2 0 90 2L:76123-76174 6 85.5 694 FBgn0031213 880.07 63.82 97.16666667 0.097151363 1.339705421 0.879931389 0 0 0 0.15 dme-miR-980-5p 6mer2-7 AAAAAC 2L 7723243 7723248 - 2L_7723243_7723248_- 0.996545864 0.996369893 0.996457878 0.000124451 CG13795 FBtr0343407 7723043 7723555 2L - 7723238 7723286 3'utr CG13795 FlyBase G8579.1 TTACATAGTTTGTCTATCGAGAGAGAGAGAGAGCTTTTAAAAACGTGTA 26 7723250 0.74404892 6 25 125 0.965517241 1.447158031 0.103448276 0.115384615 0.206896552 26 1 0 28 2L:7723238-7723286 6 CG13795 FBtr0343407 7723043 7723555 AAAAAC 6mer2-7 dme-miR-980-5p 2L - 7723239 7723277 3'utr CG13795 FlyBase G6651.1 TTGTCTATCGAGAGAGAGAGAGAGCTTTTAAAAACGTGT 16 7723250 0.717494537 3 16 80 1 1.380211242 0.041666667 0.4375 0.625 16 0 0 24 2L:7723239-7723277 6 18.5 695 FBgn0031937 195.5733333 10.18333333 15.44666667 0.094593673 1.816693944 1.1976694 2 2 2 0.15 dme-miR-305-3p 7mer-m8 ATGTGCC 2L 7786514 7786520 - 2L_7786514_7786520_- 0.674226858 0.674268889 0.674247874 2.97E-05 CG7149 FBtr0079496 7786158 7786899 2L - 7786496 7786537 3'utr CG7149 FlyBase G8600.1 ATGATCCGATAAGTATTATGTGCCTGAAGACAGCTACTGAAT 119 7786519 0.694548704 4 119 689 1 2.158362492 0.159722222 0.159663866 0.305555556 119 0 0 144 2L:7786496-7786537 7 CG7149 FBtr0079496 7786158 7786899 ATGTGCC 7mer-m8 dme-miR-305-3p 2L - 7786495 7786540 3'utr CG7149 FlyBase G6663.1 TGCATGATCCGATAAGTATTATGTGCCTGAAGACAGCTACTGAATG 79 7786519 0.688869565 4 79 451 1 2.06069784 0.243478261 0.291139241 0.513043478 79 0 0 115 2L:7786495-7786540 7 99 696 FBgn0031948 141.2833333 6.946666667 10.71666667 0.700719594 14.25143954 9.237947123 -1 -1 -1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 7786831 7786837 - 2L_7786831_7786837_- 0.795496044 0.79758865 0.796542347 0.001479692 CG7149 FBtr0079496|FBtr0079496|FBtr0079496|FBtr0343406|FBtr0343406|FBtr0343406 7786158|7786158|7786158|7786158|7786158|7786158 7786899|7786899|7786899|7786899|7786899|7786899 2L - 7786804 7786852 3'utr CG7149 FlyBase G8601.1 CAAAATCAACCATCTTGTGATATATAGTATATATACATATATATATAAA 27 7786839 0.9920715 6 20 234 0.724137931 0.720159303 0.034482759 0.074074074 0.137931034 27 5 3 21 2L:7786804-7786852 7 CG7149 FBtr0079496|FBtr0079496|FBtr0079496|FBtr0343406|FBtr0343406|FBtr0343406 7786158|7786158|7786158|7786158|7786158|7786158 7786899|7786899|7786899|7786899|7786899|7786899 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 7786814 7786852 3'utr CG7149 FlyBase G6665.1 CAAAATCAACCATCTTGTGATATATAGTATATATACATA 16 7786838 0.743488012 4 14 137 0.875 1.021189299 0 0.3125 0.541666667 16 2 1 21 2L:7786814-7786852 7 21 697 FBgn0031948 141.2833333 6.946666667 10.71666667 0.14863749 3.02303263 1.959564541 2 1 1.5 0.15 dme-miR-278-3p 7mer-m8 CCCACCG 2L 7791689 7791695 - 2L_7791689_7791695_- 0.606343911 0.606720979 0.606532445 0.00026665 LKR FBtr0079495|FBtr0343404 7791404|7791173 7791757|7791757 2L - 7791651 7791805 stop_codon LKR FlyBase G8606.1 CGCTCCGAGGGTCTGACTGCCACGGAAACCTCCAGATGGCTAAATTAAGTGATCTTAACTGATCCCGAGAAAATAGGCTTAAGTCTTCATTAATATTACTTTTTTGACTGCCCACCGCGTCGGGTGATACTTCTTGTTTTATCGCTCGGGTATTT 206 7791686 0.978352842 24 189 1276 0.925925926 1.653212514 0.152263374 0.165048544 0.29218107 206 14 4 225 2L:7791651-7791805 7 LKR FBtr0079495|FBtr0343404 7791404|7791173 7791757|7791757 CCCACCG 7mer-m8 dme-miR-278-3p 2L - 7791654 7791805 stop_codon LKR FlyBase G6669.1 CGCTCCGAGGGTCTGACTGCCACGGAAACCTCCAGATGGCTAAATTAAGTGATCTTAACTGATCCCGAGAAAATAGGCTTAAGTCTTCATTAATATTACTTTTTTGACTGCCCACCGCGTCGGGTGATACTTCTTGTTTTATCGCTCGGGTA 131 7791686 0.964811439 20 115 750 0.882051282 1.758407192 0.174358974 0.351145038 0.564102564 131 21 2 172 2L:7791654-7791805 7 87 698 FBgn0025687 1820.93 67.29333333 103.6233333 0.047777784 1.292847236 0.839579245 -9 -9 -9 0.15 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 7796640 7796645 - 2L_7796640_7796645_- 0.999999924 0.848817142 0.924408533 0.106902383 Herp FBtr0343403|FBtr0079493 7796312|7796544 7796929|7796929 2L - 7796624 7796665 3'utr Herp FlyBase G8627.1 AAGAACGTACTCTGTTTTTGATGTGAATAGTAGAATGTTTAT 7 7796650 0.986193808 7 7 59 1 1 0.3 0.285714286 0.5 7 0 0 10 2L:7796624-7796665 6 Herp FBtr0343403|FBtr0079493 7796312|7796544 7796929|7796929 ATGTGA 6mer3-8 dme-miR-1003-3p 2L - 7796571 7796657 3'utr Herp FlyBase G6686.1 ACTCTGTTTTTGATGTGAATAGTAGAATGTTTATAATCTGCACTGCAATCTGTGCTAGAGACGAACCTATGAAACCAAGATGCAATT 11 7796648 0.985970738 7 10 79 0.9375 1.176091259 0.0625 0.454545455 0.625 11 1 0 15 2L:7796571-7796657 6 5.5 699 FBgn0031950 371.7266667 21.11 32.2 0.014795818 0.260540028 0.170807453 5 3 4 0.15 dme-miR-1008-3p 6mer2-7 GCTGTG 2L 7825909 7825914 - 2L_7825909_7825914_- 0.95597816 0.944236582 0.950107371 0.008302565 Rack1 FBtr0331237 7825627 7826760 2L - 7825718 7825940 3'utr Rack1 FlyBase G8649.2 CTGTGCTTCTCGCCCAACCGCTACTGGCTGTGCGTGGCCTACGGACCCTCGATCAAGATCTGGGATCTGGCATGCAAGAAGACCGTTGAGGAGCTGCGCCCCGAGGTCGTTTCGCCCACGTCGAAGGCCGATCAGCCCCAGTGCCTGTCCCTGGCCTGGTCCACCGACGGCCAGACTCTGTTCGCCGGCTACTCCGACAACACCATCCGCGTCTGGCAGGTGT 84 7825916 0.812652607 22 75 388 0.961904762 2.004321374 0.19047619 0.19047619 0.352380952 84 4 0 101 2L:7825718-7825940 6 Rack1 FBtr0331237 7825627 7826760 GCTGTG 6mer2-7 dme-miR-1008-3p 2L - 7825866 7825990 3'utr Rack1 FlyBase G6705.1 ATGACGGCAAGAACCTGTACACTCTGGAGCACAACGACATCATCAACGCCCTGTGCTTCTCGCCCAACCGCTACTGGCTGTGCGTGGCCTACGGACCCTCGATCAAGATCTGGGATCTGGCATGC 55 7825916 0.951693585 11 53 238 0.975903614 1.908485019 0.204819277 0.4 0.602409639 55 2 0 81 2L:7825866-7825990 6 38 700 FBgn0020618 8311.833333 901.1766667 1361.153333 0.004571795 0.042167093 0.027917501 2 2 2 0.15 dme-miR-14-3p 6mer3-8 AAGACT 2L 7892660 7892665 - 2L_7892660_7892665_- 0.982980923 0.998416771 0.990698847 0.01091483 Snoo FBtr0112719|FBtr0112718|FBtr0343409 7892323|7891185|7892323 7894084|7894084|7894084 2L - 7892606 7892685 3'utr Snoo FlyBase G8662.1 ACGTTTGCTAACTAGTTCTTAAGACTTCCCTCCGGCGAAGTTCTTTCCCTATTGTGAATGGCATCGAATGGTCCCCCTTT 25 7892660 0.843977212 5 24 196 0.964285714 1.431363764 0.035714286 0.12 0.214285714 25 1 0 27 2L:7892606-7892685 6 Snoo FBtr0112719|FBtr0112718|FBtr0343409 7892323|7891185|7892323 7894084|7894084|7894084 AAGACT 6mer3-8 dme-miR-14-3p 2L - 7892608 7892679 3'utr Snoo FlyBase G6717.1 GCTAACTAGTTCTTAAGACTTCCCTCCGGCGAAGTTCTTTCCCTATTGTGAATGGCATCGAATGGTCCCCCT 23 7892660 0.979164065 7 22 157 0.935483871 0.985276743 0.096774194 0.217391304 0.419354839 23 0 2 29 2L:7892608-7892679 6 12 701 FBgn0085450 1551.763333 25.89666667 39.58333333 0.007733138 0.4633801 0.303157895 -5 -5 -5 0.15 dme-miR-970-3p 6mer2-7 CTTATG 2L 7893547 7893552 - 2L_7893547_7893552_- 0.890995403 0.974807973 0.932901688 0.059264458 Snoo FBtr0112719|FBtr0112717|FBtr0112718|FBtr0343409 7892323|7893429|7891185|7892323 7894084|7894084|7894084|7894084 2L - 7893543 7893577 3'utr Snoo FlyBase G8670.1 AACTTTCTTTGGAAAACTTTTTACCCTTATGCAAA 15 7893557 0.727693936 2 15 151 1 1.342422681 0.181818182 0.333333333 0.545454545 15 0 0 22 2L:7893543-7893577 6 Snoo FBtr0112719|FBtr0112717|FBtr0112718|FBtr0343409 7892323|7893429|7891185|7892323 7894084|7894084|7894084|7894084 CTTATG 6mer2-7 dme-miR-970-3p 2L - 7893534 7893577 3'utr Snoo FlyBase G6722.1 AACTTTCTTTGGAAAACTTTTTACCCTTATGCAAAATCTATTCA 9 7893557 0.988801266 3 9 91 1 1.079181246 0 0.333333333 0.5 9 0 0 12 2L:7893534-7893577 6 11.5 702 FBgn0085450 1551.763333 25.89666667 39.58333333 0.007410924 0.444072596 0.290526316 5 5 5 0.15 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 8039206 8039211 + 2L_8039206_8039211_+ 0.999999818 0.998537139 0.999268479 0.001034285 Cka FBtr0306001|FBtr0079537 8038200|8038200 8040826|8040826 2L + 8039176 8039241 3'utr Cka FlyBase G2898.1 ATTAATTAGAGGACAGTCGAGGTGAGACTTTGATGAACGGCGGCCGGGTTTATATACGCAGGTAGC 34 8039206 0.757407323 7 34 168 1 1.579783597 0.421052632 0.088235294 0.184210526 34 0 0 38 2L:8039176-8039241 6 Cka FBtr0079537|FBtr0306001 8038200|8038200 8040826|8040826 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L + 8039176 8039229 3'utr Cka FlyBase G2289.1 ATTAATTAGAGGACAGTCGAGGTGAGACTTTGATGAACGGCGGCCGGGTTTATA 23 8039206 0.959537009 6 23 115 1 1.491361694 0.516129032 0.260869565 0.451612903 23 0 0 31 2L:8039176-8039229 6 27 703 FBgn0044323 2376.946667 58.08333333 89.27666667 0.011359111 0.464849354 0.302430646 0 0 0 0.15 dme-miR-2a-2-5p 7mer-A1 GATGAGA 2L 8039372 8039378 + 2L_8039372_8039378_+ 0.707917736 0.768531109 0.738224423 0.042860146 Cka FBtr0306001|FBtr0079537 8038200|8038200 8040826|8040826 2L + 8039304 8039411 3'utr Cka FlyBase G2899.1 ATATAATTTCAATTGTCATTACCAAGGGGAGTACGCAATGCTTGATGGATTAACCACGACCATGTGAGGATGAGATATAAATAATAACTGCAGGCAAGCTATAAACGT 18 8039391 0.937994938 13 17 82 0.954545455 1.322219295 0.409090909 0.222222222 0.363636364 18 1 0 21 2L:8039304-8039411 7 Cka FBtr0079537|FBtr0306001 8038200|8038200 8040826|8040826 GATGAGA 7mer-A1 dme-miR-2a-2-5p 2L + 8039316 8039417 3'utr Cka FlyBase G2290.1 TTGTCATTACCAAGGGGAGTACGCAATGCTTGATGGATTAACCACGACCATGTGAGGATGAGATATAAATAATAACTGCAGGCAAGCTATAAACGTATGCTA 15 8039373 0.955696432 8 15 70 1 1.397940009 0.08 0.533333333 0.72 15 0 0 25 2L:8039316-8039417 7 6.5 704 FBgn0044323 2376.946667 58.08333333 89.27666667 0.002734601 0.111908178 0.072807378 -19 -1 -10 0.15 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 8039613 8039618 + 2L_8039613_8039618_+ 0.913669102 0.995639346 0.954654224 0.057961684 Cka FBtr0306001|FBtr0079537 8038200|8038200 8040826|8040826 2L + 8039598 8039642 3'utr Cka FlyBase G2901.1 TGAACAGATTTAGATATGTGACTTGAACGTGAACGCCGAGCAACT 16 8039621 0.96875398 5 14 79 0.947368421 1.255272505 0.263157895 0.1875 0.315789474 16 1 0 18 2L:8039598-8039642 6 Cka FBtr0079537|FBtr0306001 8038200|8038200 8040826|8040826 ATGTGA 6mer3-8 dme-miR-1003-3p 2L + 8039597 8039649 3'utr Cka FlyBase G2291.1 ATGAACAGATTTAGATATGTGACTTGAACGTGAACGCCGAGCAACTCAATATT 13 8039621 0.983132895 4 11 82 0.866666667 0.812913357 0.4 0.153846154 0.266666667 13 1 1 13 2L:8039597-8039649 6 12.5 705 FBgn0044323 2376.946667 58.08333333 89.27666667 0.005258847 0.215208034 0.140014188 -8 -8 -8 0.15 dme-miR-980-5p 6mer2-7 AAAAAC 2L 8039784 8039789 + 2L_8039784_8039789_+ 0.760703158 0.827720329 0.794211744 0.047388246 Cka FBtr0306001|FBtr0079537 8038200|8038200 8040826|8040826 2L + 8039747 8039834 3'utr Cka FlyBase G2902.2 CCAAAAACTTGATATTCGAAACCGACGAATCAGAATCAAAAACGATTGCGATCTGTGTACACCAAGCAAATCCTCTATTATTTAAATT 15 8039793 0.75537921 8 13 74 0.842105263 0.602059991 0.157894737 0.133333333 0.315789474 15 0 3 16 2L:8039747-8039834 6 Cka FBtr0079537|FBtr0306001 8038200|8038200 8040826|8040826 AAAAAC 6mer2-7 dme-miR-980-5p 2L + 8039772 8039820 3'utr Cka FlyBase G2293.1 CGAATCAGAATCAAAAACGATTGCGATCTGTGTACACCAAGCAAATCCT 6 8039792 0.971754123 5 6 35 1 0.954242509 0.333333333 0.333333333 0.555555556 6 0 0 9 2L:8039772-8039820 6 6 706 FBgn0044323 2376.946667 58.08333333 89.27666667 0.002524247 0.103299857 0.06720681 -9 -8 -8.5 0.15 dme-miR-318-3p 6mer3-8 CCCAGT 2L 8053828 8053833 + 2L_8053828_8053833_+ 0.963494308 0.97974167 0.971617989 0.011488647 CG7466 FBtr0344789|FBtr0344788 8053047|8053047 8054326|8054326 2L + 8053804 8053849 3'utr CG7466 FlyBase G2914.1 AAAGTATTAATTATGATATTCCTTCCCAGTTGTGGTGGCTAGCATT 33 8053822 0.650022033 7 32 300 0.974358974 1.579783597 0.128205128 0.151515152 0.282051282 33 1 0 38 2L:8053804-8053849 6 CG7466 FBtr0344789|FBtr0344788 8053047|8053047 8054326|8054326 CCCAGT 6mer3-8 dme-miR-318-3p 2L + 8053809 8053848 3'utr CG7466 FlyBase G2301.1 ATTAATTATGATATTCCTTCCCAGTTGTGGTGGCTAGCAT 15 8053822 0.671704879 4 12 135 0.80952381 0.62838893 0.333333333 0.333333333 0.523809524 15 1 3 17 2L:8053809-8053848 6 23.5 707 FBgn0031981 647.3533333 7.71 11.75333333 0.036301659 3.047989624 1.999432785 6 6 6 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 8053898 8053903 + 2L_8053898_8053903_+ 0.932392985 0.931419224 0.931906104 0.000688581 CG7466 FBtr0344789|FBtr0344788 8053047|8053047 8054326|8054326 2L + 8053866 8053937 3'utr CG7466 FlyBase G2915.1 TAGCTCTCTACTGCGCACTCTTACGCACCGGTGTACCTACTATTTTAAGAACGAGAAACTATTTTTATGATC 289 8053897 0.914472987 11 284 2129 0.987692308 2.205475037 0.04 0.096885813 0.196923077 289 3 1 321 2L:8053866-8053937 6 CG7466 FBtr0344789|FBtr0344788 8053047|8053047 8054326|8054326 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 8053859 8053920 3'utr CG7466 FlyBase G2302.1 AGTTCTTTAGCTCTCTACTGCGCACTCTTACGCACCGGTGTACCTACTATTTTAAGAACGAG 191 8053897 0.916510197 7 188 1359 0.982578397 2.149219113 0.059233449 0.371727749 0.581881533 191 4 1 282 2L:8053859-8053920 6 230.5 708 FBgn0031981 647.3533333 7.71 11.75333333 0.356065209 29.89623865 19.61145774 1 1 1 0.15 dme-miR-184-3p 7mer-A1 CCGTCCA 2L 8074388 8074394 - 2L_8074388_8074394_- 0.613382353 0.520796289 0.567089321 0.065468259 Mcr FBtr0079543 8074115 8074955 2L - 8074254 8074437 3'utr Mcr FlyBase G8829.1 GAATACATTTTTAAACGAAATGAAGTGAAAATCGTTGAAGAAACCGTCCAATTAATTTATGCAAATAATGAATCTGCATAGTTTGTAAGTTTTATACGTATATACGCCTTCATATGAACCACAATTAGTTTATAAATTCCCAACACAAATCTCACATAGCCATGTACATGAAGCTACTAAGCGA 182 8074385 0.845855747 25 164 1271 0.906862745 1.966141733 0.274509804 0.10989011 0.205882353 182 18 1 185 2L:8074254-8074437 7 Mcr FBtr0079543 8074115 8074955 CCGTCCA 7mer-A1 dme-miR-184-3p 2L - 8074239 8074417 3'utr Mcr FlyBase G6857.1 TGAAGTGAAAATCGTTGAAGAAACCGTCCAATTAATTTATGCAAATAATGAATCTGCATAGTTTGTAAGTTTTATACGTATATACGCCTTCATATGAACCACAATTAGTTTATAAATTCCCAACACAAATCTCACATAGCCATGTACATGAAGCTACTAAGCGAGAAACAAGGAAATTT 131 8074385 0.982666893 25 120 903 0.921052632 1.640978057 0.405263158 0.328244275 0.536842105 131 12 3 175 2L:8074239-8074417 7 100 709 FBgn0267488 1127.406667 21.51 32.91333333 0.088699138 4.649000465 3.038282358 -9 -9 -9 0.15 dme-miR-184-3p 8mer-A1 TCCGTCCA 2L 8074805 8074812 - 2L_8074805_8074812_- 0.629267276 0.629298609 0.629282943 2.21E-05 Mcr FBtr0079543 8074115 8074955 2L - 8074780 8074841 3'utr Mcr FlyBase G8830.2 AGTTTTTTTGTTTGCCAACGAAATTGCATTCCGTCCAAAAATGCTGGTCAACATTTTGGTTT 5777 8074813 0.742386623 15 5720 31649 0.991896976 2.689879423 0.277239184 0.157348105 0.295615685 5777 43 13 6855 2L:8074780-8074841 8 Mcr FBtr0079543 8074115 8074955 TCCGTCCA 8mer-A1 dme-miR-184-3p 2L - 8074764 8074841 3'utr Mcr FlyBase G6862.1 AGTTTTTTTGTTTGCCAACGAAATTGCATTCCGTCCAAAAATGCTGGTCAACATTTTGGTTTTATTTTTAGTTCTTTT 3688 8074813 0.924325697 17 3625 19427 0.983850481 2.558068254 0.288332426 0.369577007 0.578116494 3688 75 14 5422 2L:8074764-8074841 8 4719 710 FBgn0267488 1127.406667 21.51 32.91333333 4.185712343 219.3863319 143.3765445 1 1 1 0.15 dme-miR-305-3p 6mer2-7 TGTGCC 2L 8108394 8108399 + 2L_8108394_8108399_+ 0.912677472 0.903245093 0.907961282 0.006669714 Bsg FBtr0079570|FBtr0079567|FBtr0079571|FBtr0079568|FBtr0079566|FBtr0079572|FBtr0079569|FBtr0079573 8107883|8107883|8107883|8107883|8107883|8107883|8107883|8107883 8109458|8109458|8116531|8116531|8109458|8109458|8109458|8109458 2L + 8108370 8108521 5'utr Bsg FlyBase G2934.3 ATTTTGTATTATAATGAAGTCCACTGTGCCTGGAGCGTCGCAAAGAAATTAATAAAATAACGAGACCCAGAGTAGTGAAATGGAGAGTGATCCACTAATCGTTGTGGTTTCTACTTTTTTTTCGATGTGTGCTAAGCGAAAGCAAATATATT 507 8108394 0.844704866 16 499 2393 0.988448845 2.476396827 0.268976898 0.169625247 0.305280528 507 6 1 599 2L:8108370-8108521 6 Bsg FBtr0079569|FBtr0079573|FBtr0079566|FBtr0079572|FBtr0079571|FBtr0079568|FBtr0079570|FBtr0079567 8107883|8107883|8107883|8107883|8107883|8107883|8107883|8107883 8109458|8109458|8109458|8109458|8116531|8116531|8109458|8109458 TGTGCC 6mer2-7 dme-miR-305-3p 2L + 8108373 8108417 5'utr Bsg FlyBase G2321.2 TTGTATTATAATGAAGTCCACTGTGCCTGGAGCGTCGCAAAGAAA 301 8108394 0.779209661 6 296 1285 0.98553719 2.678518379 0.274793388 0.438538206 0.650826446 301 7 0 477 2L:8108373-8108417 6 374.5 711 FBgn0261822 8004.233333 323.89 495.0033333 0.046787741 1.156256754 0.756560562 0 0 0 0.15 dme-miR-304-5p 7mer-m8 TGAGATT 2L 8109358 8109364 + 2L_8109358_8109364_+ 0.616613912 0.620196087 0.618405 0.002532998 Bsg FBtr0079570|FBtr0079567|FBtr0079571|FBtr0079568|FBtr0079566|FBtr0079572|FBtr0079569|FBtr0079573 8107883|8107883|8107883|8107883|8107883|8107883|8107883|8107883 8109458|8109458|8116531|8116531|8109458|8109458|8109458|8109458 2L + 8109288 8109413 stop_codon Bsg FlyBase G2938.2 TGTATCTAGTATCTAAACACTTGTGCTATTCTCTACCGATTACAACTATCCATTATGATTTTGTGAGTTTTGAGATTGATTTCTACCGAAATATAAAACAAACAACAACAACAAAAAATACAATTG 182 8109358 0.985359599 23 171 1745 0.952380952 1.823908741 0.076190476 0.142857143 0.257142857 182 8 2 200 2L:8109288-8109413 7 Bsg FBtr0079569|FBtr0079573|FBtr0079566|FBtr0079572|FBtr0079571|FBtr0079568|FBtr0079570|FBtr0079567 8107883|8107883|8107883|8107883|8107883|8107883|8107883|8107883 8109458|8109458|8109458|8109458|8116531|8116531|8109458|8109458 TGAGATT 7mer-m8 dme-miR-304-5p 2L + 8109283 8109386 stop_codon Bsg FlyBase G2327.1 TTCTTTGTATCTAGTATCTAAACACTTGTGCTATTCTCTACCGATTACAACTATCCATTATGATTTTGTGAGTTTTGAGATTGATTTCTACCGAAATATAAAAC 113 8109358 0.871448912 26 110 1107 0.973856209 1.872156273 0.078431373 0.283185841 0.470588235 113 3 1 149 2L:8109283-8109386 7 83.5 712 FBgn0261822 8004.233333 323.89 495.0033333 0.01043198 0.257803575 0.168685733 0 0 0 0.15 dme-miR-252-5p 7mer-m8 GTACTTA 2L 8117339 8117345 - 2L_8117339_8117345_- 0.588299396 0.588276804 0.5882881 1.60E-05 mon2 FBtr0339674|FBtr0301229 8117290|8116963 8117519|8117519 2L - 8117311 8117357 3'utr mon2 FlyBase G8843.1 CTAAGCATCTATGTACTTACATACATACCTAAACATATATATATATA 8 8117346 0.979569678 3 8 61 1 0.954242509 0 0.125 0.222222222 8 0 0 9 2L:8117311-8117357 7 mon2 FBtr0339674|FBtr0301229 8117290|8116963 8117519|8117519 GTACTTA 7mer-m8 dme-miR-252-5p 2L - 8117333 8117396 3'utr mon2 FlyBase G6869.1 GAATGTTAATCTTAGCCCTCCCTCGCATAGATGTAACGACTAAGCATCTATGTACTTACATACA 9 8117346 0.733078333 5 7 57 0.941176471 1.204119983 0.705882353 0.444444444 0.705882353 9 1 0 16 2L:8117333-8117396 7 6.5 713 FBgn0031985 610.5 12.61 19.26333333 0.010647011 0.515463918 0.337428621 1 1 1 0.15 dme-miR-1008-3p 7mer-m8 AGCTGTG 2L 8117463 8117469 - 2L_8117463_8117469_- 0.67164011 0.55117279 0.61140645 0.085183245 mon2 FBtr0339674|FBtr0301229 8117290|8116963 8117519|8117519 2L - 8117432 8117491 3'utr mon2 FlyBase G8844.1 AGTCCACATCCAGACTGGTGACAGCTGTGCGATGTTTTTCTTAGTTGTTTAAGCGCGAAC 6 8117459 0.929877148 4 6 37 1 0.954242509 0.333333333 0.5 0.666666667 6 0 0 9 2L:8117432-8117491 7 mon2 FBtr0339674|FBtr0301229 8117290|8116963 8117519|8117519 AGCTGTG 7mer-m8 dme-miR-1008-3p 2L - 8117455 8117556 stop_codon mon2 FlyBase G6870.2 AAACGACAATGTAATACAATCGAATGGACAAGAGTGAAAGTATGCCTAGACACAGACAGAGACCAAGTCCACATCCAGACTGGTGACAGCTGTGCGATGTTT 17 8117473 0.931438492 8 13 64 0.84375 1.130333768 0.4375 0.588235294 0.78125 17 4 1 27 2L:8117455-8117556 7 4 714 FBgn0031985 610.5 12.61 19.26333333 0.006552007 0.317208565 0.207648382 -10 4 -3 0.15 dme-miR-980-3p 8mer-A1 GGCAGCTA 2L 8133756 8133763 + 2L_8133756_8133763_+ 0.651917659 0.606054104 0.628985881 0.032430463 CG8668 FBtr0079576|FBtr0339671 8133642|8133642 8133989|8133989 2L + 8133461 8133862 stop_codon CG8668 FlyBase G2955.1 ACCACGGGCATAGTAGCCAAGAGCCTTAATGTTAAGCGGGTGCAGGCGAACGAGTTCGTTAACCGACGCATCTCATTTAACCCGTGCAACATCCGCAACGCAATCAGCGTGCACATGATCAAGTCGAACGAACAATTCGATTTGTGGAAAAAGCTGCTGGATCAGACCACCAAGTGTAAATAGTATTTTAAGTTTAGGGTGTAGTTTTTCCGGTATGAAGAACACAGTGTGGTCTTTCGAGAAAAAAGGGGCGAACATATATGTAATATGGTAGGAGTAGAGAATGATTAGCAAAGGCAGCTATATAGGATTATAAAATTAGACTAGTCTCTAAGTCCTAGAAATATCACAAATTCTGTTGTCGATCTCTGCATCCGCCTATATGCATGCGATCCAACAACG 527 8133748 0.899540704 58 483 3354 0.921221865 2.156094631 0.118971061 0.155597723 0.284565916 527 46 3 573 2L:8133461-8133862 8 CG8668 FBtr0079576|FBtr0339671 8133642|8133642 8133989|8133989 GGCAGCTA 8mer-A1 dme-miR-980-3p 2L + 8133704 8133880 3'utr CG8668 FlyBase G2342.2 AAAAGGGGCGAACATATATGTAATATGGTAGGAGTAGAGAATGATTAGCAAAGGCAGCTATATAGGATTATAAAATTAGACTAGTCTCTAAGTCCTAGAAATATCACAAATTCTGTTGTCGATCTCTGCATCCGCCTATATGCATGCGATCCAACAACGATTCGAGTACATTTTAAA 361 8133748 0.977729168 36 315 2289 0.897482014 1.795010559 0.120503597 0.376731302 0.595323741 361 50 7 499 2L:8133704-8133880 8 287.5 715 FBgn0031988 2594.666667 107.8333333 165.63 0.110804214 2.666151468 1.735796655 8 8 8 0.15 dme-miR-79-3p 7mer-A1 AGCTTTA 2L 8134398 8134404 - 2L_8134398_8134404_- 0.800715837 0.802636485 0.801676161 0.00135814 CG8552 FBtr0339673|FBtr0302595|FBtr0344863|FBtr0079641 8134245|8134245|8134245|8134245 8134622|8134622|8134622|8134622 2L - 8134308 8134424 3'utr CG8552 FlyBase G8873.1 AAAACCGTAGCAAGTTCTTGAGCTTTACAAAATTACCTATGTATTGATCGGATTGGCACCCATGAGACCTATTTGTTATTTTTGTAATATCGCCTGTGTAACAACTAACTTTGTAAC 37 8134406 0.971145721 11 36 275 0.979166667 1.672097858 0.104166667 0.243243243 0.416666667 37 1 0 47 2L:8134308-8134424 7 CG8552 FBtr0344863|FBtr0079641|FBtr0339673|FBtr0302595 8134245|8134245|8134245|8134245 8134622|8134622|8134622|8134622 AGCTTTA 7mer-A1 dme-miR-79-3p 2L - 8134305 8134424 3'utr CG8552 FlyBase G6888.1 AAAACCGTAGCAAGTTCTTGAGCTTTACAAAATTACCTATGTATTGATCGGATTGGCACCCATGAGACCTATTTGTTATTTTTGTAATATCGCCTGTGTAACAACTAACTTTGTAACATT 13 8134406 0.982793012 8 12 96 1 1.322219295 0.142857143 0.538461538 0.714285714 13 0 0 21 2L:8134305-8134424 7 13 716 FBgn0031990 1987.903333 36.46 55.94333333 0.006539553 0.356555129 0.232378002 2 2 2 0.15 dme-miR-1006-3p 6mer2-7 GAATTT 2L 818173 818178 - 2L_818173_818178_- 0.782342971 0.999955355 0.891149163 0.153875204 CG3876 FBtr0078039 818077 818506 2L - 818151 818218 3'utr CG3876 FlyBase G6658.1 TAGGAACAAGGCTTCAATAAGGTTTTATTTTATACGTACTGAATTTGCTTTTATTGGCTTCTAATGTT 10 818174 0.99356708 3 7 96 0.909090909 1 0.181818182 0.1 0.181818182 10 1 0 10 2L:818151-818218 6 CG3876 FBtr0078039 818077 818506 GAATTT 6mer2-7 dme-miR-1006-3p 2L - 818144 818240 3'utr CG3876 FlyBase G5207.1 ATTATTTATACACATACTCATTTAGGAACAAGGCTTCAATAAGGTTTTATTTTATACGTACTGAATTTGCTTTTATTGGCTTCTAATGTTCTAATTC 15 818174 0.987685901 10 14 154 0.958333333 1.06069784 0.041666667 0.533333333 0.708333333 15 0 1 23 2L:818144-818240 6 8 717 FBgn0031284 55.33333333 4.87 7.336666667 0.144578313 1.642710472 1.090413448 -4 -4 -4 0.15 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 818310 818317 - 2L_818310_818317_- 0.625284103 0.62530332 0.625293711 1.36E-05 CG3876 FBtr0078039 818077 818506 2L - 818272 818375 3'utr CG3876 FlyBase G6659.1 GAGGGATTCCGAGAGGAGACGATTCAGTATGACAGGATCTGATGCATACACACGCTTTTAGCTTTAGGCTCTAACACGATTTTACACCTAAAGGATCTAGTTAA 243 818318 0.985040237 14 236 1911 0.966666667 2.115610512 0.22962963 0.090534979 0.181481481 243 8 1 261 2L:818272-818375 8 CG3876 FBtr0078039 818077 818506 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 818270 818376 3'utr CG3876 FlyBase G5208.1 CGAGGGATTCCGAGAGGAGACGATTCAGTATGACAGGATCTGATGCATACACACGCTTTTAGCTTTAGGCTCTAACACGATTTTACACCTAAAGGATCTAGTTAAAT 183 818318 0.894220167 17 178 1423 0.977198697 2.176091259 0.159609121 0.459016393 0.67752443 183 6 1 300 2L:818270-818376 8 170.5 718 FBgn0031284 55.33333333 4.87 7.336666667 3.081325301 35.01026694 23.23943662 1 1 1 0.15 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 8189487 8189492 + 2L_8189487_8189492_+ 0.823910576 0.997776062 0.910843319 0.122941474 Piezo FBtr0335176|FBtr0335178|FBtr0335182|FBtr0335183|FBtr0335175|FBtr0335177|FBtr0335180|FBtr0335179|FBtr0335181 8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128 8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137 2L + 8189483 8189518 3'utr Piezo FlyBase G2997.1 ATAATGATGAAAACTCATATTCAGGGAATTTAGCAT 8 8189502 0.727504568 2 5 50 0.75 0.954242509 0.083333333 0.5 0.666666667 8 3 0 9 2L:8189483-8189518 6 Piezo FBtr0335181|FBtr0335179|FBtr0335180|FBtr0335177|FBtr0335175|FBtr0335183|FBtr0335182|FBtr0335178|FBtr0335176 8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128 8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L + 8189479 8189516 3'utr Piezo FlyBase G2368.1 AATAATAATGATGAAAACTCATATTCAGGGAATTTAGC 7 8189489 0.825528972 3 6 43 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 2L:8189479-8189516 6 6 719 FBgn0264953 3209.976667 41.34 63.05333333 0.001869172 0.145137881 0.095157539 -15 -2 -8.5 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 2L 8189774 8189779 + 2L_8189774_8189779_+ 0.992271349 0.998972494 0.995621922 0.004738464 Piezo FBtr0335176|FBtr0335178|FBtr0335182|FBtr0335183|FBtr0335175|FBtr0335177|FBtr0335180|FBtr0335179|FBtr0335181 8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128 8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137 2L + 8189749 8189814 3'utr Piezo FlyBase G3000.1 CGATACATATTGCATATATAGAGCGTTGACTTTAGTTTTAGGCATATCACTTGACATATTTTTGTA 95 8189774 0.989815296 11 91 899 0.981818182 1.73239376 0.054545455 0.136842105 0.254545455 95 1 1 108 2L:8189749-8189814 6 Piezo FBtr0335181|FBtr0335179|FBtr0335180|FBtr0335177|FBtr0335175|FBtr0335183|FBtr0335182|FBtr0335178|FBtr0335176 8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128 8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137 TTGACT 6mer3-8 dme-miR-1012-3p 2L + 8189724 8189796 3'utr Piezo FlyBase G2370.1 ACTGTTTACTACTATATAACTAAATCGATACATATTGCATATATAGAGCGTTGACTTTAGTTTTAGGCATATC 52 8189774 0.789974715 11 50 462 0.975 1.892094603 0.025 0.384615385 0.6 52 2 0 78 2L:8189724-8189796 6 68.5 720 FBgn0264953 3209.976667 41.34 63.05333333 0.021339719 1.656990808 1.086381899 0 0 0 0.15 dme-bantam-3p 6mer3-8 TGATCT 2L 8192604 8192609 - 2L_8192604_8192609_- 0.99317941 0.98509048 0.989134945 0.005719716 CG8475 FBtr0079639 8190952 8194921 2L - 8192578 8192638 5'utr CG8475 FlyBase G8910.1 ATCGAGCATCTTGACTTTATGAACCAAAGTGATCTGACCGACAACGAGAATGCGTTCTCGC 37 8192605 0.786975908 7 36 140 0.977777778 1.643452676 0.111111111 0.189189189 0.333333333 37 1 0 44 2L:8192578-8192638 6 CG8475 FBtr0079639 8190952 8194921 TGATCT 6mer3-8 dme-bantam-3p 2L - 8192590 8192627 5'utr CG8475 FlyBase G6907.1 TGACTTTATGAACCAAAGTGATCTGACCGACAACGAGA 25 8192606 0.922985833 4 23 82 1 1.62324929 0.023809524 0.4 0.642857143 25 0 0 42 2L:8192590-8192627 6 28 721 FBgn0031995 561.1466667 16.95666667 25.92 0.049897828 1.651267938 1.080246914 -4 -3 -3.5 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 2L 8200319 8200325 + 2L_8200319_8200325_+ 0.521215376 0.521011362 0.521113369 0.00014425 PGAP5 FBtr0079587 8200280 8200652 2L + 8200304 8200394 3'utr PGAP5 FlyBase G3007.1 AGGCATATCCTCTTTTGTGATTTACGCCTGATTGGGGCTTAGTTTAGACTAGATACGCCAGATTCCAGACTCAGATCCCAGATCCAGATCC 77 8200325 0.77869604 14 72 714 0.934782609 1.633468456 0.336956522 0.142857143 0.282608696 77 5 1 86 2L:8200304-8200394 7 PGAP5 FBtr0079587 8200280 8200652 TGTGATT 7mer-m1 dme-miR-308-3p 2L + 8200303 8200358 3'utr PGAP5 FlyBase G2375.1 AAGGCATATCCTCTTTTGTGATTTACGCCTGATTGGGGCTTAGTTTAGACTAGATA 53 8200325 0.712634575 12 50 479 0.942028986 1.335792102 0.434782609 0.264150943 0.434782609 53 2 2 65 2L:8200303-8200358 7 52.5 722 FBgn0031997 251.1233333 19.52 29.58 0.209060621 2.68954918 1.77484787 -6 -6 -6 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 8200491 8200498 - 2L_8200491_8200498_- 0.646474856 0.645359529 0.645917193 0.000788707 SLC5A11 FBtr0079637|FBtr0079637|FBtr0079637 8200463|8200463|8200463 8200884|8200884|8200884 2L - 8200474 8200605 3'utr SLC5A11 FlyBase G8915.1 CTTTACTTTCCAGCCTTTGTTCAAGCATTATTTTTTTGGCATTTTCGATTTGTAGTCAGCAGACTGTGTCTCATTATGTATTCCGTTTGACTTTACAAGCATAATGTCTGTGATAAATTCAATAAATAGATC 96 8200500 0.985436533 17 87 760 0.923728814 1.736396502 0.110169492 0.1875 0.338983051 96 8 1 109 2L:8200474-8200605 8 SLC5A11 FBtr0079637|FBtr0079637|FBtr0079637 8200463|8200463|8200463 8200884|8200884|8200884 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 8200482 8200518 3'utr SLC5A11 FlyBase G6910.1 TGACTTTACAAGCATAATGTCTGTGATAAATTCAATA 45 8200500 0.711099359 8 39 342 0.884057971 1.785329835 0.057971014 0.333333333 0.565217391 45 8 0 61 2L:8200482-8200518 8 60 723 FBgn0031998 248.32 11.31333333 17.32 0.241623711 5.303476724 3.464203233 2 2 2 0.15 dme-miR-184-5p 6mer3-8 TGATAA 2L 8209669 8209674 - 2L_8209669_8209674_- 0.997742434 0.997000776 0.997371605 0.00052439 Su(var)205 FBtr0079636|FBtr0079635 8209624|8209624 8209834|8209834 2L - 8209625 8209707 3'utr Su(var)205 FlyBase G8917.1 TCCATAAATGTCCAGAGTCAGTGTCTGTATTTATGATAACCATTTTCAATAAATAAAAAAAACCTTTATTCTGCTGGAGCCTA 18 8209664 0.676731094 12 18 127 1 1.431363764 0.333333333 0.333333333 0.555555556 18 0 0 27 2L:8209625-8209707 6 Su(var)205 FBtr0079635|FBtr0079636 8209624|8209624 8209834|8209834 TGATAA 6mer3-8 dme-miR-184-5p 2L - 8209625 8209688 3'utr Su(var)205 FlyBase G6914.1 AGTGTCTGTATTTATGATAACCATTTTCAATAAATAAAAAAAACCTTTATTCTGCTGGAGCCTA 10 8209676 0.98210971 6 10 75 1 1.176091259 0 0.4 0.6 10 0 0 15 2L:8209625-8209688 6 7.5 724 FBgn0003607 3176.68 396.8566667 605.5133333 0.002360955 0.018898511 0.012386185 -10 2 -4 0.15 dme-miR-14-3p 6mer2-7 AGACTG 2L 820991 820996 + 2L_820991_820996_+ 0.986889901 0.990625446 0.988757674 0.002641397 Clp FBtr0078011 820968 821209 2L + 820964 821017 stop_codon Clp FlyBase G895.1 AAGTAGGACGCTCTGCTCTGTATGATTAGACTGTAAGAGTGCAGAAATAAAGGT 13 820989 0.980649326 4 13 100 1 1.113943352 0.538461538 0 0 13 0 0 13 2L:820964-821017 6 Clp FBtr0078011 820968 821209 AGACTG 6mer2-7 dme-miR-14-3p 2L + 820964 821008 stop_codon Clp FlyBase G714.1 AAGTAGGACGCTCTGCTCTGTATGATTAGACTGTAAGAGTGCAGA 9 820989 0.976518707 3 9 64 1 1.113943352 0.384615385 0.444444444 0.615384615 9 0 0 13 2L:820964-821008 6 11 725 FBgn0015621 194.6666667 19.23666667 29.43666667 0.056506849 0.57182464 0.373683615 2 2 2 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 2L 821129 821135 + 2L_821129_821135_+ 0.619804826 0.620076138 0.619940482 0.000191838 Clp FBtr0078011 820968 821209 2L + 821046 821190 3'utr Clp FlyBase G896.1 AGTCCAGAGGTCGTAGGTTCCCAACTTCCGCAGGCGAACGTTTCAATCATTCTGTGTTTAAAGTGTATGTTAAGAAACTCATTTGCATTTTTGAAAAAAGTCCCTAGAACTGCCAGTAGAACGTATTGTGTTATCAGCGAAATAA 54 821128 0.839590949 13 49 388 0.915254237 1.255272505 0.338983051 0.092592593 0.169491525 54 3 2 54 2L:821046-821190 7 Clp FBtr0078011 820968 821209 TGCATTT 7mer-m8 dme-miR-277-3p 2L + 821049 821185 3'utr Clp FlyBase G715.1 CCAGAGGTCGTAGGTTCCCAACTTCCGCAGGCGAACGTTTCAATCATTCTGTGTTTAAAGTGTATGTTAAGAAACTCATTTGCATTTTTGAAAAAAGTCCCTAGAACTGCCAGTAGAACGTATTGTGTTATCAGCGA 44 821128 0.987021857 8 41 359 0.920634921 1.462397998 0.349206349 0.318181818 0.523809524 44 4 1 58 2L:821049-821185 7 21 726 FBgn0015621 194.6666667 19.23666667 29.43666667 0.107876712 1.091665223 0.713395991 1 1 1 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 2L 8218103 8218109 - 2L_8218103_8218109_- 0.615700906 0.612969365 0.614335136 0.001931462 Snx6 FBtr0079631|FBtr0306170 8218069|8218069 8218410|8218410 2L - 8218050 8218194 3'utr Snx6 FlyBase G8936.1 GTTTTGTGAACAGAGCGCTTTTATATTTGTCAAACAAGCATTCCTCTCTACAGCATAAACTACAACTACATATATTGTAAACACTTGCATTTGAAGCAGAATATAAACGAGAAATATTGTACAGAAGGCTGGCTGTTTGTGAGCA 85 8218110 0.928082335 17 81 538 0.981481481 1.548184611 0.12962963 0.2 0.37037037 85 0 2 106 2L:8218050-8218194 7 Snx6 FBtr0079631|FBtr0306170 8218069|8218069 8218410|8218410 TGCATTT 7mer-m8 dme-miR-277-3p 2L - 8218059 8218150 3'utr Snx6 FlyBase G6935.1 TCTCTACAGCATAAACTACAACTACATATATTGTAAACACTTGCATTTGAAGCAGAATATAAACGAGAAATATTGTACAGAAGGCTGGCTGT 39 8218110 0.95960387 6 34 240 0.886792453 1.371067862 0.075471698 0.333333333 0.509433962 39 5 1 47 2L:8218059-8218150 7 35 727 FBgn0032005 1985.913333 134.4066667 205.9133333 0.017624133 0.26040375 0.169974423 1 1 1 0.15 dme-miR-318-3p 6mer2-7 CCAGTG 2L 824367 824372 - 2L_824367_824372_- 0.743287458 0.999508247 0.871397853 0.181175394 CG3862 FBtr0078038 824327 824432 2L - 824353 824419 3'utr CG3862 FlyBase G6664.1 TTTTAGATTAGTTAACTTAAAGTATACTCTAGTCGAAAATACTATTGCCAGTGGCAGCCCAACCAAT 30 824393 0.978085751 9 25 174 0.80952381 0.753327667 0.047619048 0.2 0.428571429 30 3 5 34 2L:824353-824419 6 CG3862 FBtr0078038 824327 824432 CCAGTG 6mer2-7 dme-miR-318-3p 2L - 824355 824412 3'utr CG3862 FlyBase G5212.1 TTAGTTAACTTAAAGTATACTCTAGTCGAAAATACTATTGCCAGTGGCAGCCCAACCA 14 824375 0.978881592 8 11 79 0.826086957 0.977723605 0 0.5 0.695652174 14 3 1 19 2L:824355-824412 6 7.5 728 FBgn0031286 219 17.47666667 26.73666667 0.034246575 0.42914362 0.280513652 21 3 12 0.15 dme-miR-7-5p 6mer3-8 GTCTTC 2L 8258679 8258684 - 2L_8258679_8258684_- 0.987170641 0.962351581 0.974761111 0.017549683 Btk29A FBtr0112836 8258371 8260537 2L - 8258659 8258684 3'utr Btk29A FlyBase G8996.1 GTCTTCAAAGTGGCAGTGACATGTTG 28 8258674 0.74156704 3 22 143 0.806451613 0.795880017 0.838709677 0.107142857 0.193548387 28 3 3 25 2L:8258659-8258684 6 Btk29A FBtr0112836 8258371 8260537 GTCTTC 6mer3-8 dme-miR-7-5p 2L - 8258662 8258684 3'utr Btk29A FlyBase G6986.1 GTCTTCAAAGTGGCAGTGACATG 23 8258674 0.724213884 5 19 117 0.833333333 1.477121255 1 0.434782609 0.638888889 23 6 0 30 2L:8258662-8258684 6 25.5 729 FBgn0003502 699.44 22.40333333 34.31333333 0.036457738 1.138223479 0.74315135 -10 -10 -10 0.15 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2L 8259591 8259597 - 2L_8259591_8259597_- 0.808472611 0.808806078 0.808639344 0.00023582 Btk29A FBtr0330693|FBtr0330693|FBtr0330692|FBtr0330692|FBtr0079618|FBtr0079618|FBtr0079615|FBtr0079615|FBtr0112835|FBtr0112835|FBtr0112836|FBtr0112836|FBtr0079617|FBtr0079617 8259503|8259503|8259503|8259503|8258753|8258753|8259503|8259503|8259503|8259503|8258371|8258371|8259503|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537 2L - 8259578 8259607 3'utr Btk29A FlyBase G8997.1 ATGAACGTTTTACTTAATTAATTTTATCAT 9 8259599 0.818557822 2 9 112 1 1.041392685 0.636363636 0.222222222 0.363636364 9 0 0 11 2L:8259578-8259607 7 Btk29A FBtr0112836|FBtr0112836|FBtr0079617|FBtr0079617|FBtr0079615|FBtr0079615|FBtr0112835|FBtr0112835|FBtr0079618|FBtr0079618|FBtr0330693|FBtr0330693|FBtr0330692|FBtr0330692 8258371|8258371|8259503|8259503|8259503|8259503|8259503|8259503|8258753|8258753|8259503|8259503|8259503|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2L - 8259580 8259608 3'utr Btk29A FlyBase G6987.1 TATGAACGTTTTACTTAATTAATTTTATC 7 8259599 0.725815484 3 6 82 0.888888889 0.903089987 0.333333333 0.285714286 0.444444444 7 1 0 8 2L:8259580-8259608 7 8 730 FBgn0003502 699.44 22.40333333 34.31333333 0.011437722 0.357089719 0.233145522 2 2 2 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 2L 8259816 8259822 - 2L_8259816_8259822_- 0.520825418 0.521047197 0.520936307 0.000156836 Btk29A FBtr0330693|FBtr0330692|FBtr0079618|FBtr0079615|FBtr0112835|FBtr0112836|FBtr0079617 8259503|8259503|8258753|8259503|8259503|8258371|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537 2L - 8259790 8260037 3'utr Btk29A FlyBase G9000.1 GTGCTAAGTAAAATATGATTATCTCTAAAGAATGATAGAAACAAACAAACAAGAAAACTGATTATGCATTAAATATTAAATGTAAGCCTCAAGTCGAAAGCGAAATGTTTGCACAACTGATAAAGGATGAAGGAACCGAAGGATGATAAGAAAAGAGTTCGCCAAGAAACATAAACGATTTTTAGACTAGATTTGTACGTGCGTAGTTTAAGTTTTGTGATTTATTGTTTAATTCTTGCAGACGATTT 516 8259816 0.98641716 35 504 6584 0.968152866 1.938805539 0.643312102 0.158914729 0.308917197 516 14 6 608 2L:8259790-8260037 7 Btk29A FBtr0112836|FBtr0079617|FBtr0079615|FBtr0112835|FBtr0079618|FBtr0330693|FBtr0330692 8258371|8259503|8259503|8259503|8258753|8259503|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 8259778 8259865 3'utr Btk29A FlyBase G6988.1 AAACGATTTTTAGACTAGATTTGTACGTGCGTAGTTTAAGTTTTGTGATTTATTGTTTAATTCTTGCAGACGATTTTTATTTTTATTT 409 8259816 0.994162455 17 405 5327 0.988906498 2.318063335 0.703645008 0.393643032 0.606973059 409 5 2 624 2L:8259778-8259865 7 430.5 731 FBgn0003502 699.44 22.40333333 34.31333333 0.615492394 19.21589049 12.54614338 -6 -6 -6 0.15 dme-miR-277-3p 6mer3-8 TGCATT 2L 8260170 8260175 - 2L_8260170_8260175_- 0.541830277 0.575816699 0.558823488 0.024032014 Btk29A FBtr0330693|FBtr0330692|FBtr0079616|FBtr0079618|FBtr0079615|FBtr0112835|FBtr0112836|FBtr0079617 8259503|8259503|8260069|8258753|8259503|8259503|8258371|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537 2L - 8260134 8260233 3'utr Btk29A FlyBase G9001.1 ACGAAGCGCAACAACTGACAGTCACATATAGTAACTATATTAAATGAGAAAACGGAAATGCATTAAAGTATAGAGAACTGTAGTTAATAGTCAAATTTTT 57 8260171 0.938869596 10 55 223 0.984126984 1.792391689 0.349206349 0.105263158 0.19047619 57 1 0 62 2L:8260134-8260233 6 Btk29A FBtr0112836|FBtr0079617|FBtr0079615|FBtr0112835|FBtr0079616|FBtr0079618|FBtr0330693|FBtr0330692 8258371|8259503|8259503|8259503|8260069|8258753|8259503|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537 TGCATT 6mer3-8 dme-miR-277-3p 2L - 8260156 8260229 3'utr Btk29A FlyBase G6990.1 AGCGCAACAACTGACAGTCACATATAGTAACTATATTAAATGAGAAAACGGAAATGCATTAAAGTATAGAGAAC 48 8260171 0.961051709 5 41 189 0.855072464 1.469822016 0.275362319 0.333333333 0.536231884 48 9 1 59 2L:8260156-8260229 6 37.5 732 FBgn0003502 699.44 22.40333333 34.31333333 0.05361432 1.673858057 1.092869633 -4 -4 -4 0.15 dme-miR-283-5p 6mer3-8 TGATAT 2L 8260274 8260279 - 2L_8260274_8260279_- 0.998086806 0.999381652 0.998734229 0.000915633 Btk29A FBtr0330693|FBtr0330692|FBtr0079616|FBtr0079618|FBtr0079615|FBtr0112835|FBtr0112836|FBtr0079617 8259503|8259503|8260069|8258753|8259503|8259503|8258371|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537 2L - 8260242 8260307 3'utr Btk29A FlyBase G9002.1 TTATATGATAGAGCTAGAGCTGAGCAAATGATATCATTATGTTTATGAACGCGTTAACTGTTAGAC 108 8260279 0.854810623 10 103 726 0.953488372 1.788875116 0.255813953 0.157407407 0.294573643 108 5 1 123 2L:8260242-8260307 6 Btk29A FBtr0112836|FBtr0079617|FBtr0079615|FBtr0112835|FBtr0079616|FBtr0079618|FBtr0330693|FBtr0330692 8258371|8259503|8259503|8259503|8260069|8258753|8259503|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537 TGATAT 6mer3-8 dme-miR-283-5p 2L - 8260258 8260311 3'utr Btk29A FlyBase G6991.1 TGGATTATATGATAGAGCTAGAGCTGAGCAAATGATATCATTATGTTTATGAAC 69 8260279 0.8334676 9 66 433 0.91588785 1.088136089 0.392523364 0.405797101 0.61682243 69 2 7 98 2L:8260258-8260311 6 80.5 733 FBgn0003502 699.44 22.40333333 34.31333333 0.115092074 3.593215295 2.346026812 0 0 0 0.15 dme-miR-276a-3p 7mer-A1 GTTCCTA 2L 8316765 8316771 + 2L_8316765_8316771_+ 0.739224506 0.746468862 0.742846684 0.005122564 CG7806 FBtr0079600 8316672 8317011 2L + 8316735 8316784 3'utr CG7806 FlyBase G3042.1 ATTACTTTGTTTAATTTTTATCATACTTGTGTTCCTAACTAACAATTCCA 80 8316761 0.775187002 6 79 830 0.979166667 1.496006599 0 0.175 0.3125 80 0 2 94 2L:8316735-8316784 7 CG7806 FBtr0079600 8316672 8317011 GTTCCTA 7mer-A1 dme-miR-276a-3p 2L + 8316736 8316782 3'utr CG7806 FlyBase G2399.1 TTACTTTGTTTAATTTTTATCATACTTGTGTTCCTAACTAACAATTC 54 8316761 0.947220572 5 52 531 0.972972973 1.857332496 0 0.277777778 0.472972973 54 2 0 72 2L:8316736-8316782 7 66.5 734 FBgn0032018 954.6066667 23.09666667 35.38666667 0.069662199 2.879203348 1.879238885 4 4 4 0.15 dme-miR-304-5p 8mer-A1 TGAGATTA 2L 8317181 8317188 - 2L_8317181_8317188_- 0.624062906 0.592281175 0.60817204 0.022473056 mtsh FBtr0301169 8316887 8317538 2L - 8317171 8317225 stop_codon mtsh FlyBase G9035.1 TTCAACTATGAAATCTAAGTGAAAAAGTATTGACGGTTGAGATTATCAACTGAAA 11 8317188 0.742529854 5 10 65 0.923076923 1.079181246 0 0.090909091 0.230769231 11 1 0 12 2L:8317171-8317225 8 mtsh FBtr0301169|FBtr0301170 8316887|8316887 8317538|8317207 TGAGATTA 8mer-A1 dme-miR-304-5p 2L - 8317171 8317264 stop_codon mtsh FlyBase G7016.1 CAGTTTGATCACATCATGGGCAGGCCAGGCGAAAAGCTCTTCAACTATGAAATCTAAGTGAAAAAGTATTGACGGTTGAGATTATCAACTGAAA 13 8317189 0.970752231 6 11 72 1 1.204119983 0.25 0.230769231 0.375 13 0 0 16 2L:8317171-8317264 8 5 735 FBgn0262598 6.67 0.32 0.476666667 0.749625187 15.625 10.48951049 0 1 0.5 0.15 dme-bantam-3p 7mer-m8 TGATCTC 2L 8317316 8317322 - 2L_8317316_8317322_- 0.66123493 0.661332494 0.661283712 6.90E-05 mtsh FBtr0301169 8316887 8317538 2L - 8317293 8317351 3'utr mtsh FlyBase G9036.1 TACACGGACGAGAACCTCCTCTACTACATTGATCTCTACGAGCGCTCTGTGAACGACAT 298 8317323 0.965429051 10 291 2147 0.973760933 2.222716471 0.049562682 0.127516779 0.241982507 298 8 1 334 2L:8317293-8317351 7 mtsh FBtr0301169 8316887 8317538 TGATCTC 7mer-m8 dme-bantam-3p 2L - 8317290 8317349 3'utr mtsh FlyBase G7017.1 CACGGACGAGAACCTCCTCTACTACATTGATCTCTACGAGCGCTCTGTGAACGACATGCT 180 8317323 0.840018044 10 173 1259 0.962199313 2.447158031 0.06185567 0.405555556 0.632302405 180 11 0 280 2L:8317290-8317349 7 229.5 736 FBgn0262598 6.67 0.32 0.476666667 34.4077961 717.1875 481.4685315 1 1 1 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 832022 832028 + 2L_832022_832028_+ 0.658931477 0.65888522 0.658908348 3.27E-05 dock FBtr0332973|FBtr0078013|FBtr0078014|FBtr0078015 831922|831922|831922|831922 832331|833241|833241|833241 2L + 831979 832091 3'utr dock FlyBase G911.1 AACACACATATGCAACACAAAGATATACCAAGGCTAACTTGTAGGCAGCTCAGCTCAGCGCGACGTGTAGTTCAATATAGTTCGGTTTGGATATTTAATTATGGACTCAGTTT 38 832019 0.850271694 9 37 216 0.975609756 1.602059991 0.268292683 0.078947368 0.146341463 38 1 0 40 2L:831979-832091 7 dock FBtr0332973|FBtr0078013|FBtr0078014|FBtr0078015 831922|831922|831922|831922 832331|833241|833241|833241 GGCAGCT 7mer-m8 dme-miR-980-3p 2L + 831974 832042 3'utr dock FlyBase G727.1 TCAACAACACACATATGCAACACAAAGATATACCAAGGCTAACTTGTAGGCAGCTCAGCTCAGCGCGAC 13 832019 0.958801057 5 13 62 1 1.301029996 0.2 0.538461538 0.7 13 0 0 20 2L:831974-832042 7 17 737 FBgn0010583 684.1466667 22.6 34.75 0.024848473 0.752212389 0.489208633 3 3 3 0.15 dme-miR-283-5p 6mer3-8 TGATAT 2L 832694 832699 + 2L_832694_832699_+ 0.994557617 0.999994052 0.997275834 0.003844186 dock FBtr0078013|FBtr0078014|FBtr0078015 831922|831922|831922 833241|833241|833241 2L + 832675 832742 3'utr dock FlyBase G913.1 AAAACAAAACAAATACACTTGATATCTCCGCGCGGAGTCTGCTCCCCGCATTATTATAAACATAATCT 48 832694 0.861152199 7 46 247 0.966101695 1.755874856 0.084745763 0.229166667 0.372881356 48 2 0 57 2L:832675-832742 6 dock FBtr0078013|FBtr0078014|FBtr0078015 831922|831922|831922 833241|833241|833241 TGATAT 6mer3-8 dme-miR-283-5p 2L + 832675 832725 3'utr dock FlyBase G729.1 AAAACAAAACAAATACACTTGATATCTCCGCGCGGAGTCTGCTCCCCGCAT 27 832694 0.944894295 7 25 141 0.860465116 1.568201724 0.186046512 0.37037037 0.604651163 27 6 0 37 2L:832675-832725 6 30 738 FBgn0010583 684.1466667 22.6 34.75 0.043850247 1.327433628 0.863309353 0 0 0 0.15 dme-miR-980-5p 7mer-A1 AAAAACA 2L 833599 833605 - 2L_833599_833605_- 0.782903622 0.782911661 0.782907641 5.73E-06 drongo FBtr0302121|FBtr0302612|FBtr0078037|FBtr0302120 833582|833582|833585|833582 834544|834544|834544|834544 2L - 833595 833656 3'utr drongo FlyBase G6668.1 TGTCAAACATTATCGAAGCCTTAAAGTTATTTAAAACTACGAAATTTCAATAAAAACAAATA 14 833635 0.736506047 9 14 91 1 1.278753601 0.210526316 0.214285714 0.421052632 14 0 0 19 2L:833595-833656 7 drongo FBtr0078037|FBtr0302120|FBtr0302121|FBtr0302612 833585|833582|833582|833582 834544|834544|834544|834544 AAAAACA 7mer-A1 dme-miR-980-5p 2L - 833600 833657 3'utr drongo FlyBase G5214.1 GTGTCAAACATTATCGAAGCCTTAAAGTTATTTAAAACTACGAAATTTCAATAAAAAC 14 833612 0.75494106 8 14 85 1 1.447158031 0.178571429 0.642857143 0.821428571 14 0 0 28 2L:833600-833657 5 4 739 FBgn0020304 1071.886667 39.91333333 61.24666667 0.003731738 0.100217137 0.065309677 30 7 18.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 833930 833935 - 2L_833930_833935_- 0.94225584 0.978675664 0.960465752 0.025752758 drongo FBtr0302121|FBtr0302612|FBtr0078037|FBtr0302120 833582|833582|833585|833582 834544|834544|834544|834544 2L - 833876 833976 3'utr drongo FlyBase G6671.1 AGACACAGTTAGTACAGATACAGATATACATATACGCTTTTGTACCTAATGAATTGCTTCTTGTTTCCATTGCTAATCATCTGCTTTTCGTGTGCTAATTT 430 833936 0.68117376 18 422 3683 0.980988593 2.411619706 0.053231939 0.181395349 0.330798479 430 9 1 516 2L:833876-833976 6 drongo FBtr0078037|FBtr0302120|FBtr0302121|FBtr0302612 833585|833582|833582|833582 834544|834544|834544|834544 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L - 833910 834018 3'utr drongo FlyBase G5217.1 TATAACGTACGACTATACATATACGGATACAGATACAGATTCAGACACAGTTAGTACAGATACAGATATACATATACGCTTTTGTACCTAATGAATTGCTTCTTGTTTC 293 833936 0.852298231 18 281 2332 0.972157773 2.145092768 0.053364269 0.348122867 0.556844548 293 10 2 419 2L:833910-834018 6 342 740 FBgn0020304 1071.886667 39.91333333 61.24666667 0.319063583 8.568565225 5.583977359 1 1 1 0.15 dme-bantam-3p 6mer3-8 TGATCT 2L 8378334 8378339 - 2L_8378334_8378339_- 0.999709032 0.972388121 0.986048577 0.019318794 Aats-ala FBtr0079721|FBtr0079722 8378260|8378260 8378418|8378418 2L - 8378274 8378394 3'utr Aats-ala FlyBase G9076.1 AAGACCTTCAATTACTCACAATTTTGATACACAACTATGCTTAATCTTAATCCGTTGATCTGTTTTAAACAGCATTTCAGATGAATTTTTACGGCTATTTATAAAATAAAAGCATTTATAC 25 8378338 0.982779873 14 24 190 0.941176471 1.505149978 0.088235294 0.28 0.470588235 25 2 0 32 2L:8378274-8378394 6 Aats-ala FBtr0079722|FBtr0079721 8378260|8378260 8378418|8378418 TGATCT 6mer3-8 dme-bantam-3p 2L - 8378328 8378399 3'utr Aats-ala FlyBase G7040.1 GCGGCAAGACCTTCAATTACTCACAATTTTGATACACAACTATGCTTAATCTTAATCCGTTGATCTGTTTTA 13 8378369 0.984157154 7 13 103 1 1.278753601 0.210526316 0.307692308 0.526315789 13 0 0 19 2L:8378328-8378399 6 6 741 FBgn0027094 1216.56 46.45 71.26333333 0.004931939 0.129171152 0.084194771 -1 30 14.5 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 2L 8388308 8388314 + 2L_8388308_8388314_+ 0.521006335 0.520937339 0.520971837 4.88E-05 CG13384 FBtr0303469|FBtr0303468|FBtr0079655|FBtr0303470|FBtr0303467|FBtr0079658|FBtr0079653|FBtr0079657|FBtr0079654|FBtr0079656|FBtr0303471 8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134 8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804 2L + 8388119 8388333 stop_codon CG13384 FlyBase G3111.1 ACGACAGAACCCACTGAGTTTAATCGAAATAAGCGAATCGAAAACAGAACCTGGCTAGTTCTGCCTACAAATGTGTGCGAATTTATGACGAAGGCTTTATGTAGTTACACTCAGACTACGAATATGTTTACCATTAGTTGTTTACCATTTCCCAACTGGTATCGGTCCAGTCCAGTGGCGGTGCTTTAGTGTGATTAATTTATATTTATGGCAAA 396 8388304 0.959942088 39 386 2771 0.977505112 2.202306642 0.355828221 0.191919192 0.345603272 396 9 2 478 2L:8388119-8388333 7 CG13384 FBtr0303467|FBtr0079655|FBtr0303468|FBtr0303469|FBtr0303471|FBtr0303470|FBtr0079656|FBtr0079657|FBtr0079654|FBtr0079658|FBtr0079653 8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134 8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804 TGTGATT 7mer-m1 dme-miR-308-3p 2L + 8388267 8388329 3'utr CG13384 FlyBase G2454.2 TTCCCAACTGGTATCGGTCCAGTCCAGTGGCGGTGCTTTAGTGTGATTAATTTATATTTATGG 257 8388304 0.681702752 15 249 1796 0.97721519 2.10946605 0.432911392 0.373540856 0.592405063 257 7 2 386 2L:8388267-8388329 7 158 742 FBgn0032036 4208.186667 203.2133333 311 0.037545863 0.777508038 0.508038585 4 4 4 0.15 dme-miR-184-5p 6mer3-8 TGATAA 2L 8407982 8407987 + 2L_8407982_8407987_+ 0.885245854 0.994823792 0.940034823 0.077483276 emb FBtr0079663|FBtr0346708 8407923|8407923 8408853|8408280 2L + 8407914 8408016 stop_codon emb FlyBase G3150.1 AGGACGAATAGATGTCGATGTCGATGTCGATGTCACTGAGCTAGAATGTTTTAGTTGATGCTTGAGAATGATAAAAGGATGGTGATGTATGAGTGTTTCTCGA 28 8407993 0.982847339 12 25 189 0.9 1.431363764 0.233333333 0.071428571 0.133333333 28 3 0 27 2L:8407914-8408016 6 emb FBtr0079663|FBtr0346708 8407923|8407923 8408853|8408280 TGATAA 6mer3-8 dme-miR-184-5p 2L + 8407966 8408019 3'utr emb FlyBase G2490.1 AGTTGATGCTTGAGAATGATAAAAGGATGGTGATGTATGAGTGTTTCTCGAGCG 15 8407993 0.977319982 7 14 94 0.95 1.278753601 0.4 0.266666667 0.45 15 1 0 19 2L:8407966-8408019 6 16.5 743 FBgn0020497 2941.623333 79.20666667 121.6866667 0.005609148 0.208315798 0.135594149 -11 -11 -11 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 8412226 8412233 - 2L_8412226_8412233_- 0.498846268 0.498981711 0.49891399 9.57E-05 CG13398 FBtr0331990 8412142 8413550 2L - 8412158 8412255 3'utr CG13398 FlyBase G9111.1 ATGAATGTTCTTTCGTTTACATGTACTTAAAATCGCTGCTTAGTCGGCGGCATAAACTAAATTATTGTTAGTGTCTAAGACGAAATACGTGCAATAAA 207 8412234 0.989014861 8 201 1909 0.963855422 2.380211242 0.297188755 0.164251208 0.305220884 207 9 0 240 2L:8412158-8412255 8 CG13398 FBtr0331990 8412142 8413550 GTACTTAA 8mer-A1 dme-miR-252-5p 2L - 8412202 8412255 3'utr CG13398 FlyBase G7070.1 ATGAATGTTCTTTCGTTTACATGTACTTAAAATCGCTGCTTAGTCGGCGGCATA 164 8412234 0.813761594 5 149 1436 0.920704846 1.718086295 0.268722467 0.298780488 0.49339207 164 15 3 209 2L:8412202-8412255 8 183.5 744 FBgn0032042 445.3533333 18.47333333 28.30333333 0.412032394 9.933237099 6.483335296 1 1 1 0.15 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 8412354 8412360 - 2L_8412354_8412360_- 0.819751451 0.819928647 0.819840049 0.000125229 CG13398 FBtr0331990 8412142 8413550 2L - 8412341 8412400 3'utr CG13398 FlyBase G9113.1 AAAAAAAAACAATGGTAGAAAGCATCGCGTTGCATTGTCCGCTGTGAGTTTATAATTTTT 35 8412365 0.98317773 8 31 285 0.909090909 1.602059991 0.295454545 0.257142857 0.409090909 35 4 0 40 2L:8412341-8412400 7 CG13398 FBtr0331990 8412142 8413550 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L - 8412281 8412383 3'utr CG13398 FlyBase G7071.1 GAAAGCATCGCGTTGCATTGTCCGCTGTGAGTTTATAATTTTTTACATATATATATCGCTGAATTGTTATTCAATTTGTTAGGAGTTATATACACTGAGCATT 23 8412365 0.979078631 11 21 203 0.864864865 1.505149978 0.27027027 0.434782609 0.648648649 23 5 0 32 2L:8412281-8412383 7 22.5 745 FBgn0032042 445.3533333 18.47333333 28.30333333 0.050521683 1.217971851 0.794959369 5 5 5 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2L 8412803 8412809 - 2L_8412803_8412809_- 0.822976143 0.820039172 0.821507658 0.002076702 CG13398 FBtr0079710|FBtr0331990 8412409|8412142 8413550|8413550 2L - 8412799 8412860 3'utr CG13398 FlyBase G9116.1 CGAATTTACTGCACGAGATTGTGGTAAAGTGAAATTTGAAGAGTGATTTGTCCAAAGATATG 13 8412812 0.988896323 5 10 88 0.846153846 0.740362689 0.615384615 0.083333333 0.153846154 12 1 1 11 2L:8412799-8412860 7 CG13398 FBtr0331990|FBtr0079710 8412142|8412409 8413550|8413550 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 8412799 8412859 3'utr CG13398 FlyBase G7073.1 GAATTTACTGCACGAGATTGTGGTAAAGTGAAATTTGAAGAGTGATTTGTCCAAAGATATG 13 8412813 0.864836602 5 12 83 1 1.380211242 0.333333333 0.461538462 0.708333333 13 0 0 24 2L:8412799-8412859 7 8 746 FBgn0032042 445.3533333 18.47333333 28.30333333 0.017963265 0.433056658 0.28265222 3 4 3.5 0.15 dme-miR-8-3p 6mer2-7 AGTATT 2L 8437951 8437956 + 2L_8437951_8437956_+ 0.99426661 0.977258512 0.985762561 0.012026543 Chrac-14 FBtr0100268 8437890 8437996 2L + 8437910 8437966 3'utr Chrac-14 FlyBase G3178.1 ATACGGATCAATTATCCTCTTCAGTCATTAAGAACAAAGCTAGTATTGAGCATTAAC 15 8437929 0.69558085 6 15 107 1 1.397940009 0 0.266666667 0.56 15 0 0 25 2L:8437910-8437966 6 Chrac-14 FBtr0100268 8437890 8437996 AGTATT 6mer2-7 dme-miR-8-3p 2L + 8437917 8437967 3'utr Chrac-14 FlyBase G2515.1 TCAATTATCCTCTTCAGTCATTAAGAACAAAGCTAGTATTGAGCATTAACA 11 8437955 0.955922003 5 11 55 1 1.230448921 0 0.454545455 0.647058824 11 0 0 17 2L:8437917-8437967 6 7 747 FBgn0043002 655.4866667 147.0666667 225.6233333 0.010679088 0.047597461 0.03102516 22 -4 9 0.15 dme-miR-305-3p 6mer2-7 TGTGCC 2L 8446020 8446025 - 2L_8446020_8446025_- 0.918648254 0.919815275 0.919231764 0.000825194 U26 FBtr0089673|FBtr0340244|FBtr0340243 8445859|8445859|8445928 8446091|8448279|8446091 2L - 8445970 8446055 3'utr U26 FlyBase G9138.1 AACTTGTTGCTTAGCAGTAAGATAGAAAAGTGTGCCTGATTAAATACATTAATTTACAGAGGAATACAGAATTTACTTGTATAACT 90 8446025 0.975840022 6 90 570 1 2.008600172 0.058823529 0.122222222 0.225490196 90 0 0 102 2L:8445970-8446055 6 U26 FBtr0340243|FBtr0089673|FBtr0340244 8445928|8445859|8445859 8446091|8446091|8448279 TGTGCC 6mer2-7 dme-miR-305-3p 2L - 8446001 8446048 3'utr U26 FlyBase G7085.1 TGCTTAGCAGTAAGATAGAAAAGTGTGCCTGATTAAATACATTAATTT 56 8446025 0.893205478 3 54 353 0.971830986 1.537819095 0.154929577 0.232142857 0.394366197 56 1 1 69 2L:8446001-8446048 6 70 748 FBgn0027780 159.9633333 5.64 8.636666667 0.437600283 12.41134752 8.104978773 0 0 0 0.15 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 8449759 8449766 - 2L_8449759_8449766_- 0.625311622 0.62528558 0.625298601 1.84E-05 fu12 FBtr0079703|FBtr0302160|FBtr0079704|FBtr0340242 8449689|8449689|8449689|8449689 8450088|8450088|8450088|8450088 2L - 8449702 8449787 3'utr fu12 FlyBase G9139.1 TAAGCGCATTTGTTGGATGTTTAGCTTTATGCAAATATTGTATTGATTTATATGTGAATAATGAAATGAGACCTATTTAATAAAAC 60 8449767 0.79673289 15 59 543 0.977272727 1.934498451 0.136363636 0.3 0.522727273 60 2 0 86 2L:8449702-8449787 8 fu12 FBtr0079703|FBtr0302160|FBtr0079704|FBtr0340242 8449689|8449689|8449689|8449689 8450088|8450088|8450088|8450088 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 8449689 8449786 3'utr fu12 FlyBase G7086.1 AAGCGCATTTGTTGGATGTTTAGCTTTATGCAAATATTGTATTGATTTATATGTGAATAATGAAATGAGACCTATTTAATAAAACATTTTGCACTGAA 46 8449767 0.98977421 11 45 441 0.986842105 1.875061263 0.25 0.434782609 0.657894737 46 1 0 75 2L:8449689-8449786 8 40.5 749 FBgn0026718 82 6.056666667 9.28 0.493902439 6.68684645 4.364224138 1 1 1 0.15 dme-miR-184-3p 7mer-m8 TCCGTCC 2L 8490388 8490394 + 2L_8490388_8490394_+ 0.661615223 0.661615243 0.661615233 0 CG13088 FBtr0079681 8490347 8490546 2L + 8490368 8490403 3'utr CG13088 FlyBase G3203.1 AAATGACATTTCTACCTCAATCCGTCCGGTATACGA 16 8490388 0.724762169 4 14 112 0.894736842 1.230448921 0 0.1875 0.315789474 16 2 0 17 2L:8490368-8490403 7 CG13088 FBtr0079681 8490347 8490546 TCCGTCC 7mer-m8 dme-miR-184-3p 2L + 8490367 8490400 3'utr CG13088 FlyBase G2532.1 TAAATGACATTTCTACCTCAATCCGTCCGGTATA 22 8490397 0.699608806 5 19 149 0.875 1.322219295 0 0.090909091 0.166666667 22 3 0 21 2L:8490367-8490400 7 19 750 FBgn0032047 48.33333333 4.033333333 6.113333333 0.393103448 4.710743802 3.107960742 0 -9 -4.5 0.15 dme-miR-932-5p 6mer3-8 GGAATT 2L 8512258 8512263 - 2L_8512258_8512263_- 0.411914573 0.558327476 0.485121024 0.103529554 CG13097 FBtr0079697 8512172 8512592 2L - 8512223 8512282 3'utr CG13097 FlyBase G9162.1 AGGCACGCGTGCAGCTTGCGGAATTTGACTATTCTTAGAATTATTTACTTAAAATAACTG 14 8512250 0.982134883 7 14 112 1 1.176091259 0.333333333 0.071428571 0.133333333 14 0 0 15 2L:8512223-8512282 6 CG13097 FBtr0079697 8512172 8512592 GGAATT 6mer3-8 dme-miR-932-5p 2L - 8512245 8512286 3'utr CG13097 FlyBase G7103.1 GATTAGGCACGCGTGCAGCTTGCGGAATTTGACTATTCTTAG 11 8512266 0.93218008 5 10 50 0.941176471 1.204119983 0.294117647 0.363636364 0.588235294 11 1 0 16 2L:8512245-8512286 6 11 751 FBgn0032051 1042.693333 50.99 78.90333333 0.010549602 0.215728574 0.139411094 -13 3 -5 0.15 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2L 8525625 8525630 - 2L_8525625_8525630_- 0.966983866 0.965969374 0.96647662 0.00071736 lmgB FBtr0333420|FBtr0112744 8524997|8525551 8526861|8526861 2L - 8525604 8525647 3'utr lmgB FlyBase G9171.1 AAATCCACACGATCATATTTGACTGTTCTTTATTTCGTTATCAT 13 8525629 0.951911594 5 13 139 1 1.255272505 0.111111111 0.384615385 0.555555556 13 0 0 18 2L:8525604-8525647 6 lmgB FBtr0333420|FBtr0112744 8524997|8525551 8526861|8526861 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2L - 8525617 8525639 3'utr lmgB FlyBase G7107.1 ACGATCATATTTGACTGTTCTTT 9 8525628 0.73741131 3 8 86 0.916666667 0.740362689 0.583333333 0.222222222 0.416666667 9 0 1 11 2L:8525617-8525639 6 11 752 FBgn0085470 298.48 19.26 29.45666667 0.036853391 0.57113188 0.373429897 -1 -2 -1.5 0.15 dme-miR-283-5p 7mer-m8 TGATATT 2L 8526651 8526657 - 2L_8526651_8526657_- 0.440865017 0.620203579 0.530534298 0.12681154 lmgB FBtr0112745|FBtr0333420|FBtr0112744|FBtr0336886 8526603|8524997|8525551|8526603 8526861|8526861|8526861|8526861 2L - 8526637 8526684 3'utr lmgB FlyBase G9173.1 ATAAAGCTTGCCATGGTCCCTCGTTCTTGATATTGAATCTCGAAACAT 9 8526651 0.98506544 4 9 68 1 1 0 0.111111111 0.2 9 0 0 10 2L:8526637-8526684 7 lmgB FBtr0112745|FBtr0333420|FBtr0112744|FBtr0336886 8526603|8524997|8525551|8526603 8526861|8526861|8526861|8526861 TGATATT 7mer-m8 dme-miR-283-5p 2L - 8526634 8526663 3'utr lmgB FlyBase G7110.1 CGTTCTTGATATTGAATCTCGAAACATATG 5 8526657 0.951963129 3 5 39 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 2L:8526634-8526663 7 6.5 753 FBgn0085470 298.48 19.26 29.45666667 0.021777003 0.33748702 0.220663121 -6 0 -3 0.15 dme-miR-263a-5p 6mer3-8 GTGCCA 2L 8537640 8537645 + 2L_8537640_8537645_+ 0.814921902 0.766629108 0.790775505 0.034148166 CG17834 FBtr0079689|FBtr0079688|FBtr0333418 8537596|8537596|8537596 8537932|8537932|8537932 2L + 8537619 8537662 3'utr CG17834 FlyBase G3213.1 CAATGGGTACTAGCAGTATTTGTGCCAAAGATTGAGGAACTCTC 12 8537639 0.689971482 4 12 77 1 1.146128036 0.5 0.083333333 0.214285714 12 0 0 14 2L:8537619-8537662 6 CG17834 FBtr0333418|FBtr0079688|FBtr0079689 8537596|8537596|8537596 8537932|8537932|8537932 GTGCCA 6mer3-8 dme-miR-263a-5p 2L + 8537620 8537661 3'utr CG17834 FlyBase G2538.1 AATGGGTACTAGCAGTATTTGTGCCAAAGATTGAGGAACTCT 7 8537639 0.98098198 3 7 51 1 1.146128036 0.5 0.428571429 0.714285714 7 0 0 14 2L:8537620-8537661 6 9.5 754 FBgn0028394 84 8.063333333 12.40666667 0.113095238 1.178172799 0.765717356 1 1 1 0.15 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 8537707 8537712 + 2L_8537707_8537712_+ 0.990447773 0.985714416 0.988081095 0.003347019 CG17834 FBtr0079689|FBtr0079688|FBtr0333418 8537596|8537596|8537596 8537932|8537932|8537932 2L + 8537691 8537743 3'utr CG17834 FlyBase G3214.1 GACCAATATCGCCAAAATGTGACTTAATATTATTAACTAATTAGCTGTAAGTG 12 8537708 0.907910897 5 12 97 1 1.146128036 0.214285714 0.166666667 0.285714286 12 0 0 14 2L:8537691-8537743 6 CG17834 FBtr0333418|FBtr0079688|FBtr0079689 8537596|8537596|8537596 8537932|8537932|8537932 ATGTGA 6mer3-8 dme-miR-1003-3p 2L + 8537695 8537728 3'utr CG17834 FlyBase G2539.1 AATATCGCCAAAATGTGACTTAATATTATTAACT 9 8537709 0.87117889 2 6 65 0.909090909 0.698970004 0.363636364 0.222222222 0.363636364 9 0 1 10 2L:8537695-8537728 6 8 755 FBgn0028394 84 8.063333333 12.40666667 0.095238095 0.992145515 0.644814616 -1 -2 -1.5 0.15 dme-miR-276a-3p 6mer3-8 AGTTCC 2L 862082 862087 - 2L_862082_862087_- 0.692377644 0.695738839 0.694058241 0.002376727 aru FBtr0078032|FBtr0078031|FBtr0078033 861847|861847|861847 862165|862165|862165 2L - 861897 862161 3'utr aru FlyBase G6694.1 GAGATGCGATCACCATATACATATACACATATTCCGTAGTGAGGATCTAGCGTTATAGAGAGACAGACATCAGCAGTTCCGTCTAGGATGCTAGTCCTGGTCACTAGCGATCGGATTGGCTCCAATACCTTGCACTCGCTCGCAGGAGTGTGCAAACCAGAACTAACCTTAAGACTAACCTAAGTGGAGCTCCAGACGGGAGCTGTTGAGCAGCACGTGGCTCCTGCTGAGGCGGATGCTTAAGCTGATGCTCATCCAGGCGAAA 719 862085 0.982393128 32 703 5384 0.976771196 2.924795996 0.153310105 0.139082058 0.281068525 719 20 0 841 2L:861897-862161 6 aru FBtr0078031|FBtr0078033|FBtr0078032 861847|861847|861847 862165|862165|862165 AGTTCC 6mer3-8 dme-miR-276a-3p 2L - 862057 862137 3'utr aru FlyBase G5238.1 ACACATATTCCGTAGTGAGGATCTAGCGTTATAGAGAGACAGACATCAGCAGTTCCGTCTAGGATGCTAGTCCTGGTCACT 337 862085 0.984327967 9 322 2562 0.958333333 2.102090526 0.170454545 0.362017804 0.59280303 337 19 3 506 2L:862057-862137 6 491 756 FBgn0029095 923.38 37.84 58.14666667 0.531742078 12.9756871 8.444164183 -2 -2 -2 0.15 dme-miR-14-3p 6mer2-7 AGACTG 2L 8668152 8668157 + 2L_8668152_8668157_+ 0.999999975 0.99990346 0.999951718 6.82E-05 Sema-1a FBtr0303878|FBtr0303879|FBtr0329931|FBtr0303877|FBtr0329932 8666210|8664168|8664168|8666210|8666034 8672041|8670014|8671917|8671917|8670014 2L + 8668134 8668174 3'utr Sema-1a FlyBase G3219.1 ACATAGGGTTTGTATTATAGACTGGACGAACGGAGGGCAGA 9 8668149 0.992450258 3 4 49 0.454545455 0.698970004 0.454545455 0.111111111 0.272727273 9 6 0 5 2L:8668134-8668174 6 Sema-1a FBtr0303877|FBtr0329931|FBtr0303879|FBtr0303878|FBtr0329932 8666210|8664168|8664168|8666210|8666034 8671917|8671917|8670014|8672041|8670014 AGACTG 6mer2-7 dme-miR-14-3p 2L + 8668138 8668162 3'utr Sema-1a FlyBase G2545.1 AGGGTTTGTATTATAGACTGGACGA 5 8668149 0.729059413 2 4 32 0.857142857 0.77815125 0 0.2 0.428571429 5 1 0 6 2L:8668138-8668162 6 5.5 757 FBgn0011259 295.3333333 4.256666667 6.55 0.018623025 1.292090838 0.839694656 3 3 3 0.15 dme-miR-12-5p 7mer-A1 ATACTCA 2L 8668261 8668267 + 2L_8668261_8668267_+ 0.823190935 0.823258657 0.823224796 4.79E-05 Sema-1a FBtr0303878|FBtr0303879|FBtr0329931|FBtr0303877|FBtr0329932 8666210|8664168|8664168|8666210|8666034 8672041|8670014|8671917|8671917|8670014 2L + 8668202 8668285 3'utr Sema-1a FlyBase G3220.1 GGGGCATTGCTAATGTTGTTCTCATATTAAAGTATATTAGAAATAGGATAAGCTAATTGATACTCAATATTTTGTATGAGAAAC 22 8668259 0.990017337 5 21 208 0.96 1.380211242 0.12 0.090909091 0.2 22 1 0 24 2L:8668202-8668285 7 Sema-1a FBtr0303877|FBtr0329931|FBtr0303879|FBtr0303878|FBtr0329932 8666210|8664168|8664168|8666210|8666034 8671917|8671917|8670014|8672041|8670014 ATACTCA 7mer-A1 dme-miR-12-5p 2L + 8668202 8668282 3'utr Sema-1a FlyBase G2546.1 GGGGCATTGCTAATGTTGTTCTCATATTAAAGTATATTAGAAATAGGATAAGCTAATTGATACTCAATATTTTGTATGAGA 15 8668259 0.987158117 5 14 122 0.952380952 1.301029996 0.142857143 0.333333333 0.523809524 15 1 0 20 2L:8668202-8668282 7 16 758 FBgn0011259 295.3333333 4.256666667 6.55 0.054176072 3.75880971 2.442748092 2 2 2 0.15 dme-miR-307a-3p 6mer3-8 GGTTGT 2L 8685274 8685279 - 2L_8685274_8685279_- 0.999999729 0.999999999 0.999999864 2.12E-07 PrBP FBtr0079750 8684821 8685347 2L - 8685151 8685320 3'utr PrBP FlyBase G9186.1 TGATCGACCAGGTGTTCTCGCGTCCACCCACAAGTTTTTTTGGTTGTTCTTCAAGATGTTCTCTACAAAACATGCATACTTCGCTTTTGAGTACTTCAGCATTTCAATGCAATTGTTTGCGCGTTTATGAACTAGTTGTAGTCCAATGCATTTTAATCTAATCTAATTTT 52 8685263 0.977960038 23 51 475 0.983606557 1.77815125 0.262295082 0.173076923 0.295081967 52 1 0 60 2L:8685151-8685320 6 PrBP FBtr0079750 8684821 8685347 GGTTGT 6mer3-8 dme-miR-307a-3p 2L - 8685163 8685289 3'utr PrBP FlyBase G7120.1 AAGTTTTTTTGGTTGTTCTTCAAGATGTTCTCTACAAAACATGCATACTTCGCTTTTGAGTACTTCAGCATTTCAATGCAATTGTTTGCGCGTTTATGAACTAGTTGTAGTCCAATGCATTTTAATC 36 8685280 0.812420349 14 34 338 0.96 1.681241237 0.14 0.305555556 0.5 36 2 0 48 2L:8685163-8685289 6 17 759 FBgn0032059 209.34 22.80333333 34.73333333 0.081207605 0.745505043 0.489443378 -16 1 -7.5 0.15 dme-miR-276a-3p 6mer3-8 AGTTCC 2L 8710413 8710418 - 2L_8710413_8710418_- 0.999949911 0.999979107 0.999964509 2.06E-05 raw FBtr0340231|FBtr0303868|FBtr0079746|FBtr0340232|FBtr0079745 8709878|8709878|8709878|8709878|8709878 8710434|8710434|8710434|8710434|8710434 2L - 8710398 8710458 stop_codon raw FlyBase G9211.1 TACAACAACCGCGACCGCTGCTAAATCGTACCTGTATTTAAGTTCCAGCACGTGACAATTT 70 8710423 0.985328005 10 65 537 0.933333333 1.84509804 0.293333333 0.057142857 0.12 70 5 0 70 2L:8710398-8710458 6 raw FBtr0340232|FBtr0079745|FBtr0303868|FBtr0079746|FBtr0340231 8709878|8709878|8709878|8709878|8709878 8710434|8710434|8710434|8710434|8710434 AGTTCC 6mer3-8 dme-miR-276a-3p 2L - 8710394 8710457 stop_codon raw FlyBase G7144.1 ACAACAACCGCGACCGCTGCTAAATCGTACCTGTATTTAAGTTCCAGCACGTGACAATTTAAGC 41 8710422 0.986824969 9 37 318 0.815384615 1.72427587 0.153846154 0.390243902 0.615384615 41 12 0 53 2L:8710394-8710457 6 8.5 760 FBgn0003209 722.0533333 20.74666667 31.84333333 0.011771984 0.40970437 0.266931854 5 4 4.5 0.15 dme-miR-14-3p 7mer-m8 AAGACTG 2L 876828 876834 + 2L_876828_876834_+ 0.671341577 0.671336327 0.671338952 3.75E-06 PNUTS FBtr0091489|FBtr0332000 876736|876736 877038|877038 2L + 876801 876854 3'utr PNUTS FlyBase G935.3 AGATTTCCGAAATCGAGTCCCCACATGAAGACTGTATCCAGGTTAGCCGCCGCA 328 876826 0.890271768 7 319 1537 0.9765625 2.096910013 0.111979167 0.131097561 0.2578125 328 7 2 375 2L:876801-876854 7 PNUTS FBtr0332000|FBtr0091489 876736|876736 877038|877038 AAGACTG 7mer-m8 dme-miR-14-3p 2L + 876736 876876 stop_codon PNUTS FlyBase G753.1 AGGACCTACCCGAATCTTCTGCGGAAGATTCAGCTGCATAGATCTCAGACGCGCAACGGAGGCCAAGATTTCCGAAATCGAGTCCCCACATGAAGACTGTATCCAGGTTAGCCGCCGCAAGTTAATCTAAGTGTATATATG 197 876826 0.960188933 16 181 895 0.932659933 1.965358514 0.131313131 0.355329949 0.572390572 197 18 2 277 2L:876736-876876 7 247.5 761 FBgn0053526 1548.73 47.96666667 73.53 0.159808359 5.159833218 3.365973072 2 2 2 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 8829076 8829082 + 2L_8829076_8829082_+ 0.801906719 0.801901601 0.80190416 3.61E-06 SoxN FBtr0330210|FBtr0330210|FBtr0330210|FBtr0079733|FBtr0079733|FBtr0079733 8828778|8828778|8828778|8828211|8828211|8828211 8829670|8829670|8829670|8829670|8829670|8829670 2L + 8828888 8829143 3'utr SoxN FlyBase G3269.1 TCGAATTTCGAAGTGGCAGAGTAACACATGCGCATATAAATAAATGAGAATAGGATTAATGTTTAGTCATTTAAATGATGCATACGCACTGTTGTACCACAATAGTAAGATGACAACTCACTTGCATTCCATACCGTTCTGCTTCGATTTCCCTTGATTTCCCGCTTGTTGCATAGCTAAAACAATTGTGTGATACAAATAAACTGTTGCCAATTACGGGGACAACGGCAACAACAACAAATTCGTTTGGTTTAGC 161 8829074 0.974663391 25 153 954 0.954773869 1.579783597 0.070351759 0.180124224 0.336683417 161 5 4 190 2L:8828888-8829143 7 SoxN FBtr0330210|FBtr0330210|FBtr0330210|FBtr0079733|FBtr0079733|FBtr0079733 8828778|8828778|8828778|8828211|8828211|8828211 8829670|8829670|8829670|8829670|8829670|8829670 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 8829032 8829122 3'utr SoxN FlyBase G2583.3 CGATTTCCCTTGATTTCCCGCTTGTTGCATAGCTAAAACAATTGTGTGATACAAATAAACTGTTGCCAATTACGGGGACAACGGCAACAAC 68 8829074 0.969964895 8 64 382 0.969072165 1.973127854 0.020618557 0.323529412 0.525773196 68 3 0 94 2L:8829032-8829122 7 84.5 762 FBgn0029123 4.333333333 0.126666667 0.19 19.5 667.1052632 444.7368421 2 2 2 0.15 dme-miR-970-3p 7mer-m8 TCTTATG 2L 8829333 8829339 + 2L_8829333_8829339_+ 0.641541189 0.646758658 0.644149924 0.00368933 SoxN FBtr0330210|FBtr0079733 8828778|8828211 8829670|8829670 2L + 8829221 8829355 3'utr SoxN FlyBase G3271.1 GACGCGGAATCAAGCACAAGTTTAGTAGGAGTAAAGGCAGTTGTGGCGAGGCGATGAAAATATTTCAGAAAAGCAAAGAAAAATGTCAAAAAACATTCTATTTTATAAATTCTCTTATGCATTAAGTAATTATAA 42 8829335 0.990102542 11 40 382 0.943396226 1.698970004 0.245283019 0.238095238 0.396226415 42 3 0 50 2L:8829221-8829355 7 SoxN FBtr0330210|FBtr0079733 8828778|8828211 8829670|8829670 TCTTATG 7mer-m8 dme-miR-970-3p 2L + 8829315 8829349 3'utr SoxN FlyBase G2585.1 ATTCTATTTTATAAATTCTCTTATGCATTAAGTAA 24 8829335 0.757241616 3 24 249 1 1.544068044 0.314285714 0.333333333 0.542857143 24 0 0 35 2L:8829315-8829349 7 28 763 FBgn0029123 4.333333333 0.126666667 0.19 6.461538462 221.0526316 147.3684211 -2 -2 -2 0.15 dme-bantam-3p 6mer3-8 TGATCT 2L 8953627 8953632 - 2L_8953627_8953632_- 0.911422622 0.917261924 0.914342273 0.004129009 CG31886 FBtr0079787|FBtr0113029|FBtr0303885 8953479|8953479|8953479 8954021|8954021|8954021 2L - 8953513 8953806 3'utr CG31886 FlyBase G9261.1 GAATGTAGCCTAAGACGCAAGCATTTTTTGGTCTACAAATGAAAATGGGAAAATAGTAAGATAAAATATGTAAATTGTATATCGTGTACAAATAAATGTAGATACCAAGTAATTTTAAGATGAAATTGTAGTACTTATCAATTAATTCAATTATTCTCATTTTATAAACGACTTTGATCTTTTTGTTTACCTGAACACATTTTAAAGACAATTCTTATGTAGTCATTTGAAGAGGATTAGTTTTAATGCTTTTGTTGACTTTGTATAAGTGATTTGAATTTTAAGGAAATTTTC 969 8953624 0.831691 75 931 9074 0.963288109 1.905616011 0.106145251 0.226006192 0.401436552 969 32 14 1207 2L:8953513-8953806 6 CG31886 FBtr0303885|FBtr0113029|FBtr0079787 8953479|8953479|8953479 8954021|8954021|8954021 TGATCT 6mer3-8 dme-bantam-3p 2L - 8953513 8953805 3'utr CG31886 FlyBase G7179.1 AATGTAGCCTAAGACGCAAGCATTTTTTGGTCTACAAATGAAAATGGGAAAATAGTAAGATAAAATATGTAAATTGTATATCGTGTACAAATAAATGTAGATACCAAGTAATTTTAAGATGAAATTGTAGTACTTATCAATTAATTCAATTATTCTCATTTTATAAACGACTTTGATCTTTTTGTTTACCTGAACACATTTTAAAGACAATTCTTATGTAGTCATTTGAAGAGGATTAGTTTTAATGCTTTTGTTGACTTTGTATAAGTGATTTGAATTTTAAGGAAATTTTC 741 8953623 0.817424036 78 711 7034 0.960637301 1.96933118 0.11715089 0.326585695 0.532333646 741 32 10 1025 2L:8953513-8953805 6 526 764 FBgn0032079 1123.893333 53.47 82.11333333 0.468015945 9.837291939 6.405780628 -8 -9 -8.5 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 2L 8970040 8970046 + 2L_8970040_8970046_+ 0.704757072 0.608488083 0.656622577 0.068072463 CG18088 FBtr0332187|FBtr0079759 8970025|8970025 8970627|8970259 2L + 8970028 8970072 3'utr CG18088 FlyBase G3294.1 TAAGTCTCTTATGTACAAAATAAAGTTTAAGTTTAGTTTAAAACT 48 8970038 0.679852743 7 43 378 0.893939394 1.16879202 0.045454545 0.3125 0.5 48 4 3 59 2L:8970028-8970072 7 CG18088 FBtr0079759|FBtr0332187 8970025|8970025 8970259|8970627 GTACAAA 7mer-A1 dme-miR-305-5p 2L + 8970029 8970060 3'utr CG18088 FlyBase G2604.1 AAGTCTCTTATGTACAAAATAAAGTTTAAGTT 14 8970037 0.657229584 3 12 100 0.857142857 0.77815125 0.19047619 0.428571429 0.619047619 14 1 2 18 2L:8970029-8970060 7 30.5 765 FBgn0032082 216 12.59666667 19.19 0.141203704 2.42127547 1.589369463 2 3 2.5 0.15 dme-miR-8-3p 6mer2-7 AGTATT 2L 8977904 8977909 - 2L_8977904_8977909_- 0.997980783 0.997112921 0.997546852 0.000613698 CG13101 FBtr0079784 8977832 8978041 2L - 8977855 8977924 3'utr CG13101 FlyBase G9274.1 AAATTCGTTCTGCGGAGTATTGTTGCTTAACGGCATTTGAAGGTAAAACCCGGTCTATGTCCTTCGGCGG 12 8977904 0.988786317 7 12 110 1 1.113943352 0.153846154 0.083333333 0.153846154 12 0 0 13 2L:8977855-8977924 6 CG13101 FBtr0079784 8977832 8978041 AGTATT 6mer2-7 dme-miR-8-3p 2L - 8977857 8977924 3'utr CG13101 FlyBase G7194.1 AAATTCGTTCTGCGGAGTATTGTTGCTTAACGGCATTTGAAGGTAAAACCCGGTCTATGTCCTTCGGC 9 8977903 0.987188654 7 9 79 1 1.176091259 0.066666667 0.333333333 0.6 9 0 0 15 2L:8977857-8977924 6 8 766 FBgn0032084 10 0.853333333 1.306666667 0.8 9.375 6.12244898 -5 -6 -5.5 0.15 dme-miR-932-5p 7mer-m8 GGAATTG 2L 8986006 8986012 - 2L_8986006_8986012_- 0.695908007 0.70227067 0.699089339 0.004499108 rost FBtr0079782|FBtr0331454|FBtr0331453 8985934|8985934|8985934 8986340|8986340|8986340 2L - 8985971 8986023 3'utr rost FlyBase G9283.1 AAAAGAATAATGGAATTGTATTAAAATATATCACGAATATCAAAAGTGGAAAG 11 8986013 0.985048824 3 10 80 0.916666667 1.041392685 0.166666667 0.090909091 0.166666667 11 1 0 11 2L:8985971-8986023 7 rost FBtr0079782|FBtr0331454|FBtr0331453 8985934|8985934|8985934 8986340|8986340|8986340 GGAATTG 7mer-m8 dme-miR-932-5p 2L - 8985978 8986023 3'utr rost FlyBase G7201.1 AAAAGAATAATGGAATTGTATTAAAATATATCACGAATATCAAAAG 11 8986013 0.984349602 3 9 69 0.875 1.146128036 0.0625 0.272727273 0.5 11 2 0 14 2L:8985978-8986023 7 9 767 FBgn0011705 1154.336667 95.13666667 145.5366667 0.007796686 0.09460075 0.061840086 1 1 1 0.15 dme-miR-276a-3p 6mer2-7 GTTCCT 2L 8986140 8986145 - 2L_8986140_8986145_- 0.999967226 0.587439702 0.793703464 0.291700993 rost FBtr0079782|FBtr0331454|FBtr0331453 8985934|8985934|8985934 8986340|8986340|8986340 2L - 8986035 8986328 3'utr rost FlyBase G9284.1 AACAAAAAGTCATTGAATATCACCTCATGGGCACCCGCACGTATACCATGTTCTTATATGCATTGCCAGCATTATGTAACTCCCATTAACAAATCCATCCAAAAACGACACTGAAAAGGGAGTCGCACACTTGCATGCATTTATTTATATCTAGTATTTCATATTGTAAGTTTTAATCATTTGGTTCCTTAACATTGAATTGGTTTAGTTAGGTTAATTCTTATACATTATGTTGTTATTACATATTTGGTTTAAATAGTATAAATATGAAATTTGTTGAAAATACTCTACCCA 154 8986147 0.985070251 38 140 1141 0.91160221 1.916453949 0.116022099 0.149350649 0.276243094 154 15 1 165 2L:8986035-8986328 6 rost FBtr0079782|FBtr0331454|FBtr0331453 8985934|8985934|8985934 8986340|8986340|8986340 GTTCCT 6mer2-7 dme-miR-276a-3p 2L - 8986108 8986166 3'utr rost FlyBase G7202.1 ATTGTAAGTTTTAATCATTTGGTTCCTTAACATTGAATTGGTTTAGTTAGGTTAATTCT 23 8986147 0.982498722 5 18 216 0.891891892 1.51851394 0 0.545454545 0.72972973 22 4 0 33 2L:8986108-8986166 6 27 768 FBgn0011705 1154.336667 95.13666667 145.5366667 0.023390057 0.283802249 0.185520258 2 2 2 0.15 dme-miR-79-3p 7mer-A1 AGCTTTA 2L 9163658 9163664 + 2L_9163658_9163664_+ 0.746371695 0.745833897 0.746102796 0.000380282 CG32982 FBtr0110960|FBtr0301039|FBtr0330218|FBtr0079771|FBtr0303888|FBtr0301040|FBtr0330219 9163162|9163162|9163463|9163448|9163448|9163162|9163448 9163721|9163721|9163721|9163716|9163721|9163721|9163721 2L + 9163627 9163663 3'utr CG32982 FlyBase G3309.1 TAGTACTCGTAGTGTGTGTGCTCCAATGTCCAGCTTT 14 9163645 0.690710413 5 13 99 0.933333333 0.84509804 0.066666667 0.071428571 0.133333333 14 0 1 14 2L:9163627-9163663 6 CG32982 FBtr0079771|FBtr0330218|FBtr0301039|FBtr0110960|FBtr0330219|FBtr0301040|FBtr0303888 9163448|9163463|9163162|9163162|9163448|9163162|9163448 9163716|9163721|9163721|9163721|9163721|9163721|9163721 AGCTTTA 7mer-A1 dme-miR-79-3p 2L + 9163617 9163679 3'utr CG32982 FlyBase G2609.1 AACTATGTAGTAGTACTCGTAGTGTGTGTGCTCCAATGTCCAGCTTTATGTAAATGTTTAAAT 13 9163644 0.977906816 6 12 115 0.947368421 1.255272505 0.052631579 0.384615385 0.578947368 13 1 0 18 2L:9163617-9163679 7 6.5 769 FBgn0052982 930.23 36.84 56.35333333 0.006987519 0.176438654 0.115343665 13 14 13.5 0.15 dme-miR-31a-5p 6mer3-8 TCTTGC 2L 9245858 9245863 + 2L_9245858_9245863_+ 0.872125066 0.866057835 0.869091451 0.004290229 tai FBtr0333405|FBtr0303872|FBtr0303871|FBtr0303873|FBtr0304974|FBtr0303870 9245807|9245807|9245807|9245807|9245807|9245807 9247186|9247186|9247186|9250211|9250211|9247186 2L + 9245819 9245897 3'utr tai FlyBase G3332.1 CCTAGTTCAGAACCAAGGATCACGTACAACCAAAACTTCTCTTGCGCACGCATTTATGGCTCTAGATACGAAAAACAAT 26 9245874 0.975721882 12 25 157 0.96969697 1.204119983 0.060606061 0.115384615 0.303030303 26 0 1 32 2L:9245819-9245897 6 tai FBtr0304974|FBtr0303870|FBtr0303871|FBtr0303873|FBtr0333405|FBtr0303872 9245807|9245807|9245807|9245807|9245807|9245807 9250211|9247186|9247186|9250211|9247186|9247186 TCTTGC 6mer3-8 dme-miR-31a-5p 2L + 9245832 9245885 3'utr tai FlyBase G2628.1 CAAGGATCACGTACAACCAAAACTTCTCTTGCGCACGCATTTATGGCTCTAGAT 12 9245860 0.970394221 6 12 70 1 1.255272505 0.222222222 0.333333333 0.555555556 12 0 0 18 2L:9245832-9245885 6 14.5 770 FBgn0041092 2562.806667 37.60666667 57.55666667 0.005657859 0.385569934 0.251925639 -16 -2 -9 0.15 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 9246846 9246851 + 2L_9246846_9246851_+ 0.999673119 0.999933946 0.999803532 0.000184413 tai FBtr0333405|FBtr0303872|FBtr0303871|FBtr0303873|FBtr0304974|FBtr0303870 9245807|9245807|9245807|9245807|9245807|9245807 9247186|9247186|9247186|9250211|9250211|9247186 2L + 9246808 9246874 3'utr tai FlyBase G3340.1 AAGCAAAGCGCGCAAAGCAAAGTTGGCGTTGCAATTTCATGTGAAGGCTATTTTACAGGTTTTGTTT 94 9246849 0.988618154 11 92 856 0.974358974 1.579783597 0.051282051 0.180851064 0.341880342 94 1 2 114 2L:9246808-9246874 6 tai FBtr0304974|FBtr0303870|FBtr0303871|FBtr0303873|FBtr0333405|FBtr0303872 9245807|9245807|9245807|9245807|9245807|9245807 9250211|9247186|9247186|9250211|9247186|9247186 ATGTGA 6mer3-8 dme-miR-1003-3p 2L + 9246822 9246871 3'utr tai FlyBase G2635.1 AAGCAAAGTTGGCGTTGCAATTTCATGTGAAGGCTATTTTACAGGTTTTG 47 9246849 0.843664743 7 47 435 1 1.832508913 0.073529412 0.340425532 0.544117647 47 0 0 68 2L:9246822-9246871 6 68 771 FBgn0041092 2562.806667 37.60666667 57.55666667 0.02653341 1.808190037 1.181444374 -3 -3 -3 0.15 dme-bantam-3p 6mer3-8 TGATCT 2L 9331906 9331911 + 2L_9331906_9331911_+ 0.781680896 0.707847518 0.744764207 0.052208098 Cks30A FBtr0079799 9331350 9331981 2L + 9331816 9331928 3'utr Cks30A FlyBase G3348.1 ATTTTATCATACTTTATGTTGCCATTTCGAAACGGAAGCGAAAAGAAGAATTTTGCTCACTTCTTTTAAGCTTAAATGAAATCTGATTTGTGATCTTGAAATTTTTAATCAAT 198 9331902 0.89813824 16 190 1752 0.965779468 1.705863712 0.326996198 0.247474747 0.433460076 198 5 4 254 2L:9331816-9331928 6 Cks30A FBtr0079799 9331350 9331981 TGATCT 6mer3-8 dme-bantam-3p 2L + 9331880 9331925 3'utr Cks30A FlyBase G2643.1 TTTAAGCTTAAATGAAATCTGATTTGTGATCTTGAAATTTTTAATC 140 9331902 0.68933827 7 135 1233 0.961722488 2.303196057 0.320574163 0.35 0.564593301 140 8 0 201 2L:9331880-9331925 6 160 772 FBgn0010314 382.0366667 41.23 63.10666667 0.418807968 3.880669415 2.535389816 4 4 4 0.15 dme-miR-8-3p 7mer-A1 AGTATTA 2L 9435242 9435248 + 2L_9435242_9435248_+ 0.821510096 0.823298269 0.822404183 0.001264448 scat FBtr0079809 9434914 9435341 2L + 9435200 9435266 3'utr scat FlyBase G3372.1 TGCGTACAAATCAATGGCGGTAAACGATTCCCTTGTTCCTTTAGTATTATTATCGTTAGCTGGATTT 46 9435240 0.92517206 10 46 453 1 1.73239376 0.314814815 0.173913043 0.296296296 46 0 0 54 2L:9435200-9435266 7 scat FBtr0079809 9434914 9435341 AGTATTA 7mer-A1 dme-miR-8-3p 2L + 9435183 9435261 3'utr scat FlyBase G2670.1 TAATCAACAAATTTCAATGCGTACAAATCAATGGCGGTAAACGATTCCCTTGTTCCTTTAGTATTATTATCGTTAGCTG 27 9435240 0.989730428 8 26 253 1 1.653212514 0.244444444 0.555555556 0.733333333 27 0 0 45 2L:9435183-9435261 7 30 773 FBgn0011232 207.99 7.106666667 10.93333333 0.144237704 4.221388368 2.743902439 2 2 2 0.15 dme-miR-965-3p 7mer-m8 TACGCTT 2L 9491617 9491623 - 2L_9491617_9491623_- 0.603049838 0.5973994 0.600224619 0.003995436 Gdi FBtr0306169|FBtr0345433 9491174|9491174 9492083|9492083 2L - 9491590 9491638 3'utr Gdi FlyBase G9312.1 AGTCAGTCAGACGATTACGCTTGGACTTTAGTTGTACGAGTATATAATA 47 9491624 0.887719025 6 46 352 0.980769231 1.40654018 0.057692308 0.106382979 0.192307692 47 0 1 51 2L:9491590-9491638 7 Gdi FBtr0345433|FBtr0306169 9491174|9491174 9492083|9492083 TACGCTT 7mer-m8 dme-miR-965-3p 2L - 9491598 9491636 3'utr Gdi FlyBase G7222.1 TCAGTCAGACGATTACGCTTGGACTTTAGTTGTACGAGT 28 9491624 0.889160597 4 28 217 1 1.612783857 0.073170732 0.392857143 0.585365854 28 0 0 41 2L:9491598-9491636 7 37 774 FBgn0004868 1474.943333 78.36666667 119.7266667 0.02508571 0.472139515 0.309037252 1 1 1 0.15 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 2L 9492052 9492057 - 2L_9492052_9492057_- 0.843257056 0.973335796 0.908296426 0.091979531 Gdi FBtr0306169|FBtr0345433|FBtr0079862 9491174|9491174|9491934 9492083|9492083|9492083 2L - 9491957 9492073 3'utr Gdi FlyBase G9313.1 AGGCCTCATCTGGTTATGGTGCATTTGGACAGCTCAACATCAGCCACAAACATCGTAGATCGTCTCAGCGTCGTGGCCAAACCTTAAAAAAAAAAATACCCAAGATAAGAAAACCCA 48 9492049 0.98541852 13 48 228 1 1.72427587 0.113207547 0.104166667 0.188679245 48 0 0 53 2L:9491957-9492073 6 Gdi FBtr0345433|FBtr0079862|FBtr0306169 9491174|9491934|9491174 9492083|9492083|9492083 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 2L - 9492036 9492096 stop_codon Gdi FlyBase G7224.1 CGAGGAGCAGTAAACGGGAATGAAGGCCTCATCTGGTTATGGTGCATTTGGACAGCTCAAC 9 9492054 0.974722863 5 8 51 1 1.204119983 0.3125 0.555555556 0.75 9 0 0 16 2L:9492036-9492096 6 17.5 775 FBgn0004868 1474.943333 78.36666667 119.7266667 0.011864863 0.22330923 0.146166268 -8 -3 -5.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 2L 9519762 9519768 + 2L_9519762_9519768_+ 0.823244724 0.823324393 0.823284558 5.64E-05 CG33298 FBtr0089854|FBtr0301065|FBtr0301064 9519753|9519753|9519753 9520696|9520696|9520696 2L + 9519743 9519815 stop_codon CG33298 FlyBase G3404.1 ATCAGATTATAACAACGATTACCTGATTAAGCGCCAAAATGCAATTCTTCGGCTATCTCAGCGGCAACTAAAA 59 9519769 0.653021631 10 56 306 0.957746479 1.531478917 0.112676056 0.152542373 0.295774648 59 2 1 68 2L:9519743-9519815 7 CG33298 FBtr0301064|FBtr0301065|FBtr0089854 9519753|9519753|9519753 9520696|9520696|9520696 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2L + 9519726 9519808 stop_codon CG33298 FlyBase G2690.1 CGATTATGGGTCTAAGAATCAGATTATAACAACGATTACCTGATTAAGCGCCAAAATGCAATTCTTCGGCTATCTCAGCGGCA 35 9519769 0.967301194 6 32 174 0.903846154 1.672097858 0.134615385 0.4 0.596153846 35 5 0 47 2L:9519726-9519808 7 39.5 776 FBgn0032120 1173.196667 22.66 34.66333333 0.033668694 1.743159753 1.139532647 -7 -7 -7 0.15 dme-miR-184-5p 6mer3-8 TGATAA 2L 9519895 9519900 + 2L_9519895_9519900_+ 0.998561205 0.855910435 0.92723582 0.100869348 CG33298 FBtr0089854|FBtr0301065|FBtr0089853|FBtr0301064 9519753|9519753|9519767|9519753 9520696|9520696|9520696|9520696 2L + 9519829 9519904 3'utr CG33298 FlyBase G3405.1 TAGCAACCCCCAAAACTTGTACACATGTGCTTTCGCTCTTAATATGTGGCCTTCGACACCGATTATTGATAATATT 20 9519891 0.983592534 8 19 151 1 1.431363764 0.111111111 0.25 0.444444444 20 0 0 27 2L:9519829-9519904 6 CG33298 FBtr0301064|FBtr0089853|FBtr0301065|FBtr0089854 9519753|9519767|9519753|9519753 9520696|9520696|9520696|9520696 TGATAA 6mer3-8 dme-miR-184-5p 2L + 9519842 9519903 3'utr CG33298 FlyBase G2691.1 AACTTGTACACATGTGCTTTCGCTCTTAATATGTGGCCTTCGACACCGATTATTGATAATAT 23 9519881 0.72833523 12 23 169 1 1.568201724 0 0.434782609 0.648648649 23 0 0 37 2L:9519842-9519903 6 8 777 FBgn0032120 1173.196667 22.66 34.66333333 0.006818976 0.353045013 0.230791422 4 14 9 0.15 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 9520288 9520294 + 2L_9520288_9520294_+ 0.724833966 0.712859774 0.71884687 0.008467038 CG33298 FBtr0089854|FBtr0301065|FBtr0089853|FBtr0301064 9519753|9519753|9519767|9519753 9520696|9520696|9520696|9520696 2L + 9520103 9520333 3'utr CG33298 FlyBase G3407.2 ACTAGGGAGCCAGAAGTGCTCGAGAATTGAACCCAACCTAACCGACTATTGTTAAATAGAAGCGAAAATGCAATGCTTATTTATGTGTACGATTATTTAAACTAGCGACTAATAGATGTATCACCCTAACAGAAATACTTGACAATTCAAACACAACAGAACTCCATTGCGAGTTCGATGATAAGGCTGTGATTCTACACTCATGAAGGATATACCTAAGCATATGATATA 667 9520284 0.872483124 32 627 5108 0.941634241 2.161966616 0.029831388 0.142428786 0.258106355 667 41 4 726 2L:9520103-9520333 7 CG33298 FBtr0301064|FBtr0089853|FBtr0301065|FBtr0089854 9519753|9519767|9519753|9519753 9520696|9520696|9520696|9520696 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L + 9520200 9520334 3'utr CG33298 FlyBase G2694.1 TAAACTAGCGACTAATAGATGTATCACCCTAACAGAAATACTTGACAATTCAAACACAACAGAACTCCATTGCGAGTTCGATGATAAGGCTGTGATTCTACACTCATGAAGGATATACCTAAGCATATGATATAT 441 9520283 0.813376428 19 414 3437 0.939882698 2.329736775 0.021994135 0.392290249 0.607038123 441 39 2 641 2L:9520200-9520334 7 510.5 778 FBgn0032120 1173.196667 22.66 34.66333333 0.435135911 22.52868491 14.72737763 4 5 4.5 0.15 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 9539238 9539244 + 2L_9539238_9539244_+ 0.812437553 0.812360401 0.812398977 5.46E-05 Oatp30B FBtr0079825|FBtr0079826|FBtr0079828|FBtr0079827 9538653|9538653|9538653|9538653 9540060|9540060|9540060|9540045 2L + 9539212 9539257 3'utr Oatp30B FlyBase G3412.1 ATTTAACCATTGTCAATGGAAATTGTGCTGTGAAACAATTTGTGAG 201 9539235 0.727564593 5 195 1097 0.977011494 1.62838893 0.011494253 0.23880597 0.413793103 201 1 5 255 2L:9539212-9539257 7 Oatp30B FBtr0079827|FBtr0079828|FBtr0079826|FBtr0079825 9538653|9538653|9538653|9538653 9540045|9540060|9540060|9540060 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L + 9539213 9539260 3'utr Oatp30B FlyBase G2697.1 TTTAACCATTGTCAATGGAAATTGTGCTGTGAAACAATTTGTGAGTAT 155 9539235 0.719439841 5 154 833 0.995594714 2.354108439 0 0.35483871 0.559471366 155 1 0 226 2L:9539213-9539260 7 177.5 779 FBgn0032123 86 1.96 2.986666667 2.063953488 90.56122449 59.43080357 3 3 3 0.15 dme-miR-1008-3p 6mer2-7 GCTGTG 2L 9549156 9549161 - 2L_9549156_9549161_- 0.857295805 0.843863098 0.850579452 0.009498353 jp FBtr0079861|FBtr0113030|FBtr0304057|FBtr0304056|FBtr0079860 9548256|9548256|9548256|9549012|9547718 9549578|9549578|9549578|9549578|9549578 2L - 9549147 9549183 3'utr jp FlyBase G9323.1 AAATACATACTTAAATCGCGTGGCTGTGCAGCCAATC 25 9549163 0.829425424 2 23 116 0.939393939 1.491361694 0 0.2 0.393939394 25 2 0 31 2L:9549147-9549183 6 jp FBtr0304057|FBtr0304056|FBtr0079861|FBtr0113030|FBtr0079860 9548256|9549012|9548256|9548256|9547718 9549578|9549578|9549578|9549578|9549578 GCTGTG 6mer2-7 dme-miR-1008-3p 2L - 9549148 9549176 3'utr jp FlyBase G7235.1 TACTTAAATCGCGTGGCTGTGCAGCCAAT 12 9549163 0.811238097 2 12 52 1 1.278753601 0 0.5 0.684210526 12 0 0 19 2L:9549148-9549176 6 18.5 780 FBgn0032129 7.333333333 0.28 0.416666667 2.522727273 66.07142857 44.4 2 2 2 0.15 dme-miR-2a-2-5p 7mer-m8 TGATGAG 2L 9549370 9549376 - 2L_9549370_9549376_- 0.656765761 0.348489203 0.502627482 0.217984474 jp FBtr0079861|FBtr0113030|FBtr0304057|FBtr0304056|FBtr0079860 9548256|9548256|9548256|9549012|9547718 9549578|9549578|9549578|9549578|9549578 2L - 9549358 9549395 3'utr jp FlyBase G9324.1 AAGTTTTTAGCATTTGCAGTGATGAGTTGATATAAAGC 6 9549382 0.629858196 4 6 52 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 2L:9549358-9549395 7 jp FBtr0304057|FBtr0304056|FBtr0079861|FBtr0113030|FBtr0079860 9548256|9549012|9548256|9548256|9547718 9549578|9549578|9549578|9549578|9549578 TGATGAG 7mer-m8 dme-miR-2a-2-5p 2L - 9549346 9549395 3'utr jp FlyBase G7237.1 AAGTTTTTAGCATTTGCAGTGATGAGTTGATATAAAGCAGAACTTATATA 8 9549382 0.979965384 7 8 60 1 1.204119983 0.0625 0.375 0.6875 8 0 0 16 2L:9549346-9549395 7 6.5 781 FBgn0032129 7.333333333 0.28 0.416666667 0.886363636 23.21428571 15.6 6 6 6 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 2L 9573472 9573478 + 2L_9573472_9573478_+ 0.782718018 0.782859794 0.782788906 0.000100268 CG3838 FBtr0079835|FBtr0079834 9572964|9572964 9573572|9573572 2L + 9573414 9573485 3'utr CG3838 FlyBase G3419.1 TGTTAGTTTAAGGACACTGTATATACGCTGCTATTGAAACCTAAACTATAGAATCTGTGTACAAATGAATTT 21 9573447 0.976981402 6 20 138 0.962962963 1.414973348 0 0.238095238 0.407407407 21 1 0 26 2L:9573414-9573485 7 CG3838 FBtr0079835|FBtr0079834 9572964|9572964 9573572|9573572 GTACAAA 7mer-A1 dme-miR-305-5p 2L + 9573424 9573484 3'utr CG3838 FlyBase G2703.1 AGGACACTGTATATACGCTGCTATTGAAACCTAAACTATAGAATCTGTGTACAAATGAATT 10 9573468 0.981415008 7 9 59 0.875 0.669006781 0.0625 0.3 0.5625 10 0 2 14 2L:9573424-9573484 7 7 782 FBgn0032130 513.3333333 25.81 39.59333333 0.013636364 0.271212708 0.176797441 25 4 14.5 0.15 dme-miR-1008-3p 6mer2-7 GCTGTG 2L 9573534 9573539 + 2L_9573534_9573539_+ 1 1 1 0 CG3838 FBtr0079835|FBtr0079834 9572964|9572964 9573572|9573572 2L + 9573509 9573552 3'utr CG3838 FlyBase G3420.1 TAAAGAGATAGATCGATATCAAACTGCTGTGTGTAATAATAAAC 17 9573540 0.967257934 5 16 120 0.954545455 1.322219295 0.045454545 0.235294118 0.409090909 17 1 0 21 2L:9573509-9573552 6 CG3838 FBtr0079835|FBtr0079834 9572964|9572964 9573572|9573572 GCTGTG 6mer2-7 dme-miR-1008-3p 2L + 9573517 9573553 3'utr CG3838 FlyBase G2704.1 TAGATCGATATCAAACTGCTGTGTGTAATAATAAACA 8 9573540 0.672032578 3 7 58 0.9 0.954242509 0 0.25 0.4 8 1 0 9 2L:9573517-9573553 6 12.5 783 FBgn0032130 513.3333333 25.81 39.59333333 0.024350649 0.484308408 0.315709715 -6 -6 -6 0.15 dme-miR-184-3p 6mer2-7 CCGTCC 2L 9615705 9615710 + 2L_9615705_9615710_+ 0.999622078 0.999942731 0.999782404 0.000226698 Trx-2 FBtr0079839|FBtr0079840 9615680|9615680 9616404|9616047 2L + 9615577 9615781 stop_codon Trx-2 FlyBase G3425.1 TCCAGCATGCCCACCTTCGTGTTCCTCAAGAACGGCGTCAAGGTCGAAGAGTTCGCCGGAGCCAACGCCAAGCGTCTGGAGGATGTCATCAAGGCCAATATCTAAGTGGGCAGCGCATAGACGTCTGGCCGTCCCCCTGATCCACCTATGAGTTTTCTTCATAACATTTAGTTAATTAATTAATTCCATAAGTGCAGGGTTTTGC 90 9615702 0.980793021 26 83 594 0.923076923 1.380211242 0.230769231 0.155555556 0.269230769 90 5 3 96 2L:9615577-9615781 6 Trx-2 FBtr0079840|FBtr0079839 9615680|9615680 9616047|9616404 CCGTCC 6mer2-7 dme-miR-184-3p 2L + 9615616 9615741 stop_codon Trx-2 FlyBase G2707.1 AAGGTCGAAGAGTTCGCCGGAGCCAACGCCAAGCGTCTGGAGGATGTCATCAAGGCCAATATCTAAGTGGGCAGCGCATAGACGTCTGGCCGTCCCCCTGATCCACCTATGAGTTTTCTTCATAAC 47 9615702 0.885607615 16 42 263 0.944444444 1.531478917 0.166666667 0.361702128 0.583333333 47 3 1 68 2L:9615616-9615741 6 32 784 FBgn0040070 814.6666667 126.4433333 193.1533333 0.039279869 0.253077795 0.165671487 3 3 3 0.15 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 2L 9622451 9622456 + 2L_9622451_9622456_+ 0.700443955 0.933767373 0.817105664 0.164984558 GlcAT-S FBtr0079842|FBtr0079842|FBtr0079841|FBtr0079841 9622426|9622426|9622426|9622426 9623109|9623109|9623109|9623109 2L + 9622419 9622483 stop_codon GlcAT-S FlyBase G3431.1 CTTAGCTGAGTCCTATGGTCCAACCCGAATAATACTTATAGACTTTTAGAGCTAAATGTATAGTT 74 9622464 0.98430108 7 73 587 0.988235294 1.924279286 0.164705882 0.148648649 0.258823529 74 1 0 84 2L:9622419-9622483 6 GlcAT-S FBtr0079842|FBtr0079842|FBtr0302199|FBtr0302199|FBtr0079841|FBtr0079841 9622426|9622426|9622426|9622426|9622426|9622426 9623109|9623109|9622588|9622588|9623109|9623109 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 2L + 9622443 9622504 3'utr GlcAT-S FlyBase G2713.1 CCGAATAATACTTATAGACTTTTAGAGCTAAATGTATAGTTATTCTAAAACAAATCTCGAAT 42 9622464 0.982664584 7 41 314 1 1.785329835 0.245901639 0.404761905 0.590163934 42 0 0 61 2L:9622443-9622504 6 55 785 FBgn0032135 82.33333333 4.263333333 6.536666667 0.668016194 12.90070367 8.414074452 -13 -13 -13 0.15 dme-miR-1002-5p 6mer3-8 CTACTT 2L 9682843 9682848 - 2L_9682843_9682848_- 0.574308267 0.684058604 0.629183435 0.077605181 Pka-C1 FBtr0079851|FBtr0079852 9682313|9682313 9696504|9696504 2L - 9682827 9682871 3'utr Pka-C1 FlyBase G9342.1 GATACATTATGCACTAATTTGTACTACTTTTATCGTCTATCTATT 16 9682852 0.80132787 2 16 205 1 1.230448921 0.117647059 0.0625 0.117647059 16 0 0 17 2L:9682827-9682871 6 Pka-C1 FBtr0079852|FBtr0079851 9682313|9682313 9696504|9696504 CTACTT 6mer3-8 dme-miR-1002-5p 2L - 9682831 9682864 3'utr Pka-C1 FlyBase G7262.1 TATGCACTAATTTGTACTACTTTTATCGTCTATC 13 9682852 0.693629994 2 12 137 0.894736842 1.230448921 0 0.461538462 0.631578947 13 2 0 17 2L:9682831-9682864 6 14.5 786 FBgn0000273 1905.386667 46.66 72.09 0.007610004 0.31075868 0.201137467 4 4 4 0.15 dme-miR-79-3p 7mer-A1 AGCTTTA 2L 9682919 9682925 - 2L_9682919_9682925_- 0.392217575 0.399095399 0.395656487 0.004863339 Pka-C1 FBtr0079851|FBtr0079852 9682313|9682313 9696504|9696504 2L - 9682875 9682947 3'utr Pka-C1 FlyBase G9343.1 AATATCTGAGGAGCCCAACCTGAGCTTTACTATCTGACTAACGATTTGAATGCATGCTTTACGTTATTGTATT 61 9682927 0.983869295 6 60 378 0.985074627 1.819543936 0.23880597 0.049180328 0.134328358 61 1 0 66 2L:9682875-9682947 7 Pka-C1 FBtr0079852|FBtr0079851 9682313|9682313 9696504|9696504 AGCTTTA 7mer-A1 dme-miR-79-3p 2L - 9682883 9682946 3'utr Pka-C1 FlyBase G7263.1 ATATCTGAGGAGCCCAACCTGAGCTTTACTATCTGACTAACGATTTGAATGCATGCTTTACGTT 43 9682927 0.98910942 3 43 283 1 1.755874856 0.315789474 0.302325581 0.473684211 43 0 0 57 2L:9682883-9682946 7 49.5 787 FBgn0000273 1905.386667 46.66 72.09 0.025978979 1.060865838 0.686641698 2 2 2 0.15 dme-miR-14-3p 6mer3-8 AAGACT 2L 9683573 9683578 - 2L_9683573_9683578_- 0.827399103 0.912076492 0.869737797 0.059875964 Pka-C1 FBtr0079851|FBtr0335495|FBtr0079852 9682313|9683360|9682313 9696504|9696504|9696504 2L - 9683513 9683603 3'utr Pka-C1 FlyBase G9347.1 CTGTTATTATTTATTTCTAAAAGTGAAGACTTTTAAATTATGTTGTTGTGAGATGAGAGAAGAGATATAAAGAGCGAGAGCAACTCGGGAT 66 9683571 0.986744313 6 65 478 0.976190476 1.913813852 0.05952381 0.196969697 0.369047619 66 2 0 82 2L:9683513-9683603 6 Pka-C1 FBtr0335495|FBtr0079852|FBtr0079851 9683360|9682313|9682313 9696504|9696504|9696504 AAGACT 6mer3-8 dme-miR-14-3p 2L - 9683480 9683597 3'utr Pka-C1 FlyBase G7266.1 TTATTTATTTCTAAAAGTGAAGACTTTTAAATTATGTTGTTGTGAGATGAGAGAAGAGATATAAAGAGCGAGAGCAACTCGGGATCGTAACAAATAACAAATAAATTTAATTTATAGA 49 9683571 0.98632084 10 46 388 0.913043478 1.799340549 0.028985507 0.265306122 0.47826087 49 6 0 63 2L:9683480-9683597 6 49.5 788 FBgn0000273 1905.386667 46.66 72.09 0.025978979 1.060865838 0.686641698 -7 -7 -7 0.15 dme-miR-283-5p 7mer-m1 GATATTT 2L 9684995 9685001 - 2L_9684995_9685001_- 0.758494612 0.747573132 0.753033872 0.007722667 Pka-C1 FBtr0079851|FBtr0335495|FBtr0079852 9682313|9683360|9682313 9696504|9696504|9696504 2L - 9684964 9685020 3'utr Pka-C1 FlyBase G9351.1 ATTTAACCACGAGACTACAGATATTTAGTTGTAAACGTAGCTTAGTCTTAACTAAAG 9 9684993 0.863093103 6 8 73 0.9 0.954242509 0 0.111111111 0.2 9 1 0 9 2L:9684964-9685020 7 Pka-C1 FBtr0335495|FBtr0079852|FBtr0079851 9683360|9682313|9682313 9696504|9696504|9696504 GATATTT 7mer-m1 dme-miR-283-5p 2L - 9684964 9685018 3'utr Pka-C1 FlyBase G7267.1 TTAACCACGAGACTACAGATATTTAGTTGTAAACGTAGCTTAGTCTTAACTAAAG 6 9684996 0.982125427 4 6 50 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 2L:9684964-9685018 7 7 789 FBgn0000273 1905.386667 46.66 72.09 0.003673795 0.150021432 0.097100846 -8 -5 -6.5 0.15 dme-miR-277-3p 6mer2-7 GCATTT 2L 9708303 9708308 + 2L_9708303_9708308_+ 0.990435049 0.81338858 0.901911814 0.12519071 pelo FBtr0079847 9708268 9708883 2L + 9708265 9708345 stop_codon pelo FlyBase G3490.1 ACTAGGATCATAAATAGGAATAGCTTCATGGAATCTTGGCATTTGATAACGGAAAATTTTGACTTAGGAACTTAACTAGCG 40 9708293 0.974859371 8 39 281 0.980392157 1.397940009 0.215686275 0.225 0.392156863 40 0 1 50 2L:9708265-9708345 6 pelo FBtr0079847 9708268 9708883 GCATTT 6mer2-7 dme-miR-277-3p 2L + 9708254 9708346 stop_codon pelo FlyBase G2746.1 TAGCGATAGCGACTAGGATCATAAATAGGAATAGCTTCATGGAATCTTGGCATTTGATAACGGAAAATTTTGACTTAGGAACTTAACTAGCGA 27 9708323 0.98099544 8 24 170 0.923076923 1.255272505 0.025641026 0.296296296 0.512820513 27 2 1 36 2L:9708254-9708346 6 21 790 FBgn0011207 455.0266667 27.06 41.48666667 0.046151141 0.776053215 0.506186727 10 -20 -5 0.15 dme-miR-92b-3p 7mer-A1 TGCAATA 2L 9737297 9737303 + 2L_9737297_9737303_+ 0.368287048 0.53440827 0.451347659 0.117465498 CG13117 FBtr0079864|FBtr0335503 9737041|9737041 9737329|9737949 2L + 9737165 9737317 3'utr CG13117 FlyBase G3500.1 TTCATGCCCCAAAATTGCTTACCGGATTCGGGAGTCGGAATGGGAGGATAGAAATGGCTGCCCAGGGCTAAACCAACTATGTATATAAGCATCCCATGAATATTTATGTGCCACCCTCCTGTACCCTGATAATGCAATAAAAGTATTATTTGA 124 9737284 0.975840058 16 120 756 0.966666667 2.161368002 0.1 0.169354839 0.313333333 124 5 0 145 2L:9737165-9737317 7 CG13117 FBtr0335503|FBtr0079864 9737041|9737041 9737949|9737329 TGCAATA 7mer-A1 dme-miR-92b-3p 2L + 9737251 9737320 3'utr CG13117 FlyBase G2751.1 AAGCATCCCATGAATATTTATGTGCCACCCTCCTGTACCCTGATAATGCAATAAAAGTATTATTTGATAG 90 9737284 0.719749638 9 85 544 0.965753425 2.149219113 0.116438356 0.388888889 0.623287671 90 5 0 141 2L:9737251-9737320 7 51.5 791 FBgn0032140 1013.62 184.7266667 282.6533333 0.050807995 0.278790285 0.182201991 13 13 13 0.15 dme-miR-305-5p 6mer2-7 GTACAA 2L 9762211 9762216 + 2L_9762211_9762216_+ 0.997965195 0.966791558 0.982378376 0.022043064 zf30C FBtr0079865 9762140 9762375 2L + 9762187 9762223 3'utr zf30C FlyBase G3517.1 TTGTAAACGGATGCGTATTCTACTGTACAACAAATGG 10 9762209 0.740033823 4 10 68 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 2L:9762187-9762223 6 zf30C FBtr0079865 9762140 9762375 GTACAA 6mer2-7 dme-miR-305-5p 2L + 9762185 9762226 3'utr zf30C FlyBase G2769.1 TTTTGTAAACGGATGCGTATTCTACTGTACAACAAATGGGAT 6 9762210 0.989693604 2 5 54 0.9 0.954242509 0.3 0.333333333 0.6 6 1 0 9 2L:9762185-9762226 6 7.5 792 FBgn0022720 989.03 40.54 62.34666667 0.007583188 0.185002467 0.120295124 2 1 1.5 0.15 dme-miR-968-5p 7mer-A1 CTACTTA 2L 9762246 9762252 + 2L_9762246_9762252_+ 0.612891346 0.642900356 0.627895851 0.021219638 zf30C FBtr0079865 9762140 9762375 2L + 9762236 9762274 3'utr zf30C FlyBase G3518.1 ATAATAATATCTACTTAATGACTGGATTAATTAAATAAC 11 9762252 0.632889169 6 10 86 0.933333333 0.84509804 0.066666667 0.272727273 0.466666667 11 0 1 14 2L:9762236-9762274 7 zf30C FBtr0079865 9762140 9762375 CTACTTA 7mer-A1 dme-miR-968-5p 2L + 9762236 9762273 3'utr zf30C FlyBase G2770.1 ATAATAATATCTACTTAATGACTGGATTAATTAAATAA 10 9762250 0.728046111 8 10 76 1 1.255272505 0 0.6 0.777777778 10 0 0 18 2L:9762236-9762273 7 10 793 FBgn0022720 989.03 40.54 62.34666667 0.010110917 0.246669956 0.160393499 -6 -4 -5 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC 2L 9935126 9935132 - 2L_9935126_9935132_- 0.658958539 0.661532927 0.660245733 0.001820376 CG31712 FBtr0079896|FBtr0331636 9934765|9934765 9935255|9937003 2L - 9935089 9935143 3'utr CG31712 FlyBase G9443.1 ATTGTTGTAATTGTGTTCTATATTATTTTTATTATTTTAAGGACGAGCTGTGGTG 13 9935133 0.992917741 3 13 159 1 1.176091259 0.333333333 0.153846154 0.266666667 13 0 0 15 2L:9935089-9935143 7 CG31712 FBtr0331636|FBtr0079896 9934765|9934765 9937003|9935255 TGTGTTC 7mer-m8 dme-miR-317-3p 2L - 9935107 9935147 3'utr CG31712 FlyBase G7341.1 TTTCATTGTTGTAATTGTGTTCTATATTATTTTTATTATTT 14 9935133 0.771693206 3 12 182 0.888888889 1.380211242 0.481481481 0.428571429 0.703703704 14 3 0 24 2L:9935107-9935147 7 12.5 794 FBgn0051712 467.1633333 25.39666667 38.91333333 0.026757237 0.492190576 0.321226658 1 1 1 0.15 dme-miR-14-3p 6mer2-7 AGACTG 2L 9959387 9959392 - 2L_9959387_9959392_- 0.896898439 0.929705866 0.913302152 0.023198406 CG5850 FBtr0309209 9959246 9961354 2L - 9959362 9959407 3'utr CG5850 FlyBase G9457.1 TGTTTTTAACAGCTTAGACTGGAGATAATGCCGTTTATAACGATAT 10 9959394 0.975115098 3 10 66 1 1.079181246 0.25 0.1 0.25 10 0 0 12 2L:9959362-9959407 6 CG5850 FBtr0309209 9959246 9961354 AGACTG 6mer2-7 dme-miR-14-3p 2L - 9959374 9959402 3'utr CG5850 FlyBase G7348.1 TTAACAGCTTAGACTGGAGATAATGCCGT 6 9959394 0.74304757 2 6 25 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2L:9959374-9959402 6 8 795 FBgn0032172 968.71 41.72666667 64.24 0.008258406 0.191723918 0.124533001 2 2 2 0.15 dme-miR-33-5p 6mer2-7 AATGCA 2L 9959450 9959455 - 2L_9959450_9959455_- 0.922487642 0.999887227 0.961187434 0.054729782 CG5850 FBtr0309209 9959246 9961354 2L - 9959448 9959515 3'utr CG5850 FlyBase G9458.1 CGTGTAGTTCTTGTTGTTGGTTGACTGTTGTTGGGTATGGAGAATCGTAGACTTAGTTTAAATGCATC 14 9959468 0.782351108 7 12 116 0.9375 0.875061263 0.125 0.142857143 0.25 14 0 1 15 2L:9959448-9959515 6 CG5850 FBtr0309209 9959246 9961354 AATGCA 6mer2-7 dme-miR-33-5p 2L - 9959450 9959489 3'utr CG5850 FlyBase G7349.1 GTTGTTGGGTATGGAGAATCGTAGACTTAGTTTAAATGCA 5 9959459 0.826700212 2 4 36 1 0.84509804 0.571428571 0.4 0.571428571 5 0 0 7 2L:9959450-9959489 5 1.5 796 FBgn0032172 968.71 41.72666667 64.24 0.001548451 0.035948235 0.023349938 13 4 8.5 0.15 dme-miR-1006-3p 6mer2-7 GAATTT 2L 9959858 9959863 + 2L_9959858_9959863_+ 0.671002734 0.721347811 0.696175273 0.035599362 CG4658 FBtr0343738|FBtr0079887|FBtr0079885|FBtr0079886 9959719|9959719|9959719|9959719 9960168|9960168|9960168|9960168 2L + 9959806 9959928 3'utr CG4658 FlyBase G3608.1 CTGGGATTTGCTATAGTTATGCACTCGCAGCACGAGAAGTAATCACTGGACTGAATTTGTTTTTAATTGATGTTGATTGATATTCGGTTTACTTGTTTTTCTTTCTATTATCAGTGTTTAGTA 168 9959852 0.979499304 20 163 1170 0.974489796 1.803912113 0.163265306 0.130952381 0.255102041 168 3 2 191 2L:9959806-9959928 6 CG4658 FBtr0079885|FBtr0079886|FBtr0343738|FBtr0079887 9959719|9959719|9959719|9959719 9960168|9960168|9960168|9960168 GAATTT 6mer2-7 dme-miR-1006-3p 2L + 9959781 9959901 3'utr CG4658 FlyBase G2845.1 GAGGGGCATGCCACATTGAAATTTACTGGGATTTGCTATAGTTATGCACTCGCAGCACGAGAAGTAATCACTGGACTGAATTTGTTTTTAATTGATGTTGATTGATATTCGGTTTACTTGT 151 9959852 0.97960447 14 145 1010 0.955752212 2.334453751 0.159292035 0.377483444 0.584070796 151 10 0 216 2L:9959781-9959901 6 144.5 797 FBgn0032170 375.85 20.51333333 31.41333333 0.384461886 7.044198895 4.599957555 6 6 6 0.15 dme-miR-1006-3p 6mer2-7 GAATTT 2L 9960548 9960553 - 2L_9960548_9960553_- 0.999671815 0.990490927 0.995081371 0.006491877 CG5850 FBtr0309209|FBtr0309210|FBtr0309211|FBtr0329986|FBtr0079890|FBtr0303901 9959246|9960448|9960448|9960448|9960448|9960448 9961354|9961354|9961354|9961003|9961354|9961354 2L - 9960458 9960620 3'utr CG5850 FlyBase G9459.1 ATGTAGGTCTCCAACTTTTTGTGTGGCGAAGTAGTTAATTAAAAAAAAACATGCCTGAACCGATTGTGAATTTTGTGACTGCCGCCGGTCAGAAAAGGGCGTGACTTGTATTTAAATAGAAATTCTTATTGTAAAACTAATATACACATCAATAATATAATAT 107 9960556 0.983290046 19 102 789 0.955555556 1.809559715 0.162962963 0.224299065 0.385185185 107 5 1 129 2L:9960458-9960620 6 CG5850 FBtr0079890|FBtr0303901|FBtr0309211|FBtr0329986|FBtr0309209|FBtr0309210 9960448|9960448|9960448|9960448|9959246|9960448 9961354|9961354|9961354|9961003|9961354|9961354 GAATTT 6mer2-7 dme-miR-1006-3p 2L - 9960460 9960579 3'utr CG5850 FlyBase G7350.1 AAAAAAAACATGCCTGAACCGATTGTGAATTTTGTGACTGCCGCCGGTCAGAAAAGGGCGTGACTTGTATTTAAATAGAAATTCTTATTGTAAAACTAATATACACATCAATAATATAAT 87 9960549 0.983647737 15 84 639 0.965517241 2.049218023 0.181034483 0.287356322 0.465517241 87 4 0 112 2L:9960460-9960579 6 80.5 798 FBgn0032172 968.71 41.72666667 64.24 0.083100205 1.92922192 1.253113325 3 -4 -0.5 0.15 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2L 9964338 9964343 - 2L_9964338_9964343_- 0.93965574 0.944868283 0.942262011 0.003685865 Dref FBtr0310483|FBtr0079889 9964278|9964145 9964544|9964544 2L - 9964319 9964402 3'utr Dref FlyBase G9472.1 AGCCTTGGGACGTACACGGAACATCTTAAGTTATCGACGTATAAATGTTAAGGGAACATTTTGACATCATATATTCAAATCAAA 12 9964342 0.974404867 5 12 70 1 1.204119983 0.3125 0.333333333 0.5 12 0 0 16 2L:9964319-9964402 6 Dref FBtr0310483|FBtr0079889 9964278|9964145 9964544|9964544 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2L - 9964330 9964353 3'utr Dref FlyBase G7360.1 AAGGGAACATTTTGACATCATATA 7 9964342 0.638058883 2 6 38 1 1.079181246 0.166666667 0.428571429 0.666666667 7 0 0 12 2L:9964330-9964353 6 7.5 799 FBgn0015664 973.63 41.70666667 63.79666667 0.007703132 0.179827366 0.117561001 -1 -1 -1 0.15 dme-miR-33-5p 7mer-A1 AATGCAA 2L 9964511 9964517 - 2L_9964511_9964517_- 0.728666692 0.766312029 0.747489361 0.026619247 Dref FBtr0310483|FBtr0079889 9964278|9964145 9964544|9964544 2L - 9964498 9964557 stop_codon Dref FlyBase G9473.2 TCACAACAATTAGTCTGCACTGGCGACTACTGTTTCTTATAATGCAAATACTTTTTAATT 29 9964519 0.792664869 9 25 265 0.894736842 1.531478917 0.157894737 0.206896552 0.394736842 29 4 0 34 2L:9964498-9964557 7 Dref FBtr0310483|FBtr0079889 9964278|9964145 9964544|9964544 AATGCAA 7mer-A1 dme-miR-33-5p 2L - 9964442 9964546 stop_codon Dref FlyBase G7361.1 AGTCTGCACTGGCGACTACTGTTTCTTATAATGCAAATACTTTTTAATTACTTTTAACGTAATCCGATCTTGTGTATATGAAAATGACTACCAGGGGCGAGGCAA 17 9964518 0.991908626 11 14 142 0.793103448 1.361727836 0.24137931 0.529411765 0.724137931 17 6 0 23 2L:9964442-9964546 7 14.5 800 FBgn0015664 973.63 41.70666667 63.79666667 0.014892721 0.34766624 0.227284602 2 1 1.5 0.15 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 9994974 9994981 + 2L_9994974_9994981_+ 0.625356155 0.625310721 0.625333438 3.22E-05 bib FBtr0329984|FBtr0079929 9994780|9994657 9995538|9995538 2L + 9994964 9994991 3'utr bib FlyBase G3617.1 AAAGATCATGTACGCTTAAGGAACTAAT 12 9994973 0.71476225 3 11 55 0.9375 1.176091259 0.125 0.333333333 0.5 12 1 0 15 2L:9994964-9994991 8 bib FBtr0329984|FBtr0079929 9994780|9994657 9995538|9995538 TACGCTTA 8mer-A1 dme-miR-965-3p 2L + 9994959 9994990 3'utr bib FlyBase G2856.1 CTAGCAAAGATCATGTACGCTTAAGGAACTAA 8 9994972 0.793843936 3 7 37 0.818181818 0.954242509 0.363636364 0.375 0.545454545 8 2 0 9 2L:9994959-9994990 8 10 801 FBgn0000180 1.333333333 0.05 0.08 7.5 200 125 1 2 1.5 0.15 dme-miR-14-3p 7mer-A1 AGACTGA 2L 9995043 9995049 + 2L_9995043_9995049_+ 0.818268229 0.816182387 0.817225308 0.001474883 bib FBtr0329984|FBtr0079929 9994780|9994657 9995538|9995538 2L + 9995002 9995066 3'utr bib FlyBase G3618.1 ATTCACCGAAGGCTAGACTAAACGAGTGATCTAGATGATCTAGACTGAAAGACAGGTGCATTTAA 15 9995040 0.952063857 5 15 65 1 1.278753601 0.157894737 0.266666667 0.421052632 15 0 0 19 2L:9995002-9995066 7 bib FBtr0329984|FBtr0079929 9994780|9994657 9995538|9995538 AGACTGA 7mer-A1 dme-miR-14-3p 2L + 9995001 9995065 3'utr bib FlyBase G2857.1 CATTCACCGAAGGCTAGACTAAACGAGTGATCTAGATGATCTAGACTGAAAGACAGGTGCATTTA 21 9995041 0.953744492 8 19 86 0.966666667 1.161368002 0.1 0.333333333 0.533333333 21 0 1 29 2L:9995001-9995065 7 15.5 802 FBgn0000180 1.333333333 0.05 0.08 11.625 310 193.75 3 2 2.5 0.15 dme-miR-14-3p 7mer-A1 AGACTGA 2L 9995216 9995222 + 2L_9995216_9995222_+ 0.823188932 0.823282235 0.823235584 6.60E-05 bib FBtr0329984|FBtr0079929 9994780|9994657 9995538|9995538 2L + 9995193 9995242 3'utr bib FlyBase G3619.1 ATGTTTCTTGTAAATGCAAAACTAGACTGAACTTACCTAAAGCATTTTGT 18 9995215 0.916712645 6 17 102 0.95 0.977723605 0.15 0.111111111 0.2 18 0 1 19 2L:9995193-9995242 7 bib FBtr0329984|FBtr0079929 9994780|9994657 9995538|9995538 AGACTGA 7mer-A1 dme-miR-14-3p 2L + 9995200 9995230 3'utr bib FlyBase G2858.1 TTGTAAATGCAAAACTAGACTGAACTTACCT 9 9995215 0.869672552 3 9 40 1 1.230448921 0 0.555555556 0.764705882 9 0 0 17 2L:9995200-9995230 7 13.5 803 FBgn0000180 1.333333333 0.05 0.08 10.125 270 168.75 1 1 1 0.15 dme-miR-980-5p 6mer3-8 GAAAAA 2R 10028711 10028716 - 2R_10028711_10028716_- 0.528732224 0.55507096 0.541901592 0.018624344 CG1407 FBtr0330325|FBtr0088435 10028441|10028441 10028876|10028918 2R - 10028702 10028761 3'utr CG1407 FlyBase G21601.1 GAGTCGATAGACAATTGTAATGTATATGTATGTAAGTGATAATGCGAAAAATGTTAGGAG 18 10028719 0.983105596 5 17 126 0.952380952 1 0.285714286 0.111111111 0.238095238 18 0 1 20 2R:10028702-10028761 6 CG1407 FBtr0088435|FBtr0330325 10028441|10028441 10028918|10028876 GAAAAA 6mer3-8 dme-miR-980-5p 2R - 10028700 10028761 3'utr CG1407 FlyBase G16398.1 GAGTCGATAGACAATTGTAATGTATATGTATGTAAGTGATAATGCGAAAAATGTTAGGAGAT 15 10028719 0.990835112 4 12 122 0.807692308 1.021189299 0.230769231 0.466666667 0.692307692 15 4 1 21 2R:10028700-10028761 6 7.5 804 FBgn0033474 835.29 47.03 72.28 0.008978918 0.159472677 0.103763143 3 3 3 0.15 dme-miR-14-3p 6mer3-8 AAGACT 2R 10029424 10029429 - 2R_10029424_10029429_- 0.993102476 0.999817852 0.996460164 0.004748505 CG1407 FBtr0339418|FBtr0088436|FBtr0339420|FBtr0339419 10029261|10029261|10029261|10029261 10029804|10029804|10029804|10029804 2R - 10029377 10029502 3'utr CG1407 FlyBase G21603.1 TATCCTCCGAAGATTTGTACCTTGCTAATGCATTCATGAAACCAACTATCCTTGTAGATATCGAAAGATCTTCAAGACTTAAACCTAATGATAAGCAATGAGATTTCAGTACACACTATTAACACA 36 10029432 0.931954344 13 31 253 0.880952381 1.091080469 0.071428571 0.111111111 0.238095238 36 3 2 37 2R:10029377-10029502 6 CG1407 FBtr0339419|FBtr0088436|FBtr0339420|FBtr0339418 10029261|10029261|10029261|10029261 10029804|10029804|10029804|10029804 AAGACT 6mer3-8 dme-miR-14-3p 2R - 10029406 10029500 3'utr CG1407 FlyBase G16401.1 TCCTCCGAAGATTTGTACCTTGCTAATGCATTCATGAAACCAACTATCCTTGTAGATATCGAAAGATCTTCAAGACTTAAACCTAATGATAAGCA 26 10029432 0.743163647 10 21 161 0.756756757 1.447158031 0.243243243 0.346153846 0.540540541 26 9 0 28 2R:10029406-10029500 6 16 805 FBgn0033474 835.29 47.03 72.28 0.019155024 0.340208378 0.221361372 3 3 3 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 2R 10029843 10029848 - 2R_10029843_10029848_- 0.998836527 0.980833647 0.989835087 0.012729973 CG1407 FBtr0300719 10029713 10031507 2R - 10029792 10029872 stop_codon CG1407 FlyBase G21606.1 ATCCGTTGACAAGCGCTGATCCTGCCAAAGGCTTCCCACGCCCGCCGAATGGCGATCTGCCAGTTTAAATAATAACGTAGA 14 10029853 0.953639791 7 13 61 1 1.176091259 0.2 0.071428571 0.133333333 14 0 0 15 2R:10029792-10029872 6 CG1407 FBtr0300719 10029713 10031507 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 10029826 10029872 3'utr CG1407 FlyBase G16404.1 ATCCGTTGACAAGCGCTGATCCTGCCAAAGGCTTCCCACGCCCGCCG 5 10029854 0.880776931 3 5 19 1 0.954242509 0.333333333 0.6 0.777777778 5 0 0 9 2R:10029826-10029872 6 8 806 FBgn0033474 835.29 47.03 72.28 0.009577512 0.170104189 0.110680686 5 6 5.5 0.15 dme-miR-276a-3p 6mer2-7 GTTCCT 2R 10031100 10031105 - 2R_10031100_10031105_- 0.998041695 0.936513283 0.967277489 0.043507149 CG1407 FBtr0300719 10029713 10031507 2R - 10031086 10031131 5'utr CG1407 FlyBase G21610.1 GTATTTGGTGACGACTGGCAATACTGGTTCCTGCCCGTGTTTTCGA 7 10031107 0.754959742 5 7 56 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 2R:10031086-10031131 6 CG1407 FBtr0300719 10029713 10031507 GTTCCT 6mer2-7 dme-miR-276a-3p 2R - 10031089 10031137 5'utr CG1407 FlyBase G16407.1 TGCGAAGTATTTGGTGACGACTGGCAATACTGGTTCCTGCCCGTGTTTT 6 10031107 0.971774704 3 6 38 1 0.84509804 0.428571429 0.166666667 0.285714286 6 0 0 7 2R:10031089-10031137 6 4.5 807 FBgn0033474 835.29 47.03 72.28 0.005387351 0.095683606 0.062257886 2 2 2 0.15 dme-miR-14-3p 7mer-A1 AGACTGA 2R 10036098 10036104 - 2R_10036098_10036104_- 0.823288516 0.823303243 0.82329588 1.04E-05 oys FBtr0345630|FBtr0088434|FBtr0339416|FBtr0345629 10034593|10035771|10035534|10035534 10036943|10036943|10036943|10036943 2R - 10036088 10036126 3'utr oys FlyBase G21617.1 AAGTCAACCAAATCCTAACTTTAGACTGAAGCTATTGAC 45 10036106 0.688415768 5 45 251 1 1.748188027 0 0.177777778 0.339285714 45 0 0 56 2R:10036088-10036126 7 oys FBtr0339416|FBtr0345629|FBtr0345630|FBtr0088434 10035534|10035534|10034593|10035771 10036943|10036943|10036943|10036943 AGACTGA 7mer-A1 dme-miR-14-3p 2R - 10036067 10036121 3'utr oys FlyBase G16412.1 AACCAAATCCTAACTTTAGACTGAAGCTATTGACATTTACTAAGCAAACAAAAAG 20 10036106 0.967176757 6 20 108 1 1.544068044 0 0.45 0.685714286 20 0 0 35 2R:10036067-10036121 7 32 808 FBgn0033476 2953.663333 97.33666667 148.7366667 0.010834004 0.328755865 0.215145335 2 2 2 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 10071028 10071034 - 2R_10071028_10071034_- 0.661456381 0.661474877 0.661465629 1.31E-05 CG1371 FBtr0088428 10070979 10071210 2R - 10070963 10071073 3'utr CG1371 FlyBase G21645.1 ATTTTTCACTTTCCATACATAGATTGAGGCAAGTTTATTTGTGTTCGTTATCCACTCTTATAGCTAAAATAAATAAATACAATTAAATAGATTAATTAGACAAGGCTGTTC 125 10071035 0.991200133 11 124 1316 0.993506494 2.184691431 0.181818182 0.16 0.318181818 125 1 0 153 2R:10070963-10071073 7 CG1371 FBtr0088428 10070979 10071210 TGTGTTC 7mer-m8 dme-miR-317-3p 2R - 10070995 10071064 3'utr CG1371 FlyBase G16436.1 TTTCCATACATAGATTGAGGCAAGTTTATTTGTGTTCGTTATCCACTCTTATAGCTAAAATAAATAAATA 71 10071035 0.851982903 7 70 724 0.99 1.995635195 0.18 0.323943662 0.52 71 1 0 99 2R:10070995-10071064 7 82 809 FBgn0033482 1240.746667 38.63666667 59.06666667 0.066089237 2.122336295 1.388261851 1 1 1 0.15 dme-miR-1003-3p 7mer-A1 TGTGAGA 2R 10071122 10071128 - 2R_10071122_10071128_- 0.586997816 0.594669481 0.590833649 0.005424711 CG1371 FBtr0088428 10070979 10071210 2R - 10071111 10071177 3'utr CG1371 FlyBase G21647.1 AGTCACATTTCGAGGTATTCGCGGTAGGTATTCATTTGGTTTTTGTTTCTGTGAGATTTTGTTTAAC 28 10071131 0.668112048 12 25 342 0.947368421 1.255272505 0.447368421 0.25 0.447368421 28 1 1 36 2R:10071111-10071177 7 CG1371 FBtr0088428 10070979 10071210 TGTGAGA 7mer-A1 dme-miR-1003-3p 2R - 10071110 10071251 stop_codon CG1371 FlyBase G16438.1 AGATAAATGCCATCAAGAAGAAAAAGACCAAGAAGATTTAGTTCCGACTGATAGTCGCATTAGTTGTTCAATTTAGTCACATTTCGAGGTATTCGCGGTAGGTATTCATTTGGTTTTTGTTTCTGTGAGATTTTGTTTAACC 32 10071132 0.991875272 16 29 315 0.962264151 1.707570176 0.113207547 0.46875 0.679245283 32 2 0 51 2R:10071110-10071251 7 17 810 FBgn0033482 1240.746667 38.63666667 59.06666667 0.013701427 0.439996549 0.287810384 3 4 3.5 0.15 dme-miR-980-3p 8mer-A1 GGCAGCTA 2R 10095831 10095838 + 2R_10095831_10095838_+ 0.66871864 0.668698529 0.668708585 1.42E-05 CG2269 FBtr0088407|FBtr0305653|FBtr0088408|FBtr0088409 10095242|10095242|10095242|10095242 10096416|10096416|10096416|10096416 2R + 10095811 10095858 3'utr CG2269 FlyBase G14538.1 TGAAAGGCAGAGCTCACATTGGCAGCTAGTCCTCCAAAGTCACCGTCA 17 10095829 0.93294433 3 17 87 1 1.301029996 0.1 0.117647059 0.25 17 0 0 20 2R:10095811-10095858 8 CG2269 FBtr0088408|FBtr0088409|FBtr0088407|FBtr0305653 10095242|10095242|10095242|10095242 10096416|10096416|10096416|10096416 GGCAGCTA 8mer-A1 dme-miR-980-3p 2R + 10095810 10095857 3'utr CG2269 FlyBase G11062.1 ATGAAAGGCAGAGCTCACATTGGCAGCTAGTCCTCCAAAGTCACCGTC 8 10095829 0.968057719 3 8 43 1 1.146128036 0 0.5 0.714285714 8 0 0 14 2R:10095810-10095857 8 12.5 811 FBgn0033484 2.333333333 0.08 0.12 5.357142857 156.25 104.1666667 2 2 2 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 2R 10098489 10098494 + 2R_10098489_10098494_+ 0.897656218 0.911870135 0.904763176 0.010050745 Jra FBtr0088411|FBtr0088410 10098135|10098135 10098556|10098556 2R + 10098453 10098560 3'utr Jra FlyBase G14546.1 GTTATTAGTATAAGCTAGTGTTAATCAAGTATTATCTGTGTTGAACGTAAGATAATATGTAATGTACTTTTAAAATATACGTATATTTTCTGCACTTGATATATACAT 93 10098486 0.988045796 22 84 841 0.914529915 1.330413773 0.444444444 0.239130435 0.401709402 92 6 4 107 2R:10098453-10098560 6 Jra FBtr0088411|FBtr0088410 10098135|10098135 10098556|10098556 TGTGTT 6mer3-8 dme-miR-317-3p 2R + 10098313 10098546 3'utr Jra FlyBase G11068.1 CGAACTCCTGGAGGAGGAGAGCGATAACGAACAGCCTCTGGTGCTCTACATCCTCGCGGACGACGCAACCTGAGGCTTTGTGCCTTTCTTTGGTTTTAGCTGCAATATCTGAAATGCTTCTTAAGTGTTTTGTTTACTTAGTTATTAGTATAAGCTAGTGTTAATCAAGTATTATCTGTGTTGAACGTAAGATAATATGTAATGTACTTTTAAAATATACGTATATTTTCTGCA 109 10098487 0.989263631 39 93 869 0.875776398 0.973127854 0.329192547 0.376146789 0.577639752 109 6 14 141 2R:10098313-10098546 6 48.5 812 FBgn0001291 1037.55 83.52666667 128.0966667 0.046744735 0.580652885 0.378620313 3 2 2.5 0.15 dme-miR-970-3p 6mer2-7 CTTATG 2R 10108425 10108430 + 2R_10108425_10108430_+ 0.842715001 0.988367165 0.915541083 0.102991658 14-3-3zeta FBtr0088418|FBtr0332917|FBtr0088412|FBtr0088414|FBtr0100183|FBtr0088416|FBtr0088419|FBtr0332916|FBtr0088415|FBtr0088417|FBtr0088413 10107621|10107621|10107621|10107621|10107621|10107621|10107621|10107621|10107621|10107621|10107621 10109687|10108474|10109687|10109687|10108474|10108474|10109687|10109687|10109687|10109687|10108474 2R + 10108378 10108462 3'utr 14-3-3zeta FlyBase G14563.1 CAACAACAACCAAGCGAACCAAATGAGAAAACAAAAATAAAAACAAACTTATGTATTATTTGTAATTCTTTTTCTAAACAAATAA 19 10108427 0.97542098 10 18 111 0.956521739 1.342422681 0.304347826 0.210526316 0.347826087 19 1 0 22 2R:10108378-10108462 6 14-3-3zeta FBtr0088419|FBtr0088416|FBtr0088417|FBtr0088413|FBtr0332916|FBtr0088415|FBtr0332917|FBtr0088414|FBtr0088418|FBtr0100183|FBtr0088412 10107621|10107621|10107621|10107621|10107621|10107621|10107621|10107621|10107621|10107621|10107621 10109687|10108474|10109687|10108474|10109687|10109687|10108474|10109687|10109687|10108474|10109687 CTTATG 6mer2-7 dme-miR-970-3p 2R + 10108410 10108466 3'utr 14-3-3zeta FlyBase G11085.1 AAAAATAAAAACAAACTTATGTATTATTTGTAATTCTTTTTCTAAACAAATAAAACC 14 10108426 0.848795061 7 12 124 0.904761905 0.977723605 0.285714286 0.357142857 0.571428571 14 1 1 19 2R:10108410-10108466 6 11 813 FBgn0004907 11710.04 810.41 1245.203333 0.000939365 0.013573376 0.008833899 -2 -1 -1.5 0.15 dme-miR-34-5p 6mer3-8 CACTGC 2R 10137036 10137041 + 2R_10137036_10137041_+ 0.999999971 0.999663052 0.999831511 0.000238224 gem FBtr0346634|FBtr0089758|FBtr0339428|FBtr0089759 10137011|10137011|10137011|10137011 10137472|10137472|10137472|10137472 2R + 10136948 10137059 stop_codon gem FlyBase G14608.1 ACGCGCTGGAGGTGCAGGCCGGCAAGGTGATCCTTAAGCTGATCAACAAGCAGGACAACAACTAAGCGATGTTCTGGCAACGCGTATGCACTGCAGTAGAGACCACCCGAGC 18 10137037 0.946080813 8 16 63 0.9 1.255272505 0.35 0.111111111 0.2 18 2 0 18 2R:10136948-10137059 6 gem FBtr0339428|FBtr0089759|FBtr0346634|FBtr0089758 10137011|10137011|10137011|10137011 10137472|10137472|10137472|10137472 CACTGC 6mer3-8 dme-miR-34-5p 2R + 10136979 10137107 stop_codon gem FlyBase G11114.1 CCTTAAGCTGATCAACAAGCAGGACAACAACTAAGCGATGTTCTGGCAACGCGTATGCACTGCAGTAGAGACCACCCGAGCAATCAAGTATAGTTTATAGCATTTACACGCAGTAAGATGGCACATCGA 13 10137034 0.96976766 10 12 70 0.9375 1.176091259 0.125 0.153846154 0.3125 13 1 0 15 2R:10136979-10137107 6 6.5 814 FBgn0050011 3271.46 66.12333333 101.57 0.00198688 0.098301154 0.063995274 -1 2 0.5 0.15 dme-miR-277-3p 7mer-A1 GCATTTA 2R 10137078 10137084 + 2R_10137078_10137084_+ 0.823270224 0.823348562 0.823309393 5.54E-05 gem FBtr0346634|FBtr0089758|FBtr0339428|FBtr0089759 10137011|10137011|10137011|10137011 10137472|10137472|10137472|10137472 2R + 10137064 10137168 3'utr gem FlyBase G14609.1 AAGTATAGTTTATAGCATTTACACGCAGTAAGATGGCACATCGAAACCGTTTTCTATATAGGTTTTAATTTGTATGAGATTTCGCGCAGCAATTTTGAACAAGTA 27 10137075 0.830986318 14 24 239 0.903225806 1.146128036 0.258064516 0.148148148 0.258064516 27 2 1 28 2R:10137064-10137168 7 gem FBtr0339428|FBtr0089759|FBtr0346634|FBtr0089758 10137011|10137011|10137011|10137011 10137472|10137472|10137472|10137472 GCATTTA 7mer-A1 dme-miR-277-3p 2R + 10136979 10137107 stop_codon gem FlyBase G11114.1 CCTTAAGCTGATCAACAAGCAGGACAACAACTAAGCGATGTTCTGGCAACGCGTATGCACTGCAGTAGAGACCACCCGAGCAATCAAGTATAGTTTATAGCATTTACACGCAGTAAGATGGCACATCGA 13 10137096 0.96976766 10 12 70 0.9375 1.176091259 0.125 0.153846154 0.3125 13 1 0 15 2R:10136979-10137107 7 7 815 FBgn0050011 3271.46 66.12333333 101.57 0.002139717 0.105862782 0.068917988 3 -18 -7.5 0.15 dme-miR-92b-3p 6mer3-8 GTGCAA 2R 10137220 10137225 + 2R_10137220_10137225_+ 0.998516173 0.999668779 0.999092476 0.000815011 gem FBtr0346634|FBtr0089758|FBtr0339428|FBtr0089759 10137011|10137011|10137011|10137011 10137472|10137472|10137472|10137472 2R + 10137172 10137239 3'utr gem FlyBase G14610.1 AGCAAGCAGCCTCTAACCCTGTTCCCTAAAATCTTTGTTAAAGAACTAGTGCAAAATATTTAAGTTTC 59 10137218 0.919208087 6 56 351 0.973684211 1.568201724 0 0.220338983 0.394736842 59 1 1 74 2R:10137172-10137239 6 gem FBtr0339428|FBtr0089759|FBtr0346634|FBtr0089758 10137011|10137011|10137011|10137011 10137472|10137472|10137472|10137472 GTGCAA 6mer3-8 dme-miR-92b-3p 2R + 10137114 10137238 3'utr gem FlyBase G11115.1 TTTCTATATAGGTTTTAATTTGTATGAGATTTCGCGCAGCAATTTTGAACAAGTAAAAAGCAAGCAGCCTCTAACCCTGTTCCCTAAAATCTTTGTTAAAGAACTAGTGCAAAATATTTAAGTTT 30 10137218 0.9808813 7 27 193 0.911764706 1.491361694 0.088235294 0.172413793 0.294117647 29 3 0 31 2R:10137114-10137238 6 28 816 FBgn0050011 3271.46 66.12333333 101.57 0.00855887 0.423451127 0.27567195 2 2 2 0.15 dme-miR-317-3p 8mer-A1 TGTGTTCA 2R 10145966 10145973 - 2R_10145966_10145973_- 0.63112264 0.631119132 0.631120886 2.47E-06 KCNQ FBtr0310097|FBtr0310094|FBtr0299833|FBtr0301443|FBtr0310096|FBtr0310093|FBtr0310095|FBtr0301444 10145895|10145895|10145895|10145895|10145895|10145895|10145895|10145895 10146074|10146074|10146074|10146074|10146074|10146074|10146074|10146074 2R - 10145934 10145989 3'utr KCNQ FlyBase G21678.1 ATTTTGGGACATCATTTGTGTTCAATTAATTGGTAGCAAACAAATGAAAATCAAAC 6 10145974 0.990604435 3 6 60 1 0.77815125 0.166666667 0 0 6 0 0 6 2R:10145934-10145989 8 KCNQ FBtr0310096|FBtr0310093|FBtr0310095|FBtr0301444|FBtr0310097|FBtr0310094|FBtr0299833|FBtr0301443 10145895|10145895|10145895|10145895|10145895|10145895|10145895|10145895 10146074|10146074|10146074|10146074|10146074|10146074|10146074|10146074 TGTGTTCA 8mer-A1 dme-miR-317-3p 2R - 10145935 10145988 3'utr KCNQ FlyBase G16451.1 TTTTGGGACATCATTTGTGTTCAATTAATTGGTAGCAAACAAATGAAAATCAAA 7 10145974 0.987785899 4 7 55 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 2R:10145935-10145988 8 4.5 817 FBgn0033494 83.10666667 3.453333333 5.296666667 0.054147281 1.303088803 0.849590938 1 1 1 0.15 dme-bantam-3p 6mer3-8 TGATCT 2R 10156573 10156578 - 2R_10156573_10156578_- 0.984209136 0.980995407 0.982602271 0.002272429 mlt FBtr0088370|FBtr0331945|FBtr0088369 10156388|10155914|10156388 10156669|10156669|10156669 2R - 10156567 10156607 3'utr mlt FlyBase G21682.1 CTTCGTCCCCCGCCTGGTGCTACAACTTGTGATCTTGTACA 18 10156581 0.64123762 6 18 151 1 1.397940009 0.4 0.333333333 0.52 18 0 0 25 2R:10156567-10156607 6 mlt FBtr0331945|FBtr0088369|FBtr0088370 10155914|10156388|10156388 10156669|10156669|10156669 TGATCT 6mer3-8 dme-bantam-3p 2R - 10156569 10156592 3'utr mlt FlyBase G16454.1 GGTGCTACAACTTGTGATCTTGTA 10 10156572 0.675230975 4 8 74 0.833333333 0.698970004 0.416666667 0.2 0.333333333 10 1 1 10 2R:10156569-10156592 6 14 818 FBgn0265512 12.66666667 0.613333333 0.95 1.105263158 22.82608696 14.73684211 3 -6 -1.5 0.15 dme-miR-283-5p 8mer-m1 TGATATTT 2R 10307099 10307106 - 2R_10307099_10307106_- 0.481630701 0.486633822 0.484132262 0.003537726 JhI-1 FBtr0088360 10307028 10307304 2R - 10307089 10307145 3'utr JhI-1 FlyBase G21693.1 AATTAATAGGGCACCTTTGCTTGTATCTGTATATGCTTGTGATATTTGCATTTGCAT 26 10307109 0.993419074 8 22 278 0.805555556 0.763427994 0.194444444 0.346153846 0.527777778 26 3 4 29 2R:10307089-10307145 8 JhI-1 FBtr0088360 10307028 10307304 TGATATTT 8mer-m1 dme-miR-283-5p 2R - 10307090 10307121 3'utr JhI-1 FlyBase G16459.1 ATCTGTATATGCTTGTGATATTTGCATTTGCA 15 10307109 0.675132212 6 13 142 0.857142857 0.653212514 0.19047619 0.333333333 0.523809524 15 0 3 18 2R:10307090-10307121 8 18.5 819 FBgn0028426 503.2766667 22.61333333 34.73333333 0.036759105 0.818101415 0.532629559 3 3 3 0.15 dme-miR-965-3p 8mer-A1 TACGCTTA 2R 10469472 10469479 + 2R_10469472_10469479_+ 0.625364799 0.625354772 0.625359786 7.07E-06 CG11777 FBtr0088273 10469445 10469643 2R + 10469375 10469489 stop_codon CG11777 FlyBase G14666.1 AAGAACTATCGTCCCCATGTGGACAAGAAGATCAATGGAGTAACTATACATGCCAATCCTTTGGCGACGTGATAGAGATAGAGACAAAGGCCAATCGTACGCTTAAAATGAAATA 26 10469470 0.94123465 13 26 99 1 1.491361694 0.129032258 0.192307692 0.322580645 26 0 0 31 2R:10469375-10469489 8 CG11777 FBtr0088273 10469445 10469643 TACGCTTA 8mer-A1 dme-miR-965-3p 2R + 10469432 10469486 stop_codon CG11777 FlyBase G11166.1 CCTTTGGCGACGTGATAGAGATAGAGACAAAGGCCAATCGTACGCTTAAAATGAA 17 10469471 0.907770258 4 13 57 0.857142857 0.954242509 0.142857143 0.235294118 0.380952381 17 2 1 18 2R:10469432-10469486 8 8.5 820 FBgn0033527 170.1366667 31.64666667 48.74 0.049959836 0.268590689 0.174394748 2 1 1.5 0.15 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 10481832 10481839 + 2R_10481832_10481839_+ 0.60556372 0.591970296 0.598767008 0.009611985 CG17765 FBtr0088274 10481588 10481886 2R + 10481747 10481856 3'utr CG17765 FlyBase G14674.2 ATCACTCCACAGTCATATTGCAATCTCCTGGTATCAGAATCAAATTTCAAAAGTATTTGTTAACGCAGTTCGACTCAATAATCATAGTACAAAGTCTCTTGCGCCTAATA 47 10481830 0.979817235 12 44 323 0.948275862 1.740362689 0.103448276 0.191489362 0.344827586 47 3 0 55 2R:10481747-10481856 8 CG17765 FBtr0088274 10481588 10481886 AGTACAAA 8mer-A1 dme-miR-305-5p 2R + 10481660 10481855 3'utr CG17765 FlyBase G11170.1 ACAGCCAACAGTGGATGATCATAAATTTCGCGACTGGTGCATTTTTCTTAAATTTTCAACGGTGTTAGCTTTTTAATATGTAAATGAATCACTCCACAGTCATATTGCAATCTCCTGGTATCAGAATCAAATTTCAAAAGTATTTGTTAACGCAGTTCGACTCAATAATCATAGTACAAAGTCTCTTGCGCCTAAT 36 10481830 0.984866267 19 35 289 0.98 1.69019608 0.12 0.25 0.46 36 1 0 49 2R:10481660-10481855 8 22 821 FBgn0033529 2313.66 293.68 451.0566667 0.009508744 0.074911468 0.048774359 2 2 2 0.15 dme-miR-31a-5p 8mer-A1 TCTTGCCA 2R 10491536 10491543 - 2R_10491536_10491543_- 0.609294823 0.630233107 0.619763965 0.014805614 lola FBtr0089361 10491258 10491941 2R - 10491523 10491581 5'utr lola FlyBase G21738.1 TAGTTCTACTGTGGTTGGTGTTCTCAAAACTCAAATATTCTTGCCAGCAATTAGGGCTT 11 10491544 0.982935464 5 10 82 0.916666667 1.041392685 0.083333333 0.090909091 0.166666667 11 1 0 11 2R:10491523-10491581 8 lola FBtr0089361 10491258 10491941 TCTTGCCA 8mer-A1 dme-miR-31a-5p 2R - 10491534 10491578 5'utr lola FlyBase G16492.1 TTCTACTGTGGTTGGTGTTCTCAAAACTCAAATATTCTTGCCAGC 6 10491544 0.982279788 3 5 40 0.888888889 0.602059991 0 0.333333333 0.555555556 6 0 1 8 2R:10491534-10491578 8 5.5 822 FBgn0005630 6593.74 266.74 407.4566667 0.000834124 0.02061933 0.013498368 1 1 1 0.15 dme-bantam-3p 8mer-A1 TGATCTCA 2R 10496614 10496621 - 2R_10496614_10496621_- 0.630895014 0.630952844 0.630923929 4.09E-05 lola FBtr0089360 10496293 10497178 2R - 10496594 10496646 5'utr lola FlyBase G21752.1 TGTATAAATCCTTAGGAAAACTCAATGATCTCAATGAACTTTTTCTTGATTTT 473 10496621 0.767112619 8 457 2259 0.964028777 1.72916479 0.215827338 0.150105708 0.276978417 473 11 9 536 2R:10496594-10496646 8 lola FBtr0089360 10496293 10497178 TGATCTCA 8mer-A1 dme-bantam-3p 2R - 10496595 10496650 5'utr lola FlyBase G16503.1 GATGTGTATAAATCCTTAGGAAAACTCAATGATCTCAATGAACTTTTTCTTGATTT 375 10496621 0.763432461 6 366 1827 0.97810219 2.030194785 0.260948905 0.309333333 0.527372263 375 8 4 536 2R:10496595-10496650 8 422.5 823 FBgn0005630 6593.74 266.74 407.4566667 0.064075927 1.583939417 1.036920081 0 0 0 0.15 dme-bantam-3p 6mer3-8 TGATCT 2R 10496953 10496958 - 2R_10496953_10496958_- 0.962635301 0.961552341 0.962093821 0.000765797 lola FBtr0089360 10496293 10497178 2R - 10496929 10497062 5'utr lola FlyBase G21753.1 AGGTTTCGGGTCCTTAGTGCCGGGTTTGCTTCAGTCTGAGTCCAAAGTCCTAATCACACAGAGTTCAGTCCAGTCCAGAGCGCGGTTTTGTGTAATTTTCCAAATGATCTTGAAACATATAGTCGTCTTTACAC 125 10496958 0.979930108 14 122 852 0.979310345 2.152288344 0.103448276 0.152 0.268965517 125 3 0 142 2R:10496929-10497062 6 lola FBtr0089360 10496293 10497178 TGATCT 6mer3-8 dme-bantam-3p 2R - 10496931 10497019 5'utr lola FlyBase G16504.1 AAAGTCCTAATCACACAGAGTTCAGTCCAGTCCAGAGCGCGGTTTTGTGTAATTTTCCAAATGATCTTGAAACATATAGTCGTCTTTAC 95 10496958 0.846201207 12 95 650 1 2.100370545 0.023809524 0.273684211 0.452380952 95 0 0 126 2R:10496931-10497019 6 87 824 FBgn0005630 6593.74 266.74 407.4566667 0.013194333 0.326160306 0.213519638 0 0 0 0.15 dme-miR-282-5p 6mer2-7 GAGGCT 2R 10507648 10507653 - 2R_10507648_10507653_- 0.999921525 0.999737399 0.999829462 0.000130178 lola FBtr0343132|FBtr0089350 10507241|10507421 10508346|10508346 2R - 10507630 10507688 5'utr lola FlyBase G21774.1 AAAAATTGAAGAAAATTGTAAACTTATCTATATTGGAGGCTTGCAAAAATAATTTTGTA 106 10507655 0.982049653 8 104 801 0.985507246 2.133538908 0 0.283018868 0.449275362 106 2 0 136 2R:10507630-10507688 6 lola FBtr0089350|FBtr0343132 10507421|10507241 10508346|10508346 GAGGCT 6mer2-7 dme-miR-282-5p 2R - 10507625 10507671 5'utr lola FlyBase G16523.1 GTAAACTTATCTATATTGGAGGCTTGCAAAAATAATTTTGTAAGAAT 81 10507655 0.799882612 4 79 595 1 2.08278537 0.008264463 0.3875 0.595041322 80 0 0 121 2R:10507625-10507671 6 91 825 FBgn0005630 6593.74 266.74 407.4566667 0.013800969 0.341156182 0.223336633 2 2 2 0.15 dme-miR-2a-2-5p 6mer3-8 TGATGA 2R 10515463 10515468 - 2R_10515463_10515468_- 0.999779201 0.851962837 0.925871019 0.104521979 lola FBtr0089348 10515012 10515540 2R - 10515423 10515601 stop_codon lola FlyBase G21804.1 ACAAAGCTCCCACCTAAAGCGACACCTTGAGAGCGGTGTCTGTGTCAAATATTACTTATGAGATAATGTTTTCTTTAAAATCAAATAGAATAAGCGTTATCCCAATAGGCAGAAGATCAACTGATGATCGAAATGATGATCATGAAAATGAAGATGTAGAACATGAACAAGATTATATA 38 10515467 0.969055673 16 37 211 0.97826087 1.653212514 0.239130435 0.184210526 0.326086957 38 1 0 45 2R:10515423-10515601 6 lola FBtr0089348 10515012 10515540 TGATGA 6mer3-8 dme-miR-2a-2-5p 2R - 10515452 10515495 5'utr lola FlyBase G16540.1 AGGCAGAAGATCAACTGATGATCGAAATGATGATCATGAAAATG 6 10515467 0.944063275 3 6 26 1 0.954242509 0.333333333 0.333333333 0.555555556 6 0 0 9 2R:10515452-10515495 6 8 826 FBgn0005630 6593.74 266.74 407.4566667 0.001213272 0.029991752 0.01963399 -1 -1 -1 0.15 dme-miR-1003-3p 7mer-A1 TGTGAGA 2R 10615726 10615732 + 2R_10615726_10615732_+ 0.813039932 0.812390664 0.812715298 0.000459054 psq FBtr0088278|FBtr0346958|FBtr0088282|FBtr0330607|FBtr0100606|FBtr0088281|FBtr0088277|FBtr0088276|FBtr0088275|FBtr0100607|FBtr0088280|FBtr0088279 10614840|10614840|10614840|10615080|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840 10616248|10617280|10616248|10617280|10616248|10616248|10616248|10616248|10616248|10616248|10616248|10616248 2R + 10615703 10615790 3'utr psq FlyBase G14696.1 GCTTTGTTATAATTTTCGCTTAGTGTGAGACTGAAAGTGCGCCTAAAACTGTTGAAAAACCCCATGCCCAATATTATAGTGAAGACGC 377 10615728 0.968846894 15 358 2591 0.947867299 1.903089987 0.462085308 0.103448276 0.199052133 377 18 4 400 2R:10615703-10615790 7 psq FBtr0088275|FBtr0088280|FBtr0088277|FBtr0100607|FBtr0088276|FBtr0088279|FBtr0100606|FBtr0088281|FBtr0088278|FBtr0346958|FBtr0088282|FBtr0330607 10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10615080 10616248|10616248|10616248|10616248|10616248|10616248|10616248|10616248|10616248|10617280|10616248|10617280 TGTGAGA 7mer-A1 dme-miR-1003-3p 2R + 10615704 10615758 3'utr psq FlyBase G11187.1 CTTTGTTATAATTTTCGCTTAGTGTGAGACTGAAAGTGCGCCTAAAACTGTTGAA 196 10615728 0.846520173 10 175 1334 0.904761905 1.822821645 0.510204082 0.397959184 0.598639456 196 25 3 266 2R:10615704-10615758 7 267.5 827 FBgn0263102 4429.833333 90.05333333 137.5466667 0.060386019 2.970461948 1.944794494 -2 -2 -2 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 10615884 10615889 + 2R_10615884_10615889_+ 0.937577933 0.981196274 0.959387103 0.030842866 psq FBtr0088278|FBtr0346958|FBtr0088282|FBtr0330607|FBtr0100606|FBtr0088281|FBtr0088277|FBtr0088276|FBtr0088275|FBtr0100607|FBtr0088280|FBtr0088279 10614840|10614840|10614840|10615080|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840 10616248|10617280|10616248|10617280|10616248|10616248|10616248|10616248|10616248|10616248|10616248|10616248 2R + 10615870 10615929 3'utr psq FlyBase G14697.2 TAACGTAGAATTAAACCAAATTATCAAGGTTCTAGAACTTAAATCATTAGCTTGTAACGA 56 10615893 0.718426822 9 53 407 0.951612903 1.469822016 0.129032258 0.107142857 0.193548387 56 2 1 59 2R:10615870-10615929 6 psq FBtr0088275|FBtr0088280|FBtr0088277|FBtr0100607|FBtr0088276|FBtr0088279|FBtr0100606|FBtr0088281|FBtr0088278|FBtr0346958|FBtr0088282|FBtr0330607 10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10615080 10616248|10616248|10616248|10616248|10616248|10616248|10616248|10616248|10616248|10617280|10616248|10617280 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 10615807 10615916 3'utr psq FlyBase G11188.1 ACATGAATCAAATGCTTTATAACCATATTGTTTGAACAGATAGAACGAAGTGGGAGAATACCTTAACGTAGAATTAAACCAAATTATCAAGGTTCTAGAACTTAAATCAT 44 10615892 0.982648134 11 41 306 0.968253968 1.785329835 0.206349206 0.295454545 0.507936508 44 2 0 61 2R:10615807-10615916 6 43 828 FBgn0263102 4429.833333 90.05333333 137.5466667 0.009706911 0.477494818 0.312621171 -9 -8 -8.5 0.15 dme-miR-33-5p 7mer-A1 AATGCAA 2R 10616732 10616738 + 2R_10616732_10616738_+ 0.492681238 0.407563231 0.450122235 0.060187515 psq FBtr0346958|FBtr0330607 10614840|10615080 10617280|10617280 2R + 10616615 10616759 3'utr psq FlyBase G14703.1 ATACATTTGAATAGATTTTTTTAGTTGTTAGCTGACCTAGGGGAACAGGTATCTGAATATTATAAAAATCAAATGTTGCAAATTAATTTATTTTAGCGTTATAGACCCGTAGAACTGAATGCAATATGCTTACCTTAAAACTCAA 73 10616731 0.802353941 22 71 417 0.988764045 1.944482672 0.123595506 0.205479452 0.348314607 73 1 0 88 2R:10616615-10616759 7 psq FBtr0346958|FBtr0330607 10614840|10615080 10617280|10617280 AATGCAA 7mer-A1 dme-miR-33-5p 2R + 10616621 10616754 3'utr psq FlyBase G11192.1 TTGAATAGATTTTTTTAGTTGTTAGCTGACCTAGGGGAACAGGTATCTGAATATTATAAAAATCAAATGTTGCAAATTAATTTATTTTAGCGTTATAGACCCGTAGAACTGAATGCAATATGCTTACCTTAAAA 67 10616732 0.971410383 18 62 370 0.923913043 1.929418926 0.195652174 0.28358209 0.47826087 67 7 0 85 2R:10616621-10616754 7 51.5 829 FBgn0263102 4429.833333 90.05333333 137.5466667 0.01162572 0.571883328 0.374418379 1 0 0.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2R 10640934 10640939 + 2R_10640934_10640939_+ 0.813434543 0.874222822 0.843828683 0.042983819 CG11883 FBtr0113063|FBtr0088284|FBtr0339461|FBtr0088283 10640587|10640725|10640587|10640587 10640990|10640990|10641807|10640990 2R + 10640818 10640957 3'utr CG11883 FlyBase G14708.1 GTTTATTGTTAATGCTCCACTGTTTTTTTCGGCTAAGTTTCGTTGTGAACGTTTGTAAGACTTCCCCAGAGATATTGATATTGATATTGTATATGATGCATGTGTAGTGAGTACGTGTACCTAAAGCTTACCGCTAGTTT 80 10640933 0.917121354 11 78 632 0.978021978 1.648360011 0.230769231 0.1125 0.21978022 80 1 1 89 2R:10640818-10640957 6 CG11883 FBtr0088283|FBtr0339461|FBtr0088284|FBtr0113063 10640587|10640587|10640725|10640587 10640990|10641807|10640990|10640990 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2R + 10640911 10640955 3'utr CG11883 FlyBase G11195.2 TGATGCATGTGTAGTGAGTACGTGTACCTAAAGCTTACCGCTAGT 25 10640933 0.807858948 4 24 144 0.970588235 1.51851394 0 0.32 0.5 25 1 0 33 2R:10640911-10640955 6 29 830 FBgn0033538 276.0933333 9.15 14.24666667 0.105036944 3.169398907 2.035563875 1 1 1 0.15 dme-miR-34-5p 6mer2-7 ACTGCC 2R 10737392 10737397 + 2R_10737392_10737397_+ 0.946823285 0.91755322 0.932188253 0.020697086 CG7220 FBtr0088216|FBtr0088217|FBtr0339465|FBtr0088219 10737369|10737369|10737369|10737369 10738370|10738370|10738370|10738370 2R + 10737378 10737432 5'utr-coding CG7220 FlyBase G14718.1 TGCCATTTACTAATACTGCCTGCTATTGTTTGCTTTGCGCATCCAACCAAAAAAA 15 10737391 0.988080887 6 14 139 0.863636364 0.67669361 0.045454545 0.2 0.454545455 15 0 3 19 2R:10737378-10737432 6 CG7220 FBtr0339465|FBtr0088219|FBtr0088216|FBtr0088217 10737369|10737369|10737369|10737369 10738370|10738370|10738370|10738370 ACTGCC 6mer2-7 dme-miR-34-5p 2R + 10737363 10737424 stop_codon CG7220 FlyBase G11200.1 CTGTTTAGTTAAAATTGCCATTTACTAATACTGCCTGCTATTGTTTGCTTTGCGCATCCAAC 10 10737390 0.986760763 7 10 90 1 1.176091259 0 0.3 0.533333333 10 0 0 15 2R:10737363-10737424 6 10 831 FBgn0033544 368.3233333 29.77 45.41666667 0.027150058 0.335908633 0.220183486 1 2 1.5 0.15 dme-miR-999-3p 6mer3-8 AGTTAA 2R 10737984 10737989 + 2R_10737984_10737989_+ 0.999368391 0.973989082 0.986678736 0.017945875 CG7220 FBtr0088216|FBtr0088217|FBtr0339465|FBtr0088219 10737369|10737369|10737369|10737369 10738370|10738370|10738370|10738370 2R + 10737959 10737998 3'utr CG7220 FlyBase G14722.1 TGAGAAGCAAAACTCATGCGATCATAGTTAAGATTATGAC 8 10737975 0.953794436 2 8 43 1 1.041392685 0.272727273 0.25 0.454545455 8 0 0 11 2R:10737959-10737998 6 CG7220 FBtr0339465|FBtr0088219|FBtr0088216|FBtr0088217 10737369|10737369|10737369|10737369 10738370|10738370|10738370|10738370 AGTTAA 6mer3-8 dme-miR-999-3p 2R + 10737973 10738050 3'utr CG7220 FlyBase G11202.1 CATGCGATCATAGTTAAGATTATGACATTTTAAATGTATTAGCAGCCATATCCCCGATCGCTCTCATTGTCACCAGTC 12 10737986 0.979170694 9 10 75 0.882352941 1.176091259 0.411764706 0.333333333 0.529411765 12 2 0 15 2R:10737973-10738050 6 5.5 832 FBgn0033544 368.3233333 29.77 45.41666667 0.014932532 0.184749748 0.121100917 9 -2 3.5 0.15 dme-miR-965-3p 7mer-A1 ACGCTTA 2R 10738705 10738711 - 2R_10738705_10738711_- 0.823349561 0.823349486 0.823349523 7.07E-08 Mat1 FBtr0088255 10738615 10738757 2R - 10738666 10738747 3'utr Mat1 FlyBase G21856.1 AAATATCCTTTAATGGTCGCACAACCAGAGCACTGAACGCTTAATTTTGTTGAACAAATGTGTCCTATACGAATCCATTCAG 53 10738703 0.967739616 10 51 303 0.95 1.755874856 0.116666667 0.113207547 0.216666667 53 3 0 57 2R:10738666-10738747 7 Mat1 FBtr0088255 10738615 10738757 ACGCTTA 7mer-A1 dme-miR-965-3p 2R - 10738625 10738736 3'utr Mat1 FlyBase G16585.1 AATGGTCGCACAACCAGAGCACTGAACGCTTAATTTTGTTGAACAAATGTGTCCTATACGAATCCATTCAGTTAACTCGTAACTTAATATATGTTAAATAAATAAATGCTAT 54 10738703 0.760862295 14 53 312 0.987951807 1.612783857 0.048192771 0.37037037 0.590361446 54 0 1 82 2R:10738625-10738736 7 43 833 FBgn0024956 305.3266667 31.30333333 48.17 0.140832769 1.373655628 0.892671787 -8 -8 -8 0.15 dme-miR-7-5p 6mer2-7 TCTTCC 2R 10740586 10740591 - 2R_10740586_10740591_- 0.988013703 0.999999636 0.99400667 0.008475311 CG33144 FBtr0088254|FBtr0302517 10740394|10740052 10740928|10740928 2R - 10740532 10740612 3'utr CG33144 FlyBase G21863.1 CTGTATAAATCGAGTAGGTTCTCTTCCTAGCGCATAAGTTAGTCTAAATATATTAGGAGTACGCCTCGTATTGCAACAGTG 11 10740589 0.766086641 3 10 91 0.923076923 1.079181246 0.153846154 0.181818182 0.307692308 11 1 0 12 2R:10740532-10740612 6 CG33144 FBtr0302517|FBtr0088254 10740052|10740394 10740928|10740928 TCTTCC 6mer2-7 dme-miR-7-5p 2R - 10740578 10740608 3'utr CG33144 FlyBase G16589.1 ATAAATCGAGTAGGTTCTCTTCCTAGCGCAT 5 10740590 0.932209028 3 4 29 0.833333333 0.698970004 0.333333333 0.2 0.333333333 5 1 0 5 2R:10740578-10740608 6 6 834 FBgn0053144 479.6233333 12.36 18.86333333 0.012509817 0.485436893 0.318077399 -2 -1 -1.5 0.15 dme-miR-283-5p 8mer-m1 TGATATTT 2R 10740761 10740768 - 2R_10740761_10740768_- 0.527919156 0.537520819 0.532719987 0.006789356 CG33144 FBtr0088254|FBtr0302517 10740394|10740052 10740928|10740928 2R - 10740705 10740808 3'utr CG33144 FlyBase G21864.1 AGTTATTACAATTATAATTGTATATGTGTTAACTAAATTGTGATATTTACAGTGATTCGATTTCTAATTGAATCGACAAATTTGTTGAGAACCTATACAAAGAC 118 10740771 0.99070226 17 110 1145 0.946666667 1.45331834 0.573333333 0.220338983 0.386666667 118 4 4 142 2R:10740705-10740808 8 CG33144 FBtr0302517|FBtr0088254 10740052|10740394 10740928|10740928 TGATATTT 8mer-m1 dme-miR-283-5p 2R - 10740732 10740882 3'utr CG33144 FlyBase G16590.1 AGCCTGTAAATGCAGCTGCTGTAATTACTGGTAGTTTCTATTGTTAATGACGACAGCTTACGTACATTTATTTTAGTTATTACAATTATAATTGTATATGTGTTAACTAAATTGTGATATTTACAGTGATTCGATTTCTAATTGAATCGAC 94 10740771 0.990140207 20 90 895 0.950704225 2.130333768 0.521126761 0.361702128 0.577464789 94 7 0 135 2R:10740732-10740882 8 95 835 FBgn0053144 479.6233333 12.36 18.86333333 0.198072098 7.686084142 5.036225482 3 3 3 0.15 dme-bantam-3p 6mer3-8 TGATCT 2R 10815752 10815757 + 2R_10815752_10815757_+ 0.999756923 0.99982013 0.999788526 4.47E-05 CG7222 FBtr0088223|FBtr0345945 10815109|10815109 10815781|10815781 2R + 10815711 10815807 3'utr CG7222 FlyBase G14735.1 ATACAGAGTTCATAAGCCGCATGTCTATCAAAACACCAAAATGATCTGTTATCAATAAATATATGTACTTGACATTCTGATATTTACACATGCATAA 282 10815752 0.908737901 17 275 1699 0.973529412 2.042706739 0.017647059 0.187943262 0.326470588 282 7 2 331 2R:10815711-10815807 6 CG7222 FBtr0088223|FBtr0345945 10815109|10815109 10815781|10815781 TGATCT 6mer3-8 dme-bantam-3p 2R + 10815729 10815797 3'utr CG7222 FlyBase G11215.1 GCATGTCTATCAAAACACCAAAATGATCTGTTATCAATAAATATATGTACTTGACATTCTGATATTTAC 149 10815752 0.899534462 9 144 862 0.958333333 2.315970345 0.009259259 0.33557047 0.541666667 149 9 0 207 2R:10815729-10815797 6 199 836 FBgn0033551 801.0633333 64.22666667 98.17333333 0.248419809 3.098401495 2.027027027 0 0 0 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 10839439 10839444 - 2R_10839439_10839444_- 0.755363009 0.755362777 0.755362893 1.41E-07 CG30015 FBtr0113357|FBtr0113357|FBtr0113357|FBtr0306393|FBtr0306393|FBtr0306393|FBtr0331939|FBtr0331939|FBtr0331939|FBtr0088243|FBtr0088243|FBtr0088243|FBtr0113356|FBtr0113356|FBtr0113356|FBtr0331938|FBtr0331938|FBtr0331938|FBtr0088242|FBtr0088242|FBtr0088242 10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100 10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902 2R - 10839314 10839518 3'utr CG30015 FlyBase G21898.1 CTGTGCATGTCGAAAAATGTTTTGAAATAAACTAAATTACGTCTATTAATTGAGAGTCAAGAAAACTGTAAGGACTGTGAGTATAATTACGCGTAGCAAGGAGCCTGATATTCGAAACATTTGATTTACTTTAAGTTGATAATTTGCAAGCTTTTAATTGGTAGAAGAGATTGATTTTACTATTTAGACTAACTATTATTACTTA 61 10839451 0.980851047 19 54 398 0.918918919 1.531478917 0.202702703 0.163934426 0.310810811 61 5 1 68 2R:10839314-10839518 6 CG30015 FBtr0331939|FBtr0331939|FBtr0331939|FBtr0306393|FBtr0306393|FBtr0306393|FBtr0113357|FBtr0113357|FBtr0113357|FBtr0088242|FBtr0088242|FBtr0088242|FBtr0331938|FBtr0331938|FBtr0331938|FBtr0113356|FBtr0113356|FBtr0113356|FBtr0088243|FBtr0088243|FBtr0088243 10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100 10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 10839349 10839480 3'utr CG30015 FlyBase G16612.1 ACGTCTATTAATTGAGAGTCAAGAAAACTGTAAGGACTGTGAGTATAATTACGCGTAGCAAGGAGCCTGATATTCGAAACATTTGATTTACTTTAAGTTGATAATTTGCAAGCTTTTAATTGGTAGAAGAGA 45 10839441 0.971497802 14 38 236 0.884057971 1.484299839 0.202898551 0.422222222 0.623188406 45 7 1 61 2R:10839349-10839480 6 31.5 837 FBgn0050015 810.93 16.1 24.71 0.03884429 1.956521739 1.274787535 7 -3 2 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2R 10839852 10839857 - 2R_10839852_10839857_- 0.954023708 0.994669483 0.974346596 0.028740921 CG30015 FBtr0113357|FBtr0306393|FBtr0331939|FBtr0088243|FBtr0113356|FBtr0331938|FBtr0088242 10839100|10839100|10839100|10839100|10839100|10839100|10839100 10839902|10839902|10839902|10839902|10839902|10839902|10839902 2R - 10839799 10839879 3'utr CG30015 FlyBase G21902.1 TAAATACTCCGCCGACCAGACTGTACCTAGCCTAGCTGCAATCCAAGTGCTTTTGTCTAGTGATGCGCTCTCCTTCAAGCA 27 10839858 0.917414661 8 25 135 0.933333333 1.146128036 0.1 0.111111111 0.2 27 1 1 28 2R:10839799-10839879 6 CG30015 FBtr0331939|FBtr0306393|FBtr0113357|FBtr0088242|FBtr0331938|FBtr0113356|FBtr0088243 10839100|10839100|10839100|10839100|10839100|10839100|10839100 10839902|10839902|10839902|10839902|10839902|10839902|10839902 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2R - 10839825 10839875 3'utr CG30015 FlyBase G16614.1 TACTCCGCCGACCAGACTGTACCTAGCCTAGCTGCAATCCAAGTGCTTTTG 18 10839858 0.887153548 6 14 76 0.964285714 1.431363764 0.214285714 0.388888889 0.607142857 18 1 0 27 2R:10839825-10839875 6 15 838 FBgn0050015 810.93 16.1 24.71 0.018497281 0.931677019 0.607041684 1 1 1 0.15 dme-miR-307a-3p 7mer-A1 GTTGTGA 2R 10892582 10892588 + 2R_10892582_10892588_+ 0.823328806 0.762535985 0.792932395 0.042987001 CG30020 FBtr0088235|FBtr0339521 10892557|10892557 10893191|10892787 2R + 10892544 10892592 stop_codon CG30020 FlyBase G14783.1 AATGGGCAGCCCTAAGGAGCTGACGATAATTCCAAGTAGTTGTGAACTT 6 10892572 0.971432831 4 6 35 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2R:10892544-10892592 7 CG30020 FBtr0339521|FBtr0088235 10892557|10892557 10892787|10893191 GTTGTGA 7mer-A1 dme-miR-307a-3p 2R + 10892558 10892593 3'utr CG30020 FlyBase G11252.1 AGGAGCTGACGATAATTCCAAGTAGTTGTGAACTTA 7 10892573 0.984597105 4 5 44 0.705882353 0.602059991 0.117647059 1 1 7 3 2 12 2R:10892558-10892593 7 5.5 839 FBgn0050020 876.3433333 22.63666667 34.61333333 0.006276079 0.242968635 0.158898305 10 9 9.5 0.15 dme-miR-276a-3p 6mer2-7 GTTCCT 2R 10892656 10892661 + 2R_10892656_10892661_+ 0.982155311 0.997276114 0.989715713 0.01069202 CG30020 FBtr0088235|FBtr0339521 10892557|10892557 10893191|10892787 2R + 10892617 10892678 3'utr CG30020 FlyBase G14784.1 AATCGCACAATGTACAAAGTTTGATATAGTCTAAGTACTGTTCCTCTCCATCATTTTAGCAC 27 10892658 0.953747423 9 24 219 0.9 0.954242509 0.166666667 0.074074074 0.166666667 27 1 2 27 2R:10892617-10892678 6 CG30020 FBtr0339521|FBtr0088235 10892557|10892557 10892787|10893191 GTTCCT 6mer2-7 dme-miR-276a-3p 2R + 10892614 10892674 3'utr CG30020 FlyBase G11253.1 AGTAATCGCACAATGTACAAAGTTTGATATAGTCTAAGTACTGTTCCTCTCCATCATTTTA 21 10892658 0.987162652 9 19 163 0.942857143 1.51851394 0.028571429 0.476190476 0.685714286 21 2 0 33 2R:10892614-10892674 6 19 840 FBgn0050020 876.3433333 22.63666667 34.61333333 0.021681 0.839346193 0.548921418 -2 -2 -2 0.15 dme-miR-970-3p 6mer3-8 TCTTAT 2R 10892735 10892740 + 2R_10892735_10892740_+ 0.998214799 0.998885674 0.998550236 0.000474398 CG30020 FBtr0088235|FBtr0339521 10892557|10892557 10893191|10892787 2R + 10892698 10892750 3'utr CG30020 FlyBase G14785.1 TCTTGTTAAGTTCTAGACTAGGACATTAAACACAATCTCTTATACAAAATTAG 23 10892737 0.970543825 3 22 155 0.9375 1 0.03125 0.217391304 0.4375 23 0 2 30 2R:10892698-10892750 6 CG30020 FBtr0339521|FBtr0088235 10892557|10892557 10892787|10893191 TCTTAT 6mer3-8 dme-miR-970-3p 2R + 10892706 10892754 3'utr CG30020 FlyBase G11254.1 AGTTCTAGACTAGGACATTAAACACAATCTCTTATACAAAATTAGTTGA 19 10892737 0.685025049 5 19 129 1 1.397940009 0.04 0.210526316 0.4 19 0 0 25 2R:10892706-10892754 6 20.5 841 FBgn0050020 876.3433333 22.63666667 34.61333333 0.023392658 0.905610367 0.592257319 -2 -2 -2 0.15 dme-miR-34-5p 8mer-A1 CACTGCCA 2R 10982737 10982744 - 2R_10982737_10982744_- 0.678406774 0.678406984 0.678406879 1.41E-07 luna FBtr0333066 10977954 10983297 2R - 10982717 10982767 3'utr luna FlyBase G21935.1 TTAATAATAATTTTGTTTTCATACACTGCCAAAATGAAAATGTAAAAAAAG 35 10982747 0.792800699 7 33 279 0.952380952 1.602059991 0.214285714 0.2 0.333333333 35 2 0 40 2R:10982717-10982767 8 luna FBtr0333066 10977954 10983297 CACTGCCA 8mer-A1 dme-miR-34-5p 2R - 10982726 10982762 3'utr luna FlyBase G16633.1 AATAATTTTGTTTTCATACACTGCCAAAATGAAAATG 24 10982747 0.750660855 7 24 161 1 1.505149978 0.5 0.291666667 0.46875 24 0 0 32 2R:10982726-10982762 8 29 842 FBgn0040765 1623.386667 50.45666667 77.46666667 0.017863889 0.574750611 0.374354561 3 3 3 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2R 10982848 10982854 - 2R_10982848_10982854_- 0.671778485 0.667845171 0.669811828 0.002781263 luna FBtr0333066|FBtr0088210|FBtr0345675 10977954|10982792|10982792 10983297|10983297|10983297 2R - 10982829 10982879 3'utr luna FlyBase G21936.1 AAACAGCAAAAATTGTGTACAATTTACCAAAGCTAAGCTGATTTCTTTAAT 20 10982855 0.946450111 4 17 119 0.92 1.361727836 0.36 0.2 0.36 20 2 0 23 2R:10982829-10982879 7 luna FBtr0333066|FBtr0088210|FBtr0345675 10977954|10982792|10982792 10983297|10983297|10983297 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 10982834 10982868 3'utr luna FlyBase G16634.1 ATTGTGTACAATTTACCAAAGCTAAGCTGATTTCT 10 10982855 0.676690805 5 9 63 0.923076923 1.079181246 0.538461538 0.3 0.461538462 10 1 0 12 2R:10982834-10982868 7 14.5 843 FBgn0040765 1623.386667 50.45666667 77.46666667 0.008931945 0.287375306 0.187177281 1 1 1 0.15 dme-miR-305-3p 7mer-A1 TGTGCCA 2R 10983211 10983217 - 2R_10983211_10983217_- 0.500854969 0.546906478 0.523880724 0.032563328 luna FBtr0333066|FBtr0088210|FBtr0345675 10977954|10982792|10982792 10983297|10983297|10983297 2R - 10983196 10983232 3'utr luna FlyBase G21937.1 ATCCAGCGGAAACTGTGTGCCATCAAGGAACGATGAA 12 10983217 0.912142406 2 11 37 0.916666667 1.041392685 0.166666667 0 0 12 1 0 11 2R:10983196-10983232 7 luna FBtr0333066|FBtr0088210|FBtr0345675 10977954|10982792|10982792 10983297|10983297|10983297 TGTGCCA 7mer-A1 dme-miR-305-3p 2R - 10983187 10983232 3'utr luna FlyBase G16636.1 ATCCAGCGGAAACTGTGTGCCATCAAGGAACGATGAAAAACTTGCG 8 10983217 0.882338161 4 7 19 0.9 0.954242509 0.5 0.125 0.3 8 1 0 9 2R:10983187-10983232 7 7.5 844 FBgn0040765 1623.386667 50.45666667 77.46666667 0.004619971 0.148642399 0.096815835 0 0 0 0.15 dme-miR-92b-3p 6mer3-8 GTGCAA 2R 11147832 11147837 - 2R_11147832_11147837_- 0.809884328 0.966067999 0.887976164 0.110438553 CG12391 FBtr0088205 11147600 11147924 2R - 11147816 11147867 5'utr CG12391 FlyBase G21940.1 TTAAGTTTCTCTAGCTGTAGGAAGAATTCAGTGCAAATAAATCACATTTGTA 81 11147840 0.822628134 5 80 498 0.988888889 1.949390007 0.144444444 0.098765432 0.188888889 81 1 0 89 2R:11147816-11147867 6 CG12391 FBtr0088205 11147600 11147924 GTGCAA 6mer3-8 dme-miR-92b-3p 2R - 11147808 11147864 5'utr CG12391 FlyBase G16638.1 AGTTTCTCTAGCTGTAGGAAGAATTCAGTGCAAATAAATCACATTTGTAATAAATAC 32 11147840 0.967108588 5 32 174 1 1.672097858 0.170212766 0.34375 0.553191489 32 0 0 47 2R:11147808-11147864 6 55 845 FBgn0033581 833.3333333 42.62666667 65.30333333 0.066 1.29027213 0.84222347 3 3 3 0.15 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 1120763 1120769 + 2R_1120763_1120769_+ 0.823077633 0.823093113 0.823085373 1.10E-05 rl FBtr0329920|FBtr0113700|FBtr0113702|FBtr0329919|FBtr0113703 1120749|1120749|1120749|1120749|1120749 1125927|1121107|1121107|1121771|1121107 2R + 1120739 1120786 stop_codon rl FlyBase G12499.1 AATGCGCCTTAAGAATGCGCTGTAAGCTTTAAGAATTTGAGTATATAG 13 1120761 0.984171241 3 10 85 0.888888889 1.204119983 0.222222222 0.230769231 0.444444444 13 2 0 16 2R:1120739-1120786 7 rl FBtr0113702|FBtr0329919|FBtr0329920|FBtr0113700|FBtr0113703 1120749|1120749|1120749|1120749|1120749 1121107|1121771|1125927|1121107|1121107 AGCTTTA 7mer-A1 dme-miR-79-3p 2R + 1120749 1120773 stop_codon rl FlyBase G9573.1 AAGAATGCGCTGTAAGCTTTAAGAA 6 1120761 0.714694217 2 6 30 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2R:1120749-1120773 7 9 846 FBgn0003256 2023.603333 112.5466667 172.76 0.004447512 0.079966829 0.052095392 2 2 2 0.15 dme-miR-11-3p 7mer-m1 TGTGATG 2R 1120957 1120963 + 2R_1120957_1120963_+ 0.611779813 0.6119074 0.611843606 9.02E-05 rl FBtr0329920|FBtr0113700|FBtr0113702|FBtr0329919|FBtr0113703 1120749|1120749|1120749|1120749|1120749 1125927|1121107|1121107|1121771|1121107 2R + 1120938 1120971 3'utr rl FlyBase G12500.1 GATAGGAACTTAAACTATGTGTGATGTTCGTAAA 8 1120955 0.741348628 2 7 67 0.888888889 0.903089987 0.111111111 0.125 0.222222222 8 1 0 8 2R:1120938-1120971 7 rl FBtr0113702|FBtr0329919|FBtr0329920|FBtr0113700|FBtr0113703 1120749|1120749|1120749|1120749|1120749 1121107|1121771|1125927|1121107|1121107 TGTGATG 7mer-m1 dme-miR-11-3p 2R + 1120936 1120968 3'utr rl FlyBase G9575.1 AAGATAGGAACTTAAACTATGTGTGATGTTCGT 6 1120955 0.936099245 2 6 48 1 1.041392685 0.363636364 0.5 0.727272727 6 0 0 11 2R:1120936-1120968 7 7 847 FBgn0003256 2023.603333 112.5466667 172.76 0.003459176 0.062196422 0.040518639 2 2 2 0.15 dme-miR-278-3p 6mer3-8 CCCACC 2R 11216414 11216419 + 2R_11216414_11216419_+ 0.678952162 0.848690891 0.763821527 0.120023386 shn FBtr0330620|FBtr0330619|FBtr0088100|FBtr0088099|FBtr0088098|FBtr0088101 11216243|11216213|11216213|11216213|11216213|11216213 11217394|11217394|11217394|11217394|11217394|11217394 2R + 11216383 11216439 3'utr shn FlyBase G14851.1 ACACAACTTACTCTAGAGCTAGCCTATAAGACCCACCTCTCTTCGATGATGGGCCCA 11 11216409 0.91327091 4 10 54 0.916666667 0.740362689 0.083333333 0.090909091 0.166666667 11 0 1 11 2R:11216383-11216439 6 shn FBtr0088098|FBtr0088101|FBtr0088100|FBtr0088099|FBtr0330620|FBtr0330619 11216213|11216213|11216213|11216213|11216243|11216213 11217394|11217394|11217394|11217394|11217394|11217394 CCCACC 6mer3-8 dme-miR-278-3p 2R + 11216379 11216441 3'utr shn FlyBase G11297.1 ACACACACAACTTACTCTAGAGCTAGCCTATAAGACCCACCTCTCTTCGATGATGGGCCCAAC 6 11216391 0.970735399 5 6 32 1 1.146128036 0 0.833333333 0.928571429 6 0 0 14 2R:11216379-11216441 6 5.5 848 FBgn0003396 1305.2 16.31666667 25.01 0.004213914 0.337078652 0.219912035 5 23 14 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 11216752 11216757 + 2R_11216752_11216757_+ 0.710468497 0.715631289 0.713049893 0.003650651 shn FBtr0330620|FBtr0330620|FBtr0330620|FBtr0330619|FBtr0330619|FBtr0330619|FBtr0088100|FBtr0088100|FBtr0088100|FBtr0088099|FBtr0088099|FBtr0088099|FBtr0088098|FBtr0088098|FBtr0088098|FBtr0088101|FBtr0088101|FBtr0088101 11216243|11216243|11216243|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213 11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394 2R + 11216657 11216779 3'utr shn FlyBase G14854.2 GCCAACCAACGAGCACACTTATAAATCTATCTATATTGTATACACTTAACCATAATTTGTTTTCGAAATGCATAAATGCAAAAACTCCTGAAGTGCTGTGAGTCTATCTACAAATGTAAAGAT 118 11216750 0.783147818 17 101 729 0.874074074 1.469822016 0.125925926 0.13559322 0.244444444 118 14 3 118 2R:11216657-11216779 6 shn FBtr0088098|FBtr0088098|FBtr0088098|FBtr0088101|FBtr0088101|FBtr0088101|FBtr0088100|FBtr0088100|FBtr0088100|FBtr0088099|FBtr0088099|FBtr0088099|FBtr0330620|FBtr0330620|FBtr0330620|FBtr0330619|FBtr0330619|FBtr0330619 11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216243|11216243|11216243|11216213|11216213|11216213 11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 11216665 11216846 3'utr shn FlyBase G11299.2 ACGAGCACACTTATAAATCTATCTATATTGTATACACTTAACCATAATTTGTTTTCGAAATGCATAAATGCAAAAACTCCTGAAGTGCTGTGAGTCTATCTACAAATGTAAAGATCCGAGAGCGAGAGAAGTGTGTTATTTTTAAGGCCTAGCCCCGAAAATGAACCTCCAAACCGAACCAG 98 11216748 0.97152353 23 90 618 0.921052632 1.447158031 0.125 0.387755102 0.605263158 98 8 4 140 2R:11216665-11216846 6 72.5 849 FBgn0003396 1305.2 16.31666667 25.01 0.055547043 4.443309499 2.898840464 2 4 3 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 2R 11217197 11217203 + 2R_11217197_11217203_+ 0.77638984 0.777005252 0.776697546 0.000435224 shn FBtr0330620|FBtr0330619|FBtr0088100|FBtr0088099|FBtr0088098|FBtr0088101 11216243|11216213|11216213|11216213|11216213|11216213 11217394|11217394|11217394|11217394|11217394|11217394 2R + 11217054 11217259 3'utr shn FlyBase G14858.1 TTTTAATTTTGTATTTGACAGAAGAGAAACGAAATGATGAAAAAAAACGCTAACTGTAAATAATCAATATGTTGTCATATATGCATTAAGCGGTAGGTTAGATAAACAAACTACACAAAGTTGATAGATATAAATGAAATATTGTACAAACTGCTATGGCAAGCGCTGCAGCAAAATCTATATATACACATAGATATATATCTATA 581 11217195 0.993823186 28 548 3732 0.944211994 1.985490629 0.337517434 0.179001721 0.334728033 581 34 6 677 2R:11217054-11217259 7 shn FBtr0088098|FBtr0088101|FBtr0088100|FBtr0088099|FBtr0330620|FBtr0330619 11216213|11216213|11216213|11216213|11216243|11216213 11217394|11217394|11217394|11217394|11217394|11217394 GTACAAA 7mer-A1 dme-miR-305-5p 2R + 11217161 11217227 3'utr shn FlyBase G11304.2 AAACTACACAAAGTTGATAGATATAAATGAAATATTGTACAAACTGCTATGGCAAGCGCTGCAGCAA 353 11217195 0.714874836 12 345 2208 0.984703633 2.012837225 0.363288719 0.35694051 0.565965583 353 4 4 515 2R:11217161-11217227 7 432 850 FBgn0003396 1305.2 16.31666667 25.01 0.330983757 26.47599591 17.27309076 2 2 2 0.15 dme-bantam-3p 6mer3-8 TGATCT 2R 11217302 11217307 + 2R_11217302_11217307_+ 0.999999988 0.999999431 0.99999971 4.24E-07 shn FBtr0330620|FBtr0330619|FBtr0088100|FBtr0088099|FBtr0088098|FBtr0088101 11216243|11216213|11216213|11216213|11216213|11216213 11217394|11217394|11217394|11217394|11217394|11217394 2R + 11217279 11217329 3'utr shn FlyBase G14859.1 GGTTAAACAACAAGAAAATGAAGTGATCTATTACATTATTGTAAAATATAT 123 11217307 0.973741087 8 122 748 0.987096774 2.184691431 0.006451613 0.203252033 0.367741935 123 2 0 153 2R:11217279-11217329 6 shn FBtr0088098|FBtr0088101|FBtr0088100|FBtr0088099|FBtr0330620|FBtr0330619 11216213|11216213|11216213|11216213|11216243|11216213 11217394|11217394|11217394|11217394|11217394|11217394 TGATCT 6mer3-8 dme-bantam-3p 2R + 11217277 11217332 3'utr shn FlyBase G11305.1 GTGGTTAAACAACAAGAAAATGAAGTGATCTATTACATTATTGTAAAATATATCAA 99 11217297 0.978344205 10 94 629 0.96350365 1.643452676 0.04379562 0.313131313 0.503649635 99 3 2 132 2R:11217277-11217332 6 110.5 851 FBgn0003396 1305.2 16.31666667 25.01 0.084661355 6.772216547 4.418232707 -5 5 0 0.15 dme-miR-1008-3p 7mer-m8 AGCTGTG 2R 11226371 11226377 + 2R_11226371_11226377_+ 0.662829259 0.670297654 0.666563456 0.005280956 CG7737 FBtr0339479|FBtr0088105 11226115|11226115 11226746|11226746 2R + 11226344 11226392 3'utr CG7737 FlyBase G14869.1 TATGTCAACAAGTGCGCTGCCCAATAAAGCTGTGTTTAAGTCTTCTCTA 12 11226368 0.93717209 3 12 59 1 1.113943352 0.230769231 0.083333333 0.153846154 12 0 0 13 2R:11226344-11226392 7 CG7737 FBtr0339479|FBtr0088105 11226115|11226115 11226746|11226746 AGCTGTG 7mer-m8 dme-miR-1008-3p 2R + 11226338 11226390 3'utr CG7737 FlyBase G11312.1 TGTCAATATGTCAACAAGTGCGCTGCCCAATAAAGCTGTGTTTAAGTCTTCTC 13 11226368 0.779713142 5 11 63 0.954545455 1.322219295 0.227272727 0.538461538 0.727272727 13 1 0 21 2R:11226338-11226390 7 8 852 FBgn0033584 242.6633333 12.57333333 19.08 0.032967486 0.636267232 0.419287212 3 3 3 0.15 dme-miR-965-3p 6mer2-7 ACGCTT 2R 11226442 11226447 + 2R_11226442_11226447_+ 0.583370953 0.61110674 0.597238847 0.019612102 CG7737 FBtr0339479|FBtr0088105 11226115|11226115 11226746|11226746 2R + 11226429 11226467 3'utr CG7737 FlyBase G14870.1 AAGCTAATGAAAAACGCTTCCCTCTCAATCGCATTTAAA 25 11226446 0.847368907 2 25 126 1 1.505149978 0.15625 0.2 0.375 25 0 0 32 2R:11226429-11226467 6 CG7737 FBtr0339479|FBtr0088105 11226115|11226115 11226746|11226746 ACGCTT 6mer2-7 dme-miR-965-3p 2R + 11226429 11226460 3'utr CG7737 FlyBase G11313.1 AAGCTAATGAAAAACGCTTCCCTCTCAATCGC 15 11226446 0.83524243 2 15 72 1 1.255272505 0.055555556 0.2 0.333333333 15 0 0 18 2R:11226429-11226460 6 20 853 FBgn0033584 242.6633333 12.57333333 19.08 0.082418715 1.590668081 1.048218029 -4 -4 -4 0.15 dme-miR-252-5p 6mer3-8 GTACTT 2R 11226663 11226668 + 2R_11226663_11226668_+ 0.628931065 0.757713888 0.693322477 0.091063191 CG7737 FBtr0339479|FBtr0088105 11226115|11226115 11226746|11226746 2R + 11226601 11226690 3'utr CG7737 FlyBase G14871.1 GAGTGTATATACAACTGAGATACAATACGATTAGCTTTAGGTTTTACGGGGGGATTAACTCTGTACTTTGATTTCAACAACGTGTAATAC 24 11226668 0.984325135 6 24 191 1 1.477121255 0.066666667 0.25 0.4 24 0 0 30 2R:11226601-11226690 6 CG7737 FBtr0339479|FBtr0088105 11226115|11226115 11226746|11226746 GTACTT 6mer3-8 dme-miR-252-5p 2R + 11226655 11226684 3'utr CG7737 FlyBase G11315.1 TTAACTCTGTACTTTGATTTCAACAACGTG 14 11226668 0.688101187 3 14 113 1 1.204119983 0.125 0.142857143 0.25 14 0 0 16 2R:11226655-11226684 6 15 854 FBgn0033584 242.6633333 12.57333333 19.08 0.061814036 1.19300106 0.786163522 -5 -5 -5 0.15 dme-miR-11-3p 7mer-m1 TGTGATG 2R 1125300 1125306 + 2R_1125300_1125306_+ 0.611785849 0.612067054 0.611926451 0.000198909 rl FBtr0329920|FBtr0345337 1120749|1125087 1125927|1125927 2R + 1125279 1125323 3'utr rl FlyBase G12503.1 AAGATAGGAACTTAAACTATGTGTGATGTTCGTAAAATGCAAAAC 12 1125298 0.689931011 3 12 94 1 1.146128036 0.357142857 0.166666667 0.285714286 12 0 0 14 2R:1125279-1125323 7 rl FBtr0329920|FBtr0345337 1120749|1125087 1125927|1125927 TGTGATG 7mer-m1 dme-miR-11-3p 2R + 1125279 1125322 3'utr rl FlyBase G9578.1 AAGATAGGAACTTAAACTATGTGTGATGTTCGTAAAATGCAAAA 9 1125298 0.90930168 4 9 78 1 1.146128036 0.357142857 0.444444444 0.642857143 9 0 0 14 2R:1125279-1125322 7 10.5 855 FBgn0003256 2023.603333 112.5466667 172.76 0.005188764 0.093294633 0.060777958 2 2 2 0.15 dme-miR-33-5p 8mer-A1 CAATGCAA 2R 11280594 11280601 - 2R_11280594_11280601_- 0.624611455 0.605553412 0.615082434 0.013476112 CG9062 FBtr0088181|FBtr0332422 11280482|11280482 11281265|11281106 2R - 11280579 11280650 3'utr CG9062 FlyBase G21953.1 ACATAGAACATACATAGGTATAAGAAATCTGTTAAATATACAGAAAAATCAATGCAATGGTAGTAGCCCAAC 60 11280602 0.944405863 4 58 255 0.985507246 1.832508913 0.057971014 0.133333333 0.246376812 60 1 0 68 2R:11280579-11280650 8 CG9062 FBtr0088181|FBtr0332422 11280482|11280482 11281265|11281106 CAATGCAA 8mer-A1 dme-miR-33-5p 2R - 11280552 11280626 3'utr CG9062 FlyBase G16646.1 AAATCTGTTAAATATACAGAAAAATCAATGCAATGGTAGTAGCCCAACTTGTAAAGAGCTCTATGCAAGCCAATT 50 11280602 0.945504715 6 48 201 0.95890411 1.84509804 0.054794521 0.32 0.534246575 50 3 0 70 2R:11280552-11280626 8 52 856 FBgn0033607 376.12 15.09333333 23.24 0.138253749 3.445229682 2.237521515 1 1 1 0.15 dme-miR-252-5p 6mer3-8 GTACTT 2R 11280832 11280837 - 2R_11280832_11280837_- 0.999999992 0.999999988 0.99999999 0 CG9062 FBtr0088181|FBtr0332422 11280482|11280482 11281265|11281106 2R - 11280690 11280854 3'utr CG9062 FlyBase G21954.1 TCGTTAGGAATAAATATGTACTTCAGATTCAGACTTATAACAATTAGGCTTGCGACACACGTAGATAAGCATTGCAAAGGAGTAACTGCAGACATACCATTAAATCGTATTTGCATCTGAAGCAACTAGACCTAGAGTATTGCGCATATATGTATGTATGTAATA 26 11280838 0.976936123 13 24 165 0.96875 1.190331698 0.1875 0.153846154 0.3125 26 0 1 31 2R:11280690-11280854 6 CG9062 FBtr0088181|FBtr0332422 11280482|11280482 11281265|11281106 GTACTT 6mer3-8 dme-miR-252-5p 2R - 11280798 11280873 3'utr CG9062 FlyBase G16647.1 ACTTTTGTTTGTTCACTTCTCGTTAGGAATAAATATGTACTTCAGATTCAGACTTATAACAATTAGGCTTGCGACA 12 11280827 0.799257652 8 11 92 0.941176471 0.903089987 0.058823529 0.333333333 0.529411765 12 0 1 16 2R:11280798-11280873 6 8.5 857 FBgn0033607 376.12 15.09333333 23.24 0.02259917 0.563162544 0.365748709 1 -10 -4.5 0.15 dme-bantam-3p 7mer-m8 TGATCTC 2R 11281089 11281095 - 2R_11281089_11281095_- 0.638549959 0.660049348 0.649299653 0.015202301 CG9062 FBtr0088181|FBtr0332422 11280482|11280482 11281265|11281106 2R - 11281034 11281118 stop_codon CG9062 FlyBase G21955.1 CGCAAGTATTGAACGCTGGCAAGTGATCTCCCGCCTAACCGAAGCAGTACCGATGCATTATTGAATGAGAACGAGATTGAGCAGA 71 11281095 0.852989109 7 68 310 0.963414634 1.420505837 0.109756098 0.154929577 0.268292683 71 1 2 79 2R:11281034-11281118 7 CG9062 FBtr0088181|FBtr0332422 11280482|11280482 11281265|11281106 TGATCTC 7mer-m8 dme-bantam-3p 2R - 11281030 11281111 stop_codon CG9062 FlyBase G16648.1 ATTGAACGCTGGCAAGTGATCTCCCGCCTAACCGAAGCAGTACCGATGCATTATTGAATGAGAACGAGATTGAGCAGATCGA 27 11281095 0.793797336 7 27 107 1 1.602059991 0.125 0.407407407 0.6 27 0 0 40 2R:11281030-11281111 7 38.5 858 FBgn0033607 376.12 15.09333333 23.24 0.102360949 2.550795053 1.656626506 0 0 0 0.15 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 11285664 11285669 - 2R_11285664_11285669_- 0.862960385 0.860514991 0.861737688 0.001729159 Fbl6 FBtr0088179|FBtr0088180|FBtr0088178 11285146|11285146|11285146 11285963|11285963|11285963 2R - 11285532 11285762 3'utr Fbl6 FlyBase G21963.2 AGGCCCTAGAGCGTAACTACTGTACTAGCATAGTATTCTCTGCACAGCGGCAGCAGCGAGTTCCTCCCTTTTCTGGAGGTGCCCGCATTAGATGCTGTGCGAATAAGCAACCTTTTGTAAATGCAATATGTATTCATAACTAAGTTGATTCGAATTTTTTGCAGCGCGAAAATCATTTCCTTTTGAAGACAACCGTTGCAACGATTTTCAATGATTTTTTTTAGTATATAT 505 11285670 0.948965696 30 500 3238 0.989726027 2.761927838 0.023972603 0.138613861 0.255136986 505 6 0 578 2R:11285532-11285762 6 Fbl6 FBtr0088179|FBtr0088180|FBtr0088178 11285146|11285146|11285146 11285963|11285963|11285963 GCTGTG 6mer2-7 dme-miR-1008-3p 2R - 11285632 11285803 3'utr Fbl6 FlyBase G16655.1 TGCAATCGCTTGCATCTTCCAATAATGCTTATTTTGTTTATAGGCCCTAGAGCGTAACTACTGTACTAGCATAGTATTCTCTGCACAGCGGCAGCAGCGAGTTCCTCCCTTTTCTGGAGGTGCCCGCATTAGATGCTGTGCGAATAAGCAACCTTTTGTAAATGCAATATGT 309 11285670 0.923095296 15 300 1997 0.979123173 2.194051588 0.022964509 0.414239482 0.622129436 309 8 2 469 2R:11285632-11285803 6 320.5 859 FBgn0033609 266.6666667 9.223333333 14.21 1.201875 34.74882544 22.55453906 1 1 1 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2R 11309690 11309696 + 2R_11309690_11309696_+ 0.699651151 0.643261389 0.67145627 0.03987361 CG7745 FBtr0088119 11309524 11309829 2R + 11309671 11309717 3'utr CG7745 FlyBase G14891.1 CGAACACTTTTCAAATGTGCTAGTCAAGACCAGCAATTGGGATTCCA 18 11309687 0.971601645 3 18 108 1 1.322219295 0.238095238 0.166666667 0.285714286 18 0 0 21 2R:11309671-11309717 7 CG7745 FBtr0088119 11309524 11309829 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R + 11309644 11309704 3'utr CG7745 FlyBase G11325.1 AGTCATTTGCAAAGCTCTACGTTCTACCGAACACTTTTCAAATGTGCTAGTCAAGACCAGC 10 11309687 0.9763679 4 10 66 1 1.146128036 0.214285714 0.3 0.5 10 0 0 14 2R:11309644-11309704 7 13.5 860 FBgn0033616 171.0033333 10.95666667 16.76333333 0.07894583 1.232126559 0.805329091 3 3 3 0.15 dme-miR-282-5p 6mer3-8 AGAGGC 2R 11462912 11462917 + 2R_11462912_11462917_+ 0.853380504 0.548134039 0.700757271 0.21584187 E(Pc) FBtr0330622|FBtr0330621|FBtr0088140|FBtr0088139|FBtr0330623 11461842|11461812|11461812|11461812|11461842 11464030|11465270|11464030|11464030|11465270 2R + 11462898 11462933 3'utr E(Pc) FlyBase G14939.1 AGGAATGGAACTTCAGAGGCAACTGATCTGAGAGAG 5 11462923 0.866889009 3 5 16 1 0.77815125 0.833333333 0.2 0.333333333 5 0 0 6 2R:11462898-11462933 6 E(Pc) FBtr0330623|FBtr0088139|FBtr0088140|FBtr0330621|FBtr0330622 11461842|11461812|11461812|11461812|11461842 11465270|11464030|11464030|11465270|11464030 AGAGGC 6mer3-8 dme-miR-282-5p 2R + 11462890 11462965 3'utr E(Pc) FlyBase G11353.1 TTTAACTAAGGAATGGAACTTCAGAGGCAACTGATCTGAGAGAGATGTAGGGAGTTGCAGAAGAAAACTACTATTG 15 11462924 0.973128488 7 10 64 0.833333333 1 0.291666667 0.466666667 0.666666667 15 3 1 20 2R:11462890-11462965 6 7 861 FBgn0000581 1705.15 21.49666667 32.99 0.004105211 0.325631881 0.212185511 -11 -12 -11.5 0.15 dme-miR-252-5p 7mer-m8 GTACTTA 2R 11579041 11579047 - 2R_11579041_11579047_- 0.588254113 0.588267077 0.588260595 9.19E-06 tou FBtr0333070|FBtr0113066|FBtr0088091|FBtr0333071 11577483|11578878|11578878|11578878 11579826|11579826|11579826|11579826 2R - 11578989 11579093 3'utr tou FlyBase G22043.1 TTTTAAGCACCAACGAAGCGCTCATTTAAGTTTTAAAGTGTATTTTGTACTTATAGCAACTCCGAAATCTGTATTTAAACGTATTATAACAAGTGCTAACAGTTG 46 11579048 0.98838123 10 42 389 0.918032787 1.447158031 0.131147541 0.260869565 0.442622951 46 4 1 56 2R:11578989-11579093 7 tou FBtr0333071|FBtr0113066|FBtr0088091|FBtr0333070 11578878|11578878|11578878|11577483 11579826|11579826|11579826|11579826 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 11578901 11579281 3'utr tou FlyBase G16721.1 AAGAAGCCATCTACAGTAGACGCCCGGACTGGATGAACGCTGACAAATGACAAATGAACACGTACAAAAACTGTCTACCAATTTCCGATCCGATCGATCGATCCATCGTTTGAACAGTATTTTGTGCACAAAGCCGCGTCGCTTTATTTTCTACACTTACAATTCGAACCCTAATTTTAACAACTATTTTTTAAGCACCAACGAAGCGCTCATTTAAGTTTTAAAGTGTATTTTGTACTTATAGCAACTCCGAAATCTGTATTTAAACGTATTATAACAAGTGCTAACAGTTGCCCAGGCAAAAATGCGAACAATTATACTCAAAAAGGCGGTGCGAGGAGGACTTGTAAATGTAAATGAAAGCAAATTAAAATTAAATGT 124 11579048 0.977775772 39 120 793 0.971590909 2.23299611 0.181818182 0.298387097 0.505681818 124 5 0 171 2R:11578901-11579281 7 24 862 FBgn0033636 2664.063333 30.46 46.92333333 0.009008795 0.787918582 0.511472615 1 1 1 0.15 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 2R 11619646 11619652 - 2R_11619646_11619652_- 0.822190864 0.822313085 0.822251974 8.64E-05 CG9005 FBtr0300945 11619477 11620844 2R - 11619612 11619665 3'utr CG9005 FlyBase G22107.1 ATTTTCCAATTGATACCTGACTATAACTATTGTATAACAACGTACTACACAGCT 12 11619656 0.989233326 7 10 97 0.857142857 1.079181246 0.071428571 0.166666667 0.285714286 12 2 0 12 2R:11619612-11619665 7 CG9005 FBtr0300945 11619477 11620844 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2R - 11619614 11619665 3'utr CG9005 FlyBase G16756.1 ATTTTCCAATTGATACCTGACTATAACTATTGTATAACAACGTACTACACAG 7 11619655 0.99192614 5 5 46 0.714285714 0.698970004 0.142857143 0 0 7 2 0 5 2R:11619614-11619665 7 7.5 863 FBgn0033638 313.34 6.546666667 10.11333333 0.023935661 1.145621181 0.741595254 4 3 3.5 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 2R 11642877 11642883 - 2R_11642877_11642883_- 0.521178289 0.521202707 0.521190498 1.73E-05 CG9003 FBtr0330632|FBtr0330634|FBtr0113069|FBtr0113068|FBtr0330633|FBtr0088088|FBtr0113067 11642266|11641475|11642266|11642266|11642266|11642266|11641475 11643134|11643188|11643188|11643188|11643134|11643188|11643188 2R - 11642747 11642910 3'utr CG9003 FlyBase G22136.1 AAAAACTCGCAGAAACCAGCATCAAATTGTGATTATTTTATTTACTATGCTACGTTATCTAGACCCTCACTTGTGTAAACTGTATTAGCGCCCACACTCTGTTTGTTATTAACTGCAGCCCGATGAATTGCTAGCTTATATAGATCTGTATATATACATATATG 302 11642884 0.862518302 25 293 2501 0.962962963 1.812913357 0.054320988 0.268211921 0.454320988 302 10 5 390 2R:11642747-11642910 7 CG9003 FBtr0088088|FBtr0113067|FBtr0113068|FBtr0330633|FBtr0113069|FBtr0330632|FBtr0330634 11642266|11641475|11642266|11642266|11642266|11642266|11641475 11643188|11643188|11643188|11643134|11643188|11643134|11643188 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 11642864 11642911 3'utr CG9003 FlyBase G16782.1 CAAAAACTCGCAGAAACCAGCATCAAATTGTGATTATTTTATTTACTA 173 11642884 0.987401994 10 162 1437 0.9437751 1.525969822 0.048192771 0.312138728 0.522088353 173 8 6 235 2R:11642864-11642911 7 220 864 FBgn0033639 532.1833333 18.93 29.13 0.413391375 11.6217644 7.552351528 1 1 1 0.15 dme-bantam-3p 6mer3-8 TGATCT 2R 11643071 11643076 - 2R_11643071_11643076_- 0.824106272 0.666364266 0.745235269 0.111540438 CG9003 FBtr0330632|FBtr0330634|FBtr0113069|FBtr0113068|FBtr0330633|FBtr0088088|FBtr0113067 11642266|11641475|11642266|11642266|11642266|11642266|11641475 11643134|11643188|11643188|11643188|11643134|11643188|11643188 2R - 11643008 11643112 3'utr CG9003 FlyBase G22137.1 TGTTCGCCATGGTGTTCAGCCTGACCCTCGTCTCGATGATCTGCATGTACTTGCTGGGCCTGCTCGACGCGGCGATGACCACATGGCCACCAGATTCAAATTAAG 23 11643076 0.977523132 9 23 148 1 1.447158031 0.107142857 0.173913043 0.321428571 23 0 0 28 2R:11643008-11643112 6 CG9003 FBtr0088088|FBtr0113067|FBtr0113068|FBtr0330633|FBtr0113069|FBtr0330632|FBtr0330634 11642266|11641475|11642266|11642266|11642266|11642266|11641475 11643188|11643188|11643188|11643134|11643188|11643134|11643188 TGATCT 6mer3-8 dme-bantam-3p 2R - 11643048 11643111 3'utr CG9003 FlyBase G16783.1 GTTCGCCATGGTGTTCAGCCTGACCCTCGTCTCGATGATCTGCATGTACTTGCTGGGCCTGCTC 9 11643076 0.978087945 5 9 63 1 1.176091259 0.2 0.444444444 0.666666667 9 0 0 15 2R:11643048-11643111 6 7.5 865 FBgn0033639 532.1833333 18.93 29.13 0.014092888 0.396196513 0.257466529 0 0 0 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 2R 11688610 11688616 - 2R_11688610_11688616_- 0.781976171 0.782398818 0.782187494 0.000298823 wal FBtr0088083 11688567 11689078 2R - 11688604 11688636 3'utr wal FlyBase G22155.1 TGTGAAAATGTGAAAACTGTGTACAAAAAAAGA 7 11688619 0.877184095 5 7 27 1 1 0.7 0.285714286 0.5 7 0 0 10 2R:11688604-11688636 7 wal FBtr0088083 11688567 11689078 GTACAAA 7mer-A1 dme-miR-305-5p 2R - 11688591 11688638 3'utr wal FlyBase G16798.1 AGTGTGAAAATGTGAAAACTGTGTACAAAAAAAGATTATAGATCAAAT 8 11688619 0.912093297 3 8 31 1 1.079181246 0.583333333 0.375 0.583333333 8 0 0 12 2R:11688591-11688638 7 6.5 866 FBgn0010516 627.3333333 62.66 95.9 0.010361318 0.10373444 0.067778936 3 3 3 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 11689014 11689021 - 2R_11689014_11689021_- 0.624798908 0.625037857 0.624918382 0.000168999 wal FBtr0088083 11688567 11689078 2R - 11688990 11689087 stop_codon wal FlyBase G22158.1 AAGTTGTAAGGCGAGATTGTCACTTGCTGTAGTATAAAGATTGTGTACCGATGAATTGATAACTGTTGCATTTATTTGAATTTTGACATAAGTCCGTG 349 11689022 0.989842041 22 338 3491 0.966292135 1.934498451 0.359550562 0.212034384 0.382022472 349 11 4 430 2R:11688990-11689087 8 wal FBtr0088083|FBtr0088082 11688567|11688934 11689078|11689078 TGCATTTA 8mer-A1 dme-miR-277-3p 2R - 11688971 11689087 stop_codon wal FlyBase G16801.1 AAGTTGTAAGGCGAGATTGTCACTTGCTGTAGTATAAAGATTGTGTACCGATGAATTGATAACTGTTGCATTTATTTGAATTTTGACATAAGTCCGTGGAAGATTTTCCCTTAAATT 254 11689022 0.991362397 22 243 2604 0.960106383 1.858537198 0.29787234 0.374015748 0.57712766 254 11 4 361 2R:11688971-11689087 8 275 867 FBgn0010516 627.3333333 62.66 95.9 0.438363443 4.388764762 2.867570386 1 1 1 0.15 dme-miR-980-3p 7mer-A1 GCAGCTA 2R 11826991 11826997 + 2R_11826991_11826997_+ 0.733990985 0.721163695 0.72757734 0.009070271 CG13192 FBtr0088031 11826796 11827097 2R + 11826972 11827037 3'utr CG13192 FlyBase G14964.1 AATTAAAGGGCTTGGCAATGCAGCTATTTGTTACTTAGATGAACTTTGACCACCCTTGAAAAAGAA 32 11826990 0.835183514 10 28 216 0.888888889 1.204119983 0.25 0.09375 0.194444444 32 3 1 32 2R:11826972-11827037 7 CG13192 FBtr0088031 11826796 11827097 GCAGCTA 7mer-A1 dme-miR-980-3p 2R + 11826976 11827029 3'utr CG13192 FlyBase G11369.1 AAAGGGCTTGGCAATGCAGCTATTTGTTACTTAGATGAACTTTGACCACCCTTG 16 11826990 0.835828957 7 15 104 0.884615385 0.759667845 0.461538462 0.5 0.692307692 16 0 3 23 2R:11826976-11827029 7 18 868 FBgn0033653 156.6666667 14.10333333 21.37666667 0.114893617 1.27629402 0.842039607 1 1 1 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 11901057 11901064 + 2R_11901057_11901064_+ 0.499525449 0.49977259 0.499649019 0.000174797 Zip48C FBtr0088038 11900986 11901394 2R + 11901028 11901122 3'utr Zip48C FlyBase G15003.1 AATCTAGTGCTAAACTCAAAGATTCCACTGTACTTAACGCAAAACTCTGCTGTCTTGTAAATAGAAGCATGCTGTGTACAAATCTCAGAACCAGC 26 11901056 0.975057564 6 22 139 0.848484848 0.84509804 0.03030303 0.230769231 0.393939394 26 2 3 28 2R:11901028-11901122 8 Zip48C FBtr0088038 11900986 11901394 GTACTTAA 8mer-A1 dme-miR-252-5p 2R + 11901031 11901083 3'utr Zip48C FlyBase G11397.1 CTAGTGCTAAACTCAAAGATTCCACTGTACTTAACGCAAAACTCTGCTGTCTT 22 11901056 0.929426898 2 22 135 1 1.477121255 0.033333333 0.272727273 0.466666667 22 0 0 30 2R:11901031-11901083 8 21 869 FBgn0033665 71.33333333 4.603333333 6.97 0.294392523 4.561911658 3.012912482 1 1 1 0.15 dme-miR-1003-3p 6mer3-8 ATGTGA 2R 11901300 11901305 + 2R_11901300_11901305_+ 0.9951026 0.995938471 0.995520535 0.000591071 Zip48C FBtr0088038 11900986 11901394 2R + 11901287 11901322 3'utr Zip48C FlyBase G15004.1 TAAACAAACGTGCATGTGAATTAGGTTTTAAGTTGT 28 11901307 0.800114717 4 26 232 0.942857143 1.51851394 0.314285714 0.214285714 0.371428571 28 2 0 33 2R:11901287-11901322 6 Zip48C FBtr0088038 11900986 11901394 ATGTGA 6mer3-8 dme-miR-1003-3p 2R + 11901284 11901321 3'utr Zip48C FlyBase G11399.1 TTGTAAACAAACGTGCATGTGAATTAGGTTTTAAGTTG 8 11901307 0.9728619 4 8 58 1 1.176091259 0.133333333 0.625 0.8 8 0 0 15 2R:11901284-11901321 6 17.5 870 FBgn0033665 71.33333333 4.603333333 6.97 0.245327103 3.801593049 2.510760402 -7 -7 -7 0.15 dme-miR-1008-3p 7mer-m8 AGCTGTG 2R 11977117 11977123 + 2R_11977117_11977123_+ 0.402678547 0.416119875 0.409399211 0.009504505 ADD1 FBtr0088042 11977075 11977721 2R + 11977056 11977167 stop_codon ADD1 FlyBase G15023.1 ACGGCTGAGATTGTTGGCTAGTTTATGGTGATCATTTGAGGTCCCGCCGAAGAAGATTGGTAGCTGTGGCCCTCAAAACGTGCCATTTAGTATTTGTACTAGAATTTAAAAC 94 11977113 0.950595072 15 91 539 0.963636364 2.025305865 0.109090909 0.138297872 0.263636364 94 4 0 106 2R:11977056-11977167 7 ADD1 FBtr0088042 11977075 11977721 AGCTGTG 7mer-m8 dme-miR-1008-3p 2R + 11977032 11977167 stop_codon ADD1 FlyBase G11413.1 GACTCTGCGCCAGACGAGTTCGCCACGGCTGAGATTGTTGGCTAGTTTATGGTGATCATTTGAGGTCCCGCCGAAGAAGATTGGTAGCTGTGGCCCTCAAAACGTGCCATTTAGTATTTGTACTAGAATTTAAAAC 83 11977113 0.970090565 14 82 464 0.98245614 2.049218023 0.052631579 0.289156627 0.48245614 83 2 0 112 2R:11977032-11977167 7 72.5 871 FBgn0026573 1224.666667 33.41666667 51.42333333 0.059199782 2.16957606 1.40986582 4 4 4 0.15 dme-bantam-3p 6mer3-8 TGATCT 2R 11977211 11977216 + 2R_11977211_11977216_+ 0.998985206 0.99994542 0.999465313 0.000678964 ADD1 FBtr0088042 11977075 11977721 2R + 11977191 11977234 3'utr ADD1 FlyBase G15024.1 AACATTTTATGTAAATACTTTGATCTGTTTATAGTTTAAACAAT 15 11977210 0.641064807 7 13 167 0.9375 1.176091259 0.0625 0.066666667 0.125 15 1 0 15 2R:11977191-11977234 6 ADD1 FBtr0088042 11977075 11977721 TGATCT 6mer3-8 dme-bantam-3p 2R + 11977199 11977234 3'utr ADD1 FlyBase G11414.1 ATGTAAATACTTTGATCTGTTTATAGTTTAAACAAT 17 11977210 0.712294705 6 16 184 0.931034483 1.431363764 0 0.529411765 0.724137931 17 2 0 27 2R:11977199-11977234 6 15 872 FBgn0026573 1224.666667 33.41666667 51.42333333 0.012248231 0.448877805 0.291696376 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 11977302 11977307 + 2R_11977302_11977307_+ 0.999949861 0.999958032 0.999953947 5.73E-06 ADD1 FBtr0088042|FBtr0088042|FBtr0088042 11977075|11977075|11977075 11977721|11977721|11977721 2R + 11977265 11977324 3'utr ADD1 FlyBase G15025.1 GACATTAACACCATTATATTAACTGAATCGCGTATTCCTGTGAATATAAGTCGGGCACGT 28 11977299 0.983292618 9 27 202 0.941176471 1.505149978 0.088235294 0.178571429 0.323529412 28 2 0 32 2R:11977265-11977324 6 ADD1 FBtr0088042|FBtr0088042|FBtr0088042 11977075|11977075|11977075 11977721|11977721|11977721 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 11977284 11977323 3'utr ADD1 FlyBase G11415.1 TAACTGAATCGCGTATTCCTGTGAATATAAGTCGGGCACG 25 11977299 0.699335887 7 23 184 0.95 1.579783597 0.2 0.48 0.675 25 2 0 38 2R:11977284-11977323 6 26 873 FBgn0026573 1224.666667 33.41666667 51.42333333 0.021230267 0.778054863 0.505607053 3 3 3 0.15 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2R 11991313 11991320 + 2R_11991313_11991320_+ 0.631136318 0.631136343 0.63113633 0 CG8298 FBtr0306003 11991281 11992350 2R + 11991105 11991372 stop_codon CG8298 FlyBase G15033.1 GAAATGCCTGCACTGGAACAACTACGAGACGTACGAGGCTGATATTGAGCTGTTTGCTCAGCGAGAACTTGATCCCAATTTACCTGTAAGGCGTTCCGTACCGGGCAGTATATTCCTGACCACTTCTTTTGCGATGATTATCCTGGCTAACTACTTAAAGTCCAATCCCCTGAAATAGTGGCTGATGTAGGGAAGAACGGCTGCTCTATCTAGTCAACCAAACACGTTCAAATGTGTGCATTAAAATTTATTGTTTAGTTTAGCATAT 178 11991312 0.976302187 34 169 1094 0.941176471 1.806179974 0.132352941 0.106741573 0.220588235 178 10 2 192 2R:11991105-11991372 8 CG8298 FBtr0306003 11991281 11992350 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R + 11991126 11991364 stop_codon CG8298 FlyBase G11420.1 CTACGAGACGTACGAGGCTGATATTGAGCTGTTTGCTCAGCGAGAACTTGATCCCAATTTACCTGTAAGGCGTTCCGTACCGGGCAGTATATTCCTGACCACTTCTTTTGCGATGATTATCCTGGCTAACTACTTAAAGTCCAATCCCCTGAAATAGTGGCTGATGTAGGGAAGAACGGCTGCTCTATCTAGTCAACCAAACACGTTCAAATGTGTGCATTAAAATTTATTGTTTAGTT 126 11991312 0.750569599 34 117 779 0.948598131 2.006466042 0.130841121 0.436507937 0.668224299 126 10 1 203 2R:11991126-11991364 8 48 874 FBgn0033673 177.0033333 9.53 14.54 0.271181334 5.036726128 3.301237964 1 1 1 0.15 dme-miR-14-3p 7mer-A1 AGACTGA 2R 12049766 12049772 + 2R_12049766_12049772_+ 0.823241308 0.823254943 0.823248125 9.62E-06 Drep-1 FBtr0330629|FBtr0087978 12049191|12049164 12050172|12050172 2R + 12049691 12049788 3'utr Drep-1 FlyBase G15086.1 GTAGAGTGGAAACGCACATCAAATATTGTTTTTAGACCAATGCCATTGTGAATGTCATTCGTTAAAGGCCAATTGAGACTGACTGAATTTATGTGTAA 137 12049764 0.942985892 7 134 550 0.965517241 2.225309282 0.373563218 0.233576642 0.396551724 137 6 0 168 2R:12049691-12049788 7 Drep-1 FBtr0330629|FBtr0087978 12049191|12049164 12050172|12050172 AGACTGA 7mer-A1 dme-miR-14-3p 2R + 12049743 12049790 3'utr Drep-1 FlyBase G11459.1 TGTCATTCGTTAAAGGCCAATTGAGACTGACTGAATTTATGTGTAATA 98 12049764 0.754699072 4 96 372 0.962264151 1.582631439 0.352201258 0.428571429 0.647798742 98 3 3 153 2R:12049743-12049790 7 116 875 FBgn0024732 75.66666667 4.37 6.78 1.533039648 26.54462243 17.10914454 2 2 2 0.15 dme-miR-12-5p 6mer2-7 ATACTC 2R 12146152 12146157 - 2R_12146152_12146157_- 0.999610559 0.990113326 0.994861943 0.006715605 CG8878 FBtr0088018|FBtr0088017 12146022|12146022 12146701|12146701 2R - 12146123 12146237 3'utr CG8878 FlyBase G22272.1 TAGTTTCGTTAGGCTATCAACAACCATATTATAGACCACATGTACGACTCGTTTCACCCACATTTCATGCAGCCAGGTACATACTCTCCTCAAAAAGTATTTAATATAACTAGAT 24 12146156 0.792361975 10 23 145 1 1.447158031 0.142857143 0.166666667 0.285714286 24 0 0 28 2R:12146123-12146237 6 CG8878 FBtr0088018|FBtr0088017 12146022|12146022 12146701|12146701 ATACTC 6mer2-7 dme-miR-12-5p 2R - 12146112 12146207 3'utr CG8878 FlyBase G16887.1 ATAGACCACATGTACGACTCGTTTCACCCACATTTCATGCAGCCAGGTACATACTCTCCTCAAAAAGTATTTAATATAACTAGATAATGGTTATTT 16 12146156 0.978456746 7 14 89 0.916666667 1.041392685 0.083333333 0.375 0.583333333 16 1 1 22 2R:12146112-12146207 6 9 876 FBgn0027504 1146.95 34.64 53.11333333 0.007846898 0.259815242 0.169448977 -1 -1 -1 0.15 dme-miR-8-3p 6mer2-7 AGTATT 2R 12166876 12166881 - 2R_12166876_12166881_- 1 0.924984273 0.962492136 0.05304411 Oda FBtr0088015|FBtr0088013 12166293|12166574 12167397|12167397 2R - 12166790 12166906 3'utr Oda FlyBase G22343.1 ATTTTATGTTTAAGCTTATATATGAAGTATTGTAATCCCAATTTGTTCGCACTTAAAAATATTCAATATATTTTTATTCACTTTTTGTACGCCGAAAGCGACGAGAACGGCGAGGTA 13 12166884 0.989741016 8 12 119 0.933333333 1.146128036 0.066666667 0.153846154 0.266666667 13 1 0 14 2R:12166790-12166906 6 Oda FBtr0088015|FBtr0088013 12166293|12166574 12167397|12167397 AGTATT 6mer2-7 dme-miR-8-3p 2R - 12166829 12166894 3'utr Oda FlyBase G16950.1 AGCTTATATATGAAGTATTGTAATCCCAATTTGTTCGCACTTAAAAATATTCAATATATTTTTATT 6 12166876 0.993762778 4 6 62 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2R:12166829-12166894 6 5.5 877 FBgn0014184 5981.923333 429.3966667 665.3566667 0.000919437 0.01280867 0.008266243 3 -5 -1 0.15 dme-miR-7-5p 6mer3-8 GTCTTC 2R 12167170 12167175 - 2R_12167170_12167175_- 0.999742186 0.997618346 0.998680266 0.001501824 Oda FBtr0088015|FBtr0088013|FBtr0088014 12166293|12166574|12167027 12167397|12167397|12167397 2R - 12167064 12167225 5'utr Oda FlyBase G22345.1 CTTTTTGAATCTTCGCGTTGTTTATGTAGTCGAAAATCGTTTTGAAAATTGTCTTCGGAGCGGCTTCATTTTTGGTAGACTTTCAATTATGGCCAGCCACGTTAAGAGCCTGATCGCAAATTACTATATTAAACTATATCCAACAACAACAAAAATCGAACG 37 12167176 0.979509746 17 37 271 1 1.643452676 0.045454545 0.189189189 0.318181818 37 0 0 44 2R:12167064-12167225 6 Oda FBtr0088014|FBtr0088015|FBtr0088013 12167027|12166293|12166574 12167397|12167397|12167397 GTCTTC 6mer3-8 dme-miR-7-5p 2R - 12167058 12167186 5'utr Oda FlyBase G16952.1 TTTTGAAAATTGTCTTCGGAGCGGCTTCATTTTTGGTAGACTTTCAATTATGGCCAGCCACGTTAAGAGCCTGATCGCAAATTACTATATTAAACTATATCCAACAACAACAAAAATCGAACGAAAACG 35 12167177 0.985440326 12 27 223 0.87037037 1.194976603 0.074074074 0.382352941 0.611111111 34 5 2 47 2R:12167058-12167186 6 14 878 FBgn0014184 5981.923333 429.3966667 665.3566667 0.002340384 0.032603886 0.021041346 1 2 1.5 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2R 12177463 12177469 - 2R_12177463_12177469_- 0.823321655 0.823349558 0.823335606 1.97E-05 EndoG FBtr0088012 12177428 12177540 2R - 12177449 12177483 3'utr EndoG FlyBase G22363.1 AATTTTCTTCTTTTCCAAAGAACTTGTGGATTAAT 6 12177471 0.892011484 2 6 69 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2R:12177449-12177483 7 EndoG FBtr0088012 12177428 12177540 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 12177449 12177482 3'utr EndoG FlyBase G16968.1 ATTTTCTTCTTTTCCAAAGAACTTGTGGATTAAT 5 12177472 0.747228632 2 5 60 1 0.698970004 0 0 0 5 0 0 5 2R:12177449-12177482 7 5.5 879 FBgn0033690 109.39 12.2 18.82333333 0.050278819 0.450819672 0.292190544 2 3 2.5 0.15 dme-miR-79-3p 8mer-A1 TAGCTTTA 2R 12182209 12182216 + 2R_12182209_12182216_+ 0.62535432 0.625363924 0.625359122 6.79E-06 wash FBtr0339595|FBtr0087989 12182199|12182199 12182373|12182373 2R + 12182165 12182254 stop_codon wash FlyBase G15122.1 GAACACTCCGAGGACGACGAGGATGGGTGGAACTAGTGAATATTTAGCTTTAGTACCGGTTTAAGTGCCTTGGCTGGCTTAAAGCACTAG 24 12182208 0.974772391 7 23 141 1 1.531478917 0.147058824 0.333333333 0.529411765 24 0 0 34 2R:12182165-12182254 8 wash FBtr0339595|FBtr0087989 12182199|12182199 12182373|12182373 TAGCTTTA 8mer-A1 dme-miR-79-3p 2R + 12182164 12182268 stop_codon wash FlyBase G11488.1 CGAACACTCCGAGGACGACGAGGATGGGTGGAACTAGTGAATATTTAGCTTTAGTACCGGTTTAAGTGCCTTGGCTGGCTTAAAGCACTAGCAACCTAGGTTCTC 16 12182208 0.985694226 10 13 114 0.923076923 1.079181246 0.038461538 0.4375 0.653846154 16 1 1 24 2R:12182164-12182268 8 10 880 FBgn0033692 122.6666667 8.66 13.35666667 0.081521739 1.154734411 0.748689793 1 1 1 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 2R 12192420 12192426 - 2R_12192420_12192426_- 0.521223855 0.521223855 0.521223855 0 CG8858 FBtr0088008 12192372 12192572 2R - 12192373 12192439 3'utr CG8858 FlyBase G22374.1 GATAATTTTCTATTGTGATTCATTGATCCAGGAGTGTAAGGAAACCTTAAATATACTATCATAAATA 14 12192418 0.991198907 6 14 148 1 1.255272505 0.277777778 0.214285714 0.388888889 14 0 0 18 2R:12192373-12192439 7 CG8858 FBtr0088008 12192372 12192572 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 12192412 12192437 3'utr CG8858 FlyBase G16978.1 TAATTTTCTATTGTGATTCATTGATC 7 12192429 0.571277289 4 5 60 0.7 0.84509804 0.1 0.428571429 0.6 7 3 0 7 2R:12192412-12192437 7 9.5 881 FBgn0033698 597.0133333 12.17333333 18.65666667 0.015912542 0.780394304 0.509201358 -8 3 -2.5 0.15 dme-miR-1008-3p 7mer-m8 AGCTGTG 2R 12273854 12273860 + 2R_12273854_12273860_+ 0.655926939 0.620185912 0.638056425 0.025272703 Cam FBtr0345018|FBtr0304963|FBtr0088001|FBtr0304964 12273793|12273793|12273793|12273793 12274625|12278809|12274625|12276621 2R + 12273819 12273921 3'utr Cam FlyBase G15131.1 CCTTTCTATTTTTTTAAGATGTTGACGAAGACTGTAGCTGTGCGCAATAACATCGCGCCACGCTGTTGCTATGGACCCCAGTAAAAGATCTTAAAAAAAAAAC 93 12273853 0.819222965 13 85 478 0.881889764 2.049218023 0.346456693 0.311827957 0.496062992 93 15 0 112 2R:12273819-12273921 7 Cam FBtr0088001|FBtr0304964|FBtr0345018|FBtr0304963 12273793|12273793|12273793|12273793 12274625|12276621|12274625|12278809 AGCTGTG 7mer-m8 dme-miR-1008-3p 2R + 12273825 12273916 3'utr Cam FlyBase G11494.1 TATTTTTTTAAGATGTTGACGAAGACTGTAGCTGTGCGCAATAACATCGCGCCACGCTGTTGCTATGGACCCCAGTAAAAGATCTTAAAAAA 63 12273853 0.900362024 12 61 328 0.958762887 1.491361694 0.237113402 0.380952381 0.597938144 63 2 2 93 2R:12273825-12273916 7 66 882 FBgn0000253 25804.84 1958.443333 3036.34 0.00255766 0.033700235 0.021736696 1 1 1 0.15 dme-miR-8-3p 7mer-m8 CAGTATT 2R 12274393 12274399 + 2R_12274393_12274399_+ 0.560523476 0.661253755 0.610888615 0.071227078 Cam FBtr0345018|FBtr0304963|FBtr0088001|FBtr0304964 12273793|12273793|12273793|12273793 12274625|12278809|12274625|12276621 2R + 12274374 12274416 3'utr Cam FlyBase G15135.1 AAGCAGCAGCAGCATCCACCAGTATTGCCGAAAGATGGCGCCC 19 12274399 0.917330081 2 18 63 0.954545455 1.322219295 0.090909091 0.157894737 0.272727273 19 1 0 21 2R:12274374-12274416 7 Cam FBtr0088001|FBtr0304964|FBtr0345018|FBtr0304963 12273793|12273793|12273793|12273793 12274625|12276621|12274625|12278809 CAGTATT 7mer-m8 dme-miR-8-3p 2R + 12274365 12274415 3'utr Cam FlyBase G11495.2 AGAAGCAAGAAGCAGCAGCAGCATCCACCAGTATTGCCGAAAGATGGCGCC 12 12274399 0.872703081 3 10 33 0.80952381 1.230448921 0.095238095 0.666666667 0.80952381 12 4 0 17 2R:12274365-12274415 7 14.5 883 FBgn0000253 25804.84 1958.443333 3036.34 0.00056191 0.007403839 0.004775486 -6 -6 -6 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 2R 12274548 12274553 + 2R_12274548_12274553_+ 0.834577966 0.855602911 0.845090438 0.014866849 Cam FBtr0345018|FBtr0304963|FBtr0088001|FBtr0304964 12273793|12273793|12273793|12273793 12274625|12278809|12274625|12276621 2R + 12274520 12274595 3'utr Cam FlyBase G15136.1 AAACCCCCCACTCTGTAAGCTAGCAAATTGTGTTTAAAGTATAATGAAAAAATTGTCGATTTCGTTGCGAGAAAGA 31 12274547 0.83175836 6 31 234 1 1.531478917 0.294117647 0.096774194 0.176470588 31 0 0 34 2R:12274520-12274595 6 Cam FBtr0088001|FBtr0304964|FBtr0345018|FBtr0304963 12273793|12273793|12273793|12273793 12274625|12276621|12274625|12278809 TGTGTT 6mer3-8 dme-miR-317-3p 2R + 12274505 12274586 3'utr Cam FlyBase G11497.1 AAAAGAAAATAATGAAAACCCCCCACTCTGTAAGCTAGCAAATTGTGTTTAAAGTATAATGAAAAAATTGTCGATTTCGTTG 21 12274547 0.984556926 4 18 139 0.9 1.130333768 0.3 0.333333333 0.533333333 21 2 1 27 2R:12274505-12274586 6 14 884 FBgn0000253 25804.84 1958.443333 3036.34 0.000542534 0.007148535 0.004610814 1 1 1 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 12275344 12275351 + 2R_12275344_12275351_+ 0.499467886 0.498340838 0.498904362 0.00079698 Cam FBtr0304963|FBtr0304964 12273793|12273793 12278809|12276621 2R + 12275325 12275363 3'utr Cam FlyBase G15139.1 ATACATATAAATACCTAATGTACTTAATGCAACAGGAAA 34 12275343 0.741351897 4 34 205 1 1.681241237 0.041666667 0.235294118 0.458333333 34 0 0 48 2R:12275325-12275363 8 Cam FBtr0304964|FBtr0304963 12273793|12273793 12276621|12278809 GTACTTAA 8mer-A1 dme-miR-252-5p 2R + 12275305 12275366 3'utr Cam FlyBase G11498.1 AACTCTATACATATATATATATACATATAAATACCTAATGTACTTAATGCAACAGGAAAACC 23 12275343 0.975109623 2 23 145 1 1.51851394 0.121212121 0.391304348 0.575757576 23 0 0 33 2R:12275305-12275366 8 28 885 FBgn0000253 25804.84 1958.443333 3036.34 0.001085068 0.014297069 0.009221629 1 1 1 0.15 dme-miR-305-3p 7mer-m1 TGTGCCG 2R 12322937 12322943 - 2R_12322937_12322943_- 0.794032376 0.760291011 0.777161694 0.023858773 CG8841 FBtr0087966|FBtr0087964|FBtr0087965 12322505|12322505|12322505 12323316|12323316|12323316 2R - 12322929 12322974 3'utr CG8841 FlyBase G22409.1 GTTTTTGTAATCTGTGACAGAAAATGTTCCTTGTGCCGTATATTTT 30 12322949 0.727617264 4 30 214 1 1.579783597 0.605263158 0.2 0.368421053 30 0 0 38 2R:12322929-12322974 7 CG8841 FBtr0087965|FBtr0087966|FBtr0087964 12322505|12322505|12322505 12323316|12323316|12323316 TGTGCCG 7mer-m1 dme-miR-305-3p 2R - 12322919 12322963 3'utr CG8841 FlyBase G17000.1 CTGTGACAGAAAATGTTCCTTGTGCCGTATATTTTATTGCATGGT 27 12322950 0.976292033 3 27 185 1 1.602059991 0.65 0.37037037 0.575 27 0 0 40 2R:12322919-12322963 7 27.5 886 FBgn0033713 204.63 7.073333333 10.83333333 0.134388897 3.887841659 2.538461538 6 7 6.5 0.15 dme-miR-282-5p 6mer2-7 GAGGCT 2R 12323140 12323145 - 2R_12323140_12323145_- 0.997599588 0.987897514 0.992748551 0.006860421 CG8841 FBtr0087966|FBtr0087964|FBtr0087965 12322505|12322505|12322505 12323316|12323316|12323316 2R - 12323123 12323171 3'utr CG8841 FlyBase G22410.1 TTTTGCTTATTGGCAACAAAAAAAATGAGGCTTATCAGTTACGATGTGG 104 12323146 0.963285008 5 104 426 1 2.075546961 0.201680672 0.125 0.235294118 104 0 0 119 2R:12323123-12323171 6 CG8841 FBtr0087965|FBtr0087966|FBtr0087964 12322505|12322505|12322505 12323316|12323316|12323316 GAGGCT 6mer2-7 dme-miR-282-5p 2R - 12323126 12323168 3'utr CG8841 FlyBase G17001.1 TGCTTATTGGCAACAAAAAAAATGAGGCTTATCAGTTACGATG 69 12323146 0.985004196 3 66 265 1 1.977723605 0.115789474 0.308823529 0.505263158 68 0 0 95 2R:12323126-12323168 6 83.5 887 FBgn0033713 204.63 7.073333333 10.83333333 0.40805356 11.80490104 7.707692308 1 1 1 0.15 dme-miR-277-3p 7mer-A1 GCATTTA 2R 12323254 12323260 - 2R_12323254_12323260_- 0.823145044 0.822814422 0.822979733 0.00023377 CG8841 FBtr0087966|FBtr0087964|FBtr0087965 12322505|12322505|12322505 12323316|12323316|12323316 2R - 12323234 12323382 stop_codon CG8841 FlyBase G22411.1 CGCAACGTGGAGCCTGCCATCTGGTACGATACGGAGGTCAAGCTCTTCGAGATTCAGCGCGTCTAGGTCAGTAAGTGGACTCCCAGCTACACCAGCAGCGCAATCGTAGCTTACACGCTTTGGCATTTACTGTAGTTAATTTATTTAGT 43 12323262 0.980589189 10 41 292 0.980392157 1.397940009 0.117647059 0.162790698 0.294117647 43 0 1 50 2R:12323234-12323382 7 CG8841 FBtr0087965|FBtr0087966|FBtr0087964 12322505|12322505|12322505 12323316|12323316|12323316 GCATTTA 7mer-A1 dme-miR-277-3p 2R - 12323240 12323283 3'utr CG8841 FlyBase G17002.1 GCAATCGTAGCTTACACGCTTTGGCATTTACTGTAGTTAATTTA 18 12323262 0.714205808 4 15 135 0.84 0.84509804 0.12 0.277777778 0.48 18 2 2 21 2R:12323240-12323283 7 25 888 FBgn0033713 204.63 7.073333333 10.83333333 0.122171725 3.534401508 2.307692308 2 2 2 0.15 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 12333706 12333712 + 2R_12333706_12333712_+ 0.813112445 0.814263188 0.813687816 0.000813738 garz FBtr0087897 12333495 12333860 2R + 12333648 12333746 3'utr garz FlyBase G15178.1 AGCTATCCAGAAAAACAAACCTAAATCACAGATGCGAAGTTCGGCTGAACCCCCTATAAGCTTTAGTAATGCAAATAGTTTAATTAATATTAATTAAAT 287 12333704 0.977839565 10 283 1868 0.984520124 2.201397124 0.018575851 0.111498258 0.210526316 287 4 1 318 2R:12333648-12333746 7 garz FBtr0087897 12333495 12333860 AGCTTTA 7mer-A1 dme-miR-79-3p 2R + 12333681 12333732 3'utr garz FlyBase G11521.1 GCGAAGTTCGGCTGAACCCCCTATAAGCTTTAGTAATGCAAATAGTTTAATT 188 12333704 0.827074714 6 185 1164 0.988679245 2.418301291 0.018867925 0.308510638 0.509433962 188 3 0 262 2R:12333681-12333732 7 226 889 FBgn0264560 903.09 16.44 25.09666667 0.250251913 13.74695864 9.005179971 2 2 2 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 12339635 12339642 - 2R_12339635_12339642_- 0.625328215 0.625330165 0.62532919 1.41E-06 CG8839 FBtr0087957|FBtr0087959|FBtr0087958|FBtr0087960 12339608|12339608|12339608|12339608 12339892|12339892|12339892|12339892 2R - 12339620 12339719 3'utr CG8839 FlyBase G22424.1 TCGATGTGGATTTATCTATTTTGTATGTGTTTTTAAATGTAATCTAATCATAGATCCGCGCGGATCCGTTCCCGTTTTGCATTTATAATAAATAATTGCA 26 12339643 0.991061188 8 24 260 0.933333333 1.146128036 0.166666667 0.153846154 0.266666667 26 1 1 28 2R:12339620-12339719 8 CG8839 FBtr0087958|FBtr0087960|FBtr0087957|FBtr0087959 12339608|12339608|12339608|12339608 12339892|12339892|12339892|12339892 TGCATTTA 8mer-A1 dme-miR-277-3p 2R - 12339626 12339704 3'utr CG8839 FlyBase G17018.1 CTATTTTGTATGTGTTTTTAAATGTAATCTAATCATAGATCCGCGCGGATCCGTTCCCGTTTTGCATTTATAATAAATA 20 12339643 0.748667447 7 17 180 0.911764706 1.014240439 0.176470588 0.5 0.705882353 20 1 2 31 2R:12339626-12339704 8 13.5 890 FBgn0033717 1014.353333 58.28666667 87.84 0.013308972 0.231613863 0.153688525 1 1 1 0.15 dme-miR-980-3p 6mer2-7 GCAGCT 2R 12339863 12339868 - 2R_12339863_12339868_- 0.835698137 0.919581495 0.877639816 0.059314521 CG8839 FBtr0087957|FBtr0087959|FBtr0087958|FBtr0087960 12339608|12339608|12339608|12339608 12339892|12339892|12339892|12339892 2R - 12339725 12339984 stop_codon CG8839 FlyBase G22425.1 CCAACTTCAATCAGGATCGACTTTGTTTGGCCGTTGCCGAGGAATTGGAGCGAGCCTTTGGCGGTTGGGCCAAGCCCGAAGTTCGGCTCTAGGAGCAGTCTCAAACGTGCAAGTATGCAGCTTAGCTAGCTTTTAGATAGTAGTGGTCAGGTTAACGTCCTGGTCTCCCCCCACCCATTACTAACTACCCCTACCCACCCGAGCATTCGCCTGGCGATGAAAGGTATTCCTTGTGTACTCCAGTGCCTCATTGTAATATC 87 12339868 0.978622762 29 83 564 0.962616822 1.53571597 0.261682243 0.16091954 0.317757009 87 2 2 103 2R:12339725-12339984 6 CG8839 FBtr0087958|FBtr0087960|FBtr0087957|FBtr0087959 12339608|12339608|12339608|12339608 12339892|12339892|12339892|12339892 GCAGCT 6mer2-7 dme-miR-980-3p 2R - 12339720 12339900 stop_codon CG8839 FlyBase G17019.1 GGCTCTAGGAGCAGTCTCAAACGTGCAAGTATGCAGCTTAGCTAGCTTTTAGATAGTAGTGGTCAGGTTAACGTCCTGGTCTCCCCCCACCCATTACTAACTACCCCTACCCACCCGAGCATTCGCCTGGCGATGAAAGGTATTCCTTGTGTACTCCAGTGCCTCATTGTAATATCAATTT 50 12339869 0.861418317 23 47 316 0.934210526 1.851258349 0.25 0.44 0.631578947 50 5 0 71 2R:12339720-12339900 6 23 891 FBgn0033717 1014.353333 58.28666667 87.84 0.022674545 0.394601395 0.261839709 0 1 0.5 0.15 dme-miR-252-5p 7mer-m8 GTACTTA 2R 12425347 12425353 + 2R_12425347_12425353_+ 0.588163826 0.588167177 0.588165501 2.40E-06 CG8520 FBtr0303222|FBtr0087926 12425250|12425250 12425459|12425459 2R + 12425333 12425376 3'utr CG8520 FlyBase G15212.1 ATTCACAATATCTTGTACTTACAAATTTCATATCGAAAATGCAA 16 12425346 0.939407031 2 16 150 1 1.342422681 0.045454545 0.25 0.454545455 16 0 0 22 2R:12425333-12425376 7 CG8520 FBtr0303222|FBtr0087926 12425250|12425250 12425459|12425459 GTACTTA 7mer-m8 dme-miR-252-5p 2R + 12425335 12425367 3'utr CG8520 FlyBase G11545.1 TCACAATATCTTGTACTTACAAATTTCATATCG 13 12425346 0.727559962 2 12 101 1 1.255272505 0.111111111 0.230769231 0.444444444 13 0 0 18 2R:12425335-12425367 7 14 892 FBgn0033734 185.89 13.06 20.03333333 0.075313357 1.071975498 0.698835275 1 1 1 0.15 dme-miR-1008-3p 8mer-A1 AGCTGTGA 2R 12436888 12436895 + 2R_12436888_12436895_+ 0.636637568 0.637421071 0.637029319 0.000554018 CG30051 FBtr0114521 12436846 12436990 2R + 12436864 12436958 3'utr CG30051 FlyBase G15218.1 ACATGCAGTTAAAAGCACAAGTAGAGCTGTGAAATTATATGTTATGCTTTAAATGGATTTTCCTGTCATCTAGATGTAGTTTGCTGCACAGCTCT 35 12436885 0.965363005 11 31 303 0.894736842 1.531478917 0.289473684 0.085714286 0.157894737 35 4 0 34 2R:12436864-12436958 8 CG30051 FBtr0114521 12436846 12436990 AGCTGTGA 8mer-A1 dme-miR-1008-3p 2R + 12436864 12436956 3'utr CG30051 FlyBase G11549.1 ACATGCAGTTAAAAGCACAAGTAGAGCTGTGAAATTATATGTTATGCTTTAAATGGATTTTCCTGTCATCTAGATGTAGTTTGCTGCACAGCT 25 12436898 0.787843206 12 23 182 0.925 1.267171728 0.2 0.44 0.65 25 2 1 37 2R:12436864-12436956 8 16.5 893 FBgn0050051 28.33333333 5.406666667 8.236666667 0.582352941 3.051787916 2.003237556 3 -10 -3.5 0.15 dme-miR-79-3p 7mer-m8 TAGCTTT 2R 12452116 12452122 + 2R_12452116_12452122_+ 0.618189054 0.618923716 0.618556385 0.000519441 Dyb FBtr0305077|FBtr0100298|FBtr0087929|FBtr0308613|FBtr0087930 12452039|12452039|12451987|12452039|12451987 12452916|12452916|12452916|12452916|12452916 2R + 12452028 12452156 stop_codon Dyb FlyBase G15221.1 GCAGAAGAACTAAGAACTGGCTACCAGTGGAAACCGCAGGACTGGGAATCTCCAGAGGCAGCTGGATGGATGAAGACGAATTCTCGCTTAGCTTTCTACCTTACCTTAACTCATACGTTGACTTAGAGC 22 12452115 0.983257715 12 22 141 1 1.361727836 0.260869565 0.045454545 0.086956522 22 0 0 23 2R:12452028-12452156 7 Dyb FBtr0087930|FBtr0087929|FBtr0308613|FBtr0305077|FBtr0100298 12451987|12451987|12452039|12452039|12452039 12452916|12452916|12452916|12452916|12452916 TAGCTTT 7mer-m8 dme-miR-79-3p 2R + 12452071 12452134 3'utr Dyb FlyBase G11550.1 GGGAATCTCCAGAGGCAGCTGGATGGATGAAGACGAATTCTCGCTTAGCTTTCTACCTTACCTT 17 12452115 0.98766672 5 17 151 1 1.380211242 0.083333333 0.294117647 0.5 17 0 0 24 2R:12452071-12452134 7 13 894 FBgn0033739 253.3333333 9.266666667 14.15666667 0.051315789 1.402877698 0.918295267 1 1 1 0.15 dme-miR-33-5p 6mer2-7 AATGCA 2R 12464944 12464949 + 2R_12464944_12464949_+ 0.999837251 0.79571731 0.89777728 0.144334636 Lac FBtr0087933 12464880 12465630 2R + 12464881 12464959 3'utr Lac FlyBase G15229.1 AGCCAATGGGCCCACGGCCGTCGACTCCAAGCGCTTCAGGTCCAATCCATCAACCAGCCCTCGAATGCATAAAACATAT 17 12464948 0.957507981 7 13 59 0.80952381 0.753327667 0.047619048 0.235294118 0.380952381 17 2 2 17 2R:12464881-12464959 6 Lac FBtr0087933 12464880 12465630 AATGCA 6mer2-7 dme-miR-33-5p 2R + 12464872 12464957 stop_codon Lac FlyBase G11558.1 CGCCAGATAAGCCAATGGGCCCACGGCCGTCGACTCCAAGCGCTTCAGGTCCAATCCATCAACCAGCCCTCGAATGCATAAAACAT 17 12464946 0.998399383 5 16 44 1 1.431363764 0 0.352941176 0.592592593 17 0 0 27 2R:12464872-12464957 6 9 895 FBgn0010238 279.02 15.78666667 24.22666667 0.032255752 0.570101351 0.371491469 -4 -2 -3 0.15 dme-miR-184-3p 6mer2-7 CCGTCC 2R 12465246 12465251 + 2R_12465246_12465251_+ 0.989652387 0.995125887 0.992389137 0.003870349 Lac FBtr0087933 12464880 12465630 2R + 12464976 12465277 3'utr Lac FlyBase G15230.1 GAAAACAAACATCGTGTAACCGCGCAATAGATGTCTCAAACGATTTCGGACACACCAACCCACATCCAGTTCTCAGTTCGTTTTGTAGCTTCTGCTTCCGTTTCCGTATAGTCCAGCCCAATTTTTGTACGTCCAATATTATGTCTTAAGTTAAGTATGATAAGTGAAGGGCCAACGATAACTAGACTATAATTTATTAGCACCCTAGAGCCGAACTCAAACCGAAATTAGACTCCAGCCCAGCCGTAAACGATGCATTTCACCTTGATCCCGTCCGTTTTGCTTTCTGATCTGGCACTGTA 852 12465244 0.954398896 52 806 7154 0.953712633 1.881252939 0.128254581 0.170187793 0.318225651 852 36 12 989 2R:12464976-12465277 6 Lac FBtr0087933 12464880 12465630 CCGTCC 6mer2-7 dme-miR-184-3p 2R + 12465016 12465303 3'utr Lac FlyBase G11559.1 CGATTTCGGACACACCAACCCACATCCAGTTCTCAGTTCGTTTTGTAGCTTCTGCTTCCGTTTCCGTATAGTCCAGCCCAATTTTTGTACGTCCAATATTATGTCTTAAGTTAAGTATGATAAGTGAAGGGCCAACGATAACTAGACTATAATTTATTAGCACCCTAGAGCCGAACTCAAACCGAAATTAGACTCCAGCCCAGCCGTAAACGATGCATTTCACCTTGATCCCGTCCGTTTTGCTTTCTGATCTGGCACTGTATATGTTTTAAATATTTTAATCTAAGC 512 12465244 0.985407996 44 490 4033 0.963824289 2.270678836 0.111111111 0.349609375 0.569767442 512 25 3 746 2R:12465016-12465303 6 498.5 896 FBgn0010238 279.02 15.78666667 24.22666667 1.786610279 31.57728041 20.57649972 2 2 2 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 12487565 12487572 - 2R_12487565_12487572_- 0.499954711 0.495919063 0.497936887 0.0028536 fdl FBtr0346633 12487449 12488439 2R - 12487555 12487618 3'utr fdl FlyBase G22470.1 TTCAACATTTGGAATGATTGATAGGATCCTTATGCAACTTGTTTTCGTACTTAAGACTTTCAAA 11 12487588 0.669967709 10 11 89 1 1.041392685 0.181818182 0 0 11 0 0 11 2R:12487555-12487618 8 fdl FBtr0346633 12487449 12488439 GTACTTAA 8mer-A1 dme-miR-252-5p 2R - 12487546 12487616 3'utr fdl FlyBase G17050.1 CAACATTTGGAATGATTGATAGGATCCTTATGCAACTTGTTTTCGTACTTAAGACTTTCAAAGAAAATATC 11 12487600 0.98570665 8 10 88 0.928571429 1.113943352 0 0.181818182 0.357142857 11 1 0 13 2R:12487546-12487616 8 3.5 897 FBgn0045063 1364.66 46.87666667 71.74333333 0.002564741 0.074664012 0.048785021 16 28 22 0.15 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2R 12507934 12507940 - 2R_12507934_12507940_- 0.806730023 0.807726191 0.807228107 0.00070442 vis FBtr0087945|FBtr0087945|FBtr0087944|FBtr0087944 12507894|12507894|12507894|12507894 12508268|12508268|12508268|12508268 2R - 12507925 12507954 3'utr vis FlyBase G22491.1 GTGTACACTACTGATACTTAAATAAAACAA 5 12507943 0.798321824 2 5 32 1 0.698970004 0.6 0 0 5 0 0 5 2R:12507925-12507954 7 vis FBtr0087945|FBtr0087945|FBtr0087944|FBtr0087944 12507894|12507894|12507894|12507894 12508268|12508268|12508268|12508268 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2R - 12507928 12507970 3'utr vis FlyBase G17062.1 TTTTAAACTTAACATTGTGTACACTACTGATACTTAAATAAAA 6 12507943 0.982665454 2 5 40 1 1.041392685 0.272727273 0.333333333 0.636363636 6 0 0 11 2R:12507928-12507970 7 4.5 898 FBgn0033748 6.173333333 0.356666667 0.556666667 0.728941685 12.61682243 8.083832335 3 3 3 0.15 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2R 12511757 12511763 - 2R_12511757_12511763_- 0.797994704 0.807507848 0.802751276 0.006726778 achi FBtr0339635|FBtr0339635|FBtr0087942|FBtr0087942|FBtr0087943|FBtr0087943 12511532|12511532|12511532|12511532|12511532|12511532 12512070|12512070|12512070|12512070|12512070|12512070 2R - 12511728 12511820 3'utr achi FlyBase G22494.1 AACAAATCGACTTAGTTTTGGACCTGACTCTTTTAAACTTAACATGTACACTACTGATACTTAAATAAAACATAAACAAGCATTTGAAATACA 12 12511766 0.985463607 6 12 97 1 1.113943352 0.153846154 0.083333333 0.153846154 12 0 0 13 2R:12511728-12511820 7 achi FBtr0339635|FBtr0339635|FBtr0087942|FBtr0087942|FBtr0087943|FBtr0087943 12511532|12511532|12511532|12511532|12511532|12511532 12512070|12512070|12512070|12512070|12512070|12512070 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2R - 12511730 12511817 3'utr achi FlyBase G17065.1 AAATCGACTTAGTTTTGGACCTGACTCTTTTAAACTTAACATGTACACTACTGATACTTAAATAAAACATAAACAAGCATTTGAAATA 8 12511766 0.980265247 6 8 60 1 0.954242509 0 0.125 0.222222222 8 0 0 9 2R:12511730-12511817 7 4.5 899 FBgn0033749 292.4933333 16.57 25.38 0.015384966 0.271575136 0.177304965 3 3 3 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 2R 12563256 12563261 + 2R_12563256_12563261_+ 0.700735605 0.597838748 0.649287176 0.072759096 fra FBtr0087821|FBtr0339649|FBtr0087822 12563118|12563118|12563118 12564184|12564184|12564184 2R + 12563199 12563366 3'utr fra FlyBase G15273.1 CTGTTTTATTTTATTGATTTAACTCGAATTTGTGAAATGCAGTGAACCGACTTGAATTGTGTTTCCCTCCAGCGAGGTTCGTTTAGCTTAAGTTAAACAAATGTGCGATATATTAATGACCGAAAAGAATTGTAAATACGAACGACGCCGCCATATAAATTTTTAAGT 537 12563261 0.906356551 27 516 4357 0.962204724 2.00788996 0.247244094 0.137802607 0.270866142 537 19 5 611 2R:12563199-12563366 6 fra FBtr0339649|FBtr0087822|FBtr0087821 12563118|12563118|12563118 12564184|12564184|12564184 TGTGTT 6mer3-8 dme-miR-317-3p 2R + 12563211 12563357 3'utr fra FlyBase G11584.2 ATTGATTTAACTCGAATTTGTGAAATGCAGTGAACCGACTTGAATTGTGTTTCCCTCCAGCGAGGTTCGTTTAGCTTAAGTTAAACAAATGTGCGATATATTAATGACCGAAAAGAATTGTAAATACGAACGACGCCGCCATATAAA 387 12563261 0.937597371 22 376 3107 0.974182444 2.053846427 0.244406196 0.354005168 0.569707401 387 11 4 566 2R:12563211-12563357 6 319.5 900 FBgn0011592 435.29 8.333333333 12.78666667 0.73399343 38.34 24.98696559 -5 -5 -5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2R 12563742 12563747 + 2R_12563742_12563747_+ 0.859095742 0.648224657 0.753660199 0.149108314 fra FBtr0087821|FBtr0339649|FBtr0087822 12563118|12563118|12563118 12564184|12564184|12564184 2R + 12563664 12563760 3'utr fra FlyBase G15278.1 AGAACGTACTTTTAATCTATTGTAACCCAATCAAACAATCAAAATCATTCTATCTAGACTTGTCCCCTAAAGTGTTCTTCTAGTTTGTTTATCCATT 74 12563741 0.993668423 11 64 798 0.88372093 1.403692338 0.093023256 0.148648649 0.26744186 74 8 2 76 2R:12563664-12563760 6 fra FBtr0339649|FBtr0087822|FBtr0087821 12563118|12563118|12563118 12564184|12564184|12564184 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 12563704 12563810 3'utr fra FlyBase G11586.1 AAAATCATTCTATCTAGACTTGTCCCCTAAAGTGTTCTTCTAGTTTGTTTATCCATTCATACGTATGAGTTTGATACGTGCCATTCAATGATTTGTCGCCAATCCAA 66 12563741 0.990837369 13 63 649 0.918367347 1.255272505 0.051020408 0.378787879 0.581632653 66 4 4 90 2R:12563704-12563810 6 44.5 901 FBgn0011592 435.29 8.333333333 12.78666667 0.102230697 5.34 3.480187696 1 1 1 0.15 dme-miR-12-5p 6mer3-8 AATACT 2R 12575330 12575335 - 2R_12575330_12575335_- 0.999710851 0.539064271 0.769387561 0.325726335 Sin3A FBtr0303565|FBtr0087889|FBtr0087890|FBtr0339651|FBtr0087887|FBtr0347014|FBtr0339650|FBtr0087888|FBtr0304683|FBtr0303566 12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238 12575974|12578533|12575974|12577703|12575974|12578162|12575974|12577560|12575974|12577560 2R - 12575314 12575363 3'utr Sin3A FlyBase G22506.1 ACATACAAACCGTGTACAATTCCTTGTGAATACTATTGTTTATATATTTT 38 12575341 0.71286501 10 35 333 0.941176471 1.681241237 0.411764706 0.210526316 0.411764706 38 3 0 48 2R:12575314-12575363 6 Sin3A FBtr0303566|FBtr0304683|FBtr0087888|FBtr0339650|FBtr0347014|FBtr0087887|FBtr0339651|FBtr0087890|FBtr0087889|FBtr0303565 12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238 12577560|12575974|12577560|12575974|12578162|12575974|12577703|12575974|12578533|12575974 AATACT 6mer3-8 dme-miR-12-5p 2R - 12575239 12575364 3'utr Sin3A FlyBase G17074.1 CACATACAAACCGTGTACAATTCCTTGTGAATACTATTGTTTATATATTTTACGCGTTTAAGGTTATTAAGTTAAATTGTAAAAATGTATTGCGCAGATATTAAAACAAAAGTTTATCAAAAGTGA 28 12575341 0.984253006 15 28 224 1 1.643452676 0.227272727 0.392857143 0.613636364 28 0 0 44 2R:12575239-12575364 6 22.5 902 FBgn0022764 4529.02 67.97 103.85 0.004967962 0.331028395 0.216658642 6 6 6 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 2R 12575718 12575724 - 2R_12575718_12575724_- 0.78232965 0.780943095 0.781636372 0.000980404 Sin3A FBtr0303565|FBtr0087889|FBtr0087890|FBtr0339651|FBtr0087887|FBtr0347014|FBtr0339650|FBtr0087888|FBtr0304683|FBtr0303566 12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238 12575974|12578533|12575974|12577703|12575974|12578162|12575974|12577560|12575974|12577560 2R - 12575658 12575952 3'utr Sin3A FlyBase G22508.1 CGGCAGTGGTCGCTGCATGGCCAGATTCTTCATTCACATGACGACAATGAGAAGATGTGGGATGAATTGCCTGCATTGAAATAAATAGTGTTTTAAATGTGATACCAGTTCCTCGACGCGGTCATCGAGATTGCAGCTATACCAACGCGCGATCGACTGTTTAATGTCCGGCATGGCATTGGGCTCTGGAAATTGATTGATGAACGAAGGAAAGCTCTTTTTCATATTGTACAAAAAGTCATTTAATCTTAGGCGAAAGTGCTCCTAAATAAGAATTTTATAGTCTTACGTTGCA 413 12575726 0.840210234 60 385 2778 0.939516129 2.066325925 0.221774194 0.157384988 0.298387097 413 27 3 466 2R:12575658-12575952 7 Sin3A FBtr0303566|FBtr0304683|FBtr0087888|FBtr0339650|FBtr0347014|FBtr0087887|FBtr0339651|FBtr0087890|FBtr0087889|FBtr0303565 12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238 12577560|12575974|12577560|12575974|12578162|12575974|12577703|12575974|12578533|12575974 GTACAAA 7mer-A1 dme-miR-305-5p 2R - 12575667 12575952 3'utr Sin3A FlyBase G17076.1 CGGCAGTGGTCGCTGCATGGCCAGATTCTTCATTCACATGACGACAATGAGAAGATGTGGGATGAATTGCCTGCATTGAAATAAATAGTGTTTTAAATGTGATACCAGTTCCTCGACGCGGTCATCGAGATTGCAGCTATACCAACGCGCGATCGACTGTTTAATGTCCGGCATGGCATTGGGCTCTGGAAATTGATTGATGAACGAAGGAAAGCTCTTTTTCATATTGTACAAAAAGTCATTTAATCTTAGGCGAAAGTGCTCCTAAATAAGAATTTTATAGTCT 271 12575726 0.984678798 50 234 1867 0.871536524 1.760924848 0.214105793 0.332103321 0.544080605 271 46 5 346 2R:12575667-12575952 7 102 903 FBgn0022764 4529.02 67.97 103.85 0.022521428 1.500662057 0.982185845 2 2 2 0.15 dme-miR-33-5p 6mer3-8 CAATGC 2R 12576069 12576074 - 2R_12576069_12576074_- 0.999995121 0.87014165 0.935068386 0.09182022 Sin3A FBtr0087889|FBtr0339651|FBtr0347014|FBtr0087888|FBtr0303566 12575238|12575238|12575238|12575238|12575238 12578533|12577703|12578162|12577560|12577560 2R - 12576059 12576208 3'utr Sin3A FlyBase G22510.1 GTTCCGGCGGTCAATTCCGCGCCATCAGGCTCAGTTTCAACGGTGAACAATGTACAGGGCTCGGCGGCAGTATCCTCAACTTCCCACTCGATGTGCAACAGTAGCATTTTGTCCGCGGACTCCACCACCAATACCAATGCGTCAGCACAG 25 12576076 0.948718114 13 24 101 0.933333333 1.447158031 0.3 0.2 0.333333333 25 2 0 28 2R:12576059-12576208 6 Sin3A FBtr0303566|FBtr0087888|FBtr0347014|FBtr0339651|FBtr0087889 12575238|12575238|12575238|12575238|12575238 12577560|12577560|12578162|12577703|12578533 CAATGC 6mer3-8 dme-miR-33-5p 2R - 12576062 12576170 3'utr Sin3A FlyBase G17077.1 AACGGTGAACAATGTACAGGGCTCGGCGGCAGTATCCTCAACTTCCCACTCGATGTGCAACAGTAGCATTTTGTCCGCGGACTCCACCACCAATACCAATGCGTCAGCA 16 12576077 0.986292657 8 16 63 1 1.361727836 0.173913043 0.375 0.565217391 16 0 0 23 2R:12576062-12576170 6 7 904 FBgn0022764 4529.02 67.97 103.85 0.001545588 0.102986612 0.067404911 2 3 2.5 0.15 dme-miR-33-5p 7mer-m1 AATGCAC 2R 12616087 12616093 + 2R_12616087_12616093_+ 0.800470924 0.796496458 0.798483691 0.002810325 CG45086 FBtr0344532|FBtr0344531 12613656|12613656 12619820|12619820 2R + 12616010 12616097 5'utr-coding CG45086 FlyBase G15300.1 AGCAATAGCAATAGCCAAAGAGAGCCTGGATCGTAAGCGCTGGAGGAGGTCTGCAGAGCGAGCAAAGCCGAAGTACAAATGCACCAAT 13 12616089 0.994925438 5 12 26 0.888888889 1.204119983 0.166666667 0.307692308 0.5 13 2 0 16 2R:12616010-12616097 7 CG45086 FBtr0344531|FBtr0344532 12613656|12613656 12619820|12619820 AATGCAC 7mer-m1 dme-miR-33-5p 2R + 12615988 12616092 5'utr-coding CG45086 FlyBase G11601.1 AACTTAGCGTAGACCCGTAATTAGCAATAGCAATAGCCAAAGAGAGCCTGGATCGTAAGCGCTGGAGGAGGTCTGCAGAGCGAGCAAAGCCGAAGTACAAATGCA 12 12616089 0.935843116 7 9 37 0.782608696 0.954242509 0.086956522 0.583333333 0.782608696 12 4 1 18 2R:12615988-12616092 6 4 905 FBgn0266487 1140.346667 45.66 70.03666667 0.003507705 0.08760403 0.057112941 -2 -2 -2 0.15 dme-miR-995-5p 6mer3-8 AATTCG 2R 12618047 12618052 + 2R_12618047_12618052_+ 0.98671156 0.821755783 0.904233672 0.116641365 CG45086 FBtr0344532|FBtr0344531 12613656|12613656 12619820|12619820 2R + 12617992 12618095 3'utr CG45086 FlyBase G15304.1 AATGGAGGAATCTAAAGCTTTATTTCGTACTATAATTACATACCCTTGGTTTCAAAATTCGTCAGTTATTCTTTTCCTGAATAAGAAGGACTTGTTGGAAGAGA 25 12618049 0.987974227 11 24 210 0.96969697 1.204119983 0.060606061 0.2 0.393939394 25 0 1 32 2R:12617992-12618095 6 CG45086 FBtr0344531|FBtr0344532 12613656|12613656 12619820|12619820 AATTCG 6mer3-8 dme-miR-995-5p 2R + 12617993 12618060 3'utr CG45086 FlyBase G11606.1 ATGGAGGAATCTAAAGCTTTATTTCGTACTATAATTACATACCCTTGGTTTCAAAATTCGTCAGTTAT 17 12618037 0.788994099 8 14 151 0.869565217 1 0.043478261 0.352941176 0.52173913 17 2 1 20 2R:12617993-12618060 6 10 906 FBgn0266487 1140.346667 45.66 70.03666667 0.008769263 0.219010074 0.142782352 -2 10 4 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 2R 12619174 12619180 + 2R_12619174_12619180_+ 0.521219441 0.521223021 0.521221231 2.55E-06 CG45086 FBtr0344532|FBtr0344531 12613656|12613656 12619820|12619820 2R + 12619137 12619195 stop_codon CG45086 FlyBase G15306.1 TTTGGTCTAAACTGGATTTGGATCGAAAAACTATTTTTGTGATTTTTATACAAACACAC 34 12619172 0.865569687 9 33 412 0.976744186 1.62324929 0 0.176470588 0.348837209 34 1 0 42 2R:12619137-12619195 7 CG45086 FBtr0344531|FBtr0344532 12613656|12613656 12619820|12619820 TGTGATT 7mer-m1 dme-miR-308-3p 2R + 12619137 12619189 stop_codon CG45086 FlyBase G11608.1 TTTGGTCTAAACTGGATTTGGATCGAAAAACTATTTTTGTGATTTTTATACAA 18 12619173 0.993389353 5 18 219 1 1.431363764 0 0.388888889 0.592592593 18 0 0 27 2R:12619137-12619189 7 24 907 FBgn0266487 1140.346667 45.66 70.03666667 0.021046232 0.525624179 0.342677645 2 1 1.5 0.15 dme-miR-184-3p 8mer-A1 TCCGTCCA 2R 12621531 12621538 + 2R_12621531_12621538_+ 0.631128811 0.631118546 0.631123679 7.28E-06 Galphaq FBtr0304955 12619145 12623197 2R + 12621497 12621551 3'utr Galphaq FlyBase G15313.1 GACATTCACACACTGACATACATATATATAGTTTTCCGTCCAATGAATTGCATCA 41 12621530 0.986135704 6 40 339 0.979591837 1.681241237 0.306122449 0.170731707 0.306122449 41 1 0 48 2R:12621497-12621551 8 Galphaq FBtr0304955 12619145 12623197 TCCGTCCA 8mer-A1 dme-miR-184-3p 2R + 12621511 12621545 3'utr Galphaq FlyBase G11613.1 GACATACATATATATAGTTTTCCGTCCAATGAATT 23 12621530 0.699414063 3 21 186 0.896551724 1.414973348 0.413793103 0.260869565 0.413793103 23 3 0 26 2R:12621511-12621545 8 31.5 908 FBgn0004435 2624.776667 94.95333333 145.51 0.012001021 0.331741908 0.216479967 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 12628846 12628852 - 2R_12628846_12628852_- 0.801299622 0.80023898 0.800769301 0.000749957 muskelin FBtr0087886|FBtr0087886|FBtr0087886|FBtr0333103|FBtr0333103|FBtr0333103 12628695|12628695|12628695|12628695|12628695|12628695 12629027|12629027|12629027|12629027|12629027|12629027 2R - 12628818 12628862 3'utr muskelin FlyBase G22558.1 ATGATTTTATTGTGATAGTTCACGTGTACTGAAACCCCGGCTAAA 35 12628837 0.786825647 7 34 301 0.977272727 1.33243846 0.386363636 0.228571429 0.386363636 35 0 1 43 2R:12628818-12628862 7 muskelin FBtr0333103|FBtr0333103|FBtr0333103|FBtr0087886|FBtr0087886|FBtr0087886 12628695|12628695|12628695|12628695|12628695|12628695 12629027|12629027|12629027|12629027|12629027|12629027 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 12628818 12628882 3'utr muskelin FlyBase G17109.1 ATGCAAAGCATGACATATATATGATTTTATTGTGATAGTTCACGTGTACTGAAACCCCGGCTAAA 22 12628838 0.90473748 7 20 158 0.935483871 1.462397998 0.35483871 0.272727273 0.483870968 22 2 0 29 2R:12628818-12628882 7 25 909 FBgn0033757 131.3333333 5.313333333 8.116666667 0.19035533 4.705144291 3.080082136 -15 -14 -14.5 0.15 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2R 12640418 12640424 + 2R_12640418_12640424_+ 0.802362388 0.784714405 0.793538397 0.01247902 Iswi FBtr0087843|FBtr0087843|FBtr0087842|FBtr0087842|FBtr0087841|FBtr0087841 12640336|12640336|12640336|12640336|12640336|12640336 12640628|12640628|12640628|12640628|12640628|12640628 2R + 12640341 12640472 3'utr Iswi FlyBase G15351.1 GACAAAGCAAACAGATATTTTTCTGAGATTCGGCTCTACACTCAGCACTAGGCAGTTAAATAGTTAAGACAAGCGATTACTTAAACATATTTTACTCTATATAGTTAATAGTTCATATCTCACGCCGGAAGC 67 12640417 0.972699139 19 64 402 0.966292135 1.633468456 0.101123596 0.23880597 0.426966292 67 2 1 86 2R:12640341-12640472 7 Iswi FBtr0087843|FBtr0087843|FBtr0087842|FBtr0087842|FBtr0087841|FBtr0087841 12640336|12640336|12640336|12640336|12640336|12640336 12640628|12640628|12640628|12640628|12640628|12640628 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2R + 12640358 12640437 3'utr Iswi FlyBase G11638.1 TTTTTCTGAGATTCGGCTCTACACTCAGCACTAGGCAGTTAAATAGTTAAGACAAGCGATTACTTAAACATATTTTACTC 18 12640417 0.880993099 7 17 109 0.928571429 1.414973348 0.035714286 0.444444444 0.642857143 18 2 0 26 2R:12640358-12640437 7 16.5 910 FBgn0011604 1337.66 45.99333333 70.94 0.012334973 0.358747645 0.232590922 1 1 1 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 12640583 12640589 + 2R_12640583_12640589_+ 0.661321335 0.660034466 0.6606779 0.000909905 Iswi FBtr0087843|FBtr0087842|FBtr0087841 12640336|12640336|12640336 12640628|12640628|12640628 2R + 12640538 12640622 3'utr Iswi FlyBase G15352.1 ACATTACTATTGCGTGCCGCTGTATTCTATTCCAAATAATTGTATTGTGTTCTAAGACTATAATCATTATATTTATATAAATCAA 64 12640582 0.719276264 16 63 566 0.973684211 1.86923172 0.118421053 0.1875 0.315789474 64 2 0 74 2R:12640538-12640622 7 Iswi FBtr0087843|FBtr0087842|FBtr0087841 12640336|12640336|12640336 12640628|12640628|12640628 TGTGTTC 7mer-m8 dme-miR-317-3p 2R + 12640504 12640623 3'utr Iswi FlyBase G11640.1 AAGTTTTTTTAAACACCCGCCTACACATCCGACTACATTACTATTGCGTGCCGCTGTATTCTATTCCAAATAATTGTATTGTGTTCTAAGACTATAATCATTATATTTATATAAATCAAC 44 12640582 0.987468251 16 43 378 0.985714286 1.838849091 0.2 0.409090909 0.628571429 44 1 0 69 2R:12640504-12640623 7 27 911 FBgn0011604 1337.66 45.99333333 70.94 0.020184501 0.5870416 0.380603327 1 1 1 0.15 dme-miR-2a-2-5p 6mer2-7 GATGAG 2R 12659919 12659924 - 2R_12659919_12659924_- 0.512196266 0.886504375 0.69935032 0.264675796 nemy FBtr0339740|FBtr0087870|FBtr0087867|FBtr0087869|FBtr0302151|FBtr0339742|FBtr0339741|FBtr0087868 12659495|12659495|12659495|12659495|12659495|12659495|12659495|12659587 12660243|12660243|12660243|12660243|12660243|12660243|12660243|12660243 2R - 12659911 12660018 3'utr nemy FlyBase G22574.1 ACATCATACACTTAGACTACTCCATATGGCTATAATCAAAACCTTTGCCCACTTTCAATCTCTCAGTAGGTGTGTAGGATTAGGAATCTCAGCAGATGAGCAGAAGAC 24 12659947 0.949103642 12 22 163 0.923076923 1.079181246 0.076923077 0.083333333 0.153846154 24 1 1 24 2R:12659911-12660018 6 nemy FBtr0302151|FBtr0339742|FBtr0339741|FBtr0087868|FBtr0339740|FBtr0087870|FBtr0087867|FBtr0087869 12659495|12659495|12659495|12659587|12659495|12659495|12659495|12659495 12660243|12660243|12660243|12660243|12660243|12660243|12660243|12660243 GATGAG 6mer2-7 dme-miR-2a-2-5p 2R - 12659915 12659952 3'utr nemy FlyBase G17121.1 TAGGTGTGTAGGATTAGGAATCTCAGCAGATGAGCAGA 8 12659945 0.65022374 5 7 48 0.866666667 1.113943352 0.333333333 0.625 0.8 8 2 0 13 2R:12659915-12659952 6 6 912 FBgn0261673 7.666666667 0.46 0.703333333 0.782608696 13.04347826 8.530805687 23 21 22 0.15 dme-miR-34-5p 6mer2-7 ACTGCC 2R 1266501 1266506 + 2R_1266501_1266506_+ 0.999556415 0.999959771 0.999758093 0.000285247 CG40191 FBtr0113825 1266025 1267747 2R + 1266460 1266520 3'utr CG40191 FlyBase G12545.1 ATACATACAAGCTGTAATATGTTGCGCTATACTTCAAAGTTACTGCCTTACACTGACCGAA 22 1266499 0.961511361 6 22 164 1 1.414973348 0.115384615 0.181818182 0.307692308 22 0 0 26 2R:1266460-1266520 6 CG40191 FBtr0113825 1266025 1267747 ACTGCC 6mer2-7 dme-miR-34-5p 2R + 1266458 1266512 3'utr CG40191 FlyBase G9611.1 TTATACATACAAGCTGTAATATGTTGCGCTATACTTCAAAGTTACTGCCTTACAC 14 1266499 0.980579351 7 14 96 1 1.322219295 0.142857143 0.357142857 0.571428571 14 0 0 21 2R:1266458-1266512 6 15.5 913 FBgn0058191 1436.35 98.49 150.6766667 0.010791242 0.157376383 0.102869279 2 2 2 0.15 dme-miR-252-5p 6mer3-8 GTACTT 2R 12670961 12670966 - 2R_12670961_12670966_- 0.997634287 0.995987409 0.996810848 0.001164534 CG42708 FBtr0302976|FBtr0302977|FBtr0302975|FBtr0302974|FBtr0302973|FBtr0344191|FBtr0302972 12670481|12670481|12670481|12670481|12670604|12670481|12670604 12671175|12671175|12671175|12671175|12671175|12671175|12671175 2R - 12670817 12670996 3'utr CG42708 FlyBase G22583.1 CGAGGCGGATCCACTGCACGAGCGGCATTTGTACTTGTACTTGGTAGCGCTTAGTTAGCCACAAAAATTCCATGTTATCCTACGAAACAATGACAATAATCTTAACGGATATCTAACTTTCCCACATAACTGGGGTCTGTGACCTGCCTAAATGTATTGCATTCGTACTTGTCAATTGAT 105 12670968 0.984096722 21 102 806 0.959016393 2.068185862 0.073770492 0.161904762 0.278688525 105 5 0 117 2R:12670817-12670996 6 CG42708 FBtr0302974|FBtr0302975|FBtr0302977|FBtr0302976|FBtr0302972|FBtr0344191|FBtr0302973 12670481|12670481|12670481|12670481|12670604|12670481|12670604 12671175|12671175|12671175|12671175|12671175|12671175|12671175 GTACTT 6mer3-8 dme-miR-252-5p 2R - 12670926 12670991 3'utr CG42708 FlyBase G17127.1 CGGATCCACTGCACGAGCGGCATTTGTACTTGTACTTGGTAGCGCTTAGTTAGCCACAAAAATTCC 30 12670968 0.986021563 6 29 243 0.977272727 1.633468456 0.045454545 0.266666667 0.5 30 1 0 43 2R:12670926-12670991 6 54 914 FBgn0261625 1259.506667 54.11 83.17333333 0.042873929 0.997967104 0.649246553 2 2 2 0.15 dme-miR-1006-3p 7mer-m8 CGAATTT 2R 12691440 12691446 - 2R_12691440_12691446_- 0.573899527 0.546434778 0.560167152 0.019420476 CG8768 FBtr0087871 12691306 12691537 2R - 12691421 12691461 3'utr CG8768 FlyBase G22611.1 AAGCGCAAATTAAAACGAATTTCTGCGATAGGGGGATTTAT 34 12691441 0.697862937 2 32 214 0.944444444 1.531478917 0.027777778 0.058823529 0.111111111 34 2 0 34 2R:12691421-12691461 7 CG8768 FBtr0087871 12691306 12691537 CGAATTT 7mer-m8 dme-miR-1006-3p 2R - 12691420 12691455 3'utr CG8768 FlyBase G17144.1 AAATTAAAACGAATTTCTGCGATAGGGGGATTTATG 26 12691441 0.682294446 3 25 158 0.971428571 1.531478917 0 0.230769231 0.428571429 26 1 0 34 2R:12691420-12691455 7 30 915 FBgn0033769 43.33333333 4.476666667 6.923333333 0.692307692 6.701414743 4.333172845 -5 -5 -5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 12750677 12750683 + 2R_12750677_12750683_+ 0.579842875 0.584845355 0.582344115 0.003537302 CG42663 FBtr0302645|FBtr0302645|FBtr0302645|FBtr0302644|FBtr0302644|FBtr0302644|FBtr0310576|FBtr0310576|FBtr0310576 12750597|12750597|12750597|12750597|12750597|12750597|12750597|12750597|12750597 12751545|12751545|12751545|12751545|12751545|12751545|12751545|12751545|12751545 2R + 12750651 12750763 3'utr CG42663 FlyBase G15384.1 TATTTAAAGATTTAAAAAGACTAAATTGTGATATATTCAAACAAAACAAAACCGAATCGAGAGTTACAGAAGCATTAAGAGATGATGGCCAGGATGAGCAGGCACGTTTTGTA 394 12750676 0.982193439 16 369 2739 0.936734694 1.36078269 0.026530612 0.198473282 0.357142857 393 12 19 459 2R:12750651-12750763 7 CG42663 FBtr0310576|FBtr0310576|FBtr0310576|FBtr0302644|FBtr0302644|FBtr0302644|FBtr0302645|FBtr0302645|FBtr0302645 12750597|12750597|12750597|12750597|12750597|12750597|12750597|12750597|12750597 12751545|12751545|12751545|12751545|12751545|12751545|12751545|12751545|12751545 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 12750652 12750762 3'utr CG42663 FlyBase G11663.1 ATTTAAAGATTTAAAAAGACTAAATTGTGATATATTCAAACAAAACAAAACCGAATCGAGAGTTACAGAAGCATTAAGAGATGATGGCCAGGATGAGCAGGCACGTTTTGT 290 12750676 0.825928625 16 271 1963 0.935323383 1.53379516 0.017412935 0.3 0.495024876 290 16 10 376 2R:12750652-12750762 7 323 916 FBgn0261545 747.68 22.44 34.5 0.432002996 14.39393939 9.362318841 1 1 1 0.15 dme-miR-34-5p 8mer-A1 CACTGCCA 2R 12750827 12750834 + 2R_12750827_12750834_+ 0.667495052 0.632204177 0.649849615 0.024954435 CG42663 FBtr0302645|FBtr0302644|FBtr0310576 12750597|12750597|12750597 12751545|12751545|12751545 2R + 12750794 12750848 3'utr CG42663 FlyBase G15385.1 AAATTTTTGGATGATGTTTTACCTTGTAAGCGGCACTGCCAACTGTTCCCCCTAT 10 12750817 0.981057335 8 10 74 1 1.041392685 0 0.1 0.181818182 10 0 0 11 2R:12750794-12750848 8 CG42663 FBtr0310576|FBtr0302644|FBtr0302645 12750597|12750597|12750597 12751545|12751545|12751545 CACTGCCA 8mer-A1 dme-miR-34-5p 2R + 12750814 12750846 3'utr CG42663 FlyBase G11664.1 ACCTTGTAAGCGGCACTGCCAACTGTTCCCCCT 9 12750837 0.761680561 4 7 30 1 1.146128036 0.285714286 0.444444444 0.642857143 9 0 0 14 2R:12750814-12750846 8 6 917 FBgn0261545 747.68 22.44 34.5 0.008024823 0.267379679 0.173913043 10 -10 0 0.15 dme-miR-7-5p 7mer-m8 GTCTTCC 2R 12751040 12751046 + 2R_12751040_12751046_+ 0.705674583 0.705222183 0.705448383 0.000319895 CG42663 FBtr0302645|FBtr0302644|FBtr0310576 12750597|12750597|12750597 12751545|12751545|12751545 2R + 12751020 12751092 3'utr CG42663 FlyBase G15386.1 GTAGGTGAACCAAGACTGTAGTCTTCCGCACAAGTCGAGTGTATTCGTAGGACTTGGTTAGAGTTAACCACAT 26 12751038 0.716306019 7 24 131 0.935483871 1.462397998 0.129032258 0.115384615 0.258064516 26 2 0 29 2R:12751020-12751092 7 CG42663 FBtr0310576|FBtr0302644|FBtr0302645 12750597|12750597|12750597 12751545|12751545|12751545 GTCTTCC 7mer-m8 dme-miR-7-5p 2R + 12751009 12751050 3'utr CG42663 FlyBase G11665.1 ATGGTCACGTAGTAGGTGAACCAAGACTGTAGTCTTCCGCAC 14 12751038 0.911693186 4 14 59 1 1.342422681 0.227272727 0.5 0.681818182 14 0 0 22 2R:12751009-12751050 7 16 918 FBgn0261545 747.68 22.44 34.5 0.021399529 0.713012478 0.463768116 2 2 2 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 12751141 12751148 + 2R_12751141_12751148_+ 0.625328152 0.625322239 0.625325195 4.24E-06 CG42663 FBtr0302645|FBtr0302644|FBtr0310576 12750597|12750597|12750597 12751545|12751545|12751545 2R + 12751094 12751199 3'utr CG42663 FlyBase G15387.1 AGCTAATCCGGATTAGTGCTCCTCAGACACAACAGCAGTTGAACATTTGCATTTAAGGGTGAAATATTTCAAAGTGTTTACGATGCAGTATATGATGCATATATAT 91 12751140 0.829062939 8 89 684 0.981481481 2.025305865 0.518518519 0.153846154 0.287037037 91 2 0 106 2R:12751094-12751199 8 CG42663 FBtr0310576|FBtr0302644|FBtr0302645 12750597|12750597|12750597 12751545|12751545|12751545 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 12751094 12751203 3'utr CG42663 FlyBase G11667.1 AGCTAATCCGGATTAGTGCTCCTCAGACACAACAGCAGTTGAACATTTGCATTTAAGGGTGAAATATTTCAAAGTGTTTACGATGCAGTATATGATGCATATATATATAT 63 12751140 0.931687536 7 60 479 0.953488372 1.612783857 0.453488372 0.253968254 0.453488372 63 3 1 82 2R:12751094-12751203 8 58 919 FBgn0261545 747.68 22.44 34.5 0.077573293 2.584670232 1.68115942 1 1 1 0.15 dme-miR-2535b-3p 6mer2-7 CGTGAG 2R 12751453 12751458 + 2R_12751453_12751458_+ 0.836781196 0.945615227 0.891198212 0.076957259 CG42663 FBtr0302645|FBtr0302644|FBtr0310576 12750597|12750597|12750597 12751545|12751545|12751545 2R + 12751225 12751515 3'utr CG42663 FlyBase G15388.1 ATATATATATATGTATACGGTTTCTAAGCGAACATTAGACGACAACCATAACAATAAACTGTACATAGCAGTCGTTCTTAAAGCTAATGATAATGATAATGACAAGCTCTTCTTTAACCGTAGTTAGCTCCTCCGGGCTGCTGCCACCGACTACTTCATTGCAGCAGCCCGTTTCCTAAGCATATATACATACATACTTACACTATATAGAACAGAACGCATTATGATCGTGAGGAGGGAATCTAGACGTAAGCTCGTATGAACATTATAAATGTATTTTCTTAGCGTAGC 67 12751449 0.972085064 27 64 385 0.948051948 1.86332286 0.220779221 0.119402985 0.233766234 67 4 0 73 2R:12751225-12751515 6 CG42663 FBtr0310576|FBtr0302644|FBtr0302645 12750597|12750597|12750597 12751545|12751545|12751545 CGTGAG 6mer2-7 dme-miR-2535b-3p 2R + 12751415 12751518 3'utr CG42663 FlyBase G11669.1 TACATACTTACACTATATAGAACAGAACGCATTATGATCGTGAGGAGGGAATCTAGACGTAAGCTCGTATGAACATTATAAATGTATTTTCTTAGCGTAGCGAG 16 12751449 0.968468152 8 16 94 1 1.301029996 0.4 0.1875 0.35 16 0 0 20 2R:12751415-12751518 6 13 920 FBgn0261545 747.68 22.44 34.5 0.017387117 0.579322638 0.376811594 4 4 4 0.15 dme-miR-11-3p 7mer-m1 TGTGATG 2R 12849573 12849579 - 2R_12849573_12849579_- 0.535592902 0.535469929 0.535531415 8.70E-05 CG17574 FBtr0306580|FBtr0087816|FBtr0306583|FBtr0344926|FBtr0306579|FBtr0306581|FBtr0337029|FBtr0306582|FBtr0331979 12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356 12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736 2R - 12849552 12849644 3'utr CG17574 FlyBase G22629.2 AACTCCAAACTCCTGGTAAAAAACCAAGTGAAAGCGATCGCACAACGAGCCATTTTTATATTCCATGTGATGTATGTAAAGTGTACATATAAC 35 12849585 0.984357853 14 31 306 0.957446809 1.653212514 0.042553191 0.285714286 0.468085106 35 2 0 45 2R:12849552-12849644 7 CG17574 FBtr0306579|FBtr0344926|FBtr0087816|FBtr0306583|FBtr0306580|FBtr0331979|FBtr0306582|FBtr0337029|FBtr0306581 12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356 12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736 TGTGATG 7mer-m1 dme-miR-11-3p 2R - 12849544 12849622 3'utr CG17574 FlyBase G17161.1 ACCAAGTGAAAGCGATCGCACAACGAGCCATTTTTATATTCCATGTGATGTATGTAAAGTGTACATATAACTTAAGCGC 32 12849585 0.848008398 13 30 251 0.897959184 1.643452676 0 0.34375 0.571428571 32 5 0 44 2R:12849544-12849622 7 25 921 FBgn0033777 586.8266667 68.93 105.5833333 0.042602018 0.362686784 0.236779795 6 6 6 0.15 dme-miR-184-3p 6mer3-8 TCCGTC 2R 12849703 12849708 - 2R_12849703_12849708_- 0.998726362 0.998329257 0.99852781 0.000280792 CG17574 FBtr0306580|FBtr0087816|FBtr0306583|FBtr0344926|FBtr0306579|FBtr0306581|FBtr0337029|FBtr0306582|FBtr0331979 12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356 12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736 2R - 12849659 12849758 stop_codon CG17574 FlyBase G22630.1 CAATCCCCACTTTGGCCAGTGAAATCGCACTGTGAACTGAGGATCCCCTTTCCGTCTCGTTATAGCTTTTTTACTCAGCTGAACACTTTACTTTCCATGT 490 12849709 0.794385924 20 483 3738 0.988391376 2.298125005 0.615257048 0.173469388 0.328358209 490 5 2 596 2R:12849659-12849758 6 CG17574 FBtr0306579|FBtr0344926|FBtr0087816|FBtr0306583|FBtr0306580|FBtr0331979|FBtr0306582|FBtr0337029|FBtr0306581 12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356 12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736 TCCGTC 6mer3-8 dme-miR-184-3p 2R - 12849670 12849738 stop_codon CG17574 FlyBase G17162.1 GAAATCGCACTGTGAACTGAGGATCCCCTTTCCGTCTCGTTATAGCTTTTTTACTCAGCTGAACACTTT 340 12849709 0.954244996 10 338 2607 0.996062992 2.704150517 0.572834646 0.376470588 0.582677165 340 2 0 506 2R:12849670-12849738 6 398 922 FBgn0033777 586.8266667 68.93 105.5833333 0.678224121 5.773973596 3.769534333 1 1 1 0.15 dme-miR-318-3p 7mer-m8 CCCAGTG 2R 12877548 12877554 - 2R_12877548_12877554_- 0.705949693 0.705920849 0.705935271 2.04E-05 Nmda1 FBtr0089878|FBtr0089877|FBtr0309294|FBtr0089875|FBtr0332883|FBtr0089876|FBtr0089873|FBtr0089874|FBtr0309295 12877092|12877092|12877092|12877092|12877092|12877092|12877092|12877092|12877092 12877654|12877654|12877654|12877654|12877654|12877654|12877654|12877654|12877654 2R - 12877420 12877586 3'utr Nmda1 FlyBase G22638.1 ATTGTTGTCGCGTAATCTCATCGGTGTGCTCCCCCAGTGGAGGTAATCTTCAACTAACGAATTACTCAAATACTTACAAATCTATCTACTTCGTGTTGTGTTTGCCCATTTTCCCCGTTTCCTTCTAGTTCTAAATGTCAACTAAGGCTATATGAACTACTTACTTT 42 12877565 0.986632358 23 40 359 0.961538462 1.698970004 0.211538462 0.166666667 0.326923077 42 2 0 50 2R:12877420-12877586 7 Nmda1 FBtr0309295|FBtr0089874|FBtr0089873|FBtr0089876|FBtr0332883|FBtr0089875|FBtr0309294|FBtr0089877|FBtr0089878 12877092|12877092|12877092|12877092|12877092|12877092|12877092|12877092|12877092 12877654|12877654|12877654|12877654|12877654|12877654|12877654|12877654|12877654 CCCAGTG 7mer-m8 dme-miR-318-3p 2R - 12877495 12877595 3'utr Nmda1 FlyBase G17167.1 TACACGAATATTGTTGTCGCGTAATCTCATCGGTGTGCTCCCCCAGTGGAGGTAATCTTCAACTAACGAATTACTCAAATACTTACAAATCTATCTACTTC 23 12877566 0.991751118 8 16 167 0.694444444 0.920818754 0.305555556 0.434782609 0.638888889 23 9 2 25 2R:12877495-12877595 7 10 923 FBgn0013305 2589.41 187.14 285.2633333 0.003861884 0.05343593 0.035055329 11 12 11.5 0.15 dme-miR-14-3p 7mer-m8 AAGACTG 2R 12883098 12883104 + 2R_12883098_12883104_+ 0.495985196 0.495059347 0.495522271 0.00065471 Aats-asp FBtr0339391|FBtr0087784|FBtr0332882 12882904|12882904|12882904 12883168|12883168|12883168 2R + 12883020 12883117 3'utr Aats-asp FlyBase G15419.1 CCCAATCGTGAGTGTTTTATCCTTCTTCTCAAGACTAACATGCTGCAAAGTTGTTAAACAACGAGAAAAATGTACGGGAAGACTGCCTAGAGTCAAAT 30 12883090 0.936546566 7 27 113 0.942857143 1.217483944 0.114285714 0.133333333 0.257142857 30 1 1 33 2R:12883020-12883117 7 Aats-asp FBtr0332882|FBtr0087784|FBtr0339391 12882904|12882904|12882904 12883168|12883168|12883168 AAGACTG 7mer-m8 dme-miR-14-3p 2R + 12883079 12883121 3'utr Aats-asp FlyBase G11700.1 AACGAGAAAAATGTACGGGAAGACTGCCTAGAGTCAAATTTAT 20 12883107 0.831912073 4 19 62 0.964285714 1.431363764 0.214285714 0.3 0.5 20 1 0 27 2R:12883079-12883121 7 23 924 FBgn0002069 853.6433333 54.38666667 82.66666667 0.026943337 0.422897769 0.278225806 8 -9 -0.5 0.15 dme-bantam-3p 6mer2-7 GATCTC 2R 12924544 12924549 + 2R_12924544_12924549_+ 0.999771835 0.997347354 0.998559594 0.00171431 CG13319 FBtr0087788|FBtr0300890 12924346|12924420 12924664|12924664 2R + 12924513 12924642 5'utr CG13319 FlyBase G15454.2 ACTCTACGCACTCCATCAGCTAACTATCTGGGATCTCCGATTCCCGATCTCCGCTCAGACGTCATGCGGCGGCCGAGTGAGCACGAACTTTAAACGTGTATCGGTGATACGAATTTTGTACAATAAATTT 92 12924540 0.980347566 19 76 578 0.844036697 1.264817823 0.100917431 0.152173913 0.28440367 92 13 4 92 2R:12924513-12924642 6 CG13319 FBtr0300890|FBtr0087788 12924420|12924346 12924664|12924664 GATCTC 6mer2-7 dme-bantam-3p 2R + 12924466 12924653 5'utr CG13319 FlyBase G11726.1 CGTCTATTTCGGGGACCGGCGGCTACCCCACGGACGCAGCTTCACGTACTCTACGCACTCCATCAGCTAACTATCTGGGATCTCCGATTCCCGATCTCCGCTCAGACGTCATGCGGCGGCCGAGTGAGCACGAACTTTAAACGTGTATCGGTGATACGAATTTTGTACAATAAATTTATTGCCCTAAG 94 12924540 0.984274652 21 86 571 0.938356164 1.835690571 0.212328767 0.404255319 0.616438356 94 8 1 137 2R:12924466-12924653 6 38 925 FBgn0033781 91.88 17.2 26.15333333 0.413582934 2.209302326 1.452969666 4 4 4 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 2R 12934398 12934403 - 2R_12934398_12934403_- 0.981148051 0.989306298 0.985227175 0.005768719 CG13322 FBtr0087803|FBtr0087804|FBtr0087805 12934232|12934232|12934232 12934751|12934751|12934751 2R - 12934376 12934440 3'utr CG13322 FlyBase G22668.1 AGCTCAATCATCGGAAACCACATGTGTATATAACTAATTGACTTGAAGGCGGAGCAGAAGGTAGA 36 12934403 0.973285421 6 35 208 0.977272727 1.33243846 0.272727273 0.222222222 0.363636364 36 0 1 43 2R:12934376-12934440 6 CG13322 FBtr0087805|FBtr0087804|FBtr0087803 12934232|12934232|12934232 12934751|12934751|12934751 TTGACT 6mer3-8 dme-miR-1012-3p 2R - 12934375 12934421 3'utr CG13322 FlyBase G17188.1 ACATGTGTATATAACTAATTGACTTGAAGGCGGAGCAGAAGGTAGAC 25 12934403 0.972303646 4 23 135 0.903225806 1.146128036 0.032258065 0.24 0.387096774 25 2 1 28 2R:12934375-12934421 6 28.5 926 FBgn0033784 342.93 20 30.73333333 0.08310734 1.425 0.927331887 0 0 0 0.15 dme-miR-14-3p 6mer3-8 AAGACT 2R 12934462 12934467 - 2R_12934462_12934467_- 0.999999821 0.999982469 0.999991145 1.22E-05 CG13322 FBtr0087803|FBtr0087804|FBtr0087805 12934232|12934232|12934232 12934751|12934751|12934751 2R - 12934455 12934507 3'utr CG13322 FlyBase G22669.1 CTGGCCGGAGCAACAACGGACGCATTTGTTTATGTAATTAAAGACTTATCGAC 7 12934459 0.962017095 5 6 33 1 1.041392685 0.090909091 0.428571429 0.636363636 7 0 0 11 2R:12934455-12934507 6 CG13322 FBtr0087805|FBtr0087804|FBtr0087803 12934232|12934232|12934232 12934751|12934751|12934751 AAGACT 6mer3-8 dme-miR-14-3p 2R - 12934445 12934476 3'utr CG13322 FlyBase G17189.1 ATGTAATTAAAGACTTATCGACAAGAATTTTG 11 12934470 0.759583719 6 9 68 0.846153846 0.740362689 0.307692308 0.181818182 0.307692308 11 1 1 11 2R:12934445-12934476 6 7.5 927 FBgn0033784 342.93 20 30.73333333 0.021870353 0.375 0.244034707 -8 3 -2.5 0.15 dme-miR-184-5p 7mer-A1 GATAAGA 2R 12966173 12966179 - 2R_12966173_12966179_- 0.782305086 0.782881092 0.782593089 0.000407294 Psc FBtr0345375 12965995 12966517 2R - 12966143 12966297 3'utr Psc FlyBase G22677.1 ACACAATCCAGCCGAGTTTAGGCTGCCCCCCTTCGGTAGTAGTGAGCCAACGCTCTGTAAATATATAATGATATATACAAATGTCTAGACTTAGGAATTGTATTAAAAATAAACGGAGGATAAGACAGTGATTCAGAATCGATATATATATGCAG 196 12966169 0.942631067 17 189 778 0.959821429 2.33243846 0.107142857 0.117346939 0.227678571 196 9 0 215 2R:12966143-12966297 7 Psc FBtr0345375 12965995 12966517 GATAAGA 7mer-A1 dme-miR-184-5p 2R - 12966130 12966199 3'utr Psc FlyBase G17195.1 TGTATTAAAAATAAACGGAGGATAAGACAGTGATTCAGAATCGATATATATATGCAGTTATACGAATTAT 118 12966169 0.9431917 7 109 429 0.928176796 1.380211242 0.093922652 0.423728814 0.624309392 118 7 6 168 2R:12966130-12966199 7 142 928 FBgn0005624 501.4 9.713333333 15.04 0.28320702 14.6190803 9.441489362 -10 -10 -10 0.15 dme-bantam-3p 7mer-m8 TGATCTC 2R 13163108 13163114 + 2R_13163108_13163114_+ 0.341900718 0.514642924 0.428271821 0.122147181 Nrk FBtr0087728 13162649 13163484 2R + 13163098 13163149 3'utr Nrk FlyBase G15511.1 TTATACCCTCTGATCTCTCGATCTCGATCGAATAGTCTGCCACAACGAACGC 17 13163128 0.973396519 6 17 110 1 1.301029996 0.35 0.176470588 0.3 17 0 0 20 2R:13163098-13163149 7 Nrk FBtr0087728 13162649 13163484 TGATCTC 7mer-m8 dme-bantam-3p 2R + 13163099 13163150 3'utr Nrk FlyBase G11767.1 TATACCCTCTGATCTCTCGATCTCGATCGAATAGTCTGCCACAACGAACGCA 11 13163128 0.979659276 4 11 78 1 1.230448921 0.058823529 0.454545455 0.647058824 11 0 0 17 2R:13163099-13163150 7 9 929 FBgn0020391 38.01666667 1.393333333 2.09 0.236738273 6.459330144 4.306220096 -20 -20 -20 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 13163173 13163179 + 2R_13163173_13163179_+ 0.661533993 0.661498178 0.661516086 2.53E-05 Nrk FBtr0087728 13162649 13163484 2R + 13163157 13163195 3'utr Nrk FlyBase G15512.1 ACGTCTCGTATCCATATCTAGTCTGTAGATTAAGTTTAT 27 13163180 0.728612195 6 22 282 0.84375 0.954242509 0.0625 0.111111111 0.25 27 3 2 27 2R:13163157-13163195 7 Nrk FBtr0087728 13162649 13163484 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 13163158 13163193 3'utr Nrk FlyBase G11768.1 CGTCTCGTATCCATATCTAGTCTGTAGATTAAGTTT 14 13163180 0.724604605 5 14 138 1 1.278753601 0.105263158 0.285714286 0.473684211 14 0 0 19 2R:13163158-13163193 7 20.5 930 FBgn0020391 38.01666667 1.393333333 2.09 0.539237177 14.71291866 9.80861244 -7 -7 -7 0.15 dme-miR-995-5p 6mer2-7 ATTCGG 2R 13176977 13176982 - 2R_13176977_13176982_- 0.91261773 0.784710035 0.848663882 0.090444402 CG17724 FBtr0339516|FBtr0310499|FBtr0334468|FBtr0087771|FBtr0344197 13176092|13176092|13176551|13176551|13176551 13177352|13177424|13177424|13177424|13177424 2R - 13176939 13177023 3'utr CG17724 FlyBase G22744.1 AAACACACACACGCGAATGGATTTGAGGCGGAATCAAATGCATTCGGTTCACGGCAAACTTAAGAGCATCGTAAATTAAAATAAT 16 13177001 0.945059237 8 16 67 1 1.255272505 0.111111111 0.125 0.222222222 16 0 0 18 2R:13176939-13177023 6 CG17724 FBtr0087771|FBtr0334468|FBtr0310499|FBtr0339516|FBtr0344197 13176551|13176551|13176092|13176092|13176551 13177424|13177424|13177424|13177352|13177424 ATTCGG 6mer2-7 dme-miR-995-5p 2R - 13176933 13177021 3'utr CG17724 FlyBase G17246.1 ACACACACACGCGAATGGATTTGAGGCGGAATCAAATGCATTCGGTTCACGGCAAACTTAAGAGCATCGTAAATTAAAATAATTTTTAC 12 13177005 0.952605222 8 12 56 1 1.230448921 0 0.416666667 0.588235294 12 0 0 17 2R:13176933-13177021 6 4 931 FBgn0033802 568.9 19.27666667 29.39333333 0.007031113 0.207504755 0.13608528 19 23 21 0.15 dme-miR-283-5p 8mer-A1 TGATATTA 2R 13177119 13177126 - 2R_13177119_13177126_- 0.59010815 0.58931169 0.58970992 0.00056314 CG17724 FBtr0339516|FBtr0310499|FBtr0334468|FBtr0087771|FBtr0344197 13176092|13176092|13176551|13176551|13176551 13177352|13177424|13177424|13177424|13177424 2R - 13177089 13177163 3'utr CG17724 FlyBase G22745.2 AGGAATATTAACTCAAACTTAAGCCAAGCTAACTCATTGATATTACCACACTGTTGGATGTGCATACGAAATTTA 96 13177127 0.980161189 8 93 660 0.972222222 1.720159303 0.12962963 0.125 0.222222222 96 2 1 105 2R:13177089-13177163 8 CG17724 FBtr0087771|FBtr0334468|FBtr0310499|FBtr0339516|FBtr0344197 13176551|13176551|13176092|13176092|13176551 13177424|13177424|13177424|13177352|13177424 TGATATTA 8mer-A1 dme-miR-283-5p 2R - 13177095 13177163 3'utr CG17724 FlyBase G17247.1 AGGAATATTAACTCAAACTTAAGCCAAGCTAACTCATTGATATTACCACACTGTTGGATGTGCATACGA 45 13177127 0.979371299 4 44 300 0.984375 1.498310554 0.078125 0.288888889 0.5 45 0 1 63 2R:13177095-13177163 8 65.5 932 FBgn0033802 568.9 19.27666667 29.39333333 0.11513447 3.397890368 2.228396462 1 1 1 0.15 dme-miR-31a-5p 7mer-A1 CTTGCCA 2R 13202654 13202660 + 2R_13202654_13202660_+ 0.729603677 0.475918545 0.602761111 0.179382525 Aats-val FBtr0087735|FBtr0087734|FBtr0333148 13202593|13202593|13202593 13202709|13202709|13202709 2R + 13202631 13202683 3'utr Aats-val FlyBase G15545.1 TAATTGATATTTAGTACGCTTGCCTTGCCAGCTGCTGGGCTTTACTTAAAAAA 16 13202645 0.692754513 9 15 127 0.944444444 1.230448921 0.166666667 0.125 0.222222222 16 1 0 17 2R:13202631-13202683 7 Aats-val FBtr0333148|FBtr0087734|FBtr0087735 13202593|13202593|13202593 13202709|13202709|13202709 CTTGCCA 7mer-A1 dme-miR-31a-5p 2R + 13202629 13202671 3'utr Aats-val FlyBase G11793.1 GGTAATTGATATTTAGTACGCTTGCCTTGCCAGCTGCTGGGCT 8 13202641 0.784879586 6 8 64 1 1.079181246 0.166666667 0.125 0.416666667 8 0 0 12 2R:13202629-13202671 7 11.5 933 FBgn0027079 605.9033333 21.83 33.28 0.018979925 0.526797984 0.345552885 9 13 11 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 2R 13408076 13408082 - 2R_13408076_13408082_- 0.443131002 0.443120789 0.443125895 7.21E-06 CG18278 FBtr0087716 13408040 13408169 2R - 13408055 13408134 3'utr CG18278 FlyBase G22804.1 AAAACCAAATTCAAGTCCGCTGGGCGCATATAGATTTCATATTCAGATATCATGTGATTTATGTTGCTATATACATAGTC 31 13408076 0.916453104 13 31 283 1 1.602059991 0.075 0.225806452 0.4 31 0 0 40 2R:13408055-13408134 7 CG18278 FBtr0087716 13408040 13408169 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 13408063 13408097 3'utr CG18278 FlyBase G17296.1 CATATTCAGATATCATGTGATTTATGTTGCTATAT 12 13408076 0.64236075 6 11 115 0.95 1.278753601 0.05 0.5 0.7 12 1 0 19 2R:13408063-13408097 7 18 934 FBgn0033836 254.63 18.40666667 28.13666667 0.070690806 0.977906556 0.639734629 -6 -6 -6 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 2R 13412803 13412809 - 2R_13412803_13412809_- 0.442967976 0.442806582 0.442887279 0.000114127 CG30059 FBtr0087715 13412767 13412896 2R - 13412790 13412861 3'utr CG30059 FlyBase G22812.1 AAAACCAAATTCAAGTCCGCTGGGCGCATATAGATTTCATATTCAGATATCATGTGATTTATGTTGCTATAT 29 13412803 0.94115204 9 26 262 0.894736842 1.531478917 0.026315789 0.275862069 0.447368421 29 4 0 34 2R:13412790-13412861 7 CG30059 FBtr0087715 13412767 13412896 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 13412793 13412849 3'utr CG30059 FlyBase G17301.1 AAGTCCGCTGGGCGCATATAGATTTCATATTCAGATATCATGTGATTTATGTTGCTA 18 13412803 0.665547843 6 14 158 0.80952381 0.929418926 0 0.166666667 0.285714286 18 3 1 17 2R:13412793-13412849 7 17.5 935 FBgn0260475 435.0366667 31.53666667 48.24333333 0.040226494 0.554909629 0.362744421 -6 -6 -6 0.15 dme-bantam-3p 7mer-A1 GATCTCA 2R 13415490 13415496 - 2R_13415490_13415496_- 0.821162349 0.822097519 0.821629934 0.000661286 CG42321 FBtr0299763|FBtr0299755|FBtr0299757|FBtr0299762|FBtr0299761|FBtr0299754|FBtr0299764|FBtr0306698|FBtr0299758|FBtr0299759 13414976|13414976|13414976|13414976|13414976|13414976|13414976|13414976|13414976|13414976 13415517|13415517|13417569|13415517|13415517|13415517|13417569|13415517|13416931|13417569 2R - 13415482 13415519 stop_codon CG42321 FlyBase G22815.1 AAACCGAAAACGATGGGACTCTGGATCTCACGGTGCAC 13 13415498 0.951568484 4 12 57 0.888888889 1.204119983 0.722222222 0.307692308 0.5 13 2 0 16 2R:13415482-13415519 7 CG42321 FBtr0306698|FBtr0299764|FBtr0299762|FBtr0299761|FBtr0299755|FBtr0299759|FBtr0299754|FBtr0299757|FBtr0299758|FBtr0299763 13414976|13414976|13414976|13414976|13414976|13414976|13414976|13414976|13414976|13414976 13415517|13417569|13415517|13415517|13415517|13417569|13415517|13417569|13416931|13415517 GATCTCA 7mer-A1 dme-bantam-3p 2R - 13415470 13415518 stop_codon CG42321 FlyBase G17304.1 AACCGAAAACGATGGGACTCTGGATCTCACGGTGCACATGTATATAGGA 14 13415498 0.966578041 5 13 69 0.947368421 1.255272505 0.421052632 0.357142857 0.526315789 14 1 0 18 2R:13415470-13415518 7 13.5 936 FBgn0259221 191.07 4.566666667 6.95 0.070654734 2.95620438 1.942446043 2 2 2 0.15 dme-miR-7-5p 6mer2-7 TCTTCC 2R 13417546 13417551 - 2R_13417546_13417551_- 0.999999431 0.952923309 0.97646137 0.03328783 CG42321 FBtr0299757|FBtr0299764|FBtr0299759 13414976|13414976|13414976 13417569|13417569|13417569 2R - 13417529 13417580 stop_codon CG42321 FlyBase G22817.1 TGCACATGTGAGGATGTGGACGATGGACTTCTTCCCTCATCGAAGGCAAATC 26 13417557 0.865026351 3 25 171 0.933333333 1.447158031 0.533333333 0.153846154 0.266666667 26 2 0 28 2R:13417529-13417580 6 CG42321 FBtr0299764|FBtr0299759|FBtr0299757 13414976|13414976|13414976 13417569|13417569|13417569 TCTTCC 6mer2-7 dme-miR-7-5p 2R - 13417530 13417574 stop_codon CG42321 FlyBase G17306.1 TGTGAGGATGTGGACGATGGACTTCTTCCCTCATCGAAGGCAAAT 17 13417557 0.922485591 2 17 116 1 1.380211242 0.666666667 0.294117647 0.5 17 0 0 24 2R:13417530-13417574 6 21 937 FBgn0259221 191.07 4.566666667 6.95 0.109907364 4.598540146 3.021582734 6 6 6 0.15 dme-miR-317-3p 6mer2-7 GTGTTC 2R 1343931 1343936 - 2R_1343931_1343936_- 0.868611624 0.988748961 0.928680292 0.08494997 Yeti FBtr0344755 1343401 1344290 2R - 1343911 1343959 3'utr Yeti FlyBase G19234.1 AAAAGACGACGCCACCGATAATAGTGTTCGTTTTGTGATTAGATTTGCT 17 1343938 0.989078419 6 17 163 1 1.255272505 0.111111111 0.058823529 0.111111111 17 0 0 18 2R:1343911-1343959 6 Yeti FBtr0344755 1343401 1344290 GTGTTC 6mer2-7 dme-miR-317-3p 2R - 1343925 1343958 3'utr Yeti FlyBase G14622.1 AAAGACGACGCCACCGATAATAGTGTTCGTTTTG 10 1343938 0.982753503 2 9 70 0.952380952 1.301029996 0.238095238 0.6 0.80952381 10 1 0 20 2R:1343925-1343958 6 13.5 938 FBgn0267398 2383.886667 322.18 496.1 0.005663021 0.041902042 0.027212256 2 2 2 0.15 dme-miR-14-3p 7mer-m8 AAGACTG 2R 13439843 13439849 - 2R_13439843_13439849_- 0.67136448 0.671118478 0.671241479 0.000173948 cnn FBtr0309891|FBtr0309889|FBtr0100656|FBtr0309893|FBtr0309892|FBtr0087703|FBtr0100654|FBtr0087704 13439312|13439312|13439312|13439312|13439312|13439312|13439312|13439312 13440071|13440071|13440071|13440071|13440071|13440071|13440071|13440071 2R - 13439815 13439867 3'utr cnn FlyBase G22833.1 ATACCCATGCATTTTCTAAAGACTGTTGAGGGAATCGAACCCATTGAATGAAC 72 13439842 0.769312979 8 69 532 0.9625 1.886490725 0.0375 0.111111111 0.2 72 3 0 77 2R:13439815-13439867 7 cnn FBtr0100654|FBtr0087704|FBtr0309892|FBtr0087703|FBtr0100656|FBtr0309893|FBtr0309891|FBtr0309889 13439312|13439312|13439312|13439312|13439312|13439312|13439312|13439312 13440071|13440071|13440071|13440071|13440071|13440071|13440071|13440071 AAGACTG 7mer-m8 dme-miR-14-3p 2R - 13439765 13439869 3'utr cnn FlyBase G17320.1 AAATACCCATGCATTTTCTAAAGACTGTTGAGGGAATCGAACCCATTGAATGAACTATCACACACACACACACACACACCTGTTTTAAGCACAAAACGAAACTAA 64 13439842 0.980833802 8 61 433 0.958333333 1.662757832 0.072916667 0.390625 0.59375 64 3 1 92 2R:13439765-13439869 7 60 939 FBgn0013765 2282.81 64.11 98.51 0.026283396 0.935891437 0.609075221 -7 -7 -7 0.15 dme-miR-8-3p 6mer3-8 CAGTAT 2R 13440050 13440055 - 2R_13440050_13440055_- 0.779659404 0.948934341 0.864296873 0.11969543 cnn FBtr0309891|FBtr0309889|FBtr0100656|FBtr0309893|FBtr0309892|FBtr0087703|FBtr0100654|FBtr0087704 13439312|13439312|13439312|13439312|13439312|13439312|13439312|13439312 13440071|13440071|13440071|13440071|13440071|13440071|13440071|13440071 2R - 13439982 13440129 stop_codon cnn FlyBase G22834.1 ACTAAAAACGCACAATGTGCTGCGAAACGTTCGCTCAAACATGGAGAATGAGTTATAACGATCGCGCCGACGTCCAGTATATCAGCATTAACCCGAGAGGCCATTCACCCAATGTTCAATTGCCATTTCTTGCCATTCTTATATTTTG 65 13440048 0.973510686 14 62 382 0.948051948 1.86332286 0.155844156 0.153846154 0.285714286 65 4 0 73 2R:13439982-13440129 6 cnn FBtr0100654|FBtr0087704|FBtr0309892|FBtr0087703|FBtr0100656|FBtr0309893|FBtr0309891|FBtr0309889 13439312|13439312|13439312|13439312|13439312|13439312|13439312|13439312 13440071|13440071|13440071|13440071|13440071|13440071|13440071|13440071 CAGTAT 6mer3-8 dme-miR-8-3p 2R - 13439966 13440084 stop_codon cnn FlyBase G17321.1 GAATGAGTTATAACGATCGCGCCGACGTCCAGTATATCAGCATTAACCCGAGAGGCCATTCACCCAATGTTCAATTGCCATTTCTTGCCATTCTTATATTTTGTATGCATTGTATTTTG 39 13440048 0.97690422 9 38 254 0.981818182 1.73239376 0.236363636 0.384615385 0.563636364 39 1 0 54 2R:13439966-13440084 6 35.5 940 FBgn0013765 2282.81 64.11 98.51 0.01555101 0.553735767 0.360369506 -7 -7 -7 0.15 dme-miR-307a-3p 7mer-A1 GTTGTGA 2R 13453361 13453367 + 2R_13453361_13453367_+ 0.468914564 0.376735776 0.42282517 0.065180255 cbs FBtr0087666|FBtr0309886|FBtr0309887 13453210|13453210|13453210 13453393|13453393|13453393 2R + 13453345 13453384 3'utr cbs FlyBase G15585.2 AGTATTTATTTCTACCGTTGTGATTTTTATAATAAACTAA 53 13453369 0.62152229 7 49 599 0.958333333 1.361727836 0 0.283018868 0.472222222 53 1 2 69 2R:13453345-13453384 7 cbs FBtr0309886|FBtr0309887|FBtr0087666 13453210|13453210|13453210 13453393|13453393|13453393 GTTGTGA 7mer-A1 dme-miR-307a-3p 2R + 13453345 13453385 3'utr cbs FlyBase G11826.1 AGTATTTATTTCTACCGTTGTGATTTTTATAATAAACTAAC 39 13453370 0.666561879 6 36 461 0.905660377 1.204119983 0 0.307692308 0.490566038 39 3 2 48 2R:13453345-13453385 7 45.5 941 FBgn0086757 496.6633333 26.83333333 41.18333333 0.091611353 1.695652174 1.104815864 -8 -9 -8.5 0.15 dme-miR-7-5p 6mer3-8 GTCTTC 2R 13453888 13453893 - 2R_13453888_13453893_- 0.64665537 0.999978469 0.823316919 0.24983716 arr FBtr0087702 13453638 13454435 2R - 13453874 13453929 3'utr arr FlyBase G22845.1 TGAAGCAATATTGACGAATATGCGACTAATTGAACTGTCTTCTTAATTGTTATAAA 8 13453910 0.974292148 5 7 50 1 0.954242509 0.444444444 0.125 0.222222222 8 0 0 9 2R:13453874-13453929 6 arr FBtr0087702 13453638 13454435 GTCTTC 6mer3-8 dme-miR-7-5p 2R - 13453843 13453920 3'utr arr FlyBase G17329.1 ATTGACGAATATGCGACTAATTGAACTGTCTTCTTAATTGTTATAAACACCAAAAAGTGCCTCATTAATACGTGTGTT 10 13453900 0.980594262 8 10 74 1 1.113943352 0.153846154 0.3 0.461538462 10 0 0 13 2R:13453843-13453920 6 4 942 FBgn0000119 295 5.866666667 8.943333333 0.013559322 0.681818182 0.447260529 17 7 12 0.15 dme-miR-14-3p 6mer2-7 AGACTG 2R 13454139 13454144 - 2R_13454139_13454144_- 0.981217129 0.973695161 0.977456145 0.005318786 arr FBtr0087702 13453638 13454435 2R - 13454039 13454302 3'utr arr FlyBase G22846.1 GAGTTTAATTGGTCATTTAAGGCTTTAACTAATTTTAATCATAGCTTAGAGAGAGCGTCCATGCCTGAAGGACTTATTCGATCTCGTTAAGTTTCATTTTGCCAGATAGCCCGAAATAGATTGCAGTACAATGCTTTGCAGCTACCATACGCAACAATAGACTGCAGATTATTAGCAATTACCTTAGGTATAAATGATGTAATATTCGATAGGTGAGACAGTCTTTTGAAATTCCGTGTGCCAAATTTTCCGAAACCTGACAGA 285 13454145 0.971995387 36 268 1709 0.9375 1.896250562 0.113095238 0.150877193 0.279761905 285 18 3 315 2R:13454039-13454302 6 arr FBtr0087702 13453638 13454435 AGACTG 6mer2-7 dme-miR-14-3p 2R - 13454118 13454316 3'utr arr FlyBase G17330.1 GTAAATATGTATGTGAGTTTAATTGGTCATTTAAGGCTTTAACTAATTTTAATCATAGCTTAGAGAGAGCGTCCATGCCTGAAGGACTTATTCGATCTCGTTAAGTTTCATTTTGCCAGATAGCCCGAAATAGATTGCAGTACAATGCTTTGCAGCTACCATACGCAACAATAGACTGCAGATTATTAGCAATTACCTT 178 13454145 0.973304798 24 166 1008 0.95 1.693726949 0.153846154 0.342696629 0.55 178 9 4 247 2R:13454118-13454316 6 79 943 FBgn0000119 295 5.866666667 8.943333333 0.26779661 13.46590909 8.833395453 1 1 1 0.15 dme-miR-12-5p 6mer2-7 ATACTC 2R 13487501 13487506 - 2R_13487501_13487506_- 0.999999579 0.965233262 0.982616421 0.024583486 bbc FBtr0087700|FBtr0332928|FBtr0305993|FBtr0087699 13487180|13487180|13486632|13486632 13487567|13487567|13487567|13487567 2R - 13487408 13487539 3'utr bbc FlyBase G22864.1 AATTTTACAAATTTACGTCGTTAGAACCGAGGGATACTCGTAGAAGCAGGCGAAGTGGGAGCGCAATTAATACAAACCAAACCCAACAAAATTCACCGTCGATGTTTTGGCTAAATAAACATAACCAAAACC 31 13487505 0.96222896 13 28 139 0.916666667 1.51851394 0.138888889 0.161290323 0.277777778 31 3 0 33 2R:13487408-13487539 6 bbc FBtr0305993|FBtr0087699|FBtr0087700|FBtr0332928 13486632|13486632|13487180|13487180 13487567|13487567|13487567|13487567 ATACTC 6mer2-7 dme-miR-12-5p 2R - 13487487 13487584 stop_codon bbc FlyBase G17342.1 AGAGCAAACCGCACTAGGCTCCGGTTATGCGCTACATTAATTAGTAATTTTACAAATTTACGTCGTTAGAACCGAGGGATACTCGTAGAAGCAGGCGA 23 13487521 0.955617325 10 22 110 0.973684211 1.568201724 0.131578947 0.434782609 0.657894737 23 1 0 37 2R:13487487-13487584 6 16 944 FBgn0033844 1978.716667 102.1933333 155.1166667 0.008086049 0.156565986 0.103148168 -1 15 7 0.15 dme-miR-283-5p 7mer-A1 GATATTA 2R 13495322 13495328 - 2R_13495322_13495328_- 0.771432024 0.772710143 0.772071084 0.000903753 drk FBtr0087696|FBtr0087697|FBtr0087698 13495220|13495220|13495220 13496977|13496977|13496977 2R - 13495316 13495355 3'utr drk FlyBase G22881.1 AATAAAGCAGGCAATTGACAAGGTTTAGATATTAACTAAC 38 13495331 0.937114394 3 38 233 1 1.662757832 0.130434783 0.131578947 0.282608696 38 0 0 46 2R:13495316-13495355 7 drk FBtr0087698|FBtr0087696|FBtr0087697 13495220|13495220|13495220 13496977|13496977|13496977 GATATTA 7mer-A1 dme-miR-283-5p 2R - 13495316 13495352 3'utr drk FlyBase G17359.1 AAAGCAGGCAATTGACAAGGTTTAGATATTAACTAAC 31 13495331 0.703441228 2 31 151 1 1.633468456 0.069767442 0.35483871 0.534883721 31 0 0 43 2R:13495316-13495352 7 34.5 945 FBgn0004638 2373.316667 149.8733333 229.7333333 0.014536619 0.230194386 0.150174115 3 3 3 0.15 dme-miR-980-3p 6mer3-8 GGCAGC 2R 13496891 13496896 - 2R_13496891_13496896_- 0.999999997 1 0.999999998 0 drk FBtr0087695|FBtr0087696|FBtr0087697|FBtr0087694|FBtr0087698 13496439|13495220|13495220|13496764|13495220 13496977|13496977|13496977|13496977|13496977 2R - 13496866 13496923 3'utr drk FlyBase G22889.1 AAACACAACACACACCCATAACGATTAGGCAGCATTATCAGCAATTGCGAATAACAAC 40 13496898 0.946402215 7 38 166 0.955555556 1.633468456 0.022222222 0.1 0.2 40 2 0 43 2R:13496866-13496923 6 drk FBtr0087694|FBtr0087698|FBtr0087696|FBtr0087697|FBtr0087695 13496764|13495220|13495220|13495220|13496439 13496977|13496977|13496977|13496977|13496977 GGCAGC 6mer3-8 dme-miR-980-3p 2R - 13496868 13496919 3'utr drk FlyBase G17366.1 ACAACACACACCCATAACGATTAGGCAGCATTATCAGCAATTGCGAATAACA 27 13496898 0.941129823 6 27 127 1 1.662757832 0.065217391 0.555555556 0.739130435 27 0 0 46 2R:13496868-13496919 6 29.5 946 FBgn0004638 2373.316667 149.8733333 229.7333333 0.012429863 0.196832881 0.12840975 2 2 2 0.15 dme-miR-92b-3p 8mer-m1 GTGCAATT 2R 13537672 13537679 - 2R_13537672_13537679_- 0.596698356 0.423718285 0.51020832 0.122315402 CG6145 FBtr0087685|FBtr0087687|FBtr0300193|FBtr0300192|FBtr0087686 13537369|13537369|13537369|13537369|13537369 13537761|13537761|13537761|13537761|13537761 2R - 13537649 13537815 stop_codon CG6145 FlyBase G22898.1 GGGTCGGAGGACACGCTCGATGACTTTGACAATCTTCAGATCTACGATGCGTAATGGCAGCCAAACCCAATCACTGTTTGTTAGCGTGGCCAATTAGACTAGTTGTAGTCGTAGTTTTTAGGGCTTGTGTGCTAGTGTGCAATTTGGTAGGCTTAATTATGTAGGAA 29 13537680 0.993499608 12 29 190 1 1.602059991 0.4 0.379310345 0.55 29 0 0 40 2R:13537649-13537815 8 CG6145 FBtr0087686|FBtr0300193|FBtr0300192|FBtr0087685|FBtr0087687 13537369|13537369|13537369|13537369|13537369 13537761|13537761|13537761|13537761|13537761 GTGCAATT 8mer-m1 dme-miR-92b-3p 2R - 13537658 13537723 3'utr CG6145 FlyBase G17375.1 ATTAGACTAGTTGTAGTCGTAGTTTTTAGGGCTTGTGTGCTAGTGTGCAATTTGGTAGGCTTAATT 9 13537689 0.981214508 6 9 74 1 1.113943352 0.230769231 0.444444444 0.615384615 9 0 0 13 2R:13537658-13537723 8 8.5 947 FBgn0033853 288.29 16.11333333 24.75 0.0294842 0.527513446 0.343434343 1 10 5.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 13555501 13555506 + 2R_13555501_13555506_+ 0.986073719 0.993091135 0.989582427 0.004962051 Roe1 FBtr0087675|FBtr0087675|FBtr0087675 13555286|13555286|13555286 13555606|13555606|13555606 2R + 13555473 13555526 3'utr Roe1 FlyBase G15633.1 TTAGAATTCCTCCTAGTTTCTAAGAGATCTGTGACTGGATTTGATGGCCACAAT 370 13555502 0.792228521 11 348 3113 0.950236967 1.700054386 0.05450237 0.127027027 0.234597156 370 14 7 401 2R:13555473-13555526 6 Roe1 FBtr0087675|FBtr0087675|FBtr0087675 13555286|13555286|13555286 13555606|13555606|13555606 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 13555441 13555573 3'utr Roe1 FlyBase G11858.1 ACAAACGCATCCTTCGGGCAAAGCTTGCGAATTTAGAATTCCTCCTAGTTTCTAAGAGATCTGTGACTGGATTTGATGGCCACAATTTGTACCATACGCGTGGCCATCGAGTGTTCCACTTTAAGGTTTAATT 228 13555502 0.804102875 19 214 1796 0.943786982 2.202760687 0.062130178 0.355263158 0.565088757 228 18 1 319 2R:13555441-13555573 6 285.5 948 FBgn0014877 286 33.49333333 51.28666667 0.998251748 8.524084395 5.566748993 -1 -1 -1 0.15 dme-miR-317-5p 7mer-A1 TATCCCA 2R 13580425 13580431 - 2R_13580425_13580431_- 0.823088051 0.817043309 0.82006568 0.004274319 CG6191 FBtr0330617 13580311 13580990 2R - 13580388 13580433 3'utr CG6191 FlyBase G22913.1 TATATCCCAAAATTACCTTCGTCCCTGATTCCTAGACTCCTAAGTG 23 13580408 0.666205762 6 23 187 1 1.414973348 0 0.130434783 0.230769231 23 0 0 26 2R:13580388-13580433 7 CG6191 FBtr0330617 13580311 13580990 TATCCCA 7mer-A1 dme-miR-317-5p 2R - 13580388 13580436 3'utr CG6191 FlyBase G17389.1 GAGTATATCCCAAAATTACCTTCGTCCCTGATTCCTAGACTCCTAAGTG 14 13580408 0.668228211 4 13 115 0.904761905 1.278753601 0.047619048 0.357142857 0.571428571 14 2 0 19 2R:13580388-13580436 7 10.5 949 FBgn0027581 566.66 18.94333333 29.07333333 0.01852963 0.554284709 0.361155698 -23 -23 -23 0.15 dme-miR-252-5p 7mer-m8 GTACTTA 2R 13580891 13580897 - 2R_13580891_13580897_- 0.58827329 0.588160605 0.588216948 7.97E-05 CG6191 FBtr0330617|FBtr0087678 13580311|13580584 13580990|13580990 2R - 13580885 13580924 stop_codon CG6191 FlyBase G22914.2 CGCAAGGGCAGTCGCAAGTAGGCGTTCGTACTTATAGCAT 34 13580900 0.775550217 7 24 205 0.789473684 1.176091259 0.210526316 0.117647059 0.210526316 34 7 1 30 2R:13580885-13580924 7 CG6191 FBtr0330617|FBtr0087678 13580311|13580584 13580990|13580990 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 13580868 13580922 stop_codon CG6191 FlyBase G17390.1 CAAGGGCAGTCGCAAGTAGGCGTTCGTACTTATAGCATACTTTCGGGTGTTGGGT 13 13580900 0.985075084 3 11 91 0.8 1.204119983 0 0.461538462 0.65 13 4 0 16 2R:13580868-13580922 7 22.5 950 FBgn0027581 566.66 18.94333333 29.07333333 0.039706349 1.187752947 0.773905068 3 3 3 0.15 dme-miR-932-5p 7mer-A1 GAATTGA 2R 13820064 13820070 - 2R_13820064_13820070_- 0.768930929 0.817979262 0.793455096 0.034682456 fl(2)d FBtr0304697|FBtr0304696|FBtr0087647|FBtr0087648 13819622|13819622|13819622|13819622 13820154|13820154|13820154|13820154 2R - 13820002 13820184 stop_codon fl(2)d FlyBase G22925.1 GGCAGCGGAGCAGTCGACTACTCCACCTAAGCGCTGGCGAACCTTTTTCCAAAAAAGGGTGCACTCCATATGAGTTCGTCAAATTGATCGTTAATTCCTGACGTTTACTTTTGTGAATTGAGATTTCAAAACAGAGAGAGACTTCATTTTATATTTCTAACCTATCTTTTAGATTCTTTAATT 65 13820067 0.982831166 25 62 470 0.95 1.579783597 0.325 0.215384615 0.3625 65 3 1 76 2R:13820002-13820184 7 fl(2)d FBtr0087647|FBtr0087648|FBtr0304697|FBtr0304696 13819622|13819622|13819622|13819622 13820154|13820154|13820154|13820154 GAATTGA 7mer-A1 dme-miR-932-5p 2R - 13820010 13820174 stop_codon fl(2)d FlyBase G17396.1 CAGTCGACTACTCCACCTAAGCGCTGGCGAACCTTTTTCCAAAAAAGGGTGCACTCCATATGAGTTCGTCAAATTGATCGTTAATTCCTGACGTTTACTTTTGTGAATTGAGATTTCAAAACAGAGAGAGACTTCATTTTATATTTCTAACCTATCTTTTAGATT 58 13820067 0.986484706 21 56 478 0.97826087 1.954242509 0.239130435 0.448275862 0.652173913 58 2 0 90 2R:13820010-13820174 7 29 951 FBgn0000662 1153.03 55.06666667 84.32666667 0.025151124 0.526634383 0.343900704 -3 -3 -3 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 2R 13825535 13825541 + 2R_13825535_13825541_+ 0.76986338 0.782895873 0.776379627 0.009215369 CG13339 FBtr0087632 13825430 13825572 2R + 13825511 13825549 3'utr CG13339 FlyBase G15651.1 TAAATATCTAATATTAGGGCTGTTGTACAAATATGTAAA 13 13825533 0.695330293 6 13 100 1 1.146128036 0.5 0.076923077 0.142857143 13 0 0 14 2R:13825511-13825549 7 CG13339 FBtr0087632 13825430 13825572 GTACAAA 7mer-A1 dme-miR-305-5p 2R + 13825516 13825550 3'utr CG13339 FlyBase G11870.1 ATCTAATATTAGGGCTGTTGTACAAATATGTAAAT 15 13825533 0.622546621 6 15 98 1 1.462397998 0.724137931 0.6 0.793103448 15 0 0 29 2R:13825516-13825550 7 14 952 FBgn0033871 109.33 21.32666667 32.49 0.128052685 0.656455142 0.430901816 2 2 2 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 13863458 13863463 + 2R_13863458_13863463_+ 0.841517116 0.558444037 0.699980577 0.200162909 CG13344 FBtr0087586|FBtr0087586|FBtr0087586|FBtr0339953|FBtr0339953|FBtr0339953 13863344|13863344|13863344|13863344|13863344|13863344 13864156|13864156|13864156|13863579|13863579|13863579 2R + 13863433 13863491 3'utr CG13344 FlyBase G15662.1 AGGTTTAGTTTTATGAGGCGCACTTCTGTGACTTTGTTTGTGTTCGTACGTTCGTATAT 54 13863467 0.814667431 10 53 463 0.984375 1.799340549 0.3125 0.166666667 0.296875 54 1 0 63 2R:13863433-13863491 6 CG13344 FBtr0339953|FBtr0339953|FBtr0339953|FBtr0087586|FBtr0087586|FBtr0087586 13863344|13863344|13863344|13863344|13863344|13863344 13863579|13863579|13863579|13864156|13864156|13864156 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 13863439 13863489 3'utr CG13344 FlyBase G11878.1 AGTTTTATGAGGCGCACTTCTGTGACTTTGTTTGTGTTCGTACGTTCGTAT 37 13863467 0.615195605 9 33 319 0.886792453 1.194976603 0.339622642 0.378378378 0.566037736 37 4 2 47 2R:13863439-13863489 6 39.5 953 FBgn0033884 128.6733333 8.203333333 12.55333333 0.306978913 4.815115807 3.146574615 -9 -9 -9 0.15 dme-miR-980-3p 6mer3-8 GGCAGC 2R 13863699 13863704 + 2R_13863699_13863704_+ 0.968679058 0.970496491 0.969587774 0.001285096 CG13344 FBtr0087586 13863344 13864156 2R + 13863682 13863716 3'utr CG13344 FlyBase G15664.1 ATTTAGGAGCACCAACTGGCAGCGCTGGCGTTGAC 10 13863698 0.947115154 2 10 21 1 1.041392685 0.363636364 0.1 0.181818182 10 0 0 11 2R:13863682-13863716 6 CG13344 FBtr0087586 13863344 13864156 GGCAGC 6mer3-8 dme-miR-980-3p 2R + 13863667 13863716 3'utr CG13344 FlyBase G11880.1 AGAGCAGCAGCATGTATTTAGGAGCACCAACTGGCAGCGCTGGCGTTGAC 7 13863698 0.999181601 2 6 22 1 1.041392685 0.363636364 0.571428571 0.727272727 7 0 0 11 2R:13863667-13863716 6 8 954 FBgn0033884 128.6733333 8.203333333 12.55333333 0.062172944 0.975213328 0.637280935 1 1 1 0.15 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2R 13863903 13863910 + 2R_13863903_13863910_+ 0.63101947 0.631037499 0.631028485 1.27E-05 CG13344 FBtr0087586 13863344 13864156 2R + 13863815 13863940 3'utr CG13344 FlyBase G15665.1 AACCCCCTCTGGCAGCCCATAGCACAAAGAAACGTATGAACCCAGCTTGTACTTGAGTTAGTTGGATGATTAAAGTTGAAGCGGCATTTCTAGTCAGTAAATGGTGGTCAGAATAGAGGGAACGTA 137 13863902 0.977503484 11 134 886 0.9625 2.187520721 0.0875 0.145985401 0.26875 137 6 0 154 2R:13863815-13863940 8 CG13344 FBtr0087586 13863344 13864156 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R + 13863886 13863980 3'utr CG13344 FlyBase G11881.1 AAAGTTGAAGCGGCATTTCTAGTCAGTAAATGGTGGTCAGAATAGAGGGAACGTAGAAGGAGGAGGAGGAGGAGGAGTAACCCCGATACAGGGCA 70 13863902 0.972006182 8 66 393 0.97 1.685741739 0.2 0.371428571 0.56 70 2 1 97 2R:13863886-13863980 8 97 955 FBgn0033884 128.6733333 8.203333333 12.55333333 0.753846951 11.8244616 7.727031333 1 1 1 0.15 dme-bantam-3p 6mer3-8 TGATCT 2R 13943680 13943685 - 2R_13943680_13943685_- 0.947064113 0.950628305 0.948846209 0.00252027 AGO1 FBtr0305592 13943385 13947971 2R - 13943618 13943697 3'utr AGO1 FlyBase G23018.1 AATGAAAGTTGATGATCTTTTCGATATAATTCTGTCAAGCTGTCTTAACAATTAGTTATAAGCGCTTCAATACAAGAAAC 20 13943678 0.855237785 8 20 165 1 1.414973348 0.115384615 0.15 0.346153846 20 0 0 26 2R:13943618-13943697 6 AGO1 FBtr0305592 13943385 13947971 TGATCT 6mer3-8 dme-bantam-3p 2R - 13943619 13943727 3'utr AGO1 FlyBase G17447.1 CAAAATGCGAGTTTGTGAAATATGCAATTTAATGAAAGTTGATGATCTTTTCGATATAATTCTGTCAAGCTGTCTTAACAATTAGTTATAAGCGCTTCAATACAAGAAA 16 13943679 0.985238221 7 14 124 0.923076923 1.380211242 0.192307692 0.3125 0.576923077 16 2 0 24 2R:13943619-13943727 6 10.5 956 FBgn0262739 6339.806667 111.4333333 171.8633333 0.001656202 0.094226742 0.061095056 -7 -6 -6.5 0.15 dme-bantam-3p 6mer3-8 TGATCT 2R 13943883 13943888 - 2R_13943883_13943888_- 0.999999999 0.999964965 0.999982482 2.47E-05 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 2R - 13943866 13943930 3'utr AGO1 FlyBase G23020.1 AAGCAACGTGAGCAACGTAATATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGT 37 13943890 0.86445956 12 34 389 0.886363636 1.591064607 0.159090909 0.162162162 0.295454545 37 5 0 39 2R:13943866-13943930 6 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 TGATCT 6mer3-8 dme-bantam-3p 2R - 13943864 13943921 3'utr AGO1 FlyBase G17448.1 GAGCAACGTAATATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTAA 27 13943890 0.987717694 10 26 285 0.975 1.591064607 0.25 0.296296296 0.525 27 1 0 39 2R:13943864-13943921 6 29 957 FBgn0262739 6339.806667 111.4333333 171.8633333 0.004574272 0.260245289 0.168738727 2 2 2 0.15 dme-miR-305-3p 8mer-m1 ATGTGCCG 2R 13944588 13944595 - 2R_13944588_13944595_- 0.628735565 0.628733823 0.628734694 1.27E-06 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 2R - 13944563 13944608 3'utr AGO1 FlyBase G23026.1 ATATTACTTATAAATGTGCCGTTTATAGATGTCTACAATTATATAC 17 13944593 0.738681045 6 16 164 1 1.255272505 0 0.058823529 0.111111111 17 0 0 18 2R:13944563-13944608 8 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 ATGTGCCG 8mer-m1 dme-miR-305-3p 2R - 13944560 13944605 3'utr AGO1 FlyBase G17453.1 TTACTTATAAATGTGCCGTTTATAGATGTCTACAATTATATACAAC 6 13944584 0.982702537 4 6 52 1 1 0.3 0.5 0.7 6 0 0 10 2R:13944560-13944605 8 9.5 958 FBgn0262739 6339.806667 111.4333333 171.8633333 0.001498468 0.085252767 0.055276479 -2 -11 -6.5 0.15 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 13944733 13944739 - 2R_13944733_13944739_- 0.802096307 0.801706193 0.80190125 0.000275842 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 2R - 13944714 13944832 3'utr AGO1 FlyBase G23027.1 TATGTTCTGCTCAGAGGCAAGGCCCAAATAAAAAGACAAAAAGCCGGGATATCCAAATGGGAACTTACATTTTTATCTGTCAAAATTCAATTGAGCTTTAAACTAAAGATAGATCGAGA 158 13944741 0.976271152 12 150 963 0.945054945 2.235528447 0.027472527 0.120253165 0.236263736 158 10 0 172 2R:13944714-13944832 7 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 AGCTTTA 7mer-A1 dme-miR-79-3p 2R - 13944708 13944758 3'utr AGO1 FlyBase G17454.1 ATCTGTCAAAATTCAATTGAGCTTTAAACTAAAGATAGATCGAGAAAAAAC 52 13944741 0.805553155 3 49 371 0.927536232 1.806179974 0 0.288461538 0.463768116 52 5 0 64 2R:13944708-13944758 7 79.5 959 FBgn0262739 6339.806667 111.4333333 171.8633333 0.012539815 0.71343105 0.462576854 2 2 2 0.15 dme-miR-33-5p 6mer2-7 AATGCA 2R 13945225 13945230 - 2R_13945225_13945230_- 0.974615878 0.96760767 0.971111774 0.004955546 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 2R - 13945180 13945275 3'utr AGO1 FlyBase G23029.1 ATATTCACTTAGTTTAAGCTGAAGCTGAAATGTGTGCCGACAATGAATGCATCTCGTAGTTGTAAAATGAGCGAAATATTCAACAATAATTTACTT 414 13945228 0.983198604 15 401 3155 0.974248927 2.356025857 0.278969957 0.111111111 0.210300429 414 11 1 454 2R:13945180-13945275 6 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 AATGCA 6mer2-7 dme-miR-33-5p 2R - 13945201 13945340 3'utr AGO1 FlyBase G17457.1 AAAGGAGTTCGCGATTCGGGGCTCGATTTTTGAGATCGGCCAGAAAGAACCAACATTTACATTATATATTCACTTAGTTTAAGCTGAAGCTGAAATGTGTGCCGACAATGAATGCATCTCGTAGTTGTAAAATGAGCGAA 180 13945228 0.983135224 15 171 1306 0.954385965 2.133538908 0.242105263 0.388888889 0.614035088 180 12 1 272 2R:13945201-13945340 6 276.5 960 FBgn0262739 6339.806667 111.4333333 171.8633333 0.043613317 2.481304218 1.608836479 -2 -2 -2 0.15 dme-miR-1003-3p 7mer-m8 ATGTGAG 2R 13946084 13946090 - 2R_13946084_13946090_- 0.671793725 0.671793485 0.671793605 1.41E-07 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 2R - 13945974 13946162 3'utr AGO1 FlyBase G23034.1 CATCCTTCTTCACAGAACCTTTAATTTAGATTTAGTTTCCAAGTTTGCAAGCTGTTTTGCCAATCGTACATTATGTGAGCATTATAAAATACATAATATATATAAATCTATATGCTTATATTTAATCATTTACTGCACTTACAAATTAGTTGGTAATCCTCAAGAATATATGTATAAAGAAAAAAAGGG 88 13946090 0.940822388 37 76 698 0.900990099 1.356981401 0.108910891 0.125 0.237623762 88 7 3 91 2R:13945974-13946162 7 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 ATGTGAG 7mer-m8 dme-miR-1003-3p 2R - 13945981 13946170 3'utr AGO1 FlyBase G17459.1 ATTGTATACATCCTTCTTCACAGAACCTTTAATTTAGATTTAGTTTCCAAGTTTGCAAGCTGTTTTGCCAATCGTACATTATGTGAGCATTATAAAATACATAATATATATAAATCTATATGCTTATATTTAATCATTTACTGCACTTACAAATTAGTTGGTAATCCTCAAGAATATATGTATAAAGAAA 62 13946106 0.984202686 24 56 504 0.904255319 1.452297671 0.042553191 0.338709677 0.563829787 62 7 2 85 2R:13945981-13946170 7 19 961 FBgn0262739 6339.806667 111.4333333 171.8633333 0.002996937 0.170505534 0.110552959 0 16 8 0.15 dme-miR-999-3p 8mer-A1 AGTTAACA 2R 13946251 13946258 - 2R_13946251_13946258_- 0.643832267 0.643926235 0.643879251 6.64E-05 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 2R - 13946182 13946304 3'utr AGO1 FlyBase G23034.2 ATGAAACGTATGCTTAGTAATTGTACTATATCGAGGACACAGTTCAAGTTAACATTATAATGAGTTGTTATTTATGCGGCGCGGGCGACGACGTTCTATCCACTCGGAATCGCCCGGGCCAAA 56 13946257 0.870147467 19 48 301 0.919354839 1.755874856 0.290322581 0.071428571 0.161290323 56 5 0 57 2R:13946182-13946304 8 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 AGTTAACA 8mer-A1 dme-miR-999-3p 2R - 13946214 13946293 3'utr AGO1 FlyBase G17460.1 GCTTAGTAATTGTACTATATCGAGGACACAGTTCAAGTTAACATTATAATGAGTTGTTATTTATGCGGCGCGGGCGACGA 39 13946255 0.98507182 11 29 236 0.745454545 0.913813852 0.418181818 0.358974359 0.545454545 39 10 4 41 2R:13946214-13946293 8 26 962 FBgn0262739 6339.806667 111.4333333 171.8633333 0.004101071 0.233323362 0.151282996 -1 -3 -2 0.15 dme-miR-283-5p 8mer-m1 TGATATTT 2R 13946734 13946741 - 2R_13946734_13946741_- 0.5522745 0.54934431 0.550809405 0.002071964 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 2R - 13946560 13946840 3'utr AGO1 FlyBase G23036.1 GAAACGATAACCAAGCGGATGGAGCTGTTGTAACAATGTAGATTACTTAAATTCAAAAGTGCAAATAACACGGTAGCAGACACGTTACGTTGGCAGTGCTGATATTTTATGTTAGTCCTTAGTTTACCCTCTTTTATGCACCACACCACCACACAATCAGACTCCGAACTTCTTCAACCCTCCTCGAGTCCAAGGCATATCACTCAATGTCCTCTTATTTATGTACCTCCTACAATAAGCCTTATGATATATTTAGTTGTACCTTATATATATATATATAT 345 13946744 0.942663734 53 306 2742 0.898383372 1.744851561 0.113163972 0.208695652 0.369515012 345 38 6 389 2R:13946560-13946840 8 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 TGATATTT 8mer-m1 dme-miR-283-5p 2R - 13946724 13946835 3'utr AGO1 FlyBase G17461.3 GATAACCAAGCGGATGGAGCTGTTGTAACAATGTAGATTACTTAAATTCAAAAGTGCAAATAACACGGTAGCAGACACGTTACGTTGGCAGTGCTGATATTTTATGTTAGTC 142 13946744 0.986197784 19 113 1058 0.795454545 1.765916794 0.195454545 0.408450704 0.618181818 142 43 2 175 2R:13946724-13946835 8 144.5 963 FBgn0262739 6339.806667 111.4333333 171.8633333 0.022792493 1.296739456 0.840784344 3 3 3 0.15 dme-miR-988-3p 8mer-A1 ACAAGGGA 2R 13946936 13946943 - 2R_13946936_13946943_- 0.601837943 0.608536332 0.605187138 0.004736484 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 2R - 13946860 13947264 3'utr AGO1 FlyBase G23037.1 ACAGCAAACACCACATGAACACCAACCACTCGGATTCTCTGTACTGTGAACGAAGACCACCACCAAAATATAAACAAAAACCACAAGCGACATTAAAGCGACAAGCATTGAAAGAGTGTGTAGACACAACTTAGCATGTACTAATGAATTACTTCAATACTTCAACTAGGGCGCTGACAAAACCAAGCAAGAACATTTAATAGTTTGTAAGTTGGGCTCTACCAAAAACCGAACACAAAATGAGAGAGAGAGAGAGAGAGAAAAATGCAAGCAAGGCCAGATAAGTTAAGTGGGCAATGAATAACGAGAACTGCAATTTCAACAAGGGACAAACTTTTGGTCAAAACAATAGCTATACTTATAGAGCAGAGCCTAATATATACATACATAATTAGAATCTAAAAC 268 13946947 0.999995042 55 250 1217 0.938110749 1.681241237 0.182410423 0.130597015 0.241042345 268 14 5 288 2R:13946860-13947264 8 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 ACAAGGGA 8mer-A1 dme-miR-988-3p 2R - 13946845 13947073 3'utr AGO1 FlyBase G17462.1 AACATTTAATAGTTTGTAAGTTGGGCTCTACCAAAAACCGAACACAAAATGAGAGAGAGAGAGAGAGAGAAAAATGCAAGCAAGGCCAGATAAGTTAAGTGGGCAATGAATAACGAGAACTGCAATTTCAACAAGGGACAAACTTTTGGTCAAAACAATAGCTATACTTATAGAGCAGAGCCTAATATATACATACATAATTAGAATCTAAAACTAAAATTTAAAGTTT 142 13946947 0.947976752 26 132 504 0.932126697 1.614897216 0.221719457 0.401408451 0.615384615 142 11 4 206 2R:13946845-13947073 8 56 964 FBgn0262739 6339.806667 111.4333333 171.8633333 0.008833077 0.502542626 0.325840299 4 4 4 0.15 dme-miR-14-3p 6mer3-8 AAGACT 2R 13973086 13973091 - 2R_13973086_13973091_- 0.574502857 0.710753825 0.642628341 0.096343935 CG6701 FBtr0339957|FBtr0303991|FBtr0303990|FBtr0303989 13972982|13972982|13972982|13972982 13973652|13973652|13973652|13973652 2R - 13973033 13973129 3'utr CG6701 FlyBase G23078.1 AAGTAAAAACTTGCTGACTCCTTGTGTCATCGGTTCTGAAGACTTGAAACAATTTGACAATGTAGAAAACAATATGTATATGCCCGACAAACTATTT 24 13973093 0.975000055 11 23 150 1 1.505149978 0.15625 0.291666667 0.46875 24 0 0 32 2R:13973033-13973129 6 CG6701 FBtr0303990|FBtr0303989|FBtr0339957|FBtr0303991 13972982|13972982|13972982|13972982 13973652|13973652|13973652|13973652 AAGACT 6mer3-8 dme-miR-14-3p 2R - 13973080 13973107 3'utr CG6701 FlyBase G17496.1 TGTGTCATCGGTTCTGAAGACTTGAAAC 5 13973093 0.794693685 2 5 35 1 0.84509804 0.428571429 0.4 0.571428571 5 0 0 7 2R:13973080-13973107 6 10 965 FBgn0033889 5221.26 120.4433333 183.47 0.001915247 0.083026596 0.054504824 2 2 2 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 2R 13973565 13973570 - 2R_13973565_13973570_- 0.546258768 0.534759609 0.540509188 0.008131162 CG6701 FBtr0339957|FBtr0303991|FBtr0303990|FBtr0303989 13972982|13972982|13972982|13972982 13973652|13973652|13973652|13973652 2R - 13973514 13973623 3'utr CG6701 FlyBase G23080.1 CTATAGGGACAACGTGATTGCTTGGCCGAACAAGTGATCTCGCTGTCCTCTTTTTGACTTTGCTATTGGCATTTGTGCGATCTGCGATCATCCATGCGCCAAGTAGCAAA 35 13973589 0.985100945 13 33 265 0.930232558 1.602059991 0.139534884 0.228571429 0.372093023 35 3 0 40 2R:13973514-13973623 6 CG6701 FBtr0303990|FBtr0303989|FBtr0339957|FBtr0303991 13972982|13972982|13972982|13972982 13973652|13973652|13973652|13973652 TTGACT 6mer3-8 dme-miR-1012-3p 2R - 13973552 13973622 3'utr CG6701 FlyBase G17500.1 TATAGGGACAACGTGATTGCTTGGCCGAACAAGTGATCTCGCTGTCCTCTTTTTGACTTTGCTATTGGCAT 22 13973563 0.874786682 6 19 149 0.870967742 1.431363764 0.032258065 0.318181818 0.516129032 22 4 0 27 2R:13973552-13973622 6 8.5 966 FBgn0033889 5221.26 120.4433333 183.47 0.00162796 0.070572607 0.0463291 19 -7 6 0.15 dme-miR-33-5p 7mer-A1 AATGCAA 2R 13985083 13985089 - 2R_13985083_13985089_- 0.782911758 0.782911822 0.78291179 0 RN-tre FBtr0087603|FBtr0330626|FBtr0330627 13984813|13984813|13984813 13985779|13985779|13985596 2R - 13985051 13985134 3'utr RN-tre FlyBase G23115.1 GTACCAAACAAAATACAAAGCAACGTTAAAAAGTTACGTCCATGAAATGCAAACGAATGTAAAGGCGAAAGGCAACCAAATATT 45 13985101 0.960432982 8 42 207 0.941176471 1.681241237 0.176470588 0.133333333 0.235294118 45 3 0 48 2R:13985051-13985134 7 RN-tre FBtr0330626|FBtr0330627|FBtr0087603 13984813|13984813|13984813 13985779|13985596|13985779 AATGCAA 7mer-A1 dme-miR-33-5p 2R - 13985031 13985121 3'utr RN-tre FlyBase G17524.1 TACAAAGCAACGTTAAAAAGTTACGTCCATGAAATGCAAACGAATGTAAAGGCGAAAGGCAACCAAATATTAATTGAAAACTATAGATAAC 35 13985101 0.957442506 7 35 166 1 1.748188027 0.25 0.514285714 0.696428571 35 0 0 56 2R:13985031-13985121 7 29 967 FBgn0020620 1475.656667 67.63 103.75 0.019652268 0.428803785 0.279518072 12 12 12 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 13986572 13986579 - 2R_13986572_13986579_- 0.504691335 0.448152454 0.476421895 0.039978969 RN-tre FBtr0087605 13986424 13987040 2R - 13986531 13986622 3'utr RN-tre FlyBase G23118.1 TACTAGCATAAACCAACTGATTAGGTAACTTAAGCTTTGCTCTTGCATTTACTTTATATTTGCATTACAAACAAAACTCAACTTTTAGTTTA 24 13986580 0.869135622 11 24 204 1 1.462397998 0.068965517 0.208333333 0.344827586 24 0 0 29 2R:13986531-13986622 8 RN-tre FBtr0087605 13986424 13987040 TGCATTTA 8mer-A1 dme-miR-277-3p 2R - 13986566 13986621 3'utr RN-tre FlyBase G17529.1 ACTAGCATAAACCAACTGATTAGGTAACTTAAGCTTTGCTCTTGCATTTACTTTAT 23 13986580 0.952413798 6 21 211 0.896551724 1.414973348 0.103448276 0.260869565 0.413793103 23 3 0 26 2R:13986566-13986621 8 13.5 968 FBgn0020620 1475.656667 67.63 103.75 0.009148469 0.199615555 0.130120482 1 1 1 0.15 dme-miR-252-5p 8mer-m1 GTACTTAG 2R 13986882 13986889 - 2R_13986882_13986889_- 0.626690286 0.632297362 0.629493824 0.003964818 RN-tre FBtr0087605 13986424 13987040 2R - 13986850 13986910 3'utr RN-tre FlyBase G23120.1 ATTCGGTAGTAATATCCACATGTACTTAGCTTTAATTTTTGTATTGTCGAACCGACAGAAA 13 13986889 0.989089527 4 13 123 1 1.255272505 0 0.230769231 0.444444444 13 0 0 18 2R:13986850-13986910 8 RN-tre FBtr0087605 13986424 13987040 GTACTTAG 8mer-m1 dme-miR-252-5p 2R - 13986843 13986909 3'utr RN-tre FlyBase G17530.1 TTCGGTAGTAATATCCACATGTACTTAGCTTTAATTTTTGTATTGTCGAACCGACAGAAACCTGAAA 10 13986890 0.98649581 3 10 90 1 1.176091259 0 0.4 0.6 10 0 0 15 2R:13986843-13986909 8 11 969 FBgn0020620 1475.656667 67.63 103.75 0.007454308 0.162649712 0.106024096 0 1 0.5 0.15 dme-miR-276a-3p 6mer2-7 GTTCCT 2R 14058116 14058121 + 2R_14058116_14058121_+ 0.954654402 0.947297536 0.950975969 0.005202114 mam FBtr0339956|FBtr0087597|FBtr0087596 14057913|14057913|14057913 14060356|14060356|14058697 2R + 14058088 14058134 3'utr mam FlyBase G15704.1 AACCGCCCCACACGGCCCCGCCCCCCTTGTTCCTGCCAACGAAGTTA 61 14058117 0.958972264 5 60 246 1 1.819543936 0.303030303 0.066666667 0.151515152 60 0 0 66 2R:14058088-14058134 6 mam FBtr0087596|FBtr0339956|FBtr0087597 14057913|14057913|14057913 14058697|14060356|14060356 GTTCCT 6mer2-7 dme-miR-276a-3p 2R + 14058091 14058135 3'utr mam FlyBase G11911.1 CGCCCCACACGGCCCCGCCCCCCTTGTTCCTGCCAACGAAGTTAT 29 14058117 0.947479265 3 28 121 0.975609756 1.301029996 0.292682927 0.275862069 0.487804878 29 0 1 40 2R:14058091-14058135 6 44.5 970 FBgn0002643 1627.19 27.33666667 41.79333333 0.027347759 1.627850262 1.06476312 -1 -1 -1 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 14058480 14058487 + 2R_14058480_14058487_+ 0.500065084 0.500072057 0.500068571 4.95E-06 mam FBtr0339956|FBtr0087597|FBtr0087596 14057913|14057913|14057913 14060356|14060356|14058697 2R + 14058442 14058492 3'utr mam FlyBase G15706.1 TACAGATACTACAGACTCGTTGTGCAACTTAAGCACTTGTACTTAATGCAA 12 14058479 0.982339257 4 12 91 1 1.079181246 0.083333333 0 0 12 0 0 12 2R:14058442-14058492 8 mam FBtr0087596|FBtr0339956|FBtr0087597 14057913|14057913|14057913 14058697|14060356|14060356 GTACTTAA 8mer-A1 dme-miR-252-5p 2R + 14058442 14058492 3'utr mam FlyBase G11914.1 TACAGATACTACAGACTCGTTGTGCAACTTAAGCACTTGTACTTAATGCAA 7 14058479 0.980313255 3 7 52 1 1 0 0.285714286 0.5 7 0 0 10 2R:14058442-14058492 8 8 971 FBgn0002643 1627.19 27.33666667 41.79333333 0.004916451 0.292647238 0.191418089 1 1 1 0.15 dme-miR-283-5p 8mer-m1 TGATATTT 2R 14058781 14058788 + 2R_14058781_14058788_+ 0.483380454 0.539532617 0.511456535 0.039705531 mam FBtr0339956|FBtr0087597 14057913|14057913 14060356|14060356 2R + 14058731 14058801 stop_codon mam FlyBase G15707.1 AATGGGAAAACAGATCGAGAAACTTTCAGAATAAAGAGCAAAAATATTGGTGATATTTTAAATGCTTAAAC 141 14058777 0.984709609 5 139 1113 0.987804878 2.209515015 0.012195122 0.14893617 0.268292683 141 2 0 162 2R:14058731-14058801 8 mam FBtr0339956|FBtr0087597 14057913|14057913 14060356|14060356 TGATATTT 8mer-m1 dme-miR-283-5p 2R + 14058741 14058801 stop_codon mam FlyBase G11915.1 CAGATCGAGAAACTTTCAGAATAAAGAGCAAAAATATTGGTGATATTTTAAATGCTTAAAC 91 14058777 0.961627573 8 90 719 0.991304348 2.056904851 0 0.230769231 0.391304348 91 1 0 114 2R:14058741-14058801 8 113.5 972 FBgn0002643 1627.19 27.33666667 41.79333333 0.069752149 4.151932691 2.715744138 4 4 4 0.15 dme-miR-33-5p 7mer-A1 AATGCAA 2R 14060560 14060566 - 2R_14060560_14060566_- 0.782397823 0.782900868 0.782649345 0.000355745 Prosap FBtr0339764 14060454 14062325 2R - 14060499 14060593 3'utr Prosap FlyBase G23139.1 AGCACACACCACCACACATACACTTTAAATGCAAGTATTTCAAATGGAATAATACGGAAATATATATCATAAGTCGTAAAATATGCAATTATGTA 11 14060575 0.974862043 8 11 61 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 2R:14060499-14060593 7 Prosap FBtr0339764 14060454 14062325 AATGCAA 7mer-A1 dme-miR-33-5p 2R - 14060535 14060578 3'utr Prosap FlyBase G17542.1 ACATACACTTTAAATGCAAGTATTTCAAATGGAATAATACGGAA 5 14060568 0.966030999 3 5 27 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2R:14060535-14060578 7 4.5 973 FBgn0040752 4396.62 61.27 94.33 0.001023514 0.073445406 0.047704866 9 2 5.5 0.15 dme-miR-12-5p 6mer2-7 ATACTC 2R 14060911 14060916 - 2R_14060911_14060916_- 0.999977707 0.997015552 0.998496629 0.002094521 Prosap FBtr0339764 14060454 14062325 2R - 14060860 14060930 3'utr Prosap FlyBase G23141.1 CGAGAATATATTGGATACTCTAGCGTATAACTAGATTTTAGCACACTTTTTAGTTCTCGCAATAGTTGCTA 12 14060920 0.633801613 7 11 99 0.923076923 1.079181246 0.076923077 0.083333333 0.153846154 12 1 0 12 2R:14060860-14060930 6 Prosap FBtr0339764 14060454 14062325 ATACTC 6mer2-7 dme-miR-12-5p 2R - 14060847 14060930 3'utr Prosap FlyBase G17544.1 CGAGAATATATTGGATACTCTAGCGTATAACTAGATTTTAGCACACTTTTTAGTTCTCGCAATAGTTGCTAATTATTTGTAAAT 19 14060920 0.787895924 9 17 143 0.958333333 1.361727836 0.5 0.263157895 0.416666667 19 1 0 23 2R:14060847-14060930 6 8.5 974 FBgn0040752 4396.62 61.27 94.33 0.001933303 0.138730211 0.090109191 4 4 4 0.15 dme-miR-1006-3p 7mer-m8 CGAATTT 2R 14061620 14061626 - 2R_14061620_14061626_- 0.456903727 0.57013903 0.513521379 0.080069448 Prosap FBtr0339765|FBtr0339763|FBtr0087601|FBtr0339764 14061497|14061497|14061497|14060454 14062325|14062325|14062325|14062325 2R - 14061595 14061630 3'utr Prosap FlyBase G23146.1 TAGCCGAATTTCCAGTCAAGTCAAGTCAACTAAACT 5 14061621 0.965974023 2 5 27 1 0.84509804 0 0.2 0.428571429 5 0 0 7 2R:14061595-14061630 7 Prosap FBtr0087601|FBtr0339764|FBtr0339765|FBtr0339763 14061497|14060454|14061497|14061497 14062325|14062325|14062325|14062325 CGAATTT 7mer-m8 dme-miR-1006-3p 2R - 14061595 14061636 3'utr Prosap FlyBase G17548.1 AGCATTTAGCCGAATTTCCAGTCAAGTCAAGTCAACTAAACT 8 14061621 0.962460402 2 7 38 1 1.079181246 0 0.5 0.666666667 8 0 0 12 2R:14061595-14061636 7 6 975 FBgn0040752 4396.62 61.27 94.33 0.001364685 0.097927207 0.063606488 -5 -5 -5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 14062073 14062079 - 2R_14062073_14062079_- 0.78614858 0.775952313 0.781050446 0.007209873 Prosap FBtr0339765|FBtr0339765|FBtr0339765|FBtr0339763|FBtr0339763|FBtr0339763|FBtr0087601|FBtr0087601|FBtr0087601|FBtr0339764|FBtr0339764|FBtr0339764 14061497|14061497|14061497|14061497|14061497|14061497|14061497|14061497|14061497|14060454|14060454|14060454 14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325 2R - 14062041 14062100 3'utr Prosap FlyBase G23151.1 ACTTTTATTATATTTATTGCGTGTGATATAAATTTATGCAAGCTGCCCGCGAGCAGCAAC 131 14062086 0.992824521 11 122 1457 0.91875 1.565257343 0.05 0.20610687 0.35 131 10 3 147 2R:14062041-14062100 7 Prosap FBtr0087601|FBtr0087601|FBtr0087601|FBtr0339764|FBtr0339764|FBtr0339764|FBtr0339765|FBtr0339765|FBtr0339765|FBtr0339763|FBtr0339763|FBtr0339763 14061497|14061497|14061497|14060454|14060454|14060454|14061497|14061497|14061497|14061497|14061497|14061497 14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 14062040 14062135 3'utr Prosap FlyBase G17553.1 GAATTAGAATTTTCTTGATTTCGAAATCTTAAGTTACTTTTATTATATTTATTGCGTGTGATATAAATTTATGCAAGCTGCCCGCGAGCAGCAACT 95 14062086 0.992747966 14 87 1022 0.905109489 2.093421685 0.051094891 0.336842105 0.540145985 95 13 0 124 2R:14062040-14062135 7 105 976 FBgn0040752 4396.62 61.27 94.33 0.023881982 1.71372613 1.113113538 7 7 7 0.15 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 14166705 14166712 + 2R_14166705_14166712_+ 0.605653355 0.605571381 0.605612368 5.80E-05 CG8323 FBtr0087521 14166669 14166991 2R + 14166653 14166715 stop_codon CG8323 FlyBase G15738.1 AAGTATAGTAATCAATGACCCCAAAGATCACTGGCTAGGTAGCATTAATTTAAGTACAAAATT 5 14166702 0.987759734 4 5 34 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2R:14166653-14166715 8 CG8323 FBtr0087521 14166669 14166991 AGTACAAA 8mer-A1 dme-miR-305-5p 2R + 14166675 14166718 3'utr CG8323 FlyBase G11935.1 AAAGATCACTGGCTAGGTAGCATTAATTTAAGTACAAAATTGTT 6 14166702 0.984168723 3 6 53 1 0.954242509 0 0.5 0.666666667 6 0 0 9 2R:14166675-14166718 8 4 977 FBgn0033903 176.6666667 14.75333333 22.46333333 0.022641509 0.271125169 0.178067963 3 3 3 0.15 dme-miR-305-3p 6mer2-7 TGTGCC 2R 14166907 14166912 + 2R_14166907_14166912_+ 0.993871663 0.995219282 0.994545472 0.000952897 CG8323 FBtr0087521 14166669 14166991 2R + 14166895 14166950 3'utr CG8323 FlyBase G15741.1 CCAGAACCAACTTGTGCCTTCATTAAGCTAATTTAAGAGCTCTTCCTGTAGCCATT 23 14166907 0.847413638 7 22 172 0.961538462 1.096910013 0.038461538 0.130434783 0.230769231 23 0 1 25 2R:14166895-14166950 6 CG8323 FBtr0087521 14166669 14166991 TGTGCC 6mer2-7 dme-miR-305-3p 2R + 14166859 14166948 3'utr CG8323 FlyBase G11936.1 AATGTCCTAGTTCCAATCTCTTAGATTAGCAAAGCCCCAGAACCAACTTGTGCCTTCATTAAGCTAATTTAAGAGCTCTTCCTGTAGCCA 20 14166907 0.822705524 7 17 146 0.931034483 1.130333768 0.172413793 0.35 0.551724138 20 1 1 27 2R:14166859-14166948 6 12.5 978 FBgn0033903 176.6666667 14.75333333 22.46333333 0.070754717 0.847266155 0.556462383 0 0 0 0.15 dme-miR-13b-2-5p 7mer-A1 TTGACGA 2R 14181915 14181921 + 2R_14181915_14181921_+ 0.777683223 0.782903463 0.780293343 0.00369131 cg FBtr0339961|FBtr0290035|FBtr0112795|FBtr0346946 14181377|14181377|14180447|14180447 14182838|14182838|14182838|14182838 2R + 14181876 14181959 3'utr cg FlyBase G15768.1 ATGCCTAAGTGTAAACTGTATACATATTAACATGAAACATTGACGACTACGGATAGTACTAGACACTAGCATGCGTTGCACTTG 23 14181935 0.971449635 9 21 124 0.92 1.06069784 0.28 0.086956522 0.16 23 1 1 23 2R:14181876-14181959 7 cg FBtr0112795|FBtr0346946|FBtr0339961|FBtr0290035 14180447|14180447|14181377|14181377 14182838|14182838|14182838|14182838 TTGACGA 7mer-A1 dme-miR-13b-2-5p 2R + 14181783 14181958 3'utr cg FlyBase G11959.1 TAAAGCGTTACGTTCAATTGGTTTTACGCATTACACGATTTTTAATAACACAACTTATACACAAACTTATATTCAAATAGACGAAAAATATTTATGCCTAAGTGTAAACTGTATACATATTAACATGAAACATTGACGACTACGGATAGTACTAGACACTAGCATGCGTTGCACTT 25 14181934 0.972757612 14 23 149 0.925 1.091080469 0.275 0.44 0.65 25 1 2 37 2R:14181783-14181958 7 9.5 979 FBgn0000289 2715.146667 76.72333333 117.4833333 0.00349889 0.123821523 0.080862534 -20 -19 -19.5 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 14215232 14215239 - 2R_14215232_14215239_- 0.499946122 0.500047955 0.499997038 7.21E-05 RpS23 FBtr0087575 14215094 14215434 2R - 14215216 14215280 3'utr RpS23 FlyBase G23204.1 GAATATAGTGATTCCAATCGATTCTGTTTTATAAGGCCGATGTACTTAATGAGTTACATACTTGC 48 14215240 0.984389598 9 44 342 0.909090909 1.397940009 0.2 0.145833333 0.254545455 48 4 1 50 2R:14215216-14215280 8 RpS23 FBtr0087575 14215094 14215434 GTACTTAA 8mer-A1 dme-miR-252-5p 2R - 14215184 14215267 3'utr RpS23 FlyBase G17590.1 CCAATCGATTCTGTTTTATAAGGCCGATGTACTTAATGAGTTACATACTTGCATATTTAAACTATAACAGTTTACAGTTTTCGT 30 14215240 0.988945282 7 26 246 0.82 1.135662602 0.16 0.466666667 0.68 30 7 2 41 2R:14215184-14215267 8 37 980 FBgn0033912 13740.81 3287.363333 4993.36 0.002692709 0.011255221 0.00740984 1 1 1 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 2R 14215327 14215333 - 2R_14215327_14215333_- 0.391570158 0.438805989 0.415188073 0.033400754 RpS23 FBtr0087575 14215094 14215434 2R - 14215316 14215352 3'utr RpS23 FlyBase G23205.1 GTTAAATGTTTCAATTAAATGTGATTTCCTTGAATAT 53 14215327 0.735824712 5 52 499 0.985915493 1.84509804 0.169014085 0.20754717 0.408450704 53 1 0 70 2R:14215316-14215352 7 RpS23 FBtr0087575 14215094 14215434 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 14215315 14215457 stop_codon RpS23 FlyBase G17591.1 AGAAGGAACGCCCAAGATCTTAGATGAACATGCATCTAATCTTTTTCCAGACAAGCAGAGTTAGGGTTTTACAAATCTAAATAAACAAAAAACAGAAACAAACTTGTTAAATGTTTCAATTAAATGTGATTTCCTTGAATATA 95 14215327 0.919477356 24 85 809 0.919708029 1.197280558 0.145985401 0.326315789 0.532846715 95 4 7 126 2R:14215315-14215457 7 59.5 981 FBgn0033912 13740.81 3287.363333 4993.36 0.004330167 0.018099612 0.011915824 -6 -6 -6 0.15 dme-miR-2b-2-5p 6mer2-7 TGAAGA 2R 14229591 14229596 + 2R_14229591_14229596_+ 0.999999999 0.999772722 0.999886361 0.000160725 CG8468 FBtr0087533|FBtr0087534|FBtr0087532 14229566|14229566|14229566 14230620|14230620|14230620 2R + 14229537 14229613 stop_codon CG8468 FlyBase G15802.1 CGAGAAGCTAACACCCCTGCCGGCGGCCTAAGGAGCTGCTTGGATCGGAGCGAATGAAGACATGCCAGACAGCCTGA 21 14229591 0.80576175 8 19 40 0.904761905 1.278753601 0.333333333 0 0 21 2 0 19 2R:14229537-14229613 6 CG8468 FBtr0087532|FBtr0087533|FBtr0087534 14229566|14229566|14229566 14230620|14230620|14230620 TGAAGA 6mer2-7 dme-miR-2b-2-5p 2R + 14229536 14229609 stop_codon CG8468 FlyBase G11989.1 ACGAGAAGCTAACACCCCTGCCGGCGGCCTAAGGAGCTGCTTGGATCGGAGCGAATGAAGACATGCCAGACAGC 16 14229591 0.991188258 6 15 31 0.956521739 1.342422681 0.47826087 0.375 0.565217391 16 1 0 22 2R:14229536-14229609 6 12 982 FBgn0033913 3375.036667 105.6 161.63 0.003555517 0.113636364 0.074243643 0 0 0 0.15 dme-miR-184-5p 7mer-A1 GATAAGA 2R 14229765 14229771 + 2R_14229765_14229771_+ 0.780916573 0.781349834 0.781133203 0.000306319 CG8468 FBtr0087533|FBtr0087534|FBtr0087532 14229566|14229566|14229566 14230620|14230620|14230620 2R + 14229632 14229825 3'utr CG8468 FlyBase G15803.1 AGCCACAACTATCTTCGATAGCACCTTTCGGTATTGGCAACATTAATTGACAATCACTCATCCTGTCGAAGGAACTCCCGATTTCGGAGGGAAGCGAGTGCGAAAGCGTGTTCCGAGTACTTAATACAATTAAGATAAGACTAATCGTAATGTTGTGCCTTCAGCGATATCGAGTGCCTACCACACACACCCCT 75 14229756 0.974011666 26 69 438 0.892857143 1.875061263 0.273809524 0.106666667 0.202380952 75 9 0 75 2R:14229632-14229825 7 CG8468 FBtr0087532|FBtr0087533|FBtr0087534 14229566|14229566|14229566 14230620|14230620|14230620 GATAAGA 7mer-A1 dme-miR-184-5p 2R + 14229724 14229822 3'utr CG8468 FlyBase G11990.2 AGCGAGTGCGAAAGCGTGTTCCGAGTACTTAATACAATTAAGATAAGACTAATCGTAATGTTGTGCCTTCAGCGATATCGAGTGCCTACCACACACACC 36 14229756 0.954831493 14 33 219 0.918367347 1.653212514 0.102040816 0.305555556 0.489795918 36 4 0 45 2R:14229724-14229822 7 17 983 FBgn0033913 3375.036667 105.6 161.63 0.005036982 0.160984848 0.105178494 9 9 9 0.15 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 14229904 14229910 + 2R_14229904_14229910_+ 0.815725245 0.814800897 0.815263071 0.000653579 CG8468 FBtr0087533|FBtr0087534|FBtr0087532 14229566|14229566|14229566 14230620|14230620|14230620 2R + 14229834 14229925 3'utr CG8468 FlyBase G15804.1 ACAACCAACCCTATCCCAAATCACACGCATACGAGCAGAGTGGAGCGCGAGTGTAAATTATGTTTCTATAAGCTTTAGTGGAGGAGCCCATA 571 14229902 0.795326617 16 533 4754 0.937125749 1.517820732 0.393712575 0.133333333 0.260479042 570 24 18 626 2R:14229834-14229925 7 CG8468 FBtr0087532|FBtr0087533|FBtr0087534 14229566|14229566|14229566 14230620|14230620|14230620 AGCTTTA 7mer-A1 dme-miR-79-3p 2R + 14229883 14229925 3'utr CG8468 FlyBase G11991.2 AGTGTAAATTATGTTTCTATAAGCTTTAGTGGAGGAGCCCATA 290 14229902 0.755286871 8 269 2449 0.934939759 1.474888373 0.568674699 0.34375 0.544578313 288 15 12 388 2R:14229883-14229925 7 420 984 FBgn0033913 3375.036667 105.6 161.63 0.124443092 3.977272727 2.598527501 2 2 2 0.15 dme-miR-2a-2-5p 7mer-m1 GATGAGG 2R 14230350 14230356 + 2R_14230350_14230356_+ 0.797852941 0.716672661 0.757262801 0.05740307 CG8468 FBtr0087533|FBtr0087534|FBtr0087532 14229566|14229566|14229566 14230620|14230620|14230620 2R + 14230296 14230374 3'utr CG8468 FlyBase G15805.1 CGCATCGCGGGATTAGCCGATCGTGGACAAAACGAAACAAACAATCAACCGCACGATGAGGCATCTGGTAAAAGTGCTG 23 14230352 0.982134278 4 21 69 1 1.397940009 0.24 0.086956522 0.16 23 0 0 25 2R:14230296-14230374 7 CG8468 FBtr0087532|FBtr0087533|FBtr0087534 14229566|14229566|14229566 14230620|14230620|14230620 GATGAGG 7mer-m1 dme-miR-2a-2-5p 2R + 14230325 14230403 3'utr CG8468 FlyBase G11993.1 AAACGAAACAAACAATCAACCGCACGATGAGGCATCTGGTAAAAGTGCTGTGCTCTTATGCAAACCGATTTAAATATAT 15 14230352 0.94608614 8 15 65 1 1.397940009 0.12 0.466666667 0.68 15 0 0 25 2R:14230325-14230403 7 14.5 985 FBgn0033913 3375.036667 105.6 161.63 0.00429625 0.137310606 0.089711068 -2 -2 -2 0.15 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 2R 14230734 14230739 - 2R_14230734_14230739_- 0.991302036 0.999998287 0.995650162 0.006149213 Opa1 FBtr0339761|FBtr0339761 14230609|14230609 14232701|14232701 2R - 14230621 14230760 3'utr Opa1 FlyBase G23211.1 AAGACACAACACCCGAGGCGTTACTTATTTAACTTGATAGTTTAAGACCACATTTGAAATGTTTGTTCATAGTCACGCTTGAGCCCCTTAGTTAAGCATACTTTGTGCTCCGAAAGTAATAAACAAATAGATCGTTAGTT 52 14230732 0.985720637 20 48 393 0.93442623 1.45484486 0.229508197 0.134615385 0.262295082 52 3 1 57 2R:14230621-14230760 6 Opa1 FBtr0339759|FBtr0339759|FBtr0087574|FBtr0087574|FBtr0339760|FBtr0339760|FBtr0339761|FBtr0339761|FBtr0087573|FBtr0087573 14230609|14230609|14230609|14230609|14230609|14230609|14230609|14230609|14230609|14230609 14230773|14230773|14230773|14230773|14230773|14230773|14232701|14232701|14230773|14230773 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 2R - 14230712 14230759 3'utr Opa1 FlyBase G17597.2 AGACACAACACCCGAGGCGTTACTTATTTAACTTGATAGTTTAAGACC 12 14230740 0.980322849 4 11 64 1 1.278753601 0.263157895 0.5 0.684210526 12 0 0 19 2R:14230712-14230759 6 17.5 986 FBgn0261276 1194.833333 44.64 68.46666667 0.014646394 0.39202509 0.255598832 -7 1 -3 0.15 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 2R 14231557 14231564 - 2R_14231557_14231564_- 0.674231837 0.672189202 0.673210519 0.001444336 Opa1 FBtr0339761 14230609 14232701 2R - 14231544 14231586 5'utr Opa1 FlyBase G23215.1 TGCGACGAATTACCCACTGGCAGTACCTGACGCAGGATCAGCA 15 14231569 0.826937721 6 15 57 1 1.204119983 0.4375 0.066666667 0.125 15 0 0 16 2R:14231544-14231586 8 Opa1 FBtr0339761 14230609 14232701 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2R - 14231536 14231585 5'utr Opa1 FlyBase G17600.1 GCGACGAATTACCCACTGGCAGTACCTGACGCAGGATCAGCAGAAGAGGC 17 14231569 0.935518732 5 16 64 0.954545455 1.322219295 0.227272727 0.235294118 0.409090909 17 1 0 21 2R:14231536-14231585 8 16 987 FBgn0261276 1194.833333 44.64 68.46666667 0.013390989 0.358422939 0.23369036 5 5 5 0.15 dme-miR-965-3p 8mer-A1 TACGCTTA 2R 14235883 14235890 - 2R_14235883_14235890_- 0.624071356 0.624534433 0.624302894 0.00032739 CG8485 FBtr0087572|FBtr0087571|FBtr0087569 14235785|14235785|14235785 14236079|14236079|14236079 2R - 14235861 14235935 3'utr CG8485 FlyBase G23226.1 ATTTAAATTTAGTGGTAGCGTAATTGTTTTGTCTGTCGTCGTCATTACGCTTAAATTATTCTAAATATATTAATT 127 14235891 0.837384015 5 123 1266 0.979166667 1.672097858 0.138888889 0.134920635 0.243055556 126 1 2 141 2R:14235861-14235935 8 CG8485 FBtr0087569|FBtr0087572|FBtr0087571 14235785|14235785|14235785 14236079|14236079|14236079 TACGCTTA 8mer-A1 dme-miR-965-3p 2R - 14235866 14235913 3'utr CG8485 FlyBase G17610.1 ATTGTTTTGTCTGTCGTCGTCATTACGCTTAAATTATTCTAAATATAT 59 14235891 0.81672171 5 57 565 0.969387755 1.375663614 0.142857143 0.338983051 0.602040816 59 0 3 95 2R:14235866-14235913 8 90.5 988 FBgn0033915 1584.563333 63.64333333 98.23 0.057113527 1.421987116 0.921307136 1 1 1 0.15 dme-miR-282-5p 7mer-A1 GAGGCTA 2R 14243425 14243431 + 2R_14243425_14243431_+ 0.790361872 0.823154288 0.80675808 0.023187728 CG8494 FBtr0087535 14243257 14243655 2R + 14243392 14243444 3'utr CG8494 FlyBase G15814.1 AGTAGTTTTATACCTCAGTGTTTTGTTGGGGTGGAGGCTATATAAACTATGTA 23 14243423 0.981281692 5 23 167 1 1.431363764 0.074074074 0.086956522 0.222222222 23 0 0 27 2R:14243392-14243444 7 CG8494 FBtr0087535 14243257 14243655 GAGGCTA 7mer-A1 dme-miR-282-5p 2R + 14243401 14243439 3'utr CG8494 FlyBase G12004.1 ATACCTCAGTGTTTTGTTGGGGTGGAGGCTATATAAACT 14 14243423 0.950742975 4 14 85 1 1.278753601 0.105263158 0.357142857 0.526315789 14 0 0 19 2R:14243401-14243439 7 17.5 989 FBgn0033916 369.3366667 13.09333333 20.11666667 0.047382244 1.336558045 0.869925435 2 2 2 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 2R 14252662 14252667 - 2R_14252662_14252667_- 0.985504244 0.979932885 0.982718564 0.003939504 Hsc70-5 FBtr0339969|FBtr0087568 14252596|14252596 14253189|14253189 2R - 14252614 14252737 3'utr Hsc70-5 FlyBase G23238.1 ATAAGCAGATGCTCATTTGGAGGTTTAAATTTAAGATAAATTGTATGTTGGTTTCCAGTGGACAACCAAATTGACTGGGTAATATGCAATTAAATTTAAACAAATCGATGTAAACTTAAAATAA 76 14252667 0.978910554 17 68 442 0.915789474 1.094421213 0.252631579 0.210526316 0.368421053 76 2 6 87 2R:14252614-14252737 6 Hsc70-5 FBtr0087568|FBtr0339969 14252596|14252596 14253189|14253189 TTGACT 6mer3-8 dme-miR-1012-3p 2R - 14252620 14252694 3'utr Hsc70-5 FlyBase G17618.1 TATGTTGGTTTCCAGTGGACAACCAAATTGACTGGGTAATATGCAATTAAATTTAAACAAATCGATGTAAACTTA 63 14252667 0.957973607 11 58 356 0.93902439 1.40936947 0.463414634 0.26984127 0.43902439 63 3 2 77 2R:14252620-14252694 6 56 990 FBgn0001220 2208.986667 96.32 148.0166667 0.02535099 0.581395349 0.378335773 0 0 0 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 2R 14252798 14252804 - 2R_14252798_14252804_- 0.732904092 0.71765299 0.725278541 0.010784156 Hsc70-5 FBtr0339969|FBtr0087568 14252596|14252596 14253189|14253189 2R - 14252747 14252926 3'utr Hsc70-5 FlyBase G23238.2 TATTGTTTATTATGCAATCAATCGATTTTCTTTCTCCCTTACTTAAAACACGTGGTCACCGTTGTGTTGTGTTCCTGTAAGATTTTGATTATTTTTACGTATCATCTAAACTAGCTGTAGTTGTACAAAAACGAGCACAGCACAAAAATTGAATTCGAATGGCGGCCACGGCGTTCTAGA 91 14252806 0.99353246 22 79 559 0.894230769 1.123384909 0.201923077 0.131868132 0.240384615 91 5 6 93 2R:14252747-14252926 7 Hsc70-5 FBtr0087568|FBtr0339969 14252596|14252596 14253189|14253189 GTACAAA 7mer-A1 dme-miR-305-5p 2R - 14252744 14252819 3'utr Hsc70-5 FlyBase G17619.2 AAACTAGCTGTAGTTGTACAAAAACGAGCACAGCACAAAAATTGAATTCGAATGGCGGCCACGGCGTTCTAGACGC 28 14252806 0.971750105 5 24 123 0.9 0.954242509 0.225 0.25 0.475 28 1 3 36 2R:14252744-14252819 7 40 991 FBgn0001220 2208.986667 96.32 148.0166667 0.01810785 0.415282392 0.270239838 2 2 2 0.15 dme-miR-2a-2-5p 7mer-A1 GATGAGA 2R 14252992 14252998 - 2R_14252992_14252998_- 0.774261353 0.74831157 0.761286461 0.01834928 Hsc70-5 FBtr0339969|FBtr0087568 14252596|14252596 14253189|14253189 2R - 14252973 14253149 3'utr Hsc70-5 FlyBase G23239.1 ATTTAATAATAACCGCTTCTGGATTTCGATTAAGTTCTACGTTAAACACAAACACTTCATATTCCTTTATTGAATCATGAATCACGCAAAGCCACAAGCATTTACCCAAAATGTGAAGTAAACTATCCGATGCGATTAGGTCAAATCAGACGATGAGACTTCCAAGTAAACAGACGA 75 14252996 0.972880971 17 73 440 0.978947368 1.968482949 0.094736842 0.2 0.368421053 75 2 0 93 2R:14252973-14253149 7 Hsc70-5 FBtr0087568|FBtr0339969 14252596|14252596 14253189|14253189 GATGAGA 7mer-A1 dme-miR-2a-2-5p 2R - 14252981 14253019 3'utr Hsc70-5 FlyBase G17621.1 TGCGATTAGGTCAAATCAGACGATGAGACTTCCAAGTAA 31 14252996 0.949659879 5 28 110 0.975609756 1.602059991 0.146341463 0.290322581 0.463414634 31 1 0 40 2R:14252981-14253019 7 26.5 992 FBgn0001220 2208.986667 96.32 148.0166667 0.011996451 0.275124585 0.179033893 -2 -2 -2 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 14261079 14261085 + 2R_14261079_14261085_+ 0.800728866 0.53190165 0.666315258 0.190089607 beta4GalNAcTA FBtr0087539|FBtr0087539|FBtr0087539 14260628|14260628|14260628 14261150|14261150|14261150 2R + 14261033 14261088 3'utr beta4GalNAcTA FlyBase G15837.1 AGAAAGCTACACCTATTCCTACAAGGTGAAATGTAGATATTACTTTTGTGATATGC 5 14261077 0.987426376 5 5 43 1 0.903089987 0 0.4 0.625 5 0 0 8 2R:14261033-14261088 7 beta4GalNAcTA FBtr0087539|FBtr0087539|FBtr0087539 14260628|14260628|14260628 14261150|14261150|14261150 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 14261033 14261088 3'utr beta4GalNAcTA FlyBase G12023.1 AGAAAGCTACACCTATTCCTACAAGGTGAAATGTAGATATTACTTTTGTGATATGC 7 14261072 0.985747236 5 6 47 0.875 0.84509804 0 0.142857143 0.25 7 1 0 7 2R:14261033-14261088 7 2.5 993 FBgn0027538 201 13.15333333 20.18 0.012437811 0.19006589 0.123885035 2 7 4.5 0.15 dme-miR-277-3p 6mer3-8 TGCATT 2R 14355447 14355452 + 2R_14355447_14355452_+ 0.755436087 0.945669433 0.85055276 0.134515256 CG8613 FBtr0087546 14355267 14355674 2R + 14355430 14355459 3'utr CG8613 FlyBase G15846.1 TGTTAAGTCTGAGAGACTGCATTGCTCCCT 7 14355451 0.620954109 4 6 39 0.857142857 0.77815125 0.142857143 0 0 7 1 0 6 2R:14355430-14355459 6 CG8613 FBtr0087546 14355267 14355674 TGCATT 6mer3-8 dme-miR-277-3p 2R + 14355430 14355460 3'utr CG8613 FlyBase G12028.1 TGTTAAGTCTGAGAGACTGCATTGCTCCCTA 6 14355451 0.729137763 3 6 30 1 0.77815125 0 0 0 6 0 0 6 2R:14355430-14355460 6 6.5 994 FBgn0033924 155.2666667 6.23 9.476666667 0.041863461 1.043338684 0.685895181 -4 -4 -4 0.15 dme-miR-14-3p 8mer-A1 AAGACTGA 2R 14357959 14357966 - 2R_14357959_14357966_- 0.64356544 0.643565469 0.643565455 7.07E-08 Arc1 FBtr0087560 14357925 14359435 2R - 14357950 14358001 3'utr Arc1 FlyBase G23277.1 CGTGGAACTGCTAAAAATATAAAACTGTAAAACTAAAGACTGAAACTAGAAA 252 14357968 0.765409429 9 222 851 0.886363636 1.290034611 0.090909091 0.174603175 0.324675325 252 22 13 273 2R:14357950-14358001 8 Arc1 FBtr0087560 14357925 14359435 AAGACTGA 8mer-A1 dme-miR-14-3p 2R - 14357950 14358031 3'utr Arc1 FlyBase G17650.1 TGGGGGCCTATGGAAGACCACAAGTGGTTGCGTGGAACTGCTAAAAATATAAAACTGTAAAACTAAAGACTGAAACTAGAAA 228 14357968 0.742143498 13 192 822 0.852090032 1.043034632 0.118971061 0.285087719 0.475884244 228 23 23 265 2R:14357950-14358031 8 219 995 FBgn0033926 17202.14 891.9533333 1379.15 0.012730974 0.24552854 0.15879346 2 2 2 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 2R 14413758 14413763 + 2R_14413758_14413763_+ 0.992048222 0.998055502 0.995051862 0.004247803 Sin1 FBtr0087487 14413615 14413851 2R + 14413739 14413832 3'utr Sin1 FlyBase G15867.1 TTAGTTGCTAACTAAAGATTGTGTTACACATGTTTGCCTAGCCTGTAAGTATTTATTGAACTCACCCAACTACGAAGCCTGGTCCTGAAAATAA 26 14413757 0.852376367 9 25 173 1 1.477121255 0.066666667 0.153846154 0.266666667 26 0 0 30 2R:14413739-14413832 6 Sin1 FBtr0087487 14413615 14413851 TGTGTT 6mer3-8 dme-miR-317-3p 2R + 14413730 14413831 3'utr Sin1 FlyBase G12045.1 TAAGTTGTATTAGTTGCTAACTAAAGATTGTGTTACACATGTTTGCCTAGCCTGTAAGTATTTATTGAACTCACCCAACTACGAAGCCTGGTCCTGAAAATA 24 14413757 0.934973957 12 20 172 0.766666667 1.06069784 0.066666667 0.166666667 0.333333333 24 6 1 23 2R:14413730-14413831 6 11 996 FBgn0033935 145.3333333 8.676666667 13.25333333 0.075688073 1.26776796 0.829979879 1 1 1 0.15 dme-bantam-3p 6mer3-8 TGATCT 2R 14497088 14497093 + 2R_14497088_14497093_+ 0.73549275 0.633397837 0.684445293 0.072191996 L FBtr0087492 14496762 14497312 2R + 14497065 14497188 3'utr L FlyBase G15880.2 AAGTTTTCTTTCATTTTTTCGGATGATCTTCGATTGGAAATGTGTATTTTCTTCGTTCGACGAGTGTACGCCTATCATCGGCTGTTGCACATTGAGTTAACTAACTGATACTGATACTGATGAT 399 14497088 0.860283517 29 392 4025 0.985355649 2.195899652 0.462343096 0.155388471 0.294979079 399 5 2 471 2R:14497065-14497188 6 L FBtr0087492 14496762 14497312 TGATCT 6mer3-8 dme-bantam-3p 2R + 14497066 14497114 3'utr L FlyBase G12059.2 AGTTTTCTTTCATTTTTTCGGATGATCTTCGATTGGAAATGTGTATTTT 271 14497088 0.868710227 8 267 2754 0.984693878 2.586587305 0.538265306 0.346863469 0.548469388 271 6 0 386 2R:14497066-14497114 6 310.5 997 FBgn0001332 330.9966667 15.39666667 23.77 0.938075912 20.16670275 13.06268406 0 0 0 0.15 dme-miR-2a-2-5p 7mer-m1 GATGAGG 2R 14511347 14511353 + 2R_14511347_14511353_+ 0.740780409 0.711544773 0.726162591 0.020672691 Asx FBtr0332930 14510482 14512493 2R + 14511312 14511391 3'utr Asx FlyBase G15903.1 CGGTGCGGCCAAGCTGTGTGTCGCCTGTGTGATTAGATGAGGTGGATAACGTTTTGTAGTTACTTAGAGACCCGTACTTT 16 14511345 0.982184086 8 16 120 1 1.278753601 0.578947368 0.1875 0.315789474 16 0 0 19 2R:14511312-14511391 7 Asx FBtr0332930 14510482 14512493 GATGAGG 7mer-m1 dme-miR-2a-2-5p 2R + 14511322 14511396 3'utr Asx FlyBase G12078.1 AAGCTGTGTGTCGCCTGTGTGATTAGATGAGGTGGATAACGTTTTGTAGTTACTTAGAGACCCGTACTTTTAGTC 18 14511345 0.984486375 7 17 132 0.965517241 1.447158031 0.275862069 0.388888889 0.620689655 18 1 0 28 2R:14511322-14511396 7 12.5 998 FBgn0261823 1306.773333 24.71666667 37.93 0.009565546 0.505731625 0.329554442 2 2 2 0.15 dme-miR-14-3p 6mer3-8 AAGACT 2R 14512142 14512147 + 2R_14512142_14512147_+ 0.999417771 0.999890831 0.999654301 0.000334462 Asx FBtr0087493|FBtr0332929|FBtr0332930 14511350|14511350|14510482 14512493|14512493|14512493 2R + 14512109 14512188 3'utr Asx FlyBase G15910.1 CTTTAAGTTTAGTATTATCCACCCAAACGATCTAAGACTCTTCATGCCCACATTTCTTTAGCATGTAGCGTATAAACGTA 29 14512149 0.751203212 9 27 182 0.970588235 1.51851394 0 0.172413793 0.294117647 29 1 0 33 2R:14512109-14512188 6 Asx FBtr0332929|FBtr0332930|FBtr0087493 14511350|14510482|14511350 14512493|14512493|14512493 AAGACT 6mer3-8 dme-miR-14-3p 2R + 14512109 14512180 3'utr Asx FlyBase G12083.1 CTTTAAGTTTAGTATTATCCACCCAAACGATCTAAGACTCTTCATGCCCACATTTCTTTAGCATGTAGCGTA 9 14512141 0.972481451 5 8 58 0.933333333 1.146128036 0.2 0.444444444 0.666666667 9 1 0 14 2R:14512109-14512180 6 13.5 999 FBgn0261823 1306.773333 24.71666667 37.93 0.010330789 0.546190155 0.355918798 -7 1 -3 0.15 dme-miR-190-5p 6mer3-8 ACATAT 2R 14584274 14584279 + 2R_14584274_14584279_+ 0.99998995 0.999988497 0.999989223 1.06E-06 ttv FBtr0087495|FBtr0333165|FBtr0333164 14584225|14584225|14584225 14585321|14585321|14587917 2R + 14584247 14584282 3'utr ttv FlyBase G15921.1 TAGCTACAAGCGTTAATAGTACTGAATACATATACA 12 14584263 0.679981291 6 10 69 0.857142857 1.079181246 0 0.166666667 0.285714286 12 2 0 12 2R:14584247-14584282 6 ttv FBtr0333164|FBtr0087495|FBtr0333165 14584225|14584225|14584225 14587917|14585321|14585321 ACATAT 6mer3-8 dme-miR-190-5p 2R + 14584247 14584283 3'utr ttv FlyBase G12092.1 TAGCTACAAGCGTTAATAGTACTGAATACATATACAC 9 14584265 0.948368118 4 8 58 0.933333333 1.146128036 0 0.555555556 0.733333333 9 1 0 14 2R:14584247-14584283 6 9.5 1000 FBgn0265974 763.1366667 22.67 34.72 0.012448622 0.419056021 0.273617512 11 9 10 0.15 dme-miR-13b-2-5p 8mer-m1 TTTGACGC 2R 14584400 14584407 + 2R_14584400_14584407_+ 0.618174508 0.618174508 0.618174508 0 ttv FBtr0087495|FBtr0333165|FBtr0333164 14584225|14584225|14584225 14585321|14585321|14587917 2R + 14584378 14584427 3'utr ttv FlyBase G15922.1 ATGTTTAGATGAAATGCTGTTTTTTGACGCTGGCCAAGCGATGCAAGAAC 12 14584401 0.727431545 6 11 89 0.933333333 1.146128036 0.4 0.166666667 0.333333333 12 1 0 14 2R:14584378-14584427 8 ttv FBtr0333164|FBtr0087495|FBtr0333165 14584225|14584225|14584225 14587917|14585321|14585321 TTTGACGC 8mer-m1 dme-miR-13b-2-5p 2R + 14584380 14584431 3'utr ttv FlyBase G12093.1 GTTTAGATGAAATGCTGTTTTTTGACGCTGGCCAAGCGATGCAAGAACTATG 12 14584392 0.974310119 6 12 89 1 1.255272505 0.611111111 0.25 0.5 12 0 0 18 2R:14584380-14584431 8 11.5 1001 FBgn0265974 763.1366667 22.67 34.72 0.015069385 0.507278341 0.331221198 -1 8 3.5 0.15 dme-miR-1003-3p 6mer3-8 ATGTGA 2R 14584581 14584586 + 2R_14584581_14584586_+ 0.97811856 0.710066948 0.844092754 0.189541175 ttv FBtr0087495|FBtr0333165|FBtr0333164 14584225|14584225|14584225 14585321|14585321|14587917 2R + 14584554 14584613 3'utr ttv FlyBase G15923.1 ATATATATATAGTCCTTAAATACGATTATGTGAATTAGCCTAGTTAACTGCAAGCGAAGC 35 14584588 0.949189658 4 35 267 1 1.591064607 0.153846154 0.114285714 0.205128205 35 0 0 39 2R:14584554-14584613 6 ttv FBtr0333164|FBtr0087495|FBtr0333165 14584225|14584225|14584225 14587917|14585321|14585321 ATGTGA 6mer3-8 dme-miR-1003-3p 2R + 14584568 14584609 3'utr ttv FlyBase G12095.1 CTTAAATACGATTATGTGAATTAGCCTAGTTAACTGCAAGCG 32 14584588 0.814204783 2 32 251 1 1.69019608 0.204081633 0.375 0.591836735 32 0 0 49 2R:14584568-14584609 6 32.5 1002 FBgn0265974 763.1366667 22.67 34.72 0.042587392 1.433612704 0.936059908 -7 -7 -7 0.15 dme-miR-282-5p 6mer2-7 GAGGCT 2R 14584872 14584877 + 2R_14584872_14584877_+ 0.906325235 0.870632275 0.888478755 0.025238692 ttv FBtr0087495|FBtr0333165|FBtr0333164 14584225|14584225|14584225 14585321|14585321|14587917 2R + 14584848 14584887 3'utr ttv FlyBase G15926.1 AATTTCAGTTTTAAATTCCAACTTGAGGCTCCTCGAATTC 23 14584871 0.845713383 2 22 152 0.925925926 0.920818754 0.185185185 0.173913043 0.296296296 23 0 2 25 2R:14584848-14584887 6 ttv FBtr0333164|FBtr0087495|FBtr0333165 14584225|14584225|14584225 14587917|14585321|14585321 GAGGCT 6mer2-7 dme-miR-282-5p 2R + 14584828 14584886 3'utr ttv FlyBase G12097.1 GCGCAAGGCACAGTCGTCTCAATTTCAGTTTTAAATTCCAACTTGAGGCTCCTCGAATT 19 14584871 0.973376014 4 19 114 1 1.491361694 0.096774194 0.473684211 0.677419355 19 0 0 31 2R:14584828-14584886 6 19.5 1003 FBgn0265974 763.1366667 22.67 34.72 0.025552435 0.860167622 0.561635945 1 1 1 0.15 dme-miR-980-3p 7mer-A1 GCAGCTA 2R 14760435 14760441 - 2R_14760435_14760441_- 0.823337221 0.823333616 0.823335419 2.55E-06 Spred FBtr0329880 14759644 14761759 2R - 14760416 14760470 3'utr Spred FlyBase G23385.1 GTTTTCAAAAAGTCAACAAACTCATATATGCAGCTATATATATATATAAAAATAA 62 14760443 0.846923084 4 58 513 0.943661972 1.826074803 0.028169014 0.080645161 0.197183099 62 4 0 67 2R:14760416-14760470 7 Spred FBtr0329880 14759644 14761759 GCAGCTA 7mer-A1 dme-miR-980-3p 2R - 14760415 14760464 3'utr Spred FlyBase G17721.1 AAAAAGTCAACAAACTCATATATGCAGCTATATATATATATAAAAATAAT 31 14760443 0.827300942 3 30 258 0.954545455 1.62324929 0 0.322580645 0.522727273 31 2 0 42 2R:14760415-14760464 7 46.5 1004 FBgn0020767 764.69 30.76 47.25 0.060808955 1.511703511 0.984126984 2 2 2 0.15 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2R 14760846 14760852 - 2R_14760846_14760852_- 0.805826024 0.804774034 0.805300029 0.000743876 Spred FBtr0329880|FBtr0329880 14759644|14759644 14761759|14761759 2R - 14760833 14760872 3'utr Spred FlyBase G23386.1 TCGCTATGCTCGGCAATTGTTACTTAAATGTGCTTTAGTT 16 14760856 0.84422447 2 15 144 0.941176471 1.204119983 0.352941176 0.0625 0.117647059 16 1 0 16 2R:14760833-14760872 7 Spred FBtr0329880|FBtr0329880 14759644|14759644 14761759|14761759 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2R - 14760810 14760867 3'utr Spred FlyBase G17722.1 ATGCTCGGCAATTGTTACTTAAATGTGCTTTAGTTCAGAACTATGTACCCATTCGGTT 10 14760856 0.990263264 3 9 87 0.916666667 1.041392685 0.416666667 0.2 0.333333333 10 1 0 11 2R:14760810-14760867 7 12 1005 FBgn0020767 764.69 30.76 47.25 0.015692634 0.390117035 0.253968254 4 4 4 0.15 dme-miR-980-5p 6mer2-7 AAAAAC 2R 14761334 14761339 - 2R_14761334_14761339_- 0.999986118 0.999750011 0.999868064 0.000166948 Spred FBtr0329880|FBtr0087468|FBtr0329879 14759644|14761154|14761154 14761759|14762038|14762038 2R - 14761320 14761356 3'utr Spred FlyBase G23388.1 CTTAATTATAGTTTTGTAAAAACGGGCTATTTGTTTT 5 14761343 0.96429907 3 5 47 1 0.84509804 0.428571429 0.2 0.428571429 5 0 0 7 2R:14761320-14761356 6 Spred FBtr0329879|FBtr0087468|FBtr0329880 14761154|14761154|14759644 14762038|14762038|14761759 AAAAAC 6mer2-7 dme-miR-980-5p 2R - 14761324 14761348 3'utr Spred FlyBase G17724.1 TAGTTTTGTAAAAACGGGCTATTTG 6 14761343 0.550193491 4 6 43 1 1 0.1 0.5 0.7 6 0 0 10 2R:14761324-14761348 6 5 1006 FBgn0020767 764.69 30.76 47.25 0.006538597 0.162548765 0.105820106 4 4 4 0.15 dme-miR-932-5p 6mer2-7 GAATTG 2R 14761449 14761454 - 2R_14761449_14761454_- 0.711608919 0.998148334 0.854878626 0.202613953 Spred FBtr0329880|FBtr0087468|FBtr0329879 14759644|14761154|14761154 14761759|14762038|14762038 2R - 14761436 14761516 3'utr Spred FlyBase G23389.1 AAATCAGTTTGCCAAAATGGGTCTGGGGTTCGATTTTAGTATCATTTCGGTATACTCCATTTGAATTGCCATAATTAATTG 12 14761448 0.934017643 9 11 114 0.916666667 1.041392685 0.166666667 0 0 12 1 0 11 2R:14761436-14761516 6 Spred FBtr0329879|FBtr0087468|FBtr0329880 14761154|14761154|14759644 14762038|14762038|14761759 GAATTG 6mer2-7 dme-miR-932-5p 2R - 14761421 14761473 3'utr Spred FlyBase G17725.1 ATTTCGGTATACTCCATTTGAATTGCCATAATTAATTGTATATACAAAAGAGC 5 14761456 0.980386288 4 5 38 1 0.84509804 0.142857143 0.4 0.571428571 5 0 0 7 2R:14761421-14761473 6 4.5 1007 FBgn0020767 764.69 30.76 47.25 0.005884738 0.146293888 0.095238095 -6 2 -2 0.15 dme-miR-2535b-3p 6mer3-8 CCGTGA 2R 14846178 14846183 - 2R_14846178_14846183_- 0.999935337 0.999995078 0.999965208 4.23E-05 CG10209 FBtr0329883|FBtr0087462 14846062|14846062 14846330|14846417 2R - 14846151 14846200 3'utr CG10209 FlyBase G23400.1 TTTGTAGTAAGTGGATGCCGTGATCCTCATGTAAATGTTCCCGTGGCAAT 26 14846180 0.809774592 4 26 159 1 1.447158031 0.25 0.038461538 0.107142857 26 0 0 28 2R:14846151-14846200 6 CG10209 FBtr0087462|FBtr0329883 14846062|14846062 14846417|14846330 CCGTGA 6mer3-8 dme-miR-2535b-3p 2R - 14846103 14846200 3'utr CG10209 FlyBase G17730.1 TTTGTAGTAAGTGGATGCCGTGATCCTCATGTAAATGTTCCCGTGGCAATAACAGCGTAGCTCAACTGTGACTCAAGTTCTCAATAGATCGCGACGCA 26 14846181 0.980763921 7 24 166 0.953488372 1.612783857 0.162790698 0.538461538 0.720930233 26 2 0 41 2R:14846103-14846200 6 20.5 1008 FBgn0033971 206.33 12.39 18.95 0.099355402 1.654560129 1.081794195 -3 -2 -2.5 0.15 dme-miR-970-3p 7mer-m8 TCTTATG 2R 14846291 14846297 - 2R_14846291_14846297_- 0.533836216 0.639921091 0.586878654 0.075013352 CG10209 FBtr0329883|FBtr0087462 14846062|14846062 14846330|14846417 2R - 14846295 14846322 3'utr CG10209 FlyBase G23402.1 TTAGACGGCAATTCGTAGGTCTCATTCT 8 14846298 0.679150903 4 8 54 1 0.903089987 0.125 0 0 8 0 0 8 2R:14846295-14846322 2 CG10209 FBtr0087462|FBtr0329883 14846062|14846062 14846417|14846330 TCTTATG 7mer-m8 dme-miR-970-3p 2R - 14846295 14846327 3'utr CG10209 FlyBase G17731.1 TCGATTTAGACGGCAATTCGTAGGTCTCATTCT 16 14846298 0.622991944 6 16 112 1 1.342422681 0.227272727 0.3125 0.5 16 0 0 22 2R:14846295-14846327 2 11 1009 FBgn0033971 206.33 12.39 18.95 0.053312654 0.887812752 0.580474934 1 1 1 0.15 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2R 14857343 14857350 + 2R_14857343_14857350_+ 0.631127956 0.631119188 0.631123572 6.22E-06 HPS1 FBtr0087449 14857301 14857502 2R + 14857330 14857369 3'utr HPS1 FlyBase G15977.1 TTATAACATGATTTCTAGTCAATTTTCGAGACTCCTAGGC 66 14857342 0.719346163 5 64 592 0.988095238 1.919078092 0 0.196969697 0.369047619 66 1 0 83 2R:14857330-14857369 8 HPS1 FBtr0087449 14857301 14857502 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R + 14857330 14857372 3'utr HPS1 FlyBase G12133.1 TTATAACATGATTTCTAGTCAATTTTCGAGACTCCTAGGCGAG 50 14857342 0.73809567 6 48 461 0.985915493 1.84509804 0.056338028 0.32 0.521126761 50 1 0 70 2R:14857330-14857372 8 57 1010 FBgn0033973 78.66666667 4.6 7.043333333 0.724576271 12.39130435 8.09275911 1 1 1 0.15 dme-miR-8-3p 8mer-A1 CAGTATTA 2R 14867118 14867125 - 2R_14867118_14867125_- 0.664755945 0.659450953 0.662103449 0.003751131 Inr-a FBtr0301513 14866611 14867304 2R - 14867102 14867147 3'utr Inr-a FlyBase G23449.1 TGGTTATAAAAGCGACCATTGCCAGTATTACTTACTGATCAACATT 49 14867128 0.836142673 4 47 311 0.981132075 1.716003344 0.150943396 0.081632653 0.150943396 49 1 0 52 2R:14867102-14867147 8 Inr-a FBtr0301513 14866611 14867304 CAGTATTA 8mer-A1 dme-miR-8-3p 2R - 14867082 14867151 3'utr Inr-a FlyBase G17766.1 GAGATGGTTATAAAAGCGACCATTGCCAGTATTACTTACTGATCAACATTATTGACAAAGATGTCTATAA 47 14867128 0.975054819 2 47 300 1 1.897627091 0.202531646 0.489361702 0.696202532 47 0 0 79 2R:14867082-14867151 8 46 1011 FBgn0264962 1522.043333 60.58 92.41666667 0.03022253 0.75932651 0.497745717 3 3 3 0.15 dme-miR-184-5p 7mer-m8 TGATAAG 2R 14867260 14867266 - 2R_14867260_14867266_- 0.285365612 0.323540265 0.304452939 0.026993589 Inr-a FBtr0301513 14866611 14867304 2R - 14867175 14867375 stop_codon Inr-a FlyBase G23450.1 TCAACCAGAATGGCGGCACTCGATGGCTTAGGTTGGTGGAAGGGCGGGTTATTGGGACCGTATGTGGTTGACAAGTGGAAATCTTCTGCTCAACTCTAACCGAAGTCTGTGATAAGTACAATTGTGATACCAAAGTGGCGTTCCCAACAATGGAATGTGTTAAACTATAGATTTTGCTTGAATTCTGATAAATATCATATT 139 14867270 0.979531721 25 131 906 0.955307263 1.630936119 0.094972067 0.223021583 0.396648045 139 5 3 171 2R:14867175-14867375 7 Inr-a FBtr0301513 14866611 14867304 TGATAAG 7mer-m8 dme-miR-184-5p 2R - 14867196 14867324 stop_codon Inr-a FlyBase G17767.1 TTGGGACCGTATGTGGTTGACAAGTGGAAATCTTCTGCTCAACTCTAACCGAAGTCTGTGATAAGTACAATTGTGATACCAAAGTGGCGTTCCCAACAATGGAATGTGTTAAACTATAGATTTTGCTTG 110 14867270 0.85805092 18 98 710 0.887573964 1.477121255 0.147928994 0.409090909 0.615384615 110 15 4 150 2R:14867196-14867324 7 86 1012 FBgn0264962 1522.043333 60.58 92.41666667 0.05650299 1.419610432 0.930568079 4 4 4 0.15 dme-miR-1007-3p 6mer3-8 TGAGCT 2R 14901679 14901684 - 2R_14901679_14901684_- 0.80435694 0.926107397 0.865232168 0.086090604 CG10249 FBtr0303758|FBtr0112929|FBtr0087429|FBtr0303757|FBtr0332856|FBtr0087430|FBtr0301334|FBtr0303756|FBtr0087431 14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473 14901972|14901972|14901972|14901972|14901972|14901972|14902362|14901972|14901972 2R - 14901652 14901731 3'utr CG10249 FlyBase G23465.1 TGAGACACATCGATCAACTAATGCAATTAAGTACTACTGCACAGGCCTGAGCTACCGATCTTAAAGTAGCCGACAAACCA 32 14901694 0.952747833 9 29 153 0.918918919 1.230448921 0.135135135 0.15625 0.27027027 32 2 1 34 2R:14901652-14901731 6 CG10249 FBtr0303757|FBtr0087429|FBtr0112929|FBtr0303758|FBtr0087431|FBtr0303756|FBtr0087430|FBtr0301334|FBtr0332856 14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473 14901972|14901972|14901972|14901972|14901972|14901972|14901972|14902362|14901972 TGAGCT 6mer3-8 dme-miR-1007-3p 2R - 14901658 14901749 3'utr CG10249 FlyBase G17780.1 AACTCTGTGTAATCATTCTGAGACACATCGATCAACTAATGCAATTAAGTACTACTGCACAGGCCTGAGCTACCGATCTTAAAGTAGCCGAC 22 14901680 0.935827302 11 18 99 0.9375 1.176091259 0.1875 0.363636364 0.5625 22 1 1 30 2R:14901658-14901749 6 13.5 1013 FBgn0027596 1054.266667 34.76666667 52.75333333 0.012805109 0.388302972 0.255907999 10 -4 3 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT 2R 14901846 14901852 - 2R_14901846_14901852_- 0.658285419 0.497311702 0.577798561 0.113825595 CG10249 FBtr0303758|FBtr0112929|FBtr0087429|FBtr0303757|FBtr0332856|FBtr0087430|FBtr0301334|FBtr0303756|FBtr0087431 14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473 14901972|14901972|14901972|14901972|14901972|14901972|14902362|14901972|14901972 2R - 14901805 14901924 3'utr CG10249 FlyBase G23467.1 AAGATTTAAATTAGCATTTCGTAGAGCTGCTCAGAATACATTCCATACCGCCATACTGCGGAAAGGCACAAGGGCAGCTTACACTTTTCATATGTATATTGTATAACTAGAATTCGTTTG 47 14901845 0.787507029 17 42 337 0.927272727 1.707570176 0.145454545 0.14893617 0.272727273 47 4 0 51 2R:14901805-14901924 7 CG10249 FBtr0303757|FBtr0087429|FBtr0112929|FBtr0303758|FBtr0087431|FBtr0303756|FBtr0087430|FBtr0301334|FBtr0332856 14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473 14901972|14901972|14901972|14901972|14901972|14901972|14901972|14902362|14901972 GGCAGCT 7mer-m8 dme-miR-980-3p 2R - 14901812 14901979 stop_codon CG10249 FlyBase G17781.1 GCAGTAAAGCCATTTCGTATTAGCGGCCAAATCGACGAACAAACAGCTAGTGACTAAGATTTAAATTAGCATTTCGTAGAGCTGCTCAGAATACATTCCATACCGCCATACTGCGGAAAGGCACAAGGGCAGCTTACACTTTTCATATGTATATTGTATAACTAGAAT 41 14901845 0.976038614 14 36 208 0.90625 1.462397998 0.125 0.43902439 0.640625 41 5 1 58 2R:14901812-14901979 7 15.5 1014 FBgn0027596 1054.266667 34.76666667 52.75333333 0.014702163 0.445829338 0.293820296 -7 -7 -7 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 2R 14939139 14939145 + 2R_14939139_14939145_+ 0.616428732 0.619099632 0.617764182 0.001888612 Lap1 FBtr0087407|FBtr0303759 14939080|14939080 14940722|14939959 2R + 14939055 14939147 stop_codon Lap1 FlyBase G16002.1 ATGAACATAATGTTGTCGAGAAAATGATGGACCATCTATTTACCGACCTAAGCCGATTCCCATCCCGAGACCGAAGACTTTTTGTGCATTTTT 91 14939135 0.968072193 13 89 470 0.990909091 2.037426498 0.472727273 0.175824176 0.318181818 91 1 0 109 2R:14939055-14939147 7 Lap1 FBtr0087407|FBtr0303759 14939080|14939080 14940722|14939959 TGCATTT 7mer-m8 dme-miR-277-3p 2R + 14939095 14939152 3'utr Lap1 FlyBase G12147.1 TACCGACCTAAGCCGATTCCCATCCCGAGACCGAAGACTTTTTGTGCATTTTTCTAAC 66 14939135 0.701910176 8 59 330 0.914893617 1.457377197 0.478723404 0.318181818 0.521276596 66 6 2 86 2R:14939095-14939152 7 38.5 1015 FBgn0033984 772.6433333 22.73333333 35.04666667 0.049828942 1.693548387 1.098535286 4 4 4 0.15 dme-miR-8-3p 8mer-A1 CAGTATTA 2R 14940040 14940047 + 2R_14940040_14940047_+ 0.572878644 0.644843288 0.608860966 0.050886727 Lap1 FBtr0087407 14939080 14940722 2R + 14939983 14940059 3'utr Lap1 FlyBase G16005.1 ATTTTCAATGGTGAACTGTTAGCACAAACTGAATTCTCACGCTATTGGCATTGTGATCAGTATTATTATTTATCTGG 65 14940038 0.861331328 14 63 673 0.974025974 1.875061263 0.12987013 0.184615385 0.311688312 65 2 0 75 2R:14939983-14940059 8 Lap1 FBtr0087407 14939080 14940722 CAGTATTA 8mer-A1 dme-miR-8-3p 2R + 14939952 14940061 3'utr Lap1 FlyBase G12152.1 TATTGTCCAATCGATCGAAGTGTCAAACATTATTTTCAATGGTGAACTGTTAGCACAAACTGAATTCTCACGCTATTGGCATTGTGATCAGTATTATTATTTATCTGGTT 41 14940038 0.990487838 13 39 405 0.951612903 1.293730757 0.161290323 0.414634146 0.612903226 41 1 2 59 2R:14939952-14940061 8 43 1016 FBgn0033984 772.6433333 22.73333333 35.04666667 0.055653104 1.891495601 1.226935515 2 2 2 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 2R 14945465 14945470 - 2R_14945465_14945470_- 0.973946888 0.993797301 0.983872094 0.014036352 aPKC FBtr0329887|FBtr0329890|FBtr0303431|FBtr0329888|FBtr0303433|FBtr0329889 14945112|14945112|14945112|14945112|14945112|14945112 14946515|14946046|14946515|14946515|14946515|14946063 2R - 14945431 14945490 3'utr aPKC FlyBase G23483.1 ACTCTAATGTAAAATGTGTGTGTGTTAGTATTAGAGAGCAGAGCATGGTTTTTAAAGGCG 10 14945476 0.960664226 5 8 79 0.916666667 1.041392685 0.5 0.1 0.25 10 1 0 11 2R:14945431-14945490 6 aPKC FBtr0329890|FBtr0303431|FBtr0303433|FBtr0329888|FBtr0329889|FBtr0329887 14945112|14945112|14945112|14945112|14945112|14945112 14946046|14946515|14946515|14946515|14946063|14946515 TGTGTT 6mer3-8 dme-miR-317-3p 2R - 14945444 14945485 3'utr aPKC FlyBase G17795.1 AATGTAAAATGTGTGTGTGTTAGTATTAGAGAGCAGAGCATG 5 14945475 0.989935165 4 4 40 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 2R:14945444-14945485 6 5.5 1017 FBgn0261854 1305.743333 49.00666667 75.25333333 0.00421216 0.112229629 0.073086464 6 5 5.5 0.15 dme-miR-33-5p 8mer-A1 CAATGCAA 2R 14945723 14945730 - 2R_14945723_14945730_- 0.585188569 0.539726389 0.562457479 0.03214663 aPKC FBtr0329887|FBtr0329890|FBtr0303431|FBtr0329888|FBtr0303433|FBtr0329889 14945112|14945112|14945112|14945112|14945112|14945112 14946515|14946046|14946515|14946515|14946515|14946063 2R - 14945681 14945745 3'utr aPKC FlyBase G23485.1 AACCATTTCAAAACTCAATGCAAGACTTTTCACCAAGAAACTTAGGGGTTTGACGATCCCGCGAG 42 14945717 0.97226582 5 39 232 0.941176471 1.681241237 0.019607843 0.119047619 0.274509804 42 3 0 48 2R:14945681-14945745 8 aPKC FBtr0329890|FBtr0303431|FBtr0303433|FBtr0329888|FBtr0329889|FBtr0329887 14945112|14945112|14945112|14945112|14945112|14945112 14946046|14946515|14946515|14946515|14946063|14946515 CAATGCAA 8mer-A1 dme-miR-33-5p 2R - 14945703 14945772 3'utr aPKC FlyBase G17796.1 AGGCGAACTTTATGCAAGCAAAAGATAAACCATTTCAAAACTCAATGCAAGACTTTTCACCAAGAAACTT 35 14945717 0.885558642 6 34 172 0.979591837 1.681241237 0.040816327 0.285714286 0.489795918 35 1 0 48 2R:14945703-14945772 8 35 1018 FBgn0261854 1305.743333 49.00666667 75.25333333 0.026804655 0.714188546 0.465095677 -13 -13 -13 0.15 dme-miR-318-3p 7mer-A1 CCAGTGA 2R 14946395 14946401 - 2R_14946395_14946401_- 0.82043955 0.823197204 0.821818377 0.001949918 aPKC FBtr0329887|FBtr0303429|FBtr0303430|FBtr0303437|FBtr0303434|FBtr0303435|FBtr0303431|FBtr0329888|FBtr0303433|FBtr0303432 14945112|14946104|14946104|14946104|14944456|14946104|14945112|14945112|14945112|14946104 14946515|14946515|14946515|14946776|14946515|14946515|14946515|14946515|14946515|14946515 2R - 14946360 14946412 3'utr aPKC FlyBase G23486.1 TGGCGAGGATTCCAGTGATTACGATTCCGTGGCTGACGATTTGAGTCTCCTGC 12 14946390 0.688360049 5 12 88 1 1.146128036 0.357142857 0.083333333 0.214285714 12 0 0 14 2R:14946360-14946412 7 aPKC FBtr0303434|FBtr0303432|FBtr0303431|FBtr0303435|FBtr0303433|FBtr0329888|FBtr0329887|FBtr0303429|FBtr0303430|FBtr0303437 14944456|14946104|14945112|14946104|14945112|14945112|14945112|14946104|14946104|14946104 14946515|14946515|14946515|14946515|14946515|14946515|14946515|14946515|14946515|14946776 CCAGTGA 7mer-A1 dme-miR-318-3p 2R - 14946361 14946411 3'utr aPKC FlyBase G17797.1 GGCGAGGATTCCAGTGATTACGATTCCGTGGCTGACGATTTGAGTCTCCTG 7 14946392 0.975518432 4 7 44 1 1.079181246 0.583333333 0.571428571 0.75 7 0 0 12 2R:14946361-14946411 7 8 1019 FBgn0261854 1305.743333 49.00666667 75.25333333 0.006126778 0.163243096 0.106307583 -11 -9 -10 0.15 dme-bantam-3p 7mer-A1 GATCTCA 2R 15142987 15142993 + 2R_15142987_15142993_+ 0.822440031 0.823338118 0.822889074 0.000635053 chn FBtr0305217 15140383 15143633 2R + 15142975 15143012 3'utr chn FlyBase G16024.1 AAACGGCAGTTGGATCTCAGCACACCTCGTCGGAGTCC 11 15142984 0.827527859 2 10 43 0.928571429 1.113943352 0 0.272727273 0.428571429 11 1 0 13 2R:15142975-15143012 7 chn FBtr0305217 15140383 15143633 GATCTCA 7mer-A1 dme-bantam-3p 2R + 15142975 15143012 3'utr chn FlyBase G12169.1 AAACGGCAGTTGGATCTCAGCACACCTCGTCGGAGTCC 9 15142985 0.850944964 3 8 38 0.9375 1.176091259 0 0.555555556 0.75 9 1 0 15 2R:15142975-15143012 7 10 1020 FBgn0015371 413.87 9.896666667 15.28666667 0.024162177 1.010441226 0.65416485 3 2 2.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 2R 15143592 15143599 + 2R_15143592_15143599_+ 0.617266905 0.616895498 0.617081201 0.000262619 chn FBtr0305217|FBtr0305214|FBtr0111006|FBtr0305213|FBtr0087415|FBtr0305215|FBtr0087416|FBtr0305216 15140383|15143450|15143450|15143450|15143450|15143450|15143450|15143450 15143633|15144783|15143633|15144783|15144783|15144783|15143633|15144783 2R + 15143549 15143617 3'utr chn FlyBase G16025.1 ATTTAAAAAATTGCATTTAATTTTTTAAATTTTAAGTTGTGATGTACCTGAAATATGATTTCTCTTAAA 365 15143591 0.848455508 6 359 2596 0.987288136 2.668385917 0.006355932 0.235616438 0.408898305 365 6 0 466 2R:15143549-15143617 8 chn FBtr0087416|FBtr0305216|FBtr0087415|FBtr0305215|FBtr0111006|FBtr0305213|FBtr0305217|FBtr0305214 15143450|15143450|15143450|15143450|15143450|15143450|15140383|15143450 15143633|15144783|15144783|15144783|15143633|15144783|15143633|15144783 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2R + 15143549 15143619 3'utr chn FlyBase G12170.1 ATTTAAAAAATTGCATTTAATTTTTTAAATTTTAAGTTGTGATGTACCTGAAATATGATTTCTCTTAAACA 276 15143591 0.957782997 6 275 1914 0.997487437 2.598790507 0.005025126 0.358695652 0.555276382 276 1 0 397 2R:15143549-15143619 8 316 1021 FBgn0015371 413.87 9.896666667 15.28666667 0.763524778 31.92994274 20.67160925 1 1 1 0.15 dme-miR-283-5p 8mer-m1 TGATATTT 2R 15204187 15204194 + 2R_15204187_15204194_+ 0.55434322 0.553632979 0.5539881 0.000502187 CG11807 FBtr0087363|FBtr0310139 15204105|15204105 15204466|15204466 2R + 15204172 15204212 3'utr CG11807 FlyBase G16044.1 ATAAGTATTGCCTATTGATATTTCTTGCAACTAAACCCTAT 15 15204186 0.754482161 4 13 155 0.882352941 1.176091259 0.117647059 0.133333333 0.235294118 15 2 0 15 2R:15204172-15204212 8 CG11807 FBtr0310139|FBtr0087363 15204105|15204105 15204466|15204466 TGATATTT 8mer-m1 dme-miR-283-5p 2R + 15204170 15204200 3'utr CG11807 FlyBase G12180.1 TTATAAGTATTGCCTATTGATATTTCTTGCA 7 15204186 0.772898109 2 7 82 1 0.954242509 0.333333333 0.285714286 0.444444444 7 0 0 9 2R:15204170-15204200 8 11 1022 FBgn0033996 352.6333333 22.09 33.89 0.031193875 0.497962879 0.324579522 1 1 1 0.15 dme-miR-999-3p 6mer3-8 AGTTAA 2R 15206886 15206891 - 2R_15206886_15206891_- 0.716927646 0.999999965 0.858463806 0.200162414 row FBtr0087402 15206525 15206949 2R - 15206881 15206931 stop_codon row FlyBase G23525.2 CTCAAATCACGCGACTATACCCTTCACTGGCAGAACTATTAGTTAAAGTTC 201 15206904 0.852814722 12 161 1631 0.803571429 1.301029996 0.544642857 0.109452736 0.200892857 201 36 8 180 2R:15206881-15206931 6 row FBtr0087402 15206525 15206949 AGTTAA 6mer3-8 dme-miR-999-3p 2R - 15206846 15206929 stop_codon row FlyBase G17822.1 CAAATCACGCGACTATACCCTTCACTGGCAGAACTATTAGTTAAAGTTCATTCATATTCATCGCACATTGGCCATATCCCGAAT 135 15206904 0.989251937 11 111 1064 0.835748792 1.459894853 0.570048309 0.348148148 0.574879227 135 29 5 173 2R:15206846-15206929 6 96 1023 FBgn0033998 1573.363333 48.92333333 74.57333333 0.061015786 1.962253867 1.28732344 13 13 13 0.15 dme-miR-2535b-3p 6mer3-8 CCGTGA 2R 15211531 15211536 - 2R_15211531_15211536_- 0.560210183 0.950043335 0.755126759 0.275653629 row FBtr0087403 15211243 15211571 2R - 15211519 15211549 3'utr row FlyBase G23543.1 GTTTTTATTTAGGCCGTGAATAGAATAGTGC 9 15211542 0.689304339 3 9 81 1 1.041392685 0.090909091 0.222222222 0.363636364 9 0 0 11 2R:15211519-15211549 6 row FBtr0087403 15211243 15211571 CCGTGA 6mer3-8 dme-miR-2535b-3p 2R - 15211516 15211551 3'utr row FlyBase G17835.1 AAGTTTTTATTTAGGCCGTGAATAGAATAGTGCGTT 8 15211541 0.694719022 4 8 74 1 1.041392685 0.090909091 0.375 0.545454545 8 0 0 11 2R:15211516-15211551 6 8.5 1024 FBgn0033998 1573.363333 48.92333333 74.57333333 0.005402439 0.173741228 0.113981763 6 5 5.5 0.15 dme-bantam-3p 6mer2-7 GATCTC 2R 15222769 15222774 + 2R_15222769_15222774_+ 0.999985148 0.999822571 0.99990386 0.000114905 CG8079 FBtr0339995|FBtr0339994 15222101|15222101 15223671|15223671 2R + 15222738 15222779 3'utr CG8079 FlyBase G16051.1 CAATGGATCCCCAATGTCCAGCGACGCCATGGATCTCGTTCA 7 15222767 0.963412443 3 7 35 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 2R:15222738-15222779 6 CG8079 FBtr0339995|FBtr0339994 15222101|15222101 15223671|15223671 GATCTC 6mer2-7 dme-bantam-3p 2R + 15222751 15222786 3'utr CG8079 FlyBase G12187.1 ATGTCCAGCGACGCCATGGATCTCGTTCACGGCAGT 12 15222767 0.959183692 2 11 56 0.947368421 1.255272505 0.210526316 0.5 0.684210526 12 1 0 18 2R:15222751-15222786 6 9 1025 FBgn0034002 425.32 23.75 36.47 0.021160538 0.378947368 0.246778174 2 2 2 0.15 dme-miR-252-5p 7mer-m8 GTACTTA 2R 15262867 15262873 - 2R_15262867_15262873_- 0.587959072 0.588196007 0.588077539 0.000167514 Trpm FBtr0339080|FBtr0339082|FBtr0339077|FBtr0339079|FBtr0339074|FBtr0339081|FBtr0339078|FBtr0339076 15262806|15262806|15262806|15262806|15262806|15262806|15262806|15262806 15263722|15263722|15263722|15263722|15263722|15263722|15263722|15263722 2R - 15262850 15262977 3'utr Trpm FlyBase G23564.1 AAATTGTTCATGTTTGGCCAATGTGTGCTAGTAACTTAAATTAGATTTTTAAATATTTTCAAGGATTAAGAATAACAATGCATTTTAATAAAATATTTATGATTGTACTTATTTATGTTAAGAATTGT 61 15262874 0.89564363 13 58 592 0.945205479 1.537819095 0.068493151 0.180327869 0.315068493 61 3 1 69 2R:15262850-15262977 7 Trpm FBtr0339074|FBtr0339081|FBtr0339078|FBtr0339076|FBtr0339080|FBtr0339077|FBtr0339082|FBtr0339079 15262806|15262806|15262806|15262806|15262806|15262806|15262806|15262806 15263722|15263722|15263722|15263722|15263722|15263722|15263722|15263722 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 15262852 15262915 3'utr Trpm FlyBase G17844.1 GGATTAAGAATAACAATGCATTTTAATAAAATATTTATGATTGTACTTATTTATGTTAAGAATT 26 15262874 0.798963332 8 26 242 1 1.591064607 0.128205128 0.461538462 0.641025641 26 0 0 39 2R:15262852-15262915 7 17 1026 FBgn0265194 654.6833333 11.36 17.34333333 0.025966752 1.496478873 0.980203729 1 1 1 0.15 dme-miR-980-3p 6mer2-7 GCAGCT 2R 15263210 15263215 - 2R_15263210_15263215_- 0.996372006 0.866560843 0.931466425 0.09179038 Trpm FBtr0339080|FBtr0339082|FBtr0339077|FBtr0339079|FBtr0339074|FBtr0339081|FBtr0339078|FBtr0339076 15262806|15262806|15262806|15262806|15262806|15262806|15262806|15262806 15263722|15263722|15263722|15263722|15263722|15263722|15263722|15263722 2R - 15263185 15263242 3'utr Trpm FlyBase G23566.1 TTACCTCAGCTCAATTAGAAACCTATCGCAGCTCAATGTACTTTATGCCTGTCCCTGT 59 15263217 0.833470585 8 55 324 0.935897436 1.386201605 0.064102564 0.305084746 0.474358974 59 3 2 73 2R:15263185-15263242 6 Trpm FBtr0339074|FBtr0339081|FBtr0339078|FBtr0339076|FBtr0339080|FBtr0339077|FBtr0339082|FBtr0339079 15262806|15262806|15262806|15262806|15262806|15262806|15262806|15262806 15263722|15263722|15263722|15263722|15263722|15263722|15263722|15263722 GCAGCT 6mer2-7 dme-miR-980-3p 2R - 15263177 15263228 3'utr Trpm FlyBase G17846.1 TTAGAAACCTATCGCAGCTCAATGTACTTTATGCCTGTCCCTGTCGGAGTTC 31 15263206 0.718915996 5 30 165 0.976190476 1.612783857 0.119047619 0.322580645 0.5 31 1 0 41 2R:15263177-15263228 6 37.5 1027 FBgn0265194 654.6833333 11.36 17.34333333 0.057279601 3.301056338 2.162214107 2 -9 -3.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2R 15263656 15263662 - 2R_15263656_15263662_- 0.636884379 0.819155788 0.728020084 0.128885343 Trpm FBtr0339080|FBtr0339082|FBtr0339077|FBtr0339079|FBtr0339074|FBtr0339081|FBtr0339078|FBtr0339076 15262806|15262806|15262806|15262806|15262806|15262806|15262806|15262806 15263722|15263722|15263722|15263722|15263722|15263722|15263722|15263722 2R - 15263634 15263681 3'utr Trpm FlyBase G23567.1 ACTGTGCTCAATGGGAAAACTAGTCATAAGAGTGGGGTGATAAATAAG 20 15263655 0.780136088 5 19 91 0.954545455 1.322219295 0.363636364 0.05 0.136363636 20 1 0 21 2R:15263634-15263681 7 Trpm FBtr0339074|FBtr0339081|FBtr0339078|FBtr0339076|FBtr0339080|FBtr0339077|FBtr0339082|FBtr0339079 15262806|15262806|15262806|15262806|15262806|15262806|15262806|15262806 15263722|15263722|15263722|15263722|15263722|15263722|15263722|15263722 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R - 15263613 15263713 3'utr Trpm FlyBase G17847.1 AGGCCGACGAAAATGGATCGTGTGTGTCCCACACTGTGCTCAATGGGAAAACTAGTCATAAGAGTGGGGTGATAAATAAGTTGTTGAACTAGCGTTGGGAT 20 15263655 0.957283412 7 18 91 0.884615385 1.361727836 0.269230769 0.25 0.423076923 20 3 0 23 2R:15263613-15263713 7 17 1028 FBgn0265194 654.6833333 11.36 17.34333333 0.025966752 1.496478873 0.980203729 -7 -7 -7 0.15 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2R 15266558 15266563 - 2R_15266558_15266563_- 0.998276138 0.98696384 0.992619989 0.007999004 Trpm FBtr0339075 15266379 15267776 2R - 15266540 15266582 3'utr Trpm FlyBase G23572.1 TGCTTTAGCTTCTAGGCTCTTTGACATCAGTAATATTATATAT 17 15266562 0.720090845 5 16 151 1 1.255272505 0.111111111 0.058823529 0.111111111 17 0 0 18 2R:15266540-15266582 6 Trpm FBtr0339075 15266379 15267776 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2R - 15266508 15266585 3'utr Trpm FlyBase G17849.1 ACATGCTTTAGCTTCTAGGCTCTTTGACATCAGTAATATTATATATTTTGCAGACTCTCTTTTAATTATTTTTAAACC 8 15266562 0.984523894 4 8 73 1 1.079181246 0.25 0.375 0.583333333 8 0 0 12 2R:15266508-15266585 6 9.5 1029 FBgn0265194 654.6833333 11.36 17.34333333 0.014510832 0.836267606 0.547760907 -1 -1 -1 0.15 dme-miR-307a-3p 7mer-m8 GGTTGTG 2R 15312904 15312910 + 2R_15312904_15312910_+ 0.702956271 0.702679071 0.702817671 0.00019601 mus210 FBtr0308700 15312836 15312964 2R + 15312843 15312937 3'utr mus210 FlyBase G16063.1 CAGCCAGGCTCCCGGAAGAGTTGGCGTTGGCAGAAGGCAGTCGAGCATGCTTATCCAAGTTGGTTGTGGCGCTGGCATTTCTGGTATCTGATGAA 13 15312903 0.980783063 8 13 89 1 1.113943352 0.153846154 0 0 13 0 0 13 2R:15312843-15312937 7 mus210 FBtr0308700 15312836 15312964 GGTTGTG 7mer-m8 dme-miR-307a-3p 2R + 15312891 15312937 3'utr mus210 FlyBase G12192.1 GCTTATCCAAGTTGGTTGTGGCGCTGGCATTTCTGGTATCTGATGAA 6 15312903 0.983056415 4 6 48 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 2R:15312891-15312937 7 7 1030 FBgn0004698 1924.22 65.94333333 101.31 0.003637838 0.106151746 0.069094857 1 1 1 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 15318102 15318108 - 2R_15318102_15318108_- 0.410416425 0.430244774 0.4203306 0.014020796 CG8155 FBtr0087391 15317815 15318579 2R - 15318058 15318170 3'utr CG8155 FlyBase G23588.1 TTTATCTGCACCTTTGCCAAACGATCAAATGCGAGCTGTTTGGCTGGAAATTGCTTTATTTCTCTAGTCTGCTAATGCATTCCATGCTGTTGTAAAAACTATATTTTAGATTT 100 15318101 0.797159459 17 92 965 0.911290323 2.053078443 0.274193548 0.19 0.346774194 100 11 0 113 2R:15318058-15318170 7 CG8155 FBtr0087391 15317815 15318579 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R - 15318042 15318167 3'utr CG8155 FlyBase G17862.1 ATCTGCACCTTTGCCAAACGATCAAATGCGAGCTGTTTGGCTGGAAATTGCTTTATTTCTCTAGTCTGCTAATGCATTCCATGCTGTTGTAAAAACTATATTTTAGATTTAAAATCGCGCCTAAAT 64 15318101 0.989255874 17 62 594 0.978723404 1.963787827 0.308510638 0.359375 0.563829787 64 2 0 92 2R:15318042-15318167 7 49.5 1031 FBgn0034009 669.7533333 19.16666667 29.26666667 0.073907807 2.582608696 1.691343964 -7 -7 -7 0.15 dme-miR-986-5p 6mer3-8 ATTCGA 2R 15324392 15324397 + 2R_15324392_15324397_+ 0.947858667 0.999978301 0.973918484 0.036854123 Arf51F FBtr0087379|FBtr0087376|FBtr0087375|FBtr0087377|FBtr0087378 15324343|15324343|15324343|15324343|15324343 15324892|15324892|15325490|15324892|15324892 2R + 15324188 15324432 lincRNA_intron-lincRNA_exon Arf51F FlyBase G16088.1 GTTCTCTCTTGCAGCAATGAAACCCCATGAAATCCAGGAAAAACTAGGTTTAACTAGAATAAGAGATCGCAATTGGTATGTACAACCATCATGTGCCACATCCGGCGATGGCCTGTCCGAGGGCCTCATTTGGTTAACGTCGAACCATAAGTTATGAGAATCGTAATCGAGCATTTTCTTATATGTATGTATATGGCATGTATTATTCGAAGCGAAGCAAAAGCGAAAATATTCTATTTTATTTA 44 15324381 0.982028839 22 44 322 1 1.73239376 0.240740741 0.181818182 0.333333333 44 0 0 54 2R:15324188-15324432 6 Arf51F FBtr0087378|FBtr0087375|FBtr0087377|FBtr0087379|FBtr0087376 15324343|15324343|15324343|15324343|15324343 15324892|15325490|15324892|15324892|15324892 ATTCGA 6mer3-8 dme-miR-986-5p 2R + 15324360 15324406 3'utr Arf51F FlyBase G12210.1 ATTTTCTTATATGTATGTATATGGCATGTATTATTCGAAGCGAAGCA 14 15324381 0.962592614 6 11 123 0.857142857 0.77815125 0.333333333 0.357142857 0.571428571 14 1 2 18 2R:15324360-15324406 6 12.5 1032 FBgn0013750 5123.97 471.35 724.4566667 0.002439515 0.026519571 0.01725431 11 11 11 0.15 dme-miR-304-5p 7mer-A1 GAGATTA 2R 15324693 15324699 + 2R_15324693_15324699_+ 0.823349095 0.823135064 0.82324208 0.000151321 Arf51F FBtr0087379|FBtr0087376|FBtr0087375|FBtr0087377|FBtr0087378 15324343|15324343|15324343|15324343|15324343 15324892|15324892|15325490|15324892|15324892 2R + 15324624 15324718 3'utr Arf51F FlyBase G16089.1 AAGCAGCCGGTAAATATCCGTAAAGTAAATTATGCGTGAAGCACAGAGACATAAAGCAAAACATCAACGGAGATTAGCCTTAAGTAAGTTTTTCT 21 15324698 0.958424837 9 20 97 0.966666667 1.161368002 0.066666667 0.285714286 0.5 21 0 1 29 2R:15324624-15324718 7 Arf51F FBtr0087378|FBtr0087375|FBtr0087377|FBtr0087379|FBtr0087376 15324343|15324343|15324343|15324343|15324343 15324892|15325490|15324892|15324892|15324892 GAGATTA 7mer-A1 dme-miR-304-5p 2R + 15324630 15324712 3'utr Arf51F FlyBase G12211.1 CCGGTAAATATCCGTAAAGTAAATTATGCGTGAAGCACAGAGACATAAAGCAAAACATCAACGGAGATTAGCCTTAAGTAAGT 12 15324697 0.951630036 6 11 46 0.956521739 1.041392685 0.173913043 0.583333333 0.782608696 12 0 1 22 2R:15324630-15324712 7 11.5 1033 FBgn0013750 5123.97 471.35 724.4566667 0.002244353 0.024398006 0.015873965 -5 -4 -4.5 0.15 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2R 15324786 15324791 + 2R_15324786_15324791_+ 0.872585388 0.940254092 0.90641974 0.047848997 Arf51F FBtr0087379|FBtr0087376|FBtr0087375|FBtr0087377|FBtr0087378 15324343|15324343|15324343|15324343|15324343 15324892|15324892|15325490|15324892|15324892 2R + 15324758 15324806 3'utr Arf51F FlyBase G16090.1 AAGCTTGTTTATTGCAACTGTTACTATATTTGACTTGAGCAAGGGTGTA 6 15324787 0.994060431 4 4 45 0.555555556 0.698970004 0.333333333 0.5 0.666666667 6 4 0 5 2R:15324758-15324806 6 Arf51F FBtr0087378|FBtr0087375|FBtr0087377|FBtr0087379|FBtr0087376 15324343|15324343|15324343|15324343|15324343 15324892|15325490|15324892|15324892|15324892 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2R + 15324738 15324804 3'utr Arf51F FlyBase G12212.1 ACACGTAAGCAATAAGTTGAAAGCTTGTTTATTGCAACTGTTACTATATTTGACTTGAGCAAGGGTG 10 15324769 0.986719804 7 9 81 0.916666667 1.041392685 0.25 0.2 0.333333333 10 1 0 11 2R:15324738-15324804 6 5 1034 FBgn0013750 5123.97 471.35 724.4566667 0.000975806 0.010607829 0.006901724 -1 17 8 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 15367647 15367653 + 2R_15367647_15367653_+ 0.617770745 0.630614649 0.624192697 0.009082009 unc-5 FBtr0087382|FBtr0339998 15367154|15367154 15368300|15368300 2R + 15367607 15367706 3'utr unc-5 FlyBase G16103.1 AAGTGTAGCTGTAGTCATAGTCACTAAGTTACTGTAGTGTTGTGTTCTAAGGTAACTTGCTCAACGAACTTTGTTCCCTATGGGTGCCATGCATTTTATA 26 15367646 0.735667145 14 24 230 0.9375 1.477121255 0.1875 0.153846154 0.3125 26 2 0 30 2R:15367607-15367706 7 unc-5 FBtr0339998|FBtr0087382 15367154|15367154 15368300|15368300 TGTGTTC 7mer-m8 dme-miR-317-3p 2R + 15367606 15367739 3'utr unc-5 FlyBase G12222.1 AAAGTGTAGCTGTAGTCATAGTCACTAAGTTACTGTAGTGTTGTGTTCTAAGGTAACTTGCTCAACGAACTTTGTTCCCTATGGGTGCCATGCATTTTATACACTAAACAGGAAGAATGTAGCGTTTAATTATA 27 15367646 0.771039974 15 24 231 0.95 1.579783597 0.15 0.481481481 0.65 27 2 0 38 2R:15367606-15367739 7 10.5 1035 FBgn0034013 1156.016667 26.96666667 41.28333333 0.009082914 0.389369592 0.254339927 1 1 1 0.15 dme-miR-12-5p 7mer-A1 ATACTCA 2R 15368156 15368162 + 2R_15368156_15368162_+ 0.629904298 0.469495575 0.549699937 0.11342608 unc-5 FBtr0087382|FBtr0339998 15367154|15367154 15368300|15368300 2R + 15368143 15368223 3'utr unc-5 FlyBase G16108.1 TAGTTTGTTAGACATACTCAAGTGATAACCTTTGTATTTGTCTTTAGATGTAAGTCTGATCCTGTCGTTTAATCGTTAATC 32 15368185 0.864630377 15 30 311 0.945945946 1.544068044 0.189189189 0.125 0.243243243 32 2 0 35 2R:15368143-15368223 7 unc-5 FBtr0339998|FBtr0087382 15367154|15367154 15368300|15368300 ATACTCA 7mer-A1 dme-miR-12-5p 2R + 15368132 15368214 3'utr unc-5 FlyBase G12224.1 AACAAAACGAGTAGTTTGTTAGACATACTCAAGTGATAACCTTTGTATTTGTCTTTAGATGTAAGTCTGATCCTGTCGTTTAA 28 15368185 0.991252161 16 24 250 0.808510638 1.102662342 0.212765957 0.464285714 0.680851064 28 7 2 38 2R:15368132-15368214 7 10 1036 FBgn0034013 1156.016667 26.96666667 41.28333333 0.008650394 0.370828183 0.242228502 -29 -29 -29 0.15 dme-miR-1007-3p 6mer3-8 TGAGCT 2R 15386600 15386605 + 2R_15386600_15386605_+ 0.96231595 0.971102323 0.966709137 0.006212923 SRPK FBtr0087385|FBtr0087384 15385390|15385390 15387851|15387851 2R + 15386575 15386621 3'utr SRPK FlyBase G16125.1 GTATATGTACATGGATGCAGAAACTTGAGCTGAACATAACAATAATG 14 15386600 0.806709942 3 14 71 1 1.204119983 0.3125 0.071428571 0.1875 14 0 0 16 2R:15386575-15386621 6 SRPK FBtr0087385|FBtr0087384 15385390|15385390 15387851|15387851 TGAGCT 6mer3-8 dme-miR-1007-3p 2R + 15386579 15386614 3'utr SRPK FlyBase G12235.1 ATGTACATGGATGCAGAAACTTGAGCTGAACATAAC 9 15386600 0.720080549 3 9 36 1 1.204119983 0 0.333333333 0.625 9 0 0 16 2R:15386579-15386614 6 11 1037 FBgn0026370 1940.296667 50.52 77.84666667 0.005669236 0.21773555 0.141303417 0 0 0 0.15 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 2R 15387573 15387578 + 2R_15387573_15387578_+ 0.529109692 0.529520331 0.529315012 0.000290338 SRPK FBtr0087385|FBtr0087385|FBtr0087384|FBtr0087384 15385390|15385390|15385390|15385390 15387851|15387851|15387851|15387851 2R + 15387565 15387603 3'utr SRPK FlyBase G16130.1 TTCGAAAATACTTACGCATATACTCTTTGAAAATCGCCC 12 15387576 0.93515922 3 11 87 0.923076923 1.079181246 0 0.083333333 0.153846154 12 1 0 12 2R:15387565-15387603 6 SRPK FBtr0087385|FBtr0087385|FBtr0087384|FBtr0087384 15385390|15385390|15385390|15385390 15387851|15387851|15387851|15387851 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 2R + 15387530 15387597 3'utr SRPK FlyBase G12236.1 TAAAGAAAATTCAATAATCTTCGGCTGGCCGATGTTTCGAAAATACTTACGCATATACTCTTTGAAAA 7 15387576 0.979581991 2 7 52 1 1.041392685 0.181818182 0.571428571 0.727272727 7 0 0 11 2R:15387530-15387597 6 8 1038 FBgn0026370 1940.296667 50.52 77.84666667 0.004123081 0.158353127 0.102766121 -3 -3 -3 0.15 dme-miR-8-3p 6mer3-8 CAGTAT 2R 15387745 15387750 + 2R_15387745_15387750_+ 0.994627934 0.987623496 0.991125715 0.004952859 SRPK FBtr0087385|FBtr0087384 15385390|15385390 15387851|15387851 2R + 15387718 15387774 3'utr SRPK FlyBase G16131.1 AGGAACCCAGCTGCCGAATTGCAATTCCAGTATGTTCTCACGCTTTCAAAGAGTATA 12 15387750 0.987288356 8 11 94 0.923076923 0.77815125 0.153846154 0.083333333 0.153846154 12 0 1 12 2R:15387718-15387774 6 SRPK FBtr0087385|FBtr0087384 15385390|15385390 15387851|15387851 CAGTAT 6mer3-8 dme-miR-8-3p 2R + 15387726 15387775 3'utr SRPK FlyBase G12237.1 AGCTGCCGAATTGCAATTCCAGTATGTTCTCACGCTTTCAAAGAGTATAA 7 15387743 0.977105951 6 7 61 1 1.041392685 0.181818182 0.428571429 0.636363636 7 0 0 11 2R:15387726-15387775 6 9 1039 FBgn0026370 1940.296667 50.52 77.84666667 0.004638466 0.178147268 0.115611887 -5 2 -1.5 0.15 dme-miR-1012-3p 7mer-A1 TGACTAA 2R 15515073 15515079 + 2R_15515073_15515079_+ 0.822962564 0.823349431 0.823155997 0.000273509 GalNAc-T1 FBtr0340001|FBtr0087332|FBtr0087331 15515017|15515017|15515017 15515597|15515597|15515597 2R + 15515013 15515099 stop_codon GalNAc-T1 FlyBase G16135.1 CACTGAGGAGATAGGGTGTAGCGGGGGAATGGGATGGGGACCAAAGCAACTGAGAGATACTGACTAACGCCGACTGAACGGAACTCG 77 15515070 0.936978837 8 67 256 0.894117647 1.579783597 0.305882353 0.077922078 0.164705882 77 8 1 76 2R:15515013-15515099 7 GalNAc-T1 FBtr0087331|FBtr0087332|FBtr0340001 15515017|15515017|15515017 15515597|15515597|15515597 TGACTAA 7mer-A1 dme-miR-1012-3p 2R + 15515055 15515105 3'utr GalNAc-T1 FlyBase G12239.1 AAAGCAACTGAGAGATACTGACTAACGCCGACTGAACGGAACTCGAATTCA 51 15515070 0.738278793 6 47 157 0.931034483 1.431363764 0.252873563 0.509803922 0.712643678 51 4 2 81 2R:15515055-15515105 7 60.5 1040 FBgn0034025 414.2533333 21.30666667 32.93666667 0.146045898 2.839486859 1.836858618 3 3 3 0.15 dme-miR-11-3p 7mer-m1 TGTGATG 2R 15517768 15517774 - 2R_15517768_15517774_- 0.535593558 0.535593563 0.53559356 0 Khc-73 FBtr0329957|FBtr0087357|FBtr0329956|FBtr0329955|FBtr0346265 15517705|15517705|15515776|15517705|15517705 15518577|15518751|15518751|15518751|15518751 2R - 15517747 15517797 3'utr Khc-73 FlyBase G23622.1 ATGTGTAAATTGTATTATTTTGATGTGATGTATTTATAATTTCCCTTTATA 55 15517779 0.662314028 12 50 715 0.904761905 1.755874856 0.222222222 0.145454545 0.253968254 55 6 0 57 2R:15517747-15517797 7 Khc-73 FBtr0329955|FBtr0346265|FBtr0087357|FBtr0329956|FBtr0329957 15517705|15517705|15517705|15515776|15517705 15518751|15518751|15518751|15518751|15518577 TGTGATG 7mer-m1 dme-miR-11-3p 2R - 15517754 15517813 3'utr Khc-73 FlyBase G17883.1 CGCACCGTCGCAGTTAATGTGTAAATTGTATTATTTTGATGTGATGTATTTATAATTTCC 46 15517778 0.619482257 9 42 572 0.920634921 1.286306739 0.174603175 0.282608696 0.476190476 46 3 2 58 2R:15517754-15517813 7 46.5 1041 FBgn0019968 1323.716667 22.35333333 34.32 0.035128363 2.080226663 1.354895105 5 4 4.5 0.15 dme-miR-1007-3p 6mer3-8 TGAGCT 2R 15517964 15517969 - 2R_15517964_15517969_- 0.999988807 0.999260702 0.999624755 0.000514844 Khc-73 FBtr0329957|FBtr0087357|FBtr0329956|FBtr0329955|FBtr0346265 15517705|15517705|15515776|15517705|15517705 15518577|15518751|15518751|15518751|15518751 2R - 15517937 15517994 3'utr Khc-73 FlyBase G23623.1 AATTTCGTCTCCATATGACCTTTCCTGAGCTCATTTTCTTTTTAGCGCATTTATATAC 25 15517979 0.990037848 8 24 237 0.96969697 1.505149978 0.03030303 0.24 0.424242424 25 1 0 32 2R:15517937-15517994 6 Khc-73 FBtr0329955|FBtr0346265|FBtr0087357|FBtr0329956|FBtr0329957 15517705|15517705|15517705|15515776|15517705 15518751|15518751|15518751|15518751|15518577 TGAGCT 6mer3-8 dme-miR-1007-3p 2R - 15517946 15518008 3'utr Khc-73 FlyBase G17884.1 TAAGATCTTGCAATAATTTCGTCTCCATATGACCTTTCCTGAGCTCATTTTCTTTTTAGCGCA 12 15517960 0.989103882 8 11 108 1 1.342422681 0.045454545 0.583333333 0.772727273 12 0 0 22 2R:15517946-15518008 6 14 1042 FBgn0019968 1323.716667 22.35333333 34.32 0.010576281 0.626304802 0.407925408 10 -9 0.5 0.15 dme-miR-1007-3p 8mer-A1 TGAGCTTA 2R 15518060 15518067 - 2R_15518060_15518067_- 0.593460994 0.537595359 0.565528176 0.039502945 Khc-73 FBtr0329957|FBtr0087357|FBtr0329956|FBtr0329955|FBtr0346265 15517705|15517705|15515776|15517705|15517705 15518577|15518751|15518751|15518751|15518751 2R - 15518019 15518168 3'utr Khc-73 FlyBase G23624.1 TTCGATTTTGGAATGAAGCGTTTTACTGATATATTTTCTAATGGTTCTTTGCCTTTAGTTTAGTTAAATTGTTTTTGATATCAATGTGACTTGTTTAACGATGAGCTTATATTTTTACTTGTTATTGACTATATTCAATATATTTGTATA 70 15518067 0.993028279 21 65 770 0.93902439 1.886490725 0.243902439 0.1 0.231707317 70 5 0 77 2R:15518019-15518168 8 Khc-73 FBtr0329955|FBtr0346265|FBtr0087357|FBtr0329956|FBtr0329957 15517705|15517705|15517705|15515776|15517705 15518751|15518751|15518751|15518751|15518577 TGAGCTTA 8mer-A1 dme-miR-1007-3p 2R - 15518047 15518098 3'utr Khc-73 FlyBase G17885.1 GTTTTTGATATCAATGTGACTTGTTTAACGATGAGCTTATATTTTTACTTGT 32 15518067 0.888361174 8 31 332 0.977272727 1.633468456 0.5 0.34375 0.522727273 32 1 0 43 2R:15518047-15518098 8 20.5 1043 FBgn0019968 1323.716667 22.35333333 34.32 0.015486698 0.917089174 0.597319347 0 0 0 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 15518195 15518201 - 2R_15518195_15518201_- 0.661467942 0.640811309 0.651139626 0.014606422 Khc-73 FBtr0329957|FBtr0087357|FBtr0329956|FBtr0329955|FBtr0346265 15517705|15517705|15515776|15517705|15517705 15518577|15518751|15518751|15518751|15518751 2R - 15518179 15518219 3'utr Khc-73 FlyBase G23625.1 CTTTTGATTCCATTGTTTTGTGTTCGTGTAGTTAATTGTCG 15 15518202 0.755233482 4 15 228 1 1.230448921 0.176470588 0.133333333 0.235294118 15 0 0 17 2R:15518179-15518219 7 Khc-73 FBtr0329955|FBtr0346265|FBtr0087357|FBtr0329956|FBtr0329957 15517705|15517705|15517705|15515776|15517705 15518751|15518751|15518751|15518751|15518577 TGTGTTC 7mer-m8 dme-miR-317-3p 2R - 15518102 15518215 3'utr Khc-73 FlyBase G17886.1 TGATTCCATTGTTTTGTGTTCGTGTAGTTAATTGTCGTTTTTTGCTTTTCGATTTTGGAATGAAGCGTTTTACTGATATATTTTCTAATGGTTCTTTGCCTTTAGTTTAGTTAA 21 15518202 0.984626508 10 20 248 0.961538462 1.397940009 0.115384615 0.238095238 0.384615385 21 1 0 25 2R:15518102-15518215 7 11 1044 FBgn0019968 1323.716667 22.35333333 34.32 0.008309935 0.49209663 0.320512821 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 15562855 15562861 - 2R_15562855_15562861_- 0.754137827 0.753987021 0.754062424 0.000106632 CG8195 FBtr0087353|FBtr0087353|FBtr0087353 15562695|15562695|15562695 15563163|15563163|15563163 2R - 15562828 15562887 3'utr CG8195 FlyBase G23655.2 TAGATCCCACGAATACCGTTTATCTATGTGATAGTCTACAACGTTTTGCTGAACTCCACC 22 15562865 0.989705506 6 18 194 0.888888889 1.380211242 0.481481481 0.227272727 0.37037037 22 3 0 24 2R:15562828-15562887 7 CG8195 FBtr0087353|FBtr0087353|FBtr0087353 15562695|15562695|15562695 15563163|15563163|15563163 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 15562848 15562890 3'utr CG8195 FlyBase G17905.1 CTTTAGATCCCACGAATACCGTTTATCTATGTGATAGTCTACA 17 15562864 0.992582069 3 13 153 0.8 1 0.44 0.411764706 0.6 17 4 1 20 2R:15562848-15562890 7 17 1045 FBgn0034032 150.0733333 7.953333333 12.14666667 0.113277953 2.137468567 1.399560922 4 3 3.5 0.15 dme-miR-965-3p 6mer3-8 TACGCT 2R 15566490 15566495 - 2R_15566490_15566495_- 0.991392475 0.998117083 0.994754779 0.00475501 Flo1 FBtr0087351|FBtr0087352 15566269|15566269 15566573|15566573 2R - 15566438 15566514 3'utr Flo1 FlyBase G23661.1 AAGAAAACAAAAAAGAAATTACGCTATATTGAACGATCGAATACTTCAAAACTGAAATCGAACGCATTTAAATTTCT 34 15566496 0.96756181 6 32 177 0.955555556 1.633468456 0.022222222 0.235294118 0.422222222 34 2 0 43 2R:15566438-15566514 6 Flo1 FBtr0087351|FBtr0087352 15566269|15566269 15566573|15566573 TACGCT 6mer3-8 dme-miR-965-3p 2R - 15566457 15566508 3'utr Flo1 FlyBase G17910.1 ACAAAAAAGAAATTACGCTATATTGAACGATCGAATACTTCAAAACTGAAAT 26 15566495 0.929498394 5 25 135 0.96969697 1.505149978 0.03030303 0.230769231 0.393939394 26 1 0 32 2R:15566457-15566508 6 27.5 1046 FBgn0024754 1484.76 99.31333333 151.9633333 0.018521512 0.27690139 0.180964706 1 0 0.5 0.15 dme-miR-1007-3p 6mer3-8 TGAGCT 2R 15569895 15569900 - 2R_15569895_15569900_- 0.999671031 0.97493909 0.987305061 0.017488094 Cdk5 FBtr0087350 15569526 15570131 2R - 15569873 15569934 3'utr Cdk5 FlyBase G23670.1 AATCCCTACCAATGTGACACTTAATATAGCCATTTGAGCTGCCAAATTAACATTTATCGATA 30 15569901 0.964499519 7 29 199 0.947368421 1.556302501 0.026315789 0.266666667 0.421052632 30 2 0 36 2R:15569873-15569934 6 Cdk5 FBtr0087350 15569526 15570131 TGAGCT 6mer3-8 dme-miR-1007-3p 2R - 15569884 15569935 3'utr Cdk5 FlyBase G17916.1 CAATCCCTACCAATGTGACACTTAATATAGCCATTTGAGCTGCCAAATTAAC 17 15569901 0.968412684 4 16 94 1 1.414973348 0.038461538 0.5 0.692307692 16 0 0 26 2R:15569884-15569935 6 20 1047 FBgn0013762 182.3333333 13.78 20.92333333 0.109689214 1.45137881 0.955870639 1 1 1 0.15 dme-miR-14-3p 7mer-A1 AGACTGA 2R 15572953 15572959 + 2R_15572953_15572959_+ 0.816505655 0.79541909 0.805962372 0.014910478 CG30466 FBtr0340004|FBtr0087339 15572925|15572925 15573170|15573170 2R + 15572941 15572964 3'utr CG30466 FlyBase G16152.1 GAACGAAGCTGTAGACTGATGACT 23 15572960 0.649982143 3 22 73 0.970588235 1.217483944 0.029411765 0.347826087 0.558823529 23 0 1 33 2R:15572941-15572964 7 CG30466 FBtr0087339|FBtr0340004 15572925|15572925 15573170|15573170 AGACTGA 7mer-A1 dme-miR-14-3p 2R + 15572941 15572965 3'utr CG30466 FlyBase G12258.1 GAACGAAGCTGTAGACTGATGACTA 18 15572960 0.660615026 3 17 64 0.928571429 0.937852093 0 0.5 0.678571429 18 0 2 26 2R:15572941-15572965 7 20 1048 FBgn0050466 280.3266667 17.32333333 26.4 0.071345335 1.154512219 0.757575758 -7 -7 -7 0.15 dme-miR-92b-3p 7mer-m1 TGCAATT 2R 15763056 15763062 - 2R_15763056_15763062_- 0.424424491 0.765586656 0.595005574 0.241238105 Zasp52 FBtr0310088|FBtr0301313|FBtr0310087|FBtr0310086|FBtr0329913|FBtr0329915|FBtr0111048|FBtr0100387|FBtr0087315|FBtr0329914|FBtr0329916|FBtr0342711|FBtr0100388|FBtr0329912|FBtr0329911 15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563 15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192 2R - 15763027 15763123 3'utr Zasp52 FlyBase G23686.1 AGAATCTTCGGATTACTTGGATACGGGAGCTTGCTCCCAACTCGTATCTAATGCTTATTATTGCAATTGTCAGAGTGAATAATGCGTAACTATTATT 15 15763069 0.976960763 9 15 108 1 1.204119983 0.125 0.066666667 0.125 15 0 0 16 2R:15763027-15763123 7 Zasp52 FBtr0329912|FBtr0100387|FBtr0329911|FBtr0329913|FBtr0329916|FBtr0310087|FBtr0100388|FBtr0310088|FBtr0329915|FBtr0111048|FBtr0087315|FBtr0329914|FBtr0301313|FBtr0342711|FBtr0310086 15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563|15762563 15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192|15763192 TGCAATT 7mer-m1 dme-miR-92b-3p 2R - 15763033 15763109 3'utr Zasp52 FlyBase G17924.1 ACTTGGATACGGGAGCTTGCTCCCAACTCGTATCTAATGCTTATTATTGCAATTGTCAGAGTGAATAATGCGTAACT 12 15763066 0.963067202 9 11 81 0.9 1.255272505 0.05 0.583333333 0.75 12 2 0 18 2R:15763033-15763109 7 6 1049 FBgn0265991 371.52 11.31333333 17.32 0.016149871 0.530347672 0.346420323 7 4 5.5 0.15 dme-miR-980-3p 6mer2-7 GCAGCT 2R 15854293 15854298 + 2R_15854293_15854298_+ 0.94810524 0.842469456 0.895287348 0.07469572 tun FBtr0308815|FBtr0308814 15853194|15853194 15854981|15855645 2R + 15854222 15854325 3'utr tun FlyBase G16210.1 CGTATCGTTTCCCCTTCGATTAATGACTTGTGACGCGCAAAGACTGATTCATTATACGCCCTACGGTAGCTGCAGCTCCTCTTCAAATGCCTCCTCGTGTTTTA 37 15854292 0.746358424 14 32 226 0.886363636 1.591064607 0.113636364 0.162162162 0.295454545 37 5 0 39 2R:15854222-15854325 6 tun FBtr0308815|FBtr0308814 15853194|15853194 15854981|15855645 GCAGCT 6mer2-7 dme-miR-980-3p 2R + 15854222 15854305 3'utr tun FlyBase G12305.1 CGTATCGTTTCCCCTTCGATTAATGACTTGTGACGCGCAAAGACTGATTCATTATACGCCCTACGGTAGCTGCAGCTCCTCTTC 17 15854269 0.972673941 6 15 97 0.923076923 1.079181246 0.076923077 0.352941176 0.576923077 17 1 1 24 2R:15854222-15854305 6 9.5 1050 FBgn0034046 647.0966667 28.77333333 44.19 0.01468096 0.330166821 0.214980765 1 24 12.5 0.15 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 15854560 15854565 + 2R_15854560_15854565_+ 0.990353936 0.964669433 0.977511684 0.018161684 tun FBtr0308815|FBtr0308814 15853194|15853194 15854981|15855645 2R + 15854550 15854581 3'utr tun FlyBase G16212.1 AAAAATAAATGCTGTGCAAAAGTCTCAAAGTT 7 15854559 0.76654153 3 7 34 1 1 0.1 0.428571429 0.6 7 0 0 10 2R:15854550-15854581 6 tun FBtr0308815|FBtr0308814 15853194|15853194 15854981|15855645 GCTGTG 6mer2-7 dme-miR-1008-3p 2R + 15854545 15854600 3'utr tun FlyBase G12307.1 TGTATAAAAATAAATGCTGTGCAAAAGTCTCAAAGTTAAACCTAAACTCTTAATTA 10 15854559 0.960943703 2 10 53 1 1.146128036 0.142857143 0.3 0.5 10 0 0 14 2R:15854545-15854600 6 7.5 1051 FBgn0034046 647.0966667 28.77333333 44.19 0.011590231 0.260658017 0.169721656 1 1 1 0.15 dme-miR-317-3p 8mer-A1 TGTGTTCA 2R 15869650 15869657 - 2R_15869650_15869657_- 0.62824775 0.628244911 0.628246331 1.98E-06 sli FBtr0330732 15869493 15873378 2R - 15869633 15869703 3'utr sli FlyBase G23755.1 TTAACCTTTTTCCGGCGAAGCTTTCGACGGTTCACAGCCGCAAAATTGTGTTCAGCTAATTAATTAGGAAG 74 15869658 0.907520099 4 67 494 0.892857143 1.397940009 0.083333333 0.121621622 0.226190476 74 7 2 75 2R:15869633-15869703 8 sli FBtr0330732 15869493 15873378 TGTGTTCA 8mer-A1 dme-miR-317-3p 2R - 15869632 15869699 3'utr sli FlyBase G17980.1 CCTTTTTCCGGCGAAGCTTTCGACGGTTCACAGCCGCAAAATTGTGTTCAGCTAATTAATTAGGAAGA 38 15869658 0.979534386 4 36 242 0.967741935 1.477121255 0.14516129 0.394736842 0.629032258 38 1 1 60 2R:15869632-15869699 8 53.5 1052 FBgn0264089 1642.536667 21.12333333 32.62 0.032571571 2.532744201 1.640098099 1 1 1 0.15 dme-miR-8-3p 6mer2-7 AGTATT 2R 15870380 15870385 - 2R_15870380_15870385_- 0.990277008 1 0.995138504 0.006875199 sli FBtr0330730|FBtr0330729|FBtr0330733|FBtr0330732|FBtr0330734|FBtr0330731 15870052|15870052|15870052|15869493|15870052|15870052 15873378|15873378|15873378|15873378|15871419|15873378 2R - 15870322 15870411 3'utr sli FlyBase G23762.1 TTTAGTCTAAGTTGCTCAAAGGATAAAGTATTTTGATAGAACCGGAAAGGATCGAGAAACAAACCAATAAACCACAAAGAATCGAATTGA 11 15870380 0.964979251 6 10 49 0.923076923 1.079181246 0.307692308 0.181818182 0.307692308 11 1 0 12 2R:15870322-15870411 6 sli FBtr0330734|FBtr0330731|FBtr0330733|FBtr0330732|FBtr0330730|FBtr0330729 15870052|15870052|15870052|15869493|15870052|15870052 15871419|15873378|15873378|15873378|15873378|15873378 AGTATT 6mer2-7 dme-miR-8-3p 2R - 15870356 15870411 3'utr sli FlyBase G17985.1 TTTAGTCTAAGTTGCTCAAAGGATAAAGTATTTTGATAGAACCGGAAAGGATCGAG 8 15870376 0.970534642 6 8 45 1 1.113943352 0 0.5 0.692307692 8 0 0 13 2R:15870356-15870411 6 4.5 1053 FBgn0264089 1642.536667 21.12333333 32.62 0.002739665 0.213034559 0.137952177 -5 -9 -7 0.15 dme-miR-282-5p 6mer2-7 GAGGCT 2R 15871318 15871323 - 2R_15871318_15871323_- 0.97792995 0.933056837 0.955493394 0.031730144 sli FBtr0330730|FBtr0330729|FBtr0330733|FBtr0330732|FBtr0330734|FBtr0330731 15870052|15870052|15870052|15869493|15870052|15870052 15873378|15873378|15873378|15873378|15871419|15873378 2R - 15871294 15871366 3'utr sli FlyBase G23768.1 AATCCCCGTTTCCTGCATCGTCATGATCATCATGCAGTCTATGGAGGCTGGCTAGCTGCCTTCGGGATGCAAG 60 15871325 0.834554045 5 59 393 0.985294118 1.826074803 0.147058824 0.1 0.205882353 60 1 0 67 2R:15871294-15871366 6 sli FBtr0330734|FBtr0330731|FBtr0330733|FBtr0330732|FBtr0330730|FBtr0330729 15870052|15870052|15870052|15869493|15870052|15870052 15871419|15873378|15873378|15873378|15873378|15873378 GAGGCT 6mer2-7 dme-miR-282-5p 2R - 15871242 15871393 3'utr sli FlyBase G17990.1 TGTCGAATGCCCCACATCCCCCCACCCAATCCCCGTTTCCTGCATCGTCATGATCATCATGCAGTCTATGGAGGCTGGCTAGCTGCCTTCGGGATGCAAGGTCCTTCTTCTACTACTAGCACTCATATACTCGAATATATACTCGTACTCGT 51 15871325 0.973084258 12 51 311 1 1.913813852 0.146341463 0.392156863 0.62195122 51 0 0 82 2R:15871242-15871393 6 33.5 1054 FBgn0264089 1642.536667 21.12333333 32.62 0.020395283 1.585923939 1.026977315 2 2 2 0.15 dme-miR-305-5p 7mer-m8 AGTACAA 2R 15871415 15871421 - 2R_15871415_15871421_- 0.607015381 0.618646074 0.612830727 0.008224147 sli FBtr0330730|FBtr0330729|FBtr0330733|FBtr0330732|FBtr0330731 15870052|15870052|15870052|15869493|15870052 15873378|15873378|15873378|15873378|15873378 2R - 15871399 15871452 stop_codon sli FlyBase G23769.1 ATCCTCGATCAGCTGCGCATGATGCACTGGTAGTACAACAAGGGGGATTCGATT 89 15871422 0.789959357 6 82 461 0.915789474 1.638489257 0.231578947 0.06741573 0.126315789 89 7 1 87 2R:15871399-15871452 7 sli FBtr0330731|FBtr0330733|FBtr0330732|FBtr0330730|FBtr0330729 15870052|15870052|15869493|15870052|15870052 15873378|15873378|15873378|15873378|15873378 AGTACAA 7mer-m8 dme-miR-305-5p 2R - 15871400 15871442 stop_codon sli FlyBase G17991.1 AGCTGCGCATGATGCACTGGTAGTACAACAAGGGGGATTCGAT 26 15871422 0.760137251 4 23 123 0.918918919 1.531478917 0.243243243 0.346153846 0.540540541 26 3 0 34 2R:15871400-15871442 7 55 1055 FBgn0264089 1642.536667 21.12333333 32.62 0.033484793 2.60375572 1.686082158 1 1 1 0.15 dme-bantam-3p 6mer2-7 GATCTC 2R 15873130 15873135 - 2R_15873130_15873135_- 1 0.998961008 0.999480504 0.000734684 sli FBtr0330730|FBtr0330729|FBtr0330733|FBtr0330732|FBtr0330731 15870052|15870052|15870052|15869493|15870052 15873378|15873378|15873378|15873378|15873378 2R - 15873057 15873284 3'utr sli FlyBase G23772.1 ATAGTAACGATAGTCTTAGCCATAGCACTAGGGATAGCACGGATGTTAGGGGGACGAAGGATGAAGCGGAGGAGAGTGCTGACGCGGGGGAGACAACGGAGGAGGTGAGGGACGAGAGTGATGATTACCCCACGGACGGCATGCAGTCCGATCTCTACGACGACACCATCGATGACGACGATGACGATGGTCTCGATGATGATTATGCAGACGAGGAGGATGGGGAGG 92 15873129 0.999981595 19 79 374 0.866071429 1.032529225 0.160714286 0.173913043 0.321428571 92 7 8 97 2R:15873057-15873284 6 sli FBtr0330731|FBtr0330733|FBtr0330732|FBtr0330730|FBtr0330729 15870052|15870052|15869493|15870052|15870052 15873378|15873378|15873378|15873378|15873378 GATCTC 6mer2-7 dme-bantam-3p 2R - 15873120 15873159 3'utr sli FlyBase G17993.1 TACCCCACGGACGGCATGCAGTCCGATCTCTACGACGACA 20 15873129 0.855016061 4 16 80 0.838709677 1.414973348 0.032258065 0.3 0.548387097 20 5 0 26 2R:15873120-15873159 6 33 1056 FBgn0264089 1642.536667 21.12333333 32.62 0.020090876 1.562253432 1.011649295 -6 -6 -6 0.15 dme-miR-1012-3p 6mer2-7 TGACTA 2R 15936199 15936204 - 2R_15936199_15936204_- 0.85955509 0.855347039 0.857451065 0.002975576 Mlf FBtr0087292|FBtr0306650|FBtr0302149|FBtr0087294|FBtr0087295|FBtr0087293|FBtr0306649 15935891|15935891|15935891|15935891|15935891|15935891|15936089 15936459|15936459|15937286|15936459|15936459|15938254|15936459 2R - 15936183 15936256 3'utr Mlf FlyBase G23841.1 GATGTGCACGCAGGATACAGAACAACTTGCTTAAATTTACTTAAAACAAATGTGACTATTCAACGCCGAAATCA 26 15936199 0.675114678 9 23 128 0.931034483 1.431363764 0.275862069 0.076923077 0.172413793 26 2 0 27 2R:15936183-15936256 6 Mlf FBtr0087293|FBtr0306649|FBtr0087294|FBtr0087295|FBtr0306650|FBtr0302149|FBtr0087292 15935891|15936089|15935891|15935891|15935891|15935891|15935891 15938254|15936459|15936459|15936459|15936459|15937286|15936459 TGACTA 6mer2-7 dme-miR-1012-3p 2R - 15936182 15936256 3'utr Mlf FlyBase G18057.1 GATGTGCACGCAGGATACAGAACAACTTGCTTAAATTTACTTAAAACAAATGTGACTATTCAACGCCGAAATCAT 15 15936200 0.960857502 6 14 75 1 1.431363764 0.222222222 0.666666667 0.814814815 15 0 0 27 2R:15936182-15936256 6 14.5 1057 FBgn0034051 2421.99 180.2466667 275.5966667 0.005986812 0.080445316 0.052613118 -5 -4 -4.5 0.15 dme-miR-970-3p 6mer3-8 TCTTAT 2R 15936314 15936319 - 2R_15936314_15936319_- 0.998140605 0.998134291 0.998137448 4.45E-06 Mlf FBtr0087292|FBtr0306650|FBtr0302149|FBtr0087294|FBtr0087295|FBtr0087293|FBtr0306649 15935891|15935891|15935891|15935891|15935891|15935891|15936089 15936459|15936459|15937286|15936459|15936459|15938254|15936459 2R - 15936305 15936346 3'utr Mlf FlyBase G23842.1 AACAAACACAATTCTTTACCAGTTCTGTCTTATCCTGCGTGA 14 15936324 0.947104158 5 9 127 0.777777778 0.84509804 0 0.142857143 0.333333333 14 3 1 14 2R:15936305-15936346 6 Mlf FBtr0087293|FBtr0306649|FBtr0087294|FBtr0087295|FBtr0306650|FBtr0302149|FBtr0087292 15935891|15936089|15935891|15935891|15935891|15935891|15935891 15938254|15936459|15936459|15936459|15936459|15937286|15936459 TCTTAT 6mer3-8 dme-miR-970-3p 2R - 15936304 15936337 3'utr Mlf FlyBase G18058.1 AATTCTTTACCAGTTCTGTCTTATCCTGCGTGAG 10 15936317 0.606502231 3 10 91 1 1.146128036 0 0.4 0.571428571 10 0 0 14 2R:15936304-15936337 6 11 1058 FBgn0034051 2421.99 180.2466667 275.5966667 0.00454172 0.061027481 0.0399134 5 -2 1.5 0.15 dme-miR-7-5p 6mer3-8 GTCTTC 2R 15937182 15937187 - 2R_15937182_15937187_- 0.778775933 0.985853556 0.882314745 0.146426046 Mlf FBtr0306651|FBtr0302149 15936692|15935891 15937286|15937286 2R - 15937145 15937210 3'utr Mlf FlyBase G23844.1 CGAGAAACACTCGACATTCGGCTGTCTTCGACGTAACTACATGCACTCTACTAACCGAAGGCGCCA 11 15937184 0.971439361 5 11 63 1 1.176091259 0.266666667 0.363636364 0.533333333 11 0 0 15 2R:15937145-15937210 6 Mlf FBtr0302149|FBtr0306651 15935891|15936692 15937286|15937286 GTCTTC 6mer3-8 dme-miR-7-5p 2R - 15937153 15937209 3'utr Mlf FlyBase G18060.1 GAGAAACACTCGACATTCGGCTGTCTTCGACGTAACTACATGCACTCTACTAACCGA 9 15937184 0.975207404 4 8 51 0.923076923 1.079181246 0.153846154 0.333333333 0.538461538 9 1 0 12 2R:15937153-15937209 6 8.5 1059 FBgn0034051 2421.99 180.2466667 275.5966667 0.003509511 0.047157599 0.030842173 -3 -3 -3 0.15 dme-miR-252-5p 7mer-m8 GTACTTA 2R 15989698 15989704 - 2R_15989698_15989704_- 0.472335506 0.568844362 0.520589934 0.068242098 CG8314 FBtr0087268 15989681 15989940 2R - 15989685 15989736 3'utr CG8314 FlyBase G23862.1 AAATATCCATTTCCGTGGCCGGGTGAAGATGTGTACTTACCTGACAGCCCTA 21 15989702 0.973605614 4 20 126 1 1.397940009 0.36 0.19047619 0.32 21 0 0 25 2R:15989685-15989736 7 CG8314 FBtr0087268 15989681 15989940 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 15989683 15989727 3'utr CG8314 FlyBase G18068.1 TTTCCGTGGCCGGGTGAAGATGTGTACTTACCTGACAGCCCTACT 17 15989705 0.706773237 6 16 109 0.896551724 1.414973348 0.344827586 0.529411765 0.724137931 17 3 0 26 2R:15989683-15989727 7 17.5 1060 FBgn0034057 362 35.10666667 54.10333333 0.048342541 0.49848082 0.323455117 -2 1 -0.5 0.15 dme-miR-965-3p 8mer-A1 TACGCTTA 2R 15993469 15993476 + 2R_15993469_15993476_+ 0.619661368 0.421373723 0.520517545 0.140210577 CG8320 FBtr0087202 15993411 15993707 2R + 15993435 15993491 3'utr CG8320 FlyBase G16233.1 GGTGGTTAAGGGGTTCCTGGTTTTAATGAGATTCTACGCTTAGTTGTGTGTGCGTTT 18 15993461 0.737970341 8 17 175 0.952380952 1 0.142857143 0.111111111 0.238095238 18 0 1 20 2R:15993435-15993491 8 CG8320 FBtr0087202 15993411 15993707 TACGCTTA 8mer-A1 dme-miR-965-3p 2R + 15993442 15993490 3'utr CG8320 FlyBase G12324.1 AAGGGGTTCCTGGTTTTAATGAGATTCTACGCTTAGTTGTGTGTGCGTT 14 15993461 0.822717235 6 12 145 0.842105263 1.204119983 0.421052632 0.285714286 0.473684211 14 3 0 16 2R:15993442-15993490 8 13 1061 FBgn0034059 68.78 8.71 13.22666667 0.189008433 1.492537313 0.982862903 8 8 8 0.15 dme-miR-999-3p 6mer3-8 AGTTAA 2R 15994141 15994146 - 2R_15994141_15994146_- 0.99946861 0.999999433 0.999734022 0.000375332 ATPCL FBtr0340016|FBtr0300598|FBtr0300596|FBtr0300597 15993801|15993801|15993801|15993529 15994227|15994227|15994227|15994227 2R - 15994111 15994160 3'utr ATPCL FlyBase G23872.1 TCGGAAGTTGTTGTAGTTAAGCACAGATGTATGATGTTAGGCAAAGAGGT 13 15994150 0.943904136 5 12 76 1 1.176091259 0.266666667 0.153846154 0.266666667 13 0 0 15 2R:15994111-15994160 6 ATPCL FBtr0300597|FBtr0300596|FBtr0300598|FBtr0340016 15993529|15993801|15993801|15993801 15994227|15994227|15994227|15994227 AGTTAA 6mer3-8 dme-miR-999-3p 2R - 15994102 15994164 3'utr ATPCL FlyBase G18076.1 TTATTCGGAAGTTGTTGTAGTTAAGCACAGATGTATGATGTTAGGCAAAGAGGTCACCCGCTC 11 15994124 0.776302388 5 10 74 1 1.176091259 0.333333333 0.272727273 0.466666667 11 0 0 15 2R:15994102-15994164 6 7.5 1062 FBgn0020236 1766.27 52.70333333 80.88666667 0.004246236 0.14230599 0.092722328 4 -22 -9 0.15 dme-miR-307a-3p 7mer-A1 GTTGTGA 2R 16013663 16013669 + 2R_16013663_16013669_+ 0.823022209 0.822186532 0.822604371 0.000590929 CG8389 FBtr0087205|FBtr0087204 16013535|16013535 16013815|16013815 2R + 16013635 16013681 3'utr CG8389 FlyBase G16251.1 TTCCACTCTCGCCGCAGTAGTTATCTGAGTTGTGAGGAAGGACCAGT 10 16013658 0.971705354 6 10 62 1 1.079181246 0.416666667 0.1 0.25 10 0 0 12 2R:16013635-16013681 7 CG8389 FBtr0087205|FBtr0087204 16013535|16013535 16013815|16013815 GTTGTGA 7mer-A1 dme-miR-307a-3p 2R + 16013635 16013687 3'utr CG8389 FlyBase G12335.1 TTCCACTCTCGCCGCAGTAGTTATCTGAGTTGTGAGGAAGGACCAGTGTCAGG 9 16013660 0.96877785 6 9 53 1 1.146128036 0.5 0.444444444 0.642857143 9 0 0 14 2R:16013635-16013687 7 8 1063 FBgn0034063 106.9966667 6.81 10.28666667 0.074768684 1.174743025 0.777705768 5 3 4 0.15 dme-miR-34-5p 7mer-A1 ACTGCCA 2R 16013773 16013779 + 2R_16013773_16013779_+ 0.67515802 0.706794052 0.690976036 0.022370101 CG8389 FBtr0087205|FBtr0087204 16013535|16013535 16013815|16013815 2R + 16013750 16013792 3'utr CG8389 FlyBase G16252.1 TAGCCCCTAGACCTAACTTTTGTACTGCCATAAGAGCCAAAAT 20 16013770 0.915043189 7 19 143 0.956521739 1.041392685 0.043478261 0.15 0.260869565 20 0 1 22 2R:16013750-16013792 7 CG8389 FBtr0087205|FBtr0087204 16013535|16013535 16013815|16013815 ACTGCCA 7mer-A1 dme-miR-34-5p 2R + 16013749 16013789 3'utr CG8389 FlyBase G12336.1 TTAGCCCCTAGACCTAACTTTTGTACTGCCATAAGAGCCAA 15 16013770 0.785004705 5 14 109 0.952380952 1.301029996 0.047619048 0.333333333 0.523809524 15 1 0 20 2R:16013749-16013789 7 17 1064 FBgn0034063 106.9966667 6.81 10.28666667 0.158883454 2.496328928 1.652624757 3 3 3 0.15 dme-miR-79-3p 8mer-A1 TAGCTTTA 2R 16060133 16060140 + 2R_16060133_16060140_+ 0.625364007 0.625364009 0.625364008 0 CG8405 FBtr0340020 16059325 16060835 2R + 16060091 16060163 3'utr CG8405 FlyBase G16263.1 GCCTCCACTGATGCTTCTACTGTTTGCCCAAGCTCTTTGCTTTAGCTTTATGGAATACCATAGGATTGTCAAC 11 16060130 0.991243007 5 9 103 0.9375 1.176091259 0.125 0.272727273 0.5 11 1 0 15 2R:16060091-16060163 8 CG8405 FBtr0340020 16059325 16060835 TAGCTTTA 8mer-A1 dme-miR-79-3p 2R + 16060100 16060174 3'utr CG8405 FlyBase G12340.2 GATGCTTCTACTGTTTGCCCAAGCTCTTTGCTTTAGCTTTATGGAATACCATAGGATTGTCAACTGTAATATATT 11 16060132 0.985149209 7 11 114 1 1.113943352 0.461538462 0.181818182 0.307692308 11 0 0 13 2R:16060100-16060174 8 7 1065 FBgn0034071 1286.916667 39.81333333 61.00666667 0.005439358 0.175820496 0.114741558 3 1 2 0.15 dme-miR-184-3p 6mer2-7 CCGTCC 2R 16082067 16082072 - 2R_16082067_16082072_- 0.642035919 0.933427697 0.787731808 0.206045118 Dg FBtr0306238|FBtr0087256|FBtr0087258|FBtr0087257 16081174|16081665|16081665|16081665 16083271|16083271|16083271|16083271 2R - 16081986 16082137 3'utr Dg FlyBase G23940.1 ATGTAGCTGCTAGTTGGGCAGTACTTACTACACTACTACCTACTACTATCTACTACCTAATCCAACCGTCCCTTATCCCTGAATCGAACTAACATGTAGTGAGTAAAGCATTGATTTTATATGAACTTATAGTGGAAGTCCAGAGCCTAAGT 29 16082064 0.983456213 14 25 198 0.848484848 1.146128036 0.060606061 0.137931034 0.242424242 29 4 1 28 2R:16081986-16082137 6 Dg FBtr0087258|FBtr0087257|FBtr0306238|FBtr0087256 16081665|16081665|16081174|16081665 16083271|16083271|16083271|16083271 CCGTCC 6mer2-7 dme-miR-184-3p 2R - 16082015 16082089 3'utr Dg FlyBase G18122.1 TCTACTACCTAATCCAACCGTCCCTTATCCCTGAATCGAACTAACATGTAGTGAGTAAAGCATTGATTTTATATG 12 16082064 0.84238356 7 11 77 1 1.204119983 0.125 0.25 0.4375 12 0 0 16 2R:16082015-16082089 6 12 1066 FBgn0034072 2596.65 61.60333333 94.99 0.004621339 0.194794654 0.126329087 -8 -8 -8 0.15 dme-miR-980-3p 8mer-A1 GGCAGCTA 2R 16082658 16082665 - 2R_16082658_16082665_- 0.668610621 0.668287001 0.668448811 0.00022882 Dg FBtr0306238|FBtr0087256|FBtr0087258|FBtr0087257 16081174|16081665|16081665|16081665 16083271|16083271|16083271|16083271 2R - 16082618 16082676 3'utr Dg FlyBase G23943.1 CCACGTCCCTGGGCAGCTATTAGACTTTCAGCTTGATTTGCTCAAGCTGAATTGCTTGC 31 16082657 0.841091109 6 29 179 0.947368421 1.255272505 0.236842105 0.193548387 0.342105263 31 1 1 36 2R:16082618-16082676 8 Dg FBtr0087258|FBtr0087257|FBtr0306238|FBtr0087256 16081665|16081665|16081174|16081665 16083271|16083271|16083271|16083271 GGCAGCTA 8mer-A1 dme-miR-980-3p 2R - 16082619 16082676 3'utr Dg FlyBase G18123.1 CCACGTCCCTGGGCAGCTATTAGACTTTCAGCTTGATTTGCTCAAGCTGAATTGCTTG 28 16082657 0.739482349 6 26 155 0.944444444 1.531478917 0.027777778 0.285714286 0.444444444 28 2 0 34 2R:16082619-16082676 8 25.5 1067 FBgn0034072 2596.65 61.60333333 94.99 0.009820345 0.41393864 0.26844931 -8 -8 -8 0.15 dme-miR-999-3p 6mer3-8 AGTTAA 2R 16082709 16082714 - 2R_16082709_16082714_- 0.999593016 0.995439944 0.99751648 0.002936685 Dg FBtr0306238|FBtr0087256|FBtr0087258|FBtr0087257 16081174|16081665|16081665|16081665 16083271|16083271|16083271|16083271 2R - 16082692 16082726 3'utr Dg FlyBase G23944.1 GTACTAAAATTAAGTTAAACGCGAGAAAGAAGGCA 9 16082712 0.931765806 3 7 27 0.888888889 0.903089987 0.111111111 0 0 9 1 0 8 2R:16082692-16082726 6 Dg FBtr0087258|FBtr0087257|FBtr0306238|FBtr0087256 16081665|16081665|16081174|16081665 16083271|16083271|16083271|16083271 AGTTAA 6mer3-8 dme-miR-999-3p 2R - 16082693 16082724 3'utr Dg FlyBase G18124.1 ACTAAAATTAAGTTAAACGCGAGAAAGAAGGC 5 16082711 0.961968141 2 3 14 0.857142857 0.77815125 0.285714286 0.4 0.571428571 5 1 0 6 2R:16082693-16082724 6 6.5 1068 FBgn0034072 2596.65 61.60333333 94.99 0.002503225 0.105513771 0.068428256 -2 -3 -2.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2R 16106360 16106365 + 2R_16106360_16106365_+ 0.998006641 0.999818575 0.998912608 0.001281277 Rho1 FBtr0087214|FBtr0087216|FBtr0087211|FBtr0087212|FBtr0087213|FBtr0087217 16106050|16106050|16106050|16106050|16106050|16106050 16106489|16107229|16106489|16107229|16107229|16107229 2R + 16106238 16106377 3'utr Rho1 FlyBase G16277.1 AACAAACATGAGCAGAAAACAGAGAGCTTGAGCTAGAAGATCAGCGGAGGAGGGATGCAGCGAGATATAAGGGAAGGCAGCACCAAGTAGAATGTCAAATGCGGATTTGATTTTATATACAGTCTAGTGTAGTTATAAAC 33 16106343 0.960980034 16 32 156 0.975609756 1.602059991 0.341463415 0.151515152 0.317073171 33 1 0 40 2R:16106238-16106377 6 Rho1 FBtr0087211|FBtr0087212|FBtr0087213|FBtr0087217|FBtr0087214|FBtr0087216 16106050|16106050|16106050|16106050|16106050|16106050 16106489|16107229|16107229|16107229|16106489|16107229 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 16106312 16106380 3'utr Rho1 FlyBase G12354.1 AGGCAGCACCAAGTAGAATGTCAAATGCGGATTTGATTTTATATACAGTCTAGTGTAGTTATAAACCGA 9 16106338 0.979705776 6 9 67 1 1.041392685 0 0.222222222 0.363636364 9 0 0 11 2R:16106312-16106380 6 4.5 1069 FBgn0014020 13816.13667 1325.1 2048.813333 0.000325706 0.00339597 0.002196393 17 22 19.5 0.15 dme-miR-980-5p 7mer-m1 AAAAACT 2R 16106418 16106424 + 2R_16106418_16106424_+ 0.76558658 0.765566951 0.765576766 1.39E-05 Rho1 FBtr0087214|FBtr0087216|FBtr0087211|FBtr0087212|FBtr0087213|FBtr0087217 16106050|16106050|16106050|16106050|16106050|16106050 16106489|16107229|16106489|16107229|16107229|16107229 2R + 16106385 16106452 3'utr Rho1 FlyBase G16278.1 AACAACAGTAATAACTCTGGCATTATTATTTGTAAAAACTAGGGCAGAGCAGATCAATCAGTCAGCCA 11 16106402 0.979376616 9 11 71 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 2R:16106385-16106452 7 Rho1 FBtr0087211|FBtr0087212|FBtr0087213|FBtr0087217|FBtr0087214|FBtr0087216 16106050|16106050|16106050|16106050|16106050|16106050 16106489|16107229|16107229|16107229|16106489|16107229 AAAAACT 7mer-m1 dme-miR-980-5p 2R + 16106386 16106438 3'utr Rho1 FlyBase G12355.1 ACAACAGTAATAACTCTGGCATTATTATTTGTAAAAACTAGGGCAGAGCAGAT 6 16106403 0.967776752 4 5 32 1 1 0 0.5 0.7 6 0 0 10 2R:16106386-16106438 7 3.5 1070 FBgn0014020 13816.13667 1325.1 2048.813333 0.000253327 0.00264131 0.001708306 16 15 15.5 0.15 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 16106575 16106580 + 2R_16106575_16106580_+ 0.998280358 0.999989105 0.999134732 0.001208233 Rho1 FBtr0087216|FBtr0087212|FBtr0087213|FBtr0087217 16106050|16106050|16106050|16106050 16107229|16107229|16107229|16107229 2R + 16106556 16106623 3'utr Rho1 FlyBase G16280.1 GTTGTCAAGTGTAGAGTCGGCTGTGGCTGGACGAGATTGTGTCGTATGCGAGGGTGAGTGAGTCAGGT 12 16106572 0.982148918 6 9 66 0.769230769 0.698970004 0.692307692 0.083333333 0.153846154 12 2 1 10 2R:16106556-16106623 6 Rho1 FBtr0087212|FBtr0087213|FBtr0087217|FBtr0087216 16106050|16106050|16106050|16106050 16107229|16107229|16107229|16107229 GCTGTG 6mer2-7 dme-miR-1008-3p 2R + 16106531 16106592 3'utr Rho1 FlyBase G12357.1 TGTATGTTATTATTTCGTTAACTGTGTTGTCAAGTGTAGAGTCGGCTGTGGCTGGACGAGAT 6 16106565 0.970215811 3 6 46 1 1.113943352 0.615384615 0.5 0.769230769 6 0 0 13 2R:16106531-16106592 6 6.5 1071 FBgn0014020 13816.13667 1325.1 2048.813333 0.000470464 0.00490529 0.003172568 3 10 6.5 0.15 dme-miR-2a-2-5p 7mer-A1 GATGAGA 2R 16106703 16106709 + 2R_16106703_16106709_+ 0.78291182 0.782911824 0.782911822 0 Rho1 FBtr0087216|FBtr0087212|FBtr0087213|FBtr0087217 16106050|16106050|16106050|16106050 16107229|16107229|16107229|16107229 2R + 16106650 16106732 3'utr Rho1 FlyBase G16281.1 GGAAACGGAATCGGATGTTGGATCCCGGGGTCCAAGGAGGTCGTAGGCGTCAAGATGAGAGTTATGTTCCCATTAAATCTATC 12 16106705 0.983969879 8 11 79 0.923076923 0.77815125 0.153846154 0.083333333 0.153846154 12 0 1 12 2R:16106650-16106732 7 Rho1 FBtr0087212|FBtr0087213|FBtr0087217|FBtr0087216 16106050|16106050|16106050|16106050 16107229|16107229|16107229|16107229 GATGAGA 7mer-A1 dme-miR-2a-2-5p 2R + 16106668 16106758 3'utr Rho1 FlyBase G12358.1 TGGATCCCGGGGTCCAAGGAGGTCGTAGGCGTCAAGATGAGAGTTATGTTCCCATTAAATCTATCAAATACAGAGAGACCAGGCCGCCAAT 12 16106714 0.975307998 5 10 72 1 1.255272505 0.111111111 0.416666667 0.611111111 12 0 0 18 2R:16106668-16106758 7 7.5 1072 FBgn0014020 13816.13667 1325.1 2048.813333 0.000542844 0.00565995 0.003660656 -2 -11 -6.5 0.15 dme-bantam-3p 6mer3-8 TGATCT 2R 16107213 16107218 + 2R_16107213_16107218_+ 0.999950297 0.999997309 0.999973803 3.32E-05 Rho1 FBtr0087216|FBtr0087212|FBtr0087213|FBtr0087217 16106050|16106050|16106050|16106050 16107229|16107229|16107229|16107229 2R + 16107117 16107231 3'utr Rho1 FlyBase G16285.1 ACCGTCAATCGTGTAATTCTCACACAGAAGTTGAAAAACTCGAAGATGCATCAGATACAACCAAACTATATTATACTTATGAATAAACAGTACATTTGATCTACTCTTGGTTTAA 32 16107212 0.984671253 13 31 248 0.975609756 1.602059991 0.219512195 0.28125 0.43902439 32 1 0 40 2R:16107117-16107231 6 Rho1 FBtr0087212|FBtr0087213|FBtr0087217|FBtr0087216 16106050|16106050|16106050|16106050 16107229|16107229|16107229|16107229 TGATCT 6mer3-8 dme-bantam-3p 2R + 16107179 16107225 3'utr Rho1 FlyBase G12360.1 AAACTATATTATACTTATGAATAAACAGTACATTTGATCTACTCTTG 12 16107212 0.98813775 6 10 93 0.8 1.079181246 0.066666667 0.25 0.4 12 3 0 12 2R:16107179-16107225 6 15 1073 FBgn0014020 13816.13667 1325.1 2048.813333 0.001085687 0.0113199 0.007321311 1 1 1 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 2R 16107996 16108002 - 2R_16107996_16108002_- 0.607603803 0.602345334 0.604974568 0.003718321 Ric FBtr0300576|FBtr0087254 16107675|16107438 16108756|16108756 2R - 16107979 16108038 3'utr Ric FlyBase G23957.2 AAGCCCAAATTGATAATTTAAGTCCACGACAGCCGATGCATTTGTTGTTTAAGTTTGAGA 36 16107998 0.840768139 6 35 227 0.957446809 1.653212514 0.085106383 0.222222222 0.404255319 36 2 0 45 2R:16107979-16108038 7 Ric FBtr0300576|FBtr0087254 16107675|16107438 16108756|16108756 TGCATTT 7mer-m8 dme-miR-277-3p 2R - 16107982 16108019 3'utr Ric FlyBase G18134.1 AAGTCCACGACAGCCGATGCATTTGTTGTTTAAGTTTG 31 16107998 0.664441808 5 31 157 1 1.716003344 0.057692308 0.483870968 0.692307692 31 0 0 52 2R:16107982-16108019 7 31.5 1074 FBgn0265605 681.3433333 39.13333333 60.19 0.046232198 0.804940375 0.523342748 -4 -4 -4 0.15 dme-miR-278-3p 7mer-A1 CCACCGA 2R 16136242 16136248 + 2R_16136242_16136248_+ 0.638746806 0.574260977 0.606503892 0.045598346 spin FBtr0089589 16136204 16138238 2R + 16136217 16136254 3'utr spin FlyBase G16292.1 AAGAACCCCAGCGACTCTGGACTGACCACCGAGCTGCG 12 16136234 0.903867761 3 11 34 0.916666667 1.041392685 0.5 0 0 12 1 0 11 2R:16136217-16136254 7 spin FBtr0089589 16136204 16138238 CCACCGA 7mer-A1 dme-miR-278-3p 2R + 16136208 16136259 3'utr spin FlyBase G12364.1 CACCTGCACAAGAACCCCAGCGACTCTGGACTGACCACCGAGCTGCGAAGCA 13 16136234 0.874094546 4 13 33 1 1.204119983 0.625 0.230769231 0.375 13 0 0 16 2R:16136208-16136259 7 11.5 1075 FBgn0086676 4918.906667 189.3433333 292.6266667 0.002337918 0.060736229 0.039299221 8 8 8 0.15 dme-miR-277-3p 7mer-A1 GCATTTA 2R 16141707 16141713 + 2R_16141707_16141713_+ 0.823230421 0.823299709 0.823265065 4.90E-05 Got1 FBtr0087231|FBtr0087232 16141592|16141592 16141928|16141928 2R + 16141672 16141794 3'utr Got1 FlyBase G16301.2 ATCCCAAAGCTGGATCACAGATGTCTGCACCATTGGCATTTAAATCAAACCAACAACAATTGCAATTACTAAACGTTTATACGCGGCTTTTAGATGGATATACACATATTATACACCGGAAAC 69 16141705 0.980309831 15 66 466 0.975 1.892094603 0.0875 0.130434783 0.25 69 2 0 78 2R:16141672-16141794 7 Got1 FBtr0087231|FBtr0087232 16141592|16141592 16141928|16141928 GCATTTA 7mer-A1 dme-miR-277-3p 2R + 16141678 16141768 3'utr Got1 FlyBase G12377.1 AAGCTGGATCACAGATGTCTGCACCATTGGCATTTAAATCAAACCAACAACAATTGCAATTACTAAACGTTTATACGCGGCTTTTAGATGG 29 16141705 0.918595857 8 29 185 1 1.672097858 0.063829787 0.413793103 0.638297872 29 0 0 47 2R:16141678-16141768 7 27 1076 FBgn0001124 622.6666667 44.53666667 67.53 0.043361884 0.606242048 0.399822301 2 2 2 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT 2R 16145990 16145996 - 2R_16145990_16145996_- 0.658803275 0.658775473 0.658789374 1.97E-05 Ext2 FBtr0100513 16145902 16146381 2R - 16145970 16146010 3'utr Ext2 FlyBase G23963.1 TAGGTCGTAATATTGGCAGCTTTTATCTAGACTTTATTTTG 118 16145997 0.783795038 12 103 1142 0.892307692 1.023065304 0.192307692 0.093220339 0.176923077 118 4 10 116 2R:16145970-16146010 7 Ext2 FBtr0100513 16145902 16146381 GGCAGCT 7mer-m8 dme-miR-980-3p 2R - 16145911 16146010 3'utr Ext2 FlyBase G18137.1 TAGGTCGTAATATTGGCAGCTTTTATCTAGACTTTATTTTGATTTTAAATCAATAATTTAAAAAACTGAAACTGGCCTGTAAATAAGAATTAAAATAATC 112 16145998 0.989554471 18 99 985 0.883040936 1.224734438 0.105263158 0.375 0.590643275 112 12 8 151 2R:16145911-16146010 7 98.5 1077 FBgn0029175 123.3333333 5.64 8.726666667 0.798648649 17.46453901 11.28724217 1 2 1.5 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 2R 16146150 16146155 - 2R_16146150_16146155_- 0.895877095 0.985150863 0.940513979 0.063126109 Ext2 FBtr0100513 16145902 16146381 2R - 16146096 16146161 3'utr Ext2 FlyBase G23965.1 ATTCTTTTGACTTCTCATTGGTACTCAAAAATCCAATTATTCCGTTTGGATTCTCACGTATTTGTC 25 16146144 0.985861528 8 24 215 0.964285714 1.431363764 0.142857143 0.12 0.214285714 25 1 0 27 2R:16146096-16146161 6 Ext2 FBtr0100513 16145902 16146381 TTGACT 6mer3-8 dme-miR-1012-3p 2R - 16146128 16146177 3'utr Ext2 FlyBase G18138.1 AGGCAGGTCCGGTTGTATTCTTTTGACTTCTCATTGGTACTCAAAAATCC 15 16146143 0.746474612 7 14 134 0.896551724 1.414973348 0.379310345 0.4 0.689655172 15 3 0 26 2R:16146128-16146177 6 18 1078 FBgn0029175 123.3333333 5.64 8.726666667 0.145945946 3.191489362 2.062643239 -11 -12 -11.5 0.15 dme-bantam-3p 6mer2-7 GATCTC 2R 16146227 16146232 - 2R_16146227_16146232_- 0.999999882 0.999999993 0.999999938 7.07E-08 Ext2 FBtr0100513 16145902 16146381 2R - 16146202 16146247 3'utr Ext2 FlyBase G23966.1 AGGCCAACTTATCTGGATCTCGCTTAGAAAATCAATTTCGTCATTG 22 16146235 0.631600099 8 20 139 0.925925926 0.920818754 0.111111111 0.227272727 0.37037037 22 0 2 25 2R:16146202-16146247 6 Ext2 FBtr0100513 16145902 16146381 GATCTC 6mer2-7 dme-bantam-3p 2R - 16146203 16146290 3'utr Ext2 FlyBase G18139.1 AATGTTCGTTTATATCATAGCAATACCTTCTTAACGGATAAAGAGGCCAACTTATCTGGATCTCGCTTAGAAAATCAATTTCGTCATT 11 16146224 0.987250248 6 10 82 0.95 1.278753601 0.05 0.636363636 0.8 11 1 0 19 2R:16146203-16146290 6 12 1079 FBgn0029175 123.3333333 5.64 8.726666667 0.097297297 2.127659574 1.375095493 3 -8 -2.5 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 2R 16146326 16146333 - 2R_16146326_16146333_- 0.643085161 0.642375901 0.642730531 0.000501551 Ext2 FBtr0100513 16145902 16146381 2R - 16146321 16146357 3'utr Ext2 FlyBase G23967.1 TTCCAGAGGAACCTATGCAGATATACCAAAGACTTCT 29 16146334 0.903560685 3 28 134 0.971428571 1.531478917 0.228571429 0.206896552 0.342857143 29 1 0 34 2R:16146321-16146357 8 Ext2 FBtr0100513 16145902 16146381 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 16146321 16146402 stop_codon Ext2 FlyBase G18140.1 AATGATATTGGTAGCTTATAAGGGTCCTTAGCTTTGAGGCCAACATTCCAGAGGAACCTATGCAGATATACCAAAGACTTCT 21 16146334 0.900705693 4 20 109 0.972222222 1.243038049 0.166666667 0.476190476 0.694444444 21 0 1 35 2R:16146321-16146402 8 21.5 1080 FBgn0029175 123.3333333 5.64 8.726666667 0.174324324 3.812056738 2.463712758 1 1 1 0.15 dme-miR-988-3p 6mer2-7 CAAGGG 2R 16183693 16183698 + 2R_16183693_16183698_+ 0.999999813 0.999999853 0.999999833 7.07E-08 Lis-1 FBtr0087240|FBtr0087241|FBtr0304747|FBtr0087236 16183675|16183675|16183675|16183675 16185103|16185103|16183991|16185103 2R + 16183680 16183733 3'utr Lis-1 FlyBase G16359.1 AAGGAAGAATCGGCAAGGGTTCTGCTTACTTCTCAATTTAAACATAAATAAAGC 26 16183706 0.627784791 6 24 215 0.970588235 1.51851394 0.029411765 0.269230769 0.441176471 26 1 0 33 2R:16183680-16183733 6 Lis-1 FBtr0087236|FBtr0304747|FBtr0087241|FBtr0087240 16183675|16183675|16183675|16183675 16185103|16183991|16185103|16185103 CAAGGG 6mer2-7 dme-miR-988-3p 2R + 16183668 16183720 stop_codon Lis-1 FlyBase G12426.1 TGTCGTTAAATTAAGGAAGAATCGGCAAGGGTTCTGCTTACTTCTCAATTTAA 22 16183706 0.785535448 8 19 168 0.84 0.84509804 0.12 0.136363636 0.24 22 2 2 21 2R:16183668-16183720 6 20.5 1081 FBgn0015754 1628.096667 94.36 143.8866667 0.01259139 0.217253073 0.142473243 -13 -13 -13 0.15 dme-miR-999-3p 6mer3-8 AGTTAA 2R 16183988 16183993 + 2R_16183988_16183993_+ 0.999998506 0.999998511 0.999998509 0 Lis-1 FBtr0087240|FBtr0087241|FBtr0087236 16183675|16183675|16183675 16185103|16185103|16185103 2R + 16183975 16184012 3'utr Lis-1 FlyBase G16361.1 GATTATCGTTTAAAGTTAATGCCGCCCTCCTTTATAAA 5 16183993 0.717100882 3 5 43 1 0.903089987 0 0.4 0.625 5 0 0 8 2R:16183975-16184012 6 Lis-1 FBtr0087236|FBtr0087241|FBtr0087240 16183675|16183675|16183675 16185103|16185103|16185103 AGTTAA 6mer3-8 dme-miR-999-3p 2R + 16183975 16184008 3'utr Lis-1 FlyBase G12428.1 GATTATCGTTTAAAGTTAATGCCGCCCTCCTTTA 5 16183993 0.73429486 3 5 34 1 0.954242509 0 0.6 0.777777778 5 0 0 9 2R:16183975-16184008 6 5 1082 FBgn0015754 1628.096667 94.36 143.8866667 0.003071071 0.052988554 0.034749571 -5 -5 -5 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 16184444 16184450 + 2R_16184444_16184450_+ 0.661599064 0.661614206 0.661606635 1.07E-05 Lis-1 FBtr0087240|FBtr0087241|FBtr0087236 16183675|16183675|16183675 16185103|16185103|16185103 2R + 16184394 16184476 3'utr Lis-1 FlyBase G16363.1 GATAACAGTTTGCTTCTTTTAACCATATTCACTTTACACAATTCCTGTTTTGTGTTCTTTTTCGCGAAAGGATCTTCAACAAA 47 16184443 0.994858123 9 45 627 0.981818182 1.73239376 0.036363636 0.170212766 0.290909091 47 1 0 54 2R:16184394-16184476 7 Lis-1 FBtr0087236|FBtr0087241|FBtr0087240 16183675|16183675|16183675 16185103|16185103|16185103 TGTGTTC 7mer-m8 dme-miR-317-3p 2R + 16184409 16184460 3'utr Lis-1 FlyBase G12430.1 CTTTTAACCATATTCACTTTACACAATTCCTGTTTTGTGTTCTTTTTCGCGA 27 16184443 0.99430167 6 27 354 1 1.531478917 0.029411765 0.222222222 0.382352941 27 0 0 34 2R:16184409-16184460 7 34.5 1083 FBgn0015754 1628.096667 94.36 143.8866667 0.021190388 0.365621026 0.239772043 1 1 1 0.15 dme-miR-33-5p 7mer-m8 CAATGCA 2R 16184972 16184978 + 2R_16184972_16184978_+ 0.673961453 0.615402276 0.644681865 0.041407607 Lis-1 FBtr0087240|FBtr0087241|FBtr0087236 16183675|16183675|16183675 16185103|16185103|16185103 2R + 16184938 16184991 3'utr Lis-1 FlyBase G16366.1 AAAAAACAAAATGCGCACTAAAGCCACGACAACTCAATGCATAATTCGCAAAAC 10 16184971 0.918386417 4 10 33 1 1.041392685 0.272727273 0.1 0.181818182 10 0 0 11 2R:16184938-16184991 7 Lis-1 FBtr0087236|FBtr0087241|FBtr0087240 16183675|16183675|16183675 16185103|16185103|16185103 CAATGCA 7mer-m8 dme-miR-33-5p 2R + 16184956 16184985 3'utr Lis-1 FlyBase G12433.1 TAAAGCCACGACAACTCAATGCATAATTCG 5 16184979 0.944892381 4 4 18 0.857142857 0.77815125 0.428571429 0.4 0.571428571 5 1 0 6 2R:16184956-16184985 7 7 1084 FBgn0015754 1628.096667 94.36 143.8866667 0.004299499 0.074183976 0.0486494 1 -7 -3 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT 2R 16194249 16194255 - 2R_16194249_16194255_- 0.658941893 0.658930347 0.65893612 8.20E-06 calypso FBtr0087245|FBtr0087246 16194060|16194060 16194434|16194434 2R - 16194231 16194291 3'utr calypso FlyBase G23979.1 ACTCAAATGCGGTTCTTTTAAATACGAAATCAACTTGGCAGCTTCATTTTTATTTGATCGC 175 16194257 0.832030415 6 172 1135 0.985148515 1.696793085 0.475247525 0.131428571 0.247524752 175 0 3 199 2R:16194231-16194291 7 calypso FBtr0087246|FBtr0087245 16194060|16194060 16194434|16194434 GGCAGCT 7mer-m8 dme-miR-980-3p 2R - 16194231 16194268 3'utr calypso FlyBase G18147.1 ACGAAATCAACTTGGCAGCTTCATTTTTATTTGATCGC 147 16194257 0.838331054 4 146 982 0.990990991 2.342422681 0.436936937 0.367346939 0.581081081 147 2 0 220 2R:16194231-16194268 7 159.5 1085 FBgn0262166 217.8466667 12.40333333 18.96 0.732166356 12.85944639 8.412447257 2 2 2 0.15 dme-miR-8-3p 7mer-m8 CAGTATT 2R 16194362 16194368 - 2R_16194362_16194368_- 0.661525439 0.661050658 0.661288048 0.000335664 calypso FBtr0087245|FBtr0087246 16194060|16194060 16194434|16194434 2R - 16194315 16194391 3'utr calypso FlyBase G23980.1 TGCATTTTTAAGACCATTCATTCCAGTATTGTTTTTCTACAATTTCCCCACCAAGAAGCACCATTAACCCATAAGAT 28 16194371 0.989152823 6 28 266 1 1.477121255 0.1 0.071428571 0.133333333 28 0 0 30 2R:16194315-16194391 7 calypso FBtr0087246|FBtr0087245 16194060|16194060 16194434|16194434 CAGTATT 7mer-m8 dme-miR-8-3p 2R - 16194335 16194392 3'utr calypso FlyBase G18148.1 TTGCATTTTTAAGACCATTCATTCCAGTATTGTTTTTCTACAATTTCCCCACCAAGAA 8 16194371 0.991667507 3 8 87 1 1.146128036 0.142857143 0.375 0.642857143 8 0 0 14 2R:16194335-16194392 7 15 1086 FBgn0262166 217.8466667 12.40333333 18.96 0.06885577 1.209352325 0.791139241 3 3 3 0.15 dme-miR-980-5p 7mer-m1 AAAAACT 2R 16198018 16198024 + 2R_16198018_16198024_+ 0.619472887 0.703764411 0.661618649 0.059603091 CG42837 FBtr0303860 16197515 16199378 2R + 16197968 16198069 3'utr CG42837 FlyBase G16397.1 CGCAGTCCAGCGATGTGTTCACCAACCTCGCTCTAGAGGATTGGCTGTACAAAAACTTTGATTTCAGCCGCCACCATGTGCTGCTGCTGTGGGCCAACGACC 27 16198009 0.974301643 9 27 160 1 1.51851394 0.060606061 0.148148148 0.303030303 27 0 0 33 2R:16197968-16198069 7 CG42837 FBtr0303860 16197515 16199378 AAAAACT 7mer-m1 dme-miR-980-5p 2R + 16197939 16198052 3'utr CG42837 FlyBase G12451.1 TTCGGAGATCAAGAAGTCCGTGTTCATCTCGCAGTCCAGCGATGTGTTCACCAACCTCGCTCTAGAGGATTGGCTGTACAAAAACTTTGATTTCAGCCGCCACCATGTGCTGCT 14 16198025 0.980568834 7 13 90 0.888888889 0.77815125 0.222222222 0.571428571 0.777777778 14 0 3 24 2R:16197939-16198052 7 16 1087 FBgn0262026 104.31 5.966666667 9.106666667 0.153388937 2.681564246 1.756954612 9 -7 1 0.15 dme-bantam-3p 6mer3-8 TGATCT 2R 16198185 16198190 + 2R_16198185_16198190_+ 0.966738754 0.997915247 0.982327001 0.022045044 CG42837 FBtr0303860 16197515 16199378 2R + 16198164 16198208 3'utr CG42837 FlyBase G16398.1 TGGCGGTGGAGCGGTGTACCATGATCTTGGGAACCTCAACTGCAC 12 16198185 0.840591683 3 11 65 0.857142857 1.079181246 0.214285714 0.166666667 0.285714286 12 2 0 12 2R:16198164-16198208 6 CG42837 FBtr0303860 16197515 16199378 TGATCT 6mer3-8 dme-bantam-3p 2R + 16198161 16198195 3'utr CG42837 FlyBase G12452.1 TAGTGGCGGTGGAGCGGTGTACCATGATCTTGGGA 8 16198185 0.742623543 4 8 49 1 1.204119983 0.3125 0.5 0.75 8 0 0 16 2R:16198161-16198195 6 8.5 1088 FBgn0262026 104.31 5.966666667 9.106666667 0.081487873 1.424581006 0.933382138 0 0 0 0.15 dme-miR-965-3p 7mer-m8 TACGCTT 2R 16198724 16198730 + 2R_16198724_16198730_+ 0.611598941 0.618767226 0.615183083 0.005068754 CG42837 FBtr0303860 16197515 16199378 2R + 16198698 16198742 3'utr CG42837 FlyBase G16399.1 TACGAGTATTTGAGAACGGCTGCAACTACGCTTGAAGACGGCGGC 6 16198724 0.902221087 2 6 19 1 0.954242509 0.222222222 0.5 0.666666667 6 0 0 9 2R:16198698-16198742 7 CG42837 FBtr0303860 16197515 16199378 TACGCTT 7mer-m8 dme-miR-965-3p 2R + 16198709 16198746 3'utr CG42837 FlyBase G12454.1 GAGAACGGCTGCAACTACGCTTGAAGACGGCGGCAGCA 5 16198724 0.89781642 2 5 15 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 2R:16198709-16198746 7 4.5 1089 FBgn0262026 104.31 5.966666667 9.106666667 0.043140638 0.754189944 0.494143485 0 0 0 0.15 dme-miR-277-3p 6mer3-8 TGCATT 2R 16199351 16199356 + 2R_16199351_16199356_+ 0.999999351 0.999999903 0.999999627 3.54E-07 CG42837 FBtr0303860 16197515 16199378 2R + 16199318 16199372 3'utr CG42837 FlyBase G16402.1 TTACTTTTGTTACCACGTTTTATATAAAAGAACTGCATTAAATGTTTAAACATTG 22 16199341 0.983602483 6 21 168 0.956521739 1.342422681 0.086956522 0.045454545 0.086956522 22 1 0 22 2R:16199318-16199372 6 CG42837 FBtr0303860 16197515 16199378 TGCATT 6mer3-8 dme-miR-277-3p 2R + 16199333 16199370 3'utr CG42837 FlyBase G12456.1 CGTTTTATATAAAAGAACTGCATTAAATGTTTAAACAT 19 16199341 0.673189151 8 18 137 0.962962963 1.113943352 0 0.315789474 0.518518519 19 0 1 26 2R:16199333-16199370 6 20.5 1090 FBgn0262026 104.31 5.966666667 9.106666667 0.196529575 3.43575419 2.251098097 10 10 10 0.15 dme-miR-2a-2-5p 7mer-A1 GATGAGA 2R 16267155 16267161 - 2R_16267155_16267161_- 0.53927547 0.78260797 0.66094172 0.172062061 Khc FBtr0087184 16266958 16267263 2R - 16267113 16267265 stop_codon Khc FlyBase G24030.1 AGATCCAATCACCACCTGTCGCCGCCCAGTTCAGCTCCGCTTTAAACTAAACTAAATGGATTACGTTATACATACTTAACATAACTGATAATTGCCTTCGCTTAGATGAGATGTGTCGCGATCATGTGCAGCGCTTTAAATATACATACATAT 38 16267171 0.83742286 18 37 278 0.978723404 1.662757832 0.14893617 0.236842105 0.382978723 38 1 0 46 2R:16267113-16267265 7 Khc FBtr0087184 16266958 16267263 GATGAGA 7mer-A1 dme-miR-2a-2-5p 2R - 16267121 16267265 stop_codon Khc FlyBase G18192.1 AGATCCAATCACCACCTGTCGCCGCCCAGTTCAGCTCCGCTTTAAACTAAACTAAATGGATTACGTTATACATACTTAACATAACTGATAATTGCCTTCGCTTAGATGAGATGTGTCGCGATCATGTGCAGCGCTTTAAATATAC 30 16267170 0.980552155 14 27 193 0.93877551 1.662757832 0.102040816 0.517241379 0.714285714 29 3 0 46 2R:16267121-16267265 7 8 1091 FBgn0001308 2547 83.14 127.7566667 0.00314095 0.096223238 0.062619041 10 9 9.5 0.15 dme-miR-184-5p 6mer2-7 GATAAG 2R 16321091 16321096 - 2R_16321091_16321096_- 0.673924219 0.649600364 0.661762292 0.017199524 CG30096 FBtr0289994 16320813 16321126 2R - 16321043 16321120 3'utr CG30096 FlyBase G24055.1 TATGTATAAGTAAACTAAGCTGTAGATAAGTCTGAATATTATGAAAGTAAATGTTGTCTCTTGTATTTATTAAGTTAC 27 16321094 0.9867156 4 24 214 0.9 1.431363764 0.033333333 0.111111111 0.2 27 3 0 27 2R:16321043-16321120 6 CG30096 FBtr0289994 16320813 16321126 GATAAG 6mer2-7 dme-miR-184-5p 2R - 16321039 16321109 3'utr CG30096 FlyBase G18206.1 AAACTAAGCTGTAGATAAGTCTGAATATTATGAAAGTAAATGTTGTCTCTTGTATTTATTAAGTTACATTT 24 16321094 0.985629013 2 21 187 0.875 1.447158031 0.0625 0.333333333 0.5 24 4 0 28 2R:16321039-16321109 6 21.5 1092 FBgn0050096 38.66666667 4.263333333 6.543333333 0.556034483 5.043002346 3.285787061 -2 -2 -2 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 16532600 16532607 + 2R_16532600_16532607_+ 0.402118915 0.599140228 0.500629572 0.139315097 Sema-2a FBtr0087089|FBtr0345339|FBtr0087090|FBtr0087088 16532399|16532399|16532399|16532399 16533428|16533428|16533428|16533459 2R + 16532523 16532698 5'utr Sema-2a FlyBase G16473.1 ATAATCATTATTATCAGCGACATCATCATAGACATACTTTCTTCAGCAATGAACAGAAAACTCTTCCTAAAGGATTATGCATTTACCGAAGCATTTACAATGCATCCATTGACTTAGACTTAGACATTAGGGTATTATCGCATGACACAGCTCCTCCCATACGGTGCAATTCACCC 30 16532600 0.979991457 14 29 205 0.974358974 1.579783597 0.102564103 0.266666667 0.435897436 30 1 0 38 2R:16532523-16532698 8 Sema-2a FBtr0087088|FBtr0087090|FBtr0345339|FBtr0087089 16532399|16532399|16532399|16532399 16533459|16533428|16533428|16533428 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 16532571 16532605 5'utr Sema-2a FlyBase G12514.1 ATGAACAGAAAACTCTTCCTAAAGGATTATGCATT 6 16532587 0.967523832 5 5 28 0.9 0.653212514 0.5 0.5 0.7 6 0 1 9 2R:16532571-16532605 6 5.5 1093 FBgn0011260 1008.703333 35.04333333 54.17 0.005452545 0.15694854 0.101532213 0 13 6.5 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 2R 16532631 16532636 + 2R_16532631_16532636_+ 0.988261886 0.996540842 0.992401364 0.005854066 Sema-2a FBtr0087089|FBtr0345339|FBtr0087090|FBtr0087088 16532399|16532399|16532399|16532399 16533428|16533428|16533428|16533459 2R + 16532523 16532698 5'utr Sema-2a FlyBase G16473.1 ATAATCATTATTATCAGCGACATCATCATAGACATACTTTCTTCAGCAATGAACAGAAAACTCTTCCTAAAGGATTATGCATTTACCGAAGCATTTACAATGCATCCATTGACTTAGACTTAGACATTAGGGTATTATCGCATGACACAGCTCCTCCCATACGGTGCAATTCACCC 30 16532632 0.979991457 14 29 205 0.974358974 1.579783597 0.102564103 0.266666667 0.435897436 30 1 0 38 2R:16532523-16532698 6 Sema-2a FBtr0087088|FBtr0087090|FBtr0345339|FBtr0087089 16532399|16532399|16532399|16532399 16533459|16533428|16533428|16533428 TTGACT 6mer3-8 dme-miR-1012-3p 2R + 16532621 16532679 5'utr Sema-2a FlyBase G12515.1 AATGCATCCATTGACTTAGACTTAGACATTAGGGTATTATCGCATGACACAGCTCCTCC 10 16532635 0.975327284 5 9 67 1 1.278753601 0.157894737 0.6 0.789473684 10 0 0 19 2R:16532621-16532679 6 9.5 1094 FBgn0011260 1008.703333 35.04333333 54.17 0.009418032 0.271092933 0.175373823 -1 -4 -2.5 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 16533360 16533367 + 2R_16533360_16533367_+ 0.496338299 0.496920002 0.49662915 0.000411324 Sema-2a FBtr0087089|FBtr0345339|FBtr0087090|FBtr0087088 16532399|16532399|16532399|16532399 16533428|16533428|16533428|16533459 2R + 16533334 16533379 5'utr Sema-2a FlyBase G16474.1 TGACTTGCACTCTCTTCACACTAAATGTACTTAAGGTAATTTGCAA 44 16533359 0.830129931 3 43 337 0.980392157 1.698970004 0.019607843 0.136363636 0.254901961 44 1 0 50 2R:16533334-16533379 8 Sema-2a FBtr0087088|FBtr0087090|FBtr0345339|FBtr0087089 16532399|16532399|16532399|16532399 16533459|16533428|16533428|16533428 GTACTTAA 8mer-A1 dme-miR-252-5p 2R + 16533329 16533428 5'utr Sema-2a FlyBase G12516.1 TTTAGTGACTTGCACTCTCTTCACACTAAATGTACTTAAGGTAATTTGCAAAAATCTTTAGTTCTTAAGCGTTTAGTTATAATAAAATGAGACAAAAACC 34 16533359 0.99907015 6 33 241 0.978723404 1.662757832 0 0.294117647 0.489361702 34 1 0 46 2R:16533329-16533428 8 34 1095 FBgn0011260 1008.703333 35.04333333 54.17 0.03370664 0.970227338 0.627653683 1 1 1 0.15 dme-miR-276a-3p 6mer2-7 GTTCCT 2R 16585157 16585162 + 2R_16585157_16585162_+ 0.999999345 0.999999986 0.999999665 4.95E-07 Cdk4 FBtr0340063|FBtr0345340|FBtr0087103|FBtr0087104|FBtr0087102 16585034|16585034|16585034|16585034|16585034 16585448|16585448|16585448|16585448|16585448 2R + 16584952 16585184 stop_codon Cdk4 FlyBase G16478.1 AAAATGCTTTCCTACGACCTCCACCTGCGACCATCCGCCTTGGCCTGTTTGGAGCACGATTACTTTCAGCAGGAACCCCTATAGTCTCGATGCCCAGAAGGATAATGGATAATGGATTATGGATTATGGATTATGGATTATGGATGTGGAAGTGAAAGTGGCAGTGGACTGATCATTGCGGCCGCGCTTCGTTCTTGTTACCAATGTTCCTTTAAGTGTAGTGAAGCATTTTG 172 16585156 0.870702173 30 169 1631 0.984615385 1.806179974 0.517948718 0.11627907 0.220512821 172 1 2 192 2R:16584952-16585184 6 Cdk4 FBtr0087102|FBtr0340063|FBtr0345340|FBtr0087103|FBtr0087104 16585034|16585034|16585034|16585034|16585034 16585448|16585448|16585448|16585448|16585448 GTTCCT 6mer2-7 dme-miR-276a-3p 2R + 16585129 16585180 3'utr Cdk4 FlyBase G12519.2 GCGGCCGCGCTTCGTTCTTGTTACCAATGTTCCTTTAAGTGTAGTGAAGCAT 81 16585157 0.709733468 7 79 839 0.992 1.792391689 0.368 0.382716049 0.6 81 0 1 124 2R:16585129-16585180 6 107 1096 FBgn0016131 414.8133333 26.95666667 40.80666667 0.25794735 3.969333498 2.622120569 1 0 0.5 0.15 dme-miR-34-5p 6mer2-7 ACTGCC 2R 16585285 16585290 + 2R_16585285_16585290_+ 0.933897989 0.580832178 0.757365083 0.249655221 Cdk4 FBtr0340063|FBtr0345340|FBtr0087103|FBtr0087104|FBtr0087102 16585034|16585034|16585034|16585034|16585034 16585448|16585448|16585448|16585448|16585448 2R + 16585257 16585337 3'utr Cdk4 FlyBase G16479.1 TTGTAGTCGTAAGTTAAGTGTGAATACTACTGCCGATCAACTATCTGATGACCATTACATGTGAAACGATTCTCGAGGGCG 26 16585284 0.719682314 10 24 139 0.966666667 1.462397998 0.233333333 0.153846154 0.266666667 26 1 0 29 2R:16585257-16585337 6 Cdk4 FBtr0087102|FBtr0340063|FBtr0345340|FBtr0087103|FBtr0087104 16585034|16585034|16585034|16585034|16585034 16585448|16585448|16585448|16585448|16585448 ACTGCC 6mer2-7 dme-miR-34-5p 2R + 16585254 16585325 3'utr Cdk4 FlyBase G12520.1 TGTTTGTAGTCGTAAGTTAAGTGTGAATACTACTGCCGATCAACTATCTGATGACCATTACATGTGAAACGA 16 16585284 0.79437325 6 14 88 0.941176471 1.204119983 0.058823529 0.0625 0.117647059 16 1 0 16 2R:16585254-16585325 6 15 1097 FBgn0016131 414.8133333 26.95666667 40.80666667 0.036160843 0.556448621 0.367586996 1 1 1 0.15 dme-miR-14-3p 8mer-A1 AAGACTGA 2R 16791590 16791597 + 2R_16791590_16791597_+ 0.63325085 0.637201774 0.635226312 0.002793779 CG5522 FBtr0087030|FBtr0087029|FBtr0087031|FBtr0087028|FBtr0087026 16791350|16791350|16791350|16791350|16791350 16792472|16792472|16792472|16792472|16792472 2R + 16791477 16791638 3'utr CG5522 FlyBase G16511.1 ACATCGCTCACTCACTCCCTGAAACGAGGCAACCACAGAACATTCCCGCAACCACAACGAACGAACAAATTGCAGCTTGCATCAGATGAATCGATTTCAAAATGGTATTTCAAAAGACTGACACCGAATGAGAACACGAAGATATAGTAAAGGAGGAGCAGT 357 16791584 0.935187844 20 326 1563 0.920187793 1.639043558 0.241784038 0.145658263 0.284037559 357 26 8 392 2R:16791477-16791638 8 CG5522 FBtr0087026|FBtr0087031|FBtr0087028|FBtr0087030|FBtr0087029 16791350|16791350|16791350|16791350|16791350 16792472|16792472|16792472|16792472|16792472 AAGACTGA 8mer-A1 dme-miR-14-3p 2R + 16791435 16791628 3'utr CG5522 FlyBase G12555.2 CCTTGAAACGTGCACAGCCAAAAAAAAAAACACCCACCCACCACATCGCTCACTCACTCCCTGAAACGAGGCAACCACAGAACATTCCCGCAACCACAACGAACGAACAAATTGCAGCTTGCATCAGATGAATCGATTTCAAAATGGTATTTCAAAAGACTGACACCGAATGAGAACACGAAGATATAGTAAAG 275 16791584 0.964070358 18 243 1174 0.886419753 1.709996409 0.212345679 0.345454545 0.555555556 275 40 6 359 2R:16791435-16791628 8 184.5 1098 FBgn0034158 1968.163333 68.45666667 105.0966667 0.09374222 2.695135609 1.755526658 6 6 6 0.15 dme-miR-263a-5p 8mer-A1 GTGCCATA 2R 16792035 16792042 + 2R_16792035_16792042_+ 0.578496449 0.570444543 0.574470496 0.005693553 CG5522 FBtr0087030|FBtr0087029|FBtr0087031|FBtr0087028|FBtr0087026 16791350|16791350|16791350|16791350|16791350 16792472|16792472|16792472|16792472|16792472 2R + 16792015 16792057 3'utr CG5522 FlyBase G16513.1 AACTTAATTTTGCGCAGACTGTGCCATATTAGTTTATAAATTT 37 16792050 0.710439854 10 17 398 0.454545455 0.823908741 0 0.189189189 0.318181818 37 22 2 20 2R:16792015-16792057 8 CG5522 FBtr0087026|FBtr0087031|FBtr0087028|FBtr0087030|FBtr0087029 16791350|16791350|16791350|16791350|16791350 16792472|16792472|16792472|16792472|16792472 GTGCCATA 8mer-A1 dme-miR-263a-5p 2R + 16792020 16792092 3'utr CG5522 FlyBase G12557.1 AATTTTGCGCAGACTGTGCCATATTAGTTTATAAATTTATGTGTCTACACAAACACTGTTGGCCAGCAAACGA 22 16792047 0.992254127 11 14 194 0.653846154 0.753327667 0.038461538 0.136363636 0.269230769 22 7 2 17 2R:16792020-16792092 8 26.5 1099 FBgn0034158 1968.163333 68.45666667 105.0966667 0.01346433 0.387106199 0.252148815 -15 -12 -13.5 0.15 dme-miR-79-3p 6mer2-7 AGCTTT 2R 16792374 16792379 + 2R_16792374_16792379_+ 0.906250554 0.987296214 0.946773384 0.057307893 CG5522 FBtr0087030|FBtr0087029|FBtr0087031|FBtr0087028|FBtr0087026 16791350|16791350|16791350|16791350|16791350 16792472|16792472|16792472|16792472|16792472 2R + 16792328 16792450 3'utr CG5522 FlyBase G16516.1 GTTAGTGTTTCTTTTTTTCGGTTGAGAAATTGAATTGTAACACCTAAGCTTTGTCACACATACAGATTATCATTTGCAGTGTTTTACATTACATTTAAGAAAGAAATGCAACAAAAACAAAAT 42 16792372 0.985597933 17 42 346 1 1.72427587 0.20754717 0.19047619 0.358490566 42 0 0 53 2R:16792328-16792450 6 CG5522 FBtr0087026|FBtr0087031|FBtr0087028|FBtr0087030|FBtr0087029 16791350|16791350|16791350|16791350|16791350 16792472|16792472|16792472|16792472|16792472 AGCTTT 6mer2-7 dme-miR-79-3p 2R + 16792295 16792445 3'utr CG5522 FlyBase G12559.1 ATGCATGCGTAAATTATAGGAAACGAAAGTAATGTTAGTGTTTCTTTTTTTCGGTTGAGAAATTGAATTGTAACACCTAAGCTTTGTCACACATACAGATTATCATTTGCAGTGTTTTACATTACATTTAAGAAAGAAATGCAACAAAAAC 37 16792372 0.985890371 17 35 292 0.942307692 1.69019608 0.096153846 0.324324324 0.519230769 37 3 0 49 2R:16792295-16792445 6 19.5 1100 FBgn0034158 1968.163333 68.45666667 105.0966667 0.009907714 0.284851731 0.185543468 2 2 2 0.15 dme-miR-970-3p 6mer3-8 TCTTAT 2R 16860106 16860111 + 2R_16860106_16860111_+ 0.999999962 0.999999938 0.99999995 7.07E-08 Dek FBtr0100438|FBtr0100436|FBtr0100437|FBtr0332946 16859863|16859863|16859863|16859863 16860358|16860358|16860270|16861738 2R + 16860006 16860108 3'utr Dek FlyBase G16546.1 CCAAGTAGTTGTCTCCTATAAGTATATGATTTGTACTCCTATCCTAAAAGCTATCTGCAGTTCACCTTAATCCTAACGTCAGCGGCAGTCGACTATCCATTCT 26 16860084 0.789470712 15 24 173 0.945945946 1.243038049 0.189189189 0.230769231 0.459459459 26 1 1 35 2R:16860006-16860108 3 Dek FBtr0100437|FBtr0332946|FBtr0100438|FBtr0100436 16859863|16859863|16859863|16859863 16860270|16861738|16860358|16860358 TCTTAT 6mer3-8 dme-miR-970-3p 2R + 16859978 16860175 3'utr Dek FlyBase G12583.1 AGTTGGGCATGGTTCGCGAAATGTAACTCCAAGTAGTTGTCTCCTATAAGTATATGATTTGTACTCCTATCCTAAAAGCTATCTGCAGTTCACCTTAATCCTAACGTCAGCGGCAGTCGACTATCCATTCTTATATATATTCATCTGTATATATAACTTTTTATTTGTCCAACCGTGCGCACGCATGCACATCATTTT 31 16860103 0.978654424 22 29 243 0.9375 1.352182518 0.145833333 0.483870968 0.666666667 31 2 1 45 2R:16859978-16860175 6 3.5 1101 FBgn0026533 3518.623333 168.86 259.8033333 0.000994707 0.02072723 0.013471729 22 3 12.5 0.15 dme-miR-304-5p 7mer-m8 TGAGATT 2R 16952530 16952536 + 2R_16952530_16952536_+ 0.620203442 0.620203436 0.620203439 0 CG34191 FBtr0112384|FBtr0340071 16952500|16952500 16952581|16952581 2R + 16952513 16952570 3'utr CG34191 FlyBase G16563.1 CCATCTTATTTACCCTTTGAGATTTTCCCCCTTTTTGATGCTTATTAAATGTTAAACA 56 16952529 0.805840238 10 54 619 0.971830986 1.838849091 0 0.232142857 0.394366197 56 2 0 69 2R:16952513-16952570 7 CG34191 FBtr0340071|FBtr0112384 16952500|16952500 16952581|16952581 TGAGATT 7mer-m8 dme-miR-304-5p 2R + 16952511 16952567 3'utr CG34191 FlyBase G12597.1 TCCCATCTTATTTACCCTTTGAGATTTTCCCCCTTTTTGATGCTTATTAAATGTTAA 24 16952529 0.765002373 7 24 248 1 1.544068044 0.085714286 0.291666667 0.514285714 24 0 0 35 2R:16952511-16952567 7 28.5 1102 FBgn0085220 88.66666667 25.16333333 38.02 0.321428571 1.132600344 0.749605471 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 17008240 17008245 - 2R_17008240_17008245_- 0.998096643 0.997914191 0.998005417 0.000128976 Ehbp1 FBtr0114628|FBtr0114628|FBtr0114628|FBtr0340073|FBtr0340073|FBtr0340073|FBtr0114627|FBtr0114627|FBtr0114627|FBtr0087019|FBtr0087019|FBtr0087019 17007904|17007904|17007904|17007672|17007672|17007672|17007904|17007904|17007904|17007904|17007904|17007904 17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454 2R - 17008151 17008270 3'utr Ehbp1 FlyBase G24181.1 TGGTTATTAAAAAAAAAAAGGTATACTGTGAAACAAAACAAATTGCTTTTGTATTTAAGCAAAACAATTCAAGAAATAAGAACAAAACGTCCGTTAGTGAACTAAGTAAAAAGACAGGCA 413 17008247 0.787176222 15 393 1581 0.958515284 2.040404529 0.034934498 0.099273608 0.187772926 413 16 3 439 2R:17008151-17008270 6 Ehbp1 FBtr0087019|FBtr0087019|FBtr0087019|FBtr0114627|FBtr0114627|FBtr0114627|FBtr0340073|FBtr0340073|FBtr0340073|FBtr0114628|FBtr0114628|FBtr0114628 17007904|17007904|17007904|17007904|17007904|17007904|17007672|17007672|17007672|17007904|17007904|17007904 17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 17008207 17008284 3'utr Ehbp1 FlyBase G18305.1 TGGACCACTTGGTATGGTTATTAAAAAAAAAAAGGTATACTGTGAAACAAAACAAATTGCTTTTGTATTTAAGCAAAA 160 17008247 0.922222315 5 156 541 0.973568282 1.645422269 0 0.3125 0.515418502 160 2 4 221 2R:17008207-17008284 6 199 1103 FBgn0034180 1913.18 55.65333333 85.13666667 0.104015304 3.575706756 2.337418269 2 2 2 0.15 dme-miR-14-3p 6mer3-8 AAGACT 2R 17016467 17016472 - 2R_17016467_17016472_- 0.93277998 0.633562404 0.783171192 0.211578794 CG8963 FBtr0087017|FBtr0300573|FBtr0340126|FBtr0087016 17016224|17016344|17016344|17016344 17016965|17016965|17016965|17016965 2R - 17016436 17016487 3'utr CG8963 FlyBase G24204.1 ACGCAGCTGCACTCAAAGACTCGTACTCATATGCGCACCCACACACTTGCAT 24 17016464 0.958040527 5 21 103 0.892857143 1.096910013 0.214285714 0.125 0.25 24 2 1 25 2R:17016436-17016487 6 CG8963 FBtr0340126|FBtr0087016|FBtr0087017|FBtr0300573 17016344|17016344|17016224|17016344 17016965|17016965|17016965|17016965 AAGACT 6mer3-8 dme-miR-14-3p 2R - 17016430 17016488 3'utr CG8963 FlyBase G18325.1 CACGCAGCTGCACTCAAAGACTCGTACTCATATGCGCACCCACACACTTGCATGGCACA 25 17016464 0.931795035 4 25 94 1 1.612783857 0.146341463 0.44 0.658536585 25 0 0 41 2R:17016430-17016488 6 22.5 1104 FBgn0034181 880.38 38.95666667 59.94333333 0.025557146 0.577564816 0.375354501 -8 -8 -8 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 17016685 17016691 - 2R_17016685_17016691_- 0.801965065 0.801621028 0.801793047 0.000243315 CG8963 FBtr0087017|FBtr0087017|FBtr0087017|FBtr0300573|FBtr0300573|FBtr0300573|FBtr0340126|FBtr0340126|FBtr0340126|FBtr0087016|FBtr0087016|FBtr0087016 17016224|17016224|17016224|17016344|17016344|17016344|17016344|17016344|17016344|17016344|17016344|17016344 17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965 2R - 17016641 17016731 3'utr CG8963 FlyBase G24205.1 AATATGACATGTGTTAATGACTTTGTTCGAACGCTTTTTGTGTGATACGCCCGTTTTGTATCTCTGATAACTAACTCTCTGCCATGATAGC 29 17016693 0.987794464 14 29 257 1 1.602059991 0.3 0.24137931 0.45 29 0 0 40 2R:17016641-17016731 7 CG8963 FBtr0340126|FBtr0340126|FBtr0340126|FBtr0087016|FBtr0087016|FBtr0087016|FBtr0087017|FBtr0087017|FBtr0087017|FBtr0300573|FBtr0300573|FBtr0300573 17016344|17016344|17016344|17016344|17016344|17016344|17016224|17016224|17016224|17016344|17016344|17016344 17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 17016663 17016715 3'utr CG8963 FlyBase G18326.1 ATGACTTTGTTCGAACGCTTTTTGTGTGATACGCCCGTTTTGTATCTCTGATA 14 17016695 0.751333013 7 13 136 0.863636364 1.278753601 0.181818182 0.428571429 0.636363636 14 3 0 19 2R:17016663-17016715 7 15.5 1105 FBgn0034181 880.38 38.95666667 59.94333333 0.017606034 0.397877984 0.258577545 2 4 3 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 17016757 17016763 - 2R_17016757_17016763_- 0.760546273 0.683891531 0.722218902 0.054203129 CG8963 FBtr0087017|FBtr0087017|FBtr0087017|FBtr0300573|FBtr0300573|FBtr0300573|FBtr0340126|FBtr0340126|FBtr0340126|FBtr0087016|FBtr0087016|FBtr0087016 17016224|17016224|17016224|17016344|17016344|17016344|17016344|17016344|17016344|17016344|17016344|17016344 17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965 2R - 17016738 17016896 3'utr CG8963 FlyBase G24206.1 GGTATAGGAGGGATGGTGGAGAGCGTAGGAGTGGAGCATTTCCAACAAATTCTCGGTTGTAGGATCGATGATTGCAGTTGCTTGGTTCAGAACCAATTGTGATTATCTTTTAAATTATTGATAGCAAATTGTTTGTGATATCTTCGTGTTTCATGCACC 49 17016765 0.988369235 18 46 421 0.949152542 1.748188027 0.288135593 0.183673469 0.322033898 49 3 0 56 2R:17016738-17016896 7 CG8963 FBtr0340126|FBtr0340126|FBtr0340126|FBtr0087016|FBtr0087016|FBtr0087016|FBtr0087017|FBtr0087017|FBtr0087017|FBtr0300573|FBtr0300573|FBtr0300573 17016344|17016344|17016344|17016344|17016344|17016344|17016224|17016224|17016224|17016344|17016344|17016344 17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 17016736 17016780 3'utr CG8963 FlyBase G18327.1 ATTGATAGCAAATTGTTTGTGATATCTTCGTGTTTCATGCACCTA 21 17016765 0.989504091 7 21 207 1 1.531478917 0.264705882 0.476190476 0.676470588 21 0 0 34 2R:17016736-17016780 7 24 1106 FBgn0034181 880.38 38.95666667 59.94333333 0.027260955 0.616069137 0.400378135 2 2 2 0.15 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 17024875 17024880 + 2R_17024875_17024880_+ 0.984381339 0.999753701 0.99206752 0.010869928 Dark FBtr0086967 17023336 17026703 2R + 17024852 17024895 3'utr Dark FlyBase G16606.1 CCAGAGAGCGGACGCAACTTCTGGCTGTGGACTCCAAGGAGCGC 10 17024873 0.959727336 2 10 49 1 1 0.2 0 0 10 0 0 10 2R:17024852-17024895 6 Dark FBtr0086967 17023336 17026703 GCTGTG 6mer2-7 dme-miR-1008-3p 2R + 17024851 17024895 3'utr Dark FlyBase G12629.1 ACCAGAGAGCGGACGCAACTTCTGGCTGTGGACTCCAAGGAGCGC 5 17024873 0.94947794 2 5 22 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 2R:17024851-17024895 6 7.5 1107 FBgn0263864 792.71 19.97666667 30.85666667 0.009461215 0.375438011 0.243059306 2 2 2 0.15 dme-miR-283-5p 7mer-m8 TGATATT 2R 17025158 17025164 + 2R_17025158_17025164_+ 0.586378921 0.60042169 0.593400305 0.009929759 Dark FBtr0086967 17023336 17026703 2R + 17025100 17025178 3'utr Dark FlyBase G16608.1 CTCAAACAGGTCAGTCCCAACATTCTGGTGGCGTCGGCACACAGTGCCCAGAAGACTGTGATATTCCAGCTGGAAAAGA 23 17025162 0.96525622 7 22 117 0.964285714 1.130333768 0.142857143 0.173913043 0.321428571 23 0 1 27 2R:17025100-17025178 7 Dark FBtr0086967 17023336 17026703 TGATATT 7mer-m8 dme-miR-283-5p 2R + 17025111 17025177 3'utr Dark FlyBase G12631.1 CAGTCCCAACATTCTGGTGGCGTCGGCACACAGTGCCCAGAAGACTGTGATATTCCAGCTGGAAAAG 16 17025162 0.952402022 6 16 73 1 1.431363764 0.222222222 0.375 0.62962963 16 0 0 27 2R:17025111-17025177 7 17 1108 FBgn0263864 792.71 19.97666667 30.85666667 0.021445421 0.850992825 0.550934428 -4 -4 -4 0.15 dme-bantam-3p 6mer3-8 TGATCT 2R 17025776 17025781 + 2R_17025776_17025781_+ 0.938692372 0.967995988 0.95334418 0.020720774 Dark FBtr0086967 17023336 17026703 2R + 17025765 17025800 3'utr Dark FlyBase G16609.1 AAAAGTTCAACTGATCTACAGCATTGAAGAGGTCCA 10 17025776 0.913875658 2 10 48 1 1.230448921 0.176470588 0.4 0.647058824 10 0 0 17 2R:17025765-17025800 6 Dark FBtr0086967 17023336 17026703 TGATCT 6mer3-8 dme-bantam-3p 2R + 17025763 17025791 3'utr Dark FlyBase G12632.1 AGAAAAGTTCAACTGATCTACAGCATTGA 6 17025776 0.766501969 2 6 25 1 0.903089987 0.25 0.333333333 0.5 6 0 0 8 2R:17025763-17025791 6 7.5 1109 FBgn0263864 792.71 19.97666667 30.85666667 0.009461215 0.375438011 0.243059306 0 0 0 0.15 dme-miR-283-5p 6mer3-8 TGATAT 2R 17026612 17026617 + 2R_17026612_17026617_+ 0.99820775 0.999733777 0.998970764 0.001079045 Dark FBtr0086968|FBtr0086967 17026427|17023336 17026703|17026703 2R + 17026598 17026634 3'utr Dark FlyBase G16611.1 CAGCTAACCAAGTATGATATCTCAGAGGGCGGTGGGT 11 17026612 0.749278143 2 10 57 0.923076923 1.079181246 0.692307692 0.181818182 0.307692308 11 1 0 12 2R:17026598-17026634 6 Dark FBtr0086968|FBtr0086967 17026427|17023336 17026703|17026703 TGATAT 6mer3-8 dme-miR-283-5p 2R + 17026595 17026637 3'utr Dark FlyBase G12633.1 ATGCAGCTAACCAAGTATGATATCTCAGAGGGCGGTGGGTGCG 8 17026612 0.762766389 3 8 45 1 1.113943352 0.769230769 0.5 0.692307692 8 0 0 13 2R:17026595-17026637 6 9.5 1110 FBgn0263864 792.71 19.97666667 30.85666667 0.011984206 0.475554814 0.307875122 0 0 0 0.15 dme-miR-968-5p 6mer3-8 ACTACT 2R 17044445 17044450 + 2R_17044445_17044450_+ 0.99782736 0.998478873 0.998153116 0.00046068 RhoGEF2 FBtr0086969|FBtr0086970|FBtr0305083|FBtr0340124|FBtr0086971 17044319|17044319|17044319|17044319|17044319 17044653|17044653|17044653|17044653|17044653 2R + 17044421 17044542 3'utr RhoGEF2 FlyBase G16657.1 AGCCTTTCTTAGAGCATGCCTTTTACTACTGTTAATGTAGCTTCATTTGTTTTCTTAAAATATTATGTATTCCACAAGAGCCGATAACACTTTAAATTAAGTCTAACATTGTCCCCTCGTAA 27 17044441 0.840200575 14 27 195 1 1.462397998 0.068965517 0.074074074 0.137931034 27 0 0 29 2R:17044421-17044542 6 RhoGEF2 FBtr0086969|FBtr0086971|FBtr0340124|FBtr0305083|FBtr0086970 17044319|17044319|17044319|17044319|17044319 17044653|17044653|17044653|17044653|17044653 ACTACT 6mer3-8 dme-miR-968-5p 2R + 17044416 17044451 3'utr RhoGEF2 FlyBase G12669.1 CGAGTAGCCTTTCTTAGAGCATGCCTTTTACTACTG 11 17044442 0.690506111 4 9 93 0.875 0.84509804 0.1875 0.272727273 0.5 11 1 1 14 2R:17044416-17044451 6 8 1111 FBgn0023172 2916.61 41.36666667 63.45333333 0.00274291 0.193392425 0.126076907 4 3 3.5 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 2R 17053546 17053552 + 2R_17053546_17053552_+ 0.362786885 0.487763847 0.425275366 0.088372013 CG9646 FBtr0086974|FBtr0340125 17053524|17053524 17053855|17053855 2R + 17053547 17053673 3'utr CG9646 FlyBase G16672.1 GTGATTTATATGCTTTATAGTTCTCACATGTATTCCCTATTTATCGATCGAATGTGTGACCAGTCTGTGTGATCAGTCCCAGTTTGATTTATCAGTATATATGCTATGTTCTCGACCAATGTTGAGT 23 17053555 0.990850039 11 21 213 0.931034483 1.130333768 0.068965517 0.217391304 0.379310345 23 1 1 27 2R:17053547-17053673 5 CG9646 FBtr0086974|FBtr0340125 17053524|17053524 17053855|17053855 TGTGATT 7mer-m1 dme-miR-308-3p 2R + 17053541 17053576 3'utr CG9646 FlyBase G12680.1 GCAATTGTGATTTATATGCTTTATAGTTCTCACATG 9 17053556 0.673756293 7 9 96 1 1.204119983 0.0625 0.555555556 0.75 9 0 0 16 2R:17053541-17053576 7 8.5 1112 FBgn0034184 559.1833333 20.39333333 31.34666667 0.015200739 0.416802877 0.271161208 -9 -10 -9.5 0.15 dme-miR-988-3p 7mer-m1 CAAGGGG 2R 17059422 17059428 - 2R_17059422_17059428_- 0.535007306 0.467762232 0.501384769 0.047549466 CG8950 FBtr0306810 17059329 17059943 2R - 17059421 17059445 3'utr CG8950 FlyBase G24223.1 AGAAAGCTTTAAGTGATCAAGGGGA 6 17059436 0.563147404 4 6 24 1 0.77815125 0 0 0 6 0 0 6 2R:17059421-17059445 7 CG8950 FBtr0306810 17059329 17059943 CAAGGGG 7mer-m1 dme-miR-988-3p 2R - 17059419 17059447 3'utr CG8950 FlyBase G18344.1 CTAGAAAGCTTTAAGTGATCAAGGGGAAA 6 17059436 0.776191181 4 6 27 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 2R:17059419-17059447 7 5.5 1113 FBgn0034186 159.6633333 6.763333333 10.41 0.034447483 0.813208477 0.528338136 8 8 8 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 17092972 17092979 + 2R_17092972_17092979_+ 0.625364269 0.625364145 0.625364207 1.41E-07 CG6984 FBtr0086979 17092926 17093070 2R + 17092942 17092992 3'utr CG6984 FlyBase G16685.1 ATGAAATAATGAATCAAAACTGACCAATTGTGCATTTATACTTTTAAGCTT 29 17092970 0.853743806 8 28 236 1 1.544068044 0 0.172413793 0.314285714 29 0 0 35 2R:17092942-17092992 8 CG6984 FBtr0086979 17092926 17093070 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 17092944 17093002 3'utr CG6984 FlyBase G12690.1 GAAATAATGAATCAAAACTGACCAATTGTGCATTTATACTTTTAAGCTTGAATTGTCCA 22 17092969 0.991127551 9 20 210 0.9375 1.176091259 0.09375 0.409090909 0.59375 22 1 1 30 2R:17092944-17093002 8 23 1114 FBgn0034191 139.3066667 16.87666667 25.83666667 0.165103369 1.362828363 0.890207715 2 3 2.5 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 17107370 17107375 + 2R_17107370_17107375_+ 1 0.707183564 0.853591782 0.207052462 CG30456 FBtr0273337|FBtr0333550|FBtr0273336 17107135|17107135|17107135 17107542|17107542|17107542 2R + 17107230 17107397 3'utr CG30456 FlyBase G16699.1 ACATCTGGAGCTGCCAGTGGCGGCCAATTGTCGGGGGCCATTGAGCCAAGTCAATATTCGAAATTGTTTCAAATTGCTGCTCATTGTTTGTGGCACAAGGAGATCGGGAGTCGAACGCCTTTCGCTTTGAATGCTAAGTAACCAAATATTGAATTATAAGTGTAACTT 64 17107378 0.806464372 18 60 475 0.947368421 1.556302501 0.276315789 0.171875 0.302631579 64 3 1 72 2R:17107230-17107397 6 CG30456 FBtr0273336|FBtr0333550|FBtr0273337 17107135|17107135|17107135 17107542|17107542|17107542 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 17107230 17107400 3'utr CG30456 FlyBase G12698.1 ACATCTGGAGCTGCCAGTGGCGGCCAATTGTCGGGGGCCATTGAGCCAAGTCAATATTCGAAATTGTTTCAAATTGCTGCTCATTGTTTGTGGCACAAGGAGATCGGGAGTCGAACGCCTTTCGCTTTGAATGCTAAGTAACCAAATATTGAATTATAAGTGTAACTTGTT 65 17107378 0.875417105 21 64 446 1 1.954242509 0.233333333 0.292307692 0.488888889 65 0 0 90 2R:17107230-17107400 6 19.5 1115 FBgn0050456 173 7.583333333 11.60333333 0.112716763 2.571428571 1.680551566 -8 -8 -8 0.15 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2R 17139564 17139570 - 2R_17139564_17139570_- 0.744326819 0.606802414 0.675564617 0.097244436 CG43103 FBtr0304891|FBtr0304891 17139448|17139448 17139638|17139638 2R - 17139565 17139604 3'utr CG43103 FlyBase G24240.1 TATCAGAACGTGCTACAAGCTGTGTTTTTATTGATACTTA 10 17139578 0.834868946 6 10 100 1 1.204119983 0 0.4 0.625 10 0 0 16 2R:17139565-17139604 5 CG43103 FBtr0304891|FBtr0304891 17139448|17139448 17139638|17139638 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2R - 17139565 17139633 3'utr CG43103 FlyBase G18355.1 CAAGCTCTGAAGATCGATTTAAAGTTCAATATCAGAACGTGCTACAAGCTGTGTTTTTATTGATACTTA 11 17139579 0.758944397 8 11 88 1 1.079181246 0.25 0.090909091 0.166666667 11 0 0 12 2R:17139565-17139633 5 2.5 1116 FBgn0262563 14 4.063333333 6.323333333 0.178571429 0.615258409 0.395361096 8 9 8.5 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 17364026 17364033 + 2R_17364026_17364033_+ 0.499074161 0.499023312 0.499048736 3.60E-05 mbl FBtr0336940|FBtr0306604|FBtr0306606|FBtr0306603|FBtr0336941|FBtr0306601|FBtr0336942 17363985|17363985|17363985|17363985|17363985|17363985|17363985 17365386|17365386|17365386|17365386|17365386|17365386|17365386 2R + 17363975 17364093 stop_codon mbl FlyBase G16726.1 AAGACCTCCTAAGAACCCGGGCGATAACAATCTAAAAGTCCAAACACAACTGTACTTAATGCACCAAGCCATCGAACAGATGGAATAGTCACACCATTTTAGATTTATAGATATAAACA 304 17364025 0.959092407 10 299 1403 0.986072423 2.549003262 0.08356546 0.138157895 0.270194986 304 5 0 354 2R:17363975-17364093 8 mbl FBtr0336942|FBtr0306603|FBtr0336941|FBtr0306601|FBtr0306604|FBtr0306606|FBtr0336940 17363985|17363985|17363985|17363985|17363985|17363985|17363985 17365386|17365386|17365386|17365386|17365386|17365386|17365386 GTACTTAA 8mer-A1 dme-miR-252-5p 2R + 17364000 17364092 3'utr mbl FlyBase G12713.1 AACAATCTAAAAGTCCAAACACAACTGTACTTAATGCACCAAGCCATCGAACAGATGGAATAGTCACACCATTTTAGATTTATAGATATAAAC 195 17364025 0.892764008 6 188 905 0.967213115 2.16879202 0.101639344 0.394871795 0.613114754 195 9 1 295 2R:17364000-17364092 8 239 1117 FBgn0265487 1263.543333 28.89333333 44.05 0.189150616 8.271804338 5.425652667 1 1 1 0.15 dme-miR-999-3p 7mer-m8 AGTTAAC 2R 17364465 17364471 + 2R_17364465_17364471_+ 0.674034299 0.644001597 0.659017948 0.021236326 mbl FBtr0336940|FBtr0306604|FBtr0306606|FBtr0306603|FBtr0336941|FBtr0306601|FBtr0336942 17363985|17363985|17363985|17363985|17363985|17363985|17363985 17365386|17365386|17365386|17365386|17365386|17365386|17365386 2R + 17364410 17364486 3'utr mbl FlyBase G16728.1 GAGAAACAGATGTTAGATGATAGTAATACTTAAGTTCCTTTTTTGAATAGCTCTTAGTTAACTCTAGTTTATAGGAA 10 17364463 0.937767874 7 9 97 0.916666667 1.041392685 0 0.2 0.333333333 10 1 0 11 2R:17364410-17364486 7 mbl FBtr0336942|FBtr0306603|FBtr0336941|FBtr0306601|FBtr0306604|FBtr0306606|FBtr0336940 17363985|17363985|17363985|17363985|17363985|17363985|17363985 17365386|17365386|17365386|17365386|17365386|17365386|17365386 AGTTAAC 7mer-m8 dme-miR-999-3p 2R + 17364397 17364496 3'utr mbl FlyBase G12716.1 CAAGCGAACGGAAGAGAAACAGATGTTAGATGATAGTAATACTTAAGTTCCTTTTTTGAATAGCTCTTAGTTAACTCTAGTTTATAGGAAACGGTCACAC 11 17364449 0.989237958 8 10 93 1 1.176091259 0 0.363636364 0.533333333 11 0 0 15 2R:17364397-17364496 7 4 1118 FBgn0265487 1263.543333 28.89333333 44.05 0.003165701 0.13844024 0.090805902 2 16 9 0.15 dme-miR-184-3p 6mer2-7 CCGTCC 2R 17364695 17364700 + 2R_17364695_17364700_+ 0.999454595 0.999795267 0.999624931 0.000240911 mbl FBtr0336940|FBtr0306604|FBtr0306606|FBtr0306603|FBtr0336941|FBtr0306601|FBtr0336942 17363985|17363985|17363985|17363985|17363985|17363985|17363985 17365386|17365386|17365386|17365386|17365386|17365386|17365386 2R + 17364617 17364722 3'utr mbl FlyBase G16730.1 AAACCTCTAATGCTGCTGCCGATGCTGGGTACAGTTGTGTATGCTTGTTGCTAGCTGCGGGTGCTTAATGCCATATTGCCGTCCCTGTCTCCCAAATGCGGTAGTT 165 17364693 0.768736806 15 159 1188 0.969543147 1.803912113 0.147208122 0.145454545 0.284263959 165 4 2 191 2R:17364617-17364722 6 mbl FBtr0336942|FBtr0306603|FBtr0336941|FBtr0306601|FBtr0306604|FBtr0306606|FBtr0336940 17363985|17363985|17363985|17363985|17363985|17363985|17363985 17365386|17365386|17365386|17365386|17365386|17365386|17365386 CCGTCC 6mer2-7 dme-miR-184-3p 2R + 17364679 17364721 3'utr mbl FlyBase G12718.1 GCTTAATGCCATATTGCCGTCCCTGTCTCCCAAATGCGGTAGT 62 17364693 0.745579698 5 58 426 0.947916667 1.959041392 0.135416667 0.370967742 0.59375 62 5 0 91 2R:17364679-17364721 6 104 1119 FBgn0265487 1263.543333 28.89333333 44.05 0.082308218 3.599446239 2.360953462 2 2 2 0.15 dme-miR-1012-3p 6mer2-7 TGACTA 2R 17405370 17405375 - 2R_17405370_17405375_- 0.958473957 0.535604208 0.747039082 0.299014103 CG6568 FBtr0086964|FBtr0340144 17405302|17405302 17405480|17405480 2R - 17405351 17405390 3'utr CG6568 FlyBase G24252.1 ATGCAATGTAGAAACTGACTATTAACAAGTACGATTAAAA 13 17405369 0.965291875 4 12 66 0.9375 1.176091259 0.125 0.230769231 0.375 13 1 0 15 2R:17405351-17405390 6 CG6568 FBtr0086964|FBtr0340144 17405302|17405302 17405480|17405480 TGACTA 6mer2-7 dme-miR-1012-3p 2R - 17405365 17405400 3'utr CG6568 FlyBase G18361.1 TGTATTGTTAATGCAATGTAGAAACTGACTATTAAC 8 17405369 0.956460221 5 7 51 0.928571429 1.113943352 0 0.25 0.571428571 8 1 0 13 2R:17405365-17405400 6 10 1120 FBgn0034210 337.2533333 24.08333333 37.00333333 0.029651301 0.415224913 0.270245924 -6 -6 -6 0.15 dme-miR-7-5p 7mer-m8 GTCTTCC 2R 17414419 17414425 - 2R_17414419_17414425_- 0.705950313 0.705949705 0.705950009 4.24E-07 cnk FBtr0086962|FBtr0340214 17413968|17413968 17414572|17414572 2R - 17414401 17414476 3'utr cnk FlyBase G24265.1 ATATAGCGATATTCTCGTACGATTTAGGTATACAACTTGTTCATTTTGATCGTCTTCCCTGTCTGTCCACCAGAAA 93 17414422 0.697757003 14 89 1018 0.963302752 1.720159303 0.220183486 0.150537634 0.275229358 93 3 1 105 2R:17414401-17414476 7 cnk FBtr0086962|FBtr0340214 17413968|17413968 17414572|17414572 GTCTTCC 7mer-m8 dme-miR-7-5p 2R - 17414402 17414486 3'utr cnk FlyBase G18369.1 TATATATTATATATAGCGATATTCTCGTACGATTTAGGTATACAACTTGTTCATTTTGATCGTCTTCCCTGTCTGTCCACCAGAA 65 17414422 0.991835438 14 65 715 1 1.986771734 0.206185567 0.369230769 0.577319588 65 0 0 97 2R:17414402-17414486 7 73.5 1121 FBgn0021818 1145.12 24.51333333 37.43 0.064185413 2.998368235 1.963665509 -3 -3 -3 0.15 dme-miR-184-5p 6mer3-8 TGATAA 2R 17448658 17448663 - 2R_17448658_17448663_- 0.987511444 0.998488614 0.993000029 0.007762053 mthl3 FBtr0340211|FBtr0340212|FBtr0086955 17448531|17448531|17448531 17449117|17449117|17449117 2R - 17448608 17448823 3'utr mthl3 FlyBase G24317.1 GTGCCATCAAAGCGAGATCAAAGCAACTACTACATGGGGATATGTACGAATCTTATAGGCATGAATACTCGGCATTTATATACCCTGGTCTATTATTATGGATGGAGGATAAAAACTCAGGAAAATACTTTTCGCATCAGCACTTATGTATGCTCACTCGTGATAATAATTTCGTAATAATTCGTACTGTTTTTACTGCCTCAACTTAATTCAAAG 61 17448657 0.971349439 24 58 411 0.961038961 1.86923172 0.233766234 0.196721311 0.363636364 61 3 0 74 2R:17448608-17448823 6 mthl3 FBtr0086955|FBtr0340212|FBtr0340211 17448531|17448531|17448531 17449117|17449117|17449117 TGATAA 6mer3-8 dme-miR-184-5p 2R - 17448646 17448790 3'utr mthl3 FlyBase G18404.1 ATGGGGATATGTACGAATCTTATAGGCATGAATACTCGGCATTTATATACCCTGGTCTATTATTATGGATGGAGGATAAAAACTCAGGAAAATACTTTTCGCATCAGCACTTATGTATGCTCACTCGTGATAATAATTTCGTAAT 28 17448693 0.949251958 19 25 189 0.948717949 1.091080469 0.102564103 0.321428571 0.512820513 28 0 2 37 2R:17448646-17448790 6 20.5 1122 FBgn0028956 336.38 20.09333333 30.48333333 0.060942981 1.020238885 0.672498633 -6 30 12 0.15 dme-miR-317-3p 6mer2-7 GTGTTC 2R 17464316 17464321 + 2R_17464316_17464321_+ 0.921533209 0.909201261 0.915367235 0.00871997 CG14478 FBtr0345418|FBtr0086921|FBtr0086922|FBtr0345417 17464232|17464232|17464232|17464232 17465795|17465580|17465580|17465580 2R + 17464246 17464400 3'utr CG14478 FlyBase G16785.1 GAGCAACCAGGATGTGGACAGGGCTTAGAGCACTTGACCGCTATGGCGGTCGTGCAGGCGGACAATGATCGTGTTCCAGAACCTGATCCGAGGAGTAGGCGCTCCTCGGCGTCTGTCAGAGGCCGGAGAGCGAAGGAAGAAAATCTTTATATACA 89 17464317 0.946717142 15 85 370 0.972477064 2.025305865 0.293577982 0.204545455 0.357798165 88 3 0 106 2R:17464246-17464400 6 CG14478 FBtr0345417|FBtr0086922|FBtr0086921|FBtr0345418 17464232|17464232|17464232|17464232 17465580|17465580|17465580|17465795 GTGTTC 6mer2-7 dme-miR-317-3p 2R + 17464288 17464341 3'utr CG14478 FlyBase G12765.2 ATGGCGGTCGTGCAGGCGGACAATGATCGTGTTCCAGAACCTGATCCGAGGAGT 73 17464317 0.672446897 4 69 305 0.935779817 2.008600172 0.321100917 0.383561644 0.587155963 73 7 0 102 2R:17464288-17464341 6 68.5 1123 FBgn0028953 686.9066667 21.63 33.22666667 0.099722427 3.166897827 2.061597111 -1 -1 -1 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT 2R 17465345 17465351 + 2R_17465345_17465351_+ 0.656527868 0.655445556 0.655986712 0.000765302 CG14478 FBtr0345418|FBtr0086921|FBtr0086922|FBtr0345417 17464232|17464232|17464232|17464232 17465795|17465580|17465580|17465580 2R + 17465323 17465372 3'utr CG14478 FlyBase G16790.1 TTCCTTGACTACCACCACCCATGGCAGCTTCCTGGGAGCTCCATTGGGGG 51 17465344 0.985752785 2 49 222 0.946428571 1.72427587 0.142857143 0.098039216 0.178571429 51 3 0 53 2R:17465323-17465372 7 CG14478 FBtr0345417|FBtr0086922|FBtr0086921|FBtr0345418 17464232|17464232|17464232|17464232 17465580|17465580|17465580|17465795 GGCAGCT 7mer-m8 dme-miR-980-3p 2R + 17465315 17465365 3'utr CG14478 FlyBase G12770.1 ACGCAAACTTCCTTGACTACCACCACCCATGGCAGCTTCCTGGGAGCTCCA 30 17465344 0.99460853 3 30 130 1 1.612783857 0.12195122 0.366666667 0.536585366 30 0 0 41 2R:17465315-17465365 7 39.5 1124 FBgn0028953 686.9066667 21.63 33.22666667 0.057504173 1.82616736 1.188804173 1 1 1 0.15 dme-miR-304-5p 8mer-A1 TGAGATTA 2R 17473681 17473688 + 2R_17473681_17473688_+ 0.625340965 0.625361112 0.625351039 1.42E-05 qkr54B FBtr0306248|FBtr0331464 17472244|17473146 17474648|17475129 2R + 17473656 17473703 3'utr qkr54B FlyBase G16798.1 TGACGGTCGGTAGAGACAGAATCTATGAGATTAATTAACTTAATAGAA 14 17473681 0.981784032 2 14 95 1 1.278753601 0 0.214285714 0.421052632 14 0 0 19 2R:17473656-17473703 8 qkr54B FBtr0306248|FBtr0331464 17472244|17473146 17474648|17475129 TGAGATTA 8mer-A1 dme-miR-304-5p 2R + 17473656 17473704 3'utr qkr54B FlyBase G12775.1 TGACGGTCGGTAGAGACAGAATCTATGAGATTAATTAACTTAATAGAAT 10 17473681 0.783293786 3 8 68 0.714285714 0.698970004 0 0.2 0.428571429 10 3 1 10 2R:17473656-17473704 8 10 1125 FBgn0022987 869.43 42.83333333 65.55 0.011501789 0.233463035 0.152555301 0 0 0 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 17517269 17517276 + 2R_17517269_17517276_+ 0.500080278 0.500112902 0.50009659 2.31E-05 CG4853 FBtr0340216|FBtr0086938|FBtr0086939 17517103|17517103|17517103 17517445|17517445|17517445 2R + 17517246 17517282 3'utr CG4853 FlyBase G16812.1 ACTTCCACTGTGTTTGTTAATTTGTACTTAAGCTTAG 17 17517268 0.755638286 4 17 189 1 1.278753601 0.157894737 0.117647059 0.210526316 17 0 0 19 2R:17517246-17517282 8 CG4853 FBtr0086939|FBtr0340216|FBtr0086938 17517103|17517103|17517103 17517445|17517445|17517445 GTACTTAA 8mer-A1 dme-miR-252-5p 2R + 17517231 17517289 3'utr CG4853 FlyBase G12784.1 AATAATAACTCTTACACTTCCACTGTGTTTGTTAATTTGTACTTAAGCTTAGACGACGG 18 17517268 0.855340985 6 17 161 0.962962963 1.414973348 0.259259259 0.388888889 0.592592593 18 1 0 26 2R:17517231-17517289 8 16 1126 FBgn0034230 943.6633333 39.8 60.59666667 0.016955199 0.40201005 0.264040926 1 1 1 0.15 dme-miR-965-3p 8mer-A1 TACGCTTA 2R 17555736 17555743 + 2R_17555736_17555743_+ 0.622667378 0.62326312 0.622965249 0.000421224 MESR4 FBtr0086946|FBtr0113090|FBtr0340220|FBtr0340219 17555653|17555653|17555653|17555653 17556289|17556289|17556289|17556289 2R + 17555705 17555792 3'utr MESR4 FlyBase G16855.2 CTATAACTACAAACCCCACTACAGAATGGATTACGCTTATTAATTGATAAAAACATATAGTCGCTCATCCCTGGCGATCGTCTAAGGA 1513 17555735 0.834839678 14 1488 12703 0.983954155 2.535800291 0.026361032 0.134170522 0.249283668 1513 24 4 1717 2R:17555705-17555792 8 MESR4 FBtr0340219|FBtr0340220|FBtr0113090|FBtr0086946 17555653|17555653|17555653|17555653 17556289|17556289|17556289|17556289 TACGCTTA 8mer-A1 dme-miR-965-3p 2R + 17555655 17555797 3'utr MESR4 FlyBase G12825.1 ATGAACACGGATTAACTGCATCATTGGTTCCTCCTACCACAAATAAACAACTATAACTACAAACCCCACTACAGAATGGATTACGCTTATTAATTGATAAAAACATATAGTCGCTCATCCCTGGCGATCGTCTAAGGATAAGA 808 17555735 0.825484833 20 790 6518 0.981974922 2.49589108 0.028996865 0.403465347 0.622257053 808 20 3 1253 2R:17555655-17555797 8 1144.5 1127 FBgn0034240 1589.276667 23.95 36.81 0.720138931 47.78705637 31.09209454 1 1 1 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT 2R 17572155 17572161 + 2R_17572155_17572161_+ 0.658371483 0.658315266 0.658343374 3.97E-05 POSH FBtr0086828 17572001 17572322 2R + 17572120 17572180 3'utr POSH FlyBase G16875.1 AAAAAGAAACCGTTTTGTACTCTTCCAATCGAATGGGCAGCTCGCCGTTGTACTTTTTTAT 94 17572153 0.934780543 9 90 665 0.951456311 1.991226076 0.330097087 0.085106383 0.165048544 94 5 0 98 2R:17572120-17572180 7 POSH FBtr0086828 17572001 17572322 GGCAGCT 7mer-m8 dme-miR-980-3p 2R + 17572127 17572179 3'utr POSH FlyBase G12838.1 AACCGTTTTGTACTCTTCCAATCGAATGGGCAGCTCGCCGTTGTACTTTTTTA 71 17572153 0.931401221 9 67 478 0.942307692 1.514104821 0.182692308 0.338028169 0.548076923 71 4 2 98 2R:17572127-17572179 7 76.5 1128 FBgn0040294 488.92 18.72 28.71333333 0.156467316 4.086538462 2.664267472 2 2 2 0.15 dme-miR-305-3p 6mer2-7 TGTGCC 2R 17572279 17572284 + 2R_17572279_17572284_+ 0.996408834 0.987482332 0.991945583 0.006311989 POSH FBtr0086828 17572001 17572322 2R + 17572227 17572320 3'utr POSH FlyBase G16876.1 GTTACTTAAGCCTTAGCGATTAGTTAGCTAGAGAAATAATCTAACCGATCCTTGTGCCCTCTACAAAGTTATTTGTAATATACGATACTCAGTA 32 17572279 0.71423791 11 30 209 0.948717949 1.091080469 0.128205128 0.1875 0.333333333 32 0 2 37 2R:17572227-17572320 6 POSH FBtr0086828 17572001 17572322 TGTGCC 6mer2-7 dme-miR-305-3p 2R + 17572261 17572296 3'utr POSH FlyBase G12839.1 AATAATCTAACCGATCCTTGTGCCCTCTACAAAGTT 11 17572280 0.703449157 2 11 63 1 1.230448921 0.352941176 0.454545455 0.647058824 11 0 0 17 2R:17572261-17572296 6 16 1129 FBgn0040294 488.92 18.72 28.71333333 0.03272519 0.854700855 0.557232412 0 -1 -0.5 0.15 dme-miR-305-3p 8mer-m1 ATGTGCCG 2R 17573205 17573212 + 2R_17573205_17573212_+ 0.628736528 0.628709685 0.628723107 1.90E-05 CG42239 FBtr0290307 17573200 17573330 2R + 17573156 17573220 stop_codon CG42239 FlyBase G16880.1 TAATTGCTATCAAGACTACGAACCAGAGAAGCAAAAGGATACGTAGACTATGTGCCGGGTTGGAT 23 17573206 0.750190263 11 22 103 0.96 1.380211242 0.36 0.086956522 0.16 23 1 0 24 2R:17573156-17573220 8 CG42239 FBtr0290307 17573200 17573330 ATGTGCCG 8mer-m1 dme-miR-305-3p 2R + 17573179 17573226 stop_codon CG42239 FlyBase G12841.2 CAGAGAAGCAAAAGGATACGTAGACTATGTGCCGGGTTGGATTACCAG 32 17573206 0.636370999 5 30 147 0.9375 1.352182518 0.395833333 0.375 0.583333333 32 2 1 45 2R:17573179-17573226 8 23.5 1130 FBgn0250868 189.67 62.33666667 95.58 0.123899404 0.376985188 0.245867336 -1 -1 -1 0.15 dme-miR-11-3p 7mer-m1 TGTGATG 2R 17573277 17573283 + 2R_17573277_17573283_+ 0.610929337 0.6109913 0.610960318 4.38E-05 CG42239 FBtr0290307 17573200 17573330 2R + 17573247 17573298 3'utr CG42239 FlyBase G16881.1 TTTATTGCATATATGTATGTATGCAAATTGTGTGATGAATAGAAGAGGGTTT 29 17573275 0.977089508 6 27 214 0.916666667 1.51851394 0.333333333 0.24137931 0.388888889 29 3 0 33 2R:17573247-17573298 7 CG42239 FBtr0290307 17573200 17573330 TGTGATG 7mer-m1 dme-miR-11-3p 2R + 17573238 17573302 3'utr CG42239 FlyBase G12842.1 TTTTATACTTTTATTGCATATATGTATGTATGCAAATTGTGTGATGAATAGAAGAGGGTTTTTGA 30 17573275 0.982820351 6 30 232 1 1.653212514 0.244444444 0.433333333 0.622222222 30 0 0 45 2R:17573238-17573302 7 28.5 1131 FBgn0250868 189.67 62.33666667 95.58 0.15026098 0.457194802 0.298179535 2 2 2 0.15 dme-miR-999-3p 6mer2-7 GTTAAC 2R 17574753 17574758 + 2R_17574753_17574758_+ 0.731957549 0.999837538 0.865897544 0.189419765 Rab4 FBtr0086830 17574541 17574979 2R + 17574723 17574768 3'utr Rab4 FlyBase G16889.1 AATTACCACTTTGAAAACCTATGATTTCGGGTTAACCCCAAATGTT 36 17574745 0.703837061 6 34 275 0.928571429 1.591064607 0.095238095 0.166666667 0.285714286 36 3 0 39 2R:17574723-17574768 6 Rab4 FBtr0086830 17574541 17574979 GTTAAC 6mer2-7 dme-miR-999-3p 2R + 17574723 17574765 3'utr Rab4 FlyBase G12846.1 AATTACCACTTTGAAAACCTATGATTTCGGGTTAACCCCAAAT 16 17574744 0.634952727 6 14 115 0.913043478 1.322219295 0.043478261 0.3125 0.52173913 16 2 0 21 2R:17574723-17574765 6 23.5 1132 FBgn0016701 790.7133333 73.45333333 112.1433333 0.02972 0.319931022 0.20955325 8 9 8.5 0.15 dme-bantam-3p 6mer3-8 TGATCT 2R 17574846 17574851 + 2R_17574846_17574851_+ 1 0.999422989 0.999711494 0.000408001 Rab4 FBtr0086830 17574541 17574979 2R + 17574769 17574865 3'utr Rab4 FlyBase G16890.1 ACTTACTATAATTTGTAATTCGTGAAGCACTAGAGCCCTCGAGCAACAAATGATGTATGGCTATAAGCACATGGATCTGATCTAGAGGATGAACAGA 27 17574846 0.966987433 11 25 137 0.939393939 1.491361694 0.575757576 0.185185185 0.333333333 27 2 0 31 2R:17574769-17574865 6 Rab4 FBtr0086830 17574541 17574979 TGATCT 6mer3-8 dme-bantam-3p 2R + 17574817 17574886 3'utr Rab4 FlyBase G12847.1 AATGATGTATGGCTATAAGCACATGGATCTGATCTAGAGGATGAACAGAATACACTCGGCATTTTTAATG 17 17574858 0.958350866 7 17 89 1 1.447158031 0.357142857 0.411764706 0.642857143 17 0 0 28 2R:17574817-17574886 6 14.5 1133 FBgn0016701 790.7133333 73.45333333 112.1433333 0.018337872 0.197404248 0.129298814 0 -12 -6 0.15 dme-miR-276a-3p 6mer3-8 AGTTCC 2R 17670655 17670660 + 2R_17670655_17670660_+ 0.612513567 0.908079946 0.760296757 0.208996935 CG30109 FBtr0340271 17670505 17670748 2R + 17670616 17670675 3'utr CG30109 FlyBase G16941.1 CAGCCTAGGTCTACCAAGTACCAGAAGCAGCTTTGGTTTAGTTCCATGACTCGTATCCTT 12 17670662 0.823895082 6 12 88 1 1.113943352 0 0.083333333 0.153846154 12 0 0 13 2R:17670616-17670675 6 CG30109 FBtr0340271 17670505 17670748 AGTTCC 6mer3-8 dme-miR-276a-3p 2R + 17670606 17670670 3'utr CG30109 FlyBase G12890.1 AGTGGAGGAACAGCCTAGGTCTACCAAGTACCAGAAGCAGCTTTGGTTTAGTTCCATGACTCGTA 13 17670649 0.968555069 6 13 71 1 1.447158031 0.178571429 0.615384615 0.821428571 13 0 0 28 2R:17670606-17670670 6 6 1134 FBgn0050109 105.4166667 22.59 34.48 0.056916996 0.26560425 0.174013921 -7 6 -0.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 17673099 17673105 - 2R_17673099_17673105_- 0.80191415 0.80192818 0.801921165 9.97E-06 Sema-1b FBtr0086891|FBtr0086891|FBtr0086891|FBtr0086890|FBtr0086890|FBtr0086890 17672837|17672837|17672837|17672837|17672837|17672837 17674309|17674309|17674309|17674309|17674309|17674309 2R - 17673061 17673131 3'utr Sema-1b FlyBase G24433.1 AAACGTAATGTAATGATTTCTCATATTGTGATAGATTTTATTGAAATTTTAGAAAGATGAAATGATATGCC 147 17673106 0.991906343 8 140 1552 0.956756757 1.645913275 0.459459459 0.210884354 0.372972973 147 5 3 177 2R:17673061-17673131 7 Sema-1b FBtr0086890|FBtr0086890|FBtr0086890|FBtr0086891|FBtr0086891|FBtr0086891 17672837|17672837|17672837|17672837|17672837|17672837 17674309|17674309|17674309|17674309|17674309|17674309 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 17673090 17673132 3'utr Sema-1b FlyBase G18485.1 AAAACGTAATGTAATGATTTCTCATATTGTGATAGATTTTATT 95 17673106 0.751582062 6 93 987 0.98630137 1.857332496 0.328767123 0.347368421 0.575342466 95 1 1 144 2R:17673090-17673132 7 120 1135 FBgn0016059 2585.713333 78.05 119.2733333 0.046408857 1.537475977 1.006092449 1 1 1 0.15 dme-miR-282-5p 6mer2-7 GAGGCT 2R 17673567 17673572 - 2R_17673567_17673572_- 0.99976223 0.999687195 0.999724712 5.30E-05 Sema-1b FBtr0086891|FBtr0302161|FBtr0086890 17672837|17673285|17672837 17674309|17674309|17674309 2R - 17673537 17673638 3'utr Sema-1b FlyBase G24435.1 TAAGGAATTGAACATAGAATGTAATTAAAAGTACGAACTAGGCTAAGAAACGAAGAAAACTTCTATGAGGCTGTTTGATAAGAACTGACACCGCAGCCCCCA 250 17673573 0.99021527 11 243 1776 0.975945017 1.976197085 0.18556701 0.144 0.264604811 250 5 2 284 2R:17673537-17673638 6 Sema-1b FBtr0086890|FBtr0302161|FBtr0086891 17672837|17673285|17672837 17674309|17674309|17674309 GAGGCT 6mer2-7 dme-miR-282-5p 2R - 17673535 17673594 3'utr Sema-1b FlyBase G18488.1 AAGAAACGAAGAAAACTTCTATGAGGCTGTTTGATAAGAACTGACACCGCAGCCCCCACA 170 17673573 0.981792446 8 163 1198 0.958333333 1.662757832 0.2375 0.311764706 0.5125 170 6 4 230 2R:17673535-17673594 6 202.5 1136 FBgn0016059 2585.713333 78.05 119.2733333 0.078314946 2.594490711 1.697781007 1 1 1 0.15 dme-bantam-3p 6mer2-7 GATCTC 2R 17690185 17690190 + 2R_17690185_17690190_+ 0.999960213 0.999994678 0.999977446 2.44E-05 HPS4 FBtr0086839|FBtr0086840 17690041|17690041 17690822|17690822 2R + 17690145 17690210 3'utr HPS4 FlyBase G16946.1 GAATAGCCAACTTAATGCCATCCACTGTTATTTCATTTGCGATCTCTGGCTGATTCCTTCGTGAGT 258 17690181 0.890951336 11 244 2630 0.948717949 1.772321707 0.298076923 0.186046512 0.326923077 258 12 4 296 2R:17690145-17690210 6 HPS4 FBtr0086839|FBtr0086840 17690041|17690041 17690822|17690822 GATCTC 6mer2-7 dme-bantam-3p 2R + 17690130 17690211 3'utr HPS4 FlyBase G12894.1 GTCTGGGTCCCCGAAGAATAGCCAACTTAATGCCATCCACTGTTATTTCATTTGCGATCTCTGGCTGATTCCTTCGTGAGTC 153 17690181 0.879159978 15 140 1519 0.894495413 1.511883361 0.408256881 0.320261438 0.52293578 153 18 5 195 2R:17690130-17690211 6 157.5 1137 FBgn0034261 255.3 8.836666667 13.49666667 0.616921269 17.82346284 11.66954804 4 4 4 0.15 dme-miR-190-5p 6mer2-7 CATATC 2R 17725246 17725251 - 2R_17725246_17725251_- 0.879490795 0.895848229 0.887669512 0.011566428 Snx16 FBtr0086885 17725028 17725381 2R - 17725219 17725323 3'utr Snx16 FlyBase G24461.1 ATTATGCTGAGCATAACTCTACGCAACTGCGCCGCTTGGATGCAAATCCAATACAATAATACAAACCAAGTGCATATCGAGGGGTTGGCCCCTACAGTGCTTTAG 85 17725253 0.959123511 10 83 400 0.97826087 1.954242509 0.010869565 0.082352941 0.152173913 85 2 0 90 2R:17725219-17725323 6 Snx16 FBtr0086885 17725028 17725381 CATATC 6mer2-7 dme-miR-190-5p 2R - 17725227 17725267 3'utr Snx16 FlyBase G18506.1 TAATACAAACCAAGTGCATATCGAGGGGTTGGCCCCTACAG 29 17725253 0.97676911 2 28 134 0.981132075 1.716003344 0 0.482758621 0.716981132 29 1 0 52 2R:17725227-17725267 6 55 1138 FBgn0034265 197.3333333 14.34666667 22.20333333 0.278716216 3.833643123 2.47710554 2 2 2 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 2R 17734456 17734461 - 2R_17734456_17734461_- 0.999906839 0.999914725 0.999910782 5.59E-06 CG6406 FBtr0086883|FBtr0086884 17734417|17734417 17735315|17735315 2R - 17734426 17734474 3'utr CG6406 FlyBase G24467.1 TATTTATTGAACGTTGACTTGAACCATGTTATTGATTTAAAATAAATAC 9 17734461 0.938153825 3 9 82 1 0.954242509 0.222222222 0 0 9 0 0 9 2R:17734426-17734474 6 CG6406 FBtr0086883|FBtr0086884 17734417|17734417 17735315|17735315 TTGACT 6mer3-8 dme-miR-1012-3p 2R - 17734427 17734483 3'utr CG6406 FlyBase G18510.1 ACATACAAATATTTATTGAACGTTGACTTGAACCATGTTATTGATTTAAAATAAATA 9 17734461 0.75691775 5 9 78 1 1.113943352 0.076923077 0.222222222 0.461538462 9 0 0 13 2R:17734427-17734483 6 8.5 1139 FBgn0034269 376.6666667 16.84333333 25.91666667 0.022566372 0.504650703 0.327974277 0 0 0 0.15 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 17734916 17734921 - 2R_17734916_17734921_- 0.998048466 0.999067061 0.998557763 0.000720259 CG6406 FBtr0086883|FBtr0086884 17734417|17734417 17735315|17735315 2R - 17734768 17734933 3'utr CG6406 FlyBase G24468.1 TCGCCACCTACCGCTGTGTATTAGCCGAATAGAACCGTGGCTCGAAATTTGAATTTATGGCATAAGCATCGTTTGAGTTTGTTGACTTTGATGGGTTTTCTTAGTTGTTCGTATGTATTATCGTATTCCAAATCCAATTGTTGGTTAGATTAAGTGTTGCTAGGAC 19 17734913 0.984658693 13 19 168 1 1.278753601 0.315789474 0 0 19 0 0 19 2R:17734768-17734933 6 CG6406 FBtr0086883|FBtr0086884 17734417|17734417 17735315|17735315 GCTGTG 6mer2-7 dme-miR-1008-3p 2R - 17734880 17734943 3'utr CG6406 FlyBase G18511.1 ATGTGTACATTCGCCACCTACCGCTGTGTATTAGCCGAATAGAACCGTGGCTCGAAATTTGAAT 10 17734925 0.746540287 8 9 59 0.866666667 0.636822098 0.2 0.4 0.6 10 0 2 13 2R:17734880-17734943 6 6.5 1140 FBgn0034269 376.6666667 16.84333333 25.91666667 0.017256637 0.385909361 0.250803859 -8 4 -2 0.15 dme-miR-304-5p 8mer-A1 TGAGATTA 2R 17841112 17841119 + 2R_17841112_17841119_+ 0.625061432 0.624305897 0.624683664 0.000534219 grh FBtr0300539|FBtr0306625|FBtr0300541|FBtr0299705|FBtr0299707|FBtr0345791|FBtr0299706 17840873|17840873|17840873|17840873|17840873|17840873|17840873 17842820|17841528|17841528|17841613|17841613|17841613|17841613 2R + 17841090 17841127 5'utr grh FlyBase G17014.1 GATTTAGTTATTTTAGCAACAATGAGATTATCTAAAAT 17 17841112 0.952336697 3 16 133 1 1.230448921 0 0 0 17 0 0 17 2R:17841090-17841127 8 grh FBtr0299706|FBtr0299707|FBtr0345791|FBtr0300541|FBtr0299705|FBtr0300539|FBtr0306625 17840873|17840873|17840873|17840873|17840873|17840873|17840873 17841613|17841613|17841613|17841528|17841613|17842820|17841528 TGAGATTA 8mer-A1 dme-miR-304-5p 2R + 17841095 17841144 5'utr grh FlyBase G12955.1 AGTTATTTTAGCAACAATGAGATTATCTAAAATTGTTTGATCAAATTTTA 13 17841112 0.979994809 2 12 91 1 1.278753601 0.105263158 0.384615385 0.578947368 13 0 0 19 2R:17841095-17841144 8 13.5 1141 FBgn0259211 11.04666667 0.27 0.426666667 1.222088111 50 31.640625 0 0 0 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 17859909 17859915 + 2R_17859909_17859915_+ 0.801638144 0.801613003 0.801625573 1.77E-05 olf186-F FBtr0086795|FBtr0086795|FBtr0086795|FBtr0086797|FBtr0086797|FBtr0086797|FBtr0336699|FBtr0336699|FBtr0336699|FBtr0114614|FBtr0114614|FBtr0114614|FBtr0336698|FBtr0336698|FBtr0336698 17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793 17860582|17860582|17860582|17860582|17860582|17860582|17860582|17860582|17860582|17860284|17860284|17860284|17860582|17860582|17860582 2R + 17859883 17859939 3'utr olf186-F FlyBase G17044.1 ATTGTAAATTTGTAGTTGATTAAAATTGTGATACGCGGAATTCAGTAGATTTCTACT 413 17859908 0.719855606 17 384 3002 0.940357853 1.352641846 0.355864811 0.181598063 0.328031809 413 10 20 473 2R:17859883-17859939 7 olf186-F FBtr0336698|FBtr0336698|FBtr0336698|FBtr0114614|FBtr0114614|FBtr0114614|FBtr0336699|FBtr0336699|FBtr0336699|FBtr0086797|FBtr0086797|FBtr0086797|FBtr0086795|FBtr0086795|FBtr0086795 17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793 17860582|17860582|17860582|17860284|17860284|17860284|17860582|17860582|17860582|17860582|17860582|17860582|17860582|17860582|17860582 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 17859885 17859940 3'utr olf186-F FlyBase G12974.2 TGTAAATTTGTAGTTGATTAAAATTGTGATACGCGGAATTCAGTAGATTTCTACTA 288 17859908 0.72611939 12 258 2037 0.90521327 1.303309762 0.362559242 0.374125874 0.575829384 286 22 18 382 2R:17859885-17859940 7 338 1142 FBgn0041585 1045.89 35.90333333 55.08666667 0.323169741 9.414167672 6.135786034 1 1 1 0.15 dme-miR-283-5p 6mer3-8 TGATAT 2R 17860314 17860319 + 2R_17860314_17860319_+ 0.999999956 0.999995405 0.999997681 3.25E-06 olf186-F FBtr0086795|FBtr0086797|FBtr0336699|FBtr0336698 17859793|17859793|17859793|17859793 17860582|17860582|17860582|17860582 2R + 17860289 17860329 3'utr olf186-F FlyBase G17046.1 GGTGTTGGAGTTTTATTTTTAATCGTGATATATAGCTGAAC 8 17860310 0.981825556 5 8 83 1 0.954242509 0.222222222 0.125 0.222222222 8 0 0 9 2R:17860289-17860329 6 olf186-F FBtr0336698|FBtr0336699|FBtr0086797|FBtr0086795 17859793|17859793|17859793|17859793 17860582|17860582|17860582|17860582 TGATAT 6mer3-8 dme-miR-283-5p 2R + 17860300 17860329 3'utr olf186-F FlyBase G12977.1 TTTATTTTTAATCGTGATATATAGCTGAAC 13 17860307 0.57907223 5 13 125 1 1.230448921 0.411764706 0.230769231 0.411764706 13 0 0 17 2R:17860300-17860329 6 10.5 1143 FBgn0041585 1045.89 35.90333333 55.08666667 0.010039297 0.292451954 0.190608738 4 7 5.5 0.15 dme-bantam-3p 6mer3-8 TGATCT 2R 17867199 17867204 - 2R_17867199_17867204_- 0.999997887 0.999046831 0.999522359 0.000672529 Mapmodulin FBtr0086822|FBtr0300410|FBtr0086823|FBtr0113091 17866176|17866317|17866317|17867036 17867209|17867209|17867209|17867209 2R - 17867172 17867226 stop_codon Mapmodulin FlyBase G24543.1 GAAAGCATGATGGTTAAAACCCTGATCTGTCGGTATAGCGTCTTTGTACGTTATA 23 17867204 0.714524877 7 22 170 0.966666667 1.161368002 0.133333333 0.260869565 0.433333333 23 0 1 29 2R:17867172-17867226 6 Mapmodulin FBtr0300410|FBtr0086822|FBtr0086823 17866317|17866176|17866317 17867209|17867209|17867209 TGATCT 6mer3-8 dme-bantam-3p 2R - 17867151 17867219 stop_codon Mapmodulin FlyBase G18567.1 TGATGGTTAAAACCCTGATCTGTCGGTATAGCGTCTTTGTACGTTATAAATTTAAATATACACCCACAC 7 17867204 0.980005899 5 7 53 1 1 0 0.428571429 0.6 7 0 0 10 2R:17867151-17867219 6 14.5 1144 FBgn0034282 4492.536667 281.28 432.79 0.003227575 0.051550057 0.033503547 0 0 0 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2R 18100562 18100567 + 2R_18100562_18100567_+ 0.992901761 0.998691119 0.99579644 0.004093653 CG5098 FBtr0329994|FBtr0346952|FBtr0113092|FBtr0086732 18100252|18100207|18100207|18100207 18101031|18101031|18101031|18101031 2R + 18100531 18100626 3'utr CG5098 FlyBase G17062.1 ATTTTTTCGCATAGTCCAGAACTTTACATTAGTACCTTTTAGTTCTAACTAATTTTAAAACCACCAGCCCATGTCCTATGCCCACCCATCTGCATC 76 18100569 0.864456841 14 75 707 0.989010989 1.954242509 0.142857143 0.157894737 0.296703297 76 1 0 90 2R:18100531-18100626 6 CG5098 FBtr0113092|FBtr0086732|FBtr0329994|FBtr0346952 18100207|18100207|18100252|18100207 18101031|18101031|18101031|18101031 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2R + 18100504 18100620 3'utr CG5098 FlyBase G12992.1 GTTTATGTTTAAGATACGTCCTAAATTATTTTTTCGCATAGTCCAGAACTTTACATTAGTACCTTTTAGTTCTAACTAATTTTAAAACCACCAGCCCATGTCCTATGCCCACCCATC 62 18100569 0.989677844 12 60 590 0.957446809 1.954242509 0.117021277 0.322580645 0.553191489 62 4 0 90 2R:18100504-18100620 6 52.5 1145 FBgn0034300 227 5.456666667 8.356666667 0.231277533 9.6212584 6.282409254 -7 -7 -7 0.15 dme-miR-8-3p 8mer-A1 CAGTATTA 2R 18118379 18118386 - 2R_18118379_18118386_- 0.649361199 0.644676641 0.64701892 0.003312512 stau FBtr0086783|FBtr0086784 18117894|18117894 18119780|18119780 2R - 18118351 18118425 3'utr stau FlyBase G24567.2 AGCCCCAGCGAACTGTAACCGTTGAAATGAAGTCAATCCCAGTATTAAATGTATAGATAGGGGGCAGTTGTGCGT 19 18118389 0.974347486 7 15 114 0.875 1.322219295 0.125 0.263157895 0.416666667 19 3 0 21 2R:18118351-18118425 8 stau FBtr0086784|FBtr0086783 18117894|18117894 18119780|18119780 CAGTATTA 8mer-A1 dme-miR-8-3p 2R - 18118359 18118426 3'utr stau FlyBase G18586.1 AAGCCCCAGCGAACTGTAACCGTTGAAATGAAGTCAATCCCAGTATTAAATGTATAGATAGGGGGCAG 9 18118389 0.968322356 6 8 43 1 1.322219295 0.142857143 0.666666667 0.857142857 9 0 0 21 2R:18118359-18118426 8 9 1146 FBgn0003520 789.19 18.35 28.11 0.011404098 0.490463215 0.320170758 3 3 3 0.15 dme-miR-932-5p 7mer-A1 GAATTGA 2R 18119471 18119477 - 2R_18119471_18119477_- 0.816362886 0.823317479 0.819840182 0.004917645 stau FBtr0086783|FBtr0086784 18117894|18117894 18119780|18119780 2R - 18119419 18119480 3'utr stau FlyBase G24574.1 TGAGAATTGAATAACGAATCGAACTGATAGTAACCGAAACTGAACAGAGGCGAACACTTAAC 14 18119453 0.939947215 5 14 54 1 1.255272505 0.166666667 0.285714286 0.444444444 14 0 0 18 2R:18119419-18119480 7 stau FBtr0086784|FBtr0086783 18117894|18117894 18119780|18119780 GAATTGA 7mer-A1 dme-miR-932-5p 2R - 18119421 18119479 3'utr stau FlyBase G18591.1 GAGAATTGAATAACGAATCGAACTGATAGTAACCGAAACTGAACAGAGGCGAACACTTA 17 18119452 0.955733922 7 15 67 0.913043478 1.322219295 0.47826087 0.294117647 0.47826087 17 2 0 21 2R:18119421-18119479 7 8.5 1147 FBgn0003520 789.19 18.35 28.11 0.010770537 0.463215259 0.302383493 -24 -25 -24.5 0.15 dme-miR-92b-3p 7mer-m1 TGCAATT 2R 18119736 18119742 - 2R_18119736_18119742_- 0.764960542 0.765583301 0.765271922 0.000440386 stau FBtr0086783|FBtr0086784 18117894|18117894 18119780|18119780 2R - 18119710 18119794 stop_codon stau FlyBase G24578.1 ATGCCATGAAATAAGCATAAAGCGCTGAAAATTTCACAAAACCCTTATTAACTGCAATTTTTGTTGTTGCACATAAGCATGATAA 28 18119744 0.989184775 12 23 213 0.833333333 1.176091259 0.027777778 0.214285714 0.388888889 28 5 1 30 2R:18119710-18119794 7 stau FBtr0086784|FBtr0301614|FBtr0086783 18117894|18119622|18117894 18119780|18119780|18119780 TGCAATT 7mer-m1 dme-miR-92b-3p 2R - 18119711 18119775 3'utr stau FlyBase G18594.1 AAGCGCTGAAAATTTCACAAAACCCTTATTAACTGCAATTTTTGTTGTTGCACATAAGCATGATA 23 18119741 0.993817712 7 15 187 0.675 1.431363764 0.075 0.434782609 0.675 23 13 0 27 2R:18119711-18119775 7 19 1148 FBgn0003520 789.19 18.35 28.11 0.024075318 1.035422343 0.675916044 2 -1 0.5 0.15 dme-miR-283-5p 6mer3-8 TGATAT 2R 18130559 18130564 - 2R_18130559_18130564_- 0.839944219 0.804433307 0.822188763 0.025109998 Hsf FBtr0086782|FBtr0110965|FBtr0110966|FBtr0110964 18130301|18130301|18130301|18130301 18130754|18130754|18130754|18130754 2R - 18130501 18130612 3'utr Hsf FlyBase G24589.1 CACTATAATCATATGAATGATCTGTATATGCCTTATGCACTATATATATGATATATAGACTAACCAGTTCTTGTTGTAGAAAGACTCGAAGAATCAGTAAAGATTTAGATTT 49 18130557 0.98706046 10 46 403 0.945454545 1.716003344 0.018181818 0.081632653 0.181818182 49 3 0 52 2R:18130501-18130612 6 Hsf FBtr0110966|FBtr0110964|FBtr0086782|FBtr0110965 18130301|18130301|18130301|18130301 18130754|18130754|18130754|18130754 TGATAT 6mer3-8 dme-miR-283-5p 2R - 18130519 18130639 3'utr Hsf FlyBase G18603.1 GATTCATACGATAATCACATTAATAACCACTATAATCATATGAATGATCTGTATATGCCTTATGCACTATATATATGATATATAGACTAACCAGTTCTTGTTGTAGAAAGACTCGAAGAAT 35 18130557 0.985614319 12 34 282 0.976190476 1.311753861 0.071428571 0.2 0.333333333 35 0 1 41 2R:18130519-18130639 6 17.5 1149 FBgn0001222 975.6666667 42.15 64.28666667 0.017936454 0.415183867 0.272218189 -7 -7 -7 0.15 dme-bantam-3p 6mer3-8 TGATCT 2R 18130590 18130595 - 2R_18130590_18130595_- 0.951751785 0.640170306 0.795961045 0.220321392 Hsf FBtr0086782|FBtr0110965|FBtr0110966|FBtr0110964 18130301|18130301|18130301|18130301 18130754|18130754|18130754|18130754 2R - 18130501 18130612 3'utr Hsf FlyBase G24589.1 CACTATAATCATATGAATGATCTGTATATGCCTTATGCACTATATATATGATATATAGACTAACCAGTTCTTGTTGTAGAAAGACTCGAAGAATCAGTAAAGATTTAGATTT 49 18130595 0.98706046 10 46 403 0.945454545 1.716003344 0.018181818 0.081632653 0.181818182 49 3 0 52 2R:18130501-18130612 6 Hsf FBtr0110966|FBtr0110964|FBtr0086782|FBtr0110965 18130301|18130301|18130301|18130301 18130754|18130754|18130754|18130754 TGATCT 6mer3-8 dme-bantam-3p 2R - 18130519 18130639 3'utr Hsf FlyBase G18603.1 GATTCATACGATAATCACATTAATAACCACTATAATCATATGAATGATCTGTATATGCCTTATGCACTATATATATGATATATAGACTAACCAGTTCTTGTTGTAGAAAGACTCGAAGAAT 35 18130595 0.985614319 12 34 282 0.976190476 1.311753861 0.071428571 0.2 0.333333333 35 0 1 41 2R:18130519-18130639 6 20.5 1150 FBgn0001222 975.6666667 42.15 64.28666667 0.021011274 0.486358244 0.318884165 0 0 0 0.15 dme-miR-980-5p 6mer3-8 GAAAAA 2R 18139387 18139392 + 2R_18139387_18139392_+ 0.998373763 0.995658265 0.997016014 0.001920148 Pcl FBtr0086735|FBtr0329998 18139235|18139235 18139442|18139990 2R + 18139345 18139432 3'utr Pcl FlyBase G17085.1 TGTTAATGTTTAAAAGTTTATTACCAACCCACTGCCAAAATAGAAAAAGATTGTTCAAAATATTGGTTCAGCATTAAAGCGATAAAAT 19 18139395 0.961262431 6 19 98 1 1.342422681 0.136363636 0.157894737 0.272727273 19 0 0 22 2R:18139345-18139432 6 Pcl FBtr0086735|FBtr0329998 18139235|18139235 18139442|18139990 GAAAAA 6mer3-8 dme-miR-980-5p 2R + 18139357 18139428 3'utr Pcl FlyBase G13008.1 AAAGTTTATTACCAACCCACTGCCAAAATAGAAAAAGATTGTTCAAAATATTGGTTCAGCATTAAAGCGATA 13 18139395 0.800346722 7 13 70 1 1.176091259 0.066666667 0.153846154 0.266666667 13 0 0 15 2R:18139357-18139428 6 11.5 1151 FBgn0003044 1047.913333 31.18 47.85 0.01097419 0.368826171 0.240334378 -8 -8 -8 0.15 dme-miR-988-3p 7mer-A1 CAAGGGA 2R 18146837 18146843 + 2R_18146837_18146843_+ 0.78210245 0.782888441 0.782495446 0.000555786 pAbp FBtr0086740 18145219 18147191 2R + 18146675 18146952 3'utr pAbp FlyBase G17106.1 AAACAAATAAAAACCCAAGGAAAAATCATTGAAAAAATTGCAAAACACAAAACCACATGTATGCAGAAAATGCAAAATTATTTAAAAAAAACAAACAAACAAAATAATGAGAGTAAAACAGAAAAAAAAAACATAACCAAAACCCGAATTGGAATGTTAGTTCAAGGGAAATTGCGAAGAAGAAAACTTTTACTTTTCACGAAATATACGCAAGTCAACACACTTCTATATATAGCAGATATATATATGTATCCTTATATATTAAAGCGAAATAAAAC 86 18146835 0.972309948 27 79 454 0.93814433 1.356981401 0.092783505 0.127906977 0.226804124 86 3 3 91 2R:18146675-18146952 7 pAbp FBtr0086740 18145219 18147191 CAAGGGA 7mer-A1 dme-miR-988-3p 2R + 18146661 18146858 3'utr pAbp FlyBase G13033.1 AAATCGAAAACTAAAAACAAATAAAAACCCAAGGAAAAATCATTGAAAAAATTGCAAAACACAAAACCACATGTATGCAGAAAATGCAAAATTATTTAAAAAAAACAAACAAACAAAATAATGAGAGTAAAACAGAAAAAAAAAACATAACCAAAACCCGAATTGGAATGTTAGTTCAAGGGAAATTGCGAAGAAGAA 40 18146834 0.952382821 16 37 162 0.940298507 1.498310554 0.23880597 0.5 0.701492537 40 3 1 63 2R:18146661-18146858 7 21 1152 FBgn0265297 43597.22333 1372.25 2113.58 0.000481682 0.015303334 0.009935749 2 3 2.5 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 2R 18147416 18147422 - 2R_18147416_18147422_- 0.59396699 0.482309701 0.538138345 0.078953634 CG17680 FBtr0086781 18147295 18147588 2R - 18147279 18147440 3'utr CG17680 FlyBase G24602.1 AAGAATCCGCGCAGCTCTTGCATTTTTTGTGTATTGTCGTGTATTCTTCAAGTCCCGCTTTGATATTTTCGCTTTCTGAATGTTAACTATGCTCGTTAAATACTTGAATGTACTAGAATTAAATAAAGTTTATTCGACTATGCTTAAAACCTGTCTGTTATT 49 18147423 0.987563768 18 46 411 0.950819672 1.286306739 0.31147541 0.183673469 0.344262295 49 1 2 58 2R:18147279-18147440 7 CG17680 FBtr0086781 18147295 18147588 TGCATTT 7mer-m8 dme-miR-277-3p 2R - 18147316 18147438 3'utr CG17680 FlyBase G18613.1 GAATCCGCGCAGCTCTTGCATTTTTTGTGTATTGTCGTGTATTCTTCAAGTCCCGCTTTGATATTTTCGCTTTCTGAATGTTAACTATGCTCGTTAAATACTTGAATGTACTAGAATTAAATA 25 18147423 0.988304384 10 24 221 0.967741935 1.176091259 0.548387097 0.2 0.35483871 25 0 1 30 2R:18147316-18147438 7 13 1153 FBgn0062440 137 25.31333333 38.62666667 0.094890511 0.513563339 0.336555057 1 1 1 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 2R 18147544 18147549 - 2R_18147544_18147549_- 0.95849414 0.981405202 0.969949671 0.016200594 CG17680 FBtr0086781 18147295 18147588 2R - 18147527 18147597 stop_codon CG17680 FlyBase G24604.1 GAGGATTAAGCATCCGGACACTTGACAATCTCCATGTGGGAGTGCCTCCTAGTCGGGATAAATGTGTTGGC 26 18147553 0.934363125 6 22 138 0.821428571 1.06069784 0.464285714 0.076923077 0.142857143 26 4 1 23 2R:18147527-18147597 6 CG17680 FBtr0086781 18147295 18147588 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 2R - 18147527 18147571 3'utr CG17680 FlyBase G18615.1 AATCTCCATGTGGGAGTGCCTCCTAGTCGGGATAAATGTGTTGGC 18 18147552 0.730883113 6 17 102 0.96969697 1.505149978 0.515151515 0.611111111 0.787878788 18 1 0 32 2R:18147527-18147571 6 17.5 1154 FBgn0062440 137 25.31333333 38.62666667 0.127737226 0.691335265 0.453054884 4 3 3.5 0.15 dme-miR-308-3p 8mer-m1 CTGTGATT 2R 18148475 18148482 - 2R_18148475_18148482_- 0.24977087 0.288256973 0.269013921 0.027213782 CG5742 FBtr0329999|FBtr0086780|FBtr0330000 18148094|18148462|18148462 18149675|18149675|18149549 2R - 18148463 18148505 3'utr CG5742 FlyBase G24606.1 TAGTTTCGGTTCGCATTGCTTTGCTGTGATTTTGCCCTCTTTA 33 18148484 0.729570457 4 32 380 0.973684211 1.568201724 0.263157895 0.151515152 0.263157895 33 1 0 37 2R:18148463-18148505 8 CG5742 FBtr0330000|FBtr0329999|FBtr0086780 18148462|18148094|18148462 18149549|18149675|18149675 CTGTGATT 8mer-m1 dme-miR-308-3p 2R - 18148465 18148504 3'utr CG5742 FlyBase G18616.1 AGTTTCGGTTCGCATTGCTTTGCTGTGATTTTGCCCTCTT 27 18148484 0.681693238 5 26 322 0.976744186 1.322219295 0.162790698 0.481481481 0.674418605 27 0 1 42 2R:18148465-18148504 8 30 1155 FBgn0034304 304 12.44333333 19.22666667 0.098684211 2.410929547 1.560332871 2 2 2 0.15 dme-miR-1003-3p 7mer-m8 ATGTGAG 2R 18154173 18154179 - 2R_18154173_18154179_- 0.671796207 0.671796207 0.671796207 0 lolal FBtr0086777 18154093 18155147 2R - 18154141 18154197 3'utr lolal FlyBase G24616.1 ATGTATGTATATGTATACATGTGAGCATAGATTTAAAGAAACTACGGTAAATAAACA 27 18154170 0.988774769 7 22 204 0.766666667 1.06069784 0.133333333 0.074074074 0.166666667 27 6 1 23 2R:18154141-18154197 7 lolal FBtr0086777 18154093 18155147 ATGTGAG 7mer-m8 dme-miR-1003-3p 2R - 18154134 18154197 3'utr lolal FlyBase G18621.1 ATGTATGTATATGTATACATGTGAGCATAGATTTAAAGAAACTACGGTAAATAAACAGAATAAT 21 18154182 0.987268663 8 17 145 0.810810811 1.477121255 0.162162162 0.476190476 0.702702703 21 7 0 30 2R:18154134-18154197 7 23.5 1156 FBgn0022238 614.5133333 54.55666667 83.64333333 0.038241644 0.430744791 0.280954848 -9 3 -3 0.15 dme-miR-283-5p 6mer2-7 GATATT 2R 18163556 18163561 + 2R_18163556_18163561_+ 0.767059591 0.99749157 0.882275581 0.16294003 CG10915 FBtr0345416|FBtr0086746 18163524|18163524 18164746|18164209 2R + 18163498 18163594 stop_codon CG10915 FlyBase G17120.1 GGCCGCGGGCACGGCGAAGCAGAATTAGACACCTACACTCAGACTTACATTAATAACCGATATTGGGCGTAGCGATAAGCGAAATACTCAAGCGGCG 13 18163559 0.96539504 8 11 54 0.8125 0.636822098 0.3125 0.230769231 0.375 13 1 2 13 2R:18163498-18163594 6 CG10915 FBtr0086746|FBtr0345416 18163524|18163524 18164209|18164746 GATATT 6mer2-7 dme-miR-283-5p 2R + 18163496 18163559 stop_codon CG10915 FlyBase G13042.1 ACGGCCGCGGGCACGGCGAAGCAGAATTAGACACCTACACTCAGACTTACATTAATAACCGATA 7 18163537 0.960910555 5 6 28 1 1 0.1 0.285714286 0.5 7 0 0 10 2R:18163496-18163559 4 4 1157 FBgn0034308 795.0233333 28.65333333 43.94333333 0.005031299 0.139599814 0.091026322 -3 19 8 0.15 dme-miR-305-5p 6mer2-7 GTACAA 2R 18164138 18164143 + 2R_18164138_18164143_+ 0.995683095 0.981998765 0.98884093 0.009676261 CG10915 FBtr0345416|FBtr0086746 18163524|18163524 18164746|18164209 2R + 18164083 18164191 3'utr CG10915 FlyBase G17122.1 AAGCCAAGAGACAAGCGACTTTAAATGTAATTCCGTACGTAGTAACCGAACATTTGTACAAGGCCGTGCGATTCTCATAACAAGTAACAGCCACAATATATGATAATTA 93 18164136 0.955038233 13 88 400 0.957264957 1.572096768 0.299145299 0.225806452 0.384615385 93 3 2 112 2R:18164083-18164191 6 CG10915 FBtr0086746|FBtr0345416 18163524|18163524 18164209|18164746 GTACAA 6mer2-7 dme-miR-305-5p 2R + 18164083 18164175 3'utr CG10915 FlyBase G13044.1 AAGCCAAGAGACAAGCGACTTTAAATGTAATTCCGTACGTAGTAACCGAACATTTGTACAAGGCCGTGCGATTCTCATAACAAGTAACAGCCA 81 18164136 0.955813876 12 79 367 0.982142857 2.041392685 0.303571429 0.283950617 0.482142857 81 2 0 110 2R:18164083-18164175 6 58 1158 FBgn0034308 795.0233333 28.65333333 43.94333333 0.072953834 2.024197301 1.319881666 2 2 2 0.15 dme-miR-980-3p 7mer-A1 GCAGCTA 2R 18164340 18164346 + 2R_18164340_18164346_+ 0.81436481 0.812326196 0.813345503 0.001441508 CG10915 FBtr0345416 18163524 18164746 2R + 18164292 18164421 3'utr CG10915 FlyBase G17123.2 ATAGTTCTTAGGTGCGTCGCATACGTGTGTAATCAACTTCCTCCATGTGCAGCTAACATACTGAATTATTTCGTAGTGTTTGATTTATATATTAAGTTCTAAGTTCGGCCTAAGCACCTTTGTTTGCCCG 136 18164337 0.981511724 18 129 890 0.958333333 1.90579588 0.035714286 0.183823529 0.339285714 136 6 1 161 2R:18164292-18164421 7 CG10915 FBtr0345416 18163524 18164746 GCAGCTA 7mer-A1 dme-miR-980-3p 2R + 18164289 18164389 3'utr CG10915 FlyBase G13045.2 TTAATAGTTCTTAGGTGCGTCGCATACGTGTGTAATCAACTTCCTCCATGTGCAGCTAACATACTGAATTATTTCGTAGTGTTTGATTTATATATTAAGTT 81 18164337 0.796114938 13 79 504 1 2.096910013 0.04 0.419753086 0.624 81 0 0 125 2R:18164289-18164389 7 91.5 1159 FBgn0034308 795.0233333 28.65333333 43.94333333 0.115090962 3.193345742 2.082227111 3 3 3 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 18164534 18164539 + 2R_18164534_18164539_+ 0.998352883 0.904469039 0.951410961 0.066385942 CG10915 FBtr0345416|FBtr0345416|FBtr0345416 18163524|18163524|18163524 18164746|18164746|18164746 2R + 18164518 18164626 3'utr CG10915 FlyBase G17124.1 ATTTTACAAATGCGTACTGTGAACATCCCTCCAGCCCCCCAGCAGCTTGGATTACCTTTTTAGTCAAAGGGCAGCAGCCAGTCAAGTAGTGTTGTTGGTACAATAAATA 48 18164543 0.764014351 14 43 293 0.877192982 1.096910013 0.333333333 0.125 0.263157895 48 4 3 50 2R:18164518-18164626 6 CG10915 FBtr0345416|FBtr0345416|FBtr0345416 18163524|18163524|18163524 18164746|18164746|18164746 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 18164518 18164619 3'utr CG10915 FlyBase G13047.1 ATTTTACAAATGCGTACTGTGAACATCCCTCCAGCCCCCCAGCAGCTTGGATTACCTTTTTAGTCAAAGGGCAGCAGCCAGTCAAGTAGTGTTGTTGGTACA 29 18164536 0.686504114 12 26 154 0.87755102 1.633468456 0.204081633 0.413793103 0.653061224 29 6 0 43 2R:18164518-18164619 6 14.5 1160 FBgn0034308 795.0233333 28.65333333 43.94333333 0.018238458 0.506049325 0.329970416 -9 -2 -5.5 0.15 dme-miR-33-5p 8mer-A1 CAATGCAA 2R 18164679 18164686 + 2R_18164679_18164686_+ 0.634552232 0.594713098 0.614632665 0.028170498 CG10915 FBtr0345416 18163524 18164746 2R + 18164643 18164698 3'utr CG10915 FlyBase G17125.1 AAGATATAAACAAAATGCGTATGAATAACAAGTTAGCAATGCAAGCGCGATCTATA 12 18164675 0.967743315 6 11 53 0.933333333 1.146128036 0.466666667 0.166666667 0.333333333 12 1 0 14 2R:18164643-18164698 8 CG10915 FBtr0345416 18163524 18164746 CAATGCAA 8mer-A1 dme-miR-33-5p 2R + 18164650 18164696 3'utr CG10915 FlyBase G13048.1 AAACAAAATGCGTATGAATAACAAGTTAGCAATGCAAGCGCGATCTA 6 18164675 0.952376707 2 4 25 1 0.77815125 0.166666667 0 0 6 0 0 6 2R:18164650-18164696 8 8 1161 FBgn0034308 795.0233333 28.65333333 43.94333333 0.010062598 0.279199628 0.182052644 4 4 4 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2R 18168991 18168996 - 2R_18168991_18168996_- 0.9998287 0.999949282 0.999888991 8.53E-05 Dgp-1 FBtr0086773|FBtr0086774 18168741|18168411 18169024|18169024 2R - 18168966 18169077 stop_codon Dgp-1 FlyBase G24640.1 ATCCTTCGTCGTCGTCCTCGGTTGAAGTCACACCGGCCGCTCTCACCGAGTGAAGTGCGCCGCCTGCATGTTTTGGCTCTTTCTAGTTTTGTAAACTAAAGTATTTTTTTTT 29 18168997 0.900177205 17 27 278 0.911764706 1.491361694 0.147058824 0.103448276 0.235294118 29 3 0 31 2R:18168966-18169077 6 Dgp-1 FBtr0086774|FBtr0086773 18168411|18168741 18169024|18169024 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2R - 18168973 18169107 stop_codon Dgp-1 FlyBase G18637.1 CGGCCTCTTTGGGTCTGCCCCTCGGCGAGAATCCTTCGTCGTCGTCCTCGGTTGAAGTCACACCGGCCGCTCTCACCGAGTGAAGTGCGCCGCCTGCATGTTTTGGCTCTTTCTAGTTTTGTAAACTAAAGTATT 32 18168997 0.949764327 12 32 262 1 1.707570176 0.117647059 0.5 0.68627451 32 0 0 51 2R:18168973-18169107 6 15.5 1162 FBgn0027836 713.1466667 32.87333333 49.73 0.02173466 0.471506794 0.311683089 1 1 1 0.15 dme-miR-1003-3p 6mer2-7 TGTGAG 2R 18175472 18175477 - 2R_18175472_18175477_- 0.999356714 0.999449588 0.999403151 6.57E-05 CG5726 FBtr0086772 18175253 18176079 2R - 18175426 18175498 3'utr CG5726 FlyBase G24656.1 ACGTATTTTTAAAGCAAATTTTGTGAGGCCCTCTGTTGGAACAACAAAGCCAAGCCGGAGTGCAGAGAAAAAC 66 18175478 0.973020183 7 62 449 0.931506849 1.355387658 0.054794521 0.106060606 0.191780822 66 3 2 68 2R:18175426-18175498 6 CG5726 FBtr0086772 18175253 18176079 TGTGAG 6mer2-7 dme-miR-1003-3p 2R - 18175454 18175498 3'utr CG5726 FlyBase G18656.1 ACGTATTTTTAAAGCAAATTTTGTGAGGCCCTCTGTTGGAACAAC 34 18175478 0.680497868 5 32 255 0.9375 1.352182518 0 0.323529412 0.520833333 34 2 1 45 2R:18175454-18175498 6 48 1163 FBgn0034313 580.9266667 20.17 30.98666667 0.082626608 2.379771939 1.549053356 1 1 1 0.15 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 18175678 18175685 - 2R_18175678_18175685_- 0.596153097 0.605653967 0.600903532 0.006718151 CG5726 FBtr0086772 18175253 18176079 2R - 18175666 18175697 3'utr CG5726 FlyBase G24658.1 GCTTAGAAACTAAGTACAAAGTCAATGAAAAA 5 18175672 0.866793604 4 5 18 1 0.903089987 0.375 0.6 0.75 5 0 0 8 2R:18175666-18175697 8 CG5726 FBtr0086772 18175253 18176079 AGTACAAA 8mer-A1 dme-miR-305-5p 2R - 18175658 18175701 3'utr CG5726 FlyBase G18657.1 AATTGCTTAGAAACTAAGTACAAAGTCAATGAAAAAACAAAAAT 6 18175696 0.977280583 4 5 25 0.857142857 0.77815125 0 0.166666667 0.285714286 6 1 0 6 2R:18175658-18175701 8 5 1164 FBgn0034313 580.9266667 20.17 30.98666667 0.008606938 0.24789291 0.161359725 -13 11 -1 0.15 dme-miR-14-3p 6mer2-7 AGACTG 2R 18175961 18175966 - 2R_18175961_18175966_- 0.990332737 0.99835821 0.994345473 0.005674885 CG5726 FBtr0086772 18175253 18176079 2R - 18175923 18176012 3'utr CG5726 FlyBase G24660.1 TGTTTCGCCTTCGTATATGTTTCCTAATGGATGTGTATATCCACGTAGACTGTTTTCACATTATTTTGTCTTCAACTGAGCTCAAATGTT 39 18175960 0.799523655 10 36 349 0.957446809 1.352182518 0.255319149 0.179487179 0.319148936 39 1 1 45 2R:18175923-18176012 6 CG5726 FBtr0086772 18175253 18176079 AGACTG 6mer2-7 dme-miR-14-3p 2R - 18175923 18175978 3'utr CG5726 FlyBase G18658.1 GTATATCCACGTAGACTGTTTTCACATTATTTTGTCTTCAACTGAGCTCAAATGTT 16 18175960 0.9852749 5 14 123 0.913043478 1.021189299 0.347826087 0.25 0.47826087 16 1 1 21 2R:18175923-18175978 6 16.5 1165 FBgn0034313 580.9266667 20.17 30.98666667 0.028402897 0.818046604 0.532487091 -6 -6 -6 0.15 dme-miR-1007-3p 7mer-m8 TGAGCTT 2R 18275681 18275687 - 2R_18275681_18275687_- 0.619548004 0.614913405 0.617230704 0.003277157 Ote FBtr0086768 18275605 18275804 2R - 18275637 18275700 3'utr Ote FlyBase G24678.1 TTTTGATGTAACTTGAGCTTGAGTTTGACTAGCATTTAAGCTGCGTGTTATCCGTGTTCAAATA 28 18275687 0.807666015 6 27 226 1 1.568201724 0.594594595 0.25 0.432432432 28 0 0 37 2R:18275637-18275700 7 Ote FBtr0086768 18275605 18275804 TGAGCTT 7mer-m8 dme-miR-1007-3p 2R - 18275638 18275714 3'utr Ote FlyBase G18673.1 TTGTATGAATCTTGTTTTGATGTAACTTGAGCTTGAGTTTGACTAGCATTTAAGCTGCGTGTTATCCGTGTTCAAAT 18 18275687 0.986411498 5 18 156 1 1.431363764 0.481481481 0.388888889 0.592592593 18 0 0 27 2R:18275638-18275714 7 18 1166 FBgn0266420 914.6666667 70.74 107.93 0.0196793 0.254452926 0.166774761 0 0 0 0.15 dme-miR-92b-3p 7mer-m1 TGCAATT 2R 18278583 18278589 - 2R_18278583_18278589_- 0.652793716 0.704821519 0.678807618 0.03678921 sbb FBtr0301550 18278196 18280102 2R - 18278576 18278609 3'utr sbb FlyBase G24684.1 AGGTTTTTTGACATTCTTAATGCAATTTGTAATC 14 18278593 0.757025235 3 14 139 1 1.204119983 0 0.142857143 0.25 14 0 0 16 2R:18278576-18278609 7 sbb FBtr0301550 18278196 18280102 TGCAATT 7mer-m1 dme-miR-92b-3p 2R - 18278576 18278619 3'utr sbb FlyBase G18674.1 AGGAGTCGCTAGGTTTTTTGACATTCTTAATGCAATTTGTAATC 13 18278593 0.987181019 5 12 115 1 1.342422681 0.090909091 0.538461538 0.727272727 13 0 0 22 2R:18278576-18278619 7 13 1167 FBgn0010575 986.7266667 17.07666667 26.24333333 0.013174875 0.761272692 0.495363902 4 4 4 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 2R 18279374 18279379 - 2R_18279374_18279379_- 0.999988879 0.999999287 0.999994083 7.35E-06 sbb FBtr0301550|FBtr0329997|FBtr0301551|FBtr0301547 18278196|18279063|18279063|18278978 18280102|18280048|18280102|18280102 2R - 18279350 18279458 3'utr sbb FlyBase G24688.2 ATTGTTTAACTAAATGATTAAATTATGCAAGTAGAACGTACAAGATTAGCATTTAGCGTGTGTATTAATTATCCTTATCTGTGTTGCGGATGGAGCTGCGCGGGATTTG 233 18279381 0.984492968 21 165 1912 0.701886792 1.667452953 0.230188679 0.124463519 0.230188679 233 76 3 186 2R:18279350-18279458 6 sbb FBtr0301551|FBtr0301547|FBtr0301550|FBtr0329997 18279063|18278978|18278196|18279063 18280102|18280102|18280102|18280048 TGTGTT 6mer3-8 dme-miR-317-3p 2R - 18279301 18279393 3'utr sbb FlyBase G18678.1 TAATTATCCTTATCTGTGTTGCGGATGGAGCTGCGCGGGATTTGCATCTAAAAGACAAATTGGGCGCGCCGCCCATTCAATTCTTATAAATAT 220 18279381 0.885389879 16 135 1533 0.630813953 1.222516382 0.296511628 0.404545455 0.619186047 220 115 12 217 2R:18279301-18279393 6 211.5 1168 FBgn0010575 986.7266667 17.07666667 26.24333333 0.214345074 12.3853211 8.059189635 2 2 2 0.15 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 18409811 18409817 - 2R_18409811_18409817_- 0.82334954 0.823319807 0.823334674 2.10E-05 imd FBtr0086725|FBtr0345891 18409794|18409794 18410171|18410171 2R - 18409801 18409830 3'utr imd FlyBase G24719.1 TTATACAAATAGAAGCTTTATTGTTACGTA 5 18409821 0.854286714 2 5 41 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2R:18409801-18409830 7 imd FBtr0086725|FBtr0345891 18409794|18409794 18410171|18410171 AGCTTTA 7mer-A1 dme-miR-79-3p 2R - 18409804 18409861 3'utr imd FlyBase G18701.1 GAGCTGGTATTTAAAAGCATTTTTGTAAAGTTTATACAAATAGAAGCTTTATTGTTAC 9 18409813 0.98230543 6 8 67 1 1.176091259 0.6 0.333333333 0.6 9 0 0 15 2R:18409804-18409861 7 6 1169 FBgn0013983 396 36.13 55.28 0.015151515 0.16606698 0.10853835 4 -4 0 0.15 dme-miR-277-3p 6mer3-8 TGCATT 2R 18409929 18409934 - 2R_18409929_18409934_- 0.981708008 0.689742276 0.835725142 0.206450926 imd FBtr0086725|FBtr0345891 18409794|18409794 18410171|18410171 2R - 18409884 18409994 3'utr imd FlyBase G24720.1 ACGGGATATATGTGCAATATTTGATTTATAAATCCAACCTATCGAATAAGTGCGTAGAATTGCATTAACTGTTATTACTGCAGTTTAATCTTTAAGTTGTGATACTTGTGT 27 18409930 0.772176735 13 24 239 0.914285714 1.505149978 0.457142857 0.148148148 0.342857143 27 3 0 32 2R:18409884-18409994 6 imd FBtr0086725|FBtr0345891 18409794|18409794 18410171|18410171 TGCATT 6mer3-8 dme-miR-277-3p 2R - 18409885 18409993 3'utr imd FlyBase G18702.1 CGGGATATATGTGCAATATTTGATTTATAAATCCAACCTATCGAATAAGTGCGTAGAATTGCATTAACTGTTATTACTGCAGTTTAATCTTTAAGTTGTGATACTTGTG 33 18409931 0.793735591 12 26 274 0.790697674 0.929418926 0.23255814 0.272727273 0.441860465 33 6 3 34 2R:18409885-18409993 6 10 1170 FBgn0013983 396 36.13 55.28 0.025252525 0.276778301 0.18089725 -4 -3 -3.5 0.15 dme-miR-92b-3p 8mer-A1 GTGCAATA 2R 18409976 18409983 - 2R_18409976_18409983_- 0.611104474 0.613092366 0.61209842 0.001405658 imd FBtr0086725|FBtr0345891 18409794|18409794 18410171|18410171 2R - 18409884 18409994 3'utr imd FlyBase G24720.1 ACGGGATATATGTGCAATATTTGATTTATAAATCCAACCTATCGAATAAGTGCGTAGAATTGCATTAACTGTTATTACTGCAGTTTAATCTTTAAGTTGTGATACTTGTGT 27 18409984 0.772176735 13 24 239 0.914285714 1.505149978 0.457142857 0.148148148 0.342857143 27 3 0 32 2R:18409884-18409994 8 imd FBtr0086725|FBtr0345891 18409794|18409794 18410171|18410171 GTGCAATA 8mer-A1 dme-miR-92b-3p 2R - 18409885 18409993 3'utr imd FlyBase G18702.1 CGGGATATATGTGCAATATTTGATTTATAAATCCAACCTATCGAATAAGTGCGTAGAATTGCATTAACTGTTATTACTGCAGTTTAATCTTTAAGTTGTGATACTTGTG 33 18409984 0.793735591 12 26 274 0.790697674 0.929418926 0.23255814 0.272727273 0.441860465 33 6 3 34 2R:18409885-18409993 8 9 1171 FBgn0013983 396 36.13 55.28 0.022727273 0.249100471 0.162807525 1 1 1 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 18419784 18419791 + 2R_18419784_18419791_+ 0.624093865 0.624148765 0.624121315 3.88E-05 Dp1 FBtr0345226|FBtr0086682|FBtr0086679|FBtr0086680|FBtr0086681|FBtr0086683|FBtr0340329 18419424|18419424|18419424|18419424|18419424|18419424|18419424 18420742|18420742|18420742|18420742|18420742|18421124|18420742 2R + 18419761 18419817 3'utr Dp1 FlyBase G17185.1 ACACATGCTCACACATATGAAATTGCATTTATACAACATATAGAATACGAGAATCGA 84 18419783 0.807586703 7 77 648 0.914893617 1.33243846 0.031914894 0.107142857 0.20212766 84 5 3 86 2R:18419761-18419817 8 Dp1 FBtr0086683|FBtr0340329|FBtr0086680|FBtr0086681|FBtr0086682|FBtr0086679|FBtr0345226 18419424|18419424|18419424|18419424|18419424|18419424|18419424 18421124|18420742|18420742|18420742|18420742|18420742|18420742 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 18419762 18419805 3'utr Dp1 FlyBase G13102.1 CACATGCTCACACATATGAAATTGCATTTATACAACATATAGAA 41 18419783 0.964412269 4 39 282 0.938461538 1.785329835 0.123076923 0.390243902 0.615384615 41 4 0 61 2R:18419762-18419805 8 60.5 1172 FBgn0027835 9328.583333 204.7766667 314.1966667 0.006485443 0.295443817 0.192554557 1 1 1 0.15 dme-miR-1012-3p 6mer2-7 TGACTA 2R 18420019 18420024 + 2R_18420019_18420024_+ 0.999999969 1 0.999999985 0 Dp1 FBtr0345226|FBtr0086682|FBtr0086679|FBtr0086680|FBtr0086681|FBtr0086683|FBtr0340329 18419424|18419424|18419424|18419424|18419424|18419424|18419424 18420742|18420742|18420742|18420742|18420742|18421124|18420742 2R + 18419965 18420037 3'utr Dp1 FlyBase G17186.1 TCCCTAAAAGTAAGCAGAAAGTTCAGCAAAATGGTTTGTTAATTGAATTAAAACTGACTAGCGAAGCACGTTC 14 18420011 0.970726222 6 11 63 0.8125 1.113943352 0.5 0.142857143 0.25 14 3 0 13 2R:18419965-18420037 6 Dp1 FBtr0086683|FBtr0340329|FBtr0086680|FBtr0086681|FBtr0086682|FBtr0086679|FBtr0345226 18419424|18419424|18419424|18419424|18419424|18419424|18419424 18421124|18420742|18420742|18420742|18420742|18420742|18420742 TGACTA 6mer2-7 dme-miR-1012-3p 2R + 18419977 18420060 3'utr Dp1 FlyBase G13104.1 AGCAGAAAGTTCAGCAAAATGGTTTGTTAATTGAATTAAAACTGACTAGCGAAGCACGTTCAAGAACGAATGTAATTTTAAGCA 21 18420012 0.841890371 8 15 119 0.807692308 1.021189299 0.269230769 0.19047619 0.346153846 21 4 1 21 2R:18419977-18420060 6 10.5 1173 FBgn0027835 9328.583333 204.7766667 314.1966667 0.001125573 0.051275373 0.03341856 8 7 7.5 0.15 dme-miR-2a-2-5p 6mer3-8 TGATGA 2R 18420166 18420171 + 2R_18420166_18420171_+ 0.999999998 0.950464339 0.975232169 0.035027029 Dp1 FBtr0345226|FBtr0086682|FBtr0086679|FBtr0086680|FBtr0086681|FBtr0086683|FBtr0340329 18419424|18419424|18419424|18419424|18419424|18419424|18419424 18420742|18420742|18420742|18420742|18420742|18421124|18420742 2R + 18420149 18420231 3'utr Dp1 FlyBase G17188.1 AACCCTTCCCAATTAAGTGATGATTATTATGATTTATGCGAAAGTAAATGTTAAATGAACGTTGATTGTATTGTACAAACGTT 14 18420162 0.985921137 9 14 119 1 1.176091259 0.133333333 0.071428571 0.133333333 14 0 0 15 2R:18420149-18420231 6 Dp1 FBtr0086683|FBtr0340329|FBtr0086680|FBtr0086681|FBtr0086682|FBtr0086679|FBtr0345226 18419424|18419424|18419424|18419424|18419424|18419424|18419424 18421124|18420742|18420742|18420742|18420742|18420742|18420742 TGATGA 6mer3-8 dme-miR-2a-2-5p 2R + 18420149 18420184 3'utr Dp1 FlyBase G13105.1 AACCCTTCCCAATTAAGTGATGATTATTATGATTTA 4 18420166 0.987765367 2 3 23 1 0.602059991 0 0.333333333 0.5 3 0 0 4 2R:18420149-18420184 6 5 1174 FBgn0027835 9328.583333 204.7766667 314.1966667 0.000535987 0.024416844 0.0159136 4 0 2 0.15 dme-miR-276a-3p 6mer3-8 AGTTCC 2R 18425970 18425975 + 2R_18425970_18425975_+ 0.98597256 0.962833107 0.974402834 0.016362097 CG5174 FBtr0306637|FBtr0340359|FBtr0086687|FBtr0086686|FBtr0306636|FBtr0301149|FBtr0086690 18425446|18425446|18425446|18425446|18425446|18425446|18425446 18426221|18426221|18426221|18426221|18426221|18426221|18426221 2R + 18425897 18426001 3'utr CG5174 FlyBase G17201.1 ATTAGAAAATCATGCATTGCGGTTAAAGTGAATATACATTTGTTTTACGCTTTTATTTCTTCTCTAGGCGTTGAGTTCCGTGGTTAGATGGCGTTCCCTAATCCG 15 18425977 0.803246165 9 14 126 1 1.278753601 0.263157895 0.133333333 0.315789474 15 0 0 19 2R:18425897-18426001 6 CG5174 FBtr0301149|FBtr0086690|FBtr0306636|FBtr0086686|FBtr0340359|FBtr0086687|FBtr0306637 18425446|18425446|18425446|18425446|18425446|18425446|18425446 18426221|18426221|18426221|18426221|18426221|18426221|18426221 AGTTCC 6mer3-8 dme-miR-276a-3p 2R + 18425934 18426043 3'utr CG5174 FlyBase G13119.1 ATTTGTTTTACGCTTTTATTTCTTCTCTAGGCGTTGAGTTCCGTGGTTAGATGGCGTTCCCTAATCCGTTGAAAAGCCAATTCCAAATTTATTTAGTACTAAATATTTGT 15 18425979 0.987409418 11 14 136 0.961538462 1.096910013 0.192307692 0.6 0.769230769 15 0 1 25 2R:18425934-18426043 6 5 1175 FBgn0034345 1826.563333 198.1366667 302.45 0.002737381 0.025235107 0.016531658 -7 -9 -8 0.15 dme-miR-14-3p 6mer3-8 AAGACT 2R 18445480 18445485 + 2R_18445480_18445485_+ 0.999927181 0.772645904 0.886286543 0.160712148 slim FBtr0086693 18444783 18445526 2R + 18445461 18445497 3'utr slim FlyBase G17220.1 TGCTCGGTTTACATTACCCAAGACTAAATTTGGTTGA 9 18445475 0.728883053 4 8 61 0.888888889 0.903089987 0.333333333 0 0 9 1 0 8 2R:18445461-18445497 6 slim FBtr0086693 18444783 18445526 AAGACT 6mer3-8 dme-miR-14-3p 2R + 18445433 18445492 3'utr slim FlyBase G13131.1 CTGCTCGCCCCCGTGGCGAACGTTGGTTTGCTCGGTTTACATTACCCAAGACTAAATTTG 7 18445475 0.980120861 5 7 51 1 1.041392685 0.454545455 0.285714286 0.545454545 7 0 0 11 2R:18445433-18445492 6 6.5 1176 FBgn0261477 905.8466667 35.99333333 55.57333333 0.007175607 0.180588998 0.116962572 5 5 5 0.15 dme-miR-1003-3p 6mer3-8 ATGTGA 2R 18620532 18620537 - 2R_18620532_18620537_- 0.99999951 0.889661243 0.944830376 0.07802096 Atg7 FBtr0086712|FBtr0086711 18620464|18620464 18620720|18620720 2R - 18620503 18620636 3'utr Atg7 FlyBase G24755.1 AGCATTTATAGTTCAATGTCTATACCAAAAATGTGTGTACTTCAATGCTTTTATTCTATCTAGTCGTTAAGCAAATTGTGAATCATTCAAATGAAATTGATGTGAAAATTAGGCATAAGAAAAATGTGAATTTA 39 18620528 0.981159422 11 37 268 0.957446809 1.352182518 0.170212766 0.179487179 0.319148936 39 1 1 45 2R:18620503-18620636 6 Atg7 FBtr0086712|FBtr0086711 18620464|18620464 18620720|18620720 ATGTGA 6mer3-8 dme-miR-1003-3p 2R - 18620503 18620622 3'utr Atg7 FlyBase G18724.1 AATGTCTATACCAAAAATGTGTGTACTTCAATGCTTTTATTCTATCTAGTCGTTAAGCAAATTGTGAATCATTCAAATGAAATTGATGTGAAAATTAGGCATAAGAAAAATGTGAATTTA 26 18620561 0.985100189 12 24 192 0.976744186 1.62324929 0.255813953 0.423076923 0.651162791 26 1 0 42 2R:18620503-18620622 6 10 1177 FBgn0034366 131 6.586666667 10.04 0.076335878 1.518218623 0.996015936 -9 24 7.5 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 2R 18632585 18632591 - 2R_18632585_18632591_- 0.773560551 0.770299699 0.771930125 0.002305805 CG30122 FBtr0086660|FBtr0300924|FBtr0300923 18632326|18632326|18632326 18632821|18632821|18632821 2R - 18632567 18632658 3'utr CG30122 FlyBase G24773.1 AAACCAAACAATTGCGAGGGCTAACCAAACCCTAAGTCAAAATTCTTACCTTACCTTCGGATGGATTGTACAAAACTAAGACTACATATATC 51 18632593 0.937656251 11 47 300 0.911764706 1.491361694 0.088235294 0.254901961 0.441176471 51 5 1 62 2R:18632567-18632658 7 CG30122 FBtr0300923|FBtr0300924|FBtr0086660 18632326|18632326|18632326 18632821|18632821|18632821 GTACAAA 7mer-A1 dme-miR-305-5p 2R - 18632538 18632620 3'utr CG30122 FlyBase G18736.1 AAAATTCTTACCTTACCTTCGGATGGATTGTACAAAACTAAGACTACATATATCATTTGAAATTGAACGTGAATGTTTCGCTT 34 18632593 0.972391331 10 31 222 0.94 1.371067862 0.04 0.352941176 0.56 34 2 1 47 2R:18632538-18632620 7 33 1178 FBgn0050122 2646.33 69.24 106.41 0.0124701 0.47660312 0.310121229 2 2 2 0.15 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 2R 18641381 18641386 - 2R_18641381_18641386_- 0.780509461 0.422450854 0.601480157 0.253185664 SP2637 FBtr0301861|FBtr0301862 18640860|18640860 18641446|18641446 2R - 18641324 18641414 5'utr SP2637 FlyBase G24798.1 CGAAAATGTCGCAGATGTGTTAATTGACTGGTGCATGTGTTAATTGTCGCTGTCCACCGCAAATGCTTCTGCTTGCCTTTTGTTTAAGTTT 18 18641390 0.687561821 10 16 170 0.857142857 0.77815125 0.238095238 0.166666667 0.285714286 18 1 2 18 2R:18641324-18641414 6 SP2637 FBtr0301861|FBtr0301862 18640860|18640860 18641446|18641446 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 2R - 18641330 18641405 5'utr SP2637 FlyBase G18754.1 CGCAGATGTGTTAATTGACTGGTGCATGTGTTAATTGTCGCTGTCCACCGCAAATGCTTCTGCTTGCCTTTTGTTT 16 18641371 0.621200146 10 13 120 0.88 1.342422681 0.12 0.3125 0.56 16 3 0 22 2R:18641330-18641405 6 9.5 1179 FBgn0034371 900.1366667 60.64 93.18 0.010553953 0.156662269 0.101953209 4 -15 -5.5 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 18658818 18658824 - 2R_18658818_18658824_- 0.606711553 0.626614553 0.616663053 0.014073546 CG42306 FBtr0299689|FBtr0299688|FBtr0340393 18658416|18658416|18658416 18660044|18660044|18660044 2R - 18658731 18658845 5'utr CG42306 FlyBase G24809.1 TGTGTACGAAAAAATATCCGATGTGTTCGAGTTTGTCCAATCTTGCCTGGCGGACGAAAGCCTGGATTTTAGCTTGGTGTCCAACAGCGATGGCAAACTGGGCGATGAGGACTTG 22 18658824 0.980418377 8 21 151 0.96 1.380211242 0.04 0.136363636 0.24 22 1 0 24 2R:18658731-18658845 7 CG42306 FBtr0340393|FBtr0299688|FBtr0299689 18658416|18658416|18658416 18660044|18660044|18660044 TGTGTTC 7mer-m8 dme-miR-317-3p 2R - 18658788 18658835 5'utr CG42306 FlyBase G18764.1 AAAATATCCGATGTGTTCGAGTTTGTCCAATCTTGCCTGGCGGACGAA 5 18658824 0.974173228 2 4 27 1 0.84509804 0 0.2 0.428571429 5 0 0 7 2R:18658788-18658835 7 7.5 1180 FBgn0259202 627.1666667 39.15666667 59.96 0.011958544 0.191538265 0.125083389 0 0 0 0.15 dme-miR-965-3p 7mer-m8 TACGCTT 2R 18658958 18658964 - 2R_18658958_18658964_- 0.620204233 0.620204524 0.620204379 2.12E-07 CG42306 FBtr0299689|FBtr0299688|FBtr0340393 18658416|18658416|18658416 18660044|18660044|18660044 2R - 18658921 18659000 5'utr CG42306 FlyBase G24810.1 GAACGCGAGGAGCAGCGCAATTTGCGCATGTATCGATACGCTTTAGTCAGGGTTAAATTTCCCAATGGACTCTTTATACA 88 18658964 0.985590529 12 82 683 0.951923077 1.393575203 0.240384615 0.159090909 0.288461538 88 2 3 99 2R:18658921-18659000 7 CG42306 FBtr0340393|FBtr0299688|FBtr0299689 18658416|18658416|18658416 18660044|18660044|18660044 TACGCTT 7mer-m8 dme-miR-965-3p 2R - 18658922 18658998 5'utr CG42306 FlyBase G18765.1 ACGCGAGGAGCAGCGCAATTTGCGCATGTATCGATACGCTTTAGTCAGGGTTAAATTTCCCAATGGACTCTTTATAC 52 18658964 0.983447231 7 51 398 1 1.875061263 0.306666667 0.288461538 0.506666667 52 0 0 75 2R:18658922-18658998 7 56 1181 FBgn0259202 627.1666667 39.15666667 59.96 0.08929046 1.430152379 0.933955971 0 0 0 0.15 dme-miR-276a-3p 6mer3-8 AGTTCC 2R 18659853 18659858 - 2R_18659853_18659858_- 0.953028156 0.9871728 0.970100478 0.024143878 CG42306 FBtr0299689|FBtr0299688|FBtr0340393 18658416|18658416|18658416 18660044|18660044|18660044 2R - 18659843 18659918 5'utr CG42306 FlyBase G24814.1 GGCAGCGGCATGGGCACTGGCCACAAGCTGAATTCCCCCAAACAGGAGACTCCTTCAAGTAGTTCCCGCCAAAAGT 13 18659856 0.880017291 5 13 48 1 1.113943352 0.153846154 0 0 13 0 0 13 2R:18659843-18659918 6 CG42306 FBtr0340393|FBtr0299688|FBtr0299689 18658416|18658416|18658416 18660044|18660044|18660044 AGTTCC 6mer3-8 dme-miR-276a-3p 2R - 18659843 18659876 5'utr CG42306 FlyBase G18768.1 CAGGAGACTCCTTCAAGTAGTTCCCGCCAAAAGT 13 18659856 0.740489111 2 12 52 1 1.230448921 0.235294118 0.307692308 0.470588235 13 0 0 17 2R:18659843-18659876 6 9 1182 FBgn0259202 627.1666667 39.15666667 59.96 0.014350252 0.229845918 0.150100067 -2 -2 -2 0.15 dme-miR-33-5p 6mer3-8 CAATGC 2R 18667587 18667592 - 2R_18667587_18667592_- 0.998576547 0.998804037 0.998690292 0.000160867 edl FBtr0086652 18667525 18667828 2R - 18667541 18667664 3'utr edl FlyBase G24818.1 AGATTGCTTCAAGTTTTCAATTCATTTTGAAAGAAAAGTGATTGGAGTGAATAGAATAAAAGATTGAAGTTACAATGCTGTCCTATTAGTTAACTAAGTTCGCATATGATGAAAATATAAAATG 1064 18667589 0.878959278 27 1022 10526 0.958064516 2.171726454 0.253225806 0.142857143 0.264516129 1064 45 7 1188 2R:18667541-18667664 6 edl FBtr0086652 18667525 18667828 CAATGC 6mer3-8 dme-miR-33-5p 2R - 18667527 18667654 3'utr edl FlyBase G18770.1 AAGTTTTCAATTCATTTTGAAAGAAAAGTGATTGGAGTGAATAGAATAAAAGATTGAAGTTACAATGCTGTCCTATTAGTTAACTAAGTTCGCATATGATGAAAATATAAAATGAAATTTTATAACTG 653 18667589 0.989705681 25 614 6020 0.94438723 2.184218085 0.270854789 0.370597243 0.576725026 653 49 5 917 2R:18667527-18667654 6 693.5 1183 FBgn0023214 335.02 28.75666667 44.53 2.07002567 24.11614698 15.57377049 -3 -3 -3 0.15 dme-miR-8-3p 7mer-A1 AGTATTA 2R 18667696 18667702 - 2R_18667696_18667702_- 0.822728282 0.818410078 0.82056918 0.003053429 edl FBtr0086652 18667525 18667828 2R - 18667676 18667753 3'utr edl FlyBase G24819.1 TCTAGTTATGCTAGCTTATAATGCCTAGTCCTTAGTTCTGCTCGTCATTTAAGTATTAGCGATAATATTCTGCATTTC 42 18667699 0.815674908 17 39 392 0.9375 1.176091259 0.083333333 0.095238095 0.208333333 42 1 2 45 2R:18667676-18667753 7 edl FBtr0086652 18667525 18667828 AGTATTA 7mer-A1 dme-miR-8-3p 2R - 18667680 18667746 3'utr edl FlyBase G18771.1 ATGCTAGCTTATAATGCCTAGTCCTTAGTTCTGCTCGTCATTTAAGTATTAGCGATAATATTCTGCA 29 18667721 0.732285855 12 29 243 1 1.633468456 0.11627907 0.379310345 0.581395349 29 0 0 43 2R:18667680-18667746 7 19.5 1184 FBgn0023214 335.02 28.75666667 44.53 0.05820548 0.678103628 0.437907029 -3 19 8 0.15 dme-miR-307a-3p 6mer3-8 GGTTGT 2R 18667783 18667788 - 2R_18667783_18667788_- 0.985188934 0.989673735 0.987431334 0.003171232 edl FBtr0086652 18667525 18667828 2R - 18667766 18667902 stop_codon edl FlyBase G24820.1 TTCCCGTGGGCGGCAAGATGCTCTACCGCGACTTCCGGGTGCGACTCGCCCGAGCAATGGCCCTGCTATCATAGGGATTACCCATATATCTCACGGATACCCAGTCCTCTCTATGGTTGTACATATCTCTAGGATTC 300 18667789 0.82265435 27 270 2591 0.902506964 1.095571662 0.114206128 0.163333333 0.300835655 300 10 25 324 2R:18667766-18667902 6 edl FBtr0086652 18667525 18667828 GGTTGT 6mer3-8 dme-miR-307a-3p 2R - 18667765 18667902 stop_codon edl FlyBase G18772.1 TTCCCGTGGGCGGCAAGATGCTCTACCGCGACTTCCGGGTGCGACTCGCCCGAGCAATGGCCCTGCTATCATAGGGATTACCCATATATCTCACGGATACCCAGTCCTCTCTATGGTTGTACATATCTCTAGGATTCG 209 18667789 0.922196601 20 181 1682 0.858044164 0.94320721 0.19873817 0.365384615 0.583596215 208 15 30 272 2R:18667765-18667902 6 192.5 1185 FBgn0023214 335.02 28.75666667 44.53 0.574592562 6.694099919 4.322928363 1 1 1 0.15 dme-miR-1008-3p 8mer-A1 AGCTGTGA 2R 18704858 18704865 + 2R_18704858_18704865_+ 0.491395459 0.442538959 0.466967209 0.034546762 Sik3 FBtr0340388|FBtr0344259|FBtr0304025|FBtr0344258|FBtr0304026 18704794|18704794|18704794|18704794|18704794 18705805|18705805|18705805|18705805|18705805 2R + 18704800 18704916 3'utr Sik3 FlyBase G17294.1 TGGAATCCCGCCCTGCTAGCTACCCAAAATGACTACTCGCCTTGCCTAAACTCTGCGTAGCTGTGATTAAAGTCGATATGTACGATATAGCCATCCTAAACCAGTAGCAATTGGACA 73 18704857 0.984407599 15 66 516 0.895348837 1.284430734 0.290697674 0.109589041 0.244186047 73 6 3 77 2R:18704800-18704916 8 Sik3 FBtr0304026|FBtr0340388|FBtr0344259|FBtr0304025|FBtr0344258 18704794|18704794|18704794|18704794|18704794 18705805|18705805|18705805|18705805|18705805 AGCTGTGA 8mer-A1 dme-miR-1008-3p 2R + 18704825 18704920 3'utr Sik3 FlyBase G13180.1 AAAATGACTACTCGCCTTGCCTAAACTCTGCGTAGCTGTGATTAAAGTCGATATGTACGATATAGCCATCCTAAACCAGTAGCAATTGGACAGGAG 49 18704857 0.98051844 13 45 320 0.958333333 1.361727836 0.222222222 0.306122449 0.527777778 49 1 2 69 2R:18704825-18704920 8 45 1186 FBgn0262103 424.8866667 8.64 13.18 0.105910596 5.208333333 3.414264036 1 1 1 0.15 dme-miR-308-3p 8mer-m1 CTGTGATT 2R 18705649 18705656 + 2R_18705649_18705656_+ 0.382914002 0.382476473 0.382695237 0.000309359 Sik3 FBtr0340388|FBtr0344259|FBtr0304025|FBtr0344258|FBtr0304026 18704794|18704794|18704794|18704794|18704794 18705805|18705805|18705805|18705805|18705805 2R + 18705602 18705701 3'utr Sik3 FlyBase G17298.1 ACGGATTAAACACAACATTGATAAATCTATTTTTTAATGAAAGACTGCTGTGATTTTACATGTAATTAATTTAGAGCGAAAGAAGGTAGGAGTAAATAAC 277 18705647 0.987338983 20 271 2392 0.973988439 2.527629901 0.046242775 0.198555957 0.358381503 277 9 0 337 2R:18705602-18705701 8 Sik3 FBtr0304026|FBtr0340388|FBtr0344259|FBtr0304025|FBtr0344258 18704794|18704794|18704794|18704794|18704794 18705805|18705805|18705805|18705805|18705805 CTGTGATT 8mer-m1 dme-miR-308-3p 2R + 18705620 18705693 3'utr Sik3 FlyBase G13186.1 TGATAAATCTATTTTTTAATGAAAGACTGCTGTGATTTTACATGTAATTAATTTAGAGCGAAAGAAGGTAGGAG 262 18705647 0.987533432 15 259 2301 0.984415584 2.57863921 0.051948052 0.351145038 0.558441558 262 6 0 379 2R:18705620-18705693 8 261.5 1187 FBgn0262103 424.8866667 8.64 13.18 0.61545824 30.2662037 19.84066768 2 2 2 0.15 dme-miR-276a-3p 6mer3-8 AGTTCC 2R 18773994 18773999 + 2R_18773994_18773999_+ 0.949650211 0.943988495 0.946819353 0.004003426 Mctp FBtr0346955|FBtr0330004|FBtr0110970|FBtr0345950|FBtr0330005|FBtr0110971 18773742|18773952|18773742|18773742|18773742|18773742 18774667|18774667|18774667|18774824|18774667|18774667 2R + 18773862 18774077 3'utr Mctp FlyBase G17316.1 TGATGCAGCGCTTCCGGGCCAACACCAGCCAGTTGAAGCACAAGTTTGGCCAGGCCAAGAGCCTCAGTCTGAGCCATAGCGAATTCAATTAGACACCAAAGTTAGTTAGCTAGTTAAGAATCGAAGTCAACCAGTTCCACCCATAGAAGGAAACAACACACGCAATTCACCTTGACTCAATTATGCAGCACAAAATTGCTTTACTTATTTTAATAT 246 18773996 0.905648492 25 236 1143 0.939799331 1.971585065 0.193979933 0.174796748 0.321070234 246 16 2 281 2R:18773862-18774077 6 Mctp FBtr0330005|FBtr0110971|FBtr0346955|FBtr0330004|FBtr0110970|FBtr0345950 18773742|18773742|18773742|18773952|18773742|18773742 18774667|18774667|18774667|18774667|18774667|18774824 AGTTCC 6mer3-8 dme-miR-276a-3p 2R + 18773842 18774020 3'utr Mctp FlyBase G13200.1 CGGCGGAAGGCAGCAGCAGTTGATGCAGCGCTTCCGGGCCAACACCAGCCAGTTGAAGCACAAGTTTGGCCAGGCCAAGAGCCTCAGTCTGAGCCATAGCGAATTCAATTAGACACCAAAGTTAGTTAGCTAGTTAAGAATCGAAGTCAACCAGTTCCACCCATAGAAGGAAACAACAC 102 18773996 0.965449706 15 90 427 0.918367347 2.130333768 0.197278912 0.396039604 0.585034014 101 12 0 135 2R:18773842-18774020 6 75.5 1188 FBgn0034389 335.3666667 10.34333333 15.83333333 0.225126727 7.299387689 4.768421053 -2 -2 -2 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2R 18774214 18774219 + 2R_18774214_18774219_+ 0.892078967 0.947218909 0.919648938 0.038989797 Mctp FBtr0346955|FBtr0330004|FBtr0110970|FBtr0345950|FBtr0330005|FBtr0110971 18773742|18773952|18773742|18773742|18773742|18773742 18774667|18774667|18774667|18774824|18774667|18774667 2R + 18774152 18774265 3'utr Mctp FlyBase G17317.2 AAGCGATTATGTACATACACAATGATAGCGGATATAAATAGGAATCTATTGAAACATTGCATGTACCTAAGGTAACCTCTCTCAAAGATCTATTCGAATATTTACCAAAACTCA 124 18774213 0.777117406 18 117 790 0.954248366 1.687231601 0.117647059 0.185483871 0.339869281 124 5 2 146 2R:18774152-18774265 6 Mctp FBtr0330005|FBtr0110971|FBtr0346955|FBtr0330004|FBtr0110970|FBtr0345950 18773742|18773742|18773742|18773952|18773742|18773742 18774667|18774667|18774667|18774667|18774667|18774824 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2R + 18774187 18774250 3'utr Mctp FlyBase G13202.2 AAATAGGAATCTATTGAAACATTGCATGTACCTAAGGTAACCTCTCTCAAAGATCTATTCGAAT 63 18774213 0.776665747 10 61 381 0.958762887 1.968482949 0.072164948 0.428571429 0.628865979 63 4 0 93 2R:18774187-18774250 6 72 1189 FBgn0034389 335.3666667 10.34333333 15.83333333 0.214690389 6.961005479 4.547368421 1 1 1 0.15 dme-miR-283-5p 8mer-m1 TGATATTT 2R 18774338 18774345 + 2R_18774338_18774345_+ 0.460455686 0.409244818 0.434850252 0.036211575 Mctp FBtr0346955|FBtr0330004|FBtr0110970|FBtr0345950|FBtr0330005|FBtr0110971 18773742|18773952|18773742|18773742|18773742|18773742 18774667|18774667|18774667|18774824|18774667|18774667 2R + 18774280 18774507 3'utr Mctp FlyBase G17318.1 AGATTCCTTTTTGCGCGAATCCAAATGCGATTAATTATTTATTGTGTATTTCAATTTGTGATATTTTCAAAGAATTTTGCAACTAGGCTTACTACTTAATGTGACTTAAACCACGGAAGCTCCGTACCGCACAGAAGTTTCCCCCAAACTCCATTTACAATTTACCACTCGATTGCACTCGACTCGTTTAAGGACGCTTTTTCATTATATACCTTTACATATATACCT 159 18774334 0.92636924 40 153 1654 0.970149254 2.290034611 0.114427861 0.194968553 0.36318408 159 6 0 195 2R:18774280-18774507 8 Mctp FBtr0330005|FBtr0110971|FBtr0346955|FBtr0330004|FBtr0110970|FBtr0345950 18773742|18773742|18773742|18773952|18773742|18773742 18774667|18774667|18774667|18774667|18774667|18774824 TGATATTT 8mer-m1 dme-miR-283-5p 2R + 18774316 18774405 3'utr Mctp FlyBase G13204.1 ATTTATTGTGTATTTCAATTTGTGATATTTTCAAAGAATTTTGCAACTAGGCTTACTACTTAATGTGACTTAAACCACGGAAGCTCCGTA 108 18774334 0.764711591 14 99 1191 0.915584416 1.848189117 0.168831169 0.342592593 0.538961039 108 12 1 141 2R:18774316-18774405 8 87.5 1190 FBgn0034389 335.3666667 10.34333333 15.83333333 0.260908458 8.459555269 5.526315789 4 4 4 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2R 18794753 18794758 - 2R_18794753_18794758_- 0.999492173 0.999389453 0.999440813 7.26E-05 MFS15 FBtr0086636|FBtr0086637 18794616|18794616 18794808|18794808 2R - 18794690 18794794 3'utr MFS15 FlyBase G24838.1 CGTGGCCTAAGGATTGGTTGTAGATGTGAAACATTTGTACCTTGAAGGCGAAGCATTCCTTGGAATTGATGAATCGCAATTAGTATCGTATTACTAGTTATACAC 155 18794759 0.843930028 15 151 1016 0.978142077 2.252853031 0.398907104 0.15483871 0.284153005 155 4 0 179 2R:18794690-18794794 6 MFS15 FBtr0086637|FBtr0086636 18794616|18794616 18794808|18794808 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2R - 18794689 18794791 3'utr MFS15 FlyBase G18790.1 GGCCTAAGGATTGGTTGTAGATGTGAAACATTTGTACCTTGAAGGCGAAGCATTCCTTGGAATTGATGAATCGCAATTAGTATCGTATTACTAGTTATACACG 104 18794759 0.977631924 14 101 669 0.972222222 2.146128036 0.381944444 0.317307692 0.506944444 104 4 0 140 2R:18794689-18794791 6 114.5 1191 FBgn0034392 393.6666667 26.16666667 39.91 0.290855207 4.375796178 2.868955149 1 1 1 0.15 dme-miR-11-3p 7mer-m1 TGTGATG 2R 18797094 18797100 - 2R_18797094_18797100_- 0.405290551 0.402359438 0.403824995 0.002072671 l(2)08717 FBtr0345426 18796973 18797478 2R - 18797070 18797124 3'utr l(2)08717 FlyBase G24849.1 TTAAGTTAGGCATTAGCGAAAACTTGTGATGAAAAAAGTAAACTAAAAAAGGCAA 467 18797101 0.808376542 6 422 2218 0.912162162 1.119609903 0.089527027 0.207708779 0.375 467 12 40 540 2R:18797070-18797124 7 l(2)08717 FBtr0345426 18796973 18797478 TGTGATG 7mer-m1 dme-miR-11-3p 2R - 18797069 18797122 3'utr l(2)08717 FlyBase G18796.1 AAGTTAGGCATTAGCGAAAACTTGTGATGAAAAAAGTAAACTAAAAAAGGCAAA 334 18797101 0.801552329 5 297 1513 0.902083333 1.117973956 0.070833333 0.317365269 0.525 334 15 32 433 2R:18797069-18797122 7 397 1192 FBgn0010651 461.1766667 23.46 35.57 0.860841471 16.92242114 11.16109081 1 1 1 0.15 dme-miR-252-5p 6mer3-8 GTACTT 2R 18821341 18821346 + 2R_18821341_18821346_+ 0.99985588 0.999990736 0.999923308 9.53E-05 Phb2 FBtr0086616|FBtr0086615|FBtr0086614|FBtr0112863 18821290|18821290|18821290|18821290 18821839|18821839|18821839|18821839 2R + 18821308 18821358 3'utr Phb2 FlyBase G17331.1 CAAAAAGAGTTTACTTTTAAGTTGAAAACACTTGTACTTTTGGTTTCAATC 20 18821340 0.98698034 5 20 181 1 1.380211242 0.166666667 0.2 0.333333333 20 0 0 24 2R:18821308-18821358 6 Phb2 FBtr0086615|FBtr0086614|FBtr0112863|FBtr0086616 18821290|18821290|18821290|18821290 18821839|18821839|18821839|18821839 GTACTT 6mer3-8 dme-miR-252-5p 2R + 18821326 18821393 3'utr Phb2 FlyBase G13214.1 AAGTTGAAAACACTTGTACTTTTGGTTTCAATCACATTGGCCAAAACTTAGACATAGCCTTCATAATT 22 18821340 0.854977068 9 22 164 1 1.531478917 0.294117647 0.454545455 0.647058824 22 0 0 34 2R:18821326-18821393 6 17.5 1193 FBgn0010551 1156.073333 96.49666667 146.7133333 0.015137448 0.181353415 0.119280229 1 1 1 0.15 dme-miR-986-5p 6mer2-7 TTCGAG 2R 18821554 18821559 + 2R_18821554_18821559_+ 0.992209132 0.999999852 0.996104492 0.005508928 Phb2 FBtr0086616|FBtr0112861|FBtr0086615|FBtr0086614|FBtr0112863 18821290|18821508|18821290|18821290|18821290 18821839|18821839|18821839|18821839|18821839 2R + 18821543 18821595 3'utr Phb2 FlyBase G17334.1 ATTGAAATTCCTTCGAGCTAGAGCCTAAGTACCGTTTAGTTTTAACCACTCCC 7 18821550 0.985069156 3 6 50 0.875 0.84509804 0.125 0.142857143 0.25 7 1 0 7 2R:18821543-18821595 6 Phb2 FBtr0086615|FBtr0086614|FBtr0112863|FBtr0086616|FBtr0112861 18821290|18821290|18821290|18821290|18821508 18821839|18821839|18821839|18821839|18821839 TTCGAG 6mer2-7 dme-miR-986-5p 2R + 18821543 18821573 3'utr Phb2 FlyBase G13215.1 ATTGAAATTCCTTCGAGCTAGAGCCTAAGTA 6 18821551 0.66355227 3 5 34 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2R:18821543-18821573 6 5 1194 FBgn0010551 1156.073333 96.49666667 146.7133333 0.004324985 0.051815261 0.034080065 4 3 3.5 0.15 dme-miR-263a-5p 6mer3-8 GTGCCA 2R 18821690 18821695 + 2R_18821690_18821695_+ 0.972128536 0.957353157 0.964740847 0.010447715 Phb2 FBtr0112861|FBtr0086615|FBtr0086614|FBtr0112863 18821508|18821290|18821290|18821290 18821839|18821839|18821839|18821839 2R + 18821677 18821710 3'utr Phb2 FlyBase G17335.1 ATCCGTTCACTGGGTGCCAAGGATTGAAACACGG 22 18821687 0.728859539 4 21 93 0.965517241 1.447158031 0.172413793 0.272727273 0.448275862 22 1 0 28 2R:18821677-18821710 6 Phb2 FBtr0086615|FBtr0086614|FBtr0112863|FBtr0112861 18821290|18821290|18821290|18821508 18821839|18821839|18821839|18821839 GTGCCA 6mer3-8 dme-miR-263a-5p 2R + 18821677 18821702 3'utr Phb2 FlyBase G13216.1 ATCCGTTCACTGGGTGCCAAGGATTG 20 18821687 0.737826102 3 17 81 0.866666667 1.414973348 0.4 0.3 0.533333333 20 4 0 26 2R:18821677-18821702 6 21 1195 FBgn0010551 1156.073333 96.49666667 146.7133333 0.018164938 0.217624098 0.143136275 3 3 3 0.15 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 18822136 18822143 + 2R_18822136_18822143_+ 0.602258321 0.605483962 0.603871142 0.002280914 Phb2 FBtr0112862 18822099 18822250 2R + 18822046 18822155 stop_codon Phb2 FlyBase G17337.1 GAAGGAGAAGAACGTGGGCAACGTGGCGAGCAGCATGGCCGAGCGGATGATGTGATCCACACCTTAGCGGGGGCTTCCTGTCAAGATCCTAGTACAAAGCGCATACAGAA 31 18822135 0.971134777 7 24 133 0.815789474 1.190331698 0.342105263 0.193548387 0.342105263 31 6 1 31 2R:18822046-18822155 8 Phb2 FBtr0112862 18822099 18822250 AGTACAAA 8mer-A1 dme-miR-305-5p 2R + 18822109 18822161 3'utr Phb2 FlyBase G13218.1 TTAGCGGGGGCTTCCTGTCAAGATCCTAGTACAAAGCGCATACAGAACAGAGC 23 18822135 0.951850554 5 15 116 0.676470588 0.884606581 0.235294118 0.347826087 0.558823529 23 9 2 23 2R:18822109-18822161 8 21.5 1196 FBgn0010551 1156.073333 96.49666667 146.7133333 0.018597436 0.222805624 0.146544281 1 1 1 0.15 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2R 18822378 18822385 - 2R_18822378_18822385_- 0.631116044 0.631121796 0.63111892 4.10E-06 CG15097 FBtr0303237|FBtr0330604|FBtr0086630|FBtr0330605 18822186|18822186|18822186|18822186 18822959|18822608|18822959|18822581 2R - 18822327 18822400 3'utr CG15097 FlyBase G24859.1 ACACACACACATGTTTCTAGTCAAGATCTCTCACACACACACAACATGGGAATGCCGCGGGGACACAACTCCTG 133 18822386 0.999702155 8 127 871 0.960784314 1.69019608 0.019607843 0.135338346 0.248366013 133 4 2 147 2R:18822327-18822400 8 CG15097 FBtr0330605|FBtr0086630|FBtr0330604|FBtr0303237 18822186|18822186|18822186|18822186 18822581|18822959|18822608|18822959 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R - 18822357 18822400 3'utr CG15097 FlyBase G18804.1 ACACACACACATGTTTCTAGTCAAGATCTCTCACACACACACAA 74 18822386 0.83947615 9 71 461 0.965217391 2.045322979 0.017391304 0.432432432 0.634782609 74 4 0 111 2R:18822357-18822400 8 101 1197 FBgn0034396 75.66666667 3.096666667 4.676666667 1.334801762 32.61571582 21.59657876 1 1 1 0.15 dme-miR-986-5p 6mer2-7 TTCGAG 2R 18837284 18837289 - 2R_18837284_18837289_- 0.991223183 0.994641484 0.992932334 0.002417103 CG15099 FBtr0086628 18836819 18837346 2R - 18837228 18837322 3'utr CG15099 FlyBase G24876.1 ACGCAGTCGCAGATCCAAGCGAGTGGGTCACACTTCGAGCTCAAGCTGAACCTGAACCTAGGTATGGAGTCTGCCATGGAGTCGGGCAGTACTGG 35 18837288 0.951119793 10 33 143 0.972222222 1.544068044 0.361111111 0.058823529 0.111111111 34 1 0 35 2R:18837228-18837322 6 CG15099 FBtr0086628 18836819 18837346 TTCGAG 6mer2-7 dme-miR-986-5p 2R - 18837233 18837306 3'utr CG15099 FlyBase G18819.1 AAGCGAGTGGGTCACACTTCGAGCTCAAGCTGAACCTGAACCTAGGTATGGAGTCTGCCATGGAGTCGGGCAGT 16 18837288 0.717558608 7 15 74 0.947368421 1.255272505 0.421052632 0.1875 0.315789474 16 1 0 18 2R:18837233-18837306 6 16.5 1198 FBgn0034400 3071.393333 43.47333333 66.98666667 0.005372155 0.379543015 0.246317675 -1 -1 -1 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 18846948 18846955 - 2R_18846948_18846955_- 0.62524807 0.62536425 0.62530616 8.22E-05 CG15100 FBtr0086627 18846856 18847082 2R - 18846901 18847065 3'utr CG15100 FlyBase G24926.1 TAAAAATCACGCTGGACGCTTTTACCTCAGCCCTTTTAATCAGGCATTCGATGGCAAATCTTTAGTCACGGACTGGCACAGTTCAATTCATCTCCCATAAGTTTTGCGTTTGCATTTAACAACCTTTTGTATTTATTCGAAGTATGGCTAAATATTCAGTTAGTA 38 18846956 0.797852664 12 38 298 1 1.643452676 0.113636364 0.105263158 0.227272727 38 0 0 44 2R:18846901-18847065 8 CG15100 FBtr0086627 18846856 18847082 TGCATTTA 8mer-A1 dme-miR-277-3p 2R - 18846928 18846967 3'utr CG15100 FlyBase G18855.1 AAGTTTTGCGTTTGCATTTAACAACCTTTTGTATTTATTC 11 18846956 0.989241882 2 10 103 0.923076923 1.079181246 0 0.181818182 0.307692308 11 1 0 12 2R:18846928-18846967 8 12.5 1199 FBgn0034401 874.54 30.91333333 47.1 0.014293228 0.404356265 0.265392781 1 1 1 0.15 dme-miR-14-3p 7mer-m8 AAGACTG 2R 18971406 18971412 - 2R_18971406_18971412_- 0.668178819 0.671792279 0.669985549 0.00255513 CG15107 FBtr0331978|FBtr0086600 18971307|18971307 18971590|18971590 2R - 18971383 18971423 3'utr CG15107 FlyBase G24977.1 TAGTCGTTTTTAAGACTGTTGTTATGCATATCGTTCGACGA 9 18971403 0.633926329 4 7 86 0.818181818 0.954242509 0.090909091 0.222222222 0.363636364 9 2 0 9 2R:18971383-18971423 7 CG15107 FBtr0086600|FBtr0331978 18971307|18971307 18971590|18971590 AAGACTG 7mer-m8 dme-miR-14-3p 2R - 18971401 18971422 3'utr CG15107 FlyBase G18891.1 AGTCGTTTTTAAGACTGTTGTT 5 18971405 0.788339959 2 2 27 0.444444444 0.602059991 0.777777778 0.4 0.666666667 5 5 0 4 2R:18971401-18971422 7 6.5 1200 FBgn0041702 455.9833333 51.29666667 78.86 0.014254907 0.126713887 0.08242455 -9 -7 -8 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2R 19133203 19133208 + 2R_19133203_19133208_+ 0.999999993 0.999999989 0.999999991 0 botv FBtr0086579 19133117 19133706 2R + 19133050 19133222 stop_codon botv FlyBase G17377.1 CGAGCGGACTCCATTCTCTTCAAGACGCGCATCCCGCACGACAAGCAAAAGTGCTTCAAGTACATCTAGTCGTACAACTGATCCCAGAATCCCTATTCCGACAAAGGCGGCCACTTCACTTATTATAACGAGGTGATCACCAGCTGAATGACTTCTAGTTGTAAGTAAAACTT 137 19133205 0.787927289 25 131 885 0.942675159 2.170261715 0.070063694 0.102189781 0.21656051 137 9 0 148 2R:19133050-19133222 6 botv FBtr0086579 19133117 19133706 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 19133045 19133224 stop_codon botv FlyBase G13244.1 AGTACCGAGCGGACTCCATTCTCTTCAAGACGCGCATCCCGCACGACAAGCAAAAGTGCTTCAAGTACATCTAGTCGTACAACTGATCCCAGAATCCCTATTCCGACAAAGGCGGCCACTTCACTTATTATAACGAGGTGATCACCAGCTGAATGACTTCTAGTTGTAAGTAAAACTTAT 68 19133205 0.979698851 15 61 440 0.91 1.481920138 0.13 0.338235294 0.55 68 7 2 91 2R:19133045-19133224 6 57.5 1201 FBgn0027535 455.35 15.33 23.50666667 0.126276491 3.750815395 2.446114577 -2 -2 -2 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 2R 19133618 19133623 + 2R_19133618_19133623_+ 0.999988795 0.998763219 0.999376007 0.00086663 botv FBtr0086579 19133117 19133706 2R + 19133570 19133660 3'utr botv FlyBase G17380.1 AGGAAATAGTCTTGAGTAGAGATACCAAATCAAATTTTGAGACTTTATTGTGTTTGCTTAATTAGCATAAGTTGTGTACCGATTTTGAATT 36 19133607 0.960860407 12 35 330 1 1.633468456 0.162790698 0.111111111 0.255813953 36 0 0 43 2R:19133570-19133660 6 botv FBtr0086579 19133117 19133706 TGTGTT 6mer3-8 dme-miR-317-3p 2R + 19133570 19133656 3'utr botv FlyBase G13246.1 AGGAAATAGTCTTGAGTAGAGATACCAAATCAAATTTTGAGACTTTATTGTGTTTGCTTAATTAGCATAAGTTGTGTACCGATTTTG 14 19133606 0.984779594 11 14 117 1 1.342422681 0.454545455 0.428571429 0.636363636 14 0 0 22 2R:19133570-19133656 6 15.5 1202 FBgn0027535 455.35 15.33 23.50666667 0.03403975 1.011089367 0.659387408 11 12 11.5 0.15 dme-miR-283-5p 7mer-A1 GATATTA 2R 19140920 19140926 + 2R_19140920_19140926_+ 0.782911647 0.782881364 0.782896505 2.14E-05 CG15111 FBtr0086581|FBtr0086580 19140905|19140905 19141034|19141034 2R + 19140871 19140934 stop_codon CG15111 FlyBase G17386.1 AAGTTTGTGGAGAACTACCGTGACGCCGTATACTAGGTGCGATCAACTGGATATTAATTTATGT 13 19140914 0.76680705 6 11 71 0.875 1.146128036 0.25 0.230769231 0.375 13 2 0 14 2R:19140871-19140934 7 CG15111 FBtr0086580|FBtr0086581 19140905|19140905 19141034|19141034 GATATTA 7mer-A1 dme-miR-283-5p 2R + 19140894 19140935 stop_codon CG15111 FlyBase G13251.1 CGCCGTATACTAGGTGCGATCAACTGGATATTAATTTATGTA 5 19140918 0.943838026 3 5 39 1 0.903089987 0 0.6 0.75 5 0 0 8 2R:19140894-19140935 7 5.5 1203 FBgn0034419 145.4233333 10.22333333 15.81333333 0.037820616 0.537985002 0.347807757 6 2 4 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 19162264 19162269 + 2R_19162264_19162269_+ 0.57527271 0.533870006 0.554571358 0.02927613 ena FBtr0100176|FBtr0086582|FBtr0114623|FBtr0340450|FBtr0086583|FBtr0086584 19161687|19161687|19161687|19161687|19161687|19161687 19162598|19162598|19162598|19163705|19162598|19162598 2R + 19162186 19162334 3'utr ena FlyBase G17407.1 TTTTTCGTTTGTTCTCCATACTACCCCACCTCTACCTTTTAGTTTGTTATGCTCGCCGGGATTTATCTATTGTTTCGTACCAAAAAACAACAAAATCAAAATGAACAACGTTTGTAATTATACATAGAACGTATCTCTCTATACACAGC 78 19162247 0.98295812 20 74 620 0.96875 1.968482949 0.208333333 0.166666667 0.322916667 78 3 0 93 2R:19162186-19162334 6 ena FBtr0086583|FBtr0086584|FBtr0114623|FBtr0340450|FBtr0100176|FBtr0086582 19161687|19161687|19161687|19161687|19161687|19161687 19162598|19162598|19162598|19163705|19162598|19162598 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 19162187 19162361 3'utr ena FlyBase G13272.1 TTTTCGTTTGTTCTCCATACTACCCCACCTCTACCTTTTAGTTTGTTATGCTCGCCGGGATTTATCTATTGTTTCGTACCAAAAAACAACAAAATCAAAATGAACAACGTTTGTAATTATACATAGAACGTATCTCTCTATACACAGCCACAAAAACATGCATATATATATATAT 63 19162247 0.907698834 25 58 489 0.933333333 1.924279286 0.188888889 0.317460317 0.522222222 63 6 0 84 2R:19162187-19162361 6 9.5 1204 FBgn0000578 7091.176667 212.0766667 326.4733333 0.001339693 0.044795121 0.029098854 17 17 17 0.15 dme-miR-968-5p 6mer3-8 ACTACT 2R 19162388 19162393 + 2R_19162388_19162393_+ 0.953736808 0.999998785 0.976867796 0.032712174 ena FBtr0100176|FBtr0086582|FBtr0114623|FBtr0340450|FBtr0086583|FBtr0086584 19161687|19161687|19161687|19161687|19161687|19161687 19162598|19162598|19162598|19163705|19162598|19162598 2R + 19162374 19162480 3'utr ena FlyBase G17408.1 TTTAATATATATGGACTACTCATTAAACTAACCTAAAGGGAACTAGTATTACGACTCAAAAACGAAATGAAAACAATTCCACAAACGTCATCCATCAAAGCTCCTGA 41 19162388 0.952222152 13 38 244 0.918367347 1.653212514 0.020408163 0.170731707 0.306122449 41 4 0 45 2R:19162374-19162480 6 ena FBtr0086583|FBtr0086584|FBtr0114623|FBtr0340450|FBtr0100176|FBtr0086582 19161687|19161687|19161687|19161687|19161687|19161687 19162598|19162598|19162598|19163705|19162598|19162598 ACTACT 6mer3-8 dme-miR-968-5p 2R + 19162372 19162453 3'utr ena FlyBase G13273.1 GGTTTAATATATATGGACTACTCATTAAACTAACCTAAAGGGAACTAGTATTACGACTCAAAAACGAAATGAAAACAATTCC 36 19162386 0.981496756 11 35 251 0.979591837 1.681241237 0 0.305555556 0.489795918 36 1 0 48 2R:19162372-19162453 6 27.5 1205 FBgn0000578 7091.176667 212.0766667 326.4733333 0.003878059 0.129670088 0.084233526 0 2 1 0.15 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA 2R 19226817 19226824 + 2R_19226817_19226824_+ 0.624479451 0.624302447 0.624390949 0.000125229 hppy FBtr0340454|FBtr0340456|FBtr0086504|FBtr0340455|FBtr0086503 19226138|19226138|19226138|19226138|19226138 19227193|19227193|19227193|19227193|19227193 2R + 19226762 19226838 3'utr hppy FlyBase G17434.1 GGTTAAACTGCTTTCGATTGGCTCAAAACCGCAACGGAAAATCAAGAACGAGAAATTGAAGAATGCGATATAGGATG 60 19226817 0.932200672 4 58 215 0.96969697 1.505149978 0.090909091 0.1 0.181818182 60 1 1 64 2R:19226762-19226838 8 hppy FBtr0086503|FBtr0340454|FBtr0340456|FBtr0086504|FBtr0340455 19226138|19226138|19226138|19226138|19226138 19227193|19227193|19227193|19227193|19227193 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p 2R + 19226805 19226840 3'utr hppy FlyBase G13296.1 AAGAACGAGAAATTGAAGAATGCGATATAGGATGAT 38 19226817 0.941939091 2 37 138 0.96 1.681241237 0.18 0.315789474 0.48 38 2 0 48 2R:19226805-19226840 8 46 1206 FBgn0263395 662.23 18.48666667 28.52 0.069462271 2.488279841 1.612903226 0 0 0 0.15 dme-miR-999-3p 8mer-A1 AGTTAACA 2R 19307854 19307861 - 2R_19307854_19307861_- 0.643054038 0.64391821 0.643486124 0.000611082 EndoB FBtr0113097|FBtr0113098|FBtr0086558|FBtr0086559 19307445|19307445|19307445|19307445 19308386|19308386|19308386|19308386 2R - 19307823 19307866 3'utr EndoB FlyBase G25011.1 ATCTTAGTTAACAAGCGAAATTCTCTGTGCTTTACTATATATCC 10 19307836 0.986357798 6 10 89 1 1.079181246 0.25 0.2 0.333333333 10 0 0 12 2R:19307823-19307866 8 EndoB FBtr0086559|FBtr0086558|FBtr0113098|FBtr0113097 19307445|19307445|19307445|19307445 19308386|19308386|19308386|19308386 AGTTAACA 8mer-A1 dme-miR-999-3p 2R - 19307821 19307874 3'utr EndoB FlyBase G18922.1 TTGTCAATATCTTAGTTAACAAGCGAAATTCTCTGTGCTTTACTATATATCCTA 6 19307838 0.985975524 4 6 56 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 2R:19307821-19307874 8 5 1207 FBgn0034433 435.3966667 24.15666667 36.94666667 0.011483781 0.2069822 0.135330206 -25 -23 -24 0.15 dme-miR-12-5p 8mer-A1 AATACTCA 2R 19308294 19308301 - 2R_19308294_19308301_- 0.64392452 0.643925511 0.643925015 7.07E-07 EndoB FBtr0113097|FBtr0113098|FBtr0086558|FBtr0086559 19307445|19307445|19307445|19307445 19308386|19308386|19308386|19308386 2R - 19308283 19308315 3'utr EndoB FlyBase G25012.1 ACTCCAAGTACGGCAATACTCATATGTTAAGAA 6 19308299 0.948809333 3 5 26 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2R:19308283-19308315 8 EndoB FBtr0086559|FBtr0086558|FBtr0113098|FBtr0113097 19307445|19307445|19307445|19307445 19308386|19308386|19308386|19308386 AATACTCA 8mer-A1 dme-miR-12-5p 2R - 19308232 19308312 3'utr EndoB FlyBase G18923.1 CCAAGTACGGCAATACTCATATGTTAAGAAAGCAGACACGATCGAGAGAAGGGAACGGCAATTGGACAATTAAAGGATGCG 11 19308290 0.940412771 5 11 44 1 1.113943352 0.076923077 0.181818182 0.307692308 11 0 0 13 2R:19308232-19308312 8 6.5 1208 FBgn0034433 435.3966667 24.15666667 36.94666667 0.014928915 0.269076859 0.175929267 -2 -11 -6.5 0.15 dme-miR-968-5p 7mer-m8 ACTACTT 2R 19367289 19367295 - 2R_19367289_19367295_- 0.501080748 0.520359191 0.510719969 0.013631958 CG9416 FBtr0334008|FBtr0086555 19367246|19367246 19367478|19367478 2R - 19367286 19367393 3'utr CG9416 FlyBase G25019.1 ATGGAGTGTACCAATTTTACCTAATCCAACGAACAAAGTGTCGATAAGCATGGCACGTCCTAAATTGTATTAGTATTTACGATTAGAACACTGTAGTTACTACTTTGT 21 19367301 0.959281365 12 21 138 1 1.414973348 0.307692308 0.238095238 0.384615385 21 0 0 26 2R:19367286-19367393 7 CG9416 FBtr0334008|FBtr0086555 19367246|19367246 19367478|19367478 ACTACTT 7mer-m8 dme-miR-968-5p 2R - 19367280 19367313 3'utr CG9416 FlyBase G18926.1 GATTAGAACACTGTAGTTACTACTTTGTAATTTT 6 19367302 0.986115163 3 5 54 0.818181818 0.954242509 0.272727273 0.5 0.727272727 6 2 0 9 2R:19367280-19367313 7 6 1209 FBgn0034438 3 0.123333333 0.186666667 2 48.64864865 32.14285714 6 7 6.5 0.15 dme-miR-11-3p 7mer-m1 TGTGATG 2R 19392219 19392225 - 2R_19392219_19392225_- 0.608297236 0.60979964 0.609048438 0.001062357 SdhA FBtr0086553|FBtr0086552|FBtr0086554 19391861|19391861|19391861 19392398|19392398|19392398 2R - 19392214 19392246 3'utr SdhA FlyBase G25033.1 CGGCAGCGGTTCCGGGCATTTTGTGATGAAACG 8 19392226 0.6701727 2 8 54 1 0.903089987 0.25 0 0 8 0 0 8 2R:19392214-19392246 7 SdhA FBtr0086553|FBtr0086552|FBtr0086554 19391861|19391861|19391861 19392398|19392398|19392398 TGTGATG 7mer-m1 dme-miR-11-3p 2R - 19392214 19392242 3'utr SdhA FlyBase G18934.1 AGCGGTTCCGGGCATTTTGTGATGAAACG 6 19392227 0.698667055 3 6 39 1 0.77815125 0.166666667 0 0 6 0 0 6 2R:19392214-19392242 7 7 1210 FBgn0261439 831.86 37.47666667 57.27666667 0.008414878 0.186782887 0.122213816 1 2 1.5 0.15 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 2R 19430692 19430697 - 2R_19430692_19430697_- 0.77651712 0.700227066 0.738372093 0.053945176 Fak FBtr0301883|FBtr0086542|FBtr0301882|FBtr0114605|FBtr0086543|FBtr0086544 19430657|19430657|19430657|19430657|19430657|19430657 19431105|19431105|19431105|19431105|19431105|19431105 2R - 19430669 19430712 3'utr Fak FlyBase G25076.1 CGAAGCTAATTATTTTGGTGCAAGGTTCAATCACAAAAAATAAA 6 19430698 0.986234677 4 6 48 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 2R:19430669-19430712 6 Fak FBtr0086543|FBtr0086544|FBtr0301882|FBtr0114605|FBtr0301883|FBtr0086542 19430657|19430657|19430657|19430657|19430657|19430657 19431105|19431105|19431105|19431105|19431105|19431105 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 2R - 19430676 19430713 3'utr Fak FlyBase G18957.1 TCGAAGCTAATTATTTTGGTGCAAGGTTCAATCACAAA 7 19430697 0.801824257 2 7 60 1 1 0.2 0.428571429 0.6 7 0 0 10 2R:19430676-19430713 6 6 1211 FBgn0020440 860.4633333 21.11 32.3 0.006972987 0.284225486 0.185758514 1 0 0.5 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 2R 19430739 19430745 - 2R_19430739_19430745_- 0.521223855 0.521223838 0.521223846 7.07E-08 Fak FBtr0301883|FBtr0086542|FBtr0301882|FBtr0114605|FBtr0086543|FBtr0086544 19430657|19430657|19430657|19430657|19430657|19430657 19431105|19431105|19431105|19431105|19431105|19431105 2R - 19430726 19430783 3'utr Fak FlyBase G25077.1 TTCATCATCAATTCGGGTGTGTTTTAAGACATTTATATTGTGATTTATAGTTTACCAT 28 19430746 0.714967241 10 27 306 0.971428571 1.531478917 0.171428571 0.214285714 0.371428571 28 1 0 34 2R:19430726-19430783 7 Fak FBtr0086543|FBtr0086544|FBtr0301882|FBtr0114605|FBtr0301883|FBtr0086542 19430657|19430657|19430657|19430657|19430657|19430657 19431105|19431105|19431105|19431105|19431105|19431105 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 19430718 19430758 3'utr Fak FlyBase G18958.1 AAGACATTTATATTGTGATTTATAGTTTACCATTATAGGCT 20 19430747 0.587276912 8 18 239 0.923076923 1.079181246 0.230769231 0.2 0.384615385 20 1 1 24 2R:19430718-19430758 7 22.5 1212 FBgn0020440 860.4633333 21.11 32.3 0.026148703 1.065845571 0.696594427 1 2 1.5 0.15 dme-miR-2b-2-5p 7mer-m8 TTGAAGA 2R 19430842 19430848 - 2R_19430842_19430848_- 0.631525999 0.502296249 0.566911124 0.091379268 Fak FBtr0301883|FBtr0086542|FBtr0301882|FBtr0114605|FBtr0086543|FBtr0086544 19430657|19430657|19430657|19430657|19430657|19430657 19431105|19431105|19431105|19431105|19431105|19431105 2R - 19430797 19430924 3'utr Fak FlyBase G25078.1 GACCCCAACTCGGCCGGCCGCATTCTCACATCGTCATGTAGTCAAAATAATTTAAGAAACAAAGACACGTTTTTGATTGAAGATGGCTAGTAATAGTAATTTATAGATAATCTACTCGATCTAATACA 28 19430841 0.98434722 14 25 200 0.9375 1.176091259 0.28125 0.142857143 0.25 28 1 1 30 2R:19430797-19430924 7 Fak FBtr0086543|FBtr0086544|FBtr0301882|FBtr0114605|FBtr0301883|FBtr0086542 19430657|19430657|19430657|19430657|19430657|19430657 19431105|19431105|19431105|19431105|19431105|19431105 TTGAAGA 7mer-m8 dme-miR-2b-2-5p 2R - 19430794 19430935 3'utr Fak FlyBase G18959.1 AAGTTTGACGAGACCCCAACTCGGCCGGCCGCATTCTCACATCGTCATGTAGTCAAAATAATTTAAGAAACAAAGACACGTTTTTGATTGAAGATGGCTAGTAATAGTAATTTATAGATAATCTACTCGATCTAATACAACT 22 19430842 0.98157243 15 21 109 0.973684211 1.568201724 0.315789474 0.545454545 0.736842105 22 1 0 37 2R:19430794-19430935 7 9.5 1213 FBgn0020440 860.4633333 21.11 32.3 0.011040563 0.450023685 0.294117647 -7 -6 -6.5 0.15 dme-miR-305-3p 6mer3-8 ATGTGC 2R 19482264 19482269 + 2R_19482264_19482269_+ 0.942909839 0.6792284 0.811069119 0.186450906 par-1 FBtr0100390|FBtr0301506|FBtr0086457|FBtr0301505 19481162|19481162|19481162|19481162 19482575|19482575|19482575|19482575 2R + 19482252 19482292 3'utr par-1 FlyBase G17628.1 CCCAGAAGCCAGATGTGCAGCGTATCTAGTAATTAAGCATA 12 19482266 0.979182934 2 10 73 0.785714286 0.740362689 0 0.166666667 0.285714286 12 2 1 11 2R:19482252-19482292 6 par-1 FBtr0301505|FBtr0301506|FBtr0100390|FBtr0086457 19481162|19481162|19481162|19481162 19482575|19482575|19482575|19482575 ATGTGC 6mer3-8 dme-miR-305-3p 2R + 19482238 19482290 3'utr par-1 FlyBase G13422.1 GCAATTCATAATCACCCAGAAGCCAGATGTGCAGCGTATCTAGTAATTAAGCA 7 19482265 0.960201912 3 6 33 1 1.146128036 0.071428571 0.571428571 0.785714286 7 0 0 14 2R:19482238-19482290 6 8.5 1214 FBgn0260934 5641.8 137.7133333 211.53 0.001506611 0.061722419 0.040183426 -2 -1 -1.5 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 19483412 19483417 + 2R_19483412_19483417_+ 0.685726408 0.812920049 0.749323228 0.089939457 par-1 FBtr0301503|FBtr0086450|FBtr0330244 19483406|19483406|19483406 19484473|19484473|19485686 2R + 19483380 19483416 stop_codon par-1 FlyBase G17632.1 GCGCATTGCTTTTGACCTCAAGCTGTGACTTAACCAA 8 19483409 0.805572456 3 7 52 0.9 0.954242509 0 0.125 0.3 8 1 0 9 2R:19483380-19483416 5 par-1 FBtr0086450|FBtr0301503|FBtr0330244 19483406|19483406|19483406 19484473|19484473|19485686 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 19483375 19483454 stop_codon par-1 FlyBase G13423.1 GCGTCGCGCATTGCTTTTGACCTCAAGCTGTGACTTAACCAAACGAACAACGAGGGGAATGCGGCCGCCACCGCCTCGCG 8 19483409 0.955974238 5 7 38 1 0.954242509 0.333333333 0.125 0.222222222 8 0 0 9 2R:19483375-19483454 6 5 1215 FBgn0260934 5641.8 137.7133333 211.53 0.000886242 0.036307305 0.023637309 3 3 3 0.15 dme-miR-307a-3p 6mer2-7 GTTGTG 2R 19485063 19485068 + 2R_19485063_19485068_+ 0.736008675 0.734471189 0.735239932 0.001087177 par-1 FBtr0330244 19483406 19485686 2R + 19484995 19485139 3'utr par-1 FlyBase G17637.1 AAAACATACCTTAGGGAGGAGCGATCTCAAGTGAGATGTAGAAAAGAAAAAGACGACCATTTATCTAAGTTGTGGAGGCTCAAAAAACAGTCTATATATATATACCAAAACATATACAAAGTTGCACATCAAGTTGTCTTCATCA 114 19485067 0.80210614 11 113 519 1 2.139879086 0.028985507 0.192982456 0.333333333 114 0 0 138 2R:19484995-19485139 6 par-1 FBtr0330244 19483406 19485686 GTTGTG 6mer2-7 dme-miR-307a-3p 2R + 19485042 19485109 3'utr par-1 FlyBase G13427.2 AAAAGACGACCATTTATCTAAGTTGTGGAGGCTCAAAAAACAGTCTATATATATATACCAAAACATAT 100 19485067 0.950925639 3 99 431 0.992907801 2.146128036 0 0.33 0.524822695 100 1 0 140 2R:19485042-19485109 6 96.5 1216 FBgn0260934 5641.8 137.7133333 211.53 0.01710447 0.700730987 0.456200066 -4 -4 -4 0.15 dme-miR-317-3p 6mer2-7 GTGTTC 2R 19485562 19485567 - 2R_19485562_19485567_- 0.992742237 0.993854732 0.993298484 0.000786656 TBCB FBtr0086502 19485492 19485802 2R - 19485554 19485603 3'utr TBCB FlyBase G25102.1 AATTCTATAATCGGCTTTATCATAACTGATTTAATGGTGTTCTCAATCAT 36 19485569 0.786405796 8 36 360 1 1.612783857 0.170731707 0.083333333 0.195121951 36 0 0 41 2R:19485554-19485603 6 TBCB FBtr0086502 19485492 19485802 GTGTTC 6mer2-7 dme-miR-317-3p 2R - 19485554 19485606 3'utr TBCB FlyBase G18982.1 GTAAATTCTATAATCGGCTTTATCATAACTGATTTAATGGTGTTCTCAATCAT 21 19485569 0.80556756 6 20 206 0.965517241 1.447158031 0.206896552 0.285714286 0.482758621 21 1 0 28 2R:19485554-19485606 6 24 1217 FBgn0034451 695.71 73.74666667 112.8533333 0.034497132 0.325438438 0.212665406 2 2 2 0.15 dme-miR-283-5p 6mer3-8 TGATAT 2R 19485631 19485636 + 2R_19485631_19485636_+ 0.99612869 0.999446437 0.997787563 0.002345968 par-1 FBtr0330244 19483406 19485686 2R + 19485611 19485671 3'utr par-1 FlyBase G17639.1 AATCATGTTGTAAGAATATCTGATATACATACATACATAGATGTTTTAATTAATAAATAAA 5 19485634 0.96577454 3 5 37 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 2R:19485611-19485671 6 par-1 FBtr0330244 19483406 19485686 TGATAT 6mer3-8 dme-miR-283-5p 2R + 19485607 19485647 3'utr par-1 FlyBase G13429.1 GAATAATCATGTTGTAAGAATATCTGATATACATACATACA 12 19485634 0.756985156 5 12 79 1 1.301029996 0.1 0.583333333 0.75 12 0 0 20 2R:19485607-19485647 6 7 1218 FBgn0260934 5641.8 137.7133333 211.53 0.001240739 0.050830227 0.033092233 -3 -3 -3 0.15 dme-miR-14-3p 6mer3-8 AAGACT 2R 19485734 19485739 - 2R_19485734_19485739_- 0.988449892 0.995717944 0.992083918 0.005139252 TBCB FBtr0086502 19485492 19485802 2R - 19485648 19485785 3'utr TBCB FlyBase G25103.1 ACACACAGGTCACACAATCTCGCATCGCACATGCCACCTTAAACAGAAGACTTACGAACCGCTAAAACTATTTGTACGCATGAAAGAACATTACAAATTATAGTTATGCCATTTTTTATTTATTAATTAAAACATCTA 65 19485747 0.970363389 19 52 310 0.825 1.120573931 0.0875 0.215384615 0.3625 65 10 4 66 2R:19485648-19485785 6 TBCB FBtr0086502 19485492 19485802 AAGACT 6mer3-8 dme-miR-14-3p 2R - 19485700 19485782 3'utr TBCB FlyBase G18983.1 CACAGGTCACACAATCTCGCATCGCACATGCCACCTTAAACAGAAGACTTACGAACCGCTAAAACTATTTGTACGCATGAAAG 27 19485747 0.948789915 6 24 103 0.902439024 1.568201724 0.024390244 0.37037037 0.585365854 27 4 0 37 2R:19485700-19485782 6 25 1219 FBgn0034451 695.71 73.74666667 112.8533333 0.035934513 0.338998373 0.221526465 8 8 8 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 2R 19494075 19494081 + 2R_19494075_19494081_+ 0.612707728 0.620185487 0.616446608 0.005287603 Rep FBtr0086462 19493874 19494125 2R + 19494052 19494090 3'utr Rep FlyBase G17649.1 ATGTTTAAATGTGAGTGTTTCTGTGCATTTTGCTTTGAT 9 19494081 0.966513053 5 9 88 1 1.041392685 0.272727273 0.111111111 0.272727273 9 0 0 11 2R:19494052-19494090 7 Rep FBtr0086462 19493874 19494125 TGCATTT 7mer-m8 dme-miR-277-3p 2R + 19494053 19494093 3'utr Rep FlyBase G13436.1 TGTTTAAATGTGAGTGTTTCTGTGCATTTTGCTTTGATAAA 5 19494069 0.974675023 5 5 57 1 0.903089987 0.125 0.4 0.625 5 0 0 8 2R:19494053-19494093 7 6 1220 FBgn0026378 268.7033333 16.93666667 25.81 0.022329459 0.354260972 0.232468036 -6 6 0 0.15 dme-bantam-3p 6mer3-8 TGATCT 2R 19494350 19494355 - 2R_19494350_19494355_- 0.969785466 0.986858737 0.978322101 0.012072575 hpo FBtr0331920|FBtr0086500 19493994|19494295 19494681|19494681 2R - 19494323 19494379 3'utr hpo FlyBase G25107.1 GGTTTCTTATATCCTAGCTTTCATTGATCTGTCTTTTAATATAAATAGGTATGCTCG 169 19494355 0.809692525 8 161 2042 0.958549223 1.790050474 0.015544041 0.130177515 0.238341969 169 6 2 185 2R:19494323-19494379 6 hpo FBtr0331920|FBtr0086500 19493994|19494295 19494681|19494681 TGATCT 6mer3-8 dme-bantam-3p 2R - 19494327 19494380 3'utr hpo FlyBase G18987.1 TGGTTTCTTATATCCTAGCTTTCATTGATCTGTCTTTTAATATAAATAGGTATG 85 19494355 0.779552891 12 79 990 0.93495935 1.759667845 0.024390244 0.317647059 0.528455285 85 7 1 115 2R:19494327-19494380 6 125 1221 FBgn0261456 615.7733333 26.58 40.65333333 0.202996774 4.702784048 3.074778616 0 0 0 0.15 dme-miR-263a-5p 7mer-m8 GTGCCAT 2R 19504023 19504029 + 2R_19504023_19504029_+ 0.657507116 0.617946029 0.637726572 0.027973922 CG11007 FBtr0086464|FBtr0345929 19504002|19504002 19504268|19504594 2R + 19504010 19504066 3'utr CG11007 FlyBase G17652.1 CTGTCCACCACTGGTGCCATCTCATTTCTGCGTGCACGTGCTAATAACTGTTATTCG 11 19504022 0.965188487 9 10 79 0.923076923 1.079181246 0.153846154 0.090909091 0.230769231 11 1 0 12 2R:19504010-19504066 7 CG11007 FBtr0345929|FBtr0086464 19504002|19504002 19504594|19504268 GTGCCAT 7mer-m8 dme-miR-263a-5p 2R + 19504009 19504057 3'utr CG11007 FlyBase G13437.1 CCTGTCCACCACTGGTGCCATCTCATTTCTGCGTGCACGTGCTAATAAC 5 19504035 0.98888547 4 4 33 0.833333333 0.698970004 0.166666667 0.2 0.333333333 5 1 0 5 2R:19504009-19504057 7 3 1222 FBgn0034455 282.3433333 27.99666667 42.39333333 0.010625362 0.107155614 0.070765844 1 -12 -5.5 0.15 dme-miR-8-3p 7mer-m8 CAGTATT 2R 19665393 19665399 - 2R_19665393_19665399_- 0.659783515 0.661602241 0.660692878 0.001286015 hrg FBtr0111010 19665258 19666023 2R - 19665347 19665419 3'utr hrg FlyBase G25135.1 ACTTTTACGTATTCTATAACCAGTATTCCGCCAATGTGGAAACAATCTAACAAAAACATACCTCTAATTTTTT 13 19665394 0.983287683 8 12 92 0.9375 1.176091259 0 0.230769231 0.375 13 1 0 15 2R:19665347-19665419 7 hrg FBtr0111010 19665258 19666023 CAGTATT 7mer-m8 dme-miR-8-3p 2R - 19665337 19665403 3'utr hrg FlyBase G19008.1 TAACCAGTATTCCGCCAATGTGGAAACAATCTAACAAAAACATACCTCTAATTTTTTAAGTTTTAAA 6 19665385 0.95826897 4 6 33 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 2R:19665337-19665403 7 7.5 1223 FBgn0015949 2895.236667 92.73333333 142.2466667 0.002590462 0.080877067 0.052725313 -5 -14 -9.5 0.15 dme-miR-14-3p 6mer2-7 AGACTG 2R 19665450 19665455 - 2R_19665450_19665455_- 0.761965913 0.762820928 0.76239342 0.000604576 hrg FBtr0111010 19665258 19666023 2R - 19665429 19665505 3'utr hrg FlyBase G25136.1 TTCCTCGTTATCGTACTCTCTTTTCATTTTCCCCAACTTCCTTTGACACGAGACTGTTTCTGTACTCTTAAGTTGCC 144 19665448 0.672721724 18 137 1319 0.949438202 1.625826713 0.02247191 0.201388889 0.353932584 144 6 3 169 2R:19665429-19665505 6 hrg FBtr0111010 19665258 19666023 AGACTG 6mer2-7 dme-miR-14-3p 2R - 19665414 19665509 3'utr hrg FlyBase G19009.1 GTTTTTCCTCGTTATCGTACTCTCTTTTCATTTTCCCCAACTTCCTTTGACACGAGACTGTTTCTGTACTCTTAAGTTGCCTATCTACTTACTTTT 95 19665448 0.984980435 16 89 887 0.944055944 1.653212514 0.041958042 0.410526316 0.608391608 95 6 2 135 2R:19665414-19665509 6 104.5 1224 FBgn0015949 2895.236667 92.73333333 142.2466667 0.036093768 1.126887132 0.734639359 -7 -7 -7 0.15 dme-miR-2a-2-5p 6mer3-8 TGATGA 2R 19665677 19665682 - 2R_19665677_19665682_- 0.916643038 0.924874883 0.920758961 0.005820832 hrg FBtr0086484|FBtr0086483|FBtr0111010 19663917|19663917|19665258 19666023|19666023|19666023 2R - 19665634 19665726 3'utr hrg FlyBase G25138.1 AACGGCGGTGGCGGCGGCAGCCACTACAACAAAACGTACTACATTGATGATGATGACGAGGACAACAATCAACCACTTTTGACACCTAACAAC 48 19665683 0.718161014 8 47 240 0.980769231 1.707570176 0.057692308 0.083333333 0.153846154 48 1 0 51 2R:19665634-19665726 6 hrg FBtr0111010|FBtr0086484|FBtr0086483 19665258|19663917|19663917 19666023|19666023|19666023 TGATGA 6mer3-8 dme-miR-2a-2-5p 2R - 19665659 19665702 3'utr hrg FlyBase G19010.1 TACAACAAAACGTACTACATTGATGATGATGACGAGGACAACAA 14 19665683 0.956381414 4 14 69 1 1.397940009 0.08 0.642857143 0.8 14 0 0 25 2R:19665659-19665702 6 28 1225 FBgn0015949 2895.236667 92.73333333 142.2466667 0.009671057 0.30194105 0.196841168 1 1 1 0.15 dme-miR-79-3p 6mer3-8 TAGCTT 2R 19672899 19672904 + 2R_19672899_19672904_+ 0.968525592 0.999862779 0.984194185 0.022158747 isopeptidase-T-3 FBtr0330247|FBtr0086473|FBtr0086474 19672808|19672808|19672808 19673477|19673477|19673175 2R + 19672875 19672918 3'utr isopeptidase-T-3 FlyBase G17657.1 TCACACACCCGAAGTGCATGGCTGTAGCTTGGTCCATTTTGGGG 9 19672893 0.977757846 3 8 58 0.909090909 1 0.272727273 0.222222222 0.363636364 9 1 0 10 2R:19672875-19672918 6 isopeptidase-T-3 FBtr0330247|FBtr0086473|FBtr0086474 19672808|19672808|19672808 19673477|19673477|19673175 TAGCTT 6mer3-8 dme-miR-79-3p 2R + 19672873 19672910 3'utr isopeptidase-T-3 FlyBase G13442.1 AATCACACACCCGAAGTGCATGGCTGTAGCTTGGTCCA 6 19672893 0.962992376 3 6 29 1 1.041392685 0.272727273 0.5 0.727272727 6 0 0 11 2R:19672873-19672910 6 7.5 1226 FBgn0028372 205.4433333 10.11 15.41666667 0.036506417 0.741839763 0.486486486 6 6 6 0.15 dme-miR-1006-3p 6mer3-8 CGAATT 2R 19673064 19673069 + 2R_19673064_19673069_+ 0.503945422 0.449989801 0.476967612 0.038152371 isopeptidase-T-3 FBtr0330247|FBtr0086473|FBtr0086474 19672808|19672808|19672808 19673477|19673477|19673175 2R + 19673022 19673090 3'utr isopeptidase-T-3 FlyBase G17658.1 AAGAGCACGCGGCTGCACTCTACAAACGCTTACCGATCAGTACGAATTGCATTTTATACATACATATAC 70 19673058 0.938364935 6 68 371 0.967032967 1.944482672 0.241758242 0.257142857 0.428571429 70 3 0 88 2R:19673022-19673090 6 isopeptidase-T-3 FBtr0330247|FBtr0086473|FBtr0086474 19672808|19672808|19672808 19673477|19673477|19673175 CGAATT 6mer3-8 dme-miR-1006-3p 2R + 19673024 19673079 3'utr isopeptidase-T-3 FlyBase G13443.1 GAGCACGCGGCTGCACTCTACAAACGCTTACCGATCAGTACGAATTGCATTTTATA 30 19673058 0.96641962 4 29 152 0.978723404 1.361727836 0.340425532 0.3 0.553191489 30 0 1 46 2R:19673024-19673079 6 46.5 1227 FBgn0028372 205.4433333 10.11 15.41666667 0.226339786 4.599406528 3.016216216 6 6 6 0.15 dme-miR-12-5p 7mer-A1 ATACTCA 2R 20261272 20261278 + 2R_20261272_20261278_+ 0.823349146 0.823348817 0.823348981 2.12E-07 Hsl FBtr0086270|FBtr0086271|FBtr0086272 20260958|20260958|20260958 20261726|20261726|20261726 2R + 20261240 20261354 3'utr Hsl FlyBase G17690.1 AATTTTATATGACACAGCTTTCTATGTTTTATATACTCACAAACTAAGTATAGGATACGTATGTATGTAGCTTCTAGCATAAGCAAGCCAAGTATGCAAGTATTGGAAGCGTGTA 33 20261267 0.895440853 15 32 291 0.976744186 1.62324929 0.139534884 0.272727273 0.441860465 33 1 0 42 2R:20261240-20261354 7 Hsl FBtr0086272|FBtr0086270|FBtr0086271 20260958|20260958|20260958 20261726|20261726|20261726 ATACTCA 7mer-A1 dme-miR-12-5p 2R + 20261244 20261284 3'utr Hsl FlyBase G13466.2 TTATATGACACAGCTTTCTATGTTTTATATACTCACAAACT 9 20261266 0.635329449 7 8 87 0.928571429 1.113943352 0.071428571 0.444444444 0.642857143 9 1 0 13 2R:20261244-20261284 7 9 1228 FBgn0034491 654.3266667 22.12333333 33.89333333 0.013754598 0.406810306 0.265538946 5 6 5.5 0.15 dme-miR-980-3p 6mer2-7 GCAGCT 2R 20261551 20261556 + 2R_20261551_20261556_+ 0.999977686 0.999997922 0.999987804 1.43E-05 Hsl FBtr0086270|FBtr0086271|FBtr0086272 20260958|20260958|20260958 20261726|20261726|20261726 2R + 20261386 20261644 3'utr Hsl FlyBase G17691.1 ACGATTAATGCTCTTGAATGCAGGCACACACTCGCTTAAAGCTCTTTGTTGCAAAACTCCCGACTATGTGCCTCATACGGAACGAGTACTTATACACAGTGAATAGAATAATCGCCCATTATTACCCTTGATTTAGAACTCCCCAATGGTATGTCCAGATTTTCTGCAGCTGCGGAGGCTAACAAACTTCAATGTCGGAGATATGCCAAGGTTTTTTGTCTATCCCACGCCAAGGTGTTTGATAAACCACTACTCTTAA 64 20261549 0.813340494 29 59 388 0.935064935 1.380211242 0.233766234 0.125 0.272727273 64 3 2 72 2R:20261386-20261644 6 Hsl FBtr0086272|FBtr0086270|FBtr0086271 20260958|20260958|20260958 20261726|20261726|20261726 GCAGCT 6mer2-7 dme-miR-980-3p 2R + 20261479 20261573 3'utr Hsl FlyBase G13470.1 ACACAGTGAATAGAATAATCGCCCATTATTACCCTTGATTTAGAACTCCCCAATGGTATGTCCAGATTTTCTGCAGCTGCGGAGGCTAACAAACT 23 20261532 0.977059728 9 22 143 0.967741935 1.477121255 0.258064516 0.260869565 0.451612903 23 1 0 30 2R:20261479-20261573 6 13.5 1229 FBgn0034491 654.3266667 22.12333333 33.89333333 0.020631896 0.610215459 0.398308419 2 19 10.5 0.15 dme-miR-318-3p 7mer-m8 CCCAGTG 2R 20261683 20261689 + 2R_20261683_20261689_+ 0.645154711 0.535226237 0.590190474 0.077731188 Hsl FBtr0086270|FBtr0086271|FBtr0086272 20260958|20260958|20260958 20261726|20261726|20261726 2R + 20261646 20261705 3'utr Hsl FlyBase G17691.2 ATGTATATGTTTGCAATCTCTCTCTCCTTAAACGATACCCAGTGTTATATATGGAATGCG 17 20261670 0.786645961 9 16 150 1 1.255272505 0.111111111 0.058823529 0.111111111 17 0 0 18 2R:20261646-20261705 7 Hsl FBtr0086272|FBtr0086270|FBtr0086271 20260958|20260958|20260958 20261726|20261726|20261726 CCCAGTG 7mer-m8 dme-miR-318-3p 2R + 20261626 20261705 3'utr Hsl FlyBase G13471.1 GATAAACCACTACTCTTAATATGTATATGTTTGCAATCTCTCTCTCCTTAAACGATACCCAGTGTTATATATGGAATGCG 16 20261668 0.990491578 8 13 134 0.85 0.929418926 0.1 0.1875 0.35 16 2 1 17 2R:20261626-20261705 7 6 1230 FBgn0034491 654.3266667 22.12333333 33.89333333 0.009169732 0.271206871 0.177025964 13 15 14 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 20270862 20270867 + 2R_20270862_20270867_+ 0.968550496 0.974329201 0.971439849 0.004086158 CG8908 FBtr0339542|FBtr0339542|FBtr0339542 20270784|20270784|20270784 20270994|20270994|20270994 2R + 20270836 20270881 3'utr CG8908 FlyBase G17697.1 AACCCTTATCGTATCAGCGAAACTATCTGTGAAAGCTTTGCTTCCG 10 20270861 0.983664445 3 9 73 0.818181818 0.954242509 0.181818182 0.1 0.181818182 10 2 0 9 2R:20270836-20270881 6 CG8908 FBtr0339542|FBtr0339542|FBtr0339542 20270784|20270784|20270784 20270994|20270994|20270994 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 20270851 20270875 3'utr CG8908 FlyBase G13478.1 AGCGAAACTATCTGTGAAAGCTTTG 5 20270861 0.873066299 2 4 22 0.666666667 0.602059991 0.5 0.2 0.333333333 5 2 0 4 2R:20270851-20270875 6 7.5 1231 FBgn0034493 153.9366667 3.596666667 5.44 0.048721336 2.085264133 1.378676471 1 1 1 0.15 dme-miR-12-5p 6mer2-7 ATACTC 2R 20270957 20270962 + 2R_20270957_20270962_+ 0.99853957 0.999334969 0.99893727 0.000562433 CG8908 FBtr0339542 20270784 20270994 2R + 20270937 20270975 3'utr CG8908 FlyBase G17698.1 AATCATCAGTCGCCAAATTGATACTCTTATATGTAAATC 17 20270955 0.838425112 2 16 148 0.944444444 1.230448921 0 0.058823529 0.111111111 17 1 0 17 2R:20270937-20270975 6 CG8908 FBtr0339542 20270784 20270994 ATACTC 6mer2-7 dme-miR-12-5p 2R + 20270944 20270974 3'utr CG8908 FlyBase G13479.1 AGTCGCCAAATTGATACTCTTATATGTAAAT 14 20270955 0.707905213 4 13 100 0.913043478 1.322219295 0.043478261 0.357142857 0.608695652 14 2 0 21 2R:20270944-20270974 6 15.5 1232 FBgn0034493 153.9366667 3.596666667 5.44 0.10069076 4.309545876 2.849264706 2 2 2 0.15 dme-miR-252-5p 7mer-m8 GTACTTA 2R 20281767 20281773 - 2R_20281767_20281773_- 0.576848015 0.585826159 0.581337087 0.006348546 CG16868 FBtr0086302 20281627 20282149 2R - 20281714 20281800 3'utr CG16868 FlyBase G25216.1 TATTTGATAAGCACCAACAACAGAAATGTACTTACTTGTCTGATTGTAAGATACCATGTCGTATATCGTTTTTTGTAATAGCCCCTA 76 20281774 0.980514084 9 75 469 1 1.991226076 0.020408163 0.236842105 0.408163265 76 0 0 98 2R:20281714-20281800 7 CG16868 FBtr0086302 20281627 20282149 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 20281738 20281797 3'utr CG16868 FlyBase G19068.1 TTGATAAGCACCAACAACAGAAATGTACTTACTTGTCTGATTGTAAGATACCATGTCGTA 58 20281774 0.978303672 5 55 372 0.95 1.880813592 0.0125 0.25862069 0.4625 58 4 0 76 2R:20281738-20281797 7 63 1233 FBgn0034498 322.4366667 7.546666667 11.61333333 0.195387208 8.348056537 5.424799082 1 1 1 0.15 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 2R 20324528 20324533 + 2R_20324528_20324533_+ 0.99897147 0.999999986 0.999485728 0.000727259 CG8920 FBtr0086281|FBtr0301207 20324518|20324518 20324717|20324717 2R + 20324504 20324539 stop_codon CG8920 FlyBase G17711.1 AAACAACGACATCTGAATTGTGACTGGTGCCCTATA 59 20324522 0.612507206 6 58 386 0.987654321 1.903089987 0.12345679 0.322033898 0.50617284 59 1 0 80 2R:20324504-20324539 6 CG8920 FBtr0086281|FBtr0301207 20324518|20324518 20324717|20324717 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 2R + 20324504 20324549 stop_codon CG8920 FlyBase G13490.1 AAACAACGACATCTGAATTGTGACTGGTGCCCTATAAGTTTATATT 22 20324523 0.948628914 4 21 146 0.975 1.591064607 0.075 0.5 0.725 22 1 0 39 2R:20324504-20324549 6 40.5 1234 FBgn0027529 763.31 27.44 42.03333333 0.05305839 1.475947522 0.963521015 6 5 5.5 0.15 dme-miR-283-5p 6mer3-8 TGATAT 2R 20324615 20324620 + 2R_20324615_20324620_+ 0.978201192 0.980851679 0.979526435 0.001874187 CG8920 FBtr0086281|FBtr0301207 20324518|20324518 20324717|20324717 2R + 20324598 20324635 3'utr CG8920 FlyBase G17712.1 ATAAACCGGAACTGACTTGATATGTTATTGCTAACACA 8 20324615 0.735816155 3 8 52 1 0.954242509 0.222222222 0.125 0.222222222 8 0 0 9 2R:20324598-20324635 6 CG8920 FBtr0086281|FBtr0301207 20324518|20324518 20324717|20324717 TGATAT 6mer3-8 dme-miR-283-5p 2R + 20324584 20324620 3'utr CG8920 FlyBase G13491.1 CTATAAGTGCTTCAATAAACCGGAACTGACTTGATAT 5 20324599 0.931782444 3 5 24 1 0.698970004 0 0 0 5 0 0 5 2R:20324584-20324620 6 6 1235 FBgn0027529 763.31 27.44 42.03333333 0.007860502 0.218658892 0.142743854 0 16 8 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 2R 20559469 20559475 - 2R_20559469_20559475_- 0.521212483 0.521221861 0.521217172 6.65E-06 Mgat1 FBtr0086259 20559154 20560039 2R - 20559451 20559566 3'utr Mgat1 FlyBase G25232.2 TAGCAATGGTTAAGTTATAGTATGCAGCGTGTAATTTGTAGCATTTAAGTTGATCCAACTAGAGTTCTAACGGCAACGGACGTGTAATATTTGTGATTTTTGATTATTTAATTTAC 172 20559477 0.985210997 18 162 1872 0.95631068 1.817344971 0.427184466 0.162790698 0.300970874 172 7 2 197 2R:20559451-20559566 7 Mgat1 FBtr0086259 20559154 20560039 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 20559451 20559534 3'utr Mgat1 FlyBase G19081.1 AATTTGTAGCATTTAAGTTGATCCAACTAGAGTTCTAACGGCAACGGACGTGTAATATTTGTGATTTTTGATTATTTAATTTAC 118 20559477 0.975422873 14 111 1290 0.948571429 1.742986833 0.394285714 0.389830508 0.588571429 118 7 2 166 2R:20559451-20559534 7 129.5 1236 FBgn0034521 428.4 18.24333333 27.83333333 0.302287582 7.098483464 4.652694611 2 2 2 0.15 dme-miR-14-3p 8mer-A1 AAGACTGA 2R 20620888 20620895 + 2R_20620888_20620895_+ 0.641544448 0.642978689 0.642261568 0.001014203 CG9945 FBtr0086226|FBtr0086225 20620747|20620747 20620997|20621081 2R + 20620842 20620914 3'utr CG9945 FlyBase G17751.1 ATATTCACCACAGTCGGGCCGGCTGGGATAATTGGTTCTATTAAATAAGACTGAAGAATATGTCACTCACTTG 88 20620887 0.785108672 15 84 616 0.94 1.973127854 0.17 0.125 0.23 88 6 0 94 2R:20620842-20620914 8 CG9945 FBtr0086225 20620747 20621081 AAGACTGA 8mer-A1 dme-miR-14-3p 2R + 20620814 20620907 3'utr CG9945 FlyBase G13517.1 TAGTGGCTTGCCTAAGCGACGCACGAGAATATTCACCACAGTCGGGCCGGCTGGGATAATTGGTTCTATTAAATAAGACTGAAGAATATGTCAC 40 20620886 0.985662323 10 34 282 0.8125 1.414973348 0.140625 0.375 0.609375 40 11 1 52 2R:20620814-20620907 8 42.5 1237 FBgn0034527 339.9533333 21.37333333 32.82 0.125017159 1.988459139 1.294942108 1 2 1.5 0.15 dme-miR-932-5p 8mer-A1 GGAATTGA 2R 20634028 20634035 - 2R_20634028_20634035_- 0.674982192 0.674982778 0.674982485 4.24E-07 rig FBtr0086252 20633874 20634190 2R - 20634009 20634053 3'utr rig FlyBase G25265.1 AATAGCCAGAAACTGTGTGGAATTGAAACCGATTTGAGTCGCCTT 11 20634037 0.895031137 4 8 48 0.923076923 1.079181246 0.307692308 0.181818182 0.307692308 11 1 0 12 2R:20634009-20634053 8 rig FBtr0086252 20633874 20634190 GGAATTGA 8mer-A1 dme-miR-932-5p 2R - 20634009 20634052 3'utr rig FlyBase G19107.1 ATAGCCAGAAACTGTGTGGAATTGAAACCGATTTGAGTCGCCTT 10 20634036 0.767282895 6 10 44 1 1.113943352 0 0.3 0.461538462 10 0 0 13 2R:20634009-20634052 8 9 1238 FBgn0250850 1237.703333 36.17666667 55.41333333 0.007271532 0.248779139 0.162415784 2 1 1.5 0.15 dme-miR-307a-3p 6mer2-7 GTTGTG 2R 20642498 20642503 + 2R_20642498_20642503_+ 0.575819973 0.952685189 0.764252581 0.266483939 CG11110 FBtr0086231 20642416 20642558 2R + 20642456 20642539 3'utr CG11110 FlyBase G17760.1 CCAATTGTGTACATACTGAACCGTATATTTTATAAACAATTTGTTGTGTTCCCGCATGCAAAGCAAAGTAGGATGTTCCAAAGT 9 20642499 0.969251538 9 9 53 1 1.079181246 0.083333333 0.333333333 0.5 9 0 0 12 2R:20642456-20642539 6 CG11110 FBtr0086231 20642416 20642558 GTTGTG 6mer2-7 dme-miR-307a-3p 2R + 20642477 20642539 3'utr CG11110 FlyBase G13523.1 CGTATATTTTATAAACAATTTGTTGTGTTCCCGCATGCAAAGCAAAGTAGGATGTTCCAAAGT 16 20642499 0.663061903 5 14 116 0.80952381 0.929418926 0.095238095 0.25 0.428571429 16 3 1 17 2R:20642477-20642539 6 8 1239 FBgn0034535 57.65333333 9.79 14.88666667 0.138760407 0.817160368 0.537393641 -1 -1 -1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 20662888 20662893 - 2R_20662888_20662893_- 0.999999953 0.999999265 0.999999609 4.95E-07 Fem-1 FBtr0086246|FBtr0086246|FBtr0086246|FBtr0086245|FBtr0086245|FBtr0086245 20662472|20662472|20662472|20662472|20662472|20662472 20662931|20662931|20662931|20662931|20662931|20662931 2R - 20662868 20662946 stop_codon Fem-1 FlyBase G25284.1 AAGGTGCTGCCGTAGATAGTCAATGGCTTGAGCCGCAACTGAAGTAATTAGAACTGTGAATACAATAAGCCACGTTGGA 42 20662886 0.926851832 10 38 223 0.9 1.352182518 0.14 0.166666667 0.3 42 4 1 45 2R:20662868-20662946 6 Fem-1 FBtr0086245|FBtr0086245|FBtr0086245|FBtr0086246|FBtr0086246|FBtr0086246 20662472|20662472|20662472|20662472|20662472|20662472 20662931|20662931|20662931|20662931|20662931|20662931 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 20662875 20662942 stop_codon Fem-1 FlyBase G19121.1 TGCTGCCGTAGATAGTCAATGGCTTGAGCCGCAACTGAAGTAATTAGAACTGTGAATACAATAAGCCA 28 20662899 0.789405457 10 24 144 0.825 1.041392685 0.275 0.321428571 0.525 28 5 2 33 2R:20662875-20662942 6 27.5 1240 FBgn0034542 388.61 17.94666667 27.52666667 0.070765034 1.532317979 0.999031242 -7 6 -0.5 0.15 dme-miR-2b-2-5p 6mer2-7 TGAAGA 2R 20827604 20827609 - 2R_20827604_20827609_- 0.999960339 0.995807151 0.997883745 0.002936685 sktl FBtr0071563 20827280 20827991 2R - 20827599 20827647 5'utr sktl FlyBase G25309.1 TTCTACTTGGTTGGAATTTGTTAGCGTGTTGCCTTAGCTGAAGATTTTG 15 20827614 0.686285335 7 14 122 0.944444444 0.929418926 0.166666667 0.133333333 0.277777778 15 0 1 17 2R:20827599-20827647 6 sktl FBtr0071563 20827280 20827991 TGAAGA 6mer2-7 dme-miR-2b-2-5p 2R - 20827553 20827628 5'utr sktl FlyBase G19138.1 GTTAGCGTGTTGCCTTAGCTGAAGATTTTGTTTTAATTTTTGAAATTATTGTGCTCGACAAGCGATGGGCTCAATC 8 20827614 0.979389517 5 7 54 1 1.146128036 0.357142857 0.375 0.642857143 8 0 0 14 2R:20827553-20827628 6 8 1241 FBgn0016984 2187.616667 79.33666667 122.04 0.003656948 0.100836099 0.065552278 5 5 5 0.15 dme-miR-34-5p 7mer-A1 ACTGCCA 2R 20827762 20827768 - 2R_20827762_20827768_- 0.821484298 0.821920679 0.821702488 0.000308581 sktl FBtr0071563 20827280 20827991 2R - 20827755 20827789 5'utr sktl FlyBase G25311.1 ATGTGGCGCCCGTGCTAATTGACTGCCAACTAGAC 12 20827771 0.738087096 2 12 68 1 1.079181246 0.416666667 0 0 12 0 0 12 2R:20827755-20827789 7 sktl FBtr0071563 20827280 20827991 ACTGCCA 7mer-A1 dme-miR-34-5p 2R - 20827748 20827796 5'utr sktl FlyBase G19139.1 GAAATTTATGTGGCGCCCGTGCTAATTGACTGCCAACTAGACACGCTAC 11 20827770 0.842636229 3 9 60 0.882352941 0.698970004 0.176470588 0.454545455 0.647058824 11 0 2 15 2R:20827748-20827796 7 11 1242 FBgn0016984 2187.616667 79.33666667 122.04 0.005028303 0.138649637 0.090134382 3 2 2.5 0.15 dme-miR-970-3p 7mer-m8 TCTTATG 2R 21006788 21006794 + 2R_21006788_21006794_+ 0.656853054 0.658025367 0.657439211 0.000828941 CG10543 FBtr0071524|FBtr0332594 21006244|21006244 21007740|21007740 2R + 21006709 21006809 3'utr CG10543 FlyBase G17812.1 ATATGAAGCATATATATTAGGCTAAGCAACTATACAATAATGGCAGACAGACCACAACCACAAGCAACTTTCGAACAAATCTTATGCTTATTTAACATTTA 32 21006790 0.981538828 10 31 244 0.973684211 1.568201724 0.052631579 0.125 0.263157895 32 1 0 37 2R:21006709-21006809 7 CG10543 FBtr0332594|FBtr0071524 21006244|21006244 21007740|21007740 TCTTATG 7mer-m8 dme-miR-970-3p 2R + 21006764 21006833 3'utr CG10543 FlyBase G13554.1 AACCACAAGCAACTTTCGAACAAATCTTATGCTTATTTAACATTTACCATACGAGTTATGAACGCAACGC 11 21006790 0.984034172 6 11 90 1 1.322219295 0 0.636363636 0.80952381 11 0 0 21 2R:21006764-21006833 7 16 1243 FBgn0034570 1491.83 26.02 40.1 0.010725083 0.614911606 0.399002494 -2 -2 -2 0.15 dme-miR-14-3p 6mer3-8 AAGACT 2R 21059772 21059777 + 2R_21059772_21059777_+ 0.972080302 0.86543098 0.918755641 0.075412443 cpa FBtr0071532 21059060 21059883 2R + 21059695 21059793 3'utr cpa FlyBase G17836.1 CCTAGTATGAGCATGAATAATAACTATGCTAAACCACTGATCATTTTTGCCAGCTCTCCATTGACAAACAATAACTAAAGACTTTGATTTTATAAAAAC 83 21059779 0.982072357 10 83 616 1 1.982271233 0.020833333 0.144578313 0.260416667 83 0 0 96 2R:21059695-21059793 6 cpa FBtr0071532 21059060 21059883 AAGACT 6mer3-8 dme-miR-14-3p 2R + 21059729 21059794 3'utr cpa FlyBase G13571.1 CACTGATCATTTTTGCCAGCTCTCCATTGACAAACAATAACTAAAGACTTTGATTTTATAAAAACA 58 21059779 0.982576389 5 58 437 1 1.934498451 0.023255814 0.327586207 0.546511628 58 0 0 86 2R:21059729-21059794 6 65.5 1244 FBgn0034577 1983.766667 126.3666667 193.9 0.033017996 0.518332894 0.337802991 -7 -7 -7 0.15 dme-miR-8-3p 8mer-A1 CAGTATTA 2R 21088057 21088064 + 2R_21088057_21088064_+ 0.666227254 0.667301091 0.666764173 0.000759291 Treh FBtr0071540|FBtr0071538|FBtr0071539|FBtr0071536|FBtr0332423|FBtr0071537 21086953|21086953|21086953|21086953|21086953|21086953 21088226|21088226|21088226|21088226|21088226|21088226 2R + 21087963 21088129 3'utr Treh FlyBase G17844.1 ATTGCTACTCAAGTAGTGTGATTCCCCCCTCCGTGTTTGTGCGTGTGTTGTGAAGTCTGTAGTTGCTAACGTTTTTCGTTGAGTGCGGAGATTGCAGTATTAGTTTATCATTATTTGGTAGTTGAAGTGAGAGTTGTATATACTGAATTTATATGGGCATGCCCGAA 232 21088054 0.898140458 22 228 2040 0.985714286 2.139879086 0.05 0.168103448 0.310714286 232 3 1 276 2R:21087963-21088129 8 Treh FBtr0071536|FBtr0332423|FBtr0071537|FBtr0071540|FBtr0071538|FBtr0071539 21086953|21086953|21086953|21086953|21086953|21086953 21088226|21088226|21088226|21088226|21088226|21088226 CAGTATTA 8mer-A1 dme-miR-8-3p 2R + 21088009 21088138 3'utr Treh FlyBase G13577.1 GTTGTGAAGTCTGTAGTTGCTAACGTTTTTCGTTGAGTGCGGAGATTGCAGTATTAGTTTATCATTATTTGGTAGTTGAAGTGAGAGTTGTATATACTGAATTTATATGGGCATGCCCGAAATTGTTATT 186 21088054 0.900389723 20 181 1678 0.97689769 2.170261715 0.02970297 0.440860215 0.656765677 186 6 1 296 2R:21088009-21088138 8 151.5 1245 FBgn0003748 466.8133333 20.13666667 30.89333333 0.324540859 7.52358881 4.903970652 3 3 3 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 21123786 21123793 - 2R_21123786_21123793_- 0.614130167 0.62298026 0.618555214 0.006257966 CG4050 FBtr0071637|FBtr0071638 21123733|21123733 21124117|21124117 2R - 21123782 21123824 3'utr CG4050 FlyBase G25374.2 ACGTAATTTATATATGAAGGCCTGACGGTCTTGCATTTATTTA 8 21123794 0.968906009 3 6 64 0.75 0.77815125 0.125 0 0 8 2 0 6 2R:21123782-21123824 8 CG4050 FBtr0071637|FBtr0071638 21123733|21123733 21124117|21124117 TGCATTTA 8mer-A1 dme-miR-277-3p 2R - 21123755 21123808 3'utr CG4050 FlyBase G19189.1 AAGGCCTGACGGTCTTGCATTTATTTAAATAACGTTAGGACGTGTACTAAAATA 7 21123794 0.987773602 4 7 62 1 1 0.3 0.428571429 0.6 7 0 0 10 2R:21123755-21123808 8 6 1246 FBgn0020312 364 12.77333333 19.31 0.016483516 0.469728601 0.310719834 1 1 1 0.15 dme-miR-252-5p 7mer-m8 GTACTTA 2R 21123956 21123962 - 2R_21123956_21123962_- 0.588299563 0.588299915 0.588299739 2.12E-07 CG4050 FBtr0071637|FBtr0071638 21123733|21123733 21124117|21124117 2R - 21123896 21124048 3'utr CG4050 FlyBase G25375.1 AAGGTTCCCACATTCTGTGAGACATACGGAGTCTGATAAAAATAACACAAAGTGAAGATATGTGGTCCATTCCACACAATTCCGTTGTACTTATTAGTTATTAACGTAATTCTTTGATCATATACTCGTTTTGAAGATATTTATACAATTTTT 144 21123963 0.758965847 33 134 1291 0.934911243 1.596597096 0.142011834 0.166666667 0.289940828 144 8 3 158 2R:21123896-21124048 7 CG4050 FBtr0071637|FBtr0071638 21123733|21123733 21124117|21124117 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 21123903 21124046 3'utr CG4050 FlyBase G19190.1 GGTTCCCACATTCTGTGAGACATACGGAGTCTGATAAAAATAACACAAAGTGAAGATATGTGGTCCATTCCACACAATTCCGTTGTACTTATTAGTTATTAACGTAATTCTTTGATCATATACTCGTTTTGAAGATATTTATAC 95 21123963 0.772790172 26 90 783 0.957142857 1.826074803 0.221428571 0.347368421 0.557142857 95 5 1 134 2R:21123903-21124046 7 57 1247 FBgn0020312 364 12.77333333 19.31 0.156593407 4.462421712 2.951838426 1 1 1 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 21129646 21129653 - 2R_21129646_21129653_- 0.500102519 0.500113381 0.50010795 7.71E-06 Magi FBtr0071636|FBtr0342874|FBtr0342873 21129461|21129461|21129461 21129874|21129874|21129874 2R - 21129550 21129695 3'utr Magi FlyBase G25389.1 TTCTTAAGATACCGATCATTATCTTAGGCTAAGTTACTGCTTGTACTTAAACGTTAAGACAATTTGCCAGTTTGTGAGATATTAATCACTTAGCTTAAGCTGTTTTAGACATATACGAATTGTACAAATGTAAAGGACTTTAAATT 98 21129654 0.797334114 26 89 797 0.925 1.443262987 0.066666667 0.183673469 0.333333333 98 6 3 111 2R:21129550-21129695 8 Magi FBtr0071636|FBtr0342874|FBtr0342873 21129461|21129461|21129461 21129874|21129874|21129874 GTACTTAA 8mer-A1 dme-miR-252-5p 2R - 21129526 21129690 3'utr Magi FlyBase G19200.1 AAGATACCGATCATTATCTTAGGCTAAGTTACTGCTTGTACTTAAACGTTAAGACAATTTGCCAGTTTGTGAGATATTAATCACTTAGCTTAAGCTGTTTTAGACATATACGAATTGTACAAATGTAAAGGACTTTAAATTTTTATCTCGAGTATGTATATTATT 92 21129654 0.988612359 24 84 787 0.923076923 1.51851394 0.13986014 0.391304348 0.608391608 92 8 3 132 2R:21129526-21129690 8 43.5 1248 FBgn0034590 938.3433333 22.88 35.01 0.046358298 1.901223776 1.242502142 1 1 1 0.15 dme-miR-14-3p 8mer-A1 AAGACTGA 2R 21129768 21129775 - 2R_21129768_21129775_- 0.32993083 0.438310709 0.384120769 0.076636162 Magi FBtr0071636|FBtr0342874|FBtr0342873 21129461|21129461|21129461 21129874|21129874|21129874 2R - 21129725 21129892 stop_codon Magi FlyBase G25390.1 CAGCAGCCACAATTATGACTCTGAGACCTACGCATTCGGCTCTATAAGAGCTTTCTATAGTGTTGCATCGCCTGCAGGCCCTTAGTTTGTACTTTCGTTAGCAAAGTACTCACCCCAAAGACTGAATTTAGTAGCATATGTAAGCCAAACCCTTTGCAAGTCTCAAAA 125 21129766 0.974034658 20 115 711 0.923611111 1.822821645 0.118055556 0.128 0.243055556 125 10 1 133 2R:21129725-21129892 8 Magi FBtr0071636|FBtr0342874|FBtr0342873 21129461|21129461|21129461 21129874|21129874|21129874 AAGACTGA 8mer-A1 dme-miR-14-3p 2R - 21129725 21129838 3'utr Magi FlyBase G19201.1 CTATAGTGTTGCATCGCCTGCAGGCCCTTAGTTTGTACTTTCGTTAGCAAAGTACTCACCCCAAAGACTGAATTTAGTAGCATATGTAAGCCAAACCCTTTGCAAGTCTCAAAA 89 21129765 0.972189483 20 81 505 0.902255639 2.079181246 0.082706767 0.348314607 0.563909774 89 13 0 120 2R:21129725-21129838 8 75 1249 FBgn0034590 938.3433333 22.88 35.01 0.0799281 3.277972028 2.142245073 -9 -10 -9.5 0.15 dme-bantam-3p 6mer3-8 TGATCT 2R 21145453 21145458 + 2R_21145453_21145458_+ 0.996046991 0.998264747 0.997155869 0.001568151 Xbp1 FBtr0310044 21144863 21145750 2R + 21145285 21145523 stop_codon Xbp1 FlyBase G17860.1 AGGCGATCTCCCCGTTGGCCAAATCCCCCGCATTGTCTCTACACTCGGCCACCTCGGACCATGGATACGAGTCCATACTGGGCTCTCCCACATCCGTGGCTCTCACTCTGCCCGCAGATGAGGACGATTTCCCCTGGGAGAGCAACTTTGACGAGCTGTTTCCCAGTTTGATCTGAGTTTTTCAAGCTGAAAACTTCGTTCTGTCTCTCTTTTATTGTTAAGTTTGGCCGGCCGCCGTT 201 21145452 0.90449879 44 195 1596 0.976284585 1.790636962 0.134387352 0.208955224 0.371541502 201 3 3 247 2R:21145285-21145523 6 Xbp1 FBtr0310044 21144863 21145750 TGATCT 6mer3-8 dme-bantam-3p 2R + 21145374 21145473 stop_codon Xbp1 FlyBase G13597.1 ACATCCGTGGCTCTCACTCTGCCCGCAGATGAGGACGATTTCCCCTGGGAGAGCAACTTTGACGAGCTGTTTCCCAGTTTGATCTGAGTTTTTCAAGCTG 79 21145452 0.858162389 16 66 450 0.956896552 1.744292983 0.224137931 0.358974359 0.568965517 78 4 1 111 2R:21145374-21145473 6 44.5 1250 FBgn0021872 6665.376667 377.2933333 573.4833333 0.006676292 0.117945365 0.077595978 1 1 1 0.15 dme-miR-1012-3p 8mer-A1 TTGACTAA 2R 21145710 21145717 + 2R_21145710_21145717_+ 0.609492553 0.610469238 0.609980896 0.00069056 Xbp1 FBtr0310044|FBtr0310045 21144863|21145459 21145750|21145750 2R + 21145608 21145741 3'utr Xbp1 FlyBase G17861.2 TAGCTGTAGGTTTCCATTTATATTTAACAATCTCTAACCACATAGGCTTATGATTACTCTTATATGTATGTATTGTGCTCAAAGAATTTGAAAAAAAAACATTTGACTAAAAAATATTCAAAATATAAACCAAA 429 21145709 0.846178406 28 409 2740 0.960784314 2.088136089 0.145098039 0.153846154 0.288235294 429 17 3 490 2R:21145608-21145741 8 Xbp1 FBtr0310044|FBtr0310045 21144863|21145459 21145750|21145750 TTGACTAA 8mer-A1 dme-miR-1012-3p 2R + 21145623 21145748 3'utr Xbp1 FlyBase G13598.2 ATTTATATTTAACAATCTCTAACCACATAGGCTTATGATTACTCTTATATGTATGTATTGTGCTCAAAGAATTTGAAAAAAAAACATTTGACTAAAAAATATTCAAAATATAAACCAAACCAAACA 254 21145709 0.967857902 28 241 1539 0.96 1.681241237 0.105714286 0.279527559 0.477142857 254 8 6 336 2R:21145623-21145748 8 183 1251 FBgn0021872 6665.376667 377.2933333 573.4833333 0.027455313 0.485033749 0.31910256 1 1 1 0.15 dme-miR-276a-3p 7mer-A1 GTTCCTA 2R 21148379 21148385 - 2R_21148379_21148385_- 0.817914904 0.820773572 0.819344238 0.002021406 CG30389 FBtr0310423 21148263 21149340 2R - 21148373 21148404 3'utr CG30389 FlyBase G25405.1 ATTTTTGTTTAGTTCTGCTGTTCCTAAGAAAC 13 21148386 0.740578779 3 13 115 1 1.113943352 0.230769231 0 0 13 0 0 13 2R:21148373-21148404 7 CG30389 FBtr0310423 21148263 21149340 GTTCCTA 7mer-A1 dme-miR-276a-3p 2R - 21148368 21148400 3'utr CG30389 FlyBase G19216.1 TTGTTTAGTTCTGCTGTTCCTAAGAAACAAAAA 11 21148386 0.962646018 2 8 75 0.588235294 0.698970004 0 0.363636364 0.588235294 11 6 1 10 2R:21148368-21148400 7 12 1252 FBgn0050389 2516.626667 66.38 102.5 0.004768288 0.180777343 0.117073171 1 1 1 0.15 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2R 21148537 21148542 - 2R_21148537_21148542_- 0.999998228 1 0.999999114 1.27E-06 CG30389 FBtr0310423 21148263 21149340 2R - 21148461 21148587 3'utr CG30389 FlyBase G25406.1 TTTGCACGACCTCTGCCTCTTGCCCAACGATTCAATGGAATATTTTTGAAGTCTGCGCCCTTGATTTATTATCTCATTAAATTATTTTTGTTATAAAACCTTAAATGTATGCTATAATTTAGAACCT 52 21148521 0.824957765 14 45 466 0.867647059 1.293730757 0.25 0.269230769 0.441176471 52 7 2 59 2R:21148461-21148587 6 CG30389 FBtr0310423 21148263 21149340 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2R - 21148498 21148581 3'utr CG30389 FlyBase G19217.1 CGACCTCTGCCTCTTGCCCAACGATTCAATGGAATATTTTTGAAGTCTGCGCCCTTGATTTATTATCTCATTAAATTATTTTTG 33 21148535 0.801786664 18 32 303 0.98 1.69019608 0.22 0.393939394 0.6 33 1 0 49 2R:21148498-21148581 6 23 1253 FBgn0050389 2516.626667 66.38 102.5 0.009139218 0.346489907 0.224390244 -21 -7 -14 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 21148649 21148654 - 2R_21148649_21148654_- 0.981232232 0.730283828 0.85575803 0.177447315 CG30389 FBtr0310423 21148263 21149340 2R - 21148613 21148705 3'utr CG30389 FlyBase G25407.1 AAGCCAAGGAAGTACCCCCCAAAATCCTATGTAAAATGTTTTCTATTTTTTACCAAACGCTGTGACAGAGTTGGACCAACCGAAGTGATGGCC 22 21148656 0.999947989 9 20 133 0.916666667 1.342422681 0 0.090909091 0.166666667 22 2 0 22 2R:21148613-21148705 6 CG30389 FBtr0310423 21148263 21149340 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 21148599 21148661 3'utr CG30389 FlyBase G19218.1 ATTTTTTACCAAACGCTGTGACAGAGTTGGACCAACCGAAGTGATGGCCATGATCTTGGGGAG 15 21148656 0.97120576 7 13 74 0.869565217 1.301029996 0 0.533333333 0.695652174 15 3 0 20 2R:21148599-21148661 6 13 1254 FBgn0050389 2516.626667 66.38 102.5 0.005165645 0.195842121 0.126829268 2 2 2 0.15 dme-miR-304-5p 8mer-A1 TGAGATTA 2R 21149249 21149256 - 2R_21149249_21149256_- 0.625308699 0.625330066 0.625319383 1.51E-05 CG30389 FBtr0310423|FBtr0071632|FBtr0071633|FBtr0330235 21148263|21148731|21148731|21148731 21149340|21149340|21149340|21149340 2R - 21149238 21149283 stop_codon CG30389 FlyBase G25409.1 TCGCACATGCATCTGCGACGACAAGTTTGAGATTATTATACTTTAT 65 21149257 0.780796593 3 63 489 0.958333333 1.537819095 0.347222222 0.107692308 0.194444444 65 2 1 69 2R:21149238-21149283 8 CG30389 FBtr0310423|FBtr0330235|FBtr0071633|FBtr0071632 21148263|21148731|21148731|21148731 21149340|21149340|21149340|21149340 TGAGATTA 8mer-A1 dme-miR-304-5p 2R - 21149238 21149284 stop_codon CG30389 FlyBase G19221.1 CTCGCACATGCATCTGCGACGACAAGTTTGAGATTATTATACTTTAT 34 21149257 0.769324624 4 33 253 0.981132075 1.716003344 0.471698113 0.411764706 0.622641509 34 1 0 52 2R:21149238-21149284 8 49.5 1255 FBgn0050389 2516.626667 66.38 102.5 0.019669187 0.745706538 0.482926829 1 1 1 0.15 dme-miR-304-5p 8mer-A1 TGAGATTA 2R 21162115 21162122 - 2R_21162115_21162122_- 0.623923399 0.624345056 0.624134227 0.000298187 CG4266 FBtr0342871|FBtr0113100|FBtr0310422|FBtr0071629 21161711|21161711|21161711|21161711 21162255|21162255|21164953|21162255 2R - 21162065 21162160 3'utr CG4266 FlyBase G25426.1 GTAACTCCATACATGCGAACATTTTACCGTTTTTAAATTGAGATTACGTAGCATTTTTGACGAGGGGGGTGGGGGTTGAACCGGACGCTTTTAAAA 23 21162123 0.986398093 6 22 182 0.961538462 1.397940009 0.192307692 0.130434783 0.230769231 23 1 0 25 2R:21162065-21162160 8 CG4266 FBtr0310422|FBtr0071629|FBtr0342871|FBtr0113100 21161711|21161711|21161711|21161711 21164953|21162255|21162255|21162255 TGAGATTA 8mer-A1 dme-miR-304-5p 2R - 21162106 21162140 3'utr CG4266 FlyBase G19232.1 ATTTTACCGTTTTTAAATTGAGATTACGTAGCATT 6 21162123 0.819123942 2 6 61 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 2R:21162106-21162140 8 10.5 1256 FBgn0034598 911.3333333 25.02 38.24333333 0.01152158 0.419664269 0.274557657 1 1 1 0.15 dme-miR-14-3p 6mer3-8 AAGACT 2R 21162660 21162665 - 2R_21162660_21162665_- 0.768000671 0.740195022 0.754097846 0.019661599 CG4266 FBtr0310422 21161711 21164953 2R - 21162636 21162699 3'utr CG4266 FlyBase G25428.1 GTGGACACCGAGGAGGATTGGGATCAGGAACTTCAAGACTATGAGGCGAGAATGGAGGCCCAGA 55 21162658 0.924243743 5 53 187 0.983870968 1.785329835 0.161290323 0.127272727 0.225806452 55 1 0 61 2R:21162636-21162699 6 CG4266 FBtr0310422 21161711 21164953 AAGACT 6mer3-8 dme-miR-14-3p 2R - 21162633 21162696 3'utr CG4266 FlyBase G19234.1 GACACCGAGGAGGATTGGGATCAGGAACTTCAAGACTATGAGGCGAGAATGGAGGCCCAGAAGC 38 21162658 0.909998636 4 37 121 0.983333333 1.770852012 0.266666667 0.394736842 0.616666667 38 1 0 59 2R:21162633-21162696 6 44.5 1257 FBgn0034598 911.3333333 25.02 38.24333333 0.048829554 1.778577138 1.163601499 -7 -7 -7 0.15 dme-miR-277-3p 6mer3-8 TGCATT 2R 21169989 21169994 - 2R_21169989_21169994_- 0.881279381 0.922548189 0.901913785 0.029181448 LSm1 FBtr0071628 21169967 21170064 2R - 21169976 21170009 3'utr LSm1 FlyBase G25437.1 TTTGTATATTTGTACTGCATTAAAAAACTATGTT 22 21169999 0.68222221 5 22 204 1 1.431363764 0 0.227272727 0.37037037 22 0 0 27 2R:21169976-21170009 6 LSm1 FBtr0071628 21169967 21170064 TGCATT 6mer3-8 dme-miR-277-3p 2R - 21169969 21170012 3'utr LSm1 FlyBase G19241.1 CTCTTTGTATATTTGTACTGCATTAAAAAACTATGTTAAAACCT 9 21170000 0.989505528 5 9 86 1 1.079181246 0 0.333333333 0.5 9 0 0 12 2R:21169969-21170012 6 15.5 1258 FBgn0261067 205 46.4 71.04 0.075609756 0.334051724 0.218186937 5 6 5.5 0.15 dme-miR-33-5p 6mer2-7 AATGCA 2R 21169989 21169994 + 2R_21169989_21169994_+ 0.972362791 0.958617009 0.9654899 0.009719748 hng1 FBtr0071575 21169943 21170010 2R + 21169969 21170006 3'utr hng1 FlyBase G17876.1 AGGTTTTAACATAGTTTTTTAATGCAGTACAAATATAC 23 21169991 0.821629737 6 20 211 0.807692308 1.322219295 0 0.130434783 0.230769231 23 5 0 21 2R:21169969-21170006 6 hng1 FBtr0071575 21169943 21170010 AATGCA 6mer2-7 dme-miR-33-5p 2R + 21169969 21170007 3'utr hng1 FlyBase G13608.1 AGGTTTTAACATAGTTTTTTAATGCAGTACAAATATACA 18 21169991 0.833590818 3 17 178 0.952380952 1.301029996 0.142857143 0.111111111 0.238095238 18 1 0 20 2R:21169969-21170007 6 19 1259 FBgn0034599 146 16.78333333 25.62333333 0.130136986 1.132075472 0.741511643 -2 -2 -2 0.15 dme-miR-34-5p 6mer2-7 ACTGCC 2R 21174115 21174120 + 2R_21174115_21174120_+ 0.974502551 0.999842445 0.987172498 0.017917944 Xpd FBtr0071576 21174077 21174504 2R + 21174088 21174138 3'utr Xpd FlyBase G17887.1 GGTGCTCTGCCAACCGGCTCTTTGTCGACTGCCTTCCGGGAATAACTCAAC 11 21174121 0.779960928 3 11 75 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 2R:21174088-21174138 6 Xpd FBtr0071576 21174077 21174504 ACTGCC 6mer2-7 dme-miR-34-5p 2R + 21174082 21174134 3'utr Xpd FlyBase G13614.1 GTGGAAGGTGCTCTGCCAACCGGCTCTTTGTCGACTGCCTTCCGGGAATAACT 11 21174121 0.714868072 4 11 82 1 1.113943352 0.230769231 0.181818182 0.307692308 11 0 0 13 2R:21174082-21174134 6 10.5 1260 FBgn0261850 258.9866667 11.14666667 16.99 0.040542628 0.941985646 0.618010594 -6 -6 -6 0.15 dme-miR-317-5p 6mer3-8 GTATCC 2R 21174398 21174403 + 2R_21174398_21174403_+ 0.965541961 0.96968021 0.967611086 0.002926149 Xpd FBtr0071576 21174077 21174504 2R + 21174380 21174407 3'utr Xpd FlyBase G17889.1 GTATCTATACCTGTGATTGTATCCGGAT 11 21174397 0.694988051 5 11 95 1 1.079181246 0 0.090909091 0.166666667 11 0 0 12 2R:21174380-21174407 6 Xpd FBtr0071576 21174077 21174504 GTATCC 6mer3-8 dme-miR-317-5p 2R + 21174354 21174402 3'utr Xpd FlyBase G13615.1 CGAGTTTTGCTCTTGCAGTTGTATTTGTATCTATACCTGTGATTGTATC 12 21174397 0.987362668 5 12 104 1 1.414973348 0 0.583333333 0.807692308 12 0 0 26 2R:21174354-21174402 5 11 1261 FBgn0261850 258.9866667 11.14666667 16.99 0.042473229 0.986842105 0.64743967 1 1 1 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 2R 21192178 21192184 + 2R_21192178_21192184_+ 0.519740038 0.519793888 0.519766963 3.81E-05 tud FBtr0342870|FBtr0071582 21192125|21192125 21192913|21192913 2R + 21192066 21192379 stop_codon tud FlyBase G17941.1 TGTCGTACGACTCTTCTACCAGAGCAAGAACATCAGCGAGAAGCTTCAGGAATGTCAGTGATCACCCCGTTGTACAGTCAGATCGGACTCATATGTGCTCCATGCAGGAGATTGTGATTGGGTTGGCTAAAAACATGCGATGTATTATCCATTAAGTTGAACGAGTTAAACTTATTCAAAGGGAAGAGGAGGACACCACACGATTAGCCAAGATGCTTCATTGACTTTTCATGGAAAACCAAAATGAAAGCAATTTTTAATATTAATTAAAGAATCAATACGGAATGCAAAACATTATCACCAAAAACACAACA 474 21192184 0.980054934 35 459 3211 0.970017637 1.837272703 0.276895944 0.160337553 0.298059965 474 10 7 550 2R:21192066-21192379 7 tud FBtr0342870|FBtr0071582 21192125|21192125 21192913|21192913 TGTGATT 7mer-m1 dme-miR-308-3p 2R + 21192096 21192227 stop_codon tud FlyBase G13660.1 CATCAGCGAGAAGCTTCAGGAATGTCAGTGATCACCCCGTTGTACAGTCAGATCGGACTCATATGTGCTCCATGCAGGAGATTGTGATTGGGTTGGCTAAAAACATGCGATGTATTATCCATTAAGTTGAAC 275 21192184 0.983545622 23 256 1974 0.932400932 1.397940009 0.282051282 0.392727273 0.610722611 275 14 15 400 2R:21192096-21192227 7 293 1262 FBgn0003891 6434.526667 87.37 133.74 0.045535595 3.353553851 2.190818005 -6 -6 -6 0.15 dme-miR-8-3p 8mer-A1 CAGTATTA 2R 21309176 21309183 + 2R_21309176_21309183_+ 0.6711593 0.67169648 0.67142789 0.000379858 CG42672 FBtr0302702|FBtr0302703|FBtr0302704|FBtr0344188 21308996|21308996|21308996|21308996 21309434|21309434|21309434|21309434 2R + 21309134 21309187 3'utr CG42672 FlyBase G17967.1 CGATTTCTCGTATTACTTGTTTTATTCTTGCTTTGTCATGGTCAGTATTATTGA 15 21309175 0.990778344 6 14 150 0.947368421 0.954242509 0.368421053 0.266666667 0.421052632 15 0 1 18 2R:21309134-21309187 8 CG42672 FBtr0344188|FBtr0302704|FBtr0302703|FBtr0302702 21308996|21308996|21308996|21308996 21309434|21309434|21309434|21309434 CAGTATTA 8mer-A1 dme-miR-8-3p 2R + 21309127 21309188 3'utr CG42672 FlyBase G13682.1 CGAAACACGATTTCTCGTATTACTTGTTTTATTCTTGCTTTGTCATGGTCAGTATTATTGAC 16 21309175 0.993024053 7 14 169 0.826086957 1.278753601 0.347826087 0.4375 0.608695652 16 4 0 19 2R:21309127-21309188 8 14 1263 FBgn0261554 652.3633333 14.67 22.79 0.021460434 0.954328562 0.61430452 1 1 1 0.15 dme-miR-12-5p 8mer-A1 AATACTCA 2R 21319412 21319419 + 2R_21319412_21319419_+ 0.630572003 0.616357298 0.62346465 0.010051311 CG9485 FBtr0310327|FBtr0071599|FBtr0071601|FBtr0300395|FBtr0300394|FBtr0071600 21319401|21319401|21319401|21319401|21319401|21319401 21319569|21319569|21319569|21319569|21319569|21319569 2R + 21319403 21319445 3'utr CG9485 FlyBase G17973.1 ACCACCGTAAATACTCATATTCAAACCTGTTAGTTGCTACCAA 17 21319432 0.921745471 9 16 121 0.952380952 1.301029996 0.19047619 0.176470588 0.333333333 17 1 0 20 2R:21319403-21319445 8 CG9485 FBtr0300394|FBtr0071600|FBtr0071601|FBtr0300395|FBtr0310327|FBtr0071599 21319401|21319401|21319401|21319401|21319401|21319401 21319569|21319569|21319569|21319569|21319569|21319569 AATACTCA 8mer-A1 dme-miR-12-5p 2R + 21319402 21319444 3'utr CG9485 FlyBase G13685.1 AACCACCGTAAATACTCATATTCAAACCTGTTAGTTGCTACCA 7 21319433 0.983928252 5 7 53 1 0.903089987 0 0.142857143 0.25 7 0 0 8 2R:21319402-21319444 8 9.5 1264 FBgn0034618 1036.04 24.30333333 37.13 0.00916953 0.390892882 0.255857797 -20 -21 -20.5 0.15 dme-miR-14-3p 6mer2-7 AGACTG 2R 21336209 21336214 + 2R_21336209_21336214_+ 0.999919635 0.999985433 0.999952534 4.65E-05 dom FBtr0071604 21336064 21336986 2R + 21335998 21336277 stop_codon dom FlyBase G18016.1 CTAGCTCATCAGCAGCAGTCAGTGGTGTTTCGGGAGGAAATGCCTCCTCGAGCGGAACAGCCAGGTGATGATGTTCACTATCATACCTCAGTCAGTATTATCAGCTGTGTGTGTTGTGTGCGTTTTAGTGGGCGACTAATTATCTGTGGGGAGACGGGTCCTTCCCCGGCTGTTACTGCTGCCAGGCGACTGATGCATAATGAGTATTTATAGACTGTAACAAGTTTCCTTCTATCGTATGAGATAAGTTAGTTAGGCGCCGGAACCCACGCTAGAATCT 341 21336207 0.983059955 42 324 2466 0.955607477 2.310693312 0.119158879 0.211143695 0.371495327 341 18 1 409 2R:21335998-21336277 6 dom FBtr0071604 21336064 21336986 AGACTG 6mer2-7 dme-miR-14-3p 2R + 21336123 21336299 3'utr dom FlyBase G13724.2 TAGTGGGCGACTAATTATCTGTGGGGAGACGGGTCCTTCCCCGGCTGTTACTGCTGCCAGGCGACTGATGCATAATGAGTATTTATAGACTGTAACAAGTTTCCTTCTATCGTATGAGATAAGTTAGTTAGGCGCCGGAACCCACGCTAGAATCTAGAATAACAAATTAAACTTCAT 176 21336207 0.888485132 26 162 1215 0.922509225 1.795880017 0.084870849 0.392045455 0.605166052 176 18 3 250 2R:21336123-21336299 6 193 1265 FBgn0020306 6085.363333 78.23 120.3133333 0.031715444 2.467084239 1.604144733 2 2 2 0.15 dme-miR-1012-3p 8mer-A1 TTGACTAA 2R 21336851 21336858 + 2R_21336851_21336858_+ 0.624865784 0.531321688 0.578093736 0.066145667 dom FBtr0071604 21336064 21336986 2R + 21336814 21336877 3'utr dom FlyBase G18019.1 AATGGAACATTAACAATCTAAAGACTATGAGCATAGATTGACTAACCAATAAGACACAGAACTC 29 21336842 0.692505155 5 25 139 0.921052632 1.544068044 0.315789474 0.310344828 0.473684211 29 3 0 35 2R:21336814-21336877 8 dom FBtr0071604 21336064 21336986 TTGACTAA 8mer-A1 dme-miR-1012-3p 2R + 21336791 21336877 3'utr dom FlyBase G13725.1 AATTTATTTTGTACTCTAACCTAAATGGAACATTAACAATCTAAAGACTATGAGCATAGATTGACTAACCAATAAGACACAGAACTC 24 21336841 0.965206843 6 22 124 0.942857143 1.51851394 0.142857143 0.333333333 0.542857143 24 2 0 33 2R:21336791-21336877 8 16 1266 FBgn0020306 6085.363333 78.23 120.3133333 0.00262926 0.204525118 0.132986092 9 10 9.5 0.15 dme-bantam-3p 8mer-A1 TGATCTCA 2R 21341389 21341396 + 2R_21341389_21341396_+ 0.630597682 0.630841121 0.630719401 0.00017211 dom FBtr0342890|FBtr0071603 21341126|21341126 21341847|21341847 2R + 21341362 21341655 stop_codon dom FlyBase G18032.2 CAGTCAATCAGCCCGTCATTGCTAAATTGATCTCAATTTCTGTCGATTGGTTTTGCAGCCATGAGCGATCTAACTGTTCTGGAGGATTGTGAGCTCAAGGTGAAACGCTGAAGATTACAACGATGATCGCTTCAATCAGCTCAAGGCATGGAAGCCGTATTACTAATTTTACTGATCCTTAGATATAGCACCTTAGCTTAAGTGAAATTTCATTGTATCTATTCATATTACGAGAATAGTTTTAAGGAAGTGTAGGTGGAGTGCCTAGTGTGTAGGCTAACTGCTTTAAATTCA 265 21341388 0.877750261 45 254 2351 0.957928803 1.994170456 0.090614887 0.15530303 0.278317152 264 11 2 296 2R:21341362-21341655 8 dom FBtr0071603|FBtr0342890 21341126|21341126 21341847|21341847 TGATCTCA 8mer-A1 dme-bantam-3p 2R + 21341348 21341497 stop_codon dom FlyBase G13736.1 ATCAGTCAGTCAGTCAGTCAATCAGCCCGTCATTGCTAAATTGATCTCAATTTCTGTCGATTGGTTTTGCAGCCATGAGCGATCTAACTGTTCTGGAGGATTGTGAGCTCAAGGTGAAACGCTGAAGATTACAACGATGATCGCTTCAAT 173 21341388 0.989425342 18 160 1550 0.921259843 2.369215857 0.062992126 0.323699422 0.539370079 173 20 0 234 2R:21341348-21341497 8 179 1267 FBgn0020306 6085.363333 78.23 120.3133333 0.029414842 2.28812476 1.487781903 1 1 1 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2R 21341789 21341794 + 2R_21341789_21341794_+ 0.999999993 0.999734801 0.999867397 0.000187525 dom FBtr0342890|FBtr0071602|FBtr0071603 21341126|21341424|21341126 21341847|21341847|21341847 2R + 21341691 21341799 3'utr dom FlyBase G18033.1 CTATTCCCGTAGAGCAGTATGTACATTGGTAAATCTAATTCAGATCTATCAGATACTACATAAACACACCTAATATGTAGCTATAACTAAATGTCCTTTCTAGTTGTAT 19 21341787 0.986855854 9 17 154 0.913043478 1.322219295 0.173913043 0.210526316 0.347826087 19 2 0 21 2R:21341691-21341799 6 dom FBtr0071603|FBtr0342890|FBtr0071602 21341126|21341126|21341424 21341847|21341847|21341847 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 21341698 21341799 3'utr dom FlyBase G13738.1 CGTAGAGCAGTATGTACATTGGTAAATCTAATTCAGATCTATCAGATACTACATAAACACACCTAATATGTAGCTATAACTAAATGTCCTTTCTAGTTGTAT 15 21341788 0.988854569 8 14 131 0.944444444 1.230448921 0.333333333 0.2 0.333333333 15 1 0 17 2R:21341698-21341799 6 7 1268 FBgn0020306 6085.363333 78.23 120.3133333 0.001150301 0.089479739 0.058181415 2 1 1.5 0.15 dme-miR-1002-5p 6mer3-8 CTACTT 2R 21355075 21355080 - 2R_21355075_21355080_- 0.895119101 0.946596437 0.920857769 0.036399948 cv-2 FBtr0071610 21355013 21356005 2R - 21355048 21355096 3'utr cv-2 FlyBase G25470.1 AATAACTCTTTATATACTACTTGTATGGCTGGAACTGTAAGTTTACGAT 5 21355082 0.987447398 4 5 50 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2R:21355048-21355096 6 cv-2 FBtr0071610 21355013 21356005 CTACTT 6mer3-8 dme-miR-1002-5p 2R - 21355058 21355082 3'utr cv-2 FlyBase G19262.1 TACTACTTGTATGGCTGGAACTGTA 5 21355075 0.634511094 2 3 34 0.555555556 0.698970004 0 0.6 0.777777778 5 4 0 5 2R:21355058-21355082 6 5 1269 FBgn0000395 482.9966667 13.41666667 20.45666667 0.010352038 0.372670807 0.244419097 2 -5 -1.5 0.15 dme-miR-263a-5p 7mer-m1 TGCCATT 2R 21355152 21355158 - 2R_21355152_21355158_- 0.765546692 0.760943564 0.763245128 0.003254883 cv-2 FBtr0071610 21355013 21356005 2R - 21355135 21355203 3'utr cv-2 FlyBase G25471.1 CAGCTAATTATGCACCTAACCGGCGGAAAGGAGGAGTCAGCTCTTTGCCATTTTTCGATTCTACAAATT 8 21355152 0.966570076 6 8 47 1 0.903089987 0 0 0 8 0 0 8 2R:21355135-21355203 7 cv-2 FBtr0071610 21355013 21356005 TGCCATT 7mer-m1 dme-miR-263a-5p 2R - 21355152 21355183 3'utr cv-2 FlyBase G19263.1 CGGCGGAAAGGAGGAGTCAGCTCTTTGCCATT 6 21355159 0.975610347 2 4 27 0.625 0.698970004 0.25 0.333333333 0.5 6 3 0 5 2R:21355152-21355183 6 4.5 1270 FBgn0000395 482.9966667 13.41666667 20.45666667 0.009316834 0.335403727 0.219977188 -6 1 -2.5 0.15 dme-miR-970-3p 7mer-A1 CTTATGA 2R 21383486 21383492 - 2R_21383486_21383492_- 0.822763796 0.586300109 0.704531952 0.167205086 CG10795 FBtr0071609 21383225 21383560 2R - 21383447 21383507 3'utr CG10795 FlyBase G25482.1 ATACCTTAAGTACGGCTTATGACACTAACGATAAGCAACGACTGCGGATCCGTTCCGATCG 29 21383507 0.866713292 7 10 112 0.766666667 1.06069784 0.2 0.153846154 0.266666667 26 6 1 23 2R:21383447-21383507 7 CG10795 FBtr0071609 21383225 21383560 CTTATGA 7mer-A1 dme-miR-970-3p 2R - 21383448 21383523 3'utr CG10795 FlyBase G19270.1 ACTTTAAGTCCTTGTTATACCTTAAGTACGGCTTATGACACTAACGATAAGCAACGACTGCGGATCCGTTCCGATC 14 21383507 0.791009166 10 11 86 0.772727273 0.62838893 0.181818182 0.5 0.681818182 14 2 3 17 2R:21383448-21383523 7 7 1271 FBgn0034626 77 8.706666667 13.28666667 0.090909091 0.803981623 0.526843954 15 15 15 0.15 dme-miR-999-3p 7mer-m8 AGTTAAC 2R 21486857 21486863 + 2R_21486857_21486863_+ 0.674514267 0.674514265 0.674514266 0 Sara FBtr0071641 21486704 21487107 2R + 21486826 21486905 3'utr Sara FlyBase G18067.1 ATGAGGACATGTTGGTATTGTTGGATGGCTCAGTTAACTGTGTATATATTTAAGTAGCTCATCGTTTGGTTTTTGTCTAT 33 21486860 0.648207506 17 30 342 0.918918919 1.531478917 0.162162162 0.121212121 0.216216216 33 3 0 34 2R:21486826-21486905 7 Sara FBtr0071641 21486704 21487107 AGTTAAC 7mer-m8 dme-miR-999-3p 2R + 21486808 21486909 3'utr Sara FlyBase G13761.1 GAGTCCATGGGGCAAGAAATGAGGACATGTTGGTATTGTTGGATGGCTCAGTTAACTGTGTATATATTTAAGTAGCTCATCGTTTGGTTTTTGTCTATACAT 15 21486837 0.988138844 11 15 141 1 1.361727836 0.217391304 0.4 0.608695652 15 0 0 23 2R:21486808-21486909 7 10.5 1272 FBgn0026369 1340.356667 34.97 53.53333333 0.007833736 0.300257363 0.196139477 -3 20 8.5 0.15 dme-miR-11-3p 7mer-m1 TGTGATG 2R 21487034 21487040 + 2R_21487034_21487040_+ 0.535581506 0.535593529 0.535587518 8.49E-06 Sara FBtr0071641 21486704 21487107 2R + 21486991 21487082 3'utr Sara FlyBase G18069.1 AAGTAAAACGTATCTAAGAAACCTAAATATATATATATTTGTATGTGATGTTCTTTAATATGCTTTACACATTTACCACTCGAGTATATATG 26 21487031 0.994925881 9 22 300 0.9 0.954242509 0.066666667 0.153846154 0.266666667 26 1 2 27 2R:21486991-21487082 7 Sara FBtr0071641 21486704 21487107 TGTGATG 7mer-m1 dme-miR-11-3p 2R + 21487007 21487083 3'utr Sara FlyBase G13762.1 AGAAACCTAAATATATATATATTTGTATGTGATGTTCTTTAATATGCTTTACACATTTACCACTCGAGTATATATGA 18 21487030 0.992858473 9 16 210 0.821428571 0.884606581 0.178571429 0.388888889 0.607142857 18 3 2 23 2R:21487007-21487083 7 18 1273 FBgn0026369 1340.356667 34.97 53.53333333 0.013429261 0.514726909 0.336239103 3 4 3.5 0.15 dme-miR-2a-2-5p 7mer-m1 GATGAGG 2R 21487554 21487560 - 2R_21487554_21487560_- 0.811920996 0.809064206 0.810492601 0.002020063 Fkbp14 FBtr0300397|FBtr0342897|FBtr0342896|FBtr0071703|FBtr0306013 21487165|21487165|21487165|21487165|21487165 21487665|21487665|21487665|21487665|21487665 2R - 21487442 21487581 3'utr Fkbp14 FlyBase G25505.1 AAAAATAGAACATATACAACAGATGAGGCACGAGCCGAGCAATAAATCGAGTGCAACCAAATGCTTCCCGATGTCATTTTGTATATAGCATACATATCAGCATCAGCATCAGCATCTGCATCTGCATCTAAACACCAACA 121 21487558 0.993367532 14 119 293 0.993197279 2.164352856 0.013605442 0.181818182 0.326530612 121 1 0 146 2R:21487442-21487581 7 Fkbp14 FBtr0071703|FBtr0306013|FBtr0342897|FBtr0342896|FBtr0300397 21487165|21487165|21487165|21487165|21487165 21487665|21487665|21487665|21487665|21487665 GATGAGG 7mer-m1 dme-miR-2a-2-5p 2R - 21487459 21487581 3'utr Fkbp14 FlyBase G19288.1 AAAAATAGAACATATACAACAGATGAGGCACGAGCCGAGCAATAAATCGAGTGCAACCAAATGCTTCCCGATGTCATTTTGTATATAGCATACATATCAGCATCAGCATCAGCATCTGCATCT 58 21487558 0.982340569 8 53 142 0.923913043 1.452297671 0 0.413793103 0.630434783 58 5 2 85 2R:21487459-21487581 7 68 1274 FBgn0010470 1256.333333 117.3933333 179.62 0.054125763 0.579249248 0.378576996 -2 -2 -2 0.15 dme-miR-92b-3p 6mer3-8 GTGCAA 2R 21512684 21512689 + 2R_21512684_21512689_+ 0.999313662 0.998928168 0.999120915 0.00027259 MESK2 FBtr0089710|FBtr0089703 21512447|21512447 21512725|21512725 2R + 21512570 21512706 3'utr MESK2 FlyBase G18084.1 ACGCACACACAAAGTACACAAACGTCCCTGACCCAACCTGATTTTAGTCTAAACGAAAATCTTTGAGAATCAAAAGCTTTTTGAGATGCATTGAAACGAAACCAAAAATCTATTGTGCAAAATTTTATATTTACAAA 125 21512682 0.957945587 18 121 707 0.972413793 2.149219113 0.034482759 0.128 0.248275862 125 4 0 141 2R:21512570-21512706 6 MESK2 FBtr0089703|FBtr0089710 21512447|21512447 21512725|21512725 GTGCAA 6mer3-8 dme-miR-92b-3p 2R + 21512575 21512706 3'utr MESK2 FlyBase G13772.1 CACACAAAGTACACAAACGTCCCTGACCCAACCTGATTTTAGTCTAAACGAAAATCTTTGAGAATCAAAAGCTTTTTGAGATGCATTGAAACGAAACCAAAAATCTATTGTGCAAAATTTTATATTTACAAA 90 21512682 0.952035687 13 89 496 0.992424242 2.117271296 0.068181818 0.344444444 0.553030303 90 1 0 131 2R:21512575-21512706 6 49 1275 FBgn0043070 584.3833333 29.10666667 44.48666667 0.083849072 1.683463124 1.101453619 2 2 2 0.15 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2R 21605708 21605713 - 2R_21605708_21605713_- 0.934417048 0.943406898 0.938911973 0.006356819 CG10433 FBtr0071690|FBtr0344882|FBtr0071691 21605674|21605674|21605674 21606071|21606071|21606325 2R - 21605679 21605797 3'utr CG10433 FlyBase G25520.1 TTAACTATATGTATATTAATTATATTGTACGAATAATTTTGTATGACATCTTAAGAGCCCCAAATCTACCCACAATGTGAAATATTTGACTGCTTCCAATAAATGCATTGTAAATATTT 53 21605712 0.983568705 15 51 406 0.942028986 1.812913357 0.507246377 0.264150943 0.434782609 53 4 0 65 2R:21605679-21605797 6 CG10433 FBtr0071691|FBtr0344882|FBtr0071690 21605674|21605674|21605674 21606325|21606071|21606071 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2R - 21605676 21605759 3'utr CG10433 FlyBase G19305.1 TTGTATGACATCTTAAGAGCCCCAAATCTACCCACAATGTGAAATATTTGACTGCTTCCAATAAATGCATTGTAAATATTTTCC 44 21605704 0.831555834 13 42 297 0.970149254 1.511883361 0.447761194 0.363636364 0.582089552 44 1 1 65 2R:21605676-21605759 6 39 1276 FBgn0034638 6526.64 846.7433333 1285.906667 0.00597551 0.046058821 0.030328795 -1 -9 -5 0.15 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2R 21606062 21606068 - 2R_21606062_21606068_- 0.808465056 0.741810367 0.775137711 0.04713199 CG10433 FBtr0071691|FBtr0071691 21605674|21605674 21606325|21606325 2R - 21606017 21606174 stop_codon CG10433 FlyBase G25523.1 CTGTGCGGAACACCTGGGACAGTGCATGGACCGATGCCACCAGAGGCTCCTGCGACCCGGTTCGGATTGCAAGAATGGCCAAGTCTGCTGCGTCCTGATTTAGTTATACTTAACCACACCATACACATACCCGTGCAGAGGAACAGCATCGTCAAATG 52 21606078 0.976479716 16 49 320 0.966101695 1.755874856 0.152542373 0.115384615 0.220338983 52 2 0 57 2R:21606017-21606174 7 CG10433 FBtr0071691|FBtr0071691 21605674|21605674 21606325|21606325 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2R - 21606061 21606103 stop_codon CG10433 FlyBase G19307.1 AGAATGGCCAAGTCTGCTGCGTCCTGATTTAGTTATACTTAAC 14 21606078 0.738780726 5 13 120 0.92 1.361727836 0.12 0.571428571 0.76 14 2 0 23 2R:21606061-21606103 7 9 1277 FBgn0034638 6526.64 846.7433333 1285.906667 0.001378964 0.010628959 0.006998953 10 10 10 0.15 dme-miR-92b-3p 6mer2-7 TGCAAT 2R 21614881 21614886 - 2R_21614881_21614886_- 0.991783976 0.999811601 0.995797789 0.00567637 CG18870 FBtr0071688|FBtr0345664 21614761|21613843 21615593|21615593 2R - 21614852 21614965 3'utr CG18870 FlyBase G25531.1 TCAATTTCGAGTATAAGATGTAGGCGCATACGCTCACAAGATAATGTACGAACTACAGTATTTACTCCACACATGTAACTGCAATGTAACTGAAAGTTCGGGCTAGTGGTCAGT 21 21614881 0.969143481 8 21 115 1 1.380211242 0.125 0.095238095 0.208333333 21 0 0 24 2R:21614852-21614965 6 CG18870 FBtr0345664|FBtr0071688 21613843|21614761 21615593|21615593 TGCAAT 6mer2-7 dme-miR-92b-3p 2R - 21614856 21614976 3'utr CG18870 FlyBase G19310.1 GTGTCAATTGTTCAATTTCGAGTATAAGATGTAGGCGCATACGCTCACAAGATAATGTACGAACTACAGTATTTACTCCACACATGTAACTGCAATGTAACTGAAAGTTCGGGCTAGTGGT 22 21614881 0.968206536 9 20 120 0.9 1.431363764 0.2 0.272727273 0.466666667 22 3 0 27 2R:21614856-21614976 6 12.5 1278 FBgn0042180 173 9.316666667 14.31333333 0.072254335 1.341681574 0.873311598 -5 -5 -5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG 2R 21615068 21615074 - 2R_21615068_21615074_- 0.70296789 0.702968581 0.702968235 4.95E-07 CG18870 FBtr0071688|FBtr0345664 21614761|21613843 21615593|21615593 2R - 21615043 21615102 3'utr CG18870 FlyBase G25533.1 AAGACTGGGCCGAGCATTCCACATAGTTGTACCTGTTTCTGTACTGCATAGATATGTATA 155 21615075 0.744084706 10 148 1397 0.948186528 2.26245109 0.062176166 0.2 0.357512953 155 10 0 183 2R:21615043-21615102 7 CG18870 FBtr0345664|FBtr0071688 21613843|21614761 21615593|21615593 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" 2R - 21615044 21615102 3'utr CG18870 FlyBase G19312.1 AAGACTGGGCCGAGCATTCCACATAGTTGTACCTGTTTCTGTACTGCATAGATATGTAT 113 21615075 0.901522729 8 109 993 0.957575758 1.897627091 0.096969697 0.336283186 0.545454545 113 6 1 158 2R:21615044-21615102 7 129.5 1279 FBgn0042180 173 9.316666667 14.31333333 0.748554913 13.89982111 9.047508151 1 1 1 0.15 dme-miR-92b-3p 6mer2-7 TGCAAT 2R 21619359 21619364 - 2R_21619359_21619364_- 0.944383098 0.782793888 0.863588493 0.114260819 PTP-ER FBtr0071686 21619319 21620046 2R - 21619330 21619406 3'utr PTP-ER FlyBase G25547.1 AAGTAAAATGGAAACCCATAAATGAACATGTATTTAAGTTTATGCAATGGAACTAGTCAAATAAAAATTAGAAACAT 65 21619359 0.977130468 10 55 356 0.875 1.367976785 0.1875 0.184615385 0.3375 65 8 2 70 2R:21619330-21619406 6 PTP-ER FBtr0071686 21619319 21620046 TGCAAT 6mer2-7 dme-miR-92b-3p 2R - 21619332 21619386 3'utr PTP-ER FlyBase G19319.1 AATGAACATGTATTTAAGTTTATGCAATGGAACTAGTCAAATAAAAATTAGAAAC 37 21619359 0.970019958 6 31 179 0.890909091 1.69019608 0.181818182 0.324324324 0.545454545 37 6 0 49 2R:21619332-21619386 6 46 1280 FBgn0016641 329.97 7.83 11.97333333 0.139406613 5.874840358 3.841870824 -5 -5 -5 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 21619648 21619653 - 2R_21619648_21619653_- 0.999999999 0.999976693 0.999988346 1.65E-05 PTP-ER FBtr0071686 21619319 21620046 2R - 21619601 21619677 3'utr PTP-ER FlyBase G25548.2 AATTATTATACCCTACCTTACCTTACCAAAACCATACCTTACCATAAAGATGCGCATCTATATATGACTCGCGACGT 26 21619627 0.861228897 10 22 159 0.8 0.970036777 0 0.346153846 0.514285714 26 5 2 28 2R:21619601-21619677 6 PTP-ER FBtr0071686 21619319 21620046 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 21619612 21619673 3'utr PTP-ER FlyBase G19320.1 ATTATACCCTACCTTACCTTACCAAAACCATACCTTACCATAAAGATGCGCATCTATATATG 17 21619660 0.796097938 7 16 101 0.952380952 1.301029996 0 0.235294118 0.380952381 17 1 0 20 2R:21619612-21619673 6 12 1281 FBgn0016641 329.97 7.83 11.97333333 0.036366942 1.53256705 1.002227171 -26 7 -9.5 0.15 dme-miR-305-5p 6mer2-7 GTACAA 2R 21631215 21631220 + 2R_21631215_21631220_+ 0.967144636 0.953646602 0.960395619 0.009544527 mahj FBtr0304728|FBtr0071658 21630876|21630876 21631422|21631276 2R + 21631187 21631231 3'utr mahj FlyBase G18105.1 ATCTATAAATTGTTTAACAATTTTCATTGTACAAGCCTGAATAAA 6 21631213 0.983126183 3 5 40 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 2R:21631187-21631231 6 mahj FBtr0304728|FBtr0071658 21630876|21630876 21631422|21631276 GTACAA 6mer2-7 dme-miR-305-5p 2R + 21631188 21631228 3'utr mahj FlyBase G13790.1 TCTATAAATTGTTTAACAATTTTCATTGTACAAGCCTGAAT 5 21631213 0.983945263 2 5 40 1 0.84509804 0.285714286 0.2 0.428571429 5 0 0 7 2R:21631188-21631228 6 4.5 1282 FBgn0034641 1067.043333 24.44 37.54 0.004217261 0.184124386 0.119872136 2 2 2 0.15 dme-miR-305-3p 7mer-A1 TGTGCCA 2R 21638217 21638223 + 2R_21638217_21638223_+ 0.636518587 0.596802846 0.616660716 0.028083312 CG10321 FBtr0071660|FBtr0330228 21637910|21637970 21638399|21638399 2R + 21638138 21638235 3'utr CG10321 FlyBase G18127.1 AGCAGATACGAAACTTTAGGTAGGCAGATCGAGGCGGATCCTCACATCCAAACGCTTGGGGCATAAATCCTGCGTGGACTGTGCCAGTTTTTGTTTTT 71 21638219 0.882143491 10 69 374 0.974683544 1.58546073 0.17721519 0.098591549 0.189873418 71 1 1 77 2R:21638138-21638235 7 CG10321 FBtr0330228|FBtr0071660 21637970|21637910 21638399|21638399 TGTGCCA 7mer-A1 dme-miR-305-3p 2R + 21638131 21638236 3'utr CG10321 FlyBase G13803.1 TTTTGTAAGCAGATACGAAACTTTAGGTAGGCAGATCGAGGCGGATCCTCACATCCAAACGCTTGGGGCATAAATCCTGCGTGGACTGTGCCAGTTTTTGTTTTTA 54 21638219 0.764653944 12 52 272 0.952380952 1.425968732 0.30952381 0.388888889 0.607142857 54 2 2 80 2R:21638131-21638236 7 43.5 1283 FBgn0034643 611.73 22.34 34.24 0.071109803 1.947179946 1.270443925 -2 -2 -2 0.15 dme-miR-14-3p 6mer2-7 AGACTG 2R 21638281 21638286 + 2R_21638281_21638286_+ 0.996576745 0.995063264 0.995820004 0.001070135 CG10321 FBtr0071660|FBtr0330228 21637910|21637970 21638399|21638399 2R + 21638240 21638307 3'utr CG10321 FlyBase G18128.1 TTATTACCCTACTATTATTATTTTGTTTTCCCGGGGAATACAGACTGGCATTTTAGGCTAAACGTATT 104 21638278 0.986806351 7 100 705 0.965517241 2.049218023 0.086206897 0.105769231 0.198275862 104 4 0 112 2R:21638240-21638307 6 CG10321 FBtr0330228|FBtr0071660 21637970|21637910 21638399|21638399 AGACTG 6mer2-7 dme-miR-14-3p 2R + 21638240 21638341 3'utr CG10321 FlyBase G13804.1 TTATTACCCTACTATTATTATTTTGTTTTCCCGGGGAATACAGACTGGCATTTTAGGCTAAACGTATTTTGGCGTTGGGTTTTCATTGTTGGGCTTTGAAAT 62 21638278 0.980888622 9 58 407 0.943820225 1.924279286 0.134831461 0.370967742 0.561797753 62 5 0 84 2R:21638240-21638341 6 78 1284 FBgn0034643 611.73 22.34 34.24 0.127507234 3.491495076 2.278037383 3 3 3 0.15 dme-miR-305-5p 8mer-m1 AGTACAAT 2R 21657153 21657160 + 2R_21657153_21657160_+ 0.443025515 0.436258864 0.43964219 0.004784709 CG10082 FBtr0071661|FBtr0071662 21657072|21657072 21657935|21657428 2R + 21657087 21657186 3'utr CG10082 FlyBase G18152.1 ACCACATCGGGAGAAAAGAATATGAATATATATATGGGGCAACTGGGCGGGAACACACAAGTTAAAAGTACAATTTGATTTCAGAATACCTAAATTGTTG 48 21657161 0.972558346 13 46 271 0.95 1.45484486 0.116666667 0.1875 0.35 48 2 1 57 2R:21657087-21657186 8 CG10082 FBtr0071662|FBtr0071661 21657072|21657072 21657428|21657935 AGTACAAT 8mer-m1 dme-miR-305-5p 2R + 21657082 21657193 3'utr CG10082 FlyBase G13818.1 TAGAAACCACATCGGGAGAAAAGAATATGAATATATATATGGGGCAACTGGGCGGGAACACACAAGTTAAAAGTACAATTTGATTTCAGAATACCTAAATTGTTGTAGCAAC 43 21657161 0.941819812 12 42 228 0.966666667 1.763427994 0.1 0.279069767 0.483333333 43 2 0 58 2R:21657082-21657193 8 25 1285 FBgn0034644 417.2733333 12.82666667 19.61 0.059912767 1.949064449 1.274859765 -8 -8 -8 0.15 dme-miR-33-5p 8mer-A1 CAATGCAA 2R 21657623 21657630 + 2R_21657623_21657630_+ 0.600933982 0.634537615 0.617735799 0.023761333 CG10082 FBtr0071661 21657072 21657935 2R + 21657598 21657679 3'utr CG10082 FlyBase G18156.1 GATTTTATACCTAGCCATTACAATTCAATGCAAAATGACAAAGCGATAGAGCGTAATCATCAGTATTTCGTTGTATGTATCT 28 21657622 0.859954774 5 28 207 1 1.491361694 0.612903226 0.107142857 0.193548387 28 0 0 31 2R:21657598-21657679 8 CG10082 FBtr0071661 21657072 21657935 CAATGCAA 8mer-A1 dme-miR-33-5p 2R + 21657608 21657670 3'utr CG10082 FlyBase G13821.1 CTAGCCATTACAATTCAATGCAAAATGACAAAGCGATAGAGCGTAATCATCAGTATTTCGTTG 23 21657622 0.800931886 3 22 138 0.939393939 1.491361694 0.575757576 0.304347826 0.515151515 23 2 0 31 2R:21657608-21657670 8 14 1286 FBgn0034644 417.2733333 12.82666667 19.61 0.03355115 1.091476091 0.713921469 1 1 1 0.15 dme-miR-11-3p 7mer-m1 TGTGATG 2R 21692013 21692019 + 2R_21692013_21692019_+ 0.506387384 0.504304239 0.505345811 0.001473045 CG42496 FBtr0300625|FBtr0342958 21691979|21691979 21692764|21692764 2R + 21691973 21692044 start_codon CG42496 FlyBase G18183.1 AGCAATAGCCGGCATTGTGAGCCATGAAACCCGAACGTAATGTGATGATAGCGGCCACCGGAAGTGTGGCCA 45 21692021 0.972963913 9 33 193 0.759259259 1.010723865 0.518518519 0.177777778 0.314814815 45 10 3 41 2R:21691973-21692044 7 CG42496 FBtr0342958|FBtr0300625 21691979|21691979 21692764|21692764 TGTGATG 7mer-m1 dme-miR-11-3p 2R + 21691977 21692058 start_codon CG42496 FlyBase G13838.1 ATAGCCGGCATTGTGAGCCATGAAACCCGAACGTAATGTGATGATAGCGGCCACCGGAAGTGTGGCCACCATTAAGTTAGCC 36 21692021 0.955417194 5 31 148 0.928571429 1.414973348 0.5 0.388888889 0.607142857 36 3 1 52 2R:21691977-21692058 7 35 1287 FBgn0260222 113.5 13.05 20.08333333 0.308370044 2.681992337 1.742738589 -8 -8 -8 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 21716636 21716643 + 2R_21716636_21716643_+ 0.62313309 0.623513666 0.623323378 0.000269125 HmgD FBtr0071709|FBtr0071708 21715879|21715879 21716727|21716727 2R + 21716482 21716689 3'utr HmgD FlyBase G18195.1 ACGAAAAACAATACACACACCGCAAATGAATCGAACGAAATTTCGCTCAGGTCTTTTCGTCATTTTGCATTAAACTTAATGTTTAACGTCTTGTTAGCTAAAGATGTATAGCAGAAGAGGAAGTCGGAAGTTAGATGAGACAAGCAGATGTAATTGCATTTAATCGGTAGTTTTAATTGATTACTATACGTACTATTTAAAGAGAAAA 561 21716635 0.989745973 24 546 5364 0.975688817 2.001445241 0.235008104 0.08912656 0.171799028 561 10 5 602 2R:21716482-21716689 8 HmgD FBtr0071709|FBtr0071708 21715879|21715879 21716727|21716727 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 21716590 21716663 3'utr HmgD FlyBase G13848.1 TAGCAGAAGAGGAAGTCGGAAGTTAGATGAGACAAGCAGATGTAATTGCATTTAATCGGTAGTTTTAATTGATT 304 21716635 0.975189149 13 291 2786 0.958963283 2.170261715 0.306695464 0.368421053 0.585313175 304 17 2 444 2R:21716590-21716663 8 394 1288 FBgn0004362 7189.043333 869.6 1331.753333 0.054805623 0.453081877 0.295850583 1 1 1 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 2R 21717304 21717309 - 2R_21717304_21717309_- 0.999677458 0.993395898 0.996536678 0.004441762 Tango11 FBtr0342965|FBtr0071747|FBtr0071746 21716778|21716778|21716778 21717417|21717417|21717417 2R - 21717235 21717384 3'utr Tango11 FlyBase G25606.1 TCTGCGCTGGGTGCCAAGACAACCACCTTGCTATGGACACCCTTTTTGGAACAGCTTCTTTCGTTTCTTGACTTTTGTGTTTCTTTTGTGGAAAGGCTCTGAGAGAGACTTTGTTTTTTGTTTGCCATAATTTTGTAGACTAAGCTCCGT 55 21717310 0.926836458 21 54 503 0.984126984 1.491361694 0.19047619 0.127272727 0.238095238 55 0 1 62 2R:21717235-21717384 6 Tango11 FBtr0071746|FBtr0071747|FBtr0342965 21716778|21716778|21716778 21717417|21717417|21717417 TGTGTT 6mer3-8 dme-miR-317-3p 2R - 21717239 21717335 3'utr Tango11 FlyBase G19365.1 AACAGCTTCTTTCGTTTCTTGACTTTTGTGTTTCTTTTGTGGAAAGGCTCTGAGAGAGACTTTGTTTTTTGTTTGCCATAATTTTGTAGACTAAGCT 40 21717310 0.768185878 11 37 411 0.952380952 1.77815125 0.26984127 0.4 0.619047619 40 3 0 60 2R:21717239-21717335 6 19.5 1289 FBgn0050404 496.0066667 38.97333333 59.5 0.039313988 0.500342114 0.327731092 1 1 1 0.15 dme-miR-970-3p 6mer2-7 CTTATG 2R 21723924 21723929 + 2R_21723924_21723929_+ 0.551063138 0.533527512 0.542295325 0.012399542 LBR FBtr0071712|FBtr0071713|FBtr0071711 21723656|21723656|21723656 21724055|21724055|21724055 2R + 21723894 21723958 3'utr LBR FlyBase G18209.1 ATAGTTAAAAAACCCATCTAGCTGTACGAACTTATGCGCTTAAGATCTAGACATCTTATATAATC 350 21723928 0.965202527 11 339 2368 0.962529274 1.710751835 0.049180328 0.191428571 0.337236534 350 9 7 411 2R:21723894-21723958 6 LBR FBtr0071713|FBtr0071711|FBtr0071712 21723656|21723656|21723656 21724055|21724055|21724055 CTTATG 6mer2-7 dme-miR-970-3p 2R + 21723900 21723958 3'utr LBR FlyBase G13862.1 AAAAAACCCATCTAGCTGTACGAACTTATGCGCTTAAGATCTAGACATCTTATATAATC 211 21723928 0.754587737 9 208 1342 0.986970684 2.180412633 0.03257329 0.336492891 0.543973941 211 3 1 303 2R:21723900-21723958 6 276 1290 FBgn0034657 642.43 28.1 42.96 0.429618791 9.822064057 6.424581006 -4 -4 -4 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 2R 21975811 21975816 + 2R_21975811_21975816_+ 0.987999981 0.986076921 0.987038451 0.001359837 CG9304 FBtr0071726|FBtr0345537 21975523|21975523 21976196|21976386 2R + 21975790 21975826 3'utr CG9304 FlyBase G18216.1 AAGTTAACATTTAACTGACTTTTGACTTGAGCTGAGT 6 21975811 0.762634674 3 6 54 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 2R:21975790-21975826 6 CG9304 FBtr0071726|FBtr0345537 21975523|21975523 21976196|21976386 TTGACT 6mer3-8 dme-miR-1012-3p 2R + 21975790 21975825 3'utr CG9304 FlyBase G13868.1 AAGTTAACATTTAACTGACTTTTGACTTGAGCTGAG 11 21975810 0.821556826 4 11 80 1 1.278753601 0.473684211 0.545454545 0.736842105 11 0 0 19 2R:21975790-21975825 6 8.5 1291 FBgn0034674 656.3166667 28.69666667 44.06 0.012951065 0.296201649 0.192918747 0 1 0.5 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 2R 21975944 21975950 + 2R_21975944_21975950_+ 0.521201625 0.521182744 0.521192184 1.34E-05 CG9304 FBtr0071726|FBtr0345537 21975523|21975523 21976196|21976386 2R + 21975913 21975982 3'utr CG9304 FlyBase G18218.1 AGCGAGTGCAAGAATGCACCAGAGATTGTTGTGTGATTTTATGTAATATGCTTGAATTTATAATTAGTTT 51 21975942 0.991628349 10 50 544 0.983870968 1.785329835 0.064516129 0.196078431 0.338709677 51 1 0 61 2R:21975913-21975982 7 CG9304 FBtr0071726|FBtr0345537 21975523|21975523 21976196|21976386 TGTGATT 7mer-m1 dme-miR-308-3p 2R + 21975911 21975964 3'utr CG9304 FlyBase G13870.1 AGAGCGAGTGCAAGAATGCACCAGAGATTGTTGTGTGATTTTATGTAATATGCT 32 21975942 0.991411445 8 31 336 0.979166667 1.672097858 0.125 0.40625 0.604166667 32 1 0 47 2R:21975911-21975964 7 40 1292 FBgn0034674 656.3166667 28.69666667 44.06 0.06094619 1.393890115 0.907852928 2 2 2 0.15 dme-miR-965-3p 7mer-m8 TACGCTT 2R 21976016 21976022 + 2R_21976016_21976022_+ 0.616178781 0.616238942 0.616208862 4.25E-05 CG9304 FBtr0071726|FBtr0345537 21975523|21975523 21976196|21976386 2R + 21976003 21976035 3'utr CG9304 FlyBase G18219.1 CGATTCGATACAATACGCTTCAGCATCATCATT 51 21976016 0.873361361 3 50 258 0.984375 1.799340549 0.03125 0.235294118 0.390625 51 1 0 63 2R:21976003-21976035 7 CG9304 FBtr0071726|FBtr0345537 21975523|21975523 21976196|21976386 TACGCTT 7mer-m8 dme-miR-965-3p 2R + 21976003 21976050 3'utr CG9304 FlyBase G13871.1 CGATTCGATACAATACGCTTCAGCATCATCATTTCGTTGCGGTAGTTT 43 21976016 0.956900754 5 43 206 1 1.812913357 0.076923077 0.325581395 0.553846154 43 0 0 65 2R:21976003-21976050 7 46 1293 FBgn0034674 656.3166667 28.69666667 44.06 0.070088118 1.602973632 1.044030867 0 0 0 0.15 dme-miR-184-5p 8mer-A1 TGATAAGA 2R 22069514 22069521 + 2R_22069514_22069521_+ 0.588756969 0.58547156 0.587114265 0.002323129 Snp FBtr0339101|FBtr0339102|FBtr0339100|FBtr0339099 22069312|22069312|22069312|22069312 22069757|22069757|22069757|22069757 2R + 22069469 22069573 3'utr Snp FlyBase G18225.1 TTTTTTTTTTTTTGCCCTGATTTTATATTTTATTGTAACGGCAATTGATAAGACTTGAACAATTCGAAGCATCGCAGCGATCATACATACAAATAAATTTATAAA 66 22069516 0.965860183 7 64 352 0.950617284 1.886490725 0.12345679 0.181818182 0.333333333 66 4 0 77 2R:22069469-22069573 8 Snp FBtr0339100|FBtr0339099|FBtr0339101|FBtr0339102 22069312|22069312|22069312|22069312 22069757|22069757|22069757|22069757 TGATAAGA 8mer-A1 dme-miR-184-5p 2R + 22069500 22069538 3'utr Snp FlyBase G13876.1 ATTGTAACGGCAATTGATAAGACTTGAACAATTCGAAGC 26 22069516 0.692366864 6 20 124 0.825 1.51851394 0.1 0.461538462 0.65 26 7 0 33 2R:22069500-22069538 8 38 1294 FBgn0265192 273.9833333 20.67666667 31.70333333 0.138694568 1.837820409 1.198612133 -2 -2 -2 0.15 dme-miR-8-3p 7mer-A1 AGTATTA 2R 22077766 22077772 + 2R_22077766_22077772_+ 0.823349029 0.823331403 0.823340216 1.24E-05 GlcT-1 FBtr0071755 22077671 22079381 2R + 22077680 22077961 3'utr GlcT-1 FlyBase G18240.1 TAGTTAAGTTTGTTATTTTGTACTTGTGAGCAAACGAACTCAGCGGACTGCAAGCGACTGGCGGGCGGCGTCTAGCGTCTGGTAGTAGTATTATTAGCTGAACCTTAGTCACTACGTAAGTCTAGACTTAAAGCTGTAAAAAGGCGAATGCGGAGCGGCATCCACGCACTCCTCCTGGACGTGAAGCGCGGCAGGCGGACCTAGATTAGTTTAGAAGACACTGTTTAGACGACGAGCGTATCGCTGCGATCGCTCGCCAGAGATTTAGATGTAGGCGTTCGA 158 22077776 0.999910226 36 151 1006 0.948979592 1.491361694 0.295918367 0.189873418 0.346938776 158 5 5 186 2R:22077680-22077961 7 GlcT-1 FBtr0071755 22077671 22079381 AGTATTA 7mer-A1 dme-miR-8-3p 2R + 22077613 22077877 stop_codon GlcT-1 FlyBase G13885.1 GGAACAACGGGGGACACGCTGATCTGCACGGGCGCCAAACAGCGACTGCTGGTGTCGTAGCACCTAATAGTTAAGTTTGTTATTTTGTACTTGTGAGCAAACGAACTCAGCGGACTGCAAGCGACTGGCGGGCGGCGTCTAGCGTCTGGTAGTAGTATTATTAGCTGAACCTTAGTCACTACGTAAGTCTAGACTTAAAGCTGTAAAAAGGCGAATGCGGAGCGGCATCCACGCACTCCTCCTGGACGTGAAGCGCGGCAGGCGG 87 22077776 0.970258852 29 81 467 0.928 1.763427994 0.36 0.298850575 0.512 87 8 1 116 2R:22077613-22077877 7 32.5 1295 FBgn0067102 306.5833333 10.92333333 16.72333333 0.106007067 2.97528227 1.943392466 -10 -10 -10 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2R 22085376 22085382 + 2R_22085376_22085382_+ 0.823349508 0.823003581 0.823176544 0.000244588 Synj FBtr0071757|FBtr0308239|FBtr0071756 22084902|22084902|22084902 22085767|22085767|22085421 2R + 22085362 22085397 3'utr Synj FlyBase G18263.1 AAATTATAGCCGTACTAGTCAAATTATGAAGTAAAG 10 22085373 0.757413683 4 10 64 1 1.146128036 0.071428571 0.3 0.5 10 0 0 14 2R:22085362-22085397 7 Synj FBtr0071757|FBtr0308239|FBtr0071756 22084902|22084902|22084902 22085767|22085767|22085421 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R + 22085306 22085386 3'utr Synj FlyBase G13903.1 TGAAGTATATGGGCGACAAAGTATTACACTAATCTGCATAAATGTAATGTTTAAATAAATTATAGCCGTACTAGTCAAATT 9 22085367 0.976053773 7 8 51 0.8 1.079181246 0 0.444444444 0.666666667 9 3 0 12 2R:22085306-22085386 7 7.5 1296 FBgn0034691 628.3666667 16.23 24.76333333 0.011935706 0.462107209 0.302867142 3 9 6 0.15 dme-miR-282-5p 7mer-A1 GAGGCTA 2R 22085548 22085554 + 2R_22085548_22085554_+ 0.823303391 0.823084751 0.823194071 0.000154574 Synj FBtr0071757|FBtr0308239 22084902|22084902 22085767|22085767 2R + 22085535 22085567 3'utr Synj FlyBase G18265.1 ATTCCGTCAATTTGAGGCTACATCCGGATTTCT 8 22085546 0.734100956 3 8 51 1 1 0 0.125 0.3 8 0 0 10 2R:22085535-22085567 7 Synj FBtr0071757|FBtr0308239 22084902|22084902 22085767|22085767 GAGGCTA 7mer-A1 dme-miR-282-5p 2R + 22085519 22085563 3'utr Synj FlyBase G13904.1 GTTAAACTATCGTTGTATTCCGTCAATTTGAGGCTACATCCGGAT 13 22085546 0.96545828 4 12 85 1 1.255272505 0.111111111 0.307692308 0.5 13 0 0 18 2R:22085519-22085563 7 9.5 1297 FBgn0034691 628.3666667 16.23 24.76333333 0.015118561 0.585335798 0.383631714 2 2 2 0.15 dme-miR-283-5p 7mer-A1 GATATTA 2R 22107934 22107940 - 2R_22107934_22107940_- 0.782911824 0.782889758 0.782900791 1.56E-05 Vrp1 FBtr0302295|FBtr0071792|FBtr0071796|FBtr0071791|FBtr0071795|FBtr0071793|FBtr0302298|FBtr0071794|FBtr0342980 22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579 22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477 2R - 22107910 22107970 3'utr Vrp1 FlyBase G25635.1 AAGGGAAGGACTATGGAAGCTTCCCCTCGCGATATTACCACTAAGCACACACAATATTATT 36 22107936 0.972761253 7 31 175 0.895833333 0.934498451 0.229166667 0.305555556 0.479166667 36 1 4 43 2R:22107910-22107970 7 Vrp1 FBtr0071793|FBtr0302298|FBtr0071794|FBtr0342980|FBtr0302295|FBtr0071796|FBtr0071792|FBtr0071791|FBtr0071795 22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579 22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477 GATATTA 7mer-A1 dme-miR-283-5p 2R - 22107924 22107987 3'utr Vrp1 FlyBase G19387.1 ATTTTGTTACATTTCAAAAGGGAAGGACTATGGAAGCTTCCCCTCGCGATATTACCACTAAGCA 31 22107936 0.842584372 5 23 172 0.790697674 0.753327667 0.465116279 0.290322581 0.488372093 31 4 5 34 2R:22107924-22107987 7 29 1298 FBgn0243516 610.6533333 20.62333333 31.73 0.04749012 1.406174236 0.913961551 -4 -4 -4 0.15 dme-miR-8-3p 6mer3-8 CAGTAT 2R 22108229 22108234 - 2R_22108229_22108234_- 0.999871013 0.999999281 0.999935147 9.07E-05 Vrp1 FBtr0302295|FBtr0071792|FBtr0071796|FBtr0071791|FBtr0071795|FBtr0071793|FBtr0302298|FBtr0071794|FBtr0342980 22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579 22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477 2R - 22108163 22108262 3'utr Vrp1 FlyBase G25637.1 AATTTTAATTTTAAAAGTGTATTACTACCAGTATAGATTATTATTGTATAGGAAGGGAAAGCCCAGGCTTACAATCCACAGCACACACATATATATGTTA 13 22108231 0.971263209 10 13 79 1 1.146128036 0.071428571 0.076923077 0.142857143 13 0 0 14 2R:22108163-22108262 6 Vrp1 FBtr0071793|FBtr0302298|FBtr0071794|FBtr0342980|FBtr0302295|FBtr0071796|FBtr0071792|FBtr0071791|FBtr0071795 22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579 22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477 CAGTAT 6mer3-8 dme-miR-8-3p 2R - 22108191 22108254 3'utr Vrp1 FlyBase G19389.1 TTTTAAAAGTGTATTACTACCAGTATAGATTATTATTGTATAGGAAGGGAAAGCCCAGGCTTAC 8 22108223 0.993185206 5 6 72 0.846153846 1.041392685 0.076923077 0.375 0.615384615 8 2 0 11 2R:22108191-22108254 6 6 1299 FBgn0243516 610.6533333 20.62333333 31.73 0.009825542 0.290932601 0.189095493 -3 -11 -7 0.15 dme-miR-970-3p 6mer2-7 CTTATG 2R 22217220 22217225 + 2R_22217220_22217225_+ 0.619235485 0.771917287 0.695576386 0.107962336 ari-2 FBtr0071774 22216391 22217264 2R + 22217100 22217248 3'utr ari-2 FlyBase G18327.1 AAGAACGAAGATAGATACTCCCCGTCCCCGATCCCGTTCCTTTTGATTCTCACTCGATTCTCGATTAACTTTGTAAGCTGAATCATAAATTATATTCTAGGATTACGCTATGTATGTATGCTTATGCGACTGAATTTGAATTAAATTTA 101 22217223 0.900660744 28 97 888 0.941176471 1.748188027 0.201680672 0.148514851 0.277310924 101 6 1 112 2R:22217100-22217248 6 ari-2 FBtr0071774 22216391 22217264 CTTATG 6mer2-7 dme-miR-970-3p 2R + 22217167 22217248 3'utr ari-2 FlyBase G13951.2 ACTTTGTAAGCTGAATCATAAATTATATTCTAGGATTACGCTATGTATGTATGCTTATGCGACTGAATTTGAATTAAATTTA 39 22217222 0.987367256 13 36 328 0.9375 1.77815125 0.28125 0.461538462 0.671875 39 4 0 60 2R:22217167-22217248 6 46 1300 FBgn0025186 276.3333333 11.22 17.22333333 0.166465621 4.099821747 2.670795433 -3 -2 -2.5 0.15 dme-miR-11-3p 7mer-m1 TGTGATG 2R 22298338 22298344 - 2R_22298338_22298344_- 0.535593466 0.535583529 0.535588498 7.07E-06 wdp FBtr0071851|FBtr0071852|FBtr0071849|FBtr0071850|FBtr0342984 22298212|22298212|22298212|22298212|22298212 22298905|22298905|22298905|22298905|22298905 2R - 22298329 22298440 3'utr wdp FlyBase G25682.1 TGAATTCAGTCGTCGAGTGCAAAATATCAATGAGCCGGGGAAAGCGGAAAGGAGTTAACTCTTTTGCATGATAAATGCTATCAATCTGCATCTGCATGTGATGTTCACACCA 19 22298353 0.995783327 9 19 133 1 1.342422681 0.090909091 0.157894737 0.272727273 19 0 0 22 2R:22298329-22298440 7 wdp FBtr0071850|FBtr0342984|FBtr0071852|FBtr0071849|FBtr0071851 22298212|22298212|22298212|22298212|22298212 22298905|22298905|22298905|22298905|22298905 TGTGATG 7mer-m1 dme-miR-11-3p 2R - 22298329 22298410 3'utr wdp FlyBase G19428.1 TGAGCCGGGGAAAGCGGAAAGGAGTTAACTCTTTTGCATGATAAATGCTATCAATCTGCATCTGCATGTGATGTTCACACCA 12 22298351 0.980695754 7 11 72 0.916666667 1.342422681 0.166666667 0.75 0.875 12 2 0 22 2R:22298329-22298410 7 8 1301 FBgn0034718 26.33333333 1.036666667 1.556666667 0.303797468 7.717041801 5.139186296 9 7 8 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2R 22298467 22298473 - 2R_22298467_22298473_- 0.657536572 0.609774782 0.633655677 0.033772693 wdp FBtr0071851|FBtr0071852|FBtr0071849|FBtr0071850|FBtr0342984 22298212|22298212|22298212|22298212|22298212 22298905|22298905|22298905|22298905|22298905 2R - 22298453 22298499 3'utr wdp FlyBase G25683.1 ACTCCTAAGCGTAAATCTAGTTTAATACCAAAGTTAAAAAAATATAT 77 22298474 0.784598154 4 74 530 0.943820225 1.447158031 0.123595506 0.142857143 0.258426966 77 3 2 84 2R:22298453-22298499 7 wdp FBtr0071850|FBtr0342984|FBtr0071852|FBtr0071849|FBtr0071851 22298212|22298212|22298212|22298212|22298212 22298905|22298905|22298905|22298905|22298905 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 22298443 22298493 3'utr wdp FlyBase G19429.1 AAGCGTAAATCTAGTTTAATACCAAAGTTAAAAAAATATATGCGTTTAAAC 31 22298466 0.952245437 4 30 190 0.977272727 1.633468456 0.068181818 0.290322581 0.5 31 1 0 43 2R:22298443-22298493 7 54 1302 FBgn0034718 26.33333333 1.036666667 1.556666667 2.050632911 52.09003215 34.68950749 1 -7 -3 0.15 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2R 22328788 22328793 + 2R_22328788_22328793_+ 0.999784465 0.999855867 0.999820166 5.05E-05 Gp150 FBtr0071815|FBtr0071813|FBtr0342986|FBtr0342985|FBtr0071816|FBtr0071814 22328523|22328523|22328523|22328523|22328523|22328523 22329416|22329416|22329416|22329416|22329416|22329416 2R + 22328617 22328848 3'utr Gp150 FlyBase G18349.2 AAAGTGGAAAATCACATCAGACAATTGACTAAACACAAGCACAAGAATGTAAGAAACAGGAGGAGGAGCAGTAGGTGGCAGTTAAAAGTATTAGCGAAAGTGCGAGGAAACAAAGCAACAACTAAAAAATACTTGAATCCAAATAAGAGATTGAAAGAGAGAGAATAAATCTTTGACAAAATCCTTTATCCTTGAAATATCCTGTACCATCAAATACTGTTAAGACCAGTCA 339 22328789 0.975198585 24 318 1705 0.945595855 1.717194824 0.098445596 0.109144543 0.21761658 339 15 6 365 2R:22328617-22328848 6 Gp150 FBtr0071814|FBtr0071816|FBtr0342985|FBtr0342986|FBtr0071813|FBtr0071815 22328523|22328523|22328523|22328523|22328523|22328523 22329416|22329416|22329416|22329416|22329416|22329416 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2R + 22328615 22328813 3'utr Gp150 FlyBase G13968.2 AAAAAGTGGAAAATCACATCAGACAATTGACTAAACACAAGCACAAGAATGTAAGAAACAGGAGGAGGAGCAGTAGGTGGCAGTTAAAAGTATTAGCGAAAGTGCGAGGAAACAAAGCAACAACTAAAAAATACTTGAATCCAAATAAGAGATTGAAAGAGAGAGAATAAATCTTTGACAAAATCCTTTATCCTTGAAA 184 22328788 0.973954171 24 168 822 0.928057554 1.566521666 0.133093525 0.375 0.586330935 184 14 6 258 2R:22328615-22328813 6 147 1303 FBgn0013272 4600.843333 132.9433333 202.8033333 0.031950664 1.105734273 0.724840157 -1 0 -0.5 0.15 dme-miR-190-5p 6mer2-7 CATATC 2R 22328968 22328973 + 2R_22328968_22328973_+ 0.755736991 0.773704363 0.764720677 0.01270487 Gp150 FBtr0071815|FBtr0071813|FBtr0342986|FBtr0342985|FBtr0071816|FBtr0071814 22328523|22328523|22328523|22328523|22328523|22328523 22329416|22329416|22329416|22329416|22329416|22329416 2R + 22328894 22329041 3'utr Gp150 FlyBase G18350.1 GATGAGCAACCGTTTCGAAAGCAACGGATTTGCAATTTATCAAACCTCTGCCCACAATCCGTATCCAATTAGTCCATATCCGGGAACAACTTGAAGATTTAGTGCCATTTTGCCAAAATTCAAACCGAGCGAAAATTACTTAAACACA 49 22328971 0.972487237 17 42 252 0.86440678 1.230448921 0.033898305 0.163265306 0.305084746 49 6 2 51 2R:22328894-22329041 6 Gp150 FBtr0071814|FBtr0071816|FBtr0342985|FBtr0342986|FBtr0071813|FBtr0071815 22328523|22328523|22328523|22328523|22328523|22328523 22329416|22329416|22329416|22329416|22329416|22329416 CATATC 6mer2-7 dme-miR-190-5p 2R + 22328936 22328999 3'utr Gp150 FlyBase G13969.1 AACCTCTGCCCACAATCCGTATCCAATTAGTCCATATCCGGGAACAACTTGAAGATTTAGTGCC 25 22328971 0.935253529 4 24 96 1 1.602059991 0.025 0.32 0.575 25 0 0 40 2R:22328936-22328999 6 24.5 1304 FBgn0013272 4600.843333 132.9433333 202.8033333 0.005325111 0.184289045 0.120806693 -3 -3 -3 0.15 dme-miR-33-5p 6mer3-8 CAATGC 2R 22378402 22378407 + 2R_22378402_22378407_+ 0.886600482 0.999762433 0.943181457 0.080017547 Rtf1 FBtr0342988 22377752 22378484 2R + 22378343 22378467 3'utr Rtf1 FlyBase G18367.1 ATTGAAAGGGTTATATAAGACTCATTCAAGCGAGTATGTATCCGTTGGTTGTAACCGTTCAATGCTGTATTAGATTAAGGCAAAATTCATCAGTTGTAGCAACAGCTTTCATATACTTAAATATA 34 22378406 0.982121753 17 33 259 0.97826087 1.653212514 0.282608696 0.264705882 0.456521739 34 1 0 45 2R:22378343-22378467 6 Rtf1 FBtr0342988 22377752 22378484 CAATGC 6mer3-8 dme-miR-33-5p 2R + 22378378 22378464 3'utr Rtf1 FlyBase G13981.1 ATGTATCCGTTGGTTGTAACCGTTCAATGCTGTATTAGATTAAGGCAAAATTCATCAGTTGTAGCAACAGCTTTCATATACTTAAAT 16 22378405 0.912420192 8 16 124 1 1.301029996 0.15 0.25 0.4 16 0 0 20 2R:22378378-22378464 6 12.5 1305 FBgn0034722 664.7666667 27.26666667 41.77666667 0.01880359 0.458435208 0.299210085 -4 -3 -3.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 22425950 22425955 - 2R_22425950_22425955_- 0.988809154 0.998955831 0.993882493 0.00717473 CG10344 FBtr0071840|FBtr0071840|FBtr0071840|FBtr0071841|FBtr0071841|FBtr0071841 22425731|22425731|22425731|22425731|22425731|22425731 22426203|22426203|22426203|22426021|22426021|22426021 2R - 22425905 22426006 3'utr CG10344 FlyBase G25720.1 AGGATAAATATCTGCTGTGCAGTTCCTACCTGGGGATCCCGTAAATGACTACTGTGACTTTGGCAACCTCTGGCTGGTTAAATGTTAGTCTTAAGATAGTGA 43 22425947 0.979602929 14 41 285 0.961538462 1.397940009 0.096153846 0.139534884 0.288461538 43 1 1 50 2R:22425905-22426006 6 CG10344 FBtr0071841|FBtr0071841|FBtr0071841|FBtr0071840|FBtr0071840|FBtr0071840 22425731|22425731|22425731|22425731|22425731|22425731 22426021|22426021|22426021|22426203|22426203|22426203 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 22425905 22425998 3'utr CG10344 FlyBase G19456.1 TATCTGCTGTGCAGTTCCTACCTGGGGATCCCGTAAATGACTACTGTGACTTTGGCAACCTCTGGCTGGTTAAATGTTAGTCTTAAGATAGTGA 29 22425948 0.983546925 9 27 212 0.930232558 1.602059991 0.046511628 0.379310345 0.581395349 29 3 0 40 2R:22425905-22425998 6 23.5 1306 FBgn0034729 69.31 7.356666667 11.47666667 0.339056413 3.194381513 2.047632878 -8 -7 -7.5 0.15 dme-miR-999-3p 8mer-A1 AGTTAACA 2R 22496708 22496715 - 2R_22496708_22496715_- 0.643926235 0.643917368 0.643921801 6.22E-06 px FBtr0331941|FBtr0112820|FBtr0071838 22496502|22496502|22496502 22496802|22496802|22496802 2R - 22496680 22496739 3'utr px FlyBase G25726.1 TGAAAGTCGCATCGGATCGGAACTAGTTAACATCTACCTTCAGTAACATTATACTAAGCG 18 22496715 0.692980713 8 16 126 0.9 0.954242509 0.1 0.111111111 0.2 18 1 1 18 2R:22496680-22496739 8 px FBtr0112820|FBtr0071838|FBtr0331941 22496502|22496502|22496502 22496802|22496802|22496802 AGTTAACA 8mer-A1 dme-miR-999-3p 2R - 22496687 22496739 3'utr px FlyBase G19460.1 TGAAAGTCGCATCGGATCGGAACTAGTTAACATCTACCTTCAGTAACATTATA 11 22496715 0.773194885 5 11 68 1 1.278753601 0.368421053 0.454545455 0.684210526 11 0 0 19 2R:22496687-22496739 8 13.5 1307 FBgn0003175 880.3466667 16.72333333 25.61666667 0.015334868 0.807255332 0.527000651 0 0 0 0.15 dme-miR-305-5p 6mer2-7 GTACAA 2R 22563548 22563553 - 2R_22563548_22563553_- 0.989896646 0.994875532 0.992386089 0.003520614 dnr1 FBtr0071837|FBtr0330229 22563509|22563150 22564119|22564059 2R - 22563535 22563576 3'utr dnr1 FlyBase G25744.1 CTTATACGATGTAGCCCTTGAATGTACAACATAGTTACTTAC 6 22563554 0.861688499 3 6 42 1 0.77815125 0.166666667 0 0 6 0 0 6 2R:22563535-22563576 6 dnr1 FBtr0071837|FBtr0330229 22563509|22563150 22564119|22564059 GTACAA 6mer2-7 dme-miR-305-5p 2R - 22563534 22563577 3'utr dnr1 FlyBase G19472.1 CCTTATACGATGTAGCCCTTGAATGTACAACATAGTTACTTACT 8 22563555 0.84610267 3 8 54 1 1 0.3 0.25 0.4 8 0 0 10 2R:22563534-22563577 6 6 1308 FBgn0260866 45.33333333 1.52 2.263333333 0.132352941 3.947368421 2.65095729 1 2 1.5 0.15 dme-miR-8-3p 6mer2-7 AGTATT 2R 22563863 22563868 - 2R_22563863_22563868_- 0.625356492 0.99998685 0.812671671 0.264903696 dnr1 FBtr0071837|FBtr0330229 22563509|22563150 22564119|22564059 2R - 22563826 22563915 3'utr dnr1 FlyBase G25745.1 AGCGGCGTAGTCAGTCTTTCAAACAATCTTAGCTCTATCTTTACTCAAGTATTCTAGCGACATAAGCAACTGAAACTTTAACTCTAACTC 46 22563861 0.988486033 7 40 406 0.884615385 1.662757832 0.115384615 0.108695652 0.211538462 46 6 0 46 2R:22563826-22563915 6 dnr1 FBtr0071837|FBtr0330229 22563509|22563150 22564119|22564059 AGTATT 6mer2-7 dme-miR-8-3p 2R - 22563832 22563903 3'utr dnr1 FlyBase G19474.1 AGTCTTTCAAACAATCTTAGCTCTATCTTTACTCAAGTATTCTAGCGACATAAGCAACTGAAACTTTAACTC 27 22563861 0.989427262 8 25 242 0.972972973 1.556302501 0.135135135 0.296296296 0.486486486 27 1 0 36 2R:22563832-22563903 6 30.5 1309 FBgn0260866 45.33333333 1.52 2.263333333 0.672794118 20.06578947 13.47569956 -7 -7 -7 0.15 dme-miR-1008-3p 7mer-A1 GCTGTGA 2R 22600273 22600279 + 2R_22600273_22600279_+ 0.813201066 0.814013533 0.8136073 0.000574454 CG4269 FBtr0343001|FBtr0071854|FBtr0343000 22600206|22600206|22600206 22600695|22600336|22600336 2R + 22600252 22600305 3'utr CG4269 FlyBase G18424.1 TTCGCGCTCCTGCATGGATTGGCTGTGATAAACCCACTGTATTTATTTAAATTA 252 22600271 0.767058443 10 232 1885 0.927007299 1.404833717 0.00729927 0.079365079 0.153284672 252 11 9 254 2R:22600252-22600305 7 CG4269 FBtr0071854|FBtr0343000|FBtr0343001 22600206|22600206|22600206 22600336|22600336|22600695 GCTGTGA 7mer-A1 dme-miR-1008-3p 2R + 22600252 22600306 3'utr CG4269 FlyBase G14017.1 TTCGCGCTCCTGCATGGATTGGCTGTGATAAACCCACTGTATTTATTTAAATTAT 137 22600271 0.984321713 8 121 972 0.868932039 1.298610522 0.038834951 0.350364964 0.567961165 137 19 8 179 2R:22600252-22600306 7 192.5 1310 FBgn0034741 15.34666667 2.056666667 3.076666667 12.54344049 93.59805511 62.56771398 2 2 2 0.15 dme-miR-263a-5p 7mer-m1 TGCCATT 2R 22641834 22641840 - 2R_22641834_22641840_- 0.655975261 0.763373353 0.709674307 0.075941925 Ugt58Fa FBtr0345505 22641784 22641949 2R - 22641824 22641872 3'utr Ugt58Fa FlyBase G25776.1 AAGAAAAGCTGAATCATCAGAAAGTTGGTTGCTGCCATTCAAGAAAGTC 18 22641847 0.769249744 5 17 120 1 1.301029996 0 0.111111111 0.2 18 0 0 20 2R:22641824-22641872 7 Ugt58Fa FBtr0345505 22641784 22641949 TGCCATT 7mer-m1 dme-miR-263a-5p 2R - 22641829 22641870 3'utr Ugt58Fa FlyBase G19502.1 GAAAAGCTGAATCATCAGAAAGTTGGTTGCTGCCATTCAAGA 9 22641847 0.708573702 4 8 57 1 1.113943352 0.153846154 0.444444444 0.615384615 9 0 0 13 2R:22641829-22641870 7 12.5 1311 FBgn0040091 525 36.25 55.4 0.023809524 0.344827586 0.225631769 7 7 7 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 22672188 22672195 + 2R_22672188_22672195_+ 0.620008627 0.622938049 0.621473338 0.002071399 RYBP FBtr0071868|FBtr0345500 22671942|22671942 22673212|22673212 2R + 22672116 22672213 3'utr RYBP FlyBase G18451.1 AAGCCCCCACTAGTTCATGACTTCCAGCCCAGGCCAAGATGGCAAAGCAAAGCGAAGCGACGGCGAGTCGATTGCATTTACACGACGCTCTCCAAATC 80 22672187 0.918998936 3 76 381 0.96039604 1.50965048 0.257425743 0.225 0.386138614 80 2 2 97 2R:22672116-22672213 8 RYBP FBtr0071868|FBtr0345500 22671942|22671942 22673212|22673212 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 22672165 22672215 3'utr RYBP FlyBase G14033.1 AAGCGAAGCGACGGCGAGTCGATTGCATTTACACGACGCTCTCCAAATCCC 24 22672187 0.97069128 2 23 133 0.95 1.579783597 0.225 0.458333333 0.675 24 2 0 38 2R:22672165-22672215 8 35 1312 FBgn0034763 242.2733333 14.13333333 21.79333333 0.144464929 2.476415094 1.605995717 1 1 1 0.15 dme-miR-999-3p 6mer3-8 AGTTAA 2R 22672429 22672434 + 2R_22672429_22672434_+ 0.909040281 0.892308138 0.900674209 0.011831452 RYBP FBtr0071868|FBtr0345500 22671942|22671942 22673212|22673212 2R + 22672422 22672464 3'utr RYBP FlyBase G18454.1 AAGTGCAAGTTAATCTCAATGTTCCACTAGCAGCGCCCATCCC 13 22672431 0.759341852 5 12 76 0.9375 1.176091259 0.0625 0.230769231 0.375 13 1 0 15 2R:22672422-22672464 6 RYBP FBtr0071868|FBtr0345500 22671942|22671942 22673212|22673212 AGTTAA 6mer3-8 dme-miR-999-3p 2R + 22672422 22672466 3'utr RYBP FlyBase G14036.1 AAGTGCAAGTTAATCTCAATGTTCCACTAGCAGCGCCCATCCCCC 8 22672441 0.971807227 3 8 48 1 0.954242509 0.222222222 0.125 0.222222222 8 0 0 9 2R:22672422-22672466 6 8.5 1313 FBgn0034763 242.2733333 14.13333333 21.79333333 0.03508434 0.601415094 0.390027531 -2 -12 -7 0.15 dme-miR-14-3p 8mer-A1 AAGACTGA 2R 22672600 22672607 + 2R_22672600_22672607_+ 0.643541104 0.643565469 0.643553286 1.73E-05 RYBP FBtr0071868|FBtr0345500 22671942|22671942 22673212|22673212 2R + 22672578 22672695 3'utr RYBP FlyBase G18456.1 TAATTTTAATTTGTTTGTATACAAGACTGATTAAGCGTTACCAACCAGATATAGAGAGGTCCGCACACGCACCCAGCCCGAATCCGATTTTCCTTTTGGTTTACACCCGAGATAGCCT 32 22672609 0.984839309 11 32 254 1 1.556302501 0.222222222 0.125 0.222222222 32 0 0 36 2R:22672578-22672695 8 RYBP FBtr0071868|FBtr0345500 22671942|22671942 22673212|22673212 AAGACTGA 8mer-A1 dme-miR-14-3p 2R + 22672542 22672629 3'utr RYBP FlyBase G14037.1 GAAGAGAGCCACGTAGCTTGGTTGTAGACAATTTGCTAATTTTAATTTGTTTGTATACAAGACTGATTAAGCGTTACCAACCAGATAT 22 22672593 0.991646961 9 17 188 0.806451613 0.795880017 0.096774194 0.318181818 0.516129032 22 3 3 25 2R:22672542-22672629 8 24.5 1314 FBgn0034763 242.2733333 14.13333333 21.79333333 0.101125451 1.733490566 1.124197002 -9 7 -1 0.15 dme-miR-283-5p 8mer-m1 TGATATTT 2R 22685061 22685068 - 2R_22685061_22685068_- 0.423422694 0.344262095 0.383842394 0.055974997 Ppa FBtr0343014 22684953 22687104 2R - 22685006 22685070 3'utr Ppa FlyBase G25789.1 ATTGATATTTCTGTTTTAGGAGGCGCAACCCCCAAAAAATTTGAGCGATACGATGTGGAAGGAGG 12 22685061 0.940690088 5 11 88 0.916666667 1.041392685 0.083333333 0 0 12 1 0 11 2R:22685006-22685070 8 Ppa FBtr0343014 22684953 22687104 TGATATTT 8mer-m1 dme-miR-283-5p 2R - 22685036 22685074 3'utr Ppa FlyBase G19512.1 GACAATTGATATTTCTGTTTTAGGAGGCGCAACCCCCAA 6 22685061 0.994922889 2 4 41 0.777777778 0.84509804 0.666666667 0.333333333 0.555555556 6 2 0 7 2R:22685036-22685074 8 6 1315 FBgn0020257 1130.93 34.32 53.00666667 0.005305368 0.174825175 0.113193309 -7 -7 -7 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 22685402 22685408 - 2R_22685402_22685408_- 0.799799134 0.795436547 0.797617841 0.003084824 Ppa FBtr0343014|FBtr0343014|FBtr0343014 22684953|22684953|22684953 22687104|22687104|22687104 2R - 22685364 22685457 3'utr Ppa FlyBase G25792.1 AGAGAAGGTAACGATTGAAAAGAATACGCGAATTAATTCTTTTTTCTATTGTGATATAAAATGTATTGTATAAAAAAGAACACATAAGCAAGCA 60 22685409 0.993571404 13 51 628 0.844155844 0.967815317 0.064935065 0.233333333 0.402597403 60 6 6 65 2R:22685364-22685457 7 Ppa FBtr0343014|FBtr0343014|FBtr0343014 22684953|22684953|22684953 22687104|22687104|22687104 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 22685361 22685457 3'utr Ppa FlyBase G19514.1 AGAGAAGGTAACGATTGAAAAGAATACGCGAATTAATTCTTTTTTCTATTGTGATATAAAATGTATTGTATAAAAAAGAACACATAAGCAAGCAGCA 49 22685409 0.984489713 12 45 482 0.905405405 1.047923552 0.094594595 0.408163265 0.608108108 49 2 5 67 2R:22685361-22685457 7 41.5 1316 FBgn0020257 1130.93 34.32 53.00666667 0.036695463 1.209207459 0.782920387 1 1 1 0.15 dme-miR-34-5p 6mer2-7 ACTGCC 2R 22692827 22692832 - 2R_22692827_22692832_- 0.998763788 0.99848665 0.998625219 0.000195939 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 2R - 22692787 22692854 3'utr robo FlyBase G25801.1 GAAACCAACTTGCTTGAGTTGAACTGCCCTTCCGTAGCCATATACATATAGAGAAAGCATAGTTGGGT 124 22692825 0.762779106 9 123 868 0.993421053 1.877946952 0.25 0.185483871 0.335526316 124 0 1 151 2R:22692787-22692854 6 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 ACTGCC 6mer2-7 dme-miR-34-5p 2R - 22692766 22692854 3'utr robo FlyBase G19522.1 GAAACCAACTTGCTTGAGTTGAACTGCCCTTCCGTAGCCATATACATATAGAGAAAGCATAGTTGGGTCTGGGTTTTAATAATTAGCAA 83 22692825 0.977956071 10 82 558 0.991735537 1.77815125 0.214876033 0.361445783 0.561983471 83 0 1 120 2R:22692766-22692854 6 96.5 1317 FBgn0005631 940.4766667 16.89666667 25.92333333 0.102607543 5.711185638 3.722515109 -7 -7 -7 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2R 22693464 22693471 - 2R_22693464_22693471_- 0.572600296 0.562219339 0.567409818 0.007340475 robo FBtr0343013|FBtr0343013|FBtr0343013|FBtr0071922|FBtr0071922|FBtr0071922 22692522|22692522|22692522|22692522|22692522|22692522 22694552|22694552|22694552|22694552|22694552|22694552 2R - 22693422 22693574 3'utr robo FlyBase G25805.1 CGAACCAACCCCAGTTGTCCGTTCCGTTGTCCTGTCCCTGTGCAGATCCCTCCAAGACACAATGTTTTCTACAATCTTGCATTTTGAAAAGTCTAAAATGTACCTGTGATATAACCCCATTATACATTATAGTATTTTAATAATTTTTATATT 358 22693475 0.98091123 24 335 2417 0.934831461 2.619093331 0.139325843 0.187150838 0.346067416 358 29 0 416 2R:22693422-22693574 8 robo FBtr0343013|FBtr0343013|FBtr0343013|FBtr0071922|FBtr0071922|FBtr0071922 22692522|22692522|22692522|22692522|22692522|22692522 22694552|22694552|22694552|22694552|22694552|22694552 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 22693434 22693572 3'utr robo FlyBase G19525.1 AACCAACCCCAGTTGTCCGTTCCGTTGTCCTGTCCCTGTGCAGATCCCTCCAAGACACAATGTTTTCTACAATCTTGCATTTTGAAAAGTCTAAAATGTACCTGTGATATAACCCCATTATACATTATAGTATTTTAAT 205 22693476 0.980634727 17 190 1353 0.918918919 1.957447649 0.094594595 0.326829268 0.533783784 205 22 2 272 2R:22693434-22693572 8 246.5 1318 FBgn0005631 940.4766667 16.89666667 25.92333333 0.262101133 14.58867627 9.508808024 4 5 4.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2R 22693884 22693890 - 2R_22693884_22693890_- 0.822992515 0.823338255 0.823165385 0.000244518 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 2R - 22693859 22693950 3'utr robo FlyBase G25807.1 TGTAGTTAGAACCAAAGTACACCATTTGTACAGCATGTTTTGGGGGCTTTTGAATCGGTCCTAGTCAATAGGCTTGATAGCGATACAATACG 46 22693882 0.980837236 9 43 315 0.967213115 1.770852012 0.229508197 0.260869565 0.442622951 46 2 0 59 2R:22693859-22693950 7 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R - 22693870 22693925 3'utr robo FlyBase G19528.1 TTGTACAGCATGTTTTGGGGGCTTTTGAATCGGTCCTAGTCAATAGGCTTGATAGC 19 22693910 0.743677599 7 18 163 0.961538462 1.096910013 0.076923077 0.315789474 0.5 19 0 1 25 2R:22693870-22693925 7 21.5 1319 FBgn0005631 940.4766667 16.89666667 25.92333333 0.022860748 1.272440324 0.829368651 -8 20 6 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 22694136 22694143 - 2R_22694136_22694143_- 0.500051859 0.500063556 0.500057707 8.27E-06 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 2R - 22694112 22694297 3'utr robo FlyBase G25808.1 ACTTGTCACAATCATGGGGGCATTGTGCAGCTTTAGCAATTACGAATTTTTCCATTATCACATCTACCAGCGTAGAGACTCATAGACAGGCACAGTGCCCCTTCCCCATCCATGCACCACAGAAATGTTTCCCCAATGGGAAACGAGAACCTTTGTACTTAAGAGACGCGAGTGCTGTACGATAGA 368 22694144 0.961475004 18 354 1902 0.954545455 1.998912904 0.277511962 0.116847826 0.222488038 368 16 3 399 2R:22694112-22694297 8 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 GTACTTAA 8mer-A1 dme-miR-252-5p 2R - 22694116 22694168 3'utr robo FlyBase G19530.1 TCCCCAATGGGAAACGAGAACCTTTGTACTTAAGAGACGCGAGTGCTGTACGA 144 22694144 0.648028922 7 141 760 0.957345972 2.305351369 0.383886256 0.354166667 0.559241706 144 9 0 202 2R:22694116-22694168 8 188.5 1320 FBgn0005631 940.4766667 16.89666667 25.92333333 0.200430278 11.15604656 7.27144143 1 1 1 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 22694494 22694500 - 2R_22694494_22694500_- 0.661594821 0.661538869 0.661566845 3.95E-05 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 2R - 22694421 22694528 3'utr robo FlyBase G25809.1 AATAGGGGGATTAGGATTAAAGATAGCATCTAGTCTAACTCTTCATTCATATCGAACTGGAAATCAGTCTAGGAACTGAGTGAACTCAAAGTTTCTGCATCAGTTATC 53 22694500 0.981465663 10 51 372 0.951612903 1.770852012 0.112903226 0.150943396 0.274193548 53 3 0 59 2R:22694421-22694528 7 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R - 22694467 22694516 3'utr robo FlyBase G19532.1 AGGATTAAAGATAGCATCTAGTCTAACTCTTCATTCATATCGAACTGGAA 22 22694500 0.721435469 4 17 127 0.793103448 1.06069784 0.068965517 0.227272727 0.413793103 22 5 1 23 2R:22694467-22694516 7 32 1321 FBgn0005631 940.4766667 16.89666667 25.92333333 0.034025299 1.893864668 1.234409155 0 0 0 0.15 dme-miR-92b-3p 8mer-m1 GTGCAATT 2R 22801729 22801736 + 2R_22801729_22801736_+ 0.596698332 0.590867804 0.593783068 0.004122786 blw FBtr0071883 22801691 22802180 2R + 22801691 22801754 stop_codon blw FlyBase G18466.1 AAGCATCAGCAGCAAACGAAGAATAGGAGTAGCGGTGCGTGCAATTAACATCATAGATGGCTCG 21 22801744 0.753714101 6 20 116 0.962962963 1.414973348 0.37037037 0.238095238 0.407407407 21 1 0 26 2R:22801691-22801754 8 blw FBtr0071883 22801691 22802180 GTGCAATT 8mer-m1 dme-miR-92b-3p 2R + 22801709 22801752 3'utr blw FlyBase G14049.1 AAGAATAGGAGTAGCGGTGCGTGCAATTAACATCATAGATGGCT 12 22801744 0.91427173 4 11 68 0.944444444 1.230448921 0.055555556 0.333333333 0.555555556 12 1 0 17 2R:22801709-22801752 8 15 1322 FBgn0011211 3676.656667 198.3566667 303.6133333 0.004079794 0.075621355 0.049404945 -15 -15 -15 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2R 22804138 22804143 - 2R_22804138_22804143_- 0.998308289 0.998722358 0.998515324 0.000292813 CycB FBtr0309858|FBtr0071911|FBtr0071913|FBtr0071914 22803519|22803519|22803519|22803519 22804293|22804293|22804293|22804293 2R - 22804123 22804179 3'utr CycB FlyBase G25819.1 GCGTATAGTTACCGTAGTCGCATTGCCAACTATCTTTACCTGCATCACCCATCCCTA 51 22804145 0.653371247 8 50 382 0.984615385 1.505149978 0.061538462 0.196078431 0.369230769 51 0 1 64 2R:22804123-22804179 6 CycB FBtr0309858|FBtr0071911|FBtr0071913|FBtr0071914 22803519|22803519|22803519|22803519 22804293|22804293|22804293|22804293 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2R - 22804124 22804167 3'utr CycB FlyBase G19540.1 CGTAGTCGCATTGCCAACTATCTTTACCTGCATCACCCATCCCT 32 22804145 0.632276229 5 27 222 0.844444444 0.880813592 0.088888889 0.34375 0.533333333 32 3 4 38 2R:22804124-22804167 6 38 1323 FBgn0000405 1807.483333 83.51333333 128.11 0.021023707 0.455017163 0.296620092 2 2 2 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 2R 22931818 22931824 + 2R_22931818_22931824_+ 0.521218385 0.521169707 0.521194046 3.44E-05 CG42678 FBtr0345078|FBtr0302769|FBtr0302773|FBtr0345077|FBtr0302768|FBtr0344190|FBtr0302772|FBtr0345079|FBtr0302770|FBtr0302771 22931633|22931278|22931633|22931533|22929536|22931533|22931278|22931633|22931278|22931278 22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044 2R + 22931806 22931843 3'utr CG42678 FlyBase G18491.1 GTGTACTTTGTTTGTGATTCTATTAGAGCTCCGGGCGC 17 22931816 0.618590426 8 16 176 0.818181818 1.255272505 0.181818182 0.176470588 0.363636364 17 4 0 18 2R:22931806-22931843 7 CG42678 FBtr0345077|FBtr0302773|FBtr0302769|FBtr0345078|FBtr0302770|FBtr0302771|FBtr0302772|FBtr0345079|FBtr0344190|FBtr0302768 22931533|22931633|22931278|22931633|22931278|22931278|22931278|22931633|22931533|22929536 22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044 TGTGATT 7mer-m1 dme-miR-308-3p 2R + 22931806 22931826 3'utr CG42678 FlyBase G14067.1 GTGTACTTTGTTTGTGATTCT 5 22931817 0.657456855 3 5 55 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2R:22931806-22931826 7 10.5 1324 FBgn0261564 564.6666667 33.59333333 51.19333333 0.018595041 0.312562016 0.205104831 2 1 1.5 0.15 dme-miR-1012-3p 6mer2-7 TGACTA 2R 22931877 22931882 + 2R_22931877_22931882_+ 0.985677981 0.999999944 0.992838963 0.010127113 CG42678 FBtr0345078|FBtr0302769|FBtr0302773|FBtr0345077|FBtr0302768|FBtr0344190|FBtr0302772|FBtr0345079|FBtr0302770|FBtr0302771 22931633|22931278|22931633|22931533|22929536|22931533|22931278|22931633|22931278|22931278 22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044 2R + 22931847 22931898 3'utr CG42678 FlyBase G18492.1 TCGTCCTGGTTGCCACTGGTACTCATTTCGTGACTAGTTTAGCGTTAAGCGA 7 22931872 0.988352294 3 7 64 1 0.84509804 0 0 0 7 0 0 7 2R:22931847-22931898 6 CG42678 FBtr0345077|FBtr0302773|FBtr0302769|FBtr0345078|FBtr0302770|FBtr0302771|FBtr0302772|FBtr0345079|FBtr0344190|FBtr0302768 22931533|22931633|22931278|22931633|22931278|22931278|22931278|22931633|22931533|22929536 22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044 TGACTA 6mer2-7 dme-miR-1012-3p 2R + 22931846 22931897 3'utr CG42678 FlyBase G14068.1 TTCGTCCTGGTTGCCACTGGTACTCATTTCGTGACTAGTTTAGCGTTAAGCG 7 22931872 0.987490085 5 6 55 1 1.079181246 0.333333333 0.571428571 0.75 7 0 0 12 2R:22931846-22931897 6 5.5 1325 FBgn0261564 564.6666667 33.59333333 51.19333333 0.00974026 0.163722961 0.107435864 5 5 5 0.15 dme-miR-308-3p 8mer-m1 CTGTGATT 2R 22934614 22934621 - 2R_22934614_22934621_- 0.385560641 0.385502843 0.385531742 4.09E-05 CG3800 FBtr0071994|FBtr0303464 22934567|22934567 22936014|22936014 2R - 22934560 22934651 3'utr CG3800 FlyBase G25898.1 ACGATGAAGGAAATGAAAATTCAAATATCACTGTGATTGTTTTTTAATTGTAAATTAAAATGCTGGAGCTGCTGATTTGAGACAAAAAAAAA 107 22934614 0.985027004 20 98 1119 0.906976744 1.767155866 0.046511628 0.158878505 0.302325581 107 11 1 117 2R:22934560-22934651 8 CG3800 FBtr0071994|FBtr0303464 22934567|22934567 22936014|22936014 CTGTGATT 8mer-m1 dme-miR-308-3p 2R - 22934570 22934638 3'utr CG3800 FlyBase G19600.1 TGAAAATTCAAATATCACTGTGATTGTTTTTTAATTGTAAATTAAAATGCTGGAGCTGCTGATTTGAGA 60 22934614 0.991282586 8 58 624 0.990291262 2.008600172 0.029126214 0.516666667 0.718446602 60 1 0 102 2R:22934570-22934638 8 74 1326 FBgn0034802 11327.54667 555.1 855.97 0.006532747 0.133309314 0.086451628 -7 -7 -7 0.15 dme-miR-1006-3p 7mer-A1 GAATTTA 2R 22935330 22935336 - 2R_22935330_22935336_- 0.823349562 0.823349477 0.823349519 7.07E-08 CG3800 FBtr0071994|FBtr0303464 22934567|22934567 22936014|22936014 2R - 22935271 22935378 5'utr CG3800 FlyBase G25903.1 TAATTATACCTATATGATTATATGATTATGCTGCAAGTGTTTGAATTTACTAATTACATTATAACGAATGGAATGAAACTATATAAGATTATATAAAGAAAAATACCT 26 22935338 0.986494315 16 23 195 0.892857143 1.397940009 0.178571429 0.076923077 0.142857143 26 3 0 25 2R:22935271-22935378 7 CG3800 FBtr0071994|FBtr0303464 22934567|22934567 22936014|22936014 GAATTTA 7mer-A1 dme-miR-1006-3p 2R - 22935312 22935372 5'utr CG3800 FlyBase G19604.2 TACCTATATGATTATATGATTATGCTGCAAGTGTTTGAATTTACTAATTACATTATAACGA 19 22935339 0.901070562 9 14 164 0.84375 0.954242509 0.28125 0.578947368 0.75 19 3 2 27 2R:22935312-22935372 7 12.5 1327 FBgn0034802 11327.54667 555.1 855.97 0.001103505 0.022518465 0.014603316 2 3 2.5 0.15 dme-miR-2a-2-5p 7mer-A1 GATGAGA 2R 22935431 22935437 - 2R_22935431_22935437_- 0.782679084 0.782450029 0.782564556 0.000161998 CG3800 FBtr0071994|FBtr0303464 22934567|22934567 22936014|22936014 2R - 22935405 22935548 5'utr CG3800 FlyBase G25904.1 AGAAGACGATAGCCAACGGCAGCTGTGCAGCCGAGAGAGCAGATGACACCGACGACGAGGAAGAGGATGAGGTAGAAGATGAGGAAGAAGACACGACGACCCAATTTGTAAGATGAGACTAAACCACAACAGCAACAACAAAAG 363 22935435 0.938356045 12 352 1369 0.96912114 2.309630167 0.104513064 0.14600551 0.263657957 363 12 1 408 2R:22935405-22935548 7 CG3800 FBtr0071994|FBtr0303464 22934567|22934567 22936014|22936014 GATGAGA 7mer-A1 dme-miR-2a-2-5p 2R - 22935394 22935548 5'utr CG3800 FlyBase G19605.1 AGAAGACGATAGCCAACGGCAGCTGTGCAGCCGAGAGAGCAGATGACACCGACGACGAGGAAGAGGATGAGGTAGAAGATGAGGAAGAAGACACGACGACCCAATTTGTAAGATGAGACTAAACCACAACAGCAACAACAAAAGAAATCACCAAG 241 22935435 0.930028914 11 233 846 0.971910112 2.539076099 0.070224719 0.340248963 0.553370787 241 10 0 346 2R:22935394-22935548 7 284 1328 FBgn0034802 11327.54667 555.1 855.97 0.025071625 0.511619528 0.331787329 -2 -2 -2 0.15 dme-miR-980-3p 6mer2-7 GCAGCT 2R 22938801 22938806 + 2R_22938801_22938806_+ 0.999017557 0.999918056 0.999467806 0.00063675 CG9849 FBtr0302895|FBtr0071951 22938783|22938783 22939025|22939025 2R + 22938764 22938822 stop_codon CG9849 FlyBase G18494.1 CCGCCGTGGCTGGGCTGGTGACGTGATCGGATTACATGCAGCTCAAAGGACTCGTGTGA 22 22938800 0.857419269 5 21 132 0.958333333 1.361727836 0.208333333 0.090909091 0.166666667 22 1 0 23 2R:22938764-22938822 6 CG9849 FBtr0302895|FBtr0071951 22938783|22938783 22939025|22939025 GCAGCT 6mer2-7 dme-miR-980-3p 2R + 22938779 22938822 stop_codon CG9849 FlyBase G14069.1 TGGTGACGTGATCGGATTACATGCAGCTCAAAGGACTCGTGTGA 9 22938800 0.785550638 3 9 48 1 1.322219295 0.238095238 0.777777778 0.904761905 9 0 0 21 2R:22938779-22938822 6 14.5 1329 FBgn0034803 110.3333333 14.92666667 22.72333333 0.13141994 0.971415811 0.638110606 1 1 1 0.15 dme-miR-8-3p 6mer2-7 AGTATT 2R 23061899 23061904 - 2R_23061899_23061904_- 0.835448546 0.483813033 0.659630789 0.248643847 l(2)06496 FBtr0336732|FBtr0071985 23061418|23061418 23061931|23061931 2R - 23061894 23061937 stop_codon l(2)06496 FlyBase G25914.1 GATTGAGCGGATATAGATCCAAAGACTGCTGAAAGTATTTTATA 36 23061908 0.766403908 8 34 163 0.951219512 1.290034611 0.292682927 0.138888889 0.243902439 36 1 1 39 2R:23061894-23061937 6 l(2)06496 FBtr0071985 23061418 23061931 AGTATT 6mer2-7 dme-miR-8-3p 2R - 23061881 23061933 stop_codon l(2)06496 FlyBase G19613.1 GAGCGGATATAGATCCAAAGACTGCTGAAAGTATTTTATACGACCCCGTTTCC 29 23061908 0.966433693 6 24 127 0.76744186 0.6734159 0.279069767 0.344827586 0.558139535 29 4 6 33 2R:23061881-23061933 6 19.5 1330 FBgn0010622 174.3333333 19.28333333 29.72666667 0.111854685 1.011235955 0.655976676 4 4 4 0.15 dme-bantam-3p 6mer3-8 TGATCT 2R 23071694 23071699 + 2R_23071694_23071699_+ 0.999999192 0.999999445 0.999999319 1.41E-07 l(2)k09913 FBtr0071960|FBtr0343188|FBtr0343192|FBtr0071959|FBtr0343191|FBtr0071961|FBtr0343189|FBtr0343190|FBtr0071958 23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554 23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875 2R + 23071539 23071725 stop_codon l(2)k09913 FlyBase G18510.1 AGCGCGCCAAGTTGTAGGTGTCTCTAACGAGGAGCGGCTGATCAGTTCAGTGATATACATTTATTCAAGAATCAATGCGATTATGATTTTACCCTAGTTGCTAAGACCTAAAGATTAACGAGCAATGTAAAACCAATGTCCTCTTTGAATGATTATGATCTGTGTGTCTCTCGCGAGGCAGAATCTT 284 23071694 0.986472032 37 272 2343 0.964391691 2.034762106 0.228486647 0.151408451 0.284866469 284 10 2 325 2R:23071539-23071725 6 l(2)k09913 FBtr0071961|FBtr0343191|FBtr0343190|FBtr0071958|FBtr0343189|FBtr0343188|FBtr0071960|FBtr0071959|FBtr0343192 23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554 23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875 TGATCT 6mer3-8 dme-bantam-3p 2R + 23071564 23071722 3'utr l(2)k09913 FlyBase G14081.1 AACGAGGAGCGGCTGATCAGTTCAGTGATATACATTTATTCAAGAATCAATGCGATTATGATTTTACCCTAGTTGCTAAGACCTAAAGATTAACGAGCAATGTAAAACCAATGTCCTCTTTGAATGATTATGATCTGTGTGTCTCTCGCGAGGCAGAAT 168 23071694 0.893394118 23 159 1351 0.940677966 2.346352974 0.266949153 0.297619048 0.5 168 14 0 222 2R:23071564-23071722 6 112 1331 FBgn0021979 722.6 59.48666667 89.72333333 0.154995848 1.882774852 1.248281755 0 0 0 0.15 dme-miR-304-5p 6mer3-8 TGAGAT 2R 23071823 23071828 + 2R_23071823_23071828_+ 0.999226425 0.998906016 0.99906622 0.000226557 l(2)k09913 FBtr0071960|FBtr0343188|FBtr0343192|FBtr0071959|FBtr0343191|FBtr0071961|FBtr0343189|FBtr0343190|FBtr0071958 23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554 23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875 2R + 23071771 23071849 3'utr l(2)k09913 FlyBase G18511.1 TTCATCAACCGAGAGAAGAATGCACTACGCCTCTATATTGTTACATATATTTTGAGATCGCTGCAAAACAGCTAAATAA 23 23071822 0.972095263 4 23 141 1 1.431363764 0.185185185 0.130434783 0.259259259 23 0 0 27 2R:23071771-23071849 6 l(2)k09913 FBtr0071961|FBtr0343191|FBtr0343190|FBtr0071958|FBtr0343189|FBtr0343188|FBtr0071960|FBtr0071959|FBtr0343192 23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554 23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875 TGAGAT 6mer3-8 dme-miR-304-5p 2R + 23071807 23071848 3'utr l(2)k09913 FlyBase G14083.1 ATTGTTACATATATTTTGAGATCGCTGCAAAACAGCTAAATA 14 23071822 0.703581161 3 13 108 0.95 1.278753601 0 0.428571429 0.6 14 1 0 19 2R:23071807-23071848 6 13.5 1332 FBgn0021979 722.6 59.48666667 89.72333333 0.018682535 0.226941612 0.150462533 1 1 1 0.15 dme-bantam-3p 7mer-m8 TGATCTC 2R 23355188 23355194 + 2R_23355188_23355194_+ 0.583169028 0.55804485 0.570606939 0.017765421 CG30409 FBtr0072004|FBtr0305674 23354922|23354922 23355321|23355321 2R + 23355169 23355208 5'utr CG30409 FlyBase G18522.1 AAATCCCGCACCGGCGGCTTGATCTCTGTGACATTGAAGT 14 23355187 0.790699754 3 13 80 0.9375 1.176091259 0.25 0.142857143 0.25 14 1 0 15 2R:23355169-23355208 7 CG30409 FBtr0305674|FBtr0072004 23354922|23354922 23355321|23355321 TGATCTC 7mer-m8 dme-bantam-3p 2R + 23355170 23355200 5'utr CG30409 FlyBase G14091.1 AATCCCGCACCGGCGGCTTGATCTCTGTGAC 11 23355187 0.71377672 3 11 58 1 1.255272505 0.722222222 0.545454545 0.722222222 11 0 0 18 2R:23355170-23355200 7 12.5 1333 FBgn0050409 2.333333333 0.296666667 0.423333333 5.357142857 42.13483146 29.52755906 1 1 1 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 23356109 23356116 + 2R_23356109_23356116_+ 0.625339546 0.625350824 0.625345185 7.99E-06 Rpi FBtr0301852|FBtr0305675 23356078|23356078 23356192|23356441 2R + 23356082 23356152 3'utr Rpi FlyBase G18526.1 CTTGGGCGGAGTTGGGGGAGCGCTTTTTGCATTTATGTTTCACCAAGTTGTTCCTTAAATTTTAGGTTTGC 41 23356108 0.74232017 10 41 406 1 1.698970004 0.08 0.195121951 0.34 41 0 0 50 2R:23356082-23356152 8 Rpi FBtr0305675 23356078 23356441 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 23356078 23356153 stop_codon Rpi FlyBase G14095.1 AGTTCTTGGGCGGAGTTGGGGGAGCGCTTTTTGCATTTATGTTTCACCAAGTTGTTCCTTAAATTTTAGGTTTGCC 41 23356108 0.736360172 10 40 419 1 1.785329835 0.098360656 0.317073171 0.540983607 41 0 0 61 2R:23356078-23356153 8 27 1334 FBgn0050410 217.7933333 24.45 37.62 0.123970737 1.104294479 0.717703349 1 1 1 0.15 dme-miR-968-5p 6mer2-7 CTACTT 2R 23371601 23371606 - 2R_23371601_23371606_- 0.947528364 0.950693656 0.94911101 0.002238205 Golgin245 FBtr0072036 23371358 23371842 2R - 23371447 23371614 3'utr Golgin245 FlyBase G25951.1 AAGTATAGCTACTTCTGTCCAAATCCACGCTAAGCACTTTTGTACATTTTGATTACGCTTTCCTTTGTTTCATTCACTTGCTTGCGCTCCATGTCCCATGTCCACGACTTACCTTAACCCCAGCCTAACCTAAGTGCAATCGTTTTGTGTATTTTAGTTGTAAGTTTA 334 23371602 0.850153201 24 329 2448 0.985185185 2.2999429 0.111111111 0.173652695 0.318518519 334 5 1 399 2R:23371447-23371614 6 Golgin245 FBtr0072036 23371358 23371842 CTACTT 6mer2-7 dme-miR-968-5p 2R - 23371485 23371615 3'utr Golgin245 FlyBase G19638.1 TAAGTATAGCTACTTCTGTCCAAATCCACGCTAAGCACTTTTGTACATTTTGATTACGCTTTCCTTTGTTTCATTCACTTGCTTGCGCTCCATGTCCCATGTCCACGACTTACCTTAACCCCAGCCTAACC 179 23371602 0.897360209 14 179 1190 1 2.456366033 0.059440559 0.430167598 0.643356643 179 0 0 286 2R:23371485-23371615 6 200 1335 FBgn0034854 1865.833333 44.14333333 67.57666667 0.10719071 4.530695462 2.95960144 -4 -4 -4 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 2R 23389315 23389320 - 2R_23389315_23389320_- 0.670759064 0.999995891 0.835377477 0.232805574 CG3530 FBtr0112940|FBtr0072028|FBtr0072029 23389007|23389007|23389007 23389520|23389520|23389520 2R - 23389282 23389351 3'utr CG3530 FlyBase G25973.1 ATCCACCAGCGATTGGCTTCCAGGCATCGTCCTAGTCTATAAGCCGGGCACAAAACTGTATTTTGTTATT 7 23389339 0.965256377 4 7 40 1 0.954242509 0.111111111 0.142857143 0.333333333 7 0 0 9 2R:23389282-23389351 6 CG3530 FBtr0072029|FBtr0112940|FBtr0072028 23389007|23389007|23389007 23389520|23389520|23389520 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 2R - 23389271 23389344 3'utr CG3530 FlyBase G19656.1 AGCGATTGGCTTCCAGGCATCGTCCTAGTCTATAAGCCGGGCACAAAACTGTATTTTGTTATTAGAATCTAGAG 12 23389314 0.975351629 7 12 75 1 1.146128036 0.285714286 0.166666667 0.285714286 12 0 0 14 2R:23389271-23389344 6 7.5 1336 FBgn0028497 778.9933333 33.31 50.96666667 0.00962781 0.22515761 0.147155003 19 -6 6.5 0.15 dme-miR-1003-3p 6mer3-8 ATGTGA 2R 23421617 23421622 - 2R_23421617_23421622_- 0.747772689 0.614629802 0.681201245 0.094146247 CG9815 FBtr0072024|FBtr0113111|FBtr0343264|FBtr0343263 23421519|23421519|23421519|23421519 23421708|23421708|23421708|23421708 2R - 23421522 23421688 3'utr CG9815 FlyBase G25981.1 AGTAGTTGTGCGTGAATGTTGTAATTTCTGTCAGTGTATGTGCATTTTGACCCTTGTGATATATGTATGTGACTTTGCTGTAAGCCTAGACTAAGGATATTTATGTCCAGCCACAAGAAAATTCCAAAAAAATATTAGAATGTAGAATAAATGTTATGTGTAAAATC 617 23421615 0.964558232 35 572 5619 0.918421053 1.889612913 0.269736842 0.183144246 0.336842105 617 54 8 698 2R:23421522-23421688 6 CG9815 FBtr0343264|FBtr0343263|FBtr0072024|FBtr0113111 23421519|23421519|23421519|23421519 23421708|23421708|23421708|23421708 ATGTGA 6mer3-8 dme-miR-1003-3p 2R - 23421588 23421688 3'utr CG9815 FlyBase G19659.2 AGTAGTTGTGCGTGAATGTTGTAATTTCTGTCAGTGTATGTGCATTTTGACCCTTGTGATATATGTATGTGACTTTGCTGTAAGCCTAGACTAAGGATATT 441 23421615 0.72630689 27 401 4102 0.911504425 1.790988475 0.315634218 0.410430839 0.616519174 441 51 9 618 2R:23421588-23421688 6 346 1337 FBgn0034861 0 0 0 Inf Inf Inf -7 -7 -7 0.15 dme-miR-14-3p 6mer3-8 AAGACT 2R 23491136 23491141 + 2R_23491136_23491141_+ 0.997244521 0.97323609 0.985240306 0.016976502 CG43795 FBtr0331989 23490922 23491997 2R + 23491100 23491158 3'utr CG43795 FlyBase G18552.1 CGAAAATGTTTTATGCTTAGGCCAGTTGAATTATCAAAGACTTTACTAAATTATATTTG 21 23491143 0.984930478 9 20 163 0.962962963 1.414973348 0.185185185 0.238095238 0.407407407 21 1 0 26 2R:23491100-23491158 6 CG43795 FBtr0331989 23490922 23491997 AAGACT 6mer3-8 dme-miR-14-3p 2R + 23491096 23491157 3'utr CG43795 FlyBase G14108.1 CAATCGAAAATGTTTTATGCTTAGGCCAGTTGAATTATCAAAGACTTTACTAAATTATATTT 18 23491144 0.984776396 6 18 149 1 1.380211242 0.041666667 0.222222222 0.416666667 18 0 0 24 2R:23491096-23491157 6 17.5 1338 FBgn0264339 32.66666667 0.67 1.033333333 0.535714286 26.11940299 16.93548387 -7 -8 -7.5 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 2R 23519884 23519890 - 2R_23519884_23519890_- 0.689132088 0.778975094 0.734053591 0.063528595 RabX1 FBtr0072120 23519837 23520357 2R - 23519848 23519910 3'utr RabX1 FlyBase G25992.1 TAACACAAACACCAATTCATGTACAAAGCATTTTATACTGCATGCCTATAATAAATGTAAATG 15 23519895 0.953792759 4 15 71 1 1.255272505 0 0.133333333 0.277777778 15 0 0 18 2R:23519848-23519910 7 RabX1 FBtr0072120 23519837 23520357 GTACAAA 7mer-A1 dme-miR-305-5p 2R - 23519852 23519906 3'utr RabX1 FlyBase G19668.1 ACAAACACCAATTCATGTACAAAGCATTTTATACTGCATGCCTATAATAAATGTA 10 23519894 0.923300996 6 10 45 1 1.176091259 0 0.2 0.466666667 10 0 0 15 2R:23519852-23519906 7 11 1339 FBgn0015372 359.1933333 26.49333333 40.52 0.030624176 0.415198792 0.271470879 5 4 4.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 23520325 23520330 - 2R_23520325_23520330_- 0.941282035 0.872531305 0.90690667 0.048614086 RabX1 FBtr0072120|FBtr0072120|FBtr0072120 23519837|23519837|23519837 23520357|23520357|23520357 2R - 23520282 23520358 stop_codon RabX1 FlyBase G25994.1 AGATCTATCAGATCCCCAGGATCCACATCTGTGAAAGAACCAATGTGATTTTAACAGAACCAGACTGCAGTTCGAAT 103 23520331 0.784510395 9 101 434 1 2.064457989 0.25 0.106796117 0.206896552 103 0 0 116 2R:23520282-23520358 6 RabX1 FBtr0072120|FBtr0072120|FBtr0072120 23519837|23519837|23519837 23520357|23520357|23520357 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 23520274 23520352 3'utr RabX1 FlyBase G19671.1 ATCAGATCCCCAGGATCCACATCTGTGAAAGAACCAATGTGATTTTAACAGAACCAGACTGCAGTTCGAATATGGGCTC 80 23520331 0.943054685 11 80 352 1 2.113943352 0.192307692 0.4375 0.653846154 80 0 0 130 2R:23520274-23520352 6 72.5 1340 FBgn0015372 359.1933333 26.49333333 40.52 0.201841163 2.736537494 1.789239882 1 1 1 0.15 dme-miR-33-5p 8mer-A1 CAATGCAA 2R 23528178 23528185 + 2R_23528178_23528185_+ 0.634058798 0.634473143 0.634265971 0.000292954 mi FBtr0072058 23527637 23528260 2R + 23528153 23528205 3'utr mi FlyBase G18577.1 TTTACTTAACTACCGCACGAGTACTCAATGCAACTGAAATTAAGCTGAAGCAA 27 23528177 0.752974174 8 26 134 0.96969697 1.505149978 0.393939394 0.185185185 0.333333333 27 1 0 32 2R:23528153-23528205 8 mi FBtr0072058 23527637 23528260 CAATGCAA 8mer-A1 dme-miR-33-5p 2R + 23528160 23528199 3'utr mi FlyBase G14126.1 AACTACCGCACGAGTACTCAATGCAACTGAAATTAAGCTG 23 23528177 0.666945338 7 22 80 0.967741935 1.477121255 0.258064516 0.304347826 0.483870968 23 1 0 30 2R:23528160-23528199 8 25 1341 FBgn0261786 586.8166667 18.49 28.43 0.042602744 1.352082207 0.879352796 1 1 1 0.15 dme-miR-33-5p 7mer-A1 AATGCAA 2R 23544848 23544854 - 2R_23544848_23544854_- 0.779696112 0.781886464 0.780791288 0.001548847 wmd FBtr0113112|FBtr0072114 23544821|23544821 23545063|23545063 2R - 23544832 23544920 3'utr wmd FlyBase G25995.1 TATTCCAACGCTGAACTCTCTCATTGGCATTAAATGATAATCACAACACACAAAACTACATTGTGAAATGCAATAGAAATAAATAACTT 42 23544860 0.838011463 8 40 220 0.963636364 1.423245874 0.127272727 0.238095238 0.418181818 42 1 1 53 2R:23544832-23544920 7 wmd FBtr0113112|FBtr0072114 23544821|23544821 23545063|23545063 AATGCAA 7mer-A1 dme-miR-33-5p 2R - 23544832 23544921 3'utr wmd FlyBase G19673.1 ATATTCCAACGCTGAACTCTCTCATTGGCATTAAATGATAATCACAACACACAAAACTACATTGTGAAATGCAATAGAAATAAATAACTT 29 23544860 0.713735031 9 29 152 1 1.681241237 0.104166667 0.448275862 0.666666667 29 0 0 48 2R:23544832-23544921 7 21 1342 FBgn0034876 541.5 41.29666667 63.21666667 0.038781163 0.508515619 0.332190878 6 6 6 0.15 dme-miR-8-3p 7mer-m8 CAGTATT 2R 23598763 23598769 + 2R_23598763_23598769_+ 0.661614406 0.661609737 0.661612072 3.32E-06 apt FBtr0072069|FBtr0072067|FBtr0332926|FBtr0072068|FBtr0072066|FBtr0072070 23598526|23598526|23598526|23598526|23598526|23598526 23599526|23599526|23599526|23599526|23599526|23599526 2R + 23598741 23598784 3'utr apt FlyBase G18592.1 AGACATTCCTGGCATTGTTGATCAGTATTTGAAAGCTAGAAGCG 10 23598761 0.725171402 4 10 98 1 1 0.5 0 0 10 0 0 10 2R:23598741-23598784 7 apt FBtr0072066|FBtr0072070|FBtr0332926|FBtr0072068|FBtr0072069|FBtr0072067 23598526|23598526|23598526|23598526|23598526|23598526 23599526|23599526|23599526|23599526|23599526|23599526 CAGTATT 7mer-m8 dme-miR-8-3p 2R + 23598749 23598775 3'utr apt FlyBase G14139.1 CTGGCATTGTTGATCAGTATTTGAAAG 8 23598762 0.730993826 2 6 60 0.75 0.954242509 0.083333333 0.5 0.666666667 8 3 0 9 2R:23598749-23598775 7 9 1343 FBgn0015903 402.1966667 17.62666667 27.31666667 0.022377112 0.510590015 0.329469189 2 1 1.5 0.15 dme-miR-1003-3p 7mer-m8 ATGTGAG 2R 23679150 23679156 + 2R_23679150_23679156_+ 0.54705915 0.671522449 0.609290799 0.088008843 Pde8 FBtr0344184|FBtr0344179|FBtr0344182|FBtr0344178|FBtr0344183|FBtr0344177|FBtr0344176 23678688|23678688|23678688|23678688|23678688|23678688|23678688 23680017|23680017|23680844|23680844|23680844|23680017|23680017 2R + 23679125 23679177 3'utr Pde8 FlyBase G18601.1 ATTTCTATATATAACTATATAAACCATGTGAGTCTGTGTGTGCGTGAGTGTGT 13 23679160 0.988846229 6 10 102 0.833333333 1.176091259 0.611111111 0.307692308 0.5 13 3 0 15 2R:23679125-23679177 7 Pde8 FBtr0344182|FBtr0344178|FBtr0344183|FBtr0344176|FBtr0344177|FBtr0344184|FBtr0344179 23678688|23678688|23678688|23678688|23678688|23678688|23678688 23680844|23680844|23680844|23680017|23680017|23680017|23680017 ATGTGAG 7mer-m8 dme-miR-1003-3p 2R + 23679137 23679169 3'utr Pde8 FlyBase G14146.1 AACTATATAAACCATGTGAGTCTGTGTGTGCGT 9 23679153 0.742106882 4 8 62 0.941176471 1.204119983 0.705882353 0.555555556 0.764705882 9 1 0 16 2R:23679137-23679169 7 10.5 1344 FBgn0266377 2144.47 62.20666667 95.11333333 0.004896315 0.168792198 0.110394617 -10 -3 -6.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG 2R 23679333 23679339 + 2R_23679333_23679339_+ 0.697748465 0.699933657 0.698841061 0.00154517 Pde8 FBtr0344184|FBtr0344179|FBtr0344182|FBtr0344178|FBtr0344183|FBtr0344177|FBtr0344176 23678688|23678688|23678688|23678688|23678688|23678688|23678688 23680017|23680017|23680844|23680844|23680844|23680017|23680017 2R + 23679294 23679355 3'utr Pde8 FlyBase G18602.1 CACAGCATATTGACCAGATCATATGGCGTGCGCTCCACTGTACCTGGCAACGGTATAATGTA 163 23679332 0.968632819 5 158 876 0.97311828 2.257678575 0.123655914 0.128834356 0.23655914 163 5 0 181 2R:23679294-23679355 7 Pde8 FBtr0344182|FBtr0344178|FBtr0344183|FBtr0344176|FBtr0344177|FBtr0344184|FBtr0344179 23678688|23678688|23678688|23678688|23678688|23678688|23678688 23680844|23680844|23680844|23680017|23680017|23680017|23680017 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" 2R + 23679305 23679350 3'utr Pde8 FlyBase G14147.1 GACCAGATCATATGGCGTGCGCTCCACTGTACCTGGCAACGGTATA 102 23679332 0.806597499 4 99 550 0.967320261 2.170261715 0.124183007 0.401960784 0.60130719 102 5 0 148 2R:23679305-23679350 7 131 1345 FBgn0266377 2144.47 62.20666667 95.11333333 0.061087355 2.105883614 1.377304269 1 1 1 0.15 dme-miR-12-5p 6mer2-7 ATACTC 2R 23699399 23699404 - 2R_23699399_23699404_- 0.662969381 0.999300311 0.831134846 0.23782186 CG4091 FBtr0072097|FBtr0072096|FBtr0072098 23698947|23698947|23698947 23699964|23699964|23699964 2R - 23699375 23699423 3'utr CG4091 FlyBase G26028.1 ATTCGTGGTCTACTTTTTGATACTCCCAAACTCGCTGTGTGCACCCGCA 19 23699406 0.815683846 6 17 115 0.916666667 1.342422681 0.166666667 0.210526316 0.375 19 2 0 22 2R:23699375-23699423 6 CG4091 FBtr0072096|FBtr0072098|FBtr0072097 23698947|23698947|23698947 23699964|23699964|23699964 ATACTC 6mer2-7 dme-miR-12-5p 2R - 23699368 23699422 3'utr CG4091 FlyBase G19695.1 TTCGTGGTCTACTTTTTGATACTCCCAAACTCGCTGTGTGCACCCGCAAGTAACT 10 23699407 0.987895681 5 10 79 1 1.230448921 0.529411765 0.4 0.647058824 10 0 0 17 2R:23699368-23699422 6 12.5 1346 FBgn0034894 369.3166667 23.85666667 36.49333333 0.033846293 0.523962554 0.342528316 2 3 2.5 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 2R 23699570 23699575 - 2R_23699570_23699575_- 0.995896837 0.977994165 0.986945501 0.01265905 CG4091 FBtr0072097|FBtr0072096|FBtr0072098 23698947|23698947|23698947 23699964|23699964|23699964 2R - 23699517 23699603 3'utr CG4091 FlyBase G26029.1 ATAATTAGGAAGAACCAAATGCATTTCGCCAAAGGAATTCACTAAACGGAAATTGTAAACTCGAGCAAAATGCTTTTATCGGTGTGT 16 23699582 0.718025162 10 13 79 0.777777778 1.146128036 0.055555556 0.125 0.222222222 16 4 0 14 2R:23699517-23699603 6 CG4091 FBtr0072096|FBtr0072098|FBtr0072097 23698947|23698947|23698947 23699964|23699964|23699964 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 23699520 23699597 3'utr CG4091 FlyBase G19696.1 AGGAAGAACCAAATGCATTTCGCCAAAGGAATTCACTAAACGGAAATTGTAAACTCGAGCAAAATGCTTTTATCGGTG 8 23699566 0.999137843 4 7 24 1 1 0.1 0.125 0.3 8 0 0 10 2R:23699520-23699597 6 6.5 1347 FBgn0034894 369.3166667 23.85666667 36.49333333 0.017600072 0.272460528 0.178114724 7 -9 -1 0.15 dme-miR-33-5p 8mer-A1 CAATGCAA 2R 23735298 23735305 - 2R_23735298_23735305_- 0.630335787 0.628601486 0.629468636 0.001226335 egl FBtr0114586|FBtr0343272 23734902|23734902 23735574|23735574 2R - 23735294 23735324 3'utr egl FlyBase G26042.1 AACAATCGACAAATCGTGGCAATGCAATCTT 7 23735309 0.680310251 3 6 36 0.875 0.84509804 0 0.142857143 0.25 7 1 0 7 2R:23735294-23735324 8 egl FBtr0114586|FBtr0343272 23734902|23734902 23735574|23735574 CAATGCAA 8mer-A1 dme-miR-33-5p 2R - 23735289 23735325 3'utr egl FlyBase G19706.1 TAACAATCGACAAATCGTGGCAATGCAATCTTACCGA 8 23735309 0.70124795 5 8 43 1 1.204119983 0 0.75 0.875 8 0 0 16 2R:23735289-23735325 8 7.5 1348 FBgn0000562 583.3166667 16.09333333 24.84 0.01285751 0.466031483 0.301932367 4 4 4 0.15 dme-miR-304-5p 6mer3-8 TGAGAT 2R 23811416 23811421 - 2R_23811416_23811421_- 0.9999975 0.999329051 0.999663276 0.00047263 Nxt1 FBtr0343270 23811319 23811686 2R - 23811371 23811506 3'utr Nxt1 FlyBase G26072.1 ACGCAAATTTCAGCAGACTTTCATCGTTACCGCCGAGAATGATAAATGGAAGGTCGTCTCCGATTGCTACCGAATGCAGGAGGTCTGAGATCCACACACTTGTATTTTAAGCTAAGCTAAAGTTCTTACGTCGTAA 17 23811405 0.973029836 10 17 101 1 1.361727836 0.173913043 0.235294118 0.434782609 17 0 0 23 2R:23811371-23811506 6 Nxt1 FBtr0343270 23811319 23811686 TGAGAT 6mer3-8 dme-miR-304-5p 2R - 23811370 23811435 3'utr Nxt1 FlyBase G19726.1 GAATGCAGGAGGTCTGAGATCCACACACTTGTATTTTAAGCTAAGCTAAAGTTCTTACGTCGTAAC 11 23811405 0.967848707 5 11 61 1 1.255272505 0.611111111 0.272727273 0.555555556 11 0 0 18 2R:23811370-23811435 6 5 1349 FBgn0028411 120.6666667 31.62 48.83333333 0.041436464 0.158127767 0.102389078 -16 -16 -16 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2R 23812252 23812257 - 2R_23812252_23812257_- 0.975075138 0.993131948 0.984103543 0.012768086 CG4797 FBtr0072239|FBtr0072239|FBtr0072239 23812183|23812183|23812183 23812425|23812425|23812425 2R - 23812233 23812281 3'utr CG4797 FlyBase G26074.1 AAATGTTAGGTTACCAATTCAAATTGTGATCGCTATGCTTTAAATTGTG 76 23812258 0.781653802 9 75 656 0.975903614 1.908485019 0.108433735 0.092105263 0.168674699 76 2 0 81 2R:23812233-23812281 6 CG4797 FBtr0072239|FBtr0072239|FBtr0072239 23812183|23812183|23812183 23812425|23812425|23812425 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 23812236 23812281 3'utr CG4797 FlyBase G19729.1 AAATGTTAGGTTACCAATTCAAATTGTGATCGCTATGCTTTAAATT 54 23812258 0.759231431 8 52 467 0.977777778 1.467361417 0.2 0.462962963 0.677777778 54 0 2 88 2R:23812236-23812281 6 65 1350 FBgn0034909 31.51666667 1.766666667 2.636666667 2.062400846 36.79245283 24.65233881 1 1 1 0.15 dme-miR-276a-3p 6mer3-8 AGTTCC 2R 23841612 23841617 - 2R_23841612_23841617_- 0.995069654 0.993802512 0.994436083 0.000896046 shu FBtr0072237 23841459 23841694 2R - 23841528 23841669 3'utr shu FlyBase G26083.1 ATATTTCATATCTTACTCAAAAAAAAAAACATACCAAACATGAAGGTAATTTAGTTCCAAGTTCTAGAAGAGCAGTATCATTAGTTATTTCGATATTAGCAACATGAATATCGTAAGCCCAGACGAATGTTAACGTTTTTTG 171 23841619 0.983912788 14 166 1308 0.974226804 1.975431809 0.128865979 0.116959064 0.221649485 171 4 1 189 2R:23841528-23841669 6 shu FBtr0072237 23841459 23841694 AGTTCC 6mer3-8 dme-miR-276a-3p 2R - 23841592 23841651 3'utr shu FlyBase G19735.1 AAAAAAAAAAACATACCAAACATGAAGGTAATTTAGTTCCAAGTTCTAGAAGAGCAGTAT 102 23841619 0.986593798 7 91 743 0.920529801 2.1430148 0.185430464 0.392156863 0.589403974 102 12 0 139 2R:23841592-23841651 6 113.5 1351 FBgn0003401 190.3333333 13.83333333 21.23 0.596322242 8.204819277 5.346208196 2 2 2 0.15 dme-miR-317-3p 8mer-A1 TGTGTTCA 2R 23846904 23846911 + 2R_23846904_23846911_+ 0.631122859 0.631118524 0.631120692 3.11E-06 CG5554 FBtr0343273|FBtr0072126 23846588|23846588 23847024|23847024 2R + 23846848 23846924 3'utr CG5554 FlyBase G18643.1 AACTAAATGTAACTTTAGTCGTATATTTTTACCTTTTGCCAAGCATTTTTGTATTTTGTGTTCAACTTGGTTTCCAC 46 23846903 0.993718318 9 45 576 0.966666667 1.763427994 0.15 0.239130435 0.416666667 46 2 0 58 2R:23846848-23846924 8 CG5554 FBtr0343273|FBtr0072126 23846588|23846588 23847024|23847024 TGTGTTCA 8mer-A1 dme-miR-317-3p 2R + 23846864 23846925 3'utr CG5554 FlyBase G14184.1 AGTCGTATATTTTTACCTTTTGCCAAGCATTTTTGTATTTTGTGTTCAACTTGGTTTCCACA 31 23846903 0.711980043 6 30 344 0.973684211 1.568201724 0.236842105 0.193548387 0.342105263 31 1 0 37 2R:23846864-23846925 8 33 1352 FBgn0034914 870.3333333 68.06 104.0466667 0.037916507 0.484866294 0.317165375 1 1 1 0.15 dme-miR-965-3p 7mer-m8 TACGCTT 2R 23848341 23848347 - 2R_23848341_23848347_- 0.620203345 0.619522256 0.619862801 0.00048154 ytr FBtr0343278|FBtr0072234 23847159|23847159 23848456|23848456 2R - 23848292 23848393 3'utr ytr FlyBase G26096.1 CGCCATCGCAGCAGCCACATCCTTTTCCGTTGCCCAACTAGTTTGCTACGCTTTTTTACTTGTCCGTGCCCAATGGGCAATGGGCGGCGGACGAAGACCTGC 53 23848340 0.984032123 9 51 402 0.939393939 1.190331698 0.060606061 0.20754717 0.363636364 53 1 3 62 2R:23848292-23848393 7 ytr FBtr0343278|FBtr0072234 23847159|23847159 23848456|23848456 TACGCTT 7mer-m8 dme-miR-965-3p 2R - 23848336 23848386 3'utr ytr FlyBase G19741.2 GCAGCAGCCACATCCTTTTCCGTTGCCCAACTAGTTTGCTACGCTTTTTTA 18 23848339 0.933267857 9 17 168 0.96 1.079181246 0.04 0.222222222 0.44 18 0 1 24 2R:23848336-23848386 7 19.5 1353 FBgn0021895 420.7166667 24.65 37.71666667 0.046349483 0.791075051 0.517012815 -7 -8 -7.5 0.15 dme-miR-79-3p 6mer3-8 TAGCTT 2R 23859488 23859493 - 2R_23859488_23859493_- 0.996097773 0.952024002 0.974060888 0.031164883 TBPH FBtr0089626 23859328 23859744 2R - 23859463 23859555 stop_codon TBPH FlyBase G26105.1 CTTTCTTTAAGGCGGTGCCTGTCACCCAATGATGTGGTTAATGTGGTTAACCAACACCTCTGTAGCTTACTTAAATTTACATATATGTATTCC 33 23859495 0.982081056 11 32 242 0.976190476 1.612783857 0.071428571 0.151515152 0.333333333 33 1 0 41 2R:23859463-23859555 6 TBPH FBtr0089626 23859328 23859744 TAGCTT 6mer3-8 dme-miR-79-3p 2R - 23859484 23859546 stop_codon TBPH FlyBase G19747.1 AGGCGGTGCCTGTCACCCAATGATGTGGTTAATGTGGTTAACCAACACCTCTGTAGCTTACTT 13 23859495 0.888250542 6 11 87 0.9 1.255272505 0.15 0.384615385 0.6 13 2 0 18 2R:23859484-23859546 6 11 1354 FBgn0025790 517.66 26.73666667 41.05666667 0.021249469 0.411420022 0.267922384 2 2 2 0.15 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 2R 23866617 23866623 + 2R_23866617_23866623_+ 0.620203997 0.620203487 0.620203742 3.54E-07 CG5569 FBtr0072128 23866579 23866654 2R + 23866593 23866641 3'utr CG5569 FlyBase G18658.1 ACATCTAATGATTGTTTGAAAGGCTGGTGCTCTGTTAGAAATTAAACTG 27 23866618 0.753833411 8 26 220 0.965517241 1.146128036 0.172413793 0.074074074 0.137931034 27 0 1 28 2R:23866593-23866641 7 CG5569 FBtr0072128 23866579 23866654 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 2R + 23866598 23866641 3'utr CG5569 FlyBase G14196.1 TAATGATTGTTTGAAAGGCTGGTGCTCTGTTAGAAATTAAACTG 19 23866620 0.681212384 6 17 144 0.931034483 1.130333768 0.137931034 0.421052632 0.620689655 19 1 1 27 2R:23866598-23866641 7 23 1355 FBgn0034919 94.64666667 15.64666667 23.91333333 0.243009086 1.469961653 0.961806524 -1 -3 -2 0.15 dme-miR-1006-3p 6mer2-7 GAATTT 2R 23876883 23876888 + 2R_23876883_23876888_+ 0.848823576 0.999869168 0.924346372 0.106805368 ken FBtr0072129 23876776 23877442 2R + 23876657 23876928 stop_codon ken FlyBase G18667.1 TACGGAGAACCGGTACAGCTGCTGCTTCTGCTCCATGTGCTTCGAGTCGGTACAGGAGCTCGTCCGTCACCTGTCCGGCCACCACAATAACCTGCTGCTGACAAAGAATCTGCGCGAATAGTGTCCCGGGCATCGGCAACCGCATAATCCGAGAGTATCCCATCTGTCCGATCCGATCCAAGTCGATCCGAGGTGATTCGCCGGACGGACAATTGCAAAGAGACCTGAATTTTAAATAGTAGCAGTAGCAGATTTAATTGCCTATTGTATAA 284 23876886 0.891365903 38 264 1475 0.92816092 1.554960013 0.16954023 0.183098592 0.333333333 284 17 8 323 2R:23876657-23876928 6 ken FBtr0072129 23876776 23877442 GAATTT 6mer2-7 dme-miR-1006-3p 2R + 23876658 23876907 stop_codon ken FlyBase G14206.1 ACGGAGAACCGGTACAGCTGCTGCTTCTGCTCCATGTGCTTCGAGTCGGTACAGGAGCTCGTCCGTCACCTGTCCGGCCACCACAATAACCTGCTGCTGACAAAGAATCTGCGCGAATAGTGTCCCGGGCATCGGCAACCGCATAATCCGAGAGTATCCCATCTGTCCGATCCGATCCAAGTCGATCCGAGGTGATTCGCCGGACGGACAATTGCAAAGAGACCTGAATTTTAAATAGTAGCAGTAGCAG 246 23876886 0.96674328 34 225 1214 0.926229508 1.831229694 0.144808743 0.345528455 0.56010929 246 23 4 339 2R:23876658-23876907 6 145 1356 FBgn0011236 845.1733333 33.37333333 51.22333333 0.171562441 4.344786256 2.830741199 -3 -3 -3 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2R 23877307 23877312 + 2R_23877307_23877312_+ 0.999441927 0.999474024 0.999457975 2.27E-05 ken FBtr0072129 23876776 23877442 2R + 23877234 23877339 3'utr ken FlyBase G18671.1 TGTCTATACGAGAGGTATTTTAATTGCTATTGTATTTCCAACTCGTCTAGCATGAACTTCATGGCCCAAACTTGTACCTATATCTACATTTTTGATAGTTTTGATA 222 23877306 0.980806451 16 213 1585 0.969465649 2.103803721 0.022900763 0.153153153 0.282442748 222 7 1 254 2R:23877234-23877339 6 ken FBtr0072129 23876776 23877442 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2R + 23877257 23877337 3'utr ken FlyBase G14210.1 TTGCTATTGTATTTCCAACTCGTCTAGCATGAACTTCATGGCCCAAACTTGTACCTATATCTACATTTTTGATAGTTTTGA 138 23877306 0.787548952 10 134 931 1 2.334453751 0.046296296 0.427536232 0.634259259 138 0 0 216 2R:23877257-23877337 6 161.5 1357 FBgn0011236 845.1733333 33.37333333 51.22333333 0.191085063 4.839192968 3.152860025 1 1 1 0.15 dme-miR-34-5p 7mer-A1 ACTGCCA 2R 23896809 23896815 + 2R_23896809_23896815_+ 0.787553302 0.815989521 0.801771412 0.02010743 CG17658 FBtr0072133 23896698 23896997 2R + 23896789 23896827 3'utr CG17658 FlyBase G18680.1 ATATTCTAAGTTACCTGATTACTGCCACAAGTATCAAGT 7 23896807 0.972159745 2 7 47 1 1.176091259 0.333333333 0.571428571 0.8 7 0 0 15 2R:23896789-23896827 7 CG17658 FBtr0072133 23896698 23896997 ACTGCCA 7mer-A1 dme-miR-34-5p 2R + 23896789 23896861 3'utr CG17658 FlyBase G14216.1 ATATTCTAAGTTACCTGATTACTGCCACAAGTATCAAGTTAGATGCATTAAAACTACCCAAGACTGTAGAATA 10 23896807 0.857858643 4 10 58 1 1.255272505 0.111111111 0.5 0.722222222 10 0 0 18 2R:23896789-23896861 7 6 1358 FBgn0034924 26.68 1.76 2.723333333 0.224887556 3.409090909 2.203182375 2 2 2 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 23896961 23896966 - 2R_23896961_23896966_- 0.997457507 0.999999998 0.998728752 0.001797819 CG5339 FBtr0072220 23896894 23897117 2R - 23896930 23896983 3'utr CG5339 FlyBase G26145.1 TTTATTCTTAAAGAATTACCAAAAATGTAAATGGATAAACAAACATGTTTAAAT 11 23896967 0.985968869 2 9 77 0.846153846 1.041392685 0 0.181818182 0.307692308 11 2 0 11 2R:23896930-23896983 6 CG5339 FBtr0072220 23896894 23897117 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 23896940 23896974 3'utr CG5339 FlyBase G19772.1 AAAGAATTACCAAAAATGTAAATGGATAAACAAAC 5 23896967 0.614491343 3 4 22 1 0.903089987 0 0.4 0.625 5 0 0 8 2R:23896940-23896974 6 7.5 1359 FBgn0034925 184.9866667 18.32333333 27.93333333 0.040543463 0.409314171 0.26849642 1 1 1 0.15 dme-miR-277-3p 7mer-A1 GCATTTA 2R 23897022 23897028 - 2R_23897022_23897028_- 0.77410665 0.803213561 0.788660105 0.020581757 CG5339 FBtr0072220 23896894 23897117 2R - 23896994 23897098 3'utr CG5339 FlyBase G26146.1 AAAAAGAACCCTTCTGAAGTTATTGTAACCGTTTTCCTCGTAGAGTTAAGTGGCTGCATTGAGAAACTGAGCATTTATACTTATTACAAATGTAGGCTATCAACT 30 23897031 0.957571383 15 29 229 0.96969697 1.505149978 0.242424242 0.1 0.181818182 30 1 0 32 2R:23896994-23897098 7 CG5339 FBtr0072220 23896894 23897117 GCATTTA 7mer-A1 dme-miR-277-3p 2R - 23896996 23897098 3'utr CG5339 FlyBase G19773.1 AAAAAGAACCCTTCTGAAGTTATTGTAACCGTTTTCCTCGTAGAGTTAAGTGGCTGCATTGAGAAACTGAGCATTTATACTTATTACAAATGTAGGCTATCAA 14 23897031 0.978847474 9 14 97 1 1.301029996 0.1 0.285714286 0.5 14 0 0 20 2R:23896996-23897098 7 10.5 1360 FBgn0034925 184.9866667 18.32333333 27.93333333 0.056760848 0.57303984 0.375894988 3 3 3 0.15 dme-miR-932-5p 7mer-A1 GAATTGA 2R 23928036 23928042 - 2R_23928036_23928042_- 0.774839716 0.789270828 0.782055272 0.010204329 Ca-P60A FBtr0072216 23927480 23929230 2R - 23928027 23928109 3'utr Ca-P60A FlyBase G26161.1 TCTATAGAATACCTACTTAAATTAACATTATACATAATTTACTCTGTTATACAATTAGAGACGCTGTGAATTGATTAAACAAA 38 23928055 0.792681964 11 33 252 0.862745098 1.166331422 0.078431373 0.210526316 0.411764706 38 5 2 44 2R:23928027-23928109 7 Ca-P60A FBtr0072216 23927480 23929230 GAATTGA 7mer-A1 dme-miR-932-5p 2R - 23928025 23928087 3'utr Ca-P60A FlyBase G19785.1 TAACATTATACATAATTTACTCTGTTATACAATTAGAGACGCTGTGAATTGATTAAACAAAAA 36 23928039 0.941945151 8 33 224 0.945454545 1.716003344 0.036363636 0.388888889 0.6 36 3 0 52 2R:23928025-23928087 7 31 1361 FBgn0263006 3996.03 108.55 166.07 0.0077577 0.285582681 0.186668272 13 -3 5 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 2R 23928916 23928921 - 2R_23928916_23928921_- 1 0.999999842 0.999999921 1.41E-07 Ca-P60A FBtr0072216 23927480 23929230 2R - 23928902 23928945 3'utr Ca-P60A FlyBase G26166.1 CGTATACCCTACCCTATAGATATCTGTGTTTGTATATTACTATA 17 23928923 0.780194526 7 15 169 0.916666667 1.342422681 0.041666667 0.411764706 0.583333333 17 2 0 22 2R:23928902-23928945 6 Ca-P60A FBtr0072216 23927480 23929230 TGTGTT 6mer3-8 dme-miR-317-3p 2R - 23928906 23928945 3'utr Ca-P60A FlyBase G19788.2 CGTATACCCTACCCTATAGATATCTGTGTTTGTATATTAC 12 23928915 0.680136648 5 9 110 0.833333333 1.176091259 0 0.333333333 0.555555556 12 3 0 15 2R:23928906-23928945 6 12.5 1362 FBgn0263006 3996.03 108.55 166.07 0.003128105 0.115154307 0.075269465 2 -6 -2 0.15 dme-bantam-3p 6mer3-8 TGATCT 2R 23937288 23937293 - 2R_23937288_23937293_- 1 0.93373592 0.96686796 0.046855794 CG3735 FBtr0343280 23937075 23937467 2R - 23937276 23937317 3'utr CG3735 FlyBase G26189.1 TTTAGGAGGAACTGGCTAGGTGATTGATCTGATGTTAAGGGT 8 23937297 0.865217589 5 8 59 1 0.903089987 0.125 0 0 8 0 0 8 2R:23937276-23937317 6 CG3735 FBtr0343280 23937075 23937467 TGATCT 6mer3-8 dme-bantam-3p 2R - 23937275 23937319 3'utr CG3735 FlyBase G19804.1 ATTTTAGGAGGAACTGGCTAGGTGATTGATCTGATGTTAAGGGTG 17 23937294 0.726474016 5 16 121 1 1.414973348 0.230769231 0.294117647 0.538461538 17 0 0 26 2R:23937275-23937319 6 12 1363 FBgn0034933 271.7233333 14.71 22.62666667 0.044162567 0.815771584 0.530347672 4 1 2.5 0.15 dme-miR-980-5p 6mer3-8 GAAAAA 2R 23942064 23942069 + 2R_23942064_23942069_+ 0.578395115 0.709098097 0.643746606 0.092420978 Tal FBtr0072141 23942013 23942114 2R + 23942063 23942091 3'utr Tal FlyBase G18711.1 TGAAAAAGACAATGATTTTATACTTTAAT 6 23942076 0.975254404 4 6 37 1 0.77815125 0 0 0 6 0 0 6 2R:23942063-23942091 6 Tal FBtr0072141 23942013 23942114 GAAAAA 6mer3-8 dme-miR-980-5p 2R + 23942033 23942093 3'utr Tal FlyBase G14240.1 TAGCAGGTGGAGGATGAATACATTCGTTTTTGAAAAAGACAATGATTTTATACTTTAATAA 5 23942075 0.989014265 3 5 43 1 0.903089987 0 0.2 0.5 5 0 0 8 2R:23942033-23942093 6 4 1364 FBgn0023477 409 45.06666667 68.61 0.009779951 0.088757396 0.058300539 -12 -11 -11.5 0.15 dme-miR-33-5p 7mer-A1 AATGCAA 2R 23946765 23946771 + 2R_23946765_23946771_+ 0.782304393 0.697992122 0.740148257 0.059617799 Galphas FBtr0072142|FBtr0343279|FBtr0072143|FBtr0072144|FBtr0301411 23946746|23946746|23946746|23946746|23946746 23946936|23946936|23946936|23946936|23946936 2R + 23946691 23946809 stop_codon Galphas FlyBase G18722.1 AATGATTGCAGAGACATTATTCAAAGGATGCACCTTCGTCAATATGAATTGTTATAGGTTATCCCCATCGCCGTAATGCAAGTAAATAAAAATATTAATGACTTACTGTTTTAAATATA 21 23946785 0.985666685 13 18 151 0.909090909 1.301029996 0.181818182 0.047619048 0.090909091 21 2 0 20 2R:23946691-23946809 7 Galphas FBtr0072144|FBtr0072143|FBtr0343279|FBtr0072142|FBtr0301411 23946746|23946746|23946746|23946746|23946746 23946936|23946936|23946936|23946936|23946936 AATGCAA 7mer-A1 dme-miR-33-5p 2R + 23946696 23946808 stop_codon Galphas FlyBase G14246.1 TTGCAGAGACATTATTCAAAGGATGCACCTTCGTCAATATGAATTGTTATAGGTTATCCCCATCGCCGTAATGCAAGTAAATAAAAATATTAATGACTTACTGTTTTAAATAT 13 23946764 0.973314139 7 13 84 1 1.301029996 0.1 0.384615385 0.6 13 0 0 20 2R:23946696-23946808 7 4 1365 FBgn0001123 1422.84 105.62 161.5433333 0.002811279 0.037871615 0.024761158 -20 1 -9.5 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 23946865 23946872 + 2R_23946865_23946872_+ 0.625114559 0.624171832 0.624643195 0.00066666 Galphas FBtr0072142|FBtr0343279|FBtr0072143|FBtr0072144|FBtr0301411 23946746|23946746|23946746|23946746|23946746 23946936|23946936|23946936|23946936|23946936 2R + 23946851 23946892 3'utr Galphas FlyBase G18723.1 AACAAAAAATTCGCTGCATTTAGATCTGGTATGACCTTTCAC 7 23946863 0.856928223 6 6 45 0.933333333 1.146128036 0.133333333 0.571428571 0.8 7 1 0 14 2R:23946851-23946892 8 Galphas FBtr0072144|FBtr0072143|FBtr0343279|FBtr0072142|FBtr0301411 23946746|23946746|23946746|23946746|23946746 23946936|23946936|23946936|23946936|23946936 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 23946854 23946881 3'utr Galphas FlyBase G14247.1 AAAAAATTCGCTGCATTTAGATCTGGTA 5 23946860 0.837023196 3 4 34 0.666666667 0.77815125 0 0.4 0.666666667 5 3 0 6 2R:23946854-23946881 8 5.5 1366 FBgn0001123 1422.84 105.62 161.5433333 0.003865508 0.052073471 0.034046592 2 5 3.5 0.15 dme-miR-14-3p 6mer2-7 AGACTG 2R 23985196 23985201 - 2R_23985196_23985201_- 0.96021424 0.96315073 0.961682485 0.002076419 Phm FBtr0072203 23985173 23985526 2R - 23985134 23985221 3'utr Phm FlyBase G26210.3 ATTCCACTACGCAGTAAATGAGACTGCTCCGACGTAAATATTTTCAATGCAAAGCATTTATTCTCGCGTTTTTTGTATGTATATAGAA 90 23985203 0.960679406 9 88 382 0.979591837 1.982271233 0.163265306 0.077777778 0.153061224 90 2 0 96 2R:23985134-23985221 6 Phm FBtr0072203 23985173 23985526 AGACTG 6mer2-7 dme-miR-14-3p 2R - 23985149 23985220 3'utr Phm FlyBase G19823.1 TTCCACTACGCAGTAAATGAGACTGCTCCGACGTAAATATTTTCAATGCAAAGCATTTATTCTCGCGTTTTT 50 23985203 0.941227515 8 49 198 0.986842105 1.574031268 0.171052632 0.42 0.618421053 50 0 1 75 2R:23985149-23985220 6 65 1367 FBgn0019948 999.0666667 82.65666667 126.22 0.065060723 0.78638545 0.514973855 2 2 2 0.15 dme-miR-999-3p 6mer3-8 AGTTAA 2R 24020022 24020027 - 2R_24020022_24020027_- 0.954438388 0.937352122 0.945895255 0.012081839 CG3907 FBtr0072195|FBtr0072196 24019896|24019896 24020237|24020237 2R - 24019974 24020109 3'utr CG3907 FlyBase G26229.1 GAAAACTGCAATGTACATATGGTTCGAAGAGCTATTTAACTTAATGACAATTTATAGGATGACGATGTGCACGTGTGATTTCAGTTAAGCAGTTAAGTTTAGAAAGAGTAAATGTACATATGGGGGGGGCGAAGTA 426 24020030 0.979985828 21 408 3226 0.958 1.777245526 0.354 0.143192488 0.27 426 14 7 479 2R:24019974-24020109 6 CG3907 FBtr0072195|FBtr0072196 24019896|24019896 24020237|24020237 AGTTAA 6mer3-8 dme-miR-999-3p 2R - 24019923 24020128 3'utr CG3907 FlyBase G19835.1 AATTACATTTATTGCACACGAAAACTGCAATGTACATATGGTTCGAAGAGCTATTTAACTTAATGACAATTTATAGGATGACGATGTGCACGTGTGATTTCAGTTAAGCAGTTAAGTTTAGAAAGAGTAAATGTACATATGGGGGGGGCGAAGTAAGTGTAAGTCCAACATTATTCACTTTAGATACACGATATGTATTTTATTTG 350 24020030 0.982182462 23 344 2560 0.987084871 2.126293791 0.348708487 0.394285714 0.608856089 350 4 3 535 2R:24019923-24020128 6 267 1368 FBgn0034958 1493.146667 107.1866667 164.3533333 0.178816995 2.490981465 1.624548736 3 3 3 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 24020208 24020213 - 2R_24020208_24020213_- 0.999999356 0.999998549 0.999998953 6.36E-07 CG3907 FBtr0072195|FBtr0072196 24019896|24019896 24020237|24020237 2R - 24020149 24020323 lincRNA_intron-lincRNA_exon CG3907 FlyBase G26230.1 AGCCCGAAGCGATTGCCGTCAAGCAGGAAGTCATAAAGCCGTCTGCAAATGCTACAGTGAAGCTTCAGGAATCCTTGAAGCTGTAAGCTGCTGCATTGCTGCGTTGTATTACCAAATTTGTTCGATTCCGTATTTAGCCATTAAGACCTCATGGATTCCATGTGTCCGAGTTACA 83 24020198 0.881809046 27 78 648 0.951923077 1.995635195 0.201923077 0.192771084 0.355769231 83 5 0 99 2R:24020149-24020323 6 CG3907 FBtr0072195|FBtr0072196 24019896|24019896 24020237|24020237 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 24020142 24020252 stop_codon CG3907 FlyBase G19836.1 TCCTTGAAGCTGTAAGCTGCTGCATTGCTGCGTTGTATTACCAAATTTGTTCGATTCCGTATTTAGCCATTAAGACCTCATGGATTCCATGTGTCCGAGTTACAGCCAACG 48 24020206 0.931047451 19 45 409 0.972222222 1.84509804 0.277777778 0.291666667 0.527777778 48 2 0 70 2R:24020142-24020252 6 27.5 1369 FBgn0034958 1493.146667 107.1866667 164.3533333 0.018417481 0.256561761 0.167322435 -15 -7 -11 0.15 dme-miR-34-5p 6mer2-7 ACTGCC 2R 24031590 24031595 - 2R_24031590_24031595_- 0.70708706 0.696408724 0.701747892 0.007550769 Chi FBtr0072192|FBtr0072191 24031536|24031536 24031803|24031803 2R - 24031578 24031625 3'utr Chi FlyBase G26246.1 AAACCGTAGGATACTTCTGTTCTTGTCTTGACTGCCTTGCAAAGTACT 29 24031599 0.650413198 8 26 273 0.921052632 1.544068044 0.078947368 0.24137931 0.421052632 29 3 0 35 2R:24031578-24031625 6 Chi FBtr0072192|FBtr0072191 24031536|24031536 24031803|24031803 ACTGCC 6mer2-7 dme-miR-34-5p 2R - 24031560 24031613 3'utr Chi FlyBase G19846.1 ACTTCTGTTCTTGTCTTGACTGCCTTGCAAAGTACTTAATGTGTTGTTTTAGTA 25 24031600 0.970228801 9 23 252 0.897435897 1.544068044 0.179487179 0.44 0.641025641 25 4 0 35 2R:24031560-24031613 6 25.5 1370 FBgn0013764 624.9866667 35.29333333 53.78666667 0.04080087 0.722516056 0.474095191 4 5 4.5 0.15 dme-miR-305-5p 7mer-m1 GTACAAT 2R 24044373 24044379 + 2R_24044373_24044379_+ 0.765525975 0.765586663 0.765556319 4.29E-05 IntS1 FBtr0072168 24044337 24044458 2R + 24044344 24044384 3'utr IntS1 FlyBase G18814.2 CGGTCTATAAGTTAGAACCGTCATCATATGTACAATGTAAT 10 24044369 0.597909211 5 9 57 1 1.113943352 0.153846154 0.3 0.461538462 10 0 0 13 2R:24044344-24044384 7 IntS1 FBtr0072168 24044337 24044458 GTACAAT 7mer-m1 dme-miR-305-5p 2R + 24044353 24044384 3'utr IntS1 FlyBase G14309.1 AGTTAGAACCGTCATCATATGTACAATGTAAT 8 24044368 0.640308137 3 8 54 1 1.041392685 0.090909091 0.25 0.454545455 8 0 0 11 2R:24044353-24044384 7 8 1371 FBgn0034964 864.9966667 16.29666667 25.03666667 0.009248591 0.490897934 0.319531354 4 5 4.5 0.15 dme-miR-282-5p 7mer-A1 GAGGCTA 2R 24052999 24053005 + 2R_24052999_24053005_+ 0.821805093 0.821819463 0.821812278 1.02E-05 sei FBtr0343342|FBtr0072169|FBtr0072170 24052939|24052939|24052939 24053035|24053035|24053035 2R + 24052982 24053014 3'utr sei FlyBase G18820.1 TGTGCACAAGCTGTTGCGAGGCTAAAGAGCGAA 21 24052996 0.707925865 2 21 71 1 1.361727836 0.304347826 0.047619048 0.130434783 21 0 0 23 2R:24052982-24053014 7 sei FBtr0072170|FBtr0343342|FBtr0072169 24052939|24052939|24052939 24053035|24053035|24053035 GAGGCTA 7mer-A1 dme-miR-282-5p 2R + 24052982 24053015 3'utr sei FlyBase G14312.1 TGTGCACAAGCTGTTGCGAGGCTAAAGAGCGAAA 17 24052996 0.721416372 2 17 62 1 1.380211242 0.666666667 0.411764706 0.583333333 17 0 0 24 2R:24052982-24053015 7 19 1372 FBgn0003353 165.25 6.316666667 9.546666667 0.114977307 3.007915567 1.990223464 3 3 3 0.15 dme-bantam-3p 8mer-A1 TGATCTCA 2R 24089378 24089385 + 2R_24089378_24089385_+ 0.63113418 0.631105068 0.631119624 2.06E-05 snama FBtr0307174 24089270 24089512 2R + 24089309 24089420 3'utr snama FlyBase G18849.1 GATCGAGTCAAGTGTCGAGGCCACTGGAACTCCGAGGTGTTGACGAGTCCATACGCAGCCGGTCCTGCCTGATCTCAATATTTTTAAGTTCCAACAGAGACTATACACACAC 48 24089376 0.982996232 13 45 341 0.927272727 1.40654018 0.054545455 0.145833333 0.254545455 48 3 1 51 2R:24089309-24089420 8 snama FBtr0307174 24089270 24089512 TGATCTCA 8mer-A1 dme-bantam-3p 2R + 24089337 24089420 3'utr snama FlyBase G14345.1 ACTCCGAGGTGTTGACGAGTCCATACGCAGCCGGTCCTGCCTGATCTCAATATTTTTAAGTTCCAACAGAGACTATACACACAC 27 24089377 0.987153797 7 23 201 0.844444444 1.579783597 0 0.481481481 0.688888889 27 7 0 38 2R:24089337-24089420 8 27.5 1373 FBgn0086129 1271.946667 47.64 73.46 0.021620403 0.577246012 0.37435339 2 1 1.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 24127704 24127710 - 2R_24127704_24127710_- 0.661615511 0.58075666 0.621186086 0.057175806 tamo FBtr0072282|FBtr0072281|FBtr0343438 24126636|24126636|24127142 24127812|24127812|24127812 2R - 24127677 24127745 3'utr tamo FlyBase G26309.1 ACGACCAATGTAAGCCTGTGCGCGTGTCTCTAAGATCTAGTCTCGATCGAAGTCGTCGTTCGATGGCAG 22 24127710 0.674359391 9 19 141 0.870967742 1.431363764 0.290322581 0.363636364 0.548387097 22 4 0 27 2R:24127677-24127745 7 tamo FBtr0072282|FBtr0072281|FBtr0343438 24126636|24126636|24127142 24127812|24127812|24127812 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R - 24127655 24127745 3'utr tamo FlyBase G19899.1 ACGACCAATGTAAGCCTGTGCGCGTGTCTCTAAGATCTAGTCTCGATCGAAGTCGTCGTTCGATGGCAGGCAGCCCTTTGTCATCCGCATT 14 24127710 0.877752855 8 12 103 0.888888889 0.903089987 0.333333333 0.142857143 0.333333333 14 1 1 16 2R:24127655-24127745 7 8.5 1374 FBgn0041582 428.8966667 12.44 19.01333333 0.019818293 0.683279743 0.447054698 0 0 0 0.15 dme-miR-1008-3p 6mer3-8 AGCTGT 2R 24177180 24177185 + 2R_24177180_24177185_+ 0.994790687 0.998955903 0.996873295 0.002945241 Nop60B FBtr0300861|FBtr0100213|FBtr0300227 24177104|24177104|24177104 24186343|24186343|24186343 2R + 24177104 24177279 stop_codon Nop60B FlyBase G18885.1 AGGAATCAGAAGTTTCTATAGGATTAGGTTTTAAAGAGAATTCTACGCTTTTTTGTAGAGGCACCTACCGATTGCTAGCTGTTAGGTTTAAGGAGTGTTTTTATGTGTAGAAGTGCATACAAATTACAAATGCATTTAAGTGACATTCGCAATGCAATAAATTGAACATTTTATTG 380 24177176 0.832317126 39 351 3036 0.917410714 1.437750563 0.303571429 0.157894737 0.285714286 380 23 14 411 2R:24177104-24177279 6 Nop60B FBtr0300227|FBtr0300861|FBtr0100213 24177104|24177104|24177104 24186343|24186343|24186343 AGCTGT 6mer3-8 dme-miR-1008-3p 2R + 24177090 24177270 stop_codon Nop60B FlyBase G14369.1 CGAAGCTCAGGAATAGGAATCAGAAGTTTCTATAGGATTAGGTTTTAAAGAGAATTCTACGCTTTTTTGTAGAGGCACCTACCGATTGCTAGCTGTTAGGTTTAAGGAGTGTTTTTATGTGTAGAAGTGCATACAAATTACAAATGCATTTAAGTGACATTCGCAATGCAATAAATTGAAC 207 24177176 0.987847291 32 182 1632 0.898360656 1.358569317 0.275409836 0.347826087 0.557377049 207 20 11 274 2R:24177090-24177270 6 146.5 1375 FBgn0259937 3319.8 215.61 334.3133333 0.044129164 0.679467557 0.438211658 4 4 4 0.15 dme-miR-33-5p 8mer-A1 CAATGCAA 2R 24264882 24264889 + 2R_24264882_24264889_+ 0.630125832 0.628688722 0.629407277 0.001016183 CG3376 FBtr0072265 24264348 24265213 2R + 24264853 24265208 3'utr CG3376 FlyBase G18961.4 TGGTCGTTTGAGGTCATCCAACTGCAAGTCAATGCAATCGCAACGAAGGAAAACTCCTACCCCATAAGCTTACTATGTGATAACTAGTGCTTAAAACCATTTCGCTTAGTGTACGTTAACGCAATGATGTCCCAAAACTGCCTGCTTTGAAACCTTACAATCGCCCTTCGGAATCTGAGTCAGTGAAGAATAGTCATTTATCTGTAATCGAGTCGATGCTGTTGCCCACTCCGCAGCATTTGCGGTCGTGGCATGTTGCGCGCTTTTACGCAATGGAAATTGTCGAGCAAATTACCTTCTAAGACACCTAATTGTAAAGCTAACCTAGGTCTTAACTTAAATAAAGTGCAATTATT 255 24264881 0.974749414 47 237 1375 0.920127796 1.857332496 0.309904153 0.192156863 0.341853035 255 22 3 288 2R:24264853-24265208 8 CG3376 FBtr0072265|FBtr0343442 24264348|24264838 24265213|24265213 CAATGCAA 8mer-A1 dme-miR-33-5p 2R + 24264851 24264963 3'utr CG3376 FlyBase G14427.2 GATGGTCGTTTGAGGTCATCCAACTGCAAGTCAATGCAATCGCAACGAAGGAAAACTCCTACCCCATAAGCTTACTATGTGATAACTAGTGCTTAAAACCATTTCGCTTAGTG 93 24264881 0.923431083 14 79 385 0.869565217 1.037788561 0.326086957 0.344086022 0.557971014 93 8 10 120 2R:24264851-24264963 8 70.5 1376 FBgn0034997 1791.34 62.30666667 94.61 0.039356013 1.131500107 0.745164359 1 1 1 0.15 dme-miR-1006-3p 8mer-A1 CGAATTTA 2R 24312766 24312773 + 2R_24312766_24312773_+ 0.670548962 0.614844281 0.642696621 0.039389171 betaTub60D FBtr0072270|FBtr0343443 24312146|24312146 24313099|24313099 2R + 24312675 24312853 3'utr betaTub60D FlyBase G18982.1 AACCCCAAGTTATCCCACGTCATTCTTATACTACTATTTATATCGCAACGTCAGCAGAAGGACCACAAGTATCTAGTATTGCAAAGGATATCGAATTTATGCAGAAATCTCAAAACGAGAATGTCCAGCGTCTAGGAAGTCGGCACTCAAGACTTGGCGGCACTTACGTTTAGGGCTAT 110 24312765 0.968301615 22 105 645 0.94488189 2.079181246 0.212598425 0.145454545 0.25984252 110 7 0 120 2R:24312675-24312853 8 betaTub60D FBtr0343443|FBtr0072270 24312146|24312146 24313099|24313099 CGAATTTA 8mer-A1 dme-miR-1006-3p 2R + 24312670 24312786 3'utr betaTub60D FlyBase G14446.1 TTCATAACCCCAAGTTATCCCACGTCATTCTTATACTACTATTTATATCGCAACGTCAGCAGAAGGACCACAAGTATCTAGTATTGCAAAGGATATCGAATTTATGCAGAAATCTCA 54 24312748 0.965927473 16 50 287 0.934065934 1.452297671 0.131868132 0.518518519 0.714285714 54 4 2 85 2R:24312670-24312786 8 27 1377 FBgn0003888 691.4333333 33.13333333 50.45333333 0.039049318 0.814889336 0.535147992 1 18 9.5 0.15 dme-miR-92b-3p 7mer-m1 TGCAATT 2R 24312935 24312941 + 2R_24312935_24312941_+ 0.668347257 0.751354405 0.709850831 0.058694883 betaTub60D FBtr0072270|FBtr0343443 24312146|24312146 24313099|24313099 2R + 24312926 24313070 3'utr betaTub60D FlyBase G18984.1 AAAAGCATCTGCAATTGTATTTACATAATCTTAGGGCACAATCTATTCACTTTGTATTCGTGTGCAGTACTTCTCTTGTAGTTTTATATGGATAAAAACATTTGTACCCAATAAATAACTAATAATAATGGCAAACATTTTTGAC 61 24312940 0.890466309 18 55 552 0.917808219 1.525044807 0.164383562 0.131147541 0.273972603 61 5 1 67 2R:24312926-24313070 7 betaTub60D FBtr0343443|FBtr0072270 24312146|24312146 24313099|24313099 TGCAATT 7mer-m1 dme-miR-92b-3p 2R + 24312927 24313059 3'utr betaTub60D FlyBase G14448.1 AAAGCATCTGCAATTGTATTTACATAATCTTAGGGCACAATCTATTCACTTTGTATTCGTGTGCAGTACTTCTCTTGTAGTTTTATATGGATAAAAACATTTGTACCCAATAAATAACTAATAATAATGGCAA 43 24312941 0.870051223 16 36 364 0.825396825 1.414973348 0.047619048 0.348837209 0.555555556 43 10 1 52 2R:24312927-24313059 7 19 1378 FBgn0003888 691.4333333 33.13333333 50.45333333 0.02747915 0.573440644 0.376585624 -5 -6 -5.5 0.15 dme-miR-1003-3p 6mer2-7 TGTGAG 2R 24392317 24392322 - 2R_24392317_24392322_- 0.97186183 0.967295729 0.96957878 0.00322872 slik FBtr0072366|FBtr0332925|FBtr0072364 24392127|24392127|24392127 24393053|24393053|24393053 2R - 24392173 24392367 3'utr slik FlyBase G26328.1 AACAGAAGAAATATGTGAGATGTTGGGATTCCATGAAACAAATTGTGTGAGCGCTCGAGTTTTGAGCTGCAGACGGACGTAGATATGCAGATCGATAATGAGGGGCCGTCGGGTAACAGTAAACGATATTTATATTTGTACAAGTTTATGCTTATATATTTTATATAAATATATATATATATATTTAAAATAAAC 45 24392325 0.983309584 18 44 281 0.981818182 1.73239376 0.381818182 0.2 0.345454545 45 1 0 54 2R:24392173-24392367 6 slik FBtr0332925|FBtr0072364|FBtr0072366 24392127|24392127|24392127 24393053|24393053|24393053 TGTGAG 6mer2-7 dme-miR-1003-3p 2R - 24392210 24392416 3'utr slik FlyBase G19913.1 AGAGACAGAGACACATCCACGGAAAGTTTAGCAAAAGTTAATGTGTAGCAACAGAAGAAATATGTGAGATGTTGGGATTCCATGAAACAAATTGTGTGAGCGCTCGAGTTTTGAGCTGCAGACGGACGTAGATATGCAGATCGATAATGAGGGGCCGTCGGGTAACAGTAAACGATATTTATATTTGTACAAGTTTATGCTTATATA 33 24392325 0.973928813 16 32 196 0.962264151 1.707570176 0.377358491 0.393939394 0.622641509 33 2 0 51 2R:24392210-24392416 6 13 1379 FBgn0035001 5352.49 110.13 168.49 0.002428776 0.118042314 0.077155914 3 3 3 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2R 24394005 24394010 - 2R_24394005_24394010_- 0.967658919 0.990726806 0.979192862 0.016311469 slik FBtr0290019 24393676 24394246 2R - 24393988 24394036 3'utr slik FlyBase G26335.1 AATTTGTAAAGCTTTTCTCACCTAATTACCTGCAACGGAAAATGCCATA 15 24394011 0.978960368 2 13 92 0.941176471 0.903089987 0.117647059 0.133333333 0.235294118 15 0 1 16 2R:24393988-24394036 6 slik FBtr0290019 24393676 24394246 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2R - 24393900 24394038 3'utr slik FlyBase G19920.1 CGAATTTGTAAAGCTTTTCTCACCTAATTACCTGCAACGGAAAATGCCATACATTCTGTCTTGCCAAAAGTTGATTGTTTGTTGGAAATGCTATTTTAATGAACGAAAGTGGATTACTTGTTTGCCTATTTTTAATGTT 17 24394011 0.984509555 9 17 141 1 1.397940009 0.12 0.470588235 0.64 17 0 0 25 2R:24393900-24394038 6 11 1380 FBgn0035001 5352.49 110.13 168.49 0.002055118 0.099881958 0.065285774 1 1 1 0.15 dme-miR-33-5p 7mer-m8 CAATGCA 2R 24404714 24404720 - 2R_24404714_24404720_- 0.627712641 0.644557106 0.636134874 0.01191086 SerT FBtr0072362|FBtr0343316 24404593|24404593 24405451|24405451 2R - 24404700 24404736 3'utr SerT FlyBase G26370.1 TAGAGAACGCCCTGTACAATGCATTACTCAACCGTTT 26 24404713 0.720391733 5 26 126 1 1.531478917 0.176470588 0.192307692 0.382352941 26 0 0 34 2R:24404700-24404736 7 SerT FBtr0072362|FBtr0343316 24404593|24404593 24405451|24405451 CAATGCA 7mer-m8 dme-miR-33-5p 2R - 24404702 24404739 3'utr SerT FlyBase G19950.1 AGATAGAGAACGCCCTGTACAATGCATTACTCAACCGT 14 24404713 0.702134529 5 14 63 1 1.414973348 0.230769231 0.571428571 0.769230769 14 0 0 26 2R:24404702-24404739 7 19.5 1381 FBgn0010414 3 0.116666667 0.176666667 6.5 167.1428571 110.3773585 -7 -7 -7 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 24405175 24405181 - 2R_24405175_24405181_- 0.50966525 0.65736137 0.58351331 0.104436985 SerT FBtr0072362|FBtr0343316 24404593|24404593 24405451|24405451 2R - 24405132 24405228 3'utr SerT FlyBase G26374.1 ATCATCACCATCAGCATCAGCATCGGATCAGCAGCGATATCATTAGCTCTAGTCTTAGGCAGTCGCACAGCCATAGTTTAAGCCTCTGCTCGGTGCA 76 24405174 0.982051349 10 72 536 0.957894737 1.959041392 0.031578947 0.236842105 0.389473684 76 4 0 91 2R:24405132-24405228 7 SerT FBtr0072362|FBtr0343316 24404593|24404593 24405451|24405451 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R - 24405155 24405228 3'utr SerT FlyBase G19953.1 ATCATCACCATCAGCATCAGCATCGGATCAGCAGCGATATCATTAGCTCTAGTCTTAGGCAGTCGCACAGCCAT 46 24405174 0.980204359 10 46 319 1 1.886490725 0.090909091 0.434782609 0.662337662 46 0 0 77 2R:24405155-24405228 7 55.5 1382 FBgn0010414 3 0.116666667 0.176666667 18.5 475.7142857 314.1509434 -7 -7 -7 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2R 24414144 24414150 + 2R_24414144_24414150_+ 0.671058122 0.670111546 0.670584834 0.000669347 CG45068 FBtr0344430 24414110 24415295 2R + 24414096 24414169 stop_codon CG45068 FlyBase G19003.1 GGAAACCGCGGCGTAGTCTTCACTTCTTGGCCAGTCCAAGTGCCTTATACCAAAGTTCTAGGTTAAGATTAACT 42 24414143 0.988669692 7 41 378 0.976744186 1.62324929 0.023255814 0.023809524 0.046511628 42 1 0 42 2R:24414096-24414169 7 CG45068 FBtr0344430 24414110 24415295 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 24414093 24414165 stop_codon CG45068 FlyBase G14462.1 GACGGAAACCGCGGCGTAGTCTTCACTTCTTGGCCAGTCCAAGTGCCTTATACCAAAGTTCTAGGTTAAGATT 23 24414143 0.985142535 6 23 188 1 1.556302501 0.138888889 0.347826087 0.583333333 23 0 0 36 2R:24414093-24414165 7 30 1383 FBgn0266438 77.02666667 2.906666667 4.47 0.389475506 10.32110092 6.711409396 1 1 1 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2R 24414289 24414295 + 2R_24414289_24414295_+ 0.809226572 0.756047072 0.782636822 0.037603585 CG45068 FBtr0344430 24414110 24415295 2R + 24414258 24414325 3'utr CG45068 FlyBase G19004.1 GTGCACAGCAAACTTGAAATTTTGAATATGGCTAGTCATTACCAAATATTCCCTTGATCTTAAGATTC 42 24414296 0.973008794 9 36 333 0.905660377 1.204119983 0.018867925 0.142857143 0.320754717 42 3 2 48 2R:24414258-24414325 7 CG45068 FBtr0344430 24414110 24415295 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R + 24414223 24414318 3'utr CG45068 FlyBase G14463.1 TTGTTAAGCTTGACTTCTGTAAACATTCCCAATATGTGCACAGCAAACTTGAAATTTTGAATATGGCTAGTCATTACCAAATATTCCCTTGATCTT 34 24414296 0.984861332 13 30 262 0.879310345 1.707570176 0.051724138 0.5 0.706896552 34 7 0 51 2R:24414223-24414318 7 30.5 1384 FBgn0266438 77.02666667 2.906666667 4.47 0.395966765 10.49311927 6.823266219 -7 -7 -7 0.15 dme-miR-8-3p 7mer-A1 AGTATTA 2R 24523359 24523365 - 2R_24523359_24523365_- 0.807876215 0.82135127 0.814613742 0.009528335 CG4612 FBtr0306137 24521872 24524317 2R - 24523341 24523382 3'utr CG4612 FlyBase G26393.1 CCTGCGGACAGTACATGAGTATTAAAATTTTAGCGATTACAA 12 24523367 0.876618982 2 10 76 0.833333333 1 0.25 0 0 12 2 0 10 2R:24523341-24523382 7 CG4612 FBtr0306137 24521872 24524317 AGTATTA 7mer-A1 dme-miR-8-3p 2R - 24523340 24523385 3'utr CG4612 FlyBase G19968.1 TATCCTGCGGACAGTACATGAGTATTAAAATTTTAGCGATTACAAG 7 24523367 0.967021972 3 7 44 1 1 0.3 0.428571429 0.6 7 0 0 10 2R:24523340-24523385 7 9.5 1385 FBgn0035016 1738.693333 59.93333333 91.91666667 0.005463873 0.158509455 0.103354488 2 2 2 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 24557543 24557549 + 2R_24557543_24557549_+ 0.723569011 0.716703761 0.720136386 0.004854429 ITP FBtr0290219|FBtr0290219|FBtr0290219 24556424|24556424|24556424 24558961|24558961|24558961 2R + 24557499 24557593 3'utr ITP FlyBase G19028.1 AAAGGATAATCAATCATTCGCTGGCTATTTGAGAGCATCAAAATTGTGATAAATGAGAATTAGAATGCGAATGCGCGACGCAGGACACCGCCAGA 236 24557542 0.970189644 11 222 1268 0.939285714 1.419955748 0.189285714 0.156779661 0.289285714 236 8 9 263 2R:24557499-24557593 7 ITP FBtr0290219|FBtr0290219|FBtr0290219 24556424|24556424|24556424 24558961|24558961|24558961 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 24557491 24557583 3'utr ITP FlyBase G14478.1 AAATTAATAAAGGATAATCAATCATTCGCTGGCTATTTGAGAGCATCAAAATTGTGATAAATGAGAATTAGAATGCGAATGCGCGACGCAGGA 156 24557542 0.969239642 10 148 831 0.946188341 1.421192468 0.174887892 0.314102564 0.520179372 156 5 7 211 2R:24557491-24557583 7 182 1386 FBgn0035023 1304.81 56.75666667 87.48 0.13948391 3.206671757 2.080475537 1 1 1 0.15 dme-miR-980-3p 6mer2-7 GCAGCT 2R 24557636 24557641 + 2R_24557636_24557641_+ 0.998983636 0.980595718 0.989789677 0.013002209 ITP FBtr0290219 24556424 24558961 2R + 24557597 24557656 3'utr ITP FlyBase G19029.1 AGAGACCGCCATACAGAAGGCGACAGAGACAGACAGACTGCAGCTGGCGATTTGCGCGCG 8 24557647 0.875103766 5 8 19 1 0.954242509 0.333333333 0.125 0.222222222 8 0 0 9 2R:24557597-24557656 6 ITP FBtr0290219 24556424 24558961 GCAGCT 6mer2-7 dme-miR-980-3p 2R + 24557614 24557656 3'utr ITP FlyBase G14479.1 AGGCGACAGAGACAGACAGACTGCAGCTGGCGATTTGCGCGCG 6 24557647 0.918304157 3 5 17 0.9 0.954242509 0.7 0.666666667 0.8 6 1 0 9 2R:24557614-24557656 6 6.5 1387 FBgn0035023 1304.81 56.75666667 87.48 0.004981568 0.114523991 0.074302698 -11 -11 -11 0.15 dme-miR-282-5p 7mer-m8 AGAGGCT 2R 24558069 24558075 + 2R_24558069_24558075_+ 0.626706758 0.631334978 0.629020868 0.003272632 ITP FBtr0290219 24556424 24558961 2R + 24558035 24558100 3'utr ITP FlyBase G19030.1 AATGCTTCGGATCGCCCTTCTTCAACGCCTGCATAGAGGCTCTTCAGCTGCACGAGGAGATGGACA 65 24558068 0.913785312 6 62 363 0.948717949 1.86923172 0.397435897 0.184615385 0.320512821 65 4 0 74 2R:24558035-24558100 7 ITP FBtr0290219 24556424 24558961 AGAGGCT 7mer-m8 dme-miR-282-5p 2R + 24558047 24558091 3'utr ITP FlyBase G14480.1 CGCCCTTCTTCAACGCCTGCATAGAGGCTCTTCAGCTGCACGAGG 25 24558068 0.874456466 3 20 129 0.815789474 1.491361694 0.552631579 0.32 0.552631579 25 7 0 31 2R:24558047-24558091 7 41 1388 FBgn0035023 1304.81 56.75666667 87.48 0.031422199 0.722382099 0.468678555 1 1 1 0.15 dme-miR-79-3p 6mer2-7 AGCTTT 2R 24558473 24558478 + 2R_24558473_24558478_+ 0.934836468 0.960299388 0.947567928 0.018004989 ITP FBtr0300186|FBtr0290219 24558137|24556424 24558961|24558961 2R + 24558448 24558492 3'utr ITP FlyBase G19032.1 CATCTGTCATGAAACAGTCTCGTGGAGCTTTTAGTTGTAGTGAAT 12 24558478 0.988365208 8 12 114 1 1.113943352 0.153846154 0.083333333 0.153846154 12 0 0 13 2R:24558448-24558492 6 ITP FBtr0290219|FBtr0300186 24556424|24558137 24558961|24558961 AGCTTT 6mer2-7 dme-miR-79-3p 2R + 24558458 24558492 3'utr ITP FlyBase G14481.1 GAAACAGTCTCGTGGAGCTTTTAGTTGTAGTGAAT 10 24558479 0.610112055 7 9 95 0.933333333 1.146128036 0.4 0.5 0.666666667 10 1 0 14 2R:24558458-24558492 6 11 1389 FBgn0035023 1304.81 56.75666667 87.48 0.008430346 0.193809831 0.125743027 -5 -6 -5.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 24558909 24558915 + 2R_24558909_24558915_+ 0.661615509 0.661615483 0.661615496 0 ITP FBtr0300186|FBtr0290219 24558137|24556424 24558961|24558961 2R + 24558890 24558934 3'utr ITP FlyBase G19035.1 TAATTTAAACTTGTTTGGATCTAGTCGTAAAATATAAATAAAGAT 51 24558907 0.626572594 12 43 451 0.877192982 1.096910013 0.01754386 0.098039216 0.192982456 51 4 3 50 2R:24558890-24558934 7 ITP FBtr0290219|FBtr0300186 24556424|24558137 24558961|24558961 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 24558886 24558938 3'utr ITP FlyBase G14485.1 TAATTAATTTAAACTTGTTTGGATCTAGTCGTAAAATATAAATAAAGATTGTA 31 24558904 0.644614109 12 25 267 0.840909091 1.267171728 0.113636364 0.35483871 0.545454545 31 6 1 37 2R:24558886-24558938 7 39.5 1390 FBgn0035023 1304.81 56.75666667 87.48 0.030272607 0.695953486 0.451531779 2 5 3.5 0.15 dme-bantam-3p 6mer3-8 TGATCT 2R 24568160 24568165 - 2R_24568160_24568165_- 0.999745967 0.999998261 0.999872114 0.000178403 Fcp1 FBtr0343489|FBtr0072342 24567985|24567985 24568459|24568459 2R - 24568154 24568185 3'utr Fcp1 FlyBase G26412.1 TGAATCAAAAACTCTCATTCTGATCTAATGTA 9 24568166 0.684736527 4 8 63 0.846153846 1.041392685 0 0.222222222 0.461538462 9 2 0 11 2R:24568154-24568185 6 Fcp1 FBtr0343489|FBtr0072342 24567985|24567985 24568459|24568459 TGATCT 6mer3-8 dme-bantam-3p 2R - 24568128 24568177 3'utr Fcp1 FlyBase G19979.1 AAACTCTCATTCTGATCTAATGTAAATTGAAGCCTACTGTAAATGTAAAT 6 24568165 0.990418314 4 5 46 0.8 0.903089987 0 0.333333333 0.6 6 2 0 8 2R:24568128-24568177 6 6.5 1391 FBgn0035026 362.9966667 13.60666667 20.97333333 0.017906501 0.477707006 0.309917355 1 0 0.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2R 24577629 24577634 + 2R_24577629_24577634_+ 0.9999893 0.999523482 0.999756391 0.00032937 Start1 FBtr0089868|FBtr0305054|FBtr0089867|FBtr0343485 24577463|24577463|24577260|24577463 24577676|24577676|24577676|24577676 2R + 24577553 24577648 3'utr Start1 FlyBase G19067.1 AATTTGAAGCAGGAGAGCGAGTTCAGTGCTGTAAGTTTATTGAGTATTTTATGTATATGTATGGCATAAGTTCTATGTACCTATATGCACGGCTTA 18 24577628 0.987528605 11 18 158 1 1.342422681 0.227272727 0.166666667 0.318181818 18 0 0 22 2R:24577553-24577648 6 Start1 FBtr0089867|FBtr0343485|FBtr0089868|FBtr0305054 24577260|24577463|24577463|24577463 24577676|24577676|24577676|24577676 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2R + 24577613 24577640 3'utr Start1 FlyBase G14505.1 ATGGCATAAGTTCTATGTACCTATATGC 5 24577628 0.873907199 2 5 36 1 0.77815125 0.5 0.2 0.333333333 5 0 0 6 2R:24577613-24577640 6 7 1392 FBgn0035028 314 17.47 26.84 0.022292994 0.400686892 0.260804769 1 1 1 0.15 dme-miR-932-5p 7mer-m8 GGAATTG 2R 24671705 24671711 - 2R_24671705_24671711_- 0.690092891 0.681202989 0.68564794 0.006286109 Mmp1 FBtr0304005|FBtr0304008|FBtr0273263|FBtr0304009|FBtr0304011|FBtr0304010|FBtr0306656 24671292|24671292|24671292|24671292|24671292|24671292|24671292 24673278|24672142|24672142|24672765|24672765|24673278|24673278 2R - 24671686 24671763 3'utr Mmp1 FlyBase G26433.1 GCTGTTTTGGTAATGACAAATTGCGATATTAAATTTAACGAGCCATATGCAAGGAATTGGAGAGAACCAAACAAAAAT 51 24671716 0.865118391 8 43 256 0.836065574 1.008600172 0.229508197 0.176470588 0.31147541 51 6 4 51 2R:24671686-24671763 7 Mmp1 FBtr0304011|FBtr0306656|FBtr0304009|FBtr0304010|FBtr0273263|FBtr0304005|FBtr0304008 24671292|24671292|24671292|24671292|24671292|24671292|24671292 24672765|24673278|24672765|24673278|24672142|24673278|24672142 GGAATTG 7mer-m8 dme-miR-932-5p 2R - 24671689 24671762 3'utr Mmp1 FlyBase G19998.1 CTGTTTTGGTAATGACAAATTGCGATATTAAATTTAACGAGCCATATGCAAGGAATTGGAGAGAACCAAACAAA 23 24671716 0.975477956 4 20 124 0.868421053 1.51851394 0.184210526 0.47826087 0.684210526 23 5 0 33 2R:24671689-24671762 7 23 1393 FBgn0035049 2672.446667 111.6666667 172.33 0.008606346 0.205970149 0.133464864 5 5 5 0.15 dme-miR-1007-3p 7mer-m8 TGAGCTT 2R 24766341 24766347 + 2R_24766341_24766347_+ 0.620167139 0.620203437 0.620185288 2.57E-05 CG3894 FBtr0300130 24766264 24766750 2R + 24766331 24766412 3'utr CG3894 FlyBase G19117.1 GAAGTGTGCATGAGCTTGGGTCGTGATAGTCTGTTTACCCATATATATATTGTATACGCCTGCAGCGCTAGTGAAGGGCCCT 24 24766363 0.953718487 13 23 171 0.931034483 1.431363764 0.24137931 0.208333333 0.344827586 24 2 0 27 2R:24766331-24766412 7 CG3894 FBtr0300130 24766264 24766750 TGAGCTT 7mer-m8 dme-miR-1007-3p 2R + 24766317 24766373 3'utr CG3894 FlyBase G14538.1 AATGCGTGTTTGGGGAAGTGTGCATGAGCTTGGGTCGTGATAGTCTGTTTACCCATA 17 24766362 0.771413649 9 16 135 0.965517241 1.146128036 0.034482759 0.529411765 0.724137931 17 0 1 28 2R:24766317-24766373 7 15.5 1394 FBgn0035059 104 8.213333333 12.5 0.149038462 1.887175325 1.24 -22 -21 -21.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2R 24766540 24766545 + 2R_24766540_24766545_+ 0.98113549 0.982138617 0.981637054 0.000709299 CG3894 FBtr0300130 24766264 24766750 2R + 24766485 24766599 3'utr CG3894 FlyBase G19119.1 TTGTAATTTCTGTAGATATATTTTATACTTTGGTTCTAGTTACCAATACACTCTTTACCTGGACGACCTATGTTGTAGATCATAATCCTCGCCATCGTTTGTGTATGTGTGGATC 217 24766539 0.805256069 16 209 1532 0.967479675 1.677606953 0.227642276 0.124423963 0.227642276 217 4 4 238 2R:24766485-24766599 6 CG3894 FBtr0300130 24766264 24766750 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2R + 24766513 24766642 3'utr CG3894 FlyBase G14540.2 TTTGGTTCTAGTTACCAATACACTCTTTACCTGGACGACCTATGTTGTAGATCATAATCCTCGCCATCGTTTGTGTATGTGTGGATCACCAACACCAGCGGAGGTCTCCTGGGCGCCCCGACTTTTAGCG 146 24766539 0.803524858 15 141 962 0.969026549 1.641474111 0.230088496 0.431506849 0.632743363 146 3 4 219 2R:24766513-24766642 6 148 1395 FBgn0035059 104 8.213333333 12.5 1.423076923 18.01948052 11.84 1 1 1 0.15 dme-miR-304-5p 6mer2-7 GAGATT 2R 24788051 24788056 - 2R_24788051_24788056_- 0.997941677 0.99791219 0.997926934 2.09E-05 Reg-5 FBtr0072427|FBtr0305671 24788006|24788006 24788287|24788287 2R - 24788007 24788096 3'utr Reg-5 FlyBase G26491.1 AATTTTATTTATTCGCGTGCATTAGTCGTAAGATCACATAGAGATTCTTGAGTAATAAACCGCATGATGATTATCATTGTTACGAACGTA 57 24788075 0.874270557 13 56 401 0.970588235 1.819543936 0.235294118 0.175438596 0.308823529 57 2 0 66 2R:24788007-24788096 6 Reg-5 FBtr0305671|FBtr0072427 24788006|24788006 24788287|24788287 GAGATT 6mer2-7 dme-miR-304-5p 2R - 24788011 24788090 3'utr Reg-5 FlyBase G20034.1 ATTTATTCGCGTGCATTAGTCGTAAGATCACATAGAGATTCTTGAGTAATAAACCGCATGATGATTATCATTGTTACGAA 42 24788058 0.873442876 9 41 300 0.984126984 1.792391689 0.111111111 0.30952381 0.53968254 42 1 0 62 2R:24788011-24788090 6 24.5 1396 FBgn0015801 337.6666667 24.48 36.89333333 0.072556762 1.000816993 0.664076617 19 2 10.5 0.15 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 24788132 24788138 - 2R_24788132_24788138_- 0.802270557 0.802193353 0.802231955 5.46E-05 Reg-5 FBtr0072427|FBtr0305671 24788006|24788006 24788287|24788287 2R - 24788111 24788284 3'utr Reg-5 FlyBase G26492.1 CGCGGTCAGAGGATCCGCAGGCCTAGACCTAAGTCCTTGTGTGAATGTGATAGAGCAGATGAGGAGATCCTGCATCATAGAGTGCGAGAGTGAACGTGTGAGTCTTCTAGTTGTAGCCGTTTGAGGAGTTTTCTTGAATGCACTTGAGCTTTAATGGAATTTCGTATCGTATTC 597 24788140 0.82031255 30 572 4538 0.957983193 2.136086097 0.256302521 0.162479062 0.299719888 597 26 4 684 2R:24788111-24788284 7 Reg-5 FBtr0305671|FBtr0072427 24788006|24788006 24788287|24788287 AGCTTTA 7mer-A1 dme-miR-79-3p 2R - 24788113 24788271 3'utr Reg-5 FlyBase G20035.1 TCCGCAGGCCTAGACCTAAGTCCTTGTGTGAATGTGATAGAGCAGATGAGGAGATCCTGCATCATAGAGTGCGAGAGTGAACGTGTGAGTCTTCTAGTTGTAGCCGTTTGAGGAGTTTTCTTGAATGCACTTGAGCTTTAATGGAATTTCGTATCGTAT 366 24788140 0.849085515 30 360 2638 0.983576642 2.731588765 0.28649635 0.366120219 0.576642336 366 9 0 539 2R:24788113-24788271 7 353 1397 FBgn0015801 337.6666667 24.48 36.89333333 1.045409674 14.41993464 9.568124322 2 2 2 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2R 24886342 24886349 + 2R_24886342_24886349_+ 0.636939824 0.636799447 0.636869636 9.93E-05 NKAIN FBtr0301847|FBtr0301847|FBtr0301847|FBtr0305056|FBtr0305056|FBtr0305056|FBtr0301849|FBtr0301849|FBtr0301849|FBtr0301848|FBtr0301848|FBtr0301848 24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969 24886945|24886945|24886945|24888615|24888615|24888615|24886945|24886945|24886945|24886945|24886945|24886945 2R + 24886246 24886382 5'utr NKAIN FlyBase G19151.1 ATTCAGATACGTGCGATCAGTAGAGACTTTCCTCGAATTGTGATAGAAGGCGTGGAAAGTCGTGACAGAATGCAAGCCTAACAATTTTATGTTGATCTGTGATAACTGAAAACAAATATGAACGACAAACGATAATT 474 24886341 0.985875411 25 442 3704 0.93554007 1.729974286 0.418118467 0.175105485 0.318815331 474 28 9 537 2R:24886246-24886382 8 NKAIN FBtr0301848|FBtr0301848|FBtr0301848|FBtr0301849|FBtr0301849|FBtr0301849|FBtr0305056|FBtr0305056|FBtr0305056|FBtr0301847|FBtr0301847|FBtr0301847 24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969 24886945|24886945|24886945|24886945|24886945|24886945|24888615|24888615|24888615|24886945|24886945|24886945 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 24886254 24886407 5'utr NKAIN FlyBase G14567.1 ACGTGCGATCAGTAGAGACTTTCCTCGAATTGTGATAGAAGGCGTGGAAAGTCGTGACAGAATGCAAGCCTAACAATTTTATGTTGATCTGTGATAACTGAAAACAAATATGAACGACAAACGATAATTTGAAAAACGAAAATGTCACAAAATC 317 24886341 0.985235473 28 290 2370 0.910714286 1.569267478 0.390625 0.32278481 0.522321429 316 30 10 408 2R:24886254-24886407 8 277.5 1398 FBgn0085442 1933.686667 63.05666667 96.30333333 0.143508255 4.40080351 2.881520197 1 1 1 0.15 dme-miR-263a-5p 6mer3-8 GTGCCA 2R 24886886 24886891 + 2R_24886886_24886891_+ 0.914356792 0.957109521 0.935733157 0.030230724 NKAIN FBtr0301847|FBtr0305056|FBtr0301849|FBtr0301848 24885969|24885969|24885969|24885969 24886945|24888615|24886945|24886945 2R + 24886857 24886919 5'utr NKAIN FlyBase G19157.1 ATTTAGCCATGCGAATTGTGCGTAGACTGGTGCCAATTCTCGAAGAGATTGAACGCGTTTCCA 111 24886879 0.718578461 11 105 670 0.939849624 1.795880017 0.15037594 0.144144144 0.285714286 111 7 1 125 2R:24886857-24886919 6 NKAIN FBtr0301848|FBtr0301849|FBtr0305056|FBtr0301847 24885969|24885969|24885969|24885969 24886945|24886945|24888615|24886945 GTGCCA 6mer3-8 dme-miR-263a-5p 2R + 24886744 24886912 5'utr NKAIN FlyBase G14570.1 CGTATAGAAATGTTAAGCCTAGTATTAAGCTTGAGGCCACAAAACGCAAGAGCAGAGCAGATCTAAATCCATTTAGCGTAGACACTATTTACTGTTTTAGATAGATCCCTCATATTTAGCCATGCGAATTGTGCGTAGACTGGTGCCAATTCTCGAAGAGATTGAACGC 129 24886880 0.979568581 24 119 828 0.927884615 1.984527313 0.158653846 0.395348837 0.625 129 14 1 193 2R:24886744-24886912 6 100 1399 FBgn0085442 1933.686667 63.05666667 96.30333333 0.051714687 1.585875139 1.038385656 7 6 6.5 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2R 24888583 24888589 + 2R_24888583_24888589_+ 0.671649767 0.671794478 0.671722123 0.000102318 NKAIN FBtr0305056|FBtr0301851|FBtr0343497 24885969|24888369|24887234 24888615|24888615|24888615 2R + 24888573 24888610 3'utr NKAIN FlyBase G19161.1 CTGTCGTTTTACCAAAGTGCCTTTGTAAATAAATACTT 9 24888595 0.652906795 5 8 65 0.916666667 0.740362689 0.083333333 0.333333333 0.5 9 0 1 11 2R:24888573-24888610 7 NKAIN FBtr0343497|FBtr0301851|FBtr0305056 24887234|24888369|24885969 24888615|24888615|24888615 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 24888565 24888599 3'utr NKAIN FlyBase G14573.1 GTAAGTTTCTGTCGTTTTACCAAAGTGCCTTTGTA 21 24888594 0.744534432 7 20 176 0.9375 1.477121255 0.15625 0.476190476 0.65625 21 2 0 30 2R:24888565-24888599 7 15 1400 FBgn0085442 1933.686667 63.05666667 96.30333333 0.007757203 0.237881271 0.155757848 -12 -11 -11.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-m8 CTGTGAT 2R 24909999 24910005 + 2R_24909999_24910005_+ 0.661075726 0.661615532 0.661345629 0.000381696 NaCP60E FBtr0333816|FBtr0333816|FBtr0333816|FBtr0333815|FBtr0333815|FBtr0333815 24905200|24905200|24905200|24907305|24907305|24907305 24920265|24920265|24920265|24920265|24920265|24920265 2R + 24909971 24910022 3'utr NaCP60E FlyBase G19162.1 TTAGCATCTCAAATGAGATACGCAAAATCTGTGATCAAATCCACGCCCCCTT 12 24909998 0.977141563 3 9 65 0.769230769 0.698970004 0 0.083333333 0.153846154 12 2 1 10 2R:24909971-24910022 7 NaCP60E FBtr0333816|FBtr0333816|FBtr0333816|FBtr0333815|FBtr0333815|FBtr0333815 24905200|24905200|24905200|24907305|24907305|24907305 24920265|24920265|24920265|24920265|24920265|24920265 CTGTGAT 7mer-m8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 24909984 24910012 3'utr NaCP60E FlyBase G14574.1 TGAGATACGCAAAATCTGTGATCAAATCC 6 24909998 0.954754139 2 5 23 0.833333333 0.698970004 0.166666667 0 0 6 1 0 5 2R:24909984-24910012 7 8.5 1401 FBgn0085434 365.8266667 3.443333333 5.213333333 0.023235048 2.468538238 1.630434783 1 1 1 0.15 dme-miR-283-5p 6mer3-8 TGATAT 2R 2494782 2494787 - 2R_2494782_2494787_- 0.997733235 0.921980209 0.959856722 0.05356546 MFS17 FBtr0301780|FBtr0301779|FBtr0301781|FBtr0334936|FBtr0334935 2494740|2494740|2494740|2494740|2494740 2521422|2494825|2494825|2515854|2494965 2R - 2494753 2494807 3'utr MFS17 FlyBase G19280.1 TAAAACTGTTATACCAAATTTGATATATGTTATATGTTCGCTGTTATGATAATAA 18 2494788 0.711138201 7 17 147 0.964285714 1.130333768 0.178571429 0.388888889 0.607142857 18 0 1 27 2R:2494753-2494807 6 MFS17 FBtr0334935|FBtr0334936|FBtr0301781|FBtr0301779|FBtr0301780 2494740|2494740|2494740|2494740|2494740 2494965|2515854|2494825|2494825|2521422 TGATAT 6mer3-8 dme-miR-283-5p 2R - 2494781 2494811 3'utr MFS17 FlyBase G14656.1 AAATTAAAACTGTTATACCAAATTTGATATA 10 2494788 0.67136309 4 10 77 1 1.230448921 0 0.4 0.647058824 10 0 0 17 2R:2494781-2494811 6 12 1402 FBgn0058263 777.1033333 67.95666667 103.9733333 0.015441962 0.176583117 0.115414209 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 24959960 24959965 - 2R_24959960_24959965_- 0.755067598 0.75492173 0.754994664 0.000103167 CG2765 FBtr0113119|FBtr0113119|FBtr0113119|FBtr0308687|FBtr0308687|FBtr0308687|FBtr0308686|FBtr0308686|FBtr0308686|FBtr0113118|FBtr0113118|FBtr0113118 24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839 24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846 2R - 24959930 24959996 3'utr CG2765 FlyBase G26547.2 AAATCCCACCAAAGGTGACCTGGATACCCGACTGTGAGTCCCTGGTTCGGCAACGAGGACTGCAGAG 41 24959951 0.916515296 7 39 190 0.93877551 1.361727836 0.265306122 0.170731707 0.306122449 41 2 1 46 2R:24959930-24959996 6 CG2765 FBtr0308686|FBtr0308686|FBtr0308686|FBtr0113118|FBtr0113118|FBtr0113118|FBtr0113119|FBtr0113119|FBtr0113119|FBtr0308687|FBtr0308687|FBtr0308687 24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839 24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 24959932 24959993 3'utr CG2765 FlyBase G20073.1 TCCCACCAAAGGTGACCTGGATACCCGACTGTGAGTCCCTGGTTCGGCAACGAGGACTGCAG 30 24959951 0.947729707 9 25 147 0.830188679 1.166331422 0.471698113 0.466666667 0.698113208 30 7 2 44 2R:24959932-24959993 6 28.5 1403 FBgn0035087 3658.343333 190.7466667 291.4366667 0.007790412 0.149412834 0.097791401 -14 -14 -14 0.15 dme-miR-13b-2-5p 7mer-m1 TTGACGC 2R 24991134 24991140 - 2R_24991134_24991140_- 0.829691501 0.829523319 0.82960741 0.000118935 zip FBtr0302575 24990946 24991607 2R - 24991025 24991163 stop_codon zip FlyBase G26564.1 TTAGATGGAGAGGATTCTGCCAATTGACGCGTTAATTATTAGATGAAGAAAAAGTTGAATCGCAGGAAGAAGGTGATGATGAAGAGCAAAATAAACGATTATATTTAATGTTTCTTTTATATAATTTCTCTGTTATTTT 31 24991140 0.972058515 12 31 191 1 1.591064607 0.230769231 0.193548387 0.358974359 31 0 0 39 2R:24991025-24991163 7 zip FBtr0302575 24990946 24991607 TTGACGC 7mer-m1 dme-miR-13b-2-5p 2R - 24991057 24991170 stop_codon zip FlyBase G20095.1 TGAATCATTAGATGGAGAGGATTCTGCCAATTGACGCGTTAATTATTAGATGAAGAAAAAGTTGAATCGCAGGAAGAAGGTGATGATGAAGAGCAAAATAAACGATTATATTTA 27 24991140 0.909120612 11 26 136 0.972222222 1.544068044 0.444444444 0.259259259 0.444444444 27 1 0 35 2R:24991057-24991170 7 15 1404 FBgn0265434 6756.406667 120.88 185.8533333 0.002220115 0.124090007 0.080708803 0 0 0 0.15 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 25073733 25073738 - 2R_25073733_25073738_- 0.999999959 0.980737283 0.990368621 0.013620786 gol FBtr0300178 25073667 25074917 2R - 25073723 25073752 3'utr gol FlyBase G26605.1 TGAAACAAGACCATGCTGTGCTAGACACCT 25 25073739 0.704674315 3 25 85 1 1.477121255 0 0.2 0.333333333 25 0 0 30 2R:25073723-25073752 6 gol FBtr0300178 25073667 25074917 GCTGTG 6mer2-7 dme-miR-1008-3p 2R - 25073723 25073760 3'utr gol FlyBase G20122.1 ACCAACTTTGAAACAAGACCATGCTGTGCTAGACACCT 23 25073731 0.817010128 3 21 89 0.897435897 0.942008053 0.025641026 0.47826087 0.692307692 23 1 3 35 2R:25073723-25073760 6 24 1405 FBgn0004919 407.4766667 15.40666667 23.45 0.058899078 1.5577672 1.023454158 1 -7 -3 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 25073939 25073946 - 2R_25073939_25073946_- 0.622551163 0.623935334 0.623243249 0.000978706 gol FBtr0300178 25073667 25074917 2R - 25073929 25073988 3'utr gol FlyBase G26606.1 CATTTTTATGTACTTACATTATTATTGCTTAATTCGTTTGATTGCATTTATTTTTCAATT 165 25073947 0.815672286 8 163 2036 0.987068966 2.359835482 0.409482759 0.303030303 0.504310345 165 3 0 229 2R:25073929-25073988 8 gol FBtr0300178 25073667 25074917 TGCATTTA 8mer-A1 dme-miR-277-3p 2R - 25073890 25073987 3'utr gol FlyBase G20123.1 ATTTTTATGTACTTACATTATTATTGCTTAATTCGTTTGATTGCATTTATTTTTCAATTGTTTTTATAGCTCATACATAAATTATTTATATTCCATTT 103 25073947 0.992849771 9 102 1278 0.985915493 2.146128036 0.35915493 0.281553398 0.478873239 103 2 0 140 2R:25073890-25073987 8 126 1406 FBgn0004919 407.4766667 15.40666667 23.45 0.30922016 8.178277802 5.373134328 1 1 1 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 2R 25074028 25074033 - 2R_25074028_25074033_- 0.554190514 0.541490785 0.547840649 0.008980044 gol FBtr0300178 25073667 25074917 2R - 25074000 25074085 3'utr gol FlyBase G26607.1 AATCGCAGCCAGCGCATATTGTGAATCAATGACTGCTGTAATATCACAGGTGCCAAAGTATTTGCTTTTAGTTTTTTATATTAAAT 47 25074053 0.880427914 13 45 297 0.950819672 1.286306739 0.180327869 0.276595745 0.442622951 47 1 2 58 2R:25074000-25074085 6 gol FBtr0300178 25073667 25074917 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 25074012 25074169 3'utr gol FlyBase G20124.1 AAGCTGTAGAAAAGGTAATGGTAAATGCAATAAATATAGCAAGATCACCGACTGTGTTGCTAGTCACCCATAGACGGCTACACAAATCGCAGCCAGCGCATATTGTGAATCAATGACTGCTGTAATATCACAGGTGCCAAAGTATTTGCTTTTAGTTT 63 25074049 0.814913105 23 62 377 0.978947368 1.968482949 0.189473684 0.428571429 0.621052632 63 2 0 93 2R:25074012-25074169 6 12 1407 FBgn0004919 407.4766667 15.40666667 23.45 0.029449539 0.7788836 0.511727079 20 16 18 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2R 25074104 25074110 - 2R_25074104_25074110_- 0.809913122 0.79528448 0.802598801 0.010343982 gol FBtr0300178|FBtr0306330 25073667|25072625 25074917|25074917 2R - 25074086 25074153 3'utr gol FlyBase G26607.2 AATGGTAAATGCAATAAATATAGCAAGATCACCGACTGTGTTGCTAGTCACCCATAGACGGCTACACA 30 25074113 0.816100577 11 27 161 0.885714286 1.014240439 0 0.166666667 0.285714286 30 2 2 31 2R:25074086-25074153 7 gol FBtr0300178|FBtr0306330 25073667|25072625 25074917|25074917 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R - 25074012 25074169 3'utr gol FlyBase G20124.1 AAGCTGTAGAAAAGGTAATGGTAAATGCAATAAATATAGCAAGATCACCGACTGTGTTGCTAGTCACCCATAGACGGCTACACAAATCGCAGCCAGCGCATATTGTGAATCAATGACTGCTGTAATATCACAGGTGCCAAAGTATTTGCTTTTAGTTT 63 25074114 0.814913105 23 62 377 0.978947368 1.968482949 0.189473684 0.428571429 0.621052632 63 2 0 93 2R:25074012-25074169 7 20 1408 FBgn0004919 407.4766667 15.40666667 23.45 0.049082565 1.298139334 0.852878465 3 4 3.5 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 25074446 25074453 - 2R_25074446_25074453_- 0.440695961 0.494528685 0.467612323 0.038065467 gol FBtr0300178|FBtr0306330 25073667|25072625 25074917|25074917 2R - 25074421 25074480 3'utr gol FlyBase G26609.3 GTGTAAATAAACTCATTTAAGAGCAGTGTACTTAAAAAAGCTGATACAAAGACTTCCATT 379 25074454 0.887832611 12 373 1733 0.984581498 2.650307523 0.085903084 0.166226913 0.303964758 379 7 0 447 2R:25074421-25074480 8 gol FBtr0300178|FBtr0306330 25073667|25072625 25074917|25074917 GTACTTAA 8mer-A1 dme-miR-252-5p 2R - 25074423 25074480 3'utr gol FlyBase G20126.1 GTGTAAATAAACTCATTTAAGAGCAGTGTACTTAAAAAAGCTGATACAAAGACTTCCA 273 25074454 0.880422527 9 267 1120 0.990049751 2.599883072 0.07960199 0.380952381 0.57960199 273 4 0 398 2R:25074423-25074480 8 318.5 1409 FBgn0004919 407.4766667 15.40666667 23.45 0.781639848 20.67286889 13.58208955 1 1 1 0.15 dme-miR-34-5p 6mer2-7 ACTGCC 2R 3900374 3900379 - 2R_3900374_3900379_- 0.999018249 0.987505234 0.993261742 0.00814092 uex FBtr0302226 3900283 3900785 2R - 3900355 3900412 3'utr uex FlyBase G19352.1 TTAGAAGGGCTAAACTCGATGTTAAAAAAATAAACTGCCTGTTTAACTGTATTCCTTA 21 3900371 0.928757019 9 17 173 0.869565217 1 0.043478261 0.095238095 0.173913043 21 2 1 20 2R:3900355-3900412 6 uex FBtr0302226 3900283 3900785 ACTGCC 6mer2-7 dme-miR-34-5p 2R - 3900327 3900436 3'utr uex FlyBase G14709.1 AGTTAATCTTCCTTAGAAATGGTTTTAGAAGGGCTAAACTCGATGTTAAAAAAATAAACTGCCTGTTTAACTGTATTCCTTATTAAACTTAAATGTGTTTGTGAACACAG 20 3900372 0.850428671 11 17 157 1 1.505149978 0.09375 0.5 0.6875 20 0 0 32 2R:3900327-3900436 6 11.5 1410 FBgn0262124 3391.336667 116.7833333 178.7433333 0.003390993 0.098472956 0.064338064 -8 -7 -7.5 0.15 dme-miR-79-3p 7mer-m8 TAGCTTT 2R 3900593 3900599 - 2R_3900593_3900599_- 0.620145656 0.620202359 0.620174008 4.01E-05 uex FBtr0302226 3900283 3900785 2R - 3900577 3900671 3'utr uex FlyBase G19353.1 ACAATTTTTATACTATACCATAGGTTTTCCCATATTAATTATATTCCTAAACATCTTAAACATAAAAAAAAATAGCTTTTCCAAAACTGTGTATG 17 3900599 0.983686956 7 13 101 0.833333333 0.875061263 0 0.058823529 0.111111111 17 2 1 15 2R:3900577-3900671 7 uex FBtr0302226 3900283 3900785 TAGCTTT 7mer-m8 dme-miR-79-3p 2R - 3900565 3900608 3'utr uex FlyBase G14711.1 AAAAAAAAATAGCTTTTCCAAAACTGTGTATGAATTTATATATA 7 3900594 0.981558222 3 6 46 0.888888889 0.903089987 0 0.285714286 0.444444444 7 1 0 8 2R:3900565-3900608 7 9 1411 FBgn0262124 3391.336667 116.7833333 178.7433333 0.002653821 0.077065791 0.050351528 0 -5 -2.5 0.15 dme-miR-33-5p 6mer2-7 AATGCA 2R 3900774 3900779 - 2R_3900774_3900779_- 0.694553592 0.693854705 0.694204149 0.000494197 uex FBtr0302226 3900283 3900785 2R - 3900757 3900803 stop_codon uex FlyBase G19354.1 AAGCAAAGTAAGCCCTAAACACAAAATGCAGGCCACATTTATATATA 47 3900777 0.993770549 2 44 124 0.979166667 1.672097858 0.0625 0.043478261 0.083333333 46 1 0 47 2R:3900757-3900803 6 uex FBtr0302226 3900283 3900785 AATGCA 6mer2-7 dme-miR-33-5p 2R - 3900739 3900804 stop_codon uex FlyBase G14712.1 CAAGCAAAGTAAGCCCTAAACACAAAATGCAGGCCACATTTATATATATGCAGTTAATAAAATAAT 14 3900777 0.999498379 3 14 60 1 1.278753601 0 0.214285714 0.421052632 14 0 0 19 2R:3900739-3900804 6 27 1412 FBgn0262124 3391.336667 116.7833333 178.7433333 0.007961463 0.231197374 0.151054585 -2 -2 -2 0.15 dme-miR-305-5p 6mer3-8 AGTACA 2R 4564541 4564546 + 2R_4564541_4564546_+ 0.99999774 0.999999994 0.999998867 1.63E-06 Stlk FBtr0111111|FBtr0308810 4564500|4564500 4565281|4564987 2R + 4564514 4564553 3'utr Stlk FlyBase G12823.1 TGTTTTTCTGATCACTTCGGTGCCTTTAGTACAGAATCTA 19 4564539 0.599846623 7 19 150 1 1.431363764 0.407407407 0.315789474 0.518518519 19 0 0 27 2R:4564514-4564553 6 Stlk FBtr0111111|FBtr0308810 4564500|4564500 4565281|4564987 AGTACA 6mer3-8 dme-miR-305-5p 2R + 4564519 4564555 3'utr Stlk FlyBase G9785.1 TTCTGATCACTTCGGTGCCTTTAGTACAGAATCTACA 13 4564540 0.626645518 5 12 104 0.954545455 1.322219295 0 0.461538462 0.681818182 13 1 0 21 2R:4564519-4564555 6 14.5 1413 FBgn0046692 309.34 20.17666667 30.87 0.04687399 0.718651908 0.469711694 2 1 1.5 0.15 dme-miR-276a-3p 6mer2-7 GTTCCT 2R 4673515 4673520 + 2R_4673515_4673520_+ 0.873987356 0.999998365 0.93699286 0.089103233 CG17883 FBtr0111291|FBtr0334995|FBtr0111292|FBtr0334996 4673477|4673477|4673085|4673477 4673639|4673639|4673639|4673639 2R + 4673497 4673583 3'utr CG17883 FlyBase G12882.1 ATATCGACATTTAAATTTGTTCCTTATACCGCGGTATAATCACATTCTCCCGAAATTCTGTGTTTTGGTGAAGACCTTATTTTAATA 26 4673514 0.747296779 11 23 240 0.941176471 1.505149978 0.147058824 0.192307692 0.382352941 26 2 0 32 2R:4673497-4673583 6 CG17883 FBtr0334996|FBtr0111292|FBtr0334995|FBtr0111291 4673477|4673085|4673477|4673477 4673639|4673639|4673639|4673639 GTTCCT 6mer2-7 dme-miR-276a-3p 2R + 4673505 4673533 3'utr CG17883 FlyBase G9828.1 ATTTAAATTTGTTCCTTATACCGCGGTAT 7 4673521 0.708839233 4 6 65 0.9 0.954242509 0.2 0.428571429 0.6 7 1 0 9 2R:4673505-4673533 6 9 1414 FBgn0040005 878.32 65.69666667 100.4666667 0.010246835 0.136993252 0.089581951 1 -6 -2.5 0.15 dme-bantam-3p 6mer3-8 TGATCT 2R 4817380 4817385 - 2R_4817380_4817385_- 0.999999931 0.999996365 0.999998148 2.47E-06 CG17528 FBtr0111277 4815424 4817448 2R - 4817356 4817429 3'utr CG17528 FlyBase G19500.1 AAAAAAAGCAACTTTCACTCTTAAACGACGAACTTTTGTATTTCTGATCTAAAAATGCTTTTATATTAGCCCTA 38 4817386 0.863462485 11 37 295 1 1.591064607 0.128205128 0.054054054 0.102564103 37 0 0 39 2R:4817356-4817429 6 CG17528 FBtr0111277|FBtr0111274 4815424|4817259 4817448|4817448 TGATCT 6mer3-8 dme-bantam-3p 2R - 4817349 4817428 3'utr CG17528 FlyBase G14816.1 AAAAAAGCAACTTTCACTCTTAAACGACGAACTTTTGTATTTCTGATCTAAAAATGCTTTTATATTAGCCCTAATTTATT 26 4817386 0.984012037 10 24 207 0.976190476 1.311753861 0.119047619 0.423076923 0.642857143 26 0 1 41 2R:4817349-4817428 6 18 1415 FBgn0261387 730.0966667 30.65666667 47.04333333 0.02465427 0.587147983 0.382625948 1 1 1 0.15 dme-miR-92b-3p 7mer-A1 TGCAATA 2R 5117426 5117432 - 2R_5117426_5117432_- 0.771942748 0.773507617 0.772725182 0.001106551 gus FBtr0309850|FBtr0309846|FBtr0309848|FBtr0309851 5117211|5117211|5116988|5117211 5117662|5117662|5117662|5117662 2R - 5117356 5117628 NoAnnotation G19516.1 TTTTTGCTGCATGTGATGAAAGCAGCAAATACTAATTGTGTTAGATTATAATAGTATTAGATCAATGTTTGTCTGTCCTCCAACAGGAAAATCATAGGTATACAATTCGTAATAATACTTTACTTAAGCTATAAAGATTGATTGTATATTAAGAAGCATTCAAATAATAGTATGTACACGGAATGACATCTCATCTTGCAATAAATTGGAGAATCGAGTTTCTTCATGTAACATTATTTAAAAACTATACTCACTTCGTGTTATATAAAAAGC 279 5117445 0.969244809 47 268 2013 0.964285714 1.846337112 0.090659341 0.222222222 0.403846154 279 9 4 351 2R:5117356-5117628 7 gus FBtr0309846|FBtr0309852|FBtr0309849|FBtr0309850|FBtr0309847|FBtr0309848|FBtr0309851 5117211|5117330|5117330|5117211|5117392|5116988|5117211 5117662|5117662|5117662|5117662|5117662|5117662|5117662 TGCAATA 7mer-A1 dme-miR-92b-3p 2R - 5117401 5117629 3'utr gus FlyBase G14831.1 ATTTTTGCTGCATGTGATGAAAGCAGCAAATACTAATTGTGTTAGATTATAATAGTATTAGATCAATGTTTGTCTGTCCTCCAACAGGAAAATCATAGGTATACAATTCGTAATAATACTTTACTTAAGCTATAAAGATTGATTGTATATTAAGAAGCATTCAAATAATAGTATGTACACGGAATGACATCTCATCTTGCAATAAATTGGAGAATCGAGTTTCTTCATG 177 5117445 0.982343248 37 170 1275 0.960784314 2.389166084 0.094117647 0.299435028 0.51372549 177 10 0 245 2R:5117401-5117629 7 91 1416 FBgn0026238 600.2866667 48.80333333 74.76 0.151594238 1.864626733 1.217228464 13 13 13 0.15 dme-miR-1003-3p 8mer-A1 ATGTGAGA 2R 5154671 5154678 + 2R_5154671_5154678_+ 0.64356246 0.643565845 0.643564152 2.33E-06 Atf6 FBtr0086080|FBtr0086079 5154029|5154029 5154756|5154756 2R + 5154646 5154696 3'utr Atf6 FlyBase G12959.1 TAAGTTTTATTAATTAAAACAGCCTATGTGAGAGATGTAGTTTTGTAAAAT 11 5154671 0.976339266 4 11 78 1 1.113943352 0.230769231 0.181818182 0.307692308 11 0 0 13 2R:5154646-5154696 8 Atf6 FBtr0086079|FBtr0086080 5154029|5154029 5154756|5154756 ATGTGAGA 8mer-A1 dme-miR-1003-3p 2R + 5154656 5154696 3'utr Atf6 FlyBase G9888.1 TAATTAAAACAGCCTATGTGAGAGATGTAGTTTTGTAAAAT 8 5154673 0.986396505 4 7 54 0.916666667 1.041392685 0.25 0.375 0.583333333 8 1 0 11 2R:5154656-5154696 8 9.5 1417 FBgn0033010 930.9533333 36.95333333 56.66 0.010204593 0.257081003 0.167666784 0 -2 -1 0.15 dme-miR-999-3p 6mer3-8 AGTTAA 2R 5295929 5295934 + 2R_5295929_5295934_+ 0.999977126 0.999998439 0.999987783 1.51E-05 d4 FBtr0086082|FBtr0335258|FBtr0086083|FBtr0111115 5295893|5295893|5295893|5295893 5295965|5295965|5295965|5295965 2R + 5295925 5295954 3'utr d4 FlyBase G12979.1 TATAAGTTAATCTTCTCATAAATATAAAAA 14 5295932 0.829688727 6 11 112 0.785714286 0.740362689 0 0 0 14 2 1 11 2R:5295925-5295954 6 d4 FBtr0086083|FBtr0111115|FBtr0086082|FBtr0335258 5295893|5295893|5295893|5295893 5295965|5295965|5295965|5295965 AGTTAA 6mer3-8 dme-miR-999-3p 2R + 5295917 5295956 3'utr d4 FlyBase G9903.1 TCACCAATTATAAGTTAATCTTCTCATAAATATAAAAAAC 14 5295932 0.706228405 5 13 122 0.882352941 1.176091259 0.058823529 0.214285714 0.352941176 14 2 0 15 2R:5295917-5295956 6 14 1418 FBgn0033015 779.7666667 52.91333333 81.00666667 0.017954089 0.264583596 0.172825282 -3 -3 -3 0.15 dme-miR-34-5p 8mer-A1 CACTGCCA 2R 5447156 5447163 + 2R_5447156_5447163_+ 0.678406859 0.678395895 0.678401377 7.78E-06 laccase2 FBtr0299918|FBtr0301063 5446975|5446975 5447974|5447298 2R + 5447113 5447171 3'utr laccase2 FlyBase G13033.1 ATTTAAAACGCACAATGCACTGTTTTTATTTAATAATTTTAAACACTGCCAATGTCCAA 17 5447150 0.981495538 9 16 121 1 1.230448921 0.058823529 0 0 17 0 0 17 2R:5447113-5447171 8 laccase2 FBtr0301063|FBtr0299918 5446975|5446975 5447298|5447974 CACTGCCA 8mer-A1 dme-miR-34-5p 2R + 5447114 5447168 3'utr laccase2 FlyBase G9945.1 TTTAAAACGCACAATGCACTGTTTTTATTTAATAATTTTAAACACTGCCAATGTC 8 5447142 0.983091335 8 8 63 1 1.176091259 0.2 0.5 0.733333333 8 0 0 15 2R:5447114-5447168 8 9 1419 FBgn0259247 554.2366667 21.22 32.31 0.01623855 0.424128181 0.278551532 6 14 10 0.15 dme-miR-276a-3p 6mer3-8 AGTTCC 2R 5609670 5609675 + 2R_5609670_5609675_+ 0.766832968 0.999152528 0.882992748 0.164274694 CG17508 FBtr0307172 5609514 5609994 2R + 5609632 5609738 3'utr CG17508 FlyBase G13043.1 CTGCATATATCAGGAACTCATTCTAAGGATTGGCTTTCAGTTCCCAGGAACCCTATTATATAGAAATTAGAATTGACCAAAGAATTTATTAAATTGCAAGAAAACCG 49 5609661 0.915205379 17 46 354 0.925925926 1.698970004 0.074074074 0.102040816 0.185185185 49 4 0 50 2R:5609632-5609738 6 CG17508 FBtr0307172 5609514 5609994 AGTTCC 6mer3-8 dme-miR-276a-3p 2R + 5609638 5609724 3'utr CG17508 FlyBase G9956.1 ATATCAGGAACTCATTCTAAGGATTGGCTTTCAGTTCCCAGGAACCCTATTATATAGAAATTAGAATTGACCAAAGAATTTATTAAA 30 5609661 0.877027844 14 30 207 1 1.653212514 0.111111111 0.333333333 0.555555556 30 0 0 45 2R:5609638-5609724 6 15 1420 FBgn0039970 517.7666667 53.29333333 81.50333333 0.028970579 0.281461096 0.184041552 9 9 9 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 2R 5609707 5609714 + 2R_5609707_5609714_+ 0.600004471 0.638524643 0.619264557 0.027237824 CG17508 FBtr0307172 5609514 5609994 2R + 5609632 5609738 3'utr CG17508 FlyBase G13043.1 CTGCATATATCAGGAACTCATTCTAAGGATTGGCTTTCAGTTCCCAGGAACCCTATTATATAGAAATTAGAATTGACCAAAGAATTTATTAAATTGCAAGAAAACCG 49 5609704 0.915205379 17 46 354 0.925925926 1.698970004 0.074074074 0.102040816 0.185185185 49 4 0 50 2R:5609632-5609738 8 CG17508 FBtr0307172 5609514 5609994 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 5609638 5609724 3'utr CG17508 FlyBase G9956.1 ATATCAGGAACTCATTCTAAGGATTGGCTTTCAGTTCCCAGGAACCCTATTATATAGAAATTAGAATTGACCAAAGAATTTATTAAA 30 5609704 0.877027844 14 30 207 1 1.653212514 0.111111111 0.333333333 0.555555556 30 0 0 45 2R:5609638-5609724 8 18 1421 FBgn0039970 517.7666667 53.29333333 81.50333333 0.034764695 0.337753315 0.220849863 3 3 3 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 2R 5609762 5609767 + 2R_5609762_5609767_+ 0.998973154 0.999624659 0.999298907 0.00046068 CG17508 FBtr0307172 5609514 5609994 2R + 5609751 5609793 3'utr CG17508 FlyBase G13044.1 AAATAGACAATTGTGTTTGGAGTGGGCATGCCCAACGTATTTT 10 5609761 0.761410487 7 10 61 1 1.041392685 0.181818182 0.1 0.181818182 10 0 0 11 2R:5609751-5609793 6 CG17508 FBtr0307172 5609514 5609994 TGTGTT 6mer3-8 dme-miR-317-3p 2R + 5609734 5609777 3'utr CG17508 FlyBase G9957.1 AACCGAAACAAAGTGTGAAATAGACAATTGTGTTTGGAGTGGGC 5 5609754 0.962587751 3 5 27 1 0.903089987 0 0.2 0.5 5 0 0 8 2R:5609734-5609777 6 5.5 1422 FBgn0039970 517.7666667 53.29333333 81.50333333 0.010622546 0.103202402 0.067481903 1 8 4.5 0.15 dme-miR-14-3p 6mer2-7 AGACTG 2R 5656095 5656100 + 2R_5656095_5656100_+ 0.999996507 0.999997517 0.999997012 7.07E-07 CG1344 FBtr0331967 5655809 5656778 2R + 5656046 5656228 3'utr CG1344 FlyBase G13063.1 TTCTCGTTCGCACTCCCACCAGCTGATTGTAATGGGTAGTCGGAGAACTAGACTGTAAAGTTTTCTCTTGTTTGTTCCTTTTTTTGTCCTAACAAATAAATGCTTGCTTACTTTTGTATTATAAAAAATCGACACCTCGGTATTTTTGTTTTTGATTAAGACTTAGTAATAGAATTGTAATCG 107 5656094 0.890763443 19 99 787 0.929133858 1.594760753 0.220472441 0.177570093 0.307086614 107 7 2 118 2R:5656046-5656228 6 CG1344 FBtr0331967 5655809 5656778 AGACTG 6mer2-7 dme-miR-14-3p 2R + 5656075 5656117 3'utr CG1344 FlyBase G9977.1 TAATGGGTAGTCGGAGAACTAGACTGTAAAGTTTTCTCTTGTT 22 5656101 0.766819584 4 21 134 1 1.477121255 0.1 0.227272727 0.433333333 22 0 0 30 2R:5656075-5656117 6 41 1423 FBgn0027507 843.1966667 42.83333333 65.52 0.048624481 0.957198444 0.625763126 1 -6 -2.5 0.15 dme-miR-31a-5p 6mer2-7 CTTGCC 2R 5656452 5656457 + 2R_5656452_5656457_+ 0.768276234 0.80023948 0.784257857 0.022601466 CG1344 FBtr0331967 5655809 5656778 2R + 5656409 5656475 3'utr CG1344 FlyBase G13064.1 CTATTCAATCGTCTTTATTCTGTGTTCATACATTTAAACAAGACTTGCCCTCCAAAAGCCTTGGAAA 16 5656454 0.902491671 5 15 87 0.954545455 1.322219295 0.181818182 0.25 0.454545455 16 1 0 21 2R:5656409-5656475 6 CG1344 FBtr0331967 5655809 5656778 CTTGCC 6mer2-7 dme-miR-31a-5p 2R + 5656404 5656489 3'utr CG1344 FlyBase G9979.1 TTCAACTATTCAATCGTCTTTATTCTGTGTTCATACATTTAAACAAGACTTGCCCTCCAAAAGCCTTGGAAATTTTACGTAACAAA 18 5656454 0.959291136 5 16 95 0.925925926 0.920818754 0.185185185 0.5 0.666666667 18 0 2 25 2R:5656404-5656489 6 12 1424 FBgn0027507 843.1966667 42.83333333 65.52 0.014231555 0.280155642 0.183150183 -2 -2 -2 0.15 dme-miR-308-3p 8mer-m1 CTGTGATT 2R 5656725 5656732 + 2R_5656725_5656732_+ 0.384692439 0.385559937 0.385126188 0.000613415 CG1344 FBtr0331967 5655809 5656778 2R + 5656694 5656737 3'utr CG1344 FlyBase G13066.1 CAGGTTATATGAGATTGTTTTTGAAAGCCCTCTGTGATTTCTTA 13 5656732 0.803696331 3 13 109 1 1.255272505 0.111111111 0.307692308 0.5 13 0 0 18 2R:5656694-5656737 8 CG1344 FBtr0331967 5655809 5656778 CTGTGATT 8mer-m1 dme-miR-308-3p 2R + 5656715 5656736 3'utr CG1344 FlyBase G9980.1 TGAAAGCCCTCTGTGATTTCTT 6 5656732 0.611158745 2 6 43 1 0.903089987 0 0.166666667 0.375 6 0 0 8 2R:5656715-5656736 8 7.5 1425 FBgn0027507 843.1966667 42.83333333 65.52 0.008894722 0.175097276 0.114468864 -7 -7 -7 0.15 dme-miR-283-5p 7mer-A1 GATATTA 2R 5677561 5677567 - 2R_5677561_5677567_- 0.782851404 0.782911824 0.782881614 4.27E-05 scaf FBtr0086061|FBtr0086060 5676748|5676748 5677716|5677716 2R - 5677559 5677606 3'utr scaf FlyBase G19676.1 ATTGCAATTTCGTTGGAGCTCAAAATGGAGGGCATTCCCGATATTATC 10 5677572 0.730026474 6 10 64 1 1.113943352 0 0.2 0.384615385 10 0 0 13 2R:5677559-5677606 7 scaf FBtr0086061|FBtr0086060 5676748|5676748 5677716|5677716 GATATTA 7mer-A1 dme-miR-283-5p 2R - 5677559 5677590 3'utr scaf FlyBase G14949.1 AGCTCAAAATGGAGGGCATTCCCGATATTATC 5 5677581 0.856020247 4 5 27 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2R:5677559-5677590 7 4.5 1426 FBgn0033033 687.87 27.26 41.96666667 0.006541934 0.165077036 0.107227959 5 14 9.5 0.15 dme-miR-190-5p 6mer3-8 ACATAT 2R 5704961 5704966 + 2R_5704961_5704966_+ 0.871788974 0.998868206 0.93532859 0.089858564 vlc FBtr0307530|FBtr0300503|FBtr0086039|FBtr0086040|FBtr0307531|FBtr0086041|FBtr0307532|FBtr0300502 5704918|5704918|5704918|5704918|5704918|5704918|5704918|5704918 5705439|5705439|5705439|5705439|5705439|5705439|5705439|5705439 2R + 5704905 5705002 stop_codon vlc FlyBase G13102.1 AGCAACGGAAGTTAAATAATGCTCACTGCGAATAGCAACTCATGCTTTCTATTTATACATATATTTTTAACTAACACACGTGTACCCCACAAAGGCAT 30 5704947 0.97739004 10 29 196 1 1.602059991 0.05 0.3 0.475 30 0 0 40 2R:5704905-5705002 6 vlc FBtr0307532|FBtr0300502|FBtr0307531|FBtr0086041|FBtr0086039|FBtr0086040|FBtr0307530|FBtr0300503 5704918|5704918|5704918|5704918|5704918|5704918|5704918|5704918 5705439|5705439|5705439|5705439|5705439|5705439|5705439|5705439 ACATAT 6mer3-8 dme-miR-190-5p 2R + 5704800 5705017 stop_codon vlc FlyBase G10014.1 CGTCGCGAGGCTATGACCGCAGCGGCCAAATTGAATCCCATAAATGTTGATGCCGACCCGGACGTGCCGGGAATAATTGGCGATAGTTGTGCTAATCCTAGCGTTAGCAACGGAAGTTAAATAATGCTCACTGCGAATAGCAACTCATGCTTTCTATTTATACATATATTTTTAACTAACACACGTGTACCCCACAAAGGCATACTTAAATTTATAGA 27 5704985 0.981427546 16 23 169 0.886363636 1.290034611 0.136363636 0.444444444 0.659090909 27 4 1 39 2R:5704800-5705017 6 5 1427 FBgn0259978 569 27.35666667 41.84333333 0.008787346 0.182770805 0.119493348 14 -24 -5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 2R 5705043 5705048 + 2R_5705043_5705048_+ 0.999534759 0.999870082 0.99970242 0.000237093 vlc FBtr0307530|FBtr0300503|FBtr0086039|FBtr0086040|FBtr0307531|FBtr0086041|FBtr0307532|FBtr0300502 5704918|5704918|5704918|5704918|5704918|5704918|5704918|5704918 5705439|5705439|5705439|5705439|5705439|5705439|5705439|5705439 2R + 5705019 5705063 3'utr vlc FlyBase G13103.1 ATTTCTAGTTGAATTAATCATTTACTAGTCCCAACTAAAATTATT 18 5705040 0.702970362 6 18 137 1 1.414973348 0 0.277777778 0.5 18 0 0 26 2R:5705019-5705063 6 vlc FBtr0307532|FBtr0300502|FBtr0307531|FBtr0086041|FBtr0086039|FBtr0086040|FBtr0307530|FBtr0300503 5704918|5704918|5704918|5704918|5704918|5704918|5704918|5704918 5705439|5705439|5705439|5705439|5705439|5705439|5705439|5705439 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 2R + 5705033 5705057 3'utr vlc FlyBase G10015.1 TAATCATTTACTAGTCCCAACTAAA 10 5705040 0.639672593 4 9 53 1 1.113943352 0.076923077 0.3 0.461538462 10 0 0 13 2R:5705033-5705057 6 14 1428 FBgn0259978 569 27.35666667 41.84333333 0.024604569 0.511758255 0.334581375 3 3 3 0.15 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 5705205 5705210 + 2R_5705205_5705210_+ 0.999838542 0.999856829 0.999847686 1.29E-05 vlc FBtr0307530|FBtr0300503|FBtr0086039|FBtr0086040|FBtr0307531|FBtr0086041|FBtr0307532|FBtr0300502 5704918|5704918|5704918|5704918|5704918|5704918|5704918|5704918 5705439|5705439|5705439|5705439|5705439|5705439|5705439|5705439 2R + 5705071 5705236 3'utr vlc FlyBase G13104.1 AGCTCCTCACTGAAATCTGTCACAAGGCGTCAAATATCTAGGAGATAACGAAGTATTGTCACCAATTGCGACTTACCTAAAGTTGTTCATAAATATTGCCTTATCCGCGAAAGATTTCGCTAATTAATCAATTTGCTGTGCACATTATGTAATTGAAAATTAAAAT 144 5705203 0.806513121 24 142 1075 0.983783784 1.782950133 0.108108108 0.215277778 0.389189189 144 1 2 182 2R:5705071-5705236 6 vlc FBtr0307532|FBtr0300502|FBtr0307531|FBtr0086041|FBtr0086039|FBtr0086040|FBtr0307530|FBtr0300503 5704918|5704918|5704918|5704918|5704918|5704918|5704918|5704918 5705439|5705439|5705439|5705439|5705439|5705439|5705439|5705439 GCTGTG 6mer2-7 dme-miR-1008-3p 2R + 5705157 5705254 3'utr vlc FlyBase G10017.1 TCATAAATATTGCCTTATCCGCGAAAGATTTCGCTAATTAATCAATTTGCTGTGCACATTATGTAATTGAAAATTAAAATTACTTGATTACATATAAA 62 5705203 0.987724126 10 56 500 0.896226415 1.500602351 0.066037736 0.435483871 0.669811321 62 9 2 95 2R:5705157-5705254 6 79 1429 FBgn0259978 569 27.35666667 41.84333333 0.13884007 2.887778725 1.887994902 2 2 2 0.15 dme-miR-252-5p 7mer-m8 GTACTTA 2R 5706257 5706263 - 2R_5706257_5706263_- 0.588181244 0.588190265 0.588185754 6.43E-06 ap FBtr0086058|FBtr0086059 5706200|5706200 5707932|5707932 2R - 5706196 5706456 3'utr ap FlyBase G19684.1 TATGTAACTAATATTTATTGCCCAAATTTAATAGTTAGAGACGAATTTAGTTTAGAACAGACTATACAATAAAGTCCATATGTACATGTAGTATTACGGTAAAGTAATAGCTTCGCTCAAGCATACGACCAGGTTCGTAAGCTATTAATACGAAACTGTAATTATAATCAAATCAGTAAACACTGGAAGATTTGTACTTACAAATAGTTAACTCATAAGTCTTACCATAGAAGCTTAAATAAAACGTATTCAAGCAAAAAA 822 5706264 0.770457601 64 783 6073 0.951612903 2.196820744 0.069556452 0.177615572 0.318548387 822 43 5 944 2R:5706196-5706456 7 ap FBtr0086058|FBtr0086059 5706200|5706200 5707932|5707932 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 5706195 5706449 3'utr ap FlyBase G14954.1 CTAATATTTATTGCCCAAATTTAATAGTTAGAGACGAATTTAGTTTAGAACAGACTATACAATAAAGTCCATATGTACATGTAGTATTACGGTAAAGTAATAGCTTCGCTCAAGCATACGACCAGGTTCGTAAGCTATTAATACGAAACTGTAATTATAATCAAATCAGTAAACACTGGAAGATTTGTACTTACAAATAGTTAACTCATAAGTCTTACCATAGAAGCTTAAATAAAACGTATTCAAGCAAAAAAA 615 5706264 0.831704405 58 582 4319 0.950854701 2.04630002 0.071581197 0.356097561 0.576923077 615 39 7 890 2R:5706195-5706449 7 323 1430 FBgn0000099 2 0.113333333 0.183333333 161.5 2850 1761.818182 1 1 1 0.15 dme-miR-2b-2-5p 7mer-A1 TGAAGAA 2R 5706506 5706512 - 2R_5706506_5706512_- 0.823349555 0.823349547 0.823349551 7.07E-08 ap FBtr0086058|FBtr0086059 5706200|5706200 5707932|5707932 2R - 5706490 5706825 3'utr ap FlyBase G19685.2 AGTCTAGTTTACACGTATGTTCTACGAGGAACGGACCGATTGTTCCTATGAGAGCTATAGGTTTTACCATATGTATATGCATGCATTACTTCAGCTCCATCTCTTTTTGATTCATAAACGTATAATGGTTTGAGAGTAAACATTTTGTGGCGTATATAGTTCAAGTTTACATATTTAGAGTACGGTGCCCAAGACGCGCTTTAAAAATATTGAAAACGGGTTGTTAATGAAGTCCCATATGTATAATTGTCTAGGTACATGGATATTGTTAATATATTATTATTTTTATTTAAAGAGCTCTCAACAATATGTATGAAGAAATCTGCGTATATCAAC 1223 5706512 0.882054457 86 1159 8167 0.95379538 1.56880324 0.238283828 0.188216039 0.345214521 1222 32 38 1445 2R:5706490-5706825 7 ap FBtr0086058|FBtr0086059 5706200|5706200 5707932|5707932 TGAAGAA 7mer-A1 dme-miR-2b-2-5p 2R - 5706490 5706820 3'utr ap FlyBase G14955.2 AGTTTACACGTATGTTCTACGAGGAACGGACCGATTGTTCCTATGAGAGCTATAGGTTTTACCATATGTATATGCATGCATTACTTCAGCTCCATCTCTTTTTGATTCATAAACGTATAATGGTTTGAGAGTAAACATTTTGTGGCGTATATAGTTCAAGTTTACATATTTAGAGTACGGTGCCCAAGACGCGCTTTAAAAATATTGAAAACGGGTTGTTAATGAAGTCCCATATGTATAATTGTCTAGGTACATGGATATTGTTAATATATTATTATTTTTATTTAAAGAGCTCTCAACAATATGTATGAAGAAATCTGCGTATATCAAC 816 5706512 0.881105855 68 768 5229 0.941415785 1.586212104 0.260374288 0.378676471 0.587469487 816 43 29 1157 2R:5706490-5706820 7 517.5 1431 FBgn0000099 2 0.113333333 0.183333333 258.75 4566.176471 2822.727273 0 0 0 0.15 dme-miR-79-3p 6mer2-7 AGCTTT 2R 5707062 5707067 - 2R_5707062_5707067_- 0.999962575 0.986461974 0.993212275 0.009546366 ap FBtr0086058|FBtr0086059 5706200|5706200 5707932|5707932 2R - 5706973 5707099 3'utr ap FlyBase G19687.1 ATATGAATTGCCCGCTGGCAATGTTTTTACCAAGCTTTCACCTTCCGATTAGGTTTGGTGGTCATTTAAGTAAATTCCGATTTAAACTTTGTTTTTAATACGGGAGCGTGTCACTTCCTTTCGGTAT 36 5707050 0.872122181 21 35 325 0.977272727 1.633468456 0.136363636 0.166666667 0.318181818 36 1 0 43 2R:5706973-5707099 6 ap FBtr0086058|FBtr0086059 5706200|5706200 5707932|5707932 AGCTTT 6mer2-7 dme-miR-79-3p 2R - 5707023 5707122 3'utr ap FlyBase G14959.1 GCGGCCAGGTCATGCCCTTCCTCATATGAATTGCCCGCTGGCAATGTTTTTACCAAGCTTTCACCTTCCGATTAGGTTTGGTGGTCATTTAAGTAAATTC 18 5707043 0.743443547 13 18 137 1 1.491361694 0.193548387 0.444444444 0.677419355 18 0 0 31 2R:5707023-5707122 6 11.5 1432 FBgn0000099 2 0.113333333 0.183333333 5.75 101.4705882 62.72727273 -17 -24 -20.5 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 2R 5756100 5756105 + 2R_5756100_5756105_+ 0.999944867 0.999999945 0.999972406 3.89E-05 l(2)09851 FBtr0335269 5755985 5756327 2R + 5755967 5756111 stop_codon l(2)09851 FlyBase G13126.1 TTCGCACGATCAGTGTCTGACCTCGCTATTATTCTGTTTCTTAACGTTAAAAAAATTAAACCGATCTTGTGTCTTTGGGTTTTAAGAATTTTTTACTGGACTTATTTAAACACAAAAAGAAAGTGGAACACTATTGACTTTTATG 41 5756107 0.792305763 16 39 366 0.958333333 1.662757832 0.166666667 0.170731707 0.291666667 41 2 0 46 2R:5755967-5756111 6 l(2)09851 FBtr0335269 5755985 5756327 TTGACT 6mer3-8 dme-miR-1012-3p 2R + 5756083 5756111 3'utr l(2)09851 FlyBase G10039.1 AAGAAAGTGGAACACTATTGACTTTTATG 10 5756107 0.561431005 2 10 73 1 1.176091259 0.466666667 0.3 0.533333333 10 0 0 15 2R:5756083-5756111 6 10 1433 FBgn0022288 410.3333333 32.80666667 50.73333333 0.024370431 0.304816094 0.197109067 -7 -7 -7 0.15 dme-miR-14-3p 7mer-m8 AAGACTG 2R 5772217 5772223 + 2R_5772217_5772223_+ 0.671795832 0.671795832 0.671795832 0 Gp210 FBtr0086044|FBtr0335270 5772199|5772199 5772492|5774324 2R + 5772194 5772238 stop_codon Gp210 FlyBase G13157.1 TAGTTAGTTGGATACGTAAATTAAAGACTGTCAGCAAACTGACTC 89 5772224 0.694120598 5 85 438 0.962264151 2.008600172 0.169811321 0.168539326 0.301886792 89 4 0 102 2R:5772194-5772238 7 Gp210 FBtr0335270|FBtr0086044 5772199|5772199 5774324|5772492 AAGACTG 7mer-m8 dme-miR-14-3p 2R + 5772134 5772242 stop_codon Gp210 FlyBase G10060.1 GTATATTTATGGACACCCTCGTTTGAACTCTTCAAACAGATCAGAAAACTCGACTAGCTTTAGTTAGTTGGATACGTAAATTAAAGACTGTCAGCAAACTGACTCGGGT 84 5772215 0.967086338 14 80 436 0.959016393 1.767155866 0.262295082 0.369047619 0.56557377 84 4 1 117 2R:5772134-5772242 7 80.5 1434 FBgn0266580 2948.146667 58.77 90.26 0.02730529 1.369746469 0.891867937 -7 2 -2.5 0.15 dme-miR-980-3p 6mer2-7 GCAGCT 2R 5772292 5772297 + 2R_5772292_5772297_+ 0.999939531 0.999991611 0.999965571 3.68E-05 Gp210 FBtr0086044|FBtr0335270 5772199|5772199 5772492|5774324 2R + 5772256 5772339 3'utr Gp210 FlyBase G13158.1 ATATAAGATAAACTCAGGCATTTGTAATACTTATATGCAGCTTCTGTCCTTTAAAGTAAATTCTTCTCATCCTGACGCCAGAAA 67 5772297 0.914720795 14 65 580 0.974683544 1.58546073 0.075949367 0.164179104 0.291139241 67 1 1 77 2R:5772256-5772339 6 Gp210 FBtr0335270|FBtr0086044 5772199|5772199 5774324|5772492 GCAGCT 6mer2-7 dme-miR-980-3p 2R + 5772260 5772318 3'utr Gp210 FlyBase G10061.1 AAGATAAACTCAGGCATTTGTAATACTTATATGCAGCTTCTGTCCTTTAAAGTAAATTC 45 5772297 0.896308237 9 43 390 0.971014493 1.826074803 0.130434783 0.355555556 0.579710145 45 2 0 67 2R:5772260-5772318 6 49.5 1435 FBgn0266580 2948.146667 58.77 90.26 0.016790209 0.842266462 0.548415688 -5 -5 -5 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2R 5774799 5774805 - 2R_5774799_5774805_- 0.79713418 0.821504384 0.809319282 0.017232334 ZnT41F FBtr0086053|FBtr0086055|FBtr0086056|FBtr0086054 5774774|5774774|5774774|5774774 5774960|5774960|5774960|5774960 2R - 5774788 5774832 3'utr ZnT41F FlyBase G19917.1 TACTGTTAAACATCCAGTGACATTACCCCAAAGAAAATATATTCT 26 5774809 0.779912539 5 25 91 1 1.531478917 0.029411765 0.153846154 0.352941176 26 0 0 34 2R:5774788-5774832 7 ZnT41F FBtr0086056|FBtr0086054|FBtr0086053|FBtr0086055 5774774|5774774|5774774|5774774 5774960|5774960|5774960|5774960 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 5774792 5774825 3'utr ZnT41F FlyBase G15123.1 AAACATCCAGTGACATTACCCCAAAGAAAATATA 12 5774810 0.770891941 5 11 41 0.941176471 1.204119983 0 0.333333333 0.529411765 12 1 0 16 2R:5774792-5774825 7 17.5 1436 FBgn0025693 1109.333333 64.26 98.72666667 0.01577524 0.272331155 0.177257073 4 5 4.5 0.15 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 6011784 6011789 + 2R_6011784_6011789_+ 0.998789334 0.998745955 0.998767645 3.06E-05 Src42A FBtr0335275|FBtr0335276 6011610|6011610 6012500|6012795 2R + 6011767 6011874 3'utr Src42A FlyBase G13169.1 CCGTTTGGTGCCCGTTGGCTGTGGTTGTCTAGGTACCGATACGATTCATGTTATTAGCATTTAAGGTAAATAGTTGCTGAGGTGGAATGCAATTTCAAATGACGTTCC 221 6011782 0.831153906 18 217 1827 0.985663082 1.962211439 0.508960573 0.20361991 0.369175627 221 2 2 275 2R:6011767-6011874 6 Src42A FBtr0335275|FBtr0335276 6011610|6011610 6012500|6012795 GCTGTG 6mer2-7 dme-miR-1008-3p 2R + 6011766 6011808 3'utr Src42A FlyBase G10068.1 CCCGTTTGGTGCCCGTTGGCTGTGGTTGTCTAGGTACCGATAC 145 6011782 0.824277264 7 143 1173 0.991416309 2.36361198 0.467811159 0.420689655 0.639484979 145 2 0 231 2R:6011766-6011808 6 176 1437 FBgn0264959 2196.93 83.74333333 128.84 0.080111792 2.101659834 1.366035393 2 2 2 0.15 dme-miR-965-3p 7mer-m8 TACGCTT 2R 6011934 6011940 + 2R_6011934_6011940_+ 0.618741347 0.614249227 0.616495287 0.003176394 Src42A FBtr0335275|FBtr0335276 6011610|6011610 6012500|6012795 2R + 6011893 6011961 3'utr Src42A FlyBase G13170.1 TTGTTTATTATGACAAACATATTGGCACTTGGTCGGATTTATACGCTTTGACATCCTTGTCGTATATTT 22 6011933 0.98826728 12 21 194 0.96 1.380211242 0.2 0.090909091 0.2 22 1 0 24 2R:6011893-6011961 7 Src42A FBtr0335275|FBtr0335276 6011610|6011610 6012500|6012795 TACGCTT 7mer-m8 dme-miR-965-3p 2R + 6011902 6011956 3'utr Src42A FlyBase G10070.1 ATGACAAACATATTGGCACTTGGTCGGATTTATACGCTTTGACATCCTTGTCGTA 20 6011941 0.679819241 6 18 170 0.944444444 1.531478917 0.083333333 0.5 0.722222222 20 2 0 34 2R:6011902-6011956 7 15.5 1438 FBgn0264959 2196.93 83.74333333 128.84 0.0070553 0.18508936 0.120304253 1 -7 -3 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 6020435 6020441 - 2R_6020435_6020441_- 0.641951703 0.629973108 0.635962406 0.008470149 Strica FBtr0335289 6020309 6021344 2R - 6020362 6020466 3'utr Strica FlyBase G19970.1 TTATCAGGATCACTAGCCGAGTCGATCTAGTCTTTTTAATTGTCTTGCCTTTTTTCATCTATATATGTAAATCTTGAAAAATCGTCCCAGCAATTGTGACCAATA 33 6020434 0.986366973 10 33 289 1 1.602059991 0.05 0.151515152 0.3 33 0 0 40 2R:6020362-6020466 7 Strica FBtr0335289 6020309 6021344 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R - 6020426 6020453 3'utr Strica FlyBase G15165.1 TAGCCGAGTCGATCTAGTCTTTTTAATT 9 6020434 0.635192538 3 7 74 0.818181818 0.954242509 0.090909091 0.222222222 0.363636364 9 2 0 9 2R:6020426-6020453 7 19 1439 FBgn0033051 1511.393333 79.10666667 121.57 0.012571182 0.240182033 0.156288558 -7 -7 -7 0.15 dme-miR-282-5p 7mer-A1 GAGGCTA 2R 6021100 6021106 - 2R_6021100_6021106_- 0.819750122 0.82024895 0.819999536 0.000352705 Strica FBtr0335289|FBtr0086028 6020309|6020866 6021344|6021344 2R - 6021063 6021130 3'utr Strica FlyBase G19973.1 AAACTAAAGAGGCGGTAAAAGTGTGAGGCTAAATATTAAAAAAAAATTAGTCTGGGGTCGGAATTGTT 19 6021107 0.955825423 4 19 93 1 1.380211242 0.208333333 0.263157895 0.416666667 19 0 0 24 2R:6021063-6021130 7 Strica FBtr0335289|FBtr0086028 6020309|6020866 6021344|6021344 GAGGCTA 7mer-A1 dme-miR-282-5p 2R - 6021066 6021122 3'utr Strica FlyBase G15167.1 GAGGCGGTAAAAGTGTGAGGCTAAATATTAAAAAAAAATTAGTCTGGGGTCGGAATT 22 6021107 0.824764868 3 21 94 1 1.51851394 0.242424242 0.380952381 0.606060606 21 0 0 33 2R:6021066-6021122 7 12.5 1440 FBgn0033051 1511.393333 79.10666667 121.57 0.008270514 0.158014495 0.10282142 1 1 1 0.15 dme-miR-965-3p 8mer-A1 TACGCTTA 2R 6026298 6026305 - 2R_6026298_6026305_- 0.625315645 0.625360407 0.625338026 3.17E-05 SCAP FBtr0086027 6026271 6026669 2R - 6026282 6026383 3'utr SCAP FlyBase G19985.1 ACATAGTGTCTTAAAGCGCCTCAGCCTAATATAAAATGACTAAATGTTAAAATAAATACATTATTTATTAGAATCACCTACGCTTAATATTCAGAAAGAATA 54 6026305 0.868138262 9 51 371 0.950819672 1.286306739 0.131147541 0.12962963 0.229508197 54 1 2 58 2R:6026282-6026383 8 SCAP FBtr0086027 6026271 6026669 TACGCTTA 8mer-A1 dme-miR-965-3p 2R - 6026283 6026322 3'utr SCAP FlyBase G15175.1 TATTTATTAGAATCACCTACGCTTAATATTCAGAAAGAAT 18 6026305 0.854438311 3 18 131 1 1.414973348 0.153846154 0.444444444 0.615384615 18 0 0 26 2R:6026283-6026322 8 27.5 1441 FBgn0033052 1236.103333 29.14666667 44.57333333 0.022247331 0.943504117 0.616960814 0 0 0 0.15 dme-miR-283-5p 6mer3-8 TGATAT 2R 6081191 6081196 - 2R_6081191_6081196_- 0.858703474 0.915025836 0.886864655 0.03982588 Ars2 FBtr0086020|FBtr0086021|FBtr0086018 6080826|6081126|6080826 6081333|6081333|6081333 2R - 6081180 6081223 3'utr Ars2 FlyBase G20013.1 ATATAAAGATGGTTTATATACGACTAATGATATCTGTTTTCCTG 40 6081196 0.840562396 2 40 324 1 1.69019608 0.326530612 0.175 0.326530612 40 0 0 49 2R:6081180-6081223 6 Ars2 FBtr0086020|FBtr0086021|FBtr0086018 6080826|6081126|6080826 6081333|6081333|6081333 TGATAT 6mer3-8 dme-miR-283-5p 2R - 6081151 6081224 3'utr Ars2 FlyBase G15189.1 CATATAAAGATGGTTTATATACGACTAATGATATCTGTTTTCCTGTACAATGCTAGAACCTACCTTTATTGCCC 35 6081196 0.987058315 5 33 288 0.946428571 1.423245874 0.410714286 0.371428571 0.607142857 35 2 1 53 2R:6081151-6081224 6 36 1442 FBgn0033062 1878.093333 71.69666667 110.3966667 0.019168376 0.502115394 0.326096802 0 0 0 0.15 dme-miR-305-3p 7mer-A1 TGTGCCA 2R 6082223 6082229 - 2R_6082223_6082229_- 0.442915075 0.555075858 0.498995466 0.079309662 Ars2 FBtr0310666 6080826 6084356 2R - 6082151 6082245 5'utr Ars2 FlyBase G20016.1 AGTTTCTTACTAAGACTGTGCCACTGAGTGACGAAGAGATTAAGAATCTTGGAGCCAAGGACGCCGAAACGGAGGTGGAAAAGTTTGTGCAAGCG 23 6082227 0.971078171 9 20 127 0.884615385 1.06069784 0.153846154 0.130434783 0.230769231 23 2 1 23 2R:6082151-6082245 7 Ars2 FBtr0310666 6080826 6084356 TGTGCCA 7mer-A1 dme-miR-305-3p 2R - 6082189 6082245 5'utr Ars2 FlyBase G15192.1 AGTTTCTTACTAAGACTGTGCCACTGAGTGACGAAGAGATTAAGAATCTTGGAGCCA 10 6082227 0.9801368 4 9 67 0.9375 1.176091259 0.125 0.5 0.6875 10 1 0 15 2R:6082189-6082245 7 11.5 1443 FBgn0033062 1878.093333 71.69666667 110.3966667 0.006123231 0.160397973 0.104169812 -2 -2 -2 0.15 dme-miR-1003-3p 6mer2-7 TGTGAG 2R 6082370 6082375 - 2R_6082370_6082375_- 0.991473061 0.994528404 0.993000732 0.002160423 Ars2 FBtr0310666 6080826 6084356 2R - 6082356 6082403 5'utr Ars2 FlyBase G20017.1 AGTGCACTCAGTAGACTATTACAACCATTGTGAGTATCCATATGAAGA 16 6082376 0.709641842 5 15 104 0.95 0.977723605 0.2 0.1875 0.35 16 0 1 19 2R:6082356-6082403 6 Ars2 FBtr0310666 6080826 6084356 TGTGAG 6mer2-7 dme-miR-1003-3p 2R - 6082352 6082410 5'utr Ars2 FlyBase G15193.1 TGCGTATAGTGCACTCAGTAGACTATTACAACCATTGTGAGTATCCATATGAAGACGAG 15 6082385 0.91753155 7 12 87 0.913043478 1.021189299 0.086956522 0.5 0.695652174 14 1 1 21 2R:6082352-6082410 6 9 1444 FBgn0033062 1878.093333 71.69666667 110.3966667 0.004792094 0.125528848 0.081524201 1 10 5.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 6082803 6082808 - 2R_6082803_6082808_- 0.98563172 0.984261846 0.984946783 0.000968666 Ars2 FBtr0310666|FBtr0310666|FBtr0310666 6080826|6080826|6080826 6084356|6084356|6084356 2R - 6082769 6082841 5'utr Ars2 FlyBase G20019.1 TTGCTGGGGTCTAAACAATCAGCGACTGAGAGACTGTGAAATGGGAGCTATCGTCAATCGGGACCTCAGCCGA 35 6082805 0.78144351 9 34 121 0.956521739 1.643452676 0.173913043 0.228571429 0.413043478 35 2 0 44 2R:6082769-6082841 6 Ars2 FBtr0310666|FBtr0310666|FBtr0310666 6080826|6080826|6080826 6084356|6084356|6084356 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 6082784 6082829 5'utr Ars2 FlyBase G15196.1 AAACAATCAGCGACTGAGAGACTGTGAAATGGGAGCTATCGTCAAT 21 6082804 0.780265715 4 20 66 1 1.579783597 0.368421053 0.55 0.763157895 20 0 0 38 2R:6082784-6082829 6 23 1445 FBgn0033062 1878.093333 71.69666667 110.3966667 0.012246463 0.320795946 0.208339624 -3 -4 -3.5 0.15 dme-bantam-3p 6mer3-8 TGATCT 2R 6083058 6083063 - 2R_6083058_6083063_- 0.944766762 0.956736857 0.950751809 0.008464139 Ars2 FBtr0310666 6080826 6084356 2R - 6083042 6083100 5'utr Ars2 FlyBase G20021.1 CTGTTGGTAAAGACAAGGTTGTCGAAACCGAGACTATTGATCTAGACAAAGTAAAGGAT 43 6083064 0.68885767 3 41 211 0.98 1.69019608 0.24 0.162790698 0.28 43 1 0 49 2R:6083042-6083100 6 Ars2 FBtr0310666 6080826 6084356 TGATCT 6mer3-8 dme-bantam-3p 2R - 6083048 6083111 5'utr Ars2 FlyBase G15197.1 AGAGAAGCCCTCTGTTGGTAAAGACAAGGTTGTCGAAACCGAGACTATTGATCTAGACAAAGTA 31 6083064 0.953905906 3 30 140 1 1.69019608 0.326530612 0.419354839 0.632653061 31 0 0 49 2R:6083048-6083111 6 34.5 1446 FBgn0033062 1878.093333 71.69666667 110.3966667 0.018369694 0.481193919 0.312509436 1 1 1 0.15 dme-miR-92b-3p 8mer-m1 GTGCAATT 2R 6091023 6091030 - 2R_6091023_6091030_- 0.596691364 0.596178053 0.596434708 0.000362958 EcR FBtr0302439|FBtr0086008|FBtr0086010|FBtr0086012 6087871|6090417|6090417|6090417 6092587|6092587|6092587|6092587 2R - 6091010 6091045 3'utr EcR FlyBase G20035.1 CTTTCTACTTGAATTGTGCAATTTTTTACTTTTACT 14 6091032 0.732402923 6 14 147 1 1.230448921 0 0.214285714 0.352941176 14 0 0 17 2R:6091010-6091045 8 EcR FBtr0086012|FBtr0086008|FBtr0086010|FBtr0302439 6090417|6090417|6090417|6087871 6092587|6092587|6092587|6092587 GTGCAATT 8mer-m1 dme-miR-92b-3p 2R - 6090996 6091041 3'utr EcR FlyBase G15202.2 CTACTTGAATTGTGCAATTTTTTACTTTTACTACTAATCCTAATTT 11 6091032 0.928711765 4 8 120 0.875 0.669006781 0.0625 0.363636364 0.5625 11 0 2 14 2R:6090996-6091041 8 10.5 1447 FBgn0000546 917.5266667 23.27333333 35.89 0.011443809 0.451160126 0.292560602 2 2 2 0.15 dme-miR-965-3p 6mer3-8 TACGCT 2R 6092335 6092340 - 2R_6092335_6092340_- 0.866170415 0.840136799 0.853153607 0.018408535 EcR FBtr0302439|FBtr0086009|FBtr0086008|FBtr0086010|FBtr0086011|FBtr0086012 6087871|6091864|6090417|6090417|6092275|6090417 6092587|6092587|6092587|6092587|6092587|6092587 2R - 6092228 6092451 5'utr-coding EcR FlyBase G20041.2 TAAAAAGTGAATAATTAATGGACAAGCGTAAAATGCAGTTATTTAGTCTTAAGCCTGCAAATATTACCTATTATTCATACAAATTAACATATAATACAGCCTATTAACAATTACGCTAAAGCTTAATTGAAAAAGCTTCAACAACAATTGGACAAACGCGTTGAGGAACCGGGAGAAAATTTAAGAAAAAAAAAACCATTGAAAATTATGAAATTTAGTATACA 63 6092341 0.979374601 26 54 375 0.896103896 1.838849091 0.103896104 0.206349206 0.350649351 63 8 0 69 2R:6092228-6092451 6 EcR FBtr0086011|FBtr0086012|FBtr0086008|FBtr0086010|FBtr0302439|FBtr0086009 6092275|6090417|6090417|6090417|6087871|6091864 6092587|6092587|6092587|6092587|6092587|6092587 TACGCT 6mer3-8 dme-miR-965-3p 2R - 6092328 6092441 5'utr EcR FlyBase G15207.1 ATAATTAATGGACAAGCGTAAAATGCAGTTATTTAGTCTTAAGCCTGCAAATATTACCTATTATTCATACAAATTAACATATAATACAGCCTATTAACAATTACGCTAAAGCTT 25 6092341 0.977033311 12 25 182 1 1.591064607 0.051282051 0.44 0.641025641 25 0 0 39 2R:6092328-6092441 6 8.5 1448 FBgn0000546 917.5266667 23.27333333 35.89 0.009264036 0.365224864 0.236834773 1 1 1 0.15 dme-miR-1003-3p 6mer3-8 ATGTGA 2R 6209910 6209915 - 2R_6209910_6209915_- 0.999993018 0.999899737 0.999946377 6.60E-05 l(2)k14710 FBtr0305967|FBtr0086000 6209780|6209780 6210093|6210093 2R - 6209885 6209930 3'utr l(2)k14710 FlyBase G20069.1 GAGCTTGGCTGTATTATGTGAATGAACCATTCTGCTATCTTCCTTA 21 6209908 0.867402234 7 18 156 0.88 1.041392685 0.52 0.19047619 0.32 21 2 1 22 2R:6209885-6209930 6 l(2)k14710 FBtr0086000|FBtr0305967 6209780|6209780 6210093|6210093 ATGTGA 6mer3-8 dme-miR-1003-3p 2R - 6209882 6209930 3'utr l(2)k14710 FlyBase G15222.1 GAGCTTGGCTGTATTATGTGAATGAACCATTCTGCTATCTTCCTTAATC 19 6209925 0.740576723 5 19 158 1 1.361727836 0.217391304 0.210526316 0.347826087 19 0 0 23 2R:6209882-6209930 6 17 1449 FBgn0021847 147.6666667 5.836666667 8.94 0.115124153 2.912621359 1.901565996 -7 10 1.5 0.15 dme-miR-970-3p 7mer-A1 CTTATGA 2R 6239889 6239895 + 2R_6239889_6239895_+ 0.67164378 0.687471957 0.679557869 0.011192228 bin3 FBtr0346718|FBtr0085993 6239761|6239761 6240602|6240602 2R + 6239826 6239921 3'utr bin3 FlyBase G13229.1 CTTAAAAAAAACCCCAAAAAGTTTTCGTAAAGAAAAAATTTAATGCAACCGTAAACGGAGACGCTTATGATTTTCTATGGTATAATGTGCGTATAT 124 6239893 0.965031683 12 118 619 0.947368421 2.158362492 0.118421053 0.153225806 0.309210526 124 8 0 144 2R:6239826-6239921 7 bin3 FBtr0346718|FBtr0085993 6239761|6239761 6240602|6240602 CTTATGA 7mer-A1 dme-miR-970-3p 2R + 6239829 6239913 3'utr bin3 FlyBase G10110.1 AAAAAAAACCCCAAAAAGTTTTCGTAAAGAAAAAATTTAATGCAACCGTAAACGGAGACGCTTATGATTTTCTATGGTATAATGT 95 6239893 0.966798336 10 91 489 0.964285714 1.829303773 0.071428571 0.315789474 0.535714286 95 4 1 135 2R:6239829-6239913 7 71 1450 FBgn0263144 2119.726667 46.07 71.03666667 0.033494885 1.541133058 0.999483835 -4 -4 -4 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 6626425 6626431 - 2R_6626425_6626431_- 0.75804004 0.757856656 0.757948348 0.000129613 Vha16-1 FBtr0086152|FBtr0086152|FBtr0086152|FBtr0086150|FBtr0086150|FBtr0086150|FBtr0086153|FBtr0086153|FBtr0086153|FBtr0086151|FBtr0086151|FBtr0086151 6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240 6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469 2R - 6626359 6626544 3'utr Vha16-1 FlyBase G20121.3 ACACACATACAAAATGTAACTAAGTCCTACGTTTATTTTTAATTATTGTTCAATTCTAAGAATAATATATTAAAAATTAATAATAATAAATTATATATATAATTATGATTTTTTGTGATAAGAACAGATGGTAATGCAAACAATTACGGTATTGATATACATAATATATACAGAATATATATATAT 408 6626433 0.77285983 31 378 3488 0.928131417 1.509010399 0.223819302 0.159313725 0.295687885 408 22 13 452 2R:6626359-6626544 7 Vha16-1 FBtr0086151|FBtr0086151|FBtr0086151|FBtr0086153|FBtr0086153|FBtr0086153|FBtr0086150|FBtr0086150|FBtr0086150|FBtr0086152|FBtr0086152|FBtr0086152 6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240 6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 6626357 6626457 3'utr Vha16-1 FlyBase G15273.1 AAATTATATATATAATTATGATTTTTTGTGATAAGAACAGATGGTAATGCAAACAATTACGGTATTGATATACATAATATATACAGAATATATATATATAT 263 6626433 0.710250446 20 237 2224 0.92 1.423875743 0.245333333 0.30418251 0.512 263 18 12 345 2R:6626357-6626457 7 283 1451 FBgn0262736 36576.97333 1582.373333 2438.476667 0.007737108 0.178845279 0.116056062 2 2 2 0.15 dme-miR-277-3p 6mer3-8 TGCATT 2R 6626860 6626865 - 2R_6626860_6626865_- 0.963938571 0.96636913 0.96515385 0.001718623 Vha16-1 FBtr0086152|FBtr0086150|FBtr0086153|FBtr0086151 6625240|6625240|6625240|6625240 6627469|6627469|6627469|6627469 2R - 6626803 6626934 3'utr Vha16-1 FlyBase G20123.1 CGTTAAACAAAAAGAAAAAATTGTAAAGAAATCAACAACCAACAATTGTCAGAAGAAACTTTGTACATTTGCATTGAGCCTGACGCGGCTGCAACCAATTCAGATCAACAAATTTAGCGAAAGGGCCAAAAC 722 6626860 0.968736552 19 714 4007 0.990453461 2.919078092 0.054892601 0.13434903 0.254176611 722 8 0 830 2R:6626803-6626934 6 Vha16-1 FBtr0086151|FBtr0086153|FBtr0086150|FBtr0086152 6625240|6625240|6625240|6625240 6627469|6627469|6627469|6627469 TGCATT 6mer3-8 dme-miR-277-3p 2R - 6626803 6626984 3'utr Vha16-1 FlyBase G15274.1 TGTTTTTTCCATTATTATTATTAAATAATGTTTAGTGTATATGTAAAGTTCGTTAAACAAAAAGAAAAAATTGTAAAGAAATCAACAACCAACAATTGTCAGAAGAAACTTTGTACATTTGCATTGAGCCTGACGCGGCTGCAACCAATTCAGATCAACAAATTTAGCGAAAGGGCCAAAAC 342 6626860 0.971976736 17 331 1876 0.965073529 2.243038049 0.051470588 0.394736842 0.619485294 342 17 2 525 2R:6626803-6626984 6 505.5 1452 FBgn0262736 36576.97333 1582.373333 2438.476667 0.01382017 0.31945685 0.207301553 -5 -5 -5 0.15 dme-miR-92b-3p 6mer3-8 GTGCAA 2R 6627288 6627293 - 2R_6627288_6627293_- 0.987492892 0.956533564 0.972013228 0.021891531 Vha16-1 FBtr0086152|FBtr0086150|FBtr0086153|FBtr0086151 6625240|6625240|6625240|6625240 6627469|6627469|6627469|6627469 2R - 6627251 6627378 3'utr Vha16-1 FlyBase G20126.1 AGGAGCAGGTAAAATTGTGTCAAGCCAATGAGCAACGTGCAACATGCAACTTCCAACAAGCAAAAACCACAACAGTGCGTGTGCGGTGCAAGCCCGGCGTGGACCGTTTGTACATAGGGAGAACAACC 22 6627292 0.942840953 9 22 90 1 1.397940009 0.16 0.136363636 0.24 22 0 0 25 2R:6627251-6627378 6 Vha16-1 FBtr0086151|FBtr0086153|FBtr0086150|FBtr0086152 6625240|6625240|6625240|6625240 6627469|6627469|6627469|6627469 GTGCAA 6mer3-8 dme-miR-92b-3p 2R - 6627248 6627312 3'utr Vha16-1 FlyBase G15276.1 CCACAACAGTGCGTGTGCGGTGCAAGCCCGGCGTGGACCGTTTGTACATAGGGAGAACAACCAAA 18 6627292 0.945579313 5 17 71 0.888888889 1.380211242 0 0.222222222 0.481481481 18 3 0 24 2R:6627248-6627312 6 14.5 1453 FBgn0262736 36576.97333 1582.373333 2438.476667 0.000396424 0.009163451 0.005946335 -1 -1 -1 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 2R 6642578 6642583 - 2R_6642578_6642583_- 0.999486533 0.99999641 0.999741471 0.000360554 Fmo-2 FBtr0086148 6642416 6642703 2R - 6642543 6642600 3'utr Fmo-2 FlyBase G20143.1 ACGGATTATAACTCAGATGTGTTAATTAATATTTTATAAGAACAATGTAAATCAAAGT 16 6642574 0.98556447 10 15 149 0.944444444 1.230448921 0.277777778 0.125 0.222222222 16 1 0 17 2R:6642543-6642600 6 Fmo-2 FBtr0086148 6642416 6642703 TGTGTT 6mer3-8 dme-miR-317-3p 2R - 6642517 6642599 3'utr Fmo-2 FlyBase G15286.1 CGGATTATAACTCAGATGTGTTAATTAATATTTTATAAGAACAATGTAAATCAAAGTATGTTTTGAACGATTAATTCAAAACG 14 6642575 0.990922515 8 13 135 0.952380952 1.301029996 0.238095238 0.357142857 0.571428571 14 1 0 20 2R:6642517-6642599 6 13 1454 FBgn0033079 393.3166667 28.71 43.87 0.033052248 0.452803901 0.296330066 -9 -8 -8.5 0.15 dme-bantam-3p 6mer3-8 TGATCT 2R 6660081 6660086 + 2R_6660081_6660086_+ 0.473554753 0.803678574 0.638616663 0.233432778 sced FBtr0086110|FBtr0336663 6659979|6659979 6660624|6660326 2R + 6660055 6660098 3'utr sced FlyBase G13327.1 ATTTATGTTGTAGTTTCTTGTGAATGTGATCTGATTAGTTCGAC 48 6660075 0.768618275 9 44 517 0.945454545 1.414973348 0.145454545 0.125 0.236363636 48 2 1 52 2R:6660055-6660098 6 sced FBtr0086110|FBtr0336663 6659979|6659979 6660624|6660326 TGATCT 6mer3-8 dme-bantam-3p 2R + 6660006 6660104 3'utr sced FlyBase G10179.1 ATGTTTAACACTTCGCTGTGGACACAAACTGCTTTTTAACCATTTCGCTATTTATGTTGTAGTTTCTTGTGAATGTGATCTGATTAGTTCGACAAGTTG 42 6660075 0.964592412 12 39 419 0.93442623 1.755874856 0.131147541 0.380952381 0.573770492 42 4 0 57 2R:6660006-6660104 6 42.5 1455 FBgn0013732 116.0133333 4.383333333 6.713333333 0.366337203 9.69581749 6.330685204 6 6 6 0.15 dme-miR-965-3p 7mer-m8 TACGCTT 2R 6660474 6660480 + 2R_6660474_6660480_+ 0.528075011 0.487972499 0.508023755 0.02835675 sced FBtr0086110 6659979 6660624 2R + 6660456 6660505 3'utr sced FlyBase G13330.1 TGGCGGCGTAGCCTGAACTACGCTTTTCGGCTTCGCATAACATATCAGAG 44 6660481 0.955604803 4 42 300 0.97826087 1.352182518 0.347826087 0.022727273 0.065217391 44 0 1 45 2R:6660456-6660505 7 sced FBtr0086110 6659979 6660624 TACGCTT 7mer-m8 dme-miR-965-3p 2R + 6660456 6660495 3'utr sced FlyBase G10181.1 TGGCGGCGTAGCCTGAACTACGCTTTTCGGCTTCGCATAA 21 6660481 0.669762867 3 20 134 1 1.491361694 0.193548387 0.428571429 0.612903226 21 0 0 31 2R:6660456-6660495 7 31.5 1456 FBgn0013732 116.0133333 4.383333333 6.713333333 0.271520515 7.186311787 4.692154916 -7 -7 -7 0.15 dme-miR-2535b-3p 6mer3-8 CCGTGA 2R 6660562 6660567 + 2R_6660562_6660567_+ 0.989173281 0.987478147 0.988325714 0.001198687 sced FBtr0086110 6659979 6660624 2R + 6660534 6660581 3'utr sced FlyBase G13331.1 AAGATAGCATAACCAATGCTGAACTGTACCGTGACTAAACCATAAGCT 16 6660558 0.962489818 5 16 84 1 1.255272505 0.055555556 0.0625 0.166666667 16 0 0 18 2R:6660534-6660581 6 sced FBtr0086110 6659979 6660624 CCGTGA 6mer3-8 dme-miR-2535b-3p 2R + 6660538 6660582 3'utr sced FlyBase G10182.1 TAGCATAACCAATGCTGAACTGTACCGTGACTAAACCATAAGCTT 15 6660558 0.892305244 3 15 78 1 1.301029996 0 0.266666667 0.45 15 0 0 20 2R:6660538-6660582 6 15.5 1457 FBgn0013732 116.0133333 4.383333333 6.713333333 0.133605333 3.536121673 2.308838133 4 4 4 0.15 dme-miR-995-5p 6mer3-8 AATTCG 2R 6667666 6667671 + 2R_6667666_6667671_+ 0.999918062 0.946242336 0.973080199 0.037954522 Adf1 FBtr0086112|FBtr0086113|FBtr0086111|FBtr0330252 6667376|6667376|6667376|6667439 6668085|6668085|6668085|6668085 2R + 6667584 6667734 3'utr Adf1 FlyBase G13339.1 TAACGCGTAATGATACTTCCCCACGCCCATGTAGACAAACATATATATTTATATGCTTAGTTGACCCCATGATCGGTGATTTAATTCGCGCCCAGTTCTCAGCTCTGTACAAAAAATGCGATTGAAAATAGCGATTCTAGAATTATGAGTA 77 6667665 0.898760895 22 72 491 0.966292135 1.633468456 0.08988764 0.116883117 0.235955056 77 2 1 86 2R:6667584-6667734 6 Adf1 FBtr0086112|FBtr0086113|FBtr0086111|FBtr0330252 6667376|6667376|6667376|6667439 6668085|6668085|6668085|6668085 AATTCG 6mer3-8 dme-miR-995-5p 2R + 6667593 6667827 3'utr Adf1 FlyBase G10188.1 ATGATACTTCCCCACGCCCATGTAGACAAACATATATATTTATATGCTTAGTTGACCCCATGATCGGTGATTTAATTCGCGCCCAGTTCTCAGCTCTGTACAAAAAATGCGATTGAAAATAGCGATTCTAGAATTATGAGTAGCTTGTTAAAAGACCGTGGAAACACTTTATATGCAGCGTATTGTAAATTTTGACTACGATTTAGTTGTAATTTGCCATCGGGTCTTAGCTCTA 88 6667664 0.799933807 33 82 665 0.943089431 2.064457989 0.162601626 0.295454545 0.495934959 88 7 0 116 2R:6667593-6667827 6 28 1458 FBgn0000054 324.7166667 22.48333333 34.04 0.08622902 1.245366938 0.822561692 1 2 1.5 0.15 dme-miR-1012-3p 7mer-m8 TTGACTA 2R 6667784 6667790 + 2R_6667784_6667790_+ 0.625374351 0.519204919 0.572289635 0.075073173 Adf1 FBtr0086112|FBtr0086113|FBtr0086111|FBtr0330252 6667376|6667376|6667376|6667439 6668085|6668085|6668085|6668085 2R + 6667739 6667789 3'utr Adf1 FlyBase G13339.2 GTTAAAAGACCGTGGAAACACTTTATATGCAGCGTATTGTAAATTTTGACT 49 6667766 0.756989286 9 41 349 0.883333333 1.423245874 0.366666667 0.142857143 0.3 49 6 1 53 2R:6667739-6667789 6 Adf1 FBtr0086112|FBtr0086113|FBtr0086111|FBtr0330252 6667376|6667376|6667376|6667439 6668085|6668085|6668085|6668085 TTGACTA 7mer-m8 dme-miR-1012-3p 2R + 6667593 6667827 3'utr Adf1 FlyBase G10188.1 ATGATACTTCCCCACGCCCATGTAGACAAACATATATATTTATATGCTTAGTTGACCCCATGATCGGTGATTTAATTCGCGCCCAGTTCTCAGCTCTGTACAAAAAATGCGATTGAAAATAGCGATTCTAGAATTATGAGTAGCTTGTTAAAAGACCGTGGAAACACTTTATATGCAGCGTATTGTAAATTTTGACTACGATTTAGTTGTAATTTGCCATCGGGTCTTAGCTCTA 88 6667766 0.799933807 33 82 665 0.943089431 2.064457989 0.162601626 0.295454545 0.495934959 88 7 0 116 2R:6667593-6667827 7 15 1459 FBgn0000054 324.7166667 22.48333333 34.04 0.046194118 0.66716086 0.440658049 18 18 18 0.15 dme-miR-999-3p 6mer2-7 GTTAAC 2R 6670221 6670226 - 2R_6670221_6670226_- 0.816048696 0.804256541 0.810152619 0.008338345 Hsepi FBtr0086145|FBtr0302190 6670152|6670152 6671031|6671031 2R - 6670188 6670257 3'utr Hsepi FlyBase G20162.1 TGTGTCCCACTACTAATCCCAAAACGAGACTGTTAACGAAAATATTTGATTTTGAATATTATGTTAAGTG 145 6670225 0.686670006 9 139 551 0.964705882 1.913813852 0.035294118 0.137931034 0.264705882 145 5 1 164 2R:6670188-6670257 6 Hsepi FBtr0302190|FBtr0086145 6670152|6670152 6671031|6671031 GTTAAC 6mer2-7 dme-miR-999-3p 2R - 6670161 6670258 3'utr Hsepi FlyBase G15301.1 GTGTGTCCCACTACTAATCCCAAAACGAGACTGTTAACGAAAATATTTGATTTTGAATATTATGTTAAGTGAACCAAATTAAAGTACTTAATTTTTGT 127 6670225 0.932323311 9 127 481 1 2.252853031 0.016759777 0.307086614 0.508379888 127 0 0 179 2R:6670161-6670258 6 131 1460 FBgn0033087 180.49 7.23 11.15666667 0.725801983 18.11894882 11.74185838 -1 -1 -1 0.15 dme-miR-184-5p 7mer-m8 TGATAAG 2R 6670437 6670443 - 2R_6670437_6670443_- 0.658994611 0.658993222 0.658993916 9.90E-07 Hsepi FBtr0086145|FBtr0302190 6670152|6670152 6671031|6671031 2R - 6670396 6670503 3'utr Hsepi FlyBase G20165.1 AGCGCTCCCACTCAATACTAACTGCCCAAATAACGATGCACGATAATAACGACTTATATATGATAAGCCTGTAATGTAATGTATTGTAGTGTATGCCACTCGAGAATA 17 6670458 0.971457255 10 16 99 0.947368421 1.255272505 0.263157895 0.117647059 0.210526316 17 1 0 18 2R:6670396-6670503 7 Hsepi FBtr0302190|FBtr0086145 6670152|6670152 6671031|6671031 TGATAAG 7mer-m8 dme-miR-184-5p 2R - 6670415 6670470 3'utr Hsepi FlyBase G15304.1 CGATGCACGATAATAACGACTTATATATGATAAGCCTGTAATGTAATGTATTGTAG 7 6670457 0.971527834 5 7 40 1 0.954242509 0.222222222 0.142857143 0.333333333 7 0 0 9 2R:6670415-6670470 7 6 1461 FBgn0033087 180.49 7.23 11.15666667 0.033242839 0.829875519 0.53779504 15 14 14.5 0.15 dme-bantam-3p 6mer3-8 TGATCT 2R 6670902 6670907 - 2R_6670902_6670907_- 0.996673547 0.992264758 0.994469153 0.003117422 Hsepi FBtr0086145|FBtr0302190 6670152|6670152 6671031|6671031 2R - 6670891 6670936 3'utr Hsepi FlyBase G20169.2 GCCGTGTCCTTTCCACAACCTCACACTCCTGATCTGGAAATAGTTT 45 6670907 0.75866488 6 40 233 0.910714286 1.008600172 0.035714286 0.222222222 0.375 45 1 4 51 2R:6670891-6670936 6 Hsepi FBtr0302190|FBtr0086145 6670152|6670152 6671031|6671031 TGATCT 6mer3-8 dme-bantam-3p 2R - 6670760 6670940 3'utr Hsepi FlyBase G15307.1 AAACGCCGTGTCCTTTCCACAACCTCACACTCCTGATCTGGAAATAGTTTCGTGTTTCTATTCTGTTATTTCCGCCCACGTATGTGTGCTGAAATCCTTATTAAGCTTGTCTATCTGGGCGCCTAGTGTTAAGCTGTTGTACCTTTACCTTTGATTGCATTATCAGATGTTGGCCTCGTCT 61 6670907 0.987093559 22 55 474 0.91954023 1.124938737 0.068965517 0.344262295 0.540229885 61 2 5 80 2R:6670760-6670940 6 34 1462 FBgn0033087 180.49 7.23 11.15666667 0.188376087 4.702627939 3.047505229 0 0 0 0.15 dme-miR-33-5p 6mer2-7 AATGCA 2R 6695459 6695464 - 2R_6695459_6695464_- 0.999843037 0.999838945 0.999840991 2.90E-06 Mob4 FBtr0086141|FBtr0307075 6695112|6695112 6695593|6695593 2R - 6695451 6695534 3'utr Mob4 FlyBase G20181.1 ATTTACCAATAGCTTGCAAGTTGGGTTGGCTCACCCTGACAGGGAAACGATTCCACGCGGACCCGACTCTAATGCAGATCTTGT 19 6695463 0.979619965 10 16 110 0.821428571 1.361727836 0.357142857 0.368421053 0.571428571 19 5 0 23 2R:6695451-6695534 6 Mob4 FBtr0086141|FBtr0307075 6695112|6695112 6695593|6695593 AATGCA 6mer2-7 dme-miR-33-5p 2R - 6695448 6695534 3'utr Mob4 FlyBase G15315.1 ATTTACCAATAGCTTGCAAGTTGGGTTGGCTCACCCTGACAGGGAAACGATTCCACGCGGACCCGACTCTAATGCAGATCTTGTATG 11 6695464 0.970090156 7 10 59 0.933333333 0.84509804 0.066666667 0.272727273 0.466666667 11 0 1 14 2R:6695448-6695534 6 6 1463 FBgn0259483 539.6566667 46.58333333 71.19333333 0.01111818 0.128801431 0.084277554 -1 0 -0.5 0.15 dme-miR-1012-3p 7mer-A1 TGACTAA 2R 6698613 6698619 + 2R_6698613_6698619_+ 0.82334775 0.822934968 0.823141359 0.000291823 Rab2 FBtr0086124|FBtr0336658 6698543|6698543 6699469|6698844 2R + 6698553 6698641 3'utr Rab2 FlyBase G13358.1 CGCAGATGCCCGATTGCAATTCTGGGATAGGCGCAGCCGCTTCTGTAAAAGCTACTTTAGTGACTAACTAATAGAAGGTAGTTGAAGGA 22 6698609 0.966296488 10 21 142 0.961538462 1.397940009 0.307692308 0.136363636 0.269230769 22 1 0 25 2R:6698553-6698641 7 Rab2 FBtr0086124|FBtr0336658 6698543|6698543 6699469|6698844 TGACTAA 7mer-A1 dme-miR-1012-3p 2R + 6698559 6698638 3'utr Rab2 FlyBase G10197.1 TGCCCGATTGCAATTCTGGGATAGGCGCAGCCGCTTCTGTAAAAGCTACTTTAGTGACTAACTAATAGAAGGTAGTTGAA 18 6698609 0.979494153 5 15 103 0.896551724 1.414973348 0.068965517 0.388888889 0.620689655 18 3 0 26 2R:6698559-6698638 7 11.5 1464 FBgn0014009 1265.866667 136.76 209.3033333 0.009084685 0.084088915 0.05494418 4 4 4 0.15 dme-miR-8-3p 6mer2-7 AGTATT 2R 6699354 6699359 + 2R_6699354_6699359_+ 1 0.950093787 0.975046893 0.035289012 Rab2 FBtr0086124 6698543 6699469 2R + 6699316 6699367 3'utr Rab2 FlyBase G13361.1 AGTGGTAACACGAAATGCTGCGATTCAATGATCAATTTAGTATTTTACGAAG 15 6699344 0.98412494 6 15 122 1 1.230448921 0.058823529 0.133333333 0.235294118 15 0 0 17 2R:6699316-6699367 6 Rab2 FBtr0086124 6698543 6699469 AGTATT 6mer2-7 dme-miR-8-3p 2R + 6699313 6699361 3'utr Rab2 FlyBase G10199.1 ACCAGTGGTAACACGAAATGCTGCGATTCAATGATCAATTTAGTATTTT 6 6699344 0.982868529 3 6 48 1 1.113943352 0.230769231 0.666666667 0.846153846 6 0 0 13 2R:6699313-6699361 6 4.5 1465 FBgn0014009 1265.866667 136.76 209.3033333 0.003554877 0.032904358 0.021499896 10 10 10 0.15 dme-miR-7-5p 6mer3-8 GTCTTC 2R 6700313 6700318 - 2R_6700313_6700318_- 0.999934598 0.999968556 0.999951577 2.40E-05 CG45092 FBtr0344559|FBtr0344560|FBtr0344561 6700219|6700219|6699693 6705333|6705333|6705333 2R - 6700308 6700336 3'utr CG45092 FlyBase G20186.1 CAAACGGGTCCCTCAATTGTCTTCTTTAC 7 6700320 0.758022796 2 7 63 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 2R:6700308-6700336 6 CG45092 FBtr0344561|FBtr0344560|FBtr0344559 6699693|6700219|6700219 6705333|6705333|6705333 GTCTTC 6mer3-8 dme-miR-7-5p 2R - 6700305 6700338 3'utr CG45092 FlyBase G15320.1 TGCAAACGGGTCCCTCAATTGTCTTCTTTACAAA 6 6700320 0.874754292 2 6 52 1 0.954242509 0.444444444 0.5 0.666666667 6 0 0 9 2R:6700305-6700338 6 6.5 1466 FBgn0266525 326.5166667 7.77 11.99666667 0.0199071 0.836550837 0.541817171 2 2 2 0.15 dme-miR-305-5p 7mer-m8 AGTACAA 2R 6745772 6745778 + 2R_6745772_6745778_+ 0.470294975 0.642828371 0.556561673 0.121999537 phtf FBtr0086125 6745737 6746141 2R + 6745733 6745809 stop_codon phtf FlyBase G13370.1 AAGTAACCTATGCAAGGCGCAGACCCATCATATTTTTGTAGTACAACTTTTTAGAAACGCTTTAAGAGAAATCTAAC 18 6745769 0.798229395 7 15 139 0.85 1.230448921 0.05 0.111111111 0.2 18 3 0 17 2R:6745733-6745809 7 phtf FBtr0086125 6745737 6746141 AGTACAA 7mer-m8 dme-miR-305-5p 2R + 6745758 6745787 3'utr phtf FlyBase G10205.1 CATCATATTTTTGTAGTACAACTTTTTAGA 7 6745769 0.678057599 2 5 66 0.8 0.903089987 0 0.285714286 0.5 7 2 0 8 2R:6745758-6745787 7 7 1467 FBgn0028579 314.3333333 11.34333333 17.39 0.022269353 0.617102557 0.40253019 3 3 3 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 6748728 6748735 + 2R_6748728_6748735_+ 0.624215738 0.624666023 0.624440881 0.00031841 CG3267 FBtr0086126 6748653 6748954 2R + 6748663 6748801 3'utr CG3267 FlyBase G13376.1 TGTATGCTGGAGAAATTTAATCGGAGCGCATTTACAGGCATTTAATGCCTTTATTTCGAAACTGTTGCATTTATTAGCGTTAAGGCAATTGTTAACTGTGTAATGTACAACTGATTGTTTATTAGGAACAGGCGTGTGA 667 6748727 0.986861481 29 646 6148 0.967405476 2.393282651 0.159061278 0.134932534 0.247718383 667 23 2 742 2R:6748663-6748801 8 CG3267 FBtr0086126 6748653 6748954 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 6748671 6748795 3'utr CG3267 FlyBase G10209.1 GGAGAAATTTAATCGGAGCGCATTTACAGGCATTTAATGCCTTTATTTCGAAACTGTTGCATTTATTAGCGTTAAGGCAATTGTTAACTGTGTAATGTACAACTGATTGTTTATTAGGAACAGGC 483 6748727 0.795692984 22 465 4393 0.964238411 2.260071388 0.147019868 0.407867495 0.621192053 483 24 3 728 2R:6748671-6748795 8 538 1468 FBgn0042083 366.6133333 20.74 31.70666667 1.46748618 25.94021215 16.96804037 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 6762254 6762260 - 2R_6762254_6762260_- 0.801948167 0.800571882 0.801260025 0.000973191 Epac FBtr0329850|FBtr0329850|FBtr0329850|FBtr0112636|FBtr0112636|FBtr0112636|FBtr0329851|FBtr0329851|FBtr0329851|FBtr0329849|FBtr0329849|FBtr0329849 6761911|6761911|6761911|6761911|6761911|6761911|6761911|6761911|6761911|6759713|6759713|6759713 6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646 2R - 6762230 6762279 3'utr Epac FlyBase G20210.1 AAAACTAAACTTGGACGTGTGTGATACTAAACATTTATAGGAGGCAACAT 46 6762262 0.896325008 7 46 287 1 1.740362689 0.054545455 0.195652174 0.327272727 46 0 0 55 2R:6762230-6762279 7 Epac FBtr0329850|FBtr0329850|FBtr0329850|FBtr0112636|FBtr0112636|FBtr0112636|FBtr0329851|FBtr0329851|FBtr0329851|FBtr0329849|FBtr0329849|FBtr0329849 6761911|6761911|6761911|6761911|6761911|6761911|6761911|6761911|6761911|6759713|6759713|6759713 6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 6762237 6762280 3'utr Epac FlyBase G15337.1 AAAAACTAAACTTGGACGTGTGTGATACTAAACATTTATAGGAG 40 6762262 0.776554013 7 40 258 1 1.880813592 0.052631579 0.575 0.776315789 40 0 0 76 2R:6762237-6762280 7 42 1469 FBgn0085421 11.33333333 0.29 0.44 3.705882353 144.8275862 95.45454545 2 2 2 0.15 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 6762343 6762350 - 2R_6762343_6762350_- 0.605597783 0.605588727 0.605593255 6.43E-06 Epac FBtr0329850|FBtr0112636|FBtr0329851|FBtr0329849 6761911|6761911|6761911|6759713 6762646|6762646|6762646|6762646 2R - 6762307 6762422 3'utr Epac FlyBase G20211.1 AGGAACTATCTCAATCTTCTAATGAACTGAAACCCAAACGCATTTTAATGCAAACGAGAAACTTTTTGCTTTAGTACAAAACGATGGAAAAGATGGAAAACAATTTGAAATTCGGC 43 6762352 0.985434524 12 41 334 0.958333333 1.662757832 0.458333333 0.093023256 0.1875 43 2 0 46 2R:6762307-6762422 8 Epac FBtr0329850|FBtr0112636|FBtr0329851|FBtr0329849 6761911|6761911|6761911|6759713 6762646|6762646|6762646|6762646 AGTACAAA 8mer-A1 dme-miR-305-5p 2R - 6762325 6762422 3'utr Epac FlyBase G15338.1 AGGAACTATCTCAATCTTCTAATGAACTGAAACCCAAACGCATTTTAATGCAAACGAGAAACTTTTTGCTTTAGTACAAAACGATGGAAAAGATGGAA 39 6762352 0.739158666 9 33 270 0.898305085 1.72427587 0.372881356 0.358974359 0.576271186 39 6 0 53 2R:6762325-6762422 8 32.5 1470 FBgn0085421 11.33333333 0.29 0.44 2.867647059 112.0689655 73.86363636 2 2 2 0.15 dme-miR-1007-3p 8mer-A1 TGAGCTTA 2R 6762546 6762553 - 2R_6762546_6762553_- 0.625294095 0.625345606 0.62531985 3.64E-05 Epac FBtr0329850|FBtr0112636|FBtr0329851|FBtr0329849 6761911|6761911|6761911|6759713 6762646|6762646|6762646|6762646 2R - 6762523 6762576 3'utr Epac FlyBase G20213.1 AACCGCAATTAGCTGCACAGTTATGAGCTTAGCCGGGTTGTTGTTGCTTTCCGA 31 6762553 0.82651848 4 31 272 1 1.556302501 0.083333333 0.161290323 0.277777778 31 0 0 36 2R:6762523-6762576 8 Epac FBtr0329850|FBtr0112636|FBtr0329851|FBtr0329849 6761911|6761911|6761911|6759713 6762646|6762646|6762646|6762646 TGAGCTTA 8mer-A1 dme-miR-1007-3p 2R - 6762528 6762575 3'utr Epac FlyBase G15340.1 ACCGCAATTAGCTGCACAGTTATGAGCTTAGCCGGGTTGTTGTTGCTT 27 6762553 0.818818673 4 26 227 0.973684211 1.267171728 0.236842105 0.296296296 0.5 27 0 1 37 2R:6762528-6762575 8 28.5 1471 FBgn0085421 11.33333333 0.29 0.44 2.514705882 98.27586207 64.77272727 0 0 0 0.15 dme-bantam-3p 6mer3-8 TGATCT 2R 6814355 6814360 + 2R_6814355_6814360_+ 0.91569914 0.498695034 0.707197087 0.294866427 koi FBtr0335515|FBtr0335517|FBtr0335516 6814313|6814313|6814313 6814812|6814812|6814812 2R + 6814349 6814473 3'utr koi FlyBase G13408.1 ATTTAGTGATCTGGTTGGGTGCAACGCCCCTTGCACTTAGACAAATATGAGAAACTTTCTTTATGAACAATATGAGTACAAAATAAAGCATTTGATCCGTTTTTTGTCCGTCTGCTTGACCCGCA 49 6814362 0.781396755 20 45 341 0.945454545 1.716003344 0.109090909 0.12244898 0.218181818 49 3 0 52 2R:6814349-6814473 6 koi FBtr0335516|FBtr0335515|FBtr0335517 6814313|6814313|6814313 6814812|6814812|6814812 TGATCT 6mer3-8 dme-bantam-3p 2R + 6814349 6814388 3'utr koi FlyBase G10229.1 ATTTAGTGATCTGGTTGGGTGCAACGCCCCTTGCACTTAG 16 6814361 0.661864172 6 12 121 0.785714286 1.342422681 0.107142857 0.625 0.785714286 16 6 0 22 2R:6814349-6814388 6 16 1472 FBgn0265003 944.7366667 44.58333333 68.22333333 0.016935936 0.358878505 0.234523868 -7 -6 -6.5 0.15 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 6814423 6814430 + 2R_6814423_6814430_+ 0.605653693 0.605650487 0.60565209 2.26E-06 koi FBtr0335515|FBtr0335517|FBtr0335516 6814313|6814313|6814313 6814812|6814812|6814812 2R + 6814349 6814473 3'utr koi FlyBase G13408.1 ATTTAGTGATCTGGTTGGGTGCAACGCCCCTTGCACTTAGACAAATATGAGAAACTTTCTTTATGAACAATATGAGTACAAAATAAAGCATTTGATCCGTTTTTTGTCCGTCTGCTTGACCCGCA 49 6814421 0.781396755 20 45 341 0.945454545 1.716003344 0.109090909 0.12244898 0.218181818 49 3 0 52 2R:6814349-6814473 8 koi FBtr0335516|FBtr0335515|FBtr0335517 6814313|6814313|6814313 6814812|6814812|6814812 AGTACAAA 8mer-A1 dme-miR-305-5p 2R + 6814396 6814437 3'utr koi FlyBase G10230.1 TGAGAAACTTTCTTTATGAACAATATGAGTACAAAATAAAGC 14 6814421 0.698419374 5 12 70 0.769230769 1.301029996 0.192307692 0.571428571 0.769230769 14 6 0 20 2R:6814396-6814437 8 15 1473 FBgn0265003 944.7366667 44.58333333 68.22333333 0.01587744 0.336448598 0.219866126 2 2 2 0.15 dme-miR-1008-3p 7mer-m8 AGCTGTG 2R 6817590 6817596 + 2R_6817590_6817596_+ 0.507331621 0.360982327 0.434156974 0.103484582 koi FBtr0335514|FBtr0335512|FBtr0335513 6817004|6817004|6817004 6818199|6818199|6818199 2R + 6817523 6817599 3'utr koi FlyBase G13417.1 ATGTTTAGAATCAAAGCTTTATGCTGATTGAGACGAGAAGTTGATCATGGCCTGGTCTCCAAGCGGAAGCTGTGTTT 14 6817571 0.883646681 9 12 96 0.888888889 1.204119983 0.444444444 0.285714286 0.444444444 14 2 0 16 2R:6817523-6817599 7 koi FBtr0335513|FBtr0335514|FBtr0335512 6817004|6817004|6817004 6818199|6818199|6818199 AGCTGTG 7mer-m8 dme-miR-1008-3p 2R + 6817528 6817593 3'utr koi FlyBase G10239.1 TAGAATCAAAGCTTTATGCTGATTGAGACGAGAAGTTGATCATGGCCTGGTCTCCAAGCGGAAGCT 8 6817570 0.976158968 4 7 53 1 1.041392685 0.454545455 0.25 0.454545455 8 0 0 11 2R:6817528-6817593 4 2.5 1474 FBgn0265003 944.7366667 44.58333333 68.22333333 0.00264624 0.056074766 0.036644354 19 20 19.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 6818189 6818194 + 2R_6818189_6818194_+ 0.542161515 0.519920398 0.531040957 0.015726833 koi FBtr0335514|FBtr0335514|FBtr0335514|FBtr0335512|FBtr0335512|FBtr0335512|FBtr0335513|FBtr0335513|FBtr0335513 6817004|6817004|6817004|6817004|6817004|6817004|6817004|6817004|6817004 6818199|6818199|6818199|6818199|6818199|6818199|6818199|6818199|6818199 2R + 6818161 6818199 3'utr koi FlyBase G13421.1 TTCACCATTTTTAACAATAAACACATTGCTGTGAAAAAA 79 6818186 0.764177338 3 79 334 1 1.973127854 0.010638298 0.164556962 0.29787234 79 0 0 94 2R:6818161-6818199 6 koi FBtr0335513|FBtr0335513|FBtr0335513|FBtr0335514|FBtr0335514|FBtr0335514|FBtr0335512|FBtr0335512|FBtr0335512 6817004|6817004|6817004|6817004|6817004|6817004|6817004|6817004|6817004 6818199|6818199|6818199|6818199|6818199|6818199|6818199|6818199|6818199 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 6818154 6818199 3'utr koi FlyBase G10243.1 AAGGTTTTTCACCATTTTTAACAATAAACACATTGCTGTGAAAAAA 33 6818186 0.948439318 4 33 149 1 1.716003344 0.076923077 0.424242424 0.634615385 33 0 0 52 2R:6818154-6818199 6 55.5 1475 FBgn0265003 944.7366667 44.58333333 68.22333333 0.058746529 1.244859813 0.813504666 3 3 3 0.15 dme-bantam-3p 6mer3-8 TGATCT 2R 6876228 6876233 - 2R_6876228_6876233_- 0.690914044 0.672668234 0.681791139 0.012901729 Spn42Da FBtr0086201|FBtr0086198|FBtr0086205|FBtr0300336|FBtr0086200|FBtr0086202|FBtr0086199 6876151|6876151|6876151|6876151|6876151|6876151|6876151 6876389|6876389|6876596|6876596|6876596|6876596|6876596 2R - 6876162 6876261 3'utr Spn42Da FlyBase G20243.1 CACAAAATTATAGTCTGTGCGCAATTGATGATCTTATATATACACTTAATATTTTTATACTAACCAAGCATGTAGCCGTAGCCTCAATAAAGTCTAAAAG 262 6876233 0.985890142 17 254 2158 0.965517241 2.011429462 0.520376176 0.187022901 0.332288401 262 9 2 308 2R:6876162-6876261 6 Spn42Da FBtr0300336|FBtr0086205|FBtr0086198|FBtr0086201|FBtr0086199|FBtr0086202|FBtr0086200 6876151|6876151|6876151|6876151|6876151|6876151|6876151 6876596|6876596|6876389|6876389|6876596|6876596|6876596 TGATCT 6mer3-8 dme-bantam-3p 2R - 6876210 6876261 3'utr Spn42Da FlyBase G15364.2 CACAAAATTATAGTCTGTGCGCAATTGATGATCTTATATATACACTTAATAT 211 6876233 0.708994829 14 201 1631 0.962848297 2.191730393 0.551083591 0.379146919 0.594427245 211 11 1 311 2R:6876210-6876261 6 201 1476 FBgn0265137 341.8233333 23.49666667 36.20333333 0.588023053 8.55440488 5.551974956 0 0 0 0.15 dme-miR-980-3p 6mer3-8 GGCAGC 2R 6876405 6876410 - 2R_6876405_6876410_- 0.999100728 0.99914151 0.999121119 2.89E-05 Spn42Da FBtr0086205|FBtr0300336|FBtr0086200|FBtr0086202|FBtr0086199 6876151|6876151|6876151|6876151|6876151 6876596|6876596|6876596|6876596|6876596 2R - 6876339 6876435 3'utr Spn42Da FlyBase G20244.2 CAAGGACTCAACCGCTCTCTTCGCTGGCAGCATAAAGAAACTCTAAATAGGCAAACATACTAACCAATCCACAATGTTACTCGAGGGTCTCGTATTC 70 6876411 0.863574409 12 65 403 0.928571429 1.892094603 0.238095238 0.157142857 0.297619048 70 6 0 78 2R:6876339-6876435 6 Spn42Da FBtr0300336|FBtr0086205|FBtr0086199|FBtr0086202|FBtr0086200 6876151|6876151|6876151|6876151|6876151 6876596|6876596|6876596|6876596|6876596 GGCAGC 6mer3-8 dme-miR-980-3p 2R - 6876332 6876434 3'utr Spn42Da FlyBase G15365.1 AAGGACTCAACCGCTCTCTTCGCTGGCAGCATAAAGAAACTCTAAATAGGCAAACATACTAACCAATCCACAATGTTACTCGAGGGTCTCGTATTCATTTAAC 54 6876411 0.91980082 10 47 306 0.891566265 1.392110465 0.301204819 0.333333333 0.56626506 54 7 2 74 2R:6876332-6876434 6 40 1477 FBgn0265137 341.8233333 23.49666667 36.20333333 0.117019513 1.70236913 1.104870638 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 6972183 6972189 - 2R_6972183_6972189_- 0.787108682 0.693340584 0.740224633 0.066304059 Cyp6u1 FBtr0345011|FBtr0345011|FBtr0345011|FBtr0345802|FBtr0345802|FBtr0345802|FBtr0086185|FBtr0086185|FBtr0086185 6972110|6972110|6972110|6971994|6971994|6971994|6972110|6972110|6972110 6972304|6972304|6972304|6972304|6972304|6972304|6972304|6972304|6972304 2R - 6972168 6972228 3'utr Cyp6u1 FlyBase G20259.1 ATGCACCTTTTTCGTTGATTTTCCTAAGCTGTGGACTTGTGTGATAATGCTGACGATGACT 42 6972191 0.634960819 9 38 366 0.901960784 1.361727836 0.235294118 0.19047619 0.333333333 42 4 1 46 2R:6972168-6972228 7 Cyp6u1 FBtr0086185|FBtr0086185|FBtr0086185|FBtr0345011|FBtr0345011|FBtr0345011|FBtr0345802|FBtr0345802|FBtr0345802 6972110|6972110|6972110|6972110|6972110|6972110|6971994|6971994|6971994 6972304|6972304|6972304|6972304|6972304|6972304|6972304|6972304|6972304 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 6972162 6972215 3'utr Cyp6u1 FlyBase G15377.1 GTTGATTTTCCTAAGCTGTGGACTTGTGTGATAATGCTGACGATGACTTTTATA 12 6972192 0.983267933 7 12 91 1 1.146128036 0.571428571 0.166666667 0.285714286 12 0 0 14 2R:6972162-6972215 7 21 1478 FBgn0033121 218 13.62333333 20.59666667 0.096330275 1.541472963 1.019582457 2 3 2.5 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 2R 6976126 6976131 - 2R_6976126_6976131_- 0.995162964 0.999764029 0.997463497 0.003253398 vimar FBtr0086183|FBtr0086182 6975283|6975283 6976552|6976552 2R - 6976108 6976155 3'utr vimar FlyBase G20267.1 CAAAGCAACGATTCAGATGTAGACTTGACTGTAGTTTGGTAAGAAGAA 40 6976136 0.810725046 6 38 321 0.951219512 1.591064607 0.219512195 0.025 0.048780488 40 2 0 39 2R:6976108-6976155 6 vimar FBtr0086182|FBtr0086183 6975283|6975283 6976552|6976552 TTGACT 6mer3-8 dme-miR-1012-3p 2R - 6976096 6976151 3'utr vimar FlyBase G15384.1 GCAACGATTCAGATGTAGACTTGACTGTAGTTTGGTAAGAAGAAAGTGCAGATTCA 18 6976135 0.989496595 5 15 142 0.8 1.079181246 0.2 0.444444444 0.666666667 18 5 1 24 2R:6976096-6976151 6 29 1479 FBgn0022960 1005.046667 35.31333333 54.35 0.028854382 0.821219558 0.533578657 5 4 4.5 0.15 dme-miR-276a-3p 6mer3-8 AGTTCC 2R 6993913 6993918 + 2R_6993913_6993918_+ 0.595833328 0.961352189 0.778592759 0.258460893 CG30159 FBtr0089760|FBtr0089761|FBtr0301713 6993846|6993846|6993846 6994306|6994306|6994306 2R + 6993902 6993946 3'utr CG30159 FlyBase G13441.1 ACCATTAACTTAGTTCCATGGCCAGCTACTCTCTATATTTTTATT 16 6993920 0.935077403 2 16 129 1 1.230448921 0 0.0625 0.117647059 16 0 0 17 2R:6993902-6993946 6 CG30159 FBtr0301713|FBtr0089761|FBtr0089760 6993846|6993846|6993846 6994306|6994306|6994306 AGTTCC 6mer3-8 dme-miR-276a-3p 2R + 6993786 6993941 stop_codon CG30159 FlyBase G10253.1 ACAACGAACTGAGGCAGCGCTGGTTGCCCAAGGAGAAGCTGCTGCCGGAGCTAGTGCGCTGATTGCGATCTCCCCGTTCCTGCCTCGATGCTATTTACAGGGCTACCTAGCTCGCCACCATTAACTTAGTTCCATGGCCAGCTACTCTCTATATTT 36 6993920 0.982390259 12 33 249 0.909090909 1.698970004 0.218181818 0.444444444 0.636363636 36 5 0 50 2R:6993786-6993941 6 13 1480 FBgn0050159 319.0933333 29.40333333 44.86 0.040740431 0.442126743 0.289790459 -7 -7 -7 0.15 dme-miR-282-5p 6mer3-8 AGAGGC 2R 7017790 7017795 + 2R_7017790_7017795_+ 0.98112342 0.983152133 0.982137776 0.001434508 Tsp42Ee FBtr0336871|FBtr0086180 7017760|7017760 7018362|7018362 2R + 7017741 7017872 stop_codon Tsp42Ee FlyBase G13454.1 AAGCGCCGGAACGCCTACTAAGCAATAGGTGTATCCATCAACTACATCTAGAGGCACACCCACATCCAGTAGCACACACACCTCACATTCTCATTAACTTTTACAGTCGTTGAACGCACATACACAACGGGA 56 7017789 0.968335448 12 50 220 0.909090909 1.146128036 0.051948052 0.25 0.454545455 56 3 4 70 2R:7017741-7017872 6 Tsp42Ee FBtr0086180|FBtr0336871 7017760|7017760 7018362|7018362 AGAGGC 6mer3-8 dme-miR-282-5p 2R + 7017772 7017950 3'utr Tsp42Ee FlyBase G10263.1 TATCCATCAACTACATCTAGAGGCACACCCACATCCAGTAGCACACACACCTCACATTCTCATTAACTTTTACAGTCGTTGAACGCACATACACAACGGGATACACAATAACACCTTGAAATAAGCCATTTAAGTGGATATTTGTCACGGAAAAACAAGAAGAAGCTTAGTTTAAGGCG 58 7017789 0.952836223 14 53 235 0.917525773 1.472268752 0.12371134 0.465517241 0.680412371 58 6 2 89 2R:7017772-7017950 6 32 1481 FBgn0029506 12272.56 1084.96 1657.746667 0.002607443 0.029494175 0.019303311 1 1 1 0.15 dme-miR-999-3p 6mer3-8 AGTTAA 2R 7272832 7272837 - 2R_7272832_7272837_- 0.999999998 0.969069343 0.984534671 0.021871308 Br140 FBtr0345370|FBtr0089021 7272273|7272531 7273271|7273271 2R - 7272789 7272844 3'utr Br140 FlyBase G20296.1 ATGTTTAAGTTAAATAGTTTTAAGCTCTCCTACTGTTAAGCCCGGAATCAACATTA 18 7272833 0.998449804 6 7 158 0.375 0.653212514 0.041666667 0.166666667 0.375 18 14 1 9 2R:7272789-7272844 6 Br140 FBtr0089021|FBtr0345370 7272531|7272273 7273271|7273271 AGTTAA 6mer3-8 dme-miR-999-3p 2R - 7272784 7272835 3'utr Br140 FlyBase G15401.1 TTAAATAGTTTTAAGCTCTCCTACTGTTAAGCCCGGAATCAACATTATAAGC 20 7272826 0.995949793 9 10 174 0.448275862 0.636822098 0.034482759 0.25 0.482758621 20 14 2 13 2R:7272784-7272835 4 13.5 1482 FBgn0033155 560.6533333 12.28666667 18.82333333 0.024079051 1.098752035 0.717194971 -4 -11 -7.5 0.15 dme-miR-12-5p 6mer2-7 ATACTC 2R 7273157 7273162 - 2R_7273157_7273162_- 0.99897916 0.998618002 0.998798581 0.000255407 Br140 FBtr0345370|FBtr0089021 7272273|7272531 7273271|7273271 2R - 7273074 7273308 stop_codon Br140 FlyBase G20299.1 CGACTTGGAGGGCCAAGGACCCGATCCGATCATGTGAAAGCTGATGGCCCGATTGCAACTGTAGGCGCCGCTCGAAAGAATTCAGCCATTTAGTTAGCTCCCCCACAAGGGATCGCCGTATTTTTATATCTCGTTGTTGTTACTTGATACTCGAAGATGACGCAGTTGAAGAAGGCCCTCCATTAGAGTATTTCGTTGGCGAATTTCCAATTTGCACTGCAAGTGTCTTTAATTT 88 7273164 0.98305302 22 84 635 0.963302752 2.021189299 0.412844037 0.215909091 0.366972477 88 4 0 105 2R:7273074-7273308 6 Br140 FBtr0089021|FBtr0345370 7272531|7272273 7273271|7273271 ATACTC 6mer2-7 dme-miR-12-5p 2R - 7273107 7273183 3'utr Br140 FlyBase G15403.1 ATATCTCGTTGTTGTTACTTGATACTCGAAGATGACGCAGTTGAAGAAGGCCCTCCATTAGAGTATTTCGTTGGCGA 58 7273164 0.768418041 8 52 450 0.926829268 1.278753601 0.353658537 0.293103448 0.5 58 3 3 76 2R:7273107-7273183 6 45 1483 FBgn0033155 560.6533333 12.28666667 18.82333333 0.080263502 3.662506782 2.390649903 2 2 2 0.15 dme-bantam-3p 6mer3-8 TGATCT 2R 7319607 7319612 - 2R_7319607_7319612_- 0.999803641 0.999877234 0.999840437 5.20E-05 Dscam1 FBtr0111083|FBtr0111055|FBtr0111050|FBtr0111066|FBtr0111070|FBtr0111077|FBtr0111100|FBtr0111076|FBtr0111060|FBtr0306779|FBtr0089019|FBtr0111078|FBtr0089020|FBtr0111058|FBtr0111052|FBtr0111087|FBtr0306786|FBtr0306780|FBtr0111085|FBtr0111065|FBtr0111099|FBtr0306772|FBtr0111097|FBtr0306774|FBtr0306783|FBtr0111057|FBtr0306771|FBtr0111061|FBtr0089018|FBtr0111102|FBtr0111068|FBtr0306784|FBtr0306777|FBtr0306778|FBtr0111101|FBtr0306787|FBtr0111082|FBtr0111074|FBtr0111098|FBtr0111096|FBtr0306782|FBtr0111073|FBtr0111088|FBtr0334801|FBtr0111064|FBtr0111062|FBtr0111049|FBtr0111072|FBtr0111084|FBtr0111081|FBtr0111089|FBtr0111071|FBtr0306770|FBtr0111092|FBtr0111051|FBtr0306773|FBtr0111069|FBtr0111063|FBtr0306781|FBtr0306776|FBtr0111053|FBtr0111080|FBtr0111059|FBtr0111056|FBtr0111075|FBtr0089016|FBtr0306769|FBtr0306775|FBtr0111067|FBtr0111079|FBtr0306767|FBtr0111094|FBtr0306768|FBtr0306785|FBtr0111054 7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7317922|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552 7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320675|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682 2R - 7319560 7319710 3'utr Dscam1 FlyBase G20310.1 ACGATTTATTAAACCAATTCTGATATAGACCGTTCTGAACATGAGTTATACGCATTTGAAGCTTTAAGAGAACCTGAAATTGTTTATTTCACTTCATTTGATCTATCCTAAGTTATTAGTTCATAAGTTGCTAAATATATGATTTTGATTT 150 7319613 0.991665558 26 144 1585 0.966666667 1.763427994 0.055555556 0.146666667 0.288888889 150 4 2 174 2R:7319560-7319710 6 Dscam1 FBtr0306787|FBtr0111101|FBtr0111074|FBtr0111082|FBtr0111102|FBtr0111063|FBtr0306778|FBtr0111053|FBtr0306777|FBtr0111068|FBtr0306771|FBtr0111057|FBtr0089018|FBtr0111061|FBtr0089016|FBtr0111099|FBtr0111079|FBtr0306783|FBtr0306774|FBtr0111097|FBtr0306780|FBtr0306786|FBtr0111065|FBtr0111085|FBtr0089020|FBtr0306782|FBtr0111078|FBtr0089019|FBtr0111052|FBtr0111058|FBtr0111076|FBtr0111100|FBtr0306779|FBtr0111060|FBtr0111050|FBtr0111055|FBtr0111084|FBtr0111083|FBtr0111077|FBtr0111066|FBtr0111094|FBtr0306767|FBtr0111054|FBtr0306785|FBtr0306768|FBtr0306775|FBtr0306769|FBtr0306772|FBtr0111067|FBtr0111080|FBtr0111075|FBtr0111056|FBtr0111059|FBtr0306781|FBtr0111069|FBtr0306776|FBtr0306784|FBtr0111092|FBtr0306770|FBtr0111071|FBtr0306773|FBtr0111051|FBtr0111081|FBtr0111072|FBtr0111089|FBtr0111070|FBtr0111064|FBtr0334801|FBtr0111088|FBtr0111049|FBtr0111062|FBtr0111096|FBtr0111098|FBtr0111087|FBtr0111073 7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7317922|7319552|7319552|7319552|7319552|7319552|7319552|7319552 7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320675|7320682|7320682|7320682|7320682|7320682|7320682|7320682 TGATCT 6mer3-8 dme-bantam-3p 2R - 7319554 7319697 3'utr Dscam1 FlyBase G15417.1 CCAATTCTGATATAGACCGTTCTGAACATGAGTTATACGCATTTGAAGCTTTAAGAGAACCTGAAATTGTTTATTTCACTTCATTTGATCTATCCTAAGTTATTAGTTCATAAGTTGCTAAATATATGATTTTGATTTTATTTT 86 7319613 0.990918916 18 83 870 0.946564885 2.093421685 0.076335878 0.348837209 0.572519084 86 7 0 124 2R:7319554-7319697 6 91.5 1484 FBgn0033159 794.49 12.18 18.55333333 0.115168221 7.512315271 4.931728351 1 1 1 0.15 dme-miR-79-3p 6mer3-8 TAGCTT 2R 7320640 7320645 - 2R_7320640_7320645_- 0.999902729 0.997114663 0.998508696 0.001971414 Dscam1 FBtr0111083|FBtr0111055|FBtr0111050|FBtr0111066|FBtr0111070|FBtr0111077|FBtr0111100|FBtr0111076|FBtr0111060|FBtr0306779|FBtr0089019|FBtr0111078|FBtr0089020|FBtr0111058|FBtr0111052|FBtr0111087|FBtr0306786|FBtr0306780|FBtr0111085|FBtr0111065|FBtr0111099|FBtr0306772|FBtr0111097|FBtr0306774|FBtr0306783|FBtr0111057|FBtr0306771|FBtr0111061|FBtr0089018|FBtr0111102|FBtr0111068|FBtr0306784|FBtr0306777|FBtr0306778|FBtr0111101|FBtr0306787|FBtr0111082|FBtr0111074|FBtr0111098|FBtr0111096|FBtr0306782|FBtr0111073|FBtr0111088|FBtr0334801|FBtr0111064|FBtr0111062|FBtr0111049|FBtr0111072|FBtr0111084|FBtr0111081|FBtr0111089|FBtr0111071|FBtr0306770|FBtr0111092|FBtr0111051|FBtr0306773|FBtr0111069|FBtr0111063|FBtr0306781|FBtr0306776|FBtr0111053|FBtr0111080|FBtr0111059|FBtr0111056|FBtr0111075|FBtr0089016|FBtr0306769|FBtr0306775|FBtr0111067|FBtr0111079|FBtr0306767|FBtr0111094|FBtr0306768|FBtr0306785|FBtr0111054 7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7317922|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552 7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320675|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682 2R - 7320601 7320707 stop_codon Dscam1 FlyBase G20314.1 AGCCTACGATACTATGGCAGTGTAATTTGTAAGCGCCCTCTGCGGCGGTGGGCGTGGCATTTTAGCTTAGTGTTTTAGGTGCATGAAGTGCGTGGGAGTTGAATGAC 32 7320646 0.815431043 14 30 234 0.914285714 1.505149978 0.228571429 0.09375 0.171428571 32 3 0 32 2R:7320601-7320707 6 Dscam1 FBtr0306787|FBtr0111101|FBtr0111074|FBtr0111082|FBtr0111102|FBtr0111063|FBtr0306778|FBtr0111053|FBtr0306777|FBtr0111068|FBtr0306771|FBtr0111057|FBtr0089018|FBtr0111061|FBtr0089016|FBtr0111099|FBtr0111079|FBtr0306783|FBtr0306774|FBtr0111097|FBtr0306780|FBtr0306786|FBtr0111065|FBtr0111085|FBtr0089020|FBtr0306782|FBtr0111078|FBtr0089019|FBtr0111052|FBtr0111058|FBtr0111076|FBtr0111100|FBtr0306779|FBtr0111060|FBtr0111050|FBtr0111055|FBtr0111084|FBtr0111083|FBtr0111077|FBtr0111066|FBtr0111094|FBtr0306767|FBtr0111054|FBtr0306785|FBtr0306768|FBtr0306775|FBtr0306769|FBtr0306772|FBtr0111067|FBtr0111080|FBtr0111075|FBtr0111056|FBtr0111059|FBtr0306781|FBtr0111069|FBtr0306776|FBtr0306784|FBtr0111092|FBtr0306770|FBtr0111071|FBtr0306773|FBtr0111051|FBtr0111081|FBtr0111072|FBtr0111089|FBtr0111070|FBtr0111064|FBtr0334801|FBtr0111088|FBtr0111049|FBtr0111062|FBtr0111096|FBtr0111098|FBtr0111087|FBtr0111073 7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7317922|7319552|7319552|7319552|7319552|7319552|7319552|7319552 7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320675|7320682|7320682|7320682|7320682|7320682|7320682|7320682 TAGCTT 6mer3-8 dme-miR-79-3p 2R - 7320592 7320708 stop_codon Dscam1 FlyBase G15423.1 CAGCCTACGATACTATGGCAGTGTAATTTGTAAGCGCCCTCTGCGGCGGTGGGCGTGGCATTTTAGCTTAGTGTTTTAGGTGCATGAAGTGCGTGGGAGTTGAATGACACTTAGAGA 24 7320646 0.974802603 12 22 136 1 1.602059991 0.325 0.5 0.7 24 0 0 40 2R:7320592-7320708 6 11 1485 FBgn0033159 794.49 12.18 18.55333333 0.01384536 0.903119869 0.592885375 1 1 1 0.15 dme-miR-7-5p 7mer-m8 GTCTTCC 2R 7382570 7382576 - 2R_7382570_7382576_- 0.705764043 0.705896445 0.705830244 9.36E-05 cos FBtr0089015|FBtr0336916 7382174|7382521 7383196|7383196 2R - 7382528 7382609 3'utr cos FlyBase G20350.1 TGTTAGTTTTAGCTTAGTTGTAAACACTATTGTGTCTTCCCTCGAATTTTAATTGACCTTCGATACCAATTACAACATACGT 35 7382578 0.847022236 10 35 328 1 1.633468456 0.162790698 0.171428571 0.325581395 35 0 0 43 2R:7382528-7382609 7 cos FBtr0089015|FBtr0336916 7382174|7382521 7383196|7383196 GTCTTCC 7mer-m8 dme-miR-7-5p 2R - 7382547 7382600 3'utr cos FlyBase G15442.1 TAGCTTAGTTGTAAACACTATTGTGTCTTCCCTCGAATTTTAATTGACCTTCGA 22 7382577 0.699560207 5 18 214 0.827586207 1.380211242 0.103448276 0.318181818 0.482758621 22 5 0 24 2R:7382547-7382600 7 25 1486 FBgn0000352 545 14.08 21.54666667 0.04587156 1.775568182 1.160272277 2 1 1.5 0.15 dme-miR-1002-5p 8mer-A1 CTACTTAA 2R 7382727 7382734 - 2R_7382727_7382734_- 0.590913116 0.617752723 0.60433292 0.018978463 cos FBtr0089015|FBtr0336916 7382174|7382521 7383196|7383196 2R - 7382689 7382781 3'utr cos FlyBase G20351.1 ATGAAAGTAACTATCCTCATGAGATTCAACCGTAAAGACTTGACCTGCTACTTAAGATACTCGCAAGACAAACCGTACACAAAACTCGCTCAA 32 7382762 0.971748242 13 31 181 0.972972973 1.255272505 0.081081081 0.09375 0.216216216 32 0 1 36 2R:7382689-7382781 8 cos FBtr0089015|FBtr0336916 7382174|7382521 7383196|7383196 CTACTTAA 8mer-A1 dme-miR-1002-5p 2R - 7382712 7382778 3'utr cos FlyBase G15444.1 AAAGTAACTATCCTCATGAGATTCAACCGTAAAGACTTGACCTGCTACTTAAGATACTCGCAAGACA 23 7382737 0.749251079 11 21 129 0.891891892 1.51851394 0.216216216 0.52173913 0.702702703 23 4 0 33 2R:7382712-7382778 8 15 1487 FBgn0000352 545 14.08 21.54666667 0.027522936 1.065340909 0.696163366 28 3 15.5 0.15 dme-miR-1006-3p 6mer2-7 GAATTT 2R 7390869 7390874 + 2R_7390869_7390874_+ 0.650586242 0.67683098 0.663708611 0.018557876 CG11107 FBtr0336909|FBtr0088966 7390806|7390806 7391023|7391023 2R + 7390833 7390878 3'utr CG11107 FlyBase G13505.1 AATATGATGGAGAATGGATCATGGATAAGAGTGTGTGAATTTTAGC 5 7390874 0.971595986 3 5 30 1 0.698970004 0.2 0 0 5 0 0 5 2R:7390833-7390878 6 CG11107 FBtr0088966|FBtr0336909 7390806|7390806 7391023|7391023 GAATTT 6mer2-7 dme-miR-1006-3p 2R + 7390833 7390881 3'utr CG11107 FlyBase G10296.1 AATATGATGGAGAATGGATCATGGATAAGAGTGTGTGAATTTTAGCAAG 6 7390872 0.979997698 4 5 39 0.875 0.84509804 0.625 0.333333333 0.5 6 1 0 7 2R:7390833-7390881 6 4 1488 FBgn0033160 905.0066667 41.44666667 63.35 0.004419857 0.096509571 0.063141279 -5 -3 -4 0.15 dme-miR-1012-3p 8mer-A1 TTGACTAA 2R 7398357 7398364 - 2R_7398357_7398364_- 0.615742902 0.586172506 0.600957704 0.02090943 Eaf FBtr0089009|FBtr0089006|FBtr0089008|FBtr0089007 7398224|7398224|7398224|7396848 7398395|7398395|7398395|7398395 2R - 7398347 7398493 stop_codon Eaf FlyBase G20380.1 AGTCCGGCATTTATGCGTCCAATGGTGGCTTTCCAAACGATTTCCTACAAAACGATCTGCAGTTGTCGTCAAATTCGTCCGACGATGACGACGACTAGCTGTTTAAAGTTTGATCTTATTTGCCTTCTTTTGACTAAACCAACGACA 102 7398375 0.855002773 23 100 868 0.98245614 1.748188027 0.166666667 0.107843137 0.201754386 102 1 1 112 2R:7398347-7398493 8 Eaf FBtr0089008|FBtr0089007|FBtr0089009|FBtr0089006 7398224|7396848|7398224|7398224 7398395|7398395|7398395|7398395 TTGACTAA 8mer-A1 dme-miR-1012-3p 2R - 7398306 7398421 stop_codon Eaf FlyBase G15459.1 ATTCGTCCGACGATGACGACGACTAGCTGTTTAAAGTTTGATCTTATTTGCCTTCTTTTGACTAAACCAACGACAACAAGAGCAACAACAATTATTGATATTTTGTCTATATGCGT 66 7398383 0.97971807 13 64 588 0.978723404 1.963787827 0.234042553 0.333333333 0.531914894 66 2 0 92 2R:7398306-7398421 8 19 1489 FBgn0033166 365.6833333 12.62666667 19.28666667 0.051957522 1.504751848 0.985136536 11 19 15 0.15 dme-miR-252-5p 7mer-m8 GTACTTA 2R 7444798 7444804 - 2R_7444798_7444804_- 0.587128514 0.587089924 0.587109219 2.73E-05 kappaB-Ras FBtr0299801|FBtr0089002 7443822|7443822 7445025|7445025 2R - 7444781 7444879 5'utr kappaB-Ras FlyBase G20390.1 GTATTGATCCATTTAGAGTCTACTTGCCTTGTATTAACTGTTGTGCTTTAATGTGGGCCAGAGCCCAAGCCACTTGTACTTATGTCTCTTTGTGTGTGT 20 7444805 0.855629075 10 19 185 1 1.342422681 0.227272727 0.05 0.136363636 20 0 0 22 2R:7444781-7444879 7 kappaB-Ras FBtr0089002|FBtr0299801 7443822|7443822 7445025|7445025 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 7444792 7444845 5'utr kappaB-Ras FlyBase G15466.1 TAACTGTTGTGCTTTAATGTGGGCCAGAGCCCAAGCCACTTGTACTTATGTCTC 6 7444805 0.976794131 2 6 44 1 0.954242509 0.111111111 0.333333333 0.555555556 6 0 0 9 2R:7444792-7444845 7 6.5 1490 FBgn0040513 68.97 4.683333333 7.146666667 0.094243874 1.387900356 0.909514925 1 1 1 0.15 dme-miR-2535b-3p 6mer3-8 CCGTGA 2R 7460541 7460546 - 2R_7460541_7460546_- 0.78931217 0.876194588 0.832753379 0.061435134 CG11141 FBtr0088999|FBtr0345799|FBtr0088998 7460429|7459683|7460429 7460659|7460659|7460659 2R - 7460514 7460603 3'utr CG11141 FlyBase G20411.2 ATTCTCTTTCTATGTTTCTATGTTTGCAAAAGTGTTGTGTTTATCAGATTGTGATCACCGTGATTTAGTTACTCTTTTTAGTGGAATTTA 664 7460539 0.949720983 25 649 5628 0.978391357 1.869764924 0.543817527 0.219879518 0.378151261 664 8 10 815 2R:7460514-7460603 6 CG11141 FBtr0088998|FBtr0345799|FBtr0088999 7460429|7459683|7460429 7460659|7460659|7460659 CCGTGA 6mer3-8 dme-miR-2535b-3p 2R - 7460516 7460717 stop_codon CG11141 FlyBase G15485.1 AACGCCAGCCACCAGTGACTCAAACACCTCCAGCGAGTGGGAGTTTTTGGACAACTAGTTCAGTATTAGAATTAAGTGCATACTCATTCGATTCCATTTGCATTTTTGCACTTTATTCTCTTTCTATGTTTCTATGTTTGCAAAAGTGTTGTGTTTATCAGATTGTGATCACCGTGATTTAGTTACTCTTTTTAGTGGAATT 712 7460539 0.98422822 37 693 5788 0.977653631 2.544068044 0.474860335 0.373595506 0.584729981 712 22 2 1050 2R:7460516-7460717 6 543 1491 FBgn0033177 665.0033333 30.53 46.47333333 0.81653726 17.78578447 11.68411993 -7 -7 -7 0.15 dme-miR-13b-2-5p 7mer-A1 TTGACGA 2R 7478960 7478966 - 2R_7478960_7478966_- 0.782911756 0.782910509 0.782911133 9.19E-07 wech FBtr0300082 7478851 7483393 2R - 7478955 7478985 3'utr wech FlyBase G20448.1 AGCGTACATAGGTGTGGACTTGACGAGACAA 6 7478969 0.853788871 4 5 27 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2R:7478955-7478985 7 wech FBtr0300082 7478851 7483393 TTGACGA 7mer-A1 dme-miR-13b-2-5p 2R - 7478951 7479020 3'utr wech FlyBase G15509.1 TTATATACCCGAATATATATATATATATATATACAAGCGTACATAGGTGTGGACTTGACGAGACAAGAGT 9 7478971 0.971651016 5 9 57 1 1.079181246 0.083333333 0.222222222 0.416666667 9 0 0 12 2R:7478951-7479020 7 5.5 1492 FBgn0259745 2441.89 39.74 61.13333333 0.002252354 0.138399597 0.089967285 3 5 4 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 7479181 7479186 - 2R_7479181_7479186_- 0.952138438 0.98389475 0.968016594 0.022455095 wech FBtr0300082 7478851 7483393 2R - 7479107 7479215 3'utr wech FlyBase G20449.1 AAGGCGATAAATCGAAGTCTAGGAAATCTACCAAATCAAGCGACGGATTCAATAACGAGTTGCAGTTTAAAATTGTAATTGTGTAGTAGTGGAAAGCGAGGAGGAGGTC 28 7479187 0.939193217 6 26 106 0.911764706 1.491361694 0.088235294 0.178571429 0.323529412 28 3 0 31 2R:7479107-7479215 6 wech FBtr0300082 7478851 7483393 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 7479147 7479201 3'utr wech FlyBase G15510.1 AAGTCTAGGAAATCTACCAAATCAAGCGACGGATTCAATAACGAGTTGCAGTTTA 21 7479187 0.928356051 4 18 67 0.9375 1.477121255 0.03125 0.476190476 0.65625 21 2 0 30 2R:7479147-7479201 6 20.5 1493 FBgn0259745 2441.89 39.74 61.13333333 0.008395137 0.515853045 0.335332606 1 1 1 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 7479460 7479465 - 2R_7479460_7479465_- 0.889771433 0.980259598 0.935015516 0.06398482 wech FBtr0300082 7478851 7483393 2R - 7479433 7479503 3'utr wech FlyBase G20451.2 ATATATATCTAGGGCAAATGATTACCAAATTACAAATTACCAAAATCCCTCCTAGCCCGCTAATCTAAATC 37 7479451 0.868507629 9 32 182 0.880952381 0.86923172 0 0.081081081 0.19047619 37 1 4 37 2R:7479433-7479503 6 wech FBtr0300082 7478851 7483393 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 7479436 7479500 3'utr wech FlyBase G15511.2 TATATCTAGGGCAAATGATTACCAAATTACAAATTACCAAAATCCCTCCTAGCCCGCTAATCTAA 27 7479451 0.750409282 8 26 126 0.953488372 1.135662602 0 0.481481481 0.674418605 27 0 2 41 2R:7479436-7479500 6 21 1494 FBgn0259745 2441.89 39.74 61.13333333 0.008599896 0.528434826 0.34351145 -14 -14 -14 0.15 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 7479805 7479812 - 2R_7479805_7479812_- 0.605164208 0.605322168 0.605243188 0.000111723 wech FBtr0300082 7478851 7483393 2R - 7479677 7479854 3'utr wech FlyBase G20454.1 AAATACACGTACATAACATATGTAATAATTATGGAGCAATTGAGTACAAAACGAGTACAAATTTAAATTATAAGCCAGATCGGAGGACACACACGGACACACACCGCTTAAGTTAAACCATACACGGAGCAGTTGAAATATTGATAGGCCAGCTACTGGTTTCGCATAGCAAGTACAG 87 7479815 0.946764696 16 76 320 0.821428571 1.185636577 0.151785714 0.206896552 0.383928571 87 15 5 92 2R:7479677-7479854 8 wech FBtr0300082 7478851 7483393 AGTACAAA 8mer-A1 dme-miR-305-5p 2R - 7479668 7479830 3'utr wech FlyBase G15514.1 ATAATTATGGAGCAATTGAGTACAAAACGAGTACAAATTTAAATTATAAGCCAGATCGGAGGACACACACGGACACACACCGCTTAAGTTAAACCATACACGGAGCAGTTGAAATATTGATAGGCCAGCTACTGGTTTCGCATAGCAAGTACAGCATGTACTC 62 7479815 0.955929955 14 54 250 0.87755102 1.457377197 0.306122449 0.403225806 0.62244898 62 10 2 86 2R:7479668-7479830 8 56.5 1495 FBgn0259745 2441.89 39.74 61.13333333 0.023137815 1.421741319 0.924209378 3 3 3 0.15 dme-miR-970-3p 6mer3-8 TCTTAT 2R 7480160 7480165 - 2R_7480160_7480165_- 0.999999599 0.999999985 0.999999792 2.83E-07 wech FBtr0300083|FBtr0300082 7480093|7478851 7483393|7483393 2R - 7480141 7480200 5'utr wech FlyBase G20456.1 AATCGATCGACGATGCTAAAGCAAACGGAATGAACTCTTATCAAAATACAATTTTGAGTA 63 7480163 0.775571462 6 62 314 0.985714286 1.838849091 0.057142857 0.111111111 0.2 63 1 0 69 2R:7480141-7480200 6 wech FBtr0300082|FBtr0300083 7478851|7480093 7483393|7483393 TCTTAT 6mer3-8 dme-miR-970-3p 2R - 7480139 7480196 5'utr wech FlyBase G15516.1 GATCGACGATGCTAAAGCAAACGGAATGAACTCTTATCAAAATACAATTTTGAGTAAT 43 7480164 0.951826613 5 41 195 0.963636364 1.72427587 0.2 0.23255814 0.4 43 2 0 53 2R:7480139-7480196 6 50 1496 FBgn0259745 2441.89 39.74 61.13333333 0.020475943 1.258178158 0.817884406 -2 -1 -1.5 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 2R 7480674 7480679 - 2R_7480674_7480679_- 0.999226336 0.999460324 0.99934333 0.000165463 wech FBtr0300083|FBtr0300082 7480093|7478851 7483393|7483393 2R - 7480671 7480727 5'utr wech FlyBase G20459.1 GTTAGACACAACCAATTACTACAAGTCATGAGGATACTGAACAATTTGCCAAAGGCT 7 7480682 0.946327776 5 7 32 1 1.041392685 0.363636364 0.285714286 0.545454545 7 0 0 11 2R:7480671-7480727 6 wech FBtr0300082|FBtr0300083 7478851|7480093 7483393|7483393 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 7480658 7480692 5'utr wech FlyBase G15518.1 ACTGAACAATTTGCCAAAGGCTAAGAATCAAAAGG 8 7480681 0.932466938 2 7 29 1 1.079181246 0.083333333 0.375 0.583333333 8 0 0 12 2R:7480658-7480692 6 5 1497 FBgn0259745 2441.89 39.74 61.13333333 0.002047594 0.125817816 0.081788441 3 2 2.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2R 7481165 7481170 - 2R_7481165_7481170_- 0.99520807 0.999956274 0.997582172 0.003357484 wech FBtr0300083|FBtr0300083|FBtr0300083|FBtr0300082|FBtr0300082|FBtr0300082 7480093|7480093|7480093|7478851|7478851|7478851 7483393|7483393|7483393|7483393|7483393|7483393 2R - 7481155 7481209 5'utr wech FlyBase G20462.1 TTTTATCCAATCGTACACCTTGAAGCGCCGTTCATTTCTTGTGATCCAGATCGAA 22 7481172 0.75689083 7 17 169 0.791666667 1.278753601 0.041666667 0.090909091 0.166666667 22 5 0 19 2R:7481155-7481209 6 wech FBtr0300082|FBtr0300082|FBtr0300082|FBtr0300083|FBtr0300083|FBtr0300083 7478851|7478851|7478851|7480093|7480093|7480093 7483393|7483393|7483393|7483393|7483393|7483393 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 7481149 7481205 5'utr wech FlyBase G15520.1 ATCCAATCGTACACCTTGAAGCGCCGTTCATTTCTTGTGATCCAGATCGAATCATTC 9 7481173 0.991900533 5 8 81 0.916666667 0.740362689 0.416666667 0.333333333 0.5 9 0 1 11 2R:7481149-7481205 6 7.5 1498 FBgn0259745 2441.89 39.74 61.13333333 0.003071391 0.188726724 0.122682661 2 3 2.5 0.15 dme-miR-317-3p 8mer-A1 TGTGTTCA 2R 7481615 7481622 - 2R_7481615_7481622_- 0.630035236 0.630109426 0.630072331 5.25E-05 wech FBtr0300083|FBtr0300082 7480093|7478851 7483393|7483393 2R - 7481576 7481640 5'utr wech FlyBase G20464.2 CGTTCTATTCTTTGTCCTTGTGTTCAAACCCGACTTCAACGGATCGACGGAGATGATGATACATA 48 7481623 0.895786489 5 45 423 0.948275862 1.439332694 0.103448276 0.104166667 0.25862069 48 2 1 55 2R:7481576-7481640 8 wech FBtr0300082|FBtr0300083 7478851|7480093 7483393|7483393 TGTGTTCA 8mer-A1 dme-miR-317-3p 2R - 7481602 7481634 5'utr wech FlyBase G15522.2 ATTCTTTGTCCTTGTGTTCAAACCCGACTTCAA 26 7481623 0.713993729 3 25 210 0.971428571 1.531478917 0.028571429 0.192307692 0.4 26 1 0 34 2R:7481602-7481634 8 33.5 1499 FBgn0259745 2441.89 39.74 61.13333333 0.013718882 0.842979366 0.547982552 1 1 1 0.15 dme-miR-276a-3p 6mer2-7 GTTCCT 2R 7481907 7481912 - 2R_7481907_7481912_- 0.942466001 0.985165266 0.963815633 0.030192965 wech FBtr0300084|FBtr0300083|FBtr0300080|FBtr0300082 7481874|7480093|7481874|7478851 7483393|7483393|7483393|7483393 2R - 7481891 7481934 3'utr wech FlyBase G20466.1 TGAATACACATTTAGGTGACATGTTCCTCGCAAAAGAAACAAAT 14 7481913 0.974524855 6 14 84 1 1.230448921 0.058823529 0.214285714 0.352941176 14 0 0 17 2R:7481891-7481934 6 wech FBtr0300082|FBtr0300084|FBtr0300083|FBtr0300080 7478851|7481874|7480093|7481874 7483393|7483393|7483393|7483393 GTTCCT 6mer2-7 dme-miR-276a-3p 2R - 7481895 7481944 3'utr wech FlyBase G15525.1 AAGGGCGTATTGAATACACATTTAGGTGACATGTTCCTCGCAAAAGAAAC 15 7481911 0.971674006 6 12 71 0.869565217 0.823908741 0.260869565 0.4 0.608695652 15 1 2 20 2R:7481895-7481944 6 12.5 1500 FBgn0259745 2441.89 39.74 61.13333333 0.005118986 0.31454454 0.204471101 1 -1 0 0.15 dme-miR-14-3p 8mer-A1 AAGACTGA 2R 7482500 7482507 - 2R_7482500_7482507_- 0.643565465 0.643565469 0.643565467 0 wech FBtr0300084|FBtr0300083|FBtr0300080|FBtr0300082 7481874|7480093|7481874|7478851 7483393|7483393|7483393|7483393 2R - 7482445 7482554 3'utr wech FlyBase G20470.1 AAGAAAATATTGATGGAACCCGCTGACTTTTCGTTGAACTTTATACAAAGACTGATTAACTAAACCGCAATTTCGGAGCCAACTAAAGAACCATATATGGTGAGGCCAAA 241 7482499 0.829855746 19 219 1605 0.902356902 1.826074803 0.215488215 0.174273859 0.32996633 241 26 3 268 2R:7482445-7482554 8 wech FBtr0300082|FBtr0300084|FBtr0300083|FBtr0300080 7478851|7481874|7480093|7481874 7483393|7483393|7483393|7483393 AAGACTGA 8mer-A1 dme-miR-14-3p 2R - 7482280 7482554 3'utr wech FlyBase G15529.1 AAGAAAATATTGATGGAACCCGCTGACTTTTCGTTGAACTTTATACAAAGACTGATTAACTAAACCGCAATTTCGGAGCCAACTAAAGAACCATATATGGTGAGGCCAAAATAAGTGAAAGAGCAACACACTCAAATTGCAATGACATTGATAACGTAAAGTAACTTAACATAGCTTAACATACATACTTTCGCGCATATAGAGCGATACAGATATCATATAGATCCGATCATCCAGTCACGAATCATCATGGGCATAGCTGAAACCGAGTTTAA 229 7482499 0.978696172 34 217 1466 0.946629213 2.226599905 0.306179775 0.366812227 0.592696629 229 18 1 337 2R:7482280-7482554 8 165.5 1501 FBgn0259745 2441.89 39.74 61.13333333 0.067775371 4.164569703 2.707197383 -8 -8 -8 0.15 dme-miR-14-3p 7mer-A1 AGACTGA 2R 7482624 7482630 - 2R_7482624_7482630_- 0.823203941 0.823239256 0.823221599 2.50E-05 wech FBtr0300084|FBtr0300083|FBtr0300080|FBtr0300082 7481874|7480093|7481874|7478851 7483393|7483393|7483393|7483393 2R - 7482588 7482672 3'utr wech FlyBase G20471.1 TTTGGGACATACATATGTATTTTAATGATTTCCTTATAATTGAGACTGAGCATTTGACAACACGAACTTTGCGTGTACGGAAGCA 374 7482632 0.814231969 12 366 2667 0.980477223 2.354108439 0.106290672 0.200534759 0.351409978 374 8 1 452 2R:7482588-7482672 7 wech FBtr0300082|FBtr0300084|FBtr0300083|FBtr0300080 7478851|7481874|7480093|7481874 7483393|7483393|7483393|7483393 AGACTGA 7mer-A1 dme-miR-14-3p 2R - 7482582 7482652 3'utr wech FlyBase G15530.1 TTTAATGATTTCCTTATAATTGAGACTGAGCATTTGACAACACGAACTTTGCGTGTACGGAAGCAAAGCGA 270 7482632 0.977139938 16 257 1794 0.956632653 2.273001272 0.091836735 0.344444444 0.548469388 270 16 1 375 2R:7482582-7482652 7 308 1502 FBgn0259745 2441.89 39.74 61.13333333 0.126131808 7.750377453 5.038167939 2 2 2 0.15 dme-miR-14-3p 7mer-A1 AGACTGA 2R 7482892 7482898 - 2R_7482892_7482898_- 0.801635421 0.808665215 0.805150318 0.004970819 wech FBtr0300084|FBtr0300083|FBtr0300080|FBtr0300082 7481874|7480093|7481874|7478851 7483393|7483393|7483393|7483393 2R - 7482830 7483090 3'utr wech FlyBase G20473.1 AACTAGAACTATAACTAAAACAAAAACAAAAAACAAAAACTAAAGCGAAAGGCAGGCGGTTGAGTAGGATTTAGGAGATATATATAAACGTAGGGTCCGTGAGCATTCAGTAGAGTTACCGAACCTAGTAAAAGATAATGCAAAGAGGGAACTCAACCATTTACTAGATGAAAATATTATTACCTGTTAGTTAGACTGAAAGGCAGTTTGCTAGCTGATAGAAGGAGGTACGAACCAGGTCAGGTGGCGATTGTGTTTTTT 261 7482900 0.977157368 33 247 1617 0.952830189 1.782472624 0.116352201 0.195402299 0.339622642 261 11 4 303 2R:7482830-7483090 7 wech FBtr0300082|FBtr0300084|FBtr0300083|FBtr0300080 7478851|7481874|7480093|7481874 7483393|7483393|7483393|7483393 AGACTGA 7mer-A1 dme-miR-14-3p 2R - 7482857 7482922 3'utr wech FlyBase G15533.1 TGAAAATATTATTACCTGTTAGTTAGACTGAAAGGCAGTTTGCTAGCTGATAGAAGGAGGTACGAA 129 7482900 0.70257958 13 124 775 0.959390863 1.975431809 0.091370558 0.372093023 0.588832487 129 7 1 189 2R:7482857-7482922 7 147.5 1503 FBgn0259745 2441.89 39.74 61.13333333 0.060404031 3.711625566 2.412758997 2 2 2 0.15 dme-miR-8-3p 7mer-m8 CAGTATT 2R 7490928 7490934 - 2R_7490928_7490934_- 0.577380895 0.575648077 0.576514486 0.001225275 Coop FBtr0329876|FBtr0088984 7490834|7490834 7491048|7491048 2R - 7490844 7491014 3'utr Coop FlyBase G20494.1 ACTTTATAAGCCTAGCTTACAGTATTATAAGAACGCGACTGACTAACTCTGTGAATCTGCCTACATACGTAGCATGTAATCAGTATTCCGGCCTGCTTTCCTTCATACCAACACACTTCAATACATACCATATTGCATTACAATACATATTTACACTTCAAATAGACGATC 1332 7490929 0.986804976 28 1307 11306 0.982524272 2.227029262 0.150161812 0.13963964 0.258252427 1332 19 8 1518 2R:7490844-7491014 7 Coop FBtr0329876|FBtr0088984 7490834|7490834 7491048|7491048 CAGTATT 7mer-m8 dme-miR-8-3p 2R - 7490899 7491015 3'utr Coop FlyBase G15552.1 TACTTTATAAGCCTAGCTTACAGTATTATAAGAACGCGACTGACTAACTCTGTGAATCTGCCTACATACGTAGCATGTAATCAGTATTCCGGCCTGCTTTCCTTCATACCAACACAC 1000 7490929 0.820737119 23 966 8069 0.973614776 2.390935107 0.132585752 0.363 0.579815303 1000 35 5 1476 2R:7490899-7491015 7 911 1504 FBgn0263240 183.6266667 15.05666667 22.94666667 4.961153064 60.5047598 39.70075537 -5 -5 -5 0.15 dme-miR-1007-3p 6mer2-7 GAGCTT 2R 7494721 7494726 - 2R_7494721_7494726_- 0.926620946 0.916881564 0.921751255 0.006886725 CG1620 FBtr0300830 7494010 7494823 2R - 7494700 7494752 3'utr CG1620 FlyBase G20512.1 TGGAAGAAGAGTGAGCGCCGGGATCAGAGCTTTGCTTTAAACGACACCATCGA 8 7494721 0.960619817 4 8 41 1 0.903089987 0.375 0 0 8 0 0 8 2R:7494700-7494752 6 CG1620 FBtr0300830 7494010 7494823 GAGCTT 6mer2-7 dme-miR-1007-3p 2R - 7494702 7494747 3'utr CG1620 FlyBase G15563.1 GAAGAGTGAGCGCCGGGATCAGAGCTTTGCTTTAAACGACACCATC 14 7494721 0.700856862 5 14 78 1 1.361727836 0.347826087 0.5 0.695652174 14 0 0 23 2R:7494702-7494747 6 10.5 1505 FBgn0033183 539.2866667 29.41333333 45.03 0.019470164 0.356980961 0.233177881 -5 -5 -5 0.15 dme-bantam-3p 6mer3-8 TGATCT 2R 7507528 7507533 + 2R_7507528_7507533_+ 0.96824848 0.97542015 0.971834315 0.005071158 didum FBtr0089744 7505871 7508237 2R + 7507510 7507563 3'utr didum FlyBase G13547.1 GGATGTTCAGACCATTTGTGATCTGTGTACTTCTCTGAGCACGGCGCAGGTCCT 16 7507525 0.987291717 5 16 144 1 1.204119983 0.25 0 0 16 0 0 16 2R:7507510-7507563 6 didum FBtr0089744 7505871 7508237 TGATCT 6mer3-8 dme-bantam-3p 2R + 7507513 7507562 3'utr didum FlyBase G10321.1 TGTTCAGACCATTTGTGATCTGTGTACTTCTCTGAGCACGGCGCAGGTCC 7 7507533 0.981461847 3 5 42 0.888888889 0.903089987 0.111111111 0.142857143 0.333333333 7 1 0 8 2R:7507513-7507562 6 10 1506 FBgn0261397 963.6266667 18.58333333 28.54333333 0.010377463 0.538116592 0.350344505 3 -5 -1 0.15 dme-miR-34-5p 6mer3-8 CACTGC 2R 7507914 7507919 + 2R_7507914_7507919_+ 0.999801699 1 0.999900849 0.000140219 didum FBtr0089743|FBtr0089745|FBtr0089744 7507857|7507857|7505871 7508237|7508625|7508237 2R + 7507856 7507927 stop_codon didum FlyBase G13548.1 TAAACGTCGCGTGCCTGCGTCTTGCCGGTCGAGAACTTTGCCATTTTGGATGACATTACACTGCTTAGTTTT 13 7507912 0.932591288 7 12 92 0.933333333 1.146128036 0.133333333 0.153846154 0.266666667 13 1 0 14 2R:7507856-7507927 6 didum FBtr0089744|FBtr0089745|FBtr0089743 7505871|7507857|7507857 7508237|7508625|7508237 CACTGC 6mer3-8 dme-miR-34-5p 2R + 7507865 7507927 3'utr didum FlyBase G10322.1 CGTGCCTGCGTCTTGCCGGTCGAGAACTTTGCCATTTTGGATGACATTACACTGCTTAGTTTT 6 7507912 0.990134796 5 5 45 1 1.113943352 0.153846154 0.666666667 0.846153846 6 0 0 13 2R:7507865-7507927 6 5 1507 FBgn0261397 963.6266667 18.58333333 28.54333333 0.005188731 0.269058296 0.175172253 2 2 2 0.15 dme-miR-79-3p 6mer3-8 TAGCTT 2R 7508048 7508053 + 2R_7508048_7508053_+ 0.935937086 0.996401327 0.966169206 0.042754646 didum FBtr0089743|FBtr0089745|FBtr0089744 7507857|7507857|7505871 7508237|7508625|7508237 2R + 7508010 7508066 3'utr didum FlyBase G13549.1 TAGAGCCGTTTTGCCGAAATGTTTGTGTAGTTCCTGTTTAGCTTAAATACCCGTTGT 16 7508047 0.991882828 8 14 156 0.944444444 1.230448921 0.111111111 0.0625 0.166666667 16 1 0 17 2R:7508010-7508066 6 didum FBtr0089744|FBtr0089745|FBtr0089743 7505871|7507857|7507857 7508237|7508625|7508237 TAGCTT 6mer3-8 dme-miR-79-3p 2R + 7508026 7508066 3'utr didum FlyBase G10323.1 AAATGTTTGTGTAGTTCCTGTTTAGCTTAAATACCCGTTGT 16 7508047 0.728151613 6 16 178 1 1.491361694 0.032258065 0.6875 0.838709677 16 0 0 31 2R:7508026-7508066 6 15 1508 FBgn0261397 963.6266667 18.58333333 28.54333333 0.015566194 0.807174888 0.525516758 1 1 1 0.15 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 7522477 7522484 - 2R_7522477_7522484_- 0.332946821 0.60428162 0.468614221 0.191862677 Orc1 FBtr0088959 7522435 7522683 2R - 7522437 7522498 3'utr Orc1 FlyBase G20568.1 TTTAAACAATTTAAAGTACAAACTCGTTACTAAAAATACCAAATAGAACACCAGCACAGTGT 12 7522462 0.946033185 5 12 52 1 1.176091259 0.066666667 0.166666667 0.333333333 12 0 0 15 2R:7522437-7522498 8 Orc1 FBtr0088959 7522435 7522683 AGTACAAA 8mer-A1 dme-miR-305-5p 2R - 7522444 7522501 3'utr Orc1 FlyBase G15605.1 ATGTTTAAACAATTTAAAGTACAAACTCGTTACTAAAAATACCAAATAGAACACCAGC 16 7522488 0.870251502 6 14 88 0.857142857 1.255272505 0.095238095 0.1875 0.380952381 16 3 0 18 2R:7522444-7522501 8 8 1509 FBgn0022772 387.5666667 14.83333333 22.67666667 0.02064161 0.539325843 0.352785536 -22 4 -9 0.15 dme-miR-283-5p 8mer-A1 TGATATTA 2R 7580650 7580657 + 2R_7580650_7580657_+ 0.592150168 0.592185425 0.592167796 2.49E-05 Vps13 FBtr0088910|FBtr0310024 7580470|7580470 7580675|7580675 2R + 7580614 7580664 3'utr Vps13 FlyBase G13600.1 ATGTCGCACTTTTACGTATGTTAACAACCATGGTTTTGATATTAAAATTTT 10 7580648 0.98854002 5 10 95 1 1 0.1 0 0 10 0 0 10 2R:7580614-7580664 8 Vps13 FBtr0310024|FBtr0088910 7580470|7580470 7580675|7580675 TGATATTA 8mer-A1 dme-miR-283-5p 2R + 7580627 7580661 3'utr Vps13 FlyBase G10359.1 ACGTATGTTAACAACCATGGTTTTGATATTAAAAT 8 7580648 0.693611658 5 8 68 1 1.278753601 0 0.75 0.894736842 8 0 0 19 2R:7580627-7580661 8 8 1510 FBgn0033194 1638.743333 18.93 29.02666667 0.00488179 0.422609614 0.275608636 2 2 2 0.15 dme-miR-190-5p 8mer-m1 ACATATCT 2R 7651658 7651665 - 2R_7651658_7651665_- 0.577438173 0.576374662 0.576906417 0.000752008 CG17985 FBtr0088946 7651623 7652111 2R - 7651640 7651700 3'utr CG17985 FlyBase G20626.1 GGGATAGTTTCTCTTACGCCAAAAAAGTACGTAATACATATCTTAGAGCTAAATAAATAGT 11 7651658 0.981616119 5 10 68 0.916666667 1.041392685 0.25 0.090909091 0.166666667 11 1 0 11 2R:7651640-7651700 8 CG17985 FBtr0088946 7651623 7652111 ACATATCT 8mer-m1 dme-miR-190-5p 2R - 7651648 7651677 3'utr CG17985 FlyBase G15651.1 AAAGTACGTAATACATATCTTAGAGCTAAA 6 7651658 0.766135231 2 5 31 1 0.954242509 0.222222222 0.333333333 0.555555556 6 0 0 9 2R:7651648-7651677 8 6.5 1511 FBgn0033199 98.75333333 8.186666667 12.54333333 0.065820563 0.793973941 0.518203561 -7 -7 -7 0.15 dme-miR-1008-3p 7mer-A1 GCTGTGA 2R 7651813 7651819 - 2R_7651813_7651819_- 0.804138236 0.812501578 0.808319907 0.005913817 CG17985 FBtr0088946 7651623 7652111 2R - 7651798 7651846 3'utr CG17985 FlyBase G20627.1 AATTGCAGGATTCTAAGATCCGATTGTGCTGTGAATATAAATCGTAACC 15 7651822 0.975540418 3 15 116 1 1.230448921 0.117647059 0.133333333 0.235294118 15 0 0 17 2R:7651798-7651846 7 CG17985 FBtr0088946 7651623 7652111 GCTGTGA 7mer-A1 dme-miR-1008-3p 2R - 7651805 7651832 3'utr CG17985 FlyBase G15652.1 AAGATCCGATTGTGCTGTGAATATAAAT 13 7651822 0.719316456 2 11 79 1 1.361727836 0.130434783 0.615384615 0.782608696 13 0 0 23 2R:7651805-7651832 7 14 1512 FBgn0033199 98.75333333 8.186666667 12.54333333 0.141767367 1.71009772 1.116130747 3 3 3 0.15 dme-miR-970-3p 6mer2-7 CTTATG 2R 7667359 7667364 - 2R_7667359_7667364_- 0.999933811 0.999999464 0.999966638 4.65E-05 CG12042 FBtr0088944 7667246 7667400 2R - 7667312 7667410 stop_codon CG12042 FlyBase G20642.1 AGCCAACTAAACTGGAAACTTATTAGCCAACAGGCGTACTAATCGACTTATGCGAAATATGAAATATGCTTTATGAAAGCTAGAGAAATATGTATTTAT 23 7667368 0.970218556 10 22 126 0.965517241 1.447158031 0.034482759 0.173913043 0.344827586 23 1 0 28 2R:7667312-7667410 6 CG12042 FBtr0088944 7667246 7667400 CTTATG 6mer2-7 dme-miR-970-3p 2R - 7667327 7667386 3'utr CG12042 FlyBase G15662.1 AGCCAACAGGCGTACTAATCGACTTATGCGAAATATGAAATATGCTTTATGAAAGCTAGA 8 7667368 0.957780341 5 8 44 1 1.079181246 0.083333333 0.375 0.583333333 8 0 0 12 2R:7667327-7667386 6 9 1513 FBgn0033206 185.4566667 12.72666667 19.49666667 0.048528857 0.707176532 0.46161737 4 4 4 0.15 dme-miR-304-5p 7mer-A1 GAGATTA 2R 7716941 7716947 - 2R_7716941_7716947_- 0.688089258 0.78380584 0.735947549 0.067681786 CG18812 FBtr0088936 7716805 7719261 2R - 7716921 7716957 3'utr CG18812 FlyBase G20693.1 AATCGGAAACGAGATTAAGAATGATCGTCGTGGCACA 16 7716943 0.951843383 3 16 73 1 1.278753601 0.473684211 0.1875 0.315789474 16 0 0 19 2R:7716921-7716957 7 CG18812 FBtr0088936 7716805 7719261 GAGATTA 7mer-A1 dme-miR-304-5p 2R - 7716917 7716961 3'utr CG18812 FlyBase G15695.1 GTTAAATCGGAAACGAGATTAAGAATGATCGTCGTGGCACAAAAT 8 7716943 0.837867048 3 8 41 1 1.146128036 0.357142857 0.625 0.785714286 8 0 0 14 2R:7716917-7716961 7 12 1514 FBgn0042135 915.0533333 42.71666667 65.20333333 0.01311399 0.280920796 0.184039671 -4 -4 -4 0.15 dme-miR-252-5p 6mer3-8 GTACTT 2R 7718684 7718689 - 2R_7718684_7718689_- 0.999961417 0.999999531 0.999980474 2.69E-05 CG18812 FBtr0330328|FBtr0306239|FBtr0330327|FBtr0088935|FBtr0088937|FBtr0088936 7718444|7718444|7718277|7718444|7718277|7716805 7719261|7719261|7719237|7719261|7719261|7719261 2R - 7718661 7718783 5'utr CG18812 FlyBase G20697.1 AACGTTAGCAATGCTGAAGAAAATAAAATTTGATTAGAGACCCTGCATGTACCGGATATACACAAGATTATTCTAAATATGAAATTGATAAATTGTACTTGATACTTGATTACTGAAGGGAGA 33 7718690 0.97787248 10 33 221 1 1.556302501 0.194444444 0.060606061 0.138888889 33 0 0 36 2R:7718661-7718783 6 CG18812 FBtr0306239|FBtr0330328|FBtr0088936|FBtr0088937|FBtr0088935|FBtr0330327 7718444|7718444|7716805|7718277|7718444|7718277 7719261|7719261|7719261|7719261|7719261|7719237 GTACTT 6mer3-8 dme-miR-252-5p 2R - 7718583 7718698 5'utr CG18812 FlyBase G15697.1 TGATAAATTGTACTTGATACTTGATTACTGAAGGGAGACAGACGTATATATGAATAAGTATACATATTGTTAGTTATCTTTGCAATTACAAATTGTATTATTAATGTATTAATACT 13 7718690 0.987002199 8 13 120 1 1.322219295 0.142857143 0.461538462 0.666666667 13 0 0 21 2R:7718583-7718698 6 12 1515 FBgn0042135 915.0533333 42.71666667 65.20333333 0.01311399 0.280920796 0.184039671 1 1 1 0.15 dme-miR-31a-5p 6mer3-8 TCTTGC 2R 7737111 7737116 - 2R_7737111_7737116_- 0.988713201 0.981051687 0.984882444 0.005417499 CG30497 FBtr0331966 7737017 7740276 2R - 7737072 7737167 3'utr CG30497 FlyBase G20712.1 CTATATCTATACCATATACAACAATTACCATACATATTACTTCTGTGCGCTTCTTGCGATCTAAGGAATTTCAATAAAAACAAACAAAAATACCTA 74 7737114 0.987474166 16 72 637 0.97752809 1.939519253 0.078651685 0.175675676 0.314606742 74 2 0 87 2R:7737072-7737167 6 CG30497 FBtr0331966 7737017 7740276 TCTTGC 6mer3-8 dme-miR-31a-5p 2R - 7737052 7737167 3'utr CG30497 FlyBase G15707.1 CTATATCTATACCATATACAACAATTACCATACATATTACTTCTGTGCGCTTCTTGCGATCTAAGGAATTTCAATAAAAACAAACAAAAATACCTAAAAAGTATAAAACCGACGAA 57 7737114 0.941554859 15 53 447 0.962962963 1.892094603 0.111111111 0.315789474 0.518518519 57 3 0 78 2R:7737052-7737167 6 54.5 1516 FBgn0050497 2910.163333 68.06 105.1533333 0.018727471 0.800764032 0.51829075 -2 -2 -2 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 2R 7737616 7737621 - 2R_7737616_7737621_- 0.999639803 0.999737892 0.999688847 6.94E-05 CG30497 FBtr0331966 7737017 7740276 2R - 7737604 7737734 3'utr CG30497 FlyBase G20714.1 AGGACGATCATCTGAATTGATCTGATTTGTCGGAATTCTTTGGTTTTGCCAGCTGCAATGAAGAGGTTTATTTCATGTTTGGGTCCCATAGCTAATGCCTGGGCTGGGCGGATTGTGTTTTTACATACAAT 48 7737622 0.82279337 18 44 389 0.945454545 1.716003344 0.181818182 0.145833333 0.254545455 48 3 0 52 2R:7737604-7737734 6 CG30497 FBtr0331966 7737017 7740276 TGTGTT 6mer3-8 dme-miR-317-3p 2R - 7737604 7737654 3'utr CG30497 FlyBase G15711.1 GGGTCCCATAGCTAATGCCTGGGCTGGGCGGATTGTGTTTTTACATACAAT 22 7737622 0.749093456 6 22 183 1 1.447158031 0.321428571 0.227272727 0.392857143 22 0 0 28 2R:7737604-7737654 6 22.5 1517 FBgn0050497 2910.163333 68.06 105.1533333 0.007731525 0.330590655 0.213973245 1 1 1 0.15 dme-miR-283-5p 6mer3-8 TGATAT 2R 7738414 7738419 - 2R_7738414_7738419_- 0.832314739 0.900420926 0.866367833 0.048158356 CG30497 FBtr0331966|FBtr0088933|FBtr0088934 7737017|7737766|7737766 7740276|7740276|7740276 2R - 7738381 7738519 3'utr CG30497 FlyBase G20718.1 ATTTTCGGTGTGTCCTGACAACAGCAACATATTATGTTATGTAGGTATGTGAATGATTGATTGAGTGTATTGTTAAAACCAGCTGGTGATAATTAATGAATGATATAGACATGATATAGATATGCTCTAGACAACAAAT 125 7738414 0.846072919 23 119 843 0.960526316 1.86332286 0.243421053 0.2 0.342105263 125 5 1 146 2R:7738381-7738519 6 CG30497 FBtr0088934|FBtr0088933|FBtr0331966 7737766|7737766|7737017 7740276|7740276|7740276 TGATAT 6mer3-8 dme-miR-283-5p 2R - 7738391 7738553 3'utr CG30497 FlyBase G15715.1 AATGTGTAGAACGAAATGTCATATTTTGTAGAATATTTTCGGTGTGTCCTGACAACAGCAACATATTATGTTATGTAGGTATGTGAATGATTGATTGAGTGTATTGTTAAAACCAGCTGGTGATAATTAATGAATGATATAGACATGATATAGATATGCTCTA 75 7738414 0.97853577 21 73 495 0.974576271 1.583576586 0.279661017 0.426666667 0.63559322 75 1 2 115 2R:7738391-7738553 6 50.5 1518 FBgn0050497 2910.163333 68.06 105.1533333 0.017352978 0.74199236 0.480251062 -5 -5 -5 0.15 dme-miR-184-5p 6mer3-8 TGATAA 2R 7738719 7738724 - 2R_7738719_7738724_- 0.999843409 0.999204013 0.999523711 0.000452124 CG30497 FBtr0331966|FBtr0088933|FBtr0088934 7737017|7737766|7737766 7740276|7740276|7740276 2R - 7738555 7738790 3'utr CG30497 FlyBase G20719.1 AGACGAAGGCGGCGTTTTGGGTTCCAGTCTAGAAATTCCAAGCAACAATCTAATTGCAGGCTGAAATGATAATTTAAAGCGATGATATGTAAATATTAGTCAAATTAATATGTGGACGAGGATTCGGAAGTGTAGAGGATTTATATATATATATATATATATGTGTCTGGTGTACCAGAAGTTGCTCAATGAAATTCAATCCACAAAGCAAAGTTAAACCGAAATAAATTTTAAAG 119 7738724 0.976392336 32 112 723 0.932885906 1.540954809 0.201342282 0.159663866 0.32885906 119 7 3 139 2R:7738555-7738790 6 CG30497 FBtr0088934|FBtr0088933|FBtr0331966 7737766|7737766|7737017 7740276|7740276|7740276 TGATAA 6mer3-8 dme-miR-184-5p 2R - 7738647 7738784 3'utr CG30497 FlyBase G15716.2 AGGCGGCGTTTTGGGTTCCAGTCTAGAAATTCCAAGCAACAATCTAATTGCAGGCTGAAATGATAATTTAAAGCGATGATATGTAAATATTAGTCAAATTAATATGTGGACGAGGATTCGGAAGTGTAGAGGATTTAT 64 7738724 0.848749464 15 62 371 0.978723404 1.963787827 0.063829787 0.34375 0.553191489 64 2 0 92 2R:7738647-7738784 6 51 1519 FBgn0050497 2910.163333 68.06 105.1533333 0.01752479 0.749338819 0.485006023 0 0 0 0.15 dme-miR-14-3p 7mer-A1 AGACTGA 2R 7739315 7739321 - 2R_7739315_7739321_- 0.714087912 0.823346446 0.768717179 0.077257426 CG30497 FBtr0088932|FBtr0331966|FBtr0088933|FBtr0088934 7739112|7737017|7737766|7737766 7740276|7740276|7740276|7740276 2R - 7739275 7739445 3'utr CG30497 FlyBase G20721.1 ATTTCACTGTTCCTTTTCTATATCTCTAATTGAATGTGTCCGGCGACTTGAAAGCCTTTCCACGACACTTGGCACACACGCGCTCCTACTTTAATAATGTAACTATCCCGAGAGTTTGAACCGCAGACTGAACTTCAGCCGCTGTTAGATGTTGAACAGGGACACCACCTA 93 7739329 0.985039344 31 75 599 0.814159292 1.662757832 0.203539823 0.182795699 0.327433628 93 20 1 92 2R:7739275-7739445 7 CG30497 FBtr0088934|FBtr0088933|FBtr0331966|FBtr0088932 7737766|7737766|7737017|7739112 7740276|7740276|7740276|7740276 AGACTGA 7mer-A1 dme-miR-14-3p 2R - 7739291 7739501 3'utr CG30497 FlyBase G15718.1 CATTACTCATATATTCGGTTGGCTACTTTCTTCGTTAACTGTATGATCAGAGGTCTATTTCACTGTTCCTTTTCTATATCTCTAATTGAATGTGTCCGGCGACTTGAAAGCCTTTCCACGACACTTGGCACACACGCGCTCCTACTTTAATAATGTAACTATCCCGAGAGTTTGAACCGCAGACTGAACTTCAGCCGCTGTTAGATGTTGA 57 7739312 0.985806849 19 43 370 0.755555556 1.531478917 0.266666667 0.385964912 0.611111111 57 21 1 68 2R:7739291-7739501 7 42.5 1520 FBgn0050497 2910.163333 68.06 105.1533333 0.014603991 0.624449016 0.404171686 8 -9 -0.5 0.15 dme-miR-999-3p 6mer3-8 AGTTAA 2R 7787887 7787892 + 2R_7787887_7787892_+ 1 0.999999945 0.999999973 7.07E-08 CanB2 FBtr0088930|FBtr0309866 7787760|7787760 7788135|7789053 2R + 7787792 7787921 3'utr CanB2 FlyBase G13646.1 GATGTTATTTATTTATTTTATACACGTCGGCATCCTTCGATTGTCACTATCACCACTATTCATATGGTTATTATTTTTGATCGGCGATTCTCTATAGTTAAATATTGTTATGAGCCTTTGGCGAGCCAGT 30 7787908 0.994383499 17 19 255 0.666666667 1.079181246 0.194444444 0.133333333 0.277777778 30 11 1 24 2R:7787792-7787921 6 CanB2 FBtr0309866 7787760 7789053 AGTTAA 6mer3-8 dme-miR-999-3p 2R + 7787836 7787925 3'utr CanB2 FlyBase G10396.2 CACTATCACCACTATTCATATGGTTATTATTTTTGATCGGCGATTCTCTATAGTTAAATATTGTTATGAGCCTTTGGCGAGCCAGTTCAG 20 7787885 0.994248481 7 9 104 0.482758621 0.669006781 0.24137931 0.4 0.586206897 20 13 2 14 2R:7787836-7787925 6 5.5 1521 FBgn0015614 671.95 42.17666667 64.64333333 0.008185133 0.130403857 0.085082246 -21 2 -9.5 0.15 dme-miR-308-3p 8mer-m1 CTGTGATT 2R 7788280 7788287 + 2R_7788280_7788287_+ 0.385549567 0.385531907 0.385540737 1.25E-05 CanB2 FBtr0309866 7787760 7789053 2R + 7788233 7788308 3'utr CanB2 FlyBase G13648.1 CGAATGCACTTTCGCTCTATCATATTGATGTTATATTTCTAATTCTCCTGTGATTTTGCCAAAAACAAAACAAAAA 82 7788287 0.989321651 11 79 759 0.970588235 1.694605199 0.137254902 0.219512195 0.37254902 82 2 1 99 2R:7788233-7788308 8 CanB2 FBtr0309866 7787760 7789053 CTGTGATT 8mer-m1 dme-miR-308-3p 2R + 7788231 7788312 3'utr CanB2 FlyBase G10397.1 ATCGAATGCACTTTCGCTCTATCATATTGATGTTATATTTCTAATTCTCCTGTGATTTTGCCAAAAACAAAACAAAAAAAAA 72 7788287 0.989852015 11 70 690 0.97029703 1.991226076 0.148514851 0.333333333 0.524752475 72 3 0 98 2R:7788231-7788312 8 72.5 1522 FBgn0015614 671.95 42.17666667 64.64333333 0.107894933 1.71895993 1.1215387 -7 -7 -7 0.15 dme-miR-33-5p 7mer-m8 CAATGCA 2R 7800854 7800860 - 2R_7800854_7800860_- 0.673839373 0.67451467 0.674177022 0.000477509 Nop17l FBtr0088901|FBtr0088902|FBtr0088900 7800783|7800783|7800783 7801442|7801442|7801442 2R - 7800789 7800883 3'utr Nop17l FlyBase G20758.1 ATGTTTAGAAGCACTGGCTGAATCAATGCATGTAATTTTAACTTTTATAAGCGAGCTGCAAGTTAAAATACATATACATCTCTTATGAATGAGAA 115 7800861 0.986669353 11 112 968 0.946564885 1.792391689 0.198473282 0.113043478 0.221374046 115 6 1 124 2R:7800789-7800883 7 Nop17l FBtr0088902|FBtr0088900|FBtr0088901 7800783|7800783|7800783 7801442|7801442|7801442 CAATGCA 7mer-m8 dme-miR-33-5p 2R - 7800838 7800893 3'utr Nop17l FlyBase G15746.1 AGCTACGTACATGTTTAGAAGCACTGGCTGAATCAATGCATGTAATTTTAACTTTT 66 7800861 0.745426149 10 65 448 0.990291262 2.008600172 0.213592233 0.439393939 0.640776699 66 1 0 102 2R:7800838-7800893 7 84 1523 FBgn0033224 692.0466667 23.42333333 35.88666667 0.121379098 3.586167639 2.340702211 1 1 1 0.15 dme-miR-8-3p 7mer-A1 AGTATTA 2R 7800931 7800937 - 2R_7800931_7800937_- 0.821442735 0.814241184 0.817841959 0.005092229 Nop17l FBtr0088901|FBtr0088902|FBtr0088900 7800783|7800783|7800783 7801442|7801442|7801442 2R - 7800903 7801011 3'utr Nop17l FlyBase G20759.1 TGGCTCCATGCTCAGCTCATATAACAATCATAACACGATAAACCTAAACAATATCAATAGTTAACAATTCCTCTAGTATTACACACAACAAAATCACCCAATGCATAAG 26 7800937 0.974049211 13 23 153 0.911764706 1.190331698 0.029411765 0.192307692 0.382352941 26 2 1 31 2R:7800903-7801011 7 Nop17l FBtr0088902|FBtr0088900|FBtr0088901 7800783|7800783|7800783 7801442|7801442|7801442 AGTATTA 7mer-A1 dme-miR-8-3p 2R - 7800898 7800955 3'utr Nop17l FlyBase G15747.1 ATAGTTAACAATTCCTCTAGTATTACACACAACAAAATCACCCAATGCATAAGTAGAG 9 7800938 0.757729228 4 7 45 0.714285714 0.698970004 0 0.444444444 0.642857143 9 3 1 10 2R:7800898-7800955 7 9.5 1524 FBgn0033224 692.0466667 23.42333333 35.88666667 0.013727398 0.405578483 0.264722274 0 1 0.5 0.15 dme-miR-965-3p 6mer3-8 TACGCT 2R 7801142 7801147 - 2R_7801142_7801147_- 0.999981102 0.999987496 0.999984299 4.53E-06 Nop17l FBtr0088901|FBtr0088902|FBtr0088900 7800783|7800783|7800783 7801442|7801442|7801442 2R - 7801127 7801159 3'utr Nop17l FlyBase G20761.1 AAGATGAAATCCTACGCTGAACTGAAAAAGAAA 14 7801144 0.871131382 4 12 45 0.8125 1.113943352 0.3125 0.142857143 0.25 14 3 0 13 2R:7801127-7801159 6 Nop17l FBtr0088902|FBtr0088900|FBtr0088901 7800783|7800783|7800783 7801442|7801442|7801442 TACGCT 6mer3-8 dme-miR-965-3p 2R - 7801111 7801155 3'utr Nop17l FlyBase G15748.2 TGAAATCCTACGCTGAACTGAAAAAGAAACCTATTATTATAGATC 11 7801146 0.724848605 4 9 50 0.823529412 0.84509804 0.294117647 0.454545455 0.647058824 11 2 1 14 2R:7801111-7801155 6 12 1525 FBgn0033224 692.0466667 23.42333333 35.88666667 0.017339871 0.512309663 0.33438603 -3 -1 -2 0.15 dme-miR-1008-3p 6mer3-8 AGCTGT 2R 7809438 7809443 + 2R_7809438_7809443_+ 0.984687198 0.981709684 0.983198441 0.00210541 sax FBtr0308825|FBtr0088832|FBtr0088833 7809418|7809418|7809418 7810067|7810067|7810067 2R + 7809271 7809455 stop_codon sax FlyBase G13672.1 TAATGACTGGCATGTCCAAGCTCATGAAGGAGTGCTGGCACCAAAACCCCGACGTGCGCTTGCCAGCGCTGCGCATCAAAAAGACTATACATAAGCTGGCTTCCGCTGACGAGAAGATACGCCTGGACTTCGACGAGGTCTGCGTTTAGTGGTAGTAGTCGAGCCTTAGCTGTAAGCGGTAATTT 164 7809436 0.833178411 21 160 801 0.980099502 2.294466226 0.373134328 0.195121951 0.343283582 164 4 0 197 2R:7809271-7809455 6 sax FBtr0088833|FBtr0308825|FBtr0088832 7809418|7809418|7809418 7810067|7810067|7810067 AGCTGT 6mer3-8 dme-miR-1008-3p 2R + 7809317 7809451 stop_codon sax FlyBase G10408.1 CCCCGACGTGCGCTTGCCAGCGCTGCGCATCAAAAAGACTATACATAAGCTGGCTTCCGCTGACGAGAAGATACGCCTGGACTTCGACGAGGTCTGCGTTTAGTGGTAGTAGTCGAGCCTTAGCTGTAAGCGGTA 115 7809436 0.918995346 11 113 625 0.983146067 1.765916794 0.494382022 0.382608696 0.601123596 115 1 2 175 2R:7809317-7809451 6 70 1526 FBgn0003317 608.98 30.24 46.27666667 0.114946304 2.314814815 1.51264136 2 2 2 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 2R 7810003 7810009 + 2R_7810003_7810009_+ 0.782908986 0.782911326 0.782910156 1.63E-06 sax FBtr0308825|FBtr0088832|FBtr0088833 7809418|7809418|7809418 7810067|7810067|7810067 2R + 7809790 7810065 3'utr sax FlyBase G13674.1 ATTGTTCATCAAGTGCCATTTGCAATTGAGAATTGTAAACGCCTTAACTTTAAGCTCACTCTTTGAACTTTACACTAAATTCATAACTCTAGAACTTGTCCATGCTATGATAAAACCATAAGCCACACCACCAACTGACTTGCTATCTTAGTTAGTTAAGCCTTTAGGACTTAGATACCCACGCATAGAAGCATACACACCTACTTGTATATTGTACAAATGGCAAGCTATTTAAGTTTTGTATAGTCTAAACGAAATGAAATACACGAATAGGCA 152 7810000 0.94802794 36 146 1070 0.974747475 2.285557309 0.126262626 0.263157895 0.434343434 152 5 0 193 2R:7809790-7810065 7 sax FBtr0088833|FBtr0308825|FBtr0088832 7809418|7809418|7809418 7810067|7810067|7810067 GTACAAA 7mer-A1 dme-miR-305-5p 2R + 7809783 7810060 3'utr sax FlyBase G10411.1 ATTATTCATTGTTCATCAAGTGCCATTTGCAATTGAGAATTGTAAACGCCTTAACTTTAAGCTCACTCTTTGAACTTTACACTAAATTCATAACTCTAGAACTTGTCCATGCTATGATAAAACCATAAGCCACACCACCAACTGACTTGCTATCTTAGTTAGTTAAGCCTTTAGGACTTAGATACCCACGCATAGAAGCATACACACCTACTTGTATATTGTACAAATGGCAAGCTATTTAAGTTTTGTATAGTCTAAACGAAATGAAATACACGAAT 104 7810001 0.982192411 26 96 712 0.891156463 1.640150041 0.081632653 0.288461538 0.496598639 104 14 2 131 2R:7809783-7810060 7 63 1527 FBgn0003317 608.98 30.24 46.27666667 0.103451673 2.083333333 1.361377224 3 2 2.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 7915134 7915140 - 2R_7915134_7915140_- 0.628905789 0.573647826 0.601276807 0.039073307 CG12159 FBtr0088889|FBtr0088889|FBtr0088889 7915025|7915025|7915025 7915167|7915167|7915167 2R - 7915045 7915158 3'utr CG12159 FlyBase G20817.1 AAGGAAAACAAAACCACTTGTGATAACGATTACGATGATATGTATGCAAGGCATTAAAAATCTCATAAATACCAATGCTTTCAAATCGCCTCTGCGTCGATGTTCCATATAAAT 60 7915141 0.963796414 14 56 290 0.950617284 1.40936947 0.135802469 0.266666667 0.456790123 60 2 2 77 2R:7915045-7915158 7 CG12159 FBtr0088889|FBtr0088889|FBtr0088889 7915025|7915025|7915025 7915167|7915167|7915167 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 7915083 7915159 3'utr CG12159 FlyBase G15799.1 AAAGGAAAACAAAACCACTTGTGATAACGATTACGATGATATGTATGCAAGGCATTAAAAATCTCATAAATACCAAT 33 7915141 0.937503461 7 33 130 1 1.633468456 0.046511628 0.303030303 0.465116279 33 0 0 43 2R:7915083-7915159 7 34 1528 FBgn0033232 247.6666667 34.99333333 53.14 0.137281292 0.971613641 0.639819345 1 1 1 0.15 dme-miR-92b-3p 8mer-m1 GTGCAATT 2R 7920582 7920589 + 2R_7920582_7920589_+ 0.590496556 0.534776566 0.562636561 0.03939999 Cul1 FBtr0088847|FBtr0088845|FBtr0088846|FBtr0088848 7920404|7920404|7920404|7920404 7920898|7920898|7921579|7920898 2R + 7920554 7920613 3'utr Cul1 FlyBase G13724.1 TAAAAATACTCCATGCTTCGCATAAAATGTGCAATTCTCGCCAACGCGTCACTAACTCCA 21 7920588 0.750688644 3 19 122 1 1.397940009 0 0.142857143 0.28 21 0 0 25 2R:7920554-7920613 8 Cul1 FBtr0088847|FBtr0088845|FBtr0088846|FBtr0088848 7920404|7920404|7920404|7920404 7920898|7920898|7921579|7920898 GTGCAATT 8mer-m1 dme-miR-92b-3p 2R + 7920553 7920688 3'utr Cul1 FlyBase G10451.1 CTAAAAATACTCCATGCTTCGCATAAAATGTGCAATTCTCGCCAACGCGTCACTAACTCCATCTTCCGACACCCAGCACCTCATTCAAAGAAAAGGCCAGTCGCAGGGATCAAGTGAACCTATTGACCAGATCACA 12 7920588 0.964820849 7 10 52 0.888888889 1.204119983 0.222222222 0.416666667 0.611111111 12 2 0 16 2R:7920553-7920688 8 10.5 1529 FBgn0015509 2248.283333 84.08 129.1466667 0.00467023 0.124881066 0.081302911 -6 -6 -6 0.15 dme-miR-283-5p 6mer3-8 TGATAT 2R 7929856 7929861 - 2R_7929856_7929861_- 0.989852536 0.960844004 0.97534827 0.020512107 CG30381 FBtr0113374|FBtr0339129 7929656|7929656 7929980|7929980 2R - 7929842 7929884 3'utr CG30381 FlyBase G20828.1 GTTTGCATAGAAAACTCACTTATTGATATAGTTAAAGCGACTT 9 7929865 0.827672349 4 9 71 1 1.041392685 0.181818182 0.222222222 0.363636364 9 0 0 11 2R:7929842-7929884 6 CG30381 FBtr0339129|FBtr0113374 7929656|7929656 7929980|7929980 TGATAT 6mer3-8 dme-miR-283-5p 2R - 7929829 7929891 3'utr CG30381 FlyBase G15807.1 ATATGCTGTTTGCATAGAAAACTCACTTATTGATATAGTTAAAGCGACTTCAGCAGCTTCGAA 9 7929864 0.984813254 7 9 71 1 1.079181246 0.083333333 0.333333333 0.5 9 0 0 12 2R:7929829-7929891 6 7 1530 FBgn0050381 66.98 6.973333333 10.62333333 0.104508809 1.003824092 0.65892689 4 3 3.5 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 2R 7942171 7942177 - 2R_7942171_7942177_- 0.521223801 0.521223853 0.521223827 7.07E-08 CG14764 FBtr0088880|FBtr0339128 7942041|7942041 7942634|7942634 2R - 7942153 7942203 3'utr CG14764 FlyBase G20843.1 ATAAAAACATCAAATGGCATACATTTTGTGATTGTATTTTATAGTTACTCA 160 7942179 0.672975227 9 152 1942 0.949748744 1.674401813 0.125628141 0.1875 0.346733668 160 7 3 189 2R:7942153-7942203 7 CG14764 FBtr0339128|FBtr0088880 7942041|7942041 7942634|7942634 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 7942121 7942201 3'utr CG14764 FlyBase G15816.1 AAAAACATCAAATGGCATACATTTTGTGATTGTATTTTATAGTTACTCACGCGTAGACAAACATATACAGTATATAAATAT 124 7942179 0.865553592 13 117 1413 0.946808511 1.551449998 0.14893617 0.362903226 0.579787234 124 6 4 178 2R:7942121-7942201 7 138 1531 FBgn0033236 872.35 39.06666667 59.99333333 0.158193386 3.532423208 2.300255584 2 2 2 0.15 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 7966475 7966480 + 2R_7966475_7966480_+ 0.923757314 0.997377963 0.960567639 0.052057696 nito FBtr0088857 7965281 7966686 2R + 7966448 7966496 3'utr nito FlyBase G13749.1 AATCCGAGCAGTTCACCCAGTGCATGTGCTGTGTATGCGTGTGTTCGCA 9 7966472 0.918889718 2 9 81 1 1 0.2 0.111111111 0.2 9 0 0 10 2R:7966448-7966496 6 nito FBtr0088857 7965281 7966686 GCTGTG 6mer2-7 dme-miR-1008-3p 2R + 7966453 7966493 3'utr nito FlyBase G10468.1 GAGCAGTTCACCCAGTGCATGTGCTGTGTATGCGTGTGTTC 4 7966473 0.984592317 3 4 35 1 0.84509804 0 0.5 0.714285714 4 0 0 7 2R:7966453-7966493 6 6.5 1532 FBgn0027548 736.9233333 25.16 38.30666667 0.008820456 0.258346582 0.169683258 3 2 2.5 0.15 dme-miR-282-5p 6mer3-8 AGAGGC 2R 7969139 7969144 - 2R_7969139_7969144_- 0.999972333 0.999979565 0.999975949 5.16E-06 CG8726 FBtr0088874|FBtr0088873|FBtr0301231 7968127|7968127|7968127 7969258|7969258|7969823 2R - 7969131 7969172 3'utr CG8726 FlyBase G20867.1 ACTAATCGAATTCCAAAAGCTACATTTTAGAGGCATATTAAG 7 7969162 0.815869123 4 6 42 0.909090909 1 0 0.571428571 0.727272727 7 1 0 10 2R:7969131-7969172 6 CG8726 FBtr0301231|FBtr0088874|FBtr0088873 7968127|7968127|7968127 7969823|7969258|7969258 AGAGGC 6mer3-8 dme-miR-282-5p 2R - 7969081 7969179 3'utr CG8726 FlyBase G15833.1 AACTTGAACTAATCGAATTCCAAAAGCTACATTTTAGAGGCATATTAAGAAACAGAATACTAGCAGATCGAAGACACCGCTGAGCATAGAATAGTCCCA 9 7969162 0.970068225 6 9 49 1 1.113943352 0 0.444444444 0.615384615 9 0 0 13 2R:7969081-7969179 6 3.5 1533 FBgn0033244 852.3333333 30.71666667 47.01 0.004106375 0.113944655 0.074452244 18 18 18 0.15 dme-miR-276a-3p 6mer2-7 GTTCCT 2R 8075716 8075721 + 2R_8075716_8075721_+ 0.999040373 0.996738311 0.997889342 0.001627831 lig FBtr0330630 8075416 8078815 2R + 8075698 8075762 3'utr lig FlyBase G13790.1 AGTGCGCCCATGCTAAATGTTCCTTACGCCTACTTCTATGGTGGCAATGTAATGCCCGGTAGTTT 41 8075715 0.824223447 7 38 279 0.936170213 1.342422681 0.106382979 0.175 0.29787234 40 2 1 44 2R:8075698-8075762 6 lig FBtr0330630 8075416 8078815 GTTCCT 6mer2-7 dme-miR-276a-3p 2R + 8075698 8075763 3'utr lig FlyBase G10492.1 AGTGCGCCCATGCTAAATGTTCCTTACGCCTACTTCTATGGTGGCAATGTAATGCCCGGTAGTTTT 31 8075715 0.898343073 5 29 198 0.976190476 1.311753861 0.095238095 0.3 0.5 30 0 1 41 2R:8075698-8075763 6 30 1534 FBgn0020279 5206.013333 127.7666667 197.3133333 0.005762567 0.234803026 0.152042437 1 1 1 0.15 dme-miR-14-3p 6mer2-7 AGACTG 2R 8076017 8076022 + 2R_8076017_8076022_+ 0.999999503 0.999999925 0.999999714 2.83E-07 lig FBtr0330630 8075416 8078815 2R + 8075975 8076079 3'utr lig FlyBase G13792.1 AGGGCGGCTACTCGTCGAGCGTGAATCAGCAGAGCAAAACTCAGACTGTGTCCAACCAGTCGCAGGCAGGCACTGGATCCGATCTGACCTCTTCTATGTACGGAA 40 8076015 0.934436514 10 39 153 0.962264151 1.707570176 0.150943396 0.3 0.471698113 40 2 0 51 2R:8075975-8076079 6 lig FBtr0330630 8075416 8078815 AGACTG 6mer2-7 dme-miR-14-3p 2R + 8075976 8076037 3'utr lig FlyBase G10493.1 GGGCGGCTACTCGTCGAGCGTGAATCAGCAGAGCAAAACTCAGACTGTGTCCAACCAGTCGC 16 8076015 0.930839993 4 15 55 0.892857143 0.795880017 0.142857143 0.4375 0.678571429 16 0 3 25 2R:8075976-8076037 6 22.5 1535 FBgn0020279 5206.013333 127.7666667 197.3133333 0.004321925 0.17610227 0.114031828 2 2 2 0.15 dme-miR-308-3p 8mer-m1 CTGTGATT 2R 8076777 8076784 + 2R_8076777_8076784_+ 0.347118823 0.317427782 0.332273303 0.020994707 lig FBtr0100575 8076675 8077042 2R + 8076764 8076800 3'utr lig FlyBase G13795.1 GTACACTTGTTGACTGTGATTACATATAGGTTTATGT 16 8076774 0.69163216 4 16 153 1 1.278753601 0.052631579 0.1875 0.315789474 16 0 0 19 2R:8076764-8076800 8 lig FBtr0100575 8076675 8077042 CTGTGATT 8mer-m1 dme-miR-308-3p 2R + 8076763 8076804 3'utr lig FlyBase G10497.1 TGTACACTTGTTGACTGTGATTACATATAGGTTTATGTCCTT 19 8076773 0.670633392 7 18 185 0.9375 1.477121255 0.03125 0.421052632 0.65625 19 2 0 30 2R:8076763-8076804 8 17.5 1536 FBgn0020279 5206.013333 127.7666667 197.3133333 0.003361497 0.136968432 0.088691421 3 4 3.5 0.15 dme-miR-980-5p 6mer3-8 GAAAAA 2R 8078695 8078700 + 2R_8078695_8078700_+ 0.664722124 0.554224323 0.609473223 0.078133744 lig FBtr0301917|FBtr0301916|FBtr0304681|FBtr0330630|FBtr0346957|FBtr0088776|FBtr0330631|FBtr0304682|FBtr0088775|FBtr0088774|FBtr0301915 8077828|8077828|8077828|8075416|8077828|8077828|8078296|8077828|8077828|8077828|8077828 8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815 2R + 8078672 8078707 3'utr lig FlyBase G13800.1 AACCACAAACATAACGTGAATGAGAAAAAACAAAAC 8 8078692 0.846661893 3 8 16 1 0.954242509 0.444444444 0.125 0.222222222 8 0 0 9 2R:8078672-8078707 6 lig FBtr0088776|FBtr0330631|FBtr0088775|FBtr0301915|FBtr0330630|FBtr0304682|FBtr0346957|FBtr0088774|FBtr0304681|FBtr0301917|FBtr0301916 8077828|8078296|8077828|8077828|8075416|8077828|8077828|8077828|8077828|8077828|8077828 8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815|8078815 GAAAAA 6mer3-8 dme-miR-980-5p 2R + 8078671 8078705 3'utr lig FlyBase G10502.1 AAACCACAAACATAACGTGAATGAGAAAAAACAAA 11 8078692 0.884746274 3 11 21 1 1.322219295 0.142857143 0.545454545 0.761904762 11 0 0 21 2R:8078671-8078705 6 9 1537 FBgn0020279 5206.013333 127.7666667 197.3133333 0.00172877 0.070440908 0.045612731 3 3 3 0.15 dme-miR-13b-2-5p 8mer-m1 TTTGACGC 2R 8079035 8079042 - 2R_8079035_8079042_- 0.558130959 0.354808066 0.456469512 0.143771001 Vps28 FBtr0310370 8078867 8079317 2R - 8079028 8079081 3'utr Vps28 FlyBase G20923.1 CTAATAAAAGGTGCATCTTCAATCTTCATGGATCAGTATTTTGACGCATATAGG 13 8079041 0.939967458 6 11 106 0.882352941 0.875061263 0 0.307692308 0.470588235 13 1 1 15 2R:8079028-8079081 8 Vps28 FBtr0310370 8078867 8079317 TTTGACGC 8mer-m1 dme-miR-13b-2-5p 2R - 8079032 8079070 3'utr Vps28 FlyBase G15871.1 TGCATCTTCAATCTTCATGGATCAGTATTTTGACGCATA 10 8079049 0.956123103 6 9 71 0.866666667 0.636822098 0.133333333 0.4 0.6 10 0 2 13 2R:8079032-8079070 8 9 1538 FBgn0021814 287.86 39.29666667 59.69 0.031265198 0.229027059 0.150779025 -1 7 3 0.15 dme-miR-283-5p 7mer-A1 GATATTA 2R 8079259 8079265 - 2R_8079259_8079265_- 0.762639725 0.776487164 0.769563444 0.009791661 Vps28 FBtr0310370 8078867 8079317 2R - 8079220 8079338 stop_codon Vps28 FlyBase G20924.1 AAGCTGCTGCACAGCCAGTAGCTATCAGTTTCTCATTGTTTACGTGTATCCCTAAATTTATATAGCATGTTCCGATATTAAACAAGTTTGATATATCACCTTACTTTTAGCGCAGACTA 31 8079271 0.989249939 10 28 273 0.923076923 1.255272505 0.076923077 0.258064516 0.41025641 31 2 1 36 2R:8079220-8079338 7 Vps28 FBtr0310370 8078867 8079317 GATATTA 7mer-A1 dme-miR-283-5p 2R - 8079245 8079325 stop_codon Vps28 FlyBase G15872.1 GCCAGTAGCTATCAGTTTCTCATTGTTTACGTGTATCCCTAAATTTATATAGCATGTTCCGATATTAAACAAGTTTGATAT 20 8079271 0.988412363 8 19 185 0.967741935 1.477121255 0.064516129 0.35 0.580645161 20 1 0 30 2R:8079245-8079325 7 16.5 1539 FBgn0021814 287.86 39.29666667 59.69 0.05731953 0.419882942 0.276428212 6 6 6 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 2R 8086793 8086799 + 2R_8086793_8086799_+ 0.780897578 0.782904341 0.781900959 0.001418951 sut1 FBtr0088777 8086579 8087151 2R + 8086770 8086806 3'utr sut1 FlyBase G13808.2 CCGCCTAGCCTGTAAGTTCTTTTGTACAAACCAATAA 9 8086791 0.68849166 2 8 69 1 1.113943352 0 0.222222222 0.461538462 9 0 0 13 2R:8086770-8086806 7 sut1 FBtr0088777 8086579 8087151 GTACAAA 7mer-A1 dme-miR-305-5p 2R + 8086772 8086805 3'utr sut1 FlyBase G10511.1 GCCTAGCCTGTAAGTTCTTTTGTACAAACCAATA 8 8086791 0.97754337 2 8 59 1 1.041392685 0 0.375 0.545454545 8 0 0 11 2R:8086772-8086805 7 8 1540 FBgn0028563 340.6433333 17.19333333 26.42666667 0.023484975 0.465296627 0.302724521 2 2 2 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT 2R 8101980 8101986 + 2R_8101980_8101986_+ 0.658883091 0.658880441 0.658881766 1.91E-06 CG11210 FBtr0088781 8101903 8102306 2R + 8101947 8102058 3'utr CG11210 FlyBase G13825.1 TATCTACAAAAGCCACTAAGAACTTTTCAAGTTGGCAGCTTTGATTTGCATACGAAAGAATGACAGGAGGATAACAGCAAGGCAATTTGTGATACCTAAACCAGCCTCAATG 601 8101978 0.981650021 17 576 5224 0.959654179 1.64738297 0.103746398 0.141430948 0.25648415 601 14 14 666 2R:8101947-8102058 7 CG11210 FBtr0088781 8101903 8102306 GGCAGCT 7mer-m8 dme-miR-980-3p 2R + 8101952 8102056 3'utr CG11210 FlyBase G10524.1 ACAAAAGCCACTAAGAACTTTTCAAGTTGGCAGCTTTGATTTGCATACGAAAGAATGACAGGAGGATAACAGCAAGGCAATTTGTGATACCTAAACCAGCCTCAA 421 8101978 0.895021184 17 401 3635 0.958333333 1.562642679 0.106481481 0.363420428 0.586419753 421 11 16 621 2R:8101952-8102056 7 434.5 1541 FBgn0033259 595.3333333 24.97666667 38.03333333 0.729843225 17.39623649 11.42418931 2 2 2 0.15 dme-bantam-3p 6mer3-8 TGATCT 2R 8102109 8102114 + 2R_8102109_8102114_+ 0.999999979 0.998803966 0.999401973 0.0008457 CG11210 FBtr0088781 8101903 8102306 2R + 8102077 8102129 3'utr CG11210 FlyBase G13826.1 CTGCACGCGAAAGCGATAGCAATATTTATTTCTGATCTGTATATAATCTACCT 21 8102102 0.991404109 9 19 208 0.956521739 1.041392685 0.086956522 0.095238095 0.173913043 21 0 1 22 2R:8102077-8102129 6 CG11210 FBtr0088781 8101903 8102306 TGATCT 6mer3-8 dme-bantam-3p 2R + 8102065 8102145 3'utr CG11210 FlyBase G10525.1 TTAATATGACCCCTGCACGCGAAAGCGATAGCAATATTTATTTCTGATCTGTATATAATCTACCTAATTTCCCAATTTTAT 17 8102102 0.993665925 8 15 179 0.88 1.342422681 0 0.411764706 0.6 17 3 0 22 2R:8102065-8102145 6 16.5 1542 FBgn0033259 595.3333333 24.97666667 38.03333333 0.027715566 0.660616575 0.433829974 7 7 7 0.15 dme-miR-277-3p 6mer3-8 TGCATT 2R 8102254 8102259 + 2R_8102254_8102259_+ 0.797930356 0.527090442 0.662510399 0.191512801 CG11210 FBtr0088781 8101903 8102306 2R + 8102239 8102324 3'utr CG11210 FlyBase G13827.2 AAATGAAACACGAAGTGCATTATATTTTCAAGTAATTTTTTATTTATGGTAAATAAAAAACTATTAAGTTATGCGTATCTCTTTTT 9 8102259 0.989644327 7 8 68 1 1.079181246 0.166666667 0.222222222 0.416666667 9 0 0 12 2R:8102239-8102324 6 CG11210 FBtr0088781 8101903 8102306 TGCATT 6mer3-8 dme-miR-277-3p 2R + 8102180 8102264 3'utr CG11210 FlyBase G10526.1 CTGCTTAACAAAGGGCTCGACGCTGATTTTTTGAAGCAGTAATGCTGGTAATATTTTACAAATGAAACACGAAGTGCATTATATT 10 8102258 0.967804344 9 10 60 1 1.146128036 0.285714286 0.4 0.571428571 10 0 0 14 2R:8102180-8102264 6 3.5 1543 FBgn0033259 595.3333333 24.97666667 38.03333333 0.005879059 0.140130789 0.09202454 -5 -4 -4.5 0.15 dme-miR-283-5p 8mer-A1 TGATATTA 2R 8114367 8114374 - 2R_8114367_8114374_- 0.591520131 0.51712612 0.554323125 0.052604502 Asap FBtr0300954|FBtr0339300 8114284|8114284 8115265|8115265 2R - 8114315 8114423 3'utr Asap FlyBase G20953.1 ATTTTGTATACACGTTTCAGTATTTATTTAGCAAAACCTTAAAGCATATTGATATTATATGTAAGTCAAATAAACGGAAGAACATAACGCTTATTACATATATACACAT 93 8114376 0.835306613 14 86 843 0.93 1.667452953 0.14 0.064516129 0.13 93 6 1 93 2R:8114315-8114423 8 Asap FBtr0339300|FBtr0300954 8114284|8114284 8115265|8115265 TGATATTA 8mer-A1 dme-miR-283-5p 2R - 8114317 8114427 3'utr Asap FlyBase G15890.1 ACTCATTTTGTATACACGTTTCAGTATTTATTTAGCAAAACCTTAAAGCATATTGATATTATATGTAAGTCAAATAAACGGAAGAACATAACGCTTATTACATATATACAC 46 8114376 0.799174248 12 43 420 0.953846154 1.491361694 0.076923077 0.304347826 0.507692308 46 2 1 62 2R:8114317-8114427 8 27 1544 FBgn0050372 698.41 18.11666667 27.74 0.03865924 1.490340386 0.97332372 2 2 2 0.15 dme-miR-8-3p 7mer-m8 CAGTATT 2R 8114400 8114406 - 2R_8114400_8114406_- 0.632696651 0.660666393 0.646681522 0.019777565 Asap FBtr0300954|FBtr0339300 8114284|8114284 8115265|8115265 2R - 8114315 8114423 3'utr Asap FlyBase G20953.1 ATTTTGTATACACGTTTCAGTATTTATTTAGCAAAACCTTAAAGCATATTGATATTATATGTAAGTCAAATAAACGGAAGAACATAACGCTTATTACATATATACACAT 93 8114377 0.835306613 14 86 843 0.93 1.667452953 0.14 0.064516129 0.13 93 6 1 93 2R:8114315-8114423 7 Asap FBtr0339300|FBtr0300954 8114284|8114284 8115265|8115265 CAGTATT 7mer-m8 dme-miR-8-3p 2R - 8114317 8114427 3'utr Asap FlyBase G15890.1 ACTCATTTTGTATACACGTTTCAGTATTTATTTAGCAAAACCTTAAAGCATATTGATATTATATGTAAGTCAAATAAACGGAAGAACATAACGCTTATTACATATATACAC 46 8114408 0.799174248 12 43 420 0.953846154 1.491361694 0.076923077 0.304347826 0.507692308 46 2 1 62 2R:8114317-8114427 7 24 1545 FBgn0050372 698.41 18.11666667 27.74 0.034363769 1.32474701 0.86517664 -29 2 -13.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2R 8114589 8114594 - 2R_8114589_8114594_- 0.998648184 0.998679002 0.998663593 2.18E-05 Asap FBtr0300954|FBtr0339300 8114284|8114284 8115265|8115265 2R - 8114567 8114617 3'utr Asap FlyBase G20956.1 AAAAAGAAGAGCAAAAGCCCTTTGTACCTAGAAGTTGTTACCAATTAAGTA 59 8114595 0.968369066 3 59 328 1 1.826074803 0.089552239 0.118644068 0.223880597 59 0 0 67 2R:8114567-8114617 6 Asap FBtr0339300|FBtr0300954 8114284|8114284 8115265|8115265 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2R - 8114568 8114614 3'utr Asap FlyBase G15891.1 AAGAAGAGCAAAAGCCCTTTGTACCTAGAAGTTGTTACCAATTAAGT 40 8114595 0.974265662 3 38 236 0.925925926 1.698970004 0.037037037 0.275 0.462962963 40 4 0 50 2R:8114568-8114614 6 49.5 1546 FBgn0050372 698.41 18.11666667 27.74 0.070875274 2.732290708 1.78442682 1 1 1 0.15 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 8114997 8115002 - 2R_8114997_8115002_- 0.464964844 0.550129042 0.507546943 0.060220183 Asap FBtr0300954|FBtr0339300 8114284|8114284 8115265|8115265 2R - 8114908 8115028 3'utr Asap FlyBase G20959.1 AATCAAAGCCTTTAAGTAGCGATCTTGCTGTGCATTTCCCGTTGGCTTCCTTCATAAGGTTAGCGCTTTAATAACTGAATATGTCCTGCAAATGCTGTAATTCGTACCATAACTAGATCTA 84 8115003 0.878334542 17 81 670 0.95959596 1.977723605 0.090909091 0.154761905 0.282828283 84 4 0 95 2R:8114908-8115028 6 Asap FBtr0339300|FBtr0300954 8114284|8114284 8115265|8115265 GCTGTG 6mer2-7 dme-miR-1008-3p 2R - 8114838 8115076 3'utr Asap FlyBase G15892.1 AAGTTACTCTTAGCTTAGAAGCCAACTACTCATTTACACTTGTATTTCAATCAAAGCCTTTAAGTAGCGATCTTGCTGTGCATTTCCCGTTGGCTTCCTTCATAAGGTTAGCGCTTTAATAACTGAATATGTCCTGCAAATGCTGTAATTCGTACCATAACTAGATCTAACTTTAACTTAGCCTAAAACGCTGTGCGCAAAAGTTACTCAATGTCAGAAGAATTGTCGGGAGATAAGCT 82 8115004 0.892757701 29 78 627 0.944 1.594760753 0.112 0.353658537 0.576 82 5 2 118 2R:8114838-8115076 6 39.5 1547 FBgn0050372 698.41 18.11666667 27.74 0.056557037 2.180312787 1.423936554 1 2 1.5 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT 2R 8129313 8129319 + 2R_8129313_8129319_+ 0.653920894 0.652159579 0.653040237 0.001245427 Socs44A FBtr0088784 8128794 8129476 2R + 8129254 8129335 3'utr Socs44A FlyBase G13846.3 ATTTTTGTATTCCTAACTTGGACACTAACTTTTTGCTAATCTAGATTGCATGGAATTTAGGCAGCTTTACGGCAATCGAATA 90 8129320 0.760770134 13 84 578 0.964912281 1.740362689 0.175438596 0.211111111 0.377192982 90 3 1 110 2R:8129254-8129335 7 Socs44A FBtr0088784 8128794 8129476 GGCAGCT 7mer-m8 dme-miR-980-3p 2R + 8129293 8129378 3'utr Socs44A FlyBase G10542.1 TCTAGATTGCATGGAATTTAGGCAGCTTTACGGCAATCGAATACGTTCAATGCCAATTACTCTTGTTGCAACGTGTATGTATTTTA 74 8129320 0.778587119 12 71 510 0.963636364 2.025305865 0.236363636 0.405405405 0.6 74 4 0 106 2R:8129293-8129378 7 71 1548 FBgn0033266 360.15 23.80333333 36.32666667 0.197140081 2.982775522 1.954487062 -7 -7 -7 0.15 dme-miR-1006-3p 7mer-A1 GAATTTA 2R 8134179 8134185 + 2R_8134179_8134185_+ 0.818978152 0.794373046 0.806675599 0.017398504 Pabp2 FBtr0088785 8133179 8134374 2R + 8134144 8134213 3'utr Pabp2 FlyBase G13857.1 ATATATAGAGTAAAGAGAAGATAAGAAAAGAAGTTGAATTTACTAAAGCGAAAAAGATGAAGACAAATAT 46 8134177 0.915174772 9 45 185 0.981132075 1.716003344 0.188679245 0.130434783 0.245283019 46 1 0 52 2R:8134144-8134213 7 Pabp2 FBtr0088785 8133179 8134374 GAATTTA 7mer-A1 dme-miR-1006-3p 2R + 8134145 8134205 3'utr Pabp2 FlyBase G10555.1 TATATAGAGTAAAGAGAAGATAAGAAAAGAAGTTGAATTTACTAAAGCGAAAAAGATGAAG 22 8134177 0.957730616 4 22 102 1 1.397940009 0.36 0.090909091 0.2 22 0 0 25 2R:8134145-8134205 7 25 1549 FBgn0005648 3045.73 202.1266667 313.4 0.008208213 0.123684818 0.079770262 2 2 2 0.15 dme-miR-999-3p 6mer3-8 AGTTAA 2R 8137090 8137095 - 2R_8137090_8137095_- 0.51490933 0.563334191 0.539121761 0.034241575 Lpin FBtr0303583|FBtr0303573|FBtr0303584|FBtr0113055 8136984|8136984|8136984|8136984 8137486|8137486|8137486|8137486 2R - 8137019 8137157 3'utr Lpin FlyBase G20993.1 AGACGGCGCATAGGAGTTGTGATTTTGATTTCATTATTTTTCGTATGTGATCATTTAAATTAAGTTAATTGTGATGAGGTTTTTATTTGAAGTTTTTATGAAAACTGTGCTCTAAACCTATGTATACTTAACTGATAGT 283 8137090 0.822479914 30 253 2521 0.91954023 1.359021943 0.227011494 0.173144876 0.327586207 283 15 13 320 2R:8137019-8137157 6 Lpin FBtr0303573|FBtr0113055|FBtr0303583|FBtr0303584 8136984|8136984|8136984|8136984 8137486|8137486|8137486|8137486 AGTTAA 6mer3-8 dme-miR-999-3p 2R - 8136985 8137157 3'utr Lpin FlyBase G15918.1 AGACGGCGCATAGGAGTTGTGATTTTGATTTCATTATTTTTCGTATGTGATCATTTAAATTAAGTTAATTGTGATGAGGTTTTTATTTGAAGTTTTTATGAAAACTGTGCTCTAAACCTATGTATACTTAACTGATAGTGTTTCAATACCAATAAATGCTTCAAATTCAAACA 189 8137090 0.98958929 31 169 1771 0.876865672 1.416825353 0.23880597 0.285714286 0.496268657 189 25 8 235 2R:8136985-8137157 6 82 1550 FBgn0263593 1170.44 33.67 51.33333333 0.070059123 2.435402435 1.597402597 -5 -5 -5 0.15 dme-miR-276a-3p 6mer2-7 GTTCCT 2R 8137196 8137201 - 2R_8137196_8137201_- 0.737810528 0.975754417 0.856782472 0.168251745 Lpin FBtr0303583|FBtr0303573|FBtr0303584|FBtr0113055 8136984|8136984|8136984|8136984 8137486|8137486|8137486|8137486 2R - 8137169 8137223 3'utr Lpin FlyBase G20993.2 TAATAGTGACTACTATAAGTATGTTCCTTTGAGACTCCCCGCAGGTTCGTAGATG 86 8137195 0.877702611 10 79 640 0.941176471 1.681241237 0.166666667 0.186046512 0.31372549 86 5 1 96 2R:8137169-8137223 6 Lpin FBtr0303573|FBtr0113055|FBtr0303583|FBtr0303584 8136984|8136984|8136984|8136984 8137486|8137486|8137486|8137486 GTTCCT 6mer2-7 dme-miR-276a-3p 2R - 8137159 8137219 3'utr Lpin FlyBase G15918.2 AGTGACTACTATAAGTATGTTCCTTTGAGACTCCCCGCAGGTTCGTAGATGATGCATATTC 64 8137195 0.774649765 9 60 456 0.913043478 1.447158031 0.076086957 0.34375 0.543478261 64 6 2 84 2R:8137159-8137219 6 67 1551 FBgn0263593 1170.44 33.67 51.33333333 0.05724343 1.98990199 1.305194805 -6 -6 -6 0.15 dme-miR-980-3p 6mer2-7 GCAGCT 2R 8138195 8138200 - 2R_8138195_8138200_- 0.990414179 0.994028722 0.99222145 0.002555837 Lpin FBtr0303577|FBtr0303585|FBtr0303575|FBtr0303578|FBtr0088815|FBtr0303574 8137986|8137986|8137986|8137986|8137986|8137986 8138234|8138234|8138234|8138234|8138234|8138234 2R - 8138189 8138220 3'utr Lpin FlyBase G21000.1 TAGCCCCAGTCGAAGGTTGTGCAGCTTGCAAA 5 8138203 0.718894525 3 5 21 1 0.698970004 0.2 0 0 5 0 0 5 2R:8138189-8138220 6 Lpin FBtr0303578|FBtr0303575|FBtr0088815|FBtr0303574|FBtr0303577|FBtr0303585 8137986|8137986|8137986|8137986|8137986|8137986 8138234|8138234|8138234|8138234|8138234|8138234 GCAGCT 6mer2-7 dme-miR-980-3p 2R - 8138188 8138225 3'utr Lpin FlyBase G15923.1 AGTCCTAGCCCCAGTCGAAGGTTGTGCAGCTTGCAAAT 11 8138194 0.956972445 4 11 55 1 1.113943352 0.076923077 0.181818182 0.307692308 11 0 0 13 2R:8138188-8138225 6 7.5 1552 FBgn0263593 1170.44 33.67 51.33333333 0.006407847 0.222750223 0.146103896 3 -6 -1.5 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 8225969 8225976 + 2R_8225969_8225976_+ 0.59589401 0.474157188 0.535025599 0.086080917 LRP1 FBtr0344893|FBtr0344894 8225414|8225414 8226438|8226438 2R + 8225850 8225998 3'utr LRP1 FlyBase G13939.1 ATTGCCCAAAAGCAGCCTAGTTAACATTTAAACGGAGGAATCATTCGAGCACTCACTAACAATTTGCCAATTAGTGAATGCGGGCGAAATCGAAATCGCCTCTTGAGATTGACCAAATATGCATTTAAATTAATTAAGTATTCACAAAG 70 8225953 0.774345923 19 69 441 0.987654321 1.903089987 0.086419753 0.157142857 0.271604938 70 1 0 80 2R:8225850-8225998 8 LRP1 FBtr0344893|FBtr0344894 8225414|8225414 8226438|8226438 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 8225850 8225990 3'utr LRP1 FlyBase G10604.1 ATTGCCCAAAAGCAGCCTAGTTAACATTTAAACGGAGGAATCATTCGAGCACTCACTAACAATTTGCCAATTAGTGAATGCGGGCGAAATCGAAATCGCCTCTTGAGATTGACCAAATATGCATTTAAATTAATTAAGTAT 47 8225953 0.909663925 14 45 257 0.958333333 1.838849091 0 0.446808511 0.638888889 47 3 0 69 2R:8225850-8225990 8 20 1553 FBgn0053087 1624.95 12.3 18.76333333 0.012308071 1.62601626 1.065908687 16 16 16 0.15 dme-miR-8-3p 7mer-m8 CAGTATT 2R 8239941 8239947 + 2R_8239941_8239947_+ 0.661508224 0.661509002 0.661508613 5.66E-07 pnut FBtr0088793|FBtr0088792 8239675|8239675 8240297|8240297 2R + 8239918 8239961 3'utr pnut FlyBase G13949.1 GTACATATAACACATAGCAGTTGCAGTATTTTACCAATATATAT 38 8239938 0.820954135 4 38 304 1 1.62324929 0 0.105263158 0.19047619 38 0 0 42 2R:8239918-8239961 7 pnut FBtr0088793|FBtr0088792 8239675|8239675 8240297|8240297 CAGTATT 7mer-m8 dme-miR-8-3p 2R + 8239920 8239984 3'utr pnut FlyBase G10615.1 ACATATAACACATAGCAGTTGCAGTATTTTACCAATATATATCCACGCATTACTTGACGAAACAC 25 8239938 0.934903954 7 24 174 1 1.505149978 0 0.24 0.40625 25 0 0 32 2R:8239920-8239984 7 29.5 1554 FBgn0013726 2422.526667 120.4666667 184.8733333 0.012177369 0.244881018 0.159568714 3 3 3 0.15 dme-miR-1006-3p 7mer-A1 GAATTTA 2R 8597565 8597571 - 2R_8597565_8597571_- 0.771905418 0.82334029 0.797622854 0.036369967 CG8735 FBtr0339357|FBtr0088730 8596970|8597526 8597686|8597686 2R - 8597550 8597598 3'utr CG8735 FlyBase G21027.1 ATTTGAAAAAGAATCATCTGTTATCATGAATTTATTGTCGAAAAAAAAA 7 8597564 0.9807775 5 7 53 1 0.84509804 0.142857143 0 0 7 0 0 7 2R:8597550-8597598 7 CG8735 FBtr0339357|FBtr0088730 8596970|8597526 8597686|8597686 GAATTTA 7mer-A1 dme-miR-1006-3p 2R - 8597559 8597592 3'utr CG8735 FlyBase G15940.1 AAAAGAATCATCTGTTATCATGAATTTATTGTCG 7 8597572 0.664854065 4 5 66 0.818181818 0.954242509 0.454545455 0.428571429 0.636363636 7 2 0 9 2R:8597559-8597592 7 7 1555 FBgn0033309 330.0133333 24.15666667 37.01 0.021211264 0.289775079 0.189138071 -7 1 -3 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 8610969 8610976 + 2R_8610969_8610976_+ 0.495564163 0.496061119 0.495812641 0.000351361 rgr FBtr0088692|FBtr0339354 8610887|8610887 8611238|8612295 2R + 8610942 8610995 3'utr rgr FlyBase G13976.1 ATCGTAGGGCGTTAGATGTGTGTCCGTGTACTTAAAGTTATTTTGCCGTCTAGC 100 8610968 0.815166114 6 97 859 0.975 2.068185862 0.058333333 0.18 0.316666667 100 3 0 117 2R:8610942-8610995 8 rgr FBtr0088692|FBtr0339354 8610887|8610887 8611238|8612295 GTACTTAA 8mer-A1 dme-miR-252-5p 2R + 8610933 8611007 3'utr rgr FlyBase G10633.1 TACAAAGCAATCGTAGGGCGTTAGATGTGTGTCCGTGTACTTAAAGTTATTTTGCCGTCTAGCATATACCAATCA 91 8610968 0.951277547 8 87 756 0.957142857 2.127104798 0.035714286 0.384615385 0.6 91 6 0 134 2R:8610933-8611007 8 94 1556 FBgn0267792 576.07 20.24333333 30.99 0.163174614 4.643504034 3.033236528 1 1 1 0.15 dme-miR-184-5p 7mer-A1 GATAAGA 2R 8619784 8619790 + 2R_8619784_8619790_+ 0.59406841 0.670852019 0.632460214 0.054294204 Cirl FBtr0310449|FBtr0310450|FBtr0305080 8619651|8619651|8619651 8620151|8620151|8620151 2R + 8619704 8619859 3'utr Cirl FlyBase G13981.1 ATTTATGACCGAGAGACACATGTGATATAATGCTTAAGTAACTTAAATTGTTAATGAACCTCTCTCTGGCAGGATTCAAAGATAAGACTCAAAAGCTGTGCTGGGCAGCGATGATCACTGTTGCGTCCCAGTAACAGCTTGCACGCGAAGACTCCC 90 8619786 0.975465263 18 73 460 0.8125 1.356981401 0.232142857 0.2 0.357142857 90 18 3 91 2R:8619704-8619859 7 Cirl FBtr0305080|FBtr0310449|FBtr0310450 8619651|8619651|8619651 8620151|8620151|8620151 GATAAGA 7mer-A1 dme-miR-184-5p 2R + 8619754 8619813 3'utr Cirl FlyBase G10638.1 TTAATGAACCTCTCTCTGGCAGGATTCAAAGATAAGACTCAAAAGCTGTGCTGGGCAGCG 37 8619786 0.927644349 7 19 160 0.517857143 1.161368002 0.357142857 0.405405405 0.607142857 37 26 1 29 2R:8619754-8619813 7 39 1557 FBgn0033313 1194.753333 23.36 35.54 0.032642721 1.669520548 1.097355093 -2 -2 -2 0.15 dme-miR-263a-5p 7mer-m1 TGCCATT 2R 8623885 8623891 + 2R_8623885_8623891_+ 0.764002674 0.758121581 0.761062128 0.004158566 Cirl FBtr0290112|FBtr0305082|FBtr0305081|FBtr0301363|FBtr0310448 8623506|8623506|8623506|8623506|8623506 8625203|8625203|8625203|8624135|8625203 2R + 8623774 8623926 3'utr Cirl FlyBase G13988.1 TTGGAATCGGGCCCTTCGACTTGCATGCATTTTATACCAACTTGGAAATCGATATTAAATATAAATGTATGTACCATATATGTATGATGTATTGTAATACATGTCACCACATGCCATTTTTAAATACTTAAAAACTAATTTAAACAACCAGAA 25 8623885 0.988257074 12 21 191 0.9 1.431363764 0.166666667 0.2 0.333333333 25 3 0 27 2R:8623774-8623926 7 Cirl FBtr0305081|FBtr0301363|FBtr0310448|FBtr0290112|FBtr0305082 8623506|8623506|8623506|8623506|8623506 8625203|8624135|8625203|8625203|8625203 TGCCATT 7mer-m1 dme-miR-263a-5p 2R + 8623844 8623897 3'utr Cirl FlyBase G10644.1 GTACCATATATGTATGATGTATTGTAATACATGTCACCACATGCCATTTTTAAA 8 8623885 0.956786802 4 8 63 1 1.079181246 0.083333333 0.375 0.583333333 8 0 0 12 2R:8623844-8623897 7 7 1558 FBgn0033313 1194.753333 23.36 35.54 0.00585895 0.299657534 0.196961171 0 0 0 0.15 dme-miR-276a-3p 7mer-m8 AGTTCCT 2R 8664347 8664353 + 2R_8664347_8664353_+ 0.625064959 0.63148274 0.62827385 0.004537999 ptc FBtr0089427 8664335 8665223 2R + 8664303 8664392 stop_codon ptc FlyBase G14009.1 CAGGGCGGTGCGCAGCTATAACTTTACGAGTTAGCACTAGCACTAGTTCCTGTAGCTATTAGGACGTATCTTTAGACTCTAGCCTAAGCC 21 8664346 0.944785391 8 19 150 0.913043478 1.021189299 0.217391304 0.095238095 0.173913043 21 1 1 21 2R:8664303-8664392 7 ptc FBtr0089427 8664335 8665223 AGTTCCT 7mer-m8 dme-miR-276a-3p 2R + 8664334 8664385 stop_codon ptc FlyBase G10662.1 TAGCACTAGCACTAGTTCCTGTAGCTATTAGGACGTATCTTTAGACTCTAGC 10 8664346 0.955614806 6 10 78 1 1.301029996 0.05 0.6 0.8 10 0 0 20 2R:8664334-8664385 7 11 1559 FBgn0003892 243 5.353333333 8.3 0.04526749 2.054794521 1.325301205 1 1 1 0.15 dme-miR-252-5p 7mer-m8 GTACTTA 2R 8664859 8664865 + 2R_8664859_8664865_+ 0.58331369 0.580358692 0.581836191 0.002089501 ptc FBtr0089427 8664335 8665223 2R + 8664831 8664872 3'utr ptc FlyBase G14011.1 ATTGTAACACACGCAAAACACACACAATGTACTTACATATAA 27 8664858 0.96645889 3 23 117 0.882352941 1.176091259 0 0.185185185 0.352941176 27 3 1 30 2R:8664831-8664872 7 ptc FBtr0089427 8664335 8665223 GTACTTA 7mer-m8 dme-miR-252-5p 2R + 8664811 8664872 3'utr ptc FlyBase G10663.1 ACTTAAACTTAGAGATATTTATTGTAACACACGCAAAACACACACAATGTACTTACATATAA 18 8664858 0.965700495 3 18 87 1 1.477121255 0 0.5 0.7 18 0 0 30 2R:8664811-8664872 7 21 1560 FBgn0003892 243 5.353333333 8.3 0.086419753 3.922789539 2.530120482 1 1 1 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 8664971 8664976 + 2R_8664971_8664976_+ 0.999914331 0.792380227 0.896147279 0.146748769 ptc FBtr0089427 8664335 8665223 2R + 8664946 8664989 3'utr ptc FlyBase G14012.1 ATGTACATAAAACACAAGGACTTGAACCAAAATAGTATCGCTTA 26 8664978 0.842737215 3 22 125 0.862068966 0.795880017 0.068965517 0.115384615 0.206896552 26 1 3 25 2R:8664946-8664989 6 ptc FBtr0089427 8664335 8665223 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 8664954 8664990 3'utr ptc FlyBase G10665.1 AAAACACAAGGACTTGAACCAAAATAGTATCGCTTAA 9 8664978 0.942361114 3 9 40 1 1.079181246 0.083333333 0.222222222 0.416666667 9 0 0 12 2R:8664954-8664990 6 16.5 1561 FBgn0003892 243 5.353333333 8.3 0.067901235 3.082191781 1.987951807 -7 -7 -7 0.15 dme-miR-2a-2-5p 8mer-A1 TGATGAGA 2R 8682043 8682050 + 2R_8682043_8682050_+ 0.59907018 0.580539331 0.589804755 0.013103325 Acsl FBtr0088700|FBtr0100430|FBtr0088701|FBtr0088699|FBtr0100428|FBtr0333001|FBtr0100431|FBtr0100427|FBtr0100429|FBtr0100426 8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604 8682791|8682791|8682339|8682791|8682791|8682339|8682791|8683022|8682791|8682791 2R + 8681950 8682166 3'utr Acsl FlyBase G14034.1 AAGCTGAGTTTGGTTTGGAAATGCGCTGTGTATGTGCTAGGAATGCTGTTCAACCGATTGACAATGATAATGGTAATGATAACTGAATGCCGATGATGAGAAGGAATATTGTATACTGTACAGTTTTCGGTTTATAGTACATTGTGTGGCAAATTTATATTGCAGAAAAATACTTATTTTTATATTAAGCTTAAGTGGTTGCCTATTAATTATGTAC 102 8682043 0.903087221 28 93 704 0.912 1.45484486 0.208 0.225490196 0.368 102 8 3 114 2R:8681950-8682166 8 Acsl FBtr0100428|FBtr0333001|FBtr0100427|FBtr0100431|FBtr0100426|FBtr0100429|FBtr0088700|FBtr0100430|FBtr0088701|FBtr0088699 8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604 8682791|8682339|8683022|8682791|8682791|8682791|8682791|8682791|8682339|8682791 TGATGAGA 8mer-A1 dme-miR-2a-2-5p 2R + 8681891 8682101 3'utr Acsl FlyBase G10682.1 ATTACTCGTTTCTCATTTTAATAAAGTTCGCAAAGACTTGCTTGGCAGATATGTAGCTGAAGCTGAGTTTGGTTTGGAAATGCGCTGTGTATGTGCTAGGAATGCTGTTCAACCGATTGACAATGATAATGGTAATGATAACTGAATGCCGATGATGAGAAGGAATATTGTATACTGTACAGTTTTCGGTTTATAGTACATTGTGTGGCAA 71 8682013 0.978200447 27 71 477 1 2.025305865 0.320754717 0.281690141 0.518867925 71 0 0 106 2R:8681891-8682101 8 21 1562 FBgn0263120 3324.373333 107.4633333 164.07 0.00631698 0.195415491 0.127994149 0 30 15 0.15 dme-miR-14-3p 6mer3-8 AAGACT 2R 8682571 8682576 + 2R_8682571_8682576_+ 0.943625447 0.541201519 0.742413483 0.284556669 Acsl FBtr0088700|FBtr0100430|FBtr0088699|FBtr0100428|FBtr0100431|FBtr0100427|FBtr0100429|FBtr0100426 8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604 8682791|8682791|8682791|8682791|8682791|8683022|8682791|8682791 2R + 8682532 8682608 3'utr Acsl FlyBase G14038.1 ACGTAAAGAGAAAAGTCAAAATTAATATGCAACAAATGAAAGACTTAGTACCAAAATATAATAAAAACACTGAAATC 20 8682568 0.942696423 6 19 80 0.952380952 1.301029996 0 0.05 0.095238095 20 1 0 20 2R:8682532-8682608 6 Acsl FBtr0100428|FBtr0100427|FBtr0100431|FBtr0100426|FBtr0100429|FBtr0088700|FBtr0100430|FBtr0088699 8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604 8682791|8683022|8682791|8682791|8682791|8682791|8682791|8682791 AAGACT 6mer3-8 dme-miR-14-3p 2R + 8682538 8682589 3'utr Acsl FlyBase G10685.1 AGAGAAAAGTCAAAATTAATATGCAACAAATGAAAGACTTAGTACCAAAATA 7 8682568 0.989847246 2 6 29 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 2R:8682538-8682589 6 9.5 1563 FBgn0263120 3324.373333 107.4633333 164.07 0.002857681 0.088402246 0.057902115 3 3 3 0.15 dme-miR-283-5p 6mer2-7 GATATT 2R 8718040 8718045 - 2R_8718040_8718045_- 0.683503785 0.917984173 0.800743979 0.165802681 CG14767 FBtr0088719|FBtr0088720|FBtr0088718 8718015|8718015|8718015 8718693|8718693|8718693 2R - 8718021 8718126 3'utr CG14767 FlyBase G21051.1 AATTATGATGATATTACCAGCAACAGTAAAGTTTTATGTGTGTACAATATCTAAATGTATACTGTGTACTAAATATGCAAAGATATTCGAATAAAAATTAGTTTAT 18 8718063 0.981216166 12 16 131 0.888888889 1.204119983 0.111111111 0 0 18 2 0 16 2R:8718021-8718126 6 CG14767 FBtr0088718|FBtr0088720|FBtr0088719 8718015|8718015|8718015 8718693|8718693|8718693 GATATT 6mer2-7 dme-miR-283-5p 2R - 8718028 8718074 3'utr CG14767 FlyBase G15957.1 AAATGTATACTGTGTACTAAATATGCAAAGATATTCGAATAAAAATT 9 8718061 0.988122105 7 8 67 0.857142857 1.079181246 0.142857143 0.555555556 0.714285714 9 2 0 12 2R:8718028-8718074 6 4 1564 FBgn0040777 1544.016667 90.17333333 137.3633333 0.002590646 0.044359012 0.029119852 18 16 17 0.15 dme-miR-11-3p 7mer-m1 TGTGATG 2R 8718382 8718388 - 2R_8718382_8718388_- 0.612053744 0.612063808 0.612058776 7.14E-06 CG14767 FBtr0088719|FBtr0088720|FBtr0088718 8718015|8718015|8718015 8718693|8718693|8718693 2R - 8718357 8718411 3'utr CG14767 FlyBase G21054.1 AAGCATTAAAGCCAAAAACATATTGTGATGCTGGCGAGGAAAGCATCAATTCCTT 27 8718389 0.962657695 7 26 131 0.96969697 1.204119983 0 0.185185185 0.333333333 27 0 1 32 2R:8718357-8718411 7 CG14767 FBtr0088718|FBtr0088720|FBtr0088719 8718015|8718015|8718015 8718693|8718693|8718693 TGTGATG 7mer-m1 dme-miR-11-3p 2R - 8718314 8718403 3'utr CG14767 FlyBase G15959.1 AAGCCAAAAACATATTGTGATGCTGGCGAGGAAAGCATCAATTCCTTTTCGGCCGCATCTGACCCGATTTTAGCTGCAACAATCTGTTAG 18 8718389 0.969018511 8 18 100 1 1.380211242 0 0.277777778 0.458333333 18 0 0 24 2R:8718314-8718403 7 17.5 1565 FBgn0040777 1544.016667 90.17333333 137.3633333 0.011334075 0.194070679 0.127399355 1 1 1 0.15 dme-miR-980-3p 7mer-A1 GCAGCTA 2R 8718575 8718581 - 2R_8718575_8718581_- 0.823300382 0.822017202 0.822658792 0.000907359 CG14767 FBtr0088719|FBtr0088720|FBtr0088718 8718015|8718015|8718015 8718693|8718693|8718693 2R - 8718504 8718839 stop_codon CG14767 FlyBase G21056.1 TTGATGTAATCGGTGGCATTCCGCCTCCTCCGCCCTACAACGACGTTGCCGATGCCCAGGTGCAAGTGCCATCGCAATCGCCGCTGCATCGCCAGCCAAACATCCCGGGACAAGTATTCGGCGGACGCGACGAAAGCCAGGCTTAAACAGTACTTTCGACTGGATTGCTTCTCATGGCGAGTGGGTTGTGATCAGCGGTGACCACCCCTCTCCCATCCTCTTCTTGCCCAGATGATCTGGTTTCTGGTCCCTCATTTCGCAGCTATCATTCCCAGGCACACATACACCTTCTTAATGGTTGCTTCAATGTATTGAACACTGTTTTTAGAAAAACGA 272 8718598 0.999953233 54 254 2070 0.943396226 2 0.257861635 0.139705882 0.264150943 272 16 2 300 2R:8718504-8718839 7 CG14767 FBtr0088718|FBtr0088720|FBtr0088719 8718015|8718015|8718015 8718693|8718693|8718693 GCAGCTA 7mer-A1 dme-miR-980-3p 2R - 8718535 8718695 stop_codon CG14767 FlyBase G15961.1 AAACAGTACTTTCGACTGGATTGCTTCTCATGGCGAGTGGGTTGTGATCAGCGGTGACCACCCCTCTCCCATCCTCTTCTTGCCCAGATGATCTGGTTTCTGGTCCCTCATTTCGCAGCTATCATTCCCAGGCACACATACACCTTCTTAATGGTTGCTTC 149 8718598 0.984723318 28 135 1184 0.92173913 1.72427587 0.256521739 0.375838926 0.595652174 149 15 3 212 2R:8718535-8718695 7 48 1566 FBgn0040777 1544.016667 90.17333333 137.3633333 0.031087747 0.532308147 0.34943823 17 17 17 0.15 dme-miR-252-5p 6mer3-8 GTACTT 2R 8729550 8729555 - 2R_8729550_8729555_- 0.999937308 0.999991877 0.999964593 3.86E-05 stmA FBtr0339341|FBtr0088715|FBtr0088716|FBtr0301639 8729500|8729500|8729500|8729500 8729726|8729726|8729726|8729726 2R - 8729539 8729575 3'utr stmA FlyBase G21064.1 TGTTAAACGACCCCGAATATGTACTTTGATTTAATTG 9 8729556 0.978764051 5 9 61 1 1.079181246 0 0.222222222 0.416666667 9 0 0 12 2R:8729539-8729575 6 stmA FBtr0339341|FBtr0088715|FBtr0088716|FBtr0301639 8729500|8729500|8729500|8729500 8729726|8729726|8729726|8729726 GTACTT 6mer3-8 dme-miR-252-5p 2R - 8729532 8729571 3'utr stmA FlyBase G15970.1 AAACGACCCCGAATATGTACTTTGATTTAATTGTTAGACA 11 8729557 0.977096948 5 10 72 0.933333333 1.146128036 0.066666667 0.181818182 0.4 11 1 0 14 2R:8729532-8729571 6 10 1567 FBgn0086784 383.3333333 16.82 25.63666667 0.026086957 0.594530321 0.390066311 1 2 1.5 0.15 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 8888480 8888486 - 2R_8888480_8888486_- 0.823215604 0.822899607 0.823057605 0.000223446 CG8272 FBtr0088686|FBtr0330246 8888402|8888402 8889036|8888973 2R - 8888433 8888532 3'utr CG8272 FlyBase G21079.1 AACACATTGTGGTTATAATTACAACAAGTCACTGTCACTTCTTATAAGCTTTATACGATTAAATCGTTAACTGAACTCAACTGACTTAAGTGGTTAATGT 43 8888488 0.989829548 8 40 394 0.9 1.653212514 0.02 0.139534884 0.26 43 5 0 45 2R:8888433-8888532 7 CG8272 FBtr0088686|FBtr0330246 8888402|8888402 8889036|8888973 AGCTTTA 7mer-A1 dme-miR-79-3p 2R - 8888434 8888514 3'utr CG8272 FlyBase G15981.1 TTACAACAAGTCACTGTCACTTCTTATAAGCTTTATACGATTAAATCGTTAACTGAACTCAACTGACTTAAGTGGTTAATG 23 8888488 0.974498895 8 22 194 0.966666667 1.462397998 0.033333333 0.260869565 0.433333333 23 1 0 29 2R:8888434-8888514 7 23 1568 FBgn0033337 113.6666667 4.916666667 7.516666667 0.202346041 4.677966102 3.059866962 2 2 2 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2R 8888664 8888669 - 2R_8888664_8888669_- 0.730949445 0.730949404 0.730949424 0 CG8272 FBtr0088686|FBtr0088686|FBtr0088686|FBtr0330246|FBtr0330246|FBtr0330246 8888402|8888402|8888402|8888402|8888402|8888402 8889036|8889036|8889036|8888973|8888973|8888973 2R - 8888634 8888681 3'utr CG8272 FlyBase G21080.1 GATTGTAAATTATGTGATCGGTTGCCAAAATTAAAGTTGTTTGTTTGA 7 8888671 0.990116859 5 6 62 0.7 0.84509804 0.4 0.285714286 0.5 7 3 0 7 2R:8888634-8888681 6 CG8272 FBtr0088686|FBtr0088686|FBtr0088686|FBtr0330246|FBtr0330246|FBtr0330246 8888402|8888402|8888402|8888402|8888402|8888402 8889036|8889036|8889036|8888973|8888973|8888973 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 8888635 8888685 3'utr CG8272 FlyBase G15982.1 ACACGATTGTAAATTATGTGATCGGTTGCCAAAATTAAAGTTGTTTGTTTG 9 8888659 0.882667273 3 9 76 1 1.113943352 0.384615385 0.444444444 0.615384615 9 0 0 13 2R:8888635-8888685 6 8 1569 FBgn0033337 113.6666667 4.916666667 7.516666667 0.070381232 1.627118644 1.064301552 2 -10 -4 0.15 dme-miR-308-3p 8mer-m1 CTGTGATT 2R 8888717 8888724 - 2R_8888717_8888724_- 0.352402918 0.384993321 0.368698119 0.023044893 CG8272 FBtr0088686|FBtr0330246 8888402|8888402 8889036|8888973 2R - 8888683 8888747 3'utr CG8272 FlyBase G21081.1 ACGTAACGTTTGTCCGCATTCAACTGTGATTTTTTGTAAGGTACGAATCGTATGATAAGTGTACA 21 8888716 0.991413066 7 20 214 0.964285714 1.431363764 0.214285714 0.19047619 0.392857143 21 1 0 27 2R:8888683-8888747 8 CG8272 FBtr0088686|FBtr0330246 8888402|8888402 8889036|8888973 CTGTGATT 8mer-m1 dme-miR-308-3p 2R - 8888706 8888745 3'utr CG8272 FlyBase G15983.1 GTAACGTTTGTCCGCATTCAACTGTGATTTTTTGTAAGGT 13 8888716 0.596723692 6 12 139 0.823529412 1.146128036 0.529411765 0.153846154 0.352941176 13 3 0 14 2R:8888706-8888745 8 17 1570 FBgn0033337 113.6666667 4.916666667 7.516666667 0.149560117 3.457627119 2.261640798 -8 -8 -8 0.15 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 8888883 8888889 - 2R_8888883_8888889_- 0.48532837 0.543077586 0.514202978 0.040834851 CG8272 FBtr0088686|FBtr0330246 8888402|8888402 8889036|8888973 2R - 8888835 8888920 3'utr CG8272 FlyBase G21082.1 CGGCCCCCAGCAGCTGGGCTATAGTTGTGAAAGCTTTAGTCAAATATACATACATATACATATATATGCAGACATATATGTATTTG 34 8888896 0.974902213 7 33 272 0.925 1.568201724 0.175 0.147058824 0.275 34 3 0 37 2R:8888835-8888920 7 CG8272 FBtr0088686|FBtr0330246 8888402|8888402 8889036|8888973 AGCTTTA 7mer-A1 dme-miR-79-3p 2R - 8888873 8888911 3'utr CG8272 FlyBase G15984.2 GCAGCTGGGCTATAGTTGTGAAAGCTTTAGTCAAATATA 17 8888886 0.715333809 6 16 126 0.892857143 0.795880017 0.142857143 0.470588235 0.678571429 17 0 3 25 2R:8888873-8888911 7 22 1571 FBgn0033337 113.6666667 4.916666667 7.516666667 0.193548387 4.474576271 2.926829268 7 -3 2 0.15 dme-miR-970-3p 6mer3-8 TCTTAT 2R 8898620 8898625 + 2R_8898620_8898625_+ 0.999798499 0.965993299 0.982895899 0.023903886 Sec31 FBtr0088643|FBtr0345224|FBtr0339302|FBtr0088642 8898576|8898576|8898576|8898576 8898798|8898798|8898798|8898798 2R + 8898561 8898654 stop_codon Sec31 FlyBase G14093.1 AGTTGGTTCTGCGTTAGAGCCCCGTCGCCGGATCGCAGCCAAGTTCACTAAACGTATATTCTTATTGTGTCTTCAGATATCGATGTCAAACACA 12 8898604 0.964490998 7 12 66 1 1.176091259 0.333333333 0.25 0.4 12 0 0 15 2R:8898561-8898654 6 Sec31 FBtr0088642|FBtr0339302|FBtr0345224|FBtr0088643 8898576|8898576|8898576|8898576 8898798|8898798|8898798|8898798 TCTTAT 6mer3-8 dme-miR-970-3p 2R + 8898577 8898657 3'utr Sec31 FlyBase G10729.1 GAGCCCCGTCGCCGGATCGCAGCCAAGTTCACTAAACGTATATTCTTATTGTGTCTTCAGATATCGATGTCAAACACAAAA 11 8898619 0.985314224 6 10 84 0.882352941 1.176091259 0.117647059 0.363636364 0.588235294 11 2 0 15 2R:8898577-8898657 6 4.5 1572 FBgn0033339 1910.493333 56.05666667 85.60333333 0.002355413 0.080275911 0.052568046 16 1 8.5 0.15 dme-miR-79-3p 6mer3-8 TAGCTT 2R 8902618 8902623 + 2R_8902618_8902623_+ 0.999998113 0.998659306 0.999328709 0.000946675 Ggamma1 FBtr0088645|FBtr0088647|FBtr0088646 8902559|8902559|8902559 8904791|8903130|8903130 2R + 8902559 8902708 stop_codon Ggamma1 FlyBase G14098.1 AAGGAGGCGGTGAGGATGGTCCGCCGTTGCCGAGGAGTCAGCGATCGCCGGCGGACGTTTAGCTTATTTTTAGTTTAGCAAGATGGATTAGGACGCAAACGTGTGTGGAGTACTACCCCAGTACCAGTATCAACGCCACCTGGAACAATA 38 8902643 0.854266942 17 35 211 0.958333333 1.662757832 0.291666667 0.157894737 0.333333333 38 2 0 46 2R:8902559-8902708 6 Ggamma1 FBtr0088646|FBtr0088647|FBtr0088645 8902559|8902559|8902559 8903130|8903130|8904791 TAGCTT 6mer3-8 dme-miR-79-3p 2R + 8902523 8902685 stop_codon Ggamma1 FlyBase G10733.1 ATCCCTTCCGCGAGAAGTCGTCCTGCACCGTTCTCTAAGGAGGCGGTGAGGATGGTCCGCCGTTGCCGAGGAGTCAGCGATCGCCGGCGGACGTTTAGCTTATTTTTAGTTTAGCAAGATGGATTAGGACGCAAACGTGTGTGGAGTACTACCCCAGTACCAG 23 8902644 0.969230001 14 21 118 0.825 0.740362689 0.225 0.391304348 0.65 23 2 5 33 2R:8902523-8902685 6 7.5 1573 FBgn0004921 4069.183333 548.5766667 837.3966667 0.001843122 0.013671744 0.008956329 -25 -26 -25.5 0.15 dme-miR-2b-2-5p 6mer2-7 TGAAGA 2R 8917772 8917777 + 2R_8917772_8917777_+ 0.970400396 0.805407417 0.887903906 0.116667669 lin FBtr0088651 8917676 8918234 2R + 8917743 8917912 3'utr lin FlyBase G14117.1 GGAATAGGAGAAACTAGCGCAAAATTCGATGAAGATGGAGGCCTTGTAGAATACGTGTATTAGCCGTAGGGACCAACCACTCCGACCATAACTCCGCACCCCGATCCAGTAGCGCGTCAACCGTAGTTAAGATCTTGCACCCTCTTCATCCGCTTCGCCCAGCAGGTCTT 34 8917778 0.965411869 16 33 165 0.973684211 1.267171728 0.131578947 0.117647059 0.210526316 34 0 1 37 2R:8917743-8917912 6 lin FBtr0088651 8917676 8918234 TGAAGA 6mer2-7 dme-miR-2b-2-5p 2R + 8917742 8917840 3'utr lin FlyBase G10749.1 TGGAATAGGAGAAACTAGCGCAAAATTCGATGAAGATGGAGGCCTTGTAGAATACGTGTATTAGCCGTAGGGACCAACCACTCCGACCATAACTCCGCA 20 8917778 0.932843332 9 20 73 1 1.531478917 0.323529412 0.5 0.705882353 20 0 0 34 2R:8917742-8917840 6 16.5 1574 FBgn0002552 347.3366667 11.45666667 17.51666667 0.047504343 1.440209485 0.941960038 -6 -6 -6 0.15 dme-miR-1008-3p 6mer3-8 AGCTGT 2R 8917932 8917937 + 2R_8917932_8917937_+ 0.999999879 1 0.99999994 7.07E-08 lin FBtr0088651 8917676 8918234 2R + 8917920 8917962 3'utr lin FlyBase G14118.1 AGATACATACCCAGCTGTATGTAATTGTCATTGTAATTGTAAT 7 8917945 0.987816192 5 6 54 0.888888889 0.602059991 0 0.142857143 0.333333333 7 0 1 8 2R:8917920-8917962 6 lin FBtr0088651 8917676 8918234 AGCTGT 6mer3-8 dme-miR-1008-3p 2R + 8917919 8917970 3'utr lin FlyBase G10750.1 CAGATACATACCCAGCTGTATGTAATTGTCATTGTAATTGTAATGAGCATCA 6 8917944 0.982332006 4 6 47 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 2R:8917919-8917970 6 3.5 1575 FBgn0002552 347.3366667 11.45666667 17.51666667 0.010076679 0.305498982 0.199809705 -13 -12 -12.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 8948437 8948443 - 2R_8948437_8948443_- 0.746178526 0.74694482 0.746561673 0.000541856 CG33199 FBtr0307344|FBtr0307344|FBtr0307344|FBtr0088688|FBtr0088688|FBtr0088688 8947679|8947679|8947679|8948111|8948111|8948111 8948752|8948752|8948752|8948752|8948752|8948752 2R - 8948365 8948623 3'utr CG33199 FlyBase G21151.1 TTGCCTAAGTTAAGTCACCCACTCACCACAGACCCAAGCGGAACTCGGACATGGAGGCTTGTTTTGTAATATTCTGTTCGATAAACTAACTGATCGGAGGCGAGGATCTGTGCGCATATATAGATATATTTTCTTGTTTACACATGCACACCATGCGTCGCCAACTAAAAGGAATAAATTTGTGATAAATCGTGTATGAAAAAAGCCCATCGGCAGACAAACTGAACGAAGGAGCGATGGAGGAGAAGATTCGCTGAGC 327 8948445 0.974889446 26 311 1938 0.957178841 1.625541087 0.173803526 0.171253823 0.317380353 327 9 8 380 2R:8948365-8948623 7 CG33199 FBtr0088688|FBtr0088688|FBtr0088688|FBtr0307344|FBtr0307344|FBtr0307344 8948111|8948111|8948111|8947679|8947679|8947679 8948752|8948752|8948752|8948752|8948752|8948752 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 8948357 8948594 3'utr CG33199 FlyBase G16033.1 AGACCCAAGCGGAACTCGGACATGGAGGCTTGTTTTGTAATATTCTGTTCGATAAACTAACTGATCGGAGGCGAGGATCTGTGCGCATATATAGATATATTTTCTTGTTTACACATGCACACCATGCGTCGCCAACTAAAAGGAATAAATTTGTGATAAATCGTGTATGAAAAAAGCCCATCGGCAGACAAACTGAACGAAGGAGCGATGGAGGAGAAGATTCGCTGAGCTTGCGGGA 273 8948445 0.999965586 23 265 1650 0.973614776 2.089905111 0.232189974 0.32967033 0.517150396 273 8 2 369 2R:8948357-8948594 7 228 1576 FBgn0053199 249.6866667 28.21 43.29 0.913144474 8.08224034 5.266805267 2 2 2 0.15 dme-miR-14-3p 8mer-A1 AAGACTGA 2R 8960983 8960990 + 2R_8960983_8960990_+ 0.643487464 0.643551142 0.643519303 4.50E-05 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 2R + 8960954 8961011 3'utr babo FlyBase G14181.1 TAACGAAAACAAAACAGTAAGACTATGTCAAGACTGAGCAGCAGTGGAAAGCAGTGAG 85 8960980 0.960788884 6 66 330 0.777777778 1.886490725 0.515151515 0.152941176 0.272727273 85 22 0 77 2R:8960954-8961011 8 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 AAGACTGA 8mer-A1 dme-miR-14-3p 2R + 8960958 8961007 3'utr babo FlyBase G10788.1 GAAAACAAAACAGTAAGACTATGTCAAGACTGAGCAGCAGTGGAAAGCAG 55 8960980 0.898445185 5 41 207 0.7625 1.30820858 0.6375 0.345454545 0.55 55 17 2 61 2R:8960958-8961007 8 64.5 1577 FBgn0011300 981.73 24.67666667 37.73 0.065700345 2.613805214 1.709514975 3 3 3 0.15 dme-miR-305-3p 6mer2-7 TGTGCC 2R 8961243 8961248 + 2R_8961243_8961248_+ 0.93106797 0.949068044 0.940068007 0.012727922 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 2R + 8961181 8961281 3'utr babo FlyBase G14182.1 ACGATTTGGCGCGCCGCCTGCTCACGAACAGCTTGCCATGCCCACGTCGCTATTGCTGCTGCTGTGCCTCTAAAACTTAATGAACACCACCCCTCTCCCAT 38 8961242 0.787956745 14 30 224 0.854166667 1.612783857 0.270833333 0.236842105 0.395833333 38 7 0 41 2R:8961181-8961281 6 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 TGTGCC 6mer2-7 dme-miR-305-3p 2R + 8961145 8961263 3'utr babo FlyBase G10789.1 AAATCGTAACGTAAAAAATAAAATGAAAGGAATCAAACGATTTGGCGCGCCGCCTGCTCACGAACAGCTTGCCATGCCCACGTCGCTATTGCTGCTGCTGTGCCTCTAAAACTTAATGA 25 8961243 0.976870605 12 24 156 0.96875 1.491361694 0.28125 0.28 0.4375 25 1 0 31 2R:8961145-8961263 6 17.5 1578 FBgn0011300 981.73 24.67666667 37.73 0.017825675 0.709171957 0.463821892 1 0 0.5 0.15 dme-miR-277-3p 6mer3-8 TGCATT 2R 8962154 8962159 + 2R_8962154_8962159_+ 0.99877768 0.999997719 0.9993877 0.00086267 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 2R + 8962108 8962178 3'utr babo FlyBase G14188.1 AGGTTTTGAAACTATTCCTGTAATTGTAAAATCTGTAAATAATCTGTGCATTCAGTGCATGCGAGTCAAAC 14 8962158 0.915220831 6 13 111 0.888888889 1.204119983 0.166666667 0.285714286 0.444444444 14 2 0 16 2R:8962108-8962178 6 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 TGCATT 6mer3-8 dme-miR-277-3p 2R + 8962153 8962214 3'utr babo FlyBase G10795.1 GTGCATTCAGTGCATGCGAGTCAAACAAAAAATGAGAGACAAGTTTCGAAGGATAGCGGACT 5 8962178 0.930321195 3 4 19 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 2R:8962153-8962214 6 4 1579 FBgn0011300 981.73 24.67666667 37.73 0.00407444 0.162096447 0.106016433 -4 -24 -14 0.15 dme-miR-14-3p 6mer3-8 AAGACT 2R 8962265 8962270 + 2R_8962265_8962270_+ 0.997023809 0.996607622 0.996815715 0.000294298 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 2R + 8962241 8962287 3'utr babo FlyBase G14189.1 AAGTTTAAGCCGAAAGTTGTTCTTAAGACTAACCCCCAATACAACCT 29 8962263 0.734127703 2 27 174 0.939393939 1.190331698 0.090909091 0.103448276 0.212121212 29 1 1 31 2R:8962241-8962287 6 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 AAGACT 6mer3-8 dme-miR-14-3p 2R + 8962241 8962289 3'utr babo FlyBase G10796.1 AAGTTTAAGCCGAAAGTTGTTCTTAAGACTAACCCCCAATACAACCTCC 13 8962263 0.735021929 2 13 86 1 1.301029996 0.05 0.384615385 0.6 13 0 0 20 2R:8962241-8962289 6 20 1580 FBgn0011300 981.73 24.67666667 37.73 0.0203722 0.810482237 0.530082163 2 2 2 0.15 dme-miR-965-3p 6mer3-8 TACGCT 2R 8969659 8969664 - 2R_8969659_8969664_- 0.999999892 0.999999836 0.999999864 7.07E-08 CG8213 FBtr0339307|FBtr0273385|FBtr0273384 8969344|8969344|8969344 8971208|8970017|8970017 2R - 8969635 8969679 3'utr CG8213 FlyBase G21162.1 AGTCTGAATGAGAATTACGCTGATTGCAAAACGTAGGGATAAGAC 6 8969660 0.974791014 3 4 30 0.875 0.84509804 0.125 0.333333333 0.5 6 1 0 7 2R:8969635-8969679 6 CG8213 FBtr0273384|FBtr0339307|FBtr0273385 8969344|8969344|8969344 8970017|8971208|8970017 TACGCT 6mer3-8 dme-miR-965-3p 2R - 8969635 8969699 3'utr CG8213 FlyBase G16043.1 CGCGTGCCTAACACTTGTAGAGTCTGAATGAGAATTACGCTGATTGCAAAACGTAGGGATAAGAC 8 8969664 0.970780457 6 7 45 0.923076923 1.079181246 0.230769231 0.5 0.692307692 8 1 0 12 2R:8969635-8969699 6 5 1581 FBgn0033359 56 1.02 1.516666667 0.089285714 4.901960784 3.296703297 -4 0 -2 0.15 dme-miR-317-3p 8mer-A1 TGTGTTCA 2R 9097257 9097264 - 2R_9097257_9097264_- 0.630189041 0.630238025 0.630213533 3.46E-05 CG8078 FBtr0088631 9096929 9097310 2R - 9097242 9097293 3'utr CG8078 FlyBase G21171.1 ATTTATTCGTGATTCCACAAGATACAAATTGTGTTCATCCAAGGTTGCCAAC 11 9097265 0.790419418 2 11 93 1 1.079181246 0.166666667 0.090909091 0.166666667 11 0 0 12 2R:9097242-9097293 8 CG8078 FBtr0088631 9096929 9097310 TGTGTTCA 8mer-A1 dme-miR-317-3p 2R - 9097240 9097287 3'utr CG8078 FlyBase G16050.1 TCGTGATTCCACAAGATACAAATTGTGTTCATCCAAGGTTGCCAACCT 8 9097265 0.980348838 2 8 60 1 1.079181246 0.166666667 0.25 0.5 8 0 0 12 2R:9097240-9097287 8 9 1582 FBgn0033375 108.7933333 8.903333333 13.57 0.082725657 1.010857357 0.663227708 1 1 1 0.15 dme-miR-1002-5p 6mer3-8 CTACTT 2R 9105448 9105453 + 2R_9105448_9105453_+ 0.978408703 0.898689212 0.938548957 0.056370199 Vang FBtr0088566 9105387 9106796 2R + 9105427 9105480 stop_codon Vang FlyBase G14220.1 TAGCAACCAGACGCAATCGTCCTACTTGCATGTGTTTGTCTGATTTTCCCAGCT 10 9105449 0.965134252 5 10 56 1 1.113943352 0.230769231 0.3 0.461538462 10 0 0 13 2R:9105427-9105480 6 Vang FBtr0088566 9105387 9106796 CTACTT 6mer3-8 dme-miR-1002-5p 2R + 9105401 9105475 stop_codon Vang FlyBase G10814.1 GCCCCTCCAATCAACACTCCCACTCATAGCAACCAGACGCAATCGTCCTACTTGCATGTGTTTGTCTGATTTTCC 13 9105449 0.983290241 8 11 81 0.875 1.146128036 0.0625 0.333333333 0.5 12 2 0 14 2R:9105401-9105475 6 9 1583 FBgn0015838 1538.993333 53.09333333 81.26666667 0.005847979 0.169512808 0.110746514 -1 -1 -1 0.15 dme-miR-33-5p 6mer2-7 AATGCA 2R 9105994 9105999 + 2R_9105994_9105999_+ 0.783847729 0.786493649 0.785170689 0.001870934 Vang FBtr0330624|FBtr0088566 9105468|9105387 9106796|9106796 2R + 9105863 9106011 3'utr Vang FlyBase G14221.3 GTATCATCCTAAACCGACGCGAACATATCACACCCTTTGATAAGCAAACATGACTTACAAGTTCCCAAAGTATTAATTATAAGAATGATGGTTTGGCTTGCCGAACCGCGATCTTCAGATATCAACTCTTAAATGCAGCTCTTTTATAC 125 9105996 0.869110199 27 113 912 0.918367347 1.528273777 0.108843537 0.177419355 0.306122449 124 9 3 135 2R:9105863-9106011 6 Vang FBtr0330624|FBtr0088566 9105468|9105387 9106796|9106796 AATGCA 6mer2-7 dme-miR-33-5p 2R + 9105695 9106021 3'utr Vang FlyBase G10815.1 AAGTTTAGAAAGGAAAAGTTGTTGTGAGAACAAAATGTCTAGGCAGGCCTCAGCAGCTAAATTTTGATCTTGTAACAAATGATTATTAGATGAGAAGGCAACGTACTTATCAGTGCTAAACTTGAACTTATGACCCGAATATCAAGAAACAATGCTCAAAAGCCCAGTGTATCATCCTAAACCGACGCGAACATATCACACCCTTTGATAAGCAAACATGACTTACAAGTTCCCAAAGTATTAATTATAAGAATGATGGTTTGGCTTGCCGAACCGCGATCTTCAGATATCAACTCTTAAATGCAGCTCTTTTATACACGATTTTTA 161 9105996 0.896804901 44 142 1132 0.902542373 1.425289616 0.199152542 0.347826087 0.555084746 161 16 7 213 2R:9105695-9106021 6 69 1584 FBgn0015838 1538.993333 53.09333333 81.26666667 0.044834502 1.299598192 0.849056604 -2 -2 -2 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 2R 9106357 9106363 + 2R_9106357_9106363_+ 0.617139508 0.62019998 0.618669744 0.0021641 Vang FBtr0330624|FBtr0088566 9105468|9105387 9106796|9106796 2R + 9106296 9106373 3'utr Vang FlyBase G14224.1 CAACTATAACTCGAATGCAACTGATGACAAATACATAATATAAGCGAAGACTGCCTGAATATGCATTTTATACACACA 50 9106352 0.767491 11 47 248 0.964912281 1.740362689 0.070175439 0.14 0.245614035 50 2 0 55 2R:9106296-9106373 7 Vang FBtr0330624|FBtr0088566 9105468|9105387 9106796|9106796 TGCATTT 7mer-m8 dme-miR-277-3p 2R + 9106301 9106525 3'utr Vang FlyBase G10818.1 ATAACTCGAATGCAACTGATGACAAATACATAATATAAGCGAAGACTGCCTGAATATGCATTTTATACACACAAATTGCCAACAGCCACTAGCAGGTGTATGTACTAGCCTGTGCATAGCAACCACATATATACAAAAACTCGTGTATTTTTAGAGACAAAATTATAGTGATAAGGACCCGAATTCGTATTCGAACATGTGTACGTTCCAGTGAACCCAATCTAT 93 9106351 0.969636089 28 88 494 0.937931034 2.133538908 0.172413793 0.397849462 0.613793103 93 9 0 136 2R:9106301-9106525 7 16.5 1585 FBgn0015838 1538.993333 53.09333333 81.26666667 0.010721294 0.310773481 0.203035275 5 6 5.5 0.15 dme-miR-190-5p 6mer3-8 ACATAT 2R 9119425 9119430 + 2R_9119425_9119430_+ 0.999985877 0.967255404 0.983620641 0.023143959 Su(var)2-10 FBtr0088576|FBtr0088571|FBtr0088574 9119072|9119072|9119072 9120105|9120105|9119480 2R + 9119395 9119448 5'utr Su(var)2-10 FlyBase G14242.1 ATTGTCCAAAATGAAAATTACATATATGTTACATATGATTCTGACTTCATCATC 7 9119430 0.98713905 6 7 62 1 0.954242509 0 0.142857143 0.333333333 7 0 0 9 2R:9119395-9119448 6 Su(var)2-10 FBtr0088571|FBtr0088574|FBtr0088576 9119072|9119072|9119072 9120105|9119480|9120105 ACATAT 6mer3-8 dme-miR-190-5p 2R + 9119420 9119451 5'utr Su(var)2-10 FlyBase G10838.1 ATGTTACATATGATTCTGACTTCATCATCACT 5 9119442 0.94091494 3 5 38 1 0.84509804 0 0.4 0.571428571 5 0 0 7 2R:9119420-9119451 6 4.5 1586 FBgn0003612 1532.696667 79.66 122.23 0.002936002 0.056490083 0.036815839 -5 -17 -11 0.15 dme-miR-970-3p 7mer-A1 CTTATGA 2R 9119488 9119494 + 2R_9119488_9119494_+ 0.791436681 0.716059665 0.753748173 0.053299588 Su(var)2-10 FBtr0088576|FBtr0088571 9119072|9119072 9120105|9120105 2R + 9119449 9119506 5'utr-coding Su(var)2-10 FlyBase G14243.1 ACTTATTGTTATTCAAATATAATTAGGTCCCCGATTCCGCTTATGACTTTAGTGCATC 65 9119483 0.97968658 8 63 434 0.986666667 1.86923172 0.173333333 0.153846154 0.266666667 65 1 0 74 2R:9119449-9119506 7 Su(var)2-10 FBtr0088571|FBtr0088576 9119072|9119072 9120105|9120105 CTTATGA 7mer-A1 dme-miR-970-3p 2R + 9119464 9119504 5'utr-coding Su(var)2-10 FlyBase G10839.1 AATATAATTAGGTCCCCGATTCCGCTTATGACTTTAGTGCA 56 9119483 0.837976182 3 55 363 0.975308642 1.897627091 0.296296296 0.339285714 0.543209877 56 2 0 79 2R:9119464-9119504 7 59.5 1587 FBgn0003612 1532.696667 79.66 122.23 0.038820467 0.746924429 0.486787204 5 5 5 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 2R 9119625 9119630 + 2R_9119625_9119630_+ 0.978785207 0.935799904 0.957292556 0.030395197 Su(var)2-10 FBtr0088576|FBtr0088571 9119072|9119072 9120105|9120105 2R + 9119574 9119647 3'utr Su(var)2-10 FlyBase G14244.1 ATGTTTATGTTTCAAAAAAGTGACCAGAAGGGCTATTTATCATGATAATTTTGTGTTAGATCTACGGAGTCCAG 7 9119623 0.986005129 6 7 61 1 0.84509804 0.714285714 0 0 7 0 0 7 2R:9119574-9119647 6 Su(var)2-10 FBtr0088571|FBtr0088576 9119072|9119072 9120105|9120105 TGTGTT 6mer3-8 dme-miR-317-3p 2R + 9119579 9119646 3'utr Su(var)2-10 FlyBase G10840.1 TATGTTTCAAAAAAGTGACCAGAAGGGCTATTTATCATGATAATTTTGTGTTAGATCTACGGAGTCCA 11 9119610 0.968500286 6 10 61 1 1.255272505 0.055555556 0.363636364 0.611111111 11 0 0 18 2R:9119579-9119646 6 3.5 1588 FBgn0003612 1532.696667 79.66 122.23 0.002283557 0.043936731 0.028634541 2 15 8.5 0.15 dme-miR-282-5p 8mer-A1 AGAGGCTA 2R 9120674 9120681 + 2R_9120674_9120681_+ 0.637906618 0.637906852 0.637906735 2.12E-07 Su(var)2-10 FBtr0088577|FBtr0088570|FBtr0088575 9120537|9120537|9120537 9120816|9120816|9120816 2R + 9120631 9120719 3'utr Su(var)2-10 FlyBase G14248.1 TTTTCGGTTTCACTTCCGGTGGCGCACGGCCACATATTACCTTAGAGGCTATTCTTCGGCGTTCGATTCGCCGCCTTGCATCACCTCAT 36 9120673 0.985591309 9 35 289 0.953488372 1.612783857 0.069767442 0.194444444 0.325581395 36 2 0 41 2R:9120631-9120719 8 Su(var)2-10 FBtr0088575|FBtr0088570|FBtr0088577 9120537|9120537|9120537 9120816|9120816|9120816 AGAGGCTA 8mer-A1 dme-miR-282-5p 2R + 9120656 9120695 3'utr Su(var)2-10 FlyBase G10846.1 ACGGCCACATATTACCTTAGAGGCTATTCTTCGGCGTTCG 20 9120673 0.771858149 4 17 148 0.857142857 1.380211242 0.142857143 0.35 0.535714286 20 4 0 24 2R:9120656-9120695 8 25 1589 FBgn0003612 1532.696667 79.66 122.23 0.01631112 0.313833794 0.204532439 1 1 1 0.15 dme-miR-1012-3p 7mer-m8 TTGACTA 2R 9121505 9121511 + 2R_9121505_9121511_+ 0.524854426 0.327158405 0.426006416 0.139792182 Su(var)2-10 FBtr0302506|FBtr0343996 9121130|9121130 9121610|9121610 2R + 9121494 9121534 3'utr Su(var)2-10 FlyBase G14252.1 TGAACAATGCTTTGACTATGACATGATGCAAACCCCCTAAA 38 9121516 0.767068584 7 35 258 0.902439024 1.091080469 0.024390244 0.078947368 0.146341463 38 2 2 37 2R:9121494-9121534 7 Su(var)2-10 FBtr0343996|FBtr0302506 9121130|9121130 9121610|9121610 TTGACTA 7mer-m8 dme-miR-1012-3p 2R + 9121494 9121551 3'utr Su(var)2-10 FlyBase G10848.1 TGAACAATGCTTTGACTATGACATGATGCAAACCCCCTAAATATCTGAACGAACAAAT 17 9121517 0.980262531 5 15 108 0.846153846 1.342422681 0.076923077 0.470588235 0.653846154 17 4 0 22 2R:9121494-9121551 7 26 1590 FBgn0003612 1532.696667 79.66 122.23 0.016963565 0.326387145 0.212713736 -11 -12 -11.5 0.15 dme-miR-965-3p 6mer3-8 TACGCT 2R 9123400 9123405 - 2R_9123400_9123405_- 0.999993471 0.99999149 0.999992481 1.41E-06 CG18659 FBtr0339371|FBtr0306382|FBtr0339372|FBtr0088626|FBtr0306381|FBtr0302497|FBtr0302498 9123302|9123302|9123302|9123302|9123302|9123302|9123302 9127111|9125499|9123701|9123701|9127111|9123701|9123701 2R - 9123308 9123462 3'utr CG18659 FlyBase G21196.1 TTTAACAATTGCATGAATCGGAACTCTCGCTAACTACGCATACTTACATACATATTGTACGCTGGACTTCCAAATCAAAAGACACAAGAATCTAGAGTAGCATGAATTTAAGCCAATTAGCCTAACAAATTACCAATAAATATAAAATAAATTCC 113 9123396 0.962317556 17 109 561 0.970588235 1.819543936 0.139705882 0.168141593 0.308823529 113 3 1 132 2R:9123308-9123462 6 CG18659 FBtr0339372|FBtr0306382|FBtr0339371|FBtr0302498|FBtr0302497|FBtr0306381|FBtr0088626 9123302|9123302|9123302|9123302|9123302|9123302|9123302 9123701|9125499|9127111|9123701|9123701|9127111|9123701 TACGCT 6mer3-8 dme-miR-965-3p 2R - 9123320 9123459 3'utr CG18659 FlyBase G16073.1 AACAATTGCATGAATCGGAACTCTCGCTAACTACGCATACTTACATACATATTGTACGCTGGACTTCCAAATCAAAAGACACAAGAATCTAGAGTAGCATGAATTTAAGCCAATTAGCCTAACAAATTACCAATAAATAT 87 9123399 0.964967362 16 85 445 0.967479675 1.598425707 0.097560976 0.310344828 0.512195122 87 2 2 119 2R:9123320-9123459 6 77 1591 FBgn0027561 809.6966667 28.81666667 43.97666667 0.095097341 2.672064777 1.750928523 -9 -6 -7.5 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 2R 9123645 9123651 - 2R_9123645_9123651_- 0.455879857 0.449332023 0.45260594 0.004630064 CG18659 FBtr0339371|FBtr0306382|FBtr0339372|FBtr0088626|FBtr0306381|FBtr0302497|FBtr0302498 9123302|9123302|9123302|9123302|9123302|9123302|9123302 9127111|9125499|9123701|9123701|9127111|9123701|9123701 2R - 9123591 9123681 3'utr CG18659 FlyBase G21197.2 AACCTGCATCAAATATGATACCAAAATAAGTGTGATTGATAGATTGTGTTGTAAATAGCTAGGAGAGATAGGCAAAATCAAGGATGGGAGA 442 9123645 0.950367801 19 415 2369 0.941287879 1.617175143 0.115530303 0.167420814 0.303030303 442 20 11 497 2R:9123591-9123681 7 CG18659 FBtr0339372|FBtr0306382|FBtr0339371|FBtr0302498|FBtr0302497|FBtr0306381|FBtr0088626 9123302|9123302|9123302|9123302|9123302|9123302|9123302 9123701|9125499|9127111|9123701|9123701|9127111|9123701 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 9123591 9123690 3'utr CG18659 FlyBase G16074.3 TGGTCAGATAACCTGCATCAAATATGATACCAAAATAAGTGTGATTGATAGATTGTGTTGTAAATAGCTAGGAGAGATAGGCAAAATCAAGGATGGGAGA 346 9123645 0.926405101 19 322 2065 0.931863727 1.588271707 0.162324649 0.341040462 0.543086172 346 23 11 465 2R:9123591-9123690 7 242 1592 FBgn0027561 809.6966667 28.81666667 43.97666667 0.298877357 8.397917872 5.502918214 -6 -6 -6 0.15 dme-bantam-3p 6mer3-8 TGATCT 2R 9124111 9124116 - 2R_9124111_9124116_- 0.659147188 0.799397956 0.729272572 0.099172292 CG18659 FBtr0339371|FBtr0306382|FBtr0306381 9123302|9123302|9123302 9127111|9125499|9127111 2R - 9124007 9124142 3'utr CG18659 FlyBase G21199.1 CAGCAGCCACTGGAGGACAGCATGAATGATCTGATATCGCTGGACGATAGCAACAACACCAGCTTCGACCTGGAGGACTTCGATCCGCTCAATCAGAATGCTCGTCCGTTGCCGCCGCTCAGCACGGCATTTGCCA 111 9124116 0.96974228 14 107 605 0.95620438 1.8162413 0.299270073 0.189189189 0.343065693 111 5 1 131 2R:9124007-9124142 6 CG18659 FBtr0306382|FBtr0339371|FBtr0306381 9123302|9123302|9123302 9125499|9127111|9127111 TGATCT 6mer3-8 dme-bantam-3p 2R - 9124093 9124144 3'utr CG18659 FlyBase G16078.1 AACAGCAGCCACTGGAGGACAGCATGAATGATCTGATATCGCTGGACGATAG 30 9124116 0.891078334 2 28 169 0.952380952 1.602059991 0.452380952 0.266666667 0.476190476 30 2 0 40 2R:9124093-9124144 6 55 1593 FBgn0027561 809.6966667 28.81666667 43.97666667 0.067926672 1.908617698 1.250663231 0 0 0 0.15 dme-miR-278-3p 7mer-A1 CCACCGA 2R 9124998 9125004 - 2R_9124998_9125004_- 0.80070525 0.818257872 0.809481561 0.012411562 CG18659 FBtr0339371|FBtr0306382|FBtr0306381 9123302|9123302|9123302 9127111|9125499|9127111 2R - 9124877 9125070 5'utr CG18659 FlyBase G21201.1 AGACCGCGTCAGCCCCTGCCTACCGCCGATTCCAGCAGCTTTGATAGTCCGCCGGACGTACAATCTCCACCGATTCCGCCCCGGAGGCAGGGCAGCTCGAATGCGATTGTGGCGGCCACGGCTGCAGCCGTCAGTGCAGAGATTAGCAAACTGGAACGTAACTGCTGGAAGGACGAGCCCGGAAATGATTCTGT 488 9124997 0.895668955 13 487 1430 0.990654206 2.72427587 0.011214953 0.081967213 0.162616822 488 5 0 530 2R:9124877-9125070 7 CG18659 FBtr0306382|FBtr0339371|FBtr0306381 9123302|9123302|9123302 9125499|9127111|9127111 CCACCGA 7mer-A1 dme-miR-278-3p 2R - 9124953 9125011 5'utr CG18659 FlyBase G16081.1 ACAATCTCCACCGATTCCGCCCCGGAGGCAGGGCAGCTCGAATGCGATTGTGGCGGCCA 160 9124997 0.895102274 3 156 462 0.973568282 1.566241023 0.013215859 0.35 0.54185022 160 1 5 221 2R:9124953-9125011 7 314 1594 FBgn0027561 809.6966667 28.81666667 43.97666667 0.387799546 10.89647195 7.14015008 -7 -7 -7 0.15 dme-miR-1008-3p 7mer-A1 GCTGTGA 2R 9125426 9125432 - 2R_9125426_9125432_- 0.803453754 0.803939601 0.803696678 0.000343512 CG18659 FBtr0306382 9123302 9125499 2R - 9125399 9125482 5'utr CG18659 FlyBase G21203.1 AGCCGTTCACATGCTTGCCGCTAAGCTAAATCGACCACTCATCTCGATGTGCTGTGAATTTATGTTGTTCTCATGCTCTTCTTG 165 9125435 0.987219047 8 162 1432 0.989189189 2.26245109 0.064864865 0.109090909 0.205405405 165 2 0 183 2R:9125399-9125482 7 CG18659 FBtr0306382 9123302 9125499 GCTGTGA 7mer-A1 dme-miR-1008-3p 2R - 9125385 9125483 5'utr CG18659 FlyBase G16083.1 CAGCCGTTCACATGCTTGCCGCTAAGCTAAATCGACCACTCATCTCGATGTGCTGTGAATTTATGTTGTTCTCATGCTCTTCTTGTTTTTGTTTCCTTG 142 9125435 0.988007058 9 138 1247 0.977578475 1.736396502 0.058295964 0.457746479 0.65470852 142 2 3 218 2R:9125385-9125483 7 147.5 1595 FBgn0027561 809.6966667 28.81666667 43.97666667 0.182166984 5.118565645 3.354051391 3 3 3 0.15 dme-miR-184-3p 6mer2-7 CCGTCC 2R 9125754 9125759 - 2R_9125754_9125759_- 0.592183507 0.621737391 0.606960449 0.020897763 CG18659 FBtr0339371|FBtr0306381 9123302|9123302 9127111|9127111 2R - 9125738 9125801 5'utr CG18659 FlyBase G21205.1 GATCCGGCGCCAGGGAGCCGCGGGAGTTCCTGCGACGCGGTCCCGTCCCGCTGGCCATGTCTAG 10 9125761 0.944864259 3 9 37 1 1 0.6 0 0 10 0 0 10 2R:9125738-9125801 6 CG18659 FBtr0339371|FBtr0306381 9123302|9123302 9127111|9127111 CCGTCC 6mer2-7 dme-miR-184-3p 2R - 9125726 9125777 5'utr CG18659 FlyBase G16086.1 AGTTCCTGCGACGCGGTCCCGTCCCGCTGGCCATGTCTAGCTCGAGCAGCCA 6 9125761 0.942814823 2 5 23 0.777777778 0.84509804 0 0.5 0.666666667 6 2 0 7 2R:9125726-9125777 6 7 1596 FBgn0027561 809.6966667 28.81666667 43.97666667 0.008645213 0.24291498 0.15917532 2 2 2 0.15 dme-miR-995-5p 7mer-A1 ATTCGGA 2R 9125942 9125948 - 2R_9125942_9125948_- 0.781659465 0.499072991 0.640366228 0.19981883 CG18659 FBtr0339371|FBtr0306381 9123302|9123302 9127111|9127111 2R - 9125919 9125987 5'utr CG18659 FlyBase G21207.1 GTGGCACGCACTTCCACTTTGGACTTGGCTCCCCGAATCATTCGGATCGTCCTGACGGCACCAGCGGAG 19 9125968 0.973974379 8 19 117 1 1.322219295 0.238095238 0.105263158 0.19047619 19 0 0 21 2R:9125919-9125987 7 CG18659 FBtr0339371|FBtr0306381 9123302|9123302 9127111|9127111 ATTCGGA 7mer-A1 dme-miR-995-5p 2R - 9125918 9125972 5'utr CG18659 FlyBase G16087.1 ACTTTGGACTTGGCTCCCCGAATCATTCGGATCGTCCTGACGGCACCAGCGGAGG 9 9125935 0.965487522 3 9 49 1 1.146128036 0 0.444444444 0.642857143 9 0 0 14 2R:9125918-9125972 7 9 1597 FBgn0027561 809.6966667 28.81666667 43.97666667 0.011115274 0.31231926 0.204653983 20 -13 3.5 0.15 dme-miR-283-5p 6mer3-8 TGATAT 2R 9135184 9135189 + 2R_9135184_9135189_+ 0.639661338 0.757890221 0.698775779 0.083600457 Hydr1 FBtr0300180|FBtr0339361|FBtr0339360|FBtr0302496|FBtr0088580 9135052|9135052|9135052|9135052|9135052 9135453|9135453|9135453|9135453|9135453 2R + 9135074 9135254 3'utr Hydr1 FlyBase G14265.1 GGTCGGTCGGTCCGCTAGTCTAGTTCAGTTTTTGTCCAGTTGAACACGTAGATATACGAGAATGTTTGTATTCCGATAGATTGCCGTCGGCGAAGACTCTTGTACACATGTGATATGAAACGTTGATCAAAATCCAAAGTGTTGTTATACTTATATACAGCGAACAGGGAACCAAATTATC 55 9135174 0.978282638 20 51 338 0.930555556 1.826074803 0.208333333 0.236363636 0.416666667 55 5 0 67 2R:9135074-9135254 6 Hydr1 FBtr0088580|FBtr0302496|FBtr0339360|FBtr0339361|FBtr0300180 9135052|9135052|9135052|9135052|9135052 9135453|9135453|9135453|9135453|9135453 TGATAT 6mer3-8 dme-miR-283-5p 2R + 9135130 9135221 3'utr Hydr1 FlyBase G10857.1 CGAGAATGTTTGTATTCCGATAGATTGCCGTCGGCGAAGACTCTTGTACACATGTGATATGAAACGTTGATCAAAATCCAAAGTGTTGTTAT 35 9135173 0.928514117 14 33 199 0.942307692 1.389166084 0.173076923 0.314285714 0.538461538 35 2 1 49 2R:9135130-9135221 6 21 1598 FBgn0033382 206.7266667 10.77333333 16.46666667 0.101583411 1.949257426 1.275303644 10 11 10.5 0.15 dme-miR-190-5p 8mer-A1 ACATATCA 2R 9135308 9135315 + 2R_9135308_9135315_+ 0.60824112 0.56272235 0.585481735 0.032186581 Hydr1 FBtr0300180|FBtr0339361|FBtr0339360|FBtr0302496|FBtr0088580 9135052|9135052|9135052|9135052|9135052 9135453|9135453|9135453|9135453|9135453 2R + 9135284 9135320 3'utr Hydr1 FlyBase G14266.1 TACTCTTAGATCGTGACTTTAGTGACATATCAGGTTG 6 9135302 0.820679188 4 6 51 1 0.903089987 0.5 0.333333333 0.5 6 0 0 8 2R:9135284-9135320 8 Hydr1 FBtr0088580|FBtr0302496|FBtr0339360|FBtr0339361|FBtr0300180 9135052|9135052|9135052|9135052|9135052 9135453|9135453|9135453|9135453|9135453 ACATATCA 8mer-A1 dme-miR-190-5p 2R + 9135288 9135338 3'utr Hydr1 FlyBase G10858.1 CTTAGATCGTGACTTTAGTGACATATCAGGTTGAAATTGCAAATAAGCTGT 5 9135302 0.97404207 5 5 28 1 0.903089987 0.125 0.6 0.75 5 0 0 8 2R:9135288-9135338 8 4 1599 FBgn0033382 206.7266667 10.77333333 16.46666667 0.019349221 0.371287129 0.24291498 6 6 6 0.15 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 2R 9162302 9162309 - 2R_9162302_9162309_- 0.625047028 0.62523728 0.625142154 0.000134562 CG8046 FBtr0088621 9162035 9162726 2R - 9162278 9162328 3'utr CG8046 FlyBase G21237.1 ACTTTTGTACACCAACGATTGGTGCTAACTACGGATCTGAGCGAGCGCTAA 36 9162310 0.93375182 6 33 183 0.923076923 1.681241237 0.192307692 0.388888889 0.576923077 36 4 0 48 2R:9162278-9162328 8 CG8046 FBtr0088621 9162035 9162726 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 2R - 9162280 9162326 3'utr CG8046 FlyBase G16109.1 TTTTGTACACCAACGATTGGTGCTAACTACGGATCTGAGCGAGCGCT 31 9162310 0.824973097 7 30 164 0.951219512 1.113943352 0.195121951 0.290322581 0.463414634 31 0 2 39 2R:9162280-9162326 8 32.5 1600 FBgn0033388 91.66666667 5.236666667 8.053333333 0.354545455 6.206238065 4.035596026 1 1 1 0.15 dme-miR-932-5p 7mer-m8 GGAATTG 2R 9162508 9162514 - 2R_9162508_9162514_- 0.694437246 0.695834752 0.695135999 0.000988252 CG8046 FBtr0088620|FBtr0088621 9162424|9162035 9162726|9162726 2R - 9162504 9162537 3'utr CG8046 FlyBase G21240.1 ACAAATCCAAGCGTAGAGTTTGGGGAATTGTGCT 9 9162517 0.671581557 3 8 42 0.916666667 1.041392685 0 0.222222222 0.416666667 9 1 0 11 2R:9162504-9162537 7 CG8046 FBtr0088620|FBtr0088621 9162424|9162035 9162726|9162726 GGAATTG 7mer-m8 dme-miR-932-5p 2R - 9162498 9162534 3'utr CG8046 FlyBase G16111.1 AATCCAAGCGTAGAGTTTGGGGAATTGTGCTTTGCCA 7 9162517 0.918261274 5 7 34 1 1.041392685 0 0.428571429 0.636363636 7 0 0 11 2R:9162498-9162534 7 8 1601 FBgn0033388 91.66666667 5.236666667 8.053333333 0.087272727 1.52768937 0.993377483 3 3 3 0.15 dme-miR-190-5p 6mer3-8 ACATAT 2R 9167792 9167797 - 2R_9167792_9167797_- 0.999999974 0.999984878 0.999992426 1.07E-05 Rme-8 FBtr0088618|FBtr0339370 9167761|9167761 9168133|9168133 2R - 9167793 9167820 3'utr Rme-8 FlyBase G21252.1 TAGAGCATGCATAAAGTGATTAAACATA 14 9167811 0.631008551 3 14 61 1 1.255272505 0.111111111 0.142857143 0.333333333 14 0 0 18 2R:9167793-9167820 4 Rme-8 FBtr0339370|FBtr0088618 9167761|9167761 9168133|9168133 ACATAT 6mer3-8 dme-miR-190-5p 2R - 9167791 9167823 3'utr Rme-8 FlyBase G16119.1 AACTAGAGCATGCATAAAGTGATTAAACATATT 13 9167809 0.674595167 3 12 65 0.928571429 1.113943352 0.071428571 0.076923077 0.142857143 13 1 0 13 2R:9167791-9167823 6 12 1602 FBgn0015477 1892.016667 29.22333333 44.74333333 0.006342439 0.410630774 0.268196379 14 12 13 0.15 dme-miR-932-5p 7mer-m8 GGAATTG 2R 9168028 9168034 - 2R_9168028_9168034_- 0.702956654 0.702972794 0.702964724 1.14E-05 Rme-8 FBtr0088618|FBtr0339370 9167761|9167761 9168133|9168133 2R - 9167996 9168080 3'utr Rme-8 FlyBase G21254.1 CGCTAGCATGAAGCCTTCGATTGCCACGGAATCAGAAAACGGAAACGGAATTGCACGGGTTGCCCCCAATTATTGTATTAAACTT 20 9168009 0.70927178 8 19 119 0.952380952 1.301029996 0.095238095 0.05 0.095238095 20 1 0 20 2R:9167996-9168080 7 Rme-8 FBtr0339370|FBtr0088618 9167761|9167761 9168133|9168133 GGAATTG 7mer-m8 dme-miR-932-5p 2R - 9167989 9168042 3'utr Rme-8 FlyBase G16121.1 ACGGAAACGGAATTGCACGGGTTGCCCCCAATTATTGTATTAAACTTTATTTTA 8 9168030 0.979701294 5 6 43 0.769230769 1 0.307692308 0.5 0.692307692 8 3 0 10 2R:9167989-9168042 7 8 1603 FBgn0015477 1892.016667 29.22333333 44.74333333 0.004228293 0.27375385 0.178797586 -25 -4 -14.5 0.15 dme-miR-184-3p 6mer2-7 CCGTCC 2R 9178253 9178258 - 2R_9178253_9178258_- 0.985518245 0.953851954 0.9696851 0.022391385 ltd FBtr0346635|FBtr0089932|FBtr0089933|FBtr0339369|FBtr0346636|FBtr0089931|FBtr0089934 9177862|9177862|9177862|9177862|9177862|9177862|9177862 9178433|9178433|9178433|9178433|9178433|9178433|9178433 2R - 9178235 9178282 3'utr ltd FlyBase G21289.1 AGACTTAGTGTCATCCGTATCATCCCGTCCGTCTTTATCTTTAACACC 14 9178260 0.88381296 2 12 133 0.823529412 0.669006781 0.117647059 0.142857143 0.294117647 14 1 2 14 2R:9178235-9178282 6 ltd FBtr0089934|FBtr0346636|FBtr0089931|FBtr0089933|FBtr0339369|FBtr0346635|FBtr0089932 9177862|9177862|9177862|9177862|9177862|9177862|9177862 9178433|9178433|9178433|9178433|9178433|9178433|9178433 CCGTCC 6mer2-7 dme-miR-184-3p 2R - 9178233 9178270 3'utr ltd FlyBase G16143.1 ATCCGTATCATCCCGTCCGTCTTTATCTTTAACACCCC 9 9178260 0.973576267 3 9 59 1 1.176091259 0 0.666666667 0.8 9 0 0 15 2R:9178233-9178270 6 11.5 1604 FBgn0002567 31.33333333 1.753333333 2.75 0.367021277 6.558935361 4.181818182 2 2 2 0.15 dme-miR-276a-3p 7mer-A1 GTTCCTA 2R 9186782 9186788 - 2R_9186782_9186788_- 0.820389018 0.820007398 0.820198208 0.000269832 CG8026 FBtr0302512|FBtr0088611 9186668|9186668 9186974|9188013 2R - 9186694 9186819 3'utr CG8026 FlyBase G21291.1 TGGTCTTTTCGTAGTAAGTAAAGTGATTGTTGTTCCTAAGTGTGGATCAGAATGGATTTGTGATTGAATTCAGACGAAAGTGTTACAATATACCTGTGAAATATAAGTCCATAGCCTCACTCTTGC 121 9186791 0.987379054 21 113 991 0.945205479 1.662757832 0.212328767 0.165289256 0.308219178 121 6 2 138 2R:9186694-9186819 7 CG8026 FBtr0302512|FBtr0088611 9186668|9186668 9186974|9188013 GTTCCTA 7mer-A1 dme-miR-276a-3p 2R - 9186743 9186839 3'utr CG8026 FlyBase G16145.1 AGTTGTTGCGAAGACTTATTTGGTCTTTTCGTAGTAAGTAAAGTGATTGTTGTTCCTAAGTGTGGATCAGAATGGATTTGTGATTGAATTCAGACGA 95 9186791 0.987564343 17 93 827 0.98630137 1.857332496 0.171232877 0.389473684 0.602739726 95 1 1 144 2R:9186743-9186839 7 58.5 1605 FBgn0033391 992.26 57.94 89.16 0.058956322 1.009665171 0.656123822 3 3 3 0.15 dme-miR-932-5p 7mer-A1 GAATTGA 2R 9187003 9187009 - 2R_9187003_9187009_- 0.439723152 0.448835699 0.444279425 0.006443511 CG8026 FBtr0088611 9186668 9188013 2R - 9186973 9187030 stop_codon CG8026 FlyBase G21293.1 TCCTGCTCGCCAGGCGGAAGCGAATTGAGACTAAAGAGGATGCGTCGGACGTGTGATT 48 9187005 0.838945445 4 41 158 0.962264151 1.40654018 0.283018868 0.083333333 0.169811321 48 1 1 51 2R:9186973-9187030 7 CG8026 FBtr0088611 9186668 9188013 GAATTGA 7mer-A1 dme-miR-932-5p 2R - 9186938 9187032 stop_codon CG8026 FlyBase G16146.1 TTTCCTGCTCGCCAGGCGGAAGCGAATTGAGACTAAAGAGGATGCGTCGGACGTGTGATTTTCCTTTGGTTGGATTCCTTTTAGGCTTCTAAGAT 41 9187005 0.823719942 7 39 200 0.929824561 1.72427587 0.280701754 0.317073171 0.50877193 41 4 0 53 2R:9186938-9187032 7 32.5 1606 FBgn0033391 992.26 57.94 89.16 0.032753512 0.560925095 0.364513235 -4 -4 -4 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2R 9187765 9187770 - 2R_9187765_9187770_- 0.728865656 0.729432139 0.729148897 0.000400505 CG8026 FBtr0088611|FBtr0088611|FBtr0088611|FBtr0302511|FBtr0302511|FBtr0302511 9186668|9186668|9186668|9187361|9187361|9187361 9188013|9188013|9188013|9188013|9188013|9188013 2R - 9187750 9187807 3'utr CG8026 FlyBase G21297.1 TTGTACATCCTTCACTCCCAACTTCGAAAGTAACTGATGTGATCGGGGCGTCGTCAAA 306 9187773 0.790896844 9 289 1571 0.947674419 1.66811956 0.316860465 0.114379085 0.212209302 306 12 6 326 2R:9187750-9187807 6 CG8026 FBtr0302511|FBtr0302511|FBtr0302511|FBtr0088611|FBtr0088611|FBtr0088611 9187361|9187361|9187361|9186668|9186668|9186668 9188013|9188013|9188013|9188013|9188013|9188013 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 9187752 9187808 3'utr CG8026 FlyBase G16151.2 ATTGTACATCCTTCACTCCCAACTTCGAAAGTAACTGATGTGATCGGGGCGTCGTCA 213 9187773 0.771512385 11 196 1074 0.905198777 1.693140461 0.244648318 0.38028169 0.596330275 213 26 5 296 2R:9187752-9187808 6 252.5 1607 FBgn0033391 992.26 57.94 89.16 0.254469595 4.357956507 2.831987438 3 3 3 0.15 dme-miR-980-3p 7mer-A1 GCAGCTA 2R 9187911 9187917 - 2R_9187911_9187917_- 0.815544993 0.8151055 0.815325247 0.000310773 CG8026 FBtr0088611|FBtr0302511 9186668|9187361 9188013|9188013 2R - 9187817 9188049 stop_codon CG8026 FlyBase G21298.1 ATGGTCATGCTGATCTGGGAGAAGCTGACCAGCTAGATGGAGTATTAGTACTAGATCATCGAATCTGGAATCTGACAGAGAATTTAAGCTAAGCACCTAGAATACACGAATCTTTCTCGTTTCCTCCGATGTGCAGCTAACAGCAGAAAATGACAAACTTATTCTGTATTATTGTTGTAACTCGATTTCGGTTTAGCCCTAGCACCTTACTTTAGCCTTAAGTGTATTCCATA 545 9187920 0.977715505 36 530 3511 0.974151858 2.303196057 0.248788368 0.111926606 0.2180937 545 14 2 603 2R:9187817-9188049 7 CG8026 FBtr0302511|FBtr0088611 9187361|9186668 9188013|9188013 GCAGCTA 7mer-A1 dme-miR-980-3p 2R - 9187826 9188028 stop_codon CG8026 FlyBase G16152.1 AAGCTGACCAGCTAGATGGAGTATTAGTACTAGATCATCGAATCTGGAATCTGACAGAGAATTTAAGCTAAGCACCTAGAATACACGAATCTTTCTCGTTTCCTCCGATGTGCAGCTAACAGCAGAAAATGACAAACTTATTCTGTATTATTGTTGTAACTCGATTTCGGTTTAGCCCTAGCACCTTACTTTAGCCTTAAGTG 389 9187920 0.841531504 25 382 2529 0.98791019 2.280274774 0.27806563 0.375321337 0.580310881 389 5 2 572 2R:9187826-9188028 7 411.5 1608 FBgn0033391 992.26 57.94 89.16 0.414709854 7.102174663 4.61529834 3 3 3 0.15 dme-miR-317-3p 8mer-A1 TGTGTTCA 2R 9204658 9204665 - 2R_9204658_9204665_- 0.631088223 0.631069542 0.631078882 1.32E-05 CG8027 FBtr0088609 9204408 9204905 2R - 9204639 9204689 3'utr CG8027 FlyBase G21307.1 CCAGCTTTTGCAGTCGACCTGTTTTGTGTTCAGTTTCATAATATCTAAGTT 59 9204666 0.718233928 9 57 685 0.955223881 1.329058719 0.343283582 0.101694915 0.208955224 59 1 2 64 2R:9204639-9204689 8 CG8027 FBtr0088609 9204408 9204905 TGTGTTCA 8mer-A1 dme-miR-317-3p 2R - 9204640 9204685 3'utr CG8027 FlyBase G16159.1 CTTTTGCAGTCGACCTGTTTTGTGTTCAGTTTCATAATATCTAAGT 47 9204666 0.722405198 6 45 523 0.961538462 1.875061263 0.371794872 0.425531915 0.653846154 47 3 0 75 2R:9204640-9204685 8 52 1609 FBgn0033392 84.66666667 3.863333333 5.83 0.614173228 13.45987921 8.919382504 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 9204863 9204869 - 2R_9204863_9204869_- 0.776689439 0.775636345 0.776162892 0.000744654 CG8027 FBtr0088609|FBtr0088609|FBtr0088609 9204408|9204408|9204408 9204905|9204905|9204905 2R - 9204764 9204943 stop_codon CG8027 FlyBase G21308.1 AGGCGAAGCTGGTGAGGCGCTGTGTGCAGCGCTTGTAGGATCGATTTCGTGAAGTTCTCTCCCTTCTGCAATGTTGTGATATGTTGTGAACATTTATGTAAATTGGCCATTTCTGCAAGCGATCATAGTCAAATCTAGTTGTAGGCCATGTGTAAGGCTATTTTTCTAGTTCTTTAGGTG 57 9204871 0.841418001 22 54 535 0.945945946 1.367976785 0.135135135 0.228070175 0.405405405 57 2 2 70 2R:9204764-9204943 7 CG8027 FBtr0088609|FBtr0088609|FBtr0088609 9204408|9204408|9204408 9204905|9204905|9204905 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 9204850 9204895 3'utr CG8027 FlyBase G16162.1 GTGAAGTTCTCTCCCTTCTGCAATGTTGTGATATGTTGTGAACATT 26 9204871 0.724780626 9 25 265 0.971428571 1.531478917 0.314285714 0.269230769 0.457142857 26 1 0 34 2R:9204850-9204895 7 24 1610 FBgn0033392 84.66666667 3.863333333 5.83 0.283464567 6.212251941 4.116638079 2 2 2 0.15 dme-miR-33-5p 6mer3-8 CAATGC 2R 9209144 9209149 + 2R_9209144_9209149_+ 0.999589892 0.999947285 0.999768588 0.00025272 VhaAC45 FBtr0088588|FBtr0088587 9209104|9209104 9209655|9209774 2R + 9209115 9209163 3'utr VhaAC45 FlyBase G14308.1 ATCATCGGTTCACACCTTATTTGATTGTTCAATGCGCACTCAATATTCA 21 9209135 0.733172323 6 20 189 0.958333333 1.06069784 0.125 0.142857143 0.25 21 0 1 23 2R:9209115-9209163 6 VhaAC45 FBtr0088587|FBtr0088588 9209104|9209104 9209774|9209655 CAATGC 6mer3-8 dme-miR-33-5p 2R + 9209117 9209166 3'utr VhaAC45 FlyBase G10888.1 CATCGGTTCACACCTTATTTGATTGTTCAATGCGCACTCAATATTCATTC 17 9209135 0.680947875 8 14 152 0.727272727 1.204119983 0 0.176470588 0.363636364 17 6 0 16 2R:9209117-9209166 6 16 1611 FBgn0262515 1434.51 91.37 139.18 0.011153634 0.175112181 0.114959046 9 9 9 0.15 dme-miR-92b-3p 6mer3-8 GTGCAA 2R 9209596 9209601 + 2R_9209596_9209601_+ 0.999999953 0.99977769 0.999888822 0.00015719 VhaAC45 FBtr0088588|FBtr0088587 9209104|9209104 9209655|9209774 2R + 9209465 9209621 3'utr VhaAC45 FlyBase G14311.1 GAGCGCGCGCGTGTGTGTGTGTGCACATGGGCAGTAAATCTAATCCGAAGTATATCTAAGTGTTTTATAGTTTCTTGTTTGGCGCAAATATGCGAGACTAATTTATGCCTCTGTATGATAGTTTGTCATTTGTGCAACCCTCCTGTTGTTCGCAGGC 20 9209609 0.985963598 14 17 148 0.92 1.361727836 0.36 0.2 0.36 20 2 0 23 2R:9209465-9209621 6 VhaAC45 FBtr0088587|FBtr0088588 9209104|9209104 9209774|9209655 GTGCAA 6mer3-8 dme-miR-92b-3p 2R + 9209569 9209614 3'utr VhaAC45 FlyBase G10891.1 ATGCCTCTGTATGATAGTTTGTCATTTGTGCAACCCTCCTGTTGTT 7 9209609 0.966486979 4 6 59 0.875 0.84509804 0.125 0.142857143 0.25 7 1 0 7 2R:9209569-9209614 6 5.5 1612 FBgn0262515 1434.51 91.37 139.18 0.003834062 0.060194812 0.039517172 -13 -13 -13 0.15 dme-miR-33-5p 7mer-m8 CAATGCA 2R 9252851 9252857 - 2R_9252851_9252857_- 0.6745149 0.674261622 0.674388261 0.00017911 Pkn FBtr0302604|FBtr0088603|FBtr0301511|FBtr0112897|FBtr0088604|FBtr0088605|FBtr0088601 9252308|9252308|9252308|9252308|9252308|9252308|9252308 9254063|9254063|9254063|9254063|9254063|9254063|9254063 2R - 9252786 9252890 3'utr Pkn FlyBase G21313.1 TGCACACCTCATGCGAATCGAAACGAGTATAAACAATGCAGATCTTCTATTGTCATTTTTATTATGATTATGCTCACAACTTGCGGCTATAATCATCGATTTAAT 21 9252844 0.927473004 10 18 153 0.92 1.06069784 0.28 0.19047619 0.32 21 1 1 23 2R:9252786-9252890 7 Pkn FBtr0112897|FBtr0301511|FBtr0088603|FBtr0302604|FBtr0088605|FBtr0088604|FBtr0088601 9252308|9252308|9252308|9252308|9252308|9252308|9252308 9254063|9254063|9254063|9254063|9254063|9254063|9254063 CAATGCA 7mer-m8 dme-miR-33-5p 2R - 9252830 9252901 3'utr Pkn FlyBase G16164.1 GATAACGATTTTGCACACCTCATGCGAATCGAAACGAGTATAAACAATGCAGATCTTCTATTGTCATTTTTA 21 9252846 0.910310884 7 19 145 0.933333333 1.146128036 0.233333333 0.333333333 0.533333333 21 1 1 28 2R:9252830-9252901 7 13 1613 FBgn0020621 844.8 19.37333333 29.6 0.015388258 0.671025465 0.439189189 -13 -11 -12 0.15 dme-miR-2b-2-5p 6mer2-7 TGAAGA 2R 9288665 9288670 + 2R_9288665_9288670_+ 0.999958754 0.996534177 0.998246466 0.002421558 CG1968 FBtr0088596 9287961 9289026 2R + 9288631 9288692 3'utr CG1968 FlyBase G14320.1 CAGAGCAATCAATCTAAAATAGAAACAAACCTGCTGAAGATCTTCATGTCCAAGATGGACGC 16 9288677 0.975950883 6 13 82 0.909090909 1.301029996 0.272727273 0.25 0.454545455 16 2 0 20 2R:9288631-9288692 6 CG1968 FBtr0088596 9287961 9289026 TGAAGA 6mer2-7 dme-miR-2b-2-5p 2R + 9288657 9288712 3'utr CG1968 FlyBase G10898.1 AAACCTGCTGAAGATCTTCATGTCCAAGATGGACGCCTTTCTGGAACTACCCGATG 12 9288676 0.976448332 6 11 73 1 1.204119983 0.4375 0.333333333 0.5 12 0 0 16 2R:9288657-9288712 6 11.5 1614 FBgn0033401 141.2733333 8.553333333 13.19 0.081402482 1.344505066 0.871872631 -12 -11 -11.5 0.15 dme-miR-317-5p 6mer2-7 TATCCC 2R 9396395 9396400 - 2R_9396395_9396400_- 0.970464065 0.977028616 0.97374634 0.004641802 Non1 FBtr0300649|FBtr0088554 9396263|9396358 9396478|9396478 2R - 9396386 9396421 3'utr Non1 FlyBase G21351.1 TATAAACTAAGCGTCTATCTTTATCCCTGAAAAACA 22 9396401 0.948088057 6 21 158 0.958333333 1.361727836 0.041666667 0.090909091 0.166666667 22 1 0 23 2R:9396386-9396421 6 Non1 FBtr0300649|FBtr0088554 9396263|9396358 9396478|9396478 TATCCC 6mer2-7 dme-miR-317-5p 2R - 9396384 9396413 3'utr Non1 FlyBase G16192.1 AAGCGTCTATCTTTATCCCTGAAAAACATT 25 9396401 0.623016815 5 24 175 1 1.612783857 0.170731707 0.4 0.634146341 25 0 0 41 2R:9396384-9396413 6 23 1615 FBgn0028473 3601.33 199.31 303.37 0.006386529 0.115398124 0.075815011 1 1 1 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2R 9396443 9396448 - 2R_9396443_9396448_- 0.999955314 0.999997721 0.999976517 3.00E-05 Non1 FBtr0300649|FBtr0088554 9396263|9396358 9396478|9396478 2R - 9396446 9396537 stop_codon Non1 FlyBase G21352.1 AGATGCCGAAGCATTTGTTCTCCGGCAAGCGTGGAAATGGCAAGACGGATCGCCGTTAAGCGCCGCAGCCTTGGCTGGTTAAGTGATTCTAC 31 9396459 0.855264097 10 30 193 0.970588235 1.217483944 0.117647059 0.096774194 0.176470588 31 0 1 33 2R:9396446-9396537 2 Non1 FBtr0300649|FBtr0088554 9396263|9396358 9396478|9396478 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2R - 9396446 9396479 stop_codon Non1 FlyBase G16193.1 AGCGCCGCAGCCTTGGCTGGTTAAGTGATTCTAC 19 9396459 0.939739857 4 15 127 0.826086957 0.67669361 0.173913043 0.157894737 0.304347826 19 1 3 19 2R:9396446-9396479 2 16 1616 FBgn0028473 3601.33 199.31 303.37 0.004442803 0.080276955 0.052740877 11 11 11 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 9425649 9425655 + 2R_9425649_9425655_+ 0.661212483 0.659270507 0.660241495 0.001373201 prel FBtr0300293|FBtr0333003 9425641|9425641 9426107|9426107 2R + 9425603 9425689 stop_codon prel FlyBase G14324.1 TGCCTCCAAGATTGCGCAACTGTTTTCTGTCAAGAACTGAGGAACTTCTAGTCTGTACTTTTTGGAATAGATGTCGAATGGGACCGA 33 9425648 0.978537448 9 33 227 1 1.579783597 0 0.121212121 0.236842105 33 0 0 38 2R:9425603-9425689 7 prel FBtr0300293|FBtr0333003 9425641|9425641 9426107|9426107 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 9425596 9425675 stop_codon prel FlyBase G10903.1 AGAGTCATGCCTCCAAGATTGCGCAACTGTTTTCTGTCAAGAACTGAGGAACTTCTAGTCTGTACTTTTTGGAATAGATG 21 9425648 0.982486341 10 20 145 0.96969697 1.505149978 0.363636364 0.428571429 0.636363636 21 1 0 32 2R:9425596-9425675 7 22.5 1617 FBgn0033413 247.3533333 19.64666667 30.09333333 0.090962995 1.14523244 0.747673903 1 1 1 0.15 dme-bantam-3p 6mer3-8 TGATCT 2R 9425864 9425869 + 2R_9425864_9425869_+ 0.982622136 0.966053979 0.974338057 0.011715416 prel FBtr0300293|FBtr0333003 9425641|9425641 9426107|9426107 2R + 9425790 9425962 3'utr prel FlyBase G14326.1 AAACATTTATTCCAAAGCAAATCCAACTACATACTTTGCTGCATTTCATTCCGTGTGTGCGCGAATCAAACGGCTGATCTGAACGGAGACACAATTTGCTGAACACATTTCCTGCATGCTACCAAATTCTATTATTTATCGTTACTTATTTGCACTACATTATTATGTATCAT 76 9425864 0.975451329 23 74 466 0.978723404 1.662757832 0.127659574 0.210526316 0.361702128 76 1 1 92 2R:9425790-9425962 6 prel FBtr0300293|FBtr0333003 9425641|9425641 9426107|9426107 TGATCT 6mer3-8 dme-bantam-3p 2R + 9425822 9425961 3'utr prel FlyBase G10904.1 ACTTTGCTGCATTTCATTCCGTGTGTGCGCGAATCAAACGGCTGATCTGAACGGAGACACAATTTGCTGAACACATTTCCTGCATGCTACCAAATTCTATTATTTATCGTTACTTATTTGCACTACATTATTATGTATCA 62 9425865 0.972013872 14 58 341 0.928571429 1.193124598 0.238095238 0.306451613 0.488095238 62 2 4 78 2R:9425822-9425961 6 37 1618 FBgn0033413 247.3533333 19.64666667 30.09333333 0.149583592 1.883271123 1.229508197 0 -1 -0.5 0.15 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 9433367 9433372 + 2R_9433367_9433372_+ 0.960204036 0.949415205 0.954809621 0.007628834 Pdk FBtr0306807 9433272 9433952 2R + 9433315 9433415 3'utr Pdk FlyBase G14338.1 AAATAAAAAAGAAATGAGATGTGATGAGTTGAGAAATGAAGCGAACCGCCTGGCTGTGTAAAGAGTTTGCGCCACCCTGCACCAATTGAATTCAATCCAAT 829 9433365 0.961121787 16 803 3218 0.970408163 2.376120526 0.343877551 0.145958987 0.27755102 829 26 3 951 2R:9433315-9433415 6 Pdk FBtr0306807 9433272 9433952 GCTGTG 6mer2-7 dme-miR-1008-3p 2R + 9433315 9433395 3'utr Pdk FlyBase G10915.1 AAATAAAAAAGAAATGAGATGTGATGAGTTGAGAAATGAAGCGAACCGCCTGGCTGTGTAAAGAGTTTGCGCCACCCTGCA 563 9433365 0.964039765 14 545 1977 0.973193473 2.62065648 0.384615385 0.362344583 0.581585082 563 22 1 835 2R:9433315-9433395 6 669.5 1619 FBgn0017558 322.33 15.26666667 23.27333333 2.077063879 43.85371179 28.76682899 2 2 2 0.15 dme-miR-12-5p 6mer2-7 ATACTC 2R 9433770 9433775 + 2R_9433770_9433775_+ 0.999998911 0.999716909 0.99985791 0.000199404 Pdk FBtr0306807 9433272 9433952 2R + 9433750 9433863 3'utr Pdk FlyBase G14340.1 TATATACACGACAAACATTTATACTCTGAAGTAAACTGATGTTTTGAAACATTTACGAAATTAGCTTTAATTTGTGGATTTTAATTAGGCTAAAGCCCGAACTGCATGCAATGT 27 9433769 0.972947757 13 27 167 1 1.531478917 0.235294118 0.259259259 0.411764706 27 0 0 34 2R:9433750-9433863 6 Pdk FBtr0306807 9433272 9433952 ATACTC 6mer2-7 dme-miR-12-5p 2R + 9433746 9433782 3'utr Pdk FlyBase G10917.1 AACCTATATACACGACAAACATTTATACTCTGAAGTA 5 9433769 0.963316101 4 4 22 1 0.77815125 0.666666667 0.2 0.333333333 5 0 0 6 2R:9433746-9433782 6 7 1620 FBgn0017558 322.33 15.26666667 23.27333333 0.021716874 0.458515284 0.300773417 1 1 1 0.15 dme-miR-92b-3p 6mer2-7 TGCAAT 2R 9433856 9433861 + 2R_9433856_9433861_+ 0.913214913 0.842022171 0.877618542 0.050340841 Pdk FBtr0306807 9433272 9433952 2R + 9433750 9433863 3'utr Pdk FlyBase G14340.1 TATATACACGACAAACATTTATACTCTGAAGTAAACTGATGTTTTGAAACATTTACGAAATTAGCTTTAATTTGTGGATTTTAATTAGGCTAAAGCCCGAACTGCATGCAATGT 27 9433834 0.972947757 13 27 167 1 1.531478917 0.235294118 0.259259259 0.411764706 27 0 0 34 2R:9433750-9433863 6 Pdk FBtr0306807 9433272 9433952 TGCAAT 6mer2-7 dme-miR-92b-3p 2R + 9433796 9433862 3'utr Pdk FlyBase G10918.1 AAACATTTACGAAATTAGCTTTAATTTGTGGATTTTAATTAGGCTAAAGCCCGAACTGCATGCAATG 13 9433856 0.850894784 5 12 85 0.947368421 1.255272505 0.368421053 0.384615385 0.578947368 13 1 0 18 2R:9433796-9433862 6 6.5 1621 FBgn0017558 322.33 15.26666667 23.27333333 0.020165669 0.425764192 0.279289602 22 0 11 0.15 dme-miR-1003-3p 8mer-A1 ATGTGAGA 2R 9434853 9434860 - 2R_9434853_9434860_- 0.64221965 0.641722318 0.641970984 0.000351715 ced-6 FBtr0306808|FBtr0088549|FBtr0088548|FBtr0088550|FBtr0339384 9434667|9434667|9434667|9434667|9434667 9435274|9435274|9435274|9435274|9435274 2R - 9434684 9434998 3'utr ced-6 FlyBase G21372.1 AGAAACAACCGCAATGCACCTTGTTTAAACGTATCAATTTGTTGCTGTAGTTGAATAGATTAATTGATGGTCGAGTAAAGCGAATGAAAAAATGTTAACAAGTGATAAATGTGAAAATTGCTAAACAATGCTAACTGAATGTGAGAATTTTGTATAAAATAATTATAAAGACATAACCAGAAGCAAATGAATCGATTACTGTATAGAGCCGAAATACGAGGAGAATTAAAGCAAAATGAACAATATTTAATGTTATTGATGCAATATAGAGAAATATTATTATTACTATTATTATTGTGTACGTAAAGAATAAAA 201 9434864 0.976622056 49 190 1321 0.948207171 2.376576957 0.151394422 0.208955224 0.366533865 201 13 0 238 2R:9434684-9434998 8 ced-6 FBtr0339384|FBtr0088550|FBtr0088548|FBtr0088549|FBtr0306808 9434667|9434667|9434667|9434667|9434667 9435274|9435274|9435274|9435274|9435274 ATGTGAGA 8mer-A1 dme-miR-1003-3p 2R - 9434718 9435033 3'utr ced-6 FlyBase G16210.1 TGATAATAATCTGAGGTCAAGATCAAAAGAACACAAGAAACAACCGCAATGCACCTTGTTTAAACGTATCAATTTGTTGCTGTAGTTGAATAGATTAATTGATGGTCGAGTAAAGCGAATGAAAAAATGTTAACAAGTGATAAATGTGAAAATTGCTAAACAATGCTAACTGAATGTGAGAATTTTGTATAAAATAATTATAAAGACATAACCAGAAGCAAATGAATCGATTACTGTATAGAGCCGAAATACGAGGAGAATTAAAGCAAAATGAACAATATTTAATGTTATTGATGCAATATAGAGAAATATTATT 155 9434869 0.977406578 47 140 923 0.916317992 1.86332286 0.209205021 0.393548387 0.606694561 155 18 2 219 2R:9434718-9435033 8 67.5 1622 FBgn0029092 3414.266667 169.59 258.2733333 0.019769985 0.398018751 0.261351023 4 9 6.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 9478158 9478164 + 2R_9478158_9478164_+ 0.659911301 0.655504453 0.657707877 0.003116078 Camta FBtr0339381 9477617 9480076 2R + 9478117 9478210 3'utr Camta FlyBase G14347.1 ATAGTTACATTTGTATATAGATATTGCCTAACTAACTAAATTCTAGTCTATTTTAACGTACTACCAAGCTCTGCGATGCGACTAAGCTTGTCTC 52 9478157 0.986191193 11 51 435 0.984848485 1.812913357 0.03030303 0.211538462 0.378787879 52 1 0 65 2R:9478117-9478210 7 Camta FBtr0339381 9477617 9480076 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 9478144 9478199 3'utr Camta FlyBase G10923.1 CTAACTAACTAAATTCTAGTCTATTTTAACGTACTACCAAGCTCTGCGATGCGACT 35 9478157 0.877909453 4 35 240 1 1.707570176 0.019607843 0.314285714 0.529411765 35 0 0 51 2R:9478144-9478199 7 31 1623 FBgn0259234 576.11 9.96 15.38666667 0.053809168 3.112449799 2.014731369 1 1 1 0.15 dme-miR-184-3p 8mer-A1 TCCGTCCA 2R 9478755 9478762 + 2R_9478755_9478762_+ 0.631104976 0.631134922 0.631119949 2.11E-05 Camta FBtr0339381 9477617 9480076 2R + 9478746 9478789 3'utr Camta FlyBase G14349.1 TTATTTTTGTCCGTCCACATTGTTAGCTTTCATAACATACCAAC 6 9478751 0.990542169 4 4 50 0.875 0.84509804 0.25 0.166666667 0.375 6 1 0 7 2R:9478746-9478789 8 Camta FBtr0339381 9477617 9480076 TCCGTCCA 8mer-A1 dme-miR-184-3p 2R + 9478743 9478780 3'utr Camta FlyBase G10924.1 AAATTATTTTTGTCCGTCCACATTGTTAGCTTTCATAA 6 9478751 0.670195448 4 5 63 1 1 0.2 0.5 0.7 6 0 0 10 2R:9478743-9478780 8 5 1624 FBgn0259234 576.11 9.96 15.38666667 0.008678898 0.502008032 0.324956672 4 4 4 0.15 dme-miR-932-5p 7mer-A1 GAATTGA 2R 9566490 9566496 - 2R_9566490_9566496_- 0.477574969 0.46944385 0.473509409 0.005749627 Not1 FBtr0304957 9566144 9567977 2R - 9566272 9566682 3'utr Not1 FlyBase G21396.2 TCGAATCTAAATTCATTATCCTACGTTAGGCAATTTGCGAGTTATGTATGTACATGTACGTGTTATTCAGTCCCTCATTCACTCGACACTCAGCAGCCTGCAGCAAAGCAACTCTATTAGTTTTTAGTCTACCGCAAATGAACATTCATTGTATTTACGCAAGTCAAATCTATTTTGAATTAAACTGAATTGAAGCCTGAAGCCGAGCAAAGTGCACATGTAGAAAGCGAGAGAGAGGAGAGTAGAGAGTAGATGATGGAAGAAGGGCTAGCTTTTTAGCCAAAGGCCCAACTCATTTATAGACTAATTCCGTTTGCAATGGCTAAGAAGTATGTATATGATGGATGTACAGACATTCGTTCACCGATCGACCGACACATTCATAAACGAAAGCTGCGACACAAGAAACCA 316 9566493 0.958071144 54 295 1586 0.931232092 2.034762106 0.140401146 0.091772152 0.17765043 316 22 2 325 2R:9566272-9566682 7 Not1 FBtr0304957 9566144 9567977 GAATTGA 7mer-A1 dme-miR-932-5p 2R - 9566410 9566513 3'utr Not1 FlyBase G16233.1 CTATTTTGAATTAAACTGAATTGAAGCCTGAAGCCGAGCAAAGTGCACATGTAGAAAGCGAGAGAGAGGAGAGTAGAGAGTAGATGATGGAAGAAGGGCTAGCT 110 9566493 0.742294772 10 104 419 0.961538462 1.698970004 0.205128205 0.336363636 0.532051282 110 4 2 150 2R:9566410-9566513 7 115.5 1625 FBgn0085436 10306.14667 124.2833333 191.6566667 0.011206904 0.929328148 0.602640138 -3 -3 -3 0.15 dme-bantam-3p 6mer3-8 TGATCT 2R 9567052 9567057 - 2R_9567052_9567057_- 0.994154109 0.996938088 0.995546098 0.001968585 Not1 FBtr0304957 9566144 9567977 2R - 9566889 9567095 3'utr Not1 FlyBase G21398.1 AGCAGCCACTGCAACATTAACCAGAACCAACCAATGTTTGATCTTCTTATACGCAATATAAGCGATACGTTTTGTTTTAACCTACATTATTTTATGAACTGATTATTAACTGAAATGGAAATACATTGAACACATCTAGCTTGTTAAACGTATAATCGATCCTCCATGTAAAGATAAACGCTGTTAGAATCAGATAGATGAGTGAAT 152 9567049 0.875676875 42 137 1205 0.90052356 1.457377197 0.120418848 0.230263158 0.387434555 152 14 5 172 2R:9566889-9567095 6 Not1 FBtr0304957 9566144 9567977 TGATCT 6mer3-8 dme-bantam-3p 2R - 9567018 9567092 3'utr Not1 FlyBase G16239.1 AGCCACTGCAACATTAACCAGAACCAACCAATGTTTGATCTTCTTATACGCAATATAAGCGATACGTTTTGTTTT 56 9567058 0.934499158 12 54 454 0.9625 1.886490725 0.0625 0.267857143 0.4875 56 3 0 77 2R:9567018-9567092 6 54 1626 FBgn0085436 10306.14667 124.2833333 191.6566667 0.005239592 0.434491082 0.281753831 -8 1 -3.5 0.15 dme-miR-2a-2-5p 7mer-m1 GATGAGG 2R 9567289 9567295 - 2R_9567289_9567295_- 0.825528261 0.825582161 0.825555211 3.81E-05 Not1 FBtr0304957 9566144 9567977 2R - 9567239 9567348 3'utr Not1 FlyBase G21400.1 CAAACCTACTCTCAACGCCGCTGAGAGCGATATTTATAGACGGTGAGCATGAGGATGAGGAGAGGAGGAGAAGGAGAAGCCGAGCAGAATGTTGAAAAGATCCTCAAGTC 18 9567313 0.934861369 11 18 65 1 1.278753601 0.473684211 0.055555556 0.105263158 18 0 0 19 2R:9567239-9567348 7 Not1 FBtr0304957 9566144 9567977 GATGAGG 7mer-m1 dme-miR-2a-2-5p 2R - 9567275 9567313 3'utr Not1 FlyBase G16240.1 ATAGACGGTGAGCATGAGGATGAGGAGAGGAGGAGAAGG 5 9567299 0.868858911 3 4 11 0.7 0.84509804 0 0.6 0.8 5 3 0 7 2R:9567275-9567313 7 6 1627 FBgn0085436 10306.14667 124.2833333 191.6566667 0.000582177 0.048276787 0.031305981 18 4 11 0.15 dme-miR-980-3p 6mer3-8 GGCAGC 2R 9567902 9567907 - 2R_9567902_9567907_- 0.999301041 0.999325956 0.999313498 1.77E-05 Not1 FBtr0339394|FBtr0112672|FBtr0112673|FBtr0112674|FBtr0304957 9567512|9567512|9567512|9567512|9566144 9567977|9567977|9567977|9567977|9567977 2R - 9567892 9567930 3'utr Not1 FlyBase G21404.1 CAGACGCAGGCAGTAGCTGCCTGGGCAGCACACCACCAC 11 9567912 0.799303279 3 11 22 1 1.079181246 0.416666667 0.090909091 0.166666667 11 0 0 12 2R:9567892-9567930 6 Not1 FBtr0112672|FBtr0112673|FBtr0112674|FBtr0304957|FBtr0339394 9567512|9567512|9567512|9566144|9567512 9567977|9567977|9567977|9567977|9567977 GGCAGC 6mer3-8 dme-miR-980-3p 2R - 9567901 9567931 3'utr Not1 FlyBase G16244.1 CCAGACGCAGGCAGTAGCTGCCTGGGCAGCA 6 9567910 0.7967343 2 6 12 1 0.954242509 0.111111111 0.333333333 0.555555556 6 0 0 9 2R:9567901-9567931 6 8.5 1628 FBgn0085436 10306.14667 124.2833333 191.6566667 0.000824751 0.068392115 0.04435014 5 3 4 0.15 dme-miR-12-5p 6mer2-7 ATACTC 2R 9592424 9592429 + 2R_9592424_9592429_+ 0.99997477 0.999994554 0.999984662 1.40E-05 Map60 FBtr0088530 9592414 9592744 2R + 9592373 9592472 stop_codon Map60 FlyBase G14377.1 GCGCGCCATCCTCGATGTGCAGAGCGACGAACTGGAGCAGTAGACCGACTGATACTCGCAATTTAAATGATTACTCAGCTTACTTATTAGACAAACTAAA 199 9592440 0.729808618 12 188 1148 0.946280992 1.757775491 0.02892562 0.201005025 0.342975207 199 10 3 229 2R:9592373-9592472 6 Map60 FBtr0088530 9592414 9592744 ATACTC 6mer2-7 dme-miR-12-5p 2R + 9592358 9592470 stop_codon Map60 FlyBase G10943.1 GGAGCTGTCCATCTTGCGCGCCATCCTCGATGTGCAGAGCGACGAACTGGAGCAGTAGACCGACTGATACTCGCAATTTAAATGATTACTCAGCTTACTTATTAGACAAACTA 124 9592423 0.970740122 15 117 674 0.956043956 1.763427994 0.098901099 0.338709677 0.549450549 124 6 2 174 2R:9592358-9592470 6 107.5 1629 FBgn0010342 1158.76 77.84 119.11 0.092771583 1.381038027 0.902527076 -16 1 -7.5 0.15 dme-miR-305-3p 7mer-m1 TGTGCCG 2R 9592554 9592560 + 2R_9592554_9592560_+ 0.825516502 0.825580058 0.82554828 4.50E-05 Map60 FBtr0088530 9592414 9592744 2R + 9592516 9592575 3'utr Map60 FlyBase G14378.1 TATCGTATTATTTTTTCCGTGTTCAAACGTCTGCGTTCTGTGCCGCCCACTTGTAAAATG 59 9592556 0.982674582 8 55 412 0.924242424 1.183269844 0.333333333 0.084745763 0.181818182 59 2 3 61 2R:9592516-9592575 7 Map60 FBtr0088530 9592414 9592744 TGTGCCG 7mer-m1 dme-miR-305-3p 2R + 9592528 9592579 3'utr Map60 FlyBase G10944.1 TTTTCCGTGTTCAAACGTCTGCGTTCTGTGCCGCCCACTTGTAAAATGTATT 56 9592555 0.783456265 9 50 383 0.840909091 1.392110465 0.238636364 0.392857143 0.613636364 56 12 2 74 2R:9592528-9592579 7 55 1630 FBgn0010342 1158.76 77.84 119.11 0.047464531 0.706577595 0.461758039 -2 -1 -1.5 0.15 dme-miR-317-3p 7mer-A1 GTGTTCA 2R 9592600 9592606 + 2R_9592600_9592606_+ 0.822999442 0.823340234 0.823169838 0.000240982 Map60 FBtr0088530 9592414 9592744 2R + 9592586 9592621 3'utr Map60 FlyBase G14379.1 CAGTTCTGGTATGAGTGTTCATAGCATTTACGCATG 12 9592597 0.805680015 3 12 103 1 1.113943352 0.307692308 0.083333333 0.153846154 12 0 0 13 2R:9592586-9592621 7 Map60 FBtr0088530 9592414 9592744 GTGTTCA 7mer-A1 dme-miR-317-3p 2R + 9592585 9592619 3'utr Map60 FlyBase G10945.1 ACAGTTCTGGTATGAGTGTTCATAGCATTTACGCA 6 9592596 0.714644962 3 4 42 0.6 0.954242509 0.133333333 1 1 6 6 0 9 2R:9592585-9592619 7 8.5 1631 FBgn0010342 1158.76 77.84 119.11 0.007335428 0.109198356 0.071362606 3 4 3.5 0.15 dme-miR-1002-5p 6mer3-8 CTACTT 2R 9592697 9592702 + 2R_9592697_9592702_+ 0.887673866 0.929222032 0.908447949 0.029378943 Map60 FBtr0088530 9592414 9592744 2R + 9592642 9592709 3'utr Map60 FlyBase G14380.1 AATGTATTTCTAATATTTGAGATTTCGAATTTGTCCCTATTTAAGGTTGAATATGCTACTTGATTTTA 13 9592694 0.989261666 7 12 127 0.941176471 1.204119983 0.058823529 0.230769231 0.411764706 13 1 0 16 2R:9592642-9592709 6 Map60 FBtr0088530 9592414 9592744 CTACTT 6mer3-8 dme-miR-1002-5p 2R + 9592643 9592713 3'utr Map60 FlyBase G10945.2 ATGTATTTCTAATATTTGAGATTTCGAATTTGTCCCTATTTAAGGTTGAATATGCTACTTGATTTTAAAAT 11 9592693 0.989272958 10 10 91 0.882352941 1.176091259 0 0.363636364 0.588235294 11 2 0 15 2R:9592643-9592713 6 6 1632 FBgn0010342 1158.76 77.84 119.11 0.005177949 0.077081192 0.050373604 3 4 3.5 0.15 dme-miR-33-5p 6mer2-7 AATGCA 2R 9605311 9605316 + 2R_9605311_9605316_+ 0.524918862 0.544295323 0.534607093 0.013701184 CG1902 FBtr0088531|FBtr0088532 9604941|9604941 9605624|9605624 2R + 9605263 9605331 3'utr CG1902 FlyBase G14388.2 TACACATTCTAACGTCCGGTCGAACGATTCATTCTACCATGATCCCATAATGCATTTTCATGATGAAAT 16 9605310 0.848544397 7 14 91 0.882352941 1.176091259 0.235294118 0.0625 0.117647059 16 2 0 15 2R:9605263-9605331 6 CG1902 FBtr0088531|FBtr0088532 9604941|9604941 9605624|9605624 AATGCA 6mer2-7 dme-miR-33-5p 2R + 9605288 9605314 3'utr CG1902 FlyBase G10949.1 GATTCATTCTACCATGATCCCATAATG 7 9605310 0.695002709 2 5 40 0.888888889 0.903089987 0.333333333 0.285714286 0.444444444 7 1 0 8 2R:9605288-9605314 4 8 1633 FBgn0033434 795.9833333 54.22333333 82.71333333 0.010050462 0.14753796 0.096719594 1 1 1 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 2R 9688649 9688655 - 2R_9688649_9688655_- 0.6201895 0.606298011 0.613243756 0.009822774 Uba1 FBtr0339517|FBtr0088499 9688287|9688287 9688767|9688767 2R - 9688527 9688676 3'utr Uba1 FlyBase G21476.2 AGGAGTTACTGTCTAGCTGTTTGCATTTTAATTTTCACAACACCATTACGAGAGCAGCCCAGATCTAGAAATTATATAAAATGTGTGTGAATCCTCTAAGGAATGGCAAAATAATACGCATCATACGAAATACAAAGACTCGACTAAAAG 33 9688656 0.978934507 14 30 218 0.923076923 1.079181246 0.153846154 0.181818182 0.307692308 33 1 2 36 2R:9688527-9688676 7 Uba1 FBtr0339517|FBtr0088499 9688287|9688287 9688767|9688767 TGCATTT 7mer-m8 dme-miR-277-3p 2R - 9688569 9688727 3'utr Uba1 FlyBase G16298.1 GATCCCGTTTTGTTGTCGGCGACGCGTTTTGGAATCGCGCAGCTCCAACGAAGGAGTTACTGTCTAGCTGTTTGCATTTTAATTTTCACAACACCATTACGAGAGCAGCCCAGATCTAGAAATTATATAAAATGTGTGTGAATCCTCTAAGGAATGGCA 27 9688655 0.984298163 15 24 194 0.909090909 1.602059991 0.25 0.481481481 0.681818182 27 4 0 40 2R:9688569-9688727 7 9.5 1634 FBgn0023143 3506.563333 97.42 149.3233333 0.002709205 0.09751591 0.063620332 1 0 0.5 0.15 dme-miR-8-3p 6mer2-7 AGTATT 2R 9715158 9715163 + 2R_9715158_9715163_+ 0.899392293 0.679912661 0.789652477 0.155195513 dap FBtr0088469 9715082 9716256 2R + 9715072 9715164 stop_codon dap FlyBase G14408.1 CGCCACAACTAATGCTCCAGATTCGCTGGCCAACCCACCGAATTGCAATTTGTAATTTTATTTTTTACAAGCCACTGCGATTGTGTAGTATTT 29 9715153 0.777688983 9 27 179 0.942857143 1.217483944 0.2 0.172413793 0.314285714 29 1 1 33 2R:9715072-9715164 6 dap FBtr0088469 9715082 9716256 AGTATT 6mer2-7 dme-miR-8-3p 2R + 9715134 9715164 3'utr dap FlyBase G10959.1 TTTTACAAGCCACTGCGATTGTGTAGTATTT 18 9715153 0.717407267 3 16 119 0.9 1.130333768 0.133333333 0.555555556 0.733333333 18 2 1 27 2R:9715134-9715164 6 11.5 1635 FBgn0010316 804.5033333 38.63 59.20333333 0.014294534 0.297696091 0.194245819 5 5 5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2R 9715307 9715312 + 2R_9715307_9715312_+ 0.999248589 0.75918688 0.879217734 0.169749256 dap FBtr0088469 9715082 9716256 2R + 9715249 9715409 3'utr dap FlyBase G14410.1 CAGTAATTAGTTGTAAGTCAACCAGTAAGCTCGAGCTAAATGAAACTTTTTAGATTTCTCTAGTGAGAAATGCCATAAACTAAGTGATTAGTTCTTAACAACAAACAACTATTGAACAAGAAGAGAGAGACCGCAAGCTAAATGGAATTAGTCTTAACTAT 58 9715304 0.970822335 21 44 346 0.757142857 1.72427587 0.171428571 0.189655172 0.328571429 58 17 0 53 2R:9715249-9715409 6 dap FBtr0088469 9715082 9716256 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 9715184 9715417 3'utr dap FlyBase G10960.1 CCTTTTTATGCAGTGCAAGGGCGACAGTTGCGAATATTAATCGTTAGTCTTCAACTACTCGTAACCAGTAATTAGTTGTAAGTCAACCAGTAAGCTCGAGCTAAATGAAACTTTTTAGATTTCTCTAGTGAGAAATGCCATAAACTAAGTGATTAGTTCTTAACAACAAACAACTATTGAACAAGAAGAGAGAGACCGCAAGCTAAATGGAATTAGTCTTAACTATCTTGAAGC 58 9715297 0.980317788 26 51 362 0.886075949 1.84509804 0.075949367 0.344827586 0.518987342 58 9 0 70 2R:9715184-9715417 6 14.5 1636 FBgn0010316 804.5033333 38.63 59.20333333 0.018023542 0.375355941 0.244918642 3 10 6.5 0.15 dme-bantam-3p 7mer-m8 TGATCTC 2R 9715858 9715864 + 2R_9715858_9715864_+ 0.661615243 0.661615243 0.661615243 0 dap FBtr0088469 9715082 9716256 2R + 9715780 9715955 3'utr dap FlyBase G14412.1 TGAATGCCGCCGAATGGACACAAATTGTCGCGCTCTCATTTCTTAACCAGTGCTAAAAATGTCTTTTATGATTTGCTATGATCTCTGGGCAAATTATGAAAACAATTTTGCCTGAAACTATCATGTACAAAAACTAGATTATTATACATACTATACACATAGGCAGAGCCTATTCT 1243 9715858 0.984773314 31 1202 9666 0.966003849 1.922552467 0.050032072 0.201930813 0.363694676 1243 36 17 1506 2R:9715780-9715955 7 dap FBtr0088469 9715082 9716256 TGATCTC 7mer-m8 dme-bantam-3p 2R + 9715780 9715926 3'utr dap FlyBase G10962.1 TGAATGCCGCCGAATGGACACAAATTGTCGCGCTCTCATTTCTTAACCAGTGCTAAAAATGTCTTTTATGATTTGCTATGATCTCTGGGCAAATTATGAAAACAATTTTGCCTGAAACTATCATGTACAAAAACTAGATTATTATAC 818 9715858 0.941397623 28 782 6291 0.955028618 2.026050158 0.061324612 0.376528117 0.582992641 818 45 10 1168 2R:9715780-9715926 7 930 1637 FBgn0010316 804.5033333 38.63 59.20333333 1.155992724 24.07455346 15.70857497 0 0 0 0.15 dme-miR-8-3p 6mer2-7 AGTATT 2R 9716011 9716016 + 2R_9716011_9716016_+ 0.884301688 0.88975475 0.887028219 0.003855924 dap FBtr0088469 9715082 9716256 2R + 9715986 9716053 3'utr dap FlyBase G14413.1 AAGGCCTAACTAAGAACAAATCCAAAGTATTCTCCTAATATTTATATGTATAGACACTCTATGTATAA 30 9716014 0.942748006 7 29 168 0.96875 1.491361694 0.03125 0.066666667 0.125 30 1 0 31 2R:9715986-9716053 6 dap FBtr0088469 9715082 9716256 AGTATT 6mer2-7 dme-miR-8-3p 2R + 9715982 9716029 3'utr dap FlyBase G10963.1 TTGTAAGGCCTAACTAAGAACAAATCCAAAGTATTCTCCTAATATTTA 21 9716014 0.968472255 7 19 106 0.862068966 0.920818754 0 0.285714286 0.482758621 21 2 2 25 2R:9715982-9716029 6 21.5 1638 FBgn0010316 804.5033333 38.63 59.20333333 0.026724563 0.556562257 0.363155228 -3 -3 -3 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2R 9845106 9845112 + 2R_9845106_9845112_+ 0.82176663 0.820545669 0.821156149 0.000863307 CG1667 FBtr0345019|FBtr0345020 9845083|9845083 9845512|9845512 2R + 9845001 9845170 stop_codon CG1667 FlyBase G14436.1 AAGGGCAACCTGGTGGATGTTGGCGAATTGCTTGTAGCTCATATGCAAAACAAAACCAAAACTATTGACGAAATTTCCAACTAAGACTTGAAATCAAAAACGATTCCAAAGATTACGTTTTTTAATAATATATATCTATATATTGTAGTAATACCAAATTATTCTAGTTT 156 9845104 0.857336545 20 148 830 0.952631579 1.78055732 0.036842105 0.198717949 0.342105263 156 7 2 181 2R:9845001-9845170 7 CG1667 FBtr0345019|FBtr0345020 9845083|9845083 9845512|9845512 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 9844999 9845127 stop_codon CG1667 FlyBase G10980.1 GCAAGGGCAACCTGGTGGATGTTGGCGAATTGCTTGTAGCTCATATGCAAAACAAAACCAAAACTATTGACGAAATTTCCAACTAAGACTTGAAATCAAAAACGATTCCAAAGATTACGTTTTTTAATA 107 9845104 0.95303902 15 105 488 0.97515528 2.195899652 0.043478261 0.345794393 0.565217391 107 4 0 157 2R:9844999-9845127 7 83 1639 FBgn0033453 439.85 39.39 60.12 0.188700693 2.10713379 1.380572189 2 2 2 0.15 dme-miR-304-5p 6mer2-7 GAGATT 2R 9850774 9850779 - 2R_9850774_9850779_- 0.944109712 0.950164555 0.947137133 0.004281461 CG1516 FBtr0088457|FBtr0088460|FBtr0088459|FBtr0088454|FBtr0088455|FBtr0088462|FBtr0088458|FBtr0088461|FBtr0088456|FBtr0300850 9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701 9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136 2R - 9850753 9850803 3'utr CG1516 FlyBase G21511.1 TTTTAATTCGCAAACACCTGTGTCGAGATTCCCCCTCTAGTAAATACGTAA 26 9850775 0.768568444 5 25 162 0.972222222 1.544068044 0.361111111 0.307692308 0.5 26 1 0 35 2R:9850753-9850803 6 CG1516 FBtr0088456|FBtr0300850|FBtr0088455|FBtr0088462|FBtr0088458|FBtr0088461|FBtr0088459|FBtr0088454|FBtr0088457|FBtr0088460 9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701 9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136 GAGATT 6mer2-7 dme-miR-304-5p 2R - 9850750 9850796 3'utr CG1516 FlyBase G16335.1 TCGCAAACACCTGTGTCGAGATTCCCCCTCTAGTAAATACGTAAGTG 17 9850775 0.962663073 4 17 99 1 1.397940009 0.12 0.352941176 0.56 17 0 0 25 2R:9850750-9850796 6 20.5 1640 FBgn0027580 357.3333333 9.89 15.28666667 0.057369403 2.072800809 1.341037942 -4 -4 -4 0.15 dme-miR-184-5p 6mer3-8 TGATAA 2R 9851055 9851060 - 2R_9851055_9851060_- 0.986590619 0.996349253 0.991469936 0.006900443 CG1516 FBtr0088457|FBtr0088460|FBtr0088459|FBtr0088454|FBtr0088455|FBtr0088462|FBtr0088458|FBtr0088461|FBtr0088456|FBtr0300850 9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701 9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136 2R - 9850989 9851089 3'utr CG1516 FlyBase G21513.1 ACACCCAATGTAAAATTAAGTGAAAACAGTGATAATCTTAGGGACTCTGTCAGTTCGATTGATCATAAAACTGTCCAAAGTCGCCTGTGTCTATTTTTATA 25 9851069 0.98500596 9 20 167 0.821428571 1.361727836 0.071428571 0.166666667 0.285714286 24 5 0 23 2R:9850989-9851089 6 CG1516 FBtr0088456|FBtr0300850|FBtr0088455|FBtr0088462|FBtr0088458|FBtr0088461|FBtr0088459|FBtr0088454|FBtr0088457|FBtr0088460 9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701 9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136 TGATAA 6mer3-8 dme-miR-184-5p 2R - 9851051 9851103 3'utr CG1516 FlyBase G16337.2 AGCTGCCACCGCACACACCCAATGTAAAATTAAGTGAAAACAGTGATAATCTT 14 9851069 0.975918626 5 12 72 0.9 1.255272505 0.05 0.357142857 0.55 14 2 0 18 2R:9851051-9851103 6 14.5 1641 FBgn0027580 357.3333333 9.89 15.28666667 0.040578358 1.466127401 0.948539032 9 9 9 0.15 dme-miR-277-3p 6mer3-8 TGCATT 2R 9876442 9876447 - 2R_9876442_9876447_- 0.631985247 0.997845264 0.814915255 0.258702158 Sec24AB FBtr0339406|FBtr0088451|FBtr0339407 9876230|9876230|9876230 9877125|9877125|9877125 2R - 9876409 9876517 3'utr Sec24AB FlyBase G21535.1 GAAAGGCGTTTTGTTGCACTGTAGTTAGCGAACTTATTTCAAACGTATGTACGGATTTGGTATTGTGTATTGCATTCATTGGACTGCTAGGCAGTGAATGTCTTAAGCT 69 9876438 0.732930427 18 68 583 0.986666667 1.568201724 0.24 0.072463768 0.146666667 69 0 1 74 2R:9876409-9876517 6 Sec24AB FBtr0339407|FBtr0088451|FBtr0339406 9876230|9876230|9876230 9877125|9877125|9877125 TGCATT 6mer3-8 dme-miR-277-3p 2R - 9876291 9876548 3'utr Sec24AB FlyBase G16349.1 AGAGAAATCTATATTTATTTATAAGTGTAAGGAAAGGCGTTTTGTTGCACTGTAGTTAGCGAACTTATTTCAAACGTATGTACGGATTTGGTATTGTGTATTGCATTCATTGGACTGCTAGGCAGTGAATGTCTTAAGCTTAGAAGGAATATTATACTGTATCAATAAAGAGACCCCATCCCTGTACCTCAGGTGGCGCAGTTGTCGTTCTTTGAGTGGGCTAACTAATCGAAAAACCATATACAAATACTGTACCAT 71 9876438 0.984972783 17 68 552 0.973451327 2.041392685 0.17699115 0.408450704 0.628318584 71 3 0 110 2R:9876291-9876548 6 48.5 1642 FBgn0033460 661.8766667 16.61 25.35 0.073276492 2.919927754 1.91321499 -9 -9 -9 0.15 dme-miR-1012-3p 6mer2-7 TGACTA 2R 9877042 9877047 - 2R_9877042_9877047_- 0.996211599 0.998927241 0.99756942 0.001920219 Sec24AB FBtr0339406|FBtr0088451|FBtr0339407 9876230|9876230|9876230 9877125|9877125|9877125 2R - 9876985 9877145 stop_codon Sec24AB FlyBase G21539.1 TTCGGGCTCAGGTTAAATAGTATATAAGCAGGATATCCTACCACTATTGTATGCAGCATAAATACGAGTTTCTAAGAACCTAAAAACTCAGACTCTGGTGACTAGAAGCACGAAGCGAATGCAGGTGACACTGGTGCGAAACAATGGAGACCAGTTCGGGA 45 9877050 0.997688203 14 44 226 0.980392157 1.698970004 0.078431373 0.133333333 0.235294118 45 1 0 50 2R:9876985-9877145 6 Sec24AB FBtr0339407|FBtr0088451|FBtr0339406 9876230|9876230|9876230 9877125|9877125|9877125 TGACTA 6mer2-7 dme-miR-1012-3p 2R - 9877003 9877122 3'utr Sec24AB FlyBase G16352.1 ATAAGCAGGATATCCTACCACTATTGTATGCAGCATAAATACGAGTTTCTAAGAACCTAAAAACTCAGACTCTGGTGACTAGAAGCACGAAGCGAATGCAGGTGACACTGGTGCGAAACA 39 9877050 0.865125135 13 36 188 0.966666667 1.763427994 0.15 0.358974359 0.583333333 39 2 0 58 2R:9877003-9877122 6 17.5 1643 FBgn0033460 661.8766667 16.61 25.35 0.026439971 1.053582179 0.690335306 3 3 3 0.15 dme-miR-965-3p 7mer-m8 TACGCTT 2R 9882784 9882790 - 2R_9882784_9882790_- 0.612285793 0.603655447 0.60797062 0.006102614 CG1513 FBtr0331955|FBtr0088450|FBtr0302176 9882570|9882570|9882570 9883756|9883756|9884080 2R - 9882753 9882843 3'utr CG1513 FlyBase G21563.1 TCTACCGACTACTCTCACGCAAAGTTAACGCAAAATGAAACGAATAAAGTAAATACGCTTCGAAATTGATTTAAAGTAATATTTAACGAAC 32 9882790 0.957203199 6 31 151 0.976190476 1.612783857 0.333333333 0.21875 0.404761905 32 1 0 41 2R:9882753-9882843 7 CG1513 FBtr0088450|FBtr0302176|FBtr0331955 9882570|9882570|9882570 9883756|9884080|9883756 TACGCTT 7mer-m8 dme-miR-965-3p 2R - 9882769 9882803 3'utr CG1513 FlyBase G16371.1 CGAATAAAGTAAATACGCTTCGAAATTGATTTAAA 17 9882790 0.838328462 2 16 77 0.925925926 1.397940009 0.333333333 0.411764706 0.62962963 17 2 0 25 2R:9882769-9882803 7 21.5 1644 FBgn0033463 1345.3 46.16 70.75666667 0.015981565 0.465771231 0.303858294 0 0 0 0.15 dme-miR-1007-3p 6mer3-8 TGAGCT 2R 9916217 9916222 - 2R_9916217_9916222_- 0.98635383 0.9994089 0.992881365 0.00923135 Mef2 FBtr0330707|FBtr0088445|FBtr0330708|FBtr0088444|FBtr0088446|FBtr0088447|FBtr0088443 9915500|9913494|9915500|9916116|9916116|9913494|9916116 9916745|9916745|9916454|9916745|9916745|9916745|9916745 2R - 9916195 9916232 3'utr Mef2 FlyBase G21585.1 GTTAGAGTGTTGAGCTGATTTAGTTTAGTTACAATTAC 6 9916214 0.706100947 4 6 63 1 1.041392685 0.909090909 0.5 0.727272727 6 0 0 11 2R:9916195-9916232 6 Mef2 FBtr0088446|FBtr0088447|FBtr0088443|FBtr0330707|FBtr0088445|FBtr0330708|FBtr0088444 9916116|9913494|9916116|9915500|9913494|9915500|9916116 9916745|9916745|9916745|9916745|9916745|9916454|9916745 TGAGCT 6mer3-8 dme-miR-1007-3p 2R - 9916201 9916234 3'utr Mef2 FlyBase G16385.1 ATGTTAGAGTGTTGAGCTGATTTAGTTTAGTTAC 9 9916222 0.776739322 4 7 106 0.733333333 0.740362689 0.6 0.555555556 0.733333333 9 3 1 11 2R:9916201-9916234 6 6.5 1645 FBgn0011656 531.1733333 15.92 24.39333333 0.01223706 0.408291457 0.266466248 -8 0 -4 0.15 dme-miR-307a-3p 6mer2-7 GTTGTG 2R 9962774 9962779 + 2R_9962774_9962779_+ 0.754036207 0.835075454 0.794555831 0.057303439 Pal1 FBtr0339422 9962739 9963031 2R + 9962747 9962821 3'utr Pal1 FlyBase G14480.2 GTGCTAACTCCTCACTCAATGTCCTGTGTTGTGCTGTCACACTTAACTGATTTAGTGTCCTGTACTTATAAGCTC 174 9962766 0.820377491 19 165 1679 0.955445545 1.507406059 0.173267327 0.137931034 0.257425743 174 4 5 193 2R:9962747-9962821 6 Pal1 FBtr0339422 9962739 9963031 GTTGTG 6mer2-7 dme-miR-307a-3p 2R + 9962747 9962821 3'utr Pal1 FlyBase G11011.1 GTGCTAACTCCTCACTCAATGTCCTGTGTTGTGCTGTCACACTTAACTGATTTAGTGTCCTGTACTTATAAGCTC 98 9962766 0.809110673 16 95 910 0.981707317 1.90579588 0.18902439 0.428571429 0.658536585 98 2 1 161 2R:9962747-9962821 6 109 1646 FBgn0033466 329.6666667 20.27 30.62666667 0.330637007 5.377405032 3.558989987 8 8 8 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 9962909 9962915 + 2R_9962909_9962915_+ 0.661615149 0.661615645 0.661615397 3.54E-07 Pal1 FBtr0339422 9962739 9963031 2R + 9962864 9962930 3'utr Pal1 FlyBase G14481.1 ACGCTTTTTTTGGTGTCGTTAATTACACAGCATGTCCACTTCTTGTGTGTTCTGTATTCGTTGGCTT 14 9962916 0.659987744 6 13 153 0.944444444 1.230448921 0.055555556 0.142857143 0.333333333 14 1 0 17 2R:9962864-9962930 7 Pal1 FBtr0339422 9962739 9963031 TGTGTTC 7mer-m8 dme-miR-317-3p 2R + 9962890 9962948 3'utr Pal1 FlyBase G11012.1 ACAGCATGTCCACTTCTTGTGTGTTCTGTATTCGTTGGCTTACTTTTCGTTCAACTTTA 17 9962907 0.992088512 7 14 165 1 1.397940009 0 0.352941176 0.56 17 0 0 25 2R:9962890-9962948 7 11 1647 FBgn0033466 329.6666667 20.27 30.62666667 0.033367037 0.542673902 0.359164127 -7 2 -2.5 0.15 dme-miR-252-5p 6mer3-8 GTACTT 3L 10220647 10220652 - 3L_10220647_10220652_- 0.997635459 0.993716591 0.995676025 0.002771081 scramb1 FBtr0076301|FBtr0076303|FBtr0076302 10220483|10220483|10220481 10221072|10221072|10221072 3L - 10220625 10220693 3'utr scramb1 FlyBase G35927.1 GAAGCGACAACTAACTAACGAATGATTCGTTATTGAAACATGTACTTTAAACTGTATGTTAAGTGTCTT 16 10220653 0.942159545 6 14 136 0.944444444 1.230448921 0.111111111 0.125 0.222222222 16 1 0 17 3L:10220625-10220693 6 scramb1 FBtr0076302|FBtr0076303|FBtr0076301 10220481|10220483|10220483 10221072|10221072|10221072 GTACTT 6mer3-8 dme-miR-252-5p 3L - 10220629 10220704 3'utr scramb1 FlyBase G27180.1 ATTGATGCTCTGAAGCGACAACTAACTAACGAATGATTCGTTATTGAAACATGTACTTTAAACTGTATGTTAAGTG 11 10220653 0.989309492 6 11 101 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 3L:10220629-10220704 6 9.5 1648 FBgn0052056 455.3333333 27.11666667 41.42333333 0.020863836 0.350338045 0.229339342 1 1 1 0.15 dme-miR-79-3p 7mer-A1 AGCTTTA 3L 10220719 10220725 - 3L_10220719_10220725_- 0.823325163 0.822058305 0.822691734 0.000895834 scramb1 FBtr0076301|FBtr0076303|FBtr0076302 10220483|10220483|10220481 10221072|10221072|10221072 3L - 10220711 10220742 3'utr scramb1 FlyBase G35928.1 GTATTCAACGACAAATCAGCTTTATTTATGAA 8 10220727 0.970590523 2 8 50 1 1.041392685 0.181818182 0.25 0.454545455 8 0 0 11 3L:10220711-10220742 7 scramb1 FBtr0076302|FBtr0076303|FBtr0076301 10220481|10220483|10220483 10221072|10221072|10221072 AGCTTTA 7mer-A1 dme-miR-79-3p 3L - 10220706 10220758 3'utr scramb1 FlyBase G27181.1 CAATTACTTGTGTAAAGTATTCAACGACAAATCAGCTTTATTTATGAATTTTG 14 10220727 0.962669746 4 13 102 1 1.278753601 0.157894737 0.214285714 0.421052632 14 0 0 19 3L:10220706-10220758 7 10 1649 FBgn0052056 455.3333333 27.11666667 41.42333333 0.021961933 0.36877689 0.241409833 2 2 2 0.15 dme-miR-2a-2-5p 6mer3-8 TGATGA 3L 10220846 10220851 - 3L_10220846_10220851_- 0.97610426 0.402866137 0.689485198 0.405340618 scramb1 FBtr0076301|FBtr0076303|FBtr0076302 10220483|10220483|10220481 10221072|10221072|10221072 3L - 10220793 10220856 3'utr scramb1 FlyBase G35929.1 AATTTTGATGAACATACTGAACTCAGGCTTCCTTCGAGAGGACATTGCCAGAATATAAAACTAA 15 10220839 0.850880838 8 14 83 0.9 1.255272505 0.35 0.333333333 0.5 15 2 0 18 3L:10220793-10220856 6 scramb1 FBtr0076302|FBtr0076303|FBtr0076301 10220481|10220483|10220483 10221072|10221072|10221072 TGATGA 6mer3-8 dme-miR-2a-2-5p 3L - 10220781 10220870 3'utr scramb1 FlyBase G27182.1 TGAAACTCCTTGTTAATTTTGATGAACATACTGAACTCAGGCTTCCTTCGAGAGGACATTGCCAGAATATAAAACTAACTTTAAGTTAGC 14 10220839 0.972983514 7 14 82 1 1.301029996 0.4 0.357142857 0.55 14 0 0 20 3L:10220781-10220870 6 7 1650 FBgn0052056 455.3333333 27.11666667 41.42333333 0.015373353 0.258143823 0.168986883 -12 -12 -12 0.15 dme-miR-7-5p 6mer3-8 GTCTTC 3L 10220909 10220914 - 3L_10220909_10220914_- 0.998941815 0.998457861 0.998699838 0.000342169 scramb1 FBtr0076301|FBtr0076303|FBtr0076302 10220483|10220483|10220481 10221072|10221072|10221072 3L - 10220890 10220952 3'utr scramb1 FlyBase G35930.1 TTTATCCAAATATCTTCCCGGTGAACTGTCGCGTACTAGTCTTCTGTACCAAATGCTTATTGA 34 10220911 0.709349063 7 31 253 0.976744186 1.62324929 0.139534884 0.264705882 0.418604651 34 1 0 42 3L:10220890-10220952 6 scramb1 FBtr0076302|FBtr0076303|FBtr0076301 10220481|10220483|10220483 10221072|10221072|10221072 GTCTTC 6mer3-8 dme-miR-7-5p 3L - 10220894 10220944 3'utr scramb1 FlyBase G27183.1 AATATCTTCCCGGTGAACTGTCGCGTACTAGTCTTCTGTACCAAATGCTTA 27 10220910 0.969422433 3 27 207 1 1.662757832 0.173913043 0.444444444 0.673913043 27 0 0 46 3L:10220894-10220944 6 27 1651 FBgn0052056 455.3333333 27.11666667 41.42333333 0.059297218 0.995697603 0.65180655 -3 -4 -3.5 0.15 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 10591542 10591549 + 3L_10591542_10591549_+ 0.668730529 0.668728245 0.668729387 1.63E-06 A2bp1 FBtr0305093|FBtr0305096|FBtr0332985|FBtr0305095 10590564|10590564|10590564|10590564 10593403|10593403|10594012|10594012 3L + 10591502 10591688 5'utr A2bp1 FlyBase G29412.1 AATGCATTGCTTGGTTGTTCCTAATAATTTTATATATTTTGGCAGCTAAAACCACTCACACTCAACTCACGACTCAATTCGAATTGCTCAAAAAAAAATCGTAGCGCATAGGTAAATGCAAAAGATCAACACGTAGACATATCCTTGGAATATACAATAATATTTACTTTAAATGCCGCCATAGCAG 121 10591541 0.983832149 19 112 862 0.927631579 1.848189117 0.019736842 0.214876033 0.375 121 10 1 141 3L:10591502-10591688 8 A2bp1 FBtr0305095|FBtr0332985|FBtr0305096|FBtr0305093 10590564|10590564|10590564|10590564 10594012|10594012|10593403|10593403 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L + 10591502 10591564 5'utr A2bp1 FlyBase G22256.1 AATGCATTGCTTGGTTGTTCCTAATAATTTTATATATTTTGGCAGCTAAAACCACTCACACTC 74 10591541 0.769587865 12 67 530 0.919191919 1.658011397 0 0.256756757 0.444444444 74 7 1 91 3L:10591502-10591564 8 82.5 1652 FBgn0052062 354.2866667 11.58666667 17.8 0.232862277 7.120253165 4.634831461 1 1 1 0.15 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 10592110 10592117 + 3L_10592110_10592117_+ 0.668730077 0.668732104 0.66873109 1.41E-06 A2bp1 FBtr0305093|FBtr0305096|FBtr0332985|FBtr0305095 10590564|10590564|10590564|10590564 10593403|10593403|10594012|10594012 3L + 10592071 10592136 5'utr A2bp1 FlyBase G29413.1 ATGCTCAATGGAAAATAAGCGAACAAACTTTGATTCTTAGGCAGCTACTGTCGTCAAATTTAAACT 76 10592108 0.988454678 11 69 628 0.913978495 1.327358934 0.161290323 0.197368421 0.344086022 76 5 3 85 3L:10592071-10592136 8 A2bp1 FBtr0305095|FBtr0332985|FBtr0305096|FBtr0305093 10590564|10590564|10590564|10590564 10594012|10594012|10593403|10593403 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L + 10592087 10592133 5'utr A2bp1 FlyBase G22258.1 AAGCGAACAAACTTTGATTCTTAGGCAGCTACTGTCGTCAAATTTAA 56 10592108 0.800372247 9 51 483 0.93258427 1.618048097 0.247191011 0.428571429 0.640449438 56 5 1 83 3L:10592087-10592133 8 65 1653 FBgn0052062 354.2866667 11.58666667 17.8 0.183467249 5.609896433 3.651685393 2 2 2 0.15 dme-miR-1003-3p 6mer2-7 TGTGAG 3L 10641055 10641060 - 3L_10641055_10641060_- 0.997328707 0.992192805 0.994760756 0.00363163 CG32066 FBtr0076278|FBtr0076277 10640284|10640414 10641200|10641200 3L - 10640962 10641079 3'utr CG32066 FlyBase G35946.1 TGTATTATTTGTAAAAAATTGTGAGCGAGTGTTGTGCTAGCAGGAGGCAACCTCTAGTTTTATTTTTACCCTGTGTGCATTTCCAGCATTTGTTTCGTACTGTTTTAGACTCCAGCCT 65 10641061 0.947171997 9 61 465 0.951219512 1.892094603 0.146341463 0.169230769 0.341463415 65 4 0 78 3L:10640962-10641079 6 CG32066 FBtr0076277|FBtr0076278 10640414|10640284 10641200|10641200 TGTGAG 6mer2-7 dme-miR-1003-3p 3L - 10641035 10641085 3'utr CG32066 FlyBase G27193.1 GGCTTCTGTATTATTTGTAAAAAATTGTGAGCGAGTGTTGTGCTAGCAGGA 52 10641061 0.75648163 6 47 369 0.884615385 1.838849091 0.205128205 0.423076923 0.615384615 52 9 0 69 3L:10641035-10641085 6 53 1654 FBgn0052066 3082.423333 164.4233333 252.2266667 0.017194264 0.322338679 0.210128456 1 1 1 0.15 dme-miR-283-5p 8mer-m1 TGATATTT 3L 10664398 10664405 + 3L_10664398_10664405_+ 0.536603373 0.555527606 0.54606549 0.01338143 CG32068 FBtr0113421 10664364 10664435 3L + 10664374 10664433 3'utr CG32068 FlyBase G29436.1 AATCTTATCTTTTACCATCAAGTTTGATATTTTGAAATATAAAATCGCTGTGTATAATCA 21 10664397 0.793768151 8 20 189 0.96 1.380211242 0.2 0.095238095 0.24 21 1 0 24 3L:10664374-10664433 8 CG32068 FBtr0113421 10664364 10664435 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 10664382 10664415 3'utr CG32068 FlyBase G22277.1 CTTTTACCATCAAGTTTGATATTTTGAAATATAA 8 10664397 0.757373083 3 6 72 0.818181818 0.954242509 0.090909091 0.375 0.545454545 8 2 0 9 3L:10664382-10664415 8 10 1655 FBgn0052068 230.5566667 42.00666667 63.54666667 0.043373285 0.238057451 0.157364666 1 1 1 0.15 dme-miR-33-5p 7mer-A1 AATGCAA 3L 10689467 10689473 + 3L_10689467_10689473_+ 0.774444434 0.774774599 0.774609517 0.000233487 simj FBtr0331574 10689109 10690734 3L + 10689391 10689493 3'utr simj FlyBase G29447.1 AGTTTCCCTTTTTGTTACACCACTGCATTACATATTTTAATTAATTTGCCAGCCAGAATATAGCAGCCGATAAATGAATGCAAACTTTTAAGCTCCTAGTAAT 53 10689465 0.965463571 9 51 279 0.96875 1.792391689 0.046875 0.169811321 0.3125 53 2 0 62 3L:10689391-10689493 7 simj FBtr0331574 10689109 10690734 AATGCAA 7mer-A1 dme-miR-33-5p 3L + 10689450 10689490 3'utr simj FlyBase G22282.1 ATAGCAGCCGATAAATGAATGCAAACTTTTAAGCTCCTAGT 19 10689465 0.839271138 2 18 96 0.935483871 0.985276743 0 0.473684211 0.677419355 19 0 2 29 3L:10689450-10689490 7 32.5 1656 FBgn0010762 1928.513333 47.80333333 73.36666667 0.01685236 0.679868907 0.442980463 2 2 2 0.15 dme-miR-995-5p 6mer3-8 AATTCG 3L 10689723 10689728 + 3L_10689723_10689728_+ 0.736092462 0.972081678 0.85408707 0.166869564 simj FBtr0331574 10689109 10690734 3L + 10689710 10689756 3'utr simj FlyBase G29449.1 AATTTTGTCGTACAATTCGTTTAGTTCTTAGCATCGTGAATAAATCT 14 10689725 0.792464415 7 12 137 0.866666667 1.113943352 0 0.071428571 0.133333333 14 2 0 13 3L:10689710-10689756 6 simj FBtr0331574 10689109 10690734 AATTCG 6mer3-8 dme-miR-995-5p 3L + 10689710 10689757 3'utr simj FlyBase G22284.1 AATTTTGTCGTACAATTCGTTTAGTTCTTAGCATCGTGAATAAATCTA 9 10689725 0.805875635 4 9 95 1 1.113943352 0 0.222222222 0.461538462 9 0 0 13 3L:10689710-10689757 6 9 1657 FBgn0010762 1928.513333 47.80333333 73.36666667 0.004666807 0.18827139 0.122671513 -2 -2 -2 0.15 dme-miR-283-5p 8mer-A1 TGATATTA 3L 10691907 10691914 + 3L_10691907_10691914_+ 0.592160451 0.591235873 0.591698162 0.000653791 CG11811 FBtr0076265 10691876 10692598 3L + 10691876 10691953 stop_codon CG11811 FlyBase G29452.1 AAGGCGAAGCATTTTGCGGACGAATGTAGAATGATATTAACCTCAATGGGGTGGGGGTAGAAATTGTTTGTGAACTGA 23 10691912 0.91703048 11 22 141 0.962962963 1.414973348 0.074074074 0.173913043 0.296296296 23 1 0 26 3L:10691876-10691953 8 CG11811 FBtr0076265 10691876 10692598 TGATATTA 8mer-A1 dme-miR-283-5p 3L + 10691847 10691956 stop_codon CG11811 FlyBase G22287.1 GAAGCAGGGAGTATCAGTTAACTTGAATTAAGGCGAAGCATTTTGCGGACGAATGTAGAATGATATTAACCTCAATGGGGTGGGGGTAGAAATTGTTTGTGAACTGATCG 29 10691922 0.974754139 12 28 172 0.953488372 1.612783857 0.093023256 0.379310345 0.581395349 29 2 0 41 3L:10691847-10691956 8 17 1658 FBgn0036099 1176.04 91.50333333 140.2833333 0.014455291 0.185785582 0.121183319 -5 -15 -10 0.15 dme-miR-932-5p 7mer-A1 GAATTGA 3L 10874507 10874513 + 3L_10874507_10874513_+ 0.813838655 0.81176482 0.812801737 0.001466469 tna FBtr0076268|FBtr0301658|FBtr0076267 10874466|10874466|10874466 10875743|10876496|10874646 3L + 10874486 10874619 5'utr tna FlyBase G29488.1 CGAAGCTGGGAGAGAGTTGGAGAATTGAAGTGGCAGAATACCATAAATTGTATATAGTATTATTAATTTTAATGAAATGTGCACTAGACGCCAGTCGCGTACTTCAACCAACATTTTCGTTTCCTCACACAAAC 225 10874503 0.799852762 23 203 1561 0.902040816 1.566241023 0.363265306 0.08 0.155102041 225 19 5 221 3L:10874486-10874619 7 tna FBtr0301658|FBtr0076267|FBtr0076268 10874466|10874466|10874466 10876496|10874646|10875743 GAATTGA 7mer-A1 dme-miR-932-5p 3L + 10874486 10874597 5'utr tna FlyBase G22312.1 CGAAGCTGGGAGAGAGTTGGAGAATTGAAGTGGCAGAATACCATAAATTGTATATAGTATTATTAATTTTAATGAAATGTGCACTAGACGCCAGTCGCGTACTTCAACCAAC 182 10874503 0.766769667 25 157 1145 0.88030888 1.579783597 0.498069498 0.324175824 0.525096525 182 26 5 228 3L:10874486-10874597 7 131.5 1659 FBgn0026160 929.45 23.40666667 36.18333333 0.141481521 5.618057533 3.634269922 4 4 4 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3L 10874758 10874764 + 3L_10874758_10874764_+ 0.320106029 0.368276736 0.344191382 0.034061829 tna FBtr0076268|FBtr0301658 10874466|10874466 10875743|10876496 3L + 10874687 10874816 5'utr tna FlyBase G29489.1 ATTACAAACAACACACTGGATGAGAAATCGAAGCGGAAATTTGAATTTGCCCGTGTTGAAAAACAATGAAATGTGATTTAAAAATTAATTAATTAAATTAATTGGCATTTAATTTAAAGCTAACTGAGAA 448 10874764 0.980464226 19 440 3252 0.984819734 2.414137362 0.024667932 0.149553571 0.277039848 448 7 1 519 3L:10874687-10874816 7 tna FBtr0301658|FBtr0076268 10874466|10874466 10876496|10875743 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 10874686 10874791 5'utr tna FlyBase G22313.1 TATTACAAACAACACACTGGATGAGAAATCGAAGCGGAAATTTGAATTTGCCCGTGTTGAAAAACAATGAAATGTGATTTAAAAATTAATTAATTAAATTAATTGG 341 10874764 0.982790011 16 330 2490 0.975609756 1.865301426 0.017738359 0.272727273 0.450110865 341 6 5 440 3L:10874686-10874791 7 373 1660 FBgn0026160 929.45 23.40666667 36.18333333 0.401312604 15.93563087 10.30861354 -6 -6 -6 0.15 dme-miR-79-3p 6mer3-8 TAGCTT 3L 10875278 10875283 + 3L_10875278_10875283_+ 0.999982861 0.999999999 0.99999143 1.21E-05 tna FBtr0076268|FBtr0301658 10874466|10874466 10875743|10876496 3L + 10875198 10875297 5'utr tna FlyBase G29492.1 AATGAAAACATTTACATTTTAATTGTTGCATAATTTTAATTATTTTTTAAAGCCTATCTACATATTAAAAGTAAATGATTTAGCTTGGTAAACGATAAAC 25 10875277 0.981358984 9 25 190 1 1.477121255 0.2 0.2 0.333333333 25 0 0 30 3L:10875198-10875297 6 tna FBtr0301658|FBtr0076268 10874466|10874466 10876496|10875743 TAGCTT 6mer3-8 dme-miR-79-3p 3L + 10875261 10875291 5'utr tna FlyBase G22317.1 ATTAAAAGTAAATGATTTAGCTTGGTAAACG 15 10875277 0.642842143 4 15 96 1 1.397940009 0.4 0.466666667 0.68 15 0 0 25 3L:10875261-10875291 6 17 1661 FBgn0026160 929.45 23.40666667 36.18333333 0.018290387 0.726288807 0.469829572 1 1 1 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3L 10895050 10895056 - 3L_10895050_10895056_- 0.279073781 0.282107638 0.28059071 0.002145221 Aps FBtr0076250|FBtr0076252 10894774|10894774 10896130|10896130 3L - 10895020 10895080 3'utr Aps FlyBase G35978.1 CGAAGAAGAGGAGCATGTTATCAATGTGATTTAAGAGATACAAGATACATACGAGTTAAAC 84 10895050 0.984960126 6 81 653 0.972222222 1.720159303 0.240740741 0.226190476 0.398148148 84 2 1 105 3L:10895020-10895080 7 Aps FBtr0076252|FBtr0076250 10894774|10894774 10896130|10896130 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 10895029 10895078 3'utr Aps FlyBase G27212.1 AAGAAGAGGAGCATGTTATCAATGTGATTTAAGAGATACAAGATACATAC 62 10895050 0.937353226 6 58 478 0.928571429 1.892094603 0.261904762 0.241935484 0.44047619 62 6 0 78 3L:10895029-10895078 7 72 1662 FBgn0036111 1989.25 99.36 152.7433333 0.036194546 0.724637681 0.471379002 -6 -6 -6 0.15 dme-miR-968-5p 6mer3-8 ACTACT 3L 10895162 10895167 - 3L_10895162_10895167_- 0.999840868 0.999999947 0.999920408 0.00011243 Aps FBtr0076250|FBtr0076252 10894774|10894774 10896130|10896130 3L - 10895138 10895181 3'utr Aps FlyBase G35980.1 TATGAACTAATTCAACTACTAAGATACGTGCACGTTGTACTTTT 5 10895164 0.987905902 4 4 36 0.833333333 0.698970004 0 0.2 0.333333333 5 1 0 5 3L:10895138-10895181 6 Aps FBtr0076252|FBtr0076250 10894774|10894774 10896130|10896130 ACTACT 6mer3-8 dme-miR-968-5p 3L - 10895128 10895183 3'utr Aps FlyBase G27213.1 ATTATGAACTAATTCAACTACTAAGATACGTGCACGTTGTACTTTTCAGATGCAAA 6 10895162 0.966027961 4 6 33 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 3L:10895128-10895183 6 4 1663 FBgn0036111 1989.25 99.36 152.7433333 0.002010808 0.040257649 0.026187722 -3 -5 -4 0.15 dme-miR-283-5p 8mer-m1 TGATATTT 3L 11059485 11059492 + 3L_11059485_11059492_+ 0.457983868 0.528369276 0.493176572 0.049769994 CG7888 FBtr0076200|FBtr0076199|FBtr0076201 11059249|11059249|11059249 11059659|11059659|11059659 3L + 11059455 11059522 3'utr CG7888 FlyBase G29503.1 TGTGTATTTGTATAGAATTTAACAGATTTGTGATATTTTTAGCGTCATGCCCAAGAATCTGTACAACA 88 11059481 0.821243861 12 82 894 0.956521739 1.56427143 0.043478261 0.227272727 0.408695652 88 3 2 110 3L:11059455-11059522 8 CG7888 FBtr0076201|FBtr0076200|FBtr0076199 11059249|11059249|11059249 11059659|11059659|11059659 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 11059458 11059526 3'utr CG7888 FlyBase G22326.2 GTATTTGTATAGAATTTAACAGATTTGTGATATTTTTAGCGTCATGCCCAAGAATCTGTACAACAAACG 43 11059481 0.811333434 11 39 396 0.867647059 1.071882007 0.088235294 0.441860465 0.647058824 43 5 4 59 3L:11059458-11059526 8 56 1664 FBgn0036116 3.67 0.246666667 0.366666667 15.25885559 227.027027 152.7272727 4 4 4 0.15 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 11059589 11059594 - 3L_11059589_11059594_- 0.711292228 0.987123768 0.849207998 0.195042395 CG6321 FBtr0076242 11059435 11059678 3L - 11059575 11059614 3'utr CG6321 FlyBase G35994.1 TTTAAATATGACTTAAAAGGATGTGACTGTGCACTAAACT 6 11059591 0.792210932 3 6 33 1 0.77815125 0 0 0 6 0 0 6 3L:11059575-11059614 6 CG6321 FBtr0076242 11059435 11059678 ATGTGA 6mer3-8 dme-miR-1003-3p 3L - 11059567 11059607 3'utr CG6321 FlyBase G27224.1 ATGACTTAAAAGGATGTGACTGTGCACTAAACTACTTATCA 5 11059592 0.952780089 3 5 27 1 0.84509804 0 0.2 0.428571429 5 0 0 7 3L:11059567-11059607 6 5 1665 FBgn0036117 179.99 13.81333333 21.14333333 0.027779321 0.361969112 0.23648116 -3 -2 -2.5 0.15 dme-bantam-3p 7mer-A1 GATCTCA 3L 11065892 11065898 + 3L_11065892_11065898_+ 0.743631401 0.6933449 0.71848815 0.035557925 CG45101 FBtr0344636 11065373 11069025 3L + 11065871 11065945 3'utr CG45101 FlyBase G29508.1 AGCCAACTACGGAGCATTGGAGATCTCAGTCGCCTCAAGTTCGACTACATTATGGTGGATAATCGGGGGCATTCG 29 11065887 0.762199209 7 28 169 0.96875 1.491361694 0.21875 0.103448276 0.1875 29 1 0 31 3L:11065871-11065945 7 CG45101 FBtr0344636 11065373 11069025 GATCTCA 7mer-A1 dme-bantam-3p 3L + 11065868 11065907 3'utr CG45101 FlyBase G22330.1 TGGAGCCAACTACGGAGCATTGGAGATCTCAGTCGCCTCA 13 11065887 0.766055596 4 13 60 1 1.255272505 0.111111111 0.307692308 0.5 13 0 0 18 3L:11065868-11065907 7 17 1666 FBgn0266540 111.74 3.59 5.523333333 0.152138894 4.735376045 3.077851539 5 5 5 0.15 dme-bantam-3p 6mer2-7 GATCTC 3L 11066225 11066230 + 3L_11066225_11066230_+ 0.987840714 0.999978382 0.993909548 0.00858265 CG45101 FBtr0344636 11065373 11069025 3L + 11066211 11066235 3'utr CG45101 FlyBase G29509.1 TCAGTAAGCGCATAGATCTCGAGGA 6 11066223 0.758607848 2 4 18 0.857142857 0.77815125 0.571428571 0.166666667 0.285714286 6 1 0 6 3L:11066211-11066235 6 CG45101 FBtr0344636 11065373 11069025 GATCTC 6mer2-7 dme-bantam-3p 3L + 11066211 11066238 3'utr CG45101 FlyBase G22332.1 TCAGTAAGCGCATAGATCTCGAGGAATA 7 11066223 0.896611907 2 5 24 0.8 1.079181246 0 0.857142857 0.933333333 7 3 0 12 3L:11066211-11066238 6 6.5 1667 FBgn0266540 111.74 3.59 5.523333333 0.058170754 1.810584958 1.176825588 2 2 2 0.15 dme-bantam-3p 8mer-A1 TGATCTCA 3L 11066820 11066827 + 3L_11066820_11066827_+ 0.630328986 0.630408258 0.630368622 5.61E-05 CG45101 FBtr0344636 11065373 11069025 3L + 11066791 11066844 3'utr CG45101 FlyBase G29510.1 AGCAAAAAAACGTCACCGCGCAAAAAAGCTGATCTCACCGATTCCGAAGAGGAT 26 11066820 0.919586977 3 24 79 0.933333333 1.447158031 0.4 0.115384615 0.233333333 26 2 0 28 3L:11066791-11066844 8 CG45101 FBtr0344636 11065373 11069025 TGATCTCA 8mer-A1 dme-bantam-3p 3L + 11066799 11066839 3'utr CG45101 FlyBase G22333.1 AACGTCACCGCGCAAAAAAGCTGATCTCACCGATTCCGAAG 16 11066820 0.920649309 3 16 39 1 1.322219295 0.238095238 0.25 0.428571429 16 0 0 21 3L:11066799-11066839 8 21 1668 FBgn0266540 111.74 3.59 5.523333333 0.187936281 5.849582173 3.802051901 0 0 0 0.15 dme-miR-307a-3p 6mer2-7 GTTGTG 3L 11079930 11079935 - 3L_11079930_11079935_- 0.999915835 0.774537349 0.887226592 0.159366666 JIL-1 FBtr0332707|FBtr0076237 11078750|11078750 11080622|11080622 3L - 11079913 11080039 5'utr JIL-1 FlyBase G36018.1 AAGATTTGCAATTAGTTTAGTGCAAAATTATGATTAAGACAAAATTGAGAAAGATATTCTTAGGGCGCCTATATTATATACACTACACACACAGTTTGCTTTTAGTTGTGCTTTATGTTAAGTTATA 59 11079927 0.990652986 16 57 585 0.95890411 1.367976785 0.109589041 0.186440678 0.342465753 59 1 2 70 3L:11079913-11080039 6 JIL-1 FBtr0076237|FBtr0332707 11078750|11078750 11080622|11080622 GTTGTG 6mer2-7 dme-miR-307a-3p 3L - 11079912 11079948 5'utr JIL-1 FlyBase G27235.1 CAGTTTGCTTTTAGTTGTGCTTTATGTTAAGTTATAT 18 11079927 0.75766104 3 18 212 1 1.462397998 0.137931034 0.444444444 0.655172414 18 0 0 29 3L:11079912-11079948 6 30.5 1669 FBgn0020412 872.0633333 16.06666667 24.67666667 0.034974524 1.898340249 1.235985411 -8 -8 -8 0.15 dme-miR-14-3p 6mer3-8 AAGACT 3L 11112028 11112033 + 3L_11112028_11112033_+ 0.976880127 0.930813047 0.953846587 0.032574359 CG7638 FBtr0076210 11111863 11112117 3L + 11112014 11112063 3'utr CG7638 FlyBase G29528.1 TAAAGTGTGTTTTAAAGACTTTTAACCAGGCTGCCCGGAGAGTAACCAAA 35 11112035 0.819411551 5 35 252 1 1.612783857 0.243902439 0.171428571 0.292682927 35 0 0 41 3L:11112014-11112063 6 CG7638 FBtr0076210 11111863 11112117 AAGACT 6mer3-8 dme-miR-14-3p 3L + 11111992 11112062 3'utr CG7638 FlyBase G22341.1 ATACTACCTAACTCATTGTTTATAAAGTGTGTTTTAAAGACTTTTAACCAGGCTGCCCGGAGAGTAACCAA 30 11112035 0.750377306 5 28 232 0.926829268 1.579783597 0.219512195 0.366666667 0.536585366 30 3 0 38 3L:11111992-11112062 6 27 1670 FBgn0036133 348.3333333 22.38666667 34.17666667 0.077511962 1.206075045 0.790012679 -7 -7 -7 0.15 dme-miR-1006-3p 6mer2-7 GAATTT 3L 11114974 11114979 - 3L_11114974_11114979_- 0.995530197 0.999998838 0.997764518 0.003159777 fd68A FBtr0300785|FBtr0300786|FBtr0300784|FBtr0301967|FBtr0300783|FBtr0332654|FBtr0332653|FBtr0332652 11114268|11114167|11114167|11114167|11114268|11114268|11114167|11114167 11115084|11115084|11115084|11115084|11115084|11115084|11115084|11115042 3L - 11114967 11115009 3'utr fd68A FlyBase G36059.1 AAACAAAAAAGTATCTCCATCTTGTATATTGAATTTGCCAATC 8 11114997 0.977652188 5 6 77 0.777777778 0.84509804 0 0.125 0.222222222 8 2 0 7 3L:11114967-11115009 6 fd68A FBtr0332652|FBtr0332653|FBtr0332654|FBtr0300783|FBtr0301967|FBtr0300784|FBtr0300786|FBtr0300785 11114167|11114167|11114268|11114268|11114167|11114167|11114167|11114268 11115042|11115084|11115084|11115084|11115084|11115084|11115084|11115084 GAATTT 6mer2-7 dme-miR-1006-3p 3L - 11114970 11115006 3'utr fd68A FlyBase G27261.1 CAAAAAAGTATCTCCATCTTGTATATTGAATTTGCCA 8 11114987 0.883761298 5 6 70 0.875 0.84509804 0 0.5 0.75 8 1 1 14 3L:11114970-11115006 6 7 1671 FBgn0036134 852.62 30.46666667 46.7 0.008209988 0.2297593 0.149892934 18 8 13 0.15 dme-miR-932-5p 7mer-A1 GAATTGA 3L 11178282 11178288 - 3L_11178282_11178288_- 0.823349449 0.823348289 0.823348869 7.78E-07 GlcAT-P FBtr0076190|FBtr0306254|FBtr0076189|FBtr0100422|FBtr0306255 11176952|11176952|11176952|11176952|11176952 11178417|11178417|11178417|11178417|11178417 3L - 11178246 11178320 3'utr GlcAT-P FlyBase G36087.2 AGGTACAATCCGGCGCACGGAGATACCAATCAGAATTGATCAGATCATTAGTCGGTGTACATTATTATCATAATC 78 11178285 0.736333693 10 72 412 0.948979592 1.667452953 0.214285714 0.207792208 0.37755102 77 4 1 93 3L:11178246-11178320 7 GlcAT-P FBtr0076190|FBtr0306255|FBtr0100422|FBtr0076189|FBtr0306254 11176952|11176952|11176952|11176952|11176952 11178417|11178417|11178417|11178417|11178417 GAATTGA 7mer-A1 dme-miR-932-5p 3L - 11178167 11178318 3'utr GlcAT-P FlyBase G27282.2 GTACAATCCGGCGCACGGAGATACCAATCAGAATTGATCAGATCATTAGTCGGTGTACATTATTATCATAATCATATGATTAGTTAGGCTCTAAGCGCACACATACCTATGATAATTCTTTGCACCGTAGTCTTTGTTTGTTCGCACACCTA 77 11178285 0.746255967 19 73 461 0.930434783 2.029383778 0.156521739 0.363636364 0.573913043 77 8 0 107 3L:11178167-11178318 7 61.5 1672 FBgn0036144 1851.176667 64.88333333 98.86 0.033222113 0.947855125 0.622091847 -3 -3 -3 0.15 dme-miR-92b-3p 6mer3-8 GTGCAA 3L 11227856 11227861 + 3L_11227856_11227861_+ 0.925660442 0.919408702 0.922534572 0.004420619 CG42671 FBtr0304934|FBtr0302699|FBtr0302696|FBtr0302697|FBtr0330283|FBtr0339906|FBtr0304933 11227708|11227708|11227708|11227708|11227741|11227708|11227708 11229635|11228546|11228546|11228546|11228546|11230512|11229635 3L + 11227832 11227881 3'utr CG42671 FlyBase G29560.1 AAACATGCCACACGATCTAACATGGTGCAAGCAGCAGCGGCAGCAGCAGA 33 11227854 0.908619258 2 31 97 0.976190476 1.311753861 0.523809524 0.151515152 0.333333333 33 0 1 41 3L:11227832-11227881 6 CG42671 FBtr0302696|FBtr0302699|FBtr0304934|FBtr0304933|FBtr0339906|FBtr0330283|FBtr0302697 11227708|11227708|11227708|11227708|11227708|11227741|11227708 11228546|11228546|11229635|11229635|11230512|11228546|11228546 GTGCAA 6mer3-8 dme-miR-92b-3p 3L + 11227836 11227876 3'utr CG42671 FlyBase G22362.1 ATGCCACACGATCTAACATGGTGCAAGCAGCAGCGGCAGCA 20 11227854 0.907060548 2 20 63 1 1.579783597 0.473684211 0.55 0.763157895 20 0 0 38 3L:11227836-11227876 6 26 1673 FBgn0261553 751.82 16.21 24.91666667 0.034582746 1.60394818 1.043478261 2 2 2 0.15 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3L 11229809 11229814 + 3L_11229809_11229814_+ 0.889524308 0.901895973 0.89571014 0.008748113 CG42671 FBtr0345849|FBtr0339906|FBtr0339907 11229352|11227708|11229352 11230745|11230512|11230512 3L + 11229789 11229834 3'utr CG42671 FlyBase G29563.1 TATTCTAGCATTGTCGACTTTGGTGCAAATAACTTAAATATTATAC 33 11229809 0.751763781 4 32 278 0.975 1.591064607 0.1 0.181818182 0.325 33 1 0 39 3L:11229789-11229834 6 CG42671 FBtr0345849|FBtr0339907|FBtr0339906 11229352|11229352|11227708 11230745|11230512|11230512 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3L + 11229787 11229828 3'utr CG42671 FlyBase G22366.1 GATATTCTAGCATTGTCGACTTTGGTGCAAATAACTTAAATA 29 11229808 0.761275036 3 27 230 0.975 1.591064607 0.175 0.310344828 0.5 29 1 0 39 3L:11229787-11229828 6 30.5 1674 FBgn0261553 751.82 16.21 24.91666667 0.040568221 1.881554596 1.224080268 0 1 0.5 0.15 dme-bantam-3p 6mer3-8 TGATCT 3L 11254488 11254493 + 3L_11254488_11254493_+ 0.999998311 0.999999917 0.999999114 1.13E-06 scyl FBtr0076168|FBtr0339908 11254474|11254474 11255243|11256172 3L + 11254435 11254665 stop_codon scyl FlyBase G29573.2 CCCATAGACCCAGTGCGGCCATCGCCACGCCCACCAACTAATGGTGATCAGCTTGATCTGTCAGATATGCATATGTTCGTATATGTGTCTGCGCGAAACAAAAAAAACACCACCCCTGTGATGATCGAGAGCAGTAGTTTGTTGCAGTTTGAAGTGCAACAACGAAGCAAGTATTCGAAGCCACCCCACCTACACCACACACACACACACACAAACACCTTTAATACACAC 974 11254488 0.826653055 34 923 7015 0.937552743 1.966532813 0.401687764 0.169404517 0.317299578 974 63 11 1111 3L:11254435-11254665 6 scyl FBtr0076168|FBtr0339908 11254474|11254474 11255243|11256172 TGATCT 6mer3-8 dme-bantam-3p 3L + 11254433 11254530 stop_codon scyl FlyBase G22379.1 CGCCCATAGACCCAGTGCGGCCATCGCCACGCCCACCAACTAATGGTGATCAGCTTGATCTGTCAGATATGCATATGTTCGTATATGTGTCTGCGCGA 530 11254488 0.919211239 16 507 4036 0.955762515 1.914343157 0.464493597 0.435849057 0.651920838 530 29 9 821 3L:11254433-11254530 6 655.5 1675 FBgn0041094 3053.616667 135.47 208.0166667 0.214663486 4.838709677 3.151189809 0 0 0 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 11255018 11255024 + 3L_11255018_11255024_+ 0.754018116 0.754108188 0.754063152 6.37E-05 scyl FBtr0076168|FBtr0076168|FBtr0076168|FBtr0339908|FBtr0339908|FBtr0339908 11254474|11254474|11254474|11254474|11254474|11254474 11255243|11255243|11255243|11256172|11256172|11256172 3L + 11254967 11255101 3'utr scyl FlyBase G29576.1 ATATTTCTGGGGCATTCGCTTTGGGGCTCGCCGGTCGACAACTCATGAATATGTGATACTGTTTAAGATGCTAAGAGTTTTTTGCCGGATGCACCAAAGTCCGGCAAAAGACGTTGATAAAATTACACATAACAC 379 11255013 0.814937502 27 324 2884 0.860759494 2.133538908 0.297468354 0.213720317 0.371308017 379 64 2 408 3L:11254967-11255101 7 scyl FBtr0076168|FBtr0076168|FBtr0076168|FBtr0339908|FBtr0339908|FBtr0339908 11254474|11254474|11254474|11254474|11254474|11254474 11255243|11255243|11255243|11256172|11256172|11256172 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 11254915 11255103 3'utr scyl FlyBase G22383.1 AAACCAACATGAAATTCAAAGACGACAGCCCCACGAATCAATCCCCAGAATCATATTTCTGGGGCATTCGCTTTGGGGCTCGCCGGTCGACAACTCATGAATATGTGATACTGTTTAAGATGCTAAGAGTTTTTTGCCGGATGCACCAAAGTCCGGCAAAAGACGTTGATAAAATTACACATAACACAC 313 11255013 0.999641769 30 260 2304 0.834728033 1.822821645 0.336820084 0.370607029 0.587866109 313 74 5 399 3L:11254915-11255103 7 240.5 1676 FBgn0041094 3053.616667 135.47 208.0166667 0.078759067 1.775300805 1.156157359 5 5 5 0.15 dme-bantam-3p 6mer3-8 TGATCT 3L 11255249 11255254 + 3L_11255249_11255254_+ 0.968273786 0.97169793 0.969985858 0.002421204 scyl FBtr0339908 11254474 11256172 3L + 11255198 11255347 3'utr scyl FlyBase G29578.1 AATTGTATGCTATATAGTAATAAACAAAGAAACCAACAAAACAAACAAACTTGATCTTGGTAAATTTAAAATTTAACTTTAAAACTGAGAGAGATGAGGGCCTCGAACTGTGAAAGAGGTAGATGATCACACGCTCCAATTTTAGTTAGA 776 11255249 0.925336931 25 730 4868 0.950052029 1.638251483 0.043704475 0.176546392 0.335067638 776 28 20 913 3L:11255198-11255347 6 scyl FBtr0339908 11254474 11256172 TGATCT 6mer3-8 dme-bantam-3p 3L + 11255235 11255366 3'utr scyl FlyBase G22384.1 AAAACAAACAAACTTGATCTTGGTAAATTTAAAATTTAACTTTAAAACTGAGAGAGATGAGGGCCTCGAACTGTGAAAGAGGTAGATGATCACACGCTCCAATTTTAGTTAGACGCAGCTTGCTGCAATAAA 603 11255249 0.872144453 28 570 3535 0.947194719 1.573275315 0.053905391 0.354892206 0.572057206 603 26 22 861 3L:11255235-11255366 6 565.5 1677 FBgn0041094 3053.616667 135.47 208.0166667 0.185190239 4.174355946 2.718532169 0 0 0 0.15 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 11255584 11255589 + 3L_11255584_11255589_+ 0.618822856 0.759109538 0.688966197 0.099197606 scyl FBtr0339908 11254474 11256172 3L + 11255549 11255676 3'utr scyl FlyBase G29580.1 AAGCATAAAATTTAAGGCAATGAATATCTCAGTAAATGTGAAAGCGTAAAAAATTTGTAAAATTTTTTTGTCTGTGTAAAAACTCCCAATGCGATATGAAAACAAAAACTTAAATGTAGCTGCAAAAA 193 11255581 0.925267651 13 186 1116 0.953974895 1.512836807 0.058577406 0.196891192 0.351464435 193 5 6 228 3L:11255549-11255676 6 scyl FBtr0339908 11254474 11256172 ATGTGA 6mer3-8 dme-miR-1003-3p 3L + 11255561 11255603 3'utr scyl FlyBase G22387.1 TAAGGCAATGAATATCTCAGTAAATGTGAAAGCGTAAAAAATT 123 11255581 0.776072078 7 114 714 0.940540541 1.763427994 0.021621622 0.333333333 0.556756757 123 9 2 174 3L:11255561-11255603 6 133.5 1678 FBgn0041094 3053.616667 135.47 208.0166667 0.043718651 0.985458035 0.641775499 3 3 3 0.15 dme-miR-1003-3p 7mer-A1 TGTGAGA 3L 11256039 11256045 + 3L_11256039_11256045_+ 0.822740788 0.821692119 0.822216454 0.000741543 scyl FBtr0339908 11254474 11256172 3L + 11256013 11256061 3'utr scyl FlyBase G29583.1 TTTATTGCGTAAAACAACAAAATAATTGTGAGAAATTTGTAACCAAAAC 25 11256038 0.698190375 5 25 143 1 1.505149978 0.25 0.16 0.34375 25 0 0 32 3L:11256013-11256061 7 scyl FBtr0339908 11254474 11256172 TGTGAGA 7mer-A1 dme-miR-1003-3p 3L + 11256020 11256062 3'utr scyl FlyBase G22389.1 CGTAAAACAACAAAATAATTGTGAGAAATTTGTAACCAAAACA 23 11256038 0.962665033 2 23 122 1 1.51851394 0.181818182 0.391304348 0.575757576 23 0 0 33 3L:11256020-11256062 7 24 1679 FBgn0041094 3053.616667 135.47 208.0166667 0.007859533 0.177160995 0.115375371 1 1 1 0.15 dme-miR-932-5p 7mer-A1 GAATTGA 3L 11288177 11288183 - 3L_11288177_11288183_- 0.621347189 0.72506816 0.673207675 0.073341822 CG6175 FBtr0076183|FBtr0333389|FBtr0333388 11287934|11287934|11287934 11288850|11288850|11288850 3L - 11288157 11288193 3'utr CG6175 FlyBase G36135.1 AAACGAACGCGAATTGATTGCAAAATGTCTACATGTA 11 11288179 0.959792709 2 11 62 1 1.079181246 0 0.090909091 0.166666667 11 0 0 12 3L:11288157-11288193 7 CG6175 FBtr0333389|FBtr0333388|FBtr0076183 11287934|11287934|11287934 11288850|11288850|11288850 GAATTGA 7mer-A1 dme-miR-932-5p 3L - 11288157 11288190 3'utr CG6175 FlyBase G27317.1 CGAACGCGAATTGATTGCAAAATGTCTACATGTA 5 11288179 0.864773898 3 5 27 1 0.903089987 0.625 0.4 0.625 5 0 0 8 3L:11288157-11288190 7 8 1680 FBgn0036152 153.01 4.68 7.153333333 0.052284164 1.709401709 1.118359739 -4 -4 -4 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 3L 1141097 1141103 - 3L_1141097_1141103_- 0.619965736 0.620083915 0.620024825 8.36E-05 bab2 FBtr0333271|FBtr0072639 1140427|1140427 1141967|1141967 3L - 1141083 1141124 3'utr bab2 FlyBase G33220.1 AAAGTTACGATTAGAGACTTGTGCATTTCTTAAATGTAGCTT 9 1141103 0.975095415 3 9 61 1 1 0 0.111111111 0.2 9 0 0 10 3L:1141083-1141124 7 bab2 FBtr0333271|FBtr0072639 1140427|1140427 1141967|1141967 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 1141067 1141131 3'utr bab2 FlyBase G25135.1 AAACATTAAAGTTACGATTAGAGACTTGTGCATTTCTTAAATGTAGCTTAACCCTAGAATAGCCC 11 1141104 0.982455407 6 11 84 1 1.204119983 0.0625 0.363636364 0.5625 11 0 0 16 3L:1141067-1141131 7 9 1681 FBgn0025525 40 0.97 1.503333333 0.225 9.278350515 5.986696231 0 1 0.5 0.15 dme-bantam-3p 6mer3-8 TGATCT 3L 11495244 11495249 + 3L_11495244_11495249_+ 0.983441309 0.989910127 0.986675718 0.004574132 chrb FBtr0076093|FBtr0344910 11495094|11495094 11499055|11499055 3L + 11495178 11495267 3'utr chrb FlyBase G29589.1 AACAGCAGCAATCGCAATACGAACATCTATTGGTTGTGCCTCCTTCGTCGCAATAGCCAAGATTCATGATCTTCATTATGGAATATAGAG 31 11495244 0.986331879 7 28 244 0.974358974 1.579783597 0.333333333 0.258064516 0.41025641 31 1 0 38 3L:11495178-11495267 6 chrb FBtr0076093|FBtr0344910 11495094|11495094 11499055|11499055 TGATCT 6mer3-8 dme-bantam-3p 3L + 11495223 11495294 3'utr chrb FlyBase G22393.1 CGTCGCAATAGCCAAGATTCATGATCTTCATTATGGAATATAGAGAGATGATGTTTAACCCTAGAGGCAAAC 14 11495244 0.989054931 3 13 108 0.952380952 1.301029996 0.142857143 0.285714286 0.523809524 14 1 0 20 3L:11495223-11495294 6 18.5 1682 FBgn0036165 903.39 19.18 29.98 0.02047842 0.964546403 0.617078052 0 0 0 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 11496018 11496024 + 3L_11496018_11496024_+ 0.730142931 0.692545252 0.711344092 0.026585518 chrb FBtr0076093|FBtr0076093|FBtr0076093|FBtr0344910|FBtr0344910|FBtr0344910 11495094|11495094|11495094|11495094|11495094|11495094 11499055|11499055|11499055|11499055|11499055|11499055 3L + 11495994 11496040 3'utr chrb FlyBase G29591.1 TAACAAATATAAAAACAAAGTTGATGTGATATTATATAATAATTATG 53 11496015 0.851912783 6 51 498 0.965517241 1.748188027 0.034482759 0.075471698 0.155172414 53 2 0 56 3L:11495994-11496040 7 chrb FBtr0076093|FBtr0076093|FBtr0076093|FBtr0344910|FBtr0344910|FBtr0344910 11495094|11495094|11495094|11495094|11495094|11495094 11499055|11499055|11499055|11499055|11499055|11499055 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 11495959 11496040 3'utr chrb FlyBase G22395.1 TCGATCAATCGAGGCAGAAAGAGGAAAGTTAATAATAACAAATATAAAAACAAAGTTGATGTGATATTATATAATAATTATG 43 11496015 0.989287264 8 39 372 0.933333333 1.748188027 0.05 0.372093023 0.55 43 4 0 56 3L:11495959-11496040 7 46 1683 FBgn0036165 903.39 19.18 29.98 0.050919315 2.398331595 1.534356237 3 3 3 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 3L 11496820 11496825 + 3L_11496820_11496825_+ 0.99755925 0.999986902 0.998773076 0.001716643 chrb FBtr0076093|FBtr0344910 11495094|11495094 11499055|11499055 3L + 11496805 11496841 3'utr chrb FlyBase G29592.1 AAATATAAAGTCATCTGTGTTAATAAATTTTAAAATA 9 11496818 0.827834511 2 7 76 0.923076923 1.079181246 0 0.222222222 0.461538462 9 1 0 12 3L:11496805-11496841 6 chrb FBtr0076093|FBtr0344910 11495094|11495094 11499055|11499055 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 11496806 11496830 3'utr chrb FlyBase G22396.1 AATATAAAGTCATCTGTGTTAATAA 5 11496819 0.68393326 2 5 35 1 0.84509804 0 0.4 0.571428571 5 0 0 7 3L:11496806-11496830 6 6.5 1684 FBgn0036165 903.39 19.18 29.98 0.007195121 0.338894682 0.216811207 2 1 1.5 0.15 dme-miR-184-5p 6mer3-8 TGATAA 3L 11497179 11497184 + 3L_11497179_11497184_+ 0.94154412 0.849386894 0.895465507 0.065164981 chrb FBtr0076093|FBtr0344910 11495094|11495094 11499055|11499055 3L + 11497131 11497235 3'utr chrb FlyBase G29593.1 AATCAATCCCACAAAGATCTCGACTAATAAGATGAAGAACTCATTATATGATAAATGATAGAGCGGAAGGAAAATTACACAAGAGAAGATACAATTTAGATATTT 14 11497150 0.987619007 9 9 71 0.8 0.602059991 0.066666667 0.071428571 0.133333333 14 1 2 12 3L:11497131-11497235 6 chrb FBtr0076093|FBtr0344910 11495094|11495094 11499055|11499055 TGATAA 6mer3-8 dme-miR-184-5p 3L + 11497135 11497196 3'utr chrb FlyBase G22397.1 AATCCCACAAAGATCTCGACTAATAAGATGAAGAACTCATTATATGATAAATGATAGAGCGG 5 11497174 0.98591134 3 4 28 0.857142857 0.77815125 0.142857143 0.4 0.571428571 5 1 0 6 3L:11497135-11497196 6 3.5 1685 FBgn0036165 903.39 19.18 29.98 0.003874296 0.182481752 0.116744496 29 5 17 0.15 dme-miR-92b-3p 6mer3-8 GTGCAA 3L 11563438 11563443 + 3L_11563438_11563443_+ 0.858274745 0.853570027 0.855922386 0.003326725 CG7394 FBtr0333215|FBtr0305648 11563415|11563415 11564312|11564312 3L + 11563367 11563497 stop_codon CG7394 FlyBase G29597.1 TGGCGGCCAAGATCAACGAGGCCAAAGACTTTCTGGACAAAGCGAAGTAGTCATCCTCTCCCCGCCGTTCAGTGCAAATAAAGTAGTAGTTCGTGATTAGCATGTAAGCTGAAAGTCTTATGCGTTTTATT 88 11563435 0.874303925 14 85 526 0.96969697 1.681241237 0.232323232 0.113636364 0.212121212 88 2 1 96 3L:11563367-11563497 6 CG7394 FBtr0305648|FBtr0333215|FBtr0290024 11563415|11563415|11563415 11564312|11564312|11563828 GTGCAA 6mer3-8 dme-miR-92b-3p 3L + 11563381 11563478 stop_codon CG7394 FlyBase G22400.1 AACGAGGCCAAAGACTTTCTGGACAAAGCGAAGTAGTCATCCTCTCCCCGCCGTTCAGTGCAAATAAAGTAGTAGTTCGTGATTAGCATGTAAGCTGA 48 11563435 0.972904833 12 42 261 0.876923077 1.755874856 0.230769231 0.3125 0.492307692 48 8 0 57 3L:11563381-11563478 6 31 1686 FBgn0036173 327.5733333 73.10333333 113.5633333 0.094635298 0.424057271 0.272975432 3 3 3 0.15 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3L 11605486 11605491 - 3L_11605486_11605491_- 0.988999096 0.992369717 0.990684406 0.002383374 CG6091 FBtr0273305|FBtr0273306 11605434|11605434 11606103|11606103 3L - 11605468 11605511 3'utr CG6091 FlyBase G36169.1 ATTTAATTGACTACAATAAATGGTGCATATTAATCGTAATTTAT 107 11605491 0.863624801 9 105 918 0.974789916 2.064457989 0.092436975 0.093457944 0.18487395 107 3 0 116 3L:11605468-11605511 6 CG6091 FBtr0273306|FBtr0273305 11605434|11605434 11606103|11606103 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3L - 11605468 11605511 3'utr CG6091 FlyBase G27342.1 ATTTAATTGACTACAATAAATGGTGCATATTAATCGTAATTTAT 67 11605491 0.866199681 6 67 570 1 1.944482672 0.090909091 0.23880597 0.420454545 67 0 0 88 3L:11605468-11605511 6 86 1687 FBgn0036180 776.52 29.66333333 45.66333333 0.110750528 2.899202158 1.88334915 0 0 0 0.15 dme-miR-980-5p 6mer3-8 GAAAAA 3L 11629763 11629768 + 3L_11629763_11629768_+ 0.966469842 0.9943277 0.980398771 0.01969851 CG18815 FBtr0076103|FBtr0076105|FBtr0076104 11629606|11629606|11629606 11629992|11629992|11629992 3L + 11629745 11629776 3'utr CG18815 FlyBase G29615.1 ATTATGGAAATTATCACTGAAAAATCAATTCG 6 11629756 0.610569028 5 6 33 1 0.77815125 0.166666667 0 0 6 0 0 6 3L:11629745-11629776 6 CG18815 FBtr0076104|FBtr0076105|FBtr0076103 11629606|11629606|11629606 11629992|11629992|11629992 GAAAAA 6mer3-8 dme-miR-980-5p 3L + 11629738 11629783 3'utr CG18815 FlyBase G22410.1 TAGCCCAATTATGGAAATTATCACTGAAAAATCAATTCGAAAAGCA 5 11629748 0.793970976 3 5 34 1 0.903089987 0 0.4 0.625 5 0 0 8 3L:11629738-11629783 6 5 1688 FBgn0042138 741.6666667 76.60333333 116.84 0.006741573 0.065271311 0.042793564 7 15 11 0.15 dme-miR-11-3p 8mer-m1 CTGTGATG 3L 11642549 11642556 + 3L_11642549_11642556_+ 0.451065361 0.453395366 0.452230364 0.001647559 CG32091 FBtr0076106 11642492 11642902 3L + 11642497 11642597 3'utr CG32091 FlyBase G29620.1 TGAAACCAATATTCCAGATGAATCTTATCCCTAGCTTTAGGCAATGTCAATGCTGTGATGTTCGATTTTAAACAGACAGATAGATACTTCCTGTACATACT 56 11642547 0.985532041 11 55 457 0.986111111 1.851258349 0.111111111 0.196428571 0.375 56 1 0 71 3L:11642497-11642597 8 CG32091 FBtr0076106 11642492 11642902 CTGTGATG 8mer-m1 dme-miR-11-3p 3L + 11642523 11642574 3'utr CG32091 FlyBase G22414.1 ATCCCTAGCTTTAGGCAATGTCAATGCTGTGATGTTCGATTTTAAACAGACA 37 11642547 0.828858196 4 34 295 0.929824561 1.72427587 0.140350877 0.416666667 0.631578947 36 4 0 53 3L:11642523-11642574 8 41.5 1689 FBgn0052091 18 0.773333333 1.216666667 2.305555556 53.6637931 34.10958904 2 2 2 0.15 dme-miR-1008-3p 7mer-A1 GCTGTGA 3L 11650746 11650752 - 3L_11650746_11650752_- 0.315268479 0.331432992 0.323350735 0.011430028 CG32085 FBtr0076133 11650515 11650969 3L - 11650735 11650835 3'utr CG32085 FlyBase G36203.1 AAGTTCCTCGCGTGCTATGTGACTTTAACTTTCCGTCAACACTGTACTCTATCCCTTATAGTTTTAGACTTATTTTGATTTCTGCTGTGATTTGATACGGA 50 11650744 0.743598742 21 48 494 0.970588235 1.51851394 0.323529412 0.26 0.455882353 50 1 1 66 3L:11650735-11650835 7 CG32085 FBtr0076133 11650515 11650969 GCTGTGA 7mer-A1 dme-miR-1008-3p 3L - 11650731 11650772 3'utr CG32085 FlyBase G27361.1 TTAGACTTATTTTGATTTCTGCTGTGATTTGATACGGAACTT 33 11650744 0.667713719 8 31 317 1 1.716003344 0.365384615 0.393939394 0.615384615 33 0 0 52 3L:11650731-11650772 7 31 1690 FBgn0052085 2.333333333 0.09 0.133333333 13.28571429 344.4444444 232.5 -8 -8 -8 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 3L 11683771 11683777 + 3L_11683771_11683777_+ 0.782763127 0.782847537 0.782805332 5.97E-05 TfIIEalpha FBtr0076108 11683668 11683805 3L + 11683710 11683791 3'utr TfIIEalpha FlyBase G29637.1 GTTTCCCATCTCACGCATAGAGTCATTGTAATTTAAGTTACCCACTAGTTCGAGCGAATGTGTACAAATGAAATGCGTATAA 25 11683768 0.841836871 8 24 152 1 1.491361694 0.129032258 0.24 0.387096774 25 0 0 31 3L:11683710-11683791 7 TfIIEalpha FBtr0076108 11683668 11683805 GTACAAA 7mer-A1 dme-miR-305-5p 3L + 11683707 11683792 3'utr TfIIEalpha FlyBase G22426.1 CGAGTTTCCCATCTCACGCATAGAGTCATTGTAATTTAAGTTACCCACTAGTTCGAGCGAATGTGTACAAATGAAATGCGTATAAA 23 11683769 0.962600594 8 21 113 0.933333333 1.447158031 0.1 0.260869565 0.433333333 23 2 0 28 3L:11683707-11683792 7 17.5 1691 FBgn0015828 547.3633333 41.38 63.43333333 0.031971451 0.422909618 0.275880189 3 2 2.5 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 11688588 11688595 + 3L_11688588_11688595_+ 0.500073262 0.500073 0.500073131 2.12E-07 Sug FBtr0273362 11688459 11688825 3L + 11688565 11688617 3'utr Sug FlyBase G29641.1 ATGCAGTGGATACGCTGGCCATTGTACTTAAACCACCATATATTTTGTAAGAT 116 11688587 0.77378824 3 110 727 0.969924812 1.809559715 0.015037594 0.129310345 0.240601504 116 3 1 129 3L:11688565-11688617 8 Sug FBtr0273362 11688459 11688825 GTACTTAA 8mer-A1 dme-miR-252-5p 3L + 11688565 11688606 3'utr Sug FlyBase G22429.1 ATGCAGTGGATACGCTGGCCATTGTACTTAAACCACCATATA 71 11688587 0.759257945 2 71 424 1 2.017033339 0 0.352112676 0.557692308 71 0 0 104 3L:11688565-11688606 8 92.5 1692 FBgn0036191 390.82 14.43333333 22.11666667 0.236681848 6.408775982 4.18236624 1 1 1 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 3L 11689339 11689344 + 3L_11689339_11689344_+ 0.965914153 0.979502115 0.972708134 0.009608096 Sug FBtr0344966|FBtr0300100 11689180|11689180 11690155|11690155 3L + 11689309 11689393 3'utr Sug FlyBase G29642.1 ACTCCCGAGCTGCATGTTGAATCGATGTACTACCTGTATTGTAATCTCGCTTTAATTAAGTAGTAACTTATCTCAGTAGCCCCAC 106 11689334 0.824744584 11 103 786 0.977941176 2.123851641 0.176470588 0.235849057 0.404411765 106 3 0 133 3L:11689309-11689393 6 Sug FBtr0344966|FBtr0300100 11689180|11689180 11690155|11690155 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 3L + 11689309 11689392 3'utr Sug FlyBase G22430.1 ACTCCCGAGCTGCATGTTGAATCGATGTACTACCTGTATTGTAATCTCGCTTTAATTAAGTAGTAACTTATCTCAGTAGCCCCA 75 11689334 0.982069065 7 75 554 1 2.086359831 0.180327869 0.426666667 0.647540984 75 0 0 122 3L:11689309-11689392 6 86 1693 FBgn0036191 390.82 14.43333333 22.11666667 0.220050151 5.958429561 3.888470234 5 5 5 0.15 dme-miR-308-3p 8mer-m1 CTGTGATT 3L 11689588 11689595 + 3L_11689588_11689595_+ 0.277061515 0.222117687 0.249589601 0.038851134 Sug FBtr0344966|FBtr0300100 11689180|11689180 11690155|11690155 3L + 11689562 11689617 3'utr Sug FlyBase G29644.1 AGTTTAAATAAGCCGCTGCCTTGGCGCTGTGATTGTTCAACTATTGTTTCTCCACA 92 11689595 0.82371723 10 92 722 1 2.033423755 0.157407407 0.141304348 0.268518519 92 0 0 108 3L:11689562-11689617 8 Sug FBtr0344966|FBtr0300100 11689180|11689180 11690155|11690155 CTGTGATT 8mer-m1 dme-miR-308-3p 3L + 11689565 11689607 3'utr Sug FlyBase G22432.1 TTAAATAAGCCGCTGCCTTGGCGCTGTGATTGTTCAACTATTG 61 11689595 0.691771813 7 59 470 0.961904762 1.703291378 0.152380952 0.475409836 0.695238095 61 3 1 101 3L:11689565-11689607 8 75.5 1694 FBgn0036191 390.82 14.43333333 22.11666667 0.193183563 5.230946882 3.413715147 -7 -7 -7 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 11689729 11689734 + 3L_11689729_11689734_+ 0.994196675 0.999977625 0.99708715 0.004087714 Sug FBtr0344966|FBtr0344966|FBtr0344966|FBtr0300100|FBtr0300100|FBtr0300100 11689180|11689180|11689180|11689180|11689180|11689180 11690155|11690155|11690155|11690155|11690155|11690155 3L + 11689720 11689755 3'utr Sug FlyBase G29646.1 TTTTTTTTTCTGTGAAATCTCTTAAGTGCTTACTTA 6 11689728 0.60911767 4 6 69 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3L:11689720-11689755 6 Sug FBtr0344966|FBtr0344966|FBtr0344966|FBtr0300100|FBtr0300100|FBtr0300100 11689180|11689180|11689180|11689180|11689180|11689180 11690155|11690155|11690155|11690155|11690155|11690155 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 11689722 11689749 3'utr Sug FlyBase G22433.1 TTTTTTTCTGTGAAATCTCTTAAGTGCT 5 11689742 0.645295107 3 5 43 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 3L:11689722-11689749 6 5 1695 FBgn0036191 390.82 14.43333333 22.11666667 0.012793613 0.346420323 0.226073851 1 -13 -6 0.15 dme-miR-11-3p 7mer-m1 TGTGATG 3L 11699900 11699906 - 3L_11699900_11699906_- 0.535593562 0.508251347 0.521922454 0.019333926 CG11658 FBtr0076126 11699494 11700696 3L - 11699890 11699924 3'utr CG11658 FlyBase G36216.1 GTAGCGTGGGGAAAATCATGTGATGTTGCAGGAAG 7 11699899 0.708582735 3 7 41 1 0.903089987 0.625 0.142857143 0.25 7 0 0 8 3L:11699890-11699924 7 CG11658 FBtr0076126 11699494 11700696 TGTGATG 7mer-m1 dme-miR-11-3p 3L - 11699881 11699924 3'utr CG11658 FlyBase G27373.1 GTAGCGTGGGGAAAATCATGTGATGTTGCAGGAAGCAAAGCTAG 6 11699899 0.957941575 3 6 31 1 0.77815125 1 0 0 6 0 0 6 3L:11699881-11699924 7 6.5 1696 FBgn0036196 52.87 2.63 4.06 0.122943068 2.47148289 1.600985222 -7 -7 -7 0.15 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 3L 11700022 11700029 - 3L_11700022_11700029_- 0.625340388 0.62534905 0.625344719 6.08E-06 CG11658 FBtr0076126 11699494 11700696 3L - 11700003 11700050 3'utr CG11658 FlyBase G36217.1 TTAACGTTTATCAGCTGCTTTTGGTGCTAAATCGTATTATAAGTTACA 128 11700030 0.753466129 5 124 1365 0.972413793 2.149219113 0.137931034 0.125 0.227586207 128 4 0 141 3L:11700003-11700050 8 CG11658 FBtr0076126 11699494 11700696 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 3L - 11700004 11700050 3'utr CG11658 FlyBase G27374.1 TTAACGTTTATCAGCTGCTTTTGGTGCTAAATCGTATTATAAGTTAC 74 11700030 0.735024211 8 71 748 0.972972973 2.033423755 0.126126126 0.364864865 0.576576577 74 3 0 108 3L:11700004-11700050 8 100.5 1697 FBgn0036196 52.87 2.63 4.06 1.900888973 38.21292776 24.75369458 1 1 1 0.15 dme-miR-8-3p 6mer2-7 AGTATT 3L 11700648 11700653 - 3L_11700648_11700653_- 0.992443373 0.981089201 0.986766287 0.008028632 CG11658 FBtr0076127|FBtr0076126|FBtr0076124|FBtr0076128|FBtr0076125 11700089|11699494|11700089|11700089|11700089 11700696|11700696|11700696|11700696|11700696 3L - 11700607 11700690 3'utr CG11658 FlyBase G36220.1 TGTTCGGACCAAGGGAGAGAGATAGAGATAGATCGAAAGTATTTTTACGGCCCAGTGGATAGGTTGTTTATGCGTGTGTTAAAG 42 11700667 0.947913067 8 38 162 0.914893617 1.33243846 0.170212766 0.119047619 0.212765957 42 3 1 43 3L:11700607-11700690 6 CG11658 FBtr0076127|FBtr0076125|FBtr0076128|FBtr0076124|FBtr0076126 11700089|11700089|11700089|11700089|11699494 11700696|11700696|11700696|11700696|11700696 AGTATT 6mer2-7 dme-miR-8-3p 3L - 11700604 11700687 3'utr CG11658 FlyBase G27376.1 TCGGACCAAGGGAGAGAGATAGAGATAGATCGAAAGTATTTTTACGGCCCAGTGGATAGGTTGTTTATGCGTGTGTTAAAGTTT 18 11700668 0.971775366 6 15 91 0.851851852 0.884606581 0.222222222 0.388888889 0.592592593 18 2 2 23 3L:11700604-11700687 6 13.5 1698 FBgn0036196 52.87 2.63 4.06 0.255343295 5.133079848 3.325123153 14 15 14.5 0.15 dme-miR-14-3p 6mer3-8 AAGACT 3L 11710554 11710559 + 3L_11710554_11710559_+ 0.732306838 1 0.866153419 0.189287677 Ccdc56 FBtr0302271 11709346 11710570 3L + 11710517 11710565 3'utr Ccdc56 FlyBase G29657.2 AATATGGTAAAATGTATTTAATTAGTTGAGTAAACACAAGACTCTAAAA 25 11710529 0.951517488 6 23 196 0.928571429 1.414973348 0.25 0.12 0.214285714 25 2 0 26 3L:11710517-11710565 6 Ccdc56 FBtr0302271 11709346 11710570 AAGACT 6mer3-8 dme-miR-14-3p 3L + 11710521 11710567 3'utr Ccdc56 FlyBase G22437.1 TGGTAAAATGTATTTAATTAGTTGAGTAAACACAAGACTCTAAAAGC 15 11710561 0.771619591 6 12 79 0.894736842 1.230448921 0.263157895 0.2 0.368421053 15 2 0 17 3L:11710521-11710567 6 9.5 1699 FBgn0261353 446.3333333 35.80333333 54.86333333 0.021284541 0.265338423 0.173157543 25 -7 9 0.15 dme-miR-932-5p 7mer-m8 GGAATTG 3L 11722891 11722897 + 3L_11722891_11722897_+ 0.657821773 0.653914203 0.655867988 0.00276309 Bmcp FBtr0076115|FBtr0076114 11722809|11722809 11728118|11723325 3L + 11722848 11722901 3'utr Bmcp FlyBase G29664.2 GACATATTTTAGCATTCAAACCAAAAAGATCAGATCTGCTGCCGGAATTGGCTT 16 11722887 0.968543687 6 12 65 0.777777778 1.146128036 0.111111111 0.125 0.222222222 16 4 0 14 3L:11722848-11722901 7 Bmcp FBtr0076115|FBtr0076114 11722809|11722809 11728118|11723325 GGAATTG 7mer-m8 dme-miR-932-5p 3L + 11722858 11722901 3'utr Bmcp FlyBase G22443.1 AGCATTCAAACCAAAAAGATCAGATCTGCTGCCGGAATTGGCTT 16 11722886 0.792444751 4 14 62 0.904761905 0.977723605 0.571428571 0.25 0.428571429 16 1 1 19 3L:11722858-11722901 7 9 1700 FBgn0036199 260.3566667 19.57666667 30.33666667 0.034567964 0.459730972 0.296670696 4 5 4.5 0.15 dme-miR-2a-2-5p 8mer-m1 TGATGAGG 3L 11732005 11732012 + 3L_11732005_11732012_+ 0.548702983 0.599537557 0.57412027 0.03594549 CG32088 FBtr0332764 11731940 11732048 3L + 11731956 11732029 3'utr CG32088 FlyBase G29673.1 ATATTCTCATAGACAAAAGCTCTGCATACTATAAATATAGTAAATTGAATGATGAGGCTCAACATATGTCTAAT 57 11732008 0.85941128 8 53 307 0.944444444 1.355387658 0 0.192982456 0.361111111 57 2 2 68 3L:11731956-11732029 8 CG32088 FBtr0332764 11731940 11732048 TGATGAGG 8mer-m1 dme-miR-2a-2-5p 3L + 11731989 11732024 3'utr CG32088 FlyBase G22450.1 AATATAGTAAATTGAATGATGAGGCTCAACATATGT 34 11732008 0.822156221 4 33 161 1 1.73239376 0 0.411764706 0.62962963 34 0 0 54 3L:11731989-11732024 8 41 1701 FBgn0052088 164.3333333 6.503333333 9.94 0.249492901 6.304459252 4.124748491 -3 -3 -3 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3L 11786160 11786166 - 3L_11786160_11786166_- 0.521223493 0.521218584 0.521221038 3.46E-06 Pi3K68D FBtr0076086|FBtr0332055 11786050|11786050 11786625|11786625 3L - 11786146 11786192 5'utr Pi3K68D FlyBase G36244.1 AACCATGTATTACGAAATGAACAAATTGTGATTTGCTGCTACATATA 60 11786166 0.982590998 4 59 452 0.987341772 1.591064607 0.215189873 0.216666667 0.405063291 60 0 1 78 3L:11786146-11786192 7 Pi3K68D FBtr0332055|FBtr0076086 11786050|11786050 11786625|11786625 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 11786151 11786181 5'utr Pi3K68D FlyBase G27394.1 ACGAAATGAACAAATTGTGATTTGCTGCTAC 35 11786160 0.573528481 5 35 263 1 1.785329835 0.245901639 0.457142857 0.68852459 35 0 0 61 3L:11786151-11786181 7 47.5 1702 FBgn0015278 1326.206667 35.56 54.69 0.035816439 1.335770529 0.868531724 0 -6 -3 0.15 dme-miR-995-5p 6mer3-8 AATTCG 3L 11786391 11786396 - 3L_11786391_11786396_- 0.982500826 0.999945827 0.991223327 0.012335478 Pi3K68D FBtr0076086|FBtr0332055 11786050|11786050 11786625|11786625 3L - 11786368 11786413 5'utr Pi3K68D FlyBase G36245.1 ATGTGCCCTCATATCGAAATTCGTGCCTTCCGCTATTGCCGGAATA 11 11786386 0.975210035 4 10 79 0.923076923 1.079181246 0 0.181818182 0.307692308 11 1 0 12 3L:11786368-11786413 6 Pi3K68D FBtr0332055|FBtr0076086 11786050|11786050 11786625|11786625 AATTCG 6mer3-8 dme-miR-995-5p 3L - 11786367 11786414 5'utr Pi3K68D FlyBase G27395.1 TATGTGCCCTCATATCGAAATTCGTGCCTTCCGCTATTGCCGGAATAA 5 11786386 0.975444574 2 5 38 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 3L:11786367-11786414 6 8 1703 FBgn0015278 1326.206667 35.56 54.69 0.006032242 0.224971879 0.146279027 -10 -10 -10 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 3L 11817112 11817118 - 3L_11817112_11817118_- 0.600721797 0.59931087 0.600016333 0.000997657 CG5946 FBtr0302136|FBtr0076078|FBtr0076079|FBtr0301135 11816981|11816693|11816981|11816981 11817143|11817143|11817143|11818073 3L - 11817099 11817141 3'utr CG5946 FlyBase G36256.1 TGATGGACATTATGGGACGAAATTGCATTTTCGTTGTGTTATA 9 11817119 0.893800346 2 9 84 1 0.954242509 0.333333333 0 0 9 0 0 9 3L:11817099-11817141 7 CG5946 FBtr0302136|FBtr0301135|FBtr0076078|FBtr0076079 11816981|11816981|11816693|11816981 11817143|11818073|11817143|11817143 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 11817082 11817131 3'utr CG5946 FlyBase G27399.1 TATGGGACGAAATTGCATTTTCGTTGTGTTATATTCCTCTTTTTTTATCT 6 11817119 0.991119524 2 5 61 0.7 0.84509804 0 0.5 0.7 6 3 0 7 3L:11817082-11817131 7 7 1704 FBgn0036211 623.3566667 60.22666667 92.04666667 0.011229526 0.116227585 0.076048381 1 1 1 0.15 dme-miR-282-5p 6mer2-7 GAGGCT 3L 11823758 11823763 + 3L_11823758_11823763_+ 0.549377824 0.996689002 0.773033413 0.316296783 RpL10Ab FBtr0345073 11823367 11824211 3L + 11823660 11823778 3'utr RpL10Ab FlyBase G29681.1 TGAAGCACATTCCTCGTCCCAAGATGAAGGTGTGCATCCTTGGCGATCAGCAGCATTGCGACGAAGCCAAGGCCAACAACGTCGACTTCATGGATGCCGAGGCTCTGAAGAAGCTGAAC 11 11823765 0.920148591 8 11 43 1 1.176091259 0.4 0.272727273 0.466666667 11 0 0 15 3L:11823660-11823778 6 RpL10Ab FBtr0345073 11823367 11824211 GAGGCT 6mer2-7 dme-miR-282-5p 3L + 11823736 11823820 3'utr RpL10Ab FlyBase G22458.1 CAACGTCGACTTCATGGATGCCGAGGCTCTGAAGAAGCTGAACAAGAACAAGAAGCTGGTGAAGAAGCTGGCCAAGTCCTATGAT 14 11823753 0.948949484 10 13 54 0.958333333 1.06069784 0.458333333 0.428571429 0.666666667 14 0 1 23 3L:11823736-11823820 6 6.5 1705 FBgn0036213 2531.526667 421.71 637.3866667 0.002567621 0.015413436 0.010197891 -7 5 -1 0.15 dme-miR-276a-3p 6mer3-8 AGTTCC 3L 11823894 11823899 + 3L_11823894_11823899_+ 0.834960957 0.933536783 0.88424887 0.069703617 RpL10Ab FBtr0345073 11823367 11824211 3L + 11823859 11824035 3'utr RpL10Ab FlyBase G29682.2 TCGTTTGCTTGGCCCTGGCTTGAACAAGGCCGGCAAGTTCCCTGCCCTGCTGTCGCATCAGGAGTCTATGATTGGCAAGATCGAGGAGGTTAAGTCGACCATCAAGTTCCAGATGAAGAAGGTGCTCTGCCTGTCCGTCGCCGTCGGCCACGTTGGCATGAAGTCCGACGAGCTGGC 36 11823896 0.965619748 17 35 166 0.977272727 1.633468456 0.363636364 0.166666667 0.318181818 36 1 0 43 3L:11823859-11824035 6 RpL10Ab FBtr0345073 11823367 11824211 AGTTCC 6mer3-8 dme-miR-276a-3p 3L + 11823827 11823937 3'utr RpL10Ab FlyBase G22459.1 CTGGCCTCTGAGTCGCTGATCAAGCAGATTCCTCGTTTGCTTGGCCCTGGCTTGAACAAGGCCGGCAAGTTCCCTGCCCTGCTGTCGCATCAGGAGTCTATGATTGGCAAG 18 11823896 0.9707545 10 17 97 0.96 1.380211242 0.44 0.388888889 0.56 18 1 0 24 3L:11823827-11823937 6 9.5 1706 FBgn0036213 2531.526667 421.71 637.3866667 0.003752676 0.022527329 0.01490461 -2 -2 -2 0.15 dme-miR-965-3p 8mer-A1 TACGCTTA 3L 11826959 11826966 - 3L_11826959_11826966_- 0.625195581 0.625225654 0.625210617 2.13E-05 CycA FBtr0304650 11826717 11827651 3L - 11826842 11827051 3'utr CycA FlyBase G36271.1 TAAAAAACTCACACTGATCGTGCTCAGAACGGCAGGCAGCCGTGGAATGTTGCTAAACTCTTGTTCTTGTAATCTTGTAATCTTATACGCTTACTAAATGTTTACTAAACTTAGTCTAGACCATCTTGCGACCACATATGTAGCTAGAATAGAGCGCTGCCGAAATGCGTACAGCCAGATGATGGGTCTTACTTTACACTTAGGTTTATG 90 11826967 0.953024251 28 82 708 0.91509434 1.384711743 0.150943396 0.166666667 0.29245283 90 6 3 97 3L:11826842-11827051 8 CycA FBtr0304650 11826717 11827651 TACGCTTA 8mer-A1 dme-miR-965-3p 3L - 11826893 11827009 3'utr CycA FlyBase G27411.1 TGGAATGTTGCTAAACTCTTGTTCTTGTAATCTTGTAATCTTATACGCTTACTAAATGTTTACTAAACTTAGTCTAGACCATCTTGCGACCACATATGTAGCTAGAATAGAGCGCTG 55 11826967 0.849991589 14 47 549 0.845238095 1.374137094 0.154761905 0.436363636 0.630952381 55 11 2 71 3L:11826893-11827009 8 43 1707 FBgn0000404 2869.163333 125.9133333 194.37 0.014986947 0.341504739 0.221227556 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 11827114 11827119 - 3L_11827114_11827119_- 0.999998786 0.999972856 0.999985821 1.83E-05 CycA FBtr0076075|FBtr0076075|FBtr0076075|FBtr0304650|FBtr0304650|FBtr0304650 11827081|11827081|11827081|11826717|11826717|11826717 11827651|11827651|11827651|11827651|11827651|11827651 3L - 11827097 11827140 3'utr CycA FlyBase G36272.1 ACTATTTACTCCGTAAATGTTCTGTGAACTCCAAAACAAATATA 26 11827120 0.973508664 6 24 185 0.944444444 1.230448921 0 0.230769231 0.444444444 26 1 1 34 3L:11827097-11827140 6 CycA FBtr0076075|FBtr0076075|FBtr0076075|FBtr0304650|FBtr0304650|FBtr0304650 11827081|11827081|11827081|11826717|11826717|11826717 11827651|11827651|11827651|11827651|11827651|11827651 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 11827099 11827140 3'utr CycA FlyBase G27413.1 ACTATTTACTCCGTAAATGTTCTGTGAACTCCAAAACAAATA 27 11827120 0.804497104 7 26 192 0.951219512 1.591064607 0.048780488 0.37037037 0.585365854 27 2 0 39 3L:11827099-11827140 6 25.5 1708 FBgn0000404 2869.163333 125.9133333 194.37 0.008887608 0.202520252 0.131193085 1 1 1 0.15 dme-miR-79-3p 7mer-A1 AGCTTTA 3L 11993631 11993637 - 3L_11993631_11993637_- 0.810409666 0.807069664 0.808739665 0.002361737 Grip163 FBtr0076061 11993272 11993752 3L - 11993623 11993685 3'utr Grip163 FlyBase G36299.1 TATGCATGCATGGCGTCTCCTAAATGTAAAGCTTCGGTGAAGAAAATCAGCTTTAAAGGCATT 19 11993639 0.951815006 5 18 106 0.954545455 1.021189299 0.045454545 0.105263158 0.227272727 19 0 1 21 3L:11993623-11993685 7 Grip163 FBtr0076061 11993272 11993752 AGCTTTA 7mer-A1 dme-miR-79-3p 3L - 11993616 11993685 3'utr Grip163 FlyBase G27430.1 TATGCATGCATGGCGTCTCCTAAATGTAAAGCTTCGGTGAAGAAAATCAGCTTTAAAGGCATTTATTTCT 16 11993639 0.967071286 4 15 86 0.947368421 1.255272505 0.210526316 0.125 0.263157895 16 1 0 18 3L:11993616-11993685 7 13 1709 FBgn0026432 421 10.95666667 16.75333333 0.03087886 1.186492242 0.775964982 2 2 2 0.15 dme-miR-31a-5p 8mer-A1 TCTTGCCA 3L 11993719 11993726 - 3L_11993719_11993726_- 0.38813714 0.392024888 0.390081014 0.00274909 Grip163 FBtr0076061 11993272 11993752 3L - 11993699 11993875 stop_codon Grip163 FlyBase G36300.1 AAGGCGGCCGCTTCTGGTTACCAGGAGGAAATCGGTGACCTGATTTGTATTATTAACTTTAACCACTATTACAAGGTATCTGGGAACCATACTGGTTCCTCAATGGAGGACAAAAAGTGCTAGCCAATAATTGTTAGATAGGGAATTTATCTTGCCATTAAGCTGAGCTTAGAACAT 70 11993718 0.949236192 14 68 606 0.976190476 1.913813852 0.154761905 0.171428571 0.30952381 70 2 0 82 3L:11993699-11993875 8 Grip163 FBtr0076061 11993272 11993752 TCTTGCCA 8mer-A1 dme-miR-31a-5p 3L - 11993701 11993853 stop_codon Grip163 FlyBase G27431.1 AGGAGGAAATCGGTGACCTGATTTGTATTATTAACTTTAACCACTATTACAAGGTATCTGGGAACCATACTGGTTCCTCAATGGAGGACAAAAAGTGCTAGCCAATAATTGTTAGATAGGGAATTTATCTTGCCATTAAGCTGAGCTTAGAAC 43 11993718 0.895317004 12 42 352 0.958333333 1.236789099 0.097222222 0.441860465 0.666666667 43 0 3 69 3L:11993701-11993853 8 22 1710 FBgn0026432 421 10.95666667 16.75333333 0.052256532 2.007909948 1.313171508 -8 -8 -8 0.15 dme-miR-305-5p 6mer2-7 GTACAA 3L 12121859 12121864 - 3L_12121859_12121864_- 0.961976306 0.958152989 0.960064647 0.002703481 yps FBtr0305992|FBtr0076027 12121272|12121678 12122663|12122106 3L - 12121827 12121890 3'utr yps FlyBase G36314.1 TAGTTTCGTAGGGCAGAGAATCAATTGTACAACTCATACCACAACAAAACTAACATCCTCAAAA 31 12121866 0.964967945 3 31 162 1 1.556302501 0.361111111 0.161290323 0.277777778 31 0 0 36 3L:12121827-12121890 6 yps FBtr0305992|FBtr0076027 12121272|12121678 12122663|12122106 GTACAA 6mer2-7 dme-miR-305-5p 3L - 12121846 12121884 3'utr yps FlyBase G27441.1 CGTAGGGCAGAGAATCAATTGTACAACTCATACCACAAC 11 12121866 0.867847302 2 9 45 0.941176471 1.204119983 0.411764706 0.363636364 0.588235294 11 1 0 16 3L:12121846-12121884 6 19.5 1711 FBgn0022959 5324.54 265.4 408.5666667 0.003662288 0.073474002 0.047727829 2 2 2 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 3L 12143112 12143119 + 3L_12143112_12143119_+ 0.643549613 0.643546547 0.64354808 2.19E-06 RhoGAP68F FBtr0334092|FBtr0334091|FBtr0075997|FBtr0334093 12142827|12142827|12142827|12142827 12143380|12143380|12143380|12143380 3L + 12143062 12143135 3'utr RhoGAP68F FlyBase G29720.1 CCGAAAATCACAATTATTTACCCCCAACAAGCGCTTAATACGATTGATTTACCAAAGAAATTTGCTCGTGTTCG 31 12143111 0.974028894 8 30 186 0.974358974 1.278753601 0.128205128 0.225806452 0.384615385 31 0 1 38 3L:12143062-12143135 8 RhoGAP68F FBtr0334093|FBtr0075997|FBtr0334091|FBtr0334092 12142827|12142827|12142827|12142827 12143380|12143380|12143380|12143380 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 12143083 12143131 3'utr RhoGAP68F FlyBase G22497.1 CCCCAACAAGCGCTTAATACGATTGATTTACCAAAGAAATTTGCTCGTG 22 12143111 0.979592546 4 20 133 0.903225806 1.146128036 0.258064516 0.272727273 0.483870968 22 2 1 28 3L:12143083-12143131 8 23.5 1712 FBgn0036257 644.8233333 34.92 53.27666667 0.036444091 0.672966781 0.441093662 1 1 1 0.15 dme-miR-283-5p 6mer3-8 TGATAT 3L 12143161 12143166 + 3L_12143161_12143166_+ 0.534483585 0.985064773 0.759774179 0.318609022 RhoGAP68F FBtr0334092|FBtr0334091|FBtr0075997|FBtr0334093 12142827|12142827|12142827|12142827 12143380|12143380|12143380|12143380 3L + 12143137 12143186 3'utr RhoGAP68F FlyBase G29721.1 TATGCGACGAACAGGAGAGAAATTTGATATGAGATGTTATTATTATATAC 13 12143162 0.828116581 6 12 92 0.866666667 1.113943352 0.2 0.153846154 0.266666667 13 2 0 13 3L:12143137-12143186 6 RhoGAP68F FBtr0334093|FBtr0075997|FBtr0334091|FBtr0334092 12142827|12142827|12142827|12142827 12143380|12143380|12143380|12143380 TGATAT 6mer3-8 dme-miR-283-5p 3L + 12143140 12143172 3'utr RhoGAP68F FlyBase G22498.1 GCGACGAACAGGAGAGAAATTTGATATGAGATG 8 12143161 0.934356752 2 7 28 1 1 0.5 0.25 0.4 8 0 0 10 3L:12143140-12143172 6 10 1713 FBgn0036257 644.8233333 34.92 53.27666667 0.015508124 0.286368843 0.187699431 -1 0 -0.5 0.15 dme-miR-1006-3p 6mer2-7 GAATTT 3L 12143308 12143313 + 3L_12143308_12143313_+ 0.999999998 0.999998599 0.999999299 9.90E-07 RhoGAP68F FBtr0334092|FBtr0334091|FBtr0075997|FBtr0334093 12142827|12142827|12142827|12142827 12143380|12143380|12143380|12143380 3L + 12143266 12143329 3'utr RhoGAP68F FlyBase G29723.1 AGTGGAGTTGTGGCGAACTCAAAAATCGTACTGTGTAGTCTTGAATTTCCTTATAGTCATACAA 14 12143311 0.993605789 7 10 119 0.764705882 1.113943352 0.176470588 0.142857143 0.294117647 14 4 0 13 3L:12143266-12143329 6 RhoGAP68F FBtr0334093|FBtr0075997|FBtr0334091|FBtr0334092 12142827|12142827|12142827|12142827 12143380|12143380|12143380|12143380 GAATTT 6mer2-7 dme-miR-1006-3p 3L + 12143287 12143331 3'utr RhoGAP68F FlyBase G22500.1 AAAATCGTACTGTGTAGTCTTGAATTTCCTTATAGTCATACAAAC 7 12143316 0.652171008 5 6 64 0.888888889 0.903089987 0 0.285714286 0.444444444 7 1 0 8 3L:12143287-12143331 6 8 1714 FBgn0036257 644.8233333 34.92 53.27666667 0.012406499 0.229095074 0.150159545 -3 -8 -5.5 0.15 dme-miR-34-5p 8mer-A1 CACTGCCA 3L 12156412 12156419 + 3L_12156412_12156419_+ 0.678404994 0.678389878 0.678397436 1.07E-05 Nrx-IV FBtr0075999|FBtr0075998 12156240|12156240 12156990|12156990 3L + 12156394 12156468 3'utr Nrx-IV FlyBase G29736.1 AGAAAATACTTTTCCATGCACTGCCAATTGTTTTGCGCAAGTAAATGCTAAGATTTGATTTATAATTGGTTGGCT 20 12156410 0.985961967 6 20 165 1 1.397940009 0.32 0.25 0.4 20 0 0 25 3L:12156394-12156468 8 Nrx-IV FBtr0075999|FBtr0075998 12156240|12156240 12156990|12156990 CACTGCCA 8mer-A1 dme-miR-34-5p 3L + 12156339 12156426 3'utr Nrx-IV FlyBase G22508.1 GAGAACGAAGTGAAAATCAAATAGACACGGAAAAGGCTCACCACGCATAACAGACAGAAAATACTTTTCCATGCACTGCCAATTGTTT 18 12156410 0.979549987 4 18 123 1 1.447158031 0.357142857 0.333333333 0.571428571 18 0 0 28 3L:12156339-12156426 8 16.5 1715 FBgn0013997 1120.423333 27.23333333 41.64333333 0.014726577 0.605875153 0.396221884 2 2 2 0.15 dme-miR-184-3p 7mer-A1 CCGTCCA 3L 12156548 12156554 + 3L_12156548_12156554_+ 0.822175942 0.822393597 0.822284769 0.000153937 Nrx-IV FBtr0075999|FBtr0075998 12156240|12156240 12156990|12156990 3L + 12156491 12156571 3'utr Nrx-IV FlyBase G29737.1 TTTTTAGTCTTTGGTTCTGTCTGACGGCATTATTGAAATTTCTTCTATCACAGAATACCGTCCATTTTTAGTTAATTTTAT 469 12156546 0.960489492 18 449 4593 0.956603774 1.625826713 0.020754717 0.1108742 0.213207547 469 12 11 507 3L:12156491-12156571 7 Nrx-IV FBtr0075999|FBtr0075998 12156240|12156240 12156990|12156990 CCGTCCA 7mer-A1 dme-miR-184-3p 3L + 12156496 12156571 3'utr Nrx-IV FlyBase G22509.1 AGTCTTTGGTTCTGTCTGACGGCATTATTGAAATTTCTTCTATCACAGAATACCGTCCATTTTTAGTTAATTTTAT 187 12156546 0.951413117 15 173 1622 0.91634981 1.302835797 0.02661597 0.320855615 0.517110266 187 11 11 241 3L:12156496-12156571 7 316.5 1716 FBgn0013997 1120.423333 27.23333333 41.64333333 0.282482514 11.62178703 7.600256143 2 2 2 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 3L 12156856 12156861 + 3L_12156856_12156861_+ 0.999615301 0.997141217 0.998378259 0.001749453 Nrx-IV FBtr0075999|FBtr0075998 12156240|12156240 12156990|12156990 3L + 12156824 12156884 3'utr Nrx-IV FlyBase G29739.1 ATTGTATTTTTGGAAAATGCATTTTGAACGTCTTGACTTGAAATTTTCAAATATACATTAG 17 12156856 0.832425744 7 17 137 1 1.342422681 0.090909091 0.235294118 0.409090909 17 0 0 22 3L:12156824-12156884 6 Nrx-IV FBtr0075999|FBtr0075998 12156240|12156240 12156990|12156990 TTGACT 6mer3-8 dme-miR-1012-3p 3L + 12156844 12156876 3'utr Nrx-IV FlyBase G22511.1 ATTTTGAACGTCTTGACTTGAAATTTTCAAATA 17 12156856 0.767644613 2 16 129 0.961538462 1.096910013 0 0.352941176 0.576923077 17 0 1 25 3L:12156844-12156876 6 15.5 1717 FBgn0013997 1120.423333 27.23333333 41.64333333 0.013834057 0.569155447 0.372208437 0 0 0 0.15 dme-miR-8-3p 7mer-m8 CAGTATT 3L 12269248 12269254 + 3L_12269248_12269254_+ 0.661615145 0.661615243 0.661615194 7.07E-08 CG32100 FBtr0076006 12269199 12269803 3L + 12269231 12269286 3'utr CG32100 FlyBase G29741.1 TATATCGTTAGTGCACTCAGTATTTTCTGTTTGTTATGATTAGCTATAGATTCCTT 11 12269247 0.89090119 6 11 138 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 3L:12269231-12269286 7 CG32100 FBtr0076006 12269199 12269803 CAGTATT 7mer-m8 dme-miR-8-3p 3L + 12269231 12269276 3'utr CG32100 FlyBase G22512.1 TATATCGTTAGTGCACTCAGTATTTTCTGTTTGTTATGATTAGCTA 8 12269255 0.991115255 5 8 88 1 1.113943352 0 0.5 0.692307692 8 0 0 13 3L:12269231-12269276 7 8.5 1718 FBgn0052100 96.87 5.46 8.436666667 0.087746464 1.556776557 1.007506914 1 -7 -3 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3L 12269620 12269626 + 3L_12269620_12269626_+ 0.518050534 0.521223622 0.519637078 0.002243721 CG32100 FBtr0076006 12269199 12269803 3L + 12269578 12269705 3'utr CG32100 FlyBase G29742.1 AGAGCCGGATCCAATTGTTTATGTACTTAATGCATTTGATTTTGTGATTTTAATCTTTTCGTAAGACTCGAAACTGGTACCAATTTAGCAAGTAAGCTCCAGCCAGTGTTCAATGCTCACCGTAGCCC 16 12269599 0.99013347 9 16 160 1 1.342422681 0.090909091 0.25 0.454545455 16 0 0 22 3L:12269578-12269705 7 CG32100 FBtr0076006 12269199 12269803 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 12269590 12269629 3'utr CG32100 FlyBase G22513.1 AATTGTTTATGTACTTAATGCATTTGATTTTGTGATTTTA 5 12269627 0.993685563 3 4 47 0.692307692 0.954242509 0.307692308 0.6 0.846153846 5 4 0 9 3L:12269590-12269629 7 5 1719 FBgn0052100 96.87 5.46 8.436666667 0.051615567 0.915750916 0.592651126 21 -7 7 0.15 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 3L 12270036 12270041 - 3L_12270036_12270041_- 0.95922174 0.934081625 0.946651682 0.017776735 Pbgs FBtr0076011|FBtr0076011|FBtr0333357|FBtr0333357 12269966|12269966|12269450|12269450 12270291|12270291|12270291|12270291 3L - 12270031 12270082 3'utr Pbgs FlyBase G36359.1 ATTTTACCGATTAAGTGGCTTAAATAAGACTCAAAGGCTTTTACTTACATCA 59 12270042 0.802408982 8 55 364 0.943661972 1.348953548 0.056338028 0.203389831 0.338028169 59 2 2 67 3L:12270031-12270082 6 Pbgs FBtr0076011|FBtr0076011|FBtr0333357|FBtr0333357 12269966|12269966|12269450|12269450 12270291|12270291|12270291|12270291 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 3L - 12270029 12270082 3'utr Pbgs FlyBase G27466.1 ATTTTACCGATTAAGTGGCTTAAATAAGACTCAAAGGCTTTTACTTACATCAAT 28 12270042 0.971497265 7 27 162 0.971428571 1.230448921 0.171428571 0.142857143 0.314285714 28 0 1 34 3L:12270029-12270082 6 23.5 1720 FBgn0036271 224.0566667 17.76333333 27 0.104884181 1.322949897 0.87037037 1 1 1 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3L 12281123 12281129 + 3L_12281123_12281129_+ 0.823296632 0.822329963 0.822813298 0.000683489 CG10426 FBtr0076007|FBtr0333356 12281032|12281032 12281476|12281476 3L + 12281086 12281153 3'utr CG10426 FlyBase G29745.1 TGAAATCTATTTAGTCATTTACTCGAATCTCAAAGTGCTAGTCAAAGCTTTCCTACGGTTGTGCGACG 30 12281103 0.896095075 9 24 219 0.777777778 0.970036777 0.305555556 0.2 0.333333333 30 6 2 28 3L:12281086-12281153 7 CG10426 FBtr0333356|FBtr0076007 12281032|12281032 12281476|12281476 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L + 12281085 12281156 3'utr CG10426 FlyBase G22514.1 TTGAAATCTATTTAGTCATTTACTCGAATCTCAAAGTGCTAGTCAAAGCTTTCCTACGGTTGTGCGACGCCT 24 12281121 0.960811269 12 22 166 0.971428571 1.230448921 0.085714286 0.333333333 0.542857143 24 0 1 34 3L:12281085-12281156 7 18 1721 FBgn0036273 103.6666667 4.046666667 6.22 0.173633441 4.448105437 2.893890675 20 2 11 0.15 dme-miR-304-5p 8mer-A1 TGAGATTA 3L 12281298 12281305 + 3L_12281298_12281305_+ 0.611544832 0.562923836 0.587234334 0.034380239 CG10426 FBtr0076007|FBtr0333356 12281032|12281032 12281476|12281476 3L + 12281222 12281377 3'utr CG10426 FlyBase G29746.1 TACTTACCCTGCAATGCTGCGGTAGATCTTAGGCGCTGCCTTTCGCCTCGAGGCCTTAGTCGTAATACGTTCCTTATGAGATTATCTAATACATACTCGTGCAACAATTCTGTACCTCTACTCTGAAGCACAAGCTTAGTTCGTAGATAAACTAAA 70 12281298 0.865425051 18 69 510 0.977272727 1.934498451 0.113636364 0.214285714 0.375 70 2 0 86 3L:12281222-12281377 8 CG10426 FBtr0333356|FBtr0076007 12281032|12281032 12281476|12281476 TGAGATTA 8mer-A1 dme-miR-304-5p 3L + 12281227 12281310 3'utr CG10426 FlyBase G22515.1 ACCCTGCAATGCTGCGGTAGATCTTAGGCGCTGCCTTTCGCCTCGAGGCCTTAGTCGTAATACGTTCCTTATGAGATTATCTAA 22 12281297 0.988781921 11 20 183 0.935483871 1.462397998 0.129032258 0.318181818 0.516129032 22 2 0 29 3L:12281227-12281310 8 16.5 1722 FBgn0036273 103.6666667 4.046666667 6.22 0.159163987 4.077429984 2.652733119 0 1 0.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 12281333 12281338 + 3L_12281333_12281338_+ 0.999865816 0.999629862 0.999747839 0.000166806 CG10426 FBtr0076007|FBtr0333356 12281032|12281032 12281476|12281476 3L + 12281222 12281377 3'utr CG10426 FlyBase G29746.1 TACTTACCCTGCAATGCTGCGGTAGATCTTAGGCGCTGCCTTTCGCCTCGAGGCCTTAGTCGTAATACGTTCCTTATGAGATTATCTAATACATACTCGTGCAACAATTCTGTACCTCTACTCTGAAGCACAAGCTTAGTTCGTAGATAAACTAAA 70 12281332 0.865425051 18 69 510 0.977272727 1.934498451 0.113636364 0.214285714 0.375 70 2 0 86 3L:12281222-12281377 6 CG10426 FBtr0333356|FBtr0076007 12281032|12281032 12281476|12281476 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 12281314 12281359 3'utr CG10426 FlyBase G22516.1 ATACTCGTGCAACAATTCTGTACCTCTACTCTGAAGCACAAGCTTA 21 12281332 0.97958391 5 20 141 0.933333333 0.970036777 0 0.333333333 0.533333333 21 0 2 28 3L:12281314-12281359 6 28.5 1723 FBgn0036273 103.6666667 4.046666667 6.22 0.274919614 7.042833608 4.581993569 1 1 1 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 3L 12402673 12402678 - 3L_12402673_12402678_- 0.755339097 0.793084721 0.774211909 0.02669017 CG32103 FBtr0332090 12402293 12404054 3L - 12402656 12402691 3'utr CG32103 FlyBase G36373.1 ACACTTGAATCATTTGACTTGATCATTAAAAATCAC 13 12402678 0.971147033 5 13 102 1 1.255272505 0 0.230769231 0.444444444 13 0 0 18 3L:12402656-12402691 6 CG32103 FBtr0332090 12402293 12404054 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 12402653 12402689 3'utr CG32103 FlyBase G27476.1 ACTTGAATCATTTGACTTGATCATTAAAAATCACCCA 12 12402678 0.978657028 4 11 97 0.947368421 1.255272505 0.052631579 0.5 0.684210526 12 1 0 18 3L:12402653-12402689 6 12.5 1724 FBgn0052103 1942.393333 66.43 101.62 0.00643536 0.188167996 0.123007282 0 0 0 0.15 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 12402929 12402934 - 3L_12402929_12402934_- 0.999411194 0.999784208 0.999597701 0.000263751 CG32103 FBtr0332090 12402293 12404054 3L - 12402897 12402978 3'utr CG32103 FlyBase G36375.1 AACCAACACAATACCCATACACCATGTAATTTATTTGATATATCATGTGAATCTGAAGCCGATCGCAAAACCGACCAATCAT 48 12402931 0.999981988 12 42 286 0.883333333 1.122215878 0.166666667 0.208333333 0.366666667 48 4 3 53 3L:12402897-12402978 6 CG32103 FBtr0332090 12402293 12404054 ATGTGA 6mer3-8 dme-miR-1003-3p 3L - 12402911 12402960 3'utr CG32103 FlyBase G27479.1 ACACCATGTAATTTATTTGATATATCATGTGAATCTGAAGCCGATCGCAA 24 12402931 0.739951906 8 22 159 0.896551724 1.414973348 0.275862069 0.208333333 0.344827586 24 3 0 26 3L:12402911-12402960 6 29.5 1725 FBgn0052103 1942.393333 66.43 101.62 0.015187449 0.444076471 0.290297186 -3 -3 -3 0.15 dme-miR-2a-2-5p 6mer3-8 TGATGA 3L 12403209 12403214 - 3L_12403209_12403214_- 0.814510403 0.85734224 0.835926322 0.030286656 CG32103 FBtr0332090 12402293 12404054 3L - 12403051 12403451 3'utr CG32103 FlyBase G36377.1 AGTTCGTCCCATCCGACTGCTTTCGAAAGCGAATTAGCTTAGCATAAATCAGAGTGAGCCAGGCAGGCGGATTGCGAGTGGGAATCAGGTATCTGAAATCGAGGGATAGACGGATGGATACGGATACTCGGCAGCGTTTAAGCTTAAACACAAAAGACATTAAAACTACGATGTACTCGTTTTTGCTTAGATTAATCGATTACACAAAAAAATGAGAAACACTTAACGTTTACAATGTGATGATAATAGTTTATAATATACACATATAAATACATATAACTATACCTATACCTACTAAAATACCGACTTGTAAGCTTCAAATAGCTGTCGCAGTCTCTTGAGCAAGTTCGGCGGCGAGGCTGAAGAAAACTTTGTAGCATTTTATTTGTTAAGTTTAGTAA 255 12403221 0.887726428 61 235 1896 0.920792079 1.600506163 0.191419142 0.164705882 0.297029703 255 18 6 279 3L:12403051-12403451 6 CG32103 FBtr0332090 12402293 12404054 TGATGA 6mer3-8 dme-miR-2a-2-5p 3L - 12403062 12403240 3'utr CG32103 FlyBase G27481.1 ATGAGAAACACTTAACGTTTACAATGTGATGATAATAGTTTATAATATACACATATAAATACATATAACTATACCTATACCTACTAAAATACCGACTTGTAAGCTTCAAATAGCTGTCGCAGTCTCTTGAGCAAGTTCGGCGGCGAGGCTGAAGAAAACTTTGTAGCATTTTATTTGTT 145 12403208 0.987390968 33 134 1198 0.942477876 1.851258349 0.172566372 0.413793103 0.623893805 145 11 2 213 3L:12403062-12403240 6 102 1726 FBgn0052103 1942.393333 66.43 101.62 0.052512536 1.535450851 1.003739421 7 -6 0.5 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 12403695 12403700 - 3L_12403695_12403700_- 0.973583836 0.999262916 0.986423376 0.018157866 CG32103 FBtr0075982|FBtr0332090|FBtr0075983|FBtr0332089 12403503|12402293|12403503|12403503 12404054|12404054|12404054|12404054 3L - 12403625 12403745 3'utr CG32103 FlyBase G36379.1 TCTTAAAATATAAAATAAGTGATACTATGGCTAATTTATTTATAAACCAAACGCAAAGGAGAAAATGCAACATTTTGCCGTGTGCTAATCCCAAAACATTTCTTAGGCCAACAATCCTGCG 63 12403730 0.83280044 18 57 436 0.888888889 1.329058719 0.125 0.126984127 0.236111111 63 6 2 64 3L:12403625-12403745 6 CG32103 FBtr0332089|FBtr0075983|FBtr0332090|FBtr0075982 12403503|12403503|12402293|12403503 12404054|12404054|12404054|12404054 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 12403696 12403752 3'utr CG32103 FlyBase G27484.2 GTTATTTTCTTAAAATATAAAATAAGTGATACTATGGCTAATTTATTTATAAACCAA 31 12403730 0.859749123 7 29 238 0.947368421 1.556302501 0.026315789 0.225806452 0.368421053 31 2 0 36 3L:12403696-12403752 4 5 1727 FBgn0052103 1942.393333 66.43 101.62 0.002574144 0.075267199 0.049202913 30 30 30 0.15 dme-miR-1008-3p 6mer2-7 GCTGTG 3L 12403920 12403925 - 3L_12403920_12403925_- 0.999999999 0.999996015 0.999998007 2.83E-06 CG32103 FBtr0075982|FBtr0332090|FBtr0075983|FBtr0332089 12403503|12402293|12403503|12403503 12404054|12404054|12404054|12404054 3L - 12403828 12403946 3'utr CG32103 FlyBase G36380.2 GCGGCTGGTGATCCGGCTGACGCTGTGCTCCATTTTGTATAGTAGTAGCGTTAGGTTAAGTCGGCTCGGTGGTCGCCACTCGCTCTCTGCCGCAATGAGACAGTCTCGTGCTGCTTCTT 70 12403923 0.898326283 26 67 440 0.963414634 1.897627091 0.170731707 0.142857143 0.268292683 70 3 0 79 3L:12403828-12403946 6 CG32103 FBtr0332089|FBtr0075983|FBtr0332090|FBtr0075982 12403503|12403503|12402293|12403503 12404054|12404054|12404054|12404054 GCTGTG 6mer2-7 dme-miR-1008-3p 3L - 12403783 12403948 3'utr CG32103 FlyBase G27485.1 GTGCGGCTGGTGATCCGGCTGACGCTGTGCTCCATTTTGTATAGTAGTAGCGTTAGGTTAAGTCGGCTCGGTGGTCGCCACTCGCTCTCTGCCGCAATGAGACAGTCTCGTGCTGCTTCTTTCCTTAAGTGTAAAGCAGGCCTCTTCCACGTTCTGGGTTATCCGT 100 12403923 0.885428329 29 92 636 0.909722222 1.640150041 0.201388889 0.32 0.527777778 100 11 2 131 3L:12403783-12403948 6 25.5 1728 FBgn0052103 1942.393333 66.43 101.62 0.013128134 0.383862713 0.250934855 -2 -2 -2 0.15 dme-miR-999-3p 6mer2-7 GTTAAC 3L 12404020 12404025 - 3L_12404020_12404025_- 0.99999999 0.999983105 0.999991548 1.20E-05 CG32103 FBtr0075982|FBtr0332090|FBtr0075983|FBtr0332089 12403503|12402293|12403503|12403503 12404054|12404054|12404054|12404054 3L - 12403953 12404085 stop_codon CG32103 FlyBase G36381.1 GAGTCGCGCCCTGGGCATTAAGATGTCGTGAGATGTCTGTCTTAATCTCGTTCCAATCAGGTTAACTCGGCTCGGCCCGGCCACCTCGGCTCTGCGGCCCCGCTCTGCAGGGCGGATCGGGCTGCGGCCGGGA 34 12404024 0.969390692 16 32 179 0.955555556 1.633468456 0.2 0.235294118 0.422222222 34 2 0 43 3L:12403953-12404085 6 CG32103 FBtr0332089|FBtr0075983|FBtr0332090|FBtr0075982 12403503|12403503|12402293|12403503 12404054|12404054|12404054|12404054 GTTAAC 6mer2-7 dme-miR-999-3p 3L - 12403953 12404147 stop_codon CG32103 FlyBase G27486.1 ACGCCAAACTTCCTCAAGGTCCTGCCGGCGGTGTCCATCAGCTACGTGGTGTACGAGTATACGAGTCGCGCCCTGGGCATTAAGATGTCGTGAGATGTCTGTCTTAATCTCGTTCCAATCAGGTTAACTCGGCTCGGCCCGGCCACCTCGGCTCTGCGGCCCCGCTCTGCAGGGCGGATCGGGCTGCGGCCGGGA 40 12404024 0.958947606 19 31 177 0.830508475 1.389166084 0.152542373 0.35 0.559322034 40 9 1 49 3L:12403953-12404147 6 15 1729 FBgn0052103 1942.393333 66.43 101.62 0.007722432 0.225801596 0.147608738 -1 -1 -1 0.15 dme-miR-8-3p 6mer3-8 CAGTAT 3L 1241811 1241816 - 3L_1241811_1241816_- 0.999569043 0.963632926 0.981600984 0.02541066 Klp61F FBtr0072733 1241566 1241967 3L - 1241773 1241918 3'utr Klp61F FlyBase G33227.1 TTAGTGGATTTCGGATCGCTGTGTTTGTTTGGCTCTTCTGGATATTCATTTTATCTGTATATCAATCTTTGGAATTTCGTACATTTATTATTTAAATAAACTCAGTATGCTATGTAAAGTTAAGGAAATCTTTAGTTCAAGTGCAG 16 1241813 0.989109591 14 15 147 0.909090909 1.301029996 0.227272727 0.25 0.454545455 16 2 0 20 3L:1241773-1241918 6 Klp61F FBtr0072733 1241566 1241967 CAGTAT 6mer3-8 dme-miR-8-3p 3L - 1241765 1241867 3'utr Klp61F FlyBase G25139.1 TATCTGTATATCAATCTTTGGAATTTCGTACATTTATTATTTAAATAAACTCAGTATGCTATGTAAAGTTAAGGAAATCTTTAGTTCAAGTGCAGGTTTAAGA 17 1241813 0.990546451 11 16 152 0.868421053 1.51851394 0.157894737 0.647058824 0.842105263 17 5 0 33 3L:1241765-1241867 6 7 1730 FBgn0004378 1433.893333 44.94333333 69.04666667 0.004881814 0.155751687 0.101380709 -3 -3 -3 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 3L 1241894 1241899 - 3L_1241894_1241899_- 0.675231691 0.745486836 0.710359264 0.049677858 Klp61F FBtr0072733 1241566 1241967 3L - 1241773 1241918 3'utr Klp61F FlyBase G33227.1 TTAGTGGATTTCGGATCGCTGTGTTTGTTTGGCTCTTCTGGATATTCATTTTATCTGTATATCAATCTTTGGAATTTCGTACATTTATTATTTAAATAAACTCAGTATGCTATGTAAAGTTAAGGAAATCTTTAGTTCAAGTGCAG 16 1241896 0.989109591 14 15 147 0.909090909 1.301029996 0.227272727 0.25 0.454545455 16 2 0 20 3L:1241773-1241918 6 Klp61F FBtr0072733 1241566 1241967 TGTGTT 6mer3-8 dme-miR-317-3p 3L - 1241886 1241930 3'utr Klp61F FlyBase G25140.1 AACCCGTTTATGTTAGTGGATTTCGGATCGCTGTGTTTGTTTGGC 7 1241893 0.990597254 6 7 65 1 1.041392685 0.181818182 0.571428571 0.727272727 7 0 0 11 3L:1241886-1241930 6 4.5 1731 FBgn0004378 1433.893333 44.94333333 69.04666667 0.003138309 0.100126085 0.065173313 -3 -6 -4.5 0.15 dme-miR-282-5p 7mer-m8 AGAGGCT 3L 12474943 12474949 - 3L_12474943_12474949_- 0.425419216 0.512018796 0.468719006 0.061235164 CG10663 FBtr0346570|FBtr0113167 12474416|12474693 12475006|12475006 3L - 12474927 12474956 3'utr CG10663 FlyBase G36401.1 AAGTTGCAGAGGCTGTGAAAAACTAATTTA 14 12474953 0.718193932 3 9 58 0.625 1 0.0625 0.142857143 0.25 14 6 0 10 3L:12474927-12474956 7 CG10663 FBtr0113167|FBtr0346570 12474693|12474416 12475006|12475006 AGAGGCT 7mer-m8 dme-miR-282-5p 3L - 12474930 12474979 3'utr CG10663 FlyBase G27508.1 GTAGACATGGACTTGGGTCCGCTAAGTTGCAGAGGCTGTGAAAAACTAAT 19 12474953 0.82769006 4 14 72 0.80952381 0.929418926 0.238095238 0.105263158 0.19047619 19 3 1 17 3L:12474930-12474979 7 14 1732 FBgn0036287 1.21 0.05 0.08 11.57024793 280 175 4 4 4 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 12492038 12492043 - 3L_12492038_12492043_- 0.998473371 1 0.999236686 0.001079469 CG10657 FBtr0075975 12491828 12492142 3L - 12492026 12492067 3'utr CG10657 FlyBase G36406.1 AAGACGCGCGGGCATGCACACTTCGTACCTATTTAAAAGCAT 14 12492036 0.981318448 3 12 91 0.857142857 1.079181246 0.142857143 0 0 14 2 0 12 3L:12492026-12492067 6 CG10657 FBtr0075975 12491828 12492142 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L - 12491978 12492068 3'utr CG10657 FlyBase G27511.1 CAAGACGCGCGGGCATGCACACTTCGTACCTATTTAAAAGCATCACCACTAAGTTGTATAACTACGGTCTCGCGGGAACTGTGACTCCCTC 7 12492046 0.977150911 6 7 46 1 1.041392685 0.545454545 0.428571429 0.636363636 7 0 0 11 3L:12491978-12492068 6 9 1733 FBgn0036289 3.616666667 0.283333333 0.423333333 2.488479263 31.76470588 21.25984252 -7 3 -2 0.15 dme-miR-184-3p 8mer-A1 TCCGTCCA 3L 12498321 12498328 - 3L_12498321_12498328_- 0.393637099 0.599342526 0.496489812 0.145455683 CG10638 FBtr0345350 12498104 12498489 3L - 12498306 12498346 3'utr CG10638 FlyBase G36408.1 TTGATGTTCTCCATGAAATCCGTCCAGTTGCCAACGATCCG 8 12498319 0.787131608 2 8 52 1 1.079181246 0.083333333 0.25 0.5 8 0 0 12 3L:12498306-12498346 8 CG10638 FBtr0345350 12498104 12498489 TCCGTCCA 8mer-A1 dme-miR-184-3p 3L - 12498306 12498345 3'utr CG10638 FlyBase G27512.1 TGATGTTCTCCATGAAATCCGTCCAGTTGCCAACGATCCG 8 12498319 0.821608947 2 7 56 0.888888889 0.903089987 0.222222222 0.125 0.222222222 8 1 0 8 3L:12498306-12498345 8 7.5 1734 FBgn0036290 899.4033333 100.2333333 154.43 0.008338862 0.074825407 0.048565693 -9 -9 -9 0.15 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 1250109 1250115 + 3L_1250109_1250115_+ 0.823337477 0.823332453 0.823334965 3.54E-06 Sac1 FBtr0303217|FBtr0072652 1250068|1250068 1250451|1250451 3L + 1250076 1250142 3'utr Sac1 FlyBase G26994.1 TGTCGTCTAGCAGAGTCACTGGGAACTACCTCTGCAGCTAAACTGTCCCATTGCTCCGAGAAAGAAC 16 1250108 0.963364916 5 15 80 0.941176471 1.204119983 0.294117647 0.0625 0.117647059 16 1 0 16 3L:1250076-1250142 7 Sac1 FBtr0303217|FBtr0072652 1250068|1250068 1250451|1250451 GCAGCTA 7mer-A1 dme-miR-980-3p 3L + 1250077 1250153 3'utr Sac1 FlyBase G20435.1 GTCGTCTAGCAGAGTCACTGGGAACTACCTCTGCAGCTAAACTGTCCCATTGCTCCGAGAAAGAACAATTGTAAACC 13 1250107 0.969472889 6 12 71 0.944444444 1.230448921 0.166666667 0.307692308 0.5 13 1 0 17 3L:1250077-1250153 7 12 1735 FBgn0035195 492.1933333 25.24666667 38.54333333 0.024380663 0.475310272 0.311337888 1 2 1.5 0.15 dme-miR-988-3p 6mer3-8 ACAAGG 3L 12502559 12502564 + 3L_12502559_12502564_+ 0.97772306 0.999998298 0.988860679 0.015750945 CG10681 FBtr0075957|FBtr0332634 12502474|12502474 12502647|12502647 3L + 12502538 12502615 3'utr CG10681 FlyBase G29761.1 TTGTATAACCTGCTACTACATACAAGGACACAATTCGTTTAGTTAGATTTAAATGAAATATGCGTAATAATTTAAGAA 6 12502558 0.979081046 4 6 43 1 0.77815125 0 0 0 6 0 0 6 3L:12502538-12502615 6 CG10681 FBtr0332634|FBtr0075957 12502474|12502474 12502647|12502647 ACAAGG 6mer3-8 dme-miR-988-3p 3L + 12502539 12502571 3'utr CG10681 FlyBase G22530.1 TGTATAACCTGCTACTACATACAAGGACACAAT 8 12502557 0.936367957 4 7 30 0.9 0.954242509 0.1 0.25 0.4 8 1 0 9 3L:12502539-12502571 6 5.5 1736 FBgn0036291 74.39 9.18 14.21333333 0.073934669 0.59912854 0.3869606 1 2 1.5 0.15 dme-miR-970-3p 7mer-m8 TCTTATG 3L 12505366 12505372 + 3L_12505366_12505372_+ 0.657807533 0.658950072 0.658378802 0.00080794 vih FBtr0075958 12505147 12505821 3L + 12505323 12505382 3'utr vih FlyBase G29767.1 CGTTCAATGCTGATAGTTCATTTGGCAAAAGACCCCGTGCGTTTCTTATGTAATTGTCGA 6 12505364 0.98410851 5 6 47 1 0.77815125 0.333333333 0 0 6 0 0 6 3L:12505323-12505382 7 vih FBtr0075958 12505147 12505821 TCTTATG 7mer-m8 dme-miR-970-3p 3L + 12505352 12505378 3'utr vih FlyBase G22535.1 AGACCCCGTGCGTTTCTTATGTAATTG 5 12505365 0.833956576 3 5 37 1 0.84509804 0.428571429 0.4 0.571428571 5 0 0 7 3L:12505352-12505378 7 4.5 1737 FBgn0264848 630.4033333 52.49 79.89666667 0.007138287 0.085730615 0.05632275 2 1 1.5 0.15 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 12505632 12505637 + 3L_12505632_12505637_+ 0.999999988 0.999999989 0.999999988 0 vih FBtr0075958 12505147 12505821 3L + 12505604 12505650 3'utr vih FlyBase G29770.1 AAGCGACTATGCTGCTGCGCCGGCCATTATGTGAATGTTAGCTAATT 25 12505631 0.691748466 7 25 173 1 1.491361694 0.193548387 0.2 0.35483871 25 0 0 31 3L:12505604-12505650 6 vih FBtr0075958 12505147 12505821 ATGTGA 6mer3-8 dme-miR-1003-3p 3L + 12505594 12505648 3'utr vih FlyBase G22537.1 GATGATTTTTAAGCGACTATGCTGCTGCGCCGGCCATTATGTGAATGTTAGCTAA 18 12505639 0.627681633 7 17 120 0.96969697 1.505149978 0 0.444444444 0.696969697 18 1 0 32 3L:12505594-12505648 6 17.5 1738 FBgn0264848 630.4033333 52.49 79.89666667 0.027760005 0.333396837 0.219032918 1 -7 -3 0.15 dme-miR-304-5p 7mer-m8 TGAGATT 3L 12508106 12508112 - 3L_12508106_12508112_- 0.618962863 0.612556814 0.615759838 0.004529797 sti FBtr0075970|FBtr0332643 12507996|12507996 12508356|12508356 3L - 12508091 12508129 3'utr sti FlyBase G36418.1 TATACACAAATAAAACTTGAGATTTTGATAAAAAAGGTA 16 12508113 0.809919574 4 15 104 1 1.278753601 0 0.1875 0.315789474 16 0 0 19 3L:12508091-12508129 7 sti FBtr0075970|FBtr0332643 12507996|12507996 12508356|12508356 TGAGATT 7mer-m8 dme-miR-304-5p 3L - 12508100 12508140 3'utr sti FlyBase G27519.1 ACTTTGTGCTGTATACACAAATAAAACTTGAGATTTTGATA 9 12508113 0.853816163 3 9 69 1 1.113943352 0 0.333333333 0.538461538 9 0 0 13 3L:12508100-12508140 7 11.5 1739 FBgn0002466 1895.133333 37.79 58.17333333 0.006068175 0.30431331 0.197685079 1 1 1 0.15 dme-miR-932-5p 7mer-A1 GAATTGA 3L 12519225 12519231 + 3L_12519225_12519231_+ 0.731659037 0.731659037 0.731659037 0 tral FBtr0332635|FBtr0332642|FBtr0332636|FBtr0332641|FBtr0332638|FBtr0332639|FBtr0332637|FBtr0332640|FBtr0075959 12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150 12520954|12519695|12519695|12519695|12519695|12519695|12520954|12519695|12519695 3L + 12519186 12519246 3'utr tral FlyBase G29788.1 ACACCAACCACAACCAACAAACCACAAATTGATAGATGCGAATTGAGAAGAGCGTAAAGTA 10 12519228 0.943966455 5 9 37 1 1.041392685 0.363636364 0.222222222 0.363636364 9 0 0 11 3L:12519186-12519246 7 tral FBtr0332639|FBtr0332637|FBtr0332640|FBtr0075959|FBtr0332635|FBtr0332636|FBtr0332642|FBtr0332641|FBtr0332638 12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150 12519695|12520954|12519695|12519695|12520954|12519695|12519695|12519695|12519695 GAATTGA 7mer-A1 dme-miR-932-5p 3L + 12519151 12519245 3'utr tral FlyBase G22544.1 GTGCCGCCCGGCCAGTGGAAAGCCACTTTAAATATACACCAACCACAACCAACAAACCACAAATTGATAGATGCGAATTGAGAAGAGCGTAAAGT 8 12519228 0.937618104 7 7 31 1 1.113943352 0.384615385 0.5 0.692307692 8 0 0 13 3L:12519151-12519245 7 6 1740 FBgn0041775 2554.613333 85.08333333 130.6233333 0.002348692 0.070519099 0.0459336 -3 -3 -3 0.15 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 12519509 12519514 + 3L_12519509_12519514_+ 0.897378585 0.804811033 0.851094809 0.065455178 tral FBtr0332635|FBtr0332642|FBtr0332636|FBtr0332641|FBtr0332638|FBtr0332639|FBtr0332637|FBtr0332640|FBtr0075959 12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150 12520954|12519695|12519695|12519695|12519695|12519695|12520954|12519695|12519695 3L + 12519463 12519526 3'utr tral FlyBase G29790.1 AGCGCTCTACGATTCGATTAATGATTAGCGACTAGCGCGAATGTGAATGTGAATGTGAACCGAA 24 12519509 0.966297742 10 22 121 0.925925926 1.096910013 0.444444444 0.125 0.222222222 24 1 1 25 3L:12519463-12519526 6 tral FBtr0332639|FBtr0332637|FBtr0332640|FBtr0075959|FBtr0332635|FBtr0332636|FBtr0332642|FBtr0332641|FBtr0332638 12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150 12519695|12520954|12519695|12519695|12520954|12519695|12519695|12519695|12519695 ATGTGA 6mer3-8 dme-miR-1003-3p 3L + 12519471 12519518 3'utr tral FlyBase G22547.1 ACGATTCGATTAATGATTAGCGACTAGCGCGAATGTGAATGTGAATGT 15 12519488 0.82186454 7 15 89 1 1.322219295 0.476190476 0.266666667 0.476190476 15 0 0 21 3L:12519471-12519518 6 14.5 1741 FBgn0041775 2554.613333 85.08333333 130.6233333 0.005676006 0.170421156 0.111006201 0 21 10.5 0.15 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 12519998 12520005 + 3L_12519998_12520005_+ 0.668727299 0.668731575 0.668729437 3.04E-06 tral FBtr0332635|FBtr0332637 12519150|12519150 12520954|12520954 3L + 12519982 12520021 3'utr tral FlyBase G29795.1 AAAAGAAAATAAAATCGGCAGCTACGCGCTTCTATCAAAA 104 12519996 0.895315589 5 91 412 0.872 1.560305243 0.072 0.153846154 0.296 104 14 2 109 3L:12519982-12520021 8 tral FBtr0332637|FBtr0332635 12519150|12519150 12520954|12520954 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L + 12519981 12520026 3'utr tral FlyBase G22550.1 AAAAAGAAAATAAAATCGGCAGCTACGCGCTTCTATCAAAAGCACA 67 12519996 0.857844646 5 63 246 0.978947368 1.968482949 0.178947368 0.313432836 0.515789474 67 2 0 93 3L:12519981-12520026 8 84.5 1742 FBgn0041775 2554.613333 85.08333333 130.6233333 0.033077413 0.993143976 0.646898206 2 2 2 0.15 dme-bantam-3p 7mer-m8 TGATCTC 3L 12520197 12520203 + 3L_12520197_12520203_+ 0.661596162 0.66161416 0.661605161 1.27E-05 tral FBtr0332635|FBtr0332637 12519150|12519150 12520954|12520954 3L + 12520159 12520222 3'utr tral FlyBase G29796.1 AAGCCCAAATTTTCGGTTTTCGTACAGTTTATTTTCTCTGATCTCGGTTGGGCAAGGGAAATTA 88 12520197 0.99033327 8 82 827 0.922330097 1.67669361 0.27184466 0.125 0.252427184 88 7 1 95 3L:12520159-12520222 7 tral FBtr0332637|FBtr0332635 12519150|12519150 12520954|12520954 TGATCTC 7mer-m8 dme-bantam-3p 3L + 12520172 12520231 3'utr tral FlyBase G22551.1 CGGTTTTCGTACAGTTTATTTTCTCTGATCTCGGTTGGGCAAGGGAAATTATACTTACGA 50 12520197 0.978167442 8 46 513 0.898734177 1.550228353 0.443037975 0.42 0.632911392 50 7 1 71 3L:12520172-12520231 7 68 1743 FBgn0041775 2554.613333 85.08333333 130.6233333 0.02661851 0.799216454 0.520580805 0 0 0 0.15 dme-miR-2a-2-5p 6mer3-8 TGATGA 3L 12520266 12520271 + 3L_12520266_12520271_+ 0.998406675 0.990789873 0.994598274 0.005385891 tral FBtr0332635|FBtr0332637 12519150|12519150 12520954|12520954 3L + 12520243 12520329 3'utr tral FlyBase G29797.1 TTGAAAAGATACGATACCTATGGTGATGATGTTCTCAATGTAAATGTTAAGATTGATTGTGTGATTCACTGGCTGCTGCGCTTGAAA 41 12520271 0.737726945 12 36 333 0.894736842 1.707570176 0.333333333 0.341463415 0.526315789 41 6 0 51 3L:12520243-12520329 6 tral FBtr0332637|FBtr0332635 12519150|12519150 12520954|12520954 TGATGA 6mer3-8 dme-miR-2a-2-5p 3L + 12520247 12520327 3'utr tral FlyBase G22552.1 AAAGATACGATACCTATGGTGATGATGTTCTCAATGTAAATGTTAAGATTGATTGTGTGATTCACTGGCTGCTGCGCTTGA 45 12520270 0.721657385 13 40 387 0.87654321 1.152288344 0.37037037 0.444444444 0.691358025 45 6 4 71 3L:12520247-12520327 6 30 1744 FBgn0041775 2554.613333 85.08333333 130.6233333 0.01174346 0.352595495 0.229668002 -5 -4 -4.5 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 12527471 12527477 - 3L_12527471_12527477_- 0.661596196 0.661557451 0.661576824 2.74E-05 nst FBtr0075967 12527213 12527630 3L - 12527448 12527501 3'utr nst FlyBase G36463.1 ATTCTGCAAATGTTCACTGTCTTTTGTGTTCTAAAGATGACATATTTTTTGCCA 25 12527478 0.659621256 8 25 263 1 1.431363764 0.074074074 0.08 0.148148148 25 0 0 27 3L:12527448-12527501 7 nst FBtr0075967 12527213 12527630 TGTGTTC 7mer-m8 dme-miR-317-3p 3L - 12527434 12527632 stop_codon nst FlyBase G27549.1 AGAGCGGAATGACGAACTAACCTCTCACGGGAATCGACAATTGACACAGATCCTGGATGGAGCAATAAATCTCTTTACTCTAAGGTGCTCAATAACTTAAAAAAAAAACAACTTAACTCTCAAACGCATTTATTCTGCAAATGTTCACTGTCTTTTGTGTTCTAAAGATGACATATTTTTTGCCATTATTTATAAAGTT 42 12527478 0.985356046 20 39 326 0.967213115 1.770852012 0.196721311 0.30952381 0.524590164 42 2 0 59 3L:12527434-12527632 7 19 1745 FBgn0036298 243.65 13.55666667 20.85333333 0.07798071 1.401524465 0.91112532 1 1 1 0.15 dme-miR-184-3p 7mer-m8 TCCGTCC 3L 12530631 12530637 - 3L_12530631_12530637_- 0.658899594 0.658810582 0.658855088 6.29E-05 Tsf2 FBtr0075966 12530434 12530747 3L - 12530554 12530742 3'utr Tsf2 FlyBase G36473.2 TAGACTCACTTAGATTTCAGAATTCTACAAGCATCTCTAGCACAAAGAGAAAACATATCAACATTTTTACATTCCAAATATGATTAAGTTAAATGTGAAATCCCTTCCGTCCGAAAATGAAACTCTAACTAGCCGAAAAATATCTGTTGAAGGCTATAGTTTATAATTTATAAAGTCCTGTGCCTTATT 1471 12530638 0.902688607 34 1430 6990 0.982896847 2.565611725 0.631747728 0.205982325 0.375734901 1471 28 4 1839 3L:12530554-12530742 7 Tsf2 FBtr0075966 12530434 12530747 TCCGTCC 7mer-m8 dme-miR-184-3p 3L - 12530609 12530744 3'utr Tsf2 FlyBase G27552.3 ACTAGACTCACTTAGATTTCAGAATTCTACAAGCATCTCTAGCACAAAGAGAAAACATATCAACATTTTTACATTCCAAATATGATTAAGTTAAATGTGAAATCCCTTCCGTCCGAAAATGAAACTCTAACTAGCC 1090 12530638 0.936300892 17 1075 4916 0.981976383 2.420505837 0.617153511 0.351376147 0.560596644 1090 24 5 1580 3L:12530609-12530744 7 1192 1746 FBgn0036299 169.6666667 7.166666667 11.03333333 7.025540275 166.3255814 108.0362538 1 1 1 0.15 dme-miR-8-3p 6mer2-7 AGTATT 3L 12537736 12537741 - 3L_12537736_12537741_- 0.944149083 0.999999989 0.972074536 0.03949255 sowah FBtr0300889|FBtr0300888|FBtr0300887 12537511|12537511|12537511 12537814|12537814|12538184 3L - 12537724 12537762 3'utr sowah FlyBase G36484.1 CATTGACCATGGAATCGTGAAAGTATTTGTTTTTCAATT 9 12537735 0.804740307 5 9 76 1 1 0.5 0.111111111 0.2 9 0 0 10 3L:12537724-12537762 6 sowah FBtr0300887|FBtr0300888|FBtr0300889 12537511|12537511|12537511 12538184|12537814|12537814 AGTATT 6mer2-7 dme-miR-8-3p 3L - 12537728 12537759 3'utr sowah FlyBase G27558.1 TGACCATGGAATCGTGAAAGTATTTGTTTTTC 7 12537745 0.738529573 4 7 59 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 3L:12537728-12537759 6 8 1747 FBgn0036302 1488.053333 89.81666667 136.7766667 0.005376151 0.089070328 0.058489508 -6 4 -1 0.15 dme-miR-305-3p 6mer3-8 ATGTGC 3L 12741059 12741064 + 3L_12741059_12741064_+ 0.848342875 0.98402482 0.916183847 0.095941592 Ptp69D FBtr0075914|FBtr0075913 12740996|12740996 12741568|12741568 3L + 12741013 12741082 3'utr Ptp69D FlyBase G29832.1 ACTTATACGAGTACAGAATGCACGTGTTGGAACATCAATGCATCAAATGTGCTATGATAAATTATTTGTA 63 12741060 0.824824042 10 61 449 0.971014493 1.348953548 0.072463768 0.095238095 0.173913043 63 0 2 67 3L:12741013-12741082 6 Ptp69D FBtr0075914|FBtr0075913 12740996|12740996 12741568|12741568 ATGTGC 6mer3-8 dme-miR-305-3p 3L + 12741015 12741083 3'utr Ptp69D FlyBase G22575.1 TTATACGAGTACAGAATGCACGTGTTGGAACATCAATGCATCAAATGTGCTATGATAAATTATTTGTAT 34 12741060 0.985104445 7 32 260 0.964285714 1.73239376 0.214285714 0.441176471 0.660714286 34 2 0 54 3L:12741015-12741083 6 41 1748 FBgn0014007 2746.713333 63.97333333 98.05 0.014926931 0.640892038 0.418154003 -1 -1 -1 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 3L 12741211 12741217 + 3L_12741211_12741217_+ 0.66746279 0.667053812 0.667258301 0.000289207 Ptp69D FBtr0075914|FBtr0075913 12740996|12740996 12741568|12741568 3L + 12741178 12741237 3'utr Ptp69D FlyBase G29833.1 AATGTAGTGTATACGTATCGTATTGATAAAACTACCAAAGGAAAATAAGTAACATATTTT 78 12741210 0.966222122 5 77 212 0.978494624 1.959041392 0.010752688 0.153846154 0.290322581 78 2 0 91 3L:12741178-12741237 7 Ptp69D FBtr0075914|FBtr0075913 12740996|12740996 12741568|12741568 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 12741193 12741224 3'utr Ptp69D FlyBase G22576.1 TATCGTATTGATAAAACTACCAAAGGAAAATA 53 12741210 0.954896332 3 51 117 0.95890411 1.367976785 0.01369863 0.339622642 0.520547945 53 1 2 70 3L:12741193-12741224 7 64.5 1749 FBgn0014007 2746.713333 63.97333333 98.05 0.023482611 1.008232597 0.657827639 1 1 1 0.15 dme-miR-305-3p 6mer3-8 ATGTGC 3L 12746555 12746560 + 3L_12746555_12746560_+ 1 0.999999998 0.999999999 0 CG32109 FBtr0075918 12746477 12746770 3L + 12746525 12746582 3'utr CG32109 FlyBase G29838.1 AATAATAAATGTTAAGCTGATTCCACTGTAATGTGCTATATCTGGTCCGTATTTTTGG 24 12746557 0.997597545 8 11 234 0.53125 0.929418926 0.09375 0.25 0.4375 24 14 1 17 3L:12746525-12746582 6 CG32109 FBtr0075918 12746477 12746770 ATGTGC 6mer3-8 dme-miR-305-3p 3L + 12746534 12746574 3'utr CG32109 FlyBase G22580.1 TGTTAAGCTGATTCCACTGTAATGTGCTATATCTGGTCCGT 14 12746556 0.998342382 5 6 133 0.3 0.954242509 0 0.714285714 0.866666667 14 21 0 9 3L:12746534-12746574 6 16.5 1750 FBgn0052109 192.0866667 22.89 35.27333333 0.085898726 0.720838794 0.467775468 -2 -1 -1.5 0.15 dme-miR-305-3p 6mer3-8 ATGTGC 3L 12784674 12784679 - 3L_12784674_12784679_- 0.963339981 0.993106284 0.978223132 0.021047953 Atg1 FBtr0075945 12784427 12785336 3L - 12784649 12784736 3'utr Atg1 FlyBase G36532.1 TTATATTATAAACATACCATACAATATTGATGGCTGCACTACACAAACATGTTTACAATGTGCTATGTTCATAGTTTTTAGTTAGGTC 40 12784704 0.786161801 15 37 296 0.955555556 1.633468456 0.177777778 0.05 0.155555556 40 2 0 43 3L:12784649-12784736 6 Atg1 FBtr0075945 12784427 12785336 ATGTGC 6mer3-8 dme-miR-305-3p 3L - 12784643 12784737 3'utr Atg1 FlyBase G27592.1 ATTATATTATAAACATACCATACAATATTGATGGCTGCACTACACAAACATGTTTACAATGTGCTATGTTCATAGTTTTTAGTTAGGTCTTTTCT 25 12784678 0.895281766 6 23 198 0.96969697 1.505149978 0.151515152 0.24 0.424242424 25 1 0 32 3L:12784643-12784737 6 10.5 1751 FBgn0260945 853.22 25.63333333 39.42333333 0.012306322 0.409622887 0.266339731 25 -1 12 0.15 dme-miR-304-5p 8mer-A1 TGAGATTA 3L 12824572 12824579 + 3L_12824572_12824579_+ 0.62535838 0.625362587 0.625360483 2.97E-06 CG42588 FBtr0304053|FBtr0301717 12824517|12824517 12824650|12824650 3L + 12824528 12824588 3'utr CG42588 FlyBase G29883.1 TGGAAACACACTGGTAACAGAAAATCTTCTGAACAAGCACCATCTGAGATTATAACTTATT 14 12824570 0.976945955 5 12 75 0.894736842 1.230448921 0 0.214285714 0.421052632 14 2 0 17 3L:12824528-12824588 8 CG42588 FBtr0301717|FBtr0304053 12824517|12824517 12824650|12824650 TGAGATTA 8mer-A1 dme-miR-304-5p 3L + 12824537 12824590 3'utr CG42588 FlyBase G22612.1 ACTGGTAACAGAAAATCTTCTGAACAAGCACCATCTGAGATTATAACTTATTGT 13 12824571 0.9810472 6 12 77 0.941176471 1.204119983 0 0.230769231 0.411764706 13 1 0 16 3L:12824537-12824590 8 10.5 1752 FBgn0260965 649.5 9.203333333 14.18 0.016166282 1.140890982 0.740479549 2 1 1.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 12852253 12852258 + 3L_12852253_12852258_+ 0.988445855 0.987442406 0.98794413 0.000709582 Wbp2 FBtr0273240|FBtr0273241|FBtr0332047 12852235|12852235|12852235 12853169|12853169|12853169 3L + 12852232 12852276 stop_codon Wbp2 FlyBase G29892.1 TGTAATTAAAAGCAAACTACTGTACCTCAAATAGCCATCCCGACA 37 12852252 0.654453339 4 37 153 1 1.662757832 0.152173913 0.189189189 0.347826087 37 0 0 46 3L:12852232-12852276 6 Wbp2 FBtr0332047|FBtr0273240|FBtr0273241 12852235|12852235|12852235 12853169|12853169|12853169 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 12852235 12852276 stop_codon Wbp2 FlyBase G22617.1 AATTAAAAGCAAACTACTGTACCTCAAATAGCCATCCCGACA 32 12852252 0.920082361 5 32 131 1 1.72427587 0.150943396 0.5 0.698113208 32 0 0 53 3L:12852235-12852276 6 34.5 1753 FBgn0036318 1204.006667 91.87 139.8366667 0.028654326 0.375530641 0.246716407 1 1 1 0.15 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 12894546 12894553 + 3L_12894546_12894553_+ 0.643235767 0.643542412 0.643389089 0.000216799 CG14118 FBtr0075870 12894495 12894758 3L + 12894528 12894564 3'utr CG14118 FlyBase G29896.1 TTTTAAGTGAGTGCAATAAAGACTGAGTGAGTTGTGT 18 12894544 0.872400093 3 17 87 0.947368421 1.255272505 0.736842105 0.055555556 0.105263158 18 1 0 18 3L:12894528-12894564 8 CG14118 FBtr0075870 12894495 12894758 AAGACTGA 8mer-A1 dme-miR-14-3p 3L + 12894529 12894566 3'utr CG14118 FlyBase G22619.1 TTTAAGTGAGTGCAATAAAGACTGAGTGAGTTGTGTGA 14 12894544 0.879132243 2 14 71 1 1.278753601 0.631578947 0.285714286 0.473684211 14 0 0 19 3L:12894529-12894566 8 16 1754 FBgn0036323 1 0.083333333 0.13 16 192 123.0769231 2 2 2 0.15 dme-miR-304-5p 8mer-A1 TGAGATTA 3L 1299857 1299864 + 3L_1299857_1299864_+ 0.621362511 0.622107724 0.621735117 0.000526936 scf FBtr0089941|FBtr0089942 1299832|1299832 1300389|1300389 3L + 1299831 1299963 stop_codon scf FlyBase G27015.1 TAGAGTGTCTAGATACCCAGAATCCCTGAGATTAAGATTGATCCTATGAATCTCCCACTTCGCATGCCAAATAACTTGTAATCTTGTCTAGCCCTTAAGACCTTAAGAAAGTGCATTATAAACCGACTCGAAT 587 1299862 0.890049899 29 559 3878 0.949712644 1.820201459 0.096264368 0.160136286 0.291666667 587 26 9 661 3L:1299831-1299963 8 scf FBtr0089941|FBtr0089942 1299832|1299832 1300389|1300389 TGAGATTA 8mer-A1 dme-miR-304-5p 3L + 1299711 1299961 stop_codon scf FlyBase G20453.1 GAGGCCGATGCGGACCACGATGATAAGTTGACAAAGGAGGAAATACTAGACAAGTACGACGTTTTCGTCGGCTCCCAGGCCACCGATTTCGGCGAGGCCTTGGCCCGCCACGATGAGTTCTAGAGTGTCTAGATACCCAGAATCCCTGAGATTAAGATTGATCCTATGAATCTCCCACTTCGCATGCCAAATAACTTGTAATCTTGTCTAGCCCTTAAGACCTTAAGAAAGTGCATTATAAACCGACTCGA 386 1299862 0.979498298 39 361 2483 0.942857143 1.845872874 0.090756303 0.383419689 0.6 386 27 7 561 3L:1299711-1299961 8 269.5 1755 FBgn0025682 1802 152.5933333 234.48 0.149556049 1.766132203 1.149351757 -5 -5 -5 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3L 1300222 1300228 + 3L_1300222_1300228_+ 0.808041953 0.806783482 0.807412718 0.000889894 scf FBtr0089941|FBtr0089942 1299832|1299832 1300389|1300389 3L + 1300135 1300233 3'utr scf FlyBase G27017.2 AGATACGCCGCCTTTGCCTGTGTAACATATGTATAAACATAAATGATTTTCGCTGTAGCCCGATTTATTTCCAGCTGCGAGAACATTCCAAAGAGAGTG 68 1300220 0.841920804 12 65 265 0.964705882 1.311753861 0.411764706 0.176470588 0.341176471 68 0 3 82 3L:1300135-1300233 7 scf FBtr0089941|FBtr0089942 1299832|1299832 1300389|1300389 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 1300182 1300233 3'utr scf FlyBase G20454.2 TTTCGCTGTAGCCCGATTTATTTCCAGCTGCGAGAACATTCCAAAGAGAGTG 28 1300220 0.809028302 5 27 85 1 1.643452676 0.386363636 0.535714286 0.704545455 28 0 0 44 3L:1300182-1300233 7 34 1756 FBgn0025682 1802 152.5933333 234.48 0.018867925 0.222814452 0.145001706 2 2 2 0.15 dme-miR-14-3p 7mer-A1 AGACTGA 3L 13009226 13009232 + 3L_13009226_13009232_+ 0.822867099 0.822466244 0.822666672 0.000283479 CG14117 FBtr0306091|FBtr0332074 13009186|13008969 13009450|13009450 3L + 13009209 13009249 3'utr CG14117 FlyBase G29898.1 AATAACCCCAGATTTCGAGACTGATGGCTCAGAACGGATAT 36 13009223 0.616156631 5 36 185 1 1.591064607 0.102564103 0.055555556 0.128205128 36 0 0 39 3L:13009209-13009249 7 CG14117 FBtr0332074|FBtr0306091 13008969|13009186 13009450|13009450 AGACTGA 7mer-A1 dme-miR-14-3p 3L + 13009209 13009290 3'utr CG14117 FlyBase G22622.1 AATAACCCCAGATTTCGAGACTGATGGCTCAGAACGGATATGCGTCAAATTAAACGAGGATGTAGCCTTTAGCTATTTAGTT 38 13009233 0.905760003 8 38 207 1 1.77815125 0.183333333 0.342105263 0.583333333 38 0 0 60 3L:13009209-13009290 7 32 1757 FBgn0036331 82 9.843333333 15.15333333 0.390243902 3.250931256 2.11174659 3 -7 -2 0.15 dme-miR-282-5p 6mer2-7 GAGGCT 3L 13020073 13020078 - 3L_13020073_13020078_- 0.806757777 0.876608629 0.841683203 0.049391974 AdenoK FBtr0075895|FBtr0075896|FBtr0346531 13019980|13019980|13019713 13020289|13020289|13020289 3L - 13020034 13020097 3'utr AdenoK FlyBase G36605.1 ATGAACAAATAGAGAGAGTGAGGCTTGTGTCTTATAGATAGAGCAATATTCGAATTTAAATTGA 83 13020079 0.974881337 5 81 503 0.97752809 1.939519253 0.146067416 0.072289157 0.134831461 83 2 0 87 3L:13020034-13020097 6 AdenoK FBtr0075896|FBtr0346531|FBtr0075895 13019980|13019713|13019980 13020289|13020289|13020289 GAGGCT 6mer2-7 dme-miR-282-5p 3L - 13020035 13020101 3'utr AdenoK FlyBase G27639.1 TGACATGAACAAATAGAGAGAGTGAGGCTTGTGTCTTATAGATAGAGCAATATTCGAATTTAAATTG 41 13020079 0.975020172 6 40 251 0.983333333 1.770852012 0.183333333 0.317073171 0.533333333 41 1 0 59 3L:13020035-13020101 6 60 1758 FBgn0036337 473.9933333 36.92 56.63666667 0.126584059 1.625135428 1.05938438 1 1 1 0.15 dme-miR-999-3p 7mer-A1 GTTAACA 3L 13020168 13020174 - 3L_13020168_13020174_- 0.823289555 0.823255132 0.823272343 2.44E-05 AdenoK FBtr0075895|FBtr0075896|FBtr0346531 13019980|13019980|13019713 13020289|13020289|13020289 3L - 13020160 13020202 3'utr AdenoK FlyBase G36606.1 AAGTAAATGAGAGTGACTAAAAGATTTTGTTAACACTGATAAT 27 13020175 0.662619382 6 26 215 0.971428571 1.531478917 0.257142857 0.222222222 0.4 27 1 0 34 3L:13020160-13020202 7 AdenoK FBtr0075896|FBtr0346531|FBtr0075895 13019980|13019713|13019980 13020289|13020289|13020289 GTTAACA 7mer-A1 dme-miR-999-3p 3L - 13020164 13020231 3'utr AdenoK FlyBase G27640.1 AAGCGCAGCAAGATTTGCAATTGTTAATTAAGTAAATGAGAGTGACTAAAAGATTTTGTTAACACTGA 19 13020175 0.983059798 6 18 153 0.941176471 1.505149978 0.117647059 0.631578947 0.794117647 19 2 0 32 3L:13020164-13020231 7 20 1759 FBgn0036337 473.9933333 36.92 56.63666667 0.042194686 0.541711809 0.353128127 1 1 1 0.15 dme-miR-980-3p 6mer2-7 GCAGCT 3L 1311764 1311769 - 3L_1311764_1311769_- 0.999659889 0.999804016 0.999731953 0.000101894 CG9186 FBtr0072728|FBtr0072727 1311717|1311717 1311929|1311929 3L - 1311720 1311900 3'utr CG9186 FlyBase G33267.1 AGCCCTGTCCATTACCTAATCCATCCATGCCAATAGACTTGGGAATCCGGATTACGGTTGAACAGCAAACCAATAGCAATTACTCCACTGCCTTTGTGTGGCAATTAGTTCGTTTTTATTAGTATCTTTTTGCAGCTCTCGAAGACAACTCTAAATATAGTCAAAAGTGATTTAACACGGT 78 1311771 0.883379304 21 78 564 1 2.037426498 0.036697248 0.307692308 0.504587156 78 0 0 109 3L:1311720-1311900 6 CG9186 FBtr0072728|FBtr0072727 1311717|1311717 1311929|1311929 GCAGCT 6mer2-7 dme-miR-980-3p 3L - 1311723 1311794 3'utr CG9186 FlyBase G25170.1 AGTTCGTTTTTATTAGTATCTTTTTGCAGCTCTCGAAGACAACTCTAAATATAGTCAAAAGTGATTTAACAC 26 1311771 0.789320498 5 26 207 1 1.591064607 0.051282051 0.384615385 0.58974359 26 0 0 39 3L:1311723-1311794 6 22 1760 FBgn0035206 326.0766667 28.00666667 42.93333333 0.067468796 0.785527255 0.51242236 2 2 2 0.15 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3L 1318252 1318257 + 3L_1318252_1318257_+ 0.507738532 0.999373078 0.753555805 0.34763816 CG9153 FBtr0310555|FBtr0072671|FBtr0072670 1318000|1318000|1318000 1318330|1318330|1318330 3L + 1318160 1318278 3'utr CG9153 FlyBase G27049.1 AGTACAATGTCGTGTTATAGCTTTAAACTCTAGACTAGTTATTAATATCGCATTGTTATGGAGAGAAAGGAATTCAAGGAGGTAAATAAGGTTGGTGCATCAGTCTGAGGACAACAACA 91 1318259 0.823387251 18 77 567 0.85046729 1.959041392 0.196261682 0.164835165 0.289719626 91 16 0 91 3L:1318160-1318278 6 CG9153 FBtr0072670|FBtr0310555|FBtr0072671 1318000|1318000|1318000 1318330|1318330|1318330 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3L + 1318152 1318278 3'utr CG9153 FlyBase G20475.1 AATCAGCAAGTACAATGTCGTGTTATAGCTTTAAACTCTAGACTAGTTATTAATATCGCATTGTTATGGAGAGAAAGGAATTCAAGGAGGTAAATAAGGTTGGTGCATCAGTCTGAGGACAACAACA 51 1318258 0.975664576 16 46 295 0.891566265 1.86923172 0.168674699 0.490196078 0.686746988 51 9 0 74 3L:1318152-1318278 6 43 1761 FBgn0035207 1089.59 34.05 51.71333333 0.039464386 1.262848752 0.831507026 -7 -6 -6.5 0.15 dme-miR-988-3p 7mer-m8 ACAAGGG 3L 13278114 13278120 + 3L_13278114_13278120_+ 0.638162722 0.381487202 0.509824962 0.181496987 caps FBtr0075832|FBtr0075833|FBtr0305480 13277310|13277310|13278030 13279642|13279642|13279642 3L + 13278090 13278163 stop_codon caps FlyBase G29944.1 CGGATATCGAGCTGCATTACTTCTACAAGGGTTAAAGAGGAAACTTGAAAAGCAAGGGAATCGATCTAATTTAA 21 13278121 0.93786401 8 18 105 0.888888889 1.380211242 0.148148148 0.285714286 0.444444444 21 3 0 24 3L:13278090-13278163 7 caps FBtr0075832|FBtr0075833|FBtr0305480 13277310|13277310|13278030 13279642|13279642|13279642 ACAAGGG 7mer-m8 dme-miR-988-3p 3L + 13278097 13278162 stop_codon caps FlyBase G22664.1 CGAGCTGCATTACTTCTACAAGGGTTAAAGAGGAAACTTGAAAAGCAAGGGAATCGATCTAATTTA 12 13278135 0.962094551 4 9 49 0.722222222 1.113943352 0.055555556 0.5 0.666666667 12 5 0 13 3L:13278097-13278162 7 9 1762 FBgn0023095 209.6666667 5.27 8.083333333 0.042925278 1.707779886 1.113402062 -7 -21 -14 0.15 dme-bantam-3p 6mer3-8 TGATCT 3L 13278505 13278510 + 3L_13278505_13278510_+ 0.999997991 0.999989474 0.999993733 6.01E-06 caps FBtr0075832|FBtr0075833|FBtr0305480|FBtr0346864 13277310|13277310|13278030|13278123 13279642|13279642|13279642|13279642 3L + 13278465 13278553 3'utr caps FlyBase G29946.1 ATTGACCATCCTGCTGATCGGCCATTTAATTTGCATACAGTGATCTTAATATTTAGGTTATGCTTAAAAGCAGTTCAATTATTGTAAAT 106 13278510 0.991625236 15 92 1002 0.893129771 1.46612587 0.022900763 0.20754717 0.358778626 106 11 3 117 3L:13278465-13278553 6 caps FBtr0075832|FBtr0075833|FBtr0305480|FBtr0346864 13277310|13277310|13278030|13278123 13279642|13279642|13279642|13279642 TGATCT 6mer3-8 dme-bantam-3p 3L + 13278465 13278529 3'utr caps FlyBase G22666.1 ATTGACCATCCTGCTGATCGGCCATTTAATTTGCATACAGTGATCTTAATATTTAGGTTATGCTT 59 13278509 0.69590373 11 53 502 0.896551724 1.591064607 0.034482759 0.322033898 0.540229885 59 8 1 78 3L:13278465-13278529 6 72 1763 FBgn0023095 209.6666667 5.27 8.083333333 0.343402226 13.66223909 8.907216495 -5 -4 -4.5 0.15 dme-bantam-3p 6mer2-7 GATCTC 3L 1333330 1333335 - 3L_1333330_1333335_- 0.999780131 0.884732127 0.942256129 0.081351221 CG2211 FBtr0331866|FBtr0072723 1333237|1333237 1333416|1333416 3L - 1333287 1333388 3'utr CG2211 FlyBase G33271.1 ATTCAAACAGCCATGTTAGTCCAAACTTTCATATGGTATAAACTCCCTATTAAGATCTCGTTAAAACCACTGAAGACTTGAAATACGTGTAGTGCACTCTAA 77 1333328 0.968417021 14 69 557 0.902173913 1.220108088 0.141304348 0.155844156 0.293478261 77 5 4 83 3L:1333287-1333388 6 CG2211 FBtr0331866|FBtr0072723 1333237|1333237 1333416|1333416 GATCTC 6mer2-7 dme-bantam-3p 3L - 1333294 1333365 3'utr CG2211 FlyBase G25174.2 AACTTTCATATGGTATAAACTCCCTATTAAGATCTCGTTAAAACCACTGAAGACTTGAAATACGTGTAGTGC 62 1333328 0.924516305 11 62 379 1 1.954242509 0.055555556 0.322580645 0.533333333 62 0 0 90 3L:1333294-1333365 6 53 1764 FBgn0035211 37.72 2.756666667 4.2 1.405090138 19.2261185 12.61904762 -7 -7 -7 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 13386376 13386381 - 3L_13386376_13386381_- 0.995513233 0.999998924 0.997756079 0.003171869 CG10171 FBtr0075865|FBtr0075865|FBtr0075865|FBtr0075864|FBtr0075864|FBtr0075864 13385944|13385944|13385944|13386092|13386092|13386092 13386714|13386714|13386714|13386714|13386714|13386714 3L - 13386349 13386396 3'utr CG10171 FlyBase G36613.1 ATGACGTTGTTGTTACTGTGACTGTTCACCTCCATTTTGTGTATTAAC 16 13386372 0.98502915 6 16 130 1 1.301029996 0.5 0.1875 0.35 16 0 0 20 3L:13386349-13386396 6 CG10171 FBtr0075864|FBtr0075864|FBtr0075864|FBtr0075865|FBtr0075865|FBtr0075865 13386092|13386092|13386092|13385944|13385944|13385944 13386714|13386714|13386714|13386714|13386714|13386714 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 13386360 13386402 3'utr CG10171 FlyBase G27645.1 CGGATTATGACGTTGTTGTTACTGTGACTGTTCACCTCCATTT 17 13386373 0.700992705 6 16 151 1 1.447158031 0.428571429 0.411764706 0.642857143 17 0 0 28 3L:13386360-13386402 6 15 1765 FBgn0036353 70.39 4.823333333 7.333333333 0.213098451 3.109882516 2.045454545 -9 -8 -8.5 0.15 dme-miR-79-3p 6mer3-8 TAGCTT 3L 1339523 1339528 - 3L_1339523_1339528_- 0.929882243 0.92992613 0.929904186 3.10E-05 CG2199 FBtr0331865|FBtr0072722|FBtr0072721 1339458|1339458|1339458 1339821|1339821|1339821 3L - 1339468 1339598 3'utr CG2199 FlyBase G33274.1 AATTTGTATATTAAGACTTTATTATAACCGCATTGGTTACACCACTTGTACTCACCAAGAGTATATAAATTAGCTTGAATGTAATAAACATATTTGTACTGAGCGATGAACTGTTAATAAAAAATGGCAAA 72 1339529 0.78691201 14 71 509 1 1.973127854 0.106382979 0.180555556 0.372340426 72 0 0 94 3L:1339468-1339598 6 CG2199 FBtr0072721|FBtr0331865|FBtr0072722 1339458|1339458|1339458 1339821|1339821|1339821 TAGCTT 6mer3-8 dme-miR-79-3p 3L - 1339469 1339563 3'utr CG2199 FlyBase G25178.1 GTTACACCACTTGTACTCACCAAGAGTATATAAATTAGCTTGAATGTAATAAACATATTTGTACTGAGCGATGAACTGTTAATAAAAAATGGCAA 51 1339529 0.881639837 9 50 342 0.986666667 1.86923172 0.133333333 0.352941176 0.56 51 1 0 74 3L:1339469-1339563 6 39 1766 FBgn0035213 1503.256667 70.66666667 108.9133333 0.025943673 0.551886792 0.358082879 1 1 1 0.15 dme-miR-14-3p 7mer-A1 AGACTGA 3L 1343903 1343909 - 3L_1343903_1343909_- 0.821463676 0.817136944 0.81930031 0.00305951 Ptp61F FBtr0072719|FBtr0310161 1342717|1342717 1344327|1344327 3L - 1343886 1343951 3'utr Ptp61F FlyBase G33294.1 AAAATCGGGTAGAAATCACGTCAAATGTAGATTTTGCGCAATAGACTGACATTTTAGATCAAATTT 59 1343910 0.982685905 9 58 433 0.986486486 1.562292864 0.135135135 0.203389831 0.364864865 59 0 1 73 3L:1343886-1343951 7 Ptp61F FBtr0310161|FBtr0072719 1342717|1342717 1344327|1344327 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 1343886 1343929 3'utr Ptp61F FlyBase G25190.1 AAATGTAGATTTTGCGCAATAGACTGACATTTTAGATCAAATTT 34 1343910 0.923139298 3 31 223 0.88 1.342422681 0.22 0.323529412 0.54 34 5 1 44 3L:1343886-1343929 7 45.5 1767 FBgn0267487 1392.83 58.80666667 89.87333333 0.032667303 0.7737218 0.506268081 1 1 1 0.15 dme-miR-1007-3p 6mer3-8 TGAGCT 3L 1344063 1344068 - 3L_1344063_1344068_- 0.958905354 0.930307096 0.944606225 0.020222052 Ptp61F FBtr0072719|FBtr0310161|FBtr0072718 1342717|1342717|1343981 1344327|1344327|1344327 3L - 1344034 1344092 3'utr Ptp61F FlyBase G33295.1 ACGAATTGCGGATGGCGGATTGATTGAGCTGAACGAACGATACAAGATGCATAAATATT 9 1344069 0.961517269 4 9 48 1 1.146128036 0.142857143 0.333333333 0.571428571 9 0 0 14 3L:1344034-1344092 6 Ptp61F FBtr0310161|FBtr0072718|FBtr0072719 1342717|1343981|1342717 1344327|1344327|1344327 TGAGCT 6mer3-8 dme-miR-1007-3p 3L - 1344030 1344081 3'utr Ptp61F FlyBase G25191.1 ATGGCGGATTGATTGAGCTGAACGAACGATACAAGATGCATAAATATTAGGG 6 1344069 0.961935594 4 5 26 0.857142857 0.77815125 0 0.166666667 0.285714286 6 1 0 6 3L:1344030-1344081 6 5.5 1768 FBgn0267487 1392.83 58.80666667 89.87333333 0.003948795 0.093526811 0.061197241 1 1 1 0.15 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 13483952 13483958 - 3L_13483952_13483958_- 0.512505828 0.585568585 0.549037206 0.051663201 Abp1 FBtr0075819 13483531 13484013 3L - 13483912 13483975 3'utr Abp1 FlyBase G36640.1 TAAATATCTACACCAATGCAGCTAGCAACTATATTTTGGATCCGGACTATAGCTACTTAAACAC 81 13483959 0.925631323 11 71 322 0.916666667 1.643452676 0.020833333 0.1875 0.322916667 80 7 1 88 3L:13483912-13483975 7 Abp1 FBtr0075819 13483531 13484013 GCAGCTA 7mer-A1 dme-miR-980-3p 3L - 13483936 13483990 3'utr Abp1 FlyBase G27663.2 GGGACGCCCTTTTGCTAAATATCTACACCAATGCAGCTAGCAACTATATTTTGGA 48 13483959 0.948217751 5 42 176 0.913580247 1.170261715 0.012345679 0.5 0.703703704 48 3 4 74 3L:13483936-13483990 7 53 1769 FBgn0036372 618.6666667 30.00333333 45.8 0.085668103 1.766470392 1.15720524 1 1 1 0.15 dme-miR-283-5p 8mer-A1 TGATATTA 3L 13509895 13509902 + 3L_13509895_13509902_+ 0.592189093 0.592126617 0.592157855 4.42E-05 Spt20 FBtr0340705|FBtr0304904|FBtr0075812 13509797|13508879|13509797 13510695|13510695|13511541 3L + 13509871 13509914 3'utr Spt20 FlyBase G30001.1 GAAGGCTACGCGTTGTGTATTGCTTGATATTATAGTTTATGGTT 8 13509894 0.98605216 4 8 95 1 1 0 0.25 0.4 8 0 0 10 3L:13509871-13509914 8 Spt20 FBtr0075812|FBtr0304904|FBtr0340705 13509797|13508879|13509797 13511541|13510695|13510695 TGATATTA 8mer-A1 dme-miR-283-5p 3L + 13509837 13509912 3'utr Spt20 FlyBase G22707.1 CGACTGAGAGATGAAGCTATAGAGCGAACAAGTAGAAGGCTACGCGTTGTGTATTGCTTGATATTATAGTTTATGG 16 13509893 0.942297423 6 12 110 0.761904762 0.903089987 0.380952381 0.3125 0.476190476 16 4 1 16 3L:13509837-13509912 8 8 1770 FBgn0036374 444.0733333 7.2 11.05666667 0.018015043 1.111111111 0.723545372 1 2 1.5 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT 3L 13510012 13510018 + 3L_13510012_13510018_+ 0.65426681 0.654683436 0.654475123 0.000294581 Spt20 FBtr0340705|FBtr0304904|FBtr0075812 13509797|13508879|13509797 13510695|13510695|13511541 3L + 13509944 13510036 3'utr Spt20 FlyBase G30002.1 TGTATACCCATATAACTATATATGTTTTGATGTGTAATCGTAAGTGTAAATTGCATGGGCAACAGCATGGCAGCTCATAGTTGTGCAACCTAG 292 13510011 0.982357188 8 289 1074 0.991689751 2.553883027 0.318559557 0.178082192 0.335180055 292 3 0 358 3L:13509944-13510036 7 Spt20 FBtr0075812|FBtr0304904|FBtr0340705 13509797|13508879|13509797 13511541|13510695|13510695 GGCAGCT 7mer-m8 dme-miR-980-3p 3L + 13509990 13510036 3'utr Spt20 FlyBase G22708.1 TAAATTGCATGGGCAACAGCATGGCAGCTCATAGTTGTGCAACCTAG 185 13510011 0.973260255 5 181 622 0.982758621 2.45484486 0.437931034 0.358695652 0.593103448 184 5 0 285 3L:13509990-13510036 7 235 1771 FBgn0036374 444.0733333 7.2 11.05666667 0.529191875 32.63888889 21.25414531 1 1 1 0.15 dme-miR-34-5p 7mer-A1 ACTGCCA 3L 13515854 13515860 + 3L_13515854_13515860_+ 0.823344792 0.823254239 0.823299516 6.41E-05 Liprin-beta FBtr0075813|FBtr0330342|FBtr0075814 13515759|13515759|13515759 13516276|13516276|13516276 3L + 13515770 13515875 3'utr Liprin-beta FlyBase G30022.1 CGAAAGGAGCACAAATCGATTGAAAGCAAATATGTTTTTTAGTTGTAAGCCCAAAACCTGGCCAAGGATCCCCAAACTGAATGAACTGCCACCTGAACCAATTATG 59 13515851 0.973035859 16 53 319 0.918918919 1.832508913 0.324324324 0.186440678 0.351351351 59 6 0 68 3L:13515770-13515875 7 Liprin-beta FBtr0330342|FBtr0075814|FBtr0075813 13515759|13515759|13515759 13516276|13516276|13516276 ACTGCCA 7mer-A1 dme-miR-34-5p 3L + 13515771 13515868 3'utr Liprin-beta FlyBase G22720.1 GAAAGGAGCACAAATCGATTGAAAGCAAATATGTTTTTTAGTTGTAAGCCCAAAACCTGGCCAAGGATCCCCAAACTGAATGAACTGCCACCTGAACC 43 13515851 0.975870382 9 38 237 0.892307692 1.763427994 0.307692308 0.325581395 0.553846154 43 7 0 58 3L:13515771-13515868 7 27.5 1772 FBgn0036376 801.8733333 34.78666667 53.21666667 0.034294693 0.790532771 0.516755402 3 3 3 0.15 dme-miR-980-5p 8mer-A1 GAAAAACA 3L 1352108 1352115 + 3L_1352108_1352115_+ 0.638432189 0.639449226 0.638940708 0.000719128 CG9166 FBtr0072680 1352030 1352853 3L + 1352079 1352110 3'utr CG9166 FlyBase G27073.1 ACGTGCGAGATCACTTGCAGTGTGATTTGGAA 19 1352105 0.781300346 2 18 126 0.962962963 1.414973348 0.222222222 0.210526316 0.444444444 19 1 0 26 3L:1352079-1352110 3 CG9166 FBtr0072680 1352030 1352853 GAAAAACA 8mer-A1 dme-miR-980-5p 3L + 1352080 1352110 3'utr CG9166 FlyBase G20493.1 CGTGCGAGATCACTTGCAGTGTGATTTGGAA 11 1352106 0.791903675 3 11 71 1 1.230448921 0.411764706 0.454545455 0.647058824 11 0 0 17 3L:1352080-1352110 3 13.5 1773 FBgn0029514 63.66666667 7.47 11.33666667 0.212041885 1.807228916 1.190826228 3 2 2.5 0.15 dme-miR-283-5p 8mer-m1 TGATATTT 3L 13907432 13907439 - 3L_13907432_13907439_- 0.517748867 0.517483079 0.517615973 0.000187949 Rgl FBtr0075793|FBtr0330186|FBtr0075794|FBtr0075796|FBtr0075795 13906895|13906895|13906895|13906895|13906895 13907823|13907766|13907823|13907823|13907823 3L - 13907423 13907471 3'utr Rgl FlyBase G36656.1 ATATTATACAGAGACTCTACTGGAATATTTGCTGATATTTACAAACACA 17 13907443 0.73279272 5 16 145 0.952380952 1.301029996 0.19047619 0.235294118 0.380952381 17 1 0 20 3L:13907423-13907471 8 Rgl FBtr0075795|FBtr0075794|FBtr0075796|FBtr0075793|FBtr0330186 13906895|13906895|13906895|13906895|13906895 13907823|13907823|13907823|13907823|13907766 TGATATTT 8mer-m1 dme-miR-283-5p 3L - 13907404 13907463 3'utr Rgl FlyBase G27670.1 CAGAGACTCTACTGGAATATTTGCTGATATTTACAAACACACATATACATTAAGTATATT 16 13907443 0.989560777 5 15 145 0.909090909 1.301029996 0.090909091 0.3125 0.5 16 2 0 20 3L:13907404-13907463 8 13.5 1774 FBgn0026376 1692.026667 44.63666667 68.24666667 0.007978598 0.302441939 0.197811859 4 4 4 0.15 dme-miR-11-3p 8mer-m1 CTGTGATG 3L 13934344 13934351 + 3L_13934344_13934351_+ 0.461976845 0.461782361 0.461879603 0.000137462 Gl FBtr0075756 13934192 13934656 3L + 13934314 13934361 3'utr Gl FlyBase G30055.1 AATAACACAGCTCCTCAAGACTCCCTGCTCCTGTGATGTGACCTAAAC 102 13934341 0.696635919 10 99 772 0.956521739 1.740362689 0.113043478 0.117647059 0.217391304 102 4 1 110 3L:13934314-13934361 8 Gl FBtr0075756 13934192 13934656 CTGTGATG 8mer-m1 dme-miR-11-3p 3L + 13934316 13934361 3'utr Gl FlyBase G22738.1 TAACACAGCTCCTCAAGACTCCCTGCTCCTGTGATGTGACCTAAAC 51 13934342 0.670338775 6 46 368 0.921052632 1.367976785 0.118421053 0.352941176 0.565789474 51 4 2 70 3L:13934316-13934361 8 75 1775 FBgn0001108 959.94 25.44 38.93 0.078129883 2.948113208 1.926534806 3 2 2.5 0.15 dme-miR-184-5p 8mer-A1 TGATAAGA 3L 13972269 13972276 + 3L_13972269_13972276_+ 0.488058149 0.447701576 0.467879862 0.028536355 ssp2 FBtr0346645 13971662 13973067 3L + 13972181 13972278 3'utr ssp2 FlyBase G30078.1 TAACGAATATACAATAAGATCCTGCTCAGTGGCCACTAAACCACAAAAAAAAAGGAACGTATAAAACCAAACTGAAATTGATAGTAACTGATAAGAGT 26 13972256 0.971456671 10 21 124 0.838709677 1.414973348 0.193548387 0.115384615 0.258064516 26 5 0 26 3L:13972181-13972278 8 ssp2 FBtr0346645 13971662 13973067 TGATAAGA 8mer-A1 dme-miR-184-5p 3L + 13972232 13972285 3'utr ssp2 FlyBase G22754.1 AAGGAACGTATAAAACCAAACTGAAATTGATAGTAACTGATAAGAGTATTGAGA 11 13972260 0.962646606 4 9 54 0.952380952 1.301029996 0.476190476 0.636363636 0.80952381 11 1 0 20 3L:13972232-13972285 8 9.5 1776 FBgn0036389 1101.49 30.04333333 45.97333333 0.008624681 0.316209919 0.206641531 13 9 11 0.15 dme-miR-980-5p 7mer-A1 AAAAACA 3L 13997983 13997989 + 3L_13997983_13997989_+ 0.782797663 0.782520899 0.782659281 0.000195727 CG17361 FBtr0075767 13997837 13998055 3L + 13997957 13998041 3'utr CG17361 FlyBase G30098.1 TGAAAGTACATATGGAGTGTAGTTTTAAAAACAATTTCATGTTCTCATATTGACAATAAGATAATAAAGAAATGATAATCGGATC 46 13997995 0.990520245 13 41 413 0.883333333 1.72427587 0.3 0.217391304 0.4 46 7 0 53 3L:13997957-13998041 7 CG17361 FBtr0075767 13997837 13998055 AAAAACA 7mer-A1 dme-miR-980-5p 3L + 13997915 13998019 3'utr CG17361 FlyBase G22765.1 TTCGATATATTTTTAAAGTAGAAACAAGTTAGCGACTAATAATGAAAGTACATATGGAGTGTAGTTTTAAAAACAATTTCATGTTCTCATATTGACAATAAGATA 38 13997995 0.96893913 14 34 345 0.921568627 1.371067862 0.235294118 0.289473684 0.470588235 38 3 1 47 3L:13997915-13998019 7 31 1777 FBgn0036395 38.90333333 5.8 9.033333333 0.796846885 5.344827586 3.431734317 -12 -12 -12 0.15 dme-miR-965-3p 7mer-m8 TACGCTT 3L 13999609 13999615 - 3L_13999609_13999615_- 0.620146268 0.620142102 0.620144185 2.97E-06 CG8783 FBtr0333025|FBtr0075786|FBtr0075785 13999378|13999378|13999378 13999734|13999734|13999734 3L - 13999592 13999638 3'utr CG8783 FlyBase G36691.1 AAAGTTTGCGAAGCAAATCAATTTACGCTTGTAGACTACATATTTTG 142 13999616 0.758056456 6 142 1141 1 2.201397124 0.213836478 0.105633803 0.201257862 142 0 0 159 3L:13999592-13999638 7 CG8783 FBtr0075786|FBtr0075785|FBtr0333025 13999378|13999378|13999378 13999734|13999734|13999734 TACGCTT 7mer-m8 dme-miR-965-3p 3L - 13999595 13999639 3'utr CG8783 FlyBase G27698.1 TAAAGTTTGCGAAGCAAATCAATTTACGCTTGTAGACTACATATT 82 13999616 0.75354898 5 81 636 0.992248062 2.10720997 0.317829457 0.390243902 0.612403101 82 1 0 128 3L:13999595-13999639 7 112 1778 FBgn0036397 101 5.286666667 8.043333333 1.108910891 21.18537201 13.92457522 1 1 1 0.15 dme-miR-184-5p 6mer3-8 TGATAA 3L 14018034 14018039 + 3L_14018034_14018039_+ 0.897503723 0.989343754 0.943423739 0.064940757 upSET FBtr0075768|FBtr0333050 14017876|14017876 14020148|14020148 3L + 14017973 14018048 3'utr upSET FlyBase G30151.1 AAAGTAATACAGCTTCATACAAAGGCCGCTTTATTGCAGGTTGATTCAAATTTTATGTATCTGATAATAGCTAACC 16 14018028 0.990966598 5 14 146 0.869565217 1.301029996 0.173913043 0.25 0.47826087 16 3 0 20 3L:14017973-14018048 6 upSET FBtr0333050|FBtr0075768 14017876|14017876 14020148|14020148 TGATAA 6mer3-8 dme-miR-184-5p 3L + 14018007 14018055 3'utr upSET FlyBase G22801.1 TGCAGGTTGATTCAAATTTTATGTATCTGATAATAGCTAACCGGTACCA 7 14018028 0.965348333 4 7 75 1 1 0 0.285714286 0.5 7 0 0 10 3L:14018007-14018055 6 9.5 1779 FBgn0036398 2404.643333 22.86666667 35.16333333 0.00395069 0.415451895 0.270167788 6 6 6 0.15 dme-miR-968-5p 7mer-A1 CTACTTA 3L 14018334 14018340 + 3L_14018334_14018340_+ 0.495534734 0.620638541 0.558086638 0.088461745 upSET FBtr0075768|FBtr0333050 14017876|14017876 14020148|14020148 3L + 14018309 14018421 3'utr upSET FlyBase G30154.1 TGTCACAGCAATCAAACCGCTTAACCTACTTATAAACAAGGAACCTACAATATATATATATGCACATGTATATGCTAGACACCTTTAAATAGAGCCTATGTAGCGCGATATAA 25 14018338 0.888485288 13 25 135 1 1.51851394 0.090909091 0.16 0.363636364 25 0 0 33 3L:14018309-14018421 7 upSET FBtr0333050|FBtr0075768 14017876|14017876 14020148|14020148 CTACTTA 7mer-A1 dme-miR-968-5p 3L + 14018308 14018345 3'utr upSET FlyBase G22803.1 ATGTCACAGCAATCAAACCGCTTAACCTACTTATAAAC 12 14018320 0.912550699 5 9 62 0.8125 0.636822098 0 0.166666667 0.375 12 1 2 13 3L:14018308-14018345 7 10.5 1780 FBgn0036398 2404.643333 22.86666667 35.16333333 0.004366552 0.459183673 0.298606503 -4 14 5 0.15 dme-miR-282-5p 6mer3-8 AGAGGC 3L 14019021 14019026 + 3L_14019021_14019026_+ 0.975725316 0.978047735 0.976886525 0.001642185 upSET FBtr0075768|FBtr0333050 14017876|14017876 14020148|14020148 3L + 14018767 14019122 3'utr upSET FlyBase G30159.1 ATTTAAAACACATTACCTAGTACAGAACTTGGCAAATAATACAAACTGTAATTGTTAGAGAGACCAGCGAAAACAAAATCCGGAACTAACAAAATTGTAAATAATATTTTTAAAACCCAAACATGAGCAACCAAAAGGATGAAAGTAAAAACTACTTGTCTTATTAAGCAAGTTAGTTAAGTAAGTTAAAAAGAGTACAAAGCGAGGGTTAATTGATTGAAATTATGCTAATGGATCGCATTAAAATTGTAAATAGAGGCAGCAACAGAAAGTGTCCGTAGCCATTTTCGTATATAGGCTTAATTATTTTAATCTTTCGAATTTCGTCTAAAGTAAAATATTCACAAATTAATTGT 108 14019019 0.9727426 37 100 601 0.932835821 2.096910013 0.186567164 0.175925926 0.335820896 108 9 0 125 3L:14018767-14019122 6 upSET FBtr0333050|FBtr0075768 14017876|14017876 14020148|14020148 AGAGGC 6mer3-8 dme-miR-282-5p 3L + 14018846 14019047 3'utr upSET FlyBase G22808.1 CCGGAACTAACAAAATTGTAAATAATATTTTTAAAACCCAAACATGAGCAACCAAAAGGATGAAAGTAAAAACTACTTGTCTTATTAAGCAAGTTAGTTAAGTAAGTTAAAAAGAGTACAAAGCGAGGGTTAATTGATTGAAATTATGCTAATGGATCGCATTAAAATTGTAAATAGAGGCAGCAACAGAAAGTGTCCGTAG 51 14019019 0.974266107 18 40 212 0.911392405 1.556302501 0.164556962 0.431372549 0.632911392 51 6 1 72 3L:14018846-14019047 6 21.5 1781 FBgn0036398 2404.643333 22.86666667 35.16333333 0.008941035 0.940233236 0.611432363 2 2 2 0.15 dme-miR-79-3p 6mer3-8 TAGCTT 3L 14019144 14019149 + 3L_14019144_14019149_+ 0.795744867 0.498561081 0.647152974 0.21014068 upSET FBtr0075768|FBtr0333050 14017876|14017876 14020148|14020148 3L + 14019124 14019209 3'utr upSET FlyBase G30160.1 ACATTAATTTGTTTAATACATAGCTTGTCATTAGACTTAGATCAAGATTTTATTCAGATCAATGCTCACCGAGGAATGTGCCACAA 37 14019155 0.990023079 11 33 320 0.904761905 1.579783597 0.023809524 0.135135135 0.238095238 37 4 0 38 3L:14019124-14019209 6 upSET FBtr0333050|FBtr0075768 14017876|14017876 14020148|14020148 TAGCTT 6mer3-8 dme-miR-79-3p 3L + 14019137 14019168 3'utr upSET FlyBase G22809.1 TAATACATAGCTTGTCATTAGACTTAGATCAA 21 14019154 0.711879998 5 17 173 0.848484848 1.146128036 0 0.333333333 0.575757576 21 4 1 28 3L:14019137-14019168 6 26.5 1782 FBgn0036398 2404.643333 22.86666667 35.16333333 0.011020345 1.158892128 0.753625936 -11 -10 -10.5 0.15 dme-miR-970-3p 8mer-A1 TCTTATGA 3L 14021058 14021065 - 3L_14021058_14021065_- 0.630648987 0.63009399 0.630371489 0.000392444 ptip FBtr0075784 14020313 14021220 3L - 14020930 14021106 3'utr ptip FlyBase G36703.1 CGCAATGTCATTGGCCATTGATGTTGTAGGCCGCGCCAATTTCTTATGATATACCAACGCGAAACTAGTCCATAGAGTTCGTCAATTCAATCGGGCATGCCGGAACGAATGAGTTTATAGGGTCTCGGGCACATCGGCATATCGGTCACAGCTAGACAAATTTATTGCATCCCCCTA 82 14021066 0.981844784 15 79 588 0.956521739 1.944482672 0.358695652 0.109756098 0.206521739 82 4 0 88 3L:14020930-14021106 8 ptip FBtr0075784 14020313 14021220 TCTTATGA 8mer-A1 dme-miR-970-3p 3L - 14020997 14021088 3'utr ptip FlyBase G27705.1 TGATGTTGTAGGCCGCGCCAATTTCTTATGATATACCAACGCGAAACTAGTCCATAGAGTTCGTCAATTCAATCGGGCATGCCGGAACGAAT 32 14021066 0.999759654 7 31 195 0.955555556 1.633468456 0.177777778 0.28125 0.488888889 32 2 0 43 3L:14020997-14021088 8 40 1783 FBgn0052133 645.9666667 9.623333333 14.77 0.0619227 4.156563907 2.708192282 1 1 1 0.15 dme-miR-92b-3p 6mer2-7 TGCAAT 3L 14034051 14034056 + 3L_14034051_14034056_+ 0.779735486 0.567979402 0.673857444 0.149734174 CG6650 FBtr0075769|FBtr0304672|FBtr0343100 14033995|14033995|14033995 14034640|14034640|14034909 3L + 14033968 14034169 stop_codon CG6650 FlyBase G30174.1 CTGCCTCCGGACTCGCGGCACAGTTGTAGGATCGGCTATCACAATGGGACAGGCAAAGACTGCATAGTATTTCACTAGAAACCTGCAATGAAAGACTCGAATAGAAGGCCAGGACGAAACCCCGATGCATTCCCCCGCTGGATGGACATGAACTCGGCATGTTTAGCACCTTAGTGACCTTAGAAACGCGTTACCTTCACAC 165 14034032 0.952965366 23 147 648 0.897297297 1.178715403 0.178378378 0.096969697 0.194594595 165 9 10 166 3L:14033968-14034169 6 CG6650 FBtr0343100|FBtr0075769|FBtr0304672 14033995|14033995|14033995 14034909|14034640|14034640 TGCAAT 6mer2-7 dme-miR-92b-3p 3L + 14033963 14034171 stop_codon CG6650 FlyBase G22821.1 CATCTCTGCCTCCGGACTCGCGGCACAGTTGTAGGATCGGCTATCACAATGGGACAGGCAAAGACTGCATAGTATTTCACTAGAAACCTGCAATGAAAGACTCGAATAGAAGGCCAGGACGAAACCCCGATGCATTCCCCCGCTGGATGGACATGAACTCGGCATGTTTAGCACCTTAGTGACCTTAGAAACGCGTTACCTTCACACAA 86 14034032 0.946291426 22 77 314 0.875968992 1.149988456 0.147286822 0.418604651 0.612403101 86 9 7 113 3L:14033963-14034171 6 38 1784 FBgn0036402 661.0066667 31.6 48.21 0.057488074 1.202531646 0.788218212 19 19 19 0.15 dme-bantam-3p 7mer-A1 GATCTCA 3L 14052405 14052411 + 3L_14052405_14052411_+ 0.820850058 0.821712748 0.821281403 0.00060995 CG6833 FBtr0302433|FBtr0075774 14052207|14052207 14052469|14052469 3L + 14052392 14052422 3'utr CG6833 FlyBase G30205.1 AAAAGCAGGCTCGGATCTCATGATGAAACCA 17 14052412 0.680372651 3 15 65 0.954545455 1.322219295 0.181818182 0.235294118 0.409090909 17 1 0 21 3L:14052392-14052422 7 CG6833 FBtr0302433|FBtr0075774 14052207|14052207 14052469|14052469 GATCTCA 7mer-A1 dme-bantam-3p 3L + 14052393 14052420 3'utr CG6833 FlyBase G22843.1 AAAGCAGGCTCGGATCTCATGATGAAAC 19 14052412 0.65185109 2 19 71 1 1.397940009 0.32 0.315789474 0.48 19 0 0 25 3L:14052393-14052420 7 18 1785 FBgn0036405 208.48 21.87 33.59 0.086339217 0.823045267 0.535873772 -7 -7 -7 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3L 14070252 14070258 + 3L_14070252_14070258_+ 0.430087449 0.429450002 0.429768725 0.00045071 CG32138 FBtr0075776|FBtr0075775|FBtr0114573|FBtr0334053 14070133|14070133|14070133|14069144 14070369|14070369|14071583|14070369 3L + 14070143 14070329 3'utr CG32138 FlyBase G30241.1 ACGAGATAGAGATCGACGCAATGACGACGACGGGGCAATGGCAACGAATCGAAAATCAAAATTCACACTGAAACCGAAACAAAAAGAGAACATTACAGATACTGCAATATGTGATTAGGCGATTAAATTGTTTTCGAGACACTCTTACACATACACAAATTCACATTCCCTTTTATGCAAATCCTTA 3892 14070258 0.983714556 28 3721 28137 0.96001729 2.267367313 0.208126216 0.156731757 0.290685109 3892 162 23 4442 3L:14070143-14070329 7 CG32138 FBtr0334053|FBtr0114573|FBtr0075775|FBtr0075776 14069144|14070133|14070133|14070133 14070369|14071583|14070369|14070369 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 14070144 14070333 3'utr CG32138 FlyBase G22873.1 CGAGATAGAGATCGACGCAATGACGACGACGGGGCAATGGCAACGAATCGAAAATCAAAATTCACACTGAAACCGAAACAAAAAGAGAACATTACAGATACTGCAATATGTGATTAGGCGATTAAATTGTTTTCGAGACACTCTTACACATACACAAATTCACATTCCCTTTTATGCAAATCCTTATATT 2356 14070258 0.980988992 30 2208 16293 0.943160691 2.152410664 0.225232404 0.40959253 0.630544489 2356 190 24 3551 3L:14070144-14070333 7 2967 1786 FBgn0267795 5755.37 129.1033333 198.11 0.515518551 22.98159097 14.97652819 -6 -6 -6 0.15 dme-miR-12-5p 6mer3-8 AATACT 3L 14070706 14070711 + 3L_14070706_14070711_+ 0.994969021 0.634525505 0.814747263 0.254872043 CG32138 FBtr0114573 14070133 14071583 3L + 14070612 14070737 3'utr CG32138 FlyBase G30244.1 TTACCCTGTGTACATACATATACTTACATATATATCAAATTATATATGTGCTATTTAATTATATTTTTTAAACTTACGTTTTAACCAAATACGAAATACTTGCTGCATCCATCCGAGATGGCAAAT 41 14070711 0.981452416 19 37 302 0.921568627 0.973127854 0.098039216 0.219512195 0.37254902 41 0 4 47 3L:14070612-14070737 6 CG32138 FBtr0114573 14070133 14071583 AATACT 6mer3-8 dme-miR-12-5p 3L + 14070612 14070734 3'utr CG32138 FlyBase G22876.1 TTACCCTGTGTACATACATATACTTACATATATATCAAATTATATATGTGCTATTTAATTATATTTTTTAAACTTACGTTTTAACCAAATACGAAATACTTGCTGCATCCATCCGAGATGGCA 18 14070711 0.988648262 10 15 134 0.846153846 0.740362689 0 0.277777778 0.5 18 1 3 22 3L:14070612-14070734 6 13.5 1787 FBgn0267795 5755.37 129.1033333 198.11 0.002345635 0.104567401 0.06814396 -5 -5 -5 0.15 dme-miR-932-5p 6mer2-7 GAATTG 3L 14070817 14070822 + 3L_14070817_14070822_+ 0.999635689 0.992340074 0.995987881 0.005158768 CG32138 FBtr0114573 14070133 14071583 3L + 14070770 14070855 3'utr CG32138 FlyBase G30245.1 TCCGAATTTTAATTAATTTTATGAAATTAGTAAGTCAAATAAGCATTGAATTGTATGAGAAGAGAGTAAAACGCATTAAACTTTTG 30 14070820 0.977059685 12 28 179 0.971428571 1.531478917 0.485714286 0.1 0.228571429 30 1 0 34 3L:14070770-14070855 6 CG32138 FBtr0114573 14070133 14071583 GAATTG 6mer2-7 dme-miR-932-5p 3L + 14070798 14070836 3'utr CG32138 FlyBase G22877.1 AGTAAGTCAAATAAGCATTGAATTGTATGAGAAGAGAGT 15 14070820 0.599484248 5 15 79 1 1.342422681 0.318181818 0.266666667 0.5 15 0 0 22 3L:14070798-14070836 6 18.5 1788 FBgn0267795 5755.37 129.1033333 198.11 0.003214389 0.143296068 0.093382464 -3 -3 -3 0.15 dme-miR-92b-3p 6mer3-8 GTGCAA 3L 143868 143873 + 3L_143868_143873_+ 0.992619652 0.994346923 0.993483288 0.001221315 Pdk1 FBtr0072464|FBtr0072470|FBtr0072467|FBtr0072471|FBtr0072466|FBtr0072465|FBtr0333218 143819|143819|143819|143819|143819|143819|143819 144642|145293|145293|145293|145293|144642|145895 3L + 143737 144054 stop_codon Pdk1 FlyBase G26662.1 CAAGCTTCGACGGCGTCTGACAACCGGACATTGGGTAGCACCAGAACGGGGACGTCACCTAGCAAGAAGACGGCGTCTAAGTAAACGTAGTCCTATTTATAGCAATGTGAAATTAATTTAGTTGAAATTTAGTGCAAACGAAGCGATGGCGTAGAAGAGGGCGGGAATAGAAGTAAGCTTAGAAGTAGAAGTAAGTGATGAAGGGGAAATAATGATCGTGTCTCTAGTGCTAATTAGAACCAAATTTCTGTTTTCCGATTTGTATTGTGCTTAGGGCGAAAATATAACACTAGAATAAACTTATCTAAAGTAAAATAC 336 143865 0.981656492 48 321 2349 0.955380577 1.782950133 0.367454068 0.119047619 0.223097113 336 12 5 364 3L:143737-144054 6 Pdk1 FBtr0333218|FBtr0072468|FBtr0072470|FBtr0072466|FBtr0072465|FBtr0072464|FBtr0072469|FBtr0072467|FBtr0072471 143819|143819|143819|143819|143819|143819|143819|143819|143819 145895|144054|145293|145293|144642|144642|144054|145293|145293 GTGCAA 6mer3-8 dme-miR-92b-3p 3L + 143815 143909 stop_codon Pdk1 FlyBase G20164.1 AAGTAAACGTAGTCCTATTTATAGCAATGTGAAATTAATTTAGTTGAAATTTAGTGCAAACGAAGCGATGGCGTAGAAGAGGGCGGGAATAGAAG 169 143865 0.976748223 12 158 1070 0.930041152 1.752048448 0.440329218 0.343195266 0.543209877 169 14 3 226 3L:143815-143909 6 168.5 1789 FBgn0020386 1614.923333 45.11666667 69.42333333 0.104339318 3.734761729 2.42713785 3 3 3 0.15 dme-miR-1007-3p 6mer3-8 TGAGCT 3L 144398 144403 + 3L_144398_144403_+ 0.652448217 0.959782679 0.806115448 0.217318309 Pdk1 FBtr0072464|FBtr0072470|FBtr0072467|FBtr0072471|FBtr0072466|FBtr0072465|FBtr0333218 143819|143819|143819|143819|143819|143819|143819 144642|145293|145293|145293|145293|144642|145895 3L + 144366 144415 5'utr Pdk1 FlyBase G26665.1 TTGTAAACAGTGTAACTATGTACAGAACTATGTGAGCTATATGCACACGG 14 144384 0.7993439 5 14 89 1 1.255272505 0.111111111 0.214285714 0.388888889 14 0 0 18 3L:144366-144415 6 Pdk1 FBtr0333218|FBtr0072470|FBtr0072466|FBtr0072465|FBtr0072464|FBtr0072467|FBtr0072471 143819|143819|143819|143819|143819|143819|143819 145895|145293|145293|144642|144642|145293|145293 TGAGCT 6mer3-8 dme-miR-1007-3p 3L + 144367 144416 5'utr Pdk1 FlyBase G20168.1 TGTAAACAGTGTAACTATGTACAGAACTATGTGAGCTATATGCACACGGC 13 144384 0.760431845 5 11 81 0.85 1.230448921 0.5 0.461538462 0.65 13 3 0 17 3L:144367-144416 6 9 1790 FBgn0020386 1614.923333 45.11666667 69.42333333 0.00557302 0.199482822 0.12963941 14 14 14 0.15 dme-miR-14-3p 6mer3-8 AAGACT 3L 144608 144613 + 3L_144608_144613_+ 0.989398484 0.828458819 0.908928651 0.113801553 Pdk1 FBtr0072464|FBtr0072470|FBtr0072467|FBtr0072471|FBtr0072466|FBtr0072465|FBtr0333218 143819|143819|143819|143819|143819|143819|143819 144642|145293|145293|145293|145293|144642|145895 3L + 144538 144629 5'utr Pdk1 FlyBase G26667.1 CGCTAATTATCATTATTTATCATTCTCATTATGCTTTTCGTTTACCTATTTGCCCTATAATGAAATGTATAAGACTTGAGCTACCCTAATAA 64 144578 0.990181488 16 62 622 0.972972973 1.857332496 0.121621622 0.15625 0.27027027 64 2 0 72 3L:144538-144629 6 Pdk1 FBtr0333218|FBtr0072470|FBtr0072466|FBtr0072465|FBtr0072464|FBtr0072467|FBtr0072471 143819|143819|143819|143819|143819|143819|143819 145895|145293|145293|144642|144642|145293|145293 AAGACT 6mer3-8 dme-miR-14-3p 3L + 144499 144627 5'utr Pdk1 FlyBase G20169.1 CACGCTCAACTGTTTAGGTAATTCTAATATACAGTTTAACGCTAATTATCATTATTTATCATTCTCATTATGCTTTTCGTTTACCTATTTGCCCTATAATGAAATGTATAAGACTTGAGCTACCCTAAT 44 144587 0.986589864 15 40 398 0.876923077 1.755874856 0.184615385 0.386363636 0.584615385 44 8 0 57 3L:144499-144627 6 19.5 1791 FBgn0020386 1614.923333 45.11666667 69.42333333 0.012074877 0.432212782 0.280885389 30 21 25.5 0.15 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 14541397 14541404 - 3L_14541397_14541404_- 0.642851047 0.642853986 0.642852516 2.12E-06 Gbs-70E FBtr0333037|FBtr0075724 14540935|14541044 14542118|14542118 3L - 14541352 14541432 3'utr Gbs-70E FlyBase G36754.1 TTTTATCTTTTTGGTTACTTGAAACGCTAAGACTGAAATGGCTTGTTATGGAGAAGAAAACACGTCCTGCAATACATTATA 403 14541405 0.934959122 14 377 2083 0.931623932 1.794388449 0.162393162 0.141439206 0.260683761 403 26 6 436 3L:14541352-14541432 8 Gbs-70E FBtr0075724|FBtr0333037 14541044|14540935 14542118|14542118 AAGACTGA 8mer-A1 dme-miR-14-3p 3L - 14541350 14541420 3'utr Gbs-70E FlyBase G27745.1 GGTTACTTGAAACGCTAAGACTGAAATGGCTTGTTATGGAGAAGAAAACACGTCCTGCAATACATTATATA 261 14541405 0.91487113 10 236 1092 0.908641975 1.963787827 0.187654321 0.390804598 0.607407407 261 34 3 368 3L:14541350-14541420 8 317 1792 FBgn0036428 388.9433333 16.83333333 25.64666667 0.815028753 18.83168317 12.36028074 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 14541698 14541703 - 3L_14541698_14541703_- 0.997955433 0.998904089 0.998429761 0.000670832 Gbs-70E FBtr0333037|FBtr0333037|FBtr0333037|FBtr0075724|FBtr0075724|FBtr0075724|FBtr0075723|FBtr0075723|FBtr0075723 14540935|14540935|14540935|14541044|14541044|14541044|14541535|14541535|14541535 14542118|14542118|14542118|14542118|14542118|14542118|14542118|14542118|14542118 3L - 14541662 14541741 3'utr Gbs-70E FlyBase G36756.1 TTGGAAAAGATAGATTTATATGTTTACCTGTATGCCTGTGTGATCGTCTACATCTATATAACTGATACTAGATTTATGTT 30 14541705 0.863588096 9 27 255 0.906976744 1.290034611 0.046511628 0.3 0.511627907 30 3 1 39 3L:14541662-14541741 6 Gbs-70E FBtr0075723|FBtr0075723|FBtr0075723|FBtr0075724|FBtr0075724|FBtr0075724|FBtr0333037|FBtr0333037|FBtr0333037 14541535|14541535|14541535|14541044|14541044|14541044|14540935|14540935|14540935 14542118|14542118|14542118|14542118|14542118|14542118|14542118|14542118|14542118 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 14541653 14541716 3'utr Gbs-70E FlyBase G27747.1 ACCTGTATGCCTGTGTGATCGTCTACATCTATATAACTGATACTAGATTTATGTTAACTAAAAA 16 14541705 0.759781657 10 16 134 1 1.342422681 0.045454545 0.125 0.363636364 16 0 0 22 3L:14541653-14541716 6 14.5 1793 FBgn0036428 388.9433333 16.83333333 25.64666667 0.037280495 0.861386139 0.565375617 2 2 2 0.15 dme-miR-305-3p 8mer-A1 ATGTGCCA 3L 14541904 14541911 - 3L_14541904_14541911_- 0.569464116 0.564401204 0.56693266 0.003580011 Gbs-70E FBtr0333037|FBtr0075724|FBtr0075723 14540935|14541044|14541535 14542118|14542118|14542118 3L - 14541882 14541950 3'utr Gbs-70E FlyBase G36757.1 TGACCTAAGCTAATACCCGGTACAAATATCCCAATTTTAATGTGCCATTGACTTGAGGTTTACTCAATA 15 14541901 0.896376721 4 12 108 0.833333333 0.875061263 0 0.2 0.333333333 15 2 1 15 3L:14541882-14541950 8 Gbs-70E FBtr0075723|FBtr0075724|FBtr0333037 14541535|14541044|14540935 14542118|14542118|14542118 ATGTGCCA 8mer-A1 dme-miR-305-3p 3L - 14541861 14541913 3'utr Gbs-70E FlyBase G27748.1 TAATGTGCCATTGACTTGAGGTTTACTCAATATAAAATGAGATAGGAGGGCTT 12 14541896 0.985621338 8 11 82 0.894736842 1.230448921 0 0.5 0.684210526 12 2 0 17 3L:14541861-14541913 8 9 1794 FBgn0036428 388.9433333 16.83333333 25.64666667 0.023139618 0.534653465 0.350922797 -10 -15 -12.5 0.15 dme-miR-11-3p 7mer-m1 TGTGATG 3L 14628472 14628478 - 3L_14628472_14628478_- 0.611622346 0.586555409 0.599088877 0.017724975 RecQ5 FBtr0100362|FBtr0075714 14628158|14628158 14630439|14630508 3L - 14628457 14628496 5'utr-intron RecQ5 FlyBase G36768.1 TTGCTCACTCAGCGCATTTGTGATGGAAGCTTAGGTAAGA 17 14628479 0.752964507 3 17 106 1 1.380211242 0 0.235294118 0.458333333 17 0 0 24 3L:14628457-14628496 7 RecQ5 FBtr0075714|FBtr0100362 14628158|14628158 14630508|14630439 TGTGATG 7mer-m1 dme-miR-11-3p 3L - 14628464 14628504 5'utr RecQ5 FlyBase G27756.1 TGGCAAAATTGCTCACTCAGCGCATTTGTGATGGAAGCTTA 12 14628479 0.71989218 4 11 77 0.823529412 1.146128036 0 0.333333333 0.529411765 12 3 0 14 3L:14628464-14628504 7 14.5 1795 FBgn0027375 1332.03 47.24333333 72.63666667 0.010885641 0.306921612 0.199623698 1 1 1 0.15 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 14630025 14630031 - 3L_14630025_14630031_- 0.807239184 0.820392657 0.813815921 0.009300929 RecQ5 FBtr0100362|FBtr0075714 14628158|14628158 14630439|14630508 3L - 14629970 14630054 5'utr RecQ5 FlyBase G36773.1 TTAATCTTCGAAAGCAAATTAGTGCAGCTAGGCAGTTGGAACAGGAAACAATTGCTCAAATATCTCGCGTTCGAATGGCAGAAGC 14 14630035 0.969930584 8 12 70 0.933333333 1.146128036 0.2 0.071428571 0.133333333 14 1 0 14 3L:14629970-14630054 7 RecQ5 FBtr0075714|FBtr0100362 14628158|14628158 14630508|14630439 GCAGCTA 7mer-A1 dme-miR-980-3p 3L - 14630014 14630050 5'utr RecQ5 FlyBase G27759.1 TCTTCGAAAGCAAATTAGTGCAGCTAGGCAGTTGGAA 12 14630035 0.688493435 4 12 50 1 1.230448921 0.235294118 0.25 0.470588235 12 0 0 17 3L:14630014-14630050 7 10 1796 FBgn0027375 1332.03 47.24333333 72.63666667 0.007507338 0.211670077 0.137671516 4 4 4 0.15 dme-miR-1007-3p 7mer-m8 TGAGCTT 3L 1467403 1467409 + 3L_1467403_1467409_+ 0.368300721 0.620200448 0.494250584 0.178119986 rho FBtr0333207|FBtr0072694 1467352|1467352 1468944|1468475 3L + 1467394 1467441 3'utr rho FlyBase G27088.1 GAATCTGCTTGAGCTTCAGGAGAGATCGAGAGACAGAGAGTTGGTGGA 9 1467408 0.955610728 4 8 36 0.9 0.954242509 0.4 0.111111111 0.2 9 1 0 9 3L:1467394-1467441 7 rho FBtr0333207|FBtr0072694 1467352|1467352 1468944|1468475 TGAGCTT 7mer-m8 dme-miR-1007-3p 3L + 1467397 1467436 3'utr rho FlyBase G20506.1 TCTGCTTGAGCTTCAGGAGAGATCGAGAGACAGAGAGTTG 10 1467405 0.671125668 3 6 33 0.6875 0.740362689 0.9375 0.4 0.625 10 4 1 11 3L:1467397-1467436 7 6.5 1797 FBgn0004635 880.87 41.8 65 0.007379068 0.155502392 0.1 -5 -2 -3.5 0.15 dme-miR-999-3p 6mer3-8 AGTTAA 3L 1467539 1467544 + 3L_1467539_1467544_+ 0.998815252 0.958876678 0.978845965 0.028240855 rho FBtr0333207|FBtr0072694 1467352|1467352 1468944|1468475 3L + 1467508 1467555 3'utr rho FlyBase G27089.1 TTAGCATTATCTCGTTATCGTTACCGTTTGCAGTTAAACGTTTCAGTT 6 1467535 0.990548828 3 5 62 0.888888889 0.602059991 0 0.333333333 0.555555556 6 0 1 8 3L:1467508-1467555 6 rho FBtr0333207|FBtr0072694 1467352|1467352 1468944|1468475 AGTTAA 6mer3-8 dme-miR-999-3p 3L + 1467505 1467555 3'utr rho FlyBase G20507.1 TCGTTAGCATTATCTCGTTATCGTTACCGTTTGCAGTTAAACGTTTCAGTT 7 1467535 0.986245425 3 7 60 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 3L:1467505-1467555 6 4 1798 FBgn0004635 880.87 41.8 65 0.004540965 0.09569378 0.061538462 4 4 4 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 1467677 1467683 + 3L_1467677_1467683_+ 0.720825348 0.716478551 0.71865195 0.003073581 rho FBtr0333207|FBtr0333207|FBtr0333207|FBtr0072694|FBtr0072694|FBtr0072694 1467352|1467352|1467352|1467352|1467352|1467352 1468944|1468944|1468944|1468475|1468475|1468475 3L + 1467651 1467702 3'utr rho FlyBase G27090.1 CGAAGCCGAAACGTGTAAACAAATGTTGTGATAGAACCAAAGACTGAATTTA 65 1467675 0.842953324 5 60 354 0.936708861 1.568201724 0 0.2 0.341772152 65 4 1 74 3L:1467651-1467702 7 rho FBtr0333207|FBtr0333207|FBtr0333207|FBtr0072694|FBtr0072694|FBtr0072694 1467352|1467352|1467352|1467352|1467352|1467352 1468944|1468944|1468944|1468475|1468475|1468475 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 1467657 1467703 3'utr rho FlyBase G20508.1 CGAAACGTGTAAACAAATGTTGTGATAGAACCAAAGACTGAATTTAT 60 1467674 0.829437338 7 56 327 0.94047619 1.897627091 0.023809524 0.3 0.5 60 5 0 79 3L:1467657-1467703 7 62.5 1799 FBgn0004635 880.87 41.8 65 0.070952581 1.495215311 0.961538462 2 3 2.5 0.15 dme-bantam-3p 6mer3-8 TGATCT 3L 14750650 14750655 - 3L_14750650_14750655_- 0.964830285 0.908632415 0.93673135 0.039737916 Trl FBtr0075705|FBtr0075706|FBtr0333046 14750240|14750240|14750240 14751158|14752905|14751158 3L - 14750615 14750709 5'utr Trl FlyBase G36781.1 TAAGTTTAAAAATCCTTGAGTTACAAAGATTTACTTAAGCAGCTCAAAAGTAATTGATCTGATCAAAAGAGAGTTCGCTCAACAAGGTTTCTAAA 27 14750656 0.97315691 9 26 158 0.971428571 1.230448921 0.114285714 0.259259259 0.428571429 27 0 1 34 3L:14750615-14750709 6 Trl FBtr0333046|FBtr0075705|FBtr0075706 14750240|14750240|14750240 14751158|14751158|14752905 TGATCT 6mer3-8 dme-bantam-3p 3L - 14750600 14750677 5'utr Trl FlyBase G27765.1 ACTTAAGCAGCTCAAAAGTAATTGATCTGATCAAAAGAGAGTTCGCTCAACAAGGTTTCTAAAAACCCACCCACCAAC 19 14750656 0.968011888 3 18 103 1 1.397940009 0.24 0.263157895 0.44 19 0 0 25 3L:14750600-14750677 6 17 1800 FBgn0013263 1897.606667 85.71333333 130.6566667 0.008958653 0.198335537 0.130111998 1 1 1 0.15 dme-miR-970-3p 8mer-A1 TCTTATGA 3L 14750986 14750993 - 3L_14750986_14750993_- 0.584095167 0.629977314 0.60703624 0.032443544 Trl FBtr0075705|FBtr0075706|FBtr0333046|FBtr0075703 14750240|14750240|14750240|14750952 14751158|14752905|14751158|14751158 3L - 14750954 14751050 5'utr Trl FlyBase G36783.1 AATTAGTTTTAGAAAGCCAGAAAGGCATATTTAGTTGTTTACCGTTTTGTTGTACAATCTTATGACTTTAAATGTTGATTTACCCCTCCTACAACTT 36 14750971 0.706241606 15 32 305 0.88372093 1.278753601 0.162790698 0.166666667 0.302325581 36 4 1 38 3L:14750954-14751050 8 Trl FBtr0333046|FBtr0075703|FBtr0075705|FBtr0075706 14750240|14750952|14750240|14750240 14751158|14751158|14751158|14752905 TCTTATGA 8mer-A1 dme-miR-970-3p 3L - 14750945 14751000 5'utr-coding Trl FlyBase G27767.1 TGTACAATCTTATGACTTTAAATGTTGATTTACCCCTCCTACAACTTATTTTGTTG 9 14750964 0.985504072 6 9 82 1 1.176091259 0.2 0.555555556 0.733333333 9 0 0 15 3L:14750945-14751000 8 9 1801 FBgn0013263 1897.606667 85.71333333 130.6566667 0.004742816 0.105001167 0.068882823 -22 -29 -25.5 0.15 dme-miR-965-3p 6mer2-7 ACGCTT 3L 14751088 14751093 - 3L_14751088_14751093_- 0.995262069 0.999890651 0.99757636 0.003272914 Trl FBtr0075705|FBtr0075706|FBtr0333046|FBtr0075703 14750240|14750240|14750240|14750952 14751158|14752905|14751158|14751158 3L - 14751060 14751100 5'utr Trl FlyBase G36784.1 TTGCTAAACGCTTTAAATATTCTCTTTGCGGAATGCGTAGA 5 14751074 0.970214971 5 5 44 1 0.698970004 0.2 0 0 5 0 0 5 3L:14751060-14751100 6 Trl FBtr0333046|FBtr0075703|FBtr0075705|FBtr0075706 14750240|14750952|14750240|14750240 14751158|14751158|14751158|14752905 ACGCTT 6mer2-7 dme-miR-965-3p 3L - 14751016 14751111 5'utr Trl FlyBase G27768.1 AATTTGGGTTTTTGCTAAACGCTTTAAATATTCTCTTTGCGGAATGCGTAGACAAATTCTAAATTAGTTTTAGAAAGCCAGAAAGGCATATTTAGT 13 14751087 0.986098189 8 12 99 0.944444444 0.929418926 0.333333333 0.384615385 0.555555556 13 0 1 17 3L:14751016-14751111 6 4.5 1802 FBgn0013263 1897.606667 85.71333333 130.6566667 0.002371408 0.052500583 0.034441411 -19 -6 -12.5 0.15 dme-miR-317-3p 8mer-A1 TGTGTTCA 3L 14752740 14752747 - 3L_14752740_14752747_- 0.630737448 0.630902598 0.630820023 0.000116814 Trl FBtr0075707|FBtr0075706 14747927|14750240 14752905|14752905 3L - 14752726 14752795 5'utr Trl FlyBase G36795.1 ATAACAATCAGCAAACAAACAAATTCCCCGTGATCTGATCGAATGATTTGTGTTCATTTCCTGTATCATT 294 14752748 0.637609015 11 286 2205 0.971590909 2.534026106 0.09375 0.173469388 0.309659091 294 10 0 342 3L:14752726-14752795 8 Trl FBtr0075706|FBtr0075707 14750240|14747927 14752905|14752905 TGTGTTCA 8mer-A1 dme-miR-317-3p 3L - 14752723 14752828 5'utr Trl FlyBase G27776.1 AAAAAACATAACACTCACAAAAACGATTTGTAAATAACAATCAGCAAACAAACAAATTCCCCGTGATCTGATCGAATGATTTGTGTTCATTTCCTGTATCATTTTT 243 14752748 0.98289456 13 237 1790 0.975903614 2.209515015 0.135542169 0.308641975 0.493975904 243 7 1 324 3L:14752723-14752828 8 103.5 1803 FBgn0013263 1897.606667 85.71333333 130.6566667 0.054542388 1.207513417 0.792152461 1 1 1 0.15 dme-miR-8-3p 6mer3-8 CAGTAT 3L 14766285 14766290 + 3L_14766285_14766290_+ 0.746962815 0.671739639 0.709351227 0.053190835 CG9384 FBtr0333044|FBtr0075690 14765702|14765702 14767703|14767703 3L + 14766266 14766296 3'utr CG9384 FlyBase G30297.1 TTGTTTAATCCCAAGCTGTCAGTATATTTTT 7 14766282 0.888513821 2 7 66 1 0.84509804 0 0 0 7 0 0 7 3L:14766266-14766296 6 CG9384 FBtr0333044|FBtr0075690 14765702|14765702 14767703|14767703 CAGTAT 6mer3-8 dme-miR-8-3p 3L + 14766269 14766319 3'utr CG9384 FlyBase G22916.1 TTTAATCCCAAGCTGTCAGTATATTTTTCGCATAACCATATGGATTTGATA 11 14766284 0.741560886 7 8 82 0.75 1.079181246 0 0.363636364 0.5625 11 4 0 12 3L:14766269-14766319 6 7.5 1804 FBgn0036446 489.33 13.20333333 20.20333333 0.01532708 0.568038374 0.37122587 3 1 2 0.15 dme-miR-970-3p 6mer3-8 TCTTAT 3L 14766593 14766598 + 3L_14766593_14766598_+ 0.999998514 0.999997677 0.999998096 5.66E-07 CG9384 FBtr0333044|FBtr0075690 14765702|14765702 14767703|14767703 3L + 14766564 14766619 3'utr CG9384 FlyBase G30301.1 AGTGATTAAGAATCTCGAACCCGCTGAAATCTTATCGATCAATTAAGAATTAAGAA 7 14766596 0.975953937 5 6 34 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3L:14766564-14766619 6 CG9384 FBtr0333044|FBtr0075690 14765702|14765702 14767703|14767703 TCTTAT 6mer3-8 dme-miR-970-3p 3L + 14766563 14766601 3'utr CG9384 FlyBase G22917.1 AAGTGATTAAGAATCTCGAACCCGCTGAAATCTTATCGA 6 14766595 0.961214724 5 6 27 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 3L:14766563-14766601 6 4 1805 FBgn0036446 489.33 13.20333333 20.20333333 0.008174443 0.3029538 0.197987131 -3 -2 -2.5 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 3L 14766729 14766734 + 3L_14766729_14766734_+ 0.808132633 0.998698683 0.903415658 0.134750582 CG9384 FBtr0333044|FBtr0075690 14765702|14765702 14767703|14767703 3L + 14766709 14766807 3'utr CG9384 FlyBase G30302.1 ATGAATTCACCCATCATGCTTGTGTTAGTTTTATATAGCCACGTTCTTGAAGATGAAGCCATAACTACATACATAAATAAAATATGCATGAACATAAAC 38 14766725 0.993960087 8 35 425 0.951219512 1.591064607 0.219512195 0.054054054 0.146341463 37 2 0 39 3L:14766709-14766807 6 CG9384 FBtr0333044|FBtr0075690 14765702|14765702 14767703|14767703 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 14766708 14766748 3'utr CG9384 FlyBase G22919.1 TATGAATTCACCCATCATGCTTGTGTTAGTTTTATATAGCC 17 14766725 0.83073772 3 14 187 0.884615385 1.06069784 0.346153846 0.294117647 0.538461538 17 2 1 23 3L:14766708-14766748 6 24.5 1806 FBgn0036446 489.33 13.20333333 20.20333333 0.050068461 1.855592022 1.212671176 4 4 4 0.15 dme-miR-308-3p 8mer-m1 CTGTGATT 3L 14766856 14766863 + 3L_14766856_14766863_+ 0.385560496 0.385548131 0.385554313 8.77E-06 CG9384 FBtr0333044|FBtr0075690 14765702|14765702 14767703|14767703 3L + 14766816 14766875 3'utr CG9384 FlyBase G30302.2 ATTAAATAACGAAACGATTTTTAGCATTGTTGCTTTTTTACTGTGATTTGTTAATAATTT 49 14766863 0.696481717 10 47 614 0.966101695 1.755874856 0.152542373 0.163265306 0.305084746 49 2 0 57 3L:14766816-14766875 8 CG9384 FBtr0333044|FBtr0075690 14765702|14765702 14767703|14767703 CTGTGATT 8mer-m1 dme-miR-308-3p 3L + 14766830 14766874 3'utr CG9384 FlyBase G22920.1 CGATTTTTAGCATTGTTGCTTTTTTACTGTGATTTGTTAATAATT 37 14766863 0.715685298 10 37 474 1 1.681241237 0.104166667 0.216216216 0.395833333 37 0 0 48 3L:14766830-14766874 8 39 1807 FBgn0036446 489.33 13.20333333 20.20333333 0.079700815 2.953799546 1.930374526 -7 -7 -7 0.15 dme-miR-283-5p 6mer2-7 GATATT 3L 14769424 14769429 - 3L_14769424_14769429_- 0.928089068 0.998589235 0.963339151 0.049851099 mop FBtr0075700 14769339 14769665 3L - 14769422 14769460 3'utr mop FlyBase G36810.1 CGAAATCGAAACCGAATCGTGATGTGTATGGGATATTGT 15 14769436 0.678040115 2 15 79 1 1.255272505 0.111111111 0.2 0.333333333 15 0 0 18 3L:14769422-14769460 6 mop FBtr0075700 14769339 14769665 GATATT 6mer2-7 dme-miR-283-5p 3L - 14769426 14769492 3'utr mop FlyBase G27790.1 CGTCTCTTTCAACTGTTATATAAATTGTAATTCGAAATCGAAACCGAATCGTGATGTGTATGGGATA 12 14769443 0.965589508 7 11 71 0.944444444 1.230448921 0.166666667 0.333333333 0.555555556 12 1 0 17 3L:14769426-14769492 3 3.5 1808 FBgn0036448 1896.993333 38.12666667 58.29333333 0.001845025 0.091799266 0.060041171 7 14 10.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 14776668 14776673 - 3L_14776668_14776673_- 0.936968055 0.942146004 0.93955703 0.003661328 bmm FBtr0075699|FBtr0300190 14776494|14776494 14777194|14776800 3L - 14776520 14776692 3'utr bmm FlyBase G36845.1 CTTAGTACGACCAACGTATGTACCTAACTTAACTTAGCCGTATGCTGCCATTGTATCATCGTCAGTTTGTAAGCGGCAATTAGCTAATAATTGCATTCTTGTTATTAGTCACCCTCACACGACTTGTATTACATCCAAATCCCCATCTGTGTTTAGCCTAAGTTGATAATGTA 613 14776674 0.975129032 22 604 3799 0.986149584 2.250420002 0.153739612 0.146818923 0.275623269 613 7 3 712 3L:14776520-14776692 6 bmm FBtr0075699|FBtr0300190 14776494|14776494 14777194|14776800 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L - 14776617 14776696 3'utr bmm FlyBase G27811.2 TAGTCTTAGTACGACCAACGTATGTACCTAACTTAACTTAGCCGTATGCTGCCATTGTATCATCGTCAGTTTGTAAGCGG 359 14776674 0.772875575 11 352 2146 0.987522282 2.26638851 0.156862745 0.378830084 0.602495544 359 5 2 554 3L:14776617-14776696 6 412 1809 FBgn0036449 694.9966667 36.28666667 55.66 0.592808599 11.3540327 7.402084082 1 1 1 0.15 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 14800347 14800352 + 3L_14800347_14800352_+ 1 1 1 0 CG9425 FBtr0075693 14799234 14801089 3L + 14800322 14800387 3'utr CG9425 FlyBase G30348.1 ATTTAAATTTGTGCACGAGTTATTTGTTCCTTTGCCCATCCGAAATTGTCGATGCATGTGTAAATT 15 14800346 0.771435887 9 15 148 1 1.255272505 0.222222222 0.2 0.333333333 15 0 0 18 3L:14800322-14800387 6 CG9425 FBtr0075693 14799234 14801089 GTTCCT 6mer2-7 dme-miR-276a-3p 3L + 14800300 14800379 3'utr CG9425 FlyBase G22943.1 TATATATAATATGCATATAAATATTTAAATTTGTGCACGAGTTATTTGTTCCTTTGCCCATCCGAAATTGTCGATGCATG 11 14800346 0.989355944 7 11 108 1 1.176091259 0.266666667 0.272727273 0.466666667 11 0 0 15 3L:14800300-14800379 6 8 1810 FBgn0036451 1200.986667 17.94333333 27.59666667 0.00666119 0.44584804 0.289890083 1 1 1 0.15 dme-miR-1008-3p 6mer2-7 GCTGTG 3L 1491256 1491261 - 3L_1491256_1491261_- 0.999626015 0.999995879 0.999810947 0.000261559 CG12084 FBtr0332656 1490949 1491753 3L - 1491224 1491289 3'utr CG12084 FlyBase G33306.1 ACGATGCTCACTTAACCCCCCCACATTTGCTGTGCTTTCGCATCACGAACCCAAGTAGCTGCAAGT 21 1491263 0.98295709 5 21 157 1 1.361727836 0.086956522 0.095238095 0.173913043 21 0 0 23 3L:1491224-1491289 6 CG12084 FBtr0332656 1490949 1491753 GCTGTG 6mer2-7 dme-miR-1008-3p 3L - 1491214 1491289 3'utr CG12084 FlyBase G25197.1 ACGATGCTCACTTAACCCCCCCACATTTGCTGTGCTTTCGCATCACGAACCCAAGTAGCTGCAAGTTCAGGATCGG 7 1491263 0.968399461 5 7 34 1 1 0 0.285714286 0.5 7 0 0 10 3L:1491214-1491289 6 11 1811 FBgn0043458 1091.493333 38.07666667 58.14666667 0.010077936 0.288890834 0.189176794 2 2 2 0.15 dme-miR-33-5p 6mer2-7 AATGCA 3L 14991399 14991404 + 3L_14991399_14991404_+ 0.784103116 0.758919477 0.771511296 0.017807494 mnd FBtr0075626|FBtr0114529|FBtr0075627 14991215|14991215|14991215 14991667|14991667|14991667 3L + 14991256 14991581 3'utr mnd FlyBase G30373.2 TGTGGATGTATCGATCAACGCAACTATAGAAGGGAATATCTTGTAGTTAGGATAAGTCTCAATTTACCCCTAAGATAGGTTAGCAACGCGAAATTTTGAAAACCTACGCACAACATTACAAAAGTGTTATTGTAAATAACTCAAATGCATTCTGGTAGGGAAGTCCCTGCTTCAATTAATATTATTTGTTAGTCGTACTTTTAATGTATATTTCAAACCCAAAAAAAATGAGTTCCTCGTCGAAAGCAGAAGTACGCCTGTTATACAAAATGCGAACCAATTTTTACATATTATACAAGTAATTAGGAGCTTATTCAGTAAGTAAT 210 14991404 0.972122629 38 194 1265 0.933609959 1.507084478 0.232365145 0.123809524 0.236514523 210 10 6 225 3L:14991256-14991581 6 mnd FBtr0114529|FBtr0075627|FBtr0075626 14991215|14991215|14991215 14991667|14991667|14991667 AATGCA 6mer2-7 dme-miR-33-5p 3L + 14991250 14991428 3'utr mnd FlyBase G22958.1 GCCTTTTGTGGATGTATCGATCAACGCAACTATAGAAGGGAATATCTTGTAGTTAGGATAAGTCTCAATTTACCCCTAAGATAGGTTAGCAACGCGAAATTTTGAAAACCTACGCACAACATTACAAAAGTGTTATTGTAAATAACTCAAATGCATTCTGGTAGGGAAGTCCCTGCTTC 70 14991405 0.976540047 21 67 431 0.971428571 2.008600172 0.180952381 0.314285714 0.542857143 70 3 0 102 3L:14991250-14991428 6 41 1812 FBgn0002778 691.1866667 34.75 53.52333333 0.059318274 1.179856115 0.76602105 -5 -6 -5.5 0.15 dme-miR-276a-3p 7mer-m8 AGTTCCT 3L 14991486 14991492 + 3L_14991486_14991492_+ 0.622685661 0.631512744 0.627099203 0.006241632 mnd FBtr0075626|FBtr0114529|FBtr0075627 14991215|14991215|14991215 14991667|14991667|14991667 3L + 14991256 14991581 3'utr mnd FlyBase G30373.2 TGTGGATGTATCGATCAACGCAACTATAGAAGGGAATATCTTGTAGTTAGGATAAGTCTCAATTTACCCCTAAGATAGGTTAGCAACGCGAAATTTTGAAAACCTACGCACAACATTACAAAAGTGTTATTGTAAATAACTCAAATGCATTCTGGTAGGGAAGTCCCTGCTTCAATTAATATTATTTGTTAGTCGTACTTTTAATGTATATTTCAAACCCAAAAAAAATGAGTTCCTCGTCGAAAGCAGAAGTACGCCTGTTATACAAAATGCGAACCAATTTTTACATATTATACAAGTAATTAGGAGCTTATTCAGTAAGTAAT 210 14991485 0.972122629 38 194 1265 0.933609959 1.507084478 0.232365145 0.123809524 0.236514523 210 10 6 225 3L:14991256-14991581 7 mnd FBtr0114529|FBtr0075627|FBtr0075626 14991215|14991215|14991215 14991667|14991667|14991667 AGTTCCT 7mer-m8 dme-miR-276a-3p 3L + 14991470 14991564 3'utr mnd FlyBase G22959.1 AAACCCAAAAAAAATGAGTTCCTCGTCGAAAGCAGAAGTACGCCTGTTATACAAAATGCGAACCAATTTTTACATATTATACAAGTAATTAGGAG 30 14991485 0.969287592 13 29 163 0.954545455 1.62324929 0.159090909 0.3 0.522727273 30 2 0 42 3L:14991470-14991564 7 32 1813 FBgn0002778 691.1866667 34.75 53.52333333 0.046297189 0.920863309 0.597870088 1 1 1 0.15 dme-miR-1006-3p 7mer-m8 CGAATTT 3L 14991621 14991627 + 3L_14991621_14991627_+ 0.66110775 0.661609421 0.661358586 0.000354685 mnd FBtr0075626|FBtr0114529|FBtr0075627 14991215|14991215|14991215 14991667|14991667|14991667 3L + 14991593 14991645 3'utr mnd FlyBase G30374.1 ATGCAACTTTTTGCGAAATGTAAAAAATCGAATTTGTTTTGTATAAGAAAGTT 33 14991620 0.929422371 4 30 308 0.947368421 1.556302501 0.184210526 0.121212121 0.236842105 33 2 0 36 3L:14991593-14991645 7 mnd FBtr0114529|FBtr0075627|FBtr0075626 14991215|14991215|14991215 14991667|14991667|14991667 CGAATTT 7mer-m8 dme-miR-1006-3p 3L + 14991593 14991641 3'utr mnd FlyBase G22960.1 ATGCAACTTTTTGCGAAATGTAAAAAATCGAATTTGTTTTGTATAAGAA 12 14991620 0.986979778 3 11 96 1 1.230448921 0.294117647 0.25 0.470588235 12 0 0 17 3L:14991593-14991641 7 21 1814 FBgn0002778 691.1866667 34.75 53.52333333 0.030382531 0.604316547 0.392352245 1 1 1 0.15 dme-miR-263a-5p 6mer3-8 GTGCCA 3L 15001765 15001770 - 3L_15001765_15001770_- 0.946993784 0.913335509 0.930164646 0.023800012 Reck FBtr0333876|FBtr0075671 15001236|15001236 15001821|15001821 3L - 15001687 15001958 stop_codon Reck FlyBase G36876.1 CAACCAATCTAGCTCTATCCTGTTTGACAGTATCGCATCTACTAGAACCCACGCCAAATGGAGCTACATCTTATGGTCCCCACGCCATTTGGATACTCCCCTTACTTTTGTTAGTTTCTAGAGTAATCATAGCTTAAGATAGTCCTAGAAGGAGTGTGTATGATCTGACTCAATCAAGTGAATTCTTGGTGCCAATTAACCCGTTATTCTAAGGAGATGGAAAGTGCCTTCAACTGTAAGGAATTGACCCTCTGTACCATGTGATATTAGCT 499 15001773 0.998993863 52 457 3673 0.92092257 1.349471799 0.179571664 0.176352705 0.322899506 499 24 24 559 3L:15001687-15001958 6 Reck FBtr0333876|FBtr0075671 15001236|15001236 15001821|15001821 GTGCCA 6mer3-8 dme-miR-263a-5p 3L - 15001687 15001834 stop_codon Reck FlyBase G27837.1 AATCATAGCTTAAGATAGTCCTAGAAGGAGTGTGTATGATCTGACTCAATCAAGTGAATTCTTGGTGCCAATTAACCCGTTATTCTAAGGAGATGGAAAGTGCCTTCAACTGTAAGGAATTGACCCTCTGTACCATGTGATATTAGCT 350 15001773 0.781999025 34 310 2550 0.877862595 0.990659974 0.185114504 0.365714286 0.576335878 350 18 46 460 3L:15001687-15001834 6 193.5 1815 FBgn0036463 378 10.74666667 16.56333333 0.511904762 18.00558313 11.68243107 3 3 3 0.15 dme-miR-79-3p 8mer-A1 TAGCTTTA 3L 1503362 1503369 - 3L_1503362_1503369_- 0.622804816 0.62308589 0.622945353 0.000198768 cue FBtr0072706 1503224 1503826 3L - 1503313 1503407 3'utr cue FlyBase G33337.2 CGTCATGTTGAAATGAATGCAAGTCGCGCGACTGACATTAGCTTTAAAAACGGATTACGCGGCCGCAAGACCATTGCGATTGTGATGATTGCATC 780 1503370 0.786645013 13 768 4364 0.988184748 2.662757832 0.383458647 0.158974359 0.29538131 780 10 1 920 3L:1503313-1503407 8 cue FBtr0072706 1503224 1503826 TAGCTTTA 8mer-A1 dme-miR-79-3p 3L - 1503298 1503417 3'utr cue FlyBase G25215.1 ACTTTGAATACGTCATGTTGAAATGAATGCAAGTCGCGCGACTGACATTAGCTTTAAAAACGGATTACGCGGCCGCAAGACCATTGCGATTGTGATGATTGCATCCGGATCTGTTGTAAT 598 1503370 0.968722558 20 589 3253 0.988358556 2.92890769 0.339930151 0.339464883 0.54016298 598 10 0 849 3L:1503298-1503417 8 658.5 1816 FBgn0011204 1050.61 45.31 69.18333333 0.626778729 14.53321563 9.518188388 1 1 1 0.15 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3L 1503555 1503561 - 3L_1503555_1503561_- 0.794925715 0.804472352 0.799699034 0.006750536 cue FBtr0072706|FBtr0072706 1503224|1503224 1503826|1503826 3L - 1503543 1503730 3'utr cue FlyBase G33338.2 AAGCTGCTGCCCGCCCGGCCCTCGACCCCGTTAGCCGCCAAGGTGCTCGCCCAGGCAACCAGCAACTAGAAACCAATTACCAACCAGCCACAGCAATGTGCAACCAGCAACAGCAGCCTAATACTTAACACTCGCCTGGGACACTTAACACTCGCCAAACCAAACCATTTACTTAAGCCGAAGCAACA 128 1503563 0.840186522 20 119 458 0.939597315 1.544068044 0.073825503 0.140625 0.261744966 128 6 3 140 3L:1503543-1503730 7 cue FBtr0072706|FBtr0072706 1503224|1503224 1503826|1503826 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3L - 1503546 1503615 3'utr cue FlyBase G25217.1 GCCTAATACTTAACACTCGCCTGGGACACTTAACACTCGCCAAACCAAACCATTTACTTAAGCCGAAGCA 47 1503563 0.802760007 12 43 197 0.929577465 1.342422681 0.042253521 0.425531915 0.61971831 47 3 2 66 3L:1503546-1503615 7 42 1817 FBgn0011204 1050.61 45.31 69.18333333 0.039976775 0.926947694 0.607082631 2 2 2 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 1503773 1503779 - 3L_1503773_1503779_- 0.796699145 0.799014258 0.797856702 0.001637094 cue FBtr0072706|FBtr0072706|FBtr0072706 1503224|1503224|1503224 1503826|1503826|1503826 3L - 1503731 1503811 3'utr cue FlyBase G33339.1 CGGACATCCACCTGCGCCTCAAAACTGAACCTTGTGATAGTCGTCGTCGTCGAGTGCGGATTTGGTGTATTCGAGCTTGAA 607 1503780 0.795159161 16 570 4303 0.946478873 1.526339277 0.123943662 0.140032949 0.264788732 607 19 19 672 3L:1503731-1503811 7 cue FBtr0072706|FBtr0072706|FBtr0072706 1503224|1503224|1503224 1503826|1503826|1503826 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 1503745 1503867 stop_codon cue FlyBase G25219.1 AGAAGATACTCATCCACAACATGGAGGATGACCTGTACTAGGGCGCGACGGACGGACGGACATCCACCTGCGCCTCAAAACTGAACCTTGTGATAGTCGTCGTCGTCGAGTGCGGATTTGGTG 416 1503780 0.982078088 20 389 2872 0.93533123 1.411326857 0.140378549 0.360576923 0.58044164 416 19 22 593 3L:1503745-1503867 7 493 1818 FBgn0011204 1050.61 45.31 69.18333333 0.469251197 10.88060031 7.125993736 1 1 1 0.15 dme-miR-14-3p 6mer3-8 AAGACT 3L 15090878 15090883 - 3L_15090878_15090883_- 0.999488467 0.999998863 0.999743665 0.000360907 CG6945 FBtr0075657 15090821 15091353 3L - 15090868 15090924 5'utr CG6945 FlyBase G36900.1 AATATACCGATTGGATACTGATATATTCACCGAGTTTTCTTAAGACTAACTACCGAC 18 15090885 0.691128991 9 16 133 0.904761905 1.278753601 0.380952381 0.166666667 0.285714286 18 2 0 19 3L:15090868-15090924 6 CG6945 FBtr0075657 15090821 15091353 AAGACT 6mer3-8 dme-miR-14-3p 3L - 15090857 15090926 5'utr CG6945 FlyBase G27861.1 TGAATATACCGATTGGATACTGATATATTCACCGAGTTTTCTTAAGACTAACTACCGACAAGCAATAACA 7 15090885 0.979085478 6 7 53 1 1 0.3 0.142857143 0.4 7 0 0 10 3L:15090857-15090926 6 7 1819 FBgn0036476 404.2866667 17.14 26.23666667 0.017314447 0.4084014 0.266802185 2 2 2 0.15 dme-bantam-3p 8mer-A1 TGATCTCA 3L 15127543 15127550 + 3L_15127543_15127550_+ 0.631120001 0.627974253 0.629547127 0.002224346 Cep135 FBtr0333853 15127334 15128029 3L + 15127488 15127572 3'utr Cep135 FlyBase G30414.1 TGCGCGATGAGCTTCAGCAGAGCTTGGCCATTAATCAGGTCACCAACGAAACCACTGATCTCATGCTCGGGCGCTTGCACAATGA 109 15127551 0.95625757 7 107 502 0.983870968 1.785329835 0.274193548 0.128440367 0.233870968 109 1 1 122 3L:15127488-15127572 8 Cep135 FBtr0333853 15127334 15128029 TGATCTCA 8mer-A1 dme-bantam-3p 3L + 15127524 15127570 3'utr Cep135 FlyBase G22997.1 AGGTCACCAACGAAACCACTGATCTCATGCTCGGGCGCTTGCACAAT 68 15127551 0.703646431 4 67 324 0.990825688 1.73239376 0.211009174 0.411764706 0.633027523 68 0 1 108 3L:15127524-15127570 8 88 1820 FBgn0036480 383.3666667 13.55333333 20.77666667 0.229545257 6.492867683 4.235520616 -8 -8 -8 0.15 dme-bantam-3p 6mer3-8 TGATCT 3L 15131749 15131754 - 3L_15131749_15131754_- 0.970839098 0.960624581 0.96573184 0.007222742 CG12316 FBtr0075651|FBtr0075652 15131506|15131506 15131804|15131804 3L - 15131699 15131822 stop_codon CG12316 FlyBase G36906.1 TCGAAGGATTTAGTTTAGGATCTCCCCACACAGACCAGTTGTAGTTCCAGTTGCCGATCCAATCCCATTGATCTTGGCCTGCAATAGTATTTGTATTATTTTTTTGAAGAAACGTCTGTAAAAC 86 15131755 0.838501485 18 78 575 0.911764706 1.366422957 0.117647059 0.186046512 0.31372549 86 6 3 93 3L:15131699-15131822 6 CG12316 FBtr0075652|FBtr0075651 15131506|15131506 15131804|15131804 TGATCT 6mer3-8 dme-bantam-3p 3L - 15131699 15131812 stop_codon CG12316 FlyBase G27865.1 TAGTTTAGGATCTCCCCACACAGACCAGTTGTAGTTCCAGTTGCCGATCCAATCCCATTGATCTTGGCCTGCAATAGTATTTGTATTATTTTTTTGAAGAAACGTCTGTAAAAC 54 15131755 0.846206634 15 45 383 0.891566265 1.392110465 0.156626506 0.425925926 0.626506024 54 7 2 74 3L:15131699-15131812 6 46 1821 FBgn0036483 307.04 9.166666667 14.16333333 0.149817613 5.018181818 3.247823017 1 1 1 0.15 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 15154579 15154586 - 3L_15154579_15154586_- 0.629371753 0.629870389 0.629621071 0.000352563 Msh6 FBtr0075646 15154231 15154664 3L - 15154444 15154614 3'utr Msh6 FlyBase G36934.1 AAACATGTTTACTTATGATTCGCCAAGAGGCAGCTATGCTGGAATTTGATGTATACGAAGCTTTTTAAGACTTTTTCACCATTTCAGTATGCATTTTTTTTGTAGTTTTTATAAGGAATTTGAATCAAAACCTGTGCCATTCTCAACATTCTCAATTAAGCAAAATGGAAC 117 15154578 0.980341138 26 103 853 0.881118881 2.100370545 0.083916084 0.205128205 0.34965035 117 17 0 126 3L:15154444-15154614 8 Msh6 FBtr0075646 15154231 15154664 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L - 15154467 15154610 3'utr Msh6 FlyBase G27890.1 ATGTTTACTTATGATTCGCCAAGAGGCAGCTATGCTGGAATTTGATGTATACGAAGCTTTTTAAGACTTTTTCACCATTTCAGTATGCATTTTTTTTGTAGTTTTTATAAGGAATTTGAATCAAAACCTGTGCCATTCTCAACA 90 15154596 0.887134801 20 86 592 0.944444444 2.075546961 0.126984127 0.3 0.5 90 7 0 119 3L:15154467-15154610 8 52.5 1822 FBgn0036486 1407.773333 41.68666667 63.93666667 0.037292935 1.25939549 0.821125072 -8 10 1 0.15 dme-miR-282-5p 7mer-A1 GAGGCTA 3L 15154638 15154644 - 3L_15154638_15154644_- 0.818940213 0.818117844 0.818529028 0.000581525 Msh6 FBtr0075646 15154231 15154664 3L - 15154629 15154666 stop_codon Msh6 FlyBase G36935.1 AGGGTGCAGAAGCTCCAAAGTTGAGGCTACCAGACACC 46 15154645 0.722163575 2 44 143 0.945454545 1.414973348 0.109090909 0.173913043 0.309090909 46 2 1 52 3L:15154629-15154666 7 Msh6 FBtr0075646 15154231 15154664 GAGGCTA 7mer-A1 dme-miR-282-5p 3L - 15154621 15154657 3'utr Msh6 FlyBase G27891.1 AAGCTCCAAAGTTGAGGCTACCAGACACCATTTCCCA 20 15154646 0.906806879 2 20 63 1 1.568201724 0 0.55 0.756756757 20 0 0 37 3L:15154621-15154657 7 33 1823 FBgn0036486 1407.773333 41.68666667 63.93666667 0.023441274 0.791620022 0.516135759 1 2 1.5 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 3L 1522942 1522948 + 3L_1522942_1522948_+ 0.658871603 0.662661373 0.660766488 0.002679793 Psa FBtr0072700|FBtr0072697|FBtr0072701|FBtr0306557|FBtr0072702|FBtr0072699|FBtr0072698|FBtr0333395 1522918|1522918|1522918|1522918|1522918|1522918|1522918|1522918 1523380|1523380|1523380|1523380|1523380|1523380|1523380|1523380 3L + 1522905 1523042 stop_codon Psa FlyBase G27115.1 AGGGATGACCAATAAACGTTATTGCGCTCGCCAGCATACCAAAGCATTTAACAACAATCACCAGCAGTGTAACCACAGCAACAGCAACGCCAACGCAGCACCATCATCAGCACCAGTAACCCGTAACCAGGTCATCGT 35 1522941 0.961506541 9 34 124 1 1.579783597 0.131578947 0.057142857 0.131578947 35 0 0 38 3L:1522905-1523042 7 Psa FBtr0072698|FBtr0333395|FBtr0072702|FBtr0072699|FBtr0072701|FBtr0306557|FBtr0072700|FBtr0072697 1522918|1522918|1522918|1522918|1522918|1522918|1522918|1522918 1523380|1523380|1523380|1523380|1523380|1523380|1523380|1523380 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 1522918 1522958 stop_codon Psa FlyBase G20523.1 AAACGTTATTGCGCTCGCCAGCATACCAAAGCATTTAACAA 8 1522941 0.925001087 3 6 27 0.692307692 0.954242509 0 0.625 0.769230769 8 4 0 9 3L:1522918-1522958 7 11.5 1824 FBgn0261243 1862.84 60.46333333 92.53333333 0.00617337 0.190197916 0.124279539 1 1 1 0.15 dme-miR-968-5p 6mer3-8 ACTACT 3L 1523208 1523213 + 3L_1523208_1523213_+ 0.726017692 0.622710497 0.674364095 0.073049222 Psa FBtr0072700|FBtr0072697|FBtr0072701|FBtr0306557|FBtr0072702|FBtr0072699|FBtr0072698|FBtr0333395 1522918|1522918|1522918|1522918|1522918|1522918|1522918|1522918 1523380|1523380|1523380|1523380|1523380|1523380|1523380|1523380 3L + 1523114 1523222 3'utr Psa FlyBase G27116.1 GTACTCCTAAAGATGAGAGCCAAATAGGTTAGCTTTAGTCAAGGATCCACCTACAGCCACTGCTCCAACCGGGCGTGCTTACATATATCGATTGACTACTCGCCCCAGC 40 1523205 0.948908266 10 40 215 1 1.69019608 0.285714286 0.15 0.306122449 40 0 0 49 3L:1523114-1523222 6 Psa FBtr0072698|FBtr0333395|FBtr0072702|FBtr0072699|FBtr0072701|FBtr0306557|FBtr0072700|FBtr0072697 1522918|1522918|1522918|1522918|1522918|1522918|1522918|1522918 1523380|1523380|1523380|1523380|1523380|1523380|1523380|1523380 ACTACT 6mer3-8 dme-miR-968-5p 3L + 1523173 1523223 3'utr Psa FlyBase G20525.1 CTGCTCCAACCGGGCGTGCTTACATATATCGATTGACTACTCGCCCCAGCA 13 1523205 0.968175557 5 13 76 1 1.397940009 0.16 0.461538462 0.72 13 0 0 25 3L:1523173-1523223 6 17 1825 FBgn0261243 1862.84 60.46333333 92.53333333 0.009125851 0.281162137 0.183717579 3 3 3 0.15 dme-miR-14-3p 6mer2-7 AGACTG 3L 15242280 15242285 + 3L_15242280_15242285_+ 0.999794706 0.999984879 0.999889793 0.000134492 Tollo FBtr0075607 15240160 15242832 3L + 15242260 15242297 3'utr Tollo FlyBase G30437.1 TAGAAGGATTCACTTGGTTTAGACTGTAAAGAGTTAAA 15 15242278 0.683931682 5 14 114 0.944444444 1.230448921 0.166666667 0.2 0.333333333 15 1 0 17 3L:15242260-15242297 6 Tollo FBtr0075607 15240160 15242832 AGACTG 6mer2-7 dme-miR-14-3p 3L + 15242261 15242298 3'utr Tollo FlyBase G23014.1 AGAAGGATTCACTTGGTTTAGACTGTAAAGAGTTAAAT 13 15242278 0.656065455 5 12 93 0.916666667 1.342422681 0.291666667 0.615384615 0.791666667 13 2 0 22 3L:15242261-15242298 6 14 1826 FBgn0029114 1018.113333 17.04 26.18666667 0.013750925 0.821596244 0.534623218 2 2 2 0.15 dme-miR-283-5p 8mer-m1 TGATATTT 3L 15242345 15242352 + 3L_15242345_15242352_+ 0.505216519 0.459434836 0.482325677 0.032372551 Tollo FBtr0075607 15240160 15242832 3L + 15242323 15242370 3'utr Tollo FlyBase G30438.1 ACGTTTATTTGTTTAATCATTGTGATATTTTGTTTTATCAATAAGTCC 63 15242342 0.69995681 13 57 841 0.923076923 1.158362492 0.243589744 0.174603175 0.333333333 63 2 4 72 3L:15242323-15242370 8 Tollo FBtr0075607 15240160 15242832 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 15242323 15242362 3'utr Tollo FlyBase G23015.1 ACGTTTATTTGTTTAATCATTGTGATATTTTGTTTTATCA 39 15242341 0.708563098 8 37 484 0.921875 1.770852012 0.140625 0.41025641 0.640625 39 5 0 59 3L:15242323-15242362 8 51 1827 FBgn0029114 1018.113333 17.04 26.18666667 0.050092655 2.992957746 1.947556008 3 4 3.5 0.15 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 1535130 1535136 - 3L_1535130_1535136_- 0.823274475 0.823349562 0.823312019 5.31E-05 CG12091 FBtr0333400|FBtr0072831 1534927|1535010 1535595|1535595 3L - 1535077 1535180 3'utr CG12091 FlyBase G33360.1 TGGAAGCTGGATGGATGGTGGACCCGGAATGGAGCGAGTCGAGTGCAGCTATCTGACTGAGGACGGAGGATTACCCATTTACGCGGGCGAACGAACTGTCTTTA 30 1535129 0.777278922 13 24 135 0.846153846 0.916453949 0.307692308 0.266666667 0.435897436 30 3 3 33 3L:1535077-1535180 7 CG12091 FBtr0072831|FBtr0333400 1535010|1534927 1535595|1535595 GCAGCTA 7mer-A1 dme-miR-980-3p 3L - 1535035 1535182 3'utr CG12091 FlyBase G25231.1 GATGGAAGCTGGATGGATGGTGGACCCGGAATGGAGCGAGTCGAGTGCAGCTATCTGACTGAGGACGGAGGATTACCCATTTACGCGGGCGAACGAACTGTCTTTAAACAATTTTTGTCGAAATGTACTCACTGATATTTGCGACCCA 36 1535137 0.92588976 13 31 162 0.854166667 1.612783857 0.416666667 0.222222222 0.416666667 36 7 0 41 3L:1535035-1535182 7 20 1828 FBgn0035228 678.3333333 45.40666667 69.66333333 0.029484029 0.440463955 0.287095076 -7 1 -3 0.15 dme-miR-13b-2-5p 7mer-A1 TTGACGA 3L 1535458 1535464 - 3L_1535458_1535464_- 0.498515363 0.584043024 0.541279193 0.060477146 CG12091 FBtr0333400|FBtr0072831 1534927|1535010 1535595|1535595 3L - 1535415 1535624 stop_codon CG12091 FlyBase G33363.1 CCGTTGTCCTGGCCACCGTGGCGATGTGAGAGTGGTGCTCCAGCCCATCCTCCCTAGTGATTAACGTTTACTTGTAGTCCGTACGTGTTTAGTTAGCTTTAGGAGCCAGTTTCGTGGTTCTGTCTACCGTTTAAGCTGCATGTTGAGATTGAGATTGTGATTGACGAGGACGACGACCCTTTGACCCTTTGCATTGTTAGTTACATATAT 459 1535470 0.817845686 34 445 3211 0.969811321 1.932811869 0.581132075 0.139433551 0.254716981 459 11 5 514 3L:1535415-1535624 7 CG12091 FBtr0072831|FBtr0333400 1535010|1534927 1535595|1535595 TTGACGA 7mer-A1 dme-miR-13b-2-5p 3L - 1535423 1535583 3'utr CG12091 FlyBase G25234.1 AGCCCATCCTCCCTAGTGATTAACGTTTACTTGTAGTCCGTACGTGTTTAGTTAGCTTTAGGAGCCAGTTTCGTGGTTCTGTCTACCGTTTAAGCTGCATGTTGAGATTGAGATTGTGATTGACGAGGACGACGACCCTTTGACCCTTTGCATTGTTAGTT 352 1535470 0.805250796 24 351 2442 0.998123827 2.424881637 0.544090056 0.352272727 0.572232645 352 0 1 532 3L:1535423-1535583 7 209 1829 FBgn0035228 678.3333333 45.40666667 69.66333333 0.308108108 4.602848334 3.000143548 6 6 6 0.15 dme-miR-79-3p 8mer-A1 TAGCTTTA 3L 1535524 1535531 - 3L_1535524_1535531_- 0.603955889 0.617302887 0.610629388 0.009437754 CG12091 FBtr0333400|FBtr0072831 1534927|1535010 1535595|1535595 3L - 1535415 1535624 stop_codon CG12091 FlyBase G33363.1 CCGTTGTCCTGGCCACCGTGGCGATGTGAGAGTGGTGCTCCAGCCCATCCTCCCTAGTGATTAACGTTTACTTGTAGTCCGTACGTGTTTAGTTAGCTTTAGGAGCCAGTTTCGTGGTTCTGTCTACCGTTTAAGCTGCATGTTGAGATTGAGATTGTGATTGACGAGGACGACGACCCTTTGACCCTTTGCATTGTTAGTTACATATAT 459 1535532 0.817845686 34 445 3211 0.969811321 1.932811869 0.581132075 0.139433551 0.254716981 459 11 5 514 3L:1535415-1535624 8 CG12091 FBtr0072831|FBtr0333400 1535010|1534927 1535595|1535595 TAGCTTTA 8mer-A1 dme-miR-79-3p 3L - 1535423 1535583 3'utr CG12091 FlyBase G25234.1 AGCCCATCCTCCCTAGTGATTAACGTTTACTTGTAGTCCGTACGTGTTTAGTTAGCTTTAGGAGCCAGTTTCGTGGTTCTGTCTACCGTTTAAGCTGCATGTTGAGATTGAGATTGTGATTGACGAGGACGACGACCCTTTGACCCTTTGCATTGTTAGTT 352 1535532 0.805250796 24 351 2442 0.998123827 2.424881637 0.544090056 0.352272727 0.572232645 352 0 1 532 3L:1535423-1535583 8 128 1830 FBgn0035228 678.3333333 45.40666667 69.66333333 0.188697789 2.818969314 1.837408488 1 1 1 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 3L 1544622 1544629 + 3L_1544622_1544629_+ 0.643556033 0.643565062 0.643560548 6.43E-06 CG7852 FBtr0072736|FBtr0072737|FBtr0072735 1544074|1541507|1544074 1544823|1544823|1544823 3L + 1544600 1544641 3'utr CG7852 FlyBase G27133.1 AGCTTTTAGTTTAGTTGATTTTACCAAAGAATCTTTGTTTTT 20 1544621 0.838294311 4 19 209 0.954545455 1.021189299 0 0.1 0.181818182 20 0 1 21 3L:1544600-1544641 8 CG7852 FBtr0072737|FBtr0072735|FBtr0072736 1541507|1544074|1544074 1544823|1544823|1544823 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 1544612 1544634 3'utr CG7852 FlyBase G20537.1 AGTTGATTTTACCAAAGAATCTT 5 1544621 0.724904695 3 5 28 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3L:1544612-1544634 8 12 1831 FBgn0035229 480 10.39 15.81 0.025 1.154956689 0.759013283 1 1 1 0.15 dme-miR-307a-3p 6mer3-8 GGTTGT 3L 15503460 15503465 + 3L_15503460_15503465_+ 0.930770556 0.999819259 0.965294908 0.048824804 CG7272 FBtr0075548 15503417 15503769 3L + 15503413 15503479 stop_codon CG7272 FlyBase G30466.1 AAATAATTGAAATCGAACGCTTTACCTAGAAAAAAGGACAAATAATGGGTTGTTGCAACAACATTAC 34 15503435 0.942142138 13 28 157 0.860465116 1.091080469 0.162790698 0.264705882 0.418604651 34 4 2 37 3L:15503413-15503479 6 CG7272 FBtr0075548 15503417 15503769 GGTTGT 6mer3-8 dme-miR-307a-3p 3L + 15503417 15503473 stop_codon CG7272 FlyBase G23035.1 AATTGAAATCGAACGCTTTACCTAGAAAAAAGGACAAATAATGGGTTGTTGCAACAA 20 15503463 0.723834527 8 17 93 0.884615385 1.361727836 0.115384615 0.2 0.384615385 20 3 0 23 3L:15503417-15503473 6 10 1832 FBgn0036501 774.8233333 80.60666667 124.19 0.012906168 0.124059218 0.080521781 25 -3 11 0.15 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 15510691 15510696 + 3L_15510691_15510696_+ 0.999330677 0.999999999 0.999665338 0.000473267 gdl-ORF39 FBtr0091756 15509667 15510837 3L + 15510671 15510706 3'utr gdl-ORF39 FlyBase G30469.1 AAGGAGATAAAAATACAAATGTTCCTGTTGGACTTC 9 15510690 0.971506622 3 9 62 1 1.204119983 0.5625 0.444444444 0.6875 9 0 0 16 3L:15510671-15510706 6 gdl-ORF39 FBtr0091756 15509667 15510837 GTTCCT 6mer2-7 dme-miR-276a-3p 3L + 15510672 15510705 3'utr gdl-ORF39 FlyBase G23037.1 AGGAGATAAAAATACAAATGTTCCTGTTGGACTT 6 15510690 0.963257686 3 6 40 1 1.041392685 0.818181818 0.666666667 0.818181818 6 0 0 11 3L:15510672-15510705 6 7.5 1833 FBgn0028377 16.80333333 2.22 3.413333333 0.446340012 3.378378378 2.197265625 1 1 1 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 3L 15510787 15510792 + 3L_15510787_15510792_+ 0.997028755 0.982123041 0.989575898 0.010539992 gdl-ORF39 FBtr0091756 15509667 15510837 3L + 15510737 15510816 3'utr gdl-ORF39 FlyBase G30470.1 CCCGGCAAATAACAGTTAGTCCACAATCCGGAGAACACAAAAGACTGCACTTGACTTGTTCAAATTAGAATATTAAAGGC 24 15510792 0.986692301 9 22 184 0.888888889 0.903089987 0.222222222 0.125 0.222222222 24 1 2 24 3L:15510737-15510816 6 gdl-ORF39 FBtr0091756 15509667 15510837 TTGACT 6mer3-8 dme-miR-1012-3p 3L + 15510753 15510815 3'utr gdl-ORF39 FlyBase G23038.1 TAGTCCACAATCCGGAGAACACAAAAGACTGCACTTGACTTGTTCAAATTAGAATATTAAAGG 20 15510793 0.989813305 6 17 164 0.888888889 1.204119983 0.194444444 0.45 0.694444444 20 3 1 32 3L:15510753-15510815 6 20 1834 FBgn0028377 16.80333333 2.22 3.413333333 1.190240032 9.009009009 5.859375 -5 -6 -5.5 0.15 dme-miR-2b-2-5p 7mer-A1 TGAAGAA 3L 15551449 15551455 + 3L_15551449_15551455_+ 0.488284013 0.82273051 0.655507261 0.236489388 CrebA FBtr0075558|FBtr0075557 15551273|15551273 15553214|15551905 3L + 15551421 15551454 3'utr CrebA FlyBase G30489.1 GTTTCGATTTAATCAGTCTGGGAGTTTGTGAAGA 10 15551433 0.772231358 5 10 78 1 1.079181246 0.5 0.2 0.333333333 10 0 0 12 3L:15551421-15551454 6 CrebA FBtr0075557|FBtr0075558 15551273|15551273 15551905|15553214 TGAAGAA 7mer-A1 dme-miR-2b-2-5p 3L + 15551426 15551489 3'utr CrebA FlyBase G23059.1 GATTTAATCAGTCTGGGAGTTTGTGAAGAATTTATGCGACGAGGAAACTTTAATGAATTTTTTG 12 15551447 0.94822406 8 10 82 0.95 1.278753601 0.25 0.333333333 0.6 12 1 0 19 3L:15551426-15551489 7 6 1835 FBgn0004396 2312.63 76.99666667 118.8566667 0.002594449 0.077925451 0.050480971 16 2 9 0.15 dme-bantam-3p 6mer3-8 TGATCT 3L 15551698 15551703 + 3L_15551698_15551703_+ 0.853781884 0.685298862 0.769540373 0.119135472 CrebA FBtr0075558|FBtr0075557 15551273|15551273 15553214|15551905 3L + 15551556 15551744 3'utr CrebA FlyBase G30490.2 AATAAATATTCCACAGGGCCGAGATGACCAGAATGCCCATAACTAATATCGTATAAATAATATGTGTATGTAATCCTAGCTACTTGTAGGGCCTATATTATAAAGCTATGTATATTAGTCATGCATTCCTGTTATATAAACTTGATCTAGCTTAGGCAAATGACCAGCTGCAGCAACAACCACAATTAC 308 15551698 0.952304315 31 289 2365 0.941340782 1.92556991 0.097765363 0.149350649 0.268156425 308 18 3 337 3L:15551556-15551744 6 CrebA FBtr0075557|FBtr0075558 15551273|15551273 15551905|15553214 TGATCT 6mer3-8 dme-bantam-3p 3L + 15551617 15551744 3'utr CrebA FlyBase G23061.1 ATGTGTATGTAATCCTAGCTACTTGTAGGGCCTATATTATAAAGCTATGTATATTAGTCATGCATTCCTGTTATATAAACTTGATCTAGCTTAGGCAAATGACCAGCTGCAGCAACAACCACAATTAC 207 15551697 0.736924534 24 189 1582 0.910596026 1.837272703 0.119205298 0.352657005 0.556291391 207 24 3 275 3L:15551617-15551744 6 197.5 1836 FBgn0004396 2312.63 76.99666667 118.8566667 0.085400605 2.565046106 1.661665311 0 1 0.5 0.15 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 15552118 15552123 + 3L_15552118_15552123_+ 0.987704838 0.998377358 0.993041098 0.007546668 CrebA FBtr0075558 15551273 15553214 3L + 15552057 15552134 3'utr CrebA FlyBase G30493.2 TGAATGAATTAACGAAAGACTCCCGGAGCTCAATCTCTGTGCTGTCTTTGGCATGACTATTGTTCCTTTAAACGATAT 37 15552116 0.770716109 14 32 288 0.895833333 1.156347201 0.1875 0.27027027 0.4375 37 3 2 43 3L:15552057-15552134 6 CrebA FBtr0075558 15551273 15553214 GTTCCT 6mer2-7 dme-miR-276a-3p 3L + 15552072 15552141 3'utr CrebA FlyBase G23064.1 AAGACTCCCGGAGCTCAATCTCTGTGCTGTCTTTGGCATGACTATTGTTCCTTTAAACGATATTTCTCAA 28 15552117 0.713180509 8 27 242 0.956521739 1.643452676 0.304347826 0.428571429 0.652173913 28 2 0 44 3L:15552072-15552141 6 20 1837 FBgn0004396 2312.63 76.99666667 118.8566667 0.008648162 0.259751504 0.168269905 2 1 1.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3L 15552667 15552672 + 3L_15552667_15552672_+ 0.99997284 0.999993977 0.999983408 1.50E-05 CrebA FBtr0075558 15551273 15553214 3L + 15552642 15552765 3'utr CrebA FlyBase G30495.1 TTTCGCAGCGTTCTAAATGAGTCATTCTAGTTTTTATTAGTTGAATTTATAAACACAAAATTACTTAACGGAAATTTCAAGCGTAACCCGTTGATTTCCTATCAACTCGATAATATGTATCTAT 99 15552666 0.909863664 15 96 907 0.965517241 2.049218023 0.120689655 0.151515152 0.275862069 99 4 0 112 3L:15552642-15552765 6 CrebA FBtr0075558 15551273 15553214 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 15552637 15552870 3'utr CrebA FlyBase G23067.1 ATTCTTTTCGCAGCGTTCTAAATGAGTCATTCTAGTTTTTATTAGTTGAATTTATAAACACAAAATTACTTAACGGAAATTTCAAGCGTAACCCGTTGATTTCCTATCAACTCGATAATATGTATCTATAAAATATAATTTAGCTATTTCTACGTATGTCTGTGCATGTGTGTATAAATCAAGCGGGCGAAGTTGTGCAATTGTTAGAAAATTTTTAAAAGAAAGATATTTAGT 60 15552666 0.988255138 17 52 472 0.873563218 1.579783597 0.310344828 0.333333333 0.540229885 60 10 1 76 3L:15552637-15552870 6 43 1838 FBgn0004396 2312.63 76.99666667 118.8566667 0.018593549 0.558465734 0.361780296 1 1 1 0.15 dme-miR-92b-3p 8mer-m1 GTGCAATT 3L 15552831 15552838 + 3L_15552831_15552838_+ 0.596667978 0.549101159 0.572884569 0.033634807 CrebA FBtr0075558 15551273 15553214 3L + 15552773 15552847 3'utr CrebA FlyBase G30496.1 AATTTAGCTATTTCTACGTATGTCTGTGCATGTGTGTATAAATCAAGCGGGCGAAGTTGTGCAATTGTTAGAAAA 19 15552830 0.736639603 10 19 156 1 1.342422681 0.181818182 0.105263158 0.227272727 19 0 0 22 3L:15552773-15552847 8 CrebA FBtr0075558 15551273 15553214 GTGCAATT 8mer-m1 dme-miR-92b-3p 3L + 15552637 15552870 3'utr CrebA FlyBase G23067.1 ATTCTTTTCGCAGCGTTCTAAATGAGTCATTCTAGTTTTTATTAGTTGAATTTATAAACACAAAATTACTTAACGGAAATTTCAAGCGTAACCCGTTGATTTCCTATCAACTCGATAATATGTATCTATAAAATATAATTTAGCTATTTCTACGTATGTCTGTGCATGTGTGTATAAATCAAGCGGGCGAAGTTGTGCAATTGTTAGAAAATTTTTAAAAGAAAGATATTTAGT 60 15552830 0.988255138 17 52 472 0.873563218 1.579783597 0.310344828 0.333333333 0.540229885 60 10 1 76 3L:15552637-15552870 8 11 1839 FBgn0004396 2312.63 76.99666667 118.8566667 0.004756489 0.142863327 0.092548448 1 1 1 0.15 dme-miR-92b-3p 7mer-m8 GTGCAAT 3L 15552915 15552921 + 3L_15552915_15552921_+ 0.658991194 0.656595083 0.657793139 0.001694299 CrebA FBtr0075558 15551273 15553214 3L + 15552884 15552929 3'utr CrebA FlyBase G30497.1 TCAGAAATCGATGTTGAAAAACAAAACGCTCGTGCAATGACAAACA 9 15552920 0.994317008 3 9 30 1 0.954242509 0.222222222 0 0 9 0 0 9 3L:15552884-15552929 7 CrebA FBtr0075558 15551273 15553214 GTGCAAT 7mer-m8 dme-miR-92b-3p 3L + 15552886 15553030 3'utr CrebA FlyBase G23068.1 AGAAATCGATGTTGAAAAACAAAACGCTCGTGCAATGACAAACAAAATTTTATTAATAAAGCGTTAAACAAACAAATTAAAGACAACATGAAATATACATTATGATATATTTATATATACAAGTATGAATAATGTACGACTATTT 16 15552920 0.984123635 11 15 76 0.961538462 1.397940009 0.230769231 0.4375 0.653846154 16 1 0 25 3L:15552886-15553030 7 6 1840 FBgn0004396 2312.63 76.99666667 118.8566667 0.002594449 0.077925451 0.050480971 -5 -5 -5 0.15 dme-miR-92b-3p 8mer-m1 GTGCAATT 3L 15553173 15553180 + 3L_15553173_15553180_+ 0.546999339 0.554521797 0.550760568 0.005319211 CrebA FBtr0075558 15551273 15553214 3L + 15553129 15553193 3'utr CrebA FlyBase G30499.1 GTAAAACTTTTATGATTGGTTGCTGTAATTTGGCAAAAGTAAAAGTGCAATTCCAAATAAAATTC 11 15553179 0.965474209 3 9 53 0.923076923 1.079181246 0.230769231 0.2 0.384615385 10 1 0 12 3L:15553129-15553193 8 CrebA FBtr0075558 15551273 15553214 GTGCAATT 8mer-m1 dme-miR-92b-3p 3L + 15553169 15553199 3'utr CrebA FlyBase G23069.2 AAAAGTGCAATTCCAAATAAAATTCAAACAA 8 15553179 0.766985485 2 6 31 0.777777778 0.84509804 0.222222222 0.125 0.222222222 8 2 0 7 3L:15553169-15553199 8 7.5 1841 FBgn0004396 2312.63 76.99666667 118.8566667 0.003243061 0.097406814 0.063101214 -6 -6 -6 0.15 dme-miR-970-3p 7mer-A1 CTTATGA 3L 1555544 1555550 - 3L_1555544_1555550_- 0.823281539 0.823329379 0.823305459 3.39E-05 CG12099 FBtr0072829|FBtr0072828 1555361|1555361 1555568|1555568 3L - 1555526 1555569 stop_codon CG12099 FlyBase G33371.1 AAGAGCTAGATGATGATCGCTTATGAAGTTACAAGATTTATTGT 10 1555556 0.972331617 6 10 61 1 1.176091259 0.466666667 0.4 0.6 10 0 0 15 3L:1555526-1555569 7 CG12099 FBtr0072828|FBtr0072829 1555361|1555361 1555568|1555568 CTTATGA 7mer-A1 dme-miR-970-3p 3L - 1555529 1555568 3'utr CG12099 FlyBase G25241.1 AGAGCTAGATGATGATCGCTTATGAAGTTACAAGATTTAT 6 1555548 0.950875887 4 6 39 1 1.079181246 0.166666667 0.5 0.75 6 0 0 12 3L:1555529-1555568 7 8 1842 FBgn0035232 2030.816667 84.03 129.1233333 0.003939302 0.095204094 0.061956269 6 -2 2 0.15 dme-miR-184-5p 6mer3-8 TGATAA 3L 15560771 15560776 - 3L_15560771_15560776_- 0.472295654 0.598998895 0.535647274 0.089592692 CG7739 FBtr0075596 15560724 15561085 3L - 15560749 15560803 3'utr CG7739 FlyBase G36968.1 TATATTTGTAATATGGTTTAAGAAATGTGATAATATAAAAAAGATAAAAAATAAT 34 15560787 0.709222123 7 32 252 0.951219512 1.591064607 0.170731707 0.117647059 0.268292683 34 2 0 39 3L:15560749-15560803 6 CG7739 FBtr0075596 15560724 15561085 TGATAA 6mer3-8 dme-miR-184-5p 3L - 15560757 15560809 3'utr CG7739 FlyBase G27913.1 ATAATTTATATTTGTAATATGGTTTAAGAAATGTGATAATATAAAAAAGATAA 31 15560787 0.983927689 8 28 220 0.93877551 1.662757832 0.224489796 0.451612903 0.653061224 31 3 0 46 3L:15560757-15560809 6 30.5 1843 FBgn0036509 636.82 33.70333333 51.37 0.047894224 0.904955 0.59373175 11 11 11 0.15 dme-miR-2a-2-5p 7mer-m8 TGATGAG 3L 15560836 15560842 + 3L_15560836_15560842_+ 0.643974879 0.651383261 0.64767907 0.00523853 AGO2 FBtr0075560|FBtr0331933|FBtr0075559 15560730|15560730|15560730 15561042|15561042|15561042 3L + 15560797 15560877 3'utr AGO2 FlyBase G30521.1 AAATATAAATTATGTAAAGGAGCATCTCTATTGATTCCATGATGAGCTATGATTTTAAAAGCCGCCTTGAGATGGTCCGCC 22 15560807 0.786331365 12 20 141 0.961538462 1.397940009 0.192307692 0.136363636 0.269230769 22 1 0 25 3L:15560797-15560877 7 AGO2 FBtr0075560|FBtr0331933|FBtr0075559 15560730|15560730|15560730 15561042|15561042|15561042 TGATGAG 7mer-m8 dme-miR-2a-2-5p 3L + 15560798 15560844 3'utr AGO2 FlyBase G23088.1 AATATAAATTATGTAAAGGAGCATCTCTATTGATTCCATGATGAGCT 13 15560807 0.877901483 6 10 92 0.764705882 1.113943352 0.176470588 0.307692308 0.470588235 13 4 0 13 3L:15560798-15560844 7 8.5 1844 FBgn0087035 9002.526667 265.6766667 406.73 0.000944179 0.031993777 0.020898385 29 29 29 0.15 dme-miR-14-3p 6mer3-8 AAGACT 3L 15603042 15603047 + 3L_15603042_15603047_+ 0.999816221 0.998798794 0.999307508 0.00071941 RhoGAP71E FBtr0075568|FBtr0075567 15602556|15602699 15603119|15603119 3L + 15603027 15603054 3'utr RhoGAP71E FlyBase G30598.1 AATCAACAACACATTAAGACTTAAGAAT 7 15603041 0.960273592 2 5 24 0.625 0.698970004 0.5 0.142857143 0.25 7 3 0 5 3L:15603027-15603054 6 RhoGAP71E FBtr0075568|FBtr0075567 15602556|15602699 15603119|15603119 AAGACT 6mer3-8 dme-miR-14-3p 3L + 15603022 15603061 3'utr RhoGAP71E FlyBase G23138.1 ACAACAATCAACAACACATTAAGACTTAAGAATTTGAAGA 9 15603041 0.707234511 3 8 32 1 1.041392685 0.090909091 0.25 0.454545455 8 0 0 11 3L:15603022-15603061 6 6.5 1845 FBgn0036518 3855.043333 129.2366667 200.3833333 0.001686103 0.050295324 0.032437827 1 1 1 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3L 15607582 15607588 + 3L_15607582_15607588_+ 0.439843873 0.51691226 0.478378067 0.054495588 RhoGAP71E FBtr0290065|FBtr0332093|FBtr0075569|FBtr0332092|FBtr0303510 15606679|15607124|15607124|15604842|15606675 15609125|15609125|15609125|15609125|15609125 3L + 15607541 15607594 3'utr RhoGAP71E FlyBase G30609.1 TGCAACAAATTGCCAAATTTTATTCAGCATTCATTTCGTTGTGTGATTTAGGTT 7 15607588 0.991085839 3 7 70 1 1.041392685 0.090909091 0.571428571 0.727272727 7 0 0 11 3L:15607541-15607594 7 RhoGAP71E FBtr0332093|FBtr0290065|FBtr0303510|FBtr0332092|FBtr0075569 15607124|15606679|15606675|15604842|15607124 15609125|15609125|15609125|15609125|15609125 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 15607566 15607595 3'utr RhoGAP71E FlyBase G23148.1 AGCATTCATTTCGTTGTGTGATTTAGGTTG 7 15607588 0.766555008 2 7 77 1 1.113943352 0.384615385 0.571428571 0.769230769 7 0 0 13 3L:15607566-15607595 7 6 1846 FBgn0036518 3855.043333 129.2366667 200.3833333 0.001556403 0.046426453 0.02994261 -6 -6 -6 0.15 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3L 15608457 15608462 + 3L_15608457_15608462_+ 0.888910822 0.928762995 0.908836909 0.028179761 RhoGAP71E FBtr0290065|FBtr0332093|FBtr0075569|FBtr0332092|FBtr0303510 15606679|15607124|15607124|15604842|15606675 15609125|15609125|15609125|15609125|15609125 3L + 15608414 15608474 3'utr RhoGAP71E FlyBase G30613.1 TCTTTGCGAAGTTAGAGAAAGAAACAATTTCCTCCTCGCTGTGTTTGACCGACCACATTTG 10 15608458 0.981315789 7 10 70 1 1.204119983 0.125 0.3 0.5625 10 0 0 16 3L:15608414-15608474 6 RhoGAP71E FBtr0332093|FBtr0290065|FBtr0303510|FBtr0332092|FBtr0075569 15607124|15606679|15606675|15604842|15607124 15609125|15609125|15609125|15609125|15609125 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3L + 15608439 15608466 3'utr RhoGAP71E FlyBase G23150.1 AATTTCCTCCTCGCTGTGTTTGACCGAC 5 15608458 0.799343531 3 5 45 1 1 0.3 0.8 0.9 5 0 0 10 3L:15608439-15608466 6 6.5 1847 FBgn0036518 3855.043333 129.2366667 200.3833333 0.001686103 0.050295324 0.032437827 -1 -1 -1 0.15 dme-miR-33-5p 7mer-A1 AATGCAA 3L 15608650 15608656 + 3L_15608650_15608656_+ 0.55594707 0.555446924 0.555696997 0.000353695 RhoGAP71E FBtr0290065|FBtr0332093|FBtr0075569|FBtr0332092|FBtr0303510 15606679|15607124|15607124|15604842|15606675 15609125|15609125|15609125|15609125|15609125 3L + 15608614 15608720 3'utr RhoGAP71E FlyBase G30615.1 AAAGCTCTGAATGTTGCCCAGAATTTAGGAATGAGAAATGCAAGAAACACCAATTTGTTGATTAGCAAAGCAAACAAAAAGAAGGTTAATTTTATCGACATCATTTT 242 15608652 0.993931616 7 240 394 0.996336996 2.434568904 0.025641026 0.119834711 0.21978022 242 1 0 272 3L:15608614-15608720 7 RhoGAP71E FBtr0332093|FBtr0290065|FBtr0303510|FBtr0332092|FBtr0075569 15607124|15606679|15606675|15604842|15607124 15609125|15609125|15609125|15609125|15609125 AATGCAA 7mer-A1 dme-miR-33-5p 3L + 15608614 15608672 3'utr RhoGAP71E FlyBase G23152.1 AAAGCTCTGAATGTTGCCCAGAATTTAGGAATGAGAAATGCAAGAAACACCAATTTGTT 155 15608652 0.997891332 2 155 252 1 2.365487985 0.012931034 0.348387097 0.564655172 155 0 0 232 3L:15608614-15608672 7 194.5 1848 FBgn0036518 3855.043333 129.2366667 200.3833333 0.050453389 1.504990844 0.970639607 -2 -2 -2 0.15 dme-miR-252-5p 6mer3-8 GTACTT 3L 15608796 15608801 - 3L_15608796_15608801_- 0.997084158 0.98345173 0.990267944 0.009639633 CG7650 FBtr0075591 15608705 15609453 3L - 15608739 15608905 3'utr CG7650 FlyBase G36986.1 TGGAACAGATCCTGCTCACTAAATATAGCGTATATCTATAACGATTCTGTCATCATTTACAACACGATTTATATTTATGTAATAGTATTTAGTGGCTAATGAATGTACTTCACTCGAACTCGTACTCCGTAAGATTTATACAATTATATATTTTATAGCTTATAGCC 66 15608802 0.9856153 18 61 498 0.942528736 1.913813852 0.137931034 0.212121212 0.402298851 66 5 0 82 3L:15608739-15608905 6 CG7650 FBtr0075591 15608705 15609453 GTACTT 6mer3-8 dme-miR-252-5p 3L - 15608772 15608848 3'utr CG7650 FlyBase G27926.1 TACAACACGATTTATATTTATGTAATAGTATTTAGTGGCTAATGAATGTACTTCACTCGAACTCGTACTCCGTAAGA 41 15608802 0.983139447 6 38 297 0.967741935 1.77815125 0.14516129 0.317073171 0.548387097 41 2 0 60 3L:15608772-15608848 6 43.5 1849 FBgn0036519 328.6966667 23.90333333 36.63666667 0.132340861 1.81982987 1.187335092 1 1 1 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 15609176 15609182 - 3L_15609176_15609182_- 0.661539714 0.661555783 0.661547748 1.14E-05 CG7650 FBtr0075591 15608705 15609453 3L - 15609136 15609261 3'utr CG7650 FlyBase G36989.1 ACACGACTTCTTGGAATCTCCGAGTTACTTGTCAGTTTAAGCCAGGGCTTTAGAATTATACGCAAATTTTGACCAAATATGTGTTCGTAAGATTAGCATTTAAGAGAACTTAAGCCCGCCCTCCGT 81 15609182 0.876618309 18 75 704 0.930693069 1.672097858 0.138613861 0.209876543 0.366336634 81 6 1 94 3L:15609136-15609261 7 CG7650 FBtr0075591 15608705 15609453 TGTGTTC 7mer-m8 dme-miR-317-3p 3L - 15609137 15609288 3'utr CG7650 FlyBase G27928.1 TATAATTTGTATCAACAAAAGAAACTAACACGACTTCTTGGAATCTCCGAGTTACTTGTCAGTTTAAGCCAGGGCTTTAGAATTATACGCAAATTTTGACCAAATATGTGTTCGTAAGATTAGCATTTAAGAGAACTTAAGCCCGCCCTCCG 59 15609182 0.987765252 21 53 469 0.926315789 1.944482672 0.105263158 0.474576271 0.673684211 59 7 0 88 3L:15609137-15609288 7 42 1850 FBgn0036519 328.6966667 23.90333333 36.63666667 0.127777383 1.757077116 1.146392503 0 0 0 0.15 dme-miR-252-5p 6mer3-8 GTACTT 3L 15623068 15623073 + 3L_15623068_15623073_+ 0.914958837 0.890681356 0.902820097 0.017166714 CG7372 FBtr0075570 15623010 15624130 3L + 15622976 15623095 stop_codon CG7372 FlyBase G30623.1 TACTTCACTGTCGTGGGTCAGCAGGCGGAAATTTAAAGACTTAAGTTCAGGGTCAGCAACACTTCTTACTCATTACATTTTAAGATGCCACTGTACTTGGAAATGATGGAGACATTTCCC 43 15623067 0.971179522 11 41 236 0.964285714 1.431363764 0.125 0.255813953 0.428571429 43 1 1 54 3L:15622976-15623095 6 CG7372 FBtr0075570 15623010 15624130 GTACTT 6mer3-8 dme-miR-252-5p 3L + 15622995 15623096 stop_codon CG7372 FlyBase G23159.1 AGCAGGCGGAAATTTAAAGACTTAAGTTCAGGGTCAGCAACACTTCTTACTCATTACATTTTAAGATGCCACTGTACTTGGAAATGATGGAGACATTTCCCT 33 15623067 0.976130648 10 32 202 0.97826087 1.653212514 0.304347826 0.272727273 0.47826087 33 1 0 45 3L:15622995-15623096 6 21 1851 FBgn0036522 715.7133333 20.76333333 31.90666667 0.029341356 1.011398298 0.658169662 1 1 1 0.15 dme-miR-8-3p 6mer2-7 AGTATT 3L 15623161 15623166 + 3L_15623161_15623166_+ 0.999722431 0.799060763 0.899391597 0.141889178 CG7372 FBtr0075570 15623010 15624130 3L + 15623124 15623172 3'utr CG7372 FlyBase G30624.1 TTTTTCGATTTAAAATGCAATCTTGCAGCAGGGATCAAGTATTTTCTAT 13 15623167 0.651479357 6 12 94 0.933333333 1.146128036 0.2 0.153846154 0.266666667 13 1 0 14 3L:15623124-15623172 6 CG7372 FBtr0075570 15623010 15624130 AGTATT 6mer2-7 dme-miR-8-3p 3L + 15623124 15623171 3'utr CG7372 FlyBase G23160.1 TTTTTCGATTTAAAATGCAATCTTGCAGCAGGGATCAAGTATTTTCTA 8 15623167 0.979456994 3 8 54 1 1.041392685 0.363636364 0.375 0.545454545 8 0 0 11 3L:15623124-15623171 6 7 1852 FBgn0036522 715.7133333 20.76333333 31.90666667 0.009780452 0.337132766 0.219389887 -6 -6 -6 0.15 dme-miR-968-5p 7mer-m8 ACTACTT 3L 15623272 15623278 + 3L_15623272_15623278_+ 0.273232087 0.334238872 0.30373548 0.043138322 CG7372 FBtr0075570 15623010 15624130 3L + 15623194 15623334 3'utr CG7372 FlyBase G30625.1 GATCTAATTTTGAGGATACGGTTAGCCGAGAATTATTCAACGTTGTGAAGGACATAAAGCCGACAAGAACAAGAAAAGACTACTTTATAAAAGAAATAATGATATTTGATATGAAGAAATCAAGCAAGAGACTGCAATGAG 25 15623277 0.989834989 10 23 108 0.935483871 1.462397998 0.387096774 0.2 0.35483871 25 2 0 29 3L:15623194-15623334 7 CG7372 FBtr0075570 15623010 15624130 ACTACTT 7mer-m8 dme-miR-968-5p 3L + 15623249 15623334 3'utr CG7372 FlyBase G23161.2 AAAGCCGACAAGAACAAGAAAAGACTACTTTATAAAAGAAATAATGATATTTGATATGAAGAAATCAAGCAAGAGACTGCAATGAG 17 15623277 0.951685341 5 13 45 0.869565217 1.301029996 0.217391304 0.294117647 0.47826087 17 3 0 20 3L:15623249-15623334 7 8 1853 FBgn0036522 715.7133333 20.76333333 31.90666667 0.01117766 0.38529459 0.2507313 -5 -5 -5 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT 3L 15624067 15624073 + 3L_15624067_15624073_+ 0.658116281 0.658402665 0.658259473 0.000202515 CG7372 FBtr0075570 15623010 15624130 3L + 15624025 15624104 3'utr CG7372 FlyBase G30630.1 TTTCCTACATACACTGAACGCATTTTTGTAAATTGAATTTGTGGCAGCTTCTCTCATTCTGTAGCATCTAAGAGAGTCCG 89 15624066 0.988220883 13 81 741 0.935185185 1.305351369 0.046296296 0.179775281 0.324074074 89 3 4 101 3L:15624025-15624104 7 CG7372 FBtr0075570 15623010 15624130 GGCAGCT 7mer-m8 dme-miR-980-3p 3L + 15624026 15624107 3'utr CG7372 FlyBase G23165.1 TTCCTACATACACTGAACGCATTTTTGTAAATTGAATTTGTGGCAGCTTCTCTCATTCTGTAGCATCTAAGAGAGTCCGATG 63 15624066 0.986406259 14 61 518 0.954545455 1.322219295 0.056818182 0.253968254 0.465909091 63 1 3 84 3L:15624026-15624107 7 70 1854 FBgn0036522 715.7133333 20.76333333 31.90666667 0.097804521 3.371327661 2.193898872 1 1 1 0.15 dme-miR-252-5p 7mer-m8 GTACTTA 3L 1574136 1574142 + 3L_1574136_1574142_+ 0.582733605 0.569062631 0.575898118 0.009666857 CG12004 FBtr0072746|FBtr0072745 1574027|1574027 1574732|1574732 3L + 1574075 1574148 3'utr CG12004 FlyBase G27159.1 AATTGCAATCACAATTCCACATTTCCGAGCGGGACGCGATCCGAAAGCGAAGCAAACAAGTGTACTTATAGCCC 38 1574135 0.955006835 6 37 155 0.980392157 1.698970004 0.176470588 0.263157895 0.450980392 38 1 0 50 3L:1574075-1574148 7 CG12004 FBtr0072745|FBtr0072746 1574027|1574027 1574732|1574732 GTACTTA 7mer-m8 dme-miR-252-5p 3L + 1574091 1574148 3'utr CG12004 FlyBase G20557.1 CCACATTTCCGAGCGGGACGCGATCCGAAAGCGAAGCAAACAAGTGTACTTATAGCCC 13 1574135 0.957730548 2 12 52 0.882352941 0.698970004 0.117647059 0.307692308 0.470588235 13 0 2 15 3L:1574091-1574148 7 20.5 1855 FBgn0035236 1184.423333 63.35333333 97.16 0.017308001 0.323582027 0.210992178 1 1 1 0.15 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 3L 1574233 1574238 + 3L_1574233_1574238_+ 0.946497037 0.963485764 0.9549914 0.012012896 CG12004 FBtr0072746|FBtr0072746|FBtr0072745|FBtr0072745 1574027|1574027|1574027|1574027 1574732|1574732|1574732|1574732 3L + 1574203 1574290 3'utr CG12004 FlyBase G27160.1 AGAGGAAGATACGTACTAGGCCTAGTTACTTACTTACTCACTCCACAAAACGCTGAAAGCTGAACAGAAATTAACTTAGCCAGTCCAT 21 1574237 0.989704286 8 16 154 0.84 1.021189299 0 0.142857143 0.28 21 3 1 21 3L:1574203-1574290 6 CG12004 FBtr0072745|FBtr0072745|FBtr0072746|FBtr0072746 1574027|1574027|1574027|1574027 1574732|1574732|1574732|1574732 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 3L + 1574209 1574249 3'utr CG12004 FlyBase G20558.1 AGATACGTACTAGGCCTAGTTACTTACTTACTCACTCCACA 16 1574236 0.707351064 5 15 125 0.931034483 1.431363764 0 0.5 0.724137931 16 2 0 27 3L:1574209-1574249 6 16.5 1856 FBgn0035236 1184.423333 63.35333333 97.16 0.01393083 0.26044407 0.169822972 -4 -3 -3.5 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 3L 1574324 1574329 + 3L_1574324_1574329_+ 0.999989674 1 0.999994837 7.28E-06 CG12004 FBtr0072746|FBtr0072745 1574027|1574027 1574732|1574732 3L + 1574311 1574418 3'utr CG12004 FlyBase G27161.1 TTGCCTCTGCGTCTGTGTTTCTGTATTTCCTACGTTTACACTCTACACCTAAACTTAAGCGTTTTTTAAAACAACTTATTTAGACGTTAGCTATGTACGAAACGAACT 24 1574324 0.963673178 12 23 184 0.962962963 1.414973348 0.259259259 0.125 0.222222222 24 1 0 26 3L:1574311-1574418 6 CG12004 FBtr0072745|FBtr0072746 1574027|1574027 1574732|1574732 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 1574308 1574362 3'utr CG12004 FlyBase G20560.1 GAGTTGCCTCTGCGTCTGTGTTTCTGTATTTCCTACGTTTACACTCTACACCTAA 13 1574328 0.991571634 9 12 132 1 1.322219295 0.095238095 0.538461538 0.714285714 13 0 0 21 3L:1574308-1574362 6 9.5 1857 FBgn0035236 1184.423333 63.35333333 97.16 0.008020781 0.149952647 0.097776863 0 -4 -2 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 1574571 1574576 + 3L_1574571_1574576_+ 0.680874253 0.684018375 0.682446314 0.002223214 CG12004 FBtr0072746|FBtr0072745 1574027|1574027 1574732|1574732 3L + 1574548 1574594 3'utr CG12004 FlyBase G27162.2 GTGTTTCCGTTTCGCTCAAAGATACCAAAAACGAAGTTTTTCCTTCT 61 1574570 0.991018113 2 59 247 0.971830986 1.838849091 0.338028169 0.131147541 0.253521127 61 2 0 69 3L:1574548-1574594 6 CG12004 FBtr0072745|FBtr0072746 1574027|1574027 1574732|1574732 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 1574451 1574594 3'utr CG12004 FlyBase G20561.1 AAAGATTTTATTATACTGTATGCAACAATGGCAGTCGCTGAACAGGATTCCCCATTCAAGCGATCTTCAAGCTAGTTTCCCCTCAGCATTTATTTACGTGTTTCCGTTTCGCTCAAAGATACCAAAAACGAAGTTTTTCCTTCT 54 1574570 0.992811199 11 54 251 1 1.86332286 0.260273973 0.259259259 0.452054795 54 0 0 73 3L:1574451-1574594 6 48 1858 FBgn0035236 1184.423333 63.35333333 97.16 0.040526051 0.757655477 0.494030465 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 1574627 1574633 + 3L_1574627_1574633_+ 0.789170877 0.780068367 0.784619622 0.006436439 CG12004 FBtr0072746|FBtr0072746|FBtr0072746|FBtr0072745|FBtr0072745|FBtr0072745 1574027|1574027|1574027|1574027|1574027|1574027 1574732|1574732|1574732|1574732|1574732|1574732 3L + 1574614 1574645 3'utr CG12004 FlyBase G27163.1 TTGACCACCCTTTTGTGATAAGCTCTCGTCGT 94 1574625 0.710938974 4 87 718 0.941176471 1.204119983 0.235294118 0.234042553 0.394957983 94 1 6 112 3L:1574614-1574645 7 CG12004 FBtr0072745|FBtr0072745|FBtr0072745|FBtr0072746|FBtr0072746|FBtr0072746 1574027|1574027|1574027|1574027|1574027|1574027 1574732|1574732|1574732|1574732|1574732|1574732 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 1574602 1574645 3'utr CG12004 FlyBase G20562.1 TGATTTCCCCTTTTGACCACCCTTTTGTGATAAGCTCTCGTCGT 51 1574625 0.738337802 7 49 382 0.972222222 1.544068044 0.25 0.333333333 0.527777778 51 1 1 70 3L:1574602-1574645 7 72 1859 FBgn0035236 1184.423333 63.35333333 97.16 0.060789076 1.136483216 0.741045698 2 2 2 0.15 dme-bantam-3p 7mer-m8 TGATCTC 3L 15810495 15810501 - 3L_15810495_15810501_- 0.656240438 0.644962959 0.650601699 0.007974326 fwe FBtr0075542|FBtr0075541|FBtr0075543 15810079|15810079|15810079 15810703|15812758|15812207 3L - 15810450 15810515 3'utr fwe FlyBase G36998.1 AATCCGATTAGCTCTGATCTCTTTCTAGAGCAATCCAAATTACTCGATCAGAAAGAAGCCACCCAA 94 15810494 0.986133988 7 88 742 0.941176471 1.447158031 0.075630252 0.212765957 0.378151261 94 4 3 112 3L:15810450-15810515 7 fwe FBtr0075541|FBtr0075543|FBtr0075542 15810079|15810079|15810079 15812758|15812207|15810703 TGATCTC 7mer-m8 dme-bantam-3p 3L - 15810480 15810518 3'utr fwe FlyBase G27938.1 TTAAATCCGATTAGCTCTGATCTCTTTCTAGAGCAATCC 47 15810494 0.707231811 4 47 361 1 1.826074803 0.029850746 0.361702128 0.552238806 47 0 0 67 3L:15810480-15810518 7 70 1860 FBgn0261722 816.3866667 52.16 79.50666667 0.085743684 1.34202454 0.880429314 -7 -7 -7 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3L 15810702 15810708 - 3L_15810702_15810708_- 0.520893759 0.468763947 0.494828853 0.036861406 fwe FBtr0075541|FBtr0075543 15810079|15810079 15812758|15812207 3L - 15810687 15810778 stop_codon fwe FlyBase G36999.3 GATCGAGCGGGGATTGTGAACAACGCCCAGCCCTTCTCCTTCACCGGTGCCGTGGGCACGGACAGCAATGTGTGATTCAGAAGCTAGCTGAT 43 15810710 0.951120057 8 40 191 0.981481481 1.72427587 0.425925926 0.209302326 0.37037037 43 1 0 53 3L:15810687-15810778 7 fwe FBtr0075541|FBtr0075543 15810079|15810079 15812758|15812207 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 15810586 15810734 stop_codon fwe FlyBase G27939.1 CGGTGCCGTGGGCACGGACAGCAATGTGTGATTCAGAAGCTAGCTGATCGGGATTTCGAGGAATCGAAGAGCTGGGTGTGCCGTGAGAAAACAAGACTCAAAACGCAACATTTGAAGGGCAAACCTAACCAAGAGAACATCGGCAGGCA 43 15810710 0.952560008 14 41 179 0.970588235 1.51851394 0.441176471 0.441860465 0.647058824 43 1 1 66 3L:15810586-15810734 7 23.5 1861 FBgn0261722 816.3866667 52.16 79.50666667 0.028785379 0.45053681 0.295572698 2 2 2 0.15 dme-miR-317-3p 8mer-A1 TGTGTTCA 3L 15819805 15819812 - 3L_15819805_15819812_- 0.6311288 0.631129 0.6311289 1.41E-07 DCP2 FBtr0304975 15818732 15821444 3L - 15819766 15820013 3'utr DCP2 FlyBase G37008.1 TTCCTATAATTCGTAAGCATGTCACGTTAGCATGTTAACTAATTCCTCCTTCAAACGTAGTCTCCAATGTGTGAAACAGTTGCCTATTAGCGTTTATCTTTAGACTAAGCAATGACCAGCAATGTCTCCAAGGTGGTAACATCAGAGCCAATAGGTTTACATCACCGAAAATCAAAAGAAGTTCCCTGTAACTCGGCCTTTTGTGTTCAATTCGAAAGTAGTTCTCTAAGCGTATCGGCCGAAAACAG 66 15819813 0.980954254 24 63 582 0.960526316 1.86332286 0.105263158 0.136363636 0.25 66 3 0 73 3L:15819766-15820013 8 DCP2 FBtr0304975 15818732 15821444 TGTGTTCA 8mer-A1 dme-miR-317-3p 3L - 15819755 15819834 3'utr DCP2 FlyBase G27947.1 AGTTCCCTGTAACTCGGCCTTTTGTGTTCAATTCGAAAGTAGTTCTCTAAGCGTATCGGCCGAAAACAGTAAGAAATTTG 24 15819813 0.987805672 9 24 214 1 1.544068044 0.228571429 0.333333333 0.542857143 24 0 0 35 3L:15819755-15819834 8 22 1862 FBgn0036534 5151.046667 115.94 176.9933333 0.004270977 0.189753321 0.124298467 1 1 1 0.15 dme-miR-980-3p 6mer3-8 GGCAGC 3L 15820319 15820324 - 3L_15820319_15820324_- 0.999164225 0.996760674 0.997962449 0.001699531 DCP2 FBtr0304975 15818732 15821444 3L - 15820283 15820383 3'utr DCP2 FlyBase G37010.1 ACACCGTTCGAAATGAAGAGCCACTTTCCCACAATCAGGGGCAATATCAGGCATATCTCGGCAGCAAAGTGTTTCGTCAATTTTTGATTGACCACTTGGGA 20 15820327 0.942434576 8 16 71 0.791666667 0.801632346 0.083333333 0.2 0.333333333 20 3 2 19 3L:15820283-15820383 6 DCP2 FBtr0304975 15818732 15821444 GGCAGC 6mer3-8 dme-miR-980-3p 3L - 15820265 15820347 3'utr DCP2 FlyBase G27950.1 AGGGGCAATATCAGGCATATCTCGGCAGCAAAGTGTTTCGTCAATTTTTGATTGACCACTTGGGAATGGGATTGTGAAGCTAA 15 15820328 0.973641092 9 12 78 0.857142857 0.77815125 0.238095238 0.266666667 0.476190476 15 1 2 18 3L:15820265-15820347 6 12 1863 FBgn0036534 5151.046667 115.94 176.9933333 0.002329624 0.103501811 0.067799164 3 4 3.5 0.15 dme-bantam-3p 6mer3-8 TGATCT 3L 15820468 15820473 - 3L_15820468_15820473_- 0.971738222 0.965326119 0.968532171 0.004534039 DCP2 FBtr0304975 15818732 15821444 3L - 15820417 15820518 3'utr DCP2 FlyBase G37011.1 AATGTAAATAATTAAATTGTGATATAGTATTTCTTAGCACAATTGTGATCTTAGCAAACGGCTGGCAACTACAAAAACTTTTATAAGCGCAACCACAACACC 663 15820469 0.981746994 17 638 4683 0.958083832 1.823908741 0.032335329 0.214177979 0.376047904 663 24 11 800 3L:15820417-15820518 6 DCP2 FBtr0304975 15818732 15821444 TGATCT 6mer3-8 dme-bantam-3p 3L - 15820439 15820619 3'utr DCP2 FlyBase G27951.1 AAATAATATTTCCGGGCCGTATTACTTACTGCCCGCCCCCACCTATGAAAGTTAGACGAGAGAGGAGAGAAAGATGTGTAAGAAATATTACAAATAATAACAATGTAAATAATTAAATTGTGATATAGTATTTCTTAGCACAATTGTGATCTTAGCAAACGGCTGGCAACTACAAAAACTT 500 15820468 0.966631548 27 476 3364 0.951822917 1.96082739 0.029947917 0.406 0.61328125 500 30 7 731 3L:15820439-15820619 6 379.5 1864 FBgn0036534 5151.046667 115.94 176.9933333 0.073674347 3.273244782 2.144148556 -4 -5 -4.5 0.15 dme-miR-14-3p 6mer2-7 AGACTG 3L 15956218 15956223 + 3L_15956218_15956223_+ 0.984534389 0.996868256 0.990701323 0.008721384 GXIVsPLA2 FBtr0075509|FBtr0273189|FBtr0333572 15956052|15955390|15956052 15956252|15956252|15956465 3L + 15956181 15956253 3'utr GXIVsPLA2 FlyBase G30661.1 CATTATTGTATACCAAATAGTGGCATGCCAACGGTCCAGACTGTTAAATACATTGATATTTTTACCTATTATA 71 15956224 0.711175127 9 66 364 0.931034483 1.607455023 0.091954023 0.197183099 0.344827586 71 5 1 81 3L:15956181-15956253 6 GXIVsPLA2 FBtr0333572|FBtr0273189 15956052|15955390 15956465|15956252 AGACTG 6mer2-7 dme-miR-14-3p 3L + 15956187 15956265 3'utr GXIVsPLA2 FlyBase G23193.1 TGTATACCAAATAGTGGCATGCCAACGGTCCAGACTGTTAAATACATTGATATTTTTACCTATTATAAAGATGCTATAT 46 15956224 0.723541952 9 43 233 0.897058824 1.785329835 0.014705882 0.347826087 0.558823529 46 7 0 61 3L:15956187-15956265 6 52 1865 FBgn0036545 264.6666667 31.66 47.96 0.196473552 1.642451042 1.084236864 -6 -6 -6 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 3L 15958136 15958142 + 3L_15958136_15958142_+ 0.762970193 0.77088301 0.766926602 0.005595195 elgi FBtr0075510|FBtr0333573 15957969|15957969 15958433|15958433 3L + 15958106 15958149 3'utr elgi FlyBase G30668.1 ATTCAAGCGCCTCATGACGACTTTCAAGTTGTACAAAAAATATA 8 15958134 0.967598524 2 8 44 1 1.113943352 0 0.375 0.615384615 8 0 0 13 3L:15958106-15958149 7 elgi FBtr0075510|FBtr0333573 15957969|15957969 15958433|15958433 GTACAAA 7mer-A1 dme-miR-305-5p 3L + 15958096 15958149 3'utr elgi FlyBase G23199.1 AAAACAAACCATTCAAGCGCCTCATGACGACTTTCAAGTTGTACAAAAAATATA 5 15958134 0.9768065 3 5 32 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3L:15958096-15958149 7 5.5 1866 FBgn0036546 86 6.756666667 10.27666667 0.063953488 0.814010853 0.535192994 2 2 2 0.15 dme-miR-1002-5p 6mer3-8 CTACTT 3L 15960891 15960896 - 3L_15960891_15960896_- 0.406355344 0.344950782 0.375653063 0.043419538 l(3)72Ab FBtr0075527 15960834 15960993 3L - 15960862 15960958 3'utr l(3)72Ab FlyBase G37050.1 AAATGAAAATCAATCATTTTACAATTTACGCGCATTAATTGTAGCAATAATAAATTCGTGTACTACTTTAGTAGAAACCAAATTGTACAAGGATACA 29 15960900 0.979470124 8 28 226 0.971428571 1.230448921 0 0.206896552 0.342857143 29 0 1 34 3L:15960862-15960958 6 l(3)72Ab FBtr0075527 15960834 15960993 CTACTT 6mer3-8 dme-miR-1002-5p 3L - 15960877 15960910 3'utr l(3)72Ab FlyBase G27974.1 AATAAATTCGTGTACTACTTTAGTAGAAACCAAA 10 15960900 0.807530463 2 9 74 1 1.113943352 0 0.3 0.461538462 10 0 0 13 3L:15960877-15960910 6 15.5 1867 FBgn0263599 2057.39 37.04 56.85333333 0.007533817 0.418466523 0.272631332 4 4 4 0.15 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3L 15991754 15991761 + 3L_15991754_15991761_+ 0.518403797 0.519772214 0.519088005 0.000967605 Hip14 FBtr0333577 15990856 15992464 3L + 15991741 15991780 3'utr Hip14 FlyBase G30694.1 AATTATGCACTAGTCTAGTCAGAAAATTATTTAAGTAAAA 29 15991751 0.716583706 8 25 207 0.875 1.447158031 0.125 0.103448276 0.1875 29 4 0 28 3L:15991741-15991780 8 Hip14 FBtr0333577 15990856 15992464 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L + 15991738 15991804 3'utr Hip14 FlyBase G23218.1 TCTAATTATGCACTAGTCTAGTCAGAAAATTATTTAAGTAAAATGTTAAAGTGCAACTACAGCCACA 25 15991752 0.819522677 9 23 148 0.888888889 1.505149978 0.027777778 0.32 0.527777778 25 4 0 32 3L:15991738-15991804 8 25 1868 FBgn0259824 761.04 23.55 36.16 0.032849785 1.061571125 0.691371681 3 2 2.5 0.15 dme-miR-283-5p 6mer3-8 TGATAT 3L 15994508 15994513 - 3L_15994508_15994513_- 0.997081387 0.995661983 0.996371685 0.001003667 CG5830 FBtr0333579|FBtr0075521 15992667|15992667 15994730|15994730 3L - 15994469 15994525 3'utr CG5830 FlyBase G37117.1 ATAAGTTTTATATGATATACATAATTTTTACAGAACCCAATTTACACGGCACATTTG 13 15994510 0.857443896 3 12 118 0.933333333 0.84509804 0 0.153846154 0.266666667 13 0 1 14 3L:15994469-15994525 6 CG5830 FBtr0333579|FBtr0075521 15992667|15992667 15994730|15994730 TGATAT 6mer3-8 dme-miR-283-5p 3L - 15994473 15994523 3'utr CG5830 FlyBase G28017.1 AAGTTTTATATGATATACATAATTTTTACAGAACCCAATTTACACGGCACA 13 15994510 0.895769881 4 13 98 1 1.322219295 0.095238095 0.615384615 0.761904762 13 0 0 21 3L:15994473-15994523 6 8 1869 FBgn0036556 753.23 25.73 39.48333333 0.010620926 0.310921104 0.202617138 -3 -3 -3 0.15 dme-miR-283-5p 8mer-A1 TGATATTA 3L 1600369 1600376 + 3L_1600369_1600376_+ 0.558726884 0.431296225 0.495011555 0.090107112 CG13917 FBtr0072747|FBtr0333359|FBtr0347066 1599860|1599860|1599860 1600845|1600845|1600845 3L + 1600353 1600380 3'utr CG13917 FlyBase G27172.1 GAAAACAAGTATTTGGTGATATTATTTA 9 1600365 0.709440926 3 9 77 1 0.954242509 0.111111111 0 0 9 0 0 9 3L:1600353-1600380 8 CG13917 FBtr0347066|FBtr0333359|FBtr0072747 1599860|1599860|1599860 1600845|1600845|1600845 TGATATTA 8mer-A1 dme-miR-283-5p 3L + 1600352 1600381 3'utr CG13917 FlyBase G20573.1 TGAAAACAAGTATTTGGTGATATTATTTAG 10 1600365 0.789871277 3 9 89 0.941176471 0.903089987 0.117647059 0.4 0.647058824 10 0 1 16 3L:1600352-1600381 8 9.5 1870 FBgn0035237 346.41 5.056666667 7.816666667 0.027424151 1.878707976 1.215351812 4 4 4 0.15 dme-miR-970-3p 6mer3-8 TCTTAT 3L 16006650 16006655 - 3L_16006650_16006655_- 0.898665388 0.896216059 0.897440724 0.001731917 mib1 FBtr0075520|FBtr0333578 16006550|16006550 16006732|16006732 3L - 16006644 16006694 3'utr mib1 FlyBase G37129.1 ACAGCCTTCGAAGTATTAGGATATTTAAAGGACTCACATTCTTATACACAC 15 16006656 0.738583091 4 12 72 0.882352941 0.698970004 0.058823529 0.214285714 0.352941176 14 0 2 15 3L:16006644-16006694 6 mib1 FBtr0075520|FBtr0333578 16006550|16006550 16006732|16006732 TCTTAT 6mer3-8 dme-miR-970-3p 3L - 16006630 16006669 3'utr mib1 FlyBase G28028.1 TAAAGGACTCACATTCTTATACACACATATATACACACAC 18 16006656 0.9697424 2 17 90 0.961538462 1.397940009 0 0.333333333 0.538461538 18 1 0 25 3L:16006630-16006669 6 12.5 1871 FBgn0263601 566.1 17.78333333 27.41 0.022080904 0.702905342 0.456037942 1 1 1 0.15 dme-miR-14-3p 7mer-m8 AAGACTG 3L 16032018 16032024 + 3L_16032018_16032024_+ 0.477892163 0.463357753 0.470624958 0.010277373 Notum FBtr0075435 16031340 16032752 3L + 16031971 16032032 3'utr Notum FlyBase G30708.1 AAGAAATGAAATCTGCTTAACGAGAAACTAAACACAAATGCAACCACAAGACTGTTTTTATG 150 16032025 0.892442159 11 147 748 0.974619289 2.283301229 0.025380711 0.246666667 0.426395939 150 5 0 192 3L:16031971-16032032 7 Notum FBtr0075435 16031340 16032752 AAGACTG 7mer-m8 dme-miR-14-3p 3L + 16031969 16032032 3'utr Notum FlyBase G23228.1 CAAAGAAATGAAATCTGCTTAACGAGAAACTAAACACAAATGCAACCACAAGACTGTTTTTATG 109 16032025 0.819916531 9 105 582 0.96969697 2.204119983 0.048484848 0.403669725 0.606060606 109 5 0 160 3L:16031969-16032032 7 112 1872 FBgn0044028 1178.056667 37.54333333 57.65 0.095071827 2.983219391 1.942758023 -7 -7 -7 0.15 dme-miR-14-3p 6mer2-7 AGACTG 3L 16032172 16032177 + 3L_16032172_16032177_+ 0.999997722 0.999342612 0.999670167 0.000463226 Notum FBtr0075435 16031340 16032752 3L + 16032126 16032196 3'utr Notum FlyBase G30709.1 TTGATAGTTTATGACCCGTTTAGGATTTTACTTGTGTGTGGAATCTAGACTGTTTCAAATGCCCCACGCAT 66 16032178 0.672011488 11 61 544 0.965116279 1.618048097 0.104651163 0.227272727 0.406976744 66 2 1 83 3L:16032126-16032196 6 Notum FBtr0075435 16031340 16032752 AGACTG 6mer2-7 dme-miR-14-3p 3L + 16032121 16032196 3'utr Notum FlyBase G23229.1 TTTATTTGATAGTTTATGACCCGTTTAGGATTTTACTTGTGTGTGGAATCTAGACTGTTTCAAATGCCCCACGCAT 53 16032178 0.930040603 12 49 453 0.925925926 1.875061263 0.135802469 0.41509434 0.617283951 53 6 0 75 3L:16032121-16032196 6 46.5 1873 FBgn0044028 1178.056667 37.54333333 57.65 0.039471785 1.238568765 0.8065915 -6 -6 -6 0.15 dme-miR-190-5p 8mer-A1 ACATATCA 3L 16032302 16032309 + 3L_16032302_16032309_+ 0.601116892 0.478227928 0.53967241 0.086895645 Notum FBtr0075435 16031340 16032752 3L + 16032243 16032336 3'utr Notum FlyBase G30710.1 TTATTTTGTACCTACCTCAGATCAGTAAGAATGAATGAAATTGATAAACAGCTGCCTTCACATATCATTGCGTACCTGTGCAACGAAAATCAAA 38 16032311 0.971031106 9 38 223 1 1.612783857 0.195121951 0.078947368 0.146341463 38 0 0 41 3L:16032243-16032336 8 Notum FBtr0075435 16031340 16032752 ACATATCA 8mer-A1 dme-miR-190-5p 3L + 16032241 16032368 3'utr Notum FlyBase G23230.1 ATTTATTTTGTACCTACCTCAGATCAGTAAGAATGAATGAAATTGATAAACAGCTGCCTTCACATATCATTGCGTACCTGTGCAACGAAAATCAAATACTTAATACTTAACTTAATACCGCCCGCATT 39 16032310 0.922475075 12 38 215 0.983606557 1.77815125 0.098360656 0.461538462 0.655737705 39 1 0 60 3L:16032241-16032368 8 20.5 1874 FBgn0044028 1178.056667 37.54333333 57.65 0.01740154 0.546035692 0.355594102 -9 -8 -8.5 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 16032591 16032598 + 3L_16032591_16032598_+ 0.499964844 0.499951307 0.499958075 9.55E-06 Notum FBtr0075435 16031340 16032752 3L + 16032548 16032666 3'utr Notum FlyBase G30712.1 AAGCCTGTACAGAACTGGTTGAAGTTTAGCCCTAAGAATTGTTGTACTTAAACTTAGTGATAATCATAAACGTAATGCAATTCGCAAGCTTATTAGCTTTTGTTAGCGTTCTTCAAATG 87 16032590 0.972755261 10 82 776 0.951923077 1.995635195 0.115384615 0.16091954 0.298076923 87 5 0 99 3L:16032548-16032666 8 Notum FBtr0075435 16031340 16032752 GTACTTAA 8mer-A1 dme-miR-252-5p 3L + 16032544 16032617 3'utr Notum FlyBase G23231.1 TGCTAAGCCTGTACAGAACTGGTTGAAGTTTAGCCCTAAGAATTGTTGTACTTAAACTTAGTGATAATCATAAA 58 16032590 0.75971643 8 57 519 0.97752809 1.939519253 0.078651685 0.396551724 0.606741573 58 2 0 87 3L:16032544-16032617 8 61 1875 FBgn0044028 1178.056667 37.54333333 57.65 0.051780192 1.624789133 1.05810928 1 1 1 0.15 dme-miR-1007-3p 6mer3-8 TGAGCT 3L 16079246 16079251 + 3L_16079246_16079251_+ 0.992304702 0.949495016 0.970899859 0.030271029 Mbs FBtr0333616|FBtr0308216|FBtr0075441 16078935|16063314|16078935 16079589|16079589|16079589 3L + 16079226 16079279 3'utr Mbs FlyBase G30734.1 AGCTAAAATTAAGTTCACATTGAGCTCATTGGCTTTGGACTGGTCACTGGTAAT 26 16079245 0.927387724 5 26 199 1 1.491361694 0.419354839 0.192307692 0.322580645 26 0 0 31 3L:16079226-16079279 6 Mbs FBtr0308216|FBtr0075441|FBtr0333616 16063314|16078935|16078935 16079589|16079589|16079589 TGAGCT 6mer3-8 dme-miR-1007-3p 3L + 16079231 16079268 3'utr Mbs FlyBase G23250.1 AAATTAAGTTCACATTGAGCTCATTGGCTTTGGACTGG 15 16079245 0.813225365 2 15 104 1 1.230448921 0.705882353 0.133333333 0.235294118 15 0 0 17 3L:16079231-16079268 6 20.5 1876 FBgn0005536 2947.596667 72.49666667 111.4433333 0.006954819 0.282771622 0.18394999 1 1 1 0.15 dme-miR-1003-3p 7mer-A1 TGTGAGA 3L 16081969 16081975 + 3L_16081969_16081975_+ 0.822657781 0.8232658 0.822961791 0.000429921 Mbs FBtr0112852|FBtr0112851|FBtr0301575|FBtr0301473|FBtr0308213|FBtr0308214|FBtr0301472|FBtr0308215|FBtr0112850 16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844 16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026 3L + 16081862 16081986 3'utr Mbs FlyBase G30741.2 CTGTTATTTATTAAATTCGCCTAAGAGATTTTGTGTTACTCGTAAATGGAAACGATAATCAAGCATAAACAACCATAAGAACGTGAATTGTGTAATATGTAAAATTGTGTGAGAAAATATTTATG 128 16081967 0.741365912 19 120 976 0.97260274 1.851258349 0.164383562 0.134920635 0.253424658 126 3 1 142 3L:16081862-16081986 7 Mbs FBtr0301472|FBtr0308215|FBtr0112850|FBtr0308214|FBtr0301473|FBtr0308213|FBtr0112852|FBtr0112851|FBtr0301575 16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844 16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026 TGTGAGA 7mer-A1 dme-miR-1003-3p 3L + 16081929 16082033 3'utr Mbs FlyBase G23257.1 AACAACCATAAGAACGTGAATTGTGTAATATGTAAAATTGTGTGAGAAAATATTTATGAAAATTTGATTCAAATACGAAACTTAATAAATGTGATCGCAAGCAAA 94 16081967 0.803345873 11 91 629 0.970149254 2.113943352 0.052238806 0.35106383 0.544776119 94 4 0 130 3L:16081929-16082033 7 58 1877 FBgn0005536 2947.596667 72.49666667 111.4433333 0.019677048 0.800036783 0.520443873 2 2 2 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 16082018 16082023 + 3L_16082018_16082023_+ 0.680848952 0.521809825 0.601329388 0.112457697 Mbs FBtr0112852|FBtr0112852|FBtr0112852|FBtr0112851|FBtr0112851|FBtr0112851|FBtr0301575|FBtr0301575|FBtr0301575|FBtr0301473|FBtr0301473|FBtr0301473|FBtr0308213|FBtr0308213|FBtr0308213|FBtr0308214|FBtr0308214|FBtr0308214|FBtr0301472|FBtr0301472|FBtr0301472|FBtr0308215|FBtr0308215|FBtr0308215|FBtr0112850|FBtr0112850|FBtr0112850 16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844 16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026 3L + 16081988 16082033 3'utr Mbs FlyBase G30741.3 AAATTTGATTCAAATACGAAACTTAATAAATGTGATCGCAAGCAAA 84 16082014 0.791304106 7 80 450 0.96 1.380211242 0.05 0.154761905 0.29 84 1 3 96 3L:16081988-16082033 6 Mbs FBtr0301472|FBtr0301472|FBtr0301472|FBtr0308215|FBtr0308215|FBtr0308215|FBtr0112850|FBtr0112850|FBtr0112850|FBtr0308214|FBtr0308214|FBtr0308214|FBtr0301473|FBtr0301473|FBtr0301473|FBtr0308213|FBtr0308213|FBtr0308213|FBtr0112852|FBtr0112852|FBtr0112852|FBtr0112851|FBtr0112851|FBtr0112851|FBtr0301575|FBtr0301575|FBtr0301575 16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844 16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 16081929 16082033 3'utr Mbs FlyBase G23257.1 AACAACCATAAGAACGTGAATTGTGTAATATGTAAAATTGTGTGAGAAAATATTTATGAAAATTTGATTCAAATACGAAACTTAATAAATGTGATCGCAAGCAAA 94 16082014 0.803345873 11 91 629 0.970149254 2.113943352 0.052238806 0.35106383 0.544776119 94 4 0 130 3L:16081929-16082033 6 60 1878 FBgn0005536 2947.596667 72.49666667 111.4433333 0.020355567 0.827624259 0.538390213 4 4 4 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 16088030 16088035 - 3L_16088030_16088035_- 0.996533784 0.998144637 0.997339211 0.001139008 CG5235 FBtr0333599|FBtr0075497 16087815|16087625 16088100|16088100 3L - 16087993 16088083 3'utr CG5235 FlyBase G37169.1 AAGTATTATTTAAGCCATCCAAAACGTTTTCAGTGAAAATGCTAGCTTACCAAATGAACGATTATCAAATATTCAAAATTATTCTCGTAAT 50 16088036 0.959429883 6 49 242 0.969230769 1.799340549 0.123076923 0.24 0.415384615 50 2 0 63 3L:16087993-16088083 6 CG5235 FBtr0333599|FBtr0075497 16087815|16087625 16088100|16088100 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 16087994 16088058 3'utr CG5235 FlyBase G28067.1 GTTTTCAGTGAAAATGCTAGCTTACCAAATGAACGATTATCAAATATTCAAAATTATTCTCGTAA 36 16088036 0.964036869 8 34 177 0.944444444 1.707570176 0.166666667 0.472222222 0.648148148 36 3 0 51 3L:16087994-16088058 6 39 1879 FBgn0036565 1024 48.82333333 74.77 0.038085938 0.798798389 0.521599572 1 1 1 0.15 dme-bantam-3p 6mer3-8 TGATCT 3L 16095599 16095604 + 3L_16095599_16095604_+ 0.999997572 0.999423348 0.99971046 0.000406091 ClC-c FBtr0333598|FBtr0302503|FBtr0075444 16095195|16095195|16095195 16096151|16095854|16095854 3L + 16095564 16095621 3'utr ClC-c FlyBase G30759.1 TATATGTTCACATACAGCTTGATAACACTATGAAATGATCTATAGTTGTAAAAGGAAC 15 16095600 0.742966812 6 15 111 1 1.230448921 0.411764706 0.133333333 0.235294118 15 0 0 17 3L:16095564-16095621 6 ClC-c FBtr0075444|FBtr0302503|FBtr0333598 16095195|16095195|16095195 16095854|16095854|16096151 TGATCT 6mer3-8 dme-bantam-3p 3L + 16095577 16095618 3'utr ClC-c FlyBase G23268.1 ACAGCTTGATAACACTATGAAATGATCTATAGTTGTAAAAGG 12 16095599 0.985004114 3 10 81 0.894736842 1.230448921 0.421052632 0.5 0.684210526 12 2 0 17 3L:16095577-16095618 6 12.5 1880 FBgn0036566 804.2333333 24.65333333 37.96666667 0.015542753 0.507030827 0.329236172 -1 0 -0.5 0.15 dme-miR-13b-2-5p 6mer2-7 TTGACG 3L 16120513 16120518 + 3L_16120513_16120518_+ 0.980433544 0.993804877 0.987119211 0.009455008 Taf4 FBtr0075449|FBtr0301911|FBtr0075450|FBtr0075448|FBtr0333291|FBtr0333290|FBtr0114589|FBtr0345951|FBtr0075451 16120071|16120071|16120071|16120071|16120071|16120071|16120071|16120071|16120071 16121368|16121368|16121368|16121651|16121368|16121368|16121368|16121368|16121368 3L + 16120493 16120545 3'utr Taf4 FlyBase G30785.1 TAATGTTTGCATCAACTGCATTGACGGCCTTATCTAAACGATATAAACATAAT 17 16120523 0.717692008 6 16 112 0.909090909 1.301029996 0.045454545 0.294117647 0.454545455 17 2 0 20 3L:16120493-16120545 6 Taf4 FBtr0333291|FBtr0114589|FBtr0333290|FBtr0345951|FBtr0075451|FBtr0075449|FBtr0301911|FBtr0075450|FBtr0075448 16120071|16120071|16120071|16120071|16120071|16120071|16120071|16120071|16120071 16121368|16121368|16121368|16121368|16121368|16121368|16121368|16121368|16121651 TTGACG 6mer2-7 dme-miR-13b-2-5p 3L + 16120501 16120535 3'utr Taf4 FlyBase G23289.1 GCATCAACTGCATTGACGGCCTTATCTAAACGATA 5 16120522 0.690117559 3 4 27 0.7 0.84509804 0 0.4 0.7 5 3 0 7 3L:16120501-16120535 6 10 1881 FBgn0010280 2452.246667 62.76333333 96.23333333 0.004077893 0.159328695 0.103914098 -10 -9 -9.5 0.15 dme-miR-999-3p 6mer3-8 AGTTAA 3L 16121480 16121485 + 3L_16121480_16121485_+ 0.999968102 0.999873714 0.999920908 6.68E-05 Taf4 FBtr0075448 16120071 16121651 3L + 16121448 16121495 3'utr Taf4 FlyBase G30794.2 TTTATGTCGTATGGAATATGTAACGGTATCTCAGTTAATTAGCTAGTT 12 16121482 0.987204677 5 8 99 0.722222222 1.113943352 0.055555556 0.333333333 0.555555556 12 5 0 13 3L:16121448-16121495 6 Taf4 FBtr0075448 16120071 16121651 AGTTAA 6mer3-8 dme-miR-999-3p 3L + 16121451 16121500 3'utr Taf4 FlyBase G23296.1 ATGTCGTATGGAATATGTAACGGTATCTCAGTTAATTAGCTAGTTAAATC 11 16121482 0.989439887 4 8 91 0.705882353 1.079181246 0 0.363636364 0.588235294 11 5 0 12 3L:16121451-16121500 6 9.5 1882 FBgn0010280 2452.246667 62.76333333 96.23333333 0.003873999 0.15136226 0.098718393 -2 -2 -2 0.15 dme-miR-92b-3p 7mer-m1 TGCAATT 3L 16136528 16136534 + 3L_16136528_16136534_+ 0.764374839 0.725020758 0.744697799 0.02782748 elg1 FBtr0089714|FBtr0307518|FBtr0089713 16136465|16136465|16136465 16136691|16136691|16136691 3L + 16136497 16136538 3'utr elg1 FlyBase G30828.1 AAATTGGTGGAGCAGCTCCGCCGGCTTTGTTTGCAATTTATT 10 16136526 0.836103498 6 10 63 1 1.176091259 0.266666667 0.3 0.533333333 10 0 0 15 3L:16136497-16136538 7 elg1 FBtr0089714|FBtr0307518|FBtr0089713 16136465|16136465|16136465 16136691|16136691|16136691 TGCAATT 7mer-m1 dme-miR-92b-3p 3L + 16136493 16136529 3'utr elg1 FlyBase G23321.1 TTTGAAATTGGTGGAGCAGCTCCGCCGGCTTTGTTTG 5 16136525 0.860100951 4 5 34 1 0.77815125 0.666666667 0.2 0.333333333 5 0 0 6 3L:16136493-16136529 2 4.5 1883 FBgn0036574 878.6533333 25.39 38.88333333 0.005121474 0.177235132 0.115730819 2 3 2.5 0.15 dme-miR-304-5p 6mer3-8 TGAGAT 3L 16136604 16136609 + 3L_16136604_16136609_+ 0.982242311 0.999925945 0.991084128 0.012504193 elg1 FBtr0089714|FBtr0307518|FBtr0089713 16136465|16136465|16136465 16136691|16136691|16136691 3L + 16136539 16136668 3'utr elg1 FlyBase G30829.1 CAGATCGTTTAAGAAGAGTTGATCTTTTTTAAGATAGCTTTGTGGACATGAAGATGTAGCTATTATGAGATAAACCTAGAACTATTTACAATTTAACTATGATAAACTAACTACGACCTCATCCTATGTT 16 16136604 0.980340902 11 15 115 0.952380952 1 0.047619048 0.1875 0.380952381 16 0 1 20 3L:16136539-16136668 6 elg1 FBtr0089714|FBtr0307518|FBtr0089713 16136465|16136465|16136465 16136691|16136691|16136691 TGAGAT 6mer3-8 dme-miR-304-5p 3L + 16136579 16136610 3'utr elg1 FlyBase G23322.1 TGTGGACATGAAGATGTAGCTATTATGAGATA 6 16136601 0.989423315 3 4 37 0.75 0.77815125 0 0.166666667 0.375 6 2 0 6 3L:16136579-16136610 6 4 1884 FBgn0036574 878.6533333 25.39 38.88333333 0.004552421 0.15754234 0.102871839 0 3 1.5 0.15 dme-miR-932-5p 6mer3-8 GGAATT 3L 16139512 16139517 - 3L_16139512_16139517_- 0.999975606 0.999999921 0.999987764 1.72E-05 CG5151 FBtr0307521|FBtr0346525|FBtr0307519|FBtr0307520 16137800|16139499|16139499|16139499 16140460|16140460|16140460|16140460 3L - 16139506 16139553 3'utr CG5151 FlyBase G37208.1 AGTTCAATTGAAATTTGTATTTGTATATTTGCTAACGGAATTACGATG 8 16139541 0.992229324 7 7 78 0.888888889 0.903089987 0.222222222 0.125 0.222222222 8 1 0 8 3L:16139506-16139553 6 CG5151 FBtr0307519|FBtr0307520|FBtr0307521|FBtr0346525 16139499|16139499|16137800|16139499 16140460|16140460|16140460|16140460 GGAATT 6mer3-8 dme-miR-932-5p 3L - 16139509 16139562 3'utr CG5151 FlyBase G28094.1 ACAATTTTTAGTTCAATTGAAATTTGTATTTGTATATTTGCTAACGGAATTACG 7 16139539 0.992576415 6 7 78 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3L:16139509-16139562 6 2 1885 FBgn0036576 611.6966667 13.02666667 19.93 0.003269594 0.153531218 0.100351229 24 22 23 0.15 dme-miR-283-5p 8mer-A1 TGATATTA 3L 1617380 1617387 - 3L_1617380_1617387_- 0.566018755 0.483370972 0.524694863 0.05844082 CG13926 FBtr0072823 1617346 1617423 3L - 1617367 1617414 3'utr CG13926 FlyBase G33398.1 AATGGAGGCGTCGCCTCCACAAGTTGTTGATATTACAAGTAAAGTTTT 15 1617391 0.824440077 2 15 123 1 1.204119983 0.0625 0.066666667 0.125 15 0 0 16 3L:1617367-1617414 8 CG13926 FBtr0072823 1617346 1617423 TGATATTA 8mer-A1 dme-miR-283-5p 3L - 1617370 1617414 3'utr CG13926 FlyBase G25263.1 AATGGAGGCGTCGCCTCCACAAGTTGTTGATATTACAAGTAAAGT 8 1617391 0.897763154 2 8 58 1 1.079181246 0.083333333 0.5 0.666666667 8 0 0 12 3L:1617370-1617414 8 11 1886 FBgn0035243 84.33333333 14.92666667 22.79 0.130434783 0.736936132 0.482667837 4 4 4 0.15 dme-bantam-3p 8mer-A1 TGATCTCA 3L 16230842 16230849 + 3L_16230842_16230849_+ 0.631049602 0.631091925 0.631070764 2.99E-05 CG5027 FBtr0075457 16230770 16231139 3L + 16230792 16230866 3'utr CG5027 FlyBase G30835.1 TCTAGTGAAAGCTTTTGATTGCGAGTGAATGTTAGAGAAAGTAAATAAGATGATCTCATAGTGCATTTCCGAGCA 67 16230842 0.975587111 7 66 419 0.9875 1.897627091 0.5125 0.149253731 0.2875 67 1 0 79 3L:16230792-16230866 8 CG5027 FBtr0075457 16230770 16231139 TGATCTCA 8mer-A1 dme-bantam-3p 3L + 16230820 16230862 3'utr CG5027 FlyBase G23326.1 ATGTTAGAGAAAGTAAATAAGATGATCTCATAGTGCATTTCCG 58 16230842 0.796350367 5 53 362 0.905882353 1.886490725 0.564705882 0.362068966 0.564705882 58 8 0 77 3L:16230820-16230862 8 61 1887 FBgn0036579 214.6666667 14.06 21.50666667 0.284161491 4.338549075 2.83632982 0 0 0 0.15 dme-miR-31a-5p 8mer-A1 TCTTGCCA 3L 16236638 16236645 + 3L_16236638_16236645_+ 0.631085454 0.631136379 0.631110916 3.60E-05 l(3)72Dp FBtr0075459 16236240 16236999 3L + 16236625 16236662 3'utr l(3)72Dp FlyBase G30844.1 AAGCGTTAAATATTCTTGCCAAATCAAGAGACTAATAT 8 16236637 0.703653725 3 8 57 1 0.954242509 0 0.125 0.222222222 8 0 0 9 3L:16236625-16236662 8 l(3)72Dp FBtr0075459 16236240 16236999 TCTTGCCA 8mer-A1 dme-miR-31a-5p 3L + 16236606 16236661 3'utr l(3)72Dp FlyBase G23333.1 AAAACAAAATTCTATCTTTAAGCGTTAAATATTCTTGCCAAATCAAGAGACTAATA 11 16236639 0.98601774 4 9 70 0.866666667 0.812913357 0.066666667 0.272727273 0.466666667 11 1 1 13 3L:16236606-16236661 8 9 1888 FBgn0263607 58 2.816666667 4.343333333 0.155172414 3.195266272 2.072141213 1 -1 0 0.15 dme-miR-1008-3p 6mer2-7 GCTGTG 3L 16372779 16372784 - 3L_16372779_16372784_- 0.999733817 0.999890047 0.999811932 0.00011045 roq FBtr0075423|FBtr0333265 16372435|16370936 16374520|16374520 3L - 16372766 16372808 3'utr roq FlyBase G37250.1 TTGGCGATATCCGCTCAGACTTTGGCTGTGGTGATGATGATTT 46 16372786 0.740223918 8 46 398 1 1.681241237 0.291666667 0.043478261 0.083333333 46 0 0 48 3L:16372766-16372808 6 roq FBtr0075423|FBtr0333265 16372435|16370936 16374520|16374520 GCTGTG 6mer2-7 dme-miR-1008-3p 3L - 16372772 16372807 3'utr roq FlyBase G28130.1 TGGCGATATCCGCTCAGACTTTGGCTGTGGTGATGA 30 16372786 0.718721147 5 30 244 1 1.698970004 0.18 0.366666667 0.62 30 0 0 50 3L:16372772-16372807 6 37.5 1889 FBgn0036621 1477.286667 40.04333333 61.43666667 0.025384376 0.936485474 0.610384678 2 2 2 0.15 dme-miR-1003-3p 7mer-A1 TGTGAGA 3L 16373475 16373481 - 3L_16373475_16373481_- 0.598372361 0.596309805 0.597341083 0.001458478 roq FBtr0075423|FBtr0333265|FBtr0331173 16372435|16370936|16373214 16374520|16374520|16374520 3L - 16373444 16373522 3'utr roq FlyBase G37252.1 AATAAATTAAAATCACGTCCCATTTTCCCCTTTTTGTAAACTGTGAGAAGAGTGAAGTACAGGAGAATTGACAAACAGG 10 16373488 0.982669797 7 9 63 0.9 0.954242509 0.2 0 0 10 1 0 9 3L:16373444-16373522 7 roq FBtr0331173|FBtr0075423|FBtr0333265 16373214|16372435|16370936 16374520|16374520|16374520 TGTGAGA 7mer-A1 dme-miR-1003-3p 3L - 16373466 16373519 3'utr roq FlyBase G28133.1 AAATTAAAATCACGTCCCATTTTCCCCTTTTTGTAAACTGTGAGAAGAGTGAAG 5 16373510 0.984506562 4 5 41 1 0.903089987 0 0.4 0.625 5 0 0 8 3L:16373466-16373519 7 3 1890 FBgn0036621 1477.286667 40.04333333 61.43666667 0.00203075 0.074918838 0.048830774 7 29 18 0.15 dme-miR-304-5p 6mer3-8 TGAGAT 3L 16373956 16373961 - 3L_16373956_16373961_- 0.993316754 0.994101087 0.99370892 0.000554584 roq FBtr0075423|FBtr0333265|FBtr0331173 16372435|16370936|16373214 16374520|16374520|16374520 3L - 16373922 16373986 3'utr roq FlyBase G37254.1 CAGCGAAGATTTTAAAGCAATTTTCTGAGATGAAATAGAGATACTGTGCACTAATTAACTGAATC 30 16373965 0.986502343 6 30 252 1 1.531478917 0 0.1 0.205882353 30 0 0 34 3L:16373922-16373986 6 roq FBtr0331173|FBtr0075423|FBtr0333265 16373214|16372435|16370936 16374520|16374520|16374520 TGAGAT 6mer3-8 dme-miR-304-5p 3L - 16373937 16373990 3'utr roq FlyBase G28135.2 ATAGCAGCGAAGATTTTAAAGCAATTTTCTGAGATGAAATAGAGATACTGTGCA 18 16373964 0.974481787 4 16 125 0.826086957 1.278753601 0.130434783 0.166666667 0.347826087 18 4 0 19 3L:16373937-16373990 6 22.5 1891 FBgn0036621 1477.286667 40.04333333 61.43666667 0.015230626 0.561891284 0.366230807 4 3 3.5 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 3L 1638011 1638017 - 3L_1638011_1638017_- 0.62020426 0.620204114 0.620204187 1.41E-07 metl FBtr0072814|FBtr0072813 1637940|1637940 1638040|1638040 3L - 1637994 1638037 3'utr metl FlyBase G33402.1 AATTTAGACGAATAGTTCTGTGCATTTTAAACCTTGTTCAAATC 5 1638018 0.985561738 5 5 43 1 0.954242509 0 0.6 0.777777778 5 0 0 9 3L:1637994-1638037 7 metl FBtr0072814|FBtr0072813 1637940|1637940 1638040|1638040 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 1637993 1638037 3'utr metl FlyBase G25265.1 AATTTAGACGAATAGTTCTGTGCATTTTAAACCTTGTTCAAATCA 6 1638012 0.992272545 5 5 52 0.7 0.84509804 0 0.5 0.7 6 3 0 7 3L:1637993-1638037 7 5.5 1892 FBgn0035247 536.0166667 56.80666667 87.84333333 0.010260875 0.096819622 0.062611467 1 -5 -2 0.15 dme-miR-995-5p 6mer3-8 AATTCG 3L 1640722 1640727 + 3L_1640722_1640727_+ 0.643750749 0.536185528 0.589968138 0.076060082 Bgb FBtr0072758 1640635 1640952 3L + 1640689 1640820 stop_codon Bgb FlyBase G27184.1 AGCAGCAGACGCATCACCAGCAGTTAGAGACTCAATTCGCGAATACTCAATATTTCATGGACAACTGAGAATGCTCCGAACCCCTTAAGAGGGCTTTCACTTGAGAGATTTCAATACGATTACGTTAGACAC 126 1640713 0.773529019 18 120 617 0.959459459 1.67516709 0.054054054 0.142857143 0.27027027 126 4 2 142 3L:1640689-1640820 6 Bgb FBtr0072758 1640635 1640952 AATTCG 6mer3-8 dme-miR-995-5p 3L + 1640689 1640931 stop_codon Bgb FlyBase G20582.1 AGCAGCAGACGCATCACCAGCAGTTAGAGACTCAATTCGCGAATACTCAATATTTCATGGACAACTGAGAATGCTCCGAACCCCTTAAGAGGGCTTTCACTTGAGAGATTTCAATACGATTACGTTAGACACGCTCGAATAATTATGCTCCTAGATTAGTGTTAGATGTAATGCTTACTTTACGTATGCTTTTATGGTATTATACTTACAACTTAGTGTGAAATTAGTGTCGTATCTTTAACT 100 1640713 0.919911696 27 96 560 0.965986395 1.550228353 0.095238095 0.3 0.523809524 100 2 3 142 3L:1640689-1640931 6 78 1893 FBgn0013753 472.3333333 47.15333333 72.62666667 0.165137615 1.654177859 1.07398568 9 9 9 0.15 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 16470650 16470657 - 3L_16470650_16470657_- 0.668626932 0.66861803 0.668622481 6.29E-06 aos FBtr0075408 16470384 16471298 3L - 16470594 16470686 3'utr aos FlyBase G37291.1 CGAAGGCAGTTTGAAACTGTGGCAACTCTGGCAGCTATTTTAGTGCAATTTTTGTGACGCCTTCACAGCCACTTCTCCGGAATTTGAGCAAGT 1274 16470658 0.868090257 17 1256 9187 0.984866828 2.910357557 0.401331719 0.226059655 0.4031477 1274 24 1 1627 3L:16470594-16470686 8 aos FBtr0075408 16470384 16471298 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L - 16470587 16470688 3'utr aos FlyBase G28164.1 AGCGAAGGCAGTTTGAAACTGTGGCAACTCTGGCAGCTATTTTAGTGCAATTTTTGTGACGCCTTCACAGCCACTTCTCCGGAATTTGAGCAAGTAAATTAG 1016 16470658 0.981606195 18 1003 7362 0.987228608 2.411058239 0.344827586 0.382874016 0.599616858 1016 15 5 1546 3L:16470587-16470688 8 1133 1894 FBgn0004569 11.33333333 0.5 0.773333333 99.97058824 2266 1465.086207 1 1 1 0.15 dme-miR-14-3p 6mer3-8 AAGACT 3L 16491942 16491947 - 3L_16491942_16491947_- 0.999985931 0.996600281 0.998293106 0.002393981 CG43373 FBtr0307367 16491836 16507727 3L - 16491873 16491961 3'utr CG43373 FlyBase G37301.1 CGATTCCTAATAAAAAGACTTGAACCCAGAGCAGATATTGAATGCATTGCATTGAATATTTTGCCAATGTAAATCATTCCCATCAACAC 12 16491953 0.959026325 8 12 63 1 1.230448921 0.294117647 0.25 0.470588235 12 0 0 17 3L:16491873-16491961 6 CG43373 FBtr0307367 16491836 16507727 AAGACT 6mer3-8 dme-miR-14-3p 3L - 16491929 16491997 3'utr CG43373 FlyBase G28170.1 GAGGAGCACAAGAACTAGCCTGTGCAATAACTTTAACGATTCCTAATAAAAAGACTTGAACCCAGAGCA 9 16491952 0.97609129 5 6 35 0.777777778 0.84509804 0.444444444 0 0 9 2 0 7 3L:16491929-16491997 6 6.5 1895 FBgn0263131 3.073333333 0.063333333 0.1 2.114967462 102.6315789 65 6 5 5.5 0.15 dme-miR-282-5p 6mer2-7 GAGGCT 3L 16575964 16575969 + 3L_16575964_16575969_+ 0.998079461 0.999995506 0.999037484 0.001354817 mbf1 FBtr0075393|FBtr0305570|FBtr0305569|FBtr0075394 16575868|16575868|16575868|16575868 16576408|16576871|16576408|16576871 3L + 16575941 16575994 3'utr mbf1 FlyBase G30873.1 GAACCATCAACACACGGATTCTGGAGGCTGGAGCACTGTAAGCGGCAGACGCAA 8 16575961 0.93051506 3 7 28 1 1 0.7 0.125 0.3 8 0 0 10 3L:16575941-16575994 6 mbf1 FBtr0305570|FBtr0305569|FBtr0075394|FBtr0075393 16575868|16575868|16575868|16575868 16576871|16576408|16576871|16576408 GAGGCT 6mer2-7 dme-miR-282-5p 3L + 16575953 16575991 3'utr mbf1 FlyBase G23350.1 CACGGATTCTGGAGGCTGGAGCACTGTAAGCGGCAGACG 5 16575962 0.961839735 2 4 20 0.75 0.77815125 0.75 0.6 0.75 5 2 0 6 3L:16575953-16575991 6 5.5 1896 FBgn0262732 2231.09 243.8166667 374.3166667 0.002465163 0.022557933 0.014693441 3 2 2.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3L 16576661 16576667 + 3L_16576661_16576667_+ 0.661587201 0.661565342 0.661576271 1.55E-05 mbf1 FBtr0305570|FBtr0075394 16575868|16575868 16576871|16576871 3L + 16576574 16576687 3'utr mbf1 FlyBase G30878.1 TATCGTGTAAGGCTCTTGAACTGTGCGTTTACTAATGCATTATACATATTATACAAAAACATATGCTAAATGTATTTAGAAACATTTTCTAGTCTACAAAATATTTAAATAATT 91 16576660 0.94012809 11 87 657 0.974137931 1.752048448 0.00862069 0.241758242 0.405172414 91 2 1 113 3L:16576574-16576687 7 mbf1 FBtr0305570|FBtr0075394 16575868|16575868 16576871|16576871 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 16576635 16576682 3'utr mbf1 FlyBase G23354.1 TATGCTAAATGTATTTAGAAACATTTTCTAGTCTACAAAATATTTAAA 61 16576660 0.923070235 6 61 428 1 1.886490725 0.012987013 0.196721311 0.363636364 61 0 0 77 3L:16576635-16576682 7 69 1897 FBgn0262732 2231.09 243.8166667 374.3166667 0.030926587 0.282999521 0.184335901 1 1 1 0.15 dme-bantam-3p 6mer3-8 TGATCT 3L 16589804 16589809 + 3L_16589804_16589809_+ 0.999980998 0.999980669 0.999980833 2.12E-07 l(3)73Ah FBtr0075311|FBtr0307336 16589773|16589773 16590132|16590132 3L + 16589728 16589892 stop_codon l(3)73Ah FlyBase G30898.1 GGGATCCGCCGCTTCGGCTGCAGTTTCGTCCGCGGGTCGAGCTCTAACCACTGTTTTAGTATAATGCCACAACAAATGATCTATTTTTATAATTTATTGACAATGCGTAAATATCGTAATTAGGAGAGTCGCTAGTGTTAGTCCCCTCGAAACCATGAGTGTATG 151 16589804 0.98487165 21 149 1203 0.983695652 1.655618584 0.048913043 0.165562914 0.315217391 151 0 3 181 3L:16589728-16589892 6 l(3)73Ah FBtr0307336|FBtr0075311 16589773|16589773 16590132|16590132 TGATCT 6mer3-8 dme-bantam-3p 3L + 16589729 16589847 stop_codon l(3)73Ah FlyBase G23376.1 GGATCCGCCGCTTCGGCTGCAGTTTCGTCCGCGGGTCGAGCTCTAACCACTGTTTTAGTATAATGCCACAACAAATGATCTATTTTTATAATTTATTGACAATGCGTAAATATCGTAAT 98 16589804 0.91403582 13 93 817 0.922535211 2.117271296 0.014084507 0.346938776 0.549295775 98 11 0 131 3L:16589729-16589847 6 106.5 1898 FBgn0002283 168.7966667 15.21333333 23.25333333 0.63093663 7.000438212 4.579988532 0 0 0 0.15 dme-miR-184-5p 6mer3-8 TGATAA 3L 16613454 16613459 - 3L_16613454_16613459_- 0.994854223 0.999999952 0.997427087 0.00363863 Mo25 FBtr0075358 16613216 16614149 3L - 16613404 16613498 3'utr Mo25 FlyBase G37362.1 GAAAACTAAATACTGCATAAAAATAATAATAATTCATAGTGATAATTGTCTGTGCATCCTTCGGCATGGACTCTACTATATATACACTGATATAT 16 16613453 0.993852154 10 12 137 0.75 0.77815125 0.125 0 0 16 3 1 12 3L:16613404-16613498 6 Mo25 FBtr0075358 16613216 16614149 TGATAA 6mer3-8 dme-miR-184-5p 3L - 16613440 16613471 3'utr Mo25 FlyBase G28215.1 AATAATTCATAGTGATAATTGTCTGTGCATCC 6 16613466 0.885110658 5 6 47 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3L:16613440-16613471 6 7 1899 FBgn0017572 1422.476667 76.83666667 118.16 0.004920995 0.091102338 0.059241706 -6 7 0.5 0.15 dme-bantam-3p 6mer3-8 TGATCT 3L 16616544 16616549 - 3L_16616544_16616549_- 0.942160336 0.996692265 0.9694263 0.038559947 Abl FBtr0345369|FBtr0112790 16615864|16615864 16622773|16622773 3L - 16616516 16616563 3'utr Abl FlyBase G37369.2 TATGTCTATGATCATGATCTATATGTGCTCGGCGTAACCATTGCATAC 14 16616549 0.788815173 5 13 111 0.944444444 1.230448921 0.166666667 0.214285714 0.388888889 14 1 0 17 3L:16616516-16616563 6 Abl FBtr0345369|FBtr0112790 16615864|16615864 16622773|16622773 TGATCT 6mer3-8 dme-bantam-3p 3L - 16616514 16616565 3'utr Abl FlyBase G28219.1 TATATGTCTATGATCATGATCTATATGTGCTCGGCGTAACCATTGCATACAC 11 16616549 0.985251883 4 11 90 1 1.204119983 0 0.363636364 0.5625 11 0 0 16 3L:16616514-16616565 6 11 1900 FBgn0000017 169917.41 1653.646667 2554.62 6.47E-05 0.006651965 0.004305924 0 0 0 0.15 dme-miR-252-5p 6mer3-8 GTACTT 3L 16649304 16649309 - 3L_16649304_16649309_- 0.999998971 0.999956074 0.999977523 3.03E-05 Baldspot FBtr0075355|FBtr0075356 16648440|16648839 16650074|16650074 3L - 16649294 16649329 3'utr Baldspot FlyBase G37413.1 AGTTGGGGTCTGAGAACTTTGTACTTCTAAGTCTAT 10 16649309 0.670045333 4 10 86 1 1.079181246 0.166666667 0.2 0.333333333 10 0 0 12 3L:16649294-16649329 6 Baldspot FBtr0075356|FBtr0075355 16648839|16648440 16650074|16650074 GTACTT 6mer3-8 dme-miR-252-5p 3L - 16649292 16649329 3'utr Baldspot FlyBase G28254.1 AGTTGGGGTCTGAGAACTTTGTACTTCTAAGTCTATAC 6 16649309 0.984309826 5 6 46 1 0.954242509 0.333333333 0.5 0.666666667 6 0 0 9 3L:16649292-16649329 6 7 1901 FBgn0260960 2360.606667 103.09 158.2033333 0.002965339 0.067901833 0.044246855 0 0 0 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 16649828 16649833 - 3L_16649828_16649833_- 0.999992226 0.683357404 0.841674815 0.223894614 Baldspot FBtr0075355|FBtr0075356 16648440|16648839 16650074|16650074 3L - 16649815 16649965 3'utr Baldspot FlyBase G37417.1 CCTGGGTGGCACACGACCGGTCGGATGAGAGTTTAATTTTGTAAGCCAAAAGTTGTACCGTGTGGACAGGCGTACGAACCATATATCTGAACATGTATATAAAAGAAGAAAAAAACAGACGAACCTAAGCTAACCAAAACTCAGAGTCGAG 12 16649837 0.923792939 9 12 51 1 1.079181246 0.25 0 0 12 0 0 12 3L:16649815-16649965 6 Baldspot FBtr0075356|FBtr0075355 16648839|16648440 16650074|16650074 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 16649769 16649849 3'utr Baldspot FlyBase G28256.1 AGACGAACCTAAGCTAACCAAAACTCAGAGTCGAGTCAGAATAAACTCTATGTAATTGAGGGGCAAAGAAGCGAGCGCATG 7 16649837 0.926931711 6 6 25 0.75 0.77815125 0 0.142857143 0.25 7 2 0 6 3L:16649769-16649849 6 3.5 1902 FBgn0260960 2360.606667 103.09 158.2033333 0.00148267 0.033950917 0.022123428 4 4 4 0.15 dme-bantam-3p 6mer3-8 TGATCT 3L 16662769 16662774 - 3L_16662769_16662774_- 0.911836888 0.92956317 0.920700029 0.012534387 Galphaf FBtr0075354 16662555 16662848 3L - 16662758 16662796 3'utr Galphaf FlyBase G37424.1 GTCCTCAGGCCCCCACCAACTGTGATCTAGTAGGATATG 17 16662769 0.938051367 3 17 68 1 1.342422681 0.318181818 0.294117647 0.454545455 17 0 0 22 3L:16662758-16662796 6 Galphaf FBtr0075354 16662555 16662848 TGATCT 6mer3-8 dme-bantam-3p 3L - 16662763 16662790 3'utr Galphaf FlyBase G28261.1 AGGCCCCCACCAACTGTGATCTAGTAGG 6 16662769 0.92378564 3 6 21 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 3L:16662763-16662790 6 11.5 1903 FBgn0010223 69.33333333 4.69 7.25 0.165865385 2.452025586 1.586206897 -5 -5 -5 0.15 dme-miR-252-5p 6mer3-8 GTACTT 3L 16672363 16672368 - 3L_16672363_16672368_- 0.999999999 0.994814856 0.997407428 0.003666419 zetaCOP FBtr0075353 16671937 16672420 3L - 16672353 16672454 lincRNA_exon-lincRNA_intron zetaCOP FlyBase G37429.1 GGTAACTAACACCCTTAATGGTCTATTTTGGTAGTCTAACTACTTGGTAGCTCTTCTAAGTGTTTATAACTCAATGGTAGCCGTTTGTACTTTAATTTTGTC 28 16672380 0.988376901 11 26 263 0.935483871 1.462397998 0.096774194 0.107142857 0.193548387 28 2 0 29 3L:16672353-16672454 6 zetaCOP FBtr0075353 16671937 16672420 GTACTT 6mer3-8 dme-miR-252-5p 3L - 16672342 16672397 3'utr zetaCOP FlyBase G28266.1 AAGTGTTTATAACTCAATGGTAGCCGTTTGTACTTTAATTTTGTCTGGTTTCGTTT 10 16672380 0.986322987 4 10 92 1 1.041392685 0 0.1 0.181818182 10 0 0 11 3L:16672342-16672397 6 13 1904 FBgn0040512 644 115.9 176.2033333 0.020186335 0.11216566 0.0737784 12 12 12 0.15 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3L 16723835 16723842 + 3L_16723835_16723842_+ 0.631126751 0.631136484 0.631131617 6.86E-06 Dab FBtr0305085|FBtr0305084|FBtr0333625|FBtr0330190|FBtr0305086|FBtr0333626|FBtr0330189|FBtr0075318 16723340|16723340|16723340|16723748|16723340|16723340|16723748|16723340 16724415|16724415|16724415|16724415|16724415|16724415|16724415|16724575 3L + 16723821 16723847 3'utr Dab FlyBase G30935.1 ATTCGCCACATATATCTAGTCAACTCA 13 16723833 0.711802589 3 13 81 1 1.255272505 0 0.307692308 0.5 13 0 0 18 3L:16723821-16723847 8 Dab FBtr0330189|FBtr0075318|FBtr0305086|FBtr0333626|FBtr0333625|FBtr0330190|FBtr0305085|FBtr0305084 16723748|16723340|16723340|16723340|16723340|16723748|16723340|16723340 16724415|16724575|16724415|16724415|16724415|16724415|16724415|16724415 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L + 16723811 16723850 3'utr Dab FlyBase G23405.1 ACGATATTTAATTCGCCACATATATCTAGTCAACTCAATC 6 16723834 0.97049004 4 6 41 1 1 0 0.5 0.7 6 0 0 10 3L:16723811-16723850 8 9.5 1905 FBgn0000414 579.9766667 8.573333333 13.19 0.016379969 1.108087092 0.720242608 2 1 1.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 16777524 16777529 - 3L_16777524_16777529_- 0.947745457 0.996706591 0.972226024 0.034620726 CG13025 FBtr0333610|FBtr0333610|FBtr0333610|FBtr0075346|FBtr0075346|FBtr0075346 16777447|16777447|16777447|16776529|16776529|16776529 16777593|16777593|16777593|16777593|16777593|16777593 3L - 16777487 16777539 3'utr CG13025 FlyBase G37456.1 TAGCTAATTTCTGTGAAATATGTGACTACTGATATAAACGAGCTTTTAAGCTA 14 16777531 0.721034062 7 10 108 0.777777778 1.146128036 0.222222222 0.214285714 0.388888889 14 4 0 14 3L:16777487-16777539 6 CG13025 FBtr0075346|FBtr0075346|FBtr0075346|FBtr0333610|FBtr0333610|FBtr0333610 16776529|16776529|16776529|16777447|16777447|16777447 16777593|16777593|16777593|16777593|16777593|16777593 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 16777483 16777543 3'utr CG13025 FlyBase G28288.1 CTTTTAGCTAATTTCTGTGAAATATGTGACTACTGATATAAACGAGCTTTTAAGCTAAGTT 22 16777531 0.684653915 8 21 183 0.962962963 1.113943352 0.222222222 0.227272727 0.37037037 22 0 1 26 3L:16777483-16777543 6 14 1906 FBgn0036660 194.1566667 10.47 16.01333333 0.072106718 1.337153773 0.87427144 2 2 2 0.15 dme-miR-263a-5p 6mer2-7 TGCCAT 3L 16782073 16782078 + 3L_16782073_16782078_+ 0.972066939 0.995929456 0.983998197 0.016873406 CG9705 FBtr0333607|FBtr0075325|FBtr0075324 16781837|16781837|16781837 16782419|16782419|16782419 3L + 16782030 16782191 3'utr CG9705 FlyBase G30940.1 AGCCGAAACCAGACCAGAACGTAATAGAATGGAACAACAGGCCTGCCATCCAGCCAGCCAGCGAGCAGCATCACAAGAGTTTCAATTGAACACTTAATTAGAATTTAAGCTAAGCTATGGAAGTCAAACAAAACGCAGTCACAAATATTGCCTTTCCCTCTG 43 16782073 0.942980018 12 41 168 0.960784314 1.69019608 0.254901961 0.186046512 0.31372549 43 2 0 49 3L:16782030-16782191 6 CG9705 FBtr0075325|FBtr0075324|FBtr0333607 16781837|16781837|16781837 16782419|16782419|16782419 TGCCAT 6mer2-7 dme-miR-263a-5p 3L + 16782040 16782098 3'utr CG9705 FlyBase G23411.1 AGACCAGAACGTAATAGAATGGAACAACAGGCCTGCCATCCAGCCAGCCAGCGAGCAGC 18 16782073 0.825946531 3 18 22 1 1.591064607 0.384615385 0.611111111 0.820512821 18 0 0 39 3L:16782040-16782098 6 20.5 1907 FBgn0036661 2532.823333 208.9866667 321.3 0.008093735 0.098092382 0.063803299 0 0 0 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 16782352 16782358 + 3L_16782352_16782358_+ 0.656075466 0.65679 0.656432733 0.000505228 CG9705 FBtr0333607|FBtr0075325|FBtr0075324 16781837|16781837|16781837 16782419|16782419|16782419 3L + 16782329 16782433 3'utr CG9705 FlyBase G30941.2 TTAATTATAACAAAACATCTGAATGTGTTCGCGAAGCAAACAAGCAAAATGCTCTCAGTAATTCACTTTATTATTAAAACAGCTGCAAAACAATTCCATCGGTGA 47 16782352 0.97443808 7 42 255 0.942307692 1.69019608 0.288461538 0.106382979 0.192307692 47 3 0 49 3L:16782329-16782433 7 CG9705 FBtr0075325|FBtr0075324|FBtr0333607 16781837|16781837|16781837 16782419|16782419|16782419 TGTGTTC 7mer-m8 dme-miR-317-3p 3L + 16782331 16782366 3'utr CG9705 FlyBase G23413.1 AATTATAACAAAACATCTGAATGTGTTCGCGAAGCA 21 16782352 0.741387901 3 17 107 0.862068966 0.920818754 0.172413793 0.333333333 0.517241379 21 2 2 25 3L:16782331-16782366 7 29 1908 FBgn0036661 2532.823333 208.9866667 321.3 0.011449673 0.138764833 0.090258326 0 0 0 0.15 dme-miR-277-3p 6mer3-8 TGCATT 3L 16785143 16785148 + 3L_16785143_16785148_+ 0.999999982 0.999999998 0.99999999 0 CG9706 FBtr0075326|FBtr0075327 16785050|16785050 16785246|16785246 3L + 16785114 16785192 3'utr CG9706 FlyBase G30945.1 AACAACTAATTCTAGGATTAGCAGACGTTTGCATTCTGTAGGCTAGCGAAATTACAAATTCCCGCCTTGGTATTGTTTT 23 16785150 0.957349062 8 23 165 1 1.477121255 0.033333333 0.304347826 0.466666667 23 0 0 30 3L:16785114-16785192 6 CG9706 FBtr0075326|FBtr0075327 16785050|16785050 16785246|16785246 TGCATT 6mer3-8 dme-miR-277-3p 3L + 16785121 16785164 3'utr CG9706 FlyBase G23415.1 AATTCTAGGATTAGCAGACGTTTGCATTCTGTAGGCTAGCGAAA 9 16785142 0.974375068 3 9 61 1 1.204119983 0.375 0.555555556 0.75 9 0 0 16 3L:16785121-16785164 6 12.5 1909 FBgn0036662 379.6666667 23.33333333 36.06666667 0.032923617 0.535714286 0.346580407 -7 1 -3 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 16787755 16787760 - 3L_16787755_16787760_- 0.830527452 0.867588446 0.849057949 0.026206014 CG9674 FBtr0345074|FBtr0305916|FBtr0333608|FBtr0075344 16787571|16787571|16787571|16787571 16792436|16788409|16788409|16788409 3L - 16787738 16787788 3'utr CG9674 FlyBase G37476.1 GAACTGCATTCGACCGTTGACCGCAAATGTACCTAAGTGGCTATTGTTAAA 107 16787761 0.90662833 2 105 620 0.983870968 1.785329835 0.282258065 0.14953271 0.266129032 107 1 1 122 3L:16787738-16787788 6 CG9674 FBtr0075344|FBtr0305916|FBtr0333608|FBtr0345074 16787571|16787571|16787571|16787571 16788409|16788409|16788409|16792436 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L - 16787734 16787781 3'utr CG9674 FlyBase G28306.1 ATTCGACCGTTGACCGCAAATGTACCTAAGTGGCTATTGTTAAAACAA 43 16787761 0.894103356 2 42 230 0.986111111 1.851258349 0.291666667 0.441860465 0.666666667 43 1 0 71 3L:16787734-16787781 6 75 1910 FBgn0036663 1912.666667 32.48 50.08 0.039212269 2.3091133 1.497603834 1 1 1 0.15 dme-bantam-3p 7mer-m8 TGATCTC 3L 16787891 16787897 - 3L_16787891_16787897_- 0.654528648 0.656561144 0.655544896 0.001437195 CG9674 FBtr0345074|FBtr0305916|FBtr0333608|FBtr0075344 16787571|16787571|16787571|16787571 16792436|16788409|16788409|16788409 3L - 16787882 16787909 3'utr CG9674 FlyBase G37477.1 AAATTGATATGCTGATCTCCACCATCCT 15 16787898 0.690610132 4 12 90 0.909090909 1.301029996 0.454545455 0.2 0.454545455 15 2 0 20 3L:16787882-16787909 7 CG9674 FBtr0075344|FBtr0305916|FBtr0333608|FBtr0345074 16787571|16787571|16787571|16787571 16788409|16788409|16788409|16792436 TGATCTC 7mer-m8 dme-bantam-3p 3L - 16787882 16787911 3'utr CG9674 FlyBase G28307.1 GAAAATTGATATGCTGATCTCCACCATCCT 13 16787897 0.718071018 3 11 75 0.764705882 0.636822098 0.529411765 0.307692308 0.470588235 13 2 2 13 3L:16787882-16787911 7 14 1911 FBgn0036663 1912.666667 32.48 50.08 0.007319624 0.431034483 0.279552716 1 0 0.5 0.15 dme-miR-8-3p 6mer3-8 CAGTAT 3L 16789590 16789595 - 3L_16789590_16789595_- 0.999999998 0.999999848 0.999999923 1.41E-07 CG9674 FBtr0345074|FBtr0333609|FBtr0305915 16787571|16788247|16788247 16792436|16792331|16792331 3L - 16789574 16789622 5'utr CG9674 FlyBase G37486.1 CGCAACGATCGCGTTGGTGGACTTTTGCAGTATGGTATTCCCACGATGA 11 16789606 0.851354766 6 11 78 1 1.230448921 0.294117647 0.454545455 0.647058824 11 0 0 17 3L:16789574-16789622 6 CG9674 FBtr0333609|FBtr0305915|FBtr0345074 16788247|16788247|16787571 16792331|16792331|16792436 CAGTAT 6mer3-8 dme-miR-8-3p 3L - 16789554 16789625 5'utr CG9674 FlyBase G28311.1 GAGCGCAACGATCGCGTTGGTGGACTTTTGCAGTATGGTATTCCCACGATGAAGCTTTCCAAGGAGGTGGTC 7 16789598 0.983758966 4 7 55 1 1.113943352 0.384615385 0.428571429 0.692307692 7 0 0 13 3L:16789554-16789625 6 5.5 1912 FBgn0036663 1912.666667 32.48 50.08 0.002875566 0.169334975 0.109824281 11 3 7 0.15 dme-miR-307a-3p 7mer-m8 GGTTGTG 3L 16791639 16791645 - 3L_16791639_16791645_- 0.530422202 0.702490808 0.616456505 0.121670874 CG9674 FBtr0345074|FBtr0333609|FBtr0305915 16787571|16788247|16788247 16792436|16792331|16792331 3L - 16791617 16791691 intron-5'utr CG9674 FlyBase G37491.1 GTGTGATTGTTCAGGCTGATGGACAGCTCCGCACAGGATTCGATGTGGTTGTGGCTGCACTGCTGGGTGCTGATG 12 16791642 0.972398425 9 12 76 1 1.146128036 0.214285714 0.166666667 0.285714286 12 0 0 14 3L:16791617-16791691 7 CG9674 FBtr0333609|FBtr0305915|FBtr0345074 16788247|16788247|16787571 16792331|16792331|16792436 GGTTGTG 7mer-m8 dme-miR-307a-3p 3L - 16791630 16791660 5'utr CG9674 FlyBase G28316.1 CACAGGATTCGATGTGGTTGTGGCTGCACTG 8 16791646 0.693964738 4 8 53 1 1.146128036 0.571428571 0.5 0.714285714 8 0 0 14 3L:16791630-16791660 7 7.5 1913 FBgn0036663 1912.666667 32.48 50.08 0.003921227 0.23091133 0.149760383 -3 1 -1 0.15 dme-miR-1003-3p 6mer2-7 TGTGAG 3L 16857476 16857481 + 3L_16857476_16857481_+ 0.996133615 0.990282961 0.993208288 0.004136999 sina FBtr0075333|FBtr0075332|FBtr0344230 16857361|16857361|16857361 16858712|16858712|16858712 3L + 16857453 16857501 3'utr sina FlyBase G30993.2 AGGCGTCTAACTCGTGGACAGATTGTGAGTCTGGAGATTAAGAAGAAAG 24 16857477 0.676598129 7 22 117 1 1.462397998 0.551724138 0.166666667 0.310344828 24 0 0 29 3L:16857453-16857501 6 sina FBtr0075333|FBtr0075332|FBtr0344230 16857361|16857361|16857361 16858712|16858712|16858712 TGTGAG 6mer2-7 dme-miR-1003-3p 3L + 16857429 16857519 3'utr sina FlyBase G23452.1 AGTTTATAGCCCTCTGTTCGCATCAGGCGTCTAACTCGTGGACAGATTGTGAGTCTGGAGATTAAGAAGAAAGAGTTTTGCAGAGTTGTTT 23 16857477 0.969975085 8 23 135 1 1.544068044 0.485714286 0.347826087 0.571428571 23 0 0 35 3L:16857429-16857519 6 19 1914 FBgn0003410 433.1466667 16.57 25.46666667 0.04386505 1.146650573 0.746073298 -1 -1 -1 0.15 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 16994830 16994836 - 3L_16994830_16994836_- 0.822716778 0.823258394 0.822987586 0.000382969 CG3764 FBtr0321285|FBtr0075297|FBtr0332122 16994715|16994715|16994715 16995408|16995408|16995408 3L - 16994823 16994858 3'utr CG3764 FlyBase G37507.1 AAGTTTAGAATACGCTAGGGATGCAGCTACTAAAAT 35 16994837 0.819794337 4 32 162 0.925 0.966141733 0.225 0.114285714 0.225 35 0 3 37 3L:16994823-16994858 7 CG3764 FBtr0332122|FBtr0321285|FBtr0075297 16994715|16994715|16994715 16995408|16995408|16995408 GCAGCTA 7mer-A1 dme-miR-980-3p 3L - 16994823 16994858 3'utr CG3764 FlyBase G28331.1 AAGTTTAGAATACGCTAGGGATGCAGCTACTAAAAT 29 16994837 0.797038955 4 26 112 0.930232558 1.301029996 0.11627907 0.379310345 0.581395349 29 2 1 40 3L:16994823-16994858 7 31.5 1915 FBgn0036684 919.4833333 18.43 28.02333333 0.03425837 1.709169832 1.124063281 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 16995271 16995277 - 3L_16995271_16995277_- 0.798612956 0.797625439 0.798119198 0.000698339 CG3764 FBtr0321285|FBtr0321285|FBtr0321285|FBtr0075297|FBtr0075297|FBtr0075297|FBtr0332122|FBtr0332122|FBtr0332122 16994715|16994715|16994715|16994715|16994715|16994715|16994715|16994715|16994715 16995408|16995408|16995408|16995408|16995408|16995408|16995408|16995408|16995408 3L - 16995191 16995444 stop_codon CG3764 FlyBase G37509.2 AAGATCAGCCGCAAGTGCGGCATCAGCTTCAGGTGACAGGTTGTTGCCGTCTGCTGAGCTAGGACATTGCCAAACATTTTATCACTCAACGTTTCAAAGAGCTCTTCTCATGCATCATCCAAAGCGAAACAAGCAAATACTCCAGCGAATTTTAATTTCACTGATTTTGTGATATATTTATATATGTGTAGGAATCTAGCGCCTAAATGCAGGATACGTTTATGAGCCGTAGCTTAGCCGTAGCCCTCGAACGA 438 16995279 0.941714361 46 399 4122 0.914342629 1.457692703 0.109561753 0.116438356 0.229083665 438 28 15 459 3L:16995191-16995444 7 CG3764 FBtr0332122|FBtr0332122|FBtr0332122|FBtr0321285|FBtr0321285|FBtr0321285|FBtr0075297|FBtr0075297|FBtr0075297 16994715|16994715|16994715|16994715|16994715|16994715|16994715|16994715|16994715 16995408|16995408|16995408|16995408|16995408|16995408|16995408|16995408|16995408 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 16995196 16995461 stop_codon CG3764 FlyBase G28333.2 CATATATTCACACGCCCAAGATCAGCCGCAAGTGCGGCATCAGCTTCAGGTGACAGGTTGTTGCCGTCTGCTGAGCTAGGACATTGCCAAACATTTTATCACTCAACGTTTCAAAGAGCTCTTCTCATGCATCATCCAAAGCGAAACAAGCAAATACTCCAGCGAATTTTAATTTCACTGATTTTGTGATATATTTATATATGTGTAGGAATCTAGCGCCTAAATGCAGGATACGTTTATGAGCCGTAGCTTAGCCGTAGCCCTCG 313 16995279 0.989109754 38 262 2654 0.856275304 1.450249108 0.133603239 0.38658147 0.611336032 313 57 14 423 3L:16995196-16995461 7 193.5 1916 FBgn0036684 919.4833333 18.43 28.02333333 0.210444271 10.49918611 6.904960152 2 2 2 0.15 dme-miR-2a-2-5p 7mer-A1 GATGAGA 3L 17013051 17013057 - 3L_17013051_17013057_- 0.742416667 0.742536583 0.742476625 8.48E-05 CG6664 FBtr0075293|FBtr0075294|FBtr0075295 17012884|17012884|17012884 17013449|17013449|17013449 3L - 17013025 17013092 3'utr CG6664 FlyBase G37540.1 AACACAGCTAATAATGAGATATGGAGGATATAGAGGATGAGAATGAGGATGGACAGCACACGCTAACC 32 17013055 0.953035123 4 30 135 0.942857143 1.51851394 0.114285714 0.09375 0.171428571 32 2 0 33 3L:17013025-17013092 7 CG6664 FBtr0075294|FBtr0075295|FBtr0075293 17012884|17012884|17012884 17013449|17013449|17013449 GATGAGA 7mer-A1 dme-miR-2a-2-5p 3L - 17013006 17013077 3'utr CG6664 FlyBase G28354.1 GAGATATGGAGGATATAGAGGATGAGAATGAGGATGGACAGCACACGCTAACCAGATCGTATGAATTTATAA 32 17013055 0.937619131 4 31 122 0.960784314 1.69019608 0.31372549 0.46875 0.666666667 32 2 0 49 3L:17013006-17013077 7 30.5 1917 FBgn0036685 1328.326667 65.44 100.8833333 0.022961219 0.466075795 0.302329423 -2 -2 -2 0.15 dme-bantam-3p 6mer2-7 GATCTC 3L 17037468 17037473 - 3L_17037468_17037473_- 0.999816067 0.999984233 0.99990015 0.000118865 scaf6 FBtr0345067 17036857 17039577 3L - 17037447 17037486 5'utr scaf6 FlyBase G37552.1 AAGGGTCGCAATCGATCTCCTCGCCACGAACGGGACAACA 6 17037466 0.940005926 2 6 24 1 0.77815125 0.166666667 0 0 6 0 0 6 3L:17037447-17037486 6 scaf6 FBtr0345067 17036857 17039577 GATCTC 6mer2-7 dme-bantam-3p 3L - 17037455 17037496 5'utr scaf6 FlyBase G28362.1 TAACAACCGCAAGGGTCGCAATCGATCTCCTCGCCACGAACG 6 17037475 0.937522995 3 6 24 1 0.903089987 0.5 0.333333333 0.5 6 0 0 8 3L:17037455-17037496 6 6 1918 FBgn0261872 719.3333333 34.71333333 53.11 0.008341057 0.172844248 0.112973075 -7 2 -2.5 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3L 17041316 17041322 - 3L_17041316_17041322_- 0.822048418 0.823252631 0.822650524 0.000851498 scaf6 FBtr0301554 17040932 17041684 3L - 17041291 17041347 5'utr scaf6 FlyBase G37556.1 ATATACTTTCGGACTTAAATGATTTCCAAAGATATTGTCATAGACTCATAGATGGCA 6 17041324 0.98004601 3 6 48 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3L:17041291-17041347 7 scaf6 FBtr0301554 17040932 17041684 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 17041292 17041338 5'utr scaf6 FlyBase G28366.1 CGGACTTAAATGATTTCCAAAGATATTGTCATAGACTCATAGATGGC 10 17041324 0.753904865 4 10 71 1 1.041392685 0 0.1 0.181818182 10 0 0 11 3L:17041292-17041338 7 7 1919 FBgn0261872 719.3333333 34.71333333 53.11 0.009731233 0.201651623 0.131801921 2 2 2 0.15 dme-miR-932-5p 7mer-A1 GAATTGA 3L 17054769 17054775 + 3L_17054769_17054775_+ 0.823348338 0.823348545 0.823348441 1.41E-07 rogdi FBtr0075282|FBtr0075283 17054365|17054365 17055454|17055454 3L + 17054726 17054822 3'utr rogdi FlyBase G31086.1 CTCCAATTATGCATCAAAATGCATCTAAATAGCATTAGGCTGAGAATTGAGAACAGAGAACGTTTGTGAAAACCAATTGTGTTTGTATGTGTAACAA 53 17054760 0.927686308 10 53 244 1 1.806179974 0.265625 0.132075472 0.28125 53 0 0 64 3L:17054726-17054822 7 rogdi FBtr0075283|FBtr0075282 17054365|17054365 17055454|17055454 GAATTGA 7mer-A1 dme-miR-932-5p 3L + 17054746 17054821 3'utr rogdi FlyBase G23516.1 GCATCTAAATAGCATTAGGCTGAGAATTGAGAACAGAGAACGTTTGTGAAAACCAATTGTGTTTGTATGTGTAACA 36 17054772 0.688269252 8 35 150 1 1.77815125 0.133333333 0.444444444 0.666666667 36 0 0 60 3L:17054746-17054821 7 35 1920 FBgn0036697 653.9633333 39.12 59.84 0.05351982 0.894683027 0.584893048 9 -3 3 0.15 dme-miR-252-5p 7mer-m8 GTACTTA 3L 17055319 17055325 + 3L_17055319_17055325_+ 0.588236675 0.588238316 0.588237496 1.13E-06 rogdi FBtr0075282|FBtr0075283 17054365|17054365 17055454|17055454 3L + 17055306 17055331 3'utr rogdi FlyBase G31088.1 AACAATTACCACTGTACTTATTGAAT 8 17055318 0.7761632 3 8 58 1 1.041392685 0 0.375 0.545454545 8 0 0 11 3L:17055306-17055331 7 rogdi FBtr0075283|FBtr0075282 17054365|17054365 17055454|17055454 GTACTTA 7mer-m8 dme-miR-252-5p 3L + 17055299 17055328 3'utr rogdi FlyBase G23518.1 CAACGAAAACAATTACCACTGTACTTATTG 8 17055318 0.96245563 3 7 52 0.909090909 1 0.636363636 0.25 0.454545455 8 1 0 10 3L:17055299-17055328 7 8 1921 FBgn0036697 653.9633333 39.12 59.84 0.012233102 0.204498978 0.13368984 1 1 1 0.15 dme-miR-276a-3p 6mer3-8 AGTTCC 3L 1716321 1716326 - 3L_1716321_1716326_- 0.986859179 0.987286231 0.987072705 0.000301935 drpr FBtr0334080|FBtr0309845 1715593|1715708 1716704|1716704 3L - 1716305 1716359 3'utr drpr FlyBase G33460.1 ACCAACCTGGACAACGTGTCGACGGCGTCGCCTAGTTCCAGTCCGAAATTTCTAA 7 1716324 0.9526497 4 7 32 1 1 0 0.428571429 0.6 7 0 0 10 3L:1716305-1716359 6 drpr FBtr0309845|FBtr0334080 1715708|1715593 1716704|1716704 AGTTCC 6mer3-8 dme-miR-276a-3p 3L - 1716313 1716345 3'utr drpr FlyBase G25308.1 CGTGTCGACGGCGTCGCCTAGTTCCAGTCCGAA 5 1716324 0.739953545 2 5 26 1 0.84509804 0.285714286 0.2 0.428571429 5 0 0 7 3L:1716313-1716345 6 5 1922 FBgn0027594 1820.973333 52.11666667 79.25333333 0.002745784 0.095938599 0.063088829 -2 -2 -2 0.15 dme-miR-283-5p 8mer-m1 TGATATTT 3L 174070 174077 + 3L_174070_174077_+ 0.514726268 0.497342211 0.50603424 0.012292415 p130CAS FBtr0299866|FBtr0072475|FBtr0299864|FBtr0299865|FBtr0301889 173907|173907|173907|173907|173907 174517|174517|174517|174517|174517 3L + 174048 174092 3'utr p130CAS FlyBase G26680.1 TTGCCGCTTATATTTTGCATTGTGATATTTTGAGCAAAACATCTG 23 174067 0.988120099 9 20 254 0.891891892 1.041392685 0.054054054 0.347826087 0.594594595 23 2 2 33 3L:174048-174092 8 p130CAS FBtr0299865|FBtr0299864|FBtr0072475|FBtr0299866|FBtr0301889 173907|173907|173907|173907|173907 174517|174517|174517|174517|174517 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 174049 174086 3'utr p130CAS FlyBase G20176.1 TGCCGCTTATATTTTGCATTGTGATATTTTGAGCAAAA 16 174066 0.664186215 5 14 176 0.769230769 0.823908741 0.269230769 0.4375 0.653846154 16 4 2 20 3L:174049-174086 8 19.5 1923 FBgn0035101 655.3333333 27.27 41.73 0.029755849 0.715071507 0.46728972 3 4 3.5 0.15 dme-miR-184-5p 8mer-m1 TGATAAGG 3L 17429142 17429149 - 3L_17429142_17429149_- 0.611717888 0.60864981 0.610183849 0.002169474 frc FBtr0299820 17428934 17431853 3L - 17429122 17429175 stop_codon frc FlyBase G37592.1 TGGGCATTACTGTGCTGAATAAAGCTTGATAAGGCTGTTTATTTTTAAGCCCAT 36 17429146 0.991150602 4 34 364 0.948717949 1.091080469 0.102564103 0.055555556 0.128205128 36 0 2 37 3L:17429122-17429175 8 frc FBtr0299820 17428934 17431853 TGATAAGG 8mer-m1 dme-miR-184-5p 3L - 17429124 17429165 stop_codon frc FlyBase G28385.1 TGTGCTGAATAAAGCTTGATAAGGCTGTTTATTTTTAAGCCC 10 17429146 0.883782039 3 10 93 1 1.204119983 0.125 0.4 0.625 10 0 0 16 3L:17429124-17429165 8 22 1924 FBgn0042641 378.7 26.37333333 40.25 0.058093478 0.834175935 0.546583851 -3 -3 -3 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 17431536 17431542 - 3L_17431536_17431542_- 0.544258775 0.660041694 0.602150234 0.081870874 frc FBtr0299820 17428934 17431853 3L - 17431520 17431606 5'utr frc FlyBase G37593.1 AAGAAATAGAAATACACAGACTTCCACTCCTCCGCCTACGGAATGGGTGGGCCAGATAAACAATTGTGTTCCGTCTTCTGTTCCATT 53 17431563 0.883225139 10 49 258 0.935483871 1.286306739 0.064516129 0.132075472 0.258064516 53 2 2 58 3L:17431520-17431606 7 frc FBtr0299820 17428934 17431853 TGTGTTC 7mer-m8 dme-miR-317-3p 3L - 17431525 17431606 5'utr frc FlyBase G28386.1 AAGAAATAGAAATACACAGACTTCCACTCCTCCGCCTACGGAATGGGTGGGCCAGATAAACAATTGTGTTCCGTCTTCTGTT 35 17431543 0.852131848 9 31 184 0.883333333 1.423245874 0.05 0.485714286 0.7 35 6 1 53 3L:17431525-17431606 7 10 1925 FBgn0042641 378.7 26.37333333 40.25 0.026406126 0.37917088 0.248447205 21 1 11 0.15 dme-miR-970-3p 8mer-A1 TCTTATGA 3L 17477817 17477824 - 3L_17477817_17477824_- 0.630740311 0.630747014 0.630743662 4.74E-06 CG13733 FBtr0075225 17477793 17477948 3L - 17477810 17477841 3'utr CG13733 FlyBase G37602.1 ACATACATATATAGATCTCTTATGAACAGTAA 30 17477822 0.702536344 4 30 224 1 1.633468456 0 0.266666667 0.488372093 30 0 0 43 3L:17477810-17477841 8 CG13733 FBtr0075225 17477793 17477948 TCTTATGA 8mer-A1 dme-miR-970-3p 3L - 17477811 17477841 3'utr CG13733 FlyBase G28400.1 ACATACATATATAGATCTCTTATGAACAGTA 23 17477821 0.71618281 5 23 174 1 1.544068044 0 0.391304348 0.6 23 0 0 35 3L:17477811-17477841 8 26.5 1926 FBgn0036729 1.666666667 0.2 0.32 15.9 132.5 82.8125 -2 -3 -2.5 0.15 dme-miR-986-5p 6mer2-7 TTCGAG 3L 17511230 17511235 + 3L_17511230_17511235_+ 0.883186793 0.94995045 0.916568621 0.047208994 Oatp74D FBtr0075173|FBtr0345117|FBtr0345118|FBtr0302041 17511094|17511094|17511094|17511094 17511693|17511693|17511693|17511693 3L + 17511094 17511259 stop_codon Oatp74D FlyBase G31134.1 AGGAGGAGCGGGTCGGCGACGAGCCTTGCACAAGCTGCAGGATTTCCAATAAACGTTTACCTTAATTGTTAATTAGTTATCATTTGTCTAGTTTGTTAGCCTAGTGCAAGAGTTATGTATTTAGTTAAGTGGCATCTTCGAGCGTCGGGAGACCTCATTCAAATCC 43 17511251 0.909561965 16 38 309 0.901960784 1.662757832 0.254901961 0.162790698 0.294117647 43 5 0 46 3L:17511094-17511259 6 Oatp74D FBtr0302041|FBtr0345118|FBtr0345117|FBtr0075173 17511094|17511094|17511094|17511094 17511693|17511693|17511693|17511693 TTCGAG 6mer2-7 dme-miR-986-5p 3L + 17511208 17511254 3'utr Oatp74D FlyBase G23551.1 ATGTATTTAGTTAAGTGGCATCTTCGAGCGTCGGGAGACCTCATTCA 12 17511238 0.738013071 7 11 68 0.95 1.278753601 0.35 0.416666667 0.65 12 1 0 19 3L:17511208-17511254 6 14.5 1927 FBgn0036732 1106.486667 32.79 50.10666667 0.013104541 0.44220799 0.28938265 -21 -8 -14.5 0.15 dme-miR-92b-3p 6mer3-8 GTGCAA 3L 17511461 17511466 + 3L_17511461_17511466_+ 0.997361932 0.99705937 0.997210651 0.0002139 Oatp74D FBtr0075173|FBtr0345117|FBtr0345118|FBtr0302041 17511094|17511094|17511094|17511094 17511693|17511693|17511693|17511693 3L + 17511439 17511476 3'utr Oatp74D FlyBase G31136.1 TACTACAAACTGATCGACAATTGTGCAAAGTGCAAGAA 16 17511459 0.749004196 3 16 72 1 1.322219295 0.333333333 0.3125 0.476190476 16 0 0 21 3L:17511439-17511476 6 Oatp74D FBtr0302041|FBtr0345118|FBtr0345117|FBtr0075173 17511094|17511094|17511094|17511094 17511693|17511693|17511693|17511693 GTGCAA 6mer3-8 dme-miR-92b-3p 3L + 17511439 17511471 3'utr Oatp74D FlyBase G23553.1 TACTACAAACTGATCGACAATTGTGCAAAGTGC 16 17511459 0.729533522 2 14 79 0.884615385 1.06069784 0.807692308 0.4375 0.653846154 16 2 1 23 3L:17511439-17511471 6 15 1928 FBgn0036732 1106.486667 32.79 50.10666667 0.013556422 0.457456542 0.299361362 2 2 2 0.15 dme-miR-92b-3p 6mer3-8 GTGCAA 3L 17525937 17525942 - 3L_17525937_17525942_- 0.99852611 0.999093345 0.998809728 0.000401071 Edc3 FBtr0075208 17525331 17526958 3L - 17525921 17526032 3'utr Edc3 FlyBase G37610.1 CATCGAATACTAAAAAGAAACCACAACACAATACTTATAATATAAACTGTAGAGCGATTAATTTTATATAAGATTAAATCCAATCTAATAGTGCAAAATTTTAGAAGGTTGC 32 17525944 0.982202803 5 31 222 0.948717949 1.568201724 0 0.1875 0.333333333 32 2 0 37 3L:17525921-17526032 6 Edc3 FBtr0075208 17525331 17526958 GTGCAA 6mer3-8 dme-miR-92b-3p 3L - 17525919 17525985 3'utr Edc3 FlyBase G28407.1 TGTAGAGCGATTAATTTTATATAAGATTAAATCCAATCTAATAGTGCAAAATTTTAGAAGGTTGCGA 20 17525944 0.980601489 3 19 141 1 1.462397998 0 0.3 0.517241379 20 0 0 29 3L:17525919-17525985 6 21.5 1929 FBgn0036735 1377.103333 41.10333333 63.21333333 0.015612481 0.523071933 0.340118119 2 2 2 0.15 dme-miR-7-5p 6mer3-8 GTCTTC 3L 17526409 17526414 - 3L_17526409_17526414_- 0.999738175 0.999932188 0.999835181 0.000137179 Edc3 FBtr0075208 17525331 17526958 3L - 17526393 17526442 3'utr Edc3 FlyBase G37613.1 TTACAATTCACTGTCCTTCCTGCAAGTGGTCTTCATAATCGTAAACAACA 16 17526416 0.85685172 3 16 136 1 1.204119983 0 0 0 16 0 0 16 3L:17526393-17526442 6 Edc3 FBtr0075208 17525331 17526958 GTCTTC 6mer3-8 dme-miR-7-5p 3L - 17526390 17526445 3'utr Edc3 FlyBase G28410.1 AATTTACAATTCACTGTCCTTCCTGCAAGTGGTCTTCATAATCGTAAACAACAAAT 15 17526416 0.905317979 5 12 121 0.769230769 1.301029996 0.076923077 0.466666667 0.692307692 15 6 0 20 3L:17526390-17526445 6 13 1930 FBgn0036735 1377.103333 41.10333333 63.21333333 0.009440105 0.316276052 0.205652816 2 2 2 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 17526799 17526804 - 3L_17526799_17526804_- 0.998878032 0.999674271 0.999276151 0.000563069 Edc3 FBtr0075208|FBtr0075208|FBtr0075208 17525331|17525331|17525331 17526958|17526958|17526958 3L - 17526739 17526857 3'utr Edc3 FlyBase G37616.1 AACAATAACAATGACACACCCGCACACTTGTGATGATCATCAAGTCCAGTTTCCTGTGAATCTAGCTCTTAGTACTCTTCTCTCATATATTACTCAAGTTAAACATTTTGTTCTACGGC 151 17526829 0.986511311 23 133 1144 0.876344086 1.257945095 0.080645161 0.17218543 0.327956989 151 15 8 163 3L:17526739-17526857 6 Edc3 FBtr0075208|FBtr0075208|FBtr0075208 17525331|17525331|17525331 17526958|17526958|17526958 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 17526764 17526847 3'utr Edc3 FlyBase G28414.1 ATGACACACCCGCACACTTGTGATGATCATCAAGTCCAGTTTCCTGTGAATCTAGCTCTTAGTACTCTTCTCTCATATATTACT 110 17526808 0.796905252 19 99 883 0.911949686 1.207125493 0.100628931 0.345454545 0.547169811 110 6 8 145 3L:17526764-17526847 6 58 1931 FBgn0036735 1377.103333 41.10333333 63.21333333 0.042117391 1.411077771 0.917527948 25 4 14.5 0.15 dme-miR-2a-2-5p 6mer3-8 TGATGA 3L 17526822 17526827 - 3L_17526822_17526827_- 0.760380417 0.639621 0.700000708 0.085389791 Edc3 FBtr0075208 17525331 17526958 3L - 17526739 17526857 3'utr Edc3 FlyBase G37616.1 AACAATAACAATGACACACCCGCACACTTGTGATGATCATCAAGTCCAGTTTCCTGTGAATCTAGCTCTTAGTACTCTTCTCTCATATATTACTCAAGTTAAACATTTTGTTCTACGGC 151 17526829 0.986511311 23 133 1144 0.876344086 1.257945095 0.080645161 0.17218543 0.327956989 151 15 8 163 3L:17526739-17526857 6 Edc3 FBtr0075208 17525331 17526958 TGATGA 6mer3-8 dme-miR-2a-2-5p 3L - 17526764 17526847 3'utr Edc3 FlyBase G28414.1 ATGACACACCCGCACACTTGTGATGATCATCAAGTCCAGTTTCCTGTGAATCTAGCTCTTAGTACTCTTCTCTCATATATTACT 110 17526808 0.796905252 19 99 883 0.911949686 1.207125493 0.100628931 0.345454545 0.547169811 110 6 8 145 3L:17526764-17526847 6 51.5 1932 FBgn0036735 1377.103333 41.10333333 63.21333333 0.037397339 1.252939745 0.81470154 2 -19 -8.5 0.15 dme-miR-252-5p 7mer-m8 GTACTTA 3L 17545826 17545832 + 3L_17545826_17545832_+ 0.58829971 0.588299915 0.588299812 1.41E-07 Nedd4 FBtr0300520|FBtr0299642|FBtr0331843|FBtr0299647|FBtr0299645|FBtr0299648|FBtr0300519|FBtr0331844|FBtr0299646 17545609|17545609|17545609|17545609|17545609|17545609|17545609|17545609|17545609 17546376|17546376|17546376|17546376|17546376|17546376|17546660|17546376|17546376 3L + 17545812 17545897 3'utr Nedd4 FlyBase G31149.1 CGCCAGCAGATCGTGTACTTATTTGTTCGTTTGCTTTTGTATTATAATCATTTTTGCTAGTTTAGTGTTATTTCGTATGTATTTTA 23 17545825 0.991552874 9 19 214 0.892857143 0.920818754 0.142857143 0.173913043 0.321428571 23 1 2 25 3L:17545812-17545897 7 Nedd4 FBtr0299646|FBtr0331844|FBtr0300519|FBtr0299648|FBtr0299645|FBtr0299647|FBtr0331843|FBtr0299642|FBtr0300520 17545609|17545609|17545609|17545609|17545609|17545609|17545609|17545609|17545609 17546376|17546376|17546660|17546376|17546376|17546376|17546376|17546376|17546376 GTACTTA 7mer-m8 dme-miR-252-5p 3L + 17545811 17545847 3'utr Nedd4 FlyBase G23564.2 CCGCCAGCAGATCGTGTACTTATTTGTTCGTTTGCTT 21 17545833 0.648828154 6 17 172 0.787878788 0.716003344 0.121212121 0.333333333 0.575757576 21 3 4 26 3L:17545811-17545847 7 17.5 1933 FBgn0259174 1914.91 63.1 97.11 0.009138811 0.277337559 0.180208012 1 -7 -3 0.15 dme-miR-79-3p 7mer-m8 TAGCTTT 3L 17551897 17551903 - 3L_17551897_17551903_- 0.619604099 0.619775175 0.619689637 0.000120986 CycT FBtr0333125|FBtr0333124 17551002|17551002 17552803|17552803 3L - 17551882 17551923 3'utr CycT FlyBase G37630.1 GATCGCCTGGAACGTTGACGTAGCTTTCATTTGTTTTAATTT 13 17551903 0.782869023 7 12 113 0.923076923 1.079181246 0.461538462 0 0 13 1 0 12 3L:17551882-17551923 7 CycT FBtr0333125|FBtr0333124 17551002|17551002 17552803|17552803 TAGCTTT 7mer-m8 dme-miR-79-3p 3L - 17551882 17551933 3'utr CycT FlyBase G28426.1 TATGTTTCAAGATCGCCTGGAACGTTGACGTAGCTTTCATTTGTTTTAATTT 13 17551893 0.975113041 6 13 113 1 1.322219295 0.333333333 0.461538462 0.666666667 13 0 0 21 3L:17551882-17551933 7 11.5 1934 FBgn0025455 628.69 14.30666667 21.88666667 0.018292004 0.803821062 0.525434054 0 -10 -5 0.15 dme-miR-305-5p 6mer3-8 AGTACA 3L 17552323 17552328 - 3L_17552323_17552328_- 0.999985385 0.968365182 0.984175283 0.022358858 CycT FBtr0333125|FBtr0333124 17551002|17551002 17552803|17552803 3L - 17552301 17552343 3'utr CycT FlyBase G37633.1 AATCAAGAGATATATAGTACAGACTTCCGCTTAGCAAATATAC 21 17552329 0.810129816 5 18 121 0.8 0.823908741 0.12 0.19047619 0.32 21 3 2 20 3L:17552301-17552343 6 CycT FBtr0333125|FBtr0333124 17551002|17551002 17552803|17552803 AGTACA 6mer3-8 dme-miR-305-5p 3L - 17552311 17552343 3'utr CycT FlyBase G28430.1 AATCAAGAGATATATAGTACAGACTTCCGCTTA 8 17552329 0.785416965 3 7 41 0.909090909 1 0 0.25 0.454545455 8 1 0 10 3L:17552311-17552343 6 14 1935 FBgn0025455 628.69 14.30666667 21.88666667 0.022268527 0.978564772 0.639658849 1 1 1 0.15 dme-miR-92b-3p 7mer-m8 GTGCAAT 3L 17560428 17560434 - 3L_17560428_17560434_- 0.658997728 0.658999859 0.658998793 1.56E-06 Eip74EF FBtr0075203|FBtr0075204|FBtr0100411|FBtr0075202|FBtr0305796 17560156|17560156|17558670|17560156|17560156 17561769|17561769|17561769|17561769|17561769 3L - 17560408 17560458 3'utr Eip74EF FlyBase G37660.1 CAATTTCCAAACACTGCCCAAAACGTGCAATCTCTTGAAAGGATACCTTGA 11 17560433 0.887387584 5 10 53 0.916666667 1.041392685 0.083333333 0.090909091 0.166666667 11 1 0 11 3L:17560408-17560458 7 Eip74EF FBtr0075203|FBtr0305796|FBtr0075202|FBtr0100411|FBtr0075204 17560156|17560156|17560156|17558670|17560156 17561769|17561769|17561769|17561769|17561769 GTGCAAT 7mer-m8 dme-miR-92b-3p 3L - 17560401 17560444 3'utr Eip74EF FlyBase G28448.1 TGCCCAAAACGTGCAATCTCTTGAAAGGATACCTTGAATAGGAA 6 17560433 0.96192971 3 6 34 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 3L:17560401-17560444 7 7 1936 FBgn0000567 175.3133333 4.123333333 6.33 0.039928509 1.697655618 1.105845182 -1 -1 -1 0.15 dme-miR-33-5p 8mer-A1 CAATGCAA 3L 17560479 17560486 - 3L_17560479_17560486_- 0.458867723 0.373425231 0.416146477 0.060416971 Eip74EF FBtr0075203|FBtr0075204|FBtr0100411|FBtr0075202|FBtr0305796 17560156|17560156|17558670|17560156|17560156 17561769|17561769|17561769|17561769|17561769 3L - 17560467 17560498 3'utr Eip74EF FlyBase G37661.1 AACCGCAATCCTCAATGCAATATACCGACAAC 5 17560478 0.794724932 2 3 14 0.714285714 0.698970004 0 0.4 0.571428571 5 2 0 5 3L:17560467-17560498 8 Eip74EF FBtr0075203|FBtr0305796|FBtr0075202|FBtr0100411|FBtr0075204 17560156|17560156|17560156|17558670|17560156 17561769|17561769|17561769|17561769|17561769 CAATGCAA 8mer-A1 dme-miR-33-5p 3L - 17560465 17560502 3'utr Eip74EF FlyBase G28449.1 CTGCAACCGCAATCCTCAATGCAATATACCGACAACTT 7 17560484 0.968354673 3 4 27 0.8 0.602059991 0.1 0.285714286 0.5 7 1 1 8 3L:17560465-17560502 8 5.5 1937 FBgn0000567 175.3133333 4.123333333 6.33 0.0313724 1.333872272 0.868878357 -8 -2 -5 0.15 dme-bantam-3p 6mer3-8 TGATCT 3L 17561167 17561172 - 3L_17561167_17561172_- 0.998680368 0.998570822 0.998625595 7.75E-05 Eip74EF FBtr0075203|FBtr0075204|FBtr0100411|FBtr0075202|FBtr0305796 17560156|17560156|17558670|17560156|17560156 17561769|17561769|17561769|17561769|17561769 3L - 17561154 17561193 3'utr Eip74EF FlyBase G37664.1 CAAGAATTTCTCTATCTCTATTGATCTAATGCTAAATCTA 17 17561173 0.699280383 5 16 160 0.954545455 1.322219295 0.136363636 0.235294118 0.409090909 17 1 0 21 3L:17561154-17561193 6 Eip74EF FBtr0075203|FBtr0305796|FBtr0075202|FBtr0100411|FBtr0075204 17560156|17560156|17560156|17558670|17560156 17561769|17561769|17561769|17561769|17561769 TGATCT 6mer3-8 dme-bantam-3p 3L - 17561157 17561192 3'utr Eip74EF FlyBase G28451.1 AAGAATTTCTCTATCTCTATTGATCTAATGCTAAAT 7 17561173 0.721636197 4 7 74 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3L:17561157-17561192 6 12 1938 FBgn0000567 175.3133333 4.123333333 6.33 0.068448872 2.910266774 1.895734597 1 1 1 0.15 dme-miR-283-5p 7mer-m8 TGATATT 3L 17561240 17561246 - 3L_17561240_17561246_- 0.483773653 0.600397329 0.542085491 0.082465338 Eip74EF FBtr0075203|FBtr0075204|FBtr0100411|FBtr0075202|FBtr0305796 17560156|17560156|17558670|17560156|17560156 17561769|17561769|17561769|17561769|17561769 3L - 17561205 17561278 3'utr Eip74EF FlyBase G37665.1 AGAGGACGAAGGACGACCGAATTGATTCATATTGATATTCGATAGATGTGTGTAATATGTAAATGAGTACGAAC 12 17561257 0.983680556 5 9 68 0.714285714 1 0.285714286 0.083333333 0.214285714 12 4 0 10 3L:17561205-17561278 7 Eip74EF FBtr0075203|FBtr0305796|FBtr0075202|FBtr0100411|FBtr0075204 17560156|17560156|17560156|17558670|17560156 17561769|17561769|17561769|17561769|17561769 TGATATT 7mer-m8 dme-miR-283-5p 3L - 17561225 17561271 3'utr Eip74EF FlyBase G28452.1 GAAGGACGACCGAATTGATTCATATTGATATTCGATAGATGTGTGTA 7 17561247 0.985221532 4 7 58 1 1.041392685 0.363636364 0.428571429 0.636363636 7 0 0 11 3L:17561225-17561271 7 6.5 1939 FBgn0000567 175.3133333 4.123333333 6.33 0.037076473 1.576394503 1.02685624 11 1 6 0.15 dme-bantam-3p 6mer3-8 TGATCT 3L 17561432 17561437 - 3L_17561432_17561437_- 0.999648666 0.999589648 0.999619157 4.18E-05 Eip74EF FBtr0075203|FBtr0075204|FBtr0100411|FBtr0075202|FBtr0305796 17560156|17560156|17558670|17560156|17560156 17561769|17561769|17561769|17561769|17561769 3L - 17561347 17561491 3'utr Eip74EF FlyBase G37666.1 ACACCCTGTGTCCTGTACCCTATACATACACCCAGCTAAATCGACGGTAAATAATGATCTATTCATGGGCGTTAGTGTTGTACTTGTAACTGTAGATTTAACTGTAAACTGTAACTGTAATGAATATTGTTATTATTGGTTATTA 87 17561437 0.986486788 14 81 695 0.919191919 1.959041392 0.070707071 0.137931034 0.242424242 87 8 0 91 3L:17561347-17561491 6 Eip74EF FBtr0075203|FBtr0305796|FBtr0075202|FBtr0100411|FBtr0075204 17560156|17560156|17560156|17558670|17560156 17561769|17561769|17561769|17561769|17561769 TGATCT 6mer3-8 dme-bantam-3p 3L - 17561377 17561491 3'utr Eip74EF FlyBase G28453.1 ACACCCTGTGTCCTGTACCCTATACATACACCCAGCTAAATCGACGGTAAATAATGATCTATTCATGGGCGTTAGTGTTGTACTTGTAACTGTAGATTTAACTGTAAACTGTAAC 47 17561437 0.770845622 14 46 360 0.955882353 1.812913357 0.191176471 0.340425532 0.544117647 47 3 0 65 3L:17561377-17561491 6 45.5 1940 FBgn0000567 175.3133333 4.123333333 6.33 0.259535308 11.03476152 7.187993681 0 0 0 0.15 dme-miR-1008-3p 8mer-A1 AGCTGTGA 3L 1759130 1759137 + 3L_1759130_1759137_+ 0.628713444 0.632047051 0.630380248 0.002357282 CG8001 FBtr0334073|FBtr0300292|FBtr0334074|FBtr0072774 1759035|1759035|1759035|1759035 1759208|1759208|1759208|1759208 3L + 1759111 1759156 3'utr CG8001 FlyBase G27208.1 TGTTAGAAAGCGTTTCTGAAGCTGTGAATTTGTAACCGTAACACAT 72 1759126 0.678658016 8 68 594 0.952941176 1.607455023 0.235294118 0.138888889 0.270588235 72 3 1 81 3L:1759111-1759156 8 CG8001 FBtr0334074|FBtr0072774|FBtr0334073|FBtr0300292 1759035|1759035|1759035|1759035 1759208|1759208|1759208|1759208 AGCTGTGA 8mer-A1 dme-miR-1008-3p 3L + 1759106 1759156 3'utr CG8001 FlyBase G20596.1 AACTATGTTAGAAAGCGTTTCTGAAGCTGTGAATTTGTAACCGTAACACAT 55 1759127 0.71612987 8 52 453 0.941176471 1.425968732 0.458823529 0.454545455 0.647058824 55 3 2 80 3L:1759106-1759156 8 63 1941 FBgn0035268 473.3333333 22.80666667 34.95333333 0.133098592 2.76235019 1.802403204 4 3 3.5 0.15 dme-miR-308-3p 8mer-m1 CTGTGATT 3L 17630070 17630077 + 3L_17630070_17630077_+ 0.38262838 0.382223841 0.38242611 0.000286095 CG7510 FBtr0333121|FBtr0075182 17629985|17629985 17630971|17630480 3L + 17630028 17630124 3'utr CG7510 FlyBase G31157.1 CTTGATTTCCTGTTTAGTTTATTTTGAATGTAATTTTGACTGCTGTGATTGTACGCCAAACAAGAACGCACACACAATGCAGTCAGTTGTGTGTGGG 151 17630077 0.756423141 12 144 1193 0.954545455 2.225309282 0.068181818 0.125827815 0.25 151 8 0 168 3L:17630028-17630124 8 CG7510 FBtr0333121|FBtr0075182 17629985|17629985 17630971|17630480 CTGTGATT 8mer-m1 dme-miR-308-3p 3L + 17630046 17630124 3'utr CG7510 FlyBase G23571.1 TTATTTTGAATGTAATTTTGACTGCTGTGATTGTACGCCAAACAAGAACGCACACACAATGCAGTCAGTTGTGTGTGGG 111 17630077 0.79662595 11 104 864 0.977142857 2.23299611 0.165714286 0.405405405 0.622857143 111 4 0 171 3L:17630046-17630124 8 120 1942 FBgn0036741 369.9166667 11.27333333 17.24666667 0.324397387 10.644589 6.957866254 -7 -7 -7 0.15 dme-miR-92b-3p 8mer-A1 GTGCAATA 3L 17630264 17630271 + 3L_17630264_17630271_+ 0.443805665 0.594169351 0.518987508 0.106323192 CG7510 FBtr0333121|FBtr0075182 17629985|17629985 17630971|17630480 3L + 17630251 17630289 3'utr CG7510 FlyBase G31159.1 AGAGCTTTATGCAGTGCAATATAGAATACTGAATGTAAC 6 17630260 0.969192641 2 6 33 1 0.954242509 0.333333333 0.333333333 0.555555556 6 0 0 9 3L:17630251-17630289 8 CG7510 FBtr0333121|FBtr0075182 17629985|17629985 17630971|17630480 GTGCAATA 8mer-A1 dme-miR-92b-3p 3L + 17630246 17630290 3'utr CG7510 FlyBase G23573.1 CAGCTAGAGCTTTATGCAGTGCAATATAGAATACTGAATGTAACA 6 17630259 0.862561536 5 6 34 1 0.84509804 0.428571429 0.166666667 0.285714286 6 0 0 7 3L:17630246-17630290 8 5 1943 FBgn0036741 369.9166667 11.27333333 17.24666667 0.013516558 0.443524542 0.289911094 4 5 4.5 0.15 dme-miR-7-5p 6mer2-7 TCTTCC 3L 17638389 17638394 - 3L_17638389_17638394_- 0.673936652 0.652795128 0.66336589 0.014949369 Pep FBtr0075200|FBtr0304977|FBtr0075198|FBtr0075199 17638101|17638101|17638116|17638101 17638504|17638504|17640026|17638504 3L - 17638306 17638516 stop_codon Pep FlyBase G37675.1 AATCGCTACTAAGTAGACGTCGAAGGAATTCGTAATTTAACATAACATAAACCTTAATATACAAGAAAAAATTTACATTCACGCCCAGGAGGAGGATGAAGAAAGAACAGATCAAATCGATCTCTTCCCGCAATTTGACATTTGCATCCCAATTTGCATATACACTGAATGAATGGAAACTGAGAAGAAGACGGTCAACTTTTAGTTGAAA 350 17638392 0.799441887 34 344 1763 0.98630137 2.635483747 0.205479452 0.202857143 0.363013699 350 6 0 432 3L:17638306-17638516 6 Pep FBtr0075198 17638116 17640026 TCTTCC 6mer2-7 dme-miR-7-5p 3L - 17638262 17638450 3'utr Pep FlyBase G28460.1 AAAAATTTACATTCACGCCCAGGAGGAGGATGAAGAAAGAACAGATCAAATCGATCTCTTCCCGCAATTTGACATTTGCATCCCAATTTGCATATACACTGAATGAATGGAAACTGAGAAGAAGACGGTCAACTTTTAGTTGAAACAGTTGAATATATTGTACGACGAAGCTTCTTGAAACTGACGAGG 238 17638392 0.999991375 18 234 1184 0.980337079 2.542825427 0.18258427 0.340336134 0.558988764 238 7 0 349 3L:17638262-17638450 6 237 1944 FBgn0004401 3496.79 156.06 239.5966667 0.067776446 1.518646674 0.989162342 -2 -2 -2 0.15 dme-miR-184-5p 6mer3-8 TGATAA 3L 17638884 17638889 - 3L_17638884_17638889_- 0.974121928 1 0.987060964 0.01829858 Pep FBtr0075198 17638116 17640026 3L - 17638861 17638958 3'utr Pep FlyBase G37679.1 AGGCGCTGAGGGTGAGCTGTACGATCCATCGGAAGCCACTGGCGATGACGAGGACGTGGAGATGGTGGATGATAATGCTGAGGGCGAGGGCGAAGGCG 19 17638884 0.930344867 6 18 68 0.954545455 1.322219295 0.409090909 0.157894737 0.272727273 19 1 0 21 3L:17638861-17638958 6 Pep FBtr0075198 17638116 17640026 TGATAA 6mer3-8 dme-miR-184-5p 3L - 17638865 17638925 3'utr Pep FlyBase G28463.1 AGCCACTGGCGATGACGAGGACGTGGAGATGGTGGATGATAATGCTGAGGGCGAGGGCGAA 8 17638883 0.881912087 6 8 22 1 1 0.1 0.25 0.4 8 0 0 10 3L:17638865-17638925 6 8 1945 FBgn0004401 3496.79 156.06 239.5966667 0.002287813 0.051262335 0.033389446 -5 -6 -5.5 0.15 dme-bantam-3p 7mer-m8 TGATCTC 3L 17639205 17639211 - 3L_17639205_17639211_- 0.661465358 0.658809425 0.660137391 0.001878076 Pep FBtr0075198 17638116 17640026 3L - 17639025 17639256 3'utr Pep FlyBase G37680.1 CCCGCCTACCTAAGTACAACTGGCAGCGTGCTGTCGGTCCCGGTCTGATCTCCAAGCTGGAGTGCTATGAGTGCTCGGTGTGCAGCAAGTTCTTCGACACCGAGGTGACCGCCGAGATTCACTCCCGTACGGCGACTCATCACCGCAACTTCTTGAAGTTTATCAACGAGAAATCAAGCGATACCAAGATCGCACAGAAGCGCGCAGCTGCCGCCCTGGAGGAGAATGAGCG 89 17639211 0.973825908 22 76 470 0.884615385 1.264817823 0.201923077 0.146067416 0.269230769 89 8 4 92 3L:17639025-17639256 7 Pep FBtr0075198 17638116 17640026 TGATCTC 7mer-m8 dme-bantam-3p 3L - 17639168 17639258 3'utr Pep FlyBase G28467.1 TACCCGCCTACCTAAGTACAACTGGCAGCGTGCTGTCGGTCCCGGTCTGATCTCCAAGCTGGAGTGCTATGAGTGCTCGGTGTGCAGCAAG 19 17639212 0.889050501 8 17 109 0.935483871 1.462397998 0.225806452 0.421052632 0.64516129 19 2 0 29 3L:17639168-17639258 7 20 1946 FBgn0004401 3496.79 156.06 239.5966667 0.005719531 0.128155837 0.083473615 0 1 0.5 0.15 dme-miR-34-5p 7mer-m8 CACTGCC 3L 17639322 17639328 - 3L_17639322_17639328_- 0.701703166 0.554977523 0.628340344 0.103750737 Pep FBtr0075198 17638116 17640026 3L - 17639268 17639399 3'utr Pep FlyBase G37681.1 GGGTGAGGAAGCTGCTGACGAGACAAAGGAGGGCGATGAGCTAAACGAGAGCCAAGAGGAAGAGGAAGTGGCACTGCCCGTGGACCCCGAGGACTGCATCCTTGACTTCAACGACGGCGATGAGATCCCCAG 32 17639331 0.895687552 10 32 71 1 1.612783857 0.43902439 0.28125 0.43902439 32 0 0 41 3L:17639268-17639399 7 Pep FBtr0075198 17638116 17640026 CACTGCC 7mer-m8 dme-miR-34-5p 3L - 17639260 17639334 3'utr Pep FlyBase G28468.1 AAGTGGCACTGCCCGTGGACCCCGAGGACTGCATCCTTGACTTCAACGACGGCGATGAGATCCCCAGCGAGGTGG 12 17639319 0.923067419 6 12 40 1 1.278753601 0.052631579 0.416666667 0.631578947 12 0 0 19 3L:17639260-17639334 7 9 1947 FBgn0004401 3496.79 156.06 239.5966667 0.002573789 0.057670127 0.037563127 3 -9 -3 0.15 dme-miR-282-5p 7mer-A1 GAGGCTA 3L 17639467 17639473 - 3L_17639467_17639473_- 0.611587684 0.614350628 0.612969156 0.001953665 Pep FBtr0075198 17638116 17640026 3L - 17639449 17639500 3'utr Pep FlyBase G37682.2 AAGAAGGAGGGCGAAGCAGCCGATGGCGAGGCTAAGAAGGAGGGTGCCGGCG 41 17639477 0.977169677 2 33 41 0.909090909 1.602059991 0.568181818 0.073170732 0.136363636 41 4 0 40 3L:17639449-17639500 7 Pep FBtr0075198 17638116 17640026 GAGGCTA 7mer-A1 dme-miR-282-5p 3L - 17639419 17639499 3'utr Pep FlyBase G28469.1 AGAAGGAGGGCGAAGCAGCCGATGGCGAGGCTAAGAAGGAGGGTGCCGGCGATGGCGAGGGTGCCGAAGGTGATGAAGCCG 21 17639477 0.952206554 6 19 32 0.947368421 1.255272505 0.526315789 0.619047619 0.789473684 21 1 1 36 3L:17639419-17639499 7 23 1948 FBgn0004401 3496.79 156.06 239.5966667 0.006577461 0.147379213 0.095994658 4 4 4 0.15 dme-miR-12-5p 7mer-A1 ATACTCA 3L 17639646 17639652 - 3L_17639646_17639652_- 0.778435143 0.764609318 0.77152223 0.009776317 Pep FBtr0075198 17638116 17640026 3L - 17639585 17639902 3'utr Pep FlyBase G37683.1 CGCCTCAAGGCCAACATGATCCGTCAGGAGGCTAAGATCGCAGAGCAGCTCAAGTCGATCGAGTTTGACCGCTTGAAGCGCATGGGCAAAAGCAAGCAGCGTCAGCTGGACTACTGCACCATGTGCGACCTGAACTTCCATGGTCACATCTCGACCCATCGCAAGTCGGAGGGACATTTGCAGCTGAAGAAGTTCTTGCACCCCAAGTGCATTGAGTGCAACAAGGAGTTCGCCACTCGCATTGACTACGATACTCATCTGCTGTCCGCCGAGCATCTGAAGAAGGCTGCCGAGAACAACACCAAGGTGGGTGAGCGC 144 17639645 0.970719689 35 132 758 0.915151515 1.480006943 0.151515152 0.125 0.236363636 144 10 4 151 3L:17639585-17639902 7 Pep FBtr0075198 17638116 17640026 ATACTCA 7mer-A1 dme-miR-12-5p 3L - 17639585 17639675 3'utr Pep FlyBase G28470.1 GTTCGCCACTCGCATTGACTACGATACTCATCTGCTGTCCGCCGAGCATCTGAAGAAGGCTGCCGAGAACAACACCAAGGTGGGTGAGCGC 29 17639645 0.978988996 7 27 177 0.857142857 0.77815125 0.333333333 0.310344828 0.523809524 29 1 5 36 3L:17639585-17639675 7 39.5 1949 FBgn0004401 3496.79 156.06 239.5966667 0.011296074 0.253107779 0.16486039 -7 -7 -7 0.15 dme-miR-980-3p 6mer2-7 GCAGCT 3L 17639718 17639723 - 3L_17639718_17639723_- 0.99953497 0.999756072 0.999645521 0.000156341 Pep FBtr0075198 17638116 17640026 3L - 17639585 17639902 3'utr Pep FlyBase G37683.1 CGCCTCAAGGCCAACATGATCCGTCAGGAGGCTAAGATCGCAGAGCAGCTCAAGTCGATCGAGTTTGACCGCTTGAAGCGCATGGGCAAAAGCAAGCAGCGTCAGCTGGACTACTGCACCATGTGCGACCTGAACTTCCATGGTCACATCTCGACCCATCGCAAGTCGGAGGGACATTTGCAGCTGAAGAAGTTCTTGCACCCCAAGTGCATTGAGTGCAACAAGGAGTTCGCCACTCGCATTGACTACGATACTCATCTGCTGTCCGCCGAGCATCTGAAGAAGGCTGCCGAGAACAACACCAAGGTGGGTGAGCGC 144 17639725 0.970719689 35 132 758 0.915151515 1.480006943 0.151515152 0.125 0.236363636 144 10 4 151 3L:17639585-17639902 6 Pep FBtr0075198 17638116 17640026 GCAGCT 6mer2-7 dme-miR-980-3p 3L - 17639680 17639809 3'utr Pep FlyBase G28471.1 AAGCAGCGTCAGCTGGACTACTGCACCATGTGCGACCTGAACTTCCATGGTCACATCTCGACCCATCGCAAGTCGGAGGGACATTTGCAGCTGAAGAAGTTCTTGCACCCCAAGTGCATTGAGTGCAACA 27 17639725 0.9583296 12 26 125 0.976744186 1.62324929 0.069767442 0.407407407 0.627906977 27 1 0 42 3L:17639680-17639809 6 23 1950 FBgn0004401 3496.79 156.06 239.5966667 0.006577461 0.147379213 0.095994658 2 2 2 0.15 dme-miR-33-5p 7mer-A1 AATGCAA 3L 17645569 17645575 - 3L_17645569_17645575_- 0.597166923 0.663946458 0.630556691 0.047220308 CG43085 FBtr0333122|FBtr0304976 17645484|17645484 17645613|17645613 3L - 17645551 17645591 3'utr CG43085 FlyBase G37696.1 TCAAGGCTCAAATGGGAATGCAAGACACAGCGGACTAATTT 44 17645573 0.997209469 2 43 78 1 1.681241237 0.166666667 0.068181818 0.145833333 44 0 0 48 3L:17645551-17645591 7 CG43085 FBtr0304976|FBtr0333122 17645484|17645484 17645613|17645613 AATGCAA 7mer-A1 dme-miR-33-5p 3L - 17645544 17645596 3'utr CG43085 FlyBase G28483.1 AGGACTCAAGGCTCAAATGGGAATGCAAGACACAGCGGACTAATTTTATTCCA 33 17645573 0.98216591 3 33 74 1 1.755874856 0.087719298 0.454545455 0.684210526 33 0 0 57 3L:17645544-17645596 7 37.5 1951 FBgn0262531 5.666666667 0.7 1.11 6.617647059 53.57142857 33.78378378 -2 -2 -2 0.15 dme-miR-305-3p 8mer-m1 ATGTGCCG 3L 17661159 17661166 - 3L_17661159_17661166_- 0.628075158 0.627942945 0.628009051 9.36E-05 Crtc FBtr0345384|FBtr0330162 17659816|17659816 17662225|17661949 3L - 17661134 17661191 3'utr Crtc FlyBase G37712.1 ACACCCAACCCATATTATAATCCCAATGTGCCGTGGAAGCAATTACTAGAGTTTAAGA 29 17661163 0.940467417 5 29 122 1 1.51851394 0 0.137931034 0.242424242 29 0 0 33 3L:17661134-17661191 8 Crtc FBtr0345384|FBtr0330162 17659816|17659816 17662225|17661949 ATGTGCCG 8mer-m1 dme-miR-305-3p 3L - 17661132 17661178 3'utr Crtc FlyBase G28492.1 ATTATAATCCCAATGTGCCGTGGAAGCAATTACTAGAGTTTAAGATG 21 17661163 0.775153561 4 20 94 0.933333333 1.447158031 0.166666667 0.333333333 0.533333333 21 2 0 28 3L:17661132-17661178 8 24 1952 FBgn0036746 1464.6 32.19333333 49.71333333 0.016386727 0.745495962 0.482767869 -3 -3 -3 0.15 dme-miR-1008-3p 6mer3-8 AGCTGT 3L 1772287 1772292 - 3L_1772287_1772292_- 0.621196135 0.60457099 0.612883562 0.011755721 CG13933 FBtr0332881|FBtr0072792 1771807|1771807 1772601|1772601 3L - 1772278 1772343 3'utr CG13933 FlyBase G33477.1 AGATCGCTAAATTCTCTTAATTTAGGGCCAAAGGAGATACGCTTGATCTGAAGCTGTTGCGTATGA 51 1772286 0.795702591 9 48 323 0.919354839 1.153814864 0.483870968 0.117647059 0.274193548 51 2 3 57 3L:1772278-1772343 6 CG13933 FBtr0072792|FBtr0332881 1771807|1771807 1772601|1772601 AGCTGT 6mer3-8 dme-miR-1008-3p 3L - 1772272 1772344 3'utr CG13933 FlyBase G25324.1 TAGATCGCTAAATTCTCTTAATTTAGGGCCAAAGGAGATACGCTTGATCTGAAGCTGTTGCGTATGAGATATG 27 1772286 0.93916862 8 27 174 1 1.681241237 0.375 0.444444444 0.6875 27 0 0 48 3L:1772272-1772344 6 25.5 1953 FBgn0035270 373.6633333 14.21333333 21.71 0.068243249 1.794090056 1.174573929 -6 -6 -6 0.15 dme-miR-304-5p 7mer-m8 TGAGATT 3L 17752172 17752178 - 3L_17752172_17752178_- 0.549427971 0.562053113 0.555740542 0.008927294 Adgf-A FBtr0075191|FBtr0075190 17751729|17751729 17752452|17752452 3L - 17752143 17752238 3'utr Adgf-A FlyBase G37727.1 AGCTAATCGTTATGGACTAGTCCTTAGTTAGATCTAGGCTAATACCTCTCTGTAAACCCATGAGATTCTGTCCCACGCCCCTAAAACTGTTTCAAT 58 17752173 0.76055844 9 57 352 0.984375 1.799340549 0.09375 0.103448276 0.1875 58 1 0 63 3L:17752143-17752238 7 Adgf-A FBtr0075191|FBtr0075190 17751729|17751729 17752452|17752452 TGAGATT 7mer-m8 dme-miR-304-5p 3L - 17752148 17752239 3'utr Adgf-A FlyBase G28502.1 AAGCTAATCGTTATGGACTAGTCCTTAGTTAGATCTAGGCTAATACCTCTCTGTAAACCCATGAGATTCTGTCCCACGCCCCTAAAACTGTT 34 17752173 0.751486609 8 32 204 0.982142857 1.439332694 0.053571429 0.441176471 0.660714286 34 0 1 55 3L:17752148-17752239 7 33.5 1954 FBgn0036752 1210.026667 56.79666667 87.13666667 0.02768534 0.589823346 0.38445354 -5 -5 -5 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 3L 17797846 17797852 - 3L_17797846_17797852_- 0.615439264 0.617122568 0.616280916 0.001190273 NUCB1 FBtr0075171 17797736 17798085 3L - 17797762 17797871 3'utr NUCB1 FlyBase G37734.1 TTCGCTTTTCCAGTAGCTCTGCATTTGCGTGATGTATTTCTCTAACGAATTTTGTGTACATATGAGTTTATACCTGAACATCAAAAACAAAATAAATGAAATGAAACGAA 85 17797846 0.989664956 15 81 792 0.949494949 1.496006599 0.212121212 0.152941176 0.272727273 85 3 2 94 3L:17797762-17797871 7 NUCB1 FBtr0075171 17797736 17798085 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 17797825 17797869 3'utr NUCB1 FlyBase G28508.2 CGCTTTTCCAGTAGCTCTGCATTTGCGTGATGTATTTCTCTAACG 58 17797847 0.780720965 6 56 568 0.967391304 1.949390007 0.173913043 0.396551724 0.619565217 58 3 0 89 3L:17797825-17797869 7 58.5 1955 FBgn0052190 2200.613333 121.53 186.3466667 0.026583498 0.481362627 0.313931025 -6 -5 -5.5 0.15 dme-miR-7-5p 6mer2-7 TCTTCC 3L 17843964 17843969 - 3L_17843964_17843969_- 0.847007343 0.805158361 0.826082852 0.029591641 MED19 FBtr0075160|FBtr0345815 17843813|17843723 17844253|17844253 3L - 17843909 17844063 3'utr MED19 FlyBase G37748.1 AATTTTTCGTTCGTTTTCGCGCTAGCTTAATGAGATTTATTTAAACGCAAGTTATGGTACAAAACGCAAGAACGTTTTCGCTCTCGATTCCAGCTCTTCCCTCCACACAAACACACCCCTCGCCACGCCGCCACAAAAACGCTGCTTTGCAACCT 101 17843967 0.967422233 9 97 531 0.949152542 2.049218023 0.245762712 0.128712871 0.254237288 101 6 0 112 3L:17843909-17844063 6 MED19 FBtr0345815|FBtr0075160 17843723|17843813 17844253|17844253 TCTTCC 6mer2-7 dme-miR-7-5p 3L - 17843936 17844045 3'utr MED19 FlyBase G28522.1 GCGCTAGCTTAATGAGATTTATTTAAACGCAAGTTATGGTACAAAACGCAAGAACGTTTTCGCTCTCGATTCCAGCTCTTCCCTCCACACAAACACACCCCTCGCCACGC 84 17843967 0.710408113 6 81 395 0.975806452 2.08278537 0.266129032 0.357142857 0.564516129 84 3 0 121 3L:17843936-17844045 6 57 1956 FBgn0036761 540.3333333 35.77333333 55.01 0.105490438 1.593365635 1.036175241 -2 -2 -2 0.15 dme-miR-980-5p 6mer3-8 GAAAAA 3L 17849217 17849222 + 3L_17849217_17849222_+ 0.985638233 0.982915972 0.984277102 0.001924886 CG7430 FBtr0331810|FBtr0075140 17849144|17849144 17849372|17849601 3L + 17849195 17849248 3'utr CG7430 FlyBase G31171.1 AATCTTTGAATAACCCCTATTCGAAAAATTATCCTGACGGCCGAAACGACAGTC 10 17849223 0.967646001 5 10 57 1 1.079181246 0.5 0.1 0.25 10 0 0 12 3L:17849195-17849248 6 CG7430 FBtr0331810|FBtr0075140 17849144|17849144 17849372|17849601 GAAAAA 6mer3-8 dme-miR-980-5p 3L + 17849178 17849236 3'utr CG7430 FlyBase G23583.1 TTTTGCACCGCGTTTGAAATCTTTGAATAACCCCTATTCGAAAAATTATCCTGACGGCC 6 17849223 0.969770925 5 6 39 1 1 0.2 0.5 0.7 6 0 0 10 3L:17849178-17849236 6 6.5 1957 FBgn0036762 1043.3 65.57333333 100.5333333 0.006230231 0.099125661 0.064655172 -6 -6 -6 0.15 dme-miR-92b-3p 6mer2-7 TGCAAT 3L 17849326 17849331 + 3L_17849326_17849331_+ 0.995009858 0.999999387 0.997504622 0.003528109 CG7430 FBtr0331810|FBtr0075140 17849144|17849144 17849372|17849601 3L + 17849309 17849360 3'utr CG7430 FlyBase G31172.1 TGGCGCCAGGCGTTAATTGCAATGTAATATGTGTATTAAGCTAGAATAAATA 6 17849325 0.97142634 4 6 39 1 1.041392685 0 0.5 0.727272727 6 0 0 11 3L:17849309-17849360 6 CG7430 FBtr0331810|FBtr0075140 17849144|17849144 17849372|17849601 TGCAAT 6mer2-7 dme-miR-92b-3p 3L + 17849301 17849360 3'utr CG7430 FlyBase G23584.1 AATGGTAATGGCGCCAGGCGTTAATTGCAATGTAATATGTGTATTAAGCTAGAATAAATA 6 17849309 0.979108581 5 6 39 1 1 0.1 0.333333333 0.6 6 0 0 10 3L:17849301-17849360 6 3.5 1958 FBgn0036762 1043.3 65.57333333 100.5333333 0.00335474 0.053375356 0.034814324 1 17 9 0.15 dme-miR-970-3p 7mer-m8 TCTTATG 3L 17882622 17882628 + 3L_17882622_17882628_+ 0.639174092 0.426910274 0.533042183 0.150093172 CG7408 FBtr0300281|FBtr0075142 17882612|17882612 17883653|17883653 3L + 17882607 17882654 stop_codon CG7408 FlyBase G31187.1 TAATTAAATGAAAATTCTTATGTAGGTTAAATATTTAATGATCTTGTT 17 17882621 0.849019879 2 17 176 1 1.278753601 0.052631579 0.117647059 0.210526316 17 0 0 19 3L:17882607-17882654 7 CG7408 FBtr0300281|FBtr0075142 17882612|17882612 17883653|17883653 TCTTATG 7mer-m8 dme-miR-970-3p 3L + 17882612 17882654 stop_codon CG7408 FlyBase G23597.1 AAATGAAAATTCTTATGTAGGTTAAATATTTAATGATCTTGTT 8 17882622 0.812022478 4 8 82 1 1 0 0.25 0.4 8 0 0 10 3L:17882612-17882654 7 11.5 1959 FBgn0036765 3.666666667 0.176666667 0.263333333 3.136363636 65.09433962 43.67088608 1 0 0.5 0.15 dme-miR-92b-3p 8mer-m1 GTGCAATT 3L 17898975 17898982 - 3L_17898975_17898982_- 0.596510429 0.356918231 0.47671433 0.169417269 Prestin FBtr0075153 17898887 17899268 3L - 17898954 17899001 3'utr Prestin FlyBase G37765.1 AATGAAGTGCATTGATTTAGTGCAATTTGTACCAAAATGAACAATTCA 10 17898973 0.759709753 4 9 57 1 1.041392685 0.272727273 0.1 0.181818182 10 0 0 11 3L:17898954-17899001 8 Prestin FBtr0075153 17898887 17899268 GTGCAATT 8mer-m1 dme-miR-92b-3p 3L - 17898948 17898983 3'utr Prestin FlyBase G28535.1 AGTGCAATTTGTACCAAAATGAACAATTCAAACACA 6 17898974 0.948992985 3 6 28 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 3L:17898948-17898983 8 7 1960 FBgn0036770 2001.45 68.62666667 105.7333333 0.003497464 0.102001166 0.066204288 -9 -8 -8.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 17899204 17899210 - 3L_17899204_17899210_- 0.777912135 0.738572726 0.75824243 0.027817157 Prestin FBtr0075153|FBtr0075153|FBtr0075153 17898887|17898887|17898887 17899268|17899268|17899268 3L - 17899086 17899341 stop_codon Prestin FlyBase G37766.1 CGAAGGACCTTTTGAGATCTTCCCCACCCTGCACGATTGTGTGGAATATGCCAATGCCTGTCGAACAGCGTGAGAGGGTGTTCCTGCTCCAGACACCCCAGTTAACTGGGGCAGAGAGCCAAACCACGTTTTGTGATATGTCCAAGTGATAGCTTGTGAATCGTAGCATCAAAACCCCTTCCTAGTTGCTAAAATCTATTTTAAACTGAATAGAAACAATGTCGCCGTCTACAATCAAGCAGAATAGGCTAAGTTT 99 17899212 0.982029089 25 88 655 0.905172414 1.419129308 0.129310345 0.131313131 0.25862069 99 8 3 105 3L:17899086-17899341 7 Prestin FBtr0075153|FBtr0075153|FBtr0075153 17898887|17898887|17898887 17899268|17899268|17899268 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 17899085 17899239 3'utr Prestin FlyBase G28536.1 TAACTGGGGCAGAGAGCCAAACCACGTTTTGTGATATGTCCAAGTGATAGCTTGTGAATCGTAGCATCAAAACCCCTTCCTAGTTGCTAAAATCTATTTTAAACTGAATAGAAACAATGTCGCCGTCTACAATCAAGCAGAATAGGCTAAGTTTG 79 17899211 0.983440977 12 71 556 0.92 1.458637849 0.288 0.430379747 0.64 79 7 3 115 3L:17899085-17899239 7 67.5 1961 FBgn0036770 2001.45 68.62666667 105.7333333 0.033725549 0.98358267 0.638398487 2 1 1.5 0.15 dme-miR-283-5p 7mer-m8 TGATATT 3L 17909484 17909490 + 3L_17909484_17909490_+ 0.36426772 0.562675214 0.463471467 0.140295289 CG14353 FBtr0075144 17909436 17909683 3L + 17909463 17909502 3'utr CG14353 FlyBase G31193.1 TAAAGAAATGCTTCATACTTGTGATATTGGATGATGGGTT 58 17909481 0.699701346 8 55 529 0.96 1.556302501 0.653333333 0.172413793 0.36 58 2 1 72 3L:17909463-17909502 7 CG14353 FBtr0075144 17909436 17909683 TGATATT 7mer-m8 dme-miR-283-5p 3L + 17909466 17909505 3'utr CG14353 FlyBase G23600.1 AGAAATGCTTCATACTTGTGATATTGGATGATGGGTTAAT 47 17909481 0.62775468 9 39 439 0.838235294 0.801632346 0.602941176 0.29787234 0.514705882 47 3 8 57 3L:17909466-17909505 7 52.5 1962 FBgn0036771 185.44 15.31 23.46333333 0.28311044 3.429131287 2.237533741 3 3 3 0.15 dme-bantam-3p 6mer2-7 GATCTC 3L 17952969 17952974 - 3L_17952969_17952974_- 0.942482107 0.999999105 0.971240606 0.040670661 Eip75B FBtr0306814|FBtr0075150|FBtr0075149 17950951|17952160|17952160 17953640|17953640|17953640 3L - 17952945 17953039 3'utr Eip75B FlyBase G37797.1 ATTATTATTATTAAATTTTTAAATACCTAAAAACAAAACAATGTGTGTGAAATTTTTTATTGTGCGATCTCCAAGCAGAATTGAAGTGCAGTTTG 128 17952997 0.983848228 16 117 912 0.923566879 1.684246748 0.025477707 0.203125 0.350318471 128 10 2 145 3L:17952945-17953039 6 Eip75B FBtr0075149|FBtr0075150|FBtr0306814 17952160|17952160|17950951 17953640|17953640|17953640 GATCTC 6mer2-7 dme-bantam-3p 3L - 17952935 17953017 3'utr Eip75B FlyBase G28557.1 ATACCTAAAAACAAAACAATGTGTGTGAAATTTTTTATTGTGCGATCTCCAAGCAGAATTGAAGTGCAGTTTGCAACAAATTT 92 17952998 0.980630713 15 86 611 0.957142857 2.127104798 0.035714286 0.369565217 0.585714286 92 6 0 134 3L:17952935-17953017 6 50.5 1963 FBgn0000568 1336.92 32.88666667 50.30333333 0.03777339 1.535576728 1.003909615 23 24 23.5 0.15 dme-miR-92b-3p 7mer-m1 TGCAATT 3L 17953464 17953470 - 3L_17953464_17953470_- 0.763396273 0.763473611 0.763434942 5.47E-05 Eip75B FBtr0306814|FBtr0306813|FBtr0075148|FBtr0075151|FBtr0075150|FBtr0347013|FBtr0075149 17950951|17953356|17953356|17953356|17952160|17953356|17952160 17953640|17953640|17953640|17953640|17953640|17953640|17953640 3L - 17953457 17953486 3'utr Eip75B FlyBase G37800.1 GCAAAACCAACATGCATGCAATTTAAAACT 10 17953473 0.894101181 2 8 33 0.833333333 1 0.166666667 0.2 0.333333333 10 2 0 10 3L:17953457-17953486 7 Eip75B FBtr0075149|FBtr0075150|FBtr0347013|FBtr0075148|FBtr0075151|FBtr0306814|FBtr0306813 17952160|17952160|17953356|17953356|17953356|17950951|17953356 17953640|17953640|17953640|17953640|17953640|17953640|17953640 TGCAATT 7mer-m1 dme-miR-92b-3p 3L - 17953446 17953510 3'utr Eip75B FlyBase G28560.1 TTGAGACGTGTACAAAGTTTGAAAGCAAAACCAACATGCATGCAATTTAAAACTAATATTTAAAG 10 17953474 0.928639991 5 9 55 0.916666667 1.041392685 0 0.2 0.333333333 10 1 0 11 3L:17953446-17953510 7 7 1964 FBgn0000568 1336.92 32.88666667 50.30333333 0.005235915 0.21285222 0.139155788 3 4 3.5 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 3L 1802052 1802057 + 3L_1802052_1802057_+ 0.911875561 0.912442416 0.912158988 0.000400788 Patj FBtr0301625|FBtr0072781|FBtr0072779 1801823|1801823|1801823 1802184|1802184|1802184 3L + 1802036 1802071 3'utr Patj FlyBase G27229.1 ATTATTAACGCCGAATTGTGTTTGTCCCCTGAAAAC 16 1802051 0.825775458 3 16 118 1 1.301029996 0.45 0.1875 0.35 16 0 0 20 3L:1802036-1802071 6 Patj FBtr0301625|FBtr0072781|FBtr0072779 1801823|1801823|1801823 1802184|1802184|1802184 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 1802030 1802069 3'utr Patj FlyBase G20610.1 ATGCATATTATTAACGCCGAATTGTGTTTGTCCCCTGAAA 8 1802051 0.83287874 4 8 65 1 1 0.7 0.25 0.4 8 0 0 10 3L:1802030-1802069 6 11.5 1965 FBgn0067864 663.1966667 24.43 37.27666667 0.017340256 0.470732706 0.308503979 1 1 1 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 1802151 1802158 + 3L_1802151_1802158_+ 0.496510902 0.496759775 0.496635339 0.000175999 Patj FBtr0301625|FBtr0072781|FBtr0072779 1801823|1801823|1801823 1802184|1802184|1802184 3L + 1802126 1802175 3'utr Patj FlyBase G27230.1 TTAACATGGTATTTCCAGAGTGTATGTACTTAAACTAAATTAAATAATGT 111 1802150 0.7685985 3 110 878 1 2.103803721 0.023622047 0.117117117 0.228346457 111 0 0 127 3L:1802126-1802175 8 Patj FBtr0301625|FBtr0072781|FBtr0072779 1801823|1801823|1801823 1802184|1802184|1802184 GTACTTAA 8mer-A1 dme-miR-252-5p 3L + 1802125 1802185 3'utr Patj FlyBase G20611.1 TTTAACATGGTATTTCCAGAGTGTATGTACTTAAACTAAATTAAATAATGTACCTTCCGTA 82 1802150 0.752059427 5 79 628 0.967741935 2.079181246 0.008064516 0.365853659 0.580645161 82 4 0 120 3L:1802125-1802185 8 92.5 1966 FBgn0067864 663.1966667 24.43 37.27666667 0.139475972 3.786328285 2.481445051 1 1 1 0.15 dme-bantam-3p 8mer-A1 TGATCTCA 3L 18168772 18168779 - 3L_18168772_18168779_- 0.631056322 0.630633703 0.630845012 0.000298823 hid FBtr0075133 18167743 18170010 3L - 18168761 18168804 3'utr hid FlyBase G37832.1 AAAAACCAATTCCCAAAAATCGCATTGATCTCATGGATTTATAC 30 18168780 0.742862364 5 30 214 1 1.579783597 0.026315789 0.233333333 0.394736842 30 0 0 38 3L:18168761-18168804 8 hid FBtr0075133 18167743 18170010 TGATCTCA 8mer-A1 dme-bantam-3p 3L - 18168761 18168796 3'utr hid FlyBase G28591.1 ATTCCCAAAAATCGCATTGATCTCATGGATTTATAC 20 18168780 0.776140948 2 20 136 1 1.51851394 0 0.3 0.575757576 20 0 0 33 3L:18168761-18168796 8 25 1967 FBgn0003997 37.33333333 1.456666667 2.223333333 0.669642857 17.1624714 11.24437781 1 1 1 0.15 dme-miR-2a-2-5p 6mer2-7 GATGAG 3L 18397603 18397608 - 3L_18397603_18397608_- 0.860908703 0.756596421 0.808752562 0.073759935 rpr FBtr0075120 18397533 18398037 3L - 18397576 18397621 3'utr rpr FlyBase G37837.1 AGAAAAAAACGAAGATGAGTCGAAGTTGGCTAAAAATTGCATCAAT 16 18397606 0.960397547 3 16 81 1 1.230448921 0.117647059 0.0625 0.117647059 16 0 0 17 3L:18397576-18397621 6 rpr FBtr0075120 18397533 18398037 GATGAG 6mer2-7 dme-miR-2a-2-5p 3L - 18397562 18397627 3'utr rpr FlyBase G28594.1 AACCCCAGAAAAAAACGAAGATGAGTCGAAGTTGGCTAAAAATTGCATCAATTTTTTGTCAAACAA 8 18397606 0.992888931 3 7 35 1 1.113943352 0.076923077 0.5 0.692307692 8 0 0 13 3L:18397562-18397627 6 10.5 1968 FBgn0011706 109.3166667 15.44666667 23.89666667 0.096051227 0.679758308 0.439391826 -2 -2 -2 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 18397836 18397842 - 3L_18397836_18397842_- 0.629821532 0.592421114 0.611121323 0.026446076 rpr FBtr0075120|FBtr0075120|FBtr0075120 18397533|18397533|18397533 18398037|18398037|18398037 3L - 18397793 18397941 3'utr rpr FlyBase G37840.1 ACAGTCACCACTCATCAGCCGACGGCACTCGATTTCTACTGCAGTCAAGGACACAGAGCCACAACACCCACCCAATTTTAGTTTACTCATCAAAGCGATTGTGATAATGGTTTTGTTTCTACAAAAAAGCGGAGGAAAAATTTGAAAAA 3183 18397843 0.973742105 27 3002 26899 0.9450883 1.742268886 0.061810155 0.121269243 0.228200883 3183 138 61 3425 3L:18397793-18397941 7 rpr FBtr0075120|FBtr0075120|FBtr0075120 18397533|18397533|18397533 18398037|18398037|18398037 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 18397795 18397940 3'utr rpr FlyBase G28597.1 CAGTCACCACTCATCAGCCGACGGCACTCGATTTCTACTGCAGTCAAGGACACAGAGCCACAACACCCACCCAATTTTAGTTTACTCATCAAAGCGATTGTGATAATGGTTTTGTTTCTACAAAAAAGCGGAGGAAAAATTTGAAA 2243 18397843 0.98718596 30 2117 18575 0.944877345 1.891829385 0.062626263 0.380294249 0.598845599 2243 150 41 3274 3L:18397795-18397940 7 2669.5 1969 FBgn0011706 109.3166667 15.44666667 23.89666667 24.41988108 172.8204575 111.7101409 1 1 1 0.15 dme-miR-252-5p 7mer-m8 GTACTTA 3L 1851142 1851148 - 3L_1851142_1851148_- 0.588298693 0.588299917 0.588299305 8.49E-07 CNMa FBtr0332672|FBtr0303155 1850913|1850913 1851347|1851347 3L - 1851041 1851159 3'utr CNMa FlyBase G33542.1 ACGATTACATTGTACTTATACATAATGTCTCGACTTACACACACTGACACACATCTGATACCCGCTCTCTGCACACCGACATTCACACACACGCACACACCGAAGTATTTCCATATTAG 28 1851149 0.872215485 9 26 176 0.939393939 1.491361694 0.333333333 0.178571429 0.303030303 28 2 0 31 3L:1851041-1851159 7 CNMa FBtr0332672|FBtr0303155 1850913|1850913 1851347|1851347 GTACTTA 7mer-m8 dme-miR-252-5p 3L - 1851082 1851157 3'utr CNMa FlyBase G25365.1 GATTACATTGTACTTATACATAATGTCTCGACTTACACACACTGACACACATCTGATACCCGCTCTCTGCACACCG 15 1851149 0.777190814 7 14 84 0.958333333 1.361727836 0.333333333 0.4 0.625 15 1 0 23 3L:1851082-1851157 7 7 1970 FBgn0035282 2.666666667 0.21 0.333333333 2.625 33.33333333 21 1 1 1 0.15 dme-miR-317-5p 7mer-A1 TATCCCA 3L 1858304 1858310 + 3L_1858304_1858310_+ 0.823326568 0.823349379 0.823337973 1.61E-05 CG12024 FBtr0072833|FBtr0303152|FBtr0072832 1858183|1858183|1858183 1859047|1859047|1859047 3L + 1858187 1858359 3'utr CG12024 FlyBase G27237.1 CGGATCGTTTTGTTATCTAATCTCAACGGCCATAACGTGACGATCACGTGCGCTAGTAATCTCCCCAGTTCCCCAGTCCAAAGTAATCTCCGGGCAAGAACGAAATCTGAAATCTCCTATCCCAATCTCGACACAAAGATGCGATGGTATTACCCTAGTTTTAACCTTAAGTG 74 1858293 0.840945916 19 68 381 0.925925926 1.875061263 0.135802469 0.094594595 0.172839506 74 6 0 75 3L:1858187-1858359 7 CG12024 FBtr0072832|FBtr0303152|FBtr0072833 1858183|1858183|1858183 1859047|1859047|1859047 TATCCCA 7mer-A1 dme-miR-317-5p 3L + 1858246 1858353 3'utr CG12024 FlyBase G20616.1 TCTCCCCAGTTCCCCAGTCCAAAGTAATCTCCGGGCAAGAACGAAATCTGAAATCTCCTATCCCAATCTCGACACAAAGATGCGATGGTATTACCCTAGTTTTAACCT 37 1858294 0.970700306 8 30 178 0.849056604 1.176091259 0.20754717 0.351351351 0.547169811 37 6 2 45 3L:1858246-1858353 7 23 1971 FBgn0035283 210.8633333 14.46 22.18 0.109075388 1.590594744 1.036970243 11 10 10.5 0.15 dme-bantam-3p 8mer-A1 TGATCTCA 3L 1859248 1859255 - 3L_1859248_1859255_- 0.631132793 0.631135123 0.631133958 1.63E-06 R FBtr0332671|FBtr0303154|FBtr0072867 1859113|1859113|1859113 1860656|1860656|1860656 3L - 1859212 1859266 3'utr R FlyBase G33545.1 CACAGAGCCTCTGATCTCAGAATCCTGGCAGTCCCGAATTCGCGACGCAGTAGGT 76 1859256 0.708962651 6 70 276 0.867924528 1.361727836 0.08490566 0.263157895 0.471698113 76 11 3 92 3L:1859212-1859266 8 R FBtr0332671|FBtr0072867|FBtr0303154 1859113|1859113|1859113 1860656|1860656|1860656 TGATCTCA 8mer-A1 dme-bantam-3p 3L - 1859212 1859267 3'utr R FlyBase G25367.1 ACACAGAGCCTCTGATCTCAGAATCCTGGCAGTCCCGAATTCGCGACGCAGTAGGT 55 1859255 0.727588916 5 47 201 0.875 1.243038049 0.05 0.309090909 0.525 55 7 3 70 3L:1859212-1859267 8 47 1972 FBgn0004636 4610.196667 206.99 319.1866667 0.010194793 0.227064109 0.147249259 1 0 0.5 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 3L 1867575 1867580 + 3L_1867575_1867580_+ 0.999999998 0.999999999 0.999999999 0 CG12025 FBtr0345381|FBtr0072834|FBtr0332668 1867491|1867491|1867491 1869491|1867863|1868644 3L + 1867491 1867609 stop_codon CG12025 FlyBase G27247.1 AAGCGTAAGCGGACATCTGGACAGTCGAGCTGGTTGATCCATGGACGAAGAGAGTGGGAGAAGCCCCATCTATAAATATAAATCTGTGTTTGTTTATACCCGACCCGTATAAACAACTT 34 1867573 0.989900228 8 29 283 0.88372093 1.579783597 0.186046512 0.205882353 0.372093023 34 5 0 38 3L:1867491-1867609 6 CG12025 FBtr0332668|FBtr0072834|FBtr0345381 1867491|1867491|1867491 1868644|1867863|1869491 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 1867562 1867590 3'utr CG12025 FlyBase G20624.1 ATAAATATAAATCTGTGTTTGTTTATACC 11 1867574 0.746220819 3 6 102 0.611111111 0.740362689 0 0.545454545 0.722222222 11 6 1 11 3L:1867562-1867590 6 15.5 1973 FBgn0035285 812.7766667 48.59666667 74.35333333 0.019070429 0.318951917 0.20846409 2 1 1.5 0.15 dme-miR-33-5p 7mer-A1 AATGCAA 3L 18683015 18683021 - 3L_18683015_18683021_- 0.587454282 0.430122766 0.508788524 0.111250171 Chmp1 FBtr0345383 18682893 18683218 3L - 18683003 18683083 3'utr Chmp1 FlyBase G37880.1 CTTTAAGTGTAAGTGTGCTGTTTGTATAGGCTTCAAACGGATTATGATTTACATGCTTTTCTAATGCAATATACGATAATC 11 18683035 0.776829692 7 11 99 1 1.041392685 0.090909091 0 0 11 0 0 11 3L:18683003-18683083 7 Chmp1 FBtr0345383 18682893 18683218 AATGCAA 7mer-A1 dme-miR-33-5p 3L - 18683008 18683083 3'utr Chmp1 FlyBase G28623.1 CTTTAAGTGTAAGTGTGCTGTTTGTATAGGCTTCAAACGGATTATGATTTACATGCTTTTCTAATGCAATATACGA 8 18683037 0.986234576 6 7 66 0.933333333 1.146128036 0.066666667 0.625 0.8 8 1 0 14 3L:18683008-18683083 7 2 1974 FBgn0036805 502.6666667 72.55666667 110.72 0.00397878 0.027564662 0.018063584 14 16 15 0.15 dme-miR-307a-3p 6mer3-8 GGTTGT 3L 1868455 1868460 + 3L_1868455_1868460_+ 0.997278081 0.996521129 0.996899605 0.00053528 CG12025 FBtr0345381|FBtr0332668 1867491|1867491 1869491|1868644 3L + 1868421 1868471 3'utr CG12025 FlyBase G27251.1 GTATAATTTCATTTTAAGAATGAATGCTGAATATGGTTGTATTAAAACGAA 17 1868455 0.98784666 5 15 135 0.923076923 1.079181246 0.076923077 0.411764706 0.615384615 17 1 1 24 3L:1868421-1868471 6 CG12025 FBtr0332668|FBtr0345381 1867491|1867491 1868644|1869491 GGTTGT 6mer3-8 dme-miR-307a-3p 3L + 1868399 1868471 3'utr CG12025 FlyBase G20627.1 CAGCCGCTTAGTTGTTAATGTCGTATAATTTCATTTTAAGAATGAATGCTGAATATGGTTGTATTAAAACGAA 16 1868454 0.984657832 7 16 128 1 1.414973348 0.038461538 0.4375 0.653846154 16 0 0 26 3L:1868399-1868471 6 14 1975 FBgn0035285 812.7766667 48.59666667 74.35333333 0.017224904 0.288085603 0.188290146 0 1 0.5 0.15 dme-miR-317-3p 7mer-A1 GTGTTCA 3L 18752045 18752051 - 3L_18752045_18752051_- 0.823348312 0.823349535 0.823348923 8.49E-07 ftz-f1 FBtr0304627|FBtr0347045|FBtr0075086|FBtr0075087 18750605|18750605|18751747|18751747 18752745|18752745|18752745|18752745 3L - 18752021 18752092 3'utr ftz-f1 FlyBase G37897.2 GGAAAATCCATACAAAGAAAATGAAAACAAAGCAAATTTAGGTGTTCATGGTATGAATGTATGTGTATATTA 21 18752044 0.982275511 7 19 157 0.956521739 1.342422681 0.130434783 0.095238095 0.173913043 21 1 0 22 3L:18752021-18752092 7 ftz-f1 FBtr0075086|FBtr0075087|FBtr0304627|FBtr0347045 18751747|18751747|18750605|18750605 18752745|18752745|18752745|18752745 GTGTTCA 7mer-A1 dme-miR-317-3p 3L - 18752034 18752067 3'utr ftz-f1 FlyBase G28634.1 AACAAAGCAAATTTAGGTGTTCATGGTATGAATG 11 18752055 0.847236164 3 11 79 1 1.176091259 0 0.272727273 0.466666667 11 0 0 15 3L:18752034-18752067 7 14 1976 FBgn0001078 1154.326667 23.85 36.73 0.012128283 0.587002096 0.381159815 -7 4 -1.5 0.15 dme-miR-2b-2-5p 7mer-m8 TTGAAGA 3L 18752169 18752175 - 3L_18752169_18752175_- 0.631431099 0.631163402 0.63129725 0.000189292 ftz-f1 FBtr0304627|FBtr0347045|FBtr0075086|FBtr0075087 18750605|18750605|18751747|18751747 18752745|18752745|18752745|18752745 3L - 18752114 18752190 3'utr ftz-f1 FlyBase G37898.1 TAGTATCGTTCCCACTTGAAGATCGATTCTTGTATTTTTTTGCGCCAAGTGTCTTGCATAGTATTTGCGTCTAATCT 17 18752175 0.782322564 8 16 134 0.954545455 1.322219295 0.181818182 0.294117647 0.454545455 17 1 0 21 3L:18752114-18752190 7 ftz-f1 FBtr0075086|FBtr0075087|FBtr0304627|FBtr0347045 18751747|18751747|18750605|18750605 18752745|18752745|18752745|18752745 TTGAAGA 7mer-m8 dme-miR-2b-2-5p 3L - 18752155 18752189 3'utr ftz-f1 FlyBase G28635.1 AGTATCGTTCCCACTTGAAGATCGATTCTTGTATT 5 18752175 0.781863273 3 5 38 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3L:18752155-18752189 7 8.5 1977 FBgn0001078 1154.326667 23.85 36.73 0.0073636 0.35639413 0.231418459 0 0 0 0.15 dme-miR-33-5p 8mer-A1 CAATGCAA 3L 18802382 18802389 - 3L_18802382_18802389_- 0.626254079 0.340571031 0.483412555 0.202008457 CG14073 FBtr0075084|FBtr0332801 18802263|18802263 18802781|18802781 3L - 18802370 18802462 3'utr CG14073 FlyBase G37921.1 TAGAGCGAGAATATTGAGAAAATCTGGAATCTTTAGGGATTGGCTGCAATTATGCAATAAAAGTAGAAGAAAACAATGCAAGGCAGTTAGAAA 14 18802386 0.972726043 6 10 56 0.733333333 1.041392685 0.133333333 0.071428571 0.133333333 14 4 0 11 3L:18802370-18802462 8 CG14073 FBtr0332801|FBtr0075084 18802263|18802263 18802781|18802781 CAATGCAA 8mer-A1 dme-miR-33-5p 3L - 18802362 18802480 3'utr CG14073 FlyBase G28659.1 GGAAATGAATGGAAATTTTAGAGCGAGAATATTGAGAAAATCTGGAATCTTTAGGGATTGGCTGCAATTATGCAATAAAAGTAGAAGAAAACAATGCAAGGCAGTTAGAAACGAGGAAA 13 18802413 0.958140984 8 13 63 1 1.301029996 0.25 0.384615385 0.6 13 0 0 20 3L:18802362-18802480 8 5.5 1978 FBgn0036814 1280.663333 19.88666667 30.67333333 0.004294649 0.276567214 0.179308846 -3 24 10.5 0.15 "dme-miR-995-3p,dme-miR-998-3p" 7mer-A1 GGTGCTA 3L 18802504 18802510 - 3L_18802504_18802510_- 0.685001027 0.691673348 0.688337188 0.004718029 CG14073 FBtr0075084|FBtr0332801 18802263|18802263 18802781|18802781 3L - 18802486 18802522 3'utr CG14073 FlyBase G37922.1 AAGTGATACAAAGGTGCTATACACACTCAAAACGAAG 23 18802503 0.770038213 3 19 99 0.8 1 0.24 0.086956522 0.16 23 4 1 20 3L:18802486-18802522 7 CG14073 FBtr0332801|FBtr0075084 18802263|18802263 18802781|18802781 GGTGCTA 7mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 3L - 18802492 18802535 3'utr CG14073 FlyBase G28660.1 TAGAGCTAATGCAAAGTGATACAAAGGTGCTATACACACTCAAA 11 18802503 0.965074885 3 9 48 0.923076923 0.77815125 0.461538462 0.181818182 0.307692308 11 0 1 12 3L:18802492-18802535 7 16.5 1979 FBgn0036814 1280.663333 19.88666667 30.67333333 0.012883948 0.829701643 0.537926538 -7 -7 -7 0.15 dme-miR-184-5p 6mer3-8 TGATAA 3L 188028 188033 - 3L_188028_188033_- 0.999984917 0.999989545 0.999987231 3.25E-06 rno FBtr0305549|FBtr0305548|FBtr0072532 187205|187984|187205 188548|188548|188548 3L - 188016 188057 3'utr rno FlyBase G32807.1 CGCCTCCTACTCACTAAGCATGATTGATAAACCCCAGCATAT 11 188035 0.95299921 6 9 40 0.882352941 1.176091259 0.176470588 0.272727273 0.529411765 11 2 0 15 3L:188016-188057 6 rno FBtr0072532|FBtr0305549|FBtr0305548 187205|187205|187984 188548|188548|188548 TGATAA 6mer3-8 dme-miR-184-5p 3L - 188029 188118 3'utr rno FlyBase G24810.1 AAATCCAAAAATGCTCTCGGTTTAGGTTTATAAAGTTTCCATTCACCTAAAAATCCTTCCACGCCTCCTACTCACTAAGCATGATTGATA 11 188057 0.987698241 9 11 95 1 1.146128036 0.071428571 0.272727273 0.428571429 11 0 0 14 3L:188029-188118 4 5 1980 FBgn0035106 2909.993333 29.82333333 45.86333333 0.001718217 0.167653962 0.109019551 2 24 13 0.15 dme-miR-304-5p 6mer2-7 GAGATT 3L 18822126 18822131 + 3L_18822126_18822131_+ 0.998491843 0.999428946 0.998960394 0.00066263 HipHop FBtr0075056|FBtr0075057 18821971|18821971 18822353|18822353 3L + 18822069 18822134 3'utr HipHop FlyBase G31237.1 TAAAGAAAGACAGAGATGTTAGCTTGGCAGGAGCCACAGAAAGATAGCCGCCATTTGGAGATTTCC 7 18822124 0.958206453 4 7 35 1 0.954242509 0.222222222 0.142857143 0.333333333 7 0 0 9 3L:18822069-18822134 6 HipHop FBtr0075056|FBtr0075057 18821971|18821971 18822353|18822353 GAGATT 6mer2-7 dme-miR-304-5p 3L + 18822076 18822134 3'utr HipHop FlyBase G23632.1 AGACAGAGATGTTAGCTTGGCAGGAGCCACAGAAAGATAGCCGCCATTTGGAGATTTCC 8 18822123 0.821962176 6 8 35 1 1.176091259 0.266666667 0.625 0.8 8 0 0 15 3L:18822076-18822134 6 4 1981 FBgn0036815 593.3433333 65.71333333 100.9466667 0.006741459 0.060870447 0.039624884 2 3 2.5 0.15 dme-miR-14-3p 7mer-A1 AGACTGA 3L 18828832 18828838 - 3L_18828832_18828838_- 0.822856664 0.823328335 0.8230925 0.000333472 Indy FBtr0075083|FBtr0075082|FBtr0301857|FBtr0075081 18828630|18828630|18828630|18828630 18829222|18829222|18829222|18829222 3L - 18828819 18828936 3'utr Indy FlyBase G37950.1 ACTTAATTGTTGCATTTAGCATAAAAATGGAAAAGATTTGGAAAAGTTAGAACAGTTTGTTCAATGGCAGCCCTGGCCTGCTAATATTTTAAATAACTAGACTGAGAGAACTTACATA 32 18828839 0.9035187 12 32 185 1 1.591064607 0.051282051 0.1875 0.333333333 32 0 0 39 3L:18828819-18828936 7 Indy FBtr0075083|FBtr0075082|FBtr0301857|FBtr0075081 18828630|18828630|18828630|18828630 18829222|18829222|18829222|18829222 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 18828796 18828892 3'utr Indy FlyBase G28680.1 AGTTAGAACAGTTTGTTCAATGGCAGCCCTGGCCTGCTAATATTTTAAATAACTAGACTGAGAGAACTTACATATTCATACATGTTTTTCAACTTGT 22 18828840 0.972444983 8 19 127 0.891891892 1.217483944 0.108108108 0.409090909 0.648648649 22 3 1 33 3L:18828796-18828892 7 17.5 1982 FBgn0036816 1686.326667 80.33666667 123.0166667 0.010377586 0.217833285 0.142257147 1 2 1.5 0.15 dme-miR-932-5p 6mer2-7 GAATTG 3L 18877959 18877964 + 3L_18877959_18877964_+ 0.998293435 0.999794876 0.999044155 0.001061721 Ugt FBtr0075064 18877778 18878245 3L + 18877936 18877972 3'utr Ugt FlyBase G31284.1 AAGAAAACAGCTCACTAAAGTCTGAATTGTGTTTTGT 16 18877950 0.834634529 5 16 101 1 1.301029996 0.35 0.25 0.4 16 0 0 20 3L:18877936-18877972 6 Ugt FBtr0075064 18877778 18878245 GAATTG 6mer2-7 dme-miR-932-5p 3L + 18877933 18877965 3'utr Ugt FlyBase G23659.1 AAAAAGAAAACAGCTCACTAAAGTCTGAATTGT 7 18877951 0.965115805 4 7 35 1 1 0.4 0.285714286 0.5 7 0 0 10 3L:18877933-18877965 6 11.5 1983 FBgn0014075 2195.993333 49.69 76.23666667 0.00523681 0.231434896 0.15084605 9 8 8.5 0.15 dme-miR-980-3p 6mer3-8 GGCAGC 3L 18878829 18878834 - 3L_18878829_18878834_- 0.999820695 0.999798108 0.999809402 1.60E-05 CG3961 FBtr0333712|FBtr0302322|FBtr0075078|FBtr0075077 18878248|18878651|18878248|18878248 18879086|18879086|18879086|18879086 3L - 18878775 18879064 3'utr CG3961 FlyBase G37968.1 AGACATCAACAACGAATCGAACTCAAGAAACTGGGAAGCATTCATTCAAATATGCCTATACCATTTTAAACTGATGATAACAAAGACTACAGATACAGATACGAAAGCGAACTGTCTAATTTTGTAGTATCGTCAATTCTTAGCACGTAAGAGGAGCGCAAGATACACCAGATACAGATACAATACACATAAAATATACACAACTTCAAACTGACAAGGAGAATCCTTTTGGCAGCCGCATTTTTTTATATAATTTAACCGAGAAGCGAACCTTAATTAATATATTAACT 233 18878835 0.966440359 39 217 1163 0.931899642 1.373580663 0.193548387 0.175965665 0.311827957 233 9 10 260 3L:18878775-18879064 6 CG3961 FBtr0075078|FBtr0075077|FBtr0333712|FBtr0302322 18878248|18878248|18878248|18878651 18879086|18879086|18879086|18879086 GGCAGC 6mer3-8 dme-miR-980-3p 3L - 18878821 18878874 3'utr CG3961 FlyBase G28697.1 AAAATATACACAACTTCAAACTGACAAGGAGAATCCTTTTGGCAGCCGCATTTT 54 18878836 0.712718692 8 51 259 0.941176471 1.204119983 0.258823529 0.425925926 0.635294118 54 1 4 80 3L:18878821-18878874 6 58.5 1984 FBgn0036821 610.73 21.53333333 32.27333333 0.095787009 2.716718266 1.812642016 1 2 1.5 0.15 dme-miR-1008-3p 7mer-A1 GCTGTGA 3L 18900769 18900775 - 3L_18900769_18900775_- 0.803925504 0.798942683 0.801434093 0.003523372 arx FBtr0075075 18900593 18900900 3L - 18900766 18900789 3'utr arx FlyBase G37998.1 TAAAATTAACATGTGCTGTGAAAC 8 18900778 0.723892102 2 7 43 0.833333333 1 0 0.375 0.583333333 8 2 0 10 3L:18900766-18900789 7 arx FBtr0075075 18900593 18900900 GCTGTGA 7mer-A1 dme-miR-1008-3p 3L - 18900764 18900788 3'utr arx FlyBase G28727.1 AAAATTAACATGTGCTGTGAAACAA 7 18900779 0.703538993 3 7 35 1 1.079181246 0 0.571428571 0.75 7 0 0 12 3L:18900764-18900788 7 7.5 1985 FBgn0036826 465.3333333 66.11666667 101.5966667 0.016117479 0.113435846 0.07382132 3 4 3.5 0.15 dme-miR-34-5p 8mer-A1 CACTGCCA 3L 18900869 18900876 - 3L_18900869_18900876_- 0.575320968 0.627073832 0.6011974 0.036594756 arx FBtr0075075 18900593 18900900 3L - 18900848 18900890 3'utr arx FlyBase G37999.1 TCAAGAATTACTCCCACTGCCAAAGAACAAAAACCAAAACATT 68 18900873 0.934896065 4 62 176 0.91025641 1.550228353 0.051282051 0.132352941 0.243589744 68 6 1 71 3L:18900848-18900890 8 arx FBtr0075075 18900593 18900900 CACTGCCA 8mer-A1 dme-miR-34-5p 3L - 18900849 18900888 3'utr arx FlyBase G28728.1 AAGAATTACTCCCACTGCCAAAGAACAAAAACCAAAACAT 73 18900873 0.915534299 4 73 175 1 2.021189299 0.057142857 0.356164384 0.552380952 73 0 0 105 3L:18900849-18900888 8 70.5 1986 FBgn0036826 465.3333333 66.11666667 101.5966667 0.151504298 1.06629695 0.693920404 -3 -3 -3 0.15 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 19003843 19003850 - 3L_19003843_19003850_- 0.643449938 0.643545164 0.643497551 6.74E-05 nkd FBtr0075039|FBtr0332649|FBtr0332650 19003739|19003739|19003739 19004922|19005670|19004922 3L - 19003826 19003886 3'utr nkd FlyBase G38038.1 AAAAACAAAATGCATTTAACTCTTATTTACATAAAAAAGACTGATTTCCAATTAAACAATA 12 19003842 0.972362984 7 12 66 1 1.204119983 0 0.25 0.4375 12 0 0 16 3L:19003826-19003886 8 nkd FBtr0332649|FBtr0332650|FBtr0075039 19003739|19003739|19003739 19005670|19004922|19004922 AAGACTGA 8mer-A1 dme-miR-14-3p 3L - 19003827 19003869 3'utr nkd FlyBase G28758.1 AACTCTTATTTACATAAAAAAGACTGATTTCCAATTAAACAAT 11 19003842 0.583894125 4 9 64 0.904761905 1.278753601 0.047619048 0.545454545 0.761904762 11 2 0 19 3L:19003827-19003869 8 9.5 1987 FBgn0002945 3.333333333 0.083333333 0.136666667 2.85 114 69.51219512 -8 -8 -8 0.15 dme-miR-14-3p 6mer2-7 AGACTG 3L 19059629 19059634 - 3L_19059629_19059634_- 0.829705511 0.839555206 0.834630358 0.00696479 CG3797 FBtr0332648 19059398 19060274 3L - 19059590 19059669 3'utr CG3797 FlyBase G38041.1 TAAAAAGACAAAGCTTGATAGAAACACAAGCGCTTAGACTGCAATTGTTCAGCTCAAAAAAGCAACTGAGTATTGATAAA 100 19059636 0.960150433 6 99 488 1 2.08278537 0.05785124 0.17 0.314049587 100 0 0 121 3L:19059590-19059669 6 CG3797 FBtr0332648 19059398 19060274 AGACTG 6mer2-7 dme-miR-14-3p 3L - 19059610 19059651 3'utr CG3797 FlyBase G28760.1 TAGAAACACAAGCGCTTAGACTGCAATTGTTCAGCTCAAAAA 51 19059636 0.953204497 2 49 226 0.957446809 1.477121255 0.085106383 0.568627451 0.765957447 51 2 2 90 3L:19059610-19059651 6 73.5 1988 FBgn0036842 550.5966667 23.31333333 35.34666667 0.133491546 3.152702316 2.079403998 2 2 2 0.15 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 19059690 19059697 - 3L_19059690_19059697_- 0.643225341 0.643484056 0.643354699 0.000182999 CG3797 FBtr0332648 19059398 19060274 3L - 19059676 19059733 3'utr CG3797 FlyBase G38042.1 TTTACAGCTATTTCATTCAATTAATATTTCAATTCAAAGACTGACAACACCTTTCGTA 19 19059701 0.694787016 7 14 130 0.739130435 0.62838893 0 0.210526316 0.347826087 19 3 3 17 3L:19059676-19059733 8 CG3797 FBtr0332648 19059398 19060274 AAGACTGA 8mer-A1 dme-miR-14-3p 3L - 19059671 19059711 3'utr CG3797 FlyBase G28761.1 AATATTTCAATTCAAAGACTGACAACACCTTTCGTATGTTT 23 19059702 0.690026992 5 17 126 0.771428571 0.954242509 0 0.260869565 0.514285714 23 6 2 27 3L:19059671-19059711 8 19.5 1989 FBgn0036842 550.5966667 23.31333333 35.34666667 0.035416124 0.836431227 0.551678612 4 5 4.5 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3L 19059924 19059930 - 3L_19059924_19059930_- 0.520016715 0.51023933 0.515128022 0.006913666 CG3797 FBtr0332648|FBtr0075037 19059398|19059770 19060274|19060274 3L - 19059887 19060009 3'utr CG3797 FlyBase G38044.1 CGCATCTATAATCCGTGTCACAAAATCGATCCACCATGCCTATATAAACCTATACATAAAAATATCGTCTAGTGTTAAGTGTGATTTTTTGTTAATACATGTGGTTTTATATTTCGATAAGTT 37 19059924 0.990410344 14 36 366 0.962264151 1.230448921 0.075471698 0.27027027 0.490566038 37 0 2 51 3L:19059887-19060009 7 CG3797 FBtr0332648|FBtr0075037 19059398|19059770 19060274|19060274 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 19059841 19059968 3'utr CG3797 FlyBase G28763.1 ATATAAACCTATACATAAAAATATCGTCTAGTGTTAAGTGTGATTTTTTGTTAATACATGTGGTTTTATATTTCGATAAGTTTTAAAATTTATAAATTGTATATATCTTGAATATTTGTATTGTGTGT 24 19059924 0.990618135 13 24 247 1 1.591064607 0.179487179 0.5 0.692307692 24 0 0 39 3L:19059841-19059968 7 18.5 1990 FBgn0036842 550.5966667 23.31333333 35.34666667 0.033599913 0.793537318 0.523387401 -6 -6 -6 0.15 dme-bantam-3p 6mer2-7 GATCTC 3L 19060076 19060081 - 3L_19060076_19060081_- 0.845891651 0.99796206 0.921926856 0.107530011 CG3797 FBtr0332648|FBtr0075037 19059398|19059770 19060274|19060274 3L - 19060066 19060091 3'utr CG3797 FlyBase G38046.1 GTTTCAACTAGATCTCTTAAAGATCC 8 19060075 0.754275183 3 8 57 1 1.079181246 0.583333333 0.375 0.583333333 8 0 0 12 3L:19060066-19060091 6 CG3797 FBtr0332648|FBtr0075037 19059398|19059770 19060274|19060274 GATCTC 6mer2-7 dme-bantam-3p 3L - 19060055 19060090 3'utr CG3797 FlyBase G28764.1 TTTCAACTAGATCTCTTAAAGATCCATTAAAGTTGC 6 19060075 0.980594347 4 6 50 1 0.77815125 0 0 0 6 0 0 6 3L:19060055-19060090 6 7 1991 FBgn0036842 550.5966667 23.31333333 35.34666667 0.012713481 0.300257363 0.198038476 -6 -6 -6 0.15 dme-miR-190-5p 6mer3-8 ACATAT 3L 19068591 19068596 - 3L_19068591_19068596_- 0.999079118 0.812928839 0.906003978 0.131628139 Mkp3 FBtr0075036|FBtr0333220|FBtr0075035|FBtr0330089 19067730|19066153|19068366|19067730 19068911|19068911|19068911|19068653 3L - 19068561 19068607 3'utr Mkp3 FlyBase G38058.1 AAACCACACATACATATGAGCCGCTTGTTAAATAGGGGTACGAATTC 21 19068591 0.759164796 6 20 119 1 1.380211242 0.125 0.095238095 0.208333333 21 0 0 24 3L:19068561-19068607 6 Mkp3 FBtr0075036|FBtr0333220|FBtr0075035|FBtr0330089 19067730|19066153|19068366|19067730 19068911|19068911|19068911|19068653 ACATAT 6mer3-8 dme-miR-190-5p 3L - 19068548 19068605 3'utr Mkp3 FlyBase G28771.1 ACCACACATACATATGAGCCGCTTGTTAAATAGGGGTACGAATTCAAACTTTAATAAA 18 19068591 0.973106554 4 18 110 1 1.491361694 0.032258065 0.5 0.709677419 18 0 0 31 3L:19068548-19068605 6 17.5 1992 FBgn0036844 2217.94 92.15 143.0633333 0.007890204 0.189907759 0.122323446 -5 -5 -5 0.15 dme-miR-1006-3p 6mer3-8 CGAATT 3L 19094676 19094681 + 3L_19094676_19094681_+ 0.993900607 0.996608697 0.995254652 0.001914916 MESR6 FBtr0075026|FBtr0330090 19094563|19094563 19094760|19094760 3L + 19094620 19094701 3'utr MESR6 FlyBase G31317.1 TACAAAACTCGTTTGGGCGGGAAAACTCCACGACTAAAAGATACCCGTAGTGATTTCGAATTAGAACCTAATGATGGAAAAT 57 19094674 0.77105135 7 55 303 0.955882353 1.335792102 0.294117647 0.157894737 0.294117647 57 1 2 65 3L:19094620-19094701 6 MESR6 FBtr0330090|FBtr0075026 19094563|19094563 19094760|19094760 CGAATT 6mer3-8 dme-miR-1006-3p 3L + 19094594 19094703 3'utr MESR6 FlyBase G23682.1 CGCCACTGCGAATTAGATTCTGAATTTACAAAACTCGTTTGGGCGGGAAAACTCCACGACTAAAAGATACCCGTAGTGATTTCGAATTAGAACCTAATGATGGAAAATCC 34 19094674 0.97297931 10 32 187 0.93877551 1.662757832 0.326530612 0.352941176 0.551020408 34 3 0 46 3L:19094594-19094703 6 31.5 1993 FBgn0036846 174.09 12.22333333 18.78 0.180940893 2.577038451 1.677316294 2 2 2 0.15 dme-bantam-3p 6mer3-8 TGATCT 3L 19095299 19095304 - 3L_19095299_19095304_- 0.981951785 0.982266344 0.982109064 0.000222385 CG11577 FBtr0075034 19094888 19095476 3L - 19095099 19095363 3'utr CG11577 FlyBase G38068.1 TAGTTTTTGAATGAACTCAAGCATTGACAAACTAAATGTAGTAGTTACTTAAATTCCAATGATCTTACTTTTTTTCGAAATGGAAATCATTTTAAGTTTTACCACCTATAGAACAAAGCGAAAAGTGTTTAATTAGCTTAAGTGAACTCACTATGTCTCTCAAGCTAATCTGTATAACTTCCACAACGACTGAGCCACAGAATGCTACTGAAAGTTTCGCCTGGGGCCATTGGCTTATTGATTTCGGCCACGAATTGGGGTCGAC 528 19095304 0.859162995 47 498 4850 0.951441578 1.952169501 0.059180577 0.181818182 0.344461305 528 26 6 627 3L:19095099-19095363 6 CG11577 FBtr0075034 19094888 19095476 TGATCT 6mer3-8 dme-bantam-3p 3L - 19095100 19095369 3'utr CG11577 FlyBase G28778.1 AAATTTTAGTTTTTGAATGAACTCAAGCATTGACAAACTAAATGTAGTAGTTACTTAAATTCCAATGATCTTACTTTTTTTCGAAATGGAAATCATTTTAAGTTTTACCACCTATAGAACAAAGCGAAAAGTGTTTAATTAGCTTAAGTGAACTCACTATGTCTCTCAAGCTAATCTGTATAACTTCCACAACGACTGAGCCACAGAATGCTACTGAAAGTTTCGCCTGGGGCCATTGGCTTATTGATTTCGGCCACGAATTGGGGTCGA 365 19095304 0.943204234 44 339 3358 0.931558935 2.088136089 0.034220532 0.320547945 0.52851711 365 33 3 490 3L:19095100-19095369 6 298 1994 FBgn0036847 488.3333333 44.84333333 68.4 0.610238908 6.645357913 4.356725146 0 0 0 0.15 dme-miR-999-3p 6mer2-7 GTTAAC 3L 19099421 19099426 - 3L_19099421_19099426_- 0.999820788 0.999916965 0.999868876 6.80E-05 Gem2 FBtr0330093|FBtr0075032 19099121|19099121 19099480|19099480 3L - 19099390 19099452 3'utr Gem2 FlyBase G38079.1 AATTTAAGCGCAAATTCGACTATTTTGTTAACTAAAAAGCCAAAAGCTACGCTGGTAATTTTG 14 19099427 0.980144609 8 13 96 0.941176471 0.903089987 0.058823529 0.214285714 0.352941176 14 0 1 16 3L:19099390-19099452 6 Gem2 FBtr0330093|FBtr0075032 19099121|19099121 19099480|19099480 GTTAAC 6mer2-7 dme-miR-999-3p 3L - 19099390 19099447 3'utr Gem2 FlyBase G28787.1 AAGCGCAAATTCGACTATTTTGTTAACTAAAAAGCCAAAAGCTACGCTGGTAATTTTG 14 19099427 0.689386233 8 14 96 1 1.301029996 0.1 0.428571429 0.6 14 0 0 20 3L:19099390-19099447 6 10 1995 FBgn0036850 154 17.00333333 26.24666667 0.064935065 0.588119976 0.381000762 1 1 1 0.15 dme-miR-283-5p 6mer3-8 TGATAT 3L 19257484 19257489 - 3L_19257484_19257489_- 0.999645701 0.999959724 0.999802713 0.000222032 nes FBtr0075021|FBtr0075019 19257410|19257280 19258010|19258010 3L - 19257475 19257584 3'utr nes FlyBase G38091.1 ATTTCATTTATTGAAAGGGGAGCAGCGCTCAAGGAGACTAACTAAGCCATAAAGACAGTTTTATACCAATGTAAAGATGATGCGACGATATATTTTGATATGCTCACGCT 39 19257494 0.988591338 13 29 270 0.745098039 1.579783597 0.137254902 0.282051282 0.450980392 39 13 0 38 3L:19257475-19257584 6 nes FBtr0075021|FBtr0075019 19257410|19257280 19258010|19258010 TGATAT 6mer3-8 dme-miR-283-5p 3L - 19257475 19257613 3'utr nes FlyBase G28798.1 ACACCAGGGTCTTTGAAAATCAAACTCAAATTTCATTTATTGAAAGGGGAGCAGCGCTCAAGGAGACTAACTAAGCCATAAAGACAGTTTTATACCAATGTAAAGATGATGCGACGATATATTTTGATATGCTCACGCT 33 19257493 0.986122897 13 29 241 0.906976744 1.591064607 0.186046512 0.242424242 0.418604651 33 4 0 39 3L:19257475-19257613 6 21.5 1996 FBgn0026630 1182.346667 63.70333333 97.51666667 0.018184176 0.337501962 0.220475132 5 4 4.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3L 19257803 19257809 - 3L_19257803_19257809_- 0.823349268 0.823349556 0.823349412 2.12E-07 nes FBtr0075021|FBtr0075019 19257410|19257280 19258010|19258010 3L - 19257609 19257837 3'utr nes FlyBase G38092.1 ACTTTGAACATATATATATATTGTCTGCCTAGTCAAGGTGGAGTCATCCCCTAGTATGCAGTGTGGATTTTGGCGATAAGATATTGTTTTATCTTGCCTAAGAACACATTCTCAGTCGTATATATATATATATATATAAACATTATGGAATTGTAAATTGTATAAGAGTATAAACCCGTTGAGTTCATCTAGGAACTAGACAGATCACTCGAGACTATAACGATACACC 58 19257814 0.906058157 26 52 435 0.910447761 1.785329835 0.074626866 0.120689655 0.23880597 58 6 0 61 3L:19257609-19257837 7 nes FBtr0075021|FBtr0075019 19257410|19257280 19258010|19258010 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L - 19257761 19257826 3'utr nes FlyBase G28800.1 ATATATATATTGTCTGCCTAGTCAAGGTGGAGTCATCCCCTAGTATGCAGTGTGGATTTTGGCGAT 14 19257813 0.979150593 6 13 94 1 1.278753601 0.315789474 0.214285714 0.421052632 14 0 0 19 3L:19257761-19257826 7 19.5 1997 FBgn0026630 1182.346667 63.70333333 97.51666667 0.016492625 0.306106431 0.199965818 5 4 4.5 0.15 dme-miR-1008-3p 6mer3-8 AGCTGT 3L 19262646 19262651 - 3L_19262646_19262651_- 0.99998325 0.999999902 0.999991576 1.17E-05 Max FBtr0345391|FBtr0075018 19262230|19262524 19262875|19262875 3L - 19262542 19262672 3'utr Max FlyBase G38104.1 CCGATAATCATAATCATCATTAGCTGTAAGCCCAAAATGTAACCCACCCAATCGACCTTAATTTGTATGCGTGCGTCTTTTCTACTTTCAACAAATTGTCACTCTGTGCGCAAAGAATAAAGTAAACTAGT 33 19262653 0.976903271 16 29 215 0.925 1.267171728 0.125 0.181818182 0.325 33 2 1 37 3L:19262542-19262672 6 Max FBtr0345391|FBtr0075018 19262230|19262524 19262875|19262875 AGCTGT 6mer3-8 dme-miR-1008-3p 3L - 19262613 19262672 3'utr Max FlyBase G28808.1 CCGATAATCATAATCATCATTAGCTGTAAGCCCAAAATGTAACCCACCCAATCGACCTTA 13 19262662 0.985424886 3 9 62 0.727272727 0.726998728 0.318181818 0.692307692 0.818181818 13 4 2 16 3L:19262613-19262672 6 12 1998 FBgn0017578 482.9933333 60.31 92.42333333 0.024845063 0.198971978 0.129837343 2 11 6.5 0.15 dme-miR-305-3p 6mer3-8 ATGTGC 3L 19266809 19266814 - 3L_19266809_19266814_- 0.999120336 0.999117583 0.999118959 1.91E-06 CG9629 FBtr0075017 19266471 19266836 3L - 19266779 19266828 3'utr CG9629 FlyBase G38112.1 TACGATCAATTTTAATGTGCTACAATTTACAATACTATTACATATAATGT 14 19266813 0.785005521 2 13 125 0.941176471 1.204119983 0.058823529 0.214285714 0.352941176 14 1 0 16 3L:19266779-19266828 6 CG9629 FBtr0075017 19266471 19266836 ATGTGC 6mer3-8 dme-miR-305-3p 3L - 19266757 19266826 3'utr CG9629 FlyBase G28812.1 CGATCAATTTTAATGTGCTACAATTTACAATACTATTACATATAATGTCCAAAACTAAATGCAACTGATA 15 19266813 0.9873988 5 15 127 1 1.278753601 0.210526316 0.2 0.368421053 15 0 0 19 3L:19266757-19266826 6 11.5 1999 FBgn0036857 368.37 21.64666667 32.97666667 0.031218612 0.531259624 0.348731426 -1 -1 -1 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3L 19282573 19282579 - 3L_19282573_19282579_- 0.819681141 0.816851145 0.818266143 0.002001112 Gbs-76A FBtr0332155|FBtr0345390|FBtr0075014|FBtr0331425 19281926|19281362|19281926|19281926 19283222|19283222|19283222|19283222 3L - 19282542 19282595 3'utr Gbs-76A FlyBase G38123.1 AAGGTTCGAATGAATCCCAAAGATAGTTGTTAGTCGTATGTTATAAGAAGAGCA 43 19282581 0.952838037 10 33 345 0.755555556 1.230448921 0.355555556 0.046511628 0.088888889 43 10 1 34 3L:19282542-19282595 7 Gbs-76A FBtr0331425|FBtr0075014|FBtr0345390|FBtr0332155 19281926|19281926|19281362|19281926 19283222|19283222|19283222|19283222 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 19282525 19282599 3'utr Gbs-76A FlyBase G28818.1 CAGCAAGGTTCGAATGAATCCCAAAGATAGTTGTTAGTCGTATGTTATAAGAAGAGCAAGTGATAACAAACTAAA 23 19282581 0.98783679 5 21 186 0.80952381 1.531478917 0.30952381 0.565217391 0.761904762 23 8 0 34 3L:19282525-19282599 7 28 2000 FBgn0036862 172.6666667 4.483333333 6.786666667 0.162162162 6.24535316 4.125736739 2 2 2 0.15 dme-miR-318-3p 6mer3-8 CCCAGT 3L 19450132 19450137 + 3L_19450132_19450137_+ 0.849190215 0.914822719 0.882006467 0.046409186 Chd3 FBtr0074998 19449926 19450238 3L + 19450096 19450148 3'utr Chd3 FlyBase G31353.1 ACTATTACTTTTTTGTTCGACTGTAACAATTTTTCGCCCAGTAAATATTCTAT 14 19450128 0.751318797 5 14 132 1 1.255272505 0 0.142857143 0.333333333 14 0 0 18 3L:19450096-19450148 6 Chd3 FBtr0074998 19449926 19450238 CCCAGT 6mer3-8 dme-miR-318-3p 3L + 19450084 19450144 3'utr Chd3 FlyBase G23708.1 AGTAATAGCAGTACTATTACTTTTTTGTTCGACTGTAACAATTTTTCGCCCAGTAAATATT 14 19450128 0.987237627 5 12 110 0.95 1.278753601 0.05 0.285714286 0.5 14 1 0 19 3L:19450084-19450144 6 9.5 2001 FBgn0023395 212.48 8.483333333 13.1 0.04471009 1.119842829 0.72519084 4 4 4 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 1950373 1950378 - 3L_1950373_1950378_- 0.776912226 0.786373202 0.781642714 0.006689937 mv FBtr0304060 1950304 1950578 3L - 1950355 1950426 3'utr mv FlyBase G33597.1 AAGATTCCTAGGCTTAGGTCTCATAGAGCTGTAAAATACACCTTTTGTACCAAAACTTTATATTATTATTAC 12 1950381 0.982084297 4 12 95 1 1.113943352 0 0.083333333 0.153846154 12 0 0 13 3L:1950355-1950426 6 mv FBtr0304060 1950304 1950578 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 1950357 1950423 3'utr mv FlyBase G25406.1 ATTCCTAGGCTTAGGTCTCATAGAGCTGTAAAATACACCTTTTGTACCAAAACTTTATATTATTATT 9 1950381 0.965160699 5 9 67 1 1.113943352 0.076923077 0.444444444 0.615384615 9 0 0 13 3L:1950357-1950423 6 7 2002 FBgn0265988 597.23 6.253333333 9.486666667 0.011720778 1.119402985 0.737877723 3 3 3 0.15 dme-miR-283-5p 8mer-m1 TGATATTT 3L 19585131 19585138 - 3L_19585131_19585138_- 0.555580537 0.555516123 0.55554833 4.55E-05 CG9231 FBtr0074972|FBtr0344994 19585091|19585091 19585473|19585473 3L - 19585103 19585150 3'utr CG9231 FlyBase G38172.1 ATAGATATTCAGTGATATTTGTAATGTTGTATTATCAAAAATAAAACA 17 19585143 0.98674877 8 14 145 0.85 0.753327667 0.05 0.176470588 0.3 17 1 2 17 3L:19585103-19585150 8 CG9231 FBtr0074972|FBtr0344994 19585091|19585091 19585473|19585473 TGATATTT 8mer-m1 dme-miR-283-5p 3L - 19585118 19585150 3'utr CG9231 FlyBase G28850.1 ATAGATATTCAGTGATATTTGTAATGTTGTATT 7 19585143 0.957875442 3 7 63 1 1.079181246 0 0.428571429 0.666666667 7 0 0 12 3L:19585118-19585150 8 10.5 2003 FBgn0036887 129 20.06333333 30.59 0.081395349 0.523342748 0.343249428 5 5 5 0.15 dme-miR-277-3p 6mer3-8 TGCATT 3L 19590925 19590930 - 3L_19590925_19590930_- 0.999724471 0.998849346 0.999286908 0.00061886 ash1 FBtr0306010|FBtr0306009 19590771|19590771 19591301|19591301 3L - 19590912 19590976 3'utr ash1 FlyBase G38179.1 CAAAACTATCCCCCTCTCGTCTTTGCAATTGAAGGCGTTTGACTTTTGCATTGTTATTTTAAATT 46 19590931 0.776344362 12 45 362 0.984615385 1.505149978 0.061538462 0.326086957 0.523076923 46 0 1 64 3L:19590912-19590976 6 ash1 FBtr0306010|FBtr0306009 19590771|19590771 19591301|19591301 TGCATT 6mer3-8 dme-miR-277-3p 3L - 19590911 19590975 3'utr ash1 FlyBase G28856.1 AAAACTATCCCCCTCTCGTCTTTGCAATTGAAGGCGTTTGACTTTTGCATTGTTATTTTAAATTA 35 19590931 0.738578334 7 35 283 1 1.698970004 0.08 0.285714286 0.5 35 0 0 50 3L:19590911-19590975 6 35.5 2004 FBgn0005386 720.8833333 11.4 17.44333333 0.049245139 3.114035088 2.035161475 1 1 1 0.15 dme-miR-282-5p 6mer3-8 AGAGGC 3L 19591250 19591255 - 3L_19591250_19591255_- 0.999999722 0.999981397 0.999990559 1.29E-05 ash1 FBtr0306010|FBtr0306009 19590771|19590771 19591301|19591301 3L - 19591219 19591308 stop_codon ash1 FlyBase G38181.1 AACATAACCGATGTAACGCGAGTAGATTAAGCCGTGTATATACGCCTAAAGTTAGAGGCATTGATTAATATTTATGGAACTTCAATTAAC 24 19591256 0.976446475 8 24 156 1 1.447158031 0.142857143 0.166666667 0.285714286 24 0 0 28 3L:19591219-19591308 6 ash1 FBtr0306010|FBtr0306009 19590771|19590771 19591301|19591301 AGAGGC 6mer3-8 dme-miR-282-5p 3L - 19591243 19591275 3'utr ash1 FlyBase G28858.1 GTGTATATACGCCTAAAGTTAGAGGCATTGATT 12 19591256 0.78400722 5 11 82 0.909090909 1.301029996 0.181818182 0.416666667 0.681818182 12 2 0 20 3L:19591243-19591275 6 15 2005 FBgn0005386 720.8833333 11.4 17.44333333 0.020807805 1.315789474 0.859927384 1 1 1 0.15 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3L 19613357 19613364 + 3L_19613357_19613364_+ 0.627498186 0.62943054 0.628464363 0.001366342 CG9376 FBtr0074946 19613260 19613489 3L + 19613339 19613424 3'utr CG9376 FlyBase G31405.1 AACCACGTCATCATCCCGTCTAGTCAGCAGCTTAGGAACTACCAAAAAGCAATTACCACTTTAATGTTACATGTTTAATCATATTA 85 19613352 0.971182698 12 82 478 0.961538462 1.698970004 0.259615385 0.176470588 0.326923077 85 3 1 100 3L:19613339-19613424 8 CG9376 FBtr0074946 19613260 19613489 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L + 19613337 19613390 3'utr CG9376 FlyBase G23745.1 AGAACCACGTCATCATCCCGTCTAGTCAGCAGCTTAGGAACTACCAAAAAGCAA 51 19613352 0.939950201 8 46 277 0.902439024 1.568201724 0.182926829 0.450980392 0.658536585 51 7 1 74 3L:19613337-19613390 8 63 2006 FBgn0036893 103 12.34333333 18.84333333 0.611650485 5.103969754 3.343357509 5 5 5 0.15 dme-miR-79-3p 6mer3-8 TAGCTT 3L 19624535 19624540 - 3L_19624535_19624540_- 0.99999826 0.999995381 0.99999682 2.05E-06 wnd FBtr0074965|FBtr0074963|FBtr0074964 19624404|19624404|19624404 19625547|19625547|19625547 3L - 19624472 19624554 3'utr wnd FlyBase G38236.1 ACTAGTTGGATGTTTAGCTTCGTAAGATGTGTCGTTCCTTTGTGGGCGACGTTTCTCTACATTATGTAAATGTACTTCATATT 10 19624541 0.987436245 7 10 88 1 1.113943352 0.076923077 0.2 0.384615385 10 0 0 13 3L:19624472-19624554 6 wnd FBtr0074964|FBtr0074965|FBtr0074963 19624404|19624404|19624404 19625547|19625547|19625547 TAGCTT 6mer3-8 dme-miR-79-3p 3L - 19624494 19624555 3'utr wnd FlyBase G28897.1 CACTAGTTGGATGTTTAGCTTCGTAAGATGTGTCGTTCCTTTGTGGGCGACGTTTCTCTACA 6 19624540 0.984860413 5 6 46 1 0.954242509 0.444444444 0.5 0.666666667 6 0 0 9 3L:19624494-19624555 6 5 2007 FBgn0036896 311 9.553333333 14.51666667 0.01607717 0.52337753 0.344431688 1 0 0.5 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 3L 19625252 19625258 - 3L_19625252_19625258_- 0.620030347 0.620204264 0.620117306 0.000123037 wnd FBtr0074965|FBtr0074963|FBtr0074964 19624404|19624404|19624404 19625547|19625547|19625547 3L - 19625231 19625312 3'utr wnd FlyBase G38241.1 AAACCCTTTTGGGTTCTTTGGGGCGATCTTTGTCCGTGTCGTACTCGTATCGCATGCATTTCCTATTTTGCTAAATATAATT 23 19625258 0.989371264 11 23 235 1 1.397940009 0.2 0.086956522 0.16 23 0 0 25 3L:19625231-19625312 7 wnd FBtr0074964|FBtr0074965|FBtr0074963 19624404|19624404|19624404 19625547|19625547|19625547 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 19625236 19625312 3'utr wnd FlyBase G28901.1 AAACCCTTTTGGGTTCTTTGGGGCGATCTTTGTCCGTGTCGTACTCGTATCGCATGCATTTCCTATTTTGCTAAATA 15 19625258 0.900700155 9 15 156 1 1.431363764 0.185185185 0.533333333 0.740740741 15 0 0 27 3L:19625236-19625312 7 15 2008 FBgn0036896 311 9.553333333 14.51666667 0.048231511 1.570132589 1.033295063 0 0 0 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 19638706 19638711 - 3L_19638706_19638711_- 0.999342174 0.999945823 0.999643999 0.00042681 CG8786 FBtr0331862|FBtr0331862|FBtr0331862 19637205|19637205|19637205 19639572|19639572|19639572 3L - 19638688 19638774 5'utr CG8786 FlyBase G38261.1 CAGGGGAATCAGATGCAGTATTAATTATTAAGTCGCCGTGAAGTGCGTTAAACAAAAACATTTCTGTGACAGTTGAATATATTGATA 132 19638713 0.903648385 11 127 860 0.963414634 2.198657087 0.109756098 0.181818182 0.341463415 132 6 0 158 3L:19638688-19638774 6 CG8786 FBtr0331862|FBtr0331862|FBtr0331862 19637205|19637205|19637205 19639572|19639572|19639572 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 19638668 19638773 5'utr CG8786 FlyBase G28916.1 AGGGGAATCAGATGCAGTATTAATTATTAAGTCGCCGTGAAGTGCGTTAAACAAAAACATTTCTGTGACAGTTGAATATATTGATATTTTGTATACTCTAAGTTGC 73 19638713 0.922138269 11 70 511 0.95412844 2.017033339 0.110091743 0.328767123 0.550458716 73 5 0 104 3L:19638668-19638773 6 80 2009 FBgn0036897 334.61 15.00666667 22.97333333 0.239084307 5.330964016 3.482298317 2 2 2 0.15 dme-miR-304-5p 7mer-m8 TGAGATT 3L 19714622 19714628 - 3L_19714622_19714628_- 0.620203325 0.620198161 0.620200743 3.61E-06 Trpml FBtr0074952 19714416 19715268 3L - 19714583 19714648 3'utr Trpml FlyBase G38288.1 AACTGCACTGGTCGACAAAATGAGATTTTTGGCAGTCTAAGCAAATAGTTATTTTAGAAAGTGTTT 8 19714628 0.983870499 4 6 54 0.9 0.954242509 0.1 0.25 0.4 8 1 0 9 3L:19714583-19714648 7 Trpml FBtr0074952 19714416 19715268 TGAGATT 7mer-m8 dme-miR-304-5p 3L - 19714603 19714645 3'utr Trpml FlyBase G28933.1 TGCACTGGTCGACAAAATGAGATTTTTGGCAGTCTAAGCAAAT 5 19714628 0.982196204 3 4 33 0.857142857 0.77815125 0.142857143 0.4 0.571428571 5 1 0 6 3L:19714603-19714645 7 5.5 2010 FBgn0262516 372.8066667 14.61333333 22.29666667 0.014752955 0.376368613 0.246673643 0 0 0 0.15 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3L 19720015 19720022 - 3L_19720015_19720022_- 0.624581671 0.626921555 0.625751613 0.001654559 CG42637 FBtr0302279|FBtr0302277|FBtr0302278 19719525|19719525|19719525 19720443|19720443|19720443 3L - 19719982 19720036 3'utr CG42637 FlyBase G38300.1 AGCCGAAAAAACCGTCTAGTCACAAGGTCTTCAGACTAGTTATTGTTTTATATAA 10 19720022 0.965434724 3 9 52 0.9375 0.875061263 0.5625 0.5 0.6875 10 0 1 15 3L:19719982-19720036 8 CG42637 FBtr0302278|FBtr0302277|FBtr0302279 19719525|19719525|19719525 19720443|19720443|19720443 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L - 19719992 19720036 3'utr CG42637 FlyBase G28943.1 AGCCGAAAAAACCGTCTAGTCACAAGGTCTTCAGACTAGTTATTG 11 19720022 0.937541916 4 11 43 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 3L:19719992-19720036 8 9.5 2011 FBgn0261360 1575.906667 29.86333333 45.63333333 0.006028276 0.318115861 0.208181154 0 0 0 0.15 dme-miR-304-5p 7mer-m8 TGAGATT 3L 19746038 19746044 - 3L_19746038_19746044_- 0.618893067 0.62020342 0.619548243 0.000926522 CG42638 FBtr0302283 19745832 19746684 3L - 19746023 19746063 5'utr CG42638 FlyBase G38320.1 ACTGCACTGGTCGACAAAATGAGATTTTTGGCAGTCTAAGC 8 19746044 0.957016742 2 8 61 1 0.954242509 0.111111111 0.125 0.222222222 8 0 0 9 3L:19746023-19746063 7 CG42638 FBtr0302283 19745832 19746684 TGAGATT 7mer-m8 dme-miR-304-5p 3L - 19746021 19746062 5'utr CG42638 FlyBase G28957.1 CTGCACTGGTCGACAAAATGAGATTTTTGGCAGTCTAAGCAA 8 19746036 0.830166943 3 7 51 0.9 0.954242509 0.3 0.25 0.4 8 1 0 9 3L:19746021-19746062 7 8 2012 FBgn0261361 372.8066667 14.61333333 22.29666667 0.021458844 0.547445255 0.358798027 0 -8 -4 0.15 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3L 19751431 19751438 - 3L_19751431_19751438_- 0.629817135 0.624418113 0.627117624 0.00381767 Gyc76C FBtr0333879|FBtr0302280|FBtr0302282|FBtr0302281 19750941|19750941|19750941|19750941 19751859|19751859|19751859|19751859 3L - 19751388 19751454 3'utr Gyc76C FlyBase G38332.1 GAAGCCGAAAAAACCGTCTAGTCACAAGGTCTTCAGACTAGTTATTGTTTTATATAAAATAAACACA 15 19751438 0.955641751 5 14 72 0.9375 0.875061263 0.3125 0.066666667 0.125 15 0 1 15 3L:19751388-19751454 8 Gyc76C FBtr0302282|FBtr0302281|FBtr0333879|FBtr0302280 19750941|19750941|19750941|19750941 19751859|19751859|19751859|19751859 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L - 19751401 19751455 3'utr Gyc76C FlyBase G28967.1 AGAAGCCGAAAAAACCGTCTAGTCACAAGGTCTTCAGACTAGTTATTGTTTTATA 12 19751438 0.962288132 4 11 58 0.941176471 1.204119983 0.058823529 0.25 0.470588235 12 1 0 16 3L:19751401-19751455 8 11.5 2013 FBgn0266136 1575.906667 29.86333333 45.63333333 0.007297386 0.385087621 0.252008766 0 0 0 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA 3L 19803083 19803090 + 3L_19803083_19803090_+ 0.623194014 0.622039961 0.622616987 0.000816001 Ir76a FBtr0301606 19802012 19803427 3L + 19803049 19803098 3'utr Ir76a FlyBase G31441.1 AGCGGCTGAAACTTATGGTGGATGATATTTACTTTGCATTTACGGTGGCG 10 19803082 0.753568534 4 10 77 1 1.146128036 0.714285714 0.4 0.571428571 10 0 0 14 3L:19803049-19803098 8 Ir76a FBtr0301606 19802012 19803427 TGCATTTA 8mer-A1 dme-miR-277-3p 3L + 19803041 19803099 3'utr Ir76a FlyBase G23784.1 TGCCCTAAAGCGGCTGAAACTTATGGTGGATGATATTTACTTTGCATTTACGGTGGCGT 7 19803081 0.983702874 4 6 50 1 1 0.4 0.285714286 0.5 7 0 0 10 3L:19803041-19803099 8 5 2014 FBgn0260874 218.0066667 15.19666667 23.07666667 0.022935078 0.329019522 0.216669074 1 2 1.5 0.15 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3L 19810499 19810505 - 3L_19810499_19810505_- 0.620171106 0.620165232 0.620168169 4.17E-06 Cyp305a1 FBtr0074925 19810401 19810551 3L - 19810466 19810521 3'utr Cyp305a1 FlyBase G38376.1 TATAGGTCAAGAGATATGGTGCTGAATCCACTAGGATATTTCCAAGGATTCCGAAA 97 19810505 0.962216806 8 96 501 0.991735537 1.77815125 0.074380165 0.206185567 0.363636364 97 0 1 120 3L:19810466-19810521 7 Cyp305a1 FBtr0074925 19810401 19810551 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3L - 19810465 19810536 3'utr Cyp305a1 FlyBase G28998.1 CGATGGTGTCGGTATTATAGGTCAAGAGATATGGTGCTGAATCCACTAGGATATTTCCAAGGATTCCGAAAA 69 19810505 0.966688779 6 65 351 0.96 1.681241237 0.15 0.333333333 0.54 69 3 1 96 3L:19810465-19810536 7 80 2015 FBgn0036910 2.666666667 0.18 0.286666667 30 444.4444444 279.0697674 0 0 0 0.15 dme-miR-1003-3p 7mer-A1 TGTGAGA 3L 19816446 19816452 - 3L_19816446_19816452_- 0.5966305 0.596664121 0.596647311 2.38E-05 Fibp FBtr0332728 19816163 19816661 3L - 19816440 19816486 5'utr Fibp FlyBase G38390.1 CAATCGGGAGCTGCGCGATCTTTTCGTCGATCTCTGTGAGAAGCTTA 53 19816452 0.776996573 9 50 428 0.952380952 1.77815125 0.142857143 0.150943396 0.285714286 53 3 0 60 3L:19816440-19816486 7 Fibp FBtr0332728 19816163 19816661 TGTGAGA 7mer-A1 dme-miR-1003-3p 3L - 19816398 19816483 5'utr Fibp FlyBase G29003.1 TCGGGAGCTGCGCGATCTTTTCGTCGATCTCTGTGAGAAGCTTATTGATCCTTGGCGTCAGAATGGCTGGAACCGTGAGCAAGTGA 39 19816452 0.782832515 8 37 298 0.964285714 1.431363764 0.178571429 0.358974359 0.553571429 39 1 1 54 3L:19816398-19816483 7 42 2016 FBgn0036911 257 25.10333333 38.12666667 0.163424125 1.673084584 1.101591187 0 0 0 0.15 dme-miR-14-3p 6mer2-7 AGACTG 3L 19829848 19829853 + 3L_19829848_19829853_+ 0.9801568 0.999947673 0.990052237 0.01399428 Deaf1 FBtr0332153 19829189 19830686 3L + 19829804 19829872 3'utr Deaf1 FlyBase G31466.1 TCTGAAATTACCATACATATTCGTCGATGTATACACTTTTCATTAGACTGTAAGCGCATAGTTAAACTT 30 19829846 0.986658708 7 29 255 0.967741935 1.477121255 0.35483871 0.033333333 0.064516129 30 1 0 30 3L:19829804-19829872 6 Deaf1 FBtr0332153 19829189 19830686 AGACTG 6mer2-7 dme-miR-14-3p 3L + 19829833 19829865 3'utr Deaf1 FlyBase G23803.1 TATACACTTTTCATTAGACTGTAAGCGCATAGT 11 19829846 0.678610043 2 11 85 1 1.113943352 0.384615385 0.181818182 0.307692308 11 0 0 13 3L:19829833-19829865 6 19.5 2017 FBgn0013799 381.6666667 13.13 20 0.051091703 1.485148515 0.975 2 2 2 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3L 19831866 19831872 - 3L_19831866_19831872_- 0.521198625 0.521187779 0.521193202 7.64E-06 trc FBtr0074922|FBtr0332154 19831389|19830862 19832075|19832075 3L - 19831841 19831935 3'utr trc FlyBase G38394.1 AAATCCCCGATTTTCCTTTTTGAATGTCTTACCTACATGTGTATTTAAATACTAGCTAACATTTGTGATTCCAAACAAGAGAAGAATATGATAAC 71 19831873 0.982442607 11 70 526 0.988636364 1.939519253 0.011363636 0.197183099 0.352272727 71 1 0 87 3L:19831841-19831935 7 trc FBtr0074922|FBtr0332154 19831389|19830862 19832075|19832075 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 19831853 19831896 3'utr trc FlyBase G29007.1 TGTATTTAAATACTAGCTAACATTTGTGATTCCAAACAAGAGAA 35 19831873 0.916829377 6 31 258 0.865384615 1.653212514 0.019230769 0.371428571 0.576923077 35 7 0 45 3L:19831853-19831896 7 48.5 2018 FBgn0003744 320.6866667 15.89666667 24.39333333 0.151237969 3.050954078 1.988248155 1 1 1 0.15 dme-miR-283-5p 8mer-A1 TGATATTA 3L 19867555 19867562 - 3L_19867555_19867562_- 0.591179672 0.576583533 0.583881602 0.010321072 Rab8 FBtr0074921 19867486 19868552 3L - 19867542 19867607 3'utr Rab8 FlyBase G38404.1 AGTAATATAAATAATGTGAAATTAAATGATAACTAATTGCATATTTGATATTAATTAATTACTTGT 16 19867563 0.776200893 8 16 139 1 1.322219295 0.047619048 0.1875 0.380952381 16 0 0 21 3L:19867542-19867607 8 Rab8 FBtr0074921 19867486 19868552 TGATATTA 8mer-A1 dme-miR-283-5p 3L - 19867548 19867628 3'utr Rab8 FlyBase G29014.1 TTATGAACACATACACAGCGCAGTAATATAAATAATGTGAAATTAAATGATAACTAATTGCATATTTGATATTAATTAATT 12 19867569 0.986614097 9 11 94 0.9375 1.176091259 0.0625 0.333333333 0.5 12 1 0 15 3L:19867548-19867628 8 4.5 2019 FBgn0262518 1251.336667 71.43666667 109.69 0.003596155 0.062992861 0.041024706 1 7 4 0.15 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 19867589 19867594 - 3L_19867589_19867594_- 0.894684327 0.836780784 0.865732555 0.040943958 Rab8 FBtr0074921 19867486 19868552 3L - 19867542 19867607 3'utr Rab8 FlyBase G38404.1 AGTAATATAAATAATGTGAAATTAAATGATAACTAATTGCATATTTGATATTAATTAATTACTTGT 16 19867596 0.776200893 8 16 139 1 1.322219295 0.047619048 0.1875 0.380952381 16 0 0 21 3L:19867542-19867607 6 Rab8 FBtr0074921 19867486 19868552 ATGTGA 6mer3-8 dme-miR-1003-3p 3L - 19867548 19867628 3'utr Rab8 FlyBase G29014.1 TTATGAACACATACACAGCGCAGTAATATAAATAATGTGAAATTAAATGATAACTAATTGCATATTTGATATTAATTAATT 12 19867595 0.986614097 9 11 94 0.9375 1.176091259 0.0625 0.333333333 0.5 12 1 0 15 3L:19867548-19867628 6 8 2020 FBgn0262518 1251.336667 71.43666667 109.69 0.006393164 0.111987308 0.072932811 2 1 1.5 0.15 dme-miR-307a-3p 6mer3-8 GGTTGT 3L 19868102 19868107 - 3L_19868102_19868107_- 0.999513669 0.998216538 0.998865103 0.000917259 Rab8 FBtr0308832|FBtr0308833|FBtr0074921 19868034|19867706|19867486 19868552|19868552|19868552 3L - 19868080 19868183 3'utr Rab8 FlyBase G38408.1 AGCCAATCCAACCCGCCCGCGTCCTTCTCGAAGAGGTTTTAGTATTTACGGAATTATGATTTTCTCTAGCAGCCATGGTTGTCGATTTGTAAATTATTAATTGT 61 19868107 0.809993318 17 60 451 0.986842105 1.875061263 0.078947368 0.213114754 0.368421053 61 1 0 75 3L:19868080-19868183 6 Rab8 FBtr0308832|FBtr0308833|FBtr0074921 19868034|19867706|19867486 19868552|19868552|19868552 GGTTGT 6mer3-8 dme-miR-307a-3p 3L - 19868086 19868179 3'utr Rab8 FlyBase G29019.1 AATCCAACCCGCCCGCGTCCTTCTCGAAGAGGTTTTAGTATTTACGGAATTATGATTTTCTCTAGCAGCCATGGTTGTCGATTTGTAAATTATT 33 19868107 0.984224098 10 31 247 0.906976744 1.591064607 0.11627907 0.242424242 0.418604651 33 4 0 39 3L:19868086-19868179 6 32 2021 FBgn0262518 1251.336667 71.43666667 109.69 0.025572654 0.447949232 0.291731243 0 0 0 0.15 dme-miR-932-5p 6mer2-7 GAATTG 3L 19881258 19881263 + 3L_19881258_19881263_+ 0.997319943 0.982810535 0.990065239 0.010259695 CG8334 FBtr0332148|FBtr0332149|FBtr0332150|FBtr0332151 19881066|19881066|19881066|19881066 19881783|19881783|19881783|19881783 3L + 19881163 19881380 3'utr CG8334 FlyBase G31529.1 TTGTTATTTACTATTCTAAGCCTATTTTGATTTTCTGCAATAGTTGATTAATTATCCCCTAATTAGTTTTAGGACGAATTATTTTTCTTTGCCGAGAATTGTGTAATGCATGTAATATACAATATTCATATTTAGCTTGTAGATGATATGTTATATTGGTTGGCCAATGTGGAGCTTAGGTTGTTACGCCGAACAAATCCATTCTCAATAGTTTCTTG 42 19881252 0.987587027 19 40 368 0.980769231 1.40654018 0.326923077 0.214285714 0.365384615 42 0 1 51 3L:19881163-19881380 6 CG8334 FBtr0332150|FBtr0332151|FBtr0332148|FBtr0332149 19881066|19881066|19881066|19881066 19881783|19881783|19881783|19881783 GAATTG 6mer2-7 dme-miR-932-5p 3L + 19881214 19881282 3'utr CG8334 FlyBase G23841.1 TTATCCCCTAATTAGTTTTAGGACGAATTATTTTTCTTTGCCGAGAATTGTGTAATGCATGTAATATAC 12 19881252 0.987598913 8 11 112 0.947368421 0.954242509 0.421052632 0.333333333 0.578947368 12 0 1 18 3L:19881214-19881282 6 10.5 2022 FBgn0036913 1095.78 21.01 32.23333333 0.009582215 0.499762018 0.325749741 6 6 6 0.15 dme-miR-1007-3p 7mer-A1 GAGCTTA 3L 19881334 19881340 + 3L_19881334_19881340_+ 0.776058533 0.809689155 0.792873844 0.023780496 CG8334 FBtr0332148|FBtr0332149|FBtr0332150|FBtr0332151 19881066|19881066|19881066|19881066 19881783|19881783|19881783|19881783 3L + 19881163 19881380 3'utr CG8334 FlyBase G31529.1 TTGTTATTTACTATTCTAAGCCTATTTTGATTTTCTGCAATAGTTGATTAATTATCCCCTAATTAGTTTTAGGACGAATTATTTTTCTTTGCCGAGAATTGTGTAATGCATGTAATATACAATATTCATATTTAGCTTGTAGATGATATGTTATATTGGTTGGCCAATGTGGAGCTTAGGTTGTTACGCCGAACAAATCCATTCTCAATAGTTTCTTG 42 19881330 0.987587027 19 40 368 0.980769231 1.40654018 0.326923077 0.214285714 0.365384615 42 0 1 51 3L:19881163-19881380 7 CG8334 FBtr0332150|FBtr0332151|FBtr0332148|FBtr0332149 19881066|19881066|19881066|19881066 19881783|19881783|19881783|19881783 GAGCTTA 7mer-A1 dme-miR-1007-3p 3L + 19881286 19881374 3'utr CG8334 FlyBase G23842.1 ATTCATATTTAGCTTGTAGATGATATGTTATATTGGTTGGCCAATGTGGAGCTTAGGTTGTTACGCCGAACAAATCCATTCTCAATAGT 20 19881330 0.983753568 10 16 124 0.903225806 1.447158031 0.225806452 0.45 0.64516129 20 3 0 28 3L:19881286-19881374 7 12 2023 FBgn0036913 1095.78 21.01 32.23333333 0.010951103 0.571156592 0.372285419 4 4 4 0.15 dme-miR-932-5p 6mer3-8 GGAATT 3L 19881472 19881477 + 3L_19881472_19881477_+ 1 0.999999589 0.999999794 2.83E-07 CG8334 FBtr0332148|FBtr0332149|FBtr0332150|FBtr0332151 19881066|19881066|19881066|19881066 19881783|19881783|19881783|19881783 3L + 19881448 19881489 3'utr CG8334 FlyBase G31531.1 ATTATTTATGCCAGACCATGTCGTGGAATTCCATTTAATTTG 8 19881476 0.727539148 3 7 68 0.875 0.84509804 0.25 0 0 8 1 0 7 3L:19881448-19881489 6 CG8334 FBtr0332150|FBtr0332151|FBtr0332148|FBtr0332149 19881066|19881066|19881066|19881066 19881783|19881783|19881783|19881783 GGAATT 6mer3-8 dme-miR-932-5p 3L + 19881452 19881495 3'utr CG8334 FlyBase G23844.1 TTTATGCCAGACCATGTCGTGGAATTCCATTTAATTTGTAATTA 5 19881476 0.970495464 5 5 47 1 0.84509804 0.142857143 0.4 0.571428571 5 0 0 7 3L:19881452-19881495 6 6 2024 FBgn0036913 1095.78 21.01 32.23333333 0.005475552 0.285578296 0.186142709 -4 -4 -4 0.15 dme-miR-8-3p 6mer2-7 AGTATT 3L 19881695 19881700 + 3L_19881695_19881700_+ 0.942446697 0.926320371 0.934383534 0.011403016 CG8334 FBtr0332148|FBtr0332149|FBtr0332150|FBtr0332151 19881066|19881066|19881066|19881066 19881783|19881783|19881783|19881783 3L + 19881646 19881730 3'utr CG8334 FlyBase G31534.1 ATGTATTGATTGGCTTGTGTGACGCGCCGAGCAGATTCGGTTCGAAATTAGTATTGCGCTTATCAATTATGACTTCAATATGTCT 36 19881699 0.72950374 10 34 318 0.95 1.579783597 0.125 0.083333333 0.175 36 2 0 38 3L:19881646-19881730 6 CG8334 FBtr0332150|FBtr0332151|FBtr0332148|FBtr0332149 19881066|19881066|19881066|19881066 19881783|19881783|19881783|19881783 AGTATT 6mer2-7 dme-miR-8-3p 3L + 19881680 19881725 3'utr CG8334 FlyBase G23846.1 ATTCGGTTCGAAATTAGTATTGCGCTTATCAATTATGACTTCAATA 24 19881699 0.7325839 6 23 181 0.945945946 1.544068044 0.027027027 0.375 0.594594595 24 2 0 35 3L:19881680-19881725 6 22 2025 FBgn0036913 1095.78 21.01 32.23333333 0.020077023 1.047120419 0.682523268 -4 -4 -4 0.15 dme-bantam-3p 7mer-A1 GATCTCA 3L 19882166 19882172 - 3L_19882166_19882172_- 0.656340712 0.788054477 0.722197595 0.093135721 Mi-2 FBtr0100394|FBtr0302046|FBtr0074919|FBtr0332152 19882049|19882049|19882049|19882049 19882448|19882448|19882448|19882448 3L - 19882154 19882247 3'utr Mi-2 FlyBase G38423.1 TGCAAAACGTTTGACACTTGGCGAATGGCGAGTTCGGTGTTTCCAGGCTTCGGTTTCTGCTCCTGGGGCGGATCGGATCTCAGCAGAGCACGAC 12 19882194 0.969452458 7 11 65 1 1.230448921 0.117647059 0.333333333 0.529411765 12 0 0 17 3L:19882154-19882247 7 Mi-2 FBtr0100394|FBtr0302046|FBtr0074919|FBtr0332152 19882049|19882049|19882049|19882049 19882448|19882448|19882448|19882448 GATCTCA 7mer-A1 dme-bantam-3p 3L - 19882155 19882197 3'utr Mi-2 FlyBase G29028.1 CGGTTTCTGCTCCTGGGGCGGATCGGATCTCAGCAGAGCACGA 11 19882194 0.966642918 2 9 56 0.705882353 1.079181246 0.352941176 0.363636364 0.588235294 11 5 0 12 3L:19882155-19882197 7 8.5 2026 FBgn0262519 3000.776667 56.31 86.75333333 0.0028326 0.150950098 0.097978944 22 22 22 0.15 dme-miR-277-3p 6mer2-7 GCATTT 3L 19912425 19912430 + 3L_19912425_19912430_+ 0.999241086 0.986003274 0.99262218 0.009360538 Prp3 FBtr0074892|FBtr0074891 19912327|19912327 19912504|19912504 3L + 19912382 19912459 3'utr Prp3 FlyBase G31537.1 TCGGAAAGATACAAGTCTGAATTAAAGTTTTGAAGCGCGCTACGCATTTGATGTTATTATTTTCGAAGCTATTCGGAA 18 19912429 0.980944524 9 15 109 0.884615385 1.361727836 0.192307692 0.222222222 0.461538462 18 3 0 23 3L:19912382-19912459 6 Prp3 FBtr0074892|FBtr0074891 19912327|19912327 19912504|19912504 GCATTT 6mer2-7 dme-miR-277-3p 3L + 19912387 19912436 3'utr Prp3 FlyBase G23847.1 AAGATACAAGTCTGAATTAAAGTTTTGAAGCGCGCTACGCATTTGATGTT 9 19912429 0.990492863 4 6 60 0.777777778 1.146128036 0.555555556 0.555555556 0.777777778 9 4 0 14 3L:19912387-19912436 6 10.5 2027 FBgn0036915 320.61 18.75 28.82333333 0.03275007 0.56 0.364288192 -4 -4 -4 0.15 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3L 19918636 19918642 - 3L_19918636_19918642_- 0.803339823 0.808818556 0.80607919 0.003874097 Su(z)12 FBtr0074917|FBtr0074917|FBtr0074916|FBtr0074916 19918240|19918240|19918240|19918240 19919000|19919000|19919365|19919365 3L - 19918544 19918662 3'utr Su(z)12 FlyBase G38492.1 TTTAATTCTAATTTGGCAGTTACTTAAACTTAACAAATCTACAGGGCTAATGGAAAATCAAAATTCAAAATCGATTTGAATTCCCATGCTTACACTTCACATCCGGTTTGGATTGTGTA 24 19918650 0.98759471 11 24 205 1 1.447158031 0 0.166666667 0.285714286 24 0 0 28 3L:19918544-19918662 7 Su(z)12 FBtr0074916|FBtr0074916|FBtr0074917|FBtr0074917 19918240|19918240|19918240|19918240 19919365|19919365|19919000|19919000 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3L - 19918622 19918667 3'utr Su(z)12 FlyBase G29079.1 TATACTTTAATTCTAATTTGGCAGTTACTTAAACTTAACAAATCTA 19 19918648 0.723865686 5 18 173 0.896551724 1.414973348 0 0.315789474 0.551724138 19 3 0 26 3L:19918622-19918667 7 18 2028 FBgn0020887 388.31 12.01333333 18.55333333 0.046354717 1.498335183 0.970176069 8 6 7 0.15 dme-miR-34-5p 8mer-A1 CACTGCCA 3L 19919163 19919170 - 3L_19919163_19919170_- 0.678388408 0.678375355 0.678381882 9.19E-06 Su(z)12 FBtr0074916 19918240 19919365 3L - 19919123 19919196 3'utr Su(z)12 FlyBase G38494.2 CAACCGCAACAAAAGCAATAACCATTCACTGCCAGCAACCAGTAACAACGCCAGTAGCAGCAGCAGCAACAGCA 173 19919172 0.999927653 5 171 540 0.979695431 1.586587305 0.020304569 0.10982659 0.218274112 173 0 4 193 3L:19919123-19919196 8 Su(z)12 FBtr0074916 19918240 19919365 CACTGCCA 8mer-A1 dme-miR-34-5p 3L - 19919122 19919195 3'utr Su(z)12 FlyBase G29082.1 AACCGCAACAAAAGCAATAACCATTCACTGCCAGCAACCAGTAACAACGCCAGTAGCAGCAGCAGCAACAGCAA 80 19919172 0.907329834 3 78 240 0.936507937 2.071882007 0 0.3375 0.579365079 80 8 0 118 3L:19919122-19919195 8 123 2029 FBgn0020887 388.31 12.01333333 18.55333333 0.31675723 10.23862375 6.629536471 2 2 2 0.15 dme-miR-965-3p 7mer-m8 TACGCTT 3L 19932238 19932244 + 3L_19932238_19932244_+ 0.620204701 0.620204847 0.620204774 7.07E-08 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 3L + 19932217 19932276 3'utr RhoGDI FlyBase G31574.1 CACAACTTACAACATACATCATACGCTTTTTGTTTTCCCTCAAACATGCCTTGTAAATGA 53 19932238 0.839527775 8 49 492 0.9375 1.176091259 0.125 0.20754717 0.34375 53 1 3 60 3L:19932217-19932276 7 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 TACGCTT 7mer-m8 dme-miR-965-3p 3L + 19932211 19932272 3'utr RhoGDI FlyBase G23873.1 ACGACACACAACTTACAACATACATCATACGCTTTTTGTTTTCCCTCAAACATGCCTTGTAA 49 19932245 0.923595682 7 42 441 0.882352941 1.77815125 0.235294118 0.367346939 0.544117647 49 8 0 60 3L:19932211-19932272 7 47.5 2030 FBgn0036921 5639.993333 451.2133333 691.66 0.008421996 0.105271712 0.068675361 0 -7 -3.5 0.15 dme-miR-8-3p 6mer2-7 AGTATT 3L 19932334 19932339 + 3L_19932334_19932339_+ 0.875677251 0.881274517 0.878475884 0.003957818 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 3L + 19932294 19932352 3'utr RhoGDI FlyBase G31575.1 AAGTGTAAGCGAATTTTTCCAAAAGTGTAATTGATCGTCAAGTATTTTTGTTAACGGTA 20 19932325 0.977382938 6 20 132 1 1.322219295 0.523809524 0.05 0.095238095 20 0 0 21 3L:19932294-19932352 6 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 AGTATT 6mer2-7 dme-miR-8-3p 3L + 19932290 19932356 3'utr RhoGDI FlyBase G23874.1 CCAAAAGTGTAAGCGAATTTTTCCAAAAGTGTAATTGATCGTCAAGTATTTTTGTTAACGGTATTAA 20 19932325 0.981392546 6 20 148 1 1.462397998 0.517241379 0.35 0.551724138 20 0 0 29 3L:19932290-19932356 6 17.5 2031 FBgn0036921 5639.993333 451.2133333 691.66 0.003102841 0.038784315 0.025301449 9 9 9 0.15 dme-miR-263a-5p 7mer-m1 TGCCATT 3L 19932569 19932575 + 3L_19932569_19932575_+ 0.765568588 0.765508556 0.765538572 4.24E-05 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 3L + 19932425 19932592 3'utr RhoGDI FlyBase G31576.2 AATTGGAATGTGTGCAGATGAAGAGCATTTTTCGCCTAAGTCCTCCTCAATGAGAGTCAAGTCAAAACCAAGTCAAGTCACTAGGCCAGTCAGTCAGTCAGTCAGCCAACCAGTCAGTCAGACAGTCAGTCGTTTGGTTCTTAATGCCATTGCCTATGTTTAACATAC 52 19932569 0.873984594 18 48 345 0.967741935 1.77815125 0.129032258 0.173076923 0.306451613 52 2 0 60 3L:19932425-19932592 7 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 TGCCATT 7mer-m1 dme-miR-263a-5p 3L + 19932387 19932594 3'utr RhoGDI FlyBase G23875.1 TGTAAAGCCATGATAAGTATTTTTGATACCCTATTTGCAATTGGAATGTGTGCAGATGAAGAGCATTTTTCGCCTAAGTCCTCCTCAATGAGAGTCAAGTCAAAACCAAGTCAAGTCACTAGGCCAGTCAGTCAGTCAGTCAGCCAACCAGTCAGTCAGACAGTCAGTCGTTTGGTTCTTAATGCCATTGCCTATGTTTAACATACAT 46 19932569 0.98282691 21 43 325 0.971830986 1.537819095 0.14084507 0.347826087 0.577464789 46 1 1 69 3L:19932387-19932594 7 13.5 2032 FBgn0036921 5639.993333 451.2133333 691.66 0.00239362 0.029919329 0.01951826 0 0 0 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 3L 19932641 19932647 + 3L_19932641_19932647_+ 0.610028236 0.560890299 0.585459267 0.034745742 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 3L + 19932629 19932659 3'utr RhoGDI FlyBase G31577.1 AAGAAAGTTGTTTGCATTTCGCTGTGTATTT 8 19932643 0.620224681 2 8 74 1 1 0.6 0.25 0.4 8 0 0 10 3L:19932629-19932659 7 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 TGCATTT 7mer-m8 dme-miR-277-3p 3L + 19932629 19932658 3'utr RhoGDI FlyBase G23876.1 AAGAAAGTTGTTTGCATTTCGCTGTGTATT 8 19932646 0.66493294 4 8 78 1 1.146128036 0.285714286 0.625 0.785714286 8 0 0 14 3L:19932629-19932658 7 8 2033 FBgn0036921 5639.993333 451.2133333 691.66 0.001418441 0.017729973 0.011566377 -2 -5 -3.5 0.15 dme-miR-33-5p 7mer-A1 AATGCAA 3L 19932884 19932890 + 3L_19932884_19932890_+ 0.782233794 0.782737538 0.782485666 0.00035617 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 3L + 19932817 19932902 3'utr RhoGDI FlyBase G31579.1 ATTATTCTAACTATATATCTCTGTGTATTTTTTGTGTACAACATACCATATATGCGAAAGCTGATTGAATGCAACCGAAGAGCAAT 35 19932882 0.957582578 5 34 169 0.973684211 1.568201724 0.210526316 0.057142857 0.131578947 35 1 0 37 3L:19932817-19932902 7 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 AATGCAA 7mer-A1 dme-miR-33-5p 3L + 19932856 19932905 3'utr RhoGDI FlyBase G23877.1 AACATACCATATATGCGAAAGCTGATTGAATGCAACCGAAGAGCAATAAA 35 19932882 0.663941034 6 33 139 0.983050847 1.763427994 0.152542373 0.5 0.711864407 34 1 0 58 3L:19932856-19932905 7 31.5 2034 FBgn0036921 5639.993333 451.2133333 691.66 0.005585113 0.069811767 0.045542608 2 2 2 0.15 dme-miR-1007-3p 6mer3-8 TGAGCT 3L 19979008 19979013 - 3L_19979008_19979013_- 0.979501364 0.927928882 0.953715123 0.036467264 CG14182 FBtr0074913|FBtr0346534|FBtr0331802 19978811|19978711|19978811 19979187|19979187|19979187 3L - 19978874 19979058 3'utr CG14182 FlyBase G38509.1 AGTTAACATATTTAAATTAGGTTAAATAAGCTGAAAACTCGAATATGAGCTACACGAATCTCTCATGCACTTGATACATTTTAAAAATTATTTACTTTTAAACCTGATTTTATTTTAATTGATAAATTTAGTTGATAAATGTTTAGTAAGCCAGACTTGATCATATCTAAGGAATAAGCGTAGCC 59 19978993 0.98098522 17 54 398 0.907692308 1.469822016 0.184615385 0.084745763 0.169230769 59 5 1 59 3L:19978874-19979058 6 CG14182 FBtr0331802|FBtr0346534|FBtr0074913 19978811|19978711|19978811 19979187|19979187|19979187 TGAGCT 6mer3-8 dme-miR-1007-3p 3L - 19978948 19979072 3'utr CG14182 FlyBase G29093.1 AAACACTCTATCTTAGTTAACATATTTAAATTAGGTTAAATAAGCTGAAAACTCGAATATGAGCTACACGAATCTCTCATGCACTTGATACATTTTAAAAATTATTTACTTTTAAACCTGATTTT 26 19978994 0.752567745 13 23 177 0.911764706 1.190331698 0.088235294 0.269230769 0.441176471 26 2 1 31 3L:19978948-19979072 6 15 2035 FBgn0036922 39 5.416666667 8.226666667 0.384615385 2.769230769 1.823338736 -20 -19 -19.5 0.15 dme-miR-308-3p 8mer-m1 CTGTGATT 3L 19979131 19979138 - 3L_19979131_19979138_- 0.38556064 0.385560638 0.385560639 0 CG14182 FBtr0074913|FBtr0346534|FBtr0331802 19978811|19978711|19978811 19979187|19979187|19979187 3L - 19979117 19979187 NoAnnotation G38510.1 AGACGTGACCACGGCATCGCTAGATTCCTCATTTCATTTGCAGTTTGCTCTGTGATTTGTTACATCTTTTG 131 19979139 0.810863064 16 124 1446 0.961783439 1.480006943 0.133757962 0.183206107 0.318471338 131 2 4 151 3L:19979117-19979187 8 CG14182 FBtr0331802|FBtr0346534|FBtr0074913 19978811|19978711|19978811 19979187|19979187|19979187 CTGTGATT 8mer-m1 dme-miR-308-3p 3L - 19979117 19979189 stop_codon CG14182 FlyBase G29094.1 AAAGACGTGACCACGGCATCGCTAGATTCCTCATTTCATTTGCAGTTTGCTCTGTGATTTGTTACATCTTTTG 86 19979131 0.992770266 12 80 925 0.946969697 2.096910013 0.075757576 0.465116279 0.651515152 86 7 0 125 3L:19979117-19979189 8 103.5 2036 FBgn0036922 39 5.416666667 8.226666667 2.653846154 19.10769231 12.58103728 1 -7 -3 0.15 dme-miR-282-5p 6mer2-7 GAGGCT 3L 20150143 20150148 - 3L_20150143_20150148_- 0.992100608 0.999802543 0.995951575 0.005446066 CG42674 FBtr0302712|FBtr0302713|FBtr0302715|FBtr0302714|FBtr0332699|FBtr0302716|FBtr0332698 20149612|20149612|20149612|20149612|20149612|20149612|20149612 20151571|20151571|20151571|20151571|20151571|20151571|20151571 3L - 20150108 20150172 3'utr CG42674 FlyBase G38525.1 TGATTTAAGGGACTACACCACAGTGAGGCTTTGGATTTGGCCAAACGATTTGTACATATTACCCC 63 20150149 0.965852218 5 61 327 0.971014493 1.826074803 0.333333333 0.079365079 0.15942029 63 2 0 67 3L:20150108-20150172 6 CG42674 FBtr0302714|FBtr0302715|FBtr0302713|FBtr0302712|FBtr0332698|FBtr0302716|FBtr0332699 20149612|20149612|20149612|20149612|20149612|20149612|20149612 20151571|20151571|20151571|20151571|20151571|20151571|20151571 GAGGCT 6mer2-7 dme-miR-282-5p 3L - 20150130 20150173 3'utr CG42674 FlyBase G29101.1 TTGATTTAAGGGACTACACCACAGTGAGGCTTTGGATTTGGCCA 41 20150149 0.925082029 2 40 195 0.985714286 1.838849091 0.2 0.487804878 0.7 41 1 0 69 3L:20150130-20150173 6 51 2037 FBgn0261556 3405.386667 53.14 81.81333333 0.014976273 0.959729018 0.623370274 1 1 1 0.15 dme-miR-8-3p 7mer-A1 AGTATTA 3L 20150610 20150616 - 3L_20150610_20150616_- 0.823236139 0.823342526 0.823289333 7.52E-05 CG42674 FBtr0302712|FBtr0302713|FBtr0302715|FBtr0302714|FBtr0332699|FBtr0302716|FBtr0332698 20149612|20149612|20149612|20149612|20149612|20149612|20149612 20151571|20151571|20151571|20151571|20151571|20151571|20151571 3L - 20150593 20150642 3'utr CG42674 FlyBase G38527.1 ACGAAAAAGTTTGTATACCAATATAGAGTATTAGCCGATCTTCGGTCAAA 50 20150620 0.86578485 7 40 408 0.806451613 1.397940009 0.258064516 0.18 0.338709677 50 11 1 50 3L:20150593-20150642 7 CG42674 FBtr0302714|FBtr0302715|FBtr0302713|FBtr0302712|FBtr0332698|FBtr0302716|FBtr0332699 20149612|20149612|20149612|20149612|20149612|20149612|20149612 20151571|20151571|20151571|20151571|20151571|20151571|20151571 AGTATTA 7mer-A1 dme-miR-8-3p 3L - 20150595 20150635 3'utr CG42674 FlyBase G29102.2 AGTTTGTATACCAATATAGAGTATTAGCCGATCTTCGGTCA 37 20150620 0.893453878 5 21 265 0.633333333 1.278753601 0.2 0.405405405 0.633333333 37 21 1 38 3L:20150595-20150635 7 42.5 2038 FBgn0261556 3405.386667 53.14 81.81333333 0.012480227 0.799774181 0.519475228 4 4 4 0.15 dme-miR-184-3p 6mer3-8 TCCGTC 3L 20151515 20151520 - 3L_20151515_20151520_- 0.997402173 0.941202372 0.969302272 0.03973926 CG42674 FBtr0302712|FBtr0302713|FBtr0302715|FBtr0302714|FBtr0332699|FBtr0302716|FBtr0332698 20149612|20149612|20149612|20149612|20149612|20149612|20149612 20151571|20151571|20151571|20151571|20151571|20151571|20151571 3L - 20151494 20151533 3'utr CG42674 FlyBase G38533.1 ACTTAGCCATAGATCCGTCACAAACTACCAGGATAAACTA 14 20151520 0.734943943 3 13 53 0.941176471 1.204119983 0 0.142857143 0.294117647 14 1 0 16 3L:20151494-20151533 6 CG42674 FBtr0302714|FBtr0302715|FBtr0302713|FBtr0302712|FBtr0332698|FBtr0302716|FBtr0332699 20149612|20149612|20149612|20149612|20149612|20149612|20149612 20151571|20151571|20151571|20151571|20151571|20151571|20151571 TCCGTC 6mer3-8 dme-miR-184-3p 3L - 20151488 20151533 3'utr CG42674 FlyBase G29105.1 ACTTAGCCATAGATCCGTCACAAACTACCAGGATAAACTACACGTA 8 20151520 0.948642068 3 8 32 1 1.230448921 0 0.625 0.823529412 8 0 0 17 3L:20151488-20151533 6 10.5 2039 FBgn0261556 3405.386667 53.14 81.81333333 0.00308335 0.197591268 0.128340939 0 0 0 0.15 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3L 20268977 20268984 - 3L_20268977_20268984_- 0.627152463 0.616762458 0.621957461 0.007346839 gogo FBtr0074848 20268857 20269444 3L - 20268960 20269031 3'utr gogo FlyBase G38601.1 ATGAAATTTTGTGATCTTCATTTTGTGCTTGTAAGCATTGGAAAAATTCTAGTCAATACATTAGTCAAAATT 36 20268985 0.840256325 7 35 276 0.976744186 1.322219295 0.139534884 0.138888889 0.279069767 36 0 1 42 3L:20268960-20269031 8 gogo FBtr0074848 20268857 20269444 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L - 20268953 20269001 3'utr gogo FlyBase G29151.1 GTAAGCATTGGAAAAATTCTAGTCAATACATTAGTCAAAATTAATTAGC 19 20268985 0.974340804 3 19 128 1 1.491361694 0.096774194 0.473684211 0.677419355 19 0 0 31 3L:20268953-20269001 8 22.5 2040 FBgn0052227 17 0.396666667 0.6 1.323529412 56.72268908 37.5 1 1 1 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3L 20297348 20297353 - 3L_20297348_20297353_- 0.942410372 0.968345082 0.955377727 0.018338602 Pex23 FBtr0074846 20297127 20297459 3L - 20297298 20297421 3'utr Pex23 FlyBase G38605.1 ACGGACGATCCTGTTTGTTGTATTTATTCATATTTACAAGCTTATATGTGACCATGCCAACGCTTTTTCCAAAGTATATGAAAATAAGATGTTTCCTATTTAAGCTATTTGAAACGTATTATTT 62 20297355 0.985104955 14 59 476 0.960526316 1.562292864 0.184210526 0.177419355 0.328947368 62 2 1 73 3L:20297298-20297421 6 Pex23 FBtr0074846 20297127 20297459 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 20297320 20297391 3'utr Pex23 FlyBase G29154.1 TATTTACAAGCTTATATGTGACCATGCCAACGCTTTTTCCAAAGTATATGAAAATAAGATGTTTCCTATTTA 36 20297378 0.980915157 14 32 231 0.842105263 1.681241237 0.105263158 0.444444444 0.649122807 36 9 0 48 3L:20297320-20297391 6 15.5 2041 FBgn0052226 261.2133333 7.016666667 10.72666667 0.059338472 2.209026128 1.444996892 2 25 13.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3L 20308852 20308857 + 3L_20308852_20308857_+ 0.999999645 1 0.999999822 2.83E-07 CG6597 FBtr0074837|FBtr0332775|FBtr0074838|FBtr0344228 20308825|20308825|20308825|20308825 20309194|20309511|20309511|20309194 3L + 20308802 20308927 stop_codon CG6597 FlyBase G31674.2 CACCTCCACAACCGGATCTAGCTGAGAAAAGCTGTATCGAGTCGCCTATTTCTAGTTCAACTTTGGGAGCTCAGTGCGGAGAGGAGTTCGCGGAGACTGAGTCGGAGATGGGATGCGATGCGATGG 27 20308852 0.979593359 12 25 167 0.96875 1.491361694 0.4375 0.111111111 0.25 27 1 0 31 3L:20308802-20308927 6 CG6597 FBtr0074838|FBtr0344228|FBtr0074837|FBtr0332775 20308825|20308825|20308825|20308825 20309511|20309194|20309194|20309511 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 20308839 20308909 5'utr CG6597 FlyBase G23948.1 CGAGTCGCCTATTTCTAGTTCAACTTTGGGAGCTCAGTGCGGAGAGGAGTTCGCGGAGACTGAGTCGGAGA 15 20308852 0.984716353 6 13 104 0.92 1.361727836 0.2 0.466666667 0.68 15 2 0 23 3L:20308839-20308909 6 12.5 2042 FBgn0036967 626.6566667 51.31333333 78.75333333 0.019947127 0.243601403 0.15872344 0 0 0 0.15 dme-miR-277-3p 6mer3-8 TGCATT 3L 20315663 20315668 + 3L_20315663_20315668_+ 0.882117319 0.996125142 0.939121231 0.080615688 alphaSnap FBtr0074840 20315546 20316577 3L + 20315659 20315690 3'utr alphaSnap FlyBase G31702.1 GTGTTGCATTGCTTAACCTGAAAGCACCCAAA 5 20315669 0.96623756 3 4 27 0.8 0.602059991 0.2 0 0 5 1 0 4 3L:20315659-20315690 6 alphaSnap FBtr0074840 20315546 20316577 TGCATT 6mer3-8 dme-miR-277-3p 3L + 20315656 20315692 3'utr alphaSnap FlyBase G23972.1 AACGTGTTGCATTGCTTAACCTGAAAGCACCCAAACG 5 20315670 0.979214049 3 5 35 1 0.954242509 0.111111111 0.4 0.666666667 5 0 0 9 3L:20315656-20315692 6 4.5 2043 FBgn0250791 959.9966667 56.11333333 85.60666667 0.004687516 0.080194844 0.052566 -6 -7 -6.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 20382257 20382262 + 3L_20382257_20382262_+ 0.999598773 0.999999993 0.999799383 0.000283691 RhoBTB FBtr0078185|FBtr0330157|FBtr0330158 20381697|20381881|20381697 20382398|20382398|20382398 3L + 20382186 20382292 3'utr RhoBTB FlyBase G31744.2 TTGTTCTGCACGATCCCTCCCATGGAATGTGGACAGCCGAAGGACGCAGACATGTGTATATCCATATATTTGTACCTTTACCTAAGACATGTATGTATGTATATTTT 19 20382265 0.893786405 13 18 165 0.954545455 1.021189299 0.181818182 0.157894737 0.272727273 19 0 1 21 3L:20382186-20382292 6 RhoBTB FBtr0330158|FBtr0078185|FBtr0330157 20381697|20381697|20381881 20382398|20382398|20382398 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 20382247 20382284 3'utr RhoBTB FlyBase G24002.1 CCATATATTTGTACCTTTACCTAAGACATGTATGTATG 10 20382263 0.601295405 4 8 89 0.857142857 0.77815125 0.571428571 0.4 0.571428571 10 1 1 12 3L:20382247-20382284 6 10 2044 FBgn0036980 400.9966667 15.65333333 23.82333333 0.024937863 0.638841567 0.419756541 -8 -6 -7 0.15 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 20391198 20391203 + 3L_20391198_20391203_+ 0.97338398 0.968227681 0.97080583 0.003646055 fbl FBtr0307392|FBtr0078189|FBtr0307393|FBtr0078186|FBtr0078190|FBtr0078187|FBtr0078188 20391181|20391181|20391181|20391181|20391181|20391181|20391181 20391454|20391913|20391913|20391454|20391454|20391913|20391454 3L + 20391166 20391225 stop_codon fbl FlyBase G31756.1 AACACTCCACTAGATAGTCGCTATAACCACATGTTCCTCCCAAGGGCACCCAACGTGCGC 105 20391197 0.78491325 4 105 522 1 2.06069784 0.060869565 0.095238095 0.173913043 105 0 0 115 3L:20391166-20391225 6 fbl FBtr0078187|FBtr0078188|FBtr0078190|FBtr0307393|FBtr0078186|FBtr0307392|FBtr0078189 20391181|20391181|20391181|20391181|20391181|20391181|20391181 20391913|20391454|20391454|20391913|20391454|20391454|20391913 GTTCCT 6mer2-7 dme-miR-276a-3p 3L + 20391167 20391229 stop_codon fbl FlyBase G24012.1 ACACTCCACTAGATAGTCGCTATAACCACATGTTCCTCCCAAGGGCACCCAACGTGCGCCAGC 58 20391197 0.919911695 3 58 296 1 1.963787827 0.054347826 0.379310345 0.608695652 58 0 0 92 3L:20391167-20391229 6 80.5 2045 FBgn0011205 689.3733333 36.86333333 56.25 0.116772721 2.183741749 1.431111111 1 1 1 0.15 dme-miR-968-5p 7mer-A1 CTACTTA 3L 20391837 20391843 + 3L_20391837_20391843_+ 0.814043621 0.813993299 0.81401846 3.56E-05 fbl FBtr0078189|FBtr0307393|FBtr0078187 20391181|20391181|20391181 20391913|20391913|20391913 3L + 20391786 20391914 3'utr fbl FlyBase G31761.1 TGATGATACAGTTTAAAAACAAGACGGTAATAGCCTTCTCTCTACCTTTGCCTACTTATACAATTATTGTTAAGGTTTGTGTTATTCTAAAAAAATTCCGTAATAAACTAGACACGAGTTGTTCTGATA 32 20391834 0.987834736 12 29 259 0.911111111 1.135662602 0.155555556 0.28125 0.488888889 32 2 2 41 3L:20391786-20391914 7 fbl FBtr0078187|FBtr0307393|FBtr0078189 20391181|20391181|20391181 20391913|20391913|20391913 CTACTTA 7mer-A1 dme-miR-968-5p 3L + 20391797 20391839 3'utr fbl FlyBase G24017.1 TTTAAAAACAAGACGGTAATAGCCTTCTCTCTACCTTTGCCTA 12 20391834 0.986940158 2 11 97 0.941176471 0.903089987 0.058823529 0.25 0.470588235 12 0 1 16 3L:20391797-20391839 3 12.5 2046 FBgn0011205 689.3733333 36.86333333 56.25 0.01813241 0.339090334 0.222222222 3 3 3 0.15 dme-miR-1008-3p 7mer-A1 GCTGTGA 3L 20428169 20428175 - 3L_20428169_20428175_- 0.81578468 0.822201422 0.818993051 0.004537292 CG5262 FBtr0078230|FBtr0310615 20428098|20427960 20428352|20428352 3L - 20428141 20428206 3'utr CG5262 FlyBase G38672.1 ATTTTAGCAACGTAAGTCAGTATTGAAATCGGCTGTGACACAAATTTTCAATATATTTTTTATATA 101 20428184 0.969421902 9 92 650 0.920353982 1.539912085 0.10619469 0.118811881 0.212389381 101 7 2 104 3L:20428141-20428206 7 CG5262 FBtr0078230|FBtr0310615 20428098|20427960 20428352|20428352 GCTGTGA 7mer-A1 dme-miR-1008-3p 3L - 20428151 20428213 3'utr CG5262 FlyBase G29203.1 TAATCGAATTTTAGCAACGTAAGTCAGTATTGAAATCGGCTGTGACACAAATTTTCAATATAT 69 20428182 0.673608042 10 59 430 0.845360825 1.135662602 0.257731959 0.31884058 0.515463918 69 10 5 82 3L:20428151-20428213 7 77 2047 FBgn0036988 148.2966667 9.42 14.41 0.519229472 8.174097665 5.34351145 9 7 8 0.15 dme-miR-970-3p 6mer3-8 TCTTAT 3L 20428343 20428348 - 3L_20428343_20428348_- 0.999896264 0.999877807 0.999887035 1.31E-05 CG5262 FBtr0078230|FBtr0310615 20428098|20427960 20428352|20428352 3L - 20428326 20428354 stop_codon CG5262 FlyBase G38673.1 AAGTTATCTTATCTGCCAATGTGGAGATA 5 20428346 0.591025554 4 5 37 1 0.698970004 0 0 0 5 0 0 5 3L:20428326-20428354 6 CG5262 FBtr0078230|FBtr0310615 20428098|20427960 20428352|20428352 TCTTAT 6mer3-8 dme-miR-970-3p 3L - 20428329 20428354 stop_codon CG5262 FlyBase G29205.1 AAGTTATCTTATCTGCCAATGTGGAG 6 20428346 0.683066354 3 5 38 0.6 0.77815125 0 0.333333333 0.6 6 4 0 6 3L:20428329-20428354 6 5 2048 FBgn0036988 148.2966667 9.42 14.41 0.0337162 0.530785563 0.346981263 -2 -2 -2 0.15 dme-miR-252-5p 8mer-m1 GTACTTAG 3L 20450494 20450501 + 3L_20450494_20450501_+ 0.636283076 0.636787031 0.636535053 0.000356311 CG5910 FBtr0300411|FBtr0078195 20450395|20450395 20450580|20450580 3L + 20450459 20450521 3'utr CG5910 FlyBase G31807.1 AAGTAGGATCTAGTCGTAGTAGCATTCAAATAAGTGTACTTAGTTCAACAAATGTCCAGTGGT 7 20450498 0.897652122 5 6 40 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 3L:20450459-20450521 8 CG5910 FBtr0300411|FBtr0078195 20450395|20450395 20450580|20450580 GTACTTAG 8mer-m1 dme-miR-252-5p 3L + 20450455 20450514 3'utr CG5910 FlyBase G24046.1 AGAGAAGTAGGATCTAGTCGTAGTAGCATTCAAATAAGTGTACTTAGTTCAACAAATGTC 7 20450498 0.983702598 5 5 41 0.75 0.77815125 0.375 0.142857143 0.25 7 2 0 6 3L:20450455-20450514 8 3 2049 FBgn0036993 5.333333333 0.613333333 0.916666667 0.5625 4.891304348 3.272727273 -4 -4 -4 0.15 dme-miR-8-3p 6mer2-7 AGTATT 3L 20469711 20469716 - 3L_20469711_20469716_- 0.970932482 0.999597751 0.985265116 0.020269428 CG32428 FBtr0303381 20469672 20469796 3L - 20469700 20469747 3'utr CG32428 FlyBase G38694.1 AAGCTGTCGCAAACTAAAGGTGCTTACCAATAGTATTTGAGTTCGAAT 18 20469710 0.700257765 5 18 119 1 1.380211242 0.416666667 0.166666667 0.375 18 0 0 24 3L:20469700-20469747 6 CG32428 FBtr0303381 20469672 20469796 AGTATT 6mer2-7 dme-miR-8-3p 3L - 20469696 20469747 3'utr CG32428 FlyBase G29214.1 AAGCTGTCGCAAACTAAAGGTGCTTACCAATAGTATTTGAGTTCGAATAAAC 14 20469710 0.687443341 5 13 95 1 1.301029996 0.3 0.285714286 0.5 14 0 0 20 3L:20469696-20469747 6 11.5 2050 FBgn0052428 469.8933333 37.72333333 57.65 0.024473639 0.304851109 0.199479618 -6 -6 -6 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 20470525 20470532 - 3L_20470525_20470532_- 0.498997208 0.499157461 0.499077335 0.000113349 CG32428 FBtr0300452 20470021 20470894 3L - 20470514 20470556 3'utr CG32428 FlyBase G38700.1 TAAGTCGAACATCGAACATAAACTGTACTTAACTACCTAAAGA 170 20470533 0.821063557 3 170 1032 1 2.322219295 0.161904762 0.205882353 0.357142857 170 0 0 210 3L:20470514-20470556 8 CG32428 FBtr0300452 20470021 20470894 GTACTTAA 8mer-A1 dme-miR-252-5p 3L - 20470447 20470555 3'utr CG32428 FlyBase G29219.1 AAGTCGAACATCGAACATAAACTGTACTTAACTACCTAAAGAATTGAAATACGTAATTAATTTCAAAAAGTAATAGTTAGACCTGCGAAACATTGCAATCACAAAAAAG 141 20470533 0.97224245 7 141 838 1 2.274157849 0.143617021 0.29787234 0.473404255 141 0 0 188 3L:20470447-20470555 8 153.5 2051 FBgn0052428 469.8933333 37.72333333 57.65 0.326669883 4.069099585 2.662619254 1 1 1 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 20510939 20510944 + 3L_20510939_20510944_+ 0.957239283 0.998155693 0.977697488 0.028932264 CG32425 FBtr0113436|FBtr0078204 20510792|20510792 20511058|20511058 3L + 20510919 20510959 3'utr CG32425 FlyBase G31834.1 ACAACAAATGCTATACAAATACCAAATCTACACGAGCCGCC 16 20510938 0.940333725 2 14 66 0.888888889 1.204119983 0.055555556 0.125 0.222222222 16 2 0 16 3L:20510919-20510959 6 CG32425 FBtr0078204|FBtr0113436 20510792|20510792 20511058|20511058 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 20510891 20510983 3'utr CG32425 FlyBase G24063.1 ACAACTACCAATTCTACCACCAAGCAGAACAACAAATGCTATACAAATACCAAATCTACACGAGCCGCCCACAACCACGCCCACGCCTCCTGC 11 20510938 0.938303452 5 11 43 1 1.176091259 0 0.363636364 0.533333333 11 0 0 15 3L:20510891-20510983 6 11.5 2052 FBgn0052425 913.0466667 51.64333333 79.68666667 0.012595194 0.222681211 0.144315235 1 1 1 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 3L 20514032 20514037 + 3L_20514032_20514037_+ 0.904051451 0.992143799 0.948097625 0.062290663 CG32425 FBtr0078205|FBtr0078202|FBtr0078203 20513685|20513685|20513685 20514107|20514107|20514107 3L + 20514003 20514081 3'utr CG32425 FlyBase G31838.1 CCACACGGAATATGTATTAGTTTCGGAACTGTGTTAATCACCTAAGTATTTAGACACTATTACCTAATAAAACTTTAAA 26 20514035 0.976145597 10 21 220 0.8 1.079181246 0.033333333 0.153846154 0.266666667 26 5 1 24 3L:20514003-20514081 6 CG32425 FBtr0078202|FBtr0078205|FBtr0078203 20513685|20513685|20513685 20514107|20514107|20514107 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 20513997 20514045 3'utr CG32425 FlyBase G24070.1 CAGCAACCACACGGAATATGTATTAGTTTCGGAACTGTGTTAATCACCT 8 20514023 0.982026513 7 8 60 1 1.113943352 0 0.5 0.692307692 8 0 0 13 3L:20513997-20514045 6 12 2053 FBgn0052425 913.0466667 51.64333333 79.68666667 0.013142811 0.232363003 0.15058981 -3 9 3 0.15 dme-miR-980-3p 6mer3-8 GGCAGC 3L 20515006 20515011 - 3L_20515006_20515011_- 0.999981508 0.975861477 0.987921493 0.017055416 CG5059 FBtr0331567|FBtr0078217|FBtr0078219|FBtr0078218|FBtr0078216 20514596|20514597|20514596|20514596|20514597 20515331|20515331|20515331|20515331|20515331 3L - 20514965 20515038 3'utr CG5059 FlyBase G38709.1 AATTTTATATATTTAACATTATATCAAGGCAGCAAATCTAATGATACAGAAAAGCATTTATAGATGCTCCATAT 52 20514999 0.679503473 12 46 290 0.888888889 1.271066772 0 0.134615385 0.285714286 52 5 2 56 3L:20514965-20515038 6 CG5059 FBtr0078218|FBtr0078216|FBtr0078217|FBtr0078219|FBtr0331567 20514596|20514597|20514597|20514596|20514596 20515331|20515331|20515331|20515331|20515331 GGCAGC 6mer3-8 dme-miR-980-3p 3L - 20514967 20515036 3'utr CG5059 FlyBase G29226.1 TTTTATATATTTAACATTATATCAAGGCAGCAAATCTAATGATACAGAAAAGCATTTATAGATGCTCCAT 38 20514998 0.69539842 10 34 208 0.93442623 1.755874856 0 0.315789474 0.573770492 38 4 0 57 3L:20514967-20515036 6 38 2054 FBgn0037007 1992.566667 140.1466667 214.2533333 0.01907088 0.271144515 0.177360134 -12 -13 -12.5 0.15 dme-bantam-3p 8mer-A1 TGATCTCA 3L 20743899 20743906 + 3L_20743899_20743906_+ 0.631136385 0.631136385 0.631136385 0 CG13252 FBtr0078245 20743657 20744508 3L + 20743879 20743927 3'utr CG13252 FlyBase G31851.1 TGCCTTTATTTGTTTGGTATTGATCTCATTTAAACTTTTCACTCTTCAC 98 20743898 0.623514127 15 96 1093 0.983870968 1.785329835 0 0.214285714 0.379032258 98 1 1 122 3L:20743879-20743927 8 CG13252 FBtr0078245 20743657 20744508 TGATCTCA 8mer-A1 dme-bantam-3p 3L + 20743882 20743917 3'utr CG13252 FlyBase G24078.1 CTTTATTTGTTTGGTATTGATCTCATTTAAACTTTT 68 20743898 0.624469351 9 65 742 0.96875 1.491361694 0 0.294117647 0.5 68 1 2 93 3L:20743882-20743917 8 82.5 2055 FBgn0037016 248.3333333 12.01 18.50666667 0.332214765 6.869275604 4.457853026 1 1 1 0.15 dme-miR-283-5p 6mer3-8 TGATAT 3L 20744258 20744263 + 3L_20744258_20744263_+ 0.589695452 0.456317095 0.523006273 0.094312771 CG13252 FBtr0078245 20743657 20744508 3L + 20744203 20744277 3'utr CG13252 FlyBase G31853.1 AACTAATCGAGACACGTCTTAGATTTTAGTGTTAGCTTCTAATTTAGGAAGTATGTGATATATATGCTAATTAGC 17 20744265 0.988732764 9 17 161 1 1.255272505 0.166666667 0.058823529 0.111111111 17 0 0 18 3L:20744203-20744277 6 CG13252 FBtr0078245 20743657 20744508 TGATAT 6mer3-8 dme-miR-283-5p 3L + 20744216 20744296 3'utr CG13252 FlyBase G24081.1 ACGTCTTAGATTTTAGTGTTAGCTTCTAATTTAGGAAGTATGTGATATATATGCTAATTAGCCTATGTAATTTGTCAACCA 23 20744254 0.990359796 11 21 216 0.971428571 1.531478917 0 0.434782609 0.628571429 23 1 0 34 3L:20744216-20744296 6 12 2056 FBgn0037016 248.3333333 12.01 18.50666667 0.048322148 0.999167361 0.648414986 -7 4 -1.5 0.15 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 20768379 20768386 - 3L_20768379_20768386_- 0.668669034 0.668685781 0.668677407 1.19E-05 CG4074 FBtr0345811|FBtr0078280 20768205|20768340 20768406|20768406 3L - 20768362 20768405 3'utr CG4074 FlyBase G38739.1 CAAATAAACTTTCCAATATGGCAGCTATTTTATGAACATAAAAG 51 20768388 0.872123206 5 51 442 1 1.799340549 0 0.137254902 0.301587302 51 0 0 63 3L:20768362-20768405 8 CG4074 FBtr0345811|FBtr0078280 20768205|20768340 20768406|20768406 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L - 20768360 20768404 3'utr CG4074 FlyBase G29248.1 AAATAAACTTTCCAATATGGCAGCTATTTTATGAACATAAAAGTT 28 20768387 0.979479987 4 25 256 0.888888889 1.204119983 0 0.285714286 0.444444444 28 3 1 32 3L:20768360-20768404 8 39.5 2057 FBgn0037017 21.33333333 2.336666667 3.576666667 1.8515625 16.90442225 11.04380242 2 1 1.5 0.15 dme-miR-14-3p 6mer3-8 AAGACT 3L 20780187 20780192 + 3L_20780187_20780192_+ 0.944017354 0.965578989 0.954798171 0.015246354 Pex14 FBtr0078251 20780105 20780378 3L + 20780154 20780321 3'utr Pex14 FlyBase G31876.1 GCTGTAAATTGAGTTTCCCCGTTAAATGCCTTCAAGACTTTTGGTTTTTTTTCTTTGCGTTTATAGCATTTAAGGTTTCTTTATAGTCAACAGCTAATCCATATCCAAAAGTACATACACACACTCACATATACACACTTATGCGATACGATGTCTATACAATGTAAT 55 20780208 0.991396945 15 53 567 0.938461538 1.785329835 0.338461538 0.145454545 0.276923077 55 4 0 61 3L:20780154-20780321 6 Pex14 FBtr0078251 20780105 20780378 AAGACT 6mer3-8 dme-miR-14-3p 3L + 20780174 20780248 3'utr Pex14 FlyBase G24093.1 GTTAAATGCCTTCAAGACTTTTGGTTTTTTTTCTTTGCGTTTATAGCATTTAAGGTTTCTTTATAGTCAACAGCT 31 20780194 0.754003682 9 31 323 1 1.662757832 0.369565217 0.35483871 0.565217391 31 0 0 46 3L:20780174-20780248 6 15.5 2058 FBgn0037020 373.37 37.02333333 56.88333333 0.04151378 0.418654902 0.272487548 -21 -7 -14 0.15 dme-miR-33-5p 6mer2-7 AATGCA 3L 20780944 20780949 - 3L_20780944_20780949_- 0.994932951 0.993929169 0.99443106 0.000709794 CG11399 FBtr0078277 20780348 20781657 3L - 20780872 20781044 3'utr CG11399 FlyBase G38750.2 GAAATAGCTGATAAAAATGCCGGCCTGGCCGCTGTTTATCTTATACGATTGTACCCAACAAACAAGGGCCAAGCTACCCAACAAAAGACTCTAATAATGCATACATAGTATGGGTAGGGGTACTGTTCTCTATCCTTGTTTCAGGGTATTTCGCAATGGTTTGTCCATTCACA 46 20780952 0.963992638 14 44 213 0.962264151 1.707570176 0.169811321 0.130434783 0.245283019 46 2 0 51 3L:20780872-20781044 6 CG11399 FBtr0078277 20780348 20781657 AATGCA 6mer2-7 dme-miR-33-5p 3L - 20780940 20781000 3'utr CG11399 FlyBase G29255.1 ACGATTGTACCCAACAAACAAGGGCCAAGCTACCCAACAAAAGACTCTAATAATGCATACA 18 20780952 0.913435509 5 18 59 1 1.531478917 0.147058824 0.444444444 0.705882353 18 0 0 34 3L:20780940-20781000 6 10 2059 FBgn0037021 631 17.94666667 27.51333333 0.015847861 0.557206538 0.363460141 3 3 3 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT 3L 20781099 20781105 - 3L_20781099_20781105_- 0.658890063 0.658751115 0.658820589 9.83E-05 CG11399 FBtr0078277 20780348 20781657 3L - 20781061 20781162 3'utr CG11399 FlyBase G38751.1 ATTTTTGTACTTCTTGTCAAAGCTTTAATTTTCAAACGTACACAGTGCTCGGCCTTTGGCAGCTGGTATTGCCCCCATCGCAAGGTATAATTAATTGTAAAT 138 20781106 0.771048009 16 137 943 0.993975904 2.217483944 0.186746988 0.173913043 0.313253012 138 1 0 165 3L:20781061-20781162 7 CG11399 FBtr0078277 20780348 20781657 GGCAGCT 7mer-m8 dme-miR-980-3p 3L - 20781061 20781126 3'utr CG11399 FlyBase G29256.1 CGTACACAGTGCTCGGCCTTTGGCAGCTGGTATTGCCCCCATCGCAAGGTATAATTAATTGTAAAT 102 20781106 0.773926277 7 102 651 1 2.204119983 0.2625 0.352941176 0.5875 102 0 0 160 3L:20781061-20781126 7 110 2060 FBgn0037021 631 17.94666667 27.51333333 0.174326466 6.129271917 3.998061546 1 1 1 0.15 dme-miR-970-3p 6mer3-8 TCTTAT 3L 20839152 20839157 - 3L_20839152_20839157_- 0.999999878 0.999436026 0.999717952 0.000398738 CSN3 FBtr0078269 20839094 20839324 3L - 20839123 20839182 3'utr CSN3 FlyBase G38790.1 CAGCTACCACAACAACAAACTGCGCTCTTATTGCAAATTTAAAGATGAACATGCTATTTT 12 20839155 0.97654121 4 12 78 1 1.176091259 0 0.166666667 0.333333333 12 0 0 15 3L:20839123-20839182 6 CSN3 FBtr0078269 20839094 20839324 TCTTAT 6mer3-8 dme-miR-970-3p 3L - 20839119 20839174 3'utr CSN3 FlyBase G29289.1 ACAACAACAAACTGCGCTCTTATTGCAAATTTAAAGATGAACATGCTATTTTAAAT 9 20839155 0.976491235 4 9 59 1 1.079181246 0 0.222222222 0.416666667 9 0 0 12 3L:20839119-20839174 6 9.5 2061 FBgn0027055 526.47 38.38666667 58.78666667 0.018044713 0.247481765 0.16160127 -2 -2 -2 0.15 dme-miR-31a-5p 6mer3-8 TCTTGC 3L 20839197 20839202 - 3L_20839197_20839202_- 0.999999617 0.999999892 0.999999755 2.12E-07 CSN3 FBtr0078269 20839094 20839324 3L - 20839187 20839266 3'utr CSN3 FlyBase G38791.1 ATCCCCAACACCGTTTACCAGAACTTGTCGAAGCCGCGAGGCCCTGGGCCCGAAAGCTGACGTCTCTTGCAGTCCGTACT 8 20839200 0.964220181 6 8 42 1 0.903089987 0 0 0 8 0 0 8 3L:20839187-20839266 6 CSN3 FBtr0078269 20839094 20839324 TCTTGC 6mer3-8 dme-miR-31a-5p 3L - 20839185 20839237 3'utr CSN3 FlyBase G29290.1 GAAGCCGCGAGGCCCTGGGCCCGAAAGCTGACGTCTCTTGCAGTCCGTACTCA 6 20839209 0.914893565 3 5 19 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 3L:20839185-20839237 6 4 2062 FBgn0027055 526.47 38.38666667 58.78666667 0.007597774 0.104202848 0.06804264 -2 7 2.5 0.15 dme-miR-305-3p 6mer3-8 ATGTGC 3L 20926200 20926205 - 3L_20926200_20926205_- 0.888430919 0.957728528 0.923079724 0.049000803 fng FBtr0078267 20925889 20926399 3L - 20926180 20926226 3'utr fng FlyBase G38802.1 ATGTAGCAATACGCTGGACAGATGTGCTTCCTAATGGTATAAGTAAT 25 20926204 0.880622983 3 25 169 1 1.447158031 0.214285714 0.12 0.214285714 25 0 0 28 3L:20926180-20926226 6 fng FBtr0078267 20925889 20926399 ATGTGC 6mer3-8 dme-miR-305-3p 3L - 20926182 20926226 3'utr fng FlyBase G29296.1 ATGTAGCAATACGCTGGACAGATGTGCTTCCTAATGGTATAAGTA 20 20926204 0.828915419 4 20 120 1 1.447158031 0.178571429 0.4 0.571428571 20 0 0 28 3L:20926182-20926226 6 21.5 2063 FBgn0011591 7.356666667 0.46 0.71 2.922519257 46.73913043 30.28169014 -1 -1 -1 0.15 dme-miR-308-3p 8mer-m1 CTGTGATT 3L 20926278 20926285 - 3L_20926278_20926285_- 0.359739586 0.360293881 0.360016734 0.000391949 fng FBtr0078267 20925889 20926399 3L - 20926265 20926302 3'utr fng FlyBase G38803.1 AAAATCAAATCTCGCCACTGTGATTTAACATTAAGTTT 62 20926278 0.732766937 6 58 473 0.947368421 1.556302501 0.013157895 0.161290323 0.315789474 62 3 1 72 3L:20926265-20926302 8 fng FBtr0078267 20925889 20926399 CTGTGATT 8mer-m1 dme-miR-308-3p 3L - 20926264 20926380 3'utr fng FlyBase G29297.1 AGGTCCCTGGGGATCCTATTTGGCTGTTGCAGGCGCACGTCTGCACTGGGTCGGTTGTGAACCGCTGGGGCAGGCGTCAAAATCAAATCTCGCCACTGTGATTTAACATTAAGTTTA 68 20926278 0.984855607 12 62 501 0.932038835 1.681241237 0.116504854 0.382352941 0.59223301 68 6 1 96 3L:20926264-20926380 8 56 2064 FBgn0011591 7.356666667 0.46 0.71 7.612143181 121.7391304 78.87323944 -7 -7 -7 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 3L 20994476 20994482 - 3L_20994476_20994482_- 0.782165141 0.782902735 0.782533938 0.000521562 skd FBtr0078328|FBtr0112830|FBtr0078329|FBtr0333284 20994129|20994129|20992812|20994129 20995703|20995703|20995703|20995703 3L - 20994463 20994526 3'utr skd FlyBase G38807.1 CACATAGCCAATTTTCTAATAATGGAATACTTAAACGAAAATGTGTACAAATTAATAATAACGA 8 20994485 0.982249178 5 7 57 0.888888889 0.602059991 0.333333333 0.125 0.222222222 8 0 1 8 3L:20994463-20994526 7 skd FBtr0078329|FBtr0333284|FBtr0078328|FBtr0112830 20992812|20994129|20994129|20994129 20995703|20995703|20995703|20995703 GTACAAA 7mer-A1 dme-miR-305-5p 3L - 20994465 20994498 3'utr skd FlyBase G29300.1 ACTTAAACGAAAATGTGTACAAATTAATAATAAC 8 20994485 0.958967905 2 8 41 1 1.041392685 0 0.375 0.545454545 8 0 0 11 3L:20994465-20994498 7 6.5 2065 FBgn0003415 2022.95 23.24 35.72666667 0.003213129 0.279690189 0.181936929 3 3 3 0.15 dme-miR-999-3p 7mer-m8 AGTTAAC 3L 20995128 20995134 - 3L_20995128_20995134_- 0.66865235 0.674195823 0.671424086 0.003919846 skd FBtr0078328|FBtr0112830|FBtr0078329|FBtr0333284 20994129|20994129|20992812|20994129 20995703|20995703|20995703|20995703 3L - 20995117 20995147 3'utr skd FlyBase G38812.1 AATAGCGGAGTGGAGTTAACGCGAGAAACAT 8 20995132 0.893418574 4 7 21 0.8 0.903089987 0.1 0.25 0.4 8 2 0 8 3L:20995117-20995147 7 skd FBtr0078329|FBtr0333284|FBtr0078328|FBtr0112830 20992812|20994129|20994129|20994129 20995703|20995703|20995703|20995703 AGTTAAC 7mer-m8 dme-miR-999-3p 3L - 20995119 20995155 3'utr skd FlyBase G29304.1 ATATATACAATAGCGGAGTGGAGTTAACGCGAGAAAC 5 20995133 0.948251958 3 5 18 1 0.954242509 0 0.6 0.777777778 5 0 0 9 3L:20995119-20995155 7 6.5 2066 FBgn0003415 2022.95 23.24 35.72666667 0.003213129 0.279690189 0.181936929 -2 -1 -1.5 0.15 dme-miR-304-5p 6mer3-8 TGAGAT 3L 20995209 20995214 - 3L_20995209_20995214_- 0.834033392 0.824440382 0.829236887 0.006783275 skd FBtr0078328|FBtr0112830|FBtr0078329|FBtr0333284 20994129|20994129|20992812|20994129 20995703|20995703|20995703|20995703 3L - 20995188 20995281 3'utr skd FlyBase G38813.1 TTATATATATACATAGGCTGGCGTTCGATTAGTGTTTAATATTTATAAATATACAAAGGGGAGCGAATGAGATAGCAAAAAGCAAACAACAACA 260 20995214 0.972717916 6 250 412 0.960573477 1.951013539 0.0609319 0.069498069 0.136200717 259 9 2 268 3L:20995188-20995281 6 skd FBtr0078329|FBtr0333284|FBtr0078328|FBtr0112830 20992812|20994129|20994129|20994129 20995703|20995703|20995703|20995703 TGAGAT 6mer3-8 dme-miR-304-5p 3L - 20995187 20995288 3'utr skd FlyBase G29305.1 TTTATTTTTATATATATACATAGGCTGGCGTTCGATTAGTGTTTAATATTTATAAATATACAAAGGGGAGCGAATGAGATAGCAAAAAGCAAACAACAACAA 138 20995214 0.973194287 9 133 269 0.970731707 2.298853076 0.126829268 0.333333333 0.551219512 138 6 0 199 3L:20995187-20995288 6 189.5 2067 FBgn0003415 2022.95 23.24 35.72666667 0.093675078 8.15404475 5.304161224 0 0 0 0.15 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 21074840 21074845 + 3L_21074840_21074845_+ 0.965477184 0.991785208 0.978631196 0.018602565 siz FBtr0078290|FBtr0301602|FBtr0078289|FBtr0111038 21074675|21074675|21074675|21074675 21075444|21075444|21075444|21075444 3L + 21074808 21074861 3'utr siz FlyBase G31948.1 CACAGCGTACGAGTATATAGTGAATTCTTAATGTTCCTTCGTTCTCTGCTAATA 29 21074839 0.99334016 3 26 322 0.914285714 1.505149978 0.057142857 0.206896552 0.342857143 29 3 0 32 3L:21074808-21074861 6 siz FBtr0078289|FBtr0111038|FBtr0078290|FBtr0301602 21074675|21074675|21074675|21074675 21075444|21075444|21075444|21075444 GTTCCT 6mer2-7 dme-miR-276a-3p 3L + 21074818 21074868 3'utr siz FlyBase G24146.1 GAGTATATAGTGAATTCTTAATGTTCCTTCGTTCTCTGCTAATATTAATGT 17 21074839 0.838481395 4 15 201 0.88 1.041392685 0 0.411764706 0.6 17 2 1 22 3L:21074818-21074868 6 22 2068 FBgn0026179 221.43 5.13 7.85 0.099354198 4.288499025 2.802547771 1 1 1 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3L 21136876 21136882 - 3L_21136876_21136882_- 0.657501637 0.660263067 0.658882352 0.001952675 Ac78C FBtr0330067|FBtr0301701|FBtr0333358|FBtr0330066|FBtr0305501 21136445|21136445|21136445|21136445|21136445 21137079|21137106|21137106|21137106|21137106 3L - 21136859 21136896 3'utr Ac78C FlyBase G38869.1 TATCTCAGCACAATTCTAGTCGTTAAACTTAAGAACTG 28 21136883 0.862302378 3 27 202 0.96875 1.491361694 0 0.107142857 0.21875 28 1 0 31 3L:21136859-21136896 7 Ac78C FBtr0305501|FBtr0330066|FBtr0333358|FBtr0301701|FBtr0330067 21136445|21136445|21136445|21136445|21136445 21137106|21137106|21137106|21137106|21137079 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3L - 21136861 21136899 3'utr Ac78C FlyBase G29348.1 ATTTATCTCAGCACAATTCTAGTCGTTAAACTTAAGAAC 17 21136883 0.848034139 2 17 130 1 1.414973348 0 0.352941176 0.576923077 17 0 0 26 3L:21136861-21136899 7 22.5 2069 FBgn0024150 386.8566667 7.673333333 11.87 0.058161076 2.932232841 1.895534962 1 1 1 0.15 dme-miR-283-5p 8mer-m1 TGATATTT 3L 21207717 21207724 + 3L_21207717_21207724_+ 0.555276735 0.555236232 0.555256483 2.86E-05 CG10512 FBtr0078299|FBtr0078297|FBtr0078298|FBtr0078300 21207593|21207593|21207593|21207593 21208092|21208092|21208092|21208092 3L + 21207690 21207828 3'utr CG10512 FlyBase G31999.1 AGTAACACTTTACACTGAGAGAAATATTGATATTTGCAACAGTTAGATTAGATTGCACTGGTGCTGAACTAAAGCTAGTTACATATCTCCATGTTGCACTTAAAACATATTTCTAGTCTCCTAAGAGTCTGTCGTTGCT 339 21207716 0.75351299 38 296 2568 0.883663366 1.950608225 0.222772277 0.16519174 0.29950495 339 44 3 357 3L:21207690-21207828 8 CG10512 FBtr0078300|FBtr0078298|FBtr0078297|FBtr0078299 21207593|21207593|21207593|21207593 21208092|21208092|21208092|21208092 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 21207690 21207830 3'utr CG10512 FlyBase G24183.1 AGTAACACTTTACACTGAGAGAAATATTGATATTTGCAACAGTTAGATTAGATTGCACTGGTGCTGAACTAAAGCTAGTTACATATCTCCATGTTGCACTTAAAACATATTTCTAGTCTCCTAAGAGTCTGTCGTTGCTCC 174 21207716 0.755643385 25 154 1326 0.882142857 2.392696953 0.210714286 0.454022989 0.660714286 174 33 0 247 3L:21207690-21207830 8 141.5 2070 FBgn0037057 268.2233333 18.25666667 27.67 0.527545453 7.750593391 5.113841706 1 1 1 0.15 dme-miR-317-3p 8mer-A1 TGTGTTCA 3L 21208040 21208047 + 3L_21208040_21208047_+ 0.412348446 0.363475486 0.387911966 0.034558359 CG10512 FBtr0078299|FBtr0078297|FBtr0078298|FBtr0078300 21207593|21207593|21207593|21207593 21208092|21208092|21208092|21208092 3L + 21207982 21208095 3'utr CG10512 FlyBase G32000.2 AAAACAAAAACTATCTGTTTTAAAATATATTGATTTTGGCACTTTGAGATACCCATGCTGTGTTCAGCAATTTCAAAACTATTAAAATAAACAATATACTCTTCGATAATCAAA 189 21208037 0.839962392 15 187 1232 0.991452991 2.064457989 0.017094017 0.201058201 0.354700855 189 1 1 232 3L:21207982-21208095 8 CG10512 FBtr0078300|FBtr0078298|FBtr0078297|FBtr0078299 21207593|21207593|21207593|21207593 21208092|21208092|21208092|21208092 TGTGTTCA 8mer-A1 dme-miR-317-3p 3L + 21208015 21208088 3'utr CG10512 FlyBase G24185.1 TTTTGGCACTTTGAGATACCCATGCTGTGTTCAGCAATTTCAAAACTATTAAAATAAACAATATACTCTTCGAT 165 21208037 0.853424493 10 157 1084 0.931034483 2.385606274 0.007662835 0.406060606 0.624521073 165 18 0 243 3L:21208015-21208088 8 168 2071 FBgn0037057 268.2233333 18.25666667 27.67 0.626343719 9.202117948 6.071557644 3 3 3 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 3L 21219029 21219034 + 3L_21219029_21219034_+ 0.997703853 0.95728128 0.977492567 0.028583095 Ilk FBtr0078305 21218943 21219240 3L + 21218965 21219172 3'utr Ilk FlyBase G32011.1 AAATGCCAAGCCAAAATGTGCCTTGAGAAACCTTAGATTTGCCAACTAATTGTAATTACTACTTTGTGTTACCTTTGTCTAACTGAGCCTAACCGAAAACCGTACCGAAATGGCAAAGCAAGTGCAACTGCTCTGTCTAGAGTTTATGTTTCTGTGTCTCACTGTTCTCTACTTATGATTTTCCGTCGATGTTTAGTGCGGGTGCTCG 123 21219040 0.948285788 29 115 1086 0.966887417 2.164352856 0.152317881 0.203252033 0.350993377 123 5 0 146 3L:21218965-21219172 6 Ilk FBtr0078305 21218943 21219240 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 21218972 21219085 3'utr Ilk FlyBase G24193.1 AAGCCAAAATGTGCCTTGAGAAACCTTAGATTTGCCAACTAATTGTAATTACTACTTTGTGTTACCTTTGTCTAACTGAGCCTAACCGAAAACCGTACCGAAATGGCAAAGCAA 52 21219040 0.988980554 13 48 452 0.956521739 1.944482672 0.086956522 0.461538462 0.695652174 52 4 0 88 3L:21218972-21219085 6 47.5 2072 FBgn0028427 517.3333333 43.88 67.08 0.09181701 1.082497721 0.70810972 -11 -11 -11 0.15 dme-miR-184-3p 6mer2-7 CCGTCC 3L 2126105 2126110 - 3L_2126105_2126110_- 0.984545445 0.984026421 0.984285933 0.000366988 zormin FBtr0332117 2117464 2126635 3L - 2126073 2126129 5'utr zormin FlyBase G33634.1 AACAGCCACAGGCCACATCCCGTCCGACCATGTACTACAATGCTGTTGCTGGAGCTC 141 2126112 0.96916555 3 139 307 0.987878788 2.212187604 0.012121212 0.141843972 0.266666667 141 2 0 163 3L:2126073-2126129 6 zormin FBtr0332117 2117464 2126635 CCGTCC 6mer2-7 dme-miR-184-3p 3L - 2126071 2126133 5'utr zormin FlyBase G25434.1 CAGAAACAGCCACAGGCCACATCCCGTCCGACCATGTACTACAATGCTGTTGCTGGAGCTCCG 48 2126112 0.967881844 3 48 80 1 1.886490725 0.051948052 0.479166667 0.675324675 48 0 0 77 3L:2126071-2126133 6 92.5 2073 FBgn0052311 753.3466667 9.526666667 14.67333333 0.122785437 9.709587124 6.303952749 2 2 2 0.15 dme-miR-307a-3p 7mer-A1 GTTGTGA 3L 21271302 21271308 - 3L_21271302_21271308_- 0.814216499 0.814163539 0.814190019 3.75E-05 AcCoAS FBtr0333126|FBtr0078413|FBtr0078414 21271207|21270720|21271207 21271704|21271704|21271704 3L - 21271274 21271342 3'utr AcCoAS FlyBase G38885.1 TCGTTGTAGTCGTAGTTTAAGTTCTCGCTAATTCGTTGTGATACAAATTTAATTATATCTTACTTATGT 255 21271309 0.736483011 18 230 2338 0.903846154 1.274157849 0.480769231 0.173228346 0.326923077 254 16 14 282 3L:21271274-21271342 7 AcCoAS FBtr0078413|FBtr0078414|FBtr0333126 21270720|21271207|21271207 21271704|21271704|21271704 GTTGTGA 7mer-A1 dme-miR-307a-3p 3L - 21271270 21271341 3'utr AcCoAS FlyBase G29358.1 CGTTGTAGTCGTAGTTTAAGTTCTCGCTAATTCGTTGTGATACAAATTTAATTATATCTTACTTATGTATGT 154 21271308 0.691948948 16 136 1388 0.887029289 1.627365857 0.464435146 0.376623377 0.59832636 154 23 4 212 3L:21271270-21271341 7 191.5 2074 FBgn0012034 1039.716667 45.38666667 69.30333333 0.184184794 4.219300823 2.763214853 1 0 0.5 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 3L 21280652 21280657 - 3L_21280652_21280657_- 0.999999997 0.999999388 0.999999692 4.24E-07 ppl FBtr0078412 21280489 21280688 3L - 21280624 21280742 stop_codon ppl FlyBase G38901.1 CTTATGACCGAGGATCAGTACAAAGCCTTCCTGAGCAGCAGTGGGGATCACTAGAACCAGCAGCTAATCCTAACCCTAAAGCATCTTGACTGTAGCCTTTAAAACGAGTAATTGTTAGC 33 21280650 0.971040779 9 31 183 0.918918919 1.054357662 0.054054054 0.090909091 0.189189189 33 1 2 34 3L:21280624-21280742 6 ppl FBtr0078412 21280489 21280688 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 21280638 21280670 3'utr ppl FlyBase G29373.1 ACCCTAAAGCATCTTGACTGTAGCCTTTAAAAC 15 21280656 0.634234328 3 15 92 1 1.380211242 0 0.466666667 0.666666667 15 0 0 24 3L:21280638-21280670 6 17 2075 FBgn0027945 285 39.5 59.95666667 0.059649123 0.430379747 0.283538111 -7 -1 -4 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 21302523 21302528 - 3L_21302523_21302528_- 0.493828692 0.730279288 0.61205399 0.167195823 CG11309 FBtr0078407|FBtr0078407|FBtr0078407|FBtr0331798|FBtr0331798|FBtr0331798|FBtr0321283|FBtr0321283|FBtr0321283|FBtr0321282|FBtr0321282|FBtr0321282|FBtr0345883|FBtr0345883|FBtr0345883|FBtr0078406|FBtr0078406|FBtr0078406 21302274|21302274|21302274|21302478|21302478|21302478|21302274|21302274|21302274|21302478|21302478|21302478|21301783|21301783|21301783|21302478|21302478|21302478 21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604 3L - 21302497 21302563 3'utr CG11309 FlyBase G38905.1 ATTGTACAGGTTTTTATACTTAATTGTTTATGCTATGTGATCGCGGCAGAGGACTCGGCTCTGCTAT 16 21302550 0.81657032 10 14 139 0.842105263 1.204119983 0.210526316 0.1875 0.315789474 16 3 0 16 3L:21302497-21302563 6 CG11309 FBtr0321282|FBtr0321282|FBtr0321282|FBtr0321283|FBtr0321283|FBtr0321283|FBtr0331798|FBtr0331798|FBtr0331798|FBtr0078407|FBtr0078407|FBtr0078407|FBtr0078406|FBtr0078406|FBtr0078406|FBtr0345883|FBtr0345883|FBtr0345883 21302478|21302478|21302478|21302274|21302274|21302274|21302478|21302478|21302478|21302274|21302274|21302274|21302478|21302478|21302478|21301783|21301783|21301783 21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 21302512 21302550 3'utr CG11309 FlyBase G29377.1 TTATACTTAATTGTTTATGCTATGTGATCGCGGCAGAGG 8 21302534 0.980490356 5 7 58 0.9 1.255272505 0.8 0.625 0.85 8 2 0 18 3L:21302512-21302550 6 8.5 2076 FBgn0037070 162.24 12.80666667 19.53 0.052391519 0.663716814 0.435227855 22 6 14 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 21306029 21306034 + 3L_21306029_21306034_+ 0.977632317 0.95909239 0.968362354 0.013109689 CG7632 FBtr0321281|FBtr0078339 21305971|21305971 21306197|21306197 3L + 21305972 21306087 3'utr CG7632 FlyBase G32041.1 AGACCGCCTTAACATAGACCTCGACATATAGACCCGTGTACAAACTAGCGGATTCGTGTACCTTACTCCTAATGTTTAATTTAACCCAACGCAGATTGATGATATTTACTGGATAT 78 21306028 0.934855111 8 77 531 0.988764045 1.944482672 0.02247191 0.128205128 0.235955056 78 1 0 88 3L:21305972-21306087 6 CG7632 FBtr0321281|FBtr0078339 21305971|21305971 21306197|21306197 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 21305971 21306093 stop_codon CG7632 FlyBase G24218.1 GAGACCGCCTTAACATAGACCTCGACATATAGACCCGTGTACAAACTAGCGGATTCGTGTACCTTACTCCTAATGTTTAATTTAACCCAACGCAGATTGATGATATTTACTGGATATTATATG 55 21306028 0.98199323 9 54 402 1 1.908485019 0.086419753 0.363636364 0.567901235 55 0 0 81 3L:21305971-21306093 6 43 2077 FBgn0037071 107.9566667 9.143333333 13.89 0.398307963 4.702880058 3.09575234 1 1 1 0.15 dme-miR-305-5p 7mer-m1 GTACAAT 3L 21306162 21306168 + 3L_21306162_21306168_+ 0.749096951 0.742949118 0.746023035 0.004347222 CG7632 FBtr0321281|FBtr0078339 21305971|21305971 21306197|21306197 3L + 21306129 21306192 3'utr CG7632 FlyBase G32042.1 TGGAAAATTGGTTGCTTCTATTTAATTTATTATGTACAATCAATACCGGCAATAACATTAATGT 8 21306171 0.922158544 4 8 58 1 0.954242509 0 0.125 0.222222222 8 0 0 9 3L:21306129-21306192 7 CG7632 FBtr0321281|FBtr0078339 21305971|21305971 21306197|21306197 GTACAAT 7mer-m1 dme-miR-305-5p 3L + 21306125 21306194 3'utr CG7632 FlyBase G24219.1 ACATTGGAAAATTGGTTGCTTCTATTTAATTTATTATGTACAATCAATACCGGCAATAACATTAATGTTA 14 21306137 0.89570349 6 13 110 0.933333333 0.84509804 0 0.071428571 0.133333333 14 0 1 14 3L:21306125-21306194 7 4.5 2078 FBgn0037071 107.9566667 9.143333333 13.89 0.041683391 0.492161867 0.323974082 -9 25 8 0.15 dme-miR-965-3p 8mer-A1 TACGCTTA 3L 21315830 21315837 - 3L_21315830_21315837_- 0.622538837 0.622648174 0.622593506 7.74E-05 Pc FBtr0078405 21306136 21316423 3L - 21315800 21315873 5'utr Pc FlyBase G38913.1 AAGAAAACTCCATGCGAAACCGAAGCAATTGTTGATTACGCTTACAAATATATACAATAGAAGATGCATATATT 37 21315838 0.984513143 5 36 284 0.977777778 1.643452676 0.244444444 0.189189189 0.333333333 37 1 0 44 3L:21315800-21315873 8 Pc FBtr0078405 21306136 21316423 TACGCTTA 8mer-A1 dme-miR-965-3p 3L - 21315810 21315860 5'utr Pc FlyBase G29383.1 GCGAAACCGAAGCAATTGTTGATTACGCTTACAAATATATACAATAGAAGA 20 21315838 0.984584544 2 20 166 1 1.505149978 0.3125 0.3 0.5625 20 0 0 32 3L:21315810-21315860 8 27 2079 FBgn0003042 426.7466667 21.12 32.45666667 0.063269387 1.278409091 0.831878402 1 1 1 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 3L 21423499 21423505 + 3L_21423499_21423505_+ 0.602621486 0.602382342 0.602501914 0.00016914 rgn FBtr0333386|FBtr0078346|FBtr0309230|FBtr0333385 21423268|21423268|21423268|21423268 21424061|21424416|21424061|21424061 3L + 21423465 21423544 3'utr rgn FlyBase G32060.1 ATCGCTGCGAAGCAGATTTTGTCGGTTAATTAATTGCATTTCGATCGAGCAGGAAACCCAATCTCCATGCGCTTCGCTAG 9 21423498 0.979194534 3 9 63 1 1 0.6 0.111111111 0.2 9 0 0 10 3L:21423465-21423544 7 rgn FBtr0309230|FBtr0333385|FBtr0333386|FBtr0078346 21423268|21423268|21423268|21423268 21424061|21424061|21424061|21424416 TGCATTT 7mer-m8 dme-miR-277-3p 3L + 21423487 21423549 3'utr rgn FlyBase G24234.1 CGGTTAATTAATTGCATTTCGATCGAGCAGGAAACCCAATCTCCATGCGCTTCGCTAGCTATT 9 21423498 0.883239931 2 9 68 1 1.146128036 0.285714286 0.555555556 0.714285714 9 0 0 14 3L:21423487-21423549 7 5.5 2080 FBgn0261258 1418.933333 41.47666667 64.17666667 0.003876151 0.132604677 0.08570093 1 1 1 0.15 dme-miR-965-3p 8mer-A1 TACGCTTA 3L 21436804 21436811 + 3L_21436804_21436811_+ 0.6252794 0.625362414 0.625320907 5.87E-05 Aef1 FBtr0330156|FBtr0078348|FBtr0078350|FBtr0078349 21436646|21436208|21436208|21436208 21437491|21438639|21437491|21437491 3L + 21436763 21436827 3'utr Aef1 FlyBase G32068.1 AGGAGCAGCGATCGAGCCAGAAGTGAGCCATGTTTGGTGTGTACGCTTACGTTGTTGTTAGTTGT 11 21436803 0.99120693 4 10 108 1 1.079181246 0.25 0.090909091 0.166666667 11 0 0 12 3L:21436763-21436827 8 Aef1 FBtr0330156|FBtr0078348|FBtr0078350|FBtr0078349 21436646|21436208|21436208|21436208 21437491|21438639|21437491|21437491 TACGCTTA 8mer-A1 dme-miR-965-3p 3L + 21436741 21436827 3'utr Aef1 FlyBase G24241.1 GTGGAAATTCAGGAGCAGAAAGAGGAGCAGCGATCGAGCCAGAAGTGAGCCATGTTTGGTGTGTACGCTTACGTTGTTGTTAGTTGT 10 21436786 0.99966469 6 9 63 0.909090909 0.698970004 0.454545455 0.1 0.181818182 10 0 1 10 3L:21436741-21436827 8 6.5 2081 FBgn0005694 574.74 23.47666667 36.08 0.011309462 0.276870652 0.180155211 1 18 9.5 0.15 dme-miR-1012-3p 7mer-A1 TGACTAA 3L 21436872 21436878 + 3L_21436872_21436878_+ 0.819930478 0.81131555 0.815623014 0.006091725 Aef1 FBtr0330156|FBtr0078348|FBtr0078350|FBtr0078349 21436646|21436208|21436208|21436208 21437491|21438639|21437491|21437491 3L + 21436850 21436890 3'utr Aef1 FlyBase G32069.1 TTGTTGTTAAGGTTTAAATGTGTGACTAAGAACTTACCAAG 6 21436868 0.970241029 3 5 44 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 3L:21436850-21436890 7 Aef1 FBtr0330156|FBtr0078348|FBtr0078350|FBtr0078349 21436646|21436208|21436208|21436208 21437491|21438639|21437491|21437491 TGACTAA 7mer-A1 dme-miR-1012-3p 3L + 21436831 21436903 3'utr Aef1 FlyBase G24242.1 ATTGTAGCGAACATTGTTGTTGTTGTTAAGGTTTAAATGTGTGACTAAGAACTTACCAAGATGATTGTATAGC 11 21436870 0.977204163 7 11 80 1 1.342422681 0.363636364 0.545454545 0.772727273 11 0 0 22 3L:21436831-21436903 7 6 2082 FBgn0005694 574.74 23.47666667 36.08 0.010439503 0.255572909 0.166297118 4 2 3 0.15 dme-miR-988-3p 6mer2-7 CAAGGG 3L 21437378 21437383 + 3L_21437378_21437383_+ 0.999990024 0.999984558 0.999987291 3.82E-06 Aef1 FBtr0330156|FBtr0078348|FBtr0078350|FBtr0078349 21436646|21436208|21436208|21436208 21437491|21438639|21437491|21437491 3L + 21437338 21437410 3'utr Aef1 FlyBase G32070.1 GTTGTACAACTCAAAGTTGGTGACGTTTTTCGCCATCTTGCAAGGGCGTGTTTTAGTCTGGGCTAACACAAAT 15 21437376 0.982115308 7 14 106 1 1.230448921 0.352941176 0.133333333 0.235294118 15 0 0 17 3L:21437338-21437410 6 Aef1 FBtr0330156|FBtr0078348|FBtr0078350|FBtr0078349 21436646|21436208|21436208|21436208 21437491|21438639|21437491|21437491 CAAGGG 6mer2-7 dme-miR-988-3p 3L + 21437342 21437422 3'utr Aef1 FlyBase G24243.1 TACAACTCAAAGTTGGTGACGTTTTTCGCCATCTTGCAAGGGCGTGTTTTAGTCTGGGCTAACACAAATACAATTTGTTTA 17 21437376 0.959326012 7 17 112 1 1.491361694 0.483870968 0.411764706 0.677419355 17 0 0 31 3L:21437342-21437422 6 11.5 2083 FBgn0005694 574.74 23.47666667 36.08 0.020009048 0.489848076 0.318736142 2 2 2 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 3L 21437764 21437770 + 3L_21437764_21437770_+ 0.782680406 0.782893754 0.78278708 0.000150897 Aef1 FBtr0078348 21436208 21438639 3L + 21437747 21437806 3'utr Aef1 FlyBase G32073.1 GTAAAGCAACAAGTTCTGTACAAAGCCCAACTCCAATTTGTATGTATAAAGCGAAAGCGA 8 21437761 0.940178436 5 8 35 1 0.903089987 0 0 0 8 0 0 8 3L:21437747-21437806 7 Aef1 FBtr0078348 21436208 21438639 GTACAAA 7mer-A1 dme-miR-305-5p 3L + 21437751 21437786 3'utr Aef1 FlyBase G24245.1 AGCAACAAGTTCTGTACAAAGCCCAACTCCAATTTG 6 21437762 0.758988063 4 5 23 0.857142857 0.77815125 0.142857143 0.166666667 0.285714286 6 1 0 6 3L:21437751-21437786 7 6 2084 FBgn0005694 574.74 23.47666667 36.08 0.010439503 0.255572909 0.166297118 3 2 2.5 0.15 dme-miR-1007-3p 6mer3-8 TGAGCT 3L 21438978 21438983 - 3L_21438978_21438983_- 0.99793485 0.999450092 0.998692471 0.001071479 CG5664 FBtr0331822 21438626 21439731 3L - 21438965 21439002 3'utr CG5664 FlyBase G38953.2 ACCTATCTGAACAACTTTCTGAGCTATGAAGAGTCCAT 8 21438983 0.771730533 2 7 50 0.888888889 0.602059991 0.111111111 0.125 0.222222222 8 0 1 8 3L:21438965-21439002 6 CG5664 FBtr0331822 21438626 21439731 TGAGCT 6mer3-8 dme-miR-1007-3p 3L - 21438935 21439002 3'utr CG5664 FlyBase G29421.1 ACCTATCTGAACAACTTTCTGAGCTATGAAGAGTCCATGTCTCCAGTAGACTCTGCGTCTTCCTCCTT 7 21438983 0.979021754 3 7 56 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3L:21438935-21439002 6 6.5 2085 FBgn0037082 240.3466667 11.07666667 16.92666667 0.027044269 0.586819139 0.384009453 0 0 0 0.15 dme-miR-282-5p 6mer2-7 GAGGCT 3L 21439311 21439316 - 3L_21439311_21439316_- 0.999999985 0.999985202 0.999992593 1.05E-05 CG5664 FBtr0331822 21438626 21439731 3L - 21439292 21439388 3'utr CG5664 FlyBase G38954.1 AGTTGTCGCGTGAGGATTACCTAGCATTACTCCTTAGCGCCTTAAAAGACTATGACAAGTGGTTAAATCTTGGAGGCTTTTGGAAGTACCTAATGAG 16 21439318 0.987719868 7 15 129 0.952380952 1.301029996 0.285714286 0.3125 0.476190476 16 1 0 20 3L:21439292-21439388 6 CG5664 FBtr0331822 21438626 21439731 GAGGCT 6mer2-7 dme-miR-282-5p 3L - 21439300 21439332 3'utr CG5664 FlyBase G29422.1 AAGTGGTTAAATCTTGGAGGCTTTTGGAAGTAC 7 21439318 0.770065742 3 7 61 1 1.079181246 0.083333333 0.428571429 0.666666667 7 0 0 12 3L:21439300-21439332 6 9 2086 FBgn0037082 240.3466667 11.07666667 16.92666667 0.037445911 0.812518808 0.531705396 2 2 2 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3L 21439663 21439670 - 3L_21439663_21439670_- 0.646525145 0.626696802 0.636610973 0.014020725 CG5664 FBtr0331822|FBtr0331822|FBtr0331822 21438626|21438626|21438626 21439731|21439731|21439731 3L - 21439608 21439685 3'utr CG5664 FlyBase G38955.1 AGTACGAGGATAATGCTGTGATATATCCTAGTATGGGACCCCAAACCCATCTGCTCATCGAAGACTTCTTCAAGATTT 17 21439672 0.980565538 8 16 114 0.947368421 1.255272505 0.263157895 0.117647059 0.210526316 17 1 0 18 3L:21439608-21439685 8 CG5664 FBtr0331822|FBtr0331822|FBtr0331822 21438626|21438626|21438626 21439731|21439731|21439731 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 21439646 21439690 3'utr CG5664 FlyBase G29423.1 GCTAAAGTACGAGGATAATGCTGTGATATATCCTAGTATGGGACC 10 21439673 0.986967979 3 8 73 0.8 1.079181246 0.4 0.3 0.533333333 10 3 0 12 3L:21439646-21439690 8 11.5 2087 FBgn0037082 240.3466667 11.07666667 16.92666667 0.047847554 1.038218477 0.679401339 2 3 2.5 0.15 dme-miR-307a-3p 7mer-A1 GTTGTGA 3L 21447696 21447702 + 3L_21447696_21447702_+ 0.823347659 0.823166883 0.823257271 0.000127845 Syx7 FBtr0078351|FBtr0078352 21447650|21447650 21448128|21448128 3L + 21447645 21447719 stop_codon Syx7 FlyBase G32078.1 GAATTAGAGCCTTCCGGCATCTCCGAATGATTCAAACCAAACTAGTAAATTGTTGTGAAAAGACAAGAGTTGCCG 9 21447695 0.977275824 7 8 53 0.818181818 0.954242509 0.181818182 0.222222222 0.363636364 9 2 0 9 3L:21447645-21447719 7 Syx7 FBtr0078351|FBtr0078352 21447650|21447650 21448128|21448128 GTTGTGA 7mer-A1 dme-miR-307a-3p 3L + 21447669 21447720 3'utr Syx7 FlyBase G24253.1 GAATGATTCAAACCAAACTAGTAAATTGTTGTGAAAAGACAAGAGTTGCCGC 11 21447696 0.971281813 5 9 55 0.944444444 1.230448921 0.055555556 0.636363636 0.777777778 11 1 0 17 3L:21447669-21447720 7 8 2088 FBgn0086377 809 63.10333333 96.81333333 0.009888752 0.126776187 0.082633246 1 0 0.5 0.15 dme-miR-305-5p 8mer-A1 AGTACAAA 3L 21497809 21497816 - 3L_21497809_21497816_- 0.605245557 0.604770618 0.605008088 0.000335876 Glg1 FBtr0078388|FBtr0332717 21497547|21497547 21498214|21498214 3L - 21497801 21497838 3'utr Glg1 FlyBase G38971.1 TACGGCAGAGCGCCTAGTTTTGAGTACAAAAGTTAAGT 40 21497819 0.944767221 5 40 264 1 1.643452676 0.25 0.1 0.181818182 40 0 0 44 3L:21497801-21497838 8 Glg1 FBtr0078388|FBtr0332717 21497547|21497547 21498214|21498214 AGTACAAA 8mer-A1 dme-miR-305-5p 3L - 21497805 21497837 3'utr Glg1 FlyBase G29436.1 ACGGCAGAGCGCCTAGTTTTGAGTACAAAAGTT 12 21497819 0.961536889 3 12 80 1 1.278753601 0.210526316 0.5 0.684210526 12 0 0 19 3L:21497805-21497837 8 26 2089 FBgn0264561 1367.6 37.22 56.66666667 0.019011407 0.698549167 0.458823529 3 3 3 0.15 dme-miR-1003-3p 6mer2-7 TGTGAG 3L 21498065 21498070 - 3L_21498065_21498070_- 0.624702873 0.987658391 0.806180632 0.256648295 Glg1 FBtr0078388|FBtr0332717 21497547|21497547 21498214|21498214 3L - 21498016 21498100 3'utr Glg1 FlyBase G38973.1 CACTCAACCCTGTCTGCCTTTCGATATTTGTGTGAGCAATTTGTGGCTTAGTCGTTTGTAAGACCAAAAAATACGCGAGAAAGGA 22 21498059 0.985820918 11 21 163 0.965517241 1.447158031 0.448275862 0.227272727 0.413793103 22 1 0 28 3L:21498016-21498100 6 Glg1 FBtr0078388|FBtr0332717 21497547|21497547 21498214|21498214 TGTGAG 6mer2-7 dme-miR-1003-3p 3L - 21498011 21498100 3'utr Glg1 FlyBase G29438.1 CACTCAACCCTGTCTGCCTTTCGATATTTGTGTGAGCAATTTGTGGCTTAGTCGTTTGTAAGACCAAAAAATACGCGAGAAAGGAGAACA 15 21498059 0.984079317 8 14 101 0.952380952 1 0.285714286 0.4 0.571428571 15 0 1 20 3L:21498011-21498100 6 8 2090 FBgn0264561 1367.6 37.22 56.66666667 0.005849664 0.214938205 0.141176471 -11 -11 -11 0.15 dme-miR-14-3p 6mer2-7 AGACTG 3L 21498199 21498204 - 3L_21498199_21498204_- 0.998918619 0.999926265 0.999422442 0.000712552 Glg1 FBtr0078388|FBtr0332717 21497547|21497547 21498214|21498214 3L - 21498137 21498276 stop_codon Glg1 FlyBase G38974.1 TCCTCACCGGCATCTTCCTGGGACGGGCCACCAAACGGGCAATGGGCTTAAAGAATAAATAATTGAAATATTAGACTGTAGTGGCACTGTGTAGGCGGAGTGTGCATGTTTGTGAGCTTGCTGATTTCCATTTCGGCCCA 546 21498206 0.989258442 20 532 3875 0.968553459 1.886490725 0.11163522 0.137362637 0.259433962 546 13 7 616 3L:21498137-21498276 6 Glg1 FBtr0078388|FBtr0332717 21497547|21497547 21498214|21498214 AGACTG 6mer2-7 dme-miR-14-3p 3L - 21498151 21498257 stop_codon Glg1 FlyBase G29439.1 GGGACGGGCCACCAAACGGGCAATGGGCTTAAAGAATAAATAATTGAAATATTAGACTGTAGTGGCACTGTGTAGGCGGAGTGTGCATGTTTGTGAGCTTGCTGATT 269 21498206 0.980399184 12 249 1763 0.941860465 1.653212514 0.11627907 0.423791822 0.639534884 269 17 8 405 3L:21498151-21498257 6 356.5 2091 FBgn0264561 1367.6 37.22 56.66666667 0.260675636 9.578183772 6.291176471 2 2 2 0.15 dme-miR-305-3p 7mer-m8 ATGTGCC 3L 21511831 21511837 + 3L_21511831_21511837_+ 0.67411967 0.674290919 0.674205295 0.000121057 M6 FBtr0339793 21511707 21512749 3L + 21511781 21511865 3'utr M6 FlyBase G32087.1 TGGCCACTCTGTCCACCCTTTTGGTGCTGCTCAGTCTGGTCCACTACCTGATGTGCCTGTCTGCTAACTACGCCCACATTCGGGA 23 21511832 0.985853263 5 22 171 0.961538462 1.397940009 0.269230769 0.086956522 0.192307692 23 1 0 25 3L:21511781-21511865 7 M6 FBtr0339793 21511707 21512749 ATGTGCC 7mer-m8 dme-miR-305-3p 3L + 21511808 21511847 3'utr M6 FlyBase G24260.1 TGCTCAGTCTGGTCCACTACCTGATGTGCCTGTCTGCTAA 7 21511832 0.811613588 2 7 59 1 1.113943352 0 0.857142857 0.923076923 7 0 0 13 3L:21511808-21511847 7 12.5 2092 FBgn0037092 152.03 9.373333333 14.24333333 0.082220614 1.333570413 0.877603557 -1 -1 -1 0.15 dme-miR-184-3p 8mer-A1 TCCGTCCA 3L 21512254 21512261 + 3L_21512254_21512261_+ 0.517319436 0.505042898 0.511181167 0.008680796 M6 FBtr0332712|FBtr0332713|FBtr0078356|FBtr0332714|FBtr0332715|FBtr0339793 21511946|21511946|21511946|21511946|21511946|21511707 21512749|21512749|21512749|21512749|21512749|21512749 3L + 21512185 21512287 3'utr M6 FlyBase G32088.1 ACTGCCAAATCAAATGTTACACTGAAATTATGCTTCTTATCTACTGTACTGTTCCACTGACTTTTTTCTTCCGTCCATTGACTTAAGTTAGTTTACATTTATT 988 21512253 0.845403067 29 968 12105 0.98245614 2.572096768 0.129824561 0.126518219 0.242982456 988 18 2 1120 3L:21512185-21512287 8 M6 FBtr0332712|FBtr0332713|FBtr0332715|FBtr0339793|FBtr0078356|FBtr0332714 21511946|21511946|21511946|21511707|21511946|21511946 21512749|21512749|21512749|21512749|21512749|21512749 TCCGTCCA 8mer-A1 dme-miR-184-3p 3L + 21512186 21512287 3'utr M6 FlyBase G24263.1 CTGCCAAATCAAATGTTACACTGAAATTATGCTTCTTATCTACTGTACTGTTCCACTGACTTTTTTCTTCCGTCCATTGACTTAAGTTAGTTTACATTTATT 598 21512253 0.770483091 25 572 7045 0.958810069 2.321184027 0.129290618 0.352842809 0.557208238 598 33 3 838 3L:21512186-21512287 8 761 2093 FBgn0037092 152.03 9.373333333 14.24333333 5.005591002 81.18776671 53.42850456 1 1 1 0.15 dme-miR-252-5p 6mer3-8 GTACTT 3L 21513013 21513018 - 3L_21513013_21513018_- 0.932651394 0.927532671 0.930092032 0.003619467 SAK FBtr0078387 21512139 21513065 3L - 21512993 21513032 3'utr SAK FlyBase G38997.1 AAGTTTGAACAAATGTACTTGTATTGTAAATTAAGGGTAA 17 21513019 0.902393648 2 17 153 1 1.322219295 0.047619048 0.176470588 0.333333333 17 0 0 21 3L:21512993-21513032 6 SAK FBtr0078387 21512139 21513065 GTACTT 6mer3-8 dme-miR-252-5p 3L - 21512984 21513033 3'utr SAK FlyBase G29451.1 TAAGTTTGAACAAATGTACTTGTATTGTAAATTAAGGGTAAATATATTTT 8 21513019 0.9829522 2 8 64 1 1.079181246 0.25 0.5 0.666666667 8 0 0 12 3L:21512984-21513033 6 12 2094 FBgn0026371 393.3133333 14.06333333 21.48666667 0.030510026 0.853282768 0.558485883 1 1 1 0.15 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 21521846 21521851 + 3L_21521846_21521851_+ 0.660229206 0.889305195 0.7747672 0.161981193 Cdk12 FBtr0332716|FBtr0078358|FBtr0078357 21521780|21521780|21521780 21522156|21522684|21522156 3L + 21521809 21521888 3'utr Cdk12 FlyBase G32111.1 GTGAAGGAGAGCTACATACAGCGTGAAGGCGAGGAGTGTTCCTGGTGGCACTAGTAACTAGCCGTAACTAGCAATAACGT 23 21521845 0.968018259 4 22 112 0.964285714 1.431363764 0.392857143 0.173913043 0.321428571 23 1 0 27 3L:21521809-21521888 6 Cdk12 FBtr0078357|FBtr0078358|FBtr0332716 21521780|21521780|21521780 21522156|21522684|21522156 GTTCCT 6mer2-7 dme-miR-276a-3p 3L + 21521826 21521869 3'utr Cdk12 FlyBase G24279.1 ACAGCGTGAAGGCGAGGAGTGTTCCTGGTGGCACTAGTAACTAG 9 21521845 0.814845642 3 8 43 1 1.041392685 0.454545455 0.222222222 0.363636364 9 0 0 11 3L:21521826-21521869 6 14 2095 FBgn0037093 1128.82 30.18666667 46.38666667 0.012402332 0.463780919 0.301810865 1 1 1 0.15 dme-miR-1003-3p 7mer-m8 ATGTGAG 3L 21527687 21527693 + 3L_21527687_21527693_+ 0.586269526 0.48859885 0.537434188 0.069063614 CG7611 FBtr0301197|FBtr0078365|FBtr0078364|FBtr0301198|FBtr0078361|FBtr0078366|FBtr0078359|FBtr0078362|FBtr0078363 21527663|21527663|21527663|21527663|21527663|21527663|21527663|21527663|21527663 21528163|21528163|21528163|21528163|21528163|21528163|21528163|21528163|21528163 3L + 21527599 21527811 stop_codon CG7611 FlyBase G32127.1 AGCGCAACGACTGAGAGCGACGATTGCTCTTCTAGCTCGTCTTCGTCCTCCTGGAATATGACTTAAGGTCCCGAGCAGTAGCAAATGGATGTGAGTGGGATAGATTTTGGATGCTGATATAGTTATAGTGCGCCCTGATTTCGATATAAAGCTTAATGCGTACCGCTCTGATGGCGCATCGGGGTCGTCGTTGCTACAAACTGCCATTACAAC 246 21527684 0.915601417 39 235 1600 0.960854093 1.73239376 0.380782918 0.117886179 0.227758007 246 7 4 270 3L:21527599-21527811 7 CG7611 FBtr0078359|FBtr0078362|FBtr0078363|FBtr0078361|FBtr0078366|FBtr0078364|FBtr0301198|FBtr0301197|FBtr0078365 21527663|21527663|21527663|21527663|21527663|21527663|21527663|21527663|21527663 21528163|21528163|21528163|21528163|21528163|21528163|21528163|21528163|21528163 ATGTGAG 7mer-m8 dme-miR-1003-3p 3L + 21527631 21527851 stop_codon CG7611 FlyBase G24295.1 TAGCTCGTCTTCGTCCTCCTGGAATATGACTTAAGGTCCCGAGCAGTAGCAAATGGATGTGAGTGGGATAGATTTTGGATGCTGATATAGTTATAGTGCGCCCTGATTTCGATATAAAGCTTAATGCGTACCGCTCTGATGGCGCATCGGGGTCGTCGTTGCTACAAACTGCCATTACAACAATATGTATGAGCAGCATGACTTACGATTAGCATTAATTA 176 21527684 0.917388009 29 170 1023 0.958955224 2.409933123 0.481343284 0.380681818 0.593283582 176 11 0 257 3L:21527631-21527851 7 117 2096 FBgn0037094 718 25.08 38.30333333 0.162952646 4.66507177 3.054564442 3 3 3 0.15 dme-miR-283-5p 8mer-m1 TGATATTT 3L 21530167 21530174 - 3L_21530167_21530174_- 0.533962927 0.479929209 0.506946068 0.038207596 Mkrn1 FBtr0078383 21529957 21531468 3L - 21530165 21530195 3'utr Mkrn1 FlyBase G39015.1 ATAGCTAAACCTATCCAGAAGTGATATTTTT 8 21530169 0.647468349 4 7 57 0.888888889 0.903089987 0 0.125 0.222222222 8 1 0 8 3L:21530165-21530195 8 Mkrn1 FBtr0078383 21529957 21531468 TGATATTT 8mer-m1 dme-miR-283-5p 3L - 21530160 21530195 3'utr Mkrn1 FlyBase G29460.1 ATAGCTAAACCTATCCAGAAGTGATATTTTTCTTTG 5 21530169 0.972516132 3 5 41 1 0.84509804 0 0.4 0.571428571 5 0 0 7 3L:21530160-21530195 8 6 2097 FBgn0029152 1179.853333 63.02 97.17333333 0.005085378 0.095207871 0.061745335 -5 -5 -5 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3L 21530510 21530516 - 3L_21530510_21530516_- 0.429693976 0.422755736 0.426224856 0.004906119 Mkrn1 FBtr0078383 21529957 21531468 3L - 21530499 21530583 3'utr Mkrn1 FlyBase G39018.1 TGTAACAATAACTTAAAAATCTCAATAATTGCATAGAATCGGGTTCAGCGATTCGAACCCATTTGTATGTGATTCTAGTTGACAA 26 21530521 0.714901183 9 19 204 0.7 0.84509804 0.033333333 0.153846154 0.266666667 26 7 2 21 3L:21530499-21530583 7 Mkrn1 FBtr0078383 21529957 21531468 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 21530491 21530533 3'utr Mkrn1 FlyBase G29462.1 ATTCGAACCCATTTGTATGTGATTCTAGTTGACAAACAAAATA 6 21530512 0.987489023 4 5 49 1 1 0.4 0.8 0.9 5 0 0 10 3L:21530491-21530533 7 6.5 2098 FBgn0029152 1179.853333 63.02 97.17333333 0.005509159 0.10314186 0.066890779 5 -4 0.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 21530710 21530715 - 3L_21530710_21530715_- 0.999048975 0.993208843 0.996128909 0.004129645 Mkrn1 FBtr0305331|FBtr0078384|FBtr0078383 21530604|21530604|21529957 21531468|21531468|21531468 3L - 21530692 21530779 3'utr Mkrn1 FlyBase G39020.1 ACTGCAAATATGATATGTATAACATCTTTACTGTATATGAATTTTAAGTTTATACTTTCGAAATGTACCTCTTTAAAATGTTTTATTT 99 21530716 0.836772961 11 99 897 1 2.11058971 0.015503876 0.212121212 0.395348837 99 0 0 129 3L:21530692-21530779 6 Mkrn1 FBtr0078383|FBtr0078384|FBtr0305331 21529957|21530604|21530604 21531468|21531468|21531468 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L - 21530690 21530764 3'utr Mkrn1 FlyBase G29464.1 TGTATAACATCTTTACTGTATATGAATTTTAAGTTTATACTTTCGAAATGTACCTCTTTAAAATGTTTTATTTTT 53 21530716 0.859013843 7 53 493 1 1.886490725 0 0.358490566 0.558441558 53 0 0 77 3L:21530690-21530764 6 68 2099 FBgn0029152 1179.853333 63.02 97.17333333 0.057634282 1.079022533 0.699780461 1 1 1 0.15 dme-miR-14-3p 7mer-A1 AGACTGA 3L 21531075 21531081 - 3L_21531075_21531081_- 0.823313711 0.823286691 0.823300201 1.91E-05 Mkrn1 FBtr0305331|FBtr0078384|FBtr0078383 21530604|21530604|21529957 21531468|21531468|21531468 3L - 21531056 21531116 3'utr Mkrn1 FlyBase G39021.1 ATTTTCAAAACTGGTGACTGTAAATTATGGCTTTCAGACTGAATTGTAAAGATAAAAATGC 102 21531084 0.707398048 9 99 751 0.976 1.785329835 0.04 0.18627451 0.336 102 2 1 122 3L:21531056-21531116 7 Mkrn1 FBtr0078383|FBtr0078384|FBtr0305331 21529957|21530604|21530604 21531468|21531468|21531468 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 21531059 21531110 3'utr Mkrn1 FlyBase G29466.1 AAAACTGGTGACTGTAAATTATGGCTTTCAGACTGAATTGTAAAGATAAAAA 87 21531084 0.636788534 11 84 633 0.947826087 1.736396502 0.07826087 0.252873563 0.434782609 87 5 1 109 3L:21531059-21531110 7 89 2100 FBgn0029152 1179.853333 63.02 97.17333333 0.075433105 1.412250079 0.915889133 3 3 3 0.15 dme-miR-2b-2-5p 6mer2-7 TGAAGA 3L 21540649 21540654 + 3L_21540649_21540654_+ 1 0.999345563 0.999672781 0.000462731 VhaM9.7-b FBtr0078369|FBtr0333454 21540394|21540394 21540698|21541215 3L + 21540633 21540664 3'utr VhaM9.7-b FlyBase G32143.1 ATCGAGTGTCTTAAAATGAAGATTGAAACCTA 5 21540643 0.634010009 4 4 33 0.8 0.602059991 0.2 0 0 5 1 0 4 3L:21540633-21540664 6 VhaM9.7-b FBtr0333454|FBtr0078369 21540394|21540394 21541215|21540698 TGAAGA 6mer2-7 dme-miR-2b-2-5p 3L + 21540636 21540670 3'utr VhaM9.7-b FlyBase G24306.1 GAGTGTCTTAAAATGAAGATTGAAACCTAAAATAA 5 21540649 0.821549564 2 4 31 0.8 0.602059991 0 0 0 5 1 0 4 3L:21540636-21540670 6 5 2101 FBgn0028663 439.5 80.42 122.6266667 0.011376564 0.062173589 0.040774165 6 0 3 0.15 dme-miR-33-5p 7mer-A1 AATGCAA 3L 21630777 21630783 - 3L_21630777_21630783_- 0.782749458 0.680115586 0.731432522 0.072573127 MED1 FBtr0302592 21630119 21630911 3L - 21630732 21630784 3'utr MED1 FlyBase G39065.1 TAATGCAAATGCTGTATTTACTTTAGCTATAAAACGATTTGTAATTTGCCTAC 8 21630763 0.991342102 5 7 67 0.875 0.84509804 0.125 0 0 8 1 0 7 3L:21630732-21630784 7 MED1 FBtr0302592 21630119 21630911 AATGCAA 7mer-A1 dme-miR-33-5p 3L - 21630751 21630799 3'utr MED1 FlyBase G29503.1 AACCTATCTTTAAACTAATGCAAATGCTGTATTTACTTTAGCTATAAAA 9 21630775 0.872472412 4 9 86 1 1.113943352 0 0.444444444 0.615384615 9 0 0 13 3L:21630751-21630799 7 6.5 2102 FBgn0037109 608.09 15.64333333 23.92 0.010689207 0.415512465 0.27173913 -20 -8 -14 0.15 dme-miR-11-3p 8mer-m1 CTGTGATG 3L 216363 216370 + 3L_216363_216370_+ 0.462260042 0.462203185 0.462231613 4.02E-05 CG16940 FBtr0072486|FBtr0072487 216108|216108 216479|216479 3L + 216317 216385 3'utr CG16940 FlyBase G26717.1 TGAACCACATTGTGGGTCCGAGCTTTATGCTTGACAAAAATTGACTCTGTGATGCTTCCTTTTTCGGTT 25 216362 0.890948911 9 21 195 0.903225806 1.447158031 0.129032258 0.24 0.387096774 25 3 0 28 3L:216317-216385 8 CG16940 FBtr0072487|FBtr0072486 216108|216108 216479|216479 CTGTGATG 8mer-m1 dme-miR-11-3p 3L + 216320 216391 3'utr CG16940 FlyBase G20203.1 ACCACATTGTGGGTCCGAGCTTTATGCTTGACAAAAATTGACTCTGTGATGCTTCCTTTTTCGGTTTGCATA 28 216361 0.968264553 12 27 221 1 1.591064607 0.102564103 0.333333333 0.538461538 27 0 0 39 3L:216320-216391 8 21 2103 FBgn0035111 907.85 30.83666667 47.24666667 0.023131575 0.681007459 0.444475801 1 2 1.5 0.15 dme-miR-283-5p 7mer-m8 TGATATT 3L 21642236 21642242 + 3L_21642236_21642242_+ 0.620199199 0.620203087 0.620201143 2.76E-06 Atox1 FBtr0330117|FBtr0078426 21642160|21642106 21642599|21642599 3L + 21642193 21642282 3'utr Atox1 FlyBase G32188.1 CACGTTGCCGCTCCGAAAGCATTCGATTTGGGTCGCTGTTCAGTGATATTCATGGGATACATACAAATTTTACTCTTAACCAAATCAAAT 61 21642232 0.680270866 17 56 502 0.918918919 1.531478917 0.175675676 0.180327869 0.324324324 61 5 1 68 3L:21642193-21642282 7 Atox1 FBtr0078426|FBtr0330117 21642106|21642160 21642599|21642599 TGATATT 7mer-m8 dme-miR-283-5p 3L + 21642198 21642274 3'utr Atox1 FlyBase G24336.1 TGCCGCTCCGAAAGCATTCGATTTGGGTCGCTGTTCAGTGATATTCATGGGATACATACAAATTTTACTCTTAACCA 55 21642232 0.988571323 10 50 457 0.903614458 1.273001272 0.120481928 0.363636364 0.578313253 55 5 3 75 3L:21642198-21642274 7 45.5 2104 FBgn0052446 139.3333333 19.38666667 29.60666667 0.326555024 2.346973865 1.536816032 4 4 4 0.15 dme-miR-970-3p 8mer-A1 TCTTATGA 3L 21642527 21642534 + 3L_21642527_21642534_+ 0.390914668 0.387814344 0.389364506 0.002192314 Atox1 FBtr0330117|FBtr0078426 21642160|21642106 21642599|21642599 3L + 21642485 21642542 3'utr Atox1 FlyBase G32190.1 AATCCAACGTAGTTGCCAATAAATGATATACGCCAGTTGCCCTCTTATGACTAATCGT 12 21642522 0.990173395 4 9 88 0.6875 0.740362689 0.125 0.25 0.4375 12 4 1 11 3L:21642485-21642542 8 Atox1 FBtr0078426|FBtr0330117 21642106|21642160 21642599|21642599 TCTTATGA 8mer-A1 dme-miR-970-3p 3L + 21642496 21642552 3'utr Atox1 FlyBase G24338.1 GTTGCCAATAAATGATATACGCCAGTTGCCCTCTTATGACTAATCGTAATATTACAA 12 21642522 0.98295292 5 10 83 0.904761905 1.278753601 0.285714286 0.583333333 0.761904762 12 2 0 19 3L:21642496-21642552 8 11 2105 FBgn0052446 139.3333333 19.38666667 29.60666667 0.078947368 0.567400275 0.371537942 5 5 5 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 21683107 21683113 + 3L_21683107_21683113_+ 0.661387365 0.661452075 0.66141972 4.57E-05 CG11248 FBtr0078430|FBtr0333967|FBtr0078431 21682915|21682915|21682915 21683231|21683231|21683231 3L + 21683060 21683127 3'utr CG11248 FlyBase G32194.1 AGATCCAACTTAGTTCAATTTATATAAATATTTATTTTGTTGTCTTTTGTGTTCGTTATCTTTATTTA 19 21683106 0.879119069 2 19 281 1 1.380211242 0 0.157894737 0.333333333 19 0 0 24 3L:21683060-21683127 7 CG11248 FBtr0078431|FBtr0333967|FBtr0078430 21682915|21682915|21682915 21683231|21683231|21683231 TGTGTTC 7mer-m8 dme-miR-317-3p 3L + 21683093 21683126 3'utr CG11248 FlyBase G24341.1 ATTTTGTTGTCTTTTGTGTTCGTTATCTTTATTT 11 21683106 0.729967988 2 11 156 1 1.204119983 0 0.272727273 0.5 11 0 0 16 3L:21683093-21683126 7 13.5 2106 FBgn0037117 323.0366667 13.05333333 20.00333333 0.041790922 1.03421859 0.674887519 1 1 1 0.15 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA 3L 21724674 21724681 - 3L_21724674_21724681_- 0.626974776 0.607675577 0.617325176 0.013646595 CG11247 FBtr0113184|FBtr0078459|FBtr0078458|FBtr0332769 21724324|21724324|21724324|21724324 21724898|21724898|21724898|21724898 3L - 21724656 21724712 3'utr CG11247 FlyBase G39103.1 TCCCAATTTTGCTGCTACCAAAAAGTATAATTTGAAGAATGTATGAGTTAGTGTTGT 8 21724682 0.977485402 7 8 54 1 1 0.1 0.125 0.3 8 0 0 10 3L:21724656-21724712 8 CG11247 FBtr0332769|FBtr0078458|FBtr0078459|FBtr0113184 21724324|21724324|21724324|21724324 21724898|21724898|21724898|21724898 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p 3L - 21724659 21724721 3'utr CG11247 FlyBase G29527.1 TACCCTTAATCCCAATTTTGCTGCTACCAAAAAGTATAATTTGAAGAATGTATGAGTTAGTGT 7 21724704 0.96920563 4 7 48 1 1.041392685 0.272727273 0.285714286 0.545454545 7 0 0 11 3L:21724659-21724721 8 3 2107 FBgn0037120 533.7966667 23.84666667 36.66 0.005620118 0.125803746 0.081833061 1 23 12 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 21824146 21824151 + 3L_21824146_21824151_+ 0.953123234 0.92726623 0.940194732 0.01828366 CG7407 FBtr0078440|FBtr0078440|FBtr0078440 21824099|21824099|21824099 21824571|21824571|21824571 3L + 21824034 21824244 stop_codon CG7407 FlyBase G32205.1 GGAATTGAACCTCCAGGACCGAATAAGCGACCAGGATCTCAAGCAGCAGGTGCGGCTCTATCGCTGAAGTGGCGCCGAGCCTGGGCTCACCCTACCTGAATGTACAGACTTGTGTGATCTATTAGTTTAATGTTTAAAATTCCAAGATTTGGTGTTGCCTCATACGGTCCACTAAGTGCGGGCAAGTCTTTAGTCAGAGAGCTATCTCATC 258 21824145 0.999997264 26 248 2332 0.963815789 1.767897616 0.217105263 0.158914729 0.286184211 258 7 4 293 3L:21824034-21824244 6 CG7407 FBtr0078440|FBtr0078440|FBtr0078440 21824099|21824099|21824099 21824571|21824571|21824571 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 21824037 21824169 stop_codon CG7407 FlyBase G24348.1 ATTGAACCTCCAGGACCGAATAAGCGACCAGGATCTCAAGCAGCAGGTGCGGCTCTATCGCTGAAGTGGCGCCGAGCCTGGGCTCACCCTACCTGAATGTACAGACTTGTGTGATCTATTAGTTTAATGTTTA 129 21824145 0.988546648 16 121 1145 0.938547486 1.924279286 0.173184358 0.286821705 0.48603352 129 10 1 168 3L:21824037-21824169 6 139.5 2108 FBgn0037134 80.66666667 9.62 14.74333333 1.729338843 14.5010395 9.461903685 1 1 1 0.15 dme-miR-263a-5p 7mer-m1 TGCCATT 3L 21827008 21827014 + 3L_21827008_21827014_+ 0.765561565 0.765586663 0.765574114 1.77E-05 CG7414 FBtr0303247|FBtr0303245 21826936|21826936 21827856|21827856 3L + 21826956 21827031 3'utr CG7414 FlyBase G32220.1 TTGTCAGCTCCTAGGCTCCACTCACCTCTTTCACACACATTTTGTATTAGCATGCCATTAGGATTAGGGATTGCGC 23 21827013 0.985561845 11 21 171 0.923076923 1.079181246 0.192307692 0.086956522 0.192307692 23 1 1 24 3L:21826956-21827031 7 CG7414 FBtr0303247|FBtr0303245 21826936|21826936 21827856|21827856 TGCCATT 7mer-m1 dme-miR-263a-5p 3L + 21826983 21827025 3'utr CG7414 FlyBase G24361.1 CTTTCACACACATTTTGTATTAGCATGCCATTAGGATTAGGGA 7 21827007 0.981728126 5 6 46 0.9 0.954242509 0.1 0.285714286 0.5 7 1 0 9 3L:21826983-21827025 7 14 2109 FBgn0037135 1558.176667 79.32666667 121.5733333 0.008984861 0.176485419 0.115156833 -5 1 -2 0.15 dme-miR-184-5p 7mer-m1 GATAAGG 3L 21827363 21827369 + 3L_21827363_21827369_+ 0.514538543 0.825568174 0.670053358 0.21993121 CG7414 FBtr0303247|FBtr0303245 21826936|21826936 21827856|21827856 3L + 21827330 21827375 3'utr CG7414 FlyBase G32223.1 GGACAGGGTCATCCCAATGGCCAGCACATCAGCGATAAGGAGCGCA 10 21827358 0.98729041 2 10 21 1 1.041392685 0.272727273 0.1 0.181818182 10 0 0 11 3L:21827330-21827375 7 CG7414 FBtr0303247|FBtr0303245 21826936|21826936 21827856|21827856 GATAAGG 7mer-m1 dme-miR-184-5p 3L + 21827301 21827384 3'utr CG7414 FlyBase G24363.1 ACGCTGCCGATCAGCCACCGAATTCGTATGGACAGGGTCATCCCAATGGCCAGCACATCAGCGATAAGGAGCGCAAGATTCGCA 8 21827358 0.89211106 4 8 27 1 1.176091259 0.333333333 0.75 0.866666667 8 0 0 15 3L:21827301-21827384 7 6.5 2110 FBgn0037135 1558.176667 79.32666667 121.5733333 0.004171542 0.081939659 0.053465672 5 5 5 0.15 dme-miR-2a-2-5p 6mer2-7 GATGAG 3L 21827495 21827500 + 3L_21827495_21827500_+ 0.66774506 0.782904997 0.725325028 0.081430346 CG7414 FBtr0303247|FBtr0303245 21826936|21826936 21827856|21827856 3L + 21827432 21827546 3'utr CG7414 FlyBase G32224.1 AGCCAGGGCGAGAATCTGGAGCTGAACCAACTGAACAAGATTAAGATGGAAGCACAGTACCTGGATGAGCTCAAGGCTCTCAAGCAGTCTGCCTAGGAGGACGTTAATGGCGTTG 30 21827497 0.942392626 9 26 113 0.891891892 1.217483944 0.324324324 0.2 0.351351351 30 3 1 33 3L:21827432-21827546 6 CG7414 FBtr0303247|FBtr0303245 21826936|21826936 21827856|21827856 GATGAG 6mer2-7 dme-miR-2a-2-5p 3L + 21827436 21827509 3'utr CG7414 FlyBase G24364.1 AGGGCGAGAATCTGGAGCTGAACCAACTGAACAAGATTAAGATGGAAGCACAGTACCTGGATGAGCTCAAGGCT 23 21827497 0.782753911 6 21 69 0.921052632 1.544068044 0.052631579 0.434782609 0.657894737 23 3 0 35 3L:21827436-21827509 6 12 2111 FBgn0037135 1558.176667 79.32666667 121.5733333 0.007701309 0.151273216 0.098705857 -2 -2 -2 0.15 dme-miR-965-3p 6mer3-8 TACGCT 3L 21827674 21827679 + 3L_21827674_21827679_+ 0.996972316 0.999962454 0.998467385 0.002114391 CG7414 FBtr0303247|FBtr0303245|FBtr0078441|FBtr0303246 21826936|21826936|21827526|21827526 21827856|21827856|21827856|21827856 3L + 21827643 21827691 3'utr CG7414 FlyBase G32226.1 TCACCTCCTGTTCGTCCCCTTCCTGCTGTTTTACGCTCAGTTTGTGGCC 15 21827673 0.736859488 6 12 143 0.85 1.230448921 0.05 0.333333333 0.5 15 3 0 17 3L:21827643-21827691 6 CG7414 FBtr0078441|FBtr0303246|FBtr0303247|FBtr0303245 21827526|21827526|21826936|21826936 21827856|21827856|21827856|21827856 TACGCT 6mer3-8 dme-miR-965-3p 3L + 21827643 21827692 3'utr CG7414 FlyBase G24366.1 TCACCTCCTGTTCGTCCCCTTCCTGCTGTTTTACGCTCAGTTTGTGGCCC 9 21827673 0.722351232 5 8 69 1 1.113943352 0.153846154 0.333333333 0.538461538 9 0 0 13 3L:21827643-21827692 6 8 2112 FBgn0037135 1558.176667 79.32666667 121.5733333 0.005134206 0.100848811 0.065803904 1 1 1 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3L 21827734 21827740 + 3L_21827734_21827740_+ 0.521217394 0.52122257 0.521219982 3.68E-06 CG7414 FBtr0303247|FBtr0303245|FBtr0078441|FBtr0303246 21826936|21826936|21827526|21827526 21827856|21827856|21827856|21827856 3L + 21827711 21827764 3'utr CG7414 FlyBase G32227.1 AAGTTAAAACATTTTTCTACTATTGTGATTTCCCAACTAATTTCGGCAAAACGT 194 21827740 0.734981933 9 190 1861 0.984 2.089905111 0.004 0.25257732 0.42 194 3 1 246 3L:21827711-21827764 7 CG7414 FBtr0078441|FBtr0303246|FBtr0303247|FBtr0303245 21827526|21827526|21826936|21826936 21827856|21827856|21827856|21827856 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 21827712 21827777 3'utr CG7414 FlyBase G24367.1 AGTTAAAACATTTTTCTACTATTGTGATTTCCCAACTAATTTCGGCAAAACGTACAGTAACTCCCG 138 21827740 0.729529215 8 131 1324 0.955 1.37794338 0.015 0.362318841 0.56 138 2 7 191 3L:21827712-21827777 7 163.5 2113 FBgn0037135 1558.176667 79.32666667 121.5733333 0.104930335 2.061097571 1.344867295 -6 -6 -6 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3L 21837137 21837143 - 3L_21837137_21837143_- 0.435599021 0.402289833 0.418944427 0.023553161 P5CDh1 FBtr0332813|FBtr0303031|FBtr0078446|FBtr0078447|FBtr0078445 21836663|21836663|21836663|21836663|21836663 21837488|21837488|21837488|21837488|21837488 3L - 21837121 21837223 3'utr P5CDh1 FlyBase G39122.1 CTTCGAACTACAAACACACCATGACATGGATATTTTAAATGAATACTATGTAATATCATTATTTTACGATTTAAACGCAATGTGATTATTTAATTATATATGA 47 21837135 0.988599795 15 45 419 0.964912281 1.263241435 0.280701754 0.191489362 0.333333333 47 0 2 55 3L:21837121-21837223 7 P5CDh1 FBtr0078445|FBtr0078446|FBtr0078447|FBtr0332813|FBtr0303031 21836663|21836663|21836663|21836663|21836663 21837488|21837488|21837488|21837488|21837488 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 21837092 21837156 3'utr P5CDh1 FlyBase G29542.1 GATTTAAACGCAATGTGATTATTTAATTATATATGATTTATAATTAAATGGCCCGCCTTATGTTT 23 21837135 0.992063414 8 21 233 0.903225806 1.146128036 0.258064516 0.304347826 0.483870968 23 2 1 28 3L:21837092-21837156 7 31 2114 FBgn0037138 509.79 22.77333333 34.87 0.060809353 1.361241218 0.889016346 -8 -8 -8 0.15 dme-miR-968-5p 6mer3-8 ACTACT 3L 21837410 21837415 - 3L_21837410_21837415_- 0.992714797 0.999999964 0.99635738 0.005151414 P5CDh1 FBtr0332813|FBtr0303031|FBtr0078446|FBtr0078447|FBtr0078445 21836663|21836663|21836663|21836663|21836663 21837488|21837488|21837488|21837488|21837488 3L - 21837410 21837506 stop_codon P5CDh1 FlyBase G39124.1 CCATACATGTGCGAGTAAGCTGGCCGACAGAAGATGCGCAAGGGGAATGGGATGAGCAAAAGTAGTGAAAACCAGACAGGAATCTCATATAACTACT 19 21837419 0.917950468 7 16 58 0.863636364 1.278753601 0.181818182 0.105263158 0.227272727 19 3 0 19 3L:21837410-21837506 5 P5CDh1 FBtr0078445|FBtr0078446|FBtr0078447|FBtr0332813|FBtr0303031 21836663|21836663|21836663|21836663|21836663 21837488|21837488|21837488|21837488|21837488 ACTACT 6mer3-8 dme-miR-968-5p 3L - 21837390 21837471 3'utr P5CDh1 FlyBase G29544.1 GCGCAAGGGGAATGGGATGAGCAAAAGTAGTGAAAACCAGACAGGAATCTCATATAACTACTAACTATATAAACATACTTAA 9 21837418 0.937811203 7 8 30 1 1.113943352 0.307692308 0.333333333 0.538461538 9 0 0 13 3L:21837390-21837471 6 4 2115 FBgn0037138 509.79 22.77333333 34.87 0.007846368 0.175644028 0.114711787 4 3 3.5 0.15 dme-miR-965-3p 6mer2-7 ACGCTT 3L 2189274 2189279 - 3L_2189274_2189279_- 0.893569896 0.99999926 0.946784578 0.07525695 CG5707 FBtr0308230|FBtr0308231|FBtr0072912 2189158|2189158|2189158 2189387|2189387|2189387 3L - 2189265 2189359 3'utr CG5707 FlyBase G33645.1 AGCAGCGCGATGCGAAAATTTCCGATGCGAAACAAGATATTGATTTCATTATGCCGACGTGATGCTTTCTTCAAGCCTTAACGCTTTAGAGTAAT 38 2189293 0.836572325 12 36 296 0.9375 1.653212514 0.208333333 0.236842105 0.395833333 38 3 0 45 3L:2189265-2189359 6 CG5707 FBtr0072912|FBtr0308230|FBtr0308231 2189158|2189158|2189158 2189387|2189387|2189387 ACGCTT 6mer2-7 dme-miR-965-3p 3L - 2189248 2189328 3'utr CG5707 FlyBase G25441.1 ACAAGATATTGATTTCATTATGCCGACGTGATGCTTTCTTCAAGCCTTAACGCTTTAGAGTAATAATATAGACAATTTTAT 23 2189298 0.986701432 10 22 190 0.923076923 1.380211242 0.115384615 0.130434783 0.230769231 23 2 0 24 3L:2189248-2189328 6 4 2116 FBgn0026593 25 2.016666667 3.073333333 0.16 1.983471074 1.301518438 14 19 16.5 0.15 dme-miR-970-3p 6mer2-7 CTTATG 3L 21923326 21923331 + 3L_21923326_21923331_+ 0.712422705 0.707103882 0.709763293 0.00376096 mub FBtr0301364|FBtr0111017|FBtr0304983|FBtr0304980|FBtr0304984 21923187|21923187|21923187|21923187|21923187 21924114|21932702|21924114|21924114|21924114 3L + 21923306 21923341 3'utr mub FlyBase G32252.1 TGTATAAAATTCGCTTTAAACTTATGTGGTATGCAT 6 21923328 0.9841719 2 6 45 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3L:21923306-21923341 6 mub FBtr0304980|FBtr0304984|FBtr0111017|FBtr0304983|FBtr0301364 21923187|21923187|21923187|21923187|21923187 21924114|21924114|21932702|21924114|21924114 CTTATG 6mer2-7 dme-miR-970-3p 3L + 21923306 21923356 3'utr mub FlyBase G24383.1 TGTATAAAATTCGCTTTAAACTTATGTGGTATGCATACAATTTGCAAACGT 7 21923328 0.990100258 2 6 59 0.857142857 1.079181246 0.071428571 0.428571429 0.714285714 7 2 0 12 3L:21923306-21923356 6 6.5 2117 FBgn0262737 2368.09 79.81333333 123.0033333 0.002744828 0.081440027 0.052844096 -2 -2 -2 0.15 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 21923529 21923536 + 3L_21923529_21923536_+ 0.647704618 0.651131758 0.649418188 0.002423396 mub FBtr0301364|FBtr0111017|FBtr0304983|FBtr0304980|FBtr0304984 21923187|21923187|21923187|21923187|21923187 21924114|21932702|21924114|21924114|21924114 3L + 21923504 21923546 3'utr mub FlyBase G32253.1 AGTCACACTTAGATTAGCCGCATAGGGCAGCTAGAGATTTGAA 44 21923526 0.970701398 3 42 174 0.92 1.662757832 0.44 0.113636364 0.22 44 4 0 46 3L:21923504-21923546 8 mub FBtr0304980|FBtr0304984|FBtr0111017|FBtr0304983|FBtr0301364 21923187|21923187|21923187|21923187|21923187 21924114|21924114|21932702|21924114|21924114 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L + 21923510 21923548 3'utr mub FlyBase G24384.1 ACTTAGATTAGCCGCATAGGGCAGCTAGAGATTTGAATA 19 21923526 0.962822412 3 18 82 1 1.505149978 0.375 0.368421053 0.625 19 0 0 32 3L:21923510-21923548 8 31 2118 FBgn0262737 2368.09 79.81333333 123.0033333 0.013090719 0.388406281 0.25202569 3 3 3 0.15 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 3L 21923940 21923945 + 3L_21923940_21923945_+ 0.799190598 0.705452328 0.752321463 0.066282988 mub FBtr0301364|FBtr0301364|FBtr0111017|FBtr0111017|FBtr0304983|FBtr0304983|FBtr0304980|FBtr0304980|FBtr0304984|FBtr0304984 21923187|21923187|21923187|21923187|21923187|21923187|21923187|21923187|21923187|21923187 21924114|21924114|21932702|21932702|21924114|21924114|21924114|21924114|21924114|21924114 3L + 21923941 21923980 3'utr mub FlyBase G32254.1 ACTTATAATCAATTGTACTCTCTTAGATAGTAAGCACTAA 39 21923963 0.627941341 6 35 330 0.916666667 1.643452676 0.041666667 0.205128205 0.354166667 39 4 0 44 3L:21923941-21923980 4 mub FBtr0304980|FBtr0304980|FBtr0304984|FBtr0304984|FBtr0111017|FBtr0111017|FBtr0304983|FBtr0304983|FBtr0301364|FBtr0301364 21923187|21923187|21923187|21923187|21923187|21923187|21923187|21923187|21923187|21923187 21924114|21924114|21924114|21924114|21932702|21932702|21924114|21924114|21924114|21924114 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 3L + 21923943 21923979 3'utr mub FlyBase G24385.1 TTATAATCAATTGTACTCTCTTAGATAGTAAGCACTA 20 21923963 0.614865365 5 19 170 0.96875 1.491361694 0.03125 0.3 0.5625 20 1 0 31 3L:21923943-21923979 2 5.5 2119 FBgn0262737 2368.09 79.81333333 123.0033333 0.002322547 0.068910792 0.044714235 -23 -23 -23 0.15 dme-miR-14-3p 7mer-A1 AGACTGA 3L 21926166 21926172 + 3L_21926166_21926172_+ 0.821105845 0.8225819 0.821843873 0.00104376 mub FBtr0346820|FBtr0078468|FBtr0333222|FBtr0332736|FBtr0304981|FBtr0304982|FBtr0078470|FBtr0111017 21925263|21925263|21925263|21925263|21925263|21925263|21925263|21923187 21932702|21926699|21932702|21926225|21926699|21926699|21932702|21932702 3L + 21926125 21926199 3'utr mub FlyBase G32257.1 AATTGTTATCGAAATTGTATTTGTGATTTTTGAATATGTTTAGACTGATGTGCAAAATTGATTCTGTTTATTAAT 74 21926164 0.72437265 13 73 763 0.99 1.995635195 0.45 0.297297297 0.48 74 1 0 99 3L:21926125-21926199 7 mub FBtr0111017|FBtr0304982|FBtr0346820|FBtr0304981|FBtr0078468|FBtr0078470|FBtr0333222|FBtr0332736 21923187|21925263|21925263|21925263|21925263|21925263|21925263|21925263 21932702|21926699|21932702|21926699|21926699|21932702|21932702|21926225 AGACTGA 7mer-A1 dme-miR-14-3p 3L + 21926127 21926200 3'utr mub FlyBase G24387.1 TTGTTATCGAAATTGTATTTGTGATTTTTGAATATGTTTAGACTGATGTGCAAAATTGATTCTGTTTATTAATT 58 21926164 0.720590759 13 53 594 0.884057971 1.785329835 0.608695652 0.189655172 0.31884058 58 8 0 61 3L:21926127-21926200 7 35.5 2120 FBgn0262737 2368.09 79.81333333 123.0033333 0.014990984 0.444787838 0.288610065 2 2 2 0.15 dme-miR-8-3p 6mer2-7 AGTATT 3L 21938973 21938978 - 3L_21938973_21938978_- 0.99981801 0.850647218 0.925232614 0.105479684 DNApol-eta FBtr0078489 21938632 21938999 3L - 21938926 21938993 3'utr DNApol-eta FlyBase G39135.1 CCTTACACCGCTCCAAGTATTTGAACCTGTATAAGTACCTACGAATGGACCACAGACAAATTTACTTC 17 21938973 0.971482558 7 17 96 1 1.278753601 0.105263158 0.117647059 0.210526316 17 0 0 19 3L:21938926-21938993 6 DNApol-eta FBtr0078489 21938632 21938999 AGTATT 6mer2-7 dme-miR-8-3p 3L - 21938938 21938992 3'utr DNApol-eta FlyBase G29554.1 CTTACACCGCTCCAAGTATTTGAACCTGTATAAGTACCTACGAATGGACCACAGA 10 21938973 0.980305413 5 9 60 0.916666667 1.041392685 0 0.2 0.333333333 10 1 0 11 3L:21938938-21938992 6 12.5 2121 FBgn0037141 470.7833333 18.66 28.63 0.026551492 0.669882101 0.43660496 -5 -5 -5 0.15 dme-miR-283-5p 8mer-A1 TGATATTA 3L 21949406 21949413 + 3L_21949406_21949413_+ 0.499778693 0.355500058 0.427639375 0.102020376 CG14562 FBtr0078472|FBtr0334088 21949341|21949341 21949452|21949866 3L + 21949388 21949421 3'utr CG14562 FlyBase G32275.1 ATTGAAAATTGATAAGATTGATATTAACGTAGCA 14 21949403 0.7541915 3 11 110 0.857142857 1.079181246 0.142857143 0 0 14 2 0 12 3L:21949388-21949421 8 CG14562 FBtr0334088|FBtr0078472 21949341|21949341 21949866|21949452 TGATATTA 8mer-A1 dme-miR-283-5p 3L + 21949388 21949421 3'utr CG14562 FlyBase G24399.1 ATTGAAAATTGATAAGATTGATATTAACGTAGCA 13 21949405 0.742074261 3 13 91 1 1.397940009 0.12 0.538461538 0.76 13 0 0 25 3L:21949388-21949421 8 13.5 2122 FBgn0037142 391.14 8.676666667 13.24 0.034514496 1.555897042 1.019637462 3 1 2 0.15 dme-miR-1007-3p 6mer3-8 TGAGCT 3L 21949569 21949574 + 3L_21949569_21949574_+ 0.956621639 0.636128519 0.796375079 0.226622844 CG14562 FBtr0334088 21949341 21949866 3L + 21949538 21949582 3'utr CG14562 FlyBase G32277.1 GAATACTCTAGCCTTCGGTGATTTATGAAACTGAGCTGACGAGGA 18 21949560 0.592015812 6 17 137 0.909090909 1.301029996 0.318181818 0.222222222 0.363636364 18 2 0 20 3L:21949538-21949582 6 CG14562 FBtr0334088 21949341 21949866 TGAGCT 6mer3-8 dme-miR-1007-3p 3L + 21949527 21949575 3'utr CG14562 FlyBase G24400.1 ACACAACATTCGAATACTCTAGCCTTCGGTGATTTATGAAACTGAGCTG 12 21949561 0.982631994 9 12 90 1 1.204119983 0.5625 0.25 0.4375 12 0 0 16 3L:21949527-21949575 6 5 2123 FBgn0037142 391.14 8.676666667 13.24 0.012783147 0.576258164 0.377643505 9 8 8.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 3L 22066799 22066805 + 3L_22066799_22066805_+ 0.821854406 0.821471061 0.821662733 0.000271034 CG14561 FBtr0078480|FBtr0334111 22066716|22066716 22066967|22067216 3L + 22066714 22066833 stop_codon CG14561 FlyBase G32292.1 CTAGTGACCGCAGTCCAGCCTTCCCAACCAAAGCCATGGAGCCCTCGCTCAGACTGCCATCGATGTTCTAGAATAAGTTACCATTTACCTGAATGTATTGTTCACACCCAGCGGTCAGCA 128 22066797 0.985488387 14 123 1012 0.96835443 1.582631439 0.46835443 0.1796875 0.335443038 128 2 3 153 3L:22066714-22066833 7 CG14561 FBtr0334111|FBtr0078480 22066716|22066716 22067216|22066967 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3L + 22066745 22066827 3'utr CG14561 FlyBase G24408.1 AGCCATGGAGCCCTCGCTCAGACTGCCATCGATGTTCTAGAATAAGTTACCATTTACCTGAATGTATTGTTCACACCCAGCGG 110 22066797 0.964249231 10 101 852 0.907407407 1.264227348 0.50617284 0.327272727 0.543209877 110 8 7 147 3L:22066745-22066827 7 108 2124 FBgn0037149 161.3333333 18.83333333 28.89 0.669421488 5.734513274 3.738317757 2 2 2 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 3L 22075151 22075156 - 3L_22075151_22075156_- 0.999999974 0.99977527 0.999887622 0.000158887 CG7130 FBtr0078484 22075054 22075247 3L - 22075117 22075220 3'utr CG7130 FlyBase G39167.1 AATCTCGGGTACCTAGCGTTCTTCGCTGAATAGTCTTTAAGATTAATTTATAGGAACTTAATTATTGACTGTTTATCTAATGAATCCTGCGTTACTTATTGATT 73 22075158 0.686629901 23 69 696 0.952941176 1.306425028 0.105882353 0.150684932 0.270588235 73 1 3 81 3L:22075117-22075220 6 CG7130 FBtr0078484 22075054 22075247 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 22075113 22075172 3'utr CG7130 FlyBase G29575.1 TATAGGAACTTAATTATTGACTGTTTATCTAATGAATCCTGCGTTACTTATTGATTAATT 50 22075157 0.710011617 13 49 471 0.959459459 1.851258349 0.094594595 0.38 0.581081081 50 3 0 71 3L:22075113-22075172 6 39 2125 FBgn0037151 176 32.25666667 49.12666667 0.221590909 1.209052392 0.793866196 2 1 1.5 0.15 dme-miR-92b-3p 7mer-A1 TGCAATA 3L 22257836 22257842 - 3L_22257836_22257842_- 0.782874511 0.782858651 0.782866581 1.12E-05 Rich FBtr0078512 22257747 22258138 3L - 22257823 22257902 3'utr Rich FlyBase G39171.1 AACCGTAAAACCGTATGAAGCATACGCAACGTAATCCATAATTTAGTAGATGAAATTTGCTGCAATATTTGTTAATTAAA 15 22257846 0.984044994 9 15 129 1 1.230448921 0.176470588 0.066666667 0.176470588 15 0 0 17 3L:22257823-22257902 7 Rich FBtr0078512 22257747 22258138 TGCAATA 7mer-A1 dme-miR-92b-3p 3L - 22257824 22257858 3'utr Rich FlyBase G29578.1 AGTAGATGAAATTTGCTGCAATATTTGTTAATTAA 6 22257846 0.786487377 3 6 57 1 1.113943352 0 0.5 0.769230769 6 0 0 13 3L:22257824-22257858 7 8 2126 FBgn0028500 540.74 13.42666667 20.61333333 0.014794541 0.595829196 0.388098318 4 4 4 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3L 22265808 22265814 - 3L_22265808_22265814_- 0.521218427 0.52114298 0.521180704 5.33E-05 CG11523 FBtr0078511 22265804 22266077 3L - 22265799 22265866 3'utr CG11523 FlyBase G39183.1 AAATGTCGCTCCAGATCCGCGTTAGACCTTAAGACGTTTCAAGAATAAAGATTGTGATTGCAACTCTA 173 22265815 0.650947509 11 163 988 0.947136564 1.55428721 0.061674009 0.231213873 0.414096916 173 7 5 215 3L:22265799-22265866 7 CG11523 FBtr0078511 22265804 22266077 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 22265799 22265880 3'utr CG11523 FlyBase G29587.1 CTTGCATAGCAAACAAATGTCGCTCCAGATCCGCGTTAGACCTTAAGACGTTTCAAGAATAAAGATTGTGATTGCAACTCTA 118 22265815 0.826435357 9 114 669 0.97826087 1.77815125 0.076086957 0.43220339 0.635869565 118 2 2 180 3L:22265799-22265880 7 139 2127 FBgn0037156 234.9133333 34.43333333 53.07666667 0.59170758 4.03678606 2.618853231 1 1 1 0.15 dme-miR-92b-3p 6mer3-8 GTGCAA 3L 22265904 22265909 + 3L_22265904_22265909_+ 0.885367114 0.883644545 0.884505829 0.001218062 Ddx1 FBtr0078492 22265844 22266017 3L + 22265848 22265940 3'utr Ddx1 FlyBase G32325.1 CGGATCTGGAGCGACATTTGTTTGCTATGCAAGGAAAGGATGTGGTGAATTGAGAAGTGCAAGACCAACTCACGCGGAAATACTTTTGCGGCA 43 22265905 0.988503108 4 42 230 0.97826087 1.653212514 0.304347826 0.069767442 0.130434783 43 1 0 45 3L:22265848-22265940 6 Ddx1 FBtr0078492 22265844 22266017 GTGCAA 6mer3-8 dme-miR-92b-3p 3L + 22265863 22265927 3'utr Ddx1 FlyBase G24432.1 ATTTGTTTGCTATGCAAGGAAAGGATGTGGTGAATTGAGAAGTGCAAGACCAACTCACGCGGAAA 19 22265905 0.995590542 3 19 90 1 1.531478917 0.176470588 0.526315789 0.735294118 19 0 0 34 3L:22265863-22265927 6 18 2128 FBgn0015075 283.7533333 13.87333333 21.15666667 0.063435378 1.297453148 0.850795651 -1 -1 -1 0.15 dme-miR-2535b-3p 7mer-m1 CGTGAGT 3L 22265915 22265921 - 3L_22265915_22265921_- 0.75082398 0.736607025 0.743715502 0.010052937 CG11523 FBtr0078511 22265804 22266077 3L - 22265875 22265997 3'utr CG11523 FlyBase G39184.1 ATTTTTAATAGCAGAGCTTGAGCTCCGACTTCCTACATATACAAAATTGTGTGTTTGTGCCGCAAAAGTATTTCCGCGTGAGTTGGTCTTGCACTTCTCAATTCACCACATCCTTTCCTTGCA 30 22265926 0.982738753 17 28 211 0.944444444 1.531478917 0.111111111 0.166666667 0.305555556 30 2 0 34 3L:22265875-22265997 7 CG11523 FBtr0078511 22265804 22266077 CGTGAGT 7mer-m1 dme-miR-2535b-3p 3L - 22265911 22265940 3'utr CG11523 FlyBase G29588.1 TGCCGCAAAAGTATTTCCGCGTGAGTTGGT 5 22265925 0.733806221 2 4 26 1 0.954242509 0.111111111 0.4 0.666666667 5 0 0 9 3L:22265911-22265940 7 7 2129 FBgn0037156 234.9133333 34.43333333 53.07666667 0.029798223 0.203291384 0.131884695 5 4 4.5 0.15 dme-miR-282-5p 6mer2-7 GAGGCT 3L 22266046 22266051 - 3L_22266046_22266051_- 0.783547818 0.526486058 0.655016938 0.181770071 CG11523 FBtr0078511 22265804 22266077 3L - 22266004 22266076 3'utr CG11523 FlyBase G39185.1 GGTAACCGGACTCCAGCTTTCAAACGAGGCTGTTTACTCTTTAGACAGACGATTTTAATGTTAGTTTAATTAA 23 22266043 0.684492009 11 23 169 1 1.462397998 0.24137931 0.260869565 0.413793103 23 0 0 29 3L:22266004-22266076 6 CG11523 FBtr0078511 22265804 22266077 GAGGCT 6mer2-7 dme-miR-282-5p 3L - 22266028 22266084 stop_codon CG11523 FlyBase G29589.1 GAAGTGACGGTAACCGGACTCCAGCTTTCAAACGAGGCTGTTTACTCTTTAGACAGA 13 22266043 0.923026395 7 12 84 0.9 1.255272505 0.15 0.384615385 0.6 13 2 0 18 3L:22266028-22266084 6 15 2130 FBgn0037156 234.9133333 34.43333333 53.07666667 0.063853336 0.435624395 0.282610061 -8 -8 -8 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3L 22272942 22272947 + 3L_22272942_22272947_+ 0.999119037 0.596118052 0.797618544 0.284964669 Csp FBtr0078493|FBtr0078495|FBtr0344983|FBtr0334747|FBtr0078494 22271769|22272390|22272390|22271769|22272390 22273745|22273745|22273298|22273745|22273298 3L + 22272895 22272965 3'utr Csp FlyBase G32338.1 TCGCGAAGAGAGGCACTGTAATTATATATATGTATATGATATGTGTATCTAGTTTGTGGCATTTGTGTCGT 10 22272948 0.991945728 6 10 110 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 3L:22272895-22272965 6 Csp FBtr0334747|FBtr0078494|FBtr0344983|FBtr0078493|FBtr0078495 22271769|22272390|22272390|22271769|22272390 22273745|22273298|22273298|22273745|22273745 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 22272924 22273015 3'utr Csp FlyBase G24440.1 ATGTATATGATATGTGTATCTAGTTTGTGGCATTTGTGTCGTCGCTTAGTCTAGCTAATTTGTTCTCGAGATCTCCTCTTCACCGATTGTTT 16 22272949 0.976955482 8 15 171 0.92 0.884606581 0.2 0.4375 0.64 16 0 2 23 3L:22272924-22273015 6 8.5 2131 FBgn0004179 1541.363333 81.29333333 124.7033333 0.005514599 0.104559619 0.068161771 -6 -7 -6.5 0.15 dme-bantam-3p 6mer3-8 TGATCT 3L 22293399 22293404 - 3L_22293399_22293404_- 0.988801116 0.997649566 0.993225341 0.006256834 Ten-m FBtr0078509 22293042 22295587 3L - 22293047 22293427 3'utr Ten-m FlyBase G39206.1 GGTCCTCTGTTCTTAAAATACTTTGATCTGTACATTTTCAGGATGGGGCAAAAGCTTAACCTACTTAATTAGTTGAGATCATGATTAGGCATATTAACTGACTAACGAAAAAGGCCAGTCCGTTAAGGCAGTTTGAGCATACATAAATTGCGAACAATAATTGTATTTAATGTACGAAATTGTCTTTAAAATATATGGATACCGAGAGAAGTGCAGAGGGTATAGGCTATAAATTACAAATCGAATGCAGACAACAAAGACAATTGTACACAAAGAAATAATTATGGCAAGCCGATATACATACATGATAAAACATCCATATAAATATATATAATAACTAATAATATTACGAGTAAAAAGCGATTTCAATAAAAATGAAAA 175 22293405 0.925795772 47 167 966 0.962264151 1.610660163 0.179245283 0.16 0.306603774 175 4 4 204 3L:22293047-22293427 6 Ten-m FBtr0078509 22293042 22295587 TGATCT 6mer3-8 dme-bantam-3p 3L - 22293285 22293485 3'utr Ten-m FlyBase G29611.1 AGATACCAAGCGGATGCCGTTGTCGAGCTCGACTGTGCTTCATCTCGTACATACCCCAGGTCCTCTGTTCTTAAAATACTTTGATCTGTACATTTTCAGGATGGGGCAAAAGCTTAACCTACTTAATTAGTTGAGATCATGATTAGGCATATTAACTGACTAACGAAAAAGGCCAGTCCGTTAAGGCAGTTTGAGCATACA 61 22293405 0.981324038 28 57 412 0.956043956 1.638489257 0.065934066 0.327868852 0.549450549 61 3 1 87 3L:22293285-22293485 6 22.5 2132 FBgn0004449 644.2766667 6.713333333 10.31666667 0.034922885 3.351539225 2.180936995 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 22294462 22294468 - 3L_22294462_22294468_- 0.570814618 0.552651182 0.5617329 0.012843463 Ten-m FBtr0306107|FBtr0306107|FBtr0306107|FBtr0330159|FBtr0330159|FBtr0330159|FBtr0078509|FBtr0078509|FBtr0078509 22293982|22293982|22293982|22293982|22293982|22293982|22293042|22293042|22293042 22295587|22295587|22295587|22295431|22295431|22295431|22295587|22295587|22295587 3L - 22294384 22295099 3'utr Ten-m FlyBase G39208.2 ACGGTGCGTATTATTTAGATTGGTCCATTAACCGATTTTGGTCGAGACAAGAGTGCATAGATCAAACCAATACGAACGGAATGATCTCGCTTGTTTCGGAAATTGGAGTTAGGACAAACACAGGCCAACAAGCCAGTTGCATTACGATGTCAAACGATGAGTATTACACAGCAAATTATGCATACGATAAGTACAGATGTTAAACTACGAAATGAATAAATGTAAAAAGATTAAAGTTCTGCATAGTAGCTCCCTAGTCTTTGGTCCAAACCTGGACTCTTTCCAACACAGCCCACTCTCAAATGGCAACAGAAATGTTGATCGCTGCTTAACCTACTTCTTCATAATTGCTCTGTGTATATACGAACGAATACTTTTCAAGCCTCCACTGACGAAAAAGCGCGTATCCTTTATCCTAACACTCATTTTAGCGAAATAGGTCTCTAAGCCGAATGCTCGAATTTAAATTTAATAGACGCGTCTACCTAATTTGGATAGCCAAGAATCAAAAGGAATTTTTATCAGTCCCCTTTCAATGCAATACAATACTCTAACGACTCTTTTCACTCATTTTATAATGTTAGCTGTTGAATTTATTCAAAGGAAAACGCATTAAAAACTTTTTACAAATTGTGATATATATTTCTAAACATTTCATTTGACAACTTGAAGTGTAGCGAAGAAAAACTCGAATTAACTCAAATCGAACCGAAAGT 1837 22294469 0.972993216 142 1734 16945 0.945722171 1.721958503 0.072217111 0.151333696 0.282888684 1837 80 38 2056 3L:22294384-22295099 7 Ten-m FBtr0078509|FBtr0078509|FBtr0078509|FBtr0330159|FBtr0330159|FBtr0330159|FBtr0306107|FBtr0306107|FBtr0306107 22293042|22293042|22293042|22293982|22293982|22293982|22293982|22293982|22293982 22295587|22295587|22295587|22295431|22295431|22295431|22295587|22295587|22295587 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 22294385 22294866 3'utr Ten-m FlyBase G29615.1 AAGTTCTGCATAGTAGCTCCCTAGTCTTTGGTCCAAACCTGGACTCTTTCCAACACAGCCCACTCTCAAATGGCAACAGAAATGTTGATCGCTGCTTAACCTACTTCTTCATAATTGCTCTGTGTATATACGAACGAATACTTTTCAAGCCTCCACTGACGAAAAAGCGCGTATCCTTTATCCTAACACTCATTTTAGCGAAATAGGTCTCTAAGCCGAATGCTCGAATTTAAATTTAATAGACGCGTCTACCTAATTTGGATAGCCAAGAATCAAAAGGAATTTTTATCAGTCCCCTTTCAATGCAATACAATACTCTAACGACTCTTTTCACTCATTTTATAATGTTAGCTGTTGAATTTATTCAAAGGAAAACGCATTAAAAACTTTTTACAAATTGTGATATATATTTCTAAACATTTCATTTGACAACTTGAAGTGTAGCGAAGAAAAACTCGAATTAACTCAAATCGAACCGAAAG 1034 22294469 0.971539297 102 973 9482 0.942743009 1.808640573 0.05792277 0.34622824 0.549933422 1034 65 21 1416 3L:22294385-22294866 7 817.5 2133 FBgn0004449 644.2766667 6.713333333 10.31666667 1.268864825 121.7725919 79.24071082 1 1 1 0.15 dme-miR-970-3p 7mer-m8 TCTTATG 3L 22295238 22295244 - 3L_22295238_22295244_- 0.658966423 0.658999209 0.658982816 2.32E-05 Ten-m FBtr0306107|FBtr0330159|FBtr0078509 22293982|22293982|22293042 22295587|22295431|22295587 3L - 22295192 22295351 3'utr Ten-m FlyBase G39210.1 AAAAACAAAGGAAAAGCAAGCATTGAACACACTAATTAATATAAACTTTAATCATGCTTAAAGTTTAGTATTAGCCACAACGCAACCCTCGAATAACCGAAGAAACTTCTTATGTGTACACTGGAACAGAAATATGTATGTTGATGTTGAGTTTAGGCGT 113 22295245 0.979799473 20 80 548 0.73015873 1.185636577 0.23015873 0.097345133 0.19047619 113 29 5 92 3L:22295192-22295351 7 Ten-m FBtr0078509|FBtr0330159|FBtr0306107 22293042|22293982|22293982 22295587|22295431|22295587 TCTTATG 7mer-m8 dme-miR-970-3p 3L - 22295047 22295302 3'utr Ten-m FlyBase G29618.1 AATCATGCTTAAAGTTTAGTATTAGCCACAACGCAACCCTCGAATAACCGAAGAAACTTCTTATGTGTACACTGGAACAGAAATATGTATGTTGATGTTGAGTTTAGGCGTATGTTTAGTCCATGTGTGTAATGTTAAATGTAATTTTTTAAATCAGAATCAGTGTCCCCACGGGCAATCAGCTTGCAATGGCATTTTACGCCACGGTGCGTATTATTTAGATTGGTCCATTAACCGATTTTGGTCGAGACAAGAG 82 22295244 0.973551237 36 75 469 0.893442623 1.736396502 0.114754098 0.317073171 0.540983607 82 12 1 109 3L:22295047-22295302 7 39 2134 FBgn0004449 644.2766667 6.713333333 10.31666667 0.060533001 5.809334657 3.780290792 1 0 0.5 0.15 dme-miR-13b-2-5p 7mer-A1 TTGACGA 3L 22295445 22295451 - 3L_22295445_22295451_- 0.780074819 0.781213051 0.780643935 0.0008049 Ten-m FBtr0306107|FBtr0078509 22293982|22293042 22295587|22295587 3L - 22295402 22295607 stop_codon Ten-m FlyBase G39211.1 TCGGCGAGCTGAGTGCGTGAGTGGAGGCATATAGAGAGAAGCTGGTGGCGGAGACGAAGCCAGAGGAGAGTGACATGACCGACGAAGAATACGGTGACCAGGAGGACTACCTAATTGCCGTGGGCAAAATGGAGCCAAGGGACAGCAGTGAGGCACTTGACGAGCAGATTTTGTAATTAGGTGAAATGCGCAACAGCGACCACAAG 157 22295459 0.912616298 27 153 495 0.968586387 2.267171728 0.298429319 0.159235669 0.308900524 157 6 0 185 3L:22295402-22295607 7 Ten-m FBtr0078509|FBtr0306107 22293042|22293982 22295587|22295587 TTGACGA 7mer-A1 dme-miR-13b-2-5p 3L - 22295406 22295604 stop_codon Ten-m FlyBase G29620.1 GCGAGCTGAGTGCGTGAGTGGAGGCATATAGAGAGAAGCTGGTGGCGGAGACGAAGCCAGAGGAGAGTGACATGACCGACGAAGAATACGGTGACCAGGAGGACTACCTAATTGCCGTGGGCAAAATGGAGCCAAGGGACAGCAGTGAGGCACTTGACGAGCAGATTTTGTAATTAGGTGAAATGCGCAACAGCGACCA 111 22295439 0.930338078 21 103 388 0.928571429 1.926856709 0.274725275 0.477477477 0.681318681 111 12 1 169 3L:22295406-22295604 7 56.5 2135 FBgn0004449 644.2766667 6.713333333 10.31666667 0.087695245 8.416087388 5.476575121 8 -12 -2 0.15 dme-miR-283-5p 8mer-m1 TGATATTT 3L 225558 225565 + 3L_225558_225565_+ 0.39456146 0.418295314 0.406428387 0.016782331 CG33229 FBtr0072499|FBtr0345592 224756|224756 225605|225605 3L + 225444 225577 3'utr CG33229 FlyBase G26725.1 ACGGTTCATATTGAATCACTAGCGCTAGAAAACGGGCAATATTGCAAAGTAAACGAGTGAAAGTCGAAAACCCAACTATTAACTGTAAATGTACTTAAAGTAAGCATACAGAACTGATATTTGATAAAACCTAA 296 225533 0.975595691 19 279 1766 0.940860215 2.06694679 0.129032258 0.202702703 0.365591398 296 20 2 350 3L:225444-225577 8 CG33229 FBtr0345592|FBtr0072499 224756|224756 225605|225605 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 225446 225582 3'utr CG33229 FlyBase G20211.1 GGTTCATATTGAATCACTAGCGCTAGAAAACGGGCAATATTGCAAAGTAAACGAGTGAAAGTCGAAAACCCAACTATTAACTGTAAATGTACTTAAAGTAAGCATACAGAACTGATATTTGATAAAACCTAAAATAA 212 225533 0.973680409 18 201 1220 0.942073171 1.790988475 0.057926829 0.386792453 0.603658537 212 15 4 309 3L:225446-225582 8 156 2136 FBgn0053229 390.9566667 32.02 49 0.399021204 4.871955028 3.183673469 25 25 25 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 2259195 2259201 - 3L_2259195_2259201_- 0.777450862 0.771746236 0.774598549 0.004033832 oxt FBtr0072904|FBtr0072904|FBtr0072904 2258837|2258837|2258837 2259328|2259328|2259328 3L - 2259133 2259220 3'utr oxt FlyBase G33658.1 ATGTTTTCGTATAGATTGTTGTGATAATGTGAACTTTTAAGCGCCATTTTGACCGGAAGCGGAACTCCGCCGCTCCAATTGTATTTGA 61 2259204 0.98681453 15 56 527 0.927536232 1.329058719 0.31884058 0.098360656 0.202898551 61 3 2 64 3L:2259133-2259220 7 oxt FBtr0072904|FBtr0072904|FBtr0072904 2258837|2258837|2258837 2259328|2259328|2259328 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 2259151 2259223 3'utr oxt FlyBase G25452.1 TCGATGTTTTCGTATAGATTGTTGTGATAATGTGAACTTTTAAGCGCCATTTTGACCGGAAGCGGAACTCCGC 30 2259204 0.987907542 10 28 248 0.93877551 1.662757832 0.346938776 0.4 0.632653061 30 3 0 46 3L:2259151-2259223 7 30 2137 FBgn0015360 414.5533333 14.81333333 22.68333333 0.072367046 2.02520252 1.322556943 3 3 3 0.15 dme-miR-12-5p 7mer-m8 AATACTC 3L 2259281 2259287 - 3L_2259281_2259287_- 0.673875347 0.673797098 0.673836223 5.53E-05 oxt FBtr0072904 2258837 2259328 3L - 2259255 2259296 3'utr oxt FlyBase G33659.1 TCTAGTGTAAATACTCGCCAAGATTTAGATGTCGAACCGCAA 10 2259285 0.966964605 2 10 57 1 1 0 0 0 10 0 0 10 3L:2259255-2259296 7 oxt FBtr0072904 2258837 2259328 AATACTC 7mer-m8 dme-miR-12-5p 3L - 2259248 2259295 3'utr oxt FlyBase G25453.1 CTAGTGTAAATACTCGCCAAGATTTAGATGTCGAACCGCAATTAACGA 16 2259285 0.958329289 2 15 73 1 1.380211242 0 0.25 0.5 16 0 0 24 3L:2259248-2259295 7 12.5 2138 FBgn0015360 414.5533333 14.81333333 22.68333333 0.030152936 0.843834383 0.551065393 -2 -2 -2 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 3L 22714513 22714519 - 3L_22714513_22714519_- 0.619729494 0.619727139 0.619728316 1.70E-06 ArfGAP3 FBtr0330174|FBtr0330173|FBtr0330175|FBtr0078540|FBtr0078539|FBtr0113186|FBtr0331775 22714406|22714406|22714406|22714406|22714311|22714406|22714406 22714943|22714943|22714943|22714943|22714943|22714943|22714943 3L - 22714491 22714529 3'utr ArfGAP3 FlyBase G39308.1 AATTACAATTTGCATTTCGGCTGGGCAGCTTTTAATTTT 5 22714520 0.983505365 2 5 39 1 0.84509804 0.142857143 0.2 0.428571429 5 0 0 7 3L:22714491-22714529 7 ArfGAP3 FBtr0078540|FBtr0330175|FBtr0330173|FBtr0330174|FBtr0331775|FBtr0113186|FBtr0078539 22714406|22714406|22714406|22714406|22714406|22714406|22714311 22714943|22714943|22714943|22714943|22714943|22714943|22714943 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 22714488 22714536 3'utr ArfGAP3 FlyBase G29691.1 GTTTTGAAATTACAATTTGCATTTCGGCTGGGCAGCTTTTAATTTTTTC 6 22714519 0.963016922 4 6 57 1 0.954242509 0.111111111 0.333333333 0.555555556 6 0 0 9 3L:22714488-22714536 7 4.5 2139 FBgn0037182 511.4866667 25.40666667 39.02333333 0.008797883 0.177118866 0.115315623 1 0 0.5 0.15 dme-miR-995-5p 7mer-A1 ATTCGGA 3L 22727375 22727381 - 3L_22727375_22727381_- 0.695758326 0.780051934 0.73790513 0.059604576 CG14450 FBtr0310503 22726232 22727477 3L - 22727328 22727396 3'utr CG14450 FlyBase G39328.1 CCTGTATGTGGAGGGATTCGGACTGAAGGTGACCACCAAGTTCTTTAAGAGTCTGCTTGCGCCGCCGAG 13 22727379 0.981958413 4 12 84 0.923076923 1.079181246 0.307692308 0 0 13 1 0 12 3L:22727328-22727396 7 CG14450 FBtr0310503 22726232 22727477 ATTCGGA 7mer-A1 dme-miR-995-5p 3L - 22727362 22727390 3'utr CG14450 FlyBase G29705.1 TGTGGAGGGATTCGGACTGAAGGTGACCA 5 22727380 0.721748275 3 4 19 0.875 0.84509804 0.625 0.4 0.625 5 1 0 7 3L:22727362-22727390 7 7.5 2140 FBgn0037184 120.6666667 9.83 15.03666667 0.062154696 0.762970498 0.498780758 -2 -1 -1.5 0.15 dme-miR-304-5p 6mer3-8 TGAGAT 3L 22733303 22733308 + 3L_22733303_22733308_+ 0.999998216 0.544824111 0.772411164 0.321856693 CG11367 FBtr0078528 22733038 22733446 3L + 22733285 22733327 3'utr CG11367 FlyBase G32386.1 ATTACTTCTAAGAATTCCTGAGATGTACATTTATAAATAAGTC 10 22733315 0.98247389 4 10 83 1 1 0 0 0 10 0 0 10 3L:22733285-22733327 6 CG11367 FBtr0078528 22733038 22733446 TGAGAT 6mer3-8 dme-miR-304-5p 3L + 22733294 22733321 3'utr CG11367 FlyBase G24475.1 AAGAATTCCTGAGATGTACATTTATAAA 5 22733315 0.675238928 4 5 39 1 0.954242509 0 0.6 0.777777778 5 0 0 9 3L:22733294-22733321 6 7 2141 FBgn0037185 167.9933333 11.46666667 17.67 0.04166832 0.610465116 0.396151669 -12 -12 -12 0.15 dme-miR-184-5p 6mer3-8 TGATAA 3L 22738872 22738877 - 3L_22738872_22738877_- 0.999850754 0.704733666 0.85229221 0.208679303 l(3)04053 FBtr0078535 22738600 22739100 3L - 22738869 22738912 3'utr l(3)04053 FlyBase G39329.1 ATGTGAGAATCAAAGCGCAAACTCGTGATGTTGGTTGATAAAGC 33 22738882 0.73907171 6 27 177 0.846153846 1.217483944 0.179487179 0.121212121 0.256410256 33 5 1 33 3L:22738869-22738912 6 l(3)04053 FBtr0078535 22738600 22739100 TGATAA 6mer3-8 dme-miR-184-5p 3L - 22738869 22738959 3'utr l(3)04053 FlyBase G29706.1 GTTGCATTGGGTTATATTTGGTGGGAAAATTAAGGGAGGGATGGGCAATGTGAGAATCAAAGCGCAAACTCGTGATGTTGGTTGATAAAGC 32 22738882 0.839916498 11 28 172 0.86 1.633468456 0.26 0.46875 0.66 32 7 0 43 3L:22738869-22738959 6 8.5 2142 FBgn0010830 273 13.44666667 20.59666667 0.031135531 0.632126921 0.412688137 5 5 5 0.15 dme-miR-1007-3p 7mer-m8 TGAGCTT 3L 22739004 22739010 - 3L_22739004_22739010_- 0.594183866 0.537457874 0.56582087 0.040111339 l(3)04053 FBtr0078535 22738600 22739100 3L - 22738958 22739046 3'utr l(3)04053 FlyBase G39330.1 TTTTCTGTGTAAACACTGTATCCCACGACTTCGCATTGAGCTTGTTTTTAGATGACCCCGCAAACATTTTATGTTTCCGTATTATCTGT 12 22739010 0.985792133 4 11 103 1 1.146128036 0.071428571 0.166666667 0.285714286 12 0 0 14 3L:22738958-22739046 7 l(3)04053 FBtr0078535 22738600 22739100 TGAGCTT 7mer-m8 dme-miR-1007-3p 3L - 22738993 22739049 3'utr l(3)04053 FlyBase G29707.1 TTGTTTTCTGTGTAAACACTGTATCCCACGACTTCGCATTGAGCTTGTTTTTAGATG 11 22739010 0.80586764 6 11 101 1 1.113943352 0.307692308 0.181818182 0.307692308 11 0 0 13 3L:22738993-22739049 7 7 2143 FBgn0010830 273 13.44666667 20.59666667 0.025641026 0.520575112 0.339860819 0 0 0 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 22747952 22747958 + 3L_22747952_22747958_+ 0.633652733 0.626194187 0.62992346 0.005273956 CG7369 FBtr0078530 22747716 22748614 3L + 22747938 22747969 3'utr CG7369 FlyBase G32401.1 ATTTCCGTTATCTTTGTGTTCCTGTTCCAAAT 77 22747951 0.707693543 6 76 831 0.99122807 2.053078443 0.105263158 0.38961039 0.587719298 77 1 0 113 3L:22747938-22747969 7 CG7369 FBtr0078530 22747716 22748614 TGTGTTC 7mer-m8 dme-miR-317-3p 3L + 22747938 22747972 3'utr CG7369 FlyBase G24485.1 ATTTCCGTTATCTTTGTGTTCCTGTTCCAAATTTG 62 22747951 0.707773385 6 61 674 1 1.995635195 0.181818182 0.435483871 0.646464646 62 0 0 99 3L:22747938-22747972 7 69 2144 FBgn0037188 267.3333333 8.483333333 12.97666667 0.258104738 8.133595285 5.317236065 1 1 1 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 22748070 22748077 + 3L_22748070_22748077_+ 0.490778304 0.490698753 0.490738528 5.62E-05 CG7369 FBtr0078530 22747716 22748614 3L + 22748031 22748103 3'utr CG7369 FlyBase G32403.1 TTAATTAGACCATTGGGAGGATGGGAATAATGAAAGAATGTACTTAAGGCCGTACACGGCTAACAGCTAATGC 492 22748069 0.872856392 8 483 2403 0.984293194 2.751279104 0.139616056 0.16122449 0.282722513 490 9 0 564 3L:22748031-22748103 8 CG7369 FBtr0078530 22747716 22748614 GTACTTAA 8mer-A1 dme-miR-252-5p 3L + 22748037 22748100 3'utr CG7369 FlyBase G24486.1 AGACCATTGGGAGGATGGGAATAATGAAAGAATGTACTTAAGGCCGTACACGGCTAACAGCTAA 271 22748069 0.87474947 6 267 1316 0.995098039 2.608526034 0.137254902 0.357933579 0.573529412 271 2 0 406 3L:22748037-22748100 8 376 2145 FBgn0037188 267.3333333 8.483333333 12.97666667 1.406483791 44.32220039 28.97508348 1 1 1 0.15 dme-miR-8-3p 7mer-m8 CAGTATT 3L 22748217 22748223 + 3L_22748217_22748223_+ 0.661615243 0.661504501 0.661559872 7.83E-05 CG7369 FBtr0078530 22747716 22748614 3L + 22748170 22748231 3'utr CG7369 FlyBase G32404.1 AAACCAATCTGACAAAGCTACATGAGTACGCGATATCCGTACGTGACCAGTATTTATATTTA 14 22748224 0.751754552 11 14 84 1 1.230448921 0.117647059 0.214285714 0.352941176 14 0 0 17 3L:22748170-22748231 7 CG7369 FBtr0078530 22747716 22748614 CAGTATT 7mer-m8 dme-miR-8-3p 3L + 22748185 22748227 3'utr CG7369 FlyBase G24487.1 AGCTACATGAGTACGCGATATCCGTACGTGACCAGTATTTATA 13 22748222 0.789043986 8 12 75 0.863636364 1.278753601 0 0.384615385 0.636363636 13 3 0 19 3L:22748185-22748227 7 9 2146 FBgn0037188 267.3333333 8.483333333 12.97666667 0.033665835 1.060903733 0.69355253 -7 -5 -6 0.15 dme-miR-282-5p 6mer2-7 GAGGCT 3L 22748323 22748328 + 3L_22748323_22748328_+ 0.999999919 0.999220281 0.9996101 0.00055126 CG7369 FBtr0078530 22747716 22748614 3L + 22748297 22748344 3'utr CG7369 FlyBase G32405.1 AACGGATTTCATTCTGATTCTGTCTCGAGGCTTTTTGCATCAGCAACA 41 22748329 0.706988239 6 41 396 1 1.716003344 0.096153846 0.243902439 0.403846154 41 0 0 52 3L:22748297-22748344 6 CG7369 FBtr0078530 22747716 22748614 GAGGCT 6mer2-7 dme-miR-282-5p 3L + 22748307 22748344 3'utr CG7369 FlyBase G24488.1 ATTCTGATTCTGTCTCGAGGCTTTTTGCATCAGCAACA 24 22748330 0.628369442 7 24 229 1 1.568201724 0.189189189 0.375 0.594594595 24 0 0 37 3L:22748307-22748344 6 32.5 2147 FBgn0037188 267.3333333 8.483333333 12.97666667 0.121571072 3.831041257 2.504495248 -6 -7 -6.5 0.15 dme-miR-283-5p 8mer-A1 TGATATTA 3L 22748527 22748534 + 3L_22748527_22748534_+ 0.592186745 0.584155511 0.588171128 0.005678916 CG7369 FBtr0078530 22747716 22748614 3L + 22748496 22748539 3'utr CG7369 FlyBase G32406.1 GATTTTGCAATATTGTGGATGAATTCATTATTGATATTAATTAT 7 22748525 0.989985562 5 7 69 1 0.84509804 0.142857143 0 0 7 0 0 7 3L:22748496-22748539 8 CG7369 FBtr0078530 22747716 22748614 TGATATTA 8mer-A1 dme-miR-283-5p 3L + 22748490 22748534 3'utr CG7369 FlyBase G24489.1 TTGCAAGATTTTGCAATATTGTGGATGAATTCATTATTGATATTA 6 22748523 0.993493826 4 5 62 0.833333333 0.698970004 0 0 0 6 1 0 5 3L:22748490-22748534 8 4.5 2148 FBgn0037188 267.3333333 8.483333333 12.97666667 0.016832918 0.530451866 0.346776265 2 4 3 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 3L 22784670 22784675 + 3L_22784670_22784675_+ 0.81992264 0.870043937 0.844983289 0.035441111 SPoCk FBtr0306600|FBtr0078533|FBtr0113437|FBtr0078531|FBtr0078532|FBtr0332105|FBtr0302134 22784486|22784486|22784486|22784486|22784486|22784486|22784486 22785235|22787631|22785235|22785235|22785235|22785235|22785235 3L + 22784632 22784701 3'utr SPoCk FlyBase G32421.1 GAGCGACGGACCAAGGATGTGTGTGTTTAATTTTACATTTGACTTGACCAATTAAGAATGATTTAATTGT 19 22784684 0.982139242 10 18 135 0.961538462 1.397940009 0.076923077 0.368421053 0.538461538 19 1 0 25 3L:22784632-22784701 6 SPoCk FBtr0302134|FBtr0332105|FBtr0078532|FBtr0078531|FBtr0113437|FBtr0078533|FBtr0306600 22784486|22784486|22784486|22784486|22784486|22784486|22784486 22785235|22785235|22785235|22785235|22785235|22787631|22785235 TTGACT 6mer3-8 dme-miR-1012-3p 3L + 22784616 22784695 3'utr SPoCk FlyBase G24497.1 GAAAAGCCGAAAATAAGAGCGACGGACCAAGGATGTGTGTGTTTAATTTTACATTTGACTTGACCAATTAAGAATGATTT 10 22784676 0.976309438 6 9 59 0.85 1.230448921 0.3 0.5 0.75 10 3 0 17 3L:22784616-22784695 6 7.5 2149 FBgn0052451 1200.69 35.10333333 53.84666667 0.006246408 0.213654924 0.139284388 -14 -6 -10 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 22785085 22785091 + 3L_22785085_22785091_+ 0.726131919 0.738710567 0.732421243 0.008894484 SPoCk FBtr0306600|FBtr0306600|FBtr0306600|FBtr0113437|FBtr0113437|FBtr0113437|FBtr0078531|FBtr0078531|FBtr0078531|FBtr0078532|FBtr0078532|FBtr0078532|FBtr0332105|FBtr0332105|FBtr0332105|FBtr0302134|FBtr0302134|FBtr0302134 22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486 22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235 3L + 22784943 22785114 3'utr SPoCk FlyBase G32424.1 TACAATGGGCTGCAAAGCTTTTTTTATTTAACTTTTATTTTCATTTTATCTCTAAGTGCTTCTCTAGTTTCTAATGCTCACCGCGCAATTTGAGTCAATATGAAGTGTTTAATAATCTACAATGTCGGCAAAAACTGTTTAATGTGATATTATTTTAAGCACATAAACCAGA 198 22785081 0.991691345 22 184 2018 0.940677966 1.568201724 0.084745763 0.151515152 0.288135593 198 9 5 222 3L:22784943-22785114 7 SPoCk FBtr0302134|FBtr0302134|FBtr0302134|FBtr0332105|FBtr0332105|FBtr0332105|FBtr0078532|FBtr0078532|FBtr0078532|FBtr0078531|FBtr0078531|FBtr0078531|FBtr0113437|FBtr0113437|FBtr0113437|FBtr0306600|FBtr0306600|FBtr0306600 22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486 22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 22785056 22785115 3'utr SPoCk FlyBase G24498.2 AATCTACAATGTCGGCAAAAACTGTTTAATGTGATATTATTTTAAGCACATAAACCAGAT 107 22785081 0.719970686 11 96 1054 0.89261745 1.220761654 0.067114094 0.289719626 0.489932886 107 9 7 133 3L:22785056-22785115 7 135.5 2150 FBgn0052451 1200.69 35.10333333 53.84666667 0.112851777 3.860032286 2.516404606 4 4 4 0.15 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 22786246 22786253 + 3L_22786246_22786253_+ 0.668728671 0.668731885 0.668730278 2.26E-06 SPoCk FBtr0078533 22784486 22787631 3L + 22786198 22786275 3'utr SPoCk FlyBase G32425.1 GCTCACTCTGTCCGTCCGTATGTCTATCCGTATAAATGTAGAAATCTTGGCAGCTATAAAAGCTAGAGGTTAGGCATG 32 22786245 0.981636243 7 27 200 0.828571429 0.985276743 0.228571429 0.09375 0.171428571 32 4 2 29 3L:22786198-22786275 8 SPoCk FBtr0078533 22784486 22787631 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L + 22786197 22786272 3'utr SPoCk FlyBase G24500.1 TGCTCACTCTGTCCGTCCGTATGTCTATCCGTATAAATGTAGAAATCTTGGCAGCTATAAAAGCTAGAGGTTAGGC 19 22786245 0.973504655 4 19 119 1 1.477121255 0.433333333 0.526315789 0.7 19 0 0 30 3L:22786197-22786272 8 24.5 2151 FBgn0052451 1200.69 35.10333333 53.84666667 0.020404934 0.697939417 0.454995667 1 1 1 0.15 dme-miR-12-5p 7mer-A1 ATACTCA 3L 22790253 22790259 - 3L_22790253_22790259_- 0.823349561 0.822941114 0.823145338 0.000288853 jim FBtr0078582|FBtr0304985 22789231|22789231 22797911|22797911 3L - 22790212 22790310 3'utr jim FlyBase G39340.1 CGGAACAACACTAATCTCGGTCATTGCAAAATTGATTGCATAAAACAATGTATACTCAAGTCTTGGCAACTATTTAAAAAAAAATTCACGTTTAATTCC 23 22790262 0.974170267 7 23 141 1 1.431363764 0.148148148 0.173913043 0.296296296 23 0 0 27 3L:22790212-22790310 7 jim FBtr0304985|FBtr0078582 22789231|22789231 22797911|22797911 ATACTCA 7mer-A1 dme-miR-12-5p 3L - 22790214 22790268 3'utr jim FlyBase G29715.1 AAACAATGTATACTCAAGTCTTGGCAACTATTTAAAAAAAAATTCACGTTTAATT 11 22790247 0.976771395 5 11 70 1 1.230448921 0.058823529 0.454545455 0.647058824 11 0 0 17 3L:22790214-22790268 7 12.5 2152 FBgn0027339 2455.313333 43.04666667 66.12 0.005091 0.290382531 0.189050212 3 -12 -4.5 0.15 dme-miR-33-5p 7mer-A1 AATGCAA 3L 22796093 22796099 - 3L_22796093_22796099_- 0.522936112 0.482196521 0.502566317 0.028807247 jim FBtr0078582|FBtr0333212|FBtr0100184|FBtr0330076|FBtr0333213|FBtr0333211|FBtr0304985 22789231|22795975|22795975|22795975|22795975|22795975|22789231 22797911|22797911|22797911|22797557|22797911|22797911|22797911 3L - 22796046 22796107 5'utr jim FlyBase G39342.1 AAGTTTCTAATGCAATCAAAGTAAGTGCTCCGAATACGGTTTGTTTTCACTGTTTTAAATTT 22 22796085 0.879169256 10 21 180 0.931034483 1.431363764 0.275862069 0.272727273 0.448275862 22 2 0 27 3L:22796046-22796107 7 jim FBtr0333211|FBtr0304985|FBtr0330076|FBtr0333213|FBtr0100184|FBtr0078582|FBtr0333212 22795975|22789231|22795975|22795975|22795975|22789231|22795975 22797911|22797911|22797557|22797911|22797911|22797911|22797911 AATGCAA 7mer-A1 dme-miR-33-5p 3L - 22796010 22796107 5'utr jim FlyBase G29718.1 AAGTTTCTAATGCAATCAAAGTAAGTGCTCCGAATACGGTTTGTTTTCACTGTTTTAAATTTAAAGTTTATGAATTATGTTTGGATATTTTATTTAAA 14 22796082 0.985388586 11 12 115 0.909090909 1 0.045454545 0.5 0.681818182 14 1 1 20 3L:22796010-22796107 7 6.5 2153 FBgn0027339 2455.313333 43.04666667 66.12 0.00264732 0.150998916 0.09830611 -14 -17 -15.5 0.15 dme-miR-283-5p 8mer-m1 TGATATTT 3L 22796248 22796255 - 3L_22796248_22796255_- 0.540865615 0.553986038 0.547425826 0.009277524 jim FBtr0078582|FBtr0333212|FBtr0100184|FBtr0330076|FBtr0333213|FBtr0333211|FBtr0304985 22789231|22795975|22795975|22795975|22795975|22795975|22789231 22797911|22797911|22797911|22797557|22797911|22797911|22797911 3L - 22796176 22796348 5'utr jim FlyBase G39344.1 AGTTCTTCCCCTGCCAACTGTGTGGATATAATCGACAAATTTAGTTTCTTAACAAATTTTCCAATGTACCGTCAAAGCATTTATAACTGTTATTGATATTTTAGAATATGTTTCCTAAAAAGTATACATATTTTATGTATATGTAGAAAACACCGTGGAAGATAAGAAATTAT 75 22796284 0.99043153 22 68 691 0.914634146 1.176091259 0.024390244 0.093333333 0.170731707 75 3 4 75 3L:22796176-22796348 8 jim FBtr0333211|FBtr0304985|FBtr0330076|FBtr0333213|FBtr0100184|FBtr0078582|FBtr0333212 22795975|22789231|22795975|22795975|22795975|22789231|22795975 22797911|22797911|22797557|22797911|22797911|22797911|22797911 TGATATTT 8mer-m1 dme-miR-283-5p 3L - 22796212 22796357 5'utr jim FlyBase G29720.1 CACCATCTAAGTTCTTCCCCTGCCAACTGTGTGGATATAATCGACAAATTTAGTTTCTTAACAAATTTTCCAATGTACCGTCAAAGCATTTATAACTGTTATTGATATTTTAGAATATGTTTCCTAAAAAGTATACATATTTTATG 62 22796284 0.991149783 21 51 548 0.831168831 1.204119983 0.064935065 0.209677419 0.363636364 62 10 3 64 3L:22796212-22796357 8 27 2154 FBgn0027339 2455.313333 43.04666667 66.12 0.01099656 0.627226266 0.408348457 29 29 29 0.15 dme-miR-7-5p 7mer-m8 GTCTTCC 3L 22796627 22796633 - 3L_22796627_22796633_- 0.705884531 0.705948525 0.705916528 4.53E-05 jim FBtr0078582|FBtr0333212|FBtr0100184|FBtr0330076|FBtr0333213|FBtr0333211|FBtr0304985 22789231|22795975|22795975|22795975|22795975|22795975|22789231 22797911|22797911|22797911|22797557|22797911|22797911|22797911 3L - 22796595 22796671 5'utr jim FlyBase G39345.1 ATGAAACCTTAAGTACATTGACTTAGGATTCATTTGTTGTCTTCCCCAACTAATTATGTGTAATTTATGTTGAGTTT 37 22796634 0.989463104 9 36 350 0.956521739 1.643452676 0.086956522 0.216216216 0.369565217 37 2 0 44 3L:22796595-22796671 7 jim FBtr0333211|FBtr0304985|FBtr0330076|FBtr0333213|FBtr0100184|FBtr0078582|FBtr0333212 22795975|22789231|22795975|22795975|22795975|22789231|22795975 22797911|22797911|22797557|22797911|22797911|22797911|22797911 GTCTTCC 7mer-m8 dme-miR-7-5p 3L - 22796618 22796664 5'utr jim FlyBase G29721.1 CTTAAGTACATTGACTTAGGATTCATTTGTTGTCTTCCCCAACTAAT 22 22796634 0.647549083 8 21 194 0.931034483 0.954242509 0.068965517 0.272727273 0.448275862 22 0 2 27 3L:22796618-22796664 7 22 2155 FBgn0027339 2455.313333 43.04666667 66.12 0.00896016 0.511073254 0.332728373 1 1 1 0.15 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 22796997 22797004 - 3L_22796997_22797004_- 0.668729424 0.668729073 0.668729249 2.12E-07 jim FBtr0078582|FBtr0333212|FBtr0100184|FBtr0330076|FBtr0333213|FBtr0333211|FBtr0304985 22789231|22795975|22795975|22795975|22795975|22795975|22789231 22797911|22797911|22797911|22797557|22797911|22797911|22797911 3L - 22796888 22797086 5'utr jim FlyBase G39347.1 AATTAATCGAGGATATACCACTTAGGCGTAATACTAGGATAGCTCCGATACAATGAGTATGAACATGTGACGTGATAGATAGGGCAGCTATTTGTGGCGAAGGCAGAAGGGGCAGAGCAAAAGGTTGATGGCAAAGAATAGGATGGGGAACGCAGACGTTGGCGCTGAGTAATTTGATTTTTGAAGCAGCATCAAAATT 194 22796995 0.956738101 29 175 1173 0.902542373 1.851258349 0.419491525 0.164948454 0.313559322 194 21 2 213 3L:22796888-22797086 8 jim FBtr0333211|FBtr0304985|FBtr0330076|FBtr0333213|FBtr0100184|FBtr0078582|FBtr0333212 22795975|22789231|22795975|22795975|22795975|22789231|22795975 22797911|22797911|22797557|22797911|22797911|22797911|22797911 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L - 22796917 22797090 5'utr jim FlyBase G29724.1 ATACAATTAATCGAGGATATACCACTTAGGCGTAATACTAGGATAGCTCCGATACAATGAGTATGAACATGTGACGTGATAGATAGGGCAGCTATTTGTGGCGAAGGCAGAAGGGGCAGAGCAAAAGGTTGATGGCAAAGAATAGGATGGGGAACGCAGACGTTGGCGCTGAGT 151 22797007 0.966308775 22 135 919 0.848360656 1.838849091 0.409836066 0.42384106 0.643442623 151 35 2 207 3L:22796917-22797090 8 132.5 2156 FBgn0027339 2455.313333 43.04666667 66.12 0.053964599 3.078054824 2.003932244 -9 3 -3 0.15 dme-miR-14-3p 6mer3-8 AAGACT 3L 22797170 22797175 - 3L_22797170_22797175_- 0.999500322 0.999501959 0.999501141 1.20E-06 jim FBtr0078582|FBtr0333212|FBtr0100184|FBtr0330076|FBtr0333213|FBtr0333211|FBtr0304985 22789231|22795975|22795975|22795975|22795975|22795975|22789231 22797911|22797911|22797911|22797557|22797911|22797911|22797911 3L - 22797155 22797278 5'utr jim FlyBase G39348.1 GGTCAATGTGTAAGAGAAGTAATGAGCAGAATGAAGGAGAGAAACGAGAGCCAAAACACAACGTTATACGATTTCTATTTGTTTTAGCACCCCAACAACTTTTAAGACTAAAAATACATCAAAT 31 22797177 0.999975171 11 27 131 0.861111111 1.491361694 0.25 0.161290323 0.277777778 31 5 0 31 3L:22797155-22797278 6 jim FBtr0333211|FBtr0304985|FBtr0330076|FBtr0333213|FBtr0100184|FBtr0078582|FBtr0333212 22795975|22789231|22795975|22795975|22795975|22789231|22795975 22797911|22797911|22797557|22797911|22797911|22797911|22797911 AAGACT 6mer3-8 dme-miR-14-3p 3L - 22797156 22797204 5'utr jim FlyBase G29725.1 CTATTTGTTTTAGCACCCCAACAACTTTTAAGACTAAAAATACATCAAA 15 22797176 0.549390533 4 13 77 0.823529412 1.146128036 0 0.133333333 0.235294118 15 3 0 14 3L:22797156-22797204 6 12.5 2157 FBgn0027339 2455.313333 43.04666667 66.12 0.005091 0.290382531 0.189050212 2 1 1.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3L 22797335 22797340 - 3L_22797335_22797340_- 0.654412937 0.842903341 0.748658139 0.13328284 jim FBtr0078582|FBtr0333212|FBtr0100184|FBtr0330076|FBtr0333213|FBtr0333211|FBtr0304985 22789231|22795975|22795975|22795975|22795975|22795975|22789231 22797911|22797911|22797911|22797557|22797911|22797911|22797911 3L - 22797317 22797361 5'utr jim FlyBase G39349.1 AGAACGCAAACAGGACGAGTACTAGTCTTTTTGAAAAGGACTCTA 89 22797334 0.980829206 7 84 602 0.954954955 1.247154615 0.072072072 0.202247191 0.36036036 89 0 5 106 3L:22797317-22797361 6 jim FBtr0333211|FBtr0304985|FBtr0330076|FBtr0333213|FBtr0100184|FBtr0078582|FBtr0333212 22795975|22789231|22795975|22795975|22795975|22789231|22795975 22797911|22797911|22797557|22797911|22797911|22797911|22797911 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3L - 22797320 22797362 5'utr jim FlyBase G29726.1 CAGAACGCAAACAGGACGAGTACTAGTCTTTTTGAAAAGGACT 70 22797334 0.979087952 8 67 459 0.944444444 2.008600172 0.037037037 0.371428571 0.592592593 70 6 0 102 3L:22797320-22797362 6 79.5 2158 FBgn0027339 2455.313333 43.04666667 66.12 0.03237876 1.846832895 1.202359347 -6 -6 -6 0.15 dme-bantam-3p 6mer2-7 GATCTC 3L 22797563 22797568 - 3L_22797563_22797568_- 0.991261882 0.997191208 0.994226545 0.004192648 jim FBtr0078582|FBtr0333212|FBtr0100184|FBtr0333213|FBtr0333211|FBtr0304985 22789231|22795975|22795975|22795975|22795975|22789231 22797911|22797911|22797911|22797911|22797911|22797911 3L - 22797366 22797611 stop_codon jim FlyBase G39350.1 TCACACGCGATTCCCATTCATCCACACATACACTCGATATTCGGATCTCTATGATGTCATCAGTAGGAGAGACAGGAGCCGGAGGCAGGAATTCAAAGTTAATAAACACAAACTATTCACCATACTTCATAGGTTCGATTAGTTCTTTAGTATTAGACGCAAAACAAATTCTCCTAGTTTTTAAAACTAATCTTAAAATCACAAAACACAGTTTGGTAATGGCAAACGAACGAACCGAGAGGAGCT 115 22797561 0.983779384 27 105 819 0.925925926 1.619788758 0.192592593 0.147826087 0.274074074 115 8 2 125 3L:22797366-22797611 6 jim FBtr0333211|FBtr0304985|FBtr0333213|FBtr0100184|FBtr0078582|FBtr0333212 22795975|22789231|22795975|22795975|22789231|22795975 22797911|22797911|22797911|22797911|22797911|22797911 GATCTC 6mer2-7 dme-bantam-3p 3L - 22797416 22797598 stop_codon jim FlyBase G29727.1 CCATTCATCCACACATACACTCGATATTCGGATCTCTATGATGTCATCAGTAGGAGAGACAGGAGCCGGAGGCAGGAATTCAAAGTTAATAAACACAAACTATTCACCATACTTCATAGGTTCGATTAGTTCTTTAGTATTAGACGCAAAACAAATTCTCCTAGTTTTTAAAACTAATCTTAA 81 22797561 0.970681368 19 75 596 0.918699187 2.053078443 0.276422764 0.419753086 0.617886179 81 10 0 113 3L:22797416-22797598 6 52.5 2159 FBgn0027339 2455.313333 43.04666667 66.12 0.0213822 1.219606628 0.794010889 -7 -7 -7 0.15 dme-miR-8-3p 7mer-A1 AGTATTA 3L 22905391 22905397 + 3L_22905391_22905397_+ 0.823143979 0.823326703 0.823235341 0.000129188 BoYb FBtr0078559 22905182 22905470 3L + 22905369 22905405 3'utr BoYb FlyBase G32463.1 TAGAAAAAATCGTGTGCTCTTGAGTATTAAAACCTGT 11 22905389 0.733891611 3 10 89 0.933333333 1.146128036 0.066666667 0.272727273 0.466666667 11 1 0 14 3L:22905369-22905405 7 BoYb FBtr0078559 22905182 22905470 AGTATTA 7mer-A1 dme-miR-8-3p 3L + 22905367 22905401 3'utr BoYb FlyBase G24523.1 ACTAGAAAAAATCGTGTGCTCTTGAGTATTAAAAC 6 22905388 0.974411496 3 6 39 1 1 0 0.666666667 0.8 6 0 0 10 3L:22905367-22905401 7 8 2160 FBgn0037205 488.74 16.67 25.54666667 0.016368621 0.479904019 0.313152401 2 3 2.5 0.15 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 22914478 22914484 + 3L_22914478_22914484_+ 0.823336932 0.823142794 0.823239863 0.000137249 CG12768 FBtr0331397|FBtr0331396 22914244|22914244 22914758|22914758 3L + 22914453 22914504 3'utr CG12768 FlyBase G32470.1 AAATAATTTTTTGACTTCGCCTACTGCAGCTATATTATAAAGTCGTCCGATT 12 22914477 0.793827541 5 12 102 1 1.113943352 0 0.083333333 0.153846154 12 0 0 13 3L:22914453-22914504 7 CG12768 FBtr0331396|FBtr0331397 22914244|22914244 22914758|22914758 GCAGCTA 7mer-A1 dme-miR-980-3p 3L + 22914462 22914490 3'utr CG12768 FlyBase G24530.1 TTTGACTTCGCCTACTGCAGCTATATTAT 11 22914475 0.703517005 5 10 74 0.928571429 1.113943352 0.142857143 0.181818182 0.357142857 11 1 0 13 3L:22914462-22914490 7 11 2161 FBgn0037206 334.1233333 20.85 31.84666667 0.032921975 0.527577938 0.345405066 1 3 2 0.15 dme-miR-263a-5p 8mer-A1 GTGCCATA 3L 22951555 22951562 + 3L_22951555_22951562_+ 0.57526098 0.576584875 0.575922928 0.000936139 Mes2 FBtr0078561|FBtr0078563 22951389|22951389 22952248|22952248 3L + 22951204 22951589 stop_codon Mes2 FlyBase G32487.1 GGGCGTCGCAAGCGGAGGGTTGGATCTGCCGCCCCCACAAACTGTACGTGAGGTTTTGAACTCCAAGTTCTGCGGCTTTATTTCAGCCAAGCTAAACAGCATGGAGGACTCGGACGCGGACAATTTAATGAATCGCATTCTTCTCTTACTGGTTCAAGTGCAGCAGTGCGAAGGGTCCACGAAATAGACAGCGGAGGAGAAGAGCGCTAAGTGTACGGGTGTAATTATAGTAGCCAAAAAAAAGTACATAATGGAATGATGTTGCTGCTCAGAGCACTTATAACTGAATTTTCTTGCCATTATATATTACTTTCCTAAAGAAATACAAATTTACTTGCCAATGCCAAATCTGTGCCATACCAAAAGGATCAATCAAATATGAATGA 970 22951554 0.999995003 64 933 5859 0.966192171 2.190731785 0.072064057 0.135051546 0.253558719 970 32 6 1086 3L:22951204-22951589 8 Mes2 FBtr0078561|FBtr0078563 22951389|22951389 22952248|22952248 GTGCCATA 8mer-A1 dme-miR-263a-5p 3L + 22951332 22951588 stop_codon Mes2 FlyBase G24549.1 TGAATCGCATTCTTCTCTTACTGGTTCAAGTGCAGCAGTGCGAAGGGTCCACGAAATAGACAGCGGAGGAGAAGAGCGCTAAGTGTACGGGTGTAATTATAGTAGCCAAAAAAAAGTACATAATGGAATGATGTTGCTGCTCAGAGCACTTATAACTGAATTTTCTTGCCATTATATATTACTTTCCTAAAGAAATACAAATTTACTTGCCAATGCCAAATCTGTGCCATACCAAAAGGATCAATCAAATATGAATG 652 22951554 0.969292382 43 621 3926 0.952565344 2.390935107 0.065827686 0.377300613 0.60696999 652 46 3 984 3L:22951332-22951588 8 531 2162 FBgn0037207 3401.653333 185.0666667 283.5166667 0.156100563 2.869236311 1.872905767 1 1 1 0.15 dme-miR-79-3p 7mer-A1 AGCTTTA 3L 22951968 22951974 + 3L_22951968_22951974_+ 0.823349562 0.823349562 0.823349562 0 Mes2 FBtr0078561|FBtr0078563 22951389|22951389 22952248|22952248 3L + 22951892 22952067 3'utr Mes2 FlyBase G32488.1 AAAAAGCGAGCATATTACTCATAGTTTCATATACAGCGATATGAATATTAACAATATCTGAACACTAAATGAGAACAGCTTTAACAATTTGTCGTTTTTGAATAAAACACCATCTTTGGCAGTAATGCTTTGCTATCGATGTACGCAGACAATGTTTTGGCCATTCAGCCCAATTT 46 22951961 0.922966987 25 43 358 0.936170213 1.643452676 0.191489362 0.02173913 0.042553191 46 3 0 44 3L:22951892-22952067 7 Mes2 FBtr0078561|FBtr0078563 22951389|22951389 22952248|22952248 AGCTTTA 7mer-A1 dme-miR-79-3p 3L + 22951843 22952013 3'utr Mes2 FlyBase G24552.1 CTTGTTAAGTTGAAAACGTAGAAATTAGAAAAGAAAAGTTTTTAACTTAAAAAAGCGAGCATATTACTCATAGTTTCATATACAGCGATATGAATATTAACAATATCTGAACACTAAATGAGAACAGCTTTAACAATTTGTCGTTTTTGAATAAAACACCATCTTTGGCAG 34 22951980 0.983481742 16 30 237 0.914893617 1.633468456 0.191489362 0.294117647 0.489361702 34 4 0 43 3L:22951843-22952013 7 7 2163 FBgn0037207 3401.653333 185.0666667 283.5166667 0.002057823 0.037824207 0.024689907 7 -12 -2.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 22952122 22952127 + 3L_22952122_22952127_+ 0.916975353 0.994741853 0.955858603 0.054989219 Mes2 FBtr0078561|FBtr0078563 22951389|22951389 22952248|22952248 3L + 22952090 22952135 3'utr Mes2 FlyBase G32489.1 TTTCCGTTTTTCGGTGGATATTGAGTAATAAAGTACCTTTAAATAT 8 22952129 0.638003695 5 8 57 1 0.954242509 0 0.125 0.222222222 8 0 0 9 3L:22952090-22952135 6 Mes2 FBtr0078561|FBtr0078563 22951389|22951389 22952248|22952248 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 22952063 22952182 3'utr Mes2 FlyBase G24553.1 AATTTAAATCAAAAATTTTGAAAAAGTTTTCCGTTTTTCGGTGGATATTGAGTAATAAAGTACCTTTAAATATAAAAAAATCAAACGTGTCTACCGAACATGAACATAATCAGCCGATTT 24 22952129 0.985394676 12 21 176 0.914285714 1.505149978 0.114285714 0.416666667 0.6 24 3 0 32 3L:22952063-22952182 6 9 2164 FBgn0037207 3401.653333 185.0666667 283.5166667 0.002645772 0.048631124 0.031744166 -7 -7 -7 0.15 dme-miR-988-3p 7mer-A1 CAAGGGA 3L 23318907 23318913 - 3L_23318907_23318913_- 0.782239703 0.782536846 0.782388274 0.000210081 alpha-Cat FBtr0339894 23318644 23329837 3L - 23318893 23318943 3'utr alpha-Cat FlyBase G39447.2 AAAACCAGAAGAAGTACGGGCCAAAGTTCGCAAGGGATCTCAAAAAAAGGT 31 23318917 0.942441584 3 26 88 0.891891892 1.217483944 0.216216216 0.193548387 0.324324324 31 3 1 33 3L:23318893-23318943 7 alpha-Cat FBtr0339894 23318644 23329837 CAAGGGA 7mer-A1 dme-miR-988-3p 3L - 23318893 23318964 3'utr alpha-Cat FlyBase G29804.1 AAAACCATTGGTCAGGCCTGAAAAACCAGAAGAAGTACGGGCCAAAGTTCGCAAGGGATCTCAAAAAAAGGT 27 23318917 0.759385332 7 25 88 0.930232558 1.602059991 0.209302326 0.481481481 0.674418605 27 3 0 40 3L:23318893-23318964 7 24.5 2165 FBgn0010215 3733.256667 144.9433333 221.23 0.006562635 0.169031576 0.110744474 4 4 4 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 23328751 23328756 - 3L_23328751_23328756_- 0.996106148 0.99999987 0.998053009 0.002753332 alpha-Cat FBtr0339894 23318644 23329837 3L - 23328725 23328782 5'utr alpha-Cat FlyBase G39456.1 TGGATAATTATGAACCATGTATTTACACCAAACGAGTCTTAGAAGCAGTCAAAGTTCT 9 23328760 0.961543715 5 9 50 1 1 0.1 0.111111111 0.2 9 0 0 10 3L:23328725-23328782 6 alpha-Cat FBtr0339894 23318644 23329837 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 23328717 23328773 5'utr alpha-Cat FlyBase G29808.1 ATGAACCATGTATTTACACCAAACGAGTCTTAGAAGCAGTCAAAGTTCTACGAGATC 7 23328759 0.93692024 4 7 29 1 1.146128036 0.214285714 0.428571429 0.714285714 7 0 0 14 3L:23328717-23328773 6 7 2166 FBgn0010215 3733.256667 144.9433333 221.23 0.001875039 0.048294736 0.031641278 4 3 3.5 0.15 dme-miR-8-3p 6mer3-8 CAGTAT 3L 23328918 23328923 - 3L_23328918_23328923_- 0.947942915 0.644626374 0.796284645 0.214477154 alpha-Cat FBtr0339894 23318644 23329837 3L - 23328896 23328964 5'utr alpha-Cat FlyBase G39458.1 CGAGGCAGTGGATGATATTACAACAATTGACGACTTTTTAGCAGTATCTGAGAATCACATTCTTGAAGA 29 23328928 0.96039115 8 27 219 0.972222222 1.544068044 0.055555556 0.172413793 0.333333333 29 1 0 35 3L:23328896-23328964 6 alpha-Cat FBtr0339894 23318644 23329837 CAGTAT 6mer3-8 dme-miR-8-3p 3L - 23328892 23328948 5'utr alpha-Cat FlyBase G29810.1 ATTACAACAATTGACGACTTTTTAGCAGTATCTGAGAATCACATTCTTGAAGATGTA 13 23328927 0.982071212 6 12 97 1 1.230448921 0 0.230769231 0.411764706 13 0 0 17 3L:23328892-23328948 6 16.5 2167 FBgn0010215 3733.256667 144.9433333 221.23 0.004419734 0.113837592 0.074583013 5 4 4.5 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 3L 23329045 23329050 - 3L_23329045_23329050_- 0.996326988 0.999477087 0.997902037 0.002227457 alpha-Cat FBtr0339894 23318644 23329837 3L - 23328997 23329069 5'utr alpha-Cat FlyBase G39459.1 AATAAATGCAGCATCGATATTGACTGTTAGACCGAATTCAAAAGTAGCTCAAGAAAATATGACTACTTATCGA 173 23329043 0.975078345 8 172 1076 0.995614035 2.054995862 0.210526316 0.25433526 0.434210526 173 0 1 227 3L:23328997-23329069 6 alpha-Cat FBtr0339894 23318644 23329837 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 23329017 23329067 5'utr alpha-Cat FlyBase G29811.1 TAAATGCAGCATCGATATTGACTGTTAGACCGAATTCAAAAGTAGCTCAAG 87 23329043 0.970834668 6 87 541 1 2.117271296 0.145038168 0.413793103 0.610687023 87 0 0 131 3L:23329017-23329067 6 127 2168 FBgn0010215 3733.256667 144.9433333 221.23 0.034018556 0.876204494 0.574063192 -7 -7 -7 0.15 dme-miR-307a-3p 6mer2-7 GTTGTG 3L 23329300 23329305 - 3L_23329300_23329305_- 0.813480435 0.999999104 0.906739769 0.131888638 alpha-Cat FBtr0339894 23318644 23329837 3L - 23329258 23329381 5'utr alpha-Cat FlyBase G39462.1 CAGCCCAGGACTCTCTCGAGCGATTGATCAAATGTGTCGAAAGACTCGCGACCTAAGAAGGCAATTGCGAAAGGCTGTTGTGGATCATGTTTCGGACTCTTTTTTGGAGACTACAACTCCTTTG 15 23329317 0.983662649 9 14 112 0.875 1.146128036 0.125 0.066666667 0.125 15 2 0 14 3L:23329258-23329381 6 alpha-Cat FBtr0339894 23318644 23329837 GTTGTG 6mer2-7 dme-miR-307a-3p 3L - 23329256 23329391 5'utr alpha-Cat FlyBase G29812.1 AAAAAGATAACAGCCCAGGACTCTCTCGAGCGATTGATCAAATGTGTCGAAAGACTCGCGACCTAAGAAGGCAATTGCGAAAGGCTGTTGTGGATCATGTTTCGGACTCTTTTTTGGAGACTACAACTCCTTTGCT 11 23329316 0.964560654 11 11 60 1 1.146128036 0.071428571 0.181818182 0.357142857 11 0 0 14 3L:23329256-23329391 6 5 2169 FBgn0010215 3733.256667 144.9433333 221.23 0.001339313 0.03449624 0.022600913 12 11 11.5 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 3L 234028 234034 - 3L_234028_234034_- 0.782723926 0.782751604 0.782737765 1.96E-05 E(bx) FBtr0332101|FBtr0332103|FBtr0301348|FBtr0072522|FBtr0332102|FBtr0332104|FBtr0072521 233924|233924|233924|233924|233924|233924|233924 236879|234298|234298|234298|234298|234298|234298 3L - 233951 234112 3'utr E(bx) FlyBase G32851.1 AACGTACACCAGTATGCAATAAATTTCATATTCACCAGACATTTGTAAGATTAAAAATAATTAAGTAAAACCCCCTTTGTACAAAACATTAAAGTGTAAATAAACAGCATGCATTTCATTTGATATCCTTATCATATGCTGTAGGTTTAAACTTAGGCGTAT 118 234036 0.940288501 20 113 826 0.957746479 1.531478917 0.035211268 0.169491525 0.309859155 118 3 3 136 3L:233951-234112 7 E(bx) FBtr0072521|FBtr0332104|FBtr0332102|FBtr0072522|FBtr0301348|FBtr0332103|FBtr0332101 233924|233924|233924|233924|233924|233924|233924 234298|234298|234298|234298|234298|234298|236879 GTACAAA 7mer-A1 dme-miR-305-5p 3L - 233965 234094 3'utr E(bx) FlyBase G24839.1 ATAAATTTCATATTCACCAGACATTTGTAAGATTAAAAATAATTAAGTAAAACCCCCTTTGTACAAAACATTAAAGTGTAAATAAACAGCATGCATTTCATTTGATATCCTTATCATATGCTGTAGGTTT 88 234036 0.756104698 16 81 580 0.9375 1.477121255 0.0234375 0.329545455 0.5390625 88 5 3 120 3L:233965-234094 7 60 2170 FBgn0000541 5641.79 79.62333333 122.1466667 0.010634923 0.753547955 0.49121275 2 2 2 0.15 dme-miR-980-5p 7mer-m8 GAAAAAC 3L 234226 234232 - 3L_234226_234232_- 0.521353532 0.705252656 0.613303094 0.130036371 E(bx) FBtr0332101|FBtr0332103|FBtr0301348|FBtr0072522|FBtr0332102|FBtr0332104|FBtr0072521 233924|233924|233924|233924|233924|233924|233924 236879|234298|234298|234298|234298|234298|234298 3L - 234201 234321 stop_codon E(bx) FlyBase G32852.1 ATGTTTTTGACCAAAGAACATAAGAAATAATAGCCCTTGAAAACTTTAGAACAAATGATTATAGTTTATAAAGACACTTCTAACAATTTGAAAAACGTCCTTCAGTTATGTATTCTTATTT 98 234221 0.978844029 15 90 614 0.924369748 2.041392685 0.042016807 0.173469388 0.319327731 98 9 0 110 3L:234201-234321 7 E(bx) FBtr0072521|FBtr0332104|FBtr0332102|FBtr0072522|FBtr0301348|FBtr0332103|FBtr0332101 233924|233924|233924|233924|233924|233924|233924 234298|234298|234298|234298|234298|234298|236879 GAAAAAC 7mer-m8 dme-miR-980-5p 3L - 234205 234246 3'utr E(bx) FlyBase G24840.1 ACTTCTAACAATTTGAAAAACGTCCTTCAGTTATGTATTCTT 33 234221 0.768406923 4 33 225 1 1.612783857 0 0.212121212 0.365853659 33 0 0 41 3L:234205-234246 7 41 2171 FBgn0000541 5641.79 79.62333333 122.1466667 0.007267197 0.514924436 0.335662046 -11 -11 -11 0.15 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3L 234419 234424 - 3L_234419_234424_- 0.902829953 0.529684379 0.716257166 0.263853784 E(bx) FBtr0332101 233924 236879 3L - 234387 234475 3'utr E(bx) FlyBase G32854.1 TCAAACACCTATACCAAACTATCTGAGTTTATAGGCGATATGACAAAAATTTTTGACAACTGCCGTTACTATAACCCAAAAGAATCATC 16 234409 0.979514159 12 15 100 0.947368421 1.255272505 0.157894737 0.1875 0.315789474 16 1 0 18 3L:234387-234475 6 E(bx) FBtr0332101 233924 236879 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3L - 234393 234431 3'utr E(bx) FlyBase G24842.1 AAAAATTTTTGACAACTGCCGTTACTATAACCCAAAAGA 6 234410 0.968554305 5 5 42 0.875 0.84509804 0 0.333333333 0.5 6 1 0 7 3L:234393-234431 6 6.5 2172 FBgn0000541 5641.79 79.62333333 122.1466667 0.001152117 0.081634362 0.053214715 -15 -14 -14.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3L 235158 235165 - 3L_235158_235165_- 0.386300507 0.336393794 0.36134715 0.035289366 E(bx) FBtr0332101|FBtr0332101|FBtr0332101 233924|233924|233924 236879|236879|236879 3L - 235106 235189 3'utr E(bx) FlyBase G32856.1 CGACGAGTCACAATTTTATATATGCTGTGATAAATGCCAGGATTGGTTTCATGGCCGTTGCGTTGGAATACTTCAGAGCGAAGC 107 235167 0.732358486 14 95 945 0.888888889 1.572096768 0.023809524 0.177570093 0.301587302 107 12 2 112 3L:235106-235189 8 E(bx) FBtr0332101|FBtr0332101|FBtr0332101 233924|233924|233924 236879|236879|236879 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 235100 235190 3'utr E(bx) FlyBase G24845.1 ACGACGAGTCACAATTTTATATATGCTGTGATAAATGCCAGGATTGGTTTCATGGCCGTTGCGTTGGAATACTTCAGAGCGAAGCAGAGTT 82 235167 0.990608586 14 71 733 0.846153846 1.439332694 0.053846154 0.426829268 0.638461538 82 17 3 110 3L:235100-235190 8 84 2173 FBgn0000541 5641.79 79.62333333 122.1466667 0.014888892 1.054967137 0.68769785 2 2 2 0.15 dme-miR-1008-3p 6mer3-8 AGCTGT 3L 235201 235206 - 3L_235201_235206_- 0.624796939 0.961568702 0.79318282 0.238133623 E(bx) FBtr0332101 233924 236879 3L - 235191 235217 3'utr E(bx) FlyBase G32857.1 AGCTTTACTGTAGCTGTCGTCAACCAT 5 235213 0.764084844 3 4 31 0.833333333 0.698970004 0.166666667 0.2 0.333333333 5 1 0 5 3L:235191-235217 6 E(bx) FBtr0332101 233924 236879 AGCTGT 6mer3-8 dme-miR-1008-3p 3L - 235192 235223 3'utr E(bx) FlyBase G24846.1 CGCAACAGCTTTACTGTAGCTGTCGTCAACCA 5 235212 0.783869917 4 5 32 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3L:235192-235223 6 5 2174 FBgn0000541 5641.79 79.62333333 122.1466667 0.000886244 0.062795663 0.040934396 7 6 6.5 0.15 dme-miR-277-3p 6mer3-8 TGCATT 3L 235246 235251 - 3L_235246_235251_- 0.997578077 0.954794387 0.976186232 0.030252644 E(bx) FBtr0332101 233924 236879 3L - 235222 235253 3'utr E(bx) FlyBase G32858.1 TTTGCATTGATTGCAAGAGGGCGAGAGAAACG 7 235244 0.961445126 4 6 32 0.777777778 0.84509804 0 0.285714286 0.444444444 7 2 0 7 3L:235222-235253 6 E(bx) FBtr0332101 233924 236879 TGCATT 6mer3-8 dme-miR-277-3p 3L - 235226 235259 3'utr E(bx) FlyBase G24847.1 AGTTCATTTGCATTGATTGCAAGAGGGCGAGAGA 5 235244 0.983923368 2 4 31 0.625 0.698970004 0.125 0.4 0.625 5 3 0 5 3L:235226-235259 6 6 2175 FBgn0000541 5641.79 79.62333333 122.1466667 0.001063492 0.075354795 0.049121275 -7 -7 -7 0.15 dme-miR-8-3p 8mer-A1 CAGTATTA 3L 235287 235294 - 3L_235287_235294_- 0.671578105 0.671583521 0.671580813 3.82E-06 E(bx) FBtr0332101 233924 236879 3L - 235257 235315 3'utr E(bx) FlyBase G32859.1 TTGGTTCCATGGGGATTGTGTCAGTATTACCGAGGAAGCTTCTAAAAAACTATCGGAGT 76 235295 0.983374433 8 72 541 0.941860465 1.908485019 0.546511628 0.105263158 0.209302326 76 5 0 81 3L:235257-235315 8 E(bx) FBtr0332101 233924 236879 CAGTATTA 8mer-A1 dme-miR-8-3p 3L - 235271 235340 3'utr E(bx) FlyBase G24848.1 ACGTGGGGTGCGACTTGTGCAGCAATTGGTTCCATGGGGATTGTGTCAGTATTACCGAGGAAGCTTCTAA 46 235295 0.708453638 9 40 329 0.811594203 1.146128036 0.608695652 0.391304348 0.594202899 46 10 3 56 3L:235271-235340 8 56.5 2176 FBgn0000541 5641.79 79.62333333 122.1466667 0.010014552 0.709590991 0.462558673 1 1 1 0.15 dme-miR-79-3p 8mer-A1 TAGCTTTA 3L 2367921 2367928 - 3L_2367921_2367928_- 0.618122804 0.606376906 0.612249855 0.008305606 CG1317 FBtr0345587 2367841 2368638 3L - 2367910 2367944 3'utr CG1317 FlyBase G33670.1 ATGAACATTTTCGAGTTAGCTTTACGAACTGTAAA 24 2367929 0.799773147 2 23 191 0.964285714 1.130333768 0.035714286 0.166666667 0.285714286 24 0 1 27 3L:2367910-2367944 8 CG1317 FBtr0345587 2367841 2368638 TAGCTTTA 8mer-A1 dme-miR-79-3p 3L - 2367902 2367980 3'utr CG1317 FlyBase G25462.1 AAGTGGTGAAAAATGAATGGATAGTGGAATAGAAAAATGAACATTTTCGAGTTAGCTTTACGAACTGTAAAAATTACAT 14 2367929 0.980145012 5 14 101 1 1.361727836 0.217391304 0.5 0.695652174 14 0 0 23 3L:2367902-2367980 8 17.5 2177 FBgn0035333 712.6366667 22.14333333 33.55333333 0.024556693 0.790305585 0.521557719 1 1 1 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 3L 2368137 2368142 - 3L_2368137_2368142_- 0.978870716 0.988556212 0.983713464 0.006848683 CG1317 FBtr0072901|FBtr0300773|FBtr0345587 2368012|2368012|2367841 2368638|2368638|2368638 3L - 2368067 2368154 3'utr CG1317 FlyBase G33671.2 TTGTATGATATTTTGACTTCCGCCACATCCTTACAAGCACTTACAGAACTAAACGATGGGCAGCGATTAAACCTTGTATTAGAGACGT 16 2368137 0.807679161 9 14 96 0.954545455 1.322219295 0.181818182 0.375 0.545454545 16 1 0 21 3L:2368067-2368154 6 CG1317 FBtr0300773|FBtr0345587|FBtr0072901 2368012|2367841|2368012 2368638|2368638|2368638 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 2368070 2368145 3'utr CG1317 FlyBase G25464.1 ATTTTGACTTCCGCCACATCCTTACAAGCACTTACAGAACTAAACGATGGGCAGCGATTAAACCTTGTATTAGAGA 6 2368137 0.982231392 5 6 41 1 1.041392685 0.090909091 0.333333333 0.636363636 6 0 0 11 3L:2368070-2368145 6 6 2178 FBgn0035333 712.6366667 22.14333333 33.55333333 0.008419438 0.270961915 0.178819789 -5 -5 -5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 2368250 2368255 - 3L_2368250_2368255_- 0.853968162 0.736054685 0.795011424 0.083377435 CG1317 FBtr0072901|FBtr0300773|FBtr0345587 2368012|2368012|2367841 2368638|2368638|2368638 3L - 2368205 2368263 3'utr CG1317 FlyBase G33672.1 ATAGCTTAGTACCTTTGTTTTCCCAATCTTATTATCCTTTGCAATACGATTAATTTGTT 5 2368248 0.994454976 2 4 57 0.857142857 0.77815125 0.142857143 0.2 0.428571429 5 1 0 6 3L:2368205-2368263 6 CG1317 FBtr0300773|FBtr0345587|FBtr0072901 2368012|2367841|2368012 2368638|2368638|2368638 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L - 2368240 2368309 3'utr CG1317 FlyBase G25465.2 TATCTATTGCTCTGCGTTACGCAAGGATTTGGATTTGGATTTCGTTATAGCTTAGTACCTTTGTTTTCCC 9 2368248 0.992582761 4 6 81 0.9375 1.176091259 0.375 0.444444444 0.6875 9 1 0 15 3L:2368240-2368309 6 5 2179 FBgn0035333 712.6366667 22.14333333 33.55333333 0.007016198 0.225801596 0.149016491 -7 -7 -7 0.15 dme-miR-282-5p 7mer-A1 GAGGCTA 3L 2368550 2368556 - 3L_2368550_2368556_- 0.820488236 0.820489601 0.820488918 9.90E-07 CG1317 FBtr0072901 2368012 2368638 3L - 2368533 2368575 3'utr CG1317 FlyBase G33673.1 AATAAATTATCAGCTCATGGAGGCTATTAGGTTCTCACGTTTA 129 2368558 0.913325701 6 126 996 0.981707317 1.90579588 0.018292683 0.209302326 0.37804878 129 2 1 161 3L:2368533-2368575 7 CG1317 FBtr0072901 2368012 2368638 GAGGCTA 7mer-A1 dme-miR-282-5p 3L - 2368531 2368595 3'utr CG1317 FlyBase G25466.1 GCGACAGGAGGAGGGGAATCAATAAATTATCAGCTCATGGAGGCTATTAGGTTCTCACGTTTAAA 59 2368558 0.982214949 5 57 415 0.99009901 2 0.02970297 0.474576271 0.693069307 59 1 0 100 3L:2368531-2368595 7 92 2180 FBgn0035333 712.6366667 22.14333333 33.55333333 0.129098044 4.15474936 2.741903437 2 2 2 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 23749013 23749019 + 3L_23749013_23749019_+ 0.80021436 0.800522095 0.800368227 0.000217577 CG17698 FBtr0111166|FBtr0111166|FBtr0111166|FBtr0333913|FBtr0333913|FBtr0333913|FBtr0333914|FBtr0333914|FBtr0333914|FBtr0333912|FBtr0333912|FBtr0333912 23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858 23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058 3L + 23748928 23749036 3'utr CG17698 FlyBase G32572.1 TTGAATTTGACAGTTTCCAAAAGCCAAACACTTGAAATACTTTAAAATATTTAATTATTAGTGATTAAATTTATGTATATTTTTTTGTGATAAAAATAAATTTAGAATA 92 23749011 0.983716914 20 80 1000 0.865384615 1.255272505 0.009615385 0.130434783 0.230769231 92 10 4 90 3L:23748928-23749036 7 CG17698 FBtr0333912|FBtr0333912|FBtr0333912|FBtr0333914|FBtr0333914|FBtr0333914|FBtr0333913|FBtr0333913|FBtr0333913|FBtr0111166|FBtr0111166|FBtr0111166 23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858 23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 23748896 23749045 3'utr CG17698 FlyBase G24619.1 TTTCATAGAACAAAAAAACCAATTTTTTATTTTTGAATTTGACAGTTTCCAAAAGCCAAACACTTGAAATACTTTAAAATATTTAATTATTAGTGATTAAATTTATGTATATTTTTTTGTGATAAAAATAAATTTAGAATATTATAAAGT 80 23749011 0.993574972 18 72 894 0.90990991 1.527200119 0.036036036 0.3125 0.504504505 80 8 2 101 3L:23748896-23749045 7 76 2181 FBgn0040056 619.7966667 30.24 46.48666667 0.12262086 2.513227513 1.634877384 2 2 2 0.15 dme-miR-79-3p 7mer-m8 TAGCTTT 3L 238415 238421 - 3L_238415_238421_- 0.598528113 0.600121945 0.599325029 0.001126987 E(bx) FBtr0072523|FBtr0301349 238321|238321 239039|239039 3L - 238392 238565 3'utr E(bx) FlyBase G32865.1 TAAAAGTGTGAATACCTTATTAAATATAAGTAAATATTACATAGTGAGTAGGAAGCACATTAAGCTTATTAACTTAACAATAATCCAGACTGTCACCTAATGTTAAAAACCAAGGCAAAAGTATTAGAACAACTTTGCTCCGATTAGCTTTTCTTGCCTGAGGGACATTTGGTT 473 238422 0.909691581 28 466 4097 0.983271375 2.723455672 0.161710037 0.122621564 0.228624535 473 9 0 529 3L:238392-238565 7 E(bx) FBtr0301349|FBtr0072523 238321|238321 239039|239039 TAGCTTT 7mer-m8 dme-miR-79-3p 3L - 238397 238443 3'utr E(bx) FlyBase G24849.1 ATTAGAACAACTTTGCTCCGATTAGCTTTTCTTGCCTGAGGGACATT 120 238422 0.850697121 11 116 1171 0.970238095 2.212187604 0.178571429 0.316666667 0.511904762 120 5 0 163 3L:238397-238443 7 168 2182 FBgn0000541 5641.79 79.62333333 122.1466667 0.029777783 2.109934274 1.375395699 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 238990 238995 - 3L_238990_238995_- 0.645180585 0.697134726 0.671157655 0.036737096 E(bx) FBtr0072523|FBtr0072523|FBtr0072523|FBtr0301349|FBtr0301349|FBtr0301349 238321|238321|238321|238321|238321|238321 239039|239039|239039|239039|239039|239039 3L - 238954 239175 stop_codon E(bx) FlyBase G32869.1 AAATGGCAAACTTGGTGTTCTAGGCCCAACAAAAATATACTTGGCGGTACAGCCGGAAAATGCAGTTCAATCACAGCCACCTCCTCTAACCCCTGTTCACCAATCGGCTGCGCATCAGCAAGTGAGTAGTTTTTAGTTATAATTATAATGTAAAAGTATAAATGAGGAATAGGAACAGGACTGTGAGGGTTGCATTTGCTGATTCTCGACCGAAATGCCAAT 87 238992 0.950903422 21 85 381 0.980582524 1.703291378 0.203883495 0.149425287 0.281553398 87 1 1 101 3L:238954-239175 6 E(bx) FBtr0301349|FBtr0301349|FBtr0301349|FBtr0072523|FBtr0072523|FBtr0072523 238321|238321|238321|238321|238321|238321 239039|239039|239039|239039|239039|239039 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 238924 239014 3'utr E(bx) FlyBase G24853.1 ATGAGGAATAGGAACAGGACTGTGAGGGTTGCATTTGCTGATTCTCGACCGAAATGCCAATTTGTTTTTTGTTCCATCCTACGTTTAAGTT 36 238992 0.935286156 10 34 192 0.966666667 1.763427994 0.333333333 0.5 0.7 36 2 0 58 3L:238924-239014 6 40 2183 FBgn0000541 5641.79 79.62333333 122.1466667 0.007089948 0.502365303 0.327475166 -3 -3 -3 0.15 dme-miR-263a-5p 6mer3-8 GTGCCA 3L 2408753 2408758 + 3L_2408753_2408758_+ 0.934293411 0.952404059 0.943348735 0.012806199 CG45186 FBtr0345113|FBtr0345115|FBtr0345114 2408340|2408340|2408340 2409103|2409103|2409103 3L + 2408726 2408778 3'utr CG45186 FlyBase G27311.1 AATTAATTGTTAATTTGACTGCAACTTGTGCCAATGATTTTTATACGTTTACT 71 2408754 0.824988414 11 69 619 0.977777778 1.643452676 0.022222222 0.23943662 0.4 71 1 1 88 3L:2408726-2408778 6 CG45186 FBtr0345113|FBtr0345115|FBtr0345114 2408340|2408340|2408340 2409103|2409103|2409103 GTGCCA 6mer3-8 dme-miR-263a-5p 3L + 2408696 2408771 3'utr CG45186 FlyBase G20674.1 CTTTAACACAGTTTCCTCGTTTTCCTTCTTAATTAATTGTTAATTTGACTGCAACTTGTGCCAATGATTTTTATAC 65 2408754 0.886445758 11 61 558 0.966666667 1.638489257 0 0.292307692 0.488888889 65 2 1 87 3L:2408696-2408771 6 60 2184 FBgn0266696 1930.986667 36.99 56.66666667 0.031072198 1.622060016 1.058823529 -1 -1 -1 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 2464736 2464741 + 3L_2464736_2464741_+ 0.991696687 0.993011234 0.992353961 0.000929492 CG45186 FBtr0345103|FBtr0345085|FBtr0345087|FBtr0345110|FBtr0345092|FBtr0345111|FBtr0345100|FBtr0345094|FBtr0345099|FBtr0345096|FBtr0345109|FBtr0345088|FBtr0345102|FBtr0345095 2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302 2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849 3L + 2464713 2464762 3'utr CG45186 FlyBase G27342.1 TTATTTACATTTAAAAACGAATTGTACCTTAAACGGAATTATATTATGAT 276 2464735 0.772560124 8 269 1579 0.968299712 2.049218023 0.18443804 0.195652174 0.360230548 276 9 2 336 3L:2464713-2464762 6 CG45186 FBtr0345099|FBtr0345087|FBtr0345110|FBtr0345094|FBtr0345103|FBtr0345109|FBtr0345095|FBtr0345092|FBtr0345100|FBtr0345088|FBtr0345111|FBtr0345102|FBtr0345085|FBtr0345096 2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302 2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 2464715 2464800 3'utr CG45186 FlyBase G20700.1 ATTTACATTTAAAAACGAATTGTACCTTAAACGGAATTATATTATGATGAGTATGTATTACATTTATTATTATTATTGTAATATTT 181 2464735 0.966755891 7 180 978 0.996363636 2.437750563 0.250909091 0.397790055 0.603636364 181 1 0 274 3L:2464715-2464800 6 222.5 2185 FBgn0266696 1930.986667 36.99 56.66666667 0.115226068 6.015139227 3.926470588 1 1 1 0.15 dme-miR-263a-5p 7mer-m8 GTGCCAT 3L 2492103 2492109 + 3L_2492103_2492109_+ 0.659000072 0.65900005 0.659000061 7.07E-08 CG1146 FBtr0344219|FBtr0072921|FBtr0072923|FBtr0072922 2492069|2492069|2492069|2492069 2492613|2492613|2492613|2492613 3L + 2492089 2492160 3'utr CG1146 FlyBase G27354.1 AGGAACGTTTTATAGTGCCATCCCCCAGGGTCAGATGGAACAACCAGGTGAACTCCCATCCCAACCAGGCAT 35 2492107 0.807531554 7 33 140 0.953488372 1.612783857 0.186046512 0.228571429 0.372093023 35 2 0 41 3L:2492089-2492160 7 CG1146 FBtr0072923|FBtr0072922|FBtr0344219|FBtr0072921 2492069|2492069|2492069|2492069 2492613|2492613|2492613|2492613 GTGCCAT 7mer-m8 dme-miR-263a-5p 3L + 2492088 2492124 3'utr CG1146 FlyBase G20706.1 AAGGAACGTTTTATAGTGCCATCCCCCAGGGTCAGAT 13 2492106 0.802836265 3 13 66 1 1.322219295 0.285714286 0.461538462 0.666666667 13 0 0 21 3L:2492088-2492124 7 17 2186 FBgn0035346 752.39 49.49 76.20666667 0.022594665 0.343503738 0.223077596 -4 -3 -3.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 3L 2498967 2498972 + 3L_2498967_2498972_+ 0.948515592 0.992637292 0.970576442 0.031198753 CG45186 FBtr0345104|FBtr0345105|FBtr0345107|FBtr0345112|FBtr0345108|FBtr0345106 2498644|2498644|2498644|2498644|2498644|2498644 2499226|2499226|2499226|2499226|2499226|2499226 3L + 2498915 2498990 3'utr CG45186 FlyBase G27366.1 CTCGCTTCATTCGGTAGCTGTGCGGAGTTTGGAGTTCTTCTATTATATCGTATACCTGTACATAATATTAAGTTGA 23 2498965 0.83496995 6 20 226 0.9 1.130333768 0.2 0.217391304 0.4 23 2 1 27 3L:2498915-2498990 6 CG45186 FBtr0345112|FBtr0345107|FBtr0345105|FBtr0345104|FBtr0345106|FBtr0345108 2498644|2498644|2498644|2498644|2498644|2498644 2499226|2499226|2499226|2499226|2499226|2499226 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 3L + 2498955 2498987 3'utr CG45186 FlyBase G20715.1 TATTATATCGTATACCTGTACATAATATTAAGT 5 2498965 0.793788746 2 5 49 1 1.041392685 0 0.4 0.727272727 5 0 0 11 3L:2498955-2498987 6 9 2187 FBgn0266696 1930.986667 36.99 56.66666667 0.00466083 0.243309002 0.158823529 2 2 2 0.15 dme-miR-79-3p 8mer-A1 TAGCTTTA 3L 2507173 2507180 - 3L_2507173_2507180_- 0.625225304 0.625270589 0.625247946 3.20E-05 Spn FBtr0304620|FBtr0304614|FBtr0304619 2506569|2505243|2505243 2508306|2508306|2508306 3L - 2507159 2507248 3'utr Spn FlyBase G33690.1 GGAAGCAAGCAGCTTCAAGAGCGATTTCTATTCGTTAGCAAGTATGTCTGTGTGAATGGGCGTGATTGTAGCTTTAATTTCAATTTACTT 161 2507182 0.825294478 11 156 1527 0.972972973 1.653212514 0.324324324 0.124223602 0.237837838 161 2 3 180 3L:2507159-2507248 8 Spn FBtr0304619|FBtr0304614|FBtr0304620 2505243|2505243|2506569 2508306|2508306|2508306 TAGCTTTA 8mer-A1 dme-miR-79-3p 3L - 2507158 2507246 3'utr Spn FlyBase G25473.3 AAGCAAGCAGCTTCAAGAGCGATTTCTATTCGTTAGCAAGTATGTCTGTGTGAATGGGCGTGATTGTAGCTTTAATTTCAATTTACTTT 124 2507182 0.797884509 15 122 1181 0.985221675 2 0.325123153 0.475806452 0.679802956 124 2 1 200 3L:2507158-2507246 8 89.5 2188 FBgn0010905 2101.51 31.02666667 47.43666667 0.042588425 2.884615385 1.886726161 2 2 2 0.15 dme-miR-33-5p 8mer-A1 CAATGCAA 3L 2507289 2507296 - 3L_2507289_2507296_- 0.632817019 0.632772381 0.6327947 3.15E-05 Spn FBtr0304620|FBtr0304614|FBtr0304619 2506569|2505243|2505243 2508306|2508306|2508306 3L - 2507265 2507316 3'utr Spn FlyBase G33691.1 AGCAGTTTCAGCAGCCAAATCAATGCAAAGTGTCCACCCAAATTTGTTAAGC 148 2507297 0.962321248 3 144 624 0.976744186 2.225309282 0.081395349 0.135135135 0.255813953 148 4 0 168 3L:2507265-2507316 8 Spn FBtr0304619|FBtr0304614|FBtr0304620 2505243|2505243|2506569 2508306|2508306|2508306 CAATGCAA 8mer-A1 dme-miR-33-5p 3L - 2507270 2507340 3'utr Spn FlyBase G25474.1 TGAAATGCAGTCGGTTACATTTCGAGCAGTTTCAGCAGCCAAATCAATGCAAAGTGTCCACCCAAATTTGT 59 2507297 0.945031464 5 55 225 0.954022989 1.441956838 0.057471264 0.406779661 0.597701149 59 2 2 83 3L:2507270-2507340 8 102 2189 FBgn0010905 2101.51 31.02666667 47.43666667 0.048536528 3.287494628 2.150235402 1 1 1 0.15 dme-miR-317-5p 6mer2-7 TATCCC 3L 2507473 2507478 - 3L_2507473_2507478_- 0.999182547 0.999444634 0.999313591 0.000185333 Spn FBtr0304620|FBtr0304614|FBtr0304619 2506569|2505243|2505243 2508306|2508306|2508306 3L - 2507464 2507494 3'utr Spn FlyBase G33693.1 ACGGAACGTACTGTACTATCCCCTAAAAATT 14 2507481 0.58831537 5 14 71 1 1.255272505 0.222222222 0.214285714 0.388888889 14 0 0 18 3L:2507464-2507494 6 Spn FBtr0304619|FBtr0304614|FBtr0304620 2505243|2505243|2506569 2508306|2508306|2508306 TATCCC 6mer2-7 dme-miR-317-5p 3L - 2507416 2507497 3'utr Spn FlyBase G25475.1 TTTACGGAACGTACTGTACTATCCCCTAAAAATTAATGCTAAAGTATTGTACTGTATGCTATGCCTGAAAGTCATTTAAGTA 17 2507477 0.868674496 10 16 115 0.956521739 1.342422681 0.173913043 0.235294118 0.434782609 17 1 0 22 3L:2507416-2507497 6 10.5 2190 FBgn0010905 2101.51 31.02666667 47.43666667 0.004996407 0.338418565 0.221347762 3 -1 1 0.15 dme-miR-1012-3p 6mer2-7 TGACTA 3L 2507570 2507575 - 3L_2507570_2507575_- 0.870173394 0.999926408 0.935049901 0.091749226 Spn FBtr0304620|FBtr0304614|FBtr0304619 2506569|2505243|2505243 2508306|2508306|2508306 3L - 2507498 2507575 3'utr Spn FlyBase G33694.1 TGACTAGCGCATATTCAATAATATTCAATTCTAGATATACATATACATATGTGTGTGCAACAGTTATATGTCAAGACA 9 2507554 0.990493938 6 8 77 0.888888889 0.903089987 0 0 0 9 1 0 8 3L:2507498-2507575 6 Spn FBtr0304619|FBtr0304614|FBtr0304620 2505243|2505243|2506569 2508306|2508306|2508306 TGACTA 6mer2-7 dme-miR-1012-3p 3L - 2507537 2507597 3'utr Spn FlyBase G25476.1 ATTATTAATCTGTGTAATTTAATGACTAGCGCATATTCAATAATATTCAATTCTAGATATA 9 2507575 0.986858617 5 8 74 0.933333333 1.146128036 0.133333333 0.333333333 0.6 9 1 0 14 3L:2507537-2507597 6 3.5 2191 FBgn0010905 2101.51 31.02666667 47.43666667 0.001665469 0.112806188 0.073782587 -21 0 -10.5 0.15 dme-miR-8-3p 6mer3-8 CAGTAT 3L 2508251 2508256 - 3L_2508251_2508256_- 0.999405172 0.993788306 0.996596739 0.003971748 Spn FBtr0304617|FBtr0345046|FBtr0304613|FBtr0304620|FBtr0304618|FBtr0304616|FBtr0304615|FBtr0304621|FBtr0304614|FBtr0304619|FBtr0345047 2508045|2508045|2508045|2506569|2508045|2508045|2508045|2508045|2505243|2505243|2508045 2509405|2508306|2508306|2508306|2508306|2508306|2508306|2508306|2508306|2508306|2508306 3L - 2508214 2508308 stop_codon Spn FlyBase G33699.1 AGTTGAATTCTAGTTGATAAGCATCAAAGTAGCCAAAAACCAAAAGCATACGCAGTATATATTGTAGTCTATATACATACATGCATACACAACAC 30 2508260 0.97581507 12 29 188 0.971428571 1.531478917 0.057142857 0.166666667 0.285714286 30 1 0 34 3L:2508214-2508308 6 Spn FBtr0304619|FBtr0345047|FBtr0304621|FBtr0304614|FBtr0304620|FBtr0304618|FBtr0304617|FBtr0304616|FBtr0304615|FBtr0345046|FBtr0304613 2505243|2508045|2508045|2505243|2506569|2508045|2508045|2508045|2508045|2508045|2508045 2508306|2508306|2508306|2508306|2508306|2508306|2509405|2508306|2508306|2508306|2508306 CAGTAT 6mer3-8 dme-miR-8-3p 3L - 2508213 2508306 5'utr Spn FlyBase G25481.1 TTGAATTCTAGTTGATAAGCATCAAAGTAGCCAAAAACCAAAAGCATACGCAGTATATATTGTAGTCTATATACATACATGCATACACAACACA 16 2508246 0.976267093 10 14 89 0.782608696 1.255272505 0.043478261 0.375 0.565217391 16 5 0 18 3L:2508213-2508306 6 15.5 2192 FBgn0010905 2101.51 31.02666667 47.43666667 0.007375649 0.499570262 0.326751458 4 -10 -3 0.15 dme-miR-283-5p 6mer3-8 TGATAT 3L 25115033 25115038 - 3L_25115033_25115038_- 0.999999981 0.999998933 0.999999457 7.78E-07 MED21 FBtr0113739|FBtr0113740 25114922|25114922 25115218|25115218 3L - 25114923 25115180 3'utr MED21 FlyBase G39507.1 AAATTTAAGATAATGTATTTATTGCATTTTCGTTCGTGTTTACAGATCAAATGGGTTTTAGTATATACATATTGTTTTTATAAGTAAAGTATTTTAGCTTAATTTAGACCTAAACCATTTTGAACAGCACCTCTGACCTCGTTGATATAATTTTTATAATAATTAATTATAGTTTTAAGTTATAAAAAAAACTATATATACTTACACGTACCCCACTTTGGATTTTATGAACAAATTAAATTTATGTGCTCTAAAATA 233 25115047 0.985169696 44 212 1731 0.918149466 1.809559715 0.149466192 0.175965665 0.316725979 233 20 3 258 3L:25114923-25115180 6 MED21 FBtr0113740|FBtr0113739 25114922|25114922 25115218|25115218 TGATAT 6mer3-8 dme-miR-283-5p 3L - 25115017 25115176 3'utr MED21 FlyBase G29845.1 TTAAGATAATGTATTTATTGCATTTTCGTTCGTGTTTACAGATCAAATGGGTTTTAGTATATACATATTGTTTTTATAAGTAAAGTATTTTAGCTTAATTTAGACCTAAACCATTTTGAACAGCACCTCTGACCTCGTTGATATAATTTTTATAATAATT 141 25115047 0.725898796 26 133 967 0.9543379 1.475048246 0.210045662 0.34751773 0.579908676 141 4 6 209 3L:25115017-25115176 6 117.5 2193 FBgn0040020 302.5833333 44.85333333 68.74333333 0.388322776 2.619649227 1.709256655 9 9 9 0.15 "dme-miR-995-3p,dme-miR-998-3p" 6mer2-7 GGTGCT 3L 25115050 25115055 + 3L_25115050_25115055_+ 0.999991197 0.999959291 0.999975244 2.26E-05 Set1 FBtr0302246|FBtr0113871|FBtr0113870|FBtr0302245|FBtr0302243|FBtr0302248|FBtr0302247|FBtr0302244|FBtr0113869 25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896 25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180 3L + 25115002 25115088 3'utr Set1 FlyBase G32671.1 CTTAAAACTATAATTAATTATTATAAAAATTATATCAACGAGGTCAGAGGTGCTGTTCAAAATGGTTTAGGTCTAAATTAAGCTAAA 31 25115056 0.978840637 12 30 203 0.970588235 1.51851394 0.235294118 0.096774194 0.176470588 31 1 0 33 3L:25115002-25115088 6 Set1 FBtr0302248|FBtr0302247|FBtr0302244|FBtr0113869|FBtr0302246|FBtr0113870|FBtr0113871|FBtr0302245|FBtr0302243 25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896 25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180 GGTGCT 6mer2-7 "dme-miR-995-3p,dme-miR-998-3p" 3L + 25115023 25115089 3'utr Set1 FlyBase G24703.1 TATAAAAATTATATCAACGAGGTCAGAGGTGCTGTTCAAAATGGTTTAGGTCTAAATTAAGCTAAAA 31 25115054 0.702702687 11 27 162 0.88 1.342422681 0.26 0.451612903 0.66 31 5 1 44 3L:25115023-25115089 6 21 2194 FBgn0040022 1603.58 36.14666667 55.41666667 0.013095698 0.580966433 0.378947368 -6 -4 -5 0.15 dme-bantam-3p 6mer3-8 TGATCT 3L 25115132 25115137 + 3L_25115132_25115137_+ 0.999830433 0.999634032 0.999732232 0.000138876 Set1 FBtr0302246|FBtr0113871|FBtr0113870|FBtr0302245|FBtr0302243|FBtr0302248|FBtr0302247|FBtr0302244|FBtr0113869 25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896 25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180 3L + 25115100 25115180 3'utr Set1 FlyBase G32672.1 ATAAAAACAATATGTATATACTAAAACCCATTTGATCTGTAAACACGAACGAAAATGCAATAAATACATTATCTTAAATTT 124 25115131 0.755210737 15 121 710 0.966666667 2.161368002 0.06 0.177419355 0.32 124 5 0 145 3L:25115100-25115180 6 Set1 FBtr0302248|FBtr0302247|FBtr0302244|FBtr0113869|FBtr0302246|FBtr0113870|FBtr0113871|FBtr0302245|FBtr0302243 25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896 25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180 TGATCT 6mer3-8 dme-bantam-3p 3L + 25115108 25115166 3'utr Set1 FlyBase G24704.1 AATATGTATATACTAAAACCCATTTGATCTGTAAACACGAACGAAAATGCAATAAATAC 105 25115131 0.99295358 6 103 573 0.986842105 1.875061263 0.059210526 0.361904762 0.559210526 105 1 1 150 3L:25115108-25115166 6 102 2195 FBgn0040022 1603.58 36.14666667 55.41666667 0.063607678 2.821836961 1.840601504 1 1 1 0.15 dme-miR-999-3p 6mer3-8 AGTTAA 3L 2555890 2555895 - 3L_2555890_2555895_- 0.999882172 0.999999718 0.999940945 8.31E-05 msn FBtr0333364|FBtr0333362|FBtr0072959|FBtr0333365|FBtr0072956|FBtr0072958|FBtr0072957|FBtr0333363 2555772|2555772|2555772|2554845|2554845|2554845|2554845|2555772 2556555|2556555|2556555|2556555|2556555|2556555|2556555|2556555 3L - 2555889 2555929 3'utr msn FlyBase G33742.1 TGTCGTTTCACGATTGTGTATGATTTCGCTTACAAGTTAAA 10 2555908 0.796792999 5 10 86 1 1.204119983 0.1875 0.4 0.625 10 0 0 16 3L:2555889-2555929 6 msn FBtr0072957|FBtr0333363|FBtr0072956|FBtr0072958|FBtr0072959|FBtr0333365|FBtr0333364|FBtr0333362 2554845|2555772|2554845|2554845|2555772|2554845|2555772|2555772 2556555|2556555|2556555|2556555|2556555|2556555|2556555|2556555 AGTTAA 6mer3-8 dme-miR-999-3p 3L - 2555877 2555937 3'utr msn FlyBase G25511.1 ATTTCAAATGTCGTTTCACGATTGTGTATGATTTCGCTTACAAGTTAAACTTAAGTTGAAA 13 2555908 0.70765889 7 12 118 1 1.278753601 0.157894737 0.384615385 0.578947368 13 0 0 19 3L:2555877-2555937 6 2.5 2196 FBgn0010909 7320.6 159.8166667 245.3066667 0.000341502 0.015642924 0.010191325 13 13 13 0.15 dme-miR-980-3p 6mer3-8 GGCAGC 3L 2556488 2556493 - 3L_2556488_2556493_- 0.776173416 0.999999999 0.888086708 0.158269307 msn FBtr0333364|FBtr0333362|FBtr0072959|FBtr0333365|FBtr0072956|FBtr0072958|FBtr0072957|FBtr0333363 2555772|2555772|2555772|2554845|2554845|2554845|2554845|2555772 2556555|2556555|2556555|2556555|2556555|2556555|2556555|2556555 3L - 2556491 2556541 3'utr msn FlyBase G33747.1 AACCAATCCAATTCAATCCAATCCAATCGACGATCGATGATCGTGGCAGGC 16 2556503 0.847041539 6 13 77 0.8 1.204119983 0.05 0.1875 0.35 16 4 0 16 3L:2556491-2556541 2 msn FBtr0072957|FBtr0333363|FBtr0072956|FBtr0072958|FBtr0072959|FBtr0333365|FBtr0333364|FBtr0333362 2554845|2555772|2554845|2554845|2555772|2554845|2555772|2555772 2556555|2556555|2556555|2556555|2556555|2556555|2556555|2556555 GGCAGC 6mer3-8 dme-miR-980-3p 3L - 2556446 2556537 3'utr msn FlyBase G25515.1 AATCCAATTCAATCCAATCCAATCGACGATCGATGATCGTGGCAGGCAGCCTTCGATCGACGGCCCAGCGATCGATTTGCTCAACCGGCAAC 15 2556488 0.938673689 9 15 59 1 1.255272505 0.166666667 0.133333333 0.277777778 15 0 0 18 3L:2556446-2556537 6 4.5 2197 FBgn0010909 7320.6 159.8166667 245.3066667 0.000614704 0.028157264 0.018344385 10 -5 2.5 0.15 dme-miR-33-5p 8mer-A1 CAATGCAA 3L 2595437 2595444 + 3L_2595437_2595444_+ 0.634551835 0.62290963 0.628730732 0.008232279 dos FBtr0072926|FBtr0072927 2595045|2595045 2595590|2595590 3L + 2595284 2595471 3'utr dos FlyBase G27392.1 ATTTCTGTGTGCTGTTTTGAATCTGTAATCTGTAACCCGTATCTGAATCTATGTCGTATTCGTATTTAAATCGTGCTTCCAACACTTCCATGTTTATTGTTAAGCTTCGGAATCAAAATGTAACCATGACAAACGATCTTAGTGCTAATTTTACAATGCAAACAATTATTTTATATACGCAAGCGAAA 142 2595424 0.884786622 36 132 1197 0.933333333 1.447158031 0.116666667 0.225352113 0.388888889 142 7 5 168 3L:2595284-2595471 8 dos FBtr0072926|FBtr0072927 2595045|2595045 2595590|2595590 CAATGCAA 8mer-A1 dme-miR-33-5p 3L + 2595373 2595472 3'utr dos FlyBase G20739.2 ATGTTTATTGTTAAGCTTCGGAATCAAAATGTAACCATGACAAACGATCTTAGTGCTAATTTTACAATGCAAACAATTATTTTATATACGCAAGCGAAAT 49 2595425 0.711057503 18 44 309 0.941176471 1.329058719 0.088235294 0.285714286 0.485294118 49 2 2 64 3L:2595373-2595472 8 12.5 2198 FBgn0016794 1172.68 41.23 62.95666667 0.010659344 0.303177298 0.198549267 13 12 12.5 0.15 dme-miR-79-3p 6mer3-8 TAGCTT 3L 2595548 2595553 + 3L_2595548_2595553_+ 0.990452948 0.995273995 0.992863471 0.003409033 dos FBtr0072926|FBtr0072927 2595045|2595045 2595590|2595590 3L + 2595491 2595587 3'utr dos FlyBase G27393.1 TATATGGTAACAAATTATTTACAATTTAATAATGTAACTCGTGTGCGACACAAGCTGTAGCTTGATTTTGTGCTTTAAAAAATATATATACAATAAT 40 2595559 0.986557692 13 40 349 1 1.698970004 0.06 0.125 0.3 40 0 0 50 3L:2595491-2595587 6 dos FBtr0072926|FBtr0072927 2595045|2595045 2595590|2595590 TAGCTT 6mer3-8 dme-miR-79-3p 3L + 2595513 2595600 3'utr dos FlyBase G20740.1 AATTTAATAATGTAACTCGTGTGCGACACAAGCTGTAGCTTGATTTTGTGCTTTAAAAAATATATATACAATAATACCAATTTTGTGT 24 2595559 0.987019227 10 24 208 1 1.491361694 0.161290323 0.291666667 0.451612903 24 0 0 31 3L:2595513-2595600 6 23 2199 FBgn0016794 1172.68 41.23 62.95666667 0.019613194 0.557846228 0.365330651 -11 -11 -11 0.15 dme-bantam-3p 6mer2-7 GATCTC 3L 26226162 26226167 + 3L_26226162_26226167_+ 0.923706214 0.978099418 0.950902816 0.038461801 CG40160 FBtr0333380 26225913 26229433 3L + 26226131 26226182 3'utr CG40160 FlyBase G32715.1 GAAAACGAGTCTGTGTATATTACAAAATTGAGATCTCTGGAACTATAAAGGT 11 26226168 0.97818973 3 10 67 0.923076923 1.079181246 0.076923077 0.181818182 0.307692308 11 1 0 12 3L:26226131-26226182 6 CG40160 FBtr0333380 26225913 26229433 GATCTC 6mer2-7 dme-bantam-3p 3L + 26226152 26226177 3'utr CG40160 FlyBase G24741.1 ACAAAATTGAGATCTCTGGAACTATA 5 26226168 0.662444302 2 5 25 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3L:26226152-26226177 6 7.5 2200 FBgn0058160 1218.203333 81.38333333 124.1133333 0.006156608 0.092156461 0.06042864 -6 -6 -6 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 2641033 2641038 + 3L_2641033_2641038_+ 0.693946795 0.694404576 0.694175685 0.000323713 MEP-1 FBtr0072931|FBtr0072933|FBtr0290340|FBtr0072936|FBtr0072934|FBtr0072932|FBtr0072935 2641015|2641015|2641015|2641015|2641015|2641015|2641015 2641984|2641984|2641984|2641984|2641984|2641984|2641984 3L + 2641014 2641143 stop_codon MEP-1 FlyBase G27420.1 TAAAGAGCATGTTGGATCAACCAAAAACCTAATCTCGCAACGTTTGCAGCATTGACAGCGCTTTAACATTAGTTTCGTTTTTAAGCCGAACGCGACATTGGCGCCTCACGGTCCCGCTCCTTTACTTCTG 69 2641043 0.825875524 18 63 353 0.914634146 1.273001272 0.073170732 0.130434783 0.268292683 69 4 3 75 3L:2641014-2641143 6 MEP-1 FBtr0072935|FBtr0072932|FBtr0072934|FBtr0072936|FBtr0290340|FBtr0072933|FBtr0072931 2641015|2641015|2641015|2641015|2641015|2641015|2641015 2641984|2641984|2641984|2641984|2641984|2641984|2641984 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 2641010 2641088 stop_codon MEP-1 FlyBase G20763.1 AGATTAAAGAGCATGTTGGATCAACCAAAAACCTAATCTCGCAACGTTTGCAGCATTGACAGCGCTTTAACATTAGTTT 21 2641057 0.957728059 10 19 106 0.9375 1.477121255 0.15625 0.333333333 0.5625 21 2 0 30 3L:2641010-2641088 6 23.5 2201 FBgn0035357 2000.076667 48.38333333 74.09333333 0.01174955 0.485704444 0.317167536 -10 -24 -17 0.15 dme-miR-1012-3p 6mer2-7 TGACTA 3L 2641496 2641501 + 3L_2641496_2641501_+ 0.978747451 0.976242973 0.977495212 0.001770949 MEP-1 FBtr0072931|FBtr0072933|FBtr0290340|FBtr0072936|FBtr0072934|FBtr0072932|FBtr0072935 2641015|2641015|2641015|2641015|2641015|2641015|2641015 2641984|2641984|2641984|2641984|2641984|2641984|2641984 3L + 2641430 2641520 3'utr MEP-1 FlyBase G27422.1 ACATATATATTTAACTATATTTAAAGCATATTATGAAGAAGCCGCCAGAGCGCATCGTCAGCATGATGACTATGTAAATTAGTTAAAAACT 31 2641501 0.970555489 11 28 166 0.923076923 1.255272505 0.153846154 0.161290323 0.333333333 31 2 1 36 3L:2641430-2641520 6 MEP-1 FBtr0072935|FBtr0072932|FBtr0072934|FBtr0072936|FBtr0290340|FBtr0072933|FBtr0072931 2641015|2641015|2641015|2641015|2641015|2641015|2641015 2641984|2641984|2641984|2641984|2641984|2641984|2641984 TGACTA 6mer2-7 dme-miR-1012-3p 3L + 2641281 2641509 3'utr MEP-1 FlyBase G20765.1 TCACTTGCTGCGGCTACAGGATACGCGATACACATAACGCTAACGGCATAGATTCACTAGAGATACTAGTTACGGATTTTAGTTACATACGTTTTGGAGTGTGCACATAAGTTGAAGTTGTAGCTACTACTAAAATATACCACATACATACATATATATTTAACTATATTTAAAGCATATTATGAAGAAGCCGCCAGAGCGCATCGTCAGCATGATGACTATGTAAATT 49 2641496 0.980043356 23 43 287 0.897058824 1.484299839 0.25 0.346938776 0.529411765 49 6 1 61 3L:2641281-2641509 6 16 2202 FBgn0035357 2000.076667 48.38333333 74.09333333 0.007999693 0.330692387 0.215943855 -5 0 -2.5 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 3L 2641556 2641561 + 3L_2641556_2641561_+ 0.999026466 0.99954398 0.999285223 0.000365928 MEP-1 FBtr0072931|FBtr0072933|FBtr0290340|FBtr0072936|FBtr0072934|FBtr0072932|FBtr0072935 2641015|2641015|2641015|2641015|2641015|2641015|2641015 2641984|2641984|2641984|2641984|2641984|2641984|2641984 3L + 2641526 2641602 3'utr MEP-1 FlyBase G27423.1 ATTTATACGAGAACTACGAGTATCCAAATGTGTGTTGCAGTATGTATATACATTTTGAAAAGGTCCCCGCCCCGCAG 28 2641556 0.972607606 9 27 189 1 1.544068044 0.228571429 0.214285714 0.371428571 28 0 0 35 3L:2641526-2641602 6 MEP-1 FBtr0072935|FBtr0072932|FBtr0072934|FBtr0072936|FBtr0290340|FBtr0072933|FBtr0072931 2641015|2641015|2641015|2641015|2641015|2641015|2641015 2641984|2641984|2641984|2641984|2641984|2641984|2641984 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 2641518 2641578 3'utr MEP-1 FlyBase G20765.2 ACTAAACTATTTATACGAGAACTACGAGTATCCAAATGTGTGTTGCAGTATGTATATACAT 15 2641556 0.980043341 5 13 97 0.95 1.278753601 0.15 0.214285714 0.45 14 1 0 19 3L:2641518-2641578 6 15 2203 FBgn0035357 2000.076667 48.38333333 74.09333333 0.007499713 0.310024113 0.202447364 0 0 0 0.15 dme-bantam-3p 6mer3-8 TGATCT 3L 2641735 2641740 + 3L_2641735_2641740_+ 0.98774705 0.996879204 0.992313127 0.006457441 MEP-1 FBtr0072931|FBtr0072933|FBtr0290340|FBtr0072936|FBtr0072934|FBtr0072932|FBtr0072935 2641015|2641015|2641015|2641015|2641015|2641015|2641015 2641984|2641984|2641984|2641984|2641984|2641984|2641984 3L + 2641612 2641772 3'utr MEP-1 FlyBase G27424.1 GTGCCTCGCTTCGTTCTTCTCTCGAATCTTCTAGCTTATTTGTACGAACAGTCATGATGATGATGAGGCAGAGAGGAGGAAGTTGCATGAAGCGAAGCGTGGGGGGGAAGGACTCTTCTAAACTGATCTGAGAGACGACGAGACGTTCGACATTTTAATTT 255 2641735 0.986680811 16 241 1215 0.962837838 1.977723605 0.476351351 0.133333333 0.253378378 255 9 2 285 3L:2641612-2641772 6 MEP-1 FBtr0072935|FBtr0072932|FBtr0072934|FBtr0072936|FBtr0290340|FBtr0072933|FBtr0072931 2641015|2641015|2641015|2641015|2641015|2641015|2641015 2641984|2641984|2641984|2641984|2641984|2641984|2641984 TGATCT 6mer3-8 dme-bantam-3p 3L + 2641657 2641764 3'utr MEP-1 FlyBase G20766.1 GAACAGTCATGATGATGATGAGGCAGAGAGGAGGAAGTTGCATGAAGCGAAGCGTGGGGGGGAAGGACTCTTCTAAACTGATCTGAGAGACGACGAGACGTTCGACAT 176 2641735 0.968935979 15 167 825 0.937037037 2.102090526 0.462962963 0.392045455 0.603703704 176 16 1 253 3L:2641657-2641764 6 159 2204 FBgn0035357 2000.076667 48.38333333 74.09333333 0.079496953 3.286255598 2.145942055 0 0 0 0.15 dme-miR-14-3p 6mer3-8 AAGACT 3L 265513 265518 + 3L_265513_265518_+ 0.969778615 0.999503745 0.98464118 0.02101882 mRpL17 FBtr0310415 265443 265932 3L + 265436 265533 stop_codon mRpL17 FlyBase G26746.1 GTTCACTAATAGCTCTTTTCACTAACCGCCTGTTTATTTAGTAGATTAGCAAGCAGTTTGTCGCTTAGAATTCACGTAAGACTTAAAAGCATCTTTAT 49 265512 0.981346297 10 47 343 0.964912281 1.740362689 0.087719298 0.142857143 0.263157895 49 2 0 55 3L:265436-265533 6 mRpL17 FBtr0310415|FBtr0072503 265443|265443 265932|265596 AAGACT 6mer3-8 dme-miR-14-3p 3L + 265470 265534 3'utr mRpL17 FlyBase G20223.1 TATTTAGTAGATTAGCAAGCAGTTTGTCGCTTAGAATTCACGTAAGACTTAAAAGCATCTTTATT 26 265512 0.871114006 8 25 173 1 1.505149978 0.21875 0.153846154 0.3125 26 0 0 32 3L:265470-265534 6 21.5 2205 FBgn0035122 140.4333333 18.93666667 28.89666667 0.153097555 1.135363492 0.744030453 1 1 1 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 3L 27083335 27083340 - 3L_27083335_27083340_- 0.700713329 0.629706425 0.665209877 0.050209461 CG40228 FBtr0113841 27082089 27083460 3L - 27083316 27083426 3'utr CG40228 FlyBase G39587.1 TAAATTGCTAGAGCCCTCTAAATTATACCATAAAATAAGTTTAATACAAAAAATTTAGCATAATAGCGAGATTGAAATAAACATTTTTGACTTATTAAAATAAGCTGAACC 48 27083340 0.808217654 12 44 415 0.98245614 1.447158031 0.052631579 0.14893617 0.298245614 47 0 1 56 3L:27083316-27083426 6 CG40228 FBtr0113841 27082089 27083460 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 27083302 27083378 3'utr CG40228 FlyBase G29908.1 AAAAATTTAGCATAATAGCGAGATTGAAATAAACATTTTTGACTTATTAAAATAAGCTGAACCCATGAAATTCTAAC 31 27083340 0.988977688 9 29 281 0.958333333 1.361727836 0.041666667 0.387096774 0.604166667 31 1 1 46 3L:27083302-27083378 6 31.5 2206 FBgn0063670 550.58 55.34333333 84.84333333 0.057212394 0.569174246 0.371272542 0 0 0 0.15 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA 3L 27156053 27156060 + 3L_27156053_27156060_+ 0.594879458 0.626211459 0.610545459 0.02215507 vtd FBtr0344093 27147810 27157999 3L + 27156035 27156070 3'utr vtd FlyBase G32749.1 ATGAAACCGATGAGCAATTTGAAGAACGTGTTTTAA 8 27156045 0.80493186 3 6 37 0.666666667 0.77815125 0.333333333 0.125 0.222222222 8 3 0 6 3L:27156035-27156070 8 vtd FBtr0344093 27147810 27157999 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p 3L + 27156035 27156094 3'utr vtd FlyBase G24766.1 ATGAAACCGATGAGCAATTTGAAGAACGTGTTTTAAACAAGAGAGCCGCCCACCTTTTTA 6 27156053 0.965967021 5 5 30 0.9 0.954242509 0.4 0.333333333 0.6 6 1 0 9 3L:27156035-27156094 8 5.5 2207 FBgn0260987 2370.69 125.3933333 192.4 0.00232 0.043861981 0.028586279 8 0 4 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 2718675 2718682 - 3L_2718675_2718682_- 0.49374097 0.498716804 0.496228887 0.003518422 Mrtf FBtr0306331 2717613 2719787 3L - 2718662 2718708 3'utr Mrtf FlyBase G33796.1 CGTAAAGTAGTTAAATCCTGCGGCGTGTACTTAACGCACATTTTGTA 148 2718683 0.856178598 8 142 1096 0.963636364 2.201397124 0.218181818 0.114864865 0.206060606 148 6 0 159 3L:2718662-2718708 8 Mrtf FBtr0306331 2717613 2719787 GTACTTAA 8mer-A1 dme-miR-252-5p 3L - 2718660 2718706 3'utr Mrtf FlyBase G25564.1 TAAAGTAGTTAAATCCTGCGGCGTGTACTTAACGCACATTTTGTAAC 96 2718683 0.829986631 7 96 709 1 2.193124598 0.230769231 0.46875 0.673076923 96 0 0 156 3L:2718660-2718706 8 122 2208 FBgn0052296 573.0466667 9.693333333 14.89 0.212897146 12.58596974 8.193418402 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 27420971 27420976 + 3L_27420971_27420976_+ 0.691751782 0.989234316 0.840493049 0.210351893 Dbp80 FBtr0331783|FBtr0331783|FBtr0331783 27391041|27391041|27391041 27422159|27422159|27422159 3L + 27420943 27420981 intron-3'utr Dbp80 FlyBase G32785.1 TGCCCGTAGACCTTGATGGGATGGCTGACTGTGAAACTT 25 27420968 0.8315868 3 24 149 0.966666667 1.462397998 0.066666667 0.16 0.3 25 1 0 29 3L:27420943-27420981 6 Dbp80 FBtr0331783|FBtr0331783|FBtr0331783 27391041|27391041|27391041 27422159|27422159|27422159 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 27420955 27420987 3'utr Dbp80 FlyBase G24795.1 TTGATGGGATGGCTGACTGTGAAACTTATTTAC 7 27420968 0.773677516 3 7 44 1 1.113943352 0 0.571428571 0.769230769 7 0 0 13 3L:27420955-27420987 6 15.5 2209 FBgn0024804 412.37 35.54666667 54.31666667 0.037587603 0.436046512 0.285363608 3 3 3 0.15 dme-miR-252-5p 8mer-m1 GTACTTAG 3L 2785689 2785696 + 3L_2785689_2785696_+ 0.486163848 0.556481061 0.521322454 0.04972184 pgant6 FBtr0333442|FBtr0072972|FBtr0072973 2785657|2785657|2785657 2786010|2786010|2786010 3L + 2785618 2785738 stop_codon pgant6 FlyBase G27471.1 CGCTGGACAACTACTCGCAGGACCTCGTCCTCAGCCTGTAACCGCTGCCCTGCAATAGTATCACTTGCCATGTACTTAGAACACTTCGATGTAAATAACTAGGCTAGATAGGTTGTACGGC 208 2785688 0.978281747 15 196 1318 0.947761194 1.626682466 0.063432836 0.221153846 0.395522388 208 9 5 254 3L:2785618-2785738 8 pgant6 FBtr0072973|FBtr0333442|FBtr0072972 2785657|2785657|2785657 2786010|2786010|2786010 GTACTTAG 8mer-m1 dme-miR-252-5p 3L + 2785630 2785741 stop_codon pgant6 FlyBase G20799.1 ACTCGCAGGACCTCGTCCTCAGCCTGTAACCGCTGCCCTGCAATAGTATCACTTGCCATGTACTTAGAACACTTCGATGTAAATAACTAGGCTAGATAGGTTGTACGGCCGC 139 2785688 0.885150218 11 130 817 0.937198068 2.28780173 0.033816425 0.388489209 0.589371981 139 13 0 194 3L:2785630-2785741 8 160 2210 FBgn0035375 484.66 21.71 33.32666667 0.330128337 7.369875633 4.800960192 1 1 1 0.15 dme-miR-980-3p 6mer3-8 GGCAGC 3L 2786872 2786877 - 3L_2786872_2786877_- 0.959839713 0.964358874 0.962099293 0.003195557 Tet FBtr0309120|FBtr0309118|FBtr0333880|FBtr0309119|FBtr0309117|FBtr0333881 2786205|2786485|2786205|2786485|2786205|2786485 2788549|2788549|2788549|2788549|2788549|2788549 3L - 2786797 2786955 3'utr Tet FlyBase G33824.1 AATTGTTGTATAAAACTCAATGAATAATTTGCATCCATCCAAAAGGTAACATACAATTAAAGATTAGAATGCAAATGTGGCAGCGCAACTGAATTTCAAATCAAATTAGTCTACATATACATATAAATATATTTTGCACAAAATAAAACAGAAGAGCGG 90 2786879 0.954854973 25 89 417 0.990566038 1.720159303 0.160377358 0.155555556 0.283018868 90 0 1 105 3L:2786797-2786955 6 Tet FBtr0309117|FBtr0333881|FBtr0333880|FBtr0309119|FBtr0309120|FBtr0309118 2786205|2786485|2786205|2786485|2786205|2786485 2788549|2788549|2788549|2788549|2788549|2788549 GGCAGC 6mer3-8 dme-miR-980-3p 3L - 2786849 2786936 3'utr Tet FlyBase G25576.1 ATGAATAATTTGCATCCATCCAAAAGGTAACATACAATTAAAGATTAGAATGCAAATGTGGCAGCGCAACTGAATTTCAAATCAAATT 68 2786879 0.828179218 10 61 289 0.923809524 1.50965048 0.257142857 0.411764706 0.619047619 68 6 2 97 3L:2786849-2786936 6 57.5 2211 FBgn0263392 3136.83 38.19 58.6 0.018330608 1.505629746 0.981228669 2 2 2 0.15 dme-miR-8-3p 7mer-A1 AGTATTA 3L 2787007 2787013 - 3L_2787007_2787013_- 0.82299767 0.76646812 0.794732895 0.039972463 Tet FBtr0309120|FBtr0309118|FBtr0333880|FBtr0309119|FBtr0309117|FBtr0333881 2786205|2786485|2786205|2786485|2786205|2786485 2788549|2788549|2788549|2788549|2788549|2788549 3L - 2786963 2787120 3'utr Tet FlyBase G33825.1 TATATTTATTTATGCGCAAATCGACGGCAAATAAGGGGTTTAATTCTAGTTATTATTATTTCTGCAAGATTTAGTTTGAAAAACCCAAAAAGACTCGAAACCAATCAAGTATTAAGCACTAAACAACCAACAACTAATACTAAACTTATTTGCCTAAC 147 2787016 0.977716629 23 139 870 0.950819672 1.763427994 0.092896175 0.19047619 0.349726776 147 7 2 174 3L:2786963-2787120 7 Tet FBtr0309117|FBtr0333881|FBtr0333880|FBtr0309119|FBtr0309120|FBtr0309118 2786205|2786485|2786205|2786485|2786205|2786485 2788549|2788549|2788549|2788549|2788549|2788549 AGTATTA 7mer-A1 dme-miR-8-3p 3L - 2786996 2787111 3'utr Tet FlyBase G25576.3 TTATGCGCAAATCGACGGCAAATAAGGGGTTTAATTCTAGTTATTATTATTTCTGCAAGATTTAGTTTGAAAAACCCAAAAAGACTCGAAACCAATCAAGTATTAAGCACTAAACA 80 2787016 0.942573712 15 64 432 0.831858407 1.371067862 0.123893805 0.35 0.539823009 80 16 3 94 3L:2786996-2787111 7 64.5 2212 FBgn0263392 3136.83 38.19 58.6 0.02056216 1.688923802 1.100682594 3 3 3 0.15 dme-miR-305-3p 7mer-A1 TGTGCCA 3L 2788070 2788076 - 3L_2788070_2788076_- 0.77322402 0.766139488 0.769681754 0.005009498 Tet FBtr0309120|FBtr0309118|FBtr0333880|FBtr0309119|FBtr0309117|FBtr0333881 2786205|2786485|2786205|2786485|2786205|2786485 2788549|2788549|2788549|2788549|2788549|2788549 3L - 2787963 2788094 3'utr Tet FlyBase G33832.1 TAAATGCGTTTGATTTAGTGTGCCATAGGAGGAGAATTAGAAGAGTTCCCGGAAAAAGAGTTGCAGTTGAAAGAGTACAGTTGACGCTGCCGGGCCAGAGTTGTCACCATTCCACAAGAAAATATCCCAGAT 84 2788076 0.971175122 17 81 470 0.967741935 1.954242509 0.344086022 0.071428571 0.161290323 84 3 0 90 3L:2787963-2788094 7 Tet FBtr0309117|FBtr0333881|FBtr0333880|FBtr0309119|FBtr0309120|FBtr0309118 2786205|2786485|2786205|2786485|2786205|2786485 2788549|2788549|2788549|2788549|2788549|2788549 TGTGCCA 7mer-A1 dme-miR-305-3p 3L - 2788029 2788088 3'utr Tet FlyBase G25581.2 CGTTTGATTTAGTGTGCCATAGGAGGAGAATTAGAAGAGTTCCCGGAAAAAGAGTTGCAG 37 2788076 0.965970725 7 36 220 0.96969697 1.806179974 0.5 0.594594595 0.772727273 37 2 0 64 3L:2788029-2788088 7 49 2213 FBgn0263392 3136.83 38.19 58.6 0.015620866 1.283058392 0.836177474 0 0 0 0.15 dme-miR-1008-3p 6mer3-8 AGCTGT 3L 27967276 27967281 - 3L_27967276_27967281_- 0.995568986 0.965828454 0.98069872 0.021029709 CG17514 FBtr0113748 27967242 27967330 3L - 27967269 27967317 3'utr CG17514 FlyBase G39637.1 AAATCGTTCCAAAAATATCTTGAACTCTTAAAAAATAGCTGTATTTCAA 28 27967298 0.662083248 9 27 226 0.967741935 1.176091259 0 0.107142857 0.193548387 28 0 1 30 3L:27967269-27967317 6 CG17514 FBtr0113748 27967242 27967330 AGCTGT 6mer3-8 dme-miR-1008-3p 3L - 27967270 27967311 3'utr CG17514 FlyBase G29945.1 TTCCAAAAATATCTTGAACTCTTAAAAAATAGCTGTATTTCA 12 27967298 0.68082953 6 12 85 1 1.204119983 0.0625 0.333333333 0.5 12 0 0 16 3L:27967270-27967311 6 11 2214 FBgn0039959 2964.206667 45.44666667 69.68666667 0.003710942 0.242041954 0.157849421 17 17 17 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3L 304240 304245 + 3L_304240_304245_+ 0.999920698 0.99975656 0.999838629 0.000116036 RhoGEF3 FBtr0333956|FBtr0333962|FBtr0333952 303882|303882|303882 304315|305292|305292 3L + 304219 304281 5'utr RhoGEF3 FlyBase G26760.1 ATATAAAAATGTCGCCGACTGCTAGTCTAAAATCCTGTCCATACTTGTAATTTTAGGTTACGT 166 304240 0.784507104 11 162 1013 0.98019802 2.29666519 0.04950495 0.198795181 0.341584158 166 4 0 198 3L:304219-304281 6 RhoGEF3 FBtr0333952|FBtr0333962|FBtr0333956 303882|303882|303882 305292|305292|304315 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3L + 304213 304282 5'utr RhoGEF3 FlyBase G20229.1 AGTTTTATATAAAAATGTCGCCGACTGCTAGTCTAAAATCCTGTCCATACTTGTAATTTTAGGTTACGTG 144 304240 0.764155675 9 138 859 0.966824645 2.309630167 0.037914692 0.347222222 0.55450237 144 7 0 204 3L:304213-304282 6 150 2215 FBgn0264707 2055.463333 66.05 101.8633333 0.072976247 2.271006813 1.472561275 0 0 0 0.15 dme-miR-1007-3p 6mer2-7 GAGCTT 3L 3051618 3051623 + 3L_3051618_3051623_+ 0.980715484 0.973297969 0.977006726 0.005244965 CG32485 FBtr0072985 3051513 3051765 3L + 3051479 3051637 stop_codon CG32485 FlyBase G27518.1 TACCTCATCCCCGACATCCTGCCAACGGACATGTAAGGCTTCCGCCACGAAATCAGCATCCGACGAGGCTTCTGCTAGGCGTAGACATATCTCCAAAGAGAACCGAAACCAGTACCTAAGTTTGCAAGGAGGCTTCTGAGAGCTTTTATCCAGTATAGT 52 3051614 0.954857614 13 52 241 1 1.770852012 0.338983051 0.134615385 0.237288136 52 0 0 59 3L:3051479-3051637 6 CG32485 FBtr0072985 3051513 3051765 GAGCTT 6mer2-7 dme-miR-1007-3p 3L + 3051481 3051642 stop_codon CG32485 FlyBase G20831.1 CCTCATCCCCGACATCCTGCCAACGGACATGTAAGGCTTCCGCCACGAAATCAGCATCCGACGAGGCTTCTGCTAGGCGTAGACATATCTCCAAAGAGAACCGAAACCAGTACCTAAGTTTGCAAGGAGGCTTCTGAGAGCTTTTATCCAGTATAGTACTCT 38 3051615 0.972591559 13 35 211 0.85 1.707570176 0.15 0.447368421 0.65 38 9 0 51 3L:3051481-3051642 6 15 2216 FBgn0052485 128.92 14.17333333 21.81 0.116351226 1.058325494 0.687757909 4 3 3.5 0.15 dme-miR-305-5p 8mer-m1 AGTACAAT 3L 3051708 3051715 + 3L_3051708_3051715_+ 0.569879286 0.569498162 0.569688724 0.000269478 CG32485 FBtr0072985 3051513 3051765 3L + 3051646 3051720 3'utr CG32485 FlyBase G27519.1 TGTAAATCGATGTGTTTAACAAGTTGATTGTAAAGCGTATTCTATTGGACACCACAACTATTAGTACAATGCTAA 34 3051706 0.982885938 8 30 229 0.875 1.243038049 0.05 0.147058824 0.275 34 4 1 35 3L:3051646-3051720 8 CG32485 FBtr0072985 3051513 3051765 AGTACAAT 8mer-m1 dme-miR-305-5p 3L + 3051679 3051719 3'utr CG32485 FlyBase G20832.1 AGCGTATTCTATTGGACACCACAACTATTAGTACAATGCTA 14 3051706 0.674387683 5 14 88 1 1.397940009 0 0.5 0.72 14 0 0 25 3L:3051679-3051719 8 20 2217 FBgn0052485 128.92 14.17333333 21.81 0.155134967 1.411100659 0.917010546 2 2 2 0.15 dme-bantam-3p 8mer-A1 TGATCTCA 3L 3056302 3056309 - 3L_3056302_3056309_- 0.630686495 0.630832989 0.630759742 0.000103591 CG32486 FBtr0073004 3055906 3056724 3L - 3056250 3056499 3'utr CG32486 FlyBase G33920.1 GCAGACGTAACGCGGTAGGTTGTAACCTAAGTTTAGTGTAGATTCGGCTACATTTTGTACATGAGATGAGATAGCGCCATTTTATGGAGACACCTTTCAATAGCTATGTTAACTCTACTGTTAGTGCTGGTGGCGAAATGGATACGATACGATGGACAAGACGACTGATGTGTGTTTGACTAGCGTTTAATGATCTCACAGGAAGGAGCCAGCCCACGCTAACGCGATAATACCGATAATAACCATAAAA 543 3056309 0.820477851 36 523 3349 0.963549921 2.005752329 0.272583201 0.136279926 0.256735341 543 18 5 608 3L:3056250-3056499 8 CG32486 FBtr0073004 3055906 3056724 TGATCTCA 8mer-A1 dme-bantam-3p 3L - 3056260 3056469 3'utr CG32486 FlyBase G25647.1 GTTTAGTGTAGATTCGGCTACATTTTGTACATGAGATGAGATAGCGCCATTTTATGGAGACACCTTTCAATAGCTATGTTAACTCTACTGTTAGTGCTGGTGGCGAAATGGATACGATACGATGGACAAGACGACTGATGTGTGTTTGACTAGCGTTTAATGATCTCACAGGAAGGAGCCAGCCCACGCTAACGCGATAATACCGATAAT 344 3056309 0.976287521 32 326 2093 0.955637708 1.868392503 0.210720887 0.398255814 0.617375231 344 18 6 517 3L:3056260-3056469 8 365 2218 FBgn0266918 501.6666667 25.67666667 39.09333333 0.727574751 14.21524082 9.336630286 0 0 0 0.15 dme-miR-305-3p 6mer3-8 ATGTGC 3L 3056653 3056658 - 3L_3056653_3056658_- 0.917585144 0.917167081 0.917376112 0.000295571 CG32486 FBtr0073004 3055906 3056724 3L - 3056632 3056745 stop_codon CG32486 FlyBase G33921.2 ATGTTTCTGCTGAACAAGTAGACGCTTTCGCTGCTCAGCGAACTAAGATTTTCAAATTAGCTTAAGTTTGTTGTTTCAAACTCTTGAATGTGCAAAACCTAGATATAGTTGACT 148 3056661 0.973119223 18 134 1056 0.920731707 1.701855693 0.231707317 0.101351351 0.18902439 148 11 2 151 3L:3056632-3056745 6 CG32486 FBtr0073004 3055906 3056724 ATGTGC 6mer3-8 dme-miR-305-3p 3L - 3056633 3056701 3'utr CG32486 FlyBase G25649.1 AAGATTTTCAAATTAGCTTAAGTTTGTTGTTTCAAACTCTTGAATGTGCAAAACCTAGATATAGTTGAC 58 3056660 0.804554754 6 40 444 0.677777778 1.183269844 0.266666667 0.379310345 0.6 58 26 3 61 3L:3056633-3056701 6 61 2219 FBgn0266918 501.6666667 25.67666667 39.09333333 0.121594684 2.37569778 1.560368349 3 2 2.5 0.15 dme-miR-252-5p 6mer3-8 GTACTT 3L 305714 305719 - 3L_305714_305719_- 0.843545845 0.968441285 0.905993565 0.088314455 fwd FBtr0072516 305391 306358 3L - 305697 305751 3'utr fwd FlyBase G32951.1 TTGAAATGTTTGAGTCGCTGTCCGCTGTGTTTGTACTTGCATATTTAACTAAGTA 33 305721 0.654926989 11 30 320 0.911111111 1.010723865 0.355555556 0.303030303 0.488888889 33 1 3 41 3L:305697-305751 6 fwd FBtr0072516 305391 306358 GTACTT 6mer3-8 dme-miR-252-5p 3L - 305677 305741 3'utr fwd FlyBase G24938.1 TGAGTCGCTGTCCGCTGTGTTTGTACTTGCATATTTAACTAAGTAAACGAAAAAATAAATCCCAA 22 305721 0.986996608 5 20 173 0.942857143 1.51851394 0.485714286 0.409090909 0.628571429 22 2 0 33 3L:305677-305741 6 23.5 2220 FBgn0004373 1952.316667 35.47333333 54.29333333 0.012036982 0.662469461 0.432833988 2 2 2 0.15 dme-miR-1003-3p 7mer-A1 TGTGAGA 3L 306060 306066 - 3L_306060_306066_- 0.590248406 0.598382026 0.594315216 0.005751324 fwd FBtr0072516 305391 306358 3L - 306000 306106 3'utr fwd FlyBase G32954.1 AAGAGAAAAGTGTAAATGCCGAGTGTAATTTTAGTTTGCCTGTGAGAGATCGCGAGACACTCGCTATTCCATTTTGAAATTCATAATTTACATGTACATTTGTGCAC 31 306090 0.98726957 7 28 243 0.885714286 0.792391689 0.114285714 0.129032258 0.228571429 31 0 4 31 3L:306000-306106 7 fwd FBtr0072516 305391 306358 TGTGAGA 7mer-A1 dme-miR-1003-3p 3L - 306042 306099 3'utr fwd FlyBase G24941.1 AAGTGTAAATGCCGAGTGTAATTTTAGTTTGCCTGTGAGAGATCGCGAGACACTCGCT 20 306065 0.82699994 8 17 160 0.884615385 1.06069784 0.192307692 0.25 0.423076923 20 2 1 23 3L:306042-306099 7 14.5 2221 FBgn0004373 1952.316667 35.47333333 54.29333333 0.007427074 0.408757752 0.26706778 24 -1 11.5 0.15 dme-miR-14-3p 6mer3-8 AAGACT 3L 3090350 3090355 + 3L_3090350_3090355_+ 0.999999489 0.999998995 0.999999242 3.54E-07 CG11486 FBtr0332113|FBtr0073000|FBtr0072998|FBtr0072994 3088301|3088301|3088301|3088301 3090406|3090406|3090406|3090406 3L + 3090328 3090370 3'utr CG11486 FlyBase G27542.1 AAATTATTGTGTACATCAACGTAAGACTAATTATTTAATTGAA 11 3090349 0.836169669 5 10 83 0.909090909 1 0.181818182 0 0 11 1 0 10 3L:3090328-3090370 6 CG11486 FBtr0332113|FBtr0072994|FBtr0072998|FBtr0073000 3088301|3088301|3088301|3088301 3090406|3090406|3090406|3090406 AAGACT 6mer3-8 dme-miR-14-3p 3L + 3090328 3090366 3'utr CG11486 FlyBase G20855.1 AAATTATTGTGTACATCAACGTAAGACTAATTATTTAAT 9 3090349 0.849205586 3 8 75 0.857142857 1.079181246 0 0.555555556 0.714285714 9 2 0 12 3L:3090328-3090366 6 9.5 2222 FBgn0035397 2018.183333 59.24333333 91.30666667 0.004707204 0.160355596 0.104044977 1 1 1 0.15 dme-miR-33-5p 7mer-m8 CAATGCA 3L 3115152 3115158 - 3L_3115152_3115158_- 0.652610893 0.632703564 0.642657229 0.014076587 prominin-like FBtr0073118|FBtr0306258 3114557|3114448 3115919|3115919 3L - 3115130 3115229 3'utr prominin-like FlyBase G33926.1 AAATATGATCCAAAATACCAAAACTGCCATTTTAATTTAGAAAAGAGCAGAGCACAGAGTTGGGAGTTATTCAATGCATTTAATGTATTTATTTTAGAAA 41 3115159 0.755576246 14 38 341 0.933333333 1.322219295 0.244444444 0.097560976 0.177777778 41 2 1 42 3L:3115130-3115229 7 prominin-like FBtr0306258|FBtr0073118 3114448|3114557 3115919|3115919 CAATGCA 7mer-m8 dme-miR-33-5p 3L - 3115138 3115224 3'utr prominin-like FlyBase G25655.1 TGATCCAAAATACCAAAACTGCCATTTTAATTTAGAAAAGAGCAGAGCACAGAGTTGGGAGTTATTCAATGCATTTAATGTATTTAT 23 3115159 0.860197531 9 23 182 1 1.579783597 0.289473684 0.391304348 0.631578947 23 0 0 38 3L:3115138-3115224 7 15.5 2223 FBgn0026189 6878.313333 173.88 267.93 0.002253459 0.089141937 0.057850931 1 1 1 0.15 dme-miR-79-3p 7mer-A1 AGCTTTA 3L 3115409 3115415 - 3L_3115409_3115415_- 0.823315756 0.520916184 0.67211597 0.213828808 prominin-like FBtr0073118|FBtr0073120|FBtr0306258|FBtr0337056|FBtr0073119 3114557|3115333|3114448|3115333|3115333 3115919|3115919|3115919|3115919|3115919 3L - 3115381 3115465 3'utr prominin-like FlyBase G33927.1 GATGAGTCCCTTGAAGAAGTTGGCCATTCGCCGGGTCGCACGGCCGCAGAAGCTTTAAGGAATCTCATAATTTTATTATGCACAC 34 3115398 0.814270906 11 30 220 0.886363636 1.591064607 0.454545455 0.205882353 0.386363636 34 5 0 39 3L:3115381-3115465 7 prominin-like FBtr0073119|FBtr0337056|FBtr0306258|FBtr0073120|FBtr0073118 3115333|3115333|3114448|3115333|3114557 3115919|3115919|3115919|3115919|3115919 AGCTTTA 7mer-A1 dme-miR-79-3p 3L - 3115349 3115445 3'utr prominin-like FlyBase G25656.1 TGGCCATTCGCCGGGTCGCACGGCCGCAGAAGCTTTAAGGAATCTCATAATTTTATTATGCACACACTCAGAGCAGGCGAGACATACCCAAAAAGGA 28 3115398 0.973783479 9 24 149 0.880952381 1.568201724 0.285714286 0.357142857 0.571428571 28 5 0 37 3L:3115349-3115445 7 17.5 2224 FBgn0026189 6878.313333 173.88 267.93 0.002544228 0.100644122 0.065315567 -17 -17 -17 0.15 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3L 3154257 3154263 + 3L_3154257_3154263_+ 0.543862027 0.595034207 0.569448117 0.03618421 BtbVII FBtr0307305|FBtr0307302|FBtr0332096|FBtr0307304 3153532|3153532|3153532|3153532 3154934|3154934|3154934|3155678 3L + 3154202 3154308 3'utr BtbVII FlyBase G27568.1 TTATTAGTGTTAATCGCGAACATCAAATGATTTGTAAGCAACTGCAGCTAAAAAGTGGTGCTGTGTGCCAGCAGCCGACACAAACCTTGCGGAATCCGCTCCATATT 24 3154228 0.973050746 10 24 140 1 1.414973348 0.153846154 0.083333333 0.153846154 24 0 0 26 3L:3154202-3154308 7 BtbVII FBtr0332096|FBtr0307304|FBtr0307302|FBtr0307305 3153532|3153532|3153532|3153532 3154934|3155678|3154934|3154934 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3L + 3154216 3154294 3'utr BtbVII FlyBase G20874.1 CGCGAACATCAAATGATTTGTAAGCAACTGCAGCTAAAAAGTGGTGCTGTGTGCCAGCAGCCGACACAAACCTTGCGGA 19 3154257 0.826023829 7 17 86 0.935483871 1.462397998 0.225806452 0.526315789 0.709677419 19 2 0 29 3L:3154216-3154294 7 10.5 2225 FBgn0263108 1294.493333 34.92 53.58666667 0.008111282 0.300687285 0.195944265 29 0 14.5 0.15 dme-miR-986-5p 6mer3-8 ATTCGA 3L 3184670 3184675 + 3L_3184670_3184675_+ 0.942528477 0.735053409 0.838790943 0.14670705 Girdin FBtr0332097|FBtr0073036|FBtr0332098|FBtr0332099|FBtr0073035 3184665|3184270|3184270|3184665|3184665 3185287|3185287|3185287|3185287|3185287 3L + 3184614 3184693 stop_codon Girdin FlyBase G27614.1 AGCGGACCGAAGACAAGAGCAATAGCATCTGGTATGAGTACGGCTGCGTCTAGATCATTCGAACAGTATACGTCCACAAC 28 3184680 0.944426751 10 28 114 1 1.505149978 0 0.142857143 0.25 28 0 0 32 3L:3184614-3184693 6 Girdin FBtr0073035|FBtr0332098|FBtr0332099|FBtr0332097|FBtr0073036 3184665|3184270|3184665|3184665|3184270 3185287|3185287|3185287|3185287|3185287 ATTCGA 6mer3-8 dme-miR-986-5p 3L + 3184639 3184693 stop_codon Girdin FlyBase G20900.1 CATCTGGTATGAGTACGGCTGCGTCTAGATCATTCGAACAGTATACGTCCACAAC 24 3184681 0.94474195 6 22 99 0.928571429 1.591064607 0.047619048 0.5 0.714285714 24 3 0 39 3L:3184639-3184693 6 24 2226 FBgn0035411 1033.61 24.37 37.36 0.02321959 0.984817398 0.642398287 -10 -11 -10.5 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 3L 3184710 3184716 + 3L_3184710_3184716_+ 0.616654491 0.617633421 0.617143956 0.000692187 Girdin FBtr0332097|FBtr0073036|FBtr0332098|FBtr0332099|FBtr0073035 3184665|3184270|3184270|3184665|3184665 3185287|3185287|3185287|3185287|3185287 3L + 3184695 3184737 3'utr Girdin FlyBase G27615.1 TGAACTCGAACATAATGCATTTGCTGACGAAGTATTATTTCGT 56 3184712 0.665012073 9 54 359 0.953125 1.785329835 0.28125 0.125 0.234375 56 3 0 61 3L:3184695-3184737 7 Girdin FBtr0073035|FBtr0332098|FBtr0332099|FBtr0332097|FBtr0073036 3184665|3184270|3184665|3184665|3184270 3185287|3185287|3185287|3185287|3185287 TGCATTT 7mer-m8 dme-miR-277-3p 3L + 3184695 3184746 3'utr Girdin FlyBase G20901.1 TGAACTCGAACATAATGCATTTGCTGACGAAGTATTATTTCGTTTTAGAAAT 51 3184714 0.647639022 7 49 329 0.957746479 1.832508913 0.197183099 0.294117647 0.492957746 51 3 0 68 3L:3184695-3184746 7 52 2227 FBgn0035411 1033.61 24.37 37.36 0.050309111 2.13377103 1.391862955 -2 -4 -3 0.15 dme-miR-92b-3p 7mer-m1 TGCAATT 3L 3198044 3198050 - 3L_3198044_3198050_- 0.746185898 0.761754207 0.753970053 0.011008451 CG32276 FBtr0073107|FBtr0073106 3197861|3197861 3198320|3198320 3L - 3197946 3198111 3'utr CG32276 FlyBase G33982.1 AAGTCCATTTAAAGCATTTTGCATTAATTGATTTAACTGTAAGCTCTGCAATGTGCATTCCTGCAATTCTCTCCTAAGCAACTGAATAATGATCCCCGATCATTTATAGGCGATAAATGCATTTTTAAGATGCTTCTCGGCGCAGTTTTAAATAGTGCAAAGTGTT 51 3198054 0.983207724 16 51 389 1 1.785329835 0.049180328 0.156862745 0.295081967 51 0 0 61 3L:3197946-3198111 7 CG32276 FBtr0073106|FBtr0073107 3197861|3197861 3198320|3198320 TGCAATT 7mer-m1 dme-miR-92b-3p 3L - 3197871 3198100 3'utr CG32276 FlyBase G25695.1 AAGCATTTTGCATTAATTGATTTAACTGTAAGCTCTGCAATGTGCATTCCTGCAATTCTCTCCTAAGCAACTGAATAATGATCCCCGATCATTTATAGGCGATAAATGCATTTTTAAGATGCTTCTCGGCGCAGTTTTAAATAGTGCAAAGTGTTAAAGCGTTGTTTTCTAATGCAAAGACGAGTAGAGAAGAAACTATGAGTACATAACAATGATGAATATATGATAAT 52 3198025 0.983662081 24 48 357 0.938271605 1.880813592 0.12345679 0.384615385 0.604938272 52 5 0 76 3L:3197871-3198100 7 20.5 2228 FBgn0047135 1536 262.94 398.89 0.013346354 0.077964555 0.051392615 4 -25 -10.5 0.15 dme-miR-283-5p 6mer3-8 TGATAT 3L 3211003 3211008 + 3L_3211003_3211008_+ 0.999999922 0.999969421 0.999984671 2.16E-05 gry FBtr0073042 3210992 3211348 3L + 3210983 3211031 stop_codon gry FlyBase G27647.1 AGAACAAGTAGGGATGATACTGATATAATGCCGCTTTAGTTTAAGTGTT 20 3211012 0.749163617 9 20 165 1 1.397940009 0.4 0.2 0.36 20 0 0 25 3L:3210983-3211031 6 gry FBtr0073042 3210992 3211348 TGATAT 6mer3-8 dme-miR-283-5p 3L + 3210970 3211029 stop_codon gry FlyBase G20931.1 CCTCTGAAGCAACAGAACAAGTAGGGATGATACTGATATAATGCCGCTTTAGTTTAAGTG 10 3211017 0.977659883 5 10 68 1 1.176091259 0.533333333 0.3 0.533333333 10 0 0 15 3L:3210970-3211029 6 12.5 2229 FBgn0035416 1009.253333 26.48 40.54 0.012385394 0.472054381 0.308337444 -9 -14 -11.5 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3L 3211167 3211173 + 3L_3211167_3211173_+ 0.521217436 0.521223816 0.521220626 4.53E-06 gry FBtr0073042 3210992 3211348 3L + 3211110 3211287 3'utr gry FlyBase G27649.1 ACATACATAAATAACTATATATTTAGAGAGTTGCATAGCGTAATACTTGAGAGTGTGTGTGATTGTATTGTATAATGTATTGTTAAATGGGCCAAGACGCACTAGACATTATTGTTAGTTGATTACGGCGTTTTAGATAAGCAGTGCTAAGTCCTGGTCAGTACCGCAAGTTGCACAT 70 3211173 0.93764961 24 66 608 0.956521739 1.467361417 0.27173913 0.2 0.391304348 70 2 2 88 3L:3211110-3211287 7 gry FBtr0073042 3210992 3211348 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 3211128 3211277 3'utr gry FlyBase G20932.1 ATATTTAGAGAGTTGCATAGCGTAATACTTGAGAGTGTGTGTGATTGTATTGTATAATGTATTGTTAAATGGGCCAAGACGCACTAGACATTATTGTTAGTTGATTACGGCGTTTTAGATAAGCAGTGCTAAGTCCTGGTCAGTACCGCA 44 3211165 0.990940311 16 38 397 0.903225806 1.271066772 0.322580645 0.318181818 0.516129032 44 4 2 56 3L:3211128-3211277 7 38.5 2230 FBgn0035416 1009.253333 26.48 40.54 0.038147013 1.453927492 0.949679329 -6 2 -2 0.15 dme-miR-33-5p 8mer-A1 CAATGCAA 3L 3220842 3220849 + 3L_3220842_3220849_+ 0.468587039 0.490831348 0.479709194 0.015729095 CG12034 FBtr0073043 3220717 3220925 3L + 3220737 3220910 3'utr CG12034 FlyBase G27653.1 AGCTCAATGCGCATTTAAAATCCACGTGTAGCGTACTATAAGCAGCGATATATGTTTGACTAGAGTTATAGCGCTCTTACTTGATCTTTTTATTCGTGTAACCGTCAATGCAATTCCATGGTCTCTTTCTGTGTAACGTCATCCATATCCCAGGAATAATAGTTCAATAAAAGT 265 3220854 0.935713125 28 257 2399 0.973214286 2.037426498 0.044642857 0.222641509 0.386904762 265 7 2 327 3L:3220737-3220910 8 CG12034 FBtr0073043 3220717 3220925 CAATGCAA 8mer-A1 dme-miR-33-5p 3L + 3220776 3220910 3'utr CG12034 FlyBase G20935.1 AAGCAGCGATATATGTTTGACTAGAGTTATAGCGCTCTTACTTGATCTTTTTATTCGTGTAACCGTCAATGCAATTCCATGGTCTCTTTCTGTGTAACGTCATCCATATCCCAGGAATAATAGTTCAATAAAAGT 153 3220854 0.735813767 25 152 1316 0.995744681 2.369215857 0.093617021 0.405228758 0.612765957 153 1 0 234 3L:3220776-3220910 8 127 2231 FBgn0035421 132.3333333 9.493333333 14.43 0.959697733 13.37780899 8.801108801 -12 -12 -12 0.15 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3L 3232405 3232410 + 3L_3232405_3232410_+ 0.984210373 0.980087216 0.982148794 0.002915543 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3232295 3232433 intron-3'utr CG11505 FlyBase G27688.1 CAGCAGTTGCCGCTGCTCGTTAGGACGCGGAAACGAGAGCAGAGGAAGGAGAGAGCAGCAGGCGATGCTTGGACCAGTTATCATATTAGTAGGCAACGACGAAGAATGAATGGTGCATACCCTTTCTCCAGCTATATTT 222 3232405 0.965250586 14 216 1141 0.974074074 2.419955748 0.096296296 0.175675676 0.322222222 222 7 0 263 3L:3232295-3232433 6 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3L + 3232333 3232429 3'utr CG11505 FlyBase G20959.1 GCAGAGGAAGGAGAGAGCAGCAGGCGATGCTTGGACCAGTTATCATATTAGTAGGCAACGACGAAGAATGAATGGTGCATACCCTTTCTCCAGCTAT 140 3232405 0.961632127 10 138 688 0.990909091 2.338456494 0.127272727 0.392857143 0.613636364 140 2 0 218 3L:3232333-3232429 6 160.5 2232 FBgn0035424 4177.206667 52.67666667 80.83333333 0.038422806 3.046889831 1.98556701 0 0 0 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3L 3232919 3232924 + 3L_3232919_3232924_+ 0.9999767 0.999856233 0.999916466 8.52E-05 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3232828 3232959 3'utr CG11505 FlyBase G27690.2 CTCATTTTTGCTTACACATCAGAACGTAATGTTTATAGCCAAAACAGAAGTACACAGATAAGAGTGCGTAGCCCACATAGCTATGTCTCTGCTAGTCTCACAGGTTAGGGTTACTTCTATTATTTAGATATA 74 3232925 0.978720204 21 72 548 0.988888889 1.949390007 0.088888889 0.148648649 0.3 74 1 0 89 3L:3232828-3232959 6 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3L + 3232837 3232943 3'utr CG11505 FlyBase G20964.1 GCTTACACATCAGAACGTAATGTTTATAGCCAAAACAGAAGTACACAGATAAGAGTGCGTAGCCCACATAGCTATGTCTCTGCTAGTCTCACAGGTTAGGGTTACTT 34 3232925 0.984246319 7 33 261 0.978723404 1.662757832 0.021276596 0.294117647 0.489361702 34 1 0 46 3L:3232837-3232943 6 37.5 2233 FBgn0035424 4177.206667 52.67666667 80.83333333 0.008977291 0.711890147 0.463917526 -6 -6 -6 0.15 dme-miR-7-5p 6mer2-7 TCTTCC 3L 3233143 3233148 + 3L_3233143_3233148_+ 0.998000094 0.997368934 0.997684514 0.000446326 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3233003 3233174 3'utr CG11505 FlyBase G27691.1 ATTGTAACATTTTAACGGATGATCTTGTTTGCGCAAGAGGGTTTTTTTTTAATTAACTTGATTATGGGGATTCTCGTACTTAGTTCACGACTTAAGGGATCCTTTACACAGACACACCTGAATACGCCTAGACTAACTTATCTTCCCCCCAGACACCGACCCGTGAATACCC 199 3233145 0.869628357 16 196 1270 0.981900452 2.336459734 0.180995475 0.095477387 0.185520362 199 4 0 217 3L:3233003-3233174 6 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 TCTTCC 6mer2-7 dme-miR-7-5p 3L + 3233109 3233171 3'utr CG11505 FlyBase G20966.1 CACAGACACACCTGAATACGCCTAGACTAACTTATCTTCCCCCCAGACACCGACCCGTGAATA 57 3233145 0.962062124 4 56 279 0.987179487 1.886490725 0.256410256 0.298245614 0.487179487 57 1 0 77 3L:3233109-3233171 6 93.5 2234 FBgn0035424 4177.206667 52.67666667 80.83333333 0.022383379 1.774979434 1.156701031 -2 -2 -2 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 3233990 3233995 + 3L_3233990_3233995_+ 0.997360682 0.997041365 0.997201023 0.000225779 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3233970 3234090 3'utr CG11505 FlyBase G27696.1 TTTCCATTCGCAACCTCACTACCAAAACGAAGAAAACCCGCGTATTATGATTATCATTCTCTTTAATTAGATGCTTATGATTATGAACCCACTGTGAACACACTGAACAATGTTTTCCCAA 42 3233987 0.842278861 13 37 219 0.888888889 1.681241237 0.074074074 0.238095238 0.407407407 42 6 0 48 3L:3233970-3234090 6 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 3233973 3234030 3'utr CG11505 FlyBase G20971.1 CCATTCGCAACCTCACTACCAAAACGAAGAAAACCCGCGTATTATGATTATCATTCTC 14 3233987 0.824402364 4 13 45 0.95 1.278753601 0.5 0.285714286 0.5 14 1 0 19 3L:3233973-3234030 6 14 2235 FBgn0035424 4177.206667 52.67666667 80.83333333 0.003351522 0.265772322 0.173195876 3 3 3 0.15 dme-miR-184-5p 7mer-A1 GATAAGA 3L 3234200 3234206 + 3L_3234200_3234206_+ 0.75572491 0.750364146 0.753044528 0.003790658 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3234188 3234231 3'utr CG11505 FlyBase G27698.1 ATATAAGAGAAGGATAAGAAAACTGAAAAATCAATATATATACA 17 3234202 0.965421836 4 17 41 1 1.361727836 0 0.352941176 0.52173913 17 0 0 23 3L:3234188-3234231 7 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 GATAAGA 7mer-A1 dme-miR-184-5p 3L + 3234185 3234230 3'utr CG11505 FlyBase G20974.1 AAAATATAAGAGAAGGATAAGAAAACTGAAAAATCAATATATATAC 15 3234202 0.918899134 5 15 40 1 1.322219295 0 0.333333333 0.523809524 15 0 0 21 3L:3234185-3234230 7 14.5 2236 FBgn0035424 4177.206667 52.67666667 80.83333333 0.003471219 0.27526419 0.179381443 -2 -2 -2 0.15 dme-miR-7-5p 6mer2-7 TCTTCC 3L 3234631 3234636 + 3L_3234631_3234636_+ 0.961693541 0.914615769 0.938154655 0.033288961 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3234548 3234682 3'utr CG11505 FlyBase G27700.2 CAGATAGTATACCTTGCTCAGTGTTTCGTCTCGTACCCGCCACACAAATGTATCTTTAAATAATTCATAGTTTATAGTTTGTATCTTCCCCTCCAAATCGATGAGAAAGACCCAATCAAACTGTAAGCCAACTAA 35 3234634 0.987690095 15 32 311 0.926829268 1.278753601 0.292682927 0.142857143 0.268292683 35 2 1 38 3L:3234548-3234682 6 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 TCTTCC 6mer2-7 dme-miR-7-5p 3L + 3234610 3234670 3'utr CG11505 FlyBase G20979.1 ATTCATAGTTTATAGTTTGTATCTTCCCCTCCAAATCGATGAGAAAGACCCAATCAAACTG 19 3234634 0.986906514 3 18 160 1 1.361727836 0.086956522 0.157894737 0.304347826 19 0 0 23 3L:3234610-3234670 6 18.5 2237 FBgn0035424 4177.206667 52.67666667 80.83333333 0.004428797 0.351199139 0.228865979 -3 -3 -3 0.15 dme-miR-307a-3p 6mer2-7 GTTGTG 3L 3234732 3234737 + 3L_3234732_3234737_+ 0.999999215 0.584613177 0.792306196 0.293722257 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3234695 3234792 3'utr CG11505 FlyBase G27701.1 ACACACACATTTCTTTGGAATGTTCTCAAATGATTTTGTTGTGCTCATCACTCACTGTCGGCTGACAACAGAAAATTATACAAAACAACACTCTACAC 19 3234751 0.99375579 11 14 156 0.714285714 1.176091259 0.095238095 0.105263158 0.19047619 19 6 0 15 3L:3234695-3234792 6 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 GTTGTG 6mer2-7 dme-miR-307a-3p 3L + 3234715 3234775 3'utr CG11505 FlyBase G20980.1 TGTTCTCAAATGATTTTGTTGTGCTCATCACTCACTGTCGGCTGACAACAGAAAATTATAC 13 3234750 0.969453362 7 13 75 1 1.255272505 0.333333333 0.307692308 0.5 13 0 0 18 3L:3234715-3234775 6 9.5 2238 FBgn0035424 4177.206667 52.67666667 80.83333333 0.002274247 0.180345504 0.117525773 -19 -18 -18.5 0.15 dme-miR-283-5p 8mer-A1 TGATATTA 3L 3234957 3234964 + 3L_3234957_3234964_+ 0.480878877 0.520759006 0.500818942 0.028199489 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3234818 3234998 3'utr CG11505 FlyBase G27702.1 TAACACACTGTACAGTTGAACCTCAATAGGGCGGACTGCGGACTGCGCCTTAGGTGAATCAATGGATGAGGAACAGCATGTGGCCAGAGTGGAGCCAGCTGTTCGTTGGCGACGTCTCCAAGCTTCCGACAATGAGATGTGATATTATGCAATTGACAAATCATCAATTGTGTGCGACAAA 77 3234963 0.973348285 23 68 461 0.903225806 1.924279286 0.193548387 0.171052632 0.322580645 76 9 0 84 3L:3234818-3234998 8 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 TGATATTA 8mer-A1 dme-miR-283-5p 3L + 3234907 3234974 3'utr CG11505 FlyBase G20982.1 TGGAGCCAGCTGTTCGTTGGCGACGTCTCCAAGCTTCCGACAATGAGATGTGATATTATGCAATTGAC 47 3234962 0.829281749 10 43 298 0.86746988 1.079181246 0.253012048 0.425531915 0.674698795 47 6 5 72 3L:3234907-3234974 8 43.5 2239 FBgn0035424 4177.206667 52.67666667 80.83333333 0.010413658 0.825792571 0.53814433 -6 -5 -5.5 0.15 dme-miR-34-5p 8mer-A1 CACTGCCA 3L 3235651 3235658 + 3L_3235651_3235658_+ 0.677970471 0.677714374 0.677842422 0.00018109 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3235547 3235663 3'utr CG11505 FlyBase G27706.2 CCTATGGAATGTGCCCCCCAACAGACCACTGTACATACCCTTAGCTATACATTTACATTTCCGGGGGCAATTTTCTCCTGATTTCATGCGATCACCTTCTTTGGCACTGCCATCAAA 30 3235647 0.98699469 12 24 209 0.823529412 1.447158031 0.088235294 0.133333333 0.235294118 30 6 0 28 3L:3235547-3235663 8 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 CACTGCCA 8mer-A1 dme-miR-34-5p 3L + 3235603 3235663 3'utr CG11505 FlyBase G20988.1 ATTTCCGGGGGCAATTTTCTCCTGATTTCATGCGATCACCTTCTTTGGCACTGCCATCAAA 16 3235647 0.984673081 8 15 124 0.95 1.278753601 0 0.25 0.4 16 1 0 19 3L:3235603-3235663 8 11 2240 FBgn0035424 4177.206667 52.67666667 80.83333333 0.002633339 0.20882111 0.136082474 4 4 4 0.15 dme-miR-14-3p 6mer2-7 AGACTG 3L 3313345 3313350 + 3L_3313345_3313350_+ 0.999991228 0.999901761 0.999946495 6.32E-05 ZnT63C FBtr0073056|FBtr0073054|FBtr0073055|FBtr0073057|FBtr0073058|FBtr0330104 3313011|3313011|3313011|3313011|3313011|3313011 3313476|3313476|3314009|3313476|3313476|3313476 3L + 3313214 3313374 stop_codon ZnT63C FlyBase G27714.1 CGGGAGCTTCAGTTGCAGGCCGAACAGCAGTATCAGGAGCAGGTGTCACCACTGAGTACCAGGAATGGCGACGAGGTGGCACTCTAATTAGGAGCCTAGTTTAACGTTAATTGTGCAAACCGCTGCAATGGAGACTGGTCTGCCATGGTGCAGCTTTCGTG 66 3313342 0.959214535 14 63 311 0.959459459 1.550228353 0.337837838 0.106060606 0.202702703 66 2 1 71 3L:3313214-3313374 6 ZnT63C FBtr0330104|FBtr0073055|FBtr0073057|FBtr0330103|FBtr0073056|FBtr0073054|FBtr0073058 3313011|3313011|3313011|3313299|3313011|3313011|3313011 3313476|3314009|3313476|3313476|3313476|3313476|3313476 AGACTG 6mer2-7 dme-miR-14-3p 3L + 3313286 3313371 stop_codon ZnT63C FlyBase G20995.1 GAGGTGGCACTCTAATTAGGAGCCTAGTTTAACGTTAATTGTGCAAACCGCTGCAATGGAGACTGGTCTGCCATGGTGCAGCTTTC 38 3313342 0.963587387 11 38 198 1 1.763427994 0.206896552 0.342105263 0.568965517 38 0 0 58 3L:3313286-3313371 6 41.5 2241 FBgn0035432 2241.986667 107.03 164.0533333 0.018510369 0.387741755 0.252966515 3 3 3 0.15 dme-bantam-3p 7mer-m8 TGATCTC 3L 3320887 3320893 + 3L_3320887_3320893_+ 0.655640614 0.661130927 0.65838577 0.003882228 CG42456 FBtr0300240 3320650 3322489 3L + 3320867 3320925 3'utr CG42456 FlyBase G27722.1 CACCATTGGCGAGGTGCGTCTGATCTCGCAGGATGACTACTTTCTGCCCGTGGAGGACA 14 3320886 0.735583011 7 12 66 0.882352941 1.176091259 0.588235294 0.142857143 0.294117647 14 2 0 15 3L:3320867-3320925 7 CG42456 FBtr0300240 3320650 3322489 TGATCTC 7mer-m8 dme-bantam-3p 3L + 3320870 3320924 3'utr CG42456 FlyBase G21003.1 CATTGGCGAGGTGCGTCTGATCTCGCAGGATGACTACTTTCTGCCCGTGGAGGAC 6 3320887 0.976263188 3 6 33 1 0.77815125 0.166666667 0 0 6 0 0 6 3L:3320870-3320924 7 6.5 2242 FBgn0259933 101.7866667 5.366666667 8.34 0.063859052 1.211180124 0.779376499 1 0 0.5 0.15 dme-miR-1008-3p 7mer-m8 AGCTGTG 3L 3322226 3322232 + 3L_3322226_3322232_+ 0.671762392 0.671775045 0.671768718 8.91E-06 CG42456 FBtr0300240 3320650 3322489 3L + 3322137 3322255 3'utr CG42456 FlyBase G27726.1 GTTATTATGGGTGACATGGTCTCTCTTGTGGAGAATGCTCTTGTAACCAGATTGTGAAATGAAGAAACTCGGTTCAGGAATTCATATTTAGCTGTGCTAACTATTATATTGTATTGTTT 147 3322224 0.820435875 21 142 1328 0.963636364 1.900367129 0.248484848 0.102040816 0.2 147 5 1 159 3L:3322137-3322255 7 CG42456 FBtr0300240 3320650 3322489 AGCTGTG 7mer-m8 dme-miR-1008-3p 3L + 3322136 3322247 3'utr CG42456 FlyBase G21005.1 AGTTATTATGGGTGACATGGTCTCTCTTGTGGAGAATGCTCTTGTAACCAGATTGTGAAATGAAGAAACTCGGTTCAGGAATTCATATTTAGCTGTGCTAACTATTATATTG 101 3322224 0.799609662 20 96 880 0.953642384 2.158362492 0.231788079 0.356435644 0.569536424 101 7 0 144 3L:3322136-3322247 7 69.5 2243 FBgn0259933 101.7866667 5.366666667 8.34 0.682800629 12.95031056 8.333333333 2 2 2 0.15 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 3370478 3370485 - 3L_3370478_3370485_- 0.605422058 0.640053541 0.6227378 0.024488098 YT521-B FBtr0073078 3370449 3371600 3L - 3370450 3370507 3'utr YT521-B FlyBase G34049.1 TGCACGAAGAAACTTAGAGAGAAAGACTGATGCCTAATAAAGACTCAAGCTGATTGCA 87 3370477 0.757700146 7 84 339 0.963302752 1.720159303 0.128440367 0.206896552 0.366972477 87 3 1 105 3L:3370450-3370507 8 YT521-B FBtr0073078 3370449 3371600 AAGACTGA 8mer-A1 dme-miR-14-3p 3L - 3370455 3370508 3'utr YT521-B FlyBase G25745.1 TTGCACGAAGAAACTTAGAGAGAAAGACTGATGCCTAATAAAGACTCAAGCTGA 75 3370494 0.904162336 5 65 274 0.87037037 1.672097858 0.231481481 0.32 0.527777778 75 13 1 94 3L:3370455-3370508 8 76 2244 FBgn0027616 901.75 38.03333333 58.06666667 0.084280566 1.998247152 1.308840413 -8 9 0.5 0.15 dme-miR-988-3p 6mer3-8 ACAAGG 3L 3377622 3377627 + 3L_3377622_3377627_+ 0.784882715 0.99679067 0.890836693 0.149841584 CG12012 FBtr0073076|FBtr0300749|FBtr0346532 3377299|3377299|3377299 3377687|3377687|3377992 3L + 3377591 3377633 3'utr CG12012 FlyBase G27790.1 GTTTTCCAATTGAATAGTGATTTGGCTTTTTACAAGGATTTTA 43 3377612 0.707040914 9 39 403 0.919354839 1.278753601 0.080645161 0.348837209 0.548387097 43 3 2 57 3L:3377591-3377633 6 CG12012 FBtr0346532|FBtr0300749|FBtr0073076 3377299|3377299|3377299 3377992|3377687|3377687 ACAAGG 6mer3-8 dme-miR-988-3p 3L + 3377589 3377632 3'utr CG12012 FlyBase G21047.1 ATGTTTTCCAATTGAATAGTGATTTGGCTTTTTACAAGGATTTT 24 3377612 0.684486737 7 24 227 1 1.477121255 0.033333333 0.208333333 0.366666667 24 0 0 30 3L:3377589-3377632 6 9.5 2245 FBgn0035444 229.66 32.33 49.26666667 0.041365497 0.293844726 0.192828146 10 10 10 0.15 dme-miR-33-5p 7mer-A1 AATGCAA 3L 3401899 3401905 - 3L_3401899_3401905_- 0.769094754 0.781630212 0.775362483 0.008863866 sty FBtr0073145 3401151 3402955 3L - 3401862 3402226 3'utr sty FlyBase G34066.2 ATTGATATGTGTATGTGTGTGTATGTTGAGGGCGACGAACTTTTCGATAAATTTAGAGCAACCTATATAGACCAGTCTAAATGTGCTTAGAAACCGATATAGATGTACTGCAAACCAAAAGTCAGTTAGTTTACTTTACCAACTACGAAGCCGGAACAAATCTGAGGAGCGAAAATATGGGATAACGAAATCGATTGCTTATGAACTTATTTTATAGTTGAAGATCGATTGGTGGGTTCGTAGTGTTTCCAGCCAGAAGCCCCAAAAATGTGAGCAAGATTGTATATATGATGAAATTTTTAAGCGAAATGCGAGATACAAAATGCAAGCAAATTCCAAATAATAGAAAAACAAAAAACAACAAA 465 3401893 0.96140427 56 446 2218 0.95840868 1.87917783 0.283905967 0.169892473 0.30198915 465 17 6 530 3L:3401862-3402226 7 sty FBtr0073145 3401151 3402955 AATGCAA 7mer-A1 dme-miR-33-5p 3L - 3401866 3402096 3'utr sty FlyBase G25761.1 TTACTTTACCAACTACGAAGCCGGAACAAATCTGAGGAGCGAAAATATGGGATAACGAAATCGATTGCTTATGAACTTATTTTATAGTTGAAGATCGATTGGTGGGTTCGTAGTGTTTCCAGCCAGAAGCCCCAAAAATGTGAGCAAGATTGTATATATGATGAAATTTTTAAGCGAAATGCGAGATACAAAATGCAAGCAAATTCCAAATAATAGAAAAACAAAAAACAA 306 3401893 0.961620028 41 283 1416 0.940042827 1.943494516 0.331905782 0.379084967 0.593147752 306 24 4 439 3L:3401866-3402096 7 156.5 2246 FBgn0014388 33951.58333 1097.95 1702.483333 0.004609505 0.142538367 0.091924542 -12 -12 -12 0.15 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 3468272 3468277 - 3L_3468272_3468277_- 0.999947749 0.999995535 0.999971642 3.38E-05 CG14971 FBtr0073143 3468021 3468780 3L - 3468234 3468302 3'utr CG14971 FlyBase G34136.1 AGAAAGCCTTAATGACCCTTTCATTGTTCCTTAACTGACATCTTTAATTTGGCATTCCAAATTGAATTG 25 3468278 0.985077068 10 23 249 0.925925926 1.397940009 0 0.08 0.148148148 25 2 0 25 3L:3468234-3468302 6 CG14971 FBtr0073143 3468021 3468780 GTTCCT 6mer2-7 dme-miR-276a-3p 3L - 3468240 3468318 3'utr CG14971 FlyBase G25817.1 AACCTATGTAAAAATAAGAAAGCCTTAATGACCCTTTCATTGTTCCTTAACTGACATCTTTAATTTGGCATTCCAAATT 23 3468279 0.988176474 10 22 206 0.939393939 1.014240439 0.03030303 0.347826087 0.545454545 23 0 2 31 3L:3468240-3468318 6 18.5 2247 FBgn0035449 481.2366667 24.29333333 37.37 0.038442624 0.761525796 0.495049505 1 2 1.5 0.15 dme-miR-184-3p 6mer3-8 TCCGTC 3L 3468626 3468631 - 3L_3468626_3468631_- 0.999928466 0.999996132 0.999962299 4.78E-05 CG14971 FBtr0073143 3468021 3468780 3L - 3468599 3468660 3'utr CG14971 FlyBase G34137.1 AGCTAGTTAGTTTGACACTCTTCATTCCTTCCGTCACCGATTCCCTCAACTTCCTCGATGCA 213 3468636 0.734454623 6 211 1698 0.992125984 2.401400541 0.106299213 0.154929577 0.291338583 213 2 0 252 3L:3468599-3468660 6 CG14971 FBtr0073143 3468021 3468780 TCCGTC 6mer3-8 dme-miR-184-3p 3L - 3468554 3468661 3'utr CG14971 FlyBase G25818.1 AAGCTAGTTAGTTTGACACTCTTCATTCCTTCCGTCACCGATTCCCTCAACTTCCTCGATGCATTCCCGCCTTGTGCATTTAGGGGCTAGGCTAGATATATGAGACGT 125 3468636 0.984114619 12 120 977 0.947368421 1.653212514 0.084210526 0.384 0.594736842 125 7 3 180 3L:3468554-3468661 6 164 2248 FBgn0035449 481.2366667 24.29333333 37.37 0.340788663 6.750823271 4.388546963 5 5 5 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA 3L 3505238 3505245 + 3L_3505238_3505245_+ 0.546573193 0.568706237 0.557639715 0.015650394 CG42324 FBtr0334633|FBtr0330142 3505096|3505096 3505316|3505316 3L + 3505190 3505251 3'utr CG42324 FlyBase G27820.1 AATCACGAAGACTGCGTTAAGTTAACAATATGATTTCGTTCCCTTGACTGCATTTAACAATC 21 3505233 0.782574145 11 21 168 1 1.397940009 0.08 0.142857143 0.28 21 0 0 25 3L:3505190-3505251 8 CG42324 FBtr0330142|FBtr0334633 3505096|3505096 3505316|3505316 TGCATTTA 8mer-A1 dme-miR-277-3p 3L + 3505171 3505246 3'utr CG42324 FlyBase G21076.1 TTTTCTAGGCAACGGATTCAATCACGAAGACTGCGTTAAGTTAACAATATGATTTCGTTCCCTTGACTGCATTTAA 19 3505232 0.990981629 10 16 159 0.869565217 1.301029996 0.086956522 0.210526316 0.347826087 19 3 0 20 3L:3505171-3505246 8 12.5 2249 FBgn0259224 58.33333333 1.43 2.216666667 0.214285714 8.741258741 5.639097744 5 6 5.5 0.15 dme-miR-7-5p 7mer-m8 GTCTTCC 3L 3508949 3508955 + 3L_3508949_3508955_+ 0.705640537 0.705298135 0.705469336 0.000242113 CG42324 FBtr0334634|FBtr0334632|FBtr0334635|FBtr0334636 3508532|3508532|3508532|3508532 3510895|3510895|3510895|3510895 3L + 3508924 3508960 3'utr CG42324 FlyBase G27838.1 TGTTCATTATATGTTACCCCTTAAAGTCTTCCTTTTC 13 3508956 0.922617944 5 10 122 0.769230769 0.698970004 0 0 0 13 2 1 10 3L:3508924-3508960 7 CG42324 FBtr0334636|FBtr0334635|FBtr0334632|FBtr0334634 3508532|3508532|3508532|3508532 3510895|3510895|3510895|3510895 GTCTTCC 7mer-m8 dme-miR-7-5p 3L + 3508913 3508961 3'utr CG42324 FlyBase G21094.1 TTTAGTATGTATGTTCATTATATGTTACCCCTTAAAGTCTTCCTTTTCA 10 3508957 0.992842402 7 9 106 0.909090909 0.698970004 0 0.1 0.181818182 10 0 1 10 3L:3508913-3508961 7 10.5 2250 FBgn0259224 58.33333333 1.43 2.216666667 0.18 7.342657343 4.736842105 -7 -8 -7.5 0.15 dme-miR-980-3p 6mer2-7 GCAGCT 3L 3509070 3509075 + 3L_3509070_3509075_+ 0.966693305 0.970761299 0.968727302 0.00287651 CG42324 FBtr0334634|FBtr0334632|FBtr0334635|FBtr0334636 3508532|3508532|3508532|3508532 3510895|3510895|3510895|3510895 3L + 3509048 3509086 3'utr CG42324 FlyBase G27839.2 AATCTGAAGCCCAACAGAAATTGCAGCTGAAATCAAAAG 18 3509068 0.809674087 2 17 60 0.95 1.278753601 0.1 0.111111111 0.2 18 1 0 19 3L:3509048-3509086 6 CG42324 FBtr0334636|FBtr0334635|FBtr0334632|FBtr0334634 3508532|3508532|3508532|3508532 3510895|3510895|3510895|3510895 GCAGCT 6mer2-7 dme-miR-980-3p 3L + 3509048 3509084 3'utr CG42324 FlyBase G21096.1 AATCTGAAGCCCAACAGAAATTGCAGCTGAAATCAAA 12 3509068 0.755389678 2 12 36 1 1.230448921 0.058823529 0.333333333 0.529411765 12 0 0 17 3L:3509048-3509084 6 14.5 2251 FBgn0259224 58.33333333 1.43 2.216666667 0.248571429 10.13986014 6.541353383 2 2 2 0.15 dme-miR-92b-3p 8mer-A1 GTGCAATA 3L 3509329 3509336 + 3L_3509329_3509336_+ 0.614367473 0.62886463 0.621616052 0.010250998 CG42324 FBtr0334634|FBtr0334632|FBtr0334635|FBtr0334636 3508532|3508532|3508532|3508532 3510895|3510895|3510895|3510895 3L + 3509187 3509350 3'utr CG42324 FlyBase G27840.1 AACCACGAGAATTCGAAAACTTTGCCCAAGCAAACTTAGGTTACACTGGAAATATATGAATTATATTTATAGGAATATATAGATAATTATGCTATATACGATTTATATTTGATAAGCGCGTTATATTTTCTACATTCCGATTGTGCAATATTTTTTGGTAGTGT 27 3509327 0.973582754 13 26 233 0.96875 1.491361694 0.125 0.074074074 0.21875 27 1 0 31 3L:3509187-3509350 8 CG42324 FBtr0334636|FBtr0334635|FBtr0334632|FBtr0334634 3508532|3508532|3508532|3508532 3510895|3510895|3510895|3510895 GTGCAATA 8mer-A1 dme-miR-92b-3p 3L + 3509315 3509348 3'utr CG42324 FlyBase G21098.1 TCTACATTCCGATTGTGCAATATTTTTTGGTAGT 9 3509327 0.842265092 2 7 92 0.705882353 1.079181246 0.117647059 0.555555556 0.764705882 9 5 0 12 3L:3509315-3509348 8 8.5 2252 FBgn0259224 58.33333333 1.43 2.216666667 0.145714286 5.944055944 3.834586466 2 2 2 0.15 dme-miR-8-3p 6mer2-7 AGTATT 3L 355982 355987 + 3L_355982_355987_+ 0.999007307 0.999477228 0.999242267 0.000332269 Ptpmeg FBtr0306560|FBtr0306562|FBtr0306563 355526|355526|355526 356050|356050|356050 3L + 355940 356000 3'utr Ptpmeg FlyBase G26774.1 GCGAACCTTATACACTGATAGACATGAGAAGATAAAACTGTTAGTATTTTAGCACCAAATC 64 355981 0.664473635 11 49 408 0.766233766 1.293730757 0.155844156 0.15625 0.298701299 64 16 2 59 3L:355940-356000 6 Ptpmeg FBtr0306562|FBtr0306563|FBtr0306560 355526|355526|355526 356050|356050|356050 AGTATT 6mer2-7 dme-miR-8-3p 3L + 355924 355998 3'utr Ptpmeg FlyBase G20239.1 AAGAGCAACCGAGAATGCGAACCTTATACACTGATAGACATGAGAAGATAAAACTGTTAGTATTTTAGCACCAAA 40 355981 0.988009629 12 29 256 0.7 1.146128036 0.1 0.325 0.55 40 16 2 42 3L:355924-355998 6 45.5 2253 FBgn0261985 1055.98 31.95666667 49.17666667 0.043087937 1.423803067 0.925235545 1 1 1 0.15 dme-miR-33-5p 7mer-A1 AATGCAA 3L 3607701 3607707 + 3L_3607701_3607707_+ 0.782908175 0.782866066 0.78288712 2.98E-05 Eip63E FBtr0302598|FBtr0073134|FBtr0110925|FBtr0110923|FBtr0110921|FBtr0110924|FBtr0330068|FBtr0073133|FBtr0073131|FBtr0110920|FBtr0073132|FBtr0073135|FBtr0110922|FBtr0301948 3607565|3607565|3607565|3607565|3607565|3607565|3607613|3607565|3607565|3607565|3607565|3607565|3607565|3607565 3610521|3608549|3608549|3608549|3608549|3610521|3608549|3608549|3608549|3608549|3608549|3608549|3608549|3608549 3L + 3607684 3607723 3'utr Eip63E FlyBase G27860.1 AATCGACAGCCATATATAATGCAAGAGGAACTTCTCGCCC 30 3607699 0.6075269 4 22 123 0.787878788 0.937852093 0.212121212 0.1 0.181818182 30 5 2 26 3L:3607684-3607723 7 Eip63E FBtr0110922|FBtr0073133|FBtr0301948|FBtr0110921|FBtr0073132|FBtr0110925|FBtr0073135|FBtr0302598|FBtr0110924|FBtr0330068|FBtr0073131|FBtr0110920|FBtr0073134|FBtr0110923 3607565|3607565|3607565|3607565|3607565|3607565|3607565|3607565|3607565|3607613|3607565|3607565|3607565|3607565 3608549|3608549|3608549|3608549|3608549|3608549|3608549|3610521|3610521|3608549|3608549|3608549|3608549|3608549 AATGCAA 7mer-A1 dme-miR-33-5p 3L + 3607667 3607836 3'utr Eip63E FlyBase G21110.1 CTATCGCATCATCCAGCAATCGACAGCCATATATAATGCAAGAGGAACTTCTCGCCCGCGCAGAAGTTTTGTACTATAATTCTATGATACTTTTTAGTTATTAGTTCGATTTCGCAGTGAGTTAGCTGAGGGAGTTTAGCAGAAGACACGGCACCAACGGCAGCATTTTA 30 3607699 0.956481142 16 29 145 0.930232558 1.602059991 0.302325581 0.4 0.581395349 30 3 0 40 3L:3607667-3607836 7 20.5 2254 FBgn0005640 1126.993333 37.81333333 57.97333333 0.018189992 0.542136812 0.353610856 2 2 2 0.15 dme-miR-79-3p 7mer-m8 TAGCTTT 3L 3615165 3615171 + 3L_3615165_3615171_+ 0.619714132 0.617027505 0.618370819 0.001899713 CG10359 FBtr0290290|FBtr0273204 3615072|3615072 3615244|3615244 3L + 3615135 3615195 3'utr CG10359 FlyBase G27866.1 AATCGATTGCTTGCATTTTAACCCTAGCTTTAGCTTTGAATCTCTCTGTGCGTGTGTGTGT 24 3615170 0.824682188 10 20 234 0.833333333 1.397940009 0.5 0.208333333 0.366666667 24 5 0 25 3L:3615135-3615195 7 CG10359 FBtr0273204|FBtr0290290 3615072|3615072 3615244|3615244 TAGCTTT 7mer-m8 dme-miR-79-3p 3L + 3615127 3615196 3'utr CG10359 FlyBase G21116.1 TAACCCACAATCGATTGCTTGCATTTTAACCCTAGCTTTAGCTTTGAATCTCTCTGTGCGTGTGTGTGTA 19 3615170 0.994499024 7 14 201 0.724137931 1.322219295 0.206896552 0.421052632 0.620689655 19 8 0 21 3L:3615127-3615196 7 14 2255 FBgn0035452 20.66666667 1.506666667 2.33 0.677419355 9.292035398 6.008583691 -5 -5 -5 0.15 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3L 3803886 3803891 - 3L_3803886_3803891_- 0.999743079 0.97351111 0.986627094 0.018548825 ntc FBtr0073185 3803830 3803958 3L - 3803858 3803899 5'utr ntc FlyBase G34155.1 TTATTAAGTGGTGCATAAAGATTCTCGGGAATCATTGTATGT 5 3803878 0.908524541 2 5 45 1 0.698970004 0 0 0 5 0 0 5 3L:3803858-3803899 6 ntc FBtr0073185 3803830 3803958 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3L - 3803866 3803899 5'utr ntc FlyBase G25834.1 TTATTAAGTGGTGCATAAAGATTCTCGGGAATCA 5 3803891 0.785204915 2 5 35 1 0.954242509 0 0.4 0.666666667 5 0 0 9 3L:3803866-3803899 6 5 2256 FBgn0035461 62.16 4.68 6.936666667 0.08043758 1.068376068 0.720807304 -13 0 -6.5 0.15 dme-miR-304-5p 8mer-A1 TGAGATTA 3L 3813693 3813700 + 3L_3813693_3813700_+ 0.625351032 0.625356861 0.625353947 4.17E-06 CG12006 FBtr0073150|FBtr0073149 3813623|3813623 3813958|3813958 3L + 3813605 3813717 stop_codon CG12006 FlyBase G27872.1 ACGAGAATCTGTTCAATTAGATAATAGAGAAAATAAGAGAACCCACCACCGACGCCCTCCGTTCAAAAGCAAGAAGCAATGACACATTTGAGATTAACTAATAGATACAAACC 53 3813692 0.999859162 8 51 308 0.970149254 1.812913357 0.059701493 0.226415094 0.388059701 53 2 0 65 3L:3813605-3813717 8 CG12006 FBtr0073149|FBtr0073150 3813623|3813623 3813958|3813958 TGAGATTA 8mer-A1 dme-miR-304-5p 3L + 3813564 3813704 stop_codon CG12006 FlyBase G21121.1 CGATCATCCGCCGCTGGAGGATCTCGTCCTGGCCAACGAGAACGAGAATCTGTTCAATTAGATAATAGAGAAAATAAGAGAACCCACCACCGACGCCCTCCGTTCAAAAGCAAGAAGCAATGACACATTTGAGATTAACTA 25 3813692 0.974048468 8 22 122 0.875 1.06694679 0.1 0.48 0.675 25 3 2 35 3L:3813564-3813704 8 27 2257 FBgn0035464 622.06 34.45666667 52.80333333 0.043404173 0.783592919 0.511331355 1 1 1 0.15 dme-bantam-3p 6mer2-7 GATCTC 3L 3813928 3813933 + 3L_3813928_3813933_+ 0.999750347 0.999254194 0.99950227 0.000350796 CG12006 FBtr0073150|FBtr0073149 3813623|3813623 3813958|3813958 3L + 3813906 3813951 3'utr CG12006 FlyBase G27874.1 ACTTGATCTGTCCTTTCTTTAAGATCTCGAAATAAAGGTTCAGTGG 15 3813924 0.981148013 4 14 134 0.894736842 0.753327667 0.052631579 0.133333333 0.315789474 15 0 2 17 3L:3813906-3813951 6 CG12006 FBtr0073149|FBtr0073150 3813623|3813623 3813958|3813958 GATCTC 6mer2-7 dme-bantam-3p 3L + 3813913 3813938 3'utr CG12006 FlyBase G21124.1 CTGTCCTTTCTTTAAGATCTCGAAAT 12 3813924 0.699683245 4 12 96 1 1.255272505 0 0.333333333 0.555555556 12 0 0 18 3L:3813913-3813938 6 13.5 2258 FBgn0035464 622.06 34.45666667 52.80333333 0.021702087 0.391796459 0.255665678 4 4 4 0.15 dme-miR-2a-2-5p 6mer3-8 TGATGA 3L 3818062 3818067 + 3L_3818062_3818067_+ 0.734967897 0.81696663 0.775967264 0.057981837 Scsalpha FBtr0073151 3817998 3818383 3L + 3817910 3818237 stop_codon Scsalpha FlyBase G27883.2 CTGGAGAAGGCCGGCGTCATTGTGACCAGGAGTCCTGCCAAAATGGGCCACGAGCTCTTCAAGGAGATGAAGCGTCTGGAGTTAGTGTAAATAATTAAAGGCCATAACCAAACCGGAATCCGTACGCCGATCAAAGCGTATACGCAAACTCATGATGATGAACCTAACGTTAAGCTAAAAGTGTCGAAAATCGAAATTGCATTCGAGCGAACCCAAATAAATTATTGTGAAAAATTACTAGAGAGAAACGAGAGGCGTTGAATTGTGACATGTATTCCAAGAATTAAGTTAACTACTGCCGTACCACCAAGTTGAACTAAAATAACTC 108 3818062 0.95825696 29 102 487 0.938461538 1.484299839 0.146153846 0.166666667 0.307692308 108 5 3 122 3L:3817910-3818237 6 Scsalpha FBtr0303096|FBtr0073151 3817998|3817998 3818154|3818383 TGATGA 6mer3-8 dme-miR-2a-2-5p 3L + 3818034 3818102 3'utr Scsalpha FlyBase G21130.1 CGCCGATCAAAGCGTATACGCAAACTCATGATGATGAACCTAACGTTAAGCTAAAAGTGTCGAAAATCG 23 3818062 0.953537633 6 22 108 1 1.51851394 0.151515152 0.304347826 0.515151515 23 0 0 33 3L:3818034-3818102 6 22 2259 FBgn0004888 1159.643333 96.01 147.01 0.01897135 0.229142798 0.149649684 0 0 0 0.15 dme-miR-1006-3p 6mer3-8 CGAATT 3L 3818340 3818345 + 3L_3818340_3818345_+ 0.499304048 0.504592255 0.501948151 0.003739393 Scsalpha FBtr0073151 3817998 3818383 3L + 3818324 3818374 3'utr Scsalpha FlyBase G27884.1 GCTCGAATTATCAATGCGAATTGTATCTGAATGTGTAATAAATATGCATAA 21 3818345 0.786049582 3 20 156 0.962962963 1.414973348 0.296296296 0.285714286 0.444444444 21 1 0 26 3L:3818324-3818374 6 Scsalpha FBtr0073151 3817998 3818383 CGAATT 6mer3-8 dme-miR-1006-3p 3L + 3818328 3818358 3'utr Scsalpha FlyBase G21132.1 GAATTATCAATGCGAATTGTATCTGAATGTG 16 3818345 0.688206199 4 13 108 0.916666667 0.865301426 0.666666667 0.4375 0.625 16 0 2 22 3L:3818328-3818358 6 17 2260 FBgn0004888 1159.643333 96.01 147.01 0.01465968 0.177064889 0.115638392 -5 -5 -5 0.15 dme-miR-283-5p 6mer3-8 TGATAT 3L 3936739 3936744 - 3L_3936739_3936744_- 0.626839612 0.787076952 0.706958282 0.113304952 CG10866 FBtr0073173|FBtr0345342 3936595|3936058 3937012|3937012 3L - 3936720 3936776 3'utr CG10866 FlyBase G34186.2 TCTAACTAGAATACAGATAATATCCGGATATGTGATATGTAGTCCTTAGACAAACTA 89 3936748 0.988611041 10 80 766 0.91588785 1.991226076 0.065420561 0.157303371 0.299065421 89 9 0 98 3L:3936720-3936776 6 CG10866 FBtr0345342|FBtr0073173 3936058|3936595 3937012|3937012 TGATAT 6mer3-8 dme-miR-283-5p 3L - 3936655 3936770 3'utr CG10866 FlyBase G25860.1 TAGAATACAGATAATATCCGGATATGTGATATGTAGTCCTTAGACAAACTAGAGTAACGAGCATAGCGCACAACGATATCTAATCGATTTTCAACTTCAACTCTGACTCTTGTAAC 74 3936739 0.985422993 15 68 564 0.896551724 1.716003344 0.103448276 0.391891892 0.612068966 74 11 1 104 3L:3936655-3936770 6 75 2261 FBgn0035475 72.03666667 6.396666667 9.86 1.041136458 11.7248567 7.606490872 4 -5 -0.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 3936987 3936993 - 3L_3936987_3936993_- 0.629439454 0.642774021 0.636106738 0.009428915 CG10866 FBtr0073173|FBtr0073173|FBtr0073173|FBtr0345342|FBtr0345342|FBtr0345342 3936595|3936595|3936595|3936058|3936058|3936058 3937012|3937012|3937012|3937012|3937012|3937012 3L - 3936808 3937030 stop_codon CG10866 FlyBase G34187.1 CGCTACATGCAGGTCTAGGCTATATGTAGGAACACTTTGTGATAATATTGCAAAACATCATCAAATGGTAAATGCAAATTGCTTTTCAAGCTTCAAGCGCTTTAAGATTAGAGATCGCCTAGAAACCCAAATACTTCCTCGCAACAGGACACAATTTTACACGGATCTACTACTAGAAGTACCTTTTTGAGGGAACTATGCTTCCCGTCCAATTGATTTTTCT 422 3936994 0.809104586 37 401 3114 0.950664137 1.62065648 0.168880455 0.201421801 0.360531309 422 15 11 501 3L:3936808-3937030 7 CG10866 FBtr0345342|FBtr0345342|FBtr0345342|FBtr0073173|FBtr0073173|FBtr0073173 3936058|3936058|3936058|3936595|3936595|3936595 3937012|3937012|3937012|3937012|3937012|3937012 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 3936878 3937031 stop_codon CG10866 FlyBase G25861.2 TCGCTACATGCAGGTCTAGGCTATATGTAGGAACACTTTGTGATAATATTGCAAAACATCATCAAATGGTAAATGCAAATTGCTTTTCAAGCTTCAAGCGCTTTAAGATTAGAGATCGCCTAGAAACCCAAATACTTCCTCGCAACAGGACACA 216 3936994 0.802454071 20 198 1548 0.922330097 1.278753601 0.174757282 0.347222222 0.54368932 216 10 14 285 3L:3936878-3937031 7 194.5 2262 FBgn0035475 72.03666667 6.396666667 9.86 2.700013882 30.4064617 19.72616633 1 1 1 0.15 dme-miR-283-5p 8mer-A1 TGATATTA 3L 4037648 4037655 - 3L_4037648_4037655_- 0.585251127 0.585296475 0.585273801 3.21E-05 CG11593 FBtr0114509|FBtr0332982 4037521|4037521 4038458|4038458 3L - 4037624 4037878 3'utr CG11593 FlyBase G34193.2 CGCATATTGTATATTCCAAGCGTTCCAAACACGACACTTTCGCTGACACATGATGGACCCCATGCCAGTCGACAGTAGGTGCCCCATTTATCTCATCCACCATCAGAGTTAGCCGATTAGCCTGTAAGTGAAATAGCGACCATTCTTTGTGGAATCTACACACGGACACACGTAGAATCTCTCTAGCGGATAATGTGACGTACAATTAGGCAATGTAACCGATTGATATTAAGAGCGACATTTTGTTGGTTTCCT 149 4037656 0.920366462 31 147 846 0.983870968 2.26245109 0.166666667 0.194630872 0.35483871 149 3 0 183 3L:4037624-4037878 8 CG11593 FBtr0332982|FBtr0114509 4037521|4037521 4038458|4038458 TGATATTA 8mer-A1 dme-miR-283-5p 3L - 4037612 4037746 3'utr CG11593 FlyBase G25865.1 ATAGCGACCATTCTTTGTGGAATCTACACACGGACACACGTAGAATCTCTCTAGCGGATAATGTGACGTACAATTAGGCAATGTAACCGATTGATATTAAGAGCGACATTTTGTTGGTTTCCTTTTACCGCTTTA 90 4037656 0.970502511 14 86 495 0.948148148 2.10720997 0.118518519 0.388888889 0.592592593 90 7 0 128 3L:4037612-4037746 8 55 2263 FBgn0035488 490 23.04 35.21 0.112244898 2.387152778 1.562056234 1 1 1 0.15 dme-bantam-3p 7mer-A1 GATCTCA 3L 4038288 4038294 - 3L_4038288_4038294_- 0.806756821 0.813767448 0.810262134 0.004957243 CG11593 FBtr0114509|FBtr0332982 4037521|4037521 4038458|4038458 3L - 4038211 4038392 3'utr CG11593 FlyBase G34196.1 ACTCGCTACTCGAGCCTCTGCATTCCCCATCTTCAATAAGGACTGAGGCTAATCCTCCAAACCGATCGTTTGCGCTCTCTCGCTATGCTTTAATTTAAGATCTCAATCTTTGTGATACTTTATTTTTGCCTTCTCTCAGCCAAGTCGAAATCCCCCCCAGCATTTTTCTGTGTGAAGCGTGA 190 4038301 0.987340644 28 178 1597 0.937219731 1.278753601 0.295964126 0.152631579 0.278026906 190 4 10 209 3L:4038211-4038392 7 CG11593 FBtr0332982|FBtr0114509 4037521|4037521 4038458|4038458 GATCTCA 7mer-A1 dme-bantam-3p 3L - 4038231 4038417 3'utr CG11593 FlyBase G25868.1 TGCAAACTTAACGCATTCATGCCACACTCGCTACTCGAGCCTCTGCATTCCCCATCTTCAATAAGGACTGAGGCTAATCCTCCAAACCGATCGTTTGCGCTCTCTCGCTATGCTTTAATTTAAGATCTCAATCTTTGTGATACTTTATTTTTGCCTTCTCTCAGCCAAGTCGAAATCCCCCCCAGCA 108 4038299 0.984197876 30 103 906 0.961783439 2.178976947 0.324840764 0.342592593 0.547770701 108 6 0 151 3L:4038231-4038417 7 80.5 2264 FBgn0035488 490 23.04 35.21 0.164285714 3.493923611 2.286282306 7 5 6 0.15 dme-miR-33-5p 7mer-A1 AATGCAA 3L 4094424 4094430 - 3L_4094424_4094430_- 0.758175527 0.718729517 0.738452522 0.027892534 CG14995 FBtr0073272|FBtr0073271|FBtr0310630|FBtr0073273|FBtr0302304|FBtr0300877 4094341|4094341|4094341|4094341|4094341|4094341 4095008|4095008|4095008|4095008|4095008|4097425 3L - 4094398 4094473 3'utr CG14995 FlyBase G34204.1 AAAGCAAATAACGCTAAACCTTAATTTTAATATATTTACCTAAAATGCAATGAACACGTCCAGTTTATGTTTGCCG 8 4094423 0.977098458 5 7 56 0.888888889 0.602059991 0 0.125 0.222222222 8 0 1 8 3L:4094398-4094473 7 CG14995 FBtr0073272|FBtr0310630|FBtr0302304|FBtr0073271|FBtr0073273|FBtr0300877 4094341|4094341|4094341|4094341|4094341|4094341 4095008|4095008|4095008|4095008|4095008|4097425 AATGCAA 7mer-A1 dme-miR-33-5p 3L - 4094406 4094445 3'utr CG14995 FlyBase G25875.1 AATATATTTACCTAAAATGCAATGAACACGTCCAGTTTAT 9 4094424 0.95768435 4 8 43 0.923076923 1.079181246 0.384615385 0.222222222 0.461538462 9 1 0 12 3L:4094406-4094445 7 7.5 2265 FBgn0035497 401.3666667 15.55333333 23.84 0.018686156 0.482211745 0.314597315 -7 -6 -6.5 0.15 dme-miR-305-5p 7mer-m1 GTACAAT 3L 4113940 4113946 + 3L_4113940_4113946_+ 0.765533461 0.765132376 0.765332918 0.000283621 Ack FBtr0073211 4113786 4114157 3L + 4113723 4113966 stop_codon Ack FlyBase G27961.1 AGGCGCTGCAGCAGACCAACTGGAGCTTAGAGGTGGCAGCTGAACTACTACTGAATGCCGGCTAAACCCACAAACTACAACCATGTATTACCGCCTCGAATGTAATTGCTTTAGTTTTACGTGCTGAATATTCTTTTAAACTTAGCTAACGATGTATCGAATCTTTATCAAAATACTCCTAGGTGAATGCGCGAATGCAAACACATTGTCAACGACTGTACAATTTGTTCTATTTAATGTAAGC 153 4113946 0.942671385 32 146 880 0.956989247 1.773298748 0.290322581 0.189542484 0.333333333 153 6 2 178 3L:4113723-4113966 7 Ack FBtr0073211 4113786 4114157 GTACAAT 7mer-m1 dme-miR-305-5p 3L + 4113810 4113958 3'utr Ack FlyBase G21181.1 TTACCGCCTCGAATGTAATTGCTTTAGTTTTACGTGCTGAATATTCTTTTAAACTTAGCTAACGATGTATCGAATCTTTATCAAAATACTCCTAGGTGAATGCGCGAATGCAAACACATTGTCAACGACTGTACAATTTGTTCTATTTA 95 4113946 0.842325462 21 89 603 0.957746479 1.832508913 0.352112676 0.4 0.598591549 95 5 1 136 3L:4113810-4113958 7 67 2266 FBgn0028484 434.37 11.81666667 17.96333333 0.15424638 5.669957687 3.729820004 -6 -6 -6 0.15 dme-bantam-3p 6mer3-8 TGATCT 3L 4114338 4114343 - 3L_4114338_4114343_- 0.999869557 0.999973064 0.99992131 7.32E-05 Chd64 FBtr0073270|FBtr0310531 4114287|4114287 4114971|4114971 3L - 4114273 4114364 3'utr Chd64 FlyBase G34209.1 TACGTGTTACACACTTTTGAATGATCTATTTTAAATAATGTCCCCTGTTGAAAATAAATAATTATTCTTTTAACACATATTGCTTGTATCTT 44 4114343 0.992255081 11 42 476 0.961538462 1.698970004 0.057692308 0.136363636 0.269230769 44 2 0 50 3L:4114273-4114364 6 Chd64 FBtr0310531|FBtr0073270 4114287|4114287 4114971|4114971 TGATCT 6mer3-8 dme-bantam-3p 3L - 4114292 4114357 3'utr Chd64 FlyBase G25878.1 TACACACTTTTGAATGATCTATTTTAAATAATGTCCCCTGTTGAAAATAAATAATTATTCTTTTAA 25 4114344 0.992395246 8 24 264 0.973684211 1.568201724 0.157894737 0.4 0.605263158 25 1 0 37 3L:4114292-4114357 6 30 2267 FBgn0035499 3483.076667 314.5766667 480.2833333 0.008613075 0.095366259 0.062463129 0 1 0.5 0.15 dme-miR-980-5p 6mer2-7 AAAAAC 3L 4114416 4114421 - 3L_4114416_4114421_- 0.997025704 0.999532481 0.998279092 0.001772575 Chd64 FBtr0073270|FBtr0310531 4114287|4114287 4114971|4114971 3L - 4114409 4114499 3'utr Chd64 FlyBase G34210.1 GTGTTTGATGAATGTGTCTTCTATCTCGTAGAGTAACGATTACAATGTTGTTTCGAACTAACCACCTGAATACCAATCAAAAACGCAGAGC 13 4114441 0.978866028 9 12 79 0.923076923 1.079181246 0.153846154 0 0 13 1 0 12 3L:4114409-4114499 6 Chd64 FBtr0310531|FBtr0073270 4114287|4114287 4114971|4114971 AAAAAC 6mer2-7 dme-miR-980-5p 3L - 4114380 4114486 3'utr Chd64 FlyBase G25879.1 GTGTCTTCTATCTCGTAGAGTAACGATTACAATGTTGTTTCGAACTAACCACCTGAATACCAATCAAAAACGCAGAGCATTTACAATAATGTATTTACAGGCAGAGC 12 4114441 0.970371437 9 12 70 1 1.204119983 0.125 0.25 0.4375 12 0 0 16 3L:4114380-4114486 6 2.5 2268 FBgn0035499 3483.076667 314.5766667 480.2833333 0.000717756 0.007947188 0.005205261 20 20 20 0.15 dme-miR-970-3p 6mer2-7 CTTATG 3L 4123713 4123718 - 3L_4123713_4123718_- 0.989193192 0.96391128 0.976552236 0.017877003 ens FBtr0073267|FBtr0310636|FBtr0310634|FBtr0310637|FBtr0073268|FBtr0310635|FBtr0073265|FBtr0073266|FBtr0345589|FBtr0310633|FBtr0113135|FBtr0073269 4123551|4123551|4123551|4123551|4123551|4123551|4123551|4123551|4122905|4123551|4123551|4123136 4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835 3L - 4123652 4123792 3'utr ens FlyBase G34224.1 ATGCCTAGGTCTAGTGGAACTGGTAGTTCTACCATGTTGTACTATTTGTAGTAGGAGTCCCAAATCTGATTATGCTTATGTCACCCTTTATTATAGGAATGTTCTCTGTATATTATTGCGTCTCTTTTGCGTCTACGTATA 48 4123723 0.843640985 18 40 423 0.844827586 1.088136089 0.120689655 0.145833333 0.293103448 48 6 3 49 3L:4123652-4123792 6 ens FBtr0113135|FBtr0073269|FBtr0073265|FBtr0073266|FBtr0345589|FBtr0310633|FBtr0073268|FBtr0310636|FBtr0310635|FBtr0310637|FBtr0073267|FBtr0310634 4123551|4123136|4123551|4123551|4122905|4123551|4123551|4123551|4123551|4123551|4123551|4123551 4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835|4124835 CTTATG 6mer2-7 dme-miR-970-3p 3L - 4123710 4123786 3'utr ens FlyBase G25895.1 AGGTCTAGTGGAACTGGTAGTTCTACCATGTTGTACTATTTGTAGTAGGAGTCCCAAATCTGATTATGCTTATGTCA 21 4123724 0.741884886 9 17 137 0.774193548 0.903089987 0.032258065 0.238095238 0.483870968 21 5 2 24 3L:4123710-4123786 6 12 2269 FBgn0264693 3883.083333 100.8 155.21 0.003090328 0.119047619 0.077314606 5 6 5.5 0.15 dme-miR-33-5p 8mer-A1 CAATGCAA 3L 4140749 4140756 + 3L_4140749_4140756_+ 0.634053235 0.634540571 0.634296903 0.000344644 Ras64B FBtr0073212 4140459 4141398 3L + 4140714 4140823 3'utr Ras64B FlyBase G27969.1 AAATAGCTACGAAGAATCTTACAACTGACAACTAACAATGCAAAATGCAAACAGAAACACGAAACATAGGTAGATATATACAACAGATTCACACGAATAACTTATATATA 48 4140746 0.940494905 9 44 177 0.9 1.73239376 0.35 0.208333333 0.366666667 48 6 0 54 3L:4140714-4140823 8 Ras64B FBtr0073212 4140459 4141398 CAATGCAA 8mer-A1 dme-miR-33-5p 3L + 4140694 4140766 3'utr Ras64B FlyBase G21184.1 GAATAAACTTCGCCACTCTCAAATAGCTACGAAGAATCTTACAACTGACAACTAACAATGCAAAATGCAAACA 30 4140746 0.850917177 9 28 111 0.955555556 1.633468456 0.488888889 0.333333333 0.555555556 30 2 0 43 3L:4140694-4140766 8 28.5 2270 FBgn0003206 861.7733333 65.11666667 99.82666667 0.033071341 0.437675966 0.285494858 3 3 3 0.15 dme-miR-318-3p 6mer3-8 CCCAGT 3L 4141209 4141214 + 3L_4141209_4141214_+ 0.999961014 0.970374389 0.985167701 0.020920885 Ras64B FBtr0073212 4140459 4141398 3L + 4141186 4141253 3'utr Ras64B FlyBase G27971.1 TTAACGATACTTTTGTACATGTCCCCAGTCGGATCCGGATCCTATGGTTTATTGTTCGCCAAATGTAT 8 4141199 0.987090434 6 7 59 0.888888889 0.903089987 0.333333333 0.125 0.222222222 8 1 0 8 3L:4141186-4141253 6 Ras64B FBtr0073212 4140459 4141398 CCCAGT 6mer3-8 dme-miR-318-3p 3L + 4141191 4141223 3'utr Ras64B FlyBase G21185.1 GATACTTTTGTACATGTCCCCAGTCGGATCCGG 6 4141205 0.994872032 2 3 27 0.636363636 0.84509804 0.272727273 0.666666667 0.818181818 6 4 0 7 3L:4141191-4141223 6 5.5 2271 FBgn0003206 861.7733333 65.11666667 99.82666667 0.006382189 0.084463783 0.055095499 10 4 7 0.15 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 4173445 4173451 + 3L_4173445_4173451_+ 0.823265885 0.823347374 0.82330663 5.76E-05 Ero1L FBtr0073217 4173388 4173789 3L + 4173356 4173623 stop_codon Ero1L FlyBase G27974.1 CGAGATGGAGAATTTCCGGTGCGTGCTGAGGTAACCCATCCAGACTGGACTAACCGAGCGACGAGCCGGATCTCATTCGCCTCACATGAGCAGCTAGTTAATTCATACGCACATCGCTGGGGCTGCGTCTTGGACTTCCTACTGAATGCGGTTTCCCTCCCATAGTTCGTAACATTTTTGAGGCCAGAGGCTAGTAACCCCAGGATAGCTGCTTCCCTGTACATACAAACTATTACCCTAGGCTACTTGTACTTTAGCGCACCGTATC 507 4173442 0.949795386 31 498 3210 0.985148515 2.298853076 0.072607261 0.151873767 0.290429043 507 7 2 597 3L:4173356-4173623 7 Ero1L FBtr0073217 4173388 4173789 GCAGCTA 7mer-A1 dme-miR-980-3p 3L + 4173339 4173629 stop_codon Ero1L FlyBase G21189.1 CTATCCAACAGTATATACGAGATGGAGAATTTCCGGTGCGTGCTGAGGTAACCCATCCAGACTGGACTAACCGAGCGACGAGCCGGATCTCATTCGCCTCACATGAGCAGCTAGTTAATTCATACGCACATCGCTGGGGCTGCGTCTTGGACTTCCTACTGAATGCGGTTTCCCTCCCATAGTTCGTAACATTTTTGAGGCCAGAGGCTAGTAACCCCAGGATAGCTGCTTCCCTGTACATACAAACTATTACCCTAGGCTACTTGTACTTTAGCGCACCGTATCACCCTA 405 4173442 0.973535837 34 392 2374 0.975409836 2.172456974 0.091803279 0.377777778 0.586885246 405 12 3 595 3L:4173339-4173629 7 163 2272 FBgn0261274 553.5433333 32.04333333 49.15666667 0.294466558 5.086861542 3.315928663 3 3 3 0.15 dme-miR-8-3p 7mer-A1 AGTATTA 3L 4223420 4223426 + 3L_4223420_4223426_+ 0.793140279 0.789074013 0.791107146 0.002875308 CG43367 FBtr0307311|FBtr0307309|FBtr0307312|FBtr0307310 4222591|4222591|4222591|4222591 4224003|4224003|4224003|4224003 3L + 4223397 4223473 3'utr CG43367 FlyBase G27991.1 ATTAACAGAGCATTTCCAATTGAAGTATTATCACCACAGCACGATCACAGTCCGTCCACACAGATCCGAGATCCGCA 45 4223416 0.921664097 5 42 291 0.93877551 1.361727836 0.163265306 0.088888889 0.163265306 45 2 1 46 3L:4223397-4223473 7 CG43367 FBtr0307310|FBtr0307312|FBtr0307309|FBtr0307311 4222591|4222591|4222591|4222591 4224003|4224003|4224003|4224003 AGTATTA 7mer-A1 dme-miR-8-3p 3L + 4223399 4223467 3'utr CG43367 FlyBase G21201.1 TAACAGAGCATTTCCAATTGAAGTATTATCACCACAGCACGATCACAGTCCGTCCACACAGATCCGAGA 16 4223416 0.831134552 4 12 91 0.782608696 1.255272505 0.217391304 0.25 0.47826087 16 5 0 18 3L:4223399-4223467 7 22.5 2273 FBgn0263110 1107.403333 13.19666667 20.14666667 0.020317801 1.704976004 1.11681006 4 4 4 0.15 dme-miR-932-5p 6mer3-8 GGAATT 3L 4245849 4245854 + 3L_4245849_4245854_+ 0.988087026 0.638093519 0.813090272 0.247482777 pav FBtr0073227 4245833 4246233 3L + 4245821 4245978 stop_codon pav FlyBase G28008.1 AGTCGAAAATCTAAAAATGACTCAGCGTGGAATTCTCAAAGTCAATTACCCATTTAGTTCATAGTTACTTAGTTTCCATAACTTAAATTTAAGTTTATTACTCACCCACTTCGGTTTTTGGAGTTGAATCGCATTGAAGTGATTTGTTTGATTAAAGA 54 4245853 0.970816333 21 51 408 0.953125 1.30820858 0.28125 0.148148148 0.28125 54 1 2 61 3L:4245821-4245978 6 pav FBtr0073227 4245833 4246233 GGAATT 6mer3-8 dme-miR-932-5p 3L + 4245839 4245870 3'utr pav FlyBase G21213.1 GACTCAGCGTGGAATTCTCAAAGTCAATTACC 5 4245853 0.98212979 3 3 17 0.833333333 0.698970004 0.5 0.2 0.333333333 5 1 0 5 3L:4245839-4245870 6 12 2274 FBgn0011692 1162 44.12333333 67.86333333 0.010327022 0.271964947 0.176825974 -4 -4 -4 0.15 dme-miR-14-3p 7mer-A1 AGACTGA 3L 4246452 4246458 - 3L_4246452_4246458_- 0.823349562 0.823349562 0.823349562 0 ago FBtr0073247|FBtr0073246|FBtr0073245 4246341|4246341|4246341 4247475|4247475|4247475 3L - 4246433 4246478 3'utr ago FlyBase G34293.1 CGAACATATATTTTAATTATAGACTGATTTATTAGTAATTGAAATT 138 4246461 0.629084531 14 130 1594 0.946428571 1.72427587 0.029761905 0.18115942 0.327380952 138 7 2 159 3L:4246433-4246478 7 ago FBtr0073246|FBtr0073245|FBtr0073247 4246341|4246341|4246341 4247475|4247475|4247475 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 4246425 4246490 3'utr ago FlyBase G25945.1 GAAATCATTAAGCGAACATATATTTTAATTATAGACTGATTTATTAGTAATTGAAATTAATCTACA 117 4246462 0.992941524 15 109 1278 0.942307692 1.866287339 0.038461538 0.256410256 0.442307692 117 8 1 147 3L:4246425-4246490 7 125 2275 FBgn0041171 1117.28 25.37333333 39.01 0.111878849 4.92643195 3.204306588 3 4 3.5 0.15 dme-miR-1008-3p 7mer-A1 GCTGTGA 3L 4247144 4247150 - 3L_4247144_4247150_- 0.686932789 0.70491517 0.695923979 0.012715477 ago FBtr0073247|FBtr0073246|FBtr0073245 4246341|4246341|4246341 4247475|4247475|4247475 3L - 4247115 4247181 3'utr ago FlyBase G34296.1 AGGGTAGTCGGGTGGTCGGGGTGTGGCTGTGGCTGTGAGTGTATATTGTTAATAATACCCTTTTAAA 40 4247152 0.984785573 7 39 315 0.975609756 1.301029996 0.414634146 0.025 0.048780488 40 0 1 40 3L:4247115-4247181 7 ago FBtr0073246|FBtr0073245|FBtr0073247 4246341|4246341|4246341 4247475|4247475|4247475 GCTGTGA 7mer-A1 dme-miR-1008-3p 3L - 4247115 4247181 3'utr ago FlyBase G25950.1 AGGGTAGTCGGGTGGTCGGGGTGTGGCTGTGGCTGTGAGTGTATATTGTTAATAATACCCTTTTAAA 42 4247152 0.979895396 7 42 308 1 1.755874856 0.666666667 0.285714286 0.473684211 42 0 0 57 3L:4247115-4247181 7 38.5 2276 FBgn0041171 1117.28 25.37333333 39.01 0.034458685 1.51734104 0.986926429 2 2 2 0.15 dme-miR-7-5p 6mer3-8 GTCTTC 3L 4261591 4261596 + 3L_4261591_4261596_+ 0.985462902 0.920783527 0.953123214 0.045735242 CG1309 FBtr0073229 4261471 4261643 3L + 4261525 4261614 3'utr CG1309 FlyBase G28023.1 TTTAGTAATTTTTGCCTTCTGACTGCTTATTAAATTATTCTAACTGGGAACAGCCGGGTAGCTGGTGTCTTCTGAACTGGTGTGAAATTA 32 4261604 0.883857053 15 32 298 1 1.556302501 0.194444444 0.09375 0.194444444 32 0 0 36 3L:4261525-4261614 6 CG1309 FBtr0073229 4261471 4261643 GTCTTC 6mer3-8 dme-miR-7-5p 3L + 4261569 4261613 3'utr CG1309 FlyBase G21222.1 TGGGAACAGCCGGGTAGCTGGTGTCTTCTGAACTGGTGTGAAATT 13 4261604 0.983827713 7 13 109 1 1.176091259 0.333333333 0.153846154 0.266666667 13 0 0 15 3L:4261569-4261613 6 11 2277 FBgn0035519 279.17 18.09 27.51666667 0.039402515 0.608070757 0.399757723 -13 -13 -13 0.15 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3L 4320958 4320965 + 3L_4320958_4320965_+ 0.62819836 0.626176519 0.627187439 0.001429699 CG32250 FBtr0073287|FBtr0306092 4320948|4320948 4321109|4321109 3L + 4320907 4320981 stop_codon CG32250 FlyBase G28064.1 AAAGATAGCCGGCACCGTTGGCATGCTGCTTAAGCGCAACTGAAAAGAGGCTCTAGTCAACAAGTAGTTTTACTC 52 4320960 0.921412227 9 52 204 1 1.785329835 0.131147541 0.115384615 0.245901639 52 0 0 61 3L:4320907-4320981 8 CG32250 FBtr0306092|FBtr0073287 4320948|4320948 4321109|4321109 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L + 4320909 4320981 stop_codon CG32250 FlyBase G21248.1 AGATAGCCGGCACCGTTGGCATGCTGCTTAAGCGCAACTGAAAAGAGGCTCTAGTCAACAAGTAGTTTTACTC 29 4320960 0.942728198 4 29 123 1 1.602059991 0.05 0.275862069 0.475 29 0 0 40 3L:4320909-4320981 8 35.5 2278 FBgn0052250 102.0233333 9.57 14.53333333 0.347959617 3.709508882 2.44266055 -2 -2 -2 0.15 dme-miR-970-3p 7mer-m8 TCTTATG 3L 4323787 4323793 - 3L_4323787_4323793_- 0.4570803 0.622053328 0.539566814 0.116653527 Cip4 FBtr0306533|FBtr0333570|FBtr0308202|FBtr0113138|FBtr0306095|FBtr0308201|FBtr0306096|FBtr0306534|FBtr0333571|FBtr0306094|FBtr0073339 4323528|4322489|4322670|4323528|4323528|4322670|4323528|4322489|4322489|4323528|4323528 4324056|4324056|4324056|4324056|4324056|4324056|4324056|4324056|4324056|4324056|4324056 3L - 4323767 4323816 3'utr Cip4 FlyBase G34348.1 ACTTTGATTTTAAACGTCATTGATCTTATGGTAGTGCAAGCTATATCATA 40 4323796 0.743846846 5 40 330 1 1.740362689 0.072727273 0.275 0.472727273 40 0 0 55 3L:4323767-4323816 7 Cip4 FBtr0306096|FBtr0333571|FBtr0306094|FBtr0306534|FBtr0073339|FBtr0333570|FBtr0306533|FBtr0113138|FBtr0308202|FBtr0306095|FBtr0308201 4323528|4322489|4323528|4322489|4323528|4322489|4323528|4323528|4322670|4323528|4322670 4324056|4324056|4324056|4324056|4324056|4324056|4324056|4324056|4324056|4324056|4324056 TCTTATG 7mer-m8 dme-miR-970-3p 3L - 4323774 4323816 3'utr Cip4 FlyBase G25981.1 ACTTTGATTTTAAACGTCATTGATCTTATGGTAGTGCAAGCTA 24 4323796 0.981525212 5 24 181 1 1.602059991 0.025 0.5 0.7 24 0 0 40 3L:4323774-4323816 7 32 2279 FBgn0035533 1378.006667 51.31333333 79.21666667 0.023221949 0.623619592 0.403955397 3 3 3 0.15 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 3L 434196 434201 - 3L_434196_434201_- 0.993275543 0.999999791 0.996637667 0.004754798 klar FBtr0110818|FBtr0110818 434081|434081 435117|435117 3L - 434189 434282 3'utr klar FlyBase G33021.1 AAAATATCTCTTAGGTTCGTGTTTGGAATTCCTAGACTTAGTTTATGGTTTACTCACTCCTGGCAGATGATCATTGTAATATACTTATAAGGTT 32 434210 0.741794928 12 31 286 0.948717949 1.568201724 0.205128205 0.1875 0.333333333 32 2 0 37 3L:434189-434282 6 klar FBtr0110818|FBtr0110818 434081|434081 435117|435117 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 3L - 434190 434282 3'utr klar FlyBase G24986.1 AAAATATCTCTTAGGTTCGTGTTTGGAATTCCTAGACTTAGTTTATGGTTTACTCACTCCTGGCAGATGATCATTGTAATATACTTATAAGGT 29 434209 0.699419806 11 26 225 0.860465116 1.091080469 0.11627907 0.413793103 0.604651163 29 4 2 37 3L:434190-434282 6 8.5 2280 FBgn0001316 7969.913333 135.5066667 207.9333333 0.001066511 0.062727541 0.040878487 9 8 8.5 0.15 dme-miR-252-5p 8mer-m1 GTACTTAG 3L 434769 434776 - 3L_434769_434776_- 0.632479501 0.631891414 0.632185457 0.000415849 klar FBtr0333851|FBtr0333850|FBtr0110818|FBtr0333852|FBtr0343527|FBtr0112807|FBtr0072565 434297|434297|434081|434297|434297|434297|434297 435117|435117|435117|435117|435117|435117|435117 3L - 434699 434801 3'utr klar FlyBase G33023.1 TGCTGTTCGATTGAACGCTGAATATGTACTTAGGCGAGGAGCAGACGATGCCCAGCCACGTGTAAACTGCCGCATAAAGGAACAAAGGGGCGGATCGTCCCCC 481 434777 0.969575209 10 472 2650 0.981916817 2.433769834 0.253164557 0.130977131 0.244122966 481 9 1 543 3L:434699-434801 8 klar FBtr0333852|FBtr0343527|FBtr0112807|FBtr0072565|FBtr0110818|FBtr0333851|FBtr0333850 434297|434297|434297|434297|434081|434297|434297 435117|435117|435117|435117|435117|435117|435117 GTACTTAG 8mer-m1 dme-miR-252-5p 3L - 434721 434801 3'utr klar FlyBase G24989.1 TGCTGTTCGATTGAACGCTGAATATGTACTTAGGCGAGGAGCAGACGATGCCCAGCCACGTGTAAACTGCCGCATAAAGGA 268 434777 0.77170677 7 264 1435 0.992822967 2.618048097 0.265550239 0.402985075 0.61722488 268 3 0 415 3L:434721-434801 8 366.5 2281 FBgn0001316 7969.913333 135.5066667 207.9333333 0.045985444 2.704663977 1.762584162 1 1 1 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3L 4405020 4405026 + 3L_4405020_4405026_+ 0.521223639 0.521223706 0.521223673 7.07E-08 Syx17 FBtr0073293 4404847 4405168 3L + 4405001 4405037 3'utr Syx17 FlyBase G28070.2 TAGTTCAATATCCCCATTTTGTGATTTTCCACGTGCA 120 4405019 0.602524336 9 113 1180 0.946745562 1.602059991 0.01183432 0.275 0.485207101 120 6 3 160 3L:4405001-4405037 7 Syx17 FBtr0073293 4404847 4405168 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 4404932 4405036 stop_codon Syx17 FlyBase G21253.1 AGCCACCAACGGAGTGATTTGCAGCGTGCGCAGCTATTGTTCCGTTCAGTAGAAATTTGACCACGATTTTAGTTCAATATCCCCATTTTGTGATTTTCCACGTGC 103 4405019 0.989410739 11 101 981 0.981012658 2.190331698 0.056962025 0.398058252 0.607594937 103 3 0 155 3L:4404932-4405036 7 100 2282 FBgn0035540 155.05 12.22333333 18.79666667 0.644953241 8.181074448 5.320092215 1 1 1 0.15 dme-miR-304-5p 6mer2-7 GAGATT 3L 4405293 4405298 - 3L_4405293_4405298_- 0.999807884 0.999862403 0.999835143 3.85E-05 CG15019 FBtr0073335|FBtr0113139 4405212|4405125 4405360|4405360 3L - 4405263 4405309 3'utr CG15019 FlyBase G34354.1 GCTTAGTTTAGGAGATTTTGTAGGCTTTTTCTACAAAGATGTTATAG 11 4405281 0.989105411 6 11 103 1 1.113943352 0.384615385 0.181818182 0.307692308 11 0 0 13 3L:4405263-4405309 6 CG15019 FBtr0113139|FBtr0073335 4405125|4405212 4405360|4405360 GAGATT 6mer2-7 dme-miR-304-5p 3L - 4405272 4405321 3'utr CG15019 FlyBase G25984.1 TTATAAGTCCTCGCTTAGTTTAGGAGATTTTGTAGGCTTTTTCTACAAAG 14 4405282 0.662701651 7 12 133 0.863636364 0.67669361 0.090909091 0.428571429 0.636363636 14 0 3 19 3L:4405272-4405321 6 8.5 2283 FBgn0035541 1035.333333 200.3066667 308.5366667 0.008209916 0.042434933 0.0275494 -17 -16 -16.5 0.15 dme-miR-8-3p 6mer2-7 AGTATT 3L 4420031 4420036 + 3L_4420031_4420036_+ 0.947986349 1 0.973993174 0.03677924 DOR FBtr0073295|FBtr0073294 4419903|4419903 4420648|4420648 3L + 4419881 4420051 stop_codon DOR FlyBase G28084.1 AACCGCAGCAAGTGCTGCTACTAGGCGGCCACCACCCACGCCACCCACAACCACCCAACACCAACACCACCACCATGCCTCCAGCGCTCGAGGAGCCGACGGAGCCGTAGGAGGAGCATTACAATCATGGCAGGCGACGCGATTTTAATTAGTATTTTAACCTTACCCCCA 85 4420026 0.964096258 17 81 503 0.96039604 1.685741739 0.188118812 0.152941176 0.287128713 85 3 1 97 3L:4419881-4420051 6 DOR FBtr0113141|FBtr0308033|FBtr0073296|FBtr0113140|FBtr0308034|FBtr0073295|FBtr0073294 4419903|4419903|4419903|4419903|4419903|4419903|4419903 4420266|4420266|4420266|4420266|4420266|4420648|4420648 AGTATT 6mer2-7 dme-miR-8-3p 3L + 4419980 4420058 3'utr DOR FlyBase G21268.1 CGGAGCCGTAGGAGGAGCATTACAATCATGGCAGGCGACGCGATTTTAATTAGTATTTTAACCTTACCCCCAGATGAAA 52 4420037 0.799027114 12 50 356 0.961038961 1.86923172 0.142857143 0.384615385 0.584415584 52 3 0 74 3L:4419980-4420058 6 33.5 2284 FBgn0035542 115 6.26 9.503333333 0.291304348 5.3514377 3.52507892 5 -6 -0.5 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3L 4539056 4539062 + 3L_4539056_4539062_+ 0.521205361 0.519723782 0.520464572 0.001047649 CG11353 FBtr0073309|FBtr0073308 4538997|4538997 4539270|4539270 3L + 4539025 4539085 3'utr CG11353 FlyBase G28099.1 AAGGTCACCGCACACGCCTCCATCTGACAATTGTGATTGCTTTCATGTACAACTAATCATT 63 4539055 0.825982567 7 58 502 0.934210526 1.073107098 0.026315789 0.174603175 0.315789474 63 0 5 71 3L:4539025-4539085 7 CG11353 FBtr0073308|FBtr0073309 4538997|4538997 4539270|4539270 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 4539026 4539093 3'utr CG11353 FlyBase G21280.1 AGGTCACCGCACACGCCTCCATCTGACAATTGTGATTGCTTTCATGTACAACTAATCATTATTATCGA 57 4539062 0.98701345 8 54 474 0.975308642 1.897627091 0 0.263157895 0.481481481 57 2 0 79 3L:4539026-4539093 7 55 2285 FBgn0035557 9.256666667 0.366666667 0.553333333 5.941663666 150 99.39759036 1 -6 -2.5 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 4552958 4552965 + 3L_4552958_4552965_+ 0.500120317 0.406086627 0.453103472 0.066491867 CG11357 FBtr0304987|FBtr0113142|FBtr0073310|FBtr0113143 4552565|4552565|4552565|4552565 4553457|4553457|4553457|4553457 3L + 4552882 4553094 3'utr CG11357 FlyBase G28116.1 AAACTCTAATAGCGGCAACAATAAACGGAGCGCATAACCTTAAGCACAACTCTTAAATCGTAAGAAAACTACAATAGTACTTAATAAACGATAAAATGATTGAAAACTGCTGAAATCAGTGAATAACCAAACCAAATATTGATTTCGATGTAGATCGCGTAACAGTGGACGGAAATATTTATTAAAAAGTATATATACGTAGGGGCAAACGAA 240 4552956 0.930647674 33 229 1274 0.959854015 1.942834494 0.145985401 0.133333333 0.240875912 240 9 2 263 3L:4552882-4553094 8 CG11357 FBtr0113143|FBtr0073310|FBtr0113142|FBtr0304987 4552565|4552565|4552565|4552565 4553457|4553457|4553457|4553457 GTACTTAA 8mer-A1 dme-miR-252-5p 3L + 4552884 4553073 3'utr CG11357 FlyBase G21296.1 ACTCTAATAGCGGCAACAATAAACGGAGCGCATAACCTTAAGCACAACTCTTAAATCGTAAGAAAACTACAATAGTACTTAATAAACGATAAAATGATTGAAAACTGCTGAAATCAGTGAATAACCAAACCAAATATTGATTTCGATGTAGATCGCGTAACAGTGGACGGAAATATTTATTAAAAAGTAT 164 4552956 0.967506674 22 154 818 0.95703125 1.91204483 0.12109375 0.420731707 0.62890625 164 9 2 245 3L:4552884-4553073 8 52 2286 FBgn0035558 4857.766667 204.6066667 314.1433333 0.010704508 0.254146167 0.165529535 2 2 2 0.15 dme-miR-277-3p 6mer2-7 GCATTT 3L 4593187 4593192 - 3L_4593187_4593192_- 0.997387378 0.975803504 0.986595441 0.015262122 Src64B FBtr0343995|FBtr0304989|FBtr0304990 4592893|4592893|4592445 4594640|4594640|4594640 3L - 4593171 4593217 3'utr Src64B FlyBase G34374.1 TTCTGTAGCATAAAACCAAAGTTTAGCATTTCGTATTGAGATATATG 14 4593196 0.779006446 4 12 79 0.857142857 1.255272505 0 0.285714286 0.523809524 14 3 0 18 3L:4593171-4593217 6 Src64B FBtr0304989|FBtr0304990|FBtr0343995 4592893|4592445|4592893 4594640|4594640|4594640 GCATTT 6mer2-7 dme-miR-277-3p 3L - 4593174 4593229 3'utr Src64B FlyBase G25997.1 ATTGTGTGCACATTCTGTAGCATAAAACCAAAGTTTAGCATTTCGTATTGAGATAT 10 4593196 0.974891474 3 10 67 1 1.113943352 0.307692308 0.3 0.461538462 10 0 0 13 3L:4593174-4593229 6 11 2287 FBgn0262733 767.5933333 20.04333333 30.95666667 0.014330505 0.54881091 0.355335415 4 4 4 0.15 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 3L 4629397 4629402 + 3L_4629397_4629402_+ 0.702680938 0.936536489 0.819608714 0.165360881 Rpd3 FBtr0073317|FBtr0073317 4629114|4629114 4629467|4629467 3L + 4629368 4629407 3'utr Rpd3 FlyBase G28132.1 AGTGTATAGCTAAGCAAAAAGTGAATGCATACTTACAAGC 9 4629396 0.929642568 3 9 35 1 1.079181246 0 0.333333333 0.5 9 0 0 12 3L:4629368-4629407 6 Rpd3 FBtr0073317|FBtr0073317 4629114|4629114 4629467|4629467 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 3L + 4629343 4629427 3'utr Rpd3 FlyBase G21307.1 AAACACAATTTATTTTAAGATCGAAAGTGTATAGCTAAGCAAAAAGTGAATGCATACTTACAAGCGATCCAATGTGGCGAATAAC 12 4629399 0.957794195 7 10 50 1 1.079181246 0 0.2 0.333333333 10 0 0 12 3L:4629343-4629427 6 6.5 2288 FBgn0015805 1165.29 66.60666667 101.9933333 0.005578011 0.097587829 0.063729656 1 -2 -0.5 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 5144303 5144308 - 3L_5144303_5144308_- 0.776751913 0.979141196 0.877946555 0.143110846 CG10671 FBtr0077177|FBtr0077178 5144080|5144080 5144395|5144395 3L - 5144228 5144323 3'utr CG10671 FlyBase G34482.1 CGGATTGGAATTTATACCAAATTTTTGTATATTCAGCAACGATGATATGAAACGATGATGATATTACTAAGCAAGCAGCCGAGGCTGGCACTGGAT 10 5144301 0.98924799 7 8 59 0.866666667 1.113943352 0.2 0.3 0.533333333 10 2 0 13 3L:5144228-5144323 6 CG10671 FBtr0077178|FBtr0077177 5144080|5144080 5144395|5144395 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 5144291 5144345 3'utr CG10671 FlyBase G26060.1 GAAGGAATTGATAGTTAGGTGACGGATTGGAATTTATACCAAATTTTTGTATATT 6 5144301 0.992998419 3 5 54 0.6 0.77815125 0.4 0.333333333 0.6 6 4 0 6 3L:5144291-5144345 6 4 2289 FBgn0035586 278.5933333 18.25333333 27.90333333 0.014357845 0.219138057 0.143352049 -7 -7 -7 0.15 dme-miR-14-3p 7mer-A1 AGACTGA 3L 5158850 5158856 - 3L_5158850_5158856_- 0.823168342 0.823295518 0.82323193 8.99E-05 shep FBtr0308859|FBtr0077174|FBtr0333288|FBtr0333289 5157906|5155819|5155819|5158793 5162466|5162466|5162466|5162466 3L - 5158828 5158871 5'utr shep FlyBase G34491.1 ACGATTATTTGCTTTAGACTGACTACGAACTGAAACTGTAACAA 9 5158858 0.976034573 6 9 65 1 1.041392685 0.181818182 0.111111111 0.272727273 9 0 0 11 3L:5158828-5158871 7 shep FBtr0333288|FBtr0333289|FBtr0308859|FBtr0077174 5155819|5158793|5157906|5155819 5162466|5162466|5162466|5162466 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 5158807 5158869 5'utr shep FlyBase G26066.1 GATTATTTGCTTTAGACTGACTACGAACTGAAACTGTAACAATAACAACAAATGCAGGATTGT 7 5158858 0.982139748 4 7 51 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 3L:5158807-5158869 7 7 2290 FBgn0052423 9763.176667 275.8933333 425.4466667 0.00071698 0.025372124 0.016453296 2 2 2 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3L 5159263 5159269 - 3L_5159263_5159269_- 0.521216828 0.521223319 0.521220074 4.60E-06 shep FBtr0308859|FBtr0077174|FBtr0333288|FBtr0333289 5157906|5155819|5155819|5158793 5162466|5162466|5162466|5162466 3L - 5159254 5159287 5'utr shep FlyBase G34492.1 AAGCCTAAGCATTGTATTTGTGATTTTTTCGAAT 23 5159270 0.666961311 4 21 237 0.966666667 1.462397998 0.033333333 0.217391304 0.4 23 1 0 29 3L:5159254-5159287 7 shep FBtr0333288|FBtr0333289|FBtr0308859|FBtr0077174 5155819|5158793|5157906|5155819 5162466|5162466|5162466|5162466 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 5159251 5159283 5'utr shep FlyBase G26067.1 CTAAGCATTGTATTTGTGATTTTTTCGAATGTT 6 5159270 0.71937558 4 6 72 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3L:5159251-5159283 7 13.5 2291 FBgn0052423 9763.176667 275.8933333 425.4466667 0.001382747 0.048931954 0.031731357 1 1 1 0.15 dme-miR-7-5p 6mer3-8 GTCTTC 3L 5343811 5343816 - 3L_5343811_5343816_- 0.858100841 0.778281427 0.818191134 0.056440839 lama FBtr0077160|FBtr0077159|FBtr0333595|FBtr0077161 5343617|5343617|5343617|5343617 5343995|5343995|5343995|5343995 3L - 5343737 5343862 3'utr lama FlyBase G34511.1 TCGTATAATTTGTGTGTTCCTAGTTGGTACATATCTTACGTCCATAGTCTTCTAGTGTCTACTGTACTTATGTATGTATGCGTGTCCAATCGATTATTGTCTTCCAGCTGTACAGCTTTTTATTTT 166 5343827 0.778232526 21 154 1685 0.929648241 1.966141733 0.155778894 0.180722892 0.316582915 166 13 1 185 3L:5343737-5343862 6 lama FBtr0077160|FBtr0077159|FBtr0333595|FBtr0077161 5343617|5343617|5343617|5343617 5343995|5343995|5343995|5343995 GTCTTC 6mer3-8 dme-miR-7-5p 3L - 5343729 5343879 3'utr lama FlyBase G26083.1 TAGTGTCCTGTCTTGTCTCGTATAATTTGTGTGTTCCTAGTTGGTACATATCTTACGTCCATAGTCTTCTAGTGTCTACTGTACTTATGTATGTATGCGTGTCCAATCGATTATTGTCTTCCAGCTGTACAGCTTTTTATTTTCCGTAGGT 116 5343827 0.958983483 29 111 1139 0.971264368 2.227886705 0.172413793 0.387931034 0.591954023 116 5 0 169 3L:5343729-5343879 6 69.5 2292 FBgn0016031 538.5966667 18.35333333 28.06333333 0.129039046 3.78677806 2.476541157 11 11 11 0.15 dme-miR-1006-3p 7mer-m8 CGAATTT 3L 5343946 5343952 - 3L_5343946_5343952_- 0.454833927 0.444054936 0.449444431 0.007621904 lama FBtr0077160|FBtr0077159|FBtr0333595|FBtr0077161 5343617|5343617|5343617|5343617 5343995|5343995|5343995|5343995 3L - 5343917 5343969 3'utr lama FlyBase G34512.1 AACCCGTAGAACCCAATCGAATTTGTACCCAAAACCCACCTCCATCCATTTTG 13 5343953 0.953770271 6 11 62 0.9375 1.176091259 0 0.230769231 0.375 13 1 0 15 3L:5343917-5343969 7 lama FBtr0077160|FBtr0077159|FBtr0333595|FBtr0077161 5343617|5343617|5343617|5343617 5343995|5343995|5343995|5343995 CGAATTT 7mer-m8 dme-miR-1006-3p 3L - 5343917 5343954 3'utr lama FlyBase G26084.1 ATCGAATTTGTACCCAAAACCCACCTCCATCCATTTTG 7 5343923 0.684880783 4 6 31 0.7 0.84509804 0.1 0.285714286 0.5 7 3 0 7 3L:5343917-5343954 7 5 2293 FBgn0016031 538.5966667 18.35333333 28.06333333 0.009283385 0.272430076 0.178168429 1 -29 -14 0.15 dme-miR-12-5p 7mer-A1 ATACTCA 3L 5356869 5356875 - 3L_5356869_5356875_- 0.823153755 0.820249593 0.821701674 0.00205358 Klp64D FBtr0077157 5356862 5357220 3L - 5356862 5356905 3'utr Klp64D FlyBase G34519.1 GTGTGCTCTTGGCTTTTAAATAAAAATATGATACTCACACGTAA 30 5356877 0.80619775 6 29 200 0.96969697 1.505149978 0.242424242 0.1 0.181818182 30 1 0 32 3L:5356862-5356905 7 Klp64D FBtr0077157 5356862 5357220 ATACTCA 7mer-A1 dme-miR-12-5p 3L - 5356863 5356929 3'utr Klp64D FlyBase G26088.1 ATTAGGCACAAATATATAACTATTGTGTGCTCTTGGCTTTTAAATAAAAATATGATACTCACACGTA 21 5356877 0.944069004 6 21 122 1 1.505149978 0.0625 0.428571429 0.625 21 0 0 32 3L:5356863-5356929 7 16.5 2294 FBgn0004380 595.0833333 28.55 43.68333333 0.027727209 0.57793345 0.377718428 2 2 2 0.15 dme-miR-282-5p 7mer-A1 GAGGCTA 3L 5362638 5362644 + 3L_5362638_5362644_+ 0.800481723 0.779342326 0.789912024 0.014947813 CG4769 FBtr0077144 5362329 5362798 3L + 5362536 5362685 3'utr CG4769 FlyBase G28187.1 GATTCAAAATAAAACTAAATAGCTAAATCTAAAACATCCTTGGTAACCTACTGATGGTAACCAAACAAAGATCGGATCGGAAGATTCAATGAGCGGGGGATTGAGGCTACAAAGACTACAGGAGCCTAGCGAAATGATTGATGGATAATG 80 5362636 0.926462037 10 73 237 0.966292135 1.934498451 0.269662921 0.12987013 0.247191011 77 3 0 86 3L:5362536-5362685 7 CG4769 FBtr0077144 5362329 5362798 GAGGCTA 7mer-A1 dme-miR-282-5p 3L + 5362623 5362661 3'utr CG4769 FlyBase G21341.1 AATGAGCGGGGGATTGAGGCTACAAAGACTACAGGAGCC 37 5362636 0.763653892 2 36 90 0.983050847 1.462397998 0.237288136 0.405405405 0.627118644 37 0 1 58 3L:5362623-5362661 7 52 2295 FBgn0035600 2068.833333 167.37 257.41 0.025134939 0.310688893 0.202012354 2 2 2 0.15 dme-miR-33-5p 7mer-A1 AATGCAA 3L 5363602 5363608 - 3L_5363602_5363608_- 0.712233236 0.721662895 0.716948066 0.006667805 Uev1A FBtr0077156|FBtr0077155|FBtr0345026 5362882|5363184|5363148 5363874|5363874|5363874 3L - 5363511 5363659 3'utr Uev1A FlyBase G34531.2 AATGAACGTAATAAAGATCGAGTGCGGTTATTGTGGCAAGAACAACAACCAAATGCAAGCTATATACTATAAGTAAAGGGAACAGCAGCGAAAAATGCGATAGGAGCGTCACTATGAAGAGGTCGTCGTCGTCCCTTCCGTCATGAACT 137 5363606 0.991906987 14 130 743 0.961290323 2.173186268 0.180645161 0.116788321 0.219354839 137 6 0 149 3L:5363511-5363659 7 Uev1A FBtr0345026|FBtr0077155|FBtr0077156 5363148|5363184|5362882 5363874|5363874|5363874 AATGCAA 7mer-A1 dme-miR-33-5p 3L - 5363579 5363643 3'utr Uev1A FlyBase G26097.1 ATCGAGTGCGGTTATTGTGGCAAGAACAACAACCAAATGCAAGCTATATACTATAAGTAAAGGGA 63 5363606 0.987815173 8 61 288 0.97826087 1.954242509 0.163043478 0.349206349 0.554347826 63 2 0 90 3L:5363579-5363643 7 73 2296 FBgn0035601 3984.51 383.0633333 590.3 0.018320948 0.190569009 0.123665933 -2 -2 -2 0.15 dme-miR-184-3p 6mer2-7 CCGTCC 3L 5559567 5559572 - 3L_5559567_5559572_- 0.999255881 0.999988364 0.999622123 0.000517956 sinu FBtr0077136 5559468 5560751 3L - 5559503 5559625 3'utr sinu FlyBase G34543.1 ATTTTCTAAACCGAGAATTTAGCAATGTATTAAAGCAATACATACGTCTTTTACCGTCCCATATACAATAATATGTGTAACATTTTTATGTACAAACGACTTTTAGCTAAAGCGAAGAATAAT 414 5559574 0.749079152 20 401 2901 0.968565815 1.847748879 0.074656189 0.18115942 0.333988212 414 10 6 493 3L:5559503-5559625 6 sinu FBtr0077136 5559468 5560751 CCGTCC 6mer2-7 dme-miR-184-3p 3L - 5559545 5559594 3'utr sinu FlyBase G26109.2 AAAGCAATACATACGTCTTTTACCGTCCCATATACAATAATATGTGTAAC 203 5559574 0.64272732 8 190 1495 0.94137931 1.959041392 0.031034483 0.310344828 0.517241379 203 15 2 273 3L:5559545-5559594 6 237 2297 FBgn0010894 232.6666667 13.51333333 20.52333333 1.018624642 17.53823384 11.54783174 2 2 2 0.15 dme-miR-184-3p 7mer-m8 TCCGTCC 3L 5559644 5559650 - 3L_5559644_5559650_- 0.661468856 0.661360954 0.661414905 7.63E-05 sinu FBtr0077136 5559468 5560751 3L - 5559630 5559683 3'utr sinu FlyBase G34543.2 TTTTAAAGGTAACAATTAGGTCTGTATTAATCATCCGTCCTTTGCACGTATTTG 441 5559643 0.644803719 12 389 4167 0.874766355 0.945969983 0.143925234 0.183673469 0.327102804 441 15 52 468 3L:5559630-5559683 7 sinu FBtr0077136 5559468 5560751 TCCGTCC 7mer-m8 dme-miR-184-3p 3L - 5559631 5559679 3'utr sinu FlyBase G26110.1 AAAGGTAACAATTAGGTCTGTATTAATCATCCGTCCTTTGCACGTATTT 325 5559643 0.697642387 14 275 3109 0.845338983 0.852784869 0.165254237 0.335384615 0.542372881 325 18 55 399 3L:5559631-5559679 7 364.5 2298 FBgn0010894 232.6666667 13.51333333 20.52333333 1.566618911 26.97335964 17.76027286 -7 -7 -7 0.15 dme-miR-184-3p 7mer-m8 TCCGTCC 3L 5560606 5560612 - 3L_5560606_5560612_- 0.658089664 0.657988819 0.658039241 7.13E-05 sinu FBtr0077136 5559468 5560751 3L - 5560583 5560641 3'utr sinu FlyBase G34547.2 CAACCAAGAGGAAAACAAAACAAAAACATTCCGTCCCCTCAAAGAATTCTCACCCTAAA 2305 5560613 0.949504949 5 2278 7692 0.991147309 2.492760389 0.002832861 0.18308026 0.333215297 2305 17 8 2799 3L:5560583-5560641 7 sinu FBtr0077136 5559468 5560751 TCCGTCC 7mer-m8 dme-miR-184-3p 3L - 5560562 5560640 3'utr sinu FlyBase G26115.1 AACCAAGAGGAAAACAAAACAAAAACATTCCGTCCCCTCAAAGAATTCTCACCCTAAACATTACAGTCGAACTTCTCTA 1540 5560613 0.945764769 10 1526 5069 0.988743809 2.438542349 0.000900495 0.319480519 0.528140477 1540 18 7 2196 3L:5560562-5560640 7 1910.5 2299 FBgn0010894 232.6666667 13.51333333 20.52333333 8.211318052 141.3788851 93.0891668 1 1 1 0.15 dme-miR-986-5p 7mer-m8 ATTCGAG 3L 5564931 5564937 + 3L_5564931_5564937_+ 0.671234106 0.670116504 0.670675305 0.000790263 Sras FBtr0077083 5564827 5565103 3L + 5564918 5564953 3'utr Sras FlyBase G28194.1 AATTGCATATCCCATTCGAGCCAATTCCGCGCACAA 26 5564932 0.737980404 2 26 142 1 1.491361694 0 0.192307692 0.322580645 26 0 0 31 3L:5564918-5564953 7 Sras FBtr0077083 5564827 5565103 ATTCGAG 7mer-m8 dme-miR-986-5p 3L + 5564906 5564955 3'utr Sras FlyBase G21345.1 TGTTTATATGTAAATTGCATATCCCATTCGAGCCAATTCCGCGCACAAAA 21 5564932 0.965155172 4 20 116 1 1.462397998 0 0.285714286 0.482758621 21 0 0 29 3L:5564906-5564955 7 23 2300 FBgn0029121 69.33333333 6.623333333 10.01666667 0.331730769 3.472571716 2.296173045 -1 -1 -1 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3L 5566128 5566133 + 3L_5566128_5566133_+ 0.861044583 0.620400789 0.740722686 0.170160863 bc10 FBtr0077084 5565863 5566765 3L + 5565977 5566185 3'utr bc10 FlyBase G28197.1 GCGTTGTTACAGCTTTACATCCTCGAAGATCGGAGAAAGTCAGAGGAGCAGGCGGATATAAGGGATTAGGGATAGCTTGACTAAGTCGGTAAAATCAAGTGATCAGTGATACAAGTGATGAGTGAGTCCGACCAGGAACAAAGATTGTGTGTCTAGTAATACCCATTGCATTATTTCCAGCCCTCTATATGTTACCTTCATAATTCTCT 41 5566121 0.983745117 19 38 282 0.954545455 1.322219295 0.181818182 0.073170732 0.136363636 41 1 1 42 3L:5565977-5566185 6 bc10 FBtr0077084 5565863 5566765 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 5565909 5566210 3'utr bc10 FlyBase G21349.1 AGCCCCCGTAGTCATAGTCAACGAAGATAAAGTGCTAATAATAACTACCTTTTTACGGAATTACGTTCGCGTTGTTACAGCTTTACATCCTCGAAGATCGGAGAAAGTCAGAGGAGCAGGCGGATATAAGGGATTAGGGATAGCTTGACTAAGTCGGTAAAATCAAGTGATCAGTGATACAAGTGATGAGTGAGTCCGACCAGGAACAAAGATTGTGTGTCTAGTAATACCCATTGCATTATTTCCAGCCCTCTATATGTTACCTTCATAATTCTCTTGATTATGAATTGTAATTGTATTGT 56 5566121 0.999929823 27 54 328 0.967032967 1.944482672 0.186813187 0.464285714 0.67032967 56 3 0 88 3L:5565909-5566210 6 10 2301 FBgn0040239 273.54 24.22 36.96666667 0.036557725 0.412881916 0.270513977 7 7 7 0.15 dme-miR-33-5p 8mer-A1 CAATGCAA 3L 5566343 5566350 + 3L_5566343_5566350_+ 0.634062737 0.634448354 0.634255546 0.000272731 bc10 FBtr0077084 5565863 5566765 3L + 5566223 5566377 3'utr bc10 FlyBase G28198.1 TAAAGCTTAGACGAATTTAGTTTATACGAAGAAAGCGCTACGAAAACGTATTGTACATCACCCCACCCAAAAGCCCTACCCTTCAAATCAAAAGAAAAAACCCCTATCCAACCCACTTGTCAATGCAACTTACGATTAGTCATATATGTTATATA 135 5566342 0.974351947 20 126 770 0.949685535 1.701855693 0.050314465 0.148148148 0.27672956 135 6 2 151 3L:5566223-5566377 8 bc10 FBtr0077084 5565863 5566765 CAATGCAA 8mer-A1 dme-miR-33-5p 3L + 5566318 5566388 3'utr bc10 FlyBase G21351.1 AAAAACCCCTATCCAACCCACTTGTCAATGCAACTTACGATTAGTCATATATGTTATATATAGATAAATAC 42 5566342 0.979956428 8 37 263 0.921875 1.770852012 0.046875 0.404761905 0.609375 42 5 0 59 3L:5566318-5566388 8 62.5 2302 FBgn0040239 273.54 24.22 36.96666667 0.228485779 2.580511974 1.690712353 1 1 1 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA 3L 5590070 5590077 + 3L_5590070_5590077_+ 0.623311302 0.624878078 0.62409469 0.001107895 l(3)psg2 FBtr0077085 5589915 5590390 3L + 5590048 5590128 3'utr l(3)psg2 FlyBase G28229.1 AATTGACCATTTGTAAACAAGTTGCATTTATTCATAGAAGGTCGTTTTCGATTTATTCAGCTTTAGGTTTCTATGTCATTT 31 5590069 0.892120342 5 31 292 1 1.591064607 0.102564103 0.225806452 0.384615385 31 0 0 39 3L:5590048-5590128 8 l(3)psg2 FBtr0077085 5589915 5590390 TGCATTTA 8mer-A1 dme-miR-277-3p 3L + 5590057 5590089 3'utr l(3)psg2 FlyBase G21376.1 TTTGTAAACAAGTTGCATTTATTCATAGAAGGT 14 5590069 0.893072524 2 11 100 0.85 1.230448921 0.1 0.285714286 0.5 14 3 0 17 3L:5590057-5590089 8 17 2303 FBgn0035617 542.34 10 15.43333333 0.03134565 1.7 1.101511879 1 1 1 0.15 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 5601193 5601198 - 3L_5601193_5601198_- 0.99999992 0.998606618 0.999303269 0.000985212 CG10590 FBtr0077127 5601094 5601788 3L - 5601113 5601219 3'utr CG10590 FlyBase G34576.1 AATCTATGCAACTGCAACAAAATGTGACTTGAACTTGTTTGCGCCAATTAAGTTATGTACGATGCAAGAAATGTGCTGATTAGCAATAGTCGATAATCTAATAATAA 51 5601196 0.748760014 15 49 303 0.96969697 1.806179974 0.196969697 0.254901961 0.424242424 51 2 0 64 3L:5601113-5601219 6 CG10590 FBtr0077127 5601094 5601788 ATGTGA 6mer3-8 dme-miR-1003-3p 3L - 5601110 5601220 3'utr CG10590 FlyBase G26140.1 CAATCTATGCAACTGCAACAAAATGTGACTTGAACTTGTTTGCGCCAATTAAGTTATGTACGATGCAAGAAATGTGCTGATTAGCAATAGTCGATAATCTAATAATAAATT 39 5601191 0.979165506 14 36 252 0.948275862 1.740362689 0.206896552 0.384615385 0.586206897 39 3 0 55 3L:5601110-5601220 6 27 2304 FBgn0035622 320.01 14.52333333 22.10333333 0.084372363 1.859077347 1.221535213 -2 -7 -4.5 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA 3L 5601454 5601461 - 3L_5601454_5601461_- 0.625301102 0.625294066 0.625297584 4.95E-06 CG10590 FBtr0077127 5601094 5601788 3L - 5601430 5601498 3'utr CG10590 FlyBase G34577.1 ATTTGGGAAAACATTGTGAATTAAAAGCTCTTTCTGTTGCATTTACGTTTTGCTAGTTTTAAGAGTCAA 13 5601462 0.99246232 7 12 133 0.933333333 1.146128036 0.2 0.153846154 0.266666667 13 1 0 14 3L:5601430-5601498 8 CG10590 FBtr0077127 5601094 5601788 TGCATTTA 8mer-A1 dme-miR-277-3p 3L - 5601431 5601499 3'utr CG10590 FlyBase G26141.1 AATTTGGGAAAACATTGTGAATTAAAAGCTCTTTCTGTTGCATTTACGTTTTGCTAGTTTTAAGAGTCA 14 5601485 0.985715514 5 13 113 0.947368421 1.255272505 0.473684211 0.214285714 0.421052632 14 1 0 18 3L:5601431-5601499 8 7.5 2305 FBgn0035622 320.01 14.52333333 22.10333333 0.023436768 0.516410374 0.339315337 1 24 12.5 0.15 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3L 5659773 5659779 - 3L_5659773_5659779_- 0.606392622 0.60812675 0.607259686 0.001226265 Sse FBtr0077125 5659698 5659878 3L - 5659753 5659832 3'utr Sse FlyBase G34593.1 GGAACTGTGTACAATAATTTAATTTAATTGAACTACTTCATTCAAGTGGAAAGTGGTGCTCAAAGTTTGCATTAAACGCT 63 5659779 0.971379222 9 60 344 0.961038961 1.86923172 0.181818182 0.158730159 0.311688312 63 3 0 74 3L:5659753-5659832 7 Sse FBtr0077125 5659698 5659878 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3L - 5659734 5659803 3'utr Sse FlyBase G26150.1 GAACTACTTCATTCAAGTGGAAAGTGGTGCTCAAAGTTTGCATTAAACGCTAAATGTAACACTCAGAATA 33 5659779 0.963026559 4 33 168 1 1.681241237 0.208333333 0.333333333 0.541666667 33 0 0 48 3L:5659734-5659803 7 44.5 2306 FBgn0035627 140.3333333 7.786666667 11.84333333 0.317102138 5.71489726 3.757388123 0 0 0 0.15 dme-miR-13b-2-5p 6mer2-7 TTGACG 3L 574216 574221 + 3L_574216_574221_+ 0.789589672 0.999999684 0.894794678 0.148782338 hipk FBtr0072552|FBtr0331786|FBtr0072551 574200|574200|574200 581099|576047|576047 3L + 574189 574240 stop_codon hipk FlyBase G26816.2 TGGGGCTGAGTAGACCGACGATGGGAGTTGACGGGGAGAGGGGCGATGAGGA 12 574217 0.813383664 5 10 27 0.923076923 1.079181246 0.538461538 0.083333333 0.153846154 12 1 0 12 3L:574189-574240 6 hipk FBtr0072552|FBtr0331786|FBtr0072551 574200|574200|574200 581099|576047|576047 TTGACG 6mer2-7 dme-miR-13b-2-5p 3L + 574155 574239 stop_codon hipk FlyBase G20277.1 ACGCGGCGCACTTTGCGCCCACCAACATATGGTATGGGGCTGAGTAGACCGACGATGGGAGTTGACGGGGAGAGGGGCGATGAGG 13 574211 0.951330709 8 11 46 0.818181818 1.255272505 0.545454545 0.538461538 0.727272727 13 4 0 18 3L:574155-574239 6 7.5 2307 FBgn0035142 10724.84 157.7366667 241.6366667 0.000699311 0.0475476 0.031038336 -1 5 2 0.15 dme-miR-14-3p 7mer-A1 AGACTGA 3L 5750322 5750328 - 3L_5750322_5750328_- 0.823349558 0.823348394 0.823348976 8.49E-07 DnaJ-1 FBtr0077124|FBtr0077123 5750027|5750027 5750588|5750588 3L - 5750070 5750551 3'utr DnaJ-1 FlyBase G34598.1 CGCATATAATTGTTATCACTTTAGTTAAGGCCTATATTTAATTTACCGTACGTACTCGTAAGACAACTTAGCCTAACCAATTGTAGCCCTAAGCTAGTGAGTGTGCCAAGCGAAGAGCTGTAGATATTGGCCGAGGATGCAAGCGCTGGATAGGATTAGGAAAGAGAACAACACACACACACACACACACATAAAGCAGCCCGTGTAGCCCGTTTCGTGTTGGAGACTGATCGATTATTAGCTATTTAGCATTACACAAATTCCATAAGTTGTTTTGTTTACCGCCACATGAATCGGTGCCTCAACATCTTATACATAATAATCCCAAAACAAAATATTAAATAAATGAGGTATTATAAATTTAAAGTAACTAACCATTTTTCAAGCAAAGCACATTTTCGGCATTCCAACACGGGGAGGTTACATCAGTTAGTAGAACACTTATAGATTTATACGCCGTAAGGACATAGTACGTTTTAGTA 679 5750336 0.971579659 70 613 3762 0.910539216 1.829596129 0.234068627 0.176730486 0.31495098 679 63 10 743 3L:5750070-5750551 7 DnaJ-1 FBtr0077124|FBtr0077123 5750027|5750027 5750588|5750588 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 5750185 5750496 3'utr DnaJ-1 FlyBase G26155.1 TCGTAAGACAACTTAGCCTAACCAATTGTAGCCCTAAGCTAGTGAGTGTGCCAAGCGAAGAGCTGTAGATATTGGCCGAGGATGCAAGCGCTGGATAGGATTAGGAAAGAGAACAACACACACACACACACACACATAAAGCAGCCCGTGTAGCCCGTTTCGTGTTGGAGACTGATCGATTATTAGCTATTTAGCATTACACAAATTCCATAAGTTGTTTTGTTTACCGCCACATGAATCGGTGCCTCAACATCTTATACATAATAATCCCAAAACAAAATATTAAATAAATGAGGTATTATAAATTTAAAG 410 5750337 0.975410799 48 353 2257 0.861685215 2.256878032 0.255961844 0.395121951 0.60572337 410 85 2 542 3L:5750185-5750496 7 179.5 2308 FBgn0263106 2505.54 158.3466667 242.02 0.071641243 1.13358875 0.741674242 8 9 8.5 0.15 dme-miR-2a-2-5p 7mer-A1 GATGAGA 3L 5761766 5761772 + 3L_5761766_5761772_+ 0.594591239 0.603417085 0.599004162 0.006240854 Ubp64E FBtr0077095|FBtr0306259 5761383|5761383 5761886|5761886 3L + 5761682 5761847 3'utr Ubp64E FlyBase G28261.1 TGGGGTGGCCAAGTGAGCACAGCACTAAGTGACGTTTAACATAACGAAGTTATTCTTGCAACTTTCGTAATACAAGAGTTCAAAGATGAGACTGTAAAATTTAAAATAACAAAAGGCAAGAAATCTAAATTACAAATTGTATAATGTGAATGTGAACATCAAAACT 1197 5761768 0.972437919 19 1180 7016 0.985294118 3.127104798 0.0125 0.11946533 0.225 1197 20 0 1340 3L:5761682-5761847 7 Ubp64E FBtr0077095|FBtr0306259 5761383|5761383 5761886|5761886 GATGAGA 7mer-A1 dme-miR-2a-2-5p 3L + 5761746 5761848 3'utr Ubp64E FlyBase G21405.1 TCGTAATACAAGAGTTCAAAGATGAGACTGTAAAATTTAAAATAACAAAAGGCAAGAAATCTAAATTACAAATTGTATAATGTGAATGTGAACATCAAAACTA 760 5761768 0.947975984 15 751 4368 0.989954338 2.733999287 0.00456621 0.328947368 0.534246575 760 10 1 1084 3L:5761746-5761848 7 942.5 2309 FBgn0016756 596.6966667 13.13 20.13333333 1.579529521 71.78217822 46.81291391 -2 -2 -2 0.15 dme-miR-11-3p 7mer-m1 TGTGATG 3L 576386 576392 + 3L_576386_576392_+ 0.612071093 0.612071103 0.612071098 0 hipk FBtr0072552 574200 581099 3L + 576102 576567 3'utr hipk FlyBase G26826.1 TCGTAGTTAGAATTAAACTTAACTTTCGCGATAAAATAACCAAGCAGCAACTAATTTTTCGCCCTCCTGGGGTCGATTACTCGGTTGTCCCAACCGAGAATTTATTAAAATCGGTCCTTCGAGGGAGGCACTTCCTATATAATGAATTACATGCTGATACAAAGCAGAAATATTTAAACCATCCTTCGCCCCTTCCTAGATCAGCTGTGTACAGTAGGCTATTTTGGGATCGGGATCGAGATGAATCAACTCCGACGATTGGAAAAGATCTAGCATATAATTATTGTGATGTAGTTTTTAACGAGGAGCAGAGAAGTCCGCAAACGTTTTTTGTCAGTCGTCGTCGTCGTCGTCGGCGAATAGAAATTACCTAAAATTACGAATAACCAATTGCGATACGGATACGGAATATGCATCTATATGTTAACTAATTAGTGTGCAGGATTCAATAGCGTTAGCACGACAA 2062 576384 0.895443614 90 1833 20753 0.89198172 1.553680794 0.374740341 0.143549952 0.266306606 2062 201 59 2147 3L:576102-576567 7 hipk FBtr0072552 574200 581099 TGTGATG 7mer-m1 dme-miR-11-3p 3L + 576212 576418 3'utr hipk FlyBase G20292.1 TCGGTCCTTCGAGGGAGGCACTTCCTATATAATGAATTACATGCTGATACAAAGCAGAAATATTTAAACCATCCTTCGCCCCTTCCTAGATCAGCTGTGTACAGTAGGCTATTTTGGGATCGGGATCGAGATGAATCAACTCCGACGATTGGAAAAGATCTAGCATATAATTATTGTGATGTAGTTTTTAACGAGGAGCAGAGAAGT 1293 576384 0.863780343 34 1041 14107 0.799591002 1.28575173 0.440695297 0.373549884 0.585889571 1293 312 80 1564 3L:576212-576418 7 1390 2310 FBgn0035142 10724.84 157.7366667 241.6366667 0.129605663 8.81215528 5.752438234 2 2 2 0.15 dme-miR-970-3p 7mer-A1 CTTATGA 3L 577254 577260 + 3L_577254_577260_+ 0.820950886 0.822093962 0.821522424 0.000808294 hipk FBtr0072552 574200 581099 3L + 577196 577276 3'utr hipk FlyBase G26827.4 AAAACAAGAAAACAAATCATGAACGCTTTAAATGTAACAAAAACGAAACGTTAATAGACTTATGAAAACAACAAACAAATT 569 577250 0.958469704 11 552 2852 0.973611111 2.368596763 0.118055556 0.20913884 0.375 569 17 2 701 3L:577196-577276 7 hipk FBtr0072552 574200 581099 CTTATGA 7mer-A1 dme-miR-970-3p 3L + 577196 577277 3'utr hipk FlyBase G20296.1 AAAACAAGAAAACAAATCATGAACGCTTTAAATGTAACAAAAACGAAACGTTAATAGACTTATGAAAACAACAAACAAATTA 414 577250 0.954887489 10 405 2070 0.979166667 2.183981219 0.088141026 0.376811594 0.586538462 414 10 3 611 3L:577196-577277 7 460.5 2311 FBgn0035142 10724.84 157.7366667 241.6366667 0.042937703 2.919422666 1.905753818 4 4 4 0.15 dme-miR-8-3p 6mer2-7 AGTATT 3L 577575 577580 + 3L_577575_577580_+ 0.973688734 0.999998727 0.98684373 0.018603979 hipk FBtr0072552 574200 581099 3L + 577361 577612 3'utr hipk FlyBase G26828.1 TTAAAGTTATATTAAACAAACTCACACTCAACAAATAAATAAGCAGGCAGGTGGACCACGGTCGTTAGCAGACTTTTGTGGCCCACTGTCGGAGGACTTGTATTTAGGAGGAACTCTGGGTGGCTTTCACCACCAGCGAAATGCGGAGAGATCCGCACAAACACTCTAATATACGTATATATTTAAATGAGAAATGTTTTAACTGTGTAGCCTTAGTATTTGTACTCGTCGTCCTCTCGATTTCCGACAAAA 358 577557 0.999951535 45 336 3222 0.934146341 1.88422877 0.146341463 0.125698324 0.236585366 358 23 4 383 3L:577361-577612 6 hipk FBtr0072552 574200 581099 AGTATT 6mer2-7 dme-miR-8-3p 3L + 577533 577639 3'utr hipk FlyBase G20298.1 ACGTATATATTTAAATGAGAAATGTTTTAACTGTGTAGCCTTAGTATTTGTACTCGTCGTCCTCTCGATTTCCGACAAAAATATGATGATATACGATACTGTAGGGC 170 577566 0.802425325 21 146 1635 0.873469388 1.631443769 0.093877551 0.317647059 0.526530612 170 27 4 214 3L:577533-577639 6 139 2312 FBgn0035142 10724.84 157.7366667 241.6366667 0.012960566 0.881215528 0.575243823 18 9 13.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 5777529 5777535 - 3L_5777529_5777535_- 0.750603412 0.753468171 0.752035792 0.00202572 Myt1 FBtr0077118|FBtr0077118|FBtr0077118 5777474|5777474|5777474 5777763|5777763|5777763 3L - 5777515 5777584 3'utr Myt1 FlyBase G34629.1 AATGTTAATGCTTCTTTAGAAGAACTTGTTGAACTTGAACATATAATCATGTGATATATATACGAAAAGC 28 5777539 0.853584963 9 23 197 0.921052632 1.243038049 0.184210526 0.25 0.447368421 28 2 1 35 3L:5777515-5777584 7 Myt1 FBtr0077118|FBtr0077118|FBtr0077118 5777474|5777474|5777474 5777763|5777763|5777763 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 5777498 5777555 3'utr Myt1 FlyBase G26181.1 TGAACTTGAACATATAATCATGTGATATATATACGAAAAGCGATTTGAAAAGTTTAAA 21 5777538 0.970630995 7 17 157 0.814814815 1.041392685 0.074074074 0.238095238 0.407407407 21 4 1 22 3L:5777498-5777555 7 19 2313 FBgn0040298 171.3866667 10.89333333 16.77 0.110860433 1.744186047 1.132975552 4 3 3.5 0.15 dme-miR-2b-2-5p 6mer3-8 TTGAAG 3L 5789991 5789996 - 3L_5789991_5789996_- 0.684795947 0.999824027 0.842309987 0.222758506 Bre1 FBtr0344538 5789829 5790544 3L - 5789977 5790016 3'utr Bre1 FlyBase G34637.1 TTTAAAAGTCGCGCTTTGCTTTGAAGGGCTGCTAACTTGG 14 5790000 0.686575056 5 14 105 1 1.204119983 0.3125 0.142857143 0.25 14 0 0 16 3L:5789977-5790016 6 Bre1 FBtr0344538 5789829 5790544 TTGAAG 6mer3-8 dme-miR-2b-2-5p 3L - 5789961 5790021 3'utr Bre1 FlyBase G26187.1 ATCCGTTTAAAAGTCGCGCTTTGCTTTGAAGGGCTGCTAACTTGGTTATAATTGATAAGTA 10 5789997 0.986866783 4 8 77 0.857142857 1.079181246 0.071428571 0.4 0.571428571 10 2 0 12 3L:5789961-5790021 6 11 2314 FBgn0086694 838.4133333 27.30333333 41.84333333 0.01312002 0.402881211 0.262885366 4 1 2.5 0.15 dme-miR-932-5p 6mer2-7 GAATTG 3L 5799004 5799009 - 3L_5799004_5799009_- 0.997249652 0.994781361 0.996015507 0.001745352 S6k FBtr0077114|FBtr0333264 5798946|5797547 5800429|5800429 3L - 5798976 5799039 3'utr S6k FlyBase G34651.1 AAGATGTCAAATATAATCAAAAGGTGCTTTGAATTGTTTAAAAAGACAAGACAACTACAGATTA 144 5799011 0.716662542 11 139 1020 0.969512195 1.900367129 0.018292683 0.125 0.231707317 144 4 1 159 3L:5798976-5799039 6 S6k FBtr0077114|FBtr0333264 5798946|5797547 5800429|5800429 GAATTG 6mer2-7 dme-miR-932-5p 3L - 5798997 5799039 3'utr S6k FlyBase G26200.1 AAGATGTCAAATATAATCAAAAGGTGCTTTGAATTGTTTAAAA 82 5799011 0.721595786 5 78 582 0.962616822 2.012837225 0 0.219512195 0.401869159 82 4 0 103 3L:5798997-5799039 6 110.5 2315 FBgn0015806 3238.726667 104.32 160.0233333 0.034118347 1.059240798 0.690524299 2 2 2 0.15 dme-miR-33-5p 7mer-A1 AATGCAA 3L 5812155 5812161 + 3L_5812155_5812161_+ 0.780601082 0.780561403 0.780581242 2.81E-05 CG5537 FBtr0310534 5811928 5812228 3L + 5812008 5812208 intron-3'utr CG5537 FlyBase G28303.1 CCTGCGTTGCGCTCCACTAACAAATGCTACCCTCTCTCACTCTGTTTCGTCCTCCAGATTGCATTTGAGACACACAGACAAATAGACGACCCCTGCGGCCAACCAAACTACTACTTAGCAACTGTTAGCTTTTCACAACTGGCTTTTAATGCAACTCTCAAATACGTTACGTTCGTTACGCACTATTGTAAATATAGAAAC 178 5812132 0.991458247 29 170 1114 0.952606635 2.303196057 0.09478673 0.151685393 0.28436019 178 10 0 201 3L:5812008-5812208 7 CG5537 FBtr0310534 5811928 5812228 AATGCAA 7mer-A1 dme-miR-33-5p 3L + 5812042 5812172 intron-3'utr CG5537 FlyBase G21437.1 TCTCACTCTGTTTCGTCCTCCAGATTGCATTTGAGACACACAGACAAATAGACGACCCCTGCGGCCAACCAAACTACTACTTAGCAACTGTTAGCTTTTCACAACTGGCTTTTAATGCAACTCTCAAATAC 100 5812157 0.990433733 16 93 650 0.956521739 2.187520721 0.093167702 0.41 0.633540373 100 7 0 154 3L:5812042-5812172 7 44 2316 FBgn0035639 210.32 23.03 35.33333333 0.209205021 1.910551455 1.245283019 23 -2 10.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3L 583302 583308 - 3L_583302_583308_- 0.661614057 0.661614291 0.661614174 1.41E-07 Kah FBtr0072563 582822 583983 3L - 583217 583365 3'utr Kah FlyBase G33054.1 AAGGCATTGATCGGCTTCCTGCTTCCGGCACGGAAGTCGTTCCAAAACGAGAGAATTTCTAGTCTTTATATTTAAATAAAGCGCACATTTGGCGAGATCGGGAGCATTCCCGATCCCATCCCCTTTTGTGCGTGGCGTTACTTTAAGCA 267 583309 0.864403061 18 255 2569 0.952229299 2.174641193 0.544585987 0.119850187 0.251592357 267 14 1 299 3L:583217-583365 7 Kah FBtr0072563 582822 583983 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3L - 583279 583327 3'utr Kah FlyBase G25003.1 GTTCCAAAACGAGAGAATTTCTAGTCTTTATATTTAAATAAAGCGCACA 180 583309 0.988777763 10 169 1757 0.948412698 1.679427897 0.511904762 0.3 0.5 180 9 4 239 3L:583279-583327 7 207.5 2317 FBgn0035144 229 9.92 15.31333333 0.906113537 20.91733871 13.55028298 1 1 1 0.15 dme-miR-31a-5p 7mer-A1 CTTGCCA 3L 583590 583596 - 3L_583590_583596_- 0.818727761 0.821105473 0.819916617 0.001681288 Kah FBtr0072563 582822 583983 3L - 583435 583745 3'utr Kah FlyBase G33055.2 CACAGCTCGTCGAACAGAAGAGTTCCCTCTTCTCGGAAAACTCCAAGGAAGGCGAGGTCATACACAGTAGATATAGAGAGACAAGGTTGGATCGATTCCCGATTGATCGTTTGATCTTCACTTAGTTGTAATAAGAGACTTCTTAGAGACTTGCCAAGAACAGCGACAAAAAACCAATGTAACCAGTATTTTTTTATAGCACATACGATTACCGATCGATCGGAGAGCGAAAGATATAGCATCCCAGCCCCAGACGATCGAACTCCGCAGCCAAGCTACAAACTTTACACATAGTCATCTAGCTTTATGAT 243 583603 0.983808384 46 227 1793 0.934782609 1.809559715 0.170289855 0.111111111 0.217391304 243 15 3 258 3L:583435-583745 7 Kah FBtr0072563 582822 583983 CTTGCCA 7mer-A1 dme-miR-31a-5p 3L - 583507 583705 3'utr Kah FlyBase G25007.1 CTCCAAGGAAGGCGAGGTCATACACAGTAGATATAGAGAGACAAGGTTGGATCGATTCCCGATTGATCGTTTGATCTTCACTTAGTTGTAATAAGAGACTTCTTAGAGACTTGCCAAGAACAGCGACAAAAAACCAATGTAACCAGTATTTTTTTATAGCACATACGATTACCGATCGATCGGAGAGCGAAAGATATAG 172 583603 0.984080487 37 158 1240 0.92519685 2.371067862 0.18503937 0.360465116 0.566929134 172 19 0 235 3L:583507-583705 7 67.5 2318 FBgn0035144 229 9.92 15.31333333 0.294759825 6.804435484 4.407923378 7 7 7 0.15 dme-bantam-3p 6mer3-8 TGATCT 3L 583629 583634 - 3L_583629_583634_- 0.927204738 0.818058922 0.87263183 0.077177735 Kah FBtr0072563 582822 583983 3L - 583435 583745 3'utr Kah FlyBase G33055.2 CACAGCTCGTCGAACAGAAGAGTTCCCTCTTCTCGGAAAACTCCAAGGAAGGCGAGGTCATACACAGTAGATATAGAGAGACAAGGTTGGATCGATTCCCGATTGATCGTTTGATCTTCACTTAGTTGTAATAAGAGACTTCTTAGAGACTTGCCAAGAACAGCGACAAAAAACCAATGTAACCAGTATTTTTTTATAGCACATACGATTACCGATCGATCGGAGAGCGAAAGATATAGCATCCCAGCCCCAGACGATCGAACTCCGCAGCCAAGCTACAAACTTTACACATAGTCATCTAGCTTTATGAT 243 583634 0.983808384 46 227 1793 0.934782609 1.809559715 0.170289855 0.111111111 0.217391304 243 15 3 258 3L:583435-583745 6 Kah FBtr0072563 582822 583983 TGATCT 6mer3-8 dme-bantam-3p 3L - 583507 583705 3'utr Kah FlyBase G25007.1 CTCCAAGGAAGGCGAGGTCATACACAGTAGATATAGAGAGACAAGGTTGGATCGATTCCCGATTGATCGTTTGATCTTCACTTAGTTGTAATAAGAGACTTCTTAGAGACTTGCCAAGAACAGCGACAAAAAACCAATGTAACCAGTATTTTTTTATAGCACATACGATTACCGATCGATCGGAGAGCGAAAGATATAG 172 583605 0.984080487 37 158 1240 0.92519685 2.371067862 0.18503937 0.360465116 0.566929134 172 19 0 235 3L:583507-583705 6 57.5 2319 FBgn0035144 229 9.92 15.31333333 0.251091703 5.796370968 3.754897693 0 -29 -14.5 0.15 dme-miR-184-5p 6mer3-8 TGATAA 3L 583807 583812 - 3L_583807_583812_- 0.496675869 0.50258847 0.499632169 0.00418084 Kah FBtr0072563 582822 583983 3L - 583749 583892 3'utr Kah FlyBase G33056.1 TGCCACTTAATCCAAGTCCTTTCACAGCCCACCAGCCACCACCAATCCAGGACATTTTCTTACTGTAGTCAACGAATATGTGATAATAATGCAAAAGAGCTAAAGTACCATTAGAGAGTAGATGATTCCAGAGCAAAGAGGAGC 148 583816 0.972201018 22 142 839 0.966292135 1.934498451 0.179775281 0.155405405 0.297752809 148 5 1 172 3L:583749-583892 6 Kah FBtr0072563 582822 583983 TGATAA 6mer3-8 dme-miR-184-5p 3L - 583755 583844 3'utr Kah FlyBase G25008.1 AGGACATTTTCTTACTGTAGTCAACGAATATGTGATAATAATGCAAAAGAGCTAAAGTACCATTAGAGAGTAGATGATTCCAGAGCAAAG 80 583816 0.721174301 13 74 436 0.938596491 1.552262523 0.192982456 0.3125 0.51754386 80 5 2 107 3L:583755-583844 6 82 2320 FBgn0035144 229 9.92 15.31333333 0.358078603 8.266129032 5.354810623 4 4 4 0.15 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3L 5928249 5928255 + 3L_5928249_5928255_+ 0.620176301 0.619097541 0.619636921 0.000762827 Vap-33B FBtr0306383 5926792 5930120 3L + 5928226 5928272 3'utr Vap-33B FlyBase G28311.1 CACCTTTGTCGATTCCGCTCCCATGGTGCTCAAGGAGACCAACATCA 12 5928249 0.967132978 3 12 66 1 1.146128036 0.071428571 0.166666667 0.285714286 12 0 0 14 3L:5928226-5928272 7 Vap-33B FBtr0306383 5926792 5930120 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3L + 5928224 5928263 3'utr Vap-33B FlyBase G21446.1 GTCACCTTTGTCGATTCCGCTCCCATGGTGCTCAAGGAGA 8 5928249 0.816999137 3 8 43 1 0.954242509 0.666666667 0.125 0.222222222 8 0 0 9 3L:5928224-5928263 7 10 2321 FBgn0053523 440.65 33.85333333 51.73666667 0.022693748 0.295391887 0.193286515 0 0 0 0.15 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 5929181 5929186 + 3L_5929181_5929186_+ 0.986959967 0.988764076 0.987862022 0.001275691 Vap-33B FBtr0306383 5926792 5930120 3L + 5929164 5929231 3'utr Vap-33B FlyBase G28313.1 GTGACGCTGGCGCTGTTGTTCCTGTTGTTTGCCGGCTTCGGCTTTCTGATGTACCAGCAGCTCGGCCA 16 5929180 0.989817243 6 14 141 0.9 0.954242509 0.65 0.125 0.3 16 1 1 18 3L:5929164-5929231 6 Vap-33B FBtr0306383 5926792 5930120 GTTCCT 6mer2-7 dme-miR-276a-3p 3L + 5929164 5929200 3'utr Vap-33B FlyBase G21448.1 GTGACGCTGGCGCTGTTGTTCCTGTTGTTTGCCGGCT 6 5929179 0.945783872 3 6 56 1 0.954242509 0.444444444 0.333333333 0.555555556 6 0 0 9 3L:5929164-5929200 6 9.5 2322 FBgn0053523 440.65 33.85333333 51.73666667 0.02155906 0.280622292 0.183622189 1 2 1.5 0.15 dme-miR-965-3p 8mer-A1 TACGCTTA 3L 5930509 5930516 - 3L_5930509_5930516_- 0.623770604 0.624921447 0.624346026 0.000813738 Rcc1 FBtr0077076|FBtr0077075|FBtr0077074 5930260|5930260|5930260 5930578|5930578|5930578 3L - 5930489 5930531 3'utr Rcc1 FlyBase G34677.2 TAAGTTACGAACCCGTACGCTTACCCTACGCTTAAGGAAGGCA 56 5930516 0.964751403 4 54 225 0.974025974 1.574031268 0.038961039 0.321428571 0.506493506 56 1 1 75 3L:5930489-5930531 8 Rcc1 FBtr0077076|FBtr0077075|FBtr0077074 5930260|5930260|5930260 5930578|5930578|5930578 TACGCTTA 8mer-A1 dme-miR-965-3p 3L - 5930446 5930530 3'utr Rcc1 FlyBase G26227.1 AAGTTACGAACCCGTACGCTTACCCTACGCTTAAGGAAGGCAATGAGTAGCCCAGATTCGTAAGATAGATCGGAAATTTTGCTTA 55 5930516 0.963896102 8 53 212 0.962025316 1.880813592 0.063291139 0.381818182 0.569620253 55 3 0 76 3L:5930446-5930530 8 53 2323 FBgn0002638 1072.403333 62.51333333 96.14666667 0.049421704 0.847819132 0.551241159 0 0 0 0.15 dme-miR-965-3p 6mer3-8 TACGCT 3L 5930560 5930565 - 3L_5930560_5930565_- 0.99961739 0.997372655 0.998495023 0.001587243 Rcc1 FBtr0077076|FBtr0077075|FBtr0077074 5930260|5930260|5930260 5930578|5930578|5930578 3L - 5930537 5930602 stop_codon Rcc1 FlyBase G34678.1 AAGCGGGGCGGTAAAAAGACATAAGATTGAGTATAAATACGCTGACTTTCCCACTTTGTTTTTGGT 28 5930565 0.949735432 7 26 167 0.939393939 1.491361694 0.454545455 0.178571429 0.303030303 28 2 0 31 3L:5930537-5930602 6 Rcc1 FBtr0077076|FBtr0077075|FBtr0077074 5930260|5930260|5930260 5930578|5930578|5930578 TACGCT 6mer3-8 dme-miR-965-3p 3L - 5930546 5930601 stop_codon Rcc1 FlyBase G26228.1 AGCGGGGCGGTAAAAAGACATAAGATTGAGTATAAATACGCTGACTTTCCCACTTT 25 5930565 0.837341976 6 21 143 0.888888889 1.505149978 0.555555556 0.36 0.555555556 25 4 0 32 3L:5930546-5930601 6 19 2324 FBgn0002638 1072.403333 62.51333333 96.14666667 0.017717215 0.30393516 0.197614755 0 0 0 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 6096463 6096469 + 3L_6096463_6096469_+ 0.79576817 0.795136188 0.795452179 0.000446891 loj FBtr0301446|FBtr0301446|FBtr0301446|FBtr0301447|FBtr0301447|FBtr0301447|FBtr0301448|FBtr0301448|FBtr0301448 6096261|6096261|6096261|6096261|6096261|6096261|6096261|6096261|6096261 6096517|6096517|6096517|6096517|6096517|6096517|6096517|6096517|6096517 3L + 6096368 6096486 3'utr loj FlyBase G28326.1 ATTTTATCACTGGCTAATTGATCAAGCGCAACTGAGCAGACTTTTTTATAATTGGGACTACTTATGTCATACGAGTTATAGACAGCAAAACTTATTGTGATAAGTGTACATTTGTGTGT 291 6096461 0.983343739 20 277 2110 0.95923913 1.50638202 0.41576087 0.223367698 0.385869565 291 5 10 353 3L:6096368-6096486 7 loj FBtr0301447|FBtr0301447|FBtr0301447|FBtr0301448|FBtr0301448|FBtr0301448|FBtr0301446|FBtr0301446|FBtr0301446 6096261|6096261|6096261|6096261|6096261|6096261|6096261|6096261|6096261 6096517|6096517|6096517|6096517|6096517|6096517|6096517|6096517|6096517 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 6096386 6096480 3'utr loj FlyBase G21456.1 TGATCAAGCGCAACTGAGCAGACTTTTTTATAATTGGGACTACTTATGTCATACGAGTTATAGACAGCAAAACTTATTGTGATAAGTGTACATTT 197 6096461 0.771146132 16 181 1386 0.935153584 1.437750563 0.464163823 0.370558376 0.576791809 197 10 9 274 3L:6096386-6096480 7 144.5 2325 FBgn0061492 141.6666667 16.32666667 25.11333333 1.02 8.850551245 5.753915583 2 2 2 0.15 dme-miR-12-5p 7mer-m8 AATACTC 3L 6169335 6169341 - 3L_6169335_6169341_- 0.631842403 0.674463162 0.653152783 0.030137457 CG10289 FBtr0331790|FBtr0077019 6164914|6167311 6169800|6169800 3L - 6169256 6169403 3'utr CG10289 FlyBase G34702.1 AAGAAAACTGTATTTTGTTTGTAATATGTATTAGTCTGTCGATTTAGTACGCTTTTACTTTCAATACTCTCAATGTGTTAGGCAACCTATGAGCATTACTTAAAGTACCAAAATTCACGCAACGTTTAGAATGCTTAGTTTATATTTG 47 6169348 0.98962322 17 43 418 0.909090909 1.397940009 0.181818182 0.14893617 0.272727273 47 4 1 50 3L:6169256-6169403 7 CG10289 FBtr0077019|FBtr0331790 6167311|6164914 6169800|6169800 AATACTC 7mer-m8 dme-miR-12-5p 3L - 6169302 6169366 3'utr CG10289 FlyBase G26239.1 GTCGATTTAGTACGCTTTTACTTTCAATACTCTCAATGTGTTAGGCAACCTATGAGCATTACTTA 14 6169339 0.988631932 5 10 124 0.8 1 0.4 0.428571429 0.68 14 4 1 20 3L:6169302-6169366 7 13.5 2326 FBgn0035688 1894.98 44.00666667 67.31 0.007124086 0.306771701 0.200564552 7 -2 2.5 0.15 dme-miR-995-5p 6mer3-8 AATTCG 3L 6178832 6178837 - 3L_6178832_6178837_- 0.96617711 0.972404818 0.969290964 0.004403649 CG10274 FBtr0113149 6178675 6179056 3L - 6178810 6178862 3'utr CG10274 FlyBase G34722.1 CAGGAGAACACAGAATACCTATGTGAATTCGACTTAAGTTTAATGATTCTGGT 26 6178835 0.971570844 4 24 144 0.942857143 1.041392685 0.171428571 0.269230769 0.457142857 26 0 2 33 3L:6178810-6178862 6 CG10274 FBtr0113149 6178675 6179056 AATTCG 6mer3-8 dme-miR-995-5p 3L - 6178821 6178861 3'utr CG10274 FlyBase G26257.2 AGGAGAACACAGAATACCTATGTGAATTCGACTTAAGTTTA 15 6178836 0.975184735 3 12 76 0.842105263 0.602059991 0.052631579 0.266666667 0.421052632 15 0 3 16 3L:6178821-6178861 6 16.5 2327 FBgn0035690 331.03 13.22333333 20.28333333 0.049844425 1.247794303 0.81347576 -2 -1 -1.5 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 6178851 6178857 + 3L_6178851_6178857_+ 0.647003779 0.661615506 0.654309643 0.010332032 CG7376 FBtr0331788 6178643 6178941 3L + 6178828 6178883 3'utr CG7376 FlyBase G28336.1 AAGTCGAATTCACATAGGTATTCTGTGTTCTCCTGAATAATGTACAGTATTATTTG 7 6178854 0.984311664 5 7 64 1 1.041392685 0.454545455 0.428571429 0.636363636 7 0 0 11 3L:6178828-6178883 7 CG7376 FBtr0331788 6178643 6178941 TGTGTTC 7mer-m8 dme-miR-317-3p 3L + 6178833 6178883 3'utr CG7376 FlyBase G21459.1 GAATTCACATAGGTATTCTGTGTTCTCCTGAATAATGTACAGTATTATTTG 7 6178848 0.990218748 6 7 68 1 1.041392685 0.363636364 0.428571429 0.636363636 7 0 0 11 3L:6178833-6178883 7 5.5 2328 FBgn0035689 292.97 8.566666667 13.15333333 0.018773253 0.642023346 0.418144957 -3 3 0 0.15 dme-miR-283-5p 6mer3-8 TGATAT 3L 6178942 6178947 - 3L_6178942_6178947_- 0.99987447 0.999813346 0.999843908 4.33E-05 CG10274 FBtr0113149 6178675 6179056 3L - 6178930 6178971 3'utr CG10274 FlyBase G34724.1 AGAACAGTGTGTGTAAGATGGATATGATATAGTTTTAAGCTG 9 6178952 0.885437843 4 8 76 1 1.176091259 0.4 0.222222222 0.533333333 9 0 0 15 3L:6178930-6178971 6 CG10274 FBtr0113149 6178675 6179056 TGATAT 6mer3-8 dme-miR-283-5p 3L - 6178927 6178966 3'utr CG10274 FlyBase G26258.1 AGTGTGTGTAAGATGGATATGATATAGTTTTAAGCTGAAA 10 6178953 0.880486114 5 9 81 1 1.176091259 0.266666667 0.4 0.6 10 0 0 15 3L:6178927-6178966 6 8.5 2329 FBgn0035690 331.03 13.22333333 20.28333333 0.025677431 0.642803126 0.41906327 5 6 5.5 0.15 dme-bantam-3p 6mer3-8 TGATCT 3L 6182276 6182281 - 3L_6182276_6182281_- 0.999969188 0.999958363 0.999963775 7.64E-06 D19B FBtr0077017 6182174 6182416 3L - 6182243 6182307 3'utr D19B FlyBase G34732.1 CAACTAGTTTTCGTCACTTTGCAATTTGATCTTTTTTGTATTTAAATCCCCCCTTTAAACTGCTT 55 6182282 0.791990291 12 53 692 0.96969697 1.806179974 0.121212121 0.181818182 0.318181818 55 2 0 64 3L:6182243-6182307 6 D19B FBtr0077017 6182174 6182416 TGATCT 6mer3-8 dme-bantam-3p 3L - 6182234 6182299 3'utr D19B FlyBase G26262.1 TTTCGTCACTTTGCAATTTGATCTTTTTTGTATTTAAATCCCCCCTTTAAACTGCTTAAGTTTGTA 39 6182282 0.988137582 9 36 452 0.942307692 1.69019608 0.019230769 0.282051282 0.461538462 39 3 0 49 3L:6182234-6182299 6 41 2330 FBgn0022699 264.21 11.84 18.04333333 0.155179592 3.462837838 2.272307408 1 1 1 0.15 dme-miR-318-3p 7mer-A1 CCAGTGA 3L 6186016 6186022 - 3L_6186016_6186022_- 0.727528817 0.8232813 0.775405058 0.067707242 D19A FBtr0077016 6185828 6186380 3L - 6186000 6186031 3'utr D19A FlyBase G34742.1 TTTGCAATACCAGTGATTTTTACAAATATATT 6 6186014 0.928917111 3 6 48 1 1.079181246 0.25 0.833333333 0.916666667 6 0 0 12 3L:6186000-6186031 7 D19A FBtr0077016 6185828 6186380 CCAGTGA 7mer-A1 dme-miR-318-3p 3L - 6185998 6186033 3'utr D19A FlyBase G26266.1 ACTTTGCAATACCAGTGATTTTTACAAATATATTTT 8 6186013 0.986024159 3 6 64 0.8 0.602059991 0.2 0.25 0.4 8 1 1 8 3L:6185998-6186033 7 7 2331 FBgn0022935 233.1233333 8.756666667 13.45 0.030027024 0.79939094 0.520446097 -8 -9 -8.5 0.15 dme-miR-33-5p 7mer-m8 CAATGCA 3L 6186303 6186309 - 3L_6186303_6186309_- 0.663733261 0.660760461 0.662246861 0.002102087 D19A FBtr0077016 6185828 6186380 3L - 6186221 6186409 stop_codon D19A FlyBase G34743.1 TGGATGCCCTGAAGATCGACCACGTCTAGGCAGCAGGATTGGCTTTACTTTACTAGCATATATGCATCATAACCTAGCCACATCCATATGTATCCACTTCCAATGCAGCTGACACTGTCCGGAAAAGTTGTAGGCATGCCTCGAATTGCTCTCTAGCTGGATCAGATTGTAGGTTTATAGGCACTCCAG 89 6186306 0.975116679 19 88 566 0.990566038 2.021189299 0.141509434 0.168539326 0.301886792 89 1 0 105 3L:6186221-6186409 7 D19A FBtr0077016 6185828 6186380 CAATGCA 7mer-m8 dme-miR-33-5p 3L - 6186220 6186322 3'utr D19A FlyBase G26267.1 ATGTATCCACTTCCAATGCAGCTGACACTGTCCGGAAAAGTTGTAGGCATGCCTCGAATTGCTCTCTAGCTGGATCAGATTGTAGGTTTATAGGCACTCCAGA 39 6186306 0.927633539 10 38 257 0.983606557 1.77815125 0.213114754 0.435897436 0.639344262 39 1 0 60 3L:6186220-6186322 7 29 2332 FBgn0022935 233.1233333 8.756666667 13.45 0.124397672 3.311762467 2.156133829 -3 -3 -3 0.15 dme-miR-970-3p 6mer2-7 CTTATG 3L 6192360 6192365 - 3L_6192360_6192365_- 0.981041668 0.897778101 0.939409884 0.058876256 CG13298 FBtr0077015 6192122 6192480 3L - 6192342 6192386 3'utr CG13298 FlyBase G34750.1 TTTAGGGAACTTCTTGCTCTGCTTATGTGTATACCAAATTTTTGC 17 6192364 0.973666618 5 16 148 1 1.301029996 0.1 0.176470588 0.3 17 0 0 20 3L:6192342-6192386 6 CG13298 FBtr0077015 6192122 6192480 CTTATG 6mer2-7 dme-miR-970-3p 3L - 6192347 6192387 3'utr CG13298 FlyBase G26271.1 GTTTAGGGAACTTCTTGCTCTGCTTATGTGTATACCAAATT 11 6192364 0.596580178 6 11 102 1 1.230448921 0.058823529 0.272727273 0.529411765 11 0 0 17 3L:6192347-6192387 6 13 2333 FBgn0035692 547.6666667 75.45333333 115.9233333 0.023737066 0.172291924 0.112143083 -1 -1 -1 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 6198119 6198125 + 3L_6198119_6198125_+ 0.661543602 0.661529431 0.661536516 1.00E-05 Trn FBtr0077001|FBtr0333059|FBtr0077002|FBtr0077000 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 3L + 6198007 6198175 3'utr Trn FlyBase G28355.1 AAGCTAGAGGATCTTTGATCTGTAGAACCTCTTTAGGCACACGACTGTCCGCTTACAGCATATAAAATGCCTTTCTTGTGCAGAAAACTTAGTAGGAACCACTAGAAAATTATGTGTTCCGGCCGTACTTAACCGGAGTCAGTGCTATAGCAGATATGCCCCATTCTCC 36 6198117 0.941499819 14 34 234 0.976190476 1.612783857 0.166666667 0.138888889 0.261904762 36 1 0 41 3L:6198007-6198175 7 Trn FBtr0077002|FBtr0077000|FBtr0077001|FBtr0333059 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 TGTGTTC 7mer-m8 dme-miR-317-3p 3L + 6198100 6198133 3'utr Trn FlyBase G21469.1 AGGAACCACTAGAAAATTATGTGTTCCGGCCGTA 7 6198116 0.781381192 2 7 40 1 0.954242509 0.555555556 0.285714286 0.444444444 7 0 0 9 3L:6198100-6198133 7 11.5 2334 FBgn0024921 2762.84 61.57666667 94.85333333 0.004162384 0.186759054 0.121239809 2 3 2.5 0.15 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 6198441 6198448 + 3L_6198441_6198448_+ 0.504783617 0.643564225 0.574173921 0.098132703 Trn FBtr0077001|FBtr0333059|FBtr0077002|FBtr0077000 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 3L + 6198398 6198457 3'utr Trn FlyBase G28356.1 GGATTCAATGGCAGGTGCACACAAAATTGTTACAAATCAAACAAAGACTGATGTTCAACT 10 6198450 0.940774064 5 10 43 1 1.176091259 0 0.5 0.666666667 10 0 0 15 3L:6198398-6198457 8 Trn FBtr0077002|FBtr0077000|FBtr0077001|FBtr0333059 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 AAGACTGA 8mer-A1 dme-miR-14-3p 3L + 6198429 6198457 3'utr Trn FlyBase G21470.1 ACAAATCAAACAAAGACTGATGTTCAACT 9 6198449 0.777188964 2 7 40 0.8 0.602059991 0 0.111111111 0.2 9 1 1 8 3L:6198429-6198457 8 8.5 2335 FBgn0024921 2762.84 61.57666667 94.85333333 0.003076544 0.138039301 0.089612033 -9 -8 -8.5 0.15 dme-miR-304-5p 8mer-A1 TGAGATTA 3L 6198831 6198838 + 3L_6198831_6198838_+ 0.625295626 0.624227826 0.624761726 0.000755049 Trn FBtr0077001|FBtr0333059|FBtr0077002|FBtr0077000 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 3L + 6198812 6198849 3'utr Trn FlyBase G28359.1 TAGGGAAACATTGTAAAATTGAGATTAGGATTTTGTTG 19 6198830 0.795807157 6 18 138 0.961538462 1.397940009 0.115384615 0.368421053 0.538461538 19 1 0 25 3L:6198812-6198849 8 Trn FBtr0077002|FBtr0077000|FBtr0077001|FBtr0333059 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 TGAGATTA 8mer-A1 dme-miR-304-5p 3L + 6198809 6198859 3'utr Trn FlyBase G21473.1 AAATAGGGAAACATTGTAAAATTGAGATTAGGATTTTGTTGAATATCTTAT 17 6198830 0.969663796 4 16 137 0.966666667 1.462397998 0.2 0.411764706 0.666666667 17 1 0 29 3L:6198809-6198859 8 18 2336 FBgn0024921 2762.84 61.57666667 94.85333333 0.006515035 0.292318519 0.189766657 1 1 1 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 3L 6198893 6198898 + 3L_6198893_6198898_+ 0.980298047 0.967061052 0.973679549 0.009359902 Trn FBtr0077001|FBtr0333059|FBtr0077002|FBtr0077000 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 3L + 6198865 6198920 3'utr Trn FlyBase G28360.1 TTCCATTAACTGAATACAAAAGCAACCATTGACTGATCACTTTTTAAAGTATTATT 137 6198893 0.829518982 9 131 540 0.955307263 1.278753601 0 0.233576642 0.413407821 137 0 8 171 3L:6198865-6198920 6 Trn FBtr0077002|FBtr0077000|FBtr0077001|FBtr0333059 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 TTGACT 6mer3-8 dme-miR-1012-3p 3L + 6198862 6198972 3'utr Trn FlyBase G21474.1 ATTTTCCATTAACTGAATACAAAAGCAACCATTGACTGATCACTTTTTAAAGTATTATTATATAATTTTTTTTTGTATAGGGACAAGTGTAATTAATGAACTATTATTATT 130 6198893 0.916817379 13 126 530 0.978947368 2.269512944 0.031578947 0.315384615 0.531578947 130 4 0 186 3L:6198862-6198972 6 127 2337 FBgn0024921 2762.84 61.57666667 94.85333333 0.045967193 2.06246955 1.338909193 0 0 0 0.15 dme-miR-304-5p 7mer-A1 GAGATTA 3L 6486510 6486516 - 3L_6486510_6486516_- 0.822726992 0.81175888 0.817242936 0.007755618 CG10147 FBtr0333060 6486165 6486934 3L - 6486483 6486522 3'utr CG10147 FlyBase G34827.1 CAAGAAGAGATTATGAATGGAGACAATAACCCTTAATAAC 5 6486507 0.81015869 4 5 19 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 3L:6486483-6486522 7 CG10147 FBtr0333060 6486165 6486934 GAGATTA 7mer-A1 dme-miR-304-5p 3L - 6486482 6486521 3'utr CG10147 FlyBase G26353.1 AAGAAGAGATTATGAATGGAGACAATAACCCTTAATAACA 6 6486508 0.91971515 4 6 22 1 0.77815125 0 0 0 6 0 0 6 3L:6486482-6486521 7 4.5 2338 FBgn0035702 164.6666667 9.066666667 13.86666667 0.027327935 0.496323529 0.324519231 -9 -8 -8.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3L 6486769 6486774 - 3L_6486769_6486774_- 0.58816421 0.979843161 0.784003685 0.276958877 CG10147 FBtr0333060|FBtr0076987 6486165|6486595 6486934|6486934 3L - 6486730 6486787 3'utr CG10147 FlyBase G34828.1 AATTTTTAATAAACTAGTCTTAGTTTCTAATGGCACAAATACATGCCATTTTACCCTT 24 6486768 0.748387282 5 21 251 0.884615385 1.06069784 0.038461538 0.083333333 0.153846154 24 2 1 23 3L:6486730-6486787 6 CG10147 FBtr0076987|FBtr0333060 6486595|6486165 6486934|6486934 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3L - 6486730 6486784 3'utr CG10147 FlyBase G26354.1 TTTTAATAAACTAGTCTTAGTTTCTAATGGCACAAATACATGCCATTTTACCCTT 17 6486767 0.755058102 7 17 162 1 1.397940009 0 0.352941176 0.56 17 0 0 25 3L:6486730-6486784 6 16 2339 FBgn0035702 164.6666667 9.066666667 13.86666667 0.097165992 1.764705882 1.153846154 -6 -7 -6.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 651643 651649 - 3L_651643_651649_- 0.711028796 0.747770231 0.729399513 0.025980093 CG3402 FBtr0072559|FBtr0072559|FBtr0072559 651540|651540|651540 652087|652087|652087 3L - 651556 651697 3'utr CG3402 FlyBase G33073.1 AGCCGAACGCAGAGTTGTTGAAAGAAACATACATTCATAGTACATACTTGTGATAAATGACTTTAACTGTGCAGATATGTGCGAAGAAGGCGCATCACTTAAGTTTAAAATTGAGTTTTTAATGTTATATTGCATTTGAATA 219 651650 0.984923939 18 198 1606 0.896296296 1.383815366 0.103703704 0.168949772 0.325925926 219 19 9 242 3L:651556-651697 7 CG3402 FBtr0072559|FBtr0072559|FBtr0072559 651540|651540|651540 652087|652087|652087 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 651593 651675 3'utr CG3402 FlyBase G25015.1 AGAAACATACATTCATAGTACATACTTGTGATAAATGACTTTAACTGTGCAGATATGTGCGAAGAAGGCGCATCACTTAAGTT 158 651650 0.879725045 11 140 1146 0.87398374 1.101989539 0.166666667 0.411392405 0.62195122 158 15 16 215 3L:651593-651675 7 176 2340 FBgn0035148 1763.92 212.3 323.94 0.099777768 0.829015544 0.54331049 1 1 1 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 6549759 6549764 + 3L_6549759_6549764_+ 0.912633401 0.930736938 0.921685169 0.012801108 sfl FBtr0076968|FBtr0301562 6548788|6548788 6550104|6550104 3L + 6549746 6549793 3'utr sfl FlyBase G28377.1 CAGAAACTTCTGTGTACCTTAAGCATTTCAAATCCATGCCACGACTGT 7 6549758 0.978295849 3 7 44 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 3L:6549746-6549793 6 sfl FBtr0076968|FBtr0301562 6548788|6548788 6550104|6550104 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 6549741 6549810 3'utr sfl FlyBase G21483.1 AGCCACAGAAACTTCTGTGTACCTTAAGCATTTCAAATCCATGCCACGACTGTGACTTTGTTCCAGCAGT 11 6549757 0.937116701 6 11 69 1 1.146128036 0.071428571 0.272727273 0.428571429 11 0 0 14 3L:6549741-6549810 6 5.5 2341 FBgn0020251 430.2866667 9.026666667 13.86333333 0.012782176 0.609305761 0.396729983 1 2 1.5 0.15 dme-miR-986-5p 7mer-m8 ATTCGAG 3L 657921 657927 + 3L_657921_657927_+ 0.57637967 0.566156522 0.571268096 0.007228894 Rev1 FBtr0072557 657793 657971 3L + 657848 657957 3'utr Rev1 FlyBase G26877.1 TAATGTAACGCCAAGCTATGAATGCGGCCAGCTGATAATGTTAATGAGCCATTAGTTTATAAGCCATCCATTAATTCGAGCCAAAAATAAAACATTCTGGTAAAGAAAAT 60 657921 0.982377421 15 47 355 0.763157895 1.161368002 0.065789474 0.166666667 0.342105263 60 15 3 58 3L:657848-657957 7 Rev1 FBtr0072557 657793 657971 ATTCGAG 7mer-m8 dme-miR-986-5p 3L + 657841 657938 3'utr Rev1 FlyBase G20338.1 ATTATAATAATGTAACGCCAAGCTATGAATGCGGCCAGCTGATAATGTTAATGAGCCATTAGTTTATAAGCCATCCATTAATTCGAGCCAAAAATAAA 42 657920 0.980466558 13 34 240 0.828125 1.72427587 0.078125 0.380952381 0.59375 42 11 0 53 3L:657841-657938 7 23.5 2342 FBgn0035150 1798.706667 67.56666667 104.0266667 0.013064943 0.347804637 0.225903614 0 1 0.5 0.15 dme-miR-34-5p 6mer3-8 CACTGC 3L 6689797 6689802 - 3L_6689797_6689802_- 0.999996939 0.999999895 0.999998417 2.12E-06 SP1173 FBtr0076960|FBtr0076959|FBtr0076961|FBtr0076958 6689697|6689325|6689325|6689325 6689965|6689965|6689965|6689965 3L - 6689780 6689812 3'utr SP1173 FlyBase G34844.1 TTGAGGGCAACACTGCTAATAGTTTGTAATGCG 6 6689796 0.797776776 2 6 37 1 0.903089987 0 0.333333333 0.5 6 0 0 8 3L:6689780-6689812 6 SP1173 FBtr0076961|FBtr0076958|FBtr0076960|FBtr0076959 6689325|6689325|6689697|6689325 6689965|6689965|6689965|6689965 CACTGC 6mer3-8 dme-miR-34-5p 3L - 6689714 6689811 3'utr SP1173 FlyBase G26364.1 TGAGGGCAACACTGCTAATAGTTTGTAATGCGTATTTTTGCTAAGTGTATACACCAGGAGGATGAAAAGCAAAGGAGTGGAGACGATTAAAACAAAAA 9 6689796 0.980786037 7 9 66 1 1.113943352 0.307692308 0.333333333 0.538461538 9 0 0 13 3L:6689714-6689811 6 4.5 2343 FBgn0035710 0.666666667 0.03 0.043333333 6.75 150 103.8461538 -6 -6 -6 0.15 dme-miR-283-5p 7mer-m8 TGATATT 3L 6689873 6689879 - 3L_6689873_6689879_- 0.620150627 0.620190308 0.620170468 2.81E-05 SP1173 FBtr0076960|FBtr0076959|FBtr0076961|FBtr0076958 6689697|6689325|6689325|6689325 6689965|6689965|6689965|6689965 3L - 6689828 6689892 3'utr SP1173 FlyBase G34845.1 AATCGAGTGCGAATGATATTCTTAGTTTTTAAATGTGTACACCACGCCTCGTCCTCCTCCACCTA 17 6689871 0.988633972 7 16 151 1 1.230448921 0.352941176 0 0 17 0 0 17 3L:6689828-6689892 7 SP1173 FBtr0076961|FBtr0076958|FBtr0076960|FBtr0076959 6689325|6689325|6689697|6689325 6689965|6689965|6689965|6689965 TGATATT 7mer-m8 dme-miR-283-5p 3L - 6689853 6689894 3'utr SP1173 FlyBase G26365.1 CAAATCGAGTGCGAATGATATTCTTAGTTTTTAAATGTGTAC 12 6689871 0.724554945 4 11 130 0.928571429 0.812913357 0.642857143 0.166666667 0.285714286 12 0 1 13 3L:6689853-6689894 7 12 2344 FBgn0035710 0.666666667 0.03 0.043333333 18 400 276.9230769 -8 -8 -8 0.15 dme-miR-33-5p 7mer-A1 AATGCAA 3L 6729690 6729696 - 3L_6729690_6729696_- 0.472924151 0.746957254 0.609940702 0.193770663 dikar FBtr0303750|FBtr0333047 6728798|6728798 6730470|6730470 3L - 6729618 6729718 3'utr dikar FlyBase G34857.1 AAGCAGAAAACGAAAGAGAAATAATGCAAAAATTCAAAGAATTACTCTCAAGCCCCCCCTGACTATAATTAGATTTTAGTTTTTTCCAGAACCTAACTCGT 58 6729677 0.982134983 8 53 263 0.936507937 1.770852012 0.111111111 0.051724138 0.126984127 58 4 0 59 3L:6729618-6729718 7 dikar FBtr0333047|FBtr0303750 6728798|6728798 6730470|6730470 AATGCAA 7mer-A1 dme-miR-33-5p 3L - 6729598 6729711 3'utr dikar FlyBase G26371.1 AAACGAAAGAGAAATAATGCAAAAATTCAAAGAATTACTCTCAAGCCCCCCCTGACTATAATTAGATTTTAGTTTTTTCCAGAACCTAACTCGTAACTATAGAACTCGTGTAAA 24 6729677 0.961125274 10 22 112 0.9375 1.176091259 0.03125 0.291666667 0.46875 24 1 1 30 3L:6729598-6729711 7 12.5 2345 FBgn0261934 1905.406667 25.77666667 39.66 0.006560279 0.484934695 0.315179022 -19 -19 -19 0.15 dme-bantam-3p 7mer-A1 GATCTCA 3L 6739185 6739191 - 3L_6739185_6739191_- 0.822498875 0.823301588 0.822900232 0.000567595 dikar FBtr0303751 6738526 6740644 3L - 6739164 6739201 5'utr dikar FlyBase G34866.1 AAGTATTGCCGATCTCAGTCTGCCCTCGCCGGTGGCAC 15 6739183 0.721318932 4 15 101 1 1.230448921 0.176470588 0.133333333 0.235294118 15 0 0 17 3L:6739164-6739201 7 dikar FBtr0303751 6738526 6740644 GATCTCA 7mer-A1 dme-bantam-3p 3L - 6739164 6739201 5'utr dikar FlyBase G26378.1 AAGTATTGCCGATCTCAGTCTGCCCTCGCCGGTGGCAC 8 6739182 0.656678179 6 8 55 1 1.041392685 0.090909091 0.25 0.454545455 8 0 0 11 3L:6739164-6739201 7 11.5 2346 FBgn0261934 1905.406667 25.77666667 39.66 0.006035457 0.44613992 0.2899647 -8 -9 -8.5 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 3L 6744486 6744491 - 3L_6744486_6744491_- 0.536789917 0.506926021 0.521857969 0.021116966 velo FBtr0076950|FBtr0076951|FBtr0076952|FBtr0345025 6744424|6744424|6744424|6744424 6744638|6744638|6744638|6744638 3L - 6744432 6744525 3'utr velo FlyBase G34870.1 TACATCGGTTATTCAATTCTATGTATCTAAACGTTTGACTCTAAAAAACTACACTAAACTAAAACTATAAATAAAGACTAAATTACTATGTATG 58 6744491 0.744957535 12 53 399 0.941176471 1.505149978 0.073529412 0.137931034 0.264705882 58 3 1 64 3L:6744432-6744525 6 velo FBtr0076950|FBtr0076951|FBtr0076952|FBtr0345025 6744424|6744424|6744424|6744424 6744638|6744638|6744638|6744638 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 6744474 6744525 3'utr velo FlyBase G26381.1 TACATCGGTTATTCAATTCTATGTATCTAAACGTTTGACTCTAAAAAACTAC 22 6744491 0.755451996 5 22 160 1 1.431363764 0 0.181818182 0.333333333 22 0 0 27 3L:6744474-6744525 6 23.5 2347 FBgn0035713 1469.223333 41.72 63.81666667 0.015994845 0.563279003 0.368242361 0 0 0 0.15 dme-bantam-3p 6mer3-8 TGATCT 3L 691988 691993 - 3L_691988_691993_- 0.957154853 0.908503355 0.932829104 0.034401806 Vti1 FBtr0072607 691484 692021 3L - 691947 692018 3'utr Vti1 FlyBase G33100.1 TTTTAGCTAGCAAACCAATAGCCAATGATCTTAGCCCAAATTCAAATGTTATAGAAGCCTGTCCATTCCAAT 46 691993 0.851656532 9 45 220 0.982758621 1.755874856 0.051724138 0.260869565 0.413793103 46 1 0 57 3L:691947-692018 6 Vti1 FBtr0072607 691484 692021 TGATCT 6mer3-8 dme-bantam-3p 3L - 691950 692007 3'utr Vti1 FlyBase G25043.1 AAACCAATAGCCAATGATCTTAGCCCAAATTCAAATGTTATAGAAGCCTGTCCATTCC 39 691993 0.858704861 7 38 200 0.980392157 1.698970004 0.098039216 0.282051282 0.450980392 39 1 0 50 3L:691950-692007 6 34.5 2348 FBgn0260862 79.26 7.14 10.99 0.435276306 4.831932773 3.13921747 0 0 0 0.15 dme-miR-965-3p 7mer-m8 TACGCTT 3L 6950083 6950089 - 3L_6950083_6950089_- 0.620203375 0.62016154 0.620182457 2.96E-05 CG10077 FBtr0333083|FBtr0076940 6949489|6949489 6950329|6950329 3L - 6950037 6950178 3'utr CG10077 FlyBase G34895.1 ATGTTAGATGAGCGTCGGTGATGTACGTATCGTGTAGATCTCCTCCGCCCACATCATAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTTTTAATTTGATTAATCTCTTTGTTCCCCCCAAAACAAAACAAAACAA 460 6950061 0.982828116 29 428 3238 0.937172775 1.729974286 0.188481675 0.2 0.357766143 460 27 9 537 3L:6950037-6950178 7 CG10077 FBtr0076940|FBtr0333083 6949489|6949489 6950329|6950329 TACGCTT 7mer-m8 dme-miR-965-3p 3L - 6950039 6950186 3'utr CG10077 FlyBase G26404.1 GAGGGAAGATGTTAGATGAGCGTCGGTGATGTACGTATCGTGTAGATCTCCTCCGCCCACATCATAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTTTTAATTTGATTAATCTCTTTGTTCCCCCCAAAACAAAACAAAAC 374 6950061 0.979506461 28 359 2482 0.956603774 1.75076545 0.186792453 0.312834225 0.51509434 374 15 8 507 3L:6950039-6950186 7 143 2349 FBgn0035720 1853.276667 63.62 96.59333333 0.077160633 2.247720843 1.480433432 -28 -28 -28 0.15 dme-miR-282-5p 8mer-A1 AGAGGCTA 3L 6950305 6950312 - 3L_6950305_6950312_- 0.636383968 0.636378238 0.636381103 4.10E-06 CG10077 FBtr0333083|FBtr0076940 6949489|6949489 6950329|6950329 3L - 6950218 6950409 stop_codon CG10077 FlyBase G34896.1 CGCAGGCGGCACCCTATATGATGGCGAACGGCGGCGACATCTTTGCCTATCCGCCGCCTCCGCTGCCTGTGCAGAACTAGAGGCCCTGCGGTTCGATAGAGGCTACCAGATTGTAGACCAGCTCTACTGTAATTTCCTTTCCCCACACGAACATTACACGCACATCCGCACACCCACCCGTATTAATTGTAC 403 6950313 0.958740188 22 396 1912 0.985355649 2.673020907 0.40167364 0.153846154 0.286610879 403 7 0 471 3L:6950218-6950409 8 CG10077 FBtr0076940|FBtr0333083 6949489|6949489 6950329|6950329 AGAGGCTA 8mer-A1 dme-miR-282-5p 3L - 6950242 6950335 stop_codon CG10077 FlyBase G26405.1 AACTAGAGGCCCTGCGGTTCGATAGAGGCTACCAGATTGTAGACCAGCTCTACTGTAATTTCCTTTCCCCACACGAACATTACACGCACATCCG 202 6950313 0.889044747 12 196 983 0.98125 2.195899652 0.384375 0.405940594 0.625 202 5 1 314 3L:6950242-6950335 8 280.5 2350 FBgn0035720 1853.276667 63.62 96.59333333 0.151353549 4.408990883 2.903927117 1 1 1 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 3L 6952578 6952583 - 3L_6952578_6952583_- 0.983398871 0.545461714 0.764430292 0.309668364 CG10077 FBtr0300937 6951802 6953758 3L - 6952571 6952614 3'utr CG10077 FlyBase G34901.1 CATTTGCAACATTTTGCGGCCCAAGTATTTGTTGACTGATGATA 9 6952585 0.634934761 8 9 71 1 1 0 0.111111111 0.2 9 0 0 10 3L:6952571-6952614 6 CG10077 FBtr0300937 6951802 6953758 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 6952544 6952610 3'utr CG10077 FlyBase G26411.1 TGCAACATTTTGCGGCCCAAGTATTTGTTGACTGATGATAATTTTCTGTAGCTTATTTATGTATCAT 7 6952574 0.978764941 6 7 56 1 1 0.2 0.285714286 0.5 7 0 0 10 3L:6952544-6952610 6 3.5 2351 FBgn0035720 1853.276667 63.62 96.59333333 0.001888547 0.055014146 0.036234385 2 -9 -3.5 0.15 dme-miR-31a-5p 6mer3-8 TCTTGC 3L 6952884 6952889 - 3L_6952884_6952889_- 0.587699694 0.992719818 0.790209756 0.286392459 CG10077 FBtr0300937 6951802 6953758 3L - 6952775 6952963 3'utr CG10077 FlyBase G34903.1 AATGAGGGGAATGTGTTTGTTCTCCATGCATTGCTGGTTATATGATGTTGTTACTTTTAGTTCGTTTGTTGCTCTCTTGCTCATAGTTTTTAGTTGTGTCTCGTCAATCACATTTTGAGTAACTTAATTGTAAAAAAGCGATTTACTGTCAGTCAAGGAGTCAATGGCCAGCAAAATAATCTTAAAACA 29 6952886 0.992061641 17 25 293 0.9 1.431363764 0.066666667 0.034482759 0.066666667 29 3 0 27 3L:6952775-6952963 6 CG10077 FBtr0300937 6951802 6953758 TCTTGC 6mer3-8 dme-miR-31a-5p 3L - 6952839 6952926 3'utr CG10077 FlyBase G26412.1 TTATATGATGTTGTTACTTTTAGTTCGTTTGTTGCTCTCTTGCTCATAGTTTTTAGTTGTGTCTCGTCAATCACATTTTGAGTAACTT 11 6952886 0.992110176 8 11 120 1 1.146128036 0.071428571 0.181818182 0.357142857 11 0 0 14 3L:6952839-6952926 6 9 2352 FBgn0035720 1853.276667 63.62 96.59333333 0.004856264 0.141464948 0.093174132 -3 -3 -3 0.15 dme-miR-8-3p 7mer-m8 CAGTATT 3L 6960126 6960132 - 3L_6960126_6960132_- 0.661613041 0.661602571 0.661607806 7.35E-06 sgl FBtr0076938 6959552 6960185 3L - 6959923 6960238 stop_codon sgl FlyBase G34914.2 AGTACCAGCGCACCGGACTGCTCCGCTCGTGGGGCATTGTGCCGCAGCTTTAGGCGCGTCGGGCGGCGGAGGTGGTGGCATTTACACTTAAAGTTGGCGAAATTTCCAGTATTTGCGAGACTAAACTGTAAATATCCGTATTCTTTTCTGTAGCTGAGTGTATGTTAGATTGGGTCGATTAAGCTTAAGTTGAATCATGTTTAGGAGAATAGAATCGTTTCAAATCATCAGAGGACTCTGTCAGTTTTAAGTGAAAAGTAAAGTTGAATTCTTGCATTTTGTATATTAGTTTCTAAAGGATATAAGCTTTTAAAAC 273 6960157 0.987713674 41 257 2333 0.941558442 1.860338007 0.217532468 0.10989011 0.211038961 273 15 3 290 3L:6959923-6960238 7 sgl FBtr0076938 6959552 6960185 CAGTATT 7mer-m8 dme-miR-8-3p 3L - 6960047 6960247 stop_codon sgl FlyBase G26419.1 TCGGCAAGAAGTACCAGCGCACCGGACTGCTCCGCTCGTGGGGCATTGTGCCGCAGCTTTAGGCGCGTCGGGCGGCGGAGGTGGTGGCATTTACACTTAAAGTTGGCGAAATTTCCAGTATTTGCGAGACTAAACTGTAAATATCCGTATTCTTTTCTGTAGCTGAGTGTATGTTAGATTGGGTCGATTAAGCTTAAGTTG 155 6960157 0.986679355 32 146 1262 0.948356808 1.828230115 0.234741784 0.309677419 0.497652582 155 9 2 202 3L:6960047-6960247 7 65 2353 FBgn0261445 3785.826667 203.07 312.6666667 0.017169302 0.32008667 0.207889126 25 25 25 0.15 dme-miR-8-3p 7mer-A1 AGTATTA 3L 6973292 6973298 - 3L_6973292_6973298_- 0.823333259 0.823349562 0.823341411 1.15E-05 Galphai FBtr0076934 6972748 6973342 3L - 6973232 6973460 stop_codon Galphai FlyBase G34930.2 AAAGGAGATATACACGCATCTCACCTGCGCCACGGATACGAACAACGTGAAGTTCGTCTTCGATGCCGTCACCGATGTGATCATCAAGAACAATCTGAAACAAATTGGCTTATTCTGAGAGGGCGGCGGAGCACAAGATCATCATTATTTAGCTGGCGTCGTAGTATTAAAGGAAAACGCGCATAAACATTTCCATTAAACGCTAAGAACTCGATACATTTACGCTCGT 78 6973312 0.878313935 29 70 453 0.909090909 1.602059991 0.147727273 0.128205128 0.227272727 78 7 1 80 3L:6973232-6973460 7 Galphai FBtr0076934 6972748 6973342 AGTATTA 7mer-A1 dme-miR-8-3p 3L - 6973286 6973461 stop_codon Galphai FlyBase G26431.1 AAAAGGAGATATACACGCATCTCACCTGCGCCACGGATACGAACAACGTGAAGTTCGTCTTCGATGCCGTCACCGATGTGATCATCAAGAACAATCTGAAACAAATTGGCTTATTCTGAGAGGGCGGCGGAGCACAAGATCATCATTATTTAGCTGGCGTCGTAGTATTAAAGGAA 48 6973301 0.964731954 19 40 282 0.835616438 1.183269844 0.164383562 0.333333333 0.561643836 48 9 3 61 3L:6973286-6973461 7 16.5 2354 FBgn0001104 5741.72 340.2133333 523.18 0.002873703 0.048498981 0.031537903 14 3 8.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 7123385 7123390 - 3L_7123385_7123390_- 0.730949445 0.730949444 0.730949445 0 msl-3 FBtr0076926|FBtr0076926|FBtr0076926 7123211|7123211|7123211 7123532|7123532|7123532 3L - 7123373 7123404 3'utr msl-3 FlyBase G34937.1 AAAAAGTTTCCTAATGTGATCGTATAATCGAA 10 7123397 0.658593152 5 10 81 1 1.146128036 0.071428571 0.3 0.5 10 0 0 14 3L:7123373-7123404 6 msl-3 FBtr0076926|FBtr0076926|FBtr0076926 7123211|7123211|7123211 7123532|7123532|7123532 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 7123362 7123405 3'utr msl-3 FlyBase G26438.1 AAAAAAGTTTCCTAATGTGATCGTATAATCGAATAATGCCTATA 5 7123395 0.989834517 3 4 43 0.833333333 0.698970004 0 0.2 0.333333333 5 1 0 5 3L:7123362-7123405 6 7.5 2355 FBgn0002775 342.2933333 21.25 32.62333333 0.021911031 0.352941176 0.229896802 7 5 6 0.15 dme-miR-14-3p 6mer3-8 AAGACT 3L 7326478 7326483 - 3L_7326478_7326483_- 0.966501781 0.998925504 0.982713642 0.022927018 CG8602 FBtr0076884 7326271 7326891 3L - 7326464 7326496 3'utr CG8602 FlyBase G34969.1 ACAAAAAACATTCAAGACTTGTGCGCCTAGAGC 11 7326475 0.740006783 4 11 51 1 1.176091259 0 0.363636364 0.533333333 11 0 0 15 3L:7326464-7326496 6 CG8602 FBtr0076884 7326271 7326891 AAGACT 6mer3-8 dme-miR-14-3p 3L - 7326450 7326494 3'utr CG8602 FlyBase G26456.1 AAAAAACATTCAAGACTTGTGCGCCTAGAGCAACGAATTGCTATT 12 7326475 0.953117455 5 12 54 1 1.278753601 0 0.416666667 0.631578947 12 0 0 19 3L:7326450-7326494 6 11 2356 FBgn0035763 925.6666667 44.84666667 68.68666667 0.011883327 0.245280214 0.16014753 -8 -8 -8 0.15 dme-miR-11-3p 7mer-m1 TGTGATG 3L 7326760 7326766 - 3L_7326760_7326766_- 0.581291129 0.399150027 0.490220578 0.128793207 CG8602 FBtr0332734|FBtr0076884 7326523|7326271 7326891|7326891 3L - 7326647 7326865 3'utr CG8602 FlyBase G34970.3 CGCCCGCAGATCGGATTATTATCGGTTATTTAGTGTAGACATAAAAGTTACTCTCTGCGGGCAATGCGCCTTGGTCCGTTCCACGATGTGATGATGATGTGTGATGTGCGTCTCGAGTCGCAAATTGGTATTTACTAACTGCAATTGTTTGTCATCCGACGATAGGGATATACAATACGCCCTGATCAGCCATGAATCAGTATTGATATGCGATTCGAG 202 7326768 0.817454255 39 189 1523 0.944680851 1.568201724 0.442553191 0.133663366 0.255319149 202 8 5 222 3L:7326647-7326865 7 CG8602 FBtr0332734|FBtr0076884 7326523|7326271 7326891|7326891 TGTGATG 7mer-m1 dme-miR-11-3p 3L - 7326660 7326817 3'utr CG8602 FlyBase G26457.3 TACTCTCTGCGGGCAATGCGCCTTGGTCCGTTCCACGATGTGATGATGATGTGTGATGTGCGTCTCGAGTCGCAAATTGGTATTTACTAACTGCAATTGTTTGTCATCCGACGATAGGGATATACAATACGCCCTGATCAGCCATGAATCAGTATTGA 155 7326768 0.910162018 23 141 1185 0.93220339 1.740362689 0.521186441 0.412903226 0.61440678 155 13 3 220 3L:7326660-7326817 7 112.5 2357 FBgn0035763 925.6666667 44.84666667 68.68666667 0.12153403 2.508547644 1.637872464 2 2 2 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 7329872 7329878 + 3L_7329872_7329878_+ 0.642907675 0.652482394 0.647695034 0.006770335 CG42307 FBtr0299691|FBtr0344452|FBtr0299692 7329590|7329590|7329590 7333471|7333471|7333471 3L + 7329847 7329896 3'utr CG42307 FlyBase G28429.1 AAATCAAACCAATACGCACCAGCAATGTGTTCGAAAAACCTGGGCCCAAG 25 7329872 0.833473219 5 24 100 0.962962963 1.414973348 0.074074074 0.08 0.148148148 25 1 0 26 3L:7329847-7329896 7 CG42307 FBtr0299692|FBtr0344452|FBtr0299691 7329590|7329590|7329590 7333471|7333471|7333471 TGTGTTC 7mer-m8 dme-miR-317-3p 3L + 7329847 7329893 3'utr CG42307 FlyBase G21514.1 AAATCAAACCAATACGCACCAGCAATGTGTTCGAAAAACCTGGGCCC 13 7329872 0.904467857 3 12 53 0.933333333 1.146128036 0 0.153846154 0.266666667 13 1 0 14 3L:7329847-7329893 7 19 2358 FBgn0259203 453.5333333 57.31 87.29333333 0.041893282 0.331530274 0.217656942 0 0 0 0.15 dme-miR-252-5p 7mer-m8 GTACTTA 3L 7333319 7333325 + 3L_7333319_7333325_+ 0.55953677 0.588167441 0.573852105 0.020244891 CG42307 FBtr0299691|FBtr0344452|FBtr0299692 7329590|7329590|7329590 7333471|7333471|7333471 3L + 7333296 7333383 3'utr CG42307 FlyBase G28431.1 TCTACAAGTTATGGAATTTCATTGTACTTATACCTAACTTTGAATGCATTGAATTATTTTCTAGTATTTACCTTATATTGTATTATTG 15 7333318 0.809788193 7 13 157 0.875 1.146128036 0.25 0.066666667 0.125 15 2 0 14 3L:7333296-7333383 7 CG42307 FBtr0299692|FBtr0344452|FBtr0299691 7329590|7329590|7329590 7333471|7333471|7333471 GTACTTA 7mer-m8 dme-miR-252-5p 3L + 7333306 7333365 3'utr CG42307 FlyBase G21516.1 ATGGAATTTCATTGTACTTATACCTAACTTTGAATGCATTGAATTATTTTCTAGTATTTA 12 7333318 0.991224745 4 10 108 0.888888889 1.204119983 0.055555556 0.416666667 0.611111111 12 2 0 16 3L:7333306-7333365 7 9 2359 FBgn0259203 453.5333333 57.31 87.29333333 0.019844186 0.157040656 0.103100657 1 1 1 0.15 dme-miR-184-3p 7mer-A1 CCGTCCA 3L 7333767 7333773 - 3L_7333767_7333773_- 0.822328851 0.822403841 0.822366346 5.30E-05 CG43780 FBtr0331507|FBtr0331508 7333542|7333542 7334274|7334274 3L - 7333577 7333929 3'utr CG43780 FlyBase G34984.1 AAGAGCCCACTAACCCGTCTGCACCCACCAACCATATCAGTTTTGCATGCAGTACAAATAGTTTCATTAGCAACCAGTTTTGTTCGAGCCGATTCCATTCCATTAATCGCAATCTGACAATGTGCCTTTCACGTAGAGACTCGTAAGAAATTTATACCGTCCAAGTGTCTTTTCTAGCGCCGTAAGATCGAATTGTATTTTTACATTTAATACCCATTTAGGGTAGTCTGTCTACAGATGCTGCATTTAATGTTGTCCAATATTCTACTCGTATGAAAATATCAGTGTCTTGTATCTACTACAAACTCTATACATTTGTATTCGTCCATTAGTTTTGTAATATTGTATTTTGA 1024 7333775 0.879387613 70 996 7404 0.97492163 2.140577871 0.123040752 0.1875 0.347962382 1024 24 8 1244 3L:7333577-7333929 7 CG43780 FBtr0331508|FBtr0331507 7333542|7333542 7334274|7334274 CCGTCCA 7mer-A1 dme-miR-184-3p 3L - 7333662 7333927 3'utr CG43780 FlyBase G26467.3 GAGCCCACTAACCCGTCTGCACCCACCAACCATATCAGTTTTGCATGCAGTACAAATAGTTTCATTAGCAACCAGTTTTGTTCGAGCCGATTCCATTCCATTAATCGCAATCTGACAATGTGCCTTTCACGTAGAGACTCGTAAGAAATTTATACCGTCCAAGTGTCTTTTCTAGCGCCGTAAGATCGAATTGTATTTTTACATTTAATACCCATTTAGGGTAGTCTGTCTACAGATGCTGCATTTAATGTTGTCCAATATTCTAC 825 7333775 0.876668664 50 799 5386 0.967585089 2.298853076 0.132090762 0.349090909 0.564829822 825 35 5 1194 3L:7333662-7333927 7 589.5 2360 FBgn0264302 77.98333333 6.63 10.06333333 7.559307544 88.91402715 58.57899967 2 2 2 0.15 dme-miR-184-5p 7mer-m8 TGATAAG 3L 7335590 7335596 - 3L_7335590_7335596_- 0.615005692 0.643087306 0.629046499 0.01985669 eco FBtr0076882|FBtr0100278 7335440|7335440 7335670|7335670 3L - 7335557 7335672 stop_codon eco FlyBase G34994.1 GATCGGGGAAATCTATTGAAGCTATTGAATAGCTGGATTGTTTTTGAGTTAGGATTGCTTCGAAACCTGTAATAGTTGATAAGCAAGTGCGATTATGTTACTAGCGGCACGAAGAC 67 7335603 0.977787832 14 61 494 0.906666667 1.230448921 0.28 0.119402985 0.213333333 67 4 3 68 3L:7335557-7335672 7 eco FBtr0076882|FBtr0100278 7335440|7335440 7335670|7335670 TGATAAG 7mer-m8 dme-miR-184-5p 3L - 7335553 7335655 3'utr eco FlyBase G26477.1 GAAGCTATTGAATAGCTGGATTGTTTTTGAGTTAGGATTGCTTCGAAACCTGTAATAGTTGATAAGCAAGTGCGATTATGTTACTAGCGGCACGAAGACGCGC 30 7335602 0.984158829 10 28 218 0.952380952 1.602059991 0.238095238 0.3 0.5 30 2 0 40 3L:7335553-7335655 7 25.5 2361 FBgn0035766 1385.486667 47.26666667 72.42333333 0.018405085 0.539492243 0.35209647 7 6 6.5 0.15 dme-miR-34-5p 6mer2-7 ACTGCC 3L 7341923 7341928 - 3L_7341923_7341928_- 0.886597556 0.769434517 0.828016037 0.082846823 CG8596 FBtr0332733|FBtr0332732|FBtr0076881 7341882|7341882|7341882 7341977|7341977|7341977 3L - 7341902 7341941 3'utr CG8596 FlyBase G35011.1 ACATCGTTGCAATACTGCCCCTTAAACTAGCTTTAAAATA 11 7341928 0.744206599 5 10 71 0.928571429 1.113943352 0.071428571 0.181818182 0.357142857 11 1 0 13 3L:7341902-7341941 6 CG8596 FBtr0332732|FBtr0076881|FBtr0332733 7341882|7341882|7341882 7341977|7341977|7341977 ACTGCC 6mer2-7 dme-miR-34-5p 3L - 7341903 7341945 3'utr CG8596 FlyBase G26489.1 AGACACATCGTTGCAATACTGCCCCTTAAACTAGCTTTAAAAT 9 7341929 0.759191739 6 9 57 1 1.041392685 0 0.222222222 0.363636364 9 0 0 11 3L:7341903-7341945 6 9.5 2362 FBgn0035767 191.44 11.73333333 17.72 0.049623903 0.809659091 0.536117381 0 1 0.5 0.15 dme-miR-304-5p 7mer-m8 TGAGATT 3L 7352547 7352553 + 3L_7352547_7352553_+ 0.620202363 0.620203027 0.620202695 4.24E-07 qm FBtr0332729|FBtr0076846|FBtr0302045 7352392|7352392|7352392 7353622|7353622|7353622 3L + 7352526 7352567 5'utr qm FlyBase G28446.1 CTGCAGAAGCTGAAGATATTCTGAGATTTATGTTACCCTTTG 19 7352544 0.706644077 5 16 162 0.954545455 1.322219295 0.181818182 0.157894737 0.272727273 19 1 0 21 3L:7352526-7352567 7 qm FBtr0076846|FBtr0302045|FBtr0332729 7352392|7352392|7352392 7353622|7353622|7353622 TGAGATT 7mer-m8 dme-miR-304-5p 3L + 7352530 7352562 5'utr qm FlyBase G21526.1 AGAAGCTGAAGATATTCTGAGATTTATGTTACC 9 7352544 0.578140011 6 9 72 1 1.079181246 0 0.333333333 0.5 9 0 0 12 3L:7352530-7352562 7 12.5 2363 FBgn0019662 681.67 36.89 56.62 0.018337319 0.338845216 0.220770046 3 3 3 0.15 dme-miR-968-5p 6mer3-8 ACTACT 3L 7367135 7367140 - 3L_7367135_7367140_- 0.957262058 0.722054334 0.839658196 0.16631703 Sh3beta FBtr0076872|FBtr0302546|FBtr0076873 7366839|7366839|7366839 7367552|7367552|7367552 3L - 7367062 7367145 3'utr Sh3beta FlyBase G35047.1 TTATGACTACTGCGGTTCTTAAGCTAAGTTCATGAGCGTATTTAAACGAGGGCATTCGATTGTGTTGGCCCCCGGTGAAAAGAC 23 7367127 0.707315857 9 23 158 1 1.414973348 0.115384615 0.130434783 0.230769231 23 0 0 26 3L:7367062-7367145 6 Sh3beta FBtr0076873|FBtr0302546|FBtr0076872 7366839|7366839|7366839 7367552|7367552|7367552 ACTACT 6mer3-8 dme-miR-968-5p 3L - 7367091 7367153 3'utr Sh3beta FlyBase G26515.1 CGAATTCATTATGACTACTGCGGTTCTTAAGCTAAGTTCATGAGCGTATTTAAACGAGGGCAT 12 7367127 0.98595592 5 11 88 0.941176471 1.204119983 0.058823529 0.333333333 0.529411765 12 1 0 16 3L:7367091-7367153 6 11.5 2364 FBgn0035772 3075.326667 262.2333333 402.8 0.00373944 0.043854074 0.028550149 -13 -13 -13 0.15 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 7372650 7372655 + 3L_7372650_7372655_+ 0.990405986 0.991229645 0.990817815 0.000582373 akirin FBtr0076849|FBtr0302545|FBtr0076848|FBtr0302543|FBtr0332730|FBtr0302544 7372590|7372590|7372590|7372590|7372590|7372590 7373711|7372783|7372783|7373711|7373711|7373711 3L + 7372615 7372704 3'utr akirin FlyBase G28467.1 CAGAAAGAAGAAATTAATAATTGCACTACGATCTTATGTGACGGTAGATCTACCGCGACAACAACAGCCCTCATAAACTATAACAAACAA 319 7372651 0.824285241 14 305 2285 0.960835509 2.565847819 0.274151436 0.169278997 0.308093995 319 15 0 368 3L:7372615-7372704 6 akirin FBtr0332730|FBtr0302544|FBtr0076848|FBtr0302543|FBtr0076849|FBtr0302545 7372590|7372590|7372590|7372590|7372590|7372590 7373711|7373711|7372783|7373711|7373711|7372783 ATGTGA 6mer3-8 dme-miR-1003-3p 3L + 7372620 7372709 3'utr akirin FlyBase G21547.1 AGAAGAAATTAATAATTGCACTACGATCTTATGTGACGGTAGATCTACCGCGACAACAACAGCCCTCATAAACTATAACAAACAACAAAT 242 7372651 0.960643368 14 229 1656 0.949602122 2.076761772 0.265251989 0.396694215 0.612732095 242 17 2 358 3L:7372620-7372709 6 266 2365 FBgn0082598 6331.316667 435.1366667 666.7366667 0.042013378 0.611302196 0.398958109 -1 -1 -1 0.15 dme-miR-965-3p 7mer-m8 TACGCTT 3L 7373545 7373551 + 3L_7373545_7373551_+ 0.601915743 0.610625677 0.60627071 0.0061589 akirin FBtr0076849|FBtr0302543|FBtr0332730|FBtr0302544 7372590|7372590|7372590|7372590 7373711|7373711|7373711|7373711 3L + 7373517 7373587 3'utr akirin FlyBase G28471.1 AAGTTAAATTGAACGCTTTCTTATAAAATACGCTTGACAGAAGATGTTTCATGTTCATTGCAATTATTTTT 121 7373545 0.984754637 13 115 903 0.958041958 1.835690571 0.244755245 0.157024793 0.286713287 121 5 1 137 3L:7373517-7373587 7 akirin FBtr0332730|FBtr0302544|FBtr0302543|FBtr0076849 7372590|7372590|7372590|7372590 7373711|7373711|7373711|7373711 TACGCTT 7mer-m8 dme-miR-965-3p 3L + 7373500 7373572 3'utr akirin FlyBase G21551.1 TATAAAAGTTATTCATTAAGTTAAATTGAACGCTTTCTTATAAAATACGCTTGACAGAAGATGTTTCATGTTC 70 7373545 0.981879236 9 68 504 0.968421053 1.963787827 0.210526316 0.285714286 0.473684211 70 3 0 92 3L:7373500-7373572 7 78 2366 FBgn0082598 6331.316667 435.1366667 666.7366667 0.012319712 0.179254027 0.116987716 0 0 0 0.15 dme-miR-283-5p 8mer-m1 TGATATTT 3L 7374497 7374504 - 3L_7374497_7374504_- 0.555593836 0.555593833 0.555593834 0 SMSr FBtr0076870 7374048 7374593 3L - 7374434 7374536 3'utr SMSr FlyBase G35059.1 AAAGCAAACATGCAGAAACTAACCATACCGACTGATATTTTTATTTCGAAATTTCCATCGATCCCCTTCCTTTCACAGCTCTCCCCTGTATTATTGACAGCAT 85 7374501 0.74484519 15 78 602 0.923913043 1.452297671 0.141304348 0.070588235 0.141304348 85 5 2 85 3L:7374434-7374536 8 SMSr FBtr0076870 7374048 7374593 TGATATTT 8mer-m1 dme-miR-283-5p 3L - 7374487 7374548 3'utr SMSr FlyBase G26530.2 GTCGCTCTTCGAAAAGCAAACATGCAGAAACTAACCATACCGACTGATATTTTTATTTCGAA 40 7374511 0.976968592 5 36 228 0.964285714 1.73239376 0.071428571 0.375 0.553571429 40 2 0 54 3L:7374487-7374548 8 49.5 2367 FBgn0052380 477.4766667 22.27333333 34.04333333 0.103669987 2.222388506 1.454029178 -3 7 2 0.15 dme-miR-283-5p 8mer-m1 TGATATTT 3L 7432789 7432796 - 3L_7432789_7432796_- 0.555593817 0.555021432 0.555307624 0.000404748 Rac2 FBtr0332800 7432760 7433931 3L - 7432731 7432813 3'utr Rac2 FlyBase G35065.1 GATGTTAATTTATATACTGATATTTATGTTAAATAAATGCATACATTTTGCCAATTTGTTTTAACGAAAGAGAGCGAGCGGTA 18 7432800 0.990313268 12 18 182 1 1.322219295 0.285714286 0.166666667 0.285714286 18 0 0 21 3L:7432731-7432813 8 Rac2 FBtr0332800 7432760 7433931 TGATATTT 8mer-m1 dme-miR-283-5p 3L - 7432770 7432807 3'utr Rac2 FlyBase G26533.1 AATTTATATACTGATATTTATGTTAAATAAATGCATAC 8 7432799 0.947867172 4 8 76 1 1.204119983 0.0625 0.625 0.8125 8 0 0 16 3L:7432770-7432807 8 10.5 2368 FBgn0014011 1633.203333 85.34333333 130.3833333 0.006429083 0.123032457 0.080531765 4 3 3.5 0.15 dme-miR-7-5p 7mer-m8 GTCTTCC 3L 7432877 7432883 - 3L_7432877_7432883_- 0.704974734 0.704340502 0.704657618 0.000448447 Rac2 FBtr0332800 7432760 7433931 3L - 7432867 7432916 3'utr Rac2 FlyBase G35067.1 CGTGTGAATGTGTGTGTGTGTGTCTGATCAATGGTCTTCCCGCTCAACGC 26 7432885 0.844410001 3 23 227 0.9 1.130333768 0.733333333 0.153846154 0.266666667 26 2 1 27 3L:7432867-7432916 7 Rac2 FBtr0332800 7432760 7433931 GTCTTCC 7mer-m8 dme-miR-7-5p 3L - 7432817 7432997 3'utr Rac2 FlyBase G26534.1 TGGCCAATATCTGAACAATCGGGGAATGTGGGAAGCCGACAAAAAAAGAACTTTCATTTATACATATAGTATTTAGAGTTACGTGTGAATGTGTGTGTGTGTGTCTGATCAATGGTCTTCCCGCTCAACGCATTTGCCTGGACTTGATTTAATGTATACTAAATGCACAATTAGCCTCTAC 50 7432885 0.980889737 16 49 348 0.986486486 1.86332286 0.378378378 0.32 0.540540541 50 1 0 73 3L:7432817-7432997 7 21.5 2369 FBgn0014011 1633.203333 85.34333333 130.3833333 0.013164313 0.251923603 0.164898377 2 2 2 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-m8 CTGTGAT 3L 753253 753259 + 3L_753253_753259_+ 0.591001759 0.582281959 0.586641859 0.00616583 emc FBtr0072578|FBtr0072578|FBtr0072578 752306|752306|752306 753492|753492|753492 3L + 753227 753288 3'utr emc FlyBase G26889.1 CCTATAAATATATATTAATATATGTTCTGTGATCTGTAGCATACTTTGTACAAAGTGTTTTT 1016 753260 0.66567851 18 959 10456 0.947533281 1.827512865 0.247454973 0.203740157 0.366483947 1016 50 17 1210 3L:753227-753288 7 emc FBtr0072578|FBtr0072578|FBtr0072578 752306|752306|752306 753492|753492|753492 CTGTGAT 7mer-m8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 753224 753287 3'utr emc FlyBase G20350.1 AAACCTATAAATATATATTAATATATGTTCTGTGATCTGTAGCATACTTTGTACAAAGTGTTTT 771 753261 0.715575089 17 727 7850 0.942783945 1.812520152 0.222886422 0.367055772 0.583262169 771 51 16 1104 3L:753224-753287 7 863 2370 FBgn0000575 1770.966667 105.6933333 162.6966667 0.487304485 8.165131828 5.304349608 -7 -8 -7.5 0.15 dme-miR-2a-2-5p 6mer3-8 TGATGA 3L 753408 753413 + 3L_753408_753413_+ 0.999999495 0.996077255 0.998038375 0.002773414 emc FBtr0072578 752306 753492 3L + 753398 753427 3'utr emc FlyBase G26891.1 AGAAAACATTTGATGATGTTGCGAAAAAAT 6 753411 0.793961073 3 6 38 1 0.954242509 0.333333333 0.333333333 0.555555556 6 0 0 9 3L:753398-753427 6 emc FBtr0072578 752306 753492 TGATGA 6mer3-8 dme-miR-2a-2-5p 3L + 753396 753422 3'utr emc FlyBase G20352.1 AAAGAAAACATTTGATGATGTTGCGAA 5 753413 0.854041908 2 4 24 1 0.84509804 0.142857143 0.4 0.571428571 5 0 0 7 3L:753396-753422 6 5 2371 FBgn0000575 1770.966667 105.6933333 162.6966667 0.002823317 0.047306673 0.030732037 -3 -5 -4 0.15 dme-miR-995-5p 6mer2-7 ATTCGG 3L 7538105 7538110 + 3L_7538105_7538110_+ 0.715820531 0.998539689 0.85718011 0.199912663 lqf FBtr0112941|FBtr0331834|FBtr0076795|FBtr0331836|FBtr0076796|FBtr0331833|FBtr0076798|FBtr0331838|FBtr0076794|FBtr0076797|FBtr0331837|FBtr0331835 7537034|7537034|7537034|7537034|7537034|7536739|7537034|7536739|7537034|7537034|7537034|7536739 7538279|7540012|7538279|7538279|7538279|7538279|7538279|7538279|7538279|7538279|7538279|7538279 3L + 7538044 7538148 3'utr lqf FlyBase G28524.1 TATAAGAGTAACTTAATGATAAACAAAATATACATATATATATATATATAAAAGAAAGCCGATTCGGTGTGAAATTATGCTTAAGAGATTTACATGCCTGACTAG 13 7538106 0.981933574 7 12 87 0.933333333 1.146128036 0.4 0.076923077 0.2 13 1 0 14 3L:7538044-7538148 6 lqf FBtr0076794|FBtr0076797|FBtr0331837|FBtr0331835|FBtr0076798|FBtr0331838|FBtr0076795|FBtr0076796|FBtr0331836|FBtr0112941|FBtr0331834|FBtr0331833 7537034|7537034|7537034|7536739|7537034|7536739|7537034|7537034|7537034|7537034|7537034|7536739 7538279|7538279|7538279|7538279|7538279|7538279|7538279|7538279|7538279|7538279|7540012|7538279 ATTCGG 6mer2-7 dme-miR-995-5p 3L + 7538093 7538137 3'utr lqf FlyBase G21584.1 AAAAGAAAGCCGATTCGGTGTGAAATTATGCTTAAGAGATTTACA 7 7538106 0.969268682 3 7 42 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 3L:7538093-7538137 6 7 2372 FBgn0028582 1900.05 62.33333333 95.30333333 0.003684114 0.112299465 0.073449687 -1 -1 -1 0.15 dme-miR-965-3p 6mer3-8 TACGCT 3L 7777471 7777476 - 3L_7777471_7777476_- 0.998801062 0.997719225 0.998260144 0.000765019 CG32369 FBtr0304992 7777103 7778469 3L - 7777455 7777499 3'utr CG32369 FlyBase G35102.1 ATGAACCTATATATAAAGTGCTATACGCTAAATGCTTATTTCTGT 25 7777476 0.837950856 4 25 169 1 1.491361694 0 0.16 0.322580645 25 0 0 31 3L:7777455-7777499 6 CG32369 FBtr0304992 7777103 7778469 TACGCT 6mer3-8 dme-miR-965-3p 3L - 7777449 7777577 3'utr CG32369 FlyBase G26553.1 CTGAACTATGTCCCTCTCTATAACACCCCTACTCTCTCTTGATTATGCTTAGGCTAACTAAATGATATGCTCACCTATATGAACCTATATATAAAGTGCTATACGCTAAATGCTTATTTCTGTATTCGT 18 7777476 0.982965206 8 17 126 1 1.380211242 0.041666667 0.277777778 0.458333333 18 0 0 24 3L:7777449-7777577 6 17 2373 FBgn0052369 1823.153333 38.16 58.06666667 0.009324504 0.445492662 0.292766935 0 0 0 0.15 dme-miR-92b-3p 7mer-A1 TGCAATA 3L 7777742 7777748 - 3L_7777742_7777748_- 0.773251017 0.782883416 0.778067217 0.006811135 CG32369 FBtr0304992 7777103 7778469 3L - 7777721 7777757 3'utr CG32369 FlyBase G35105.1 AAGACAATCTGCAATATTTTTTTGATATACCTAAACG 6 7777750 0.990802709 3 4 45 0.714285714 0.698970004 0 0.166666667 0.285714286 6 2 0 5 3L:7777721-7777757 7 CG32369 FBtr0304992 7777103 7778469 TGCAATA 7mer-A1 dme-miR-92b-3p 3L - 7777724 7777772 3'utr CG32369 FlyBase G26555.1 AGCGGCTGGAACTCTAAGACAATCTGCAATATTTTTTTGATATACCTAA 5 7777750 0.990979677 3 4 51 0.8 0.602059991 0.2 0 0 5 1 0 4 3L:7777724-7777772 7 5 2374 FBgn0052369 1823.153333 38.16 58.06666667 0.002742501 0.131027254 0.086107922 2 2 2 0.15 dme-bantam-3p 7mer-A1 GATCTCA 3L 7814496 7814502 - 3L_7814496_7814502_- 0.819641398 0.822932441 0.821286919 0.002327088 Pdp1 FBtr0076775|FBtr0076777|FBtr0306535|FBtr0300500|FBtr0346536|FBtr0076776|FBtr0076782|FBtr0332082|FBtr0332081|FBtr0076780|FBtr0332083|FBtr0332080|FBtr0300499 7814335|7814335|7811456|7814335|7811913|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335 7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325 3L - 7814478 7814526 3'utr Pdp1 FlyBase G35131.1 AATATATAATGAAAACCATACATGGATCTCAAGACAGAGTTAAAGAAAT 18 7814504 0.783370631 2 17 74 0.944444444 1.230448921 0 0 0 18 1 0 17 3L:7814478-7814526 7 Pdp1 FBtr0332080|FBtr0076782|FBtr0076780|FBtr0332082|FBtr0332081|FBtr0332083|FBtr0300499|FBtr0076775|FBtr0076777|FBtr0300500|FBtr0306535|FBtr0076776|FBtr0346536 7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7811456|7814335|7811913 7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325 GATCTCA 7mer-A1 dme-bantam-3p 3L - 7814486 7814520 3'utr Pdp1 FlyBase G26585.1 TAATGAAAACCATACATGGATCTCAAGACAGAGTT 17 7814505 0.73199212 3 17 64 1 1.380211242 0.083333333 0.352941176 0.541666667 17 0 0 24 3L:7814486-7814520 7 17.5 2375 FBgn0016694 2143.56 56.17 86.44 0.008163989 0.31155421 0.202452568 2 3 2.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 3L 7814945 7814950 - 3L_7814945_7814950_- 0.974164283 0.982263439 0.978213861 0.005726929 Pdp1 FBtr0076775|FBtr0076777|FBtr0306535|FBtr0300500|FBtr0346536|FBtr0076776|FBtr0076782|FBtr0332082|FBtr0332081|FBtr0076780|FBtr0332083|FBtr0332080|FBtr0300499 7814335|7814335|7811456|7814335|7811913|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335 7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325 3L - 7814927 7814974 3'utr Pdp1 FlyBase G35133.2 TTTGTTATACATTTGAGTTACATTTACCTGCATACAATTATATAGAAA 148 7814952 0.730174722 9 142 1137 0.968085106 1.959041392 0.468085106 0.236486486 0.39893617 148 5 1 182 3L:7814927-7814974 6 Pdp1 FBtr0332080|FBtr0076782|FBtr0076780|FBtr0332082|FBtr0332081|FBtr0332083|FBtr0300499|FBtr0076775|FBtr0076777|FBtr0300500|FBtr0306535|FBtr0076776|FBtr0346536 7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7811456|7814335|7811913 7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 3L - 7814927 7814971 3'utr Pdp1 FlyBase G26587.1 GTTATACATTTGAGTTACATTTACCTGCATACAATTATATAGAAA 101 7814952 0.727914561 4 96 769 0.953947368 1.559308011 0.513157895 0.306930693 0.539473684 101 4 3 145 3L:7814927-7814971 6 123.5 2376 FBgn0016694 2143.56 56.17 86.44 0.057614436 2.198682571 1.428736696 2 2 2 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3L 7815088 7815094 - 3L_7815088_7815094_- 0.52119861 0.52122339 0.521211 1.75E-05 Pdp1 FBtr0076775|FBtr0076777|FBtr0306535|FBtr0300500|FBtr0346536|FBtr0076776|FBtr0076782|FBtr0332082|FBtr0332081|FBtr0076780|FBtr0332083|FBtr0332080|FBtr0300499 7814335|7814335|7811456|7814335|7811913|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335 7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325 3L - 7815066 7815117 3'utr Pdp1 FlyBase G35134.1 CAAGAAAAAACTATTTCTTTTGGTGTGATTTGCAAGATCTTAAACAAACAAT 18 7815088 0.912340412 7 17 176 0.96 1.380211242 0.28 0.222222222 0.44 18 1 0 24 3L:7815066-7815117 7 Pdp1 FBtr0332080|FBtr0076782|FBtr0076780|FBtr0332082|FBtr0332081|FBtr0332083|FBtr0300499|FBtr0076775|FBtr0076777|FBtr0300500|FBtr0306535|FBtr0076776|FBtr0346536 7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7811456|7814335|7811913 7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 7815069 7815114 3'utr Pdp1 FlyBase G26588.1 GAAAAAACTATTTCTTTTGGTGTGATTTGCAAGATCTTAAACAAAC 12 7815088 0.67966725 7 12 110 1 1.204119983 0.3125 0.333333333 0.5 12 0 0 16 3L:7815069-7815114 7 15 2377 FBgn0016694 2143.56 56.17 86.44 0.006997705 0.267046466 0.173530773 -6 -6 -6 0.15 dme-miR-1012-3p 6mer2-7 TGACTA 3L 7896355 7896360 - 3L_7896355_7896360_- 0.976470421 0.99998055 0.988225486 0.016624222 pbl FBtr0076771|FBtr0076774|FBtr0076773|FBtr0112817|FBtr0076772|FBtr0306647 7896107|7896107|7896107|7896107|7896107|7896107 7896723|7896723|7896723|7896723|7896723|7896723 3L - 7896340 7896379 3'utr pbl FlyBase G35157.1 AATCAACTACTCATTGCAGTGACTAGGGATCGAATTCACG 9 7896366 0.727135316 6 9 48 1 1.041392685 0.090909091 0.111111111 0.272727273 9 0 0 11 3L:7896340-7896379 6 pbl FBtr0076772|FBtr0306647|FBtr0076773|FBtr0112817|FBtr0076771|FBtr0076774 7896107|7896107|7896107|7896107|7896107|7896107 7896723|7896723|7896723|7896723|7896723|7896723 TGACTA 6mer2-7 dme-miR-1012-3p 3L - 7896335 7896478 3'utr pbl FlyBase G26602.1 AGCGTTTGCCCGAGCTGTCGATTGATCATGATTAACTTGTAAATAGTTCTCCATATGTGTACTCCCGTGCCCGTATAATTGTGTCGCGTCGCTAAATGTAATCAACTACTCATTGCAGTGACTAGGGATCGAATTCACGCACGC 31 7896366 0.977227081 13 31 210 1 1.681241237 0.25 0.451612903 0.645833333 31 0 0 48 3L:7896335-7896478 6 9 2378 FBgn0003041 731.33 22.66666667 34.57666667 0.012306346 0.397058824 0.26029114 6 6 6 0.15 dme-miR-277-3p 6mer2-7 GCATTT 3L 7913706 7913711 - 3L_7913706_7913711_- 0.968329232 0.95479991 0.961564571 0.00956666 CG8111 FBtr0076770 7913662 7913785 3L - 7913670 7913748 3'utr CG8111 FlyBase G35170.1 ATTTATTGTTGATTTTCATTGTTGAGCCAAATTGATCGCATTTGCCATTTATCCCTCGGCCAATAAAAACTTAACACTT 11 7913717 0.985535566 7 11 86 1 1.113943352 0.153846154 0.090909091 0.230769231 11 0 0 13 3L:7913670-7913748 6 CG8111 FBtr0076770 7913662 7913785 GCATTT 6mer2-7 dme-miR-277-3p 3L - 7913702 7913728 3'utr CG8111 FlyBase G26614.1 GTTGAGCCAAATTGATCGCATTTGCCA 7 7913716 0.937652003 3 6 38 0.916666667 1.041392685 0.666666667 0.428571429 0.666666667 7 1 0 11 3L:7913702-7913728 6 7 2379 FBgn0035825 99.28 9.136666667 13.99333333 0.070507655 0.766143743 0.500238209 6 5 5.5 0.15 dme-miR-980-3p 6mer3-8 GGCAGC 3L 7926341 7926346 - 3L_7926341_7926346_- 0.944147129 0.948030983 0.946089056 0.002746332 syd FBtr0332791|FBtr0300412|FBtr0332790|FBtr0345912|FBtr0332787|FBtr0332788|FBtr0076769|FBtr0332789|FBtr0300413|FBtr0332792 7926023|7926023|7926023|7916648|7926023|7926023|7926023|7926023|7926023|7926023 7926733|7926830|7926830|7926733|7926830|7926733|7926733|7927563|7926733|7927563 3L - 7926331 7926392 3'utr syd FlyBase G35174.1 TATATATATAATAAGATTGAAATTTGTAAATTTTATGCGCTCTCCTGGCAGCAAGTTATGTA 34 7926347 0.911096467 5 32 179 0.909090909 1.602059991 0.454545455 0.264705882 0.431818182 34 4 0 40 3L:7926331-7926392 6 syd FBtr0332788|FBtr0076769|FBtr0300413|FBtr0332792|FBtr0345912|FBtr0332789|FBtr0332787|FBtr0300412|FBtr0332790|FBtr0332791 7926023|7926023|7926023|7926023|7916648|7926023|7926023|7926023|7926023|7926023 7926733|7926733|7926733|7927563|7926733|7927563|7926830|7926830|7926830|7926733 GGCAGC 6mer3-8 dme-miR-980-3p 3L - 7926329 7926365 3'utr syd FlyBase G26619.1 AAATTTTATGCGCTCTCCTGGCAGCAAGTTATGTATT 29 7926347 0.898375437 2 28 144 0.931818182 1.612783857 0.5 0.379310345 0.590909091 29 3 0 41 3L:7926329-7926365 6 28.5 2380 FBgn0024187 713.5033333 16.67666667 25.62333333 0.039943752 1.708974615 1.112267465 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 7972314 7972319 + 3L_7972314_7972319_+ 0.999999814 0.999939183 0.999969499 4.29E-05 RNaseX25 FBtr0076752|FBtr0076752|FBtr0076752 7971844|7971844|7971844 7972449|7972449|7972449 3L + 7972295 7972325 3'utr RNaseX25 FlyBase G28552.1 AAACTCATATATACTATTTCTGTGACGATTA 6 7972311 0.722315116 2 6 61 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 3L:7972295-7972325 6 RNaseX25 FBtr0076752|FBtr0076752|FBtr0076752 7971844|7971844|7971844 7972449|7972449|7972449 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 7972302 7972337 3'utr RNaseX25 FlyBase G21608.1 TATATACTATTTCTGTGACGATTACCTAATTGTTCT 5 7972323 0.855476523 2 4 46 0.833333333 0.698970004 0 0.2 0.333333333 5 1 0 5 3L:7972302-7972337 6 5.5 2381 FBgn0010406 524.1133333 38.16 57.97666667 0.010493914 0.144129979 0.094865751 3 -9 -3 0.15 dme-miR-1008-3p 6mer3-8 AGCTGT 3L 7972378 7972383 + 3L_7972378_7972383_+ 0.920133069 0.972663188 0.946398128 0.03714439 RNaseX25 FBtr0076752 7971844 7972449 3L + 7972378 7972421 3'utr RNaseX25 FlyBase G28553.1 AGCTGTCCAATCATACTGTATCTCTTACTAGTTACTAAGATCAC 39 7972402 0.648500422 7 35 400 0.886363636 1.591064607 0 0.128205128 0.227272727 39 5 0 39 3L:7972378-7972421 5 RNaseX25 FBtr0076752 7971844 7972449 AGCTGT 6mer3-8 dme-miR-1008-3p 3L + 7972381 7972419 3'utr RNaseX25 FlyBase G21609.1 TGTCCAATCATACTGTATCTCTTACTAGTTACTAAGATC 16 7972393 0.725139427 5 13 158 0.842105263 1.204119983 0.052631579 0.1875 0.315789474 16 3 0 16 3L:7972381-7972419 2 2 2382 FBgn0010406 524.1133333 38.16 57.97666667 0.003815969 0.052410901 0.034496637 -24 -15 -19.5 0.15 dme-miR-304-5p 7mer-m8 TGAGATT 3L 7977838 7977844 - 3L_7977838_7977844_- 0.620139388 0.620112336 0.620125862 1.92E-05 CG8038 FBtr0076763 7977803 7977984 3L - 7977805 7977983 3'utr CG8038 FlyBase G35208.1 AACTACAGGACCAATCATTAGCCATAGAAATTGAATCCTATTGTAATTTAAGGAAAAAAGTTTATTGGAAAGTTAGCATCGCTTTTCAATAGAAATTTAATAATTGCCCTCAAAGATCCTCTAAAACTTTACTTGTATTTGAGATTGTTGTGTTTAATATATATATAAAACCGTACATT 34 7977845 0.988159393 21 32 302 0.909090909 1.124938737 0.159090909 0.205882353 0.386363636 34 2 2 40 3L:7977805-7977983 7 CG8038 FBtr0076763 7977803 7977984 TGAGATT 7mer-m8 dme-miR-304-5p 3L - 7977810 7977882 3'utr CG8038 FlyBase G26638.1 AATTGCCCTCAAAGATCCTCTAAAACTTTACTTGTATTTGAGATTGTTGTGTTTAATATATATATAAAACCGT 16 7977846 0.986385513 10 16 142 1 1.414973348 0.153846154 0.5 0.692307692 16 0 0 26 3L:7977810-7977882 7 11.5 2383 FBgn0035831 191 28.52666667 43.6 0.060209424 0.403131573 0.263761468 1 2 1.5 0.15 dme-miR-1008-3p 6mer2-7 GCTGTG 3L 8087780 8087785 - 3L_8087780_8087785_- 0.994172992 0.682574198 0.838373595 0.220333624 CG7565 FBtr0076738 8087633 8087997 3L - 8087650 8087804 3'utr CG7565 FlyBase G35223.1 TATATTATTTTAAGCTGCTGCTGTGCAACAAGTATTATATTTAATGTTTATTTCTACTGCGATACTTTTTATGTGTGTATATAGACATAGCTGTTCACAATCAATGTAACAAACGACATGTAACTGCTTAAAAGTGCATTATTACCCACATTAAA 75 8087787 0.990295055 26 72 728 0.964705882 1.913813852 0.141176471 0.12 0.223529412 75 3 0 82 3L:8087650-8087804 6 CG7565 FBtr0076738 8087633 8087997 GCTGTG 6mer2-7 dme-miR-1008-3p 3L - 8087676 8087803 3'utr CG7565 FlyBase G26650.1 ATATTATTTTAAGCTGCTGCTGTGCAACAAGTATTATATTTAATGTTTATTTCTACTGCGATACTTTTTATGTGTGTATATAGACATAGCTGTTCACAATCAATGTAACAAACGACATGTAACTGCTT 41 8087787 0.904267131 19 39 414 0.947368421 1.73239376 0.140350877 0.341463415 0.526315789 41 3 0 54 3L:8087676-8087803 6 27.5 2384 FBgn0035833 598.6666667 19.29666667 29.46666667 0.045935412 1.4251166 0.933257919 2 2 2 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 8087922 8087928 - 3L_8087922_8087928_- 0.76217932 0.751906359 0.75704284 0.007264037 CG7565 FBtr0076738|FBtr0076738|FBtr0076738 8087633|8087633|8087633 8087997|8087997|8087997 3L - 8087806 8087967 3'utr CG7565 FlyBase G35224.1 AAATATGTGTGTGTGTTAGTCGATCTACTATACCGTGTGTGTGATATCTATTTGTATTTCTATAATGTACTCGGATCTTTTGTACTTTCCGCAAAACTCGTCTGAAGTCAAGTTGTCTATAAGTTCCTTTACGTGCAATTATTTTAAGTTAAGAGTCATTCT 110 8087930 0.808693797 30 105 1077 0.955882353 2.113943352 0.132352941 0.209090909 0.360294118 110 6 0 130 3L:8087806-8087967 7 CG7565 FBtr0076738|FBtr0076738|FBtr0076738 8087633|8087633|8087633 8087997|8087997|8087997 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 8087808 8087944 3'utr CG7565 FlyBase G26651.1 TCTACTATACCGTGTGTGTGATATCTATTTGTATTTCTATAATGTACTCGGATCTTTTGTACTTTCCGCAAAACTCGTCTGAAGTCAAGTTGTCTATAAGTTCCTTTACGTGCAATTATTTTAAGTTAAGAGTCATT 70 8087930 0.923504311 17 66 659 0.962962963 1.716003344 0.037037037 0.428571429 0.62962963 70 3 1 104 3L:8087808-8087944 7 52.5 2385 FBgn0035833 598.6666667 19.29666667 29.46666667 0.087694878 2.720677146 1.781674208 2 2 2 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3L 8105838 8105843 + 3L_8105838_8105843_+ 0.77438482 0.664061794 0.719223307 0.078010141 Ect4 FBtr0304994 8105751 8108836 3L + 8105740 8105878 stop_codon Ect4 FlyBase G28596.1 GGCTCCAGCGTAGAGTGAGCCAAGTTATGCTAACGATTTACAGAGCTAGCCAACTCGAATATGTTCTAGGCTTAAGCAGAGATCCTCAAGTCACACTCTCTAGTACAACTCTCTCTCACTTTCTACCCCCACCCATACA 85 8105840 0.984608114 19 70 557 0.833333333 1.057991947 0.0625 0.105882353 0.208333333 85 10 6 80 3L:8105740-8105878 6 Ect4 FBtr0304994 8105751 8108836 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 8105795 8105870 3'utr Ect4 FlyBase G21642.1 CGAATATGTTCTAGGCTTAAGCAGAGATCCTCAAGTCACACTCTCTAGTACAACTCTCTCTCACTTTCTACCCCCA 36 8105840 0.781684767 10 29 253 0.829787234 0.989004616 0.063829787 0.222222222 0.404255319 36 5 3 39 3L:8105795-8105870 6 40.5 2386 FBgn0262579 2855.543333 63.41666667 97.15666667 0.01418294 0.638633377 0.416852506 -2 -2 -2 0.15 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 8106012 8106018 + 3L_8106012_8106018_+ 0.823071903 0.82295304 0.823012472 8.41E-05 Ect4 FBtr0304994 8105751 8108836 3L + 8105885 8106045 3'utr Ect4 FlyBase G28597.1 ACTTTCTCACTCAACTCAAGCAACCCATTACAACTACACTATCCATTACTCTTTACTCTTACCAATTAATAATTGATTTAATTCTGATTGCCACACACTCGAAATCGCTTGAAACGCCGTCTCATGCGCAGCTAATCACCAGGCAAATAGGTACCGCCAAT 55 8106009 0.913930648 15 52 347 0.951612903 1.469822016 0.080645161 0.109090909 0.209677419 55 2 1 59 3L:8105885-8106045 7 Ect4 FBtr0304994 8105751 8108836 GCAGCTA 7mer-A1 dme-miR-980-3p 3L + 8105885 8106039 3'utr Ect4 FlyBase G21643.1 ACTTTCTCACTCAACTCAAGCAACCCATTACAACTACACTATCCATTACTCTTTACTCTTACCAATTAATAATTGATTTAATTCTGATTGCCACACACTCGAAATCGCTTGAAACGCCGTCTCATGCGCAGCTAATCACCAGGCAAATAGGTACC 34 8106009 0.987127491 16 28 244 0.777777778 1.544068044 0.155555556 0.303030303 0.488888889 33 10 0 35 3L:8105885-8106039 7 15 2387 FBgn0262579 2855.543333 63.41666667 97.15666667 0.005252941 0.23653088 0.154389817 3 3 3 0.15 dme-miR-995-5p 6mer2-7 ATTCGG 3L 8113843 8113848 - 3L_8113843_8113848_- 0.999812334 0.605215249 0.802513791 0.279022285 Arp3 FBtr0076737|FBtr0334087 8113405|8113803 8113955|8113955 3L - 8113816 8113897 3'utr Arp3 FlyBase G35232.1 TGATTTATTGATTTATTCTCCAACTATATATATATATATATACATTGCGATTCGGTATTCCACGCTAAAGTATTAGTAATTA 18 8113848 0.736109722 7 17 182 0.95 1.278753601 0.15 0.111111111 0.2 18 1 0 19 3L:8113816-8113897 6 Arp3 FBtr0076737|FBtr0334087 8113405|8113803 8113955|8113955 ATTCGG 6mer2-7 dme-miR-995-5p 3L - 8113820 8113864 3'utr Arp3 FlyBase G26657.1 ATATATATACATTGCGATTCGGTATTCCACGCTAAAGTATTAGTA 6 8113853 0.995568262 3 4 38 0.777777778 0.84509804 0.222222222 0.5 0.666666667 6 2 0 7 3L:8113820-8113864 6 9 2388 FBgn0262716 1345.763333 82.36666667 125.8 0.006687654 0.109267503 0.07154213 0 5 2.5 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 3L 8123643 8123648 - 3L_8123643_8123648_- 0.999999426 0.999999963 0.999999695 4.24E-07 CG7550 FBtr0076736 8123610 8123736 3L - 8123630 8123668 3'utr CG7550 FlyBase G35244.1 CGTATCAGCCAAGTATCTTCTGTGTTATTTAAATAAAAT 16 8123650 0.65486311 8 14 177 0.875 0.669006781 0.0625 0 0 16 0 2 14 3L:8123630-8123668 6 CG7550 FBtr0076736 8123610 8123736 TGTGTT 6mer3-8 dme-miR-317-3p 3L - 8123630 8123664 3'utr CG7550 FlyBase G26668.1 TCAGCCAAGTATCTTCTGTGTTATTTAAATAAAAT 9 8123650 0.613164019 6 8 89 0.714285714 1 0.285714286 0.333333333 0.571428571 9 4 0 10 3L:8123630-8123664 6 12.5 2389 FBgn0035839 38.33333333 5.32 8.246666667 0.326086957 2.34962406 1.515763945 2 2 2 0.15 dme-miR-92b-3p 7mer-m8 GTGCAAT 3L 8131118 8131124 + 3L_8131118_8131124_+ 0.659000077 0.658995043 0.65899756 3.61E-06 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 3L + 8131095 8131133 3'utr CdsA FlyBase G28656.1 TTTATTTGGCAGAACTCTACACAGTGCAATCGTATTGTT 6 8131112 0.685221027 5 6 38 1 0.77815125 0 0 0 6 0 0 6 3L:8131095-8131133 7 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 GTGCAAT 7mer-m8 dme-miR-92b-3p 3L + 8131096 8131146 3'utr CdsA FlyBase G21697.1 TTATTTGGCAGAACTCTACACAGTGCAATCGTATTGTTAAGCGATTCCATT 8 8131128 0.623481819 7 8 59 1 1.113943352 0.230769231 0.5 0.692307692 8 0 0 13 3L:8131096-8131146 7 6 2390 FBgn0010350 708.1033333 35.43 53.93 0.00847334 0.16934801 0.111255331 6 -10 -2 0.15 dme-miR-1006-3p 7mer-A1 GAATTTA 3L 8131200 8131206 + 3L_8131200_8131206_+ 0.821772168 0.757966507 0.789869338 0.045117443 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 3L + 8131151 8131248 3'utr CdsA FlyBase G28657.1 TTAATGCCCTCGTGACAAGGCGTCAAGGCAAGGCAAACAGAATAACTATGAATTTAATATCGACTATGTGTGTGTGCGTGTTGTTAGTGAATTTAATT 39 8131218 0.956039278 15 36 306 0.913043478 1.62324929 0.195652174 0.153846154 0.282608696 39 4 0 42 3L:8131151-8131248 7 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 GAATTTA 7mer-A1 dme-miR-1006-3p 3L + 8131169 8131279 3'utr CdsA FlyBase G21698.1 GGCGTCAAGGCAAGGCAAACAGAATAACTATGAATTTAATATCGACTATGTGTGTGTGCGTGTTGTTAGTGAATTTAATTACGATAACTATAGCTTAGAGATGATCAGGCA 26 8131218 0.988859788 11 23 210 0.87755102 1.633468456 0.306122449 0.615384615 0.795918367 26 6 0 43 3L:8131169-8131279 7 13.5 2391 FBgn0010350 708.1033333 35.43 53.93 0.019065014 0.381033023 0.250324495 -18 -18 -18 0.15 dme-miR-33-5p 6mer3-8 CAATGC 3L 8131378 8131383 + 3L_8131378_8131383_+ 0.881610641 0.944485184 0.913047912 0.044459056 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 3L + 8131314 8131406 3'utr CdsA FlyBase G28659.1 AGCGCATTTTAGTTAAATACCTGAGGGACGAAATTATGAGATCAAGATACCAGGAAAACTCTTGCAATGCTGTAATTCTATATATAATAGTGC 56 8131381 0.776535826 11 52 343 0.944444444 1.832508913 0.166666667 0.25 0.416666667 56 4 0 68 3L:8131314-8131406 6 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 CAATGC 6mer3-8 dme-miR-33-5p 3L + 8131283 8131409 3'utr CdsA FlyBase G21699.1 AACGCCAGAATCTGGAGATTAGCATAATTAAAGCGCATTTTAGTTAAATACCTGAGGGACGAAATTATGAGATCAAGATACCAGGAAAACTCTTGCAATGCTGTAATTCTATATATAATAGTGCAAT 31 8131381 0.925496026 17 30 216 0.972222222 1.544068044 0.111111111 0.161290323 0.277777778 31 1 0 35 3L:8131283-8131409 6 18.5 2392 FBgn0010350 708.1033333 35.43 53.93 0.02612613 0.522156365 0.343037271 -3 -3 -3 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 3L 8131626 8131632 + 3L_8131626_8131632_+ 0.782911484 0.782118534 0.782515009 0.000560736 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 3L + 8131577 8131652 3'utr CdsA FlyBase G28661.1 GGCATTTAAGAACGAAAATGCAATTCGTCGGCGTTTTAAAGAACTAAATGTACAAAGATTTCAATATTAAATCTTA 16 8131625 0.963480593 7 15 82 0.952380952 1.301029996 0.285714286 0.3125 0.476190476 16 1 0 20 3L:8131577-8131652 7 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 GTACAAA 7mer-A1 dme-miR-305-5p 3L + 8131587 8131640 3'utr CdsA FlyBase G21700.1 AACGAAAATGCAATTCGTCGGCGTTTTAAAGAACTAAATGTACAAAGATTTCAA 25 8131625 0.95399064 6 24 125 0.966666667 1.462397998 0.066666667 0.2 0.333333333 25 1 0 29 3L:8131587-8131640 7 17.5 2393 FBgn0010350 708.1033333 35.43 53.93 0.024713907 0.493931696 0.324494715 1 1 1 0.15 dme-miR-14-3p 6mer2-7 AGACTG 3L 8131653 8131658 - 3L_8131653_8131658_- 0.999999999 1 1 0 CG7504 FBtr0273367|FBtr0273368 8131427|8131427 8131796|8131796 3L - 8131618 8131696 3'utr CG7504 FlyBase G35266.1 AAAAAAGGCTTTGTTATTTTTATATATATTTAACATAGAGACTGTAAGATTTAATATTGAAATCTTTGTACATTTAGTT 29 8131654 0.987865704 10 27 243 0.933333333 1.447158031 0.066666667 0.034482759 0.066666667 29 2 0 28 3L:8131618-8131696 6 CG7504 FBtr0273367|FBtr0273368 8131427|8131427 8131796|8131796 AGACTG 6mer2-7 dme-miR-14-3p 3L - 8131556 8131679 3'utr CG7504 FlyBase G26681.1 TTTTATATATATTTAACATAGAGACTGTAAGATTTAATATTGAAATCTTTGTACATTTAGTTCTTTAAAACGCCGACGAATTGCATTTTCGTTCTTAAATGCCGTACAGTATAACAGGATTTAT 31 8131654 0.98514446 10 27 227 0.888888889 1.602059991 0.111111111 0.290322581 0.511111111 31 5 0 40 3L:8131556-8131679 6 22.5 2394 FBgn0035842 670.3266667 14.32333333 21.90333333 0.033565724 1.570863393 1.027240907 -4 -4 -4 0.15 dme-miR-184-5p 6mer3-8 TGATAA 3L 8170708 8170713 - 3L_8170708_8170713_- 0.997695879 0.999833499 0.998764689 0.001511511 RecQ4 FBtr0076729 8170638 8170818 3L - 8170704 8170731 3'utr RecQ4 FlyBase G35284.1 ATTTTACTCGCACAAGTCTGATAATACA 8 8170709 0.710080714 3 8 39 1 1 0 0.25 0.4 8 0 0 10 3L:8170704-8170731 6 RecQ4 FBtr0076729 8170638 8170818 TGATAA 6mer3-8 dme-miR-184-5p 3L - 8170699 8170727 3'utr RecQ4 FlyBase G26690.1 TACTCGCACAAGTCTGATAATACAAAAAT 5 8170710 0.647048515 2 5 21 1 0.903089987 0 0.4 0.625 5 0 0 8 3L:8170699-8170727 6 6.5 2395 FBgn0040290 522 12.57 19.37666667 0.012452107 0.517104216 0.335455015 -4 -3 -3.5 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 3L 8176224 8176230 - 3L_8176224_8176230_- 0.522290787 0.589059789 0.555675288 0.047212813 Nmt FBtr0076728 8176133 8176425 3L - 8176192 8176277 3'utr Nmt FlyBase G35292.1 GGAAAGCCCTTTGCGAGCATACACCTAAATAGCATCATTGTGAAAATTGCATTTTGCAACGGCCAAGCTTCGATATTTTTTACTAC 25 8176240 0.978805433 12 23 159 0.931034483 1.431363764 0.103448276 0.16 0.275862069 25 2 0 27 3L:8176192-8176277 7 Nmt FBtr0076728 8176133 8176425 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 8176197 8176253 3'utr Nmt FlyBase G26696.1 CTAAATAGCATCATTGTGAAAATTGCATTTTGCAACGGCCAAGCTTCGATATTTTTT 14 8176240 0.972144641 5 12 95 0.952380952 1 0 0.357142857 0.571428571 14 0 1 20 3L:8176197-8176253 7 15 2396 FBgn0020392 364.3333333 24.34666667 37.14333333 0.041171089 0.616100767 0.403840976 10 10 10 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3L 8182762 8182768 + 3L_8182762_8182768_+ 0.633650574 0.555214391 0.594432483 0.055462769 CG7979 FBtr0076690 8182719 8183369 3L + 8182722 8182779 3'utr CG7979 FlyBase G28669.1 ATTAATTGGGCTTAGCTCTAATTGGTGATGATGGAACGTCTCTAGTCTGCAAATGTAA 31 8182769 0.972768601 3 30 211 0.976744186 1.62324929 0.186046512 0.290322581 0.488372093 31 1 0 42 3L:8182722-8182779 7 CG7979 FBtr0076690 8182719 8183369 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 8182714 8182773 stop_codon CG7979 FlyBase G21706.1 ACCGTAGAATTAATTGGGCTTAGCTCTAATTGGTGATGATGGAACGTCTCTAGTCTGCAA 32 8182769 0.972221591 3 32 193 1 1.672097858 0.063829787 0.34375 0.553191489 32 0 0 47 3L:8182714-8182773 7 26.5 2397 FBgn0035848 289.3333333 16.77666667 25.67333333 0.091589862 1.579574806 1.032199429 -7 -7 -7 0.15 dme-miR-33-5p 7mer-m1 AATGCAC 3L 8182913 8182919 + 3L_8182913_8182919_+ 0.829692029 0.708903787 0.769297908 0.085410155 CG7979 FBtr0076690 8182719 8183369 3L + 8182849 8182931 3'utr CG7979 FlyBase G28671.1 TTGAAGTTTTGCGATATATCAGCCTATGTATGGATTAGGAAATAGTGATGTATAAATGCGATCAAATGCACTGAATTCTAGAA 13 8182920 0.978519724 8 13 91 1 1.204119983 0.125 0.153846154 0.3125 13 0 0 16 3L:8182849-8182931 7 CG7979 FBtr0076690 8182719 8183369 AATGCAC 7mer-m1 dme-miR-33-5p 3L + 8182867 8182926 3'utr CG7979 FlyBase G21708.1 TCAGCCTATGTATGGATTAGGAAATAGTGATGTATAAATGCGATCAAATGCACTGAATTC 9 8182920 0.982893126 3 7 55 0.857142857 0.77815125 0.142857143 0.333333333 0.571428571 9 1 1 12 3L:8182867-8182926 7 8 2398 FBgn0035848 289.3333333 16.77666667 25.67333333 0.02764977 0.476852772 0.311607375 -7 -7 -7 0.15 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 8190590 8190595 + 3L_8190590_8190595_+ 0.987573338 0.999993539 0.993783438 0.008782408 Atg18a FBtr0321321|FBtr0076693|FBtr0321320|FBtr0076692|FBtr0076691|FBtr0321319|FBtr0346547 8189976|8189976|8190267|8189976|8189976|8190267|8189976 8190714|8191118|8190965|8190714|8190714|8190714|8190714 3L + 8190568 8190696 3'utr Atg18a FlyBase G28679.1 CGTTCCTGGCGCTGCCATTGGAATGTGAAATGCTTTTGTCATACACTCCTAAGTTAGTTGTTAATTAATAATTTAGACGGATTTACAGATTCGCTTTGATATTTGAGTTGCCAGCTTTTTATACAAAAT 57 8190604 0.83097122 21 56 525 1 1.806179974 0.21875 0.122807018 0.21875 57 0 0 64 3L:8190568-8190696 6 Atg18a FBtr0346547|FBtr0076691|FBtr0321319|FBtr0321320|FBtr0076692|FBtr0321321|FBtr0076693 8189976|8189976|8190267|8190267|8189976|8189976|8189976 8190714|8190714|8190714|8190965|8190714|8190714|8191118 ATGTGA 6mer3-8 dme-miR-1003-3p 3L + 8190558 8190633 3'utr Atg18a FlyBase G21716.1 TTTAAGCCTCCGTTCCTGGCGCTGCCATTGGAATGTGAAATGCTTTTGTCATACACTCCTAAGTTAGTTGTTAATT 35 8190603 0.935417665 10 35 287 1 1.748188027 0.232142857 0.428571429 0.642857143 35 0 0 56 3L:8190558-8190633 6 28 2399 FBgn0035850 441.6666667 25.08666667 38.37666667 0.063396226 1.116130747 0.729610006 -14 -13 -13.5 0.15 dme-miR-283-5p 8mer-m1 TGATATTT 3L 8190664 8190671 + 3L_8190664_8190671_+ 0.553186797 0.550090874 0.551638836 0.002189132 Atg18a FBtr0321321|FBtr0076693|FBtr0321320|FBtr0076692|FBtr0076691|FBtr0321319|FBtr0346547 8189976|8189976|8190267|8189976|8189976|8190267|8189976 8190714|8191118|8190965|8190714|8190714|8190714|8190714 3L + 8190568 8190696 3'utr Atg18a FlyBase G28679.1 CGTTCCTGGCGCTGCCATTGGAATGTGAAATGCTTTTGTCATACACTCCTAAGTTAGTTGTTAATTAATAATTTAGACGGATTTACAGATTCGCTTTGATATTTGAGTTGCCAGCTTTTTATACAAAAT 57 8190658 0.83097122 21 56 525 1 1.806179974 0.21875 0.122807018 0.21875 57 0 0 64 3L:8190568-8190696 8 Atg18a FBtr0346547|FBtr0076691|FBtr0321319|FBtr0321320|FBtr0076692|FBtr0321321|FBtr0076693 8189976|8189976|8190267|8190267|8189976|8189976|8189976 8190714|8190714|8190714|8190965|8190714|8190714|8191118 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 8190634 8190674 3'utr Atg18a FlyBase G21717.1 AATAATTTAGACGGATTTACAGATTCGCTTTGATATTTGAG 24 8190657 0.982836463 5 24 195 1 1.612783857 0.097560976 0.5 0.707317073 24 0 0 41 3L:8190634-8190674 8 23.5 2400 FBgn0035850 441.6666667 25.08666667 38.37666667 0.053207547 0.936752591 0.612351255 6 7 6.5 0.15 dme-miR-968-5p 6mer2-7 CTACTT 3L 8191053 8191058 + 3L_8191053_8191058_+ 0.615925134 0.587926408 0.601925771 0.019798071 Atg18a FBtr0076693 8189976 8191118 3L + 8191030 8191076 3'utr Atg18a FlyBase G28680.1 AGTTTACAAATGAAACTCATACGCTACTTTATTGTATTCAATAAATT 21 8191058 0.728716113 6 21 185 1 1.397940009 0 0.19047619 0.32 21 0 0 25 3L:8191030-8191076 6 Atg18a FBtr0076693 8189976 8191118 CTACTT 6mer2-7 dme-miR-968-5p 3L + 8191030 8191070 3'utr Atg18a FlyBase G21718.1 AGTTTACAAATGAAACTCATACGCTACTTTATTGTATTCAA 15 8191058 0.648308209 5 15 112 1 1.397940009 0.04 0.333333333 0.6 15 0 0 25 3L:8191030-8191070 6 17 2401 FBgn0035850 441.6666667 25.08666667 38.37666667 0.038490566 0.677650811 0.442977504 -5 -5 -5 0.15 dme-miR-34-5p 6mer3-8 CACTGC 3L 8196599 8196604 - 3L_8196599_8196604_- 0.985256417 0.996225356 0.990740887 0.007756254 UbcE2M FBtr0332139|FBtr0076722|FBtr0332138 8195845|8196531|8196531 8196739|8196739|8196739 3L - 8196580 8196648 3'utr UbcE2M FlyBase G35302.1 AACATCGGCGACAACAAATTATTGTAATAAACGAAAACAAAATCCACTGCGTGCAAAGAAGAAGCCGAG 9 8196601 0.820733226 3 9 20 1 1.079181246 0 0.222222222 0.416666667 9 0 0 12 3L:8196580-8196648 6 UbcE2M FBtr0332138|FBtr0332139|FBtr0076722 8196531|8195845|8196531 8196739|8196739|8196739 CACTGC 6mer3-8 dme-miR-34-5p 3L - 8196588 8196630 3'utr UbcE2M FlyBase G26709.1 TTATTGTAATAAACGAAAACAAAATCCACTGCGTGCAAAGAAG 10 8196601 0.768665859 3 9 32 0.9375 1.176091259 0 0.4 0.625 10 1 0 15 3L:8196588-8196630 6 7.5 2402 FBgn0035853 344.1466667 39.61666667 60.33 0.021793034 0.189314262 0.124316261 -3 -3 -3 0.15 dme-miR-34-5p 6mer2-7 ACTGCC 3L 826829 826834 - 3L_826829_826834_- 0.999807975 0.999850457 0.999829216 3.01E-05 CG13900 FBtr0331404|FBtr0072597 826718|826718 830720|827877 3L - 826717 826874 3'utr CG13900 FlyBase G33124.1 ATACTAACTGCACATTAAATCACCGATCAACCACTAATCGACTGCCGCATATTTAAACTAGCATATAAGTCAGTGCAAACTCGACAAATTGCACAACCTAAATATAAACCCCTAATCATAAGCAATTTTTAACTTAAATAAAAGTAACTGAAAACAAA 753 826837 0.772646782 25 721 3085 0.959954233 1.923761961 0.177345538 0.139442231 0.258581236 753 26 9 839 3L:826717-826874 6 CG13900 FBtr0072597|FBtr0331404 826718|826718 827877|830720 ACTGCC 6mer2-7 dme-miR-34-5p 3L - 826751 826872 3'utr CG13900 FlyBase G25063.1 ACTAACTGCACATTAAATCACCGATCAACCACTAATCGACTGCCGCATATTTAAACTAGCATATAAGTCAGTGCAAACTCGACAAATTGCACAACCTAAATATAAACCCCTAATCATAAGCA 388 826838 0.947575908 17 359 1522 0.928455285 1.853546121 0.22601626 0.412371134 0.629268293 388 37 7 571 3L:826751-826872 6 515 2403 FBgn0035162 4015.156667 113.57 173.3966667 0.128263986 4.534648235 2.970068629 3 4 3.5 0.15 dme-miR-307a-3p 6mer2-7 GTTGTG 3L 826976 826981 - 3L_826976_826981_- 0.999999963 0.999925391 0.999962677 5.28E-05 CG13900 FBtr0331404|FBtr0072597 826718|826718 830720|827877 3L - 826950 827003 intron-3'utr CG13900 FlyBase G33125.1 AGATCTTCTTACGTTGGGGTATGTTGTGGCGCTTAATTCTAACTAAATTATACA 12 826979 0.988546395 7 12 114 1 1.113943352 0.230769231 0.083333333 0.153846154 12 0 0 13 3L:826950-827003 6 CG13900 FBtr0072597|FBtr0331404 826718|826718 827877|830720 GTTGTG 6mer2-7 dme-miR-307a-3p 3L - 826954 827003 intron-3'utr CG13900 FlyBase G25064.1 AGATCTTCTTACGTTGGGGTATGTTGTGGCGCTTAATTCTAACTAAATTA 11 826978 0.982079479 7 11 89 1 1.176091259 0.333333333 0.272727273 0.466666667 11 0 0 15 3L:826954-827003 6 11.5 2404 FBgn0035162 4015.156667 113.57 173.3966667 0.002864147 0.101259135 0.066321921 -2 -3 -2.5 0.15 dme-miR-33-5p 7mer-A1 AATGCAA 3L 8282717 8282723 - 3L_8282717_8282723_- 0.751379675 0.782911824 0.767145749 0.022296562 cert FBtr0345035|FBtr0332136|FBtr0076717 8282526|8282526|8282526 8283085|8283085|8283085 3L - 8282654 8282798 3'utr cert FlyBase G35311.1 TGAAACACAATCATTGTATAGATCTTAGTTCCAAAACTTTCTATCTGTAGTGTATATCTTTATGGAAATGCTTTAAATGCAACAATTGCAAGAATGATGTGAGGGATGCATAGCTACATATACGAAAGCTTTTCTTTTGGTGTGA 29 8282730 0.980490007 12 29 211 1 1.531478917 0.117647059 0.172413793 0.294117647 29 0 0 34 3L:8282654-8282798 7 cert FBtr0345035|FBtr0332136|FBtr0076717 8282526|8282526|8282526 8283085|8283085|8283085 AATGCAA 7mer-A1 dme-miR-33-5p 3L - 8282703 8282750 3'utr cert FlyBase G26720.1 AGTGTATATCTTTATGGAAATGCTTTAAATGCAACAATTGCAAGAATG 7 8282722 0.991769521 4 5 56 0.888888889 0.903089987 0.111111111 0.285714286 0.444444444 7 1 0 8 3L:8282703-8282750 7 10 2405 FBgn0027569 860.3466667 42.59 65.35666667 0.011623222 0.234796901 0.153006579 7 -1 3 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 8298258 8298263 + 3L_8298258_8298263_+ 0.999892951 0.999845481 0.999869216 3.36E-05 Rab19 FBtr0076705|FBtr0076705|FBtr0076705|FBtr0331832|FBtr0331832|FBtr0331832 8298223|8298223|8298223|8298223|8298223|8298223 8298506|8298506|8298506|8298506|8298506|8298506 3L + 8298192 8298309 stop_codon Rab19 FlyBase G28696.1 AAGAGTTGCAGCAGCTCATGCAATCTCACCTAGACCTAAATCCGCTCTTTAGTTTGCTTTTACTTTTGTGATCAAATTGTTCTTGTGGCTATATATTAGTATTCTAATGCTTTAACCT 91 8298256 0.960949404 17 82 1009 0.901960784 1.361727836 0.156862745 0.10989011 0.205882353 91 7 3 92 3L:8298192-8298309 6 Rab19 FBtr0331832|FBtr0331832|FBtr0331832|FBtr0076705|FBtr0076705|FBtr0076705 8298223|8298223|8298223|8298223|8298223|8298223 8298506|8298506|8298506|8298506|8298506|8298506 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 8298234 8298301 3'utr Rab19 FlyBase G21730.1 CGCTCTTTAGTTTGCTTTTACTTTTGTGATCAAATTGTTCTTGTGGCTATATATTAGTATTCTAATGC 69 8298256 0.714657309 12 68 762 0.989795918 1.685741739 0.183673469 0.31884058 0.520408163 69 0 1 97 3L:8298234-8298301 6 63.5 2406 FBgn0015793 126.0033333 15.34 23.52333333 0.503954922 4.139504563 2.699447357 2 2 2 0.15 dme-miR-13b-2-5p 8mer-A1 TTTGACGA 3L 8298349 8298356 + 3L_8298349_8298356_+ 0.599326273 0.601206999 0.600266636 0.001329856 Rab19 FBtr0076705|FBtr0331832 8298223|8298223 8298506|8298506 3L + 8298342 8298375 3'utr Rab19 FlyBase G28697.1 ATTTATTTTTGACGATAGAGTACAAACAATCTCA 5 8298356 0.777445187 3 5 28 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 3L:8298342-8298375 8 Rab19 FBtr0331832|FBtr0076705 8298223|8298223 8298506|8298506 TTTGACGA 8mer-A1 dme-miR-13b-2-5p 3L + 8298315 8298379 3'utr Rab19 FlyBase G21731.1 TAGACACTAACTTTTACACAACCATGTATTTATTTTTGACGATAGAGTACAAACAATCTCACACA 7 8298351 0.98568958 6 6 56 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 3L:8298315-8298379 8 5 2407 FBgn0015793 126.0033333 15.34 23.52333333 0.03968149 0.325945241 0.21255491 -7 -2 -4.5 0.15 dme-miR-305-3p 7mer-m1 TGTGCCG 3L 830216 830222 - 3L_830216_830222_- 0.81951919 0.664725266 0.742122228 0.109455816 CG13900 FBtr0331404 826718 830720 3L - 830192 830237 3'utr CG13900 FlyBase G33141.1 ACGCCCACGCTCTGTTGTGCCGCCCTGGGCGATGATGCGCTGGTTC 10 830222 0.836153189 4 10 58 1 1.176091259 0 0.4 0.6 10 0 0 15 3L:830192-830237 7 CG13900 FBtr0331404 826718 830720 TGTGCCG 7mer-m1 dme-miR-305-3p 3L - 830192 830233 3'utr CG13900 FlyBase G25072.1 CCACGCTCTGTTGTGCCGCCCTGGGCGATGATGCGCTGGTTC 5 830212 0.944903561 2 5 28 1 0.954242509 0.555555556 0.4 0.666666667 5 0 0 9 3L:830192-830233 7 7.5 2408 FBgn0035162 4015.156667 113.57 173.3966667 0.001867922 0.066038567 0.043253427 0 -10 -5 0.15 dme-miR-283-5p 8mer-m1 TGATATTT 3L 8302254 8302261 + 3L_8302254_8302261_+ 0.555593015 0.555593594 0.555593304 4.24E-07 CG13671 FBtr0076706 8302211 8302341 3L + 8302238 8302288 3'utr CG13671 FlyBase G28703.1 AGTTAAAAGTTACCGTTGATATTTCCTGTAGATCGTAAGGCTAAAGTTGTC 28 8302254 0.751566411 7 26 251 0.914285714 1.505149978 0.314285714 0.25 0.4 28 3 0 32 3L:8302238-8302288 8 CG13671 FBtr0076706 8302211 8302341 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 8302238 8302286 3'utr CG13671 FlyBase G21734.1 AGTTAAAAGTTACCGTTGATATTTCCTGTAGATCGTAAGGCTAAAGTTG 16 8302258 0.669530582 7 12 124 0.75862069 1.041392685 0.137931034 0.6875 0.827586207 16 6 1 22 3L:8302238-8302286 8 17.5 2409 FBgn0035867 449.54 23.89 36.41666667 0.038928683 0.732524069 0.480549199 0 -4 -2 0.15 dme-bantam-3p 6mer2-7 GATCTC 3L 836596 836601 + 3L_836596_836601_+ 0.513811158 0.545775469 0.529793313 0.022602173 CG42554 FBtr0301253 836552 836770 3L + 836579 836651 3'utr CG42554 FlyBase G26909.1 CTTCAACTAATTTGAAAGATCTCGTGGTAATGCAGTGCCCGCTGAGTGGTGATTAGGATTTAATTTTAGGCAC 45 836603 0.639228599 14 41 322 0.890909091 0.991226076 0.254545455 0.222222222 0.363636364 45 2 4 49 3L:836579-836651 6 CG42554 FBtr0301253 836552 836770 GATCTC 6mer2-7 dme-bantam-3p 3L + 836572 836644 3'utr CG42554 FlyBase G20367.1 TGTAAAACTTCAACTAATTTGAAAGATCTCGTGGTAATGCAGTGCCCGCTGAGTGGTGATTAGGATTTAATTT 34 836603 0.856427737 13 33 242 0.980392157 1.698970004 0.156862745 0.382352941 0.588235294 34 1 0 50 3L:836572-836644 6 27 2410 FBgn0260756 37.16 4.52 6.893333333 0.726587729 5.973451327 3.916827853 -7 -7 -7 0.15 dme-miR-14-3p 6mer3-8 AAGACT 3L 839469 839474 + 3L_839469_839474_+ 0.728051518 0.721763195 0.724907356 0.0044465 CG13887 FBtr0304797|FBtr0072584|FBtr0345588|FBtr0072583 839152|839431|839431|839431 839747|839747|839931|839747 3L + 839446 839513 3'utr CG13887 FlyBase G26916.1 AAGTCCAACATTTAAATAACGATAAGACTTATAAGCATGGCGGTGGGGCAGCGAAAGCAGGCACATTT 389 839482 0.809432961 8 330 1595 0.844444444 2.102662342 0.433333333 0.143958869 0.26 389 68 2 380 3L:839446-839513 6 CG13887 FBtr0072583|FBtr0345588|FBtr0072584|FBtr0304797 839431|839431|839431|839152 839747|839931|839747|839747 AAGACT 6mer3-8 dme-miR-14-3p 3L + 839369 839515 stop_codon CG13887 FlyBase G20372.1 CGAGGAGTACAGCAAGCTGCAGAAGAAGATAACCATCGGCGGAGGCGGAAACAAGGATGATTAAACTCACTGGAGCCAAGTCCAACATTTAAATAACGATAAGACTTATAAGCATGGCGGTGGGGCAGCGAAAGCAGGCACATTTAA 320 839482 0.965389827 15 235 1239 0.738947368 2.068185862 0.412631579 0.35625 0.566315789 320 122 2 351 3L:839369-839515 6 267 2411 FBgn0035165 3558.06 375.0733333 574.87 0.075040893 0.711860792 0.464452833 -13 -13 -13 0.15 dme-bantam-3p 7mer-m8 TGATCTC 3L 840010 840016 - 3L_840010_840016_- 0.661597678 0.661602087 0.661599882 3.11E-06 CG13902 FBtr0331402|FBtr0300712 839978|839978 840057|840057 3L - 839995 840028 3'utr CG13902 FlyBase G33156.1 ATTTATGTAGGATGATCTCTGTTCAAGTTAAGAT 13 840016 0.746872939 3 13 104 1 1.176091259 0.066666667 0.153846154 0.266666667 13 0 0 15 3L:839995-840028 7 CG13902 FBtr0300712|FBtr0331402 839978|839978 840057|840057 TGATCTC 7mer-m8 dme-bantam-3p 3L - 839990 840024 3'utr CG13902 FlyBase G25084.1 ATGTAGGATGATCTCTGTTCAAGTTAAGATTAAAG 6 840016 0.981906274 3 6 41 1 1 0 0.333333333 0.6 6 0 0 10 3L:839990-840024 7 9 2412 FBgn0035166 125.3433333 11.64666667 17.69 0.071802782 0.772753291 0.508762012 0 0 0 0.15 dme-miR-184-3p 8mer-A1 TCCGTCCA 3L 8407329 8407336 - 3L_8407329_8407336_- 0.631128331 0.631129623 0.631128977 9.19E-07 Oseg1 FBtr0345038|FBtr0076663 8407266|8407266 8407370|8407370 3L - 8407307 8407360 3'utr Oseg1 FlyBase G35375.1 AGAAGTGTGTGCAAATATATAATTTCCGTCCAAAACTGTACAAATAGGAACTAT 123 8407337 0.721228656 3 123 872 1 2.167317335 0.040816327 0.146341463 0.285714286 123 0 0 147 3L:8407307-8407360 8 Oseg1 FBtr0076663|FBtr0345038 8407266|8407266 8407370|8407370 TCCGTCCA 8mer-A1 dme-miR-184-3p 3L - 8407305 8407358 3'utr Oseg1 FlyBase G26767.1 AAGTGTGTGCAAATATATAATTTCCGTCCAAAACTGTACAAATAGGAACTATAC 99 8407337 0.701736893 5 96 665 0.964788732 2.136720567 0.070422535 0.333333333 0.535211268 99 5 0 137 3L:8407305-8407358 8 111 2413 FBgn0265102 118.8066667 3.826666667 5.82 0.934291005 29.00696864 19.07216495 1 1 1 0.15 dme-miR-970-3p 8mer-A1 TCTTATGA 3L 8427483 8427490 + 3L_8427483_8427490_+ 0.630157857 0.630413795 0.630285826 0.000180949 Cbl FBtr0076614 8427408 8428655 3L + 8427401 8427581 lincRNA_exon-lincRNA_intron Cbl FlyBase G28745.1 GAGGTATAGTTTTGTTCACAGCCTGATCAGCCTGATCCGCCTGCTCCGCTGCCGCCTGTGCTGCTATTTATATACATATTACTCTTATGATTACCTTTGGTTCGTTTATACAGTTATATATGCCTATATATACATTATATATTTTAGATTTTACAACTGCTATTGTTTATATAAGTTTAAT 61 8427491 0.987756108 26 59 536 0.971014493 1.348953548 0.15942029 0.098360656 0.202898551 61 0 2 67 3L:8427401-8427581 8 Cbl FBtr0076614 8427408 8428655 TCTTATGA 8mer-A1 dme-miR-970-3p 3L + 8427406 8427504 stop_codon Cbl FlyBase G21771.1 ATAGTTTTGTTCACAGCCTGATCAGCCTGATCCGCCTGCTCCGCTGCCGCCTGTGCTGCTATTTATATACATATTACTCTTATGATTACCTTTGGTTCG 35 8427497 0.989904453 16 31 305 0.884615385 1.185636577 0.096153846 0.342857143 0.557692308 35 4 2 46 3L:8427406-8427504 8 21.5 2414 FBgn0020224 1487.473333 60.45 92.97666667 0.014454041 0.35566584 0.231240813 -8 -14 -11 0.15 dme-miR-1006-3p 7mer-A1 GAATTTA 3L 8427989 8427995 + 3L_8427989_8427995_+ 0.699825489 0.699648675 0.699737082 0.000125016 Cbl FBtr0076614 8427408 8428655 3L + 8427971 8428044 3'utr Cbl FlyBase G28747.1 TTGTACATAGGCACTATGGAATTTATAATTGTAACCTGTTCTGTATTATTCGTTGAATTTTCTCTTTCACATCC 9 8427987 0.984746636 5 7 76 0.888888889 0.903089987 0.222222222 0 0 9 1 0 8 3L:8427971-8428044 7 Cbl FBtr0076614 8427408 8428655 GAATTTA 7mer-A1 dme-miR-1006-3p 3L + 8427976 8428023 3'utr Cbl FlyBase G21772.1 CATAGGCACTATGGAATTTATAATTGTAACCTGTTCTGTATTATTCGT 7 8427987 0.87987295 4 7 67 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 3L:8427976-8428023 7 4 2415 FBgn0020224 1487.473333 60.45 92.97666667 0.002689124 0.066170389 0.043021547 2 2 2 0.15 dme-miR-14-3p 7mer-m8 AAGACTG 3L 8428258 8428264 + 3L_8428258_8428264_+ 0.671795823 0.671795831 0.671795827 0 Cbl FBtr0076614 8427408 8428655 3L + 8428231 8428285 3'utr Cbl FlyBase G28749.1 ATTTGTAAGCAGCCAACGCGCTGCCCTAAGACTGTAATTTATTATTAACAAAAAA 68 8428257 0.800300049 9 55 480 0.805194805 0.83814918 0 0.132352941 0.233766234 68 7 8 62 3L:8428231-8428285 7 Cbl FBtr0076614 8427408 8428655 AAGACTG 7mer-m8 dme-miR-14-3p 3L + 8428234 8428287 3'utr Cbl FlyBase G21774.1 TGTAAGCAGCCAACGCGCTGCCCTAAGACTGTAATTTATTATTAACAAAAAAAA 48 8428257 0.76662485 10 40 309 0.824324324 1.183269844 0 0.333333333 0.567567568 48 10 3 61 3L:8428234-8428287 7 56 2416 FBgn0020224 1487.473333 60.45 92.97666667 0.037647734 0.926385443 0.602301653 1 1 1 0.15 dme-miR-184-5p 6mer3-8 TGATAA 3L 8432784 8432789 - 3L_8432784_8432789_- 0.989931313 0.9812896 0.985610457 0.006110605 Unr FBtr0345595|FBtr0308954 8432320|8432320 8434468|8434468 3L - 8432748 8432803 3'utr Unr FlyBase G35382.1 CGAGGTTGATGGAATGATAATGGGATAATCGACAGACATGCCAAACGCCATCGCCT 7 8432797 0.959774829 5 7 32 1 1 0.2 0.285714286 0.5 7 0 0 10 3L:8432748-8432803 6 Unr FBtr0308954|FBtr0345595 8432320|8432320 8434468|8434468 TGATAA 6mer3-8 dme-miR-184-5p 3L - 8432778 8432811 3'utr Unr FlyBase G26772.1 GGGCAAATCGAGGTTGATGGAATGATAATGGGAT 11 8432797 0.634387209 5 9 56 0.928571429 1.113943352 0.214285714 0.272727273 0.428571429 11 1 0 13 3L:8432778-8432811 6 8 2417 FBgn0263352 12905.48667 184.7766667 285.27 0.000619891 0.04329551 0.028043608 8 8 8 0.15 dme-bantam-3p 6mer3-8 TGATCT 3L 8433535 8433540 - 3L_8433535_8433540_- 0.999983267 0.999980191 0.999981729 2.19E-06 Unr FBtr0345595|FBtr0308954|FBtr0332984|FBtr0114592 8432320|8432320|8433230|8433230 8434468|8434468|8434468|8434468 3L - 8433517 8433554 3'utr Unr FlyBase G35387.1 TATTTCCCATGATTTGATCTTCGCTTGTATAAACACGT 30 8433540 0.688667363 6 26 290 0.897435897 1.243038049 0.128205128 0.2 0.384615385 30 3 1 35 3L:8433517-8433554 6 Unr FBtr0114592|FBtr0308954|FBtr0332984|FBtr0345595 8433230|8432320|8433230|8432320 8434468|8434468|8434468|8434468 TGATCT 6mer3-8 dme-bantam-3p 3L - 8433505 8433556 3'utr Unr FlyBase G26776.1 ATTATTTCCCATGATTTGATCTTCGCTTGTATAAACACGTCAAGTGGTTTTG 20 8433541 0.783196371 11 20 206 1 1.491361694 0.096774194 0.4 0.612903226 20 0 0 31 3L:8433505-8433556 6 23 2418 FBgn0263352 12905.48667 184.7766667 285.27 0.001782188 0.124474591 0.080625372 0 1 0.5 0.15 dme-bantam-3p 6mer3-8 TGATCT 3L 8433800 8433805 - 3L_8433800_8433805_- 0.893109144 0.999998878 0.946554011 0.075582502 Unr FBtr0345595|FBtr0308954|FBtr0332984|FBtr0114592 8432320|8432320|8433230|8433230 8434468|8434468|8434468|8434468 3L - 8433791 8433846 3'utr Unr FlyBase G35389.1 ATTTATCTATGGCTGGCATAGTTCCTGCTTCTATTGTATCTTGATCTACTCGTATT 8 8433827 0.74579482 7 7 91 0.9 0.653212514 0.3 0.25 0.4 8 0 1 9 3L:8433791-8433846 6 Unr FBtr0114592|FBtr0308954|FBtr0332984|FBtr0345595 8433230|8432320|8433230|8432320 8434468|8434468|8434468|8434468 TGATCT 6mer3-8 dme-bantam-3p 3L - 8433791 8433834 3'utr Unr FlyBase G26779.1 CTGGCATAGTTCCTGCTTCTATTGTATCTTGATCTACTCGTATT 7 8433806 0.913247696 3 4 70 0.75 0.77815125 0.25 0.142857143 0.25 7 2 0 6 3L:8433791-8433834 6 5 2419 FBgn0263352 12905.48667 184.7766667 285.27 0.000387432 0.027059694 0.017527255 22 1 11.5 0.15 dme-miR-184-5p 6mer2-7 GATAAG 3L 8433968 8433973 - 3L_8433968_8433973_- 0.997994298 0.996230395 0.997112346 0.001247266 Unr FBtr0345595|FBtr0308954|FBtr0332984|FBtr0114592 8432320|8432320|8433230|8433230 8434468|8434468|8434468|8434468 3L - 8433956 8433985 3'utr Unr FlyBase G35391.1 AAAACCGATTGGGATAAGTGATGAGAGCAA 8 8433977 0.851583007 2 4 29 0.666666667 0.77815125 0.111111111 0.125 0.222222222 8 3 0 6 3L:8433956-8433985 6 Unr FBtr0114592|FBtr0308954|FBtr0332984|FBtr0345595 8433230|8432320|8433230|8432320 8434468|8434468|8434468|8434468 GATAAG 6mer2-7 dme-miR-184-5p 3L - 8433944 8433990 3'utr Unr FlyBase G26781.1 AATTAAAAACCGATTGGGATAAGTGATGAGAGCAAGGAAACGAGCAA 12 8433977 0.95559408 3 10 42 0.833333333 0.875061263 0 0.5 0.666666667 12 2 1 15 3L:8433944-8433990 6 9.5 2420 FBgn0263352 12905.48667 184.7766667 285.27 0.000736121 0.051413418 0.033301784 4 4 4 0.15 dme-miR-317-3p 8mer-A1 TGTGTTCA 3L 8470858 8470865 + 3L_8470858_8470865_+ 0.616300312 0.628887848 0.62259408 0.008900707 Gug FBtr0305699|FBtr0076618|FBtr0305696|FBtr0305697|FBtr0305698|FBtr0076616|FBtr0333048|FBtr0076619 8470769|8470769|8470769|8470769|8470769|8470769|8470769|8470769 8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669 3L + 8470756 8470887 stop_codon Gug FlyBase G28769.1 CAACGGCCCAGATAAGTGGACAGACAGCAATTGTAGAGAGCAAGCAACTGAACAAAGACAATACTCGGGCCGCGGCCGTGAGGAACTGCTTTGTGTGATTTTTGTGTTCAAGCGTTTACATTTTGTTTTCCA 92 8470857 0.974565337 18 86 533 0.930434783 2.029383778 0.32173913 0.195652174 0.356521739 92 8 0 107 3L:8470756-8470887 8 Gug FBtr0076619|FBtr0076616|FBtr0333048|FBtr0305697|FBtr0305698|FBtr0305699|FBtr0076618|FBtr0305696 8470769|8470769|8470769|8470769|8470769|8470769|8470769|8470769 8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669 TGTGTTCA 8mer-A1 dme-miR-317-3p 3L + 8470784 8470875 3'utr Gug FlyBase G21793.1 AATTGTAGAGAGCAAGCAACTGAACAAAGACAATACTCGGGCCGCGGCCGTGAGGAACTGCTTTGTGTGATTTTTGTGTTCAAGCGTTTACA 45 8470857 0.962856331 9 40 254 0.873239437 1.792391689 0.169014085 0.444444444 0.647887324 45 9 0 62 3L:8470784-8470875 8 28 2421 FBgn0010825 1916.706667 26.53 40.64 0.014608391 1.055408971 0.688976378 1 1 1 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 3L 8471665 8471671 + 3L_8471665_8471671_+ 0.758304848 0.767642736 0.762973792 0.006602892 Gug FBtr0305699|FBtr0076618|FBtr0305696|FBtr0305697|FBtr0305698|FBtr0076616|FBtr0333048|FBtr0333049|FBtr0076619 8470769|8470769|8470769|8470769|8470769|8470769|8470769|8471166|8470769 8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669 3L + 8471642 8471690 3'utr Gug FlyBase G28772.1 TCATATATATATTCGAGAGTATTGTACAAATGGATTCGGAGATAGTTTT 48 8471663 0.720444816 8 45 337 0.943396226 1.698970004 0.301886792 0.083333333 0.169811321 48 3 0 50 3L:8471642-8471690 7 Gug FBtr0333049|FBtr0076619|FBtr0076616|FBtr0333048|FBtr0305697|FBtr0305698|FBtr0305699|FBtr0076618|FBtr0305696 8471166|8470769|8470769|8470769|8470769|8470769|8470769|8470769|8470769 8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669 GTACAAA 7mer-A1 dme-miR-305-5p 3L + 8471644 8471691 3'utr Gug FlyBase G21796.1 ATATATATATTCGAGAGTATTGTACAAATGGATTCGGAGATAGTTTTC 31 8471663 0.693939081 6 30 191 0.97826087 1.653212514 0.239130435 0.387096774 0.586956522 31 1 0 45 3L:8471644-8471691 7 38.5 2422 FBgn0010825 1916.706667 26.53 40.64 0.020086537 1.451187335 0.94734252 2 2 2 0.15 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 8472551 8472557 + 3L_8472551_8472557_+ 0.597810913 0.653107574 0.625459244 0.039100672 Gug FBtr0305699|FBtr0076618|FBtr0305696|FBtr0305697|FBtr0305698|FBtr0076616|FBtr0333048|FBtr0333049|FBtr0076619 8470769|8470769|8470769|8470769|8470769|8470769|8470769|8471166|8470769 8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669 3L + 8472514 8472603 3'utr Gug FlyBase G28780.1 ATACAAAAAAAAACAAAACAAATGCAGCTATATTATTGCAGCTATATTACTAAATAAATTATAAAACAAAAAGATCATACTGAAAAGATA 154 8472549 0.983698849 13 143 1111 0.935483871 2.240549248 0.02688172 0.142857143 0.290322581 154 12 0 174 3L:8472514-8472603 7 Gug FBtr0333049|FBtr0076619|FBtr0076616|FBtr0333048|FBtr0305697|FBtr0305698|FBtr0305699|FBtr0076618|FBtr0305696 8471166|8470769|8470769|8470769|8470769|8470769|8470769|8470769|8470769 8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669 GCAGCTA 7mer-A1 dme-miR-980-3p 3L + 8472502 8472606 3'utr Gug FlyBase G21800.1 ATTTATATATATATACAAAAAAAAACAAAACAAATGCAGCTATATTATTGCAGCTATATTACTAAATAAATTATAAAACAAAAAGATCATACTGAAAAGATAAAT 98 8472549 0.981530708 10 93 680 0.960264901 1.860338007 0.046357616 0.387755102 0.602649007 98 5 1 145 3L:8472502-8472606 7 76 2423 FBgn0010825 1916.706667 26.53 40.64 0.039651346 2.864681493 1.87007874 2 2 2 0.15 dme-bantam-3p 6mer3-8 TGATCT 3L 8533492 8533497 + 3L_8533492_8533497_+ 0.551555837 0.742312743 0.64693429 0.134885498 foi FBtr0331417|FBtr0345601|FBtr0331418|FBtr0076624 8533104|8533104|8533104|8533104 8533984|8534503|8533984|8533984 3L + 8533470 8533636 3'utr foi FlyBase G28803.1 TGAAATTGGCTAGGTTATAAAGTGATCTTGAATTTAGATGAAAACATTTGAAAAGCATGCCGTGATGCTGTCAAATGAGAAAAGGAAGTAACAAAAAATGGATTGGATCTGGATCCCACAATCCTCTAATTACTGATCTTATACACGAAAGAGAACCTAAAAATTAC 122 8533496 0.978077291 20 120 989 0.972222222 2.146128036 0.25 0.147540984 0.277777778 122 4 0 140 3L:8533470-8533636 6 foi FBtr0331418|FBtr0076624|FBtr0331417|FBtr0345601 8533104|8533104|8533104|8533104 8533984|8533984|8533984|8534503 TGATCT 6mer3-8 dme-bantam-3p 3L + 8533422 8533545 3'utr foi FlyBase G21817.1 TGAACTGCGTTCGAATCCATTTCACACCCAATTTAATGTAAGATGTCTTGAAATTGGCTAGGTTATAAAGTGATCTTGAATTTAGATGAAAACATTTGAAAAGCATGCCGTGATGCTGTCAAAT 75 8533494 0.987547831 15 71 641 0.939655172 2.037426498 0.172413793 0.413333333 0.620689655 75 7 0 109 3L:8533422-8533545 6 74 2424 FBgn0024236 2703.683333 97.23 149.9066667 0.027370069 0.761081971 0.493640487 -4 -2 -3 0.15 dme-miR-190-5p 6mer3-8 ACATAT 3L 8533685 8533690 + 3L_8533685_8533690_+ 0.512134102 0.993818706 0.752976404 0.340602447 foi FBtr0331417|FBtr0345601|FBtr0331418|FBtr0076624 8533104|8533104|8533104|8533104 8533984|8534503|8533984|8533984 3L + 8533649 8533722 3'utr foi FlyBase G28804.1 ATAAATATACATATATATTGTAGGATATGTATACATACATATACTTTTTGTATTTTGTAGTCTAGAGTGCGCAC 11 8533712 0.988486727 8 11 105 1 1.041392685 0.272727273 0 0 11 0 0 11 3L:8533649-8533722 6 foi FBtr0331418|FBtr0076624|FBtr0331417|FBtr0345601 8533104|8533104|8533104|8533104 8533984|8533984|8533984|8534503 ACATAT 6mer3-8 dme-miR-190-5p 3L + 8533683 8533739 3'utr foi FlyBase G21819.1 ATACATATACTTTTTGTATTTTGTAGTCTAGAGTGCGCACGTTTACTTTATGCGAGT 14 8533703 0.991923041 6 12 138 0.909090909 1.301029996 0.363636364 0.357142857 0.590909091 14 2 0 20 3L:8533683-8533739 6 2 2425 FBgn0024236 2703.683333 97.23 149.9066667 0.000739732 0.020569783 0.013341635 -27 -18 -22.5 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 8533795 8533802 + 3L_8533795_8533802_+ 0.500120317 0.498296101 0.499208209 0.001289904 foi FBtr0331417|FBtr0345601|FBtr0331418|FBtr0076624 8533104|8533104|8533104|8533104 8533984|8534503|8533984|8533984 3L + 8533768 8533847 3'utr foi FlyBase G28805.1 TGTCCACCGCTGTTATGATTTTCTACAGTACTTAACGACTTGAACGCATATTTCCTCTTTCGGGAAATGTACACAAAACC 18 8533799 0.978441286 9 15 107 0.869565217 1.301029996 0.347826087 0.277777778 0.434782609 18 3 0 20 3L:8533768-8533847 8 foi FBtr0331418|FBtr0076624|FBtr0331417|FBtr0345601 8533104|8533104|8533104|8533104 8533984|8533984|8533984|8534503 GTACTTAA 8mer-A1 dme-miR-252-5p 3L + 8533772 8533836 3'utr foi FlyBase G21820.1 CACCGCTGTTATGATTTTCTACAGTACTTAACGACTTGAACGCATATTTCCTCTTTCGGGAAATG 15 8533799 0.975530423 6 15 96 1 1.342422681 0.272727273 0.333333333 0.545454545 15 0 0 22 3L:8533772-8533836 8 12.5 2426 FBgn0024236 2703.683333 97.23 149.9066667 0.004623323 0.128561144 0.083385217 -4 -4 -4 0.15 dme-miR-14-3p 6mer3-8 AAGACT 3L 8537247 8537252 + 3L_8537247_8537252_+ 0.99909704 0.997821242 0.998459141 0.000902127 ergic53 FBtr0301629|FBtr0076626 8537117|8537117 8537581|8538013 3L + 8537194 8537274 3'utr ergic53 FlyBase G28812.1 AGATTCGCACACCTGACTAGGCAGCAACTAAATTTAGTTAAAATGAAAGATTTAAGACTTCAGCGTAGCATGCTCTACCAT 278 8537245 0.823812781 14 260 1773 0.938271605 2.181843588 0.330246914 0.143884892 0.265432099 278 19 1 304 3L:8537194-8537274 6 ergic53 FBtr0076626|FBtr0301629 8537117|8537117 8538013|8537581 AAGACT 6mer3-8 dme-miR-14-3p 3L + 8537184 8537275 3'utr ergic53 FlyBase G21826.1 ACGAGGAAACAGATTCGCACACCTGACTAGGCAGCAACTAAATTTAGTTAAAATGAAAGATTTAAGACTTCAGCGTAGCATGCTCTACCATT 131 8537245 0.980179067 12 118 829 0.900990099 1.481920138 0.262376238 0.381679389 0.599009901 131 15 5 182 3L:8537184-8537275 6 194 2427 FBgn0035909 3502.546667 181.83 278.43 0.05538827 1.06693065 0.696763998 2 2 2 0.15 dme-bantam-3p 7mer-m8 TGATCTC 3L 8564459 8564465 + 3L_8564459_8564465_+ 0.661175352 0.661316216 0.661245784 9.96E-05 rhea FBtr0333109 8564005 8574409 3L + 8564441 8564486 3'utr rhea FlyBase G28835.1 TTTGTGCAGTGCCTTCAGTGATCTCCTCAAGGCAGCCGAGCCAGAA 53 8564459 0.977387238 5 50 331 0.942028986 1.335792102 0.057971014 0.283018868 0.449275362 53 2 2 65 3L:8564441-8564486 7 rhea FBtr0333109 8564005 8574409 TGATCTC 7mer-m8 dme-bantam-3p 3L + 8564443 8564485 3'utr rhea FlyBase G21840.1 TGTGCAGTGCCTTCAGTGATCTCCTCAAGGCAGCCGAGCCAGA 30 8564459 0.973834817 5 30 184 1 1.643452676 0.022727273 0.266666667 0.5 30 0 0 44 3L:8564443-8564485 7 41.5 2428 FBgn0260442 4425.776667 56.13 85.46 0.009376885 0.739355069 0.485607302 0 0 0 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT 3L 8564909 8564915 + 3L_8564909_8564915_+ 0.658401086 0.657658355 0.658029721 0.000525168 rhea FBtr0333109 8564005 8574409 3L + 8564882 8564936 3'utr rhea FlyBase G28837.1 TGATCCTAAGCTGAAGGCCGATCTCCTGGCAGCTGCTCGTGATGTGTCCAAGAGC 33 8564908 0.845735018 4 32 151 0.973684211 1.568201724 0.342105263 0.121212121 0.236842105 33 1 0 37 3L:8564882-8564936 7 rhea FBtr0333109 8564005 8574409 GGCAGCT 7mer-m8 dme-miR-980-3p 3L + 8564882 8564956 3'utr rhea FlyBase G21842.1 TGATCCTAAGCTGAAGGCCGATCTCCTGGCAGCTGCTCGTGATGTGTCCAAGAGCCTCACTGATATGTTGGAGCA 24 8564908 0.931830374 5 23 91 1 1.612783857 0.414634146 0.416666667 0.658536585 24 0 0 41 3L:8564882-8564956 7 27 2429 FBgn0260442 4425.776667 56.13 85.46 0.006100624 0.481026189 0.315937281 1 1 1 0.15 dme-miR-14-3p 6mer2-7 AGACTG 3L 8566049 8566054 + 3L_8566049_8566054_+ 0.99938421 0.999927023 0.999655617 0.000383818 rhea FBtr0333109 8564005 8574409 3L + 8566034 8566061 3'utr rhea FlyBase G28846.1 GAATCCAGCTATCATAGACTGTGCTGAT 14 8566048 0.739556424 3 11 78 0.866666667 1.113943352 0.066666667 0.071428571 0.133333333 14 2 0 13 3L:8566034-8566061 6 rhea FBtr0333109 8564005 8574409 AGACTG 6mer2-7 dme-miR-14-3p 3L + 8566035 8566063 3'utr rhea FlyBase G21847.1 AATCCAGCTATCATAGACTGTGCTGATGA 7 8566048 0.703734284 4 7 39 1 0.954242509 0.222222222 0.142857143 0.333333333 7 0 0 9 3L:8566035-8566063 6 10.5 2430 FBgn0260442 4425.776667 56.13 85.46 0.002372465 0.18706574 0.122864498 1 1 1 0.15 dme-miR-184-3p 7mer-A1 CCGTCCA 3L 8566280 8566286 + 3L_8566280_8566286_+ 0.782022775 0.821676696 0.801849735 0.028039542 rhea FBtr0333109 8564005 8574409 3L + 8566256 8566300 3'utr rhea FlyBase G28847.1 AATGAGTGAATTCCCACCTTCAAGCCGTCCATATGCCACTCTGCA 36 8566287 0.710957753 6 35 215 0.975609756 1.602059991 0.195121951 0.111111111 0.219512195 36 1 0 40 3L:8566256-8566300 7 rhea FBtr0333109 8564005 8574409 CCGTCCA 7mer-A1 dme-miR-184-3p 3L + 8566259 8566303 3'utr rhea FlyBase G21848.1 GAGTGAATTCCCACCTTCAAGCCGTCCATATGCCACTCTGCAATC 8 8566287 0.951168645 2 7 38 1 1 0.6 0.25 0.4 8 0 0 10 3L:8566259-8566303 7 21 2431 FBgn0260442 4425.776667 56.13 85.46 0.00474493 0.37413148 0.245728996 -7 -7 -7 0.15 dme-miR-1007-3p 7mer-A1 GAGCTTA 3L 8567694 8567700 + 3L_8567694_8567700_+ 0.823349555 0.823349562 0.823349559 0 rhea FBtr0333109 8564005 8574409 3L + 8567667 8567706 3'utr rhea FlyBase G28853.1 AGTGGCCAGACGATGAACTCTGCTTCCGAGCTTATTGACA 6 8567701 0.815675635 5 5 43 0.833333333 0.698970004 0.166666667 0 0 6 1 0 5 3L:8567667-8567706 7 rhea FBtr0333109 8564005 8574409 GAGCTTA 7mer-A1 dme-miR-1007-3p 3L + 8567652 8567711 3'utr rhea FlyBase G21851.1 AACTTGCATGGATTCAGTGGCCAGACGATGAACTCTGCTTCCGAGCTTATTGACAAACTG 5 8567690 0.972506348 4 5 31 1 0.84509804 0.285714286 0.2 0.428571429 5 0 0 7 3L:8567652-8567711 7 4 2432 FBgn0260442 4425.776667 56.13 85.46 0.000903796 0.071263139 0.046805523 -7 4 -1.5 0.15 dme-miR-14-3p 7mer-m8 AAGACTG 3L 8570998 8571004 + 3L_8570998_8571004_+ 0.667484594 0.644364769 0.655924682 0.016348167 rhea FBtr0333109 8564005 8574409 3L + 8570981 8571069 3'utr rhea FlyBase G28858.1 ATGTGTCCTCACTACTAAAGACTGTGAAGGCTGTCGAGGATGAGCACACTCGCGGAACTCGTGCAATGGAGGCCACCGTAGAAGCCATC 31 8571005 0.988873903 4 29 166 0.944444444 1.230448921 0.472222222 0.161290323 0.277777778 31 1 1 34 3L:8570981-8571069 7 rhea FBtr0333109 8564005 8574409 AAGACTG 7mer-m8 dme-miR-14-3p 3L + 8570983 8571046 3'utr rhea FlyBase G21854.1 GTGTCCTCACTACTAAAGACTGTGAAGGCTGTCGAGGATGAGCACACTCGCGGAACTCGTGCAA 11 8571005 0.971328084 5 9 55 0.952380952 1.301029996 0.476190476 0.636363636 0.80952381 11 1 0 20 3L:8570983-8571046 7 17.5 2433 FBgn0260442 4425.776667 56.13 85.46 0.003954108 0.311776234 0.204774163 -7 -7 -7 0.15 dme-bantam-3p 6mer3-8 TGATCT 3L 8572052 8572057 + 3L_8572052_8572057_+ 0.77206041 0.716283391 0.744171901 0.039440295 rhea FBtr0333109 8564005 8574409 3L + 8572037 8572076 3'utr rhea FlyBase G28863.1 TGAAGTTTGACGAAATGATCTTGGAGGCTGCCAAGGGCAT 27 8572052 0.863490363 3 24 131 0.866666667 1.113943352 0.366666667 0.111111111 0.2 27 3 1 26 3L:8572037-8572076 6 rhea FBtr0333109 8564005 8574409 TGATCT 6mer3-8 dme-bantam-3p 3L + 8572036 8572077 3'utr rhea FlyBase G21858.1 ATGAAGTTTGACGAAATGATCTTGGAGGCTGCCAAGGGCATA 12 8572052 0.91152815 2 12 62 1 1.301029996 0.3 0.5 0.7 12 0 0 20 3L:8572036-8572077 6 18 2434 FBgn0260442 4425.776667 56.13 85.46 0.004067083 0.320684126 0.210624854 0 0 0 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 8574024 8574030 + 3L_8574024_8574030_+ 0.661615393 0.661581241 0.661598317 2.42E-05 rhea FBtr0333109|FBtr0333108|FBtr0333106|FBtr0333107|FBtr0333105|FBtr0305210 8564005|8573788|8573788|8573788|8573788|8573788 8574409|8574409|8574409|8574409|8574409|8574409 3L + 8573997 8574046 3'utr rhea FlyBase G28873.1 AATCAAGTTTCAATGTTTTCGTATATCTGTGTTCTACGTGTTTATTTGCC 11 8574022 0.992622032 5 9 121 0.916666667 1.041392685 0.083333333 0.090909091 0.166666667 11 1 0 11 3L:8573997-8574046 7 rhea FBtr0333105|FBtr0305210|FBtr0333109|FBtr0333108|FBtr0333106|FBtr0333107 8573788|8573788|8564005|8573788|8573788|8573788 8574409|8574409|8574409|8574409|8574409|8574409 TGTGTTC 7mer-m8 dme-miR-317-3p 3L + 8574008 8574070 3'utr rhea FlyBase G21864.1 AATGTTTTCGTATATCTGTGTTCTACGTGTTTATTTGCCATTAAATTGCCCATATATATTTAT 13 8574022 0.991195885 7 13 138 1 1.322219295 0.19047619 0.384615385 0.619047619 13 0 0 21 3L:8574008-8574070 7 8.5 2435 FBgn0260442 4425.776667 56.13 85.46 0.001920567 0.151434171 0.099461736 2 2 2 0.15 dme-miR-305-3p 7mer-m8 ATGTGCC 3L 8574434 8574440 - 3L_8574434_8574440_- 0.674507871 0.674345262 0.674426566 0.000114976 CG6638 FBtr0076651 8574405 8574574 3L - 8574419 8574451 3'utr CG6638 FlyBase G35451.1 TATGTATATGTATGTGCCTTAATAAAAGAAGTA 8 8574438 0.880945592 5 8 67 1 1 0.1 0.25 0.4 8 0 0 10 3L:8574419-8574451 7 CG6638 FBtr0076651 8574405 8574574 ATGTGCC 7mer-m8 dme-miR-305-3p 3L - 8574417 8574446 3'utr CG6638 FlyBase G26825.1 ATATGTATGTGCCTTAATAAAAGAAGTAAA 6 8574438 0.698774397 3 6 39 1 0.954242509 0 0.5 0.666666667 6 0 0 9 3L:8574417-8574446 7 7 2436 FBgn0035911 221 17.94666667 27.59333333 0.031674208 0.390044577 0.253684465 -2 -2 -2 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA 3L 8574495 8574502 - 3L_8574495_8574502_- 0.624745941 0.625028219 0.62488708 0.000199616 CG6638 FBtr0076651 8574405 8574574 3L - 8574483 8574563 3'utr CG6638 FlyBase G35452.1 CATCTCTTTTTCCAATGTGGCAATAACGTGGACCAACTCTACTACCTGACAGACTAAATGTTGCATTTATTTTTTGAAGAT 41 8574504 0.885115464 12 37 318 0.916666667 1.643452676 0.125 0.170731707 0.291666667 41 4 0 44 3L:8574483-8574563 8 CG6638 FBtr0076651 8574405 8574574 TGCATTTA 8mer-A1 dme-miR-277-3p 3L - 8574485 8574536 3'utr CG6638 FlyBase G26826.1 GTGGACCAACTCTACTACCTGACAGACTAAATGTTGCATTTATTTTTTGAAG 14 8574503 0.849276496 5 13 125 0.909090909 1.301029996 0.318181818 0.5 0.681818182 14 2 0 20 3L:8574485-8574536 8 17 2437 FBgn0035911 221 17.94666667 27.59333333 0.076923077 0.947251114 0.616090843 2 1 1.5 0.15 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 8678483 8678490 + 3L_8678483_8678490_+ 0.643558185 0.643558335 0.64355826 7.07E-08 h FBtr0100153|FBtr0076569 8678422|8678422 8679253|8679253 3L + 8678265 8678585 stop_codon h FlyBase G28893.1 AGCTGTAGCTACGCCCCGCCCAGTCCGGCCAACTCTAGCTACGAGCCCATGGACATCAAGCCATCGGTCATCCAGCGCGTGCCAATGGAGCAGCAGCCCCTGTCGCTGGTGATCAAGAAGCAGATCAAGGAGGAGGAGCAGCCCTGGCGGCCCTGGTAGAGGGTGTCTGCATATGCATATCATATAGCATAGCCACCCCTATCGAATCTCCCGCTTTTAAGACTGACCCCCCACAACTCATCCAACTCGCACACATGCGCAGGCGTTGTGCGCATGCGCGTAGACATTTCACATCATTCGCCGGGATTGCGCAAATGTTGC 1311 8678481 0.94834906 48 1139 6193 0.867421719 1.596097044 0.113257828 0.118230359 0.229846769 1311 167 32 1302 3L:8678265-8678585 8 h FBtr0076569|FBtr0100153 8678422|8678422 8679253|8679253 AAGACTGA 8mer-A1 dme-miR-14-3p 3L + 8678259 8678596 stop_codon h FlyBase G21885.1 AGCAGCAGCTGTAGCTACGCCCCGCCCAGTCCGGCCAACTCTAGCTACGAGCCCATGGACATCAAGCCATCGGTCATCCAGCGCGTGCCAATGGAGCAGCAGCCCCTGTCGCTGGTGATCAAGAAGCAGATCAAGGAGGAGGAGCAGCCCTGGCGGCCCTGGTAGAGGGTGTCTGCATATGCATATCATATAGCATAGCCACCCCTATCGAATCTCCCGCTTTTAAGACTGACCCCCCACAACTCATCCAACTCGCACACATGCGCAGGCGTTGTGCGCATGCGCGTAGACATTTCACATCATTCGCCGGGATTGCGCAAATGTTGCTTTGAAGTGTT 885 8678481 0.928873114 47 731 4117 0.827932099 1.729569726 0.143518519 0.340112994 0.549382716 885 204 19 1073 3L:8678259-8678596 8 715 2438 FBgn0001168 3068.926667 171.7433333 259.7866667 0.232980477 4.163189255 2.752258263 2 2 2 0.15 dme-bantam-3p 6mer3-8 TGATCT 3L 8725790 8725795 + 3L_8725790_8725795_+ 0.999913184 0.986849116 0.99338115 0.009237714 CG6511 FBtr0333887|FBtr0076570 8725510|8725510 8726108|8726108 3L + 8725764 8725865 3'utr CG6511 FlyBase G28919.1 TTTGTAAGCGTTTGGAGACAGTTTTCTGATCTTGTCATCGGCAGCTCGGCTCTTATAAAGTCTGAGGGCCCTGGCCCAAACGTGTCGTTTATCTAGATTAGC 30 8725790 0.808227039 13 28 236 0.921052632 1.544068044 0.131578947 0.233333333 0.394736842 30 3 0 35 3L:8725764-8725865 6 CG6511 FBtr0333887|FBtr0076570 8725510|8725510 8726108|8726108 TGATCT 6mer3-8 dme-bantam-3p 3L + 8725770 8725841 3'utr CG6511 FlyBase G21903.1 AGCGTTTGGAGACAGTTTTCTGATCTTGTCATCGGCAGCTCGGCTCTTATAAAGTCTGAGGGCCCTGGCCCA 23 8725790 0.675211494 8 16 169 0.717948718 1.447158031 0.205128205 0.652173913 0.794871795 23 11 0 28 3L:8725770-8725841 6 15 2439 FBgn0035923 413.53 11.23333333 17.25666667 0.036273064 1.335311573 0.869229283 0 0 0 0.15 dme-miR-79-3p 7mer-m8 TAGCTTT 3L 878166 878172 - 3L_878166_878172_- 0.569956068 0.571134503 0.570545285 0.000833255 CG13907 FBtr0072593|FBtr0345005 877289|877289 878452|878452 3L - 878051 878440 3'utr CG13907 FlyBase G33163.1 CGGTTGGAAAGGAGAGAGAAGTGAATTTACAGGGGGCAGTGCGGAGCTTAAGAGGATCCGGTGAGATATTTTTCTATTTACTTATACAGCAGAGGAGGAGGAGATCAGAGATCGAGCACACCTATATACAAAGTGGAGAAGACGGATGGATATATATATAGCCAGCCCCACACCATATATACATATATATATATATATACCTTTAAGCCTAGGCAACAGCGGAGGATGAAGTGCGGAAAATTCACTTTTCTACCAGGAGAACTCAGCTTAGCTTTCGATAAGATATAGAGAAACCTTCGGCTATATATAAAGTTATACTACGCTCATAAATTAACGATCGAAAACTGATACCGATCGCTGGTAGATTGCAACTGTTATACAGCAACCACA 246 878173 0.752724841 45 215 1070 0.884615385 1.289177169 0.22027972 0.142276423 0.262237762 246 21 12 253 3L:878051-878440 7 CG13907 FBtr0345005|FBtr0072593 877289|877289 878452|878452 TAGCTTT 7mer-m8 dme-miR-79-3p 3L - 878129 878187 3'utr CG13907 FlyBase G25093.1 CAGGAGAACTCAGCTTAGCTTTCGATAAGATATAGAGAAACCTTCGGCTATATATAAAG 24 878173 0.788760846 4 22 142 0.894736842 1.230448921 0.157894737 0.416666667 0.631578947 24 3 1 34 3L:878129-878187 7 33 2440 FBgn0035173 483.94 12.91333333 19.71333333 0.068190272 2.555498193 1.673993913 1 1 1 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3L 8890906 8890912 + 3L_8890906_8890912_+ 0.443118244 0.443088275 0.44310326 2.11E-05 dally FBtr0305901 8889317 8891192 3L + 8890877 8890932 3'utr dally FlyBase G28925.1 ATTTGTATCATTATTATTTAACTATTGCATGTGATTAATAATATTTAAGTTAAACG 47 8890902 0.785910368 5 43 526 0.921568627 1.371067862 0.058823529 0.042553191 0.117647059 47 3 1 47 3L:8890877-8890932 7 dally FBtr0305901 8889317 8891192 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 8890886 8890930 3'utr dally FlyBase G21910.1 ATTATTATTTAACTATTGCATGTGATTAATAATATTTAAGTTAAA 22 8890902 0.769376841 4 18 236 0.842105263 1.505149978 0 0.454545455 0.684210526 22 6 0 32 3L:8890886-8890930 7 33.5 2441 FBgn0263930 612.92 16.66666667 25.74 0.054656399 2.01 1.301476301 4 4 4 0.15 dme-miR-986-5p 7mer-m8 ATTCGAG 3L 892325 892331 + 3L_892325_892331_+ 0.667660292 0.650430861 0.659045577 0.012183026 CG32479 FBtr0333267|FBtr0333266|FBtr0072589 892174|892174|892174 895313|893520|893520 3L + 892275 892357 3'utr CG32479 FlyBase G26957.1 GCGAGTTTGGTTTTATATGCATATACATATACAAATTAACAATTAGATATATTCGAGCGGTATATAGTTAAGCCCAAAGTCCA 15 892323 0.72800944 11 13 104 0.894736842 0.929418926 0.105263158 0.133333333 0.315789474 15 1 1 17 3L:892275-892357 7 CG32479 FBtr0072589|FBtr0333266|FBtr0333267 892174|892174|892174 893520|893520|895313 ATTCGAG 7mer-m8 dme-miR-986-5p 3L + 892267 892343 3'utr CG32479 FlyBase G20405.1 GCGAGAATGCGAGTTTGGTTTTATATGCATATACATATACAAATTAACAATTAGATATATTCGAGCGGTATATAGTT 9 892310 0.987675896 6 7 73 0.857142857 1.079181246 0.142857143 0.333333333 0.571428571 9 2 0 12 3L:892267-892343 7 6 2442 FBgn0052479 4815.663333 78.18666667 119.8133333 0.001245934 0.076739427 0.050077899 2 15 8.5 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 3L 892480 892486 + 3L_892480_892486_+ 0.782326867 0.782391136 0.782359002 4.54E-05 CG32479 FBtr0333267|FBtr0333266|FBtr0072589 892174|892174|892174 895313|893520|893520 3L + 892425 892521 3'utr CG32479 FlyBase G26958.2 TTAAGGTTGAGTAGAAAAATAGGCAGCAAAAGAAACTCGTTGGAACGAAAACTTTGTACAAAGAGAAACGAAAGAACTCTGTAAACTAAACAGCGAG 313 892478 0.989908944 14 307 1020 0.98944591 1.971971276 0.319261214 0.166134185 0.311345646 313 1 3 375 3L:892425-892521 7 CG32479 FBtr0072589|FBtr0333266|FBtr0333267 892174|892174|892174 893520|893520|895313 GTACAAA 7mer-A1 dme-miR-305-5p 3L + 892416 892521 3'utr CG32479 FlyBase G20406.2 AGACTAGAATTAAGGTTGAGTAGAAAAATAGGCAGCAAAAGAAACTCGTTGGAACGAAAACTTTGTACAAAGAGAAACGAAAGAACTCTGTAAACTAAACAGCGAG 243 892478 0.940600746 14 238 821 0.983002833 2.06320822 0.348441926 0.33744856 0.543909348 243 4 2 347 3L:892416-892521 7 201.5 2443 FBgn0052479 4815.663333 78.18666667 119.8133333 0.041842626 2.577165757 1.681782773 2 2 2 0.15 dme-miR-1006-3p 6mer2-7 GAATTT 3L 8932547 8932552 - 3L_8932547_8932552_- 0.848274434 0.999999929 0.924137182 0.10728613 CG43783 FBtr0331518|FBtr0331519|FBtr0331516|FBtr0331517 8932233|8932233|8932233|8932233 8933062|8933062|8933062|8933062 3L - 8932538 8932578 3'utr CG43783 FlyBase G35492.1 AAGTAGATTAGTCCTAGAATGCGTGTGAATTTTAAATAAGA 18 8932559 0.873391453 3 17 152 0.956521739 1.342422681 0.086956522 0.277777778 0.434782609 18 1 0 22 3L:8932538-8932578 6 CG43783 FBtr0331517|FBtr0331516|FBtr0331519|FBtr0331518 8932233|8932233|8932233|8932233 8933062|8933062|8933062|8933062 GAATTT 6mer2-7 dme-miR-1006-3p 3L - 8932543 8932573 3'utr CG43783 FlyBase G26854.1 GATTAGTCCTAGAATGCGTGTGAATTTTAAA 7 8932548 0.713790937 3 7 57 1 1.079181246 0.416666667 0.428571429 0.666666667 7 0 0 12 3L:8932543-8932573 6 12 2444 FBgn0264305 845.6866667 21.05333333 32.24666667 0.014189653 0.569981001 0.372131486 7 -4 1.5 0.15 dme-miR-986-5p 7mer-m8 ATTCGAG 3L 893255 893261 + 3L_893255_893261_+ 0.643095339 0.515156923 0.579126131 0.09046611 CG32479 FBtr0333267|FBtr0333266|FBtr0072589 892174|892174|892174 895313|893520|893520 3L + 893214 893307 3'utr CG32479 FlyBase G26962.1 GATTGTCTCCCCGGCTTGGATGCGATGTTTGCCTTCATGATATTCGAGTCCTTAACTTTCTTTTCTCAGACCTAGAGCATTTAGTTTGTACATC 37 893256 0.989470011 10 36 349 0.955555556 1.633468456 0.044444444 0.162162162 0.311111111 37 2 0 43 3L:893214-893307 7 CG32479 FBtr0072589|FBtr0333266|FBtr0333267 892174|892174|892174 893520|893520|895313 ATTCGAG 7mer-m8 dme-miR-986-5p 3L + 893217 893276 3'utr CG32479 FlyBase G20411.1 TGTCTCCCCGGCTTGGATGCGATGTTTGCCTTCATGATATTCGAGTCCTTAACTTTCTTT 28 893255 0.759927122 7 26 255 0.961538462 1.397940009 0.038461538 0.5 0.730769231 28 1 1 50 3L:893217-893276 7 28 2445 FBgn0052479 4815.663333 78.18666667 119.8133333 0.00581436 0.358117326 0.233696862 -1 0 -0.5 0.15 dme-miR-965-3p 7mer-A1 ACGCTTA 3L 8932826 8932832 - 3L_8932826_8932832_- 0.638170301 0.763394675 0.700782488 0.088547022 CG43783 FBtr0331518|FBtr0331519|FBtr0331516|FBtr0331517 8932233|8932233|8932233|8932233 8933062|8933062|8933062|8933062 3L - 8932812 8932875 3'utr CG43783 FlyBase G35493.1 GATGAGTACAAGGGACGACCGATTCCGAATGACAAGTTACAAAACGCTTATTTTCATCACATTC 14 8932824 0.973028007 7 12 73 0.941176471 1.204119983 0.235294118 0.214285714 0.352941176 14 1 0 16 3L:8932812-8932875 7 CG43783 FBtr0331517|FBtr0331516|FBtr0331519|FBtr0331518 8932233|8932233|8932233|8932233 8933062|8933062|8933062|8933062 ACGCTTA 7mer-A1 dme-miR-965-3p 3L - 8932816 8932847 3'utr CG43783 FlyBase G26855.1 ATGACAAGTTACAAAACGCTTATTTTCATCAC 7 8932825 0.60037647 3 6 47 1 1 0.1 0.285714286 0.5 7 0 0 10 3L:8932816-8932847 7 7 2446 FBgn0264305 845.6866667 21.05333333 32.24666667 0.008277297 0.332488917 0.2170767 -8 -7 -7.5 0.15 dme-bantam-3p 6mer2-7 GATCTC 3L 8932914 8932919 - 3L_8932914_8932919_- 0.999900207 0.999829488 0.999864847 5.00E-05 CG43783 FBtr0331518|FBtr0331519|FBtr0331516|FBtr0331517 8932233|8932233|8932233|8932233 8933062|8933062|8933062|8933062 3L - 8932890 8932938 5'utr-coding CG43783 FlyBase G35494.1 AAGCTTAGATTAAATTTTCGATCTCCAGTTCCGGTTTCGAATACTTAAT 19 8932923 0.985993081 6 18 186 0.954545455 1.021189299 0.045454545 0.157894737 0.272727273 19 0 1 21 3L:8932890-8932938 6 CG43783 FBtr0331517|FBtr0331516|FBtr0331519|FBtr0331518 8932233|8932233|8932233|8932233 8933062|8933062|8933062|8933062 GATCTC 6mer2-7 dme-bantam-3p 3L - 8932897 8932937 5'utr-coding CG43783 FlyBase G26856.1 AGCTTAGATTAAATTTTCGATCTCCAGTTCCGGTTTCGAAT 14 8932923 0.686548543 5 11 136 0.8 1.204119983 0 0.357142857 0.55 14 4 0 16 3L:8932897-8932937 6 16 2447 FBgn0264305 845.6866667 21.05333333 32.24666667 0.018919537 0.759974668 0.496175315 4 4 4 0.15 dme-miR-999-3p 6mer3-8 AGTTAA 3L 893403 893408 + 3L_893403_893408_+ 0.802550494 0.993216581 0.897883538 0.134821292 CG32479 FBtr0333267|FBtr0333266|FBtr0072589 892174|892174|892174 895313|893520|893520 3L + 893337 893422 3'utr CG32479 FlyBase G26963.1 AAAAGATTTGAATGGGAATAATTATTAAATGTAATCGGGTACGAACTAAAGCTAATCAACCATACTAGTTAATAGATGTCTTACAA 24 893392 0.882833092 8 22 177 0.961538462 1.397940009 0.192307692 0.130434783 0.230769231 23 1 0 25 3L:893337-893422 6 CG32479 FBtr0072589|FBtr0333266|FBtr0333267 892174|892174|892174 893520|893520|895313 AGTTAA 6mer3-8 dme-miR-999-3p 3L + 893368 893448 3'utr CG32479 FlyBase G20412.1 TAATCGGGTACGAACTAAAGCTAATCAACCATACTAGTTAATAGATGTCTTACAAACGTATACACCCATATATATTTTCTT 13 893417 0.872728849 7 13 97 1 1.278753601 0 0.307692308 0.526315789 13 0 0 19 3L:893368-893448 6 10.5 2448 FBgn0052479 4815.663333 78.18666667 119.8133333 0.002180385 0.134293997 0.087636323 11 -14 -1.5 0.15 dme-miR-263a-5p 6mer3-8 GTGCCA 3L 893491 893496 + 3L_893491_893496_+ 1 0.999999352 0.999999676 4.24E-07 CG32479 FBtr0333267|FBtr0333266|FBtr0072589 892174|892174|892174 895313|893520|893520 3L + 893469 893526 3'utr-intron CG32479 FlyBase G26964.1 ATATATATTATTTATAGATATCGTGCCAATGTTAAAACATCTAAAAATTTTCAAAAAA 12 893499 0.708699866 8 12 106 1 1.079181246 0.166666667 0 0 12 0 0 12 3L:893469-893526 6 CG32479 FBtr0072589|FBtr0333266|FBtr0333267 892174|892174|892174 893520|893520|895313 GTGCCA 6mer3-8 dme-miR-263a-5p 3L + 893473 893518 3'utr CG32479 FlyBase G20413.1 ATATTATTTATAGATATCGTGCCAATGTTAAAACATCTAAAAATTT 11 893492 0.771565008 4 10 87 0.9375 1.176091259 0 0.363636364 0.5625 11 1 0 15 3L:893473-893518 6 10.5 2449 FBgn0052479 4815.663333 78.18666667 119.8133333 0.002180385 0.134293997 0.087636323 -8 -1 -4.5 0.15 dme-miR-79-3p 7mer-A1 AGCTTTA 3L 8939394 8939400 - 3L_8939394_8939400_- 0.823349561 0.823349562 0.823349561 0 orb2 FBtr0331515|FBtr0331514 8937098|8939063 8942890|8942890 3L - 8939376 8939411 3'utr orb2 FlyBase G35506.1 GTCGGATTGACAGCTTTAGTTTTATAGAGAATCTTG 12 8939395 0.870360101 5 12 109 1 1.204119983 0.25 0.25 0.4375 12 0 0 16 3L:8939376-8939411 7 orb2 FBtr0331515|FBtr0331514 8937098|8939063 8942890|8942890 AGCTTTA 7mer-A1 dme-miR-79-3p 3L - 8939380 8939410 3'utr orb2 FlyBase G26863.1 TCGGATTGACAGCTTTAGTTTTATAGAGAAT 5 8939396 0.78121999 2 4 47 0.769230769 1 0.230769231 0.8 0.923076923 5 3 0 10 3L:8939380-8939410 7 8.5 2450 FBgn0264307 292.6133333 6.573333333 10.15 0.029048574 1.293103448 0.837438424 -5 -4 -4.5 0.15 dme-miR-8-3p 8mer-A1 CAGTATTA 3L 8941261 8941268 - 3L_8941261_8941268_- 0.389601034 0.342100913 0.365850973 0.033587643 orb2 FBtr0331515|FBtr0331514 8937098|8939063 8942890|8942890 3L - 8941247 8941294 3'utr orb2 FlyBase G35508.1 AACAAAACAGTCAAATTGCTTGTGTTCAGTATTATGATTTATTTATGA 48 8941273 0.617789618 7 48 460 1 1.77815125 0.233333333 0.1875 0.35 48 0 0 60 3L:8941247-8941294 8 orb2 FBtr0331515|FBtr0331514 8937098|8939063 8942890|8942890 CAGTATTA 8mer-A1 dme-miR-8-3p 3L - 8941249 8941290 3'utr orb2 FlyBase G26865.1 AAACAGTCAAATTGCTTGTGTTCAGTATTATGATTTATTTAT 40 8941274 0.659603857 5 38 390 0.962962963 1.716003344 0.203703704 0.275 0.462962963 40 2 0 52 3L:8941249-8941290 8 44 2451 FBgn0264307 292.6133333 6.573333333 10.15 0.150369088 6.693711968 4.334975369 5 6 5.5 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 3L 8941368 8941374 - 3L_8941368_8941374_- 0.620101374 0.617767032 0.618934203 0.00165067 orb2 FBtr0331515|FBtr0331513|FBtr0331514 8937098|8941311|8939063 8942890|8942890|8942890 3L - 8941350 8941402 3'utr orb2 FlyBase G35509.1 AACAACACATTTACACTGAAAGTCTGTTTGCATTTGTTGCCATTTGGCTTAAT 14 8941375 0.870932845 5 13 118 0.941176471 1.204119983 0.176470588 0.214285714 0.352941176 14 1 0 16 3L:8941350-8941402 7 orb2 FBtr0331515|FBtr0331513|FBtr0331514 8937098|8941311|8939063 8942890|8942890|8942890 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 8941350 8941402 3'utr orb2 FlyBase G26866.1 AACAACACATTTACACTGAAAGTCTGTTTGCATTTGTTGCCATTTGGCTTAAT 11 8941375 0.858351224 5 11 102 1 1.176091259 0.066666667 0.272727273 0.466666667 11 0 0 15 3L:8941350-8941402 7 9.5 2452 FBgn0264307 292.6133333 6.573333333 10.15 0.032466053 1.445233266 0.935960591 1 1 1 0.15 dme-miR-282-5p 7mer-A1 GAGGCTA 3L 8942186 8942192 - 3L_8942186_8942192_- 0.807165366 0.798629528 0.802897447 0.006035793 orb2 FBtr0331515|FBtr0331513|FBtr0331514 8937098|8941311|8939063 8942890|8942890|8942890 3L - 8942147 8942205 3'utr orb2 FlyBase G35513.1 TTGTATGCCAATCGAGGCTAGTCCTAAAATTATTAGTGAGCTGCTCACCCTCTCTCGAA 12 8942195 0.971319829 5 10 65 0.823529412 1.146128036 0.235294118 0.333333333 0.529411765 12 3 0 14 3L:8942147-8942205 7 orb2 FBtr0331515|FBtr0331513|FBtr0331514 8937098|8941311|8939063 8942890|8942890|8942890 GAGGCTA 7mer-A1 dme-miR-282-5p 3L - 8942133 8942208 3'utr orb2 FlyBase G26867.1 ATCTTGTATGCCAATCGAGGCTAGTCCTAAAATTATTAGTGAGCTGCTCACCCTCTCTCGAAAAGGCTTTTTGCTT 10 8942181 0.974224651 7 10 63 1 1.113943352 0.153846154 0.3 0.461538462 10 0 0 13 3L:8942133-8942208 7 8 2453 FBgn0264307 292.6133333 6.573333333 10.15 0.027339834 1.21703854 0.78817734 3 -11 -4 0.15 dme-miR-252-5p 6mer3-8 GTACTT 3L 8942359 8942364 - 3L_8942359_8942364_- 0.958525744 0.957574518 0.958050131 0.0006726 orb2 FBtr0331515|FBtr0331513|FBtr0331514|FBtr0331512 8937098|8941311|8939063|8942309 8942890|8942890|8942890|8942890 3L - 8942343 8942392 3'utr orb2 FlyBase G35515.1 TGCGTTCGATGCCTGCACAGTATTTTTTGTACTTTATATTTTTAGCAACA 24 8942368 0.989622435 8 20 181 0.935483871 1.462397998 0.258064516 0.208333333 0.387096774 24 2 0 29 3L:8942343-8942392 6 orb2 FBtr0331515|FBtr0331513|FBtr0331514|FBtr0331512 8937098|8941311|8939063|8942309 8942890|8942890|8942890|8942890 GTACTT 6mer3-8 dme-miR-252-5p 3L - 8942362 8942397 3'utr orb2 FlyBase G26869.1 GATTTTGCGTTCGATGCCTGCACAGTATTTTTTGTA 20 8942367 0.643246597 7 19 190 0.933333333 1.447158031 0.1 0.4 0.6 20 2 0 28 3L:8942362-8942397 2 14 2454 FBgn0264307 292.6133333 6.573333333 10.15 0.04784471 2.129817444 1.379310345 4 3 3.5 0.15 dme-miR-1008-3p 6mer2-7 GCTGTG 3L 894753 894758 + 3L_894753_894758_+ 0.999999999 0.99999996 0.999999979 0 CG32479 FBtr0333267 892174 895313 3L + 894685 894776 3'utr CG32479 FlyBase G26971.1 TTGTAATACCCAAGTCACATTCTGTTGTCCCCGATTAATGTATGTTTTAGTTTTAAGTAGTTTCTAAGGCTGTGTAACTAACTAACATAAGT 49 894746 0.98993941 14 45 542 0.927272727 1.707570176 0.036363636 0.102040816 0.2 49 4 0 51 3L:894685-894776 6 CG32479 FBtr0333267 892174 895313 GCTGTG 6mer2-7 dme-miR-1008-3p 3L + 894689 894776 3'utr CG32479 FlyBase G20419.1 AATACCCAAGTCACATTCTGTTGTCCCCGATTAATGTATGTTTTAGTTTTAAGTAGTTTCTAAGGCTGTGTAACTAACTAACATAAGT 42 894747 0.993944659 14 35 451 0.852459016 1.414973348 0.081967213 0.357142857 0.557377049 42 8 1 52 3L:894689-894776 6 40.5 2455 FBgn0052479 4815.663333 78.18666667 119.8133333 0.008410056 0.517991132 0.338025818 7 6 6.5 0.15 dme-miR-14-3p 7mer-m8 AAGACTG 3L 8961313 8961319 - 3L_8961313_8961319_- 0.67138987 0.671103931 0.6712469 0.000202233 CG5660 FBtr0346542|FBtr0076560 8961272|8961272 8961399|8961399 3L - 8961298 8961336 3'utr CG5660 FlyBase G35523.1 CTGTTTGTTTAGAATTAAAGACTGCAATATTTATTAAAT 14 8961322 0.755189438 5 14 114 1 1.176091259 0.133333333 0.071428571 0.133333333 14 0 0 15 3L:8961298-8961336 7 CG5660 FBtr0346542|FBtr0076560 8961272|8961272 8961399|8961399 AAGACTG 7mer-m8 dme-miR-14-3p 3L - 8961298 8961330 3'utr CG5660 FlyBase G26875.1 GTTTAGAATTAAAGACTGCAATATTTATTAAAT 8 8961322 0.73731544 5 8 54 1 1.041392685 0.272727273 0.375 0.545454545 8 0 0 11 3L:8961298-8961330 7 11 2456 FBgn0035942 106.3333333 4.03 6.186666667 0.103448276 2.729528536 1.778017241 3 3 3 0.15 dme-miR-8-3p 7mer-A1 AGTATTA 3L 8971682 8971688 + 3L_8971682_8971688_+ 0.823187287 0.823349547 0.823268417 0.000114693 CG5026 FBtr0076516 8971179 8971752 3L + 8971584 8971694 3'utr CG5026 FlyBase G28965.1 TTTTATGGAATTTTTAGCGTATAAGTCTCCAAAATTACCTATTTATAGTACTTACTTGTGTCAGTTATTTAGTGGTCAACAAGCCACAGATCAAATTAAGTATTATAAACT 9 8971680 0.984019702 6 9 78 1 0.954242509 0 0 0 9 0 0 9 3L:8971584-8971694 7 CG5026 FBtr0076516 8971179 8971752 AGTATTA 7mer-A1 dme-miR-8-3p 3L + 8971661 8971697 3'utr CG5026 FlyBase G21935.1 AACAAGCCACAGATCAAATTAAGTATTATAAACTCAA 5 8971680 0.976598387 3 5 34 1 0.698970004 0 0 0 5 0 0 5 3L:8971661-8971697 7 4.5 2457 FBgn0035945 330 15.41 23.52 0.013636364 0.29201817 0.191326531 2 2 2 0.15 dme-miR-252-5p 6mer3-8 GTACTT 3L 8972165 8972170 - 3L_8972165_8972170_- 0.99985382 0.999362994 0.999608407 0.000347048 pix FBtr0076557|FBtr0076558 8972054|8972054 8972332|8972332 3L - 8972145 8972256 3'utr pix FlyBase G35527.1 TTCTTTCGTTGAAGAACACATTTGCTTTCAAATTAATTTGTTATTGTTGTCGAGGATTGCGTACAATCGAAAATTGGGGATTAATTGTACTTGATTAAAGTGAGTTTTATAT 32 8972171 0.769394638 12 30 265 0.972222222 1.243038049 0.361111111 0.125 0.222222222 32 0 1 35 3L:8972145-8972256 6 pix FBtr0076557|FBtr0076558 8972054|8972054 8972332|8972332 GTACTT 6mer3-8 dme-miR-252-5p 3L - 8972143 8972196 3'utr pix FlyBase G26878.1 GTACAATCGAAAATTGGGGATTAATTGTACTTGATTAAAGTGAGTTTTATATAC 21 8972171 0.980609178 6 20 182 1 1.447158031 0.464285714 0.238095238 0.428571429 21 0 0 28 3L:8972143-8972196 6 21 2458 FBgn0086706 1403.55 77.59666667 118.19 0.01496206 0.270630182 0.177680007 1 1 1 0.15 dme-miR-190-5p 6mer3-8 ACATAT 3L 8991030 8991035 - 3L_8991030_8991035_- 0.996921208 0.999991154 0.998456181 0.002170818 smg FBtr0076550|FBtr0076551|FBtr0076549|FBtr0290103|FBtr0290104 8990315|8990315|8990315|8990315|8990315 8991495|8991495|8991495|8992080|8991495 3L - 8991009 8991048 3'utr smg FlyBase G35549.1 GAGAATCGGAACCACATATTGTATTTTGCATATTTAAGCG 7 8991032 0.983461999 2 6 50 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 3L:8991009-8991048 6 smg FBtr0290104|FBtr0076549|FBtr0290103|FBtr0076550|FBtr0076551 8990315|8990315|8990315|8990315|8990315 8991495|8991495|8992080|8991495|8991495 ACATAT 6mer3-8 dme-miR-190-5p 3L - 8991004 8991054 3'utr smg FlyBase G26896.1 GTGTTTGAGAATCGGAACCACATATTGTATTTTGCATATTTAAGCGTAAGC 6 8991031 0.976975838 3 5 43 1 1.113943352 0.461538462 0.666666667 0.846153846 6 0 0 13 3L:8991004-8991054 6 5 2459 FBgn0016070 840.7666667 21.58333333 33.01666667 0.005946953 0.231660232 0.151438667 -3 -4 -3.5 0.15 dme-miR-932-5p 8mer-A1 GGAATTGA 3L 8991290 8991297 - 3L_8991290_8991297_- 0.541936017 0.674981794 0.608458905 0.094077587 smg FBtr0076550|FBtr0076551|FBtr0076549|FBtr0290103|FBtr0290104 8990315|8990315|8990315|8990315|8990315 8991495|8991495|8991495|8992080|8991495 3L - 8991255 8991320 3'utr smg FlyBase G35552.1 AAGGAAGAAAGCTGGATGGAGAGGGAATTGAAAAGTGAGAATTGAGAAACGAGAGCTGATAATTGT 18 8991293 0.867540953 7 16 63 0.909090909 1 0.045454545 0.166666667 0.318181818 18 1 1 20 3L:8991255-8991320 8 smg FBtr0290104|FBtr0076549|FBtr0290103|FBtr0076550|FBtr0076551 8990315|8990315|8990315|8990315|8990315 8991495|8991495|8992080|8991495|8991495 GGAATTGA 8mer-A1 dme-miR-932-5p 3L - 8991278 8991320 3'utr smg FlyBase G26899.1 AAGGAAGAAAGCTGGATGGAGAGGGAATTGAAAAGTGAGAATT 6 8991293 0.856498459 3 6 16 1 1.113943352 0 0.666666667 0.846153846 6 0 0 13 3L:8991278-8991320 8 10 2460 FBgn0016070 840.7666667 21.58333333 33.01666667 0.011893906 0.463320463 0.302877335 -4 -4 -4 0.15 dme-miR-14-3p 7mer-A1 AGACTGA 3L 8991353 8991359 - 3L_8991353_8991359_- 0.818008892 0.819102926 0.818555909 0.000773575 smg FBtr0076550|FBtr0076551|FBtr0076549|FBtr0290103|FBtr0290104 8990315|8990315|8990315|8990315|8990315 8991495|8991495|8991495|8992080|8991495 3L - 8991331 8991386 3'utr smg FlyBase G35553.1 TAAAATGAACTCTGCATCGTGACCATGAGACTGACTAAGATTACTTTTCGCAACTA 934 8991361 0.948247331 10 919 6276 0.98394712 2.540746464 0.271010387 0.124197002 0.227573182 934 15 2 1042 3L:8991331-8991386 7 smg FBtr0290104|FBtr0076549|FBtr0290103|FBtr0076550|FBtr0076551 8990315|8990315|8990315|8990315|8990315 8991495|8991495|8992080|8991495|8991495 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 8991332 8991384 3'utr smg FlyBase G26900.1 AAATGAACTCTGCATCGTGACCATGAGACTGACTAAGATTACTTTTCGCAACT 481 8991361 0.932388816 7 466 3020 0.973262032 2.862131379 0.279411765 0.376299376 0.598930481 481 20 0 728 3L:8991332-8991384 7 702.5 2461 FBgn0016070 840.7666667 21.58333333 33.01666667 0.835546921 32.54826255 21.27713276 2 2 2 0.15 dme-miR-1008-3p 8mer-A1 AGCTGTGA 3L 9002317 9002324 + 3L_9002317_9002324_+ 0.523914382 0.468831523 0.496372953 0.038949492 CG5087 FBtr0076520|FBtr0333908 9002128|9002128 9002566|9002566 3L + 9002293 9002344 3'utr CG5087 FlyBase G28992.1 ATTAAGAAGTAAACATAAACGTATAGCTGTGATAAAACTATAATAAACTAAC 156 9002316 0.768287288 6 145 932 0.932960894 1.921686475 0.005586592 0.128205128 0.240223464 156 11 1 167 3L:9002293-9002344 8 CG5087 FBtr0076520|FBtr0333908 9002128|9002128 9002566|9002566 AGCTGTGA 8mer-A1 dme-miR-1008-3p 3L + 9002296 9002342 3'utr CG5087 FlyBase G21949.1 AAGAAGTAAACATAAACGTATAGCTGTGATAAAACTATAATAAACTA 90 9002316 0.721167928 8 79 520 0.893129771 1.591064607 0.007633588 0.322222222 0.534351145 90 12 2 117 3L:9002296-9002342 8 123 2462 FBgn0035953 365.8866667 11.12666667 17.00666667 0.33616967 11.05452367 7.23245786 1 1 1 0.15 dme-miR-1008-3p 8mer-A1 AGCTGTGA 3L 9067849 9067856 - 3L_9067849_9067856_- 0.408439775 0.444767668 0.426603722 0.025687704 CG4911 FBtr0345351 9067193 9070515 3L - 9067834 9067884 3'utr CG4911 FlyBase G35572.1 TAAAAGTTATAAGAGCAAAAGTGAAGAAAGCTGTGATACAACAAGATCCAA 13 9067863 0.920346242 5 11 38 0.941176471 1.204119983 0.117647059 0.230769231 0.411764706 13 1 0 16 3L:9067834-9067884 8 CG4911 FBtr0345351 9067193 9070515 AGCTGTGA 8mer-A1 dme-miR-1008-3p 3L - 9067843 9067899 3'utr CG4911 FlyBase G26917.1 TATGCAAGTTATGCTTAAAAGTTATAAGAGCAAAAGTGAAGAAAGCTGTGATACAAC 10 9067853 0.957703963 4 8 39 0.733333333 0.740362689 0.066666667 0.4 0.6 10 3 1 11 3L:9067843-9067899 8 8 2463 FBgn0035959 1732.163333 43.72333333 67.07666667 0.004618502 0.182968667 0.119266511 7 -3 2 0.15 dme-miR-1008-3p 6mer2-7 GCTGTG 3L 9068853 9068858 - 3L_9068853_9068858_- 0.785907087 0.713260752 0.74958392 0.051368691 CG4911 FBtr0345351 9067193 9070515 3L - 9068830 9068885 3'utr CG4911 FlyBase G35578.1 TTATGTAACCAGACCTGTTTGTATGTGGCTGTGCATTTAATTTAAGTCTAGTACGT 55 9068860 0.848040432 5 54 615 0.983050847 1.763427994 0.084745763 0.072727273 0.13559322 55 1 0 58 3L:9068830-9068885 6 CG4911 FBtr0345351 9067193 9070515 GCTGTG 6mer2-7 dme-miR-1008-3p 3L - 9068813 9068882 3'utr CG4911 FlyBase G26920.1 TGTAACCAGACCTGTTTGTATGTGGCTGTGCATTTAATTTAAGTCTAGTACGTACCAAACACAACAACCA 43 9068860 0.991976752 6 43 474 1 1.77815125 0.066666667 0.325581395 0.516666667 43 0 0 60 3L:9068813-9068882 6 46.5 2464 FBgn0035959 1732.163333 43.72333333 67.07666667 0.026845043 1.063505375 0.693236595 2 2 2 0.15 dme-miR-92b-3p 7mer-A1 TGCAATA 3L 9069042 9069048 - 3L_9069042_9069048_- 0.782911822 0.782068119 0.782489971 0.000596586 CG4911 FBtr0345351 9067193 9070515 3L - 9069027 9069073 3'utr CG4911 FlyBase G35580.1 ATGCATGTAATCATTTTTTATGAACTGCAATAGCAAATATTATTTTT 5 9069043 0.978364312 4 5 42 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3L:9069027-9069073 7 CG4911 FBtr0345351 9067193 9070515 TGCAATA 7mer-A1 dme-miR-92b-3p 3L - 9069037 9069082 3'utr CG4911 FlyBase G26921.1 ATGTAACCAATGCATGTAATCATTTTTTATGAACTGCAATAGCAAA 5 9069054 0.984929473 4 5 35 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3L:9069037-9069082 7 3 2465 FBgn0035959 1732.163333 43.72333333 67.07666667 0.001731938 0.06861325 0.044724942 -5 6 0.5 0.15 dme-bantam-3p 7mer-A1 GATCTCA 3L 9069143 9069149 - 3L_9069143_9069149_- 0.822995475 0.822870598 0.822933036 8.83E-05 CG4911 FBtr0345351 9067193 9070515 3L - 9069108 9069178 3'utr CG4911 FlyBase G35581.1 GGGACAAGTAACAACCGCAAACAAAATGCGATCTCACAGATAACTCCTACAACTATCCAATCGACCATCTA 75 9069152 0.969327952 5 70 230 0.927710843 1.40936947 0.048192771 0.093333333 0.180722892 75 4 2 77 3L:9069108-9069178 7 CG4911 FBtr0345351 9067193 9070515 GATCTCA 7mer-A1 dme-bantam-3p 3L - 9069120 9069187 3'utr CG4911 FlyBase G26922.1 TTGGTTTCTGGGACAAGTAACAACCGCAAACAAAATGCGATCTCACAGATAACTCCTACAACTATCCA 51 9069152 0.951964142 5 44 173 0.817073171 1.826074803 0.048780488 0.450980392 0.658536585 51 15 0 67 3L:9069120-9069187 7 59.5 2466 FBgn0035959 1732.163333 43.72333333 67.07666667 0.034350109 1.360829458 0.887044675 3 3 3 0.15 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 3L 9069343 9069350 - 3L_9069343_9069350_- 0.674902761 0.674899246 0.674901003 2.55E-06 CG4911 FBtr0345351 9067193 9070515 3L - 9069327 9069372 3'utr CG4911 FlyBase G35583.1 AACAGCAACAACAACAAAAATGGTACCTGAAGATCATGCCGAGCAT 23 9069352 0.935337378 2 19 70 0.833333333 1.301029996 0.041666667 0.043478261 0.083333333 23 4 0 20 3L:9069327-9069372 8 CG4911 FBtr0345351 9067193 9070515 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3L - 9069318 9069370 3'utr CG4911 FlyBase G26924.1 CAGCAACAACAACAAAAATGGTACCTGAAGATCATGCCGAGCATTTAGAGAAC 17 9069352 0.927031509 3 14 47 0.833333333 1.301029996 0 0.411764706 0.583333333 17 4 0 20 3L:9069318-9069370 8 19 2467 FBgn0035959 1732.163333 43.72333333 67.07666667 0.010968942 0.434550583 0.283257964 2 2 2 0.15 dme-miR-283-5p 8mer-A1 TGATATTA 3L 9069700 9069707 - 3L_9069700_9069707_- 0.592192176 0.592192285 0.59219223 7.07E-08 CG4911 FBtr0345351|FBtr0331549|FBtr0076542 9067193|9069647|9069647 9070515|9070515|9070515 3L - 9069676 9069738 3'utr CG4911 FlyBase G35586.1 CGCTAAGCGCCGCCATTTGTGTAGTTTAAAGTGATATTACCAGCAACAGCAAAGCAAAATGTA 29 9069701 0.986657182 8 26 216 0.918918919 1.531478917 0.27027027 0.206896552 0.378378378 29 3 0 34 3L:9069676-9069738 8 CG4911 FBtr0076542|FBtr0345351|FBtr0331549 9069647|9067193|9069647 9070515|9070515|9070515 TGATATTA 8mer-A1 dme-miR-283-5p 3L - 9069681 9069746 3'utr CG4911 FlyBase G26926.1 TCCTCGTTCGCTAAGCGCCGCCATTTGTGTAGTTTAAAGTGATATTACCAGCAACAGCAAAGCAAA 18 9069713 0.982269566 6 17 127 0.956521739 1.342422681 0.52173913 0.222222222 0.391304348 18 1 0 22 3L:9069681-9069746 8 20 2468 FBgn0035959 1732.163333 43.72333333 67.07666667 0.011546255 0.457421667 0.298166277 -6 6 0 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 9069795 9069801 - 3L_9069795_9069801_- 0.700921259 0.677560902 0.689241081 0.016518297 CG4911 FBtr0345351|FBtr0345351|FBtr0345351|FBtr0331549|FBtr0331549|FBtr0331549|FBtr0076542|FBtr0076542|FBtr0076542 9067193|9067193|9067193|9069647|9069647|9069647|9069647|9069647|9069647 9070515|9070515|9070515|9070515|9070515|9070515|9070515|9070515|9070515 3L - 9069784 9069841 3'utr CG4911 FlyBase G35587.1 TTTGTAGTAGTGTGAATAAGTACAGAATCTGGCGCTCAATTGTGATAAACCAACAAAC 81 9069802 0.707621314 10 73 435 0.894736842 1.327358934 0.168421053 0.135802469 0.263157895 81 7 3 85 3L:9069784-9069841 7 CG4911 FBtr0076542|FBtr0076542|FBtr0076542|FBtr0345351|FBtr0345351|FBtr0345351|FBtr0331549|FBtr0331549|FBtr0331549 9069647|9069647|9069647|9067193|9067193|9067193|9069647|9069647|9069647 9070515|9070515|9070515|9070515|9070515|9070515|9070515|9070515|9070515 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 9069762 9069823 3'utr CG4911 FlyBase G26927.1 AGTACAGAATCTGGCGCTCAATTGTGATAAACCAACAAACAACAACATAAGCAAATGTAACA 57 9069802 0.973574064 5 51 308 0.898876404 1.301029996 0.191011236 0.421052632 0.629213483 57 6 3 80 3L:9069762-9069823 7 65 2469 FBgn0035959 1732.163333 43.72333333 67.07666667 0.03752533 1.486620416 0.969040402 1 1 1 0.15 dme-miR-305-5p 8mer-A1 AGTACAAA 3L 9070214 9070221 - 3L_9070214_9070221_- 0.605642907 0.605643318 0.605643113 2.83E-07 CG4911 FBtr0345351|FBtr0331549|FBtr0076542 9067193|9069647|9069647 9070515|9070515|9070515 3L - 9070152 9070253 3'utr CG4911 FlyBase G35591.1 GTAATCAAAATCGCGATTAGCCCTTGTTTATTAGTACAAAAGCGACAGATCAAGAGCGACAGGAATGTTAGGAGCAAAGCAAAAGACTTGAGCACTTCACAA 46 9070222 0.859118576 9 39 275 0.862745098 1.342422681 0.235294118 0.108695652 0.196078431 46 6 1 44 3L:9070152-9070253 8 CG4911 FBtr0076542|FBtr0345351|FBtr0331549 9069647|9067193|9069647 9070515|9070515|9070515 AGTACAAA 8mer-A1 dme-miR-305-5p 3L - 9070153 9070283 3'utr CG4911 FlyBase G26929.1 ATGTTAAATTTTCCTAATTTCTTAGCCTTTGTAATCAAAATCGCGATTAGCCCTTGTTTATTAGTACAAAAGCGACAGATCAAGAGCGACAGGAATGTTAGGAGCAAAGCAAAAGACTTGAGCACTTCACA 26 9070222 0.980559667 11 21 160 0.761904762 1.505149978 0.261904762 0.423076923 0.642857143 26 10 0 32 3L:9070153-9070283 8 24.5 2470 FBgn0035959 1732.163333 43.72333333 67.07666667 0.014144163 0.560341542 0.36525369 1 1 1 0.15 dme-miR-276a-3p 6mer3-8 AGTTCC 3L 9097232 9097237 + 3L_9097232_9097237_+ 0.666226963 0.949358908 0.807792935 0.200204486 CG13315 FBtr0076530|FBtr0340709 9097219|9097219 9097494|9097374 3L + 9097225 9097275 3'utr CG13315 FlyBase G29046.1 TAGTTTTAGTTCCGGCCTTGACATGTTCCTAATGTCGCACTAGACATACAT 77 9097234 0.73005564 8 76 572 0.989361702 1.968482949 0.138297872 0.194805195 0.340425532 77 1 0 93 3L:9097225-9097275 6 CG13315 FBtr0340709|FBtr0076530 9097219|9097219 9097374|9097494 AGTTCC 6mer3-8 dme-miR-276a-3p 3L + 9097225 9097273 3'utr CG13315 FlyBase G21984.1 TAGTTTTAGTTCCGGCCTTGACATGTTCCTAATGTCGCACTAGACATAC 47 9097234 0.716352278 9 44 369 0.918918919 1.832508913 0.22972973 0.361702128 0.594594595 47 6 0 68 3L:9097225-9097273 6 54.5 2471 FBgn0040827 102.6933333 24.86 37.96 0.53070631 2.19227675 1.435721812 -2 -2 -2 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 9097398 9097403 + 3L_9097398_9097403_+ 0.979100669 0.994523266 0.986811967 0.010905425 CG13315 FBtr0076530 9097219 9097494 3L + 9097360 9097419 3'utr CG13315 FlyBase G29047.2 AATCGAATCTAAACGAAGCTGGCGCTACGACTTTTCATGTACCTTGGCATTATATATATA 145 9097397 0.833298411 10 139 1317 0.956790123 1.713210443 0.055555556 0.110344828 0.203703704 145 5 2 155 3L:9097360-9097419 6 CG13315 FBtr0076530 9097219 9097494 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 9097360 9097418 3'utr CG13315 FlyBase G21986.1 AATCGAATCTAAACGAAGCTGGCGCTACGACTTTTCATGTACCTTGGCATTATATATAT 78 9097397 0.840911965 8 73 679 0.946153846 2.089905111 0.023076923 0.474358974 0.684615385 78 7 0 123 3L:9097360-9097418 6 103 2472 FBgn0040827 102.6933333 24.86 37.96 1.002986237 4.143201931 2.713382508 1 1 1 0.15 dme-miR-283-5p 8mer-A1 TGATATTA 3L 9348311 9348318 + 3L_9348311_9348318_+ 0.588057348 0.588027375 0.588042361 2.11E-05 PGRP-LC FBtr0308349|FBtr0089492|FBtr0346814|FBtr0089491 9348174|9347217|9348174|9348174 9348336|9348336|9348336|9348336 3L + 9348291 9348330 3'utr PGRP-LC FlyBase G29076.1 ATTCGTTTAAAAAGAAAATGTGATATTAAATAAAACAAAA 80 9348316 0.667474309 7 73 446 0.914893617 1.33243846 0 0.1375 0.265957447 80 5 3 86 3L:9348291-9348330 8 PGRP-LC FBtr0089491|FBtr0346814|FBtr0089492|FBtr0308349 9348174|9348174|9347217|9348174 9348336|9348336|9348336|9348336 TGATATTA 8mer-A1 dme-miR-283-5p 3L + 9348291 9348332 3'utr PGRP-LC FlyBase G22004.1 ATTCGTTTAAAAAGAAAATGTGATATTAAATAAAACAAAATG 58 9348316 0.658098571 6 53 335 0.91954023 1.425968732 0.011494253 0.362068966 0.574712644 58 5 2 80 3L:9348291-9348332 8 68.5 2473 FBgn0035976 208.34 13.13 20.06 0.328789479 5.217060168 3.414755733 -5 -5 -5 0.15 dme-miR-92b-3p 6mer3-8 GTGCAA 3L 9359565 9359570 + 3L_9359565_9359570_+ 0.99975147 0.999851263 0.999801366 7.06E-05 CG32039 FBtr0345605|FBtr0076441 9359489|9359489 9359996|9359747 3L + 9359541 9359602 3'utr CG32039 FlyBase G29083.1 GTTCCCACATCTTTACTGACTTTTGTGCAAAGTTTTTGTACTACTCCGTATTTGTATTTGTA 34 9359563 0.740841541 8 33 377 0.973684211 1.568201724 0.184210526 0.117647059 0.210526316 34 1 0 37 3L:9359541-9359602 6 CG32039 FBtr0076441|FBtr0345605 9359489|9359489 9359747|9359996 GTGCAA 6mer3-8 dme-miR-92b-3p 3L + 9359534 9359603 3'utr CG32039 FlyBase G22012.1 CAAATTTGTTCCCACATCTTTACTGACTTTTGTGCAAAGTTTTTGTACTACTCCGTATTTGTATTTGTAT 23 9359563 0.991557721 6 23 252 1 1.505149978 0.125 0.304347826 0.5 23 0 0 32 3L:9359534-9359603 6 23 2474 FBgn0052039 133.9666667 27.61666667 42.45333333 0.171684499 0.832830416 0.541771357 2 2 2 0.15 dme-miR-1008-3p 6mer3-8 AGCTGT 3L 9382624 9382629 + 3L_9382624_9382629_+ 0.999954876 0.562800062 0.781377469 0.309115124 Hsp23 FBtr0076453|FBtr0309504 9382557|9382557 9382730|9382765 3L + 9382573 9382680 3'utr Hsp23 FlyBase G29101.1 GAGATGCCCTGCATTATTTAACCATTATCAAAGTCATACATCTGTTTTATAAGCTGTAGTTATCCAAGGACACTTCACTCATACACAATAGCCATTAAGGGTGTCCTG 53 9382612 0.993966182 12 38 494 0.738461538 1.079181246 0.2 0.188679245 0.338461538 53 14 3 48 3L:9382573-9382680 6 Hsp23 FBtr0309504|FBtr0076453 9382557|9382557 9382765|9382730 AGCTGT 6mer3-8 dme-miR-1008-3p 3L + 9382589 9382660 3'utr Hsp23 FlyBase G22027.1 TTTAACCATTATCAAAGTCATACATCTGTTTTATAAGCTGTAGTTATCCAAGGACACTTCACTCATACACAA 25 9382653 0.993106824 8 19 229 0.8 1.146128036 0.171428571 0.32 0.514285714 25 6 1 28 3L:9382589-9382660 6 24 2475 FBgn0001224 279.6666667 39.84 60.63333333 0.085816448 0.602409639 0.39582188 12 -29 -8.5 0.15 dme-miR-308-3p 8mer-m1 CTGTGATT 3L 9387233 9387240 - 3L_9387233_9387240_- 0.384948745 0.385002485 0.384975615 3.80E-05 CG4080 FBtr0309506 9386825 9387784 3L - 9387145 9387359 3'utr CG4080 FlyBase G35644.1 ACTAAGTTGTCCATGCCAAAAAGCCCAAAAACCAACCAGAGACGGTAATTATTTAGTCCATGTGTAGGATGTGTTTTGTTTCTTAACTTCTAAGTCAAATGAAATTTTAAAAAATTGATCTGTGATTAAGCGTCATTGAATATACATACATAACGTGCATAAATGCAAGCAAAAACATATTGACAGCAGCCGCAGCCGTAGAAAATGCAGAAAAA 153 9387241 0.979650894 20 149 1026 0.973958333 2.271841607 0.052083333 0.215686275 0.375 153 5 0 187 3L:9387145-9387359 8 CG4080 FBtr0309506 9386825 9387784 CTGTGATT 8mer-m1 dme-miR-308-3p 3L - 9387185 9387255 3'utr CG4080 FlyBase G26958.1 TTTTAAAAAATTGATCTGTGATTAAGCGTCATTGAATATACATACATAACGTGCATAAATGCAAGCAAAAA 70 9387241 0.840737221 10 68 476 0.981481481 1.72427587 0.018518519 0.4 0.611111111 70 1 1 106 3L:9387185-9387255 8 84.5 2476 FBgn0035983 376.7 13.10666667 19.99333333 0.224316432 6.447100712 4.226408803 1 1 1 0.15 dme-bantam-3p 6mer3-8 TGATCT 3L 9387739 9387744 - 3L_9387739_9387744_- 0.999014376 0.999126307 0.999070342 7.91E-05 CG4080 FBtr0309506 9386825 9387784 3L - 9387660 9387784 3'utr CG4080 FlyBase G35646.1 AATGGAGTATCCTGCCCAACTGATCTGATGTGATCCACTATGATCTGCGCGCTCTTTCTCCCCCCAATAAGCTCTGCTCTCTCAAGTATTCACCGCTGGTCGACGGAGACCCCGAGATCCACATA 95 9387726 0.980145537 20 89 626 0.948717949 1.744292983 0.213675214 0.178947368 0.333333333 95 5 1 111 3L:9387660-9387784 6 CG4080 FBtr0076494|FBtr0309506 9387507|9386825 9387784|9387784 TGATCT 6mer3-8 dme-bantam-3p 3L - 9387670 9387788 stop_codon CG4080 FlyBase G26961.1 GTGAAATGGAGTATCCTGCCCAACTGATCTGATGTGATCCACTATGATCTGCGCGCTCTTTCTCCCCCCAATAAGCTCTGCTCTCTCAAGTATTCACCGCTGGTCGACGGAGACCCCGA 76 9387727 0.977708638 15 70 489 0.922330097 1.67669361 0.174757282 0.289473684 0.475728155 76 7 1 95 3L:9387670-9387788 6 42.5 2477 FBgn0035983 376.7 13.10666667 19.99333333 0.112821874 3.242624619 2.12570857 -18 -17 -17.5 0.15 dme-bantam-3p 7mer-m8 TGATCTC 3L 9407489 9407495 - 3L_9407489_9407495_- 0.645092796 0.644238991 0.644665893 0.000603728 CG4022 FBtr0309089 9406177 9408212 3L - 9407467 9407567 3'utr CG4022 FlyBase G35671.2 ATATCCATATCCATATCCGTGCAAAAGTATTAAGAAACTTCGCAGATCCAAGAACCCTAACCCTGGATCGATTGATCTCCACGCTTTGAAGTTGAGGGGCA 285 9407496 0.984614598 8 271 2191 0.956140351 2.037426498 0.064327485 0.161403509 0.301169591 285 13 2 327 3L:9407467-9407567 7 CG4022 FBtr0309089 9406177 9408212 TGATCTC 7mer-m8 dme-bantam-3p 3L - 9407459 9407550 3'utr CG4022 FlyBase G26976.1 CGTGCAAAAGTATTAAGAAACTTCGCAGATCCAAGAACCCTAACCCTGGATCGATTGATCTCCACGCTTTGAAGTTGAGGGGCAGTGAAAAC 155 9407496 0.976225355 11 146 1116 0.931623932 2.338456494 0.068376068 0.367741935 0.581196581 155 16 0 218 3L:9407459-9407550 7 199.5 2478 FBgn0035986 448.2433333 14.32333333 21.92 0.445070758 13.92832209 9.101277372 1 1 1 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3L 9412348 9412354 + 3L_9412348_9412354_+ 0.652942791 0.651883812 0.652413302 0.000748826 CG3689 FBtr0076456 9412188 9413637 3L + 9412306 9412378 3'utr CG3689 FlyBase G29117.1 ATCGCAAAAGCTGGCGCAGGCGACTCCTTAGTTAGTTTTGATTCTAGTCCAATTGTACAACATGTCGAAAATC 82 9412347 0.975292757 6 79 809 0.972222222 2.021189299 0.5 0.256097561 0.435185185 82 3 0 105 3L:9412306-9412378 7 CG3689 FBtr0076456 9412188 9413637 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 9412317 9412421 3'utr CG3689 FlyBase G22034.1 TGGCGCAGGCGACTCCTTAGTTAGTTTTGATTCTAGTCCAATTGTACAACATGTCGAAAATCAAATTCAAATTGTATTTTTGCTCAGGACTGAGTGTTGGCATAT 68 9412347 0.970091217 10 65 662 0.979591837 1.982271233 0.428571429 0.382352941 0.571428571 68 2 0 96 3L:9412317-9412421 7 68.5 2479 FBgn0035987 792 73.75 112.5233333 0.086489899 0.928813559 0.608762627 1 1 1 0.15 dme-miR-1003-3p 7mer-A1 TGTGAGA 3L 9412500 9412506 + 3L_9412500_9412506_+ 0.663959048 0.70760195 0.685780499 0.030860261 CG3689 FBtr0076456 9412188 9413637 3L + 9412447 9412523 3'utr CG3689 FlyBase G29119.1 TCGAAATTCAAAGATTGTTCTTGTACTTAATTTTGTAAATATGTCGACATACTTGTGAGACTGAGCGCAGCAATGTT 85 9412501 0.965089625 8 80 584 0.946808511 1.949390007 0.308510638 0.094117647 0.180851064 85 5 0 89 3L:9412447-9412523 7 CG3689 FBtr0076456 9412188 9413637 TGTGAGA 7mer-A1 dme-miR-1003-3p 3L + 9412449 9412533 3'utr CG3689 FlyBase G22035.1 GAAATTCAAAGATTGTTCTTGTACTTAATTTTGTAAATATGTCGACATACTTGTGAGACTGAGCGCAGCAATGTTATCCTTCTAT 57 9412501 0.872860357 8 49 409 0.821917808 1.301029996 0.328767123 0.228070175 0.397260274 57 11 2 60 3L:9412449-9412533 7 58.5 2480 FBgn0035987 792 73.75 112.5233333 0.073863636 0.793220339 0.519892171 -1 -1 -1 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3L 9414949 9414955 - 3L_9414949_9414955_- 0.521194462 0.521207436 0.521200949 9.12E-06 CG3967 FBtr0076480|FBtr0331584 9414836|9414836 9415286|9415286 3L - 9414915 9414974 3'utr CG3967 FlyBase G35677.1 ACGAAAATACCTGACAAATTGTGATTACAACATATATAACTTATCATTTAACATTTAACT 35 9414956 0.975144011 4 34 216 0.97826087 1.653212514 0.065217391 0.228571429 0.413043478 35 1 0 45 3L:9414915-9414974 7 CG3967 FBtr0076480|FBtr0331584 9414836|9414836 9415286|9415286 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 9414934 9414973 3'utr CG3967 FlyBase G26981.1 CGAAAATACCTGACAAATTGTGATTACAACATATATAACT 23 9414956 0.681656845 3 23 126 1 1.491361694 0.032258065 0.347826087 0.516129032 23 0 0 31 3L:9414934-9414973 7 28.5 2481 FBgn0035989 353.1 23.02 35.35666667 0.080713679 1.238053866 0.806071462 1 1 1 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 3L 9415180 9415186 - 3L_9415180_9415186_- 0.766511366 0.762387253 0.76444931 0.002916179 CG3967 FBtr0076480|FBtr0331584 9414836|9414836 9415286|9415286 3L - 9415175 9415225 3'utr CG3967 FlyBase G35678.1 CGACACTAGATAAACTGATATATCAACTAAATAACCATTGTACAAAGCTTT 8 9415188 0.971316898 4 7 43 0.833333333 1 0 0.375 0.583333333 8 2 0 10 3L:9415175-9415225 7 CG3967 FBtr0076480|FBtr0331584 9414836|9414836 9415286|9415286 GTACAAA 7mer-A1 dme-miR-305-5p 3L - 9415148 9415197 3'utr CG3967 FlyBase G26982.1 AAATAACCATTGTACAAAGCTTTGATTTTAGCCAATTATTTATATTTTCG 11 9415188 0.973106305 3 11 73 1 1.204119983 0 0.272727273 0.5 11 0 0 16 3L:9415148-9415197 7 8.5 2482 FBgn0035989 353.1 23.02 35.35666667 0.024072501 0.369244136 0.240407278 2 2 2 0.15 dme-miR-8-3p 6mer2-7 AGTATT 3L 9424401 9424406 + 3L_9424401_9424406_+ 0.999535068 0.999661545 0.999598306 8.94E-05 aay FBtr0076457 9424361 9424781 3L + 9424371 9424438 3'utr aay FlyBase G29129.1 TACGTAAGGCGGTGGGGGAGTGGCGAATTTAGTATTTGAAATCAACGTGTTATAGCTCGTAGTGATGC 14 9424407 0.973040404 7 12 101 0.9375 0.875061263 0.25 0.142857143 0.25 14 0 1 15 3L:9424371-9424438 6 aay FBtr0076457 9424361 9424781 AGTATT 6mer2-7 dme-miR-8-3p 3L + 9424370 9424454 3'utr aay FlyBase G22041.1 ATACGTAAGGCGGTGGGGGAGTGGCGAATTTAGTATTTGAAATCAACGTGTTATAGCTCGTAGTGATGCACATGTTTATGCCCAA 16 9424409 0.979943091 7 14 102 0.869565217 1.301029996 0.52173913 0.375 0.565217391 16 3 0 20 3L:9424370-9424454 6 7.5 2483 FBgn0023129 178.6666667 14.14 21.50666667 0.041977612 0.530410184 0.348729076 -6 -8 -7 0.15 dme-miR-8-3p 7mer-m8 CAGTATT 3L 9428632 9428638 + 3L_9428632_9428638_+ 0.661586757 0.649937412 0.655762085 0.00823737 Shc FBtr0076458 9428433 9428671 3L + 9428612 9428673 3'utr Shc FlyBase G29140.1 TACAAATATGTGCATGTCTACAGTATTTTCCATTCGAATGCGAATAAAGATGATAAACGGAA 21 9428639 0.991320174 5 19 195 0.916666667 1.342422681 0.208333333 0.142857143 0.25 21 2 0 22 3L:9428612-9428673 7 Shc FBtr0076458 9428433 9428671 CAGTATT 7mer-m8 dme-miR-8-3p 3L + 9428615 9428658 3'utr Shc FlyBase G22052.1 AAATATGTGCATGTCTACAGTATTTTCCATTCGAATGCGAATAA 22 9428639 0.693836988 4 20 193 0.911764706 1.491361694 0.205882353 0.409090909 0.617647059 22 3 0 31 3L:9428615-9428658 7 20 2484 FBgn0015296 548 41.97 64.36666667 0.03649635 0.476530855 0.310719834 -7 -7 -7 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 9438111 9438116 + 3L_9438111_9438116_+ 0.73051813 0.730804362 0.730661246 0.000202445 MTF-1 FBtr0113323|FBtr0113323|FBtr0113323|FBtr0344237|FBtr0344237|FBtr0344237|FBtr0113324|FBtr0113324|FBtr0113324|FBtr0113322|FBtr0113322|FBtr0113322|FBtr0076459|FBtr0076459|FBtr0076459|FBtr0076460|FBtr0076460|FBtr0076460 9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921 9438711|9438711|9438711|9438711|9438711|9438711|9438704|9438704|9438704|9438711|9438711|9438711|9438711|9438711|9438711|9438711|9438711|9438711 3L + 9438067 9438156 3'utr MTF-1 FlyBase G29149.1 ACAAAAAATATCAAAGTGCATTTAAGTGAAACGATTCAATCATATGTGATCCCAGCGGAGGCTGGCCGCGCTATCCCAAAACCTACTATA 83 9438109 0.876780308 15 61 459 0.739130435 1.355387658 0.195652174 0.096385542 0.184782609 83 22 2 68 3L:9438067-9438156 6 MTF-1 FBtr0076460|FBtr0076460|FBtr0076460|FBtr0076459|FBtr0076459|FBtr0076459|FBtr0113322|FBtr0113322|FBtr0113322|FBtr0113324|FBtr0113324|FBtr0113324|FBtr0344237|FBtr0344237|FBtr0344237|FBtr0113323|FBtr0113323|FBtr0113323 9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921 9438711|9438711|9438711|9438711|9438711|9438711|9438711|9438711|9438711|9438704|9438704|9438704|9438711|9438711|9438711|9438711|9438711|9438711 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 9438070 9438155 3'utr MTF-1 FlyBase G22058.1 AAAAATATCAAAGTGCATTTAAGTGAAACGATTCAATCATATGTGATCCCAGCGGAGGCTGGCCGCGCTATCCCAAAACCTACTAT 64 9438110 0.785474249 13 44 323 0.673076923 1.544068044 0.240384615 0.40625 0.634615385 64 33 1 70 3L:9438070-9438155 6 62 2485 FBgn0040305 420.6966667 14.72 22.57 0.147374593 4.211956522 2.747009304 2 1 1.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 9452519 9452524 + 3L_9452519_9452524_+ 0.936035093 0.965869107 0.9509521 0.021095824 ghi FBtr0076462 9452442 9452790 3L + 9452451 9452543 3'utr ghi FlyBase G29163.1 ATCAGACCATGCCCAGACCAATCGTGTGTACTGTTCTCCGTTCCAATATCCAAAATAGCCGCGTATCTGTACCTCGCCGCGATGCTTTATCTA 78 9452518 0.974159938 8 74 454 0.96 1.681241237 0.25 0.230769231 0.4 78 3 1 96 3L:9452451-9452543 6 ghi FBtr0076462 9452442 9452790 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 9452502 9452542 3'utr ghi FlyBase G22069.1 AAAATAGCCGCGTATCTGTACCTCGCCGCGATGCTTTATCT 56 9452518 0.686048634 6 55 295 0.987654321 1.903089987 0.296296296 0.357142857 0.555555556 56 1 0 80 3L:9452502-9452542 6 60 2486 FBgn0266124 200.3333333 37.04333333 56.53333333 0.299500832 1.619724647 1.061320755 1 1 1 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3L 9452604 9452610 + 3L_9452604_9452610_+ 0.666875592 0.820869605 0.743872598 0.108890202 ghi FBtr0076462 9452442 9452790 3L + 9452557 9452633 3'utr ghi FlyBase G29164.1 TATACACCGCAATCAATGAATGGAACGTAGCTGTAGGCGACACATGTCCAAAGAGGCGATCTAATCGCTTGCTGATC 10 9452574 0.938015005 6 10 41 1 1.041392685 0.363636364 0.1 0.181818182 10 0 0 11 3L:9452557-9452633 7 ghi FBtr0076462 9452442 9452790 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 9452572 9452620 3'utr ghi FlyBase G22070.1 ATGAATGGAACGTAGCTGTAGGCGACACATGTCCAAAGAGGCGATCTAA 7 9452601 0.923469352 4 6 21 1 1.113943352 0.307692308 0.714285714 0.846153846 7 0 0 13 3L:9452572-9452620 7 5 2487 FBgn0266124 200.3333333 37.04333333 56.53333333 0.024958403 0.134977054 0.088443396 30 3 16.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 9452758 9452763 + 3L_9452758_9452763_+ 0.906208446 0.944438764 0.925323605 0.027032975 ghi FBtr0076462|FBtr0076462|FBtr0076462 9452442|9452442|9452442 9452790|9452790|9452790 3L + 9452731 9452778 3'utr ghi FlyBase G29166.1 AATAAATCTAACGCTTACACAATCGCACTGTGAAATAGTTAAAAAAAG 17 9452766 0.711981419 5 14 86 0.884615385 1.361727836 0.192307692 0.352941176 0.576923077 17 3 0 23 3L:9452731-9452778 6 ghi FBtr0076462|FBtr0076462|FBtr0076462 9452442|9452442|9452442 9452790|9452790|9452790 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 9452637 9452774 3'utr ghi FlyBase G22071.1 ATCTGAAGTGGACAACACCCGGCGACTGTCCATCAATAGCTGCCTCACCGTTTAATGTAGTTATCTAGCAGTAGTTACAAGTTTAAAGTCAGTTAATAAATCTAACGCTTACACAATCGCACTGTGAAATAGTTAAAA 22 9452766 0.93214717 12 19 129 0.909090909 1.477121255 0.121212121 0.409090909 0.606060606 22 3 0 30 3L:9452637-9452774 6 12 2488 FBgn0266124 200.3333333 37.04333333 56.53333333 0.059900166 0.323944929 0.212264151 -8 -8 -8 0.15 dme-bantam-3p 6mer3-8 TGATCT 3L 9453120 9453125 - 3L_9453120_9453125_- 0.999596529 0.999665795 0.999631162 4.90E-05 phol FBtr0076475|FBtr0345600 9453046|9452801 9453529|9453529 3L - 9453086 9453238 3'utr phol FlyBase G35697.1 AGTTCTAAGAGTTTAGCTTGTACCGTAGGCTAAGTGAGTCCCCCCGCAAAACCAAAACTGAACCGTAATCCCCGAAGAACTCAGCCAAACTGTCACCTTAAAAAGCCCCAATTTGATCTGATACTAATCGTGTGCGATCTTCGCTCGAATAAC 163 9453126 0.970284628 14 157 899 0.971014493 1.826074803 0.004830918 0.226993865 0.391304348 163 4 2 201 3L:9453086-9453238 6 phol FBtr0076475|FBtr0345600 9453046|9452801 9453529|9453529 TGATCT 6mer3-8 dme-bantam-3p 3L - 9453103 9453143 3'utr phol FlyBase G26995.1 CCTTAAAAAGCCCCAATTTGATCTGATACTAATCGTGTGCG 100 9453126 0.961073316 6 98 546 0.980645161 2.181843588 0.012903226 0.38 0.6 100 3 0 152 3L:9453103-9453143 6 121.5 2489 FBgn0035997 881.8933333 31.6 48.47 0.137771764 3.844936709 2.506705178 1 1 1 0.15 dme-miR-283-5p 7mer-m1 GATATTT 3L 9475735 9475741 - 3L_9475735_9475741_- 0.721421671 0.73412008 0.727770875 0.008979125 Uch-L5 FBtr0076472 9475491 9475793 3L - 9475723 9475810 stop_codon Uch-L5 FlyBase G35723.1 AAAAGGATACCGACTAAGCATTTACAGTATATATTTAAAATTTCCCGTTGGACAATTTAAAATTGCTGCGATATTTGAAATAAAAGAA 74 9475748 0.909836493 12 70 665 0.941860465 1.908485019 0.069767442 0.162162162 0.279069767 74 5 0 81 3L:9475723-9475810 7 Uch-L5 FBtr0076472 9475491 9475793 GATATTT 7mer-m1 dme-miR-283-5p 3L - 9475721 9475795 stop_codon Uch-L5 FlyBase G27011.1 AAGCATTTACAGTATATATTTAAAATTTCCCGTTGGACAATTTAAAATTGCTGCGATATTTGAAATAAAAGAAAA 47 9475748 0.990377203 7 42 443 0.911764706 1.315270435 0.058823529 0.361702128 0.558823529 47 4 2 62 3L:9475721-9475795 7 55.5 2490 FBgn0011327 635.3333333 61.73666667 94.22333333 0.087355719 0.898979537 0.589026073 7 7 7 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3L 9485714 9485720 + 3L_9485714_9485720_+ 0.443106061 0.443131017 0.443118539 1.76E-05 Jarid2 FBtr0076468 9485591 9486530 3L + 9485696 9485767 3'utr Jarid2 FlyBase G29207.1 AAGAAATGTGTATACCTATGTGATTCGCCATCGCTAGTGAGCAGATAATTGATAATTGGGTGAAATATAGAA 41 9485720 0.735398812 9 40 294 0.981481481 1.72427587 0.148148148 0.219512195 0.407407407 41 1 0 53 3L:9485696-9485767 7 Jarid2 FBtr0076468 9485591 9486530 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 9485700 9485740 3'utr Jarid2 FlyBase G22094.1 AATGTGTATACCTATGTGATTCGCCATCGCTAGTGAGCAGA 25 9485719 0.861979896 6 24 168 0.96875 1.491361694 0.1875 0.2 0.375 25 1 0 31 3L:9485700-9485740 7 29.5 2491 FBgn0036004 1195.756667 17.17 26.52666667 0.024670571 1.718112988 1.112088464 -6 -5 -5.5 0.15 dme-miR-1012-3p 8mer-A1 TTGACTAA 3L 9485831 9485838 + 3L_9485831_9485838_+ 0.542939628 0.413260772 0.4781002 0.091696759 Jarid2 FBtr0076468 9485591 9486530 3L + 9485794 9485868 3'utr Jarid2 FlyBase G29208.1 ACAAAACACACATATTAATGCAACGTTTATCTCCCAGTTGACTAACTGACACTATTACTAACTGTAAGATAAGAG 16 9485831 0.962604106 8 15 102 0.954545455 1.021189299 0.318181818 0.3125 0.5 16 0 1 21 3L:9485794-9485868 8 Jarid2 FBtr0076468 9485591 9486530 TTGACTAA 8mer-A1 dme-miR-1012-3p 3L + 9485760 9485853 3'utr Jarid2 FlyBase G22095.1 ATATAGAAATGTCTACGAGTTAATCCATGGACACACAAAACACACATATTAATGCAACGTTTATCTCCCAGTTGACTAACTGACACTATTACTA 19 9485808 0.995888613 7 17 109 0.913043478 1.021189299 0 0.210526316 0.347826087 19 1 1 21 3L:9485760-9485853 8 9 2492 FBgn0036004 1195.756667 17.17 26.52666667 0.007526615 0.524170064 0.339281226 0 23 11.5 0.15 dme-miR-33-5p 6mer3-8 CAATGC 3L 9485916 9485921 + 3L_9485916_9485921_+ 0.466311072 0.971976541 0.719143807 0.357559433 Jarid2 FBtr0076468 9485591 9486530 3L + 9485870 9485941 3'utr Jarid2 FlyBase G29209.1 GTAGGATCGGATATAGAGAGATGTAACTGTTCATATTTCAACGTGGCAATGCTTTCAATTTTGACTAGTTTA 25 9485899 0.742998261 6 25 190 1 1.462397998 0.137931034 0.16 0.275862069 25 0 0 29 3L:9485870-9485941 6 Jarid2 FBtr0076468 9485591 9486530 CAATGC 6mer3-8 dme-miR-33-5p 3L + 9485872 9485935 3'utr Jarid2 FlyBase G22096.1 AGGATCGGATATAGAGAGATGTAACTGTTCATATTTCAACGTGGCAATGCTTTCAATTTTGACT 17 9485891 0.825177105 6 17 127 1 1.414973348 0 0.352941176 0.576923077 17 0 0 26 3L:9485872-9485935 6 5 2493 FBgn0036004 1195.756667 17.17 26.52666667 0.004181453 0.291205591 0.18848957 17 25 21 0.15 dme-miR-79-3p 7mer-m8 TAGCTTT 3L 9486099 9486105 + 3L_9486099_9486105_+ 0.547834456 0.614404516 0.581119486 0.047072098 Jarid2 FBtr0076468 9485591 9486530 3L + 9486056 9486179 3'utr Jarid2 FlyBase G29210.1 TATTGTATATAGAGAGCCTTAGTGTATGTACGTACTACGTAGTTAGCTTTCGAATTAAGTCAAAGACCCTCAAAGAAACCATGCTAACGTGTTGCAATTTCTACTACCTTTTATACGCTAAGAT 26 9486076 0.988620572 15 24 224 0.965517241 1.447158031 0.103448276 0.076923077 0.172413793 26 1 0 28 3L:9486056-9486179 7 Jarid2 FBtr0076468 9485591 9486530 TAGCTTT 7mer-m8 dme-miR-79-3p 3L + 9486061 9486115 3'utr Jarid2 FlyBase G22097.1 TATATAGAGAGCCTTAGTGTATGTACGTACTACGTAGTTAGCTTTCGAATTAAGT 11 9486074 0.986847544 6 10 95 0.928571429 1.113943352 0.142857143 0.272727273 0.428571429 11 1 0 13 3L:9486061-9486115 7 8.5 2494 FBgn0036004 1195.756667 17.17 26.52666667 0.00710847 0.495049505 0.320432269 23 25 24 0.15 dme-miR-965-3p 6mer3-8 TACGCT 3L 9486169 9486174 + 3L_9486169_9486174_+ 0.993843093 0.994732079 0.994287586 0.000628618 Jarid2 FBtr0076468 9485591 9486530 3L + 9486056 9486179 3'utr Jarid2 FlyBase G29210.1 TATTGTATATAGAGAGCCTTAGTGTATGTACGTACTACGTAGTTAGCTTTCGAATTAAGTCAAAGACCCTCAAAGAAACCATGCTAACGTGTTGCAATTTCTACTACCTTTTATACGCTAAGAT 26 9486166 0.988620572 15 24 224 0.965517241 1.447158031 0.103448276 0.076923077 0.172413793 26 1 0 28 3L:9486056-9486179 6 Jarid2 FBtr0076468 9485591 9486530 TACGCT 6mer3-8 dme-miR-965-3p 3L + 9486144 9486170 3'utr Jarid2 FlyBase G22098.1 GTGTTGCAATTTCTACTACCTTTTATA 6 9486166 0.677102956 2 6 59 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3L:9486144-9486170 2 5.5 2495 FBgn0036004 1195.756667 17.17 26.52666667 0.004599598 0.32032615 0.207338527 3 3 3 0.15 dme-miR-307a-3p 7mer-A1 GTTGTGA 3L 9486340 9486346 + 3L_9486340_9486346_+ 0.607065206 0.750553525 0.678809365 0.10146155 Jarid2 FBtr0076468 9485591 9486530 3L + 9486311 9486382 3'utr Jarid2 FlyBase G29211.1 GAAAGCCAGAGTTACTATCGCTGACTGAAGTTGTGAGGCGGGACAACCCAAGACGTACTGTTCATTCAACCA 7 9486342 0.93294359 5 7 29 1 0.903089987 0.5 0.142857143 0.25 7 0 0 8 3L:9486311-9486382 7 Jarid2 FBtr0076468 9485591 9486530 GTTGTGA 7mer-A1 dme-miR-307a-3p 3L + 9486317 9486362 3'utr Jarid2 FlyBase G22099.1 CAGAGTTACTATCGCTGACTGAAGTTGTGAGGCGGGACAACCCAAG 11 9486344 0.973219582 5 9 56 0.928571429 1.113943352 0.285714286 0.272727273 0.428571429 11 1 0 13 3L:9486317-9486362 7 8 2496 FBgn0036004 1195.756667 17.17 26.52666667 0.006690324 0.465928946 0.301583312 -2 -4 -3 0.15 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3L 9486489 9486495 - 3L_9486489_9486495_- 0.808811892 0.808804401 0.808808147 5.30E-06 pall FBtr0076471|FBtr0076471 9486446|9486446 9486622|9486622 3L - 9486448 9486554 3'utr pall FlyBase G35731.1 AGCATTAATTAGGCAGTGCATCTTCGATATATCGCGTTAAGATTTATTGTTGCACTTGTTACTTAAATATTGTATTACTACTATATAAATACATTGAACATCTAGTG 12 9486498 0.99437503 7 11 120 0.916666667 0.740362689 0.083333333 0 0 12 0 1 11 3L:9486448-9486554 7 pall FBtr0076471|FBtr0076471 9486446|9486446 9486622|9486622 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3L - 9486465 9486509 3'utr pall FlyBase G27015.1 ATTGTTGCACTTGTTACTTAAATATTGTATTACTACTATATAAAT 8 9486485 0.787775698 5 8 95 1 1.041392685 0 0.375 0.545454545 8 0 0 11 3L:9486465-9486509 7 7.5 2497 FBgn0036005 105.5133333 10.81333333 16.61 0.071081064 0.693588163 0.45153522 3 -10 -3.5 0.15 dme-miR-932-5p 6mer2-7 GAATTG 3L 9494988 9494993 - 3L_9494988_9494993_- 0.999732024 0.895345554 0.947538789 0.073812331 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 3L - 9494884 9495010 3'utr path FlyBase G35739.1 GAGTAATAAGTTACATTGAATTGCCCCGATATTCACTATGTGTAAACATACTTATTTTGTTGCATACATATTTTTGTATTTTAATTATAGCTATTAAAGAGAAATACTTAGCGAAACTATCAAGTAA 28 9494990 0.986577132 11 22 211 0.878787879 1.462397998 0.060606061 0.178571429 0.303030303 28 4 0 29 3L:9494884-9495010 6 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 GAATTG 6mer2-7 dme-miR-932-5p 3L - 9494974 9495005 3'utr path FlyBase G27021.1 ATAAGTTACATTGAATTGCCCCGATATTCACT 11 9494991 0.649993773 4 10 76 0.947368421 1.255272505 0.052631579 0.545454545 0.736842105 11 1 0 18 3L:9494974-9495005 6 13 2498 FBgn0036007 512.66 22.65333333 35.05666667 0.025357937 0.573866981 0.370828183 -3 -2 -2.5 0.15 dme-miR-276a-3p 6mer3-8 AGTTCC 3L 9495066 9495071 - 3L_9495066_9495071_- 0.999336424 0.998278695 0.99880756 0.000747907 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 3L - 9495044 9495088 3'utr path FlyBase G35740.1 CTATTTTGCAATCGATCAGTTCCAAATATGTTGAGCTAAATTACT 24 9495069 0.846063913 5 23 196 0.96 1.079181246 0.08 0.041666667 0.08 24 0 1 24 3L:9495044-9495088 6 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 AGTTCC 6mer3-8 dme-miR-276a-3p 3L - 9495052 9495086 3'utr path FlyBase G27022.1 ATTTTGCAATCGATCAGTTCCAAATATGTTGAGCT 14 9495069 0.853252409 2 11 93 0.85 0.929418926 0.2 0.357142857 0.55 14 2 1 17 3L:9495052-9495086 6 15 2499 FBgn0036007 512.66 22.65333333 35.05666667 0.029259158 0.662154208 0.427878673 -2 -2 -2 0.15 dme-miR-995-5p 6mer3-8 AATTCG 3L 9495160 9495165 - 3L_9495160_9495165_- 0.999999586 0.999998508 0.999999047 7.78E-07 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 3L - 9495144 9495190 3'utr path FlyBase G35741.1 CCCACTTTTACTTTGTTCCGTGGCAAATTCGCGTGATTTGCGTACAT 40 9495177 0.586167386 14 35 338 0.875 1.62324929 0.104166667 0.15 0.291666667 40 6 0 42 3L:9495144-9495190 6 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 AATTCG 6mer3-8 dme-miR-995-5p 3L - 9495108 9495189 3'utr path FlyBase G27023.1 CCACTTTTACTTTGTTCCGTGGCAAATTCGCGTGATTTGCGTACATTATTTAACATTTTAGCATGTTTAGTAAGTAAGCGTA 36 9495177 0.681578625 15 33 360 0.905660377 1.681241237 0.188679245 0.361111111 0.566037736 36 5 0 48 3L:9495108-9495189 6 26 2500 FBgn0036007 512.66 22.65333333 35.05666667 0.050715874 1.147733961 0.741656366 12 12 12 0.15 dme-miR-282-5p 7mer-m8 AGAGGCT 3L 9495298 9495304 - 3L_9495298_9495304_- 0.631521742 0.631524144 0.631522943 1.70E-06 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 3L - 9495235 9495509 3'utr path FlyBase G35742.1 CTACCGAGCACCATTATGCCGTTTTAGCACGTTTTAGTACACTCGCGATTATATAATGTAGAGAGTAAGCTAGTTGATAGCCGTTCAGAAACACTTTTAGAACAGTTCTGAACGATTCAAGCGGCATTCAAACTGGAACTTTACTAAGTGCACTTTAATAGTTTCCTATTGATTTCCTATTAATACCATTTAGTATGGATCTGTAAGAGGCTTAGTTACGTACCATCCTCCAAAAATCCCCACCCTTTCCTCTCTGTTCTAAAATAGTATTACTC 153 9495297 0.925718003 52 145 1226 0.95212766 1.775731776 0.14893617 0.189542484 0.340425532 153 7 2 179 3L:9495235-9495509 7 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 AGAGGCT 7mer-m8 dme-miR-282-5p 3L - 9495290 9495353 3'utr path FlyBase G27024.2 AATAGTTTCCTATTGATTTCCTATTAATACCATTTAGTATGGATCTGTAAGAGGCTTAGTTACG 47 9495297 0.679395505 14 45 391 0.96875 1.792391689 0.078125 0.319148936 0.5 47 2 0 62 3L:9495290-9495353 7 42 2501 FBgn0036007 512.66 22.65333333 35.05666667 0.081925643 1.854031783 1.198060283 -7 -7 -7 0.15 dme-miR-34-5p 7mer-A1 ACTGCCA 3L 9507401 9507407 - 3L_9507401_9507407_- 0.674624286 0.702750841 0.688687563 0.019888439 CG3408 FBtr0076426|FBtr0333863 9506816|9506816 9507578|9507578 3L - 9507354 9507484 3'utr CG3408 FlyBase G35760.1 AATTCAAAATGAGATACGTGTTGACCACCTGAACGAGTTATACGACTGCTACTTTGATATACCATTATCTGTAATTTACTGCCATTTATTTTGATAGACACTAAGCCCACTACGTCCATTGAAGGGAGATT 98 9507435 0.804423284 23 93 690 0.947826087 2.037426498 0.295652174 0.153061224 0.27826087 98 6 0 109 3L:9507354-9507484 7 CG3408 FBtr0076426|FBtr0333863 9506816|9506816 9507578|9507578 ACTGCCA 7mer-A1 dme-miR-34-5p 3L - 9507354 9507484 3'utr CG3408 FlyBase G27043.1 AATTCAAAATGAGATACGTGTTGACCACCTGAACGAGTTATACGACTGCTACTTTGATATACCATTATCTGTAATTTACTGCCATTTATTTTGATAGACACTAAGCCCACTACGTCCATTGAAGGGAGATT 90 9507436 0.987277269 25 82 724 0.920863309 1.26211193 0.258992806 0.4 0.611510791 90 5 6 128 3L:9507354-9507484 7 26 2502 FBgn0036008 265.6766667 17.37666667 26.79 0.097863318 1.496259352 0.970511385 28 29 28.5 0.15 dme-miR-1002-5p 6mer3-8 CTACTT 3L 9507431 9507436 - 3L_9507431_9507436_- 0.641109252 0.626377782 0.633743517 0.010416744 CG3408 FBtr0076426|FBtr0333863 9506816|9506816 9507578|9507578 3L - 9507354 9507484 3'utr CG3408 FlyBase G35760.1 AATTCAAAATGAGATACGTGTTGACCACCTGAACGAGTTATACGACTGCTACTTTGATATACCATTATCTGTAATTTACTGCCATTTATTTTGATAGACACTAAGCCCACTACGTCCATTGAAGGGAGATT 98 9507435 0.804423284 23 93 690 0.947826087 2.037426498 0.295652174 0.153061224 0.27826087 98 6 0 109 3L:9507354-9507484 6 CG3408 FBtr0076426|FBtr0333863 9506816|9506816 9507578|9507578 CTACTT 6mer3-8 dme-miR-1002-5p 3L - 9507354 9507484 3'utr CG3408 FlyBase G27043.1 AATTCAAAATGAGATACGTGTTGACCACCTGAACGAGTTATACGACTGCTACTTTGATATACCATTATCTGTAATTTACTGCCATTTATTTTGATAGACACTAAGCCCACTACGTCCATTGAAGGGAGATT 90 9507436 0.987277269 25 82 724 0.920863309 1.26211193 0.258992806 0.4 0.611510791 90 5 6 128 3L:9507354-9507484 6 39.5 2503 FBgn0036008 265.6766667 17.37666667 26.79 0.148676963 2.273163246 1.474430758 -1 0 -0.5 0.15 dme-miR-14-3p 7mer-A1 AGACTGA 3L 9596485 9596491 + 3L_9596485_9596491_+ 0.823274027 0.82328456 0.823279294 7.50E-06 CG42673 FBtr0302711 9595238 9596713 3L + 9596463 9596513 3'utr CG42673 FlyBase G29216.1 AATTTATGCAAAACGATTTTTGAGACTGAAACTGAAATTTGTACTAAGCAT 59 9596483 0.771565812 4 59 355 1 1.819543936 0.348484848 0.101694915 0.196969697 59 0 0 66 3L:9596463-9596513 7 CG42673 FBtr0302711 9595238 9596713 AGACTGA 7mer-A1 dme-miR-14-3p 3L + 9596463 9596500 3'utr CG42673 FlyBase G22103.1 AATTTATGCAAAACGATTTTTGAGACTGAAACTGAAAT 69 9596483 0.712520464 4 68 417 0.989010989 1.954242509 0.395604396 0.289855072 0.461538462 69 1 0 90 3L:9596463-9596500 7 63.5 2504 FBgn0261555 60.33333333 2.016666667 3.083333333 1.052486188 31.48760331 20.59459459 2 2 2 0.15 dme-miR-79-3p 7mer-A1 AGCTTTA 3L 9623600 9623606 + 3L_9623600_9623606_+ 0.823259723 0.823129198 0.823194461 9.23E-05 LanB2 FBtr0076382|FBtr0345031 9623389|9623389 9623980|9623980 3L + 9623576 9623671 3'utr LanB2 FlyBase G29254.3 AAGGAGACCAACTGAGCAACGTTAAGCTTTAACGCATCATCGTTCGCCTACTGTATGCCATATACTATAATGATACAACGGATACAAGAGGATGGA 57 9623598 0.97239241 10 50 323 0.884057971 1.183269844 0.376811594 0.175438596 0.31884058 57 5 3 61 3L:9623576-9623671 7 LanB2 FBtr0345031|FBtr0076382 9623389|9623389 9623980|9623980 AGCTTTA 7mer-A1 dme-miR-79-3p 3L + 9623577 9623638 3'utr LanB2 FlyBase G22134.3 AGGAGACCAACTGAGCAACGTTAAGCTTTAACGCATCATCGTTCGCCTACTGTATGCCATAT 38 9623598 0.823802956 5 30 215 0.833333333 1.22184875 0.25 0.394736842 0.616666667 38 8 2 50 3L:9623577-9623638 7 38 2505 FBgn0267348 4568.76 93.89666667 143.73 0.008317355 0.404700202 0.26438461 2 2 2 0.15 dme-miR-305-3p 8mer-A1 ATGTGCCA 3L 9623890 9623897 + 3L_9623890_9623897_+ 0.602629402 0.611848089 0.607238745 0.006518605 LanB2 FBtr0076382|FBtr0345031 9623389|9623389 9623980|9623980 3L + 9623817 9623935 3'utr LanB2 FlyBase G29255.1 ATATCTCTACCGTAGCTCCACCTGAAGTCTATTCTAAACACTTATATATTAACATATTTGTCATCTACGTTTAATGTGCCAATACAATTACCATGTATCTTTGTGTATAAGTCGCTTAA 68 9623917 0.84241447 22 67 587 0.987654321 1.903089987 0.111111111 0.176470588 0.308641975 68 1 0 80 3L:9623817-9623935 8 LanB2 FBtr0345031|FBtr0076382 9623389|9623389 9623980|9623980 ATGTGCCA 8mer-A1 dme-miR-305-3p 3L + 9623862 9623932 3'utr LanB2 FlyBase G22138.1 ATATTAACATATTTGTCATCTACGTTTAATGTGCCAATACAATTACCATGTATCTTTGTGTATAAGTCGCT 13 9623917 0.98815038 7 12 118 0.95 1.278753601 0.1 0.384615385 0.6 13 1 0 19 3L:9623862-9623932 8 12.5 2506 FBgn0267348 4568.76 93.89666667 143.73 0.002735972 0.133125067 0.086968622 -27 -27 -27 0.15 dme-miR-33-5p 6mer3-8 CAATGC 3L 9716249 9716254 + 3L_9716249_9716254_+ 0.996628761 0.990277106 0.993452934 0.00449133 vsg FBtr0076399|FBtr0076400|FBtr0076398|FBtr0076401 9716221|9716221|9716221|9716221 9717716|9717716|9717716|9717716 3L + 9716196 9716339 stop_codon vsg FlyBase G29291.1 AACGAGCGCAACTACCACACCCTTTGAGCCGCCACCGCCTTTACGTCGGCCTTCAATGCGGCAGCCGGAGCTGCGGCGGCCAGCAGCAGTGCCGCATCCACGGATGCGGAGCGCGTGCGGTTTGTCCAGCCTTCGATACCGCTA 63 9716252 0.971479196 14 61 244 0.972972973 1.556302501 0.324324324 0.158730159 0.283783784 63 1 1 72 3L:9716196-9716339 6 vsg FBtr0076401|FBtr0076398|FBtr0076399|FBtr0076400 9716221|9716221|9716221|9716221 9717716|9717716|9717716|9717716 CAATGC 6mer3-8 dme-miR-33-5p 3L + 9716205 9716282 stop_codon vsg FlyBase G22165.1 AACTACCACACCCTTTGAGCCGCCACCGCCTTTACGTCGGCCTTCAATGCGGCAGCCGGAGCTGCGGCGGCCAGCAGC 19 9716252 0.980689344 5 19 61 1 1.414973348 0.423076923 0.315789474 0.5 19 0 0 26 3L:9716205-9716282 6 17.5 2507 FBgn0045823 8137.983333 435.5866667 668.4 0.00215041 0.040175702 0.026181927 -3 -3 -3 0.15 dme-miR-1003-3p 8mer-A1 ATGTGAGA 3L 9716931 9716938 + 3L_9716931_9716938_+ 0.520701585 0.390953752 0.455827669 0.091745549 vsg FBtr0076399|FBtr0076400|FBtr0330097|FBtr0076398|FBtr0076401 9716221|9716221|9716461|9716221|9716221 9717716|9717716|9717716|9717716|9717716 3L + 9716840 9716964 3'utr vsg FlyBase G29295.1 AGGGTCTTCCCAGGGCGACCATGAACCGAGAAATGAGTTATGAGATCGAAACGAAACGAGACGAGAGGAGTAAGAACAAATAACAGCAAATATGTGAGACTGCTTGATAGCGAGAAAGTGAAGAG 573 9716934 0.909584948 12 550 3109 0.96257485 1.853968463 0.359281437 0.144851658 0.266467066 573 17 8 643 3L:9716840-9716964 8 vsg FBtr0076401|FBtr0330097|FBtr0076398|FBtr0076399|FBtr0076400 9716221|9716461|9716221|9716221|9716221 9717716|9717716|9717716|9717716|9717716 ATGTGAGA 8mer-A1 dme-miR-1003-3p 3L + 9716821 9716968 3'utr vsg FlyBase G22170.1 AGTCCGGGGAGCCTGTCACAGGGTCTTCCCAGGGCGACCATGAACCGAGAAATGAGTTATGAGATCGAAACGAAACGAGACGAGAGGAGTAAGAACAAATAACAGCAAATATGTGAGACTGCTTGATAGCGAGAAAGTGAAGAGATCA 526 9716934 0.968363719 13 512 2794 0.974452555 2.301572525 0.412408759 0.418250951 0.627737226 526 18 3 801 3L:9716821-9716968 8 500.5 2508 FBgn0045823 8137.983333 435.5866667 668.4 0.061501723 1.14902507 0.748803112 -3 -3 -3 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 9721102 9721108 - 3L_9721102_9721108_- 0.748403302 0.687616463 0.718009882 0.042982758 nbs FBtr0306041|FBtr0306041|FBtr0306041 9720412|9720412|9720412 9722003|9722003|9722003 3L - 9721089 9721133 5'utr nbs FlyBase G35833.1 GCTAAACGAAAGCGACAGCGATGATTGTGATAATCTTTTTAACTT 40 9721110 0.982852556 2 36 276 0.934782609 1.33243846 0.152173913 0.153846154 0.282608696 39 2 1 43 3L:9721089-9721133 7 nbs FBtr0306041|FBtr0306041|FBtr0306041 9720412|9720412|9720412 9722003|9722003|9722003 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 9721084 9721129 5'utr nbs FlyBase G27102.1 AACGAAAGCGACAGCGATGATTGTGATAATCTTTTTAACTTTGCAG 33 9721109 0.984256654 6 29 231 0.914893617 1.633468456 0.191489362 0.393939394 0.574468085 33 4 0 43 3L:9721084-9721129 7 35.5 2509 FBgn0261530 423 19.85333333 30.51333333 0.08392435 1.788112827 1.163425825 2 1 1.5 0.15 dme-miR-932-5p 6mer3-8 GGAATT 3L 9729294 9729299 + 3L_9729294_9729299_+ 0.993984208 0.993157236 0.993570722 0.000584777 Naa60 FBtr0089410|FBtr0089411 9728844|9728844 9729650|9729650 3L + 9729215 9729309 3'utr Naa60 FlyBase G29317.1 AAAAGATATCTATCTGTTCACTACTGCTGTAAATAGTCTTATGATGTTTTGTTTGAATCGAGCTGTAACCGAGTGATTTGGAATTAGCATAGCCC 27 9729292 0.755131322 8 25 202 0.96875 1.491361694 0.5 0.148148148 0.28125 27 1 0 31 3L:9729215-9729309 6 Naa60 FBtr0089411|FBtr0089410 9728844|9728844 9729650|9729650 GGAATT 6mer3-8 dme-miR-932-5p 3L + 9729265 9729302 3'utr Naa60 FlyBase G22185.1 GTTTGAATCGAGCTGTAACCGAGTGATTTGGAATTAGC 10 9729292 0.961810727 3 10 57 1 1.278753601 0.157894737 0.5 0.736842105 10 0 0 19 3L:9729265-9729302 6 12.5 2510 FBgn0036039 253.3733333 14.26 21.89 0.049334316 0.87657784 0.571037003 2 2 2 0.15 dme-miR-283-5p 6mer3-8 TGATAT 3L 9834583 9834588 - 3L_9834583_9834588_- 0.902815022 0.91996955 0.911392286 0.012130063 I-2 FBtr0076370|FBtr0112935 9834365|9834365 9835007|9835007 3L - 9834531 9834650 3'utr I-2 FlyBase G35838.1 ATGCGTCTCAGCCGTAGCGTCCTGTATTGTTGCAAATGTAGTTAAACAAAAGTCTTTCAAATTGATATCGAGATGGAAAGCCAACCCGTTCGCAGCTCCGTTTGCATTTAATTTGATTGG 32 9834589 0.795298144 8 31 252 1 1.568201724 0.108108108 0.15625 0.27027027 32 0 0 37 3L:9834531-9834650 6 I-2 FBtr0076370|FBtr0112935 9834365|9834365 9835007|9835007 TGATAT 6mer3-8 dme-miR-283-5p 3L - 9834536 9834648 3'utr I-2 FlyBase G27108.1 GCGTCTCAGCCGTAGCGTCCTGTATTGTTGCAAATGTAGTTAAACAAAAGTCTTTCAAATTGATATCGAGATGGAAAGCCAACCCGTTCGCAGCTCCGTTTGCATTTAATTTG 20 9834589 0.980797384 7 20 152 1 1.397940009 0.2 0.2 0.36 20 0 0 25 3L:9834536-9834648 6 18 2511 FBgn0028429 476.1233333 37.47333333 57.58666667 0.037805331 0.480341576 0.312572355 1 1 1 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 3L 9839158 9839164 - 3L_9839158_9839164_- 0.781567547 0.781417008 0.781492278 0.00010642 RasGAP1 FBtr0076368 9839091 9840561 3L - 9839145 9839187 3'utr RasGAP1 FlyBase G35847.1 CATGCCTAGCTGATAAGTTGTTGGTACAAAGAATCGAAAATAA 72 9839166 0.717684998 6 63 499 0.87804878 1.556302501 0.146341463 0.125 0.231707317 72 9 1 72 3L:9839145-9839187 7 RasGAP1 FBtr0076368 9839091 9840561 GTACAAA 7mer-A1 dme-miR-305-5p 3L - 9839096 9839189 3'utr RasGAP1 FlyBase G27116.1 ACCATGCCTAGCTGATAAGTTGTTGGTACAAAGAATCGAAAATAAAAACATAGATATTTTCCAAGGGAAAAATAAAGCGTATCGCCAATGGATA 85 9839166 0.980065407 8 79 551 0.952 1.598425707 0.192 0.364705882 0.568 85 4 2 119 3L:9839096-9839189 7 75.5 2512 FBgn0004390 1606.046667 35.75666667 55.00333333 0.047009842 2.11149436 1.372644082 2 2 2 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 3L 9839216 9839222 - 3L_9839216_9839222_- 0.619641849 0.620204085 0.619922967 0.000397606 RasGAP1 FBtr0076368 9839091 9840561 3L - 9839201 9839265 3'utr RasGAP1 FlyBase G35848.1 TGTTTGGAGTTTCCAACGTGGTTCATATACATATAATTTCACTTGCATTTTAAGGACACAATTAT 8 9839224 0.986844698 6 8 69 1 1 0.2 0.25 0.4 8 0 0 10 3L:9839201-9839265 7 RasGAP1 FBtr0076368 9839091 9840561 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 9839203 9839230 3'utr RasGAP1 FlyBase G27117.1 ATTTCACTTGCATTTTAAGGACACAATT 5 9839216 0.97312014 4 5 37 1 0.698970004 0 0 0 5 0 0 5 3L:9839203-9839230 7 4.5 2513 FBgn0004390 1606.046667 35.75666667 55.00333333 0.002801911 0.125850657 0.081813223 2 -6 -2 0.15 dme-miR-7-5p 7mer-m8 GTCTTCC 3L 9839410 9839416 - 3L_9839410_9839416_- 0.705650033 0.705941955 0.705795994 0.000206475 RasGAP1 FBtr0076368 9839091 9840561 3L - 9839357 9839436 3'utr RasGAP1 FlyBase G35849.1 CATCAATCGCATTGAAAAGTGTCTTCCTTCGCCGCGTTCAATCATATTGCCTTTTGTTTATGCATTCCAATCCAATAATT 16 9839417 0.989993035 4 14 134 0.882352941 0.875061263 0.117647059 0.0625 0.117647059 16 1 1 15 3L:9839357-9839436 7 RasGAP1 FBtr0076368 9839091 9840561 GTCTTCC 7mer-m8 dme-miR-7-5p 3L - 9839397 9839432 3'utr RasGAP1 FlyBase G27118.1 AATCGCATTGAAAAGTGTCTTCCTTCGCCGCGTTCA 16 9839417 0.775990243 3 16 117 1 1.477121255 0.1 0.75 0.866666667 16 0 0 30 3L:9839397-9839432 7 14 2514 FBgn0004390 1606.046667 35.75666667 55.00333333 0.008717057 0.391535378 0.254530028 1 1 1 0.15 dme-miR-278-3p 7mer-A1 CCACCGA 3L 9839535 9839541 - 3L_9839535_9839541_- 0.823095332 0.823098023 0.823096677 1.91E-06 RasGAP1 FBtr0076368 9839091 9840561 3L - 9839500 9839565 3'utr RasGAP1 FlyBase G35850.1 GATTTGGTTAGCTTCGACTTACTTCCACCGATTTGTTTCCAAAGCTCTTCCATATTAATTACACAT 37 9839543 0.782668924 11 37 302 1 1.69019608 0.081632653 0.243243243 0.428571429 37 0 0 49 3L:9839500-9839565 7 RasGAP1 FBtr0076368 9839091 9840561 CCACCGA 7mer-A1 dme-miR-278-3p 3L - 9839510 9839560 3'utr RasGAP1 FlyBase G27119.1 GGTTAGCTTCGACTTACTTCCACCGATTTGTTTCCAAAGCTCTTCCATATT 17 9839543 0.98754403 4 16 144 0.925925926 1.397940009 0.037037037 0.470588235 0.666666667 17 2 0 25 3L:9839510-9839560 7 24.5 2515 FBgn0004390 1606.046667 35.75666667 55.00333333 0.015254849 0.685186912 0.44542755 2 2 2 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 3L 9840436 9840442 - 3L_9840436_9840442_- 0.72787507 0.782855 0.755365035 0.03887666 RasGAP1 FBtr0076367|FBtr0330168|FBtr0076368 9839684|9839684|9839091 9840561|9840507|9840561 3L - 9840408 9840470 3'utr RasGAP1 FlyBase G35853.1 CGCTCCTACGCAACCAGAGGATGCTGCTGTACAAAACGATTAATTGTGCTAATTTCTAGGCTC 60 9840449 0.880378288 9 55 290 0.942857143 1.342422681 0.2 0.15 0.271428571 60 2 2 66 3L:9840408-9840470 7 RasGAP1 FBtr0076368|FBtr0330168|FBtr0076367 9839091|9839684|9839684 9840561|9840507|9840561 GTACAAA 7mer-A1 dme-miR-305-5p 3L - 9840405 9840469 3'utr RasGAP1 FlyBase G27122.1 GCTCCTACGCAACCAGAGGATGCTGCTGTACAAAACGATTAATTGTGCTAATTTCTAGGCTCTTG 37 9840447 0.767307546 6 35 154 0.966101695 1.278753601 0.254237288 0.324324324 0.576271186 37 0 2 57 3L:9840405-9840469 7 42 2516 FBgn0004390 1606.046667 35.75666667 55.00333333 0.02615117 1.174606134 0.763590085 7 5 6 0.15 dme-miR-252-5p 6mer3-8 GTACTT 3L 9860626 9860631 - 3L_9860626_9860631_- 0.999998439 0.980127806 0.990063122 0.014050636 iPLA2-VIA FBtr0076363|FBtr0076362|FBtr0076364|FBtr0076365 9860215|9860215|9860215|9860215 9860704|9860704|9860704|9860704 3L - 9860593 9860688 3'utr iPLA2-VIA FlyBase G35881.1 AGACCGCATTTGCTGTAGAGATCTCTCATTCGAGGGATCCTTTCGATTCATGTCCGTGTACTTTAGACTCGTTTAACCCTCTTCGTTTTTATTAAG 35 9860627 0.746402216 12 33 318 0.95 1.579783597 0.35 0.114285714 0.225 35 2 0 38 3L:9860593-9860688 6 iPLA2-VIA FBtr0076365|FBtr0076364|FBtr0076362|FBtr0076363 9860215|9860215|9860215|9860215 9860704|9860704|9860704|9860704 GTACTT 6mer3-8 dme-miR-252-5p 3L - 9860606 9860688 3'utr iPLA2-VIA FlyBase G27145.1 AGACCGCATTTGCTGTAGAGATCTCTCATTCGAGGGATCCTTTCGATTCATGTCCGTGTACTTTAGACTCGTTTAACCCTCTT 27 9860626 0.764961691 11 26 239 0.975 1.290034611 0.125 0.296296296 0.525 27 0 1 39 3L:9860606-9860688 6 20.5 2517 FBgn0036053 1579.763333 56.89333333 87.11666667 0.012976627 0.360323412 0.235316625 -4 -5 -4.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 3L 9892397 9892402 + 3L_9892397_9892402_+ 0.971309463 0.991428414 0.981368938 0.014226211 CalpB FBtr0076343|FBtr0304675 9892344|9892344 9893319|9893011 3L + 9892355 9892415 3'utr CalpB FlyBase G29359.1 AATTGCTACTAATCTAATCCTAAGTGCGACGTATACTTAATCTACCTGTGCATCATATTAT 90 9892403 0.911279172 10 87 716 0.973684211 2.045322979 0.00877193 0.211111111 0.377192982 90 3 0 111 3L:9892355-9892415 6 CalpB FBtr0304675|FBtr0076343 9892344|9892344 9893011|9893319 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 3L + 9892373 9892424 3'utr CalpB FlyBase G22210.1 CCTAAGTGCGACGTATACTTAATCTACCTGTGCATCATATTATTCATGCATT 44 9892403 0.851781486 8 43 353 0.985915493 1.84509804 0.014084507 0.477272727 0.676056338 44 1 0 70 3L:9892373-9892424 6 64.5 2518 FBgn0025866 591.89 16.56333333 25.20333333 0.108972951 3.894143691 2.559185293 -6 -6 -6 0.15 dme-miR-282-5p 7mer-m8 AGAGGCT 3L 9893175 9893181 + 3L_9893175_9893181_+ 0.631524569 0.631524568 0.631524568 0 CalpB FBtr0076343 9892344 9893319 3L + 9893160 9893188 3'utr CalpB FlyBase G29363.1 TAACCAATCGGGTTTAGAGGCTCTTTTTG 5 9893174 0.641428468 3 4 43 0.888888889 0.903089987 0.222222222 0.6 0.777777778 5 1 0 8 3L:9893160-9893188 7 CalpB FBtr0076343 9892344 9893319 AGAGGCT 7mer-m8 dme-miR-282-5p 3L + 9893154 9893188 3'utr CalpB FlyBase G22213.1 TGAAATTAACCAATCGGGTTTAGAGGCTCTTTTTG 8 9893174 0.980765952 4 8 64 1 1 0.6 0.125 0.3 8 0 0 10 3L:9893154-9893188 7 6 2519 FBgn0025866 591.89 16.56333333 25.20333333 0.010137019 0.362245925 0.238063748 1 1 1 0.15 dme-miR-283-5p 8mer-A1 TGATATTA 3L 9895667 9895674 - 3L_9895667_9895674_- 0.592191572 0.592167349 0.59217946 1.72E-05 CG6707 FBtr0076356|FBtr0076358|FBtr0076357 9894805|9894805|9894805 9895759|9895759|9895759 3L - 9895656 9895736 3'utr CG6707 FlyBase G35913.1 AAGGAAGAAAGTGCATTGTTTTATTTTTATATATATATATTATTCATATATATCATTCCTTTTGATATTAAATTTAAAACT 17 9895675 0.963762983 10 16 186 0.95 1.278753601 0.1 0.176470588 0.3 17 1 0 19 3L:9895656-9895736 8 CG6707 FBtr0076357|FBtr0076356|FBtr0076358 9894805|9894805|9894805 9895759|9895759|9895759 TGATATTA 8mer-A1 dme-miR-283-5p 3L - 9895658 9895691 3'utr CG6707 FlyBase G27171.1 ATATATATCATTCCTTTTGATATTAAATTTAAAA 5 9895676 0.918878124 3 5 56 1 0.84509804 0 0.4 0.571428571 5 0 0 7 3L:9895658-9895691 8 7.5 2520 FBgn0036058 1005.72 59.74 91.51 0.007457344 0.125544024 0.081958256 1 2 1.5 0.15 dme-miR-283-5p 7mer-A1 GATATTA 3L 9902465 9902471 + 3L_9902465_9902471_+ 0.782911824 0.7829107 0.782911262 7.78E-07 nudE FBtr0345694|FBtr0076344|FBtr0113158|FBtr0345695 9902278|9902337|9902278|9902278 9902965|9902965|9902965|9903031 3L + 9902430 9902531 3'utr nudE FlyBase G29378.1 ATTTGAACTAAAATGACTTTGTATAAACCACTTGCGATATTATGAATTACACAACAGTTGATGTTGTTGTTTCGAGCCCAACATATATAACATGCCTTAGTA 108 9902461 0.98142893 16 106 772 0.985185185 1.822821645 0.081481481 0.231481481 0.385185185 108 1 1 133 3L:9902430-9902531 7 nudE FBtr0345694|FBtr0076344|FBtr0113158|FBtr0345695 9902278|9902337|9902278|9902278 9902965|9902965|9902965|9903031 GATATTA 7mer-A1 dme-miR-283-5p 3L + 9902400 9902481 3'utr nudE FlyBase G22228.1 ATTAATTAAGTTTCTGCTGCCTCTTTATTTATTTGAACTAAAATGACTTTGTATAAACCACTTGCGATATTATGAATTACAC 87 9902449 0.831453804 11 86 641 0.992125984 1.799340549 0.007874016 0.344827586 0.551181102 87 0 1 126 3L:9902400-9902481 7 46.5 2521 FBgn0036059 1404.16 85.35333333 130.67 0.033115884 0.544794189 0.355858269 4 16 10 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 9970951 9970957 + 3L_9970951_9970957_+ 0.752703061 0.753361408 0.753032234 0.000465488 Dronc FBtr0076347|FBtr0076347|FBtr0076347 9970748|9970748|9970748 9971002|9971002|9971002 3L + 9970935 9970974 3'utr Dronc FlyBase G29394.1 GAAATTATGTAATTTATGTGATAACTGCCAGAAATCTACA 35 9970948 0.642870553 6 31 267 0.87804878 1.255272505 0.414634146 0.142857143 0.268292683 35 4 1 36 3L:9970935-9970974 7 Dronc FBtr0076347|FBtr0076347|FBtr0076347 9970748|9970748|9970748 9971002|9971002|9971002 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 9970928 9970971 3'utr Dronc FlyBase G22243.1 AAGGTACGAAATTATGTAATTTATGTGATAACTGCCAGAAATCT 22 9970948 0.899930366 5 21 183 0.962962963 1.414973348 0.333333333 0.227272727 0.37037037 22 1 0 26 3L:9970928-9970971 7 28.5 2522 FBgn0026404 332.5566667 20.05666667 30.72333333 0.08569968 1.420973907 0.92763372 3 3 3 0.15 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3L 997693 997698 - 3L_997693_997698_- 0.978881771 0.793803682 0.886342726 0.13086998 trio FBtr0072646|FBtr0072645|FBtr0072649|FBtr0072648|FBtr0072647|FBtr0072644 995980|995980|997208|995980|995980|995980 998084|998084|998084|998084|998084|998084 3L - 997673 997751 3'utr trio FlyBase G33172.2 CTATTCCGGATTTGTGTGTATGAAACGCAAAGTATTATATGCTCAAGATTACCTTTGACATTGTGTGCATTTTTAACTT 187 997696 0.779123676 16 180 1367 0.988764045 2.120573931 0.04494382 0.315508021 0.520599251 187 2 1 264 3L:997673-997751 6 trio FBtr0072647|FBtr0072644|FBtr0072646|FBtr0072645|FBtr0072649|FBtr0072648 995980|995980|995980|995980|997208|995980 998084|998084|998084|998084|998084|998084 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3L - 997673 997758 3'utr trio FlyBase G25101.1 TTGTTTTCTATTCCGGATTTGTGTGTATGAAACGCAAAGTATTATATGCTCAAGATTACCTTTGACATTGTGTGCATTTTTAACTT 113 997696 0.80283772 15 109 834 0.966292135 1.457377197 0.04494382 0.451327434 0.651685393 113 1 5 172 3L:997673-997758 6 128 2523 FBgn0024277 3958.67 117.21 180.3966667 0.032334092 1.092056992 0.709547479 -2 -2 -2 0.15 dme-miR-184-3p 6mer3-8 TCCGTC 3L 997929 997934 - 3L_997929_997934_- 0.998867785 0.998715566 0.998791676 0.000107622 trio FBtr0072646|FBtr0072645|FBtr0072649|FBtr0072648|FBtr0072647|FBtr0072644 995980|995980|997208|995980|995980|995980 998084|998084|998084|998084|998084|998084 3L - 997891 997959 3'utr trio FlyBase G33174.1 TGAGCATTAGCCTCGCACTTGTTTTTCCGTCTGTGCGTTTGTTTACGGATAGTTTTGCTCACTCACACC 79 997935 0.77147714 7 76 972 0.965517241 1.924279286 0.057471264 0.088607595 0.172413793 79 3 0 84 3L:997891-997959 6 trio FBtr0072647|FBtr0072644|FBtr0072646|FBtr0072645|FBtr0072649|FBtr0072648 995980|995980|995980|995980|997208|995980 998084|998084|998084|998084|998084|998084 TCCGTC 6mer3-8 dme-miR-184-3p 3L - 997837 997961 3'utr trio FlyBase G25102.1 AGTGAGCATTAGCCTCGCACTTGTTTTTCCGTCTGTGCGTTTGTTTACGGATAGTTTTGCTCACTCACACCCAGAAACACTCGCATACTCAATCCTAATTTGTATGTAACTTGTAATTGTAATTT 65 997935 0.987691095 10 64 769 0.97 1.986771734 0.09 0.369230769 0.59 65 3 0 97 3L:997837-997961 6 64.5 2524 FBgn0024277 3958.67 117.21 180.3966667 0.016293351 0.550294343 0.357545409 1 1 1 0.15 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 10002284 10002289 - 3R_10002284_10002289_- 0.78963575 0.798580714 0.794108232 0.006324999 Mical FBtr0347211|FBtr0082207|FBtr0347214|FBtr0347212|FBtr0082213|FBtr0082212|FBtr0082208|FBtr0082209|FBtr0306608|FBtr0347213|FBtr0082210|FBtr0306609 10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552 10009621|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434 3R - 10002262 10002302 3'utr Mical FlyBase G49745.1 ACTAAAACCCGTGAGCTGTAACCGAAACGAGCAACTAACTA 22 10002291 0.895274207 3 22 58 1 1.477121255 0 0.272727273 0.466666667 22 0 0 30 3R:10002262-10002302 6 Mical FBtr0306609|FBtr0306608|FBtr0347213|FBtr0082210|FBtr0082209|FBtr0082208|FBtr0082212|FBtr0082213|FBtr0347212|FBtr0347214|FBtr0082207|FBtr0347211 10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552 10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10009621 AGCTGT 6mer3-8 dme-miR-1008-3p 3R - 10002269 10002356 3'utr Mical FlyBase G37603.1 AGGGAACAGGGGAGAGCGTACCAAAAAGGCAGCTGAATATACAGAATTAACAATACTAAAACCCGTGAGCTGTAACCGAAACGAGCAA 29 10002291 0.900392162 6 27 72 0.953488372 1.612783857 0.162790698 0.413793103 0.604651163 29 2 0 41 3R:10002269-10002356 6 19.5 2525 FBgn0053208 877.6666667 10.30333333 15.81666667 0.022218002 1.892591394 1.232876712 2 2 2 0.15 dme-bantam-3p 7mer-m8 TGATCTC 3R 10005448 10005454 - 3R_10005448_10005454_- 0.447904653 0.605791291 0.526847972 0.111642686 Mical FBtr0347211 10001552 10009621 3R - 10005381 10005472 5'utr Mical FlyBase G49753.1 AGCGCCCACACGTAGTGCTGATCTCTATAAGCCGCGCCCCTTCAGCGAACACATCGATTCGAACGCTCTGGCGGGTTACAAGCTCGGCAAGA 25 10005446 0.983459107 5 19 148 0.807692308 0.84509804 0.230769231 0.04 0.076923077 25 3 2 21 3R:10005381-10005472 7 Mical FBtr0347211 10001552 10009621 TGATCTC 7mer-m8 dme-bantam-3p 3R - 10005398 10005463 5'utr Mical FlyBase G37609.1 ACGTAGTGCTGATCTCTATAAGCCGCGCCCCTTCAGCGAACACATCGATTCGAACGCTCTGGCGGG 9 10005447 0.964918724 5 9 48 1 1.146128036 0.142857143 0.222222222 0.5 9 0 0 14 3R:10005398-10005463 7 13.5 2526 FBgn0053208 877.6666667 10.30333333 15.81666667 0.015381694 1.310255581 0.853530032 -8 -7 -7.5 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 10047344 10047350 - 3R_10047344_10047350_- 0.631402287 0.660262288 0.645832287 0.020407102 CG12811 FBtr0082204 10047250 10047380 3R - 10047320 10047374 3'utr CG12811 FlyBase G49764.1 TTAACATTATGTGCTTAAATGTATTGTGTTCTGTTTGGTAATGTGTGGAGGCCAG 13 10047351 0.949943185 4 13 154 1 1.146128036 0.428571429 0.076923077 0.142857143 13 0 0 14 3R:10047320-10047374 7 CG12811 FBtr0082204 10047250 10047380 TGTGTTC 7mer-m8 dme-miR-317-3p 3R - 10047308 10047373 3'utr CG12811 FlyBase G37619.1 TAACATTATGTGCTTAAATGTATTGTGTTCTGTTTGGTAATGTGTGGAGGCCAGTGAAGAATAGCG 10 10047351 0.991319331 4 10 102 1 1.079181246 0.5 0.2 0.333333333 10 0 0 12 3R:10047308-10047373 7 8.5 2527 FBgn0037779 320.7766667 40.53 62.69666667 0.026498187 0.209721194 0.135573396 1 1 1 0.15 dme-miR-283-5p 8mer-m1 TGATATTT 3R 10051478 10051485 + 3R_10051478_10051485_+ 0.555587896 0.555593816 0.555590856 4.17E-06 CG3925 FBtr0082174 10051320 10051527 3R + 10051414 10051502 3'utr CG3925 FlyBase G41687.1 ATTCGTTTCACAACTACTTTTAGCAAAAACACACGGCGTTTGATGGCGTGGATGTAAACCTAATTGATATTTACGATTATTTGAATAAT 22 10051477 0.984328457 11 20 163 0.92 0.884606581 0.32 0.136363636 0.24 22 0 2 23 3R:10051414-10051502 8 CG3925 FBtr0082174 10051320 10051527 TGATATTT 8mer-m1 dme-miR-283-5p 3R + 10051413 10051489 3'utr CG3925 FlyBase G31461.1 AATTCGTTTCACAACTACTTTTAGCAAAAACACACGGCGTTTGATGGCGTGGATGTAAACCTAATTGATATTTACGA 16 10051477 0.982135605 8 15 114 0.961538462 1.397940009 0.230769231 0.4375 0.653846154 16 1 0 25 3R:10051413-10051489 8 9.5 2528 FBgn0037780 153.6666667 8.94 13.53666667 0.061822126 1.062639821 0.701797587 1 1 1 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 10073728 10073733 + 3R_10073728_10073733_+ 0.950664086 0.93687911 0.943771598 0.009747467 nerfin-2 FBtr0082177 10073452 10073761 3R + 10073668 10073749 stop_codon nerfin-2 FlyBase G41691.1 AGTCCGGCGGAAATGTTATCATGTGACTTAACAACTATTAGCAGCATTGAATCAACGATCTCTAGTTAAAGTTTAATAAATC 73 10073731 0.91463315 12 70 522 0.965909091 1.929418926 0.056818182 0.150684932 0.295454545 73 3 0 85 3R:10073668-10073749 6 nerfin-2 FBtr0082177 10073452 10073761 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 10073662 10073744 stop_codon nerfin-2 FlyBase G31463.1 CTGCAGAGTCCGGCGGAAATGTTATCATGTGACTTAACAACTATTAGCAGCATTGAATCAACGATCTCTAGTTAAAGTTTAAT 49 10073730 0.981557683 12 47 346 0.970149254 1.511883361 0.044776119 0.265306122 0.462686567 49 1 1 65 3R:10073662-10073744 6 36 2529 FBgn0041105 0.666666667 0.036666667 0.056666667 54 981.8181818 635.2941176 -3 -2 -2.5 0.15 dme-miR-305-3p 6mer3-8 ATGTGC 3R 10101533 10101538 - 3R_10101533_10101538_- 0.983790222 0.998153067 0.990971644 0.010156104 Fmr1 FBtr0082200|FBtr0082198|FBtr0308123 10101418|10101418|10101418 10103231|10103231|10103231 3R - 10101487 10101562 3'utr Fmr1 FlyBase G49770.1 AATAATATAAATATAATGAGAAAAATGTGCGATTTAAATTTATTATTTATATAAAGATGAACTTATAAAGAATAGA 26 10101537 0.981745345 4 26 190 1 1.462397998 0.655172414 0.115384615 0.206896552 26 0 0 29 3R:10101487-10101562 6 Fmr1 FBtr0308123|FBtr0082200|FBtr0082198 10101418|10101418|10101418 10103231|10103231|10103231 ATGTGC 6mer3-8 dme-miR-305-3p 3R - 10101510 10101547 3'utr Fmr1 FlyBase G37623.1 ATGAGAAAAATGTGCGATTTAAATTTATTATTTATATA 26 10101537 0.932913922 3 26 171 1 1.579783597 0.736842105 0.346153846 0.552631579 26 0 0 38 3R:10101510-10101547 6 25 2530 FBgn0028734 4744.61 148.7233333 229.5766667 0.005269137 0.168097362 0.108896084 -1 -1 -1 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 3R 10119215 10119222 + 3R_10119215_10119222_+ 0.642636443 0.642765255 0.642700849 9.11E-05 CG3940 FBtr0344391|FBtr0082179|FBtr0344392 10119168|10119168|10119168 10119424|10119424|10120081 3R + 10119169 10119257 3'utr CG3940 FlyBase G41707.1 GATTTGAGATGGACAACTTGAAGGGAGCAGCCAATGACATACTCGTACCAAAGAATCGTTTAAGACAACGAATTTGTTTACCAACTATT 157 10119214 0.896310599 13 153 718 0.978609626 1.961421094 0.28342246 0.146496815 0.28342246 157 3 1 183 3R:10119169-10119257 8 CG3940 FBtr0082179|FBtr0344392|FBtr0344391 10119168|10119168|10119168 10119424|10120081|10119424 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 10119187 10119275 3'utr CG3940 FlyBase G31474.1 TGAAGGGAGCAGCCAATGACATACTCGTACCAAAGAATCGTTTAAGACAACGAATTTGTTTACCAACTATTTTAACAATTTAACAAAAA 64 10119214 0.976016478 7 60 282 0.956521739 1.643452676 0.097826087 0.328125 0.532608696 64 3 1 88 3R:10119187-10119275 8 99.5 2531 FBgn0037788 7.956666667 0.546666667 0.833333333 12.5052367 182.0121951 119.4 1 1 1 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3R 10119358 10119364 + 3R_10119358_10119364_+ 0.821269604 0.778921348 0.800095476 0.02994477 CG3940 FBtr0344391|FBtr0082179|FBtr0344392 10119168|10119168|10119168 10119424|10119424|10120081 3R + 10119282 10119387 3'utr CG3940 FlyBase G41708.1 GGAGACACAGGAGAGCAACGTCAGACCAGACAATTTATACTCATTAATTGTAATGCAGAACAGAACAAGAATTCAGCTAGTCAGTTTGTGTAAAGTTCATTAAGTG 141 10119354 0.982351544 14 122 913 0.865853659 1.67516709 0.18902439 0.14893617 0.268292683 141 20 2 142 3R:10119282-10119387 7 CG3940 FBtr0082179|FBtr0344392|FBtr0344391 10119168|10119168|10119168 10119424|10120081|10119424 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 10119278 10119379 3'utr CG3940 FlyBase G31474.2 AAACGGAGACACAGGAGAGCAACGTCAGACCAGACAATTTATACTCATTAATTGTAATGCAGAACAGAACAAGAATTCAGCTAGTCAGTTTGTGTAAAGTTC 86 10119354 0.976016478 12 71 552 0.868217054 1.447158031 0.209302326 0.360465116 0.573643411 86 14 3 112 3R:10119278-10119379 7 87.5 2532 FBgn0037788 7.956666667 0.546666667 0.833333333 10.99706745 160.0609756 105 4 4 4 0.15 dme-miR-190-5p 6mer3-8 ACATAT 3R 10127562 10127567 - 3R_10127562_10127567_- 0.641335983 0.989320926 0.815328455 0.246062483 tws FBtr0082187|FBtr0082190|FBtr0345177|FBtr0082188|FBtr0082189 10126127|10126127|10126127|10127125|10126803 10128146|10128146|10128146|10128146|10128146 3R - 10127524 10127608 3'utr tws FlyBase G49797.1 TTTTCTGTTCGCTTGTTAAGTTTACGATGAAAAGTCAAGAAACATATGCGCCCTGTTTGCTCTACTTTATAAATATAGACTAAAC 19 10127562 0.978667445 7 18 128 0.954545455 1.322219295 0.090909091 0.157894737 0.272727273 19 1 0 21 3R:10127524-10127608 6 tws FBtr0082189|FBtr0345177|FBtr0082188|FBtr0082187|FBtr0082190 10126803|10126127|10127125|10126127|10126127 10128146|10128146|10128146|10128146|10128146 ACATAT 6mer3-8 dme-miR-190-5p 3R - 10127540 10127572 3'utr tws FlyBase G37647.1 AAGAAACATATGCGCCCTGTTTGCTCTACTTTA 9 10127562 0.791565645 4 9 59 1 0.954242509 0.111111111 0 0 9 0 0 9 3R:10127540-10127572 6 10.5 2533 FBgn0004889 1118.713333 47.59666667 73.08666667 0.009385782 0.220603684 0.143665055 -5 -5 -5 0.15 dme-miR-970-3p 7mer-m8 TCTTATG 3R 10128050 10128056 - 3R_10128050_10128056_- 0.657925249 0.658525141 0.658225195 0.000424193 tws FBtr0082187|FBtr0082190|FBtr0082192|FBtr0082191|FBtr0082193|FBtr0345177|FBtr0082188|FBtr0082189|FBtr0082186 10126127|10126127|10127649|10127642|10127642|10126127|10127125|10126803|10127642 10128146|10128146|10128146|10128146|10128146|10128146|10128146|10128146|10128146 3R - 10128028 10128211 stop_codon tws FlyBase G49802.1 CCGAAGAAAATATCATCGCCGTGGCTGCGACCAATAACCTCTTCATATTTCAGGATAAATTTTAGCCAACACTCCTCACAAGAACCACACCATACGCCACAATCACACAAGCAACTATATCTACAGAAACACCAAGAAGTACGATCACGCCTCATTCTTATGTTAAATTAATCGGTTTGCTTCA 41 10128057 0.980352169 12 39 282 0.955555556 1.633468456 0.111111111 0.097560976 0.177777778 41 2 0 43 3R:10128028-10128211 7 tws FBtr0082189|FBtr0082186|FBtr0345177|FBtr0082188|FBtr0082191|FBtr0082193|FBtr0082187|FBtr0082190|FBtr0082192 10126803|10127642|10126127|10127125|10127642|10127642|10126127|10126127|10127649 10128146|10128146|10128146|10128146|10128146|10128146|10128146|10128146|10128146 TCTTATG 7mer-m8 dme-miR-970-3p 3R - 10128035 10128075 3'utr tws FlyBase G37651.1 AAGTACGATCACGCCTCATTCTTATGTTAAATTAATCGGTT 20 10128057 0.743410919 6 19 177 0.961538462 1.397940009 0.153846154 0.25 0.423076923 20 1 0 25 3R:10128035-10128075 7 21 2534 FBgn0004889 1118.713333 47.59666667 73.08666667 0.018771565 0.441207367 0.28733011 1 1 1 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3R 10158850 10158855 + 3R_10158850_10158855_+ 0.999599724 0.999999905 0.999799815 0.000282984 Invadolysin FBtr0082181 10158308 10159134 3R + 10158783 10158861 3'utr Invadolysin FlyBase G41714.1 AGCCAATCATTTTCGGGTGGATCATCCAAAGGCAGTTCTATGCTTCTTGAATATCGATCTGTACATTCCAAAGCCTATT 14 10158846 0.967226416 8 14 90 1 1.204119983 0.1875 0.142857143 0.25 14 0 0 16 3R:10158783-10158861 6 Invadolysin FBtr0082181 10158308 10159134 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 10158812 10158859 3'utr Invadolysin FlyBase G31480.1 AGGCAGTTCTATGCTTCTTGAATATCGATCTGTACATTCCAAAGCCTA 5 10158847 0.982929752 4 5 38 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:10158812-10158859 6 5 2535 FBgn0086359 69.66666667 2.306666667 3.503333333 0.071770335 2.167630058 1.427212179 4 3 3.5 0.15 dme-miR-305-5p 8mer-m1 AGTACAAT 3R 10302596 10302603 + 3R_10302596_10302603_+ 0.479899737 0.476609902 0.478254819 0.00232624 CG43143 FBtr0305356|FBtr0337049 10302298|10302298 10302898|10302898 3R + 10302566 10302638 3'utr CG43143 FlyBase G41728.1 AAGGCAGCAGTAGCGCAACCACATTCCCTCAGTACAATGAATATTGTATTATTGTGATTTTGATTTTAAAATT 65 10302589 0.918488346 6 63 438 0.973333333 1.86332286 0.186666667 0.138461538 0.253333333 65 2 0 73 3R:10302566-10302638 8 CG43143 FBtr0337049|FBtr0305356 10302298|10302298 10302898|10302898 AGTACAAT 8mer-m1 dme-miR-305-5p 3R + 10302574 10302638 3'utr CG43143 FlyBase G31490.1 AGTAGCGCAACCACATTCCCTCAGTACAATGAATATTGTATTATTGTGATTTTGATTTTAAAATT 49 10302589 0.93364133 6 47 387 0.970588235 1.51851394 0.161764706 0.265306122 0.470588235 49 1 1 66 3R:10302574-10302638 8 39 2536 FBgn0262617 452.3433333 9.223333333 14.24666667 0.086217696 4.228406216 2.737482452 7 7 7 0.15 dme-miR-999-3p 6mer3-8 AGTTAA 3R 10312110 10312115 - 3R_10312110_10312115_- 0.99502718 0.996150233 0.995588707 0.000794081 Bruce FBtr0331684|FBtr0331682|FBtr0082239|FBtr0331683|FBtr0331681 10312037|10312037|10312037|10312037|10312037 10312643|10312643|10312643|10312643|10312643 3R - 10312093 10312135 3'utr Bruce FlyBase G49875.1 ATGTATGAACGTAGTGATTTAGTTAAATATTGACACAAGAATA 40 10312117 0.890763749 5 36 333 0.918367347 1.352182518 0.142857143 0.225 0.367346939 40 3 1 45 3R:10312093-10312135 6 Bruce FBtr0331681|FBtr0331683|FBtr0082239|FBtr0331682|FBtr0331684 10312037|10312037|10312037|10312037|10312037 10312643|10312643|10312643|10312643|10312643 AGTTAA 6mer3-8 dme-miR-999-3p 3R - 10312101 10312139 3'utr Bruce FlyBase G37702.1 AACTATGTATGAACGTAGTGATTTAGTTAAATATTGACA 18 10312117 0.704239503 4 18 149 1 1.380211242 0.125 0.333333333 0.5 18 0 0 24 3R:10312101-10312139 6 29 2537 FBgn0266717 4248.75 33.1 50.67666667 0.006825537 0.876132931 0.572255476 2 2 2 0.15 dme-miR-965-3p 8mer-A1 TACGCTTA 3R 10360332 10360339 + 3R_10360332_10360339_+ 0.625113961 0.625273811 0.625193886 0.000112996 jumu FBtr0082237 10360257 10361612 3R + 10360291 10360360 3'utr jumu FlyBase G41772.1 ATCAATTAGTTTTAGACCTTTGGCATTTAAGAAACCCATGCTACGCTTAAACGTAATCCTAGAAGCCCCA 54 10360332 0.79811269 7 53 237 1 1.826074803 0.298507463 0.203703704 0.358208955 54 0 0 67 3R:10360291-10360360 8 jumu FBtr0082237 10360257 10361612 TACGCTTA 8mer-A1 dme-miR-965-3p 3R + 10360294 10360355 3'utr jumu FlyBase G31514.1 AATTAGTTTTAGACCTTTGGCATTTAAGAAACCCATGCTACGCTTAAACGTAATCCTAGAAG 55 10360332 0.768103162 8 50 250 0.918604651 1.2955671 0.348837209 0.309090909 0.558139535 55 4 3 79 3R:10360294-10360355 8 45 2538 FBgn0015396 1426.553333 44.76666667 68.68333333 0.031544562 1.005212211 0.655180781 0 0 0 0.15 dme-bantam-3p 7mer-m8 TGATCTC 3R 10360735 10360741 + 3R_10360735_10360741_+ 0.661534249 0.661596777 0.661565513 4.43E-05 jumu FBtr0082237 10360257 10361612 3R + 10360707 10360817 3'utr jumu FlyBase G41776.2 GAGCTGGTTTGAGTTGCAACTTTTGATTTGATCTCCCTACTGACAAATAAATTTTCATCCTTCAATCGATAAGAAACTTGACAATGCATTTATGACAAACGATTCCACGCT 95 10360734 0.769639749 17 90 867 0.946902655 2.029383778 0.088495575 0.147368421 0.283185841 95 6 0 107 3R:10360707-10360817 7 jumu FBtr0082237 10360257 10361612 TGATCTC 7mer-m8 dme-bantam-3p 3R + 10360663 10360815 3'utr jumu FlyBase G31516.1 CCACTGACGACGCATGAAGCATGTTAATACTTTTTACCAGACTCGAGCTGGTTTGAGTTGCAACTTTTGATTTGATCTCCCTACTGACAAATAAATTTTCATCCTTCAATCGATAAGAAACTTGACAATGCATTTATGACAAACGATTCCACG 80 10360734 0.954561351 21 75 714 0.922330097 1.375663614 0.067961165 0.2625 0.427184466 80 5 3 95 3R:10360663-10360815 7 68 2539 FBgn0015396 1426.553333 44.76666667 68.68333333 0.047667338 1.518987342 0.990050959 1 1 1 0.15 dme-miR-8-3p 7mer-m8 CAGTATT 3R 10361004 10361010 + 3R_10361004_10361010_+ 0.643587423 0.638505543 0.641046483 0.003593446 jumu FBtr0082237 10360257 10361612 3R + 10360968 10361027 3'utr jumu FlyBase G41778.1 AATTGAAAGAGAATTGATCACACATACTTGCCGGTCCAGTATTCGTAAGCGAGGTATATT 95 10360997 0.849758722 10 92 592 0.983471074 2.075546961 0.132231405 0.210526316 0.380165289 95 2 0 119 3R:10360968-10361027 7 jumu FBtr0082237 10360257 10361612 CAGTATT 7mer-m8 dme-miR-8-3p 3R + 10360967 10361038 3'utr jumu FlyBase G31517.1 AAATTGAAAGAGAATTGATCACACATACTTGCCGGTCCAGTATTCGTAAGCGAGGTATATTGAGGATTTTTA 73 10360997 0.853718753 11 72 437 0.962616822 2.012837225 0.112149533 0.301369863 0.523364486 73 4 0 103 3R:10360967-10361038 7 72.5 2540 FBgn0015396 1426.553333 44.76666667 68.68333333 0.050821794 1.619508563 1.055569037 7 7 7 0.15 dme-miR-14-3p 6mer3-8 AAGACT 3R 10361265 10361270 + 3R_10361265_10361270_+ 0.952337535 0.960573793 0.956455664 0.005823944 jumu FBtr0082237 10360257 10361612 3R + 10361218 10361339 3'utr jumu FlyBase G41779.1 TGTAAACGAAATCCGAATTCCAAATAATACAAGATACGAAAACCAATAAGACTTAAAAGAAGCGTACCAGACTAATGAACATGATCAGGCCTCAGAAGTAAATAGTACAAAGAGCTAGACTT 141 10361264 0.980647242 12 116 397 0.866666667 1.377184787 0.218181818 0.113475177 0.242424242 141 17 5 143 3R:10361218-10361339 6 jumu FBtr0082237 10360257 10361612 AAGACT 6mer3-8 dme-miR-14-3p 3R + 10361248 10361334 3'utr jumu FlyBase G31519.1 AAGATACGAAAACCAATAAGACTTAAAAGAAGCGTACCAGACTAATGAACATGATCAGGCCTCAGAAGTAAATAGTACAAAGAGCTA 82 10361264 0.947483738 7 67 196 0.879032258 2.037426498 0.346774194 0.37804878 0.588709677 82 15 0 109 3R:10361248-10361334 6 69.5 2541 FBgn0015396 1426.553333 44.76666667 68.68333333 0.048718823 1.552494415 1.011890318 1 1 1 0.15 dme-miR-11-3p 7mer-m1 TGTGATG 3R 10361417 10361423 + 3R_10361417_10361423_+ 0.61197959 0.612060816 0.612020203 5.74E-05 jumu FBtr0082237 10360257 10361612 3R + 10361396 10361509 3'utr jumu FlyBase G41780.1 TTTGTTATTACCCTTTTCTTTTGTGATGCTTCGACTTAGCTTGCGCATTTAACAATTCCATTTACGAACCAGGAACATTTATGCATTTTTTGTTGTAATATTAGCACCTAAATA 52 10361415 0.94948096 19 51 525 0.969230769 1.799340549 0.307692308 0.230769231 0.384615385 52 2 0 63 3R:10361396-10361509 7 jumu FBtr0082237 10360257 10361612 TGTGATG 7mer-m1 dme-miR-11-3p 3R + 10361370 10361556 3'utr jumu FlyBase G31520.1 AGGATGGCTGATGGAATTAAACCGTTTTTGTTATTACCCTTTTCTTTTGTGATGCTTCGACTTAGCTTGCGCATTTAACAATTCCATTTACGAACCAGGAACATTTATGCATTTTTTGTTGTAATATTAGCACCTAAATATTGTATTTAATCATTAAGTGAAGCTCTGTAAATCTTTAAGCTAAGAA 45 10361415 0.991478366 25 41 442 0.921875 1.469822016 0.375 0.311111111 0.515625 45 4 1 59 3R:10361370-10361556 7 22.5 2542 FBgn0015396 1426.553333 44.76666667 68.68333333 0.015772281 0.502606106 0.327590391 2 2 2 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 3R 10361477 10361483 + 3R_10361477_10361483_+ 0.620204229 0.478966302 0.549585265 0.099870277 jumu FBtr0082237 10360257 10361612 3R + 10361396 10361509 3'utr jumu FlyBase G41780.1 TTTGTTATTACCCTTTTCTTTTGTGATGCTTCGACTTAGCTTGCGCATTTAACAATTCCATTTACGAACCAGGAACATTTATGCATTTTTTGTTGTAATATTAGCACCTAAATA 52 10361485 0.94948096 19 51 525 0.969230769 1.799340549 0.307692308 0.230769231 0.384615385 52 2 0 63 3R:10361396-10361509 7 jumu FBtr0082237 10360257 10361612 TGCATTT 7mer-m8 dme-miR-277-3p 3R + 10361370 10361556 3'utr jumu FlyBase G31520.1 AGGATGGCTGATGGAATTAAACCGTTTTTGTTATTACCCTTTTCTTTTGTGATGCTTCGACTTAGCTTGCGCATTTAACAATTCCATTTACGAACCAGGAACATTTATGCATTTTTTGTTGTAATATTAGCACCTAAATATTGTATTTAATCATTAAGTGAAGCTCTGTAAATCTTTAAGCTAAGAA 45 10361484 0.991478366 25 41 442 0.921875 1.469822016 0.375 0.311111111 0.515625 45 4 1 59 3R:10361370-10361556 7 18 2543 FBgn0015396 1426.553333 44.76666667 68.68333333 0.012617825 0.402084885 0.262072313 -8 -7 -7.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 10399396 10399401 + 3R_10399396_10399401_+ 0.999993697 0.999983281 0.999988489 7.35E-06 cwo FBtr0082246|FBtr0082246|FBtr0082246|FBtr0305152|FBtr0305152|FBtr0305152|FBtr0305151|FBtr0305151|FBtr0305151 10399337|10399337|10399337|10399337|10399337|10399337|10399337|10399337|10399337 10400752|10400752|10400752|10400752|10400752|10400752|10400752|10400752|10400752 3R + 10399279 10399422 stop_codon cwo FlyBase G41802.1 GTGGCCGCCGCAGCGGTGGCTAAGGCCAAACTGGAGCAGGCCATGAACCAGAGCTGGTAAAGCAAAGCAATCGCAATGCAATGGGTCGACAGATGGAACAACACTACCTCAGTACTTCTGTGAATAATCATTAAATGATTAATC 78 10399395 0.9785535 14 73 483 0.944444444 1.929418926 0.344444444 0.08974359 0.211111111 78 5 0 85 3R:10399279-10399422 6 cwo FBtr0305151|FBtr0305151|FBtr0305151|FBtr0082246|FBtr0082246|FBtr0082246|FBtr0305152|FBtr0305152|FBtr0305152 10399337|10399337|10399337|10399337|10399337|10399337|10399337|10399337|10399337 10400752|10400752|10400752|10400752|10400752|10400752|10400752|10400752|10400752 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 10399307 10399411 stop_codon cwo FlyBase G31537.1 AACTGGAGCAGGCCATGAACCAGAGCTGGTAAAGCAAAGCAATCGCAATGCAATGGGTCGACAGATGGAACAACACTACCTCAGTACTTCTGTGAATAATCATTA 38 10399395 0.976328673 13 35 224 0.896551724 1.716003344 0.24137931 0.421052632 0.620689655 38 6 0 52 3R:10399307-10399411 6 33 2544 FBgn0259938 1085.47 27.38 41.65666667 0.030401577 1.205259313 0.792190126 1 1 1 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 10399460 10399465 + 3R_10399460_10399465_+ 0.934090007 0.943015445 0.938552726 0.006311211 cwo FBtr0082246|FBtr0305152|FBtr0305151 10399337|10399337|10399337 10400752|10400752|10400752 3R + 10399435 10399478 3'utr cwo FlyBase G41803.1 CACTAAGCGACATCTGCGCCCAAGTGTACCTACATACAAACAGA 59 10399459 0.886641848 3 58 291 0.967741935 1.77815125 0.032258065 0.050847458 0.096774194 59 2 0 60 3R:10399435-10399478 6 cwo FBtr0305151|FBtr0082246|FBtr0305152 10399337|10399337|10399337 10400752|10400752|10400752 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 10399439 10399479 3'utr cwo FlyBase G31538.1 AAGCGACATCTGCGCCCAAGTGTACCTACATACAAACAGAA 20 10399459 0.874813027 2 19 97 0.9375 1.477121255 0 0.4 0.625 20 2 0 30 3R:10399439-10399479 6 39.5 2545 FBgn0259938 1085.47 27.38 41.65666667 0.036389767 1.442658875 0.948227575 1 1 1 0.15 dme-miR-1003-3p 6mer3-8 ATGTGA 3R 10400000 10400005 + 3R_10400000_10400005_+ 0.525052135 0.612520447 0.568786291 0.061849428 cwo FBtr0082246|FBtr0305152|FBtr0305151 10399337|10399337|10399337 10400752|10400752|10400752 3R + 10399922 10400109 3'utr cwo FlyBase G41807.1 GTGCAAGCCGATAGAACGTATATGATGCCAAGAGTCAGTCCCACGTAAAAAATCTAATGGATTTTAAAACAAAACTAAATGTGAATTAAATGTATTTTTAGAGGTTAAACGTTTTTTGCAATTTAAATAAGTGTTGTGGTTTCATATAAGGTAGTCAGATAGCCAAGTGACTCCCGTCAAACAAACAA 156 10400007 0.812963609 22 152 1032 0.974489796 2.281033367 0.290816327 0.192307692 0.357142857 156 5 0 191 3R:10399922-10400109 6 cwo FBtr0305151|FBtr0082246|FBtr0305152 10399337|10399337|10399337 10400752|10400752|10400752 ATGTGA 6mer3-8 dme-miR-1003-3p 3R + 10399933 10400032 3'utr cwo FlyBase G31540.1 TAGAACGTATATGATGCCAAGAGTCAGTCCCACGTAAAAAATCTAATGGATTTTAAAACAAAACTAAATGTGAATTAAATGTATTTTTAGAGGTTAAACG 111 10400007 0.748005682 11 102 645 0.919463087 1.835690571 0.409395973 0.272727273 0.463087248 110 11 1 137 3R:10399933-10400032 6 103.5 2546 FBgn0259938 1085.47 27.38 41.65666667 0.095350401 3.780131483 2.484596303 -7 -7 -7 0.15 dme-miR-283-5p 7mer-A1 GATATTA 3R 10403056 10403062 - 3R_10403056_10403062_- 0.481257341 0.726872621 0.604064981 0.173676244 CG6325 FBtr0082260 10402965 10403647 3R - 10402997 10403076 3'utr CG6325 FlyBase G49960.1 GAACTACGTTTCAAGATATTAAACATAAGAAATACAATTCAAGATATTGTTCAGGAAGTCTCCAGTCCTCTAAAGTAATG 9 10403067 0.923203949 5 9 56 1 1.079181246 0.333333333 0.222222222 0.416666667 9 0 0 12 3R:10402997-10403076 7 CG6325 FBtr0082260 10402965 10403647 GATATTA 7mer-A1 dme-miR-283-5p 3R - 10403034 10403080 3'utr CG6325 FlyBase G37772.2 CTAGGAACTACGTTTCAAGATATTAAACATAAGAAATACAATTCAAG 10 10403067 0.972669318 4 5 42 0.666666667 0.698970004 0 0.3 0.533333333 10 4 1 10 3R:10403034-10403080 7 5 2547 FBgn0037814 441 14.70666667 22.57666667 0.011337868 0.339981868 0.221467592 5 5 5 0.15 dme-miR-8-3p 6mer2-7 AGTATT 3R 10403397 10403402 - 3R_10403397_10403402_- 0.999914601 0.966570931 0.983242766 0.023577556 CG6325 FBtr0082260 10402965 10403647 3R - 10403308 10403479 3'utr CG6325 FlyBase G49962.2 AGTTTTTAGTTTGCAAAACTCGATAAGGTTGCGTGCATCTAGTTCAGTTCTAAACACAAACAACGTGTGCTGTATTTAGTATTTAGTTACCTATACCTTACTTAGTGCAACGAAACGCTTTTCAAAAACATGAAACGCGTCCTTATTTCGACTGAAGTCATTTAAGTAATCT 293 10403414 0.859314629 32 274 2305 0.947513812 2.058172865 0.132596685 0.184300341 0.339779006 293 17 2 343 3R:10403308-10403479 6 CG6325 FBtr0082260 10402965 10403647 AGTATT 6mer2-7 dme-miR-8-3p 3R - 10403309 10403472 3'utr CG6325 FlyBase G37774.1 AGTTTGCAAAACTCGATAAGGTTGCGTGCATCTAGTTCAGTTCTAAACACAAACAACGTGTGCTGTATTTAGTATTTAGTTACCTATACCTTACTTAGTGCAACGAAACGCTTTTCAAAAACATGAAACGCGTCCTTATTTCGACTGAAGTCATTTAAGTAATC 218 10403413 0.884402294 25 212 1702 0.975683891 1.728353782 0.170212766 0.366972477 0.580547112 218 3 5 321 3R:10403309-10403472 6 84.5 2548 FBgn0037814 441 14.70666667 22.57666667 0.191609977 5.745693563 3.742802303 12 11 11.5 0.15 dme-miR-970-3p 7mer-A1 CTTATGA 3R 10766323 10766329 + 3R_10766323_10766329_+ 0.761973897 0.715397044 0.738685471 0.032934842 Cap-H2 FBtr0301310|FBtr0302571|FBtr0301311 10765896|10765896|10765896 10766756|10766756|10766756 3R + 10766297 10766325 3'utr Cap-H2 FlyBase G41830.1 TTAACTTTTTACGACGCTTTTAGTTGCTT 5 10766317 0.684581017 3 5 56 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 3R:10766297-10766325 3 Cap-H2 FBtr0302571|FBtr0301311|FBtr0301310 10765896|10765896|10765896 10766756|10766756|10766756 CTTATGA 7mer-A1 dme-miR-970-3p 3R + 10766295 10766329 3'utr Cap-H2 FlyBase G31562.1 TTTTAACTTTTTACGACGCTTTTAGTTGCTTATGA 6 10766316 0.76784728 2 6 72 1 1.079181246 0.25 0.5 0.75 6 0 0 12 3R:10766295-10766329 7 3 2549 FBgn0037831 545.8533333 16.72666667 25.64 0.005495982 0.179354324 0.11700468 6 7 6.5 0.15 dme-bantam-3p 7mer-m8 TGATCTC 3R 10766554 10766560 + 3R_10766554_10766560_+ 0.355115851 0.443003092 0.399059472 0.062145635 Cap-H2 FBtr0301310|FBtr0302571|FBtr0301311 10765896|10765896|10765896 10766756|10766756|10766756 3R + 10766449 10766688 stop_codon Cap-H2 FlyBase G41832.1 CTATACCTCCTTTGATTTAGAACAAAAATAGACAAATGACTTTTTGATTGACGAAGCGCGTGTTTTGGAAATCCTCATGAGCTGATAGTACTAAATTCAAGTACCTGATCTCGTCTGTACAAAAGTATAAACATAAGAACTCTTCGGACATAAGACAAAGTTCAAGATAAATTAAGGATAAAGTGTATATATACGTATGTATTTACCAGAGTGCAAGCTAGTGTCTATTTACAATCATTT 205 10766554 0.858930827 32 182 1387 0.881355932 1.363820826 0.233050847 0.131707317 0.245762712 205 20 8 208 3R:10766449-10766688 7 Cap-H2 FBtr0302571|FBtr0301311|FBtr0301310 10765896|10765896|10765896 10766756|10766756|10766756 TGATCTC 7mer-m8 dme-bantam-3p 3R + 10766467 10766744 stop_codon Cap-H2 FlyBase G31563.1 AGAACAAAAATAGACAAATGACTTTTTGATTGACGAAGCGCGTGTTTTGGAAATCCTCATGAGCTGATAGTACTAAATTCAAGTACCTGATCTCGTCTGTACAAAAGTATAAACATAAGAACTCTTCGGACATAAGACAAAGTTCAAGATAAATTAAGGATAAAGTGTATATATACGTATGTATTTACCAGAGTGCAAGCTAGTGTCTATTTACAATCATTTTAAGATATAATGTTTTTTTCGTAAGTATAACGTGTAGTTCTTAAGGAATAAAACGG 153 10766555 0.983348056 33 136 1043 0.8647343 1.349763044 0.173913043 0.287581699 0.473429952 153 21 7 179 3R:10766467-10766744 7 113.5 2550 FBgn0037831 545.8533333 16.72666667 25.64 0.207931312 6.785571941 4.426677067 0 -1 -0.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 10786616 10786621 - 3R_10786616_10786621_- 0.992539632 0.999999141 0.996269387 0.005274663 Art1 FBtr0082304 10786479 10786765 3R - 10786566 10786639 3'utr Art1 FlyBase G50013.1 TTCTCCTAAGTTTAAAGTGTACCTTTGTTAGTATACATAATATTTTACACTCGTGCGCCTGTTTAAATTATTAT 43 10786622 0.886610587 4 42 430 0.980392157 1.397940009 0.058823529 0.162790698 0.294117647 43 0 1 50 3R:10786566-10786639 6 Art1 FBtr0082304 10786479 10786765 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 10786566 10786684 3'utr Art1 FlyBase G37813.1 AAGGTTTATTCCAGTGCGAAATGTGCAACGAATTCGTGTTGCGTCTTCTCCTAAGTTTAAAGTGTACCTTTGTTAGTATACATAATATTTTACACTCGTGCGCCTGTTTAAATTATTAT 42 10786622 0.98844668 10 38 386 0.948275862 1.740362689 0.068965517 0.357142857 0.534482759 42 3 0 55 3R:10786566-10786684 6 36 2551 FBgn0037834 664.3333333 53.06 81.07333333 0.054189664 0.678477196 0.444042431 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 10817146 10817151 + 3R_10817146_10817151_+ 0.999938891 0.999960312 0.999949601 1.51E-05 CG4089 FBtr0082281|FBtr0082281|FBtr0082281 10817111|10817111|10817111 10817490|10817490|10817490 3R + 10817120 10817177 3'utr CG4089 FlyBase G41844.1 TAATTATCTTCTTATGTAAATACTTACTGTGACATGGTAACCTCTTATGCTCAGCATT 21 10817144 0.887322493 6 21 150 1 1.342422681 0.045454545 0.047619048 0.090909091 21 0 0 22 3R:10817120-10817177 6 CG4089 FBtr0082281|FBtr0082281|FBtr0082281 10817111|10817111|10817111 10817490|10817490|10817490 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 10817129 10817188 3'utr CG4089 FlyBase G31575.1 TCTTATGTAAATACTTACTGTGACATGGTAACCTCTTATGCTCAGCATTAGTTAATTGGC 19 10817144 0.982143272 9 19 132 1 1.491361694 0.225806452 0.421052632 0.64516129 19 0 0 31 3R:10817129-10817188 6 16.5 2552 FBgn0037838 56.27 3.373333333 5.153333333 0.293229074 4.891304348 3.201811125 2 2 2 0.15 dme-miR-184-3p 6mer2-7 CCGTCC 3R 10817322 10817327 + 3R_10817322_10817327_+ 0.617214269 0.896362576 0.756788422 0.197387656 CG4089 FBtr0082281 10817111 10817490 3R + 10817273 10817344 3'utr CG4089 FlyBase G41845.1 ATGGAAACCATCTAGACACTTTGGCAATGAAACATGTACAAATACAAAACCGTCCTTAAATTATTTTAAATT 44 10817328 0.700613459 10 41 237 0.964912281 1.740362689 0.087719298 0.25 0.421052632 44 2 0 55 3R:10817273-10817344 6 CG4089 FBtr0082281 10817111 10817490 CCGTCC 6mer2-7 dme-miR-184-3p 3R + 10817303 10817342 3'utr CG4089 FlyBase G31576.1 AACATGTACAAATACAAAACCGTCCTTAAATTATTTTAAA 33 10817328 0.645402574 5 30 144 0.960784314 1.213074825 0 0.393939394 0.607843137 33 0 2 49 3R:10817303-10817342 6 30 2553 FBgn0037838 56.27 3.373333333 5.153333333 0.533143771 8.893280632 5.821474774 -6 -6 -6 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 10856097 10856102 + 3R_10856097_10856102_+ 0.999984878 0.999999609 0.999992244 1.04E-05 CG4511 FBtr0302202|FBtr0082286 10855766|10855766 10856412|10856412 3R + 10856080 10856121 3'utr CG4511 FlyBase G41852.2 TAAGCGAACTCAAAATTTGATCTTTATGGTATTTGCAATTCC 37 10856096 0.671803122 10 37 337 1 1.602059991 0.375 0.081081081 0.15 37 0 0 40 3R:10856080-10856121 6 CG4511 FBtr0302202|FBtr0082286 10855766|10855766 10856412|10856412 TGATCT 6mer3-8 dme-bantam-3p 3R + 10856072 10856115 3'utr CG4511 FlyBase G31583.1 AGCGAGCTTAAGCGAACTCAAAATTTGATCTTTATGGTATTTGC 31 10856096 0.945136748 7 31 256 1 1.69019608 0.183673469 0.419354839 0.632653061 31 0 0 49 3R:10856072-10856115 6 31.5 2554 FBgn0037843 1348.566667 118.0666667 181.7 0.023358133 0.266798419 0.173362686 1 1 1 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 10857909 10857914 + 3R_10857909_10857914_+ 0.999972231 0.999512651 0.999742441 0.000324916 CG4570 FBtr0082287 10857844 10858066 3R + 10857890 10857920 3'utr CG4570 FlyBase G41860.1 TTGAAAATAACGACGTTCATGATCTTGTTTA 12 10857909 0.681254338 4 12 101 1 1.278753601 0 0.416666667 0.631578947 12 0 0 19 3R:10857890-10857920 6 CG4570 FBtr0082287 10857844 10858066 TGATCT 6mer3-8 dme-bantam-3p 3R + 10857897 10857922 3'utr CG4570 FlyBase G31587.1 TAACGACGTTCATGATCTTGTTTAAT 8 10857917 0.572137203 4 8 65 1 1.113943352 0 0.25 0.538461538 8 0 0 13 3R:10857897-10857922 6 10 2555 FBgn0037844 66 6.4 9.756666667 0.151515152 1.5625 1.024940212 0 -8 -4 0.15 dme-miR-92b-3p 7mer-A1 TGCAATA 3R 10870323 10870329 + 3R_10870323_10870329_+ 0.718144267 0.614193585 0.666168926 0.073504245 Tsp86D FBtr0330150|FBtr0082288 10870039|10869964 10870555|10870555 3R + 10870258 10870368 3'utr Tsp86D FlyBase G41868.1 AAACGTCAGCGCATTCTTAGTCACAAGTAAAGTCGAACACATCTAAAGTTTTACTCTTATACGTATGCAATATCAGACTATTTAAAAGACACTTGTGTATAAGCTAGCGAG 22 10870338 0.968045905 7 22 128 1 1.447158031 0.357142857 0.272727273 0.428571429 22 0 0 28 3R:10870258-10870368 7 Tsp86D FBtr0082288|FBtr0330150 10869964|10870039 10870555|10870555 TGCAATA 7mer-A1 dme-miR-92b-3p 3R + 10870286 10870434 3'utr Tsp86D FlyBase G31594.1 AAAGTCGAACACATCTAAAGTTTTACTCTTATACGTATGCAATATCAGACTATTTAAAAGACACTTGTGTATAAGCTAGCGAGTTCCATAAGAAATATGCATTTAAAATGAGATTTATATGTAACGACGAAACCAAAACTGCATGCATG 38 10870338 0.979473894 19 36 243 0.964912281 1.740362689 0.280701754 0.394736842 0.596491228 38 2 0 55 3R:10870286-10870434 7 11 2556 FBgn0037848 356.0066667 24.29333333 37.27666667 0.030898298 0.452799122 0.295090763 -15 -15 -15 0.15 dme-miR-965-3p 7mer-m8 TACGCTT 3R 10895356 10895362 + 3R_10895356_10895362_+ 0.619989776 0.620028814 0.620009295 2.76E-05 Leash FBtr0082325 10895233 10896418 3R + 10895340 10895443 3'utr Leash FlyBase G41875.1 TATATCCTAGACCTTCTACGCTTCGAGCACAAACCATATGCAAATTGTGCACAAATCAAGTTATACGCTGATATACCCTATTTATGTTTACCTTTGATTTCACC 39 10895356 0.848308308 12 37 240 0.941176471 1.204119983 0.058823529 0.205128205 0.392156863 39 1 2 48 3R:10895340-10895443 7 Leash FBtr0082325 10895233 10896418 TACGCTT 7mer-m8 dme-miR-965-3p 3R + 10895339 10895376 3'utr Leash FlyBase G31600.1 ATATATCCTAGACCTTCTACGCTTCGAGCACAAACCAT 17 10895356 0.950258499 3 17 84 1 1.380211242 0.291666667 0.235294118 0.458333333 17 0 0 24 3R:10895339-10895376 7 21 2557 FBgn0037856 180.5566667 6.93 10.65333333 0.116306977 3.03030303 1.971214018 0 0 0 0.15 dme-miR-79-3p 7mer-A1 AGCTTTA 3R 10896174 10896180 + 3R_10896174_10896180_+ 0.806671222 0.81705998 0.811865601 0.007345991 Leash FBtr0082325 10895233 10896418 3R + 10896148 10896196 3'utr Leash FlyBase G41878.1 AGACGCGAAGAATCAATGAATCAATAAGCTTTAGTGCCTCTGTATGATG 62 10896172 0.889442763 3 61 445 0.984848485 1.812913357 0.575757576 0.064516129 0.121212121 62 1 0 65 3R:10896148-10896196 7 Leash FBtr0082325 10895233 10896418 AGCTTTA 7mer-A1 dme-miR-79-3p 3R + 10896149 10896199 3'utr Leash FlyBase G31604.1 GACGCGAAGAATCAATGAATCAATAAGCTTTAGTGCCTCTGTATGATGAAC 33 10896172 0.886276381 5 33 243 1 1.672097858 0.446808511 0.333333333 0.531914894 33 0 0 47 3R:10896149-10896199 7 47 2558 FBgn0037856 180.5566667 6.93 10.65333333 0.26030609 6.782106782 4.411764706 2 2 2 0.15 "dme-miR-995-3p,dme-miR-998-3p" 6mer2-7 GGTGCT 3R 10896323 10896328 + 3R_10896323_10896328_+ 0.92409833 0.986367681 0.955233006 0.044031115 Leash FBtr0082325 10895233 10896418 3R + 10896302 10896340 3'utr Leash FlyBase G41879.1 ACGATCAAACGATTTCGTTAAGGTGCTTTACAAATCACT 18 10896329 0.764825833 2 16 138 0.869565217 0.823908741 0.086956522 0.277777778 0.434782609 18 1 2 20 3R:10896302-10896340 6 Leash FBtr0082325 10895233 10896418 GGTGCT 6mer2-7 "dme-miR-995-3p,dme-miR-998-3p" 3R + 10896302 10896337 3'utr Leash FlyBase G31605.1 ACGATCAAACGATTTCGTTAAGGTGCTTTACAAATC 13 10896329 0.936913917 3 12 109 0.857142857 0.653212514 0 0.538461538 0.714285714 13 0 3 18 3R:10896302-10896337 6 15 2559 FBgn0037856 180.5566667 6.93 10.65333333 0.083076412 2.164502165 1.408010013 -6 -6 -6 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 11170840 11170845 - 3R_11170840_11170845_- 0.586568482 0.553710377 0.570139429 0.023234185 Ugt35a FBtr0082374|FBtr0082374|FBtr0082374 11170815|11170815|11170815 11170943|11170943|11170943 3R - 11170826 11170880 3'utr Ugt35a FlyBase G50060.1 AGTAAACATTTGCATTTTTGTTTTGTTACCAGCACCTGTGAATTAATTTTTAAAT 37 11170838 0.983040076 7 36 297 0.976190476 1.311753861 0.357142857 0.135135135 0.238095238 37 0 1 41 3R:11170826-11170880 6 Ugt35a FBtr0082374|FBtr0082374|FBtr0082374 11170815|11170815|11170815 11170943|11170943|11170943 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 11170825 11170924 3'utr Ugt35a FlyBase G37853.1 TGTTTGAGTTCATGCCGCCACCGACTTATGTTTCCTCTTAGAGCAGTAAACATTTGCATTTTTGTTTTGTTACCAGCACCTGTGAATTAATTTTTAAATA 34 11170838 0.755976696 10 34 246 1 1.698970004 0.34 0.382352941 0.58 34 0 0 50 3R:11170825-11170924 6 28.5 2560 FBgn0026315 870 59.03666667 89.87 0.032758621 0.482750833 0.317124736 -7 -7 -7 0.15 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 11212513 11212518 - 3R_11212513_11212518_- 0.996512869 0.994653335 0.995583102 0.001314936 ZnT86D FBtr0082371 11212306 11212867 3R - 11212499 11212537 3'utr ZnT86D FlyBase G50069.1 AAGCTAAGCGAAAGATTTTGTGCAAAGGTAAATATAAAT 7 11212520 0.839247432 3 6 35 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 3R:11212499-11212537 6 ZnT86D FBtr0082371 11212306 11212867 GTGCAA 6mer3-8 dme-miR-92b-3p 3R - 11212509 11212550 3'utr ZnT86D FlyBase G37860.1 TTAGTGTAATTGTAAGCTAAGCGAAAGATTTTGTGCAAAGGT 6 11212520 0.622986519 4 6 33 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 3R:11212509-11212550 6 4.5 2561 FBgn0037875 198.6666667 12.00333333 18.26333333 0.022651007 0.374895862 0.246395328 2 2 2 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 11212826 11212831 - 3R_11212826_11212831_- 0.906778356 0.935501067 0.921139711 0.020310016 ZnT86D FBtr0082371 11212306 11212867 3R - 11212811 11212859 3'utr ZnT86D FlyBase G50071.1 GGATCGACCCACCGGTGTCCTTGTACAATGATCTGTATAGTTATCAGCG 27 11212831 0.987790576 6 26 247 0.965517241 1.447158031 0.206896552 0.074074074 0.137931034 27 1 0 28 3R:11212811-11212859 6 ZnT86D FBtr0082371 11212306 11212867 TGATCT 6mer3-8 dme-bantam-3p 3R - 11212812 11212859 3'utr ZnT86D FlyBase G37862.1 GGATCGACCCACCGGTGTCCTTGTACAATGATCTGTATAGTTATCAGC 23 11212831 0.989071878 6 19 185 0.838709677 1.113943352 0.225806452 0.260869565 0.451612903 23 4 1 26 3R:11212812-11212859 6 24.5 2562 FBgn0037875 198.6666667 12.00333333 18.26333333 0.123322148 2.041099695 1.341485673 0 0 0 0.15 dme-miR-2a-2-5p 7mer-m1 GATGAGG 3R 11223253 11223259 + 3R_11223253_11223259_+ 0.822474786 0.825541984 0.824008385 0.002168838 RpL3 FBtr0302586 11223138 11224944 3R + 11223193 11223269 3'utr RpL3 FlyBase G41912.1 AAATTGCCTGACGAGTGAGCATGACAAGGAAGACTGCATCTCCGCTCGCCATTCGTTTGCGATGAGGCGCACTTCCT 10 11223249 0.95222705 7 10 48 1 1.113943352 0.076923077 0.3 0.461538462 10 0 0 13 3R:11223193-11223269 7 RpL3 FBtr0302586 11223138 11224944 GATGAGG 7mer-m1 dme-miR-2a-2-5p 3R + 11223223 11223264 3'utr RpL3 FlyBase G31633.1 AGACTGCATCTCCGCTCGCCATTCGTTTGCGATGAGGCGCAC 7 11223249 0.966904424 4 7 36 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 3R:11223223-11223264 7 6 2563 FBgn0020910 9247.463333 756.2966667 1140.143333 0.000648827 0.007933395 0.005262496 4 4 4 0.15 dme-bantam-3p 7mer-m8 TGATCTC 3R 11223446 11223452 + 3R_11223446_11223452_+ 0.638878593 0.640790112 0.639834352 0.001351635 RpL3 FBtr0302586 11223138 11224944 3R + 11223399 11223529 3'utr RpL3 FlyBase G41913.1 AAGAGCAAGAAGAAGGCATTCACCAAGGCCAGCAAGAAGTGGACCGATGATCTCGGCAAGAAGAGCATCGAGAATGACTTCCGCAAGATGCTGCGCTACTGCAAGGTGATCCGTGTGATTGCCCACTCGCA 144 11223446 0.92949195 14 142 493 0.988372093 1.929418926 0.168604651 0.166666667 0.302325581 144 1 1 170 3R:11223399-11223529 7 RpL3 FBtr0302586 11223138 11224944 TGATCTC 7mer-m8 dme-bantam-3p 3R + 11223422 11223530 3'utr RpL3 FlyBase G31634.1 CAAGGCCAGCAAGAAGTGGACCGATGATCTCGGCAAGAAGAGCATCGAGAATGACTTCCGCAAGATGCTGCGCTACTGCAAGGTGATCCGTGTGATTGCCCACTCGCAG 97 11223446 0.928367373 12 95 360 0.978571429 2.136720567 0.307142857 0.329896907 0.535714286 97 3 0 137 3R:11223422-11223530 7 89.5 2564 FBgn0020910 9247.463333 756.2966667 1140.143333 0.00967833 0.118339805 0.078498902 0 0 0 0.15 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3R 11224118 11224123 + 3R_11224118_11224123_+ 0.999942447 0.988568119 0.994255283 0.008042845 RpL3 FBtr0302586 11223138 11224944 3R + 11224093 11224143 3'utr RpL3 FlyBase G41916.1 AGGGTCTGCGCAAGGTGGCCTGTATTGGTGCCTGGCATCCGTCGCGTGTGT 10 11224118 0.724960622 7 10 61 1 1.041392685 0.272727273 0.1 0.181818182 10 0 0 11 3R:11224093-11224143 6 RpL3 FBtr0302586 11223138 11224944 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3R + 11224099 11224170 3'utr RpL3 FlyBase G31636.1 TGCGCAAGGTGGCCTGTATTGGTGCCTGGCATCCGTCGCGTGTGTCCACCACCGTGGCCCGTGCCGGTCAGA 14 11224118 0.980073277 6 12 83 0.863636364 1.278753601 0.181818182 0.428571429 0.636363636 14 3 0 19 3R:11224099-11224170 6 10 2565 FBgn0020910 9247.463333 756.2966667 1140.143333 0.001081378 0.013222325 0.008770827 0 0 0 0.15 dme-miR-988-3p 6mer2-7 CAAGGG 3R 11224598 11224603 + 3R_11224598_11224603_+ 0.852396765 0.999632102 0.926014434 0.104111079 RpL3 FBtr0302586 11223138 11224944 3R + 11224497 11224653 3'utr RpL3 FlyBase G41920.1 AAGAACAACGCCTCCACCGAGTACGATCTGACCGACAAGAGCATCACGCCCATGGGTGGCTTCCCCCACTACGGTGAGGTCAACAACGACTTCGTCATGATCAAGGGCTGCTGCATCGGCTCCAAGAAGCGCATCATCACCCTGCGCAAGTCCCTGC 53 11224594 0.902783806 16 45 251 0.859649123 1.088136089 0.210526316 0.075471698 0.140350877 53 5 3 49 3R:11224497-11224653 6 RpL3 FBtr0302586 11223138 11224944 CAAGGG 6mer2-7 dme-miR-988-3p 3R + 11224533 11224658 3'utr RpL3 FlyBase G31639.1 AAGAGCATCACGCCCATGGGTGGCTTCCCCCACTACGGTGAGGTCAACAACGACTTCGTCATGATCAAGGGCTGCTGCATCGGCTCCAAGAAGCGCATCATCACCCTGCGCAAGTCCCTGCTGAAG 27 11224594 0.827723025 9 23 121 0.853658537 0.942008053 0.56097561 0.37037037 0.585365854 27 3 3 35 3R:11224533-11224658 6 18.5 2566 FBgn0020910 9247.463333 756.2966667 1140.143333 0.002000549 0.0244613 0.01622603 4 4 4 0.15 dme-miR-980-3p 6mer2-7 GCAGCT 3R 11230719 11230724 - 3R_11230719_11230724_- 0.999970631 0.999974231 0.999972431 2.55E-06 CG17187 FBtr0082365 11230615 11230808 3R - 11230701 11230738 3'utr CG17187 FlyBase G50088.1 AATTTAGCAACTATGCAGCTGATTTATAATACATTTAC 22 11230726 0.833959911 4 22 145 1 1.556302501 0 0.363636364 0.611111111 22 0 0 36 3R:11230701-11230738 6 CG17187 FBtr0082365 11230615 11230808 GCAGCT 6mer2-7 dme-miR-980-3p 3R - 11230709 11230738 3'utr CG17187 FlyBase G37874.1 AATTTAGCAACTATGCAGCTGATTTATAAT 28 11230726 0.78404609 5 28 170 1 1.62324929 0 0.321428571 0.547619048 28 0 0 42 3R:11230709-11230738 6 25 2567 FBgn0037882 159.3333333 15.59 23.78333333 0.156903766 1.603592046 1.051156272 2 2 2 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3R 11232501 11232507 - 3R_11232501_11232507_- 0.82334432 0.823349327 0.823346824 3.54E-06 Arfip FBtr0082364 11232427 11233081 3R - 11232455 11232538 3'utr Arfip FlyBase G50091.1 CGAGCTTGCATAATTTGAAATCATTGTTTTACTAGTCATCGTATTATTTACACTAAAATGAAGTCTATATATATATAAAAATAT 59 11232511 0.825922262 16 53 630 0.922077922 1.851258349 0.077922078 0.271186441 0.441558442 59 6 0 71 3R:11232455-11232538 7 Arfip FBtr0082364 11232427 11233081 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R - 11232460 11232550 3'utr Arfip FlyBase G37877.1 AAACTGTTTTTGCGAGCTTGCATAATTTGAAATCATTGTTTTACTAGTCATCGTATTATTTACACTAAAATGAAGTCTATATATATATAAA 54 11232510 0.800969827 19 47 529 0.91011236 1.607455023 0.224719101 0.462962963 0.674157303 54 7 1 81 3R:11232460-11232550 7 43.5 2568 FBgn0037884 616.2333333 37.68 58.01666667 0.070590144 1.154458599 0.749784545 4 3 3.5 0.15 dme-miR-968-5p 6mer3-8 ACTACT 3R 11232764 11232769 - 3R_11232764_11232769_- 0.999999808 0.989855774 0.994927791 0.007172891 Arfip FBtr0082364 11232427 11233081 3R - 11232724 11232783 3'utr Arfip FlyBase G50094.1 ATGTAACTCGCTGTACTACTCACATTTCCACAGCTGGTACGCTGACGTTCCTTTAACTTG 8 11232760 0.963007183 6 7 57 0.875 0.84509804 0 0 0 8 1 0 7 3R:11232724-11232783 6 Arfip FBtr0082364 11232427 11233081 ACTACT 6mer3-8 dme-miR-968-5p 3R - 11232759 11232800 3'utr Arfip FlyBase G37879.1 CAACCGCTTTCCATTGTATGTAACTCGCTGTACTACTCACAT 7 11232772 0.976346405 3 6 43 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3R:11232759-11232800 6 5.5 2569 FBgn0037884 616.2333333 37.68 58.01666667 0.008925191 0.14596603 0.094800345 -9 3 -3 0.15 dme-miR-8-3p 6mer3-8 CAGTAT 3R 11232927 11232932 - 3R_11232927_11232932_- 0.997486169 0.997226263 0.997356216 0.000183777 Arfip FBtr0082364 11232427 11233081 3R - 11232808 11232954 3'utr Arfip FlyBase G50095.1 AAGATCGGTGGCAGAGATGATTCAGTATGCGATGCAGTGGACAGAAACACTGCATGGCGAACCATAACAATATTTTCGTGCTAAGTTTAAGTCGAATTCCTAAGCCGTAAGCAGAAAGTGAGAGTGGTAGGTGTATGTTATTTATAT 83 11232934 0.979877153 13 74 527 0.888888889 1.903089987 0.3 0.084337349 0.155555556 83 10 0 80 3R:11232808-11232954 6 Arfip FBtr0082364 11232427 11233081 CAGTAT 6mer3-8 dme-miR-8-3p 3R - 11232876 11232953 3'utr Arfip FlyBase G37880.1 AGATCGGTGGCAGAGATGATTCAGTATGCGATGCAGTGGACAGAAACACTGCATGGCGAACCATAACAATATTTTCGT 66 11232934 0.981257469 8 58 418 0.894117647 1.403692338 0.552941176 0.212121212 0.388235294 66 7 2 76 3R:11232876-11232953 6 66 2570 FBgn0037884 616.2333333 37.68 58.01666667 0.107102288 1.751592357 1.137604137 2 2 2 0.15 dme-miR-283-5p 8mer-A1 TGATATTA 3R 11240079 11240086 + 3R_11240079_11240086_+ 0.39607166 0.584672726 0.490372193 0.133361046 CG31388 FBtr0304709|FBtr0082356 11238876|11240036 11240114|11240114 3R + 11240051 11240114 3'utr CG31388 FlyBase G41936.1 AGTTGCATGTTAATTATATATACCGAATTGATATTAATAAAGCTTCCGTTCCGCGTTCATGTTT 28 11240078 0.856489537 4 26 256 0.931034483 1.431363764 0.103448276 0.035714286 0.068965517 28 2 0 27 3R:11240051-11240114 8 CG31388 FBtr0082356|FBtr0304709 11240036|11238876 11240114|11240114 TGATATTA 8mer-A1 dme-miR-283-5p 3R + 11240051 11240109 3'utr CG31388 FlyBase G31650.1 AGTTGCATGTTAATTATATATACCGAATTGATATTAATAAAGCTTCCGTTCCGCGTTCA 20 11240078 0.981645834 2 20 150 1 1.531478917 0.323529412 0.5 0.705882353 20 0 0 34 3R:11240051-11240109 8 22.5 2571 FBgn0051388 90 7.313333333 11.29666667 0.25 3.07657247 1.991737976 1 1 1 0.15 dme-miR-283-5p 7mer-m8 TGATATT 3R 11242319 11242325 - 3R_11242319_11242325_- 0.571293285 0.575592234 0.57344276 0.003039781 CG17734 FBtr0082361|FBtr0082360|FBtr0308073 11242206|11242206|11242206 11242819|11242541|11243554 3R - 11242263 11242351 3'utr CG17734 FlyBase G50101.2 CAGTTTTGTAAACCTGCGTAAGATTGTGATATTGTGTGTTTTAATGTACAAGTTGAACATCCAAACGAAAGCTGTCGAAGCAGACGACA 85 11242328 0.97097103 9 79 680 0.920353982 1.318063335 0.513274336 0.282352941 0.460176991 85 5 4 104 3R:11242263-11242351 7 CG17734 FBtr0308073|FBtr0082360|FBtr0082361 11242206|11242206|11242206 11243554|11242541|11242819 TGATATT 7mer-m8 dme-miR-283-5p 3R - 11242305 11242343 3'utr CG17734 FlyBase G37885.1 TAAACCTGCGTAAGATTGTGATATTGTGTGTTTTAATGT 47 11242328 0.702732431 7 44 389 0.914285714 1.329058719 0.428571429 0.446808511 0.628571429 47 4 2 64 3R:11242305-11242343 7 63 2572 FBgn0037890 228.3333333 38.00666667 58.52666667 0.275912409 1.657603929 1.076432395 3 3 3 0.15 dme-miR-184-5p 6mer3-8 TGATAA 3R 11348467 11348472 - 3R_11348467_11348472_- 0.999969468 0.999999613 0.99998454 2.13E-05 KP78a FBtr0301426 11346292 11348527 3R - 11348429 11348519 5'utr KP78a FlyBase G50109.1 CGGGTTGTTTGGGGCAATGTCAAGGTGATAGAGATAGAATGATAGAGTGATAAAGAAAGTGATACAGTCGGCCCTGACCGAGCATTCTAAC 42 11348445 0.962122559 11 34 173 0.803921569 1.135662602 0.215686275 0.214285714 0.352941176 42 8 2 41 3R:11348429-11348519 6 KP78a FBtr0301426 11346292 11348527 TGATAA 6mer3-8 dme-miR-184-5p 3R - 11348434 11348509 5'utr KP78a FlyBase G37890.1 GGGGCAATGTCAAGGTGATAGAGATAGAATGATAGAGTGATAAAGAAAGTGATACAGTCGGCCCTGACCGAGCATT 40 11348474 0.96677576 9 30 159 0.803278689 1.213074825 0.295081967 0.4 0.606557377 40 10 2 49 3R:11348434-11348509 6 28 2573 FBgn0026064 259.0966667 6.236666667 9.53 0.108067774 4.489577766 2.938090241 -27 2 -12.5 0.15 dme-miR-184-5p 8mer-m1 TGATAAGG 3R 11465776 11465783 + 3R_11465776_11465783_+ 0.607435142 0.609585255 0.608510199 0.001520421 CG17230 FBtr0339376 11465566 11467372 3R + 11465758 11465812 3'utr CG17230 FlyBase G41998.1 ACTATGTGCACTTGTAGTTGATAAGGCTGATAGATAGGCGCACCCCCCTACCCCC 134 11465779 0.864715658 4 129 891 0.966442953 2.158362492 0.167785235 0.089552239 0.181208054 134 5 0 144 3R:11465758-11465812 8 CG17230 FBtr0339376 11465566 11467372 TGATAAGG 8mer-m1 dme-miR-184-5p 3R + 11465748 11465807 3'utr CG17230 FlyBase G31687.1 AGCGAACACCACTATGTGCACTTGTAGTTGATAAGGCTGATAGATAGGCGCACCCCCCTA 85 11465779 0.856076045 5 81 552 0.96350365 2.120573931 0.328467153 0.423529412 0.642335766 85 5 0 132 3R:11465748-11465807 8 106.5 2574 FBgn0046225 82.24 4.006666667 6.103333333 1.294990272 26.58069884 17.44948116 -3 -3 -3 0.15 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 11466578 11466585 + 3R_11466578_11466585_+ 0.63095245 0.630884412 0.630918431 4.82E-05 CG17230 FBtr0339376 11465566 11467372 3R + 11466561 11466601 3'utr CG17230 FlyBase G41999.1 TGATATCTGCATTTGTTTCCGTCCAGAGTCGAGCCATCGAA 38 11466577 0.71232571 2 37 301 0.975609756 1.602059991 0.097560976 0.078947368 0.146341463 38 1 0 40 3R:11466561-11466601 8 CG17230 FBtr0339376 11465566 11467372 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R + 11466562 11466597 3'utr CG17230 FlyBase G31688.1 GATATCTGCATTTGTTTCCGTCCAGAGTCGAGCCAT 14 11466577 0.700897143 2 14 113 1 1.322219295 0.142857143 0.5 0.666666667 14 0 0 21 3R:11466562-11466597 8 26 2575 FBgn0046225 82.24 4.006666667 6.103333333 0.31614786 6.489184692 4.259967231 1 1 1 0.15 dme-miR-92b-3p 7mer-A1 TGCAATA 3R 11560055 11560061 - 3R_11560055_11560061_- 0.739520311 0.775589082 0.757554696 0.025504493 sea FBtr0100462|FBtr0100465|FBtr0100461|FBtr0100464 11559894|11559894|11559894|11559894 11560164|11560164|11560164|11560164 3R - 11559961 11560111 3'utr sea FlyBase G50134.1 AAACCCACTCGTGCATTTTCCTCTGTTCCCATTGTTCCCTAGTCGACTGTTGCAATAGTTTCTAGTTTTGTGACATATTCCAAGAAAGCATTTTATATACACTCTATACCCGCAATGGGTAAGTGGCTATAGAAATTATACAGCTTGTTTT 43 11560062 0.985722729 20 43 362 1 1.707570176 0.176470588 0.186046512 0.31372549 43 0 0 51 3R:11559961-11560111 7 sea FBtr0100461|FBtr0100464|FBtr0100462|FBtr0100465 11559894|11559894|11559894|11559894 11560164|11560164|11560164|11560164 TGCAATA 7mer-A1 dme-miR-92b-3p 3R - 11560028 11560114 3'utr sea FlyBase G37915.1 AAAAAACCCACTCGTGCATTTTCCTCTGTTCCCATTGTTCCCTAGTCGACTGTTGCAATAGTTTCTAGTTTTGTGACATATTCCAAG 20 11560062 0.988905702 10 18 173 0.923076923 1.380211242 0.115384615 0.3 0.461538462 20 2 0 24 3R:11560028-11560114 7 20 2576 FBgn0037912 356.1766667 26.12 39.85 0.05615191 0.765696784 0.501882058 1 1 1 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 11575748 11575753 + 3R_11575748_11575753_+ 0.995738113 0.993769443 0.994753778 0.001392081 Mrp4 FBtr0302027 11575669 11575937 3R + 11575633 11575845 lincRNA_intron-lincRNA_exon Mrp4 FlyBase G42027.1 AGGCTCATTTGGAATCAATGAAACCGAAATCGGAGTAGATTAAGCATCTGGTTATTGGTTACTAAACTGGGAGCCAACAAGGTCTCATTTCCTGGCTGTAAGCGTCTTCAAAGTTGTACCTAATCCAGTCAGCTGCATTTAAGCTAGTTTTCTACTTAAAGTATTATGCCTTCGAACCGTACATACTTGTATAACTCAATCCTTATAGATATA 573 11575724 0.838123886 37 543 4331 0.951145038 2.016336796 0.198473282 0.115183246 0.225954198 573 27 5 623 3R:11575633-11575845 6 Mrp4 FBtr0302027 11575669 11575937 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 11575633 11575849 lincRNA_intron-lincRNA_exon Mrp4 FlyBase G31713.1 AGGCTCATTTGGAATCAATGAAACCGAAATCGGAGTAGATTAAGCATCTGGTTATTGGTTACTAAACTGGGAGCCAACAAGGTCTCATTTCCTGGCTGTAAGCGTCTTCAAAGTTGTACCTAATCCAGTCAGCTGCATTTAAGCTAGTTTTCTACTTAAAGTATTATGCCTTCGAACCGTACATACTTGTATAACTCAATCCTTATAGATATACTAT 380 11575724 0.765042843 42 364 2866 0.955035971 2.424064525 0.284172662 0.339473684 0.548561151 380 24 1 531 3R:11575633-11575849 6 173 2577 FBgn0263316 1433.733333 36.35333333 55.55 0.120664001 4.75884834 3.114311431 24 24 24 0.15 dme-miR-92b-3p 6mer2-7 TGCAAT 3R 11584842 11584847 + 3R_11584842_11584847_+ 0.964601081 0.999909842 0.982255461 0.024967021 wkd FBtr0082413|FBtr0082414 11584642|11584642 11585305|11585305 3R + 11584809 11584867 3'utr wkd FlyBase G42036.1 AGTTGGTCAGTCAATTACGGAGACATCATTCCATGCAATCAGTTTGCTAATTTTAAGAC 10 11584837 0.972611558 4 9 59 1 1 0 0 0 10 0 0 10 3R:11584809-11584867 6 wkd FBtr0082413|FBtr0082414 11584642|11584642 11585305|11585305 TGCAAT 6mer2-7 dme-miR-92b-3p 3R + 11584825 11584860 3'utr wkd FlyBase G31717.1 ACGGAGACATCATTCCATGCAATCAGTTTGCTAATT 7 11584838 0.715576098 3 7 46 1 1 0 0.285714286 0.5 7 0 0 10 3R:11584825-11584860 6 7.5 2578 FBgn0037917 354.31 20.74 31.50666667 0.021167904 0.361620058 0.238044858 5 4 4.5 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 11585088 11585094 + 3R_11585088_11585094_+ 0.658895241 0.658947261 0.658921251 3.68E-05 wkd FBtr0082413|FBtr0082414 11584642|11584642 11585305|11585305 3R + 11585004 11585227 3'utr wkd FlyBase G42038.1 GCGTAACATTTAAAACCGTAGCGTTAGCTTTGAGTTGAGGACCCCGAACATATCGTATGATTATCATGATGATTACCACCCTGAGGCAGCTGACACAAGGACTGGAGGATTATATAGTTTGAAACTTTGACTACTTTATCCGTATTAACTCTGAGACGAGAATGTTGATATTTACCTACGATAATGCGTTACGAACGACTTCTGTTGTGCCCCCGAGCCTGAAA 160 11585085 0.975565849 39 149 925 0.943589744 1.787696568 0.143589744 0.16875 0.317948718 160 9 2 184 3R:11585004-11585227 7 wkd FBtr0082413|FBtr0082414 11584642|11584642 11585305|11585305 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 11585004 11585179 3'utr wkd FlyBase G31719.1 GCGTAACATTTAAAACCGTAGCGTTAGCTTTGAGTTGAGGACCCCGAACATATCGTATGATTATCATGATGATTACCACCCTGAGGCAGCTGACACAAGGACTGGAGGATTATATAGTTTGAAACTTTGACTACTTTATCCGTATTAACTCTGAGACGAGAATGTTGATATTTACC 144 11585085 0.837263679 27 130 815 0.928571429 1.444936571 0.19047619 0.326388889 0.538095238 144 9 6 195 3R:11585004-11585179 7 62 2579 FBgn0037917 354.31 20.74 31.50666667 0.174988005 2.989392478 1.967837495 3 3 3 0.15 dme-miR-995-5p 6mer2-7 ATTCGG 3R 11633775 11633780 - 3R_11633775_11633780_- 0.944644527 0.942396559 0.943520543 0.001589505 Csk FBtr0299728|FBtr0299729|FBtr0300549|FBtr0335449|FBtr0300547|FBtr0300546|FBtr0300548 11633276|11633276|11633276|11633276|11633276|11633276|11633276 11634819|11634819|11634819|11634819|11634819|11634819|11634819 3R - 11633679 11633800 3'utr Csk FlyBase G50193.1 AGTTCGTGGATTTGTTCATTATTCGGTCCATTCTTCTAACAAGGAATCTCCTTCTCTGTACTTTAATCGAACCCATCCAATGCATCTGGCGGCAAGGCAAAGGAAAATTGTAATTTATTTTT 106 11633779 0.890625827 10 105 1057 0.991525424 2.068185862 0.279661017 0.113207547 0.203389831 106 1 0 117 3R:11633679-11633800 6 Csk FBtr0300546|FBtr0300548|FBtr0335449|FBtr0300547|FBtr0299729|FBtr0300549|FBtr0299728 11633276|11633276|11633276|11633276|11633276|11633276|11633276 11634819|11634819|11634819|11634819|11634819|11634819|11634819 ATTCGG 6mer2-7 dme-miR-995-5p 3R - 11633676 11633801 3'utr Csk FlyBase G37962.1 AAGTTCGTGGATTTGTTCATTATTCGGTCCATTCTTCTAACAAGGAATCTCCTTCTCTGTACTTTAATCGAACCCATCCAATGCATCTGGCGGCAAGGCAAAGGAAAATTGTAATTTATTTTTTAA 78 11633779 0.84016015 11 76 760 0.983471074 2.075546961 0.272727273 0.41025641 0.619834711 78 2 0 119 3R:11633676-11633801 6 67 2580 FBgn0262081 3599.453333 94.44666667 145.5866667 0.018613938 0.709395073 0.460206979 -1 -1 -1 0.15 dme-miR-277-3p 6mer3-8 TGCATT 3R 11633900 11633905 - 3R_11633900_11633905_- 0.920053554 0.963280199 0.941666877 0.030565822 Csk FBtr0299728|FBtr0299729|FBtr0300549|FBtr0335449|FBtr0300547|FBtr0300546|FBtr0300548 11633276|11633276|11633276|11633276|11633276|11633276|11633276 11634819|11634819|11634819|11634819|11634819|11634819|11634819 3R - 11633827 11633937 3'utr Csk FlyBase G50194.1 AAACGAAAAAGAGAAAAACACTTGTGAAAATATGCATTACATTAAAACGTCTACATATACATAATACAATACACATTACCTACGTATTTAGCTTATAAATCGATTAATAAT 54 11633916 0.972678928 10 52 316 0.951612903 1.469822016 0.209677419 0.148148148 0.258064516 54 2 1 59 3R:11633827-11633937 6 Csk FBtr0300546|FBtr0300548|FBtr0335449|FBtr0300547|FBtr0299729|FBtr0300549|FBtr0299728 11633276|11633276|11633276|11633276|11633276|11633276|11633276 11634819|11634819|11634819|11634819|11634819|11634819|11634819 TGCATT 6mer3-8 dme-miR-277-3p 3R - 11633888 11633972 3'utr Csk FlyBase G37963.1 GGCGGCTGATAGGCTGCGTGTCCTTAAACTCAAGAAAACGAAAAAGAGAAAAACACTTGTGAAAATATGCATTACATTAAAACGT 36 11633915 0.9183125 8 33 130 0.979166667 1.672097858 0.166666667 0.25 0.4375 36 1 0 47 3R:11633888-11633972 6 14 2581 FBgn0262081 3599.453333 94.44666667 145.5866667 0.00388948 0.148231806 0.096162652 11 10 10.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 11673703 11673709 + 3R_11673703_11673709_+ 0.789435553 0.792693145 0.791064349 0.0023034 CG42327 FBtr0299789|FBtr0299789|FBtr0299789 11673461|11673461|11673461 11673974|11673974|11673974 3R + 11673690 11673720 3'utr CG42327 FlyBase G42072.1 ATTCCTTTATTATTGTGATATAATCGTACAT 9 11673702 0.680148299 2 9 97 1 1.079181246 0 0.222222222 0.416666667 9 0 0 12 3R:11673690-11673720 7 CG42327 FBtr0299789|FBtr0299789|FBtr0299789 11673461|11673461|11673461 11673974|11673974|11673974 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 11673686 11673721 3'utr CG42327 FlyBase G31753.1 ATGTATTCCTTTATTATTGTGATATAATCGTACATT 12 11673702 0.689120412 4 11 137 0.9 1.255272505 0.15 0.5 0.7 12 2 0 18 3R:11673686-11673721 7 10.5 2582 FBgn0259227 1487.13 32.72666667 50.52333333 0.00706058 0.320839275 0.207824767 1 1 1 0.15 dme-miR-184-5p 6mer3-8 TGATAA 3R 11743989 11743994 + 3R_11743989_11743994_+ 0.999983053 0.999999972 0.999991513 1.20E-05 CG14722 FBtr0082431 11743724 11744027 3R + 11743979 11744016 3'utr CG14722 FlyBase G42095.1 GAAATGTTATTGATAATAGAACTGATTTAAAATAAAAT 11 11743990 0.690436529 5 11 85 1 1.113943352 0 0.181818182 0.307692308 11 0 0 13 3R:11743979-11744016 6 CG14722 FBtr0082431 11743724 11744027 TGATAA 6mer3-8 dme-miR-184-5p 3R + 11743934 11744017 3'utr CG14722 FlyBase G31775.1 AATCCCTAATATGTTGGACGAAGATTTTACACAAAGTTTCACAATGAAATGTTATTGATAATAGAACTGATTTAAAATAAAATA 17 11743992 0.984957361 10 16 123 0.958333333 1.361727836 0.166666667 0.352941176 0.541666667 17 1 0 23 3R:11743934-11744017 6 11.5 2583 FBgn0037943 542.9533333 32.08666667 49.30666667 0.021180457 0.358404322 0.233234181 -1 -3 -2 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 11744632 11744638 - 3R_11744632_11744638_- 0.626010484 0.770722812 0.698366648 0.102327049 CG6923 FBtr0330169|FBtr0330169|FBtr0330169|FBtr0082433|FBtr0082433|FBtr0082433|FBtr0082432|FBtr0082432|FBtr0082432|FBtr0307892|FBtr0307892|FBtr0307892 11744481|11744481|11744481|11744481|11744481|11744481|11744227|11744227|11744227|11744481|11744481|11744481 11744911|11744911|11744911|11744938|11744938|11744938|11744938|11744938|11744938|11744938|11744938|11744938 3R - 11744625 11744649 3'utr CG6923 FlyBase G50234.1 AACAAAATTCTTGTGATAAGAATTT 5 11744638 0.628718048 2 4 32 1 0.698970004 0 0 0 5 0 0 5 3R:11744625-11744649 7 CG6923 FBtr0082432|FBtr0082432|FBtr0082432|FBtr0307892|FBtr0307892|FBtr0307892|FBtr0330169|FBtr0330169|FBtr0330169|FBtr0082433|FBtr0082433|FBtr0082433 11744227|11744227|11744227|11744481|11744481|11744481|11744481|11744481|11744481|11744481|11744481|11744481 11744938|11744938|11744938|11744938|11744938|11744938|11744911|11744911|11744911|11744938|11744938|11744938 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 11744626 11744714 3'utr CG6923 FlyBase G37989.1 AAGTATATTAAGTGATTCGGCAAATAATTTCCTATACATATGTACAAATTGTCTACGTTTTGTGAAACAAAATTCTTGTGATAAGAATT 12 11744640 0.989360084 8 9 86 0.8125 1.113943352 0.125 0.333333333 0.5 12 3 0 13 3R:11744626-11744714 7 4 2584 FBgn0037944 206.3266667 5.293333333 8.143333333 0.019386733 0.755667506 0.491199345 0 2 1 0.15 dme-miR-14-3p 7mer-A1 AGACTGA 3R 11744898 11744904 - 3R_11744898_11744904_- 0.822164913 0.822465282 0.822315098 0.000212415 CG6923 FBtr0330169|FBtr0082433|FBtr0082432|FBtr0307892 11744481|11744481|11744227|11744481 11744911|11744938|11744938|11744938 3R - 11744883 11744936 stop_codon CG6923 FlyBase G50237.1 TTGTGTGCACGGCATCTTTATGTAAATCCCTCAGACTGAGTTTGTTCTCGGCAT 49 11744906 0.982589196 7 42 319 0.842105263 0.903089987 0.087719298 0.12244898 0.245614035 49 4 5 48 3R:11744883-11744936 7 CG6923 FBtr0082432|FBtr0307892|FBtr0330169|FBtr0082433 11744227|11744481|11744481|11744481 11744938|11744938|11744911|11744938 AGACTGA 7mer-A1 dme-miR-14-3p 3R - 11744883 11744917 stop_codon CG6923 FlyBase G37990.1 ATGTAAATCCCTCAGACTGAGTTTGTTCTCGGCAT 24 11744906 0.868775497 3 24 139 1 1.491361694 0.032258065 0.25 0.419354839 24 0 0 31 3R:11744883-11744917 7 35.5 2585 FBgn0037944 206.3266667 5.293333333 8.143333333 0.172057255 6.706549118 4.359394187 2 2 2 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 11751836 11751842 - 3R_11751836_11751842_- 0.690967859 0.647412604 0.669190232 0.030798248 Lk6 FBtr0082534|FBtr0082534|FBtr0082534 11750929|11750929|11750929 11752971|11752971|11752971 3R - 11751712 11751867 3'utr Lk6 FlyBase G50256.1 CATACACCTATAATATTTAAAAAATTGTGATATAAAATGTAAATGTAAATGCACCTGAAGAAATCTATCTATCAAATGACGCTGTGCCATCAACAACCACTTCAATCTACTGATAAGAGGAGTATCATTTTCCACAGACCTTATTTGTTTACGTCC 80 11751843 0.981087449 18 76 625 0.955555556 1.457377197 0.022222222 0.1125 0.211111111 80 2 2 86 3R:11751712-11751867 7 Lk6 FBtr0082534|FBtr0082534|FBtr0082534 11750929|11750929|11750929 11752971|11752971|11752971 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 11751745 11751861 3'utr Lk6 FlyBase G37998.1 CCTATAATATTTAAAAAATTGTGATATAAAATGTAAATGTAAATGCACCTGAAGAAATCTATCTATCAAATGACGCTGTGCCATCAACAACCACTTCAATCTACTGATAAGAGGAGT 68 11751843 0.985836117 13 63 524 0.926315789 1.467361417 0 0.308823529 0.505263158 68 5 2 88 3R:11751745-11751861 7 55 2586 FBgn0017581 12415.55667 253.5666667 388.6133333 0.004429926 0.216905482 0.141528855 1 1 1 0.15 dme-miR-965-3p 6mer3-8 TACGCT 3R 11752657 11752662 - 3R_11752657_11752662_- 0.872818109 0.999863642 0.936340876 0.089834735 Lk6 FBtr0082535|FBtr0082534 11752383|11750929 11752971|11752971 3R - 11752583 11752749 5'utr Lk6 FlyBase G50261.2 AATAAAATGATGAATACTTGTGGTAGGAGAAAGCGACTGCGAAGTGAAACCAACTGAAACCGAGGGAAATTGAGAGTGGCAATAGTCTACGCTGTTTTGAAGCAAGCCAAACAGTCGTTCGAGATGAAAACAACAGAAAACAAATACCTTTTTTTATAAAAAAGATT 143 11752679 0.933857177 24 135 603 0.95625 2.184691431 0.20625 0.097902098 0.19375 143 7 0 153 3R:11752583-11752749 6 Lk6 FBtr0082535|FBtr0082534 11752383|11750929 11752971|11752971 TACGCT 6mer3-8 dme-miR-965-3p 3R - 11752593 11752749 5'utr Lk6 FlyBase G38001.1 AATAAAATGATGAATACTTGTGGTAGGAGAAAGCGACTGCGAAGTGAAACCAACTGAAACCGAGGGAAATTGAGAGTGGCAATAGTCTACGCTGTTTTGAAGCAAGCCAAACAGTCGTTCGAGATGAAAACAACAGAAAACAAATACCTTTTTTTAT 79 11752679 0.957815727 20 74 345 0.95 1.755874856 0.283333333 0.417721519 0.616666667 79 5 1 114 3R:11752593-11752749 6 23 2587 FBgn0017581 12415.55667 253.5666667 388.6133333 0.001852515 0.090705929 0.059184794 17 17 17 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 11781589 11781595 - 3R_11781589_11781595_- 0.694207691 0.610708226 0.652457959 0.059043063 CG17360 FBtr0082531|FBtr0082531|FBtr0082531|FBtr0333819|FBtr0333819|FBtr0333819 11781129|11781129|11781129|11781129|11781129|11781129 11781819|11781819|11781819|11781819|11781819|11781819 3R - 11781519 11781658 3'utr CG17360 FlyBase G50296.1 TGCGTGCCTCCGCTTGACTCATTCATTCGTTTGCGCTTAGTAACATCTCATTTGAATAATTTTTGTGATATTAAACTTAAAGTCGCTGATCTTTGGTATGCTCTTTTGTAGGATATTTAGTTTCTATTGATTTTCTACAT 167 11781597 0.910691985 30 153 1641 0.909090909 1.67669361 0.224880383 0.221556886 0.377990431 167 16 3 190 3R:11781519-11781658 7 CG17360 FBtr0333819|FBtr0333819|FBtr0333819|FBtr0082531|FBtr0082531|FBtr0082531 11781129|11781129|11781129|11781129|11781129|11781129 11781819|11781819|11781819|11781819|11781819|11781819 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 11781530 11781663 3'utr CG17360 FlyBase G38028.1 TGTAATGCGTGCCTCCGCTTGACTCATTCATTCGTTTGCGCTTAGTAACATCTCATTTGAATAATTTTTGTGATATTAAACTTAAAGTCGCTGATCTTTGGTATGCTCTTTTGTAGGATATTTAGTTTCTATTG 100 11781597 0.746402167 24 91 974 0.919708029 2.100370545 0.116788321 0.29 0.481751825 100 11 0 126 3R:11781530-11781663 7 57.5 2588 FBgn0037949 382.3133333 8.926666667 13.76333333 0.150400195 6.44137416 4.177767014 2 2 2 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 3R 11789463 11789470 - 3R_11789463_11789470_- 0.643201147 0.643543692 0.643372419 0.000242255 Sbf FBtr0082529|FBtr0082530 11789291|11789291 11789928|11789928 3R - 11789369 11789492 3'utr Sbf FlyBase G50302.1 TATATAGGTTTATAGTGAATTTACCAAAGAATATTCCACCTTTGTTGCGCAATTGAAATGCATTTCTTGATTGCTTCCTTTAAACTAAACCCTATTATTAAACGCTTTCCTTTATTTATACACT 131 11789441 0.874316674 18 123 1075 0.953333333 1.854306042 0.326666667 0.106870229 0.22 131 6 1 143 3R:11789369-11789492 8 Sbf FBtr0082529|FBtr0082530 11789291|11789291 11789928|11789928 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 11789403 11789493 3'utr Sbf FlyBase G38031.1 CTATATAGGTTTATAGTGAATTTACCAAAGAATATTCCACCTTTGTTGCGCAATTGAAATGCATTTCTTGATTGCTTCCTTTAAACTAAAC 64 11789471 0.852379275 16 64 514 1 1.934498451 0.197674419 0.234375 0.430232558 64 0 0 86 3R:11789403-11789493 8 49.5 2589 FBgn0025802 636.01 11.3 17.24 0.077828965 4.380530973 2.871229698 -29 1 -14 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3R 11789607 11789613 - 3R_11789607_11789613_- 0.439128963 0.289757325 0.364443144 0.105621742 Sbf FBtr0082529|FBtr0082530 11789291|11789291 11789928|11789928 3R - 11789545 11789635 3'utr Sbf FlyBase G50303.1 ATGTAAAGAAACTATAAAATTATGTGATTATATAAACAAACAAAAATCAGACTATGATAAATTTACGATAAAATGGAAAAGCCACGCCCGC 27 11789616 0.976840609 9 26 167 0.966666667 1.462397998 0.033333333 0.111111111 0.2 27 1 0 29 3R:11789545-11789635 7 Sbf FBtr0082529|FBtr0082530 11789291|11789291 11789928|11789928 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 11789562 11789624 3'utr Sbf FlyBase G38032.1 CTATAAAATTATGTGATTATATAAACAAACAAAAATCAGACTATGATAAATTTACGATAAAAT 14 11789589 0.979362188 7 12 83 0.913043478 1.322219295 0 0.5 0.695652174 14 2 0 21 3R:11789562-11789624 7 11 2590 FBgn0025802 636.01 11.3 17.24 0.017295326 0.973451327 0.638051044 3 -24 -10.5 0.15 dme-miR-184-3p 6mer3-8 TCCGTC 3R 11964883 11964888 - 3R_11964883_11964888_- 0.848732101 0.874716383 0.861724242 0.018373675 CG12213 FBtr0334155|FBtr0113223|FBtr0334156 11964672|11964672|11964672 11965424|11965424|11965424 3R - 11964818 11964912 3'utr CG12213 FlyBase G50393.1 ACGTTTCACTTCTGCATTTGCAATTCCGTCAACCCATTTCGCTAGAGATTAGGTAGCTACATAAGATAGGAGTGTACGCTAGCATTCGAAAACAC 158 11964889 0.803984064 14 154 1113 0.969230769 2.276461804 0.087179487 0.164556962 0.323076923 158 6 0 189 3R:11964818-11964912 6 CG12213 FBtr0334156|FBtr0113223|FBtr0334155 11964672|11964672|11964672 11965424|11965424|11965424 TCCGTC 6mer3-8 dme-miR-184-3p 3R - 11964867 11964911 3'utr CG12213 FlyBase G38087.1 CGTTTCACTTCTGCATTTGCAATTCCGTCAACCCATTTCGCTAGA 83 11964889 0.806439199 2 79 560 0.955752212 1.73239376 0.159292035 0.289156627 0.477876106 83 4 1 108 3R:11964867-11964911 6 113 2591 FBgn0260742 1391.876667 80.28333333 122.6666667 0.081185354 1.407515051 0.921195652 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 11964971 11964978 - 3R_11964971_11964978_- 0.650105618 0.650096733 0.650101175 6.29E-06 CG12213 FBtr0334155|FBtr0334155|FBtr0334155|FBtr0113223|FBtr0113223|FBtr0113223|FBtr0334156|FBtr0334156|FBtr0334156 11964672|11964672|11964672|11964672|11964672|11964672|11964672|11964672|11964672 11965424|11965424|11965424|11965424|11965424|11965424|11965424|11965424|11965424 3R - 11964929 11965003 3'utr CG12213 FlyBase G50394.1 AAATATACTCTATATACTTGGTTTTCTGTGATAAAAATAAACGCTGCGCTGCATTTGGGCAATGTTGCCTGTTTT 304 11964980 0.709617965 17 279 2986 0.915068493 1.62065648 0.046575342 0.151315789 0.293150685 304 24 7 334 3R:11964929-11965003 8 CG12213 FBtr0334156|FBtr0334156|FBtr0334156|FBtr0113223|FBtr0113223|FBtr0113223|FBtr0334155|FBtr0334155|FBtr0334155 11964672|11964672|11964672|11964672|11964672|11964672|11964672|11964672|11964672 11965424|11965424|11965424|11965424|11965424|11965424|11965424|11965424|11965424 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 11964943 11965031 3'utr CG12213 FlyBase G38088.1 TTGCTAAATCCTTACAAGTTTCATTAACAAATATACTCTATATACTTGGTTTTCTGTGATAAAAATAAACGCTGCGCTGCATTTGGGCA 178 11964980 0.692796783 15 163 1662 0.931174089 2.06069784 0.052631579 0.275280899 0.477732794 178 16 1 230 3R:11964943-11965031 8 230.5 2592 FBgn0260742 1391.876667 80.28333333 122.6666667 0.165603753 2.871081586 1.879076087 2 2 2 0.15 dme-miR-14-3p 7mer-m8 AAGACTG 3R 11965085 11965091 - 3R_11965085_11965091_- 0.669081961 0.670598012 0.669839986 0.001071974 CG12213 FBtr0334155|FBtr0113223|FBtr0334156 11964672|11964672|11964672 11965424|11965424|11965424 3R - 11965012 11965152 3'utr CG12213 FlyBase G50395.1 CTCGCAGGAAATACAATACTCTGAGATGGAGCTACGAACAAATGCAGACAGATTTAAAATGAAGACTGTTTCAGTTCTGCCTTGCAAATTATTAGTCCCGAATTAGCAGTAATCGAAATCGTTGCTAAATCCTTACAAGTT 33 11965094 0.974567835 18 32 197 0.977272727 1.633468456 0.113636364 0.272727273 0.454545455 33 1 0 43 3R:11965012-11965152 7 CG12213 FBtr0334156|FBtr0113223|FBtr0334155 11964672|11964672|11964672 11965424|11965424|11965424 AAGACTG 7mer-m8 dme-miR-14-3p 3R - 11965066 11965207 3'utr CG12213 FlyBase G38089.1 AACGTCATGACTACCATCATTTCGTTAATAGCAAATGAAGAACAAGAAATTAAAACTCGCAGGAAATACAATACTCTGAGATGGAGCTACGAACAAATGCAGACAGATTTAAAATGAAGACTGTTTCAGTTCTGCCTTGCAA 23 11965084 0.976204513 13 22 143 0.96875 1.491361694 0.15625 0.347826087 0.53125 23 1 0 31 3R:11965066-11965207 7 11 2593 FBgn0260742 1391.876667 80.28333333 122.6666667 0.007902999 0.137014739 0.089673913 3 -7 -2 0.15 dme-miR-304-5p 6mer3-8 TGAGAT 3R 11965126 11965131 - 3R_11965126_11965131_- 0.998335262 0.991863414 0.995099338 0.004576324 CG12213 FBtr0334155|FBtr0113223|FBtr0334156 11964672|11964672|11964672 11965424|11965424|11965424 3R - 11965012 11965152 3'utr CG12213 FlyBase G50395.1 CTCGCAGGAAATACAATACTCTGAGATGGAGCTACGAACAAATGCAGACAGATTTAAAATGAAGACTGTTTCAGTTCTGCCTTGCAAATTATTAGTCCCGAATTAGCAGTAATCGAAATCGTTGCTAAATCCTTACAAGTT 33 11965131 0.974567835 18 32 197 0.977272727 1.633468456 0.113636364 0.272727273 0.454545455 33 1 0 43 3R:11965012-11965152 6 CG12213 FBtr0334156|FBtr0113223|FBtr0334155 11964672|11964672|11964672 11965424|11965424|11965424 TGAGAT 6mer3-8 dme-miR-304-5p 3R - 11965066 11965207 3'utr CG12213 FlyBase G38089.1 AACGTCATGACTACCATCATTTCGTTAATAGCAAATGAAGAACAAGAAATTAAAACTCGCAGGAAATACAATACTCTGAGATGGAGCTACGAACAAATGCAGACAGATTTAAAATGAAGACTGTTTCAGTTCTGCCTTGCAA 23 11965128 0.976204513 13 22 143 0.96875 1.491361694 0.15625 0.347826087 0.53125 23 1 0 31 3R:11965066-11965207 6 8.5 2594 FBgn0260742 1391.876667 80.28333333 122.6666667 0.006106863 0.105875026 0.069293478 0 -3 -1.5 0.15 dme-miR-305-5p 7mer-m1 GTACAAT 3R 12014686 12014692 + 3R_12014686_12014692_+ 0.765586638 0.765540069 0.765563353 3.29E-05 GCC185 FBtr0113224 12014585 12015059 3R + 12014675 12014695 3'utr GCC185 FlyBase G42163.1 CTGTAAATCTTGTACAATTTC 5 12014685 0.607191249 4 5 40 1 0.903089987 0 0.6 0.75 5 0 0 8 3R:12014675-12014695 7 GCC185 FBtr0113224 12014585 12015059 GTACAAT 7mer-m1 dme-miR-305-5p 3R + 12014674 12014696 3'utr GCC185 FlyBase G31820.1 TCTGTAAATCTTGTACAATTTCC 6 12014684 0.670810293 3 5 48 0.875 0.84509804 0 0.333333333 0.5 6 1 0 7 3R:12014674-12014696 7 5.5 2595 FBgn0037979 856.9066667 25.72 39.52333333 0.006418435 0.213841369 0.139158303 1 2 1.5 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 12015178 12015183 - 3R_12015178_12015183_- 0.982156151 0.985204667 0.983680409 0.002155615 CG3313 FBtr0335433|FBtr0082555 12014941|12014941 12015246|12015246 3R - 12015162 12015199 3'utr CG3313 FlyBase G50438.1 GTAGTTATTCGACTTGTGATCTTTAATCTTTTGGCGCA 33 12015184 0.643515628 5 31 345 0.952380952 1.124938737 0.214285714 0.212121212 0.380952381 33 0 2 40 3R:12015162-12015199 6 CG3313 FBtr0335433|FBtr0082555 12014941|12014941 12015246|12015246 TGATCT 6mer3-8 dme-bantam-3p 3R - 12015163 12015197 3'utr CG3313 FlyBase G38113.1 AGTTATTCGACTTGTGATCTTTAATCTTTTGGCGC 20 12015179 0.615368066 6 18 186 0.961538462 1.397940009 0 0.315789474 0.5 19 1 0 25 3R:12015163-12015197 6 26 2596 FBgn0037980 81.43333333 5.28 7.943333333 0.319279574 4.924242424 3.273185061 1 -4 -1.5 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 12068947 12068954 - 3R_12068947_12068954_- 0.49295468 0.492022383 0.492488531 0.000659236 ATP8B FBtr0339645|FBtr0339646|FBtr0300351|FBtr0307016|FBtr0307015|FBtr0339644|FBtr0339643 12068373|12068373|12068373|12068373|12068373|12068373|12068373 12069582|12069582|12069582|12069582|12069582|12069582|12069582 3R - 12068806 12069119 3'utr ATP8B FlyBase G50444.1 ATACCCAAACTCCTCAAAAAAGCACAAAAATCCCTTCTCGCGTATTTATATCATCGTTGACTGCATTTAAGAGAGTGAGCCCCCTGAATGATTGATTGTGTGGTTGGTTTTGAGGACTTAGAATAGGTTATATTAAGTTTATACTGTCTTTGGGAAACTGAAAGTGTACTTAATTGCTTAAATATGTGCTGTGTGCTTAGCCAATATAACTGCGGTGCTTGCCACCGATCAGAGTAGCTTATCTACAAATAGCTGAACGAACTCTCGTCTCAAAGTCCAATGCTATATGCTATATACCATATACTACCCCCAAC 933 12068955 0.986438504 62 912 7764 0.976525822 2.238882089 0.36713615 0.120042872 0.229107981 933 20 5 1040 3R:12068806-12069119 8 ATP8B FBtr0339643|FBtr0339644|FBtr0307015|FBtr0307016|FBtr0300351|FBtr0339646|FBtr0339645 12068373|12068373|12068373|12068373|12068373|12068373|12068373 12069582|12069582|12069582|12069582|12069582|12069582|12069582 GTACTTAA 8mer-A1 dme-miR-252-5p 3R - 12068886 12069078 3'utr ATP8B FlyBase G38118.1 GTATTTATATCATCGTTGACTGCATTTAAGAGAGTGAGCCCCCTGAATGATTGATTGTGTGGTTGGTTTTGAGGACTTAGAATAGGTTATATTAAGTTTATACTGTCTTTGGGAAACTGAAAGTGTACTTAATTGCTTAAATATGTGCTGTGTGCTTAGCCAATATAACTGCGGTGCTTGCCACCGATCAGAG 720 12068955 0.895378629 40 693 5933 0.964545455 2.071472874 0.398181818 0.375521558 0.591818182 719 31 8 1061 3R:12068886-12069078 8 486 2597 FBgn0037989 9025.686667 173.8733333 265.4733333 0.053846319 2.795138223 1.830692348 1 1 1 0.15 "dme-miR-995-3p,dme-miR-998-3p" 6mer2-7 GGTGCT 3R 12069565 12069570 - 3R_12069565_12069570_- 0.997450678 0.999864215 0.998657446 0.001706602 ATP8B FBtr0339645|FBtr0339646|FBtr0300351|FBtr0307016|FBtr0307015|FBtr0339644|FBtr0339643 12068373|12068373|12068373|12068373|12068373|12068373|12068373 12069582|12069582|12069582|12069582|12069582|12069582|12069582 3R - 12069497 12069722 stop_codon ATP8B FlyBase G50447.1 AGAACCAAAACCACTCGTCGATGGCAGACATAACGGCCGATGGGCGGGGCAATGGGGGAGATGATGGCAGAGGAAGTGGAGGCTCAGATGATATGAGTCCTCGTGCTCCCTGCCAGGACCTGGATACGATTAATCTCTAAGCTTTAGATGCAGGTGCTGGATCGGTAGCGGGTTTAGTAACAAACACCAAAAACTATAGGGAATTTAAGTTAGCGAACACTAAGAT 203 12069593 0.977334803 31 166 1161 0.82278481 1.68797462 0.23628692 0.142857143 0.265822785 203 39 3 195 3R:12069497-12069722 6 ATP8B FBtr0339643|FBtr0339644|FBtr0307015|FBtr0307016|FBtr0300351|FBtr0339646|FBtr0339645 12068373|12068373|12068373|12068373|12068373|12068373|12068373 12069582|12069582|12069582|12069582|12069582|12069582|12069582 GGTGCT 6mer2-7 "dme-miR-995-3p,dme-miR-998-3p" 3R - 12069480 12069694 stop_codon ATP8B FlyBase G38122.1 CATAACGGCCGATGGGCGGGGCAATGGGGGAGATGATGGCAGAGGAAGTGGAGGCTCAGATGATATGAGTCCTCGTGCTCCCTGCCAGGACCTGGATACGATTAATCTCTAAGCTTTAGATGCAGGTGCTGGATCGGTAGCGGGTTTAGTAACAAACACCAAAAACTATAGGGAATTTAAGTTAGCGAACACTAAGATAAGGATTTAAGTTTTAT 140 12069593 0.978811119 36 118 804 0.848780488 1.939519253 0.258536585 0.378571429 0.575609756 140 30 1 174 3R:12069480-12069694 6 75.5 2598 FBgn0037989 9025.686667 173.8733333 265.4733333 0.008365015 0.434224148 0.28439768 23 23 23 0.15 dme-miR-965-3p 7mer-A1 ACGCTTA 3R 12411560 12411566 + 3R_12411560_12411566_+ 0.823349558 0.822851878 0.823100718 0.000351927 CG5196 FBtr0082585|FBtr0082584 12411468|12411468 12411768|12411768 3R + 12411491 12411594 3'utr CG5196 FlyBase G42196.1 TCGATGGCATTCTGTGCCACATTCGGCTTGTATATAGAATTAGATTCCGCTTGGAGACTCGACTGTTTAACGCTTAGCCAGGCCGTCATCCCGTTTACTCTGTT 63 12411557 0.666139571 14 57 417 0.930555556 1.826074803 0.180555556 0.111111111 0.222222222 63 5 0 67 3R:12411491-12411594 7 CG5196 FBtr0082585|FBtr0082584 12411468|12411468 12411768|12411768 ACGCTTA 7mer-A1 dme-miR-965-3p 3R + 12411512 12411562 3'utr CG5196 FlyBase G31842.1 TTCGGCTTGTATATAGAATTAGATTCCGCTTGGAGACTCGACTGTTTAACG 42 12411556 0.968215978 7 39 266 0.956521739 1.819543936 0.072463768 0.523809524 0.710144928 42 3 0 66 3R:12411512-12411562 3 20.5 2599 FBgn0038039 509 36.03 54.94 0.040275049 0.568970303 0.373134328 3 4 3.5 0.15 dme-miR-33-5p 8mer-A1 CAATGCAA 3R 12421149 12421156 + 3R_12421149_12421156_+ 0.632249583 0.624043284 0.628146433 0.00580273 pps FBtr0304744|FBtr0082586 12420906|12420906 12421251|12421251 3R + 12421110 12421214 3'utr pps FlyBase G42215.1 AACCCGCCCCGAGCTCCAAATGGATCATCCTTCGCATTGCAATGCAAATTTAGATTCGGTTTTTACATTACGCTCTAACAAATCGTGTACATTTCCTCCGAAAAT 41 12421146 0.985695043 12 40 335 1 1.672097858 0.042553191 0.146341463 0.255319149 41 0 0 47 3R:12421110-12421214 8 pps FBtr0304744|FBtr0082586 12420906|12420906 12421251|12421251 CAATGCAA 8mer-A1 dme-miR-33-5p 3R + 12421124 12421190 3'utr pps FlyBase G31855.1 TCCAAATGGATCATCCTTCGCATTGCAATGCAAATTTAGATTCGGTTTTTACATTACGCTCTAACAA 25 12421145 0.776797677 10 24 214 0.911764706 1.491361694 0.176470588 0.28 0.470588235 25 3 0 31 3R:12421124-12421190 8 19.5 2600 FBgn0082831 827.4033333 14.92333333 22.97333333 0.023567708 1.306678579 0.848810215 3 4 3.5 0.15 dme-miR-79-3p 6mer2-7 AGCTTT 3R 12458370 12458375 + 3R_12458370_12458375_+ 0.961184878 0.999999999 0.980592439 0.02744642 trus FBtr0082634 12458206 12458444 3R + 12458309 12458386 3'utr trus FlyBase G42260.1 AAAGCTAAGCTTCTCGATTGTCCTAGGAAGATTTTATGCTCTAGTTGTTAAGAACGTTGTAAGCTTTTAGACACTCCA 10 12458367 0.987154186 8 9 81 1 1 0.1 0 0 10 0 0 10 3R:12458309-12458386 6 trus FBtr0082634 12458206 12458444 AGCTTT 6mer2-7 dme-miR-79-3p 3R + 12458358 12458386 3'utr trus FlyBase G31901.1 AAGAACGTTGTAAGCTTTTAGACACTCCA 6 12458376 0.858390259 4 6 35 1 0.77815125 0 0 0 6 0 0 6 3R:12458358-12458386 6 4.5 2601 FBgn0038055 142.6666667 10.03 15.44333333 0.031542056 0.448654038 0.29138787 3 -6 -1.5 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 12511283 12511288 + 3R_12511283_12511288_+ 0.998556886 0.999749974 0.99915343 0.000843649 Hsp70Bc FBtr0082638 12511242 12511461 3R + 12511258 12511363 3'utr Hsp70Bc FlyBase G42295.1 TTATTTCGGCTTAAGTTTTTAAAAGTGATCTTAATAGTTGAGTGCCATAAAAAAATGTACATATCTTCAACTATAGTATTATACTCATATGTTAGCAACCCATTGT 190 12511283 0.842225106 22 173 1799 0.915178571 2.311753861 0.375 0.136842105 0.267857143 190 19 0 205 3R:12511258-12511363 6 Hsp70Bc FBtr0082638 12511242 12511461 TGATCT 6mer3-8 dme-bantam-3p 3R + 12511262 12511417 3'utr Hsp70Bc FlyBase G31924.1 TTCGGCTTAAGTTTTTAAAAGTGATCTTAATAGTTGAGTGCCATAAAAAAATGTACATATCTTCAACTATAGTATTATACTCATATGTTAGCAACCCATTGTTTTAACTACAAATAATAGCAAAAATAATAATAAATGCAATACTCTTAAGCATTA 115 12511283 0.851973 25 102 1017 0.886904762 1.696065014 0.291666667 0.339130435 0.547619048 115 17 2 149 3R:12511262-12511417 6 115 2602 FBgn0013279 309.6566667 15.58666667 23.73666667 0.371379054 7.378100941 4.844825165 0 0 0 0.15 dme-miR-184-3p 6mer2-7 CCGTCC 3R 12624178 12624183 - 3R_12624178_12624183_- 0.905048613 0.845967722 0.875508167 0.041776505 Vha55 FBtr0082671|FBtr0082670 12623760|12623760 12624766|12624766 3R - 12624030 12624214 3'utr Vha55 FlyBase G50617.1 AATCCCCGCCCCCTGTTTTCCGTACTGCCCCCCGTCCCTGCACCGAAACCTTGTGAACAATTTGTACAGCAACTCAACTAAACAATGGAATATTAAGTGCAAAAAACAATGCTTTAATGCAAATAATGTTTTAAATGCGGAAATCTGCAAAAAGTATAAAAATCTATAAAAAAAAATACTGTTTG 54 12624176 0.943883788 12 53 226 0.983606557 1.77815125 0.180327869 0.12962963 0.229508197 54 1 0 60 3R:12624030-12624214 6 Vha55 FBtr0082670|FBtr0082671 12623760|12623760 12624766|12624766 CCGTCC 6mer2-7 dme-miR-184-3p 3R - 12624091 12624207 3'utr Vha55 FlyBase G38258.1 GCCCCCTGTTTTCCGTACTGCCCCCCGTCCCTGCACCGAAACCTTGTGAACAATTTGTACAGCAACTCAACTAAACAATGGAATATTAAGTGCAAAAAACAATGCTTTAATGCAAAT 38 12624176 0.949966502 14 36 160 1 1.819543936 0.106060606 0.447368421 0.681818182 38 0 0 66 3R:12624091-12624207 6 31 2603 FBgn0005671 1164.673333 56.6 86.52333333 0.026616905 0.54770318 0.358284856 -7 -7 -7 0.15 dme-miR-33-5p 8mer-A1 CAATGCAA 3R 12629492 12629499 + 3R_12629492_12629499_+ 0.62564083 0.615180392 0.620410611 0.00739662 Snx3 FBtr0082642|FBtr0082641 12629451|12629451 12630495|12630061 3R + 12629305 12629529 stop_codon Snx3 FlyBase G42297.1 CATCGAGGAGCGGCGCAAGGGACTGGAGGCCTTCATCAACAAGATAGCCGGACATCCGCTGGCGCAGAACGAGCGCTGCCTGCATATGTTCCTGCAGGAGAATGTCATAGATAAGAACTACGTGCCCGGCAAGATTCGGAACACATAAGCAGCTTAGTCCGGCGCAATCGAAACCCCCTAACCATAGCAATGCAATGAAGCAAAAACTCGAACGAACAAACCTGC 50 12629489 0.919818627 17 48 163 0.980769231 1.40654018 0.326923077 0.04 0.076923077 50 0 1 51 3R:12629305-12629529 8 Snx3 FBtr0082642|FBtr0082641 12629451|12629451 12630495|12630061 CAATGCAA 8mer-A1 dme-miR-33-5p 3R + 12629376 12629667 stop_codon Snx3 FlyBase G31927.1 AGCGCTGCCTGCATATGTTCCTGCAGGAGAATGTCATAGATAAGAACTACGTGCCCGGCAAGATTCGGAACACATAAGCAGCTTAGTCCGGCGCAATCGAAACCCCCTAACCATAGCAATGCAATGAAGCAAAAACTCGAACGAACAAACCTGCTACGAAATCTTTATGGGAAGCCGTGTGAATGTGTGTGCTTGCCCGGATTGGAGGAGGATGGAGCAGATGAGCGATGATGTAGGTTGGTGGAGAAGGGATCTGTTATGCGACGCGATACGAGGCGGGAAGTGCTGCTGC 49 12629500 0.949701721 27 46 196 0.974025974 1.875061263 0.324675325 0.448979592 0.649350649 49 2 0 75 3R:12629376-12629667 8 11 2604 FBgn0038065 1577.186667 135.3066667 207.25 0.006974444 0.081296807 0.053075995 3 -8 -2.5 0.15 dme-miR-31a-5p 6mer2-7 CTTGCC 3R 12629567 12629572 + 3R_12629567_12629572_+ 0.999559625 0.567394782 0.783477204 0.305586661 Snx3 FBtr0082642|FBtr0082641 12629451|12629451 12630495|12630061 3R + 12629543 12629640 3'utr Snx3 FlyBase G42298.1 TGGGAAGCCGTGTGAATGTGTGTGCTTGCCCGGATTGGAGGAGGATGGAGCAGATGAGCGATGATGTAGGTTGGTGGAGAAGGGATCTGTTATGCGAC 38 12629568 0.95821318 15 33 209 0.891304348 1.311753861 0.47826087 0.131578947 0.282608696 38 4 1 41 3R:12629543-12629640 6 Snx3 FBtr0082642|FBtr0082641 12629451|12629451 12630495|12630061 CTTGCC 6mer2-7 dme-miR-31a-5p 3R + 12629376 12629667 stop_codon Snx3 FlyBase G31927.1 AGCGCTGCCTGCATATGTTCCTGCAGGAGAATGTCATAGATAAGAACTACGTGCCCGGCAAGATTCGGAACACATAAGCAGCTTAGTCCGGCGCAATCGAAACCCCCTAACCATAGCAATGCAATGAAGCAAAAACTCGAACGAACAAACCTGCTACGAAATCTTTATGGGAAGCCGTGTGAATGTGTGTGCTTGCCCGGATTGGAGGAGGATGGAGCAGATGAGCGATGATGTAGGTTGGTGGAGAAGGGATCTGTTATGCGACGCGATACGAGGCGGGAAGTGCTGCTGC 49 12629577 0.949701721 27 46 196 0.974025974 1.875061263 0.324675325 0.448979592 0.649350649 49 2 0 75 3R:12629376-12629667 6 12.5 2605 FBgn0038065 1577.186667 135.3066667 207.25 0.007925504 0.092382736 0.060313631 -1 -10 -5.5 0.15 dme-miR-980-3p 6mer2-7 GCAGCT 3R 12704567 12704572 + 3R_12704567_12704572_+ 0.993156943 0.995041777 0.99409936 0.001332826 Past1 FBtr0082655 12704080 12704875 3R + 12704398 12704631 3'utr Past1 FlyBase G42337.1 AAAGCAGGATGTAGAGTAGCAGCCTAGTGGAATAAGACAAGGAGTGTGTGTTAAGCGCCTAATTGTCATTGTTGACTTAAGGAAAGTGAAGTGTGGATAAACAATTGTTCAATGCCAATGAAAAAAGCATGAGTTAAACTGTATACAATATCTAGGTTAATGTCGATGTGCAGCTTGAAGGGCCATTAATTTGCAATCGTACCACTTTTGATACACAATAAATGTATTTTTGTT 473 12704564 0.976979186 34 459 3347 0.971751412 2.411619706 0.199623352 0.109936575 0.207156309 473 14 1 516 3R:12704398-12704631 6 Past1 FBtr0082655 12704080 12704875 GCAGCT 6mer2-7 dme-miR-980-3p 3R + 12704388 12704616 3'utr Past1 FlyBase G31961.1 AATCGATTGTAAAGCAGGATGTAGAGTAGCAGCCTAGTGGAATAAGACAAGGAGTGTGTGTTAAGCGCCTAATTGTCATTGTTGACTTAAGGAAAGTGAAGTGTGGATAAACAATTGTTCAATGCCAATGAAAAAAGCATGAGTTAAACTGTATACAATATCTAGGTTAATGTCGATGTGCAGCTTGAAGGGCCATTAATTTGCAATCGTACCACTTTTGATACACAAT 317 12704564 0.978762787 25 307 2085 0.965092402 1.973127854 0.170431211 0.372239748 0.59137577 317 13 4 470 3R:12704388-12704616 6 319 2606 FBgn0016693 1355.16 61.20333333 93.61666667 0.235396558 5.212134415 3.407512907 3 3 3 0.15 dme-miR-34-5p 6mer2-7 ACTGCC 3R 12704760 12704765 + 3R_12704760_12704765_+ 0.997229709 0.999976377 0.998603043 0.00194221 Past1 FBtr0082655 12704080 12704875 3R + 12704742 12704809 3'utr Past1 FlyBase G42339.1 AAGAGAAACGTGCAATTTACTGCCTGTGCTTCGACTATTTTGTAATTAGTGAATTCTTGAATATTAAA 14 12704777 0.901953916 10 14 127 1 1.380211242 0.083333333 0.357142857 0.625 14 0 0 24 3R:12704742-12704809 6 Past1 FBtr0082655 12704080 12704875 ACTGCC 6mer2-7 dme-miR-34-5p 3R + 12704747 12704777 3'utr Past1 FlyBase G31962.1 AAACGTGCAATTTACTGCCTGTGCTTCGACT 8 12704759 0.611920348 6 8 59 1 1.041392685 0.181818182 0.375 0.545454545 8 0 0 11 3R:12704747-12704777 6 9 2607 FBgn0016693 1355.16 61.20333333 93.61666667 0.006641282 0.147050814 0.096136728 -17 1 -8 0.15 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 12705588 12705595 - 3R_12705588_12705595_- 0.631128799 0.631035405 0.631082102 6.60E-05 mus308 FBtr0082662 12705521 12705670 3R - 12705527 12705658 3'utr mus308 FlyBase G50655.1 TTTTATAGATTTGTAATCAATTTGTTTAAAGACTGAATGTTTTAGGACTGCTTGGCCTGCCACTCCGTCCATGATCCGGCATAAGCCTTGGCGCTGCAATTGATTAATAAATAATTGTACATATCTTTTAAA 210 12705595 0.982086269 23 192 1423 0.905882353 1.886490725 0.101960784 0.19047619 0.333333333 210 22 2 231 3R:12705527-12705658 8 mus308 FBtr0082662 12705521 12705670 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R - 12705560 12705653 3'utr mus308 FlyBase G38284.1 TAGATTTGTAATCAATTTGTTTAAAGACTGAATGTTTTAGGACTGCTTGGCCTGCCACTCCGTCCATGATCCGGCATAAGCCTTGGCGCTGCAA 136 12705595 0.732745538 20 126 897 0.923423423 2.010723865 0.207207207 0.463235294 0.671171171 136 16 1 205 3R:12705560-12705653 8 104 2608 FBgn0002905 561.1366667 10.60333333 16.29666667 0.185338094 9.808236404 6.381673144 0 0 0 0.15 dme-miR-283-5p 6mer2-7 GATATT 3R 12713187 12713192 - 3R_12713187_12713192_- 0.641545814 0.647676138 0.644610976 0.004334777 Men FBtr0082661|FBtr0330025|FBtr0082660 12713101|12713101|12713101 12713471|12713471|12713471 3R - 12713143 12713251 3'utr Men FlyBase G50663.1 AAATGGAATGTCATCAGCTTGCGGCGCGCGATTTTGTATAATGCTAACTATGTAAATGGGATATTGATCTAATAGATATGTAAACAAATTTTATGTAATCTTGAACAAC 818 12713188 0.760165803 21 802 6506 0.979360165 2.375206221 0.682146543 0.163814181 0.294117647 818 17 3 949 3R:12713143-12713251 6 Men FBtr0330025|FBtr0082660|FBtr0082661 12713101|12713101|12713101 12713471|12713471|12713471 GATATT 6mer2-7 dme-miR-283-5p 3R - 12713157 12713244 3'utr Men FlyBase G38290.1 ATGTCATCAGCTTGCGGCGCGCGATTTTGTATAATGCTAACTATGTAAATGGGATATTGATCTAATAGATATGTAAACAAATTTTATG 494 12713188 0.771595117 19 479 3950 0.974160207 2.57634135 0.666666667 0.410931174 0.624031008 494 19 1 754 3R:12713157-12713244 6 636 2609 FBgn0002719 1553 77.69 118.1366667 0.409529942 8.186381774 5.383595271 -4 -4 -4 0.15 dme-miR-305-3p 7mer-A1 TGTGCCA 3R 12950172 12950178 - 3R_12950172_12950178_- 0.78079989 0.779216668 0.780008279 0.001119491 grsm FBtr0082730|FBtr0344095 12950040|12950040 12950195|12950195 3R - 12950139 12950213 stop_codon grsm FlyBase G50683.1 CGCTGGTGCCGCGATTAACTCAGCCTGCCTTTTACTGTGCCACGTGCCTGACTGGATTAACATTTCCATCATTTT 16 12950183 0.982459633 11 14 107 0.842105263 0.726998728 0.315789474 0.1875 0.315789474 16 1 2 16 3R:12950139-12950213 7 grsm FBtr0082730|FBtr0344095 12950040|12950040 12950195|12950195 TGTGCCA 7mer-A1 dme-miR-305-3p 3R - 12950154 12950209 stop_codon grsm FlyBase G38306.1 GGTGCCGCGATTAACTCAGCCTGCCTTTTACTGTGCCACGTGCCTGACTGGATTAA 10 12950195 0.988853232 5 8 64 0.764705882 0.812913357 0.411764706 0.5 0.705882353 10 3 1 13 3R:12950154-12950209 7 4 2610 FBgn0040493 1111.996667 68.50333333 104.3933333 0.003597133 0.058391319 0.038316623 5 17 11 0.15 dme-miR-304-5p 7mer-m8 TGAGATT 3R 12984373 12984379 + 3R_12984373_12984379_+ 0.617461322 0.618116511 0.617788917 0.000463296 Paip2 FBtr0082693 12984239 12985488 3R + 12984113 12984480 stop_codon Paip2 FlyBase G42354.1 CGGACGAGCAGAACACGGCACTTTCCGCACTACCCAAGAGCCAGTGTGATGTTGAAAAGTCTGTTCTGAATCCGATGGCTGATGAGTTTGTTCCGCGTTGTCATGTTATAGATTTCCCTGCCTCATAAAGCCAGCCCATATCTCCTGCCCGCCACAGAATCACAAACTACCCCGAACCCGTACCACGTGGACCTCATACGCGAAAAACCTTAGATAAACTGAAGACCCATTGCTAAGACTAGACTAACAGATTCCGCTAATGAGATTGATATTGATATTCTGACCAAGTTGAGCCAGATGGAGCATTGGGAGCAGTGGCTCATGAATATCTTATTTCTAGATACCAAAATGCTGGAAAAGAAAACTAA 582 12984373 0.96967329 55 560 3164 0.964285714 1.829303773 0.205714286 0.161512027 0.302857143 582 16 9 675 3R:12984113-12984480 7 Paip2 FBtr0082693 12984239 12985488 TGAGATT 7mer-m8 dme-miR-304-5p 3R + 12984213 12984483 stop_codon Paip2 FlyBase G31972.1 TCATGTTATAGATTTCCCTGCCTCATAAAGCCAGCCCATATCTCCTGCCCGCCACAGAATCACAAACTACCCCGAACCCGTACCACGTGGACCTCATACGCGAAAAACCTTAGATAAACTGAAGACCCATTGCTAAGACTAGACTAACAGATTCCGCTAATGAGATTGATATTGATATTCTGACCAAGTTGAGCCAGATGGAGCATTGGGAGCAGTGGCTCATGAATATCTTATTTCTAGATACCAAAATGCTGGAAAAGAAAACTAAATA 347 12984373 0.948630023 33 333 1728 0.954022989 2.220108088 0.168582375 0.342939481 0.563218391 347 22 2 498 3R:12984213-12984483 7 158.5 2611 FBgn0038100 1800.366667 110.8333333 168.6533333 0.088037622 1.430075188 0.939797612 0 0 0 0.15 dme-miR-999-3p 6mer2-7 GTTAAC 3R 12985120 12985125 + 3R_12985120_12985125_+ 0.999998936 0.999999941 0.999999438 7.07E-07 Paip2 FBtr0082693 12984239 12985488 3R + 12985061 12985184 3'utr Paip2 FlyBase G42357.1 TAATCTTTCACCATTGTTAACTCGTTGTACGTTCTATGCCCAAGTAACAAGAAGCGCTTGTTAACCTTCCCTACTGACTCGCAATATTTGTAATTTACCAATATAATCTAGTGAACTAAACGAA 62 12985127 0.754702992 16 60 435 0.974025974 1.875061263 0.155844156 0.177419355 0.337662338 62 2 0 75 3R:12985061-12985184 6 Paip2 FBtr0082693 12984239 12985488 GTTAAC 6mer2-7 dme-miR-999-3p 3R + 12985065 12985151 3'utr Paip2 FlyBase G31974.1 CTTTCACCATTGTTAACTCGTTGTACGTTCTATGCCCAAGTAACAAGAAGCGCTTGTTAACCTTCCCTACTGACTCGCAATATTTGT 39 12985128 0.979524652 12 39 271 1 1.77815125 0.033333333 0.435897436 0.633333333 39 0 0 60 3R:12985065-12985151 6 37 2612 FBgn0038100 1800.366667 110.8333333 168.6533333 0.020551369 0.333834586 0.219384932 -7 -8 -7.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 12985241 12985246 + 3R_12985241_12985246_+ 0.999424482 0.99496918 0.997196831 0.003150373 Paip2 FBtr0082693 12984239 12985488 3R + 12985192 12985305 3'utr Paip2 FlyBase G42358.1 ACTAATGTTTAACGCCTCTTTATACAAACATCATGCATAAATATGTATATCTAGTGTTAATGGAGGAGACAACAGACAACAACAACGCTGCAATAACAAGTAGTTTGTAATTTT 47 12985251 0.951726401 13 44 247 0.944444444 1.707570176 0.111111111 0.14893617 0.259259259 47 3 0 51 3R:12985192-12985305 6 Paip2 FBtr0082693 12984239 12985488 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 12985192 12985305 3'utr Paip2 FlyBase G31975.1 ACTAATGTTTAACGCCTCTTTATACAAACATCATGCATAAATATGTATATCTAGTGTTAATGGAGGAGACAACAGACAACAACAACGCTGCAATAACAAGTAGTTTGTAATTTT 55 12985252 0.961866216 11 43 292 0.811764706 1.537819095 0.070588235 0.381818182 0.6 55 15 1 69 3R:12985192-12985305 6 15.5 2613 FBgn0038100 1800.366667 110.8333333 168.6533333 0.008609357 0.139849624 0.091904498 -10 -11 -10.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 12985473 12985479 + 3R_12985473_12985479_+ 0.741044103 0.738190162 0.739617132 0.002018012 Paip2 FBtr0082693|FBtr0082693|FBtr0082693 12984239|12984239|12984239 12985488|12985488|12985488 3R + 12985356 12985494 3'utr Paip2 FlyBase G42359.1 AATATCGTTAAAATTCGTTTCGGCATGTAGACAAAGATGAATTTCTATTTTTTCAATCAACTTAGATTTAGTGACTTAAGACAGCATTATAAGATCTACTACATTACTTACGTTACGTGTGATATAAAGATACAAAAAA 266 12985468 0.985411281 29 227 1871 0.847560976 1.745074792 0.176829268 0.203007519 0.353658537 266 46 4 278 3R:12985356-12985494 7 Paip2 FBtr0082693|FBtr0082693|FBtr0082693 12984239|12984239|12984239 12985488|12985488|12985488 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 12985409 12985493 3'utr Paip2 FlyBase G31976.2 CAATCAACTTAGATTTAGTGACTTAAGACAGCATTATAAGATCTACTACATTACTTACGTTACGTGTGATATAAAGATACAAAAA 179 12985468 0.692630658 20 160 1228 0.891525424 1.942834494 0.183050847 0.430167598 0.654237288 179 30 2 263 3R:12985409-12985493 7 167.5 2614 FBgn0038100 1800.366667 110.8333333 168.6533333 0.093036604 1.511278195 0.993161515 5 5 5 0.15 dme-miR-965-3p 6mer3-8 TACGCT 3R 12990268 12990273 + 3R_12990268_12990273_+ 0.999999428 0.991974282 0.995986855 0.005674603 CG31342 FBtr0113404 12990027 12991543 3R + 12990256 12990278 3'utr-intron CG31342 FlyBase G42376.1 AAGGAACACCAATACGCTATTTG 14 12990268 0.933052288 3 12 58 0.857142857 0.77815125 0.428571429 0 0 14 1 1 12 3R:12990256-12990278 6 CG31342 FBtr0113404 12990027 12991543 TACGCT 6mer3-8 dme-miR-965-3p 3R + 12990248 12990279 3'utr-intron CG31342 FlyBase G31995.1 AAGATAATAAGGAACACCAATACGCTATTTGT 10 12990268 0.957266759 3 9 43 0.933333333 1.146128036 0.333333333 0.5 0.666666667 10 1 0 14 3R:12990248-12990279 6 12 2615 FBgn0051342 1698.813333 51.87 79.48333333 0.007063754 0.2313476 0.150975047 0 0 0 0.15 dme-miR-995-5p 7mer-m1 ATTCGGG 3R 12990422 12990428 + 3R_12990422_12990428_+ 0.717876316 0.825582255 0.771729285 0.076159643 CG31342 FBtr0113404 12990027 12991543 3R + 12990393 12990467 3'utr CG31342 FlyBase G42377.1 GTGACCGCGAGGGTCAGTGCCTGGGTCTGATTCGGGATGGAAACACTTCGACAATCGTGGATGTGGTGCCAAATA 14 12990422 0.959971955 6 14 75 1 1.204119983 0.4375 0.142857143 0.25 14 0 0 16 3R:12990393-12990467 7 CG31342 FBtr0113404 12990027 12991543 ATTCGGG 7mer-m1 dme-miR-995-5p 3R + 12990402 12990436 3'utr CG31342 FlyBase G31996.1 AGGGTCAGTGCCTGGGTCTGATTCGGGATGGAAAC 5 12990410 0.876938063 2 4 32 0.888888889 0.602059991 0.666666667 0.4 0.666666667 5 0 1 8 3R:12990402-12990436 7 5.5 2616 FBgn0051342 1698.813333 51.87 79.48333333 0.003237554 0.106034317 0.069196897 0 12 6 0.15 dme-miR-7-5p 7mer-m8 GTCTTCC 3R 12990486 12990492 + 3R_12990486_12990492_+ 0.673200388 0.674647316 0.673923852 0.001023113 CG31342 FBtr0113404 12990027 12991543 3R + 12990468 12990499 3'utr CG31342 FlyBase G42378.1 GTTTGGCTGCACGTCACGGTCTTCCGCCCAAG 28 12990489 0.723575395 2 27 141 0.9375 1 0.71875 0.142857143 0.25 28 0 2 30 3R:12990468-12990499 7 CG31342 FBtr0113404 12990027 12991543 GTCTTCC 7mer-m8 dme-miR-7-5p 3R + 12990438 12990499 3'utr CG31342 FlyBase G31997.1 CTTCGACAATCGTGGATGTGGTGCCAAATAGTTTGGCTGCACGTCACGGTCTTCCGCCCAAG 10 12990489 0.780740184 4 10 56 1 1.255272505 0.444444444 0.7 0.833333333 10 0 0 18 3R:12990438-12990499 7 17 2617 FBgn0051342 1698.813333 51.87 79.48333333 0.010006985 0.327742433 0.213881317 -3 -3 -3 0.15 dme-miR-252-5p 7mer-m1 TACTTAG 3R 12990754 12990760 + 3R_12990754_12990760_+ 0.702878973 0.70175224 0.702315606 0.000796768 CG31342 FBtr0113404 12990027 12991543 3R + 12990631 12990771 stop_codon CG31342 FlyBase G42380.1 AAGGATTTCGAGATACGCGACCGCCTGAACTCCGTGGGACGCGATATATCCATTTTGGTGCAACCGTCGGATTTGATAACCAAGCTGAAAAAGCAGCTGAAGTCGCTGCGCGGCTACAAGGATTACTTAGTGCAGTAGTCA 36 12990753 0.965213092 13 33 200 0.931818182 1.612783857 0.318181818 0.222222222 0.363636364 36 3 0 41 3R:12990631-12990771 7 CG31342 FBtr0113404 12990027 12991543 TACTTAG 7mer-m1 dme-miR-252-5p 3R + 12990673 12990818 stop_codon CG31342 FlyBase G31999.1 GATATATCCATTTTGGTGCAACCGTCGGATTTGATAACCAAGCTGAAAAAGCAGCTGAAGTCGCTGCGCGGCTACAAGGATTACTTAGTGCAGTAGTCACTAGCTATAACGAACGATTCCATATAACCACAAATAACTCTCAACTG 42 12990754 0.892877914 17 36 207 0.85483871 0.821185883 0.209677419 0.357142857 0.564516129 42 2 7 53 3R:12990673-12990818 7 17 2618 FBgn0051342 1698.813333 51.87 79.48333333 0.010006985 0.327742433 0.213881317 1 0 0.5 0.15 dme-miR-1002-5p 8mer-A1 CTACTTAA 3R 12990985 12990992 + 3R_12990985_12990992_+ 0.398306083 0.333116294 0.365711188 0.04609615 CG31342 FBtr0113404|FBtr0113403 12990027|12990767 12991543|12991543 3R + 12990936 12991080 3'utr CG31342 FlyBase G42383.1 TTTCGCTATATTACGTACTACACACTACATATATTAACTATGATCGAAACTACTTAAAGGACTTAGGTGTAGCGTTGAGGAACATATACAAAAGCAACCTATATATTTTTTGCAAAACTTTATATAAACTCGTACATATATATAC 45 12990988 0.647602234 21 42 302 0.93220339 1.740362689 0.118644068 0.244444444 0.423728814 45 4 0 55 3R:12990936-12991080 8 CG31342 FBtr0113403|FBtr0113404 12990767|12990027 12991543|12991543 CTACTTAA 8mer-A1 dme-miR-1002-5p 3R + 12990938 12991086 3'utr CG31342 FlyBase G32001.1 TCGCTATATTACGTACTACACACTACATATATTAACTATGATCGAAACTACTTAAAGGACTTAGGTGTAGCGTTGAGGAACATATACAAAAGCAACCTATATATTTTTTGCAAAACTTTATATAAACTCGTACATATATATACAAATTG 34 12990976 0.975967789 20 32 213 0.966101695 1.45484486 0.254237288 0.588235294 0.762711864 34 1 1 57 3R:12990938-12991086 8 21 2619 FBgn0051342 1698.813333 51.87 79.48333333 0.01236157 0.4048583 0.264206333 -3 9 3 0.15 dme-miR-999-3p 7mer-A1 GTTAACA 3R 12991234 12991240 + 3R_12991234_12991240_+ 0.816471552 0.820936786 0.818704169 0.003157373 CG31342 FBtr0113404|FBtr0113403 12990027|12990767 12991543|12991543 3R + 12991173 12991247 3'utr CG31342 FlyBase G42385.1 GAATTTGTTTAGATGCGGAAAAGTTATGAGAAATTTACAACATGAAATTCAAGTATTTTAGGTTAACATATACAC 232 12991230 0.977655096 13 231 2038 0.996183206 2.416640507 0.049618321 0.099137931 0.202290076 232 1 0 261 3R:12991173-12991247 7 CG31342 FBtr0113403|FBtr0113404 12990767|12990027 12991543|12991543 GTTAACA 7mer-A1 dme-miR-999-3p 3R + 12991168 12991251 3'utr CG31342 FlyBase G32003.1 ACCTCGAATTTGTTTAGATGCGGAAAAGTTATGAGAAATTTACAACATGAAATTCAAGTATTTTAGGTTAACATATACACGCGT 187 12991230 0.904181126 12 181 1610 0.971631206 1.738780558 0.042553191 0.368983957 0.581560284 187 4 4 274 3R:12991168-12991251 7 184.5 2620 FBgn0051342 1698.813333 51.87 79.48333333 0.108605222 3.556969346 2.32124135 4 4 4 0.15 dme-miR-79-3p 6mer2-7 AGCTTT 3R 12996927 12996932 - 3R_12996927_12996932_- 0.997080086 0.997425985 0.997253036 0.000244588 CG44194 FBtr0336814|FBtr0344448 12996874|12996874 12997324|12997324 3R - 12996879 12997108 3'utr CG44194 FlyBase G50704.1 GCGCGTGGACAACTTCGAGCAGCTAAACTCCCTGGAGCGACAGGCCCAAGAGTCGAACGTGGTGGCCGCCTTGGTGAGGGATGCCGGGCGCACTCAGCTGGAATCTGGGACAGCAACGGTCCTCGGACTGGGTCCAGCCCCTGCCGAAGATCTAGACAAATTGGTGGCGCATTTGAAGCTTTTGTGAACTCTTAGGTTTATGCAACGTTACAAATAAAGTACAAGTAATC 448 12996917 0.991141742 31 429 4519 0.964552239 1.868392503 0.235074627 0.171875 0.307835821 448 13 6 517 3R:12996879-12997108 6 CG44194 FBtr0344448|FBtr0336814 12996874|12996874 12997324|12997324 AGCTTT 6mer2-7 dme-miR-79-3p 3R - 12996876 12996994 3'utr CG44194 FlyBase G38319.1 AACGGTCCTCGGACTGGGTCCAGCCCCTGCCGAAGATCTAGACAAATTGGTGGCGCATTTGAAGCTTTTGTGAACTCTTAGGTTTATGCAACGTTACAAATAAAGTACAAGTAATCAAC 280 12996917 0.834872537 21 271 2728 0.96882494 2.606381365 0.24940048 0.360714286 0.570743405 280 13 0 404 3R:12996876-12996994 6 328 2621 FBgn0265083 203.1666667 36.95 56.61333333 1.614438064 8.876860622 5.793688177 -15 -15 -15 0.15 dme-bantam-3p 8mer-A1 TGATCTCA 3R 13022979 13022986 + 3R_13022979_13022986_+ 0.631136333 0.631136382 0.631136357 7.07E-08 CtBP FBtr0334513|FBtr0082700|FBtr0082702|FBtr0082699 13021676|13021676|13021676|13021676 13024097|13024097|13024097|13024097 3R + 13022943 13023009 3'utr CtBP FlyBase G42481.1 TATTCTGTTGCTCAAGCTCTGCTCTAATTTACAATATGATCTCATCATTCAAGTTTATTTTCGCCTT 84 13022978 0.759827641 12 81 734 0.973684211 2.045322979 0 0.261904762 0.456140351 84 3 0 111 3R:13022943-13023009 8 CtBP FBtr0082702|FBtr0082699|FBtr0334513|FBtr0082700 13021676|13021676|13021676|13021676 13024097|13024097|13024097|13024097 TGATCTCA 8mer-A1 dme-bantam-3p 3R + 13022944 13023006 3'utr CtBP FlyBase G32078.1 ATTCTGTTGCTCAAGCTCTGCTCTAATTTACAATATGATCTCATCATTCAAGTTTATTTTCGC 63 13022978 0.735181047 11 61 538 0.979381443 1.977723605 0 0.380952381 0.597938144 63 2 0 95 3R:13022944-13023006 8 68 2622 FBgn0020496 3905.446667 142.2566667 217.6 0.017411581 0.478009232 0.3125 1 1 1 0.15 dme-miR-2b-2-5p 6mer2-7 TGAAGA 3R 13025506 13025511 + 3R_13025506_13025511_+ 0.999978139 0.999999833 0.999988986 1.53E-05 CtBP FBtr0334515|FBtr0334516|FBtr0100161|FBtr0334517|FBtr0334514 13025471|13025410|13025471|13025471|13025471 13026275|13026275|13026275|13026275|13026275 3R + 13025471 13025562 stop_codon CtBP FlyBase G42494.1 AGGCATCTGCTGTCCAACTGGCTGCACCTGAGAGCTGAAGAGCTGGAGTTGACGATGACAACGGGCAGTGGCGCAATGGAGTCCAGCACACA 33 13025498 0.871761709 11 33 126 1 1.556302501 0.5 0.090909091 0.166666667 33 0 0 36 3R:13025471-13025562 6 CtBP FBtr0334517|FBtr0334514|FBtr0334515|FBtr0334516|FBtr0100161 13025471|13025471|13025471|13025410|13025471 13026275|13026275|13026275|13026275|13026275 TGAAGA 6mer2-7 dme-miR-2b-2-5p 3R + 13025472 13025522 3'utr CtBP FlyBase G32087.1 GGCATCTGCTGTCCAACTGGCTGCACCTGAGAGCTGAAGAGCTGGAGTTGA 15 13025505 0.850097209 4 15 62 1 1.322219295 0.523809524 0.4 0.571428571 15 0 0 21 3R:13025472-13025522 6 17.5 2623 FBgn0020496 3905.446667 142.2566667 217.6 0.004480922 0.123017082 0.080422794 8 1 4.5 0.15 dme-miR-995-5p 7mer-m8 AATTCGG 3R 13025648 13025654 + 3R_13025648_13025654_+ 0.579414225 0.551872033 0.565643129 0.019475276 CtBP FBtr0334515|FBtr0334516|FBtr0100161|FBtr0334517|FBtr0334514 13025471|13025410|13025471|13025471|13025471 13026275|13026275|13026275|13026275|13026275 3R + 13025593 13025684 3'utr CtBP FlyBase G42495.1 GAGGAGGAGGAGTAGGCGGCGTAGTACGAGCATTGTGGAGCAGTAGACCCCATGGAATTCGGTCCCCAAGGATAAAACTTAACGAGAAACAA 16 13025650 0.957682406 6 14 67 0.857142857 1.255272505 0.19047619 0.25 0.428571429 16 3 0 18 3R:13025593-13025684 7 CtBP FBtr0334517|FBtr0334514|FBtr0334515|FBtr0334516|FBtr0100161 13025471|13025471|13025471|13025410|13025471 13026275|13026275|13026275|13026275|13026275 AATTCGG 7mer-m8 dme-miR-995-5p 3R + 13025625 13025659 3'utr CtBP FlyBase G32088.1 TTGTGGAGCAGTAGACCCCATGGAATTCGGTCCCC 10 13025650 0.726968154 5 9 34 0.941176471 1.204119983 0.176470588 0.5 0.705882353 10 1 0 16 3R:13025625-13025659 7 8.5 2624 FBgn0020496 3905.446667 142.2566667 217.6 0.002176448 0.059751154 0.0390625 -2 -2 -2 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 3R 13026643 13026648 - 3R_13026643_13026648_- 0.829083332 0.48650085 0.657792091 0.242242338 CG12360 FBtr0082718 13026281 13027300 3R - 13026629 13026675 3'utr CG12360 FlyBase G50721.1 AAGTCGTTAGCTAGTACTCTGCAGAATTGTGTTATAAGTGTATAACT 18 13026649 0.826420935 4 18 165 1 1.322219295 0 0.166666667 0.285714286 18 0 0 21 3R:13026629-13026675 6 CG12360 FBtr0082718 13026281 13027300 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 13026595 13026677 3'utr CG12360 FlyBase G38338.1 CCAAGTCGTTAGCTAGTACTCTGCAGAATTGTGTTATAAGTGTATAACTAAAGCTAGAAAAAAAGAGGAATTTTACAAAACGA 25 13026649 0.985563081 6 24 194 0.971428571 1.230448921 0.057142857 0.28 0.485714286 25 0 1 34 3R:13026595-13026677 6 17.5 2625 FBgn0038111 3027.056667 147.83 226.9233333 0.005781193 0.118379219 0.077118557 1 1 1 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 13031554 13031559 + 3R_13031554_13031559_+ 0.894577212 0.983099008 0.93883811 0.062594365 l(3)87Df FBtr0082703 13031448 13031598 3R + 13031532 13031588 3'utr l(3)87Df FlyBase G42502.1 GTGTTGTAAACTACCTTTTGTTACCAAACTTTATAGTAGCCAATATATTATATATAT 6 13031549 0.992026771 4 6 57 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 3R:13031532-13031588 6 l(3)87Df FBtr0082703 13031448 13031598 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 13031517 13031593 3'utr l(3)87Df FlyBase G32095.1 ATTGTTAAATCCCTTGTGTTGTAAACTACCTTTTGTTACCAAACTTTATAGTAGCCAATATATTATATATATGTTGT 13 13031549 0.98811462 9 13 120 1 1.431363764 0 0.692307692 0.851851852 13 0 0 27 3R:13031517-13031593 6 3 2626 FBgn0002354 69.66666667 16.79 25.5 0.043062201 0.178677784 0.117647059 5 5 5 0.15 dme-miR-184-5p 6mer3-8 TGATAA 3R 13262162 13262167 + 3R_13262162_13262167_+ 1 0.999859099 0.999929549 9.96E-05 CG11686 FBtr0082735|FBtr0335222 13262120|13262120 13262227|13262227 3R + 13262143 13262190 3'utr CG11686 FlyBase G42527.1 AATTAACTAAGTGCCTTACTGATAACTCTTGTTTTCAATCATTTTTTA 17 13262159 0.658410539 7 17 153 1 1.322219295 0.047619048 0.176470588 0.333333333 17 0 0 21 3R:13262143-13262190 6 CG11686 FBtr0335222|FBtr0082735 13262120|13262120 13262227|13262227 TGATAA 6mer3-8 dme-miR-184-5p 3R + 13262143 13262182 3'utr CG11686 FlyBase G32118.1 AATTAACTAAGTGCCTTACTGATAACTCTTGTTTTCAATC 20 13262159 0.718139279 5 18 169 0.928571429 1.414973348 0.321428571 0.35 0.535714286 20 2 0 26 3R:13262143-13262182 6 18.5 2627 FBgn0040551 12.66666667 4.276666667 6.6 1.460526316 4.325798909 2.803030303 3 3 3 0.15 dme-miR-184-3p 7mer-A1 CCGTCCA 3R 13269681 13269687 + 3R_13269681_13269687_+ 0.817987034 0.794816435 0.806401734 0.016384088 Su(var)3-7 FBtr0082736 13268891 13270038 3R + 13269653 13269708 3'utr Su(var)3-7 FlyBase G42548.1 GTCCAGAAAGCTGCATAGCTCTTCAATCCCGTCCAGTGTCCGACCGAGTTCTTCGC 168 13269679 0.853542176 4 159 1157 0.950819672 1.638489257 0.371584699 0.089285714 0.163934426 168 6 3 174 3R:13269653-13269708 7 Su(var)3-7 FBtr0082736 13268891 13270038 CCGTCCA 7mer-A1 dme-miR-184-3p 3R + 13269652 13269710 3'utr Su(var)3-7 FlyBase G32132.1 CGTCCAGAAAGCTGCATAGCTCTTCAATCCCGTCCAGTGTCCGACCGAGTTCTTCGCTA 67 13269679 0.80390213 5 60 464 0.918604651 1.596597096 0.313953488 0.268656716 0.430232558 67 6 1 79 3R:13269652-13269710 7 115 2628 FBgn0003598 516.8066667 14.16 21.58 0.222520349 8.121468927 5.329008341 2 2 2 0.15 dme-miR-970-3p 7mer-A1 CTTATGA 3R 13312756 13312762 + 3R_13312756_13312762_+ 0.818406724 0.721879089 0.770142906 0.068255321 CG32473 FBtr0082742|FBtr0082743|FBtr0082744 13312627|13312627|13312627 13312785|13312785|13312785 3R + 13312738 13312767 3'utr CG32473 FlyBase G42559.1 AACGAAGAATTGTGATTGCTTATGATATTT 6 13312754 0.783158235 3 6 45 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3R:13312738-13312767 7 CG32473 FBtr0082744|FBtr0082743|FBtr0082742 13312627|13312627|13312627 13312785|13312785|13312785 CTTATGA 7mer-A1 dme-miR-970-3p 3R + 13312738 13312759 3'utr CG32473 FlyBase G32140.1 AACGAAGAATTGTGATTGCTTA 7 13312754 0.789544453 2 7 42 1 1.176091259 0 0.714285714 0.866666667 7 0 0 15 3R:13312738-13312759 4 6.5 2629 FBgn0052473 306.7266667 12.40666667 19.06 0.021191506 0.523911875 0.341028332 2 2 2 0.15 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 13368808 13368815 + 3R_13368808_13368815_+ 0.622287261 0.622513365 0.622400313 0.000159877 Dic1 FBtr0346113 13368692 13369278 3R + 13368687 13368893 stop_codon Dic1 FlyBase G42565.1 GAATTAGCCGCGATGCCAATCGATACCTTAACTAGGCAATAATTCTCCTTGGCTGGCTGGCAGATTCCCTTGAGCAATGCAACATTCCAGCAGCAATTCGTTCACCGTGTAGAACATAACTTAGCTTTAGCCCGTTCCAGTTGTTAACCAAGATGCTTTTATGCTAGCAAAATATTTGTTGTTAAGCGTTCAATGCCCGCTATCCCG 214 13368807 0.938636262 25 212 1540 0.992125984 1.924279286 0.255905512 0.135514019 0.271653543 214 0 2 252 3R:13368687-13368893 8 Dic1 FBtr0082748|FBtr0082747|FBtr0346113 13368692|13368692|13368692 13369091|13369091|13369278 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R + 13368780 13368832 3'utr Dic1 FlyBase G32146.1 CAATTCGTTCACCGTGTAGAACATAACTTAGCTTTAGCCCGTTCCAGTTGTTA 112 13368807 0.797299998 6 108 746 0.98816568 2.222716471 0.26035503 0.392857143 0.597633136 112 2 0 167 3R:13368780-13368832 8 127 2630 FBgn0027610 272.8866667 21.36 32.8 0.465394669 5.945692884 3.87195122 1 1 1 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 13429312 13429319 - 3R_13429312_13429319_- 0.497408981 0.499238648 0.498323815 0.001293723 yrt FBtr0114375|FBtr0114374|FBtr0114376|FBtr0082793 13428865|13428865|13428865|13428865 13429604|13429604|13430186|13429604 3R - 13429309 13429369 3'utr yrt FlyBase G50773.2 TATATCATATACACCGATGCGATATCGAGGAACGAAATGTGCTAAACCGTGTACTTAATAA 44 13429320 0.827045185 6 39 221 0.892857143 1.096910013 0.553571429 0.227272727 0.392857143 44 3 3 50 3R:13429309-13429369 8 yrt FBtr0114376|FBtr0082793|FBtr0114375|FBtr0114374 13428865|13428865|13428865|13428865 13430186|13429604|13429604|13429604 GTACTTAA 8mer-A1 dme-miR-252-5p 3R - 13429309 13429359 3'utr yrt FlyBase G38379.1 ACACCGATGCGATATCGAGGAACGAAATGTGCTAAACCGTGTACTTAATAA 28 13429320 0.803492703 5 26 135 0.977272727 1.633468456 0.727272727 0.464285714 0.659090909 28 1 0 43 3R:13429309-13429359 8 24.5 2631 FBgn0004049 300.3333333 8.753333333 13.46333333 0.081576027 2.79893374 1.819757366 1 1 1 0.15 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 13429721 13429728 - 3R_13429721_13429728_- 0.631091425 0.631085219 0.631088322 4.38E-06 yrt FBtr0114376 13428865 13430186 3R - 13429603 13429761 stop_codon yrt FlyBase G50776.1 GAGCAATTATCCGGACAGCAGTCGCATTCCGTTTCCGTCCAGCAGCAACAGCAAAGACATGGTATCGCCCTGGCTGGTTTCCTCGGAGGTGGTATCGGCACCCAAGGGACGCGAGTCGGCCATCATTCGAAAATCCGTTATTACAACCCAGTTGTAATT 421 13429729 0.970743294 14 415 2392 0.985263158 1.971275849 0.170526316 0.116389549 0.216842105 421 3 4 468 3R:13429603-13429761 8 yrt FBtr0114376 13428865 13430186 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R - 13429659 13429767 3'utr yrt FlyBase G38382.1 AACTCCGAGCAATTATCCGGACAGCAGTCGCATTCCGTTTCCGTCCAGCAGCAACAGCAAAGACATGGTATCGCCCTGGCTGGTTTCCTCGGAGGTGGTATCGGCACCC 252 13429729 0.987630833 10 251 1384 0.997409326 2.284430734 0.170984456 0.396825397 0.606217617 252 0 1 385 3R:13429659-13429767 8 326 2632 FBgn0004049 300.3333333 8.753333333 13.46333333 1.085460599 37.24295506 24.21391434 1 1 1 0.15 dme-miR-965-3p 6mer3-8 TACGCT 3R 13635299 13635304 - 3R_13635299_13635304_- 0.906721815 0.506360756 0.706541286 0.283097978 sqd FBtr0309094|FBtr0082856 13634860|13635190 13636454|13636454 3R - 13635262 13635320 3'utr sqd FlyBase G50790.1 TTCCGGATATGTGTATTACGCTCATAGACTACATATATACATACATAATACATAATACA 40 13635305 0.669475145 5 38 313 0.954545455 1.62324929 0.136363636 0.1 0.181818182 40 2 0 42 3R:13635262-13635320 6 sqd FBtr0309094|FBtr0082856 13634860|13635190 13636454|13636454 TACGCT 6mer3-8 dme-miR-965-3p 3R - 13635257 13635317 3'utr sqd FlyBase G38391.1 CGGATATGTGTATTACGCTCATAGACTACATATATACATACATAATACATAATACATCTAT 14 13635296 0.980421074 5 13 98 0.952380952 1.301029996 0.142857143 0.357142857 0.571428571 14 1 0 20 3R:13635257-13635317 6 25 2633 FBgn0263396 13095.56667 400.09 616.6433333 0.001909043 0.062485941 0.040542075 1 -8 -3.5 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 3R 13635508 13635513 - 3R_13635508_13635513_- 0.946261494 0.999970731 0.973116113 0.03797814 sqd FBtr0309094|FBtr0082856 13634860|13635190 13636454|13636454 3R - 13635464 13635531 3'utr sqd FlyBase G50791.1 AAACAAAAGAAGCAAGCATTGACTGGCTGGCACATCGGGTTGCCTTCTTCCCGTTCGATTGAGAAAAA 39 13635513 0.922067006 6 39 135 1 1.740362689 0.2 0.333333333 0.527272727 39 0 0 55 3R:13635464-13635531 6 sqd FBtr0309094|FBtr0082856 13634860|13635190 13636454|13636454 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 13635425 13635525 3'utr sqd FlyBase G38392.1 AAGAAGCAAGCATTGACTGGCTGGCACATCGGGTTGCCTTCTTCCCGTTCGATTGAGAAAAACTATATACGATATTCGATATACGATATACGACAAGACAC 23 13635512 0.951880423 9 23 102 1 1.544068044 0 0.347826087 0.571428571 23 0 0 35 3R:13635425-13635525 6 26 2634 FBgn0263396 13095.56667 400.09 616.6433333 0.001985405 0.064985378 0.042163758 0 -1 -0.5 0.15 dme-miR-14-3p 6mer2-7 AGACTG 3R 13636184 13636189 - 3R_13636184_13636189_- 0.950556028 0.965944275 0.958250151 0.010881171 sqd FBtr0309094|FBtr0082856|FBtr0082857|FBtr0082855 13634860|13635190|13636041|13635697 13636454|13636454|13636454|13636454 3R - 13636161 13636212 3'utr sqd FlyBase G50795.2 AATGAGGAAAAAAGGAAATGAATAGACTGGCTGGCTGGGAGCAATAATATCA 378 13636190 0.83408203 6 368 1431 0.976798144 2.022222105 0.269141531 0.12962963 0.236658933 378 7 3 421 3R:13636161-13636212 6 sqd FBtr0082855|FBtr0082857|FBtr0309094|FBtr0082856 13635697|13636041|13634860|13635190 13636454|13636454|13636454|13636454 AGACTG 6mer2-7 dme-miR-14-3p 3R - 13636139 13636222 3'utr sqd FlyBase G38394.1 GTATGAAAGAAATGAGGAAAAAAGGAAATGAATAGACTGGCTGGCTGGGAGCAATAATATCAACATCAGCAACCTTAACACACC 222 13636190 0.938006933 6 214 831 0.973941368 2.475671188 0.25732899 0.306306306 0.498371336 222 8 0 299 3R:13636139-13636222 6 296.5 2635 FBgn0263396 13095.56667 400.09 616.6433333 0.02264125 0.741083256 0.480829004 1 1 1 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 3R 13639898 13639903 - 3R_13639898_13639903_- 0.745891788 0.726585124 0.736238456 0.013651898 sqd FBtr0082854 13637716 13642188 3R - 13639792 13639926 3'utr sqd FlyBase G50804.1 TGTTGTCAATGTGCGTCGACAATTTGACTGTATACCAATTATATATACATTTGTACATTTACATACACCTTTAATCATAAACTTTGAGTAAATTGTTTTACAAAGAAATTGCATGTTTCTCAATGTTTTTAGCAA 22 13639896 0.984377038 13 22 174 1 1.462397998 0.275862069 0.227272727 0.413793103 22 0 0 29 3R:13639792-13639926 6 sqd FBtr0082854 13637716 13642188 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 13639881 13639923 3'utr sqd FlyBase G38403.1 TGTCAATGTGCGTCGACAATTTGACTGTATACCAATTATATAT 20 13639902 0.962089656 5 17 137 0.928571429 1.414973348 0.428571429 0.4 0.571428571 20 2 0 26 3R:13639881-13639923 6 15.5 2636 FBgn0263396 13095.56667 400.09 616.6433333 0.001183607 0.038741283 0.025136086 -7 -1 -4 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 3R 13640404 13640410 - 3R_13640404_13640410_- 0.620163634 0.620204259 0.620183946 2.88E-05 sqd FBtr0082854 13637716 13642188 3R - 13640378 13640472 3'utr sqd FlyBase G50806.1 ACCACTGCTGCAGCACCCCCCCGCAGCCTCATTCGTTAGATCGTTCTTTTATTTGCTTTATTTGCATTTCCGCTGCACTTTCTTGACCAAAACGT 26 13640411 0.930024362 10 25 268 0.939393939 1.491361694 0.303030303 0.230769231 0.393939394 26 2 0 31 3R:13640378-13640472 7 sqd FBtr0082854 13637716 13642188 TGCATTT 7mer-m8 dme-miR-277-3p 3R - 13640393 13640430 3'utr sqd FlyBase G38407.1 GTTCTTTTATTTGCTTTATTTGCATTTCCGCTGCACTT 7 13640412 0.646496213 5 7 88 1 1 0.6 0.428571429 0.6 7 0 0 10 3R:13640393-13640430 7 12.5 2637 FBgn0263396 13095.56667 400.09 616.6433333 0.000954522 0.03124297 0.020271037 1 2 1.5 0.15 dme-miR-33-5p 7mer-m8 CAATGCA 3R 13640735 13640741 - 3R_13640735_13640741_- 0.673116743 0.671037451 0.672077097 0.001470216 sqd FBtr0082854 13637716 13642188 3R - 13640728 13640779 3'utr sqd FlyBase G50809.1 TTATTATTCCGGCAACGGGATAATATTCACGTTCTTTGCAATGCATATGTTT 7 13640734 0.892321635 5 6 64 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 3R:13640728-13640779 7 sqd FBtr0082854 13637716 13642188 CAATGCA 7mer-m8 dme-miR-33-5p 3R - 13640720 13640752 3'utr sqd FlyBase G38410.1 CACGTTCTTTGCAATGCATATGTTTTCGTATGC 8 13640745 0.686614291 6 7 63 0.833333333 1 0 0.5 0.666666667 8 2 0 10 3R:13640720-13640752 7 6 2638 FBgn0263396 13095.56667 400.09 616.6433333 0.00045817 0.014996626 0.009730098 -7 4 -1.5 0.15 dme-miR-79-3p 6mer2-7 AGCTTT 3R 13640847 13640852 - 3R_13640847_13640852_- 0.9999962 0.63589144 0.81794382 0.257460973 sqd FBtr0082854 13637716 13642188 3R - 13640785 13640869 3'utr sqd FlyBase G50810.1 ACGAAACGCGTAATCAAAGCTTTGATTCAATGTCTATTTAAATATATATATACCTTATATATAGCATATAAATATATTTTTAGAT 22 13640844 0.982584461 9 21 164 0.964285714 1.130333768 0.714285714 0.272727273 0.428571429 22 0 1 27 3R:13640785-13640869 6 sqd FBtr0082854 13637716 13642188 AGCTTT 6mer2-7 dme-miR-79-3p 3R - 13640780 13640862 3'utr sqd FlyBase G38411.1 GCGTAATCAAAGCTTTGATTCAATGTCTATTTAAATATATATATACCTTATATATAGCATATAAATATATTTTTAGATACATA 13 13640844 0.980723928 8 13 98 1 1.342422681 0.636363636 0.384615385 0.636363636 13 0 0 22 3R:13640780-13640862 6 13.5 2639 FBgn0263396 13095.56667 400.09 616.6433333 0.001030883 0.033742408 0.02189272 -8 -8 -8 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 13641265 13641271 - 3R_13641265_13641271_- 0.823215012 0.82319211 0.823203561 1.62E-05 sqd FBtr0082854 13637716 13642188 3R - 13641254 13641294 3'utr sqd FlyBase G50812.1 CTTGGTTGCCTTCAACAGACTTTCCAAAGATGACAAATACC 14 13641273 0.673489021 4 14 59 1 1.278753601 0.052631579 0.214285714 0.421052632 14 0 0 19 3R:13641254-13641294 7 sqd FBtr0082854 13637716 13642188 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 13641247 13641285 3'utr sqd FlyBase G38414.1 CTTCAACAGACTTTCCAAAGATGACAAATACCTCAAACG 8 13641273 0.912057784 3 8 26 1 1.204119983 0.1875 0.375 0.6875 8 0 0 16 3R:13641247-13641285 7 10.5 2640 FBgn0263396 13095.56667 400.09 616.6433333 0.000801798 0.026244095 0.017027671 2 2 2 0.15 dme-miR-190-5p 6mer3-8 ACATAT 3R 13641738 13641743 - 3R_13641738_13641743_- 0.999999999 0.800337989 0.900168994 0.141182354 sqd FBtr0082854 13637716 13642188 3R - 13641739 13641806 3'utr sqd FlyBase G50816.1 AAGAAAACTTTTAAAAATTGTAGATTTGAAAGAGAGAAAACAAGAAACATTTCTTTAATGCTAACATA 23 13641755 0.756252367 10 23 147 1 1.447158031 0.035714286 0.173913043 0.321428571 23 0 0 28 3R:13641739-13641806 4 sqd FBtr0082854 13637716 13642188 ACATAT 6mer3-8 dme-miR-190-5p 3R - 13641722 13641806 3'utr sqd FlyBase G38418.1 AAGAAAACTTTTAAAAATTGTAGATTTGAAAGAGAGAAAACAAGAAACATTTCTTTAATGCTAACATATAAATTTTAATCTAATC 15 13641756 0.972085511 9 15 91 1 1.380211242 0.125 0.4 0.625 15 0 0 24 3R:13641722-13641806 6 3 2641 FBgn0263396 13095.56667 400.09 616.6433333 0.000229085 0.007498313 0.004865049 12 13 12.5 0.15 dme-miR-7-5p 7mer-A1 TCTTCCA 3R 13651681 13651687 + 3R_13651681_13651687_+ 0.76759068 0.70294013 0.735265405 0.045714878 rin FBtr0346347|FBtr0082797|FBtr0082799|FBtr0346346 13651565|13651565|13651565|13651565 13654527|13652413|13652413|13652413 3R + 13651596 13651734 3'utr rin FlyBase G42600.1 AAAGCATCAACAAATGAGCAACGGCAGCAGTAGCGACTATAACATCAAGAACAGCAGCAACAACCCAACGTTAAAAACATCGACTTCTTCCACAATGCAATCAATCAATTACATTCAAGAACATCTCATGCAATTAAAC 68 13651683 0.952372698 13 64 291 0.951219512 1.591064607 0.036585366 0.191176471 0.329268293 68 3 1 78 3R:13651596-13651734 7 rin FBtr0082799|FBtr0346346|FBtr0346347|FBtr0082797 13651565|13651565|13651565|13651565 13652413|13652413|13654527|13652413 TCTTCCA 7mer-A1 dme-miR-7-5p 3R + 13651642 13651772 3'utr rin FlyBase G32182.2 AAGAACAGCAGCAACAACCCAACGTTAAAAACATCGACTTCTTCCACAATGCAATCAATCAATTACATTCAAGAACATCTCATGCAATTAAACACACGCAAATCACACACTCATACACTAAGATAAAGTAG 40 13651683 0.956057617 15 37 191 0.933333333 1.748188027 0.066666667 0.325 0.55 40 4 0 56 3R:13651642-13651772 7 24 2642 FBgn0015778 4641.9 120.1133333 185.17 0.005170297 0.199811289 0.129610628 -2 -2 -2 0.15 dme-miR-276a-3p 6mer2-7 GTTCCT 3R 13651808 13651813 + 3R_13651808_13651813_+ 0.999992458 0.99983446 0.999913459 0.000111723 rin FBtr0346347|FBtr0082797|FBtr0082799|FBtr0346346 13651565|13651565|13651565|13651565 13654527|13652413|13652413|13652413 3R + 13651785 13651825 3'utr rin FlyBase G42601.1 AAAACGTCAACTGTCCTTTAAATGTTCCTGAGCGCAACTCT 17 13651806 0.685274808 4 14 127 0.80952381 1.230448921 0.19047619 0.235294118 0.380952381 17 4 0 17 3R:13651785-13651825 6 rin FBtr0082799|FBtr0346346|FBtr0346347|FBtr0082797 13651565|13651565|13651565|13651565 13652413|13652413|13654527|13652413 GTTCCT 6mer2-7 dme-miR-276a-3p 3R + 13651785 13651825 3'utr rin FlyBase G32183.1 AAAACGTCAACTGTCCTTTAAATGTTCCTGAGCGCAACTCT 21 13651806 0.728463717 4 18 142 0.806451613 0.795880017 0.193548387 0.380952381 0.580645161 21 3 3 25 3R:13651785-13651825 6 14.5 2643 FBgn0015778 4641.9 120.1133333 185.17 0.003123721 0.120719321 0.078306421 2 2 2 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3R 13652792 13652797 + 3R_13652792_13652797_+ 0.986227531 0.906678536 0.946453033 0.056249637 rin FBtr0346347 13651565 13654527 3R + 13652756 13652832 3'utr rin FlyBase G42608.1 AAACCTTTTGCTACTTAAATCTAATTTGCAGACTAGCTAGTCTATATAGGTATCGTATCGGTTCGAAACGGTTCGGT 10 13652799 0.985772016 6 9 77 1 1.041392685 0.181818182 0.1 0.181818182 10 0 0 11 3R:13652756-13652832 6 rin FBtr0346347 13651565 13654527 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3R + 13652736 13652819 3'utr rin FlyBase G32190.1 CGCCGCATTTTAGAGCCTGTAAACCTTTTGCTACTTAAATCTAATTTGCAGACTAGCTAGTCTATATAGGTATCGTATCGGTTC 8 13652764 0.982417017 7 7 60 1 0.954242509 0.111111111 0.125 0.222222222 8 0 0 9 3R:13652736-13652819 6 4.5 2644 FBgn0015778 4641.9 120.1133333 185.17 0.000969431 0.037464617 0.024301993 -7 28 10.5 0.15 dme-miR-995-5p 6mer3-8 AATTCG 3R 13657907 13657912 - 3R_13657907_13657912_- 0.993721913 0.984720115 0.989221014 0.006365234 Hrb87F FBtr0300590|FBtr0082851|FBtr0334495 13657793|13657322|13656844 13658466|13658466|13658466 3R - 13657853 13657941 3'utr Hrb87F FlyBase G50834.1 GCTGCTATCTCTCTTTTGTAACCATTAATAATTCGCTGATCGATTTATGTTTAGGGTCCTAAGAACCCCGAACGCTTAGTTTTAACCAT 29 13657897 0.989395087 13 27 255 0.931034483 1.431363764 0.172413793 0 0 29 2 0 27 3R:13657853-13657941 6 Hrb87F FBtr0334495|FBtr0300590|FBtr0082851 13656844|13657793|13657322 13658466|13658466|13658466 AATTCG 6mer3-8 dme-miR-995-5p 3R - 13657883 13657915 3'utr Hrb87F FlyBase G38431.2 AATAATTCGCTGATCGATTTATGTTTAGGGTCC 7 13657895 0.649953509 4 6 59 0.916666667 1.041392685 0 0.428571429 0.666666667 7 1 0 11 3R:13657883-13657915 6 11.5 2645 FBgn0004237 959.7066667 53.14666667 81.73 0.011982828 0.216382338 0.140707207 -15 -17 -16 0.15 dme-miR-304-5p 6mer2-7 GAGATT 3R 13663476 13663481 + 3R_13663476_13663481_+ 0.975192362 0.98051262 0.977852491 0.003761949 B52 FBtr0300588|FBtr0082804 13663107|13663107 13666891|13666891 3R + 13663458 13663505 stop_codon B52 FlyBase G42618.1 TTGATGTGCTTTGACTGAGAGATTCCCTCCTCGGCTTGGGGCCGAATC 16 13663480 0.813463016 3 14 103 0.913043478 1.322219295 0 0.375 0.565217391 16 2 0 21 3R:13663458-13663505 6 B52 FBtr0082804|FBtr0300588 13663107|13663107 13666891|13666891 GAGATT 6mer2-7 dme-miR-304-5p 3R + 13663453 13663505 stop_codon B52 FlyBase G32198.1 AGAGTTTGATGTGCTTTGACTGAGAGATTCCCTCCTCGGCTTGGGGCCGAATC 11 13663480 0.97292806 3 11 70 1 1.230448921 0.352941176 0.363636364 0.588235294 11 0 0 17 3R:13663453-13663505 6 13 2646 FBgn0004587 2711.693333 191.7166667 292.1666667 0.004794052 0.067808398 0.044495151 -4 -4 -4 0.15 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 13663539 13663545 + 3R_13663539_13663545_+ 0.700357253 0.581290806 0.64082403 0.08419273 B52 FBtr0300588|FBtr0082804|FBtr0300586|FBtr0082803 13663107|13663107|13663474|13663474 13666891|13666891|13666891|13666891 3R + 13663518 13663557 5'utr B52 FlyBase G42619.1 AGAATCAAATCTAATTGAATCGCTGTGAGAAAGACAAGCT 7 13663535 0.964573348 3 6 31 0.857142857 0.77815125 0 0 0 7 1 0 6 3R:13663518-13663557 7 B52 FBtr0082803|FBtr0300586|FBtr0082804|FBtr0300588 13663474|13663474|13663107|13663107 13666891|13666891|13666891|13666891 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R + 13663513 13663584 5'utr B52 FlyBase G32199.1 GAAAGAGAATCAAATCTAATTGAATCGCTGTGAGAAAGACAAGCTAGTCTAGTGACCGACCGACCGGTTCAG 8 13663534 0.945741218 4 7 35 0.923076923 0.77815125 0.307692308 0.25 0.538461538 8 0 1 12 3R:13663513-13663584 7 5.5 2647 FBgn0004587 2711.693333 191.7166667 292.1666667 0.002028253 0.028688168 0.018824872 4 5 4.5 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3R 13675253 13675259 - 3R_13675253_13675259_- 0.520782804 0.520845306 0.520814055 4.42E-05 CG9588 FBtr0082849 13675090 13675502 3R - 13675114 13675292 3'utr CG9588 FlyBase G50842.1 AAGGTGCACAGGTGACAGGCAAAAGGATGATATTGTGATTCGGTGGATTCTGTCGACATGACCGATTTTTTTTGCATTTAATTTTCATTCAATATGAAATGATGCGTAACAAAATGATGAGGCGGTTTTACTAACAAATAAGTTTTTATAGCGCTTTTACTGGTAAATAAAGAAGGATA 169 13675260 0.902794834 20 160 1327 0.940594059 1.433655561 0.361386139 0.159763314 0.297029703 169 6 6 190 3R:13675114-13675292 7 CG9588 FBtr0082849 13675090 13675502 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 13675208 13675276 3'utr CG9588 FlyBase G38439.1 AGGCAAAAGGATGATATTGTGATTCGGTGGATTCTGTCGACATGACCGATTTTTTTTGCATTTAATTTT 115 13675260 0.692813686 10 108 891 0.941176471 1.505149978 0.294117647 0.365217391 0.570588235 115 6 4 160 3R:13675208-13675276 7 111 2648 FBgn0038166 196.9933333 19.93666667 30.61666667 0.563470845 5.567630831 3.62547632 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 13692361 13692366 + 3R_13692361_13692366_+ 0.928554833 0.95361757 0.941086201 0.017722076 flfl FBtr0114604|FBtr0114604|FBtr0114604 13691732|13691732|13691732 13693905|13693905|13693905 3R + 13692346 13692424 3'utr flfl FlyBase G42665.1 ATGAGTTAACAGATCCTGTGAAGTTGGCTGCTGGCCCAGAATGTTTGTGCAATACTTTCGTGTCGATATTTAAATAACA 11 13692370 0.983799174 5 10 89 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 3R:13692346-13692424 6 flfl FBtr0114604|FBtr0114604|FBtr0114604 13691732|13691732|13691732 13693905|13693905|13693905 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 13692328 13692405 3'utr flfl FlyBase G32232.1 TCTATCGTATGAGATCGTATGAGTTAACAGATCCTGTGAAGTTGGCTGCTGGCCCAGAATGTTTGTGCAATACTTTCG 9 13692390 0.981659948 7 9 66 1 1.113943352 0.384615385 0.333333333 0.538461538 9 0 0 13 3R:13692328-13692405 6 6 2649 FBgn0024555 2089.806667 50.89333333 77.96333333 0.002871079 0.117893634 0.076959254 -9 -29 -19 0.15 dme-miR-34-5p 6mer2-7 ACTGCC 3R 13692856 13692861 + 3R_13692856_13692861_+ 0.720335583 0.638175793 0.679255688 0.058095752 flfl FBtr0114604 13691732 13693905 3R + 13692778 13692882 3'utr flfl FlyBase G42667.1 GAGTTAAATGCAGATAACACTTGAACCCAATGAACCTTGTATATAATTTAGTCACTCTCAATGCGCGATTAGTTGATAACTGCCCTTGCACCACTGACGCCGACA 17 13692864 0.975233214 11 15 94 0.925925926 1.397940009 0.111111111 0.411764706 0.62962963 17 2 0 25 3R:13692778-13692882 6 flfl FBtr0114604 13691732 13693905 ACTGCC 6mer2-7 dme-miR-34-5p 3R + 13692783 13692877 3'utr flfl FlyBase G32233.1 AAATGCAGATAACACTTGAACCCAATGAACCTTGTATATAATTTAGTCACTCTCAATGCGCGATTAGTTGATAACTGCCCTTGCACCACTGACGC 16 13692856 0.974059463 9 14 95 0.916666667 1.342422681 0.041666667 0.375 0.583333333 16 2 0 22 3R:13692783-13692877 6 5.5 2650 FBgn0024555 2089.806667 50.89333333 77.96333333 0.002631822 0.108069164 0.070545983 -8 0 -4 0.15 dme-miR-283-5p 6mer3-8 TGATAT 3R 13693724 13693729 + 3R_13693724_13693729_+ 0.999279169 0.999999979 0.999639574 0.000509683 flfl FBtr0114604 13691732 13693905 3R + 13693671 13693771 3'utr flfl FlyBase G42672.1 AGCGACAACACTATAGTTTATACATAGTATTTATATGAATCGTGTATTGTATATGATATGCTGTCTAATCCCTAATCCTAACACATACCCATTACGTCTAT 15 13693729 0.987087292 8 15 133 1 1.204119983 0.0625 0.066666667 0.125 15 0 0 16 3R:13693671-13693771 6 flfl FBtr0114604 13691732 13693905 TGATAT 6mer3-8 dme-miR-283-5p 3R + 13693706 13693773 3'utr flfl FlyBase G32239.1 TGAATCGTGTATTGTATATGATATGCTGTCTAATCCCTAATCCTAACACATACCCATTACGTCTATAA 16 13693728 0.84123054 8 13 133 0.92 1.361727836 0.08 0.4375 0.64 16 2 0 23 3R:13693706-13693773 6 11 2651 FBgn0024555 2089.806667 50.89333333 77.96333333 0.005263645 0.216138329 0.141091966 -5 -4 -4.5 0.15 dme-miR-184-3p 7mer-m8 TCCGTCC 3R 13838462 13838468 - 3R_13838462_13838468_- 0.658311949 0.650829676 0.654570812 0.005290714 CG31495 FBtr0082882|FBtr0344765 13838238|13838433 13838773|13838773 3R - 13838435 13838479 3'utr CG31495 FlyBase G50877.1 ACGGAGAGCATTCCGTCCTCCAGGAGTTCGGTGACCGGTGGGCCC 16 13838469 0.957978414 3 15 79 0.947368421 1.255272505 0.157894737 0.1875 0.315789474 16 1 0 18 3R:13838435-13838479 7 CG31495 FBtr0344765|FBtr0082882 13838433|13838238 13838773|13838773 TCCGTCC 7mer-m8 dme-miR-184-3p 3R - 13838446 13838479 3'utr CG31495 FlyBase G38461.1 ACGGAGAGCATTCCGTCCTCCAGGAGTTCGGTGA 11 13838469 0.934862986 2 11 57 1 1.176091259 0.4 0.272727273 0.466666667 11 0 0 15 3R:13838446-13838479 7 13 2652 FBgn0051495 85.87 7.076666667 10.89333333 0.151391639 1.837023081 1.193390453 1 1 1 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3R 13838559 13838565 - 3R_13838559_13838565_- 0.443130901 0.442933557 0.443032229 0.000139512 CG31495 FBtr0082882|FBtr0344765 13838238|13838433 13838773|13838773 3R - 13838545 13838582 3'utr CG31495 FlyBase G50878.1 AATGAACAGCCCGATAATGTGATTGCAAAGATACTAGA 12 13838559 0.70531292 3 11 70 0.916666667 1.041392685 0.166666667 0 0 12 1 0 11 3R:13838545-13838582 7 CG31495 FBtr0344765|FBtr0082882 13838433|13838238 13838773|13838773 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 13838545 13838581 3'utr CG31495 FlyBase G38462.1 ATGAACAGCCCGATAATGTGATTGCAAAGATACTAGA 15 13838559 0.763889428 3 14 84 0.92 1.361727836 0 0.533333333 0.72 15 2 0 23 3R:13838545-13838581 7 13.5 2653 FBgn0051495 85.87 7.076666667 10.89333333 0.157214394 1.907677814 1.239290086 -6 -6 -6 0.15 dme-miR-11-3p 7mer-m1 TGTGATG 3R 13968379 13968385 - 3R_13968379_13968385_- 0.612020969 0.61184967 0.611935319 0.000121127 rdx FBtr0334298|FBtr0301632|FBtr0301634|FBtr0100361 13967059|13967953|13967953|13967953 13969185|13969185|13969185|13969185 3R - 13968349 13968408 3'utr rdx FlyBase G50886.1 AATTACAAAGCGTACACTTTGATTGTGATGTATATTCGATGAGTATGACTAATGAGTAAC 39 13968386 0.890507163 9 36 344 0.94 1.194976603 0.24 0.256410256 0.42 39 1 2 47 3R:13968349-13968408 7 rdx FBtr0301634|FBtr0100361|FBtr0301632|FBtr0334298 13967953|13967953|13967953|13967059 13969185|13969185|13969185|13969185 TGTGATG 7mer-m1 dme-miR-11-3p 3R - 13968349 13968408 3'utr rdx FlyBase G38468.1 AATTACAAAGCGTACACTTTGATTGTGATGTATATTCGATGAGTATGACTAATGAGTAAC 27 13968386 0.987803012 10 27 264 1 1.579783597 0.157894737 0.37037037 0.552631579 27 0 0 38 3R:13968349-13968408 7 29 2654 FBgn0264493 1241.27 56.45333333 86.81 0.023363168 0.51369863 0.334062896 1 1 1 0.15 dme-miR-33-5p 7mer-A1 AATGCAA 3R 13968850 13968856 - 3R_13968850_13968856_- 0.778479935 0.726527506 0.752503721 0.036735894 rdx FBtr0334298|FBtr0301632|FBtr0301633|FBtr0301634|FBtr0100361 13967059|13967953|13968623|13967953|13967953 13969185|13969185|13969185|13969185|13969185 3R - 13968810 13968875 3'utr rdx FlyBase G50889.1 ATGTTAAACGCAGACAGATAATGCAAATGCAGGAGCAAAAGCATAGCGAGCCGTACCGTTTATTGT 46 13968857 0.838817188 7 45 117 0.980769231 1.707570176 0.192307692 0.108695652 0.211538462 46 1 0 51 3R:13968810-13968875 7 rdx FBtr0301634|FBtr0100361|FBtr0301632|FBtr0301633|FBtr0334298 13967953|13967953|13967953|13968623|13967059 13969185|13969185|13969185|13969185|13969185 AATGCAA 7mer-A1 dme-miR-33-5p 3R - 13968812 13968870 3'utr rdx FlyBase G38470.1 AAACGCAGACAGATAATGCAAATGCAGGAGCAAAAGCATAGCGAGCCGTACCGTTTATT 16 13968857 0.849053774 4 16 38 1 1.342422681 0.227272727 0.3125 0.5 16 0 0 22 3R:13968812-13968870 7 27.5 2655 FBgn0264493 1241.27 56.45333333 86.81 0.022154729 0.487128011 0.316783781 1 1 1 0.15 dme-miR-307a-3p 7mer-m8 GGTTGTG 3R 14034560 14034566 + 3R_14034560_14034566_+ 0.698542003 0.701806193 0.700174098 0.002308138 CG3061 FBtr0082869 14034491 14035041 3R + 14034496 14034615 3'utr CG3061 FlyBase G42701.1 AGTTAATGCTATCACACGAAAAGCTACTCCTCAAATCCACCACTATTTGAAACCTTAACTGCTGGGTTGTGTAGTTATTGCATATTTTGCTTTAGTTGTTATAAATGAATTTCATTGTCT 21 14034573 0.991038884 15 18 177 0.913043478 1.021189299 0.217391304 0.095238095 0.173913043 21 1 1 21 3R:14034496-14034615 7 CG3061 FBtr0082869 14034491 14035041 GGTTGTG 7mer-m8 dme-miR-307a-3p 3R + 14034545 14034579 3'utr CG3061 FlyBase G32265.2 AAACCTTAACTGCTGGGTTGTGTAGTTATTGCATA 5 14034564 0.530392835 3 3 41 0.8 0.903089987 0.3 0.8 0.9 5 2 0 8 3R:14034545-14034579 7 5 2656 FBgn0038195 1209.576667 74.17333333 113.5466667 0.004133678 0.067409671 0.044034758 -13 -4 -8.5 0.15 dme-miR-965-3p 6mer3-8 TACGCT 3R 14119310 14119315 - 3R_14119310_14119315_- 0.985272218 0.995991781 0.990631999 0.007579902 Abi FBtr0112896|FBtr0337096|FBtr0082910|FBtr0337097|FBtr0307077|FBtr0307076 14119260|14119260|14119260|14119260|14119260|14119260 14120064|14120064|14120064|14120064|14120064|14120064 3R - 14119295 14119329 3'utr Abi FlyBase G50912.1 AATACAAGTACACATACGCTCTATATGGTAAAAAT 24 14119315 0.90643634 3 23 137 0.888888889 1.380211242 0 0.083333333 0.185185185 24 3 0 24 3R:14119295-14119329 6 Abi FBtr0307077|FBtr0307076|FBtr0082910|FBtr0337097|FBtr0112896|FBtr0337096 14119260|14119260|14119260|14119260|14119260|14119260 14120064|14120064|14120064|14120064|14120064|14120064 TACGCT 6mer3-8 dme-miR-965-3p 3R - 14119294 14119350 3'utr Abi FlyBase G38486.1 AGGAATCAAATTAAATTAAACAATACAAGTACACATACGCTCTATATGGTAAAAATA 16 14119315 0.95948439 5 14 73 0.928571429 1.414973348 0.071428571 0.4375 0.678571429 16 2 0 26 3R:14119294-14119350 6 19 2657 FBgn0020510 1356.63 69.31 106.3 0.014005293 0.274130717 0.178739417 0 0 0 0.15 dme-miR-283-5p 6mer3-8 TGATAT 3R 14119533 14119538 - 3R_14119533_14119538_- 0.999006106 0.999991725 0.999498916 0.000696924 Abi FBtr0112896|FBtr0337096|FBtr0082910|FBtr0337097|FBtr0307077|FBtr0307076 14119260|14119260|14119260|14119260|14119260|14119260 14120064|14120064|14120064|14120064|14120064|14120064 3R - 14119486 14119587 3'utr Abi FlyBase G50913.2 AAATATTTGCTCACAGTTTTATCAAGCGATTTCTGTTTGCCTTGCGCTTTGATATGCCCGGCTATTATACACCAATACTACCCGAACCTATGCCCCCAGCAA 33 14119533 0.939595014 10 30 221 0.897435897 1.06694679 0.230769231 0.181818182 0.307692308 33 2 2 35 3R:14119486-14119587 6 Abi FBtr0307077|FBtr0307076|FBtr0082910|FBtr0337097|FBtr0112896|FBtr0337096 14119260|14119260|14119260|14119260|14119260|14119260 14120064|14120064|14120064|14120064|14120064|14120064 TGATAT 6mer3-8 dme-miR-283-5p 3R - 14119458 14119556 3'utr Abi FlyBase G38487.1 TCTGTTTGCCTTGCGCTTTGATATGCCCGGCTATTATACACCAATACTACCCGAACCTATGCCCCCAGCAATACTGTAGGTTATATAAATTTCAGTTAG 11 14119533 0.988293534 7 10 89 0.933333333 1.146128036 0.2 0.363636364 0.533333333 11 1 0 14 3R:14119458-14119556 6 14 2658 FBgn0020510 1356.63 69.31 106.3 0.010319689 0.201991055 0.131702728 -5 -5 -5 0.15 dme-miR-1006-3p 6mer3-8 CGAATT 3R 14119621 14119626 - 3R_14119621_14119626_- 0.986395837 0.970137026 0.978266431 0.011496708 Abi FBtr0112896|FBtr0337096|FBtr0082910|FBtr0337097|FBtr0307077|FBtr0307076 14119260|14119260|14119260|14119260|14119260|14119260 14120064|14120064|14120064|14120064|14120064|14120064 3R - 14119588 14119716 3'utr Abi FlyBase G50914.1 GTAGCCGAAAACGATGCAAGAAGGGGAAAGTGAAACCGGATACCCGTGAATAACTTATGCGATATTATAAAACTGTTCCACAACCGTAGACGAATTCTGTCCTGCTCCTGCCGCCAATCCAAATACTTT 28 14119622 0.97150218 12 26 154 0.965517241 1.447158031 0.413793103 0.035714286 0.068965517 28 1 0 28 3R:14119588-14119716 6 Abi FBtr0307077|FBtr0307076|FBtr0082910|FBtr0337097|FBtr0112896|FBtr0337096 14119260|14119260|14119260|14119260|14119260|14119260 14120064|14120064|14120064|14120064|14120064|14120064 CGAATT 6mer3-8 dme-miR-1006-3p 3R - 14119601 14119699 3'utr Abi FlyBase G38488.1 AAGAAGGGGAAAGTGAAACCGGATACCCGTGAATAACTTATGCGATATTATAAAACTGTTCCACAACCGTAGACGAATTCTGTCCTGCTCCTGCCGCCA 26 14119622 0.964732498 11 24 150 0.897435897 1.544068044 0.41025641 0.384615385 0.58974359 26 4 0 35 3R:14119601-14119699 6 9 2659 FBgn0020510 1356.63 69.31 106.3 0.006634086 0.129851392 0.08466604 -4 -4 -4 0.15 dme-miR-970-3p 6mer2-7 CTTATG 3R 14119658 14119663 - 3R_14119658_14119663_- 0.771049557 0.383499588 0.577274573 0.274039233 Abi FBtr0112896|FBtr0337096|FBtr0082910|FBtr0337097|FBtr0307077|FBtr0307076 14119260|14119260|14119260|14119260|14119260|14119260 14120064|14120064|14120064|14120064|14120064|14120064 3R - 14119588 14119716 3'utr Abi FlyBase G50914.1 GTAGCCGAAAACGATGCAAGAAGGGGAAAGTGAAACCGGATACCCGTGAATAACTTATGCGATATTATAAAACTGTTCCACAACCGTAGACGAATTCTGTCCTGCTCCTGCCGCCAATCCAAATACTTT 28 14119661 0.97150218 12 26 154 0.965517241 1.447158031 0.413793103 0.035714286 0.068965517 28 1 0 28 3R:14119588-14119716 6 Abi FBtr0307077|FBtr0307076|FBtr0082910|FBtr0337097|FBtr0112896|FBtr0337096 14119260|14119260|14119260|14119260|14119260|14119260 14120064|14120064|14120064|14120064|14120064|14120064 CTTATG 6mer2-7 dme-miR-970-3p 3R - 14119601 14119699 3'utr Abi FlyBase G38488.1 AAGAAGGGGAAAGTGAAACCGGATACCCGTGAATAACTTATGCGATATTATAAAACTGTTCCACAACCGTAGACGAATTCTGTCCTGCTCCTGCCGCCA 26 14119676 0.964732498 11 24 150 0.897435897 1.544068044 0.41025641 0.384615385 0.58974359 26 4 0 35 3R:14119601-14119699 6 9.5 2660 FBgn0020510 1356.63 69.31 106.3 0.007002646 0.137065359 0.089369708 -2 13 5.5 0.15 dme-miR-14-3p 7mer-A1 AGACTGA 3R 14119938 14119944 - 3R_14119938_14119944_- 0.743516478 0.820728723 0.7821226 0.05459727 Abi FBtr0112896|FBtr0337096|FBtr0082910|FBtr0337097|FBtr0307077|FBtr0307076 14119260|14119260|14119260|14119260|14119260|14119260 14120064|14120064|14120064|14120064|14120064|14120064 3R - 14119916 14119980 3'utr Abi FlyBase G50915.2 AGCTCCAAAAAATTTCAATTCAGTTATCGGAGAGTTAGACTGAGGACCGCAACAGACTCAGCTGA 39 14119946 0.814789467 5 37 169 0.958333333 1.662757832 0.125 0.230769231 0.375 39 2 0 46 3R:14119916-14119980 7 Abi FBtr0307077|FBtr0307076|FBtr0082910|FBtr0337097|FBtr0112896|FBtr0337096 14119260|14119260|14119260|14119260|14119260|14119260 14120064|14120064|14120064|14120064|14120064|14120064 AGACTGA 7mer-A1 dme-miR-14-3p 3R - 14119872 14119962 3'utr Abi FlyBase G38489.1 TTCAGTTATCGGAGAGTTAGACTGAGGACCGCAACAGACTCAGCTGACAATGACGATAAGATTTTGAGCATATTAATAAGGACAATTATAC 22 14119946 0.963587089 8 18 95 0.806451613 0.920818754 0.290322581 0.272727273 0.483870968 22 4 2 25 3R:14119872-14119962 7 27.5 2661 FBgn0020510 1356.63 69.31 106.3 0.020270818 0.396768143 0.258701787 2 2 2 0.15 dme-miR-2b-2-5p 7mer-m8 TTGAAGA 3R 14235033 14235039 - 3R_14235033_14235039_- 0.621129566 0.627196169 0.624162867 0.004289734 CG43291 FBtr0347150 14234982 14236679 3R - 14234881 14235071 3'utr CG43291 FlyBase G50928.1 AGGGGAGCCATAGCTGAAGCTGCACCCAGACTTTGAAGATACACTTGTAGAACGAGTGGTTACACCACCAAGATGGAGTATTTAAGTTAAAAACTTTAAGGATGTCACAACATGTATAGATTTAAGTGTATGTTTGCAAGGAAAAATGCCATAATATGTAAGGGAAAAAGTTATAGTTCCTTTAAAATTCT 32 14235038 0.97276967 14 31 185 0.96969697 1.204119983 0.272727273 0.03125 0.060606061 32 0 1 32 3R:14234881-14235071 7 CG43291 FBtr0347150 14234982 14236679 TTGAAGA 7mer-m8 dme-miR-2b-2-5p 3R - 14234965 14235060 3'utr CG43291 FlyBase G38496.1 AGCTGAAGCTGCACCCAGACTTTGAAGATACACTTGTAGAACGAGTGGTTACACCACCAAGATGGAGTATTTAAGTTAAAAACTTTAAGGATGTCA 18 14235038 0.93381821 5 18 72 1 1.462397998 0.206896552 0.444444444 0.655172414 18 0 0 29 3R:14234965-14235060 7 15 2662 FBgn0262983 11.66666667 1.006666667 1.546666667 1.285714286 14.90066225 9.698275862 -1 -1 -1 0.15 dme-miR-11-3p 7mer-m1 TGTGATG 3R 14235886 14235892 - 3R_14235886_14235892_- 0.605625633 0.606175182 0.605900407 0.000388626 CG43291 FBtr0347150 14234982 14236679 3R - 14235814 14235981 3'utr CG43291 FlyBase G50931.1 AGAAAGCACTCAAGGACCTGTGGGGCGGAATGAATGCAGCACTCAAAAGGAGGAGGACTCGGGTTACGTCGATTCAAGTAACCGAAGATTGTGATGGTGTCATGAATTTATGGTGCAGGGATATTAAAATGTCCCTCATCCTGAAAACTGGTTTACATTTGACCTATA 179 14235893 0.961521296 16 169 1039 0.948598131 1.353253528 0.186915888 0.173184358 0.308411215 179 3 8 203 3R:14235814-14235981 7 CG43291 FBtr0347150 14234982 14236679 TGTGATG 7mer-m1 dme-miR-11-3p 3R - 14235821 14236111 3'utr CG43291 FlyBase G38498.1 GAATCAACGATACTTGCAATTTCCGTGTCGAATCTTTATGCGAATGCATCTCGGAATGCTGGAGATGAATCTGGACCTGGTAACGGAGCCGAAGGAGGATGACAGCGACAGCGGATGCGGGAGCTTACCCAGAAAGCACTCAAGGACCTGTGGGGCGGAATGAATGCAGCACTCAAAAGGAGGAGGACTCGGGTTACGTCGATTCAAGTAACCGAAGATTGTGATGGTGTCATGAATTTATGGTGCAGGGATATTAAAATGTCCCTCATCCTGAAAACTGGTTTACATTTG 153 14235893 0.969897876 19 150 851 0.983122363 1.668385917 0.168776371 0.418300654 0.624472574 153 0 4 233 3R:14235821-14236111 7 141.5 2663 FBgn0262983 11.66666667 1.006666667 1.546666667 12.12857143 140.5629139 91.48706897 1 1 1 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 14256901 14256907 + 3R_14256901_14256907_+ 0.637379257 0.628512963 0.63294611 0.006269421 CG43179 FBtr0306052 14256732 14256930 3R + 14256885 14256942 3'utr CG43179 FlyBase G42746.1 ATTCAGGCGTTCTTATGGCAGCTTTAAAAAAGCCATAATGACGGTTAAGGTCTCTGCA 14 14256900 0.981767122 4 14 100 1 1.204119983 0 0.142857143 0.25 14 0 0 16 3R:14256885-14256942 7 CG43179 FBtr0306052 14256732 14256930 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 14256886 14256913 3'utr CG43179 FlyBase G32298.1 TTCAGGCGTTCTTATGGCAGCTTTAAAA 6 14256900 0.726681212 3 5 43 0.833333333 0.698970004 0 0 0 6 1 0 5 3R:14256886-14256913 7 9 2664 FBgn0262808 15 2.723333333 4.116666667 0.6 3.304773562 2.186234818 1 1 1 0.15 dme-miR-980-3p 6mer3-8 GGCAGC 3R 14263455 14263460 - 3R_14263455_14263460_- 0.999846882 0.999986536 0.999916709 9.87E-05 trx FBtr0082950|FBtr0082948|FBtr0082947|FBtr0082949 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 3R - 14263435 14263514 3'utr trx FlyBase G50948.2 TCCTATCGGGGCGATCGGTCAGACTTGTACAGGCAAAGTTCCATAGCATTTTTTGGCAGCCATTCAAGACGCGCGCACTT 62 14263461 0.781601175 9 51 404 0.826086957 1.278753601 0.086956522 0.096774194 0.188405797 62 10 2 57 3R:14263435-14263514 6 trx FBtr0082947|FBtr0082949|FBtr0082950|FBtr0082948 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 14263436 14263520 3'utr trx FlyBase G38508.1 GTATATTCCTATCGGGGCGATCGGTCAGACTTGTACAGGCAAAGTTCCATAGCATTTTTTGGCAGCCATTCAAGACGCGCGCACT 30 14263461 0.983629459 9 24 197 0.76744186 1.041392685 0.093023256 0.366666667 0.558139535 30 8 2 33 3R:14263436-14263520 6 36 2665 FBgn0003862 1984.743333 17.36 26.62333333 0.018138365 2.073732719 1.352197321 1 1 1 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 3R 14264069 14264074 - 3R_14264069_14264074_- 0.99974375 0.999036641 0.999390195 0.000499995 trx FBtr0082950|FBtr0082948|FBtr0082947|FBtr0082949 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 3R - 14264058 14264091 3'utr trx FlyBase G50952.1 AATTACTTACAGGGGCTTGTGTTAGATTGTACAT 6 14264073 0.686116203 5 6 50 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 3R:14264058-14264091 6 trx FBtr0082947|FBtr0082949|FBtr0082950|FBtr0082948 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 14264053 14264089 3'utr trx FlyBase G38513.1 TTACTTACAGGGGCTTGTGTTAGATTGTACATATATT 11 14264073 0.687467593 4 9 97 0.894736842 0.929418926 0 0.363636364 0.631578947 11 1 1 17 3R:14264053-14264089 6 8.5 2666 FBgn0003862 1984.743333 17.36 26.62333333 0.00428267 0.489631336 0.319268812 -1 -1 -1 0.15 dme-miR-8-3p 7mer-m8 CAGTATT 3R 14264299 14264305 - 3R_14264299_14264305_- 0.642943432 0.642881272 0.642912352 4.39E-05 trx FBtr0082950|FBtr0082948|FBtr0082947|FBtr0082949 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 3R - 14264280 14264328 3'utr trx FlyBase G50955.1 AAAGAACAGAAACTCGATGACGTCAGTATTCAAGGGGAGATAATTAATA 164 14264306 0.845182834 6 156 814 0.95959596 1.977723605 0.580808081 0.164634146 0.308080808 164 7 1 190 3R:14264280-14264328 7 trx FBtr0082947|FBtr0082949|FBtr0082950|FBtr0082948 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 CAGTATT 7mer-m8 dme-miR-8-3p 3R - 14264283 14264348 3'utr trx FlyBase G38514.1 ATATCCGAGCGATCGGAGTGAAAGAACAGAAACTCGATGACGTCAGTATTCAAGGGGAGATAATTA 98 14264306 0.835554401 7 94 460 0.973856209 2.173186268 0.424836601 0.448979592 0.647058824 98 4 0 149 3R:14264283-14264348 7 129.5 2667 FBgn0003862 1984.743333 17.36 26.62333333 0.065247731 7.459677419 4.864154251 1 1 1 0.15 dme-miR-999-3p 7mer-m8 AGTTAAC 3R 14264501 14264507 - 3R_14264501_14264507_- 0.537964063 0.674463791 0.606213927 0.096519863 trx FBtr0082950|FBtr0082948|FBtr0082947|FBtr0082949 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 3R - 14264392 14264580 3'utr trx FlyBase G50956.1 CATTGCAAAAACTAATTGCTGCCCACAATGGGGGCAGAAAAAACTCACCTGGAATGAGAATTGAAACACTTGTAGTTAACGGTTATATCGATCTATGTTTGGTCAATCGTGATACTTTTCGTTTTACAACCCCCATACGTCTTAAGTAGTTGATATGTAAAAGTTAAACAGTTGATATTATTATATATC 36 14264478 0.988906463 22 32 294 0.888888889 1.602059991 0.2 0.25 0.4 36 5 0 40 3R:14264392-14264580 7 trx FBtr0082947|FBtr0082949|FBtr0082950|FBtr0082948 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 AGTTAAC 7mer-m8 dme-miR-999-3p 3R - 14264396 14264530 3'utr trx FlyBase G38515.1 GGAATGAGAATTGAAACACTTGTAGTTAACGGTTATATCGATCTATGTTTGGTCAATCGTGATACTTTTCGTTTTACAACCCCCATACGTCTTAAGTAGTTGATATGTAAAAGTTAAACAGTTGATATTATTATA 27 14264480 0.988483977 17 25 223 0.916666667 1.041392685 0.416666667 0.259259259 0.444444444 27 1 2 33 3R:14264396-14264530 7 7 2668 FBgn0003862 1984.743333 17.36 26.62333333 0.003526904 0.403225806 0.262927257 -29 -27 -28 0.15 dme-miR-184-5p 7mer-A1 GATAAGA 3R 14264905 14264911 - 3R_14264905_14264911_- 0.759198337 0.726141984 0.742670161 0.023374334 trx FBtr0082950|FBtr0082948|FBtr0082947|FBtr0082949 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 3R - 14264881 14264968 stop_codon trx FlyBase G50957.1 GCGGTTCGAAAAGGTGTCGGAAGTACTTAAATTAATAAAAGGAAGATCAGTGTCAGAGATAAGAACTAAGTATGACGCTGGGCGTCGA 17 14264909 0.949387951 6 16 77 1 1.255272505 0.277777778 0.058823529 0.111111111 17 0 0 18 3R:14264881-14264968 7 trx FBtr0082947|FBtr0082949|FBtr0082950|FBtr0082948|FBtr0100277 14263356|14263356|14263356|14263356|14264656 14264933|14264933|14264933|14264933|14264933 GATAAGA 7mer-A1 dme-miR-184-5p 3R - 14264877 14264920 3'utr trx FlyBase G38516.1 AGTGTCAGAGATAAGAACTAAGTATGACGCTGGGCGTCGAAATT 7 14264909 0.957099222 3 6 28 1 1.113943352 0.076923077 0.285714286 0.615384615 7 0 0 13 3R:14264877-14264920 7 9 2669 FBgn0003862 1984.743333 17.36 26.62333333 0.004534591 0.51843318 0.33804933 -2 -2 -2 0.15 dme-miR-988-3p 6mer3-8 ACAAGG 3R 14301757 14301762 + 3R_14301757_14301762_+ 0.798621023 0.999916096 0.89926856 0.14233713 CG12207 FBtr0309999|FBtr0309998|FBtr0082922|FBtr0344157|FBtr0082923|FBtr0309997|FBtr0082921 14301482|14301482|14301482|14301482|14301482|14301482|14301482 14302276|14302276|14302276|14302276|14302276|14302276|14302276 3R + 14301541 14301977 3'utr CG12207 FlyBase G42756.1 GTTTTTAATTGCCGCGCATTGGGGAGATGACTTTGGTCAGCATGTTACATCACACGGAAATGCCGCACTCTAAATGTAATATAAATAATGATATCTATCGACAAATATGCGCGATACCTTACCTATACGATAAAACATTAATGTAACTGAGCTAAAACCTAAACTAAACTATATACCTAAACTAAGCGCTGCGCTATGTAAACCTGTAGTACGATGACAAGGCAGTTCTGTAAACCCATTTTGATCTTGTGTCAGCCCTGTATAATTGCCGCCAATTTGCTTGCAAGATCCGATCTGAACCGCATCGAACAGATACGGAAGCCTTCTGTCCTCCTGTCCGCCCTCCTGCCCCCCATTATGTTTACTTTTTGTATGACTCTAGCTTTAATCACACTGTGTATAATTTAGTTATGAGAATTATTAATGTTAATTGTATA 1203 14301739 0.903712093 88 1101 7837 0.921708185 1.936178509 0.161565836 0.147963425 0.270462633 1203 96 14 1295 3R:14301541-14301977 6 CG12207 FBtr0344157|FBtr0082922|FBtr0309998|FBtr0309999|FBtr0082921|FBtr0309997|FBtr0082923 14301482|14301482|14301482|14301482|14301482|14301482|14301482 14302276|14302276|14302276|14302276|14302276|14302276|14302276 ACAAGG 6mer3-8 dme-miR-988-3p 3R + 14301545 14302027 3'utr CG12207 FlyBase G32309.1 TTAATTGCCGCGCATTGGGGAGATGACTTTGGTCAGCATGTTACATCACACGGAAATGCCGCACTCTAAATGTAATATAAATAATGATATCTATCGACAAATATGCGCGATACCTTACCTATACGATAAAACATTAATGTAACTGAGCTAAAACCTAAACTAAACTATATACCTAAACTAAGCGCTGCGCTATGTAAACCTGTAGTACGATGACAAGGCAGTTCTGTAAACCCATTTTGATCTTGTGTCAGCCCTGTATAATTGCCGCCAATTTGCTTGCAAGATCCGATCTGAACCGCATCGAACAGATACGGAAGCCTTCTGTCCTCCTGTCCGCCCTCCTGCCCCCCATTATGTTTACTTTTTGTATGACTCTAGCTTTAATCACACTGTGTATAATTTAGTTATGAGAATTATTAATGTTAATTGTATATAGTCGCCAGAAAACACAACAATCCAACTGGACTGCTCTGACCGCTAAAA 864 14301738 0.898534561 83 773 5436 0.909836066 1.744292983 0.169150522 0.393518519 0.609538003 864 100 21 1221 3R:14301545-14302027 6 55 2670 FBgn0038220 244.6666667 14.73 22.60333333 0.22479564 3.733876443 2.433269429 18 19 18.5 0.15 dme-miR-932-5p 6mer2-7 GAATTG 3R 14302262 14302267 + 3R_14302262_14302267_+ 0.87722513 0.746660293 0.811942711 0.092323255 CG12207 FBtr0309999|FBtr0309998|FBtr0082922|FBtr0344157|FBtr0082923|FBtr0309997|FBtr0082921 14301482|14301482|14301482|14301482|14301482|14301482|14301482 14302276|14302276|14302276|14302276|14302276|14302276|14302276 3R + 14302196 14302277 3'utr CG12207 FlyBase G42758.1 TATCGAACTGCACTCATATCGAGCCAAGTCATGTTGTACGTGAGAATGTTTTTTAAAATAAAGTGAGAATTGTGTTGGAACA 17 14302266 0.980212426 11 15 107 0.88 1.342422681 0.32 0.294117647 0.52 17 3 0 22 3R:14302196-14302277 6 CG12207 FBtr0344157|FBtr0082922|FBtr0309998|FBtr0309999|FBtr0082921|FBtr0309997|FBtr0082923 14301482|14301482|14301482|14301482|14301482|14301482|14301482 14302276|14302276|14302276|14302276|14302276|14302276|14302276 GAATTG 6mer2-7 dme-miR-932-5p 3R + 14302225 14302278 3'utr CG12207 FlyBase G32312.1 CATGTTGTACGTGAGAATGTTTTTTAAAATAAAGTGAGAATTGTGTTGGAACAA 13 14302266 0.977309024 6 13 89 1 1.255272505 0 0.153846154 0.388888889 13 0 0 18 3R:14302225-14302278 6 9 2671 FBgn0038220 244.6666667 14.73 22.60333333 0.036784741 0.610997963 0.398171361 -4 -4 -4 0.15 dme-miR-34-5p 7mer-A1 ACTGCCA 3R 14319837 14319843 + 3R_14319837_14319843_+ 0.790961266 0.77789786 0.784429563 0.009237219 pr-set7 FBtr0082930 14318757 14320494 3R + 14319720 14319876 3'utr pr-set7 FlyBase G42774.1 AAGAGATGATGATGTTGATGAAGCCACGCATTCACATTGACAAGAATCGATTGTACACTATTTATATAGATATTTATATTAGATACATGTGTAATTTCTAACTATTACGTACTATTTACTGCCATAGAGCTATACACTCCCCCTCGCACCTGTCCCA 125 14319835 0.982639671 11 119 899 0.929032258 2.158362492 0.135483871 0.184 0.341935484 125 11 0 144 3R:14319720-14319876 7 pr-set7 FBtr0082930 14318757 14320494 ACTGCCA 7mer-A1 dme-miR-34-5p 3R + 14319806 14319864 3'utr pr-set7 FlyBase G32324.1 ATGTGTAATTTCTAACTATTACGTACTATTTACTGCCATAGAGCTATACACTCCCCCTC 56 14319835 0.983604819 7 50 391 0.94047619 1.420505837 0.202380952 0.375 0.583333333 56 3 2 79 3R:14319806-14319864 7 80.5 2672 FBgn0011474 544.8566667 15.96333333 24.49 0.147745279 5.042806431 3.287055941 2 2 2 0.15 dme-bantam-3p 7mer-m8 TGATCTC 3R 14320604 14320610 - 3R_14320604_14320610_- 0.463854145 0.438552641 0.451203393 0.017890862 Afti FBtr0310001 14320189 14321785 3R - 14320521 14320662 3'utr Afti FlyBase G51003.1 AGAAGAACTCCCATGCATTCCAAGTGTAAATGAGTGTGACTGGTTGCCATGATGATCTCCAGGTAATCGCTGGAAAACGAAACCCAATCCGCTCCAGTTCTTGATTATTGTTTTGTTCGTGTTAATGTGTTTTCATTTATTT 172 14320610 0.986334636 13 162 1176 0.947368421 1.77815125 0.336842105 0.093023256 0.178947368 172 8 2 180 3R:14320521-14320662 7 Afti FBtr0310001 14320189 14321785 TGATCTC 7mer-m8 dme-bantam-3p 3R - 14320525 14320635 3'utr Afti FlyBase G38537.1 AAATGAGTGTGACTGGTTGCCATGATGATCTCCAGGTAATCGCTGGAAAACGAAACCCAATCCGCTCCAGTTCTTGATTATTGTTTTGTTCGTGTTAATGTGTTTTCATTT 117 14320610 0.992688842 13 113 743 0.950819672 2.240549248 0.273224044 0.41025641 0.62295082 117 9 0 174 3R:14320525-14320635 7 108.5 2673 FBgn0038223 625.08 17.01666667 26.15666667 0.173577782 6.376101861 4.14808207 0 0 0 0.15 dme-miR-8-3p 8mer-A1 CAGTATTA 3R 14321636 14321643 - 3R_14321636_14321643_- 0.670622287 0.669252883 0.669937585 0.000968312 Afti FBtr0310001|FBtr0310000|FBtr0273391 14320189|14321075|14321377 14321785|14321785|14321785 3R - 14321469 14321680 3'utr Afti FlyBase G51009.1 TAGGCGAAAGGATCGATCGCGCACCCGGGTAGCCAGTCAGTATTATGAATCCGTCTGATATTCACCATAATCCGAACCGTCACACATTGTAGTTTTGAGGCAAGCTGTGTTCCATGTTGTTGTCGTTGTTGTTAACCTTGTCGTTGGCATAATTGTTGTTGTTGTTGTGCATGCATGTTGTAGTCTTAGGCGTAAAAATCAGGATTTAGAAC 207 14321644 0.93296828 36 192 1460 0.923076923 1.755874856 0.295546559 0.169082126 0.303643725 207 16 3 228 3R:14321469-14321680 8 Afti FBtr0310001|FBtr0310000|FBtr0273391 14320189|14321075|14321377 14321785|14321785|14321785 CAGTATTA 8mer-A1 dme-miR-8-3p 3R - 14321483 14321678 3'utr Afti FlyBase G38542.1 GGCGAAAGGATCGATCGCGCACCCGGGTAGCCAGTCAGTATTATGAATCCGTCTGATATTCACCATAATCCGAACCGTCACACATTGTAGTTTTGAGGCAAGCTGTGTTCCATGTTGTTGTCGTTGTTGTTAACCTTGTCGTTGGCATAATTGTTGTTGTTGTTGTGCATGCATGTTGTAGTCTTAGGCGTAAAAA 124 14321644 0.981708501 25 108 858 0.882926829 2.257678575 0.27804878 0.411290323 0.643902439 124 24 0 181 3R:14321483-14321678 8 70 2674 FBgn0038223 625.08 17.01666667 26.15666667 0.111985666 4.113614104 2.67618198 1 1 1 0.15 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 14327697 14327702 + 3R_14327697_14327702_+ 0.999084137 0.999782043 0.99943309 0.00049349 CG3321 FBtr0082931|FBtr0082932|FBtr0303795 14327535|14327535|14327535 14327735|14327735|14327735 3R + 14327671 14327724 3'utr CG3321 FlyBase G42778.1 CGTTTTTGTGTTTTCCTCTGATGCTTGTGCAAAAAACAGAATGTTCGAAATTAA 15 14327693 0.989141134 6 14 129 0.894736842 1.230448921 0.315789474 0.266666667 0.421052632 15 2 0 17 3R:14327671-14327724 6 CG3321 FBtr0303795|FBtr0082931|FBtr0082932 14327535|14327535|14327535 14327735|14327735|14327735 GTGCAA 6mer3-8 dme-miR-92b-3p 3R + 14327668 14327705 3'utr CG3321 FlyBase G32325.1 TATCGTTTTTGTGTTTTCCTCTGATGCTTGTGCAAAAA 5 14327692 0.984175576 4 5 41 1 0.903089987 0 0.6 0.75 5 0 0 8 3R:14327668-14327705 6 8 2675 FBgn0038224 1345.333333 334.8866667 513.9866667 0.005946482 0.023888679 0.015564606 4 5 4.5 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 3R 14329789 14329795 - 3R_14329789_14329795_- 0.781784749 0.781756387 0.781770568 2.00E-05 NK7.1 FBtr0306742 14329411 14330223 3R - 14329783 14329810 3'utr NK7.1 FlyBase G51024.1 ATTTATTGAGTGTTTGTACAAAAAAGGA 32 14329797 0.60890308 3 31 164 0.977272727 1.33243846 0.363636364 0.28125 0.477272727 32 0 1 43 3R:14329783-14329810 7 NK7.1 FBtr0306742 14329411 14330223 GTACAAA 7mer-A1 dme-miR-305-5p 3R - 14329782 14329810 3'utr NK7.1 FlyBase G38550.1 ATTTATTGAGTGTTTGTACAAAAAAGGAA 11 14329797 0.931052901 2 10 61 0.857142857 1.079181246 0.214285714 0.272727273 0.428571429 11 2 0 12 3R:14329782-14329810 7 21.5 2676 FBgn0024321 1080.813333 40.77666667 62.79666667 0.019892427 0.527262323 0.342374861 2 2 2 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 14329921 14329927 - 3R_14329921_14329927_- 0.751362746 0.751163169 0.751262957 0.000141068 NK7.1 FBtr0306742|FBtr0306742|FBtr0306742 14329411|14329411|14329411 14330223|14330223|14330223 3R - 14329816 14329964 3'utr NK7.1 FlyBase G51025.1 CTATGGCAAATTGTAATCTGAACTTTTGAGAATTTCATGTGATAATGTATACGAGGCGATTACAAAATTGATTTTACTACTTGAACTATGAACTATACTATGTATGTAGGCCTGTAAGCTCTGCTACCCTGTAAATTGCAATTGAATGA 50 14329931 0.985662963 17 44 364 0.911764706 1.491361694 0.588235294 0.22 0.426470588 50 5 1 62 3R:14329816-14329964 7 NK7.1 FBtr0306742|FBtr0306742|FBtr0306742 14329411|14329411|14329411 14330223|14330223|14330223 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 14329885 14329962 3'utr NK7.1 FlyBase G38552.1 ATGGCAAATTGTAATCTGAACTTTTGAGAATTTCATGTGATAATGTATACGAGGCGATTACAAAATTGATTTTACTAC 46 14329931 0.988247724 10 38 348 0.825396825 0.937852093 0.492063492 0.304347826 0.492063492 46 6 5 52 3R:14329885-14329962 7 36 2677 FBgn0024321 1080.813333 40.77666667 62.79666667 0.033308249 0.882857844 0.573278836 4 4 4 0.15 dme-miR-263a-5p 6mer3-8 GTGCCA 3R 14330190 14330195 - 3R_14330190_14330195_- 0.954992049 0.943454023 0.949223036 0.008158598 NK7.1 FBtr0306742|FBtr0082941|FBtr0082942|FBtr0347151 14329411|14330138|14330138|14330138 14330223|14330223|14330223|14330223 3R - 14330161 14330212 3'utr NK7.1 FlyBase G51028.1 CACAGTCAAATTAACTTGTGCCAAAAAGTCGAATATTGCTCATCCACAAAGA 12 14330194 0.964303215 3 12 62 1 1.230448921 0 0.333333333 0.529411765 12 0 0 17 3R:14330161-14330212 6 NK7.1 FBtr0347151|FBtr0082942|FBtr0082941|FBtr0306742 14330138|14330138|14330138|14329411 14330223|14330223|14330223|14330223 GTGCCA 6mer3-8 dme-miR-263a-5p 3R - 14330175 14330205 3'utr NK7.1 FlyBase G38554.1 AAATTAACTTGTGCCAAAAAGTCGAATATTG 7 14330195 0.757781504 3 6 33 0.888888889 0.903089987 0 0.142857143 0.333333333 7 1 0 8 3R:14330175-14330205 6 8.5 2678 FBgn0024321 1080.813333 40.77666667 62.79666667 0.007864448 0.208452546 0.135357503 -1 0 -0.5 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 3R 14358544 14358549 - 3R_14358544_14358549_- 0.99908597 0.999287806 0.999186888 0.000142694 CG31320 FBtr0082943 14358354 14358599 3R - 14358537 14358570 5'utr CG31320 FlyBase G51039.1 ATTAGATTTATTTTACCAATTTGTGTTGCAAATT 12 14358550 0.783606642 3 11 143 0.923076923 1.079181246 0 0.083333333 0.153846154 12 1 0 12 3R:14358537-14358570 6 CG31320 FBtr0082943 14358354 14358599 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 14358532 14358566 5'utr CG31320 FlyBase G38560.1 GATTTATTTTACCAATTTGTGTTGCAAATTAAGCT 6 14358549 0.747476916 2 6 62 1 0.954242509 0.222222222 0.5 0.666666667 6 0 0 9 3R:14358532-14358566 6 9 2679 FBgn0051320 281 9.873333333 15.10666667 0.03202847 0.911546253 0.59576346 1 0 0.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 3R 14392067 14392073 - 3R_14392067_14392073_- 0.636426831 0.816249084 0.726337958 0.127153568 cv-c FBtr0112631|FBtr0112630|FBtr0112632 14391681|14391681|14391681 14392774|14392774|14392774 3R - 14392047 14392128 3'utr cv-c FlyBase G51047.2 TTGTCAGCAGATATTGATTGATTTGGCTTCAGATGTTGTTTGATTGACGCCGCATTACCTGAACATGTATCTGTTAATAAAC 132 14392074 0.958976686 14 118 691 0.909090909 1.124938737 0.289772727 0.234848485 0.426136364 132 5 11 160 3R:14392047-14392128 7 cv-c FBtr0112631|FBtr0112630|FBtr0112632 14391681|14391681|14391681 14392774|14392774|14392774 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R - 14392051 14392132 3'utr cv-c FlyBase G38564.2 AGTTTTGTCAGCAGATATTGATTGATTTGGCTTCAGATGTTGTTTGATTGACGCCGCATTACCTGAACATGTATCTGTTAAT 99 14392074 0.977428418 9 89 496 0.865384615 0.984205733 0.243589744 0.383838384 0.608974359 99 8 13 135 3R:14392051-14392132 7 105.5 2680 FBgn0086901 1575.736667 21.11333333 32.53666667 0.066952811 4.996842438 3.242495646 1 1 1 0.15 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3R 14619499 14619505 - 3R_14619499_14619505_- 0.616875746 0.617277849 0.617076797 0.000284328 put FBtr0334030 14619028 14621033 3R - 14619482 14619523 3'utr put FlyBase G51116.1 AATTTGTATATTTTCCATTGGTGCTGAAACATCATTACGACG 36 14619506 0.779326452 2 35 298 0.976744186 1.62324929 0.023255814 0.166666667 0.302325581 36 1 0 42 3R:14619482-14619523 7 put FBtr0334030 14619028 14621033 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3R - 14619488 14619527 3'utr put FlyBase G38611.1 ATTTAATTTGTATATTTTCCATTGGTGCTGAAACATCATT 24 14619506 0.78849297 2 24 213 1 1.531478917 0.029411765 0.333333333 0.529411765 24 0 0 34 3R:14619488-14619527 7 30 2681 FBgn0003169 711.0033333 31.18333333 47.85 0.042193895 0.962052378 0.626959248 1 1 1 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 3R 14620629 14620634 - 3R_14620629_14620634_- 0.979148491 0.981873648 0.980511069 0.001926937 put FBtr0330227|FBtr0082977|FBtr0334030 14620328|14620328|14619028 14621021|14621033|14621033 3R - 14620602 14620700 3'utr put FlyBase G51120.1 AACTTTGAACAAAGAGCATTAGCTATGTCCAGAGACGTGGTAGTTGCTAATCCGACATTGACTTCATTGACTGATAACCATATATAGTTCTATATAAAT 669 14620634 0.717071033 20 623 5039 0.933174224 1.570987458 0.087112172 0.191330344 0.354415274 669 36 20 782 3R:14620602-14620700 6 put FBtr0334030|FBtr0330227|FBtr0082977 14619028|14620328|14620328 14621033|14621021|14621033 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 14620451 14620686 3'utr put FlyBase G38612.1 AGCATTAGCTATGTCCAGAGACGTGGTAGTTGCTAATCCGACATTGACTTCATTGACTGATAACCATATATAGTTCTATATAAATCATACATATAACGTACAATTTGTTTTGCCCTCTGGCAGTAGCCTGTGTGCATATGTAAACTGTTGAAAATTATCGTCAAGCCTTTTAAAGTATAATTTTATTTGTACGTTATCGAATGTCTTCATATAGTAGTAGTTTTATATTTAAAGTT 551 14620634 0.826500775 27 505 4201 0.921857305 1.419262711 0.07587769 0.406533575 0.629671574 551 39 30 814 3R:14620451-14620686 6 573 2682 FBgn0003169 711.0033333 31.18333333 47.85 0.805903395 18.37520043 11.97492163 0 0 0 0.15 dme-miR-980-3p 7mer-A1 GCAGCTA 3R 14620882 14620888 - 3R_14620882_14620888_- 0.823349086 0.823349562 0.823349324 3.54E-07 put FBtr0330227|FBtr0082977|FBtr0334030 14620328|14620328|14619028 14621021|14621033|14621033 3R - 14620860 14621005 3'utr put FlyBase G51122.1 CGGATCTGTGGCTCTGCAAAAAAATCAGTTGAAGCTTTTTGCTTCGTAGTGGATAGTTGATCGTCGAGGTCGTAAGACGTTTCGTTTTTAGTTTAATAGTTTGTAGTACCATTATAAGCAGCTATAGAATGGGTTGATTTATACGA 84 14620881 0.972997113 21 71 721 0.862745098 1.467361417 0.176470588 0.178571429 0.323529412 84 12 2 88 3R:14620860-14621005 7 put FBtr0334030|FBtr0330227|FBtr0082977 14619028|14620328|14620328 14621033|14621021|14621033 GCAGCTA 7mer-A1 dme-miR-980-3p 3R - 14620862 14620916 3'utr put FlyBase G38614.1 AGTTTAATAGTTTGTAGTACCATTATAAGCAGCTATAGAATGGGTTGATTTATAC 38 14620892 0.794423129 12 30 352 0.777777778 1.322219295 0.018518519 0.342105263 0.537037037 38 11 1 42 3R:14620862-14620916 7 43.5 2683 FBgn0003169 711.0033333 31.18333333 47.85 0.061181148 1.394975949 0.909090909 -7 4 -1.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 14642862 14642867 - 3R_14642862_14642867_- 0.899959534 0.874095705 0.887027619 0.018288468 l(3)L1231 FBtr0344158|FBtr0344158|FBtr0344158 14642670|14642670|14642670 14644934|14644934|14644934 3R - 14642836 14642890 3'utr l(3)L1231 FlyBase G51131.1 ATTTTGTAATTTACGTGCATTTTTGTGATCTAATTTGTGTAACTATTATAAACGA 674 14642868 0.652736499 18 646 7278 0.958041958 1.914871818 0.350815851 0.221068249 0.388111888 674 27 9 822 3R:14642836-14642890 6 l(3)L1231 FBtr0344158|FBtr0344158|FBtr0344158 14642670|14642670|14642670 14644934|14644934|14644934 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 14642807 14643189 3'utr l(3)L1231 FlyBase G38623.1 TATGAATTCGTTCTTGAGTTAGTTGATTACCGATTACCGGGTTCACTTGATTACCGATTGAGTTGGCCCGCACTTTACTCTGATCTACTTCGCTGTGCAAGTGACGCGAACAAAATTAATGTCCTTTTTGTAGCGAAACTACAAAACCATGTATTTGATTATATGCTTTAAACCCTATTTTTATAACACTTTAATTTGTAAGAACTGTAGCGATGAACCTACAACCCCGCATCCCTCCAGTAGCCGCCTCTTTTTCACCATTTGAAGTTTTGTCTGTTTTCGGTATGAGGTACAATTTCATTTTGTAATTTACGTGCATTTTTGTGATCTAATTTGTGTAACTATTATAAACGAAAAAAAAAAGAAATACAAAATACTTTAAG 663 14642868 0.990762597 60 621 6423 0.947013487 1.816462259 0.265895954 0.404223228 0.619460501 663 41 14 983 3R:14642807-14643189 6 567 2684 FBgn0086686 1443.953333 29.16666667 44.69666667 0.39267197 19.44 12.68550973 1 1 1 0.15 dme-miR-283-5p 6mer3-8 TGATAT 3R 14643255 14643260 - 3R_14643255_14643260_- 0.997545385 0.999997745 0.998771565 0.001734038 l(3)L1231 FBtr0344158 14642670 14644934 3R - 14643208 14643383 3'utr l(3)L1231 FlyBase G51133.1 ACGTTAATGCACCACCCATGGCACACTCAAACACTTGCATCTTTCATAGGAACTTTCGTTTGGGCATAGCGAAACGATAGAGCAGAAGGAACTACTTTAAAGATAATGGAACTCTGTAAAATATGATATATAATAATTCCCCCACACTCTCACTCTCTATCTCTAAAACCCTATAT 28 14643269 0.943638896 17 27 173 0.96875 1.491361694 0.125 0.107142857 0.21875 28 1 0 31 3R:14643208-14643383 6 l(3)L1231 FBtr0344158 14642670 14644934 TGATAT 6mer3-8 dme-miR-283-5p 3R - 14643207 14643331 3'utr l(3)L1231 FlyBase G38624.1 CTTTCGTTTGGGCATAGCGAAACGATAGAGCAGAAGGAACTACTTTAAAGATAATGGAACTCTGTAAAATATGATATATAATAATTCCCCCACACTCTCACTCTCTATCTCTAAAACCCTATATA 25 14643287 0.802808474 14 24 161 0.942857143 1.51851394 0.085714286 0.36 0.542857143 25 2 0 33 3R:14643207-14643331 6 4 2685 FBgn0086686 1443.953333 29.16666667 44.69666667 0.002770173 0.137142857 0.089492132 9 27 18 0.15 dme-miR-965-3p 7mer-m8 TACGCTT 3R 14643610 14643616 - 3R_14643610_14643616_- 0.617551289 0.618345517 0.617948403 0.000561584 l(3)L1231 FBtr0344158 14642670 14644934 3R - 14643557 14643656 3'utr l(3)L1231 FlyBase G51134.1 ATATTTATACAACAATACACAAAACAAGCAAGAAAACTGTTACGCTTTAAAATACGATATATACCGCTCACTGGAGACCGATCCCCAAATCACAGCCCTC 854 14643617 0.968733296 12 842 4678 0.986434109 2.229596528 0.076550388 0.162763466 0.307170543 854 9 5 1018 3R:14643557-14643656 7 l(3)L1231 FBtr0344158 14642670 14644934 TACGCTT 7mer-m8 dme-miR-965-3p 3R - 14643508 14643638 3'utr l(3)L1231 FlyBase G38625.1 ACAAAACAAGCAAGAAAACTGTTACGCTTTAAAATACGATATATACCGCTCACTGGAGACCGATCCCCAAATCACAGCCCTCAAGAAAACAAAACAAAAAAATTCACACCCAAACCATTCCATCTCCATCC 604 14643617 0.968729591 13 595 3317 0.982778416 2.330413773 0.09184845 0.324503311 0.531572905 604 12 3 856 3R:14643508-14643638 7 713 2686 FBgn0086686 1443.953333 29.16666667 44.69666667 0.493783271 24.44571429 15.95197256 1 1 1 0.15 dme-miR-988-3p 8mer-A1 ACAAGGGA 3R 14644095 14644102 - 3R_14644095_14644102_- 0.608424991 0.611075714 0.609750352 0.001874328 l(3)L1231 FBtr0344158 14642670 14644934 3R - 14644045 14644129 3'utr l(3)L1231 FlyBase G51138.1 AAACACCAACACACATACATACAACGTACAAGGGACTAGTTTGAAACCGCGAATCGTATTACTAAATATATATACAACTATATAT 330 14644103 0.925916552 13 301 1526 0.920716113 2.255272505 0.046035806 0.151515152 0.283887468 330 30 1 360 3R:14644045-14644129 8 l(3)L1231 FBtr0344158 14642670 14644934 ACAAGGGA 8mer-A1 dme-miR-988-3p 3R - 14644047 14644125 3'utr l(3)L1231 FlyBase G38630.1 ACCAACACACATACATACAACGTACAAGGGACTAGTTTGAAACCGCGAATCGTATTACTAAATATATATACAACTATAT 191 14644103 0.864646904 14 164 922 0.868327402 1.387389826 0.088967972 0.35078534 0.558718861 191 28 9 244 3R:14644047-14644125 8 225.5 2687 FBgn0086686 1443.953333 29.16666667 44.69666667 0.156168482 7.731428571 5.04511895 1 1 1 0.15 dme-miR-932-5p 6mer2-7 GAATTG 3R 14644229 14644234 - 3R_14644229_14644234_- 0.999986658 0.998297597 0.999142128 0.001194374 l(3)L1231 FBtr0344158 14642670 14644934 3R - 14644204 14644294 3'utr l(3)L1231 FlyBase G51140.1 TGTTTAAAAATTTTGTGAACGCATTTACAACAACAACCACAACACCATACACTCAAATGAGAATTGCAAGAACTACGAAAACAAAACAGGT 42 14644230 0.957889115 8 40 193 0.962264151 1.707570176 0.150943396 0.214285714 0.377358491 42 2 0 51 3R:14644204-14644294 6 l(3)L1231 FBtr0344158 14642670 14644934 GAATTG 6mer2-7 dme-miR-932-5p 3R - 14644212 14644293 3'utr l(3)L1231 FlyBase G38631.1 GTTTAAAAATTTTGTGAACGCATTTACAACAACAACCACAACACCATACACTCAAATGAGAATTGCAAGAACTACGAAAACA 14 14644230 0.96623267 5 13 74 0.916666667 1.342422681 0.208333333 0.642857143 0.791666667 14 2 0 22 3R:14644212-14644293 6 16 2688 FBgn0086686 1443.953333 29.16666667 44.69666667 0.011080691 0.548571429 0.357968529 -4 -4 -4 0.15 dme-miR-79-3p 7mer-A1 AGCTTTA 3R 14644451 14644457 - 3R_14644451_14644457_- 0.811829987 0.822865402 0.817347695 0.007803206 l(3)L1231 FBtr0344158 14642670 14644934 3R - 14644348 14644486 3'utr l(3)L1231 FlyBase G51141.1 AGTGAACCAACAAAAGGATTGTAGAGATCAGCTTTATTATACATATAAACGAGAAATTATAAAACAATACCAGAGCAAACAGATAAAATGAAACCGAAATTGTAGGAAATCTAGCAACAAATTTTGAATTCTGAATTAA 32 14644459 0.988820663 10 30 273 0.972222222 1.243038049 0.194444444 0.125 0.222222222 32 0 1 35 3R:14644348-14644486 7 l(3)L1231 FBtr0344158 14642670 14644934 AGCTTTA 7mer-A1 dme-miR-79-3p 3R - 14644437 14644476 3'utr l(3)L1231 FlyBase G38632.1 CAAAAGGATTGTAGAGATCAGCTTTATTATACATATAAAC 7 14644459 0.896624985 2 5 59 0.909090909 0.698970004 0 0.428571429 0.636363636 7 0 1 10 3R:14644437-14644476 7 14.5 2689 FBgn0086686 1443.953333 29.16666667 44.69666667 0.010041876 0.497142857 0.324408979 2 2 2 0.15 dme-miR-278-3p 6mer3-8 CCCACC 3R 14697842 14697847 - 3R_14697842_14697847_- 0.995559111 0.997750622 0.996654866 0.001549625 kibra FBtr0344383 14697687 14698883 3R - 14697713 14697881 3'utr kibra FlyBase G51202.1 TGTTTATGTTTTCACTAACCAGACCCAGCCTCTTCCCACCCCAAAATGTAGCAAGTAGTAGTATGAGTAGAATGAGAGTCGCCACACATATTTTTTCAATACCATAGTAATTTTAGTTGTAATAAATTATATGAAAGTGAACCTGTATATTGTAATTGTGCAATAAACA 30 14697849 0.975370804 14 27 167 0.951219512 1.591064607 0.073170732 0.2 0.414634146 30 2 0 39 3R:14697713-14697881 6 kibra FBtr0344383 14697687 14698883 CCCACC 6mer3-8 dme-miR-278-3p 3R - 14697816 14697868 3'utr kibra FlyBase G38686.1 ACTAACCAGACCCAGCCTCTTCCCACCCCAAAATGTAGCAAGTAGTAGTATGA 13 14697849 0.73934675 4 11 38 0.708333333 1.230448921 0 0.538461538 0.75 13 7 0 17 3R:14697816-14697868 6 11 2690 FBgn0262127 353.3166667 7.533333333 11.64333333 0.031133544 1.460176991 0.944746636 2 2 2 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 3R 14698004 14698009 - 3R_14698004_14698009_- 0.987345146 0.999892237 0.993618691 0.008872139 kibra FBtr0344383 14697687 14698883 3R - 14697978 14698076 3'utr kibra FlyBase G51204.1 CATAAAAGTGAGAGAAAATATAAAATTAAACCTTGTTATGCTTTCCCAAGCGGACCTGTTAAAACTGTTGACTTTGAAACTGTGCCGTGGTGCACTGAG 22 14698003 0.806828484 13 22 151 1 1.397940009 0.2 0.136363636 0.24 22 0 0 25 3R:14697978-14698076 6 kibra FBtr0344383 14697687 14698883 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 14697981 14698051 3'utr kibra FlyBase G38687.1 TTAAACCTTGTTATGCTTTCCCAAGCGGACCTGTTAAAACTGTTGACTTTGAAACTGTGCCGTGGTGCACT 16 14698009 0.983872482 8 15 117 0.961538462 1.397940009 0.153846154 0.375 0.615384615 16 1 0 25 3R:14697981-14698051 6 13.5 2691 FBgn0262127 353.3166667 7.533333333 11.64333333 0.038209349 1.792035398 1.159461781 -6 0 -3 0.15 dme-miR-980-3p 7mer-A1 GCAGCTA 3R 14698372 14698378 - 3R_14698372_14698378_- 0.823348653 0.823344793 0.823346723 2.76E-06 kibra FBtr0344383 14697687 14698883 3R - 14698300 14698514 3'utr kibra FlyBase G51207.1 AAAAACCAAGAAACAAGGAATATCAACACAATAACGCGCACATTGTGCGTTCAATGCCTTCAAATTCATATTGAAACCAACTGTATTCTTAAGACTTGAGCAAAAATTATACGAATGTTTATGAATATTTTTATACGCAGCTAGTTAGGATAGTTAACCCAAGCCACATATACACAAAACGTGAGGAGAACGTAAAATATTTATTATACTGATGG 73 14698383 0.99947005 30 68 537 0.938271605 1.880813592 0.160493827 0.109589041 0.197530864 73 5 0 76 3R:14698300-14698514 7 kibra FBtr0344383 14697687 14698883 GCAGCTA 7mer-A1 dme-miR-980-3p 3R - 14698205 14698473 3'utr kibra FlyBase G38689.1 ATTGTGCGTTCAATGCCTTCAAATTCATATTGAAACCAACTGTATTCTTAAGACTTGAGCAAAAATTATACGAATGTTTATGAATATTTTTATACGCAGCTAGTTAGGATAGTTAACCCAAGCCACATATACACAAAACGTGAGGAGAACGTAAAATATTTATTATACTGATGGATCGATCGACGTCGCGCTCGAATCCAGTCGTTTAGGTTAGTTAGCTTGCGTTTTTGTTAAGCTTAAAACGAATTCTTATACTGTAATTTTTTTTA 41 14698383 0.986053456 23 37 338 0.929824561 1.72427587 0.175438596 0.341463415 0.526315789 41 4 0 53 3R:14698205-14698473 7 23 2692 FBgn0262127 353.3166667 7.533333333 11.64333333 0.06509741 3.053097345 1.97537933 5 5 5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 14725087 14725092 - 3R_14725087_14725092_- 0.999235064 0.997435347 0.998335206 0.001272651 CG7530 FBtr0083021|FBtr0083020|FBtr0333277|FBtr0083019 14724758|14724758|14724758|14724758 14725158|14725158|14725158|14725158 3R - 14725030 14725160 stop_codon CG7530 FlyBase G51234.2 AGAACTTGAAGATCCGAACATCTGAGTTAAGATCCGAAGATCCGAGGAGCGGAGATGGAATCCGGGACTCTAGTAGACTAAAGCTTAGTGTAAATAGTTTATGGGGCGCTCTTTATCCGCTAATAACTAAT 72 14725089 0.853455756 12 68 342 0.962025316 1.880813592 0.455696203 0.097222222 0.17721519 72 3 0 76 3R:14725030-14725160 6 CG7530 FBtr0333277|FBtr0083019|FBtr0083021|FBtr0083020 14724758|14724758|14724758|14724758 14725158|14725158|14725158|14725158 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R - 14725000 14725125 3'utr CG7530 FlyBase G38711.1 GAAGATCCGAGGAGCGGAGATGGAATCCGGGACTCTAGTAGACTAAAGCTTAGTGTAAATAGTTTATGGGGCGCTCTTTATCCGCTAATAACTAATATTTAGTTGTAGTTGTTGACCGATATGATT 49 14725088 0.970372793 10 41 236 0.855072464 1.293730757 0.47826087 0.367346939 0.550724638 49 8 2 59 3R:14725000-14725125 6 43.5 2693 FBgn0038256 709.2933333 50.04333333 76.62666667 0.061328646 0.869246653 0.567687489 -3 -4 -3.5 0.15 dme-miR-980-5p 6mer3-8 GAAAAA 3R 14732766 14732771 - 3R_14732766_14732771_- 0.983250896 0.996963705 0.9901073 0.009696414 eff FBtr0336876|FBtr0083018|FBtr0310554 14732412|14732703|14732703 14733494|14733494|14733494 3R - 14732738 14732795 3'utr eff FlyBase G51245.1 AAAACTACAAATAAAAATCAGCTGGAAAAATTATTATTATTATTATTATATTATATTT 16 14732778 0.963372229 4 14 102 0.894736842 1.230448921 0 0.1875 0.315789474 16 2 0 17 3R:14732738-14732795 6 eff FBtr0083018|FBtr0310554|FBtr0336876 14732703|14732703|14732412 14733494|14733494|14733494 GAAAAA 6mer3-8 dme-miR-980-5p 3R - 14732754 14732854 3'utr eff FlyBase G38719.1 AAAGCTAGACAGCTACCAACAACAGCATCAACATAATAAGTTTAAATACAAAGAAAAACAAAACTACAAATAAAAATCAGCTGGAAAAATTATTATTATTA 10 14732778 0.929790846 6 9 38 1 1.113943352 0 0.2 0.384615385 10 0 0 13 3R:14732754-14732854 6 10 2694 FBgn0011217 11311.32 849.8066667 1308.386667 0.00088407 0.011767382 0.007643001 7 7 7 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 3R 14791755 14791760 + 3R_14791755_14791760_+ 0.999999214 0.99999985 0.999999532 4.24E-07 jvl FBtr0305694 14791293 14793735 3R + 14791741 14791773 3'utr jvl FlyBase G42822.1 AATTTAACAATGACTGTGTTGCCAATAGGAGTA 12 14791759 0.649346572 4 11 77 0.928571429 0.812913357 0.142857143 0.166666667 0.285714286 12 0 1 13 3R:14791741-14791773 6 jvl FBtr0305694 14791293 14793735 TGTGTT 6mer3-8 dme-miR-317-3p 3R + 14791741 14791772 3'utr jvl FlyBase G32355.1 AATTTAACAATGACTGTGTTGCCAATAGGAGT 12 14791758 0.667274197 5 11 74 0.941176471 1.204119983 0.176470588 0.25 0.470588235 12 1 0 16 3R:14791741-14791772 6 12 2695 FBgn0263929 908.0433333 17.64333333 26.93 0.013215228 0.680143586 0.445599703 -4 -3 -3.5 0.15 dme-miR-34-5p 7mer-m8 CACTGCC 3R 14792248 14792254 + 3R_14792248_14792254_+ 0.706658075 0.708858623 0.707758349 0.001555988 jvl FBtr0305694 14791293 14793735 3R + 14792179 14792271 3'utr jvl FlyBase G42823.1 TGCTATTGCTTTGGGTTTGGGTCGTTGACTCAACACTTGGCTAGTGAAAGGTGCATCCTATCAAACTCTCACTGCCTATCGATGCCTTAGGTG 15 14792247 0.973657867 6 15 94 1 1.255272505 0.277777778 0.2 0.333333333 15 0 0 18 3R:14792179-14792271 7 jvl FBtr0305694 14791293 14793735 CACTGCC 7mer-m8 dme-miR-34-5p 3R + 14792233 14792258 3'utr jvl FlyBase G32356.1 ATCCTATCAAACTCTCACTGCCTATC 5 14792247 0.746062544 2 5 27 1 0.903089987 0 0.6 0.75 5 0 0 8 3R:14792233-14792258 7 6 2696 FBgn0263929 908.0433333 17.64333333 26.93 0.006607614 0.340071793 0.222799851 1 1 1 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 14792541 14792547 + 3R_14792541_14792547_+ 0.655678591 0.655531336 0.655604963 0.000104157 jvl FBtr0305694 14791293 14793735 3R + 14792516 14792577 3'utr jvl FlyBase G42824.1 ATTGTTGGATCAGCCAGTTTCTCATTGTGTTCGAAAGTGAGTTTAAGCATAATTATTAGTTT 472 14792540 0.752758835 9 463 4416 0.980802792 2.272615061 0.422338569 0.167372881 0.314136126 472 9 2 562 3R:14792516-14792577 7 jvl FBtr0305694 14791293 14793735 TGTGTTC 7mer-m8 dme-miR-317-3p 3R + 14792515 14792563 3'utr jvl FlyBase G32357.1 CATTGTTGGATCAGCCAGTTTCTCATTGTGTTCGAAAGTGAGTTTAAGC 270 14792540 0.745441033 9 267 2446 0.990384615 2.31386722 0.408653846 0.374074074 0.59375 270 3 1 412 3R:14792515-14792563 7 367 2697 FBgn0263929 908.0433333 17.64333333 26.93 0.404165734 20.801058 13.62792425 1 1 1 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 3R 14793554 14793559 + 3R_14793554_14793559_+ 0.988222044 0.984728694 0.986475369 0.002470136 jvl FBtr0305690|FBtr0305694|FBtr0305693 14793489|14791293|14793489 14795868|14793735|14795868 3R + 14793523 14793613 3'utr jvl FlyBase G42826.1 CCATATTCGTGGACTAAAGGTGGTGTACTGATTGACTGATTGATTGACGTGTTGGTGGTGAATACATATATTTCGACTGCATGCCAAAAAT 22 14793554 0.985002362 8 22 178 1 1.414973348 0.538461538 0.181818182 0.307692308 22 0 0 26 3R:14793523-14793613 6 jvl FBtr0305691|FBtr0305689|FBtr0305694|FBtr0305690|FBtr0305693 14793489|14793489|14791293|14793489|14793489 14793607|14793607|14793735|14795868|14795868 TTGACT 6mer3-8 dme-miR-1012-3p 3R + 14793531 14793571 3'utr jvl FlyBase G32359.1 GTGGACTAAAGGTGGTGTACTGATTGACTGATTGATTGACG 12 14793554 0.953379137 4 12 99 1 1.255272505 0.5 0.416666667 0.611111111 12 0 0 18 3R:14793531-14793571 6 14 2698 FBgn0263929 908.0433333 17.64333333 26.93 0.015417766 0.79350085 0.51986632 0 0 0 0.15 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 14795186 14795191 + 3R_14795186_14795191_+ 0.915201294 0.553622268 0.734411781 0.255674963 jvl FBtr0305690|FBtr0305692|FBtr0305693|FBtr0305695 14793489|14795061|14793489|14795061 14795868|14795868|14795868|14795868 3R + 14795156 14795202 3'utr jvl FlyBase G42827.1 TCGAAAGAAAATGGATAAATATGTGTATGTAGCTGTAGTTTAGTGTT 5 14795185 0.992802336 3 5 44 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:14795156-14795202 6 jvl FBtr0305692|FBtr0305690|FBtr0305693|FBtr0305695 14795061|14793489|14793489|14795061 14795868|14795868|14795868|14795868 AGCTGT 6mer3-8 dme-miR-1008-3p 3R + 14795164 14795229 3'utr jvl FlyBase G32362.1 AAATGGATAAATATGTGTATGTAGCTGTAGTTTAGTGTTACGTGATGTGTATAATGTTGATTTAAA 8 14795183 0.980036023 4 7 81 0.9 0.954242509 0.3 0.25 0.4 8 1 0 9 3R:14795164-14795229 6 4.5 2699 FBgn0263929 908.0433333 17.64333333 26.93 0.004955711 0.255053845 0.167099889 1 3 2 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 3R 14889144 14889149 - 3R_14889144_14889149_- 0.999966746 0.999991471 0.999979108 1.75E-05 CycC FBtr0083010 14889002 14889193 3R - 14889100 14889182 3'utr CycC FlyBase G51267.1 AATCATTCATCATTAGCTGGTATTGCCCAATTGTGTGTTTGTACTCATATTACCAATGTATTTATGCCAATTAAACGAAAGTT 16 14889152 0.937424872 9 14 149 0.904761905 0.801632346 0.095238095 0.1875 0.380952381 16 0 2 19 3R:14889100-14889182 6 CycC FBtr0083010 14889002 14889193 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 14889096 14889170 3'utr CycC FlyBase G38736.1 TTAGCTGGTATTGCCCAATTGTGTGTTTGTACTCATATTACCAATGTATTTATGCCAATTAAACGAAAGTTTAAG 15 14889152 0.990981206 6 15 155 1 1.278753601 0.210526316 0.266666667 0.421052632 15 0 0 19 3R:14889096-14889170 6 10 2700 FBgn0004597 134.3233333 14.61666667 22.44333333 0.074447229 0.684150513 0.445566612 3 3 3 0.15 dme-miR-14-3p 7mer-A1 AGACTGA 3R 14896416 14896422 + 3R_14896416_14896422_+ 0.82332234 0.823344972 0.823333656 1.61E-05 CG14860 FBtr0289976 14895685 14896446 3R + 14896374 14896437 3'utr CG14860 FlyBase G42849.1 ACTGGCGGAAGAGTCCACTAAAAACACAAGAGACTAGACTTTAGACTGACTGAATAAATGTAAC 25 14896414 0.964034274 6 25 129 1 1.431363764 0.259259259 0.08 0.148148148 25 0 0 27 3R:14896374-14896437 7 CG14860 FBtr0289976 14895685 14896446 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 14896391 14896437 3'utr CG14860 FlyBase G32381.1 CTAAAAACACAAGAGACTAGACTTTAGACTGACTGAATAAATGTAAC 19 14896414 0.959361002 5 19 95 1 1.491361694 0.096774194 0.526315789 0.709677419 19 0 0 31 3R:14896391-14896437 7 21.5 2701 FBgn0038273 26.21 2.003333333 3.093333333 0.820297596 10.73211314 6.950431034 2 2 2 0.15 dme-miR-980-3p 6mer3-8 GGCAGC 3R 14902401 14902406 - 3R_14902401_14902406_- 0.982451053 0.999957688 0.991204371 0.012379036 VhaPPA1-1 FBtr0083005|FBtr0308030 14902328|14902328 14903233|14903233 3R - 14902342 14902422 3'utr VhaPPA1-1 FlyBase G51287.1 TCAAGCTACTGTTTGAGGCAGCAGTTGTAGATGGTTGCACAGTCGCATTATTATTATTATAGAAAGTATTCCATATTAAAA 20 14902409 0.992721159 7 14 166 0.782608696 1.255272505 0.304347826 0.1 0.217391304 20 5 0 18 3R:14902342-14902422 6 VhaPPA1-1 FBtr0308030|FBtr0083005 14902328|14902328 14903233|14903233 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 14902318 14902455 3'utr VhaPPA1-1 FlyBase G38747.1 ATTTACTACCGCAAAACGATAAACTTGTATATTTCAAGCTACTGTTTGAGGCAGCAGTTGTAGATGGTTGCACAGTCGCATTATTATTATTATAGAAAGTATTCCATATTAAAACAAATAAAATATATACGTTTTGTT 25 14902410 0.986804833 14 24 203 0.96969697 1.505149978 0.212121212 0.28 0.454545455 25 1 0 32 3R:14902318-14902455 6 11.5 2702 FBgn0028662 780.9733333 70.53333333 107.34 0.014725215 0.163043478 0.107136203 3 4 3.5 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 3R 14902524 14902529 - 3R_14902524_14902529_- 0.998725203 0.999853968 0.999289586 0.000798182 VhaPPA1-1 FBtr0083005|FBtr0308030 14902328|14902328 14903233|14903233 3R - 14902508 14902626 3'utr VhaPPA1-1 FlyBase G51289.1 ATCACTCAATCGACTGTGGAGTGTGCACGGTGTGAAAACGACCGTGATTTGTTTATTTCATTTCTTTGCCAAACGAAAGACATCGTGTGTGTGTGTCTGTGTTTGATTTTAAGCAGTTT 34 14902533 0.949568744 16 32 274 0.947368421 1.556302501 0.184210526 0.117647059 0.210526316 34 2 0 36 3R:14902508-14902626 6 VhaPPA1-1 FBtr0308030|FBtr0083005 14902328|14902328 14903233|14903233 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 14902510 14902550 3'utr VhaPPA1-1 FlyBase G38749.1 AAGACATCGTGTGTGTGTGTCTGTGTTTGATTTTAAGCAGT 7 14902533 0.847637649 5 7 79 1 1.079181246 0 0.285714286 0.583333333 7 0 0 12 3R:14902510-14902550 6 9 2703 FBgn0028662 780.9733333 70.53333333 107.34 0.011524081 0.127599244 0.083845724 4 4 4 0.15 dme-miR-965-3p 6mer2-7 ACGCTT 3R 14902713 14902718 - 3R_14902713_14902718_- 1 1 1 0 VhaPPA1-1 FBtr0083005|FBtr0308030 14902328|14902328 14903233|14903233 3R - 14902631 14902791 3'utr VhaPPA1-1 FlyBase G51290.1 GGAAATTACGACTCGCTATACGCAGTTACTGCTTGCAGGAGACGCCCGACAAACCGAAATCCGATCAGCCGTAACGCTTTAAACTAGGACTTAGTTACTCATTAAGATGATAGTTGGTTAAGTTGGCAGTTGGTTTTCACGCCTCGCACGCTCGCAGTCAC 128 14902712 0.858986765 26 119 899 0.935064935 1.681241237 0.155844156 0.1640625 0.305194805 128 8 2 144 3R:14902631-14902791 6 VhaPPA1-1 FBtr0308030|FBtr0083005 14902328|14902328 14903233|14903233 ACGCTT 6mer2-7 dme-miR-965-3p 3R - 14902667 14902793 3'utr VhaPPA1-1 FlyBase G38752.1 TTGGAAATTACGACTCGCTATACGCAGTTACTGCTTGCAGGAGACGCCCGACAAACCGAAATCCGATCAGCCGTAACGCTTTAAACTAGGACTTAGTTACTCATTAAGATGATAGTTGGTTAAGTTG 65 14902720 0.931094502 21 61 433 0.913043478 1.62324929 0.195652174 0.323076923 0.52173913 65 7 1 84 3R:14902667-14902793 6 59 2704 FBgn0028662 780.9733333 70.53333333 107.34 0.075546754 0.836483932 0.549655301 -6 2 -2 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 15079704 15079710 - 3R_15079704_15079710_- 0.643917697 0.519358069 0.581637883 0.088076938 CG6966 FBtr0344380 15079318 15081197 3R - 15079689 15079732 3'utr CG6966 FlyBase G51299.1 TGTGCATGTGTCTAGCCACCAATGTGTTCTGAAATGCAATTCGA 87 15079710 0.808859472 10 58 715 0.684210526 1.034762106 0.336842105 0.08045977 0.157894737 87 25 5 65 3R:15079689-15079732 7 CG6966 FBtr0344380 15079318 15081197 TGTGTTC 7mer-m8 dme-miR-317-3p 3R - 15079682 15079733 3'utr CG6966 FlyBase G38756.1 ATGTGCATGTGTCTAGCCACCAATGTGTTCTGAAATGCAATTCGATGTGCAT 66 15079709 0.820935604 11 39 543 0.59223301 1.086359831 0.466019417 0.424242424 0.631067961 66 38 4 61 3R:15079682-15079733 7 75.5 2705 FBgn0038286 1338.856667 38.3 58.94666667 0.056391399 1.971279373 1.280818819 0 -1 -0.5 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 15080753 15080759 - 3R_15080753_15080759_- 0.648066485 0.541500219 0.594783352 0.075353753 CG6966 FBtr0344380|FBtr0113236 15079318|15080451 15081197|15081197 3R - 15080602 15080782 3'utr CG6966 FlyBase G51302.1 ATGTTTTGAAACTTTCTTTAATATGTGTTCTTGCTACAACATTTTGTATGACTTATCATTAATAGAATATTGTATGTACTTGTACTATATGACCAAAAGCCTGGGCGTGATTGAGCAGCTTAATTTTAATTATCCTGGCATCAAGCCGACTCCTCAACGCTGCAGCAATCACGCCCAAGCC 80 15080752 0.900498151 22 76 655 0.950980392 1.685741739 0.019607843 0.2125 0.382352941 80 4 1 97 3R:15080602-15080782 7 CG6966 FBtr0344380|FBtr0113236 15079318|15080451 15081197|15081197 TGTGTTC 7mer-m8 dme-miR-317-3p 3R - 15080662 15080783 3'utr CG6966 FlyBase G38759.1 AATGTTTTGAAACTTTCTTTAATATGTGTTCTTGCTACAACATTTTGTATGACTTATCATTAATAGAATATTGTATGTACTTGTACTATATGACCAAAAGCCTGGGCGTGATTGAGCAGCTT 50 15080752 0.876621769 18 49 466 0.971428571 1.832508913 0.071428571 0.34 0.528571429 50 2 0 68 3R:15080662-15080783 7 25 2706 FBgn0038286 1338.856667 38.3 58.94666667 0.018672649 0.652741514 0.424112192 -7 -7 -7 0.15 dme-miR-11-3p 7mer-m1 TGTGATG 3R 15080947 15080953 - 3R_15080947_15080953_- 0.610366115 0.611057353 0.610711734 0.000488823 CG6966 FBtr0344380|FBtr0113236 15079318|15080451 15081197|15081197 3R - 15080893 15081078 3'utr CG6966 FlyBase G51303.1 TATCTAATACTACTATGACTACCGTCTATTTACTGTATAATTAGAGATGGAGAGAGAGTTCGAAACTATGCTGAATGATGAATGATGATATGGACGAGATCGTTACTAACGACTGGAAACTGATTTGTGATGTTAGCAAGCGAAGTGCCTGAATCGACGGATCAGGACGATAACTACTACAACTGA 783 15080955 0.979421794 36 718 4953 0.92513369 1.895623422 0.28342246 0.153256705 0.290909091 783 60 10 865 3R:15080893-15081078 7 CG6966 FBtr0344380|FBtr0113236 15079318|15080451 15081197|15081197 TGTGATG 7mer-m1 dme-miR-11-3p 3R - 15080891 15081048 3'utr CG6966 FlyBase G38760.1 TACTGTATAATTAGAGATGGAGAGAGAGTTCGAAACTATGCTGAATGATGAATGATGATATGGACGAGATCGTTACTAACGACTGGAAACTGATTTGTGATGTTAGCAAGCGAAGTGCCTGAATCGACGGATCAGGACGATAACTACTACAACTGACA 541 15080955 0.976444114 29 503 3251 0.931456548 2.103233406 0.298653611 0.390018484 0.596083231 541 51 5 761 3R:15080891-15081048 7 283.5 2707 FBgn0038286 1338.856667 38.3 58.94666667 0.211747835 7.402088773 4.809432255 2 2 2 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 15096529 15096535 - 3R_15096529_15096535_- 0.729888942 0.724592468 0.727240705 0.00374512 CG42788 FBtr0303485|FBtr0303485|FBtr0303485|FBtr0303486|FBtr0303486|FBtr0303486 15095955|15095955|15095955|15095955|15095955|15095955 15097627|15097627|15097627|15097627|15097627|15097627 3R - 15096512 15096551 3'utr CG42788 FlyBase G51320.1 AATCAAAATTTTAACTTGTGATATAAAAAAATGGAAAAAG 23 15096536 0.986396303 4 22 191 0.962962963 1.113943352 0 0.173913043 0.296296296 23 0 1 26 3R:15096512-15096551 7 CG42788 FBtr0303486|FBtr0303486|FBtr0303486|FBtr0303485|FBtr0303485|FBtr0303485 15095955|15095955|15095955|15095955|15095955|15095955 15097627|15097627|15097627|15097627|15097627|15097627 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 15096516 15096554 3'utr CG42788 FlyBase G38768.1 AATAATCAAAATTTTAACTTGTGATATAAAAAAATGGAA 21 15096537 0.664596539 6 20 179 0.96875 1.190331698 0 0.333333333 0.5625 21 0 1 31 3R:15096516-15096554 7 22 2708 FBgn0261859 601.7 10.87666667 16.7 0.036563071 2.022678517 1.317365269 1 2 1.5 0.15 dme-miR-1003-3p 6mer3-8 ATGTGA 3R 15097299 15097304 - 3R_15097299_15097304_- 0.973370603 0.888264058 0.93081733 0.060179383 CG42788 FBtr0303485|FBtr0303486 15095955|15095955 15097627|15097627 3R - 15097278 15097318 3'utr CG42788 FlyBase G51322.1 ATATCGAAACTGGAATGTGACAGCTCATAGGAAGACATCTT 20 15097301 0.904477643 4 20 85 1 1.361727836 0.304347826 0.15 0.260869565 20 0 0 23 3R:15097278-15097318 6 CG42788 FBtr0303486|FBtr0303485 15095955|15095955 15097627|15097627 ATGTGA 6mer3-8 dme-miR-1003-3p 3R - 15097261 15097316 3'utr CG42788 FlyBase G38770.1 ATCGAAACTGGAATGTGACAGCTCATAGGAAGACATCTTAGTCGATGTGGTGGAGT 12 15097301 0.915770827 4 11 51 0.916666667 1.342422681 0.333333333 0.666666667 0.833333333 12 2 0 22 3R:15097261-15097316 6 15 2709 FBgn0261859 601.7 10.87666667 16.7 0.024929367 1.379098989 0.898203593 -3 -3 -3 0.15 dme-miR-283-5p 6mer3-8 TGATAT 3R 15191142 15191147 - 3R_15191142_15191147_- 0.580533071 0.922673422 0.751603247 0.241929726 CG6752 FBtr0306246|FBtr0083029 15191056|15191056 15191305|15191305 3R - 15191101 15191173 3'utr CG6752 FlyBase G51358.1 TATGCTTGCCATTATAAGTTCAGATGTGATATGCCGAAAGTGCAATGAAAAGAAGTTTAAATAATGAGCTATT 23 15191142 0.981720688 7 19 130 0.884615385 1.361727836 0.192307692 0.086956522 0.192307692 23 3 0 23 3R:15191101-15191173 6 CG6752 FBtr0306246|FBtr0083029 15191056|15191056 15191305|15191305 TGATAT 6mer3-8 dme-miR-283-5p 3R - 15191128 15191159 3'utr CG6752 FlyBase G38806.1 TAAGTTCAGATGTGATATGCCGAAAGTGCAAT 14 15191142 0.783931973 4 10 69 0.736842105 1.146128036 0.105263158 0.384615385 0.578947368 13 5 0 14 3R:15191128-15191159 6 16 2710 FBgn0038296 195.79 5.47 8.353333333 0.08172021 2.925045704 1.915403033 -5 -5 -5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 15191257 15191264 - 3R_15191257_15191264_- 0.630950511 0.630614147 0.630782329 0.000237871 CG6752 FBtr0306246|FBtr0083029 15191056|15191056 15191305|15191305 3R - 15191236 15191306 stop_codon CG6752 FlyBase G51359.1 AGGAAAAACCCACCGATAGCAATCAAGGAAAGCCCAACCAAATCTAGTCAAACTCCTATGCTTTAAGTGTA 25 15191264 0.943774718 7 22 90 0.888888889 1.079181246 0.222222222 0.08 0.148148148 25 2 1 24 3R:15191236-15191306 8 CG6752 FBtr0306246|FBtr0083029 15191056|15191056 15191305|15191305 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R - 15191236 15191336 stop_codon CG6752 FlyBase G38807.1 AGTCCAGACGCCAATGATCGAGCGGGCCTAAGGAAAAACCCACCGATAGCAATCAAGGAAAGCCCAACCAAATCTAGTCAAACTCCTATGCTTTAAGTGTA 12 15191264 0.936155972 5 9 38 0.888888889 0.903089987 0.166666667 0.5 0.666666667 12 1 1 16 3R:15191236-15191336 8 12.5 2711 FBgn0038296 195.79 5.47 8.353333333 0.063843914 2.285191956 1.496408619 0 0 0 0.15 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3R 15202886 15202892 + 3R_15202886_15202892_+ 0.800818293 0.808818161 0.804818227 0.005656784 CG42542 FBtr0301101|FBtr0301101|FBtr0301104|FBtr0301104|FBtr0301102|FBtr0301102|FBtr0302325|FBtr0302325|FBtr0301103|FBtr0301103|FBtr0302324|FBtr0302324 15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444 15202977|15202977|15202977|15202977|15202977|15202977|15202973|15202973|15202977|15202977|15203074|15203074 3R + 15202823 15202897 3'utr CG42542 FlyBase G42873.1 GAGTTGTATCCTTTCCTTCATAACGCAGATCCTTATTCGCATATTTGTTTACGTAGCCGTGTTTACTTAATGGAA 7 15202884 0.915389841 6 6 68 0.857142857 0.77815125 0 0 0 7 1 0 6 3R:15202823-15202897 7 CG42542 FBtr0302325|FBtr0302325|FBtr0301102|FBtr0301102|FBtr0301104|FBtr0301104|FBtr0301101|FBtr0301101|FBtr0302324|FBtr0302324|FBtr0301103|FBtr0301103 15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444 15202973|15202973|15202977|15202977|15202977|15202977|15202977|15202977|15203074|15203074|15202977|15202977 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3R + 15202869 15202902 3'utr CG42542 FlyBase G32398.1 GTTTACGTAGCCGTGTTTACTTAATGGAAACAAC 8 15202883 0.81190218 4 7 54 1 1.204119983 0.125 0.625 0.8125 8 0 0 16 3R:15202869-15202902 7 5 2712 FBgn0260659 161.8666667 9.733333333 14.87666667 0.030889621 0.51369863 0.336096796 2 3 2.5 0.15 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 15222146 15222151 + 3R_15222146_15222151_+ 0.997523954 0.778474048 0.887999001 0.15489174 CG12241 FBtr0083051 15221954 15222371 3R + 15222121 15222226 3'utr CG12241 FlyBase G42898.1 TAAGTGCTTTACCATAACGATCTGTAGCTGTAACTATACCTTTAAAACGCCCTATGTATAGCTCGAGCCGTTTGTTTACTTAATGTCCATCCATTATTATAAATCC 31 15222144 0.791892975 16 28 255 0.885714286 1.491361694 0.085714286 0.129032258 0.228571429 31 4 0 31 3R:15222121-15222226 6 CG12241 FBtr0083051 15221954 15222371 AGCTGT 6mer3-8 dme-miR-1008-3p 3R + 15222104 15222217 3'utr CG12241 FlyBase G32411.1 TTGTCGTACACCTAACTTAAGTGCTTTACCATAACGATCTGTAGCTGTAACTATACCTTTAAAACGCCCTATGTATAGCTCGAGCCGTTTGTTTACTTAATGTCCATCCATTAT 24 15222146 0.98696807 14 21 188 0.857142857 1.477121255 0.114285714 0.291666667 0.514285714 24 5 0 30 3R:15222104-15222217 6 11.5 2713 FBgn0038304 479.84 19.50666667 29.96333333 0.023966322 0.589542037 0.383802425 2 0 1 0.15 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3R 15222197 15222203 + 3R_15222197_15222203_+ 0.803432871 0.808817161 0.806125016 0.003807275 CG12241 FBtr0083051|FBtr0083051 15221954|15221954 15222371|15222371 3R + 15222121 15222226 3'utr CG12241 FlyBase G42898.1 TAAGTGCTTTACCATAACGATCTGTAGCTGTAACTATACCTTTAAAACGCCCTATGTATAGCTCGAGCCGTTTGTTTACTTAATGTCCATCCATTATTATAAATCC 31 15222214 0.791892975 16 28 255 0.885714286 1.491361694 0.085714286 0.129032258 0.228571429 31 4 0 31 3R:15222121-15222226 7 CG12241 FBtr0083051|FBtr0083051 15221954|15221954 15222371|15222371 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3R + 15222104 15222217 3'utr CG12241 FlyBase G32411.1 TTGTCGTACACCTAACTTAAGTGCTTTACCATAACGATCTGTAGCTGTAACTATACCTTTAAAACGCCCTATGTATAGCTCGAGCCGTTTGTTTACTTAATGTCCATCCATTAT 24 15222193 0.98696807 14 21 188 0.857142857 1.477121255 0.114285714 0.291666667 0.514285714 24 5 0 30 3R:15222104-15222217 7 9.5 2714 FBgn0038304 479.84 19.50666667 29.96333333 0.019798266 0.487012987 0.317054177 -17 4 -6.5 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 3R 15222341 15222347 + 3R_15222341_15222347_+ 0.491246328 0.57101016 0.531128244 0.056401595 CG12241 FBtr0083051 15221954 15222371 3R + 15222325 15222363 3'utr CG12241 FlyBase G42899.1 TGTTTAACTGTCTAAATGCATTTCATTAAAGTTTAATAT 6 15222341 0.827373312 2 6 62 1 0.77815125 0 0 0 6 0 0 6 3R:15222325-15222363 7 CG12241 FBtr0083051 15221954 15222371 TGCATTT 7mer-m8 dme-miR-277-3p 3R + 15222316 15222363 3'utr CG12241 FlyBase G32412.1 ACACATAGATGTTTAACTGTCTAAATGCATTTCATTAAAGTTTAATAT 5 15222341 0.988230361 2 5 50 1 1 0 0.6 0.8 5 0 0 10 3R:15222316-15222363 7 5.5 2715 FBgn0038304 479.84 19.50666667 29.96333333 0.011462154 0.281954887 0.183557682 0 0 0 0.15 dme-miR-317-3p 8mer-A1 TGTGTTCA 3R 15257050 15257057 + 3R_15257050_15257057_+ 0.629789776 0.629730677 0.629760226 4.18E-05 CG42404 FBtr0305614|FBtr0345173 15255666|15252205 15257765|15257765 3R + 15257013 15257074 3'utr CG42404 FlyBase G42920.1 TTTTGGTTGTAATAGATCTCTGACCTGAAAACTGTATTGTGTTCAACGGATGCTCAAAAAAA 30 15257049 0.709878547 4 30 231 1 1.568201724 0.297297297 0.2 0.351351351 30 0 0 37 3R:15257013-15257074 8 CG42404 FBtr0345173|FBtr0305614 15252205|15255666 15257765|15257765 TGTGTTCA 8mer-A1 dme-miR-317-3p 3R + 15256994 15257071 3'utr CG42404 FlyBase G32430.1 AAAACGGTTCCTGTTCCGCTTTTGGTTGTAATAGATCTCTGACCTGAAAACTGTATTGTGTTCAACGGATGCTCAAAA 28 15257049 0.982652144 5 28 218 1 1.612783857 0.219512195 0.392857143 0.585365854 28 0 0 41 3R:15256994-15257071 8 21.5 2716 FBgn0259823 5.333333333 0.116666667 0.176666667 4.03125 184.2857143 121.6981132 1 1 1 0.15 dme-miR-980-3p 6mer3-8 GGCAGC 3R 15258305 15258310 - 3R_15258305_15258310_- 0.977154806 0.987536972 0.982345889 0.007341324 eIF-2gamma FBtr0337054|FBtr0310386|FBtr0310387 15257842|15257982|15257982 15258366|15258366|15258366 3R - 15258262 15258334 3'utr eIF-2gamma FlyBase G51437.2 AAGAACAACATCAGCGGCAAAAGTGGCAGCATCATCTTTATTAGGCCTCTTCACACTGCTCCTTCTTGTCCCA 37 15258311 0.960374812 11 36 146 1 1.602059991 0.125 0.054054054 0.125 37 0 0 40 3R:15258262-15258334 6 eIF-2gamma FBtr0310386|FBtr0337054|FBtr0310387 15257982|15257842|15257982 15258366|15258366|15258366 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 15258218 15258329 3'utr eIF-2gamma FlyBase G38860.1 CAACATCAGCGGCAAAAGTGGCAGCATCATCTTTATTAGGCCTCTTCACACTGCTCCTTCTTGTCCCACAGCTCCATTCTTCCCGTGTCCGTTGATCAAACCGAAACTAATT 28 15258311 0.966559253 12 27 143 0.973684211 1.267171728 0.078947368 0.321428571 0.5 28 0 1 37 3R:15258218-15258329 6 19.5 2717 FBgn0263740 1282.026667 78.22 119.4766667 0.015210292 0.249296855 0.163211785 1 1 1 0.15 dme-miR-92b-3p 7mer-m1 TGCAATT 3R 15265039 15265045 + 3R_15265039_15265045_+ 0.700837699 0.745522508 0.723180104 0.031596925 Set FBtr0083062 15265028 15265253 3R + 15265024 15265055 stop_codon Set FlyBase G42925.1 AAGTAAACTGATTAATGCAATTTCAAATCGCT 23 15265035 0.738934862 5 23 157 1 1.447158031 0.035714286 0.217391304 0.357142857 23 0 0 28 3R:15265024-15265055 7 Set FBtr0083062 15265028 15265253 TGCAATT 7mer-m1 dme-miR-92b-3p 3R + 15265024 15265051 stop_codon Set FlyBase G32436.1 AAGTAAACTGATTAATGCAATTTCAAAT 13 15265035 0.657963821 4 12 89 0.9375 1.176091259 0 0.153846154 0.3125 13 1 0 15 3R:15265024-15265051 7 18 2718 FBgn0014879 1526.92 162.5266667 250.57 0.011788437 0.110751056 0.071836213 4 4 4 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 15270283 15270289 + 3R_15270283_15270289_+ 0.658918543 0.658957634 0.658938088 2.76E-05 Zip88E FBtr0290018 15270194 15270532 3R + 15270189 15270310 stop_codon Zip88E FlyBase G42935.1 GGATTAGACATCTTTTCGTTGAGAAATCGTTTCAGCGCTGTGAGAAAATGTGCCGCTTTTTAAACTTAGAACACTTAGGATAATATTATGGATTGGCAGCTGTTAATCTCTTGTGTAAGACT 91 15270282 0.836167379 17 84 783 0.912621359 1.371067862 0.126213592 0.098901099 0.203883495 91 6 3 94 3R:15270189-15270310 7 Zip88E FBtr0290018 15270194 15270532 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 15270184 15270321 stop_codon Zip88E FlyBase G32446.1 GATGAGGATTAGACATCTTTTCGTTGAGAAATCGTTTCAGCGCTGTGAGAAAATGTGCCGCTTTTTAAACTTAGAACACTTAGGATAATATTATGGATTGGCAGCTGTTAATCTCTTGTGTAAGACTTGTTACTTGTG 75 15270281 0.836996111 22 73 663 0.971962617 2.017033339 0.121495327 0.346666667 0.542056075 75 3 0 104 3R:15270184-15270321 7 51.5 2719 FBgn0038312 158.6266667 12.80333333 19.79 0.324661679 4.022390003 2.602324406 1 2 1.5 0.15 dme-miR-184-5p 6mer2-7 GATAAG 3R 15270368 15270373 + 3R_15270368_15270373_+ 0.999735611 0.999251041 0.999493326 0.000342664 Zip88E FBtr0290018 15270194 15270532 3R + 15270329 15270464 3'utr Zip88E FlyBase G42936.1 AACTAATCTTGTTTTAGGTACATTGTCGATCTGCCGTAGGATAAGTAAAAAGTTCAGTCTTCTCGTCTACATTTATATTTTCTCTTTCTCCAAAGTTTGTGTTATTTTTTATGCTTTTATTATATGTAATAAACCT 32 15270351 0.987003131 12 28 269 0.942857143 1.51851394 0.2 0.129032258 0.228571429 31 2 0 33 3R:15270329-15270464 6 Zip88E FBtr0290018 15270194 15270532 GATAAG 6mer2-7 dme-miR-184-5p 3R + 15270337 15270383 3'utr Zip88E FlyBase G32447.1 TTGTTTTAGGTACATTGTCGATCTGCCGTAGGATAAGTAAAAAGTTC 15 15270351 0.672447414 5 14 114 1 1.447158031 0.071428571 0.6 0.785714286 15 0 0 28 3R:15270337-15270383 6 14 2720 FBgn0038312 158.6266667 12.80333333 19.79 0.088257544 1.093465243 0.707427994 17 17 17 0.15 dme-miR-2b-2-5p 6mer2-7 TGAAGA 3R 15270928 15270933 - 3R_15270928_15270933_- 0.999990938 0.999664959 0.999827949 0.000230446 Cp190 FBtr0083127|FBtr0083126 15270430|15270430 15271042|15271042 3R - 15270863 15271020 3'utr Cp190 FlyBase G51457.1 AAGTTTGGCGATTCAACGCAGGTCAGCAGATAAACGCACCTGAGCTCGGCGCGAATTTTCGGTTTCTATTGTAAATTAAATTGTTAATGAAGATCAAGGTGAATGATAAGATATGCATATGCACTGGTTTAAGTGTATAAGATCTAATCTACTCATCT 82 15270933 0.858714814 25 82 444 1 1.995635195 0.050505051 0.146341463 0.292929293 82 0 0 99 3R:15270863-15271020 6 Cp190 FBtr0083126|FBtr0083127 15270430|15270430 15271042|15271042 TGAAGA 6mer2-7 dme-miR-2b-2-5p 3R - 15270884 15271006 3'utr Cp190 FlyBase G38876.1 AACGCAGGTCAGCAGATAAACGCACCTGAGCTCGGCGCGAATTTTCGGTTTCTATTGTAAATTAAATTGTTAATGAAGATCAAGGTGAATGATAAGATATGCATATGCACTGGTTTAAGTGTA 37 15270933 0.974210245 8 35 190 1 1.748188027 0.053571429 0.378378378 0.589285714 37 0 0 56 3R:15270884-15271006 6 34.5 2721 FBgn0000283 4864.516667 141.61 217.1233333 0.007092174 0.243626863 0.158895866 0 0 0 0.15 dme-miR-980-3p 8mer-A1 GGCAGCTA 3R 15304166 15304173 + 3R_15304166_15304173_+ 0.665147379 0.665279735 0.665213557 9.36E-05 Tm1 FBtr0089968|FBtr0089960 15303722|15303722 15304972|15304529 3R + 15304115 15304199 5'utr Tm1 FlyBase G42962.1 CGATTACGTCGATATTTTCGATACCATTTCGCAAAATTCGAACGGTTGACTGGCAGCTAGCGCCATTTTACTATACTGTTGCAAT 881 15304165 0.945565852 9 863 3587 0.977055449 2.106360909 0.078393881 0.157775255 0.290630975 881 17 7 1022 3R:15304115-15304199 8 Tm1 FBtr0089960|FBtr0089968 15303722|15303722 15304529|15304972 GGCAGCTA 8mer-A1 dme-miR-980-3p 3R + 15304102 15304187 5'utr Tm1 FlyBase G32465.2 ATTTCGATATTTTCGATTACGTCGATATTTTCGATACCATTTCGCAAAATTCGAACGGTTGACTGGCAGCTAGCGCCATTTTACTA 536 15304165 0.864957285 10 527 2046 0.984486874 2.615423953 0.076372315 0.391791045 0.61097852 536 12 1 825 3R:15304102-15304187 8 704 2722 FBgn0003721 5849.68 316.09 484.7266667 0.120348464 2.227213768 1.452364907 1 1 1 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 15304848 15304853 + 3R_15304848_15304853_+ 0.99998432 0.999998561 0.999991441 1.01E-05 Tm1 FBtr0089968 15303722 15304972 3R + 15304815 15304887 3'utr Tm1 FlyBase G42966.1 CTGCAACAAGAAATGGCATTAAAAATTCTAATTTGATCTATTTACGATTTACATAAATTAATTATTTATACTT 55 15304847 0.990927098 10 53 558 0.971014493 1.826074803 0.014492754 0.218181818 0.376811594 55 2 0 67 3R:15304815-15304887 6 Tm1 FBtr0089968 15303722 15304972 TGATCT 6mer3-8 dme-bantam-3p 3R + 15304772 15304888 3'utr Tm1 FlyBase G32470.1 TGATTCTGAATGCCGTGACACCCAAATGAAGATAAAACGAATGCTGCAACAAGAAATGGCATTAAAAATTCTAATTTGATCTATTTACGATTTACATAAATTAATTATTTATACTTT 44 15304847 0.988145618 12 41 379 0.953125 1.484299839 0.015625 0.363636364 0.5625 44 2 1 61 3R:15304772-15304888 6 41.5 2723 FBgn0003721 5849.68 316.09 484.7266667 0.007094405 0.131291721 0.085615261 1 1 1 0.15 dme-miR-1008-3p 6mer2-7 GCTGTG 3R 15318315 15318320 - 3R_15318315_15318320_- 0.99990967 0.998954338 0.999432004 0.00067557 CG6276 FBtr0083123 15318201 15318439 3R - 15318263 15318338 3'utr CG6276 FlyBase G51492.1 AAGAATCCTTTAAGCTTCGCTGTGCAAGAACAAAGTATCCTTAAAAACGTTTTGAAAACTATCCGGTATGTTTATT 10 15318323 0.976179382 5 9 60 0.9 0.653212514 0 0 0 10 0 1 9 3R:15318263-15318338 6 CG6276 FBtr0083123 15318201 15318439 GCTGTG 6mer2-7 dme-miR-1008-3p 3R - 15318303 15318338 3'utr CG6276 FlyBase G38902.1 AAGAATCCTTTAAGCTTCGCTGTGCAAGAACAAAGT 7 15318323 0.958332996 3 7 37 1 1 0 0.285714286 0.5 7 0 0 10 3R:15318303-15318338 6 7.5 2724 FBgn0038316 98.66666667 6.676666667 10.25333333 0.076013514 1.123315027 0.731469441 3 3 3 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 3R 15324537 15324542 + 3R_15324537_15324542_+ 0.995135303 0.99327085 0.994203076 0.001318401 ear FBtr0334695 15324283 15325279 3R + 15324504 15324562 3'utr ear FlyBase G42978.1 ATTGAAGTCGTCCTTTAGTTTTTGAGACTCATTTGTGTTAAGACTCGTTTCGTTTAAGA 203 15324526 0.738728478 16 197 2210 0.966527197 2.36361198 0.167364017 0.157635468 0.284518828 203 8 0 231 3R:15324504-15324562 6 ear FBtr0334695 15324283 15325279 TGTGTT 6mer3-8 dme-miR-317-3p 3R + 15324475 15324558 3'utr ear FlyBase G32479.1 AAGACCCAATCGATTTCGTTTTTCAAAATATTGAAGTCGTCCTTTAGTTTTTGAGACTCATTTGTGTTAAGACTCGTTTCGTTT 94 15324526 0.99162419 18 89 967 0.944444444 2.133538908 0.097222222 0.372340426 0.590277778 94 8 0 136 3R:15324475-15324558 6 137.5 2725 FBgn0026441 968.99 34.99666667 53.49 0.141900329 3.928945614 2.570573939 11 11 11 0.15 dme-miR-92b-3p 7mer-m1 TGCAATT 3R 15324580 15324586 + 3R_15324580_15324586_+ 0.762189581 0.678457619 0.7203236 0.059207465 ear FBtr0334695 15324283 15325279 3R + 15324580 15324616 3'utr ear FlyBase G42979.1 TGCAATTATACACTAACGCGACGATTTTAACGTTCTA 8 15324586 0.886065438 2 8 40 1 0.954242509 0.333333333 0.125 0.222222222 8 0 0 9 3R:15324580-15324616 6 ear FBtr0334695 15324283 15325279 TGCAATT 7mer-m1 dme-miR-92b-3p 3R + 15324583 15324627 3'utr ear FlyBase G32480.1 AATTATACACTAACGCGACGATTTTAACGTTCTACGCATTTGCTA 7 15324586 0.979053742 4 6 41 0.818181818 0.954242509 0 0.571428571 0.727272727 7 2 0 9 3R:15324583-15324627 3 7 2726 FBgn0026441 968.99 34.99666667 53.49 0.007224017 0.200019049 0.130865582 -6 -6 -6 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 15325437 15325443 - 3R_15325437_15325443_- 0.822363701 0.822098579 0.82223114 0.000187454 CG6236 FBtr0083122|FBtr0083121 15325323|15325323 15325538|15325538 3R - 15325418 15325501 3'utr CG6236 FlyBase G51496.1 GCTAAGCAATCAACTGGAATAGATTTCTGCACTGATTGTAGATTTTAGATTACTCCTTCCAAAGAATATTGTCACTGGCTCCTT 95 15325445 0.7932172 18 90 749 0.964285714 1.73239376 0.241071429 0.159574468 0.294642857 94 3 1 108 3R:15325418-15325501 7 CG6236 FBtr0083122|FBtr0083121 15325323|15325323 15325538|15325538 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 15325411 15325534 3'utr CG6236 FlyBase G38907.1 TGCACAAAATGACAAGTCCAAAACATAGAAACTGCTAAGCAATCAACTGGAATAGATTTCTGCACTGATTGTAGATTTTAGATTACTCCTTCCAAAGAATATTGTCACTGGCTCCTTAAGTTAA 68 15325445 0.987197544 19 61 526 0.913043478 1.447158031 0.119565217 0.235294118 0.434782609 68 6 2 84 3R:15325411-15325534 7 62 2727 FBgn0038318 770.0133333 38.62666667 58.75333333 0.080518086 1.605108733 1.055259276 2 2 2 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 3R 15342110 15342115 + 3R_15342110_15342115_+ 0.412400157 0.369486359 0.390943258 0.030344639 Aats-ser FBtr0334589 15342088 15343218 3R + 15342046 15342149 stop_codon Aats-ser FlyBase G43022.1 AACGGATACCGGAGACGAAGCTGGTCAAATTCATCAAGGCCTAGGCTTAACACATTCTGTACCTTTGACTGTTATCATTAAATCGTTGGGCTTATCAACGAAAG 222 15342103 0.987810636 18 216 1941 0.975 1.959041392 0.189285714 0.202702703 0.367857143 222 5 2 273 3R:15342046-15342149 6 Aats-ser FBtr0334589 15342088 15343218 TTGACT 6mer3-8 dme-miR-1012-3p 3R + 15342071 15342136 stop_codon Aats-ser FlyBase G32510.1 CAAATTCATCAAGGCCTAGGCTTAACACATTCTGTACCTTTGACTGTTATCATTAAATCGTTGGGC 127 15342103 0.985296864 9 124 1069 0.978947368 1.968482949 0.226315789 0.362204724 0.573684211 127 3 1 186 3R:15342071-15342136 6 169.5 2728 FBgn0021750 239.2133333 16.63 25.6 0.708572543 10.19242333 6.62109375 7 7 7 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 3R 15344215 15344220 - 3R_15344215_15344220_- 0.687556705 0.716054636 0.701805671 0.020151058 Surf4 FBtr0083117 15343651 15344263 3R - 15344057 15344272 stop_codon Surf4 FlyBase G51515.1 AAGTGGTAGAGGCCAGGCAACGGTCGCTCCTTGAACGAAACACTTTCAACATTTGACTTTTACCGTGTTTTACTCCTTCTGAGAAATGTTAGTTAGGAATTACCATAAAATGGGACAACAACAGGAGCAGCATCAGCAGCACAACACCGGCACGTATAAGAACTTGACAATTTTCAATAAAGGGACTTCCGCAATACCCCTCTCCAATGGCTCACT 65 15344213 0.985419434 23 62 495 0.949367089 1.875061263 0.075949367 0.184615385 0.329113924 65 4 0 75 3R:15344057-15344272 6 Surf4 FBtr0083117 15343651 15344263 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 15344165 15344236 3'utr Surf4 FlyBase G38920.1 GAAACACTTTCAACATTTGACTTTTACCGTGTTTTACTCCTTCTGAGAAATGTTAGTTAGGAATTACCATAA 34 15344214 0.987185341 6 33 289 0.98 1.69019608 0.06 0.352941176 0.56 34 1 0 49 3R:15344165-15344236 6 35.5 2729 FBgn0019925 766.2766667 57.29666667 87.82333333 0.046327915 0.619582291 0.404220594 -7 -6 -6.5 0.15 dme-bantam-3p 7mer-m8 TGATCTC 3R 15349509 15349515 + 3R_15349509_15349515_+ 0.661615241 0.661615243 0.661615242 0 CG42726 FBtr0303074 15349502 15350391 3R + 15349468 15349553 stop_codon CG42726 FlyBase G43033.1 AAATATTGGTACCAAAAAGAAGAAAACACAAAGTGACGATATGATCTCTAATGAGTTGGCCCTTTTTCAAAGGGGTCCTCTAATTT 123 15349509 0.929379053 9 117 837 0.959459459 1.67516709 0.304054054 0.170731707 0.310810811 123 4 2 142 3R:15349468-15349553 7 CG42726 FBtr0303074 15349502 15350391 TGATCTC 7mer-m8 dme-bantam-3p 3R + 15349491 15349544 stop_codon CG42726 FlyBase G32519.2 AAACACAAAGTGACGATATGATCTCTAATGAGTTGGCCCTTTTTCAAAGGGGTC 79 15349509 0.629600397 6 74 529 0.93495935 2.06069784 0.422764228 0.405063291 0.617886179 79 8 0 115 3R:15349491-15349544 7 95.5 2730 FBgn0261679 36.5 1.936666667 2.98 2.616438356 49.31153184 32.04697987 0 0 0 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3R 15350339 15350345 + 3R_15350339_15350345_+ 0.403136548 0.633532776 0.518334662 0.162914786 CG42726 FBtr0303074 15349502 15350391 3R + 15350323 15350393 3'utr CG42726 FlyBase G43037.1 CGAAAAGATAGCCTAGTCTAGTCTGTAGTATCTCTATAATTGTAGTAATAAACCATTGCCTTACATCCTAA 16 15350346 0.806823183 4 16 124 1 1.255272505 0.222222222 0.125 0.222222222 16 0 0 18 3R:15350323-15350393 7 CG42726 FBtr0303074 15349502 15350391 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 15350322 15350391 3'utr CG42726 FlyBase G32521.1 ACGAAAAGATAGCCTAGTCTAGTCTGTAGTATCTCTATAATTGTAGTAATAAACCATTGCCTTACATCCT 10 15350348 0.855725241 8 10 82 1 1.146128036 0.142857143 0.4 0.571428571 10 0 0 14 3R:15350322-15350391 7 9 2731 FBgn0261679 36.5 1.936666667 2.98 0.246575342 4.647160069 3.020134228 -7 -9 -8 0.15 dme-miR-317-5p 7mer-A1 TATCCCA 3R 15353678 15353684 + 3R_15353678_15353684_+ 0.816388299 0.823103606 0.819745952 0.004748434 CG5038 FBtr0083089 15353467 15353926 3R + 15353669 15353712 3'utr CG5038 FlyBase G43044.1 ATACATTCATATCCCATCAGCTAAAATCTCATGACACCCTAATT 38 15353690 0.791775568 6 35 232 0.926829268 1.579783597 0 0.078947368 0.146341463 38 3 0 38 3R:15353669-15353712 7 CG5038 FBtr0083089 15353467 15353926 TATCCCA 7mer-A1 dme-miR-317-5p 3R + 15353636 15353713 3'utr CG5038 FlyBase G32523.1 AATTTTAATTCCGTGCAATATTGTATCTATATCATACATTCATATCCCATCAGCTAAAATCTCATGACACCCTAATTG 30 15353690 0.771969573 8 30 195 1 1.643452676 0.022727273 0.4 0.590909091 30 0 0 44 3R:15353636-15353713 7 27.5 2732 FBgn0038324 139.0933333 6.273333333 9.646666667 0.197708972 4.383634431 2.850725639 -12 -12 -12 0.15 dme-miR-7-5p 7mer-m8 GTCTTCC 3R 15358864 15358870 + 3R_15358864_15358870_+ 0.704026279 0.697227824 0.700627051 0.004807265 CG5044 FBtr0083091|FBtr0083090 15358810|15358810 15359263|15359263 3R + 15358834 15358903 3'utr CG5044 FlyBase G43056.1 TTGTTTGAGCCTTGGCATCCAATCCTGTTTGTCTTCCGTTGAGCCGCTCATTCTTATATGCACACAACTT 33 15358872 0.988527127 8 32 296 0.941176471 1.028028724 0.029411765 0.03030303 0.058823529 33 0 2 32 3R:15358834-15358903 7 CG5044 FBtr0083091|FBtr0083090 15358810|15358810 15359263|15359263 GTCTTCC 7mer-m8 dme-miR-7-5p 3R + 15358839 15358916 3'utr CG5044 FlyBase G32535.1 TGAGCCTTGGCATCCAATCCTGTTTGTCTTCCGTTGAGCCGCTCATTCTTATATGCACACAACTTAATATCTTTGTAT 32 15358884 0.988470746 8 29 277 0.957446809 1.653212514 0.106382979 0.40625 0.595744681 32 2 0 45 3R:15358839-15358916 7 19 2733 FBgn0038326 271.75 19.3 29.30333333 0.069917203 0.984455959 0.648390399 -8 -20 -14 0.15 dme-miR-33-5p 7mer-m8 CAATGCA 3R 15359125 15359131 + 3R_15359125_15359131_+ 0.667598896 0.667085378 0.667342137 0.000363099 CG5044 FBtr0083091|FBtr0083090 15358810|15358810 15359263|15359263 3R + 15359076 15359159 3'utr CG5044 FlyBase G43059.1 CGAGGAAGAATCCTATTCGCCGGTATTTACCAATAACGATTGTGAAATTCAATGCATTTAAATATATGATATACATATATGCCT 248 15359124 0.747358497 19 239 2059 0.963934426 1.866287339 0.055737705 0.185483871 0.337704918 248 8 3 294 3R:15359076-15359159 7 CG5044 FBtr0083091|FBtr0083090 15358810|15358810 15359263|15359263 CAATGCA 7mer-m8 dme-miR-33-5p 3R + 15359076 15359147 3'utr CG5044 FlyBase G32537.1 CGAGGAAGAATCCTATTCGCCGGTATTTACCAATAACGATTGTGAAATTCAATGCATTTAAATATATGATAT 138 15359123 0.734142341 17 132 1103 0.97029703 1.593286067 0.059405941 0.333333333 0.544554455 138 2 4 196 3R:15359076-15359147 7 163 2734 FBgn0038326 271.75 19.3 29.30333333 0.599816007 8.445595855 5.56250711 1 2 1.5 0.15 dme-miR-305-3p 6mer2-7 TGTGCC 3R 15359203 15359208 + 3R_15359203_15359208_+ 0.997253067 0.980711438 0.988982252 0.011696748 CG5044 FBtr0083091|FBtr0083090 15358810|15358810 15359263|15359263 3R + 15359174 15359237 3'utr CG5044 FlyBase G43060.1 CAATTCGTAGTCCTAATACAATCAATAATTGTGCCTAAAGAATCGTTAGAATTCGTTTACCAAG 28 15359203 0.974200209 7 27 169 1 1.556302501 0.222222222 0.214285714 0.388888889 28 0 0 36 3R:15359174-15359237 6 CG5044 FBtr0083091|FBtr0083090 15358810|15358810 15359263|15359263 TGTGCC 6mer2-7 dme-miR-305-3p 3R + 15359182 15359230 3'utr CG5044 FlyBase G32538.1 AGTCCTAATACAATCAATAATTGTGCCTAAAGAATCGTTAGAATTCGTT 28 15359203 0.946681984 6 24 162 0.925 1.267171728 0.075 0.259259259 0.5 27 2 1 37 3R:15359182-15359230 6 23.5 2735 FBgn0038326 271.75 19.3 29.30333333 0.086476541 1.21761658 0.801956546 0 0 0 0.15 dme-miR-1012-3p 6mer2-7 TGACTA 3R 15362893 15362898 - 3R_15362893_15362898_- 0.979938295 0.644650286 0.81229429 0.237084418 CG6171 FBtr0083113 15362794 15363143 3R - 15362847 15362908 stop_codon CG6171 FlyBase G51545.1 TAAGTGGGGATGACTATGATTAGACTATAAATTCAAATTCGCTGTTAACTTAGATGATACGT 29 15362898 0.772267509 9 28 227 1 1.51851394 0.242424242 0.103448276 0.212121212 29 0 0 33 3R:15362847-15362908 6 CG6171 FBtr0083113 15362794 15363143 TGACTA 6mer2-7 dme-miR-1012-3p 3R - 15362833 15362919 stop_codon CG6171 FlyBase G38944.1 TAGCCAACCAATAAGTGGGGATGACTATGATTAGACTATAAATTCAAATTCGCTGTTAACTTAGATGATACGTTCCATTTGCCGAAT 24 15362891 0.984049465 10 23 181 0.95 1.579783597 0.2 0.5 0.7 24 2 0 38 3R:15362833-15362919 6 21 2736 FBgn0026737 228.3266667 29.69333333 45.44333333 0.091973488 0.707229457 0.462113988 0 -7 -3.5 0.15 dme-miR-184-3p 7mer-A1 CCGTCCA 3R 15362964 15362970 - 3R_15362964_15362970_- 0.801789575 0.804243348 0.803016461 0.001735028 CG6171 FBtr0083113 15362794 15363143 3R - 15362940 15362989 3'utr CG6171 FlyBase G51546.1 ATGACAGGGATGCGGACTACCGTCCAGGCGCAGACATAAACGAAGATGAG 32 15362972 0.843204968 3 30 81 0.925 1.568201724 0.3 0.15625 0.325 32 3 0 37 3R:15362940-15362989 7 CG6171 FBtr0083113 15362794 15363143 CCGTCCA 7mer-A1 dme-miR-184-3p 3R - 15362933 15362987 3'utr CG6171 FlyBase G38945.1 GACAGGGATGCGGACTACCGTCCAGGCGCAGACATAAACGAAGATGAGGATGATG 19 15362972 0.852261304 4 19 45 1 1.447158031 0.357142857 0.368421053 0.571428571 19 0 0 28 3R:15362933-15362987 7 24.5 2737 FBgn0026737 228.3266667 29.69333333 45.44333333 0.107302403 0.825101033 0.539132986 2 2 2 0.15 dme-miR-276a-3p 6mer3-8 AGTTCC 3R 15415344 15415349 + 3R_15415344_15415349_+ 0.930397097 0.988347909 0.959372503 0.040977404 Atx2 FBtr0083101 15415017 15416472 3R + 15415319 15415375 5'utr Atx2 FlyBase G43083.1 CCGTCGCCGGGCCAGCCGCACCAGCAGTTCCATCCGCCGCCACAGCCATCCCCCGCC 33 15415346 0.845266121 2 32 69 0.972222222 1.544068044 0.111111111 0.090909091 0.166666667 33 1 0 35 3R:15415319-15415375 6 Atx2 FBtr0083101 15415017 15416472 AGTTCC 6mer3-8 dme-miR-276a-3p 3R + 15415321 15415374 5'utr Atx2 FlyBase G32555.1 GTCGCCGGGCCAGCCGCACCAGCAGTTCCATCCGCCGCCACAGCCATCCCCCGC 13 15415346 0.836030545 2 11 27 0.789473684 1.176091259 0.263157895 0.384615385 0.578947368 13 4 0 15 3R:15415321-15415374 6 21.5 2738 FBgn0041188 1154.45 29.14333333 44.74333333 0.018623587 0.737733044 0.480518513 -2 -2 -2 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 15417160 15417165 + 3R_15417160_15417165_+ 0.997681602 0.998086173 0.997883888 0.000286095 Atx2 FBtr0083100|FBtr0344377 15415551|15415551 15417277|15417277 3R + 15417099 15417188 3'utr Atx2 FlyBase G43090.1 TAACAAGAACAATCCGTATTACTTCTTTGCCCGTCATAAATCGGTTTGGTTATATTTCGTATGATCTAGAAGCATCTGTTGTGGTCTGTT 216 15417160 0.989513633 9 213 2063 0.987654321 2.380211242 0.432098765 0.111111111 0.209876543 216 3 0 240 3R:15417099-15417188 6 Atx2 FBtr0083100|FBtr0344377 15415551|15415551 15417277|15417277 TGATCT 6mer3-8 dme-bantam-3p 3R + 15417123 15417188 3'utr Atx2 FlyBase G32559.1 CTTTGCCCGTCATAAATCGGTTTGGTTATATTTCGTATGATCTAGAAGCATCTGTTGTGGTCTGTT 100 15417160 0.919584414 7 95 910 0.952662722 2.206825876 0.455621302 0.46 0.680473373 100 8 0 161 3R:15417123-15417188 6 154.5 2739 FBgn0041188 1154.45 29.14333333 44.74333333 0.133829962 5.301383964 3.453028384 0 0 0 0.15 dme-miR-34-5p 8mer-A1 CACTGCCA 3R 15442401 15442408 - 3R_15442401_15442408_- 0.678352575 0.678273639 0.678313107 5.59E-05 AdamTS-A FBtr0334629|FBtr0339398|FBtr0083160 15442244|15442244|15442244 15443238|15443238|15443238 3R - 15442350 15442423 3'utr AdamTS-A FlyBase G51563.1 TTGATTGATTGTTATCACTGCCAGATTTTCAACGTTCAATCGATTGTATCCCAAATCGCCTAAGTCCCGGTACC 62 15442410 0.748186109 15 55 491 0.884057971 1.183269844 0.536231884 0.112903226 0.202898551 62 5 3 61 3R:15442350-15442423 8 AdamTS-A FBtr0083160|FBtr0339398|FBtr0334629 15442244|15442244|15442244 15443238|15443238|15443238 CACTGCCA 8mer-A1 dme-miR-34-5p 3R - 15442277 15442427 3'utr AdamTS-A FlyBase G38954.1 ACTCTTGATTGATTGTTATCACTGCCAGATTTTCAACGTTCAATCGATTGTATCCCAAATCGCCTAAGTCCCGGTACCAAGTATCCTCGCTGTATTTTCATTTAACTAGCTAGGCTAATGCAAAACCAATGTTAACAATTAATTTAATGTC 64 15442409 0.985814981 23 59 493 0.94 1.672097858 0.43 0.34375 0.58 64 5 1 94 3R:15442277-15442427 8 45 2740 FBgn0038341 333.3333333 5.796666667 8.936666667 0.135 7.763082231 5.035434539 2 1 1.5 0.15 dme-miR-1003-3p 7mer-m8 ATGTGAG 3R 15442900 15442906 - 3R_15442900_15442906_- 0.666785664 0.67176551 0.669275587 0.00352125 AdamTS-A FBtr0334629|FBtr0339398|FBtr0083160 15442244|15442244|15442244 15443238|15443238|15443238 3R - 15442807 15442959 3'utr AdamTS-A FlyBase G51566.1 AGTAACTAGATATTATTGCCATGTAATGTATTAAGTATTGTAAATACTAGAGGATGTGAGCCTTTGAATTAGCAAATAGGGATTATCCATCATCATAGGTCGTCGCTCAGATAAGCCCGTATTTGTGCCAACTCCGGTATGCAGTGATGGAAG 31 15442903 0.97447262 19 31 225 1 1.544068044 0.142857143 0.096774194 0.2 31 0 0 35 3R:15442807-15442959 7 AdamTS-A FBtr0083160|FBtr0339398|FBtr0334629 15442244|15442244|15442244 15443238|15443238|15443238 ATGTGAG 7mer-m8 dme-miR-1003-3p 3R - 15442877 15442957 3'utr AdamTS-A FlyBase G38958.1 TAACTAGATATTATTGCCATGTAATGTATTAAGTATTGTAAATACTAGAGGATGTGAGCCTTTGAATTAGCAAATAGGGAT 19 15442903 0.962982093 8 17 136 0.904761905 0.977723605 0 0.105263158 0.19047619 19 1 1 19 3R:15442877-15442957 7 15 2741 FBgn0038341 333.3333333 5.796666667 8.936666667 0.045 2.587694077 1.67847818 -3 -3 -3 0.15 dme-miR-282-5p 6mer2-7 GAGGCT 3R 15493037 15493042 + 3R_15493037_15493042_+ 0.998061983 0.993994212 0.996028097 0.002876369 CG5205 FBtr0083147 15492984 15493310 3R + 15493003 15493063 3'utr CG5205 FlyBase G43107.1 AAATCTAAAGTGTACCGTAGCATTCTGTAGAGTTGAGGCTTAACTTTTAGTTAATGGAGTT 15 15493036 0.968047578 8 15 112 1 1.255272505 0 0.2 0.333333333 15 0 0 18 3R:15493003-15493063 6 CG5205 FBtr0083147 15492984 15493310 GAGGCT 6mer2-7 dme-miR-282-5p 3R + 15493003 15493057 3'utr CG5205 FlyBase G32565.1 AAATCTAAAGTGTACCGTAGCATTCTGTAGAGTTGAGGCTTAACTTTTAGTTAAT 23 15493036 0.836384674 6 23 197 1 1.602059991 0 0.434782609 0.675 23 0 0 40 3R:15493003-15493057 6 16 2742 FBgn0038344 937.8966667 16.18666667 24.77666667 0.017059449 0.988467875 0.645768869 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 15493142 15493147 + 3R_15493142_15493147_+ 0.999999576 0.999999988 0.999999782 2.83E-07 CG5205 FBtr0083147|FBtr0083147|FBtr0083147 15492984|15492984|15492984 15493310|15493310|15493310 3R + 15493130 15493161 3'utr CG5205 FlyBase G43108.1 GCGTATTTATTGTGTGATCCTCCAAGACATGT 11 15493141 0.915054294 4 9 103 0.857142857 0.602059991 0.142857143 0.181818182 0.357142857 11 0 2 12 3R:15493130-15493161 6 CG5205 FBtr0083147|FBtr0083147|FBtr0083147 15492984|15492984|15492984 15493310|15493310|15493310 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 15493121 15493159 3'utr CG5205 FlyBase G32566.1 ACTGAACTTGCGTATTTATTGTGTGATCCTCCAAGACAT 11 15493142 0.971903474 5 10 94 0.944444444 1.230448921 0.166666667 0.454545455 0.666666667 11 1 0 17 3R:15493121-15493159 6 10.5 2743 FBgn0038344 937.8966667 16.18666667 24.77666667 0.011195263 0.648682043 0.42378582 1 0 0.5 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3R 15688239 15688245 + 3R_15688239_15688245_+ 0.369026027 0.410799384 0.389912705 0.029538254 pxb FBtr0334025|FBtr0083162 15687935|15687935 15690513|15688451 3R + 15688215 15688293 3'utr pxb FlyBase G43116.1 TATAGGTCTTAAGTGTTTTTCCAATGTGATTGCCAAATTCTACATTATAATACTAAACTTTATTGAAACCTGCAAAACT 28 15688245 0.958326109 6 28 235 1 1.591064607 0 0.321428571 0.512820513 28 0 0 39 3R:15688215-15688293 7 pxb FBtr0334025|FBtr0083162 15687935|15687935 15690513|15688451 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 15688209 15688293 3'utr pxb FlyBase G32574.1 AGAACTTATAGGTCTTAAGTGTTTTTCCAATGTGATTGCCAAATTCTACATTATAATACTAAACTTTATTGAAACCTGCAAAACT 28 15688245 0.855701666 6 27 250 0.951219512 1.113943352 0.024390244 0.321428571 0.536585366 28 0 2 39 3R:15688209-15688293 7 23.5 2744 FBgn0053207 527.4133333 20.74333333 31.55333333 0.044557084 1.132894103 0.744770759 -6 -6 -6 0.15 dme-bantam-3p 6mer2-7 GATCTC 3R 15798839 15798844 + 3R_15798839_15798844_+ 0.960989299 0.991849391 0.976419345 0.021821386 nsl1 FBtr0301732 15798480 15801925 3R + 15798807 15798860 stop_codon nsl1 FlyBase G43141.1 CGACAACGCCACCACAGTCCCTCCTCAACCTCGATCTCGGCACTGAGCGGCGCT 15 15798837 0.982812053 2 10 77 0.611111111 1.041392685 0.222222222 0.133333333 0.277777778 15 7 0 11 3R:15798807-15798860 6 nsl1 FBtr0301732 15798480 15801925 GATCTC 6mer2-7 dme-bantam-3p 3R + 15798807 15798855 3'utr nsl1 FlyBase G32593.1 CGACAACGCCACCACAGTCCCTCCTCAACCTCGATCTCGGCACTGAGCG 11 15798837 0.96037655 3 10 49 0.944444444 1.230448921 0.444444444 0.454545455 0.666666667 11 1 0 17 3R:15798807-15798855 6 12 2745 FBgn0262527 2734.32 54.57333333 83.61333333 0.00438866 0.219887613 0.14351778 2 2 2 0.15 dme-miR-1008-3p 6mer2-7 GCTGTG 3R 15799453 15799458 + 3R_15799453_15799458_+ 0.94161018 0.985692023 0.963651102 0.03117054 nsl1 FBtr0309860|FBtr0301732|FBtr0309859 15798861|15798480|15798861 15801925|15801925|15801220 3R + 15799400 15799465 3'utr nsl1 FlyBase G43144.1 CGATAAGGGAAAACATTCGTCAGATGAGTCAATGGAGCGCAAACTGAGCAATGGCTGTGTCGCATC 23 15799451 0.958667252 3 22 105 0.96 1.380211242 0.24 0.043478261 0.12 23 1 0 24 3R:15799400-15799465 6 nsl1 FBtr0309859|FBtr0309860|FBtr0301732 15798861|15798861|15798480 15801220|15801925|15801925 GCTGTG 6mer2-7 dme-miR-1008-3p 3R + 15799417 15799464 3'utr nsl1 FlyBase G32595.1 CGTCAGATGAGTCAATGGAGCGCAAACTGAGCAATGGCTGTGTCGCAT 13 15799451 0.967094614 3 11 59 0.777777778 0.84509804 0.166666667 0.307692308 0.5 13 3 1 14 3R:15799417-15799464 6 16.5 2746 FBgn0262527 2734.32 54.57333333 83.61333333 0.006034407 0.302345468 0.197336948 2 2 2 0.15 dme-miR-79-3p 7mer-A1 AGCTTTA 3R 15800876 15800882 + 3R_15800876_15800882_+ 0.442524603 0.498573358 0.47054898 0.039632487 nsl1 FBtr0309860|FBtr0301732|FBtr0309859 15798861|15798480|15798861 15801925|15801925|15801220 3R + 15800849 15800899 3'utr nsl1 FlyBase G43149.1 AGCCGTCGACACCAGATGTCGAGCATGAGCTTTACGACTCGGCGATCGATG 10 15800874 0.954359407 5 10 47 1 1.079181246 0.333333333 0.2 0.333333333 10 0 0 12 3R:15800849-15800899 7 nsl1 FBtr0309859|FBtr0309860|FBtr0301732 15798861|15798861|15798480 15801220|15801925|15801925 AGCTTTA 7mer-A1 dme-miR-79-3p 3R + 15800851 15800893 3'utr nsl1 FlyBase G32598.1 CCGTCGACACCAGATGTCGAGCATGAGCTTTACGACTCGGCGA 8 15800879 0.741676947 3 8 32 1 1 0.4 0.25 0.4 8 0 0 10 3R:15800851-15800893 7 7.5 2747 FBgn0262527 2734.32 54.57333333 83.61333333 0.002742912 0.137429758 0.089698613 2 -3 -0.5 0.15 dme-miR-14-3p 6mer3-8 AAGACT 3R 15801049 15801054 + 3R_15801049_15801054_+ 0.966200305 0.885063464 0.925631885 0.057372381 nsl1 FBtr0309860|FBtr0301732|FBtr0301726|FBtr0334592|FBtr0309863|FBtr0309862|FBtr0301727|FBtr0309859|FBtr0309861|FBtr0301731|FBtr0301728|FBtr0301730 15798861|15798480|15801020|15801020|15801020|15801020|15801020|15798861|15801020|15801020|15801020|15801020 15801925|15801925|15801220|15802102|15801925|15801220|15801925|15801220|15801220|15801925|15801925|15801925 3R + 15801037 15801061 3'utr nsl1 FlyBase G43150.1 TTTTCGTTATTTAAGACTTTTAAAC 10 15801056 0.740047979 4 10 84 1 1.113943352 0 0.2 0.384615385 10 0 0 13 3R:15801037-15801061 6 nsl1 FBtr0301730|FBtr0309863|FBtr0309859|FBtr0309862|FBtr0309861|FBtr0301727|FBtr0301728|FBtr0301731|FBtr0309860|FBtr0301732|FBtr0301726|FBtr0334592 15801020|15801020|15798861|15801020|15801020|15801020|15801020|15801020|15798861|15798480|15801020|15801020 15801925|15801925|15801220|15801220|15801220|15801925|15801925|15801925|15801925|15801925|15801220|15802102 AAGACT 6mer3-8 dme-miR-14-3p 3R + 15801004 15801072 stop_codon nsl1 FlyBase G32599.1 CGCAGCAGACGCATCTAAGACCAAAATCCAAAGTTTTCGTTATTTAAGACTTTTAAACGATTTGTCAAT 14 15801056 0.984066557 4 14 110 1 1.342422681 0.181818182 0.357142857 0.590909091 14 0 0 22 3R:15801004-15801072 6 10.5 2748 FBgn0262527 2734.32 54.57333333 83.61333333 0.003840077 0.192401661 0.125578058 -7 -7 -7 0.15 dme-miR-14-3p 7mer-A1 AGACTGA 3R 15823606 15823612 + 3R_15823606_15823612_+ 0.823289077 0.82333412 0.823311599 3.18E-05 alpha-Man-IIb FBtr0083179|FBtr0345238|FBtr0334593 15822936|15822936|15822936 15824118|15824118|15824118 3R + 15823585 15823628 3'utr alpha-Man-IIb FlyBase G43158.1 AGCGTTCGCATCGATTTGTTTAGACTGATTAGCCTAAAACGATT 68 15823604 0.730388281 8 68 633 1 1.86332286 0.150684932 0.073529412 0.136986301 68 0 0 73 3R:15823585-15823628 7 alpha-Man-IIb FBtr0334593|FBtr0345238|FBtr0083179 15822936|15822936|15822936 15824118|15824118|15824118 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 15823585 15823626 3'utr alpha-Man-IIb FlyBase G32605.1 AGCGTTCGCATCGATTTGTTTAGACTGATTAGCCTAAAACGA 43 15823604 0.707266663 6 42 397 0.986111111 1.851258349 0.236111111 0.372093023 0.625 43 1 0 71 3R:15823585-15823626 7 55.5 2749 FBgn0026616 98.7 2.216666667 3.413333333 0.56231003 25.03759398 16.25976563 2 2 2 0.15 dme-bantam-3p 7mer-m8 TGATCTC 3R 15844299 15844305 + 3R_15844299_15844305_+ 0.661213282 0.661614079 0.66141368 0.000283408 spn-E FBtr0083183 15844105 15844415 3R + 15844281 15844330 3'utr spn-E FlyBase G43165.1 TTTCTATGTTATGTTGAATGATCTCTCTTCGTTCAATTACGAAGTGTAAA 23 15844299 0.823496831 4 22 270 0.961538462 1.397940009 0.153846154 0.130434783 0.230769231 23 1 0 25 3R:15844281-15844330 7 spn-E FBtr0083183 15844105 15844415 TGATCTC 7mer-m8 dme-bantam-3p 3R + 15844286 15844332 3'utr spn-E FlyBase G32609.1 ATGTTATGTTGAATGATCTCTCTTCGTTCAATTACGAAGTGTAAAAT 21 15844298 0.747508333 6 19 227 0.964285714 1.130333768 0.178571429 0.333333333 0.5 21 0 1 27 3R:15844286-15844332 7 21.5 2750 FBgn0003483 512.23 13.13666667 20.07333333 0.041973332 1.636640447 1.071072733 0 1 0.5 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3R 15854046 15854052 - 3R_15854046_15854052_- 0.441650554 0.44309755 0.442374052 0.001023113 Hmt-1 FBtr0083188 15853866 15854095 3R - 15853964 15854083 3'utr Hmt-1 FlyBase G51626.1 TACAGAGTAGTTTCTGATATTCCTGATTCCATGTGATTTGTGGTGTATTGTTATACGTATGAGAGCAGCTCGTCAAAGTCTTAGTTCGTCTATAAGTAACCTTATATGCTACTCTTATAC 111 15854046 0.990448997 15 109 1111 0.986013986 1.672097858 0.111888112 0.207207207 0.384615385 111 0 2 141 3R:15853964-15854083 7 Hmt-1 FBtr0083188 15853866 15854095 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 15853988 15854085 3'utr Hmt-1 FlyBase G39001.1 CATACAGAGTAGTTTCTGATATTCCTGATTCCATGTGATTTGTGGTGTATTGTTATACGTATGAGAGCAGCTCGTCAAAGTCTTAGTTCGTCTATAAG 82 15854046 0.989547903 14 81 786 0.992307692 2.11058971 0.161538462 0.402439024 0.623076923 82 1 0 129 3R:15853988-15854085 7 85.5 2751 FBgn0038376 648.03 26.12666667 39.84666667 0.131938336 3.2725185 2.14572528 -6 -6 -6 0.15 dme-miR-305-5p 8mer-A1 AGTACAAA 3R 15934698 15934705 + 3R_15934698_15934705_+ 0.605001798 0.467038605 0.536020201 0.097554714 blp FBtr0345214|FBtr0083203 15934636|15934636 15934940|15934940 3R + 15934644 15934741 3'utr blp FlyBase G43172.1 TTGTTGTCCCAATCGAACTAATTAGCTGATAATTGATTTAAAAACTACGTGTTAAGTACAAAAAATGAAAGTCTGTTGCTGTAAATAGAGATTTACGA 33 15934720 0.724706292 9 31 204 0.948717949 1.568201724 0.384615385 0.121212121 0.256410256 33 2 0 37 3R:15934644-15934741 8 blp FBtr0345214|FBtr0083203 15934636|15934636 15934940|15934940 AGTACAAA 8mer-A1 dme-miR-305-5p 3R + 15934645 15934734 3'utr blp FlyBase G32614.1 TGTTGTCCCAATCGAACTAATTAGCTGATAATTGATTTAAAAACTACGTGTTAAGTACAAAAAATGAAAGTCTGTTGCTGTAAATAGAGA 34 15934719 0.736941988 9 33 206 0.946428571 1.72427587 0.321428571 0.470588235 0.678571429 34 3 0 53 3R:15934645-15934734 8 22.5 2752 FBgn0038387 172.3333333 22.73666667 34.87666667 0.130560928 0.989590969 0.64513046 -22 -21 -21.5 0.15 dme-miR-304-5p 7mer-m8 TGAGATT 3R 15962371 15962377 - 3R_15962371_15962377_- 0.620203354 0.62017228 0.620187817 2.20E-05 CG4287 FBtr0083240|FBtr0301716 15962165|15962165 15962537|15962537 3R - 15962350 15962394 3'utr CG4287 FlyBase G51636.1 AAATATGGGGACACCTATGAGATTTACAGATTTTAGTCAATTGCA 22 15962377 0.747213711 4 21 147 0.964285714 1.431363764 0.25 0.227272727 0.392857143 22 1 0 27 3R:15962350-15962394 7 CG4287 FBtr0083240|FBtr0301716 15962165|15962165 15962537|15962537 TGAGATT 7mer-m8 dme-miR-304-5p 3R - 15962349 15962390 3'utr CG4287 FlyBase G39008.1 ATGGGGACACCTATGAGATTTACAGATTTTAGTCAATTGCAA 9 15962377 0.812112578 4 9 59 1 1.176091259 0.4 0.333333333 0.6 9 0 0 15 3R:15962349-15962390 7 15.5 2753 FBgn0038388 224 16.66 25.57666667 0.069196429 0.930372149 0.606021113 0 0 0 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 3R 15962460 15962465 - 3R_15962460_15962465_- 0.966718843 0.976241896 0.97148037 0.006733849 CG4287 FBtr0083240|FBtr0301716 15962165|15962165 15962537|15962537 3R - 15962442 15962481 3'utr CG4287 FlyBase G51637.1 GAAAAATCATTGAAATTGTGTTACTAGCCGTAAGCAAAGC 89 15962466 0.754509994 6 81 707 0.900990099 1.356981401 0.059405941 0.078651685 0.188118812 89 7 3 91 3R:15962442-15962481 6 CG4287 FBtr0083240|FBtr0301716 15962165|15962165 15962537|15962537 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 15962440 15962478 3'utr CG4287 FlyBase G39010.1 AAATCATTGAAATTGTGTTACTAGCCGTAAGCAAAGCGA 49 15962466 0.74753803 6 45 386 0.945945946 1.367976785 0.040540541 0.367346939 0.581081081 49 2 2 70 3R:15962440-15962478 6 69 2754 FBgn0038388 224 16.66 25.57666667 0.308035714 4.141656663 2.697771406 1 1 1 0.15 dme-miR-276a-3p 6mer2-7 GTTCCT 3R 15983389 15983394 + 3R_15983389_15983394_+ 0.999537382 0.99908284 0.999310111 0.000321451 Hel89B FBtr0344471|FBtr0301715 15983324|15983324 15983451|15983451 3R + 15983359 15983431 3'utr Hel89B FlyBase G43231.1 AGGCTACGTTGATCATTTATATTGCCCTCTGTTCCTTTATAATCGCGAAAAGAAACTTTTAGAAATAAATATT 28 15983397 0.982343886 9 28 210 1 1.51851394 0.212121212 0.142857143 0.272727273 28 0 0 33 3R:15983359-15983431 6 Hel89B FBtr0344471|FBtr0301715 15983324|15983324 15983451|15983451 GTTCCT 6mer2-7 dme-miR-276a-3p 3R + 15983348 15983428 3'utr Hel89B FlyBase G32657.1 CTTCCAGTTTTAGGCTACGTTGATCATTTATATTGCCCTCTGTTCCTTTATAATCGCGAAAAGAAACTTTTAGAAATAAAT 25 15983398 0.914708736 10 22 204 0.914285714 1.204119983 0.342857143 0.32 0.514285714 25 2 1 32 3R:15983348-15983428 6 17 2755 FBgn0022787 1806.236667 33.54666667 51.41 0.009411834 0.506756757 0.330674966 -8 -9 -8.5 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 16003563 16003569 + 3R_16003563_16003569_+ 0.478638267 0.512250544 0.495444406 0.023767415 srp FBtr0335424 16003135 16004081 3R + 16003393 16003610 stop_codon srp FlyBase G43262.1 CAGCTGCAGCAGCAGACTGCCGCCCTCTTGGGTCAACATGAGCAGCATGTGACCAACTATGCGATGCATAAGTTCGGCGTTGACCGGGAAACAGTGGTGAAGATGGAGTAGGCGCGACACGCTGTATGTCGCACGACCAAAGATTCTGTTGTTACATTAATCTCATAGCTCCAAAGAATTTATAGCCTGTATACCAAGAGCAGTTCTCAAAGAACACT 531 16003549 0.855615541 36 497 3843 0.937791602 2.002166062 0.077760498 0.175141243 0.31881804 531 35 5 603 3R:16003393-16003610 7 srp FBtr0335424 16003135 16004081 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 16003379 16003671 stop_codon srp FlyBase G32683.2 AGCAGCAGCAGCAACAGCTGCAGCAGCAGACTGCCGCCCTCTTGGGTCAACATGAGCAGCATGTGACCAACTATGCGATGCATAAGTTCGGCGTTGACCGGGAAACAGTGGTGAAGATGGAGTAGGCGCGACACGCTGTATGTCGCACGACCAAAGATTCTGTTGTTACATTAATCTCATAGCTCCAAAGAATTTATAGCCTGTATACCAAGAGCAGTTCTCAAAGAACACTCATCTATCTAAAATCTATCGAATCATTAGTTGTACATACGGTCTAAATCGATTGATACTTA 337 16003549 0.9723129 41 313 2355 0.94 1.769007871 0.12 0.367952522 0.574 337 23 7 470 3R:16003379-16003671 7 262.5 2756 FBgn0003507 2528.6 69.84666667 106.7833333 0.103812386 3.758232318 2.45824879 14 14 14 0.15 dme-miR-92b-3p 7mer-m1 TGCAATT 3R 16003938 16003944 + 3R_16003938_16003944_+ 0.765444328 0.765586663 0.765515496 0.000100692 srp FBtr0335424 16003135 16004081 3R + 16003614 16003963 3'utr srp FlyBase G43262.2 CTATCTAAAATCTATCGAATCATTAGTTGTACATACGGTCTAAATCGATTGATACTTACATTTTCGTCGAATTTTAATGGTCCACTACTCGAAATTTGTTATGAAATACTAGTTTAATTGTTAGCAAAATGCCAACAGCATAAAATCGATTCAGAAACTAGGCTAAGAATGTTCATTTAAAATTTTGTTATCAAATCGAATACCTTTTGAGATTTCCTACAATCAAATTCCACTTAGATATTAGCCACAAATCATAGTTAAGTCAACCAAAAAAAGGCAAATGAAAACGAAAAAGAATAACAATCGAAGTAACCAATAATCTCATGCAATTAGCTATTAATTTATATATT 365 16003930 0.999999402 54 346 2252 0.966442953 2.033423755 0.089485459 0.175342466 0.326621924 365 12 3 432 3R:16003614-16003963 7 srp FBtr0335424 16003135 16004081 TGCAATT 7mer-m1 dme-miR-92b-3p 3R + 16003715 16003963 3'utr srp FlyBase G32683.4 TGAAATACTAGTTTAATTGTTAGCAAAATGCCAACAGCATAAAATCGATTCAGAAACTAGGCTAAGAATGTTCATTTAAAATTTTGTTATCAAATCGAATACCTTTTGAGATTTCCTACAATCAAATTCCACTTAGATATTAGCCACAAATCATAGTTAAGTCAACCAAAAAAAGGCAAATGAAAACGAAAAAGAATAACAATCGAAGTAACCAATAATCTCATGCAATTAGCTATTAATTTATATATT 285 16003938 0.975782655 30 275 1584 0.964370546 2.608526034 0.087885986 0.343859649 0.555819477 285 15 0 406 3R:16003715-16003963 7 216.5 2757 FBgn0003507 2528.6 69.84666667 106.7833333 0.085620501 3.099646845 2.027469955 8 0 4 0.15 dme-miR-278-3p 6mer3-8 CCCACC 3R 16040803 16040808 + 3R_16040803_16040808_+ 0.999309191 0.999959711 0.999634451 0.000459973 pnr FBtr0083220|FBtr0335426|FBtr0083221|FBtr0335427 16040311|16040311|16040311|16040311 16040915|16041796|16040915|16041796 3R + 16040776 16040917 3'utr pnr FlyBase G43285.1 AAATATTTTATGAGTATTCCGCACTTCCCCACCAACCCACTTAATAGAACATTTAGCAGTTAGTCCTATGTAGAAGTCTAGAATTAATATCGTAGCTCTGATCCATTTAATATGAACGCTAAATAAAGATTGTATTAAACTA 63 16040800 0.815148863 20 59 420 0.93902439 1.187520721 0.036585366 0.238095238 0.414634146 63 1 4 77 3R:16040776-16040917 6 pnr FBtr0083221|FBtr0335427|FBtr0083220|FBtr0335426 16040311|16040311|16040311|16040311 16040915|16041796|16040915|16041796 CCCACC 6mer3-8 dme-miR-278-3p 3R + 16040780 16040916 3'utr pnr FlyBase G32705.1 ATTTTATGAGTATTCCGCACTTCCCCACCAACCCACTTAATAGAACATTTAGCAGTTAGTCCTATGTAGAAGTCTAGAATTAATATCGTAGCTCTGATCCATTTAATATGAACGCTAAATAAAGATTGTATTAAACT 58 16040800 0.772440948 24 51 373 0.870588235 1.86923172 0.094117647 0.344827586 0.552941176 58 11 0 74 3R:16040780-16040916 6 17.5 2758 FBgn0003117 3353.65 145.2033333 222.1433333 0.005218195 0.120520649 0.078777966 3 3 3 0.15 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 16046449 16046456 - 3R_16046449_16046456_- 0.624843643 0.624350853 0.624597248 0.000348392 ird5 FBtr0304804 16046345 16046579 3R - 16046408 16046484 3'utr ird5 FlyBase G51670.1 TTTGTTATTGCCCGCTTATCCAATTAATTAGCTTTATTAGTTTCATAGAATCTTTAATGTTCTCATTTGGAAACGTT 228 16046457 0.836164252 14 219 2868 0.964143426 2.383815366 0.067729084 0.087719298 0.171314741 228 9 0 242 3R:16046408-16046484 8 ird5 FBtr0304804 16046345 16046579 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R - 16046410 16046471 3'utr ird5 FlyBase G39032.1 GCTTATCCAATTAATTAGCTTTATTAGTTTCATAGAATCTTTAATGTTCTCATTTGGAAACG 141 16046457 0.8355184 10 136 1738 0.954545455 2.276461804 0.060606061 0.290780142 0.494949495 141 9 0 189 3R:16046410-16046471 8 164 2759 FBgn0024222 780.2833333 38.32666667 59.02333333 0.210180063 4.279005044 2.778562151 1 1 1 0.15 dme-miR-304-5p 8mer-A1 TGAGATTA 3R 16060192 16060199 + 3R_16060192_16060199_+ 0.621850821 0.620887833 0.621369327 0.000680944 msps FBtr0301479|FBtr0304803|FBtr0304802|FBtr0301480|FBtr0304801 16059818|16059818|16059818|16059818|16059818 16060675|16060675|16060675|16060675|16060675 3R + 16060162 16060255 3'utr msps FlyBase G43320.1 TGCGATTCAATAAGATTCGATTGGCTGAGTTGAGATTAAAGTGGCGACTGTGACTGAGACCGGGTTCCATTAGACAGCTTGTTAGTTTATGCCT 70 16060191 0.974911574 11 69 456 0.988372093 1.929418926 0.255813953 0.171428571 0.325581395 70 1 0 85 3R:16060162-16060255 8 msps FBtr0304803|FBtr0304802|FBtr0301480|FBtr0304801|FBtr0301479 16059818|16059818|16059818|16059818|16059818 16060675|16060675|16060675|16060675|16060675 TGAGATTA 8mer-A1 dme-miR-304-5p 3R + 16060152 16060256 3'utr msps FlyBase G32731.2 GTGTTTCGTATGCGATTCAATAAGATTCGATTGGCTGAGTTGAGATTAAAGTGGCGACTGTGACTGAGACCGGGTTCCATTAGACAGCTTGTTAGTTTATGCCTA 56 16060191 0.980019838 12 54 360 0.952941176 1.908485019 0.2 0.303571429 0.541176471 56 4 0 81 3R:16060152-16060256 8 34.5 2760 FBgn0027948 3925.543333 64.62 99.02333333 0.008788592 0.533890436 0.348402733 1 1 1 0.15 dme-miR-932-5p 7mer-A1 GAATTGA 3R 16103308 16103314 + 3R_16103308_16103314_+ 0.75660406 0.793186478 0.774895269 0.025867663 Akt1 FBtr0344717|FBtr0083228|FBtr0083226|FBtr0344470|FBtr0083227 16103113|16103113|16103113|16103113|16103113 16105670|16104515|16104515|16104515|16104515 3R + 16103240 16103330 3'utr Akt1 FlyBase G43341.1 ATACCATGATAACGAAGGCAAGCAAAGGGTTTTCTTGCTAGTTTATATACACCAATAATAAGAGAATTGAATTGATAGTAACTTATTTTTG 21 16103306 0.986393958 7 18 153 0.884615385 1.361727836 0.230769231 0.238095238 0.384615385 21 3 0 23 3R:16103240-16103330 7 Akt1 FBtr0083227|FBtr0344717|FBtr0083228|FBtr0083226|FBtr0344470 16103113|16103113|16103113|16103113|16103113 16104515|16105670|16104515|16104515|16104515 GAATTGA 7mer-A1 dme-miR-932-5p 3R + 16103284 16103328 3'utr Akt1 FlyBase G32751.1 ATATACACCAATAATAAGAGAATTGAATTGATAGTAACTTATTTT 16 16103306 0.984172648 5 14 113 0.869565217 1.301029996 0.130434783 0.3125 0.52173913 16 3 0 20 3R:16103284-16103328 7 15.5 2761 FBgn0010379 3175.29 102.15 156.83 0.004881444 0.151737641 0.098833131 2 2 2 0.15 dme-miR-305-3p 6mer3-8 ATGTGC 3R 16103822 16103827 + 3R_16103822_16103827_+ 0.527574767 0.53491512 0.531244943 0.005190376 Akt1 FBtr0344717|FBtr0083228|FBtr0083226|FBtr0344470|FBtr0083227 16103113|16103113|16103113|16103113|16103113 16105670|16104515|16104515|16104515|16104515 3R + 16103792 16103846 3'utr Akt1 FlyBase G43344.1 AAGTTATATATAATGTTAAAATTGCCTCTAATGTGCTGTGCTTTATGCAAAACTA 23 16103823 0.988760011 5 23 222 1 1.414973348 0.076923077 0.130434783 0.230769231 23 0 0 26 3R:16103792-16103846 6 Akt1 FBtr0083227|FBtr0344717|FBtr0083228|FBtr0083226|FBtr0344470 16103113|16103113|16103113|16103113|16103113 16104515|16105670|16104515|16104515|16104515 ATGTGC 6mer3-8 dme-miR-305-3p 3R + 16103810 16103846 3'utr Akt1 FlyBase G32753.1 AAATTGCCTCTAATGTGCTGTGCTTTATGCAAAACTA 18 16103823 0.770886143 4 15 151 0.807692308 1.021189299 0.115384615 0.444444444 0.615384615 18 4 1 21 3R:16103810-16103846 6 19.5 2762 FBgn0010379 3175.29 102.15 156.83 0.006141171 0.190895742 0.124338456 -1 -1 -1 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 16149241 16149247 + 3R_16149241_16149247_+ 0.661516153 0.661587899 0.661552026 5.07E-05 CG5916 FBtr0083251|FBtr0344009 16148765|16148765 16149389|16149636 3R + 16149221 16149273 3'utr CG5916 FlyBase G43359.1 TTACCCAACAACAAACATTTTGTGTTCTAAGTTATCTTGTTGATCAAAGAAGT 17 16149240 0.707334732 4 17 149 1 1.342422681 0.136363636 0.176470588 0.363636364 17 0 0 22 3R:16149221-16149273 7 CG5916 FBtr0083251|FBtr0344009 16148765|16148765 16149389|16149636 TGTGTTC 7mer-m8 dme-miR-317-3p 3R + 16149222 16149282 3'utr CG5916 FlyBase G32761.1 TACCCAACAACAAACATTTTGTGTTCTAAGTTATCTTGTTGATCAAAGAAGTATTTATTTT 17 16149240 0.98841743 6 16 152 0.96 1.380211242 0.48 0.352941176 0.56 17 1 0 24 3R:16149222-16149282 7 13.5 2763 FBgn0038401 127.6666667 7.303333333 11.36 0.105744125 1.848471018 1.188380282 1 1 1 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3R 16197053 16197059 + 3R_16197053_16197059_+ 0.521223279 0.520810009 0.521016644 0.000292247 sra FBtr0344473|FBtr0083255 16196914|16196914 16197584|16197584 3R + 16196927 16197076 3'utr sra FlyBase G43368.1 TGACGAAACTAAAGCTGAAAACCTGAGTTGTAAAACCAAACGATCGGGACAACGGGTTGGGACTCATGCTCTGCGGATGGTTGGGGCTTCGATTGAGTATTTTTTGTAAATATTTTCCGATTCAATTGTGATTAATTTACACATACATAT 91 16197052 0.822085075 21 87 770 0.964285714 1.431363764 0.026785714 0.208791209 0.357142857 91 1 3 108 3R:16196927-16197076 7 sra FBtr0344473|FBtr0083255 16196914|16196914 16197584|16197584 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 16196927 16197073 3'utr sra FlyBase G32768.1 TGACGAAACTAAAGCTGAAAACCTGAGTTGTAAAACCAAACGATCGGGACAACGGGTTGGGACTCATGCTCTGCGGATGGTTGGGGCTTCGATTGAGTATTTTTTGTAAATATTTTCCGATTCAATTGTGATTAATTTACACATACA 48 16197052 0.987946693 15 47 421 0.971428571 1.832508913 0.028571429 0.375 0.571428571 48 2 0 68 3R:16196927-16197073 7 54 2764 FBgn0086370 863.5966667 56.39333333 86.18 0.06252919 0.957559995 0.626595498 1 1 1 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 16197311 16197316 + 3R_16197311_16197316_+ 0.894298413 0.832543774 0.863421093 0.043667096 sra FBtr0344473|FBtr0083255 16196914|16196914 16197584|16197584 3R + 16197258 16197343 3'utr sra FlyBase G43369.1 TTGATGTTAAGCCATCGCAAATACCTGCTAACAATATCTACATATATCTCTGTGTACCTTCGACGGGAAATCGCTGACAGAGGCGC 58 16197310 0.966375201 5 56 377 0.972972973 1.556302501 0.189189189 0.224137931 0.391891892 58 1 1 72 3R:16197258-16197343 6 sra FBtr0344473|FBtr0083255 16196914|16196914 16197584|16197584 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 16197257 16197333 3'utr sra FlyBase G32769.1 ATTGATGTTAAGCCATCGCAAATACCTGCTAACAATATCTACATATATCTCTGTGTACCTTCGACGGGAAATCGCTG 33 16197310 0.978098323 3 30 210 0.925 1.091080469 0.225 0.212121212 0.35 33 1 2 37 3R:16197257-16197333 6 38 2765 FBgn0086370 863.5966667 56.39333333 86.18 0.044002023 0.673838515 0.440937573 1 1 1 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 16197550 16197555 + 3R_16197550_16197555_+ 0.999527006 0.99599567 0.997761338 0.002497006 sra FBtr0344473|FBtr0083255 16196914|16196914 16197584|16197584 3R + 16197520 16197566 3'utr sra FlyBase G43370.1 TTCAAATTCGAAATGAATGTTCTCAAATGTACCAAACAAAACAAAAT 26 16197537 0.967535914 3 25 142 1 1.51851394 0.363636364 0.24 0.424242424 25 0 0 33 3R:16197520-16197566 6 sra FBtr0344473|FBtr0083255 16196914|16196914 16197584|16197584 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 16197483 16197567 3'utr sra FlyBase G32770.1 ATGCCTACGTGTAGTTAAAATTTAAATTGAAAATATATTCAAATTCGAAATGAATGTTCTCAAATGTACCAAACAAAACAAAATG 23 16197537 0.968053673 7 22 129 1 1.544068044 0.428571429 0.454545455 0.657142857 22 0 0 35 3R:16197483-16197567 6 12 2766 FBgn0086370 863.5966667 56.39333333 86.18 0.013895376 0.21279111 0.139243444 13 13 13 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 3R 16204221 16204226 - 3R_16204221_16204226_- 0.964124397 0.915209638 0.939667017 0.034587987 mtSSB FBtr0083277 16204192 16204313 3R - 16204200 16204294 3'utr mtSSB FlyBase G51704.1 AAACCTAATCTTAAGCGAAAAGTTGAACTTGCAGCATTGTAAGCATTTATAATATTCGTTGGATATATTGTGTTATCAGATTACATGCGTAGTCG 38 16204227 0.812079653 9 37 358 0.980769231 1.40654018 0.230769231 0.263157895 0.461538462 38 0 1 51 3R:16204200-16204294 6 mtSSB FBtr0083277 16204192 16204313 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 16204200 16204240 3'utr mtSSB FlyBase G39055.1 TTCGTTGGATATATTGTGTTATCAGATTACATGCGTAGTCG 21 16204227 0.754854867 3 20 223 0.964285714 1.431363764 0.357142857 0.238095238 0.428571429 21 1 0 27 3R:16204200-16204240 6 25 2767 FBgn0010438 497.9633333 116.1266667 178.4933333 0.0502045 0.215282163 0.140061253 1 1 1 0.15 dme-miR-92b-3p 6mer2-7 TGCAAT 3R 16259765 16259770 + 3R_16259765_16259770_+ 0.999999987 0.943732105 0.971866046 0.039787414 tara FBtr0083257|FBtr0083258 16259503|16259503 16260329|16260329 3R + 16259689 16259773 3'utr tara FlyBase G43390.1 CATATATTCGAAAGTCTTGGTCCTAAATACCCCTCTCCCCCTTCCTTCACACAAGCAATCGGGGACACAAATTAATTGCAATCTT 11 16259747 0.953275099 8 11 54 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 3R:16259689-16259773 6 tara FBtr0083257|FBtr0083258 16259503|16259503 16260329|16260329 TGCAAT 6mer2-7 dme-miR-92b-3p 3R + 16259737 16259773 3'utr tara FlyBase G32783.2 ACACAAGCAATCGGGGACACAAATTAATTGCAATCTT 5 16259760 0.81511877 3 3 19 0.777777778 0.84509804 0 0.2 0.555555556 5 2 0 7 3R:16259737-16259773 6 3.5 2768 FBgn0040071 436.6666667 12.95666667 19.84666667 0.008015267 0.270131207 0.176352032 18 5 11.5 0.15 dme-miR-1003-3p 7mer-m8 ATGTGAG 3R 16261385 16261391 - 3R_16261385_16261391_- 0.671796207 0.671796192 0.6717962 0 bor FBtr0305998|FBtr0083276 16261353|16261353 16261833|16261833 3R - 16261380 16261442 3'utr bor FlyBase G51707.1 AACTTCTCGCTGGCTCTTCCACCAATTTCACTTGTCCGCAGTGTTTCCTATATGTGAGTATGA 9 16261392 0.991699553 7 8 82 0.8125 1.113943352 0 0.333333333 0.625 9 3 0 13 3R:16261380-16261442 7 bor FBtr0305998|FBtr0083276 16261353|16261353 16261833|16261833 ATGTGAG 7mer-m8 dme-miR-1003-3p 3R - 16261376 16261413 3'utr bor FlyBase G39057.1 ACTTGTCCGCAGTGTTTCCTATATGTGAGTATGAAGTA 7 16261394 0.63094883 5 6 58 1 0.954242509 0.333333333 0.285714286 0.444444444 7 0 0 9 3R:16261376-16261413 7 6 2769 FBgn0040237 972.07 49.02666667 75.33333333 0.006172395 0.122382377 0.079646018 1 3 2 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 16261629 16261635 - 3R_16261629_16261635_- 0.659709977 0.660962981 0.660336479 0.000886005 bor FBtr0305998|FBtr0083276 16261353|16261353 16261833|16261833 3R - 16261599 16261653 3'utr bor FlyBase G51710.1 TAATCGTTGGCGGGAAGATGTGTTCGTCTATAGATACAATTAAGTTTGACCCACA 17 16261635 0.981362043 6 17 122 1 1.255272505 0.222222222 0.058823529 0.111111111 17 0 0 18 3R:16261599-16261653 7 bor FBtr0305998|FBtr0083276 16261353|16261353 16261833|16261833 TGTGTTC 7mer-m8 dme-miR-317-3p 3R - 16261614 16261657 3'utr bor FlyBase G39060.1 TACATAATCGTTGGCGGGAAGATGTGTTCGTCTATAGATACAAT 17 16261635 0.875882511 3 16 126 0.961538462 1.397940009 0.461538462 0.411764706 0.615384615 17 1 0 25 3R:16261614-16261657 7 16 2770 FBgn0040237 972.07 49.02666667 75.33333333 0.01645972 0.326353005 0.212389381 0 0 0 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 16266854 16266859 + 3R_16266854_16266859_+ 0.939758179 0.748359914 0.844059046 0.135339036 asun FBtr0083259 16266545 16266891 3R + 16266834 16266866 3'utr asun FlyBase G43394.1 TTTTTTTTAACTTGTGATTGTGATCTTTGGCAC 9 16266852 0.653972491 3 7 100 0.8 0.602059991 0.3 0.111111111 0.2 9 1 1 8 3R:16266834-16266866 6 asun FBtr0083259 16266545 16266891 TGATCT 6mer3-8 dme-bantam-3p 3R + 16266838 16266870 3'utr asun FlyBase G32785.1 TTTTAACTTGTGATTGTGATCTTTGGCACGGTA 6 16266853 0.67946575 4 6 59 1 0.903089987 0.25 0.333333333 0.5 6 0 0 8 3R:16266838-16266870 6 7.5 2771 FBgn0020407 250 12.17666667 18.69333333 0.03 0.615932111 0.401212553 2 1 1.5 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 16303469 16303475 + 3R_16303469_16303475_+ 0.658949291 0.658664544 0.658806917 0.000201384 gish FBtr0334606 16301873 16304768 3R + 16303447 16303492 3'utr gish FlyBase G43416.1 AGATATACAGTATGAATCAATAGGCAGCTTGGTTTAGCTCTGTTTT 20 16303467 0.936824512 2 19 151 0.961538462 1.397940009 0.076923077 0.25 0.423076923 20 1 0 25 3R:16303447-16303492 7 gish FBtr0334606 16301873 16304768 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 16303455 16303490 3'utr gish FlyBase G32809.1 AGTATGAATCAATAGGCAGCTTGGTTTAGCTCTGTT 19 16303467 0.930434057 2 19 123 1 1.361727836 0.043478261 0.157894737 0.304347826 19 0 0 23 3R:16303455-16303490 7 19.5 2772 FBgn0250823 3945.283333 157.2966667 241.69 0.004942611 0.123969569 0.080681865 2 2 2 0.15 dme-miR-14-3p 7mer-m8 AAGACTG 3R 16311066 16311072 - 3R_16311066_16311072_- 0.526722494 0.554626353 0.540674424 0.019731037 Sulf1 FBtr0334699|FBtr0083273|FBtr0334700 16310540|16310540|16310540 16311180|16311180|16311180 3R - 16311047 16311155 3'utr Sulf1 FlyBase G51728.1 ACATATCCAATGCGTATCCTTTGTACCTTGCTTGCCCGCTTCTAATCTTTGGTTTGCCCCATTTAATGTTTTCATACATAAATAAGACTGTGTTTTAATCTATATTCGT 126 16311064 0.688923571 17 117 1143 0.939189189 2.1430148 0.27027027 0.134920635 0.263513514 126 9 0 139 3R:16311047-16311155 7 Sulf1 FBtr0334700|FBtr0083273|FBtr0334699 16310540|16310540|16310540 16311180|16311180|16311180 AAGACTG 7mer-m8 dme-miR-14-3p 3R - 16311048 16311091 3'utr Sulf1 FlyBase G39072.1 AATGTTTTCATACATAAATAAGACTGTGTTTTAATCTATATTCG 62 16311064 0.651622545 8 56 492 0.896551724 1.591064607 0.022988506 0.322580645 0.517241379 62 8 1 78 3R:16311048-16311091 7 63 2773 FBgn0040271 314.1 7.876666667 12.08 0.200573066 7.998307237 5.215231788 -8 -8 -8 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 16311128 16311133 - 3R_16311128_16311133_- 0.998569058 0.990757438 0.994663248 0.005523706 Sulf1 FBtr0334699|FBtr0083273|FBtr0334700 16310540|16310540|16310540 16311180|16311180|16311180 3R - 16311047 16311155 3'utr Sulf1 FlyBase G51728.1 ACATATCCAATGCGTATCCTTTGTACCTTGCTTGCCCGCTTCTAATCTTTGGTTTGCCCCATTTAATGTTTTCATACATAAATAAGACTGTGTTTTAATCTATATTCGT 126 16311134 0.688923571 17 117 1143 0.939189189 2.1430148 0.27027027 0.134920635 0.263513514 126 9 0 139 3R:16311047-16311155 6 Sulf1 FBtr0334700|FBtr0083273|FBtr0334699 16310540|16310540|16310540 16311180|16311180|16311180 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 16311105 16311152 3'utr Sulf1 FlyBase G39073.1 TATCCAATGCGTATCCTTTGTACCTTGCTTGCCCGCTTCTAATCTTTG 30 16311134 0.659523187 7 28 303 0.936170213 1.643452676 0.574468085 0.466666667 0.659574468 30 3 0 44 3R:16311105-16311152 6 45.5 2774 FBgn0040271 314.1 7.876666667 12.08 0.144858325 5.776555226 3.766556291 1 1 1 0.15 dme-miR-317-5p 6mer3-8 GTATCC 3R 16345443 16345448 + 3R_16345443_16345448_+ 0.986423633 0.993417282 0.989920457 0.004945293 pad FBtr0301514 16345403 16345829 3R + 16345407 16345551 3'utr pad FlyBase G43431.1 AGTCCTTAAGCTCGAAAAGTGAATCCACCTTACCTCGTATCCTAGTCCGCGGTCTATTCCAACATCTGGTCGCCAGTTCCTTGTATTGTATAGTTTTCGGTAAATTTTCCTTTTAATTTTCTTTGTGCAATATTATTTATAGCAA 66 16345446 0.844306844 20 61 588 0.906666667 1.531478917 0.066666667 0.136363636 0.24 66 6 1 68 3R:16345407-16345551 6 pad FBtr0301514 16345403 16345829 GTATCC 6mer3-8 dme-miR-317-5p 3R + 16345398 16345464 stop_codon pad FlyBase G32816.1 AAAGTAATTAGTCCTTAAGCTCGAAAAGTGAATCCACCTTACCTCGTATCCTAGTCCGCGGTCTATT 27 16345445 0.986547304 9 24 177 0.861111111 1.491361694 0.027777778 0.259259259 0.444444444 27 5 0 31 3R:16345398-16345464 6 25.5 2775 FBgn0038418 118 4.38 6.753333333 0.216101695 5.821917808 3.775913129 -3 -2 -2.5 0.15 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 16345740 16345745 + 3R_16345740_16345745_+ 0.748012272 0.727660927 0.737836599 0.014390613 pad FBtr0301514 16345403 16345829 3R + 16345708 16345812 3'utr pad FlyBase G43432.1 GTAAATATCTGTGTATCTATTATGTATGTACAAGCTGTAGCTGTAAACAATGGTAAAAATACCTTTTTTGGGTGAAGAAAATGATTCCATTGCAAAAATAAATAT 34 16345743 0.967865666 6 33 186 1 1.602059991 0.15 0.117647059 0.25 34 0 0 40 3R:16345708-16345812 6 pad FBtr0301514 16345403 16345829 AGCTGT 6mer3-8 dme-miR-1008-3p 3R + 16345729 16345803 3'utr pad FlyBase G32818.2 ATGTATGTACAAGCTGTAGCTGTAAACAATGGTAAAAATACCTTTTTTGGGTGAAGAAAATGATTCCATTGCAAA 26 16345743 0.976712977 4 23 133 0.930232558 1.124938737 0.069767442 0.461538462 0.674418605 26 1 2 40 3R:16345729-16345803 6 25 2776 FBgn0038418 118 4.38 6.753333333 0.211864407 5.707762557 3.701875617 -3 -3 -3 0.15 dme-miR-1006-3p 8mer-A1 CGAATTTA 3R 16350969 16350976 - 3R_16350969_16350976_- 0.671651291 0.517811224 0.594731258 0.108781378 CG10311 FBtr0083324|FBtr0345202 16350904|16350784 16351129|16351129 3R - 16350916 16351061 3'utr CG10311 FlyBase G51743.1 TCCTAGCTTCCTATGTTCGTTTTTAGTGATTATGTCTAACTAATAATTATAATTTAGTTGAGGCGAGCCAGCCCTTCGCTCACATCGAATTTACGCGGCCCGTGGCATTAAGTGCAATGGAATTATGTATTTAACATTTAAATAAA 17 16350977 0.986917487 9 14 128 0.888888889 1.204119983 0 0.058823529 0.111111111 17 2 0 16 3R:16350916-16351061 8 CG10311 FBtr0345202|FBtr0083324 16350784|16350904 16351129|16351129 CGAATTTA 8mer-A1 dme-miR-1006-3p 3R - 16350926 16351004 3'utr CG10311 FlyBase G39084.1 TTGAGGCGAGCCAGCCCTTCGCTCACATCGAATTTACGCGGCCCGTGGCATTAAGTGCAATGGAATTATGTATTTAACA 19 16350977 0.971104192 9 16 95 0.793103448 1.361727836 0.310344828 0.421052632 0.620689655 19 6 0 23 3R:16350926-16351004 8 8.5 2777 FBgn0038420 2 0.253333333 0.403333333 4.25 33.55263158 21.07438017 1 1 1 0.15 dme-miR-277-3p 6mer3-8 TGCATT 3R 16351095 16351100 - 3R_16351095_16351100_- 0.903230382 0.883007918 0.89311915 0.014299467 CG10311 FBtr0083324|FBtr0345202 16350904|16350784 16351129|16351129 3R - 16351087 16351146 stop_codon CG10311 FlyBase G51744.1 AGCCGTACCGTCGCTAGAATCTCCAGGAGCACTATTCATCAGAAATTGCATTCAAGAAGC 17 16351101 0.758804996 6 17 79 1 1.278753601 0 0.117647059 0.210526316 17 0 0 19 3R:16351087-16351146 6 CG10311 FBtr0345202|FBtr0083324 16350784|16350904 16351129|16351129 TGCATT 6mer3-8 dme-miR-277-3p 3R - 16351087 16351115 3'utr CG10311 FlyBase G39085.1 CTATTCATCAGAAATTGCATTCAAGAAGC 8 16351101 0.82017376 2 7 41 1 1.041392685 0 0.375 0.545454545 8 0 0 11 3R:16351087-16351115 6 9 2778 FBgn0038420 2 0.253333333 0.403333333 4.5 35.52631579 22.31404959 1 1 1 0.15 dme-miR-184-5p 6mer3-8 TGATAA 3R 16357994 16357999 - 3R_16357994_16357999_- 0.955384194 0.999999976 0.977692085 0.031548135 CG17931 FBtr0332177|FBtr0345208 16357608|16357533 16358541|16358541 3R - 16357988 16358023 3'utr CG17931 FlyBase G51747.1 CGCCGAAGAGAGAGATATAAAGATTGATAATCCCAG 12 16358006 0.963047867 4 11 56 0.923076923 1.079181246 0.307692308 0.083333333 0.153846154 12 1 0 12 3R:16357988-16358023 6 CG17931 FBtr0345208|FBtr0332177 16357533|16357608 16358541|16358541 TGATAA 6mer3-8 dme-miR-184-5p 3R - 16357985 16358029 3'utr CG17931 FlyBase G39089.1 TATGGTCGCCGAAGAGAGAGATATAAAGATTGATAATCCCAGAGC 5 16358006 0.975521942 3 4 27 0.833333333 0.698970004 0.166666667 0.2 0.333333333 5 1 0 5 3R:16357985-16358029 6 8.5 2779 FBgn0038421 429.6933333 71.91666667 110.2133333 0.01978155 0.118192352 0.077123155 7 7 7 0.15 dme-miR-283-5p 7mer-A1 GATATTA 3R 16358359 16358365 - 3R_16358359_16358365_- 0.782756526 0.781838039 0.782297282 0.000649478 CG17931 FBtr0332177|FBtr0345208|FBtr0083323 16357608|16357533|16358138 16358541|16358541|16358541 3R - 16358148 16358383 3'utr CG17931 FlyBase G51748.1 TGTATACAACTACGCATAGATATTACCGGGCTGTACAGCACGCGACATAGCAATAGCAATAGCAAGTGCCACCCAAGGACTTCGATTCTGTTCCGGTTTTTGTTCATTTTCGTTTGCAGTGCTGCTGTACGATAATTAAGTAATCTTACATTTTATTTCTCCACCTACCTGACTAAATTATTTACTGTAATGTATATATATAAATTTTCAAATAAAACATAATATGCAGCCGACAG 233 16358361 0.897830772 39 216 1412 0.919413919 1.320492475 0.124542125 0.141630901 0.267399267 233 11 11 251 3R:16358148-16358383 7 CG17931 FBtr0083323|FBtr0345208|FBtr0332177 16358138|16357533|16357608 16358541|16358541|16358541 GATATTA 7mer-A1 dme-miR-283-5p 3R - 16358240 16358378 3'utr CG17931 FlyBase G39091.1 ACAACTACGCATAGATATTACCGGGCTGTACAGCACGCGACATAGCAATAGCAATAGCAAGTGCCACCCAAGGACTTCGATTCTGTTCCGGTTTTTGTTCATTTTCGTTTGCAGTGCTGCTGTACGATAATTAAGTAAT 85 16358352 0.74668833 15 80 465 0.937984496 2.08278537 0.108527132 0.458823529 0.643410853 85 8 0 121 3R:16358240-16358378 7 89 2780 FBgn0038421 429.6933333 71.91666667 110.2133333 0.207124461 1.237543453 0.8075248 -4 -13 -8.5 0.15 dme-miR-252-5p 7mer-m8 GTACTTA 3R 16434643 16434649 + 3R_16434643_16434649_+ 0.588248438 0.587790469 0.588019454 0.000323784 CG17565 FBtr0083286 16434515 16434740 3R + 16434624 16434668 3'utr CG17565 FlyBase G43447.1 TTTCGCTTCTTGTATAAATGTACTTATTGGAAAAGGAATTGATTA 14 16434642 0.987908723 4 14 131 1 1.204119983 0.1875 0.071428571 0.1875 14 0 0 16 3R:16434624-16434668 7 CG17565 FBtr0083286 16434515 16434740 GTACTTA 7mer-m8 dme-miR-252-5p 3R + 16434616 16434661 3'utr CG17565 FlyBase G32828.1 ATTGTATTTTTCGCTTCTTGTATAAATGTACTTATTGGAAAAGGAA 17 16434642 0.986627752 3 16 140 0.954545455 1.322219295 0.227272727 0.235294118 0.409090909 17 1 0 21 3R:16434616-16434661 7 15.5 2781 FBgn0038424 261 20.12666667 30.60666667 0.059386973 0.770122557 0.506425615 1 1 1 0.15 dme-miR-8-3p 6mer2-7 AGTATT 3R 16445741 16445746 - 3R_16445741_16445746_- 0.999998533 0.847921064 0.923959798 0.107534961 Pak3 FBtr0330047|FBtr0305003 16445005|16445005 16451158|16451200 3R - 16445725 16445762 3'utr Pak3 FlyBase G51780.1 AAGGCAACGAACGGATAGTATTTTGGGGCAGTAGAAAC 10 16445746 0.97352246 2 9 55 0.916666667 1.041392685 0.333333333 0.2 0.333333333 10 1 0 11 3R:16445725-16445762 6 Pak3 FBtr0330047|FBtr0305003 16445005|16445005 16451158|16451200 AGTATT 6mer2-7 dme-miR-8-3p 3R - 16445730 16445763 3'utr Pak3 FlyBase G39112.1 CAAGGCAACGAACGGATAGTATTTTGGGGCAGTA 9 16445740 0.975775387 3 8 52 0.866666667 0.636822098 0 0.666666667 0.8 9 0 2 13 3R:16445730-16445763 6 9.5 2782 FBgn0044826 2696.55 65.35333333 100.3933333 0.00352302 0.145363664 0.094627797 0 -6 -3 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3R 16446862 16446868 - 3R_16446862_16446868_- 0.520884428 0.521221425 0.521052927 0.000238295 Pak3 FBtr0330047|FBtr0083312|FBtr0305003 16445005|16446744|16445005 16451158|16451200|16451200 3R - 16446820 16447121 3'utr Pak3 FlyBase G51784.1 GGACAGAGAGATGAGCAGGGGCCGAAAAACTCGAAGGAAACCGTCGCCAAACCGTGGATCCATATCGCATCGCTCGAGCAGTTCATCGATGGCAGGGGGGCGGGGTTATCGCTTAGATTAGATTGTCCTATGGCAAATTAGCTTACTTCAACAACGCACACAAACACGCACATATGATATACATAGATACTGTATTATTAAATGTAGGGACATAAGTTTGATTACTCTTTATATACCCGTATATATACATAATTGTGATTTAAGCGATTTTATCAAATCAGCATTATGCGACTCTTTATAAA 195 16446844 0.985377625 40 186 1526 0.960352423 1.861335239 0.145374449 0.138461538 0.259911894 195 7 2 218 3R:16446820-16447121 7 Pak3 FBtr0330047|FBtr0083312|FBtr0305003 16445005|16446744|16445005 16451158|16451200|16451200 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 16446798 16446902 3'utr Pak3 FlyBase G39114.1 GATTACTCTTTATATACCCGTATATATACATAATTGTGATTTAAGCGATTTTATCAAATCAGCATTATGCGACTCTTTATAAAATTCGTCGTAGTCAGTAAGTGC 46 16446862 0.984882078 10 44 400 0.971830986 1.838849091 0.070422535 0.413043478 0.61971831 46 2 0 69 3R:16446798-16446902 7 43 2783 FBgn0044826 2696.55 65.35333333 100.3933333 0.015946302 0.657961848 0.428315293 -24 -6 -15 0.15 dme-miR-305-5p 6mer2-7 GTACAA 3R 16451021 16451026 - 3R_16451021_16451026_- 0.991429143 0.999999998 0.99571457 0.006060542 Pak3 FBtr0330047|FBtr0083312|FBtr0305003 16445005|16446744|16445005 16451158|16451200|16451200 3R - 16451018 16451090 5'utr Pak3 FlyBase G51785.1 GTTTTGTGTGGACGAAACCGGAACTGGAACTGGAATAGAATGCTGACCGTAGTCTTTGTAGTATGTACAACCG 15 16451035 0.716082658 9 13 87 0.888888889 1.204119983 0.166666667 0.133333333 0.277777778 15 2 0 16 3R:16451018-16451090 6 Pak3 FBtr0330047|FBtr0083312|FBtr0305003 16445005|16446744|16445005 16451158|16451200|16451200 GTACAA 6mer2-7 dme-miR-305-5p 3R - 16451023 16451086 5'utr Pak3 FlyBase G39115.1 TGTGTGGACGAAACCGGAACTGGAACTGGAATAGAATGCTGACCGTAGTCTTTGTAGTATGTAC 18 16451035 0.92171435 9 17 110 0.958333333 1.06069784 0.208333333 0.277777778 0.458333333 18 0 1 23 3R:16451023-16451086 3 2 2784 FBgn0044826 2696.55 65.35333333 100.3933333 0.000741688 0.030602877 0.019921642 9 9 9 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 16457729 16457736 + 3R_16457729_16457736_+ 0.62496798 0.625329175 0.625148577 0.000255407 CG14883 FBtr0083291 16457662 16458233 3R + 16457716 16457917 3'utr CG14883 FlyBase G43455.1 TACACAAACTGTTTGCATTTAGCTGGCAGAGCTTAGCCCTTAAGACAAACTTAAGTACGCATGTGTTTTTGTAGAAGCTTTAGAAAGTATTATCCCAAGCTTACCGGTACCAGTGAAATGGAAGATATAATTTAGATAGTTTATGTGCTTTACTTTTGTTTACCTGAAGCTTTTATTCATTTTATTGACGTCCTAATTTATT 210 16457728 0.876746571 28 204 1817 0.971428571 2.376576957 0.155102041 0.142857143 0.265306122 210 7 0 238 3R:16457716-16457917 8 CG14883 FBtr0083291 16457662 16458233 TGCATTTA 8mer-A1 dme-miR-277-3p 3R + 16457653 16457756 stop_codon CG14883 FlyBase G32834.1 TGAAAGCCTAAGAGTCCTTCAGGATTTGAACGAACGATAACGACTTAGATCGACGCACACACATACACAAACTGTTTGCATTTAGCTGGCAGAGCTTAGCCCTT 53 16457728 0.984126712 11 50 389 0.935064935 1.556302501 0.220779221 0.320754717 0.532467532 53 4 1 72 3R:16457653-16457756 8 51 2785 FBgn0038432 123 8.256666667 12.72666667 0.414634146 6.176826807 4.007333683 1 1 1 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 16458164 16458169 + 3R_16458164_16458169_+ 0.739170922 0.855841951 0.797506436 0.082498926 CG14883 FBtr0083291 16457662 16458233 3R + 16458135 16458252 3'utr CG14883 FlyBase G43458.1 GTTTACCAGCATTATATGTATATGTCTATACCAAAAACCAGAATTAAAAACTACTTTTATTGTGATTATAAAAGAAAATAAAGATGATTGCAACGATTGATTTAAGTTCATACACCTG 33 16458163 0.955762528 13 30 236 0.9 1.255272505 0.275 0.181818182 0.325 33 3 1 36 3R:16458135-16458252 6 CG14883 FBtr0083291 16457662 16458233 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 16458150 16458209 3'utr CG14883 FlyBase G32839.1 ATGTATATGTCTATACCAAAAACCAGAATTAAAAACTACTTTTATTGTGATTATAAAAGA 9 16458163 0.917966287 5 9 67 1 1.079181246 0.25 0.222222222 0.416666667 9 0 0 12 3R:16458150-16458209 6 9 2786 FBgn0038432 123 8.256666667 12.72666667 0.073170732 1.09002826 0.707176532 1 1 1 0.15 dme-miR-980-5p 7mer-m1 AAAAACT 3R 16458393 16458399 - 3R_16458393_16458399_- 0.765522554 0.728155041 0.746838797 0.026422883 CG42232 FBtr0290134 16458278 16458598 3R - 16458373 16458505 3'utr CG42232 FlyBase G51802.1 ATTTATGTATCAATTAATGAAGGCGTGTTATTTTTTAATTTCTCTTGTTAATCCAACCCATTTCGGTGGGATACCGTTGAATGGAATGGCTCCCCTCGCTCAGAACAAAAACTAACCTTAATAGATTTAAGGC 36 16458392 0.971108051 16 34 228 0.947368421 1.255272505 0.105263158 0.055555556 0.105263158 36 1 1 36 3R:16458373-16458505 7 CG42232 FBtr0290134 16458278 16458598 AAAAACT 7mer-m1 dme-miR-980-5p 3R - 16458363 16458428 3'utr CG42232 FlyBase G39127.1 TGAATGGAATGGCTCCCCTCGCTCAGAACAAAAACTAACCTTAATAGATTTAAGGCATTTAAAAAT 20 16458420 0.960929876 11 19 95 0.966666667 1.462397998 0.333333333 0.45 0.633333333 20 1 0 29 3R:16458363-16458428 7 16 2787 FBgn0250754 5895.886667 65.18333333 100.1066667 0.002713756 0.245461519 0.159829515 -7 21 7 0.15 dme-bantam-3p 8mer-A1 TGATCTCA 3R 16642258 16642265 + 3R_16642258_16642265_+ 0.631041053 0.631106442 0.631073748 4.62E-05 nonA-l FBtr0333727|FBtr0083335 16642219|16642219 16643112|16642773 3R + 16642183 16642323 stop_codon nonA-l FlyBase G43468.1 ACGGACACATTGATTCATGGGGACACCGACGCTTCTAGACACTGAAACCTATATAGATAGCGACGAAAACAATAGTGATCTCATTAGTTACGCATAATATCGGACATTTCGCTCGGCTATGCGTGAACAATAACATAAATA 632 16642255 0.928516887 20 623 4300 0.987359551 2.545925329 0.130617978 0.109177215 0.209269663 632 8 1 703 3R:16642183-16642323 8 nonA-l FBtr0333727|FBtr0083335 16642219|16642219 16643112|16642773 TGATCTCA 8mer-A1 dme-bantam-3p 3R + 16642125 16642324 stop_codon nonA-l FlyBase G32850.1 AGCAACAATTCAACAATGGCTGGACCTGGAGGTCCAGATAATAGCGACGGAAACCAACACGGACACATTGATTCATGGGGACACCGACGCTTCTAGACACTGAAACCTATATAGATAGCGACGAAAACAATAGTGATCTCATTAGTTACGCATAATATCGGACATTTCGCTCGGCTATGCGTGAACAATAACATAAATAA 350 16642256 0.97857187 21 336 2267 0.960227273 1.75076545 0.164772727 0.388571429 0.59469697 350 13 8 507 3R:16642125-16642324 8 469.5 2788 FBgn0015520 285.6666667 13.51 20.79666667 1.643523921 34.75203553 22.57573329 3 2 2.5 0.15 dme-miR-31a-5p 7mer-A1 CTTGCCA 3R 16644817 16644823 + 3R_16644817_16644823_+ 0.421327866 0.692884886 0.557106376 0.192019796 CG10326 FBtr0083336|FBtr0333728 16644750|16644750 16645171|16645171 3R + 16644768 16644882 3'utr CG10326 FlyBase G43474.1 AAACTCATCACCATTTGACCAAAAATATAAAACATGCCTAAGTCATCTACTTGCCATTATGCACACATCGCATCACTAAATCACACATTAGGCGCATTGAATTTGAAACTATAAA 19 16644815 0.758719376 13 16 106 0.875 1.021189299 0.291666667 0.210526316 0.375 19 2 1 21 3R:16644768-16644882 7 CG10326 FBtr0333728|FBtr0083336 16644750|16644750 16645171|16645171 CTTGCCA 7mer-A1 dme-miR-31a-5p 3R + 16644750 16644840 stop_codon CG10326 FlyBase G32854.1 AAAGGAAAGCAACCAGATAAACTCATCACCATTTGACCAAAAATATAAAACATGCCTAAGTCATCTACTTGCCATTATGCACACATCGCAT 11 16644816 0.991697811 7 8 78 0.777777778 1.146128036 0.055555556 0.545454545 0.722222222 11 4 0 14 3R:16644750-16644840 7 6.5 2789 FBgn0038453 605.7533333 63.22 96.46 0.01073044 0.102815565 0.067385445 2 1 1.5 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3R 16645060 16645066 + 3R_16645060_16645066_+ 0.521114104 0.520351581 0.520732842 0.000539169 CG10326 FBtr0083336|FBtr0333728 16644750|16644750 16645171|16645171 3R + 16644930 16645149 3'utr CG10326 FlyBase G43475.1 AACTAGCAAATCCGTGGTTCTGGCCCCATCACATCTCCTACTATAAGTTTGTAACATGTAAGACAGAAGTATTCTCGAAACGAGGCGTACGGAGAGAGAAAAAAACGCGCAACAAAAGACAAGGCATTTTTGTGATTATTTTGTGAGTTAATTGAAATTTATGATAATCCCAAGTAAGATAAAAAAAGGAACTTAAGCGTCTAATGAACTATATTTAAAT 229 16645059 0.989504324 28 216 2102 0.952702703 2.149219113 0.097972973 0.227074236 0.402027027 229 13 1 282 3R:16644930-16645149 7 CG10326 FBtr0333728|FBtr0083336 16644750|16644750 16645171|16645171 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 16644978 16645135 3'utr CG10326 FlyBase G32855.1 TTGTAACATGTAAGACAGAAGTATTCTCGAAACGAGGCGTACGGAGAGAGAAAAAAACGCGCAACAAAAGACAAGGCATTTTTGTGATTATTTTGTGAGTTAATTGAAATTTATGATAATCCCAAGTAAGATAAAAAAAGGAACTTAAGCGTCTAATG 134 16645059 0.989444456 17 124 1189 0.93442623 1.755874856 0.202185792 0.305970149 0.491803279 134 10 2 171 3R:16644978-16645135 7 146 2790 FBgn0038453 605.7533333 63.22 96.46 0.241022198 2.309395761 1.513580759 1 1 1 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 3R 16649933 16649939 + 3R_16649933_16649939_+ 0.482252943 0.439396275 0.460824609 0.030304192 Cctgamma FBtr0302370|FBtr0083338|FBtr0302371|FBtr0083337 16649738|16649738|16649738|16649738 16649978|16649978|16649978|16649978 3R + 16649921 16649957 3'utr Cctgamma FlyBase G43487.1 ACAAAATTCAAATGCATTTGCTCTCATTAACAGTACA 35 16649938 0.717592436 4 33 272 0.930232558 1.301029996 0 0.2 0.348837209 35 2 1 40 3R:16649921-16649957 7 Cctgamma FBtr0083337|FBtr0302371|FBtr0083338|FBtr0302370 16649738|16649738|16649738|16649738 16649978|16649978|16649978|16649978 TGCATTT 7mer-m8 dme-miR-277-3p 3R + 16649923 16649958 3'utr Cctgamma FlyBase G32867.1 AAAATTCAAATGCATTTGCTCTCATTAACAGTACAC 23 16649938 0.692324348 5 22 159 0.975609756 1.602059991 0.097560976 0.47826087 0.707317073 23 1 0 40 3R:16649923-16649958 7 27.5 2791 FBgn0015019 3709.713333 222.3133333 340.54 0.007412972 0.123699283 0.080754096 -5 -5 -5 0.15 dme-miR-277-3p 6mer3-8 TGCATT 3R 16989923 16989928 + 3R_16989923_16989928_+ 0.995904608 0.999132079 0.997518343 0.002282187 MESK4 FBtr0337059|FBtr0083367 16989884|16989884 16990419|16990321 3R + 16989893 16990007 3'utr MESK4 FlyBase G43490.1 TGCCGAAGGAGGGAGGGGTATTCCACTGATTGCATTCTGTCCCATTGTTGGACTATTTTTAACCGTCCGCTGGATTATCAGCGCTGCCCTCGCTGCCCTGCAGTCGTCGATTGCA 26 16989922 0.982296852 13 26 197 1 1.491361694 0.258064516 0.192307692 0.322580645 26 0 0 31 3R:16989893-16990007 6 MESK4 FBtr0083367|FBtr0337059 16989884|16989884 16990321|16990419 TGCATT 6mer3-8 dme-miR-277-3p 3R + 16989896 16990018 3'utr MESK4 FlyBase G32871.1 CGAAGGAGGGAGGGGTATTCCACTGATTGCATTCTGTCCCATTGTTGGACTATTTTTAACCGTCCGCTGGATTATCAGCGCTGCCCTCGCTGCCCTGCAGTCGTCGATTGCACCTACAGTGCT 34 16989926 0.982284608 17 33 254 0.961538462 1.698970004 0.480769231 0.382352941 0.596153846 34 2 0 50 3R:16989896-16990018 6 18.5 2792 FBgn0043069 8.44 0.73 1.12 2.191943128 25.34246575 16.51785714 1 -3 -1 0.15 dme-miR-277-3p 6mer3-8 TGCATT 3R 16994135 16994140 + 3R_16994135_16994140_+ 0.999593618 0.999998417 0.999796017 0.000286237 CG31274 FBtr0083369 16994096 16994532 3R + 16994101 16994219 3'utr CG31274 FlyBase G43495.1 AATATGCCGAAGGAGGGAGGGGTATTCCACTGATTGCATTCTGTCCCATTGTTGGACTATTTTTAACCGTCCGCTGGATTATCAGCGCTGCCCTCGCTGCCCTGCAGTCGTCGATTGCA 32 16994134 0.98470536 15 31 249 0.970588235 1.51851394 0.264705882 0.0625 0.117647059 32 1 0 33 3R:16994101-16994219 6 CG31274 FBtr0083369 16994096 16994532 TGCATT 6mer3-8 dme-miR-277-3p 3R + 16994101 16994159 3'utr CG31274 FlyBase G32875.1 AATATGCCGAAGGAGGGAGGGGTATTCCACTGATTGCATTCTGTCCCATTGTTGGACTA 18 16994134 0.984050713 7 17 131 1 1.397940009 0.2 0.388888889 0.56 18 0 0 25 3R:16994101-16994159 6 18 2793 FBgn0051274 0 0 0 Inf Inf Inf 1 1 1 0.15 dme-miR-8-3p 6mer2-7 AGTATT 3R 16994627 16994632 - 3R_16994627_16994632_- 0.853796093 0.905967927 0.87988201 0.036891034 CG17556 FBtr0083375 16994540 16994810 3R - 16994550 16994681 3'utr CG17556 FlyBase G51890.1 AAAAACAATTTTATAGTCAGTGCATCCAAGCAACTGTTTTTGGTGGTCTAGTATTGTTGACGGCATTGAAACCGGATAATTTAAAACATTTATTATTGAGGTAGGCAAAAATAGTCCTGTAATAAATTTAGA 35 16994641 0.987332024 15 34 293 0.97826087 1.653212514 0.130434783 0.228571429 0.413043478 35 1 0 45 3R:16994550-16994681 6 CG17556 FBtr0083375 16994540 16994810 AGTATT 6mer2-7 dme-miR-8-3p 3R - 16994596 16994655 3'utr CG17556 FlyBase G39189.2 CAAGCAACTGTTTTTGGTGGTCTAGTATTGTTGACGGCATTGAAACCGGATAATTTAAAA 14 16994641 0.985346728 5 12 104 0.888888889 1.204119983 0 0.214285714 0.388888889 14 2 0 16 3R:16994596-16994655 6 16.5 2794 FBgn0038462 431.2066667 43.27333333 66.41 0.038264715 0.381297181 0.248456558 9 9 9 0.15 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 16999384 16999391 + 3R_16999384_16999391_+ 0.383772505 0.37077256 0.377272532 0.009192317 CG3534 FBtr0083370 16999271 16999449 3R + 16999295 16999421 3'utr CG3534 FlyBase G43509.1 CATTCCAGTTTATACTCCGTACATTCACAAACTGATTCCTTCTTAAACGTCTCCTGTAATTGACAGAACTTAAGTGCAATTAACAAATTCTGTGATTGACGATTTATTACAAATTTATGCGAAACCA 89 16999383 0.982934586 17 84 636 0.92920354 1.322219295 0.309734513 0.179775281 0.353982301 89 4 4 105 3R:16999295-16999421 8 CG3534 FBtr0083370 16999271 16999449 CTGTGATT 8mer-m1 dme-miR-308-3p 3R + 16999317 16999409 3'utr CG3534 FlyBase G32883.1 ATTCACAAACTGATTCCTTCTTAAACGTCTCCTGTAATTGACAGAACTTAAGTGCAATTAACAAATTCTGTGATTGACGATTTATTACAAATT 59 16999383 0.761703922 13 56 393 0.957746479 1.832508913 0.225352113 0.169491525 0.309859155 59 3 0 68 3R:16999317-16999409 8 54 2795 FBgn0038463 327.35 20.21 30.99 0.164961051 2.671944582 1.74249758 1 1 1 0.15 dme-miR-92b-3p 7mer-A1 TGCAATA 3R 17087931 17087937 + 3R_17087931_17087937_+ 0.778377257 0.782756238 0.780566748 0.00309635 GckIII FBtr0083399 17087725 17087988 3R + 17087902 17087951 3'utr GckIII FlyBase G43566.1 AGCATATAATATGTATTCGTTTGTTTATCTGCAATATTAATCTAATGTAA 16 17087929 0.990468693 3 16 189 1 1.230448921 0.058823529 0.0625 0.117647059 16 0 0 17 3R:17087902-17087951 7 GckIII FBtr0083399 17087725 17087988 TGCAATA 7mer-A1 dme-miR-92b-3p 3R + 17087920 17087948 3'utr GckIII FlyBase G32932.1 GTTTGTTTATCTGCAATATTAATCTAATG 5 17087929 0.759707324 2 5 50 1 0.84509804 0.428571429 0.4 0.571428571 5 0 0 7 3R:17087920-17087948 7 10 2796 FBgn0266465 620.1 30.44666667 46.71666667 0.016126431 0.328443179 0.214056368 2 2 2 0.15 dme-miR-184-5p 6mer3-8 TGATAA 3R 17091585 17091590 + 3R_17091585_17091590_+ 0.99539933 0.525789056 0.760594193 0.332064557 cal1 FBtr0083400 17091397 17091938 3R + 17091568 17091614 3'utr cal1 FlyBase G43578.1 AATTACATGATCGATAGTGATAATAGAAAACATAATACGTCATAATC 14 17091582 0.916644137 4 12 83 0.823529412 0.669006781 0.176470588 0.214285714 0.352941176 14 1 2 14 3R:17091568-17091614 6 cal1 FBtr0083400 17091397 17091938 TGATAA 6mer3-8 dme-miR-184-5p 3R + 17091573 17091603 3'utr cal1 FlyBase G32941.1 CATGATCGATAGTGATAATAGAAAACATAAT 12 17091582 0.914274075 3 11 60 0.888888889 0.726998728 0.166666667 0.416666667 0.611111111 12 0 2 16 3R:17091573-17091603 6 13 2797 FBgn0038478 575.3666667 19.37333333 29.76333333 0.022594288 0.671025465 0.436779035 3 3 3 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 17091795 17091800 - 3R_17091795_17091800_- 0.974230536 0.946585909 0.960408222 0.019547684 cher FBtr0332167|FBtr0337102|FBtr0089471|FBtr0290013|FBtr0337101|FBtr0337100|FBtr0089473|FBtr0290014|FBtr0290015|FBtr0303364 17091531|17091531|17091531|17091531|17091531|17091531|17091531|17091531|17091531|17091531 17092039|17092039|17092039|17092039|17092039|17092039|17092039|17092039|17092039|17092039 3R - 17091780 17091842 3'utr cher FlyBase G51937.2 AGAAGCTTCTGTTTTTCGACGCGCCATTTTCACTCTTTAAATTGATCTTACGTTTTATTTGTT 25 17091801 0.757886594 6 23 271 0.933333333 1.447158031 0.033333333 0.2 0.333333333 25 2 0 28 3R:17091780-17091842 6 cher FBtr0089473|FBtr0290014|FBtr0290015|FBtr0303364|FBtr0337102|FBtr0332167|FBtr0290013|FBtr0089471|FBtr0337101|FBtr0337100 17091531|17091531|17091531|17091531|17091531|17091531|17091531|17091531|17091531|17091531 17092039|17092039|17092039|17092039|17092039|17092039|17092039|17092039|17092039|17092039 TGATCT 6mer3-8 dme-bantam-3p 3R - 17091789 17091811 3'utr cher FlyBase G39225.1 ACTCTTTAAATTGATCTTACGTT 9 17091801 0.799675567 2 8 81 0.846153846 1.041392685 0 0.333333333 0.538461538 9 2 0 11 3R:17091789-17091811 6 14 2798 FBgn0014141 11202.06 173.88 266.8866667 0.00124977 0.080515298 0.052456723 1 1 1 0.15 dme-miR-7-5p 6mer2-7 TCTTCC 3R 17091840 17091845 + 3R_17091840_17091845_+ 0.863465433 0.781631965 0.822548699 0.057864952 cal1 FBtr0083400 17091397 17091938 3R + 17091822 17091882 3'utr cal1 FlyBase G43580.1 CGTCGAAAAACAGAAGCTTCTTCCTTCCATGTATGTACAAATAACAAAAACTTACCTAAAA 12 17091842 0.982488993 5 11 77 0.928571429 0.812913357 0.142857143 0.166666667 0.285714286 12 0 1 13 3R:17091822-17091882 6 cal1 FBtr0083400 17091397 17091938 TCTTCC 6mer2-7 dme-miR-7-5p 3R + 17091830 17091856 3'utr cal1 FlyBase G32943.1 AACAGAAGCTTCTTCCTTCCATGTATG 6 17091842 0.681129005 2 6 43 1 1 0.3 0.5 0.7 6 0 0 10 3R:17091830-17091856 6 8 2799 FBgn0038478 575.3666667 19.37333333 29.76333333 0.013904177 0.412938747 0.268787098 -2 -2 -2 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 17389770 17389775 + 3R_17389770_17389775_+ 0.985764375 0.596397719 0.791081047 0.275323834 lute FBtr0306209|FBtr0306210|FBtr0083435|FBtr0330037 17388979|17388979|17388979|17389153 17390265|17390265|17390265|17390265 3R + 17389759 17389789 3'utr lute FlyBase G43607.1 ATACACACATCTGATCTGATAATGATAAACT 6 17389769 0.854373975 3 5 37 0.857142857 0.77815125 0.142857143 0.166666667 0.285714286 6 1 0 6 3R:17389759-17389789 6 lute FBtr0306209|FBtr0306210|FBtr0083435|FBtr0330037 17388979|17388979|17388979|17389153 17390265|17390265|17390265|17390265 TGATCT 6mer3-8 dme-bantam-3p 3R + 17389723 17389801 3'utr lute FlyBase G32960.1 ATACCAAACATATTTTTGCCAGCATATACCTAACATATACACACATCTGATCTGATAATGATAAACTATAGTCCTAAAC 9 17389769 0.984205745 7 8 63 0.9 0.653212514 0.3 0.111111111 0.2 9 0 1 9 3R:17389723-17389801 6 6.5 2800 FBgn0262871 490.37 16.86 25.93333333 0.013255297 0.385527877 0.250642674 1 1 1 0.15 dme-miR-12-5p 6mer2-7 ATACTC 3R 17395270 17395275 - 3R_17395270_17395275_- 0.98169031 0.97951265 0.98060148 0.001539866 Sur-8 FBtr0083447|FBtr0339531|FBtr0083448 17395197|17395197|17395197 17397335|17397176|17397335 3R - 17395253 17395298 3'utr Sur-8 FlyBase G51982.1 AGATGATTAAGTCAAGCATAATGATACTCCTAAAAACAAAAATCAT 56 17395277 0.948712545 4 51 254 0.931506849 1.531478917 0.109589041 0.214285714 0.397260274 56 4 1 68 3R:17395253-17395298 6 Sur-8 FBtr0083448|FBtr0339531|FBtr0083447 17395197|17395197|17395197 17397335|17397176|17397335 ATACTC 6mer2-7 dme-miR-12-5p 3R - 17395258 17395292 3'utr Sur-8 FlyBase G39249.1 TTAAGTCAAGCATAATGATACTCCTAAAAACAAAA 42 17395277 0.734667913 4 38 194 0.929577465 1.819543936 0.098591549 0.476190476 0.690140845 42 5 0 66 3R:17395258-17395292 6 48.5 2801 FBgn0038504 2699.363333 76.09666667 116.9633333 0.0179672 0.637347234 0.414659865 2 2 2 0.15 dme-miR-986-5p 6mer2-7 TTCGAG 3R 17395375 17395380 - 3R_17395375_17395380_- 0.945621838 0.932553527 0.939087682 0.009240684 Sur-8 FBtr0083447|FBtr0339531|FBtr0083448 17395197|17395197|17395197 17397335|17397176|17397335 3R - 17395357 17395396 3'utr Sur-8 FlyBase G51983.1 CAGAGTTTGGCGAAATTTCGAGCCAATCGCAAATAGAAAC 11 17395381 0.954881325 2 10 56 0.928571429 1.113943352 0.357142857 0.272727273 0.428571429 11 1 0 13 3R:17395357-17395396 6 Sur-8 FBtr0083448|FBtr0339531|FBtr0083447 17395197|17395197|17395197 17397335|17397176|17397335 TTCGAG 6mer2-7 dme-miR-986-5p 3R - 17395367 17395390 3'utr Sur-8 FlyBase G39250.1 TTGGCGAAATTTCGAGCCAATCGC 5 17395381 0.735861256 2 5 25 1 0.903089987 0 0.4 0.625 5 0 0 8 3R:17395367-17395390 6 8 2802 FBgn0038504 2699.363333 76.09666667 116.9633333 0.002963662 0.105129441 0.068397503 1 1 1 0.15 dme-miR-8-3p 7mer-A1 AGTATTA 3R 17396518 17396524 - 3R_17396518_17396524_- 0.666918982 0.815318991 0.741118987 0.104934646 Sur-8 FBtr0083447|FBtr0339531|FBtr0083448 17395197|17395197|17395197 17397335|17397176|17397335 3R - 17396490 17396566 3'utr Sur-8 FlyBase G51988.1 GTAGTCGTATTTTGTAAAAGCAAGCGCATAAAAGAAGCAACAAGTATTAAACTGCGTGTAATTTGTTTAAATAAGAA 9 17396538 0.999708046 5 9 42 1 1.041392685 0.090909091 0.222222222 0.363636364 9 0 0 11 3R:17396490-17396566 7 Sur-8 FBtr0083448|FBtr0339531|FBtr0083447 17395197|17395197|17395197 17397335|17397176|17397335 AGTATTA 7mer-A1 dme-miR-8-3p 3R - 17396509 17396549 3'utr Sur-8 FlyBase G39254.1 AAGCAAGCGCATAAAAGAAGCAACAAGTATTAAACTGCGTG 7 17396514 0.999381543 2 6 17 1 1 0 0.5 0.7 6 0 0 10 3R:17396509-17396549 7 3 2803 FBgn0038504 2699.363333 76.09666667 116.9633333 0.001111373 0.03942354 0.025649064 14 -10 2 0.15 dme-miR-980-5p 6mer3-8 GAAAAA 3R 17396625 17396630 - 3R_17396625_17396630_- 0.992372064 0.994487108 0.993429586 0.001495531 Sur-8 FBtr0083447|FBtr0339531|FBtr0083448 17395197|17395197|17395197 17397335|17397176|17397335 3R - 17396627 17396659 3'utr Sur-8 FlyBase G51989.1 AAAAAAACGCAAGCGCCAAGGAATTGTTTGAAA 18 17396633 0.97268292 4 12 70 0.666666667 1.146128036 0.142857143 0.166666667 0.285714286 18 7 0 14 3R:17396627-17396659 3 Sur-8 FBtr0083448|FBtr0339531|FBtr0083447 17395197|17395197|17395197 17397335|17397176|17397335 GAAAAA 6mer3-8 dme-miR-980-5p 3R - 17396576 17396654 3'utr Sur-8 FlyBase G39255.1 AACGCAAGCGCCAAGGAATTGTTTGAAAAAATTTAAAACTAAAAACAAAAAGTGGTTAAGAAATTATTAATCTGTATAC 14 17396632 0.951801818 6 13 57 0.888888889 1.204119983 0.111111111 0.214285714 0.388888889 14 2 0 16 3R:17396576-17396654 6 13.5 2804 FBgn0038504 2699.363333 76.09666667 116.9633333 0.005001179 0.177405931 0.115420787 3 2 2.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3R 17396769 17396775 - 3R_17396769_17396775_- 0.565475064 0.566270112 0.565872588 0.00056215 Sur-8 FBtr0083447|FBtr0339531|FBtr0083448|FBtr0339532 17395197|17395197|17395197|17396664 17397335|17397176|17397335|17397335 3R - 17396714 17396818 3'utr Sur-8 FlyBase G51990.2 CAGAGTCCGCACTTTAGGTTTTAATTTAACTCATGCTTCCAAGCTAGTCAAAAATGTAACACGCGAAACGAATCGAAAGTAAATTGAAAGCTTTAAATCTTCTGT 35 17396783 0.977127394 8 31 215 0.891304348 1.311753861 0.282608696 0.228571429 0.413043478 35 4 1 41 3R:17396714-17396818 7 Sur-8 FBtr0339532|FBtr0083448|FBtr0339531|FBtr0083447 17396664|17395197|17395197|17395197 17397335|17397335|17397176|17397335 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R - 17396759 17396796 3'utr Sur-8 FlyBase G39256.1 AATTTAACTCATGCTTCCAAGCTAGTCAAAAATGTAAC 15 17396782 0.694486652 5 12 83 0.833333333 1.176091259 0.166666667 0.2 0.333333333 15 3 0 15 3R:17396759-17396796 7 17 2805 FBgn0038504 2699.363333 76.09666667 116.9633333 0.006297781 0.223400061 0.145344695 8 7 7.5 0.15 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 17396895 17396902 - 3R_17396895_17396902_- 0.623945645 0.624214395 0.62408002 0.00019007 Sur-8 FBtr0083447|FBtr0339531|FBtr0083448|FBtr0339532 17395197|17395197|17395197|17396664 17397335|17397176|17397335|17397335 3R - 17396824 17396999 3'utr Sur-8 FlyBase G51991.1 TGATATCAGCTACTTTCCCCAAAGCGATTCTAATTGCTTAACCTTCTACTTAGGCTTACTCCCTTAAACCGACTGGAGTGCGTTGGCTGACAAACGATAGCTTTAAAACGTTATACCAATGTCCCGCGTATTGTAAACTGCCCCGATTTGCTTTTTATTCTTTCTGTGTTCAATCA 82 17396902 0.939516592 26 80 537 0.988636364 1.638489257 0.284090909 0.048780488 0.113636364 82 0 1 87 3R:17396824-17396999 8 Sur-8 FBtr0339532|FBtr0083448|FBtr0339531|FBtr0083447 17396664|17395197|17395197|17395197 17397335|17397335|17397176|17397335 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R - 17396837 17396949 3'utr Sur-8 FlyBase G39257.1 TAGGCTTACTCCCTTAAACCGACTGGAGTGCGTTGGCTGACAAACGATAGCTTTAAAACGTTATACCAATGTCCCGCGTATTGTAAACTGCCCCGATTTGCTTTTTATTCTTT 68 17396902 0.926844242 18 63 395 0.947916667 1.260071388 0.427083333 0.352941176 0.541666667 68 1 4 91 3R:17396837-17396949 8 46.5 2806 FBgn0038504 2699.363333 76.09666667 116.9633333 0.017226284 0.611064874 0.397560489 0 0 0 0.15 dme-miR-184-3p 6mer2-7 CCGTCC 3R 17397142 17397147 - 3R_17397142_17397147_- 0.935902318 0.852116324 0.894009321 0.059245649 Sur-8 FBtr0083447|FBtr0339531|FBtr0083448|FBtr0339532 17395197|17395197|17395197|17396664 17397335|17397176|17397335|17397335 3R - 17397038 17397194 stop_codon Sur-8 FlyBase G51992.1 AGCAGCGACCGTCGCTAACGGTGCGATCTCAGCTAACGGGCAAGATCCCGTCCCCATCCTTTATACCATTCATTAAGGGAGAAAGCCATGATAGATAGGTGTTTTAGTTGAAATCGTTCTAAAGCGGTATAAGCTTGATAAAGATTCTAGTTTTTTT 75 17397149 0.973724553 17 70 371 0.926315789 1.245512668 0.084210526 0.213333333 0.378947368 75 3 4 88 3R:17397038-17397194 6 Sur-8 FBtr0339532|FBtr0083448|FBtr0339531|FBtr0083447 17396664|17395197|17395197|17395197 17397335|17397335|17397176|17397335 CCGTCC 6mer2-7 dme-miR-184-3p 3R - 17397094 17397199 stop_codon Sur-8 FlyBase G39259.1 CCAGAAGCAGCGACCGTCGCTAACGGTGCGATCTCAGCTAACGGGCAAGATCCCGTCCCCATCCTTTATACCATTCATTAAGGGAGAAAGCCATGATAGATAGGTG 46 17397149 0.940518818 13 38 156 0.847222222 1.484299839 0.166666667 0.456521739 0.652777778 46 10 1 61 3R:17397094-17397199 6 23 2807 FBgn0038504 2699.363333 76.09666667 116.9633333 0.008520528 0.302247142 0.196642823 2 2 2 0.15 "dme-miR-995-3p,dme-miR-998-3p" 6mer2-7 GGTGCT 3R 17397246 17397251 - 3R_17397246_17397251_- 0.583442785 0.97549647 0.779469628 0.27722383 Sur-8 FBtr0083447|FBtr0083448|FBtr0339532 17395197|17395197|17396664 17397335|17397335|17397335 3R - 17397203 17397277 3'utr Sur-8 FlyBase G51993.1 AGCTGCAGACGGTGAACCAGGCGCCCGGTGCTGGTGGCAACGGTGGTGGAGGAGCAGCGGCAGCAGGAGGATCCG 10 17397249 0.93622051 3 10 31 1 1.079181246 0.25 0.2 0.333333333 10 0 0 12 3R:17397203-17397277 6 Sur-8 FBtr0339532|FBtr0083448|FBtr0083447 17396664|17395197|17395197 17397335|17397335|17397335 GGTGCT 6mer2-7 "dme-miR-995-3p,dme-miR-998-3p" 3R - 17397226 17397258 3'utr Sur-8 FlyBase G39260.1 GGCGCCCGGTGCTGGTGGCAACGGTGGTGGAGG 9 17397249 0.93987847 2 8 28 0.909090909 0.698970004 0.454545455 0.222222222 0.363636364 9 0 1 10 3R:17397226-17397258 6 8.5 2808 FBgn0038504 2699.363333 76.09666667 116.9633333 0.003148891 0.111700031 0.072672347 -2 -2 -2 0.15 dme-miR-1007-3p 6mer3-8 TGAGCT 3R 17532337 17532342 - 3R_17532337_17532342_- 0.999725753 0.998717763 0.999221758 0.000712764 CG5823 FBtr0083505|FBtr0321266 17532323|17532323 17532719|17532719 3R - 17532321 17532357 3'utr CG5823 FlyBase G52005.1 AAGCCCGGCAACATATGAGCTCGTGTACAAATTAACC 11 17532342 0.948921814 4 10 49 0.933333333 1.146128036 0.2 0.272727273 0.466666667 11 1 0 14 3R:17532321-17532357 6 CG5823 FBtr0083505|FBtr0321266 17532323|17532323 17532719|17532719 TGAGCT 6mer3-8 dme-miR-1007-3p 3R - 17532320 17532403 3'utr CG5823 FlyBase G39270.1 AATGCAACGTGAATAATGCCAGAAATATGTTTGTAAATGAATAAAGAAGCCCGGCAACATATGAGCTCGTGTACAAATTAACCA 24 17532342 0.88281547 5 22 95 0.864864865 1.505149978 0.189189189 0.291666667 0.540540541 24 5 0 32 3R:17532320-17532403 6 12 2809 FBgn0038515 447.3266667 29.51666667 45.11666667 0.026826033 0.406549972 0.265977096 0 0 0 0.15 dme-bantam-3p 7mer-m8 TGATCTC 3R 17544044 17544050 + 3R_17544044_17544050_+ 0.650625019 0.650417222 0.650521121 0.000146937 SF1 FBtr0331707 17543545 17545148 3R + 17544016 17544084 3'utr SF1 FlyBase G43624.1 AGGGTATCGAAGTGCCCGAGGGCCATAATGATCTCCGCAGAATGCAGTTGCGAGAACTGGCTCAGCTGA 119 17544044 0.730581036 6 115 399 0.965986395 1.45331834 0.401360544 0.201680672 0.353741497 119 1 4 142 3R:17544016-17544084 7 SF1 FBtr0331707 17543545 17545148 TGATCTC 7mer-m8 dme-bantam-3p 3R + 17544016 17544063 3'utr SF1 FlyBase G32972.1 AGGGTATCGAAGTGCCCGAGGGCCATAATGATCTCCGCAGAATGCAGT 60 17544044 0.697515398 2 58 201 0.977272727 1.934498451 0.431818182 0.35 0.556818182 60 2 0 86 3R:17544016-17544063 7 84.5 2810 FBgn0025571 727 34.72 53.27 0.116231087 2.43375576 1.586258682 0 0 0 0.15 dme-miR-980-3p 6mer3-8 GGCAGC 3R 17544575 17544580 + 3R_17544575_17544580_+ 0.999983499 0.997686162 0.998834831 0.001624436 SF1 FBtr0331707 17543545 17545148 3R + 17544534 17544594 3'utr SF1 FlyBase G43627.1 ATGGAGCACGGTATGGGATTGGACCAGCACGGTCACGGTTTGGCAGCGATGGATCACGGCA 11 17544574 0.95117855 4 10 44 1 1.079181246 0.333333333 0.090909091 0.166666667 11 0 0 12 3R:17544534-17544594 6 SF1 FBtr0331707 17543545 17545148 GGCAGC 6mer3-8 dme-miR-980-3p 3R + 17544551 17544607 3'utr SF1 FlyBase G32974.1 ATTGGACCAGCACGGTCACGGTTTGGCAGCGATGGATCACGGCATGAGCCTTGGCAT 7 17544574 0.956565382 3 7 33 1 1.041392685 0.181818182 0.428571429 0.636363636 7 0 0 11 3R:17544551-17544607 6 6.5 2811 FBgn0025571 727 34.72 53.27 0.008940853 0.187211982 0.122019899 1 1 1 0.15 dme-miR-980-5p 6mer3-8 GAAAAA 3R 17673893 17673898 - 3R_17673893_17673898_- 0.997098593 0.999999998 0.998549296 0.0020516 alt FBtr0335026|FBtr0335027 17673730|17673730 17674823|17674823 3R - 17673853 17673928 3'utr alt FlyBase G52043.1 ATTGTCGGAACCTGTTGCATGCGACATACTGAAAAATTAGGAAAACCAACAAATTCAAGCCCATCAGCAACCACAA 9 17673909 0.920816002 6 9 29 1 1.041392685 0.090909091 0.111111111 0.272727273 9 0 0 11 3R:17673853-17673928 6 alt FBtr0335027|FBtr0335026 17673730|17673730 17674823|17674823 GAAAAA 6mer3-8 dme-miR-980-5p 3R - 17673872 17673924 3'utr alt FlyBase G39298.1 TCGGAACCTGTTGCATGCGACATACTGAAAAATTAGGAAAACCAACAAATTCA 6 17673892 0.950685687 4 5 26 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3R:17673872-17673924 6 4 2812 FBgn0038535 6868.54 219.92 337.8266667 0.000582365 0.018188432 0.011840392 11 -6 2.5 0.15 dme-miR-980-3p 6mer3-8 GGCAGC 3R 17674044 17674049 - 3R_17674044_17674049_- 0.961316643 0.961347631 0.961332137 2.19E-05 alt FBtr0335026|FBtr0335027 17673730|17673730 17674823|17674823 3R - 17674023 17674068 3'utr alt FlyBase G52045.1 AATCCCAGGAAGAGCAAATGGCAGCAGCAACATTTAATTAAGCGTA 64 17674050 0.917603596 2 60 34 0.9625 1.58546073 0.1 0.203125 0.3625 64 2 1 77 3R:17674023-17674068 6 alt FBtr0335027|FBtr0335026 17673730|17673730 17674823|17674823 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 17674030 17674068 3'utr alt FlyBase G39299.1 AATCCCAGGAAGAGCAAATGGCAGCAGCAACATTTAATT 45 17674050 0.999590906 2 45 18 1 1.880813592 0.184210526 0.488888889 0.697368421 45 0 0 76 3R:17674030-17674068 6 53 2813 FBgn0038535 6868.54 219.92 337.8266667 0.007716341 0.240996726 0.156885188 1 1 1 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 17674291 17674298 - 3R_17674291_17674298_- 0.621362494 0.62441972 0.622891107 0.002161767 alt FBtr0089412|FBtr0089413|FBtr0335026|FBtr0089415|FBtr0089414|FBtr0089417|FBtr0335027|FBtr0089416 17674184|17674184|17673730|17674184|17674184|17674184|17673730|17674184 17674823|17674823|17674823|17674823|17674823|17674823|17674823|17674823 3R - 17674219 17674343 3'utr alt FlyBase G52047.1 ATTTAACACATACTTTGCATGCGATTATTATTTTTGTGTTACACTTGCATTTAAAAACGCGCTTTAAACAATTGTATATGTATCTTATGTTAAGCAAATGAATTTAAAACCCAGCTACTTAAAAT 39 17674299 0.983518202 13 39 299 1 1.681241237 0.520833333 0.179487179 0.333333333 39 0 0 48 3R:17674219-17674343 8 alt FBtr0335027|FBtr0089416|FBtr0089414|FBtr0089417|FBtr0335026|FBtr0089415|FBtr0089412|FBtr0089413 17673730|17674184|17674184|17674184|17673730|17674184|17674184|17674184 17674823|17674823|17674823|17674823|17674823|17674823|17674823|17674823 TGCATTTA 8mer-A1 dme-miR-277-3p 3R - 17674234 17674310 3'utr alt FlyBase G39301.1 TTGTGTTACACTTGCATTTAAAAACGCGCTTTAAACAATTGTATATGTATCTTATGTTAAGCAAATGAATTTAAAAC 25 17674299 0.985353548 8 24 184 0.971428571 1.531478917 0.571428571 0.32 0.514285714 25 1 0 34 3R:17674234-17674310 8 24 2814 FBgn0038535 6868.54 219.92 337.8266667 0.003494192 0.109130593 0.071042349 1 1 1 0.15 dme-miR-2b-2-5p 7mer-A1 TGAAGAA 3R 17674567 17674573 - 3R_17674567_17674573_- 0.820972163 0.822441945 0.821707054 0.001039235 alt FBtr0089412|FBtr0089413|FBtr0335026|FBtr0089415|FBtr0089414|FBtr0089417|FBtr0335027|FBtr0089416 17674184|17674184|17673730|17674184|17674184|17674184|17673730|17674184 17674823|17674823|17674823|17674823|17674823|17674823|17674823|17674823 3R - 17674553 17674601 3'utr alt FlyBase G52051.1 TAGTAGCGAGAACCAACAATTATGAGAATGAAGAACTATGGAACGCTTT 35 17674563 0.676865933 5 34 151 0.975609756 1.602059991 0.12195122 0.142857143 0.268292683 35 1 0 40 3R:17674553-17674601 7 alt FBtr0335027|FBtr0089416|FBtr0089414|FBtr0089417|FBtr0335026|FBtr0089415|FBtr0089412|FBtr0089413 17673730|17674184|17674184|17674184|17673730|17674184|17674184|17674184 17674823|17674823|17674823|17674823|17674823|17674823|17674823|17674823 TGAAGAA 7mer-A1 dme-miR-2b-2-5p 3R - 17674552 17674597 3'utr alt FlyBase G39302.1 AGCGAGAACCAACAATTATGAGAATGAAGAACTATGGAACGCTTTA 21 17674578 0.950765909 5 19 86 0.967741935 1.477121255 0.161290323 0.285714286 0.516129032 21 1 0 30 3R:17674552-17674597 7 27 2815 FBgn0038535 6868.54 219.92 337.8266667 0.003930966 0.122771917 0.079922643 -10 5 -2.5 0.15 dme-miR-999-3p 6mer2-7 GTTAAC 3R 17688456 17688461 - 3R_17688456_17688461_- 0.767461529 0.970978615 0.869220072 0.143908321 osa FBtr0089582|FBtr0089581|FBtr0335025|FBtr0301487|FBtr0089583|FBtr0335024 17687816|17687816|17687816|17687816|17687816|17687816 17689817|17689817|17689817|17689817|17689817|17689817 3R - 17688369 17688492 3'utr osa FlyBase G52075.1 AAAAAATGAAACCCTAATGCTGTAATCTTATGTTAACTGTATTATTTGCTGGAAGTGCTGCTGCTTCGTTTTATTTTATATCGAACTTACTTAAGGCGTAAATGACAAGATAAATAATTAGGTT 45 17688475 0.978230577 17 43 376 0.924242424 1.785329835 0.242424242 0.311111111 0.53030303 45 5 0 61 3R:17688369-17688492 6 osa FBtr0089583|FBtr0335024|FBtr0335025|FBtr0301487|FBtr0089582|FBtr0089581 17687816|17687816|17687816|17687816|17687816|17687816 17689817|17689817|17689817|17689817|17689817|17689817 GTTAAC 6mer2-7 dme-miR-999-3p 3R - 17688425 17688489 3'utr osa FlyBase G39320.2 AAATGAAACCCTAATGCTGTAATCTTATGTTAACTGTATTATTTGCTGGAAGTGCTGCTGCTTCG 31 17688475 0.687210709 12 28 274 0.930232558 1.301029996 0.139534884 0.322580645 0.511627907 31 2 1 40 3R:17688425-17688489 6 19 2816 FBgn0261885 4320.86 50.56333333 77.47333333 0.004397273 0.375766366 0.245245676 14 14 14 0.15 dme-miR-305-3p 6mer3-8 ATGTGC 3R 17688989 17688994 - 3R_17688989_17688994_- 0.99049611 0.991564647 0.991030378 0.000755544 osa FBtr0089582|FBtr0089581|FBtr0335025|FBtr0301487|FBtr0089583|FBtr0335024 17687816|17687816|17687816|17687816|17687816|17687816 17689817|17689817|17689817|17689817|17689817|17689817 3R - 17688952 17689044 3'utr osa FlyBase G52079.1 GAGGATAGTTTTTAAATTCTACCACTTACTAATACCTACATATTACCACAATGTGCAGCATAGGAACTCATAAACTGATCGAACTGAACGAAC 131 17688993 0.949704923 11 129 625 0.980769231 1.707570176 0.038461538 0.167938931 0.301282051 131 1 2 153 3R:17688952-17689044 6 osa FBtr0089583|FBtr0335024|FBtr0335025|FBtr0301487|FBtr0089582|FBtr0089581 17687816|17687816|17687816|17687816|17687816|17687816 17689817|17689817|17689817|17689817|17689817|17689817 ATGTGC 6mer3-8 dme-miR-305-3p 3R - 17688952 17689014 3'utr osa FlyBase G39324.1 AATACCTACATATTACCACAATGTGCAGCATAGGAACTCATAAACTGATCGAACTGAACGAAC 84 17688992 0.811985864 7 81 385 0.971631206 2.136720567 0 0.416666667 0.65248227 84 4 0 137 3R:17688952-17689014 6 92 2817 FBgn0261885 4320.86 50.56333333 77.47333333 0.021292058 1.819500297 1.187505378 -1 -2 -1.5 0.15 dme-miR-305-3p 6mer3-8 ATGTGC 3R 17689613 17689618 - 3R_17689613_17689618_- 0.953415745 0.809213929 0.881314837 0.101966071 osa FBtr0089582|FBtr0089581|FBtr0335025|FBtr0301487|FBtr0089583|FBtr0335024 17687816|17687816|17687816|17687816|17687816|17687816 17689817|17689817|17689817|17689817|17689817|17689817 3R - 17689516 17689764 3'utr osa FlyBase G52082.3 AGTCGACTAAGCTGGCGTTCGGTGGTTGAACAGCGGGCCCAGGAGCAACTCCGAAGTGCAAGACCAGAAGATGATACCTGCATCCATGTGGGGTGGGCATGTAAATTTACTTAAGTATGGCGCCAAGAGAGAGAGAGAGAGTCACGATGTGCGAGAACTCGTGTCCGAACTCTAAGGATACGTAAACGGGAACTCAGCAGGTGCAGCGCCTGCAATGTATCTGCGATGGAATGGCTCGCCAATCCATCA 185 17689617 0.900458749 25 182 785 0.981220657 2.320146286 0.356807512 0.118918919 0.234741784 185 4 0 209 3R:17689516-17689764 6 osa FBtr0089583|FBtr0335024|FBtr0335025|FBtr0301487|FBtr0089582|FBtr0089581 17687816|17687816|17687816|17687816|17687816|17687816 17689817|17689817|17689817|17689817|17689817|17689817 ATGTGC 6mer3-8 dme-miR-305-3p 3R - 17689516 17689755 3'utr osa FlyBase G39328.1 AGCTGGCGTTCGGTGGTTGAACAGCGGGCCCAGGAGCAACTCCGAAGTGCAAGACCAGAAGATGATACCTGCATCCATGTGGGGTGGGCATGTAAATTTACTTAAGTATGGCGCCAAGAGAGAGAGAGAGAGTCACGATGTGCGAGAACTCGTGTCCGAACTCTAAGGATACGTAAACGGGAACTCAGCAGGTGCAGCGCCTGCAATGTATCTGCGATGGAATGGCTCGCCAATCCATCA 105 17689617 0.901254192 23 95 433 0.886227545 1.216019206 0.449101796 0.457142857 0.658682635 105 11 8 148 3R:17689516-17689755 6 72 2818 FBgn0261885 4320.86 50.56333333 77.47333333 0.016663349 1.423956754 0.929352035 -1 -1 -1 0.15 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 17803390 17803397 - 3R_17803390_17803397_- 0.375295658 0.371524876 0.373410267 0.002666358 CG17802 FBtr0083526 17803223 17803529 3R - 17803344 17803417 3'utr CG17802 FlyBase G52142.1 AAATATCATAAGATATCTGACTGTGATTTGGGTGTATCGATCAGTTTTGAAAGTGGATCTTTCATCCTCTTAAA 84 17803390 0.986174666 7 82 696 0.980392157 1.698970004 0.401960784 0.214285714 0.352941176 84 1 1 100 3R:17803344-17803417 8 CG17802 FBtr0083526 17803223 17803529 CTGTGATT 8mer-m1 dme-miR-308-3p 3R - 17803375 17803417 3'utr CG17802 FlyBase G39369.1 AAATATCATAAGATATCTGACTGTGATTTGGGTGTATCGATCA 73 17803390 0.700876462 5 70 602 0.955752212 2.033423755 0.442477876 0.397260274 0.610619469 73 5 0 108 3R:17803375-17803417 8 78 2819 FBgn0038549 243.33 17.45666667 26.79 0.320552336 4.468206989 2.911534155 -7 -7 -7 0.15 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3R 17809569 17809574 - 3R_17809569_17809574_- 0.889125769 0.938517358 0.913821563 0.034925135 CG18012 FBtr0332430 17809399 17810834 3R - 17809485 17809648 stop_codon CG18012 FlyBase G52153.1 TTCCAGGAGCTGCGATGGCGGGAGAGTTGGCGCCTGATCGCGGCCCCCGTACTGGAGGCATTTCTATAGAGCATTTTGACAAAGATTTGACAATTACACGTTATGAGAGACTTCCTTTGATTGCTAATCGCTTTTTCTAGGCTAGTTACTACAAATTCTGTACA 66 17809574 0.984063547 24 62 489 0.93902439 1.58546073 0.134146341 0.181818182 0.341463415 66 4 1 77 3R:17809485-17809648 6 CG18012 FBtr0332430 17809399 17810834 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3R - 17809461 17809621 stop_codon CG18012 FlyBase G39378.1 TGGCGCCTGATCGCGGCCCCCGTACTGGAGGCATTTCTATAGAGCATTTTGACAAAGATTTGACAATTACACGTTATGAGAGACTTCCTTTGATTGCTAATCGCTTTTTCTAGGCTAGTTACTACAAATTCTGTACACAAAAGAGCTTCAAACTTGCTTAT 59 17809574 0.964719723 25 56 422 0.965116279 1.919078092 0.127906977 0.372881356 0.569767442 59 3 0 83 3R:17809461-17809621 6 33 2820 FBgn0038552 964.0066667 73.48333333 112.6866667 0.034232128 0.449081424 0.292847424 0 0 0 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 17809699 17809705 - 3R_17809699_17809705_- 0.823264405 0.823307341 0.823285873 3.03E-05 CG18012 FBtr0332430 17809399 17810834 3R - 17809681 17809745 3'utr CG18012 FlyBase G52154.1 TCAGCTGGCCGAGCAGCTGAGGATTTGGTTCGAAAATTTTCCAAAGAATCCCAGCATCCTGGAGA 19 17809707 0.8401087 7 19 94 1 1.322219295 0.238095238 0.105263158 0.19047619 19 0 0 21 3R:17809681-17809745 7 CG18012 FBtr0332430 17809399 17810834 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 17809681 17809721 3'utr CG18012 FlyBase G39379.1 TTGGTTCGAAAATTTTCCAAAGAATCCCAGCATCCTGGAGA 11 17809708 0.678133153 3 9 60 0.75 1.079181246 0.125 0.363636364 0.5625 11 4 0 12 3R:17809681-17809721 7 13 2821 FBgn0038552 964.0066667 73.48333333 112.6866667 0.013485384 0.176910864 0.115364137 2 3 2.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 3R 17810339 17810346 - 3R_17810339_17810346_- 0.659811664 0.662386699 0.661099181 0.0018208 CG18012 FBtr0332430 17809399 17810834 3R - 17810220 17810409 5'utr CG18012 FlyBase G52158.1 AGTTCTGTATGATCGTGCGCCCGCGCAATTCCATCCCATCGACTTGACTCACAAGCACGAGCTGTACCTGAAGCTGGCCAAAGACTACCCACAGTTCCAGGCCAAGGACGCCGAACAATCCGATGTTCTGGAGGCCACCGCTCTTACCCAAAAGCTGGCCAGCGGTGTTGTGCAGTACAGACCACAGCGA 742 17810347 0.934530663 17 734 2772 0.989784336 2.639486489 0.114642452 0.150943396 0.284903519 742 8 1 872 3R:17810220-17810409 8 CG18012 FBtr0332430 17809399 17810834 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R - 17810268 17810405 5'utr CG18012 FlyBase G39381.1 CTGTATGATCGTGCGCCCGCGCAATTCCATCCCATCGACTTGACTCACAAGCACGAGCTGTACCTGAAGCTGGCCAAAGACTACCCACAGTTCCAGGCCAAGGACGCCGAACAATCCGATGTTCTGGAGGCCACCGCT 377 17810347 0.92399419 14 366 1278 0.976311337 2.460145817 0.116751269 0.395225464 0.614213198 377 13 1 577 3R:17810268-17810405 8 416 2822 FBgn0038552 964.0066667 73.48333333 112.6866667 0.431532285 5.661147653 3.691652369 1 1 1 0.15 dme-miR-184-3p 6mer2-7 CCGTCC 3R 17810744 17810749 - 3R_17810744_17810749_- 0.998630621 0.998108779 0.9983697 0.000368968 CG18012 FBtr0332430 17809399 17810834 3R - 17810708 17810799 5'utr CG18012 FlyBase G52161.1 AAGGCCTTTTGGCAGACGCTCAGTCTGCTGATGGCTCTCATCTCCATTGGCCGTCCCAGCTTCCTACTCGTCCAGAATCCGCCCGGCATTCC 63 17810752 0.97856051 10 60 427 0.961038961 1.86923172 0.025974026 0.174603175 0.324675325 63 3 0 74 3R:17810708-17810799 6 CG18012 FBtr0332430 17809399 17810834 CCGTCC 6mer2-7 dme-miR-184-3p 3R - 17810711 17810860 intron-5'utr CG18012 FlyBase G39382.1 AATCCACGAGCTAACTGCCGTCCCAGTGACGAACCTAACACCCAAACTGCGCCTGCTCTTCAAGGCCTTTTGGCAGACGCTCAGTCTGCTGATGGCTCTCATCTCCATTGGCCGTCCCAGCTTCCTACTCGTCCAGAATCCGCCCGGCAT 57 17810753 0.975184987 13 55 344 0.961038961 1.568201724 0.090909091 0.263157895 0.454545455 57 2 1 74 3R:17810711-17810860 6 43 2823 FBgn0038552 964.0066667 73.48333333 112.6866667 0.044605501 0.585166704 0.381589067 3 4 3.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 18023164 18023171 + 3R_18023164_18023171_+ 0.616398617 0.331774474 0.474086546 0.201259631 CG7785 FBtr0083539 18022826 18023689 3R + 18023135 18023210 3'utr CG7785 FlyBase G43675.1 TTTTAGTTATTCCTTTGCCATATTTCTTCTCTAGTCAAAAAGAAAAGTTCCCAAGCTGAATTCTATCTCACAACCA 15 18023159 0.988209255 8 13 134 0.866666667 1.113943352 0.333333333 0 0 15 2 0 13 3R:18023135-18023210 8 CG7785 FBtr0083539 18022826 18023689 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 18023122 18023175 3'utr CG7785 FlyBase G33013.1 ATTTTAGTTTTAGTTTTAGTTATTCCTTTGCCATATTTCTTCTCTAGTCAAAAA 7 18023158 0.992553353 5 5 70 0.727272727 0.903089987 0 0.428571429 0.636363636 7 3 0 8 3R:18023122-18023175 8 7.5 2824 FBgn0038564 104 7.253333333 11.1 0.072115385 1.034007353 0.675675676 5 6 5.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3R 18023353 18023359 + 3R_18023353_18023359_+ 0.63059495 0.606146195 0.618370572 0.017287842 CG7785 FBtr0083539 18022826 18023689 3R + 18023291 18023399 3'utr CG7785 FlyBase G43676.1 TAGTCGTAAAATGCACTGTTCTGTTCTCATTTAGACATCAGGTGTATAAACTTTGTAAACTCTCTAGTCCTTGCACTATCCAAACCGAAAGTATTTGTATAATTTTATT 71 18023361 0.828377223 10 67 581 0.914893617 0.980255942 0.234042553 0.253521127 0.436170213 71 0 8 86 3R:18023291-18023399 7 CG7785 FBtr0083539 18022826 18023689 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 18023302 18023390 3'utr CG7785 FlyBase G33014.1 TGCACTGTTCTGTTCTCATTTAGACATCAGGTGTATAAACTTTGTAAACTCTCTAGTCCTTGCACTATCCAAACCGAAAGTATTTGTAT 36 18023361 0.984854319 9 34 273 0.9375 1.051152522 0.291666667 0.25 0.4375 36 0 3 45 3R:18023302-18023390 7 45.5 2825 FBgn0038564 104 7.253333333 11.1 0.4375 6.272977941 4.099099099 -8 -8 -8 0.15 dme-miR-14-3p 6mer3-8 AAGACT 3R 18045381 18045386 - 3R_18045381_18045386_- 0.993686309 0.90930048 0.951493395 0.059669771 htl FBtr0083548|FBtr0083550|FBtr0083549 18045214|18045214|18045214 18045730|18045730|18045730 3R - 18045254 18045413 3'utr htl FlyBase G52166.1 GTATATGCGTAGTTCTAAGTTGAACTTAAGACTCGGTTGTATTTGCTGTTGTATTTCATATTGTACTGATCTTTGTAGTATTCGCAGTTTTATACTCGCTAAATTATACTCGTAGCCCATAAACATAAATGTTCTATCTTAGCGTTAGTTGCATGCCGCA 233 18045388 0.823965657 31 226 2282 0.971326165 2.432969291 0.254480287 0.158798283 0.297491039 233 8 0 271 3R:18045254-18045413 6 htl FBtr0083549|FBtr0083548|FBtr0083550 18045214|18045214|18045214 18045730|18045730|18045730 AAGACT 6mer3-8 dme-miR-14-3p 3R - 18045291 18045408 3'utr htl FlyBase G39386.1 TGCGTAGTTCTAAGTTGAACTTAAGACTCGGTTGTATTTGCTGTTGTATTTCATATTGTACTGATCTTTGTAGTATTCGCAGTTTTATACTCGCTAAATTATACTCGTAGCCCATAAA 182 18045388 0.822774116 27 168 1819 0.925795053 1.8162413 0.233215548 0.368131868 0.593639576 182 18 3 262 3R:18045291-18045408 6 84.5 2826 FBgn0010389 31.66666667 1.04 1.59 2.668421053 81.25 53.14465409 2 2 2 0.15 dme-miR-2a-2-5p 7mer-A1 GATGAGA 3R 18045707 18045713 - 3R_18045707_18045713_- 0.781229142 0.781438788 0.781333965 0.00014828 htl FBtr0083548|FBtr0083550|FBtr0083549 18045214|18045214|18045214 18045730|18045730|18045730 3R - 18045646 18045754 stop_codon htl FlyBase G52168.1 CTGCAGAAGTGGTGTAATTATTAAACGAATCAGGATCCTTAGATGAGATCAGGACAATTCAAGCCTGGTTTTTGAACCAAAGTCAAATTGTTAACTAGAGATTATGAAG 19 18045715 0.967657918 10 18 98 0.954545455 1.322219295 0.045454545 0.157894737 0.272727273 19 1 0 21 3R:18045646-18045754 7 htl FBtr0083549|FBtr0083548|FBtr0083550 18045214|18045214|18045214 18045730|18045730|18045730 GATGAGA 7mer-A1 dme-miR-2a-2-5p 3R - 18045677 18045723 3'utr htl FlyBase G39389.1 AGGATCCTTAGATGAGATCAGGACAATTCAAGCCTGGTTTTTGAACC 5 18045711 0.943060064 2 5 22 1 1 0 0.6 0.8 5 0 0 10 3R:18045677-18045723 7 4.5 2827 FBgn0010389 31.66666667 1.04 1.59 0.142105263 4.326923077 2.830188679 2 -2 0 0.15 dme-miR-184-5p 6mer3-8 TGATAA 3R 18179762 18179767 - 3R_18179762_18179767_- 0.999998772 0.999810521 0.999904647 0.000133148 cdm FBtr0083619|FBtr0336472 18179711|18179273 18179916|18179916 3R - 18179753 18179820 3'utr cdm FlyBase G52191.1 GTCAGCTCTGTAAATTGTCTCCAATTTTAACTTAAGTTCAAAAGTTCTCGACTTGATAAACTTTTATT 12 18179768 0.985539527 8 11 87 0.933333333 0.84509804 0.2 0.166666667 0.333333333 12 0 1 14 3R:18179753-18179820 6 cdm FBtr0083619|FBtr0336472 18179711|18179273 18179916|18179916 TGATAA 6mer3-8 dme-miR-184-5p 3R - 18179756 18179786 3'utr cdm FlyBase G39406.1 AGTTCAAAAGTTCTCGACTTGATAAACTTTT 6 18179768 0.733099961 3 5 41 1 0.954242509 0.111111111 0.5 0.666666667 6 0 0 9 3R:18179756-18179786 6 7 2828 FBgn0261532 596.8733333 20.49333333 31.33 0.011727781 0.341574496 0.223428024 1 1 1 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 18179860 18179865 - 3R_18179860_18179865_- 0.998453583 0.996696145 0.997574864 0.00124274 cdm FBtr0083619|FBtr0336472 18179711|18179273 18179916|18179916 3R - 18179851 18179899 3'utr cdm FlyBase G52192.1 AGTGGCCAAATGACATCTTTATCCATCCGGATTTTGATCTAGTTTCTAT 11 18179880 0.767583024 8 10 101 0.928571429 1.113943352 0.071428571 0.181818182 0.357142857 11 1 0 13 3R:18179851-18179899 6 cdm FBtr0083619|FBtr0336472 18179711|18179273 18179916|18179916 TGATCT 6mer3-8 dme-bantam-3p 3R - 18179837 18179927 stop_codon cdm FlyBase G39407.1 AGTTCCAGTGAAATGAGTGTATGCAATAAGTGGCCAAATGACATCTTTATCCATCCGGATTTTGATCTAGTTTCTATAATTGTATTTAGTT 11 18179865 0.993141179 7 9 108 0.846153846 1.041392685 0.076923077 0.090909091 0.230769231 11 2 0 11 3R:18179837-18179927 6 5.5 2829 FBgn0261532 596.8733333 20.49333333 31.33 0.009214685 0.268379961 0.17555059 15 0 7.5 0.15 dme-miR-8-3p 6mer2-7 AGTATT 3R 18192595 18192600 - 3R_18192595_18192600_- 0.999998947 0.999999845 0.999999396 6.36E-07 Ssdp FBtr0330051|FBtr0083612 18192492|18192492 18194983|18195175 3R - 18192573 18192653 3'utr Ssdp FlyBase G52208.1 AATGAAGGGAATACAAAACAAAAAACCGATTGAATATGGAATATGTTTAAATAAGTATTTTAGTGTTAATTATACAATTTA 22 18192594 0.987054277 7 22 191 1 1.397940009 0.28 0.136363636 0.24 22 0 0 25 3R:18192573-18192653 6 Ssdp FBtr0330051|FBtr0083612 18192492|18192492 18194983|18195175 AGTATT 6mer2-7 dme-miR-8-3p 3R - 18192580 18192609 3'utr Ssdp FlyBase G39418.1 GTTTAAATAAGTATTTTAGTGTTAATTATA 7 18192594 0.632720012 4 7 72 1 0.954242509 0.222222222 0.285714286 0.444444444 7 0 0 9 3R:18192580-18192609 6 10.5 2830 FBgn0011481 1276.61 30.31666667 46.89333333 0.008224908 0.346344145 0.223912425 -6 -6 -6 0.15 dme-miR-980-5p 6mer2-7 AAAAAC 3R 18192787 18192792 - 3R_18192787_18192792_- 0.645930229 0.999999997 0.822965113 0.250365157 Ssdp FBtr0330051|FBtr0083612 18192492|18192492 18194983|18195175 3R - 18192780 18192818 3'utr Ssdp FlyBase G52209.1 TTGAGCGTTTCAATTGCTGGATCTATAAAAACCACAAAC 16 18192804 0.969128584 5 15 114 1 1.230448921 0.470588235 0.066666667 0.176470588 15 0 0 17 3R:18192780-18192818 6 Ssdp FBtr0330051|FBtr0083612 18192492|18192492 18194983|18195175 AAAAAC 6mer2-7 dme-miR-980-5p 3R - 18192783 18192925 3'utr Ssdp FlyBase G39420.1 AAATTTATAGTATGTGCTGCATGAATTATATCTAAATTATAGTATGGAATGCAAGCGAAAAAACTTAAATAGTGACTAAGTTAAATTTATTTACTAACGCTTTGGGTTTGAGCGTTTCAATTGCTGGATCTATAAAAACCACA 23 18192804 0.978761285 14 23 167 1 1.477121255 0.2 0.217391304 0.4 23 0 0 30 3R:18192783-18192925 6 7.5 2831 FBgn0011481 1276.61 30.31666667 46.89333333 0.005874934 0.247388675 0.159937447 12 12 12 0.15 dme-miR-276a-3p 7mer-m8 AGTTCCT 3R 18193769 18193775 - 3R_18193769_18193775_- 0.631495007 0.631367156 0.631431082 9.04E-05 Ssdp FBtr0330051|FBtr0083612 18192492|18192492 18194983|18195175 3R - 18193722 18193803 3'utr Ssdp FlyBase G52215.1 AAACAACTAAAATGAAAATCGTTATTTAAGTTCCTTCCAAACGGCGAGCAATAATACCATTTGTATGGCATGAGCATGAGAT 38 18193773 0.983620513 7 37 286 0.977272727 1.33243846 0.227272727 0.131578947 0.25 38 0 1 43 3R:18193722-18193803 7 Ssdp FBtr0330051|FBtr0083612 18192492|18192492 18194983|18195175 AGTTCCT 7mer-m8 dme-miR-276a-3p 3R - 18193754 18193799 3'utr Ssdp FlyBase G39422.1 AACTAAAATGAAAATCGTTATTTAAGTTCCTTCCAAACGGCGAGCA 21 18193773 0.978717758 2 21 142 1 1.505149978 0.25 0.380952381 0.59375 21 0 0 32 3R:18193754-18193799 7 28 2832 FBgn0011481 1276.61 30.31666667 46.89333333 0.021933088 0.923584387 0.597099801 -2 -2 -2 0.15 dme-miR-980-3p 6mer3-8 GGCAGC 3R 18195120 18195125 - 3R_18195120_18195125_- 0.689539235 0.96471626 0.827127747 0.194579593 Ssdp FBtr0083612 18192492 18195175 3R - 18195073 18195203 stop_codon Ssdp FlyBase G52220.2 AGATCATCCGGACTACTTTATGCCATAACAACATCACCAGCAACAGCAGCAGCAGCATCAGCAGCATCTCAACACGGTGGCAGCCGCTGTGGCAGCTGTGGTGGCGGCTGCGGCGTCCAACGGATCGGCGG 91 18195126 0.960292627 10 82 381 0.910891089 1.486666573 0.089108911 0.076923077 0.168316832 91 7 2 92 3R:18195073-18195203 6 Ssdp FBtr0083612|FBtr0083611|FBtr0083613 18192492|18194858|18194858 18195175|18195175|18195175 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 18195085 18195145 3'utr Ssdp FlyBase G39431.1 CAGCAGCATCTCAACACGGTGGCAGCCGCTGTGGCAGCTGTGGTGGCGGCTGCGGCGTCCA 61 18195126 0.962652844 6 55 228 0.870967742 1.908485019 0.021505376 0.344262295 0.569892473 61 12 0 81 3R:18195085-18195145 6 66 2833 FBgn0011481 1276.61 30.31666667 46.89333333 0.051699423 2.177020341 1.407449531 1 1 1 0.15 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 3R 18239827 18239834 - 3R_18239827_18239834_- 0.674028349 0.674066744 0.674047547 2.72E-05 CG7156 FBtr0083606|FBtr0083607 18239418|18239418 18239891|18241598 3R - 18239771 18239871 3'utr CG7156 FlyBase G52239.2 GCTATTGAGTCCGTAAAGTATTTTCTTATTTCGTACTGTACCTGAAATCCCATTTGTGATTCCTTGCTCAGTTCTGATTGGCATTGATTTTGATTACTTTC 393 18239835 0.807096895 22 389 2966 0.992125984 2.702430536 0.035433071 0.226463104 0.401574803 393 4 0 504 3R:18239771-18239871 8 CG7156 FBtr0083606|FBtr0083607 18239418|18239418 18239891|18241598 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R - 18239706 18239877 3'utr CG7156 FlyBase G39446.1 TGCTTTGCTATTGAGTCCGTAAAGTATTTTCTTATTTCGTACTGTACCTGAAATCCCATTTGTGATTCCTTGCTCAGTTCTGATTGGCATTGATTTTGATTACTTTCAAAGAATCTGAAGTCGCTCCATAGCGATTAATTATGTTGTGAATCTGCTATATTATTTTCTATGC 265 18239835 0.983908563 21 260 2036 0.983827493 1.86332286 0.064690027 0.309433962 0.506738544 265 2 4 365 3R:18239706-18239877 8 302.5 2834 FBgn0038588 127.6666667 6.006666667 9.273333333 2.369451697 50.36071032 32.62041697 1 1 1 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 3R 18240719 18240724 - 3R_18240719_18240724_- 0.872013879 0.940054024 0.906033952 0.048111616 CG7156 FBtr0083607 18239418 18241598 3R - 18240686 18240746 5'utr CG7156 FlyBase G52242.1 GGAGGGCGGCATGTTGTACGATTACCTGCAGAGCTACACGCCCACGAGTAGTAAGAGTGTC 16 18240725 0.979900851 2 14 96 0.909090909 1 0.272727273 0.375 0.545454545 16 1 1 20 3R:18240686-18240746 6 CG7156 FBtr0083607 18239418 18241598 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 3R - 18240663 18240743 5'utr CG7156 FlyBase G39447.1 GGGCGGCATGTTGTACGATTACCTGCAGAGCTACACGCCCACGAGTAGTAAGAGTGTCAATTATGGAGAGCTTTTTCCCTC 9 18240725 0.978685947 5 8 54 0.933333333 0.84509804 0.533333333 0.333333333 0.6 9 0 1 14 3R:18240663-18240743 6 11 2835 FBgn0038588 127.6666667 6.006666667 9.273333333 0.08616188 1.831298557 1.186196981 1 1 1 0.15 dme-miR-184-3p 7mer-A1 CCGTCCA 3R 18241233 18241239 - 3R_18241233_18241239_- 0.817582955 0.818098061 0.817840508 0.000364231 CG7156 FBtr0083607 18239418 18241598 3R - 18241207 18241278 5'utr CG7156 FlyBase G52244.1 GCGACTACATATATGAGGCGGCTCTAGAGTTCAGTCATGCCGTCCAAGCGGAGGTTAACCTGGAGTATGCCG 79 18241241 0.848274654 5 76 419 0.95505618 1.929418926 0.359550562 0.126582278 0.224719101 79 4 0 85 3R:18241207-18241278 7 CG7156 FBtr0083607 18239418 18241598 CCGTCCA 7mer-A1 dme-miR-184-3p 3R - 18241197 18241265 5'utr CG7156 FlyBase G39449.1 TGAGGCGGCTCTAGAGTTCAGTCATGCCGTCCAAGCGGAGGTTAACCTGGAGTATGCCGAAGCCCACGA 35 18241241 0.966857282 4 32 168 0.918367347 1.176091259 0.224489796 0.285714286 0.489795918 35 2 2 45 3R:18241197-18241265 7 54 2836 FBgn0038588 127.6666667 6.006666667 9.273333333 0.422976501 8.990011099 5.823148814 2 2 2 0.15 dme-miR-33-5p 6mer3-8 CAATGC 3R 18248433 18248438 + 3R_18248433_18248438_+ 0.999719266 0.999996096 0.999857681 0.000195727 14-3-3epsilon FBtr0083565|FBtr0083567|FBtr0083568|FBtr0083566 18248287|18248287|18248287|18248287 18248579|18248579|18250550|18250279 3R + 18248390 18248441 3'utr 14-3-3epsilon FlyBase G43729.1 CAACAACAACACGACAACAACTTCAAGAACAACAACATGGAACCAATGCGGC 11 18248427 0.797135019 3 8 8 0.928571429 1.113943352 0.142857143 0.272727273 0.428571429 11 1 0 13 3R:18248390-18248441 6 14-3-3epsilon FBtr0083566|FBtr0083568|FBtr0083567|FBtr0083565 18248287|18248287|18248287|18248287 18250279|18250550|18248579|18248579 CAATGC 6mer3-8 dme-miR-33-5p 3R + 18248415 18248445 3'utr 14-3-3epsilon FlyBase G33047.1 AGAACAACAACATGGAACCAATGCGGCAACA 6 18248427 0.597286818 2 5 5 0.875 0.84509804 0 0.333333333 0.5 6 1 0 7 3R:18248415-18248445 6 6 2837 FBgn0020238 26098.09667 2256.556667 3469.193333 0.000229902 0.002658918 0.001729509 6 6 6 0.15 dme-miR-1006-3p 6mer2-7 GAATTT 3R 18248773 18248778 + 3R_18248773_18248778_+ 0.999483569 0.91007254 0.954778055 0.063223195 14-3-3epsilon FBtr0083568|FBtr0083566 18248287|18248287 18250550|18250279 3R + 18248702 18248773 3'utr 14-3-3epsilon FlyBase G43732.2 ATTAAGTTGGCGTCGCTTCGCAATTTGGCTCCTTAACGTTAGAAAACTGCAACATCAAGTCTACTACATTTG 18 18248762 0.745611948 12 16 115 0.95 1.278753601 0.2 0.111111111 0.2 18 1 0 19 3R:18248702-18248773 1 14-3-3epsilon FBtr0083566|FBtr0083568 18248287|18248287 18250279|18250550 GAATTT 6mer2-7 dme-miR-1006-3p 3R + 18248741 18248815 3'utr 14-3-3epsilon FlyBase G33050.1 TAGAAAACTGCAACATCAAGTCTACTACATTTGAATTTTTTGCATTCGAGAAACCAAGCATTTTATTATATTTGA 7 18248758 0.991670987 6 6 55 0.875 0.84509804 0.125 0.142857143 0.25 7 1 0 7 3R:18248741-18248815 6 2.5 2838 FBgn0020238 26098.09667 2256.556667 3469.193333 9.58E-05 0.001107883 0.000720629 11 15 13 0.15 dme-miR-980-3p 6mer3-8 GGCAGC 3R 18256341 18256346 + 3R_18256341_18256346_+ 0.851964478 0.99404537 0.923004924 0.100466368 moi FBtr0299938 18256210 18257677 3R + 18256314 18256368 3'utr moi FlyBase G43740.1 TTCAAAACGTTACCTGGAAAGAATTCTGGCAGCGTGAGGGGCATGAGCTGCTCGA 8 18256340 0.941656517 4 8 33 1 0.903089987 0.5 0 0 8 0 0 8 3R:18256314-18256368 6 moi FBtr0299938 18256210 18257677 GGCAGC 6mer3-8 dme-miR-980-3p 3R + 18256319 18256367 3'utr moi FlyBase G33055.1 AACGTTACCTGGAAAGAATTCTGGCAGCGTGAGGGGCATGAGCTGCTCG 6 18256340 0.930580219 2 6 26 1 0.84509804 0.857142857 0.166666667 0.285714286 6 0 0 7 3R:18256319-18256367 6 6 2839 FBgn0261019 238.14 13.89333333 21.31333333 0.025195263 0.431861804 0.281513919 1 1 1 0.15 dme-miR-34-5p 7mer-A1 ACTGCCA 3R 18256673 18256679 + 3R_18256673_18256679_+ 0.820226489 0.820384973 0.820305731 0.000112076 moi FBtr0299938 18256210 18257677 3R + 18256651 18256702 3'utr moi FlyBase G43742.1 AGAGGAGGACGAATCATACTTGACTGCCAACGACGATCCCGAGGATTGTGAC 21 18256670 0.954755784 5 20 93 0.956521739 1.041392685 0.086956522 0.095238095 0.173913043 21 0 1 22 3R:18256651-18256702 7 moi FBtr0299938 18256210 18257677 ACTGCCA 7mer-A1 dme-miR-34-5p 3R + 18256650 18256688 3'utr moi FlyBase G33056.1 AAGAGGAGGACGAATCATACTTGACTGCCAACGACGATC 9 18256670 0.939734668 3 9 36 1 1.301029996 0.3 0.555555556 0.8 9 0 0 20 3R:18256650-18256688 7 15 2840 FBgn0261019 238.14 13.89333333 21.31333333 0.062988158 1.079654511 0.703784798 3 3 3 0.15 dme-miR-8-3p 7mer-m8 CAGTATT 3R 18390505 18390511 - 3R_18390505_18390511_- 0.577926359 0.513964843 0.545945601 0.045227681 Vha100-2 FBtr0083656|FBtr0083657 18390321|18390321 18390624|18390624 3R - 18390446 18390527 3'utr Vha100-2 FlyBase G52289.1 ATTTTTTGGATATTGTCAGTATTGTGGTGCTCTTCCCACATTTTTGTATCCTCCGTTGTGTATTCCATTTGTAGTCAAAGTA 112 18390512 0.794389871 17 103 1249 0.912698413 2.06069784 0.30952381 0.098214286 0.198412698 112 11 0 115 3R:18390446-18390527 7 Vha100-2 FBtr0083657|FBtr0083656 18390321|18390321 18390624|18390624 CAGTATT 7mer-m8 dme-miR-8-3p 3R - 18390479 18390580 3'utr Vha100-2 FlyBase G39481.2 TACCCCCAGCCCGAACTATTTTGATTGTTTGTTAAATGTTTTTGTTTTGTTTAATTTTTTGGATATTGTCAGTATTGTGGTGCTCTTCCCACATTTTTGTAT 78 18390512 0.993026676 14 70 878 0.890909091 1.514104821 0.309090909 0.333333333 0.527272727 78 10 2 98 3R:18390479-18390580 7 88 2841 FBgn0028670 809.4533333 32.13666667 48.88333333 0.108715347 2.738305155 1.800204569 1 1 1 0.15 dme-miR-305-3p 6mer3-8 ATGTGC 3R 18390609 18390614 - 3R_18390609_18390614_- 0.955865743 0.960951129 0.958408436 0.003595921 Vha100-2 FBtr0083656|FBtr0083657 18390321|18390321 18390624|18390624 3R - 18390552 18390666 stop_codon Vha100-2 FlyBase G52290.1 TTCAGCTTCAAGGCCATTCTCGATGGCGAAGAGGAGGAGTAAACCCATCCAAATGTGCTCAAACTAGGGAAACGTGTATACAATTATACCCCCAGCCCGAACTATTTTGATTGTT 159 18390613 0.948550113 6 156 680 0.983050847 1.939519253 0.276836158 0.088050314 0.18079096 159 2 1 174 3R:18390552-18390666 6 Vha100-2 FBtr0083657|FBtr0083656 18390321|18390321 18390624|18390624 ATGTGC 6mer3-8 dme-miR-305-3p 3R - 18390586 18390642 stop_codon Vha100-2 FlyBase G39482.1 GGCGAAGAGGAGGAGTAAACCCATCCAAATGTGCTCAAACTAGGGAAACGTGTATAC 77 18390613 0.926793328 3 76 319 1 2.053078443 0.274336283 0.38961039 0.584070796 77 0 0 113 3R:18390586-18390642 6 113 2842 FBgn0028670 809.4533333 32.13666667 48.88333333 0.139600389 3.516232756 2.311626321 -1 -1 -1 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 3R 18400472 18400477 - 3R_18400472_18400477_- 0.999987225 0.999999999 0.999993612 9.05E-06 CG12333 FBtr0083655 18400371 18400826 3R - 18400421 18400569 3'utr CG12333 FlyBase G52310.1 TATCATTGTTATAGCATACGTATGTATATGCGTTGGGACTGGGCTAAACTCTTCGGAGTGCAGAGCTTCCGATGTCCAGACCCGATTTTATCTGTGTTTTACTACCATAATACATATTATAGACGTCTAAGGCATTAACGCTTTAGCCA 30 18400479 0.990918103 12 28 303 0.885714286 1.491361694 0.228571429 0.166666667 0.285714286 30 4 0 31 3R:18400421-18400569 6 CG12333 FBtr0083655 18400371 18400826 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 18400463 18400544 3'utr CG12333 FlyBase G39497.1 ATATGCGTTGGGACTGGGCTAAACTCTTCGGAGTGCAGAGCTTCCGATGTCCAGACCCGATTTTATCTGTGTTTTACTACCA 17 18400480 0.99169923 8 15 173 0.923076923 1.079181246 0.384615385 0.411764706 0.615384615 17 1 1 24 3R:18400463-18400544 6 16 2843 FBgn0038617 154.6666667 8.656666667 13.23 0.103448276 1.848286484 1.209372638 2 3 2.5 0.15 dme-miR-263a-5p 6mer2-7 TGCCAT 3R 18404478 18404483 + 3R_18404478_18404483_+ 0.986003537 0.954447907 0.970225722 0.022313179 koko FBtr0334146|FBtr0334148|FBtr0334149|FBtr0334147 18404444|18404444|18404444|18404444 18404726|18404726|18404726|18404726 3R + 18404416 18404491 stop_codon koko FlyBase G43770.1 AAGAACGAGGGCTTCCTGAATGCCACCTAATCGCTGAGAGAGACTGCCAAAACCATTCCTTCTGCCATCTGAACTT 7 18404471 0.963368552 5 7 38 1 1 0.2 0.285714286 0.5 7 0 0 10 3R:18404416-18404491 6 koko FBtr0334146|FBtr0334148|FBtr0334149|FBtr0334147 18404444|18404444|18404444|18404444 18404726|18404726|18404726|18404726 TGCCAT 6mer2-7 dme-miR-263a-5p 3R + 18404444 18404491 stop_codon koko FlyBase G33079.1 AATCGCTGAGAGAGACTGCCAAAACCATTCCTTCTGCCATCTGAACTT 6 18404471 0.723209429 4 6 31 1 0.954242509 0 0.5 0.666666667 6 0 0 9 3R:18404444-18404491 6 3 2844 FBgn0264816 41 4.086666667 6.296666667 0.073170732 0.734094617 0.476442562 7 7 7 0.15 dme-miR-1003-3p 7mer-A1 TGTGAGA 3R 18406767 18406773 - 3R_18406767_18406773_- 0.820383912 0.818871911 0.819627912 0.001069145 CG31122 FBtr0083653|FBtr0301432|FBtr0333831 18406629|18406629|18406062 18407464|18407881|18407881 3R - 18406751 18406794 3'utr CG31122 FlyBase G52315.1 CTGGGGGCAAAGTATCAAATTTGTGAGACGAGAGCGTCGATAGC 19 18406774 0.87305092 4 18 112 0.961538462 1.096910013 0.346153846 0.263157895 0.461538462 19 0 1 25 3R:18406751-18406794 7 CG31122 FBtr0333831|FBtr0301432|FBtr0083653 18406062|18406629|18406629 18407881|18407881|18407464 TGTGAGA 7mer-A1 dme-miR-1003-3p 3R - 18406748 18406789 3'utr CG31122 FlyBase G39502.1 GGCAAAGTATCAAATTTGTGAGACGAGAGCGTCGATAGCAAT 12 18406774 0.690453005 2 11 64 1 1.255272505 0.444444444 0.416666667 0.611111111 12 0 0 18 3R:18406748-18406789 7 15 2845 FBgn0051122 626.0666667 23.62 36.17666667 0.02395911 0.635055038 0.414631899 1 1 1 0.15 dme-miR-8-3p 7mer-A1 AGTATTA 3R 18406894 18406900 - 3R_18406894_18406900_- 0.818960763 0.813815755 0.816388259 0.003638064 CG31122 FBtr0083653|FBtr0301432|FBtr0333831 18406629|18406629|18406062 18407464|18407881|18407881 3R - 18406844 18406925 3'utr CG31122 FlyBase G52316.1 ACACACCCACAAAGCCCTCTGATTAAGTATTACTTAGCGTACGTAAGCTAACTTTAAGTTGCAACTGGCAAAAAGCAAGCCA 49 18406903 0.989206283 7 43 409 0.873015873 1.263241435 0.079365079 0.244897959 0.412698413 49 6 2 55 3R:18406844-18406925 7 CG31122 FBtr0333831|FBtr0301432|FBtr0083653 18406062|18406629|18406629 18407881|18407881|18407464 AGTATTA 7mer-A1 dme-miR-8-3p 3R - 18406865 18406988 3'utr CG31122 FlyBase G39503.1 CCAATGAATTTATACATCATCCGCACAGACGCATTAATCTAACCAGCCTAAAATCTAAATCACACACACCCACAAAGCCCTCTGATTAAGTATTACTTAGCGTACGTAAGCTAACTTTAAGTTG 35 18406903 0.985723309 12 33 260 0.96 1.681241237 0.02 0.285714286 0.5 35 2 0 48 3R:18406865-18406988 7 37 2846 FBgn0051122 626.0666667 23.62 36.17666667 0.059099137 1.566469094 1.022758684 3 3 3 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3R 18407070 18407076 - 3R_18407070_18407076_- 0.521223434 0.521223403 0.521223419 0 CG31122 FBtr0083653|FBtr0301432|FBtr0333831 18406629|18406629|18406062 18407464|18407881|18407881 3R - 18407015 18407147 3'utr CG31122 FlyBase G52318.1 GCTGATTTTACAGACCTCTCTTATTTTATACAAACACTCCATGCTATTTATTTGTAATTGATGAAAAGATTTGTGATTTGCGCACATGATATAAAGTAAACATCGTAGAGCAAGCACTGTAATCGTAGCGTGT 109 18407077 0.845944009 16 106 824 0.977272727 1.633468456 0.431818182 0.155963303 0.303030303 109 1 2 129 3R:18407015-18407147 7 CG31122 FBtr0333831|FBtr0301432|FBtr0083653 18406062|18406629|18406629 18407881|18407881|18407464 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 18407020 18407092 3'utr CG31122 FlyBase G39504.1 AATTGATGAAAAGATTTGTGATTTGCGCACATGATATAAAGTAAACATCGTAGAGCAAGCACTGTAATCGTAG 67 18407070 0.979814043 7 67 468 1 2.004321374 0.514851485 0.402985075 0.603960396 67 0 0 101 3R:18407020-18407092 7 79 2847 FBgn0051122 626.0666667 23.62 36.17666667 0.126184645 3.344623201 2.183728001 1 -6 -2.5 0.15 dme-miR-995-5p 6mer3-8 AATTCG 3R 18407244 18407249 - 3R_18407244_18407249_- 0.978205657 0.97273783 0.975471743 0.003866389 CG31122 FBtr0083653|FBtr0301432|FBtr0333831 18406629|18406629|18406062 18407464|18407881|18407881 3R - 18407184 18407259 3'utr CG31122 FlyBase G52319.1 GCATTTTTGTAATTCGTCCCAAACTGAAAGCAAAATCTCATCAGTGCAATAATATACATAATCCGAATATATATAT 18 18407247 0.985734683 5 15 134 0.80952381 1.230448921 0.142857143 0.166666667 0.285714286 18 4 0 17 3R:18407184-18407259 6 CG31122 FBtr0333831|FBtr0301432|FBtr0083653 18406062|18406629|18406629 18407881|18407881|18407464 AATTCG 6mer3-8 dme-miR-995-5p 3R - 18407217 18407276 3'utr CG31122 FlyBase G39505.1 TTGTATCTTTGATCATCGCATTTTTGTAATTCGTCCCAAACTGAAAGCAAAATCTCATCA 13 18407247 0.987769864 5 12 109 0.9375 1.176091259 0.0625 0.153846154 0.3125 13 1 0 15 3R:18407217-18407276 6 10 2848 FBgn0051122 626.0666667 23.62 36.17666667 0.01597274 0.423370025 0.276421266 -2 -2 -2 0.15 dme-miR-965-3p 7mer-m8 TACGCTT 3R 18407474 18407480 - 3R_18407474_18407480_- 0.620204855 0.620204755 0.620204805 7.07E-08 CG31122 FBtr0301432|FBtr0333831 18406629|18406062 18407881|18407881 3R - 18407307 18407517 3'utr CG31122 FlyBase G52320.1 AGTGTCGCTCGAAACGCAAACTGCAGAAATTGTATTATACGCTTTGCCGTTAGATCTGTAGCCTAACTATATCTATGTGTACTTGTACGAGAGAAAGTTTCTTAGAACCACCAGCAGCATCAGCACTTAGCTTAAGTGGAGTCACACCTACCACGTCCTATATATATTATATGTATGTCCAGTCCCTTCGTCCCTTCATTTTTTGTACATG 77 18407474 0.986065146 27 70 615 0.917647059 1.591064607 0.129411765 0.090909091 0.176470588 77 6 1 78 3R:18407307-18407517 7 CG31122 FBtr0333831|FBtr0301432 18406062|18406629 18407881|18407881 TACGCTT 7mer-m8 dme-miR-965-3p 3R - 18407349 18407525 3'utr CG31122 FlyBase G39506.1 TCATCATCAGTGTCGCTCGAAACGCAAACTGCAGAAATTGTATTATACGCTTTGCCGTTAGATCTGTAGCCTAACTATATCTATGTGTACTTGTACGAGAGAAAGTTTCTTAGAACCACCAGCAGCATCAGCACTTAGCTTAAGTGGAGTCACACCTACCACGTCCTATATATATTA 65 18407473 0.986390105 20 61 519 0.948453608 1.662757832 0.164948454 0.384615385 0.587628866 65 4 1 92 3R:18407349-18407525 7 42.5 2849 FBgn0051122 626.0666667 23.62 36.17666667 0.067884144 1.799322608 1.174790381 -6 -7 -6.5 0.15 dme-bantam-3p 7mer-m8 TGATCTC 3R 18407706 18407712 - 3R_18407706_18407712_- 0.661615011 0.661615186 0.661615098 1.41E-07 CG31122 FBtr0301432|FBtr0333831 18406629|18406062 18407881|18407881 3R - 18407662 18407776 3'utr CG31122 FlyBase G52321.1 CAGCAGCTGCTGGCTGCCGCCCCGGAGCTCGCGCTGGCCTCCTCATCGCGCCTGGCTGCGGCCCTGATCTCGTCGGCGGTGGCTCTGAGCGCCTCGTCCGCGAGCCTTGTAAATA 105 18407704 0.975645542 9 101 639 0.962962963 2.017033339 0.287037037 0.028571429 0.055555556 105 4 0 104 3R:18407662-18407776 7 CG31122 FBtr0333831|FBtr0301432 18406062|18406629 18407881|18407881 TGATCTC 7mer-m8 dme-bantam-3p 3R - 18407685 18407741 3'utr CG31122 FlyBase G39507.1 GGCCTCCTCATCGCGCCTGGCTGCGGCCCTGATCTCGTCGGCGGTGGCTCTGAGCGC 59 18407704 0.672863931 7 57 332 0.989130435 1.959041392 0.369565217 0.305084746 0.554347826 59 1 0 91 3R:18407685-18407741 7 77.5 2850 FBgn0051122 626.0666667 23.62 36.17666667 0.123788734 3.281117697 2.142264812 -8 -8 -8 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 18414739 18414744 - 3R_18414739_18414744_- 0.946704985 0.984205267 0.965455126 0.026516716 fru FBtr0083644 18414271 18416776 3R - 18414733 18414768 3'utr fru FlyBase G52329.1 CCACTACTACACACAGATTTATGTACCAAAAATGTA 12 18414746 0.796212113 3 11 72 0.923076923 1.079181246 0 0.083333333 0.153846154 12 1 0 12 3R:18414733-18414768 6 fru FBtr0083644 18414271 18416776 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 18414731 18414792 3'utr fru FlyBase G39512.1 AAATAGCACAGATGTTAAGGCAAACCACTACTACACACAGATTTATGTACCAAAAATGTAAT 8 18414748 0.970654933 7 8 46 1 1.041392685 0 0.25 0.454545455 8 0 0 11 3R:18414731-18414792 6 8 2851 FBgn0004652 1186.113333 24.98 38.30666667 0.006744718 0.320256205 0.208840933 2 4 3 0.15 dme-miR-283-5p 8mer-m1 TGATATTT 3R 18415187 18415194 - 3R_18415187_18415194_- 0.459169998 0.483927073 0.471548535 0.017505913 fru FBtr0083644 18414271 18416776 3R - 18415174 18415210 3'utr fru FlyBase G52333.1 AATATAAAATTAAATGTGATATTTTCGGCACAAAACT 8 18415188 0.981056465 5 6 71 0.727272727 0.602059991 0 0.25 0.454545455 8 2 1 8 3R:18415174-18415210 8 fru FBtr0083644 18414271 18416776 TGATATTT 8mer-m1 dme-miR-283-5p 3R - 18415181 18415217 3'utr fru FlyBase G39515.1 AATATAAAATATAAAATTAAATGTGATATTTTCGGCA 11 18415187 0.650741089 6 11 98 1 1.176091259 0 0.272727273 0.466666667 11 0 0 15 3R:18415181-18415217 8 9.5 2852 FBgn0004652 1186.113333 24.98 38.30666667 0.008009353 0.380304243 0.247998608 -6 -7 -6.5 0.15 dme-miR-33-5p 6mer2-7 AATGCA 3R 18415838 18415843 - 3R_18415838_18415843_- 0.506991437 0.871967786 0.689479612 0.258077287 fru FBtr0083641|FBtr0083644 18415471|18414271 18416776|18416776 3R - 18415773 18416033 3'utr fru FlyBase G52338.1 GAGGATCAGGATGAGGATCAGCCAGCACAGCAACAGTCACCCACAAATACTACTCATACGAAGGTCACATTAGGTTTTAGTTTACTTTAATTTGTAATGTCTAGATTTTAGTGTTAACCGATATGTTCTGCGGAGTAGGAAACGGATGAGGGCTACTCAACCAACTACAAAGAAATTTTCATATACCTCAAATGCATTTCAGTTTTATTGTTGATTGCTTTAATTTTAGTCTACGTAGTCAGTTAGCACTTATACATAAAG 95 18415838 0.984839239 30 87 701 0.916666667 1.51851394 0.203703704 0.127659574 0.240740741 94 7 2 99 3R:18415773-18416033 6 fru FBtr0083644|FBtr0083641 18414271|18415471 18416776|18416776 AATGCA 6mer2-7 dme-miR-33-5p 3R - 18415814 18415933 3'utr fru FlyBase G39520.2 CTAGATTTTAGTGTTAACCGATATGTTCTGCGGAGTAGGAAACGGATGAGGGCTACTCAACCAACTACAAAGAAATTTTCATATACCTCAAATGCATTTCAGTTTTATTGTTGATTGCTT 53 18415839 0.963084463 14 50 360 0.917808219 1.826074803 0.219178082 0.339622642 0.520547945 53 6 0 67 3R:18415814-18415933 6 20.5 2853 FBgn0004652 1186.113333 24.98 38.30666667 0.01728334 0.820656525 0.53515489 -5 -4 -4.5 0.15 dme-miR-2a-2-5p 7mer-m1 GATGAGG 3R 18415883 18415889 - 3R_18415883_18415889_- 0.825423566 0.805519597 0.815471582 0.014074253 fru FBtr0083641|FBtr0083644 18415471|18414271 18416776|18416776 3R - 18415773 18416033 3'utr fru FlyBase G52338.1 GAGGATCAGGATGAGGATCAGCCAGCACAGCAACAGTCACCCACAAATACTACTCATACGAAGGTCACATTAGGTTTTAGTTTACTTTAATTTGTAATGTCTAGATTTTAGTGTTAACCGATATGTTCTGCGGAGTAGGAAACGGATGAGGGCTACTCAACCAACTACAAAGAAATTTTCATATACCTCAAATGCATTTCAGTTTTATTGTTGATTGCTTTAATTTTAGTCTACGTAGTCAGTTAGCACTTATACATAAAG 95 18415906 0.984839239 30 87 701 0.916666667 1.51851394 0.203703704 0.127659574 0.240740741 94 7 2 99 3R:18415773-18416033 7 fru FBtr0083644|FBtr0083641 18414271|18415471 18416776|18416776 GATGAGG 7mer-m1 dme-miR-2a-2-5p 3R - 18415814 18415933 3'utr fru FlyBase G39520.2 CTAGATTTTAGTGTTAACCGATATGTTCTGCGGAGTAGGAAACGGATGAGGGCTACTCAACCAACTACAAAGAAATTTTCATATACCTCAAATGCATTTCAGTTTTATTGTTGATTGCTT 53 18415905 0.963084463 14 50 360 0.917808219 1.826074803 0.219178082 0.339622642 0.520547945 53 6 0 67 3R:18415814-18415933 7 13 2854 FBgn0004652 1186.113333 24.98 38.30666667 0.010960167 0.520416333 0.339366516 17 16 16.5 0.15 dme-miR-31a-5p 6mer3-8 TCTTGC 3R 18416530 18416535 - 3R_18416530_18416535_- 0.778970927 0.71496727 0.746969098 0.04525738 fru FBtr0083641|FBtr0083644 18415471|18414271 18416776|18416776 3R - 18416507 18416561 3'utr fru FlyBase G52342.1 AATCGCTGCAGTTCTAGGTGGATTTTTCTTGCATTTAGTCGTCGTCCAGTCGTGT 32 18416533 0.907746261 5 32 390 1 1.556302501 0.277777778 0.09375 0.194444444 32 0 0 36 3R:18416507-18416561 6 fru FBtr0083644|FBtr0083641 18414271|18415471 18416776|18416776 TCTTGC 6mer3-8 dme-miR-31a-5p 3R - 18416491 18416546 3'utr fru FlyBase G39525.1 AGGTGGATTTTTCTTGCATTTAGTCGTCGTCCAGTCGTGTACATTACCCACTAGCT 17 18416533 0.993504078 2 16 195 0.956521739 1.342422681 0.695652174 0.294117647 0.47826087 17 1 0 22 3R:18416491-18416546 6 23.5 2855 FBgn0004652 1186.113333 24.98 38.30666667 0.019812609 0.940752602 0.61347024 -2 -2 -2 0.15 dme-miR-79-3p 7mer-A1 AGCTTTA 3R 18416733 18416739 - 3R_18416733_18416739_- 0.823349562 0.821267482 0.822308522 0.001472267 fru FBtr0083641|FBtr0083644 18415471|18414271 18416776|18416776 3R - 18416728 18416777 stop_codon fru FlyBase G52343.1 AGGGCGTGGCCGGGGCCCAAGTGCAGCCCATCACCGCCAGCTTTACCAGC 10 18416747 0.836871863 3 10 26 1 1.079181246 0.166666667 0.2 0.333333333 10 0 0 12 3R:18416728-18416777 7 fru FBtr0083644|FBtr0083641 18414271|18415471 18416776|18416776 AGCTTTA 7mer-A1 dme-miR-79-3p 3R - 18416724 18416758 3'utr fru FlyBase G39526.1 AGTGCAGCCCATCACCGCCAGCTTTACCAGCAGCA 6 18416747 0.821158962 3 5 16 0.875 0.84509804 0 0.333333333 0.5 6 1 0 7 3R:18416724-18416758 7 5 2856 FBgn0004652 1186.113333 24.98 38.30666667 0.004215449 0.200160128 0.130525583 8 8 8 0.15 dme-miR-92b-3p 8mer-A1 GTGCAATA 3R 18419914 18419921 - 3R_18419914_18419921_- 0.594651338 0.618471019 0.606561179 0.016843071 fru FBtr0330040|FBtr0083640|FBtr0083650|FBtr0083645 18418714|18418714|18418714|18418714 18422076|18422637|18422637|18422637 3R - 18419865 18419935 3'utr fru FlyBase G52347.1 GAATCGTATCGTATGTGCAATATGACTAGTTTTCGTTTAAGGTGCAGGAGGATGGATAATGGATGATGAAT 8 18419922 0.980097056 4 8 55 1 0.954242509 0.111111111 0.125 0.222222222 8 0 0 9 3R:18419865-18419935 8 fru FBtr0083650|FBtr0083645|FBtr0083640|FBtr0330040 18418714|18418714|18418714|18418714 18422637|18422637|18422637|18422076 GTGCAATA 8mer-A1 dme-miR-92b-3p 3R - 18419893 18419931 3'utr fru FlyBase G39528.1 CGTATCGTATGTGCAATATGACTAGTTTTCGTTTAAGGT 9 18419922 0.942952494 4 9 60 1 1.255272505 0.166666667 0.555555556 0.777777778 9 0 0 18 3R:18419893-18419931 8 7.5 2857 FBgn0004652 1186.113333 24.98 38.30666667 0.006323173 0.300240192 0.195788375 1 1 1 0.15 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 3R 18419992 18419999 - 3R_18419992_18419999_- 0.625196937 0.624985892 0.625091415 0.0001492 fru FBtr0330040|FBtr0083640|FBtr0083650|FBtr0083645 18418714|18418714|18418714|18418714 18422076|18422637|18422637|18422637 3R - 18419937 18420034 3'utr fru FlyBase G52348.1 TCGAAAGAATTCTATCATTTGTGTGGTATGCAAAATGGTGCTAAATCCAAATATACTTTAAAGTATACCGAGTAGAACGAGAGGAGGCCAGTACTCCT 68 18419999 0.981125282 10 65 467 0.948051948 1.86332286 0.337662338 0.132352941 0.233766234 68 4 0 73 3R:18419937-18420034 8 fru FBtr0083650|FBtr0083645|FBtr0083640|FBtr0330040 18418714|18418714|18418714|18418714 18422637|18422637|18422637|18422076 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 3R - 18419975 18420023 3'utr fru FlyBase G39529.1 CTATCATTTGTGTGGTATGCAAAATGGTGCTAAATCCAAATATACTTTA 32 18419999 0.885883284 4 31 215 0.975 1.591064607 0.275 0.21875 0.375 32 1 0 39 3R:18419975-18420023 8 45.5 2858 FBgn0004652 1186.113333 24.98 38.30666667 0.038360584 1.821457166 1.187782805 0 0 0 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 18420163 18420169 - 3R_18420163_18420169_- 0.745229167 0.742735713 0.74398244 0.001763171 fru FBtr0330040|FBtr0330040|FBtr0330040|FBtr0083640|FBtr0083640|FBtr0083640|FBtr0083650|FBtr0083650|FBtr0083650|FBtr0083645|FBtr0083645|FBtr0083645 18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714 18422076|18422076|18422076|18422637|18422637|18422637|18422637|18422637|18422637|18422637|18422637|18422637 3R - 18420146 18420223 3'utr fru FlyBase G52350.1 ATTTTTAACGCTGTTTTGTTAAACAAAAATTTAAGAAATTTATCTATTATATGATGTGATAACTATAGTAAAACTAAA 38 18420172 0.651270559 12 30 348 0.840909091 1.568201724 0.045454545 0.105263158 0.227272727 38 7 0 37 3R:18420146-18420223 7 fru FBtr0083650|FBtr0083650|FBtr0083650|FBtr0083645|FBtr0083645|FBtr0083645|FBtr0083640|FBtr0083640|FBtr0083640|FBtr0330040|FBtr0330040|FBtr0330040 18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714 18422637|18422637|18422637|18422637|18422637|18422637|18422637|18422637|18422637|18422076|18422076|18422076 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 18420146 18420191 3'utr fru FlyBase G39531.1 AAGAAATTTATCTATTATATGATGTGATAACTATAGTAAAACTAAA 34 18420172 0.622556018 8 29 299 0.823529412 1.021189299 0 0.382352941 0.588235294 34 6 3 42 3R:18420146-18420191 7 32 2859 FBgn0004652 1186.113333 24.98 38.30666667 0.026978872 1.28102482 0.835363731 3 3 3 0.15 dme-miR-34-5p 6mer2-7 ACTGCC 3R 18420250 18420255 - 3R_18420250_18420255_- 0.540229616 0.806708533 0.673469074 0.188429037 fru FBtr0330040|FBtr0083640|FBtr0083650|FBtr0083645 18418714|18418714|18418714|18418714 18422076|18422637|18422637|18422637 3R - 18420241 18420272 3'utr fru FlyBase G52350.2 ATAATGCTACATCAAATACTGCCCCCGACTTA 24 18420256 0.806921699 4 18 118 0.8 1 0.08 0.041666667 0.08 24 4 1 20 3R:18420241-18420272 6 fru FBtr0083650|FBtr0083645|FBtr0083640|FBtr0330040 18418714|18418714|18418714|18418714 18422637|18422637|18422637|18422076 ACTGCC 6mer2-7 dme-miR-34-5p 3R - 18420238 18420311 3'utr fru FlyBase G39532.1 CTTAACATGAAATGTTTAGGAATTAAATTTACATTATTAATAATGCTACATCAAATACTGCCCCCGACTTAATG 19 18420256 0.98587592 9 15 121 0.741935484 1.361727836 0.290322581 0.421052632 0.64516129 19 8 0 23 3R:18420238-18420311 6 18.5 2860 FBgn0004652 1186.113333 24.98 38.30666667 0.01559716 0.740592474 0.482944657 1 1 1 0.15 dme-miR-12-5p 6mer2-7 ATACTC 3R 18421268 18421273 - 3R_18421268_18421273_- 0.986328743 0.973607251 0.979967997 0.008995388 fru FBtr0330040|FBtr0083640|FBtr0083650|FBtr0083645 18418714|18418714|18418714|18418714 18422076|18422637|18422637|18422637 3R - 18421256 18421288 3'utr fru FlyBase G52355.1 CCGGAAACCACTCTGATACTCTATAGGAAATGA 19 18421275 0.73834928 3 18 90 0.956521739 1.342422681 0.260869565 0.210526316 0.347826087 19 1 0 22 3R:18421256-18421288 6 fru FBtr0083650|FBtr0083645|FBtr0083640|FBtr0330040 18418714|18418714|18418714|18418714 18422637|18422637|18422637|18422076 ATACTC 6mer2-7 dme-miR-12-5p 3R - 18421256 18421292 3'utr fru FlyBase G39535.1 CCACCCGGAAACCACTCTGATACTCTATAGGAAATGA 7 18421275 0.969082126 2 6 35 0.857142857 0.77815125 0.142857143 0 0 7 1 0 6 3R:18421256-18421292 6 12.5 2861 FBgn0004652 1186.113333 24.98 38.30666667 0.010538622 0.50040032 0.326313958 2 2 2 0.15 dme-miR-12-5p 7mer-A1 ATACTCA 3R 18422039 18422045 - 3R_18422039_18422045_- 0.823203076 0.823203256 0.823203166 1.41E-07 fru FBtr0330040|FBtr0083640|FBtr0083650|FBtr0083645 18418714|18418714|18418714|18418714 18422076|18422637|18422637|18422637 3R - 18422015 18422075 3'utr fru FlyBase G52356.1 AACAGCAACAGCAGCAACAGCAACCAATTGATACTCAAAGCAAATGTAATTTAGACGAGAA 351 18422047 0.909494402 5 347 1100 0.990498812 2.620136055 0.042755344 0.179487179 0.315914489 351 4 0 417 3R:18422015-18422075 7 fru FBtr0083650|FBtr0083645|FBtr0083640|FBtr0330040 18418714|18418714|18418714|18418714 18422637|18422637|18422637|18422076 ATACTCA 7mer-A1 dme-miR-12-5p 3R - 18422022 18422072 3'utr fru FlyBase G39536.1 AGCAACAGCAGCAACAGCAACCAATTGATACTCAAAGCAAATGTAATTTAG 195 18422047 0.913703431 5 189 614 0.971061093 2.178976947 0.064308682 0.41025641 0.63022508 195 8 1 302 3R:18422022-18422072 7 271.5 2862 FBgn0004652 1186.113333 24.98 38.30666667 0.228898869 10.86869496 7.087539158 2 2 2 0.15 dme-miR-2a-2-5p 7mer-m1 GATGAGG 3R 18422332 18422338 - 3R_18422332_18422338_- 0.552982304 0.534685849 0.543834076 0.012937579 fru FBtr0083640|FBtr0083650|FBtr0083645 18418714|18418714|18418714 18422637|18422637|18422637 3R - 18422284 18422373 3'utr fru FlyBase G52358.1 GATGAGAGCGACAATGAGCTGGAGGAGGAGCAGCAGATGAGGCTGAGCTTTGAGCGGTACATGGAGCAGCTGAAGCAGCTGGCGCCCTAC 44 18422336 0.998854242 4 44 158 1 1.707570176 0.31372549 0.136363636 0.254901961 44 0 0 51 3R:18422284-18422373 7 fru FBtr0083650|FBtr0083645|FBtr0083640 18418714|18418714|18418714 18422637|18422637|18422637 GATGAGG 7mer-m1 dme-miR-2a-2-5p 3R - 18422316 18422360 3'utr fru FlyBase G39538.1 ATGAGCTGGAGGAGGAGCAGCAGATGAGGCTGAGCTTTGAGCGGT 18 18422336 0.982729511 2 18 68 1 1.431363764 0.259259259 0.388888889 0.592592593 18 0 0 27 3R:18422316-18422360 7 29.5 2863 FBgn0004652 1186.113333 24.98 38.30666667 0.024871148 1.180944756 0.77010094 -2 -2 -2 0.15 dme-miR-980-3p 8mer-A1 GGCAGCTA 3R 18431318 18431325 - 3R_18431318_18431325_- 0.668726534 0.668728447 0.668727491 1.34E-06 fru FBtr0083647 18431231 18431446 3R - 18431303 18431350 5'utr fru FlyBase G52369.1 AATATATTTAGTAACCTAAGAACTTGGCAGCTACTATGAACAAAAGCA 119 18431326 0.83458356 6 115 727 0.95035461 1.826074803 0.014184397 0.168067227 0.29787234 119 6 1 134 3R:18431303-18431350 8 fru FBtr0083647 18431231 18431446 GGCAGCTA 8mer-A1 dme-miR-980-3p 3R - 18431303 18431350 5'utr fru FlyBase G39543.1 AATATATTTAGTAACCTAAGAACTTGGCAGCTACTATGAACAAAAGCA 63 18431326 0.819567414 6 61 363 0.968421053 1.963787827 0.063157895 0.333333333 0.557894737 63 3 0 92 3R:18431303-18431350 8 91 2864 FBgn0004652 1186.113333 24.98 38.30666667 0.076721168 3.642914331 2.375565611 1 1 1 0.15 dme-miR-92b-3p 8mer-A1 GTGCAATA 3R 18650739 18650746 - 3R_18650739_18650746_- 0.625565254 0.628915903 0.627240578 0.002369232 CG31224 FBtr0344327|FBtr0083691|FBtr0344326 18650119|18650119|18650119 18651140|18651140|18651140 3R - 18650702 18650770 3'utr CG31224 FlyBase G52400.1 TAGTAAAATGTTATACCTAGTTCAGTGCAATATACATCGATTAAATACTATATGCCGCGATACTTTTTC 16 18650750 0.767806301 6 15 119 0.952380952 1.301029996 0.047619048 0.1875 0.380952381 16 1 0 20 3R:18650702-18650770 8 CG31224 FBtr0344326|FBtr0083691|FBtr0344327 18650119|18650119|18650119 18651140|18651140|18651140 GTGCAATA 8mer-A1 dme-miR-92b-3p 3R - 18650733 18650761 3'utr CG31224 FlyBase G39567.1 GTTATACCTAGTTCAGTGCAATATACATC 8 18650749 0.668143395 5 7 51 0.818181818 0.954242509 0.090909091 0.25 0.454545455 8 2 0 9 3R:18650733-18650761 8 9.5 2865 FBgn0051224 1247.72 20.83666667 31.93333333 0.007613888 0.455927052 0.297494781 4 3 3.5 0.15 dme-miR-7-5p 6mer2-7 TCTTCC 3R 18650839 18650844 - 3R_18650839_18650844_- 0.998847772 0.99963169 0.999239731 0.000554301 CG31224 FBtr0344327|FBtr0083691|FBtr0344326 18650119|18650119|18650119 18651140|18651140|18651140 3R - 18650782 18650875 3'utr CG31224 FlyBase G52401.1 ACGTAGCTAAATGTGAAAGTGTTCCCCATTCTCTTCCTCCGGATTCGAATCACAATTCGCGTCAACCGCTTTAATCCCGTTTAGGTTTTAGATT 22 18650842 0.985943217 9 21 182 0.958333333 1.361727836 0.291666667 0.090909091 0.166666667 22 1 0 23 3R:18650782-18650875 6 CG31224 FBtr0344326|FBtr0083691|FBtr0344327 18650119|18650119|18650119 18651140|18651140|18651140 TCTTCC 6mer2-7 dme-miR-7-5p 3R - 18650782 18650861 3'utr CG31224 FlyBase G39568.1 GAAAGTGTTCCCCATTCTCTTCCTCCGGATTCGAATCACAATTCGCGTCAACCGCTTTAATCCCGTTTAGGTTTTAGATT 10 18650844 0.982479117 8 10 79 1 1.146128036 0.071428571 0.3 0.5 10 0 0 14 3R:18650782-18650861 6 10 2866 FBgn0051224 1247.72 20.83666667 31.93333333 0.008014619 0.479923212 0.313152401 -2 0 -1 0.15 dme-miR-8-3p 7mer-A1 AGTATTA 3R 18650998 18651004 - 3R_18650998_18651004_- 0.821266202 0.813128831 0.817197516 0.005754011 CG31224 FBtr0344327|FBtr0083691|FBtr0344326 18650119|18650119|18650119 18651140|18651140|18651140 3R - 18650947 18651095 3'utr CG31224 FlyBase G52402.1 ATATAATCATTACCTAGGTAGTTGTTCATGACTCTTCTATGTGTGTACTGTGTGTGTCTGTGGTTAAAACAACAAAACAAAACAACAAATTAGTATTACCTATCGAACTATATATTTAGTTAACATATGCGATTGCCAATTCTTGTTGA 51 18651006 0.953493428 21 45 417 0.9 1.73239376 0.1 0.156862745 0.283333333 51 6 0 54 3R:18650947-18651095 7 CG31224 FBtr0344326|FBtr0083691|FBtr0344327 18650119|18650119|18650119 18651140|18651140|18651140 AGTATTA 7mer-A1 dme-miR-8-3p 3R - 18650933 18651093 3'utr CG31224 FlyBase G39569.1 ATAATCATTACCTAGGTAGTTGTTCATGACTCTTCTATGTGTGTACTGTGTGTGTCTGTGGTTAAAACAACAAAACAAAACAACAAATTAGTATTACCTATCGAACTATATATTTAGTTAACATATGCGATTGCCAATTCTTGTTGATTAAACCAACAAGA 27 18651006 0.987107022 18 25 229 0.953488372 1.612783857 0.069767442 0.37037037 0.604651163 27 2 0 41 3R:18650933-18651093 7 9 2867 FBgn0051224 1247.72 20.83666667 31.93333333 0.007213157 0.431930891 0.281837161 2 2 2 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 18665277 18665283 + 3R_18665277_18665283_+ 0.801969113 0.801940468 0.80195479 2.02E-05 Gos28 FBtr0083661|FBtr0083661|FBtr0083661 18665169|18665169|18665169 18665307|18665307|18665307 3R + 18665237 18665301 3'utr Gos28 FlyBase G43803.1 TTAGTTTGTTTTTTCCGACGGTATATGTGTATGATTAACTTGTGATAGCAATAAAATGTACTATA 67 18665274 0.66452229 13 61 524 0.898734177 1.374137094 0.063291139 0.164179104 0.291139241 67 6 2 71 3R:18665237-18665301 7 Gos28 FBtr0083661|FBtr0083661|FBtr0083661 18665169|18665169|18665169 18665307|18665307|18665307 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 18665251 18665302 3'utr Gos28 FlyBase G33101.1 CCGACGGTATATGTGTATGATTAACTTGTGATAGCAATAAAATGTACTATAT 32 18665276 0.671890215 8 28 253 0.888888889 0.903089987 0 0.34375 0.533333333 32 1 4 40 3R:18665251-18665302 7 44.5 2868 FBgn0044871 146.6666667 20.69333333 31.63666667 0.303409091 2.150451031 1.406595722 3 1 2 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 18674633 18674640 + 3R_18674633_18674640_+ 0.500120291 0.500107133 0.500113712 9.33E-06 CG7702 FBtr0083665|FBtr0083664 18674410|18674410 18674679|18674679 3R + 18674606 18674648 3'utr CG7702 FlyBase G43809.1 TAGTGAAGCCATCGATGTTTGTGTATTGTACTTAAGATCCGCA 9 18674632 0.961283387 6 9 82 1 1.041392685 0.090909091 0.111111111 0.272727273 9 0 0 11 3R:18674606-18674648 8 CG7702 FBtr0083665|FBtr0083664 18674410|18674410 18674679|18674679 GTACTTAA 8mer-A1 dme-miR-252-5p 3R + 18674610 18674648 3'utr CG7702 FlyBase G33103.1 GAAGCCATCGATGTTTGTGTATTGTACTTAAGATCCGCA 6 18674632 0.988110251 3 5 56 1 1 0 0.333333333 0.6 6 0 0 10 3R:18674610-18674648 8 6.5 2869 FBgn0038638 520.81 26.77666667 41.05 0.012480559 0.242748662 0.158343484 1 1 1 0.15 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 18759343 18759350 - 3R_18759343_18759350_- 0.381929804 0.380482003 0.381205903 0.001023749 CG7720 FBtr0083679|FBtr0301200|FBtr0301199|FBtr0339167|FBtr0301201|FBtr0083678 18759234|18759234|18759234|18759234|18759234|18759234 18759467|18759467|18759467|18759467|18759467|18759467 3R - 18759261 18759378 3'utr CG7720 FlyBase G52513.1 AGCCAAGTGTTTCATGTCTATAAAGATGCTGTGATTTTCTGTGCGCGACTGTTGTTGAGCAATTGCTCGCGCATTTCATTCGCATGTACTTAACGCATATGTGTGTGCGTGTCAGCAT 93 18759352 0.858397016 14 89 865 0.964285714 2.033423755 0.080357143 0.193548387 0.330357143 93 4 0 108 3R:18759261-18759378 8 CG7720 FBtr0301201|FBtr0083678|FBtr0301199|FBtr0339167|FBtr0083679|FBtr0301200 18759234|18759234|18759234|18759234|18759234|18759234 18759467|18759467|18759467|18759467|18759467|18759467 CTGTGATT 8mer-m1 dme-miR-308-3p 3R - 18759324 18759374 3'utr CG7720 FlyBase G39641.1 AAGTGTTTCATGTCTATAAAGATGCTGTGATTTTCTGTGCGCGACTGTTGT 69 18759352 0.867694423 8 68 678 0.981981982 2.037426498 0.081081081 0.376811594 0.612612613 69 2 0 109 3R:18759324-18759374 8 72.5 2870 FBgn0038652 105.2733333 4.686666667 7.096666667 0.688683427 15.46941679 10.21606388 2 2 2 0.15 dme-miR-33-5p 6mer3-8 CAATGC 3R 18909107 18909112 + 3R_18909107_18909112_+ 0.999995006 0.987275636 0.993635321 0.008993974 EndoA FBtr0083698|FBtr0334522|FBtr0083699 18908375|18908375|18908375 18910348|18910755|18910348 3R + 18909097 18909136 3'utr EndoA FlyBase G43825.1 CAACCTACGCCAATGCGCTCTCTATGCAAATGTCCCTTTA 6 18909112 0.976850932 4 5 36 1 0.77815125 0 0 0 6 0 0 6 3R:18909097-18909136 6 EndoA FBtr0083699|FBtr0334522|FBtr0083698 18908375|18908375|18908375 18910348|18910755|18910348 CAATGC 6mer3-8 dme-miR-33-5p 3R + 18909097 18909134 3'utr EndoA FlyBase G33116.1 CAACCTACGCCAATGCGCTCTCTATGCAAATGTCCCTT 6 18909110 0.972798488 3 5 33 1 1 0.2 0.5 0.7 6 0 0 10 3R:18909097-18909134 6 4 2871 FBgn0038659 593.6566667 19.89333333 30.41666667 0.006737901 0.201072386 0.131506849 -5 -3 -4 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 18926553 18926558 + 3R_18926553_18926558_+ 0.883827361 0.99989108 0.94185922 0.082069429 Xrp1 FBtr0083700|FBtr0083702|FBtr0083703|FBtr0113246|FBtr0334523|FBtr0083701|FBtr0334524 18926503|18926503|18926503|18926503|18926503|18926503|18926503 18926849|18926849|18926849|18926849|18926849|18926849|18926989 3R + 18926323 18926713 stop_codon Xrp1 FlyBase G43845.1 CGCGCCGGAAGACGAAGGTGCGCGAAGAGGAGGAGAAGCGCGCCGAGGACACGCTATTGGCCGAGAATCTGCGACTGCGTGCCCGGGCCGACGAAGTGGCCTCCCGGGAACGGAAGTTCAAGAAGTACCTGATGGAGCGCCAGCGGCAGAAGAGCACTTACGTTAAGCAGGAGCAGGACTGAGATTCTCGTAGCCATAGAATAGAAATTGCGGAGCATAAGCCTGTCATAGTACCTATCGTCGTCATCCAATTGTTTAGTTAGTTAAGTTGTCGTTGAAGAAGTCGAGAAGCAGAAATCAAATTTCCATTTCCATGTGGACATCAGTTAAGCCACTTATTAGGCATAGTGATGGCGCCCATAGTGCGCGAGGAGTGTTTAACTTTAATTTT 441 18926540 0.974094915 57 399 2448 0.900191939 1.893021592 0.230326296 0.163265306 0.291746641 441 47 5 469 3R:18926323-18926713 6 Xrp1 FBtr0113246|FBtr0334523|FBtr0083701|FBtr0334524|FBtr0083700|FBtr0083702|FBtr0083703 18926503|18926503|18926503|18926503|18926503|18926503|18926503 18926849|18926849|18926849|18926989|18926849|18926849|18926849 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 18926424 18926572 stop_codon Xrp1 FlyBase G33136.2 TCCCGGGAACGGAAGTTCAAGAAGTACCTGATGGAGCGCCAGCGGCAGAAGAGCACTTACGTTAAGCAGGAGCAGGACTGAGATTCTCGTAGCCATAGAATAGAAATTGCGGAGCATAAGCCTGTCATAGTACCTATCGTCGTCATCCA 214 18926540 0.982234872 23 188 1019 0.890965732 2.456366033 0.230529595 0.35046729 0.566978193 214 35 0 286 3R:18926424-18926572 6 127 2872 FBgn0261113 7206.666667 268.3933333 411.66 0.017622572 0.47318612 0.30850702 13 13 13 0.15 dme-miR-14-3p 6mer3-8 AAGACT 3R 19045871 19045876 - 3R_19045871_19045876_- 0.999991123 0.99660812 0.998299622 0.002392142 cdi FBtr0305321|FBtr0083716 19044880|19045692 19047703|19046616 3R - 19045842 19045913 3'utr cdi FlyBase G52542.1 TTTAAATAATTACATAGACTTACCGACTTGAGGTTTTAAGACTTAAAGCCCCCTTTCCCTCGAAAATTGTAC 59 19045878 0.704452325 10 55 400 0.940298507 1.799340549 0.089552239 0.118644068 0.223880597 59 4 0 63 3R:19045842-19045913 6 cdi FBtr0305321|FBtr0083716 19044880|19045692 19047703|19046616 AAGACT 6mer3-8 dme-miR-14-3p 3R - 19045821 19045912 3'utr cdi FlyBase G39657.2 TTAAATAATTACATAGACTTACCGACTTGAGGTTTTAAGACTTAAAGCCCCCTTTCCCTCGAAAATTGTACAGATGATCCCGGATCGATTTG 32 19045859 0.771551338 12 28 179 0.906976744 1.591064607 0.069767442 0.21875 0.418604651 32 4 0 39 3R:19045821-19045912 6 26 2873 FBgn0004876 813.04 17.12 26.29666667 0.031978746 1.518691589 0.988718469 2 -17 -7.5 0.15 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 19046594 19046599 - 3R_19046594_19046599_- 0.767573029 0.763263848 0.765418438 0.003047065 cdi FBtr0305321|FBtr0083716 19044880|19045692 19047703|19046616 3R - 19046407 19046627 stop_codon cdi FlyBase G52545.1 AAGGCGGCTAGCTGTGGTGGGGACCTTGTGATGAAAACCCCGACCTGATTCATATTTAATAACTTATTTCTTCGATTCTTTGAGATTTTTATCCCCATACACGATTCCTTTATACCTGGCAGTACCACTTGATAAAAATACAAAAAATAATCGCAAATAATTTTGCCCACAAAAGTTGGTTAGTTTACGATGCCTAAAGGTTTAATTTGTAAGTAAATAGT 51 19046601 0.980927444 23 48 360 0.938461538 1.183269844 0.2 0.235294118 0.4 51 1 3 61 3R:19046407-19046627 6 cdi FBtr0305321|FBtr0083716 19044880|19045692 19047703|19046616 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R - 19046502 19046626 stop_codon cdi FlyBase G39660.1 AGGCGGCTAGCTGTGGTGGGGACCTTGTGATGAAAACCCCGACCTGATTCATATTTAATAACTTATTTCTTCGATTCTTTGAGATTTTTATCCCCATACACGATTCCTTTATACCTGGCAGTACC 32 19046602 0.823727324 13 31 227 0.978723404 1.662757832 0.404255319 0.34375 0.553191489 32 1 0 46 3R:19046502-19046626 6 14.5 2874 FBgn0004876 813.04 17.12 26.29666667 0.017834301 0.846962617 0.551400684 2 3 2.5 0.15 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 19139080 19139087 - 3R_19139080_19139087_- 0.625363792 0.625364009 0.6253639 1.41E-07 Ppcs FBtr0083752|FBtr0330044 19139052|19139052 19141595|19141415 3R - 19139068 19139108 3'utr Ppcs FlyBase G52566.1 TGTATTAAACTGGAAATGAAATAGCTTTAAATGTATAGACA 6 19139088 0.869527985 3 6 46 1 0.77815125 0.166666667 0 0 6 0 0 6 3R:19139068-19139108 8 Ppcs FBtr0083752|FBtr0330044 19139052|19139052 19141595|19141415 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R - 19139069 19139109 3'utr Ppcs FlyBase G39679.1 GTGTATTAAACTGGAAATGAAATAGCTTTAAATGTATAGAC 5 19139087 0.980026608 4 4 29 0.777777778 0.84509804 0.333333333 0.8 0.888888889 5 2 0 7 3R:19139069-19139109 8 5 2875 FBgn0261285 111.1666667 3.44 5.32 0.044977511 1.453488372 0.939849624 1 0 0.5 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 19139918 19139924 - 3R_19139918_19139924_- 0.650904584 0.64986885 0.650386717 0.00073235 Ppcs FBtr0083752|FBtr0330044 19139052|19139052 19141595|19141415 3R - 19139896 19139955 3'utr Ppcs FlyBase G52569.1 ATGTATAACTAGCCAAGTGTGCGAACAAGATGGCAGCTGCGAATGGATGGTATTTGCTTT 256 19139925 0.97985026 6 252 649 0.987341772 2.494154594 0.607594937 0.19140625 0.344936709 256 4 0 312 3R:19139896-19139955 7 Ppcs FBtr0083752|FBtr0330044 19139052|19139052 19141595|19141415 GGCAGCT 7mer-m8 dme-miR-980-3p 3R - 19139888 19139950 3'utr Ppcs FlyBase G39680.1 TAACTAGCCAAGTGTGCGAACAAGATGGCAGCTGCGAATGGATGGTATTTGCTTTTACTGGCA 201 19139925 0.983077454 7 199 451 0.993846154 2.509202522 0.593846154 0.437810945 0.652307692 201 2 0 323 3R:19139888-19139950 7 226 2876 FBgn0261285 111.1666667 3.44 5.32 2.032983508 65.69767442 42.48120301 1 1 1 0.15 dme-miR-184-3p 7mer-m8 TCCGTCC 3R 19140425 19140431 - 3R_19140425_19140431_- 0.653144592 0.653053151 0.653098871 6.46E-05 Ppcs FBtr0083752|FBtr0330044 19139052|19139052 19141595|19141415 3R - 19140406 19140492 3'utr Ppcs FlyBase G52570.1 GAACCTCTGGCGAAGGGTTGGCGGTGGATTTGTATCCTCCTTTCATGGAGTTGTAACCACTTCCGTCCCGCCCGCATTTGTGGTTTA 276 19140432 0.817876031 7 274 1467 0.993650794 2.194514342 0.225396825 0.123188406 0.231746032 276 1 1 313 3R:19140406-19140492 7 Ppcs FBtr0083752|FBtr0330044 19139052|19139052 19141595|19141415 TCCGTCC 7mer-m8 dme-miR-184-3p 3R - 19140406 19140458 3'utr Ppcs FlyBase G39681.1 TCCTCCTTTCATGGAGTTGTAACCACTTCCGTCCCGCCCGCATTTGTGGTTTA 123 19140432 0.809536684 4 121 637 0.988304094 2.227886705 0.18128655 0.276422764 0.479532164 123 2 0 169 3R:19140406-19140458 7 196.5 2877 FBgn0261285 111.1666667 3.44 5.32 1.767616192 57.12209302 36.93609023 1 1 1 0.15 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3R 19140901 19140907 - 3R_19140901_19140907_- 0.511224914 0.605171353 0.558198134 0.066430207 Ppcs FBtr0083752|FBtr0330044 19139052|19139052 19141595|19141415 3R - 19140880 19140961 3'utr Ppcs FlyBase G52572.1 TAGCGACAGAGTGCATGCAATCGCAATTTGCCGGACGTTGTGTCCCTGGACAACTGGTGCTGTGTGTCAGTGGCAGGCGACG 10 19140905 0.977463626 8 10 65 1 1.041392685 0.181818182 0.1 0.181818182 10 0 0 11 3R:19140880-19140961 7 Ppcs FBtr0083752|FBtr0330044 19139052|19139052 19141595|19141415 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3R - 19140896 19140934 3'utr Ppcs FlyBase G39682.1 TTGCCGGACGTTGTGTCCCTGGACAACTGGTGCTGTGTG 5 19140904 0.918301843 4 5 35 1 0.84509804 0.428571429 0.2 0.428571429 5 0 0 7 3R:19140896-19140934 7 5 2878 FBgn0261285 111.1666667 3.44 5.32 0.044977511 1.453488372 0.939849624 -2 -3 -2.5 0.15 dme-miR-276a-3p 6mer3-8 AGTTCC 3R 19141331 19141336 - 3R_19141331_19141336_- 0.999739098 0.999465216 0.999602157 0.000193677 Ppcs FBtr0347007|FBtr0083752|FBtr0330044 19140994|19139052|19139052 19141595|19141595|19141415 3R - 19141181 19141363 3'utr Ppcs FlyBase G52573.1 TCGATTCATCCTTGCCCTTGGACTTTGAGTTCCCGCCACAATTTAGCTATCTATTTATGGTCGCGCCTCATAATTGAGGTGGCACCGCTCCATTAGTCCATTATCCTGTTGTTATTATTATTTTGGTATTAGTTAATGTATTGGCCCTATTGTTGTCCTGAGAAATGATGTCACTTGTATGTA 90 19141334 0.823114811 24 87 740 0.953703704 1.711807229 0.175925926 0.144444444 0.287037037 90 4 1 103 3R:19141181-19141363 6 Ppcs FBtr0347007|FBtr0083752|FBtr0330044 19140994|19139052|19139052 19141595|19141595|19141415 AGTTCC 6mer3-8 dme-miR-276a-3p 3R - 19141253 19141359 3'utr Ppcs FlyBase G39684.1 TTCATCCTTGCCCTTGGACTTTGAGTTCCCGCCACAATTTAGCTATCTATTTATGGTCGCGCCTCATAATTGAGGTGGCACCGCTCCATTAGTCCATTATCCTGTTG 46 19141334 0.799076176 15 44 355 0.971428571 1.531478917 0.085714286 0.391304348 0.6 46 1 1 68 3R:19141253-19141359 6 45.5 2879 FBgn0261285 111.1666667 3.44 5.32 0.409295352 13.22674419 8.552631579 -2 -2 -2 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 19148727 19148734 - 3R_19148727_19148734_- 0.645338549 0.635919567 0.640629058 0.006660168 CG5835 FBtr0083751|FBtr0083751|FBtr0083751 19148630|19148630|19148630 19149037|19149037|19149037 3R - 19148654 19148757 3'utr CG5835 FlyBase G52579.1 AAGACCAATTAGTTAGTAAGTTTCTGTGATATTGTTCTAGAGATTCTTTTGTACGTCCTTGCACTAACAATACGCATAGAACCCACGTTGCTAATCGATAATAA 65 19148735 0.993584955 20 60 743 0.950617284 1.58546073 0.061728395 0.2 0.358024691 65 3 1 77 3R:19148654-19148757 8 CG5835 FBtr0083751|FBtr0083751|FBtr0083751 19148630|19148630|19148630 19149037|19149037|19149037 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 19148691 19148755 3'utr CG5835 FlyBase G39688.1 GACCAATTAGTTAGTAAGTTTCTGTGATATTGTTCTAGAGATTCTTTTGTACGTCCTTGCACTAA 47 19148735 0.660163736 11 42 567 0.893333333 1.348953548 0.093333333 0.468085106 0.666666667 47 6 2 67 3R:19148691-19148755 8 50.5 2880 FBgn0038682 101.3333333 9.206666667 14.04333333 0.498355263 5.485155684 3.596012343 1 1 1 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 3R 19154505 19154510 - 3R_19154505_19154510_- 0.999997952 0.999722342 0.999860147 0.000194949 CG11779 FBtr0083750|FBtr0335020|FBtr0083749 19154095|19154095|19154403 19155132|19155132|19155132 3R - 19154487 19154545 3'utr CG11779 FlyBase G52582.1 ATGGAATTCGCTCAGGGCGGCTTGGGCATCGTAAATTGACTGTACACACAGAATCCAAA 7 19154509 0.980416204 4 6 42 0.888888889 0.602059991 0.444444444 0.285714286 0.444444444 7 0 1 8 3R:19154487-19154545 6 CG11779 FBtr0083749|FBtr0335020|FBtr0083750 19154403|19154095|19154095 19155132|19155132|19155132 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 19154494 19154522 3'utr CG11779 FlyBase G39690.1 GGGCATCGTAAATTGACTGTACACACAGA 6 19154503 0.903547297 3 6 29 1 1.079181246 0.666666667 0.5 0.75 6 0 0 12 3R:19154494-19154522 6 5.5 2881 FBgn0038683 227.2933333 11.68666667 17.73333333 0.024197806 0.470621791 0.310150376 -1 -7 -4 0.15 dme-miR-79-3p 6mer3-8 TAGCTT 3R 19169868 19169873 + 3R_19169868_19169873_+ 0.975809212 0.965189141 0.970499176 0.007509545 sqz FBtr0083733 19169821 19170576 3R + 19169811 19169917 stop_codon sqz FlyBase G43908.1 AAGGCGCAATAGTACAGGCCGTCAGGTCGGGGCCAAAAGAGGCAGCAACGATGACATTAGCTTAGGATCAACGTTTAAGTTGGTATGGATACAAGAGCGTGGTATTT 75 19169867 0.929515235 12 67 334 0.903225806 1.447158031 0.096774194 0.226666667 0.376344086 75 7 2 84 3R:19169811-19169917 6 sqz FBtr0083733 19169821 19170576 TAGCTT 6mer3-8 dme-miR-79-3p 3R + 19169812 19169886 stop_codon sqz FlyBase G33183.1 AGGCGCAATAGTACAGGCCGTCAGGTCGGGGCCAAAAGAGGCAGCAACGATGACATTAGCTTAGGATCAACGTTT 42 19169867 0.962060558 6 33 162 0.786666667 1.469822016 0.026666667 0.5 0.72 42 15 1 59 3R:19169812-19169886 6 40 2882 FBgn0010768 210.2766667 7.726666667 11.73666667 0.190225576 5.176876618 3.408122692 1 1 1 0.15 dme-miR-34-5p 7mer-m8 CACTGCC 3R 19170090 19170096 + 3R_19170090_19170096_+ 0.705937232 0.705783386 0.705860309 0.000108753 sqz FBtr0083733 19169821 19170576 3R + 19170077 19170226 3'utr sqz FlyBase G43909.1 AAATCAACTCCATCACTGCCCAAAACCAATAAGAAAATCAACTGCAATCCTACAGTTTCTGTGCTATTTTCAACTGCCATATGAAAGTAATATGTAATATCTAGATCAACTCAGGATTTTAAATACGATAATTATGCACACTTTTAGATA 321 19170089 0.807926662 22 304 1125 0.95 1.579783597 0.04 0.193146417 0.3525 321 11 9 380 3R:19170077-19170226 7 sqz FBtr0083733 19169821 19170576 CACTGCC 7mer-m8 dme-miR-34-5p 3R + 19170077 19170110 3'utr sqz FlyBase G33184.1 AAATCAACTCCATCACTGCCCAAAACCAATAAGA 155 19170089 0.796445737 3 140 378 0.916666667 1.597695186 0.00462963 0.324675325 0.518518519 154 14 4 198 3R:19170077-19170110 7 206.5 2883 FBgn0010768 210.2766667 7.726666667 11.73666667 0.982039535 26.72562554 17.5944334 1 1 1 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3R 19178150 19178156 - 3R_19178150_19178156_- 0.443130965 0.443128316 0.443129641 1.91E-06 CG5555 FBtr0083746|FBtr0332165 19178083|19178083 19178257|19178257 3R - 19178093 19178177 3'utr CG5555 FlyBase G52594.1 AAGGTTTATAACAGCTCTATATGTGATTTCCTTTGTATAACGAAAACCTAAGGATTAAATATAACTACTACTACGTAGAAAACCA 142 19178150 0.98510694 12 137 1194 0.962765957 1.78055732 0.053191489 0.253521127 0.436170213 142 5 2 181 3R:19178093-19178177 7 CG5555 FBtr0083746|FBtr0332165 19178083|19178083 19178257|19178257 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 19178106 19178177 3'utr CG5555 FlyBase G39700.1 AAGGTTTATAACAGCTCTATATGTGATTTCCTTTGTATAACGAAAACCTAAGGATTAAATATAACTACTACT 114 19178150 0.860162087 13 107 926 0.936781609 1.73506635 0.040229885 0.385964912 0.597701149 114 9 2 163 3R:19178106-19178177 7 94.5 2884 FBgn0038686 438.3333333 26.99 41.29333333 0.215589354 3.501296777 2.288505005 -6 -6 -6 0.15 dme-miR-317-3p 7mer-A1 GTGTTCA 3R 19405089 19405095 + 3R_19405089_19405095_+ 0.823018767 0.812635024 0.817826895 0.007342455 CG5316 FBtr0083759 19404158 19406294 3R + 19405063 19405101 3'utr CG5316 FlyBase G43918.1 CTTTCAAATTGCGTATATGATGCTCAGTGTTCAGGGATC 11 19405080 0.814293571 3 9 80 0.846153846 1.041392685 0.384615385 0.181818182 0.307692308 11 2 0 11 3R:19405063-19405101 7 CG5316 FBtr0083759 19404158 19406294 GTGTTCA 7mer-A1 dme-miR-317-3p 3R + 19405069 19405103 3'utr CG5316 FlyBase G33193.1 AATTGCGTATATGATGCTCAGTGTTCAGGGATCCA 7 19405080 0.815865428 3 7 53 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 3R:19405069-19405103 7 9 2885 FBgn0038704 1029.49 52.37666667 80.40666667 0.008742193 0.171832241 0.111931017 9 9 9 0.15 dme-miR-2a-2-5p 7mer-m1 GATGAGG 3R 19405301 19405307 + 3R_19405301_19405307_+ 0.81175287 0.82279944 0.817276155 0.007811055 CG5316 FBtr0083759 19404158 19406294 3R + 19405273 19405317 3'utr CG5316 FlyBase G43919.1 AATCCAAATGATATCTGAGACCAAACTGGATGAGGCAGAGGCAAA 11 19405303 0.921496364 3 11 21 1 1.041392685 0.363636364 0 0 11 0 0 11 3R:19405273-19405317 7 CG5316 FBtr0083759 19404158 19406294 GATGAGG 7mer-m1 dme-miR-2a-2-5p 3R + 19405272 19405318 3'utr CG5316 FlyBase G33194.1 TAATCCAAATGATATCTGAGACCAAACTGGATGAGGCAGAGGCAAAG 11 19405303 0.918799379 3 10 35 0.888888889 1.204119983 0.611111111 0.363636364 0.611111111 11 2 0 16 3R:19405272-19405318 7 8.5 2886 FBgn0038704 1029.49 52.37666667 80.40666667 0.008256515 0.162286005 0.105712627 -2 -2 -2 0.15 dme-miR-14-3p 6mer2-7 AGACTG 3R 19606384 19606389 + 3R_19606384_19606389_+ 0.982366992 0.999234236 0.990800614 0.011926911 CG7342 FBtr0304745|FBtr0083777 19606277|19606277 19606475|19606475 3R + 19606362 19606408 3'utr CG7342 FlyBase G43952.1 ACAAGCAGCGGTATCAAAAATTAGACTGTATTTGTAGAATAAGTTTT 19 19606382 0.878180842 3 17 170 0.9 1.255272505 0.35 0.052631579 0.1 19 2 0 18 3R:19606362-19606408 6 CG7342 FBtr0304745|FBtr0083777 19606277|19606277 19606475|19606475 AGACTG 6mer2-7 dme-miR-14-3p 3R + 19606351 19606406 3'utr CG7342 FlyBase G33211.1 TATTTTGTAGTACAAGCAGCGGTATCAAAAATTAGACTGTATTTGTAGAATAAGTT 10 19606382 0.988301512 3 10 90 1 1.079181246 0.083333333 0.1 0.25 10 0 0 12 3R:19606351-19606406 6 13.5 2887 FBgn0038716 2 0.116666667 0.186666667 6.75 115.7142857 72.32142857 2 2 2 0.15 dme-miR-184-5p 6mer3-8 TGATAA 3R 19616141 19616146 - 3R_19616141_19616146_- 0.919843911 0.710733516 0.815288714 0.147863382 CG6231 FBtr0083807|FBtr0083809|FBtr0083810|FBtr0334923|FBtr0334924|FBtr0083808 19616022|19616022|19616022|19616022|19616022|19616022 19616637|19616637|19616637|19616637|19616637|19616637 3R - 19616122 19616191 3'utr CG6231 FlyBase G52640.1 ATTTTGGAGTTTGATCTTTAAGCAAATGAGAGCCATTAAGCAAACTGATAATAATTATTTAAAGTTAGAG 16 19616156 0.751770983 7 15 97 0.958333333 1.06069784 0.166666667 0.375 0.583333333 16 0 1 23 3R:19616122-19616191 6 CG6231 FBtr0334924|FBtr0083808|FBtr0083810|FBtr0334923|FBtr0083807|FBtr0083809 19616022|19616022|19616022|19616022|19616022|19616022 19616637|19616637|19616637|19616637|19616637|19616637 TGATAA 6mer3-8 dme-miR-184-5p 3R - 19616133 19616188 3'utr CG6231 FlyBase G39728.1 TTGGAGTTTGATCTTTAAGCAAATGAGAGCCATTAAGCAAACTGATAATAATTATT 14 19616156 0.69552903 7 12 80 0.875 0.84509804 0.0625 0.142857143 0.25 14 1 1 14 3R:19616133-19616188 6 10.5 2888 FBgn0038720 426.3333333 16.67 25.63 0.024628616 0.629874025 0.409676161 10 10 10 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 19633731 19633736 - 3R_19633731_19633736_- 0.999999994 0.999987885 0.99999394 8.56E-06 subdued FBtr0334922|FBtr0083806|FBtr0334921|FBtr0083805|FBtr0302492 19633416|19633416|19633416|19633416|19633416 19633928|19633928|19633928|19633928|19633928 3R - 19633668 19633756 3'utr subdued FlyBase G52653.1 ATTTAGGTAATCCAATTTTATGATCTGTTAATTGAAAATGATTTATTAAGTGGCTCAAACTTATATTTATGCAGCCCAAGTGAGTGCCA 21 19633735 0.990438205 6 21 213 1 1.361727836 0.043478261 0.095238095 0.173913043 21 0 0 23 3R:19633668-19633756 6 subdued FBtr0334922|FBtr0302492|FBtr0083805|FBtr0334921|FBtr0083806 19633416|19633416|19633416|19633416|19633416 19633928|19633928|19633928|19633928|19633928 TGATCT 6mer3-8 dme-bantam-3p 3R - 19633693 19633753 3'utr subdued FlyBase G39737.1 TAGGTAATCCAATTTTATGATCTGTTAATTGAAAATGATTTATTAAGTGGCTCAAACTTAT 15 19633736 0.988004308 7 13 134 0.96 1.380211242 0 0.466666667 0.68 15 1 0 24 3R:19633693-19633753 6 14.5 2889 FBgn0038721 940.6666667 28.25333333 43.49 0.0154146 0.51321378 0.333409979 -1 0 -0.5 0.15 dme-miR-276a-3p 6mer2-7 GTTCCT 3R 19633885 19633890 - 3R_19633885_19633890_- 0.998956509 0.971436628 0.985196568 0.019459508 subdued FBtr0334922|FBtr0083806|FBtr0334921|FBtr0083805|FBtr0302492 19633416|19633416|19633416|19633416|19633416 19633928|19633928|19633928|19633928|19633928 3R - 19633856 19633912 3'utr subdued FlyBase G52654.1 AGTGATTATTTGTGTTACGAATGTTCCTTTCAGTCACTTAATTAGGCCTTAGCTATG 38 19633891 0.753159584 6 36 336 0.979591837 1.681241237 0.469387755 0.210526316 0.387755102 38 1 0 48 3R:19633856-19633912 6 subdued FBtr0334922|FBtr0302492|FBtr0083805|FBtr0334921|FBtr0083806 19633416|19633416|19633416|19633416|19633416 19633928|19633928|19633928|19633928|19633928 GTTCCT 6mer2-7 dme-miR-276a-3p 3R - 19633842 19633922 3'utr subdued FlyBase G39738.1 AATCATTCAAAGTGATTATTTGTGTTACGAATGTTCCTTTCAGTCACTTAATTAGGCCTTAGCTATGACACTTTTATTATT 37 19633884 0.670737474 10 36 306 0.967213115 1.770852012 0.344262295 0.459459459 0.672131148 37 2 0 59 3R:19633842-19633922 6 30.5 2890 FBgn0038721 940.6666667 28.25333333 43.49 0.032423813 1.079518641 0.701310646 1 -6 -2.5 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 19643286 19643292 - 3R_19643286_19643292_- 0.661615616 0.661608264 0.66161194 5.16E-06 Vha13 FBtr0083804|FBtr0346100 19643256|19643016 19643507|19643507 3R - 19643265 19643322 3'utr Vha13 FlyBase G52668.1 CACTCGCGCGGGATTGTATTATCATTGTTTTGTGTTCTGCCCAATACACGTTGTTGTT 11 19643294 0.987991914 10 11 112 1 1.113943352 0.076923077 0.181818182 0.307692308 11 0 0 13 3R:19643265-19643322 7 Vha13 FBtr0346100|FBtr0083804 19643016|19643256 19643507|19643507 TGTGTTC 7mer-m8 dme-miR-317-3p 3R - 19643273 19643321 3'utr Vha13 FlyBase G39753.1 ACTCGCGCGGGATTGTATTATCATTGTTTTGTGTTCTGCCCAATACACG 6 19643309 0.985991727 3 6 55 1 0.954242509 0.333333333 0.333333333 0.555555556 6 0 0 9 3R:19643273-19643321 7 5.5 2891 FBgn0026753 1193.436667 217.27 330.9333333 0.004608539 0.025314125 0.016619662 2 17 9.5 0.15 dme-miR-283-5p 8mer-A1 TGATATTA 3R 19698583 19698590 + 3R_19698583_19698590_+ 0.592180689 0.592192006 0.592186347 7.99E-06 Naam FBtr0335415 19698182 19698742 3R + 19698548 19698603 3'utr Naam FlyBase G43962.1 CTTAATGTTGTGCGCTGCACCTGTTTGAATCAAATTGATATTATATACAACCAACA 32 19698582 0.745180718 8 21 294 0.641025641 1.397940009 0.256410256 0.1875 0.333333333 32 14 0 25 3R:19698548-19698603 8 Naam FBtr0335415 19698182 19698742 TGATATTA 8mer-A1 dme-miR-283-5p 3R + 19698542 19698593 3'utr Naam FlyBase G33215.1 AGGGTTCTTAATGTTGTGCGCTGCACCTGTTTGAATCAAATTGATATTATAT 19 19698573 0.96710979 6 12 191 0.535714286 0.875061263 0.035714286 0.263157895 0.5 19 12 1 15 3R:19698542-19698593 8 24 2892 FBgn0051216 617.35 42.02 64.22 0.03887584 0.571156592 0.373715353 1 10 5.5 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 19698675 19698682 + 3R_19698675_19698682_+ 0.49990654 0.498250213 0.499078376 0.001171181 Naam FBtr0335415 19698182 19698742 3R + 19698652 19698701 3'utr Naam FlyBase G43963.1 TGCTTCAGTGAGAAATATTGTATGTACTTAAAAATGTTCAAATAAAAGTA 11 19698674 0.982829168 3 11 87 1 1.146128036 0.357142857 0.272727273 0.428571429 11 0 0 14 3R:19698652-19698701 8 Naam FBtr0335415 19698182 19698742 GTACTTAA 8mer-A1 dme-miR-252-5p 3R + 19698643 19698691 3'utr Naam FlyBase G33216.1 TAGAACAACTGCTTCAGTGAGAAATATTGTATGTACTTAAAAATGTTCA 6 19698674 0.984116513 2 6 44 1 0.903089987 0.25 0.166666667 0.375 6 0 0 8 3R:19698643-19698691 8 7.5 2893 FBgn0051216 617.35 42.02 64.22 0.0121487 0.178486435 0.116786048 1 1 1 0.15 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 19794796 19794801 - 3R_19794796_19794801_- 1 0.61409137 0.807045685 0.272878588 bnl FBtr0300123 19794587 19795490 3R - 19794771 19794831 3'utr bnl FlyBase G52678.1 AACGAGATAAATGCGTGAAATTATAGTTGTAGCTGTATGATGGATTTATTTATTTATTTAA 22 19794820 0.816672733 9 21 209 0.961538462 1.096910013 0.423076923 0.181818182 0.307692308 22 0 1 25 3R:19794771-19794831 6 bnl FBtr0300123 19794587 19795490 AGCTGT 6mer3-8 dme-miR-1008-3p 3R - 19794768 19794820 3'utr bnl FlyBase G39761.1 TGCGTGAAATTATAGTTGTAGCTGTATGATGGATTTATTTATTTATTTAAAAA 9 19794791 0.989056978 5 8 91 0.846153846 1.041392685 0.307692308 0.444444444 0.615384615 9 2 0 11 3R:19794768-19794820 6 13 2894 FBgn0014135 131.55 3.81 5.713333333 0.098821741 3.412073491 2.27537923 19 -10 4.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 19854208 19854215 - 3R_19854208_19854215_- 0.636857846 0.634637817 0.635747831 0.001569777 Ire1 FBtr0113248|FBtr0113248|FBtr0113248 19853906|19853906|19853906 19854439|19854439|19854439 3R - 19854037 19854369 3'utr Ire1 FlyBase G52691.1 TTAATCGTGCAATTTGTGTATATGCAACTATTCCAAAATGATTCCCAATTCAGTTCTTAGCAAAAATATTCAACGGTAAGTAAACAAATGAAACTATTTTGTATACCAAGTAAGAATAATGTAGTGTGTCTTCTGTCGAATGCACGGAATTTAACTGTGATAATTTTTGATTTTGTTCAATGCCCAAGTGCAAGTTGATCTAGACAAATAGTTCGAGTTTTATATATAGTACCTAGACTTATTGTATATTTATGCATTAGTTAAGACACACCTACCTATCCCAACACTCCTCCCATTCGTGGAGATCCTTGACAAGCGAAGTTTTTAGTTTTT 873 19854219 0.834446738 64 805 6870 0.922800718 1.898049762 0.31508079 0.213058419 0.383303411 873 74 12 1028 3R:19854037-19854369 8 Ire1 FBtr0113248|FBtr0113248|FBtr0113248 19853906|19853906|19853906 19854439|19854439|19854439 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 19854032 19854368 3'utr Ire1 FlyBase G39769.1 TAATCGTGCAATTTGTGTATATGCAACTATTCCAAAATGATTCCCAATTCAGTTCTTAGCAAAAATATTCAACGGTAAGTAAACAAATGAAACTATTTTGTATACCAAGTAAGAATAATGTAGTGTGTCTTCTGTCGAATGCACGGAATTTAACTGTGATAATTTTTGATTTTGTTCAATGCCCAAGTGCAAGTTGATCTAGACAAATAGTTCGAGTTTTATATATAGTACCTAGACTTATTGTATATTTATGCATTAGTTAAGACACACCTACCTATCCCAACACTCCTCCCATTCGTGGAGATCCTTGACAAGCGAAGTTTTTAGTTTTTATATC 625 19854219 0.942288322 59 570 4917 0.919732441 1.962211439 0.275362319 0.3248 0.529542921 625 64 8 825 3R:19854032-19854368 8 416.5 2895 FBgn0261984 824.9233333 24.51333333 37.36 0.504895404 16.99075333 11.14828694 4 4 4 0.15 dme-miR-79-3p 7mer-A1 AGCTTTA 3R 19854403 19854409 - 3R_19854403_19854409_- 0.68985944 0.822752042 0.756305741 0.093969259 Ire1 FBtr0113248 19853906 19854439 3R - 19854391 19854463 stop_codon Ire1 FlyBase G52692.1 CTGCCACCTTCAACGCAGGATTAGGGCATAGACCCAACCAGATCAGATTAGACAAGCTTTAGTTGTAATCATT 51 19854416 0.797348263 10 48 290 0.93442623 1.45484486 0.114754098 0.156862745 0.295081967 51 3 1 57 3R:19854391-19854463 7 Ire1 FBtr0113248 19853906 19854439 AGCTTTA 7mer-A1 dme-miR-79-3p 3R - 19854380 19854456 stop_codon Ire1 FlyBase G39770.1 CTTCAACGCAGGATTAGGGCATAGACCCAACCAGATCAGATTAGACAAGCTTTAGTTGTAATCATTTATTAAGATAA 27 19854416 0.867403683 7 27 142 1 1.653212514 0.066666667 0.407407407 0.644444444 27 0 0 45 3R:19854380-19854456 7 28 2896 FBgn0261984 824.9233333 24.51333333 37.36 0.033942548 1.142235518 0.749464668 7 7 7 0.15 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 19899195 19899202 - 3R_19899195_19899202_- 0.385338105 0.383863614 0.384600859 0.001042629 CG4538 FBtr0083855|FBtr0344261|FBtr0344262 19898827|19897370|19898542 19899595|19899291|19899595 3R - 19899155 19899230 3'utr CG4538 FlyBase G52721.1 AAAGAATGTCCTCAATCCCCAAATGCATCTGTGATTCATAAACGACGAGCAGCGCAGTCTTTTGAGCCCGAAGCAA 37 19899203 0.982723831 6 34 252 0.926829268 1.278753601 0.097560976 0.108108108 0.195121951 37 2 1 38 3R:19899155-19899230 8 CG4538 FBtr0344262|FBtr0083855|FBtr0344261 19898542|19898827|19897370 19899595|19899595|19899291 CTGTGATT 8mer-m1 dme-miR-308-3p 3R - 19899189 19899225 3'utr CG4538 FlyBase G39789.1 ATGTCCTCAATCCCCAAATGCATCTGTGATTCATAAA 22 19899203 0.802509403 2 19 147 0.878787879 1.161368002 0 0.363636364 0.575757576 22 3 1 29 3R:19899189-19899225 8 27 2897 FBgn0038745 776.53 28.94666667 44.57666667 0.034770067 0.932749885 0.605698048 1 1 1 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 3R 19913252 19913258 + 3R_19913252_19913258_+ 0.401980878 0.41660178 0.409291329 0.010338538 RhoGAP92B FBtr0344352|FBtr0344351|FBtr0344353|FBtr0344354|FBtr0083821 19913083|19913083|19913083|19913083|19913083 19913730|19913730|19913730|19914272|19913730 3R + 19913084 19913315 3'utr RhoGAP92B FlyBase G44024.1 GAGGGGAATGAGTAGAGAGGACGCGCAATGGAAACGTGGTCAGAGTCATTAGGTGTTACTGTTTACTCGTTAAGACTTGAACGCACAGTAATATATATATATATTTCGAAATGATCCTTGCGGTAAGGAGACTTTGTGCATTATAGAGAGAAAAGCCTCTGCGTATTATGCATTTGTATTTTTGCCTTGTTCATAAGCAATCTAATTTGTACGTGTTTAGCCATATATAACA 424 19913243 0.810809433 46 405 2641 0.958333333 2.206825876 0.35515873 0.161137441 0.297619048 422 19 2 483 3R:19913084-19913315 7 RhoGAP92B FBtr0344352|FBtr0083821|FBtr0344354|FBtr0344353|FBtr0344351 19913083|19913083|19913083|19913083|19913083 19913730|19913730|19914272|19913730|19913730 TGCATTT 7mer-m8 dme-miR-277-3p 3R + 19913067 19913395 stop_codon RhoGAP92B FlyBase G33264.1 TGGAAGTCCTCGGACTAGAGGGGAATGAGTAGAGAGGACGCGCAATGGAAACGTGGTCAGAGTCATTAGGTGTTACTGTTTACTCGTTAAGACTTGAACGCACAGTAATATATATATATATTTCGAAATGATCCTTGCGGTAAGGAGACTTTGTGCATTATAGAGAGAAAAGCCTCTGCGTATTATGCATTTGTATTTTTGCCTTGTTCATAAGCAATCTAATTTGTACGTGTTTAGCCATATATAACAATATCACGCGATATCCATAACGTATATGTATGCATATATAGTCTTTAGTAGGCCACCATAAATCAATTGTCGAAATTCGA 314 19913243 0.976419113 49 295 1904 0.943107221 1.78937923 0.369803063 0.331210191 0.5404814 314 20 6 431 3R:19913067-19913395 7 31 2898 FBgn0038747 1846.786667 74.18 113.18 0.016785913 0.4179024 0.273899982 9 9 9 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3R 19913530 19913536 + 3R_19913530_19913536_+ 0.521221433 0.521223855 0.521222644 1.77E-06 RhoGAP92B FBtr0344352|FBtr0344351|FBtr0344353|FBtr0344354|FBtr0083821 19913083|19913083|19913083|19913083|19913083 19913730|19913730|19913730|19914272|19913730 3R + 19913341 19913548 3'utr RhoGAP92B FlyBase G44025.1 ATGTATGCATATATAGTCTTTAGTAGGCCACCATAAATCAATTGTCGAAATTCGATTTGTTAGCCCAAGCCAGCTCTCAATTGTTAATCCTTGTTTGAAAGGTTGTGATACTTCAGAAAGGTTTTGTGTTTCCTTAATTTTTTGCATTGCTCTTGAGTACGTTTTGTTAACTTCTCCAACGAAAGACATTGTGATTTCCTTTTATTAA 185 19913536 0.70833306 33 172 1511 0.934782609 1.48734042 0.156521739 0.183783784 0.343478261 185 9 6 215 3R:19913341-19913548 7 RhoGAP92B FBtr0344352|FBtr0083821|FBtr0344354|FBtr0344353|FBtr0344351 19913083|19913083|19913083|19913083|19913083 19913730|19913730|19914272|19913730|19913730 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 19913476 19913552 3'utr RhoGAP92B FlyBase G33265.2 AATTTTTTGCATTGCTCTTGAGTACGTTTTGTTAACTTCTCCAACGAAAGACATTGTGATTTCCTTTTATTAAAAGT 62 19913530 0.793786307 10 58 489 0.98 1.991226076 0.03 0.370967742 0.61 62 2 0 98 3R:19913476-19913552 7 65.5 2899 FBgn0038747 1846.786667 74.18 113.18 0.035467009 0.882987328 0.578724156 -6 0 -3 0.15 dme-miR-970-3p 8mer-A1 TCTTATGA 3R 19913878 19913885 + 3R_19913878_19913885_+ 0.630753252 0.630526442 0.630639847 0.000160443 RhoGAP92B FBtr0344354 19913083 19914272 3R + 19913850 19913890 3'utr RhoGAP92B FlyBase G44028.1 GCGCGTAGTGTATGTTAGAATGTGGATCTCTTATGAAATTG 11 19913880 0.864861084 3 11 93 1 1.079181246 0.333333333 0.090909091 0.166666667 11 0 0 12 3R:19913850-19913890 8 RhoGAP92B FBtr0344354 19913083 19914272 TCTTATGA 8mer-A1 dme-miR-970-3p 3R + 19913856 19913884 3'utr RhoGAP92B FlyBase G33268.1 AGTGTATGTTAGAATGTGGATCTCTTATG 6 19913880 0.70697278 3 6 55 1 1.041392685 0.454545455 0.666666667 0.818181818 6 0 0 11 3R:19913856-19913884 7 8.5 2900 FBgn0038747 1846.786667 74.18 113.18 0.004602589 0.114586142 0.075101608 -2 -2 -2 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3R 20018636 20018641 - 3R_20018636_20018641_- 0.976971953 0.872373257 0.924672605 0.07396245 CG4433 FBtr0344139|FBtr0083843|FBtr0307345 20018267|20018580|20018580 20018985|20018985|20018985 3R - 20018598 20018697 3'utr CG4433 FlyBase G52744.1 CTTTAATTCTTATTAGTTAGCTCTAATTATTATTTATACTCAGTCCAAGCAATGTTCCAAAGTGTGCGATGTAGTCAAGTGCTTTAAAATTAAATTAAAC 55 20018645 0.812052902 11 54 354 1 1.832508913 0.029411765 0.236363636 0.382352941 55 0 0 68 3R:20018598-20018697 6 CG4433 FBtr0307345|FBtr0344139|FBtr0083843 20018580|20018267|20018580 20018985|20018985|20018985 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 20018607 20018663 3'utr CG4433 FlyBase G39807.1 TATACTCAGTCCAAGCAATGTTCCAAAGTGTGCGATGTAGTCAAGTGCTTTAAAATT 29 20018645 0.839256805 8 27 168 0.956521739 1.643452676 0.086956522 0.413793103 0.630434783 29 2 0 44 3R:20018607-20018663 6 33 2901 FBgn0038763 673 36.29333333 55.97666667 0.049034175 0.909257899 0.589531352 4 4 4 0.15 dme-miR-932-5p 6mer2-7 GAATTG 3R 20018957 20018962 - 3R_20018957_20018962_- 0.999997046 0.994710906 0.997353976 0.003737837 CG4433 FBtr0344139|FBtr0083843|FBtr0307345 20018267|20018580|20018580 20018985|20018985|20018985 3R - 20018895 20018981 3'utr CG4433 FlyBase G52747.1 AGGAGGAGGGCGAGCGATTGAATTGCAAAAGACAAACTACCTTCATGATCGGATGCTCCGCTCCGAGTGGCAGAGCAAGTGGTTTTT 14 20018963 0.95868457 7 13 63 0.941176471 0.903089987 0.294117647 0.214285714 0.352941176 14 0 1 16 3R:20018895-20018981 6 CG4433 FBtr0307345|FBtr0344139|FBtr0083843 20018580|20018267|20018580 20018985|20018985|20018985 GAATTG 6mer2-7 dme-miR-932-5p 3R - 20018895 20019007 stop_codon CG4433 FlyBase G39808.1 AATGCAGATACATGACAACTAACAGGAGGAGGAGGGCGAGCGATTGAATTGCAAAAGACAAACTACCTTCATGATCGGATGCTCCGCTCCGAGTGGCAGAGCAAGTGGTTTTT 14 20018963 0.982817464 7 13 48 0.904761905 1.278753601 0.047619048 0.357142857 0.571428571 14 2 0 19 3R:20018895-20019007 6 6 2902 FBgn0038763 673 36.29333333 55.97666667 0.008915305 0.165319618 0.107187519 1 1 1 0.15 dme-miR-932-5p 6mer2-7 GAATTG 3R 20301533 20301538 + 3R_20301533_20301538_+ 0.99998353 0.999204965 0.999594247 0.000550483 cic FBtr0334305 20300626 20303942 3R + 20301442 20301549 3'utr cic FlyBase G44096.1 CGCACATCTACAAGCGCTTTTAAACTGTTTGCTTTTGTTCTCAAAGTTTATGCAACACGCGAACCTTTTTAAATTGTATGTACATTTCCTTGAATTGGCTTTTTACAC 18 20301510 0.986352539 12 16 139 0.947368421 1.255272505 0.368421053 0.055555556 0.105263158 18 1 0 18 3R:20301442-20301549 6 cic FBtr0334305 20300626 20303942 GAATTG 6mer2-7 dme-miR-932-5p 3R + 20301418 20301562 3'utr cic FlyBase G33315.1 AAAACCCCCAAACTAACACCCAATCGCACATCTACAAGCGCTTTTAAACTGTTTGCTTTTGTTCTCAAAGTTTATGCAACACGCGAACCTTTTTAAATTGTATGTACATTTCCTTGAATTGGCTTTTTACACTGTTGTCTAATTG 18 20301536 0.98932963 11 16 162 1 1.361727836 0.086956522 0.277777778 0.434782609 18 0 0 23 3R:20301418-20301562 6 6.5 2903 FBgn0262582 2700.526667 30.66 46.83666667 0.002406938 0.212002609 0.138780158 23 -3 10 0.15 dme-miR-7-5p 8mer-A1 GTCTTCCA 3R 20301716 20301723 + 3R_20301716_20301723_+ 0.675380345 0.675379939 0.675380142 2.83E-07 cic FBtr0334305 20300626 20303942 3R + 20301608 20301738 3'utr cic FlyBase G44097.1 TAAATTGTAAACATACCGAAAAATAAACTCTAAAAAGAAAATAATTCAAAAAACTTATTACCGACGATTGAAAGAATACAAACCAGAGAGAGAATGAGAGAACTAACTGTCTTCCACTGTTGCTGCAATAT 384 20301702 0.928908577 21 359 1960 0.939953811 1.831443159 0.233256351 0.1171875 0.217090069 384 21 5 407 3R:20301608-20301738 8 cic FBtr0334305 20300626 20303942 GTCTTCCA 8mer-A1 dme-miR-7-5p 3R + 20301647 20301850 3'utr cic FlyBase G33316.1 AATAATTCAAAAAACTTATTACCGACGATTGAAAGAATACAAACCAGAGAGAGAATGAGAGAACTAACTGTCTTCCACTGTTGCTGCAATATACTATTTAATATTGTTTACCATTTCGGTTCGATTAAATTTAGTTGTAAATTAATGTTTTAAGTATGGACTGCATTTTATTCATATGCAAAATTCTGTTCATTGTGAGTTGTT 221 20301702 0.9341476 31 208 1341 0.93993994 1.893484346 0.243243243 0.371040724 0.582582583 221 17 3 313 3R:20301647-20301850 8 231 2904 FBgn0262582 2700.526667 30.66 46.83666667 0.08553887 7.534246575 4.932033307 14 14 14 0.15 dme-miR-307a-3p 7mer-A1 GTTGTGA 3R 20323684 20323690 + 3R_20323684_20323690_+ 0.618625971 0.785052549 0.70183926 0.117681307 CG42668 FBtr0306634|FBtr0302668|FBtr0302670|FBtr0302667|FBtr0306633|FBtr0302673|FBtr0303586|FBtr0302669 20323448|20323448|20323448|20323448|20323448|20323448|20323448|20323448 20324196|20324196|20324196|20324196|20324196|20324196|20324196|20324196 3R + 20323579 20323726 3'utr CG42668 FlyBase G44126.1 GACAACGTATATATACTTTACTGAATTGTACATTTGGTCCTACTCAAATGCCTTCGCACGCTGCCAGATATATAAGCCCGACCGAGGCGCGTGGCCAGAACATCCGTTGTGAGAAAGTCTAATCACGAACTATGTCTAGGATTAAGTG 44 20323684 0.961961574 17 41 255 0.944444444 1.707570176 0.351851852 0.181818182 0.333333333 44 3 0 51 3R:20323579-20323726 7 CG42668 FBtr0302667|FBtr0302670|FBtr0302668|FBtr0306634|FBtr0302669|FBtr0303586|FBtr0302673|FBtr0306633 20323448|20323448|20323448|20323448|20323448|20323448|20323448|20323448 20324196|20324196|20324196|20324196|20324196|20324196|20324196|20324196 GTTGTGA 7mer-A1 dme-miR-307a-3p 3R + 20323613 20323726 3'utr CG42668 FlyBase G33342.2 TGGTCCTACTCAAATGCCTTCGCACGCTGCCAGATATATAAGCCCGACCGAGGCGCGTGGCCAGAACATCCGTTGTGAGAAAGTCTAATCACGAACTATGTCTAGGATTAAGTG 29 20323686 0.886643324 9 21 109 0.872727273 1.079181246 0.327272727 0.620689655 0.8 29 4 3 48 3R:20323613-20323726 7 8 2905 FBgn0261550 4720.296667 135.9533333 209.03 0.001694809 0.058843721 0.038272018 0 -2 -1 0.15 dme-miR-1012-3p 6mer2-7 TGACTA 3R 20325113 20325118 - 3R_20325113_20325118_- 0.999485527 0.999757618 0.999621573 0.000192404 CG4360 FBtr0083899|FBtr0113252 20324272|20324272 20325628|20326217 3R - 20325067 20325192 3'utr CG4360 FlyBase G52775.1 GCTTTTCAAAGCTTTGTAAATGAATCATCGGCGTCTTTTTAAGTTTGGTTGCTGTTTTCGAATGGCAAGGAAAATGACTACAATAAATTTAGATGTGACCTACTTTGCACAATAACCTTTTATGCC 16 20325118 0.985350791 11 15 129 0.944444444 1.230448921 0.222222222 0.0625 0.166666667 16 1 0 17 3R:20325067-20325192 6 CG4360 FBtr0083899|FBtr0113252 20324272|20324272 20325628|20326217 TGACTA 6mer2-7 dme-miR-1012-3p 3R - 20325094 20325151 3'utr CG4360 FlyBase G39828.1 AGTTTGGTTGCTGTTTTCGAATGGCAAGGAAAATGACTACAATAAATTTAGATGTGAC 6 20325130 0.869581263 5 6 42 1 0.903089987 0.5 0.333333333 0.5 6 0 0 8 3R:20325094-20325151 6 4 2906 FBgn0038787 2517.203333 86.49333333 132.24 0.001589065 0.046246339 0.030248034 0 12 6 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 3R 20325438 20325443 - 3R_20325438_20325443_- 0.91857699 0.913621346 0.916099168 0.003504209 CG4360 FBtr0083899|FBtr0113252 20324272|20324272 20325628|20326217 3R - 20325408 20325465 3'utr CG4360 FlyBase G52777.1 ATATATACTCGAAAGTGTTATTTACCTGCTGTGCAGAGCGCAATTGTATGTAACTATA 54 20325445 0.975460906 7 52 445 0.984126984 1.792391689 0.253968254 0.148148148 0.26984127 54 1 0 62 3R:20325408-20325465 6 CG4360 FBtr0083899|FBtr0113252 20324272|20324272 20325628|20326217 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 3R - 20325304 20325580 3'utr CG4360 FlyBase G39829.1 AGCCAGCCAGTCAAGCAGCCATTGAGGAATAGTGCAATATGCATGCCACATAGCACATACACTTATAGATCGCATATACGGCATACGAATACGATTACATGAATACTATATTTGAATATATACTCGAAAGTGTTATTTACCTGCTGTGCAGAGCGCAATTGTATGTAACTATATCGTAGAGAGCTGATCCACATGCGTGTCCAATTGTAAATTAAGGCTAGCCGTGTTGGCATAAGCCACAGATGATATGATACAGGGTGTTTAGGCCTAAACTCTA 96 20325445 0.980148801 29 92 635 0.95890411 1.669006781 0.226027397 0.427083333 0.623287671 96 4 2 140 3R:20325304-20325580 6 49 2907 FBgn0038787 2517.203333 86.49333333 132.24 0.019466048 0.566517651 0.370538415 2 2 2 0.15 dme-miR-276a-3p 6mer2-7 GTTCCT 3R 20325694 20325699 - 3R_20325694_20325699_- 0.999991319 0.998936299 0.999463809 0.000745998 CG4360 FBtr0113252 20324272 20326217 3R - 20325674 20325719 3'utr CG4360 FlyBase G52779.1 CGGTGAAAAGCCCTACAACTGTTCCTTTTGTCCTAAACAGTTCCGG 15 20325699 0.979081807 6 13 126 0.882352941 0.698970004 0 0.133333333 0.235294118 15 0 2 15 3R:20325674-20325719 6 CG4360 FBtr0113252 20324272 20326217 GTTCCT 6mer2-7 dme-miR-276a-3p 3R - 20325673 20325711 3'utr CG4360 FlyBase G39830.1 AGCCCTACAACTGTTCCTTTTGTCCTAAACAGTTCCGGC 6 20325695 0.984407809 4 5 43 0.888888889 0.903089987 0 0.5 0.666666667 6 1 0 8 3R:20325673-20325711 6 10.5 2908 FBgn0038787 2517.203333 86.49333333 132.24 0.004171296 0.121396639 0.079401089 0 -4 -2 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 20325771 20325776 - 3R_20325771_20325776_- 0.755358524 0.755189022 0.755273773 0.000119855 CG4360 FBtr0113252|FBtr0113252|FBtr0113252 20324272|20324272|20324272 20326217|20326217|20326217 3R - 20325742 20325795 3'utr CG4360 FlyBase G52780.1 AGCCCTACAAGTGCAAGATCTGTGAGGTCAACTTCCGGCAGGTGGCCACGCTGA 12 20325777 0.912384647 6 12 62 1 1.146128036 0 0.166666667 0.285714286 12 0 0 14 3R:20325742-20325795 6 CG4360 FBtr0113252|FBtr0113252|FBtr0113252 20324272|20324272|20324272 20326217|20326217|20326217 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 20325748 20325795 3'utr CG4360 FlyBase G39831.1 AGCCCTACAAGTGCAAGATCTGTGAGGTCAACTTCCGGCAGGTGGCCA 8 20325777 0.910315001 3 8 41 1 1.113943352 0.307692308 0.375 0.615384615 8 0 0 13 3R:20325748-20325795 6 10 2909 FBgn0038787 2517.203333 86.49333333 132.24 0.003972663 0.115615847 0.075620085 1 1 1 0.15 dme-miR-33-5p 7mer-m8 CAATGCA 3R 20535895 20535901 - 3R_20535895_20535901_- 0.662940004 0.437183954 0.550061979 0.159633598 Stat92E FBtr0334584|FBtr0089486|FBtr0089485|FBtr0089487|FBtr0100457|FBtr0334582|FBtr0334586|FBtr0334581|FBtr0334583|FBtr0089484 20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535321|20535691|20535691 20537408|20537408|20537408|20537408|20537408|20538528|20537408|20537408|20537408|20537408 3R - 20535795 20535938 3'utr Stat92E FlyBase G52794.1 TGAAACTTGTTTGTTTGAGTCATCAGGGCAGAGTTTGCAATGCATTTCAAATGCGCCACATGCGATTGCCTTTTTAGTCAGCTATTAGAGACACGAGGACCATATTACGTTTGTTTGAGAGATCGTAAACATAATCATTTATGT 34 20535916 0.867330245 16 31 259 0.888888889 1.505149978 0.25 0.058823529 0.111111111 34 4 0 32 3R:20535795-20535938 7 Stat92E FBtr0100457|FBtr0089487|FBtr0334581|FBtr0089485|FBtr0334584|FBtr0089486|FBtr0089484|FBtr0334583|FBtr0334586|FBtr0334582 20535691|20535691|20535321|20535691|20535691|20535691|20535691|20535691|20535691|20535691 20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20538528 CAATGCA 7mer-m8 dme-miR-33-5p 3R - 20535888 20535930 3'utr Stat92E FlyBase G39845.1 GTTTGTTTGAGTCATCAGGGCAGAGTTTGCAATGCATTTCAAA 11 20535916 0.973915774 5 10 62 0.9375 0.875061263 0.375 0.363636364 0.5625 11 0 1 15 3R:20535888-20535930 7 3.5 2910 FBgn0016917 6780.14 209.8333333 320.8166667 0.000516214 0.016679905 0.010909658 15 15 15 0.15 dme-miR-932-5p 6mer2-7 GAATTG 3R 20536017 20536022 - 3R_20536017_20536022_- 0.999750551 0.978499068 0.989124809 0.01502708 Stat92E FBtr0334584|FBtr0089486|FBtr0089485|FBtr0089487|FBtr0100457|FBtr0334582|FBtr0334586|FBtr0334581|FBtr0334583|FBtr0089484 20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535321|20535691|20535691 20537408|20537408|20537408|20537408|20537408|20538528|20537408|20537408|20537408|20537408 3R - 20535953 20536115 3'utr Stat92E FlyBase G52795.1 AAGCCTATGTTAAACGAAAGTGGAAAAACAATCAACGAGAGCAGCAACGCAGGGATTGATTGCTTTAATTTTAGTTATAATCTAAGTAAGATTGAATTGCTTTATGTAACCCCATCCTTTATTGGCTTCCAATGCTGAAAATGCGCAAAAATTTGAACTAATC 60 20536020 0.999984639 18 58 474 0.97260274 1.550228353 0.232876712 0.166666667 0.315068493 60 1 1 71 3R:20535953-20536115 6 Stat92E FBtr0100457|FBtr0089487|FBtr0334581|FBtr0089485|FBtr0334584|FBtr0089486|FBtr0089484|FBtr0334583|FBtr0334586|FBtr0334582 20535691|20535691|20535321|20535691|20535691|20535691|20535691|20535691|20535691|20535691 20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20538528 GAATTG 6mer2-7 dme-miR-932-5p 3R - 20535934 20536066 3'utr Stat92E FlyBase G39846.1 CAGGGATTGATTGCTTTAATTTTAGTTATAATCTAAGTAAGATTGAATTGCTTTATGTAACCCCATCCTTTATTGGCTTCCAATGCTGAAAATGCGCAAAAATTTGAACTAATCAATGTATATTTTTTTGAAA 44 20536020 0.986791595 20 42 366 0.966101695 1.45484486 0.084745763 0.272727273 0.457627119 44 1 1 57 3R:20535934-20536066 6 28.5 2911 FBgn0016917 6780.14 209.8333333 320.8166667 0.004203453 0.135822081 0.088835784 -2 -2 -2 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 20536257 20536262 - 3R_20536257_20536262_- 0.999938498 0.999954226 0.999946362 1.11E-05 Stat92E FBtr0334584|FBtr0334584|FBtr0334584|FBtr0089486|FBtr0089486|FBtr0089486|FBtr0089485|FBtr0089485|FBtr0089485|FBtr0089487|FBtr0089487|FBtr0089487|FBtr0100457|FBtr0100457|FBtr0100457|FBtr0334582|FBtr0334582|FBtr0334582|FBtr0334586|FBtr0334586|FBtr0334586|FBtr0334581|FBtr0334581|FBtr0334581|FBtr0334583|FBtr0334583|FBtr0334583|FBtr0089484|FBtr0089484|FBtr0089484 20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535321|20535321|20535321|20535691|20535691|20535691|20535691|20535691|20535691 20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20538528|20538528|20538528|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408 3R - 20536129 20536314 3'utr Stat92E FlyBase G52796.1 CTTTTATATATGTATACATATGATTTCAATTTGTGCACTATGACGTGTTCGTCTGTGACAAAGCATTACGTTTAGATGATACTGACAAAATAATCGGTTTAGTTAGTGAGTAACTATTTGTTGAATCTAAATTTTTGATTTTGATTTTAATTTTATGGCCTAATTTTAAAACTTTGATATACAATT 276 20536263 0.855399416 35 263 2215 0.953216374 2.212187604 0.266081871 0.202898551 0.356725146 276 15 1 326 3R:20536129-20536314 6 Stat92E FBtr0100457|FBtr0100457|FBtr0100457|FBtr0089487|FBtr0089487|FBtr0089487|FBtr0334581|FBtr0334581|FBtr0334581|FBtr0089485|FBtr0089485|FBtr0089485|FBtr0334584|FBtr0334584|FBtr0334584|FBtr0089486|FBtr0089486|FBtr0089486|FBtr0089484|FBtr0089484|FBtr0089484|FBtr0334583|FBtr0334583|FBtr0334583|FBtr0334586|FBtr0334586|FBtr0334586|FBtr0334582|FBtr0334582|FBtr0334582 20535691|20535691|20535691|20535691|20535691|20535691|20535321|20535321|20535321|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691 20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20538528|20538528|20538528 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 20536200 20536313 3'utr Stat92E FlyBase G39849.1 TTTTATATATGTATACATATGATTTCAATTTGTGCACTATGACGTGTTCGTCTGTGACAAAGCATTACGTTTAGATGATACTGACAAAATAATCGGTTTAGTTAGTGAGTAACT 150 20536263 0.812100701 24 142 1134 0.935779817 1.832508913 0.23853211 0.36 0.559633028 150 12 2 204 3R:20536200-20536313 6 127.5 2912 FBgn0016917 6780.14 209.8333333 320.8166667 0.018804921 0.607625099 0.397423243 1 1 1 0.15 dme-miR-970-3p 6mer2-7 CTTATG 3R 20536388 20536393 - 3R_20536388_20536393_- 0.928304845 0.53929637 0.733800607 0.275070478 Stat92E FBtr0334584|FBtr0089486|FBtr0089485|FBtr0089487|FBtr0100457|FBtr0334582|FBtr0334586|FBtr0334581|FBtr0334583|FBtr0089484 20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535321|20535691|20535691 20537408|20537408|20537408|20537408|20537408|20538528|20537408|20537408|20537408|20537408 3R - 20536333 20536516 3'utr Stat92E FlyBase G52797.1 AACATCAACATCAATAAGATCTAGCCGATCAATGCATGCAAATTGAGCACCTCAACACAAACACCTTCAGCTCACAGCCAGAACATTGTCTATATAATATATCGTGATTATGATTGTGTCTGACTTATGCAAAATTTAGAATTTCTGTGTTGTATAAACCTTTGGAATGTGTCCGCACGTTGTT 128 20536407 0.84850031 40 123 1037 0.95 2.181843588 0.13125 0.1796875 0.34375 128 8 0 152 3R:20536333-20536516 6 Stat92E FBtr0100457|FBtr0089487|FBtr0334581|FBtr0089485|FBtr0334584|FBtr0089486|FBtr0089484|FBtr0334583|FBtr0334586|FBtr0334582 20535691|20535691|20535321|20535691|20535691|20535691|20535691|20535691|20535691|20535691 20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20538528 CTTATG 6mer2-7 dme-miR-970-3p 3R - 20536335 20536501 3'utr Stat92E FlyBase G39850.1 AAGATCTAGCCGATCAATGCATGCAAATTGAGCACCTCAACACAAACACCTTCAGCTCACAGCCAGAACATTGTCTATATAATATATCGTGATTATGATTGTGTCTGACTTATGCAAAATTTAGAATTTCTGTGTTGTATAAACCTTTGGAATGTGTCCGCACGTTG 78 20536405 0.987633102 28 76 679 0.966386555 2.06069784 0.243697479 0.384615385 0.596638655 78 4 0 115 3R:20536335-20536501 6 29.5 2913 FBgn0016917 6780.14 209.8333333 320.8166667 0.004350943 0.140587768 0.091952829 14 12 13 0.15 dme-miR-184-3p 7mer-m8 TCCGTCC 3R 20538315 20538321 - 3R_20538315_20538321_- 0.660711896 0.450697874 0.555704885 0.148502324 Stat92E FBtr0334585 20538134 20538528 3R - 20538301 20538333 3'utr Stat92E FlyBase G52799.1 TCATCCGATCGATCCGTCCTGACCATCATCTCC 6 20538313 0.730722845 4 5 28 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 3R:20538301-20538333 7 Stat92E FBtr0334585 20538134 20538528 TCCGTCC 7mer-m8 dme-miR-184-3p 3R - 20538305 20538336 3'utr Stat92E FlyBase G39853.1 CTCTCATCCGATCGATCCGTCCTGACCATCAT 5 20538314 0.916419868 3 5 26 1 0.903089987 0.125 0.4 0.625 5 0 0 8 3R:20538305-20538336 7 5 2914 FBgn0016917 6780.14 209.8333333 320.8166667 0.000737448 0.023828435 0.015585225 -8 -7 -7.5 0.15 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 20572792 20572797 + 3R_20572792_20572797_+ 0.962597033 0.988094487 0.97534576 0.018029455 CG5191 FBtr0345213|FBtr0083907|FBtr0083904|FBtr0083906|FBtr0083905|FBtr0083908 20572462|20572462|20572462|20572462|20572462|20572462 20573000|20573000|20573000|20573000|20573000|20573000 3R + 20572791 20572836 3'utr CG5191 FlyBase G44144.1 GAGCTGTACATCGTATTCGTATTCGTAATCGTATTATCTTTACCTA 6 20572806 0.968920589 5 6 56 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3R:20572791-20572836 6 CG5191 FBtr0083905|FBtr0083908|FBtr0083904|FBtr0083906|FBtr0345213|FBtr0083907 20572462|20572462|20572462|20572462|20572462|20572462 20573000|20573000|20573000|20573000|20573000|20573000 AGCTGT 6mer3-8 dme-miR-1008-3p 3R + 20572790 20572837 3'utr CG5191 FlyBase G33360.1 TGAGCTGTACATCGTATTCGTATTCGTAATCGTATTATCTTTACCTAT 6 20572806 0.993222152 4 5 64 0.888888889 0.903089987 0 0.5 0.666666667 6 1 0 8 3R:20572790-20572837 6 3 2915 FBgn0038803 157 7.076666667 10.67333333 0.01910828 0.423928403 0.281074329 -14 -14 -14 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 20581843 20581849 - 3R_20581843_20581849_- 0.80074732 0.801677186 0.801212253 0.000657539 CG16953 FBtr0300803|FBtr0300803|FBtr0300803 20581768|20581768|20581768 20582499|20582499|20582499 3R - 20581815 20581885 3'utr CG16953 FlyBase G52839.1 CATCACACACTTAACACGCGCGACACAAATATTCATTGTGATAGAAATAGAACAAACAGTATGTACGTTTA 98 20581850 0.684349813 9 86 609 0.868421053 1.393575203 0.289473684 0.12244898 0.245614035 98 12 3 99 3R:20581815-20581885 7 CG16953 FBtr0300803|FBtr0300803|FBtr0300803 20581768|20581768|20581768 20582499|20582499|20582499 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 20581779 20581877 3'utr CG16953 FlyBase G39887.1 ACTTAACACGCGCGACACAAATATTCATTGTGATAGAAATAGAACAAACAGTATGTACGTTTACTAAAACGAAAAGTTTGAAGAAAACCCGTATACTTA 47 20581850 0.801804783 10 44 305 0.953846154 1.315270435 0.184615385 0.319148936 0.507692308 47 1 2 62 3R:20581779-20581877 7 67 2916 FBgn0038809 1215.62 52.09333333 79.63 0.055115908 1.286153059 0.841391435 1 1 1 0.15 dme-miR-14-3p 7mer-m8 AAGACTG 3R 20582041 20582047 - 3R_20582041_20582047_- 0.671146398 0.670759261 0.67095283 0.000273721 CG16953 FBtr0300803 20581768 20582499 3R - 20582004 20582158 3'utr CG16953 FlyBase G52841.1 ACGCACACACTTGCTCATCGATGGCCAAAATGTGGAGTAACAAGCATCCATTGGACCGCAATCAGTTCCAGGATTTGGGAACGCAACTGCAGATCCCTTTGGATATTGATAAAGACTGTCTTTGTTCTAAAAGCAAAAGTAAATCTGGTTAAAAA 84 20582050 0.905696364 22 80 529 0.958762887 1.968482949 0.092783505 0.119047619 0.237113402 84 4 0 93 3R:20582004-20582158 7 CG16953 FBtr0300803 20581768 20582499 AAGACTG 7mer-m8 dme-miR-14-3p 3R - 20582025 20582096 3'utr CG16953 FlyBase G39889.1 CAGTTCCAGGATTTGGGAACGCAACTGCAGATCCCTTTGGATATTGATAAAGACTGTCTTTGTTCTAAAAGC 27 20582050 0.908371874 10 24 224 0.928571429 1.290034611 0.238095238 0.333333333 0.571428571 27 2 1 39 3R:20582025-20582096 7 25 2917 FBgn0038809 1215.62 52.09333333 79.63 0.020565637 0.479907858 0.313952028 3 3 3 0.15 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 3R 20582201 20582206 - 3R_20582201_20582206_- 0.837599104 0.84153556 0.839567332 0.002783526 CG16953 FBtr0300803|FBtr0300803 20581768|20581768 20582499|20582499 3R - 20582159 20582228 3'utr CG16953 FlyBase G52842.1 GAATCTTTTTTACGTTTCCAAATACTTATCGTCCCCTACGTTACCATTGTAATCATCTCCTTTGAACATT 10 20582202 0.989512395 7 7 80 0.714285714 1 0.142857143 0.2 0.428571429 10 4 0 10 3R:20582159-20582228 6 CG16953 FBtr0300803|FBtr0300803 20581768|20581768 20582499|20582499 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 3R - 20582172 20582238 3'utr CG16953 FlyBase G39891.1 AGAGATGATAGAATCTTTTTTACGTTTCCAAATACTTATCGTCCCCTACGTTACCATTGTAATCATC 10 20582202 0.985316298 8 9 71 0.882352941 1.176091259 0.176470588 0.5 0.705882353 10 2 0 15 3R:20582172-20582238 6 4.5 2918 FBgn0038809 1215.62 52.09333333 79.63 0.003701815 0.086383414 0.056511365 -4 -4 -4 0.15 dme-miR-8-3p 6mer2-7 AGTATT 3R 20586141 20586146 - 3R_20586141_20586146_- 0.999560661 1 0.99978033 0.000310632 2-Sep FBtr0334579|FBtr0083945 20586127|20586127 20586345|20586345 3R - 20586131 20586210 3'utr 2-Sep FlyBase G52853.1 TACACGCATATGTACGCAGGCATATAATGATTATGTATTTACAACTAACGAATAAATCGAACTTAGTATTTTAACAAAGT 19 20586140 0.757763503 10 19 129 1 1.397940009 0.04 0.315789474 0.48 19 0 0 25 3R:20586131-20586210 6 2-Sep FBtr0334579|FBtr0083945 20586127|20586127 20586345|20586345 AGTATT 6mer2-7 dme-miR-8-3p 3R - 20586135 20586170 3'utr 2-Sep FlyBase G39899.1 ACAACTAACGAATAAATCGAACTTAGTATTTTAACA 6 20586140 0.976731561 2 6 46 1 1 0.2 0.666666667 0.8 6 0 0 10 3R:20586135-20586170 6 8 2919 FBgn0014029 1104 83.25 126.7633333 0.007246377 0.096096096 0.063109732 -6 -6 -6 0.15 dme-miR-2535b-3p 7mer-A1 CGTGAGA 3R 20611137 20611143 + 3R_20611137_20611143_+ 0.770062549 0.781552891 0.77580772 0.00812494 bon FBtr0334639|FBtr0334637|FBtr0330043|FBtr0300617|FBtr0334638|FBtr0083912 20610835|20610835|20611057|20610835|20610835|20610835 20612540|20612540|20612540|20611624|20612540|20612540 3R + 20611104 20611154 3'utr bon FlyBase G44184.1 TGAGAAATCGATCCGTAGGCTTGCCCCCACAATCGTGAGACACACATACAT 11 20611139 0.938032697 3 11 42 1 1.176091259 0 0.272727273 0.466666667 11 0 0 15 3R:20611104-20611154 7 bon FBtr0334638|FBtr0083912|FBtr0330043|FBtr0300617|FBtr0334639|FBtr0334637 20610835|20610835|20611057|20610835|20610835|20610835 20612540|20612540|20612540|20611624|20612540|20612540 CGTGAGA 7mer-A1 dme-miR-2535b-3p 3R + 20611111 20611162 3'utr bon FlyBase G33384.1 TCGATCCGTAGGCTTGCCCCCACAATCGTGAGACACACATACATCTAAACAA 7 20611139 0.897487346 3 7 23 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 3R:20611111-20611162 7 7 2920 FBgn0023097 953.03 20.03333333 30.79333333 0.007344994 0.349417637 0.227321931 -2 -2 -2 0.15 dme-miR-932-5p 7mer-A1 GAATTGA 3R 20611312 20611318 + 3R_20611312_20611318_+ 0.798085817 0.801902733 0.799994275 0.002698956 bon FBtr0334639|FBtr0334637|FBtr0330043|FBtr0300617|FBtr0334638|FBtr0083912 20610835|20610835|20611057|20610835|20610835|20610835 20612540|20612540|20612540|20611624|20612540|20612540 3R + 20611273 20611440 3'utr bon FlyBase G44185.1 ACGTACAATGGAATAAATTGAATCCCCTTGGGCGATCGAGAATTGAAATGAGATATGTTTAGCTAAATTTTAAGTGTTGAATATCCATAAACATTGATATAAATATAACTATAAATATGTATACCTTTCATTAGGGATCCACTAGAGATTAAAAATAGGTGTAAGTGT 30 20611315 0.978607654 15 29 205 0.96969697 1.505149978 0.181818182 0.1 0.181818182 30 1 0 32 3R:20611273-20611440 7 bon FBtr0334638|FBtr0083912|FBtr0330043|FBtr0300617|FBtr0334639|FBtr0334637 20610835|20610835|20611057|20610835|20610835|20610835 20612540|20612540|20612540|20611624|20612540|20612540 GAATTGA 7mer-A1 dme-miR-932-5p 3R + 20611273 20611338 3'utr bon FlyBase G33386.1 ACGTACAATGGAATAAATTGAATCCCCTTGGGCGATCGAGAATTGAAATGAGATATGTTTAGCTAA 18 20611315 0.972968995 7 18 108 1 1.431363764 0.185185185 0.388888889 0.592592593 18 0 0 27 3R:20611273-20611338 7 14.5 2921 FBgn0023097 953.03 20.03333333 30.79333333 0.015214631 0.723793677 0.470881143 -3 -3 -3 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 20611535 20611541 + 3R_20611535_20611541_+ 0.801919068 0.80192218 0.801920624 2.19E-06 bon FBtr0334639|FBtr0334639|FBtr0334639|FBtr0334637|FBtr0334637|FBtr0334637|FBtr0330043|FBtr0330043|FBtr0330043|FBtr0300617|FBtr0300617|FBtr0300617|FBtr0334638|FBtr0334638|FBtr0334638|FBtr0083912|FBtr0083912|FBtr0083912 20610835|20610835|20610835|20610835|20610835|20610835|20611057|20611057|20611057|20610835|20610835|20610835|20610835|20610835|20610835|20610835|20610835|20610835 20612540|20612540|20612540|20612540|20612540|20612540|20612540|20612540|20612540|20611624|20611624|20611624|20612540|20612540|20612540|20612540|20612540|20612540 3R + 20611448 20611553 3'utr bon FlyBase G44186.1 CGAGTGAAATTGACATCCTTGTTTCACCGATTTGTGTTTGGGATGGAACCCGTTCTAACCAATCTTTGTTGGAATTGTATTTACTTTTGTGATAGCGAAAAACAAT 89 20611533 0.988943185 18 82 774 0.914529915 1.330413773 0.179487179 0.213483146 0.401709402 89 6 4 107 3R:20611448-20611553 7 bon FBtr0334638|FBtr0334638|FBtr0334638|FBtr0083912|FBtr0083912|FBtr0083912|FBtr0330043|FBtr0330043|FBtr0330043|FBtr0300617|FBtr0300617|FBtr0300617|FBtr0334639|FBtr0334639|FBtr0334639|FBtr0334637|FBtr0334637|FBtr0334637 20610835|20610835|20610835|20610835|20610835|20610835|20611057|20611057|20611057|20610835|20610835|20610835|20610835|20610835|20610835|20610835|20610835|20610835 20612540|20612540|20612540|20612540|20612540|20612540|20612540|20612540|20612540|20611624|20611624|20611624|20612540|20612540|20612540|20612540|20612540|20612540 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 20611514 20611577 3'utr bon FlyBase G33387.2 TGTTGGAATTGTATTTACTTTTGTGATAGCGAAAAACAATAAGATGAACAAATTACCGTTTATT 54 20611533 0.797691555 12 49 448 0.905405405 1.224014811 0.189189189 0.296296296 0.486486486 54 4 3 67 3R:20611514-20611577 7 49.5 2922 FBgn0023097 953.03 20.03333333 30.79333333 0.051939603 2.470881864 1.607490799 2 2 2 0.15 dme-miR-305-3p 6mer3-8 ATGTGC 3R 20611711 20611716 + 3R_20611711_20611716_+ 0.707425671 0.896866765 0.802146218 0.133955086 bon FBtr0334639|FBtr0334637|FBtr0330043|FBtr0334638|FBtr0083912 20610835|20610835|20611057|20610835|20610835 20612540|20612540|20612540|20612540|20612540 3R + 20611600 20611735 3'utr bon FlyBase G44188.1 AAATTAAACAATGTGGCAAAGTTCTACCATCATTTCGAATTTGACATGTACGATATTTATTGACTATTGACCGCTAACCCCATCCATCGGTAGAATCTAATTAGGACGCTCATGTGCAGCTCCCTAAGCTCCTAAG 24 20611712 0.976847418 12 23 149 0.958333333 1.06069784 0.291666667 0 0 24 0 1 23 3R:20611600-20611735 6 bon FBtr0334638|FBtr0083912|FBtr0330043|FBtr0334639|FBtr0334637 20610835|20610835|20611057|20610835|20610835 20612540|20612540|20612540|20612540|20612540 ATGTGC 6mer3-8 dme-miR-305-3p 3R + 20611651 20611728 3'utr bon FlyBase G33388.1 GATATTTATTGACTATTGACCGCTAACCCCATCCATCGGTAGAATCTAATTAGGACGCTCATGTGCAGCTCCCTAAGC 15 20611711 0.702053639 7 12 84 0.833333333 1.301029996 0.125 0.4 0.625 15 4 0 20 3R:20611651-20611728 6 7.5 2923 FBgn0023097 953.03 20.03333333 30.79333333 0.007869637 0.37437604 0.243559212 -1 0 -0.5 0.15 dme-miR-79-3p 6mer2-7 AGCTTT 3R 20612000 20612005 + 3R_20612000_20612005_+ 0.999997723 0.866917212 0.933457467 0.094102124 bon FBtr0334639|FBtr0334637|FBtr0330043|FBtr0334638|FBtr0083912 20610835|20610835|20611057|20610835|20610835 20612540|20612540|20612540|20612540|20612540 3R + 20611987 20612018 3'utr bon FlyBase G44190.2 CCGACACAGAATCAGCTTTTCATATATATTTA 7 20611999 0.930856062 2 6 48 0.888888889 0.602059991 0 0.285714286 0.444444444 7 0 1 8 3R:20611987-20612018 6 bon FBtr0334638|FBtr0083912|FBtr0330043|FBtr0334639|FBtr0334637 20610835|20610835|20611057|20610835|20610835 20612540|20612540|20612540|20612540|20612540 AGCTTT 6mer2-7 dme-miR-79-3p 3R + 20611975 20612053 3'utr bon FlyBase G33391.1 ACATAAATATTTCCGACACAGAATCAGCTTTTCATATATATTTATATAAATATATATGTATGTATATCTTTAGCCGACC 7 20611998 0.976848981 4 7 59 1 1.146128036 0 0.571428571 0.785714286 7 0 0 14 3R:20611975-20612053 6 5 2924 FBgn0023097 953.03 20.03333333 30.79333333 0.005246425 0.249584027 0.162372808 1 2 1.5 0.15 dme-miR-1002-5p 7mer-m8 CTACTTA 3R 20612493 20612499 + 3R_20612493_20612499_+ 0.352680171 0.396488481 0.374584326 0.030977146 bon FBtr0334639|FBtr0334637|FBtr0330043|FBtr0334638|FBtr0083912 20610835|20610835|20611057|20610835|20610835 20612540|20612540|20612540|20612540|20612540 3R + 20612455 20612514 3'utr bon FlyBase G44191.1 TTACGATAACTAAAGATTAACCACTGTATATGAATGTACTACTTACTATCGAGTGGATTA 110 20612489 0.987030846 7 109 960 0.992592593 1.826074803 0.096296296 0.190909091 0.340740741 110 0 1 134 3R:20612455-20612514 7 bon FBtr0334638|FBtr0083912|FBtr0330043|FBtr0334639|FBtr0334637 20610835|20610835|20611057|20610835|20610835 20612540|20612540|20612540|20612540|20612540 CTACTTA 7mer-m8 dme-miR-1002-5p 3R + 20612421 20612513 3'utr bon FlyBase G33393.1 ATGGAAATTATTTTATCTGTTTTAGCCGTAAGTTTTACGATAACTAAAGATTAACCACTGTATATGAATGTACTACTTACTATCGAGTGGATT 43 20612489 0.98762028 7 43 390 1 1.806179974 0.109375 0.372093023 0.578125 43 0 0 64 3R:20612421-20612513 7 74.5 2925 FBgn0023097 953.03 20.03333333 30.79333333 0.078171726 3.718801997 2.419354839 4 4 4 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 3R 20620566 20620571 + 3R_20620566_20620571_+ 0.569924109 0.563337546 0.566630828 0.00465743 CG5466 FBtr0083913 20620354 20621269 3R + 20620531 20620588 3'utr CG5466 FlyBase G44193.1 GTTCAACACAAGACTTGATTTCACATTTTCCACATTTGACTGACCTTTAGGCATACAT 24 20620565 0.807187818 7 24 202 1 1.431363764 0.037037037 0.125 0.222222222 24 0 0 27 3R:20620531-20620588 6 CG5466 FBtr0083913 20620354 20621269 TTGACT 6mer3-8 dme-miR-1012-3p 3R + 20620525 20620588 3'utr CG5466 FlyBase G33394.1 TGCCATGTTCAACACAAGACTTGATTTCACATTTTCCACATTTGACTGACCTTTAGGCATACAT 24 20620566 0.741562548 12 22 201 0.948717949 1.267171728 0 0.375 0.615384615 24 1 1 37 3R:20620525-20620588 6 17.5 2926 FBgn0038815 41.00333333 1.706666667 2.616666667 0.42679457 10.25390625 6.687898089 1 0 0.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 20620700 20620707 + 3R_20620700_20620707_+ 0.561602224 0.520972321 0.541287272 0.028729678 CG5466 FBtr0083913|FBtr0083913|FBtr0083913 20620354|20620354|20620354 20621269|20621269|20621269 3R + 20620673 20620724 3'utr CG5466 FlyBase G44194.1 AAATTAGTTAAACAATTGGCAAAACGTCTGTGATATTTGAATTATGTTGGCA 162 20620699 0.870506695 8 154 1270 0.955665025 1.685741739 0.463054187 0.228395062 0.384236453 162 6 3 194 3R:20620673-20620724 8 CG5466 FBtr0083913|FBtr0083913|FBtr0083913 20620354|20620354|20620354 20621269|20621269|20621269 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 20620669 20620719 3'utr CG5466 FlyBase G33395.1 CGGCAAATTAGTTAAACAATTGGCAAAACGTCTGTGATATTTGAATTATGT 114 20620699 0.849975028 9 107 857 0.943037975 1.474216264 0.525316456 0.289473684 0.487341772 114 5 4 149 3R:20620669-20620719 8 136 2927 FBgn0038815 41.00333333 1.706666667 2.616666667 3.316803512 79.6875 51.97452229 1 1 1 0.15 dme-miR-14-3p 7mer-A1 AGACTGA 3R 20627229 20627235 + 3R_20627229_20627235_+ 0.823338868 0.823205186 0.823272027 9.45E-05 H FBtr0083914|FBtr0083916|FBtr0083917|FBtr0083915 20626787|20626787|20626787|20626787 20628915|20627251|20628915|20627251 3R + 20627212 20627251 3'utr H FlyBase G44217.1 AAACATTTCCTTGAAACAGACTGAACCTGAATTTTTTTAG 14 20627220 0.790730145 4 12 91 0.857142857 1.079181246 0.071428571 0 0 14 2 0 12 3R:20627212-20627251 7 H FBtr0083916|FBtr0083914|FBtr0083915|FBtr0083917 20626787|20626787|20626787|20626787 20627251|20628915|20627251|20628915 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 20627216 20627246 3'utr H FlyBase G33409.1 ATTTCCTTGAAACAGACTGAACCTGAATTTT 15 20627233 0.804078651 5 14 79 0.956521739 1.342422681 0.086956522 0.4 0.608695652 15 1 0 22 3R:20627216-20627246 7 14.5 2928 FBgn0001169 717.03 17.48666667 26.88666667 0.020222306 0.829203202 0.539300769 9 -4 2.5 0.15 dme-miR-12-5p 6mer3-8 AATACT 3R 20628857 20628862 + 3R_20628857_20628862_+ 0.927599042 0.930719768 0.929159405 0.002206739 H FBtr0083914|FBtr0083917 20626787|20626787 20628915|20628915 3R + 20628837 20628880 3'utr H FlyBase G44223.1 AGGTATATATACTGCAACTGAATACTTGATGTCAATAAAAACTT 9 20628862 0.960188034 3 9 59 1 1.041392685 0.090909091 0.222222222 0.363636364 9 0 0 11 3R:20628837-20628880 6 H FBtr0083914|FBtr0083917 20626787|20626787 20628915|20628915 AATACT 6mer3-8 dme-miR-12-5p 3R + 20628837 20628879 3'utr H FlyBase G33412.1 AGGTATATATACTGCAACTGAATACTTGATGTCAATAAAAACT 10 20628862 0.733194985 2 8 64 0.75 0.954242509 0 0.2 0.333333333 10 3 0 9 3R:20628837-20628879 6 9 2929 FBgn0001169 717.03 17.48666667 26.88666667 0.012551776 0.51467785 0.334738408 -5 -5 -5 0.15 dme-miR-317-5p 6mer3-8 GTATCC 3R 20629292 20629297 - 3R_20629292_20629297_- 0.999867887 0.999559241 0.999713564 0.000218284 Pi3K92E FBtr0083941|FBtr0083940|FBtr0334643 20628970|20628970|20628970 20629746|20629746|20629746 3R - 20629260 20629359 3'utr Pi3K92E FlyBase G52869.1 ATTCATTTGTTGTTTGAACACCCCCCCGCACATGCACATTGGCGCATGAACGTGCAAAAATTGTATCCTATTATGCTATATTAATTTAAGAGACATTAAC 92 20629298 0.986139433 13 90 754 0.983193277 2.068185862 0.529411765 0.260869565 0.428571429 92 2 0 117 3R:20629260-20629359 6 Pi3K92E FBtr0334643|FBtr0083940|FBtr0083941 20628970|20628970|20628970 20629746|20629746|20629746 GTATCC 6mer3-8 dme-miR-317-5p 3R - 20629268 20629346 3'utr Pi3K92E FlyBase G39914.1 TTGAACACCCCCCCGCACATGCACATTGGCGCATGAACGTGCAAAAATTGTATCCTATTATGCTATATTAATTTAAGAG 41 20629298 0.988292215 9 36 333 0.878787879 1.286306739 0.424242424 0.414634146 0.636363636 41 6 2 58 3R:20629268-20629346 6 57.5 2930 FBgn0015279 1152.983333 31.04666667 47.44333333 0.049870625 1.852050676 1.211972177 1 1 1 0.15 dme-miR-970-3p 6mer3-8 TCTTAT 3R 20629400 20629405 - 3R_20629400_20629405_- 0.999993029 0.999999917 0.999996473 4.88E-06 Pi3K92E FBtr0083941|FBtr0083940|FBtr0334643 20628970|20628970|20628970 20629746|20629746|20629746 3R - 20629364 20629413 3'utr Pi3K92E FlyBase G52870.1 CCGCCCCCTCTTATACAGTGATTTTTGATCCTAAAAATTGTTTTGTTGTC 7 20629400 0.990739511 4 7 74 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 3R:20629364-20629413 6 Pi3K92E FBtr0334643|FBtr0083940|FBtr0083941 20628970|20628970|20628970 20629746|20629746|20629746 TCTTAT 6mer3-8 dme-miR-970-3p 3R - 20629375 20629437 3'utr Pi3K92E FlyBase G39915.1 TTGTAACTGTAATCATTTATCGCCCCGCCCCCTCTTATACAGTGATTTTTGATCCTAAAAATT 9 20629390 0.983713444 6 8 69 1 1.041392685 0.272727273 0.222222222 0.363636364 9 0 0 11 3R:20629375-20629437 6 6 2931 FBgn0015279 1152.983333 31.04666667 47.44333333 0.005203891 0.193257462 0.126466662 -5 -15 -10 0.15 dme-bantam-3p 7mer-A1 GATCTCA 3R 20644139 20644145 + 3R_20644139_20644145_+ 0.823349527 0.82334949 0.823349508 0 Lrrk FBtr0334641|FBtr0334640|FBtr0112788 20644133|20644133|20644133 20644279|20644279|20644279 3R + 20644091 20644157 stop_codon Lrrk FlyBase G44228.1 ATCACATTCATTGCCTGCTGTGGCGCGCCAAGCACTGGACCTAAATTCGATCTCATTCAAAATATTT 52 20644136 0.698673896 10 50 359 0.966101695 1.755874856 0.084745763 0.115384615 0.220338983 52 2 0 57 3R:20644091-20644157 7 Lrrk FBtr0334641|FBtr0334640|FBtr0112788 20644133|20644133|20644133 20644279|20644279|20644279 GATCTCA 7mer-A1 dme-bantam-3p 3R + 20644093 20644170 stop_codon Lrrk FlyBase G33415.1 CACATTCATTGCCTGCTGTGGCGCGCCAAGCACTGGACCTAAATTCGATCTCATTCAAAATATTTGTTGACGTATTTA 45 20644136 0.981245242 7 44 317 0.984615385 1.806179974 0.015384615 0.355555556 0.553846154 45 1 0 64 3R:20644093-20644170 7 44.5 2932 FBgn0038816 197.3233333 3.033333333 4.62 0.225518185 14.67032967 9.632034632 3 3 3 0.15 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 20757447 20757454 - 3R_20757447_20757454_- 0.624089532 0.6286081 0.626348816 0.003195133 CG31195 FBtr0302188 20757267 20758623 3R - 20757249 20757605 3'utr CG31195 FlyBase G52894.1 TGTCCGCTTTTGGTTTTGTTTCTGGAAGTCTTGCCCCCCTGAACATTCCGCAATTTATTTGTAGATCAGTACAAAGCAATGAGAAGAAATCGAATGTGTAAATTGTGCCTTAAACTGAATATTTGTAACACAACAGACTATATCAAAAACATCCGTCCAATGAGTAGTCTACTTTGTATTATGTATCTACATATCTGAATTAGTGATAAGTGCCTTGAGACAAAATCGAATAACTTTTACAACCTGCTTGAGTAGTCTAATGTCTAGAATTTAAGTGTCTTATAATTTTAAAGCAATCCATCCATATATACAATGTTCAAATATATGATTTTGTAGTAAAAACCCCATTGACTTACC 206 20757445 0.981183262 56 192 1383 0.936170213 1.643452676 0.123404255 0.126213592 0.234042553 206 11 4 220 3R:20757249-20757605 8 CG31195 FBtr0302188 20757267 20758623 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R - 20757282 20757525 3'utr CG31195 FlyBase G39936.1 GAGAAGAAATCGAATGTGTAAATTGTGCCTTAAACTGAATATTTGTAACACAACAGACTATATCAAAAACATCCGTCCAATGAGTAGTCTACTTTGTATTATGTATCTACATATCTGAATTAGTGATAAGTGCCTTGAGACAAAATCGAATAACTTTTACAACCTGCTTGAGTAGTCTAATGTCTAGAATTTAAGTGTCTTATAATTTTAAAGCAATCCATCCATATATACAATGTTCAAATAT 161 20757445 0.978751233 42 146 1002 0.91025641 1.425289616 0.145299145 0.347826087 0.551282051 161 14 7 213 3R:20757282-20757525 8 67 2933 FBgn0051195 435.6633333 13.05 19.87666667 0.153788476 5.134099617 3.370786517 -9 -9 -9 0.15 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 20758586 20758593 - 3R_20758586_20758593_- 0.630594493 0.63059782 0.630596156 2.33E-06 CG31195 FBtr0302188 20757267 20758623 3R - 20758559 20758621 3'utr CG31195 FlyBase G52896.2 ACCGCACGCCAAATAACTAACGCAAACTTCCGTCCAAACAAAACTCACATCAAATCTCTCCAC 3573 20758594 0.791587169 7 3525 11201 0.986995516 2.301227357 0.010762332 0.192835153 0.353363229 3573 37 21 4402 3R:20758559-20758621 8 CG31195 FBtr0302188 20757267 20758623 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R - 20758559 20758621 3'utr CG31195 FlyBase G39937.1 ACCGCACGCCAAATAACTAACGCAAACTTCCGTCCAAACAAAACTCACATCAAATCTCTCCAC 2319 20758594 0.786185181 10 2292 6947 0.992256637 2.776701184 0.008573009 0.385942216 0.60619469 2319 23 5 3588 3R:20758559-20758621 8 2907 2934 FBgn0051195 435.6633333 13.05 19.87666667 6.67258357 222.7586207 146.2518866 1 1 1 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 3R 20807095 20807100 + 3R_20807095_20807100_+ 0.958476951 0.964044968 0.96126096 0.003937171 Syp FBtr0083961|FBtr0334713|FBtr0083963|FBtr0083959 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 3R + 20807011 20807119 3'utr Syp FlyBase G44262.1 AGATACATATTTGAAAGCACATATAGACAGACAGACGAGATCAGGCTCAGAGGCGCGTTGAAAAGCAAAGCTTAGTGAGGAACATTGACTGACAAAGTAAAAAGTAAAC 88 20807095 0.725088587 12 80 316 0.927927928 1.234685974 0.261261261 0.193181818 0.36036036 88 3 5 103 3R:20807011-20807119 6 Syp FBtr0083963|FBtr0083959|FBtr0083961|FBtr0334713 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 TTGACT 6mer3-8 dme-miR-1012-3p 3R + 20807019 20807122 3'utr Syp FlyBase G33444.1 ATTTGAAAGCACATATAGACAGACAGACGAGATCAGGCTCAGAGGCGCGTTGAAAAGCAAAGCTTAGTGAGGAACATTGACTGACAAAGTAAAAAGTAAACAAA 63 20807095 0.945780817 10 58 239 0.926315789 1.166331422 0.105263158 0.365079365 0.578947368 63 2 5 88 3R:20807019-20807122 6 69.5 2935 FBgn0038826 3810.263333 58.4 89.27 0.018240209 1.190068493 0.778537023 0 0 0 0.15 dme-bantam-3p 7mer-A1 GATCTCA 3R 20807973 20807979 + 3R_20807973_20807979_+ 0.823225198 0.823158456 0.823191827 4.72E-05 Syp FBtr0083961|FBtr0334713|FBtr0083963|FBtr0083959 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 3R + 20807925 20807993 3'utr Syp FlyBase G44267.1 TTGGTTGAAGACCGAAGAACCCTGTCGTTTACGTTTCCGCTATTGCTAGATCTCAAGTAAAGCAAAAAG 69 20807968 0.982791842 9 65 489 0.943181818 1.919078092 0.147727273 0.217391304 0.386363636 69 5 0 83 3R:20807925-20807993 7 Syp FBtr0083963|FBtr0083959|FBtr0083961|FBtr0334713 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 GATCTCA 7mer-A1 dme-bantam-3p 3R + 20807909 20807995 3'utr Syp FlyBase G33447.1 TCGACAACAAAATTGTTTGGTTGAAGACCGAAGAACCCTGTCGTTTACGTTTCCGCTATTGCTAGATCTCAAGTAAAGCAAAAAGTT 64 20807968 0.982620701 8 60 452 0.936842105 1.949390007 0.157894737 0.375 0.578947368 64 6 0 89 3R:20807909-20807995 7 64.5 2936 FBgn0038826 3810.263333 58.4 89.27 0.016927964 1.104452055 0.722527165 5 5 5 0.15 dme-miR-92b-3p 7mer-m1 TGCAATT 3R 20808650 20808656 + 3R_20808650_20808656_+ 0.754365258 0.748935692 0.751650475 0.003839307 Syp FBtr0083961|FBtr0334713|FBtr0083963|FBtr0083959 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 3R + 20808622 20808674 3'utr Syp FlyBase G44270.1 TTTTTTGAGAGAGAGCATTTCACGCAACTGCAATTGATTGTTGCCTTCGAAAA 16 20808662 0.703037512 6 14 115 0.909090909 1.301029996 0.136363636 0.3125 0.5 16 2 0 20 3R:20808622-20808674 7 Syp FBtr0083963|FBtr0083959|FBtr0083961|FBtr0334713 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 TGCAATT 7mer-m1 dme-miR-92b-3p 3R + 20808619 20808673 3'utr Syp FlyBase G33450.1 TTTTTTTTTGAGAGAGAGCATTTCACGCAACTGCAATTGATTGTTGCCTTCGAAA 10 20808640 0.720883064 7 10 73 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 3R:20808619-20808673 7 11 2937 FBgn0038826 3810.263333 58.4 89.27 0.00288694 0.188356164 0.123221687 -12 10 -1 0.15 dme-miR-986-5p 6mer3-8 ATTCGA 3R 20808912 20808917 + 3R_20808912_20808917_+ 0.602910092 0.767255749 0.68508292 0.116209888 Syp FBtr0083961|FBtr0334713|FBtr0083963|FBtr0083959 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 3R + 20808899 20808942 3'utr Syp FlyBase G44272.1 AACGATTTGTTTAATTCGATAACTGTACTGATTTTATATTGTTT 26 20808931 0.747317201 10 26 243 1 1.531478917 0.058823529 0.230769231 0.411764706 26 0 0 34 3R:20808899-20808942 6 Syp FBtr0083963|FBtr0083959|FBtr0083961|FBtr0334713 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 ATTCGA 6mer3-8 dme-miR-986-5p 3R + 20808910 20808977 3'utr Syp FlyBase G33451.1 TAATTCGATAACTGTACTGATTTTATATTGTTTTAAATTTGTAATTTAATTTGTAAGTTTTTATTGTT 31 20808931 0.685853445 11 28 329 0.893617021 1.62324929 0 0.35483871 0.574468085 31 5 0 42 3R:20808910-20808977 6 25 2938 FBgn0038826 3810.263333 58.4 89.27 0.006561226 0.428082192 0.280049289 -19 -19 -19 0.15 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 20809721 20809726 + 3R_20809721_20809726_+ 0.797908816 0.857880948 0.827894882 0.042406679 Syp FBtr0083961|FBtr0334713|FBtr0083963|FBtr0083959 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 3R + 20809664 20809803 3'utr Syp FlyBase G44279.1 AATTGCAAACTGCGCATGGAAACTGAGCGAAAAAAATGAAAAACTTTACATGAATTGTGATGATGCAAAGGCAAGATTTAATCATAATTACTAAATCTATATATACAGTAAATATATATATCTTTCTCTATAAATATATA 110 20809718 0.979907498 14 105 744 0.966216216 1.854306042 0.398648649 0.254545455 0.445945946 110 4 1 143 3R:20809664-20809803 6 Syp FBtr0083963|FBtr0083959|FBtr0083961|FBtr0334713 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R + 20809651 20809754 3'utr Syp FlyBase G33455.1 AAGGTGGACAAAAAATTGCAAACTGCGCATGGAAACTGAGCGAAAAAAATGAAAAACTTTACATGAATTGTGATGATGCAAAGGCAAGATTTAATCATAATTAC 77 20809718 0.880452781 16 71 522 0.925233645 1.393575203 0.448598131 0.298701299 0.495327103 77 5 3 99 3R:20809651-20809754 6 82 2939 FBgn0038826 3810.263333 58.4 89.27 0.021520822 1.404109589 0.918561667 3 3 3 0.15 dme-miR-14-3p 6mer2-7 AGACTG 3R 20809865 20809870 + 3R_20809865_20809870_+ 0.999964253 0.999992569 0.999978411 2.00E-05 Syp FBtr0083961|FBtr0334713|FBtr0083963|FBtr0083959 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 3R + 20809809 20809900 3'utr Syp FlyBase G44280.1 GAGTATATAATGTATATGTAGGCGTAGGAGTGTATAATCTAACTTTACTTTTAAACAGACTGCGTACGTATTAAAAATTTTTAAAATTAATT 53 20809858 0.740886318 15 51 411 0.942028986 1.511883361 0.115942029 0.188679245 0.376811594 53 3 1 65 3R:20809809-20809900 6 Syp FBtr0083963|FBtr0083959|FBtr0083961|FBtr0334713 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 AGACTG 6mer2-7 dme-miR-14-3p 3R + 20809819 20809887 3'utr Syp FlyBase G33456.1 TGTATATGTAGGCGTAGGAGTGTATAATCTAACTTTACTTTTAAACAGACTGCGTACGTATTAAAAATT 18 20809857 0.984098653 7 17 138 0.956521739 1.041392685 0.173913043 0.222222222 0.391304348 18 0 1 22 3R:20809819-20809887 6 27 2940 FBgn0038826 3810.263333 58.4 89.27 0.007086124 0.462328767 0.302453232 7 8 7.5 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 3R 20819758 20819764 - 3R_20819758_20819764_- 0.775244059 0.781424233 0.778334146 0.004369991 CG17271 FBtr0083993 20819624 20820192 3R - 20819752 20819819 3'utr CG17271 FlyBase G52914.1 AAGCGCGACTTTAGAGCAGCAAAAAAAACAGACTGATTGTGTAAACGTTTGTTTTGTACAAAAAGAAA 17 20819783 0.899680616 5 15 88 0.857142857 0.954242509 0.047619048 0.235294118 0.380952381 17 2 1 18 3R:20819752-20819819 7 CG17271 FBtr0083993 20819624 20820192 GTACAAA 7mer-A1 dme-miR-305-5p 3R - 20819749 20819795 3'utr CG17271 FlyBase G39947.1 AAAACAGACTGATTGTGTAAACGTTTGTTTTGTACAAAAAGAAAATG 7 20819767 0.97681865 5 7 48 1 1.176091259 0 0.285714286 0.666666667 7 0 0 15 3R:20819749-20819795 7 4 2941 FBgn0038829 298.4266667 26.90333333 40.93666667 0.013403628 0.148680461 0.097711913 19 3 11 0.15 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3R 20820025 20820031 - 3R_20820025_20820031_- 0.80878035 0.799769421 0.804274886 0.006371739 CG17271 FBtr0083993|FBtr0083993 20819624|20819624 20820192|20820192 3R - 20819987 20820050 3'utr CG17271 FlyBase G52917.1 GATAAATTTGAATGAAATTTACTTAACATGCTGCAAGCATTCCAATCGGAGAACTTCATTGAAC 13 20820033 0.980051835 5 13 93 1 1.230448921 0.647058824 0.230769231 0.411764706 13 0 0 17 3R:20819987-20820050 7 CG17271 FBtr0083993|FBtr0083993 20819624|20819624 20820192|20820192 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3R - 20820009 20820041 3'utr CG17271 FlyBase G39950.1 GAATGAAATTTACTTAACATGCTGCAAGCATTC 7 20820033 0.865739911 2 7 48 1 1 0.6 0.285714286 0.5 7 0 0 10 3R:20820009-20820041 7 9 2942 FBgn0038829 298.4266667 26.90333333 40.93666667 0.030158163 0.334531037 0.219851804 2 2 2 0.15 dme-miR-190-5p 6mer3-8 ACATAT 3R 20839536 20839541 + 3R_20839536_20839541_+ 0.997480858 0.999999497 0.998740177 0.001780919 Synd FBtr0083966|FBtr0334724|FBtr0334725 20839396|20839396|20839396 20839856|20840118|20840118 3R + 20839511 20839550 3'utr Synd FlyBase G44297.1 AGAGTCGTTGATGAAAAATTACCATACATATGTATTAGAA 6 20839539 0.979478684 4 6 38 1 1 0 0.5 0.7 6 0 0 10 3R:20839511-20839550 6 Synd FBtr0083966|FBtr0334724|FBtr0334725 20839396|20839396|20839396 20839856|20840118|20840118 ACATAT 6mer3-8 dme-miR-190-5p 3R + 20839524 20839576 3'utr Synd FlyBase G33472.1 AAAAATTACCATACATATGTATTAGAAATTGTTATGAGCAATCGCTTGCACTA 5 20839538 0.986221132 5 5 34 1 0.698970004 0.2 0 0 5 0 0 5 3R:20839524-20839576 6 4 2943 FBgn0053094 1119.136667 61.56 93.86 0.003574184 0.064977258 0.042616663 -3 -2 -2.5 0.15 dme-miR-980-3p 6mer2-7 GCAGCT 3R 20844802 20844807 + 3R_20844802_20844807_+ 0.907351911 0.950278215 0.928815063 0.030353478 CG15695 FBtr0083967 20844628 20844981 3R + 20844732 20844825 3'utr CG15695 FlyBase G44305.2 CTTATCACTGGGGTGGATCTGTGGCCGGATGGTTAGTTGCTGGCAACTACTACTTTTGGCAAACGTAATTGCAGCTCGGCAAATTGTGCGAATG 48 20844800 0.810380064 10 44 316 0.943396226 1.698970004 0.528301887 0.104166667 0.188679245 48 3 0 50 3R:20844732-20844825 6 CG15695 FBtr0083967 20844628 20844981 GCAGCT 6mer2-7 dme-miR-980-3p 3R + 20844763 20844825 3'utr CG15695 FlyBase G33480.1 GTTAGTTGCTGGCAACTACTACTTTTGGCAAACGTAATTGCAGCTCGGCAAATTGTGCGAATG 10 20844800 0.967341196 4 10 60 1 1.278753601 0.736842105 0.7 0.842105263 10 0 0 19 3R:20844763-20844825 6 23 2944 FBgn0038832 423.3333333 18.62 28.26333333 0.054330709 1.235230934 0.813775209 2 2 2 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3R 20929150 20929156 + 3R_20929150_20929156_+ 0.655890297 0.656827181 0.656358739 0.000662488 hdly FBtr0113257 20929000 20929213 3R + 20929131 20929179 3'utr hdly FlyBase G44316.1 TATTAAATAATAAATAACTTCTAGTCGGCTTTGCCAGTGGGGCTGGCCC 15 20929149 0.77883771 4 14 126 0.933333333 1.146128036 0.2 0 0 15 1 0 14 3R:20929131-20929179 7 hdly FBtr0113257 20929000 20929213 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 20929136 20929175 3'utr hdly FlyBase G33493.1 AATAATAAATAACTTCTAGTCGGCTTTGCCAGTGGGGCTG 10 20929149 0.975297769 2 10 80 1 1.041392685 0.272727273 0.1 0.181818182 10 0 0 11 3R:20929136-20929175 7 12.5 2945 FBgn0038842 553.6666667 45.08666667 69.06666667 0.022576761 0.277243827 0.180984556 1 1 1 0.15 dme-miR-34-5p 6mer2-7 ACTGCC 3R 20973696 20973701 + 3R_20973696_20973701_+ 0.945286544 0.9543625 0.949824522 0.006417701 Atpalpha FBtr0089512 20966747 20975284 3R + 20973678 20973728 3'utr Atpalpha FlyBase G44338.1 TGGCCGCGTTCCTCTCATACTGCCCGGGCATGGAGAAGGGTCTGCGCATGT 5 20973695 0.96780579 3 5 27 1 0.698970004 0.2 0 0 5 0 0 5 3R:20973678-20973728 6 Atpalpha FBtr0089512 20966747 20975284 ACTGCC 6mer2-7 dme-miR-34-5p 3R + 20973664 20973709 3'utr Atpalpha FlyBase G33510.1 CTTTGAAACCGTGCTGGCCGCGTTCCTCTCATACTGCCCGGGCATG 5 20973695 0.974998679 3 4 26 0.833333333 0.698970004 0.666666667 0.2 0.333333333 5 1 0 5 3R:20973664-20973709 6 4 2946 FBgn0002921 3927.986667 105.41 160.63 0.001018333 0.037947064 0.024901949 1 1 1 0.15 dme-miR-190-5p 6mer3-8 ACATAT 3R 20974168 20974173 + 3R_20974168_20974173_+ 0.994585902 0.889312976 0.941949439 0.074439181 Atpalpha FBtr0300191|FBtr0333324|FBtr0089513|FBtr0089511|FBtr0089510|FBtr0089512|FBtr0089509|FBtr0089514|FBtr0333325|FBtr0089515|FBtr0089516 20973930|20973930|20973930|20973930|20973930|20966747|20973930|20973930|20973930|20973930|20973930 20975284|20976239|20975284|20974337|20974337|20975284|20975284|20975284|20974337|20975284|20975284 3R + 20974132 20974187 3'utr Atpalpha FlyBase G44342.1 CAGCAACAGCTACGTCTACAACAAGCTACAGCAAGAACATATTACAATATATTTTA 27 20974173 0.886372744 8 19 124 0.657142857 1.06069784 0.028571429 0.259259259 0.428571429 27 11 1 23 3R:20974132-20974187 6 Atpalpha FBtr0089516|FBtr0089511|FBtr0089515|FBtr0333325|FBtr0089514|FBtr0089509|FBtr0089512|FBtr0089510|FBtr0089513|FBtr0333324|FBtr0300191 20973930|20973930|20973930|20973930|20973930|20973930|20966747|20973930|20973930|20973930|20973930 20975284|20974337|20975284|20974337|20975284|20975284|20975284|20974337|20975284|20976239|20975284 ACATAT 6mer3-8 dme-miR-190-5p 3R + 20974154 20974191 3'utr Atpalpha FlyBase G33513.1 AAGCTACAGCAAGAACATATTACAATATATTTTATTTT 14 20974174 0.624678223 4 11 71 0.807692308 1.322219295 0 0.571428571 0.769230769 14 5 0 21 3R:20974154-20974191 6 20 2947 FBgn0002921 3927.986667 105.41 160.63 0.005091667 0.189735319 0.124509743 -5 -6 -5.5 0.15 dme-miR-33-5p 7mer-A1 AATGCAA 3R 20974230 20974236 + 3R_20974230_20974236_+ 0.730002269 0.737416274 0.733709271 0.00524249 Atpalpha FBtr0300191|FBtr0333324|FBtr0089513|FBtr0089511|FBtr0089510|FBtr0089512|FBtr0089509|FBtr0089514|FBtr0333325|FBtr0089515|FBtr0089516 20973930|20973930|20973930|20973930|20973930|20966747|20973930|20973930|20973930|20973930|20973930 20975284|20976239|20975284|20974337|20974337|20975284|20975284|20975284|20974337|20975284|20975284 3R + 20974204 20974266 3'utr Atpalpha FlyBase G44343.1 ATTTAAAGTAAACGAGGATAAACAAAAATGCAAGCGATAATTATTTTAAACGTTAAGTAAATT 372 20974232 0.983984346 7 365 1425 0.98206278 2.340444115 0.044843049 0.161290323 0.30044843 372 7 1 438 3R:20974204-20974266 7 Atpalpha FBtr0089516|FBtr0089511|FBtr0089515|FBtr0333325|FBtr0089514|FBtr0089509|FBtr0089512|FBtr0089510|FBtr0089513|FBtr0333324|FBtr0300191 20973930|20973930|20973930|20973930|20973930|20973930|20966747|20973930|20973930|20973930|20973930 20975284|20974337|20975284|20974337|20975284|20975284|20975284|20974337|20975284|20976239|20975284 AATGCAA 7mer-A1 dme-miR-33-5p 3R + 20974204 20974262 3'utr Atpalpha FlyBase G33514.1 ATTTAAAGTAAACGAGGATAAACAAAAATGCAAGCGATAATTATTTTAAACGTTAAGTA 201 20974232 0.969971875 9 193 726 0.96742671 2.171726454 0.039087948 0.39800995 0.605863192 201 9 1 297 3R:20974204-20974262 7 282.5 2948 FBgn0002921 3927.986667 105.41 160.63 0.071919796 2.680011384 1.758700118 -2 -2 -2 0.15 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 21051692 21051698 - 3R_21051692_21051698_- 0.820176522 0.809340295 0.814758409 0.007662351 Mvl FBtr0301478|FBtr0089521|FBtr0330046|FBtr0301477 21051560|21051381|21051381|21051381 21052187|21052187|21052058|21052187 3R - 21051650 21051724 3'utr Mvl FlyBase G52955.1 AAATAGTTTAAAAGTCTAATAATAAGGCTGTGAAATTAACTGAGTGTAAATCGAACCACTTCAATTGTCTAATCG 75 21051703 0.986650727 8 62 532 0.84375 1.431363764 0.041666667 0.213333333 0.385416667 75 13 2 81 3R:21051650-21051724 7 Mvl FBtr0330046|FBtr0301477|FBtr0089521|FBtr0301478 21051381|21051381|21051381|21051560 21052058|21052187|21052187|21052187 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R - 21051679 21051724 3'utr Mvl FlyBase G39979.1 AAATAGTTTAAAAGTCTAATAATAAGGCTGTGAAATTAACTGAGTG 46 21051706 0.698837865 7 38 318 0.825396825 1.414973348 0 0.282608696 0.476190476 46 10 1 52 3R:21051679-21051724 7 59.5 2949 FBgn0011672 484.1233333 17.95 27.56 0.122902566 3.314763231 2.15892598 5 8 6.5 0.15 dme-miR-968-5p 7mer-A1 CTACTTA 3R 21051806 21051812 - 3R_21051806_21051812_- 0.47434734 0.564973093 0.519660217 0.064082118 Mvl FBtr0301478|FBtr0089521|FBtr0330046|FBtr0301477 21051560|21051381|21051381|21051381 21052187|21052187|21052058|21052187 3R - 21051788 21051883 3'utr Mvl FlyBase G52956.1 AGGACCTGGGATCAGTGTAACACAATAACTAAATTCTAATTGAAAAGCGTACCAAAAACGGTTCATAAACTCTACTTACTGAGAAGCGCGAAGAGA 15 21051808 0.952626043 7 15 62 1 1.255272505 0.166666667 0.2 0.333333333 15 0 0 18 3R:21051788-21051883 7 Mvl FBtr0330046|FBtr0301477|FBtr0089521|FBtr0301478 21051381|21051381|21051381|21051560 21052058|21052187|21052187|21052187 CTACTTA 7mer-A1 dme-miR-968-5p 3R - 21051770 21051849 3'utr Mvl FlyBase G39980.1 TCTAATTGAAAAGCGTACCAAAAACGGTTCATAAACTCTACTTACTGAGAAGCGCGAAGAGACAAAATAGAAAATCCATG 13 21051834 0.931637713 6 12 47 1 1.301029996 0.05 0.384615385 0.6 13 0 0 20 3R:21051770-21051849 7 6 2950 FBgn0011672 484.1233333 17.95 27.56 0.012393536 0.334261838 0.217706821 -4 22 9 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 3R 21054752 21054757 - 3R_21054752_21054757_- 0.99540655 0.984080019 0.989743285 0.008009116 Mvl FBtr0306350 21054646 21054959 3R - 21054740 21054782 5'utr Mvl FlyBase G52963.1 CGATGGGGTCCTATAGATTATAAGCTTGACTGTGGTAAGTCTT 13 21054750 0.896236523 4 12 117 0.923076923 0.77815125 0 0 0 13 0 1 12 3R:21054740-21054782 6 Mvl FBtr0306350 21054646 21054959 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 21054747 21054773 5'utr Mvl FlyBase G39985.1 CCTATAGATTATAAGCTTGACTGTGGT 8 21054750 0.808036018 2 7 59 0.928571429 1.113943352 0 0.25 0.571428571 8 1 0 13 3R:21054747-21054773 6 10 2951 FBgn0011672 484.1233333 17.95 27.56 0.020655893 0.557103064 0.362844702 -7 -7 -7 0.15 dme-miR-283-5p 8mer-A1 TGATATTA 3R 21054906 21054913 - 3R_21054906_21054913_- 0.548096874 0.549690121 0.548893497 0.001126563 Mvl FBtr0306350 21054646 21054959 3R - 21054857 21054933 5'utr Mvl FlyBase G52965.1 CACTCCCCCACACACCCTTGTGATATTAACACTAAATCACACGCTTAACACTACTAACACGTACCTAGTAGGGCTCT 10 21054916 0.964914364 4 9 53 0.9 0.954242509 0.1 0 0 10 1 0 9 3R:21054857-21054933 8 Mvl FBtr0306350 21054646 21054959 TGATATTA 8mer-A1 dme-miR-283-5p 3R - 21054904 21054935 5'utr Mvl FlyBase G39986.1 CACACTCCCCCACACACCCTTGTGATATTAAC 5 21054916 0.834775427 2 5 29 1 0.84509804 0 0.4 0.571428571 5 0 0 7 3R:21054904-21054935 8 4.5 2952 FBgn0011672 484.1233333 17.95 27.56 0.009295152 0.250696379 0.163280116 3 3 3 0.15 dme-miR-12-5p 6mer3-8 AATACT 3R 21062155 21062160 - 3R_21062155_21062160_- 0.993781522 0.999987103 0.996884312 0.004388022 Cortactin FBtr0306347|FBtr0306348|FBtr0306349|FBtr0084039 21061678|21061678|21061678|21061678 21062225|21062225|21062225|21062225 3R - 21062138 21062169 3'utr Cortactin FlyBase G52978.1 GAAAACGATAATACTGATGTTGGATTATAAAC 11 21062152 0.831483943 2 10 80 0.9375 0.875061263 0.3125 0.363636364 0.5625 11 0 1 15 3R:21062138-21062169 6 Cortactin FBtr0084039|FBtr0306349|FBtr0306348|FBtr0306347 21061678|21061678|21061678|21061678 21062225|21062225|21062225|21062225 AATACT 6mer3-8 dme-miR-12-5p 3R - 21062136 21062169 3'utr Cortactin FlyBase G39996.1 GAAAACGATAATACTGATGTTGGATTATAAACCA 6 21062152 0.891972235 2 6 43 1 1.079181246 0.25 0.666666667 0.833333333 6 0 0 12 3R:21062136-21062169 6 8.5 2953 FBgn0025865 2939.633333 150.03 230.9266667 0.002891517 0.056655336 0.036808222 -8 -8 -8 0.15 dme-miR-92b-3p 8mer-A1 GTGCAATA 3R 21070529 21070536 + 3R_21070529_21070536_+ 0.62891541 0.628915917 0.628915664 3.54E-07 AnxB9 FBtr0089517 21070330 21070539 3R + 21070499 21070552 3'utr-intron AnxB9 FlyBase G44364.1 AATCTACAAAACGCTTAGTATTTTCCCTCTGTGCAATAACGTCTAACGTTCAAC 58 21070522 0.966970556 9 55 499 0.974683544 1.58546073 0.17721519 0.293103448 0.481012658 58 1 1 77 3R:21070499-21070552 8 AnxB9 FBtr0089517 21070330 21070539 GTGCAATA 8mer-A1 dme-miR-92b-3p 3R + 21070508 21070550 3'utr-intron AnxB9 FlyBase G33526.1 AACGCTTAGTATTTTCCCTCTGTGCAATAACGTCTAACGTTCA 46 21070534 0.836817315 7 43 425 0.9375 1.77815125 0.234375 0.326086957 0.515625 46 4 0 60 3R:21070508-21070550 8 47.5 2954 FBgn0000083 3186.973333 280.66 427.6933333 0.014904423 0.169243925 0.111060885 7 -5 1 0.15 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3R 21110770 21110776 + 3R_21110770_21110776_+ 0.808599676 0.808684982 0.808642329 6.03E-05 rtet FBtr0084009|FBtr0084009 21110706|21110706 21110834|21110834 3R + 21110728 21110804 3'utr rtet FlyBase G44381.1 TTAAACTCACTAGAGATCAACGGAAGTATTAGCTGCACATTATACTTAATTTATCGTTTTTTACAAGTATTTTATAT 21 21110767 0.990413708 7 19 195 0.923076923 1.079181246 0.153846154 0.19047619 0.346153846 21 1 1 24 3R:21110728-21110804 7 rtet FBtr0084009|FBtr0084009 21110706|21110706 21110834|21110834 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3R + 21110729 21110802 3'utr rtet FlyBase G33536.1 TAAACTCACTAGAGATCAACGGAAGTATTAGCTGCACATTATACTTAATTTATCGTTTTTTACAAGTATTTTAT 23 21110767 0.981726444 10 22 193 0.944444444 1.531478917 0.083333333 0.391304348 0.611111111 23 2 0 34 3R:21110729-21110802 7 13.5 2955 FBgn0028468 207.3333333 14.48 21.91 0.06511254 0.932320442 0.616157006 3 3 3 0.15 dme-miR-999-3p 7mer-m8 AGTTAAC 3R 21115688 21115694 + 3R_21115688_21115694_+ 0.674512307 0.673934987 0.674223647 0.000408213 Rab11 FBtr0084011|FBtr0084010 21115383|21115383 21116146|21116146 3R + 21115658 21115717 3'utr Rab11 FlyBase G44387.1 AAAGAATCGAAAGCAACAACATCCGGCTGTAGTTAACTGCGGTTTAAACTGAAGTTTTAT 34 21115679 0.822651977 7 28 158 0.837209302 1.556302501 0.11627907 0.264705882 0.418604651 34 7 0 36 3R:21115658-21115717 7 Rab11 FBtr0084010|FBtr0084011 21115383|21115383 21116146|21116146 AGTTAAC 7mer-m8 dme-miR-999-3p 3R + 21115662 21115701 3'utr Rab11 FlyBase G33545.1 AATCGAAAGCAACAACATCCGGCTGTAGTTAACTGCGGTT 15 21115679 0.966826174 6 13 63 0.923076923 1.380211242 0.307692308 0.466666667 0.692307692 15 2 0 24 3R:21115662-21115701 7 24.5 2956 FBgn0015790 5922.233333 446.8466667 689.1166667 0.004136953 0.054828651 0.035552761 9 9 9 0.15 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 21115801 21115806 + 3R_21115801_21115806_+ 0.999997189 0.999999822 0.999998505 1.84E-06 Rab11 FBtr0084011|FBtr0084010 21115383|21115383 21116146|21116146 3R + 21115769 21115813 3'utr Rab11 FlyBase G44388.1 CAAGCAAAACTAAACACTCCAAATTCAGTTTAAGCTGTAGAACTA 8 21115793 0.884779434 6 8 46 1 1 0.2 0.25 0.4 8 0 0 10 3R:21115769-21115813 6 Rab11 FBtr0084010|FBtr0084011 21115383|21115383 21116146|21116146 AGCTGT 6mer3-8 dme-miR-1008-3p 3R + 21115723 21115814 3'utr Rab11 FlyBase G33546.1 TACAGATCCATGAGTATCGCATAAATCGACCGCCGCGGAAAGAAAGCAAGCAAAACTAAACACTCCAAATTCAGTTTAAGCTGTAGAACTAT 8 21115791 0.987906754 5 6 49 0.777777778 0.84509804 0 0.125 0.222222222 8 2 0 7 3R:21115723-21115814 6 5 2957 FBgn0015790 5922.233333 446.8466667 689.1166667 0.000844276 0.011189521 0.007255665 8 10 9 0.15 dme-miR-184-5p 6mer3-8 TGATAA 3R 21116033 21116038 + 3R_21116033_21116038_+ 0.999999725 0.999999981 0.999999853 2.12E-07 Rab11 FBtr0084011|FBtr0084010 21115383|21115383 21116146|21116146 3R + 21115987 21116043 3'utr Rab11 FlyBase G44390.1 GGTTTCTCGCAACATTTTAAACGATTGGCCACTTGGTAAAACTAGCTGATAAAGAGA 5 21116033 0.955132334 4 5 27 1 0.698970004 0.4 0 0 5 0 0 5 3R:21115987-21116043 6 Rab11 FBtr0084010|FBtr0084011 21115383|21115383 21116146|21116146 TGATAA 6mer3-8 dme-miR-184-5p 3R + 21116005 21116049 3'utr Rab11 FlyBase G33547.1 AAACGATTGGCCACTTGGTAAAACTAGCTGATAAAGAGAAATCAA 6 21116029 0.948312603 5 6 26 1 0.954242509 0.444444444 0.333333333 0.555555556 6 0 0 9 3R:21116005-21116049 6 4.5 2958 FBgn0015790 5922.233333 446.8466667 689.1166667 0.000759848 0.010070569 0.006530099 0 4 2 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3R 21116121 21116127 + 3R_21116121_21116127_+ 0.518444212 0.521223032 0.519833622 0.001964908 Rab11 FBtr0084011|FBtr0084010 21115383|21115383 21116146|21116146 3R + 21116088 21116146 3'utr Rab11 FlyBase G44391.1 CGAAATAACATCATTTGTGTTTGCTATGTTAAGTGTGATTAAATAAATATAATTTAAAT 13 21116128 0.904332942 8 11 119 0.8 1.079181246 0 0.153846154 0.266666667 13 3 0 12 3R:21116088-21116146 7 Rab11 FBtr0084010|FBtr0084011 21115383|21115383 21116146|21116146 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 21116092 21116131 3'utr Rab11 FlyBase G33548.1 ATAACATCATTTGTGTTTGCTATGTTAAGTGTGATTAAAT 6 21116129 0.989468937 5 5 48 0.818181818 0.954242509 0.181818182 0.666666667 0.818181818 6 2 0 9 3R:21116092-21116131 7 9 2959 FBgn0015790 5922.233333 446.8466667 689.1166667 0.001519697 0.020141137 0.013060198 -7 -8 -7.5 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 21119472 21119477 - 3R_21119472_21119477_- 0.956918622 0.960310274 0.958614448 0.002398294 slmb FBtr0330049|FBtr0084032 21119250|21119250 21120458|21120719 3R - 21119448 21119495 3'utr slmb FlyBase G53019.1 AAGTTCCAATGCTATACTTGATCTGGATCACGATCACGCCGCTTCCGC 59 21119478 0.728193433 5 55 444 0.93442623 1.153814864 0.163934426 0.033898305 0.06557377 59 1 3 57 3R:21119448-21119495 6 slmb FBtr0330049|FBtr0084032 21119250|21119250 21120458|21120719 TGATCT 6mer3-8 dme-bantam-3p 3R - 21119455 21119492 3'utr slmb FlyBase G40023.1 TTCCAATGCTATACTTGATCTGGATCACGATCACGCCG 21 21119478 0.740252078 2 17 160 0.878787879 0.860338007 0.333333333 0.428571429 0.636363636 21 1 3 29 3R:21119455-21119492 6 40 2960 FBgn0023423 1620.336667 64.75333333 99.38333333 0.024686228 0.617728817 0.402481972 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 21119535 21119540 - 3R_21119535_21119540_- 0.999794814 0.990899031 0.995346923 0.006290281 slmb FBtr0330049|FBtr0330049|FBtr0330049|FBtr0084032|FBtr0084032|FBtr0084032 21119250|21119250|21119250|21119250|21119250|21119250 21120458|21120458|21120458|21120719|21120719|21120719 3R - 21119527 21119559 3'utr slmb FlyBase G53020.1 ATGTATGCCGTTCGTTGATTGTGATCAATGGAT 8 21119542 0.716516843 5 8 66 1 0.954242509 0.333333333 0.125 0.222222222 8 0 0 9 3R:21119527-21119559 6 slmb FBtr0330049|FBtr0330049|FBtr0330049|FBtr0084032|FBtr0084032|FBtr0084032 21119250|21119250|21119250|21119250|21119250|21119250 21120458|21120458|21120458|21120719|21120719|21120719 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 21119496 21119551 3'utr slmb FlyBase G40024.1 CGTTCGTTGATTGTGATCAATGGATATTTTACTATGTGTATTGCTATTTGTAAGTT 6 21119540 0.990275944 5 6 67 1 0.954242509 0.111111111 0.5 0.666666667 6 0 0 9 3R:21119496-21119551 6 5.5 2961 FBgn0023423 1620.336667 64.75333333 99.38333333 0.003394356 0.084937712 0.055341271 2 0 1 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 21119642 21119647 - 3R_21119642_21119647_- 0.995081321 0.997029227 0.996055274 0.001377373 slmb FBtr0330049|FBtr0084032 21119250|21119250 21120458|21120719 3R - 21119579 21119692 3'utr slmb FlyBase G53021.1 AATGGATCCATTGTACTGCAATATATAACCGATTCTTTGATTGATTGATCTATGCTAACTATAGGTTTTAGATATACCGATGTATGTAGAAAATAGCAAATTCCCAGGCAATTT 65 21119648 0.989110557 16 63 594 0.973333333 1.86332286 0.386666667 0.123076923 0.24 65 2 0 73 3R:21119579-21119692 6 slmb FBtr0330049|FBtr0084032 21119250|21119250 21120458|21120719 TGATCT 6mer3-8 dme-bantam-3p 3R - 21119597 21119692 3'utr slmb FlyBase G40025.1 AATGGATCCATTGTACTGCAATATATAACCGATTCTTTGATTGATTGATCTATGCTAACTATAGGTTTTAGATATACCGATGTATGTAGAAAATAG 41 21119648 0.748865972 10 40 367 0.984126984 1.792391689 0.142857143 0.365853659 0.587301587 41 1 0 62 3R:21119597-21119692 6 34 2962 FBgn0023423 1620.336667 64.75333333 99.38333333 0.020983294 0.525069494 0.342109676 1 1 1 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 21120011 21120017 - 3R_21120011_21120017_- 0.658679233 0.658849853 0.658764543 0.000120703 slmb FBtr0330049|FBtr0084032 21119250|21119250 21120458|21120719 3R - 21119878 21120033 3'utr slmb FlyBase G53022.1 ACAAGTATCGCGTTTAGGCAGCTGCCGCCTCAAGAATCGCAGCAGGAATCTTCAGCGCGGCCAGAAGAATCAGTCTTTAGCATAAATGTTAGTTAGAGTTGCATCATTGAAATTGGCAGAGCGCGTTGCCGTTTTGCACATTTGTAACCTATTTTA 58 21120019 0.980102631 14 54 315 0.970149254 1.812913357 0.164179104 0.157894737 0.28358209 57 2 0 65 3R:21119878-21120033 7 slmb FBtr0330049|FBtr0084032 21119250|21119250 21120458|21120719 GGCAGCT 7mer-m8 dme-miR-980-3p 3R - 21119999 21120044 3'utr slmb FlyBase G40029.1 AGCTCAAATACACAAGTATCGCGTTTAGGCAGCTGCCGCCTCAAGA 28 21120020 0.686424971 6 27 152 0.961538462 1.698970004 0.269230769 0.535714286 0.75 28 2 0 50 3R:21119999-21120044 7 31 2963 FBgn0023423 1620.336667 64.75333333 99.38333333 0.019131827 0.478739833 0.311923528 2 3 2.5 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 21140199 21140204 + 3R_21140199_21140204_+ 0.962891203 0.974849839 0.968870521 0.008456007 meigo FBtr0084017|FBtr0113259 21140038|21140038 21140365|21140365 3R + 21140089 21140229 3'utr meigo FlyBase G44422.2 AGAAGACAATGCTTCCGGCTCGAGCGGCTGCAGCGCCAAAGTTTCCCCATTTCCTAGAACTGCTTATCGTACAAAGGATTCTAGCTATAGCGAACACAGCATTCGATACTTGATCTGCAACCCATAGACCGTCGTTTAAGT 380 21140199 0.976958796 20 357 2321 0.940919037 1.633468456 0.111597374 0.168421053 0.308533917 380 18 9 430 3R:21140089-21140229 6 meigo FBtr0113259|FBtr0084017 21140038|21140038 21140365|21140365 TGATCT 6mer3-8 dme-bantam-3p 3R + 21140089 21140228 3'utr meigo FlyBase G33560.1 AGAAGACAATGCTTCCGGCTCGAGCGGCTGCAGCGCCAAAGTTTCCCCATTTCCTAGAACTGCTTATCGTACAAAGGATTCTAGCTATAGCGAACACAGCATTCGATACTTGATCTGCAACCCATAGACCGTCGTTTAAG 234 21140199 0.80781479 25 217 1375 0.93982808 1.737722593 0.111747851 0.363247863 0.573065903 234 16 5 328 3R:21140089-21140228 6 267 2964 FBgn0250820 369.6666667 29.78 45.5 0.722272317 8.965748825 5.868131868 0 0 0 0.15 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 21140271 21140276 + 3R_21140271_21140276_+ 0.996496417 0.996458695 0.996477556 2.67E-05 meigo FBtr0084017|FBtr0113259 21140038|21140038 21140365|21140365 3R + 21140249 21140323 3'utr meigo FlyBase G44423.1 TATTAGAAAAGGAACAAATATTGTGCAAAAGTTTACACCAGACCTGCGGGTCTCTAACATACAGGATCATTCAAT 63 21140269 0.888460313 5 61 294 0.971428571 1.531478917 0.185714286 0.111111111 0.2 63 1 1 68 3R:21140249-21140323 6 meigo FBtr0113259|FBtr0084017 21140038|21140038 21140365|21140365 GTGCAA 6mer3-8 dme-miR-92b-3p 3R + 21140250 21140289 3'utr meigo FlyBase G33561.1 ATTAGAAAAGGAACAAATATTGTGCAAAAGTTTACACCAG 52 21140269 0.665891228 2 49 237 0.972222222 1.544068044 0.208333333 0.307692308 0.5 52 1 1 70 3R:21140250-21140289 6 53.5 2965 FBgn0250820 369.6666667 29.78 45.5 0.144724977 1.796507723 1.175824176 2 2 2 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 21159358 21159363 - 3R_21159358_21159363_- 0.730935366 0.73094924 0.730942303 9.76E-06 CG10824 FBtr0084028|FBtr0084028|FBtr0084028 21159236|21159236|21159236 21159389|21159389|21159389 3R - 21159320 21159375 3'utr CG10824 FlyBase G53041.1 GCCCATTTTTTATGTGATCACTACATTTTCAAAGCTTTACAATTATATGTATACAT 32 21159366 0.978663783 9 23 301 0.785714286 0.740362689 0.119047619 0.1875 0.380952381 32 4 5 33 3R:21159320-21159375 6 CG10824 FBtr0084028|FBtr0084028|FBtr0084028 21159236|21159236|21159236 21159389|21159389|21159389 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 21159332 21159375 3'utr CG10824 FlyBase G40046.1 GCCCATTTTTTATGTGATCACTACATTTTCAAAGCTTTACAATT 31 21159366 0.587900496 11 26 280 0.818181818 0.711204461 0.090909091 0.322580645 0.522727273 31 2 6 36 3R:21159332-21159375 6 28.5 2966 FBgn0038865 99.77666667 6.58 10.09 0.285637925 4.331306991 2.824578791 3 3 3 0.15 dme-miR-283-5p 6mer2-7 GATATT 3R 21213975 21213980 + 3R_21213975_21213980_+ 0.999506814 0.999863971 0.999685392 0.000252579 SNF4Agamma FBtr0301586|FBtr0301588 21212526|21212526 21214269|21214269 3R + 21213947 21214006 3'utr SNF4Agamma FlyBase G44457.1 ATTACTAGATTAAACAATGAGAAATTTGGATATTGAATTAATAATGGTAAAAGGCTTAAC 24 21213973 0.955261367 7 24 187 1 1.477121255 0 0.25 0.4 24 0 0 30 3R:21213947-21214006 6 SNF4Agamma FBtr0301588|FBtr0301586 21212526|21212526 21214269|21214269 GATATT 6mer2-7 dme-miR-283-5p 3R + 21213952 21213987 3'utr SNF4Agamma FlyBase G33590.1 TAGATTAAACAATGAGAAATTTGGATATTGAATTAA 21 21213973 0.862708028 5 21 164 1 1.462397998 0.034482759 0.285714286 0.482758621 21 0 0 29 3R:21213952-21213987 6 21.5 2967 FBgn0264357 1601.583333 44.32333333 67.41333333 0.013424216 0.485071821 0.318928006 2 2 2 0.15 dme-miR-988-3p 8mer-A1 ACAAGGGA 3R 21266220 21266227 - 3R_21266220_21266227_- 0.53933972 0.60777597 0.573557845 0.048391772 Rab1 FBtr0084104 21266027 21266947 3R - 21266193 21266279 3'utr Rab1 FlyBase G53063.1 AACATTTTTAGATTTAACGTCGAGCGATTGTGTGTTTGAATTATCGTGTGACACAAGGGATTTGTTTAGGCACATAATTAGTGTAAT 20 21266216 0.797704839 13 18 165 0.913043478 1.322219295 0.347826087 0.1 0.217391304 20 2 0 21 3R:21266193-21266279 8 Rab1 FBtr0084104 21266027 21266947 ACAAGGGA 8mer-A1 dme-miR-988-3p 3R - 21266208 21266273 3'utr Rab1 FlyBase G40066.1 TTTAGATTTAACGTCGAGCGATTGTGTGTTTGAATTATCGTGTGACACAAGGGATTTGTTTAGGCA 9 21266216 0.971630058 7 9 61 1 1.041392685 0.545454545 0.222222222 0.363636364 9 0 0 11 3R:21266208-21266273 8 8 2968 FBgn0016700 3065.546667 206.5566667 315.7 0.002609649 0.038730292 0.025340513 -11 -11 -11 0.15 dme-miR-1002-5p 7mer-m8 CTACTTA 3R 21266397 21266403 - 3R_21266397_21266403_- 0.537462696 0.577661986 0.557562341 0.028425198 Rab1 FBtr0084104 21266027 21266947 3R - 21266385 21266466 3'utr Rab1 FlyBase G53065.1 TAACTACACATTAATTGAGCGCAGGCGACGGCAGGAGCAATTGTACTTGTCCTGTGTCAGCTACTACTTACCACTATGTATA 21 21266399 0.965452715 7 21 127 1 1.361727836 0.347826087 0.095238095 0.173913043 21 0 0 23 3R:21266385-21266466 7 Rab1 FBtr0084104 21266027 21266947 CTACTTA 7mer-m8 dme-miR-1002-5p 3R - 21266372 21266454 3'utr Rab1 FlyBase G40068.1 AATTGAGCGCAGGCGACGGCAGGAGCAATTGTACTTGTCCTGTGTCAGCTACTACTTACCACTATGTATACATATGTATGTGT 11 21266399 0.963019567 7 10 58 0.928571429 0.812913357 0.428571429 0.181818182 0.357142857 11 0 1 13 3R:21266372-21266454 7 8 2969 FBgn0016700 3065.546667 206.5566667 315.7 0.002609649 0.038730292 0.025340513 -4 -4 -4 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 21271338 21271343 - 3R_21271338_21271343_- 0.73093614 0.730948954 0.730942547 9.12E-06 CG3308 FBtr0084102|FBtr0084102|FBtr0084102 21271076|21271076|21271076 21271954|21271954|21271954 3R - 21271323 21271391 3'utr CG3308 FlyBase G53081.1 TTCTTGTTGCGACGATGACGATGATGATGATGATTATGGGAAACGTAATGTGATCATTTTAAAAGCTAA 36 21271345 0.704356967 14 34 253 0.953488372 1.311753861 0.558139535 0.138888889 0.279069767 36 1 1 41 3R:21271323-21271391 6 CG3308 FBtr0084102|FBtr0084102|FBtr0084102 21271076|21271076|21271076 21271954|21271954|21271954 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 21271317 21271443 3'utr CG3308 FlyBase G40081.1 ACTTTTAGTTTGTGTCTCTGTTAGCCTGTAGTCGTACTTTTGTACATATTTATTCTTGTTGCGACGATGACGATGATGATGATGATTATGGGAAACGTAATGTGATCATTTTAAAAGCTAATTAGTT 37 21271335 0.988787621 16 34 342 0.903225806 1.748188027 0.483870968 0.486486486 0.693548387 37 6 0 56 3R:21271317-21271443 6 22 2970 FBgn0038877 892.1133333 50.83666667 77.60666667 0.024660544 0.432758508 0.283480801 2 -8 -3 0.15 dme-miR-980-3p 6mer2-7 GCAGCT 3R 21271485 21271490 - 3R_21271485_21271490_- 0.999999252 0.999986279 0.999992765 9.19E-06 CG3308 FBtr0084102 21271076 21271954 3R - 21271474 21271523 3'utr CG3308 FlyBase G53083.1 CTCCCGAAGCGATATATGTTAATGTTAAGTGCTGCAGCTTGTCTTTTGTT 16 21271482 0.967894432 10 15 143 0.95 0.977723605 0.05 0.25 0.4 16 0 1 19 3R:21271474-21271523 6 CG3308 FBtr0084102 21271076 21271954 GCAGCT 6mer2-7 dme-miR-980-3p 3R - 21271462 21271508 3'utr CG3308 FlyBase G40082.1 ATGTTAATGTTAAGTGCTGCAGCTTGTCTTTTGTTTGTTTCTTCTGT 23 21271482 0.90662099 8 23 237 1 1.531478917 0.294117647 0.260869565 0.5 23 0 0 34 3R:21271462-21271508 6 17.5 2971 FBgn0038877 892.1133333 50.83666667 77.60666667 0.019616342 0.344239722 0.225496091 -8 -8 -8 0.15 dme-miR-932-5p 6mer3-8 GGAATT 3R 21271650 21271655 - 3R_21271650_21271655_- 0.589249951 0.59086316 0.590056555 0.001140705 CG3308 FBtr0084102 21271076 21271954 3R - 21271571 21271680 3'utr CG3308 FlyBase G53084.1 TTGCAGGGTCTAGCTTTAAGTTGTTGGAATTTCCGAGCAATTGCTTTATTTACTCGAGTACCCAGAGAAACGGTGCCAAGGTGGTGCCTCGTGAACGTCGACTCCGGATT 16 21271640 0.986028902 11 15 123 0.947368421 1.255272505 0.052631579 0.0625 0.210526316 16 1 0 18 3R:21271571-21271680 6 CG3308 FBtr0084102 21271076 21271954 GGAATT 6mer3-8 dme-miR-932-5p 3R - 21271630 21271689 3'utr CG3308 FlyBase G40083.1 GATCGAAGTTTGCAGGGTCTAGCTTTAAGTTGTTGGAATTTCCGAGCAATTGCTTTATTT 9 21271650 0.759354835 5 8 79 0.833333333 1 0.333333333 0.333333333 0.5 9 2 0 10 3R:21271630-21271689 6 6 2972 FBgn0038877 892.1133333 50.83666667 77.60666667 0.006725603 0.118025048 0.077312946 -15 -5 -10 0.15 dme-miR-305-3p 7mer-m8 ATGTGCC 3R 21271836 21271842 - 3R_21271836_21271842_- 0.67451503 0.674515544 0.674515287 3.54E-07 CG3308 FBtr0084102 21271076 21271954 3R - 21271770 21272096 lincRNA_intron-lincRNA_exon CG3308 FlyBase G53085.1 CAGATATTGTACCTTCCAACGCAACGAGCCGTGCAGTTTGCCCGCCATTGTAGAGATGATAGCCGCCTTCATGAAGAAAAGCCCGGACGAGGTGGCTTTGGCCACTGCCTTTAATGCCCTGAAACTGTTTGGCTTGTCCTAGAAAATGGTAAAGGAGCCACATGGAACTGAACGACAAAGTGTGCCACCCAGCAGCTTTAAACCCGTAACTCTATAGATTCAACGAGCCTGAGATTCACGATAGACTCATACCTATGTGCCTTAACCACTAATCGAATTCAGGATGAAGCGCTTATCCTGATCCCCACACATACACACATCCACAAA 194 21271841 0.984368764 32 189 994 0.974137931 2.053078443 0.254310345 0.164948454 0.301724138 194 5 1 226 3R:21271770-21272096 7 CG3308 FBtr0084102 21271076 21271954 ATGTGCC 7mer-m8 dme-miR-305-3p 3R - 21271789 21271946 3'utr CG3308 FlyBase G40084.1 AAAGGAGCCACATGGAACTGAACGACAAAGTGTGCCACCCAGCAGCTTTAAACCCGTAACTCTATAGATTCAACGAGCCTGAGATTCACGATAGACTCATACCTATGTGCCTTAACCACTAATCGAATTCAGGATGAAGCGCTTATCCTGATCCCCAC 121 21271841 0.981685715 13 116 574 0.938888889 1.625826713 0.261111111 0.363636364 0.572222222 121 8 3 169 3R:21271789-21271946 7 65.5 2973 FBgn0038877 892.1133333 50.83666667 77.60666667 0.073421165 1.288440102 0.843999656 -1 -1 -1 0.15 dme-miR-14-3p 6mer3-8 AAGACT 3R 21320908 21320913 - 3R_21320908_21320913_- 0.974912416 0.967826038 0.971369227 0.005010841 CG16791 FBtr0343807|FBtr0343805|FBtr0084095|FBtr0343806 21318298|21320758|21318298|21320758 21321053|21321053|21321053|21321053 3R - 21320877 21320990 3'utr CG16791 FlyBase G53092.1 AAAGCGCTACGTATACATCACTAATTCCCCGAAACCAAATCCCATTATGATCATCGACATGTATACAAGACACATCTAAGACTTATTGTATATTTCGTGTAGTATGTGTAAGGC 162 21320905 0.976922097 11 154 1008 0.964102564 1.797036595 0.071794872 0.166666667 0.307692308 162 5 2 188 3R:21320877-21320990 6 CG16791 FBtr0343806|FBtr0084095|FBtr0343805|FBtr0343807 21320758|21318298|21320758|21318298 21321053|21321053|21321053|21321053 AAGACT 6mer3-8 dme-miR-14-3p 3R - 21320881 21320962 3'utr CG16791 FlyBase G40094.1 CCGAAACCAAATCCCATTATGATCATCGACATGTATACAAGACACATCTAAGACTTATTGTATATTTCGTGTAGTATGTGTA 121 21320905 0.752327661 8 111 726 0.924324324 1.931966115 0.081081081 0.380165289 0.594594595 121 13 1 171 3R:21320881-21320962 6 107.5 2974 FBgn0038881 628.8366667 15.01 23.02333333 0.170950591 7.161892072 4.669176198 -8 -8 -8 0.15 dme-miR-317-3p 6mer2-7 GTGTTC 3R 21361863 21361868 + 3R_21361863_21361868_+ 0.999816125 0.999715186 0.999765655 7.13E-05 pre-mod(mdg4)-Z FBtr0303402 21361829 21362131 3R + 21361839 21361882 3'utr pre-mod(mdg4)-Z FlyBase G44529.1 TATACATTCCCAACCCAAACGTTCGTGTTCTGTTAGGGCTAAGC 8 21361869 0.983086829 3 8 63 1 0.954242509 0 0.125 0.222222222 8 0 0 9 3R:21361839-21361882 6 pre-mod(mdg4)-Z FBtr0303402 21361829 21362131 GTGTTC 6mer2-7 dme-miR-317-3p 3R + 21361843 21361883 3'utr pre-mod(mdg4)-Z FlyBase G33639.1 CATTCCCAACCCAAACGTTCGTGTTCTGTTAGGGCTAAGCT 8 21361869 0.654697288 2 8 70 1 1.041392685 0.181818182 0.25 0.454545455 8 0 0 11 3R:21361843-21361883 6 8 2975 FBgn0261838 149.3333333 9.943333333 15.14333333 0.053571429 0.804559169 0.528285274 -6 -6 -6 0.15 dme-miR-14-3p 7mer-A1 AGACTGA 3R 21361925 21361931 + 3R_21361925_21361931_+ 0.823245717 0.823307685 0.823276701 4.38E-05 pre-mod(mdg4)-Z FBtr0303402 21361829 21362131 3R + 21361905 21361993 3'utr pre-mod(mdg4)-Z FlyBase G44530.1 TGAGCGTATATCATTGATTTAGACTGAGTGTCCCGAGCCTAGTTAGGATGGGTAAGTAGCCTGTTCATCTGGGATCTCAAAGTACCATT 96 21361923 0.888712736 17 88 710 0.923076923 1.73239376 0.247863248 0.166666667 0.316239316 96 8 1 108 3R:21361905-21361993 7 pre-mod(mdg4)-Z FBtr0303402 21361829 21362131 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 21361902 21361987 3'utr pre-mod(mdg4)-Z FlyBase G33640.1 TCTTGAGCGTATATCATTGATTTAGACTGAGTGTCCCGAGCCTAGTTAGGATGGGTAAGTAGCCTGTTCATCTGGGATCTCAAAGT 65 21361923 0.791859326 10 62 475 0.927083333 1.347330015 0.364583333 0.323076923 0.541666667 65 4 3 89 3R:21361902-21361987 7 65.5 2976 FBgn0261838 149.3333333 9.943333333 15.14333333 0.438616071 6.587328193 4.325335681 2 2 2 0.15 dme-miR-965-3p 6mer2-7 ACGCTT 3R 21362048 21362053 + 3R_21362048_21362053_+ 0.9989871 0.809048941 0.90401802 0.134306589 pre-mod(mdg4)-Z FBtr0303402 21361829 21362131 3R + 21361994 21362127 3'utr pre-mod(mdg4)-Z FlyBase G44531.1 TTTGTAATTCTTAAAGTCCCGGGTCATATTATTTATTCTGTTCTCATTGCTTAGACGCTTTTGGCCACGGCACTGACTTAAACAATGGCTTGTGTTACGTACAAAATATGAACTCTTAATAAAATCAGATGAAC 47 21362054 0.98641442 12 44 376 0.944444444 1.707570176 0.148148148 0.14893617 0.259259259 47 3 0 51 3R:21361994-21362127 6 pre-mod(mdg4)-Z FBtr0303402 21361829 21362131 ACGCTT 6mer2-7 dme-miR-965-3p 3R + 21361999 21362100 3'utr pre-mod(mdg4)-Z FlyBase G33641.1 AATTCTTAAAGTCCCGGGTCATATTATTTATTCTGTTCTCATTGCTTAGACGCTTTTGGCCACGGCACTGACTTAAACAATGGCTTGTGTTACGTACAAAAT 29 21362054 0.904392592 11 26 212 0.918918919 1.531478917 0.135135135 0.24137931 0.405405405 29 3 0 34 3R:21361999-21362100 6 20.5 2977 FBgn0261838 149.3333333 9.943333333 15.14333333 0.137276786 2.06168287 1.353731015 -6 -6 -6 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 21363205 21363210 - 3R_21363205_21363210_- 0.553583843 0.77867866 0.666131252 0.15916613 pre-mod(mdg4)-E FBtr0343748|FBtr0343749 21362966|21362966 21363279|21363279 3R - 21363179 21363232 3'utr pre-mod(mdg4)-E FlyBase G53111.1 TGAACTAATGTCGATGTAGAGTGTACCTAAGGTGAGCGATTTTTAGCGGGCAGC 46 21363211 0.830108965 2 45 293 0.980769231 1.707570176 0.288461538 0.130434783 0.230769231 46 1 0 51 3R:21363179-21363232 6 pre-mod(mdg4)-E FBtr0343749|FBtr0343748 21362966|21362966 21363279|21363279 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 21363191 21363235 3'utr pre-mod(mdg4)-E FlyBase G40110.1 TGTTGAACTAATGTCGATGTAGAGTGTACCTAAGGTGAGCGATTT 40 21363211 0.8181754 4 37 225 0.876923077 1.755874856 0.276923077 0.425 0.646153846 40 8 0 57 3R:21363191-21363235 6 41.5 2978 FBgn0266172 87.15333333 4.996666667 7.713333333 0.476172263 8.305537025 5.380293863 1 1 1 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 21363255 21363260 - 3R_21363255_21363260_- 0.93336016 0.770222867 0.851791514 0.115355491 pre-mod(mdg4)-E FBtr0343748|FBtr0343749 21362966|21362966 21363279|21363279 3R - 21363243 21363268 3'utr pre-mod(mdg4)-E FlyBase G53112.1 GTGGGCTCACCAAAATCTGTGGTTTT 7 21363253 0.827501698 3 7 53 1 0.954242509 0.777777778 0.142857143 0.333333333 7 0 0 9 3R:21363243-21363268 6 pre-mod(mdg4)-E FBtr0343749|FBtr0343748 21362966|21362966 21363279|21363279 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 21363243 21363273 3'utr pre-mod(mdg4)-E FlyBase G40111.1 CGGTTGTGGGCTCACCAAAATCTGTGGTTTT 10 21363253 0.869280638 3 9 83 0.923076923 0.77815125 0.461538462 0.3 0.461538462 10 0 1 12 3R:21363243-21363273 6 8.5 2979 FBgn0266172 87.15333333 4.996666667 7.713333333 0.097529259 1.701134089 1.1019879 -7 -7 -7 0.15 dme-miR-92b-3p 7mer-m8 GTGCAAT 3R 21371605 21371611 - 3R_21371605_21371611_- 0.390953028 0.658807996 0.524880512 0.189402087 pre-mod(mdg4)-O FBtr0347107 21370916 21371636 3R - 21371539 21371635 5'utr pre-mod(mdg4)-O FlyBase G53120.1 TTGGCTATCCAACTGGTCTTGGCAGTGCAATGTAGTTACTAAGTAACAGCTATTAAAAGTACATATCTAGGAAATGGACTATGTACACTTATTTTCG 19 21371616 0.97227807 9 19 139 1 1.431363764 0.185185185 0.210526316 0.444444444 19 0 0 27 3R:21371539-21371635 7 pre-mod(mdg4)-O FBtr0347107 21370916 21371636 GTGCAAT 7mer-m8 dme-miR-92b-3p 3R - 21371586 21371630 5'utr pre-mod(mdg4)-O FlyBase G40118.1 TATCCAACTGGTCTTGGCAGTGCAATGTAGTTACTAAGTAACAGC 8 21371616 0.733652102 4 8 50 1 1.041392685 0.181818182 0.25 0.454545455 8 0 0 11 3R:21371586-21371630 7 9 2980 FBgn0267651 33.88666667 1.706666667 2.616666667 0.265591186 5.2734375 3.439490446 5 5 5 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 3R 21527137 21527143 + 3R_21527137_21527143_+ 0.78090774 0.78287343 0.781890585 0.00138996 CG7956 FBtr0334664 21526920 21527691 3R + 21527097 21527147 3'utr CG7956 FlyBase G44556.1 TTATCTTTACAATAAATACCTAAGACTAGCATGTATTATTGTACAAAAAAA 8 21527135 0.974888575 3 8 56 1 0.954242509 0 0.125 0.222222222 8 0 0 9 3R:21527097-21527147 7 CG7956 FBtr0334664 21526920 21527691 GTACAAA 7mer-A1 dme-miR-305-5p 3R + 21527109 21527147 3'utr CG7956 FlyBase G33659.1 TAAATACCTAAGACTAGCATGTATTATTGTACAAAAAAA 5 21527133 0.98405328 5 5 33 1 0.698970004 0 0 0 5 0 0 5 3R:21527109-21527147 7 4.5 2981 FBgn0038890 1061.573333 33.39 51.31 0.004238991 0.134770889 0.087702202 2 4 3 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3R 21527808 21527814 + 3R_21527808_21527814_+ 0.521223848 0.521220316 0.521222082 2.47E-06 CG7956 FBtr0301211 21527595 21528598 3R + 21527782 21527836 3'utr CG7956 FlyBase G44558.1 ATAATGTAGTTGATATACGCCATATTTGTGATTGTTATAGCACCAAGCTGTAGTG 48 21527814 0.590203976 7 46 452 0.981818182 1.431363764 0.072727273 0.125 0.236363636 48 0 1 54 3R:21527782-21527836 7 CG7956 FBtr0301211 21527595 21528598 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 21527793 21527858 3'utr CG7956 FlyBase G33660.1 GATATACGCCATATTTGTGATTGTTATAGCACCAAGCTGTAGTGAGTTTATAGATTTTTGGGCAAC 25 21527814 0.988218921 6 24 217 0.977777778 1.643452676 0.044444444 0.56 0.755555556 25 1 0 44 3R:21527793-21527858 7 34 2982 FBgn0038890 1061.573333 33.39 51.31 0.032027933 1.018268943 0.662638862 -6 -6 -6 0.15 dme-miR-999-3p 6mer3-8 AGTTAA 3R 21570269 21570274 - 3R_21570269_21570274_- 0.913419218 0.999793592 0.956606405 0.061075924 InR FBtr0084121|FBtr0290232|FBtr0290230|FBtr0290231 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 3R - 21570242 21570298 3'utr InR FlyBase G53137.1 AAGCTAATTGTAAAAGTAATGCTAAGTTAATTGTTTCCTGTTTGTTTAAGCAAAAAA 6 21570267 0.989288599 3 5 56 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3R:21570242-21570298 6 InR FBtr0290230|FBtr0290231|FBtr0084121|FBtr0290232 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 AGTTAA 6mer3-8 dme-miR-999-3p 3R - 21570248 21570284 3'utr InR FlyBase G40134.1 AGTAATGCTAAGTTAATTGTTTCCTGTTTGTTTAAGC 6 21570268 0.720581899 3 6 62 1 1.041392685 0.272727273 0.333333333 0.636363636 6 0 0 11 3R:21570248-21570284 6 5.5 2983 FBgn0013984 3333.303333 37.67666667 58.15666667 0.001650015 0.145978944 0.094572133 -7 -6 -6.5 0.15 dme-miR-276a-3p 7mer-m8 AGTTCCT 3R 21570773 21570779 - 3R_21570773_21570779_- 0.42619667 0.504676061 0.465436365 0.055493316 InR FBtr0084121|FBtr0290232|FBtr0290230|FBtr0290231 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 3R - 21570714 21570921 3'utr InR FlyBase G53139.2 ATTAATTTAACAATGTAATACGCTATATGCATAACGAAACAATAGATATTCTACACAAACACACATGCACACAGACACCCACACACCCATACACACATTTACATATATTACACACATACACACTAAAAAGACTGAAAGATATAGTTCCTTTTGTTTTTATGTACATAAAAAAATGTGAAAAGAAAAAAGAGAAATTCTAACGAAAATC 303 21570805 0.999945463 24 268 1646 0.883333333 1.461034435 0.111111111 0.138613861 0.275 303 32 10 318 3R:21570714-21570921 7 InR FBtr0290230|FBtr0290231|FBtr0084121|FBtr0290232 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 AGTTCCT 7mer-m8 dme-miR-276a-3p 3R - 21570728 21570817 3'utr InR FlyBase G40139.1 ATATTACACACATACACACTAAAAAGACTGAAAGATATAGTTCCTTTTGTTTTTATGTACATAAAAAAATGTGAAAAGAAAAAAGAGAAA 239 21570772 0.975740556 16 211 1338 0.872881356 1.410777233 0.076271186 0.372384937 0.576271186 239 34 11 309 3R:21570728-21570817 7 125 2984 FBgn0013984 3333.303333 37.67666667 58.15666667 0.037500338 3.317703265 2.149366653 26 -7 9.5 0.15 dme-miR-283-5p 7mer-m1 GATATTT 3R 21571009 21571015 - 3R_21571009_21571015_- 0.615890056 0.738773266 0.677331661 0.086891544 InR FBtr0084121|FBtr0290232|FBtr0290230|FBtr0290231 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 3R - 21570991 21571053 3'utr InR FlyBase G53140.1 ACTAGTGCTAATTATATAAACAAAACTGGGAAGCAAGCGATATTTACACTGAAAACTGAAGTA 34 21571011 0.85967824 9 31 168 0.868421053 1.217483944 0.105263158 0.088235294 0.184210526 34 4 1 33 3R:21570991-21571053 7 InR FBtr0290230|FBtr0290231|FBtr0084121|FBtr0290232 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 GATATTT 7mer-m1 dme-miR-283-5p 3R - 21570976 21571059 3'utr InR FlyBase G40141.1 AAAACAACTAGTGCTAATTATATAAACAAAACTGGGAAGCAAGCGATATTTACACTGAAAACTGAAGTAAAAACTACTAAAAAA 39 21571011 0.954712214 8 37 171 0.927272727 1.707570176 0.072727273 0.282051282 0.490909091 39 4 0 51 3R:21570976-21571059 7 32 2985 FBgn0013984 3333.303333 37.67666667 58.15666667 0.009600086 0.849332036 0.550237863 -4 -4 -4 0.15 dme-miR-2a-2-5p 6mer2-7 GATGAG 3R 21571114 21571119 - 3R_21571114_21571119_- 0.740864967 0.944728368 0.842796667 0.144153193 InR FBtr0084121|FBtr0290232|FBtr0290230|FBtr0290231 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 3R - 21571082 21571219 3'utr InR FlyBase G53141.1 TTGTTTTTATTTTATAGATGCAAAGCGAAAACAAGGAAACTAAATATTTAAATGAATTATACAAATTACTTAGATTGTAGTCAGATAGTAAGGAGAAGACGATGAGTCGAGAGATAGGTAGGAATCCTTGAACTAATT 34 21571117 0.930428465 13 28 165 0.785714286 1.041392685 0.261904762 0.176470588 0.333333333 34 7 2 33 3R:21571082-21571219 6 InR FBtr0290230|FBtr0290231|FBtr0084121|FBtr0290232 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 GATGAG 6mer2-7 dme-miR-2a-2-5p 3R - 21571085 21571238 3'utr InR FlyBase G40142.1 CACGCATGTGCTAGGTCTTTTGTTTTTATTTTATAGATGCAAAGCGAAAACAAGGAAACTAAATATTTAAATGAATTATACAAATTACTTAGATTGTAGTCAGATAGTAAGGAGAAGACGATGAGTCGAGAGATAGGTAGGAATCCTTGAACTA 25 21571117 0.974337027 18 23 147 0.933333333 1.447158031 0.233333333 0.16 0.3 25 2 0 28 3R:21571085-21571238 6 11 2986 FBgn0013984 3333.303333 37.67666667 58.15666667 0.00330003 0.291957887 0.189144265 -2 -2 -2 0.15 dme-miR-1012-3p 7mer-A1 TGACTAA 3R 21571281 21571287 - 3R_21571281_21571287_- 0.762858555 0.756451038 0.759654797 0.004530857 InR FBtr0084121|FBtr0290232|FBtr0290230|FBtr0290231 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 3R - 21571257 21571362 3'utr InR FlyBase G53142.1 ACAACAAAAGTATTCGATATTTGCCTTCGCTCTTTATATTATTATATATTTAACTATACAAACACATATATTTAATGACTAAATGAAAGCAAAGCAAAGCAAAGAA 53 21571279 0.979477025 7 51 209 0.970588235 1.51851394 0.014705882 0.20754717 0.382352941 53 1 1 66 3R:21571257-21571362 7 InR FBtr0290230|FBtr0290231|FBtr0084121|FBtr0290232 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 TGACTAA 7mer-A1 dme-miR-1012-3p 3R - 21571259 21571304 3'utr InR FlyBase G40143.1 CAAACACATATATTTAATGACTAAATGAAAGCAAAGCAAAGCAAAG 33 21571279 0.969058928 3 31 111 0.948717949 1.091080469 0.025641026 0.181818182 0.307692308 33 0 2 37 3R:21571259-21571304 7 39.5 2987 FBgn0013984 3333.303333 37.67666667 58.15666667 0.011850107 1.048394232 0.679199862 -8 -8 -8 0.15 dme-miR-7-5p 6mer3-8 GTCTTC 3R 21572393 21572398 - 3R_21572393_21572398_- 0.999985678 0.999912639 0.999949158 5.17E-05 InR FBtr0084121|FBtr0290232|FBtr0290230|FBtr0290231 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 3R - 21572317 21572416 3'utr InR FlyBase G53148.1 AAAAACAAAACAGCAACTGTCTTCACTGAGTTAGCTAGCAATAGTTATAATTATCCAAACACCCGAACTACACGTAACTAGGTTTAAATGTTATTCAGCT 39 21572398 0.973760682 14 35 214 0.884615385 1.662757832 0 0.230769231 0.423076923 39 6 0 46 3R:21572317-21572416 6 InR FBtr0290230|FBtr0290231|FBtr0084121|FBtr0290232 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 GTCTTC 6mer3-8 dme-miR-7-5p 3R - 21572336 21572453 3'utr InR FlyBase G40151.1 GAAATAGATGAACTCTACAACAGCAAACAAGCAATACAAAAACAAAACAGCAACTGTCTTCACTGAGTTAGCTAGCAATAGTTATAATTATCCAAACACCCGAACTACACGTAACTAG 25 21572399 0.981590083 10 19 139 0.714285714 1.397940009 0.171428571 0.32 0.514285714 25 10 0 25 3R:21572336-21572453 6 18 2988 FBgn0013984 3333.303333 37.67666667 58.15666667 0.005400049 0.47774927 0.309508798 0 1 0.5 0.15 dme-miR-8-3p 6mer2-7 AGTATT 3R 21572798 21572803 - 3R_21572798_21572803_- 0.956844894 0.999957194 0.978401044 0.030485 InR FBtr0084121|FBtr0290232|FBtr0290230|FBtr0290231 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 3R - 21572786 21572821 3'utr InR FlyBase G53151.1 ATGTTTACGTATTCGTTTAGTATTTACTCTACATTT 6 21572799 0.907974838 3 4 58 0.777777778 0.84509804 0.222222222 0.5 0.666666667 6 2 0 7 3R:21572786-21572821 6 InR FBtr0290230|FBtr0290231|FBtr0084121|FBtr0290232 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 AGTATT 6mer2-7 dme-miR-8-3p 3R - 21572757 21572850 3'utr InR FlyBase G40155.1 AATACCAATAGTTTCGATTAAGCCTATTTATGTTTACGTATTCGTTTAGTATTTACTCTACATTTTTTGTTTGTTTAAATTAATGCACTAGAGC 8 21572806 0.992650458 6 7 79 0.928571429 1.113943352 0 0.375 0.642857143 8 1 0 13 3R:21572757-21572850 6 4 2989 FBgn0013984 3333.303333 37.67666667 58.15666667 0.001200011 0.106166504 0.068779733 -4 3 -0.5 0.15 dme-miR-965-3p 7mer-A1 ACGCTTA 3R 21786170 21786176 - 3R_21786170_21786176_- 0.795665492 0.812818825 0.804242158 0.012129215 CASK FBtr0084162|FBtr0112873|FBtr0301327|FBtr0301328|FBtr0084161|FBtr0330368|FBtr0112872 21785760|21785760|21783398|21785760|21785760|21785760|21785760 21786682|21786682|21786682|21786682|21786682|21786589|21786682 3R - 21786109 21786210 3'utr CASK FlyBase G53257.1 TGTTTTATTCAGCATTTAGTCAAAACAGCATTAAACGCTTATGTAAATCTTGCACTTGTTAGTGTCTAAGTTAAATGGAGTTAGACAAATCGAAACTGAAGC 37 21786153 0.987016403 15 35 297 0.955555556 1.633468456 0.111111111 0.216216216 0.355555556 37 2 0 43 3R:21786109-21786210 7 CASK FBtr0301328|FBtr0084161|FBtr0330368|FBtr0112872|FBtr0084162|FBtr0112873|FBtr0301327 21785760|21785760|21785760|21785760|21785760|21785760|21783398 21786682|21786682|21786589|21786682|21786682|21786682|21786682 ACGCTTA 7mer-A1 dme-miR-965-3p 3R - 21786125 21786226 3'utr CASK FlyBase G40239.1 ATTGTTTTGTTGTATTTGTTTTATTCAGCATTTAGTCAAAACAGCATTAAACGCTTATGTAAATCTTGCACTTGTTAGTGTCTAAGTTAAATGGAGTTAGAC 24 21786179 0.984813899 14 23 189 0.96875 1.491361694 0.0625 0.291666667 0.46875 24 1 0 31 3R:21786125-21786226 7 16 2990 FBgn0013759 1781.206667 49.49333333 75.88666667 0.008982675 0.323275862 0.210840727 -23 3 -10 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 3R 21786240 21786245 - 3R_21786240_21786245_- 0.963018048 0.939427591 0.951222819 0.016680932 CASK FBtr0084162|FBtr0112873|FBtr0301327|FBtr0301328|FBtr0084161|FBtr0330368|FBtr0112872 21785760|21785760|21783398|21785760|21785760|21785760|21785760 21786682|21786682|21786682|21786682|21786682|21786589|21786682 3R - 21786224 21786278 3'utr CASK FlyBase G53258.1 TTTAATCGATTGTATTTGCCATTCCATGCTCAATGTGTTATATTTTACGATTATT 9 21786245 0.891542328 5 8 82 1 1.146128036 0.357142857 0.333333333 0.571428571 9 0 0 14 3R:21786224-21786278 6 CASK FBtr0301328|FBtr0084161|FBtr0330368|FBtr0112872|FBtr0084162|FBtr0112873|FBtr0301327 21785760|21785760|21785760|21785760|21785760|21785760|21783398 21786682|21786682|21786589|21786682|21786682|21786682|21786682 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 21786232 21786275 3'utr CASK FlyBase G40240.1 AATCGATTGTATTTGCCATTCCATGCTCAATGTGTTATATTTTA 14 21786245 0.723780237 4 13 136 0.875 1.322219295 0.125 0.571428571 0.75 14 3 0 21 3R:21786232-21786275 6 8.5 2991 FBgn0013759 1781.206667 49.49333333 75.88666667 0.004772046 0.171740302 0.112009136 0 0 0 0.15 dme-bantam-3p 8mer-A1 TGATCTCA 3R 21851167 21851174 - 3R_21851167_21851174_- 0.631094482 0.631124414 0.631109448 2.11E-05 glec FBtr0084157 21850692 21851709 3R - 21851137 21851363 3'utr glec FlyBase G53271.1 GATATCGGTCTTATAATGGAAATTATTAAGTTAATGGATATGTGCTAATGTTAGACAAGCGATCGACAGCGCCATGCATCCACTATATATAGACTAAACCCCAACCCAAACCAATTCAAGCGTTCTCAGCGTGTTTTCGGGTCCAGATGCACGCGTGTGCCAAAAGTATTTACAATTTACTTTGTGTCATGATCTCAATTATTAAAAACAATTTTATTATTTTGTTT 358 21851174 0.987084384 40 342 2981 0.971365639 2.042378598 0.167400881 0.198879552 0.370044053 357 10 3 441 3R:21851137-21851363 8 glec FBtr0084157 21850692 21851709 TGATCTCA 8mer-A1 dme-bantam-3p 3R - 21851154 21851329 3'utr glec FlyBase G40253.1 TGGATATGTGCTAATGTTAGACAAGCGATCGACAGCGCCATGCATCCACTATATATAGACTAAACCCCAACCCAAACCAATTCAAGCGTTCTCAGCGTGTTTTCGGGTCCAGATGCACGCGTGTGCCAAAAGTATTTACAATTTACTTTGTGTCATGATCTCAATTATTAAAAACA 230 21851174 0.897124119 29 221 1929 0.962427746 2.045322979 0.161849711 0.382608696 0.589595376 230 11 2 333 3R:21851154-21851329 8 205.5 2992 FBgn0015229 300 18.05666667 27.87 0.685 11.3808381 7.373519914 0 0 0 0.15 dme-miR-283-5p 8mer-A1 TGATATTA 3R 21851645 21851652 - 3R_21851645_21851652_- 0.413707372 0.590463565 0.502085469 0.124985508 glec FBtr0084157 21850692 21851709 3R - 21851623 21851696 3'utr glec FlyBase G53273.1 TGACGATGACAAATAGCCCCTGGCGGAGCAATAATTGCAATATATGATATTAATTGTAAATGTAATTTTAATTT 24 21851656 0.858994323 8 23 158 0.964285714 1.431363764 0.142857143 0.125 0.25 24 1 0 27 3R:21851623-21851696 8 glec FBtr0084157 21850692 21851709 TGATATTA 8mer-A1 dme-miR-283-5p 3R - 21851624 21851696 3'utr glec FlyBase G40256.1 TGACGATGACAAATAGCCCCTGGCGGAGCAATAATTGCAATATATGATATTAATTGTAAATGTAATTTTAATT 18 21851664 0.931655859 10 18 110 1 1.51851394 0.121212121 0.555555556 0.757575758 18 0 0 33 3R:21851624-21851696 8 9 2993 FBgn0015229 300 18.05666667 27.87 0.03 0.498430866 0.322927879 4 12 8 0.15 dme-miR-1008-3p 8mer-A1 AGCTGTGA 3R 22016456 22016463 - 3R_22016456_22016463_- 0.615707572 0.637544337 0.626625954 0.015440879 CG6439 FBtr0084190 22016389 22016987 3R - 22016450 22016491 3'utr CG6439 FlyBase G53277.1 ATGGCTTTGAGTGGACCCACTCCACTGGAGCTGTGAGAAAGA 7 22016466 0.862281452 3 7 43 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3R:22016450-22016491 8 CG6439 FBtr0084190 22016389 22016987 AGCTGTGA 8mer-A1 dme-miR-1008-3p 3R - 22016451 22016484 3'utr CG6439 FlyBase G40259.1 TGAGTGGACCCACTCCACTGGAGCTGTGAGAAAG 5 22016466 0.930631675 3 5 18 1 0.903089987 0.125 0.4 0.625 5 0 0 8 3R:22016451-22016484 8 6 2994 FBgn0038922 288 18.82 28.82333333 0.020833333 0.318809777 0.208164681 3 3 3 0.15 dme-miR-184-5p 8mer-A1 TGATAAGA 3R 22077747 22077754 + 3R_22077747_22077754_+ 0.595024742 0.594242041 0.594633391 0.000553452 how FBtr0301402|FBtr0335195|FBtr0301401|FBtr0084177 22074557|22074557|22074557|22074557 22078463|22079321|22079321|22079321 3R + 22077727 22077758 3'utr how FlyBase G44601.1 AAGGCAATTAAGCAAACGATTGATAAGAGAAT 5 22077746 0.889513448 2 4 14 1 0.698970004 0 0 0 5 0 0 5 3R:22077727-22077758 8 how FBtr0301401|FBtr0084177|FBtr0301402|FBtr0335195 22074557|22074557|22074557|22074557 22079321|22079321|22078463|22079321 TGATAAGA 8mer-A1 dme-miR-184-5p 3R + 22077727 22077759 3'utr how FlyBase G33689.1 AAGGCAATTAAGCAAACGATTGATAAGAGAATC 5 22077746 0.876565913 2 5 15 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:22077727-22077759 8 4.5 2995 FBgn0264491 669.8 25.87 39.62333333 0.006718423 0.173946656 0.113569446 1 1 1 0.15 dme-miR-33-5p 7mer-A1 AATGCAA 3R 22077848 22077854 + 3R_22077848_22077854_+ 0.559874228 0.60747223 0.583673229 0.033656869 how FBtr0301402|FBtr0335195|FBtr0301401|FBtr0084177 22074557|22074557|22074557|22074557 22078463|22079321|22079321|22079321 3R + 22077824 22077860 3'utr how FlyBase G44602.1 AGTTCAACGAACAAAAACATACTTAATGCAAGCATAT 31 22077846 0.664302466 3 31 124 1 1.531478917 0 0.096774194 0.176470588 31 0 0 34 3R:22077824-22077860 7 how FBtr0301401|FBtr0084177|FBtr0301402|FBtr0335195 22074557|22074557|22074557|22074557 22079321|22079321|22078463|22079321 AATGCAA 7mer-A1 dme-miR-33-5p 3R + 22077803 22077873 3'utr how FlyBase G33690.1 CAAGTTAGTTCTTAGTGTAAAAGTTCAACGAACAAAAACATACTTAATGCAAGCATATACATATATATATA 17 22077846 0.962764322 4 15 85 0.9 0.954242509 0 0.470588235 0.7 17 1 2 27 3R:22077803-22077873 7 23 2996 FBgn0264491 669.8 25.87 39.62333333 0.034338609 0.889060688 0.580466055 2 2 2 0.15 dme-miR-1003-3p 8mer-A1 ATGTGAGA 3R 22078843 22078850 + 3R_22078843_22078850_+ 0.641563964 0.630332197 0.635948081 0.007942082 how FBtr0335195|FBtr0301401|FBtr0084177 22074557|22074557|22074557 22079321|22079321|22079321 3R + 22078819 22078894 3'utr how FlyBase G44606.1 ACTCTGTTGAAATTATTCTGCGAAATGTGAGACTTATACTCAGAAACAAAACGATGTTCAACCACATGGGAGTTGA 27 22078846 0.969065254 5 26 149 1 1.477121255 0.033333333 0.111111111 0.2 27 0 0 30 3R:22078819-22078894 8 how FBtr0301401|FBtr0084177|FBtr0335195 22074557|22074557|22074557 22079321|22079321|22079321 ATGTGAGA 8mer-A1 dme-miR-1003-3p 3R + 22078809 22078862 3'utr how FlyBase G33692.1 GTATACAGAAACTCTGTTGAAATTATTCTGCGAAATGTGAGACTTATACTCAGA 25 22078846 0.964281605 4 25 135 1 1.51851394 0.03030303 0.24 0.424242424 25 0 0 33 3R:22078809-22078862 8 24.5 2997 FBgn0264491 669.8 25.87 39.62333333 0.036578083 0.947042907 0.618322537 -3 -3 -3 0.15 dme-miR-1012-3p 7mer-m8 TTGACTA 3R 22364500 22364506 + 3R_22364500_22364506_+ 0.631103395 0.631031625 0.63106751 5.08E-05 Muted FBtr0110878|FBtr0344526 22363523|22363523 22364580|22364580 3R + 22364474 22364535 stop_codon Muted FlyBase G44628.1 TCAAGTCCAGACATTGAAACCCCATGTTGACTAGATAGATGATCTGCGAGTAAAAATCGTTC 8 22364513 0.977173596 2 7 51 1 1.079181246 0 0.375 0.583333333 8 0 0 12 3R:22364474-22364535 7 Muted FBtr0344526|FBtr0110878 22363523|22363523 22364580|22364580 TTGACTA 7mer-m8 dme-miR-1012-3p 3R + 22364466 22364524 stop_codon Muted FlyBase G33710.1 GAGGGAAGTCAAGTCCAGACATTGAAACCCCATGTTGACTAGATAGATGATCTGCGAGT 9 22364513 0.957884778 5 9 44 1 1.113943352 0.153846154 0.444444444 0.615384615 9 0 0 13 3R:22364466-22364524 7 7 2998 FBgn0083967 164.1666667 13.59 20.94666667 0.042639594 0.515084621 0.33418205 -13 -13 -13 0.15 dme-miR-980-3p 6mer2-7 GCAGCT 3R 22372514 22372519 + 3R_22372514_22372519_+ 0.951916756 0.955397685 0.95365722 0.002461368 PyK FBtr0084213|FBtr0084214 22372480|22372480 22372746|22372746 3R + 22372472 22372621 stop_codon PyK FlyBase G44639.1 CGTCGAATAAATTCTGCCGCTCAGGAAGTACCTGGATGCGTCGCAGCTGCCGCGGGCGTCGCGTTGATTACTGTTAATAACCAAGTTAATTTATTAATTACACAATATTCGGAATATTGGAAACTGCAGGAGGCTGCTGGAACCGCTGTC 68 22372507 0.824475925 20 56 358 0.820512821 1.329058719 0.371794872 0.147058824 0.256410256 68 12 2 64 3R:22372472-22372621 6 PyK FBtr0084213|FBtr0084214 22372480|22372480 22372746|22372746 GCAGCT 6mer2-7 dme-miR-980-3p 3R + 22372479 22372553 stop_codon PyK FlyBase G33723.1 TAAATTCTGCCGCTCAGGAAGTACCTGGATGCGTCGCAGCTGCCGCGGGCGTCGCGTTGATTACTGTTAATAACC 34 22372519 0.882833144 10 33 171 0.977777778 1.643452676 0.333333333 0.294117647 0.466666667 34 1 0 44 3R:22372479-22372553 6 29.5 2999 FBgn0267385 2164.02 133.4933333 203.1566667 0.013632037 0.220984818 0.145208132 7 -5 1 0.15 dme-miR-184-3p 7mer-m8 TCCGTCC 3R 22418799 22418805 + 3R_22418799_22418805_+ 0.661594003 0.66074696 0.661170481 0.000598919 lqfR FBtr0299515 22418577 22419051 3R + 22418774 22418829 3'utr lqfR FlyBase G44679.1 CCGGATCAAACCCATTAATTCCACATCCGTCCTGATCGTCCACTCGGAATTTGAAA 51 22418806 0.968644362 7 46 328 0.918032787 1.447158031 0.180327869 0.117647059 0.262295082 51 4 1 56 3R:22418774-22418829 7 lqfR FBtr0299515 22418577 22419051 TCCGTCC 7mer-m8 dme-miR-184-3p 3R + 22418788 22418826 3'utr lqfR FlyBase G33751.1 TTAATTCCACATCCGTCCTGATCGTCCACTCGGAATTTG 24 22418806 0.713692323 4 21 148 0.842105263 1.505149978 0.131578947 0.458333333 0.657894737 24 6 0 32 3R:22418788-22418826 7 37 3000 FBgn0261279 676.23 25.48666667 39.00333333 0.054715112 1.451739472 0.948636869 -7 -7 -7 0.15 dme-miR-11-3p 7mer-m1 TGTGATG 3R 22422748 22422754 + 3R_22422748_22422754_+ 0.503486239 0.517985042 0.51073564 0.0102522 mats FBtr0084229|FBtr0345205|FBtr0337044 22422673|22422673|22422673 22422846|22422846|22423302 3R + 22422674 22422802 3'utr mats FlyBase G44686.1 GGAATCACTGCATGGAGCCGCGAATTTTCGCGATTCCGGCGGCGGTGGTGGTGGTCTGCGCTTGCAGTTGGACTTGTGATGAAAGCGCTCTGGCAGACTCGTGTATTACGCTTTAGTTAGTTACCGCCA 98 22422747 0.97055308 19 92 744 0.928571429 1.539912085 0.303571429 0.12244898 0.232142857 98 6 2 104 3R:22422674-22422802 7 mats FBtr0084229|FBtr0345205|FBtr0337044 22422673|22422673|22422673 22422846|22422846|22423302 TGTGATG 7mer-m1 dme-miR-11-3p 3R + 22422700 22422795 3'utr mats FlyBase G33759.1 TTCGCGATTCCGGCGGCGGTGGTGGTGGTCTGCGCTTGCAGTTGGACTTGTGATGAAAGCGCTCTGGCAGACTCGTGTATTACGCTTTAGTTAGTT 78 22422747 0.779046785 15 74 549 0.937007874 1.598425707 0.417322835 0.41025641 0.637795276 78 6 2 119 3R:22422700-22422795 7 63.5 3001 FBgn0038965 132.6666667 9.696666667 14.72333333 0.478643216 6.548642145 4.312882047 1 1 1 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 22460604 22460610 + 3R_22460604_22460610_+ 0.818303603 0.818322746 0.818313175 1.35E-05 CG34376 FBtr0112609 22460499 22460749 3R + 22460515 22460626 3'utr CG34376 FlyBase G44706.1 AAATAGCAGGTCAAATGACAGTTAAGTACAAAAGTGGAATGATTGCAATAATACTCAAATACACTAAAGACGGCGTAACCAAAACAATTCCAAAGAATTTAGTTAATACATA 54 22460602 0.889745512 6 53 297 0.983050847 1.462397998 0.06779661 0.074074074 0.152542373 54 0 1 58 3R:22460515-22460626 7 CG34376 FBtr0112609 22460499 22460749 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 22460567 22460630 3'utr CG34376 FlyBase G33775.1 ACTCAAATACACTAAAGACGGCGTAACCAAAACAATTCCAAAGAATTTAGTTAATACATAATAA 24 22460602 0.969706051 2 23 129 0.974358974 1.579783597 0 0.5 0.692307692 24 1 0 38 3R:22460567-22460630 7 31.5 3002 FBgn0085405 134.82 6.636666667 10.25333333 0.23364486 4.746358614 3.072171651 2 2 2 0.15 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 22460697 22460704 + 3R_22460697_22460704_+ 0.617270069 0.617297079 0.617283574 1.91E-05 CG34376 FBtr0112609 22460499 22460749 3R + 22460672 22460727 3'utr CG34376 FlyBase G44707.1 TCGTTTTTATTATTGTACGTTGCATTAGCTTTACACTGTAATAAATGTTGAATTTG 13 22460696 0.913471599 2 11 128 0.882352941 0.698970004 0.588235294 0.230769231 0.411764706 13 0 2 15 3R:22460672-22460727 8 CG34376 FBtr0112609 22460499 22460749 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R + 22460670 22460712 3'utr CG34376 FlyBase G33776.1 TATCGTTTTTATTATTGTACGTTGCATTAGCTTTACACTGTAA 10 22460696 0.98369017 2 10 82 1 1.079181246 0.333333333 0.2 0.333333333 10 0 0 12 3R:22460670-22460712 8 10.5 3003 FBgn0085405 134.82 6.636666667 10.25333333 0.07788162 1.582119538 1.024057217 1 1 1 0.15 dme-miR-1006-3p 7mer-A1 GAATTTA 3R 22464083 22464089 + 3R_22464083_22464089_+ 0.823329108 0.823323826 0.823326467 3.75E-06 AP-2mu FBtr0084253|FBtr0301866|FBtr0084252 22464039|22464039|22464039 22464603|22464603|22464603 3R + 22464068 22464106 5'utr AP-2mu FlyBase G44715.1 AAGATTATCACAATTGAATTTAACGAGATGAATGGAGAA 6 22464082 0.727082637 3 4 36 0.875 0.84509804 0.25 0.333333333 0.5 6 1 0 7 3R:22464068-22464106 7 AP-2mu FBtr0301866|FBtr0084252|FBtr0084253 22464039|22464039|22464039 22464603|22464603|22464603 GAATTTA 7mer-A1 dme-miR-1006-3p 3R + 22464048 22464098 5'utr AP-2mu FlyBase G33781.1 AAGCATCCCCATCACGGAGCAAGATTATCACAATTGAATTTAACGAGATGA 6 22464072 0.965656417 4 6 31 1 1.041392685 0.090909091 0.5 0.727272727 6 0 0 11 3R:22464048-22464098 7 5 3004 FBgn0263351 730.8 44.74666667 67.98333333 0.006841817 0.111740167 0.073547438 1 11 6 0.15 dme-miR-283-5p 7mer-m8 TGATATT 3R 22464543 22464549 + 3R_22464543_22464549_+ 0.613086623 0.619916332 0.616501478 0.004829327 AP-2mu FBtr0084253|FBtr0301866|FBtr0084252 22464039|22464039|22464039 22464603|22464603|22464603 3R + 22464523 22464597 3'utr AP-2mu FlyBase G44719.1 TCTGTCAGCGCTATCAATATTGATATTCAAGTGTTAATAATATTCGAATTGTTTAATAAATAAATTAGCATGATA 29 22464542 0.974462635 3 27 254 0.942857143 1.51851394 0.457142857 0.206896552 0.342857143 29 2 0 33 3R:22464523-22464597 7 AP-2mu FBtr0301866|FBtr0084252|FBtr0084253 22464039|22464039|22464039 22464603|22464603|22464603 TGATATT 7mer-m8 dme-miR-283-5p 3R + 22464513 22464561 3'utr AP-2mu FlyBase G33784.2 AGACCAAAACTCTGTCAGCGCTATCAATATTGATATTCAAGTGTTAATA 15 22464542 0.747257157 5 13 125 0.956521739 1.342422681 0.304347826 0.4 0.608695652 15 1 0 22 3R:22464513-22464561 7 19.5 3005 FBgn0263351 730.8 44.74666667 67.98333333 0.026683087 0.435786651 0.286835009 1 1 1 0.15 dme-miR-932-5p 7mer-A1 GAATTGA 3R 22608087 22608093 + 3R_22608087_22608093_+ 0.822889146 0.823349328 0.823119237 0.000325411 Efa6 FBtr0334560|FBtr0113396|FBtr0113395|FBtr0302187|FBtr0334559 22605937|22607217|22607217|22606893|22607217 22608471|22608471|22608471|22608842|22608471 3R + 22608024 22608122 3'utr Efa6 FlyBase G44766.1 AATGAACAATATCTCTACACAACCACAAGATGGAGAACATCGGCAGTAACAATAACGAAATGAGAATTGAGAAGAGGACAAGCGCATTAGCATTAAGCT 23 22608090 0.749156598 9 22 62 1 1.431363764 0.222222222 0.130434783 0.259259259 23 0 0 27 3R:22608024-22608122 7 Efa6 FBtr0113396|FBtr0113395|FBtr0302187|FBtr0334559|FBtr0334560 22607217|22607217|22606893|22607217|22605937 22608471|22608471|22608842|22608471|22608471 GAATTGA 7mer-A1 dme-miR-932-5p 3R + 22608076 22608107 3'utr Efa6 FlyBase G33821.1 TAACGAAATGAGAATTGAGAAGAGGACAAGCG 6 22608090 0.796929093 3 6 13 1 1 0.8 0.5 0.7 6 0 0 10 3R:22608076-22608107 7 8 3006 FBgn0051158 976.3733333 19.19333333 29.44333333 0.008193587 0.416811393 0.271708366 -3 -3 -3 0.15 dme-miR-1003-3p 6mer3-8 ATGTGA 3R 22608670 22608675 + 3R_22608670_22608675_+ 0.986097241 0.998882452 0.992489846 0.009040572 Efa6 FBtr0302187 22606893 22608842 3R + 22608632 22608719 3'utr Efa6 FlyBase G44769.1 AGGGAAACAAGAAGACGAACGTGGAGACGGTGATTTTTATGTGAACATTTATTACTAACTGATAAGCTTTGATTAAACTTAGGAAAGC 25 22608666 0.982650419 7 24 180 0.939393939 1.491361694 0 0.2 0.393939394 25 2 0 31 3R:22608632-22608719 6 Efa6 FBtr0302187 22606893 22608842 ATGTGA 6mer3-8 dme-miR-1003-3p 3R + 22608641 22608681 3'utr Efa6 FlyBase G33823.1 AGAAGACGAACGTGGAGACGGTGATTTTTATGTGAACATTT 15 22608667 0.902985717 4 15 101 1 1.278753601 0 0.266666667 0.421052632 15 0 0 19 3R:22608641-22608681 6 5 3007 FBgn0051158 976.3733333 19.19333333 29.44333333 0.005120992 0.260507121 0.169817729 4 3 3.5 0.15 dme-miR-14-3p 7mer-A1 AGACTGA 3R 22681901 22681907 + 3R_22681901_22681907_+ 0.81823512 0.81976529 0.819000205 0.001082015 wake FBtr0344409|FBtr0344403|FBtr0344405|FBtr0344407|FBtr0344408|FBtr0344406|FBtr0344404 22681578|22681578|22681578|22681578|22681578|22681578|22681578 22682176|22682176|22683827|22682176|22682176|22682176|22682176 3R + 22681880 22681923 3'utr wake FlyBase G44782.1 TCGTTGACCAATTCCAGAATTAGACTGAATTACTTATGTATGCT 170 22681899 0.842890564 7 166 1175 0.971962617 2.318063335 0.08411215 0.223529412 0.38317757 170 6 0 208 3R:22681880-22681923 7 wake FBtr0344408|FBtr0344406|FBtr0344404|FBtr0344409|FBtr0344403|FBtr0344405|FBtr0344407 22681578|22681578|22681578|22681578|22681578|22681578|22681578 22682176|22682176|22682176|22682176|22682176|22683827|22682176 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 22681879 22681941 3'utr wake FlyBase G33830.1 ATCGTTGACCAATTCCAGAATTAGACTGAATTACTTATGTATGCTGCAATGGCAAACTGATGA 104 22681899 0.980325128 7 101 715 0.981012658 1.889301703 0.139240506 0.375 0.588607595 104 2 1 155 3R:22681879-22681941 7 135.5 3008 FBgn0266418 402.2066667 8.453333333 12.89666667 0.336891482 16.02917981 10.50659085 2 2 2 0.15 dme-miR-184-5p 6mer3-8 TGATAA 3R 22711003 22711008 - 3R_22711003_22711008_- 0.495330055 0.863002136 0.679166095 0.259983364 wge FBtr0310427|FBtr0310426 22710881|22710881 22711715|22711715 3R - 22710971 22711084 3'utr wge FlyBase G53471.1 TATAAATGTAACAATTCAATGTGATAGCAAAACAAAACCAGATGTTGATGTGTACAGAGGAGAGAATAAGTATAGATGATAAATAAGAGATCAAGCAGAATGTGTGTGTTGAAT 37 22711018 0.880243704 12 34 212 0.906976744 1.290034611 0.11627907 0.135135135 0.255813953 37 3 1 39 3R:22710971-22711084 6 wge FBtr0310426|FBtr0310427 22710881|22710881 22711715|22711715 TGATAA 6mer3-8 dme-miR-184-5p 3R - 22710966 22711045 3'utr wge FlyBase G40411.1 AGATGTTGATGTGTACAGAGGAGAGAATAAGTATAGATGATAAATAAGAGATCAAGCAGAATGTGTGTGTTGAATATTTA 13 22711017 0.805787125 8 13 78 1 1.342422681 0.136363636 0.461538462 0.681818182 13 0 0 22 3R:22710966-22711045 6 10.5 3009 FBgn0051151 1493.583333 28.87666667 44.59333333 0.007030073 0.363615376 0.235461205 10 9 9.5 0.15 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3R 22731169 22731174 + 3R_22731169_22731174_+ 0.998552174 0.739605567 0.86907887 0.183102897 CG45049 FBtr0344360|FBtr0344361|FBtr0344359 22730106|22730106|22730106 22732362|22732362|22732362 3R + 22731144 22731188 3'utr CG45049 FlyBase G44806.1 CGCAACTGACAGCAATAAAAACGTTTTTGACACCTTTTGTTAACA 14 22731170 0.648597243 5 11 94 0.8 1.079181246 0 0.071428571 0.133333333 14 3 0 12 3R:22731144-22731188 6 CG45049 FBtr0344360|FBtr0344359|FBtr0344361 22730106|22730106|22730106 22732362|22732362|22732362 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3R + 22731132 22731183 3'utr CG45049 FlyBase G33849.1 AAACATATCACACGCAACTGACAGCAATAAAAACGTTTTTGACACCTTTTGT 7 22731159 0.984734749 4 6 45 0.777777778 0.84509804 0.111111111 0.285714286 0.444444444 7 2 0 7 3R:22731132-22731183 6 9.5 3010 FBgn0266409 707.48 41.45666667 63.71333333 0.013427941 0.229154941 0.149105368 -1 10 4.5 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 3R 22734034 22734040 - 3R_22734034_22734040_- 0.778541611 0.779608845 0.779075228 0.000754624 Dcr-1 FBtr0084324 22734005 22734108 3R - 22734027 22734064 3'utr Dcr-1 FlyBase G53522.1 TTTTTAGACATAAGAACTTTAATTGTACAAATCTTAAA 11 22734042 0.759029527 3 11 110 1 1.041392685 0 0 0 11 0 0 11 3R:22734027-22734064 7 Dcr-1 FBtr0084324 22734005 22734108 GTACAAA 7mer-A1 dme-miR-305-5p 3R - 22734006 22734064 3'utr Dcr-1 FlyBase G40449.1 TTTTTAGACATAAGAACTTTAATTGTACAAATCTTAAATAGATTGTCTATGGTCGAATA 14 22734042 0.985401633 5 14 130 1 1.301029996 0 0.285714286 0.5 14 0 0 20 3R:22734006-22734064 7 11.5 3011 FBgn0039016 718.3333333 12.47 19.05666667 0.016009281 0.922213312 0.603463355 2 2 2 0.15 dme-miR-92b-3p 6mer2-7 TGCAAT 3R 22734092 22734097 - 3R_22734092_22734097_- 0.998004597 0.999327918 0.998666258 0.000935714 Dcr-1 FBtr0084324 22734005 22734108 3R - 22734068 22734137 stop_codon Dcr-1 FlyBase G53523.1 AGCAGGGCTTGATAGCCAAAAAAGACTAAGAAGTCATCGCTGCAATCGTGTTTCATTAGATTTAATGATT 18 22734086 0.920577005 8 17 146 0.95 1.278753601 0.2 0.055555556 0.15 18 1 0 19 3R:22734068-22734137 6 Dcr-1 FBtr0084324 22734005 22734108 TGCAAT 6mer2-7 dme-miR-92b-3p 3R - 22734068 22734181 stop_codon Dcr-1 FlyBase G40450.1 TGCCAAGTGCACGGCGGCCAAATGCGCATTGCGCCAACTCAAAAAGCAGGGCTTGATAGCCAAAAAAGACTAAGAAGTCATCGCTGCAATCGTGTTTCATTAGATTTAATGATT 19 22734083 0.986918323 8 16 138 0.807692308 0.720159303 0.153846154 0.315789474 0.5 19 2 3 21 3R:22734068-22734181 6 10 3012 FBgn0039016 718.3333333 12.47 19.05666667 0.013921114 0.801924619 0.524750743 -11 -14 -12.5 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 22793921 22793926 + 3R_22793921_22793926_+ 0.950661468 0.991450617 0.971056043 0.028842249 CG7029 FBtr0310037|FBtr0113271|FBtr0344297|FBtr0084312|FBtr0310038|FBtr0113270 22792678|22792678|22792678|22792678|22792678|22792678 22794030|22794030|22794030|22794030|22794030|22794030 3R + 22793849 22793959 3'utr CG7029 FlyBase G44849.1 TGTATAGCTACTCTTATTGTATTATGTACAAGCGGACGAAACACATATTATAGATTTGCGGGAGAATTTATCACCAAATGGATATGCGGGAGTATATTATGTATTAAAACG 26 22793931 0.902254448 13 25 173 0.962962963 1.113943352 0.259259259 0.038461538 0.074074074 26 0 1 26 3R:22793849-22793959 6 CG7029 FBtr0310038|FBtr0113270|FBtr0344297|FBtr0084312|FBtr0310037|FBtr0113271 22792678|22792678|22792678|22792678|22792678|22792678 22794030|22794030|22794030|22794030|22794030|22794030 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 22793911 22793956 3'utr CG7029 FlyBase G33878.2 AGAATTTATCACCAAATGGATATGCGGGAGTATATTATGTATTAAA 10 22793931 0.980977883 5 8 48 1 1.176091259 0 0.4 0.6 10 0 0 15 3R:22793911-22793956 6 10.5 3013 FBgn0039026 1187.603333 21.31 32.52666667 0.008841336 0.49272642 0.322812052 -10 -10 -10 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 3R 23049704 23049710 - 3R_23049704_23049710_- 0.782718024 0.782756967 0.782737496 2.76E-05 p53 FBtr0345262|FBtr0084360|FBtr0301765|FBtr0084359 23049655|23049655|23049655|23049655 23049964|23049964|23049964|23049964 3R - 23049682 23049726 3'utr p53 FlyBase G53557.1 ACAACAAACATACTCTGTACAAAAAAGCCAAAAGTGAATTTATTA 11 23049712 0.724762631 4 11 37 1 1.041392685 0 0 0 11 0 0 11 3R:23049682-23049726 7 p53 FBtr0301765|FBtr0084359|FBtr0345262|FBtr0084360 23049655|23049655|23049655|23049655 23049964|23049964|23049964|23049964 GTACAAA 7mer-A1 dme-miR-305-5p 3R - 23049664 23049726 3'utr p53 FlyBase G40468.1 ACAACAAACATACTCTGTACAAAAAAGCCAAAAGTGAATTTATTAAAGAGTTGTCATATTTTG 8 23049712 0.936389874 6 8 31 1 1.041392685 0.181818182 0.25 0.454545455 8 0 0 11 3R:23049664-23049726 7 7.5 3014 FBgn0039044 93.11333333 6.436666667 9.84 0.080547004 1.165199379 0.762195122 2 2 2 0.15 dme-miR-283-5p 7mer-m8 TGATATT 3R 23049831 23049837 - 3R_23049831_23049837_- 0.620203637 0.620199383 0.62020151 2.97E-06 p53 FBtr0345262|FBtr0084360|FBtr0301765|FBtr0084359 23049655|23049655|23049655|23049655 23049964|23049964|23049964|23049964 3R - 23049797 23049986 stop_codon p53 FlyBase G53559.1 ACGTGCCTACGAGCTGCCATGACTTCTGATCTGGTCGACAATCTCCCAGGTATCAGATACCTTTGAAATGTGTTGCATCTGTGGGGTATACTACATAGCTATTAGTATCTTAAGTTTGTATTAGTCCTTGTTCGTAAGGCGTTTAACGGTGATATTCCCCTTTTGGCATGTTCGATGGCCGAAAAGAAAA 127 23049832 0.976635608 29 120 1008 0.957055215 1.716003344 0.233128834 0.204724409 0.380368098 127 5 2 156 3R:23049797-23049986 7 p53 FBtr0301765|FBtr0084359|FBtr0345262|FBtr0084360 23049655|23049655|23049655|23049655 23049964|23049964|23049964|23049964 TGATATT 7mer-m8 dme-miR-283-5p 3R - 23049819 23049918 3'utr p53 FlyBase G40469.1 TGTGTTGCATCTGTGGGGTATACTACATAGCTATTAGTATCTTAAGTTTGTATTAGTCCTTGTTCGTAAGGCGTTTAACGGTGATATTCCCCTTTTGGCA 52 23049832 0.742390358 13 49 419 0.921052632 1.544068044 0.223684211 0.346153846 0.552631579 52 5 1 70 3R:23049819-23049918 7 56.5 3015 FBgn0039044 93.11333333 6.436666667 9.84 0.606787428 8.777835318 5.741869919 -5 -5 -5 0.15 dme-miR-14-3p 6mer3-8 AAGACT 3R 23114369 23114374 - 3R_23114369_23114374_- 0.999993726 0.99999004 0.999991883 2.62E-06 Rassf FBtr0084407 23114012 23114672 3R - 23114347 23114394 3'utr Rassf FlyBase G53574.1 CATTCGTTTAGAAAGCGTTTAAGACTTGTAACTAACCAAAAAATAATT 14 23114376 0.980246234 4 13 96 0.947368421 1.255272505 0.157894737 0.214285714 0.421052632 14 1 0 18 3R:23114347-23114394 6 Rassf FBtr0084407 23114012 23114672 AAGACT 6mer3-8 dme-miR-14-3p 3R - 23114323 23114409 3'utr Rassf FlyBase G40479.1 AATTCCAGGCATTTCCATTCGTTTAGAAAGCGTTTAAGACTTGTAACTAACCAAAAAATAATTATTAATCCACAACATTACCATACA 19 23114376 0.98397587 8 18 138 0.964285714 1.130333768 0.178571429 0.421052632 0.607142857 19 0 1 27 3R:23114323-23114409 6 15 3016 FBgn0039055 618.9666667 21.53666667 33.01666667 0.024233938 0.696486612 0.454316002 2 2 2 0.15 dme-miR-305-5p 7mer-m1 GTACAAT 3R 23123990 23123996 - 3R_23123990_23123996_- 0.765514765 0.765582899 0.765548832 4.82E-05 CG31365 FBtr0084406 23123960 23124296 3R - 23123971 23124006 3'utr CG31365 FlyBase G53587.1 ATAAGACGATGTACAATTTTATAGGCAAATATACGT 5 23123997 0.976482437 3 5 32 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:23123971-23124006 7 CG31365 FBtr0084406 23123960 23124296 GTACAAT 7mer-m1 dme-miR-305-5p 3R - 23123971 23124014 3'utr CG31365 FlyBase G40491.1 AATACCACATAAGACGATGTACAATTTTATAGGCAAATATACGT 13 23123990 0.633657946 4 11 86 0.75 1.176091259 0 0.461538462 0.65 13 5 0 15 3R:23123971-23124014 7 8.5 3017 FBgn0051365 445.6766667 23.35333333 35.95666667 0.019072123 0.363973737 0.236395661 1 -6 -2.5 0.15 dme-miR-970-3p 7mer-m8 TCTTATG 3R 23124001 23124007 + 3R_23124001_23124007_+ 0.646360286 0.651932826 0.649146556 0.003940353 CenB1A FBtr0084369|FBtr0084368 23123628|23123628 23124217|23124217 3R + 23123971 23124025 3'utr CenB1A FlyBase G44878.1 ACGTATATTTGCCTATAAAATTGTACATCGTCTTATGTGGTATTTATTAAACGAT 7 23124003 0.991194347 5 6 68 0.9 0.954242509 0.2 0.428571429 0.6 7 1 0 9 3R:23123971-23124025 7 CenB1A FBtr0084369|FBtr0084368 23123628|23123628 23124217|23124217 TCTTATG 7mer-m8 dme-miR-970-3p 3R + 23123981 23124018 3'utr CenB1A FlyBase G33900.1 GCCTATAAAATTGTACATCGTCTTATGTGGTATTTATT 5 23124004 0.988207458 3 5 52 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:23123981-23124018 7 5 3018 FBgn0039056 579.2733333 23.55666667 35.98 0.008631504 0.212254139 0.138966092 -2 -3 -2.5 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 23124213 23124218 - 3R_23124213_23124218_- 0.869727189 0.90892956 0.889328374 0.027720283 CG31365 FBtr0084406 23123960 23124296 3R - 23124095 23124249 3'utr CG31365 FlyBase G53588.1 ATGTTTTACACCTGAAGAGACCAACTTTGATTGATCTGAATATTTTACAACTTTATTCGCGAACCTAGAGTGCTCACAACAGTTGGCACCAAAAATCATCAACATGATAGCGTTAAAACATTTAGAAACATGCAGCATTAAACAGTTTAGCAAAC 47 23124219 0.982773831 13 44 359 0.885245902 1.73239376 0.049180328 0.255319149 0.426229508 47 7 0 54 3R:23124095-23124249 6 CG31365 FBtr0084406 23123960 23124296 TGATCT 6mer3-8 dme-bantam-3p 3R - 23124197 23124258 3'utr CG31365 FlyBase G40492.1 TGGACCACCATGTTTTACACCTGAAGAGACCAACTTTGATTGATCTGAATATTTTACAACTT 36 23124219 0.747354352 6 36 310 1 1.740362689 0.109090909 0.388888889 0.6 36 0 0 55 3R:23124197-23124258 6 31 3019 FBgn0051365 445.6766667 23.35333333 35.95666667 0.069557153 1.327433628 0.862148883 1 1 1 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3R 23151617 23151623 - 3R_23151617_23151623_- 0.41067464 0.443116156 0.426895398 0.022939675 unk FBtr0084402|FBtr0305573|FBtr0337052 23151562|23150239|23149651 23153939|23153939|23153939 3R - 23151574 23151647 3'utr unk FlyBase G53602.1 ACGCTACTGTAAGAGTGATTTTTATGTGATTTTGAAACTACTTGAATATGTGATCCAGAAATATATAAAAAACA 18 23151628 0.971416864 8 18 158 1 1.342422681 0.363636364 0.222222222 0.363636364 18 0 0 22 3R:23151574-23151647 7 unk FBtr0305573|FBtr0337052|FBtr0084402 23150239|23149651|23151562 23153939|23153939|23153939 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 23151611 23151647 3'utr unk FlyBase G40506.1 ACGCTACTGTAAGAGTGATTTTTATGTGATTTTGAAA 16 23151616 0.775366016 7 14 167 0.896551724 1.113943352 0.275862069 0.625 0.793103448 16 2 1 26 3R:23151611-23151647 7 9 3020 FBgn0004395 913.0833333 29.83666667 45.42666667 0.009856713 0.301642275 0.198121515 5 -7 -1 0.15 dme-miR-305-5p 6mer2-7 GTACAA 3R 23152598 23152603 - 3R_23152598_23152603_- 0.679744976 0.827468646 0.753606811 0.104456359 unk FBtr0305572|FBtr0084402|FBtr0305571|FBtr0305573|FBtr0337052 23152090|23151562|23152090|23150239|23149651 23153939|23153939|23153939|23153939|23153939 3R - 23152522 23152621 3'utr unk FlyBase G53605.1 TCCAGCATTTGGCTGATTGTACAAGAACGAATATGAACAGATATATATTTATGGGAAATTTGAACGCAGATTCGATGAGTGTGATGTTGAAAGCATAAAC 11 23152579 0.982151324 7 10 68 0.916666667 0.740362689 0.083333333 0.090909091 0.166666667 11 0 1 11 3R:23152522-23152621 6 unk FBtr0305573|FBtr0337052|FBtr0305571|FBtr0305572|FBtr0084402 23150239|23149651|23152090|23152090|23151562 23153939|23153939|23153939|23153939|23153939 GTACAA 6mer2-7 dme-miR-305-5p 3R - 23152579 23152624 3'utr unk FlyBase G40508.1 AAATCCAGCATTTGGCTGATTGTACAAGAACGAATATGAACAGATA 5 23152605 0.970803386 3 5 25 1 0.84509804 0 0.4 0.571428571 5 0 0 7 3R:23152579-23152624 6 4.5 3021 FBgn0004395 913.0833333 29.83666667 45.42666667 0.004928356 0.150821137 0.099060757 -24 2 -11 0.15 dme-miR-8-3p 6mer2-7 AGTATT 3R 23152636 23152641 - 3R_23152636_23152641_- 0.999799187 0.985544966 0.992672076 0.010079241 unk FBtr0305572|FBtr0084402|FBtr0305571|FBtr0305573|FBtr0337052 23152090|23151562|23152090|23150239|23149651 23153939|23153939|23153939|23153939|23153939 3R - 23152630 23152714 3'utr unk FlyBase G53606.1 TTTACTTTCATAGTCTCAACTGGACGCTTCCAAATTAGTAAAAGCATAAAATGAATCGTCAATGTCAAAACGTAGTATTTAAGTC 10 23152663 0.952063577 8 9 73 1 1.079181246 0 0.2 0.333333333 10 0 0 12 3R:23152630-23152714 6 unk FBtr0305573|FBtr0337052|FBtr0305571|FBtr0305572|FBtr0084402 23150239|23149651|23152090|23152090|23151562 23153939|23153939|23153939|23153939|23153939 AGTATT 6mer2-7 dme-miR-8-3p 3R - 23152630 23152672 3'utr unk FlyBase G40509.1 AGCATAAAATGAATCGTCAATGTCAAAACGTAGTATTTAAGTC 5 23152635 0.962851323 4 5 28 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:23152630-23152672 6 3 3022 FBgn0004395 913.0833333 29.83666667 45.42666667 0.003285571 0.100547425 0.066040505 22 -6 8 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3R 23152762 23152768 - 3R_23152762_23152768_- 0.521221584 0.5212231 0.521222342 1.06E-06 unk FBtr0305572|FBtr0084402|FBtr0305571|FBtr0305573|FBtr0337052 23152090|23151562|23152090|23150239|23149651 23153939|23153939|23153939|23153939|23153939 3R - 23152725 23152793 3'utr unk FlyBase G53607.1 ACGTATATAATCTATTAGGTTACTTTGTGATTTGAATAGTGCTTTAAGTACTTACTTTGCAGATGACTT 63 23152762 0.992289151 12 60 681 0.952941176 1.306425028 0.082352941 0.253968254 0.447058824 63 1 3 81 3R:23152725-23152793 7 unk FBtr0305573|FBtr0337052|FBtr0305571|FBtr0305572|FBtr0084402 23150239|23149651|23152090|23152090|23151562 23153939|23153939|23153939|23153939|23153939 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 23152728 23152793 3'utr unk FlyBase G40511.1 ACGTATATAATCTATTAGGTTACTTTGTGATTTGAATAGTGCTTTAAGTACTTACTTTGCAGATGA 47 23152762 0.991115233 9 45 476 0.97260274 1.550228353 0.054794521 0.340425532 0.575342466 47 1 1 71 3R:23152728-23152793 7 53.5 3023 FBgn0004395 913.0833333 29.83666667 45.42666667 0.05859268 1.793095743 1.177722336 -6 -6 -6 0.15 dme-miR-1012-3p 7mer-m8 TTGACTA 3R 23153237 23153243 - 3R_23153237_23153243_- 0.63149941 0.624620554 0.628059982 0.004864046 unk FBtr0305572|FBtr0084402|FBtr0084403|FBtr0305571|FBtr0305573|FBtr0337052 23152090|23151562|23153040|23152090|23150239|23149651 23153939|23153939|23153939|23153939|23153939|23153939 3R - 23153224 23153262 3'utr unk FlyBase G53610.1 TTCTAGACACTTTTAGCAATTGACTATTAACAAATTTAT 23 23153236 0.754473532 5 22 188 0.967741935 1.176091259 0 0.347826087 0.516129032 23 0 1 30 3R:23153224-23153262 7 unk FBtr0305573|FBtr0337052|FBtr0084403|FBtr0305571|FBtr0305572|FBtr0084402 23150239|23149651|23153040|23152090|23152090|23151562 23153939|23153939|23153939|23153939|23153939|23153939 TTGACTA 7mer-m8 dme-miR-1012-3p 3R - 23153224 23153254 3'utr unk FlyBase G40514.1 ACTTTTAGCAATTGACTATTAACAAATTTAT 17 23153236 0.854580238 4 17 131 1 1.491361694 0.032258065 0.588235294 0.774193548 17 0 0 31 3R:23153224-23153254 7 20 3024 FBgn0004395 913.0833333 29.83666667 45.42666667 0.021903806 0.670316166 0.440270032 -7 -7 -7 0.15 dme-miR-190-5p 6mer3-8 ACATAT 3R 23153405 23153410 - 3R_23153405_23153410_- 0.775104598 0.65621245 0.715658524 0.08406941 unk FBtr0305572|FBtr0084402|FBtr0084403|FBtr0305571|FBtr0305573|FBtr0337052 23152090|23151562|23153040|23152090|23150239|23149651 23153939|23153939|23153939|23153939|23153939|23153939 3R - 23153279 23153423 3'utr unk FlyBase G53611.1 TTTTTTTTTAACCACATATGTATCTCTATATTTGTATTTAAATATGCTACACTTTCAGTCATATTGTACTTTTCACTAGTATTACATAAGAAATTATGAGAACTAAACAATTACAAGATGTAATTGAATGAAAGATATATAAATA 105 23153405 0.987374535 20 102 911 0.952 2.075546961 0.048 0.161904762 0.296 105 6 0 119 3R:23153279-23153423 6 unk FBtr0305573|FBtr0337052|FBtr0084403|FBtr0305571|FBtr0305572|FBtr0084402 23150239|23149651|23153040|23152090|23152090|23151562 23153939|23153939|23153939|23153939|23153939|23153939 ACATAT 6mer3-8 dme-miR-190-5p 3R - 23153276 23153492 3'utr unk FlyBase G40515.1 GTTTAATATTCAATGTTTAGGCATACATATTTTCTAATCTACTGCACGAATTTGCAATGTCTCATTTATTTTTTTTTTAACCACATATGTATCTCTATATTTGTATTTAAATATGCTACACTTTCAGTCATATTGTACTTTTCACTAGTATTACATAAGAAATTATGAGAACTAAACAATTACAAGATGTAATTGAATGAAAGATATATAAATATAT 90 23153405 0.987709194 27 82 753 0.910447761 2.086359831 0.029850746 0.333333333 0.552238806 90 12 0 122 3R:23153276-23153492 6 47 3025 FBgn0004395 913.0833333 29.83666667 45.42666667 0.051473944 1.57524299 1.034634576 -5 -5 -5 0.15 dme-miR-283-5p 8mer-A1 TGATATTA 3R 23185294 23185301 + 3R_23185294_23185301_+ 0.590847066 0.590473596 0.590660331 0.000264104 Irk1 FBtr0336479|FBtr0336475|FBtr0336478|FBtr0336476|FBtr0336474|FBtr0336473|FBtr0336477 23184958|23184958|23184958|23184958|23184958|23184958|23184958 23185642|23185562|23185642|23185562|23185642|23185642|23185642 3R + 23185091 23185409 3'utr Irk1 FlyBase G44901.1 GAGCTGCTGCAGCTGTGAACATCCCTCAAAAAAATCCCCCTATCCTGCTGAAGTGGAGGCAATCTGATTGTTATCCACCTATCTACTATACTTACTACTAACCCTGAAACGATTGTACATGTTTATGTCTAGGCTAAGCTGATGAATGATTCACGTTGTTAGCTTTAGCTTTGTGTTGAATTTACTATAGTTAAGTTACAAATTGATATTAACGCAAAGTAAGATGTGAGACCCAGAAACCAAAATGCTGCAACTTAGACAACTAGATAAGTCATTAAACGGCTCACTTAACATGAAATTTATGCGAAGACGCAGCGGA 424 23185293 0.979824116 55 406 2960 0.951219512 1.859909919 0.234521576 0.198113208 0.362101313 424 20 6 507 3R:23185091-23185409 8 Irk1 FBtr0336474|FBtr0336473|FBtr0336477|FBtr0336479|FBtr0336475|FBtr0336478|FBtr0336476 23184958|23184958|23184958|23184958|23184958|23184958|23184958 23185642|23185642|23185642|23185642|23185562|23185642|23185562 TGATATTA 8mer-A1 dme-miR-283-5p 3R + 23185172 23185369 3'utr Irk1 FlyBase G33921.2 TCTACTATACTTACTACTAACCCTGAAACGATTGTACATGTTTATGTCTAGGCTAAGCTGATGAATGATTCACGTTGTTAGCTTTAGCTTTGTGTTGAATTTACTATAGTTAAGTTACAAATTGATATTAACGCAAAGTAAGATGTGAGACCCAGAAACCAAAATGCTGCAACTTAGACAACTAGATAAGTCATTAAA 206 23185293 0.976004611 35 197 1511 0.961805556 1.965358514 0.239583333 0.291262136 0.493055556 206 9 2 277 3R:23185172-23185369 8 120 3026 FBgn0265042 1730.336667 66.08666667 101.7066667 0.069350666 1.815797438 1.17986366 1 1 1 0.15 dme-miR-968-5p 6mer3-8 ACTACT 3R 23186000 23186005 - 3R_23186000_23186005_- 0.853306097 0.907609136 0.880457617 0.03839802 cnc FBtr0306755|FBtr0330372|FBtr0306744|FBtr0306747|FBtr0306754|FBtr0306751|FBtr0306749|FBtr0306745|FBtr0306746|FBtr0336455|FBtr0306750|FBtr0306748|FBtr0306753 23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578 23187443|23187302|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443 3R - 23185978 23186037 3'utr cnc FlyBase G53623.1 AAATTGAAATTGAACTAATTACCTACTATTGTACTACTACGCCTACGGACATAAAAAATA 18 23186008 0.982835979 3 17 132 0.952380952 1.301029996 0 0.166666667 0.285714286 18 1 0 20 3R:23185978-23186037 6 cnc FBtr0306751|FBtr0336455|FBtr0306748|FBtr0306746|FBtr0306750|FBtr0306754|FBtr0306749|FBtr0306745|FBtr0306753|FBtr0306747|FBtr0306744|FBtr0306755|FBtr0330372 23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578 23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187302 ACTACT 6mer3-8 dme-miR-968-5p 3R - 23185984 23186021 3'utr cnc FlyBase G40529.1 AATTACCTACTATTGTACTACTACGCCTACGGACATAA 12 23186008 0.703043382 2 11 79 1 1.342422681 0 0.666666667 0.818181818 12 0 0 22 3R:23185984-23186021 6 13 3027 FBgn0262975 1286.603333 24.08333333 36.96666667 0.010104124 0.539792388 0.35166817 3 3 3 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 23186637 23186642 - 3R_23186637_23186642_- 0.963356589 0.931829387 0.947592988 0.022293097 cnc FBtr0306755|FBtr0308226|FBtr0330372|FBtr0306744|FBtr0306747|FBtr0308227|FBtr0306752|FBtr0306754|FBtr0306751|FBtr0306749|FBtr0306745|FBtr0306746|FBtr0336455|FBtr0306750|FBtr0306748|FBtr0306753 23185578|23186410|23185578|23185578|23185578|23186410|23186410|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578 23187443|23187443|23187302|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443 3R - 23186607 23186662 3'utr cnc FlyBase G53624.1 TTTACATTTGTAAGCTATATTCTAGTGAAAGATCTACCACAGCGGTGAATAGTTGT 35 23186643 0.945263188 5 35 234 1 1.653212514 0.066666667 0.257142857 0.422222222 35 0 0 45 3R:23186607-23186662 6 cnc FBtr0306751|FBtr0336455|FBtr0306748|FBtr0306746|FBtr0306752|FBtr0306750|FBtr0306754|FBtr0306749|FBtr0306745|FBtr0306753|FBtr0306747|FBtr0308226|FBtr0306744|FBtr0308227|FBtr0306755|FBtr0330372 23185578|23185578|23185578|23185578|23186410|23185578|23185578|23185578|23185578|23185578|23185578|23186410|23185578|23186410|23185578|23185578 23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187302 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R - 23186576 23186684 3'utr cnc FlyBase G40530.1 CATGAATTACGGGCGTAAGACATTTACATTTGTAAGCTATATTCTAGTGAAAGATCTACCACAGCGGTGAATAGTTGTAAATCGTTCTAAACTCATAAGGCATTTATCA 32 23186643 0.979991233 7 31 217 1 1.662757832 0.043478261 0.387096774 0.586956522 31 0 0 46 3R:23186576-23186684 6 28.5 3028 FBgn0262975 1286.603333 24.08333333 36.96666667 0.022151349 1.183391003 0.770964833 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 23187025 23187031 - 3R_23187025_23187031_- 0.695946257 0.690011567 0.692978912 0.004196467 cnc FBtr0306755|FBtr0306755|FBtr0306755|FBtr0308226|FBtr0308226|FBtr0308226|FBtr0330372|FBtr0330372|FBtr0330372|FBtr0306744|FBtr0306744|FBtr0306744|FBtr0306747|FBtr0306747|FBtr0306747|FBtr0308227|FBtr0308227|FBtr0308227|FBtr0306752|FBtr0306752|FBtr0306752|FBtr0306754|FBtr0306754|FBtr0306754|FBtr0306751|FBtr0306751|FBtr0306751|FBtr0306749|FBtr0306749|FBtr0306749|FBtr0306745|FBtr0306745|FBtr0306745|FBtr0306746|FBtr0306746|FBtr0306746|FBtr0336455|FBtr0336455|FBtr0336455|FBtr0306750|FBtr0306750|FBtr0306750|FBtr0306748|FBtr0306748|FBtr0306748|FBtr0306753|FBtr0306753|FBtr0306753 23185578|23185578|23185578|23186410|23186410|23186410|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23186410|23186410|23186410|23186410|23186410|23186410|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578 23187443|23187443|23187443|23187443|23187443|23187443|23187302|23187302|23187302|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443 3R - 23186980 23187085 3'utr cnc FlyBase G53625.1 TGGACAGCGTATGCGAAGCCTTTTACTTAATTGCAATTAATGAAAAACAAAACTTGTGATAAAACAGCTCTTTTACTCCGAAATATTTGCGCCCCAAAGGTCAAGC 77 23187032 0.856437025 8 72 370 0.954022989 1.618048097 0.103448276 0.12987013 0.229885057 77 3 1 83 3R:23186980-23187085 7 cnc FBtr0306751|FBtr0306751|FBtr0306751|FBtr0336455|FBtr0336455|FBtr0336455|FBtr0306748|FBtr0306748|FBtr0306748|FBtr0306746|FBtr0306746|FBtr0306746|FBtr0306752|FBtr0306752|FBtr0306752|FBtr0306750|FBtr0306750|FBtr0306750|FBtr0306754|FBtr0306754|FBtr0306754|FBtr0306749|FBtr0306749|FBtr0306749|FBtr0306745|FBtr0306745|FBtr0306745|FBtr0306753|FBtr0306753|FBtr0306753|FBtr0306747|FBtr0306747|FBtr0306747|FBtr0308226|FBtr0308226|FBtr0308226|FBtr0306744|FBtr0306744|FBtr0306744|FBtr0308227|FBtr0308227|FBtr0308227|FBtr0306755|FBtr0306755|FBtr0306755|FBtr0330372|FBtr0330372|FBtr0330372 23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23186410|23186410|23186410|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23186410|23186410|23186410|23185578|23185578|23185578|23186410|23186410|23186410|23185578|23185578|23185578|23185578|23185578|23185578 23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187302|23187302|23187302 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 23186975 23187133 3'utr cnc FlyBase G40531.1 TGATTATTTGGACTCGTCCAAGTCCGTCTTGCATGGTGTTGTCCCTTCTGGACAGCGTATGCGAAGCCTTTTACTTAATTGCAATTAATGAAAAACAAAACTTGTGATAAAACAGCTCTTTTACTCCGAAATATTTGCGCCCCAAAGGTCAAGCTGACA 59 23187032 0.966387214 14 57 307 0.975308642 1.596597096 0.098765432 0.322033898 0.50617284 59 1 1 79 3R:23186975-23187133 7 53.5 3029 FBgn0262975 1286.603333 24.08333333 36.96666667 0.041582358 2.221453287 1.447249775 1 1 1 0.15 dme-miR-12-5p 7mer-A1 ATACTCA 3R 23254478 23254484 + 3R_23254478_23254484_+ 0.784468614 0.792495445 0.788482029 0.005675805 EloA FBtr0084374|FBtr0084375 23254447|23254447 23255071|23255071 3R + 23254447 23254564 stop_codon EloA FlyBase G44911.1 AGATGCGCTTACTCATTATAGCTACAATCTTATACTCAACTTCTTCAGCGACAACTTAAGCAGCAGCAGTAGCAGCAACCTCGATCTATTAGGCATTCACGGTGGGATTACCTTCCAA 42 23254476 0.978661593 11 41 287 0.97826087 1.653212514 0.195652174 0.095238095 0.173913043 42 1 0 45 3R:23254447-23254564 7 EloA FBtr0084374|FBtr0084375 23254447|23254447 23255071|23255071 ATACTCA 7mer-A1 dme-miR-12-5p 3R + 23254441 23254565 stop_codon EloA FlyBase G33929.1 AACGATAGATGCGCTTACTCATTATAGCTACAATCTTATACTCAACTTCTTCAGCGACAACTTAAGCAGCAGCAGTAGCAGCAACCTCGATCTATTAGGCATTCACGGTGGGATTACCTTCCAAC 30 23254476 0.982136022 9 27 196 0.916666667 1.166331422 0.125 0.4 0.625 30 2 2 44 3R:23254441-23254565 7 20 3030 FBgn0039066 571.72 24.26333333 37.16333333 0.034982159 0.824289051 0.538164858 2 2 2 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 23254605 23254611 + 3R_23254605_23254611_+ 0.801961112 0.801931158 0.801946135 2.11E-05 EloA FBtr0084374|FBtr0084374|FBtr0084374|FBtr0084375|FBtr0084375|FBtr0084375 23254447|23254447|23254447|23254447|23254447|23254447 23255071|23255071|23255071|23255071|23255071|23255071 3R + 23254588 23254644 3'utr EloA FlyBase G44912.1 TCTGAATAAAGTGACATTGTGATACTAGACCTTCTACTTCCCAGTGCGCTGTGGAAT 30 23254604 0.652152423 5 28 193 0.918918919 1.054357662 0.135135135 0.133333333 0.297297297 30 1 2 34 3R:23254588-23254644 7 EloA FBtr0084374|FBtr0084374|FBtr0084374|FBtr0084375|FBtr0084375|FBtr0084375 23254447|23254447|23254447|23254447|23254447|23254447 23255071|23255071|23255071|23255071|23255071|23255071 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 23254584 23254634 3'utr EloA FlyBase G33930.1 CAGGTCTGAATAAAGTGACATTGTGATACTAGACCTTCTACTTCCCAGTGC 26 23254604 0.666304242 6 26 170 1 1.62324929 0.095238095 0.384615385 0.619047619 26 0 0 42 3R:23254584-23254634 7 26 3031 FBgn0039066 571.72 24.26333333 37.16333333 0.045476807 1.071575766 0.699614315 1 1 1 0.15 dme-miR-1008-3p 6mer2-7 GCTGTG 3R 23254924 23254929 + 3R_23254924_23254929_+ 0.999999996 0.9166163 0.958308148 0.05896118 EloA FBtr0084374|FBtr0084375 23254447|23254447 23255071|23255071 3R + 23254904 23254967 3'utr EloA FlyBase G44914.1 AATGTTCTTTGTTCAAAAGGGCTGTGCGTATGTCCAAAATCATAGAGGTTCCAAGCTGTATATA 11 23254930 0.978636255 8 10 70 0.928571429 1.113943352 0.428571429 0.272727273 0.428571429 11 1 0 13 3R:23254904-23254967 6 EloA FBtr0084374|FBtr0084375 23254447|23254447 23255071|23255071 GCTGTG 6mer2-7 dme-miR-1008-3p 3R + 23254910 23254935 3'utr EloA FlyBase G33931.1 CTTTGTTCAAAAGGGCTGTGCGTATG 8 23254932 0.708355348 3 7 49 0.909090909 0.698970004 0.272727273 0.25 0.454545455 8 0 1 10 3R:23254910-23254935 6 8.5 3032 FBgn0039066 571.72 24.26333333 37.16333333 0.014867418 0.350322847 0.228720065 -6 -8 -7 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 23255452 23255457 - 3R_23255452_23255457_- 0.994506136 0.999418019 0.996962078 0.003473238 wda FBtr0084387 23255068 23255493 3R - 23255434 23255480 3'utr wda FlyBase G53644.1 AAGTTCAGCCCGAATTTAGACTTTCTAGTGACGACTTATGTTTGAAA 34 23255464 0.691882377 9 33 263 0.951219512 1.113943352 0.195121951 0.205882353 0.341463415 34 0 2 39 3R:23255434-23255480 6 wda FBtr0084387 23255068 23255493 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R - 23255426 23255479 3'utr wda FlyBase G40547.1 AGTTCAGCCCGAATTTAGACTTTCTAGTGACGACTTATGTTTGAAAATAATTTA 18 23255459 0.965605775 6 17 141 0.954545455 1.021189299 0.045454545 0.222222222 0.363636364 18 0 1 21 3R:23255426-23255479 6 26 3033 FBgn0039067 161 7.11 10.86333333 0.161490683 3.656821378 2.3933722 7 2 4.5 0.15 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3R 23263542 23263548 - 3R_23263542_23263548_- 0.620023678 0.620203042 0.62011336 0.000126784 orb FBtr0334498 23260608 23265852 3R - 23263525 23263562 3'utr orb FlyBase G53650.1 TTATACAGATAAAATGGTGCTTTAGCTGAATTATTAGT 15 23263541 0.652886182 3 15 115 1 1.204119983 0.0625 0.066666667 0.125 15 0 0 16 3R:23263525-23263562 7 orb FBtr0334498 23260608 23265852 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3R - 23263527 23263562 3'utr orb FlyBase G40552.1 TTATACAGATAAAATGGTGCTTTAGCTGAATTATTA 10 23263548 0.778724095 3 9 78 0.941176471 1.204119983 0.176470588 0.5 0.705882353 10 1 0 16 3R:23263527-23263562 7 12.5 3034 FBgn0004882 75.63666667 1.15 1.746666667 0.165263761 10.86956522 7.15648855 -7 0 -3.5 0.15 dme-miR-283-5p 8mer-A1 TGATATTA 3R 23290837 23290844 - 3R_23290837_23290844_- 0.583113214 0.592138826 0.58762602 0.006382063 pnt FBtr0334554|FBtr0089717 23290229|23290229 23291364|23291364 3R - 23290818 23290890 3'utr pnt FlyBase G53659.1 AGGATCGAACGTTGATAGAGGCCATAAAGCATGTGTCCCCCAAAAGTGATATTAGAGCGCAACATTTTGTTAT 51 23290839 0.96504244 9 49 258 0.931034483 1.255272505 0.24137931 0.137254902 0.24137931 51 2 2 54 3R:23290818-23290890 8 pnt FBtr0334554|FBtr0089717 23290229|23290229 23291364|23291364 TGATATTA 8mer-A1 dme-miR-283-5p 3R - 23290825 23290893 3'utr pnt FlyBase G40556.1 GCAAGGATCGAACGTTGATAGAGGCCATAAAGCATGTGTCCCCCAAAAGTGATATTAGAGCGCAACATT 29 23290839 0.913230742 9 26 142 0.894736842 1.531478917 0.184210526 0.24137931 0.421052632 29 4 0 34 3R:23290825-23290893 8 33.5 3035 FBgn0003118 3507.63 110.36 169.3033333 0.009550608 0.303552012 0.197869701 -5 -5 -5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 23605903 23605908 - 3R_23605903_23605908_- 0.99951638 0.999638568 0.999577474 8.64E-05 CG31145 FBtr0290056|FBtr0336459 23605749|23605749 23606850|23606850 3R - 23605824 23605930 3'utr CG31145 FlyBase G53713.1 ATTATTGTAACGTTTTTCAATTGTACCTTGAGTGGTTGAGATAGAGATCATTGATTGGCCAAGAAAAGAAAAAGTGACAGGTGAATTGAGTGTGAAAACTATGAGAA 123 23605909 0.824246802 19 117 1115 0.953642384 2.158362492 0.21192053 0.195121951 0.344370861 123 7 0 144 3R:23605824-23605930 6 CG31145 FBtr0336459|FBtr0290056 23605749|23605749 23606850|23606850 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 23605873 23605925 3'utr CG31145 FlyBase G40604.1 TGTAACGTTTTTCAATTGTACCTTGAGTGGTTGAGATAGAGATCATTGATTGG 61 23605909 0.792026983 6 58 586 0.947916667 1.959041392 0.239583333 0.409836066 0.625 61 5 0 91 3R:23605873-23605925 6 81 3036 FBgn0051145 14.00333333 0.44 0.683333333 5.784337063 184.0909091 118.5365854 1 1 1 0.15 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 23606086 23606093 - 3R_23606086_23606093_- 0.625311892 0.625323977 0.625317934 8.56E-06 CG31145 FBtr0290056|FBtr0336459 23605749|23605749 23606850|23606850 3R - 23606057 23606154 3'utr CG31145 FlyBase G53715.1 AAGAAAAGTTGTTGCAAGTTTAGTTCGTAAGTTGACCTAACATTATGATCGATATCAGGCGTAGCTTTATCCGATTCAAGGATCGTCTTATTAGTTAG 25 23606109 0.991081207 11 21 218 0.870967742 1.431363764 0.161290323 0.2 0.35483871 25 4 0 27 3R:23606057-23606154 8 CG31145 FBtr0336459|FBtr0290056 23605749|23605749 23606850|23606850 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R - 23606058 23606137 3'utr CG31145 FlyBase G40606.1 GTTTAGTTCGTAAGTTGACCTAACATTATGATCGATATCAGGCGTAGCTTTATCCGATTCAAGGATCGTCTTATTAGTTA 17 23606088 0.88962346 11 16 122 0.875 1.322219295 0.416666667 0.352941176 0.541666667 17 3 0 21 3R:23606058-23606137 8 10 3037 FBgn0051145 14.00333333 0.44 0.683333333 0.714115687 22.72727273 14.63414634 16 -5 5.5 0.15 dme-miR-190-5p 6mer3-8 ACATAT 3R 23606215 23606220 - 3R_23606215_23606220_- 0.999921828 0.99615129 0.998036559 0.002666146 CG31145 FBtr0290056|FBtr0336459 23605749|23605749 23606850|23606850 3R - 23606200 23606240 3'utr CG31145 FlyBase G53716.1 GCATACATTTTATGACTTTTACATATACACTTTTGCATACA 20 23606222 0.722443994 6 18 196 0.888888889 1.380211242 0.037037037 0.25 0.444444444 20 3 0 24 3R:23606200-23606240 6 CG31145 FBtr0336459|FBtr0290056 23605749|23605749 23606850|23606850 ACATAT 6mer3-8 dme-miR-190-5p 3R - 23606206 23606234 3'utr CG31145 FlyBase G40607.1 ATTTTATGACTTTTACATATACACTTTTG 11 23606222 0.757130274 2 11 112 1 1.146128036 0 0.272727273 0.428571429 11 0 0 14 3R:23606206-23606234 6 15.5 3038 FBgn0051145 14.00333333 0.44 0.683333333 1.106879314 35.22727273 22.68292683 2 2 2 0.15 dme-miR-318-3p 8mer-A1 CCCAGTGA 3R 23712878 23712885 - 3R_23712878_23712885_- 0.677953361 0.677806305 0.677879833 0.000104015 nau FBtr0301445|FBtr0084472 23712812|23712812 23712945|23712945 3R - 23712822 23712919 3'utr nau FlyBase G53743.1 TTGTAAAGCTATTTTTAAGAGGATACACGAGATACCCAGTGACCCGAATAGGCCTTAAATTATTTGTATAGCATTAGAACTTAATTAAATGGTAATTC 48 23712880 0.948735073 10 48 213 1 1.73239376 0.37037037 0.083333333 0.185185185 48 0 0 54 3R:23712822-23712919 8 nau FBtr0301445|FBtr0084472 23712812|23712812 23712945|23712945 CCCAGTGA 8mer-A1 dme-miR-318-3p 3R - 23712859 23712903 3'utr nau FlyBase G40621.1 AAGAGGATACACGAGATACCCAGTGACCCGAATAGGCCTTAAATT 30 23712880 0.958694621 3 30 94 1 1.62324929 0.547619048 0.333333333 0.523809524 30 0 0 42 3R:23712859-23712903 8 35 3039 FBgn0002922 0 0 0 Inf Inf Inf -5 -5 -5 0.15 dme-miR-965-3p 7mer-m8 TACGCTT 3R 23751032 23751038 - 3R_23751032_23751038_- 0.615019743 0.569886726 0.592453235 0.03191385 RanBP3 FBtr0084468|FBtr0335003 23750935|23750935 23751241|23751241 3R - 23751016 23751096 3'utr RanBP3 FlyBase G53777.1 TAAATGAAGTGCTGATTTGTAAACCCGTGAGCAGCGTCGACAAAAGACATTTATCCATTACGCTTTGTGTTTATAATTTTT 43 23751039 0.816579694 9 42 443 0.97826087 1.653212514 0.130434783 0.069767442 0.130434783 43 1 0 45 3R:23751016-23751096 7 RanBP3 FBtr0084468|FBtr0335003 23750935|23750935 23751241|23751241 TACGCTT 7mer-m8 dme-miR-965-3p 3R - 23751010 23751053 3'utr RanBP3 FlyBase G40651.1 AAGACATTTATCCATTACGCTTTGTGTTTATAATTTTTTGTTAA 31 23751039 0.806933956 6 30 375 0.975609756 1.602059991 0.048780488 0.258064516 0.43902439 31 1 0 40 3R:23751010-23751053 7 33 3040 FBgn0039110 582.3333333 40.28333333 61.80666667 0.056668575 0.819197352 0.533922986 1 1 1 0.15 dme-miR-277-3p 6mer3-8 TGCATT 3R 23766619 23766624 - 3R_23766619_23766624_- 0.708157682 0.923437693 0.815797688 0.152225948 CG10214 FBtr0084463 23766517 23766762 3R - 23766606 23766658 3'utr CG10214 FlyBase G53807.1 TTAAGCGTGAAGTTAGGCTTATATTATTGACAAATGCATTATGTTAAAAATAG 7 23766621 0.772515822 4 7 58 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 3R:23766606-23766658 6 CG10214 FBtr0084463 23766517 23766762 TGCATT 6mer3-8 dme-miR-277-3p 3R - 23766605 23766647 3'utr CG10214 FlyBase G40674.1 GTTAGGCTTATATTATTGACAAATGCATTATGTTAAAAATAGA 6 23766620 0.975642283 3 6 51 1 1 0.2 0.5 0.7 6 0 0 10 3R:23766605-23766647 6 5 3041 FBgn0039115 91.23333333 11.91333333 18.33 0.054804531 0.419697818 0.272776869 -3 -4 -3.5 0.15 dme-miR-263a-5p 6mer3-8 GTGCCA 3R 23800840 23800845 + 3R_23800840_23800845_+ 0.924961642 0.999999964 0.962480803 0.053060161 mbc FBtr0304729|FBtr0084459 23800770|23800770 23801634|23801634 3R + 23800757 23800851 stop_codon mbc FlyBase G45059.1 AAACACATTCCATAGGGTAGCGAGGGGCATCTTTGAACCCCAGAAGCTTCAGTGCAGCGCCATATATGTTCAAACGTTGTCGAGTGCCAAATATT 16 23800841 0.90357433 8 15 67 0.944444444 1.230448921 0.222222222 0.125 0.222222222 16 1 0 17 3R:23800757-23800851 6 mbc FBtr0304729|FBtr0084459 23800770|23800770 23801634|23801634 GTGCCA 6mer3-8 dme-miR-263a-5p 3R + 23800790 23800857 3'utr mbc FlyBase G34027.1 TGAACCCCAGAAGCTTCAGTGCAGCGCCATATATGTTCAAACGTTGTCGAGTGCCAAATATTCCTGTT 10 23800841 0.974542709 5 9 63 0.9375 1.176091259 0.125 0.5 0.6875 10 1 0 15 3R:23800790-23800857 6 6 3042 FBgn0015513 1872.666667 30.72333333 47.18666667 0.003203987 0.19529131 0.127154563 -1 -1 -1 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 23809228 23809234 - 3R_23809228_23809234_- 0.823259067 0.823268306 0.823263687 6.51E-06 eIF4G2 FBtr0344335 23808283 23810293 3R - 23809202 23809282 5'utr eIF4G2 FlyBase G53863.1 AAAATTCGTAAAGACATGTAAAGTATTTAGCACACAAAGCATGATTATCCAAAGATAAATCTTAAAATTAGCTGTAAAAAG 47 23809238 0.694930987 13 42 273 0.890909091 1.69019608 0.036363636 0.14893617 0.272727273 47 6 0 49 3R:23809202-23809282 7 eIF4G2 FBtr0344335 23808283 23810293 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 23809207 23809270 5'utr eIF4G2 FlyBase G40707.1 GACATGTAAAGTATTTAGCACACAAAGCATGATTATCCAAAGATAAATCTTAAAATTAGCTGTA 23 23809238 0.982911985 8 18 143 0.84375 1.431363764 0.03125 0.304347826 0.5 23 5 0 27 3R:23809207-23809270 7 26 3043 FBgn0260634 1847.216667 30.65 47.06666667 0.01407523 0.848287113 0.552407932 4 4 4 0.15 dme-miR-305-5p 8mer-A1 AGTACAAA 3R 23809542 23809549 - 3R_23809542_23809549_- 0.605575806 0.605578907 0.605577357 2.19E-06 eIF4G2 FBtr0344335 23808283 23810293 3R - 23809465 23809594 5'utr eIF4G2 FlyBase G53865.1 ATACTTTTCTAGACTTTAAACAGAATTTTGTTTATTTTACCTTTCAGTACAAAGCATTATGAACTTCGTTTTGTTTGATTTTTTATAAAGAACTACCAACATTGATTTACCTATTTTCTATGCGAATGGC 83 23809551 0.987385384 12 80 715 0.970588235 1.694605199 0.029411765 0.192771084 0.343137255 83 2 1 99 3R:23809465-23809594 8 eIF4G2 FBtr0344335 23808283 23810293 AGTACAAA 8mer-A1 dme-miR-305-5p 3R - 23809518 23809592 5'utr eIF4G2 FlyBase G40709.1 ACTTTTCTAGACTTTAAACAGAATTTTGTTTATTTTACCTTTCAGTACAAAGCATTATGAACTTCGTTTTGTTTG 44 23809552 0.988108518 8 40 370 0.918032787 1.447158031 0.016393443 0.295454545 0.491803279 44 4 1 56 3R:23809518-23809592 8 57.5 3044 FBgn0260634 1847.216667 30.65 47.06666667 0.031127913 1.876019576 1.221671388 2 3 2.5 0.15 dme-miR-190-5p 6mer3-8 ACATAT 3R 23809684 23809689 - 3R_23809684_23809689_- 0.999904043 0.997793251 0.998848647 0.00149249 eIF4G2 FBtr0344335 23808283 23810293 3R - 23809634 23809802 5'utr eIF4G2 FlyBase G53866.1 GCAAAACTATGTAAAACTGAACCTACGATGCCGAAAAATATTTTGAAGAAATCAAATTCTGACAATGCCTTACCCAATGTGAACTGGGTATAGAAATATATTTATGTATATTTACATATGGACTATTAATTTTTGTAAACTCACAGTATTTCGTTAAACATTAAAATTA 126 23809684 0.919760887 28 119 1100 0.947712418 1.684246748 0.104575163 0.174603175 0.320261438 126 6 2 145 3R:23809634-23809802 6 eIF4G2 FBtr0344335 23808283 23810293 ACATAT 6mer3-8 dme-miR-190-5p 3R - 23809635 23809708 5'utr eIF4G2 FlyBase G40710.1 AATATATTTATGTATATTTACATATGGACTATTAATTTTTGTAAACTCACAGTATTTCGTTAAACATTAAAATT 54 23809684 0.83319595 10 51 541 0.93902439 1.58546073 0.048780488 0.462962963 0.646341463 54 4 1 77 3R:23809635-23809708 6 57.5 3045 FBgn0260634 1847.216667 30.65 47.06666667 0.031127913 1.876019576 1.221671388 -5 -5 -5 0.15 dme-miR-252-5p 6mer3-8 GTACTT 3R 23926479 23926484 - 3R_23926479_23926484_- 0.999996745 0.999942196 0.999969471 3.85E-05 CG13601 FBtr0084522|FBtr0330369 23926370|23926370 23926628|23926562 3R - 23926478 23926590 stop_codon CG13601 FlyBase G53920.1 GATGGCAGTGGCGATGGAGGAACAGTAAGGCCGCCCGCTTGTACACATTCAACCTGCAGACCATTTCATCAGTGCTAGTTATGATCAAATCGCGTGTTACCATTTCGTACTTT 16 23926495 0.948123452 10 15 96 0.95 0.977723605 0.2 0.125 0.3 16 0 1 19 3R:23926478-23926590 6 CG13601 FBtr0330369|FBtr0084522 23926370|23926370 23926562|23926628 GTACTT 6mer3-8 dme-miR-252-5p 3R - 23926473 23926533 3'utr CG13601 FlyBase G40741.1 AGACCATTTCATCAGTGCTAGTTATGATCAAATCGCGTGTTACCATTTCGTACTTTAAGTA 12 23926509 0.718262507 7 11 91 0.947368421 1.255272505 0.052631579 0.5 0.684210526 12 1 0 18 3R:23926473-23926533 6 3 3046 FBgn0039126 158.33 17.96666667 27.49333333 0.018947767 0.166975881 0.109117362 11 25 18 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 3R 23936062 23936068 - 3R_23936062_23936068_- 0.618460182 0.612064138 0.61526216 0.004522726 Gdh FBtr0089497|FBtr0335205|FBtr0089498|FBtr0089496 23935956|23935956|23935956|23935956 23936373|23936373|23936373|23936373 3R - 23935999 23936144 3'utr Gdh FlyBase G53934.1 AAGTTGAACAAGTTGCGAGCTTATTATTGTTGATTTTCTGTAATTTTTAAGTTAATGAGCGTCAAAGTGAAGCAATTGCATTTTCAATTATGTATCGCAACGTCTCGTACCGTCAAGTCACGTTTATCGTACGATCGCTCCGTTGC 51 23936069 0.989068525 16 47 447 0.935483871 1.286306739 0.403225806 0.156862745 0.306451613 51 2 2 58 3R:23935999-23936144 7 Gdh FBtr0089498|FBtr0089496|FBtr0089497|FBtr0335205 23935956|23935956|23935956|23935956 23936373|23936373|23936373|23936373 TGCATTT 7mer-m8 dme-miR-277-3p 3R - 23936035 23936091 3'utr Gdh FlyBase G40748.1 AATGAGCGTCAAAGTGAAGCAATTGCATTTTCAATTATGTATCGCAACGTCTCGTAC 14 23936069 0.987019837 3 11 103 0.714285714 0.875061263 0 0.428571429 0.619047619 14 5 1 15 3R:23936035-23936091 7 13 3047 FBgn0001098 137.9033333 7.62 11.54666667 0.094268932 1.706036745 1.125866051 1 1 1 0.15 dme-miR-1007-3p 7mer-A1 GAGCTTA 3R 23936122 23936128 - 3R_23936122_23936128_- 0.820809273 0.823347549 0.822078411 0.001794778 Gdh FBtr0089497|FBtr0335205|FBtr0089498|FBtr0089496 23935956|23935956|23935956|23935956 23936373|23936373|23936373|23936373 3R - 23935999 23936144 3'utr Gdh FlyBase G53934.1 AAGTTGAACAAGTTGCGAGCTTATTATTGTTGATTTTCTGTAATTTTTAAGTTAATGAGCGTCAAAGTGAAGCAATTGCATTTTCAATTATGTATCGCAACGTCTCGTACCGTCAAGTCACGTTTATCGTACGATCGCTCCGTTGC 51 23936118 0.989068525 16 47 447 0.935483871 1.286306739 0.403225806 0.156862745 0.306451613 51 2 2 58 3R:23935999-23936144 7 Gdh FBtr0089498|FBtr0089496|FBtr0089497|FBtr0335205 23935956|23935956|23935956|23935956 23936373|23936373|23936373|23936373 GAGCTTA 7mer-A1 dme-miR-1007-3p 3R - 23936107 23936172 3'utr Gdh FlyBase G40749.1 AAGCGAACTTTCGCCCGTGTTTCGTATTAAGTTGAACAAGTTGCGAGCTTATTATTGTTGATTTTC 17 23936118 0.811802963 5 16 152 0.903225806 1.447158031 0.322580645 0.529411765 0.741935484 17 3 0 28 3R:23936107-23936172 7 17 3048 FBgn0001098 137.9033333 7.62 11.54666667 0.123274758 2.230971129 1.472286374 -10 -10 -10 0.15 dme-miR-999-3p 6mer3-8 AGTTAA 3R 23936329 23936334 - 3R_23936329_23936334_- 0.999807142 0.999780414 0.999793778 1.89E-05 Gdh FBtr0089497|FBtr0335205|FBtr0089498|FBtr0089496 23935956|23935956|23935956|23935956 23936373|23936373|23936373|23936373 3R - 23936267 23936449 stop_codon Gdh FlyBase G53936.1 CCTCAGAACCGCTGCCTACGTCAACTCCATTGAGAAGATCTTCACCACATACCGCGATGCCGGCCTGGCCTTCTAAGCCCGCTGAGTGTGCTGATTAGCCCCCAGACTCTTAACTAGTTAATTAAGCAATCGAACTCAAGAGCATAACTATTGCTATTGCTCCATGCACCGCCGTCTTAGATG 63 23936339 0.956534762 19 63 321 1 1.86332286 0.123287671 0.126984127 0.246575342 63 0 0 73 3R:23936267-23936449 6 Gdh FBtr0089498|FBtr0089496|FBtr0089497|FBtr0335205 23935956|23935956|23935956|23935956 23936373|23936373|23936373|23936373 AGTTAA 6mer3-8 dme-miR-999-3p 3R - 23936310 23936410 stop_codon Gdh FlyBase G40751.1 CTTCACCACATACCGCGATGCCGGCCTGGCCTTCTAAGCCCGCTGAGTGTGCTGATTAGCCCCCAGACTCTTAACTAGTTAATTAAGCAATCGAACTCAAG 29 23936356 0.969188146 12 26 144 0.960784314 1.69019608 0.117647059 0.482758621 0.705882353 29 2 0 49 3R:23936310-23936410 6 15.5 3049 FBgn0001098 137.9033333 7.62 11.54666667 0.112397573 2.034120735 1.342378753 5 22 13.5 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3R 23961085 23961091 + 3R_23961085_23961091_+ 0.518415203 0.521204211 0.519809707 0.001972121 AP-1sigma FBtr0305039 23960941 23961504 3R + 23961048 23961166 5'utr AP-1sigma FlyBase G45096.1 TTTACAGCACTGCTCCATCCACTCCTCAACACTAGTGTGTGATTTGGCTGTTGTACAGCACTGAAGCGCTGAAAAAAAAATTATAAGCAAGAAGACGCCAAGCAGCGTGAGGCTCCAAA 23 23961091 0.999506114 8 22 171 0.961538462 1.096910013 0.230769231 0.086956522 0.192307692 23 0 1 25 3R:23961048-23961166 7 AP-1sigma FBtr0305040|FBtr0305039 23960941|23960941 23961118|23961504 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 23961064 23961110 5'utr AP-1sigma FlyBase G34061.1 ATCCACTCCTCAACACTAGTGTGTGATTTGGCTGTTGTACAGCACTG 15 23961091 0.699287916 4 14 144 0.904761905 0.801632346 0.523809524 0.4 0.571428571 15 0 2 19 3R:23961064-23961110 7 14.5 3050 FBgn0039132 832.4666667 93.19333333 142.7733333 0.017418115 0.155590529 0.101559582 -6 -6 -6 0.15 dme-miR-79-3p 7mer-A1 AGCTTTA 3R 23961445 23961451 + 3R_23961445_23961451_+ 0.82299943 0.819899233 0.821449331 0.002192172 AP-1sigma FBtr0305039 23960941 23961504 3R + 23961369 23961464 3'utr AP-1sigma FlyBase G45097.1 AATCAATCACCAAATGGGCAATAACTAATTTAGTGGGGAAATATATGCAATACTATTCTTACAATAGAAACATGTAAGCTTTAATGTTGATTAAAT 23 23961443 0.986945063 6 22 158 0.962962963 1.414973348 0.259259259 0.173913043 0.296296296 23 1 0 26 3R:23961369-23961464 7 AP-1sigma FBtr0305039 23960941 23961504 AGCTTTA 7mer-A1 dme-miR-79-3p 3R + 23961430 23961464 3'utr AP-1sigma FlyBase G34062.2 CAATAGAAACATGTAAGCTTTAATGTTGATTAAAT 20 23961443 0.792994006 5 19 137 0.933333333 1.447158031 0.433333333 0.5 0.666666667 20 2 0 28 3R:23961430-23961464 7 18 3051 FBgn0039132 832.4666667 93.19333333 142.7733333 0.021622487 0.193146863 0.126073963 2 2 2 0.15 dme-miR-283-5p 6mer3-8 TGATAT 3R 23985283 23985288 - 3R_23985283_23985288_- 0.974470248 0.996136811 0.985303529 0.0153206 CG13603 FBtr0084510 23985211 23985472 3R - 23985262 23985402 3'utr CG13603 FlyBase G53976.1 TTGTATGTCATTTCGTCCTCGTCCTTATCATTGAGGCAGACAACCGGCAACACACATTATCTTTGTAGTGAAGGAAACTAGAGATATTAGCCCTATGTATTAAGCCAACATACGTGATATGTAATGTATATATATATATAT 243 23985292 0.9453854 18 232 1175 0.956140351 1.815577748 0.023391813 0.271604938 0.48245614 243 11 4 327 3R:23985262-23985402 6 CG13603 FBtr0084510 23985211 23985472 TGATAT 6mer3-8 dme-miR-283-5p 3R - 23985268 23985321 3'utr CG13603 FlyBase G40779.1 AGATATTAGCCCTATGTATTAAGCCAACATACGTGATATGTAATGTATATATAT 167 23985292 0.889342987 12 161 764 0.960854093 2.431363764 0.039145907 0.431137725 0.661921708 167 11 0 270 3R:23985268-23985321 6 194.5 3052 FBgn0039135 277 32.77 49.89333333 0.702166065 5.935306683 3.898316408 4 4 4 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 23985459 23985464 - 3R_23985459_23985464_- 0.998764567 0.997924103 0.998344335 0.000594323 CG13603 FBtr0084510|FBtr0084510|FBtr0084510 23985211|23985211|23985211 23985472|23985472|23985472 3R - 23985404 23985481 stop_codon CG13603 FlyBase G53977.1 AACAAATAGTTGACGTTTGTGATCAATCAGCAGCAGTTTGTAATTCTCTACGTATTTCTCATCATGTGCGTTATAATC 62 23985465 0.984361879 11 57 454 0.9 1.857332496 0.1375 0.225806452 0.4 62 8 0 72 3R:23985404-23985481 6 CG13603 FBtr0084510|FBtr0084510|FBtr0084510 23985211|23985211|23985211 23985472|23985472|23985472 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 23985354 23985483 stop_codon CG13603 FlyBase G40780.1 AGAACAAATAGTTGACGTTTGTGATCAATCAGCAGCAGTTTGTAATTCTCTACGTATTTCTCATCATGTGCGTTATAATCATTGTATGTCATTTCGTCCTCGTCCTTATCATTGAGGCAGACAACCGGCA 44 23985465 0.98365467 15 42 329 0.941176471 1.204119983 0.044117647 0.477272727 0.661764706 44 1 3 64 3R:23985354-23985483 6 41.5 3053 FBgn0039135 277 32.77 49.89333333 0.149819495 1.266402197 0.831774452 1 1 1 0.15 dme-miR-79-3p 7mer-m8 TAGCTTT 3R 23988236 23988242 + 3R_23988236_23988242_+ 0.617799264 0.529706256 0.57375276 0.062291158 CG5902 FBtr0301165|FBtr0084501|FBtr0084502 23988158|23988158|23988158 23988738|23988738|23988738 3R + 23988152 23988271 stop_codon CG5902 FlyBase G45110.1 AGTGCTAACAATTGGACAGGACGGCGGCGAGGCGATGATCCTGGCTTAGGGCAGGCCTGATGGCCGTCGTCCTCCTGCTGCTGCTAGCTTTTGAGTTTGGCCCAGCTTGGCGGCCGCTCG 14 23988243 0.979138223 10 14 90 1 1.204119983 0.5 0.071428571 0.1875 14 0 0 16 3R:23988152-23988271 7 CG5902 FBtr0084502|FBtr0301165|FBtr0084501 23988158|23988158|23988158 23988738|23988738|23988738 TAGCTTT 7mer-m8 dme-miR-79-3p 3R + 23988213 23988268 3'utr CG5902 FlyBase G34072.1 GGCCGTCGTCCTCCTGCTGCTGCTAGCTTTTGAGTTTGGCCCAGCTTGGCGGCCGC 7 23988245 0.97353819 5 7 46 1 0.903089987 0.375 0.142857143 0.25 7 0 0 8 3R:23988213-23988268 7 5 3054 FBgn0039136 356.6666667 25.57 39.43333333 0.014018692 0.19554165 0.126796281 -7 -9 -8 0.15 dme-miR-14-3p 7mer-A1 AGACTGA 3R 23989430 23989436 - 3R_23989430_23989436_- 0.822866396 0.822872052 0.822869224 4.03E-06 CG13604 FBtr0113275|FBtr0113276|FBtr0113277|FBtr0084509 23988804|23988804|23988804|23988804 23989471|23989471|23989471|23989471 3R - 23989408 23989452 3'utr CG13604 FlyBase G53982.1 TTCTCTGCAAGCATTGAGACTGAGACTCAACTCGATTGGGACGGA 26 23989438 0.81861698 2 25 128 0.965517241 1.447158031 0.172413793 0.076923077 0.172413793 26 1 0 28 3R:23989408-23989452 7 CG13604 FBtr0084509|FBtr0113277|FBtr0113276|FBtr0113275 23988804|23988804|23988804|23988804 23989471|23989471|23989471|23989471 AGACTGA 7mer-A1 dme-miR-14-3p 3R - 23989392 23989450 3'utr CG13604 FlyBase G40782.1 CTCTGCAAGCATTGAGACTGAGACTCAACTCGATTGGGACGGACCTGGAGGTGAATCAC 11 23989438 0.959921769 2 11 54 1 1.278753601 0.105263158 0.545454545 0.736842105 11 0 0 19 3R:23989392-23989450 7 17.5 3055 FBgn0039137 117.6666667 5.27 8.02 0.148725212 3.320683112 2.182044888 2 2 2 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3R 23995213 23995219 + 3R_23995213_23995219_+ 0.521223855 0.521223852 0.521223854 0 Rab7 FBtr0308612|FBtr0084503|FBtr0308611 23994749|23994749|23994749 23995252|23995452|23995252 3R + 23995150 23995241 3'utr Rab7 FlyBase G45117.1 TGCAACAGAACAGCAACATTGAGAATACAACATCAGAGTATCTTCTAAACAAACAAAAAATCTTGTGATTGTAAATTTAATAAAAGAATAAC 337 23995212 0.988788597 12 310 2912 0.923273657 1.235287907 0.046035806 0.139465875 0.25831202 337 10 20 361 3R:23995150-23995241 7 Rab7 FBtr0308612|FBtr0084503|FBtr0308611 23994749|23994749|23994749 23995252|23995452|23995252 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 23995178 23995245 3'utr Rab7 FlyBase G34078.1 AACATCAGAGTATCTTCTAAACAAACAAAAAATCTTGTGATTGTAAATTTAATAAAAGAATAACTTTT 241 23995219 0.637495373 10 223 2106 0.928571429 1.348026558 0.041666667 0.290456432 0.491071429 241 11 13 312 3R:23995178-23995245 7 281 3056 FBgn0015795 908.47 85 130.1166667 0.30931126 3.305882353 2.159600359 1 -6 -2.5 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3R 23997874 23997880 - 3R_23997874_23997880_- 0.379855754 0.382628443 0.381242098 0.001960524 KrT95D FBtr0084507|FBtr0084508 23997536|23997536 23998637|23998637 3R - 23997866 23997920 3'utr KrT95D FlyBase G53984.1 TCTACCATATATACAAAACCATGTGTACTACTCTTATTGTTGTGATTTTTGAAAT 87 23997897 0.783029589 11 85 756 0.98245614 2.049218023 0.01754386 0.229885057 0.412280702 87 2 0 112 3R:23997866-23997920 7 KrT95D FBtr0084507|FBtr0084508 23997536|23997536 23998637|23998637 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 23997869 23997915 3'utr KrT95D FlyBase G40783.1 CATATATACAAAACCATGTGTACTACTCTTATTGTTGTGATTTTTGA 75 23997897 0.815281468 9 74 623 0.991935484 2.089905111 0 0.466666667 0.677419355 75 1 0 123 3R:23997869-23997915 7 29.5 3057 FBgn0020647 1157.06 25.70333333 39.3 0.025495653 1.147711062 0.750636132 17 17 17 0.15 dme-bantam-3p 8mer-A1 TGATCTCA 3R 23998101 23998108 - 3R_23998101_23998108_- 0.630835912 0.631004429 0.63092017 0.000119147 KrT95D FBtr0084507|FBtr0084508 23997536|23997536 23998637|23998637 3R - 23998055 23998135 3'utr KrT95D FlyBase G53986.1 CCAAGCAATCGGGAGCATTAGGCCCCATGATCTCAAAATCGCCGCTCCCGTTTGGCCAACTATCAAATGAACCTAAAAGTA 92 23998108 0.952704995 10 89 399 0.972477064 1.72427587 0.018348624 0.173913043 0.302752294 92 2 1 106 3R:23998055-23998135 8 KrT95D FBtr0084507|FBtr0084508 23997536|23997536 23998637|23998637 TGATCTCA 8mer-A1 dme-bantam-3p 3R - 23998080 23998133 3'utr KrT95D FlyBase G40785.1 AAGCAATCGGGAGCATTAGGCCCCATGATCTCAAAATCGCCGCTCCCGTTTGGC 63 23998108 0.838644418 5 59 271 0.93814433 1.959041392 0.051546392 0.365079365 0.587628866 63 6 0 91 3R:23998080-23998133 8 73 3058 FBgn0020647 1157.06 25.70333333 39.3 0.063090937 2.84009856 1.857506361 0 0 0 0.15 dme-miR-184-5p 7mer-m8 TGATAAG 3R 24034590 24034596 - 3R_24034590_24034596_- 0.657294211 0.658999276 0.658146743 0.001205688 Miro FBtr0084596|FBtr0084595|FBtr0303849|FBtr0321262 24034360|24034360|24034360|24034360 24034893|24034893|24034893|24034893 3R - 24034590 24034657 3'utr Miro FlyBase G54009.1 GAGCACATTGTGTACGCTGCATTTCTAATCGTATATTAACTTACATAAACCATGTTCTCTCTGATAAG 24 24034605 0.75765264 9 21 172 0.90625 1.462397998 0.125 0.291666667 0.46875 24 3 0 29 3R:24034590-24034657 6 Miro FBtr0084596|FBtr0084595|FBtr0303849|FBtr0321262 24034360|24034360|24034360|24034360 24034893|24034893|24034893|24034893 TGATAAG 7mer-m8 dme-miR-184-5p 3R - 24034556 24034687 3'utr Miro FlyBase G40799.1 GCAGGAATTGGGCTGGAGCAGTGGCCAGTCGAGCACATTGTGTACGCTGCATTTCTAATCGTATATTAACTTACATAAACCATGTTCTCTCTGATAAGTCAAATAAGCTATTGTTACCAGCATATTCGAGTA 14 24034598 0.987621698 9 14 114 1 1.361727836 0.043478261 0.357142857 0.608695652 14 0 0 23 3R:24034556-24034687 7 11.5 3059 FBgn0039140 543 24.22 36.88333333 0.021178637 0.474814203 0.311793945 9 2 5.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 24042416 24042421 + 3R_24042416_24042421_+ 0.997801292 0.999388384 0.998594838 0.001122249 spas FBtr0084533|FBtr0346099 24041623|24041623 24042654|24042982 3R + 24042365 24042445 3'utr spas FlyBase G45135.1 TACAATCGTCTCCGATTCACCTATATTATTAGTAACACACCCAAAAATGTTGTACCTAGCAGGTGCGTATGGATCTGGTGT 54 24042415 0.982767264 7 52 397 0.967213115 1.770852012 0.508196721 0.111111111 0.213114754 54 2 0 59 3R:24042365-24042445 6 spas FBtr0084533|FBtr0346099 24041623|24041623 24042654|24042982 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 24042394 24042442 3'utr spas FlyBase G34092.1 TAGTAACACACCCAAAAATGTTGTACCTAGCAGGTGCGTATGGATCTGG 41 24042415 0.711728743 6 33 257 0.793650794 1.397940009 0.507936508 0.341463415 0.571428571 41 12 1 50 3R:24042394-24042442 6 44 3060 FBgn0039141 308.9966667 10.26 15.68 0.142396358 4.288499025 2.806122449 1 1 1 0.15 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3R 24042549 24042554 + 3R_24042549_24042554_+ 0.643919259 0.776148324 0.710033791 0.093500023 spas FBtr0084533|FBtr0346099 24041623|24041623 24042654|24042982 3R + 24042505 24042570 3'utr spas FlyBase G45137.1 TTGAACCAGCTTCAACGCAGCTCGCCCACCCGGAATTTGAGTTCTTTGACTAGTTACTAAACACAG 11 24042541 0.973387977 6 10 62 0.923076923 1.079181246 0.461538462 0.181818182 0.307692308 11 1 0 12 3R:24042505-24042570 6 spas FBtr0084533|FBtr0346099 24041623|24041623 24042654|24042982 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3R + 24042517 24042554 3'utr spas FlyBase G34093.1 CAACGCAGCTCGCCCACCCGGAATTTGAGTTCTTTGAC 5 24042542 0.977658869 4 4 28 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:24042517-24042554 6 4 3061 FBgn0039141 308.9966667 10.26 15.68 0.012945123 0.389863548 0.255102041 8 7 7.5 0.15 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 24043528 24043533 - 3R_24043528_24043533_- 0.999969745 0.999512721 0.999741233 0.000323148 Rox8 FBtr0333201|FBtr0084594|FBtr0333202|FBtr0333200|FBtr0084592|FBtr0084591 24043054|24043054|24043054|24043054|24043054|24043054 24043963|24043963|24043963|24043963|24043963|24043963 3R - 24043511 24043633 3'utr Rox8 FlyBase G54026.1 AGTCGAACGTTAAGGCGGTGCGTGGAGCTCAACTTCAAGTGATCCACGCCGGCGACAACTGAAAGAACATCAATTGAAAAGCTCCGGGCGATGGGCGGGTAGCTGTAACAATCTAATCCAATC 28 24043542 0.924746377 11 26 94 0.967741935 1.477121255 0.064516129 0.107142857 0.193548387 28 1 0 30 3R:24043511-24043633 6 Rox8 FBtr0333202|FBtr0333200|FBtr0084592|FBtr0084591|FBtr0333201|FBtr0084594 24043054|24043054|24043054|24043054|24043054|24043054 24043963|24043963|24043963|24043963|24043963|24043963 AGCTGT 6mer3-8 dme-miR-1008-3p 3R - 24043500 24043560 3'utr Rox8 FlyBase G40812.1 TTGAAAAGCTCCGGGCGATGGGCGGGTAGCTGTAACAATCTAATCCAATCTAAGTACGTGT 10 24043542 0.941254379 5 9 39 0.823529412 1.146128036 0.117647059 0.5 0.705882353 10 3 0 14 3R:24043500-24043560 6 7.5 3062 FBgn0005649 2598.78 95.18666667 146.0933333 0.00288597 0.078792548 0.051337045 9 9 9 0.15 dme-miR-263a-5p 7mer-m1 TGCCATT 3R 24053535 24053541 + 3R_24053535_24053541_+ 0.76541001 0.765501905 0.765455958 6.50E-05 CG5991 FBtr0084538|FBtr0084536|FBtr0084537 24053389|24053389|24053389 24053592|24053592|24053592 3R + 24053391 24053558 3'utr CG5991 FlyBase G45154.1 AAATGGGAGCCACAATTATGTACCGAATCAGTGCAAAGTCCTGTCCCCCAACTGCTCAGATCACTTGTTGTATTAGCATTAGACGCTCGTGTCCTAGGCAAATGTATTTTGTGAACATCCTGCGAAGCTAACTCTGTGTATTGTTGCCATTTCAGTAGTTTTAAGCTA 354 24053531 0.965449348 30 335 2437 0.940047962 1.894316063 0.230215827 0.149717514 0.278177458 354 21 4 392 3R:24053391-24053558 7 CG5991 FBtr0084536|FBtr0084537|FBtr0084538 24053389|24053389|24053389 24053592|24053592|24053592 TGCCATT 7mer-m1 dme-miR-263a-5p 3R + 24053465 24053569 3'utr CG5991 FlyBase G34106.1 AGCATTAGACGCTCGTGTCCTAGGCAAATGTATTTTGTGAACATCCTGCGAAGCTAACTCTGTGTATTGTTGCCATTTCAGTAGTTTTAAGCTATATTTTATACA 174 24053532 0.669943802 16 169 1460 0.971530249 2.436162647 0.434163701 0.408045977 0.633451957 174 8 0 273 3R:24053465-24053569 7 131 3063 FBgn0026576 379.7933333 22.07666667 33.86 0.344924433 5.933866828 3.868871825 4 3 3.5 0.15 dme-bantam-3p 8mer-A1 TGATCTCA 3R 24055167 24055174 - 3R_24055167_24055174_- 0.631070941 0.631064762 0.631067851 4.31E-06 Hsp68 FBtr0084589 24055078 24055196 3R - 24055146 24055243 stop_codon Hsp68 FlyBase G54050.1 AGCAAGCTGGCGGTTATAAGGGTCCCACCGTCGAGGAGGTGGACTAATTCAAACGAAGTCCCCCTATATTGATCTCATAACCAAAAATACTCAAATAT 1368 24055175 0.876142772 14 1328 9596 0.971669681 1.952092532 0.177817963 0.159356725 0.306811332 1368 30 17 1612 3R:24055146-24055243 8 Hsp68 FBtr0084589 24055078 24055196 TGATCTCA 8mer-A1 dme-bantam-3p 3R - 24055105 24055193 3'utr Hsp68 FlyBase G40829.1 AAACGAAGTCCCCCTATATTGATCTCATAACCAAAAATACTCAAATATCTAAAAATATAGTTCCAATATGCTATTAAATAGTATTAATA 663 24055175 0.678258466 13 636 4675 0.962151394 1.984977126 0.156374502 0.34841629 0.569721116 663 29 9 966 3R:24055105-24055193 8 1005 3064 FBgn0001230 388.3333333 20.75333333 31.29666667 2.587982833 48.42595567 32.11204601 1 1 1 0.15 dme-miR-11-3p 7mer-m1 TGTGATG 3R 24067400 24067406 - 3R_24067400_24067406_- 0.535593563 0.535593562 0.535593563 0 4EHP FBtr0300475|FBtr0303159 24067364|24064475 24101797|24068001 3R - 24067385 24067426 3'utr 4EHP FlyBase G54063.1 TTAATTAGTAATTATTATAATGTGATGTTATATATATAAATC 35 24067410 0.651195498 9 33 393 0.973684211 1.568201724 0.052631579 0.085714286 0.157894737 35 1 0 37 3R:24067385-24067426 7 4EHP FBtr0300475|FBtr0303159 24067364|24064475 24101797|24068001 TGTGATG 7mer-m1 dme-miR-11-3p 3R - 24067384 24067426 3'utr 4EHP FlyBase G40836.1 TTAATTAGTAATTATTATAATGTGATGTTATATATATAAATCA 34 24067399 0.652942345 7 31 396 0.913043478 1.62324929 0 0.294117647 0.47826087 34 4 0 42 3R:24067384-24067426 7 34 3065 FBgn0053100 1050.1 50.24 77.18 0.032377869 0.676751592 0.440528634 4 -7 -1.5 0.15 dme-miR-2535b-3p 8mer-A1 CCGTGAGA 3R 24167711 24167718 - 3R_24167711_24167718_- 0.640762436 0.64174611 0.641254273 0.000695581 CG5510 FBtr0084576 24167673 24167937 3R - 24167692 24167739 3'utr CG5510 FlyBase G54112.1 TGAACTATAGGAAAATTGAGACCGTGAGAATATTATTGCGTAGACAAG 18 24167723 0.760100224 6 17 89 0.958333333 1.361727836 0.125 0.333333333 0.5 18 1 0 23 3R:24167692-24167739 8 CG5510 FBtr0084576 24167673 24167937 CCGTGAGA 8mer-A1 dme-miR-2535b-3p 3R - 24167695 24167734 3'utr CG5510 FlyBase G40868.1 TATAGGAAAATTGAGACCGTGAGAATATTATTGCGTAGAC 6 24167715 0.937340613 3 5 32 0.857142857 0.77815125 0.142857143 0.166666667 0.285714286 6 1 0 6 3R:24167695-24167734 8 11.5 3066 FBgn0039160 449.3066667 40.31666667 61.58 0.025594991 0.285241835 0.186748944 5 -3 1 0.15 dme-miR-317-5p 8mer-A1 GTATCCCA 3R 24167839 24167846 - 3R_24167839_24167846_- 0.675141649 0.673608932 0.67437529 0.001083783 CG5510 FBtr0084576 24167673 24167937 3R - 24167823 24167948 stop_codon CG5510 FlyBase G54113.1 GTTTCTACTGAGCTCTCTAGCTAGTTCATCACAGTAGCATCATGTTAGGAGTTACCCGGACCTCAGTTGATCGCAACTTTTATTTATATTTATACCGCGACTGTATCCCATTTCTTATCACCCTTT 60 24167845 0.936914751 17 56 395 0.940298507 1.498310554 0.119402985 0.116666667 0.208955224 60 3 1 63 3R:24167823-24167948 8 CG5510 FBtr0084576 24167673 24167937 GTATCCCA 8mer-A1 dme-miR-317-5p 3R - 24167808 24167867 3'utr CG5510 FlyBase G40869.1 ATTTATATTTATACCGCGACTGTATCCCATTTCTTATCACCCTTTTTAGTTTCCTTAATT 15 24167845 0.982028415 6 15 118 1 1.380211242 0.041666667 0.4 0.625 15 0 0 24 3R:24167808-24167867 8 20 3067 FBgn0039160 449.3066667 40.31666667 61.58 0.044513027 0.496072757 0.324780773 -1 -1 -1 0.15 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3R 24248459 24248464 + 3R_24248459_24248464_+ 0.986508788 0.998440904 0.992474846 0.008437269 mask FBtr0345261|FBtr0084562|FBtr0334942|FBtr0305043|FBtr0334943|FBtr0084563 24248013|24248013|24248013|24248013|24248013|24248013 24250248|24250248|24250248|24250248|24250248|24248853 3R + 24248448 24248490 3'utr mask FlyBase G45299.1 ATGTTTGAAACTGGTGCCCAGGCAACTGGGTCCAATATATATT 15 24248462 0.860838539 3 14 61 0.9375 1.176091259 0.0625 0.066666667 0.125 15 1 0 15 3R:24248448-24248490 6 mask FBtr0334942|FBtr0305043|FBtr0334943|FBtr0084563|FBtr0345261|FBtr0084562 24248013|24248013|24248013|24248013|24248013|24248013 24250248|24250248|24250248|24248853|24250248|24250248 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3R + 24248446 24248493 3'utr mask FlyBase G34195.1 ACATGTTTGAAACTGGTGCCCAGGCAACTGGGTCCAATATATATTATT 8 24248462 0.971071257 4 7 40 1 1 0 0.428571429 0.6 7 0 0 10 3R:24248446-24248493 6 10.5 3068 FBgn0043884 5250.546667 44.06333333 67.82333333 0.001999792 0.238293366 0.154813977 -3 -3 -3 0.15 dme-miR-970-3p 8mer-A1 TCTTATGA 3R 24248707 24248714 + 3R_24248707_24248714_+ 0.630790218 0.630790218 0.630790218 0 mask FBtr0345261|FBtr0084562|FBtr0334942|FBtr0305043|FBtr0334943|FBtr0084563 24248013|24248013|24248013|24248013|24248013|24248013 24250248|24250248|24250248|24250248|24250248|24248853 3R + 24248650 24248724 3'utr mask FlyBase G45302.1 ACACAAACCCACACACCCGCATATACACAAATACATTTACGTTAGGATAAAAGTCAGTCTTATGAATGAAACATT 21 24248707 0.972439039 9 20 120 0.916666667 1.342422681 0.125 0.142857143 0.25 21 2 0 22 3R:24248650-24248724 8 mask FBtr0334942|FBtr0305043|FBtr0334943|FBtr0084563|FBtr0345261|FBtr0084562 24248013|24248013|24248013|24248013|24248013|24248013 24250248|24250248|24250248|24248853|24250248|24250248 TCTTATGA 8mer-A1 dme-miR-970-3p 3R + 24248660 24248754 3'utr mask FlyBase G34197.1 ACACACCCGCATATACACAAATACATTTACGTTAGGATAAAAGTCAGTCTTATGAATGAAACATTAAATTGAAATGTTTAGCGCCAGCTAAAGTT 17 24248714 0.981160097 8 15 110 0.913043478 1.322219295 0.043478261 0.235294118 0.434782609 17 2 0 21 3R:24248660-24248754 8 11 3069 FBgn0043884 5250.546667 44.06333333 67.82333333 0.00209502 0.249640669 0.162186072 0 -7 -3.5 0.15 dme-miR-7-5p 6mer3-8 GTCTTC 3R 24291813 24291818 + 3R_24291813_24291818_+ 0.999975718 0.99996941 0.999972564 4.45E-06 CG6364 FBtr0084602|FBtr0309095|FBtr0309097|FBtr0309096 24291623|24291623|24291623|24291623 24292251|24292599|24293111|24293371 3R + 24291797 24291894 3'utr CG6364 FlyBase G45335.1 CATCGCTTCTCATTTGGTCTTCTCATCGTAACCGATTAACGTAGTCCTAAGATTGAAAAGTATCTTTAGTATCTACTCTTGCATATGTTCAACAATAC 16 24291811 0.790952198 11 16 141 1 1.230448921 0.176470588 0.0625 0.117647059 16 0 0 17 3R:24291797-24291894 6 CG6364 FBtr0309097|FBtr0309096|FBtr0084602|FBtr0309095 24291623|24291623|24291623|24291623 24293111|24293371|24292251|24292599 GTCTTC 6mer3-8 dme-miR-7-5p 3R + 24291799 24291845 3'utr CG6364 FlyBase G34222.1 TCGCTTCTCATTTGGTCTTCTCATCGTAACCGATTAACGTAGTCCTA 8 24291811 0.704601409 5 8 64 1 1.041392685 0.181818182 0.375 0.545454545 8 0 0 11 3R:24291799-24291845 6 7 3070 FBgn0263398 498.7566667 32.38666667 49.51666667 0.0140349 0.216138329 0.141366543 2 2 2 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3R 24328578 24328584 - 3R_24328578_24328584_- 0.521180022 0.521207387 0.521193705 1.94E-05 CG5728 FBtr0084632 24328453 24328688 3R - 24328514 24328593 3'utr CG5728 FlyBase G54186.1 TAAATGAAGTGTGATTCCGAGTGCTACCTTTAAATATATATGTATGATAGTACCTATATATTATAGAAATACATATAAAA 32 24328572 0.986496262 9 28 247 0.930232558 1.301029996 0.279069767 0.28125 0.465116279 32 2 1 40 3R:24328514-24328593 7 CG5728 FBtr0084632 24328453 24328688 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 24328536 24328641 3'utr CG5728 FlyBase G40919.1 AAGAGTTACATACAGTGTTTTTCATGATACTTTATTCTAAAACTATTTTAAATGAAGTGTGATTCCGAGTGCTACCTTTAAATATATATGTATGATAGTACCTATA 22 24328579 0.911690021 15 21 186 0.96969697 1.505149978 0.303030303 0.363636364 0.575757576 22 1 0 32 3R:24328536-24328641 7 19 3071 FBgn0039182 780.49 20.48333333 31.61333333 0.024343682 0.927583401 0.601012231 -12 -5 -8.5 0.15 dme-miR-14-3p 8mer-A1 AAGACTGA 3R 24344645 24344652 - 3R_24344645_24344652_- 0.643565259 0.643541655 0.643553457 1.67E-05 CG5746 FBtr0334603 24343893 24346710 3R - 24344606 24344746 3'utr CG5746 FlyBase G54200.1 ATGTATACAATGATTTTATTTGTTATTATTAAGCCGAACCTAAACTACAGTCTTAAAAAGTATAAACAAGATATGCAAATGAAAATTTATTAAAAAGACTGATACTTCACGAGATACAATCTCCATAGATCCAAAGAAACT 58 24344658 0.980591959 18 53 375 0.897058824 1.30820858 0.044117647 0.155172414 0.279411765 58 5 2 61 3R:24344606-24344746 8 CG5746 FBtr0334603 24343893 24346710 AAGACTGA 8mer-A1 dme-miR-14-3p 3R - 24344598 24344745 3'utr CG5746 FlyBase G40927.1 TGTATACAATGATTTTATTTGTTATTATTAAGCCGAACCTAAACTACAGTCTTAAAAAGTATAAACAAGATATGCAAATGAAAATTTATTAAAAAGACTGATACTTCACGAGATACAATCTCCATAGATCCAAAGAAACTAAATATAA 43 24344658 0.988572706 18 36 313 0.84375 1.033423755 0.109375 0.279069767 0.515625 43 6 4 54 3R:24344598-24344745 8 34.5 3072 FBgn0039186 880.5666667 39.34 60.32 0.039179316 0.876970005 0.571949602 6 6 6 0.15 dme-miR-980-5p 7mer-A1 AAAAACA 3R 24345211 24345217 - 3R_24345211_24345217_- 0.371970769 0.5201345 0.446052634 0.104767557 CG5746 FBtr0334603 24343893 24346710 3R - 24345203 24345243 3'utr CG5746 FlyBase G54202.1 ATTTTGGTAAGTTAAGGTTAATGCCAAAAAACATATATACA 13 24345222 0.910362096 2 13 69 1 1.176091259 0.133333333 0.153846154 0.266666667 13 0 0 15 3R:24345203-24345243 7 CG5746 FBtr0334603 24343893 24346710 AAAAACA 7mer-A1 dme-miR-980-5p 3R - 24345167 24345243 3'utr CG5746 FlyBase G40929.1 ATTTTGGTAAGTTAAGGTTAATGCCAAAAAACATATATACAAAAAATTTAGAATATGATGACCTCAGCATGCAAAAA 12 24345222 0.972305517 5 11 64 0.888888889 1.204119983 0.055555556 0.333333333 0.555555556 12 2 0 16 3R:24345167-24345243 7 12 3073 FBgn0039186 880.5666667 39.34 60.32 0.013627588 0.305033045 0.198938992 5 5 5 0.15 dme-miR-305-5p 8mer-A1 AGTACAAA 3R 24345262 24345269 - 3R_24345262_24345269_- 0.59748437 0.605487786 0.601486078 0.005659258 CG5746 FBtr0334603 24343893 24346710 3R - 24345256 24345328 3'utr CG5746 FlyBase G54203.1 CACGTACCATAACAATTCAATTAGATAAATATCTAAAATTACAAACTGAAAGCACTGAAAGTACAAAATGAAA 31 24345260 0.952942615 6 23 106 0.736842105 0.970036777 0.105263158 0.193548387 0.342105263 31 8 2 28 3R:24345256-24345328 8 CG5746 FBtr0334603 24343893 24346710 AGTACAAA 8mer-A1 dme-miR-305-5p 3R - 24345249 24345308 3'utr CG5746 FlyBase G40930.1 TTAGATAAATATCTAAAATTACAAACTGAAAGCACTGAAAGTACAAAATGAAAATATAAA 27 24345267 0.698878618 7 21 91 0.813953488 0.84509804 0.023255814 0.444444444 0.651162791 27 4 4 35 3R:24345249-24345308 8 24 3074 FBgn0039186 880.5666667 39.34 60.32 0.027255177 0.61006609 0.397877984 -9 -2 -5.5 0.15 dme-miR-14-3p 8mer-A1 AAGACTGA 3R 24345630 24345637 - 3R_24345630_24345637_- 0.643503088 0.643355615 0.643429351 0.000104298 CG5746 FBtr0334603 24343893 24346710 3R - 24345545 24345674 3'utr CG5746 FlyBase G54205.1 AGACGAATAATGAGTGAAAAATGTGAAAAAAAAACGTAAGACTGAATATATTCACGAACCGAAGCTGCACTGCAAGCATACAAGTCAAGAAAAATGAGAGACAAATGAATGAAATAACAGAGTTTTAAGT 42 24345638 0.930267726 12 41 151 0.978723404 1.662757832 0.170212766 0.119047619 0.212765957 42 1 0 46 3R:24345545-24345674 8 CG5746 FBtr0334603 24343893 24346710 AAGACTGA 8mer-A1 dme-miR-14-3p 3R - 24345597 24345648 3'utr CG5746 FlyBase G40932.1 AAAAAAAACGTAAGACTGAATATATTCACGAACCGAAGCTGCACTGCAAGCA 21 24345638 0.919651211 4 18 63 0.870967742 1.431363764 0 0.380952381 0.580645161 21 4 0 27 3R:24345597-24345648 8 20.5 3075 FBgn0039186 880.5666667 39.34 60.32 0.023280463 0.521098119 0.339854111 1 1 1 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 24346179 24346184 - 3R_24346179_24346184_- 0.999991239 0.999999982 0.999995611 6.22E-06 CG5746 FBtr0334603|FBtr0334602|FBtr0273282|FBtr0084631|FBtr0084630|FBtr0334601|FBtr0273283 24343893|24345790|24345790|24345790|24345790|24345790|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 3R - 24346008 24346201 3'utr CG5746 FlyBase G54207.1 AATGAGAGTACGTAACATGATCTTTTGAATGAACTAAATTTAAACATTTTGTGAATCATGTAAAATTGTATACAAATGAATGCAATGTATATTTTAGTTTTTAAGCTGAAAACCGCAATCCACTCTCGACACAATTATTTTCTATCCCACATGCATCTGAAAGCGTTTATGATTTTGCAAGATTGTGTTTTTTT 61 24346184 0.980956857 17 60 438 0.987179487 1.886490725 0.166666667 0.229508197 0.397435897 61 1 0 77 3R:24346008-24346201 6 CG5746 FBtr0273283|FBtr0084630|FBtr0334601|FBtr0273282|FBtr0084631|FBtr0334603|FBtr0334602 24345790|24345790|24345790|24345790|24345790|24343893|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 TGATCT 6mer3-8 dme-bantam-3p 3R - 24346140 24346207 3'utr CG5746 FlyBase G40934.1 CGGAAAAATGAGAGTACGTAACATGATCTTTTGAATGAACTAAATTTAAACATTTTGTGAATCATGTA 40 24346183 0.981501476 5 39 287 0.983050847 1.763427994 0.271186441 0.4 0.593220339 40 1 0 58 3R:24346140-24346207 6 36.5 3076 FBgn0039186 880.5666667 39.34 60.32 0.041450581 0.927808846 0.605106101 0 -1 -0.5 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 3R 24346235 24346241 - 3R_24346235_24346241_- 0.660618978 0.662336414 0.661477696 0.001214385 CG5746 FBtr0334603|FBtr0334602|FBtr0273282|FBtr0084631|FBtr0084630|FBtr0334601|FBtr0273283 24343893|24345790|24345790|24345790|24345790|24345790|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 3R - 24346228 24346333 3'utr CG5746 FlyBase G54208.1 TAGACAAACGGAGCTAGACTGCACTGAGCTCCAGCCTAAGAAAATTAAATGTGCTCCTCCTTAGTTCCATTTACAATTACAAGTCAACTGTGACCAAAGTATGCTA 25 24346264 0.972417503 15 23 144 0.935483871 1.462397998 0.193548387 0.2 0.35483871 25 2 0 29 3R:24346228-24346333 7 CG5746 FBtr0273283|FBtr0084630|FBtr0334601|FBtr0273282|FBtr0084631|FBtr0334603|FBtr0334602 24345790|24345790|24345790|24345790|24345790|24343893|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 24346226 24346289 3'utr CG5746 FlyBase G40935.1 TTAAATGTGCTCCTCCTTAGTTCCATTTACAATTACAAGTCAACTGTGACCAAAGTATGCTACA 15 24346245 0.725993815 10 15 102 1 1.342422681 0.136363636 0.4 0.590909091 15 0 0 22 3R:24346226-24346289 7 7.5 3077 FBgn0039186 880.5666667 39.34 60.32 0.008517243 0.190645653 0.12433687 23 4 13.5 0.15 dme-miR-1007-3p 6mer3-8 TGAGCT 3R 24346304 24346309 - 3R_24346304_24346309_- 0.978244306 0.876161371 0.927202838 0.072183511 CG5746 FBtr0334603|FBtr0334602|FBtr0273282|FBtr0084631|FBtr0084630|FBtr0334601|FBtr0273283 24343893|24345790|24345790|24345790|24345790|24345790|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 3R - 24346228 24346333 3'utr CG5746 FlyBase G54208.1 TAGACAAACGGAGCTAGACTGCACTGAGCTCCAGCCTAAGAAAATTAAATGTGCTCCTCCTTAGTTCCATTTACAATTACAAGTCAACTGTGACCAAAGTATGCTA 25 24346309 0.972417503 15 23 144 0.935483871 1.462397998 0.193548387 0.2 0.35483871 25 2 0 29 3R:24346228-24346333 6 CG5746 FBtr0273283|FBtr0084630|FBtr0334601|FBtr0273282|FBtr0084631|FBtr0334603|FBtr0334602 24345790|24345790|24345790|24345790|24345790|24343893|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 TGAGCT 6mer3-8 dme-miR-1007-3p 3R - 24346297 24346330 3'utr CG5746 FlyBase G40936.1 ACAAACGGAGCTAGACTGCACTGAGCTCCAGCCT 7 24346309 0.801854738 2 7 20 1 1.041392685 0 0.142857143 0.454545455 7 0 0 11 3R:24346297-24346330 6 7.5 3078 FBgn0039186 880.5666667 39.34 60.32 0.008517243 0.190645653 0.12433687 0 0 0 0.15 dme-miR-277-3p 7mer-A1 GCATTTA 3R 24346476 24346482 - 3R_24346476_24346482_- 0.823223085 0.819042716 0.821132901 0.002955989 CG5746 FBtr0334603|FBtr0334602|FBtr0273282|FBtr0084631|FBtr0084630|FBtr0334601|FBtr0273283 24343893|24345790|24345790|24345790|24345790|24345790|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 3R - 24346440 24346576 3'utr CG5746 FlyBase G54210.1 AATTAACTTGCTATACATAACACGCAAACACACACATACGCGGTCACTCAAAGCATACAATTTTAGTTTTAAGTATAAAGTTCTCTTTTTCTTAGCATTTAAGCAAACTAGTGTTTCGACGTCTTTCTACATAAACC 22 24346490 0.991484007 15 20 204 0.931034483 1.431363764 0.068965517 0.272727273 0.448275862 22 2 0 27 3R:24346440-24346576 7 CG5746 FBtr0273283|FBtr0084630|FBtr0334601|FBtr0273282|FBtr0084631|FBtr0334603|FBtr0334602 24345790|24345790|24345790|24345790|24345790|24343893|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 GCATTTA 7mer-A1 dme-miR-277-3p 3R - 24346448 24346506 3'utr CG5746 FlyBase G40938.1 AAGTATAAAGTTCTCTTTTTCTTAGCATTTAAGCAAACTAGTGTTTCGACGTCTTTCTA 6 24346491 0.994884186 5 5 63 0.857142857 0.77815125 0.285714286 0.166666667 0.285714286 6 1 0 6 3R:24346448-24346506 7 4 3079 FBgn0039186 880.5666667 39.34 60.32 0.004542529 0.101677682 0.066312997 8 9 8.5 0.15 dme-miR-7-5p 6mer2-7 TCTTCC 3R 24355848 24355853 + 3R_24355848_24355853_+ 0.999817964 0.999943852 0.999880908 8.90E-05 CG6454 FBtr0273323|FBtr0273324|FBtr0330373 24355777|24355777|24355801 24356241|24356241|24356241 3R + 24355821 24355869 3'utr CG6454 FlyBase G45385.1 CGTCCCAAAAGCGTATACTCTCTATTTTCTTCCGCTTAGCTAGAACTAT 7 24355847 0.714462663 5 6 64 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3R:24355821-24355869 6 CG6454 FBtr0330373|FBtr0273323|FBtr0273324 24355801|24355777|24355777 24356241|24356241|24356241 TCTTCC 6mer2-7 dme-miR-7-5p 3R + 24355809 24355893 3'utr CG6454 FlyBase G34254.1 TTTTACGCGAATCGTCCCAAAAGCGTATACTCTCTATTTTCTTCCGCTTAGCTAGAACTATCAGCTCTGCCCAGCAACTGGAGTT 12 24355848 0.950465007 9 11 82 0.933333333 1.146128036 0.066666667 0.25 0.4 12 1 0 14 3R:24355809-24355893 6 4.5 3080 FBgn0039187 605.7933333 16.75333333 25.68 0.007428276 0.268603263 0.175233645 1 0 0.5 0.15 dme-miR-252-5p 6mer3-8 GTACTT 3R 24536417 24536422 - 3R_24536417_24536422_- 0.999950803 0.998890215 0.999420509 0.000749957 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 3R - 24536316 24536446 3'utr CG5789 FlyBase G54228.1 CTATATTCATACAACCGAAATATTGTACTTGAAACTCTAGATAGAAATTTAATAAATAATCGTCGGGTTTATTAAAATATAAATAAGTTTCACACAAATTGGTAATAAAATTGTACATTTAACTTATTGAG 15 24536423 0.978457433 10 14 105 1 1.255272505 0.111111111 0.2 0.333333333 15 0 0 18 3R:24536316-24536446 6 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 GTACTT 6mer3-8 dme-miR-252-5p 3R - 24536315 24536438 3'utr CG5789 FlyBase G40949.1 ATACAACCGAAATATTGTACTTGAAACTCTAGATAGAAATTTAATAAATAATCGTCGGGTTTATTAAAATATAAATAAGTTTCACACAAATTGGTAATAAAATTGTACATTTAACTTATTGAGT 19 24536423 0.981217905 10 19 141 1 1.380211242 0.041666667 0.210526316 0.375 19 0 0 24 3R:24536315-24536438 6 8 3081 FBgn0039207 633.5166667 14.68333333 22.4 0.012627923 0.544835414 0.357142857 1 1 1 0.15 dme-miR-34-5p 6mer2-7 ACTGCC 3R 24536690 24536695 - 3R_24536690_24536695_- 0.887890329 0.999196964 0.943543646 0.078705722 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 3R - 24536647 24536743 3'utr CG5789 FlyBase G54230.1 CATTTCCTTAGTTTAGTTAAGTTTGTTAACGAAAAGTCTAGAATGTGTACTGCCTTATACGTATTGTACTTAGATGTAATCTCCACCAGGGACTACG 76 24536689 0.64873482 15 67 595 0.88 1.643452676 0.08 0.263157895 0.44 76 11 1 88 3R:24536647-24536743 6 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 ACTGCC 6mer2-7 dme-miR-34-5p 3R - 24536640 24536720 3'utr CG5789 FlyBase G40951.1 TGTTAACGAAAAGTCTAGAATGTGTACTGCCTTATACGTATTGTACTTAGATGTAATCTCCACCAGGGACTACGTTGTAAT 67 24536689 0.985773058 10 60 502 0.908045977 1.420505837 0.16091954 0.23880597 0.413793103 67 6 2 79 3R:24536640-24536720 6 54 3082 FBgn0039207 633.5166667 14.68333333 22.4 0.085238484 3.677639047 2.410714286 -6 -6 -6 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 24536787 24536792 - 3R_24536787_24536792_- 0.999848665 0.999898447 0.999873556 3.51E-05 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 3R - 24536759 24536843 3'utr CG5789 FlyBase G54231.1 CAACTCTTGGGCTCCCAATGGAAGAGGAATCTTGTCCAAAACAAAAACCGTACCAAAATGATTTTCTTGTGCACATACACATATT 32 24536785 0.864358553 10 31 204 0.974358974 1.579783597 0.025641026 0.1875 0.333333333 32 1 0 38 3R:24536759-24536843 6 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 24536765 24536891 3'utr CG5789 FlyBase G40952.1 CGGAAATCGCATTTAACCAAATCTGGTGCTTATAATGGCTCAAGGTTACAACTCTTGGGCTCCCAATGGAAGAGGAATCTTGTCCAAAACAAAAACCGTACCAAAATGATTTTCTTGTGCACATACA 38 24536784 0.985923419 14 33 271 0.875 1.146128036 0.0625 0.236842105 0.395833333 38 4 2 42 3R:24536765-24536891 6 23 3083 FBgn0039207 633.5166667 14.68333333 22.4 0.03630528 1.566401816 1.026785714 -7 -8 -7.5 0.15 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3R 24536862 24536868 - 3R_24536862_24536868_- 0.620200133 0.494433868 0.557317001 0.088930133 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 3R - 24536846 24536960 stop_codon CG5789 FlyBase G54232.1 CGGGACGAGCGAGATCGCGATCAGGATGAGAGCCAGGAGTGAGAAACGGTGGCCCAAAAAAATATCCATCGGAAATCGCATTTAACCAAATCTGGTGCTTATAATGGCTCAAGGT 18 24536868 0.969171997 8 18 102 1 1.322219295 0.047619048 0.166666667 0.285714286 18 0 0 21 3R:24536846-24536960 7 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3R - 24536765 24536891 3'utr CG5789 FlyBase G40952.1 CGGAAATCGCATTTAACCAAATCTGGTGCTTATAATGGCTCAAGGTTACAACTCTTGGGCTCCCAATGGAAGAGGAATCTTGTCCAAAACAAAAACCGTACCAAAATGATTTTCTTGTGCACATACA 38 24536860 0.985923419 14 33 271 0.875 1.146128036 0.0625 0.236842105 0.395833333 38 4 2 42 3R:24536765-24536891 7 12.5 3084 FBgn0039207 633.5166667 14.68333333 22.4 0.01973113 0.851305335 0.558035714 0 -8 -4 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 3R 24556533 24556538 + 3R_24556533_24556538_+ 0.999142208 0.959177105 0.979159656 0.028259593 Esyt2 FBtr0084647|FBtr0334336|FBtr0084648|FBtr0306024 24556324|24556324|24556324|24556324 24556549|24556549|24556549|24556549 3R + 24556507 24556547 3'utr Esyt2 FlyBase G45431.1 AATTTATTATAGTCAATAAATCGAACTGTGTTTTCAACAAA 14 24556538 0.971012952 3 13 106 0.933333333 1.146128036 0 0.071428571 0.133333333 14 1 0 14 3R:24556507-24556547 6 Esyt2 FBtr0306024|FBtr0084648|FBtr0334336|FBtr0084647 24556324|24556324|24556324|24556324 24556549|24556549|24556549|24556549 TGTGTT 6mer3-8 dme-miR-317-3p 3R + 24556500 24556547 3'utr Esyt2 FlyBase G34280.1 AACTATCAATTTATTATAGTCAATAAATCGAACTGTGTTTTCAACAAA 15 24556539 0.9820092 6 15 108 1 1.230448921 0.058823529 0.133333333 0.235294118 15 0 0 17 3R:24556500-24556547 6 14 3085 FBgn0266758 3194.34 129.4666667 198.0166667 0.004382752 0.108135942 0.070701119 -5 -6 -5.5 0.15 dme-miR-317-3p 8mer-A1 TGTGTTCA 3R 24558703 24558710 - 3R_24558703_24558710_- 0.627627468 0.625257521 0.626442494 0.001675843 CG13624 FBtr0084672 24557366 24560507 3R - 24558676 24558733 3'utr CG13624 FlyBase G54253.1 CTGCTATTTGTTGCTTAACGTGTTGTGTTCAATTGATATCAAAAGAATTAACTTTCGA 145 24558711 0.751239715 5 143 1366 1 2.292256071 0.433673469 0.289655172 0.474489796 145 0 0 196 3R:24558676-24558733 8 CG13624 FBtr0084672 24557366 24560507 TGTGTTCA 8mer-A1 dme-miR-317-3p 3R - 24558679 24558744 3'utr CG13624 FlyBase G40969.1 AGCCTTTCTTACTGCTATTTGTTGCTTAACGTGTTGTGTTCAATTGATATCAAAAGAATTAACTTT 142 24558711 0.755416847 9 141 1367 0.976303318 2.31386722 0.450236967 0.38028169 0.582938389 142 5 0 206 3R:24558679-24558744 8 141.5 3086 FBgn0039209 1863.993333 50.61333333 77.60666667 0.075912289 2.795706006 1.823296968 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 24558828 24558834 - 3R_24558828_24558834_- 0.775945248 0.775697445 0.775821347 0.000175221 CG13624 FBtr0084672|FBtr0084672|FBtr0084672 24557366|24557366|24557366 24560507|24560507|24560507 3R - 24558772 24558887 3'utr CG13624 FlyBase G54254.1 TTCTAATTTGCATTATCAAAATGAATACTTTTGCTCTGCTTCGATGCTAATTTTGTGATATTTGTATTCAAATTTTCTTTGTTGTGTAGTTCTTTGGGGCGGGATCCTCCTATTTT 179 24558836 0.99371934 18 168 2108 0.944954128 1.614897216 0.26146789 0.184357542 0.330275229 179 8 4 206 3R:24558772-24558887 7 CG13624 FBtr0084672|FBtr0084672|FBtr0084672 24557366|24557366|24557366 24560507|24560507|24560507 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 24558812 24558861 3'utr CG13624 FlyBase G40970.1 ACTTTTGCTCTGCTTCGATGCTAATTTTGTGATATTTGTATTCAAATTTT 126 24558836 0.715429481 11 113 1500 0.914893617 1.33243846 0.271276596 0.412698413 0.606382979 126 9 7 172 3R:24558812-24558861 7 147 3087 FBgn0039209 1863.993333 50.61333333 77.60666667 0.078862943 2.904373024 1.894167168 2 2 2 0.15 dme-miR-965-3p 6mer3-8 TACGCT 3R 24560392 24560397 - 3R_24560392_24560397_- 0.816149054 0.612252831 0.714200943 0.144176456 CG13624 FBtr0084674|FBtr0084673|FBtr0084672|FBtr0345204|FBtr0084675 24559278|24559278|24557366|24559787|24559787 24560507|24560507|24560507|24560507|24560507 3R - 24560382 24560448 5'utr CG13624 FlyBase G54262.1 AAGAACCTGGGCGAATCCACCGAGGAGGTGGACCAACAAATTGCACGCATTTACGCTACCGCCTCTT 8 24560398 0.917592041 6 7 27 1 0.903089987 0.25 0 0 8 0 0 8 3R:24560382-24560448 6 CG13624 FBtr0084673|FBtr0084674|FBtr0084675|FBtr0345204|FBtr0084672 24559278|24559278|24559787|24559787|24557366 24560507|24560507|24560507|24560507|24560507 TACGCT 6mer3-8 dme-miR-965-3p 3R - 24560385 24560434 5'utr CG13624 FlyBase G40976.1 ATCCACCGAGGAGGTGGACCAACAAATTGCACGCATTTACGCTACCGCCT 6 24560398 0.913816239 4 6 21 1 1.041392685 0 0.333333333 0.636363636 6 0 0 11 3R:24560385-24560434 6 3.5 3088 FBgn0039209 1863.993333 50.61333333 77.60666667 0.001877689 0.069151739 0.045099218 1 1 1 0.15 dme-miR-33-5p 7mer-A1 AATGCAA 3R 24623388 24623394 + 3R_24623388_24623394_+ 0.78162528 0.781882423 0.781753852 0.000181797 mld FBtr0304912|FBtr0304915|FBtr0304914|FBtr0304913|FBtr0111012 24623171|24623171|24623171|24623171|24623171 24623899|24623899|24623899|24623899|24623899 3R + 24623365 24623410 3'utr mld FlyBase G45457.1 AAAAGAACCAGCAGACTGCATTGAATGCAATCCCATATTGCACTAA 18 24623385 0.914976998 3 17 56 0.956521739 1.342422681 0.47826087 0.222222222 0.391304348 18 1 0 22 3R:24623365-24623410 7 mld FBtr0111012|FBtr0304914|FBtr0304913|FBtr0304912|FBtr0304915 24623171|24623171|24623171|24623171|24623171 24623899|24623899|24623899|24623899|24623899 AATGCAA 7mer-A1 dme-miR-33-5p 3R + 24623365 24623483 3'utr mld FlyBase G34297.1 AAAAGAACCAGCAGACTGCATTGAATGCAATCCCATATTGCACTAAAAACAAAAGAACACCTAGCGACTAAGCCAAGGATACACTCCCTCAGACACAAATCTTAAGGCTACAAAATATT 39 24623385 0.999256649 9 37 109 0.967213115 1.293730757 0.163934426 0.461538462 0.655737705 39 0 2 59 3R:24623365-24623483 7 15 3089 FBgn0263490 229.3433333 3.983333333 6.11 0.065404125 3.765690377 2.454991817 3 3 3 0.15 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 3R 24636299 24636306 - 3R_24636299_24636306_- 0.625338214 0.625363994 0.625351104 1.82E-05 puf FBtr0084668|FBtr0330309|FBtr0330308|FBtr0306172|FBtr0339135 24635268|24635268|24635268|24635268|24635268 24636457|24636403|24636457|24636457|24636457 3R - 24636280 24636320 3'utr puf FlyBase G54298.1 AAGCAACCCAAGGTTGGTGCTAATGGTTGGGTTTGGGTGCG 10 24636307 0.973345582 6 10 67 1 1.146128036 0.071428571 0.4 0.571428571 10 0 0 14 3R:24636280-24636320 8 puf FBtr0339135|FBtr0330308|FBtr0306172|FBtr0084668|FBtr0330309 24635268|24635268|24635268|24635268|24635268 24636457|24636457|24636457|24636457|24636403 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 3R - 24636279 24636320 3'utr puf FlyBase G41008.1 AAGCAACCCAAGGTTGGTGCTAATGGTTGGGTTTGGGTGCGT 8 24636307 0.948334022 3 7 35 1 1 0 0.25 0.4 8 0 0 10 3R:24636279-24636320 8 8.5 3090 FBgn0039214 1184.2 11.81333333 18.17333333 0.007177842 0.719525959 0.467718269 1 1 1 0.15 dme-miR-14-3p 6mer3-8 AAGACT 3R 24653288 24653293 + 3R_24653288_24653293_+ 0.999999161 0.999885269 0.999942215 8.05E-05 ash2 FBtr0084659|FBtr0306171|FBtr0084660 24653201|24653201|24653201 24653376|24653376|24653376 3R + 24653261 24653303 3'utr ash2 FlyBase G45491.1 CTATACTTTGGAAAGCAGAAATTTGAAAAGACTATCATCATAC 27 24653283 0.596601202 4 26 150 0.972972973 1.556302501 0.027027027 0.296296296 0.486486486 27 1 0 36 3R:24653261-24653303 6 ash2 FBtr0084659|FBtr0306171|FBtr0084660 24653201|24653201|24653201 24653376|24653376|24653376 AAGACT 6mer3-8 dme-miR-14-3p 3R + 24653256 24653302 3'utr ash2 FlyBase G34324.1 ATGCACTATACTTTGGAAAGCAGAAATTTGAAAAGACTATCATCATA 29 24653295 0.928222065 7 26 149 0.921052632 1.544068044 0.052631579 0.275862069 0.447368421 29 3 0 35 3R:24653256-24653302 6 24.5 3091 FBgn0000139 191.3333333 12.33666667 18.87 0.12804878 1.985949743 1.298357181 5 -7 -1 0.15 dme-miR-1012-3p 7mer-m8 TTGACTA 3R 24659209 24659215 + 3R_24659209_24659215_+ 0.443396246 0.409792838 0.426594542 0.023761192 CG6695 FBtr0089915 24658378 24659379 3R + 24659194 24659231 stop_codon CG6695 FlyBase G45502.1 AGCTCAAGAAACTGGTTGACTATTGATCCCAAAACCGT 24 24659216 0.671720792 3 23 129 0.965517241 1.447158031 0.068965517 0.208333333 0.344827586 24 1 0 28 3R:24659194-24659231 7 CG6695 FBtr0089915 24658378 24659379 TTGACTA 7mer-m8 dme-miR-1012-3p 3R + 24659197 24659230 stop_codon CG6695 FlyBase G34330.1 TCAAGAAACTGGTTGACTATTGATCCCAAAACCG 11 24659216 0.666410168 4 11 58 1 1.278753601 0.210526316 0.454545455 0.684210526 11 0 0 19 3R:24659197-24659230 7 17 3092 FBgn0039215 827.2766667 31.71333333 48.7 0.020549353 0.536052134 0.349075975 -7 -7 -7 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 3R 24760277 24760282 + 3R_24760277_24760282_+ 0.620281658 0.640722812 0.630502235 0.01445404 asp FBtr0084692 24760231 24760513 3R + 24760167 24760373 stop_codon asp FlyBase G45533.1 ACGTTTATCTCGTCCGTTTACGCCTTCGATACGATTTTGTGCAAGCTGCAGATCGACATGTTTTAGATTTAGGAAAATTCATCTTTAAATGTTTAATGTTAAAACCATTCTGTGTTGTGTTTTAAAATAGTCACATAAATTCTTAGACCATGCTAGTTTTTTGGAGACAATTAGAAATAGTTTAAGATAATCTAAGACCGTCTTAAC 88 24760275 0.831793272 25 81 906 0.923076923 1.982271233 0.153846154 0.159090909 0.288461538 88 8 0 96 3R:24760167-24760373 6 asp FBtr0084692 24760231 24760513 TGTGTT 6mer3-8 dme-miR-317-3p 3R + 24760248 24760354 3'utr asp FlyBase G34349.1 TCTTTAAATGTTTAATGTTAAAACCATTCTGTGTTGTGTTTTAAAATAGTCACATAAATTCTTAGACCATGCTAGTTTTTTGGAGACAATTAGAAATAGTTTAAGAT 39 24760275 0.877326542 13 37 392 0.964912281 1.740362689 0.192982456 0.333333333 0.543859649 39 2 0 55 3R:24760248-24760354 6 44 3093 FBgn0000140 1001.803333 19.02666667 29.17333333 0.043920796 2.312543798 1.508226691 2 2 2 0.15 dme-miR-1008-3p 6mer2-7 GCTGTG 3R 24769845 24769850 + 3R_24769845_24769850_+ 0.998670658 0.999240269 0.998955463 0.000402768 CG13631 FBtr0084693|FBtr0339253 24769772|24769772 24770111|24770933 3R + 24769815 24769890 3'utr CG13631 FlyBase G45538.1 CGAACGGTCGCAGGAGCGGTCGAGTGCTGTGCTGTGGGTTGTCGGCGGGGGATCTCTGGCTGATCGGAGGAAGGAT 173 24769843 0.767996026 12 168 1129 0.955 1.980003372 0.545 0.12716763 0.245 173 8 1 191 3R:24769815-24769890 6 CG13631 FBtr0339253|FBtr0084693 24769772|24769772 24770933|24770111 GCTGTG 6mer2-7 dme-miR-1008-3p 3R + 24769815 24769915 3'utr CG13631 FlyBase G34353.1 CGAACGGTCGCAGGAGCGGTCGAGTGCTGTGCTGTGGGTTGTCGGCGGGGGATCTCTGGCTGATCGGAGGAAGGATAACACGGAGATATGGATTTGGATAT 206 24769843 0.770927398 13 199 1349 0.968944099 1.892094603 0.562111801 0.412621359 0.624223602 206 7 3 312 3R:24769815-24769915 6 165.5 3094 FBgn0040600 1409.473333 109.07 167.31 0.117419745 1.517374163 0.989181758 2 2 2 0.15 dme-miR-995-5p 6mer3-8 AATTCG 3R 24769925 24769930 + 3R_24769925_24769930_+ 0.845837552 0.848440349 0.847138951 0.001840387 CG13631 FBtr0084693|FBtr0339253 24769772|24769772 24770111|24770933 3R + 24769893 24769955 3'utr CG13631 FlyBase G45539.1 CACGGAGATATGGATTTGGATATGACACAAAGAATTCGCGCCACTTCAAGGACCTAAAGAATT 24 24769927 0.80762608 6 20 109 0.857142857 0.903089987 0.107142857 0.125 0.25 24 2 2 24 3R:24769893-24769955 6 CG13631 FBtr0339253|FBtr0084693 24769772|24769772 24770933|24770111 AATTCG 6mer3-8 dme-miR-995-5p 3R + 24769921 24769956 3'utr CG13631 FlyBase G34354.1 AAAGAATTCGCGCCACTTCAAGGACCTAAAGAATTC 13 24769927 0.8268191 3 13 55 1 1.278753601 0.157894737 0.307692308 0.526315789 13 0 0 19 3R:24769921-24769956 6 16.5 3095 FBgn0040600 1409.473333 109.07 167.31 0.0117065 0.151278995 0.098619329 -2 -2 -2 0.15 dme-miR-282-5p 7mer-m8 AGAGGCT 3R 24770042 24770048 + 3R_24770042_24770048_+ 0.631513849 0.631523694 0.631518772 7.00E-06 CG13631 FBtr0084693|FBtr0339253 24769772|24769772 24770111|24770933 3R + 24769968 24770108 3'utr CG13631 FlyBase G45540.1 GTTCCCAAGATTCCAATGGGTAATCCAAATAGTTCGATTCGTATGACCCGAATGGGTGATCCCCGGATCACGTTAGAGGCTTCAAAGTGTTGGCAGGGGACAGGGCAATCTGTGTAACGACATTCCTTCTCAACAATAACT 147 24770041 0.975419638 16 136 859 0.920903955 1.911157609 0.271186441 0.170068027 0.310734463 147 13 1 163 3R:24769968-24770108 7 CG13631 FBtr0339253|FBtr0084693 24769772|24769772 24770933|24770111 AGAGGCT 7mer-m8 dme-miR-282-5p 3R + 24769998 24770102 3'utr CG13631 FlyBase G34355.1 AGTTCGATTCGTATGACCCGAATGGGTGATCCCCGGATCACGTTAGAGGCTTCAAAGTGTTGGCAGGGGACAGGGCAATCTGTGTAACGACATTCCTTCTCAACA 105 24770041 0.936151021 13 93 551 0.873493976 2.161368002 0.313253012 0.419047619 0.63253012 105 21 0 145 3R:24769998-24770102 7 98.5 3096 FBgn0040600 1409.473333 109.07 167.31 0.069884259 0.903089759 0.588727512 1 1 1 0.15 dme-miR-305-3p 6mer2-7 TGTGCC 3R 24770673 24770678 + 3R_24770673_24770678_+ 0.998479146 0.999974534 0.99922684 0.001057407 CG13631 FBtr0339253 24769772 24770933 3R + 24770600 24770744 3'utr CG13631 FlyBase G45545.2 TTAATATCTATACTACTGTTACTACTCTAATAATCATATTGTATGTGCCGCACGAGGAGAGGGAACTCAAAATTGTGCCCCCAAATGGGTGGTGGATGGTGTTTGCTCAAGTGATTCGTACTAAAATGGCAGCGGGAATGCGATT 57 24770674 0.962280244 20 52 302 0.936507937 1.770852012 0.206349206 0.087719298 0.174603175 57 4 0 59 3R:24770600-24770744 6 CG13631 FBtr0339253 24769772 24770933 TGTGCC 6mer2-7 dme-miR-305-3p 3R + 24770640 24770739 3'utr CG13631 FlyBase G34359.1 GTATGTGCCGCACGAGGAGAGGGAACTCAAAATTGTGCCCCCAAATGGGTGGTGGATGGTGTTTGCTCAAGTGATTCGTACTAAAATGGCAGCGGGAATG 35 24770674 0.9877235 14 32 172 0.928571429 1.716003344 0.321428571 0.371428571 0.607142857 35 4 0 52 3R:24770640-24770739 6 22 3097 FBgn0040600 1409.473333 109.07 167.31 0.015608667 0.201705327 0.131492439 -1 -1 -1 0.15 dme-miR-1006-3p 7mer-A1 GAATTTA 3R 24770792 24770798 + 3R_24770792_24770798_+ 0.822184901 0.823194912 0.822689906 0.000714178 CG13631 FBtr0339253 24769772 24770933 3R + 24770747 24770825 3'utr CG13631 FlyBase G45546.1 TCGCAGAGTGAGAAGTGCTGTAAGTGGCGAATGTTTCGAATGAGAGAATTTAGTTTAGAGAGCGGAGCATCTACAATAT 24 24770796 0.978983812 11 23 159 0.965517241 1.447158031 0.275862069 0.166666667 0.310344828 24 1 0 28 3R:24770747-24770825 7 CG13631 FBtr0339253 24769772 24770933 GAATTTA 7mer-A1 dme-miR-1006-3p 3R + 24770745 24770844 3'utr CG13631 FlyBase G34360.1 AATCGCAGAGTGAGAAGTGCTGTAAGTGGCGAATGTTTCGAATGAGAGAATTTAGTTTAGAGAGCGGAGCATCTACAATATATTTATTATACCTATGAAA 24 24770799 0.978507157 13 22 149 0.967741935 1.176091259 0.129032258 0.260869565 0.451612903 23 0 1 30 3R:24770745-24770844 7 16.5 3098 FBgn0040600 1409.473333 109.07 167.31 0.0117065 0.151278995 0.098619329 -4 -7 -5.5 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 24784792 24784798 - 3R_24784792_24784798_- 0.619147704 0.661614668 0.640381186 0.030028704 CG5805 FBtr0339255|FBtr0084743 24784550|24784735 24785395|24785395 3R - 24784737 24784855 3'utr CG5805 FlyBase G54348.1 GGGTCGCCCCTCCCCAGAGGTCGGGAGGCACTACACTTAGCTAAGCATTCGTGTGTGTGTGTTCTCTGAGTGGATAAACTAGTTTTAGTCTGCATTATAATAAAGTACAAACCAAGAAT 24 24784789 0.98179833 14 22 188 0.935483871 1.462397998 0.258064516 0.291666667 0.451612903 24 2 0 29 3R:24784737-24784855 7 CG5805 FBtr0339255|FBtr0084743 24784550|24784735 24785395|24785395 TGTGTTC 7mer-m8 dme-miR-317-3p 3R - 24784739 24784819 3'utr CG5805 FlyBase G41044.1 TTAGCTAAGCATTCGTGTGTGTGTGTTCTCTGAGTGGATAAACTAGTTTTAGTCTGCATTATAATAAAGTACAAACCAAGA 13 24784799 0.986793487 7 12 99 1 1.204119983 0.5 0.230769231 0.375 13 0 0 16 3R:24784739-24784819 7 9.5 3099 FBgn0039223 334.22 19.37333333 29.52666667 0.028424391 0.490364763 0.321743057 -9 1 -4 0.15 dme-miR-1006-3p 6mer3-8 CGAATT 3R 24784875 24784880 - 3R_24784875_24784880_- 0.999999999 0.995967075 0.997983537 0.002851691 CG5805 FBtr0339255|FBtr0084743 24784550|24784735 24785395|24785395 3R - 24784863 24784927 3'utr CG5805 FlyBase G54348.2 AGCACAGCAATGTTTGCGCCAAACAAAATACCACAAACTGGACATGCCGAATTAGAAATTAATAT 11 24784882 0.98179833 5 10 43 0.933333333 1.146128036 0 0.272727273 0.466666667 11 1 0 14 3R:24784863-24784927 6 CG5805 FBtr0339255|FBtr0084743 24784550|24784735 24785395|24785395 CGAATT 6mer3-8 dme-miR-1006-3p 3R - 24784862 24784901 3'utr CG5805 FlyBase G41045.1 AATACCACAAACTGGACATGCCGAATTAGAAATTAATATC 7 24784876 0.939945793 3 5 25 0.866666667 1.113943352 0 0.714285714 0.866666667 7 2 0 13 3R:24784862-24784901 6 7 3100 FBgn0039223 334.22 19.37333333 29.52666667 0.020944288 0.361321404 0.237073832 2 -4 -1 0.15 dme-miR-79-3p 6mer3-8 TAGCTT 3R 24785106 24785111 - 3R_24785106_24785111_- 0.711421948 0.509890109 0.610656028 0.142504502 CG5805 FBtr0339255|FBtr0084743 24784550|24784735 24785395|24785395 3R - 24785100 24785136 3'utr CG5805 FlyBase G54351.1 AATATGCAAATACCCCAAAGTGTTGTAGCTTAAAGTG 10 24785115 0.678201112 4 9 55 0.923076923 1.079181246 0.076923077 0.3 0.461538462 10 1 0 12 3R:24785100-24785136 6 CG5805 FBtr0339255|FBtr0084743 24784550|24784735 24785395|24785395 TAGCTT 6mer3-8 dme-miR-79-3p 3R - 24785097 24785136 3'utr CG5805 FlyBase G41047.1 AATATGCAAATACCCCAAAGTGTTGTAGCTTAAAGTGTAC 5 24785115 0.801735196 3 5 34 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:24785097-24785136 6 5.5 3101 FBgn0039223 334.22 19.37333333 29.52666667 0.016456226 0.283895389 0.186272296 4 4 4 0.15 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 24805499 24805506 - 3R_24805499_24805506_- 0.374541605 0.380760225 0.377650915 0.004397214 CG5807 FBtr0331697 24805443 24805557 3R - 24805486 24805534 3'utr CG5807 FlyBase G54386.2 AATTTAAGGAAAACTACCTACGATATTGCTGTGATTCAATGACTTAATT 19 24805509 0.981679455 7 18 145 0.958333333 1.361727836 0.083333333 0.157894737 0.333333333 19 1 0 23 3R:24805486-24805534 8 CG5807 FBtr0331697 24805443 24805557 CTGTGATT 8mer-m1 dme-miR-308-3p 3R - 24805451 24805529 3'utr CG5807 FlyBase G41070.1 AAGGAAAACTACCTACGATATTGCTGTGATTCAATGACTTAATTAAAACTTTAAATGATGCTTTAGGGATGCTATAATA 22 24805508 0.771724634 10 22 195 1 1.556302501 0.222222222 0.363636364 0.611111111 22 0 0 36 3R:24805451-24805529 8 15.5 3102 FBgn0027539 323.6833333 14.69666667 22.53666667 0.047886309 1.054660921 0.687768082 3 2 2.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 24805706 24805712 - 3R_24805706_24805712_- 0.753212649 0.75302444 0.753118545 0.000133077 CG5807 FBtr0084739|FBtr0084739|FBtr0084739 24805665|24805665|24805665 24806410|24806410|24806410 3R - 24805666 24805734 3'utr CG5807 FlyBase G54387.1 ACTAACAAGCGTCTAAAACTTATGTGATAAAAAATAATAATAAACAAAGCATTTTACTAAATTAATCGA 84 24805714 0.976377962 5 80 517 0.95959596 1.977723605 0.090909091 0.130952381 0.262626263 84 4 0 95 3R:24805666-24805734 7 CG5807 FBtr0084739|FBtr0084739|FBtr0084739 24805665|24805665|24805665 24806410|24806410|24806410 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 24805689 24805736 3'utr CG5807 FlyBase G41071.1 ACACTAACAAGCGTCTAAAACTTATGTGATAAAAAATAATAATAAACA 64 24805714 0.803519252 7 61 386 0.966666667 1.939519253 0.133333333 0.359375 0.544444444 64 3 0 87 3R:24805689-24805736 7 73 3103 FBgn0027539 323.6833333 14.69666667 22.53666667 0.225529066 4.967112724 3.239165804 2 2 2 0.15 dme-miR-2a-2-5p 7mer-m1 GATGAGG 3R 24805795 24805801 - 3R_24805795_24805801_- 0.789764624 0.810010443 0.799887533 0.014315942 CG5807 FBtr0084739 24805665 24806410 3R - 24805774 24805836 3'utr CG5807 FlyBase G54388.1 ATAAGATTTTAACAATGTTCCTTAAGCAGCGAAACGATGAGGCGTGTTCATTTCATTTTACGG 110 24805821 0.977067508 9 107 648 0.9609375 1.788875116 0.0625 0.154545455 0.2734375 110 4 1 123 3R:24805774-24805836 7 CG5807 FBtr0084739 24805665 24806410 GATGAGG 7mer-m1 dme-miR-2a-2-5p 3R - 24805785 24805834 3'utr CG5807 FlyBase G41072.1 AAGATTTTAACAATGTTCCTTAAGCAGCGAAACGATGAGGCGTGTTCATT 70 24805821 0.983464342 4 68 395 0.982608696 1.752048448 0.113043478 0.471428571 0.67826087 70 1 1 113 3R:24805785-24805834 7 38 3104 FBgn0027539 323.6833333 14.69666667 22.53666667 0.117398692 2.585620322 1.686141103 20 20 20 0.15 dme-miR-307a-3p 6mer2-7 GTTGTG 3R 24806155 24806160 - 3R_24806155_24806160_- 0.856349764 0.999289293 0.927819529 0.10107349 CG5807 FBtr0084739 24805665 24806410 3R - 24806106 24806315 3'utr CG5807 FlyBase G54391.2 TACCAAGTATCGTAACCTTAGTCGTAAGAGCAGTCGCAATACCACCGCTAGTCGCAAGGCAAACGAAATGAACTGTTAAGACACGAGAAAAACATGGGAGATGGGCAGCTGAAACTATATAATATACCTTTACATATGTTATATGATCACGTATAGTTGTGCAGAACTGATACTAATATTTAAATTTTGCAATGTTAACTGTTGTGCTTA 83 24806157 0.912604631 24 76 433 0.91 1.481920138 0.16 0.180722892 0.32 83 7 2 91 3R:24806106-24806315 6 CG5807 FBtr0084739 24805665 24806410 GTTGTG 6mer2-7 dme-miR-307a-3p 3R - 24806130 24806170 3'utr CG5807 FlyBase G41074.2 ATCACGTATAGTTGTGCAGAACTGATACTAATATTTAAATT 21 24806158 0.605658899 8 19 124 0.962962963 1.414973348 0.037037037 0.238095238 0.407407407 21 1 0 26 3R:24806130-24806170 6 25.5 3105 FBgn0027539 323.6833333 14.69666667 22.53666667 0.078780701 1.735087321 1.131489425 -3 -2 -2.5 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 24806206 24806212 - 3R_24806206_24806212_- 0.658805608 0.658979087 0.658892347 0.000122683 CG5807 FBtr0084739 24805665 24806410 3R - 24806106 24806315 3'utr CG5807 FlyBase G54391.2 TACCAAGTATCGTAACCTTAGTCGTAAGAGCAGTCGCAATACCACCGCTAGTCGCAAGGCAAACGAAATGAACTGTTAAGACACGAGAAAAACATGGGAGATGGGCAGCTGAAACTATATAATATACCTTTACATATGTTATATGATCACGTATAGTTGTGCAGAACTGATACTAATATTTAAATTTTGCAATGTTAACTGTTGTGCTTA 83 24806214 0.912604631 24 76 433 0.91 1.481920138 0.16 0.180722892 0.32 83 7 2 91 3R:24806106-24806315 7 CG5807 FBtr0084739 24805665 24806410 GGCAGCT 7mer-m8 dme-miR-980-3p 3R - 24806189 24806287 3'utr CG5807 FlyBase G41075.1 AGCAGTCGCAATACCACCGCTAGTCGCAAGGCAAACGAAATGAACTGTTAAGACACGAGAAAAACATGGGAGATGGGCAGCTGAAACTATATAATATAC 23 24806214 0.824993052 7 21 65 0.911764706 1.491361694 0.147058824 0.391304348 0.588235294 23 3 0 31 3R:24806189-24806287 7 20.5 3106 FBgn0027539 323.6833333 14.69666667 22.53666667 0.063333505 1.394874121 0.909628753 2 2 2 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 24854437 24854442 + 3R_24854437_24854442_+ 0.99873168 0.999279956 0.999005818 0.000387707 nct FBtr0301865|FBtr0306087|FBtr0334570|FBtr0084705 24854236|24854089|24854385|24854236 24854869|24854569|24854869|24854569 3R + 24854393 24854498 3'utr nct FlyBase G45585.1 AAAGAATATCTGATCACGTGCCGAAGATGATTGGTTGCTGAATATGATCTAAAACAAAAAACAGACTTAACAAAGACACTAAAATGATATTCTAACTCGTCTTATT 108 24854437 0.979653696 13 104 720 0.96031746 2.08278537 0.03968254 0.148148148 0.26984127 108 5 0 121 3R:24854393-24854498 6 nct FBtr0334570|FBtr0301865|FBtr0306087 24854385|24854236|24854089 24854869|24854869|24854569 TGATCT 6mer3-8 dme-bantam-3p 3R + 24854408 24854502 3'utr nct FlyBase G34380.2 ACGTGCCGAAGATGATTGGTTGCTGAATATGATCTAAAACAAAAAACAGACTTAACAAAGACACTAAAATGATATTCTAACTCGTCTTATTTAAA 81 24854437 0.747772255 16 76 525 0.915254237 1.556302501 0.033898305 0.345679012 0.550847458 81 8 2 108 3R:24854408-24854502 6 77 3107 FBgn0039234 994.94 43.80666667 67.10333333 0.077391602 1.75772333 1.14748398 0 0 0 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 24854785 24854790 + 3R_24854785_24854790_+ 0.968009192 0.954733964 0.961371578 0.009386984 nct FBtr0301865|FBtr0334570 24854236|24854385 24854869|24854869 3R + 24854647 24854808 3'utr nct FlyBase G45587.1 TAGGATTAACCAACCCAATTGAACCTCTGATAATGCCAAGGAAGAGATGTCTGTACAAATATTGACAAGAAACTGCTATAACTTATAAATCACTGGAAATATTTATACCTTCTGCATCTATTGCGATACTGAACTTAATGATCTGAAATCATTACTTCATAG 112 24854785 0.831493117 26 107 741 0.956834532 1.822821645 0.079136691 0.214285714 0.366906475 112 5 1 133 3R:24854647-24854808 6 nct FBtr0334570|FBtr0301865 24854385|24854236 24854869|24854869 TGATCT 6mer3-8 dme-bantam-3p 3R + 24854755 24854840 3'utr nct FlyBase G34382.1 CTTCTGCATCTATTGCGATACTGAACTTAATGATCTGAAATCATTACTTCATAGAAGACAAATAATTATTATAACGACTTTAAATT 50 24854785 0.976912572 7 49 329 0.973333333 1.86332286 0.053333333 0.4 0.6 50 2 0 73 3R:24854755-24854840 6 51.5 3108 FBgn0039234 994.94 43.80666667 67.10333333 0.051761915 1.175620149 0.767473052 0 0 0 0.15 dme-miR-965-3p 7mer-m8 TACGCTT 3R 24868756 24868762 - 3R_24868756_24868762_- 0.618645146 0.620079178 0.619362162 0.001014062 CycB3 FBtr0334578 24867932 24868800 3R - 24868585 24868800 3'utr CycB3 FlyBase G54409.1 GACAGCCTCAAAGTTTAGCCAAATTCAACATGATACGATACGCTTCACTTAGGCTCTAAGACGCTTCTATTCCCAATATTAGCCCCATCCCGACGAAACAGCGGATCCCCGCCTTAATCTAAAAACCCCTGATTTTACCCCTTACCTAGTGTTCCCGTCAAGTCCTCGCAATTTATTATATTTTAATTATTATTGTGACCTTCGCATTATTGACAT 260 24868762 0.999926671 28 239 1955 0.919732441 1.594234654 0.163879599 0.130769231 0.244147157 260 18 6 275 3R:24868585-24868800 7 CycB3 FBtr0084728|FBtr0334578 24868354|24867932 24868800|24868800 TACGCTT 7mer-m8 dme-miR-965-3p 3R - 24868631 24868801 stop_codon CycB3 FlyBase G41090.1 GGACAGCCTCAAAGTTTAGCCAAATTCAACATGATACGATACGCTTCACTTAGGCTCTAAGACGCTTCTATTCCCAATATTAGCCCCATCCCGACGAAACAGCGGATCCCCGCCTTAATCTAAAAACCCCTGATTTTACCCCTTACCTAGTGTTCCCGTCAAGTCCTCGCA 106 24868762 0.983092285 20 95 716 0.90797546 1.471291711 0.233128834 0.358490566 0.582822086 106 11 4 148 3R:24868631-24868801 7 122 3109 FBgn0015625 158.3333333 6.95 10.59666667 0.770526316 17.55395683 11.51305442 0 0 0 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3R 24922285 24922290 + 3R_24922285_24922290_+ 0.771328931 0.967186538 0.869257734 0.138492237 CG11168 FBtr0306089|FBtr0084715|FBtr0337009|FBtr0337010 24920050|24922185|24922185|24922185 24922385|24922385|24922385|24922385 3R + 24922272 24922352 3'utr CG11168 FlyBase G45600.1 TTTTACTCATTTGCTAGTCGTTGATGCCATCTCGATGCTGGCTTTGCTCCACATAAGGCAGCTCACATGTTAAGTATTTTG 31 24922283 0.773283678 12 30 262 0.973684211 1.568201724 0.157894737 0.193548387 0.342105263 31 1 0 37 3R:24922272-24922352 6 CG11168 FBtr0337010|FBtr0337009|FBtr0084715|FBtr0306089 24922185|24922185|24922185|24920050 24922385|24922385|24922385|24922385 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3R + 24922269 24922337 3'utr CG11168 FlyBase G34389.1 TTTTTTTACTCATTTGCTAGTCGTTGATGCCATCTCGATGCTGGCTTTGCTCCACATAAGGCAGCTCAC 28 24922282 0.946826023 9 27 216 0.888888889 1.602059991 0.311111111 0.392857143 0.622222222 28 5 0 40 3R:24922269-24922337 6 23.5 3110 FBgn0039249 138.3333333 5.443333333 8.356666667 0.169879518 4.317207593 2.812126047 2 3 2.5 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 24935214 24935219 - 3R_24935214_24935219_- 0.999841084 0.998650625 0.999245855 0.000841811 Osbp FBtr0084801 24934867 24935398 3R - 24935195 24935240 3'utr Osbp FlyBase G54445.1 GCATATTGTAGTACCACACTTTGATCTAGAGCATATTTATATATAT 43 24935220 0.715473304 6 42 296 0.962264151 1.707570176 0.132075472 0.209302326 0.358490566 43 2 0 51 3R:24935195-24935240 6 Osbp FBtr0084801 24934867 24935398 TGATCT 6mer3-8 dme-bantam-3p 3R - 24935194 24935279 3'utr Osbp FlyBase G41117.1 AGCGGGACACGCTCCGACTGATTTCGGAGCAGCACATACGCATATTGTAGTACCACACTTTGATCTAGAGCATATTTATATATATA 36 24935220 0.846820347 7 35 210 0.964912281 1.740362689 0.105263158 0.444444444 0.649122807 36 2 0 55 3R:24935194-24935279 6 32 3111 FBgn0020626 533.3433333 19.94666667 30.62 0.059998875 1.604278075 1.045068583 1 1 1 0.15 dme-miR-252-5p 6mer3-8 GTACTT 3R 24939081 24939086 - 3R_24939081_24939086_- 0.999999304 0.999866781 0.999933042 9.37E-05 ssh FBtr0084799|FBtr0301612|FBtr0084800|FBtr0301613 24938708|24939001|24939001|24939001 24939428|24939804|24939428|24939804 3R - 24939010 24939126 3'utr ssh FlyBase G54460.1 GAGGGCAAACAAAACAACCTATGGAAATGAAACTGTATTTGTACTTTTAAATTACTTGTAACTGTATACATATTTATTTTATATTATGCAAGAACTGCCTACGAATAAACGATTTAT 48 24939105 0.982895212 16 45 339 0.925925926 1.698970004 0.074074074 0.125 0.222222222 48 4 0 50 3R:24939010-24939126 6 ssh FBtr0084800|FBtr0301613|FBtr0084799|FBtr0301612 24939001|24939001|24938708|24939001 24939428|24939804|24939428|24939804 GTACTT 6mer3-8 dme-miR-252-5p 3R - 24939006 24939128 3'utr ssh FlyBase G41125.1 GAGAGGGCAAACAAAACAACCTATGGAAATGAAACTGTATTTGTACTTTTAAATTACTTGTAACTGTATACATATTTATTTTATATTATGCAAGAACTGCCTACGAATAAACGATTTATTGTA 30 24939105 0.97558687 11 28 187 0.926829268 1.278753601 0.219512195 0.366666667 0.536585366 30 2 1 38 3R:24939006-24939128 6 11.5 3112 FBgn0029157 492.83 13.26666667 20.39666667 0.023334618 0.866834171 0.563817617 19 19 19 0.15 dme-miR-283-5p 8mer-A1 TGATATTA 3R 24947361 24947368 + 3R_24947361_24947368_+ 0.552583238 0.586757168 0.569670203 0.024164667 Nmnat FBtr0337012|FBtr0084749 24947303|24947303 24947400|24947400 3R + 24947325 24947379 3'utr Nmnat FlyBase G45633.1 ACGCGGATTAAGACAGGGGCGCTGGAAGCTATTTGTTGATATTATATAAATATGC 28 24947357 0.865384915 5 26 212 0.928571429 1.113943352 0.178571429 0 0 28 1 1 26 3R:24947325-24947379 8 Nmnat FBtr0084749|FBtr0337012 24947303|24947303 24947400|24947400 TGATATTA 8mer-A1 dme-miR-283-5p 3R + 24947334 24947375 3'utr Nmnat FlyBase G34407.1 AAGACAGGGGCGCTGGAAGCTATTTGTTGATATTATATAAAT 15 24947357 0.977301319 4 15 133 1 1.322219295 0.142857143 0.333333333 0.523809524 15 0 0 21 3R:24947334-24947375 8 15 3113 FBgn0039254 101.0166667 10.28666667 15.83333333 0.148490348 1.458198315 0.947368421 4 4 4 0.15 dme-miR-1012-3p 6mer2-7 TGACTA 3R 25029661 25029666 - 3R_25029661_25029666_- 0.998800534 0.999988245 0.999394389 0.000839831 Smg6 FBtr0084796 25029427 25029778 3R - 25029617 25029708 3'utr Smg6 FlyBase G54482.1 GGAGCGAGCTCGAGCTATTATATTACCTACATTATACATAAATGACTATGTAAGACGGGGTCGGCAGATGCGGACACATACGCTGGCTGCGG 11 25029686 0.968148557 6 10 58 0.846153846 1.041392685 0.461538462 0.181818182 0.307692308 11 2 0 11 3R:25029617-25029708 6 Smg6 FBtr0084796 25029427 25029778 TGACTA 6mer2-7 dme-miR-1012-3p 3R - 25029617 25029696 3'utr Smg6 FlyBase G41140.1 AGCTATTATATTACCTACATTATACATAAATGACTATGTAAGACGGGGTCGGCAGATGCGGACACATACGCTGGCTGCGG 7 25029677 0.988423747 6 6 41 0.9 0.954242509 0.1 0.428571429 0.6 7 1 0 9 3R:25029617-25029696 6 3.5 3114 FBgn0039260 358.6633333 12.99666667 19.73666667 0.009758455 0.26929982 0.17733491 20 11 15.5 0.15 dme-miR-14-3p 8mer-A1 AAGACTGA 3R 25033955 25033962 - 3R_25033955_25033962_- 0.629093013 0.637132972 0.633112993 0.005685139 CG6422 FBtr0084794 25033874 25034581 3R - 25033944 25033985 3'utr CG6422 FlyBase G54490.1 ATCCAATAATTATACGTTAGTGGAAGACTGAAACAGTATAAT 9 25033966 0.957546438 2 8 46 0.75 0.954242509 0 0.222222222 0.416666667 9 3 0 9 3R:25033944-25033985 8 CG6422 FBtr0084794 25033874 25034581 AAGACTGA 8mer-A1 dme-miR-14-3p 3R - 25033944 25033979 3'utr CG6422 FlyBase G41144.1 TAATTATACGTTAGTGGAAGACTGAAACAGTATAAT 8 25033967 0.933473657 3 7 35 1 1 0.1 0.125 0.3 8 0 0 10 3R:25033944-25033979 8 8 3115 FBgn0039261 1441.73 59.75 92.00666667 0.005548889 0.133891213 0.086950221 4 5 4.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG 3R 25040529 25040535 - 3R_25040529_25040535_- 0.70215008 0.701546663 0.701848372 0.000426668 5PtaseI FBtr0299660|FBtr0299662 25040425|25040425 25040818|25040600 3R - 25040513 25040542 3'utr 5PtaseI FlyBase G54506.1 GTGTTATGTACCTGTTATGTTAAACGCGTC 18 25040536 0.736106242 4 17 181 0.947368421 1.255272505 0.842105263 0.055555556 0.105263158 18 1 0 18 3R:25040513-25040542 7 5PtaseI FBtr0299662|FBtr0299660 25040425|25040425 25040600|25040818 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 25040511 25040543 3'utr 5PtaseI FlyBase G41157.1 TGTGTTATGTACCTGTTATGTTAAACGCGTCCA 11 25040536 0.870601188 4 11 109 1 1.278753601 0.526315789 0.454545455 0.684210526 11 0 0 19 3R:25040511-25040543 7 14.5 3116 FBgn0259178 182.6666667 9.633333333 14.71333333 0.079379562 1.505190311 0.98550068 1 1 1 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 25041103 25041109 - 3R_25041103_25041109_- 0.661558564 0.66144763 0.661503097 7.85E-05 5PtaseI FBtr0299661 25041064 25041727 3R - 25041089 25041156 3'utr 5PtaseI FlyBase G54507.1 AAACTATTTCTTTGAATCTGTGTTTTAAGTATGTACATTGTTTATTATGTGTTCGTCTTCTTTAAGAA 25 25041109 0.707009066 10 22 307 0.833333333 1.397940009 0.366666667 0.16 0.3 25 5 0 25 3R:25041089-25041156 7 5PtaseI FBtr0299661 25041064 25041727 TGTGTTC 7mer-m8 dme-miR-317-3p 3R - 25041088 25041122 3'utr 5PtaseI FlyBase G41158.1 ACATTGTTTATTATGTGTTCGTCTTCTTTAAGAAA 18 25041111 0.683460874 8 14 224 0.826086957 0.801632346 0.260869565 0.166666667 0.347826087 18 2 2 19 3R:25041088-25041122 7 17 3117 FBgn0259178 182.6666667 9.633333333 14.71333333 0.093065693 1.764705882 1.15541459 0 2 1 0.15 dme-miR-276a-3p 6mer2-7 GTTCCT 3R 25041193 25041198 - 3R_25041193_25041198_- 0.968211999 0.962004001 0.965108 0.004389719 5PtaseI FBtr0299661 25041064 25041727 3R - 25041171 25041288 3'utr 5PtaseI FlyBase G54508.1 TAAATATGTCGAGCGATTGTAGTTATAATCTTAAACTCATGTGCATTTAAAAGCCATACCGAAATCTCTTATATCCATCTTATGTACCCTGTTCCTTTTCGCAGTGAAAGCGATTCAG 72 25041192 0.936389645 15 71 582 0.988636364 1.939519253 0.079545455 0.180555556 0.329545455 72 1 0 87 3R:25041171-25041288 6 5PtaseI FBtr0299661 25041064 25041727 GTTCCT 6mer2-7 dme-miR-276a-3p 3R - 25041165 25041239 3'utr 5PtaseI FlyBase G41160.1 AAAGCCATACCGAAATCTCTTATATCCATCTTATGTACCCTGTTCCTTTTCGCAGTGAAAGCGATTCAGCCTAAG 32 25041192 0.719074125 8 31 258 1 1.716003344 0.038461538 0.46875 0.673076923 32 0 0 52 3R:25041165-25041239 6 27.5 3118 FBgn0259178 182.6666667 9.633333333 14.71333333 0.150547445 2.85467128 1.869053013 -6 -6 -6 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 3R 25099527 25099533 + 3R_25099527_25099533_+ 0.54403264 0.518849949 0.531441294 0.017806858 CG33096 FBtr0301976|FBtr0301975|FBtr0114464 25099278|25099278|25099278 25099785|25099785|25099785 3R + 25099496 25099546 3'utr CG33096 FlyBase G45704.1 TTTATTCAGCCGCATCAATACATTCGAGAATTGCATTTTTTAAAAGATTAT 6 25099526 0.987448321 2 5 48 1 0.77815125 0.166666667 0 0 6 0 0 6 3R:25099496-25099546 7 CG33096 FBtr0301976|FBtr0114464|FBtr0301975 25099278|25099278|25099278 25099785|25099785|25099785 TGCATTT 7mer-m8 dme-miR-277-3p 3R + 25099491 25099541 3'utr CG33096 FlyBase G34463.1 AATTATTTATTCAGCCGCATCAATACATTCGAGAATTGCATTTTTTAAAAG 8 25099526 0.897773284 3 6 57 0.785714286 1.041392685 0.357142857 0.375 0.642857143 8 3 0 11 3R:25099491-25099541 7 5.5 3119 FBgn0053096 531.5033333 20.77333333 31.74 0.010348007 0.264762516 0.173282924 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 25099598 25099603 + 3R_25099598_25099603_+ 1 0.999996123 0.999998061 2.76E-06 CG33096 FBtr0301976|FBtr0301976|FBtr0301976|FBtr0301975|FBtr0301975|FBtr0301975|FBtr0114464|FBtr0114464|FBtr0114464 25099278|25099278|25099278|25099278|25099278|25099278|25099278|25099278|25099278 25099785|25099785|25099785|25099785|25099785|25099785|25099785|25099785|25099785 3R + 25099584 25099626 3'utr CG33096 FlyBase G45705.1 CATTCTTACAGCATTGTGATCCTGGTCCCCGTATTAATTGAAT 22 25099597 0.632671549 7 22 168 1 1.414973348 0.269230769 0.181818182 0.307692308 22 0 0 26 3R:25099584-25099626 6 CG33096 FBtr0301976|FBtr0301976|FBtr0301976|FBtr0114464|FBtr0114464|FBtr0114464|FBtr0301975|FBtr0301975|FBtr0301975 25099278|25099278|25099278|25099278|25099278|25099278|25099278|25099278|25099278 25099785|25099785|25099785|25099785|25099785|25099785|25099785|25099785|25099785 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 25099578 25099631 3'utr CG33096 FlyBase G34464.1 GATCCCCATTCTTACAGCATTGTGATCCTGGTCCCCGTATTAATTGAATAAGCA 21 25099597 0.71950174 5 19 162 0.90625 1.161368002 0.5 0.380952381 0.59375 21 2 1 29 3R:25099578-25099631 6 21 3120 FBgn0053096 531.5033333 20.77333333 31.74 0.039510571 1.010911425 0.661625709 1 1 1 0.15 dme-bantam-3p 6mer2-7 GATCTC 3R 25100329 25100334 + 3R_25100329_25100334_+ 0.662493729 0.957204557 0.809849143 0.208392076 CG33096 FBtr0344621|FBtr0344622 25099278|25099278 25102146|25102146 3R + 25100311 25100348 3'utr CG33096 FlyBase G45708.1 AAAGAGTGGCATCTAACCGATCTCTAAAGGACAGTCAA 67 25100335 0.836178027 4 60 309 0.851851852 1.236789099 0.283950617 0.164179104 0.308641975 67 9 3 69 3R:25100311-25100348 6 CG33096 FBtr0344622|FBtr0344621 25099278|25099278 25102146|25102146 GATCTC 6mer2-7 dme-bantam-3p 3R + 25100310 25100355 3'utr CG33096 FlyBase G34466.1 AAAAGAGTGGCATCTAACCGATCTCTAAAGGACAGTCAAAACGTCT 30 25100335 0.772226681 5 27 139 0.909090909 1 0.431818182 0.366666667 0.568181818 30 1 3 40 3R:25100310-25100355 6 47.5 3121 FBgn0053096 531.5033333 20.77333333 31.74 0.089369148 2.286585366 1.496534342 -6 -6 -6 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 25101960 25101967 + 3R_25101960_25101967_+ 0.625337739 0.625347852 0.625342795 7.21E-06 CG33095 FBtr0100204|FBtr0084774 25101745|25101745 25102146|25102146 3R + 25101921 25101979 3'utr CG33095 FlyBase G45710.1 TTTAGTAGTACCTTAAGTTTGAAATTTTTACAGTGATTTTGCATTTATATTAAGTAACA 34 25101959 0.991963354 7 34 383 1 1.633468456 0.046511628 0.264705882 0.418604651 34 0 0 43 3R:25101921-25101979 8 CG33095 FBtr0084774|FBtr0100204 25101745|25101745 25102146|25102146 TGCATTTA 8mer-A1 dme-miR-277-3p 3R + 25101935 25101978 3'utr CG33095 FlyBase G34468.1 AAGTTTGAAATTTTTACAGTGATTTTGCATTTATATTAAGTAAC 29 25101959 0.716080602 6 28 311 0.97826087 1.653212514 0.043478261 0.310344828 0.565217391 29 1 0 45 3R:25101935-25101978 8 31 3122 FBgn0053095 476.96 16.58 25.46 0.064994968 1.869722557 1.217596229 1 1 1 0.15 dme-miR-932-5p 6mer2-7 GAATTG 3R 25233718 25233723 - 3R_25233718_25233723_- 0.797663417 0.767080261 0.782371839 0.021625517 CG10420 FBtr0084870 25233634 25234044 3R - 25233701 25233735 3'utr CG10420 FlyBase G54596.1 TTGTATGCTACAGAATTGTTCTCCAAACAGATTAT 40 25233720 0.77147291 3 39 241 0.983050847 1.462397998 0.271186441 0.35 0.559322034 40 0 1 58 3R:25233701-25233735 6 CG10420 FBtr0084870 25233634 25234044 GAATTG 6mer2-7 dme-miR-932-5p 3R - 25233703 25233735 3'utr CG10420 FlyBase G41213.1 TTGTATGCTACAGAATTGTTCTCCAAACAGATT 18 25233720 0.786524585 2 18 120 1 1.397940009 0.28 0.333333333 0.52 18 0 0 25 3R:25233703-25233735 6 29 3123 FBgn0039296 113.6666667 7.593333333 11.63333333 0.255131965 3.819139596 2.492836676 -3 -3 -3 0.15 dme-miR-11-3p 7mer-m1 TGTGATG 3R 25233928 25233934 - 3R_25233928_25233934_- 0.601334133 0.60458298 0.602958557 0.002297319 CG10420 FBtr0084870 25233634 25234044 3R - 25233811 25233994 3'utr CG10420 FlyBase G54597.1 TGAGTTGGAATGAAATTCGCAGCCAAACCATAGAATACGATAGCTAAGATGCCAAGTACTTGTGATGCAAAAATAATGCTCTTTGTCATTAACTTAGGATAGCAATCAATCATGCCAAACATCTACAGGATTTTCGTTATCAAATATAGTCTCTTACTTAAGATTATTTTAAGTGTGATTTTTT 198 25233935 0.876666322 33 186 1262 0.918803419 1.429348473 0.179487179 0.136363636 0.269230769 198 12 7 215 3R:25233811-25233994 7 CG10420 FBtr0084870 25233634 25234044 TGTGATG 7mer-m1 dme-miR-11-3p 3R - 25233820 25233996 3'utr CG10420 FlyBase G41214.1 GCTGAGTTGGAATGAAATTCGCAGCCAAACCATAGAATACGATAGCTAAGATGCCAAGTACTTGTGATGCAAAAATAATGCTCTTTGTCATTAACTTAGGATAGCAATCAATCATGCCAAACATCTACAGGATTTTCGTTATCAAATATAGTCTCTTACTTAAGATTATTTTAAGTG 124 25233935 0.93320124 19 113 751 0.944723618 1.496006599 0.190954774 0.427419355 0.64321608 124 6 5 188 3R:25233820-25233996 7 116.5 3124 FBgn0039296 113.6666667 7.593333333 11.63333333 1.024926686 15.34240562 10.01432665 1 1 1 0.15 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 25260357 25260362 + 3R_25260357_25260362_+ 0.999999879 0.999731146 0.999865512 0.00019007 CG11857 FBtr0084814 25260035 25260759 3R + 25260330 25260401 3'utr CG11857 FlyBase G45796.1 CACTGTTGAGTTGTCGTACGGCGTCTTGTGCAAAATACCTTGTTTATTGTTTAATCTAACTGCTTGTTTAAA 30 25260356 0.899577833 12 29 245 1 1.556302501 0.055555556 0.133333333 0.277777778 30 0 0 36 3R:25260330-25260401 6 CG11857 FBtr0084814 25260035 25260759 GTGCAA 6mer3-8 dme-miR-92b-3p 3R + 25260329 25260403 3'utr CG11857 FlyBase G34546.1 TCACTGTTGAGTTGTCGTACGGCGTCTTGTGCAAAATACCTTGTTTATTGTTTAATCTAACTGCTTGTTTAAATT 35 25260355 0.738979637 11 29 279 0.795918367 1.290034611 0.020408163 0.285714286 0.489795918 35 9 1 39 3R:25260329-25260403 6 25.5 3125 FBgn0039303 1484.506667 100.39 153.7466667 0.017177424 0.254009363 0.165857254 1 2 1.5 0.15 dme-miR-12-5p 6mer3-8 AATACT 3R 25260455 25260460 + 3R_25260455_25260460_+ 0.99999986 1 0.99999993 7.07E-08 CG11857 FBtr0084814 25260035 25260759 3R + 25260424 25260488 3'utr CG11857 FlyBase G45797.1 TCTATCTATTGTAAATCCCAAACGATACCGAAATACTGCAGATCAGCTCTAATTTAGTTTTTCAT 35 25260449 0.923555346 7 33 215 0.952380952 1.602059991 0.166666667 0.171428571 0.30952381 35 2 0 40 3R:25260424-25260488 6 CG11857 FBtr0084814 25260035 25260759 AATACT 6mer3-8 dme-miR-12-5p 3R + 25260434 25260489 3'utr CG11857 FlyBase G34547.1 GTAAATCCCAAACGATACCGAAATACTGCAGATCAGCTCTAATTTAGTTTTTCATC 17 25260457 0.70451467 5 16 85 0.958333333 1.361727836 0.041666667 0.352941176 0.541666667 17 1 0 23 3R:25260434-25260489 6 23.5 3126 FBgn0039303 1484.506667 100.39 153.7466667 0.015830175 0.23408706 0.152848842 6 -2 2 0.15 dme-miR-932-5p 7mer-A1 GAATTGA 3R 25260689 25260695 + 3R_25260689_25260695_+ 0.640575629 0.624516021 0.632545825 0.011355852 CG11857 FBtr0084814 25260035 25260759 3R + 25260676 25260710 3'utr CG11857 FlyBase G45799.1 GTTAAAAAAAGGCGAATTGAAAACTGAAACTATAG 23 25260693 0.944898103 3 18 51 0.962962963 1.414973348 0.074074074 0.173913043 0.296296296 23 1 0 26 3R:25260676-25260710 7 CG11857 FBtr0084814 25260035 25260759 GAATTGA 7mer-A1 dme-miR-932-5p 3R + 25260678 25260733 3'utr CG11857 FlyBase G34549.1 TAAAAAAAGGCGAATTGAAAACTGAAACTATAGGAAGTGTACACTGGGTGCGTCTT 29 25260693 0.945472052 6 27 123 0.901960784 1.662757832 0.058823529 0.517241379 0.725490196 29 5 0 46 3R:25260678-25260733 7 16.5 3127 FBgn0039303 1484.506667 100.39 153.7466667 0.011114804 0.164359 0.1073194 -4 -4 -4 0.15 dme-miR-8-3p 6mer2-7 AGTATT 3R 25261224 25261229 - 3R_25261224_25261229_- 0.999999956 0.999999526 0.999999741 3.54E-07 CG10425 FBtr0084867 25260961 25261255 3R - 25261203 25261247 3'utr CG10425 FlyBase G54611.1 TTGTCCCGCTGCCCTTAAAGTATTCCCAAGTGCCCATAATTAAAT 13 25261226 0.620116571 7 12 86 0.923076923 1.079181246 0.076923077 0 0 13 1 0 12 3R:25261203-25261247 6 CG10425 FBtr0084867 25260961 25261255 AGTATT 6mer2-7 dme-miR-8-3p 3R - 25261202 25261269 stop_codon CG10425 FlyBase G41225.1 TGGAGTCCAAGTGAAATCTCTCTTGTCCCGCTGCCCTTAAAGTATTCCCAAGTGCCCATAATTAAATC 12 25261225 0.984016065 5 10 76 0.851851852 1.361727836 0.407407407 0.833333333 0.925925926 12 4 0 23 3R:25261202-25261269 6 11 3128 FBgn0039304 196.3333333 17.07333333 25.98666667 0.056027165 0.644279578 0.423293997 -3 -4 -3.5 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 25303944 25303951 + 3R_25303944_25303951_+ 0.499417566 0.499227163 0.499322364 0.000134633 CG31370 FBtr0290055 25303865 25303986 3R + 25303926 25303984 3'utr CG31370 FlyBase G45812.1 ATGAGCGTTCCATTATATGTACTTAATAAAGTGTATAAGGCTATTGTTTTGATATCGCT 20 25303943 0.933594614 3 17 182 0.88 1.041392685 0.32 0.25 0.4 20 2 1 22 3R:25303926-25303984 8 CG31370 FBtr0290055 25303865 25303986 GTACTTAA 8mer-A1 dme-miR-252-5p 3R + 25303927 25303973 3'utr CG31370 FlyBase G34556.1 TGAGCGTTCCATTATATGTACTTAATAAAGTGTATAAGGCTATTGTT 18 25303943 0.765026138 3 17 153 0.914285714 1.505149978 0.314285714 0.555555556 0.771428571 18 3 0 32 3R:25303927-25303973 8 15.5 3129 FBgn0051370 220 19.25 29.63 0.070454545 0.805194805 0.523118461 1 1 1 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3R 25331532 25331538 - 3R_25331532_25331538_- 0.521056144 0.521135259 0.521095701 5.60E-05 CG10669 FBtr0300687 25331361 25331774 3R - 25331507 25331559 3'utr CG10669 FlyBase G54646.1 TAATAAATTAAAACAATACTGTGTGATTAAAAGGGGAATAGTTTGTAGTTTGT 29 25331540 0.722624947 6 27 190 0.939393939 1.491361694 0.090909091 0.137931034 0.242424242 29 2 0 31 3R:25331507-25331559 7 CG10669 FBtr0300687 25331361 25331774 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 25331508 25331556 3'utr CG10669 FlyBase G41251.1 TAAATTAAAACAATACTGTGTGATTAAAAGGGGAATAGTTTGTAGTTTG 19 25331540 0.972831485 4 16 140 0.791666667 1.278753601 0.083333333 0.263157895 0.416666667 19 5 0 19 3R:25331508-25331556 7 22.5 3130 FBgn0039329 90.66666667 3.293333333 4.993333333 0.248161765 6.831983806 4.506008011 2 2 2 0.15 dme-miR-988-3p 7mer-m8 ACAAGGG 3R 25340067 25340073 + 3R_25340067_25340073_+ 0.671734422 0.669931221 0.670832822 0.001275055 CG11902 FBtr0300735 25339910 25340088 3R + 25340055 25340087 3'utr CG11902 FlyBase G45830.1 AAAAATAAAATTACAAGGGTTACAAATAAACGA 12 25340074 0.758450375 2 12 50 1 1.176091259 0 0.166666667 0.333333333 12 0 0 15 3R:25340055-25340087 7 CG11902 FBtr0300735 25339910 25340088 ACAAGGG 7mer-m8 dme-miR-988-3p 3R + 25340044 25340084 3'utr CG11902 FlyBase G34568.1 AATGTAAAGATAAAAATAAAATTACAAGGGTTACAAATAAA 18 25340074 0.946825159 2 18 78 1 1.361727836 0 0.222222222 0.391304348 18 0 0 23 3R:25340044-25340084 7 15 3131 FBgn0028647 178 4.693333333 7.203333333 0.084269663 3.196022727 2.082369273 -7 -7 -7 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3R 25350214 25350220 - 3R_25350214_25350220_- 0.521223763 0.366878313 0.444051038 0.10913875 Fur1 FBtr0336805 25349196 25352006 3R - 25350200 25350283 3'utr Fur1 FlyBase G54658.1 TCGGAACTAAGTACAAACTATTAGTTTACTTAACAAATTCTATACAAAATTACTTATCTCCTTTGTGATTTATATTTCTATTTT 34 25350214 0.992554955 10 33 383 0.976744186 1.62324929 0 0.264705882 0.418604651 34 1 0 42 3R:25350200-25350283 7 Fur1 FBtr0336805 25349196 25352006 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 25350200 25350232 3'utr Fur1 FlyBase G41258.2 ACTTATCTCCTTTGTGATTTATATTTCTATTTT 13 25350214 0.746988941 2 12 157 0.95 1.278753601 0 0.461538462 0.65 13 1 0 19 3R:25350200-25350232 7 21 3132 FBgn0004509 573.7666667 14.10666667 21.43 0.036600244 1.488657845 0.979934671 -6 -6 -6 0.15 dme-miR-14-3p 7mer-m8 AAGACTG 3R 25350907 25350913 - 3R_25350907_25350913_- 0.669814332 0.563430403 0.616622367 0.075224777 Fur1 FBtr0336805 25349196 25352006 3R - 25350890 25350933 3'utr Fur1 FlyBase G54659.1 CAGTTTAGAGTTCATAGTAAAAGACTGTTTCTTAAAATTAAAAC 8 25350905 0.841280557 6 8 67 1 0.903089987 0.125 0 0 8 0 0 8 3R:25350890-25350933 7 Fur1 FBtr0336805 25349196 25352006 AAGACTG 7mer-m8 dme-miR-14-3p 3R - 25350888 25350934 3'utr Fur1 FlyBase G41260.1 GCAGTTTAGAGTTCATAGTAAAAGACTGTTTCTTAAAATTAAAACCA 6 25350905 0.701270268 4 6 59 1 1 0.3 0.333333333 0.6 6 0 0 10 3R:25350888-25350934 7 6.5 3133 FBgn0004509 573.7666667 14.10666667 21.43 0.011328647 0.460775047 0.303313112 -8 -8 -8 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 25486395 25486401 - 3R_25486395_25486401_- 0.640868611 0.656427118 0.648647864 0.011001521 Dhap-at FBtr0084897|FBtr0330374 25485616|25485616 25486603|25486603 3R - 25486306 25486425 3'utr Dhap-at FlyBase G54700.1 TCATCGTGGTGTTGTCGCCGCTGTGGCAGCTGCTCCACTGGATCATCGTATCCACCCACTCATTCACGTAGGTTAACGGGGTGTCTGGTTAGGATGGGTCGATACTAATAGTATCCTATT 16 25486402 0.982202586 6 14 111 0.857142857 0.954242509 0.047619048 0.25 0.428571429 16 2 1 18 3R:25486306-25486425 7 Dhap-at FBtr0330374|FBtr0084897 25485616|25485616 25486603|25486603 GGCAGCT 7mer-m8 dme-miR-980-3p 3R - 25486343 25486423 3'utr Dhap-at FlyBase G41290.1 ATCGTGGTGTTGTCGCCGCTGTGGCAGCTGCTCCACTGGATCATCGTATCCACCCACTCATTCACGTAGGTTAACGGGGTG 14 25486402 0.972233932 6 14 85 1 1.176091259 0.133333333 0.071428571 0.133333333 14 0 0 15 3R:25486343-25486423 7 10.5 3134 FBgn0040212 241.5966667 8.49 13.08666667 0.043460865 1.236749117 0.802343352 1 1 1 0.15 dme-miR-14-3p 7mer-m8 AAGACTG 3R 25493192 25493198 + 3R_25493192_25493198_+ 0.670424412 0.670297108 0.67036076 9.00E-05 CG5112 FBtr0084878 25493128 25493262 3R + 25493133 25493204 3'utr CG5112 FlyBase G45851.1 GTTTATGATGTATGATCGATCAACTTATTGTTAGAGAACATAGGGTGTGGGTAACGCTGAAGACTGTCGCTT 33 25493190 0.970304922 10 30 174 0.918918919 1.531478917 0.378378378 0.090909091 0.189189189 33 3 0 34 3R:25493133-25493204 7 CG5112 FBtr0084878 25493128 25493262 AAGACTG 7mer-m8 dme-miR-14-3p 3R + 25493136 25493204 3'utr CG5112 FlyBase G34581.1 TATGATGTATGATCGATCAACTTATTGTTAGAGAACATAGGGTGTGGGTAACGCTGAAGACTGTCGCTT 30 25493190 0.966748859 10 30 163 1 1.602059991 0.25 0.3 0.475 30 0 0 40 3R:25493136-25493204 7 25 3135 FBgn0039341 334.3133333 22.37333333 33.99666667 0.074780146 1.117401669 0.735366212 2 2 2 0.15 dme-miR-304-5p 8mer-A1 TGAGATTA 3R 25493955 25493962 - 3R_25493955_25493962_- 0.625326717 0.625335374 0.625331046 6.15E-06 CG33494 FBtr0089607|FBtr0336802 25493577|25493479 25494014|25494014 3R - 25493909 25494021 stop_codon CG33494 FlyBase G54708.1 TGGGTAACCAGTTCCAAAGTCCACTTAGTCTTTGCTCTCGAATCGGTCATCCAAGCCTTTGAGATTACATTTAAATATGTCATGAAATACATAGCATGATATACATACATATA 64 25493963 0.9826232 14 60 522 0.930555556 1.826074803 0.125 0.109375 0.208333333 64 5 0 67 3R:25493909-25494021 8 CG33494 FBtr0336802|FBtr0089607 25493479|25493577 25494014|25494014 TGAGATTA 8mer-A1 dme-miR-304-5p 3R - 25493947 25494006 3'utr CG33494 FlyBase G41296.1 AAAGTCCACTTAGTCTTTGCTCTCGAATCGGTCATCCAAGCCTTTGAGATTACATTTAAA 25 25493963 0.763605717 8 22 199 0.921052632 1.243038049 0.131578947 0.4 0.605263158 25 2 1 35 3R:25493947-25494006 8 32 3136 FBgn0053494 1664.706667 279.3966667 423.6866667 0.019222606 0.114532505 0.075527512 1 1 1 0.15 dme-miR-8-3p 7mer-A1 AGTATTA 3R 25600961 25600967 + 3R_25600961_25600967_+ 0.823310514 0.823086018 0.823198266 0.000158745 msi FBtr0305219|FBtr0333664|FBtr0084881|FBtr0333665|FBtr0084882|FBtr0333663|FBtr0305218 25600746|25600746|25600746|25600746|25600746|25600746|25600746 25601136|25608423|25601136|25601136|25602421|25601136|25601136 3R + 25600901 25600982 5'utr msi FlyBase G45863.1 GAAGTTGGTTTTCCTTTGAGTTTGGCTAAGTTAGTAGTCCGATACACGGAAGGCAAATTAAGTATTATATTTAAGGCGCCCT 20 25600958 0.916346268 9 19 162 0.956521739 1.342422681 0.304347826 0.15 0.260869565 20 1 0 22 3R:25600901-25600982 7 msi FBtr0333663|FBtr0305218|FBtr0084882|FBtr0084881|FBtr0333665|FBtr0305219|FBtr0333664 25600746|25600746|25600746|25600746|25600746|25600746|25600746 25601136|25601136|25602421|25601136|25601136|25601136|25608423 AGTATTA 7mer-A1 dme-miR-8-3p 3R + 25600914 25600972 5'utr msi FlyBase G34587.1 CTTTGAGTTTGGCTAAGTTAGTAGTCCGATACACGGAAGGCAAATTAAGTATTATATTT 7 25600958 0.899608728 6 7 52 1 1.113943352 0.076923077 0.571428571 0.769230769 7 0 0 13 3R:25600914-25600972 7 7 3137 FBgn0011666 1019.796667 32.88 50.09666667 0.006864113 0.212895377 0.139729856 3 3 3 0.15 dme-miR-988-3p 6mer2-7 CAAGGG 3R 25601441 25601446 + 3R_25601441_25601446_+ 0.826184895 0.938405132 0.882295014 0.079351664 msi FBtr0333664|FBtr0084882 25600746|25600746 25608423|25602421 3R + 25601401 25601460 3'utr msi FlyBase G45867.1 TGGAGCCCTAAACTCAGCTGAAATGAATGAGAAACTCCTGCAAGGGCAGTATTAATTAAT 31 25601437 0.973190069 8 27 166 0.875 1.447158031 0 0.032258065 0.0625 31 4 0 28 3R:25601401-25601460 6 msi FBtr0084882|FBtr0333664 25600746|25600746 25602421|25608423 CAAGGG 6mer2-7 dme-miR-988-3p 3R + 25601412 25601469 3'utr msi FlyBase G34589.1 ACTCAGCTGAAATGAATGAGAAACTCCTGCAAGGGCAGTATTAATTAATTGAATGAAA 19 25601436 0.853622635 7 16 111 0.791666667 1.278753601 0 0.263157895 0.416666667 19 5 0 19 3R:25601412-25601469 6 23 3138 FBgn0011666 1019.796667 32.88 50.09666667 0.022553516 0.699513382 0.459112383 4 5 4.5 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 25601698 25601705 + 3R_25601698_25601705_+ 0.500101849 0.500112763 0.500107306 7.78E-06 msi FBtr0333664|FBtr0084882 25600746|25600746 25608423|25602421 3R + 25601676 25601729 3'utr msi FlyBase G45869.1 CTATCTACCCAAATCTGTTATTGTACTTAATTATATAACAATTACAAATACCAC 38 25601697 0.760864444 5 38 424 1 1.681241237 0.020833333 0.184210526 0.354166667 38 0 0 48 3R:25601676-25601729 8 msi FBtr0084882|FBtr0333664 25600746|25600746 25602421|25608423 GTACTTAA 8mer-A1 dme-miR-252-5p 3R + 25601668 25601720 3'utr msi FlyBase G34590.1 CCTACCTTCTATCTACCCAAATCTGTTATTGTACTTAATTATATAACAATTAC 24 25601697 0.956187348 5 24 260 1 1.579783597 0 0.375 0.605263158 24 0 0 38 3R:25601668-25601720 8 30 3139 FBgn0011666 1019.796667 32.88 50.09666667 0.029417629 0.912408759 0.598842238 1 1 1 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 3R 25602762 25602769 + 3R_25602762_25602769_+ 0.643144742 0.642513239 0.64282899 0.000446538 msi FBtr0333664 25600746 25608423 3R + 25602742 25602788 3'utr msi FlyBase G45874.1 AATGTAATATTGTTTCGTATACCAAAGATAACGCATATTAACCCAAA 71 25602761 0.877322409 4 64 465 0.913043478 1.924279286 0.163043478 0.197183099 0.380434783 71 8 0 84 3R:25602742-25602788 8 msi FBtr0333664 25600746 25608423 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 25602721 25602784 3'utr msi FlyBase G34593.1 TTCGACTCGGGGGGTGAGTATAATGTAATATTGTTTCGTATACCAAAGATAACGCATATTAACC 54 25602761 0.977073429 4 51 335 0.933333333 1.84509804 0.173333333 0.277777778 0.48 54 5 0 70 3R:25602721-25602784 8 61.5 3140 FBgn0011666 1019.796667 32.88 50.09666667 0.060306139 1.870437956 1.227626589 1 1 1 0.15 dme-miR-263a-5p 8mer-m1 GTGCCATT 3R 25602908 25602915 + 3R_25602908_25602915_+ 0.536735907 0.455651899 0.496193903 0.057335046 msi FBtr0333664 25600746 25608423 3R + 25602803 25602924 3'utr msi FlyBase G45875.1 GCTGGGCCTAAGTCGAGGCTCAAATACCACATCTCCATTTGCAGAAACTAATTTATTTATTTATTATTTACGCTTAAGAATCTAACACATTCCAGACATGCTATGGTGCCATTTACTTATCC 35 25602906 0.951635923 12 34 266 0.976190476 1.612783857 0.023809524 0.171428571 0.30952381 35 1 0 41 3R:25602803-25602924 8 msi FBtr0333664 25600746 25608423 GTGCCATT 8mer-m1 dme-miR-263a-5p 3R + 25602857 25602916 3'utr msi FlyBase G34594.1 ATTTATTTATTATTTACGCTTAAGAATCTAACACATTCCAGACATGCTATGGTGCCATTT 19 25602906 0.715734264 6 19 127 1 1.431363764 0 0.315789474 0.518518519 19 0 0 27 3R:25602857-25602916 8 16 3141 FBgn0011666 1019.796667 32.88 50.09666667 0.015689402 0.486618005 0.319382527 2 2 2 0.15 dme-bantam-3p 6mer2-7 GATCTC 3R 25602961 25602966 + 3R_25602961_25602966_+ 0.863412467 0.95303889 0.908225678 0.063375435 msi FBtr0333664 25600746 25608423 3R + 25602943 25603021 3'utr msi FlyBase G45876.1 TTTTTAACTCGTCTGTCAGATCTCGATCTCAGAACAATTGCTTTTAGCATAAGGTTGATTTTACCCTGCCAATCCAAGA 46 25602964 0.780918125 10 41 292 0.903225806 1.748188027 0.016129032 0.282608696 0.467741935 46 6 0 56 3R:25602943-25603021 6 msi FBtr0333664 25600746 25608423 GATCTC 6mer2-7 dme-bantam-3p 3R + 25602947 25602999 3'utr msi FlyBase G34595.1 TAACTCGTCTGTCAGATCTCGATCTCAGAACAATTGCTTTTAGCATAAGGTTG 30 25602964 0.660960243 11 28 194 0.921052632 1.06694679 0.210526316 0.233333333 0.394736842 30 1 2 35 3R:25602947-25602999 6 32 3142 FBgn0011666 1019.796667 32.88 50.09666667 0.031378804 0.97323601 0.638765054 -3 -3 -3 0.15 dme-miR-33-5p 6mer2-7 AATGCA 3R 25653206 25653211 - 3R_25653206_25653211_- 0.782422334 0.65674536 0.719583847 0.088866988 Tnks FBtr0330383|FBtr0084890 25653089|25653089 25653514|25654531 3R - 25653198 25653236 3'utr Tnks FlyBase G54731.1 CGAGGTTACAAGTTCTTTGCCGATGAATGCATTACATTA 9 25653213 0.968433525 5 8 64 0.888888889 0.903089987 0 0 0 9 1 0 8 3R:25653198-25653236 6 Tnks FBtr0330383|FBtr0084890 25653089|25653089 25653514|25654531 AATGCA 6mer2-7 dme-miR-33-5p 3R - 25653198 25653241 3'utr Tnks FlyBase G41316.1 TTATACGAGGTTACAAGTTCTTTGCCGATGAATGCATTACATTA 8 25653205 0.866970566 4 8 62 1 1.146128036 0.071428571 0.375 0.642857143 8 0 0 14 3R:25653198-25653241 6 7 3143 FBgn0027508 387.6333333 8.48 12.93666667 0.018058303 0.825471698 0.541097655 2 -6 -2 0.15 dme-bantam-3p 7mer-m8 TGATCTC 3R 25653482 25653488 - 3R_25653482_25653488_- 0.661607239 0.661609428 0.661608334 1.56E-06 Tnks FBtr0330383|FBtr0084890 25653089|25653089 25653514|25654531 3R - 25653430 25653522 stop_codon Tnks FlyBase G54733.1 AGTTGTGACGGTGGTACGACATGCTGGTGGTTATTGATCTCTATGTCTCCGTTGGCCTCCCGTCTATTTTATTACAATTACTAGCTATAGATG 352 25653489 0.713909296 21 327 3618 0.926108374 2.274157849 0.201970443 0.136363636 0.251231527 352 29 1 376 3R:25653430-25653522 7 Tnks FBtr0330383|FBtr0084890 25653089|25653089 25653514|25654531 TGATCTC 7mer-m8 dme-bantam-3p 3R - 25653448 25653518 stop_codon Tnks FlyBase G41319.1 GTGACGGTGGTACGACATGCTGGTGGTTATTGATCTCTATGTCTCCGTTGGCCTCCCGTCTATTTTATTAC 233 25653489 0.663587543 15 213 2298 0.933884298 1.928139707 0.201101928 0.407725322 0.619834711 233 21 3 339 3R:25653448-25653518 7 262.5 3144 FBgn0027508 387.6333333 8.48 12.93666667 0.677186344 30.95518868 20.29116207 1 1 1 0.15 dme-miR-33-5p 6mer3-8 CAATGC 3R 25653600 25653605 - 3R_25653600_25653605_- 0.991820227 0.999915576 0.995867901 0.005724312 Tnks FBtr0084890 25653089 25654531 3R - 25653553 25653675 3'utr Tnks FlyBase G54734.1 GAGCCGGGCACGGGAATGCTCCGTACAGCAGCTCGCTGCAACATCATCGACTAAGACGCTGTTCGTCGTACAATGCGGAGAATGCCTACGAGCACTTTGCGGCCCCCTTCAAGGCGCGCAAGA 12 25653593 0.943599686 8 11 45 1 1.041392685 0.272727273 0 0 11 0 0 11 3R:25653553-25653675 6 Tnks FBtr0084890 25653089 25654531 CAATGC 6mer3-8 dme-miR-33-5p 3R - 25653567 25653623 3'utr Tnks FlyBase G41320.1 AAGACGCTGTTCGTCGTACAATGCGGAGAATGCCTACGAGCACTTTGCGGCCCCCTT 8 25653593 0.950260607 3 6 28 0.818181818 0.954242509 0 0.25 0.454545455 8 2 0 9 3R:25653567-25653623 6 5 3145 FBgn0027508 387.6333333 8.48 12.93666667 0.012898788 0.589622642 0.386498325 -12 -12 -12 0.15 dme-bantam-3p 6mer2-7 GATCTC 3R 25664877 25664882 + 3R_25664877_25664882_+ 0.991091359 0.994081704 0.992586531 0.002114461 RASSF8 FBtr0084898 25664654 25665640 3R + 25664850 25664976 3'utr RASSF8 FlyBase G45891.1 ATGTTTACATTCCAATCACACTCTATGGATCTCTCAATGCAATGATATATGTTACAAATTTGAAATCACAATCGTTTTATTACTCTACATTCCGCACTGTACTTTGTATTTAATAGTAGTTAATGAG 460 25664873 0.731628957 19 451 3253 0.981718464 2.42894429 0.219378428 0.169565217 0.301645338 460 9 1 537 3R:25664850-25664976 6 RASSF8 FBtr0084898 25664654 25665640 GATCTC 6mer2-7 dme-bantam-3p 3R + 25664855 25664912 3'utr RASSF8 FlyBase G34608.1 TACATTCCAATCACACTCTATGGATCTCTCAATGCAATGATATATGTTACAAATTTGA 266 25664873 0.733875348 8 259 1826 0.9825 2.117271296 0.1825 0.383458647 0.59 266 5 2 393 3R:25664855-25664912 6 347 3146 FBgn0261986 768.6366667 27.28 42.04333333 0.451448669 12.71994135 8.25338936 4 4 4 0.15 dme-miR-252-5p 8mer-m1 GTACTTAG 3R 25665245 25665252 + 3R_25665245_25665252_+ 0.632098768 0.635128742 0.633613755 0.002142463 RASSF8 FBtr0084898 25664654 25665640 3R + 25665211 25665295 3'utr RASSF8 FlyBase G45893.1 TAGAATTCACAATTCGAATTACACAAAACTTATTGTACTTAGCAATTAGCGCAGCTTTAAAAAAACAAATTAGCAATGCTTTGTT 13 25665244 0.971758721 7 13 78 1 1.204119983 0.0625 0.153846154 0.3125 13 0 0 16 3R:25665211-25665295 8 RASSF8 FBtr0084898 25664654 25665640 GTACTTAG 8mer-m1 dme-miR-252-5p 3R + 25665233 25665275 3'utr RASSF8 FlyBase G34611.1 ACAAAACTTATTGTACTTAGCAATTAGCGCAGCTTTAAAAAAA 7 25665243 0.761161954 4 7 41 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 3R:25665233-25665275 8 7.5 3147 FBgn0261986 768.6366667 27.28 42.04333333 0.009757536 0.274926686 0.178387378 1 2 1.5 0.15 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 25665488 25665493 + 3R_25665488_25665493_+ 0.513004274 0.645647088 0.579325681 0.093792623 RASSF8 FBtr0084898 25664654 25665640 3R + 25665466 25665538 3'utr RASSF8 FlyBase G45894.1 ATTTAATATTTACACAAACTGATGATGATAGTGAACTACAAAACACCAACGGAAATGCAATTTATCGAATATT 36 25665486 0.827785411 10 34 174 0.951219512 1.591064607 0.073170732 0.138888889 0.243902439 36 2 0 39 3R:25665466-25665538 6 RASSF8 FBtr0084898 25664654 25665640 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R + 25665466 25665541 3'utr RASSF8 FlyBase G34612.1 ATTTAATATTTACACAAACTGATGATGATAGTGAACTACAAAACACCAACGGAAATGCAATTTATCGAATATTATA 34 25665488 0.91705824 8 32 165 0.957446809 1.653212514 0.170212766 0.294117647 0.489361702 34 2 0 45 3R:25665466-25665541 6 21.5 3148 FBgn0261986 768.6366667 27.28 42.04333333 0.027971603 0.788123167 0.511377151 2 0 1 0.15 dme-miR-7-5p 6mer3-8 GTCTTC 3R 25679281 25679286 + 3R_25679281_25679286_+ 0.993525534 0.993546426 0.99353598 1.48E-05 CG5039 FBtr0084900 25679239 25679529 3R + 25679224 25679335 stop_codon CG5039 FlyBase G45896.1 ACGCCTCCAATGCCTAGTGAATCTCAAAAGTCTTCCATACACTTTATTGTCCACGTTGTCTTCAAACGGTGGTTGTCATCGGTTTAGTTACTACTGCAAACTACGTGCCTCT 45 25679279 0.983528738 8 42 330 0.962962963 1.414973348 0.203703704 0.2 0.333333333 45 1 1 52 3R:25679224-25679335 6 CG5039 FBtr0084900 25679239 25679529 GTCTTC 6mer3-8 dme-miR-7-5p 3R + 25679223 25679323 stop_codon CG5039 FlyBase G34614.1 AACGCCTCCAATGCCTAGTGAATCTCAAAAGTCTTCCATACACTTTATTGTCCACGTTGTCTTCAAACGGTGGTTGTCATCGGTTTAGTTACTACTGCAAA 31 25679279 0.824513547 7 30 244 0.977272727 1.633468456 0.318181818 0.322580645 0.522727273 31 1 0 43 3R:25679223-25679323 6 18 3149 FBgn0039356 51.46666667 9.296666667 14.23333333 0.349740933 1.936177842 1.264637002 2 2 2 0.15 dme-miR-317-3p 8mer-A1 TGTGTTCA 3R 25683350 25683357 + 3R_25683350_25683357_+ 0.630406847 0.631087995 0.630747421 0.000481681 CG5028 FBtr0113289 25683087 25683780 3R + 25683310 25683381 3'utr CG5028 FlyBase G45907.2 AACCCAAACAAAATATGTTACCCCGGCTAAATGTCCATTGTGTGTTCATTCGATGTCCAAGTGTGATAATTC 12 25683348 0.916947305 9 11 80 0.866666667 1.113943352 0.2 0.166666667 0.333333333 12 2 0 13 3R:25683310-25683381 8 CG5028 FBtr0113289 25683087 25683780 TGTGTTCA 8mer-A1 dme-miR-317-3p 3R + 25683332 25683383 3'utr CG5028 FlyBase G34623.1 CCGGCTAAATGTCCATTGTGTGTTCATTCGATGTCCAAGTGTGATAATTCAG 8 25683348 0.778352957 5 8 69 1 1 0.5 0.25 0.4 8 0 0 10 3R:25683332-25683383 8 6 3150 FBgn0039358 738.9366667 46.93 71.87666667 0.008119776 0.127849989 0.083476325 2 2 2 0.15 dme-miR-276a-3p 6mer2-7 GTTCCT 3R 25698848 25698853 - 3R_25698848_25698853_- 0.99950317 0.999368009 0.99943559 9.56E-05 LpR2 FBtr0113387|FBtr0113385|FBtr0113384 25698725|25698725|25698725 25699984|25699984|25699984 3R - 25698791 25698874 3'utr LpR2 FlyBase G54761.1 AATGTGTATTGGCAATTTTTGGTTCCTGTAAAATGTATTTTAATTTAAGCATGAAAAGTATTTGCTTTAATGCTTTTTTGAAAC 55 25698855 0.993485907 10 50 625 0.898305085 1.423245874 0.152542373 0.072727273 0.13559322 55 5 1 53 3R:25698791-25698874 6 LpR2 FBtr0113387|FBtr0113385|FBtr0113384 25698725|25698725|25698725 25699984|25699984|25699984 GTTCCT 6mer2-7 dme-miR-276a-3p 3R - 25698801 25698874 3'utr LpR2 FlyBase G41345.1 AATGTGTATTGGCAATTTTTGGTTCCTGTAAAATGTATTTTAATTTAAGCATGAAAAGTATTTGCTTTAATGCT 47 25698855 0.991830186 7 46 513 0.985294118 1.826074803 0.102941176 0.382978723 0.573529412 47 1 0 67 3R:25698801-25698874 6 48.5 3151 FBgn0051092 94.66666667 3.816666667 5.916666667 0.512323944 12.70742358 8.197183099 2 2 2 0.15 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 25699011 25699017 - 3R_25699011_25699017_- 0.734073555 0.727143764 0.73060866 0.004900109 LpR2 FBtr0113387|FBtr0113385|FBtr0113384 25698725|25698725|25698725 25699984|25699984|25699984 3R - 25698949 25699045 3'utr LpR2 FlyBase G54762.1 TTTCTTTCTTGGGTATTCAAAACAATTTGCTGTGATCAGTTTAAAAGCATTAGACCTGCATTAAATCATCTTATTCGTAGTGATTTTACTATTCTTC 537 25699019 0.773574578 19 522 4419 0.969984202 1.788168371 0.120063191 0.143389199 0.273301738 537 10 9 614 3R:25698949-25699045 7 LpR2 FBtr0113387|FBtr0113385|FBtr0113384 25698725|25698725|25698725 25699984|25699984|25699984 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R - 25698908 25699044 3'utr LpR2 FlyBase G41346.1 TTCTTTCTTGGGTATTCAAAACAATTTGCTGTGATCAGTTTAAAAGCATTAGACCTGCATTAAATCATCTTATTCGTAGTGATTTTACTATTCTTCATTTATTTAGTGTATAAACAAGCTTTCAATCATTTTAACTT 355 25699019 0.764855459 19 343 2872 0.970260223 1.939519253 0.128252788 0.397183099 0.602230483 355 11 5 522 3R:25698908-25699044 7 425 3152 FBgn0051092 94.66666667 3.816666667 5.916666667 4.48943662 111.3537118 71.83098592 2 2 2 0.15 dme-miR-14-3p 8mer-A1 AAGACTGA 3R 25741857 25741864 - 3R_25741857_25741864_- 0.643463865 0.640817879 0.642140872 0.001871005 LpR1 FBtr0301467|FBtr0335236|FBtr0113480|FBtr0301470|FBtr0335235|FBtr0335237|FBtr0301469|FBtr0301466|FBtr0335238|FBtr0301471 25741346|25741346|25741346|25741346|25741346|25741346|25741346|25741346|25741346|25741346 25741979|25741979|25741979|25741979|25741979|25741979|25741979|25741979|25741979|25741979 3R - 25741836 25741878 3'utr LpR1 FlyBase G54784.1 AACACACACGCCTGAAGACTGAGCAACTCTGTGTATTGTGTAA 11 25741866 0.959682383 4 9 53 0.866666667 1.113943352 0.066666667 0.272727273 0.466666667 11 2 0 13 3R:25741836-25741878 8 LpR1 FBtr0335237|FBtr0335235|FBtr0301466|FBtr0301469|FBtr0335238|FBtr0301471|FBtr0301467|FBtr0335236|FBtr0113480|FBtr0301470 25741346|25741346|25741346|25741346|25741346|25741346|25741346|25741346|25741346|25741346 25741979|25741979|25741979|25741979|25741979|25741979|25741979|25741979|25741979|25741979 AAGACTGA 8mer-A1 dme-miR-14-3p 3R - 25741843 25741873 3'utr LpR1 FlyBase G41358.1 ACACGCCTGAAGACTGAGCAACTCTGTGTAT 5 25741866 0.904113456 2 4 19 0.833333333 0.698970004 0 0.2 0.333333333 5 1 0 5 3R:25741843-25741873 8 8 3153 FBgn0066101 6 0.153333333 0.226666667 1.333333333 52.17391304 35.29411765 2 2 2 0.15 dme-miR-2b-2-5p 7mer-A1 TGAAGAA 3R 25887418 25887424 + 3R_25887418_25887424_+ 0.769632365 0.808049156 0.788840761 0.02716478 SppL FBtr0084911|FBtr0344118|FBtr0084909|FBtr0300820|FBtr0300819|FBtr0084910 25887365|25887365|25887365|25887365|25887365|25887365 25888071|25888071|25888230|25888071|25888230|25887564 3R + 25887396 25887461 3'utr SppL FlyBase G45918.1 AAAAAACCAACAGCATACAATGTGAAGAACACACACACATAAGATCTAATACTAACGTTTGTCTCT 12 25887416 0.949648491 6 10 47 0.846153846 1.041392685 0.230769231 0.083333333 0.153846154 12 2 0 11 3R:25887396-25887461 7 SppL FBtr0084909|FBtr0300820|FBtr0300819|FBtr0084910|FBtr0084911|FBtr0344118 25887365|25887365|25887365|25887365|25887365|25887365 25888230|25888071|25888230|25887564|25888071|25888071 TGAAGAA 7mer-A1 dme-miR-2b-2-5p 3R + 25887393 25887479 3'utr SppL FlyBase G34631.1 AACAAAAAACCAACAGCATACAATGTGAAGAACACACACACATAAGATCTAATACTAACGTTTGTCTCTTAAATAACGTATTGAGTA 9 25887416 0.994121909 4 9 45 1 1.230448921 0.352941176 0.555555556 0.764705882 9 0 0 17 3R:25887393-25887479 7 5 3154 FBgn0039381 696.8266667 34.86 53.62333333 0.007175386 0.143430866 0.093242991 2 2 2 0.15 dme-miR-184-3p 7mer-m8 TCCGTCC 3R 25887949 25887955 + 3R_25887949_25887955_+ 0.661582042 0.661589869 0.661585955 5.59E-06 SppL FBtr0084911|FBtr0344118|FBtr0084909|FBtr0300820|FBtr0300819 25887365|25887365|25887365|25887365|25887365 25888071|25888071|25888230|25888071|25888230 3R + 25887916 25888043 3'utr SppL FlyBase G45924.1 AATCGAGATCCGTTTCCGTTTCACACGCTCATTTCCGTCCTTCGATTTTTTCGTTTTGTCACCCAATGTTTCCCACACATCTTCACAACCATAATGATGTTTTGCCAAAATGCATGTGTTCGTTGCAA 618 25887948 0.984084791 15 613 5045 0.990691489 2.872156273 0.167553191 0.165048544 0.313829787 618 7 0 745 3R:25887916-25888043 7 SppL FBtr0084909|FBtr0300820|FBtr0300819|FBtr0084911|FBtr0344118 25887365|25887365|25887365|25887365|25887365 25888230|25888071|25888230|25888071|25888071 TCCGTCC 7mer-m8 dme-miR-184-3p 3R + 25887922 25887976 3'utr SppL FlyBase G34634.1 GATCCGTTTCCGTTTCACACGCTCATTTCCGTCCTTCGATTTTTTCGTTTTGTCA 396 25887948 0.725859129 8 386 3013 0.977309562 2.002166062 0.141004862 0.396464646 0.612641815 396 9 5 603 3R:25887922-25887976 7 501 3155 FBgn0039381 696.8266667 34.86 53.62333333 0.718973633 14.37177281 9.342947722 1 1 1 0.15 dme-miR-317-3p 6mer2-7 GTGTTC 3R 25892477 25892482 + 3R_25892477_25892482_+ 0.999825236 0.924747529 0.962286382 0.053087951 Lnk FBtr0339162|FBtr0339161 25892042|25892042 25893270|25893270 3R + 25892456 25892495 3'utr Lnk FlyBase G45936.1 AAGTGATTACCATGAATTTGAGTGTTCGCCTAAAGACAAA 5 25892473 0.972335777 4 5 35 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 3R:25892456-25892495 6 Lnk FBtr0339161|FBtr0339162 25892042|25892042 25893270|25893270 GTGTTC 6mer2-7 dme-miR-317-3p 3R + 25892458 25892490 3'utr Lnk FlyBase G34641.1 GTGATTACCATGAATTTGAGTGTTCGCCTAAAG 5 25892473 0.726289796 3 4 38 0.666666667 0.602059991 0.166666667 0.2 0.333333333 5 2 0 4 3R:25892458-25892490 6 5 3156 FBgn0028717 647.6666667 24.78 37.87333333 0.007720021 0.201775626 0.132019011 4 4 4 0.15 dme-miR-263a-5p 8mer-m1 GTGCCATT 3R 25892861 25892868 + 3R_25892861_25892868_+ 0.434033005 0.497484211 0.465758608 0.044866774 Lnk FBtr0339160|FBtr0339162|FBtr0084937|FBtr0339161|FBtr0084935|FBtr0084936 25892801|25892042|25892801|25892042|25892801|25892801 25893270|25893270|25893270|25893270|25893270|25893270 3R + 25892826 25892871 3'utr Lnk FlyBase G45937.1 GCATTTCGCGGCTTAACCAGCGGAACTTTACTTTTGTGCCATTTTA 9 25892860 0.982325781 4 8 90 0.888888889 0.903089987 0 0 0 9 1 0 8 3R:25892826-25892871 8 Lnk FBtr0084935|FBtr0084936|FBtr0084937|FBtr0339161|FBtr0339160|FBtr0339162 25892801|25892801|25892801|25892042|25892801|25892042 25893270|25893270|25893270|25893270|25893270|25893270 GTGCCATT 8mer-m1 dme-miR-263a-5p 3R + 25892825 25892886 3'utr Lnk FlyBase G34642.1 TGCATTTCGCGGCTTAACCAGCGGAACTTTACTTTTGTGCCATTTTAATCATTGTCCTAAAG 8 25892860 0.993731794 4 5 65 0.8 1.079181246 0.066666667 0.5 0.733333333 8 3 0 12 3R:25892825-25892886 8 7 3157 FBgn0028717 647.6666667 24.78 37.87333333 0.010808029 0.282485876 0.184826615 1 1 1 0.15 dme-miR-317-3p 8mer-A1 TGTGTTCA 3R 25893028 25893035 + 3R_25893028_25893035_+ 0.631109177 0.631108313 0.631108745 6.36E-07 Lnk FBtr0339160|FBtr0339162|FBtr0084937|FBtr0339161|FBtr0084935|FBtr0084936 25892801|25892042|25892801|25892042|25892801|25892801 25893270|25893270|25893270|25893270|25893270|25893270 3R + 25892917 25893043 3'utr Lnk FlyBase G45937.3 ATGTGCGTTCTTTGCTTTCTTGATTCACTTGTTTCTATTTTAGTTAGTACCTCTTTTGGAAGACATGAAGTAACTGAACATTATTATGTATACATTATATAGCTAAATGTGTGTGTTCATTTTAAGT 25 25893030 0.770772092 15 24 224 0.964285714 1.431363764 0.142857143 0.12 0.214285714 25 1 0 27 3R:25892917-25893043 8 Lnk FBtr0084935|FBtr0084936|FBtr0084937|FBtr0339161|FBtr0339160|FBtr0339162 25892801|25892801|25892801|25892042|25892801|25892042 25893270|25893270|25893270|25893270|25893270|25893270 TGTGTTCA 8mer-A1 dme-miR-317-3p 3R + 25893009 25893034 3'utr Lnk FlyBase G34644.1 CATTATATAGCTAAATGTGTGTGTTC 9 25893030 0.735286682 2 9 73 1 1.204119983 0.0625 0.444444444 0.6875 9 0 0 16 3R:25893009-25893034 7 9.5 3158 FBgn0028717 647.6666667 24.78 37.87333333 0.014668039 0.383373688 0.25083612 -2 -2 -2 0.15 dme-miR-968-5p 6mer3-8 ACTACT 3R 25894983 25894988 + 3R_25894983_25894988_+ 0.999999975 1 0.999999988 0 CG5913 FBtr0084938 25894933 25895026 3R + 25894950 25894991 3'utr CG5913 FlyBase G45945.1 AATGTAGACCATAAACGACTGATCCTCTTGTAAACTACTAAC 54 25894961 0.812882482 8 48 285 0.916666667 1.138302698 0.1 0.111111111 0.2 54 2 3 55 3R:25894950-25894991 6 CG5913 FBtr0084938 25894933 25895026 ACTACT 6mer3-8 dme-miR-968-5p 3R + 25894942 25894992 3'utr CG5913 FlyBase G34651.1 TTCCCAAAAATGTAGACCATAAACGACTGATCCTCTTGTAAACTACTAACA 48 25894961 0.78499005 8 46 285 0.955223881 1.806179974 0.119402985 0.291666667 0.492537313 48 3 0 64 3R:25894942-25894992 6 11.5 3159 FBgn0039385 97.66666667 7.92 12.23 0.11774744 1.452020202 0.940310711 22 22 22 0.15 dme-miR-7-5p 8mer-A1 GTCTTCCA 3R 26022783 26022790 + 3R_26022783_26022790_+ 0.675366687 0.675357623 0.675362155 6.43E-06 E(spl)m3-HLH FBtr0084958 26022693 26023127 3R + 26022749 26022794 3'utr E(spl)m3-HLH FlyBase G45962.1 AATGGCTATTGACCGTTCTGCAACAAGATCCGTTGTCTTCCAAAGT 8 26022782 0.976566965 5 8 54 1 0.954242509 0.333333333 0.125 0.222222222 8 0 0 9 3R:26022749-26022794 8 E(spl)m3-HLH FBtr0084958 26022693 26023127 GTCTTCCA 8mer-A1 dme-miR-7-5p 3R + 26022762 26022796 3'utr E(spl)m3-HLH FlyBase G34665.1 CGTTCTGCAACAAGATCCGTTGTCTTCCAAAGTAA 5 26022783 0.614741982 3 5 34 1 0.84509804 0.571428571 0.2 0.428571429 5 0 0 7 3R:26022762-26022796 8 6 3160 FBgn0002609 41.66666667 4.113333333 6.463333333 0.144 1.458670989 0.928313564 1 0 0.5 0.15 dme-miR-304-5p 8mer-A1 TGAGATTA 3R 26049117 26049124 + 3R_26049117_26049124_+ 0.422481733 0.600968174 0.511724954 0.126209015 gro FBtr0337057|FBtr0305047|FBtr0339900 26048604|26048604|26048604 26049911|26049911|26049911 3R + 26049025 26049128 3'utr gro FlyBase G45974.1 AAAAGTCGGCGATACCTACCTACGTTCATCTTAACATAAAAACAAATAGGAGGATAAGTGGAATTAGTCAGTCATTGCAATTGCAGGAGCGTTGAGATTATGAT 17 26049116 0.827575544 10 15 110 0.894736842 1.230448921 0.157894737 0.117647059 0.210526316 17 2 0 17 3R:26049025-26049128 8 gro FBtr0337057|FBtr0339900|FBtr0305047 26048604|26048604|26048604 26049911|26049911|26049911 TGAGATTA 8mer-A1 dme-miR-304-5p 3R + 26049031 26049134 3'utr gro FlyBase G34679.1 CGGCGATACCTACCTACGTTCATCTTAACATAAAAACAAATAGGAGGATAAGTGGAATTAGTCAGTCATTGCAATTGCAGGAGCGTTGAGATTATGATTACCAG 12 26049105 0.962429916 9 12 63 1 1.255272505 0.333333333 0.25 0.5 12 0 0 18 3R:26049031-26049134 8 5 3161 FBgn0001139 2815.8 93.08 143.0433333 0.001775694 0.053717232 0.034954443 1 12 6.5 0.15 dme-miR-980-3p 7mer-A1 GCAGCTA 3R 26049609 26049615 + 3R_26049609_26049615_+ 0.823244225 0.823114981 0.823179603 9.14E-05 gro FBtr0337057|FBtr0305047|FBtr0339900 26048604|26048604|26048604 26049911|26049911|26049911 3R + 26049587 26049625 3'utr gro FlyBase G45976.1 AGTGTAAAATCCTATATTTTGAGCAGCTAAACCCAACAC 15 26049606 0.718880605 4 15 87 1 1.204119983 0 0.066666667 0.125 15 0 0 16 3R:26049587-26049625 7 gro FBtr0337057|FBtr0339900|FBtr0305047 26048604|26048604|26048604 26049911|26049911|26049911 GCAGCTA 7mer-A1 dme-miR-980-3p 3R + 26049593 26049626 3'utr gro FlyBase G34681.1 AAATCCTATATTTTGAGCAGCTAAACCCAACACA 6 26049606 0.944704627 2 6 32 1 0.954242509 0 0.5 0.666666667 6 0 0 9 3R:26049593-26049626 7 10.5 3162 FBgn0001139 2815.8 93.08 143.0433333 0.003728958 0.112806188 0.07340433 3 3 3 0.15 dme-miR-965-3p 7mer-m8 TACGCTT 3R 26054491 26054497 - 3R_26054491_26054497_- 0.620197259 0.620194403 0.620195831 2.05E-06 Dak1 FBtr0084976 26054235 26054574 3R - 26054476 26054616 stop_codon Dak1 FlyBase G54802.1 TTCGGGGAGGTGGAAAAGATATTTGTGGCCAGCGGCTTCTAGATTTCCTGTTCATATTCCGGTTATGTGTGTAGTGCTATCCTTACCTTTCATTTGTACCCTCTAAAAAAATACATATATACGCTTGTTAATAGTAATGCA 57 26054489 0.891698128 20 54 469 0.957142857 1.525044807 0.1 0.210526316 0.357142857 57 2 1 67 3R:26054476-26054616 7 Dak1 FBtr0084976 26054235 26054574 TACGCTT 7mer-m8 dme-miR-965-3p 3R - 26054477 26054552 3'utr Dak1 FlyBase G41368.1 ATGTGTGTAGTGCTATCCTTACCTTTCATTTGTACCCTCTAAAAAAATACATATATACGCTTGTTAATAGTAATGC 38 26054488 0.674912521 14 34 332 0.933333333 1.447158031 0.15 0.394736842 0.616666667 38 3 1 56 3R:26054477-26054552 7 22 3163 FBgn0028833 760.9966667 77.71 118.7166667 0.028909456 0.283103848 0.185315176 -8 -9 -8.5 0.15 dme-miR-995-5p 6mer3-8 AATTCG 3R 26130120 26130125 + 3R_26130120_26130125_+ 0.662605742 0.78751496 0.725060351 0.088324213 CG31324 FBtr0333926|FBtr0084985|FBtr0333925 26129613|26129613|26129613 26130190|26130190|26130674 3R + 26130095 26130137 3'utr CG31324 FlyBase G45992.1 AATTTCAATGGGCTTCGTTTTGAAAAATTCGTACTGATTAAAT 12 26130122 0.820914757 5 12 121 1 1.079181246 0 0 0 12 0 0 12 3R:26130095-26130137 6 CG31324 FBtr0333925|FBtr0084985|FBtr0333926 26129613|26129613|26129613 26130674|26130190|26130190 AATTCG 6mer3-8 dme-miR-995-5p 3R + 26130094 26130137 3'utr CG31324 FlyBase G34697.1 AAATTTCAATGGGCTTCGTTTTGAAAAATTCGTACTGATTAAAT 18 26130123 0.789672609 5 16 180 0.923076923 1.079181246 0 0.277777778 0.5 18 1 1 24 3R:26130094-26130137 6 13.5 3164 FBgn0051324 1208.083333 49.80333333 76.73666667 0.011174726 0.271066194 0.175926328 -2 -3 -2.5 0.15 dme-miR-965-3p 7mer-m8 TACGCTT 3R 26130354 26130360 + 3R_26130354_26130360_+ 0.620170922 0.620124862 0.620147892 3.25E-05 CG31324 FBtr0333925 26129613 26130674 3R + 26130332 26130374 3'utr CG31324 FlyBase G45994.1 AGCATAATCAATGGAACCCTACTACGCTTTTCGCTTTATACAA 89 26130361 0.607114703 5 86 598 0.973684211 1.744292983 0.219298246 0.247191011 0.412280702 89 2 1 111 3R:26130332-26130374 7 CG31324 FBtr0333925 26129613 26130674 TACGCTT 7mer-m8 dme-miR-965-3p 3R + 26130332 26130374 3'utr CG31324 FlyBase G34699.1 AGCATAATCAATGGAACCCTACTACGCTTTTCGCTTTATACAA 72 26130361 0.615389224 4 70 490 0.963302752 2.021189299 0.174311927 0.402777778 0.605504587 72 4 0 105 3R:26130332-26130374 7 79.5 3165 FBgn0051324 1208.083333 49.80333333 76.73666667 0.065806719 1.596278696 1.036010599 -7 -7 -7 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3R 26184875 26184881 + 3R_26184875_26184881_+ 0.443129725 0.443131012 0.443130369 9.19E-07 CG31323 FBtr0084988|FBtr0307339 26184611|26184611 26187307|26184974 3R + 26184854 26184905 3'utr CG31323 FlyBase G45999.1 ATGGAATTCATCAAGCAATTATGTGATTTTTAAGCGAATACTTAACAACTAT 39 26184872 0.990043342 7 39 384 1 1.785329835 0 0.41025641 0.62295082 39 0 0 61 3R:26184854-26184905 7 CG31323 FBtr0307339|FBtr0084988 26184611|26184611 26184974|26187307 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 26184815 26184899 3'utr CG31323 FlyBase G34701.1 ACGCTCGGAAACACACTCTCTCTTACACACAATAACATTATGGAATTCATCAAGCAATTATGTGATTTTTAAGCGAATACTTAAC 31 26184872 0.990095896 11 28 285 0.909090909 1.602059991 0 0.290322581 0.5 31 4 0 40 3R:26184815-26184899 7 31 3166 FBgn0051323 9.51 0.34 0.533333333 3.259726604 91.17647059 58.125 3 3 3 0.15 dme-miR-980-5p 7mer-A1 AAAAACA 3R 26233274 26233280 + 3R_26233274_26233280_+ 0.729285063 0.782911679 0.756098371 0.037919733 CG12290 FBtr0084990|FBtr0339612 26233100|26233100 26233329|26234700 3R + 26233141 26233289 3'utr CG12290 FlyBase G46009.1 AAACACTAAACTTGCTTGCTGAAGAATTCTAAGAACAGTATTCGTAATTTGTAAGTCTAGCAATTAACAAAGACAACTGTTTGAATTTGAGTTTTAAGACCAGATCATGCTGTCCTAGAAGCTTCTCATGCCAAAAAACAAAACCACAA 46 26233248 0.974074026 13 44 277 0.962264151 1.40654018 0.075471698 0.152173913 0.264150943 46 1 1 51 3R:26233141-26233289 7 CG12290 FBtr0339612 26233100 26234700 AAAAACA 7mer-A1 dme-miR-980-5p 3R + 26233227 26233282 3'utr CG12290 FlyBase G34708.3 TTGAGTTTTAAGACCAGATCATGCTGTCCTAGAAGCTTCTCATGCCAAAAAACAAA 19 26233256 0.974960203 5 18 88 0.967741935 1.477121255 0.258064516 0.368421053 0.612903226 19 1 0 30 3R:26233227-26233282 7 5 3167 FBgn0039419 2058.006667 56.21 86.04666667 0.002429535 0.088952144 0.058108003 26 18 22 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 26233500 26233505 + 3R_26233500_26233505_+ 0.923170335 0.895999971 0.909585153 0.019212303 CG12290 FBtr0339612 26233100 26234700 3R + 26233470 26233518 3'utr CG12290 FlyBase G46012.1 AAGCCAAGCCAAGTTGAGATCGTAATCAATGTACCTAAGCAACTTGCAT 43 26233499 0.919940568 3 43 239 1 1.681241237 0.020833333 0.11627907 0.208333333 43 0 0 48 3R:26233470-26233518 6 CG12290 FBtr0339612 26233100 26234700 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 26233440 26233528 3'utr CG12290 FlyBase G34710.1 AGGGTGGATATCAAACTGAAAAGTGGAACCAAGCCAAGCCAAGTTGAGATCGTAATCAATGTACCTAAGCAACTTGCATATGAACATTT 37 26233499 0.971999433 5 35 210 0.983606557 1.477121255 0.032786885 0.378378378 0.62295082 37 0 1 60 3R:26233440-26233528 6 37 3168 FBgn0039419 2058.006667 56.21 86.04666667 0.017978562 0.658245864 0.429999225 1 1 1 0.15 dme-miR-980-3p 7mer-A1 GCAGCTA 3R 26233996 26234002 + 3R_26233996_26234002_+ 0.790024308 0.823349555 0.806686931 0.023564546 CG12290 FBtr0339612 26233100 26234700 3R + 26233913 26234018 3'utr CG12290 FlyBase G46014.1 CAGCAGTTAGTTAGCCTTTGGTTAGCCAACGGCTATTGGGCCATTAAGTCAATTTGCTTTTTAGAACACCGCGGGCATTGCGTGCAGCTAAATACCTCATTAGTTA 22 26233991 0.966719795 13 21 117 0.961538462 1.397940009 0.153846154 0.136363636 0.269230769 22 1 0 25 3R:26233913-26234018 7 CG12290 FBtr0339612 26233100 26234700 GCAGCTA 7mer-A1 dme-miR-980-3p 3R + 26233958 26234002 3'utr CG12290 FlyBase G34712.1 AAGTCAATTTGCTTTTTAGAACACCGCGGGCATTGCGTGCAGCTA 6 26233998 0.969751968 5 5 31 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3R:26233958-26234002 7 8 3169 FBgn0039419 2058.006667 56.21 86.04666667 0.003887257 0.14232343 0.092972805 5 -2 1.5 0.15 dme-miR-11-3p 7mer-m1 TGTGATG 3R 26234358 26234364 + 3R_26234358_26234364_+ 0.612070291 0.61206879 0.61206954 1.06E-06 CG12290 FBtr0339612 26233100 26234700 3R + 26234341 26234514 3'utr CG12290 FlyBase G46018.1 ATTTCAAAACCAATTATTGTGATGTTGAGCAAGGGGGCAACCAAGAATGTAATTTCGAAATGCATTAAAAATAACTTAAAACATGTATTAATAGTTATAATATATACAAGCTTATGTGTGTATACATACTTTACTAAATAGTGATATTTTTTCAAATTTATTCAACTGTCATTC 71 26234357 0.984499027 18 68 545 0.938271605 1.579783597 0.172839506 0.126760563 0.234567901 71 4 1 76 3R:26234341-26234514 7 CG12290 FBtr0339612 26233100 26234700 TGTGATG 7mer-m1 dme-miR-11-3p 3R + 26234311 26234382 3'utr CG12290 FlyBase G34715.1 ATTCATGCATGTGTGTCGGACAAAGGAAATATTTCAAAACCAATTATTGTGATGTTGAGCAAGGGGGCAACC 25 26234357 0.980170331 8 24 171 0.923076923 1.556302501 0.512820513 0.36 0.58974359 25 3 0 36 3R:26234311-26234382 7 38 3170 FBgn0039419 2058.006667 56.21 86.04666667 0.018464469 0.676036292 0.441620826 1 1 1 0.15 dme-miR-79-3p 7mer-m8 TAGCTTT 3R 26234580 26234586 + 3R_26234580_26234586_+ 0.378677097 0.613520799 0.496098948 0.166059573 CG12290 FBtr0339612 26233100 26234700 3R + 26234550 26234590 3'utr CG12290 FlyBase G46019.1 TAAAACCAAACCAAGTTCAATGTGACAAATTAGCTTTTAAT 12 26234570 0.971173251 3 12 72 1 1.230448921 0.235294118 0.333333333 0.529411765 12 0 0 17 3R:26234550-26234590 7 CG12290 FBtr0339612 26233100 26234700 TAGCTTT 7mer-m8 dme-miR-79-3p 3R + 26234560 26234596 3'utr CG12290 FlyBase G34716.1 CCAAGTTCAATGTGACAAATTAGCTTTTAATCCGAAA 9 26234579 0.760241708 3 8 73 0.909090909 0.698970004 0.181818182 0.222222222 0.363636364 9 0 1 10 3R:26234560-26234596 7 9 3171 FBgn0039419 2058.006667 56.21 86.04666667 0.004373164 0.160113859 0.104594406 10 1 5.5 0.15 dme-miR-184-5p 7mer-m8 TGATAAG 3R 26254725 26254731 - 3R_26254725_26254731_- 0.658999343 0.658999341 0.658999342 0 Ald FBtr0084994|FBtr0339614 26254067|26254601 26255341|26255341 3R - 26254692 26254792 3'utr Ald FlyBase G54819.1 GATCCACTATGAAAATCGATGTTTTACCATTATTATTATTATTAAACTTTATATTTATGATTGATAAGTATAAGTGAAACAAATGACGAGAATAAACAAAC 12 26254709 0.992094115 9 10 114 0.769230769 1 0.230769231 0.083333333 0.153846154 12 3 0 10 3R:26254692-26254792 7 Ald FBtr0339614|FBtr0084994 26254601|26254067 26255341|26255341 TGATAAG 7mer-m8 dme-miR-184-5p 3R - 26254692 26254796 3'utr Ald FlyBase G41383.1 AAAAGATCCACTATGAAAATCGATGTTTTACCATTATTATTATTATTAAACTTTATATTTATGATTGATAAGTATAAGTGAAACAAATGACGAGAATAAACAAAC 13 26254761 0.989412884 9 12 114 1 1.301029996 0.05 0.384615385 0.6 13 0 0 20 3R:26254692-26254796 7 3 3172 FBgn0000064 2998.926667 179.2266667 272.1633333 0.001000358 0.016738581 0.011022793 -22 30 4 0.15 dme-miR-282-5p 6mer2-7 GAGGCT 3R 26254847 26254852 - 3R_26254847_26254852_- 0.999989926 0.999998525 0.999994225 6.08E-06 Ald FBtr0084994|FBtr0339614 26254067|26254601 26255341|26255341 3R - 26254808 26254881 3'utr Ald FlyBase G54820.1 CAATCACTATCAGCAACACCTAAATGTATGAGGCTTGTAACATTGAAGTCGCACAACGTTTTTTGAATTTTTTT 186 26254853 0.914834612 10 185 1192 0.995495495 2.344392274 0.018018018 0.150537634 0.288288288 186 1 0 221 3R:26254808-26254881 6 Ald FBtr0339614|FBtr0084994 26254601|26254067 26255341|26255341 GAGGCT 6mer2-7 dme-miR-282-5p 3R - 26254826 26254876 3'utr Ald FlyBase G41384.1 ACTATCAGCAACACCTAAATGTATGAGGCTTGTAACATTGAAGTCGCACAA 67 26254853 0.946240926 8 67 408 1 2.012837225 0 0.417910448 0.621359223 67 0 0 103 3R:26254826-26254876 6 125 3173 FBgn0000064 2998.926667 179.2266667 272.1633333 0.041681579 0.697440857 0.459283029 1 1 1 0.15 dme-miR-2b-2-5p 6mer3-8 TTGAAG 3R 26254989 26254994 - 3R_26254989_26254994_- 0.680688773 0.999648141 0.840168457 0.225538284 Ald FBtr0084994|FBtr0339614 26254067|26254601 26255341|26255341 3R - 26254943 26255050 3'utr Ald FlyBase G54821.1 AATTCAACAATTCAAACAATTTTATCTTTAGTTTTAAGCACATGAACCTATTATTGTTGAAGTTATTACATTTCTATTCTATTATTATGATTATGCAAGATTTCAATG 42 26255008 0.991144169 14 41 437 0.979591837 1.681241237 0.06122449 0.166666667 0.285714286 42 1 0 48 3R:26254943-26255050 6 Ald FBtr0339614|FBtr0084994 26254601|26254067 26255341|26255341 TTGAAG 6mer3-8 dme-miR-2b-2-5p 3R - 26254987 26255031 3'utr Ald FlyBase G41385.1 TTTTATCTTTAGTTTTAAGCACATGAACCTATTATTGTTGAAGTT 16 26255008 0.888927535 5 15 167 0.961538462 1.096910013 0 0.4375 0.653846154 16 0 1 25 3R:26254987-26255031 6 7.5 3174 FBgn0000064 2998.926667 179.2266667 272.1633333 0.002500895 0.041846451 0.027556982 14 14 14 0.15 dme-miR-2a-2-5p 7mer-m8 TGATGAG 3R 26255088 26255094 - 3R_26255088_26255094_- 0.658772685 0.658897137 0.658834911 8.80E-05 Ald FBtr0084994|FBtr0339614 26254067|26254601 26255341|26255341 3R - 26255067 26255122 3'utr Ald FlyBase G54822.1 TATAACATTATTTTAGAGAACAACTAAATGATGAGTGCAGAAGAAAGGATTGAATA 25 26255092 0.73773295 5 24 106 1 1.477121255 0 0.16 0.3 25 0 0 30 3R:26255067-26255122 7 Ald FBtr0339614|FBtr0084994 26254601|26254067 26255341|26255341 TGATGAG 7mer-m8 dme-miR-2a-2-5p 3R - 26255053 26255110 3'utr Ald FlyBase G41386.1 TTAGAGAACAACTAAATGATGAGTGCAGAAGAAAGGATTGAATATGTTCGATGGAGAA 15 26255092 0.924426397 7 15 54 1 1.278753601 0.368421053 0.2 0.368421053 15 0 0 19 3R:26255053-26255110 7 17.5 3175 FBgn0000064 2998.926667 179.2266667 272.1633333 0.005835421 0.09764172 0.064299624 -2 -2 -2 0.15 dme-miR-184-3p 6mer3-8 TCCGTC 3R 26256258 26256263 - 3R_26256258_26256263_- 0.98247239 0.987324958 0.984898674 0.003431306 Ald FBtr0114544|FBtr0085000 26255964|26255964 26256527|26256527 3R - 26256240 26256288 3'utr Ald FlyBase G54829.1 AGGGTATTTACGTGCCCGGCTCAATTCCGTCGTTTGCCGGCAATGCCAA 84 26256264 0.789324862 3 84 576 1 1.968482949 0.268817204 0.107142857 0.193548387 84 0 0 93 3R:26256240-26256288 6 Ald FBtr0085000|FBtr0114544 26255964|26255964 26256527|26256527 TCCGTC 6mer3-8 dme-miR-184-3p 3R - 26256235 26256288 3'utr Ald FlyBase G41391.1 AGGGTATTTACGTGCCCGGCTCAATTCCGTCGTTTGCCGGCAATGCCAACCTCT 33 26256264 0.796186436 3 33 241 1 1.643452676 0.136363636 0.242424242 0.431818182 33 0 0 44 3R:26256235-26256288 6 58.5 3176 FBgn0000064 2998.926667 179.2266667 272.1633333 0.019506979 0.326402321 0.214944457 1 1 1 0.15 dme-miR-1003-3p 8mer-A1 ATGTGAGA 3R 26453743 26453750 + 3R_26453743_26453750_+ 0.619416053 0.604840104 0.612128079 0.010306788 CG5447 FBtr0085012 26453708 26454585 3R + 26453708 26453821 stop_codon CG5447 FlyBase G46024.1 GACTTCCGCTTTCCCATTCAGCCAACGAGTTTTTCATGTGAGATCGAGCAGCTACAGTCGCATCAACAGGCATGTGAAGGAGAAGAGTCCGTTTCAGCAATTATCAAGCAAAAG 34 26453745 0.970220556 11 32 180 0.945945946 1.544068044 0.216216216 0.088235294 0.162162162 34 2 0 35 3R:26453708-26453821 8 CG5447 FBtr0085012 26453708 26454585 ATGTGAGA 8mer-A1 dme-miR-1003-3p 3R + 26453731 26453772 stop_codon CG5447 FlyBase G34720.1 AACGAGTTTTTCATGTGAGATCGAGCAGCTACAGTCGCATCA 13 26453745 0.711705003 4 12 74 0.952380952 1.301029996 0.19047619 0.461538462 0.666666667 13 1 0 20 3R:26453731-26453772 8 15 3177 FBgn0039427 734.0633333 64.46 98.42666667 0.020434204 0.232702451 0.152397724 -2 -2 -2 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 3R 26454175 26454181 + 3R_26454175_26454181_+ 0.555735447 0.442428844 0.499082146 0.080119865 CG5447 FBtr0330152|FBtr0085012 26453747|26453708 26454585|26454585 3R + 26454087 26454192 3'utr CG5447 FlyBase G46027.1 TTAATGATTAGCCAAGGCAGTGTACGGCCAGTTAGTTAGTATTTATGCAATAGCAGGCATAGTCATGTAAGTGAAAAGCTACCGAAACTGCATTTTGAGCCGAAGC 16 26454182 0.916428583 9 14 81 0.80952381 1.230448921 0.476190476 0.125 0.333333333 16 4 0 17 3R:26454087-26454192 7 CG5447 FBtr0330152|FBtr0085012 26453747|26453708 26454585|26454585 TGCATTT 7mer-m8 dme-miR-277-3p 3R + 26454160 26454191 3'utr CG5447 FlyBase G34724.1 AAAAGCTACCGAAACTGCATTTTGAGCCGAAG 5 26454181 0.85395908 3 4 25 0.777777778 0.84509804 0.111111111 0.6 0.777777778 5 2 0 7 3R:26454160-26454191 7 6.5 3178 FBgn0039427 734.0633333 64.46 98.42666667 0.008854822 0.100837729 0.066039014 -7 -6 -6.5 0.15 dme-miR-11-3p 7mer-m1 TGTGATG 3R 26469771 26469777 + 3R_26469771_26469777_+ 0.607070198 0.606330158 0.606700178 0.000523259 CG5455 FBtr0085015|FBtr0085016 26469401|26469401 26470008|26470008 3R + 26469603 26469788 3'utr CG5455 FlyBase G46036.1 CATATAATTATATACGCCTATCCATAGCTCAAGTTAGTTATACACATATTATGTTGCCTTTAGTTTAAGCTTAAAACGAGCAGATATATATGCTCAGACATCCCATCTGGTGTCAATGATATTTTGGAATTTTTGTGATCGATTGTGATCATTTTTCAAGCACTTTATTGTGATGATCCCCTAAAT 72 26469769 0.988761666 21 68 622 0.956521739 1.643452676 0.054347826 0.236111111 0.402173913 72 3 1 88 3R:26469603-26469788 7 CG5455 FBtr0085015|FBtr0085016 26469401|26469401 26470008|26470008 TGTGATG 7mer-m1 dme-miR-11-3p 3R + 26469695 26469786 3'utr CG5455 FlyBase G34735.1 CTCAGACATCCCATCTGGTGTCAATGATATTTTGGAATTTTTGTGATCGATTGTGATCATTTTTCAAGCACTTTATTGTGATGATCCCCTAA 47 26469770 0.987461187 15 45 402 0.970588235 1.342422681 0.220588235 0.361702128 0.558823529 47 0 2 66 3R:26469695-26469786 7 36 3179 FBgn0039430 151.6666667 6.406666667 9.843333333 0.237362637 5.619146722 3.657297663 2 1 1.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 26470793 26470799 - 3R_26470793_26470799_- 0.705574061 0.730182554 0.717878307 0.017400837 plum FBtr0305049|FBtr0305049|FBtr0305049 26470076|26470076|26470076 26472978|26472978|26472978 3R - 26470771 26470865 3'utr plum FlyBase G54842.1 AACGATGCGGAGAACTGGAGAAAAAATAAGTAAAATAGCTGCGATTGTGATCGCCGTGTAAGTGGATGTGATAAATGTTTAAATTATTTAAGCGC 155 26470803 0.885627819 17 147 1129 0.952941176 1.73239376 0.4 0.096774194 0.176470588 155 6 2 162 3R:26470771-26470865 7 plum FBtr0305049|FBtr0305049|FBtr0305049 26470076|26470076|26470076 26472978|26472978|26472978 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 26470768 26470838 3'utr plum FlyBase G41398.1 AAGTAAAATAGCTGCGATTGTGATCGCCGTGTAAGTGGATGTGATAAATGTTTAAATTATTTAAGCGCAAA 95 26470803 0.836633146 9 89 693 0.903448276 1.272173256 0.310344828 0.4 0.606896552 95 8 6 131 3R:26470768-26470838 7 81.5 3180 FBgn0039431 3110.826667 52.34666667 80.39 0.026198824 1.556928171 1.013807688 4 4 4 0.15 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 3R 26472059 26472066 - 3R_26472059_26472066_- 0.6745601 0.674714374 0.674637237 0.000109107 plum FBtr0302210|FBtr0305049|FBtr0302209|FBtr0344120 26471101|26470076|26471101|26471101 26472978|26472978|26472978|26472978 3R - 26472042 26472123 3'utr plum FlyBase G54845.1 AATTTCCGCATATTTACTGCTGCATTTTGTTTTGTTTACACAACCGATATATCAAATGTACCTGATTATATTCATTTTGCAT 674 26472067 0.985346554 9 664 5491 0.989384289 2.492294658 0.527600849 0.24925816 0.462845011 674 8 2 932 3R:26472042-26472123 8 plum FBtr0302210|FBtr0305049|FBtr0302209|FBtr0344120 26471101|26470076|26471101|26471101 26472978|26472978|26472978|26472978 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R - 26472044 26472092 3'utr plum FlyBase G41400.1 TTGTTTACACAACCGATATATCAAATGTACCTGATTATATTCATTTTGC 448 26472067 0.847330742 8 439 3595 0.98694517 2.878521796 0.54308094 0.407158837 0.654046997 447 10 0 756 3R:26472044-26472092 8 557.5 3181 FBgn0039431 3110.826667 52.34666667 80.39 0.179212814 10.65015283 6.934942157 1 1 1 0.15 dme-miR-282-5p 6mer2-7 GAGGCT 3R 26472560 26472565 - 3R_26472560_26472565_- 0.989148621 0.988186374 0.988667497 0.000680378 plum FBtr0302210|FBtr0305049|FBtr0302209|FBtr0344120 26471101|26470076|26471101|26471101 26472978|26472978|26472978|26472978 3R - 26472541 26472583 3'utr plum FlyBase G54846.1 TTGTTTTTTTCGTTAATTGAGGCTCATTTTTACATGTAACTTT 85 26472567 0.837523237 7 85 883 1 2.041392685 0.127272727 0.223529412 0.4 85 0 0 110 3R:26472541-26472583 6 plum FBtr0302210|FBtr0305049|FBtr0302209|FBtr0344120 26471101|26470076|26471101|26471101 26472978|26472978|26472978|26472978 GAGGCT 6mer2-7 dme-miR-282-5p 3R - 26472540 26472586 3'utr plum FlyBase G41401.1 TGTTTGTTTTTTTCGTTAATTGAGGCTCATTTTTACATGTAACTTTT 70 26472567 0.83958246 6 68 721 0.969072165 1.973127854 0.164948454 0.271428571 0.474226804 70 3 0 94 3R:26472540-26472586 6 77.5 3182 FBgn0039431 3110.826667 52.34666667 80.39 0.024912992 1.480514519 0.964050255 2 2 2 0.15 dme-miR-986-5p 7mer-A1 TTCGAGA 3R 26594944 26594950 + 3R_26594944_26594950_+ 0.823321566 0.823275649 0.823298607 3.25E-05 scrib FBtr0308622|FBtr0308620|FBtr0335522|FBtr0308621|FBtr0308625 26594814|26594814|26594814|26594814|26594814 26595018|26596188|26596188|26596188|26596188 3R + 26594919 26594954 3'utr scrib FlyBase G46052.1 AGTGTTTATTTCGAACGAGACTTTTTTCGAGACTAA 7 26594942 0.730538459 2 6 49 0.875 0.84509804 0.25 0.142857143 0.25 7 1 0 7 3R:26594919-26594954 7 scrib FBtr0308625|FBtr0308621|FBtr0335522|FBtr0308620|FBtr0308622 26594814|26594814|26594814|26594814|26594814 26596188|26596188|26596188|26596188|26595018 TTCGAGA 7mer-A1 dme-miR-986-5p 3R + 26594926 26594959 3'utr scrib FlyBase G34742.1 ATTTCGAACGAGACTTTTTTCGAGACTAAGCTAC 8 26594942 0.975840858 3 7 52 1 0.954242509 0.222222222 0.125 0.222222222 8 0 0 9 3R:26594926-26594959 7 6.5 3183 FBgn0263289 2418.266667 41.02 62.81333333 0.002687876 0.158459288 0.103481214 2 2 2 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 26595943 26595948 + 3R_26595943_26595948_+ 0.988501724 0.986288888 0.987395306 0.001564686 scrib FBtr0308620|FBtr0308620|FBtr0308620|FBtr0335522|FBtr0335522|FBtr0335522|FBtr0308621|FBtr0308621|FBtr0308621|FBtr0308625|FBtr0308625|FBtr0308625 26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814 26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188 3R + 26595928 26595993 3'utr scrib FlyBase G46054.1 TTTATATGTTAATATCTGTGAACAAAGCAACCACATAAATAAGAACTGCTTAACGATGTATTAAAA 85 26595942 0.794530027 8 83 489 0.981132075 2.017033339 0.132075472 0.188235294 0.349056604 85 2 0 104 3R:26595928-26595993 6 scrib FBtr0308625|FBtr0308625|FBtr0308625|FBtr0308621|FBtr0308621|FBtr0308621|FBtr0335522|FBtr0335522|FBtr0335522|FBtr0308620|FBtr0308620|FBtr0308620 26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814 26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 26595931 26596014 3'utr scrib FlyBase G34743.1 ATATGTTAATATCTGTGAACAAAGCAACCACATAAATAAGAACTGCTTAACGATGTATTAAAATAACTACTGACTACGGTTATG 36 26595942 0.769942051 8 32 207 0.928571429 1.716003344 0.196428571 0.416666667 0.625 36 4 0 52 3R:26595931-26596014 6 49 3184 FBgn0263289 2418.266667 41.02 62.81333333 0.020262447 1.194539249 0.780089153 1 1 1 0.15 dme-miR-263a-5p 8mer-A1 GTGCCATA 3R 26596098 26596105 + 3R_26596098_26596105_+ 0.621912112 0.625138221 0.623525167 0.002281197 scrib FBtr0308620|FBtr0335522|FBtr0308621|FBtr0308625 26594814|26594814|26594814|26594814 26596188|26596188|26596188|26596188 3R + 26596043 26596121 3'utr scrib FlyBase G46055.1 CCATTACCATTACTATTATTAATCATCCACATATGTACGTATTTGTCATCGATTTGTGCCATACATATTTTATGTAACT 19 26596096 0.806837107 7 16 178 0.913043478 1.322219295 0 0.210526316 0.347826087 19 2 0 21 3R:26596043-26596121 8 scrib FBtr0308625|FBtr0308621|FBtr0335522|FBtr0308620 26594814|26594814|26594814|26594814 26596188|26596188|26596188|26596188 GTGCCATA 8mer-A1 dme-miR-263a-5p 3R + 26596081 26596122 3'utr scrib FlyBase G34744.1 GTATTTGTCATCGATTTGTGCCATACATATTTTATGTAACTC 20 26596097 0.739332137 6 20 184 1 1.447158031 0 0.3 0.5 20 0 0 28 3R:26596081-26596122 8 17.5 3185 FBgn0263289 2418.266667 41.02 62.81333333 0.007236588 0.42662116 0.278603269 2 1 1.5 0.15 dme-miR-13b-2-5p 6mer2-7 TTGACG 3R 26715618 26715623 - 3R_26715618_26715623_- 0.596133838 0.675638305 0.635886071 0.056218171 CG6425 FBtr0085047 26715163 26716018 3R - 26715604 26715657 3'utr CG6425 FlyBase G54860.1 AGGTGGATACGACTGGTCGCCGACAGGCAGTGAATTGACGTCCCCCGGTTGAGC 12 26715623 0.928727298 3 12 43 1 1.079181246 0.083333333 0 0 12 0 0 12 3R:26715604-26715657 6 CG6425 FBtr0085047 26715163 26716018 TTGACG 6mer2-7 dme-miR-13b-2-5p 3R - 26715597 26715645 3'utr CG6425 FlyBase G41413.1 CTGGTCGCCGACAGGCAGTGAATTGACGTCCCCCGGTTGAGCTTTCATT 8 26715623 0.94651519 3 8 41 1 1.146128036 0.357142857 0.625 0.785714286 8 0 0 14 3R:26715597-26715645 6 9 3186 FBgn0039449 117.6666667 6.803333333 10.38 0.076487252 1.322880941 0.867052023 0 0 0 0.15 dme-miR-2a-2-5p 7mer-m8 TGATGAG 3R 26715952 26715958 - 3R_26715952_26715958_- 0.556385327 0.551028654 0.553706991 0.003787688 CG6425 FBtr0085047 26715163 26716018 3R - 26715933 26716009 3'utr CG6425 FlyBase G54861.1 AGGTAACCAGCCCCTGAATACAATCAGCTTCCCTTCAGCGAGTACCAATTGTGATGAGCAAAGTTAGAGTTTAAGAT 76 26715961 0.748998765 8 70 433 0.936170213 1.245512668 0.489361702 0.184210526 0.340425532 76 2 4 88 3R:26715933-26716009 7 CG6425 FBtr0085047 26715163 26716018 TGATGAG 7mer-m8 dme-miR-2a-2-5p 3R - 26715883 26716002 3'utr CG6425 FlyBase G41414.1 CAGCCCCTGAATACAATCAGCTTCCCTTCAGCGAGTACCAATTGTGATGAGCAAAGTTAGAGTTTAAGATATTTCGTTTTGTTTCGCTTGACTTGCGTGCCCCCTTGCCTGAGCATTCTG 77 26715961 0.764524821 13 72 454 0.933333333 1.204119983 0.425 0.402597403 0.616666667 77 2 6 112 3R:26715883-26716002 7 61.5 3187 FBgn0039449 117.6666667 6.803333333 10.38 0.52266289 9.039686428 5.924855491 3 3 3 0.15 dme-miR-980-3p 6mer3-8 GGCAGC 3R 26784976 26784981 + 3R_26784976_26784981_+ 0.999040241 0.999066538 0.999053389 1.86E-05 CG42790 FBtr0310469 26784837 26785753 3R + 26784960 26784994 3'utr CG42790 FlyBase G46066.1 ACACACCCATCTATTTGGCAGCCAGACTTTGATTC 15 26784974 0.723764838 3 14 78 0.941176471 1.204119983 0 0.133333333 0.235294118 15 1 0 16 3R:26784960-26784994 6 CG42790 FBtr0310469 26784837 26785753 GGCAGC 6mer3-8 dme-miR-980-3p 3R + 26784961 26784988 3'utr CG42790 FlyBase G34754.1 CACACCCATCTATTTGGCAGCCAGACTT 6 26784974 0.945017399 2 6 28 1 1 0 0.5 0.7 6 0 0 10 3R:26784961-26784988 6 10.5 3188 FBgn0261861 0.333333333 0.033333333 0.05 31.5 315 210 2 2 2 0.15 dme-miR-252-5p 7mer-m8 GTACTTA 3R 26842575 26842581 - 3R_26842575_26842581_- 0.58478551 0.585166504 0.584976007 0.000269408 Lerp FBtr0334310|FBtr0085099|FBtr0300939|FBtr0085097 26842460|26842460|26842460|26842460 26843181|26843181|26843181|26843181 3R - 26842554 26842706 3'utr Lerp FlyBase G54881.1 ATAACCAGTATAGCGCAGCAGCTTTTTCCTTCCATAAAAGATGTGATTTCATTTTTAAAACTTTCAAGTGCAGCTTGTTAGTGGTATTCCTTTGAAACGATTTGTATTTTACTCTAAGGCAATCTGTACTTACATTTATGTTTGTGTCTTGAG 126 26842582 0.978177495 19 122 1114 0.962962963 2.193124598 0.080246914 0.246031746 0.413580247 126 6 0 156 3R:26842554-26842706 7 Lerp FBtr0334310|FBtr0085099|FBtr0300939|FBtr0085097 26842460|26842460|26842460|26842460 26843181|26843181|26843181|26843181 GTACTTA 7mer-m8 dme-miR-252-5p 3R - 26842533 26842705 3'utr Lerp FlyBase G41428.1 TAACCAGTATAGCGCAGCAGCTTTTTCCTTCCATAAAAGATGTGATTTCATTTTTAAAACTTTCAAGTGCAGCTTGTTAGTGGTATTCCTTTGAAACGATTTGTATTTTACTCTAAGGCAATCTGTACTTACATTTATGTTTGTGTCTTGAGTTGTTTTTAGTTCAATAAGGC 80 26842582 0.987529309 15 78 706 0.982300885 2.045322979 0.03539823 0.3 0.504424779 80 2 0 111 3R:26842533-26842705 7 39 3189 FBgn0051072 373.47 12.92333333 19.75 0.104426058 3.017797266 1.974683544 1 1 1 0.15 dme-miR-1007-3p 6mer3-8 TGAGCT 3R 26842997 26843002 - 3R_26842997_26843002_- 0.874424395 0.924259705 0.89934205 0.035238879 Lerp FBtr0334310|FBtr0085099|FBtr0300939|FBtr0085097 26842460|26842460|26842460|26842460 26843181|26843181|26843181|26843181 3R - 26842961 26843033 3'utr Lerp FlyBase G54884.1 AGAAGACATTACTGAAAACTGGAACTGATTGTGAGCTAAACAAACCAATTGAAAACTAAAGAAAACCGTAGTA 39 26843005 0.962489045 8 37 187 0.94 1.371067862 0.12 0.256410256 0.42 39 2 1 47 3R:26842961-26843033 6 Lerp FBtr0334310|FBtr0085099|FBtr0300939|FBtr0085097 26842460|26842460|26842460|26842460 26843181|26843181|26843181|26843181 TGAGCT 6mer3-8 dme-miR-1007-3p 3R - 26842959 26843023 3'utr Lerp FlyBase G41431.1 ACTGAAAACTGGAACTGATTGTGAGCTAAACAAACCAATTGAAAACTAAAGAAAACCGTAGTAGA 33 26843005 0.958388219 8 30 156 0.9375 1.176091259 0.083333333 0.303030303 0.520833333 33 1 2 45 3R:26842959-26843023 6 27.5 3190 FBgn0051072 373.47 12.92333333 19.75 0.073633759 2.12793397 1.392405063 3 3 3 0.15 dme-miR-932-5p 6mer2-7 GAATTG 3R 26868988 26868993 + 3R_26868988_26868993_+ 0.737139878 0.755855776 0.746497827 0.01323414 His2Av FBtr0334311 26868585 26869220 3R + 26868983 26869044 3'utr His2Av FlyBase G46093.1 GTAAAGAATTGCAACTACATAGATGGTAATTAATTTCAGCTGTAAGAAGTACAAGTTTTTCA 15 26868991 0.919949959 5 14 102 0.875 1.146128036 0.0625 0.066666667 0.125 15 2 0 14 3R:26868983-26869044 6 His2Av FBtr0334311 26868585 26869220 GAATTG 6mer2-7 dme-miR-932-5p 3R + 26868968 26869069 3'utr His2Av FlyBase G34774.1 CTTGTGTCGATGAATGTAAAGAATTGCAACTACATAGATGGTAATTAATTTCAGCTGTAAGAAGTACAAGTTTTTCATAATTGTGAGAAAAGTGCAGTAGTA 13 26868991 0.976481393 10 13 79 1 1.342422681 0.181818182 0.384615385 0.636363636 13 0 0 22 3R:26868968-26869069 6 8 3191 FBgn0001197 5513.57 740.2033333 1128.183333 0.001450966 0.010807841 0.007091046 -3 -3 -3 0.15 dme-miR-14-3p 7mer-A1 AGACTGA 3R 26869202 26869208 + 3R_26869202_26869208_+ 0.823342387 0.823317553 0.82332997 1.75E-05 His2Av FBtr0334311 26868585 26869220 3R + 26869164 26869223 3'utr His2Av FlyBase G46096.1 CACAACTGTAGCTTTTCATCCGAAAGATAATAATGAATAGACTGACCTGACGTTTTTCAA 20 26869200 0.958613419 6 19 95 0.96875 1.491361694 0.46875 0.4 0.625 20 1 0 31 3R:26869164-26869223 7 His2Av FBtr0334311 26868585 26869220 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 26869170 26869216 3'utr His2Av FlyBase G34775.1 TGTAGCTTTTCATCCGAAAGATAATAATGAATAGACTGACCTGACGT 10 26869201 0.704427486 7 9 51 0.882352941 1.176091259 0.294117647 0.6 0.764705882 10 2 0 15 3R:26869170-26869216 7 12.5 3192 FBgn0001197 5513.57 740.2033333 1128.183333 0.002267134 0.016887252 0.011079759 2 1 1.5 0.15 dme-bantam-3p 7mer-A1 GATCTCA 3R 26872393 26872399 - 3R_26872393_26872399_- 0.821776523 0.823349554 0.822563038 0.00111235 Rb97D FBtr0085093 26872127 26873864 3R - 26872373 26872420 3'utr Rb97D FlyBase G54913.1 TCGTAAGGTAAGTTAGTAACGGATCTCATCTAGGATAAACTAGAGTTT 35 26872391 0.690347602 6 32 251 0.923076923 1.255272505 0.128205128 0.114285714 0.205128205 35 2 1 36 3R:26872373-26872420 7 Rb97D FBtr0085093 26872127 26873864 GATCTCA 7mer-A1 dme-bantam-3p 3R - 26872371 26872420 3'utr Rb97D FlyBase G41456.1 TCGTAAGGTAAGTTAGTAACGGATCTCATCTAGGATAAACTAGAGTTTTT 23 26872391 0.697244343 8 23 161 1 1.531478917 0.117647059 0.47826087 0.647058824 23 0 0 34 3R:26872371-26872420 7 28.5 3193 FBgn0004903 1478.54 66.86666667 102.46 0.019275772 0.426221336 0.27815733 -8 -8 -8 0.15 dme-miR-932-5p 7mer-A1 GAATTGA 3R 26872736 26872742 - 3R_26872736_26872742_- 0.813838519 0.806156906 0.809997712 0.005431711 Rb97D FBtr0100336|FBtr0100334|FBtr0085092|FBtr0085093|FBtr0100335|FBtr0100340|FBtr0100338|FBtr0100337 26872581|26872581|26872581|26872127|26872581|26872581|26872581|26872581 26873961|26873864|26873864|26873864|26873961|26873864|26873864|26873864 3R - 26872717 26872813 3'utr Rb97D FlyBase G54915.1 GGATTAACTAGACTTACGATTTATTCTCGACTCTCTCCTATTATTAAGCTGTTGTGCACGCCAAGGGCTTTGAATTGATCTTTATATATAATGCAGT 25 26872739 0.901085019 9 22 230 0.857142857 1.380211242 0.392857143 0.12 0.214285714 25 4 0 24 3R:26872717-26872813 7 Rb97D FBtr0100337|FBtr0100338|FBtr0100340|FBtr0100335|FBtr0085093|FBtr0085092|FBtr0100334|FBtr0100336 26872581|26872581|26872581|26872581|26872127|26872581|26872581|26872581 26873864|26873864|26873864|26873961|26873864|26873864|26873864|26873961 GAATTGA 7mer-A1 dme-miR-932-5p 3R - 26872712 26872768 3'utr Rb97D FlyBase G41457.1 AAGCTGTTGTGCACGCCAAGGGCTTTGAATTGATCTTTATATATAATGCAGTACTGA 27 26872739 0.767320575 8 23 247 0.789473684 1.176091259 0.263157895 0.259259259 0.473684211 27 7 1 30 3R:26872712-26872768 7 19.5 3194 FBgn0004903 1478.54 66.86666667 102.46 0.013188686 0.291625125 0.190318173 -3 -3 -3 0.15 dme-miR-8-3p 6mer3-8 CAGTAT 3R 26950357 26950362 - 3R_26950357_26950362_- 0.999902846 0.999997701 0.999950274 6.71E-05 CG6330 FBtr0085085|FBtr0085084 26950121|26949690 26950424|26950424 3R - 26950270 26950379 3'utr CG6330 FlyBase G54933.1 ATATGTGCGCATCTCTCCAGTATACAATGATGTTTCAACATTCCCTAGTTTAGCTCTGATTAAGTTCCTAGCTTTATTTCTGTGTATATCGCCCACAACCTCATCGGATA 19 26950352 0.78842745 9 17 135 0.961538462 1.397940009 0.153846154 0.315789474 0.5 19 1 0 25 3R:26950270-26950379 6 CG6330 FBtr0085085|FBtr0085084 26950121|26949690 26950424|26950424 CAGTAT 6mer3-8 dme-miR-8-3p 3R - 26950270 26950384 3'utr CG6330 FlyBase G41474.1 ACATTATATGTGCGCATCTCTCCAGTATACAATGATGTTTCAACATTCCCTAGTTTAGCTCTGATTAAGTTCCTAGCTTTATTTCTGTGTATATCGCCCACAACCTCATCGGATA 16 26950364 0.98081386 10 15 109 0.933333333 1.447158031 0.166666667 0.625 0.8 16 2 0 28 3R:26950270-26950384 6 9 3195 FBgn0039464 58.00333333 3.87 5.813333333 0.155163496 2.325581395 1.548165138 -10 2 -4 0.15 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 26961441 26961447 - 3R_26961441_26961447_- 0.720169579 0.65920257 0.689686075 0.043110179 Tsp97E FBtr0344665|FBtr0336726|FBtr0344664|FBtr0273310 26961062|26961399|26961399|26961062 26962355|26962355|26963005|26963005 3R - 26961412 26961473 3'utr Tsp97E FlyBase G54943.1 ATTAGATAATATTCTCTGTATTCTGTGCTGTGATTGAAGTAAATATGATCTTTAAAACAACA 80 26961450 0.8333937 7 78 767 0.979591837 1.982271233 0.091836735 0.175 0.326530612 80 2 0 96 3R:26961412-26961473 7 Tsp97E FBtr0344664|FBtr0273310|FBtr0336726|FBtr0344665 26961399|26961062|26961399|26961062 26963005|26963005|26962355|26962355 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R - 26961416 26961475 3'utr Tsp97E FlyBase G41480.1 CCATTAGATAATATTCTCTGTATTCTGTGCTGTGATTGAAGTAAATATGATCTTTAAAAC 77 26961450 0.704298682 10 75 741 0.982142857 1.740362689 0.125 0.337662338 0.544642857 77 1 1 110 3R:26961416-26961475 7 72.5 3196 FBgn0039465 1547.256667 107.7333333 165.9533333 0.046857126 0.672957921 0.436869803 3 3 3 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 26961931 26961936 - 3R_26961931_26961936_- 0.994196912 0.999998991 0.997097952 0.004102704 Tsp97E FBtr0344665|FBtr0085082|FBtr0336726|FBtr0344664|FBtr0273310 26961062|26961723|26961399|26961399|26961062 26962355|26962355|26962355|26963005|26963005 3R - 26961891 26961952 3'utr Tsp97E FlyBase G54945.1 AAACATTTCAACAACCTGATCTTACTGTAGAACTAACAACCAGTCAACAATTGTAACTAGCA 25 26961936 0.986643653 4 21 179 0.866666667 0.716003344 0 0.16 0.3 25 0 4 26 3R:26961891-26961952 6 Tsp97E FBtr0344664|FBtr0273310|FBtr0085082|FBtr0336726|FBtr0344665 26961399|26961062|26961723|26961399|26961062 26963005|26963005|26962355|26962355|26962355 TGATCT 6mer3-8 dme-bantam-3p 3R - 26961913 26961957 3'utr Tsp97E FlyBase G41482.1 GAGACAAACATTTCAACAACCTGATCTTACTGTAGAACTAACAAC 20 26961936 0.7814658 5 18 133 0.90625 0.860338007 0.09375 0.4 0.625 20 0 3 29 3R:26961913-26961957 6 22 3197 FBgn0039465 1547.256667 107.7333333 165.9533333 0.014218714 0.204207921 0.132567388 0 0 0 0.15 dme-miR-304-5p 8mer-A1 TGAGATTA 3R 26962097 26962104 - 3R_26962097_26962104_- 0.624911202 0.624875148 0.624893175 2.55E-05 Tsp97E FBtr0344665|FBtr0085082|FBtr0336726|FBtr0344664|FBtr0273310 26961062|26961723|26961399|26961399|26961062 26962355|26962355|26962355|26963005|26963005 3R - 26962078 26962130 3'utr Tsp97E FlyBase G54947.1 ATGTTATTTAATTACAAAACCTCCATTGAGATTATGTTTAGATGTAATAATGT 59 26962105 0.932759732 5 57 562 0.985294118 1.826074803 0.029411765 0.13559322 0.25 59 1 0 67 3R:26962078-26962130 8 Tsp97E FBtr0344664|FBtr0273310|FBtr0085082|FBtr0336726|FBtr0344665 26961399|26961062|26961723|26961399|26961062 26963005|26963005|26962355|26962355|26962355 TGAGATTA 8mer-A1 dme-miR-304-5p 3R - 26962014 26962121 3'utr Tsp97E FlyBase G41483.1 AATTACAAAACCTCCATTGAGATTATGTTTAGATGTAATAATGTAATCTAAGTTTAACCGTTTAAAAGTCCTTAGTTAGCTCTTAATGCCTTTCTTTGCAACTCGCAA 45 26962105 0.834999223 12 45 406 1 1.886490725 0.077922078 0.488888889 0.701298701 45 0 0 77 3R:26962014-26962121 8 47.5 3198 FBgn0039465 1547.256667 107.7333333 165.9533333 0.030699496 0.440903465 0.286225043 1 1 1 0.15 dme-miR-965-3p 7mer-m8 TACGCTT 3R 26977159 26977165 + 3R_26977159_26977165_+ 0.619937152 0.620186329 0.62006174 0.00017614 CG5521 FBtr0301134|FBtr0085069 26976544|26976544 26977878|26977878 3R + 26977135 26977180 3'utr CG5521 FlyBase G46133.1 TTTCTTTCCTTTTATGTCACATTTTACGCTTGGCCACAAGACGCAA 32 26977158 0.975931853 2 32 236 1 1.579783597 0.026315789 0.1875 0.315789474 32 0 0 38 3R:26977135-26977180 7 CG5521 FBtr0301134|FBtr0085069 26976544|26976544 26977878|26977878 TACGCTT 7mer-m8 dme-miR-965-3p 3R + 26977146 26977183 3'utr CG5521 FlyBase G34797.1 TTATGTCACATTTTACGCTTGGCCACAAGACGCAAATT 25 26977158 0.975116231 5 25 161 1 1.612783857 0.12195122 0.4 0.634146341 25 0 0 41 3R:26977146-26977183 7 28.5 3199 FBgn0039466 1133.8 17.58666667 26.86 0.025136708 1.620545868 1.061057334 1 1 1 0.15 dme-miR-8-3p 7mer-A1 AGTATTA 3R 26977290 26977296 + 3R_26977290_26977296_+ 0.583031027 0.658174277 0.620602652 0.053134337 CG5521 FBtr0301134|FBtr0085069 26976544|26976544 26977878|26977878 3R + 26977246 26977325 3'utr CG5521 FlyBase G46134.1 CATAGAAACTTGCTCTGCCCATTCAAAGCAAAACATCAACTACTAGTATTATGTAATCGAGCTATATGTATAGGTATAGG 13 26977267 0.970643767 7 13 77 1 1.204119983 0.1875 0.153846154 0.3125 13 0 0 16 3R:26977246-26977325 7 CG5521 FBtr0301134|FBtr0085069 26976544|26976544 26977878|26977878 AGTATTA 7mer-A1 dme-miR-8-3p 3R + 26977241 26977320 3'utr CG5521 FlyBase G34798.1 TCGAACATAGAAACTTGCTCTGCCCATTCAAAGCAAAACATCAACTACTAGTATTATGTAATCGAGCTATATGTATAGGT 11 26977281 0.977281985 7 10 71 0.944444444 1.230448921 0.166666667 0.363636364 0.611111111 11 1 0 17 3R:26977241-26977320 7 5.5 3200 FBgn0039466 1133.8 17.58666667 26.86 0.004850944 0.312736922 0.20476545 23 9 16 0.15 dme-miR-1003-3p 6mer2-7 TGTGAG 3R 26977395 26977400 + 3R_26977395_26977400_+ 1 0.998636386 0.999318193 0.000964211 CG5521 FBtr0301134|FBtr0085069 26976544|26976544 26977878|26977878 3R + 26977353 26977416 3'utr CG5521 FlyBase G46135.1 TCCAAAACCCTATCAACTGTCGATGGCAATCGTCACTAGGAGTGTGAGTCTTAGAAAGGAAAAC 13 26977397 0.938369143 8 12 71 0.923076923 1.079181246 0.230769231 0 0 13 1 0 12 3R:26977353-26977416 6 CG5521 FBtr0301134|FBtr0085069 26976544|26976544 26977878|26977878 TGTGAG 6mer2-7 dme-miR-1003-3p 3R + 26977373 26977408 3'utr CG5521 FlyBase G34799.1 CGATGGCAATCGTCACTAGGAGTGTGAGTCTTAGAA 10 26977397 0.752140934 6 9 55 0.857142857 1.079181246 0.285714286 0.4 0.571428571 10 2 0 12 3R:26977373-26977408 6 7.5 3201 FBgn0039466 1133.8 17.58666667 26.86 0.006614923 0.426459439 0.279225614 -2 -2 -2 0.15 dme-miR-307a-3p 6mer2-7 GTTGTG 3R 26985305 26985310 + 3R_26985305_26985310_+ 0.756130891 0.738937106 0.747533999 0.012157853 CG14253 FBtr0085072|FBtr0085073|FBtr0085071|FBtr0085070|FBtr0085074|FBtr0331701 26985256|26985256|26985256|26985256|26985256|26985256 26985706|26985706|26985706|26985706|26985706|26985706 3R + 26985277 26985326 3'utr CG14253 FlyBase G46142.1 ATCAGCAATCTCAGGTTTATTTTTATACGTTGTGTTAGTGTTTAGTATAT 6 26985311 0.996960673 4 4 55 0.857142857 0.77815125 0.285714286 0.166666667 0.285714286 6 1 0 6 3R:26985277-26985326 6 CG14253 FBtr0085070|FBtr0085071|FBtr0085073|FBtr0085072|FBtr0331701|FBtr0085074 26985256|26985256|26985256|26985256|26985256|26985256 26985706|26985706|26985706|26985706|26985706|26985706 GTTGTG 6mer2-7 dme-miR-307a-3p 3R + 26985279 26985322 3'utr CG14253 FlyBase G34804.1 CAGCAATCTCAGGTTTATTTTTATACGTTGTGTTAGTGTTTAGT 5 26985311 0.989110198 3 4 41 0.9 0.653212514 0.3 0.6 0.8 5 0 1 9 3R:26985279-26985322 6 3.5 3202 FBgn0039467 5123.18 287.6366667 442.6666667 0.000683169 0.012168129 0.007906627 -6 -6 -6 0.15 dme-miR-1007-3p 7mer-m8 TGAGCTT 3R 26985554 26985560 + 3R_26985554_26985560_+ 0.620195819 0.618960507 0.619578163 0.000873489 CG14253 FBtr0085072|FBtr0085073|FBtr0085071|FBtr0085070|FBtr0085074|FBtr0331701 26985256|26985256|26985256|26985256|26985256|26985256 26985706|26985706|26985706|26985706|26985706|26985706 3R + 26985519 26985605 3'utr CG14253 FlyBase G46144.1 TATTGTTGCATACTCTTGGGCTTATAAGTTCAATCTGAGCTTGAAATATGCCTGGTTAGGCCACATTGTCCAGTCGATTCCTTTGAC 17 26985535 0.985374742 10 16 148 0.913043478 1.322219295 0.173913043 0.294117647 0.47826087 17 2 0 21 3R:26985519-26985605 7 CG14253 FBtr0085070|FBtr0085071|FBtr0085073|FBtr0085072|FBtr0331701|FBtr0085074 26985256|26985256|26985256|26985256|26985256|26985256 26985706|26985706|26985706|26985706|26985706|26985706 TGAGCTT 7mer-m8 dme-miR-1007-3p 3R + 26985507 26985586 3'utr CG14253 FlyBase G34806.1 CTACAATACCATTATTGTTGCATACTCTTGGGCTTATAAGTTCAATCTGAGCTTGAAATATGCCTGGTTAGGCCACATTG 16 26985534 0.941184812 9 15 145 0.954545455 1.322219295 0.136363636 0.3125 0.5 16 1 0 21 3R:26985507-26985586 7 5.5 3203 FBgn0039467 5123.18 287.6366667 442.6666667 0.001073552 0.019121345 0.012424699 19 20 19.5 0.15 dme-miR-980-5p 6mer3-8 GAAAAA 3R 27065047 27065052 - 3R_27065047_27065052_- 0.994843313 0.942155853 0.968499583 0.037255618 spz FBtr0114372|FBtr0112834 27064988|27064988 27065853|27065853 3R - 27064990 27065075 3'utr spz FlyBase G54968.1 AAGAAAGATAGAAATAACGATTTGAAAAATGTATGTTAAAAAAAGATAATGTATAATAAATGTATGCAAGTACATGCCAGCAAAGT 20 27065054 0.896865833 13 19 121 0.96 1.380211242 0.08 0.25 0.4 20 1 0 24 3R:27064990-27065075 6 spz FBtr0114372|FBtr0112834 27064988|27064988 27065853|27065853 GAAAAA 6mer3-8 dme-miR-980-5p 3R - 27064992 27065074 3'utr spz FlyBase G41496.1 AGAAAGATAGAAATAACGATTTGAAAAATGTATGTTAAAAAAAGATAATGTATAATAAATGTATGCAAGTACATGCCAGCAAA 13 27065027 0.956480641 8 11 67 0.8125 1.113943352 0 0.230769231 0.375 13 3 0 13 3R:27064992-27065074 6 7 3204 FBgn0003495 2700.523333 165.5533333 254.8866667 0.00259209 0.042282447 0.027463186 2 -25 -11.5 0.15 dme-miR-283-5p 7mer-m8 TGATATT 3R 27065806 27065812 - 3R_27065806_27065812_- 0.585344916 0.581139305 0.58324211 0.002973808 spz FBtr0114372|FBtr0112834 27064988|27064988 27065853|27065853 3R - 27065780 27065931 stop_codon spz FlyBase G54971.1 AGTGATGGCGAACTGGACGTGGTGCAGAATTCCTTCAAGATCCCTTCCTGCTGCAAGTGCGCGTTGAAGACTGGGTGATTCTGGAAAATGGGATTCTCCAGTCGATGGCTGCGACAATGTGATATTGAGGTGAGGCCACGATTTATTCGTAC 643 27065826 0.976300899 25 616 3948 0.950904393 1.662757832 0.288113695 0.161741835 0.303617571 643 23 15 736 3R:27065780-27065931 7 spz FBtr0114372|FBtr0085137|FBtr0085138|FBtr0085145|FBtr0085140|FBtr0085146|FBtr0112834|FBtr0085139 27064988|27065086|27065086|27065086|27065086|27065086|27064988|27065086 27065853|27065853|27065853|27065853|27065853|27065853|27065853|27065853 TGATATT 7mer-m8 dme-miR-283-5p 3R - 27065792 27065883 stop_codon spz FlyBase G41500.1 TGCTGCAAGTGCGCGTTGAAGACTGGGTGATTCTGGAAAATGGGATTCTCCAGTCGATGGCTGCGACAATGTGATATTGAGGTGAGGCCACG 458 27065826 0.851919049 19 428 2742 0.949567723 1.915795428 0.282420749 0.366812227 0.582132565 458 28 7 659 3R:27065792-27065883 7 325 3205 FBgn0003495 2700.523333 165.5533333 254.8866667 0.120347044 1.963113599 1.275076505 14 14 14 0.15 dme-miR-277-3p 6mer3-8 TGCATT 3R 27108505 27108510 - 3R_27108505_27108510_- 0.861353738 0.869855766 0.865604752 0.006011893 gb FBtr0345216|FBtr0085132 27108465|27108465 27108996|27108996 3R - 27108482 27108614 3'utr gb FlyBase G55019.1 AGGTCGATATTTGCCATATAAAGCAGTTTCATATAATCTTCTGTTGCTTATTGTTTAAAAATTCGGTTATTGTTTTTGTCCCTCATTTTACTACCTAAGTGCATTGCATTGCAGTTTGTAATAAAGATTTTTG 22 27108511 0.964346814 11 20 213 0.888888889 1.380211242 0.148148148 0.181818182 0.333333333 22 3 0 24 3R:27108482-27108614 6 gb FBtr0345216|FBtr0085132 27108465|27108465 27108996|27108996 TGCATT 6mer3-8 dme-miR-277-3p 3R - 27108488 27108544 3'utr gb FlyBase G41542.1 TGTTTTTGTCCCTCATTTTACTACCTAAGTGCATTGCATTGCAGTTTGTAATAAAGA 10 27108511 0.81312508 6 10 93 1 1.079181246 0.166666667 0.2 0.333333333 10 0 0 12 3R:27108488-27108544 6 6.5 3206 FBgn0039487 624.3633333 28.60666667 43.79 0.010410605 0.227219762 0.148435716 1 1 1 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 27108858 27108863 - 3R_27108858_27108863_- 0.875101985 0.881272352 0.878187169 0.004363132 gb FBtr0345216|FBtr0085132 27108465|27108465 27108996|27108996 3R - 27108779 27108899 3'utr gb FlyBase G55021.1 TTGAGAACGAGAAAGCTTGGCTCGTTAAACCTGAATACCAAAAAACGAAAATACCTAAAAAAGCGGAAAACATGACCTGTACATCACAAGGACTGGAGAACGAAGTCAATACTATCATATT 146 27108864 0.939424342 17 122 426 0.938547486 1.748188027 0.117318436 0.179310345 0.335195531 145 9 2 168 3R:27108779-27108899 6 gb FBtr0345216|FBtr0085132 27108465|27108465 27108996|27108996 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 27108779 27108967 3'utr gb FlyBase G41545.1 TTCAAAACGATCTAGCTATTTGGCCCTCCAAATAACTACCTATTAAATCTCTATATTGATGTGAAAGCTTGAGAACGAGAAAGCTTGGCTCGTTAAACCTGAATACCAAAAAACGAAAATACCTAAAAAAGCGGAAAACATGACCTGTACATCACAAGGACTGGAGAACGAAGTCAATACTATCATATT 104 27108864 0.943150634 26 97 403 0.933333333 2.146128036 0.193333333 0.355769231 0.553333333 104 10 0 140 3R:27108779-27108967 6 67.5 3207 FBgn0039487 624.3633333 28.60666667 43.79 0.108110128 2.359589839 1.541447819 1 1 1 0.15 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 27114831 27114836 + 3R_27114831_27114836_+ 0.656560189 0.614477547 0.635518868 0.029756963 CG5815 FBtr0339262|FBtr0085106 27114631|27114631 27115126|27115126 3R + 27114809 27114850 3'utr CG5815 FlyBase G46153.1 GTGCACAGGAAGAAGCGAATTCTGATGAAGATTGGTTTGCTG 7 27114840 0.97487744 4 7 44 1 0.954242509 0.444444444 0.285714286 0.444444444 7 0 0 9 3R:27114809-27114850 6 CG5815 FBtr0339262|FBtr0085106 27114631|27114631 27115126|27115126 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R + 27114798 27114850 3'utr CG5815 FlyBase G34811.1 AAACCAGAGAAGTGCACAGGAAGAAGCGAATTCTGATGAAGATTGGTTTGCTG 7 27114840 0.949350225 4 7 36 1 1.041392685 0.545454545 0.285714286 0.545454545 7 0 0 11 3R:27114798-27114850 6 6.5 3208 FBgn0027574 396.19 21.08 32.38333333 0.01640627 0.308349146 0.200720535 -9 -9 -9 0.15 dme-miR-965-3p 6mer2-7 ACGCTT 3R 27118486 27118491 + 3R_27118486_27118491_+ 0.974707142 0.84451803 0.909612586 0.092057595 CG5880 FBtr0085108 27118289 27118532 3R + 27118453 27118501 3'utr CG5880 FlyBase G46159.1 TTGTTTCCATGACGACTAGGACTAGGCACAATGACGCTTTTATACTACT 58 27118492 0.636881498 6 56 371 0.942857143 1.217483944 0 0.103448276 0.257142857 58 1 3 66 3R:27118453-27118501 6 CG5880 FBtr0085108 27118289 27118532 ACGCTT 6mer2-7 dme-miR-965-3p 3R + 27118453 27118509 3'utr CG5880 FlyBase G34816.1 TTGTTTCCATGACGACTAGGACTAGGCACAATGACGCTTTTATACTACTACTAGCTT 42 27118492 0.758240575 7 40 277 0.956521739 1.819543936 0 0.404761905 0.637681159 42 3 0 66 3R:27118453-27118509 6 48 3209 FBgn0039489 95.00666667 7.643333333 11.70333333 0.505227703 6.279982556 4.101395614 -6 -6 -6 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3R 27125025 27125031 - 3R_27125025_27125031_- 0.521223855 0.521223855 0.521223855 0 CG6051 FBtr0305050|FBtr0339264 27124757|27124757 27125642|27125642 3R - 27125004 27125049 3'utr CG6051 FlyBase G55035.1 TTTTTGCGAAACATTTTTTGTGATTTATCGTAATTTTATATGTATT 71 27125025 0.635087439 10 69 829 0.978723404 1.662757832 0.361702128 0.267605634 0.446808511 71 1 1 92 3R:27125004-27125049 7 CG6051 FBtr0339264|FBtr0305050 27124757|27124757 27125642|27125642 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 27124989 27125094 3'utr CG6051 FlyBase G41560.1 ATTGCGCGATCAAGCTGATTTAGTAGGCGTTAACTGTAGCAGAAATTTTTGCGAAACATTTTTTGTGATTTATCGTAATTTTATATGTATTAATTCGCTTATGTTA 47 27125025 0.992890002 11 45 519 0.970588235 1.51851394 0.308823529 0.319148936 0.529411765 47 1 1 66 3R:27124989-27125094 7 55.5 3210 FBgn0039492 806.82 24.12 36.87 0.068788577 2.300995025 1.505288853 -6 -6 -6 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 27125569 27125574 - 3R_27125569_27125574_- 0.742473406 0.92005612 0.831264763 0.125569931 CG6051 FBtr0305050|FBtr0305050|FBtr0305050|FBtr0339264|FBtr0339264|FBtr0339264|FBtr0113297|FBtr0113297|FBtr0113297 27124757|27124757|27124757|27124757|27124757|27124757|27125436|27125436|27125436 27125642|27125642|27125642|27125642|27125642|27125642|27125642|27125642|27125642 3R - 27125529 27125599 3'utr CG6051 FlyBase G55037.1 GTGGCCGCGATGGAGGAAAAGCAAACTGTGAATCGCAATTGTTCCGCAAACATTGTTTTCTTTATTTTATA 45 27125567 0.845257333 10 44 198 0.98 1.69019608 0.4 0.111111111 0.2 45 1 0 49 3R:27125529-27125599 6 CG6051 FBtr0339264|FBtr0339264|FBtr0339264|FBtr0113297|FBtr0113297|FBtr0113297|FBtr0305050|FBtr0305050|FBtr0305050 27124757|27124757|27124757|27125436|27125436|27125436|27124757|27124757|27124757 27125642|27125642|27125642|27125642|27125642|27125642|27125642|27125642|27125642 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 27125530 27125619 3'utr CG6051 FlyBase G41561.1 CGCAGCTGACGACCAAAAATGTGGCCGCGATGGAGGAAAAGCAAACTGTGAATCGCAATTGTTCCGCAAACATTGTTTTCTTTATTTTAT 33 27125567 0.932687329 9 31 118 0.893617021 1.62324929 0.446808511 0.303030303 0.510638298 33 5 0 42 3R:27125530-27125619 6 34 3211 FBgn0039492 806.82 24.12 36.87 0.04214075 1.409618574 0.922158937 -7 -7 -7 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 27156744 27156750 + 3R_27156744_27156750_+ 0.801946764 0.801965945 0.801956355 1.35E-05 Men-b FBtr0085110|FBtr0085110|FBtr0085110 27156373|27156373|27156373 27157603|27157603|27157603 3R + 27156721 27156769 3'utr Men-b FlyBase G46176.1 AAAAATTATCATGTTATTAATTTTGTGATACCGAAACGTACGATACTAA 27 27156742 0.8680529 5 24 244 0.909090909 0.875061263 0.181818182 0.148148148 0.303030303 27 0 3 30 3R:27156721-27156769 7 Men-b FBtr0085110|FBtr0085110|FBtr0085110 27156373|27156373|27156373 27157603|27157603|27157603 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 27156709 27156846 3'utr Men-b FlyBase G34826.1 TTTTATATATGTAAAAATTATCATGTTATTAATTTTGTGATACCGAAACGTACGATACTAAATGACGACATTGACATGACGACTGTGACGGTGACTACGCCTTCGAAAAAGCAATTACGCAGTATTCTATTCTATCCT 29 27156742 0.987137413 15 26 228 0.875 0.942008053 0.075 0.310344828 0.5 29 2 3 35 3R:27156709-27156846 7 20.5 3212 FBgn0029155 3172.966667 116.5433333 178.2166667 0.006460831 0.175900237 0.115028523 2 2 2 0.15 dme-miR-980-3p 6mer2-7 GCAGCT 3R 27157450 27157455 + 3R_27157450_27157455_+ 0.983336658 0.990410795 0.986873727 0.005002144 Men-b FBtr0301708|FBtr0085110 27157162|27156373 27157603|27157603 3R + 27157436 27157474 3'utr Men-b FlyBase G46179.1 ATTAACGCAATTAAGCAGCTTTGTTATAATTTATTGTTA 10 27157457 0.619581124 5 9 80 0.933333333 0.84509804 0 0.5 0.666666667 10 0 1 14 3R:27157436-27157474 6 Men-b FBtr0085110|FBtr0301708 27156373|27157162 27157603|27157603 GCAGCT 6mer2-7 dme-miR-980-3p 3R + 27157434 27157478 3'utr Men-b FlyBase G34827.1 TTATTAACGCAATTAAGCAGCTTTGTTATAATTTATTGTTAAAAG 6 27157456 0.976406744 5 5 41 1 0.84509804 0.428571429 0.4 0.571428571 5 0 0 7 3R:27157434-27157478 6 7 3213 FBgn0029155 3172.966667 116.5433333 178.2166667 0.002206137 0.060063496 0.039278032 -7 -6 -6.5 0.15 dme-miR-12-5p 6mer3-8 AATACT 3R 27172369 27172374 - 3R_27172369_27172374_- 0.53896693 0.531662848 0.535314889 0.005164779 Ser FBtr0085128|FBtr0344121 27172088|27172088 27172990|27172990 3R - 27172372 27172427 3'utr Ser FlyBase G55056.1 TGTATATAGTTCTCATTTAGGATCGTCGCGCTCTATATTGTGTATAAGCTGTAAAT 18 27172390 0.715436033 9 17 144 0.958333333 1.361727836 0.25 0.222222222 0.416666667 18 1 0 23 3R:27172372-27172427 2 Ser FBtr0085128|FBtr0344121 27172088|27172088 27172990|27172990 AATACT 6mer3-8 dme-miR-12-5p 3R - 27172320 27172426 3'utr Ser FlyBase G41571.1 GTATATAGTTCTCATTTAGGATCGTCGCGCTCTATATTGTGTATAAGCTGTAAATACTGTAAATTAGCAGTTACCGTTATTGTATTTTGTCTATAGTTAGATTGGTA 46 27172391 0.730521557 15 45 457 0.985915493 1.84509804 0.267605634 0.413043478 0.61971831 46 1 0 70 3R:27172320-27172426 6 4 3214 FBgn0004197 511.3333333 10.63 16.37666667 0.007822686 0.376293509 0.244249949 16 17 16.5 0.15 dme-miR-283-5p 8mer-m1 TGATATTT 3R 27172513 27172520 - 3R_27172513_27172520_- 0.546150972 0.540234521 0.543192746 0.004183597 Ser FBtr0085128|FBtr0344121 27172088|27172088 27172990|27172990 3R - 27172485 27172581 3'utr Ser FlyBase G55057.1 ATTTAAGTTAGATAGTGTAATTCCGAACTCTTCTCTTCGCTAAGCAACATCCTACACAGTGTGATATTTAGTGTAACCCAGGCGCGCATTTACATTC 93 27172514 0.668737143 14 88 691 0.954954955 2.025305865 0.063063063 0.161290323 0.297297297 93 5 0 106 3R:27172485-27172581 8 Ser FBtr0085128|FBtr0344121 27172088|27172088 27172990|27172990 TGATATTT 8mer-m1 dme-miR-283-5p 3R - 27172483 27172612 3'utr Ser FlyBase G41572.1 GCAGTGCCATGTCGATGTGGAAGCCCAAAATATTTAAGTTAGATAGTGTAATTCCGAACTCTTCTCTTCGCTAAGCAACATCCTACACAGTGTGATATTTAGTGTAACCCAGGCGCGCATTTACATTCAT 84 27172514 0.985359712 16 78 630 0.95620438 1.8162413 0.072992701 0.404761905 0.635036496 84 5 1 131 3R:27172483-27172612 8 65.5 3215 FBgn0004197 511.3333333 10.63 16.37666667 0.12809648 6.161806209 3.999592917 -6 -6 -6 0.15 dme-miR-276a-3p 6mer3-8 AGTTCC 3R 27172927 27172932 - 3R_27172927_27172932_- 0.995267169 0.998391959 0.996829564 0.002209567 Ser FBtr0085128|FBtr0344121 27172088|27172088 27172990|27172990 3R - 27172840 27172957 3'utr Ser FlyBase G55061.1 AACCAGCCGCCCACAGCCAGCTCAAAGTTCCAATTGCCACAGCACGGGCGCTATTTCCAAGTGCATTAGTAGCGTAATTAAAACTAGGATATTGTTAAGGATACCAAGGTAGGCCACA 38 27172923 0.958965659 13 37 180 0.976190476 1.311753861 0.023809524 0.105263158 0.19047619 38 0 1 41 3R:27172840-27172957 6 Ser FBtr0085128|FBtr0344121 27172088|27172088 27172990|27172990 AGTTCC 6mer3-8 dme-miR-276a-3p 3R - 27172870 27172950 3'utr Ser FlyBase G41574.1 CGCCCACAGCCAGCTCAAAGTTCCAATTGCCACAGCACGGGCGCTATTTCCAAGTGCATTAGTAGCGTAATTAAAACTAGG 20 27172924 0.951459693 6 17 83 0.888888889 1.380211242 0 0.35 0.518518519 20 3 0 24 3R:27172870-27172950 6 18.5 3216 FBgn0004197 511.3333333 10.63 16.37666667 0.036179922 1.740357479 1.129656015 -9 -8 -8.5 0.15 dme-miR-970-3p 7mer-A1 CTTATGA 3R 27227490 27227496 - 3R_27227490_27227496_- 0.820028542 0.595358494 0.707693518 0.158865681 CG42813 FBtr0303825|FBtr0347068 27227438|27227068 27227706|27227706 3R - 27227450 27227577 3'utr CG42813 FlyBase G55075.1 ATGCTTTCCAACCGAGCGCATTGTGAGTGCGCCTAGCGCACACGATATAATACTGAAATTCCCGTGCCTGTCGAGGCTTACCTTATGATATGTATACCGTGTAATATGTAATAAACCCTGGCCAGCTG 18 27227499 0.977203213 9 18 120 1 1.301029996 0.05 0.111111111 0.2 18 0 0 20 3R:27227450-27227577 7 CG42813 FBtr0347068|FBtr0303825 27227068|27227438 27227706|27227706 CTTATGA 7mer-A1 dme-miR-970-3p 3R - 27227489 27227516 3'utr CG42813 FlyBase G41582.1 CCGTGCCTGTCGAGGCTTACCTTATGAT 6 27227499 0.656531759 3 5 41 0.888888889 0.903089987 0.111111111 0.5 0.666666667 6 1 0 8 3R:27227489-27227516 7 7 3217 FBgn0261995 209.3266667 26.48666667 40.32666667 0.033440555 0.264283916 0.17358241 3 3 3 0.15 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 27242373 27242378 - 3R_27242373_27242378_- 0.999850407 0.999983187 0.999916797 9.39E-05 CG18766 FBtr0333327|FBtr0085122|FBtr0085123 27242333|27242333|27242333 27242709|27242709|27242709 3R - 27242365 27242489 3'utr CG18766 FlyBase G55085.1 CGATCGCGCCCTCGATACAGAGTTGACTTCCGTAAAGAGGGGGCTGGATCGATCAATCGTGCATAGAGATCCTAGGGAGTACATTACATTTAGACACCATTTCCTACTGTTAGCTGTAAACTATT 64 27242389 0.828264264 17 58 498 0.935897436 1.562292864 0.141025641 0.1875 0.333333333 64 4 1 73 3R:27242365-27242489 6 CG18766 FBtr0085123|FBtr0085122|FBtr0333327 27242333|27242333|27242333 27242709|27242709|27242709 AGCTGT 6mer3-8 dme-miR-1008-3p 3R - 27242359 27242452 3'utr CG18766 FlyBase G41586.1 AGGGGGCTGGATCGATCAATCGTGCATAGAGATCCTAGGGAGTACATTACATTTAGACACCATTTCCTACTGTTAGCTGTAAACTATTATGCAT 40 27242389 0.862003502 10 38 310 0.98 1.69019608 0.22 0.2 0.36 40 1 0 49 3R:27242359-27242452 6 36 3218 FBgn0042111 927.4033333 71.10333333 109.1233333 0.038818062 0.506305377 0.329901946 11 11 11 0.15 dme-miR-8-3p 7mer-m8 CAGTATT 3R 27242531 27242537 - 3R_27242531_27242537_- 0.661615196 0.66161486 0.661615028 2.12E-07 CG18766 FBtr0333327|FBtr0085122|FBtr0085123 27242333|27242333|27242333 27242709|27242709|27242709 3R - 27242490 27242549 3'utr CG18766 FlyBase G55085.2 ACACACGGCATACAGTATTTTTTGTATAGTTAAAATATACATTGGAGTTTTAGTTCTCGA 58 27242539 0.907122899 11 53 523 0.925373134 1.315270435 0 0.155172414 0.268656716 58 3 2 62 3R:27242490-27242549 7 CG18766 FBtr0085123|FBtr0085122|FBtr0333327 27242333|27242333|27242333 27242709|27242709|27242709 CAGTATT 7mer-m8 dme-miR-8-3p 3R - 27242476 27242548 3'utr CG18766 FlyBase G41587.1 CACACGGCATACAGTATTTTTTGTATAGTTAAAATATACATTGGAGTTTTAGTTCTCGACGATCGCGCCCTCG 27 27242529 0.990119859 7 25 250 0.925 1.568201724 0.05 0.333333333 0.55 27 3 0 37 3R:27242476-27242548 7 36 3219 FBgn0042111 927.4033333 71.10333333 109.1233333 0.038818062 0.506305377 0.329901946 2 -8 -3 0.15 dme-miR-970-3p 6mer3-8 TCTTAT 3R 27256336 27256341 + 3R_27256336_27256341_+ 0.998653682 0.998803286 0.998728484 0.000105783 TfIIA-L FBtr0085156|FBtr0085155|FBtr0085154 27256140|27256140|27256140 27256463|27256463|27256463 3R + 27256314 27256423 3'utr TfIIA-L FlyBase G46196.1 ACGTACTCGGGCCGACACTGTATCTTATTTTAGTTCCATCTGTTTTGTATTACGATAGCTTAAGGGTGTGTTGCAACCAACCATCTCGATTAAATGTATTAGAGTGCCGC 19 27256336 0.982208629 10 18 141 1 1.322219295 0.238095238 0.105263158 0.19047619 19 0 0 21 3R:27256314-27256423 6 TfIIA-L FBtr0085154|FBtr0085155|FBtr0085156 27256140|27256140|27256140 27256463|27256463|27256463 TCTTAT 6mer3-8 dme-miR-970-3p 3R + 27256310 27256346 3'utr TfIIA-L FlyBase G34842.1 AGCAACGTACTCGGGCCGACACTGTATCTTATTTTAG 9 27256333 0.783779911 6 9 56 1 1.255272505 0.166666667 0.333333333 0.666666667 9 0 0 18 3R:27256310-27256346 6 8.5 3220 FBgn0011289 653.3333333 54.7 83.7 0.013010204 0.155393053 0.101553166 0 3 1.5 0.15 dme-miR-1012-3p 8mer-A1 TTGACTAA 3R 27257031 27257038 - 3R_27257031_27257038_- 0.62699405 0.6268142 0.626904125 0.000127138 woc FBtr0085178|FBtr0334730|FBtr0112857|FBtr0334731 27256593|27256593|27256593|27256593 27257305|27257305|27257305|27257305 3R - 27256966 27257130 5'utr-coding woc FlyBase G55098.1 ACGCATATTTCGATTGTCTCTAGTTGCGATAACGCTGATGGAGGTGACCTTGTATAAAATGTGAACGCCAACCAAGCACATCTCACTTTCGATTGACTAAACTTAATCTAGGAATCAAAAAAATCCAAGCAGCAATATACACAACTAAACTTAACACCCACTCAC 44 27257038 0.898756544 18 41 267 0.957446809 1.352182518 0.234042553 0.068181818 0.127659574 44 1 1 45 3R:27256966-27257130 8 woc FBtr0112857|FBtr0334731|FBtr0085178|FBtr0334730 27256593|27256593|27256593|27256593 27257305|27257305|27257305|27257305 TTGACTAA 8mer-A1 dme-miR-1012-3p 3R - 27256964 27257130 5'utr-coding woc FlyBase G41595.1 ACGCATATTTCGATTGTCTCTAGTTGCGATAACGCTGATGGAGGTGACCTTGTATAAAATGTGAACGCCAACCAAGCACATCTCACTTTCGATTGACTAAACTTAATCTAGGAATCAAAAAAATCCAAGCAGCAATATACACAACTAAACTTAACACCCACTCACAT 31 27257038 0.977449356 15 31 200 1 1.672097858 0.085106383 0.419354839 0.617021277 31 0 0 47 3R:27256964-27257130 8 14 3221 FBgn0010328 3628.043333 70.90333333 108.5766667 0.003858829 0.19745193 0.128941148 0 0 0 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3R 27277338 27277343 - 3R_27277338_27277343_- 0.646630875 0.667769048 0.657199961 0.014946894 mrt FBtr0305972|FBtr0085174|FBtr0305971|FBtr0305974|FBtr0305975|FBtr0305973 27277247|27277247|27277247|27277247|27277247|27277247 27277589|27277589|27277589|27277589|27277589|27277589 3R - 27277326 27277374 3'utr mrt FlyBase G55150.1 ATGTATTTATTGTTCATCAACCGTCTATGCCCCAAAGTGCTGTAAAGTT 155 27277347 0.909883147 6 151 983 0.978021978 1.773298748 0.17032967 0.141935484 0.269230769 155 2 2 178 3R:27277326-27277374 6 mrt FBtr0305975|FBtr0305973|FBtr0305971|FBtr0305974|FBtr0305972|FBtr0085174 27277247|27277247|27277247|27277247|27277247|27277247 27277589|27277589|27277589|27277589|27277589|27277589 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 27277325 27277377 3'utr mrt FlyBase G41634.1 AAAATGTATTTATTGTTCATCAACCGTCTATGCCCCAAAGTGCTGTAAAGTTA 121 27277347 0.911576184 5 113 790 0.938888889 1.324796718 0.211111111 0.314049587 0.538888889 121 4 7 169 3R:27277325-27277377 6 132.5 3222 FBgn0039507 449.7733333 19.81666667 30.52666667 0.294592832 6.686291001 4.340467351 4 4 4 0.15 dme-miR-14-3p 6mer3-8 AAGACT 3R 27277424 27277429 - 3R_27277424_27277429_- 0.999999931 0.999969333 0.999984632 2.16E-05 mrt FBtr0305972|FBtr0085174|FBtr0305971|FBtr0305974|FBtr0305975|FBtr0305973 27277247|27277247|27277247|27277247|27277247|27277247 27277589|27277589|27277589|27277589|27277589|27277589 3R - 27277394 27277467 3'utr mrt FlyBase G55151.1 ATATATATATTCCTAGAGCCAGACCCGCGCATTGTTAAAAGACTTGATTATATTTAAGCATTAATACATAAATG 90 27277421 0.960337608 13 80 707 0.897196262 1.505149978 0.242990654 0.155555556 0.289719626 90 9 2 96 3R:27277394-27277467 6 mrt FBtr0305975|FBtr0305973|FBtr0305971|FBtr0305974|FBtr0305972|FBtr0085174 27277247|27277247|27277247|27277247|27277247|27277247 27277589|27277589|27277589|27277589|27277589|27277589 AAGACT 6mer3-8 dme-miR-14-3p 3R - 27277383 27277469 3'utr mrt FlyBase G41635.1 ATATATATATATTCCTAGAGCCAGACCCGCGCATTGTTAAAAGACTTGATTATATTTAAGCATTAATACATAAATGAAACCTAAAGT 67 27277421 0.989928223 11 58 572 0.901098901 1.311753861 0.428571429 0.208955224 0.417582418 67 6 3 82 3R:27277383-27277469 6 66 3223 FBgn0039507 449.7733333 19.81666667 30.52666667 0.14674058 3.330529857 2.162044114 -8 -8 -8 0.15 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 27548254 27548261 - 3R_27548254_27548261_- 0.385560628 0.385300086 0.385430357 0.000184201 Klp98A FBtr0085211|FBtr0304671 27547773|27547773 27548733|27548733 3R - 27548235 27548309 3'utr Klp98A FlyBase G55172.1 TATACGCATAGGTGTACGACTTCCAAAAAGTTATTCCAGTTATTTAGTCTGTGATTGCCAACTGAAGTTATAGAT 51 27548254 0.852845016 12 49 468 0.967741935 1.77815125 0.064516129 0.117647059 0.274193548 51 2 0 60 3R:27548235-27548309 8 Klp98A FBtr0085211|FBtr0304671 27547773|27547773 27548733|27548733 CTGTGATT 8mer-m1 dme-miR-308-3p 3R - 27548234 27548278 3'utr Klp98A FlyBase G41649.1 TATTCCAGTTATTTAGTCTGTGATTGCCAACTGAAGTTATAGATC 32 27548254 0.81003435 5 28 296 0.894736842 1.707570176 0.01754386 0.5 0.719298246 32 6 0 51 3R:27548234-27548278 8 38 3224 FBgn0004387 717.51 15.74333333 24.23 0.052960934 2.413720093 1.568303756 -7 -7 -7 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 27562765 27562770 - 3R_27562765_27562770_- 0.999926326 0.99983038 0.999878353 6.78E-05 wdb FBtr0085205|FBtr0085205|FBtr0085205|FBtr0085204|FBtr0085204|FBtr0085204|FBtr0085208|FBtr0085208|FBtr0085208 27561673|27561673|27561673|27561673|27561673|27561673|27561673|27561673|27561673 27565568|27565568|27565568|27565568|27565568|27565568|27565568|27565568|27565568 3R - 27562728 27562780 3'utr wdb FlyBase G55187.1 TCGTTTGTTTTGTGATCAACACCTTTGTTGCACTCTGAGTTAATCTGTTTAGT 9 27562771 0.990109938 6 9 96 1 1.079181246 0.666666667 0.222222222 0.416666667 9 0 0 12 3R:27562728-27562780 6 wdb FBtr0085208|FBtr0085208|FBtr0085208|FBtr0085204|FBtr0085204|FBtr0085204|FBtr0085205|FBtr0085205|FBtr0085205 27561673|27561673|27561673|27561673|27561673|27561673|27561673|27561673|27561673 27565568|27565568|27565568|27565568|27565568|27565568|27565568|27565568|27565568 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 27562754 27562807 3'utr wdb FlyBase G41661.1 AATGATTATTGCCTCTTCATCATCATTTCGTTTGTTTTGTGATCAACACCTTTG 12 27562771 0.994136184 4 9 124 0.888888889 0.726998728 0.277777778 0.333333333 0.555555556 12 0 2 16 3R:27562754-27562807 6 8.5 3225 FBgn0027492 2914.523333 83.19 128.17 0.002916429 0.102175742 0.066318171 1 1 1 0.15 dme-miR-2535b-3p 7mer-m1 CGTGAGT 3R 27563627 27563633 - 3R_27563627_27563633_- 0.763047958 0.565751181 0.66439957 0.139509905 wdb FBtr0085205|FBtr0085204|FBtr0085208 27561673|27561673|27561673 27565568|27565568|27565568 3R - 27563618 27563653 3'utr wdb FlyBase G55189.1 TGATAATTGTGTCTGTGAATCGTGAGTTATTATACA 12 27563627 0.791279343 4 11 108 0.928571429 1.113943352 0.357142857 0.166666667 0.285714286 12 1 0 13 3R:27563618-27563653 7 wdb FBtr0085208|FBtr0085204|FBtr0085205 27561673|27561673|27561673 27565568|27565568|27565568 CGTGAGT 7mer-m1 dme-miR-2535b-3p 3R - 27563614 27563655 3'utr wdb FlyBase G41663.1 AATGATAATTGTGTCTGTGAATCGTGAGTTATTATACACATA 15 27563645 0.700494477 6 15 136 1 1.322219295 0.238095238 0.266666667 0.476190476 15 0 0 21 3R:27563614-27563655 7 13 3226 FBgn0027492 2914.523333 83.19 128.17 0.004460421 0.156268782 0.101427791 -6 12 3 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 27564381 27564386 - 3R_27564381_27564386_- 0.999944801 0.992665243 0.996305022 0.005147455 wdb FBtr0085205|FBtr0085204|FBtr0085208 27561673|27561673|27561673 27565568|27565568|27565568 3R - 27564341 27564395 3'utr wdb FlyBase G55193.1 GATAAACGCTGATCTATATAAATGTATGTAAAGTGTAAAGCGGCGGATACACAAA 8 27564378 0.97757128 6 8 55 1 1 0.5 0.25 0.4 8 0 0 10 3R:27564341-27564395 6 wdb FBtr0085208|FBtr0085204|FBtr0085205 27561673|27561673|27561673 27565568|27565568|27565568 TGATCT 6mer3-8 dme-bantam-3p 3R - 27564373 27564405 3'utr wdb FlyBase G41664.1 TATAACGTACGATAAACGCTGATCTATATAAAT 7 27564379 0.741171191 4 7 43 1 1.041392685 0 0.285714286 0.545454545 7 0 0 11 3R:27564373-27564405 6 7 3227 FBgn0027492 2914.523333 83.19 128.17 0.002401765 0.084144729 0.054614965 -8 -7 -7.5 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 27585541 27585546 + 3R_27585541_27585546_+ 0.99896196 0.999950502 0.999456231 0.000698975 pins FBtr0085189 27585321 27586376 3R + 27585479 27585565 3'utr pins FlyBase G46255.1 AAGATTTATATATACACACGTACACGAAAAGCATTAATTTATGAATAGCAACTAACCACGTAACCAAATATTAGGGGTGTATAGGGC 8 27585549 0.942401673 6 8 37 1 0.903089987 0.5 0 0 8 0 0 8 3R:27585479-27585565 6 pins FBtr0085189 27585321 27586376 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 27585525 27585568 3'utr pins FlyBase G34896.1 AGCAACTAACCACGTAACCAAATATTAGGGGTGTATAGGGCCTC 5 27585549 0.971052433 3 4 24 0.857142857 0.77815125 0.142857143 0.4 0.571428571 5 1 0 6 3R:27585525-27585568 6 4 3228 FBgn0040080 1104.993333 40.80333333 62.47 0.003619931 0.098031207 0.064030735 -8 -8 -8 0.15 dme-miR-7-5p 6mer3-8 GTCTTC 3R 27585774 27585779 + 3R_27585774_27585779_+ 0.999997958 0.998183281 0.99909062 0.001283187 pins FBtr0085189 27585321 27586376 3R + 27585701 27585786 3'utr pins FlyBase G46257.1 AATTGCATGTGCAAGTAGTTTAAGCCGGATAATACTAATGTACTAATCCAATTTGCTCAATAGACGGAACCAAGTCTTCTCTACGA 11 27585754 0.965539612 9 11 60 1 1.146128036 0.214285714 0.272727273 0.428571429 11 0 0 14 3R:27585701-27585786 6 pins FBtr0085189 27585321 27586376 GTCTTC 6mer3-8 dme-miR-7-5p 3R + 27585738 27585778 3'utr pins FlyBase G34898.1 ATGTACTAATCCAATTTGCTCAATAGACGGAACCAAGTCTT 5 27585753 0.977323709 4 4 25 0.8 0.602059991 0 0 0 5 1 0 4 3R:27585738-27585778 5 3 3229 FBgn0040080 1104.993333 40.80333333 62.47 0.002714949 0.073523405 0.048023051 20 21 20.5 0.15 dme-miR-980-3p 6mer3-8 GGCAGC 3R 27598074 27598079 - 3R_27598074_27598079_- 0.999510896 0.999543668 0.999527282 2.32E-05 dsd FBtr0335247|FBtr0301390 27597561|27597759 27599034|27599034 3R - 27598058 27598103 3'utr dsd FlyBase G55223.1 AAACTAATCGTAAGGTTTCCTCTTGGCAGCAGCAAACAAACAAAAA 40 27598080 0.966817754 2 40 216 1 1.698970004 0.06 0.2 0.36 40 0 0 50 3R:27598058-27598103 6 dsd FBtr0335247|FBtr0301390 27597561|27597759 27599034|27599034 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 27598059 27598104 3'utr dsd FlyBase G41686.1 CAAACTAATCGTAAGGTTTCCTCTTGGCAGCAGCAAACAAACAAAA 28 27598080 0.970932985 2 28 162 1 1.556302501 0.222222222 0.285714286 0.444444444 28 0 0 36 3R:27598059-27598104 6 34 3230 FBgn0039528 2636.286667 54.87666667 84.28333333 0.012896928 0.61957116 0.403401226 1 1 1 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 27598484 27598489 - 3R_27598484_27598489_- 0.960517692 0.973538852 0.967028272 0.009207379 dsd FBtr0335247|FBtr0301390 27597561|27597759 27599034|27599034 3R - 27598439 27598507 3'utr dsd FlyBase G55225.1 AAACAAAAGACATTCAATTGATCTTAGCAAAAAAAAAAGTGATGAACCAAACCAGAGGACAGGCAGACA 20 27598489 0.970494347 4 20 110 1 1.462397998 0 0.35 0.551724138 20 0 0 29 3R:27598439-27598507 6 dsd FBtr0335247|FBtr0301390 27597561|27597759 27599034|27599034 TGATCT 6mer3-8 dme-bantam-3p 3R - 27598443 27598506 3'utr dsd FlyBase G41688.2 AACAAAAGACATTCAATTGATCTTAGCAAAAAAAAAAGTGATGAACCAAACCAGAGGACAGGCA 22 27598489 0.974488327 5 21 116 0.96969697 1.505149978 0.090909091 0.409090909 0.606060606 22 1 0 32 3R:27598443-27598506 6 18.5 3231 FBgn0039528 2636.286667 54.87666667 84.28333333 0.007017446 0.337119602 0.219497726 0 0 0 0.15 dme-miR-1003-3p 6mer2-7 TGTGAG 3R 27598556 27598561 - 3R_27598556_27598561_- 0.844322902 0.725832147 0.785077525 0.083785648 dsd FBtr0335247|FBtr0301390 27597561|27597759 27599034|27599034 3R - 27598509 27598575 3'utr dsd FlyBase G55226.1 ATTTATGCAAATTTTGTGAGCTGCCCCGGCAGCAGTTGCACCATATGCCGCGACAGAAACAGAGTTA 35 27598562 0.976797909 6 33 211 0.928571429 1.290034611 0.238095238 0.2 0.333333333 35 2 1 39 3R:27598509-27598575 6 dsd FBtr0335247|FBtr0301390 27597561|27597759 27599034|27599034 TGTGAG 6mer2-7 dme-miR-1003-3p 3R - 27598538 27598572 3'utr dsd FlyBase G41689.1 TATGCAAATTTTGTGAGCTGCCCCGGCAGCAGTTG 15 27598562 0.580762985 4 12 94 0.826086957 0.801632346 0.086956522 0.533333333 0.695652174 15 2 2 19 3R:27598538-27598572 6 24 3232 FBgn0039528 2636.286667 54.87666667 84.28333333 0.009103714 0.437344348 0.284753807 1 1 1 0.15 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 27639105 27639112 + 3R_27639105_27639112_+ 0.631112344 0.63113049 0.631121417 1.29E-05 Mtl FBtr0085192|FBtr0085193 27638699|27638699 27639871|27639871 3R + 27639078 27639156 3'utr Mtl FlyBase G46263.1 AAATCTAATGCACTACATATGTAGAAATCTAGTCAATTGAATCGAATGTATTGTACGAATAGTATCTGGCAGAAAGAGA 45 27639105 0.984277687 10 42 334 0.928571429 1.113943352 0.517857143 0.155555556 0.321428571 45 1 3 52 3R:27639078-27639156 8 Mtl FBtr0085193|FBtr0085192 27638699|27638699 27639871|27639871 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 27639078 27639153 3'utr Mtl FlyBase G34904.1 AAATCTAATGCACTACATATGTAGAAATCTAGTCAATTGAATCGAATGTATTGTACGAATAGTATCTGGCAGAAAG 48 27639114 0.985072996 10 42 334 0.902777778 1.511883361 0.430555556 0.416666667 0.611111111 48 6 1 65 3R:27639078-27639153 8 44 3233 FBgn0039532 1160.21 67.97 104.5233333 0.037924169 0.647344417 0.420958638 0 -9 -4.5 0.15 dme-miR-283-5p 7mer-m8 TGATATT 3R 27639341 27639347 + 3R_27639341_27639347_+ 0.620021165 0.618868958 0.619445061 0.000814728 Mtl FBtr0085192|FBtr0085193 27638699|27638699 27639871|27639871 3R + 27639306 27639361 3'utr Mtl FlyBase G46265.1 ACTTGACGACGAGCTCTTAGAGAAGCCACTTTTTATGATATTCAAGCATGCGCATT 7 27639341 0.986785929 3 7 56 1 0.84509804 0 0 0 7 0 0 7 3R:27639306-27639361 7 Mtl FBtr0085193|FBtr0085192 27638699|27638699 27639871|27639871 TGATATT 7mer-m8 dme-miR-283-5p 3R + 27639287 27639352 3'utr Mtl FlyBase G34906.1 TCTGAAACCAGGCCAATTCACTTGACGACGAGCTCTTAGAGAAGCCACTTTTTATGATATTCAAGC 7 27639322 0.977519334 3 6 40 0.928571429 1.113943352 0.357142857 0.714285714 0.857142857 7 1 0 13 3R:27639287-27639352 7 4 3234 FBgn0039532 1160.21 67.97 104.5233333 0.003447652 0.058849492 0.038268967 0 19 9.5 0.15 dme-miR-2535b-3p 6mer3-8 CCGTGA 3R 27639809 27639814 + 3R_27639809_27639814_+ 0.995688239 0.993959833 0.994824036 0.001222163 Mtl FBtr0085192|FBtr0085193 27638699|27638699 27639871|27639871 3R + 27639753 27639831 3'utr Mtl FlyBase G46267.1 AAGTCTTATGTAAATGAAATGTAAACGAAGGCCGTTTGGCTCCAGCGATGTAGTAGCCGTGAAACAGATTTAATACTTA 11 27639806 0.957128157 6 11 56 1 1.113943352 0.153846154 0.181818182 0.307692308 11 0 0 13 3R:27639753-27639831 6 Mtl FBtr0085193|FBtr0085192 27638699|27638699 27639871|27639871 CCGTGA 6mer3-8 dme-miR-2535b-3p 3R + 27639789 27639816 3'utr Mtl FlyBase G34908.1 TGGCTCCAGCGATGTAGTAGCCGTGAAA 5 27639806 0.770466242 2 5 19 1 0.903089987 0.375 0.6 0.75 5 0 0 8 3R:27639789-27639816 6 6 3235 FBgn0039532 1160.21 67.97 104.5233333 0.005171478 0.088274239 0.057403451 3 3 3 0.15 dme-miR-184-3p 6mer2-7 CCGTCC 3R 27680148 27680153 + 3R_27680148_27680153_+ 0.99471855 0.948825307 0.971771929 0.032451464 CG12883 FBtr0085216 27679952 27680336 3R + 27680133 27680200 3'utr CG12883 FlyBase G46280.1 ACGAAGAAACGGAAACCGTCCTCCTATCTCATTGTGGCTTCCGAGTCGTGCTAGAGCCTAAGCTCACC 19 27680154 0.983849375 7 13 102 0.7 1.146128036 0.05 0.052631579 0.1 19 6 0 14 3R:27680133-27680200 6 CG12883 FBtr0085216 27679952 27680336 CCGTCC 6mer2-7 dme-miR-184-3p 3R + 27680135 27680190 3'utr CG12883 FlyBase G34920.2 GAAGAAACGGAAACCGTCCTCCTATCTCATTGTGGCTTCCGAGTCGTGCTAGAGCC 9 27680164 0.885198103 6 6 53 0.857142857 1.079181246 0 0.444444444 0.642857143 9 2 0 12 3R:27680135-27680190 6 7 3236 FBgn0039538 103.9833333 13.51666667 20.85666667 0.067318481 0.517879162 0.335624101 -6 -16 -11 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 27696484 27696491 + 3R_27696484_27696491_+ 0.650117884 0.65009131 0.650104597 1.88E-05 CG43320 FBtr0306924|FBtr0306924|FBtr0306924 27696450|27696450|27696450 27696531|27696531|27696531 3R + 27696460 27696503 3'utr CG43320 FlyBase G46282.1 ACGTGTCTAGGGTAAGAACGTTTACTGTGATACGTGATAATAAT 61 27696481 0.756387817 6 60 503 0.985294118 1.826074803 0.455882353 0.114754098 0.205882353 61 1 0 67 3R:27696460-27696503 8 CG43320 FBtr0306924|FBtr0306924|FBtr0306924 27696450|27696450|27696450 27696531|27696531|27696531 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 27696459 27696500 3'utr CG43320 FlyBase G34922.1 CACGTGTCTAGGGTAAGAACGTTTACTGTGATACGTGATAAT 39 27696481 0.761456478 4 38 315 0.98245614 1.748188027 0.596491228 0.333333333 0.543859649 39 1 0 56 3R:27696459-27696500 8 50 3237 FBgn0263025 42.64 4.076666667 6.266666667 1.17260788 12.26492232 7.978723404 3 3 3 0.15 dme-miR-307a-3p 7mer-A1 GTTGTGA 3R 27933007 27933013 - 3R_27933007_27933013_- 0.820982815 0.823349562 0.822166188 0.00167358 Mes-4 FBtr0085267|FBtr0335014 27932980|27932980 27933182|27933182 3R - 27933001 27933038 3'utr Mes-4 FlyBase G55292.1 TGGAGATTGTGCTGAACAGATGGATGTTGTGAAAATAA 6 27933014 0.71400301 4 5 33 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3R:27933001-27933038 7 Mes-4 FBtr0335014|FBtr0085267 27932980|27932980 27933182|27933182 GTTGTGA 7mer-A1 dme-miR-307a-3p 3R - 27932989 27933035 3'utr Mes-4 FlyBase G41727.1 AGATTGTGCTGAACAGATGGATGTTGTGAAAATAAAGTGAGACGATT 12 27933017 0.861487842 7 10 64 0.875 0.84509804 0.375 0.25 0.4375 12 1 1 14 3R:27932989-27933035 7 6.5 3238 FBgn0039559 1839.39 48.38 74.15333333 0.00353378 0.134353038 0.087656208 1 4 2.5 0.15 dme-bantam-3p 7mer-m8 TGATCTC 3R 27942649 27942655 + 3R_27942649_27942655_+ 0.661440667 0.6615643 0.661502483 8.74E-05 CG5514 FBtr0301143 27942441 27942778 3R + 27942554 27942675 intron-3'utr CG5514 FlyBase G46349.1 TGCGTGTGACTAAAGTGCTTGTTTTTATCAGCAGACGCCCTGTCCGCCAGGCGACTCAGCAAGAAGCTCTGCCAGCAGCAGCGGTACACCAACGATGATCTCTACAAGCCCCGTCCAATCCT 155 27942649 0.945020675 10 151 617 0.97740113 1.937016107 0.192090395 0.103225806 0.214689266 155 3 1 173 3R:27942554-27942675 7 CG5514 FBtr0085252|FBtr0301143 27942441|27942441 27942778|27942778 TGATCTC 7mer-m8 dme-bantam-3p 3R + 27942622 27942724 stop_codon CG5514 FlyBase G34979.1 CTGCCAGCAGCAGCGGTACACCAACGATGATCTCTACAAGCCCCGTCCAATCCTGTCGCAGCGCTCTCGTCGCCGGGGCCTGGACTCCATTCTCTAGCCAACG 80 27942649 0.939774268 11 78 318 0.9609375 2.089905111 0.25 0.425 0.640625 80 5 0 123 3R:27942622-27942724 7 109 3239 FBgn0039560 308.5966667 10.24 15.73 0.353211851 10.64453125 6.929434202 0 0 0 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 28319903 28319908 - 3R_28319903_28319908_- 0.925678736 0.929031504 0.92735512 0.002370788 larp FBtr0306389|FBtr0306390|FBtr0306388|FBtr0301181|FBtr0301180|FBtr0089682|FBtr0089680 28318160|28318160|28318160|28318160|28318160|28318160|28318160 28320581|28320581|28320581|28320581|28320581|28320581|28320581 3R - 28319879 28319992 3'utr larp FlyBase G55332.1 CGATATAACCTATGCAAATATTACCTAACGAAAACTGAAAACCAATCAATCGAAATTGATACGCAAGCAACAACAAAAACCAAATGATCTTAATGCAAATAAATTTTGTAAATT 1150 28319908 0.979048701 16 1138 4999 0.9886121 2.239612259 0.019217082 0.175652174 0.325266904 1150 9 7 1389 3R:28319879-28319992 6 larp FBtr0301181|FBtr0301180|FBtr0089682|FBtr0089680|FBtr0306389|FBtr0306390|FBtr0306388 28318160|28318160|28318160|28318160|28318160|28318160|28318160 28320581|28320581|28320581|28320581|28320581|28320581|28320581 TGATCT 6mer3-8 dme-bantam-3p 3R - 28319880 28319953 3'utr larp FlyBase G41762.1 AACCAATCAATCGAAATTGATACGCAAGCAACAACAAAAACCAAATGATCTTAATGCAAATAAATTTTGTAAAT 815 28319908 0.977454823 10 801 3509 0.984100418 2.769377326 0.011715481 0.319018405 0.535564854 815 18 1 1176 3R:28319880-28319953 6 967 3240 FBgn0261618 9245.076667 138.0666667 210.28 0.104596212 7.003862868 4.598630398 0 0 0 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 28320184 28320189 - 3R_28320184_28320189_- 0.776941251 0.836216242 0.806578747 0.041913684 larp FBtr0306389|FBtr0306390|FBtr0306388|FBtr0301181|FBtr0301180|FBtr0089682|FBtr0089680 28318160|28318160|28318160|28318160|28318160|28318160|28318160 28320581|28320581|28320581|28320581|28320581|28320581|28320581 3R - 28320147 28320256 3'utr larp FlyBase G55333.2 CACACACACACACATACCAATTACACACAGCGGGGTCTGTCTGCTTTGTACCAGTGCCAACCAGCCATGATCTTGGAAAATAACGAAACGATTGCCCTTATTTTTTTTTT 299 28320189 0.95636886 18 293 1595 0.980662983 2.073107098 0.154696133 0.16722408 0.312154696 299 5 2 355 3R:28320147-28320256 6 larp FBtr0301181|FBtr0301180|FBtr0089682|FBtr0089680|FBtr0306389|FBtr0306390|FBtr0306388 28318160|28318160|28318160|28318160|28318160|28318160|28318160 28320581|28320581|28320581|28320581|28320581|28320581|28320581 TGATCT 6mer3-8 dme-bantam-3p 3R - 28320018 28320354 3'utr larp FlyBase G41763.1 GGTTTAGTAGTTACGATTCCAAATGTTTGTTTCTCGCATACCCTCGACAAAAAACTAAAACAATGGTTGCTTACAAAATGCTCAATGCTCACACAAAACACACACACACACATACCAATTACACACAGCGGGGTCTGTCTGCTTTGTACCAGTGCCAACCAGCCATGATCTTGGAAAATAACGAAACGATTGCCCTTATTTTTTTTTTTTGTTCTGTTAATTATTCTCCTTATTTTTTATGCGATGCAAAAATCAAGGCAAAGATTTTCCTACTTAGAGCAGCGTTAATAGTTGACGTAATGCCATGAACTGTTGTACTATACGATTAAAGTTAAAG 303 28320189 0.972030035 39 300 1773 0.991208791 2.353146546 0.178021978 0.382838284 0.589010989 303 3 1 451 3R:28320018-28320354 6 159.5 3241 FBgn0261618 9245.076667 138.0666667 210.28 0.017252426 1.155239015 0.75851246 0 0 0 0.15 dme-miR-986-5p 7mer-m8 ATTCGAG 3R 28320445 28320451 - 3R_28320445_28320451_- 0.603307987 0.596350611 0.599829299 0.004919625 larp FBtr0306389|FBtr0306390|FBtr0306388|FBtr0301181|FBtr0301180|FBtr0089682|FBtr0089680 28318160|28318160|28318160|28318160|28318160|28318160|28318160 28320581|28320581|28320581|28320581|28320581|28320581|28320581 3R - 28320405 28320648 stop_codon larp FlyBase G55334.2 AGCAACATCAACAGCAGCGACGCCAGCGGTAACGGTATCTTCGGGGTCATCGTCGTCGAAGAAGTAGTTACACGATAATGCAGAGACACTTTTTGGATTAGGCTTAAGTTAATATCTACCGCTTAGTTTTCAGGGGGCACTCGCATTTGATGGCTCCACACTCTTTTGTTTATTCATTCTTATTATTCTTTTGTAGTATTCGAGTCAAACGTAAAGTGGGAAGAGTTGTTAGCGTTTAGCATAA 283 28320450 0.935001739 39 273 1947 0.974504249 1.837588438 0.141643059 0.183745583 0.345609065 283 5 4 344 3R:28320405-28320648 7 larp FBtr0301181|FBtr0301180|FBtr0089682|FBtr0089680|FBtr0306389|FBtr0306390|FBtr0306388 28318160|28318160|28318160|28318160|28318160|28318160|28318160 28320581|28320581|28320581|28320581|28320581|28320581|28320581 ATTCGAG 7mer-m8 dme-miR-986-5p 3R - 28320390 28320481 3'utr larp FlyBase G41764.1 GTTTATTCATTCTTATTATTCTTTTGTAGTATTCGAGTCAAACGTAAAGTGGGAAGAGTTGTTAGCGTTTAGCATAATTAAGTGAAATTTTT 152 28320450 0.933300818 12 148 1019 0.960869565 2.344392274 0.07826087 0.361842105 0.57826087 152 9 0 221 3R:28320390-28320481 7 160.5 3242 FBgn0261618 9245.076667 138.0666667 210.28 0.017360592 1.162481893 0.763268024 -1 -1 -1 0.15 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 28520748 28520753 - 3R_28520748_28520753_- 0.939811851 0.782431238 0.861121545 0.11128496 Ppn FBtr0301837|FBtr0300337|FBtr0301839|FBtr0301838 28520663|28520663|28520663|28520663 28521128|28521128|28521128|28521128 3R - 28520719 28520792 3'utr Ppn FlyBase G55382.1 CGAATTTGCCTTCTACTTTTTAGTTTCTACGACATTTCTGTGCAACGAGTAAAGCATTTAAGCCTAAAAACCAA 12 28520756 0.987747557 7 11 94 0.928571429 1.113943352 0.142857143 0.083333333 0.214285714 12 1 0 13 3R:28520719-28520792 6 Ppn FBtr0301839|FBtr0301838|FBtr0301837|FBtr0300337 28520663|28520663|28520663|28520663 28521128|28521128|28521128|28521128 GTGCAA 6mer3-8 dme-miR-92b-3p 3R - 28520703 28520766 3'utr Ppn FlyBase G41807.1 CTACGACATTTCTGTGCAACGAGTAAAGCATTTAAGCCTAAAAACCAATAATTGTAAATAAATT 6 28520757 0.955176864 5 6 31 1 1 0.4 0.5 0.7 6 0 0 10 3R:28520703-28520766 6 5.5 3243 FBgn0003137 888.9833333 12.49 19.08666667 0.006186843 0.440352282 0.288159273 3 4 3.5 0.15 dme-miR-276a-3p 7mer-A1 GTTCCTA 3R 28520850 28520856 - 3R_28520850_28520856_- 0.518172794 0.573292357 0.545732575 0.038975443 Ppn FBtr0301837|FBtr0300337|FBtr0301839|FBtr0301838 28520663|28520663|28520663|28520663 28521128|28521128|28521128|28521128 3R - 28520835 28520912 3'utr Ppn FlyBase G55383.1 AGTATTTTACTCTCTTCCAGGACAAAAGCAAATAGTATTAGTGATTTTATGTTTGTGTTCCTATTTATTCTTGATAAC 13 28520859 0.91937244 10 12 151 0.9375 1.176091259 0.3125 0.230769231 0.375 13 1 0 15 3R:28520835-28520912 7 Ppn FBtr0301839|FBtr0301838|FBtr0301837|FBtr0300337 28520663|28520663|28520663|28520663 28521128|28521128|28521128|28521128 GTTCCTA 7mer-A1 dme-miR-276a-3p 3R - 28520823 28520889 3'utr Ppn FlyBase G41808.1 AAAAGCAAATAGTATTAGTGATTTTATGTTTGTGTTCCTATTTATTCTTGATAACGAGTAACCTTAA 9 28520859 0.990984146 7 8 83 0.909090909 1 0.090909091 0.111111111 0.272727273 9 1 0 10 3R:28520823-28520889 7 6 3244 FBgn0003137 888.9833333 12.49 19.08666667 0.006749283 0.480384307 0.314355571 3 3 3 0.15 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3R 28609026 28609032 - 3R_28609026_28609032_- 0.808809289 0.618532264 0.713670776 0.134546157 CG10011 FBtr0085319|FBtr0085319 28607937|28607937 28609394|28609394 3R - 28608991 28609046 3'utr CG10011 FlyBase G55401.1 ACGACACGAATGTATACTTAAGAGAGCTCAGACTCAGCACTGTTCTCAGAATTAAT 12 28609035 0.901715016 6 10 66 0.833333333 0.698970004 0.083333333 0 0 12 1 1 10 3R:28608991-28609046 7 CG10011 FBtr0085319|FBtr0085319 28607937|28607937 28609394|28609394 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3R - 28608994 28609046 3'utr CG10011 FlyBase G41817.1 ACGACACGAATGTATACTTAAGAGAGCTCAGACTCAGCACTGTTCTCAGAATT 5 28609028 0.978696285 4 5 24 1 0.954242509 0.222222222 0.8 0.888888889 5 0 0 9 3R:28608994-28609046 7 6.5 3245 FBgn0039590 962.0733333 13.5 20.90333333 0.006756242 0.481481481 0.310955191 3 -4 -0.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 28609248 28609254 - 3R_28609248_28609254_- 0.801938352 0.801964966 0.801951659 1.88E-05 CG10011 FBtr0085319|FBtr0085319|FBtr0085319 28607937|28607937|28607937 28609394|28609394|28609394 3R - 28609241 28609283 3'utr CG10011 FlyBase G55402.1 TTAGTACTTTTCAGAAAGTATTTGTTTTTTGTGATAGTTTCAA 13 28609255 0.707454133 3 11 173 0.947368421 1.255272505 0.210526316 0.307692308 0.526315789 13 1 0 18 3R:28609241-28609283 7 CG10011 FBtr0085319|FBtr0085319|FBtr0085319 28607937|28607937|28607937 28609394|28609394|28609394 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 28609241 28609270 3'utr CG10011 FlyBase G41818.1 GAAAGTATTTGTTTTTTGTGATAGTTTCAA 5 28609255 0.666793151 3 5 64 1 0.84509804 0.571428571 0.4 0.571428571 5 0 0 7 3R:28609241-28609270 7 8.5 3246 FBgn0039590 962.0733333 13.5 20.90333333 0.008835085 0.62962963 0.406633711 1 1 1 0.15 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 28695565 28695572 + 3R_28695565_28695572_+ 0.385560641 0.385560634 0.385560637 0 CG9990 FBtr0085309|FBtr0305087|FBtr0336787|FBtr0303343|FBtr0305088|FBtr0085308 28695157|28695157|28695157|28695157|28695157|28695157 28695939|28695939|28695939|28695939|28695939|28695939 3R + 28695543 28695578 3'utr CG9990 FlyBase G46413.1 AATTTTATATATTTTCAATGGACTGTGATTGTTTTT 15 28695561 0.736746895 5 14 159 0.95 1.278753601 0.05 0.266666667 0.45 15 1 0 19 3R:28695543-28695578 8 CG9990 FBtr0305088|FBtr0085308|FBtr0336787|FBtr0303343|FBtr0085309|FBtr0305087 28695157|28695157|28695157|28695157|28695157|28695157 28695939|28695939|28695939|28695939|28695939|28695939 CTGTGATT 8mer-m1 dme-miR-308-3p 3R + 28695548 28695583 3'utr CG9990 FlyBase G35026.1 TATATATTTTCAATGGACTGTGATTGTTTTTTCTAC 13 28695560 0.745503027 6 13 126 1 1.230448921 0.352941176 0.230769231 0.411764706 13 0 0 17 3R:28695548-28695583 8 14 3247 FBgn0039594 1 0.036666667 0.056666667 14 381.8181818 247.0588235 4 5 4.5 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 28815848 28815853 + 3R_28815848_28815853_+ 0.97299305 0.853408356 0.913200703 0.084559152 CG1646 FBtr0113301 28814209 28817354 3R + 28815823 28815896 3'utr CG1646 FlyBase G46435.1 AGCCGGCAATGCAGATCGATTTCAGTGATCTTAGCACTCTGAATGACGAAGAGGTGGTCAGCATTAGGGACAGG 21 28815848 0.980065139 5 21 145 1 1.477121255 0.2 0.333333333 0.533333333 21 0 0 30 3R:28815823-28815896 6 CG1646 FBtr0113301 28814209 28817354 TGATCT 6mer3-8 dme-bantam-3p 3R + 28815832 28815874 3'utr CG1646 FlyBase G35040.1 TGCAGATCGATTTCAGTGATCTTAGCACTCTGAATGACGAAGA 16 28815848 0.807008032 2 15 123 1 1.447158031 0.214285714 0.4375 0.678571429 16 0 0 28 3R:28815832-28815874 6 15 3248 FBgn0039600 1138.88 36.74333333 56.61666667 0.013170835 0.408237322 0.264939653 0 0 0 0.15 dme-bantam-3p 7mer-m8 TGATCTC 3R 28816496 28816502 + 3R_28816496_28816502_+ 0.660874122 0.660602279 0.6607382 0.000192192 CG1646 FBtr0113301 28814209 28817354 3R + 28816478 28816524 3'utr CG1646 FlyBase G46438.1 CCTCAATAAAATCTGTCATGATCTCGACGCCGGCTTGGCCGCCCTGC 71 28816496 0.711954305 7 63 410 0.880952381 1.86923172 0.392857143 0.169014085 0.297619048 71 10 0 74 3R:28816478-28816524 7 CG1646 FBtr0113301 28814209 28817354 TGATCTC 7mer-m8 dme-bantam-3p 3R + 28816472 28816551 3'utr CG1646 FlyBase G35043.1 CCGTTTCCTCAATAAAATCTGTCATGATCTCGACGCCGGCTTGGCCGCCCTGCAGCAGGCGCTGGAACGTGATCCAGCCA 46 28816496 0.987401779 9 45 254 0.985294118 1.826074803 0.323529412 0.282608696 0.514705882 46 1 0 67 3R:28816472-28816551 7 55 3249 FBgn0039600 1138.88 36.74333333 56.61666667 0.04829306 1.496870181 0.971445393 0 0 0 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3R 28816868 28816873 + 3R_28816868_28816873_+ 0.999913374 0.999494407 0.999703891 0.000296278 CG1646 FBtr0113301 28814209 28817354 3R + 28816855 28816892 3'utr CG1646 FlyBase G46439.1 AGTGATGGCAGTCCTAGTCGCAAAAACTCATCAAGCAG 6 28816865 0.923141336 4 6 18 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3R:28816855-28816892 6 CG1646 FBtr0113301 28814209 28817354 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3R + 28816855 28816884 3'utr CG1646 FlyBase G35044.1 AGTGATGGCAGTCCTAGTCGCAAAAACTCA 6 28816867 0.912319201 3 6 23 1 0.903089987 0 0.333333333 0.5 6 0 0 8 3R:28816855-28816884 6 5.5 3250 FBgn0039600 1138.88 36.74333333 56.61666667 0.004829306 0.149687018 0.097144539 3 1 2 0.15 dme-miR-33-5p 7mer-A1 AATGCAA 3R 28824625 28824631 - 3R_28824625_28824631_- 0.782654381 0.781723536 0.782188959 0.000658246 WASp FBtr0085354|FBtr0085352|FBtr0085353|FBtr0336768 28824504|28824504|28824504|28824504 28825449|28825449|28825449|28825449 3R - 28824606 28824665 3'utr WASp FlyBase G55426.1 CGCATAAGTATTTTCTTTTAGTTCGAGCGCATTTAATGCAAACTTGTAGTCATTTTTCTT 17 28824633 0.819089351 5 15 150 0.944444444 1.230448921 0.166666667 0.058823529 0.111111111 17 1 0 17 3R:28824606-28824665 7 WASp FBtr0085354|FBtr0085352|FBtr0085353|FBtr0336768 28824504|28824504|28824504|28824504 28825449|28825449|28825449|28825449 AATGCAA 7mer-A1 dme-miR-33-5p 3R - 28824593 28824650 3'utr WASp FlyBase G41841.1 TTTTAGTTCGAGCGCATTTAATGCAAACTTGTAGTCATTTTTCTTCTGTGTGTTTGTA 14 28824633 0.982650081 4 13 104 0.952380952 1.301029996 0.285714286 0.285714286 0.523809524 14 1 0 20 3R:28824593-28824650 7 13.5 3251 FBgn0024273 698.2566667 30.35666667 46.61666667 0.019333865 0.444712858 0.289595996 2 2 2 0.15 dme-miR-932-5p 7mer-m8 GGAATTG 3R 28869896 28869902 + 3R_28869896_28869902_+ 0.62946982 0.69179435 0.660632085 0.044070077 spg FBtr0330304|FBtr0336766 28869617|28869062 28870439|28870439 3R + 28869873 28869981 3'utr spg FlyBase G46480.1 ATTTTATATATAATTTTTCACGGGGAATTGTCGCTAAAGTTACTAAGAAGAATGTTTAGATAAGAAAATAAAGATGAAATGATTTTTATATTGAAAGAGGATATCAAAT 31 28869901 0.918329685 11 27 239 0.882352941 1.477121255 0.058823529 0.096774194 0.176470588 31 4 0 30 3R:28869873-28869981 7 spg FBtr0336766|FBtr0330304 28869062|28869617 28870439|28870439 GGAATTG 7mer-m8 dme-miR-932-5p 3R + 28869873 28869959 3'utr spg FlyBase G35071.1 ATTTTATATATAATTTTTCACGGGGAATTGTCGCTAAAGTTACTAAGAAGAATGTTTAGATAAGAAAATAAAGATGAAATGATTTTT 17 28869900 0.984116813 7 15 123 0.892857143 1.397940009 0.035714286 0.352941176 0.607142857 17 3 0 25 3R:28869873-28869959 7 15 3252 FBgn0264324 552.3333333 8.306666667 12.79 0.027157514 1.805778491 1.172791243 -5 -4 -4.5 0.15 dme-miR-33-5p 7mer-m8 CAATGCA 3R 28870069 28870075 + 3R_28870069_28870075_+ 0.637297591 0.557923966 0.597610779 0.056125611 spg FBtr0330304|FBtr0336766 28869617|28869062 28870439|28870439 3R + 28869996 28870099 3'utr spg FlyBase G46481.1 TCAGAACGCTAATCAAAAACGATCAACGCAAAATATATACACTGAAAACAAAGCAGGACACCGACAAAATGTGCAATGCAGTTTTTACTTTAACGAATATAGCC 22 28870067 0.950259749 7 19 90 0.875 1.021189299 0.125 0.090909091 0.166666667 22 2 1 21 3R:28869996-28870099 7 spg FBtr0336766|FBtr0330304 28869062|28869617 28870439|28870439 CAATGCA 7mer-m8 dme-miR-33-5p 3R + 28870046 28870081 3'utr spg FlyBase G35072.1 AAGCAGGACACCGACAAAATGTGCAATGCAGTTTTT 9 28870066 0.906629325 4 8 26 0.846153846 1.041392685 0.538461538 0.333333333 0.538461538 9 2 0 11 3R:28870046-28870081 7 11.5 3253 FBgn0264324 552.3333333 8.306666667 12.79 0.02082076 1.384430177 0.899139953 2 3 2.5 0.15 dme-miR-79-3p 6mer3-8 TAGCTT 3R 28870177 28870182 + 3R_28870177_28870182_+ 0.734947186 0.841278341 0.788112764 0.075187442 spg FBtr0330304|FBtr0336766 28869617|28869062 28870439|28870439 3R + 28870143 28870194 3'utr spg FlyBase G46482.1 ATGCGAACGGCAATTAGGAATTTTAAAGTGCTACTAGCTTCATAACGAATCA 16 28870164 0.975066441 9 15 111 0.952380952 1 0.095238095 0.25 0.428571429 16 0 1 20 3R:28870143-28870194 6 spg FBtr0336766|FBtr0330304 28869062|28869617 28870439|28870439 TAGCTT 6mer3-8 dme-miR-79-3p 3R + 28870156 28870190 3'utr spg FlyBase G35073.1 TTAGGAATTTTAAAGTGCTACTAGCTTCATAACGA 5 28870165 0.767774407 4 4 39 0.857142857 0.77815125 0.142857143 0.4 0.571428571 5 1 0 6 3R:28870156-28870190 6 9 3254 FBgn0264324 552.3333333 8.306666667 12.79 0.016294508 1.083467095 0.703674746 13 12 12.5 0.15 dme-miR-31a-5p 6mer3-8 TCTTGC 3R 28921833 28921838 + 3R_28921833_28921838_+ 0.985908577 0.980921884 0.98341523 0.003526129 Doa FBtr0299742|FBtr0299749|FBtr0299748|FBtr0308600|FBtr0308599|FBtr0336461|FBtr0299747|FBtr0299744|FBtr0299753|FBtr0299743|FBtr0299752|FBtr0299751|FBtr0299745|FBtr0308598|FBtr0299750 28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741 28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28921965|28922772|28921965|28922772|28921965 3R + 28921794 28921840 3'utr Doa FlyBase G46524.1 CTCATGCAAACATACACTCAAGGCAGTCGTCCAGCAACGTCTTGCAC 8 28921834 0.935135252 3 7 29 0.888888889 0.903089987 0 0.125 0.222222222 8 1 0 8 3R:28921794-28921840 6 Doa FBtr0308598|FBtr0299751|FBtr0299750|FBtr0299752|FBtr0299745|FBtr0299749|FBtr0299747|FBtr0308599|FBtr0299753|FBtr0299744|FBtr0299742|FBtr0299748|FBtr0299743|FBtr0308600|FBtr0336461 28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741 28922772|28922772|28921965|28921965|28921965|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772 TCTTGC 6mer3-8 dme-miR-31a-5p 3R + 28921809 28921858 3'utr Doa FlyBase G35107.1 ACTCAAGGCAGTCGTCCAGCAACGTCTTGCACCCGACTCGTAGAGTAGAC 5 28921835 0.938897014 4 4 17 1 0.954242509 0 0.6 0.777777778 5 0 0 9 3R:28921809-28921858 6 4.5 3255 FBgn0265998 2384.633333 84.60666667 129.7833333 0.001887083 0.053187298 0.034673173 -1 -2 -1.5 0.15 dme-miR-1003-3p 6mer2-7 TGTGAG 3R 28922644 28922649 + 3R_28922644_28922649_+ 0.985243849 0.853256693 0.919250271 0.093328973 Doa FBtr0299742|FBtr0299749|FBtr0299748|FBtr0308600|FBtr0308599|FBtr0336461|FBtr0299747|FBtr0299744|FBtr0299753|FBtr0299743|FBtr0299751|FBtr0308598 28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741 28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772 3R + 28922610 28922673 3'utr Doa FlyBase G46530.1 TTGAATATACTTATACATACTTAATTCAAATGATTGTGAGTTAGTTTAATATTACATAAATATT 210 28922650 0.793700763 12 207 2066 0.988142292 1.920818754 0.098814229 0.185714286 0.324110672 210 1 2 250 3R:28922610-28922673 6 Doa FBtr0308598|FBtr0299751|FBtr0299749|FBtr0299747|FBtr0308599|FBtr0299753|FBtr0299744|FBtr0299742|FBtr0299748|FBtr0299743|FBtr0308600|FBtr0336461 28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741 28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772 TGTGAG 6mer2-7 dme-miR-1003-3p 3R + 28922608 28922674 3'utr Doa FlyBase G35111.1 AATTGAATATACTTATACATACTTAATTCAAATGATTGTGAGTTAGTTTAATATTACATAAATATTA 149 28922650 0.989349201 6 147 1418 0.981651376 1.728353782 0.077981651 0.342281879 0.550458716 149 1 3 214 3R:28922608-28922674 6 178 3256 FBgn0265998 2384.633333 84.60666667 129.7833333 0.074644599 2.103853124 1.37151663 -6 -6 -6 0.15 dme-miR-305-5p 8mer-m1 AGTACAAT 3R 29032740 29032747 - 3R_29032740_29032747_- 0.441490545 0.404613886 0.423052216 0.026075694 beta4GalNAcTB FBtr0085419 29032658 29032947 3R - 29032727 29032844 3'utr beta4GalNAcTB FlyBase G55485.1 GTTACCGCCTTAGACAATGCGTTCCGAATCGATCGTGATATCTCACTCACTAGGCTAAGAAGCTAGACGGGAATGGAGGAGTCAAAGCTGTAATTGAAGTACAATGCAGAAGCCTCAG 27 29032750 0.960193051 10 26 143 0.971428571 1.230448921 0.257142857 0.222222222 0.4 27 0 1 34 3R:29032727-29032844 8 beta4GalNAcTB FBtr0085419 29032658 29032947 AGTACAAT 8mer-m1 dme-miR-305-5p 3R - 29032714 29032772 3'utr beta4GalNAcTB FlyBase G41872.1 ATGGAGGAGTCAAAGCTGTAATTGAAGTACAATGCAGAAGCCTCAGATTAAGCGGATAT 13 29032750 0.96166694 4 12 63 0.913043478 1.322219295 0.130434783 0.461538462 0.695652174 13 2 0 21 3R:29032714-29032772 8 14.5 3257 FBgn0039625 119.31 10.86333333 16.56333333 0.121532143 1.334765265 0.875427651 3 3 3 0.15 dme-miR-318-3p 7mer-m8 CCCAGTG 3R 29046697 29046703 + 3R_29046697_29046703_+ 0.521202598 0.485506935 0.503354766 0.025240672 Pkc98E FBtr0085359|FBtr0339149|FBtr0339150|FBtr0301516 29046223|29046223|29046223|29046223 29049148|29047034|29047034|29047034 3R + 29046657 29046718 3'utr Pkc98E FlyBase G46554.1 AAGAAAGAAGGAAGAGATACCCCCACCCATCTAGTCAATGCCCAGTGGCTGAGTGCATTTTG 85 29046686 0.958026863 8 78 359 0.928571429 1.959041392 0.224489796 0.141176471 0.255102041 85 7 0 91 3R:29046657-29046718 7 Pkc98E FBtr0339150|FBtr0301516|FBtr0085359|FBtr0339149 29046223|29046223|29046223|29046223 29047034|29047034|29049148|29047034 CCCAGTG 7mer-m8 dme-miR-318-3p 3R + 29046660 29046729 3'utr Pkc98E FlyBase G35122.1 AAAGAAGGAAGAGATACCCCCACCCATCTAGTCAATGCCCAGTGGCTGAGTGCATTTTGTTATTAGTTAT 61 29046686 0.929056765 9 55 287 0.925531915 1.638489257 0.329787234 0.393442623 0.606382979 61 6 1 87 3R:29046660-29046729 7 58 3258 FBgn0003093 985.62 22.17 34.02333333 0.058846208 2.616147948 1.704712452 11 11 11 0.15 dme-miR-8-3p 7mer-A1 AGTATTA 3R 29046965 29046971 + 3R_29046965_29046971_+ 0.809174545 0.823349475 0.81626201 0.010023239 Pkc98E FBtr0085359|FBtr0339149|FBtr0339150|FBtr0301516 29046223|29046223|29046223|29046223 29049148|29047034|29047034|29047034 3R + 29046945 29046992 3'utr Pkc98E FlyBase G46555.1 CTTGCACAACTTCCTTCTCAAGTATTAAAGCGATATTATTTTAAAGTT 12 29046961 0.908393151 7 8 103 0.769230769 0.698970004 0.307692308 0.083333333 0.153846154 12 2 1 10 3R:29046945-29046992 7 Pkc98E FBtr0339150|FBtr0301516|FBtr0085359|FBtr0339149 29046223|29046223|29046223|29046223 29047034|29047034|29049148|29047034 AGTATTA 7mer-A1 dme-miR-8-3p 3R + 29046894 29047002 3'utr Pkc98E FlyBase G35123.1 AATACATGCGACCACACGGATCTAGTTTCATTTGTTTTACATATTCGAAATCTTGCACAACTTCCTTCTCAAGTATTAAAGCGATATTATTTTAAAGTTACCTTATTGT 15 29046961 0.992828398 11 13 141 0.826086957 1.278753601 0.086956522 0.4 0.608695652 15 4 0 19 3R:29046894-29047002 7 8 3259 FBgn0003093 985.62 22.17 34.02333333 0.008116718 0.360847993 0.235132752 4 4 4 0.15 dme-miR-305-5p 7mer-m1 GTACAAT 3R 29050677 29050683 + 3R_29050677_29050683_+ 0.765586661 0.765586663 0.765586662 0 CG11837 FBtr0085360 29050645 29050721 3R + 29050662 29050693 3'utr CG11837 FlyBase G46562.1 AGATCGTTAAACTTTGTACAATTTACCAACAT 8 29050675 0.626237893 4 8 70 1 0.903089987 0 0 0 8 0 0 8 3R:29050662-29050693 7 CG11837 FBtr0085360 29050645 29050721 GTACAAT 7mer-m1 dme-miR-305-5p 3R + 29050657 29050694 3'utr CG11837 FlyBase G35126.1 TCTATAGATCGTTAAACTTTGTACAATTTACCAACATT 9 29050683 0.596077959 4 9 72 1 1.113943352 0 0.333333333 0.538461538 9 0 0 13 3R:29050657-29050694 7 8 3260 FBgn0039627 323 36.6 56.57333333 0.024767802 0.218579235 0.14140938 2 -6 -2 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 29058766 29058771 + 3R_29058766_29058771_+ 0.98616591 0.997252029 0.991708969 0.007839056 Sirt7 FBtr0085364 29058678 29059204 3R + 29058723 29058791 3'utr Sirt7 FlyBase G46565.1 GGTGAAATGATTACCCTTGAGTCAATGGCTTTTTGGAAACGTTTGATCTTATACTTGATATGAAGGAGC 22 29058774 0.854690217 10 22 177 1 1.431363764 0.296296296 0.181818182 0.333333333 22 0 0 27 3R:29058723-29058791 6 Sirt7 FBtr0085364 29058678 29059204 TGATCT 6mer3-8 dme-bantam-3p 3R + 29058690 29058779 3'utr Sirt7 FlyBase G35128.1 ATGTACGGCCGTGATTCCTCCCTAAGATAAGAAGGTGAAATGATTACCCTTGAGTCAATGGCTTTTTGGAAACGTTTGATCTTATACTTG 23 29058765 0.987055649 12 21 181 0.90625 1.462397998 0.125 0.347826087 0.53125 23 3 0 29 3R:29058690-29058779 6 14 3261 FBgn0039631 118 4.676666667 7.163333333 0.118644068 2.993585175 1.954397394 -8 1 -3.5 0.15 dme-miR-8-3p 6mer2-7 AGTATT 3R 29058855 29058860 + 3R_29058855_29058860_+ 0.956807285 0.867786166 0.912296726 0.062947423 Sirt7 FBtr0085364 29058678 29059204 3R + 29058820 29058873 3'utr Sirt7 FlyBase G46566.1 GACCTGCCCTCACCGAGACATATGCTCGCTTCAATAGTATTTTAGCTATAGGTT 8 29058861 0.990437832 4 7 71 0.888888889 0.602059991 0.111111111 0.125 0.222222222 8 0 1 8 3R:29058820-29058873 6 Sirt7 FBtr0085364 29058678 29059204 AGTATT 6mer2-7 dme-miR-8-3p 3R + 29058796 29058874 3'utr Sirt7 FlyBase G35129.1 TGTTTCTTTTCTACGGAAAAGATCGACCTGCCCTCACCGAGACATATGCTCGCTTCAATAGTATTTTAGCTATAGGTTT 10 29058861 0.987003804 5 10 84 1 1.230448921 0 0.4 0.647058824 10 0 0 17 3R:29058796-29058874 6 5.5 3262 FBgn0039631 118 4.676666667 7.163333333 0.046610169 1.176051319 0.767798976 -6 -6 -6 0.15 dme-miR-980-3p 6mer3-8 GGCAGC 3R 29059718 29059723 - 3R_29059718_29059723_- 0.999909385 0.999985418 0.999947401 5.37E-05 Cul5 FBtr0085417 29059270 29059952 3R - 29059680 29059744 3'utr Cul5 FlyBase G55498.1 TAAAAGACCCACACTCCAATCGGCAGCCATTTTCTCGTGTCCACGTCCTGTATTTGTGAAACTTT 43 29059725 0.931828011 7 42 222 0.980769231 1.707570176 0.096153846 0.186046512 0.326923077 43 1 0 51 3R:29059680-29059744 6 Cul5 FBtr0085417 29059270 29059952 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 29059710 29059744 3'utr Cul5 FlyBase G41879.2 TAAAAGACCCACACTCCAATCGGCAGCCATTTTCT 15 29059725 0.966945703 3 13 62 0.952380952 1.301029996 0.047619048 0.266666667 0.476190476 15 1 0 20 3R:29059710-29059744 6 27 3263 FBgn0039632 438.4633333 15.78333333 23.95 0.061578695 1.710665259 1.127348643 2 2 2 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 29108426 29108431 + 3R_29108426_29108431_+ 0.964876444 0.999800638 0.982338541 0.024695139 CG11873 FBtr0330299|FBtr0330301|FBtr0330300 29106782|29106701|29106701 29108948|29108948|29108948 3R + 29108410 29108443 3'utr CG11873 FlyBase G46588.1 TCCCGTGTGAGTTGCATGATCTTGTATTTCTATT 12 29108426 0.831970843 2 11 108 1 1.146128036 0 0.181818182 0.357142857 11 0 0 14 3R:29108410-29108443 6 CG11873 FBtr0330300|FBtr0330301|FBtr0330299 29106701|29106701|29106782 29108948|29108948|29108948 TGATCT 6mer3-8 dme-bantam-3p 3R + 29108395 29108437 3'utr CG11873 FlyBase G35142.1 CCCACCTGCCTAGCGTCCCGTGTGAGTTGCATGATCTTGTATT 9 29108426 0.98706224 3 9 71 1 1.176091259 0.066666667 0.444444444 0.666666667 9 0 0 15 3R:29108395-29108437 6 9.5 3264 FBgn0039633 879.82 9.466666667 14.51 0.010797663 1.003521127 0.654720882 0 0 0 0.15 dme-miR-184-5p 6mer3-8 TGATAA 3R 29109378 29109383 - 3R_29109378_29109383_- 0.999988204 0.99990435 0.999946277 5.93E-05 alpha-Man-Ib FBtr0085416 29109051 29109880 3R - 29109362 29109407 3'utr alpha-Man-Ib FlyBase G55513.1 TCGATTGTATAATATTCTGTGTACTGATAATTGTTATTTTGTAATT 24 29109390 0.643471361 6 23 257 1 1.397940009 0.08 0.041666667 0.08 24 0 0 25 3R:29109362-29109407 6 alpha-Man-Ib FBtr0085416 29109051 29109880 TGATAA 6mer3-8 dme-miR-184-5p 3R - 29109367 29109399 3'utr alpha-Man-Ib FlyBase G41889.1 ATAATATTCTGTGTACTGATAATTGTTATTTTG 13 29109387 0.695193212 6 11 155 0.863636364 1.278753601 0 0.461538462 0.681818182 13 3 0 19 3R:29109367-29109399 6 18 3265 FBgn0039634 927.67 35.07666667 53.86333333 0.019403452 0.513161646 0.334179095 7 4 5.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 29118536 29118541 - 3R_29118536_29118541_- 0.777022368 0.999971182 0.888496775 0.157648608 yem FBtr0085415|FBtr0330292 29118328|29118328 29118881|29118584 3R - 29118496 29118561 3'utr yem FlyBase G55527.1 TTGCGATTCTAATCTAAGATTCTAGTGCTGATTCTAGGTAGGTTTCATTCGCAGCTGTGTCTGCCG 6 29118533 0.992335863 5 5 59 1 0.903089987 0 0.333333333 0.5 6 0 0 8 3R:29118496-29118561 6 yem FBtr0085415|FBtr0330292 29118328|29118328 29118881|29118584 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R - 29118502 29118557 3'utr yem FlyBase G41897.1 GATTCTAATCTAAGATTCTAGTGCTGATTCTAGGTAGGTTTCATTCGCAGCTGTGT 10 29118541 0.990213146 6 10 91 1 1.113943352 0.153846154 0.3 0.461538462 10 0 0 13 3R:29118502-29118557 6 6.5 3266 FBgn0005596 782.6666667 22.29666667 34.15 0.00830494 0.291523397 0.19033675 -8 0 -4 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 29145582 29145589 + 3R_29145582_29145589_+ 0.610915131 0.619715656 0.615315393 0.006222964 CG14516 FBtr0085383|FBtr0085382|FBtr0335406 29145497|29145497|29145497 29145787|29145787|29145787 3R + 29145540 29145594 3'utr CG14516 FlyBase G46650.1 TATTAGATTTCGCAGCTGCAACTGCATGGGTTGGGCCACCAATGCATTTATGTGT 14 29145582 0.76462622 7 13 99 0.941176471 0.903089987 0.352941176 0.214285714 0.352941176 14 0 1 16 3R:29145540-29145594 8 CG14516 FBtr0335406|FBtr0085382|FBtr0085383 29145497|29145497|29145497 29145787|29145787|29145787 TGCATTTA 8mer-A1 dme-miR-277-3p 3R + 29145567 29145601 3'utr CG14516 FlyBase G35187.1 GGGTTGGGCCACCAATGCATTTATGTGTAATATTT 6 29145587 0.736312023 4 6 42 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3R:29145567-29145601 8 8.5 3267 FBgn0039640 168.03 5.77 8.72 0.050586205 1.473136915 0.974770642 0 -5 -2.5 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 29145737 29145744 + 3R_29145737_29145744_+ 0.500120318 0.500033101 0.500076709 6.17E-05 CG14516 FBtr0085383|FBtr0085382|FBtr0335406 29145497|29145497|29145497 29145787|29145787|29145787 3R + 29145634 29145791 3'utr CG14516 FlyBase G46651.2 AAGAGAGAAAGCCCTTGGCAGATCGTCCAGAGCATCACGTTTTTCATTACTTTTAATGTATGCCTTCTTTTCATAACAATTATGAGTCTTGTAATTTTAATTTGTACTTAAATGTAATTGTAAATGTAAATGGAATTATAACATTGTTCGTCACAAAA 53 29145716 0.990092391 22 51 496 0.967213115 1.770852012 0.245901639 0.132075472 0.245901639 53 2 0 59 3R:29145634-29145791 8 CG14516 FBtr0335406|FBtr0085382|FBtr0085383 29145497|29145497|29145497 29145787|29145787|29145787 GTACTTAA 8mer-A1 dme-miR-252-5p 3R + 29145704 29145760 3'utr CG14516 FlyBase G35188.1 TCATAACAATTATGAGTCTTGTAATTTTAATTTGTACTTAAATGTAATTGTAAATGT 11 29145716 0.790802347 5 10 117 0.928571429 1.113943352 0.142857143 0.272727273 0.428571429 11 1 0 13 3R:29145704-29145760 8 13.5 3268 FBgn0039640 168.03 5.77 8.72 0.080342796 2.339688042 1.548165138 21 21 21 0.15 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3R 29147104 29147109 - 3R_29147104_29147109_- 0.938650389 0.808354586 0.873502488 0.092133044 CG11882 FBtr0335407|FBtr0085411 29147014|29147014 29147192|29147192 3R - 29147080 29147136 3'utr CG11882 FlyBase G55548.1 TATTTTGTAATTGTTGTAAAAGACTGTTGGTGCGAATATTTCGAATGTGATTAGGCA 71 29147110 0.839739369 7 68 501 0.966292135 1.457377197 0.325842697 0.197183099 0.359550562 71 1 2 86 3R:29147080-29147136 6 CG11882 FBtr0085411|FBtr0335407 29147014|29147014 29147192|29147192 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3R - 29147080 29147140 3'utr CG11882 FlyBase G41917.1 ATTGTATTTTGTAATTGTTGTAAAAGACTGTTGGTGCGAATATTTCGAATGTGATTAGGCA 51 29147110 0.98323519 10 49 372 0.971830986 1.838849091 0.295774648 0.294117647 0.492957746 51 2 0 69 3R:29147080-29147140 6 59.5 3269 FBgn0039642 68.66666667 8.353333333 12.70666667 0.866504854 7.122905028 4.682581322 1 1 1 0.15 dme-miR-965-3p 7mer-m8 TACGCTT 3R 29149797 29149803 + 3R_29149797_29149803_+ 0.620204755 0.620204848 0.620204801 0 Pglym78 FBtr0100483|FBtr0100482|FBtr0085384 29149734|29149734|29149734 29149901|29149901|29149901 3R + 29149739 29149869 3'utr Pglym78 FlyBase G46655.1 CGCAGGCCACACCTCATGAGAATCCACTCAAATACGGCACAAGTCAGAGCATTCTGATTACGCTTCTGTTCAAGATGTAGCCAATCCCATTCGTTGTTGTTGTTCGCGTAGCAGTAATTGGTTCATCCCCA 70 29149796 0.986152669 14 68 579 0.987951807 1.913813852 0.409638554 0.157142857 0.289156627 70 1 0 82 3R:29149739-29149869 7 Pglym78 FBtr0085384|FBtr0100482|FBtr0100483 29149734|29149734|29149734 29149901|29149901|29149901 TACGCTT 7mer-m8 dme-miR-965-3p 3R + 29149742 29149846 3'utr Pglym78 FlyBase G35189.1 AGGCCACACCTCATGAGAATCCACTCAAATACGGCACAAGTCAGAGCATTCTGATTACGCTTCTGTTCAAGATGTAGCCAATCCCATTCGTTGTTGTTGTTCGCG 33 29149797 0.986685174 8 31 258 0.963636364 1.247154615 0.309090909 0.40625 0.654545455 32 0 2 53 3R:29149742-29149846 7 41 3270 FBgn0014869 753.3333333 91.53 139.47 0.054424779 0.447940566 0.293970029 1 0 0.5 0.15 dme-miR-8-3p 7mer-A1 AGTATTA 3R 29164609 29164615 + 3R_29164609_29164615_+ 0.823348651 0.823329234 0.823338943 1.38E-05 CG11897 FBtr0085386|FBtr0085387 29164548|29164548 29164966|29164966 3R + 29164563 29164625 3'utr CG11897 FlyBase G46685.1 TCATCTACTTGTAGATTTGCTTAAGGTTTAGATCATAAGAACTGAAAGTATTATGTACATAGC 24 29164598 0.979632951 6 22 159 0.90625 1.161368002 0.0625 0.291666667 0.46875 24 2 1 29 3R:29164563-29164625 7 CG11897 FBtr0085387|FBtr0085386 29164548|29164548 29164966|29164966 AGTATTA 7mer-A1 dme-miR-8-3p 3R + 29164562 29164624 3'utr CG11897 FlyBase G35211.1 CTCATCTACTTGTAGATTTGCTTAAGGTTTAGATCATAAGAACTGAAAGTATTATGTACATAG 23 29164598 0.979230709 7 22 154 0.967741935 1.176091259 0.419354839 0.347826087 0.516129032 23 0 1 30 3R:29164562-29164624 7 20.5 3271 FBgn0039644 385.6666667 9.473333333 14.69333333 0.05315471 2.163969036 1.395190563 11 11 11 0.15 dme-miR-252-5p 7mer-m8 GTACTTA 3R 29164664 29164670 + 3R_29164664_29164670_+ 0.588298348 0.586887691 0.587593019 0.000997445 CG11897 FBtr0085386|FBtr0085387 29164548|29164548 29164966|29164966 3R + 29164643 29164687 3'utr CG11897 FlyBase G46686.1 TAACGAAATACCTATTGCCTTGTACTTACGGAATATTTGTAAGCT 18 29164662 0.690893157 5 17 133 1 1.301029996 0.15 0.111111111 0.2 18 0 0 20 3R:29164643-29164687 7 CG11897 FBtr0085387|FBtr0085386 29164548|29164548 29164966|29164966 GTACTTA 7mer-m8 dme-miR-252-5p 3R + 29164641 29164676 3'utr CG11897 FlyBase G35212.1 GCTAACGAAATACCTATTGCCTTGTACTTACGGAAT 14 29164658 0.697929763 3 10 92 0.818181818 0.77815125 0.045454545 0.428571429 0.636363636 14 2 2 18 3R:29164641-29164676 7 13.5 3272 FBgn0039644 385.6666667 9.473333333 14.69333333 0.035004322 1.42505278 0.918784029 2 6 4 0.15 dme-miR-304-5p 7mer-m8 TGAGATT 3R 29221864 29221870 + 3R_29221864_29221870_+ 0.620138681 0.620145218 0.620141949 4.60E-06 Ef1gamma FBtr0085393|FBtr0085392|FBtr0302442 29221775|29221775|29221775 29222109|29222109|29222109 3R + 29221745 29222006 stop_codon Ef1gamma FlyBase G46701.1 GCAAGTTCAACCAGGGCAAGATCTTCAAGTAATCATCTCTGCCTAGCCCAGCTCCGCTCAAAGCAGCAGCCGCCCTCATTTAGACCAACAACAACAACAGCAGCAGTAACAATAAAGTTTGAGATTTAAAATGCAGGAAGAGCACAATGCCCATTTCTTAAGTTCCAACTGATAAGTACACTAAAGATATCCAATATCTGTCGTGCTGCCTCCCACGTTTGGCGGAATCGTGTGTCTCGCCTCCTGCATTTTGTACTGGAGA 65 29221863 0.975518867 26 57 360 0.871794872 1.054357662 0.205128205 0.169230769 0.307692308 65 5 5 68 3R:29221745-29222006 7 Ef1gamma FBtr0302442|FBtr0085392|FBtr0085393 29221775|29221775|29221775 29222109|29222109|29222109 TGAGATT 7mer-m8 dme-miR-304-5p 3R + 29221752 29221924 stop_codon Ef1gamma FlyBase G35225.1 CAACCAGGGCAAGATCTTCAAGTAATCATCTCTGCCTAGCCCAGCTCCGCTCAAAGCAGCAGCCGCCCTCATTTAGACCAACAACAACAACAGCAGCAGTAACAATAAAGTTTGAGATTTAAAATGCAGGAAGAGCACAATGCCCATTTCTTAAGTTCCAACTGATAAGTACA 32 29221863 0.97091587 13 29 168 0.954545455 1.62324929 0.295454545 0.375 0.545454545 32 2 0 42 3R:29221752-29221924 7 17 3273 FBgn0029176 8118.963333 592.2866667 901.75 0.002093863 0.028702318 0.018852232 1 1 1 0.15 dme-miR-283-5p 7mer-m8 TGATATT 3R 29222040 29222046 + 3R_29222040_29222046_+ 0.523070542 0.619561546 0.571316044 0.06822944 Ef1gamma FBtr0085393|FBtr0085392|FBtr0302442 29221775|29221775|29221775 29222109|29222109|29222109 3R + 29222028 29222075 3'utr Ef1gamma FlyBase G46702.1 CATAACACAGCATGATATTGTCAACGGAACAGCCGCCTGCAGTCAGAA 10 29222045 0.823103133 4 10 32 1 1.113943352 0.230769231 0.2 0.384615385 10 0 0 13 3R:29222028-29222075 7 Ef1gamma FBtr0302442|FBtr0085392|FBtr0085393 29221775|29221775|29221775 29222109|29222109|29222109 TGATATT 7mer-m8 dme-miR-283-5p 3R + 29222025 29222083 3'utr Ef1gamma FlyBase G35226.1 AAGCATAACACAGCATGATATTGTCAACGGAACAGCCGCCTGCAGTCAGAAAATATTTA 11 29222043 0.954670349 6 11 51 1 1.113943352 0.307692308 0.181818182 0.307692308 11 0 0 13 3R:29222025-29222083 7 8 3274 FBgn0029176 8118.963333 592.2866667 901.75 0.000985347 0.013506973 0.008871638 -5 -3 -4 0.15 dme-miR-283-5p 8mer-A1 TGATATTA 3R 29235069 29235076 + 3R_29235069_29235076_+ 0.592061036 0.591837781 0.591949408 0.000157826 CG15817 FBtr0300833|FBtr0333818|FBtr0300832 29233962|29233962|29233962 29235162|29235302|29235162 3R + 29235037 29235120 3'utr CG15817 FlyBase G46717.1 AGTTCTATTTTTTTCCAAGAGCGCTGCTATAGTGATATTAACATTTACAGAGCAAAGATTTGTGTACATTGTAATTTGTAAAGT 101 29235065 0.71315795 10 96 729 0.935483871 1.763427994 0.088709677 0.178217822 0.330645161 101 7 1 116 3R:29235037-29235120 8 CG15817 FBtr0300832|FBtr0333818|FBtr0300833 29233962|29233962|29233962 29235162|29235302|29235162 TGATATTA 8mer-A1 dme-miR-283-5p 3R + 29235037 29235128 3'utr CG15817 FlyBase G35239.1 AGTTCTATTTTTTTCCAAGAGCGCTGCTATAGTGATATTAACATTTACAGAGCAAAGATTTGTGTACATTGTAATTTGTAAAGTTTACATAT 62 29235097 0.961602065 12 62 458 1 1.986771734 0.12371134 0.338709677 0.577319588 62 0 0 97 3R:29235037-29235128 8 54 3275 FBgn0028476 401.67 10.06 15.48 0.134438718 5.367793241 3.488372093 4 -28 -12 0.15 dme-miR-317-3p 6mer2-7 GTGTTC 3R 29315599 29315604 - 3R_29315599_29315604_- 0.978001474 0.975828354 0.976914914 0.001536614 Cnx99A FBtr0085438|FBtr0334873|FBtr0085437 29315252|29315252|29315252 29315834|29315834|29315834 3R - 29315572 29315669 3'utr Cnx99A FlyBase G55596.1 ACACACTCGTTTCGGTTTAGTCAACTCTGTACGTACTTTTGCCGTATTATCGTTGCATTTCTGTCGTGTTCGACCCTCTGTCGTCCCCATATCTCCTA 17 29315590 0.672654886 12 14 148 0.842105263 0.726998728 0.052631579 0.117647059 0.210526316 17 1 2 16 3R:29315572-29315669 6 Cnx99A FBtr0085437|FBtr0085438|FBtr0334873 29315252|29315252|29315252 29315834|29315834|29315834 GTGTTC 6mer2-7 dme-miR-317-3p 3R - 29315576 29315671 3'utr Cnx99A FlyBase G41952.1 ACACACACTCGTTTCGGTTTAGTCAACTCTGTACGTACTTTTGCCGTATTATCGTTGCATTTCTGTCGTGTTCGACCCTCTGTCGTCCCCATATCT 11 29315590 0.986944929 9 10 95 0.947368421 1.255272505 0.105263158 0.545454545 0.736842105 11 1 0 18 3R:29315576-29315671 6 6.5 3276 FBgn0015622 4351.313333 201.68 309.1566667 0.001493802 0.032229274 0.021024939 -14 -14 -14 0.15 dme-miR-184-3p 7mer-m8 TCCGTCC 3R 29485121 29485127 + 3R_29485121_29485127_+ 0.661590108 0.661603587 0.661596847 9.55E-06 Ptp99A FBtr0303148|FBtr0303454|FBtr0085422|FBtr0085424 29484488|29484488|29484488|29484488 29486704|29487131|29486704|29486704 3R + 29485107 29485145 5'utr Ptp99A FlyBase G46727.1 TCGAATCGATTCAGTCCGTCCTAGTATCTGTTATTCTTT 10 29485116 0.688481828 5 10 82 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 3R:29485107-29485145 7 Ptp99A FBtr0085422|FBtr0085424|FBtr0303148|FBtr0303454 29484488|29484488|29484488|29484488 29486704|29486704|29486704|29487131 TCCGTCC 7mer-m8 dme-miR-184-3p 3R + 29485106 29485142 5'utr Ptp99A FlyBase G35249.1 TTCGAATCGATTCAGTCCGTCCTAGTATCTGTTATTC 9 29485117 0.718774042 5 8 62 0.916666667 0.740362689 0.333333333 0.333333333 0.5 9 0 1 11 3R:29485106-29485142 7 9.5 3277 FBgn0004369 285.67 6.166666667 9.486666667 0.033255155 1.540540541 1.001405481 5 4 4.5 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 29499269 29499274 - 3R_29499269_29499274_- 0.724888057 0.99038001 0.857634033 0.187731123 Trc8 FBtr0085432|FBtr0085430|FBtr0333188|FBtr0085429 29499023|29499023|29499023|29499120 29499641|29499641|29499641|29499641 3R - 29499250 29499317 coding-3'utr Trc8 FlyBase G55625.1 AGCTGAACGCTGATCGGCAATGAGACGATAATTCAAACGGAGATGATCTACATATGTACGTTAAGTTT 29 29499274 0.928069783 3 25 148 0.861111111 1.014240439 0.111111111 0.24137931 0.388888889 29 3 2 31 3R:29499250-29499317 6 Trc8 FBtr0085432|FBtr0085430|FBtr0333188|FBtr0085429 29499023|29499023|29499023|29499120 29499641|29499641|29499641|29499641 TGATCT 6mer3-8 dme-bantam-3p 3R - 29499245 29499312 3'utr Trc8 FlyBase G41970.1 AACGCTGATCGGCAATGAGACGATAATTCAAACGGAGATGATCTACATATGTACGTTAAGTTTATGGT 31 29499297 0.940686461 6 22 161 0.723404255 0.62838893 0.170212766 0.387096774 0.595744681 31 6 7 34 3R:29499245-29499312 6 17.5 3278 FBgn0039668 519.2566667 17.16333333 26.17333333 0.033702023 1.019615459 0.66861946 0 23 11.5 0.15 dme-miR-965-3p 6mer3-8 TACGCT 3R 29599189 29599194 + 3R_29599189_29599194_+ 0.961338897 0.970876394 0.966107645 0.006744031 alph FBtr0085445|FBtr0085443|FBtr0085446|FBtr0085442 29598177|29597798|29598177|29598177 29599231|29599234|29599231|29599231 3R + 29599164 29599211 5'utr alph FlyBase G46750.2 AAATCTTAAGAGAGAAAAGCAAAATTACGCTCGAGTTTGTAGTAAATG 159 29599188 0.881126017 6 154 790 0.971098266 1.62324929 0.144508671 0.088050314 0.161849711 159 2 3 168 3R:29599164-29599211 6 alph FBtr0085443|FBtr0085446|FBtr0085442|FBtr0085445 29597798|29598177|29598177|29598177 29599234|29599231|29599231|29599231 TACGCT 6mer3-8 dme-miR-965-3p 3R + 29599164 29599209 5'utr alph FlyBase G35264.1 AAATCTTAAGAGAGAAAAGCAAAATTACGCTCGAGTTTGTAGTAAA 65 29599188 0.958281791 4 63 302 0.956989247 1.472268752 0.096774194 0.369230769 0.559139785 65 2 2 89 3R:29599164-29599209 6 110.5 3279 FBgn0086361 5795.586667 263.87 406.87 0.019066232 0.418766817 0.271585519 1 1 1 0.15 dme-miR-79-3p 6mer3-8 TAGCTT 3R 29620687 29620692 + 3R_29620687_29620692_+ 0.998864347 0.84315149 0.921007919 0.110105577 CG1907 FBtr0085447 29620554 29620758 3R + 29620613 29620754 3'utr CG1907 FlyBase G46753.1 CGACGTTAAGTTTAAAGAAAACTTAGGGCATTTATATGTCGGCAATTCCGGTGACAATATTACATGATAACGATTAGCTTGAATGTTGAAACAGTTTTTCTAGCGCCATAAGTATAAAGTGGATTCTCAATAAAGCACAAAA 28 29620686 0.978554358 17 27 184 0.96875 1.190331698 0.28125 0.142857143 0.25 28 0 1 31 3R:29620613-29620754 6 CG1907 FBtr0085447 29620554 29620758 TAGCTT 6mer3-8 dme-miR-79-3p 3R + 29620653 29620699 3'utr CG1907 FlyBase G35266.1 GGCAATTCCGGTGACAATATTACATGATAACGATTAGCTTGAATGTT 8 29620686 0.972501854 2 8 49 1 1.113943352 0.461538462 0.375 0.615384615 8 0 0 13 3R:29620653-29620699 6 8 3280 FBgn0039674 372.3333333 27.88666667 42.61 0.021486124 0.286875448 0.187749355 1 1 1 0.15 dme-miR-33-5p 7mer-A1 AATGCAA 3R 29753170 29753176 + 3R_29753170_29753176_+ 0.759609282 0.735529846 0.747569564 0.017026778 yata FBtr0333822|FBtr0085477 29752956|29752956 29754528|29753328 3R + 29753116 29753202 3'utr yata FlyBase G46828.1 CATTTGGCCGCTCTGTGTGTGCTTTGTGTTTGTATTGGGTGCCAGTTTGCATTAAATGCAATCTCAGTGTCTCGAGCCTCCATTTCG 35 29753172 0.776217084 10 32 263 0.926829268 1.579783597 0.219512195 0.114285714 0.243902439 35 3 0 38 3R:29753116-29753202 7 yata FBtr0333822|FBtr0085477 29752956|29752956 29754528|29753328 AATGCAA 7mer-A1 dme-miR-33-5p 3R + 29753114 29753205 3'utr yata FlyBase G35323.1 CCCATTTGGCCGCTCTGTGTGTGCTTTGTGTTTGTATTGGGTGCCAGTTTGCATTAAATGCAATCTCAGTGTCTCGAGCCTCCATTTCGATT 23 29753183 0.979708004 14 23 185 1 1.505149978 0.25 0.304347826 0.5 23 0 0 32 3R:29753114-29753205 7 19.5 3281 FBgn0260990 1641.69 44.94333333 68.84666667 0.011878004 0.4338797 0.283238114 -2 -13 -7.5 0.15 dme-miR-1006-3p 6mer2-7 GAATTT 3R 29753657 29753662 + 3R_29753657_29753662_+ 0.999920171 0.999966997 0.999943584 3.31E-05 yata FBtr0333822 29752956 29754528 3R + 29753567 29753674 3'utr yata FlyBase G46832.1 GATGCCAATCCACGCGATTTTCGAGGGACAGTGAATATTTAGAAATCTAAACTAAACGTATTTTTGCGAATGGAGCGTAACCAAAATTGTGAATTTTAATACATAAAT 99 29753653 0.98167078 12 98 719 0.991935484 2.089905111 0.072580645 0.191919192 0.35483871 99 1 0 123 3R:29753567-29753674 6 yata FBtr0333822 29752956 29754528 GAATTT 6mer2-7 dme-miR-1006-3p 3R + 29753569 29753674 3'utr yata FlyBase G35327.1 TGCCAATCCACGCGATTTTCGAGGGACAGTGAATATTTAGAAATCTAAACTAAACGTATTTTTGCGAATGGAGCGTAACCAAAATTGTGAATTTTAATACATAAAT 64 29753653 0.981141553 10 64 470 1 2.008600172 0.049019608 0.453125 0.656862745 64 0 0 102 3R:29753569-29753674 6 71 3282 FBgn0260990 1641.69 44.94333333 68.84666667 0.043248116 1.579767114 1.031277234 4 4 4 0.15 dme-miR-304-5p 6mer3-8 TGAGAT 3R 29793772 29793777 + 3R_29793772_29793777_+ 0.986065634 0.970345371 0.978205503 0.01111586 kay FBtr0099990|FBtr0099988|FBtr0290076|FBtr0099989|FBtr0339165 29793023|29793023|29793023|29793023|29793023 29794113|29794113|29794113|29794113|29794113 3R + 29793713 29793807 3'utr kay FlyBase G46862.1 AAAGCTAAACAATAATGGCGTTGAAGCGAGTTTTATATTGAGCAAAAGCAAATGTGAAATGAGATAAATATACTTATTGTGTACTCTGTAAGCTG 338 29793772 0.863552508 18 318 1418 0.94188862 1.686859614 0.457627119 0.162721893 0.314769976 338 17 7 389 3R:29793713-29793807 6 kay FBtr0099989|FBtr0339165|FBtr0099988|FBtr0290076|FBtr0099990 29793023|29793023|29793023|29793023|29793023 29794113|29794113|29794113|29794113|29794113 TGAGAT 6mer3-8 dme-miR-304-5p 3R + 29793712 29793814 3'utr kay FlyBase G35358.1 TAAAGCTAAACAATAATGGCGTTGAAGCGAGTTTTATATTGAGCAAAAGCAAATGTGAAATGAGATAAATATACTTATTGTGTACTCTGTAAGCTGCAGTAGA 251 29793772 0.882069315 19 239 974 0.942465753 2.536558443 0.534246575 0.326693227 0.536986301 251 21 0 344 3R:29793712-29793814 6 239 3283 FBgn0001297 8038.743333 271.3133333 416.43 0.029731015 0.880900312 0.57392599 0 0 0 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 29800958 29800964 + 3R_29800958_29800964_+ 0.759705471 0.749908226 0.754806848 0.006927737 Drice FBtr0085482|FBtr0085482|FBtr0085482 29800916|29800916|29800916 29801584|29801584|29801584 3R + 29800902 29800976 stop_codon Drice FlyBase G46870.1 AGCCGGACGGGTTTGATGGCTAATGGTATGGATCAAACGGTGGGTACGGCGAGGTGTGTGATAAACCAAGTCGCA 84 29800956 0.961690115 10 77 383 0.920454545 1.306425028 0.079545455 0.035714286 0.079545455 84 4 3 81 3R:29800902-29800976 7 Drice FBtr0085482|FBtr0085482|FBtr0085482 29800916|29800916|29800916 29801584|29801584|29801584 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 29800901 29800978 stop_codon Drice FlyBase G35369.1 CAGCCGGACGGGTTTGATGGCTAATGGTATGGATCAAACGGTGGGTACGGCGAGGTGTGTGATAAACCAAGTCGCAAT 51 29800956 0.946941896 5 49 210 0.95 1.880813592 0.075 0.392156863 0.6125 51 4 0 76 3R:29800901-29800978 7 61 3284 FBgn0019972 801.2566667 50.41666667 76.82666667 0.076130412 1.209917355 0.793995141 2 2 2 0.15 dme-miR-33-5p 7mer-m1 AATGCAC 3R 29801526 29801532 + 3R_29801526_29801532_+ 0.809590652 0.825528072 0.817559362 0.011269444 Drice FBtr0085482 29800916 29801584 3R + 29801494 29801580 3'utr Drice FlyBase G46874.1 ATACTATTTCTATGCCATTTGTACTCTTATATAATGCACATTAGCAAATGTTCTCCTTTCAAGTTAACCGCTAATAAATCCGATTGA 17 29801542 0.987907305 11 17 153 1 1.342422681 0 0.235294118 0.409090909 17 0 0 22 3R:29801494-29801580 7 Drice FBtr0085482 29800916 29801584 AATGCAC 7mer-m1 dme-miR-33-5p 3R + 29801528 29801581 3'utr Drice FlyBase G35374.1 TGCACATTAGCAAATGTTCTCCTTTCAAGTTAACCGCTAATAAATCCGATTGAA 6 29801542 0.979483929 5 6 41 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3R:29801528-29801581 4 3 3285 FBgn0019972 801.2566667 50.41666667 76.82666667 0.003744119 0.059504132 0.039048941 -16 -16 -16 0.15 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 29804321 29804326 - 3R_29804321_29804326_- 0.998715602 0.999311961 0.999013781 0.000421718 ncd FBtr0344976|FBtr0085534 29804288|29804288 29804405|29804405 3R - 29804291 29804362 3'utr ncd FlyBase G55721.1 ACCTGTTATTGCTTAATTTATGTGTGTTTACTTTTAGTGCAAATAAACTAATAAAGTGCTGGAATTCAAAGC 15 29804328 0.989524394 6 15 145 1 1.278753601 0.368421053 0.266666667 0.421052632 15 0 0 19 3R:29804291-29804362 6 ncd FBtr0344976|FBtr0085534 29804288|29804288 29804405|29804405 GTGCAA 6mer3-8 dme-miR-92b-3p 3R - 29804294 29804352 3'utr ncd FlyBase G42042.1 GCTTAATTTATGTGTGTTTACTTTTAGTGCAAATAAACTAATAAAGTGCTGGAATTCAA 9 29804329 0.989776452 5 8 77 1 1.230448921 0.470588235 0.333333333 0.647058824 9 0 0 17 3R:29804294-29804352 6 9.5 3286 FBgn0002924 2335.956667 120.6666667 184.3066667 0.004066856 0.078729282 0.051544527 2 3 2.5 0.15 dme-miR-965-3p 7mer-A1 ACGCTTA 3R 29827492 29827498 - 3R_29827492_29827498_- 0.821348321 0.8196391 0.82049371 0.001208587 Atg16 FBtr0339144|FBtr0085528|FBtr0085529|FBtr0085530 29827279|29827279|29827279|29827279 29827559|29827559|29827559|29827559 3R - 29827417 29827536 3'utr Atg16 FlyBase G55743.2 CTCGAGCCAGTCGGATGCAATCCAATTCCGAAACTGAAACGCTTAAGAAGTCAGAGCAGTGCTGCAATCTGCTGTACATAGTAAATTCGGTCGACGTTTTAACAACTTTACTTGATTATT 30 29827511 0.855641554 10 27 154 0.918918919 1.531478917 0.189189189 0.2 0.351351351 30 3 0 34 3R:29827417-29827536 7 Atg16 FBtr0085530|FBtr0085529|FBtr0085528|FBtr0339144 29827279|29827279|29827279|29827279 29827559|29827559|29827559|29827559 ACGCTTA 7mer-A1 dme-miR-965-3p 3R - 29827456 29827535 3'utr Atg16 FlyBase G42060.2 TCGAGCCAGTCGGATGCAATCCAATTCCGAAACTGAAACGCTTAAGAAGTCAGAGCAGTGCTGCAATCTGCTGTACATAG 19 29827511 0.811113343 9 14 70 0.8 1.301029996 0.08 0.315789474 0.48 19 5 0 20 3R:29827456-29827535 7 9 3287 FBgn0039705 890.6666667 49.85333333 76.6 0.01010479 0.180529553 0.117493473 13 13 13 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 29855685 29855690 - 3R_29855685_29855690_- 0.947288244 0.941400821 0.944344533 0.00416302 dgt1 FBtr0335006|FBtr0335006|FBtr0335006 29855627|29855627|29855627 29855943|29855943|29855943 3R - 29855673 29855702 3'utr dgt1 FlyBase G55758.1 AAGCAAGCCCTTTGTGATCGACCCTGAATA 17 29855691 0.774802664 3 17 81 1 1.342422681 0.045454545 0.176470588 0.363636364 17 0 0 22 3R:29855673-29855702 6 dgt1 FBtr0335006|FBtr0335006|FBtr0335006 29855627|29855627|29855627 29855943|29855943|29855943 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 29855659 29855709 3'utr dgt1 FlyBase G42073.1 ACTGTCTAAGCAAGCCCTTTGTGATCGACCCTGAATAAATTGCCGACCTCT 11 29855691 0.953786971 3 11 52 1 1.204119983 0 0.363636364 0.5625 11 0 0 16 3R:29855659-29855709 6 13.5 3288 FBgn0039710 509.1766667 36.19333333 55.42333333 0.026513391 0.372996869 0.24357972 1 1 1 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 3R 29874914 29874919 + 3R_29874914_29874919_+ 0.983261626 0.985701044 0.984481335 0.001724916 CG34133 FBtr0301073|FBtr0335004 29874565|29874565 29875159|29875159 3R + 29874872 29874941 3'utr CG34133 FlyBase G46948.1 CGAAAGTCAATTGTATATTGTTATGCCCTTGTAAGTTACATTTTGACTGTACAGATGCTTTGATTTCGTT 21 29874931 0.689624384 11 20 200 0.958333333 1.361727836 0.416666667 0.095238095 0.208333333 21 1 0 23 3R:29874872-29874941 6 CG34133 FBtr0335004|FBtr0301073 29874565|29874565 29875159|29875159 TTGACT 6mer3-8 dme-miR-1012-3p 3R + 29874868 29874941 3'utr CG34133 FlyBase G35429.1 ATTTCGAAAGTCAATTGTATATTGTTATGCCCTTGTAAGTTACATTTTGACTGTACAGATGCTTTGATTTCGTT 10 29874931 0.99052473 6 10 104 1 1.146128036 0.214285714 0.4 0.571428571 10 0 0 14 3R:29874868-29874941 6 12 3289 FBgn0083969 922.7466667 26.26 40.29 0.013004653 0.456968774 0.297840655 -17 -17 -17 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 29902981 29902986 + 3R_29902981_29902986_+ 0.937760413 0.917800808 0.92778061 0.014113569 CG31038 FBtr0085494|FBtr0333274|FBtr0333275|FBtr0085497|FBtr0085498 29902590|29902590|29902590|29902590|29902590 29903231|29903231|29903231|29903231|29903231 3R + 29902953 29903000 3'utr CG31038 FlyBase G46952.1 ACCAGCCTCTGTGGTTAGGAGTCCTTTGTGATCTTCAGTTGTAAGTTT 14 29902986 0.961245604 5 11 140 0.785714286 0.740362689 0.285714286 0 0 14 2 1 11 3R:29902953-29903000 6 CG31038 FBtr0085494|FBtr0085498|FBtr0085497|FBtr0333275|FBtr0333274 29902590|29902590|29902590|29902590|29902590 29903231|29903231|29903231|29903231|29903231 TGATCT 6mer3-8 dme-bantam-3p 3R + 29902955 29903000 3'utr CG31038 FlyBase G35432.1 CAGCCTCTGTGGTTAGGAGTCCTTTGTGATCTTCAGTTGTAAGTTT 13 29902978 0.659194469 4 13 151 1 1.301029996 0.1 0.384615385 0.6 13 0 0 20 3R:29902955-29903000 6 13 3290 FBgn0051038 142.6666667 4.59 7.016666667 0.091121495 2.832244009 1.852731591 -5 3 -1 0.15 dme-miR-7-5p 6mer3-8 GTCTTC 3R 29933964 29933969 + 3R_29933964_29933969_+ 0.646224733 0.999830506 0.82302762 0.250037059 CG42557 FBtr0301256 29933904 29934587 3R + 29933942 29933992 start_codon CG42557 FlyBase G46953.1 AATGGAATCCACGTTCGGTAAAGTCTTCATGTTTCTCACGGACCTCGCTTG 12 29933971 0.983661954 2 12 110 1 1.113943352 0.153846154 0.083333333 0.153846154 12 0 0 13 3R:29933942-29933992 6 CG42557 FBtr0301256 29933904 29934587 GTCTTC 6mer3-8 dme-miR-7-5p 3R + 29933943 29933990 start_codon CG42557 FlyBase G35433.1 ATGGAATCCACGTTCGGTAAAGTCTTCATGTTTCTCACGGACCTCGCT 11 29933971 0.987636358 2 8 103 0.733333333 1.041392685 0.4 0.272727273 0.466666667 11 4 0 11 3R:29933943-29933990 6 11.5 3291 FBgn0260759 80.26 9.18 14.10333333 0.143284326 1.252723312 0.815410069 -7 -7 -7 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 29991254 29991259 - 3R_29991254_29991259_- 0.95870281 0.951107657 0.954905234 0.005370547 Acph-1 FBtr0085610|FBtr0085610|FBtr0085610|FBtr0085609|FBtr0085609|FBtr0085609 29991142|29991142|29991142|29991142|29991142|29991142 29991583|29991583|29991583|29991583|29991583|29991583 3R - 29991227 29991283 3'utr Acph-1 FlyBase G55798.1 AGTGAAAGATATGGAATACAAAGACTGTGAATAGCGATCTTGAAGTTGCATACATAT 45 29991256 0.957190171 5 44 178 1 1.72427587 0.150943396 0.181818182 0.320754717 44 0 0 53 3R:29991227-29991283 6 Acph-1 FBtr0085610|FBtr0085610|FBtr0085610|FBtr0085609|FBtr0085609|FBtr0085609 29991142|29991142|29991142|29991142|29991142|29991142 29991583|29991583|29991583|29991583|29991583|29991583 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 29991238 29991290 3'utr Acph-1 FlyBase G42100.1 GTTATTCAGTGAAAGATATGGAATACAAAGACTGTGAATAGCGATCTTGAAGT 49 29991255 0.806846915 7 48 193 0.984375 1.799340549 0.25 0.224489796 0.40625 49 1 0 63 3R:29991238-29991290 6 44.5 3292 FBgn0000032 305.1533333 19.16 28.97333333 0.145828327 2.322546973 1.535895076 -3 -4 -3.5 0.15 dme-miR-276a-3p 7mer-m8 AGTTCCT 3R 30010093 30010099 + 3R_30010093_30010099_+ 0.607551726 0.502996261 0.555273994 0.073931832 Nlp FBtr0334701|FBtr0085552 30009979|30009979 30010352|30010352 3R + 30009927 30010150 stop_codon Nlp FlyBase G46980.1 AAGATCGAGAACGCCGCCGATGGTAAAAATGCCAAGAACAACAAGAAGAAGTAAACTGCTGACCGCCAATCATCCATCGAGGTTTAAGCTATGAACGTGTAGATTTTAAAGCAAAAACAGTTTTAGGCCCTATAATACAATACGATGCATACTGAGAATACAATCTAGTTCCTTTTGAACAGCTCCTTTTACATTCAATTCAAAGACAACGTTGTGTGCTCGGT 40 30010113 0.999429126 25 38 244 0.94 1.672097858 0.22 0.2 0.36 40 3 0 47 3R:30009927-30010150 7 Nlp FBtr0334701|FBtr0085552 30009979|30009979 30010352|30010352 AGTTCCT 7mer-m8 dme-miR-276a-3p 3R + 30009969 30010134 stop_codon Nlp FlyBase G35448.1 AAGAAGAAGTAAACTGCTGACCGCCAATCATCCATCGAGGTTTAAGCTATGAACGTGTAGATTTTAAAGCAAAAACAGTTTTAGGCCCTATAATACAATACGATGCATACTGAGAATACAATCTAGTTCCTTTTGAACAGCTCCTTTTACATTCAATTCAAAGACA 34 30010100 0.974000295 17 30 187 0.94 1.672097858 0.06 0.441176471 0.62 34 3 0 47 3R:30009969-30010134 7 7.5 3293 FBgn0016685 3113.246667 427.1766667 652.8633333 0.002409061 0.017557139 0.011487856 -20 -7 -13.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 30016092 30016099 - 3R_30016092_30016099_- 0.631081379 0.631133033 0.631107206 3.65E-05 Mgat2 FBtr0334705|FBtr0085602|FBtr0100418 30015511|30015511|30015511 30016371|30016371|30016371 3R - 30016063 30016117 3'utr Mgat2 FlyBase G55839.1 TCATACTATAAGTAACCCTCTAGTCACACATTCAATTGGAATCGCCGTGTTGTTG 42 30016099 0.726505363 8 37 207 0.884615385 1.185636577 0 0.19047619 0.346153846 42 4 2 46 3R:30016063-30016117 8 Mgat2 FBtr0100418|FBtr0085602|FBtr0334705 30015511|30015511|30015511 30016371|30016371|30016371 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R - 30016053 30016115 3'utr Mgat2 FlyBase G42129.1 ATACTATAAGTAACCCTCTAGTCACACATTCAATTGGAATCGCCGTGTTGTTGCAACCTCCAA 32 30016099 0.827681364 8 30 139 0.941176471 1.681241237 0 0.40625 0.62745098 32 3 0 48 3R:30016053-30016115 8 32.5 3294 FBgn0039738 328.6966667 12.42333333 18.86666667 0.098875356 2.616045076 1.722614841 0 0 0 0.15 dme-miR-304-5p 6mer2-7 GAGATT 3R 30034240 30034245 + 3R_30034240_30034245_+ 0.896985365 0.935109041 0.916047203 0.026957456 Axn FBtr0300600 30031347 30035311 3R + 30034200 30034372 stop_codon Axn FlyBase G46997.1 GACGCACTGCGAGGACCCGGACAGTCCAGTGATTCAGGAAGAGATTGTTAACGACTCCGACATACTGCCGCTATTCGGAGACAAAGCGATGGGTCTTGTCAAGCCATCCGATTAATATTAAGCATTTAGCGTAGATTTTGTATTAAGGCAAATCGTGAGTGTGGCTTGGTGCA 48 30034233 0.955991947 17 48 229 1 1.748188027 0.160714286 0.145833333 0.267857143 48 0 0 56 3R:30034200-30034372 6 Axn FBtr0300600 30031347 30035311 GAGATT 6mer2-7 dme-miR-304-5p 3R + 30034186 30034288 intron-3'utr Axn FlyBase G35462.1 AGGTTCTTCTTCAAGACGCACTGCGAGGACCCGGACAGTCCAGTGATTCAGGAAGAGATTGTTAACGACTCCGACATACTGCCGCTATTCGGAGACAAAGCGA 30 30034232 0.950631355 11 26 113 0.833333333 1.653212514 0.222222222 0.5 0.722222222 30 9 0 45 3R:30034186-30034288 6 20.5 3295 FBgn0026597 1043.036667 27.21666667 41.75333333 0.019654151 0.753214942 0.490978764 7 8 7.5 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 30034555 30034560 + 3R_30034555_30034560_+ 0.997587744 0.668703653 0.833145699 0.232556107 Axn FBtr0085553|FBtr0290030|FBtr0085554|FBtr0334703|FBtr0334702|FBtr0300600|FBtr0085555 30034313|30034313|30034313|30034313|30034313|30031347|30034313 30035311|30035311|30034919|30035311|30035311|30035311|30035311 3R + 30034498 30034575 3'utr Axn FlyBase G46999.1 GTAAGCATCACAAACTACTCTCTGCGGGGGCAATGTATTTTTCTGTACAACAAAAACTGATCTATTCACCAGCCACCC 59 30034562 0.60023803 10 59 259 1 1.84509804 0.085714286 0.169491525 0.3 59 0 0 70 3R:30034498-30034575 6 Axn FBtr0300600|FBtr0085555|FBtr0334702|FBtr0085554|FBtr0334703|FBtr0085553|FBtr0290030 30031347|30034313|30034313|30034313|30034313|30034313|30034313 30035311|30035311|30035311|30034919|30035311|30035311|30035311 TGATCT 6mer3-8 dme-bantam-3p 3R + 30034501 30034575 3'utr Axn FlyBase G35465.1 AGCATCACAAACTACTCTCTGCGGGGGCAATGTATTTTTCTGTACAACAAAAACTGATCTATTCACCAGCCACCC 35 30034562 0.891273105 6 35 150 1 1.72427587 0.037735849 0.371428571 0.58490566 35 0 0 53 3R:30034501-30034575 6 39.5 3296 FBgn0026597 1043.036667 27.21666667 41.75333333 0.037870193 1.451316595 0.946032253 -7 -7 -7 0.15 dme-miR-92b-3p 7mer-A1 TGCAATA 3R 30034828 30034834 + 3R_30034828_30034834_+ 0.746273109 0.717886541 0.732079825 0.020072357 Axn FBtr0085553|FBtr0290030|FBtr0085554|FBtr0334703|FBtr0334702|FBtr0300600|FBtr0085555 30034313|30034313|30034313|30034313|30034313|30031347|30034313 30035311|30035311|30034919|30035311|30035311|30035311|30035311 3R + 30034803 30034848 3'utr Axn FlyBase G47000.1 TACCTTTTACTAACTACGGACTGCCTGCAATAAATTTTGTTAATAT 51 30034828 0.906043811 6 48 260 0.983050847 1.763427994 0 0.137254902 0.254237288 51 1 0 58 3R:30034803-30034848 7 Axn FBtr0300600|FBtr0085555|FBtr0334702|FBtr0085554|FBtr0334703|FBtr0085553|FBtr0290030 30031347|30034313|30034313|30034313|30034313|30034313|30034313 30035311|30035311|30035311|30034919|30035311|30035311|30035311 TGCAATA 7mer-A1 dme-miR-92b-3p 3R + 30034783 30034845 3'utr Axn FlyBase G35466.1 CTCGATTGGGATTTGTTTGTTACCTTTTACTAACTACGGACTGCCTGCAATAAATTTTGTTAA 35 30034828 0.971899113 6 34 211 0.955555556 1.156347201 0.088888889 0.228571429 0.4 35 0 2 43 3R:30034783-30034845 7 39 3297 FBgn0026597 1043.036667 27.21666667 41.75333333 0.037390824 1.432945499 0.934057161 0 0 0 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 30042986 30042992 + 3R_30042986_30042992_+ 0.659870908 0.661140584 0.660505746 0.000897813 Sry-alpha FBtr0085557|FBtr0346862 30042853|30042853 30043071|30043071 3R + 30042965 30042998 3'utr Sry-alpha FlyBase G47010.1 TAATTAGCTACCTAAGTCAATTGTGTTCTTTACA 22 30042985 0.801680176 2 22 228 1 1.361727836 0 0.045454545 0.086956522 22 0 0 23 3R:30042965-30042998 7 Sry-alpha FBtr0346862|FBtr0085557 30042853|30042853 30043071|30043071 TGTGTTC 7mer-m8 dme-miR-317-3p 3R + 30042965 30042997 3'utr Sry-alpha FlyBase G35473.1 TAATTAGCTACCTAAGTCAATTGTGTTCTTTAC 7 30042985 0.794980966 2 7 77 1 1.176091259 0 0.714285714 0.866666667 7 0 0 15 3R:30042965-30042997 7 14.5 3298 FBgn0003510 16.33666667 1.003333333 1.446666667 0.887573964 14.45182724 10.02304147 1 1 1 0.15 dme-miR-252-5p 6mer3-8 GTACTT 3R 30044839 30044844 + 3R_30044839_30044844_+ 0.999707715 0.999567414 0.999637565 9.92E-05 Sry-delta FBtr0085558 30044779 30044886 3R + 30044818 30044868 3'utr Sry-delta FlyBase G47019.1 CTAGTGTATTTCCTCCTCTTTGTACTTGATTATTGTAGATTCCTACAAAAT 84 30044838 0.783664992 10 84 1163 1 1.982271233 0.052083333 0.130952381 0.239583333 84 0 0 96 3R:30044818-30044868 6 Sry-delta FBtr0085558 30044779 30044886 GTACTT 6mer3-8 dme-miR-252-5p 3R + 30044802 30044859 3'utr Sry-delta FlyBase G35479.1 AATTGTTTATCTTTCCCTAGTGTATTTCCTCCTCTTTGTACTTGATTATTGTAGATTC 58 30044838 0.994172369 6 58 754 1 1.913813852 0.024390244 0.344827586 0.536585366 58 0 0 82 3R:30044802-30044859 6 70 3299 FBgn0003512 609.7433333 48.67 74.76 0.114802403 1.438257654 0.936329588 1 1 1 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3R 30048581 30048587 + 3R_30048581_30048587_+ 0.519054387 0.520689673 0.51987203 0.001156332 CG7943 FBtr0085560|FBtr0085559 30048217|30048217 30048665|30048665 3R + 30048565 30048646 3'utr CG7943 FlyBase G47026.1 TGTTCGCCAATAACTTTGTGATTGATTGAAGATACTACAACTGATTAATTAACGCGGTAGATTCAATGTTCTTAAACGAAAA 131 30048580 0.754764705 8 123 1114 0.957575758 1.596597096 0.254545455 0.213740458 0.375757576 131 4 3 158 3R:30048565-30048646 7 CG7943 FBtr0085560|FBtr0085559 30048217|30048217 30048665|30048665 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 30048565 30048607 3'utr CG7943 FlyBase G35484.1 TGTTCGCCAATAACTTTGTGATTGATTGAAGATACTACAACTG 84 30048580 0.707214988 6 81 699 0.968992248 2.096910013 0.333333333 0.345238095 0.573643411 84 4 0 125 3R:30048565-30048607 7 103 3300 FBgn0039741 255.38 18.77666667 28.61666667 0.403320542 5.485531688 3.599301107 1 1 1 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 3R 30057972 30057978 + 3R_30057972_30057978_+ 0.78248183 0.782762226 0.782622028 0.000198273 CG7950 FBtr0085563|FBtr0085564 30057934|30057934 30058131|30058131 3R + 30057955 30057983 3'utr CG7950 FlyBase G47036.1 GAGCTAGGTGTGACTTCGTACAAAATAAA 6 30057970 0.717180945 2 6 31 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 3R:30057955-30057983 7 CG7950 FBtr0085563|FBtr0085564 30057934|30057934 30058131|30058131 GTACAAA 7mer-A1 dme-miR-305-5p 3R + 30057955 30057988 3'utr CG7950 FlyBase G35489.1 GAGCTAGGTGTGACTTCGTACAAAATAAATAAAA 17 30057970 0.712796543 4 15 99 0.913043478 1.322219295 0 0.235294118 0.434782609 17 2 0 21 3R:30057955-30057988 7 11.5 3301 FBgn0260468 214.1466667 22.56333333 34.67333333 0.053701513 0.509676466 0.331666987 2 2 2 0.15 dme-miR-34-5p 6mer2-7 ACTGCC 3R 30121077 30121082 + 3R_30121077_30121082_+ 0.999423619 0.998685774 0.999054697 0.000521703 sima FBtr0344376|FBtr0344374|FBtr0344373|FBtr0344375 30120757|30120757|30120757|30120149 30121798|30121798|30121798|30121798 3R + 30121059 30121095 3'utr sima FlyBase G47060.1 AGTTTTGTAGCCATGTTAACTGCCTAGAACAGAAGAA 19 30121083 0.956777077 5 17 115 0.904761905 1.278753601 0.19047619 0.105263158 0.19047619 19 2 0 19 3R:30121059-30121095 6 sima FBtr0344376|FBtr0344374|FBtr0344373|FBtr0344375 30120757|30120757|30120757|30120149 30121798|30121798|30121798|30121798 ACTGCC 6mer2-7 dme-miR-34-5p 3R + 30121057 30121124 3'utr sima FlyBase G35504.1 ATAGTTTTGTAGCCATGTTAACTGCCTAGAACAGAAGAATATACACGTATGTAATTTAGTCTTAATGT 17 30121083 0.976756264 6 15 106 0.956521739 1.342422681 0.391304348 0.176470588 0.391304348 17 1 0 22 3R:30121057-30121124 6 17 3302 FBgn0266411 1469.71 34.50666667 52.49333333 0.011566908 0.492658423 0.323850648 -6 -6 -6 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 30121540 30121545 + 3R_30121540_30121545_+ 0.95164472 0.991578961 0.97161184 0.028237814 sima FBtr0344376|FBtr0344374|FBtr0344373|FBtr0344375 30120757|30120757|30120757|30120149 30121798|30121798|30121798|30121798 3R + 30121528 30121567 3'utr sima FlyBase G47062.1 ACCCGATTCAGTTGATCTAAACTTCAAATACTTTGAGCAT 21 30121539 0.979271172 3 20 145 1 1.431363764 0 0.285714286 0.444444444 21 0 0 27 3R:30121528-30121567 6 sima FBtr0344376|FBtr0344374|FBtr0344373|FBtr0344375 30120757|30120757|30120757|30120149 30121798|30121798|30121798|30121798 TGATCT 6mer3-8 dme-bantam-3p 3R + 30121528 30121555 3'utr sima FlyBase G35506.1 ACCCGATTCAGTTGATCTAAACTTCAAA 17 30121539 0.705496706 3 17 119 1 1.342422681 0 0.294117647 0.454545455 17 0 0 22 3R:30121528-30121555 6 18.5 3303 FBgn0266411 1469.71 34.50666667 52.49333333 0.012587517 0.536128284 0.352425705 1 1 1 0.15 dme-miR-12-5p 7mer-A1 ATACTCA 3R 30213387 30213393 - 3R_30213387_30213393_- 0.820623662 0.822434303 0.821528983 0.001280288 CecB FBtr0085640 30213313 30213475 3R - 30213368 30213404 3'utr CecB FlyBase G55877.1 AATGAAAATAGATACTCAATGCCAATGTCAAATTATT 8 30213385 0.946256182 4 8 34 1 1.146128036 0.071428571 0.375 0.642857143 8 0 0 14 3R:30213368-30213404 7 CecB FBtr0085640 30213313 30213475 ATACTCA 7mer-A1 dme-miR-12-5p 3R - 30213366 30213404 3'utr CecB FlyBase G42159.1 AATGAAAATAGATACTCAATGCCAATGTCAAATTATTAA 11 30213396 0.891514199 4 11 55 1 1.176091259 0 0.272727273 0.466666667 11 0 0 15 3R:30213366-30213404 7 9.5 3304 FBgn0000278 26.33333333 8.696666667 13.18 0.360759494 1.092372557 0.720789074 -8 3 -2.5 0.15 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 30361605 30361610 + 3R_30361605_30361610_+ 0.948191707 0.940116712 0.944154209 0.005709887 hdc FBtr0085619|FBtr0085620|FBtr0330311 30360539|30360539|30360539 30362093|30362093|30372382 3R + 30361569 30361616 3'utr hdc FlyBase G47086.1 ACCGGCCAGCAGCCACGACATCTTCACCGATCTCCTGTGCAACCTGAG 323 30361604 0.975646975 7 308 1952 0.948529412 1.888740961 0.529411765 0.207430341 0.37254902 323 17 4 387 3R:30361569-30361616 6 hdc FBtr0085620|FBtr0330311|FBtr0085619 30360539|30360539|30360539 30362093|30372382|30362093 GTGCAA 6mer3-8 dme-miR-92b-3p 3R + 30361570 30361616 3'utr hdc FlyBase G35519.1 CCGGCCAGCAGCCACGACATCTTCACCGATCTCCTGTGCAACCTGAG 223 30361604 0.974356711 6 217 1342 0.974576271 2.06069784 0.587570621 0.385650224 0.61299435 223 7 2 345 3R:30361570-30361616 6 270.5 3305 FBgn0010113 3260.306667 58.23333333 89.73 0.082967655 4.645105896 3.014599354 1 1 1 0.15 dme-miR-1008-3p 6mer2-7 GCTGTG 3R 30362338 30362343 + 3R_30362338_30362343_+ 0.999780817 0.9877981 0.993789458 0.008473048 hdc FBtr0330311 30360539 30372382 3R + 30362321 30362409 3'utr hdc FlyBase G47092.1 AACAAATCATGATAATTGCTGTGCTGCTCAATAACACAAAAAATCATTAAAATAAAAGGAGAAGGAGTAGAGTAGGAGAGTAAAACAGG 22 30362337 0.973597643 10 19 105 0.88 1.041392685 0.12 0.136363636 0.24 22 2 1 22 3R:30362321-30362409 6 hdc FBtr0330311 30360539 30372382 GCTGTG 6mer2-7 dme-miR-1008-3p 3R + 30362254 30362379 3'utr hdc FlyBase G35523.1 ATTTACATCACGATTGAGGGAAAAGTTTTATTTAGCAAAAATTGAAGGCAGGGCATTAAATTGTTTAAACAAATCATGATAATTGCTGTGCTGCTCAATAACACAAAAAATCATTAAAATAAAAGG 24 30362336 0.974045984 11 21 134 0.911764706 1.491361694 0.088235294 0.375 0.558823529 24 3 0 31 3R:30362254-30362379 6 11 3306 FBgn0010113 3260.306667 58.23333333 89.73 0.003373916 0.188895249 0.122589992 1 2 1.5 0.15 dme-bantam-3p 6mer2-7 GATCTC 3R 30362933 30362938 + 3R_30362933_30362938_+ 0.90853795 0.760870307 0.834704128 0.104416832 hdc FBtr0330311 30360539 30372382 3R + 30362847 30362998 3'utr hdc FlyBase G47095.1 AGTCTAAGTGTTAGGTTATAGCGATCTTCTTGTATATGTCTAGGGTTCTTCTCTTTGTCTAAATAGCAGAGCAGCCGTATGTGATGGATCTCTAAAGGTAGAGTGAGGACCCCGCAGGTGCGAGCAAACCACATGCAGGCACTCACTATCGA 375 30362939 0.939350247 27 334 2464 0.913242009 1.488116639 0.351598174 0.149333333 0.271689498 375 26 12 400 3R:30362847-30362998 6 hdc FBtr0330311 30360539 30372382 GATCTC 6mer2-7 dme-bantam-3p 3R + 30362842 30362994 3'utr hdc FlyBase G35525.1 TATTAAGTCTAAGTGTTAGGTTATAGCGATCTTCTTGTATATGTCTAGGGTTCTTCTCTTTGTCTAAATAGCAGAGCAGCCGTATGTGATGGATCTCTAAAGGTAGAGTGAGGACCCCGCAGGTGCGAGCAAACCACATGCAGGCACTCACTA 297 30362939 0.794945248 26 269 2013 0.907756813 1.335457901 0.381551363 0.420875421 0.639412998 297 25 19 433 3R:30362842-30362994 6 224.5 3307 FBgn0010113 3260.306667 58.23333333 89.73 0.068858553 3.855180309 2.501950295 -6 -6 -6 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 30363285 30363290 + 3R_30363285_30363290_+ 0.999998708 0.999464176 0.999731442 0.000377949 hdc FBtr0330311|FBtr0330311|FBtr0330311 30360539|30360539|30360539 30372382|30372382|30372382 3R + 30363269 30363300 3'utr hdc FlyBase G47097.1 AAAATAACTTTCCCGTCTGTGAAATTTTTAAT 10 30363283 0.635331799 7 9 88 0.818181818 0.954242509 0.090909091 0.1 0.181818182 10 2 0 9 3R:30363269-30363300 6 hdc FBtr0330311|FBtr0330311|FBtr0330311 30360539|30360539|30360539 30372382|30372382|30372382 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 30363273 30363294 3'utr hdc FlyBase G35528.1 TAACTTTCCCGTCTGTGAAATT 5 30363284 0.744774703 2 5 37 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:30363273-30363294 6 7 3308 FBgn0010113 3260.306667 58.23333333 89.73 0.002147037 0.120206068 0.078011813 2 1 1.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 30364315 30364320 + 3R_30364315_30364320_+ 0.999995838 0.998500054 0.999247946 0.00105762 hdc FBtr0330311|FBtr0330311|FBtr0330311 30360539|30360539|30360539 30372382|30372382|30372382 3R + 30364296 30364336 3'utr hdc FlyBase G47104.1 GAAAAACCTCCTCGAATAACTGTGAAATCCCCTTCCTTAGA 78 30364323 0.788175108 6 70 525 0.898876404 1.903089987 0.02247191 0.102564103 0.213483146 78 9 0 80 3R:30364296-30364336 6 hdc FBtr0330311|FBtr0330311|FBtr0330311 30360539|30360539|30360539 30372382|30372382|30372382 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 30364294 30364333 3'utr hdc FlyBase G35534.1 TTGAAAAACCTCCTCGAATAACTGTGAAATCCCCTTCCTT 38 30364323 0.827664009 5 35 241 0.947368421 1.431363764 0 0.368421053 0.578947368 38 2 1 54 3R:30364294-30364333 6 58 3309 FBgn0010113 3260.306667 58.23333333 89.73 0.017789738 0.995993131 0.646383595 -8 -8 -8 0.15 dme-miR-277-3p 7mer-A1 GCATTTA 3R 30364756 30364762 + 3R_30364756_30364762_+ 0.823349563 0.823349563 0.823349563 0 hdc FBtr0330311 30360539 30372382 3R + 30364673 30364803 3'utr hdc FlyBase G47106.1 AAGTACATACCCTATACCATATACCCTATACCGTATAAAACGTACACCTAACTAACCTAAATTGATAGAAACTACACTTTTTGGCATTTACTTGAGAGGATTATATATAAGTTTGGCACAGTTATATATAA 68 30364759 0.976689973 16 59 624 0.85 1.531478917 0.2875 0.132352941 0.2625 68 11 1 68 3R:30364673-30364803 7 hdc FBtr0330311 30360539 30372382 GCATTTA 7mer-A1 dme-miR-277-3p 3R + 30364705 30364785 3'utr hdc FlyBase G35537.1 GTATAAAACGTACACCTAACTAACCTAAATTGATAGAAACTACACTTTTTGGCATTTACTTGAGAGGATTATATATAAGTT 30 30364760 0.994444207 11 20 263 0.708333333 1.054357662 0.291666667 0.566666667 0.729166667 30 12 2 34 3R:30364705-30364785 7 34.5 3310 FBgn0010113 3260.306667 58.23333333 89.73 0.010581827 0.59244419 0.384486794 -3 -4 -3.5 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 30365656 30365661 + 3R_30365656_30365661_+ 0.999999976 0.999631176 0.999815576 0.000260781 hdc FBtr0330311 30360539 30372382 3R + 30365639 30365687 3'utr hdc FlyBase G47111.1 CCTTTTGAATCTTTTCGTGATCTTCAGTTACTGAAACATGCCAAAATCC 10 30365652 0.84015546 6 9 79 0.909090909 0.698970004 0.090909091 0.1 0.181818182 10 0 1 10 3R:30365639-30365687 6 hdc FBtr0330311 30360539 30372382 TGATCT 6mer3-8 dme-bantam-3p 3R + 30365599 30365687 3'utr hdc FlyBase G35542.1 ATATTTTATGTTCAACAAATGAAATATTTGCGCGCCTTTCCCTTTTGAATCTTTTCGTGATCTTCAGTTACTGAAACATGCCAAAATCC 12 30365655 0.990645419 8 12 112 1 1.204119983 0.0625 0.333333333 0.5 12 0 0 16 3R:30365599-30365687 6 8 3311 FBgn0010113 3260.306667 58.23333333 89.73 0.002453757 0.137378363 0.089156358 4 1 2.5 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 3R 30365802 30365808 + 3R_30365802_30365808_+ 0.744751599 0.710963016 0.727857308 0.023892148 hdc FBtr0330311 30360539 30372382 3R + 30365779 30365856 3'utr hdc FlyBase G47113.1 CTCAGATCATCTGATGACGAAATGTACAAATTGGTGAAGTTTAGGCACTTTCAACCGCAGTCCTCATCCGAATTCCCA 22 30365809 0.85876262 8 21 149 0.961538462 1.397940009 0.346153846 0.136363636 0.269230769 22 1 0 25 3R:30365779-30365856 7 hdc FBtr0330311 30360539 30372382 GTACAAA 7mer-A1 dme-miR-305-5p 3R + 30365777 30365817 3'utr hdc FlyBase G35543.1 TTCTCAGATCATCTGATGACGAAATGTACAAATTGGTGAAG 17 30365810 0.715907938 6 15 125 0.904761905 1.278753601 0.714285714 0.235294118 0.380952381 17 2 0 19 3R:30365777-30365817 7 17.5 3312 FBgn0010113 3260.306667 58.23333333 89.73 0.005367593 0.300515169 0.195029533 -7 -8 -7.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 30366074 30366079 + 3R_30366074_30366079_+ 0.999501285 0.999908772 0.999705029 0.000288146 hdc FBtr0330311 30360539 30372382 3R + 30366051 30366103 3'utr hdc FlyBase G47114.1 AATGTGTAATATATGTATACTTTGTACCTTTTTATGTTATACACAAGTCCCCA 79 30366081 0.903100435 10 75 978 0.970588235 1.995635195 0.098039216 0.227848101 0.401960784 79 3 0 99 3R:30366051-30366103 6 hdc FBtr0330311 30360539 30372382 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 30366045 30366095 3'utr hdc FlyBase G35544.1 ATTCGTAATGTGTAATATATGTATACTTTGTACCTTTTTATGTTATACACA 65 30366081 0.827728355 9 65 833 1 1.954242509 0.233333333 0.307692308 0.5 65 0 0 90 3R:30366045-30366095 6 71.5 3313 FBgn0010113 3260.306667 58.23333333 89.73 0.021930452 1.227819118 0.796834949 -7 -7 -7 0.15 dme-miR-283-5p 8mer-m1 TGATATTT 3R 30368998 30369005 + 3R_30368998_30369005_+ 0.486548527 0.449551455 0.468049991 0.02616083 hdc FBtr0330311 30360539 30372382 3R + 30368980 30369017 3'utr hdc FlyBase G47119.1 AAAGAGCTCCCCGATATGTGATATTTAATTGGTAATTG 14 30368994 0.800616335 4 14 110 1 1.230448921 0.058823529 0.214285714 0.352941176 14 0 0 17 3R:30368980-30369017 8 hdc FBtr0330311 30360539 30372382 TGATATTT 8mer-m1 dme-miR-283-5p 3R + 30368982 30369005 3'utr hdc FlyBase G35546.1 AGAGCTCCCCGATATGTGATATTT 5 30368994 0.81224685 2 5 35 1 0.84509804 0 0.4 0.571428571 5 0 0 7 3R:30368982-30369005 8 9.5 3314 FBgn0010113 3260.306667 58.23333333 89.73 0.002913836 0.163136806 0.105873175 4 4 4 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3R 30385761 30385767 - 3R_30385761_30385767_- 0.520175905 0.519846192 0.520011049 0.000233133 Fer1HCH FBtr0085635 30385571 30386297 3R - 30385639 30385793 3'utr Fer1HCH FlyBase G55884.2 ACGTCTGTTCTTTCTTATCAACCACTTGTGATTTCCGTACACCTCGGGAGGGGGCTCCACATTATGCAATCGCCGAGATTTCGCCTAGGCTTAAGTGGAATCGCTCATTCGCATAGTAAGACACTCAGCACAACCCATTCAATACATCCTATATC 411 30385761 0.830147327 27 377 2895 0.915662651 1.579783597 0.06626506 0.175182482 0.319277108 411 31 11 456 3R:30385639-30385793 7 Fer1HCH FBtr0085631|FBtr0085634|FBtr0306588|FBtr0085635|FBtr0085633|FBtr0085632 30385571|30385571|30385571|30385571|30385571|30385571 30385983|30385983|30385983|30386297|30385983|30385983 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 30385655 30385863 NoAnnotation G42166.1 AGCCAAGTCGGCGACTGGCCAATAAATTATCCGTTCGACTGCGATCCTCAAACCAGCACAGCAAAATTCCACGTCTGTTCTTTCTTATCAACCACTTGTGATTTCCGTACACCTCGGGAGGGGGCTCCACATTATGCAATCGCCGAGATTTCGCCTAGGCTTAAGTGGAATCGCTCATTCGCATAGTAAGACACTCAGCACAACCCATT 289 30385761 0.969122581 39 278 1979 0.968609865 2.334453751 0.047085202 0.401384083 0.612107623 289 13 1 432 3R:30385655-30385863 7 223.5 3315 FBgn0015222 3048.623333 308.1333333 465.1 0.073311779 0.725335353 0.480541819 -6 -6 -6 0.15 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 3R 30386109 30386115 - 3R_30386109_30386115_- 0.823349388 0.823345292 0.82334734 2.90E-06 Fer1HCH FBtr0085635 30385571 30386297 3R - 30386085 30386144 5'utr Fer1HCH FlyBase G55885.1 AGCCCTACAACCACTACCACCTGGTGGACTACCTGACCGGTGTCTATCTGGAGGAGCAGC 16 30386121 0.958667426 6 15 75 0.947368421 1.255272505 0 0.1875 0.315789474 16 1 0 18 3R:30386085-30386144 7 Fer1HCH FBtr0085635 30385571 30386297 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R - 30386073 30386148 5'utr Fer1HCH FlyBase G42167.1 AACAAGCCCTACAACCACTACCACCTGGTGGACTACCTGACCGGTGTCTATCTGGAGGAGCAGCTCCACGGACAGC 10 30386119 0.934152345 6 8 41 0.789473684 1.176091259 0 0.4 0.684210526 10 4 0 15 3R:30386073-30386148 7 11 3316 FBgn0015222 3048.623333 308.1333333 465.1 0.003608186 0.035698832 0.023650828 6 4 5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3R 30419200 30419206 - 3R_30419200_30419206_- 0.637587402 0.645109893 0.641348648 0.005319211 CG2217 FBtr0344524|FBtr0085630|FBtr0303200 30418765|30418765|30418765 30421490|30421490|30421490 3R - 30419188 30419218 5'utr CG2217 FlyBase G55894.1 ATTCTGCTGGCTTCTAGTCGCCGTTCTACTC 22 30419207 0.750455744 4 22 158 1 1.397940009 0.32 0.090909091 0.2 22 0 0 25 3R:30419188-30419218 7 CG2217 FBtr0085630|FBtr0303200|FBtr0344524 30418765|30418765|30418765 30421490|30421490|30421490 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3R - 30419186 30419218 5'utr CG2217 FlyBase G42172.1 ATTCTGCTGGCTTCTAGTCGCCGTTCTACTCTT 9 30419207 0.74128238 3 9 67 1 1.176091259 0.066666667 0.444444444 0.666666667 9 0 0 15 3R:30419186-30419218 7 15.5 3317 FBgn0027544 12.99 0.683333333 1.056666667 1.193225558 22.68292683 14.66876972 1 1 1 0.15 dme-miR-8-3p 6mer3-8 CAGTAT 3R 30425827 30425832 - 3R_30425827_30425832_- 0.937200081 0.99011147 0.963655775 0.03741401 CG2218 FBtr0085627|FBtr0339142 30425425|30425658 30426058|30426058 3R - 30425775 30425898 3'utr CG2218 FlyBase G55899.1 ATCGCAAAATCGCAGTTAAGCCAAATGTGTACACGCGCGAGTCCCTCCCGATTCGGCAGTATGTATCAGTATCAGGTCACGTTTAGTCATAGAGCAGATTACGGATTACCGATTAGCAATAGAG 56 30425833 0.854415691 15 54 354 0.969230769 1.498310554 0.153846154 0.107142857 0.230769231 56 1 1 63 3R:30425775-30425898 6 CG2218 FBtr0085627|FBtr0339142 30425425|30425658 30426058|30426058 CAGTAT 6mer3-8 dme-miR-8-3p 3R - 30425764 30425863 3'utr CG2218 FlyBase G42177.1 CGCGAGTCCCTCCCGATTCGGCAGTATGTATCAGTATCAGGTCACGTTTAGTCATAGAGCAGATTACGGATTACCGATTAGCAATAGAGAGTGCGCGCCT 28 30425833 0.981157855 8 23 172 0.833333333 1.544068044 0.166666667 0.392857143 0.595238095 28 7 0 35 3R:30425764-30425863 6 24 3318 FBgn0039767 282 15.08666667 22.94 0.085106383 1.590808661 1.046207498 1 1 1 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3R 30456795 30456801 - 3R_30456795_30456801_- 0.443126136 0.443130684 0.44312841 3.25E-06 CG2224 FBtr0331358 30456439 30457058 3R - 30456787 30456852 3'utr CG2224 FlyBase G55921.1 TTGCGTTCCGGCCTCTTGGTTCGTTGCATTCTTTCACTTAAGAACCTCTAATGTGATTTTCAATTG 37 30456795 0.826107322 10 37 283 1 1.73239376 0.111111111 0.378378378 0.574074074 37 0 0 54 3R:30456787-30456852 7 CG2224 FBtr0331358 30456439 30457058 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 30456765 30456857 3'utr CG2224 FlyBase G42194.1 GTTTATTGCGTTCCGGCCTCTTGGTTCGTTGCATTCTTTCACTTAAGAACCTCTAATGTGATTTTCAATTGTGGCTTACCCTTGCGTTCGTTA 31 30456795 0.98484663 13 29 239 0.875 1.243038049 0.15 0.225806452 0.4 31 4 1 35 3R:30456765-30456857 7 28.5 3319 FBgn0039773 322.3166667 18.33333333 28.13666667 0.088422359 1.554545455 1.012913162 -6 -6 -6 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 30786718 30786725 + 3R_30786718_30786725_+ 0.496781088 0.496072061 0.496426574 0.000501339 zfh1 FBtr0331180|FBtr0085701|FBtr0085702 30786658|30786202|30786202 30789202|30789202|30787177 3R + 30786690 30786765 3'utr zfh1 FlyBase G47224.1 AAGCCAGCCAAGCCAGCACTTACAGGCTGTACTTAAAAACCGACGAACAGAAAATCTCAAAATGTGCAGGAACACA 200 30786717 0.947028463 9 188 797 0.950207469 1.882714228 0.290456432 0.165 0.307053942 200 10 2 229 3R:30786690-30786765 8 zfh1 FBtr0331180|FBtr0085701|FBtr0085702 30786658|30786202|30786202 30789202|30789202|30787177 GTACTTAA 8mer-A1 dme-miR-252-5p 3R + 30786691 30786753 3'utr zfh1 FlyBase G35627.1 AGCCAGCCAAGCCAGCACTTACAGGCTGTACTTAAAAACCGACGAACAGAAAATCTCAAAATG 96 30786717 0.943372587 6 93 382 0.98540146 2.130333768 0.248175182 0.302083333 0.510948905 96 2 0 135 3R:30786691-30786753 8 137.5 3320 FBgn0004606 2785.276667 51.94333333 79.77333333 0.04936673 2.647115446 1.723633629 1 1 1 0.15 dme-miR-8-3p 6mer2-7 AGTATT 3R 30786939 30786944 + 3R_30786939_30786944_+ 0.999390087 0.999971427 0.999680757 0.000411041 zfh1 FBtr0331180|FBtr0085701|FBtr0085702 30786658|30786202|30786202 30789202|30789202|30787177 3R + 30786835 30787005 3'utr zfh1 FlyBase G47226.1 TTTTTTATAGCCATATAGACAGGGGAAATGTAAGAAGCCGTAGTTGAAAACCTTTCGTTTGAGCGAATTTATTATTTTTACAATGTTGCAACCACTTTGTTCTTAGTATTTTATTAGTTTAGCTTAACTTAGCTTACCGCCTAAGTTCGAGCGCAGGGCTGAATCATTTTG 139 30786937 0.929754304 33 134 1188 0.964497041 1.911157609 0.272189349 0.18705036 0.331360947 139 5 1 163 3R:30786835-30787005 6 zfh1 FBtr0331180|FBtr0085701|FBtr0085702 30786658|30786202|30786202 30789202|30789202|30787177 AGTATT 6mer2-7 dme-miR-8-3p 3R + 30786834 30787013 3'utr zfh1 FlyBase G35628.1 ATTTTTTATAGCCATATAGACAGGGGAAATGTAAGAAGCCGTAGTTGAAAACCTTTCGTTTGAGCGAATTTATTATTTTTACAATGTTGCAACCACTTTGTTCTTAGTATTTTATTAGTTTAGCTTAACTTAGCTTACCGCCTAAGTTCGAGCGCAGGGCTGAATCATTTTGTTTGGCCC 97 30786937 0.989411513 27 87 860 0.919708029 1.401400541 0.328467153 0.288659794 0.496350365 97 7 4 126 3R:30786834-30787013 6 61.5 3321 FBgn0004606 2785.276667 51.94333333 79.77333333 0.022080392 1.183982545 0.770934314 2 2 2 0.15 dme-miR-965-3p 7mer-m8 TACGCTT 3R 30787553 30787559 + 3R_30787553_30787559_+ 0.615396619 0.620203936 0.617800278 0.003399274 zfh1 FBtr0331180|FBtr0085701 30786658|30786202 30789202|30789202 3R + 30787527 30787647 3'utr zfh1 FlyBase G47231.1 AAGGAAAACCCCAGTCGTTCGCGAACTACGCTTTAAATTTAAACTTCTTCCCCACTAAGTCGCGAAATGAGCACAAAACACCTACAAGATCATTCCAATTTGGCCAGAGCCGCCGCGCCCC 79 30787559 0.982949211 14 76 360 0.969387755 1.977723605 0.040816327 0.164556962 0.326530612 79 3 0 95 3R:30787527-30787647 7 zfh1 FBtr0331180|FBtr0085701 30786658|30786202 30789202|30789202 TACGCTT 7mer-m8 dme-miR-965-3p 3R + 30787527 30787572 3'utr zfh1 FlyBase G35632.2 AAGGAAAACCCCAGTCGTTCGCGAACTACGCTTTAAATTTAAACTT 38 30787554 0.747952944 6 35 233 0.964912281 1.740362689 0.035087719 0.315789474 0.543859649 38 2 0 55 3R:30787527-30787572 7 35.5 3322 FBgn0004606 2785.276667 51.94333333 79.77333333 0.012745592 0.683437079 0.445010864 -6 -1 -3.5 0.15 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3R 30788299 30788305 + 3R_30788299_30788305_+ 0.629380903 0.66685003 0.648115466 0.026494655 zfh1 FBtr0331180|FBtr0331180|FBtr0085701|FBtr0085701 30786658|30786658|30786202|30786202 30789202|30789202|30789202|30789202 3R + 30788263 30788373 3'utr zfh1 FlyBase G47237.1 CGAGAGGAAGAAAAACTCACAAAAAAATGCATTTAATACTTAATTAGTTTTTATATTCTTGTATTTTAACGAGGAGGAGGCCGATCGGCGGCGATATATATATATATATAT 61 30788295 0.985373517 15 50 420 0.847222222 1.484299839 0.125 0.163934426 0.291666667 61 10 1 61 3R:30788263-30788373 7 zfh1 FBtr0331180|FBtr0331180|FBtr0085701|FBtr0085701 30786658|30786658|30786202|30786202 30789202|30789202|30789202|30789202 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3R + 30788272 30788346 3'utr zfh1 FlyBase G35635.1 GAAAAACTCACAAAAAAATGCATTTAATACTTAATTAGTTTTTATATTCTTGTATTTTAACGAGGAGGAGGCCGA 20 30788293 0.985168379 9 17 134 0.954545455 1.322219295 0 0.157894737 0.272727273 19 1 0 21 3R:30788272-30788346 7 21 3323 FBgn0004606 2785.276667 51.94333333 79.77333333 0.007539646 0.404286723 0.263245863 4 6 5 0.15 dme-miR-283-5p 7mer-m1 GATATTT 3R 30788675 30788681 + 3R_30788675_30788681_+ 0.735861643 0.751448775 0.743655209 0.011021815 zfh1 FBtr0331180|FBtr0085701 30786658|30786202 30789202|30789202 3R + 30788583 30788700 3'utr zfh1 FlyBase G47240.1 AAAAAAAAAAACCCTTAACAACAACAAAATGTTAACTTAAACACTAAAAGAAGAACTTATTTTTAAGCGCAAATACTATGTGGTTTGTGATGGATATTTGCACTCTAGGGCCTTATAT 16 30788679 0.988876104 13 15 123 0.941176471 0.903089987 0.176470588 0.0625 0.117647059 16 0 1 16 3R:30788583-30788700 7 zfh1 FBtr0331180|FBtr0085701 30786658|30786202 30789202|30789202 GATATTT 7mer-m1 dme-miR-283-5p 3R + 30788648 30788712 3'utr zfh1 FlyBase G35638.1 AGCGCAAATACTATGTGGTTTGTGATGGATATTTGCACTCTAGGGCCTTATATGAAATACACACT 6 30788681 0.984989414 5 6 42 1 1.041392685 0.181818182 0.666666667 0.818181818 6 0 0 11 3R:30788648-30788712 7 7 3324 FBgn0004606 2785.276667 51.94333333 79.77333333 0.002513215 0.134762241 0.087748621 -4 -6 -5 0.15 dme-miR-1003-3p 6mer3-8 ATGTGA 3R 30790164 30790169 - 3R_30790164_30790169_- 0.999996157 0.999963361 0.999979759 2.32E-05 wts FBtr0085720 30789623 30790974 3R - 30790118 30790192 3'utr wts FlyBase G55945.1 AAGAACAAACTTAGACGTAGCCTATGTGAAAAGCTAGCAATGTTAGACCAACTTGTTGAATGCCAAATGAAATTG 14 30790140 0.899057861 7 13 82 0.956521739 1.342422681 0.304347826 0.285714286 0.565217391 14 1 0 22 3R:30790118-30790192 6 wts FBtr0085720 30789623 30790974 ATGTGA 6mer3-8 dme-miR-1003-3p 3R - 30790117 30790192 3'utr wts FlyBase G42206.1 AAGAACAAACTTAGACGTAGCCTATGTGAAAAGCTAGCAATGTTAGACCAACTTGTTGAATGCCAAATGAAATTGT 14 30790168 0.919738153 7 14 63 1 1.301029996 0.2 0.357142857 0.55 14 0 0 20 3R:30790117-30790192 6 6 3325 FBgn0011739 1493.683333 31.27666667 48.31 0.004016916 0.1918363 0.124197889 -29 -1 -15 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 30826212 30826217 + 3R_30826212_30826217_+ 0.964060865 0.931523641 0.947792253 0.023007345 cindr FBtr0085706|FBtr0310068|FBtr0310072|FBtr0310070|FBtr0310071|FBtr0310424|FBtr0310069|FBtr0085705|FBtr0085704 30826044|30826044|30826044|30826044|30826044|30826044|30826044|30826044|30826044 30826550|30826559|30826550|30826550|30826550|30827005|30826550|30826550|30826559 3R + 30826128 30826239 3'utr cindr FlyBase G47268.1 AAGCGTAGAACGTAGTAGAGTAGAGACCGAACCCAAGACAATCCCAAATATCTGTACTCTGTGTTCTGTACTTATATACCAGAATGATCTATCCAAAACCACTAGCGATCAA 180 30826212 0.883386975 16 173 1111 0.965065502 2.043362278 0.056768559 0.244444444 0.406113537 180 7 1 221 3R:30826128-30826239 6 cindr FBtr0085704|FBtr0085705|FBtr0310069|FBtr0310424|FBtr0310071|FBtr0310070|FBtr0310072|FBtr0310068|FBtr0085706 30826044|30826044|30826044|30826044|30826044|30826044|30826044|30826044|30826044 30826559|30826550|30826550|30827005|30826550|30826550|30826550|30826559|30826550 TGATCT 6mer3-8 dme-bantam-3p 3R + 30826155 30826238 3'utr cindr FlyBase G35653.1 CGAACCCAAGACAATCCCAAATATCTGTACTCTGTGTTCTGTACTTATATACCAGAATGATCTATCCAAAACCACTAGCGATCA 105 30826212 0.968463506 11 102 603 0.967948718 2.178976947 0.038461538 0.352380952 0.564102564 105 5 0 151 3R:30826155-30826238 6 111.5 3326 FBgn0027598 4081.116667 128.2133333 195.6533333 0.027320954 0.869644343 0.569885512 0 0 0 0.15 dme-miR-283-5p 8mer-m1 TGATATTT 3R 31054978 31054985 - 3R_31054978_31054985_- 0.541031089 0.540056157 0.540543623 0.000689358 dco FBtr0334548 31054083 31056528 3R - 31054975 31055010 3'utr dco FlyBase G55989.1 AAAACTTAAATAAAAGTACATTACGTGATATTTCTT 9 31054990 0.983442932 4 9 74 1 1.079181246 0 0.333333333 0.5 9 0 0 12 3R:31054975-31055010 8 dco FBtr0334548 31054083 31056528 TGATATTT 8mer-m1 dme-miR-283-5p 3R - 31054972 31055003 3'utr dco FlyBase G42251.1 AAATAAAAGTACATTACGTGATATTTCTTACA 16 31054990 0.775267441 5 15 127 0.956521739 1.041392685 0.043478261 0.4375 0.608695652 16 0 1 22 3R:31054972-31055003 8 12.5 3327 FBgn0002413 1939.763333 65.62333333 100.4966667 0.006444085 0.190481028 0.124382235 5 5 5 0.15 dme-miR-277-3p 6mer3-8 TGCATT 3R 31055331 31055336 - 3R_31055331_31055336_- 0.983836824 0.999999997 0.991918411 0.011429108 dco FBtr0085743|FBtr0085742|FBtr0085744|FBtr0334548 31055184|31055184|31055184|31054083 31056528|31056528|31056528|31056528 3R - 31055321 31055371 3'utr dco FlyBase G55991.1 ATATAAATTGCGTTAGACATACACAACAAAACAATTGCATTAACGTTTCGA 7 31055337 0.863259506 4 7 39 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 3R:31055321-31055371 6 dco FBtr0085744|FBtr0334548|FBtr0085743|FBtr0085742 31055184|31054083|31055184|31055184 31056528|31056528|31056528|31056528 TGCATT 6mer3-8 dme-miR-277-3p 3R - 31055280 31055364 3'utr dco FlyBase G42252.1 TTGCGTTAGACATACACAACAAAACAATTGCATTAACGTTTCGATTTAACAATGTAAGTAATGGCCCTGCGGAGGAAAGTTACAC 10 31055336 0.945193932 7 10 48 1 1.146128036 0.214285714 0.3 0.5 10 0 0 14 3R:31055280-31055364 6 4 3328 FBgn0002413 1939.763333 65.62333333 100.4966667 0.002062107 0.060953929 0.039802315 1 0 0.5 0.15 dme-miR-317-3p 8mer-A1 TGTGTTCA 3R 31055508 31055515 - 3R_31055508_31055515_- 0.631136783 0.631136777 0.63113678 0 dco FBtr0085743|FBtr0085742|FBtr0085744|FBtr0334548 31055184|31055184|31055184|31054083 31056528|31056528|31056528|31056528 3R - 31055502 31055540 3'utr dco FlyBase G55992.1 CTTTCGTGGTCTGCACTTTGCTGCCTGTGTTCATATATA 6 31055524 0.981246061 4 4 44 0.875 0.84509804 0.125 0.166666667 0.375 6 1 0 7 3R:31055502-31055540 8 dco FBtr0085744|FBtr0334548|FBtr0085743|FBtr0085742 31055184|31054083|31055184|31055184 31056528|31056528|31056528|31056528 TGTGTTCA 8mer-A1 dme-miR-317-3p 3R - 31055505 31055541 3'utr dco FlyBase G42254.1 ACTTTCGTGGTCTGCACTTTGCTGCCTGTGTTCATAT 7 31055525 0.755162635 4 5 55 0.75 0.77815125 0 0.142857143 0.25 7 2 0 6 3R:31055505-31055541 8 3.5 3329 FBgn0002413 1939.763333 65.62333333 100.4966667 0.001804344 0.053334688 0.034827026 9 10 9.5 0.15 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 31055692 31055699 - 3R_31055692_31055699_- 0.625332045 0.625364009 0.625348027 2.26E-05 dco FBtr0085743|FBtr0085742|FBtr0085744|FBtr0334548 31055184|31055184|31055184|31054083 31056528|31056528|31056528|31056528 3R - 31055624 31055748 3'utr dco FlyBase G55993.1 GTAACCTAAGTTGATGGTAAAATGATTGCGATTACCACGTGCAGTTCTCTAGCTTTAAGCAACGCTCTGACTTATAAGGCCCTCCTATGTTATATTATGTAACCTTCTGTACCGCCTACTCCCCT 59 31055709 0.90956727 18 53 479 0.910447761 1.30820858 0.313432836 0.101694915 0.208955224 59 4 2 61 3R:31055624-31055748 8 dco FBtr0085744|FBtr0334548|FBtr0085743|FBtr0085742 31055184|31054083|31055184|31055184 31056528|31056528|31056528|31056528 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R - 31055658 31055813 3'utr dco FlyBase G42255.1 AGGCTCTAGCTCTAGCGAATCCAATCCATACAAAAGCATATGCCACACAGCAAGGCACCCACATTGTAACCTAAGTTGATGGTAAAATGATTGCGATTACCACGTGCAGTTCTCTAGCTTTAAGCAACGCTCTGACTTATAAGGCCCTCCTATGTT 35 31055709 0.981664305 15 32 233 0.964285714 1.255272505 0.285714286 0.485714286 0.678571429 35 0 2 54 3R:31055658-31055813 8 32 3330 FBgn0002413 1939.763333 65.62333333 100.4966667 0.016496858 0.487631432 0.318418521 10 10 10 0.15 dme-miR-14-3p 6mer2-7 AGACTG 3R 31228017 31228022 + 3R_31228017_31228022_+ 0.999999704 0.999999964 0.999999834 2.12E-07 CG12054 FBtr0085758 31227841 31228491 3R + 31227902 31228062 3'utr CG12054 FlyBase G47283.1 AAATTGACCAGCTTGTCCGTATACGAAAGACATTCTAGACTCGACAGAATGCCGATCTTCTTGGGGGCAGTCCAGCCCACTCACTCACCAAAACACACATTTGGAAACATTTCGTAGACTGCTTACTTGTTCTTAGTTTAGACTTCGAGTCCAATCAATTG 130 31228016 0.984629081 24 125 993 0.968944099 2.193124598 0.099378882 0.2 0.354037267 130 5 0 156 3R:31227902-31228062 6 CG12054 FBtr0085758 31227841 31228491 AGACTG 6mer2-7 dme-miR-14-3p 3R + 31227992 31228058 3'utr CG12054 FlyBase G35667.1 AAACACACATTTGGAAACATTTCGTAGACTGCTTACTTGTTCTTAGTTTAGACTTCGAGTCCAATCA 74 31228015 0.919267044 14 68 579 0.923076923 2.033423755 0.025641026 0.445945946 0.64957265 74 9 0 108 3R:31227992-31228058 6 81.5 3331 FBgn0039831 3333.656667 103.7033333 158.5733333 0.024447629 0.785895664 0.51395779 1 2 1.5 0.15 dme-bantam-3p 7mer-m8 TGATCTC 3R 31228214 31228220 + 3R_31228214_31228220_+ 0.661511738 0.661537729 0.661524734 1.84E-05 CG12054 FBtr0085758 31227841 31228491 3R + 31228160 31228245 3'utr CG12054 FlyBase G47285.1 ATTCATCGATTGTATGTATGACTTTCATGCTTGTATTAAACTATTTACAACTGCTGATCTCCTCTTAATTTAATTAGGCTATGCAA 340 31228213 0.828338802 19 323 3019 0.955916473 1.836745966 0.011600928 0.217647059 0.382830626 340 14 5 412 3R:31228160-31228245 7 CG12054 FBtr0085758 31227841 31228491 TGATCTC 7mer-m8 dme-bantam-3p 3R + 31228156 31228245 3'utr CG12054 FlyBase G35668.1 ATTTATTCATCGATTGTATGTATGACTTTCATGCTTGTATTAAACTATTTACAACTGCTGATCTCCTCTTAATTTAATTAGGCTATGCAA 215 31228212 0.83012683 19 196 1897 0.912052117 1.84509804 0.016286645 0.339534884 0.537459283 215 24 3 280 3R:31228156-31228245 7 253.5 3332 FBgn0039831 3333.656667 103.7033333 158.5733333 0.076042624 2.444473016 1.598629446 1 2 1.5 0.15 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 31229157 31229163 + 3R_31229157_31229163_+ 0.818136269 0.816791407 0.817463838 0.000950988 CG12054 FBtr0335408|FBtr0113312|FBtr0335409 31229123|31229123|31229123 31231259|31229387|31229387 3R + 31229132 31229188 3'utr CG12054 FlyBase G47288.1 ATCGGATGAGAAGGCAAGAGAGTTGGCTGTGATGAAGTAGTAACTAACTGACTAACA 385 31229155 0.780017737 10 378 2042 0.977375566 1.857332496 0.332579186 0.124675325 0.237556561 385 5 5 432 3R:31229132-31229188 7 CG12054 FBtr0335409|FBtr0113312|FBtr0335408 31229123|31229123|31229123 31229387|31229387|31231259 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R + 31229127 31229245 3'utr CG12054 FlyBase G35673.1 GGCATATCGGATGAGAAGGCAAGAGAGTTGGCTGTGATGAAGTAGTAACTAACTGACTAACAAACCTGACAAGAGGCGGAGAAAGAGGATTCGTCAATAAGGCAGATGGGAAAAGGATG 345 31229155 0.837597036 10 336 1742 0.974854932 2.225309282 0.353965184 0.344927536 0.562862669 345 11 2 504 3R:31229127-31229245 7 358.5 3333 FBgn0039831 3333.656667 103.7033333 158.5733333 0.107539569 3.456976632 2.260783654 2 2 2 0.15 dme-miR-79-3p 7mer-A1 AGCTTTA 3R 31229533 31229539 + 3R_31229533_31229539_+ 0.663997731 0.671277343 0.667637537 0.005147455 CG12054 FBtr0335408 31229123 31231259 3R + 31229475 31229554 3'utr CG12054 FlyBase G47292.1 ATTAAACCTAATCTCAAACATATTTAAGCTGGCCTGCTTAGAAAAGCTTCTCTAAAACAGCTTTAGATAATTTTAAAATT 13 31229537 0.957037685 6 13 90 1 1.146128036 0.214285714 0.076923077 0.142857143 13 0 0 14 3R:31229475-31229554 7 CG12054 FBtr0335408 31229123 31231259 AGCTTTA 7mer-A1 dme-miR-79-3p 3R + 31229488 31229547 3'utr CG12054 FlyBase G35676.1 TCAAACATATTTAAGCTGGCCTGCTTAGAAAAGCTTCTCTAAAACAGCTTTAGATAATTT 10 31229537 0.807593151 5 8 74 0.75 0.954242509 0.333333333 0.2 0.333333333 10 3 0 9 3R:31229488-31229547 7 5.5 3334 FBgn0039831 3333.656667 103.7033333 158.5733333 0.00164984 0.053035904 0.034684268 -4 -4 -4 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3R 31229651 31229657 + 3R_31229651_31229657_+ 0.793560749 0.798744991 0.79615287 0.003665854 CG12054 FBtr0335408 31229123 31231259 3R + 31229608 31229678 3'utr CG12054 FlyBase G47293.1 AGCGACAACATTTTAGTAAATACATTTGGAGAATTTTCTTCAACTAGTCATTATTGTAGTTAAATTAAATT 91 31229633 0.770142959 16 89 930 0.980392157 2 0.078431373 0.10989011 0.205882353 91 2 0 100 3R:31229608-31229678 7 CG12054 FBtr0335408 31229123 31231259 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 31229592 31229678 3'utr CG12054 FlyBase G35677.1 AAAAATTAATTATACAAGCGACAACATTTTAGTAAATACATTTGGAGAATTTTCTTCAACTAGTCATTATTGTAGTTAAATTAAATT 44 31229659 0.989950037 15 44 435 1 1.819543936 0.075757576 0.454545455 0.636363636 44 0 0 66 3R:31229592-31229678 7 38.5 3335 FBgn0039831 3333.656667 103.7033333 158.5733333 0.01154888 0.371251326 0.242789876 18 -8 5 0.15 dme-miR-305-5p 7mer-m1 GTACAAT 3R 31229775 31229781 + 3R_31229775_31229781_+ 0.765586663 0.764959683 0.765273173 0.000443356 CG12054 FBtr0335408 31229123 31231259 3R + 31229701 31229835 3'utr CG12054 FlyBase G47294.1 ACATAACTTTCTAACCTACTGGTTGGTGGAATTCCCGAACCCTATATTTATAACTTAAGAAACCTCTATCCTGTGTACAATTTCAATGAAATCTTAGTGAAGGGTCTTTCCCCAATCAGTTGTTTGCGTCATTTT 50 31229795 0.987434289 19 44 404 0.901639344 1.439332694 0.37704918 0.18 0.327868852 50 5 1 55 3R:31229701-31229835 7 CG12054 FBtr0335408 31229123 31231259 GTACAAT 7mer-m1 dme-miR-305-5p 3R + 31229759 31229822 3'utr CG12054 FlyBase G35679.1 GAAACCTCTATCCTGTGTACAATTTCAATGAAATCTTAGTGAAGGGTCTTTCCCCAATCAGTTG 22 31229794 0.668951611 8 19 170 0.838709677 1.414973348 0.483870968 0.318181818 0.516129032 22 5 0 26 3R:31229759-31229822 7 19.5 3336 FBgn0039831 3333.656667 103.7033333 158.5733333 0.005849433 0.188036386 0.122971496 -20 -19 -19.5 0.15 dme-miR-1008-3p 7mer-m8 AGCTGTG 3R 31230131 31230137 + 3R_31230131_31230137_+ 0.629636253 0.593333748 0.611485001 0.025669815 CG12054 FBtr0335408 31229123 31231259 3R + 31230108 31230153 3'utr CG12054 FlyBase G47298.1 TATAGAGCAGAGCATGCATCTGTAGCTGTGTGAGTGTTTGTCCGTG 45 31230138 0.663285063 7 43 337 0.964285714 1.431363764 0.482142857 0.2 0.357142857 45 1 1 54 3R:31230108-31230153 7 CG12054 FBtr0335408 31229123 31231259 AGCTGTG 7mer-m8 dme-miR-1008-3p 3R + 31230110 31230153 3'utr CG12054 FlyBase G35681.1 TAGAGCAGAGCATGCATCTGTAGCTGTGTGAGTGTTTGTCCGTG 31 31230138 0.742704348 7 31 209 1 1.662757832 0.608695652 0.322580645 0.543478261 31 0 0 46 3R:31230110-31230153 7 38 3337 FBgn0039831 3333.656667 103.7033333 158.5733333 0.011398894 0.36642988 0.239636761 -7 -7 -7 0.15 dme-miR-14-3p 7mer-m8 AAGACTG 3R 31230801 31230807 + 3R_31230801_31230807_+ 0.671781386 0.671748677 0.671765032 2.31E-05 CG12054 FBtr0335408 31229123 31231259 3R + 31230775 31230831 3'utr CG12054 FlyBase G47303.1 AATAAAATGAGTATGTCATCTTATATAAGACTGCTGTTATGTTCGTAAATATATTTA 90 31230799 0.703281641 9 84 844 0.904761905 1.977723605 0.142857143 0.144444444 0.266666667 90 10 0 95 3R:31230775-31230831 7 CG12054 FBtr0335408 31229123 31231259 AAGACTG 7mer-m8 dme-miR-14-3p 3R + 31230777 31230830 3'utr CG12054 FlyBase G35684.1 TAAAATGAGTATGTCATCTTATATAAGACTGCTGTTATGTTCGTAAATATATTT 75 31230799 0.701161977 9 61 664 0.836538462 1.939519253 0.115384615 0.293333333 0.490384615 75 17 0 87 3R:31230777-31230830 7 80 3338 FBgn0039831 3333.656667 103.7033333 158.5733333 0.023997672 0.771431327 0.504498444 2 2 2 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 31231220 31231225 + 3R_31231220_31231225_+ 0.465049224 0.670468916 0.56775907 0.145253663 CG12054 FBtr0335408|FBtr0335408|FBtr0335408 31229123|31229123|31229123 31231259|31231259|31231259 3R + 31231202 31231239 3'utr CG12054 FlyBase G47305.1 TATTCTCTTTTTGCTTTATGTGATCTATTACATACTAC 23 31231221 0.684373941 7 22 271 0.965517241 1.146128036 0 0.173913043 0.344827586 23 0 1 28 3R:31231202-31231239 6 CG12054 FBtr0335408|FBtr0335408|FBtr0335408 31229123|31229123|31229123 31231259|31231259|31231259 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 31231192 31231239 3'utr CG12054 FlyBase G35686.1 AGTAGTAAAATATTCTCTTTTTGCTTTATGTGATCTATTACATACTAC 14 31231218 0.899099265 10 13 160 0.958333333 1.361727836 0 0.5 0.708333333 14 1 0 23 3R:31231192-31231239 6 17.5 3339 FBgn0039831 3333.656667 103.7033333 158.5733333 0.005249491 0.168750603 0.110359035 -1 2 0.5 0.15 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3R 31256475 31256480 + 3R_31256475_31256480_+ 0.576227433 0.561865298 0.569046366 0.010155538 spn-F FBtr0085760 31256404 31256659 3R + 31256423 31256519 stop_codon spn-F FlyBase G47315.1 TTTCGCCACCGAACTCTGACCTGACCGGAGAAATCCAAGGATTAAGGAGCAGTTTGACTGCGCAGGAGCCGCTTGTTACGTTTCTATTGATAAGACG 41 31256476 0.826600605 10 36 165 0.928571429 1.591064607 0.214285714 0.024390244 0.047619048 41 3 0 39 3R:31256423-31256519 6 spn-F FBtr0085760|FBtr0330079 31256404|31256440 31256659|31256659 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3R + 31256466 31256557 3'utr spn-F FlyBase G35690.1 AAGGAGCAGTTTGACTGCGCAGGAGCCGCTTGTTACGTTTCTATTGATAAGACGTTAGGGCGATCATGTATCAAAACTATACAACATTGAAC 17 31256475 0.971174007 7 16 94 0.962962963 1.414973348 0.259259259 0.294117647 0.555555556 17 1 0 26 3R:31256466-31256557 6 15 3340 FBgn0086362 186.31 15.49 23.55333333 0.080510976 0.968366688 0.636852533 -1 0 -0.5 0.15 dme-miR-1002-5p 8mer-A1 CTACTTAA 3R 31401470 31401477 + 3R_31401470_31401477_+ 0.618225306 0.622939333 0.620582319 0.003333301 Gcn2 FBtr0334552|FBtr0085787|FBtr0334551 31401376|31401376|31401376 31401560|31402013|31401560 3R + 31401416 31401501 3'utr Gcn2 FlyBase G47330.1 AGACCAGCCAGTAGTGTAAGCTCGAAAGTGTCACAAATTATTTTCGCCGAAATTCTACTTAACTGGCTGCCCTCCGTGCCATTAAC 11 31401487 0.945997837 8 11 66 1 1.113943352 0.076923077 0.090909091 0.230769231 11 0 0 13 3R:31401416-31401501 8 Gcn2 FBtr0334552|FBtr0085787|FBtr0334551 31401376|31401376|31401376 31401560|31402013|31401560 CTACTTAA 8mer-A1 dme-miR-1002-5p 3R + 31401458 31401496 3'utr Gcn2 FlyBase G35701.1 TTCGCCGAAATTCTACTTAACTGGCTGCCCTCCGTGCCA 8 31401468 0.953398027 5 6 50 0.642857143 0.954242509 0.285714286 0.625 0.785714286 8 5 0 9 3R:31401458-31401496 8 7 3341 FBgn0019990 1106.633333 23.54666667 35.94666667 0.006325492 0.297281993 0.194732938 -17 2 -7.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 31401608 31401613 + 3R_31401608_31401613_+ 0.999999782 0.99985478 0.999927281 0.00010253 Gcn2 FBtr0085787 31401376 31402013 3R + 31401594 31401629 3'utr Gcn2 FlyBase G47331.1 TTATTGAATGCCTTTCTAGTGGAAGCTCTCATTCAT 18 31401607 0.614506343 5 16 143 0.904761905 1.278753601 0.19047619 0.111111111 0.238095238 18 2 0 19 3R:31401594-31401629 6 Gcn2 FBtr0085787 31401376 31402013 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 31401596 31401626 3'utr Gcn2 FlyBase G35702.1 ATTGAATGCCTTTCTAGTGGAAGCTCTCATT 7 31401607 0.662043147 2 7 52 1 1.079181246 0.25 0.571428571 0.75 7 0 0 12 3R:31401596-31401626 6 12.5 3342 FBgn0019990 1106.633333 23.54666667 35.94666667 0.011295521 0.530860702 0.347737389 1 1 1 0.15 dme-miR-282-5p 8mer-A1 AGAGGCTA 3R 31401801 31401808 + 3R_31401801_31401808_+ 0.637351167 0.637725304 0.637538235 0.000264529 Gcn2 FBtr0085787 31401376 31402013 3R + 31401783 31401829 3'utr Gcn2 FlyBase G47332.1 TCGAAATTAAAGTTAAGTAGAGGCTAATATTTTCAGAGAAAATTCTT 48 31401800 0.893086411 7 46 326 0.949152542 1.271066772 0.084745763 0.229166667 0.372881356 48 1 2 56 3R:31401783-31401829 8 Gcn2 FBtr0085787 31401376 31402013 AGAGGCTA 8mer-A1 dme-miR-282-5p 3R + 31401783 31401821 3'utr Gcn2 FlyBase G35704.1 TCGAAATTAAAGTTAAGTAGAGGCTAATATTTTCAGAGA 35 31401800 0.870531403 5 34 228 0.979166667 1.672097858 0 0.285714286 0.479166667 35 1 0 47 3R:31401783-31401821 8 41.5 3343 FBgn0019990 1106.633333 23.54666667 35.94666667 0.03750113 1.762457531 1.154488131 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 31456999 31457004 + 3R_31456999_31457004_+ 0.988226949 0.974152665 0.981189807 0.009951962 Gprk2 FBtr0085788|FBtr0085788|FBtr0085788 31456465|31456465|31456465 31457873|31457873|31457873 3R + 31456983 31457098 3'utr Gprk2 FlyBase G47360.1 TTTTTGTATAGTAGTTTGTGATCGACGGGACAGCGTTGGACGATAGATGTTCTAGTTAGCATTTGTAAGTTAAGAAAATGACATGAATACTCGAAAACTTGAATGCATTTTTAACA 66 31456998 0.719675097 21 59 480 0.898734177 1.851258349 0.341772152 0.181818182 0.316455696 66 8 0 71 3R:31456983-31457098 6 Gprk2 FBtr0085788|FBtr0085788|FBtr0085788 31456465|31456465|31456465 31457873|31457873|31457873 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 31456950 31457059 3'utr Gprk2 FlyBase G35733.1 ACAGCACTACGTAGACGGCTGAGTAATATGTAATTTTTGTATAGTAGTTTGTGATCGACGGGACAGCGTTGGACGATAGATGTTCTAGTTAGCATTTGTAAGTTAAGAAA 52 31456998 0.98585672 11 45 372 0.879518072 1.562292864 0.481927711 0.5 0.686746988 52 9 1 73 3R:31456950-31457059 6 35 3344 FBgn0261988 1488.626667 40.02 61.47666667 0.023511604 0.874562719 0.569321694 1 1 1 0.15 dme-miR-1006-3p 7mer-A1 GAATTTA 3R 31457481 31457487 + 3R_31457481_31457487_+ 0.820672952 0.823349562 0.822011257 0.001892642 Gprk2 FBtr0085788 31456465 31457873 3R + 31457453 31457512 3'utr Gprk2 FlyBase G47364.1 AGAAAGAAACAAAAGTAAACCAATTGGAGAATTTATTATGTTAGTATGAAAATTAATTAT 10 31457476 0.989455083 6 10 92 1 1.041392685 0.363636364 0.1 0.181818182 10 0 0 11 3R:31457453-31457512 7 Gprk2 FBtr0085788 31456465 31457873 GAATTTA 7mer-A1 dme-miR-1006-3p 3R + 31457452 31457500 3'utr Gprk2 FlyBase G35738.1 AAGAAAGAAACAAAAGTAAACCAATTGGAGAATTTATTATGTTAGTATG 7 31457484 0.98631948 4 6 47 0.909090909 1 0.363636364 0.285714286 0.545454545 7 1 0 10 3R:31457452-31457500 7 7.5 3345 FBgn0261988 1488.626667 40.02 61.47666667 0.005038201 0.187406297 0.121997506 5 -3 1 0.15 dme-miR-1003-3p 8mer-A1 ATGTGAGA 3R 31575989 31575996 - 3R_31575989_31575996_- 0.643433739 0.643365823 0.643399781 4.80E-05 pygo FBtr0085806 31575833 31576891 3R - 31575922 31576012 3'utr pygo FlyBase G56037.1 AAGAAATTATGAATTCATGTGAGAAAGGTTAATTTGTAATTTAAGACGAATGTGGAGGACGCAGCGAACATAAACGATTCAAACGAGAAAA 25 31575999 0.951748212 6 22 141 0.888888889 1.380211242 0.37037037 0.08 0.148148148 25 3 0 24 3R:31575922-31576012 8 pygo FBtr0085806 31575833 31576891 ATGTGAGA 8mer-A1 dme-miR-1003-3p 3R - 31575942 31576012 3'utr pygo FlyBase G42287.1 AAGAAATTATGAATTCATGTGAGAAAGGTTAATTTGTAATTTAAGACGAATGTGGAGGACGCAGCGAACAT 13 31575999 0.973276884 3 13 84 1 1.278753601 0.263157895 0.384615385 0.578947368 13 0 0 19 3R:31575942-31576012 8 14.5 3346 FBgn0043900 862.0266667 23.10666667 35.35666667 0.016820825 0.627524524 0.410106533 3 3 3 0.15 dme-miR-980-3p 8mer-A1 GGCAGCTA 3R 31576686 31576693 - 3R_31576686_31576693_- 0.668733358 0.66863245 0.668682904 7.14E-05 pygo FBtr0085806 31575833 31576891 3R - 31576661 31576713 3'utr pygo FlyBase G56043.1 GACCCACCAGTCCCCATCCCGGCAGCTAAGCCCCGTAGCCAGAATGCGAACCA 16 31576698 0.835690792 5 16 35 1 1.230448921 0.058823529 0.0625 0.117647059 16 0 0 17 3R:31576661-31576713 8 pygo FBtr0085806 31575833 31576891 GGCAGCTA 8mer-A1 dme-miR-980-3p 3R - 31576672 31576709 3'utr pygo FlyBase G42290.1 CACCAGTCCCCATCCCGGCAGCTAAGCCCCGTAGCCAG 7 31576698 0.733471962 2 5 19 0.666666667 0.77815125 0 0.285714286 0.444444444 7 3 0 6 3R:31576672-31576709 8 11.5 3347 FBgn0043900 862.0266667 23.10666667 35.35666667 0.013340655 0.497691864 0.325256906 5 5 5 0.15 dme-miR-1007-3p 8mer-A1 TGAGCTTA 3R 31596910 31596917 - 3R_31596910_31596917_- 0.62534786 0.625346931 0.625347395 7.07E-07 CycG FBtr0333328 31596640 31599272 3R - 31596869 31597076 3'utr CycG FlyBase G56057.2 ATTTTACATTGTATTTAGCGCGGAGTTAGTTAAATATTTGCAAGTATCAACATCAAAAACATGAATGAAAATCTCAATTATTGTATATTTAGTTTTTATTTGACGACTACTTTTATTCATGATAACAATGATGGTGGGCAATTGCCCATCGTCAAGTTTTGAGCTTATATTCGGTTGAGGTTTACACTTTAGGATTAGTTACCACACG 224 31596917 0.867040235 34 214 2256 0.957198444 2.390935107 0.089494163 0.133928571 0.245136187 224 11 0 246 3R:31596869-31597076 8 CycG FBtr0333328 31596640 31599272 TGAGCTTA 8mer-A1 dme-miR-1007-3p 3R - 31596874 31597077 3'utr CycG FlyBase G42303.1 AATTTTACATTGTATTTAGCGCGGAGTTAGTTAAATATTTGCAAGTATCAACATCAAAAACATGAATGAAAATCTCAATTATTGTATATTTAGTTTTTATTTGACGACTACTTTTATTCATGATAACAATGATGGTGGGCAATTGCCCATCGTCAAGTTTTGAGCTTATATTCGGTTGAGGTTTACACTTTAGGATTAGTTACC 133 31596917 0.779429794 29 131 1301 0.974619289 2.283301229 0.121827411 0.368421053 0.573604061 133 5 0 192 3R:31596874-31597077 8 111 3348 FBgn0039858 20619.65667 595.7166667 909.0766667 0.005383213 0.186330191 0.122101913 0 0 0 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 31597223 31597229 - 3R_31597223_31597229_- 0.661335671 0.661539798 0.661437734 0.00014432 CycG FBtr0333328 31596640 31599272 3R - 31597130 31597277 3'utr CycG FlyBase G56058.1 AGTCGAAATGCGAAACAAATAATTATATTTAAGCGACGGAGATCATCATGTGTTCGTTTAAGCTTAGTCCACTATAAATAACAGCCAATTGACGATTAGGCGATTAAGAGAAAGGTGAAAGCGGTGAAAATATGTCTAGCACTAAGTT 195 31597229 0.987348193 21 182 1601 0.944700461 1.533602611 0.235023041 0.112820513 0.202764977 195 7 5 205 3R:31597130-31597277 7 CycG FBtr0333328 31596640 31599272 TGTGTTC 7mer-m8 dme-miR-317-3p 3R - 31597127 31597351 3'utr CycG FlyBase G42304.1 CTGAACCACAGCCTGAAGATCAGTTCTGTGAAAGCTGTGAGTGAGAAAGCAGAATCCGAATACATTGTTAACACAGTCGAAATGCGAAACAAATAATTATATTTAAGCGACGGAGATCATCATGTGTTCGTTTAAGCTTAGTCCACTATAAATAACAGCCAATTGACGATTAGGCGATTAAGAGAAAGGTGAAAGCGGTGAAAATATGTCTAGCACTAAGTTTTT 154 31597229 0.975900291 31 143 1078 0.931914894 1.437354128 0.170212766 0.402597403 0.608510638 154 9 7 219 3R:31597127-31597351 7 121 3349 FBgn0039858 20619.65667 595.7166667 909.0766667 0.005868187 0.203116694 0.133102085 0 0 0 0.15 dme-miR-980-3p 6mer3-8 GGCAGC 3R 31597661 31597666 - 3R_31597661_31597666_- 0.999558179 0.999556199 0.999557189 1.41E-06 CycG FBtr0333328 31596640 31599272 3R - 31597639 31597692 3'utr CycG FlyBase G56061.1 CAGAAAACTTTTATTTAAATCCACTTGGCAGCGGAATGTGCAAACTCCTGTCTG 102 31597667 0.834565582 5 97 515 0.976190476 2.089905111 0.03968254 0.176470588 0.333333333 102 3 0 123 3R:31597639-31597692 6 CycG FBtr0333328 31596640 31599272 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 31597599 31597688 3'utr CycG FlyBase G42306.1 AAACTTTTATTTAAATCCACTTGGCAGCGGAATGTGCAAACTCCTGTCTGTAAATTTGAATAAAATGCGTTTGCCCCGCCAAAGGGGCAT 90 31597667 0.949070601 6 88 402 0.993055556 1.854306042 0.020833333 0.444444444 0.652777778 90 0 1 143 3R:31597599-31597688 6 90.5 3350 FBgn0039858 20619.65667 595.7166667 909.0766667 0.004389016 0.151917858 0.09955156 1 1 1 0.15 dme-miR-1012-3p 8mer-A1 TTGACTAA 3R 31598272 31598279 - 3R_31598272_31598279_- 0.626902786 0.626949126 0.626925956 3.27E-05 CycG FBtr0333328 31596640 31599272 3R - 31598186 31598309 3'utr CycG FlyBase G56063.1 AGAAAACTAAAGTATAATTCGCCGCCTGTATTGACTAAGAACTCTTAACAATAATATAATAACTTTAAACAAGGTACAATATGTAGTGTGTGTCTAGTAGATTTTTCTCTGTATAACAAAATCA 40 31598282 0.980977245 13 37 274 0.942307692 1.69019608 0.057692308 0.25 0.423076923 40 3 0 49 3R:31598186-31598309 8 CycG FBtr0333328 31596640 31599272 TTGACTAA 8mer-A1 dme-miR-1012-3p 3R - 31598253 31598323 3'utr CycG FlyBase G42309.1 ACGAGAAAGCCCATAGAAAACTAAAGTATAATTCGCCGCCTGTATTGACTAAGAACTCTTAACAATAATAT 35 31598282 0.999737317 10 32 186 0.941176471 1.681241237 0.098039216 0.382352941 0.588235294 34 3 0 48 3R:31598253-31598323 8 21.5 3351 FBgn0039858 20619.65667 595.7166667 909.0766667 0.001042694 0.036090983 0.023650371 3 3 3 0.15 dme-miR-304-5p 6mer3-8 TGAGAT 3R 31598933 31598938 - 3R_31598933_31598938_- 0.914992036 0.959659782 0.937325909 0.031584904 CycG FBtr0085800|FBtr0085802|FBtr0085799|FBtr0085803|FBtr0333328 31598801|31598801|31598801|31598801|31596640 31599272|31599272|31599272|31599272|31599272 3R - 31598896 31598980 3'utr CycG FlyBase G56068.1 GTGTATTTGGTAGCGCGCTGGTTCTAACATTTAAGAAACTATTGAGATACGGAAATGTGGGCGCCAAGGTGACGCAGCCACGCCC 45 31598939 0.962937978 7 40 205 0.892857143 0.920818754 0.089285714 0.222222222 0.375 45 1 5 50 3R:31598896-31598980 6 CycG FBtr0333328|FBtr0085800|FBtr0085802|FBtr0085799|FBtr0085803 31596640|31598801|31598801|31598801|31598801 31599272|31599272|31599272|31599272|31599272 TGAGAT 6mer3-8 dme-miR-304-5p 3R - 31598903 31598983 3'utr CycG FlyBase G42312.1 AATGTGTATTTGGTAGCGCGCTGGTTCTAACATTTAAGAAACTATTGAGATACGGAAATGTGGGCGCCAAGGTGACGCAGC 33 31598939 0.956035112 8 33 156 1 1.612783857 0.097560976 0.181818182 0.341463415 33 0 0 41 3R:31598903-31598983 6 33.5 3352 FBgn0039858 20619.65667 595.7166667 909.0766667 0.001624663 0.056234787 0.036850577 1 1 1 0.15 dme-miR-980-3p 8mer-A1 GGCAGCTA 3R 31614950 31614957 + 3R_31614950_31614957_+ 0.66730181 0.666587457 0.666944633 0.000505086 Med FBtr0085815|FBtr0085816|FBtr0337030 31614900|31614900|31614900 31615200|31615200|31615375 3R + 31614865 31614990 stop_codon Med FlyBase G47426.1 CGCCATGCCGATCGATGGCCCGCGTGCCGCCGCCTAATCCGTATTTATTATTGGCCCACATCTATGCTAAGGACTCAGTTTTAGCGGCAGCTATCCGTCAGCTATTTGCGGATTTTGTGTTTTTCA 52 31614945 0.986976867 22 47 404 0.901639344 1.263241435 0.31147541 0.173076923 0.295081967 52 4 2 55 3R:31614865-31614990 8 Med FBtr0337030|FBtr0085815|FBtr0085816 31614900|31614900|31614900 31615375|31615200|31615200 GGCAGCTA 8mer-A1 dme-miR-980-3p 3R + 31614887 31614980 stop_codon Med FlyBase G35778.1 CGTGCCGCCGCCTAATCCGTATTTATTATTGGCCCACATCTATGCTAAGGACTCAGTTTTAGCGGCAGCTATCCGTCAGCTATTTGCGGATTTT 47 31614944 0.987822594 14 37 321 0.863013699 1.322219295 0.260273973 0.425531915 0.630136986 47 8 2 63 3R:31614887-31614980 8 36 3353 FBgn0011655 590.06 20.83333333 31.85 0.061010745 1.728 1.130298273 5 6 5.5 0.15 dme-miR-980-3p 6mer2-7 GCAGCT 3R 31615080 31615085 + 3R_31615080_31615085_+ 0.99537778 0.993098628 0.994238204 0.001611638 Med FBtr0085815|FBtr0085816|FBtr0337030 31614900|31614900|31614900 31615200|31615200|31615375 3R + 31615047 31615100 3'utr Med FlyBase G47428.1 AAAAAATTGAAACAACTTAGAAGTCTTAAGTATGCAGCTGTAAAGCACTAAGCA 14 31615079 0.976095096 6 12 72 0.8125 0.812913357 0.1875 0.142857143 0.25 14 2 1 13 3R:31615047-31615100 6 Med FBtr0337030|FBtr0085815|FBtr0085816 31614900|31614900|31614900 31615375|31615200|31615200 GCAGCT 6mer2-7 dme-miR-980-3p 3R + 31615060 31615100 3'utr Med FlyBase G35779.1 AACTTAGAAGTCTTAAGTATGCAGCTGTAAAGCACTAAGCA 10 31615079 0.770884507 3 8 63 0.8125 1.113943352 0 0.5 0.6875 10 3 0 13 3R:31615060-31615100 6 10 3354 FBgn0011655 590.06 20.83333333 31.85 0.016947429 0.48 0.313971743 1 1 1 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 31621154 31621159 + 3R_31621154_31621159_+ 0.803065565 0.985200926 0.894133245 0.128789106 pasha FBtr0085820|FBtr0337031|FBtr0337032 31621116|31621116|31621116 31621474|31621474|31622217 3R + 31621127 31621166 3'utr pasha FlyBase G47436.1 ACACATCTCTCTCGCCAACATTGATTCTCTAGTAGTGCAT 25 31621148 0.834000715 4 25 222 1 1.431363764 0.333333333 0.08 0.148148148 25 0 0 27 3R:31621127-31621166 6 pasha FBtr0337032|FBtr0337031|FBtr0085820 31621116|31621116|31621116 31622217|31621474|31621474 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 31621127 31621165 3'utr pasha FlyBase G35785.1 ACACATCTCTCTCGCCAACATTGATTCTCTAGTAGTGCA 23 31621148 0.787425111 5 22 176 0.939393939 1.491361694 0.636363636 0.347826087 0.545454545 23 2 0 31 3R:31621127-31621165 6 24 3355 FBgn0039861 490.91 22.87333333 35.41333333 0.048888798 1.049256776 0.677710843 6 6 6 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 31662121 31662126 + 3R_31662121_31662126_+ 0.997907155 0.999466451 0.998686803 0.001102592 kek6 FBtr0330107|FBtr0085821 31661629|31661608 31664646|31664646 3R + 31662103 31662140 3'utr kek6 FlyBase G47438.1 AGGTATAGCGACCAAAACTGATCTTCATAAGGTGTATA 10 31662121 0.908221345 2 10 50 1 1.041392685 0.454545455 0.1 0.181818182 10 0 0 11 3R:31662103-31662140 6 kek6 FBtr0330107|FBtr0085821 31661629|31661608 31664646|31664646 TGATCT 6mer3-8 dme-bantam-3p 3R + 31662101 31662142 3'utr kek6 FlyBase G35786.1 TAAGGTATAGCGACCAAAACTGATCTTCATAAGGTGTATAGT 8 31662121 0.90908133 3 8 50 1 1 0.2 0.25 0.4 8 0 0 10 3R:31662101-31662142 6 9 3356 FBgn0039862 176.9033333 3.166666667 4.81 0.050875243 2.842105263 1.871101871 0 0 0 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 31676639 31676644 + 3R_31676639_31676644_+ 0.996507987 0.992186311 0.994347149 0.003055903 CG1815 FBtr0085823|FBtr0085823|FBtr0085823 31675699|31675699|31675699 31677971|31677971|31677971 3R + 31676589 31676675 3'utr CG1815 FlyBase G47457.1 GCGAATTGCATGCGTGAGGCGCAGTTGTACTGCTGTTGGAACACATCCTACTGTGACTATCCCTGCCAGCAGCTTCACTGGCCTGGA 14 31676637 0.967580579 8 13 74 1 1.204119983 0.1875 0.142857143 0.25 14 0 0 16 3R:31676589-31676675 6 CG1815 FBtr0085823|FBtr0085823|FBtr0085823 31675699|31675699|31675699 31677971|31677971|31677971 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 31676594 31676658 3'utr CG1815 FlyBase G35798.1 TTGCATGCGTGAGGCGCAGTTGTACTGCTGTTGGAACACATCCTACTGTGACTATCCCTGCCAGC 5 31676646 0.981573819 3 4 39 0.857142857 0.77815125 0.428571429 0.4 0.571428571 5 1 0 6 3R:31676594-31676658 6 4.5 3357 FBgn0039863 1117.306667 23.11666667 35.54333333 0.004027542 0.194664744 0.126606021 2 -7 -2.5 0.15 dme-miR-92b-3p 8mer-m1 GTGCAATT 3R 31730930 31730937 + 3R_31730930_31730937_+ 0.592737533 0.555438378 0.574087955 0.026374447 ttk FBtr0085826|FBtr0303228|FBtr0085828|FBtr0085830 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 3R + 31730879 31730979 3'utr ttk FlyBase G47480.1 TGGCTTCGATGGAGCTGCAGAAATCTCCAAGCCAGCAGACGTTTTTATGTTGTGCAATTTACCTTTTCAGTTACAATTACACTTATTTTCTAAACCCCCTT 26 31730944 0.904045697 10 26 215 1 1.568201724 0.081081081 0.384615385 0.567567568 26 0 0 37 3R:31730879-31730979 8 ttk FBtr0085830|FBtr0303228|FBtr0085828|FBtr0085826 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 GTGCAATT 8mer-m1 dme-miR-92b-3p 3R + 31730925 31730969 3'utr ttk FlyBase G35814.1 ATGTTGTGCAATTTACCTTTTCAGTTACAATTACACTTATTTTCT 10 31730955 0.949634349 4 10 91 1 1.079181246 0 0.1 0.25 10 0 0 12 3R:31730925-31730969 8 7.5 3358 FBgn0003870 1332.35 36.30666667 55.43333333 0.005629151 0.206573632 0.135297655 -14 -25 -19.5 0.15 dme-miR-282-5p 6mer2-7 GAGGCT 3R 31731787 31731792 + 3R_31731787_31731792_+ 0.99417963 0.999985614 0.997082622 0.004105462 ttk FBtr0085826|FBtr0303228|FBtr0085828|FBtr0085830 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 3R + 31731760 31731826 3'utr ttk FlyBase G47484.1 CTATCAAACGATTTATGTTGTATATCGGAGGCTTAAATTATCGCCAAAGAAAATGAAAATCAAAAAC 27 31731775 0.95655443 8 24 199 0.911764706 1.190331698 0.235294118 0.148148148 0.323529412 27 2 1 31 3R:31731760-31731826 6 ttk FBtr0085830|FBtr0303228|FBtr0085828|FBtr0085826 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 GAGGCT 6mer2-7 dme-miR-282-5p 3R + 31731759 31731810 3'utr ttk FlyBase G35819.1 TCTATCAAACGATTTATGTTGTATATCGGAGGCTTAAATTATCGCCAAAGAA 14 31731776 0.965029601 6 13 109 0.857142857 1.255272505 0.238095238 0.428571429 0.619047619 14 3 0 18 3R:31731759-31731810 6 18.5 3359 FBgn0003870 1332.35 36.30666667 55.43333333 0.01388524 0.509548292 0.333734215 12 11 11.5 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 31732508 31732514 + 3R_31732508_31732514_+ 0.822935242 0.823201552 0.823068397 0.000188373 ttk FBtr0085826|FBtr0303228|FBtr0085828|FBtr0085830 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 3R + 31732488 31732519 3'utr ttk FlyBase G47489.1 ATAGAGTCATGCTTTGATGCCCAAAGAAAATG 7 31732505 0.931405691 2 7 40 1 0.84509804 0.142857143 0 0 7 0 0 7 3R:31732488-31732519 7 ttk FBtr0085830|FBtr0303228|FBtr0085828|FBtr0085826 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 31732442 31732524 3'utr ttk FlyBase G35823.1 AAAAATGTCCAAACTCGAAACCTGAACGAGGAATATAGCTACATATATAGAGTCATGCTTTGATGCCCAAAGAAAATGAAAGA 12 31732505 0.925752224 6 12 43 1 1.322219295 0.19047619 0.416666667 0.666666667 12 0 0 21 3R:31732442-31732524 7 6 3360 FBgn0003870 1332.35 36.30666667 55.43333333 0.004503321 0.165258906 0.108238124 3 3 3 0.15 dme-miR-2b-2-5p 6mer3-8 TTGAAG 3R 31734502 31734507 + 3R_31734502_31734507_+ 0.897224336 0.904165343 0.90069484 0.004908028 ttk FBtr0085827|FBtr0303227|FBtr0085825|FBtr0085829 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 3R + 31734444 31734579 stop_codon ttk FlyBase G47491.1 TGGCGGAGGGCAAGTCCTTGGCTTTGGCCTCTACCGCACAAACCGCAACGTAAAGACTTTGAAGGACCAGAGTTACGGAAGGACTACGAACGCACAACAACGTTTACCTTAAGCAGCGAGCTCTGAACTGTAGAAT 64 31734503 0.923754968 8 63 223 0.986842105 1.875061263 0.315789474 0.15625 0.289473684 64 1 0 75 3R:31734444-31734579 6 ttk FBtr0085825|FBtr0085829|FBtr0303227|FBtr0085827 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 TTGAAG 6mer3-8 dme-miR-2b-2-5p 3R + 31734475 31734521 stop_codon ttk FlyBase G35826.1 TACCGCACAAACCGCAACGTAAAGACTTTGAAGGACCAGAGTTACGG 33 31734503 0.907535055 3 33 105 1 1.662757832 0.152173913 0.272727273 0.47826087 33 0 0 46 3R:31734475-31734521 6 44.5 3361 FBgn0003870 1332.35 36.30666667 55.43333333 0.033399632 1.225670217 0.802766085 -1 -1 -1 0.15 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 31734686 31734693 + 3R_31734686_31734693_+ 0.63110351 0.631127016 0.631115263 1.66E-05 ttk FBtr0085827|FBtr0303227|FBtr0085825|FBtr0085829 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 3R + 31734595 31734703 3'utr ttk FlyBase G47492.1 AAGCAATCGTGGCACTCAAACGCAACACACCAGACTCAAAACGATTTTTAGTTAATGTAAACCCGTAAGCAATATTAATTCTAACACTTGCTCCGTCCAGAACGCCTTT 44 31734684 0.969524576 11 42 253 0.923076923 1.681241237 0.134615385 0.136363636 0.269230769 44 4 0 48 3R:31734595-31734703 8 ttk FBtr0085825|FBtr0085829|FBtr0303227|FBtr0085827 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R + 31734665 31734705 3'utr ttk FlyBase G35827.1 AATATTAATTCTAACACTTGCTCCGTCCAGAACGCCTTTTT 26 31734684 0.672753714 6 23 155 0.842105263 1.204119983 0.157894737 0.346153846 0.552631579 26 5 1 32 3R:31734665-31734705 8 31.5 3362 FBgn0003870 1332.35 36.30666667 55.43333333 0.023642436 0.867609254 0.56825015 2 2 2 0.15 dme-miR-995-5p 6mer3-8 AATTCG 3R 31734813 31734818 + 3R_31734813_31734818_+ 0.635438245 0.618656812 0.627047528 0.011866242 ttk FBtr0085827|FBtr0303227|FBtr0085825|FBtr0085829 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 3R + 31734767 31734904 3'utr ttk FlyBase G47493.1 TGAGCAGTTCAGTGAACTTTAATGACTTTCGGCTTTAATTATAAACAATTCGACTGGCCGCTTACTGGATCCGCACACGATCCGTAAGGCAAGCAACTTTAGAACTTTTCATTTCTCTTTGTGATTTTGTTAAACCTT 57 31734816 0.944035694 18 54 533 0.956521739 1.819543936 0.289855072 0.210526316 0.347826087 57 3 0 66 3R:31734767-31734904 6 ttk FBtr0085825|FBtr0085829|FBtr0303227|FBtr0085827 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 AATTCG 6mer3-8 dme-miR-995-5p 3R + 31734764 31734841 3'utr ttk FlyBase G35828.1 AATTGAGCAGTTCAGTGAACTTTAATGACTTTCGGCTTTAATTATAAACAATTCGACTGGCCGCTTACTGGATCCGCA 25 31734816 0.980015146 11 23 162 0.951219512 1.591064607 0.097560976 0.48 0.682926829 25 2 0 39 3R:31734764-31734841 6 15.5 3363 FBgn0003870 1332.35 36.30666667 55.43333333 0.01163358 0.42691884 0.279615153 -3 -3 -3 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3R 31734886 31734892 + 3R_31734886_31734892_+ 0.521037613 0.521223853 0.521130733 0.000131734 ttk FBtr0085827|FBtr0303227|FBtr0085825|FBtr0085829 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 3R + 31734767 31734904 3'utr ttk FlyBase G47493.1 TGAGCAGTTCAGTGAACTTTAATGACTTTCGGCTTTAATTATAAACAATTCGACTGGCCGCTTACTGGATCCGCACACGATCCGTAAGGCAAGCAACTTTAGAACTTTTCATTTCTCTTTGTGATTTTGTTAAACCTT 57 31734892 0.944035694 18 54 533 0.956521739 1.819543936 0.289855072 0.210526316 0.347826087 57 3 0 66 3R:31734767-31734904 7 ttk FBtr0085825|FBtr0085829|FBtr0303227|FBtr0085827 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 31734873 31734901 3'utr ttk FlyBase G35829.1 TTTCATTTCTCTTTGTGATTTTGTTAAAC 13 31734892 0.61239851 6 13 166 1 1.204119983 0.25 0.230769231 0.375 13 0 0 16 3R:31734873-31734901 7 16.5 3364 FBgn0003870 1332.35 36.30666667 55.43333333 0.012384133 0.45446199 0.297654841 -6 -6 -6 0.15 dme-miR-14-3p 6mer3-8 AAGACT 3R 31735290 31735295 + 3R_31735290_31735295_+ 0.999975146 0.999999532 0.999987339 1.73E-05 ttk FBtr0085827|FBtr0303227|FBtr0085825|FBtr0085829 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 3R + 31735271 31735310 3'utr ttk FlyBase G47496.1 AACGCAACAAATACGACTTAAGACTTGTGCGCTCAATGAC 15 31735298 0.948357808 6 14 71 0.954545455 1.322219295 0.090909091 0.266666667 0.5 15 1 0 21 3R:31735271-31735310 6 ttk FBtr0085825|FBtr0085829|FBtr0303227|FBtr0085827 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 AAGACT 6mer3-8 dme-miR-14-3p 3R + 31735253 31735314 3'utr ttk FlyBase G35831.1 GATTTTTACAGTTTACTTAACGCAACAAATACGACTTAAGACTTGTGCGCTCAATGACTAGA 15 31735297 0.972504993 6 13 67 0.947368421 1.255272505 0.157894737 0.214285714 0.421052632 14 1 0 18 3R:31735253-31735314 6 13.5 3365 FBgn0003870 1332.35 36.30666667 55.43333333 0.010132473 0.371832538 0.243535779 -8 -7 -7.5 0.15 dme-miR-278-3p 8mer-A1 CCCACCGA 3R 31750719 31750726 + 3R_31750719_31750726_+ 0.678004647 0.673872814 0.675938731 0.002921624 CG1910 FBtr0085840|FBtr0085839|FBtr0085841 31750711|31750711|31750711 31751894|31751894|31751894 3R + 31750699 31750755 stop_codon CG1910 FlyBase G47529.1 AAGTGTGTAACTAAACCAATCCCACCGATGGACAATCAACAACTTTAATGCGTTGCA 37 31750727 0.748846817 7 34 139 0.926829268 1.102662342 0.243902439 0.108108108 0.195121951 37 1 2 38 3R:31750699-31750755 8 CG1910 FBtr0085841|FBtr0085840|FBtr0085839 31750711|31750711|31750711 31751894|31751894|31751894 CCCACCGA 8mer-A1 dme-miR-278-3p 3R + 31750700 31750743 stop_codon CG1910 FlyBase G35853.2 AGTGTGTAACTAAACCAATCCCACCGATGGACAATCAACAACTT 19 31750718 0.842783658 4 18 48 1 1.505149978 0.15625 0.473684211 0.6875 19 0 0 32 3R:31750700-31750743 8 25.5 3366 FBgn0022349 2973.373333 120.6666667 184.89 0.008576118 0.211325967 0.137919844 -8 1 -3.5 0.15 dme-bantam-3p 7mer-m8 TGATCTC 3R 31799548 31799554 + 3R_31799548_31799554_+ 0.639899178 0.641757896 0.640828537 0.001314299 Acf1 FBtr0085845 31799537 31799799 3R + 31799516 31799578 stop_codon Acf1 FlyBase G47617.1 ACGGGGAAGTCAAAGCTTGCTGAGCCGGACGCTGATCTCCACCAGCTATCGTGTAAATTAGTT 59 31799548 0.898505178 6 59 247 1 1.86923172 0.135135135 0.186440678 0.351351351 59 0 0 74 3R:31799516-31799578 7 Acf1 FBtr0085845 31799537 31799799 TGATCTC 7mer-m8 dme-bantam-3p 3R + 31799511 31799568 stop_codon Acf1 FlyBase G35921.1 TATGAACGGGGAAGTCAAAGCTTGCTGAGCCGGACGCTGATCTCCACCAGCTATCGTG 31 31799548 0.942977895 4 28 114 0.909090909 1.301029996 0.159090909 0.258064516 0.477272727 31 3 1 40 3R:31799511-31799568 7 41 3367 FBgn0027620 2508.1 60.07666667 92.65666667 0.016347036 0.682461299 0.442493794 0 0 0 0.15 dme-miR-980-3p 6mer3-8 GGCAGC 3R 31851752 31851757 - 3R_31851752_31851757_- 0.999524401 0.999584863 0.999554632 4.28E-05 heph FBtr0300267|FBtr0300268|FBtr0300266|FBtr0346192|FBtr0300269|FBtr0300265|FBtr0085880|FBtr0112864|FBtr0085888|FBtr0112866|FBtr0085881|FBtr0085884|FBtr0085883|FBtr0112865|FBtr0085887|FBtr0085878|FBtr0300270|FBtr0085879|FBtr0300263|FBtr0300264|FBtr0306692|FBtr0085885|FBtr0085886|FBtr0306693|FBtr0085882 31851018|31851018|31851018|31851482|31846985|31851482|31851018|31850247|31851018|31846985|31850980|31851018|31851018|31851482|31851018|31851482|31851482|31851018|31850980|31851482|31851018|31851018|31851018|31851018|31851018 31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854 3R - 31851709 31851778 5'utr heph FlyBase G56121.1 AGCAACACCTTCAGATCCATTGGCAGCAACAAATACAAACTATAATCCGTAGTACAAGAAAAATGCACGC 58 31851758 0.931350159 3 56 207 0.971014493 1.525044807 0.043478261 0.172413793 0.304347826 58 1 1 67 3R:31851709-31851778 6 heph FBtr0085882|FBtr0085883|FBtr0306693|FBtr0300270|FBtr0085885|FBtr0306692|FBtr0300264|FBtr0300263|FBtr0085879|FBtr0085878|FBtr0085887|FBtr0085886|FBtr0112865|FBtr0085884|FBtr0300267|FBtr0085881|FBtr0112864|FBtr0300266|FBtr0300269|FBtr0085880|FBtr0346192|FBtr0300265|FBtr0112866|FBtr0085888|FBtr0300268 31851018|31851018|31851018|31851482|31851018|31851018|31851482|31850980|31851018|31851482|31851018|31851018|31851482|31851018|31851018|31850980|31850247|31851018|31846985|31851018|31851482|31851482|31846985|31851018|31851018 31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 31851740 31851777 5'utr heph FlyBase G42363.1 GCAACACCTTCAGATCCATTGGCAGCAACAAATACAAA 32 31851758 0.771111603 3 31 101 0.943396226 1.698970004 0.018867925 0.46875 0.679245283 32 3 0 50 3R:31851740-31851777 6 44 3368 FBgn0011224 1726 50.21 76.84333333 0.025492468 0.876319458 0.572593589 1 1 1 0.15 dme-miR-8-3p 7mer-m8 CAGTATT 3R 32045473 32045479 - 3R_32045473_32045479_- 0.660679268 0.661468252 0.66107376 0.000557907 krz FBtr0085877 32045312 32049027 3R - 32045450 32045499 3'utr krz FlyBase G56126.1 TTTAATTTTTATATATTTGTCAGTATTGTTGCACCTCTTAGGTAGTAATT 20 32045481 0.782789772 5 18 244 0.904761905 1.278753601 0 0.05 0.095238095 20 2 0 19 3R:32045450-32045499 7 krz FBtr0085877 32045312 32049027 CAGTATT 7mer-m8 dme-miR-8-3p 3R - 32045449 32045496 3'utr krz FlyBase G42366.1 AATTTTTATATATTTGTCAGTATTGTTGCACCTCTTAGGTAGTAATTA 20 32045482 0.750792569 6 18 256 0.911764706 1.491361694 0 0.45 0.676470588 20 3 0 31 3R:32045449-32045496 7 19.5 3369 FBgn0040206 850.0433333 33.93333333 51.95666667 0.022940007 0.574656189 0.375312761 2 3 2.5 0.15 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3R 32046205 32046210 - 3R_32046205_32046210_- 0.509164621 0.526353758 0.51775919 0.0121546 krz FBtr0085877 32045312 32049027 3R - 32046186 32046226 3'utr krz FlyBase G56128.1 ATGGAGAAAGAACATTTTTGACTGACACGTTGGAGCTCCAT 9 32046210 0.646443106 4 9 64 1 1 0.1 0.111111111 0.2 9 0 0 10 3R:32046186-32046226 6 krz FBtr0085877 32045312 32049027 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3R - 32046108 32046229 3'utr krz FlyBase G42367.1 AATATGGAGAAAGAACATTTTTGACTGACACGTTGGAGCTCCATAAGAGAGGAAAAAAGAGTGGACTTTTGGAAAAGACTATGTTTGAAAAGCTTTAATATTGTATAATTAACAATGCATTG 20 32046210 0.961309543 11 19 151 0.964285714 1.431363764 0.285714286 0.3 0.5 20 1 0 27 3R:32046108-32046229 6 9.5 3370 FBgn0040206 850.0433333 33.93333333 51.95666667 0.011175901 0.279960707 0.182844678 0 0 0 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3R 32046688 32046694 - 3R_32046688_32046694_- 0.520948518 0.503820919 0.512384719 0.012111042 krz FBtr0085877 32045312 32049027 3R - 32046662 32046728 3'utr krz FlyBase G56130.1 ACTGTGAGTTACATGTTCTTATTTGTTAAAATGGTGTGATTTTTAAGAAGCTAAGATAACTTTTAAG 16 32046688 0.990882122 6 16 162 1 1.278753601 0.263157895 0.1875 0.315789474 16 0 0 19 3R:32046662-32046728 7 krz FBtr0085877 32045312 32049027 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 32046636 32046749 3'utr krz FlyBase G42368.1 TATGAGCAACATCACTTTTGTACTGTGAGTTACATGTTCTTATTTGTTAAAATGGTGTGATTTTTAAGAAGCTAAGATAACTTTTAAGATAAGTTGTAATGGTTTTGATAATAC 23 32046687 0.98952881 13 22 213 0.971428571 1.531478917 0.342857143 0.391304348 0.6 23 1 0 34 3R:32046636-32046749 7 14 3371 FBgn0040206 850.0433333 33.93333333 51.95666667 0.016469749 0.412573674 0.269455315 -6 -7 -6.5 0.15 dme-miR-12-5p 6mer2-7 ATACTC 3R 32047961 32047966 - 3R_32047961_32047966_- 0.785200803 0.795695907 0.790448355 0.007421156 krz FBtr0085877 32045312 32049027 3R - 32047929 32047983 3'utr krz FlyBase G56134.1 TTGGGAACGAGAAAATGATACTCTGGTATATCAACTATACCGTTCTCTCTTGTAA 5 32047968 0.986891229 2 5 37 1 0.698970004 0.2 0 0 5 0 0 5 3R:32047929-32047983 6 krz FBtr0085877 32045312 32049027 ATACTC 6mer2-7 dme-miR-12-5p 3R - 32047954 32048000 3'utr krz FlyBase G42370.1 ATAGCTCTATCACTAGTTTGGGAACGAGAAAATGATACTCTGGTATA 5 32047968 0.962797288 3 5 30 1 0.84509804 0.571428571 0.2 0.428571429 5 0 0 7 3R:32047954-32048000 6 3.5 3372 FBgn0040206 850.0433333 33.93333333 51.95666667 0.004117437 0.103143418 0.067363829 2 2 2 0.15 dme-miR-184-3p 6mer3-8 TCCGTC 3R 32048094 32048099 - 3R_32048094_32048099_- 0.999437018 0.999961545 0.999699281 0.000370878 krz FBtr0085877 32045312 32049027 3R - 32048080 32048116 3'utr krz FlyBase G56135.1 AAGTCGATCTGACCATTTCCGTCTGTCTGTATAAACG 8 32048100 0.757744421 2 8 59 1 1.079181246 0.083333333 0.375 0.583333333 8 0 0 12 3R:32048080-32048116 6 krz FBtr0085877 32045312 32049027 TCCGTC 6mer3-8 dme-miR-184-3p 3R - 32048088 32048109 3'utr krz FlyBase G42371.1 TCTGACCATTTCCGTCTGTCTG 6 32048100 0.696338536 2 6 44 1 0.954242509 0.111111111 0.5 0.666666667 6 0 0 9 3R:32048088-32048109 6 6.5 3373 FBgn0040206 850.0433333 33.93333333 51.95666667 0.007646669 0.191552063 0.125104254 1 1 1 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 32048592 32048597 - 3R_32048592_32048597_- 0.988385806 0.9967659 0.992575853 0.005925626 krz FBtr0085877 32045312 32049027 3R - 32048575 32048614 3'utr krz FlyBase G56136.1 TCATTTACAAATTCTAATGATCTTTTTATTATGCCTCTTC 28 32048597 0.819447854 2 28 300 1 1.568201724 0 0.285714286 0.459459459 28 0 0 37 3R:32048575-32048614 6 krz FBtr0085877 32045312 32049027 TGATCT 6mer3-8 dme-bantam-3p 3R - 32048575 32048610 3'utr krz FlyBase G42372.1 TTACAAATTCTAATGATCTTTTTATTATGCCTCTTC 29 32048597 0.793438864 4 27 294 0.944444444 1.531478917 0 0.172413793 0.333333333 29 2 0 34 3R:32048575-32048610 6 28.5 3374 FBgn0040206 850.0433333 33.93333333 51.95666667 0.033527703 0.839882122 0.548534035 0 0 0 0.15 dme-miR-14-3p 8mer-A1 AAGACTGA 3R 4241694 4241701 - 3R_4241694_4241701_- 0.643534226 0.643477556 0.643505891 4.00E-05 CG14642 FBtr0089688 4241043 4241883 3R - 4241688 4241712 5'utr CG14642 FlyBase G47748.1 CACGATTCTCTAAGACTGACGGAAT 7 4241704 0.610135787 3 7 29 1 1.041392685 0.636363636 0.285714286 0.545454545 7 0 0 11 3R:4241688-4241712 8 CG14642 FBtr0089688 4241043 4241883 AAGACTGA 8mer-A1 dme-miR-14-3p 3R - 4241663 4241714 5'utr CG14642 FlyBase G36027.1 AACACGATTCTCTAAGACTGACGGAATACGTTAGACCTGTCCGCCTGTGGGT 11 4241703 0.965671453 5 9 47 0.909090909 1 0.181818182 0.1 0.181818182 10 1 0 10 3R:4241663-4241714 8 8.5 3375 FBgn0037222 149 13.89666667 21.19333333 0.05704698 0.611657472 0.401069519 3 2 2.5 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 3R 4309916 4309921 - 3R_4309916_4309921_- 0.98985134 0.989998894 0.989925117 0.000104369 Vps24 FBtr0078958 4309645 4309972 3R - 4309900 4310158 stop_codon Vps24 FlyBase G47755.1 AAGGAGGTGGACAAGGTTTTGTGGGAGATCACAGATGGCAAGCTCGGGGAAGCTCCCCTGCCTCCAGAGGCTACACCGGCGGACAAGGCGTCTGCGTCTGCTGCGCGCGTCGAGGCTGAGCAGGACGATGAGGAGGGTGAGGAACTGCAAGAGATGCAAAGCCGCCTGGCCTCGCTGCGATCTTAAAACAACTGCTATGGGTATTTTATTTAGATTTGAAATTAAAGGCAAGTGATTTTGACTGGCAGACCTTATCAAA 70 4309922 0.927576483 28 68 373 0.962025316 1.278753601 0.265822785 0.128571429 0.227848101 70 0 3 76 3R:4309900-4310158 6 Vps24 FBtr0078958 4309645 4309972 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 4309902 4309948 3'utr Vps24 FlyBase G36030.1 TAGATTTGAAATTAAAGGCAAGTGATTTTGACTGGCAGACCTTATCA 27 4309922 0.602196842 7 25 171 1 1.568201724 0.081081081 0.307692308 0.513513514 26 0 0 37 3R:4309902-4309948 6 27 3376 FBgn0037231 389.0533333 43.63 67.21 0.069399225 0.618840248 0.401725934 1 1 1 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 4326194 4326199 + 3R_4326194_4326199_+ 0.957479675 0.952896327 0.955188001 0.003240953 CG9795 FBtr0100617 4325834 4326379 3R + 4326176 4326255 3'utr CG9795 FlyBase G39927.1 GATTAACTAAGAAAACCTGTACCTATCGAAATGAACAAAAATCAAAATCTATATAGACGCAAAAAGCCTAGAATTTAAAT 119 4326193 0.925950816 5 119 426 1 2.193124598 0.153846154 0.260504202 0.435897436 119 0 0 156 3R:4326176-4326255 6 CG9795 FBtr0100617 4325834 4326379 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 4326170 4326270 3'utr CG9795 FlyBase G30160.1 GTGGATGATTAACTAAGAAAACCTGTACCTATCGAAATGAACAAAAATCAAAATCTATATAGACGCAAAAAGCCTAGAATTTAAATAATAATTAAGTAGGT 118 4326193 0.926434285 7 115 421 0.97515528 1.894869657 0.204968944 0.271186441 0.465838509 118 3 1 157 3R:4326170-4326270 6 108 3377 FBgn0037234 468.08 20.74666667 31.52333333 0.23072979 5.205655527 3.426033626 1 1 1 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 4381017 4381024 + 3R_4381017_4381024_+ 0.619862492 0.609084758 0.614473625 0.007620985 CG11739 FBtr0078916|FBtr0078914|FBtr0078915|FBtr0078913 4380946|4380946|4380946|4380946 4381210|4381210|4381210|4381210 3R + 4381004 4381072 3'utr CG11739 FlyBase G39945.1 TTATTTCCCTTCTTGCATTTATTGGCATTTTGCCTGTTGACTTCTGTTCGAAATACTCCTGATATTAGC 24 4381016 0.731158188 9 23 244 0.961538462 1.096910013 0.230769231 0.083333333 0.153846154 24 0 1 25 3R:4381004-4381072 8 CG11739 FBtr0078913|FBtr0078915|FBtr0078914|FBtr0078916 4380946|4380946|4380946|4380946 4381210|4381210|4381210|4381210 TGCATTTA 8mer-A1 dme-miR-277-3p 3R + 4380995 4381078 3'utr CG11739 FlyBase G30171.1 AGCAACTATTTATTTCCCTTCTTGCATTTATTGGCATTTTGCCTGTTGACTTCTGTTCGAAATACTCCTGATATTAGCCTGACC 17 4381016 0.995153955 4 14 189 0.857142857 1.380211242 0.107142857 0.411764706 0.642857143 17 4 0 24 3R:4380995-4381078 8 15.5 3378 FBgn0037239 393.3433333 36.01 54.94333333 0.039405778 0.43043599 0.282108839 1 1 1 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 4389455 4389461 + 3R_4389455_4389461_+ 0.658921725 0.658935589 0.658928657 9.83E-06 tub FBtr0302338 4389383 4389813 3R + 4389432 4389478 3'utr tub FlyBase G39971.2 ATGCAACCCAGATGTATTCATTTGGCAGCTGGGTGTGGACCTTCTTA 321 4389454 0.790789293 8 314 2679 0.980769231 2.552668216 0.271978022 0.118380062 0.222527473 321 7 0 357 3R:4389432-4389478 7 tub FBtr0302338 4389383 4389813 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 4389382 4389496 stop_codon tub FlyBase G30187.1 TAGATAAAAGCACCGACCATCGGCGGAGATGACATTCCGTTCGATAACTTATGCAACCCAGATGTATTCATTTGGCAGCTGGGTGTGGACCTTCTTATGTTATGCATGAGGTCCA 242 4389453 0.986216904 15 234 1977 0.972826087 2.076761772 0.320652174 0.400826446 0.605978261 242 8 2 358 3R:4389382-4389496 7 274 3379 FBgn0003882 635 38.28 58.43666667 0.431496063 7.157784744 4.688836917 1 2 1.5 0.15 dme-miR-304-5p 7mer-A1 GAGATTA 3R 4391721 4391727 + 3R_4391721_4391727_+ 0.823293058 0.823325686 0.823309372 2.31E-05 CG14646 FBtr0078919|FBtr0302339 4391706|4391706 4392111|4391999 3R + 4391686 4391793 stop_codon CG14646 FlyBase G39980.2 AGATACTAATGACACCACGTGATTTATGACTGTTAGAGATTAAAGGACTCTTAAATCGAACCTGGTTCTTTATTGGTCTTATTTAAGTGTAATCATTTTCAATACAGT 387 4391718 0.985353884 12 377 3097 0.971800434 1.95230801 0.444685466 0.162790698 0.297180043 387 9 4 448 3R:4391686-4391793 7 CG14646 FBtr0302339|FBtr0078919 4391706|4391706 4391999|4392111 GAGATTA 7mer-A1 dme-miR-304-5p 3R + 4391686 4391779 stop_codon CG14646 FlyBase G30192.1 AGATACTAATGACACCACGTGATTTATGACTGTTAGAGATTAAAGGACTCTTAAATCGAACCTGGTTCTTTATTGGTCTTATTTAAGTGTAATC 340 4391718 0.726478229 16 329 2643 0.976608187 2.222716471 0.442495127 0.361764706 0.576998051 340 10 2 501 3R:4391686-4391779 7 310.5 3380 FBgn0037241 543.83 41.31666667 62.96 0.570950481 7.515127067 4.931702668 3 3 3 0.15 dme-miR-305-5p 8mer-m1 AGTACAAT 3R 4391906 4391913 + 3R_4391906_4391913_+ 0.495853317 0.45372684 0.474790079 0.029787934 CG14646 FBtr0078919|FBtr0302339 4391706|4391706 4392111|4391999 3R + 4391853 4391997 3'utr CG14646 FlyBase G39981.1 CACTTTTTAATACTTTAACAATCTAAGCAATCCTAATATTTTTATTTTACTTAAGTACAATTGATCTAAGCATAGACAGAAAGAGTGTTCATATGAGAAATATGCCTTAATATGCTCTGCATAGGAAACCTGTAGTGCAATAAGT 66 4391914 0.979407576 17 66 464 1 1.886490725 0.311688312 0.151515152 0.272727273 66 0 0 77 3R:4391853-4391997 8 CG14646 FBtr0302339|FBtr0078919 4391706|4391706 4391999|4392111 AGTACAAT 8mer-m1 dme-miR-305-5p 3R + 4391896 4391977 3'utr CG14646 FlyBase G30193.1 ATTTTACTTAAGTACAATTGATCTAAGCATAGACAGAAAGAGTGTTCATATGAGAAATATGCCTTAATATGCTCTGCATAGG 29 4391914 0.822069698 10 29 176 1 1.681241237 0.229166667 0.586206897 0.75 29 0 0 48 3R:4391896-4391977 8 20.5 3381 FBgn0037241 543.83 41.31666667 62.96 0.037695603 0.49616781 0.325603558 -8 -8 -8 0.15 dme-miR-31a-5p 6mer3-8 TCTTGC 3R 4396297 4396302 - 3R_4396297_4396302_- 0.999998998 0.534225467 0.767112232 0.3293516 CG9855 FBtr0339552|FBtr0078950 4395977|4396162 4396375|4396375 3R - 4396269 4396308 3'utr CG9855 FlyBase G47790.1 TTTACCTCTTGCACTTTCAAGACGCTCACATCACCACCTA 6 4396298 0.880053025 3 5 36 0.833333333 0.698970004 0.166666667 0 0 6 1 0 5 3R:4396269-4396308 6 CG9855 FBtr0339552|FBtr0078950 4395977|4396162 4396375|4396375 TCTTGC 6mer3-8 dme-miR-31a-5p 3R - 4396229 4396336 3'utr CG9855 FlyBase G36053.1 GAGTTATGGTTTGTTTTAAGTTAATTGTTTTACCTCTTGCACTTTCAAGACGCTCACATCACCACCTAATTTAGGTGGACAAAAATTTTTAATTGTCTGCAGATAACA 11 4396299 0.985564542 7 11 93 1 1.176091259 0.2 0.363636364 0.533333333 11 0 0 15 3R:4396229-4396336 6 4 3382 FBgn0037242 314.87 22.8 34.92 0.012703655 0.175438596 0.114547537 -4 -3 -3.5 0.15 dme-miR-965-3p 6mer2-7 ACGCTT 3R 4406576 4406581 + 3R_4406576_4406581_+ 0.669596615 0.675314059 0.672455337 0.004042883 lost FBtr0078921 4406254 4407182 3R + 4406556 4406604 3'utr lost FlyBase G40000.1 AACGAGAACACAAATCATTGACGCTTTTTCTAAACAATTGCATTTGTTT 19 4406574 0.986775884 5 18 154 0.958333333 1.361727836 0 0.210526316 0.375 19 1 0 23 3R:4406556-4406604 6 lost FBtr0078921 4406254 4407182 ACGCTT 6mer2-7 dme-miR-965-3p 3R + 4406558 4406605 3'utr lost FlyBase G30215.1 CGAGAACACAAATCATTGACGCTTTTTCTAAACAATTGCATTTGTTTT 18 4406574 0.941683695 7 16 153 0.888888889 1.380211242 0 0.388888889 0.592592593 18 3 0 24 3R:4406558-4406605 6 15 3383 FBgn0263594 9369.39 424.1766667 652.24 0.001600958 0.035362624 0.02299767 2 2 2 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 4423176 4423182 - 3R_4423176_4423182_- 0.753220167 0.748433285 0.750826726 0.003384849 srl FBtr0301244|FBtr0301244|FBtr0301244|FBtr0078946|FBtr0078946|FBtr0078946|FBtr0336458|FBtr0336458|FBtr0336458 4422886|4422886|4422886|4422481|4422481|4422481|4422886|4422886|4422886 4423464|4423464|4423464|4423464|4423464|4423464|4423464|4423464|4423464 3R - 4423135 4423300 3'utr srl FlyBase G47814.1 CTTAAAATAGTTGACAGAGCTATACAATGCAAGCAATAAAAACATTGCAATGTACATTAGGATAATTGTAATTACCGTGAAGGAAACCTAACAACAAGAATTGAAAAGAAAATGAAATTGTGATAACCGCGTAATGCATACAAAGTCATTTAAAGCACGTAAGTTA 223 4423183 0.960075895 21 210 1122 0.945525292 1.431363764 0.186770428 0.139013453 0.252918288 223 6 8 243 3R:4423135-4423300 7 srl FBtr0336458|FBtr0336458|FBtr0336458|FBtr0301244|FBtr0301244|FBtr0301244|FBtr0078946|FBtr0078946|FBtr0078946 4422886|4422886|4422886|4422886|4422886|4422886|4422481|4422481|4422481 4423464|4423464|4423464|4423464|4423464|4423464|4423464|4423464|4423464 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 4423154 4423357 3'utr srl FlyBase G36072.1 AATTTCCGAAGTCTCTATCTATAAACCTGAGAAGCCTGATTACAATTCTTAATTTATCTTAAAATAGTTGACAGAGCTATACAATGCAAGCAATAAAAACATTGCAATGTACATTAGGATAATTGTAATTACCGTGAAGGAAACCTAACAACAAGAATTGAAAAGAAAATGAAATTGTGATAACCGCGTAATGCATACAAAGTC 169 4423183 0.829477446 19 157 848 0.95 1.915575699 0.157692308 0.426035503 0.626923077 169 11 2 247 3R:4423154-4423357 7 136.5 3384 FBgn0037248 2796.273333 78.52666667 121.16 0.04881497 1.73826301 1.126609442 1 1 1 0.15 dme-miR-79-3p 6mer2-7 AGCTTT 3R 4465433 4465438 - 3R_4465433_4465438_- 0.989551135 0.991872975 0.990712055 0.001641831 CG31523 FBtr0078938|FBtr0078935|FBtr0335430|FBtr0335429|FBtr0078937|FBtr0345142|FBtr0078936 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 3R - 4465419 4465571 3'utr CG31523 FlyBase G47867.1 TCAGCGCAGTGAGAAGTATTGGTGACAAATTATTTGTAAGTGTAATTCTGTCTGTTAATCCGTGCGTATGGTTTCGTTGTTAGATTATGTGGCTTAAGCTGACAAGTTCAAAAACTATAGAAAACCTAAATAAAGCTTTTTAATTTATATTAA 58 4465432 0.984281754 19 56 448 0.970588235 1.819543936 0.205882353 0.155172414 0.279411765 58 2 0 66 3R:4465419-4465571 6 CG31523 FBtr0335429|FBtr0335430|FBtr0078935|FBtr0078938|FBtr0078936|FBtr0345142|FBtr0078937 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 AGCTTT 6mer2-7 dme-miR-79-3p 3R - 4465418 4465571 3'utr CG31523 FlyBase G36112.1 TCAGCGCAGTGAGAAGTATTGGTGACAAATTATTTGTAAGTGTAATTCTGTCTGTTAATCCGTGCGTATGGTTTCGTTGTTAGATTATGTGGCTTAAGCTGACAAGTTCAAAAACTATAGAAAACCTAAATAAAGCTTTTTAATTTATATTAAA 39 4465432 0.987187196 17 35 313 0.951612903 1.469822016 0.193548387 0.384615385 0.612903226 39 2 1 59 3R:4465418-4465571 6 16.5 3385 FBgn0051523 3326.983333 148.2633333 227.5733333 0.004959448 0.111288473 0.072504101 -6 -6 -6 0.15 dme-miR-79-3p 6mer2-7 AGCTTT 3R 4465781 4465786 - 3R_4465781_4465786_- 0.99991407 0.74156181 0.87073794 0.182682663 CG31523 FBtr0078938|FBtr0078935|FBtr0335430|FBtr0335429|FBtr0078937|FBtr0345142|FBtr0078936 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 3R - 4465750 4465802 3'utr CG31523 FlyBase G47868.1 AAGATCATGGAGATAAAGCTTTTATACTGTAAGTGCAAACCGGCTTAAGGACG 8 4465781 0.982255773 5 8 62 1 0.903089987 0.25 0 0 8 0 0 8 3R:4465750-4465802 6 CG31523 FBtr0335429|FBtr0335430|FBtr0078935|FBtr0078938|FBtr0078936|FBtr0345142|FBtr0078937 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 AGCTTT 6mer2-7 dme-miR-79-3p 3R - 4465745 4465812 3'utr CG31523 FlyBase G36113.1 AAGAGTGACAAAGATCATGGAGATAAAGCTTTTATACTGTAAGTGCAAACCGGCTTAAGGACGAAGAC 8 4465773 0.974210484 6 7 46 0.9 0.954242509 0.2 0.25 0.4 8 1 0 9 3R:4465745-4465812 6 6 3386 FBgn0051523 3326.983333 148.2633333 227.5733333 0.001803436 0.040468536 0.026365128 -5 -13 -9 0.15 dme-miR-92b-3p 7mer-A1 TGCAATA 3R 4465969 4465975 - 3R_4465969_4465975_- 0.782674844 0.717547074 0.750110959 0.046052238 CG31523 FBtr0078938|FBtr0078935|FBtr0335430|FBtr0335429|FBtr0078937|FBtr0345142|FBtr0078936 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 3R - 4465947 4466000 3'utr CG31523 FlyBase G47870.1 ATATTGAGAGAGAACGGCATTTTGTTGCAATACTTTGTAAAGGTCTAATAGTTA 14 4465979 0.985731281 7 13 105 0.9375 1.176091259 0.1875 0.071428571 0.1875 14 1 0 15 3R:4465947-4466000 7 CG31523 FBtr0335429|FBtr0335430|FBtr0078935|FBtr0078938|FBtr0078936|FBtr0345142|FBtr0078937 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 TGCAATA 7mer-A1 dme-miR-92b-3p 3R - 4465958 4466004 3'utr CG31523 FlyBase G36115.1 TTGTATATTGAGAGAGAACGGCATTTTGTTGCAATACTTTGTAAAGG 5 4465980 0.966410597 3 5 33 1 0.84509804 0 0.2 0.428571429 5 0 0 7 3R:4465958-4466004 7 6.5 3387 FBgn0051523 3326.983333 148.2633333 227.5733333 0.001953722 0.043840914 0.028562222 4 5 4.5 0.15 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA 3R 4466612 4466619 - 3R_4466612_4466619_- 0.625074999 0.625477381 0.62527619 0.00028454 CG31523 FBtr0078938|FBtr0078935|FBtr0335430|FBtr0335429|FBtr0078937|FBtr0345142|FBtr0078936 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 3R - 4466553 4466817 stop_codon CG31523 FlyBase G47873.1 AAGCAAGGGGCAATCGAATGGTGCCTACAAGGAGGGCTTCTTCAAGGAGGGCGTGTTATCCAACAACGATGCCATCTTCAACCCGGACAGCAGTAGTTCTAGTCTGCACCAGCGCAAAGTCAAATAACTGCTGATTAGGTGTACTACGATGATATTCATTATGTTTATGTTAAGTGATTAGCGTGTAACTGAACCAGATTGAAGAACAAGACGAGCAAGAAACTTGGCAGAAGTAGCAGAAGACGATTGGCACGACAGCAGCGAA 410 4466619 0.96314446 35 384 1963 0.936440678 1.800324229 0.177966102 0.136585366 0.25 410 24 6 442 3R:4466553-4466817 8 CG31523 FBtr0335429|FBtr0335430|FBtr0078935|FBtr0078938|FBtr0078936|FBtr0345142|FBtr0078937 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p 3R - 4466554 4466756 stop_codon CG31523 FlyBase G36118.1 AACAACGATGCCATCTTCAACCCGGACAGCAGTAGTTCTAGTCTGCACCAGCGCAAAGTCAAATAACTGCTGATTAGGTGTACTACGATGATATTCATTATGTTTATGTTAAGTGATTAGCGTGTAACTGAACCAGATTGAAGAACAAGACGAGCAAGAAACTTGGCAGAAGTAGCAGAAGACGATTGGCACGACAGCAGCGA 267 4466619 0.961991588 27 239 1210 0.894484412 1.45776548 0.189448441 0.4082397 0.621103118 267 32 12 373 3R:4466554-4466756 8 96 3388 FBgn0051523 3326.983333 148.2633333 227.5733333 0.028854969 0.647496571 0.421842044 0 0 0 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 4492581 4492586 - 3R_4492581_4492586_- 0.999028495 0.999659864 0.99934418 0.000446467 CG34357 FBtr0303867|FBtr0335239 4492524|4491941 4493403|4493403 3R - 4492568 4492602 3'utr CG34357 FlyBase G47888.1 GACATGGGTAGATTGCTGATCTTAATAAAATATTA 23 4492587 0.724694815 5 22 184 0.962962963 1.113943352 0.37037037 0.173913043 0.296296296 23 0 1 26 3R:4492568-4492602 6 CG34357 FBtr0335239|FBtr0303867 4491941|4492524 4493403|4493403 TGATCT 6mer3-8 dme-bantam-3p 3R - 4492562 4492609 3'utr CG34357 FlyBase G36129.1 GGCTGACGACATGGGTAGATTGCTGATCTTAATAAAATATTATTATTT 14 4492587 0.985948719 6 13 111 0.947368421 1.255272505 0.473684211 0.285714286 0.473684211 14 1 0 18 3R:4492562-4492609 6 18.5 3389 FBgn0085386 22.73666667 0.763333333 1.17 0.813663686 24.23580786 15.81196581 1 1 1 0.15 dme-miR-8-3p 6mer3-8 CAGTAT 3R 4638351 4638356 - 3R_4638351_4638356_- 0.999982861 0.999997797 0.999990329 1.05E-05 CG9775 FBtr0301297 4638008 4638430 3R - 4638310 4638388 stop_codon CG9775 FlyBase G47907.1 TTAAGCGCGAGGATCTTGACATGGAACTGGATCAGTATATGTCCACCACTAAGTCGGAGATGGACTACTTGCTGAAGTA 25 4638357 0.964787478 9 23 142 0.928571429 1.414973348 0.142857143 0.04 0.142857143 25 2 0 26 3R:4638310-4638388 6 CG9775 FBtr0301297 4638008 4638430 CAGTAT 6mer3-8 dme-miR-8-3p 3R - 4638312 4638385 3'utr CG9775 FlyBase G36142.1 AGCGCGAGGATCTTGACATGGAACTGGATCAGTATATGTCCACCACTAAGTCGGAGATGGACTACTTGCTGAAG 16 4638357 0.922163559 5 14 90 0.95 1.278753601 0.15 0.25 0.4 16 1 0 19 3R:4638312-4638385 6 13.5 3390 FBgn0037261 1038.666667 62.08666667 94.64333333 0.012997433 0.21743799 0.142640792 1 1 1 0.15 dme-miR-12-5p 6mer3-8 AATACT 3R 4644659 4644664 - 3R_4644659_4644664_- 0.999538884 0.958222824 0.978880854 0.029214894 Dip2 FBtr0078893 4644647 4644783 3R - 4644644 4644677 3'utr Dip2 FlyBase G47914.1 TACTTGGAGAATAAATACTGATAAATATTAATTA 29 4644665 0.881629115 4 27 216 0.939393939 1.491361694 0.272727273 0.137931034 0.242424242 29 2 0 31 3R:4644644-4644677 6 Dip2 FBtr0078893 4644647 4644783 AATACT 6mer3-8 dme-miR-12-5p 3R - 4644644 4644684 3'utr Dip2 FlyBase G36147.1 TTTATTATACTTGGAGAATAAATACTGATAAATATTAATTA 10 4644664 0.754319206 4 9 74 0.875 1.146128036 0.5 0.5 0.6875 10 2 0 14 3R:4644644-4644684 6 19.5 3391 FBgn0040466 185 25.7 39.05333333 0.105405405 0.758754864 0.499317173 1 0 0.5 0.15 dme-miR-980-5p 8mer-m1 GAAAAACT 3R 4786579 4786586 - 3R_4786579_4786586_- 0.607904498 0.591724362 0.59981443 0.011441058 ctrip FBtr0334903|FBtr0334902|FBtr0344029 4786282|4786282|4786282 4787826|4787826|4787826 3R - 4786548 4786721 3'utr ctrip FlyBase G47947.1 TGTATAACTTCTATTGTACTTGATGCATACGCATACGAAAGAGAACAGAATGCTGGTAATAAAAATTGATTAACATTTAAACCGAGAAGCGAAATCGATCTTACATTAAAACTAGATACAAATCTTTGCAGTACTGAAAAACTGATTACAGACATGTGGTATATATACATATAA 56 4786576 0.975718129 22 52 323 0.943661972 1.525044807 0.183098592 0.178571429 0.352112676 56 3 1 67 3R:4786548-4786721 8 ctrip FBtr0344029|FBtr0334902|FBtr0334903 4786282|4786282|4786282 4787826|4787826|4787826 GAAAAACT 8mer-m1 dme-miR-980-5p 3R - 4786545 4786602 3'utr ctrip FlyBase G36173.1 AAATCTTTGCAGTACTGAAAAACTGATTACAGACATGTGGTATATATACATATAACTT 21 4786577 0.779210138 9 20 149 0.96875 1.190331698 0 0.380952381 0.59375 21 0 1 31 3R:4786545-4786602 8 20.5 3392 FBgn0260794 5155.516667 58.3 89.56666667 0.003976323 0.351629503 0.228879792 -10 -9 -9.5 0.15 dme-miR-1008-3p 7mer-m8 AGCTGTG 3R 4786937 4786943 - 3R_4786937_4786943_- 0.602274771 0.642726693 0.622500732 0.028603813 ctrip FBtr0334903|FBtr0334902|FBtr0344029 4786282|4786282|4786282 4787826|4787826|4787826 3R - 4786923 4786998 3'utr ctrip FlyBase G47949.1 AAAACGTAATTATCTATCTTGCAAGTCTAAGAGAAAATTTAATGCAAATTTTGCAAGCTGTGTTACATAAAGAAAC 21 4786936 0.812928463 10 20 161 0.956521739 1.041392685 0 0.095238095 0.173913043 21 0 1 22 3R:4786923-4786998 7 ctrip FBtr0344029|FBtr0334902|FBtr0334903 4786282|4786282|4786282 4787826|4787826|4787826 AGCTGTG 7mer-m8 dme-miR-1008-3p 3R - 4786925 4786959 3'utr ctrip FlyBase G36177.1 TAATGCAAATTTTGCAAGCTGTGTTACATAAAGAA 9 4786936 0.668053539 5 9 70 1 1.146128036 0 0.333333333 0.571428571 9 0 0 14 3R:4786925-4786959 7 12.5 3393 FBgn0260794 5155.516667 58.3 89.56666667 0.002424587 0.214408233 0.139560849 -7 -7 -7 0.15 dme-miR-965-3p 7mer-A1 ACGCTTA 3R 4787182 4787188 - 3R_4787182_4787188_- 0.823344391 0.823345714 0.823345052 9.19E-07 ctrip FBtr0301437|FBtr0303914|FBtr0344030|FBtr0334903|FBtr0303911|FBtr0303917|FBtr0303915|FBtr0303912|FBtr0334902|FBtr0344028|FBtr0344029 4787043|4787043|4787043|4786282|4787043|4787043|4787043|4787043|4786282|4787043|4786282 4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826 3R - 4787125 4787217 3'utr ctrip FlyBase G47951.1 AATTATTTGTAAGCATACAATGTGCATAAACGCTTATTAGAAAGAAACGTGAATGAAAATACAATGAAGGGGAAACACTGAAGCATTGGAGGT 125 4787181 0.892332085 13 119 664 0.972789116 2.155336037 0.142857143 0.152 0.278911565 125 4 0 143 3R:4787125-4787217 7 ctrip FBtr0344029|FBtr0344028|FBtr0334902|FBtr0303915|FBtr0303912|FBtr0303917|FBtr0303911|FBtr0334903|FBtr0344030|FBtr0303914|FBtr0301437 4786282|4787043|4786282|4787043|4787043|4787043|4787043|4786282|4787043|4787043|4787043 4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826 ACGCTTA 7mer-A1 dme-miR-965-3p 3R - 4787126 4787207 3'utr ctrip FlyBase G36179.1 AAGCATACAATGTGCATAAACGCTTATTAGAAAGAAACGTGAATGAAAATACAATGAAGGGGAAACACTGAAGCATTGGAGG 76 4787181 0.889613743 8 71 391 0.943396226 2 0.20754717 0.355263158 0.537735849 76 6 0 100 3R:4787126-4787207 7 77.5 3394 FBgn0260794 5155.516667 58.3 89.56666667 0.015032441 1.329331046 0.865277261 -7 -7 -7 0.15 dme-miR-277-3p 6mer3-8 TGCATT 3R 4787366 4787371 - 3R_4787366_4787371_- 0.801667614 0.99636171 0.899014662 0.137669518 ctrip FBtr0301437|FBtr0303914|FBtr0344030|FBtr0334903|FBtr0303911|FBtr0303917|FBtr0303915|FBtr0303912|FBtr0334902|FBtr0344028|FBtr0344029 4787043|4787043|4787043|4786282|4787043|4787043|4787043|4787043|4786282|4787043|4786282 4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826 3R - 4787285 4787406 3'utr ctrip FlyBase G47952.1 AACGCACAAAGCGGTATATTTGTCGATTAGGGCTTTGCATTCGTTCTAGTTAAATTTGTTTAGTTTGCTTTTCCCATTCTTATTATCCTCAAGCAAATTCTAACTCATATTATTCATAATCA 27 4787363 0.989709444 9 25 251 0.96969697 1.204119983 0.212121212 0.185185185 0.333333333 27 0 1 32 3R:4787285-4787406 6 ctrip FBtr0344029|FBtr0344028|FBtr0334902|FBtr0303915|FBtr0303912|FBtr0303917|FBtr0303911|FBtr0334903|FBtr0344030|FBtr0303914|FBtr0301437 4786282|4787043|4786282|4787043|4787043|4787043|4787043|4786282|4787043|4787043|4787043 4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826 TGCATT 6mer3-8 dme-miR-277-3p 3R - 4787351 4787388 3'utr ctrip FlyBase G36180.1 TTTGTCGATTAGGGCTTTGCATTCGTTCTAGTTAAATT 13 4787363 0.685260619 5 12 106 0.944444444 1.230448921 0.166666667 0.307692308 0.5 13 1 0 17 3R:4787351-4787388 6 12.5 3395 FBgn0260794 5155.516667 58.3 89.56666667 0.002424587 0.214408233 0.139560849 -8 -8 -8 0.15 dme-miR-92b-3p 7mer-A1 TGCAATA 3R 4815795 4815801 + 3R_4815795_4815801_+ 0.448299799 0.777150894 0.612725346 0.232532843 CG1129 FBtr0345174|FBtr0078871 4815686|4815686 4816025|4816025 3R + 4815706 4815856 3'utr CG1129 FlyBase G40103.1 AAATTGTAAATACAATCTATTTTTGTTCAGTTCCGCCGTTTCGGTATTCTATAAAGGTGCCTTTTGCTGAACTGCTCTCACCTACGATTTGCAATATTGACACTATGAAAAAAAAGAATAACATTTCCAGCAGTTAGCGTTGCTAACTATT 38 4815802 0.980896788 17 38 274 1 1.633468456 0.186046512 0.131578947 0.23255814 38 0 0 43 3R:4815706-4815856 7 CG1129 FBtr0345174|FBtr0078871 4815686|4815686 4816025|4816025 TGCAATA 7mer-A1 dme-miR-92b-3p 3R + 4815720 4815815 3'utr CG1129 FlyBase G30306.1 ATCTATTTTTGTTCAGTTCCGCCGTTTCGGTATTCTATAAAGGTGCCTTTTGCTGAACTGCTCTCACCTACGATTTGCAATATTGACACTATGAAA 38 4815802 0.736205866 12 36 279 0.948275862 1.740362689 0.189655172 0.447368421 0.637931034 38 3 0 55 3R:4815720-4815815 7 18.5 3396 FBgn0037279 833.0633333 60.27333333 92.65 0.022207195 0.306935074 0.199676201 -7 -7 -7 0.15 dme-miR-8-3p 7mer-A1 AGTATTA 3R 4818685 4818691 - 3R_4818685_4818691_- 0.794788145 0.81667445 0.805731297 0.015475951 CG14657 FBtr0334901|FBtr0078875|FBtr0334900 4818273|4818539|4817978 4820262|4819106|4819106 3R - 4818665 4818712 3'utr CG14657 FlyBase G48022.1 TTTAACCCTCATTGAGCAAAAAGTATTAAATGTATAAAGAAACTAGTT 12 4818701 0.987402577 5 7 77 0.583333333 0.84509804 0.166666667 0 0 12 5 0 7 3R:4818665-4818712 7 CG14657 FBtr0334900|FBtr0078875|FBtr0334901 4817978|4818539|4818273 4819106|4819106|4820262 AGTATTA 7mer-A1 dme-miR-8-3p 3R - 4818675 4818739 3'utr CG14657 FlyBase G36239.1 GATACAAAATGATATATGCAAAAGAAATTTAACCCTCATTGAGCAAAAAGTATTAAATGTATAAA 7 4818701 0.967854345 6 7 43 1 1.041392685 0.454545455 0.428571429 0.636363636 7 0 0 11 3R:4818675-4818739 7 6.5 3397 FBgn0037282 892.63 37.31666667 57.47333333 0.007281853 0.174184904 0.113095929 10 10 10 0.15 dme-miR-14-3p 8mer-A1 AAGACTGA 3R 4818773 4818780 - 3R_4818773_4818780_- 0.638829116 0.636820007 0.637824561 0.001420648 CG14657 FBtr0334901|FBtr0078875|FBtr0334900 4818273|4818539|4817978 4820262|4819106|4819106 3R - 4818759 4818805 3'utr CG14657 FlyBase G48023.1 ATTACAGAATTCTGGCTTGGTCTTCAAGACTGATATAACAAAAAGCA 76 4818784 0.640526233 9 67 599 0.862068966 1.875061263 0.149425287 0.131578947 0.24137931 76 12 0 75 3R:4818759-4818805 8 CG14657 FBtr0334900|FBtr0078875|FBtr0334901 4817978|4818539|4818273 4819106|4819106|4820262 AAGACTGA 8mer-A1 dme-miR-14-3p 3R - 4818747 4818803 3'utr CG14657 FlyBase G36240.1 TACAGAATTCTGGCTTGGTCTTCAAGACTGATATAACAAAAAGCATCCGCTACGAAT 45 4818784 0.933472837 9 41 351 0.930555556 1.525044807 0.194444444 0.4 0.625 45 4 1 67 3R:4818747-4818803 8 56 3398 FBgn0037282 892.63 37.31666667 57.47333333 0.06273596 1.500669942 0.974364923 4 4 4 0.15 dme-miR-184-5p 6mer2-7 GATAAG 3R 4818915 4818920 - 3R_4818915_4818920_- 0.987010867 0.997236923 0.992123895 0.007230874 CG14657 FBtr0334901|FBtr0078875|FBtr0334900 4818273|4818539|4817978 4820262|4819106|4819106 3R - 4818871 4818959 3'utr CG14657 FlyBase G48024.1 ACGTAATACATATTTCCGTTGAAGTAGGTGGAAATGTAAGATAAGCCAGTAATCATGTAAAGTACACGTAGTGTTCAACTCGTTTCGTA 31 4818925 0.959341189 5 30 138 0.972222222 1.544068044 0.277777778 0.129032258 0.25 31 1 0 35 3R:4818871-4818959 6 CG14657 FBtr0334900|FBtr0078875|FBtr0334901 4817978|4818539|4818273 4819106|4819106|4820262 GATAAG 6mer2-7 dme-miR-184-5p 3R - 4818906 4818947 3'utr CG14657 FlyBase G36241.3 TTTCCGTTGAAGTAGGTGGAAATGTAAGATAAGCCAGTAATC 23 4818924 0.820315852 6 23 104 1 1.544068044 0.257142857 0.434782609 0.628571429 23 0 0 35 3R:4818906-4818947 6 24 3399 FBgn0037282 892.63 37.31666667 57.47333333 0.02688684 0.643144261 0.417584967 5 4 4.5 0.15 dme-miR-14-3p 7mer-A1 AGACTGA 3R 4938248 4938254 + 3R_4938248_4938254_+ 0.823349562 0.823348716 0.823349139 6.36E-07 Cdep FBtr0336812 4938074 4940218 3R + 4938232 4938258 3'utr Cdep FlyBase G40137.1 AACTTATTTGTAACTGAGACTGATTTA 6 4938243 0.694031952 4 6 52 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3R:4938232-4938258 7 Cdep FBtr0336812 4938074 4940218 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 4938237 4938267 3'utr Cdep FlyBase G30329.1 ATTTGTAACTGAGACTGATTTACGACTAACA 7 4938246 0.827758969 4 7 50 1 1.079181246 0 0.428571429 0.666666667 7 0 0 12 3R:4938237-4938267 7 6.5 3400 FBgn0265082 2047.223333 54.77333333 83.9 0.003175032 0.118670886 0.077473182 5 2 3.5 0.15 dme-miR-1006-3p 6mer3-8 CGAATT 3R 4949052 4949057 - 3R_4949052_4949057_- 0.434136395 0.273563214 0.353849804 0.113542399 Ubc6 FBtr0078849 4948753 4950278 3R - 4948987 4949203 3'utr Ubc6 FlyBase G48034.1 AGTGTAAAGTGGGATGAAAACATCTCCTAACTGCCATTTGCCACGCTATGTACTCTCTAGGTTCCACTGTGTCTTGGCTGCGGCAATTGATTTAGTTAGTTCTTAAGCGTTTACAATCGACTTTTATTCATGTTTTTTGTTGAATGCGAATTGCTGTACCTTTTGCTATAAACCCTCCACTTTTTGGCACTTTGTGTTGGATGCTCTGAGCATCATG 59 4949041 0.867992338 27 59 499 1 1.838849091 0.333333333 0.169491525 0.289855072 59 0 0 69 3R:4948987-4949203 6 Ubc6 FBtr0078849 4948753 4950278 CGAATT 6mer3-8 dme-miR-1006-3p 3R - 4948985 4949065 3'utr Ubc6 FlyBase G36249.1 GTTGAATGCGAATTGCTGTACCTTTTGCTATAAACCCTCCACTTTTTGGCACTTTGTGTTGGATGCTCTGAGCATCATGTT 24 4949041 0.713475688 10 23 218 0.973684211 1.568201724 0.342105263 0.375 0.605263158 24 1 0 37 3R:4948985-4949065 6 14.5 3401 FBgn0004436 1251.333333 113.3 174.1066667 0.01158764 0.127978817 0.083282279 -16 -16 -16 0.15 dme-miR-34-5p 7mer-A1 ACTGCCA 3R 5226951 5226957 + 3R_5226951_5226957_+ 0.815752147 0.817920336 0.816836242 0.001533149 Vps37B FBtr0078777|FBtr0305002 5226913|5226913 5227526|5227526 3R + 5226912 5226989 stop_codon Vps37B FlyBase G40174.1 TGAGGTCTTGGTCCTTGGTCCTTGGTCCTCAGCGAATTAACTGCCATGGCGCATCAGTCTGCAGCAGGCAAGTTTGTA 24 5226971 0.727038355 9 19 142 0.806451613 1.397940009 0.258064516 0.291666667 0.451612903 24 6 0 25 3R:5226912-5226989 7 Vps37B FBtr0078777|FBtr0305002|FBtr0305001 5226913|5226913|5226913 5227526|5227526|5227526 ACTGCCA 7mer-A1 dme-miR-34-5p 3R + 5226912 5226983 stop_codon Vps37B FlyBase G30347.1 TGAGGTCTTGGTCCTTGGTCCTTGGTCCTCAGCGAATTAACTGCCATGGCGCATCAGTCTGCAGCAGGCAAG 20 5226948 0.953393778 10 20 119 1 1.447158031 0.392857143 0.35 0.535714286 20 0 0 28 3R:5226912-5226983 7 12 3402 FBgn0037299 170.3333333 20.86666667 31.67333333 0.070450098 0.575079872 0.378867607 -20 3 -8.5 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 5227334 5227341 - 3R_5227334_5227341_- 0.498862571 0.498959243 0.498910907 6.83E-05 Kat60 FBtr0078827|FBtr0334909 5227287|5227287 5227991|5227991 3R - 5227314 5227441 3'utr Kat60 FlyBase G48076.1 ATATATCATAGTTTAGTGCAGGCAGAGATGTGTGTACCAGAAAGTTCCCTCTGATTTGCAATTAACCCACTGTAATCAGAAGATGAAACTGAAGCAATATGTACTTAAAGAGAGGATTCTGAAATTTT 473 5227342 0.729365226 20 464 2411 0.980251346 2.737192643 0.122082585 0.143763214 0.272890485 473 11 0 546 3R:5227314-5227441 8 Kat60 FBtr0334909|FBtr0078827 5227287|5227287 5227991|5227991 GTACTTAA 8mer-A1 dme-miR-252-5p 3R - 5227307 5227373 3'utr Kat60 FlyBase G36284.1 ACTGTAATCAGAAGATGAAACTGAAGCAATATGTACTTAAAGAGAGGATTCTGAAATTTTAAACAAT 314 5227342 0.728860425 11 300 1623 0.953333333 2.331427297 0.111111111 0.340764331 0.54 314 20 1 429 3R:5227307-5227373 8 359 3403 FBgn0040208 671.9533333 31.69333333 48.73 0.534263292 11.32730332 7.367124974 1 1 1 0.15 dme-miR-1003-3p 6mer3-8 ATGTGA 3R 5227448 5227453 + 3R_5227448_5227453_+ 0.832550615 0.998784087 0.915667351 0.117544835 Vps37B FBtr0078777|FBtr0305002 5226913|5226913 5227526|5227526 3R + 5227336 5227470 coding-3'utr Vps37B FlyBase G40176.1 AAGTACATATTGCTTCAGTTTCATCTTCTGATTACAGTGGGTTAATTGCAAATCAGAGGGAACTTTCTGGTACACACATCTCTGCCTGCACTAAACTATGATATATATGTATATGTGAAAGTATAAATTAAGCGA 56 5227446 0.984861482 18 53 424 0.953125 1.484299839 0.21875 0.107142857 0.21875 56 2 1 61 3R:5227336-5227470 6 Vps37B FBtr0078777|FBtr0305002|FBtr0305001 5226913|5226913|5226913 5227526|5227526|5227526 ATGTGA 6mer3-8 dme-miR-1003-3p 3R + 5227372 5227469 3'utr Vps37B FlyBase G30350.1 GTGGGTTAATTGCAAATCAGAGGGAACTTTCTGGTACACACATCTCTGCCTGCACTAAACTATGATATATATGTATATGTGAAAGTATAAATTAAGCG 41 5227447 0.987656272 13 33 295 0.810344828 1.371067862 0.413793103 0.365853659 0.551724138 41 10 1 47 3R:5227372-5227469 6 26.5 3404 FBgn0037299 170.3333333 20.86666667 31.67333333 0.155577299 1.269968051 0.836665965 2 1 1.5 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 3R 5236189 5236195 + 3R_5236189_5236195_+ 0.618385137 0.620198126 0.619291632 0.001281985 Mms19 FBtr0078778 5236033 5236288 3R + 5236149 5236204 3'utr Mms19 FlyBase G40186.1 TTTGGAAAAAGCAAAATTATAAAGTAAACGCGAAATTGTATGCATTTTATATTACT 15 5236185 0.990857872 4 14 147 0.9375 1.176091259 0.0625 0.066666667 0.125 15 1 0 15 3R:5236149-5236204 7 Mms19 FBtr0078778 5236033 5236288 TGCATTT 7mer-m8 dme-miR-277-3p 3R + 5236160 5236200 3'utr Mms19 FlyBase G30357.1 CAAAATTATAAAGTAAACGCGAAATTGTATGCATTTTATAT 14 5236185 0.76767203 4 14 133 1 1.322219295 0 0.285714286 0.523809524 14 0 0 21 3R:5236160-5236200 7 14 3405 FBgn0037301 547.33 20.46333333 31.32 0.025578719 0.684150513 0.446998723 4 4 4 0.15 dme-miR-263a-5p 6mer2-7 TGCCAT 3R 5268059 5268064 + 3R_5268059_5268064_+ 0.802789641 0.729243434 0.766016538 0.052005017 Hph FBtr0334275|FBtr0344333 5267839|5267839 5268598|5269046 3R + 5267894 5268399 5'utr Hph FlyBase G40198.1 CAAACACACATGTATAAAGCTAGTTAAAAACTATTTATAGCTTCGGAGGGGCGGCAGCGCAAGCCCGCATTGCGAAAGTTAATCAAAGCTCCTTTAGTCGTTAAGCCTTCTAGTTTAGTCTCTAAGTCGTACCCTTAGTCATTTTCGCATTAACCATTAGCTTACTGCCATGTCAGCGTCCGAGTTGGTTGTTTATTAATTTTAGTTTGTTGCATCTTTGTCAGGACCTTTTGCCTAGCTCATTCTTAGTTTTTGGCTGCCAAAGTATTATACCTAAAGAGAAGTTAACTAGATTCAATAACATAAGCAACTGTCGCGACGCTCATTGCATCTTATCTCAAAATTATTTAACAAGCCAGTAAATCGTGGACAAACGCGGTCACTGGCTAACACTCAATCTGTCGACTCTCATGCATCTTGTTAGACATCTTTTTCATATCGTTTACATCTAATAACAAACGGAAATAAATGTTTGTCCAAATACGTTCTCTTGTTATCTGTAAATC 530 5268055 0.8643311 102 500 4289 0.945773525 1.596963434 0.145135566 0.150943396 0.282296651 530 20 14 593 3R:5267894-5268399 6 Hph FBtr0344333|FBtr0334275 5267839|5267839 5269046|5268598 TGCCAT 6mer2-7 dme-miR-263a-5p 3R + 5267895 5268399 5'utr Hph FlyBase G30371.1 AAACACACATGTATAAAGCTAGTTAAAAACTATTTATAGCTTCGGAGGGGCGGCAGCGCAAGCCCGCATTGCGAAAGTTAATCAAAGCTCCTTTAGTCGTTAAGCCTTCTAGTTTAGTCTCTAAGTCGTACCCTTAGTCATTTTCGCATTAACCATTAGCTTACTGCCATGTCAGCGTCCGAGTTGGTTGTTTATTAATTTTAGTTTGTTGCATCTTTGTCAGGACCTTTTGCCTAGCTCATTCTTAGTTTTTGGCTGCCAAAGTATTATACCTAAAGAGAAGTTAACTAGATTCAATAACATAAGCAACTGTCGCGACGCTCATTGCATCTTATCTCAAAATTATTTAACAAGCCAGTAAATCGTGGACAAACGCGGTCACTGGCTAACACTCAATCTGTCGACTCTCATGCATCTTGTTAGACATCTTTTTCATATCGTTTACATCTAATAACAAACGGAAATAAATGTTTGTCCAAATACGTTCTCTTGTTATCTGTAAATC 372 5268055 0.909777146 86 346 2965 0.925476603 1.882443217 0.131715771 0.379032258 0.59965338 372 37 6 534 3R:5267895-5268399 6 78 3406 FBgn0264785 976.6833333 49.43666667 74.10666667 0.079862118 1.577776279 1.052536884 4 4 4 0.15 dme-miR-1007-3p 7mer-A1 GAGCTTA 3R 5268548 5268554 + 3R_5268548_5268554_+ 0.459592387 0.823348782 0.641470585 0.257214617 Hph FBtr0334275|FBtr0344333 5267839|5267839 5268598|5269046 3R + 5268528 5268554 5'utr Hph FlyBase G40200.1 AAGTGGTTCTATTTGGTACAGAGCTTA 6 5268538 0.658841827 3 6 45 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3R:5268528-5268554 7 Hph FBtr0344333|FBtr0334275 5267839|5267839 5269046|5268598 GAGCTTA 7mer-A1 dme-miR-1007-3p 3R + 5268503 5268567 5'utr Hph FlyBase G30372.1 GTGGTTGTAGAGAGATGGATTTTATAAGTGGTTCTATTTGGTACAGAGCTTAAAGATACTAATAT 9 5268539 0.989654851 6 8 78 1 1.322219295 0.047619048 0.666666667 0.857142857 9 0 0 21 3R:5268503-5268567 7 5 3407 FBgn0264785 976.6833333 49.43666667 74.10666667 0.005119367 0.101139505 0.067470313 10 9 9.5 0.15 dme-miR-1003-3p 7mer-A1 TGTGAGA 3R 5396583 5396589 + 3R_5396583_5396589_+ 0.789207178 0.609308898 0.699258038 0.127207308 CG1172 FBtr0309312|FBtr0078792|FBtr0333810 5396179|5396179|5396179 5397614|5397188|5399510 3R + 5396546 5396608 3'utr CG1172 FlyBase G40225.2 GAGAAAGGGAATTCGAAATGGTGAATAAGAATAAGAGTGTGAGAATGATATACATAAATCATA 13 5396571 0.882269961 4 12 64 0.764705882 1.113943352 0.235294118 0.153846154 0.352941176 13 4 0 13 3R:5396546-5396608 7 CG1172 FBtr0078792|FBtr0333810|FBtr0309312 5396179|5396179|5396179 5397188|5399510|5397614 TGTGAGA 7mer-A1 dme-miR-1003-3p 3R + 5396546 5396592 3'utr CG1172 FlyBase G30393.1 GAGAAAGGGAATTCGAAATGGTGAATAAGAATAAGAGTGTGAGAATG 10 5396564 0.805981437 4 10 39 1 1.230448921 0.117647059 0.5 0.705882353 10 0 0 17 3R:5396546-5396592 7 6.5 3408 FBgn0264712 391.6633333 23.33 36.07 0.016595886 0.27861123 0.180205157 12 19 15.5 0.15 dme-miR-999-3p 7mer-m8 AGTTAAC 3R 5397070 5397076 + 3R_5397070_5397076_+ 0.425036931 0.544209563 0.484623247 0.084267824 CG1172 FBtr0309312|FBtr0078792|FBtr0333810 5396179|5396179|5396179 5397614|5397188|5399510 3R + 5397031 5397141 3'utr CG1172 FlyBase G40228.1 GAGGAGGGAGGGCAGTGAATGCGAGGTGGGGAGTTGGAGAGTTAACCCAAGTACCTTATAAATGTATATGATTTAATTTGCGTTTGGAGTCAATAACTTATCTCTGATGTA 34 5397072 0.98171724 11 32 234 0.921052632 1.06694679 0.131578947 0.117647059 0.210526316 34 1 2 35 3R:5397031-5397141 7 CG1172 FBtr0078792|FBtr0333810|FBtr0309312 5396179|5396179|5396179 5397188|5399510|5397614 AGTTAAC 7mer-m8 dme-miR-999-3p 3R + 5397024 5397095 3'utr CG1172 FlyBase G30397.1 ACATCGTGAGGAGGGAGGGCAGTGAATGCGAGGTGGGGAGTTGGAGAGTTAACCCAAGTACCTTATAAATGT 15 5397072 0.946216683 7 15 61 1 1.255272505 0.166666667 0.2 0.333333333 15 0 0 18 3R:5397024-5397095 7 14.5 3409 FBgn0264712 391.6633333 23.33 36.07 0.037021592 0.62151736 0.401996119 -2 -2 -2 0.15 dme-miR-33-5p 6mer3-8 CAATGC 3R 5397500 5397505 + 3R_5397500_5397505_+ 0.912305158 0.74830837 0.830306764 0.115963249 CG1172 FBtr0309312|FBtr0333810 5396179|5396179 5397614|5399510 3R + 5397484 5397521 3'utr CG1172 FlyBase G40230.1 ACACTGTGCGAAAGTGCAATGCCAAAGTTGAAATAAAT 22 5397501 0.776059234 5 21 93 0.923076923 1.380211242 0.307692308 0.181818182 0.307692308 22 2 0 24 3R:5397484-5397521 6 CG1172 FBtr0333810|FBtr0309312 5396179|5396179 5399510|5397614 CAATGC 6mer3-8 dme-miR-33-5p 3R + 5397487 5397532 3'utr CG1172 FlyBase G30399.1 CTGTGCGAAAGTGCAATGCCAAAGTTGAAATAAATATTGATGGGTG 6 5397502 0.931761248 4 6 26 1 0.954242509 0.444444444 0.5 0.666666667 6 0 0 9 3R:5397487-5397532 6 12.5 3410 FBgn0264712 391.6633333 23.33 36.07 0.031915165 0.535790827 0.346548378 -1 -2 -1.5 0.15 dme-miR-307a-3p 8mer-A1 GGTTGTGA 3R 5458900 5458907 - 3R_5458900_5458907_- 0.660306647 0.662823321 0.661564984 0.001779576 PEK FBtr0078770|FBtr0330027|FBtr0330026 5458561|5458561|5458561 5459391|5459391|5459391 3R - 5458883 5458928 3'utr PEK FlyBase G48172.1 CTAATTGCCCATAGAGATAATGGTTGTGACTAATCGCTTGGCATAC 70 5458908 0.798438518 3 67 491 0.953488372 1.436692598 0.093023256 0.171428571 0.325581395 70 2 2 82 3R:5458883-5458928 8 PEK FBtr0330027|FBtr0330026|FBtr0078770 5458561|5458561|5458561 5459391|5459391|5459391 GGTTGTGA 8mer-A1 dme-miR-307a-3p 3R - 5458884 5458924 3'utr PEK FlyBase G36375.1 TTGCCCATAGAGATAATGGTTGTGACTAATCGCTTGGCATA 55 5458908 0.796734868 3 53 371 0.975609756 1.903089987 0.158536585 0.381818182 0.585365854 55 2 0 80 3R:5458884-5458924 8 62.5 3411 FBgn0037327 1339.34 35.69 54.59666667 0.046664775 1.75119081 1.144758532 1 1 1 0.15 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 5469515 5469520 + 3R_5469515_5469520_+ 0.964541226 0.990722489 0.977631857 0.018512975 CG12162 FBtr0078680|FBtr0078681 5469438|5469438 5469539|5469566 3R + 5469497 5469534 3'utr CG12162 FlyBase G40235.1 CATGCGTACATGTGTTTAGTGCAAATTACAATAATCAA 20 5469511 0.713485644 3 20 169 1 1.322219295 0 0.05 0.095238095 20 0 0 21 3R:5469497-5469534 6 CG12162 FBtr0078681|FBtr0078680 5469438|5469438 5469566|5469539 GTGCAA 6mer3-8 dme-miR-92b-3p 3R + 5469493 5469532 3'utr CG12162 FlyBase G30403.1 AATGCATGCGTACATGTGTTTAGTGCAAATTACAATAATC 13 5469512 0.740069938 3 13 107 1 1.361727836 0 0.461538462 0.695652174 13 0 0 23 3R:5469493-5469532 6 16.5 3412 FBgn0037329 203.12 15.37666667 23.49666667 0.081232769 1.073054411 0.702227266 4 3 3.5 0.15 dme-miR-999-3p 6mer2-7 GTTAAC 3R 5480471 5480476 - 3R_5480471_5480476_- 0.959812994 0.93239796 0.946105477 0.019385332 ksr FBtr0344273|FBtr0078766|FBtr0344272 5478388|5480305|5479089 5480736|5480736|5480736 3R - 5480463 5480498 3'utr ksr FlyBase G48212.2 ACGAAACAAAGGCAAATCAAATGTTAACTCGAAAAA 29 5480477 0.930655244 2 28 112 0.96875 1.491361694 0.15625 0.068965517 0.15625 29 1 0 31 3R:5480463-5480498 6 ksr FBtr0078766|FBtr0344272|FBtr0344273 5480305|5479089|5478388 5480736|5480736|5480736 GTTAAC 6mer2-7 dme-miR-999-3p 3R - 5480444 5480492 3'utr ksr FlyBase G36399.1 CAAAGGCAAATCAAATGTTAACTCGAAAAAGACAAAACGCTTAAATGTT 18 5480477 0.775115524 2 15 72 0.842105263 0.903089987 0.157894737 0.055555556 0.105263158 18 2 1 16 3R:5480444-5480492 6 21.5 3413 FBgn0015402 480.34 14.36 21.92333333 0.044759962 1.497214485 0.980690284 1 1 1 0.15 dme-miR-34-5p 7mer-A1 ACTGCCA 3R 5485110 5485116 + 3R_5485110_5485116_+ 0.468587941 0.467043344 0.467815643 0.001092197 Hcs FBtr0078683|FBtr0345254|FBtr0345253|FBtr0336769 5484906|5484906|5484906|5484906 5485393|5485393|5485393|5485393 3R + 5485098 5485146 3'utr Hcs FlyBase G40256.1 ACTAAATTAAATACTGCCAAAGAGAATTATATGTTAAAGGAAGTCTCAA 12 5485111 0.958529711 4 12 57 1 1.176091259 0.066666667 0.166666667 0.333333333 12 0 0 15 3R:5485098-5485146 7 Hcs FBtr0345253|FBtr0336769|FBtr0078683|FBtr0345254 5484906|5484906|5484906|5484906 5485393|5485393|5485393|5485393 ACTGCCA 7mer-A1 dme-miR-34-5p 3R + 5485092 5485124 3'utr Hcs FlyBase G30417.1 TAATCCACTAAATTAAATACTGCCAAAGAGAAT 7 5485111 0.938792776 2 7 31 1 0.84509804 0.285714286 0 0 7 0 0 7 3R:5485092-5485124 7 8.5 3414 FBgn0037332 392.2933333 11.98 18.24666667 0.02166746 0.70951586 0.465838509 -1 -1 -1 0.15 dme-miR-1003-3p 7mer-m8 ATGTGAG 3R 5539637 5539643 - 3R_5539637_5539643_- 0.573511049 0.611194489 0.592352769 0.026646258 CG2519 FBtr0078761|FBtr0336771|FBtr0078762 5539508|5539508|5539508 5541031|5541031|5541031 3R - 5539603 5539666 3'utr CG2519 FlyBase G48224.1 ATGTATCAATAAATTATGAATGTATGTGAGCTCGCAACTTTATAAGCAATGTTTAGACGCAGGA 91 5539646 0.990777561 6 88 910 0.947916667 1.658011397 0.041666667 0.054945055 0.104166667 91 4 1 91 3R:5539603-5539666 7 CG2519 FBtr0078762|FBtr0078761|FBtr0336771 5539508|5539508|5539508 5541031|5541031|5541031 ATGTGAG 7mer-m8 dme-miR-1003-3p 3R - 5539608 5539660 3'utr CG2519 FlyBase G36409.1 CAATAAATTATGAATGTATGTGAGCTCGCAACTTTATAAGCAATGTTTAGACG 57 5539646 0.989592228 7 51 523 0.89010989 1.607455023 0.153846154 0.438596491 0.648351648 57 9 1 81 3R:5539608-5539660 7 73.5 3415 FBgn0037336 963.7466667 20.52333333 31.41666667 0.076264855 3.581289589 2.339522546 3 3 3 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 5540463 5540468 - 3R_5540463_5540468_- 0.99962867 0.999809413 0.999719041 0.000127774 CG2519 FBtr0078761|FBtr0336771|FBtr0078762 5539508|5539508|5539508 5541031|5541031|5541031 3R - 5540452 5540483 3'utr CG2519 FlyBase G48229.1 ATGAGATTTTTCTTTGTACCTAACCAACAACA 12 5540469 0.865896085 2 11 94 1 1.176091259 0.333333333 0.166666667 0.333333333 12 0 0 15 3R:5540452-5540483 6 CG2519 FBtr0078762|FBtr0078761|FBtr0336771 5539508|5539508|5539508 5541031|5541031|5541031 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 5540451 5540493 3'utr CG2519 FlyBase G36413.1 AACATAAGCCATGAGATTTTTCTTTGTACCTAACCAACAACAA 16 5540469 0.981978876 3 15 113 1 1.361727836 0 0.375 0.565217391 16 0 0 23 3R:5540451-5540493 6 12.5 3416 FBgn0037336 963.7466667 20.52333333 31.41666667 0.012970213 0.609062855 0.397877984 1 1 1 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3R 5540650 5540656 - 3R_5540650_5540656_- 0.655918607 0.661450072 0.65868434 0.003911361 CG2519 FBtr0078761|FBtr0336771|FBtr0078762 5539508|5539508|5539508 5541031|5541031|5541031 3R - 5540513 5540985 3'utr CG2519 FlyBase G48230.1 TCATATAGATTTCTCGTGGCTGCTCGCTGTTGAAAAAAATCCGTTCTATCGAATGAAATCTCGAATATTGTGTTATTAAAGCGATGTTTTAAAAAGGAATCCGATTGTTCACACAAGAGTCCGAATCTCAATTAGAAAAACAAAATTACAGACCAGGGAACAATCGTAAATACTTCAAATTTTCTTCCCTTCTCAATATGAAATCCAAGGCAGCTAGCTAAAGTGTAATAAGAGCAAATTTATCTAACTATATTTACAGTATATGATATACATATATGATTCGGTAATCTACACCGCATAGGCGAAAAATCGAAAAGTAAAAACTTCAATCTAGTCGCAAGCAAATTTTATGCAGCAATCTAATTCGTTTTCGTATGCAATCTATAGGCATATTCTAATCAAAGCTTCATGACAGTTTTACATCCGAGTTTAGTTTATTGCGATATCCGTTCTAAAAGCCAATAAAGAAACAT 351 5540657 0.980791009 67 305 2176 0.871733967 1.610423555 0.123515439 0.170940171 0.308788599 351 46 8 367 3R:5540513-5540985 7 CG2519 FBtr0078762|FBtr0078761|FBtr0336771 5539508|5539508|5539508 5541031|5541031|5541031 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3R - 5540623 5540671 3'utr CG2519 FlyBase G36415.1 AAGTAAAAACTTCAATCTAGTCGCAAGCAAATTTTATGCAGCAATCTAA 44 5540659 0.765630006 6 39 226 0.915492958 1.511883361 0.028169014 0.409090909 0.633802817 44 5 1 65 3R:5540623-5540671 7 49 3417 FBgn0037336 963.7466667 20.52333333 31.41666667 0.050843237 2.387526393 1.559681698 1 3 2 0.15 dme-miR-980-3p 8mer-A1 GGCAGCTA 3R 5540770 5540777 - 3R_5540770_5540777_- 0.611933192 0.660104439 0.636018816 0.034062182 CG2519 FBtr0078761|FBtr0336771|FBtr0078762 5539508|5539508|5539508 5541031|5541031|5541031 3R - 5540513 5540985 3'utr CG2519 FlyBase G48230.1 TCATATAGATTTCTCGTGGCTGCTCGCTGTTGAAAAAAATCCGTTCTATCGAATGAAATCTCGAATATTGTGTTATTAAAGCGATGTTTTAAAAAGGAATCCGATTGTTCACACAAGAGTCCGAATCTCAATTAGAAAAACAAAATTACAGACCAGGGAACAATCGTAAATACTTCAAATTTTCTTCCCTTCTCAATATGAAATCCAAGGCAGCTAGCTAAAGTGTAATAAGAGCAAATTTATCTAACTATATTTACAGTATATGATATACATATATGATTCGGTAATCTACACCGCATAGGCGAAAAATCGAAAAGTAAAAACTTCAATCTAGTCGCAAGCAAATTTTATGCAGCAATCTAATTCGTTTTCGTATGCAATCTATAGGCATATTCTAATCAAAGCTTCATGACAGTTTTACATCCGAGTTTAGTTTATTGCGATATCCGTTCTAAAAGCCAATAAAGAAACAT 351 5540784 0.980791009 67 305 2176 0.871733967 1.610423555 0.123515439 0.170940171 0.308788599 351 46 8 367 3R:5540513-5540985 8 CG2519 FBtr0078762|FBtr0078761|FBtr0336771 5539508|5539508|5539508 5541031|5541031|5541031 GGCAGCTA 8mer-A1 dme-miR-980-3p 3R - 5540748 5540871 3'utr CG2519 FlyBase G36417.1 AAGAGTCCGAATCTCAATTAGAAAAACAAAATTACAGACCAGGGAACAATCGTAAATACTTCAAATTTTCTTCCCTTCTCAATATGAAATCCAAGGCAGCTAGCTAAAGTGTAATAAGAGCAAA 106 5540782 0.854997342 22 90 520 0.838709677 1.414973348 0.064516129 0.349056604 0.55483871 106 21 4 130 3R:5540748-5540871 8 85.5 3418 FBgn0037336 963.7466667 20.52333333 31.41666667 0.08871626 4.16598993 2.721485411 7 5 6 0.15 dme-miR-980-5p 7mer-m1 AAAAACT 3R 5558130 5558136 - 3R_5558130_5558136_- 0.613063531 0.765586624 0.689325078 0.107850118 Pi4KIIalpha FBtr0078756|FBtr0078755|FBtr0078757 5557661|5557661|5557661 5558297|5558297|5558297 3R - 5558108 5558149 3'utr Pi4KIIalpha FlyBase G48261.1 GTATTTTTTGCCAAAAAACTCAAATGGTCATATTCAATAATT 13 5558125 0.766484601 3 10 69 0.846153846 1.041392685 0.076923077 0.083333333 0.153846154 12 2 0 11 3R:5558108-5558149 7 Pi4KIIalpha FBtr0078757|FBtr0078756|FBtr0078755 5557661|5557661|5557661 5558297|5558297|5558297 AAAAACT 7mer-m1 dme-miR-980-5p 3R - 5558108 5558169 3'utr Pi4KIIalpha FlyBase G36438.1 GGAGCACGGAGCCTAGAAATGTATTTTTTGCCAAAAAACTCAAATGGTCATATTCAATAATT 9 5558124 0.97316693 6 9 57 1 1.041392685 0.090909091 0.222222222 0.363636364 9 0 0 11 3R:5558108-5558169 7 7 3419 FBgn0037339 341.1033333 13.78666667 21.30666667 0.020521641 0.507736944 0.32853567 -11 -12 -11.5 0.15 dme-miR-970-3p 6mer3-8 TCTTAT 3R 5570196 5570201 + 3R_5570196_5570201_+ 0.999999904 1 0.999999952 7.07E-08 Rheb FBtr0078694|FBtr0078693 5570116|5570116 5570491|5570491 3R + 5570140 5570294 3'utr Rheb FlyBase G40293.1 CGGCCGAACTGTTGGAAATACGGCAAATCGCTATGGCAATACGAAAATCGATTATCTCTTATCTACACAGTTGGGTCAGCGTGCATGGCGGGGCCGTACCCTTTGTGCGCAGCAGGAAAATCTAAAAATCTAATAGACCTAGTATTCTTAAGACC 61 5570198 0.983994104 16 59 455 0.96969697 1.505149978 0.075757576 0.081967213 0.151515152 61 1 1 64 3R:5570140-5570294 6 Rheb FBtr0078694|FBtr0078693 5570116|5570116 5570491|5570491 TCTTAT 6mer3-8 dme-miR-970-3p 3R + 5570180 5570247 3'utr Rheb FlyBase G30441.1 ACGAAAATCGATTATCTCTTATCTACACAGTTGGGTCAGCGTGCATGGCGGGGCCGTACCCTTTGTGC 25 5570191 0.983910273 7 24 185 0.954545455 1.62324929 0 0.6 0.772727273 25 2 0 42 3R:5570180-5570247 6 30.5 3420 FBgn0041191 427.6933333 44.04666667 67.49 0.071312779 0.692447404 0.451918803 -2 5 1.5 0.15 dme-miR-282-5p 7mer-A1 GAGGCTA 3R 5582119 5582125 - 3R_5582119_5582125_- 0.823135104 0.823137664 0.823136384 1.84E-06 CG2926 FBtr0336762 5579299 5584787 3R - 5582099 5582179 5'utr CG2926 FlyBase G48289.1 ATTTGCAGTGCTGTGGGAGCAGTAAAGAAGACGAAGCGCAAGCGTAAAAAGTTGGAGGCTAAGCCAGTGGCTATCATCGAT 123 5582127 0.951597146 7 121 561 0.978571429 2.136720567 0.428571429 0.12195122 0.228571429 123 3 0 137 3R:5582099-5582179 7 CG2926 FBtr0336762 5579299 5584787 GAGGCTA 7mer-A1 dme-miR-282-5p 3R - 5582099 5582148 5'utr CG2926 FlyBase G36458.1 CGAAGCGCAAGCGTAAAAAGTTGGAGGCTAAGCCAGTGGCTATCATCGAT 87 5582127 0.817003252 4 83 401 0.944444444 2.075546961 0.531746032 0.356321839 0.555555556 87 7 0 119 3R:5582099-5582148 7 101.5 3421 FBgn0037344 2023.256667 29.51333333 45.14 0.050166646 3.43912356 2.248560035 2 2 2 0.15 dme-miR-305-5p 8mer-m1 AGTACAAT 3R 5584645 5584652 - 3R_5584645_5584652_- 0.570362542 0.570362929 0.570362736 2.83E-07 CG2926 FBtr0336762 5579299 5584787 3R - 5584595 5584680 intron-5'utr CG2926 FlyBase G48294.1 AGGATGATGACGATATGAATGAAGATTTAGTACAATTAGATGATGATGATGAGGATACGGATATACCATTGCCTTTGGGGCCTGAG 52 5584654 0.724643409 14 52 383 1 1.763427994 0.172413793 0.115384615 0.206896552 52 0 0 58 3R:5584595-5584680 8 CG2926 FBtr0336762 5579299 5584787 AGTACAAT 8mer-m1 dme-miR-305-5p 3R - 5584534 5584670 5'utr CG2926 FlyBase G36463.1 CGATATGAATGAAGATTTAGTACAATTAGATGATGATGATGAGGATACGGATATACCATTGCCTTTGGGGCCTGAGCCCGAACCCGTTCCCGAAAAAGTCCCGAAAAGTAGTGATGATGACCTCTACGAGCCAGAGA 40 5584654 0.955552208 15 34 251 0.85 1.008600172 0.316666667 0.375 0.583333333 40 5 4 51 3R:5584534-5584670 8 31.5 3422 FBgn0037344 2023.256667 29.51333333 45.14 0.015568959 1.067314208 0.697828977 2 2 2 0.15 dme-miR-965-3p 6mer2-7 ACGCTT 3R 5589766 5589771 - 3R_5589766_5589771_- 0.997222887 0.561160593 0.77919174 0.308342609 noi FBtr0078751 5589599 5589820 3R - 5589735 5589773 3'utr noi FlyBase G48313.1 TGACGCTTCCTCTAAAACCTCAACAGTCTTTATAATTCA 6 5589762 0.753137976 5 6 40 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3R:5589735-5589773 6 noi FBtr0078751 5589599 5589820 ACGCTT 6mer2-7 dme-miR-965-3p 3R - 5589763 5589820 3'utr noi FlyBase G36475.1 AGGACAAGCCTACGATTATGGTCGCTTGAGTACCGGTCAATTCTATATGACGCTTCCT 5 5589780 0.986955637 3 3 33 0.875 0.84509804 0 0.4 0.625 5 1 0 7 3R:5589763-5589820 6 3 3423 FBgn0014366 277.7433333 18.25 27.88666667 0.010801339 0.164383562 0.107578293 -9 9 0 0.15 dme-miR-79-3p 6mer2-7 AGCTTT 3R 5594277 5594282 + 3R_5594277_5594282_+ 0.951676916 0.958532865 0.955104891 0.004847924 Vha26 FBtr0346137|FBtr0078701|FBtr0078700 5593353|5593353|5593353 5595356|5594699|5594699 3R + 5594245 5594305 3'utr Vha26 FlyBase G40316.1 TAGCTAAGTTTGTTGACCTGACCATCAAGTGCAGCTTTCACACCCTCATATAACTACTTAA 25 5594281 0.961779259 7 20 152 0.827586207 1.380211242 0.103448276 0.16 0.275862069 25 5 0 24 3R:5594245-5594305 6 Vha26 FBtr0078700|FBtr0078701|FBtr0346137 5593353|5593353|5593353 5594699|5594699|5595356 AGCTTT 6mer2-7 dme-miR-79-3p 3R + 5594136 5594299 3'utr Vha26 FlyBase G30454.1 ATGTCTGTTGTTGTTGAGATACCGAGAGTAGAGAATACACACTGCTTAGCACGCGACACTTAATACCCATTCATTACACATGCACCAACGACGATGAAGTTTTGCCAAGTAGCTAAGTTTGTTGACCTGACCATCAAGTGCAGCTTTCACACCCTCATATAACT 29 5594281 0.978436069 12 27 177 0.934782609 1.33243846 0.043478261 0.448275862 0.652173913 29 2 1 43 3R:5594136-5594299 6 16.5 3424 FBgn0015324 3424.973333 191.1566667 292.79 0.004817556 0.086316634 0.056354384 -4 -4 -4 0.15 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 3R 5603024 5603031 + 3R_5603024_5603031_+ 0.674817788 0.674905783 0.674861785 6.22E-05 CG1427 FBtr0333279 5601975 5603185 3R + 5603005 5603045 3'utr CG1427 FlyBase G40324.1 GCAGCAACCTGCAAGTTCCGTACCTGACTGTAGCGGCAGGA 7 5603020 0.874591877 3 7 29 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 3R:5603005-5603045 8 CG1427 FBtr0333279 5601975 5603185 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R + 5602988 5603045 intron-3'utr CG1427 FlyBase G30458.1 AGATTTCGGCTCCCACCGCAGCAACCTGCAAGTTCCGTACCTGACTGTAGCGGCAGGA 5 5603035 0.972291768 3 4 24 0.857142857 0.77815125 0.285714286 0.4 0.571428571 5 1 0 6 3R:5602988-5603045 8 5.5 3425 FBgn0037347 155.3333333 12.17666667 18.71333333 0.035407725 0.451683548 0.293908087 4 -11 -3.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 5616811 5616816 - 3R_5616811_5616816_- 0.998516288 0.998067008 0.998291648 0.000317703 Spec2 FBtr0078739 5616642 5617640 3R - 5616793 5616853 3'utr Spec2 FlyBase G48356.1 CTGGGCCAGCGACAATGCACCTAAGATGGACTATGGAGTACCTTTGTAGAACCCTGATTTA 22 5616827 0.96561233 4 22 119 1 1.380211242 0.083333333 0.090909091 0.166666667 22 0 0 24 3R:5616793-5616853 6 Spec2 FBtr0078739 5616642 5617640 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 5616795 5616852 3'utr Spec2 FlyBase G36505.1 TGGGCCAGCGACAATGCACCTAAGATGGACTATGGAGTACCTTTGTAGAACCCTGATT 25 5616809 0.966914639 4 24 141 0.952380952 1.602059991 0.30952381 0.44 0.666666667 25 2 0 40 3R:5616795-5616852 6 19 3426 FBgn0044823 199.1233333 13.74666667 20.92333333 0.09541825 1.382153249 0.908077107 11 -7 2 0.15 dme-miR-34-5p 7mer-A1 ACTGCCA 3R 5625661 5625667 + 3R_5625661_5625667_+ 0.807054466 0.819966745 0.813510605 0.009130304 RpL13A FBtr0335214 5625375 5625947 3R + 5625565 5625713 3'utr RpL13A FlyBase G40338.1 GTGTGTTCGACGGCATCCCATCGCCCTACGACAAGCGTCGCCGCGTCGTCGTGCCCATCGCTATGCGTGTGCTGACCCTGCGCTCCGACCGCAAGTACTGCCAGGTGGGTCGCCTGTCGCACGAGGTCGGCTGGCACTACCAGGACGTG 93 5625660 0.900201278 22 87 372 0.930434783 2.029383778 0.295652174 0.204301075 0.356521739 93 8 0 107 3R:5625565-5625713 7 RpL13A FBtr0335214 5625375 5625947 ACTGCCA 7mer-A1 dme-miR-34-5p 3R + 5625565 5625686 3'utr RpL13A FlyBase G30469.1 GTGTGTTCGACGGCATCCCATCGCCCTACGACAAGCGTCGCCGCGTCGTCGTGCCCATCGCTATGCGTGTGCTGACCCTGCGCTCCGACCGCAAGTACTGCCAGGTGGGTCGCCTGTCGCAC 64 5625660 0.837979753 17 56 282 0.884955752 1.301029996 0.247787611 0.515625 0.725663717 64 9 4 100 3R:5625565-5625686 7 34 3427 FBgn0037351 13566.65333 2375.826667 3587.31 0.002506145 0.014310808 0.009477854 1 1 1 0.15 dme-miR-277-3p 7mer-A1 GCATTTA 3R 5633191 5633197 + 3R_5633191_5633197_+ 0.796854984 0.814511829 0.805683406 0.012485243 CG31549 FBtr0078707|FBtr0335215 5633168|5633168 5633321|5633321 3R + 5633129 5633210 stop_codon CG31549 FlyBase G40345.1 TGCCCGTCGATGGAGGTCGTCACGCCATGTGCCCGCGATAGGATGCGGATGAGCAAATGGTGGCATTTATCGAATTTAGCGT 34 5633186 0.810633139 8 29 206 0.860465116 1.091080469 0.348837209 0.176470588 0.348837209 34 4 2 37 3R:5633129-5633210 7 CG31549 FBtr0335215|FBtr0078707 5633168|5633168 5633321|5633321 GCATTTA 7mer-A1 dme-miR-277-3p 3R + 5633168 5633199 stop_codon CG31549 FlyBase G30475.1 AGGATGCGGATGAGCAAATGGTGGCATTTATC 7 5633186 0.865596495 2 6 40 0.875 0.84509804 0.125 0.142857143 0.25 7 1 0 7 3R:5633168-5633199 7 17 3428 FBgn0051549 46.66666667 5.68 8.726666667 0.364285714 2.992957746 1.948051948 5 5 5 0.15 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3R 5640284 5640289 - 3R_5640284_5640289_- 0.65500074 0.586181674 0.620591207 0.048662382 MTA1-like FBtr0078733|FBtr0290206|FBtr0330315|FBtr0078734 5639117|5638653|5639117|5639117 5640428|5640428|5640302|5640428 3R - 5640113 5640306 5'utr MTA1-like FlyBase G48370.1 CTAGGAGCACTCTCTGGTTTGACTGACGGGCTTGCCATGTACATACACCCGCAGCATAAGGCACACAGACGTGTGGACAGGCATTCGACTTAGGATCAGGATCAGTGTAGTTACAGCATCACTGTATGAACAGGACAACAAAACGCGATACCCGATAGCAACCACAAACCACTTTATTAGCGCTTAAATAGATG 45 5640289 0.965573035 14 40 215 0.839285714 1.371067862 0.142857143 0.2 0.357142857 45 8 1 47 3R:5640113-5640306 6 MTA1-like FBtr0078734|FBtr0330315|FBtr0290206|FBtr0078733 5639117|5639117|5638653|5639117 5640428|5640302|5640428|5640428 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3R - 5640270 5640301 3'utr MTA1-like FlyBase G36517.1 AGCACTCTCTGGTTTGACTGACGGGCTTGCCA 6 5640288 0.648616718 4 6 45 1 1.204119983 0.4375 0.833333333 0.9375 6 0 0 16 3R:5640270-5640301 6 9 3429 FBgn0027951 1255.973333 34.05666667 52.26666667 0.007165757 0.26426544 0.172193878 0 -1 -0.5 0.15 dme-miR-7-5p 6mer3-8 GTCTTC 3R 5640367 5640372 - 3R_5640367_5640372_- 0.999951347 0.995769548 0.997860447 0.002956979 MTA1-like FBtr0078733|FBtr0290206|FBtr0078734 5639117|5638653|5639117 5640428|5640428|5640428 3R - 5640353 5640393 3'utr MTA1-like FlyBase G48371.1 ATCGGCAACCAAGTTGTTATCGTCTTCAGCAAGTAGGTTCG 8 5640374 0.707407518 2 5 47 0.666666667 0.77815125 0.111111111 0.125 0.222222222 8 3 0 6 3R:5640353-5640393 6 MTA1-like FBtr0078734|FBtr0290206|FBtr0078733 5639117|5638653|5639117 5640428|5640428|5640428 GTCTTC 6mer3-8 dme-miR-7-5p 3R - 5640347 5640383 3'utr MTA1-like FlyBase G36518.1 AAGTTGTTATCGTCTTCAGCAAGTAGGTTCGAGCAGC 8 5640374 0.983903798 2 8 61 1 1.041392685 0 0.375 0.545454545 8 0 0 11 3R:5640347-5640383 6 7 3430 FBgn0027951 1255.973333 34.05666667 52.26666667 0.005573367 0.205539787 0.133928571 2 2 2 0.15 dme-miR-970-3p 6mer3-8 TCTTAT 3R 5652596 5652601 + 3R_5652596_5652601_+ 0.555997827 0.993829797 0.774913812 0.309593976 Sec23 FBtr0078711|FBtr0078710|FBtr0304794|FBtr0330314|FBtr0309091|FBtr0339320|FBtr0310266 5652469|5652469|5652469|5652469|5652469|5652469|5652469 5652629|5652629|5652629|5652629|5652629|5652629|5652629 3R + 5652570 5652633 3'utr Sec23 FlyBase G40382.1 ATACAACCACTTATTCCAATTGATCGTCTTATAACGCAATAAACTATTCAAATTATGTTCAACA 63 5652589 0.788541137 9 61 555 0.963414634 1.897627091 0.036585366 0.222222222 0.402439024 63 3 0 79 3R:5652570-5652633 6 Sec23 FBtr0310266|FBtr0339320|FBtr0309091|FBtr0330314|FBtr0304794|FBtr0078710|FBtr0078711 5652469|5652469|5652469|5652469|5652469|5652469|5652469 5652629|5652629|5652629|5652629|5652629|5652629|5652629 TCTTAT 6mer3-8 dme-miR-970-3p 3R + 5652520 5652608 3'utr Sec23 FlyBase G30497.1 GAAGGCGAACGACACCTGGAATCAATGGTCCAGGCAATGAAATTACGAATATACAACCACTTATTCCAATTGATCGTCTTATAACGCAA 37 5652590 0.987430809 10 35 310 0.94 1.672097858 0.02 0.27027027 0.46 37 3 0 47 3R:5652520-5652608 6 46.5 3431 FBgn0262125 974.67 44.53666667 67.54666667 0.047708455 1.044083527 0.688412949 7 6 6.5 0.15 dme-miR-968-5p 8mer-A1 ACTACTTA 3R 5678828 5678835 + 3R_5678828_5678835_+ 0.628685248 0.625078234 0.626881741 0.002550534 Atg17 FBtr0078716|FBtr0334946 5678800|5678800 5679930|5679930 3R + 5678812 5678868 3'utr Atg17 FlyBase G40433.1 TTGGGACTAACATATAACTACTTATATACATAAACGGAGTGTGTATCTAGGCTAAAT 17 5678836 0.77576922 5 14 122 0.823529412 0.84509804 0.411764706 0 0 17 2 1 14 3R:5678812-5678868 8 Atg17 FBtr0334946|FBtr0078716 5678800|5678800 5679930|5679930 ACTACTTA 8mer-A1 dme-miR-968-5p 3R + 5678793 5678892 stop_codon Atg17 FlyBase G30533.1 TCCGAGTAGTGTACGACAGTTGGGACTAACATATAACTACTTATATACATAAACGGAGTGTGTATCTAGGCTAAATCTTGTACTCTATGTAGGAACCGCA 22 5678836 0.977926325 8 19 127 0.9 1.431363764 0.366666667 0.318181818 0.5 22 3 0 27 3R:5678793-5678892 8 12 3432 FBgn0037363 1350.75 25.94 39.87666667 0.008883953 0.462606014 0.300927861 -8 -8 -8 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 5712022 5712028 + 3R_5712022_5712028_+ 0.594925391 0.592218139 0.593571765 0.00191435 plx FBtr0302092|FBtr0302091|FBtr0334947|FBtr0302090|FBtr0334948 5711955|5711955|5711955|5711955|5711955 5712837|5712837|5712837|5712837|5712837 3R + 5712003 5712101 3'utr plx FlyBase G40454.1 AAGGCCCGCCGGCAGAACGGGCAGCTTTCAAACCCAACGCTACTCATAACCTCTTCTGTTGCGGCTTAGATACGATTAACCCAACCTATAAGATACAAA 40 5712049 0.97420217 10 40 246 1 1.707570176 0.176470588 0.175 0.352941176 40 0 0 51 3R:5712003-5712101 7 plx FBtr0302090|FBtr0334948|FBtr0302091|FBtr0334947|FBtr0302092 5711955|5711955|5711955|5711955|5711955 5712837|5712837|5712837|5712837|5712837 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 5712003 5712074 3'utr plx FlyBase G30546.1 AAGGCCCGCCGGCAGAACGGGCAGCTTTCAAACCCAACGCTACTCATAACCTCTTCTGTTGCGGCTTAGATA 27 5712029 0.978762343 7 23 157 0.847826087 1.113943352 0.282608696 0.444444444 0.673913043 27 5 2 39 3R:5712003-5712074 7 7.5 3433 FBgn0261261 331.2833333 6.486666667 9.993333333 0.022639231 1.156217883 0.750500334 -27 -7 -17 0.15 dme-miR-8-3p 6mer2-7 AGTATT 3R 5745763 5745768 + 3R_5745763_5745768_+ 0.799091577 0.99998391 0.899537744 0.142052308 Madm FBtr0078722 5745749 5746862 3R + 5745750 5745795 3'utr Madm FlyBase G40483.1 AAAGTATCAGCTTAGTATTCAGGGCATGCCGGCGCGTATTGTTTTT 9 5745761 0.767541682 4 8 56 0.909090909 1 0.363636364 0.222222222 0.363636364 9 1 0 10 3R:5745750-5745795 6 Madm FBtr0078722 5745749 5746862 AGTATT 6mer2-7 dme-miR-8-3p 3R + 5745752 5745793 3'utr Madm FlyBase G30565.1 AGTATCAGCTTAGTATTCAGGGCATGCCGGCGCGTATTGTTT 5 5745767 0.974262638 5 5 27 1 0.77815125 0.5 0.2 0.333333333 5 0 0 6 3R:5745752-5745793 6 5.5 3434 FBgn0027497 693.01 24.06333333 37.01 0.007936393 0.228563513 0.148608484 2 -4 -1 0.15 dme-miR-12-5p 7mer-m8 AATACTC 3R 5780371 5780377 + 3R_5780371_5780377_+ 0.674229141 0.674208355 0.674218748 1.46E-05 jagn FBtr0078624|FBtr0078625 5780365|5780365 5781308|5780763 3R + 5780357 5780447 stop_codon jagn FlyBase G40487.1 GTTCCAGTAATCTAAATACTCGCCAAACTAGTAAACGCCGGAATGCAGGGCTAGTTGTAAATAATTTGGAAACTTGAAACTAACTCAAAAC 37 5780373 0.830340841 8 35 177 0.94 1.672097858 0.16 0.243243243 0.44 37 3 0 47 3R:5780357-5780447 7 jagn FBtr0078624|FBtr0078625 5780365|5780365 5781308|5780763 AATACTC 7mer-m8 dme-miR-12-5p 3R + 5780360 5780432 stop_codon jagn FlyBase G30566.1 CCAGTAATCTAAATACTCGCCAAACTAGTAAACGCCGGAATGCAGGGCTAGTTGTAAATAATTTGGAAACTTG 28 5780373 0.996941906 5 27 134 0.975609756 1.602059991 0.097560976 0.25 0.487804878 28 1 0 40 3R:5780360-5780432 7 26.5 3435 FBgn0037374 792.6 64.87666667 99.02 0.033434267 0.408467348 0.267622702 -2 -2 -2 0.15 dme-miR-970-3p 6mer3-8 TCTTAT 3R 5780626 5780631 + 3R_5780626_5780631_+ 0.999990441 0.999999859 0.99999515 6.72E-06 jagn FBtr0078624|FBtr0078625 5780365|5780365 5781308|5780763 3R + 5780469 5780641 3'utr jagn FlyBase G40488.1 GAAACTATGGTAAACTAAAGTTATGCAGCTGTTAAGGTATCGCACACTTAGTCATACAGGAAGGGAAACATATGGTCGAAACTGAGCGAAGCGTCGGCGGTAAGGTTATTGTTAGTTGAAAGTTAGTTGATACCGTTTTCAAATTGATTAAATAGACTCTTATCCATATACAC 81 5780621 0.986560022 19 78 658 0.98019802 1.51851394 0.089108911 0.222222222 0.376237624 81 0 2 99 3R:5780469-5780641 6 jagn FBtr0078624|FBtr0078625 5780365|5780365 5781308|5780763 TCTTAT 6mer3-8 dme-miR-970-3p 3R + 5780582 5780648 3'utr jagn FlyBase G30568.1 AGTTGAAAGTTAGTTGATACCGTTTTCAAATTGATTAAATAGACTCTTATCCATATACACATGTACA 35 5780621 0.986078145 6 35 295 1 1.662757832 0.043478261 0.285714286 0.456521739 35 0 0 46 3R:5780582-5780648 6 46 3436 FBgn0037374 792.6 64.87666667 99.02 0.058036841 0.709037661 0.464552616 5 5 5 0.15 dme-miR-8-3p 7mer-A1 AGTATTA 3R 5798593 5798599 + 3R_5798593_5798599_+ 0.763057603 0.635483088 0.699270345 0.090208794 CG10979 FBtr0078631|FBtr0335518 5798393|5798393 5798749|5799994 3R + 5798530 5798683 3'utr CG10979 FlyBase G40526.1 AGTGTCCTTATTGTAAAACCAACTAAGCAAGAAACAGAATCCCTAAATGATAAATACGCTTCGAGTATTACGCGGTAAAAACAACCAAAACGAATTGAAAATCGTAGCATAATTTTGGGCTATTAGCAAATGTTTGTTGTTTGTGTGAAAAAGT 58 5798589 0.946079535 18 53 393 0.925373134 1.315270435 0.164179104 0.137931034 0.253731343 58 3 2 62 3R:5798530-5798683 7 CG10979 FBtr0335518|FBtr0078631 5798393|5798393 5799994|5798749 AGTATTA 7mer-A1 dme-miR-8-3p 3R + 5798567 5798611 3'utr CG10979 FlyBase G30589.1 AATCCCTAAATGATAAATACGCTTCGAGTATTACGCGGTAAAAAC 22 5798588 0.774667251 3 21 146 0.941176471 1.505149978 0.088235294 0.318181818 0.558823529 22 2 0 32 3R:5798567-5798611 7 31.5 3437 FBgn0037379 1005.826667 25.93333333 39.53 0.031317523 1.214652956 0.796863142 4 5 4.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 5798721 5798726 + 3R_5798721_5798726_+ 0.965598727 0.960892457 0.963245592 0.003327786 CG10979 FBtr0078631|FBtr0335518 5798393|5798393 5798749|5799994 3R + 5798697 5798777 3'utr CG10979 FlyBase G40527.1 AATGTTATAGTTAATAATGTATATGTACCTAATTTTATAATCCCGCATAAAGTAAAACACGCAAGTGTATACGGTTGTTGA 77 5798720 0.991226121 5 74 782 0.968085106 1.959041392 0.021276596 0.194805195 0.340425532 77 3 0 91 3R:5798697-5798777 6 CG10979 FBtr0335518|FBtr0078631 5798393|5798393 5799994|5798749 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 5798700 5798744 3'utr CG10979 FlyBase G30591.1 GTTATAGTTAATAATGTATATGTACCTAATTTTATAATCCCGCAT 43 5798720 0.814240558 2 42 454 0.98245614 1.748188027 0 0.23255814 0.421052632 43 1 0 56 3R:5798700-5798744 6 58.5 3438 FBgn0037379 1005.826667 25.93333333 39.53 0.058161115 2.255784062 1.479888692 1 1 1 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 3R 5799020 5799027 + 3R_5799020_5799027_+ 0.643549618 0.643333006 0.643441312 0.000153159 CG10979 FBtr0335518 5798393 5799994 3R + 5798973 5799046 3'utr CG10979 FlyBase G40528.1 TTGTTGAACTTTTGTTTGCTCGCATTTGTAGGTCTCTTCTAAAGCATACCAAAGAATTACTCTTTGTCGACCAA 17 5799019 0.983384985 7 15 126 0.842105263 0.726998728 0.105263158 0.117647059 0.210526316 17 1 2 16 3R:5798973-5799046 8 CG10979 FBtr0335518 5798393 5799994 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 5798995 5799034 3'utr CG10979 FlyBase G30592.1 CATTTGTAGGTCTCTTCTAAAGCATACCAAAGAATTACTC 7 5799019 0.964070263 2 7 49 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3R:5798995-5799034 8 9.5 3439 FBgn0037379 1005.826667 25.93333333 39.53 0.009444967 0.366323907 0.240323805 1 1 1 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 5799436 5799441 + 3R_5799436_5799441_+ 0.999892261 0.999215653 0.999553957 0.000478428 CG10979 FBtr0335518 5798393 5799994 3R + 5799418 5799462 3'utr CG10979 FlyBase G40530.1 AGACATTTGGCAGAGTCCTGATCTACACGAGTGGTTCAACGTATT 8 5799425 0.976524514 4 7 52 0.916666667 1.041392685 0 0.375 0.583333333 8 1 0 11 3R:5799418-5799462 6 CG10979 FBtr0335518 5798393 5799994 TGATCT 6mer3-8 dme-bantam-3p 3R + 5799410 5799466 3'utr CG10979 FlyBase G30593.1 TCCCTCGCAGACATTTGGCAGAGTCCTGATCTACACGAGTGGTTCAACGTATTTATA 8 5799437 0.96422517 5 8 47 1 1.230448921 0.117647059 0.625 0.823529412 8 0 0 17 3R:5799410-5799466 6 7.5 3440 FBgn0037379 1005.826667 25.93333333 39.53 0.007456553 0.289203085 0.18972932 11 -1 5 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3R 5826342 5826348 + 3R_5826342_5826348_+ 0.521223205 0.52122156 0.521222383 1.13E-06 dgrn FBtr0078638|FBtr0078639|FBtr0344116 5826237|5826237|5826237 5826576|5826576|5826576 3R + 5826284 5826402 3'utr dgrn FlyBase G40537.1 AATATAGTTTAAAAAAAAACGCTTAACTATGTTAGAGACGGCAAATAATGTCTGTTCTTGTGATTCAGAAAAAATTAGTTATTTAAGTTGTCCTATGTAATCAGTGGCGCCCAAAAATA 83 5826341 0.99890242 16 73 711 0.871287129 1.467361417 0.297029703 0.168674699 0.316831683 83 11 2 88 3R:5826284-5826402 7 dgrn FBtr0078638|FBtr0078639|FBtr0344116 5826237|5826237|5826237 5826576|5826576|5826576 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 5826258 5826373 3'utr dgrn FlyBase G30596.1 ATTTTTTGCTCTGTGAGCCTTAATATAATATAGTTTAAAAAAAAACGCTTAACTATGTTAGAGACGGCAAATAATGTCTGTTCTTGTGATTCAGAAAAAATTAGTTATTTAAGTTG 48 5826341 0.802247247 13 43 434 0.925373134 1.315270435 0.208955224 0.270833333 0.47761194 48 3 2 62 3R:5826258-5826373 7 48.5 3441 FBgn0037384 485 36.97 56.92333333 0.1 1.311874493 0.852023189 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 5849859 5849866 - 3R_5849859_5849866_- 0.650120898 0.650121053 0.650120975 1.41E-07 disp FBtr0078665|FBtr0078665|FBtr0078665 5849695|5849695|5849695 5850520|5850520|5850520 3R - 5849838 5849887 3'utr disp FlyBase G48474.1 ACGTTTGTAATAACCATGTAACTGTGATACAGAAGGTGAGAATCTTAATG 23 5849869 0.710328348 5 19 140 0.807692308 1.322219295 0.076923077 0.130434783 0.230769231 23 5 0 21 3R:5849838-5849887 8 disp FBtr0078665|FBtr0078665|FBtr0078665 5849695|5849695|5849695 5850520|5850520|5850520 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 5849806 5849897 3'utr disp FlyBase G36594.1 ACACACGCTCACGTTTGTAATAACCATGTAACTGTGATACAGAAGGTGAGAATCTTAATGAAATTGGTGTTTATACAGACATAGTGTTATAT 28 5849870 0.989007898 9 18 178 0.684210526 0.812913357 0.157894737 0.296296296 0.5 27 9 3 26 3R:5849806-5849897 8 22 3442 FBgn0029088 548.99 13.48 20.58 0.04007359 1.632047478 1.068999028 3 4 3.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 6000820 6000826 - 3R_6000820_6000826_- 0.751427794 0.751583129 0.751505462 0.000109814 Rm62 FBtr0309321|FBtr0309321|FBtr0309321|FBtr0078653|FBtr0078653|FBtr0078653|FBtr0078650|FBtr0078650|FBtr0078650|FBtr0078651|FBtr0078651|FBtr0078651|FBtr0302597|FBtr0302597|FBtr0302597|FBtr0309322|FBtr0309322|FBtr0309322|FBtr0078654|FBtr0078654|FBtr0078654|FBtr0309320|FBtr0309320|FBtr0309320|FBtr0078649|FBtr0078649|FBtr0078649|FBtr0301947|FBtr0301947|FBtr0301947|FBtr0078652|FBtr0078652|FBtr0078652|FBtr0309319|FBtr0309319|FBtr0309319 6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000424|6000424|6000424|6000429|6000429|6000429|6000429|6000429|6000429|6000424|6000424|6000424|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429 6003027|6003027|6003027|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6002635|6002635|6002635|6001162|6001162|6001162|6002646|6002646|6002646|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6003646|6003646|6003646 3R - 6000799 6000924 3'utr Rm62 FlyBase G48504.2 AAGTTATTTGACGCTGGCCGCGAGGTCGGTACAACACAATCCAATTGAGAACATCAAAAACACTTTACTTAAACGCAAAAACCAATTTTCAAATATCATGTGATAATTTCTTAATTTAACGCAACG 195 6000829 0.807415952 23 177 1847 0.918103448 1.629409599 0.043103448 0.174358974 0.306034483 195 15 4 213 3R:6000799-6000924 7 Rm62 FBtr0078654|FBtr0078654|FBtr0078654|FBtr0309320|FBtr0309320|FBtr0309320|FBtr0301947|FBtr0301947|FBtr0301947|FBtr0078649|FBtr0078649|FBtr0078649|FBtr0309319|FBtr0309319|FBtr0309319|FBtr0078652|FBtr0078652|FBtr0078652|FBtr0309321|FBtr0309321|FBtr0309321|FBtr0078650|FBtr0078650|FBtr0078650|FBtr0078651|FBtr0078651|FBtr0078651|FBtr0302597|FBtr0302597|FBtr0302597|FBtr0078653|FBtr0078653|FBtr0078653|FBtr0309322|FBtr0309322|FBtr0309322 6000429|6000429|6000429|6000424|6000424|6000424|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000424|6000424|6000424|6000429|6000429|6000429|6000429|6000429|6000429 6001162|6001162|6001162|6002646|6002646|6002646|6001162|6001162|6001162|6001162|6001162|6001162|6003646|6003646|6003646|6001162|6001162|6001162|6003027|6003027|6003027|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6002635|6002635|6002635 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 6000802 6000878 3'utr Rm62 FlyBase G36612.1 GAGAACATCAAAAACACTTTACTTAAACGCAAAAACCAATTTTCAAATATCATGTGATAATTTCTTAATTTAACGCA 138 6000830 0.776641012 15 123 1287 0.893939394 1.946943271 0.065656566 0.369565217 0.560606061 138 20 1 177 3R:6000802-6000878 7 145.5 3443 FBgn0003261 4149.96 168.6633333 258.5433333 0.035060579 0.86266527 0.56276833 3 4 3.5 0.15 dme-miR-1002-5p 6mer3-8 CTACTT 3R 6001037 6001042 - 3R_6001037_6001042_- 0.708650937 0.717055435 0.712853186 0.005942879 Rm62 FBtr0309321|FBtr0078653|FBtr0078650|FBtr0078651|FBtr0302597|FBtr0309322|FBtr0078654|FBtr0309320|FBtr0078649|FBtr0301947|FBtr0078652|FBtr0309319 6000429|6000429|6000429|6000429|6000424|6000429|6000429|6000424|6000429|6000429|6000429|6000429 6003027|6001162|6001162|6001162|6001162|6002635|6001162|6002646|6001162|6001162|6001162|6003646 3R - 6000934 6001232 3'utr Rm62 FlyBase G48505.1 GAGCAACGGACGAGGCTTCGGAGGAGGCGGCGGCGGCGGCGGCGAAGGCAGACACTCGCGCTTCGACTAGATCGCGGACAATTAGATGAGCAGTAAAAGAAGCTATAGGAACAGGAGATTTCAGTAGCTAAACTAAACCGCACTAGGTCCTAAGTTAAATTAAGTTCATAGCTTAAGTTAAGATTTCGTACTACTTTCACCAAACCGCTGACGGTTATTTTTAGACTTAAATTCAGACTCCCTGATTAATGAAACACTACAAAATGCGAGCTATTTGAACATAGCGAATTTATGTTTAA 348 6001037 0.983484194 54 331 2553 0.95754717 2.307496038 0.169811321 0.189655172 0.33490566 348 17 1 406 3R:6000934-6001232 6 Rm62 FBtr0078654|FBtr0309320|FBtr0301947|FBtr0078649|FBtr0309319|FBtr0078652|FBtr0309321|FBtr0078650|FBtr0078651|FBtr0302597|FBtr0078653|FBtr0309322 6000429|6000424|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000424|6000429|6000429 6001162|6002646|6001162|6001162|6003646|6001162|6003027|6001162|6001162|6001162|6001162|6002635 CTACTT 6mer3-8 dme-miR-1002-5p 3R - 6000888 6001190 3'utr Rm62 FlyBase G36612.2 CGAAGGCAGACACTCGCGCTTCGACTAGATCGCGGACAATTAGATGAGCAGTAAAAGAAGCTATAGGAACAGGAGATTTCAGTAGCTAAACTAAACCGCACTAGGTCCTAAGTTAAATTAAGTTCATAGCTTAAGTTAAGATTTCGTACTACTTTCACCAAACCGCTGACGGTTATTTTTAGACTTAAATTCAGACTCCCTGATTAATGAAACACTACAAAATGCGAGCTATTTGAACATAGCGAATTTATGTTTAAATGATTTGTAAGTTATTTGACGCTGGCCGCGAGGTCGGTACAACAC 251 6001037 0.92983781 46 229 1764 0.910994764 1.696481204 0.193717277 0.362549801 0.581151832 251 28 6 348 3R:6000888-6001190 6 129 3444 FBgn0003261 4149.96 168.6633333 258.5433333 0.031084637 0.76483725 0.498949241 -5 -5 -5 0.15 dme-miR-33-5p 6mer3-8 CAATGC 3R 6001604 6001609 - 3R_6001604_6001609_- 1 0.999987264 0.999993632 8.98E-06 Rm62 FBtr0309321|FBtr0309322|FBtr0309320|FBtr0309319 6000429|6000429|6000424|6000429 6003027|6002635|6002646|6003646 3R - 6001560 6001646 5'utr Rm62 FlyBase G48507.1 ACACAAAGGGCACCTCTTTCGCCTTCTTCACCAAGAACAATGCCAAGCAAGCCAAGGCGCTGGTCGACGTACTCCGAGAAGCTAATC 19 6001606 0.950158793 9 17 77 0.863636364 1.278753601 0.045454545 0.157894737 0.272727273 19 3 0 19 3R:6001560-6001646 6 Rm62 FBtr0309320|FBtr0309319|FBtr0309321|FBtr0309322 6000424|6000429|6000429|6000429 6002646|6003646|6003027|6002635 CAATGC 6mer3-8 dme-miR-33-5p 3R - 6001570 6001652 5'utr Rm62 FlyBase G36613.1 GATCCAACACAAAGGGCACCTCTTTCGCCTTCTTCACCAAGAACAATGCCAAGCAAGCCAAGGCGCTGGTCGACGTACTCCGA 11 6001620 0.934921823 5 10 38 0.866666667 1.113943352 0.133333333 0.363636364 0.533333333 11 2 0 13 3R:6001570-6001652 6 6.5 3445 FBgn0003261 4149.96 168.6633333 258.5433333 0.00156628 0.038538311 0.025140853 -3 11 4 0.15 dme-miR-1012-3p 7mer-m8 TTGACTA 3R 6001700 6001706 - 3R_6001700_6001706_- 0.548900665 0.529041804 0.538971234 0.014042363 Rm62 FBtr0309321|FBtr0309322|FBtr0309320|FBtr0309319 6000429|6000429|6000424|6000429 6003027|6002635|6002646|6003646 3R - 6001688 6001735 5'utr Rm62 FlyBase G48508.1 CGTGGACGGCATCAAGTATGTCATCAACTTTGACTACCCGCAAAACAG 16 6001706 0.971660604 3 16 96 1 1.230448921 0.176470588 0.0625 0.117647059 16 0 0 17 3R:6001688-6001735 7 Rm62 FBtr0309320|FBtr0309319|FBtr0309321|FBtr0309322 6000424|6000429|6000429|6000429 6002646|6003646|6003027|6002635 TTGACTA 7mer-m8 dme-miR-1012-3p 3R - 6001690 6001734 5'utr Rm62 FlyBase G36614.1 GTGGACGGCATCAAGTATGTCATCAACTTTGACTACCCGCAAAAC 17 6001706 0.974502547 4 16 98 0.913043478 0.84509804 0.130434783 0.294117647 0.47826087 17 0 2 21 3R:6001690-6001734 7 16 3446 FBgn0003261 4149.96 168.6633333 258.5433333 0.003855459 0.094863535 0.061885177 0 0 0 0.15 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 6359603 6359608 + 3R_6359603_6359608_+ 0.994189207 0.999999995 0.997094601 0.004108856 Pak FBtr0334543|FBtr0334544|FBtr0081716|FBtr0334539|FBtr0334542|FBtr0081714|FBtr0334540|FBtr0081715|FBtr0334541 6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464 6361614|6361614|6360248|6360248|6361614|6360248|6360248|6360248|6360050 3R + 6359557 6359637 3'utr Pak FlyBase G40562.1 AACACCAACCACAATAGCAACAATAACTGTTATGCATACGAACAGATGATGAATTATTAATGATTATGAGTACTATTATTA 14 6359603 0.974891896 7 14 84 1 1.322219295 0.047619048 0.428571429 0.619047619 14 0 0 21 3R:6359557-6359637 6 Pak FBtr0081715|FBtr0334541|FBtr0081714|FBtr0334540|FBtr0334539|FBtr0334542|FBtr0334543|FBtr0334544|FBtr0081716 6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464 6360248|6360050|6360248|6360248|6360248|6361614|6361614|6361614|6360248 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R + 6359554 6359644 3'utr Pak FlyBase G30615.1 AACAACACCAACCACAATAGCAACAATAACTGTTATGCATACGAACAGATGATGAATTATTAATGATTATGAGTACTATTATTAATTATTT 7 6359603 0.97256129 5 7 48 1 1.079181246 0.083333333 0.571428571 0.75 7 0 0 12 3R:6359554-6359644 6 7 3447 FBgn0267698 1697.123333 60.89666667 93.02666667 0.004124627 0.11494882 0.075247241 0 0 0 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 6360006 6360013 + 3R_6360006_6360013_+ 0.608632688 0.610036277 0.609334483 0.000992495 Pak FBtr0334543|FBtr0334544|FBtr0081716|FBtr0334539|FBtr0334542|FBtr0081714|FBtr0334540|FBtr0081715|FBtr0334541 6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464 6361614|6361614|6360248|6360248|6361614|6360248|6360248|6360248|6360050 3R + 6359958 6360028 3'utr Pak FlyBase G40564.1 CACACACACTATAGTTGTCAACATTAAAACATTAGAATTTGTAACTCTTGCATTTAAAGGAAATGAAAATA 121 6360005 0.767290277 6 120 962 0.993710692 2.198657087 0.528301887 0.223140496 0.408805031 121 1 0 158 3R:6359958-6360028 8 Pak FBtr0081715|FBtr0334541|FBtr0081714|FBtr0334540|FBtr0334539|FBtr0334542|FBtr0334543|FBtr0334544|FBtr0081716 6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464 6360248|6360050|6360248|6360248|6360248|6361614|6361614|6361614|6360248 TGCATTTA 8mer-A1 dme-miR-277-3p 3R + 6359989 6360028 3'utr Pak FlyBase G30616.1 TTAGAATTTGTAACTCTTGCATTTAAAGGAAATGAAAATA 84 6360005 0.751355944 5 84 635 1 2.100370545 0.595238095 0.345238095 0.563492063 84 0 0 126 3R:6359989-6360028 8 100 3448 FBgn0267698 1697.123333 60.89666667 93.02666667 0.058923237 1.642126006 1.074960585 1 1 1 0.15 dme-miR-2a-2-5p 7mer-A1 GATGAGA 3R 6387375 6387381 + 3R_6387375_6387381_+ 0.730969799 0.742876518 0.736923159 0.008419308 godzilla FBtr0081721|FBtr0081720|FBtr0113198|FBtr0081722 6387311|6387311|6387311|6387311 6388304|6387789|6388304|6388304 3R + 6387282 6387401 stop_codon godzilla FlyBase G40600.1 CAGCGCATCCGATCGCCAGTTTCTCATATGAGGCGAGCTAGTTCGCCGCGAGTCCTTAGCCTGTAGGTTGTAGGTGGTCGTCGATCCTTGAGAGATGAGACATGAGCCCAGCCTGGGTAC 171 6387377 0.959577819 14 166 776 0.970588235 1.819543936 0.416666667 0.152046784 0.289215686 171 4 2 198 3R:6387282-6387401 7 godzilla FBtr0081722|FBtr0113198|FBtr0081720|FBtr0081721 6387311|6387311|6387311|6387311 6388304|6388304|6387789|6388304 GATGAGA 7mer-A1 dme-miR-2a-2-5p 3R + 6387292 6387402 stop_codon godzilla FlyBase G30640.1 GATCGCCAGTTTCTCATATGAGGCGAGCTAGTTCGCCGCGAGTCCTTAGCCTGTAGGTTGTAGGTGGTCGTCGATCCTTGAGAGATGAGACATGAGCCCAGCCTGGGTACG 132 6387377 0.950809593 13 130 640 0.981220657 2.320146286 0.408450704 0.431818182 0.647887324 132 4 0 209 3R:6387292-6387402 7 99 3449 FBgn0037442 1202.333333 48.23 73.77 0.082339895 2.052664317 1.342008947 -2 -2 -2 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3R 6387608 6387614 + 3R_6387608_6387614_+ 0.521223087 0.521223322 0.521223205 1.41E-07 godzilla FBtr0081721|FBtr0081720|FBtr0113198|FBtr0081722 6387311|6387311|6387311|6387311 6388304|6387789|6388304|6388304 3R + 6387555 6387641 3'utr godzilla FlyBase G40601.1 AATCCACACAGACACGATACACACACACGCGTCATTTATGTGCGTATAGAAATTGTGATTTATTTTATATACATTTTACAATTAACC 725 6387614 0.991288275 16 718 7646 0.992027335 2.4628969 0.002277904 0.172413793 0.316628702 725 5 2 871 3R:6387555-6387641 7 godzilla FBtr0081722|FBtr0113198|FBtr0081720|FBtr0081721 6387311|6387311|6387311|6387311 6388304|6388304|6387789|6388304 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 6387570 6387632 3'utr godzilla FlyBase G30642.1 GATACACACACACGCGTCATTTATGTGCGTATAGAAATTGTGATTTATTTTATATACATTTTA 452 6387614 0.991809986 15 435 4792 0.958778626 1.651831608 0 0.340707965 0.545038168 452 14 13 628 3R:6387570-6387632 7 585.5 3450 FBgn0037442 1202.333333 48.23 73.77 0.486969781 12.13974705 7.93683069 -6 -6 -6 0.15 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 3R 6387752 6387758 + 3R_6387752_6387758_+ 0.823349523 0.798813023 0.811081273 0.017349926 godzilla FBtr0081721|FBtr0081720|FBtr0113198|FBtr0081722 6387311|6387311|6387311|6387311 6388304|6387789|6388304|6388304 3R + 6387656 6387779 3'utr godzilla FlyBase G40602.1 CGAAATACAGCCTCGCCGGCAAACTCCCAACCAAAAATGTAAACGATAGATGGAAGAGAAAAAATACCAAGTTACCACATCTAAGATTAAATTGTTTACCTGATTCGCATGAATCTTTGATTCA 34 6387759 0.907605931 15 34 184 1 1.633468456 0.139534884 0.205882353 0.372093023 34 0 0 43 3R:6387656-6387779 7 godzilla FBtr0081722|FBtr0113198|FBtr0081720|FBtr0081721 6387311|6387311|6387311|6387311 6388304|6388304|6387789|6388304 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R + 6387664 6387765 3'utr godzilla FlyBase G30643.1 AGCCTCGCCGGCAAACTCCCAACCAAAAATGTAAACGATAGATGGAAGAGAAAAAATACCAAGTTACCACATCTAAGATTAAATTGTTTACCTGATTCGCAT 19 6387759 0.978322026 6 17 109 0.931034483 1.130333768 0.482758621 0.368421053 0.586206897 19 1 1 27 3R:6387664-6387765 7 12.5 3451 FBgn0037442 1202.333333 48.23 73.77 0.010396451 0.259174787 0.169445574 -7 -7 -7 0.15 dme-miR-318-3p 6mer2-7 CCAGTG 3R 6447767 6447772 + 3R_6447767_6447772_+ 0.767212069 0.841951063 0.804581566 0.052848454 gpp FBtr0303790|FBtr0303789 6445700|6447492 6449274|6448007 3R + 6447606 6447792 3'utr gpp FlyBase G40636.1 CGGATCGGATCCCGGATCCTCGGAATTGTAATGTATTTGATAAAAGATTTTTTGTAATTTTAACTAAATGAATTGTGTATGACTAGCTAACTTATTGTAAGGCCCAGCTCTCCAATTGCCTTGTTTTATTTGATAATTACTATCCAACAGCTCCCCTTTCACCAGTGTGTTTTTATTTCATTAATAA 60 6447771 0.822785208 21 58 501 0.970149254 1.511883361 0.253731343 0.116666667 0.208955224 60 1 1 65 3R:6447606-6447792 6 gpp FBtr0303789|FBtr0303790 6447492|6445700 6448007|6449274 CCAGTG 6mer2-7 dme-miR-318-3p 3R + 6447749 6447790 3'utr gpp FlyBase G30671.1 CCAACAGCTCCCCTTTCACCAGTGTGTTTTTATTTCATTAAT 13 6447772 0.735392747 5 12 139 0.954545455 1.322219295 0 0.461538462 0.681818182 13 1 0 21 3R:6447749-6447790 6 14 3452 FBgn0264495 828.5133333 12.03333333 18.53 0.016897737 1.163434903 0.75553157 -4 -5 -4.5 0.15 dme-miR-7-5p 6mer2-7 TCTTCC 3R 6451458 6451463 - 3R_6451458_6451463_- 0.988828568 0.921601651 0.955215109 0.047536597 CG9727 FBtr0330193 6449942 6451848 3R - 6451310 6451483 3'utr CG9727 FlyBase G48570.1 AAACCCTCAACAAAATCCAATCTTCCCTCTGTTTAAACTAATCAACAGCTTAACTGTGCCTCTTATTGGTTTCAAAAGTGTCCAACATCATTAGAGGTGTGAGCTTGAGCCGACTTCTTTAATCTAACGTTACCCTCAGGCCTTGTTGTATGTATGCAATTGGCATATTGTTAT 23 6451461 0.976584383 13 23 157 1 1.414973348 0.038461538 0.130434783 0.230769231 23 0 0 26 3R:6451310-6451483 6 CG9727 FBtr0330193 6449942 6451848 TCTTCC 6mer2-7 dme-miR-7-5p 3R - 6451395 6451476 3'utr CG9727 FlyBase G36653.1 CAACAAAATCCAATCTTCCCTCTGTTTAAACTAATCAACAGCTTAACTGTGCCTCTTATTGGTTTCAAAAGTGTCCAACATC 13 6451461 0.984460764 5 13 104 1 1.301029996 0 0.384615385 0.6 13 0 0 20 3R:6451395-6451476 6 9 3453 FBgn0037445 1232.88 23.59333333 36.24666667 0.007299981 0.38146369 0.248298694 -2 -2 -2 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 6656385 6656390 - 3R_6656385_6656390_- 0.994317598 0.999961929 0.997139763 0.003991123 CG1307 FBtr0346140|FBtr0346140|FBtr0346140|FBtr0301623|FBtr0301623|FBtr0301623|FBtr0339933|FBtr0339933|FBtr0339933 6656028|6656028|6656028|6656288|6656288|6656288|6656288|6656288|6656288 6656521|6656521|6656521|6656521|6656521|6656521|6656521|6656521|6656521 3R - 6656357 6656412 3'utr CG1307 FlyBase G48589.2 AAGGCCACCGGGTGGAGGACGACTGTGACATGCAAGCTAAGCTAAGATTTACGTTA 39 6656383 0.817325859 3 37 131 0.977272727 1.33243846 0.431818182 0.102564103 0.204545455 39 0 1 43 3R:6656357-6656412 6 CG1307 FBtr0339933|FBtr0339933|FBtr0339933|FBtr0346140|FBtr0346140|FBtr0346140|FBtr0301623|FBtr0301623|FBtr0301623 6656288|6656288|6656288|6656028|6656028|6656028|6656288|6656288|6656288 6656521|6656521|6656521|6656521|6656521|6656521|6656521|6656521|6656521 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 6656367 6656412 3'utr CG1307 FlyBase G36665.1 AAGGCCACCGGGTGGAGGACGACTGTGACATGCAAGCTAAGCTAAG 23 6656385 0.755450089 3 23 73 1 1.51851394 0.454545455 0.347826087 0.545454545 23 0 0 33 3R:6656367-6656412 6 30 3454 FBgn0026566 301 40.07666667 61.29666667 0.099667774 0.74856525 0.489423025 -7 -5 -6 0.15 dme-miR-970-3p 6mer3-8 TCTTAT 3R 6659303 6659308 + 3R_6659303_6659308_+ 0.938589166 0.879246811 0.908917989 0.041961413 twr FBtr0081687 6659291 6659442 3R + 6659260 6659322 stop_codon twr FlyBase G40671.1 TTGGCCATTTTCGTGCTGCTGCATCGGGAGTAGATGGGATCGCTCTTATTTTGTAGGTACAGT 43 6659305 0.970587357 9 42 326 0.980769231 1.707570176 0.115384615 0.162790698 0.307692308 43 1 0 51 3R:6659260-6659322 6 twr FBtr0081687 6659291 6659442 TCTTAT 6mer3-8 dme-miR-970-3p 3R + 6659276 6659383 stop_codon twr FlyBase G30697.2 TGCTGCATCGGGAGTAGATGGGATCGCTCTTATTTTGTAGGTACAGTTTATAAGTAGGAAGTGCACAATCTCGAGCCTGTCTGCATTTTCAAATTCCTTACCACCCCA 31 6659305 0.986210845 9 29 229 0.975609756 1.602059991 0.195121951 0.225806452 0.414634146 31 1 0 40 3R:6659276-6659383 6 31 3455 FBgn0262801 451 66.07666667 100.2333333 0.068736142 0.469151995 0.309278351 -2 -2 -2 0.15 dme-miR-307a-3p 6mer3-8 GGTTGT 3R 7071118 7071123 + 3R_7071118_7071123_+ 0.999965644 0.937903832 0.968934738 0.04388432 CG1965 FBtr0305315|FBtr0334667 7069195|7068710 7071624|7071624 3R + 7071002 7071129 3'utr CG1965 FlyBase G40693.1 TGAGCTGGCGATTGGAGCCCTTCTGAATCGTTACCTGTTATTAGCTATGCGAGTCTGCACGCCAAACGATGCCATAAACAAAGCTTACATCATTGTAAATACCCTGCCTACAGTCTGGTTGTTACCGA 21 7071101 0.982783051 13 21 157 1 1.447158031 0.464285714 0.19047619 0.392857143 21 0 0 28 3R:7071002-7071129 6 CG1965 FBtr0334667|FBtr0305315 7068710|7069195 7071624|7071624 GGTTGT 6mer3-8 dme-miR-307a-3p 3R + 7071093 7071124 3'utr CG1965 FlyBase G30716.1 ATTGTAAATACCCTGCCTACAGTCTGGTTGTT 5 7071101 0.804742438 2 5 30 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 3R:7071093-7071124 6 5.5 3456 FBgn0037466 426.6666667 16.45666667 25.25333333 0.012890625 0.334211059 0.217793031 17 17 17 0.15 dme-miR-305-3p 6mer2-7 TGTGCC 3R 7077298 7077303 + 3R_7077298_7077303_+ 0.529413598 0.504504149 0.516958874 0.017613676 CG1943 FBtr0334668 7077274 7077981 3R + 7077202 7077341 stop_codon CG1943 FlyBase G40698.1 AACCAGCGGCCACAAATGGAGAGGCACGCGGCCGAGTTCCACCCGGCGGATTCTCGTCGGGCGGATTCTGGTAGAGGGAGGAAGGAGGGAAGGAAGTGTGCCCGGGAGCAGAAGCAGCTGCCAAGCATTTAATGACTCAC 491 7077300 0.927344079 12 469 715 0.972627737 1.823637222 0.386861314 0.097759674 0.191605839 491 8 7 533 3R:7077202-7077341 6 CG1943 FBtr0334668 7077274 7077981 TGTGCC 6mer2-7 dme-miR-305-3p 3R + 7077273 7077411 stop_codon CG1943 FlyBase G30722.1 TAGAGGGAGGAAGGAGGGAAGGAAGTGTGCCCGGGAGCAGAAGCAGCTGCCAAGCATTTAATGACTCACCATCACATCCTCAGACCGACATAAGAATCATAAAACTATAAATATACATAACTCGCTTATAACATACGTA 385 7077300 0.92151699 14 379 672 0.98630137 2.158362492 0.356164384 0.363636364 0.580479452 385 5 3 576 3R:7077273-7077411 6 373.5 3457 FBgn0037468 4211.24 509.6133333 779.24 0.088691217 0.73290861 0.479313177 -2 -2 -2 0.15 dme-miR-965-3p 7mer-m8 TACGCTT 3R 7088652 7088658 + 3R_7088652_7088658_+ 0.620187369 0.619986558 0.620086963 0.000141987 alphaTub84B FBtr0081639 7088582 7088839 3R + 7088590 7088691 3'utr alphaTub84B FlyBase G40713.1 CGCCACTTCAACGCTCGATGGGAGCGTCATTGGTGGGCGGGGTAACCGTCGAAATCAGTGTTTACGCTTCCAATCGCAACAAAAAATTCACTGCAACACTGA 27 7088651 0.787850221 12 25 138 0.967741935 1.477121255 0.225806452 0.148148148 0.258064516 27 1 0 30 3R:7088590-7088691 7 alphaTub84B FBtr0081639 7088582 7088839 TACGCTT 7mer-m8 dme-miR-965-3p 3R + 7088620 7088664 3'utr alphaTub84B FlyBase G30737.1 TGGTGGGCGGGGTAACCGTCGAAATCAGTGTTTACGCTTCCAATC 8 7088651 0.741372395 4 8 47 1 1.041392685 0.090909091 0.375 0.545454545 8 0 0 11 3R:7088620-7088664 7 10 3458 FBgn0003884 10969.09667 757.73 1153.946667 0.000911652 0.013197313 0.008665912 1 1 1 0.15 dme-miR-8-3p 6mer2-7 AGTATT 3R 7088733 7088738 + 3R_7088733_7088738_+ 0.989687608 0.900235708 0.944961658 0.063252045 alphaTub84B FBtr0081639 7088582 7088839 3R + 7088711 7088840 3'utr alphaTub84B FlyBase G40714.1 AAGATTGTACGAGAAACCATAAAGTATTTTATCCACAAAGACACGTATAGCAGAAAAGCCAAGTTAACTCGGCGATAAGTTGTGTACACAAGAATAAAATCGGCCAGATTCAGTGTTGTCAGAAATAAGA 95 7088739 0.829249804 18 90 530 0.96031746 1.781755375 0.174603175 0.2 0.396825397 95 4 1 121 3R:7088711-7088840 6 alphaTub84B FBtr0081639 7088582 7088839 AGTATT 6mer2-7 dme-miR-8-3p 3R + 7088715 7088836 3'utr alphaTub84B FlyBase G30738.1 TTGTACGAGAAACCATAAAGTATTTTATCCACAAAGACACGTATAGCAGAAAAGCCAAGTTAACTCGGCGATAAGTTGTGTACACAAGAATAAAATCGGCCAGATTCAGTGTTGTCAGAAAT 52 7088739 0.965984233 13 49 290 0.961038961 1.86923172 0.142857143 0.365384615 0.571428571 52 3 0 74 3R:7088715-7088836 6 42.5 3459 FBgn0003884 10969.09667 757.73 1153.946667 0.003874521 0.05608858 0.036830125 -6 -6 -6 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 7097964 7097971 - 3R_7097964_7097971_- 0.623928439 0.624739151 0.624333795 0.000573322 Alh FBtr0334672|FBtr0081613|FBtr0081612|FBtr0113200|FBtr0334677|FBtr0081614|FBtr0334673 7097681|7097681|7097681|7097681|7097681|7097681|7097681 7098310|7098310|7098310|7098310|7098310|7098310|7098310 3R - 7097949 7098053 3'utr Alh FlyBase G48633.2 AAATAATGTACATATATACATACACAGCTGTAAATCAAATTACAGATTGTTGCACAAAAGCAGTGATTGAGAAATTATCCATTGCATTTATCGACTACATTGACA 94 7097972 0.80524409 11 93 737 0.973913043 2.049218023 0.252173913 0.170212766 0.32173913 94 3 0 112 3R:7097949-7098053 8 Alh FBtr0334673|FBtr0334677|FBtr0081614|FBtr0081612|FBtr0113200|FBtr0334672|FBtr0081613 7097681|7097681|7097681|7097681|7097681|7097681|7097681 7098310|7098310|7098310|7098310|7098310|7098310|7098310 TGCATTTA 8mer-A1 dme-miR-277-3p 3R - 7097947 7098012 3'utr Alh FlyBase G36708.1 ACAGATTGTTGCACAAAAGCAGTGATTGAGAAATTATCCATTGCATTTATCGACTACATTGACAAC 68 7097972 0.772359325 9 64 524 0.962962963 1.716003344 0.25 0.411764706 0.62962963 68 3 1 104 3R:7097947-7098012 8 65 3460 FBgn0261238 489.5366667 11.73666667 17.96333333 0.132778614 5.538199375 3.618482093 1 1 1 0.15 dme-miR-1006-3p 6mer2-7 GAATTT 3R 7126736 7126741 - 3R_7126736_7126741_- 0.975878277 0.998131294 0.987004785 0.015735247 CG10068 FBtr0081611 7126269 7126771 3R - 7126705 7126756 3'utr CG10068 FlyBase G48646.1 AATTAATGTGAAAATGAATTTGTATCTCGCTGTATCTGAATAATTTCTAACT 20 7126736 0.903672223 7 19 173 0.958333333 1.361727836 0.333333333 0.2 0.333333333 20 1 0 23 3R:7126705-7126756 6 CG10068 FBtr0081611 7126269 7126771 GAATTT 6mer2-7 dme-miR-1006-3p 3R - 7126707 7126760 3'utr CG10068 FlyBase G36713.1 GGTCAATTAATGTGAAAATGAATTTGTATCTCGCTGTATCTGAATAATTTCTAA 8 7126726 0.983427133 6 8 65 1 1 0.3 0.25 0.4 8 0 0 10 3R:7126707-7126760 6 12.5 3461 FBgn0037473 157.0666667 11.75666667 18.12 0.079584041 1.063226538 0.689845475 -5 -15 -10 0.15 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3R 7184145 7184151 - 3R_7184145_7184151_- 0.620115042 0.614687315 0.617401178 0.003837963 CG10055 FBtr0081605 7184099 7184593 3R - 7184126 7184288 3'utr CG10055 FlyBase G48673.1 ACTTCGATTATAATTACACATACAAGTAAATCAGAACTTTAGCATTTAGTATGGCATTAGAGTATGAAACATTTGAATTTTGAATTCTGAAAAGCGAAATCTAGTTGTGCATTTGTATATACATCTATCGATATTGTTGGTGCTGCAAGCAAAGAAAACAAAA 34 7184152 0.975699461 20 33 221 1 1.602059991 0.2 0.147058824 0.275 34 0 0 40 3R:7184126-7184288 7 CG10055 FBtr0081605 7184099 7184593 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3R - 7184109 7184166 3'utr CG10055 FlyBase G36734.1 ATCTATCGATATTGTTGGTGCTGCAAGCAAAGAAAACAAAATATGAATAAAATAAAAT 12 7184152 0.980778745 4 12 83 1 1.204119983 0.4375 0.25 0.4375 12 0 0 16 3R:7184109-7184166 7 14 3462 FBgn0037482 992.8933333 50.03666667 76.9 0.014100205 0.279794817 0.182054616 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 7194832 7194838 + 3R_7194832_7194838_+ 0.693056761 0.63810197 0.665579365 0.038858912 lap FBtr0305153|FBtr0305153|FBtr0305153 7194510|7194510|7194510 7195358|7195358|7195358 3R + 7194794 7194843 3'utr lap FlyBase G40755.1 GGAAAAAAGTATTTAATGTGTGTTTCATGTGATAACTGTGTGATAACTAT 6 7194829 0.989990095 4 5 45 0.9 0.653212514 0.1 0.333333333 0.6 6 0 1 9 3R:7194794-7194843 7 lap FBtr0305153|FBtr0305153|FBtr0305153 7194510|7194510|7194510 7195358|7195358|7195358 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 7194810 7194843 3'utr lap FlyBase G30764.1 TGTGTGTTTCATGTGATAACTGTGTGATAACTAT 5 7194830 0.97987106 3 5 40 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 3R:7194810-7194843 7 5 3463 FBgn0086372 620.47 21.26666667 32.51 0.008058407 0.235109718 0.153798831 3 2 2.5 0.15 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 7494731 7494738 - 3R_7494731_7494738_- 0.579581901 0.56923377 0.574407835 0.007317212 alpha-Est9 FBtr0302354|FBtr0302355 7494095|7493919 7495070|7495070 3R - 7494720 7494844 3'utr alpha-Est9 FlyBase G48710.1 TGCCCAACAGACTTATTTTTGGCAAGAATGATAAGTGAACCCACCCTAACCTTTTACGATTGGAAAAGCTTTACGTTGAAGCCTATGTTTGAAACAATGCAAAGCGTAGCTTTAGACATAAAATA 29 7494733 0.775250315 13 25 159 0.871794872 1.054357662 0.153846154 0.275862069 0.461538462 29 3 2 34 3R:7494720-7494844 8 alpha-Est9 FBtr0302355|FBtr0302354 7493919|7494095 7495070|7495070 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R - 7494680 7494749 3'utr alpha-Est9 FlyBase G36761.1 AATGCAAAGCGTAGCTTTAGACATAAAATATGAGAGTTTATTGTTAAGTTTGTCAACGAGAAGAAGAGTT 13 7494733 0.978001703 4 9 64 0.789473684 1.176091259 0.157894737 0.307692308 0.526315789 13 4 0 15 3R:7494680-7494749 8 11 3464 FBgn0015577 852.0066667 30.18666667 46.17 0.012910697 0.364399293 0.238249946 -5 -5 -5 0.15 dme-miR-92b-3p 7mer-m1 TGCAATT 3R 7519662 7519668 - 3R_7519662_7519668_- 0.765586659 0.765586663 0.765586661 0 alpha-Est7 FBtr0081550 7519561 7519750 3R - 7519642 7519730 3'utr alpha-Est7 FlyBase G48721.1 CAGCCTAACAAAGAAGTCTCTAGAAACTGTAAATAGGTCAAAATGCTTTATAAAATATATTCTGCAATTGGATTGTTTTGCTTTATAAC 41 7519680 0.818083473 13 39 298 0.96 1.380211242 0.06 0.219512195 0.36 41 1 1 48 3R:7519642-7519730 7 alpha-Est7 FBtr0081550 7519561 7519750 TGCAATT 7mer-m1 dme-miR-92b-3p 3R - 7519614 7519734 3'utr alpha-Est7 FlyBase G36770.1 TGTACAGCCTAACAAAGAAGTCTCTAGAAACTGTAAATAGGTCAAAATGCTTTATAAAATATATTCTGCAATTGGATTGTTTTGCTTTATAACTAGTTTGCCCAATGATTGCATGTGGATG 28 7519682 0.982265086 12 27 210 1 1.612783857 0.097560976 0.25 0.487804878 28 0 0 41 3R:7519614-7519734 7 7.5 3465 FBgn0015575 416.1433333 24.78333333 37.7 0.018022636 0.30262273 0.198938992 12 14 13 0.15 dme-miR-34-5p 7mer-m8 CACTGCC 3R 7857595 7857601 - 3R_7857595_7857601_- 0.70895328 0.708947693 0.708950486 3.96E-06 CG17816 FBtr0333829|FBtr0113202 7855585|7855580 7858911|7858173 3R - 7857585 7857611 3'utr CG17816 FlyBase G48753.1 AAGACACTTTCACTGCCTGAACCCAAT 6 7857594 0.904793495 3 6 25 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 3R:7857585-7857611 7 CG17816 FBtr0113202|FBtr0333829 7855580|7855585 7858173|7858911 CACTGCC 7mer-m8 dme-miR-34-5p 3R - 7857586 7857611 3'utr CG17816 FlyBase G36796.1 AAGACACTTTCACTGCCTGAACCCAA 5 7857594 0.941084292 2 4 19 0.818181818 0.954242509 0.181818182 0.8 0.909090909 5 2 0 9 3R:7857586-7857611 7 5.5 3466 FBgn0037525 90 2.533333333 3.903333333 0.061111111 2.171052632 1.409052092 -7 -7 -7 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 7916011 7916016 + 3R_7916011_7916016_+ 0.999243187 0.999999779 0.999621483 0.000534997 CG2678 FBtr0304703 7915277 7916550 3R + 7915987 7916040 3'utr CG2678 FlyBase G40816.1 ATCGCCAACATCATCTTAAAAAATGTACCTATTGTTCCGAGGAGTTCAAAACAG 20 7916010 0.855888185 5 20 173 1 1.361727836 0.130434783 0.15 0.260869565 20 0 0 23 3R:7915987-7916040 6 CG2678 FBtr0304703 7915277 7916550 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 7915992 7916039 3'utr CG2678 FlyBase G30806.1 CAACATCATCTTAAAAAATGTACCTATTGTTCCGAGGAGTTCAAAACA 9 7916010 0.803827853 4 9 66 1 1.176091259 0.133333333 0.222222222 0.533333333 9 0 0 15 3R:7915992-7916039 6 14.5 3467 FBgn0014931 371 24.70666667 37.91 0.039083558 0.586886131 0.382484832 1 1 1 0.15 dme-miR-283-5p 6mer3-8 TGATAT 3R 7916757 7916762 - 3R_7916757_7916762_- 0.997142335 0.999074022 0.998108178 0.001365918 CG10445 FBtr0304704 7916597 7916927 3R - 7916700 7916813 3'utr CG10445 FlyBase G48777.1 CAATTGTGTATTAATACTACACAGACTACCTTTAACGTTATACGTTACATTTGATATAGTCGCACGTCCATAAAGCATAAAGCATATATATTCCCTTTTTTTCTATATTAAGAA 67 7916757 0.969975107 12 65 373 0.974025974 1.574031268 0.402597403 0.119402985 0.233766234 67 1 1 75 3R:7916700-7916813 6 CG10445 FBtr0304704 7916597 7916927 TGATAT 6mer3-8 dme-miR-283-5p 3R - 7916723 7916798 3'utr CG10445 FlyBase G36818.1 ACTACACAGACTACCTTTAACGTTATACGTTACATTTGATATAGTCGCACGTCCATAAAGCATAAAGCATATATAT 41 7916757 0.815368837 7 38 216 0.949152542 1.447158031 0.288135593 0.243902439 0.474576271 41 2 1 56 3R:7916723-7916798 6 45.5 3468 FBgn0037531 329.1333333 12.96 20.04666667 0.138241847 3.510802469 2.269704024 -5 -5 -5 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 3R 7916841 7916847 - 3R_7916841_7916847_- 0.670756069 0.67179561 0.671275839 0.000735037 CG10445 FBtr0304704 7916597 7916927 3R - 7916823 7916853 3'utr CG10445 FlyBase G48778.1 AATTTCACCAAAGTGTTTTTTAACGGATTGA 13 7916835 0.626213475 4 13 121 1 1.176091259 0 0.076923077 0.2 13 0 0 15 3R:7916823-7916853 7 CG10445 FBtr0304704 7916597 7916927 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 7916815 7916857 3'utr CG10445 FlyBase G36819.1 TTACAATTTCACCAAAGTGTTTTTTAACGGATTGAATTCGTTT 9 7916838 0.862477825 5 7 76 1 1.079181246 0 0.333333333 0.5 9 0 0 12 3R:7916815-7916857 7 9.5 3469 FBgn0037531 329.1333333 12.96 20.04666667 0.028863682 0.733024691 0.473894247 -12 -9 -10.5 0.15 dme-miR-276a-3p 6mer2-7 GTTCCT 3R 8004459 8004464 + 3R_8004459_8004464_+ 0.888822371 0.486261931 0.687542151 0.284653259 CG2698 FBtr0308075 8003875 8005719 3R + 8004435 8004482 3'utr CG2698 FlyBase G40845.1 TACGGTTTTCGGGGCCCGGATTGTGTTCCTGCCGTCCGCCTTGGCAGC 20 8004455 0.813994194 4 18 131 0.958333333 1.06069784 0.208333333 0.15 0.291666667 20 0 1 23 3R:8004435-8004482 6 CG2698 FBtr0308075 8003875 8005719 GTTCCT 6mer2-7 dme-miR-276a-3p 3R + 8004394 8004473 3'utr CG2698 FlyBase G30830.1 AGGTGCTCCACCTTTACGGGTCTGTTCACCTGGTTAGTCCATACGGTTTTCGGGGCCCGGATTGTGTTCCTGCCGTCCGC 8 8004455 0.977426509 5 8 56 1 1 0.1 0.25 0.4 8 0 0 10 3R:8004394-8004473 6 10.5 3470 FBgn0037536 142.6833333 5.336666667 8.11 0.073589534 1.9675203 1.294697904 4 4 4 0.15 dme-miR-1008-3p 7mer-m8 AGCTGTG 3R 8005344 8005350 + 3R_8005344_8005350_+ 0.671793605 0.671791829 0.671792717 1.27E-06 CG2698 FBtr0335228|FBtr0308075|FBtr0335225|FBtr0335226|FBtr0081784 8005015|8003875|8005283|8005283|8005283 8005719|8005719|8005719|8005719|8005719 3R + 8005300 8005428 3'utr CG2698 FlyBase G40847.1 AAACTACGAATTTCCTTTTAATACTCGAACTGCGAACTAACATAAGCTGTGTGGCCAAATACCTGACAATCAAAATGAGATTGGCCCGAATATCATAACCTAGACATAGGCTGGAGCTTCCTTTAACTA 55 8005351 0.956982528 12 52 248 0.9375 1.176091259 0.03125 0.163636364 0.28125 55 1 3 60 3R:8005300-8005428 7 CG2698 FBtr0081784|FBtr0335225|FBtr0335226|FBtr0335228|FBtr0308075 8005283|8005283|8005283|8005015|8003875 8005719|8005719|8005719|8005719|8005719 AGCTGTG 7mer-m8 dme-miR-1008-3p 3R + 8005315 8005390 3'utr CG2698 FlyBase G30831.1 TTTTAATACTCGAACTGCGAACTAACATAAGCTGTGTGGCCAAATACCTGACAATCAAAATGAGATTGGCCCGAAT 39 8005351 0.956495156 10 36 170 0.93877551 1.361727836 0 0.230769231 0.387755102 39 2 1 46 3R:8005315-8005390 7 31.5 3471 FBgn0037536 142.6833333 5.336666667 8.11 0.220768602 5.902560899 3.884093711 -7 -7 -7 0.15 dme-miR-184-3p 6mer3-8 TCCGTC 3R 8005499 8005504 + 3R_8005499_8005504_+ 0.992041408 0.990423802 0.991232605 0.001143816 CG2698 FBtr0335228|FBtr0308075|FBtr0335225|FBtr0335226|FBtr0081784 8005015|8003875|8005283|8005283|8005283 8005719|8005719|8005719|8005719|8005719 3R + 8005474 8005526 3'utr CG2698 FlyBase G40848.1 TGATTTTTATGATATTATTCAATATTCCGTCTATGCAGCAAGCGCTCCTTAAT 206 8005498 0.764296872 9 196 1633 0.976095618 1.91204483 0.262948207 0.180487805 0.330677291 205 4 2 245 3R:8005474-8005526 6 CG2698 FBtr0081784|FBtr0335225|FBtr0335226|FBtr0335228|FBtr0308075 8005283|8005283|8005283|8005015|8003875 8005719|8005719|8005719|8005719|8005719 TCCGTC 6mer3-8 dme-miR-184-3p 3R + 8005475 8005527 3'utr CG2698 FlyBase G30833.1 GATTTTTATGATATTATTCAATATTCCGTCTATGCAGCAAGCGCTCCTTAATA 164 8005498 0.744289014 6 159 1264 0.9765625 2.397940009 0.22265625 0.417177914 0.62890625 163 6 0 250 3R:8005475-8005527 6 178 3472 FBgn0037536 142.6833333 5.336666667 8.11 1.247517813 33.35415365 21.94821208 1 1 1 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 8005565 8005570 + 3R_8005565_8005570_+ 0.943536457 0.815484543 0.8795105 0.090546438 CG2698 FBtr0335228|FBtr0308075|FBtr0335225|FBtr0335226|FBtr0081784 8005015|8003875|8005283|8005283|8005283 8005719|8005719|8005719|8005719|8005719 3R + 8005534 8005677 3'utr CG2698 FlyBase G40848.2 CTATCGATCTTAGTGTTCTTACATACAAAATGTACCTCGAATTATTTGTAGTCGCGAAACATTTCCAAAGCCTTCAAGTACCGATATCGTGCTCGCTACTAATTGCTTAATGTAAAATTGTGATGTGTTTAAACTTAGATACAA 272 8005564 0.895979704 21 260 2110 0.951219512 1.649056554 0.082317073 0.172794118 0.31402439 272 10 6 312 3R:8005534-8005677 6 CG2698 FBtr0081784|FBtr0335225|FBtr0335226|FBtr0335228|FBtr0308075 8005283|8005283|8005283|8005015|8003875 8005719|8005719|8005719|8005719|8005719 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 8005539 8005608 3'utr CG2698 FlyBase G30833.2 GATCTTAGTGTTCTTACATACAAAATGTACCTCGAATTATTTGTAGTCGCGAAACATTTCCAAAGCCTTC 161 8005564 0.889520069 12 158 1043 0.991701245 2.378397901 0.037344398 0.354037267 0.56846473 161 2 0 239 3R:8005539-8005608 6 161 3473 FBgn0037536 142.6833333 5.336666667 8.11 1.128372854 30.1686446 19.85203453 1 1 1 0.15 dme-miR-79-3p 6mer3-8 TAGCTT 3R 8011031 8011036 - 3R_8011031_8011036_- 0.99438345 0.995492679 0.994938065 0.000784323 CG10435 FBtr0081820 8010905 8011108 3R - 8011002 8011087 3'utr CG10435 FlyBase G48808.1 TGTACGGCCGGCTTTTACCCCCATGCCCAAACTCCGCAATCCCACCCCAATTAGCTTACAAAGATGACTCCTCTAAACGTATATTT 17 8011037 0.922857619 9 16 85 1 1.397940009 0.08 0.235294118 0.48 17 0 0 25 3R:8011002-8011087 6 CG10435 FBtr0081820 8010905 8011108 TAGCTT 6mer3-8 dme-miR-79-3p 3R - 8010999 8011039 3'utr CG10435 FlyBase G36840.1 AATTAGCTTACAAAGATGACTCCTCTAAACGTATATTTAAT 11 8011023 0.764027289 3 10 73 0.941176471 0.903089987 0 0.272727273 0.529411765 11 0 1 16 3R:8010999-8011039 6 9 3474 FBgn0037539 188.4766667 12.81 19.71666667 0.047751269 0.702576112 0.45646661 1 -13 -6 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 8036608 8036615 + 3R_8036608_8036615_+ 0.499160546 0.499230677 0.499195612 4.96E-05 unc-45 FBtr0081788 8036503 8036652 3R + 8036596 8036633 3'utr unc-45 FlyBase G40867.1 AAAATATCAAATGTACTTAACTGTTTTATAAATATTGT 57 8036607 0.861064477 3 57 512 1 1.857332496 0.097222222 0.192982456 0.361111111 57 0 0 72 3R:8036596-8036633 8 unc-45 FBtr0081788 8036503 8036652 GTACTTAA 8mer-A1 dme-miR-252-5p 3R + 8036596 8036632 3'utr unc-45 FlyBase G30845.1 AAAATATCAAATGTACTTAACTGTTTTATAAATATTG 30 8036607 0.850857656 3 30 266 1 1.612783857 0.195121951 0.266666667 0.463414634 30 0 0 41 3R:8036596-8036632 8 43.5 3475 FBgn0010812 498 18.51666667 28.27333333 0.087349398 2.349234923 1.538552228 1 1 1 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 3R 8121526 8121531 + 3R_8121526_8121531_+ 0.999988066 0.998619532 0.999303799 0.000967746 puc FBtr0081792|FBtr0339722 8121334|8121334 8122294|8122294 3R + 8121515 8121562 3'utr puc FlyBase G40882.2 AAGGAATTTTTTACCTGGCTGAAAAAATTTAGATTTTATTAAGTCAGA 26 8121526 0.683281508 9 23 210 0.90625 1.161368002 0.15625 0.115384615 0.28125 26 2 1 29 3R:8121515-8121562 6 puc FBtr0081792|FBtr0339722 8121334|8121334 8122294|8122294 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 3R + 8121506 8121594 3'utr puc FlyBase G30855.1 ACTGAAACTAAGGAATTTTTTACCTGGCTGAAAAAATTTAGATTTTATTAAGTCAGAAACGGCGAGAGGGCTGATACTTCCTATTAAAC 15 8121530 0.983019731 7 14 107 0.95 1.278753601 0.1 0.333333333 0.5 15 1 0 19 3R:8121506-8121594 6 16.5 3476 FBgn0243512 1835.12 76.61666667 117.5466667 0.008991238 0.215357842 0.140369782 0 -4 -2 0.15 dme-miR-980-3p 6mer2-7 GCAGCT 3R 8121709 8121714 + 3R_8121709_8121714_+ 0.996515843 0.994724283 0.995620063 0.001266782 puc FBtr0081792|FBtr0339722 8121334|8121334 8122294|8122294 3R + 8121640 8121751 3'utr puc FlyBase G40883.1 ATAAAAACGTTCAATATCTGTACATACAAACGTACCTAAAACAAAACACAAGGGAAAGAAATACCAATTGCAGCTTAAACTATGTACTTGCAATACCTTTTAAGAGCTTTTG 101 8121707 0.801135091 13 99 543 0.982905983 2.06069784 0.076923077 0.148514851 0.264957265 101 2 0 115 3R:8121640-8121751 6 puc FBtr0081792|FBtr0339722 8121334|8121334 8122294|8122294 GCAGCT 6mer2-7 dme-miR-980-3p 3R + 8121688 8121746 3'utr puc FlyBase G30857.1 CAAGGGAAAGAAATACCAATTGCAGCTTAAACTATGTACTTGCAATACCTTTTAAGAGC 56 8121707 0.802543346 7 53 288 1 1.908485019 0.024691358 0.303571429 0.518518519 56 0 0 81 3R:8121688-8121746 6 63 3477 FBgn0243512 1835.12 76.61666667 117.5466667 0.03433018 0.822275397 0.53595735 2 2 2 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 3R 8122148 8122153 + 3R_8122148_8122153_+ 0.945202998 0.999106916 0.972154957 0.038115813 puc FBtr0081792|FBtr0339722 8121334|8121334 8122294|8122294 3R + 8122096 8122210 3'utr puc FlyBase G40887.1 TCCGCTATAGCCACTCTAATAGTTTAGTTACTTCTTGAAAGTGAAAAAAGTTTGTGTTTTCTAGTTTTAATTATTTATATGAAGCGAGTGTGTGAGAGGATTATGATTCATTTCG 53 8122147 0.983405532 19 50 439 0.953125 1.785329835 0.234375 0.150943396 0.296875 53 3 0 61 3R:8122096-8122210 6 puc FBtr0081792|FBtr0339722 8121334|8121334 8122294|8122294 TGTGTT 6mer3-8 dme-miR-317-3p 3R + 8122123 8122168 3'utr puc FlyBase G30860.1 TTACTTCTTGAAAGTGAAAAAAGTTTGTGTTTTCTAGTTTTAATTA 6 8122146 0.986585453 4 6 59 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3R:8122123-8122168 6 13 3478 FBgn0243512 1835.12 76.61666667 117.5466667 0.007084005 0.169675876 0.110594374 1 2 1.5 0.15 dme-miR-1003-3p 7mer-A1 TGTGAGA 3R 8122186 8122192 + 3R_8122186_8122192_+ 0.781618947 0.82067549 0.801147218 0.027617187 puc FBtr0081792|FBtr0339722 8121334|8121334 8122294|8122294 3R + 8122096 8122210 3'utr puc FlyBase G40887.1 TCCGCTATAGCCACTCTAATAGTTTAGTTACTTCTTGAAAGTGAAAAAAGTTTGTGTTTTCTAGTTTTAATTATTTATATGAAGCGAGTGTGTGAGAGGATTATGATTCATTTCG 53 8122184 0.983405532 19 50 439 0.953125 1.785329835 0.234375 0.150943396 0.296875 53 3 0 61 3R:8122096-8122210 7 puc FBtr0081792|FBtr0339722 8121334|8121334 8122294|8122294 TGTGAGA 7mer-A1 dme-miR-1003-3p 3R + 8122171 8122227 3'utr puc FlyBase G30861.1 TATATGAAGCGAGTGTGTGAGAGGATTATGATTCATTTCGTATTAGATCGTAAGTCT 13 8122184 0.959462383 7 13 72 1 1.361727836 0.304347826 0.461538462 0.695652174 13 0 0 23 3R:8122171-8122227 7 17 3479 FBgn0243512 1835.12 76.61666667 117.5466667 0.009263699 0.221883837 0.144623412 2 2 2 0.15 dme-miR-31a-5p 7mer-A1 CTTGCCA 3R 8125187 8125193 + 3R_8125187_8125193_+ 0.822491264 0.823118235 0.82280475 0.000443285 CG7878 FBtr0113205 8125137 8125273 3R + 8125168 8125217 3'utr CG7878 FlyBase G40902.1 CTAGAGCGCATTGAAGTGCCTTGCCAAAAATTGTTTAACTATTTATCTAT 27 8125189 0.869886937 2 26 202 0.96875 1.491361694 0.0625 0.148148148 0.28125 27 1 0 31 3R:8125168-8125217 7 CG7878 FBtr0113205 8125137 8125273 CTTGCCA 7mer-A1 dme-miR-31a-5p 3R + 8125153 8125215 3'utr CG7878 FlyBase G30869.1 TCTAGTTATAAGAGACTAGAGCGCATTGAAGTGCCTTGCCAAAAATTGTTTAACTATTTATCT 23 8125189 0.981144917 5 21 155 0.972222222 1.544068044 0.111111111 0.391304348 0.611111111 23 1 0 35 3R:8125153-8125215 7 24 3480 FBgn0037549 1708.053333 87.89666667 135.3866667 0.014051083 0.273047897 0.177270041 -2 -2 -2 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3R 8237061 8237066 + 3R_8237061_8237066_+ 0.897787408 0.908095043 0.902941225 0.007288574 DNApol-iota FBtr0339606 8236542 8237389 3R + 8237039 8237076 3'utr DNApol-iota FlyBase G40932.1 ACATATCCTAGCGGCATTCAGTCCAAAGCGGTCTCCCA 6 8237055 0.913980447 2 6 23 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 3R:8237039-8237076 6 DNApol-iota FBtr0339606 8236542 8237389 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 8237036 8237077 3'utr DNApol-iota FlyBase G30890.1 CTTACATATCCTAGCGGCATTCAGTCCAAAGCGGTCTCCCAG 6 8237055 0.942813978 4 5 24 1 0.954242509 0.222222222 0.333333333 0.555555556 6 0 0 9 3R:8237036-8237077 6 5.5 3481 FBgn0037554 325.21 13.97 21.14 0.016912149 0.393700787 0.260170293 6 6 6 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 3R 8237390 8237396 - 3R_8237390_8237396_- 0.620203108 0.620198235 0.620200672 3.46E-06 Ada2b FBtr0334315|FBtr0081807|FBtr0100368 8236630|8237112|8237112 8237918|8237918|8237437 3R - 8237369 8237410 3'utr Ada2b FlyBase G48853.1 GATTAAGAGCCACATGCATTTCCAAGGACTTCACTTTATTTT 13 8237394 0.985746298 6 9 76 0.714285714 1 0.071428571 0.076923077 0.142857143 13 4 0 10 3R:8237369-8237410 7 Ada2b FBtr0100368|FBtr0081807|FBtr0334315 8237112|8237112|8236630 8237437|8237918|8237918 TGCATTT 7mer-m8 dme-miR-277-3p 3R - 8237375 8237408 3'utr Ada2b FlyBase G36877.1 TTAAGAGCCACATGCATTTCCAAGGACTTCACTT 7 8237395 0.882334126 3 6 40 0.909090909 1 0.090909091 0.428571429 0.636363636 7 1 0 10 3R:8237375-8237408 7 9 3482 FBgn0037555 444.2066667 24.31 37.33666667 0.02026084 0.370218017 0.241049906 -2 -1 -1.5 0.15 dme-miR-14-3p 7mer-m8 AAGACTG 3R 8237527 8237533 - 3R_8237527_8237533_- 0.671795832 0.671795832 0.671795832 0 Ada2b FBtr0334315|FBtr0081807 8236630|8237112 8237918|8237918 3R - 8237471 8237558 3'utr Ada2b FlyBase G48854.1 TACGCCCACCACCTACCTCTCGGTTAAGACTGTCTGCTTGAGCGGAGCACCATCGTTGGGTAGTCCTATGGAGACTTCGCTGCGCAAG 34 8237534 0.946006529 12 30 235 0.880952381 1.568201724 0.119047619 0.205882353 0.357142857 34 5 0 37 3R:8237471-8237558 7 Ada2b FBtr0081807|FBtr0334315 8237112|8236630 8237918|8237918 AAGACTG 7mer-m8 dme-miR-14-3p 3R - 8237473 8237596 3'utr Ada2b FlyBase G36878.1 AGTCACAACGAGCTGGATCTGTGCAAGAAGCATAATATTACGCCCACCACCTACCTCTCGGTTAAGACTGTCTGCTTGAGCGGAGCACCATCGTTGGGTAGTCCTATGGAGACTTCGCTGCGCA 24 8237534 0.983305192 15 18 137 0.75 1.079181246 0.28125 0.25 0.4375 24 7 1 24 3R:8237473-8237596 7 21 3483 FBgn0037555 444.2066667 24.31 37.33666667 0.047275292 0.86384204 0.562449781 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 8240818 8240824 - 3R_8240818_8240824_- 0.788907088 0.796259451 0.79258327 0.005198932 CG9636 FBtr0081806|FBtr0081806|FBtr0081806 8240745|8240745|8240745 8242389|8242389|8242389 3R - 8240810 8240850 3'utr CG9636 FlyBase G48864.1 ATTTTATATATATTAATATTATTTTTTGTGATAATTTAAAA 19 8240826 0.616078792 6 17 260 0.913043478 0.84509804 0 0.210526316 0.347826087 19 0 2 21 3R:8240810-8240850 7 CG9636 FBtr0081806|FBtr0081806|FBtr0081806 8240745|8240745|8240745 8242389|8242389|8242389 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 8240804 8240850 3'utr CG9636 FlyBase G36884.1 ATTTTATATATATTAATATTATTTTTTGTGATAATTTAAAAAAGGCA 18 8240827 0.6500114 8 15 242 0.769230769 1 0 0.333333333 0.538461538 18 5 1 20 3R:8240804-8240850 7 18 3484 FBgn0037556 751.8933333 33.43666667 51.34666667 0.023939566 0.538331173 0.350558297 2 3 2.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 8241671 8241676 - 3R_8241671_8241676_- 0.99999573 0.999963829 0.99997978 2.26E-05 CG9636 FBtr0081806|FBtr0081806|FBtr0081806|FBtr0306301|FBtr0306301|FBtr0306301 8240745|8240745|8240745|8240907|8240907|8240907 8242389|8242389|8242389|8242389|8242389|8242389 3R - 8241497 8241752 3'utr CG9636 FlyBase G48870.1 TATGACGACTGGGGTCGCGCCTGCGCTGTGACTTTTCCTTAGTTCCTTACGCAAGCGAATTCAAATCGAACCGTATCTGTGAAAATCGTGAATCTCAAACTCTTGAATGTCCTCGAACAGTATTGTTAAACATACTTCAGTCCCTAGGATCAGACGCAGGTGCGACACCAAAACCGAATTTGGCGCTCAAATAGACTTATTTAGACGTTTTTAGGTACTCGAATTGATAAATTTTGTTGGCCGTGTGCGTGTTTTT 281 8241677 0.826200735 33 269 1838 0.961538462 2.511883361 0.25739645 0.163701068 0.304733728 281 13 0 325 3R:8241497-8241752 6 CG9636 FBtr0081806|FBtr0081806|FBtr0081806|FBtr0306301|FBtr0306301|FBtr0306301 8240745|8240745|8240745|8240907|8240907|8240907 8242389|8242389|8242389|8242389|8242389|8242389 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 8241535 8241777 3'utr CG9636 FlyBase G36887.1 TCTGTTTCCGTTGCCAGTCGTCAATTATGACGACTGGGGTCGCGCCTGCGCTGTGACTTTTCCTTAGTTCCTTACGCAAGCGAATTCAAATCGAACCGTATCTGTGAAAATCGTGAATCTCAAACTCTTGAATGTCCTCGAACAGTATTGTTAAACATACTTCAGTCCCTAGGATCAGACGCAGGTGCGACACCAAAACCGAATTTGGCGCTCAAATAGACTTATTTAGACGTTTTTAGGTAC 190 8241677 0.823370133 28 181 1149 0.944029851 1.925999266 0.291044776 0.315789474 0.514925373 190 13 2 253 3R:8241535-8241777 6 111 3485 FBgn0037556 751.8933333 33.43666667 51.34666667 0.147627323 3.319708902 2.161776162 1 1 1 0.15 dme-miR-307a-3p 6mer3-8 GGTTGT 3R 8262256 8262261 - 3R_8262256_8262261_- 0.999814218 0.994363316 0.997088767 0.003854368 RpA-70 FBtr0081867 8262118 8262361 3R - 8262237 8262286 3'utr RpA-70 FlyBase G48886.1 ACGTTATTTCCAAATATTGTGAATGGGTTGTTATTCAGCTACGCTTCCCT 157 8262270 0.734602452 7 152 1447 0.965714286 1.449735454 0.057142857 0.108280255 0.2 157 1 5 169 3R:8262237-8262286 6 RpA-70 FBtr0081867 8262118 8262361 GGTTGT 6mer3-8 dme-miR-307a-3p 3R - 8262232 8262292 3'utr RpA-70 FlyBase G36896.1 TTACATACGTTATTTCCAAATATTGTGAATGGGTTGTTATTCAGCTACGCTTCCCTTAATT 86 8262270 0.704613687 9 80 780 0.935483871 1.161368002 0.096774194 0.325581395 0.532258065 86 1 7 116 3R:8262232-8262292 6 119 3486 FBgn0010173 2297.653333 131.1433333 201.0833333 0.051791973 0.907404113 0.591794447 9 9 9 0.15 dme-miR-14-3p 6mer2-7 AGACTG 3R 8302765 8302770 - 3R_8302765_8302770_- 0.999998891 0.999998694 0.999998793 1.41E-07 nac FBtr0081863 8302684 8302798 3R - 8302745 8302788 3'utr nac FlyBase G48900.1 AAGCTGCCAAAGTAAAGTAGACTGTTTAGGACTCTAGGAGATGT 19 8302763 0.894385741 4 17 124 0.916666667 1.342422681 0.083333333 0.210526316 0.375 19 2 0 22 3R:8302745-8302788 6 nac FBtr0081863 8302684 8302798 AGACTG 6mer2-7 dme-miR-14-3p 3R - 8302741 8302788 3'utr nac FlyBase G36911.1 AAGCTGCCAAAGTAAAGTAGACTGTTTAGGACTCTAGGAGATGTAAGT 20 8302771 0.958973438 7 20 124 1 1.447158031 0.107142857 0.3 0.5 20 0 0 28 3R:8302741-8302788 6 19 3487 FBgn0265351 61.36333333 6.03 9.073333333 0.309631159 3.150912106 2.094048494 -7 1 -3 0.15 dme-miR-304-5p 7mer-A1 GAGATTA 3R 8304539 8304545 - 3R_8304539_8304545_- 0.82334955 0.823342389 0.823345969 5.02E-06 Sgt1 FBtr0081862 8304188 8304585 3R - 8304514 8304582 3'utr Sgt1 FlyBase G48904.1 AAATGGCCATACTCCTTTATTTATAGAGTCAGCGAGAGAGATTAACAGAGAATAATTACTATAACGTGT 100 8304540 0.791933202 13 86 505 0.876106195 1.217483944 0.185840708 0.12 0.221238938 100 9 5 99 3R:8304514-8304582 7 Sgt1 FBtr0081862 8304188 8304585 GAGATTA 7mer-A1 dme-miR-304-5p 3R - 8304515 8304562 3'utr Sgt1 FlyBase G36912.1 TTATAGAGTCAGCGAGAGAGATTAACAGAGAATAATTACTATAACGTG 66 8304541 0.557150092 6 54 298 0.816326531 1.057991947 0.081632653 0.393939394 0.591836735 66 12 6 80 3R:8304515-8304562 7 79 3488 FBgn0265101 762 87.04666667 133.2433333 0.103674541 0.907559164 0.592900208 -5 -4 -4.5 0.15 dme-miR-2535b-3p 6mer3-8 CCGTGA 3R 8340466 8340471 - 3R_8340466_8340471_- 0.999999972 0.999999896 0.999999934 7.07E-08 CG9603 FBtr0081855|FBtr0305680 8339942|8339942 8340519|8340519 3R - 8340429 8340625 stop_codon CG9603 FlyBase G48919.1 CGTCGTGGACAACGTGCTCTACCGCGTCACCGTCGCTCTCGCCCTCGTCGGCATCGGTGGCATGGGCAAGCTTTTCTACGAGCTGAGTGTTCCCAAGAAGGAGTGAAGTCGCAGTACCGAACCCTAAGCTAAGCCATTAAACCCCGCGCAAGATCCGTGATTCAGCGTAGTCGCCTTATATTTCAATGTTTTGATTG 119 8340464 0.966881188 17 102 551 0.856115108 1.297395711 0.323741007 0.159663866 0.28057554 119 15 5 119 3R:8340429-8340625 6 CG9603 FBtr0081855|FBtr0305680 8339942|8339942 8340519|8340519 CCGTGA 6mer3-8 dme-miR-2535b-3p 3R - 8340442 8340487 5'utr CG9603 FlyBase G36925.1 AAACCCCGCGCAAGATCCGTGATTCAGCGTAGTCGCCTTATATTTC 64 8340464 0.949002874 6 58 285 0.921052632 1.419129308 0.570175439 0.53125 0.736842105 64 6 3 105 3R:8340442-8340487 6 83 3489 FBgn0040529 1087.99 255.58 391.3733333 0.076287466 0.324751546 0.212073723 -7 -7 -7 0.15 dme-miR-283-5p 8mer-A1 TGATATTA 3R 8352141 8352148 + 3R_8352141_8352148_+ 0.591819241 0.592192166 0.592005704 0.000263751 Atg13 FBtr0081843 8351704 8352817 3R + 8352094 8352153 3'utr Atg13 FlyBase G41016.1 ATATTTATATATGCCATTGTGTTAAGTAGAGTTGATAGGCTGCTATTTGATATTACCCAC 176 8352129 0.675267041 16 167 1457 0.946341463 1.50965048 0.209756098 0.142045455 0.263414634 176 6 5 194 3R:8352094-8352153 8 Atg13 FBtr0081843 8351704 8352817 TGATATTA 8mer-A1 dme-miR-283-5p 3R + 8352085 8352158 3'utr Atg13 FlyBase G30956.1 CCCGCCCTCATATTTATATATGCCATTGTGTTAAGTAGAGTTGATAGGCTGCTATTTGATATTACCCACTATGT 115 8352137 0.888949192 14 110 954 0.956284153 2.243038049 0.224043716 0.382608696 0.612021858 115 8 0 175 3R:8352085-8352158 8 80.5 3490 FBgn0261108 690.5733333 27.67666667 42.22333333 0.116569807 2.908587258 1.906528776 12 4 8 0.15 dme-miR-184-3p 6mer3-8 TCCGTC 3R 8359853 8359858 + 3R_8359853_8359858_+ 0.999709841 0.9987968 0.999253321 0.000645588 stck FBtr0081846|FBtr0081845|FBtr0081844|FBtr0306260 8359725|8359725|8359725|8359725 8359960|8359964|8359964|8359964 3R + 8359804 8359886 3'utr stck FlyBase G41033.1 ATTTGAGAAACTAAAACCAAACAAACTAAAACCTCTTGTGCATGTCCTTTCCGTCTGTTGTAATCCGGTTGTGTGTAACTTAA 57 8359852 0.991784635 9 50 548 0.914634146 1.273001272 0.402439024 0.245614035 0.475609756 57 4 3 75 3R:8359804-8359886 6 stck FBtr0081846|FBtr0081845|FBtr0081844|FBtr0306260 8359725|8359725|8359725|8359725 8359960|8359964|8359964|8359964 TCCGTC 6mer3-8 dme-miR-184-3p 3R + 8359704 8359865 stop_codon stck FlyBase G30969.1 TGACAATGAAAAAGAACACCTAATGCCTTGGAGCGAGTCTCAGATCCACACCAAACAGTGCCTTTGTCGTTGTAGACCCGCTTTCACTACCATTTTTAACATTTGAGAAACTAAAACCAAACAAACTAAAACCTCTTGTGCATGTCCTTTCCGTCTGTTGTA 63 8359852 0.98422314 12 63 496 1 1.924279286 0.452380952 0.26984127 0.452380952 63 0 0 84 3R:8359704-8359865 6 43 3491 FBgn0020249 375.3333333 31.76 48.60666667 0.114564831 1.353904282 0.884652311 1 1 1 0.15 dme-miR-263a-5p 7mer-m1 TGCCATT 3R 8647637 8647643 - 3R_8647637_8647643_- 0.501807584 0.481202817 0.491505201 0.014569794 Mkk4 FBtr0334320|FBtr0081892 8646170|8647582 8648721|8648721 3R - 8647621 8647658 3'utr Mkk4 FlyBase G48951.1 CGCATATTTATACCATGCCATTCCTGCCCAAAAATATT 60 8647638 0.74574753 3 59 294 0.971830986 1.838849091 0 0.166666667 0.295774648 60 2 0 69 3R:8647621-8647658 7 Mkk4 FBtr0334320|FBtr0081892 8646170|8647582 8648721|8648721 TGCCATT 7mer-m1 dme-miR-263a-5p 3R - 8647613 8647665 3'utr Mkk4 FlyBase G36948.1 GACGTACCGCATATTTATACCATGCCATTCCTGCCCAAAAATATTCACAGCCA 34 8647638 0.924412357 2 34 167 1 1.69019608 0.06122449 0.323529412 0.530612245 34 0 0 49 3R:8647613-8647665 7 47 3492 FBgn0024326 1503.63 65.79666667 100.66 0.03125769 0.714321901 0.466918339 -5 -5 -5 0.15 dme-miR-1003-3p 6mer3-8 ATGTGA 3R 8647820 8647825 - 3R_8647820_8647825_- 0.999999572 0.999969533 0.999984552 2.13E-05 Mkk4 FBtr0334320|FBtr0081892|FBtr0300443 8646170|8647582|8647755 8648721|8648721|8648721 3R - 8647809 8647840 3'utr Mkk4 FlyBase G48953.1 ACAAAAACAAAAGTCATGTGAAAACTACAAAT 7 8647825 0.894502451 3 6 19 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3R:8647809-8647840 6 Mkk4 FBtr0334320|FBtr0081892|FBtr0300443 8646170|8647582|8647755 8648721|8648721|8648721 ATGTGA 6mer3-8 dme-miR-1003-3p 3R - 8647803 8647844 3'utr Mkk4 FlyBase G36950.1 AGCTACAAAAACAAAAGTCATGTGAAAACTACAAATAAAACA 7 8647815 0.928447892 4 7 23 1 1.041392685 0 0.571428571 0.727272727 7 0 0 11 3R:8647803-8647844 6 6.5 3493 FBgn0024326 1503.63 65.79666667 100.66 0.004322872 0.098789199 0.064573813 0 -10 -5 0.15 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 8655106 8655111 - 3R_8655106_8655111_- 0.999288119 0.999999984 0.999644052 0.000503389 bel FBtr0334319 8654973 8655784 3R - 8655098 8655138 3'utr bel FlyBase G48974.1 TGAAAGCGCAAATCCTTGAACTTCAATTGATGATTTTAAAC 10 8655111 0.961488311 4 10 84 1 1.113943352 0.076923077 0.3 0.461538462 10 0 0 13 3R:8655098-8655138 6 bel FBtr0334319 8654973 8655784 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R - 8655079 8655127 3'utr bel FlyBase G36964.1 ATCCTTGAACTTCAATTGATGATTTTAAACGAAGAAAACATAAAAATAG 6 8655112 0.983124136 5 6 47 1 0.954242509 0.111111111 0.333333333 0.555555556 6 0 0 9 3R:8655079-8655127 6 7 3494 FBgn0263231 3598.653333 111.0166667 171.27 0.001945172 0.063053596 0.040871139 0 1 0.5 0.15 dme-bantam-3p 7mer-m8 TGATCTC 3R 8714893 8714899 + 3R_8714893_8714899_+ 0.648494016 0.648468426 0.648481221 1.81E-05 CG8112 FBtr0343149 8713899 8715263 3R + 8714864 8715219 stop_codon CG8112 FlyBase G41107.2 CAAGGTGGCCGCCTCGCTGGCAGTGTTCATGATCTCCGCTGTGGTCCATGAGCAGGTTCTCGGCTTTGCCCTGCAAATGTTCTTCCCAGTGATGTTCTTCTTCTTTGGGGTCGTGGGTGTTGCCTTGGTATTCCTAATGCGGAGTGCTCCAAAAGTGATGGGCAACATCTTTCTGTGGTTCTCTCTGATCCTGGGAAATGCCACGCTGATCTCACTATACGCCATGGAGCATTACGCCCTAAAGAACTGCAACCTAAGCAACGAGAGTTGGACGTATCGCCTGCTGCCGGCGGTATGGCGCTGCTACAATTAGTCAATTAGTTAAACACTACTTTTAAACTGTCTGTACACAGGGC 207 8714893 0.847350264 51 199 1465 0.966101695 1.880813592 0.25 0.120772947 0.228813559 207 6 2 228 3R:8714864-8715219 7 CG8112 FBtr0343149 8713899 8715263 TGATCTC 7mer-m8 dme-bantam-3p 3R + 8714833 8714984 3'utr CG8112 FlyBase G31014.1 AGGATATGTACACTCATGTGTTCCGAGGTTCCAAGGTGGCCGCCTCGCTGGCAGTGTTCATGATCTCCGCTGTGGTCCATGAGCAGGTTCTCGGCTTTGCCCTGCAAATGTTCTTCCCAGTGATGTTCTTCTTCTTTGGGGTCGTGGGTGTT 65 8714893 0.987779797 16 57 517 0.876404494 1.892094603 0.359550562 0.323076923 0.505617978 65 11 0 78 3R:8714833-8714984 7 64 3495 FBgn0037612 294.1433333 19.15333333 28.95666667 0.217580998 3.341454925 2.210199148 0 0 0 0.15 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 8715319 8715326 - 3R_8715319_8715326_- 0.625358746 0.625363831 0.625361288 3.61E-06 Cks85A FBtr0081949|FBtr0305339|FBtr0337074 8715198|8715198|8712904 8715436|8715436|8715436 3R - 8715269 8715335 3'utr Cks85A FlyBase G49018.1 AAGAAACCATAGCTTTAGGGTTCAGCTGGGAAGTTCAAAGACACGAAACGAACTGAAGACATCGTTT 25 8715326 0.968230572 8 24 130 0.925925926 1.397940009 0.148148148 0.08 0.148148148 25 2 0 25 3R:8715269-8715335 8 Cks85A FBtr0305339|FBtr0337074|FBtr0081949 8715198|8712904|8715198 8715436|8715436|8715436 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R - 8715284 8715336 3'utr Cks85A FlyBase G36998.1 TAAGAAACCATAGCTTTAGGGTTCAGCTGGGAAGTTCAAAGACACGAAACGAA 15 8715326 0.961883877 4 14 71 0.925925926 1.397940009 0 0.466666667 0.703703704 15 2 0 25 3R:8715284-8715336 8 16.5 3496 FBgn0037613 139.0166667 24.61 37.97 0.118690804 0.670459163 0.434553595 0 0 0 0.15 dme-miR-33-5p 6mer3-8 CAATGC 3R 8715382 8715387 - 3R_8715382_8715387_- 0.879147439 0.760454415 0.819800927 0.083928625 Cks85A FBtr0081949|FBtr0305339|FBtr0337074 8715198|8715198|8712904 8715436|8715436|8715436 3R - 8715341 8715462 stop_codon Cks85A FlyBase G49019.1 AGGCCATCGCGAATCTCTGCGGTTAGGCGGAGGATGCCATGCCGCCGAGGAATGCTCTTCCAAGGACGCACTCGTCAATGCTCACGTAGTATTTCATAAGTTAGCATCAGGCAGCCTGATGT 26 8715384 0.965005246 14 24 127 0.942857143 1.217483944 0.285714286 0.230769231 0.428571429 26 1 1 33 3R:8715341-8715462 6 Cks85A FBtr0305339|FBtr0337074|FBtr0081949 8715198|8712904|8715198 8715436|8715436|8715436 CAATGC 6mer3-8 dme-miR-33-5p 3R - 8715341 8715428 3'utr Cks85A FlyBase G36999.1 TGCCATGCCGCCGAGGAATGCTCTTCCAAGGACGCACTCGTCAATGCTCACGTAGTATTTCATAAGTTAGCATCAGGCAGCCTGATGT 20 8715409 0.9735531 10 19 110 0.942857143 1.51851394 0.371428571 0.5 0.714285714 20 2 0 33 3R:8715341-8715428 6 8 3497 FBgn0037613 139.0166667 24.61 37.97 0.057547057 0.325071109 0.210692652 -3 22 9.5 0.15 dme-miR-7-5p 7mer-A1 TCTTCCA 3R 8715401 8715407 - 3R_8715401_8715407_- 0.452269726 0.812708621 0.632489173 0.25486879 Cks85A FBtr0081949|FBtr0305339|FBtr0337074 8715198|8715198|8712904 8715436|8715436|8715436 3R - 8715341 8715462 stop_codon Cks85A FlyBase G49019.1 AGGCCATCGCGAATCTCTGCGGTTAGGCGGAGGATGCCATGCCGCCGAGGAATGCTCTTCCAAGGACGCACTCGTCAATGCTCACGTAGTATTTCATAAGTTAGCATCAGGCAGCCTGATGT 26 8715384 0.965005246 14 24 127 0.942857143 1.217483944 0.285714286 0.230769231 0.428571429 26 1 1 33 3R:8715341-8715462 7 Cks85A FBtr0305339|FBtr0337074|FBtr0081949 8715198|8712904|8715198 8715436|8715436|8715436 TCTTCCA 7mer-A1 dme-miR-7-5p 3R - 8715341 8715428 3'utr Cks85A FlyBase G36999.1 TGCCATGCCGCCGAGGAATGCTCTTCCAAGGACGCACTCGTCAATGCTCACGTAGTATTTCATAAGTTAGCATCAGGCAGCCTGATGT 20 8715409 0.9735531 10 19 110 0.942857143 1.51851394 0.371428571 0.5 0.714285714 20 2 0 33 3R:8715341-8715428 7 4.5 3498 FBgn0037613 139.0166667 24.61 37.97 0.032370219 0.182852499 0.118514617 -23 2 -10.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 3R 8719929 8719935 + 3R_8719929_8719935_+ 0.821524309 0.814506659 0.818015484 0.004962193 CG8116 FBtr0300544|FBtr0081905|FBtr0300543 8718041|8718041|8718041 8720339|8720339|8721320 3R + 8719874 8719951 3'utr CG8116 FlyBase G41112.1 CCAGACCTACCGACTGCGCCTGGAGTACTGCCTGTGCACGCTGCAGATCGCCCTTTACCTGACCGAGGTGTGGTATGC 17 8719927 0.964984666 5 17 93 1 1.255272505 0.388888889 0.058823529 0.111111111 17 0 0 18 3R:8719874-8719951 7 CG8116 FBtr0081905|FBtr0300543|FBtr0300544 8718041|8718041|8718041 8720339|8721320|8720339 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R + 8719906 8719947 3'utr CG8116 FlyBase G31019.1 TGTGCACGCTGCAGATCGCCCTTTACCTGACCGAGGTGTGGT 24 8719927 0.747641304 2 23 142 0.973684211 1.568201724 0.631578947 0.375 0.605263158 24 1 0 37 3R:8719906-8719947 7 19.5 3499 FBgn0037614 544.57 26.27333333 40.6 0.035808069 0.742197412 0.480295567 2 2 2 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 8720123 8720129 + 3R_8720123_8720129_+ 0.658833612 0.658960029 0.65889682 8.94E-05 CG8116 FBtr0300544|FBtr0081905|FBtr0300543 8718041|8718041|8718041 8720339|8720339|8721320 3R + 8720103 8720168 5'utr CG8116 FlyBase G41114.1 AATGAATTTGAAAAGCAGTAGGCAGCTGAATTGCTCATGGCCGTGGAGAAGAGAAACCAAACAGAA 30 8720140 0.945167452 5 29 122 0.972972973 1.556302501 0.324324324 0.166666667 0.324324324 30 1 0 36 3R:8720103-8720168 7 CG8116 FBtr0081905|FBtr0300543|FBtr0300544 8718041|8718041|8718041 8720339|8721320|8720339 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 8720073 8720162 5'utr CG8116 FlyBase G31020.1 AAAAGGATAATATGCGGTGTAAGGAAATTTAATGAATTTGAAAAGCAGTAGGCAGCTGAATTGCTCATGGCCGTGGAGAAGAGAAACCAA 26 8720121 0.947154766 6 26 111 1 1.62324929 0.19047619 0.5 0.69047619 26 0 0 42 3R:8720073-8720162 7 17.5 3500 FBgn0037614 544.57 26.27333333 40.6 0.032135446 0.6660746 0.431034483 -17 2 -7.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 8720513 8720520 + 3R_8720513_8720520_+ 0.631121742 0.631136647 0.631129195 1.05E-05 CG8116 FBtr0300543 8718041 8721320 3R + 8720460 8720532 3'utr CG8116 FlyBase G41115.1 TAGCTCGAATCTTAAAAAGAATTGTAAAAAAATCAGTGGAATGTCTCACAAAATCTAGTCAGCATCAAAATCA 37 8720513 0.980800892 8 31 224 0.857142857 1.255272505 0 0.108108108 0.214285714 37 5 1 36 3R:8720460-8720532 8 CG8116 FBtr0300543 8718041 8721320 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 8720489 8720531 3'utr CG8116 FlyBase G31022.1 AAATCAGTGGAATGTCTCACAAAATCTAGTCAGCATCAAAATC 22 8720513 0.705455413 5 18 122 0.806451613 0.795880017 0 0.363636364 0.548387097 22 3 3 25 3R:8720489-8720531 8 27.5 3501 FBgn0037614 544.57 26.27333333 40.6 0.050498558 1.046688658 0.677339901 0 0 0 0.15 dme-miR-970-3p 7mer-m8 TCTTATG 3R 8735666 8735672 + 3R_8735666_8735672_+ 0.477943873 0.440718109 0.459330991 0.026322616 CG8202 FBtr0081914 8735615 8735837 3R + 8735628 8735687 3'utr CG8202 FlyBase G41138.1 GTAAATCCTATGGTTATTTATTTGCTGAGATTATATATTCTTATGTGCATGAATCTTTTA 24 8735664 0.991982066 6 23 274 0.965517241 1.447158031 0.275862069 0.166666667 0.310344828 24 1 0 28 3R:8735628-8735687 7 CG8202 FBtr0081914 8735615 8735837 TCTTATG 7mer-m8 dme-miR-970-3p 3R + 8735628 8735686 3'utr CG8202 FlyBase G31039.1 GTAAATCCTATGGTTATTTATTTGCTGAGATTATATATTCTTATGTGCATGAATCTTTT 31 8735663 0.993303019 7 30 361 0.98 1.389166084 0.32 0.387096774 0.62 31 0 1 49 3R:8735628-8735686 7 24 3502 FBgn0037622 349.97 13.58666667 20.66666667 0.068577307 1.766437684 1.161290323 2 3 2.5 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 8753966 8753971 + 3R_8753966_8753971_+ 0.498285715 0.997329313 0.747807514 0.352877114 CG8223 FBtr0081915|FBtr0308889 8753798|8753798 8754104|8754104 3R + 8753895 8754049 3'utr CG8223 FlyBase G41153.1 ACGCATTAAACACCATTCAACTGTCCTATACCTCGAACCTACATATTTATGCTACTTGTTTGCTGTTTTCTACCAAAATTCTCTGTAAGTCTGTAAGTTTACAATCACAATTAGTGCTAAGTGCGTACATAAAATAATGTTTTGTATTAAAAGAA 56 8753954 0.988430915 21 55 511 0.985294118 1.525044807 0.147058824 0.214285714 0.352941176 56 0 1 67 3R:8753895-8754049 6 CG8223 FBtr0081915|FBtr0308889 8753798|8753798 8754104|8754104 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 8753896 8754017 3'utr CG8223 FlyBase G31048.1 CGCATTAAACACCATTCAACTGTCCTATACCTCGAACCTACATATTTATGCTACTTGTTTGCTGTTTTCTACCAAAATTCTCTGTAAGTCTGTAAGTTTACAATCACAATTAGTGCTAAGTG 39 8753963 0.983764645 14 38 323 0.98245614 1.748188027 0.140350877 0.307692308 0.526315789 39 1 0 56 3R:8753896-8754017 6 25 3503 FBgn0037624 1739.743333 106.23 163.4833333 0.014369936 0.235338417 0.152920787 12 3 7.5 0.15 dme-miR-932-5p 8mer-A1 GGAATTGA 3R 8774371 8774378 - 3R_8774371_8774378_- 0.621933072 0.583734664 0.602833868 0.027010348 Pif1B FBtr0332503|FBtr0091716|FBtr0091717|FBtr0332504 8774284|8774284|8774284|8774284 8774612|8774612|8774612|8774612 3R - 8774356 8774515 3'utr Pif1B FlyBase G49033.1 TATAGCGTATTGATATGTAGTGTTTGTTAAGAGTTCTTTATCTGGAGGATACCAATTGAAATCGTCTGTACGTAGTGCTTTGCATAGTGCCTTAAATCGTAATAGTATATCGTAAGCAAATATCAATGCATTGTAATGGAATTGAAAGCAGGTGGCTTCA 162 8774379 0.984877627 22 155 1255 0.943877551 2.267171728 0.076530612 0.179012346 0.321428571 162 11 0 185 3R:8774356-8774515 8 Pif1B FBtr0332504|FBtr0091717|FBtr0091716|FBtr0332503 8774284|8774284|8774284|8774284 8774612|8774612|8774612|8774612 GGAATTGA 8mer-A1 dme-miR-932-5p 3R - 8774356 8774418 3'utr Pif1B FlyBase G37011.1 CGTAATAGTATATCGTAAGCAAATATCAATGCATTGTAATGGAATTGAAAGCAGGTGGCTTCA 100 8774379 0.76898868 7 90 740 0.927631579 1.547159121 0.059210526 0.35 0.572368421 100 8 3 141 3R:8774356-8774418 8 68.5 3504 FBgn0046874 160.93 2.47 3.813333333 0.425650904 27.73279352 17.96328671 1 1 1 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 3R 8806074 8806080 + 3R_8806074_8806080_+ 0.620174701 0.620190912 0.620182806 1.15E-05 Tcp-1eta FBtr0081918 8806018 8806234 3R + 8806037 8806111 3'utr Tcp-1eta FlyBase G41163.1 TCCAGAGAACACTACACCCTAATCATCAAAACTCACTTGCATTTCTCTCCTAATTTAACACGTACACGTATTACT 65 8806073 0.945176488 10 59 501 0.952941176 1.908485019 0.035294118 0.261538462 0.435294118 65 4 0 81 3R:8806037-8806111 7 Tcp-1eta FBtr0081918 8806018 8806234 TGCATTT 7mer-m8 dme-miR-277-3p 3R + 8806039 8806143 3'utr Tcp-1eta FlyBase G31058.1 CAGAGAACACTACACCCTAATCATCAAAACTCACTTGCATTTCTCTCCTAATTTAACACGTACACGTATTACTCGGTCATACCTTCGCATTTCGCACGCTTCGAA 34 8806073 0.986595955 13 32 271 0.954545455 1.62324929 0.068181818 0.235294118 0.409090909 34 2 0 42 3R:8806039-8806143 7 36 3505 FBgn0037632 3686.506667 229.3533333 352.0766667 0.009765342 0.156963056 0.102250457 1 1 1 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 8807216 8807223 + 3R_8807216_8807223_+ 0.599903943 0.511350023 0.555626983 0.062617063 hng2 FBtr0081919 8807182 8807581 3R + 8807187 8807258 3'utr hng2 FlyBase G41170.1 TTCACTACAGAAGTCAAATCATTTACAAATGCATTTACAAGAAGGGCAAAATTCGTTTAACAGCAAGTTAAC 16 8807216 0.96443678 5 15 79 1 1.278753601 0.315789474 0.1875 0.315789474 16 0 0 19 3R:8807187-8807258 8 hng2 FBtr0081919 8807182 8807581 TGCATTTA 8mer-A1 dme-miR-277-3p 3R + 8807195 8807249 3'utr hng2 FlyBase G31063.1 AGAAGTCAAATCATTTACAAATGCATTTACAAGAAGGGCAAAATTCGTTTAACAG 12 8807220 0.952218411 6 11 53 0.866666667 1.113943352 0.466666667 0.25 0.4 12 2 0 13 3R:8807195-8807249 8 8.5 3506 FBgn0037634 138.6666667 14.15666667 21.7 0.061298077 0.600423829 0.391705069 0 -4 -2 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 3R 8807462 8807467 + 3R_8807462_8807467_+ 0.999998023 0.878645852 0.939321937 0.085808893 hng2 FBtr0081919 8807182 8807581 3R + 8807433 8807497 3'utr hng2 FlyBase G41171.1 GCGTCAAATAGTTTTCTCATAGTAACTTCTGTGTTTTGCGCAATGTATATATTATACGCTTACTT 6 8807468 0.987686006 6 6 55 1 0.954242509 0.444444444 0.333333333 0.555555556 6 0 0 9 3R:8807433-8807497 6 hng2 FBtr0081919 8807182 8807581 TGTGTT 6mer3-8 dme-miR-317-3p 3R + 8807444 8807473 3'utr hng2 FlyBase G31064.1 TTTTCTCATAGTAACTTCTGTGTTTTGCGC 9 8807468 0.799595948 4 8 86 0.928571429 0.812913357 0.785714286 0.222222222 0.5 9 0 1 13 3R:8807444-8807473 6 6 3507 FBgn0037634 138.6666667 14.15666667 21.7 0.043269231 0.423828585 0.276497696 -6 -6 -6 0.15 dme-miR-276a-3p 7mer-A1 GTTCCTA 3R 8814045 8814051 - 3R_8814045_8814051_- 0.814877333 0.822400743 0.818639038 0.005319847 CG9821 FBtr0334659 8813488 8817862 3R - 8814032 8814095 3'utr CG9821 FlyBase G49074.1 GAACCATTTCCAACTCCGTTTCGATGTGAAAAACTATCCTGATTGTTCCTATGTTAGTTCTGAG 9 8814053 0.992959407 3 7 89 0.916666667 1.041392685 0.416666667 0.333333333 0.5 9 1 0 11 3R:8814032-8814095 7 CG9821 FBtr0334659 8813488 8817862 GTTCCTA 7mer-A1 dme-miR-276a-3p 3R - 8813991 8814068 3'utr CG9821 FlyBase G37039.1 GAAAAACTATCCTGATTGTTCCTATGTTAGTTCTGAGTAGATGCAACCGCAATCGGATCGGCGAATCCATTAACAACT 10 8814053 0.993970706 4 8 95 0.785714286 1.041392685 0.214285714 0.4 0.571428571 10 3 0 11 3R:8813991-8814068 7 7.5 3508 FBgn0037636 4388.82 121.91 186.95 0.001708888 0.061520794 0.040117679 2 2 2 0.15 dme-miR-33-5p 6mer2-7 AATGCA 3R 8814154 8814159 - 3R_8814154_8814159_- 0.999754836 0.998042852 0.998898844 0.001210496 CG9821 FBtr0334659 8813488 8817862 3R - 8814107 8814176 3'utr CG9821 FlyBase G49075.1 CCAGATATTGCGACATAAATGCATGCAAAGTAAAATAAAACGATAAGCAACTTTACAGAGCCGAAGGGCA 25 8814156 0.962702372 8 25 125 1 1.462397998 0 0.16 0.275862069 25 0 0 29 3R:8814107-8814176 6 CG9821 FBtr0334659 8813488 8817862 AATGCA 6mer2-7 dme-miR-33-5p 3R - 8814145 8814182 3'utr CG9821 FlyBase G37040.1 AAACACCCAGATATTGCGACATAAATGCATGCAAAGTA 14 8814156 0.850563049 5 11 72 0.84 1.322219295 0.08 0.5 0.72 14 4 0 21 3R:8814145-8814182 6 18.5 3509 FBgn0037636 4388.82 121.91 186.95 0.004215256 0.151751292 0.09895694 -3 -3 -3 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 8814959 8814964 - 3R_8814959_8814964_- 0.763677484 0.998047591 0.880862538 0.165724687 CG9821 FBtr0081931|FBtr0334660|FBtr0334659 8814683|8814683|8813488 8817862|8817862|8817862 3R - 8814854 8815027 3'utr CG9821 FlyBase G49079.1 CGTCGTTCTAAAAACAATGAAAAGAAAGCAACCAAGCACTATGTATTTTTTTAATTTCTCCATTGATCTAATTTACAATTTAATTTGCAATTTTTTGTGATACTTTGCTATATTTTTAAACCTGGTATGTATACAAATTAAAAACAAATACAACTGAAGAGAAAACGATTAATT 320 8814965 0.990761197 33 313 3243 0.984848485 2.113943352 0.075757576 0.1875 0.343434343 320 4 2 390 3R:8814854-8815027 6 CG9821 FBtr0334659|FBtr0081931|FBtr0334660 8813488|8814683|8814683 8817862|8817862|8817862 TGATCT 6mer3-8 dme-bantam-3p 3R - 8814854 8814986 3'utr CG9821 FlyBase G37044.2 TGTATTTTTTTAATTTCTCCATTGATCTAATTTACAATTTAATTTGCAATTTTTTGTGATACTTTGCTATATTTTTAAACCTGGTATGTATACAAATTAAAAACAAATACAACTGAAGAGAAAACGATTAATT 238 8814965 0.991323228 28 232 2525 0.976331361 2.041392685 0.050295858 0.327731092 0.526627219 238 6 2 330 3R:8814854-8814986 6 126.5 3510 FBgn0037636 4388.82 121.91 186.95 0.028823237 1.037650726 0.676651511 1 1 1 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 3R 8815492 8815498 - 3R_8815492_8815498_- 0.620182252 0.620177616 0.620179934 3.32E-06 CG9821 FBtr0081931|FBtr0334660|FBtr0334659 8814683|8814683|8813488 8817862|8817862|8817862 3R - 8815244 8815536 3'utr CG9821 FlyBase G49081.1 ACCCCACAGAAAGACCCAAAACTTGTCGCGCAGAATTTTGCATTTTTTTTAAGTGTAAGCAAAACGTTTGTTACTTACTGGACGTCAGTTTAAGCGGAGAACAGCTTAGATTTCATTGAAGCAGGATAGAGATACAGATGCAAAACCTATTTGTAAAATTCAAAAGAAGAGAAAACCACTTTACTTAAAACAGACCAAAACAGCCCAGATTCGCCCGCTCTGCCTTGGACTGTGGGCACAAACGTTCCGGCCCGCTGACTTTTTCAACACCAATCAGTACAAAATAATTTCCA 284 8815499 0.984709519 42 268 2152 0.93982808 1.913813852 0.283667622 0.169014085 0.323782235 284 18 3 328 3R:8815244-8815536 7 CG9821 FBtr0334659|FBtr0081931|FBtr0334660 8813488|8814683|8814683 8817862|8817862|8817862 TGCATTT 7mer-m8 dme-miR-277-3p 3R - 8815375 8815525 3'utr CG9821 FlyBase G37046.1 AGACCCAAAACTTGTCGCGCAGAATTTTGCATTTTTTTTAAGTGTAAGCAAAACGTTTGTTACTTACTGGACGTCAGTTTAAGCGGAGAACAGCTTAGATTTCATTGAAGCAGGATAGAGATACAGATGCAAAACCTATTTGTAAAATTCA 115 8815499 0.983829572 26 107 1106 0.915662651 2.181843588 0.391566265 0.339130435 0.542168675 115 14 0 152 3R:8815375-8815525 7 98.5 3511 FBgn0037636 4388.82 121.91 186.95 0.02244339 0.807973095 0.526878845 1 1 1 0.15 dme-miR-12-5p 6mer3-8 AATACT 3R 8816157 8816162 - 3R_8816157_8816162_- 0.985132372 0.986938757 0.986035564 0.001277318 CG9821 FBtr0081931|FBtr0334660|FBtr0334659 8814683|8814683|8813488 8817862|8817862|8817862 3R - 8816098 8816326 3'utr CG9821 FlyBase G49083.1 TATGTTTGATCTTGCGCCGAGCGGAAACAACAATTGTGAAAACAACTAAAAACTATATAAGTTGCAATCCCCAAAGCGAAGGCTTTACGAGAGAGGAAAAGATATAGTAATCGCGAGATGAGAATGAAATGAAACTACTTTATGTAAACTATTCGTTGATGCTCAATACTGAAACACTTGAACCCAGTACCTTATTTTCATTATTAGCATTACTTATTAATTGTTAATA 970 8816170 0.933809347 49 921 6839 0.948497854 2.140272291 0.098712446 0.16185567 0.302145923 970 53 7 1105 3R:8816098-8816326 6 CG9821 FBtr0334659|FBtr0081931|FBtr0334660 8813488|8814683|8814683 8817862|8817862|8817862 AATACT 6mer3-8 dme-miR-12-5p 3R - 8815675 8816324 3'utr CG9821 FlyBase G37047.2 TGTTTGATCTTGCGCCGAGCGGAAACAACAATTGTGAAAACAACTAAAAACTATATAAGTTGCAATCCCCAAAGCGAAGGCTTTACGAGAGAGGAAAAGATATAGTAATCGCGAGATGAGAATGAAATGAAACTACTTTATGTAAACTATTCGTTGATGCTCAATACTGAAACACTTGAACCCAGTACCTTATTTTCATTATTAGCATTACTTATTAATTGTTAATATTAATATGTATGTAAATTATTTAAGCCATCCCAAGCCTCCCACACTTCCAGATATCCTCAGCCAATCCAAAGTTATTTGTATTTTGCGTAGAAAGAGGCAGCGTGAGTTTTGTTATGTGTTTTTGCCAAGTGAATTGGCACCGAAGTGATAAGCCAAAAACAAAAGGAACCCCAAAATGTAAATGATAGTGGAAAATCCCAGAAATAAGATCGCACTTGAGTTTTGTTTACGCATATTGTTTAACTTCCCGAACCATCTAAATTATGAAACACGAGAATGAGAGATGAAAAGATATGAAACTATAACAAAACACTCGATGATAGTTTTAAAAATGTTGAAAAGCCAAAAAAGTCAAGTACTGTTTAGGTTTACTGAGCAAGTTGTCATATATTGGTAGCTTTAAAGCTTGTATCTTCAAGTTA 1043 8816170 0.932668009 110 962 7064 0.926234766 1.904294688 0.12508018 0.37008629 0.57857601 1043 98 17 1444 3R:8815675-8816324 6 512 3512 FBgn0037636 4388.82 121.91 186.95 0.116660059 4.199819539 2.738700187 8 8 8 0.15 dme-bantam-3p 8mer-A1 TGATCTCA 3R 8817547 8817554 - 3R_8817547_8817554_- 0.627275263 0.627088407 0.627181835 0.000132158 CG9821 FBtr0081931|FBtr0334660|FBtr0334659 8814683|8814683|8813488 8817862|8817862|8817862 3R - 8817404 8817579 3'utr CG9821 FlyBase G49088.1 AAAAAAAAAACAAGAGTAATGTTTGTGATCTCAAGTGTGTATCATAAAACAATTAAACCAATTTGAGAAGCTATTAGGTGAGAAGAGAAAAACTGTTTCAAGAAAAGAAAACTGAAAGCAAACAAAATACAAGTAAAAAACACACAAACTACTGTCCTCACACAACCGACCGACAA 1553 8817555 0.986457162 31 1472 12650 0.950578339 2.143255074 0.087276551 0.186735351 0.335962145 1553 82 12 1808 3R:8817404-8817579 8 CG9821 FBtr0334659|FBtr0081931|FBtr0334660 8813488|8814683|8814683 8817862|8817862|8817862 TGATCTCA 8mer-A1 dme-bantam-3p 3R - 8817411 8817633 3'utr CG9821 FlyBase G37051.1 AAAAAAAGCGAAAACATTTCAACTGGAAATTTGAACTTTTTTAAACAAAAACAAAAAAAAAAAACAAGAGTAATGTTTGTGATCTCAAGTGTGTATCATAAAACAATTAAACCAATTTGAGAAGCTATTAGGTGAGAAGAGAAAAACTGTTTCAAGAAAAGAAAACTGAAAGCAAACAAAATACAAGTAAAAAACACACAAACTACTGTCCTCACACAACCGA 1326 8817555 0.977850059 33 1250 10639 0.949243533 1.92719177 0.105417277 0.386877828 0.603221083 1326 82 22 1945 3R:8817411-8817633 8 1295 3513 FBgn0037636 4388.82 121.91 186.95 0.295067923 10.62259044 6.926985825 1 1 1 0.15 dme-bantam-3p 6mer3-8 TGATCT 3R 8822988 8822993 - 3R_8822988_8822993_- 0.99655237 0.999980883 0.998266627 0.002424316 CG9836 FBtr0081930 8822847 8823423 3R - 8822950 8823063 3'utr CG9836 FlyBase G49097.1 CGCGTGACTGCTGATAAGTGCATAGAAGTTTAGGAATCGTCTGTCATTGATACTAAAGGATAGCTGGAACTGATCTTGTATGAATGCATATGCACGTGTGTGTTTTGTAGGGGA 62 8822991 0.979749146 16 58 406 0.930555556 1.826074803 0.097222222 0.129032258 0.25 62 5 0 67 3R:8822950-8823063 6 CG9836 FBtr0081930 8822847 8823423 TGATCT 6mer3-8 dme-bantam-3p 3R - 8822968 8823048 3'utr CG9836 FlyBase G37067.1 AAGTGCATAGAAGTTTAGGAATCGTCTGTCATTGATACTAAAGGATAGCTGGAACTGATCTTGTATGAATGCATATGCACG 46 8822992 0.97224604 14 45 277 0.985915493 1.84509804 0.126760563 0.391304348 0.605633803 46 1 0 70 3R:8822968-8823048 6 38.5 3514 FBgn0037637 411.3666667 53.83333333 81.98666667 0.093590471 0.715170279 0.469588551 -2 -1 -1.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 8823403 8823408 - 3R_8823403_8823408_- 0.999999892 0.999999984 0.999999938 7.07E-08 CG9836 FBtr0081930|FBtr0081930|FBtr0081930 8822847|8822847|8822847 8823423|8823423|8823423 3R - 8823365 8823437 stop_codon CG9836 FlyBase G49099.1 AGGTGGCCAACTGAGAGGCGGAACGGAATCTGTGAATGTAGTGGAGCGTTTCTCTGAACAACTACTAAAAAAA 315 8823409 0.955159775 9 307 1417 0.978378378 2.257678575 0.467567568 0.142857143 0.27027027 315 7 1 362 3R:8823365-8823437 6 CG9836 FBtr0081930|FBtr0081930|FBtr0081930 8822847|8822847|8822847 8823423|8823423|8823423 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 8823372 8823446 stop_codon CG9836 FlyBase G37069.1 AGCAGAAGAAGGTGGCCAACTGAGAGGCGGAACGGAATCTGTGAATGTAGTGGAGCGTTTCTCTGAACAACTACT 212 8823409 0.902667077 8 208 953 0.987878788 2.5132176 0.442424242 0.391509434 0.609090909 212 4 0 326 3R:8823372-8823446 6 253.5 3515 FBgn0037637 411.3666667 53.83333333 81.98666667 0.616238554 4.708978328 3.091966173 1 1 1 0.15 dme-miR-33-5p 7mer-A1 AATGCAA 3R 8827831 8827837 - 3R_8827831_8827837_- 0.777156983 0.7780112 0.777584092 0.000604011 pyd FBtr0305301|FBtr0310205|FBtr0305297|FBtr0305304|FBtr0305298|FBtr0305299|FBtr0305296|FBtr0305295 8827496|8827066|8827496|8827496|8827496|8827496|8827496|8827066 8828314|8828094|8828094|8828314|8828314|8828314|8828314|8828314 3R - 8827783 8827858 3'utr pyd FlyBase G49103.1 GAGCTAGAAATTAATCAATCGAATGCAATGGATACTTGTATAAAGCGACTAGAATTTAATTTCATACACAAATTAT 26 8827835 0.973883204 7 26 163 1 1.531478917 0.117647059 0.230769231 0.411764706 26 0 0 34 3R:8827783-8827858 7 pyd FBtr0305296|FBtr0305295|FBtr0305298|FBtr0305299|FBtr0305297|FBtr0305304|FBtr0305301|FBtr0310205 8827496|8827066|8827496|8827496|8827496|8827496|8827496|8827066 8828314|8828314|8828314|8828314|8828094|8828314|8828314|8828094 AATGCAA 7mer-A1 dme-miR-33-5p 3R - 8827788 8827925 3'utr pyd FlyBase G37074.1 AATTCGATATTGTCTGTTAATTGTGCCTTTAAGTGATCGTTTGGCTCTGCCTCTGAACTATTATATCGAGCTAGAAATTAATCAATCGAATGCAATGGATACTTGTATAAAGCGACTAGAATTTAATTTCATACACAA 48 8827835 0.982303009 23 45 371 0.961038961 1.392110465 0.12987013 0.375 0.61038961 48 1 2 74 3R:8827788-8827925 7 22.5 3516 FBgn0262614 694.76 11.98333333 18.49333333 0.032385284 1.877607789 1.21665465 -2 -2 -2 0.15 dme-miR-1007-3p 6mer3-8 TGAGCT 3R 8827972 8827977 - 3R_8827972_8827977_- 0.998043854 0.995656356 0.996850105 0.001688217 pyd FBtr0305301|FBtr0310205|FBtr0305297|FBtr0305304|FBtr0305298|FBtr0305299|FBtr0305296|FBtr0305295 8827496|8827066|8827496|8827496|8827496|8827496|8827496|8827066 8828314|8828094|8828094|8828314|8828314|8828314|8828314|8828314 3R - 8827904 8828033 3'utr pyd FlyBase G49104.2 TAGATCCGTAGTATCATATGTGTAGTCTTAGGGCCGCAATTCCAGGGCAGACGAAATGAGCTGAGCAAAGAGGTAGTATAGGCATTGCTTATATAATATAATAAATTTAATTCGATATTGTCTGTTAATT 55 8827977 0.987064342 13 51 311 0.984848485 1.812913357 0.136363636 0.127272727 0.272727273 55 1 0 65 3R:8827904-8828033 6 pyd FBtr0305296|FBtr0305295|FBtr0305298|FBtr0305299|FBtr0305297|FBtr0305304|FBtr0305301|FBtr0310205 8827496|8827066|8827496|8827496|8827496|8827496|8827496|8827066 8828314|8828314|8828314|8828314|8828094|8828314|8828314|8828094 TGAGCT 6mer3-8 dme-miR-1007-3p 3R - 8827942 8828182 stop_codon pyd FlyBase G37075.1 GAAGAATCTGCACACCGAGTGGGACAACATCGACCTGCCCAGCAATGCCGCCGCTCACACGGTCTCCGTCAAGGTGGATCACTTCTAATCATTAAGATTCATAGCACTACCATTCACCAGCCAACTTGAACGATATACGAAATTGTAAATAGATCCGTAGTATCATATGTGTAGTCTTAGGGCCGCAATTCCAGGGCAGACGAAATGAGCTGAGCAAAGAGGTAGTATAGGCATTGCTTAT 44 8827977 0.963941579 22 40 204 0.917808219 1.525044807 0.164383562 0.386363636 0.630136986 44 5 1 67 3R:8827942-8828182 6 11 3517 FBgn0262614 694.76 11.98333333 18.49333333 0.015832806 0.917941586 0.59480894 0 0 0 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3R 8942452 8942458 + 3R_8942452_8942458_+ 0.520301214 0.521222346 0.52076178 0.000651316 skap FBtr0334328|FBtr0334327 8942073|8942073 8942557|8942557 3R + 8942412 8942471 3'utr skap FlyBase G41209.1 ACGTGAATAATAGAAAATGGAAATGAAAATACGTTTTAATTGTGATTTTTGCAAAAGTTC 29 8942458 0.991705167 6 27 299 0.948717949 1.267171728 0.358974359 0.206896552 0.41025641 29 1 1 37 3R:8942412-8942471 7 skap FBtr0334328|FBtr0334327 8942073|8942073 8942557|8942557 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 8942403 8942539 3'utr skap FlyBase G31087.1 ATTAATTGCACGTGAATAATAGAAAATGGAAATGAAAATACGTTTTAATTGTGATTTTTGCAAAAGTTCATTTAAATTTTATTTATTGAAATGTGACCCTGCTTTTAAAGCAGATCCATCATCTTGTGTATTATCCT 41 8942451 0.991400554 16 39 410 0.943396226 1.698970004 0.264150943 0.219512195 0.396226415 41 3 0 50 3R:8942403-8942539 7 26.5 3518 FBgn0037643 1428.996667 91.75333333 140.5033333 0.01854448 0.288817845 0.188607625 -6 1 -2.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 8982673 8982680 + 3R_8982673_8982680_+ 0.639566918 0.631895235 0.635731076 0.005424711 CAHbeta FBtr0340014|FBtr0340014|FBtr0340014 8981922|8981922|8981922 8982793|8982793|8982793 3R + 8982587 8982709 3'utr CAHbeta FlyBase G41212.1 GATGAAGACACCGTGGATCGATTGTCCGAGGAGGTCAGAAGATTCTATTCGTAGGCGAAACATGCCAAGAGGACCAAATGGATTATCTGTGATATGTGGGCCTTATACCGCGATCGGCATTTA 144 8982672 0.964113334 14 134 1299 0.93452381 1.894869657 0.107142857 0.118055556 0.244047619 144 10 1 157 3R:8982587-8982709 8 CAHbeta FBtr0340014|FBtr0340014|FBtr0340014 8981922|8981922|8981922 8982793|8982793|8982793 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 8982639 8982699 3'utr CAHbeta FlyBase G31089.1 AGGCGAAACATGCCAAGAGGACCAAATGGATTATCTGTGATATGTGGGCCTTATACCGCGA 97 8982672 0.869174298 11 92 907 0.955128205 1.571126277 0.102564103 0.381443299 0.615384615 97 4 3 149 3R:8982639-8982699 8 113 3519 FBgn0037646 43.33333333 4.79 7.23 2.607692308 23.5908142 15.62932227 1 1 1 0.15 dme-miR-283-5p 7mer-m1 GATATTT 3R 8994788 8994794 + 3R_8994788_8994794_+ 0.758352391 0.63058525 0.69446882 0.090345054 CG11975 FBtr0081960|FBtr0336753 8994632|8994632 8994839|8995212 3R + 8994759 8994801 3'utr CG11975 FlyBase G41231.1 ATGTAGTTATACCTTGAGACATGATTGTGGATATTTTATATTT 34 8994783 0.736873264 5 33 260 0.943396226 1.096910013 0.113207547 0.411764706 0.622641509 34 0 3 50 3R:8994759-8994801 7 CG11975 FBtr0336753|FBtr0081960 8994632|8994632 8995212|8994839 GATATTT 7mer-m1 dme-miR-283-5p 3R + 8994743 8994804 3'utr CG11975 FlyBase G31103.1 AGTCGAGTTCACATAAATGTAGTTATACCTTGAGACATGATTGTGGATATTTTATATTTTAT 27 8994783 0.984699561 5 27 218 1 1.556302501 0.055555556 0.259259259 0.444444444 27 0 0 36 3R:8994743-8994804 7 22.5 3520 FBgn0037648 137.6666667 11.18666667 17.04333333 0.163438257 2.011323004 1.320164287 5 5 5 0.15 dme-miR-283-5p 7mer-m8 TGATATT 3R 9007898 9007904 + 3R_9007898_9007904_+ 0.611022478 0.610827711 0.610925094 0.000137744 CG11982 FBtr0081965 9007855 9008030 3R + 9007874 9007933 3'utr CG11982 FlyBase G41249.1 AATCGAAGTGGAGCGATGATCGATTGATATTCAAAATTAAGCCAAATATTGGCCGCATAT 24 9007897 0.981757562 5 23 166 0.965517241 1.447158031 0.034482759 0.166666667 0.310344828 24 1 0 28 3R:9007874-9007933 7 CG11982 FBtr0081965 9007855 9008030 TGATATT 7mer-m8 dme-miR-283-5p 3R + 9007872 9007912 3'utr CG11982 FlyBase G31115.1 TAAATCGAAGTGGAGCGATGATCGATTGATATTCAAAATTA 13 9007897 0.776921424 3 13 102 1 1.361727836 0 0.461538462 0.695652174 13 0 0 23 3R:9007872-9007912 7 16.5 3521 FBgn0037653 203.22 15.85333333 24.31666667 0.081192796 1.04079058 0.67854695 1 1 1 0.15 dme-miR-305-3p 6mer3-8 ATGTGC 3R 9010334 9010339 - 3R_9010334_9010339_- 0.920605654 0.890589244 0.905597449 0.021224871 CG11984 FBtr0300743|FBtr0300747|FBtr0300748|FBtr0300745|FBtr0300746|FBtr0300744 9010280|9010280|9010280|9010280|9010280|9010280 9010672|9010672|9010672|9010672|9010672|9010672 3R - 9010289 9010352 3'utr CG11984 FlyBase G49192.1 AAAGATGAGGAAGATGTGCAGCAAGAAAAATTATTGTAATCATTGAATTAATTATAATTTAAAG 15 9010338 0.839128936 5 13 60 0.875 0.84509804 0.4375 0.066666667 0.125 15 1 1 14 3R:9010289-9010352 6 CG11984 FBtr0300745|FBtr0300748|FBtr0300747|FBtr0300743|FBtr0300744|FBtr0300746 9010280|9010280|9010280|9010280|9010280|9010280 9010672|9010672|9010672|9010672|9010672|9010672 ATGTGC 6mer3-8 dme-miR-305-3p 3R - 9010286 9010358 3'utr CG11984 FlyBase G37138.1 TTATAAAAAGATGAGGAAGATGTGCAGCAAGAAAAATTATTGTAATCATTGAATTAATTATAATTTAAAGAAA 18 9010338 0.925047782 4 18 69 1 1.431363764 0.407407407 0.388888889 0.592592593 18 0 0 27 3R:9010286-9010358 6 13 3522 FBgn0037655 1188.326667 58.71666667 90.07 0.010939753 0.221402214 0.144332186 -1 -1 -1 0.15 dme-miR-965-3p 6mer2-7 ACGCTT 3R 9017195 9017200 - 3R_9017195_9017200_- 0.881542535 0.99127091 0.936406723 0.077589696 tgo FBtr0082005 9016771 9017753 3R - 9017184 9017226 3'utr tgo FlyBase G49212.1 AGCAACTCAGCAAGTGTACCACTTCCACGCTTTTCCCGCGAAC 10 9017194 0.707454545 2 10 59 1 1.079181246 0 0.2 0.333333333 10 0 0 12 3R:9017184-9017226 6 tgo FBtr0082005 9016771 9017753 ACGCTT 6mer2-7 dme-miR-965-3p 3R - 9017186 9017239 3'utr tgo FlyBase G37153.1 ATTGATAGTTGTAAGCAACTCAGCAAGTGTACCACTTCCACGCTTTTCCCGCGA 5 9017220 0.948781538 4 5 26 1 1 0.3 0.6 0.8 5 0 0 10 3R:9017186-9017239 6 6 3523 FBgn0264075 208 8.796666667 13.4 0.028846154 0.682076544 0.447761194 -6 20 7 0.15 dme-miR-7-5p 6mer2-7 TCTTCC 3R 9017720 9017725 - 3R_9017720_9017725_- 0.900298992 0.964374176 0.932336584 0.045308008 tgo FBtr0082005|FBtr0336755 9016771|9017245 9017753|9017753 3R - 9017665 9017743 3'utr tgo FlyBase G49217.1 ATTTCTTTCGATTCCCACTCTTCCCCCGTCCCGCAACTTAATCTGTGTCTCTCTTAACCACTTCTCAAGTGCAATCCAT 12 9017723 0.981112032 7 12 89 1 1.146128036 0.142857143 0.166666667 0.285714286 12 0 0 14 3R:9017665-9017743 6 tgo FBtr0082005|FBtr0336755 9016771|9017245 9017753|9017753 TCTTCC 6mer2-7 dme-miR-7-5p 3R - 9017688 9017741 3'utr tgo FlyBase G37157.1 TTCTTTCGATTCCCACTCTTCCCCCGTCCCGCAACTTAATCTGTGTCTCTCTTA 8 9017732 0.983815836 4 7 64 0.9 0.954242509 0.2 0.25 0.4 8 1 0 9 3R:9017688-9017741 6 7.5 3524 FBgn0264075 208 8.796666667 13.4 0.036057692 0.85259568 0.559701493 -2 7 2.5 0.15 dme-miR-33-5p 6mer3-8 CAATGC 3R 9020385 9020390 - 3R_9020385_9020390_- 0.808006269 0.855286225 0.831646247 0.033431938 neur FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002 9020346|9020346|9020346|9020346 9021792|9021792|9021792|9021792 3R - 9020367 9020408 3'utr neur FlyBase G49224.1 GATATATGTAAGAAAACGCAATGCTGTAATACCATTAAATAC 26 9020387 0.964396529 2 24 108 0.935483871 1.462397998 0.129032258 0.153846154 0.290322581 26 2 0 29 3R:9020367-9020408 6 neur FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002 9020346|9020346|9020346|9020346 9021792|9021792|9021792|9021792 CAATGC 6mer3-8 dme-miR-33-5p 3R - 9020365 9020399 3'utr neur FlyBase G37161.1 AAGAAAACGCAATGCTGTAATACCATTAAATACTG 23 9020387 0.971257676 2 22 97 0.918918919 1.531478917 0.135135135 0.434782609 0.648648649 23 3 0 34 3R:9020365-9020399 6 24.5 3525 FBgn0002932 466.07 14.63 22.51666667 0.052567211 1.674641148 1.088082902 -3 -3 -3 0.15 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 9020972 9020979 - 3R_9020972_9020979_- 0.630952866 0.631009775 0.630981321 4.02E-05 neur FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002|FBtr0300414 9020346|9020346|9020346|9020346|9020721 9021792|9021792|9021792|9021792|9021792 3R - 9020954 9021023 3'utr neur FlyBase G49227.1 GTTTAAAGTTAATATTAGTCTAGCCCTAAGTACTTAAGTTAATTTCTAGTCAACGAATTATGCTGAAGTT 100 9020980 0.98176363 8 93 688 0.936507937 1.594760753 0.03968254 0.18 0.349206349 100 6 2 118 3R:9020954-9021023 8 neur FBtr0300414|FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002 9020721|9020346|9020346|9020346|9020346 9021792|9021792|9021792|9021792|9021792 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R - 9020953 9020989 3'utr neur FlyBase G37163.1 TAAGTTAATTTCTAGTCAACGAATTATGCTGAAGTTA 95 9020980 0.80044952 4 93 619 0.973509934 2.167317335 0.039735099 0.410526316 0.629139073 95 4 0 147 3R:9020953-9020989 8 95.5 3526 FBgn0002932 466.07 14.63 22.51666667 0.204904843 6.527682843 4.241302739 1 1 1 0.15 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 3R 9021265 9021272 - 3R_9021265_9021272_- 0.625354797 0.625351445 0.625353121 2.40E-06 neur FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002|FBtr0300414 9020346|9020346|9020346|9020346|9020721 9021792|9021792|9021792|9021792|9021792 3R - 9021251 9021291 3'utr neur FlyBase G49229.1 ATTTGGCGATTAATCATTTTGGTGCTAAATGTTTTGAAAGG 37 9021273 0.723439899 5 37 361 1 1.681241237 0.270833333 0.243243243 0.416666667 37 0 0 48 3R:9021251-9021291 8 neur FBtr0300414|FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002 9020721|9020346|9020346|9020346|9020346 9021792|9021792|9021792|9021792|9021792 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 3R - 9021250 9021290 3'utr neur FlyBase G37164.1 TTTGGCGATTAATCATTTTGGTGCTAAATGTTTTGAAAGGC 31 9021273 0.725945473 2 31 290 1 1.662757832 0.347826087 0.322580645 0.543478261 31 0 0 46 3R:9021250-9021290 8 34 3527 FBgn0002932 466.07 14.63 22.51666667 0.072950415 2.323991798 1.509992598 1 1 1 0.15 dme-miR-11-3p 7mer-m1 TGTGATG 3R 9021555 9021561 - 3R_9021555_9021561_- 0.612062103 0.612069541 0.612065822 5.23E-06 neur FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002|FBtr0300414 9020346|9020346|9020346|9020346|9020721 9021792|9021792|9021792|9021792|9021792 3R - 9021504 9021579 3'utr neur FlyBase G49230.1 ACGTATGTTTAATTTTTTTGTGATGTTATAAGTAAGTGCGCCCCAGAGCCAAAACTATGTATTGTTCAATCCAACA 26 9021562 0.804586544 7 22 304 0.866666667 1.113943352 0.233333333 0.115384615 0.233333333 26 3 1 26 3R:9021504-9021579 7 neur FBtr0300414|FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002 9020721|9020346|9020346|9020346|9020346 9021792|9021792|9021792|9021792|9021792 TGTGATG 7mer-m1 dme-miR-11-3p 3R - 9021503 9021611 3'utr neur FlyBase G37165.1 TTAGTGTATGAAACTATCAACTAATTTATCACACGTATGTTTAATTTTTTTGTGATGTTATAAGTAAGTGCGCCCCAGAGCCAAAACTATGTATTGTTCAATCCAACAA 24 9021563 0.993717466 12 22 268 0.925 1.267171728 0.2 0.5 0.7 24 2 1 37 3R:9021503-9021611 7 20 3528 FBgn0002932 466.07 14.63 22.51666667 0.042912009 1.367053999 0.88823094 1 2 1.5 0.15 dme-miR-317-5p 6mer3-8 GTATCC 3R 9042309 9042314 + 3R_9042309_9042314_+ 0.69112278 0.999978469 0.845550624 0.21839396 hyx FBtr0300415|FBtr0081968 9041940|9041940 9042349|9042349 3R + 9042287 9042344 3'utr hyx FlyBase G41258.2 AAACACAAACATCTGAGAGCAAGTATCCTTTGTATTTTTAGTGATAATAAACAGTTAA 16 9042318 0.859263488 8 15 134 0.952380952 1 0.095238095 0.1875 0.380952381 16 0 1 20 3R:9042287-9042344 6 hyx FBtr0300415|FBtr0081968 9041940|9041940 9042349|9042349 GTATCC 6mer3-8 dme-miR-317-5p 3R + 9042291 9042330 3'utr hyx FlyBase G31123.1 ACAAACATCTGAGAGCAAGTATCCTTTGTATTTTTAGTGA 9 9042316 0.70232995 4 9 74 1 1.230448921 0 0.555555556 0.764705882 9 0 0 17 3R:9042291-9042330 6 9.5 3529 FBgn0037657 511.6666667 27.83666667 42.89666667 0.018566775 0.341276494 0.221462429 -9 -7 -8 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 9062211 9062217 + 3R_9062211_9062217_+ 0.641909021 0.655013342 0.648461182 0.009266139 Kdm2 FBtr0300691|FBtr0336760|FBtr0336759|FBtr0336758 9062203|9062203|9062203|9062203 9063245|9063245|9063245|9063245 3R + 9062184 9062232 stop_codon Kdm2 FlyBase G41288.1 CGAAGCTGGCACCACGACTGAGCCACTGGCAGCTGGAGGAGGGCCAATA 43 9062210 0.94716337 3 42 82 0.98 1.389166084 0.32 0.162790698 0.28 43 0 1 49 3R:9062184-9062232 7 Kdm2 FBtr0300691|FBtr0336760|FBtr0336759|FBtr0336758 9062203|9062203|9062203|9062203 9063245|9063245|9063245|9063245 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 9062186 9062244 stop_codon Kdm2 FlyBase G31153.1 AAGCTGGCACCACGACTGAGCCACTGGCAGCTGGAGGAGGGCCAATACATCTTAATCAT 20 9062210 0.836495522 5 19 46 0.964285714 1.431363764 0.178571429 0.3 0.5 20 1 0 27 3R:9062186-9062244 7 27.5 3530 FBgn0037659 729.05 16.58333333 25.47333333 0.037720321 1.658291457 1.079560325 1 1 1 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3R 9062375 9062381 + 3R_9062375_9062381_+ 0.817259076 0.822407571 0.819833324 0.003640539 Kdm2 FBtr0300691|FBtr0336760|FBtr0336759|FBtr0336758 9062203|9062203|9062203|9062203 9063245|9063245|9063245|9063245 3R + 9062235 9062392 3'utr Kdm2 FlyBase G41289.1 TCTTAATCATATGCATTAAGACACCAAACTTTCTAAGCCCCAATCCAGTACCATGTACTCCGAATCCCTCGCCGGAATGCAAGCCAAAGAGTGTCGTCGGGCCCTTTGCATTGCGTGTGGTTATATTCTTAAATGCTAAGCTAGTCAGGATAGGGCTC 34 9062371 0.975682334 12 31 197 0.918918919 1.531478917 0.135135135 0.088235294 0.162162162 34 3 0 34 3R:9062235-9062392 7 Kdm2 FBtr0300691|FBtr0336760|FBtr0336759|FBtr0336758 9062203|9062203|9062203|9062203 9063245|9063245|9063245|9063245 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 9062287 9062445 3'utr Kdm2 FlyBase G31154.1 ATGTACTCCGAATCCCTCGCCGGAATGCAAGCCAAAGAGTGTCGTCGGGCCCTTTGCATTGCGTGTGGTTATATTCTTAAATGCTAAGCTAGTCAGGATAGGGCTCAGGTCATATTCAGGTTCAGGTCTGTTTTTCCGATACCTTTTGAGAATCTCAAA 27 9062371 0.88351406 14 23 190 0.860465116 1.568201724 0.069767442 0.333333333 0.581395349 27 6 0 37 3R:9062287-9062445 7 11.5 3531 FBgn0037659 729.05 16.58333333 25.47333333 0.015773952 0.693467337 0.451452499 4 4 4 0.15 dme-miR-277-3p 6mer3-8 TGCATT 3R 9067663 9067668 - 3R_9067663_9067668_- 0.504453811 0.528129282 0.516291547 0.016741107 pum FBtr0081993|FBtr0333668|FBtr0333667 9067576|9066341|9066341 9070944|9070944|9070944 3R - 9067649 9067767 3'utr pum FlyBase G49273.1 CACAGAGCGAGACCTTTAGTTTTGTAAACCGCGAGCGATTGGCACAAGTTAAATAACTACAATTTGGACAGCATTGCATTCGAGCATTTGATTTAACAATGCATTAGATTTTTATGTTT 44 9067664 0.978270228 14 43 330 0.980392157 1.698970004 0.333333333 0.159090909 0.274509804 44 1 0 50 3R:9067649-9067767 6 pum FBtr0333667|FBtr0333668|FBtr0081993 9066341|9066341|9067576 9070944|9070944|9070944 TGCATT 6mer3-8 dme-miR-277-3p 3R - 9067649 9067773 3'utr pum FlyBase G37211.1 TACAAACACAGAGCGAGACCTTTAGTTTTGTAAACCGCGAGCGATTGGCACAAGTTAAATAACTACAATTTGGACAGCATTGCATTCGAGCATTTGATTTAACAATGCATTAGATTTTTATGTTT 46 9067664 0.981035516 14 43 315 0.953125 1.785329835 0.125 0.347826087 0.53125 46 3 0 61 3R:9067649-9067773 6 23 3532 FBgn0003165 2989.103333 65.03333333 99.94333333 0.007694615 0.353664787 0.230130407 -4 -4 -4 0.15 dme-miR-33-5p 8mer-m1 CAATGCAC 3R 9068884 9068891 - 3R_9068884_9068891_- 0.579467251 0.456637506 0.518052378 0.086853785 pum FBtr0081993|FBtr0333668|FBtr0333667 9067576|9066341|9066341 9070944|9070944|9070944 3R - 9068869 9068943 3'utr pum FlyBase G49275.2 ATTTGTTTGGTACTTTTAGTTATTAACTTGTCAACTGCCTGTCTCTAGAGCGCAATGCACTGATAATTTTAATTT 46 9068904 0.759314812 11 39 380 0.86 1.33243846 0.14 0.086956522 0.16 46 6 1 43 3R:9068869-9068943 8 pum FBtr0333667|FBtr0333668|FBtr0081993 9066341|9066341|9067576 9070944|9070944|9070944 CAATGCAC 8mer-m1 dme-miR-33-5p 3R - 9068868 9068935 3'utr pum FlyBase G37214.1 GGTACTTTTAGTTATTAACTTGTCAACTGCCTGTCTCTAGAGCGCAATGCACTGATAATTTTAATTTA 28 9068888 0.837034004 12 27 234 0.977777778 1.643452676 0.311111111 0.357142857 0.6 28 1 0 44 3R:9068868-9068935 8 21.5 3533 FBgn0003165 2989.103333 65.03333333 99.94333333 0.007192792 0.330599692 0.215121902 13 -3 5 0.15 dme-miR-1006-3p 8mer-A1 CGAATTTA 3R 9069318 9069325 - 3R_9069318_9069325_- 0.671376008 0.671697511 0.671536759 0.000227335 pum FBtr0081993|FBtr0333668|FBtr0333667 9067576|9066341|9066341 9070944|9070944|9070944 3R - 9069292 9069416 3'utr pum FlyBase G49277.1 CATTTTTGATATAAATTTAGATTACTTCGCGACGCCTTATTCCAAATACTAAAATACTGAAAATAATGAAAACGAGAGATGGTAAGAAAATCGAATTTAGACTTTTTTGTCGGTTTCGTCGAAAC 27 9069325 0.908371165 9 24 200 0.931034483 1.431363764 0.413793103 0.074074074 0.137931034 27 2 0 27 3R:9069292-9069416 8 pum FBtr0333667|FBtr0333668|FBtr0081993 9066341|9066341|9067576 9070944|9070944|9070944 CGAATTTA 8mer-A1 dme-miR-1006-3p 3R - 9069306 9069337 3'utr pum FlyBase G37215.1 TGGTAAGAAAATCGAATTTAGACTTTTTTGTC 7 9069326 0.970650807 3 6 53 0.857142857 0.77815125 0.285714286 0 0 7 1 0 6 3R:9069306-9069337 8 9 3534 FBgn0003165 2989.103333 65.03333333 99.94333333 0.003010936 0.138390569 0.090051029 0 1 0.5 0.15 dme-miR-2b-2-5p 6mer2-7 TGAAGA 3R 9070370 9070375 - 3R_9070370_9070375_- 0.999995116 0.999701459 0.999848287 0.000207607 pum FBtr0081993|FBtr0305197|FBtr0333668|FBtr0081994|FBtr0081990|FBtr0081992|FBtr0333667|FBtr0081991 9067576|9069755|9066341|9069755|9069755|9069755|9066341|9069755 9070944|9070944|9070944|9070944|9070944|9070944|9070944|9070944 3R - 9070369 9070442 3'utr pum FlyBase G49281.1 AATTATTATATAGCAAGTCTATCTGTAAATGATTAATGTTTCGACTGTAAATTAATAAGAAGACAACTGAAGAG 10 9070403 0.98930707 7 9 86 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 3R:9070369-9070442 6 pum FBtr0333667|FBtr0081991|FBtr0081990|FBtr0081992|FBtr0333668|FBtr0081994|FBtr0081993|FBtr0305197 9066341|9069755|9069755|9069755|9066341|9069755|9067576|9069755 9070944|9070944|9070944|9070944|9070944|9070944|9070944|9070944 TGAAGA 6mer2-7 dme-miR-2b-2-5p 3R - 9070358 9070416 3'utr pum FlyBase G37220.1 AAATGATTAATGTTTCGACTGTAAATTAATAAGAAGACAACTGAAGAGCCGGCGAGCTG 10 9070395 0.972702496 6 10 49 1 1.322219295 0.19047619 0.7 0.857142857 10 0 0 21 3R:9070358-9070416 6 2.5 3535 FBgn0003165 2989.103333 65.03333333 99.94333333 0.000836371 0.038441825 0.025014175 28 20 24 0.15 dme-miR-1002-5p 6mer3-8 CTACTT 3R 9238376 9238381 - 3R_9238376_9238381_- 0.57245388 0.691813318 0.632133599 0.084399841 D1 FBtr0081988|FBtr0301524|FBtr0081987 9238081|9238081|9238081 9238518|9238518|9238518 3R - 9238342 9238411 3'utr D1 FlyBase G49317.1 AAGAGAAGAAAACACAAAAATGGATAGGACCTACTTGGACTTTAGAGAACCTTCCCCTCCTAAAACAACA 45 9238376 0.968541191 8 44 246 1 1.69019608 0.224489796 0.088888889 0.163265306 45 0 0 49 3R:9238342-9238411 6 D1 FBtr0081987|FBtr0081988|FBtr0301524 9238081|9238081|9238081 9238518|9238518|9238518 CTACTT 6mer3-8 dme-miR-1002-5p 3R - 9238296 9238393 3'utr D1 FlyBase G37248.1 AATGGATAGGACCTACTTGGACTTTAGAGAACCTTCCCCTCCTAAAACAACACACTTTGTCTACATATATATTCCGATTTATTGCTGAGAAATCGGAC 24 9238376 0.825429496 9 24 145 1 1.491361694 0.193548387 0.291666667 0.451612903 24 0 0 31 3R:9238296-9238393 6 25 3536 FBgn0000412 3413.53 239.6433333 366.14 0.007323797 0.1043217 0.068279893 -5 -5 -5 0.15 dme-miR-965-3p 7mer-m8 TACGCTT 3R 9262231 9262237 + 3R_9262231_9262237_+ 0.620201028 0.620201201 0.620201115 1.41E-07 VhaM8.9 FBtr0081978 9262171 9262590 3R + 9262202 9262590 3'utr VhaM8.9 FlyBase G41311.1 GGAGCAGGAGGAGCGAGAGGAGCTTGCGTTACGCTTTGTTATTTCGTCCCCCTTTTAAGTTGAAATTTGCCAACTTCTACTTCAATCCAACAGCGGATAAATTGTGTGTTTGTGTGTGTGCGGACAGCTGTCGCAGTAGTTGGTTTTATTATCTATAAATAAGTATTAAAAAACTTTTCAGTTTTCAATGCAGTTGCGGGCGTCGCAACAATTCCATAGAAATTTGTTACATTTTCCTGTTTTGTTGTACTTTTTAGGTTTATATATATATACGAATATGCACAACATACTCGCCAAGTCAGTCAGTTCTTCAAACGATTCATCATATGTAAATTATCAAAATGTGAAGTGTTGAAAAGTAAAGTTAAATATATATAGCCTAAAAAGAC 245 9262243 0.986978018 54 234 2045 0.954063604 1.954242509 0.130742049 0.126530612 0.243816254 245 11 2 270 3R:9262202-9262590 7 VhaM8.9 FBtr0081978 9262171 9262590 TACGCTT 7mer-m8 dme-miR-965-3p 3R + 9262203 9262537 3'utr VhaM8.9 FlyBase G31173.1 GAGCAGGAGGAGCGAGAGGAGCTTGCGTTACGCTTTGTTATTTCGTCCCCCTTTTAAGTTGAAATTTGCCAACTTCTACTTCAATCCAACAGCGGATAAATTGTGTGTTTGTGTGTGTGCGGACAGCTGTCGCAGTAGTTGGTTTTATTATCTATAAATAAGTATTAAAAAACTTTTCAGTTTTCAATGCAGTTGCGGGCGTCGCAACAATTCCATAGAAATTTGTTACATTTTCCTGTTTTGTTGTACTTTTTAGGTTTATATATATATACGAATATGCACAACATACTCGCCAAGTCAGTCAGTTCTTCAAACGATTCATCATATGTAAATTA 196 9262240 0.987083951 41 182 1597 0.942028986 2.414973348 0.09057971 0.31122449 0.510869565 196 16 0 260 3R:9262203-9262537 7 119 3537 FBgn0037671 995.7833333 82.36 125.1466667 0.119503908 1.444876153 0.950884296 -12 -9 -10.5 0.15 dme-miR-932-5p 7mer-A1 GAATTGA 3R 9265156 9265162 - 3R_9265156_9265162_- 0.517502937 0.56376454 0.540633738 0.032711891 Aats-trp FBtr0081981 9265025 9265303 3R - 9265098 9265182 3'utr Aats-trp FlyBase G49330.1 TCTATGTAAATAGCTATACAGAATTGATCTATGCCTTGGCTCTGAGTCCGTGTGGCGCCCACTTAATGCATCGTTGTACTCGCTA 188 9265159 0.816930697 15 173 1501 0.92760181 1.834632606 0.045248869 0.14893617 0.2760181 188 14 2 205 3R:9265098-9265182 7 Aats-trp FBtr0081981 9265025 9265303 GAATTGA 7mer-A1 dme-miR-932-5p 3R - 9265097 9265182 3'utr Aats-trp FlyBase G37261.1 TCTATGTAAATAGCTATACAGAATTGATCTATGCCTTGGCTCTGAGTCCGTGTGGCGCCCACTTAATGCATCGTTGTACTCGCTAT 115 9265159 0.825906891 12 108 907 0.924731183 2.235528447 0.032258065 0.426086957 0.64516129 115 14 0 172 3R:9265097-9265182 7 129.5 3538 FBgn0010803 589.9133333 43.03333333 65.91666667 0.219523772 3.00929512 1.96460177 -3 -3 -3 0.15 dme-miR-184-3p 6mer2-7 CCGTCC 3R 9336935 9336940 + 3R_9336935_9336940_+ 0.930890882 0.999619619 0.96525525 0.04859853 CG8121 FBtr0082019|FBtr0082017|FBtr0082018 9336879|9336879|9336879 9337256|9337459|9337256 3R + 9336893 9336949 3'utr CG8121 FlyBase G41324.1 CCATCCATCTATGGGGCTCACAACGAAATTGCACAATCTAGACCGTCCGAATGCAGC 33 9336929 0.740431468 6 25 132 0.769230769 0.698970004 0.538461538 0.151515152 0.282051282 33 4 5 30 3R:9336893-9336949 6 CG8121 FBtr0082018|FBtr0082019|FBtr0082017 9336879|9336879|9336879 9337256|9337256|9337459 CCGTCC 6mer2-7 dme-miR-184-3p 3R + 9336893 9336949 3'utr CG8121 FlyBase G31182.1 CCATCCATCTATGGGGCTCACAACGAAATTGCACAATCTAGACCGTCCGAATGCAGC 37 9336930 0.691141085 6 29 143 0.770833333 0.723103684 0.4375 0.243243243 0.416666667 37 5 6 37 3R:9336893-9336949 6 27.5 3539 FBgn0037680 158.3566667 13.87333333 21.06666667 0.173658619 1.982220086 1.305379747 6 5 5.5 0.15 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 9337092 9337099 + 3R_9337092_9337099_+ 0.630661041 0.630681729 0.630671385 1.46E-05 CG8121 FBtr0082019|FBtr0082017|FBtr0082018 9336879|9336879|9336879 9337256|9337459|9337256 3R + 9337060 9337123 3'utr CG8121 FlyBase G41326.1 CCGCGAATCAGCGTAATTAGTTGTAAGTCTATTCCGTCCAAACGCATATGTTTTTTGTATACTG 2080 9337091 0.771501834 9 2052 17253 0.987304274 2.367914739 0.185780787 0.118269231 0.223867964 2080 21 9 2333 3R:9337060-9337123 8 CG8121 FBtr0082018|FBtr0082019|FBtr0082017 9336879|9336879|9336879 9337256|9337256|9337459 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R + 9337063 9337146 3'utr CG8121 FlyBase G31184.1 CGAATCAGCGTAATTAGTTGTAAGTCTATTCCGTCCAAACGCATATGTTTTTTGTATACTGTTGAAGAATCGCTGTCTTTATGT 1227 9337091 0.793610762 11 1204 9760 0.984324324 2.260309946 0.165945946 0.380603097 0.589189189 1227 20 9 1821 3R:9337063-9337146 8 1650 3540 FBgn0037680 158.3566667 13.87333333 21.06666667 10.41951712 118.9332052 78.32278481 1 1 1 0.15 dme-miR-263a-5p 6mer3-8 GTGCCA 3R 9358416 9358421 + 3R_9358416_9358421_+ 0.737573176 0.474120885 0.605847031 0.186288908 CG45050 FBtr0344364|FBtr0344370|FBtr0344363|FBtr0344367|FBtr0344369|FBtr0344365|FBtr0344368|FBtr0344366 9358403|9358403|9358403|9358403|9358403|9358403|9358403|9358403 9359189|9359189|9362994|9362994|9359189|9362994|9359189|9362994 3R + 9358398 9358516 stop_codon CG45050 FlyBase G41342.2 GATTTGAATTTCGATATTGTGCCAGTAACAGTAACAGTAGCCGTAGAATGATAATAACCAACTACACATGATAAGAGTACATATATATATATATGCTGCGCTATAACAAGGAAAGCAAC 57 9358415 0.973300235 18 53 331 0.9375 1.77815125 0.1875 0.105263158 0.203125 57 4 0 60 3R:9358398-9358516 6 CG45050 FBtr0344367|FBtr0344363|FBtr0344370|FBtr0344364|FBtr0344366|FBtr0344368|FBtr0344365|FBtr0344369 9358403|9358403|9358403|9358403|9358403|9358403|9358403|9358403 9362994|9362994|9359189|9359189|9362994|9359189|9362994|9359189 GTGCCA 6mer3-8 dme-miR-263a-5p 3R + 9358394 9358516 stop_codon CG45050 FlyBase G31201.1 AAAAGATTTGAATTTCGATATTGTGCCAGTAACAGTAACAGTAGCCGTAGAATGATAATAACCAACTACACATGATAAGAGTACATATATATATATATGCTGCGCTATAACAAGGAAAGCAAC 33 9358414 0.970867391 13 31 182 0.944444444 1.707570176 0.222222222 0.484848485 0.685185185 33 3 0 51 3R:9358394-9358516 6 20.5 3541 FBgn0266410 13462.35667 672.7966667 1034.65 0.001522765 0.03046983 0.019813463 1 2 1.5 0.15 dme-miR-307a-3p 6mer2-7 GTTGTG 3R 9359487 9359492 + 3R_9359487_9359492_+ 0.99644047 0.828757624 0.912599047 0.118569716 CG45050 FBtr0344363|FBtr0344367|FBtr0344365|FBtr0344366 9358403|9358403|9358403|9358403 9362994|9362994|9362994|9362994 3R + 9359465 9359516 3'utr CG45050 FlyBase G41346.1 AAAAGAAACAAAGAATAACGCAGTTGTGTAGAGCTCCCTAAAAAGTTTGCTA 7 9359489 0.964368623 5 7 41 1 0.84509804 0.142857143 0 0 7 0 0 7 3R:9359465-9359516 6 CG45050 FBtr0344367|FBtr0344363|FBtr0344366|FBtr0344365 9358403|9358403|9358403|9358403 9362994|9362994|9362994|9362994 GTTGTG 6mer2-7 dme-miR-307a-3p 3R + 9359443 9359503 3'utr CG45050 FlyBase G31204.1 AAAATGTAAAAAAAACCTGAAGAAAAGAAACAAAGAATAACGCAGTTGTGTAGAGCTCCCT 8 9359488 0.789101953 4 7 28 1 1 0 0.125 0.3 8 0 0 10 3R:9359443-9359503 6 6 3542 FBgn0266410 13462.35667 672.7966667 1034.65 0.000445687 0.008917999 0.005799062 -2 -1 -1.5 0.15 dme-miR-33-5p 6mer2-7 AATGCA 3R 9359684 9359689 + 3R_9359684_9359689_+ 0.60770863 0.541183155 0.574445892 0.047040561 CG45050 FBtr0344363|FBtr0344367|FBtr0344365|FBtr0344366 9358403|9358403|9358403|9358403 9362994|9362994|9362994|9362994 3R + 9359664 9359846 3'utr CG45050 FlyBase G41348.1 TTAGTGAATCAAAGCAGGCGAATGCAGTGCAAGCGGCGTTTTTTCTTCGTTTTACTTTTTGCCCTCCTGTCCCTCTAACATTAAATTGAATTGATTTTAATTTTCTGATTTGCGATGAATTATATATATATATATGCATAATATTAACTATATCTACATCTATATATGTATGGTAGGATATGT 175 9359686 0.973776482 25 169 1043 0.970149254 1.989004616 0.263681592 0.125714286 0.23880597 175 5 1 195 3R:9359664-9359846 6 CG45050 FBtr0344367|FBtr0344363|FBtr0344366|FBtr0344365 9358403|9358403|9358403|9358403 9362994|9362994|9362994|9362994 AATGCA 6mer2-7 dme-miR-33-5p 3R + 9359531 9359791 3'utr CG45050 FlyBase G31205.1 CGCTAGACACGAGCGAGAGAGAGTATAGCTATATAGAGAGAGAGAGAGAGAGCGGAGAAGCGCGATTAGTGTAAAGCAACGTGGAGCATAACAACTCCCCTATACATAGAAATCTAAATATAATTATAATTAATTAGTGAATCAAAGCAGGCGAATGCAGTGCAAGCGGCGTTTTTTCTTCGTTTTACTTTTTGCCCTCCTGTCCCTCTAACATTAAATTGAATTGATTTTAATTTTCTGATTTGCGATGAATTATATATA 155 9359686 0.990584733 28 143 877 0.932773109 1.443262987 0.256302521 0.361290323 0.584033613 155 9 7 222 3R:9359531-9359791 6 75 3543 FBgn0266410 13462.35667 672.7966667 1034.65 0.00557109 0.111474987 0.072488281 -2 -2 -2 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 3R 9368024 9368029 - 3R_9368024_9368029_- 0.992516697 0.999999966 0.996258332 0.005291492 FER FBtr0333295|FBtr0082054|FBtr0082053|FBtr0082051|FBtr0082052|FBtr0333296 9367601|9367601|9367601|9367601|9367601|9367601 9368240|9368240|9368240|9368240|9368240|9368240 3R - 9367962 9368079 3'utr FER FlyBase G49345.1 ATATATATTTTCTAGCCATGTAAATGTAAATTTCGATGTGTACTGTAGTGTGTGTTTGCCTGACTGAGCGTATGTTATAAATCCTTAATGTGCCAAAAACCGCAAGAGATCTTAAAAC 50 9368022 0.983521793 18 49 380 0.981481481 1.72427587 0.185185185 0.08 0.148148148 50 1 0 53 3R:9367962-9368079 6 FER FBtr0082052|FBtr0333296|FBtr0082053|FBtr0082051|FBtr0333295|FBtr0082054 9367601|9367601|9367601|9367601|9367601|9367601 9368240|9368240|9368240|9368240|9368240|9368240 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 9367976 9368077 3'utr FER FlyBase G37273.1 ATATATTTTCTAGCCATGTAAATGTAAATTTCGATGTGTACTGTAGTGTGTGTTTGCCTGACTGAGCGTATGTTATAAATCCTTAATGTGCCAAAAACCGCA 26 9368021 0.988657695 13 24 224 0.888888889 1.505149978 0.416666667 0.346153846 0.527777778 26 4 0 32 3R:9367976-9368077 6 23 3544 FBgn0000723 580.6066667 19.26 29.57333333 0.039613737 1.194184839 0.777727683 -7 -8 -7.5 0.15 dme-miR-276a-3p 6mer2-7 GTTCCT 3R 9407808 9407813 + 3R_9407808_9407813_+ 0.99985091 0.998940658 0.999395784 0.000643609 CG8135 FBtr0082030 9407708 9407857 3R + 9407741 9407825 3'utr CG8135 FlyBase G41359.1 TCGTTACCGAGTATCTCAATATTTCGCTCGCGCTTAAGTATTTCCCGATGCCACTGCTGCTGCTGCTGTTCCTTTACACCCATGT 39 9407814 0.982540892 12 37 357 0.954545455 1.62324929 0.045454545 0.128205128 0.227272727 39 2 0 42 3R:9407741-9407825 6 CG8135 FBtr0082030 9407708 9407857 GTTCCT 6mer2-7 dme-miR-276a-3p 3R + 9407765 9407825 3'utr CG8135 FlyBase G31212.1 CGCTCGCGCTTAAGTATTTCCCGATGCCACTGCTGCTGCTGCTGTTCCTTTACACCCATGT 32 9407802 0.766737283 11 29 303 0.953488372 1.311753861 0 0.25 0.441860465 32 1 1 41 3R:9407765-9407825 6 27.5 3545 FBgn0037689 259 11.38666667 17.50333333 0.106177606 2.415105386 1.571129309 -6 6 0 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 9417032 9417038 + 3R_9417032_9417038_+ 0.725532729 0.759250643 0.742391686 0.023842156 alpha-Man-II FBtr0082031|FBtr0082031|FBtr0082031|FBtr0334302|FBtr0334302|FBtr0334302 9416737|9416737|9416737|9416737|9416737|9416737 9417264|9417264|9417264|9417264|9417264|9417264 3R + 9417023 9417061 3'utr alpha-Man-II FlyBase G41367.1 ACGTTTTTTTGTGATATCCATCCAGTCCCACAGCAAGCA 10 9417043 0.954162842 4 10 57 1 1 0.3 0 0 10 0 0 10 3R:9417023-9417061 7 alpha-Man-II FBtr0334302|FBtr0334302|FBtr0334302|FBtr0082031|FBtr0082031|FBtr0082031 9416737|9416737|9416737|9416737|9416737|9416737 9417264|9417264|9417264|9417264|9417264|9417264 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 9417023 9417060 3'utr alpha-Man-II FlyBase G31216.1 ACGTTTTTTTGTGATATCCATCCAGTCCCACAGCAAGC 12 9417031 0.958834939 3 12 90 1 1.255272505 0.166666667 0.5 0.666666667 12 0 0 18 3R:9417023-9417060 7 10.5 3546 FBgn0011740 533.3733333 16.09 24.62333333 0.019686024 0.652579242 0.4264248 -11 1 -5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 9446922 9446929 + 3R_9446922_9446929_+ 0.631103401 0.631104303 0.631103852 6.36E-07 ps FBtr0082037|FBtr0111030 9446525|9446525 9449468|9449468 3R + 9446714 9446998 3'utr ps FlyBase G41395.1 TAATTTGGCCCTAGAGCCCATTAGACATAGAAACAAAAGCCAAGCAGACACAGGCACATCATTGCAGACTCATTCCAGAGAGAGAAAAGAGGGTACGACTTATTGAGAGAGATATCCCATTCTAAGCATACAACGCATTCCGTGAGACATTCCGATAGACATTCGCAAAGGCTTTCCCAATAAATTCATTGACACTTATAGCGAAATTTCTAGTCAAGTTCTTGCCTCTCACCCATCCGCCAGCATATATGATCCATGATCCATGATCCGTCTTCGATATTGCAC 1093 9446921 0.966116545 44 1050 8281 0.965883245 2.628048173 0.081122062 0.16010979 0.304018196 1093 43 2 1274 3R:9446714-9446998 8 ps FBtr0082037|FBtr0111030 9446525|9446525 9449468|9449468 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 9446751 9446954 3'utr ps FlyBase G31242.1 AGCCAAGCAGACACAGGCACATCATTGCAGACTCATTCCAGAGAGAGAAAAGAGGGTACGACTTATTGAGAGAGATATCCCATTCTAAGCATACAACGCATTCCGTGAGACATTCCGATAGACATTCGCAAAGGCTTTCCCAATAAATTCATTGACACTTATAGCGAAATTTCTAGTCAAGTTCTTGCCTCTCACCCATCCGCC 612 9446921 0.982250215 24 587 4363 0.962039046 2.470802365 0.093275488 0.35130719 0.569414317 612 33 2 887 3R:9446751-9446954 8 755 3547 FBgn0261552 4666.596667 115.7866667 177.5266667 0.161788141 6.520612621 4.252882196 1 1 1 0.15 dme-miR-92b-3p 8mer-m1 GTGCAATT 3R 9447239 9447246 + 3R_9447239_9447246_+ 0.588912562 0.589875794 0.589394178 0.000681085 ps FBtr0082037|FBtr0111030 9446525|9446525 9449468|9449468 3R + 9447049 9447262 3'utr ps FlyBase G41396.1 CCCAACCCAGAAAATTCGCACAGAACAGCAGCATCCGATAGCTTAGGATTATAAGGCAGTAATTAGGTTTAGCAGTTAGGTTGTGCATTGAGTAGATTGAATAAAACACATTCACTTTTCCATGTTGTTTAGGCCTAACGAATTTGTTCGATATACTTACGTGTAGCTGGGCGGATCGCCCAGTTGGCTAGTGCAATTCGTGGGTAACCATGCG 97 9447233 0.984852961 35 84 664 0.885964912 2.004321374 0.201754386 0.164948454 0.289473684 97 13 0 101 3R:9447049-9447262 8 ps FBtr0082037|FBtr0111030 9446525|9446525 9449468|9449468 GTGCAATT 8mer-m1 dme-miR-92b-3p 3R + 9447166 9447264 3'utr ps FlyBase G31245.1 TTCCATGTTGTTTAGGCCTAACGAATTTGTTCGATATACTTACGTGTAGCTGGGCGGATCGCCCAGTTGGCTAGTGCAATTCGTGGGTAACCATGCGTA 33 9447233 0.975344911 14 33 207 1 1.755874856 0.192982456 0.424242424 0.666666667 33 0 0 57 3R:9447166-9447264 8 29.5 3548 FBgn0261552 4666.596667 115.7866667 177.5266667 0.006321523 0.254778904 0.166172218 6 6 6 0.15 dme-miR-980-5p 7mer-A1 AAAAACA 3R 9449286 9449292 + 3R_9449286_9449292_+ 0.780546762 0.78120611 0.780876436 0.000466196 ps FBtr0111032|FBtr0302692|FBtr0082037|FBtr0344283|FBtr0111030 9447848|9447848|9446525|9447848|9446525 9455500|9455500|9449468|9455500|9449468 3R + 9449282 9449346 5'utr ps FlyBase G41408.1 AAAAAAAAACACATTGCGATTTGTTAGTTGCCAGTCTGAGAACTGCACTTCTTACCTTTTTACTT 43 9449309 0.918239051 12 42 333 0.965517241 1.271066772 0.189655172 0.255813953 0.448275862 43 0 2 56 3R:9449282-9449346 7 ps FBtr0111032|FBtr0344283|FBtr0082037|FBtr0111030|FBtr0302692 9447848|9447848|9446525|9446525|9447848 9455500|9455500|9449468|9449468|9455500 AAAAACA 7mer-A1 dme-miR-980-5p 3R + 9449281 9449342 5'utr ps FlyBase G31252.1 AAAAAAAAAACACATTGCGATTTGTTAGTTGCCAGTCTGAGAACTGCACTTCTTACCTTTTT 16 9449308 0.979999002 10 16 118 1 1.361727836 0.217391304 0.3125 0.52173913 16 0 0 23 3R:9449281-9449342 7 21.5 3549 FBgn0261552 4666.596667 115.7866667 177.5266667 0.004607212 0.18568632 0.121108566 -23 -22 -22.5 0.15 dme-miR-1012-3p 7mer-m8 TTGACTA 3R 9449927 9449933 + 3R_9449927_9449933_+ 0.544712587 0.539820802 0.542266695 0.003459025 ps FBtr0111032|FBtr0302692|FBtr0344283 9447848|9447848|9447848 9455500|9455500|9455500 3R + 9449918 9449944 3'utr ps FlyBase G41412.1 AAATAAAATTTGACTACAAAACCAACA 7 9449927 0.95609763 3 5 23 0.8 0.903089987 0 0.428571429 0.6 7 2 0 8 3R:9449918-9449944 7 ps FBtr0111032|FBtr0344283|FBtr0302692 9447848|9447848|9447848 9455500|9455500|9455500 TTGACTA 7mer-m8 dme-miR-1012-3p 3R + 9449910 9449940 3'utr ps FlyBase G31255.1 CGAAATTTAAATAAAATTTGACTACAAAACC 5 9449927 0.900985604 2 5 22 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:9449910-9449940 7 5.5 3550 FBgn0261552 4666.596667 115.7866667 177.5266667 0.001178589 0.047501152 0.030981261 0 0 0 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 9451274 9451281 + 3R_9451274_9451281_+ 0.635133912 0.621164602 0.628149257 0.009877787 ps FBtr0111032|FBtr0111032|FBtr0111032|FBtr0302692|FBtr0302692|FBtr0302692|FBtr0344283|FBtr0344283|FBtr0344283 9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848 9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500 3R + 9451253 9451297 3'utr ps FlyBase G41415.2 ATACTTATATTTGTACTGGATCTGTGATATGTATTTAAAAACAAC 198 9451273 0.833646553 11 193 2175 0.974358974 2.357934847 0.05982906 0.176767677 0.303418803 198 6 0 228 3R:9451253-9451297 8 ps FBtr0111032|FBtr0111032|FBtr0111032|FBtr0344283|FBtr0344283|FBtr0344283|FBtr0302692|FBtr0302692|FBtr0302692 9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848 9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 9451253 9451301 3'utr ps FlyBase G31256.1 ATACTTATATTTGTACTGGATCTGTGATATGTATTTAAAAACAACAAAG 159 9451273 0.795989041 12 153 1644 0.974895397 2.367355921 0.129707113 0.364779874 0.577405858 159 6 0 233 3R:9451253-9451301 8 177.5 3551 FBgn0261552 4666.596667 115.7866667 177.5266667 0.038036285 1.532991709 0.999849788 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 9453053 9453059 + 3R_9453053_9453059_+ 0.796629811 0.801016362 0.798823086 0.003101795 ps FBtr0111032|FBtr0111032|FBtr0111032|FBtr0302692|FBtr0302692|FBtr0302692|FBtr0344283|FBtr0344283|FBtr0344283 9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848 9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500 3R + 9453030 9453070 3'utr ps FlyBase G41419.1 AAGGTATAAAACGTAGTCGTTAGTGTGATAAATAAAATTAA 11 9453051 0.976462237 6 11 78 1 1.113943352 0.076923077 0.181818182 0.307692308 11 0 0 13 3R:9453030-9453070 7 ps FBtr0111032|FBtr0111032|FBtr0111032|FBtr0344283|FBtr0344283|FBtr0344283|FBtr0302692|FBtr0302692|FBtr0302692 9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848 9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 9453016 9453071 3'utr ps FlyBase G31258.1 ATACACATACACTAAAGGTATAAAACGTAGTCGTTAGTGTGATAAATAAAATTAAT 8 9453052 0.975598725 4 8 52 1 1.041392685 0.181818182 0.375 0.545454545 8 0 0 11 3R:9453016-9453071 7 8.5 3552 FBgn0261552 4666.596667 115.7866667 177.5266667 0.001821456 0.073410871 0.047880131 2 1 1.5 0.15 dme-miR-33-5p 6mer3-8 CAATGC 3R 9505795 9505800 + 3R_9505795_9505800_+ 0.986817883 0.944444107 0.965630995 0.029962801 CG8149 FBtr0082061 9505704 9505865 3R + 9505754 9505833 3'utr CG8149 FlyBase G41425.1 TTCGGGAGTAGGCCCTATCATGTATCAAACCCCAAAGCCACCAATGCTTGTAGTAATTAAGCAAAAATTCAATAAACACA 12 9505800 0.936535731 4 12 48 1 1.204119983 0.0625 0.333333333 0.5 12 0 0 16 3R:9505754-9505833 6 CG8149 FBtr0082061 9505704 9505865 CAATGC 6mer3-8 dme-miR-33-5p 3R + 9505786 9505836 3'utr CG8149 FlyBase G31260.1 CAAAGCCACCAATGCTTGTAGTAATTAAGCAAAAATTCAATAAACACAAAA 5 9505801 0.962290978 4 4 20 1 0.903089987 0 0.5 0.75 4 0 0 8 3R:9505786-9505836 6 5 3553 FBgn0037700 973.67 104.3033333 159.9166667 0.00513521 0.047937107 0.031266285 -5 -6 -5.5 0.15 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3R 9506042 9506047 - 3R_9506042_9506047_- 0.905666373 0.912912065 0.909289219 0.005123484 rump FBtr0304684|FBtr0082123 9505851|9505851 9507316|9506143 3R - 9506025 9506155 stop_codon rump FlyBase G49389.1 ACATACTTTTAAGTCAGGCAATTCAGTTCAAAAGTTATTCTACGTTTCTTGTCGCCAATTCACACTTCAAACAGCGCGATGACCAATGAAATGAGCTGATATTCCTTATTTGACTCGCAATACGGAATTAA 30 9506045 0.984167922 11 29 228 0.96875 1.491361694 0.3125 0.066666667 0.125 30 1 0 31 3R:9506025-9506155 6 rump FBtr0304684|FBtr0082123 9505851|9505851 9507316|9506143 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3R - 9506025 9506084 3'utr rump FlyBase G37306.1 CAGCGCGATGACCAATGAAATGAGCTGATATTCCTTATTTGACTCGCAATACGGAATTAA 15 9506046 0.828823174 8 15 100 1 1.322219295 0.238095238 0.266666667 0.476190476 15 0 0 21 3R:9506025-9506084 6 11.5 3554 FBgn0267790 1132.323333 61.17 93.53666667 0.01015611 0.188000654 0.122946438 -2 -1 -1.5 0.15 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 9507272 9507278 - 3R_9507272_9507278_- 0.765879797 0.76296592 0.764422859 0.002060438 rump FBtr0304684 9505851 9507316 3R - 9507095 9507364 stop_codon rump FlyBase G49398.2 AGAAGCTCAAGCAGGTCTTCAAGCTGGCCGGCAAGGTGCAGAGCGTAGACCTTTCACTGGACAAGGAGGGCAACAGCCGCGGTTTTGCTGTGATCGAGTACGACCATCCGGTGGAGGCTGTTCAGGCCATTTCCATGCTGGATCGTCAGATGCTATTCGACCGTCGTATGACCGTGCGCCTGGACCGAATTCCGGATAAGAATGAAGGCATAAAGCTGCCCGAGGGCTTGGGAGGTGTGGGCATCGGCCTGGGACCCAACGGCGAGCCAC 159 9507280 0.994492437 32 153 828 0.97382199 1.792391689 0.188481675 0.169811321 0.308900524 159 3 2 186 3R:9507095-9507364 7 rump FBtr0304684 9505851 9507316 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R - 9507131 9507318 stop_codon rump FlyBase G37314.1 AGACCTTTCACTGGACAAGGAGGGCAACAGCCGCGGTTTTGCTGTGATCGAGTACGACCATCCGGTGGAGGCTGTTCAGGCCATTTCCATGCTGGATCGTCAGATGCTATTCGACCGTCGTATGACCGTGCGCCTGGACCGAATTCCGGATAAGAATGAAGGCATAAAGCTGCCCGAGGGCTTGGGAG 89 9507280 0.973948721 21 82 503 0.943262411 2.123851641 0.219858156 0.449438202 0.65248227 89 8 0 133 3R:9507131-9507318 7 67.5 3555 FBgn0267790 1132.323333 61.17 93.53666667 0.059611948 1.103482099 0.721642137 2 2 2 0.15 dme-miR-92b-3p 8mer-m1 GTGCAATT 3R 9511342 9511349 - 3R_9511342_9511349_- 0.596553202 0.579114515 0.587833858 0.012331023 Ras85D FBtr0082122 9510559 9511507 3R - 9511330 9511379 3'utr Ras85D FlyBase G49409.1 AAACACACACATGTGGGAGCGTGTTGGTCGGTGCAATTGTCAGATAAAAG 28 9511343 0.864359564 6 27 156 0.967741935 1.477121255 0.258064516 0.107142857 0.193548387 28 1 0 30 3R:9511330-9511379 8 Ras85D FBtr0082122 9510559 9511507 GTGCAATT 8mer-m1 dme-miR-92b-3p 3R - 9511325 9511365 3'utr Ras85D FlyBase G37327.1 GGGAGCGTGTTGGTCGGTGCAATTGTCAGATAAAAGAAGAG 8 9511343 0.828602163 3 7 46 1 1.079181246 0.5 0.25 0.5 8 0 0 12 3R:9511325-9511365 8 15.5 3556 FBgn0003205 1314.34 81.98666667 125.6566667 0.011792991 0.189055131 0.123351991 -6 -6 -6 0.15 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 9536064 9536070 - 3R_9536064_9536070_- 0.509258462 0.46092543 0.485091946 0.034176663 mura FBtr0082116 9535623 9539095 3R - 9536022 9536096 3'utr mura FlyBase G49422.1 ACAAACAAAAAAAATTATAAAGTTTTGCTGTGATGTACGTTATATATATTTAATTACATAAAATGCAATAAAATT 185 9536072 0.991835807 10 178 1989 0.964444444 2.035429738 0.062222222 0.183783784 0.328888889 185 7 1 217 3R:9536022-9536096 7 mura FBtr0082116 9535623 9539095 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R - 9536043 9536096 3'utr mura FlyBase G37344.1 ACAAACAAAAAAAATTATAAAGTTTTGCTGTGATGTACGTTATATATATTTAAT 135 9536072 0.891468887 10 128 1418 0.930693069 2.274157849 0.059405941 0.333333333 0.554455446 135 14 0 188 3R:9536043-9536096 7 158.5 3557 FBgn0037705 215.4033333 4.16 6.31 0.73582891 38.10096154 25.11885895 2 2 2 0.15 dme-miR-79-3p 6mer3-8 TAGCTT 3R 9538817 9538822 - 3R_9538817_9538822_- 0.999999867 0.999725361 0.999862614 0.000194101 mura FBtr0082118|FBtr0082117|FBtr0082116 9538152|9538152|9535623 9539095|9539095|9539095 3R - 9538766 9538840 3'utr mura FlyBase G49428.1 AACTCGCCGCCTCTTCAATAGCTTGTCTTAGACATTAGTTCGTATGTGAGTAATGGTAACCGTAATTAGGAGTAA 24 9538822 0.987243422 7 24 208 1 1.397940009 0 0.041666667 0.08 24 0 0 25 3R:9538766-9538840 6 mura FBtr0082118|FBtr0082117|FBtr0082116 9538152|9538152|9535623 9539095|9539095|9539095 TAGCTT 6mer3-8 dme-miR-79-3p 3R - 9538795 9538838 3'utr mura FlyBase G37348.1 CTCGCCGCCTCTTCAATAGCTTGTCTTAGACATTAGTTCGTATG 13 9538813 0.845101812 4 10 116 0.823529412 0.84509804 0.058823529 0.230769231 0.411764706 13 2 1 14 3R:9538795-9538838 6 16.5 3558 FBgn0037705 215.4033333 4.16 6.31 0.076600486 3.966346154 2.614896989 0 -9 -4.5 0.15 dme-miR-79-3p 6mer2-7 AGCTTT 3R 9539063 9539068 - 3R_9539063_9539068_- 0.980065279 0.769776842 0.87492106 0.148696424 mura FBtr0082118|FBtr0082117|FBtr0082116 9538152|9538152|9535623 9539095|9539095|9539095 3R - 9539014 9539076 3'utr mura FlyBase G49430.1 ACACCTCAAGCTTTCGCTTTTCCGGGCGATGAGTGATCGGGACAGAGGAGCATTCCGGGCGTG 13 9539064 0.974933047 6 12 76 1 1.204119983 0.0625 0.230769231 0.375 13 0 0 16 3R:9539014-9539076 6 mura FBtr0082118|FBtr0082117|FBtr0082116 9538152|9538152|9535623 9539095|9539095|9539095 AGCTTT 6mer2-7 dme-miR-79-3p 3R - 9539044 9539083 3'utr mura FlyBase G37349.1 ATTCCACACACCTCAAGCTTTCGCTTTTCCGGGCGATGAG 5 9539057 0.976117145 3 5 35 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 3R:9539044-9539083 6 7.5 3559 FBgn0037705 215.4033333 4.16 6.31 0.034818403 1.802884615 1.18858954 -4 -11 -7.5 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 9557507 9557514 + 3R_9557507_9557514_+ 0.625364269 0.625169228 0.625266748 0.000137957 CG8199 FBtr0082067 9557435 9557776 3R + 9557435 9557527 stop_codon CG8199 FlyBase G41466.2 AGATTCCAGATAGGTGCCATAAAGATGCTAACAAATCAGAAATCAAAACGAACCGAGAGACTCGATCGAAAGTGCATTTATTATGATTAAGCA 26 9557513 0.873772367 11 21 135 0.909090909 1.176091259 0.212121212 0.153846154 0.333333333 26 2 1 30 3R:9557435-9557527 8 CG8199 FBtr0082067 9557435 9557776 TGCATTTA 8mer-A1 dme-miR-277-3p 3R + 9557471 9557533 3'utr CG8199 FlyBase G31285.2 CAGAAATCAAAACGAACCGAGAGACTCGATCGAAAGTGCATTTATTATGATTAAGCAATAGGC 14 9557513 0.979985702 6 10 72 0.857142857 1.255272505 0.380952381 0.428571429 0.619047619 14 3 0 18 3R:9557471-9557533 8 10.5 3560 FBgn0037709 100.1133333 7.073333333 10.93 0.104881135 1.484448633 0.960658737 -6 -6 -6 0.15 dme-miR-965-3p 7mer-m8 TACGCTT 3R 9575015 9575021 - 3R_9575015_9575021_- 0.620166569 0.620177817 0.620172193 7.92E-06 Kap-alpha3 FBtr0301189|FBtr0082108|FBtr0082106|FBtr0082107 9574962|9574482|9574962|9574482 9575473|9575473|9575473|9575473 3R - 9574972 9575075 3'utr Kap-alpha3 FlyBase G49473.1 AGATTTCAAAAAGAATGTAGACCTATTTGATTTATATGAAATTATTTAAATATTTACGCTTCTGATTTGTAATTGAAATTACATATGTATACATTTCTAACATG 76 9575022 0.990178922 12 76 761 1 1.954242509 0.033333333 0.171052632 0.3 76 0 0 90 3R:9574972-9575075 7 Kap-alpha3 FBtr0082108|FBtr0301189|FBtr0082107|FBtr0082106 9574482|9574962|9574482|9574962 9575473|9575473|9575473|9575473 TACGCTT 7mer-m8 dme-miR-965-3p 3R - 9574992 9575070 3'utr Kap-alpha3 FlyBase G37387.1 TCAAAAAGAATGTAGACCTATTTGATTTATATGAAATTATTTAAATATTTACGCTTCTGATTTGTAATTGAAATTACAT 36 9575022 0.843972863 10 35 331 0.955555556 1.633468456 0.044444444 0.25 0.4 36 2 0 43 3R:9574992-9575070 7 47 3561 FBgn0027338 3256.33 173.6 265.9533333 0.014433427 0.270737327 0.176722733 1 1 1 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 3R 9575200 9575205 - 3R_9575200_9575205_- 0.7453483 0.731638281 0.73849329 0.009694434 Kap-alpha3 FBtr0301189|FBtr0082108|FBtr0082106|FBtr0082107 9574962|9574482|9574962|9574482 9575473|9575473|9575473|9575473 3R - 9575186 9575236 3'utr Kap-alpha3 FlyBase G49475.1 CCGCTGCAGCCGTTTTAGCTTCTCTCAATTCTGTGTTAACAAAATTACAAA 45 9575208 0.750132505 4 41 459 0.92 1.662757832 0.08 0.111111111 0.2 45 4 0 46 3R:9575186-9575236 6 Kap-alpha3 FBtr0082108|FBtr0301189|FBtr0082107|FBtr0082106 9574482|9574962|9574482|9574962 9575473|9575473|9575473|9575473 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 9575185 9575228 3'utr Kap-alpha3 FlyBase G37389.1 GCCGTTTTAGCTTCTCTCAATTCTGTGTTAACAAAATTACAAAA 23 9575208 0.770431835 5 22 235 0.965517241 1.447158031 0.172413793 0.260869565 0.413793103 23 1 0 28 3R:9575185-9575228 6 33 3562 FBgn0027338 3256.33 173.6 265.9533333 0.010134108 0.190092166 0.124081919 3 3 3 0.15 dme-miR-33-5p 7mer-m8 CAATGCA 3R 9586101 9586107 + 3R_9586101_9586107_+ 0.551548643 0.349439241 0.450493942 0.142912927 CG8301 FBtr0082073 9586040 9586648 3R + 9586078 9586129 3'utr CG8301 FlyBase G41488.1 AGCCAAGCACAGTGCAGAAACTGCAATGCATTGGAGCGTAGCTCCCGAAACT 30 9586109 0.898846823 5 30 152 1 1.568201724 0.405405405 0.166666667 0.324324324 30 0 0 37 3R:9586078-9586129 7 CG8301 FBtr0082073 9586040 9586648 CAATGCA 7mer-m8 dme-miR-33-5p 3R + 9586086 9586137 3'utr CG8301 FlyBase G31302.1 ACAGTGCAGAAACTGCAATGCATTGGAGCGTAGCTCCCGAAACTCAAGCTTA 25 9586109 0.90114001 2 24 124 1 1.633468456 0.465116279 0.48 0.697674419 25 0 0 43 3R:9586086-9586137 7 27 3563 FBgn0037717 95.66666667 3.806666667 5.923333333 0.282229965 7.092819615 4.558244232 -8 -8 -8 0.15 dme-miR-11-3p 7mer-m1 TGTGATG 3R 9589304 9589310 + 3R_9589304_9589310_+ 0.61204925 0.61207109 0.61206017 1.54E-05 P58IPK FBtr0082074 9589281 9589581 3R + 9589238 9589339 stop_codon P58IPK FlyBase G41500.1 TTCCAACACGGGTCGCCGTTCCAGTTCAAGTTCCACTTCAATTAGTCAGCCAGCAGCCATTTGCTTTGTGATGTCCTAGCCGCGATCCCCGATATCCTTTAA 31 9589303 0.984221303 14 29 226 0.942857143 1.51851394 0.114285714 0.129032258 0.228571429 31 2 0 33 3R:9589238-9589339 7 P58IPK FBtr0082074 9589281 9589581 TGTGATG 7mer-m1 dme-miR-11-3p 3R + 9589277 9589328 stop_codon P58IPK FlyBase G31308.1 AATTAGTCAGCCAGCAGCCATTTGCTTTGTGATGTCCTAGCCGCGATCCCCG 15 9589303 0.666256852 5 12 99 0.92 1.06069784 0.24 0.466666667 0.68 15 1 1 23 3R:9589277-9589328 7 17.5 3564 FBgn0037718 1190.153333 64.61333333 98.40666667 0.014703988 0.270841931 0.17783348 1 1 1 0.15 dme-miR-980-5p 6mer3-8 GAAAAA 3R 9589517 9589522 - 3R_9589517_9589522_- 0.957989575 0.967775661 0.962882618 0.006919818 bocksbeutel FBtr0100537|FBtr0082105 9589466|9589466 9589729|9589773 3R - 9589479 9589586 3'utr bocksbeutel FlyBase G49488.1 CAACTCAATTTGCCAAGTCTTTAATTGCTTGTTCTCGCATATTGTTTCTTTTTATACATAATTAGAAAAATGTACTACATTATAATTATTGTATTGTATTAAATAAAC 174 9589516 0.982220096 8 173 1289 0.99537037 2.33243846 0.041666667 0.224137931 0.375 174 1 0 215 3R:9589479-9589586 6 bocksbeutel FBtr0100537|FBtr0082105 9589466|9589466 9589729|9589773 GAAAAA 6mer3-8 dme-miR-980-5p 3R - 9589494 9589572 3'utr bocksbeutel FlyBase G37406.1 AAGTCTTTAATTGCTTGTTCTCGCATATTGTTTCTTTTTATACATAATTAGAAAAATGTACTACATTATAATTATTGTA 117 9589516 0.901874706 8 114 824 0.994117647 2.227886705 0.047058824 0.35042735 0.552941176 117 1 0 169 3R:9589494-9589572 6 138 3565 FBgn0037719 379.4166667 31.98333333 49.09 0.363716231 4.314747264 2.81116317 -6 -6 -6 0.15 dme-miR-986-5p 6mer3-8 ATTCGA 3R 9633826 9633831 - 3R_9633826_9633831_- 0.999998578 0.936740117 0.968369347 0.044730514 Scm FBtr0082102|FBtr0306008 9633357|9633659 9634337|9634337 3R - 9633780 9633863 3'utr Scm FlyBase G49505.1 ATGTGAAATAGTTCTCAATTGGACACAAAATGATTCGACTTTTTCGAAAACTGGAGCTCGGCTACCAAAATCGCAATGCACATA 27 9633822 0.975357758 13 25 176 0.945945946 1.544068044 0.459459459 0.222222222 0.432432432 27 2 0 35 3R:9633780-9633863 6 Scm FBtr0082102|FBtr0306008 9633357|9633659 9634337|9634337 ATTCGA 6mer3-8 dme-miR-986-5p 3R - 9633799 9633863 3'utr Scm FlyBase G37428.1 ATGTGAAATAGTTCTCAATTGGACACAAAATGATTCGACTTTTTCGAAAACTGGAGCTCGGCTAC 17 9633821 0.671716618 12 17 111 1 1.397940009 0.16 0.294117647 0.52 17 0 0 25 3R:9633799-9633863 6 8.5 3566 FBgn0003334 1178.256667 35.08 53.90333333 0.007214048 0.242303307 0.157689691 -9 -10 -9.5 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 3R 9634290 9634295 - 3R_9634290_9634295_- 0.672069259 0.538501937 0.605285598 0.094446414 Scm FBtr0082102|FBtr0306008 9633357|9633659 9634337|9634337 3R - 9634210 9634324 3'utr Scm FlyBase G49507.1 AAGTTTCAGGCAGCGGACTCGGTTCGGGTTTGACTTATATAGAAATTGTTAACAAATTAGTACCTCCCTTTAACGTAAAGCAAAGCAAACATGAACGATATTCATAGATGTGTTA 30 9634295 0.98122841 12 27 195 0.909090909 1.477121255 0.181818182 0.1 0.181818182 30 3 0 30 3R:9634210-9634324 6 Scm FBtr0082102|FBtr0306008 9633357|9633659 9634337|9634337 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 9634244 9634317 3'utr Scm FlyBase G37430.1 AGGCAGCGGACTCGGTTCGGGTTTGACTTATATAGAAATTGTTAACAAATTAGTACCTCCCTTTAACGTAAAGC 14 9634295 0.98226369 6 11 86 0.9 1.255272505 0.4 0.428571429 0.6 14 2 0 18 3R:9634244-9634317 6 11 3567 FBgn0003334 1178.256667 35.08 53.90333333 0.009335827 0.313568985 0.204069012 0 0 0 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 3R 9684472 9684478 - 3R_9684472_9684478_- 0.777732917 0.772530311 0.775131614 0.003678794 eca FBtr0082098 9684467 9684666 3R - 9684467 9684492 3'utr eca FlyBase G49522.1 TAATAAAATCCATTGTACAAAACGAG 25 9684480 0.623698592 3 25 87 1 1.591064607 0 0.44 0.641025641 25 0 0 39 3R:9684467-9684492 7 eca FBtr0082098 9684467 9684666 GTACAAA 7mer-A1 dme-miR-305-5p 3R - 9684468 9684498 3'utr eca FlyBase G37441.1 GTAATTTAATAAAATCCATTGTACAAAACGA 20 9684480 0.699485405 2 19 77 1 1.462397998 0.034482759 0.4 0.586206897 20 0 0 29 3R:9684468-9684498 7 22 3568 FBgn0069242 341.4133333 44.61 67.42 0.064438022 0.493162968 0.326312667 2 2 2 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 3R 9684601 9684606 - 3R_9684601_9684606_- 0.999262426 0.999990372 0.999626399 0.000514774 eca FBtr0082098 9684467 9684666 3R - 9684503 9684635 3'utr eca FlyBase G49523.1 ACTGGCCAACCACTGGCCTCATTGTTCCGTGTGTTTCCCTCATTTGGCAGGAATTGCGAATTTCATCGATGGATCGTCATCCACCCAACCAGCCACTGGCCTCGACTCCAAGCACTTCTAGTTGTAATTTCTT 64 9684612 0.882363629 22 60 474 0.902777778 1.812913357 0.111111111 0.125 0.222222222 64 7 0 65 3R:9684503-9684635 6 eca FBtr0082098 9684467 9684666 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 9684581 9684633 3'utr eca FlyBase G37442.1 TGGCCAACCACTGGCCTCATTGTTCCGTGTGTTTCCCTCATTTGGCAGGAATT 21 9684611 0.777805302 9 20 178 0.966666667 1.462397998 0.166666667 0.380952381 0.566666667 21 1 0 29 3R:9684581-9684633 6 27.5 3569 FBgn0069242 341.4133333 44.61 67.42 0.080547528 0.61645371 0.407890834 6 5 5.5 0.15 dme-miR-92b-3p 8mer-A1 GTGCAATA 3R 9686731 9686738 + 3R_9686731_9686738_+ 0.625543186 0.624237707 0.624890447 0.000923128 CG18542 FBtr0082084 9686716 9687141 3R + 9686685 9686757 stop_codon CG18542 FlyBase G41532.1 ACCGACGGAGCAGCTTTGCACAAGCAAAACTAGTGCGTTACCAATGGTGCAATATAGATGATAGATAAATGGA 47 9686729 0.978039317 6 46 295 0.981132075 1.716003344 0.094339623 0.127659574 0.226415094 47 1 0 52 3R:9686685-9686757 8 CG18542 FBtr0082084 9686716 9687141 GTGCAATA 8mer-A1 dme-miR-92b-3p 3R + 9686716 9686771 stop_codon CG18542 FlyBase G31333.1 AGTGCGTTACCAATGGTGCAATATAGATGATAGATAAATGGATTCTGTGGAATCTT 16 9686729 0.976444182 2 16 112 1 1.447158031 0.178571429 0.4375 0.678571429 16 0 0 28 3R:9686716-9686771 8 29 3570 FBgn0037731 342.2866667 33.38666667 51.05666667 0.084724305 0.868610224 0.567996344 2 2 2 0.15 dme-miR-190-5p 6mer3-8 ACATAT 3R 9686816 9686821 + 3R_9686816_9686821_+ 0.999988243 0.999650404 0.999819323 0.000238861 CG18542 FBtr0082084 9686716 9687141 3R + 9686779 9686850 3'utr CG18542 FlyBase G41533.1 ATTTACGTATTTATTCTGTGAACTTTACATTCCAGTCACATATTGCGTCCCGAACTCAAATCACACCGAATT 84 9686808 0.797150919 13 82 510 0.981981982 1.736396502 0 0.238095238 0.423423423 84 1 1 109 3R:9686779-9686850 6 CG18542 FBtr0082084 9686716 9687141 ACATAT 6mer3-8 dme-miR-190-5p 3R + 9686784 9686842 3'utr CG18542 FlyBase G31334.1 CGTATTTATTCTGTGAACTTTACATTCCAGTCACATATTGCGTCCCGAACTCAAATCAC 54 9686808 0.76140962 8 51 343 0.974358974 1.880813592 0 0.333333333 0.538461538 54 2 0 76 3R:9686784-9686842 6 63.5 3571 FBgn0037731 342.2866667 33.38666667 51.05666667 0.185517013 1.901956869 1.243716132 8 8 8 0.15 dme-miR-184-3p 6mer3-8 TCCGTC 3R 9686987 9686992 + 3R_9686987_9686992_+ 0.850785881 0.863498735 0.857142308 0.008989307 CG18542 FBtr0082084 9686716 9687141 3R + 9686961 9687025 3'utr CG18542 FlyBase G41534.1 CGTTGTCGGCTCGACAAAGAGTAAATTCCGTCTAGGATTAAGAAGAAACTTTATAATCTCCACAC 15 9686986 0.97442006 3 15 90 1 1.278753601 0 0.266666667 0.421052632 15 0 0 19 3R:9686961-9687025 6 CG18542 FBtr0082084 9686716 9687141 TCCGTC 6mer3-8 dme-miR-184-3p 3R + 9686950 9687024 3'utr CG18542 FlyBase G31335.1 CAGACTTTAGCCGTTGTCGGCTCGACAAAGAGTAAATTCCGTCTAGGATTAAGAAGAAACTTTATAATCTCCACA 7 9686986 0.968589718 4 7 43 1 1.041392685 0 0.428571429 0.636363636 7 0 0 11 3R:9686950-9687024 6 9 3572 FBgn0037731 342.2866667 33.38666667 51.05666667 0.02629375 0.26956869 0.176274727 1 1 1 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 9687219 9687224 - 3R_9687219_9687224_- 0.974859218 0.943280912 0.959070065 0.02232923 Unc-115b FBtr0082097|FBtr0082095 9687058|9687058 9687461|9687461 3R - 9687202 9687235 3'utr Unc-115b FlyBase G49530.1 AAGAAATTAATGTACCTACAGCAGAATCACACAG 15 9687225 0.66700242 2 15 64 1 1.255272505 0.222222222 0.2 0.333333333 15 0 0 18 3R:9687202-9687235 6 Unc-115b FBtr0082095|FBtr0082097 9687058|9687058 9687461|9687461 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 9687207 9687235 3'utr Unc-115b FlyBase G37449.1 AAGAAATTAATGTACCTACAGCAGAATCA 14 9687225 0.854491423 2 14 57 1 1.230448921 0.058823529 0.214285714 0.352941176 14 0 0 17 3R:9687207-9687235 6 14.5 3573 FBgn0260463 1798.356667 71.09 107.6 0.008062917 0.203966803 0.134758364 1 1 1 0.15 dme-miR-190-5p 6mer3-8 ACATAT 3R 9694136 9694141 + 3R_9694136_9694141_+ 0.999996691 0.999998636 0.999997663 1.34E-06 CG32939 FBtr0082085 9694036 9694461 3R + 9694100 9694204 3'utr CG32939 FlyBase G41538.1 TTTACGTATTTATTCTGTGAACTTTACATTCCAGTCACATATTGCGTCCCGAACTCAAATCACACCGAATTATGCCCTTGATGGCGTTTCTTTATCGATTCGACA 87 9694128 0.979524128 7 78 548 0.887850467 1.977723605 0 0.172413793 0.327102804 87 12 0 95 3R:9694100-9694204 6 CG32939 FBtr0082085 9694036 9694461 ACATAT 6mer3-8 dme-miR-190-5p 3R + 9694114 9694159 3'utr CG32939 FlyBase G31337.1 CTGTGAACTTTACATTCCAGTCACATATTGCGTCCCGAACTCAAAT 64 9694128 0.731084878 6 54 370 0.901098901 1.612783857 0 0.3125 0.516483516 64 8 1 82 3R:9694114-9694159 6 71.5 3574 FBgn0052939 2.536666667 0.266666667 0.413333333 28.18659658 268.125 172.983871 8 8 8 0.15 dme-miR-184-3p 6mer3-8 TCCGTC 3R 9694307 9694312 + 3R_9694307_9694312_+ 0.849367453 0.853056392 0.851211922 0.002608446 CG32939 FBtr0082085 9694036 9694461 3R + 9694264 9694343 3'utr CG32939 FlyBase G41539.1 TGTCGACAGACTTTAGCCGTTGTCGGCTCGACAAAGAGTAAATTCCGTCTAGGATTAAGAAGAAACTTTATAATCTCCAC 27 9694306 0.97581612 5 27 170 1 1.544068044 0.057142857 0.222222222 0.4 27 0 0 35 3R:9694264-9694343 6 CG32939 FBtr0082085 9694036 9694461 TCCGTC 6mer3-8 dme-miR-184-3p 3R + 9694263 9694344 3'utr CG32939 FlyBase G31338.1 ATGTCGACAGACTTTAGCCGTTGTCGGCTCGACAAAGAGTAAATTCCGTCTAGGATTAAGAAGAAACTTTATAATCTCCACA 12 9694306 0.972582411 4 12 72 1 1.204119983 0 0.333333333 0.5 12 0 0 16 3R:9694263-9694344 6 14 3575 FBgn0052939 2.536666667 0.266666667 0.413333333 5.519053876 52.5 33.87096774 1 1 1 0.15 dme-miR-184-5p 8mer-m1 TGATAAGG 3R 9714167 9714174 + 3R_9714167_9714174_+ 0.614599344 0.611672298 0.613135821 0.002069702 dmt FBtr0082086 9714126 9714675 3R + 9714155 9714186 3'utr dmt FlyBase G41554.1 TTTTTGTGTCGCTGATAAGGGGAAGTAGTCGT 5 9714169 0.819876762 3 5 31 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 3R:9714155-9714186 8 dmt FBtr0082086 9714126 9714675 TGATAAGG 8mer-m1 dme-miR-184-5p 3R + 9714156 9714201 3'utr dmt FlyBase G31351.1 TTTTGTGTCGCTGATAAGGGGAAGTAGTCGTTTTTAATTTAATGTG 9 9714180 0.796017454 5 9 71 1 1.113943352 0.307692308 0.333333333 0.538461538 9 0 0 13 3R:9714156-9714201 8 6.5 3576 FBgn0016792 1049.153333 39.87 61.16 0.006195472 0.163029847 0.106278613 -2 -13 -7.5 0.15 dme-miR-1008-3p 6mer2-7 GCTGTG 3R 9742021 9742026 + 3R_9742021_9742026_+ 0.999950161 0.999999743 0.999974952 3.50E-05 Pnn FBtr0082126 9741975 9742156 3R + 9741993 9742051 3'utr Pnn FlyBase G41561.1 GGGCTTGAAATATGATCGTGCGGATATCGCTGTGTAGGGCAATTGGGTTTCAATTTATA 11 9742023 0.980493779 6 10 70 0.933333333 1.146128036 0.266666667 0.272727273 0.466666667 11 1 0 14 3R:9741993-9742051 6 Pnn FBtr0082126 9741975 9742156 GCTGTG 6mer2-7 dme-miR-1008-3p 3R + 9741982 9742040 3'utr Pnn FlyBase G31358.1 AGTTTGCACTAGGGCTTGAAATATGATCGTGCGGATATCGCTGTGTAGGGCAATTGGGT 17 9742027 0.963697146 7 17 94 1 1.397940009 0.2 0.352941176 0.56 17 0 0 25 3R:9741982-9742040 6 9.5 3577 FBgn0037737 459.6666667 41.47666667 63.47666667 0.02066715 0.229044443 0.149661293 -2 -6 -4 0.15 dme-miR-970-3p 6mer2-7 CTTATG 3R 9750490 9750495 + 3R_9750490_9750495_+ 0.947109685 0.999021789 0.973065737 0.036707398 PpD3 FBtr0331693|FBtr0082129|FBtr0082128 9750343|9750343|9750343 9751094|9751094|9751094 3R + 9750398 9750513 3'utr PpD3 FlyBase G41579.1 AATTTACAAACAGCTTGAGAACTTACAATCGCAAGACAGCCCAGCTTACAATGATCAAAGGAGAGGAAAAGGATTCGAAGATGCTCAATAGACTTATGCACACCGCGAGCTGCTTC 128 9750486 0.943557167 12 124 602 0.980519481 1.877946952 0.305194805 0.1796875 0.318181818 128 2 1 151 3R:9750398-9750513 6 PpD3 FBtr0331693|FBtr0082129|FBtr0082128 9750343|9750343|9750343 9751094|9751094|9751094 CTTATG 6mer2-7 dme-miR-970-3p 3R + 9750430 9750564 3'utr PpD3 FlyBase G31373.1 AAGACAGCCCAGCTTACAATGATCAAAGGAGAGGAAAAGGATTCGAAGATGCTCAATAGACTTATGCACACCGCGAGCTGCTTCACTACTTAAGTACGAGTATGGCGAGTCCATAAGGCGTAGGACGAGTGGAGG 82 9750486 0.947402246 15 77 348 0.927927928 1.711807229 0.396396396 0.292682927 0.477477477 82 7 1 103 3R:9750430-9750564 6 65.5 3578 FBgn0005777 1338.646667 67.42 103.0166667 0.048930014 0.971521804 0.635819447 4 4 4 0.15 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3R 9754786 9754792 - 3R_9754786_9754792_- 0.616199358 0.615333304 0.615766331 0.000612425 Rpt3R FBtr0332172|FBtr0301536 9754733|9754733 9754897|9754897 3R - 9754770 9754813 3'utr Rpt3R FlyBase G49636.1 TCGAAATATATTAGTCAATACTGGTGCTTTAAATAAAAGAAAAT 11 9754785 0.850362932 4 11 87 1 1.079181246 0 0.090909091 0.166666667 11 0 0 12 3R:9754770-9754813 7 Rpt3R FBtr0301536|FBtr0332172 9754733|9754733 9754897|9754897 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3R - 9754771 9754802 3'utr Rpt3R FlyBase G37533.1 TAGTCAATACTGGTGCTTTAAATAAAAGAAAA 11 9754785 0.70010988 4 11 78 1 1.230448921 0.117647059 0.454545455 0.647058824 11 0 0 17 3R:9754771-9754802 7 11 3579 FBgn0037742 43.66666667 3.773333333 5.77 0.251908397 2.915194346 1.906412478 -7 -7 -7 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 3R 9761834 9761840 - 3R_9761834_9761840_- 0.782911615 0.782263711 0.782587663 0.000458134 Snap24 FBtr0082163 9761303 9762210 3R - 9761810 9761858 3'utr Snap24 FlyBase G49643.1 TACTATTACTACACTCGTGTACAAATGGCAACCAGATGGCGCCGGAAAC 26 9761833 0.948163519 6 23 100 0.918918919 1.230448921 0 0.32 0.540540541 25 2 1 34 3R:9761810-9761858 7 Snap24 FBtr0082163 9761303 9762210 GTACAAA 7mer-A1 dme-miR-305-5p 3R - 9761811 9761852 3'utr Snap24 FlyBase G37539.1 TACTACACTCGTGTACAAATGGCAACCAGATGGCGCCGGAAA 19 9761833 0.931244553 4 17 69 0.793103448 1.361727836 0 0.315789474 0.551724138 19 6 0 23 3R:9761811-9761852 7 20.5 3580 FBgn0266720 491.6633333 32.04666667 48.65666667 0.041695198 0.639692116 0.421319449 -7 -7 -7 0.15 dme-miR-1008-3p 7mer-m8 AGCTGTG 3R 9765892 9765898 + 3R_9765892_9765898_+ 0.652016161 0.666820616 0.659418388 0.010468292 CG8478 FBtr0301870|FBtr0301871|FBtr0332171|FBtr0082133 9765837|9765837|9765837|9765837 9766135|9766135|9766135|9766135 3R + 9765843 9765916 3'utr CG8478 FlyBase G41599.1 AGCGATTCGTGTGTAGCCTAGTCTATGTCTAAGTTAAGTGCTGTGGCGTAGCTGTGGTCCGGTAACGGCGCGTT 15 9765884 0.928174759 9 11 112 0.611111111 0.740362689 0.222222222 0.133333333 0.277777778 15 6 1 11 3R:9765843-9765916 7 CG8478 FBtr0332171|FBtr0082133|FBtr0301870|FBtr0301871 9765837|9765837|9765837|9765837 9766135|9766135|9766135|9766135 AGCTGTG 7mer-m8 dme-miR-1008-3p 3R + 9765873 9765912 3'utr CG8478 FlyBase G31382.1 AAGTTAAGTGCTGTGGCGTAGCTGTGGTCCGGTAACGGCG 9 9765885 0.581625969 6 9 60 1 1.146128036 0.285714286 0.444444444 0.642857143 9 0 0 14 3R:9765873-9765912 7 8.5 3581 FBgn0037746 785.14 44.18333333 67.65666667 0.010826095 0.192380234 0.12563433 8 7 7.5 0.15 dme-miR-1006-3p 6mer2-7 GAATTT 3R 9766043 9766048 + 3R_9766043_9766048_+ 1 1 1 0 CG8478 FBtr0301870|FBtr0301871|FBtr0332171|FBtr0082133 9765837|9765837|9765837|9765837 9766135|9766135|9766135|9766135 3R + 9766007 9766075 3'utr CG8478 FlyBase G41600.1 ATTGTACACTTCAGCTGCACGACTGGACTGCTTTGTGAATTTTTTAGGTTTTCGTATGACATTCACACA 25 9766046 0.790926277 10 24 204 0.962962963 1.414973348 0.111111111 0.08 0.148148148 25 1 0 26 3R:9766007-9766075 6 CG8478 FBtr0332171|FBtr0082133|FBtr0301870|FBtr0301871 9765837|9765837|9765837|9765837 9766135|9766135|9766135|9766135 GAATTT 6mer2-7 dme-miR-1006-3p 3R + 9765987 9766062 3'utr CG8478 FlyBase G31383.1 GGTTACTCGAATGCTTATTAATTGTACACTTCAGCTGCACGACTGGACTGCTTTGTGAATTTTTTAGGTTTTCGTA 16 9766038 0.98730842 8 15 143 1 1.380211242 0.208333333 0.375 0.583333333 16 0 0 24 3R:9765987-9766062 6 11 3582 FBgn0037746 785.14 44.18333333 67.65666667 0.01401024 0.248962656 0.162585604 -3 5 1 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 9766376 9766382 - 3R_9766376_9766382_- 0.658945022 0.658946496 0.658945759 1.06E-06 MED6 FBtr0301873|FBtr0339719|FBtr0082161|FBtr0082162|FBtr0301872 9766029|9766029|9766029|9766029|9766029 9766440|9766440|9766440|9766440|9766440 3R - 9766349 9766399 3'utr MED6 FlyBase G49653.1 ATTAGTCCGAGTCCTTTGGCAGCTGCATAAAAGGCGCTGAATGCTGCCTGC 41 9766383 0.974589705 4 40 246 0.97826087 1.653212514 0.239130435 0.12195122 0.217391304 41 1 0 45 3R:9766349-9766399 7 MED6 FBtr0339719|FBtr0082161|FBtr0082162|FBtr0301872|FBtr0301873 9766029|9766029|9766029|9766029|9766029 9766440|9766440|9766440|9766440|9766440 GGCAGCT 7mer-m8 dme-miR-980-3p 3R - 9766345 9766399 3'utr MED6 FlyBase G37544.1 ATTAGTCCGAGTCCTTTGGCAGCTGCATAAAAGGCGCTGAATGCTGCCTGCATTT 37 9766384 0.972933767 5 36 218 0.981132075 1.716003344 0.188679245 0.324324324 0.528301887 37 1 0 52 3R:9766345-9766399 7 38 3583 FBgn0024330 320.2133333 23.55 36.04333333 0.118670886 1.61358811 1.054286507 1 2 1.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3R 9769498 9769504 + 3R_9769498_9769504_+ 0.823073283 0.823346255 0.823209769 0.00019304 CG8481 FBtr0100583|FBtr0082134 9769425|9769425 9770027|9770027 3R + 9769431 9769619 3'utr CG8481 FlyBase G41603.1 CAACGCCAGTAGTAGTGGGCTTGGCTAAATTGGGCCATACCCAGCCCGATCAGAGAGTGGCAGTGAACTAGTCAAATTGGCAAATGCTTGAAATTCTTTACGGGTTTTACCTGCCAGCAGCTGCTTCGAGCCATAACCTGTGGATGCCAGGCAGTCTGCCAAGTGCATGTGTGATTGCCTCGTTGCTCT 113 9769489 0.964284717 22 102 534 0.929078014 1.8162413 0.120567376 0.203539823 0.361702128 113 9 1 131 3R:9769431-9769619 7 CG8481 FBtr0100583|FBtr0082134 9769425|9769425 9770027|9770027 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 9769429 9769559 3'utr CG8481 FlyBase G31387.1 GTCAACGCCAGTAGTAGTGGGCTTGGCTAAATTGGGCCATACCCAGCCCGATCAGAGAGTGGCAGTGAACTAGTCAAATTGGCAAATGCTTGAAATTCTTTACGGGTTTTACCTGCCAGCAGCTGCTTCGA 113 9769490 0.959591984 13 107 496 0.95212766 2.252853031 0.138297872 0.451327434 0.670212766 113 9 0 179 3R:9769429-9769559 7 93 3584 FBgn0037747 197.4366667 16.77 25.65666667 0.471037126 5.545617174 3.624788879 9 8 8.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 9779385 9779391 + 3R_9779385_9779391_+ 0.751949084 0.744131718 0.748040401 0.005527737 RpS29 FBtr0334681|FBtr0334681|FBtr0334681 9778784|9778784|9778784 9779528|9779528|9779528 3R + 9779349 9779428 3'utr RpS29 FlyBase G41613.1 CACCAGTTGCATAAAGGCTTTTGATGCGGACTTTGATGTGATATGCAAAACTGGCAGGCCACTGAACCCATTTTTTATAT 31 9779369 0.979946844 11 31 217 1 1.544068044 0.257142857 0.129032258 0.228571429 31 0 0 35 3R:9779349-9779428 7 RpS29 FBtr0334681|FBtr0334681|FBtr0334681 9778784|9778784|9778784 9779528|9779528|9779528 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 9779353 9779398 3'utr RpS29 FlyBase G31401.1 AGTTGCATAAAGGCTTTTGATGCGGACTTTGATGTGATATGCAAAA 21 9779382 0.937852622 9 20 150 0.911764706 1.491361694 0.088235294 0.333333333 0.588235294 21 3 0 31 3R:9779353-9779398 7 17 3585 FBgn0261599 23525.90667 6343.63 9678.496667 0.000722608 0.002679854 0.001756471 16 3 9.5 0.15 dme-miR-282-5p 6mer3-8 AGAGGC 3R 9783827 9783832 - 3R_9783827_9783832_- 0.590125527 0.987637746 0.788881637 0.281083572 MtnA FBtr0334686 9783405 9783858 3R - 9783774 9783861 stop_codon MtnA FlyBase G49663.1 TGAGCTTTCCCCCAAAAAAGATCTGGAGTAGAGGCGCTGCATCTTGTCTCTCTACACACCCTGCAATAAATGTCCAATTAAAGTAATT 39 9783855 0.723290385 11 35 225 0.875 1.62324929 0.208333333 0.179487179 0.333333333 39 6 0 42 3R:9783774-9783861 6 MtnA FBtr0334686 9783405 9783858 AGAGGC 6mer3-8 dme-miR-282-5p 3R - 9783776 9783885 stop_codon MtnA FlyBase G37551.1 AAATCCGCCTGCGGCTGCTCCGAGTGAGCTTTCCCCCAAAAAAGATCTGGAGTAGAGGCGCTGCATCTTGTCTCTCTACACACCCTGCAATAAATGTCCAATTAAAGTAA 38 9783834 0.919425703 15 37 194 0.979166667 1.672097858 0.1875 0.263157895 0.416666667 38 1 0 47 3R:9783776-9783885 6 21 3586 FBgn0002868 684.99 284.0066667 426.33 0.030657382 0.073941926 0.049257617 23 2 12.5 0.15 dme-miR-12-5p 7mer-m8 AATACTC 3R 9786958 9786964 + 3R_9786958_9786964_+ 0.669088615 0.395575002 0.532331809 0.193403321 CG8500 FBtr0082139 9786856 9789323 3R + 9786921 9786982 3'utr CG8500 FlyBase G41618.1 GTCGAGCTGAAGTGAACGGAGACGACGGTGACAGACAAATACTCGCCTTGGGGCAGCACCCT 17 9786960 0.910717331 3 17 58 1 1.255272505 0.166666667 0.058823529 0.111111111 17 0 0 18 3R:9786921-9786982 7 CG8500 FBtr0082139 9786856 9789323 AATACTC 7mer-m8 dme-miR-12-5p 3R + 9786942 9786977 3'utr CG8500 FlyBase G31408.1 ACGACGGTGACAGACAAATACTCGCCTTGGGGCAGC 6 9786968 0.612596804 3 6 21 1 0.954242509 0 0.166666667 0.444444444 6 0 0 9 3R:9786942-9786977 7 10.5 3587 FBgn0037754 1099.76 38.82 59.79333333 0.009547538 0.270479134 0.175604861 -2 -10 -6 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3R 9787236 9787242 + 3R_9787236_9787242_+ 0.661431187 0.661399137 0.661415162 2.27E-05 CG8500 FBtr0082139 9786856 9789323 3R + 9787207 9787272 3'utr CG8500 FlyBase G41620.1 ATATATTCTATTCGAGCCGATCAGATCTTTCTAGTCGCACAGAGACACGATACCACGTACTGCATA 187 9787235 0.756873768 10 185 1090 0.990950226 2.340444115 0.366515837 0.14973262 0.280542986 187 2 0 219 3R:9787207-9787272 7 CG8500 FBtr0082139 9786856 9789323 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 9787202 9787269 3'utr CG8500 FlyBase G31410.1 AGGTTATATATTCTATTCGAGCCGATCAGATCTTTCTAGTCGCACAGAGACACGATACCACGTACTGC 126 9787235 0.677542435 6 118 728 0.91959799 1.961421094 0.361809045 0.388888889 0.613065327 126 15 1 183 3R:9787202-9787269 7 147 3588 FBgn0037754 1099.76 38.82 59.79333333 0.133665527 3.786707883 2.458468057 1 1 1 0.15 dme-miR-14-3p 6mer3-8 AAGACT 3R 9787549 9787554 + 3R_9787549_9787554_+ 0.89554572 0.980922704 0.938234212 0.060370656 CG8500 FBtr0082139 9786856 9789323 3R + 9787527 9787589 3'utr CG8500 FlyBase G41622.1 ATTTACATGGATCCATCAACGTAAGACTTCTCCGTGATCGCCACATAGAGAGCATCGCGAGGC 7 9787548 0.988960898 3 6 50 0.857142857 0.77815125 0.428571429 0 0 7 1 0 6 3R:9787527-9787589 6 CG8500 FBtr0082139 9786856 9789323 AAGACT 6mer3-8 dme-miR-14-3p 3R + 9787441 9787577 3'utr CG8500 FlyBase G31413.1 AAGCTATACACTAATATCTCTAATGAAAGCCAAAGTACCTACTTAAAGACATAGAATCTGTATCTACTACGATATGATAACAAAATATTTACATGGATCCATCAACGTAAGACTTCTCCGTGATCGCCACATAGAGA 22 9787548 0.970762601 14 20 123 0.970588235 1.51851394 0.147058824 0.363636364 0.588235294 22 1 0 33 3R:9787441-9787577 6 7 3589 FBgn0037754 1099.76 38.82 59.79333333 0.006365025 0.180319423 0.117069907 1 1 1 0.15 dme-miR-980-3p 6mer2-7 GCAGCT 3R 9787871 9787876 + 3R_9787871_9787876_+ 0.999999864 0.999808843 0.999904353 0.000135128 CG8500 FBtr0082139 9786856 9789323 3R + 9787827 9787905 3'utr CG8500 FlyBase G41624.1 AATATGTATGTACAATTTTACACTTATTTGCTGAACTTTATTGAGCAGCTTGAACTTTCTCAGTAGTAGCCAGATCGAT 15 9787867 0.98823545 8 14 120 0.882352941 1.176091259 0.235294118 0.133333333 0.235294118 15 2 0 15 3R:9787827-9787905 6 CG8500 FBtr0082139 9786856 9789323 GCAGCT 6mer2-7 dme-miR-980-3p 3R + 9787852 9787882 3'utr CG8500 FlyBase G31415.1 ATTTGCTGAACTTTATTGAGCAGCTTGAACT 8 9787867 0.770603678 4 8 60 1 1.079181246 0 0.375 0.583333333 8 0 0 12 3R:9787852-9787882 6 9.5 3590 FBgn0037754 1099.76 38.82 59.79333333 0.008638248 0.244719217 0.158880589 4 4 4 0.15 dme-miR-283-5p 8mer-A1 TGATATTA 3R 9788236 9788243 + 3R_9788236_9788243_+ 0.592192105 0.592175262 0.592183683 1.19E-05 CG8500 FBtr0082139 9786856 9789323 3R + 9788207 9788337 3'utr CG8500 FlyBase G41626.1 CAAATTGTTTCGCATAGTTTGCTGTTGTTTGATATTAAGAGGATAAGTTTTTTTAAATTTTACCAATCGGACTAAGTGAATGATATGCTTTAAACGCTGCTATACCAATTAGCCAAATAGAGGGGCATGTA 19 9788234 0.991101359 15 19 193 1 1.322219295 0.380952381 0.105263158 0.19047619 19 0 0 21 3R:9788207-9788337 8 CG8500 FBtr0082139 9786856 9789323 TGATATTA 8mer-A1 dme-miR-283-5p 3R + 9788216 9788248 3'utr CG8500 FlyBase G31416.1 TCGCATAGTTTGCTGTTGTTTGATATTAAGAGG 7 9788234 0.637901778 5 7 69 1 0.954242509 0.555555556 0.285714286 0.444444444 7 0 0 9 3R:9788216-9788248 8 9 3591 FBgn0037754 1099.76 38.82 59.79333333 0.008183604 0.231839258 0.150518452 2 2 2 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 9788637 9788642 + 3R_9788637_9788642_+ 0.999999908 0.924870224 0.962435066 0.05312472 CG8500 FBtr0082139 9786856 9789323 3R + 9788609 9788675 3'utr CG8500 FlyBase G41627.1 CGACGATATGCCAGCCTTAGTTGAGAATTCTAGTTAGCCTGCCTGTGCTTTGGGTTCTGCTTGGTGT 11 9788642 0.98925045 7 10 91 1 1.041392685 0.363636364 0 0 11 0 0 11 3R:9788609-9788675 6 CG8500 FBtr0082139 9786856 9789323 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 9788603 9788669 3'utr CG8500 FlyBase G31419.1 CGATTACGACGATATGCCAGCCTTAGTTGAGAATTCTAGTTAGCCTGCCTGTGCTTTGGGTTCTGCT 10 9788658 0.985720566 7 10 82 1 1.230448921 0.352941176 0.5 0.705882353 10 0 0 17 3R:9788603-9788669 6 6.5 3592 FBgn0037754 1099.76 38.82 59.79333333 0.00591038 0.167439464 0.108707771 -5 -21 -13 0.15 dme-miR-1003-3p 6mer2-7 TGTGAG 3R 9789053 9789058 - 3R_9789053_9789058_- 0.996698042 0.979524395 0.988111219 0.012143569 CG12945 FBtr0113214|FBtr0334685 9788850|9788850 9789429|9789429 3R - 9788984 9789150 3'utr CG12945 FlyBase G49668.1 AATTTTTATATGTAACTTGTTGATCATTTATATTTACAACTTGGCGCTCAGGCGATTATTAATAATAATATTATTAGCAGTGGGCGCTCATTTGTGAGTTGCGTATTAATTGAATGTAAGCGATAATTAAATATTCGGTTTTCGAATCTTGTAAAATCTAATTTAAT 26 9789052 0.987303378 13 26 236 1 1.447158031 0.392857143 0.076923077 0.142857143 26 0 0 28 3R:9788984-9789150 6 CG12945 FBtr0334685|FBtr0113214 9788850|9788850 9789429|9789429 TGTGAG 6mer2-7 dme-miR-1003-3p 3R - 9789023 9789076 3'utr CG12945 FlyBase G37554.1 TAGCAGTGGGCGCTCATTTGTGAGTTGCGTATTAATTGAATGTAAGCGATAATT 10 9789052 0.912623744 5 10 78 1 1.146128036 0.5 0.4 0.571428571 10 0 0 14 3R:9789023-9789076 6 12 3593 FBgn0037755 425.2633333 24.99 38.05666667 0.02821781 0.480192077 0.315319261 -6 -6 -6 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 9789276 9789283 - 3R_9789276_9789283_- 0.500114301 0.500087915 0.500101108 1.87E-05 CG12945 FBtr0113214|FBtr0334685 9788850|9788850 9789429|9789429 3R - 9789239 9789309 3'utr CG12945 FlyBase G49669.1 AAATTTTTATTTAAATTATTTTGCATGTACTTAATCTCATTTGCGCGATAAGTGTTATTAAGATAAATCTT 133 9789284 0.743506749 15 127 1299 0.968152866 2.181843588 0.038216561 0.135338346 0.267515924 133 5 0 152 3R:9789239-9789309 8 CG12945 FBtr0334685|FBtr0113214 9788850|9788850 9789429|9789429 GTACTTAA 8mer-A1 dme-miR-252-5p 3R - 9789241 9789307 3'utr CG12945 FlyBase G37556.2 ATTTTTATTTAAATTATTTTGCATGTACTTAATCTCATTTGCGCGATAAGTGTTATTAAGATAAATC 85 9789284 0.738066613 12 82 763 0.9609375 1.788875116 0.09375 0.364705882 0.578125 85 4 1 123 3R:9789241-9789307 8 100 3594 FBgn0037755 425.2633333 24.99 38.05666667 0.235148418 4.00160064 2.627660506 1 1 1 0.15 dme-miR-305-5p 7mer-A1 GTACAAA 3R 9797271 9797277 + 3R_9797271_9797277_+ 0.779095917 0.777889606 0.778492761 0.000852983 CG8516 FBtr0082141 9797002 9797754 3R + 9797239 9797339 3'utr CG8516 FlyBase G41640.1 TAGAATATAGCATAGCTTTAGGTTGAATTTGTGTACAAACTATTTGTATGAACGGCTCGACAATTGCTTCCGGGCGAGGGTGGGTAATCGCTCCAAGTATC 72 9797267 0.783196837 10 69 642 0.989010989 1.954242509 0.197802198 0.236111111 0.395604396 72 1 0 90 3R:9797239-9797339 7 CG8516 FBtr0082141 9797002 9797754 GTACAAA 7mer-A1 dme-miR-305-5p 3R + 9797231 9797326 3'utr CG8516 FlyBase G31430.1 TTGCCCTTTAGAATATAGCATAGCTTTAGGTTGAATTTGTGTACAAACTATTTGTATGAACGGCTCGACAATTGCTTCCGGGCGAGGGTGGGTAAT 45 9797267 0.794954015 9 40 361 0.942028986 1.812913357 0.202898551 0.4 0.608695652 45 4 0 65 3R:9797231-9797326 7 42 3595 FBgn0037757 595.6666667 20.49666667 31.43 0.070509233 2.049113677 1.336302895 4 4 4 0.15 dme-miR-318-3p 6mer2-7 CCAGTG 3R 9797369 9797374 + 3R_9797369_9797374_+ 0.990720564 0.999224458 0.994972511 0.006013165 CG8516 FBtr0082141 9797002 9797754 3R + 9797350 9797407 3'utr CG8516 FlyBase G41641.1 TTATTATTCTATCTCAGTACCAGTGCGTCCTATTTTAGGTAAATTAAAGGCAGGGGTC 16 9797380 0.980407145 7 15 122 1 1.278753601 0.157894737 0.125 0.263157895 16 0 0 19 3R:9797350-9797407 6 CG8516 FBtr0082141 9797002 9797754 CCAGTG 6mer2-7 dme-miR-318-3p 3R + 9797359 9797391 3'utr CG8516 FlyBase G31431.1 TATCTCAGTACCAGTGCGTCCTATTTTAGGTAA 6 9797381 0.622931107 3 4 51 0.461538462 0.77815125 0 0.5 0.769230769 6 7 0 6 3R:9797359-9797391 6 9.5 3596 FBgn0037757 595.6666667 20.49666667 31.43 0.015948517 0.463489998 0.302258988 -11 -12 -11.5 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 3R 9797915 9797921 - 3R_9797915_9797921_- 0.521205048 0.476533463 0.498869255 0.031587521 CG9467 FBtr0082156 9797767 9798459 3R - 9797867 9797963 3'utr CG9467 FlyBase G49680.1 AAACAGCCAATCAGTTGATTGTCAACCTTGAAGATGATTACTTGTGATTAAAATCGATAGAGCGACTGCTTCAAATTCGAATCTGTCCTGTTGCATG 62 9797923 0.762414697 20 60 494 0.961038961 1.568201724 0.051948052 0.209677419 0.363636364 62 2 1 74 3R:9797867-9797963 7 CG9467 FBtr0082156 9797767 9798459 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 9797909 9797962 3'utr CG9467 FlyBase G37561.2 AACAGCCAATCAGTTGATTGTCAACCTTGAAGATGATTACTTGTGATTAAAATC 18 9797926 0.656996925 9 17 130 0.925925926 1.397940009 0.037037037 0.277777778 0.518518519 18 2 0 25 3R:9797909-9797962 7 25.5 3597 FBgn0037758 388.19 14.69 22.38 0.065689482 1.735874745 1.139410188 2 5 3.5 0.15 dme-miR-14-3p 6mer3-8 AAGACT 3R 9798079 9798084 - 3R_9798079_9798084_- 0.999999901 0.999803939 0.99990192 0.000138593 CG9467 FBtr0082156 9797767 9798459 3R - 9797968 9798105 3'utr CG9467 FlyBase G49681.1 AAACCATGTAAACCAGAGTATAAGACTTCTGCAACCGATCATCTATAATTAGCACAACTCTCCTAAAGGGTGCTCCATCAGGACAGATACGAAATCGTTCGGCTTGGATAAGATTGGTTGCCTTAAGCAAAGAAAGTT 120 9798076 0.962533558 12 111 621 0.921428571 1.633468456 0.042857143 0.125 0.25 120 9 2 129 3R:9797968-9798105 6 CG9467 FBtr0082156 9797767 9798459 AAGACT 6mer3-8 dme-miR-14-3p 3R - 9798059 9798104 3'utr CG9467 FlyBase G37563.1 AACCATGTAAACCAGAGTATAAGACTTCTGCAACCGATCATCTATA 70 9798076 0.72754091 5 61 349 0.857142857 1.62324929 0.091836735 0.285714286 0.489795918 70 13 1 84 3R:9798059-9798104 6 89 3598 FBgn0037758 388.19 14.69 22.38 0.229269172 6.058543227 3.976764969 -8 -8 -8 0.15 dme-miR-305-3p 6mer3-8 ATGTGC 3R 9798239 9798244 - 3R_9798239_9798244_- 0.999577662 0.99864416 0.999110911 0.000660084 CG9467 FBtr0082156 9797767 9798459 3R - 9798202 9798300 3'utr CG9467 FlyBase G49683.1 ACTGGGCCGTGATGAACTGCCAGCAGGCATTTACCCAATCAATTAATCTCCATTATATGTGCTCGATGTGTTTGCAAATGCAATGTGTATCCCGTAAAC 25 9798243 0.980188227 11 25 207 1 1.447158031 0.107142857 0.12 0.214285714 25 0 0 28 3R:9798202-9798300 6 CG9467 FBtr0082156 9797767 9798459 ATGTGC 6mer3-8 dme-miR-305-3p 3R - 9798151 9798301 3'utr CG9467 FlyBase G37564.1 CACTGGGCCGTGATGAACTGCCAGCAGGCATTTACCCAATCAATTAATCTCCATTATATGTGCTCGATGTGTTTGCAAATGCAATGTGTATCCCGTAAACCCATTTTTTGTGCTCCTCCAAACTTGGATCGTACAGTTAGTAATTTAAAAA 32 9798243 0.990393691 14 23 224 0.673469388 1.041392685 0.040816327 0.375 0.591836735 32 14 2 33 3R:9798151-9798301 6 14.5 3599 FBgn0037758 388.19 14.69 22.38 0.037352843 0.987066031 0.647899911 -1 -1 -1 0.15 dme-miR-980-3p 6mer3-8 GGCAGC 3R 9804268 9804273 - 3R_9804268_9804273_- 0.894081837 0.938472878 0.916277357 0.031389248 FBXO11 FBtr0334684 9803484 9804888 3R - 9804260 9804338 3'utr FBXO11 FlyBase G49702.1 CCCCCTCCTGACTAACAACAATTCGAAGAAAGCAATTCTAAGTATTAACAACAAACTAGATTAGCGGCAGCCAATGCTT 15 9804302 0.966433388 7 13 69 0.875 0.84509804 0.0625 0.066666667 0.125 15 1 1 14 3R:9804260-9804338 6 FBXO11 FBtr0334684 9803484 9804888 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 9804254 9804315 3'utr FBXO11 FlyBase G37573.1 CGAAGAAAGCAATTCTAAGTATTAACAACAAACTAGATTAGCGGCAGCCAATGCTTCAGCAA 7 9804277 0.978236431 5 5 27 0.833333333 1 0 0.571428571 0.75 7 2 0 10 3R:9804254-9804315 6 6.5 3600 FBgn0037760 1562.243333 36.55333333 56.13333333 0.004160683 0.17782236 0.115795724 29 4 16.5 0.15 dme-miR-33-5p 8mer-A1 CAATGCAA 3R 9804607 9804614 - 3R_9804607_9804614_- 0.631898019 0.63165947 0.631778744 0.000168645 FBXO11 FBtr0334684 9803484 9804888 3R - 9804579 9804638 3'utr FBXO11 FlyBase G49705.1 TAACTGAGTATGTTACGGATAAATCAATGCAAAAACCACTGAAACTTTTCCCATTTATGT 80 9804615 0.791856305 4 78 257 0.980392157 2 0.274509804 0.2375 0.401960784 80 2 0 100 3R:9804579-9804638 8 FBXO11 FBtr0334684 9803484 9804888 CAATGCAA 8mer-A1 dme-miR-33-5p 3R - 9804601 9804633 3'utr FBXO11 FlyBase G37575.1 GAGTATGTTACGGATAAATCAATGCAAAAACCA 57 9804615 0.769030334 2 53 154 0.964285714 1.908485019 0.321428571 0.385964912 0.583333333 57 3 0 81 3R:9804601-9804633 8 66 3601 FBgn0037760 1562.243333 36.55333333 56.13333333 0.04224694 1.805580886 1.175771971 1 1 1 0.15 dme-miR-980-3p 8mer-A1 GGCAGCTA 3R 9804869 9804876 - 3R_9804869_9804876_- 0.660776399 0.668698134 0.664737267 0.005601488 FBXO11 FBtr0334684 9803484 9804888 3R - 9804788 9804910 stop_codon FBXO11 FlyBase G49707.1 ACACACACTGATGGTCAACTAGAGAACCCCCAACGGCAGCTAATCCACTATAGATATATCTTAAGTCGTTAAGGCCAATCTCTCAAATCTCTCGCACATCTCACGCGTTGCTGTAAATATTCA 43 9804868 0.768361185 17 38 185 0.901960784 1.361727836 0.215686275 0.162790698 0.294117647 43 4 1 46 3R:9804788-9804910 8 FBXO11 FBtr0334684 9803484 9804888 GGCAGCTA 8mer-A1 dme-miR-980-3p 3R - 9804788 9805011 stop_codon FBXO11 FlyBase G37577.1 TGCGACTGCGGTGCTGGCACCCTGTCCAATCAGTGTCAACTGCAGGGCGAACCCACTCAGGACACGGACACACTCTACGACTCGGCAGCCCCCATGGAATCACACACACTGATGGTCAACTAGAGAACCCCCAACGGCAGCTAATCCACTATAGATATATCTTAAGTCGTTAAGGCCAATCTCTCAAATCTCTCGCACATCTCACGCGTTGCTGTAAATATTCA 37 9804867 0.957714453 19 30 146 0.771929825 1.643452676 0.298245614 0.459459459 0.649122807 37 13 0 44 3R:9804788-9805011 8 18 3602 FBgn0037760 1562.243333 36.55333333 56.13333333 0.011521893 0.492431151 0.320665083 -8 -9 -8.5 0.15 dme-miR-283-5p 7mer-m1 GATATTT 3R 9983484 9983490 - 3R_9983484_9983490_- 0.739970356 0.53857726 0.639273808 0.142406427 Art4 FBtr0082150|FBtr0333687 9983184|9982814 9983912|9983912 3R - 9983395 9983507 3'utr Art4 FlyBase G49732.1 ATGTGAATTGTAATACCGATATTTAGCCCGCACGGGACTGCGCTTCAGGAAGTTTATTAGTTAATATGCCGATTGCCAATTGCAGATTTTGCCGTAAGCTTTGAACAAACCAA 14 9983497 0.981348367 10 12 88 0.894736842 1.230448921 0.210526316 0.285714286 0.473684211 14 2 0 17 3R:9983395-9983507 7 Art4 FBtr0082150|FBtr0333687 9983184|9982814 9983912|9983912 GATATTT 7mer-m1 dme-miR-283-5p 3R - 9983454 9983513 3'utr Art4 FlyBase G37592.1 TAACGTATGTGAATTGTAATACCGATATTTAGCCCGCACGGGACTGCGCTTCAGGAAGTT 9 9983498 0.975851168 7 9 53 1 1.079181246 0.416666667 0.222222222 0.416666667 9 0 0 12 3R:9983454-9983513 7 5 3603 FBgn0037770 662.43 26.1 40.01666667 0.007547967 0.191570881 0.124947938 7 8 7.5 0.15 dme-miR-980-5p 6mer3-8 GAAAAA 3R 9988521 9988526 + 3R_9988521_9988526_+ 0.846982672 0.867508322 0.857245497 0.014513791 Glut4EF FBtr0112576|FBtr0333685|FBtr0333686|FBtr0112577|FBtr0305157 9987787|9988414|9987787|9987787|9987787 9988876|9988876|9995364|9988876|9995364 3R + 9988405 9988673 stop_codon Glut4EF FlyBase G41656.1 TGCAGGGCTAAGTCCACCTGAGCCGCCACCGAGTGCACCGATAGCTTGCTGACTCCTGGATGGCTGTCGGTGGCAGCTGTTGCCACCCCGAGGACACAAAACGCAAAAATGCAAATGAAAAATGGTCTCTTCTTATTTACTCTGCATTGAATTGTGCACCTTAAACACGTAACGGTATCTCTTTTGTTGTTGTGCAGGTGTTTGCCAACTGCCGTGCAAATGTTGCTGACATTTGCGCCCGGGCAACATTTGCAATCTACAATAATCTA 598 9988527 0.930180032 41 581 4567 0.974767596 2.02059802 0.227091633 0.198996656 0.363877822 598 13 6 734 3R:9988405-9988673 6 Glut4EF FBtr0112577|FBtr0333686|FBtr0333685|FBtr0112576|FBtr0305157 9987787|9987787|9988414|9987787|9987787 9988876|9995364|9988876|9988876|9995364 GAAAAA 6mer3-8 dme-miR-980-5p 3R + 9988446 9988553 5'utr Glut4EF FlyBase G31441.1 TAGCTTGCTGACTCCTGGATGGCTGTCGGTGGCAGCTGTTGCCACCCCGAGGACACAAAACGCAAAAATGCAAATGAAAAATGGTCTCTTCTTATTTACTCTGCATTG 257 9988527 0.889713095 15 246 1863 0.966480447 2.061954844 0.078212291 0.319066148 0.511173184 257 10 2 346 3R:9988446-9988553 6 272 3604 FBgn0267336 810.6266667 20.61 31.68 0.335542872 13.19747695 8.585858586 -6 -6 -6 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 3R 9989179 9989184 + 3R_9989179_9989184_+ 0.658938984 0.767038479 0.712988731 0.076437889 Glut4EF FBtr0333686|FBtr0305157 9987787|9987787 9995364|9995364 3R + 9989158 9989185 3'utr Glut4EF FlyBase G41660.1 AATTCATCACGAAGTGGTTTCTGTGTTG 56 9989172 0.866833965 7 53 450 0.941176471 1.329058719 0.882352941 0.214285714 0.352941176 56 2 2 64 3R:9989158-9989185 6 Glut4EF FBtr0333686|FBtr0305157 9987787|9987787 9995364|9995364 TGTGTT 6mer3-8 dme-miR-317-3p 3R + 9989163 9989185 3'utr Glut4EF FlyBase G31444.1 ATCACGAAGTGGTTTCTGTGTTG 45 9989172 0.853386907 7 41 364 0.921875 1.770852012 0.953125 0.333333333 0.53125 45 5 0 59 3R:9989163-9989185 6 50.5 3605 FBgn0267336 810.6266667 20.61 31.68 0.062297482 2.450266861 1.594065657 7 7 7 0.15 dme-miR-304-5p 7mer-m8 TGAGATT 3R 9990038 9990044 + 3R_9990038_9990044_+ 0.61180048 0.607740349 0.609770414 0.002870995 Glut4EF FBtr0333686|FBtr0305157 9987787|9987787 9995364|9995364 3R + 9990016 9990060 3'utr Glut4EF FlyBase G41663.1 CCATCTAGGGATAGCTACGCATTGAGATTGAAGAGCAGGAGAATT 52 9990037 0.768017113 5 52 248 1 1.806179974 0.34375 0.211538462 0.359375 52 0 0 64 3R:9990016-9990060 7 Glut4EF FBtr0333686|FBtr0305157 9987787|9987787 9995364|9995364 TGAGATT 7mer-m8 dme-miR-304-5p 3R + 9990017 9990126 3'utr Glut4EF FlyBase G31445.1 CATCTAGGGATAGCTACGCATTGAGATTGAAGAGCAGGAGAATTTACGAATGAAGAAATGAAAATACACAAGGAATTCTTAACCAAATTGGAAGTACAAACTAAAGTCTA 56 9990037 0.958686242 8 54 262 0.954545455 1.924279286 0.397727273 0.392857143 0.613636364 56 4 0 84 3R:9990017-9990126 7 42 3606 FBgn0267336 810.6266667 20.61 31.68 0.051811767 2.037845706 1.325757576 1 1 1 0.15 dme-miR-1007-3p 8mer-A1 TGAGCTTA 3R 9990258 9990265 + 3R_9990258_9990265_+ 0.624995799 0.623212594 0.624104196 0.001260913 Glut4EF FBtr0333686|FBtr0305157 9987787|9987787 9995364|9995364 3R + 9990238 9990285 3'utr Glut4EF FlyBase G41665.1 AGGAGGAGCGGAGGGAAAATTGAGCTTAGGCGGCAGCAGCTTTAAAAA 11 9990257 0.918249382 4 11 37 1 1.041392685 0.272727273 0 0 11 0 0 11 3R:9990238-9990285 8 Glut4EF FBtr0333686|FBtr0305157 9987787|9987787 9995364|9995364 TGAGCTTA 8mer-A1 dme-miR-1007-3p 3R + 9990241 9990282 3'utr Glut4EF FlyBase G31446.1 AGGAGCGGAGGGAAAATTGAGCTTAGGCGGCAGCAGCTTTAA 7 9990257 0.922158899 4 7 21 1 1.079181246 0.416666667 0.571428571 0.75 7 0 0 12 3R:9990241-9990282 8 9 3607 FBgn0267336 810.6266667 20.61 31.68 0.011102522 0.436681223 0.284090909 1 1 1 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 4 1034707 1034712 + 4_1034707_1034712_+ 0.982025567 0.984320615 0.983173091 0.00162281 ATPsyn-beta FBtr0344754 1034412 1034917 4 + 1034691 1034731 3'utr ATPsyn-beta FlyBase G56605.1 ACACTATGTTATCATTTTGACTGACTGTCGAAAATAAACCA 17 1034706 0.666028667 8 16 152 1 1.301029996 0.15 0.176470588 0.3 17 0 0 20 4:1034691-1034731 6 ATPsyn-beta FBtr0344754 1034412 1034917 TTGACT 6mer3-8 dme-miR-1012-3p 4 + 1034678 1034723 3'utr ATPsyn-beta FlyBase G42754.1 TATATTAAAAATTACACTATGTTATCATTTTGACTGACTGTCGAAA 14 1034707 0.987529492 5 14 129 1 1.230448921 0.411764706 0.214285714 0.352941176 14 0 0 17 4:1034678-1034723 6 15 3608 FBgn0010217 4002.656667 288.0533333 441.7933333 0.003747511 0.05207369 0.033952527 1 0 0.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 4 1035750 1035756 - 4_1035750_1035756_- 0.82312985 0.823292795 0.823211322 0.000115258 CaMKII FBtr0333673|FBtr0300378|FBtr0333674|FBtr0089218|FBtr0333675|FBtr0089219|FBtr0089217|FBtr0100146|FBtr0100148|FBtr0100147 1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286 1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277 4 - 1035744 1035786 3'utr CaMKII FlyBase G57302.1 ACTTAATCATTGTGAAATGATTATACATTTTACCTGATAGTAC 8 1035758 0.756657061 3 7 90 0.888888889 0.602059991 0 0.125 0.222222222 8 0 1 8 4:1035744-1035786 7 CaMKII FBtr0089217|FBtr0100146|FBtr0100148|FBtr0100147|FBtr0333675|FBtr0089219|FBtr0333674|FBtr0089218|FBtr0333673|FBtr0300378 1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286 1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 4 - 1035715 1035774 3'utr CaMKII FlyBase G43304.1 TGAAATGATTATACATTTTACCTGATAGTACATGTTAAAAAAAAACTTGGACTTAAACAC 11 1035758 0.858366592 4 10 74 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 4:1035715-1035774 7 6.5 3609 FBgn0264607 1116.67 52.21333333 80.09666667 0.005820878 0.124489275 0.081151941 2 2 2 0.15 dme-miR-92b-3p 6mer3-8 GTGCAA 4 1037168 1037173 - 4_1037168_1037173_- 0.886236866 0.829500011 0.857868438 0.040119047 CaMKII FBtr0333673|FBtr0300378|FBtr0333674|FBtr0089218|FBtr0333675|FBtr0089219|FBtr0089217|FBtr0100146|FBtr0100148|FBtr0100147 1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286 1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277 4 - 1037127 1037200 3'utr CaMKII FlyBase G57305.1 AATAGTTTATTGCGAATAAAGATGCTAGTGCAAATTTTATTAATTTATTTACCTTTTGAAATAAAACTATCTAA 71 1037178 0.974359831 6 69 430 0.965116279 1.919078092 0.61627907 0.169014085 0.313953488 71 3 0 83 4:1037127-1037200 6 CaMKII FBtr0089217|FBtr0100146|FBtr0100148|FBtr0100147|FBtr0333675|FBtr0089219|FBtr0333674|FBtr0089218|FBtr0333673|FBtr0300378 1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286 1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277 GTGCAA 6mer3-8 dme-miR-92b-3p 4 - 1037153 1037195 3'utr CaMKII FlyBase G43305.1 TTTATTGCGAATAAAGATGCTAGTGCAAATTTTATTAATTTAT 62 1037178 0.855464725 3 61 314 0.990654206 2.025305865 0.635514019 0.403225806 0.654205607 62 1 0 106 4:1037153-1037195 6 66 3610 FBgn0264607 1116.67 52.21333333 80.09666667 0.059104301 1.264044944 0.824004328 5 5 5 0.15 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 4 108111 108118 + 4_108111_108118_+ 0.624888654 0.624910345 0.624899499 1.53E-05 pan FBtr0308615 104412 110059 4 + 108033 108174 3'utr pan FlyBase G56193.1 TCCTATATTTGCATTGCCATCAATTGGTAATTGTAGTTTAAATATTTCTTCAATGCCAAACACATCCCGAAACCCTATTGGTGCTAACCCACGAGATATTAATAATCCCCTTAGCATCAATCAGCTGACTAAAAGACGTGAA 79 108110 0.957714487 11 78 379 0.989247312 1.963787827 0.086021505 0.151898734 0.279569892 79 1 0 92 4:108033-108174 8 pan FBtr0308615 104412 110059 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 4 + 108090 108131 3'utr pan FlyBase G42420.1 AAACACATCCCGAAACCCTATTGGTGCTAACCCACGAGATAT 33 108110 0.920295414 2 32 140 0.961538462 1.698970004 0.076923077 0.454545455 0.653846154 33 2 0 50 4:108090-108131 8 47.5 3611 FBgn0085432 3045.83 84.67333333 129.51 0.015595092 0.56097945 0.366767045 1 1 1 0.15 dme-miR-277-3p 7mer-m8 TGCATTT 4 108825 108831 + 4_108825_108831_+ 0.614887513 0.614041827 0.61446467 0.000598 pan FBtr0309803|FBtr0100245|FBtr0308615|FBtr0089162|FBtr0112657|FBtr0089161 108491|108491|104412|108491|108491|108491 114270|109770|110059|110059|110059|110059 4 + 108736 108853 3'utr pan FlyBase G56197.2 AAAGAAACATGAGTCAAATCTCAGGCTAGGCCGTGCCAAATAGAATAAACAGACAATACACACTAAAACTTAGTTACATAAACATCTATTGCATTTGACACCTTATAAAATAATATTT 160 108824 0.994017517 10 156 1233 0.97382199 1.968482949 0.020942408 0.15 0.287958115 160 4 1 186 4:108736-108853 7 pan FBtr0089161|FBtr0089162|FBtr0112657|FBtr0308615|FBtr0309803|FBtr0100245 108491|108491|108491|104412|108491|108491 110059|110059|110059|110059|114270|109770 TGCATTT 7mer-m8 dme-miR-277-3p 4 + 108737 108856 3'utr pan FlyBase G42425.1 AAGAAACATGAGTCAAATCTCAGGCTAGGCCGTGCCAAATAGAATAAACAGACAATACACACTAAAACTTAGTTACATAAACATCTATTGCATTTGACACCTTATAAAATAATATTTTCA 93 108824 0.976874429 8 88 677 0.939189189 2.1430148 0.054054054 0.430107527 0.641891892 93 9 0 139 4:108737-108856 7 108.5 3612 FBgn0085432 3045.83 84.67333333 129.51 0.035622474 1.281395166 0.837773145 1 1 1 0.15 dme-miR-31a-5p 7mer-A1 CTTGCCA 4 108935 108941 + 4_108935_108941_+ 0.823084335 0.823348848 0.823216592 0.00018703 pan FBtr0309803|FBtr0100245|FBtr0308615|FBtr0089162|FBtr0112657|FBtr0089161 108491|108491|104412|108491|108491|108491 114270|109770|110059|110059|110059|110059 4 + 108877 108953 3'utr pan FlyBase G56198.1 TCTATTTATTTAGCTTAACACAACCAAATTATGTATTTTATTTTAAAATTAGACACAACTTGCCAAAATCCATTAAT 14 108914 0.98663349 9 13 118 0.928571429 1.113943352 0 0 0 14 1 0 13 4:108877-108953 7 pan FBtr0089161|FBtr0089162|FBtr0112657|FBtr0308615|FBtr0309803|FBtr0100245 108491|108491|108491|104412|108491|108491 110059|110059|110059|110059|114270|109770 CTTGCCA 7mer-A1 dme-miR-31a-5p 4 + 108896 108947 3'utr pan FlyBase G42426.1 ACAACCAAATTATGTATTTTATTTTAAAATTAGACACAACTTGCCAAAATCC 7 108905 0.933265951 5 6 51 1 1 0 0.285714286 0.5 7 0 0 10 4:108896-108947 7 4 3613 FBgn0085432 3045.83 84.67333333 129.51 0.001313271 0.047240375 0.030885646 21 30 25.5 0.15 dme-miR-1006-3p 8mer-A1 CGAATTTA 4 109902 109909 + 4_109902_109909_+ 0.671697245 0.666795965 0.669246605 0.003465672 pan FBtr0309803|FBtr0308615|FBtr0089162|FBtr0112657|FBtr0089161 108491|104412|108491|108491|108491 114270|110059|110059|110059|110059 4 + 109828 109949 3'utr pan FlyBase G56204.1 ATATGTGTACGATATATATTATAAGCTAAATGTAAATATGTATTTTCTTATATAGAACGTACTGATAATCTTTACGAATTTATTGACCATAAGACCTGATAGCCTTTATTCCATGTAAAACG 197 109917 0.870164064 21 179 1457 0.903361345 1.55428721 0.071428571 0.172588832 0.31512605 197 18 5 215 4:109828-109949 8 pan FBtr0089161|FBtr0089162|FBtr0112657|FBtr0308615|FBtr0309803 108491|108491|108491|104412|108491 110059|110059|110059|110059|114270 CGAATTTA 8mer-A1 dme-miR-1006-3p 4 + 109850 109972 3'utr pan FlyBase G42433.1 AAGCTAAATGTAAATATGTATTTTCTTATATAGAACGTACTGATAATCTTTACGAATTTATTGACCATAAGACCTGATAGCCTTTATTCCATGTAAAACGTAAAATCCACATCTACAAACGAA 126 109927 0.982028755 19 117 869 0.922680412 2.252853031 0.113402062 0.404761905 0.613402062 126 15 0 179 4:109850-109972 8 52 3614 FBgn0085432 3045.83 84.67333333 129.51 0.017072522 0.614124872 0.401513397 -15 -25 -20 0.15 dme-miR-190-5p 8mer-m1 ACATATCT 4 110236 110243 + 4_110236_110243_+ 0.563854329 0.412331038 0.488092683 0.107143153 pan FBtr0309803 108491 114270 4 + 110164 110279 3'utr pan FlyBase G56206.1 TTGTTTTTAATGTGTTAGTTATTTAAAATGCTTTAGGTTTAATTATCTCATATGTACACCGGTACTTAATATACATATCTTGATTTTCCGGAATGACAATCCTGTATATCCTATAA 22 110234 0.988908584 11 19 192 0.892857143 1.397940009 0.214285714 0.181818182 0.357142857 22 3 0 25 4:110164-110279 8 pan FBtr0309803 108491 114270 ACATATCT 8mer-m1 dme-miR-190-5p 4 + 110176 110263 3'utr pan FlyBase G42436.1 TGTTAGTTATTTAAAATGCTTTAGGTTTAATTATCTCATATGTACACCGGTACTTAATATACATATCTTGATTTTCCGGAATGACAAT 32 110233 0.980541349 15 30 323 0.9375 1.653212514 0.104166667 0.375 0.583333333 32 3 0 45 4:110176-110263 8 11 3615 FBgn0085432 3045.83 84.67333333 129.51 0.003611495 0.129911031 0.084935526 2 3 2.5 0.15 dme-miR-970-3p 6mer3-8 TCTTAT 4 110630 110635 + 4_110630_110635_+ 0.999075507 0.968098216 0.983586861 0.021904259 pan FBtr0309803 108491 114270 4 + 110493 110807 3'utr pan FlyBase G56209.1 TTTCAATTGTAATGCCAATAAATTTTTAAAATATCATTCTTACCCTCTGGGTTGATTAACGTGTATCTAGTAGTGTAGAAAATCAACTTTACTATAGTAACTAAAATTTAAATGGTAAACAACTTTTAAAACGTATCTCTTATTTTACTTTATATTAGGAGTATTATAATTTTTAAATTGTATAGACACAAAATCTTCATTGACCGTGCTAAAGTAAAGACATAAATGCGAGCATAACTAAGCATTTTAATAACCTTATTTTAACTAAGATATTTACAGTATTGCCAAATGTTGTTGCGAATATATATATAAAAA 181 110632 0.987794173 36 176 1586 0.967741935 2.322219295 0.129032258 0.165745856 0.304147465 181 7 0 210 4:110493-110807 6 pan FBtr0309803 108491 114270 TCTTAT 6mer3-8 dme-miR-970-3p 4 + 110604 110664 3'utr pan FlyBase G42438.2 ATGGTAAACAACTTTTAAAACGTATCTCTTATTTTACTTTATATTAGGAGTATTATAATTT 43 110632 0.693535057 7 40 439 0.964285714 1.73239376 0.017857143 0.285714286 0.464285714 42 2 0 54 4:110604-110664 6 57.5 3616 FBgn0085432 3045.83 84.67333333 129.51 0.01887827 0.679080387 0.44398116 -2 -2 -2 0.15 dme-miR-970-3p 6mer2-7 CTTATG 4 110894 110899 + 4_110894_110899_+ 0.904087363 0.822037015 0.863062189 0.058018394 pan FBtr0309803 108491 114270 4 + 110861 110921 3'utr pan FlyBase G56210.1 ATTTCCCTTTATTGTCTTTCCTTTTTCATAAGCCTTATGTAACTGATAGCATTTGTAAATA 27 110897 0.985390143 12 26 206 0.96875 1.491361694 0.21875 0.148148148 0.28125 27 1 0 31 4:110861-110921 6 pan FBtr0309803 108491 114270 CTTATG 6mer2-7 dme-miR-970-3p 4 + 110881 110920 3'utr pan FlyBase G42440.1 CTTTTTCATAAGCCTTATGTAACTGATAGCATTTGTAAAT 11 110898 0.984870316 4 8 82 0.692307692 0.954242509 0 0.181818182 0.307692308 11 4 0 9 4:110881-110920 6 16.5 3617 FBgn0085432 3045.83 84.67333333 129.51 0.005417243 0.194866546 0.127403289 -3 -4 -3.5 0.15 dme-miR-252-5p 6mer3-8 GTACTT 4 1115157 1115162 - 4_1115157_1115162_- 0.996500673 0.999988887 0.99824478 0.00246653 Cals FBtr0345193|FBtr0089208 1112872|1115077 1115826|1115826 4 - 1115137 1115231 3'utr Cals FlyBase G57337.1 AACTTAGATTAAGGAACATATCGAAGCTATAAAAAATTTATTTTCAACCGACCATAAACTTGTGAAATTGTACTTTTAAAATAGAATTTTTAATT 23 1115163 0.966308239 9 23 130 1 1.462397998 0.068965517 0.173913043 0.344827586 23 0 0 29 4:1115137-1115231 6 Cals FBtr0345193|FBtr0089208 1112872|1115077 1115826|1115826 GTACTT 6mer3-8 dme-miR-252-5p 4 - 1115152 1115183 3'utr Cals FlyBase G43324.1 CGACCATAAACTTGTGAAATTGTACTTTTAAA 6 1115163 0.697687705 2 6 41 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 4:1115152-1115183 6 8.5 3618 FBgn0039928 3212.163333 100.7466667 154.9366667 0.002646192 0.084370037 0.054861126 1 1 1 0.15 dme-miR-184-3p 7mer-m8 TCCGTCC 4 1115354 1115360 - 4_1115354_1115360_- 0.661609955 0.661613112 0.661611533 2.19E-06 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 4 - 1115271 1115478 3'utr Cals FlyBase G57338.1 AAATATACACATAAGATCTATTTAATTTATAGTTTGTCAGCCCTCACCTTAAGATGTAAAATGCACATGTCTACCAAATTTCAACTGAATTCTGTCGCAATGCATAGGAGGAAGTTTCTCCGTCCCAATAATTTAAGCCTAATAATAAAACATAAAAAAAATTTGAAATGGATCGTAATACCCAAACAATGTTGACTTATTTAATAAA 253 1115361 0.983445027 36 232 1788 0.918644068 1.8309093 0.088135593 0.134387352 0.257627119 253 21 3 271 4:1115271-1115478 7 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 TCCGTCC 7mer-m8 dme-miR-184-3p 4 - 1115338 1115477 3'utr Cals FlyBase G43326.1 AATATACACATAAGATCTATTTAATTTATAGTTTGTCAGCCCTCACCTTAAGATGTAAAATGCACATGTCTACCAAATTTCAACTGAATTCTGTCGCAATGCATAGGAGGAAGTTTCTCCGTCCCAATAATTTAAGCCTA 119 1115361 0.82768637 25 108 801 0.926966292 2.217483944 0.078651685 0.361344538 0.573033708 119 13 0 165 4:1115338-1115477 7 68 3619 FBgn0039928 3212.163333 100.7466667 154.9366667 0.021169534 0.674960296 0.438889008 1 1 1 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 4 1115401 1115406 - 4_1115401_1115406_- 0.835250275 0.956589311 0.895919793 0.08579963 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 4 - 1115271 1115478 3'utr Cals FlyBase G57338.1 AAATATACACATAAGATCTATTTAATTTATAGTTTGTCAGCCCTCACCTTAAGATGTAAAATGCACATGTCTACCAAATTTCAACTGAATTCTGTCGCAATGCATAGGAGGAAGTTTCTCCGTCCCAATAATTTAAGCCTAATAATAAAACATAAAAAAAATTTGAAATGGATCGTAATACCCAAACAATGTTGACTTATTTAATAAA 253 1115399 0.983445027 36 232 1788 0.918644068 1.8309093 0.088135593 0.134387352 0.257627119 253 21 3 271 4:1115271-1115478 6 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 4 - 1115338 1115477 3'utr Cals FlyBase G43326.1 AATATACACATAAGATCTATTTAATTTATAGTTTGTCAGCCCTCACCTTAAGATGTAAAATGCACATGTCTACCAAATTTCAACTGAATTCTGTCGCAATGCATAGGAGGAAGTTTCTCCGTCCCAATAATTTAAGCCTA 119 1115399 0.82768637 25 108 801 0.926966292 2.217483944 0.078651685 0.361344538 0.573033708 119 13 0 165 4:1115338-1115477 6 70.5 3620 FBgn0039928 3212.163333 100.7466667 154.9366667 0.021947825 0.699775013 0.455024634 -7 -7 -7 0.15 dme-miR-305-5p 8mer-m1 AGTACAAT 4 1115532 1115539 - 4_1115532_1115539_- 0.570363044 0.570363044 0.570363044 0 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 4 - 1115501 1115556 3'utr Cals FlyBase G57339.1 AAATATAGCTAAGGTATAGTACAATTATTATGTAACCAGCGTCGCTAGATCCATAA 15 1115531 0.721025649 5 12 107 0.85 1.230448921 0.05 0.266666667 0.45 15 3 0 17 4:1115501-1115556 8 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 AGTACAAT 8mer-m1 dme-miR-305-5p 4 - 1115511 1115558 3'utr Cals FlyBase G43327.1 AAAAATATAGCTAAGGTATAGTACAATTATTATGTAACCAGCGTCGCT 11 1115531 0.724160438 7 8 75 0.769230769 1 0.076923077 0.181818182 0.307692308 11 3 0 10 4:1115511-1115558 8 8.5 3621 FBgn0039928 3212.163333 100.7466667 154.9366667 0.002646192 0.084370037 0.054861126 -8 -8 -8 0.15 dme-miR-276a-3p 6mer3-8 AGTTCC 4 1115721 1115726 - 4_1115721_1115726_- 0.920463214 0.925991829 0.923227522 0.003909311 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 4 - 1115654 1115736 3'utr Cals FlyBase G57340.2 GTTATAAATGAGTTCCAAAGAGTCTGCATATATGGCTGCAGGCATAATTGTAAAGACGTGCATTTATAGTTTTTTTTGCAACA 31 1115724 0.825079658 7 27 186 0.909090909 1.176091259 0.212121212 0.032258065 0.090909091 31 2 1 30 4:1115654-1115736 6 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 AGTTCC 6mer3-8 dme-miR-276a-3p 4 - 1115692 1115738 3'utr Cals FlyBase G43328.1 AAGTTATAAATGAGTTCCAAAGAGTCTGCATATATGGCTGCAGGCAT 11 1115724 0.975506843 2 10 60 0.923076923 1.079181246 0.153846154 0.181818182 0.307692308 11 1 0 12 4:1115692-1115738 6 12.5 3622 FBgn0039928 3212.163333 100.7466667 154.9366667 0.003891458 0.124073584 0.080678127 -2 -2 -2 0.15 dme-miR-932-5p 7mer-m8 GGAATTG 4 1125061 1125067 + 4_1125061_1125067_+ 0.702972848 0.702963935 0.702968392 6.29E-06 Arf102F FBtr0089192 1125035 1125325 4 + 1125040 1125142 3'utr Arf102F FlyBase G56613.1 TATTCCTTATATTGTAAGATAGGAATTGCTGTTCTCGTATGCTGAAAACTAGATTTTAAATAAACTTGTAAATGTATATAAACTCGTTTGGAACTTTGTTGTA 43 1125079 0.867436297 14 40 362 0.9375 1.352182518 0.291666667 0.11627907 0.208333333 43 2 1 45 4:1125040-1125142 7 Arf102F FBtr0089192 1125035 1125325 GGAATTG 7mer-m8 dme-miR-932-5p 4 + 1125050 1125102 3'utr Arf102F FlyBase G42763.1 ATTGTAAGATAGGAATTGCTGTTCTCGTATGCTGAAAACTAGATTTTAAATAA 40 1125067 0.690812684 8 36 293 0.938461538 1.183269844 0.215384615 0.5 0.692307692 40 1 3 61 4:1125050-1125102 7 31 3623 FBgn0013749 854.0466667 143.2933333 218.6 0.036297782 0.216339444 0.141811528 -18 -6 -12 0.15 dme-miR-31a-5p 6mer2-7 CTTGCC 4 1125186 1125191 + 4_1125186_1125191_+ 0.991071756 0.99965691 0.995364333 0.006070582 Arf102F FBtr0089192 1125035 1125325 4 + 1125152 1125217 3'utr Arf102F FlyBase G56614.1 TGTCCACGTTTTATGTGTTGGTGAGAAAACTGCACTTGCCTTAGTTGTATTTTTAAAAATTAGTGA 12 1125191 0.987250927 4 12 119 1 1.176091259 0.2 0.25 0.4 12 0 0 15 4:1125152-1125217 6 Arf102F FBtr0089192 1125035 1125325 CTTGCC 6mer2-7 dme-miR-31a-5p 4 + 1125136 1125204 3'utr Arf102F FlyBase G42764.1 TGTTGTAAATTTAAAATGTCCACGTTTTATGTGTTGGTGAGAAAACTGCACTTGCCTTAGTTGTATTTT 13 1125192 0.981910858 7 12 92 1 1.230448921 0.352941176 0.307692308 0.470588235 13 0 0 17 4:1125136-1125204 6 9.5 3624 FBgn0013749 854.0466667 143.2933333 218.6 0.011123514 0.066297571 0.043458371 -5 -6 -5.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 4 112846 112853 + 4_112846_112853_+ 0.589731898 0.629135437 0.609433668 0.027862482 pan FBtr0309803|FBtr0309803|FBtr0309803 108491|108491|108491 114270|114270|114270 4 + 112824 112867 3'utr pan FlyBase G56212.1 TAGAAATTCAACAAATACACTGCTGTGATAAATCTAATTAACGA 28 112844 0.834744802 3 26 167 0.933333333 1.447158031 0 0.071428571 0.133333333 28 2 0 28 4:112824-112867 8 pan FBtr0309803|FBtr0309803|FBtr0309803 108491|108491|108491 114270|114270|114270 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 4 + 112812 112859 3'utr pan FlyBase G42442.1 TTACATCAAGTTTAGAAATTCAACAAATACACTGCTGTGATAAATCTA 17 112844 0.977483512 5 16 107 0.966666667 1.462397998 0 0.411764706 0.666666667 17 1 0 29 4:112812-112859 8 21.5 3625 FBgn0085432 3045.83 84.67333333 129.51 0.007058831 0.253917014 0.166010347 2 2 2 0.15 dme-miR-14-3p 7mer-m8 AAGACTG 4 113107 113113 + 4_113107_113113_+ 0.638849528 0.663827075 0.651338302 0.01766183 pan FBtr0309803 108491 114270 4 + 113087 113126 3'utr pan FlyBase G56213.1 AAAGGCCATTGCCAATTTAAAAGACTGTTTAACACAAATT 22 113115 0.662937892 6 21 153 0.931034483 1.431363764 0 0.318181818 0.482758621 22 2 0 27 4:113087-113126 7 pan FBtr0309803 108491 114270 AAGACTG 7mer-m8 dme-miR-14-3p 4 + 113088 113124 3'utr pan FlyBase G42443.1 AAGGCCATTGCCAATTTAAAAGACTGTTTAACACAAA 13 113114 0.653518928 4 12 96 0.875 1.322219295 0 0.461538462 0.708333333 13 3 0 21 4:113088-113124 7 17.5 3626 FBgn0085432 3045.83 84.67333333 129.51 0.00574556 0.20667664 0.135124701 -8 -7 -7.5 0.15 dme-miR-14-3p 6mer2-7 AGACTG 4 1223079 1223084 + 4_1223079_1223084_+ 0.668928758 0.535122108 0.602025433 0.094615625 Mitf FBtr0307327|FBtr0307328|FBtr0307326|FBtr0307329 1222790|1222790|1222790|1222790 1223450|1223450|1224467|1224467 4 + 1223051 1223100 5'utr Mitf FlyBase G56626.2 ACGTTAGTTTTAGTAAATGGAAACTGTTAGACTGTGACGAAACAAATATA 338 1223077 0.638489651 6 331 1807 0.985294118 2.303196057 0.424019608 0.174556213 0.316176471 338 5 1 402 4:1223051-1223100 6 Mitf FBtr0307327|FBtr0307328|FBtr0307326|FBtr0307329 1222790|1222790|1222790|1222790 1223450|1223450|1224467|1224467 AGACTG 6mer2-7 dme-miR-14-3p 4 + 1223051 1223099 5'utr Mitf FlyBase G42775.1 ACGTTAGTTTTAGTAAATGGAAACTGTTAGACTGTGACGAAACAAATAT 269 1223078 0.623494096 7 261 1355 0.976439791 2.571708832 0.363874346 0.31598513 0.518324607 269 9 0 373 4:1223051-1223099 6 302 3627 FBgn0263112 1506.45 56.91333333 87.3 0.200471307 5.306313693 3.459335624 2 1 1.5 0.15 dme-miR-184-5p 6mer3-8 TGATAA 4 1223214 1223219 + 4_1223214_1223219_+ 0.880160448 0.858149155 0.869154802 0.015564269 Mitf FBtr0307327|FBtr0307328|FBtr0307326|FBtr0307329 1222790|1222790|1222790|1222790 1223450|1223450|1224467|1224467 4 + 1223101 1223254 5'utr Mitf FlyBase G56627.1 TGTGTCAACACTTACTTCCAAGAACTACATAGACACAAACAAAATATACCGATGAGAAAAAAAGAATATAAAGTTTGTAAGTTATTGTGGATTTTTTCATAAGATTTGTGATTTGATAAAAAAAACACGAAATAAGAATGGTCTAATATTATAT 53 1223213 0.982291435 15 52 386 0.985294118 1.826074803 0.029411765 0.245283019 0.411764706 53 1 0 67 4:1223101-1223254 6 Mitf FBtr0307327|FBtr0307328|FBtr0307326|FBtr0307329 1222790|1222790|1222790|1222790 1223450|1223450|1224467|1224467 TGATAA 6mer3-8 dme-miR-184-5p 4 + 1223105 1223257 5'utr Mitf FlyBase G42776.1 TCAACACTTACTTCCAAGAACTACATAGACACAAACAAAATATACCGATGAGAAAAAAAGAATATAAAGTTTGTAAGTTATTGTGGATTTTTTCATAAGATTTGTGATTTGATAAAAAAAACACGAAATAAGAATGGTCTAATATTATATATA 36 1223213 0.946059324 14 35 305 0.965517241 1.748188027 0 0.444444444 0.655172414 36 2 0 56 4:1223105-1223257 6 24 3628 FBgn0263112 1506.45 56.91333333 87.3 0.015931495 0.421693803 0.274914089 1 1 1 0.15 dme-miR-184-5p 6mer3-8 TGATAA 4 1223318 1223323 + 4_1223318_1223323_+ 0.610867989 0.643362039 0.627115014 0.022976728 Mitf FBtr0307327|FBtr0307328|FBtr0307326|FBtr0307329 1222790|1222790|1222790|1222790 1223450|1223450|1224467|1224467 4 + 1223263 1223352 5'utr Mitf FlyBase G56628.1 AATCTAAATCATCAGGTATAATTTCAGAGCGCCTTCCTTTTCAAATAAGGAGTTGTGATAATTGTGTATATTAACATTGACAAATGTTTT 59 1223315 0.936208323 14 56 486 0.943661972 1.826074803 0.098591549 0.186440678 0.323943662 59 4 0 67 4:1223263-1223352 6 Mitf FBtr0307327|FBtr0307328|FBtr0307326|FBtr0307329 1222790|1222790|1222790|1222790 1223450|1223450|1224467|1224467 TGATAA 6mer3-8 dme-miR-184-5p 4 + 1223269 1223346 5'utr Mitf FlyBase G42777.1 AATCATCAGGTATAATTTCAGAGCGCCTTCCTTTTCAAATAAGGAGTTGTGATAATTGTGTATATTAACATTGACAAA 45 1223324 0.734396296 13 43 351 0.938461538 1.086359831 0.276923077 0.377777778 0.569230769 45 0 4 61 4:1223269-1223346 6 29 3629 FBgn0263112 1506.45 56.91333333 87.3 0.019250556 0.509546679 0.332187858 3 -6 -1.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 4 1223688 1223694 + 4_1223688_1223694_+ 0.751607815 0.732903698 0.742255756 0.013225796 Mitf FBtr0307326|FBtr0307326|FBtr0307326|FBtr0307329|FBtr0307329|FBtr0307329 1222790|1222790|1222790|1222790|1222790|1222790 1224467|1224467|1224467|1224467|1224467|1224467 4 + 1223622 1223708 3'utr Mitf FlyBase G56629.1 ATGATTCGTTAAAGTTGTCCGATCTTCATGAGTGCTACAGCATTGAAAATGTAGTCCAAAAACTAATGTGATAATATAATAAGAACT 33 1223685 0.863521711 12 30 222 0.95 1.579783597 0.25 0.212121212 0.35 33 2 0 38 4:1223622-1223708 7 Mitf FBtr0307326|FBtr0307326|FBtr0307326|FBtr0307329|FBtr0307329|FBtr0307329 1222790|1222790|1222790|1222790|1222790|1222790 1224467|1224467|1224467|1224467|1224467|1224467 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 4 + 1223629 1223711 3'utr Mitf FlyBase G42779.1 GTTAAAGTTGTCCGATCTTCATGAGTGCTACAGCATTGAAAATGTAGTCCAAAAACTAATGTGATAATATAATAAGAACTTAA 23 1223686 0.971937342 7 22 149 0.971428571 1.230448921 0.085714286 0.391304348 0.6 23 0 1 34 4:1223629-1223711 7 15.5 3630 FBgn0263112 1506.45 56.91333333 87.3 0.01028909 0.272343915 0.177548683 3 2 2.5 0.15 dme-bantam-3p 6mer3-8 TGATCT 4 1225679 1225684 - 4_1225679_1225684_- 0.999990364 0.999177509 0.999583936 0.000574807 Dyrk3 FBtr0100406 1225087 1226157 4 - 1225672 1225732 3'utr Dyrk3 FlyBase G57397.1 ATCGAATGTGTACATTATTTATTTAATAATTCCGAATTTTTAAAACAGTGATCTTTGCCAA 9 1225682 0.990629088 6 8 76 0.916666667 0.740362689 0 0.333333333 0.5 9 0 1 11 4:1225672-1225732 6 Dyrk3 FBtr0100406 1225087 1226157 TGATCT 6mer3-8 dme-bantam-3p 4 - 1225665 1225694 3'utr Dyrk3 FlyBase G43373.1 TTTAAAACAGTGATCTTTGCCAATTTTTTT 8 1225680 0.625997628 3 7 57 0.916666667 1.041392685 0 0.25 0.5 8 1 0 11 4:1225665-1225694 6 7.5 3631 FBgn0027101 1644.923333 56.32666667 86.10666667 0.004559483 0.133151852 0.08710127 -2 -4 -3 0.15 dme-miR-276a-3p 8mer-A1 AGTTCCTA 4 142899 142906 + 4_142899_142906_+ 0.637903946 0.637219334 0.63756164 0.000484085 CG32000 FBtr0089451|FBtr0089448|FBtr0089449|FBtr0333161|FBtr0113417 142794|142794|142794|142794|142794 143123|143123|143123|143123|143123 4 + 142850 143089 3'utr CG32000 FlyBase G56253.1 TTAGGAATTTCCATTATTAATACAGTAGAAAATGTAGGCAAAATTATTTAGTTCCTATTTAGTTTTTTTAGTAATCTTAGTATTTCTAATTGTACTTACATCAAAGATAACTTTGTATTAGCTATGAACACTTTTGTCTTTCTATGTTTAAAACGGCGTTGTTTCTTGATTATAATTAAGTGTTTGATGTTTATATACATAAGCAAAAATTCATATAGGCTGTATAATAAGCATTGGAGT 206 142897 0.934845437 41 188 2096 0.92519685 1.893946608 0.165354331 0.175609756 0.334645669 205 17 2 235 4:142850-143089 8 CG32000 FBtr0089451|FBtr0113417|FBtr0333161|FBtr0089449|FBtr0089448 142794|142794|142794|142794|142794 143123|143123|143123|143123|143123 AGTTCCTA 8mer-A1 dme-miR-276a-3p 4 + 142845 143032 3'utr CG32000 FlyBase G42466.1 TACTTTTAGGAATTTCCATTATTAATACAGTAGAAAATGTAGGCAAAATTATTTAGTTCCTATTTAGTTTTTTTAGTAATCTTAGTATTTCTAATTGTACTTACATCAAAGATAACTTTGTATTAGCTATGAACACTTTTGTCTTTCTATGTTTAAAACGGCGTTGTTTCTTGATTATAATTAAGTGT 105 142897 0.992228598 31 98 1136 0.944099379 2.181843588 0.198757764 0.40952381 0.614906832 105 9 0 152 4:142845-143032 8 41.5 3632 FBgn0052000 5598.68 138.82 213.5633333 0.007412462 0.298948278 0.194321747 2 2 2 0.15 dme-miR-980-5p 8mer-m1 GAAAAACT 4 177919 177926 - 4_177919_177926_- 0.536005937 0.469232788 0.502619362 0.047215712 Arl4 FBtr0333677 177436 178817 4 - 177893 177994 intron-3'utr Arl4 FlyBase G56733.1 AGGGTGTTCCCGTTCTGATACTAGCAAATAAACAGGATCTGCCCAACGCTTGTGGTGCAATGGAACTGGAAAAACTTTTAGGACTGAACGAACTTTACAACC 21 177917 0.972408134 11 20 117 0.956521739 1.342422681 0.130434783 0.095238095 0.173913043 21 1 0 22 4:177893-177994 8 Arl4 FBtr0333677 177436 178817 GAAAAACT 8mer-m1 dme-miR-980-5p 4 - 177898 177952 3'utr Arl4 FlyBase G42857.1 CCAACGCTTGTGGTGCAATGGAACTGGAAAAACTTTTAGGACTGAACGAACTTTA 23 177917 0.694296884 6 16 100 0.727272727 0.77815125 0.090909091 0.347826087 0.545454545 23 6 3 24 4:177898-177952 8 16.5 3633 FBgn0039889 1176.36 144.06 220.9733333 0.014026318 0.11453561 0.074669643 -9 -9 -9 0.15 dme-miR-999-3p 6mer3-8 AGTTAA 4 196970 196975 - 4_196970_196975_- 0.950663044 0.976100236 0.96338164 0.017986817 CG31998 FBtr0308249 196673 197877 4 - 196912 197077 3'utr CG31998 FlyBase G56757.2 GCTTATAAAAATAAAAAAATTCTTAAGACTACAACAACCTAAATTCGTTTAATATAAGTTAAAAGCCTGTTACAATTAAACGTTAATTACATAGTACTGATTAGTTAAGGGTATTGCATTTTCTATTGTTAAATCTTCCAAAATATACGGATCCTTATTAATAATT 400 196964 0.869040397 36 373 3310 0.942184154 1.865301426 0.143468951 0.1475 0.269807281 400 22 5 440 4:196912-197077 6 CG31998 FBtr0308249 196673 197877 AGTTAA 6mer3-8 dme-miR-999-3p 4 - 196892 197071 3'utr CG31998 FlyBase G42876.1 AAAAATAAAAAAATTCTTAAGACTACAACAACCTAAATTCGTTTAATATAAGTTAAAAGCCTGTTACAATTAAACGTTAATTACATAGTACTGATTAGTTAAGGGTATTGCATTTTCTATTGTTAAATCTTCCAAAATATACGGATCCTTATTAATAATTATATTTAGGTGTTCAATTGT 276 197005 0.986992216 33 258 2251 0.935866983 2.118374967 0.173396675 0.376811594 0.591448931 276 25 2 394 4:196892-197071 6 151.5 3634 FBgn0051998 3188.316667 75.81333333 116.5333333 0.047517237 1.99832923 1.300057208 -11 30 9.5 0.15 dme-miR-184-5p 6mer2-7 GATAAG 4 197149 197154 - 4_197149_197154_- 0.998394684 0.998638754 0.998516719 0.000172605 CG31998 FBtr0308249 196673 197877 4 - 197137 197191 3'utr CG31998 FlyBase G56758.1 TTTAAAGTTCATAAAAGAAATATTGGTTTTCATGTAAGATAAGTATTTTAAAAAG 14 197159 0.988962131 6 12 117 0.941176471 0.903089987 0.176470588 0.214285714 0.352941176 14 0 1 16 4:197137-197191 6 CG31998 FBtr0308249 196673 197877 GATAAG 6mer2-7 dme-miR-184-5p 4 - 197131 197169 3'utr CG31998 FlyBase G42878.1 TTGGTTTTCATGTAAGATAAGTATTTTAAAAAGGCCGTA 8 197159 0.977043385 2 8 71 1 1 0.2 0.25 0.4 8 0 0 10 4:197131-197169 6 9.5 3635 FBgn0051998 3188.316667 75.81333333 116.5333333 0.002979629 0.125307773 0.081521739 5 5 5 0.15 dme-miR-33-5p 6mer2-7 AATGCA 4 197359 197364 - 4_197359_197364_- 0.667752117 0.713601274 0.690676696 0.03242028 CG31998 FBtr0308249 196673 197877 4 - 197301 197417 3'utr CG31998 FlyBase G56759.1 TAATAATGTAACATACTGATTAAATTTATTATAAAAAAGTATGCGGTCCGATTAATGCAGGATACGAACTTGAAAAATTAAATATATAACATGATATTTTTAGATTATGATTTAAAA 41 197362 0.841691435 14 41 252 1 1.698970004 0.18 0.170731707 0.32 41 0 0 50 4:197301-197417 6 CG31998 FBtr0308249 196673 197877 AATGCA 6mer2-7 dme-miR-33-5p 4 - 197339 197412 3'utr CG31998 FlyBase G42879.1 ATGTAACATACTGATTAAATTTATTATAAAAAAGTATGCGGTCCGATTAATGCAGGATACGAACTTGAAAAATT 27 197362 0.953208813 5 26 130 1 1.568201724 0.324324324 0.333333333 0.513513514 27 0 0 37 4:197339-197412 6 26 3636 FBgn0051998 3188.316667 75.81333333 116.5333333 0.008154773 0.342947591 0.223112128 -2 -2 -2 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 4 212980 212986 + 4_212980_212986_+ 0.521142734 0.520313081 0.520727908 0.000586616 Crk FBtr0304871|FBtr0345065|FBtr0345064 212179|211892|212726 213165|213165|213165 4 + 212892 213006 3'utr Crk FlyBase G56262.1 TAAAACAAACATTAATGGGCAATGGGAGGGAGAATTAAATGGAAAAAATGGTCATTTTCCCTTCACGCACGTTGAATTTGTCGATGATTGTGATTTAAGCAAAAACTCCACAGAA 117 212980 0.952349745 11 109 972 0.944827586 1.291622527 0.379310345 0.179487179 0.337931034 117 2 6 137 4:212892-213006 7 Crk FBtr0304871|FBtr0345065|FBtr0345064 212179|211892|212726 213165|213165|213165 TGTGATT 7mer-m1 dme-miR-308-3p 4 + 212938 213102 stop_codon Crk FlyBase G42477.1 AATGGTCATTTTCCCTTCACGCACGTTGAATTTGTCGATGATTGTGATTTAAGCAAAAACTCCACAGAAATATGCTAAATAGGAAGGAATGGAAGGAATTTCTTTTGATAATTTTGATTTTTGAGCTAATTGTATGATTAATAAGTTGTGCATACCAATTGTTAA 86 212986 0.986669183 16 85 727 0.992248062 2.10720997 0.310077519 0.360465116 0.573643411 86 1 0 128 4:212938-213102 7 86.5 3637 FBgn0024811 1520.34 187.5933333 288.2066667 0.056895168 0.461103806 0.30013185 0 -6 -3 0.15 dme-miR-308-3p 7mer-m1 TGTGATT 4 241000 241006 + 4_241000_241006_+ 0.442910064 0.442937154 0.442923609 1.92E-05 CG1674 FBtr0089119 240876 241318 4 + 240910 241026 5'utr CG1674 FlyBase G56268.1 ACACTGATTGCAACTTTTAGTACAGTGGTCAAGAAAAATCTCATTAGTCTAACTCTCCACTATAACAGGGATACCCCGTTTCCCATTGTATGTGATTTTTGTTAAAAATTTAAGTTT 46 240996 0.992683486 13 43 501 0.924528302 1.389166084 0.20754717 0.152173913 0.264150943 46 3 1 49 4:240910-241026 7 CG1674 FBtr0089119 240876 241318 TGTGATT 7mer-m1 dme-miR-308-3p 4 + 240974 241015 5'utr CG1674 FlyBase G42483.1 ACAGGGATACCCCGTTTCCCATTGTATGTGATTTTTGTTAAA 25 240996 0.786598585 4 22 313 0.794117647 1.431363764 0.205882353 0.32 0.5 25 7 0 27 4:240974-241015 7 27.5 3638 FBgn0039897 839.9 47.17666667 72.43333333 0.032741993 0.582915283 0.379659457 4 4 4 0.15 dme-bantam-3p 8mer-A1 TGATCTCA 4 280187 280194 - 4_280187_280194_- 0.61948053 0.629005347 0.624242938 0.006735051 Syt7 FBtr0089134 278683 280425 4 - 280152 280210 3'utr Syt7 FlyBase G56793.1 AAACATTGGCAGGACATGATCTCAAAGCCCAGACAAACTGTAGTACAATGGCATCGCTT 6 280194 0.899832612 3 6 26 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 4:280152-280210 8 Syt7 FBtr0089134 278683 280425 TGATCTCA 8mer-A1 dme-bantam-3p 4 - 280151 280210 3'utr Syt7 FlyBase G42902.1 AAACATTGGCAGGACATGATCTCAAAGCCCAGACAAACTGTAGTACAATGGCATCGCTTA 9 280194 0.942961179 4 9 40 1 1.041392685 0 0.111111111 0.272727273 9 0 0 11 4:280151-280210 8 5.5 3639 FBgn0039900 11 0.483333333 0.74 0.5 11.37931034 7.432432432 0 0 0 0.15 dme-miR-252-5p 6mer3-8 GTACTT 4 310320 310325 + 4_310320_310325_+ 0.999995923 0.999998146 0.999997035 1.56E-06 Rad23 FBtr0333679 310188 310822 4 + 310206 310340 3'utr Rad23 FlyBase G56282.1 AAGTTATGCAAATAACACCGGAAGCGTTACATTTAAAGTTAGATGTTCTTAAATTAAATGTAAAATGTCGATCATAAAAATTCTTTTATATTCTTTTAATACCGTCGGCGTATTGTACTTGTTATTTGTTAAAAA 38 310319 0.988544205 14 38 337 1 1.662757832 0.130434783 0.131578947 0.282608696 38 0 0 46 4:310206-310340 6 Rad23 FBtr0333679 310188 310822 GTACTT 6mer3-8 dme-miR-252-5p 4 + 310301 310341 3'utr Rad23 FlyBase G42496.1 TTAATACCGTCGGCGTATTGTACTTGTTATTTGTTAAAAAT 15 310319 0.735361194 6 12 167 0.866666667 0.937852093 0.033333333 0.733333333 0.866666667 15 2 2 26 4:310301-310341 6 19.5 3640 FBgn0026777 1534.613333 122.59 187.9666667 0.012706784 0.159066808 0.103741798 1 1 1 0.15 dme-miR-7-5p 6mer3-8 GTCTTC 4 310403 310408 + 4_310403_310408_+ 0.999469515 0.999949792 0.999709654 0.000339623 Rad23 FBtr0333679 310188 310822 4 + 310361 310454 3'utr Rad23 FlyBase G56283.1 GAGTTACGATGTCATTTTTACTAAATATTTCACCACGACATTGTCTTCAGCATAAGACTGCAAATGTCTACAAATTTATCTGTGCCAATCCATG 43 310401 0.978924784 10 43 294 1 1.69019608 0.020408163 0.139534884 0.244897959 43 0 0 49 4:310361-310454 6 Rad23 FBtr0333679 310188 310822 GTCTTC 6mer3-8 dme-miR-7-5p 4 + 310360 310429 3'utr Rad23 FlyBase G42497.1 AGAGTTACGATGTCATTTTTACTAAATATTTCACCACGACATTGTCTTCAGCATAAGACTGCAAATGTCT 40 310401 0.977940811 6 37 248 0.929824561 1.423245874 0.210526316 0.325 0.526315789 40 3 1 53 4:310360-310429 6 38 3641 FBgn0026777 1534.613333 122.59 187.9666667 0.024761938 0.309976344 0.202163504 2 2 2 0.15 dme-miR-304-5p 6mer2-7 GAGATT 4 311138 311143 - 4_311138_311143_- 1 0.999999989 0.999999994 0 Zip102B FBtr0089133|FBtr0340652|FBtr0340653|FBtr0333681 310928|310928|310928|310928 312789|312789|312789|312789 4 - 311063 311237 3'utr Zip102B FlyBase G56795.1 TAATTCTTGTGTCTTTGAATCTACATTGAGTCAGGAAAGATTTATAATTGTAGCAACATTATAGAGGGGACCATAGCCATACATGAAACTATTAGAGATTTATTAATATTAAAGTGTAGAATTCTTTGCATTAATAATGCATATTACAATGTTCGAGTTTTATATTTGTCGTATT 29 311157 0.989731084 11 23 231 0.84375 1.130333768 0.15625 0.103448276 0.1875 29 4 1 27 4:311063-311237 6 Zip102B FBtr0333681|FBtr0340653|FBtr0340652|FBtr0089133 310928|310928|310928|310928 312789|312789|312789|312789 GAGATT 6mer2-7 dme-miR-304-5p 4 - 311110 311180 3'utr Zip102B FlyBase G42903.1 ATTATAGAGGGGACCATAGCCATACATGAAACTATTAGAGATTTATTAATATTAAAGTGTAGAATTCTTTG 12 311153 0.980001397 8 11 84 0.8125 1.113943352 0.125 0.25 0.4375 12 3 0 13 4:311110-311180 6 9 3642 FBgn0039902 844.14 35.44333333 54.17 0.010661739 0.253926455 0.166143622 14 10 12 0.15 dme-bantam-3p 7mer-m8 TGATCTC 4 311832 311838 - 4_311832_311838_- 0.661608534 0.661610552 0.661609543 1.48E-06 Zip102B FBtr0089133|FBtr0340652|FBtr0340653|FBtr0333681 310928|310928|310928|310928 312789|312789|312789|312789 4 - 311805 311917 3'utr Zip102B FlyBase G56799.2 GTTTTTGACTATGACGAGTCTGCTGGCGAAATTCGGCGCCGACTTGCGTACTATTCCTTTTCGTTGCCATTCCGAAACCTGATCTCGATTCTCTTCTCCTTGGGCACAATCGA 142 311838 0.854386643 19 128 1086 0.890243902 1.01822482 0.164634146 0.11971831 0.237804878 142 5 13 146 4:311805-311917 7 Zip102B FBtr0333681|FBtr0340653|FBtr0340652|FBtr0089133 310928|310928|310928|310928 312789|312789|312789|312789 TGATCTC 7mer-m8 dme-bantam-3p 4 - 311809 311902 3'utr Zip102B FlyBase G42906.1 GAGTCTGCTGGCGAAATTCGGCGCCGACTTGCGTACTATTCCTTTTCGTTGCCATTCCGAAACCTGATCTCGATTCTCTTCTCCTTGGGCACAA 92 311838 0.98512193 12 85 691 0.907142857 1.404833717 0.114285714 0.391304348 0.6 92 9 4 127 4:311809-311902 7 107.5 3643 FBgn0039902 844.14 35.44333333 54.17 0.127348544 3.033010439 1.984493262 0 0 0 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT 4 312301 312307 - 4_312301_312307_- 0.577222728 0.586878242 0.582050485 0.00682747 Zip102B FBtr0089133|FBtr0340652|FBtr0340653|FBtr0333681 310928|310928|310928|310928 312789|312789|312789|312789 4 - 312266 312353 3'utr Zip102B FlyBase G56801.1 AGTTTACGTTCTCAGAATGGTAGTAAAAAGTAAGAGACGGTTTAAAGGCAGCTTGGCAATGTCACCATTGGTTTACTGGATAACGTCT 60 312300 0.962742996 10 59 297 0.969230769 1.799340549 0.307692308 0.083333333 0.153846154 60 2 0 63 4:312266-312353 7 Zip102B FBtr0333681|FBtr0340653|FBtr0340652|FBtr0089133 310928|310928|310928|310928 312789|312789|312789|312789 GGCAGCT 7mer-m8 dme-miR-980-3p 4 - 312249 312363 3'utr Zip102B FlyBase G42907.1 AACAATGGATAGTTTACGTTCTCAGAATGGTAGTAAAAAGTAAGAGACGGTTTAAAGGCAGCTTGGCAATGTCACCATTGGTTTACTGGATAACGTCTTCTGTTACGGCCTTAGA 56 312300 0.966890266 9 53 288 0.952380952 1.903089987 0.30952381 0.392857143 0.595238095 56 4 0 80 4:312249-312363 7 51.5 3644 FBgn0039902 844.14 35.44333333 54.17 0.061008837 1.453023606 0.950710725 -7 -7 -7 0.15 dme-miR-1006-3p 7mer-A1 GAATTTA 4 312652 312658 - 4_312652_312658_- 0.823348703 0.823073641 0.823211172 0.000194525 Zip102B FBtr0089133|FBtr0340652|FBtr0340653|FBtr0333681 310928|310928|310928|310928 312789|312789|312789|312789 4 - 312643 312758 3'utr Zip102B FlyBase G56804.1 AAGATGAAGTAAAAGTTAAGGGATATTAAGCTATAAATATATTGGGTTTAATTTCTCGGATATACAATTATTAACATTAAGTGCTTTGCACAAAGATTTTGAATTTAATGAATTGT 21 312660 0.855593012 12 20 169 0.965517241 1.146128036 0.172413793 0.285714286 0.482758621 21 0 1 28 4:312643-312758 7 Zip102B FBtr0333681|FBtr0340653|FBtr0340652|FBtr0089133 310928|310928|310928|310928 312789|312789|312789|312789 GAATTTA 7mer-A1 dme-miR-1006-3p 4 - 312632 312695 3'utr Zip102B FlyBase G42909.1 ACAATTATTAACATTAAGTGCTTTGCACAAAGATTTTGAATTTAATGAATTGTCGCATGAAAGT 16 312660 0.988502865 8 15 133 0.954545455 1.322219295 0.090909091 0.3125 0.5 16 1 0 21 4:312632-312695 7 10 3645 FBgn0039902 844.14 35.44333333 54.17 0.011846376 0.282140506 0.184604024 2 2 2 0.15 dme-miR-1003-3p 6mer2-7 TGTGAG 4 321250 321255 + 4_321250_321255_+ 0.95702917 0.966586218 0.961807694 0.00675782 CG32850 FBtr0089123 319798 321385 4 + 321235 321270 5'utr CG32850 FlyBase G56292.1 TTGTAAATTGTGACTTGTGAGCCAACCACATTAGCA 34 321249 0.730188489 6 33 222 0.973684211 1.568201724 0.315789474 0.117647059 0.210526316 34 1 0 37 4:321235-321270 6 CG32850 FBtr0089123 319798 321385 TGTGAG 6mer2-7 dme-miR-1003-3p 4 + 321236 321304 5'utr CG32850 FlyBase G42505.1 TGTAAATTGTGACTTGTGAGCCAACCACATTAGCACTATCAAATTTCCATGTCTCTGCCACTGAGTATA 23 321249 0.750036572 5 22 161 0.956521739 1.643452676 0.347826087 0.695652174 0.847826087 23 2 0 44 4:321236-321304 6 26 3646 FBgn0052850 7774.166667 410.5266667 632.2966667 0.00334441 0.063333279 0.041119938 1 1 1 0.15 dme-miR-1008-3p 8mer-A1 AGCTGTGA 4 329071 329078 - 4_329071_329078_- 0.613871694 0.636995384 0.625433539 0.016350925 PMCA FBtr0304046|FBtr0304049|FBtr0300555|FBtr0300554|FBtr0304047|FBtr0300557|FBtr0300556|FBtr0304048 328814|328814|328814|328814|328814|328814|328814|328191 329206|329206|331564|329206|329206|329206|329206|329206 4 - 329056 329094 3'utr PMCA FlyBase G56818.1 AGGATAACAGCAATGTAGCTGTGAATTGGTTAAAAAGCA 11 329080 0.762025845 4 10 69 1 1.176091259 0.2 0.272727273 0.466666667 11 0 0 15 4:329056-329094 8 PMCA FBtr0304047|FBtr0300554|FBtr0300556|FBtr0300557|FBtr0304048|FBtr0304046|FBtr0304049|FBtr0300555 328814|328814|328814|328814|328191|328814|328814|328814 329206|329206|329206|329206|329206|329206|329206|331564 AGCTGTGA 8mer-A1 dme-miR-1008-3p 4 - 329018 329110 3'utr PMCA FlyBase G42920.1 AAAAAAGGTTTTGTTCAGGATAACAGCAATGTAGCTGTGAATTGGTTAAAAAGCATTTTGTAATTCAGCAAAAATAATCCGTAAAAAAAATGT 11 329080 0.97955405 7 11 72 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 4:329018-329110 8 8.5 3647 FBgn0259214 5766.78 152.7933333 233.7433333 0.001473959 0.055630699 0.036364674 2 2 2 0.15 dme-miR-14-3p 6mer2-7 AGACTG 4 331503 331508 - 4_331503_331508_- 0.984228156 0.979049972 0.981639064 0.00366154 PMCA FBtr0300555|FBtr0304050|FBtr0300558 328814|329515|330854 331564|331564|331564 4 - 331448 331535 5'utr PMCA FlyBase G56825.1 TGGTTAAGCCTATAACAATTCCAAATTAGACTGGTTATGCTTCTCAAAGCGCAATCCCAAATCAATGGCCCAGCTCAATGTGGCTATT 446 331510 0.911479992 14 436 3056 0.978873239 2.1430148 0.001760563 0.210762332 0.38028169 446 9 3 556 4:331448-331535 6 PMCA FBtr0300558|FBtr0300555|FBtr0304050 330854|328814|329515 331564|331564|331564 AGACTG 6mer2-7 dme-miR-14-3p 4 - 331461 331609 stop_codon PMCA FlyBase G42928.1 ATCGAAACTAAACATTCCAATGGACAGAATGAGACTCGAATTTAAATGGTTTTAGTGGGTGTTTGCACCAAATATGGTTAAGCCTATAACAATTCCAAATTAGACTGGTTATGCTTCTCAAAGCGCAATCCCAAATCAATGGCCCAGCT 379 331510 0.972817175 14 369 2212 0.980506823 2.099507994 0.097465887 0.295514512 0.479532164 379 7 3 503 4:331461-331609 6 351 3648 FBgn0259214 5766.78 152.7933333 233.7433333 0.060865856 2.297220647 1.501647106 2 2 2 0.15 dme-miR-965-3p 6mer3-8 TACGCT 4 372497 372502 + 4_372497_372502_+ 0.999997175 0.999913768 0.999955472 5.90E-05 Hcf FBtr0334479|FBtr0345284|FBtr0089126|FBtr0089125|FBtr0307379 372391|372391|372391|372391|372391 372784|375554|372784|374973|372784 4 + 372451 372540 3'utr Hcf FlyBase G56327.1 AAAGTATGCTATTAGCTTTTCCGTTTTTACAGCTTCCAATAGACTTTACGCTGAATTCAAAATGATTACAACGAAACTTGAATATTATTG 56 372490 0.794175169 8 55 386 0.98630137 1.857332496 0.150684932 0.196428571 0.383561644 56 1 0 72 4:372451-372540 6 Hcf FBtr0089125|FBtr0307379|FBtr0345284|FBtr0089126|FBtr0334479 372391|372391|372391|372391|372391 374973|372784|375554|372784|372784 TACGCT 6mer3-8 dme-miR-965-3p 4 + 372476 372547 3'utr Hcf FlyBase G42525.1 TTTACAGCTTCCAATAGACTTTACGCTGAATTCAAAATGATTACAACGAAACTTGAATATTATTGCTATTAA 30 372491 0.980375031 7 28 199 0.956521739 1.643452676 0.152173913 0.333333333 0.565217391 30 2 0 44 4:372476-372547 6 38 3649 FBgn0039904 2694.423333 58.45333333 89.53333333 0.014103203 0.650091241 0.424422934 7 6 6.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 4 372718 372723 + 4_372718_372723_+ 0.999926036 0.99997302 0.999949528 3.32E-05 Hcf FBtr0334479|FBtr0345284|FBtr0089126|FBtr0089125|FBtr0307379 372391|372391|372391|372391|372391 372784|375554|372784|374973|372784 4 + 372677 372729 3'utr Hcf FlyBase G56329.1 AATAATATATAATATTTTCCTTATCATGAACTCTACAACACTCTAGTGTATAT 12 372704 0.984352927 6 10 84 0.9375 0.875061263 0 0.166666667 0.375 12 0 1 15 4:372677-372729 6 Hcf FBtr0089125|FBtr0307379|FBtr0345284|FBtr0089126|FBtr0334479 372391|372391|372391|372391|372391 374973|372784|375554|372784|372784 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 4 + 372687 372727 3'utr Hcf FlyBase G42527.1 AATATTTTCCTTATCATGAACTCTACAACACTCTAGTGTAT 5 372697 0.982720845 4 4 30 1 0.903089987 0 0.4 0.625 5 0 0 8 4:372687-372727 6 4.5 3650 FBgn0039904 2694.423333 58.45333333 89.53333333 0.001670116 0.076984489 0.050260611 14 21 17.5 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 4 437069 437074 - 4_437069_437074_- 0.99938319 0.99804358 0.998713385 0.00094724 lgs FBtr0089111 436955 437385 4 - 437049 437096 3'utr lgs FlyBase G56865.1 TTAATATGTGCGCTGCTCTCTCTGTGTTAAATGAAATTAAAATATATA 111 437076 0.982241423 10 106 967 0.95035461 1.649983544 0.517730496 0.216216216 0.382978723 111 5 2 134 4:437049-437096 6 lgs FBtr0089111 436955 437385 TGTGTT 6mer3-8 dme-miR-317-3p 4 - 437056 437094 3'utr lgs FlyBase G42953.1 AATATGTGCGCTGCTCTCTCTGTGTTAAATGAAATTAAA 77 437076 0.738180252 6 69 679 0.900826446 2.037426498 0.52892562 0.402597403 0.619834711 77 12 0 109 4:437056-437094 6 94 3651 FBgn0039907 1610.766667 36.50666667 56.17666667 0.058357304 2.574872169 1.673292589 2 2 2 0.15 dme-miR-252-5p 7mer-m1 TACTTAG 4 437288 437294 - 4_437288_437294_- 0.607858752 0.650154534 0.629006643 0.029907576 lgs FBtr0089111 436955 437385 4 - 437225 437302 3'utr lgs FlyBase G56867.1 AGCTTATTTACTTAGGTGTTTTTACAACGGAGAAAATAAACTTTTGGATATGCAAATGATAACGTTGGAAACAACATA 10 437291 0.984303858 4 10 81 1 1.079181246 0.333333333 0.2 0.333333333 10 0 0 12 4:437225-437302 7 lgs FBtr0089111 436955 437385 TACTTAG 7mer-m1 dme-miR-252-5p 4 - 437227 437306 3'utr lgs FlyBase G42954.1 TTGAAGCTTATTTACTTAGGTGTTTTTACAACGGAGAAAATAAACTTTTGGATATGCAAATGATAACGTTGGAAACAACA 16 437291 0.985303602 5 16 133 1 1.301029996 0.3 0.25 0.4 16 0 0 20 4:437227-437306 7 8.5 3652 FBgn0039907 1610.766667 36.50666667 56.17666667 0.00527699 0.232834186 0.151308372 -3 -3 -3 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 4 453270 453276 + 4_453270_453276_+ 0.66061659 0.656061355 0.658338972 0.003221013 CaMKI FBtr0089067|FBtr0333670|FBtr0089069|FBtr0089063|FBtr0089065 453198|453198|453198|453198|453198 453947|453947|453947|453947|453947 4 + 453246 453349 3'utr CaMKI FlyBase G56343.1 ACATTTTTGAATTTTAACAATTGTTCTAGTCTAGTAAATATCTCGTACTAACGAATCCGATATAATTTCTCAATCGAAAATGCCAATCAAATAACATATAATGT 32 453268 0.98966367 8 30 286 0.952380952 1.602059991 0.119047619 0.1875 0.380952381 32 2 0 40 4:453246-453349 7 CaMKI FBtr0089065|FBtr0089063|FBtr0089069|FBtr0333670|FBtr0089067 453198|453198|453198|453198|453198 453947|453947|453947|453947|453947 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 4 + 453254 453284 3'utr CaMKI FlyBase G42538.1 GAATTTTAACAATTGTTCTAGTCTAGTAAAT 9 453269 0.611747169 5 7 75 0.75 1.079181246 0.4375 0.444444444 0.6875 9 4 0 12 4:453254-453284 7 18 3653 FBgn0016126 937.6466667 46.26 70.96333333 0.019196997 0.389105058 0.253652121 2 1 1.5 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 4 453799 453804 + 4_453799_453804_+ 0.965350601 0.989462896 0.977406748 0.017049971 CaMKI FBtr0089067|FBtr0333670|FBtr0089069|FBtr0089063|FBtr0089065 453198|453198|453198|453198|453198 453947|453947|453947|453947|453947 4 + 453778 453827 3'utr CaMKI FlyBase G56346.1 TCTTAAGCAGATGATTTGGTGTTGACTGGAAATTTTTAGTATTAAGATGT 13 453799 0.963684023 8 9 124 0.75 0.602059991 0.25 0.153846154 0.3125 13 2 2 12 4:453778-453827 6 CaMKI FBtr0089065|FBtr0089063|FBtr0089069|FBtr0333670|FBtr0089067 453198|453198|453198|453198|453198 453947|453947|453947|453947|453947 TTGACT 6mer3-8 dme-miR-1012-3p 4 + 453782 453826 3'utr CaMKI FlyBase G42539.1 AAGCAGATGATTTGGTGTTGACTGGAAATTTTTAGTATTAAGATG 10 453797 0.643485661 7 9 99 0.944444444 1.230448921 0.388888889 0.5 0.722222222 10 1 0 17 4:453782-453826 6 10 3654 FBgn0016126 937.6466667 46.26 70.96333333 0.010664998 0.216169477 0.140917845 0 2 1 0.15 dme-bantam-3p 7mer-m8 TGATCTC 4 453914 453920 + 4_453914_453920_+ 0.616176816 0.610298732 0.613237774 0.004156444 CaMKI FBtr0089067|FBtr0333670|FBtr0089069|FBtr0089063|FBtr0089065 453198|453198|453198|453198|453198 453947|453947|453947|453947|453947 4 + 453875 453930 3'utr CaMKI FlyBase G56347.1 CTTTCTTGTAACAAATATATATATTAAACATCCCAAGCGTGATCTCCCCAAAGATT 32 453914 0.946817697 3 30 129 0.88372093 1.579783597 0.023255814 0.25 0.441860465 32 5 0 38 4:453875-453930 7 CaMKI FBtr0089065|FBtr0089063|FBtr0089069|FBtr0333670|FBtr0089067 453198|453198|453198|453198|453198 453947|453947|453947|453947|453947 TGATCTC 7mer-m8 dme-bantam-3p 4 + 453888 453934 3'utr CaMKI FlyBase G42540.1 AATATATATATTAAACATCCCAAGCGTGATCTCCCCAAAGATTATGT 24 453914 0.922171525 3 23 88 0.911764706 0.889301703 0.058823529 0.291666667 0.5 24 0 3 31 4:453888-453934 7 27 3655 FBgn0016126 937.6466667 46.26 70.96333333 0.028795495 0.583657588 0.380478181 0 0 0 0.15 dme-miR-980-3p 6mer3-8 GGCAGC 4 471331 471336 - 4_471331_471336_- 0.999915072 0.999966999 0.999941036 3.67E-05 Asator FBtr0332906|FBtr0300344|FBtr0332905|FBtr0300342 469407|471284|471284|471284 472288|474884|472288|472288 4 - 471315 471354 3'utr Asator FlyBase G56907.1 ATTTAAAAATAAAGCGTTGGCAGCGATTGTTCTTAAAAAC 8 471337 0.794746052 3 8 51 1 0.954242509 0 0.125 0.222222222 8 0 0 9 4:471315-471354 6 Asator FBtr0332905|FBtr0300342|FBtr0332906|FBtr0300344 471284|471284|469407|471284 472288|472288|472288|474884 GGCAGC 6mer3-8 dme-miR-980-3p 4 - 471313 471346 3'utr Asator FlyBase G42985.1 ATAAAGCGTTGGCAGCGATTGTTCTTAAAAACAA 5 471337 0.950841207 3 5 28 1 0.903089987 0 0.4 0.625 5 0 0 8 4:471313-471346 6 6.5 3656 FBgn0039908 319.3933333 7.256666667 11.06333333 0.020351082 0.895728066 0.587526363 1 1 1 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 4 471683 471690 - 4_471683_471690_- 0.499828076 0.499353752 0.499590914 0.000335381 Asator FBtr0332906|FBtr0300344|FBtr0332905|FBtr0300342 469407|471284|471284|471284 472288|474884|472288|472288 4 - 471673 471716 3'utr Asator FlyBase G56909.1 AAAGTCATGGATTATGACACATTGCTGTACTTAACTACATTTTT 30 471691 0.736390248 6 29 224 0.942857143 1.51851394 0.114285714 0.133333333 0.257142857 30 2 0 33 4:471673-471716 8 Asator FBtr0332905|FBtr0300342|FBtr0332906|FBtr0300344 471284|471284|469407|471284 472288|472288|472288|474884 GTACTTAA 8mer-A1 dme-miR-252-5p 4 - 471679 471714 3'utr Asator FlyBase G42987.1 AGTCATGGATTATGACACATTGCTGTACTTAACTAC 35 471691 0.747449474 4 32 276 0.909090909 1.22184875 0.072727273 0.342857143 0.581818182 35 3 2 50 4:471679-471714 8 31.5 3657 FBgn0039908 319.3933333 7.256666667 11.06333333 0.098624476 4.340836013 2.847243146 1 1 1 0.15 dme-bantam-3p 6mer3-8 TGATCT 4 537796 537801 + 4_537796_537801_+ 0.833915399 0.822025235 0.827970317 0.008407641 zfh2 FBtr0332913 536964 538373 4 + 537754 537819 3'utr zfh2 FlyBase G56438.1 ATCACCGGTAAGAGTTTCGGGAAGATACAAAAATCATCTACTTGATCTTATCTGTTGGTCAGATTA 31 537795 0.794894459 10 30 275 0.971428571 1.531478917 0.571428571 0.129032258 0.228571429 31 1 0 34 4:537754-537819 6 zfh2 FBtr0332913 536964 538373 TGATCT 6mer3-8 dme-bantam-3p 4 + 537768 537821 3'utr zfh2 FlyBase G42615.1 TTTCGGGAAGATACAAAAATCATCTACTTGATCTTATCTGTTGGTCAGATTAAA 19 537796 0.993000632 5 16 192 0.833333333 1.397940009 0.4 0.526315789 0.7 19 5 0 25 4:537768-537821 6 22 3658 FBgn0004607 3.003333333 0.04 0.056666667 7.325194229 550 388.2352941 1 0 0.5 0.15 dme-miR-276a-3p 7mer-A1 GTTCCTA 4 538876 538882 + 4_538876_538882_+ 0.729732789 0.762479465 0.746106127 0.023155414 zfh2 FBtr0307167|FBtr0089070 538553|538553 540874|539792 4 + 538832 539197 3'utr zfh2 FlyBase G56444.1 AACCTATTCCAACATTAGTAAGAATCTCTAAATTAAACGGAAGTGTTCCTAACTATTCGAAATATAAATTAGCAATAAACTTAAGGTATACACACTTGAGGCAATCCTTAACAATTCAAGATGGAGGGCGTTATCATGATAAGTTAAAATAACAAGTCGCTCCAAACAAAAATATGATATCATATAGATACATATATAATGAACTAGATTTAGTGAAATGTAAACTGAGTTCCTAGCATTTGATTGCTTTTGCCTTTGTTTTTATATTAGAATGTAGCCAATGAATACTAAGATCTGCTTCAGTATGCCGAATATAAAAGCTGAAATATATACATACGTGGTTCCTATTTTATTTAGAAACACTGT 507 538875 0.946271834 53 497 3521 0.982113821 2.303915684 0.045528455 0.169625247 0.315447154 507 9 2 604 4:538832-539197 7 zfh2 FBtr0307167|FBtr0089070 538553|538553 540874|539792 GTTCCTA 7mer-A1 dme-miR-276a-3p 4 + 538827 538902 3'utr zfh2 FlyBase G42622.1 GCGAAAACCTATTCCAACATTAGTAAGAATCTCTAAATTAAACGGAAGTGTTCCTAACTATTCGAAATATAAATTA 129 538875 0.976065097 6 128 822 0.994897959 2.290034611 0.005102041 0.356589147 0.576530612 129 1 0 195 4:538827-538902 7 206 3659 FBgn0004607 3.003333333 0.04 0.056666667 68.59045505 5150 3635.294118 1 1 1 0.15 dme-miR-970-3p 7mer-m8 TCTTATG 4 539232 539238 + 4_539232_539238_+ 0.657320206 0.64835483 0.652837518 0.006339495 zfh2 FBtr0307167|FBtr0089070 538553|538553 540874|539792 4 + 539221 539276 3'utr zfh2 FlyBase G56445.1 ATTTACGTCATTCTTATGGTGAGAGAATCGTGCCAATAATTTGTTCTGCAGAAAAT 20 539231 0.741441974 6 19 149 1 1.361727836 0.391304348 0.15 0.260869565 20 0 0 23 4:539221-539276 7 zfh2 FBtr0307167|FBtr0089070 538553|538553 540874|539792 TCTTATG 7mer-m8 dme-miR-970-3p 4 + 539221 539272 3'utr zfh2 FlyBase G42625.1 ATTTACGTCATTCTTATGGTGAGAGAATCGTGCCAATAATTTGTTCTGCAGA 6 539231 0.986592928 5 6 48 1 0.903089987 0.5 0.166666667 0.375 6 0 0 8 4:539221-539272 7 11 3660 FBgn0004607 3.003333333 0.04 0.056666667 3.662597114 275 194.1176471 1 1 1 0.15 dme-miR-13b-2-5p 6mer3-8 TTTGAC 4 539704 539709 + 4_539704_539709_+ 0.97574699 0.970146555 0.972946772 0.003960081 zfh2 FBtr0307167|FBtr0089070 538553|538553 540874|539792 4 + 539687 539733 3'utr zfh2 FlyBase G56447.1 TTTAAAAGAAAATAATATTTGACTGAAAATTAAAATATAAAAAAATT 89 539704 0.686349165 6 82 640 0.927272727 1.707570176 0 0.213483146 0.363636364 89 7 1 102 4:539687-539733 6 zfh2 FBtr0307167|FBtr0089070 538553|538553 540874|539792 TTTGAC 6mer3-8 dme-miR-13b-2-5p 4 + 539689 539736 3'utr zfh2 FlyBase G42627.1 TAAAAGAAAATAATATTTGACTGAAAATTAAAATATAAAAAAATTAAA 44 539704 0.660890058 7 42 323 0.936507937 1.293730757 0 0.318181818 0.523809524 44 2 2 59 4:539689-539736 6 66.5 3661 FBgn0004607 3.003333333 0.04 0.056666667 22.14206437 1662.5 1173.529412 0 0 0 0.15 dme-miR-276a-3p 8mer-A1 AGTTCCTA 4 539872 539879 + 4_539872_539879_+ 0.628944678 0.52285748 0.575901079 0.075014979 zfh2 FBtr0307167 538553 540874 4 + 539857 539918 3'utr zfh2 FlyBase G56448.1 AAGAATCTACTAAGAAGTTCCTATAGAATTTAATAAAAAGATATACAAATATATTTACGTGT 41 539863 0.8646097 9 24 357 0.565217391 0.812913357 0.065217391 0.12195122 0.217391304 41 17 3 26 4:539857-539918 8 zfh2 FBtr0307167 538553 540874 AGTTCCTA 8mer-A1 dme-miR-276a-3p 4 + 539858 539897 3'utr zfh2 FlyBase G42629.1 AGAATCTACTAAGAAGTTCCTATAGAATTTAATAAAAAGA 20 539864 0.804114552 8 17 157 0.88 0.865301426 0 0.2 0.36 20 1 2 22 4:539858-539897 8 29 3662 FBgn0004607 3.003333333 0.04 0.056666667 9.655937847 725 511.7647059 9 8 8.5 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 4 540045 540052 + 4_540045_540052_+ 0.498142036 0.496993656 0.497567846 0.000811971 zfh2 FBtr0307167 538553 540874 4 + 539988 540099 3'utr zfh2 FlyBase G56449.1 TGTAGAAATAATGTCATATATAAATATGTGAATGTTTGAAATCCCATTTAAATACATGTACTTAAGCCTTCACAATTGCCAACAAACACAGATATGGACAGAATACCATACT 64 540044 0.921574665 9 62 441 0.974025974 1.875061263 0.090909091 0.171875 0.311688312 64 2 0 75 4:539988-540099 8 zfh2 FBtr0307167 538553 540874 GTACTTAA 8mer-A1 dme-miR-252-5p 4 + 540027 540092 3'utr zfh2 FlyBase G42632.1 AATCCCATTTAAATACATGTACTTAAGCCTTCACAATTGCCAACAAACACAGATATGGACAGAATA 40 540044 0.890217003 5 38 232 0.920634921 1.161368002 0.015873016 0.4 0.619047619 40 2 3 58 4:540027-540092 8 42 3663 FBgn0004607 3.003333333 0.04 0.056666667 13.98446171 1050 741.1764706 1 1 1 0.15 dme-miR-184-3p 7mer-m8 TCCGTCC 4 542001 542007 - 4_542001_542007_- 0.661498996 0.661487309 0.661493153 8.27E-06 Thd1 FBtr0345197|FBtr0333706 538330|540558 545662|545662 4 - 541984 542027 3'utr Thd1 FlyBase G56931.1 ATCGAGTCGAACTGGCCATTTCCGTCCGTCTGAGGGCTCATCTT 36 542008 0.753355223 4 35 258 0.976190476 1.612783857 0.238095238 0.166666667 0.285714286 36 1 0 41 4:541984-542027 7 Thd1 FBtr0333706|FBtr0345197 540558|538330 545662|545662 TCCGTCC 7mer-m8 dme-miR-184-3p 4 - 541984 542025 3'utr Thd1 FlyBase G42999.1 CGAGTCGAACTGGCCATTTCCGTCCGTCTGAGGGCTCATCTT 22 542008 0.762194712 3 22 158 1 1.477121255 0.233333333 0.318181818 0.5 22 0 0 30 4:541984-542025 7 29 3664 FBgn0026869 3486.926667 66.67 102.3333333 0.008316779 0.434978251 0.283387622 1 1 1 0.15 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 4 544258 544264 - 4_544258_544264_- 0.783994457 0.822283856 0.803139156 0.027074694 Thd1 FBtr0345197|FBtr0333706 538330|540558 545662|545662 4 - 544236 544281 3'utr Thd1 FlyBase G56935.1 TTCAAATGCGTTTAGGTTACCTGAGCGTGTGAGTGTAATTTTTCTT 8 544265 0.974925753 2 8 71 1 1 0.4 0.25 0.4 8 0 0 10 4:544236-544281 7 Thd1 FBtr0333706|FBtr0345197 540558|538330 545662|545662 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 4 - 544227 544287 3'utr Thd1 FlyBase G43002.1 ACAAATTTCAAATGCGTTTAGGTTACCTGAGCGTGTGAGTGTAATTTTTCTTAATATCAAT 9 544265 0.989986283 6 8 77 0.9375 1.176091259 0.1875 0.444444444 0.6875 9 1 0 15 4:544227-544287 7 8 3665 FBgn0026869 3486.926667 66.67 102.3333333 0.002294284 0.119994 0.078175896 1 1 1 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA 4 545346 545353 - 4_545346_545353_- 0.50009916 0.500075696 0.500087428 1.66E-05 Thd1 FBtr0345197|FBtr0089106|FBtr0333706 538330|545266|540558 545662|545662|545662 4 - 545333 545368 3'utr Thd1 FlyBase G56939.2 CCGAAACAATTGTTTGTACTTAAATCATTTAAGCAT 53 545354 0.697814862 4 48 487 0.938461538 1.785329835 0.076923077 0.188679245 0.338461538 53 4 0 61 4:545333-545368 8 Thd1 FBtr0333706|FBtr0345197 540558|538330 545662|545662 GTACTTAA 8mer-A1 dme-miR-252-5p 4 - 545266 545372 3'utr Thd1 FlyBase G43004.1 GATCCCGAAACAATTGTTTGTACTTAAATCATTTAAGCATACTTTATTTTACTCACACACAAATATTGCGAAACTTACTAGTATATAATAAAGTTTTAAAATAATAA 41 545354 0.978728484 10 38 385 0.927272727 1.40654018 0.163636364 0.268292683 0.454545455 41 3 1 51 4:545266-545372 8 41.5 3666 FBgn0026869 3486.926667 66.67 102.3333333 0.011901598 0.622468877 0.405537459 1 1 1 0.15 dme-miR-2535b-3p 6mer3-8 CCGTGA 4 565765 565770 + 4_565765_565770_+ 0.997624134 0.983135738 0.990379936 0.010244846 Pur-alpha FBtr0310640|FBtr0089995|FBtr0089994|FBtr0310639|FBtr0089993|FBtr0310638|FBtr0089996 565755|565755|565755|565755|565755|565755|565755 567257|565931|565931|565931|567257|567257|565931 4 + 565741 565795 stop_codon Pur-alpha FlyBase G56460.2 AAATAGTCTTAAATAAACAACATACCGTGATTTACTAAGTTATATAAGAAGGCGC 93 565772 0.650600224 7 92 544 0.991304348 2.056904851 0 0.204301075 0.356521739 93 1 0 114 4:565741-565795 6 Pur-alpha FBtr0310639|FBtr0089994|FBtr0089995|FBtr0310640|FBtr0089996|FBtr0310638|FBtr0089993 565755|565755|565755|565755|565755|565755|565755 565931|565931|565931|567257|565931|567257|567257 CCGTGA 6mer3-8 dme-miR-2535b-3p 4 + 565683 565789 stop_codon Pur-alpha FlyBase G42638.1 AGAAAATGAAAAAATCGTCCGACTCAATTACTGCCGAAATTAACTTACCTACATCTTCAAATAGTCTTAAATAAACAACATACCGTGATTTACTAAGTTATATAAGA 93 565772 0.916697773 11 90 496 0.972972973 1.857332496 0.027027027 0.451612903 0.655405405 93 3 1 144 4:565683-565789 6 82 3667 FBgn0022361 255.0033333 15.47333333 23.55666667 0.321564424 5.299439897 3.480967879 -7 -7 -7 0.15 dme-miR-79-3p 6mer3-8 TAGCTT 4 566046 566051 + 4_566046_566051_+ 0.819628719 0.882949926 0.851289322 0.04477485 Pur-alpha FBtr0310640|FBtr0089993|FBtr0310638 565755|565755|565755 567257|567257|567257 4 + 565990 566065 3'utr Pur-alpha FlyBase G56462.1 AAATTAACTCTTAAAATCCATTTTGAACTCTAAATGTCCTTTTTTGGCTGGCTGTTTAGCTTCTACTTAGTGCAAG 98 566038 0.8410059 12 96 1031 0.982905983 2.06069784 0.094017094 0.183673469 0.316239316 98 2 0 115 4:565990-566065 6 Pur-alpha FBtr0310640|FBtr0310638|FBtr0089993 565755|565755|565755 567257|567257|567257 TAGCTT 6mer3-8 dme-miR-79-3p 4 + 565995 566070 3'utr Pur-alpha FlyBase G42640.1 AACTCTTAAAATCCATTTTGAACTCTAAATGTCCTTTTTTGGCTGGCTGTTTAGCTTCTACTTAGTGCAAGAAAAT 58 566038 0.825748127 14 55 566 0.964705882 1.612783857 0.164705882 0.310344828 0.529411765 58 2 1 82 4:565995-566070 6 59.5 3668 FBgn0022361 255.0033333 15.47333333 23.55666667 0.233330283 3.845325291 2.525824254 8 8 8 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 4 566727 566732 + 4_566727_566732_+ 0.730949137 0.7309494 0.730949268 2.12E-07 Pur-alpha FBtr0310640|FBtr0310640|FBtr0310640|FBtr0089993|FBtr0089993|FBtr0089993|FBtr0310638|FBtr0310638|FBtr0310638 565755|565755|565755|565755|565755|565755|565755|565755|565755 567257|567257|567257|567257|567257|567257|567257|567257|567257 4 + 566697 566788 3'utr Pur-alpha FlyBase G56466.1 CCTAAACTCGTTTTTAAAACAAAAGTTTCATGTGATCACGTAGAATAAAAACTTACTAAGTACGATGAACATGCATAGCAAAATAACAACAT 166 566724 0.92125605 13 145 1139 0.875 1.604765885 0.130434783 0.096385542 0.184782609 166 20 3 161 4:566697-566788 6 Pur-alpha FBtr0310640|FBtr0310640|FBtr0310640|FBtr0310638|FBtr0310638|FBtr0310638|FBtr0089993|FBtr0089993|FBtr0089993 565755|565755|565755|565755|565755|565755|565755|565755|565755 567257|567257|567257|567257|567257|567257|567257|567257|567257 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 4 + 566700 566766 3'utr Pur-alpha FlyBase G42642.1 AAACTCGTTTTTAAAACAAAAGTTTCATGTGATCACGTAGAATAAAAACTTACTAAGTACGATGAAC 99 566724 0.98569285 7 79 673 0.817567568 1.605664116 0.101351351 0.333333333 0.554054054 99 25 2 121 4:566700-566766 6 124.5 3669 FBgn0022361 255.0033333 15.47333333 23.55666667 0.488228912 8.046100819 5.28512806 3 3 3 0.15 dme-miR-1006-3p 6mer2-7 GAATTT 4 566909 566914 + 4_566909_566914_+ 0.906621857 0.998779304 0.95270058 0.065165122 Pur-alpha FBtr0310640|FBtr0089993|FBtr0310638 565755|565755|565755 567257|567257|567257 4 + 566864 566931 3'utr Pur-alpha FlyBase G56467.1 AGTAATAAATTAGCTGTACTAATTATTAAGTATTGAAATTTATCAGAATTTGGGTTCAATAAAGAGAG 6 566913 0.978086135 2 6 48 1 0.77815125 0.5 0 0 6 0 0 6 4:566864-566931 6 Pur-alpha FBtr0310640|FBtr0310638|FBtr0089993 565755|565755|565755 567257|567257|567257 GAATTT 6mer2-7 dme-miR-1006-3p 4 + 566896 566932 3'utr Pur-alpha FlyBase G42643.1 TTGAAATTTATCAGAATTTGGGTTCAATAAAGAGAGA 5 566917 0.970693568 2 5 34 1 0.903089987 0.125 0.4 0.625 5 0 0 8 4:566896-566932 6 5 3670 FBgn0022361 255.0033333 15.47333333 23.55666667 0.019607587 0.323136579 0.212254139 -4 -8 -6 0.15 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 4 577873 577879 + 4_577873_577879_+ 0.823348829 0.823287929 0.823318379 4.31E-05 Ephrin FBtr0089076|FBtr0089077|FBtr0089075 577321|577321|577321 578143|580122|578143 4 + 577861 577903 3'utr Ephrin FlyBase G56490.1 CAGCTATATTTTTACCTGACTTCGCGTCTATTAGCTAAAATGA 8 577871 0.868935113 4 6 55 0.777777778 0.84509804 0.222222222 0.125 0.222222222 8 2 0 7 4:577861-577903 7 Ephrin FBtr0089077|FBtr0089075|FBtr0089076 577321|577321|577321 580122|578143|578143 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 4 + 577860 577890 3'utr Ephrin FlyBase G42658.1 ACAGCTATATTTTTACCTGACTTCGCGTCTA 7 577871 0.675684281 2 7 63 1 1.146128036 0 0.714285714 0.857142857 7 0 0 14 4:577860-577890 7 6.5 3671 FBgn0040324 1976.393333 63.49666667 97.38666667 0.003288819 0.102367578 0.06674425 2 2 2 0.15 dme-miR-8-3p 6mer3-8 CAGTAT 4 578372 578377 + 4_578372_578377_+ 0.999395735 0.999758376 0.999577056 0.000256468 Ephrin FBtr0089077 577321 580122 4 + 578347 578395 3'utr Ephrin FlyBase G56494.1 AATTTTATTTTGTAAATGAACCAAGCAGTATAGAGAAGTGATTCTTAAC 21 578390 0.738015224 8 18 127 0.88 1.342422681 0.24 0.19047619 0.32 21 3 0 22 4:578347-578395 6 Ephrin FBtr0089077 577321 580122 CAGTAT 6mer3-8 dme-miR-8-3p 4 + 578347 578395 3'utr Ephrin FlyBase G42661.1 AATTTTATTTTGTAAATGAACCAAGCAGTATAGAGAAGTGATTCTTAAC 22 578390 0.95241322 6 18 111 0.857142857 1.477121255 0.114285714 0.409090909 0.628571429 22 5 0 30 4:578347-578395 6 21.5 3672 FBgn0040324 1976.393333 63.49666667 97.38666667 0.010878401 0.338600451 0.220769441 -18 -18 -18 0.15 dme-miR-932-5p 6mer3-8 GGAATT 4 620290 620295 + 4_620290_620295_+ 1 0.999995805 0.999997902 2.97E-06 Eph FBtr0301285 620104 620734 4 + 620268 620360 5'utr Eph FlyBase G56526.1 AGCTCAACAACTTTCGGACATGGGAATTACTTTAGTTGGACATCAAAAAAAGATCTTACATCAAGCCCGGCAACTCGACACTATAATATAAAC 25 620296 0.886773682 11 19 138 0.709677419 1.342422681 0.322580645 0.2 0.35483871 25 9 0 22 4:620268-620360 6 Eph FBtr0301285 620104 620734 GGAATT 6mer3-8 dme-miR-932-5p 4 + 620260 620360 5'utr Eph FlyBase G42685.1 AGGTTAACAGCTCAACAACTTTCGGACATGGGAATTACTTTAGTTGGACATCAAAAAAAGATCTTACATCAAGCCCGGCAACTCGACACTATAATATAAAC 16 620303 0.958889895 11 14 70 0.913043478 1.021189299 0.260869565 0.375 0.565217391 16 1 1 21 4:620260-620360 6 5.5 3673 FBgn0025936 2044.833333 61.14666667 93.30666667 0.002689706 0.089947667 0.058945413 -6 -13 -9.5 0.15 dme-miR-307a-3p 7mer-A1 GTTGTGA 4 620793 620799 + 4_620793_620799_+ 0.686894091 0.67732144 0.682107766 0.006768921 Eph FBtr0089086|FBtr0089082|FBtr0089084|FBtr0089083 620357|620357|620357|620357 622470|620926|620926|620926 4 + 620680 620838 3'utr Eph FlyBase G56528.1 TATACCTTATATATCAATGTGTACCAATTATTTATTATACGAACAATTTTCAAGCTTATTATTATAAGAGTTTAGAGGCGCTATGATTGCCTTGCTATATTTTACCTTTTTTTGTTGTGATAGAAGTGGAATTAAAGAACTATTCATCTTTATTAGATT 190 620793 0.822310191 33 182 2146 0.960352423 1.639486489 0.383259912 0.163157895 0.299559471 190 5 4 218 4:620680-620838 7 Eph FBtr0089084|FBtr0089083|FBtr0089082|FBtr0089086 620357|620357|620357|620357 620926|620926|620926|622470 GTTGTGA 7mer-A1 dme-miR-307a-3p 4 + 620717 620882 3'utr Eph FlyBase G42688.1 TACGAACAATTTTCAAGCTTATTATTATAAGAGTTTAGAGGCGCTATGATTGCCTTGCTATATTTTACCTTTTTTTGTTGTGATAGAAGTGGAATTAAAGAACTATTCATCTTTATTAGATTATATTTCATGGTTTACTTTGCATAAAATAGTGAAAAACTCAATA 101 620793 0.992723967 25 93 1080 0.925170068 1.531478917 0.31292517 0.326732673 0.537414966 101 8 3 136 4:620717-620882 7 103 3674 FBgn0025936 2044.833333 61.14666667 93.30666667 0.050370853 1.684474488 1.103886825 0 0 0 0.15 dme-miR-1006-3p 7mer-A1 GAATTTA 4 649288 649294 - 4_649288_649294_- 0.823349531 0.553011186 0.688180358 0.191158045 gw FBtr0310542 649039 650256 4 - 649283 649330 3'utr gw FlyBase G57000.1 TAGTAAAACCAAGTGATTTAAAAAGAACGTGTATCTGAATTTATTACA 7 649301 0.96727051 5 6 33 1 0.903089987 0 0.142857143 0.25 7 0 0 8 4:649283-649330 7 gw FBtr0310542 649039 650256 GAATTTA 7mer-A1 dme-miR-1006-3p 4 - 649288 649316 3'utr gw FlyBase G43059.1 GATTTAAAAAGAACGTGTATCTGAATTTA 5 649301 0.973742539 2 5 28 1 0.698970004 0.2 0 0 5 0 0 5 4:649288-649316 6 3.5 3675 FBgn0051992 3462.52 78.52666667 120.4066667 0.001010824 0.044570846 0.029068158 7 7 7 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 4 649519 649524 - 4_649519_649524_- 0.961030555 0.96432068 0.962675618 0.002326452 gw FBtr0310542 649039 650256 4 - 649483 649548 3'utr gw FlyBase G57001.1 TGTTTCCAGTAAGGAAAAAATACCTGTGTTATATTCATTAGAGGAAGTTGTAATCGTATTACGGTT 29 649517 0.804503373 10 24 239 0.78125 1.397940009 0.09375 0.103448276 0.1875 29 7 0 25 4:649483-649548 6 gw FBtr0310542 649039 650256 TGTGTT 6mer3-8 dme-miR-317-3p 4 - 649443 649549 3'utr gw FlyBase G43060.1 GTGTTTCCAGTAAGGAAAAAATACCTGTGTTATATTCATTAGAGGAAGTTGTAATCGTATTACGGTTTTGCTTTCATCAAAGCATTCCCACCGAAAAAGTTCGGCTA 26 649520 0.982673745 10 23 181 0.852941176 1.462397998 0.323529412 0.269230769 0.441176471 26 5 0 29 4:649443-649549 6 20.5 3676 FBgn0051992 3462.52 78.52666667 120.4066667 0.005920543 0.261057815 0.170256353 -7 -4 -5.5 0.15 dme-miR-1012-3p 6mer3-8 TTGACT 4 649896 649901 - 4_649896_649901_- 0.937212082 0.886245511 0.911728797 0.036038828 gw FBtr0310542 649039 650256 4 - 649819 649957 3'utr gw FlyBase G57003.1 AAAAAAAAAATGGCATGCTTGATGGTTTGCAAACCTTCCTATTTAAGTAAAGTGTTTTGACTCTGGCTCCCAAAGCTTTCCTTGGGAAACGGGAAAAATTCTCTACAGTGTATATGTGCGCATGCAAACTCATTTGGTA 67 649894 0.907529511 21 67 444 1 1.903089987 0.2625 0.164179104 0.3 67 0 0 80 4:649819-649957 6 gw FBtr0310542 649039 650256 TTGACT 6mer3-8 dme-miR-1012-3p 4 - 649796 649913 3'utr gw FlyBase G43062.1 AAGTAAAGTGTTTTGACTCTGGCTCCCAAAGCTTTCCTTGGGAAACGGGAAAAATTCTCTACAGTGTATATGTGCGCATGCAAACTCATTTGGTAAATTACACATTAATAAATATGTA 45 649894 0.982177047 16 42 311 0.927536232 1.806179974 0.202898551 0.422222222 0.623188406 45 5 0 64 4:649796-649913 6 30 3677 FBgn0051992 3462.52 78.52666667 120.4066667 0.00866421 0.382035826 0.249155639 -7 -7 -7 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 4 686100 686106 + 4_686100_686106_+ 0.661381758 0.661367891 0.661374824 9.83E-06 CG11360 FBtr0089091|FBtr0310540|FBtr0310539|FBtr0310541 686039|686039|686039|686039 689595|687565|690650|687565 4 + 686071 686152 3'utr CG11360 FlyBase G56563.1 TTGTTAGTTTTTAGTTAGTCGGTTACACATCTAGTCGTGGCTTCCGTGAAGTCTATTAACATTAGTTGAACGTTCAGGGATT 96 686100 0.980332826 14 94 780 0.983606557 1.77815125 0.319672131 0.197916667 0.368852459 96 1 1 120 4:686071-686152 7 CG11360 FBtr0310541|FBtr0310539|FBtr0310540|FBtr0089091 686039|686039|686039|686039 687565|690650|687565|689595 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 4 + 686071 686152 3'utr CG11360 FlyBase G42715.1 TTGTTAGTTTTTAGTTAGTCGGTTACACATCTAGTCGTGGCTTCCGTGAAGTCTATTAACATTAGTTGAACGTTCAGGGATT 63 686100 0.760560493 11 60 483 0.968421053 1.662757832 0.442105263 0.380952381 0.589473684 63 2 1 92 4:686071-686152 7 66 3678 FBgn0039920 1210.836667 29.66666667 45.19333333 0.054507765 2.224719101 1.460392388 0 0 0 0.15 dme-miR-317-3p 6mer3-8 TGTGTT 4 687363 687368 + 4_687363_687368_+ 0.999999993 0.999999993 0.999999993 0 CG11360 FBtr0089091|FBtr0310540|FBtr0310539|FBtr0310541 686039|686039|686039|686039 689595|687565|690650|687565 4 + 687347 687383 3'utr CG11360 FlyBase G56564.1 GATATAAAAATTTTTCTGTGTTTTAGGAAGTCATCTA 16 687360 0.697213565 7 14 171 0.9 1.255272505 0.25 0.1875 0.35 16 2 0 18 4:687347-687383 6 CG11360 FBtr0310541|FBtr0310539|FBtr0310540|FBtr0089091 686039|686039|686039|686039 687565|690650|687565|689595 TGTGTT 6mer3-8 dme-miR-317-3p 4 + 687339 687385 3'utr CG11360 FlyBase G42717.1 GAATAGCGGATATAAAAATTTTTCTGTGTTTTAGGAAGTCATCTATA 10 687361 0.988469687 4 8 110 0.727272727 0.602059991 0.454545455 0.1 0.181818182 10 2 1 8 4:687339-687385 6 13 3679 FBgn0039920 1210.836667 29.66666667 45.19333333 0.010736378 0.438202247 0.287653046 3 2 2.5 0.15 dme-miR-2b-2-5p 7mer-A1 TGAAGAA 4 687457 687463 + 4_687457_687463_+ 0.821651956 0.822476581 0.822064268 0.00058308 CG11360 FBtr0089091|FBtr0310540|FBtr0310539|FBtr0310541 686039|686039|686039|686039 689595|687565|690650|687565 4 + 687421 687474 3'utr CG11360 FlyBase G56565.1 AAGTAGAACAAACCCAAATTCTATTGAAGACCTTAGTGAAGAATTTTAATAGTG 11 687454 0.976640334 6 11 74 1 1.146128036 0.071428571 0.272727273 0.428571429 11 0 0 14 4:687421-687474 7 CG11360 FBtr0310541|FBtr0310539|FBtr0310540|FBtr0089091 686039|686039|686039|686039 687565|690650|687565|689595 TGAAGAA 7mer-A1 dme-miR-2b-2-5p 4 + 687424 687470 3'utr CG11360 FlyBase G42718.1 TAGAACAAACCCAAATTCTATTGAAGACCTTAGTGAAGAATTTTAAT 7 687465 0.969190367 6 7 42 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 4:687424-687470 7 7.5 3680 FBgn0039920 1210.836667 29.66666667 45.19333333 0.006194064 0.252808989 0.16595368 3 -8 -2.5 0.15 dme-bantam-3p 6mer3-8 TGATCT 4 688446 688451 + 4_688446_688451_+ 0.991567412 0.999993215 0.995780314 0.00595794 CG11360 FBtr0089091|FBtr0310539 686039|686039 689595|690650 4 + 688427 688467 3'utr CG11360 FlyBase G56567.1 GTTGACGTTGTGAAATTCCTGATCTGTTATAAAACTTTAAA 18 688453 0.684799664 7 16 154 0.954545455 1.322219295 0.045454545 0.111111111 0.272727273 18 1 0 21 4:688427-688467 6 CG11360 FBtr0310539|FBtr0089091 686039|686039 690650|689595 TGATCT 6mer3-8 dme-bantam-3p 4 + 688427 688458 3'utr CG11360 FlyBase G42719.1 GTTGACGTTGTGAAATTCCTGATCTGTTATAA 6 688454 0.887859386 4 6 52 1 1 0 0.333333333 0.6 6 0 0 10 4:688427-688458 6 11.5 3681 FBgn0039920 1210.836667 29.66666667 45.19333333 0.009497565 0.387640449 0.25446231 -7 -8 -7.5 0.15 dme-miR-184-5p 6mer3-8 TGATAA 4 688895 688900 + 4_688895_688900_+ 0.994552816 0.89366183 0.944107323 0.07134071 CG11360 FBtr0089091|FBtr0310539 686039|686039 689595|690650 4 + 688857 688947 3'utr CG11360 FlyBase G56569.1 ACTTTATGATACTAATTCTCTGAAAAATTTAAAACGACTGATAAATTAGCATAAATATTAAGATCGGACACAATATATATATACATAAATA 41 688902 0.791741347 7 35 301 0.840909091 1.568201724 0.045454545 0.073170732 0.136363636 41 7 0 37 4:688857-688947 6 CG11360 FBtr0310539|FBtr0089091 686039|686039 690650|689595 TGATAA 6mer3-8 dme-miR-184-5p 4 + 688804 688914 3'utr CG11360 FlyBase G42720.1 ATTTATTTTTAAACAACAAACATGATGAAAAATATATTGTATCTATAAAGTAAACTTTATGATACTAATTCTCTGAAAAATTTAAAACGACTGATAAATTAGCATAAATAT 29 688884 0.987200865 11 24 211 0.880952381 1.568201724 0.071428571 0.344827586 0.547619048 29 5 0 37 4:688804-688914 6 27 3682 FBgn0039920 1210.836667 29.66666667 45.19333333 0.022298631 0.91011236 0.59743325 -7 11 2 0.15 dme-miR-282-5p 7mer-m8 AGAGGCT 4 689247 689253 + 4_689247_689253_+ 0.623020872 0.629294115 0.626157493 0.004435822 CG11360 FBtr0089091|FBtr0310539 686039|686039 689595|690650 4 + 689178 689278 3'utr CG11360 FlyBase G56572.1 TGTTATACCTGTGTTTTAAAATTGTGTACTGTGCTTCAAGGTTAAATGAATCAATCGAAAATTTGTAATAGAGGCTGGCTTATATATATTTAAATGTATAA 64 689246 0.987691718 10 62 557 0.972972973 1.857332496 0.081081081 0.15625 0.27027027 64 2 0 72 4:689178-689278 7 CG11360 FBtr0310539|FBtr0089091 686039|686039 690650|689595 AGAGGCT 7mer-m8 dme-miR-282-5p 4 + 689229 689273 3'utr CG11360 FlyBase G42724.1 CAATCGAAAATTTGTAATAGAGGCTGGCTTATATATATTTAAATG 30 689246 0.875599858 5 30 230 1 1.653212514 0.022222222 0.4 0.6 30 0 0 45 4:689229-689273 7 42.5 3683 FBgn0039920 1210.836667 29.66666667 45.19333333 0.035099697 1.43258427 0.940404189 1 1 1 0.15 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 4 689631 689637 + 4_689631_689637_+ 0.620171518 0.620197544 0.620184531 1.84E-05 CG11360 FBtr0310539 686039 690650 4 + 689612 689657 3'utr CG11360 FlyBase G56576.1 TTAAATAAAACGGTATCTATGGTGCTTATAACAAACTTGAACCATA 36 689631 0.773776222 2 36 292 1 1.633468456 0 0.194444444 0.325581395 36 0 0 43 4:689612-689657 7 CG11360 FBtr0310539 686039 690650 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 4 + 689615 689651 3'utr CG11360 FlyBase G42727.1 AATAAAACGGTATCTATGGTGCTTATAACAAACTTGA 18 689631 0.723881904 5 17 132 0.964285714 1.431363764 0.071428571 0.388888889 0.607142857 18 1 0 27 4:689615-689651 7 26.5 3684 FBgn0039920 1210.836667 29.66666667 45.19333333 0.021885693 0.893258427 0.586369671 0 0 0 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC 4 690436 690442 + 4_690436_690442_+ 0.657779839 0.652102945 0.654941392 0.004014174 CG11360 FBtr0310539 686039 690650 4 + 690417 690460 3'utr CG11360 FlyBase G56578.1 AATATGAAAATATCCGTATTGTGTTCGACAAAAAGTAATATATC 19 690435 0.981184139 4 19 141 1 1.361727836 0 0.210526316 0.347826087 19 0 0 23 4:690417-690460 7 CG11360 FBtr0310539 686039 690650 TGTGTTC 7mer-m8 dme-miR-317-3p 4 + 690420 690448 3'utr CG11360 FlyBase G42729.1 ATGAAAATATCCGTATTGTGTTCGACAAA 11 690435 0.701129252 2 11 78 1 1.230448921 0 0.545454545 0.705882353 11 0 0 17 4:690420-690448 7 15 3685 FBgn0039920 1210.836667 29.66666667 45.19333333 0.012388128 0.505617978 0.331907361 1 1 1 0.15 dme-miR-263a-5p 6mer3-8 GTGCCA 4 691089 691094 - 4_691089_691094_- 0.958077465 0.999964913 0.979021189 0.029618865 myo FBtr0089095 690684 691990 4 - 690983 691145 3'utr myo FlyBase G57048.1 TGAAACTTATTCCGATTAGTTCCTACGATATAAGCTCGAATGCTTGGTTGAGTGCCAAAAAGAACTTATTTTTCTTATGCGTTATTTTCGAATCTTCTATTAACACTACTTGTCGCAGGATTGGCTTCTAAACGTTTGCAAGAGTACTTAGGAGTTGTCAATA 16 691100 0.983782635 12 16 133 1 1.204119983 0.1875 0 0 16 0 0 16 4:690983-691145 6 myo FBtr0089095 690684 691990 GTGCCA 6mer3-8 dme-miR-263a-5p 4 - 691074 691141 3'utr myo FlyBase G43111.1 ACTTATTCCGATTAGTTCCTACGATATAAGCTCGAATGCTTGGTTGAGTGCCAAAAAGAACTTATTTT 9 691094 0.972382134 7 8 55 1 1.079181246 0.416666667 0.222222222 0.416666667 9 0 0 12 4:691074-691141 6 5 3686 FBgn0026199 2431.316667 94.48333333 145.4933333 0.002056499 0.052919386 0.034365836 6 0 3 0.15 dme-miR-283-5p 6mer3-8 TGATAT 4 855396 855401 - 4_855396_855401_- 0.851436023 0.999970419 0.925703221 0.105029681 CG11148 FBtr0300886 853714 855509 4 - 855380 855469 5'utr CG11148 FlyBase G57100.1 AAATTTAAAATGTTATGAACTGCAGAATTGAAATAAACTTAGGTCACAAGATTATGTGCGTTAAACTCTGATATACCTAAATAAATATAT 32 855398 0.750894564 14 29 228 0.930232558 1.124938737 0.186046512 0.28125 0.465116279 32 1 2 40 4:855380-855469 6 CG11148 FBtr0300886 853714 855509 TGATAT 6mer3-8 dme-miR-283-5p 4 - 855379 855432 5'utr CG11148 FlyBase G43148.1 CTTAGGTCACAAGATTATGTGCGTTAAACTCTGATATACCTAAATAAATATATA 12 855400 0.985337594 5 9 89 0.666666667 1.079181246 0.111111111 0.25 0.5 12 6 0 12 4:855379-855432 6 13.5 3687 FBgn0039936 3661.476667 89.62 137.45 0.003687037 0.150636019 0.098217534 -3 -1 -2 0.15 dme-bantam-3p 7mer-m8 TGATCTC X 10077302 10077308 - X_10077302_10077308_- 0.661611411 0.66161432 0.661612866 2.05E-06 ZAP3 FBtr0308584 10077004 10077349 X - 10077244 10077335 5'utr ZAP3 FlyBase G66210.1 GGCAGCAGCAGCGCAGGACCTGATCTTTGATCTCTGAACTCTGAACTCTGAACTCTGAACTCTGAACTCTGAACTCTGAACTCTGAACTCTG 90 10077301 0.988264536 8 82 753 0.902912621 1.366422957 0.233009709 0.133333333 0.242718447 90 7 3 93 X:10077244-10077335 7 ZAP3 FBtr0308584 10077004 10077349 TGATCTC 7mer-m8 dme-bantam-3p X - 10077278 10077335 5'utr ZAP3 FlyBase G49842.1 GGCAGCAGCAGCGCAGGACCTGATCTTTGATCTCTGAACTCTGAACTCTGAACTCTGA 70 10077301 0.986149418 6 66 555 0.944444444 1.309630167 0.175925926 0.4 0.611111111 70 2 4 102 X:10077278-10077335 7 79 3688 FBgn0052685 2208 46.58 71.55666667 0.035778986 1.69600687 1.104020124 -7 -7 -7 0.15 dme-miR-14-3p 6mer3-8 AAGACT X 10264306 10264311 - X_10264306_10264311_- 0.999999362 0.999429129 0.999714246 0.000403263 CG12643 FBtr0071481 10264231 10264840 X - 10264283 10264332 3'utr CG12643 FlyBase G66241.1 TTTAATTTGTATTTAGAGCTAAAGACTACAGTTTATACATTTTATGAATT 22 10264313 0.844661757 7 20 173 0.884615385 1.361727836 0.230769231 0.181818182 0.307692308 22 3 0 23 X:10264283-10264332 6 CG12643 FBtr0071481 10264231 10264840 AAGACT 6mer3-8 dme-miR-14-3p X - 10264282 10264337 3'utr CG12643 FlyBase G49865.1 ACGTATTTAATTTGTATTTAGAGCTAAAGACTACAGTTTATACATTTTATGAATTT 14 10264322 0.82261246 7 13 146 0.9 1.255272505 0.15 0.428571429 0.6 14 2 0 18 X:10264282-10264337 6 17 3689 FBgn0040942 927.6666667 110.47 167.3433333 0.018325548 0.153887933 0.101587555 2 11 6.5 0.15 dme-miR-79-3p 6mer3-8 TAGCTT X 10276709 10276714 - X_10276709_10276714_- 0.659464918 0.506965571 0.583215244 0.107833289 alpha-Man-I FBtr0300512|FBtr0300514|FBtr0299633|FBtr0300513|FBtr0299632|FBtr0300516|FBtr0300515|FBtr0300511|FBtr0331759 10266790|10276053|10276053|10276053|10276616|10276053|10276053|10266790|10276616 10277555|10277555|10277555|10277555|10277555|10277555|10277555|10277555|10277555 X - 10276649 10276741 3'utr alpha-Man-I FlyBase G66249.1 ATTTAAATATAAATCTAATATAGAGTCTAGCTTACTGTATGTGACGAAAGAAATGTAACGCAAATTACCTTAAATCGAGAACATCAAGCGAAA 76 10276706 0.866758461 6 76 513 1 1.986771734 0.051546392 0.236842105 0.402061856 76 0 0 97 X:10276649-10276741 6 alpha-Man-I FBtr0300515|FBtr0331759|FBtr0300511|FBtr0299632|FBtr0300516|FBtr0299633|FBtr0300513|FBtr0300512|FBtr0300514 10276053|10276616|10266790|10276616|10276053|10276053|10276053|10266790|10276053 10277555|10277555|10277555|10277555|10277555|10277555|10277555|10277555|10277555 TAGCTT 6mer3-8 dme-miR-79-3p X - 10276664 10276732 3'utr alpha-Man-I FlyBase G49874.1 TAAATCTAATATAGAGTCTAGCTTACTGTATGTGACGAAAGAAATGTAACGCAAATTACCTTAAATCGA 43 10276706 0.856815318 4 42 273 0.964912281 1.740362689 0.175438596 0.209302326 0.403508772 43 2 0 55 X:10276664-10276732 6 39.5 3690 FBgn0259170 1144.146667 34.71333333 53.02333333 0.034523546 1.1378913 0.744955051 -8 -8 -8 0.15 dme-miR-283-5p 8mer-A1 TGATATTA X 10277097 10277104 - X_10277097_10277104_- 0.59098802 0.590499138 0.590743579 0.000345705 alpha-Man-I FBtr0300512|FBtr0300514|FBtr0299633|FBtr0300513|FBtr0299632|FBtr0300516|FBtr0300515|FBtr0300511|FBtr0331759 10266790|10276053|10276053|10276053|10276616|10276053|10276053|10266790|10276616 10277555|10277555|10277555|10277555|10277555|10277555|10277555|10277555|10277555 X - 10277083 10277189 3'utr alpha-Man-I FlyBase G66252.1 AATCCAAATAGTTGACAGAGGTGGATGGTGGGAAGACCTCAATTTCCATTTAAATGCGAATGACGTAGACGTAGGCAAAAACTCTTGATATTAATTATGATATGATA 53 10277105 0.857335094 9 52 380 0.982758621 1.755874856 0.25862069 0.094339623 0.172413793 53 1 0 57 X:10277083-10277189 8 alpha-Man-I FBtr0300515|FBtr0331759|FBtr0300511|FBtr0299632|FBtr0300516|FBtr0299633|FBtr0300513|FBtr0300512|FBtr0300514 10276053|10276616|10266790|10276616|10276053|10276053|10276053|10266790|10276053 10277555|10277555|10277555|10277555|10277555|10277555|10277555|10277555|10277555 TGATATTA 8mer-A1 dme-miR-283-5p X - 10277086 10277131 3'utr alpha-Man-I FlyBase G49876.1 AATGACGTAGACGTAGGCAAAAACTCTTGATATTAATTATGATATG 21 10277105 0.752342287 5 21 144 1 1.579783597 0.131578947 0.666666667 0.815789474 21 0 0 38 X:10277086-10277131 8 27 3691 FBgn0259170 1144.146667 34.71333333 53.02333333 0.023598373 0.777799117 0.509209782 1 1 1 0.15 dme-miR-252-5p 6mer3-8 GTACTT X 10356816 10356821 - X_10356816_10356821_- 0.91749538 0.627976671 0.772736025 0.204720636 l(1)G0289 FBtr0347009 10348678 10357744 X - 10356813 10356839 5'utr-coding l(1)G0289 FlyBase G66271.1 AGATGTCGAAGAAGGGCTGTACTTTCT 9 10356816 0.579371467 4 7 53 0.727272727 0.903089987 0.181818182 0.222222222 0.363636364 9 3 0 8 X:10356813-10356839 6 l(1)G0289 FBtr0347009 10348678 10357744 GTACTT 6mer3-8 dme-miR-252-5p X - 10356813 10356847 5'utr-coding l(1)G0289 FlyBase G49888.1 GCTTGAAAAGATGTCGAAGAAGGGCTGTACTTTCT 18 10356817 0.681137118 5 16 102 0.875 1.322219295 0.208333333 0.333333333 0.5 18 3 0 21 X:10356813-10356847 6 12.5 3692 FBgn0028331 5573.983333 212.8733333 325.9566667 0.002242561 0.058720366 0.038348656 -5 -4 -4.5 0.15 dme-bantam-3p 6mer3-8 TGATCT X 10357226 10357231 - X_10357226_10357231_- 0.999994429 0.999999435 0.999996932 3.54E-06 l(1)G0289 FBtr0347009|FBtr0071470 10348678|10356827 10357744|10357744 X - 10357030 10357257 5'utr l(1)G0289 FlyBase G66273.2 GAAAGACGACTGGCAACAGCATGAAGTGATCTGTTAAATGTATCTTTTTACCTTTTTTACCGTACCGCCTGCCCATTAGAAGAAAAGCAAAAAAGAGAGAGAGAAAAAAAATGTATAATAATAATGAATAATACCCCAGAAGACAACTCAACTATTGTATAACTCTGAGACCAACGGCTCCCACCAGGCCACGCACACATCCATACCTAAAGCACACACACACACACT 104 10357226 0.965407144 23 93 494 0.880952381 1.744292983 0.158730159 0.201923077 0.341269841 104 14 1 111 X:10357030-10357257 6 l(1)G0289 FBtr0071470|FBtr0347009 10356827|10348678 10357744|10357744 TGATCT 6mer3-8 dme-bantam-3p X - 10357204 10357257 5'utr l(1)G0289 FlyBase G49889.2 GAAAGACGACTGGCAACAGCATGAAGTGATCTGTTAAATGTATCTTTTTACCTT 36 10357226 0.646513221 8 33 224 0.966101695 1.755874856 0.152542373 0.472222222 0.677966102 36 2 0 57 X:10357204-10357257 6 40.5 3693 FBgn0028331 5573.983333 212.8733333 325.9566667 0.007265899 0.190253985 0.124249645 -5 -5 -5 0.15 dme-miR-1012-3p 6mer3-8 TTGACT X 10357294 10357299 - X_10357294_10357299_- 0.999837452 0.911639527 0.95573849 0.062365404 l(1)G0289 FBtr0347009|FBtr0071470 10348678|10356827 10357744|10357744 X - 10357273 10357411 5'utr-coding l(1)G0289 FlyBase G66274.1 ACTGATTGTTGAGATTTAGCTCAGAACGCTGCCGAAACCGAACAAAACAACAACTAAAAAAAGAAATGAAAGCAATTTAGAAGTGTAAAGTATAGACACAGGACCTGAGTTCTTGACTCCCAGTCCCCCGGAACCAACT 20 10357298 0.959457343 13 19 86 0.909090909 1.301029996 0.045454545 0.1 0.181818182 20 2 0 20 X:10357273-10357411 6 l(1)G0289 FBtr0071470|FBtr0347009 10356827|10348678 10357744|10357744 TTGACT 6mer3-8 dme-miR-1012-3p X - 10357269 10357329 5'utr l(1)G0289 FlyBase G49890.1 GTGTAAAGTATAGACACAGGACCTGAGTTCTTGACTCCCAGTCCCCCGGAACCAACTGCTC 8 10357320 0.953472452 4 6 33 0.833333333 0.698970004 0.166666667 0.375 0.583333333 8 1 1 10 X:10357269-10357329 6 3.5 3694 FBgn0028331 5573.983333 212.8733333 325.9566667 0.000627917 0.016441702 0.010737624 -1 21 10 0.15 dme-miR-304-5p 7mer-m8 TGAGATT X 10357396 10357402 - X_10357396_10357402_- 0.620203442 0.620203353 0.620203397 0 l(1)G0289 FBtr0347009|FBtr0071470|FBtr0347008 10348678|10356827|10357355 10357744|10357744|10357744 X - 10357273 10357411 5'utr-coding l(1)G0289 FlyBase G66274.1 ACTGATTGTTGAGATTTAGCTCAGAACGCTGCCGAAACCGAACAAAACAACAACTAAAAAAAGAAATGAAAGCAATTTAGAAGTGTAAAGTATAGACACAGGACCTGAGTTCTTGACTCCCAGTCCCCCGGAACCAACT 20 10357382 0.959457343 13 19 86 0.909090909 1.301029996 0.045454545 0.1 0.181818182 20 2 0 20 X:10357273-10357411 7 l(1)G0289 FBtr0347008|FBtr0071470|FBtr0347009 10357355|10356827|10348678 10357744|10357744|10357744 TGAGATT 7mer-m8 dme-miR-304-5p X - 10357372 10357417 5'utr l(1)G0289 FlyBase G49891.1 TTTTGAACTGATTGTTGAGATTTAGCTCAGAACGCTGCCGAAACCG 7 10357403 0.948855179 4 7 55 1 0.903089987 0 0.142857143 0.25 7 0 0 8 X:10357372-10357417 7 5.5 3695 FBgn0028331 5573.983333 212.8733333 325.9566667 0.000986727 0.025836961 0.016873409 -20 1 -9.5 0.15 dme-miR-11-3p 7mer-m1 TGTGATG X 10357459 10357465 - X_10357459_10357465_- 0.568629829 0.608240438 0.588435133 0.028008924 l(1)G0289 FBtr0347009|FBtr0071470|FBtr0347008 10348678|10356827|10357355 10357744|10357744|10357744 X - 10357427 10357478 5'utr l(1)G0289 FlyBase G66275.1 ACCCGTCTGTAATTGTGATGTGTTCCATGATGCGTCCACAATGTCAACCAAA 13 10357466 0.986179769 5 12 101 1 1.176091259 0.133333333 0.153846154 0.266666667 13 0 0 15 X:10357427-10357478 7 l(1)G0289 FBtr0347008|FBtr0071470|FBtr0347009 10357355|10356827|10348678 10357744|10357744|10357744 TGTGATG 7mer-m1 dme-miR-11-3p X - 10357439 10357485 5'utr l(1)G0289 FlyBase G49892.1 ATTTGAAACCCGTCTGTAATTGTGATGTGTTCCATGATGCGTCCACA 12 10357466 0.977470675 7 10 88 0.75 1.079181246 0.3125 0.25 0.4375 12 4 0 12 X:10357439-10357485 7 10 3696 FBgn0028331 5573.983333 212.8733333 325.9566667 0.001794049 0.046976293 0.030678925 1 1 1 0.15 dme-miR-34-5p 6mer3-8 CACTGC X 10463750 10463755 - X_10463750_10463755_- 0.831881794 0.864660355 0.848271075 0.02317797 nocte FBtr0332953 10461863 10464452 X - 10463735 10463779 3'utr nocte FlyBase G66291.1 AAGAAAAACAAAACGAACCTTTGGCACTGCGTATGCTTTAATTTC 30 10463759 0.946578925 6 30 128 1 1.612783857 0 0.233333333 0.43902439 30 0 0 41 X:10463735-10463779 6 nocte FBtr0332953 10461863 10464452 CACTGC 6mer3-8 dme-miR-34-5p X - 10463739 10463775 3'utr nocte FlyBase G49900.1 AAAACAAAACGAACCTTTGGCACTGCGTATGCTTTAA 14 10463759 0.942634995 4 14 59 1 1.361727836 0 0.428571429 0.652173913 14 0 0 23 X:10463739-10463775 6 21.5 3697 FBgn0261710 3253.496667 44.13333333 68.01666667 0.006608275 0.487160121 0.316098995 4 4 4 0.15 dme-miR-33-5p 7mer-A1 AATGCAA X 10463983 10463989 - X_10463983_10463989_- 0.782900247 0.782569343 0.782734795 0.000233982 nocte FBtr0071460|FBtr0332953|FBtr0307488|FBtr0071461 10463816|10461863|10463816|10463816 10464452|10464452|10464452|10464452 X - 10463934 10464009 3'utr nocte FlyBase G66293.1 AAACGAGTAAGGAATACCTAAATGCAAGAAGAAATATTTAACAAAAATGAACAGAATACAACACCATGCCACACCA 12 10463989 0.917418033 6 12 40 1 1.113943352 0.384615385 0.083333333 0.153846154 12 0 0 13 X:10463934-10464009 7 nocte FBtr0071461|FBtr0307488|FBtr0332953|FBtr0071460 10463816|10463816|10461863|10463816 10464452|10464452|10464452|10464452 AATGCAA 7mer-A1 dme-miR-33-5p X - 10463975 10464034 3'utr nocte FlyBase G49902.1 AAGACGAAAGTTAAGAATCAACAGGAAACGAGTAAGGAATACCTAAATGCAAGAAGAAAT 8 10463988 0.801798429 3 7 17 1 1.113943352 0.076923077 0.5 0.692307692 8 0 0 13 X:10463975-10464034 7 7.5 3698 FBgn0261710 3253.496667 44.13333333 68.01666667 0.002305212 0.169939577 0.110267091 0 -1 -0.5 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA X 10482440 10482447 - X_10482440_10482447_- 0.64341679 0.643067997 0.643242393 0.000246639 CG32687 FBtr0336901|FBtr0071458 10482026|10482026 10482859|10482859 X - 10482411 10482474 3'utr CG32687 FlyBase G66325.1 TGTTACTCACACACCTACACAATCTATACCAAAGAAACTCGACTGGCTTTCACTGGGCAAAAAC 44 10482448 0.952694666 7 37 173 0.851851852 0.963787827 0.018518519 0.181818182 0.333333333 44 4 4 46 X:10482411-10482474 8 CG32687 FBtr0071458|FBtr0336901 10482026|10482026 10482859|10482859 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X - 10482405 10482464 3'utr CG32687 FlyBase G49922.1 ACACCTACACAATCTATACCAAAGAAACTCGACTGGCTTTCACTGGGCAAAAACAAATAG 40 10482448 0.949922093 5 34 149 0.821428571 1.185636577 0 0.325 0.517857143 40 8 2 46 X:10482405-10482464 8 40 3699 FBgn0052687 315.3033333 16.03666667 24.44666667 0.126861964 2.494283933 1.63621489 1 1 1 0.15 dme-miR-317-3p 6mer3-8 TGTGTT X 10482485 10482490 - X_10482485_10482490_- 0.965170397 0.940330441 0.952750419 0.017564532 CG32687 FBtr0336901|FBtr0071458 10482026|10482026 10482859|10482859 X - 10482476 10482566 3'utr CG32687 FlyBase G66326.1 CACACGTTACCAATTTGAACTAGTTTGCTAAGTGATTACACGACCTGTTTGCTTGCTCGCCTTGCGTGCCAATTTCTGTGTTTCTGTTTGC 20 10482519 0.697209296 12 19 168 0.913043478 1.322219295 0.173913043 0.15 0.260869565 20 2 0 21 X:10482476-10482566 6 CG32687 FBtr0071458|FBtr0336901 10482026|10482026 10482859|10482859 TGTGTT 6mer3-8 dme-miR-317-3p X - 10482473 10482570 3'utr CG32687 FlyBase G49923.1 TCTTCACACGTTACCAATTTGAACTAGTTTGCTAAGTGATTACACGACCTGTTTGCTTGCTCGCCTTGCGTGCCAATTTCTGTGTTTCTGTTTGCTTG 21 10482493 0.890878522 15 19 185 0.891891892 0.916453949 0.378378378 0.619047619 0.783783784 21 1 3 33 X:10482473-10482570 6 5.5 3700 FBgn0052687 315.3033333 16.03666667 24.44666667 0.01744352 0.342964041 0.224979547 29 3 16 0.15 dme-miR-8-3p 7mer-m8 CAGTATT X 10490625 10490631 - X_10490625_10490631_- 0.66088875 0.66086141 0.66087508 1.94E-05 spri FBtr0336902|FBtr0310293|FBtr0310296|FBtr0310292|FBtr0336903|FBtr0112690|FBtr0310295|FBtr0336904|FBtr0310438 10490067|10490345|10490345|10490345|10490067|10490067|10490345|10490345|10490345 10490817|10490817|10490817|10490817|10490817|10490817|10490817|10490817|10490817 X - 10490576 10491026 stop_codon spri FlyBase G66339.1 TGTGCCGCATCATTGCGCACAAGGCGCGCATCACAAATCCGCAGGACTATGCGCTCTTTAAGCTGGTCGATGGCGAGGAGACGCTGCTGACGGACGCAGAGTGTCCGCAGGATGCCCGATTGGCGGCCAAGGGAAAGCATTGCATGCTGGCCTACAAGCGGATCGATGCCAAGATCGCCTGGCCGACCGCCCAGCTGGCAGGACACTGAATCATCAGCTCGGGGATGCACCCGATGCAAATATACGACATACCGCCCCGCCCGCTCTGCCCTTCTTGCTCACTAACCAAGCATATTTGATTAATAATTTATTATTATTACATTAAAATATACTTAGTAGCCTGTAAGTAAAGCTAATTAATGCTAATTAGAAAACATCTAATGTGTACTAAACATCAGTATTGAGTTAAGTGTGTTTTTTTTTCCTGACCCACGGGTCAAGCCCCCTTTTT 466 10490632 0.97491484 64 448 2790 0.961538462 2.021189299 0.166666667 0.135193133 0.261904762 466 17 4 525 X:10490576-10491026 7 spri FBtr0336903|FBtr0112690|FBtr0336904|FBtr0310295|FBtr0310438|FBtr0336902|FBtr0310293|FBtr0310296|FBtr0310292 10490067|10490067|10490345|10490345|10490345|10490067|10490345|10490345|10490345 10490817|10490817|10490817|10490817|10490817|10490817|10490817|10490817|10490817 CAGTATT 7mer-m8 dme-miR-8-3p X - 10490611 10490860 stop_codon spri FlyBase G49934.2 TGCCAAGATCGCCTGGCCGACCGCCCAGCTGGCAGGACACTGAATCATCAGCTCGGGGATGCACCCGATGCAAATATACGACATACCGCCCCGCCCGCTCTGCCCTTCTTGCTCACTAACCAAGCATATTTGATTAATAATTTATTATTATTACATTAAAATATACTTAGTAGCCTGTAAGTAAAGCTAATTAATGCTAATTAGAAAACATCTAATGTGTACTAAACATCAGTATTGAGTTAAGTGTGTT 280 10490632 0.928461665 40 255 1741 0.919047619 1.8876173 0.164285714 0.371428571 0.580952381 280 30 4 386 X:10490611-10490860 7 129 3701 FBgn0085443 1112.173333 25.35666667 38.71333333 0.115989114 5.087419482 3.332185294 1 1 1 0.15 dme-miR-968-5p 7mer-m8 ACTACTT X 10713148 10713154 - X_10713148_10713154_- 0.407086831 0.411968084 0.409527457 0.0034516 CG32676 FBtr0071503|FBtr0333017 10713113|10711161 10714398|10714398 X - 10713126 10713268 3'utr CG32676 FlyBase G66371.1 TTTGTCCTACACTTACTATTATAACCCAATTCAACAAATGCAATTAGATCTAGGCGAGTTTAACTTTTAAACTTTTGAGTTGGTTTCATTTGTCTTTGCCTCGTGTGCACCACAACTACTTGATTTCAATAAATGTTTAGTAA 57 10713149 0.765821197 17 53 456 0.947368421 1.857332496 0.065789474 0.280701754 0.460526316 57 4 0 72 X:10713126-10713268 7 CG32676 FBtr0333017|FBtr0071503 10711161|10713113 10714398|10714398 ACTACTT 7mer-m8 dme-miR-968-5p X - 10713126 10713250 3'utr CG32676 FlyBase G49961.1 TTATAACCCAATTCAACAAATGCAATTAGATCTAGGCGAGTTTAACTTTTAAACTTTTGAGTTGGTTTCATTTGTCTTTGCCTCGTGTGCACCACAACTACTTGATTTCAATAAATGTTTAGTAA 55 10713149 0.829515114 16 49 460 0.911392405 1.255272505 0.164556962 0.381818182 0.569620253 55 4 3 72 X:10713126-10713250 7 25 3702 FBgn0052676 977.3866667 21.50333333 32.91666667 0.025578413 1.162610448 0.759493671 -5 -5 -5 0.15 dme-miR-317-3p 6mer3-8 TGTGTT X 10713493 10713498 - X_10713493_10713498_- 0.832722989 0.858412064 0.845567527 0.018164937 CG32676 FBtr0071503|FBtr0333017 10713113|10711161 10714398|10714398 X - 10713434 10713525 3'utr CG32676 FlyBase G66373.1 TTTTTATATATACTTTATCACCAAGAATGTGTTTCGAAACGCGCCGGTAAAGACGAGCGACGAATTGAATTTTGTTCACCTACACCTATACT 253 10713498 0.893785506 17 242 1867 0.942176871 2.442479769 0.068027211 0.138339921 0.258503401 253 17 0 277 X:10713434-10713525 6 CG32676 FBtr0333017|FBtr0071503 10711161|10713113 10714398|10714398 TGTGTT 6mer3-8 dme-miR-317-3p X - 10713434 10713522 3'utr CG32676 FlyBase G49963.2 TTATATATACTTTATCACCAAGAATGTGTTTCGAAACGCGCCGGTAAAGACGAGCGACGAATTGAATTTTGTTCACCTACACCTATACT 120 10713498 0.898102788 14 115 851 0.967032967 2.245512668 0.032967033 0.408333333 0.60989011 120 6 0 176 X:10713434-10713522 6 168.5 3703 FBgn0052676 977.3866667 21.50333333 32.91666667 0.172398505 7.835994419 5.118987342 0 0 0 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT X 10713644 10713650 - X_10713644_10713650_- 0.657161537 0.657509137 0.657335337 0.00024579 CG32676 FBtr0071503|FBtr0333017 10713113|10711161 10714398|10714398 X - 10713538 10713680 3'utr CG32676 FlyBase G66374.1 ACACGATCACACACACACACACCTGGCTTTGGCAGCTTTATGTTATGTTTAACTTTAATAACCGACGGCGGGCTGAATGAAAATCTGCACCAGCGACTGCGATGTGGCGCTTTAACCTAATTTGCCTTAATAGAAAATCGTTT 137 10713651 0.984223356 17 126 1046 0.924528302 1.69019608 0.044025157 0.116788321 0.238993711 137 10 2 147 X:10713538-10713680 7 CG32676 FBtr0333017|FBtr0071503 10711161|10713113 10714398|10714398 GGCAGCT 7mer-m8 dme-miR-980-3p X - 10713625 10713678 3'utr CG32676 FlyBase G49965.1 ACGATCACACACACACACACCTGGCTTTGGCAGCTTTATGTTATGTTTAACTTT 75 10713651 0.691063469 8 73 588 0.971962617 2.017033339 0.018691589 0.36 0.551401869 75 3 0 104 X:10713625-10713678 7 89 3704 FBgn0052676 977.3866667 21.50333333 32.91666667 0.091059151 4.138893195 2.703797468 1 1 1 0.15 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA X 10748666 10748671 + X_10748666_10748671_+ 0.999999946 0.999999926 0.999999936 0 ras FBtr0332294|FBtr0332294|FBtr0071494|FBtr0071494|FBtr0071495|FBtr0071495|FBtr0343043|FBtr0343043 10748202|10748202|10748202|10748202|10748202|10748202|10748202|10748202 10749097|10749097|10748806|10748806|10748806|10748806|10748806|10748806 X + 10748615 10748686 3'utr ras FlyBase G60294.1 CTTCAACTATTCGCTATATATATCTAAAGCGCAACGCGTTGGTTGGCCGCTTACTTATTTTGCACGCTATAT 13 10748657 0.989709099 7 12 119 0.928571429 0.812913357 0.357142857 0.076923077 0.142857143 13 0 1 13 X:10748615-10748686 6 ras FBtr0071495|FBtr0071495|FBtr0343043|FBtr0343043|FBtr0332294|FBtr0332294|FBtr0071494|FBtr0071494 10748202|10748202|10748202|10748202|10748202|10748202|10748202|10748202 10748806|10748806|10748806|10748806|10749097|10749097|10748806|10748806 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" X + 10748649 10748685 3'utr ras FlyBase G45573.1 CGCGTTGGTTGGCCGCTTACTTATTTTGCACGCTATA 8 10748666 0.892106905 4 7 64 0.9 0.954242509 0.1 0.25 0.4 8 1 0 9 X:10748649-10748685 6 8.5 3705 FBgn0003204 319.3466667 15.79333333 24.27333333 0.026616843 0.538201773 0.350178522 9 0 4.5 0.15 dme-miR-1003-3p 6mer3-8 ATGTGA X 10748781 10748786 + X_10748781_10748786_+ 0.999999995 0.99999605 0.999998023 2.76E-06 ras FBtr0332294|FBtr0071494|FBtr0071495|FBtr0343043 10748202|10748202|10748202|10748202 10749097|10748806|10748806|10748806 X + 10748742 10748797 3'utr ras FlyBase G60295.1 AGCTAGCTTCAAGTTTTAAAACTCTGCCAAACTTATTAAATGTGAACTGAAACTAA 12 10748781 0.958213695 7 12 62 1 1.146128036 0 0.166666667 0.285714286 12 0 0 14 X:10748742-10748797 6 ras FBtr0071495|FBtr0343043|FBtr0332294|FBtr0071494 10748202|10748202|10748202|10748202 10748806|10748806|10749097|10748806 ATGTGA 6mer3-8 dme-miR-1003-3p X + 10748773 10748801 3'utr ras FlyBase G45574.1 CTTATTAAATGTGAACTGAAACTAACTGA 9 10748781 0.634579243 5 9 51 1 1.146128036 0 0.333333333 0.571428571 9 0 0 14 X:10748773-10748801 6 8 3706 FBgn0003204 319.3466667 15.79333333 24.27333333 0.025051146 0.506542845 0.329579786 0 0 0 0.15 dme-miR-92b-3p 6mer3-8 GTGCAA X 10760146 10760151 - X_10760146_10760151_- 0.994204544 0.993433973 0.993819258 0.000544826 Tango5 FBtr0071501|FBtr0346377|FBtr0071499|FBtr0334457|FBtr0071500|FBtr0300569 10760046|10760046|10760046|10760046|10760046|10760046 10760485|10760485|10760485|10760485|10760485|10760485 X - 10760123 10760177 3'utr Tango5 FlyBase G66397.1 TAGTCGCGACTAATGAAAAGCAAATTGTGCAAAAGACAAACCAGCCAGAGTAAGC 42 10760153 0.869114202 4 42 110 1 1.755874856 0.157894737 0.238095238 0.438596491 42 0 0 57 X:10760123-10760177 6 Tango5 FBtr0071500|FBtr0300569|FBtr0071499|FBtr0334457|FBtr0071501|FBtr0346377 10760046|10760046|10760046|10760046|10760046|10760046 10760485|10760485|10760485|10760485|10760485|10760485 GTGCAA 6mer3-8 dme-miR-92b-3p X - 10760126 10760238 3'utr Tango5 FlyBase G49976.1 CCTTAGCAATTTTCCGTGTGAGTTCGTTTAACTAAAGTAACGAAAGTGAGGGAGACGCAGCTAGTCGCGACTAATGAAAAGCAAATTGTGCAAAAGACAAACCAGCCAGAGTA 30 10760153 0.914245324 5 29 102 0.979166667 1.371067862 0.166666667 0.333333333 0.583333333 30 0 1 47 X:10760126-10760238 6 33.5 3707 FBgn0052675 1144.95 61.17 93.45 0.02925892 0.547654079 0.358480471 2 2 2 0.15 dme-bantam-3p 6mer3-8 TGATCT X 10760456 10760461 - X_10760456_10760461_- 0.999918937 0.999834826 0.999876881 5.95E-05 Tango5 FBtr0071501|FBtr0346377|FBtr0071499|FBtr0334457|FBtr0071500|FBtr0300569 10760046|10760046|10760046|10760046|10760046|10760046 10760485|10760485|10760485|10760485|10760485|10760485 X - 10760301 10760481 3'utr Tango5 FlyBase G66399.1 TCAGTGGATCAGTCTTCTGTTGATCTTTTTCCCCAACCCTTGGTTTTCGTTTAAATTATTTTGTATATTGCGGCTTTCGCTCTTAGTCAAATGATGTATCTTATGTGAGTGTGTCGGCGAGAGAAAAGGAGACGGCGTGGAAGCCTGAGGAATTTACCATGTAGACTAGACTAGGGAAAAA 65 10760454 0.982050376 22 63 567 0.948717949 1.86923172 0.256410256 0.138461538 0.282051282 65 4 0 74 X:10760301-10760481 6 Tango5 FBtr0071500|FBtr0300569|FBtr0071499|FBtr0334457|FBtr0071501|FBtr0346377 10760046|10760046|10760046|10760046|10760046|10760046 10760485|10760485|10760485|10760485|10760485|10760485 TGATCT 6mer3-8 dme-bantam-3p X - 10760436 10760482 3'utr Tango5 FlyBase G49978.2 ATCAGTGGATCAGTCTTCTGTTGATCTTTTTCCCCAACCCTTGGTTT 26 10760461 0.6119772 7 23 280 0.875 1.243038049 0.05 0.461538462 0.65 26 4 1 35 X:10760436-10760482 6 27 3708 FBgn0052675 1144.95 61.17 93.45 0.023581816 0.44139284 0.288924559 -7 0 -3.5 0.15 dme-bantam-3p 6mer3-8 TGATCT X 10765283 10765288 - X_10765283_10765288_- 0.994519308 0.994696843 0.994608075 0.000125511 Atg8a FBtr0346376|FBtr0346375|FBtr0071498 10764876|10764876|10764876 10765457|10765457|10765457 X - 10765258 10765367 3'utr Atg8a FlyBase G66408.1 AGCTTACAATATGGACGGCGAGTTAGCTAAACGAATTGAGGAAAACCGCAGGAAATGCCACATGAAAAGAACTTGAAATTGATCTGATACGCAGGGCAACAAAAAAAATC 193 10765289 0.968635469 12 189 1051 0.982142857 1.865301426 0.138392857 0.139896373 0.258928571 193 2 2 220 X:10765258-10765367 6 Atg8a FBtr0071498|FBtr0346375|FBtr0346376 10764876|10764876|10764876 10765457|10765457|10765457 TGATCT 6mer3-8 dme-bantam-3p X - 10765263 10765383 3'utr Atg8a FlyBase G49986.1 TTGTGTTTAGCATGCAAGCTTACAATATGGACGGCGAGTTAGCTAAACGAATTGAGGAAAACCGCAGGAAATGCCACATGAAAAGAACTTGAAATTGATCTGATACGCAGGGCAACAAAAA 86 10765289 0.970000449 13 81 461 0.953125 1.609238576 0.15625 0.38372093 0.5859375 86 4 2 122 X:10765263-10765383 6 122 3709 FBgn0052672 2319.966667 259.7 395.21 0.052586962 0.469772815 0.308696642 1 1 1 0.15 dme-miR-252-5p 6mer3-8 GTACTT X 10771103 10771108 + X_10771103_10771108_+ 0.611870477 0.45899986 0.535435168 0.108095838 BTBD9 FBtr0071497|FBtr0334456 10771071|10771071 10771699|10772154 X + 10771079 10771140 3'utr BTBD9 FlyBase G60303.1 CGCCGCTGCGGCCGATAATGTTTTGTACTTGAAATACTCCTGTGGTCTGTTAGCTGTTAGTC 44 10771127 0.686486621 11 43 388 1 1.740362689 0.236363636 0.159090909 0.327272727 44 0 0 55 X:10771079-10771140 6 BTBD9 FBtr0334456|FBtr0071497 10771071|10771071 10772154|10771699 GTACTT 6mer3-8 dme-miR-252-5p X + 10771082 10771140 3'utr BTBD9 FlyBase G45580.1 CGCTGCGGCCGATAATGTTTTGTACTTGAAATACTCCTGTGGTCTGTTAGCTGTTAGTC 23 10771127 0.988184706 8 23 216 1 1.51851394 0.333333333 0.347826087 0.545454545 23 0 0 33 X:10771082-10771140 6 13 3710 FBgn0030228 130.9633333 5.32 8.203333333 0.099264425 2.443609023 1.584721658 -24 -24 -24 0.15 dme-miR-1008-3p 6mer3-8 AGCTGT X 10771130 10771135 + X_10771130_10771135_+ 0.770033651 0.848213639 0.809123645 0.055281537 BTBD9 FBtr0071497|FBtr0334456 10771071|10771071 10771699|10772154 X + 10771079 10771140 3'utr BTBD9 FlyBase G60303.1 CGCCGCTGCGGCCGATAATGTTTTGTACTTGAAATACTCCTGTGGTCTGTTAGCTGTTAGTC 44 10771127 0.686486621 11 43 388 1 1.740362689 0.236363636 0.159090909 0.327272727 44 0 0 55 X:10771079-10771140 6 BTBD9 FBtr0334456|FBtr0071497 10771071|10771071 10772154|10771699 AGCTGT 6mer3-8 dme-miR-1008-3p X + 10771082 10771140 3'utr BTBD9 FlyBase G45580.1 CGCTGCGGCCGATAATGTTTTGTACTTGAAATACTCCTGTGGTCTGTTAGCTGTTAGTC 23 10771127 0.988184706 8 23 216 1 1.51851394 0.333333333 0.347826087 0.545454545 23 0 0 33 X:10771082-10771140 6 15.5 3711 FBgn0030228 130.9633333 5.32 8.203333333 0.118353738 2.913533835 1.889475823 3 3 3 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 10771183 10771189 + X_10771183_10771189_+ 0.458415877 0.604173931 0.531294904 0.10306647 BTBD9 FBtr0071497|FBtr0334456 10771071|10771071 10771699|10772154 X + 10771149 10771230 3'utr BTBD9 FlyBase G60304.1 TAGTTATATTTTGCAGACCGTGCTGCTCTTGTTATCTAGTCCTTCCCAGTGCCCCAATGCTTGGTGGTTCCAAAACCTGTGC 92 10771191 0.753327288 17 85 889 0.91509434 1.50965048 0.103773585 0.152173913 0.264150943 92 7 2 97 X:10771149-10771230 7 BTBD9 FBtr0334456|FBtr0071497 10771071|10771071 10772154|10771699 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X + 10771158 10771281 3'utr BTBD9 FlyBase G45581.1 TTTGCAGACCGTGCTGCTCTTGTTATCTAGTCCTTCCCAGTGCCCCAATGCTTGGTGGTTCCAAAACCTGTGCATTGCATATTGGTTTTGCGTTATTACCTTCGTTATATACTATATGTATATA 72 10771191 0.742343001 16 63 716 0.903508772 2.012837225 0.254385965 0.361111111 0.596491228 72 11 0 103 X:10771158-10771281 7 62 3712 FBgn0030228 130.9633333 5.32 8.203333333 0.473414951 11.65413534 7.557903291 -8 -8 -8 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 10771321 10771326 + X_10771321_10771326_+ 0.999988347 0.999908765 0.999948556 5.62E-05 BTBD9 FBtr0071497|FBtr0071497|FBtr0071497|FBtr0334456|FBtr0334456|FBtr0334456 10771071|10771071|10771071|10771071|10771071|10771071 10771699|10771699|10771699|10772154|10772154|10772154 X + 10771304 10771400 3'utr BTBD9 FlyBase G60306.1 TGTTTTTATAATTTTATTGTGATCCAAAAATAATTCCTTATGTTTGCAAGGCAGCAGAGTTATTTATATAAGCAATATAACTGAATTCTATGCACAC 31 10771319 0.98590632 14 31 258 1 1.591064607 0.025641026 0.193548387 0.358974359 31 0 0 39 X:10771304-10771400 6 BTBD9 FBtr0334456|FBtr0334456|FBtr0334456|FBtr0071497|FBtr0071497|FBtr0071497 10771071|10771071|10771071|10771071|10771071|10771071 10772154|10772154|10772154|10771699|10771699|10771699 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X + 10771309 10771349 3'utr BTBD9 FlyBase G45582.1 TTATAATTTTATTGTGATCCAAAAATAATTCCTTATGTTTG 21 10771320 0.971924366 5 19 169 0.846153846 0.643452676 0.038461538 0.238095238 0.384615385 21 0 4 22 X:10771309-10771349 6 20.5 3713 FBgn0030228 130.9633333 5.32 8.203333333 0.156532363 3.853383459 2.498984153 2 1 1.5 0.15 dme-miR-970-3p 6mer2-7 CTTATG X 10771544 10771549 + X_10771544_10771549_+ 0.999915574 0.999948233 0.999931903 2.31E-05 BTBD9 FBtr0071497|FBtr0334456 10771071|10771071 10771699|10772154 X + 10771460 10771567 3'utr BTBD9 FlyBase G60307.1 GCGAACTCGAATGCGATTTCCGAGCAGCTGAACCAAAATTGTATACGATATCCGATCGCATAGTATAAATCTGTACTGTCTAGCCTTATGTCCGGTCCATGTCCTTGT 18 10771550 0.97930014 12 18 122 1 1.342422681 0.181818182 0.222222222 0.363636364 18 0 0 22 X:10771460-10771567 6 BTBD9 FBtr0334456|FBtr0071497 10771071|10771071 10772154|10771699 CTTATG 6mer2-7 dme-miR-970-3p X + 10771510 10771564 3'utr BTBD9 FlyBase G45584.1 TCCGATCGCATAGTATAAATCTGTACTGTCTAGCCTTATGTCCGGTCCATGTCCT 12 10771549 0.738930404 6 9 92 0.8125 0.812913357 0.25 0.25 0.4375 12 2 1 13 X:10771510-10771564 6 8.5 3714 FBgn0030228 130.9633333 5.32 8.203333333 0.064903663 1.597744361 1.036164161 -6 -5 -5.5 0.15 dme-bantam-3p 6mer3-8 TGATCT X 10781452 10781457 - X_10781452_10781457_- 0.998617217 0.998343298 0.998480257 0.000193677 sesB FBtr0346384|FBtr0073423|FBtr0073422|FBtr0073421|FBtr0073424 10780991|10780991|10780991|10780991|10780891 10781620|10781620|10781620|10781620|10781620 X - 10781421 10781490 5'utr sesB FlyBase G66417.1 AGCAATAGCAACAGCAAAGGCATAAGCTAAGTTTGATCTGCAACCAACACCTCTTACCACGAACAACGGC 77 10781458 0.970164408 7 70 427 0.920454545 1.431363764 0.125 0.116883117 0.227272727 77 5 2 81 X:10781421-10781490 6 sesB FBtr0073424|FBtr0346384|FBtr0073423|FBtr0073422|FBtr0073421 10780891|10780991|10780991|10780991|10780991 10781620|10781620|10781620|10781620|10781620 TGATCT 6mer3-8 dme-bantam-3p X - 10781425 10781479 5'utr sesB FlyBase G49996.1 CAGCAAAGGCATAAGCTAAGTTTGATCTGCAACCAACACCTCTTACCACGAACAA 21 10781457 0.910193931 6 21 118 1 1.602059991 0.025 0.476190476 0.725 21 0 0 40 X:10781425-10781479 6 46.5 3715 FBgn0003360 11391.58667 829.71 1277.313333 0.00408196 0.056043678 0.036404537 1 0 0.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 10789827 10789833 - X_10789827_10789833_- 0.796044793 0.794716406 0.7953806 0.000939321 Imp FBtr0073414|FBtr0073414|FBtr0073414 10787867|10787867|10787867 10797068|10797068|10797068 X - 10789758 10789879 3'utr Imp FlyBase G66431.1 AATCAGACCTCCCCCCTTCTCACTTCTCCAGCGCCTGGTTTGCCTGTGTGATAGTAGTTTATAATTAAAACCATCCGCTGGGCACCCAACTCCCCTCATGGGACCTTAAGCAGTCCCCCCCC 295 10789835 0.989768634 24 281 2760 0.955621302 1.810232518 0.056213018 0.13220339 0.24260355 295 11 4 323 X:10789758-10789879 7 Imp FBtr0073414|FBtr0073414|FBtr0073414 10787867|10787867|10787867 10797068|10797068|10797068 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 10789773 10789878 3'utr Imp FlyBase G50009.1 ATCAGACCTCCCCCCTTCTCACTTCTCCAGCGCCTGGTTTGCCTGTGTGATAGTAGTTTATAATTAAAACCATCCGCTGGGCACCCAACTCCCCTCATGGGACCTT 211 10789835 0.840990894 17 195 2016 0.945619335 1.650446298 0.039274924 0.421800948 0.63141994 211 12 6 313 X:10789773-10789878 7 223.5 3716 FBgn0262735 4183.533333 61.35 94.29666667 0.053423741 3.643031785 2.370179222 2 2 2 0.15 dme-miR-283-5p 6mer3-8 TGATAT X 10790068 10790073 - X_10790068_10790073_- 0.837618095 0.593784294 0.715701194 0.172416533 Imp FBtr0073414 10787867 10797068 X - 10790044 10790196 3'utr Imp FlyBase G66433.1 CTATAAAAAAAATAAGCATGCATAACGCTATATAAATTATAAATCGATAAGCCTGGCGTTGCGTAGTCAGTTTATTGCATTTTATTTGGCATATTGAAAAATGATTTCCGTTTTATCTTCCGTTGATATCTTACTACCCATATGGGAATCAAT 39 10790074 0.930515854 19 38 332 0.978723404 1.662757832 0.063829787 0.153846154 0.29787234 39 1 0 46 X:10790044-10790196 6 Imp FBtr0073414 10787867 10797068 TGATAT 6mer3-8 dme-miR-283-5p X - 10790046 10790093 3'utr Imp FlyBase G50011.1 ATTTCCGTTTTATCTTCCGTTGATATCTTACTACCCATATGGGAATCA 9 10790078 0.87405786 6 9 92 1 1.113943352 0 0.333333333 0.538461538 9 0 0 13 X:10790046-10790093 6 11 3717 FBgn0262735 4183.533333 61.35 94.29666667 0.002629356 0.179299104 0.116653116 1 5 3 0.15 dme-miR-277-3p 7mer-m8 TGCATTT X 10790115 10790121 - X_10790115_10790121_- 0.428717998 0.611496144 0.520107071 0.129243634 Imp FBtr0073414 10787867 10797068 X - 10790044 10790196 3'utr Imp FlyBase G66433.1 CTATAAAAAAAATAAGCATGCATAACGCTATATAAATTATAAATCGATAAGCCTGGCGTTGCGTAGTCAGTTTATTGCATTTTATTTGGCATATTGAAAAATGATTTCCGTTTTATCTTCCGTTGATATCTTACTACCCATATGGGAATCAAT 39 10790122 0.930515854 19 38 332 0.978723404 1.662757832 0.063829787 0.153846154 0.29787234 39 1 0 46 X:10790044-10790196 7 Imp FBtr0073414 10787867 10797068 TGCATTT 7mer-m8 dme-miR-277-3p X - 10790106 10790159 3'utr Imp FlyBase G50012.1 TATAAATCGATAAGCCTGGCGTTGCGTAGTCAGTTTATTGCATTTTATTTGGCA 11 10790122 0.885268022 2 9 94 0.941176471 1.204119983 0.176470588 0.363636364 0.588235294 11 1 0 16 X:10790106-10790159 7 7 3718 FBgn0262735 4183.533333 61.35 94.29666667 0.001673227 0.11409943 0.074233801 1 1 1 0.15 dme-miR-14-3p 7mer-A1 AGACTGA X 10790375 10790381 - X_10790375_10790381_- 0.823218726 0.823181647 0.823200187 2.62E-05 Imp FBtr0073414 10787867 10797068 X - 10790300 10790418 3'utr Imp FlyBase G66434.1 TTCGATTTGTAATAGATTATATACGGTAATCAACTGGAGACTGAGCTACAACATATATTTAGTTACCGTTATATTTATTGCAGAGACACACACACATACATACACTAACACCAACCCCA 745 10790385 0.972319165 25 680 3989 0.913142857 1.94830427 0.138285714 0.139597315 0.267428571 745 68 8 799 X:10790300-10790418 7 Imp FBtr0073414 10787867 10797068 AGACTGA 7mer-A1 dme-miR-14-3p X - 10790333 10790415 3'utr Imp FlyBase G50014.1 GATTTGTAATAGATTATATACGGTAATCAACTGGAGACTGAGCTACAACATATATTTAGTTACCGTTATATTTATTGCAGAGA 546 10790385 0.718578684 21 493 2844 0.923255814 1.945577993 0.197674419 0.41025641 0.625581395 546 58 8 794 X:10790333-10790415 7 555.5 3719 FBgn0262735 4183.533333 61.35 94.29666667 0.132782496 9.054604727 5.890982361 4 4 4 0.15 dme-miR-277-3p 6mer3-8 TGCATT X 10790655 10790660 - X_10790655_10790660_- 0.981911575 0.938666842 0.960289208 0.030578691 Imp FBtr0073414 10787867 10797068 X - 10790635 10790691 3'utr Imp FlyBase G66436.1 AATGCATTAAAATGTTGTATGATGTAGACTATGCATTGGAACGAAACGAAACGAAAC 38 10790667 0.98417967 5 37 292 1 1.672097858 0.425531915 0.189189189 0.361702128 37 0 0 47 X:10790635-10790691 6 Imp FBtr0073414 10787867 10797068 TGCATT 6mer3-8 dme-miR-277-3p X - 10790643 10790728 3'utr Imp FlyBase G50016.1 ATATTGTATATGTACAATAGCAACAACGCAACATCAAAATGCATTAAAATGTTGTATGATGTAGACTATGCATTGGAACGAAACGA 20 10790667 0.980208271 6 20 141 1 1.462397998 0.137931034 0.45 0.620689655 20 0 0 29 X:10790643-10790728 6 26.5 3720 FBgn0262735 4183.533333 61.35 94.29666667 0.006334359 0.43194784 0.281027961 7 7 7 0.15 dme-miR-184-5p 6mer2-7 GATAAG X 10790847 10790852 - X_10790847_10790852_- 0.880418723 0.994736933 0.937577828 0.080835174 Imp FBtr0073416|FBtr0073414 10790803|10787867 10797068|10797068 X - 10790827 10790870 3'utr Imp FlyBase G66437.1 GAAACCCAAAAAAAAAGCGATAAGCATGAACTAAAAACACCCAA 11 10790850 0.949449359 2 11 22 1 1.113943352 0.076923077 0.181818182 0.307692308 11 0 0 13 X:10790827-10790870 6 Imp FBtr0073416|FBtr0073414 10790803|10787867 10797068|10797068 GATAAG 6mer2-7 dme-miR-184-5p X - 10790825 10790859 3'utr Imp FlyBase G50017.1 AAAAAGCGATAAGCATGAACTAAAAACACCCAACA 6 10790849 0.7976646 2 6 12 1 0.903089987 0 0.333333333 0.5 6 0 0 8 X:10790825-10790859 6 8.5 3721 FBgn0262735 4183.533333 61.35 94.29666667 0.002031775 0.138549307 0.090141044 -2 -3 -2.5 0.15 dme-miR-263a-5p 6mer3-8 GTGCCA X 10792594 10792599 - X_10792594_10792599_- 0.94387639 0.949737659 0.946807025 0.004144565 Imp FBtr0073418|FBtr0073416|FBtr0073414 10792506|10790803|10787867 10797068|10797068|10797068 X - 10792551 10792631 3'utr Imp FlyBase G66439.1 AATGAGAAAAGTACTTTTTTGTGTTGTAAGTTGTGCCAAGTACTGATAACGTTTAAGGTGTGATAAACTCGTTTTTAAATT 36 10792600 0.850214232 12 35 287 0.97826087 1.653212514 0.130434783 0.277777778 0.434782609 36 1 0 45 X:10792551-10792631 6 Imp FBtr0073416|FBtr0073414|FBtr0073418 10790803|10787867|10792506 10797068|10797068|10797068 GTGCCA 6mer3-8 dme-miR-263a-5p X - 10792539 10792623 3'utr Imp FlyBase G50020.1 AAGTACTTTTTTGTGTTGTAAGTTGTGCCAAGTACTGATAACGTTTAAGGTGTGATAAACTCGTTTTTAAATTTAACAACTATTT 34 10792591 0.983330066 10 32 259 0.94 1.672097858 0.34 0.352941176 0.56 34 3 0 47 X:10792539-10792623 6 25 3722 FBgn0262735 4183.533333 61.35 94.29666667 0.00597581 0.407497963 0.265120718 1 -8 -3.5 0.15 dme-miR-282-5p 8mer-A1 AGAGGCTA X 10793075 10793082 - X_10793075_10793082_- 0.637899649 0.637896246 0.637897948 2.40E-06 Imp FBtr0073418|FBtr0073416|FBtr0073414 10792506|10790803|10787867 10797068|10797068|10797068 X - 10793016 10793165 3'utr Imp FlyBase G66440.1 AGAGAACTCAGTTTGAAGAACGAAGAAAGAAAAGCGATTGTGAGTTGTGTGAAAAGCAGAAACGAAATTATTTTTTAGTATTTAGAGGCTATTTTATATCGTTATTAAAGCAGGTAGGCAAGTGAGGCAACGGTTAGGAAAAAAAGGAAG 235 10793083 0.984308871 24 222 1734 0.949090909 2.416640507 0.141818182 0.157446809 0.28 235 14 0 261 X:10793016-10793165 8 Imp FBtr0073416|FBtr0073414|FBtr0073418 10790803|10787867|10792506 10797068|10797068|10797068 AGAGGCTA 8mer-A1 dme-miR-282-5p X - 10793013 10793184 3'utr Imp FlyBase G50021.1 TAATGATAATGATGTAGAAAGAGAACTCAGTTTGAAGAACGAAGAAAGAAAAGCGATTGTGAGTTGTGTGAAAAGCAGAAACGAAATTATTTTTTAGTATTTAGAGGCTATTTTATATCGTTATTAAAGCAGGTAGGCAAGTGAGGCAACGGTTAGGAAAAAAAGGAAGTGA 196 10793083 0.987128278 29 181 1389 0.928082192 1.955848036 0.157534247 0.336734694 0.554794521 196 19 2 271 X:10793013-10793184 8 82.5 3723 FBgn0262735 4183.533333 61.35 94.29666667 0.019720173 1.344743276 0.87489837 1 1 1 0.15 dme-miR-307a-3p 6mer2-7 GTTGTG X 10793117 10793122 - X_10793117_10793122_- 0.902584641 0.977589303 0.940086972 0.053036332 Imp FBtr0073418|FBtr0073416|FBtr0073414 10792506|10790803|10787867 10797068|10797068|10797068 X - 10793016 10793165 3'utr Imp FlyBase G66440.1 AGAGAACTCAGTTTGAAGAACGAAGAAAGAAAAGCGATTGTGAGTTGTGTGAAAAGCAGAAACGAAATTATTTTTTAGTATTTAGAGGCTATTTTATATCGTTATTAAAGCAGGTAGGCAAGTGAGGCAACGGTTAGGAAAAAAAGGAAG 235 10793122 0.984308871 24 222 1734 0.949090909 2.416640507 0.141818182 0.157446809 0.28 235 14 0 261 X:10793016-10793165 6 Imp FBtr0073416|FBtr0073414|FBtr0073418 10790803|10787867|10792506 10797068|10797068|10797068 GTTGTG 6mer2-7 dme-miR-307a-3p X - 10793013 10793184 3'utr Imp FlyBase G50021.1 TAATGATAATGATGTAGAAAGAGAACTCAGTTTGAAGAACGAAGAAAGAAAAGCGATTGTGAGTTGTGTGAAAAGCAGAAACGAAATTATTTTTTAGTATTTAGAGGCTATTTTATATCGTTATTAAAGCAGGTAGGCAAGTGAGGCAACGGTTAGGAAAAAAAGGAAGTGA 196 10793121 0.987128278 29 181 1389 0.928082192 1.955848036 0.157534247 0.336734694 0.554794521 196 19 2 271 X:10793013-10793184 6 72 3724 FBgn0262735 4183.533333 61.35 94.29666667 0.017210333 1.173594132 0.763547669 0 -1 -0.5 0.15 dme-miR-1003-3p 6mer2-7 TGTGAG X 10793222 10793227 - X_10793222_10793227_- 0.958556921 0.997892634 0.978224777 0.02781454 Imp FBtr0073418|FBtr0073416|FBtr0073414 10792506|10790803|10787867 10797068|10797068|10797068 X - 10793198 10793266 3'utr Imp FlyBase G66441.1 ATAAATGAGGATAAAGATCGAGGTAACAACTAAAAAACTTGTGAGTTAGCGTGCGCGTTAAAAACGAAA 14 10793221 0.973597046 5 14 80 1 1.146128036 0.071428571 0 0 14 0 0 14 X:10793198-10793266 6 Imp FBtr0073416|FBtr0073414|FBtr0073418 10790803|10787867|10792506 10797068|10797068|10797068 TGTGAG 6mer2-7 dme-miR-1003-3p X - 10793203 10793260 3'utr Imp FlyBase G50022.1 GAGGATAAAGATCGAGGTAACAACTAAAAAACTTGTGAGTTAGCGTGCGCGTTAAAAA 14 10793221 0.969164241 4 14 73 1 1.380211242 0.208333333 0.357142857 0.625 14 0 0 24 X:10793203-10793260 6 12 3725 FBgn0262735 4183.533333 61.35 94.29666667 0.002868389 0.195599022 0.127257945 -6 -6 -6 0.15 dme-bantam-3p 6mer3-8 TGATCT X 10793754 10793759 - X_10793754_10793759_- 0.99273362 0.993303652 0.993018636 0.000403122 Imp FBtr0073418|FBtr0073416|FBtr0073414 10792506|10790803|10787867 10797068|10797068|10797068 X - 10793746 10793784 3'utr Imp FlyBase G66442.1 AAGAATGTTGCTGGGCATTTACCATTGATCTTTATATAC 10 10793760 0.612909663 4 7 108 0.75 0.954242509 0.25 0.2 0.333333333 10 3 0 9 X:10793746-10793784 6 Imp FBtr0073416|FBtr0073414|FBtr0073418 10790803|10787867|10792506 10797068|10797068|10797068 TGATCT 6mer3-8 dme-bantam-3p X - 10793740 10793781 3'utr Imp FlyBase G50024.1 AATGTTGCTGGGCATTTACCATTGATCTTTATATACGAGTAT 7 10793760 0.751734379 4 7 78 1 0.954242509 0.222222222 0.285714286 0.444444444 7 0 0 9 X:10793740-10793781 6 8 3726 FBgn0262735 4183.533333 61.35 94.29666667 0.001912259 0.130399348 0.08483863 1 1 1 0.15 dme-miR-304-5p 7mer-m8 TGAGATT X 10796118 10796124 - X_10796118_10796124_- 0.594842714 0.589630487 0.5922366 0.003685582 Imp FBtr0073418|FBtr0305150|FBtr0346315|FBtr0073415|FBtr0073416|FBtr0073414|FBtr0073413|FBtr0301409|FBtr0305149|FBtr0073420|FBtr0073417 10792506|10795995|10795995|10794336|10790803|10787867|10795435|10795995|10795995|10795995|10795995 10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068 X - 10796102 10796197 3'utr Imp FlyBase G66447.2 TTTTTAACAAAGATTTAGTAAGCTTACATTTAAGTGGAATGAATAGAAGAGAAGTGAGCAAAGCGTAAGAGAATGAGATTGAGAATCAATTTAAAA 182 10796124 0.926608973 8 178 652 0.981308411 1.84509804 0.191588785 0.148351648 0.275700935 182 2 2 210 X:10796102-10796197 7 Imp FBtr0301409|FBtr0073420|FBtr0073416|FBtr0305149|FBtr0073417|FBtr0073414|FBtr0073413|FBtr0346315|FBtr0073415|FBtr0073418|FBtr0305150 10795995|10795995|10790803|10795995|10795995|10787867|10795435|10795995|10794336|10792506|10795995 10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068 TGAGATT 7mer-m8 dme-miR-304-5p X - 10796111 10796166 3'utr Imp FlyBase G50028.1 AAGTGGAATGAATAGAAGAGAAGTGAGCAAAGCGTAAGAGAATGAGATTGAGAATC 110 10796124 0.925280572 3 109 380 0.994117647 2.227886705 0.2 0.354545455 0.582352941 110 1 0 169 X:10796111-10796166 7 140.5 3727 FBgn0262735 4183.533333 61.35 94.29666667 0.033584052 2.290138549 1.489978437 0 0 0 0.15 dme-miR-1007-3p 6mer3-8 TGAGCT X 10796708 10796713 - X_10796708_10796713_- 0.999533752 0.881882172 0.940707962 0.083192244 Imp FBtr0073418|FBtr0305150|FBtr0346315|FBtr0073415|FBtr0073416|FBtr0073419|FBtr0073414|FBtr0073413|FBtr0301409|FBtr0305149|FBtr0073420|FBtr0073417 10792506|10795995|10795995|10794336|10790803|10796211|10787867|10795435|10795995|10795995|10795995|10795995 10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068 X - 10796710 10796767 3'utr Imp FlyBase G66450.1 CATAAGCAAAATTTTACGCATATAGAACTGTAGGGGAACCACCACATCAAAAAGTGAG 11 10796739 0.930532633 7 9 44 0.833333333 1 0.083333333 0.090909091 0.166666667 11 2 0 10 X:10796710-10796767 3 Imp FBtr0301409|FBtr0073420|FBtr0073416|FBtr0305149|FBtr0073419|FBtr0073417|FBtr0073414|FBtr0073413|FBtr0346315|FBtr0073415|FBtr0073418|FBtr0305150 10795995|10795995|10790803|10795995|10796211|10795995|10787867|10795435|10795995|10794336|10792506|10795995 10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068|10797068 TGAGCT 6mer3-8 dme-miR-1007-3p X - 10796685 10796764 3'utr Imp FlyBase G50032.1 AAGCAAAATTTTACGCATATAGAACTGTAGGGGAACCACCACATCAAAAAGTGAGCTGCGTGAAGAGCTCTACTAGTTCA 10 10796721 0.862987187 6 9 27 1 1.176091259 0.133333333 0.4 0.6 10 0 0 15 X:10796685-10796764 6 1.5 3728 FBgn0262735 4183.533333 61.35 94.29666667 0.000358549 0.024449878 0.015907243 26 8 17 0.15 dme-miR-276a-3p 6mer3-8 AGTTCC X 10833255 10833260 - X_10833255_10833260_- 0.894920758 0.719346679 0.807133719 0.124149637 sbr FBtr0073411 10832750 10833508 X - 10833234 10833286 3'utr sbr FlyBase G66468.1 TCGATAGATTAGTTTAGCTCTCTTTAAGTTCCGTCCGCAGATCCGCTGGTCTA 10 10833258 0.775412459 4 10 84 1 1.079181246 0.083333333 0.2 0.333333333 10 0 0 12 X:10833234-10833286 6 sbr FBtr0073411 10832750 10833508 AGTTCC 6mer3-8 dme-miR-276a-3p X - 10833235 10833316 3'utr sbr FlyBase G50045.1 CGGGCAATGTGCATCAACGATCACAGTTCTTCGATAGATTAGTTTAGCTCTCTTTAAGTTCCGTCCGCAGATCCGCTGGTCT 11 10833258 0.987117343 5 9 75 0.8 1.079181246 0.133333333 0.272727273 0.466666667 11 3 0 12 X:10833235-10833316 6 7.5 3729 FBgn0003321 977.3433333 36.05 55.19 0.007673864 0.208044383 0.135894184 -2 -2 -2 0.15 dme-miR-79-3p 8mer-A1 TAGCTTTA X 10862879 10862886 + X_10862879_10862886_+ 0.625315941 0.625345655 0.625330798 2.11E-05 CG2186 FBtr0073381|FBtr0332961 10862782|10862782 10863580|10866246 X + 10862817 10862980 3'utr CG2186 FlyBase G60340.1 TATAACTATTATCGATTATAGATGTACGACGATGATGGGGAGTAGTGCAGTAAGCAGTACTTTAGCTTTAAGGTAAAAAGTTATAAATAGTTGAGCTTTCTTTATAAATAGCGGATTATACATATATCTAGATGTCATGTAATTGGTGGGTGTGCGTGAGGGTC 22 10862878 0.98390638 12 21 179 0.966666667 1.161368002 0.1 0.272727273 0.466666667 22 0 1 29 X:10862817-10862980 8 CG2186 FBtr0073381|FBtr0332961 10862782|10862782 10863580|10866246 TAGCTTTA 8mer-A1 dme-miR-79-3p X + 10862810 10862944 3'utr CG2186 FlyBase G45607.1 AGTTTTCTATAACTATTATCGATTATAGATGTACGACGATGATGGGGAGTAGTGCAGTAAGCAGTACTTTAGCTTTAAGGTAAAAAGTTATAAATAGTTGAGCTTTCTTTATAAATAGCGGATTATACATATATC 27 10862878 0.993591984 11 26 200 1 1.643452676 0.386363636 0.481481481 0.681818182 27 0 0 44 X:10862810-10862944 8 10 3730 FBgn0030243 1064.863333 20.89333333 32.09 0.009390876 0.47862157 0.311623559 1 1 1 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC X 10863491 10863497 + X_10863491_10863497_+ 0.64492475 0.645797452 0.645361101 0.000617163 CG2186 FBtr0073381|FBtr0332961 10862782|10862782 10863580|10866246 X + 10863438 10863545 3'utr CG2186 FlyBase G60345.1 ATTTTATACATTGTGCCCCGTTGATTGTAAATGAAATTTATTGTCTGTCCTGTTGTGTTCTTTGTAACTACTATAAACCACATACGAAACTATGTTAGCTTGTGAACT 88 10863490 0.790500796 16 87 1048 0.99047619 2.017033339 0.295238095 0.113636364 0.257142857 88 1 0 104 X:10863438-10863545 7 CG2186 FBtr0073381|FBtr0332961 10862782|10862782 10863580|10866246 TGTGTTC 7mer-m8 dme-miR-317-3p X + 10863443 10863512 3'utr CG2186 FlyBase G45611.1 ATACATTGTGCCCCGTTGATTGTAAATGAAATTTATTGTCTGTCCTGTTGTGTTCTTTGTAACTACTATA 49 10863490 0.992978706 6 49 582 1 1.838849091 0.231884058 0.285714286 0.492753623 49 0 0 69 X:10863443-10863512 7 61 3731 FBgn0030243 1064.863333 20.89333333 32.09 0.057284346 2.919591576 1.900903708 1 1 1 0.15 dme-miR-304-5p 6mer2-7 GAGATT X 10864011 10864016 + X_10864011_10864016_+ 0.999989047 0.999871563 0.999930305 8.30E-05 CG2186 FBtr0332961 10862782 10866246 X + 10863981 10864040 3'utr CG2186 FlyBase G60349.1 TCGAAGATAATGCGAAATGCCTAGACTAAAGAGATTGTTAAATTATTGCCACTCCCGCTC 7 10864017 0.986355677 5 5 40 0.75 0.77815125 0.25 0.142857143 0.25 7 2 0 6 X:10863981-10864040 6 CG2186 FBtr0332961 10862782 10866246 GAGATT 6mer2-7 dme-miR-304-5p X + 10863978 10864037 3'utr CG2186 FlyBase G45613.1 GCGTCGAAGATAATGCGAAATGCCTAGACTAAAGAGATTGTTAAATTATTGCCACTCCCG 8 10864017 0.971664377 4 6 41 0.933333333 1.146128036 0.466666667 0.625 0.8 8 1 0 14 X:10863978-10864037 6 5.5 3732 FBgn0030243 1064.863333 20.89333333 32.09 0.005164982 0.263241863 0.171392957 -6 -6 -6 0.15 dme-miR-79-3p 7mer-m8 TAGCTTT X 10864685 10864691 + X_10864685_10864691_+ 0.619886816 0.620035626 0.619961221 0.000105217 CG2186 FBtr0332961 10862782 10866246 X + 10864577 10864735 3'utr CG2186 FlyBase G60353.1 AATATGATATAATATATGGATTAATAAAAACCAATTATACCACGTGCACACATAAAAGCGTGCGGCAGCATAACTGTATAAACATCTAAAAATTATTCCAAGTGATTTTAGCTTTTTAAGAACCAAGTCGAAACAAACTGAACACTCGTAGTGGAAAAC 56 10864683 0.989285765 14 56 530 1 1.819543936 0.151515152 0.160714286 0.287878788 56 0 0 66 X:10864577-10864735 7 CG2186 FBtr0332961 10862782 10866246 TAGCTTT 7mer-m8 dme-miR-79-3p X + 10864661 10864735 3'utr CG2186 FlyBase G45616.1 TCTAAAAATTATTCCAAGTGATTTTAGCTTTTTAAGAACCAAGTCGAAACAAACTGAACACTCGTAGTGGAAAAC 37 10864683 0.99987835 6 35 353 0.944444444 1.707570176 0.12962963 0.378378378 0.574074074 37 3 0 51 X:10864661-10864735 7 38 3733 FBgn0030243 1064.863333 20.89333333 32.09 0.035685331 1.818761966 1.184169523 2 2 2 0.15 dme-miR-308-3p 8mer-m1 CTGTGATT X 10864799 10864806 + X_10864799_10864806_+ 0.385559565 0.385560608 0.385560087 7.07E-07 CG2186 FBtr0332961 10862782 10866246 X + 10864760 10864823 3'utr CG2186 FlyBase G60354.1 AAACAAAAATTGAAATGATTCCAATTTGCAAATCCGAGTCTGTGATTATTTTTATATTATTCTT 44 10864798 0.988869372 12 44 416 1 1.763427994 0 0.25 0.431034483 44 0 0 58 X:10864760-10864823 8 CG2186 FBtr0332961 10862782 10866246 CTGTGATT 8mer-m1 dme-miR-308-3p X + 10864776 10864815 3'utr CG2186 FlyBase G45617.1 GATTCCAATTTGCAAATCCGAGTCTGTGATTATTTTTATA 32 10864798 0.75912235 10 29 304 0.872340426 1.311753861 0 0.28125 0.510638298 32 5 1 41 X:10864776-10864815 8 36 3734 FBgn0030243 1064.863333 20.89333333 32.09 0.033807155 1.723037652 1.121844811 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 10865093 10865099 + X_10865093_10865099_+ 0.778514526 0.79376636 0.786140443 0.010784722 CG2186 FBtr0332961|FBtr0332961|FBtr0332961 10862782|10862782|10862782 10866246|10866246|10866246 X + 10865055 10865119 3'utr CG2186 FlyBase G60355.1 TCAAATAGATTAGATTACTTGGGGATTCGTCATTTATGTGTGATATACCATATATATGTATAGTT 36 10865091 0.989506363 6 29 394 0.80952381 1.531478917 0.047619048 0.138888889 0.261904762 36 8 0 34 X:10865055-10865119 7 CG2186 FBtr0332961|FBtr0332961|FBtr0332961 10862782|10862782|10862782 10866246|10866246|10866246 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X + 10865016 10865113 3'utr CG2186 FlyBase G45618.1 AAATCGGTTTGCGATCAGGCTCCAACGCTCCATTCTCAGTCAAATAGATTAGATTACTTGGGGATTCGTCATTTATGTGTGATATACCATATATATGT 22 10865090 0.989701717 7 21 206 0.96969697 1.505149978 0.03030303 0.272727273 0.515151515 22 1 0 32 X:10865016-10865113 7 26.5 3735 FBgn0030243 1064.863333 20.89333333 32.09 0.024885823 1.26834716 0.825802431 2 3 2.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 10865385 10865390 + X_10865385_10865390_+ 0.97968433 0.980148749 0.97991654 0.00032838 CG2186 FBtr0332961 10862782 10866246 X + 10865295 10865412 3'utr CG2186 FlyBase G60356.1 ATCGCCAATACATTTTACCTGTGTATAGTGTATAGTTAAGAACCGACTAGCAGAAATGCAAACACTATTCGATGTTAGTTATCTATATATGTACCTAGAAAGTTACTCTCTATGTGTG 54 10865384 0.946230999 11 49 461 0.921875 1.293730757 0.15625 0.185185185 0.3125 54 3 2 59 X:10865295-10865412 6 CG2186 FBtr0332961 10862782 10866246 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X + 10865361 10865403 3'utr CG2186 FlyBase G45621.1 ATTCGATGTTAGTTATCTATATATGTACCTAGAAAGTTACTCT 25 10865384 0.790406837 4 25 229 1 1.579783597 0.210526316 0.44 0.631578947 25 0 0 38 X:10865361-10865403 6 28 3736 FBgn0030243 1064.863333 20.89333333 32.09 0.026294454 1.340140396 0.872545964 1 1 1 0.15 dme-miR-252-5p 6mer3-8 GTACTT X 10874076 10874081 - X_10874076_10874081_- 0.923517675 0.842790364 0.883154019 0.057082821 CG1637 FBtr0339836|FBtr0073406 10873898|10873898 10874473|10874473 X - 10874057 10874094 3'utr CG1637 FlyBase G66509.1 ATGTGTATGGGATGTACTTGATATACTTATTAGGATCA 18 10874082 0.839540507 4 17 167 0.958333333 1.361727836 0.291666667 0.222222222 0.416666667 18 1 0 23 X:10874057-10874094 6 CG1637 FBtr0339836|FBtr0073406 10873898|10873898 10874473|10874473 GTACTT 6mer3-8 dme-miR-252-5p X - 10874058 10874091 3'utr CG1637 FlyBase G50078.1 TGTATGGGATGTACTTGATATACTTATTAGGATC 8 10874082 0.815908866 4 8 79 1 1.041392685 0.181818182 0.375 0.545454545 8 0 0 11 X:10874058-10874091 6 13 3737 FBgn0030245 450.3333333 29.93666667 45.6 0.028867506 0.434250084 0.285087719 1 1 1 0.15 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 11094392 11094399 + X_11094392_11094399_+ 0.631126146 0.631126252 0.631126199 1.41E-07 CG2061 FBtr0073429|FBtr0332383|FBtr0073431 11094303|11094303|11094303 11094660|11094947|11094660 X + 11094366 11094448 3'utr CG2061 FlyBase G60372.1 TCGAATCAGGGAGAGTTATCATCATTTCTAGTCACTTGTTTGCCGATTTTTCTCTCATTGTTGCCTTTGCGTTCACCCAGCGA 209 11094391 0.794624299 12 200 2075 0.958174905 1.799340549 0.406844106 0.220095694 0.380228137 209 8 3 252 X:11094366-11094448 8 CG2061 FBtr0073431|FBtr0073429|FBtr0332383 11094303|11094303|11094303 11094660|11094660|11094947 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X + 11094366 11094414 3'utr CG2061 FlyBase G45629.1 TCGAATCAGGGAGAGTTATCATCATTTCTAGTCACTTGTTTGCCGATTT 126 11094391 0.961042815 6 123 1220 0.97740113 2.238046103 0.463276836 0.349206349 0.536723164 126 4 0 173 X:11094366-11094414 8 164 3738 FBgn0027498 98.96 5.68 8.753333333 1.657235247 28.87323944 18.73571973 1 1 1 0.15 dme-bantam-3p 6mer2-7 GATCTC X 11094526 11094531 + X_11094526_11094531_+ 0.85231902 0.938731358 0.895525189 0.061102794 CG2061 FBtr0073429|FBtr0332383|FBtr0073431 11094303|11094303|11094303 11094660|11094947|11094660 X + 11094500 11094614 3'utr CG2061 FlyBase G60373.2 CCCAGGTCCCGATGGAGCCCGTATCCGATCTCTGAGCGCACCGCTTGCTGGAATGTTCTCAGTCATTCTCATATCAAAATTCTCTGTGCTTTACGCTAAGCAATTAACTTAATAC 78 11094532 0.972476441 13 74 446 0.965909091 1.929418926 0.25 0.115384615 0.215909091 78 3 0 85 X:11094500-11094614 6 CG2061 FBtr0073431|FBtr0073429|FBtr0332383 11094303|11094303|11094303 11094660|11094660|11094947 GATCTC 6mer2-7 dme-bantam-3p X + 11094495 11094600 3'utr CG2061 FlyBase G45630.1 TAGATCCCAGGTCCCGATGGAGCCCGTATCCGATCTCTGAGCGCACCGCTTGCTGGAATGTTCTCAGTCATTCTCATATCAAAATTCTCTGTGCTTTACGCTAAGC 68 11094532 0.895780851 9 64 357 0.96 1.982271233 0.49 0.308823529 0.53 68 4 0 96 X:11094495-11094600 6 55.5 3739 FBgn0027498 98.96 5.68 8.753333333 0.56083266 9.771126761 6.340441736 -6 -6 -6 0.15 dme-miR-2a-2-5p 8mer-A1 TGATGAGA X 11111872 11111879 + X_11111872_11111879_+ 0.601126004 0.60099848 0.601062242 9.02E-05 Hsp60 FBtr0073434|FBtr0073435 11111824|11111824 11112308|11112308 X + 11111831 11111914 3'utr Hsp60 FlyBase G60388.1 TGCCACTGACTGGTCGACAGCCGGAGAGGGGGAGGGAGATGTGATGAGAACCGAAACCAGCATACTGTTTAAGTCACGATGTGG 64 11111875 0.887892394 7 60 171 0.941176471 1.329058719 0.25 0.0625 0.117647059 64 2 2 64 X:11111831-11111914 8 Hsp60 FBtr0073435|FBtr0073434 11111824|11111824 11112308|11112308 TGATGAGA 8mer-A1 dme-miR-2a-2-5p X + 11111831 11111915 3'utr Hsp60 FlyBase G45641.1 TGCCACTGACTGGTCGACAGCCGGAGAGGGGGAGGGAGATGTGATGAGAACCGAAACCAGCATACTGTTTAAGTCACGATGTGGA 50 11111874 0.889051715 7 49 142 0.985915493 1.84509804 0.281690141 0.26 0.478873239 50 1 0 70 X:11111831-11111915 8 45 3740 FBgn0015245 2987.88 154.9833333 236.8566667 0.015060846 0.290353801 0.189988319 -3 -2 -2.5 0.15 dme-miR-263a-5p 7mer-m1 TGCCATT X 11112690 11112696 - X_11112690_11112696_- 0.752371442 0.753599904 0.752985673 0.000868681 CG11122 FBtr0073481 11112393 11112850 X - 11112653 11112722 3'utr CG11122 FlyBase G66526.1 ATCGCCGCCATCGATCACATACGTACTGCCATTGTGTCATCGTTAATCGTTAACGCCGGCGCCAGGAGGG 29 11112691 0.980362346 6 28 198 0.974358974 1.278753601 0.076923077 0.172413793 0.384615385 29 0 1 38 X:11112653-11112722 7 CG11122 FBtr0073481 11112393 11112850 TGCCATT 7mer-m1 dme-miR-263a-5p X - 11112643 11112720 3'utr CG11122 FlyBase G50089.1 CGCCGCCATCGATCACATACGTACTGCCATTGTGTCATCGTTAATCGTTAACGCCGGCGCCAGGAGGGGATCAGGATC 14 11112691 0.97753838 4 14 95 1 1.477121255 0.2 0.714285714 0.866666667 14 0 0 30 X:11112643-11112720 7 20 3741 FBgn0030266 709.6566667 7.043333333 10.83 0.028182642 2.8395646 1.846722068 -5 -5 -5 0.15 dme-miR-277-3p 7mer-m8 TGCATTT X 11129983 11129989 - X_11129983_11129989_- 0.620173851 0.619759136 0.619966493 0.000293308 Klp10A FBtr0346270|FBtr0073479|FBtr0073477|FBtr0073478 11129360|11129360|11129360|11129360 11130979|11130979|11130979|11130979 X - 11129964 11130006 3'utr Klp10A FlyBase G66557.1 ATGATTTAGAGATGATTTGCATTTCATTTTGTACTAATATTTA 8 11129990 0.990776445 3 7 78 1 1 0.1 0.25 0.4 8 0 0 10 X:11129964-11130006 7 Klp10A FBtr0073478|FBtr0073477|FBtr0346270|FBtr0073479 11129360|11129360|11129360|11129360 11130979|11130979|11130979|11130979 TGCATTT 7mer-m8 dme-miR-277-3p X - 11129955 11130011 3'utr Klp10A FlyBase G50110.1 TTATTATGATTTAGAGATGATTTGCATTTCATTTTGTACTAATATTTATTGCATATA 6 11129990 0.990042897 3 6 63 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 X:11129955-11130011 7 5.5 3742 FBgn0030268 2688.253333 72.09666667 110.64 0.002045938 0.076286467 0.049710774 1 1 1 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 11139630 11139635 + X_11139630_11139635_+ 0.999999851 0.991993575 0.995996713 0.005661309 CG18292 FBtr0073437|FBtr0330387 11138901|11138943 11139689|11139689 X + 11139587 11139653 3'utr CG18292 FlyBase G60404.1 ACTATATGTATGAGAGCAAATACGACTAAGTTCAAGCATGTATACCAAACCGAAACCGAAATCGAAA 15 11139627 0.774037782 7 13 57 0.894736842 1.230448921 0.105263158 0.2 0.368421053 15 2 0 17 X:11139587-11139653 6 CG18292 FBtr0330387|FBtr0073437 11138943|11138901 11139689|11139689 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 11139605 11139647 3'utr CG18292 FlyBase G45653.1 AATACGACTAAGTTCAAGCATGTATACCAAACCGAAACCGAAA 8 11139627 0.928481755 2 8 30 1 1.079181246 0.333333333 0.375 0.583333333 8 0 0 12 X:11139605-11139647 6 8 3743 FBgn0030269 445.6566667 29.48666667 44.88 0.017951039 0.271309066 0.178253119 3 3 3 0.15 dme-miR-33-5p 6mer3-8 CAATGC X 11163063 11163068 + X_11163063_11163068_+ 0.913002367 0.568145262 0.740573814 0.243850794 Dlic FBtr0073441|FBtr0073444|FBtr0073443 11162784|11162784|11162784 11163196|11164670|11164670 X + 11163009 11163090 3'utr Dlic FlyBase G60423.1 CAGTTTCGCAAGGGGCTAGCTTCTAAGTTGTTAAGTTGTTCCACGGAACGTGATCAATGCCCAGAGATTGTTCTTCATAACC 16 11163065 0.964295909 7 16 85 1 1.342422681 0.272727273 0.1875 0.409090909 16 0 0 22 X:11163009-11163090 6 Dlic FBtr0073441|FBtr0073444|FBtr0073443 11162784|11162784|11162784 11163196|11164670|11164670 CAATGC 6mer3-8 dme-miR-33-5p X + 11163041 11163174 3'utr Dlic FlyBase G45669.1 AAGTTGTTCCACGGAACGTGATCAATGCCCAGAGATTGTTCTTCATAACCAATTCAAAACTTTTAAGGTACTCATTTGATGGGTTCCATAGCCACTAGTGATTCTTTTTACGAGCCTTCTGCTTTATACTCAAA 15 11163066 0.980086076 9 14 100 1 1.255272505 0 0.2 0.333333333 15 0 0 18 X:11163041-11163174 6 11 3744 FBgn0030276 2529.746667 84.58333333 130.21 0.004348261 0.130049261 0.084478919 -2 -3 -2.5 0.15 dme-miR-184-5p 6mer3-8 TGATAA X 11163453 11163458 + X_11163453_11163458_+ 0.996722277 0.999455815 0.998089046 0.001932876 Dlic FBtr0073444|FBtr0073443 11162784|11162784 11164670|11164670 X + 11163348 11163479 3'utr Dlic FlyBase G60426.1 TGTTGTGCTCCTCCCAGCGCAGCTAGCTCCGCTCTGCATGTGTTTAAAGGGCCTTGGCGAGATGACAGAGAGAGAGAGAGAGAGAGATAGAGAGAGAGAGGATAATGATAATGATAATGGTAACGATAATGA 41 11163451 0.96468802 11 35 183 0.844444444 1.278753601 0.155555556 0.097560976 0.177777778 41 6 1 38 X:11163348-11163479 6 Dlic FBtr0073444|FBtr0073443 11162784|11162784 11164670|11164670 TGATAA 6mer3-8 dme-miR-184-5p X + 11163392 11163473 3'utr Dlic FlyBase G45671.1 TAAAGGGCCTTGGCGAGATGACAGAGAGAGAGAGAGAGAGAGATAGAGAGAGAGAGGATAATGATAATGATAATGGTAACGA 34 11163451 0.947847317 6 29 122 0.875 1.213074825 0.178571429 0.5 0.696428571 34 5 2 49 X:11163392-11163473 6 28.5 3745 FBgn0030276 2529.746667 84.58333333 130.21 0.01126595 0.336945813 0.218877198 2 2 2 0.15 dme-miR-1008-3p 6mer3-8 AGCTGT X 11163566 11163571 + X_11163566_11163571_+ 0.819848216 0.827229411 0.823538814 0.005219297 Dlic FBtr0073444|FBtr0073443 11162784|11162784 11164670|11164670 X + 11163554 11163658 3'utr Dlic FlyBase G60427.1 AATTATTTAATGAGCTGTAAAATGTAATTAACAAATGGCAGACAAACGAGAGATTCGAACACGATTCAAGATCCCTGCGATGATGAGTATGGCTTGCTACTAGCC 13 11163564 0.967206905 9 12 64 1 1.230448921 0.470588235 0.230769231 0.411764706 13 0 0 17 X:11163554-11163658 6 Dlic FBtr0073444|FBtr0073443 11162784|11162784 11164670|11164670 AGCTGT 6mer3-8 dme-miR-1008-3p X + 11163540 11163577 3'utr Dlic FlyBase G45672.1 ACATTTGTATAATAAATTATTTAATGAGCTGTAAAATG 6 11163564 0.977534853 2 6 45 1 1.041392685 0.636363636 0.666666667 0.818181818 6 0 0 11 X:11163540-11163577 6 6 3746 FBgn0030276 2529.746667 84.58333333 130.21 0.002371779 0.070935961 0.04607941 2 2 2 0.15 dme-miR-283-5p 8mer-m1 TGATATTT X 11333669 11333676 + X_11333669_11333676_+ 0.555484329 0.553702155 0.554593242 0.001260135 CG1657 FBtr0073448 11333527 11334071 X + 11333648 11333684 3'utr CG1657 FlyBase G60461.1 ATGTATATGTATGTCTGTGTCTGATATTTGTGTAAAA 7 11333668 0.614516572 5 7 65 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 X:11333648-11333684 8 CG1657 FBtr0073448 11333527 11334071 TGATATTT 8mer-m1 dme-miR-283-5p X + 11333603 11333677 3'utr CG1657 FlyBase G45699.1 TCCCATCCCACTCTCTCCTCCAGTCGATATTTTCCATATTTATATATGTATATGTATGTCTGTGTCTGATATTTG 10 11333663 0.991519419 6 10 108 1 1.278753601 0.157894737 0.7 0.842105263 10 0 0 19 X:11333603-11333677 8 7 3747 FBgn0030286 666.2266667 13.88 21.43333333 0.010506935 0.504322767 0.32659409 1 6 3.5 0.15 dme-miR-8-3p 7mer-A1 AGTATTA X 11334360 11334366 - X_11334360_11334366_- 0.82321942 0.823347346 0.823283383 9.04E-05 Kap3 FBtr0343145|FBtr0289956|FBtr0289954|FBtr0289955|FBtr0343146 11334185|11334185|11334185|11334185|11334185 11334788|11334788|11334788|11334788|11334788 X - 11334337 11334428 3'utr Kap3 FlyBase G66610.1 ATGGCTTAGCTTCCACTTTGGTTGTTCGCAACGCAATTACTGTGCAATAATCTCTCACTTAAAGTATTACGTCGAACGTTTTTAGTTGTACT 11 11334370 0.990975075 9 10 91 0.909090909 1 0.272727273 0 0 11 1 0 10 X:11334337-11334428 7 Kap3 FBtr0289956|FBtr0289954|FBtr0289955|FBtr0343146|FBtr0343145 11334185|11334185|11334185|11334185|11334185 11334788|11334788|11334788|11334788|11334788 AGTATTA 7mer-A1 dme-miR-8-3p X - 11334350 11334428 3'utr Kap3 FlyBase G50154.1 ATGGCTTAGCTTCCACTTTGGTTGTTCGCAACGCAATTACTGTGCAATAATCTCTCACTTAAAGTATTACGTCGAACGT 10 11334369 0.980381356 6 9 83 0.909090909 1 0.090909091 0.1 0.181818182 10 1 0 10 X:11334350-11334428 7 7 3748 FBgn0028421 198.6666667 6.38 9.766666667 0.035234899 1.097178683 0.716723549 4 3 3.5 0.15 dme-miR-1007-3p 7mer-m8 TGAGCTT X 11344132 11344138 + X_11344132_11344138_+ 0.61394493 0.596981535 0.605463233 0.011994935 CG34348 FBtr0112557 11344094 11344734 X + 11344108 11344204 3'utr CG34348 FlyBase G60467.2 TAGCGCATAGAGAGATTAACAGATTGAGCTTGGTCCTGGCCATACAAAACAGACTTTGTTCCATGTACTTGATGACAGTACTTCATGGCAGCGCCAT 80 11344124 0.966840782 16 56 537 0.714285714 0.967815317 0.120879121 0.125 0.230769231 80 20 6 65 X:11344108-11344204 7 CG34348 FBtr0112557 11344094 11344734 TGAGCTT 7mer-m8 dme-miR-1007-3p X + 11344088 11344222 stop_codon CG34348 FlyBase G45703.1 AGGAGTGATCCATGATCGTTTAGCGCATAGAGAGATTAACAGATTGAGCTTGGTCCTGGCCATACAAAACAGACTTTGTTCCATGTACTTGATGACAGTACTTCATGGCAGCGCCATATATGCATATATCTCACT 59 11344124 0.986234546 14 42 388 0.727272727 1.158362492 0.070707071 0.423728814 0.656565657 59 23 4 72 X:11344088-11344222 7 50 3749 FBgn0085377 250.7633333 13.94666667 21.41 0.199391192 3.585086042 2.33535731 8 8 8 0.15 dme-miR-986-5p 6mer2-7 TTCGAG X 11344251 11344256 + X_11344251_11344256_+ 0.999992124 0.74729219 0.873642157 0.178685813 CG34348 FBtr0112557 11344094 11344734 X + 11344224 11344330 3'utr CG34348 FlyBase G60468.1 TGTAAATGCCTACCCAGAACTTTTGCCTTCGAGTTGATTGCGATCCGGACGAGCTGTGGCTCGAGTATGAGTGATTCGATTAGCCCTTTAGATATGACTAAGCACTT 26 11344246 0.767994193 10 25 194 0.931034483 1.431363764 0.310344828 0.115384615 0.206896552 26 2 0 27 X:11344224-11344330 6 CG34348 FBtr0112557 11344094 11344734 TTCGAG 6mer2-7 dme-miR-986-5p X + 11344227 11344303 3'utr CG34348 FlyBase G45703.2 AAATGCCTACCCAGAACTTTTGCCTTCGAGTTGATTGCGATCCGGACGAGCTGTGGCTCGAGTATGAGTGATTCGAT 21 11344246 0.862334063 8 19 135 1 1.531478917 0.294117647 0.428571429 0.647058824 21 0 0 34 X:11344227-11344303 6 12.5 3750 FBgn0085377 250.7633333 13.94666667 21.41 0.049847798 0.896271511 0.583839327 5 5 5 0.15 dme-miR-33-5p 7mer-A1 AATGCAA X 11344532 11344538 + X_11344532_11344538_+ 0.781120627 0.781107317 0.781113972 9.40E-06 CG34348 FBtr0112557 11344094 11344734 X + 11344470 11344542 3'utr CG34348 FlyBase G60469.1 AGGCACATTAAGCAATTATGTCGCTAGTTTTCCATTAGGTATATCATTTTTGTACCTTTTTTAATGCAACAGT 5 11344529 0.988405962 5 5 58 1 0.698970004 0.2 0 0 5 0 0 5 X:11344470-11344542 7 CG34348 FBtr0112557 11344094 11344734 AATGCAA 7mer-A1 dme-miR-33-5p X + 11344510 11344542 3'utr CG34348 FlyBase G45705.1 ATATCATTTTTGTACCTTTTTTAATGCAACAGT 4 11344529 0.985609229 4 4 34 1 0.698970004 0.2 0.25 0.4 4 0 0 5 X:11344510-11344542 7 3 3751 FBgn0085377 250.7633333 13.94666667 21.41 0.011963472 0.215105163 0.140121439 3 3 3 0.15 dme-miR-317-3p 6mer3-8 TGTGTT X 11358250 11358255 + X_11358250_11358255_+ 0.999610174 0.999162315 0.999386245 0.000316713 dsh FBtr0073454 11358224 11358724 X + 11358158 11358271 stop_codon dsh FlyBase G60497.1 GAGGCGGTGGCGGTGGCGGCAACAATACCAACGATCAGGACGTATCCGTATTTAATTACGTATTGTAGAAACCTTTCTTTTTGCAATCAAATTGTGTTTTTAATTAATTAAATT 20 11358249 0.986814766 9 18 158 0.956521739 1.342422681 0.043478261 0.1 0.217391304 20 1 0 22 X:11358158-11358271 6 dsh FBtr0073454 11358224 11358724 TGTGTT 6mer3-8 dme-miR-317-3p X + 11358233 11358273 3'utr dsh FlyBase G45723.1 TCTTTTTGCAATCAAATTGTGTTTTTAATTAATTAAATTAA 5 11358249 0.975905947 2 5 73 1 0.903089987 0 0.6 0.75 5 0 0 8 X:11358233-11358273 6 7 3752 FBgn0000499 392 16.79 25.82333333 0.017857143 0.41691483 0.271072673 1 1 1 0.15 dme-miR-2b-2-5p 6mer3-8 TTGAAG X 11359988 11359993 + X_11359988_11359993_+ 0.956034547 0.983603555 0.969819051 0.019494298 Pa1 FBtr0073456 11359762 11360929 X + 11359977 11360009 3'utr Pa1 FlyBase G60502.1 ATTTAGAGAGTTTGAAGTTTGAACATCAAAACA 9 11359988 0.750827602 3 9 69 1 1 0 0.111111111 0.2 9 0 0 10 X:11359977-11360009 6 Pa1 FBtr0073456 11359762 11360929 TTGAAG 6mer3-8 dme-miR-2b-2-5p X + 11359976 11360009 3'utr Pa1 FlyBase G45729.1 CATTTAGAGAGTTTGAAGTTTGAACATCAAAACA 10 11359988 0.74403505 4 9 69 0.9375 0.875061263 0.125 0.5 0.6875 10 0 1 15 X:11359976-11360009 6 9 3753 FBgn0030294 242.3333333 18.24 28.02 0.037138927 0.493421053 0.321199143 0 0 0 0.15 dme-miR-14-3p 6mer3-8 AAGACT X 11360437 11360442 + X_11360437_11360442_+ 0.955342459 0.920347877 0.937845168 0.024744919 Pa1 FBtr0073456 11359762 11360929 X + 11360397 11360634 3'utr Pa1 FlyBase G60505.1 TGACAATATTCTTGATAGTATTGTCCGAAACCGACGTTTGAAGACTAGAATATAGAATATAGGATAGAACGGATGTAAATTTAAATCCAATGCGAGTAAAGCAGATAACAAGATAGGCAACTGTAGATCAGTCAACTTCTGTACATAAAAGAACTGAATTTCACTAATAGCTGTTAAAACTAGAATATAGAATGTAGGATAGAACGGATGTACATTTAAATCCAAGATGAGTAAGATA 110 11360442 0.975511654 24 105 612 0.96031746 2.08278537 0.142857143 0.127272727 0.238095238 110 5 0 121 X:11360397-11360634 6 Pa1 FBtr0073456 11359762 11360929 AAGACT 6mer3-8 dme-miR-14-3p X + 11360409 11360467 3'utr Pa1 FlyBase G45732.1 TGATAGTATTGTCCGAAACCGACGTTTGAAGACTAGAATATAGAATATAGGATAGAACG 45 11360433 0.747640826 5 42 253 0.971014493 1.826074803 0.086956522 0.4 0.608695652 45 2 0 67 X:11360409-11360467 6 50.5 3754 FBgn0030294 242.3333333 18.24 28.02 0.208390646 2.768640351 1.802284083 -5 4 -0.5 0.15 dme-miR-1007-3p 6mer3-8 TGAGCT X 11360735 11360740 + X_11360735_11360740_+ 0.99971508 0.835587203 0.917651141 0.116055951 Pa1 FBtr0073456 11359762 11360929 X + 11360661 11360789 3'utr Pa1 FlyBase G60506.1 AGTCAACTTCCGTACATACAACTAATACGAAATGAATCAGCACAGTTGCCCTACTAAACAATATCAACTTCTCATGAGCTAAAAATAGACTACTAAGAATTATGATAAGCCAAGGTTGTTCCGGAAAAC 19 11360735 0.976716669 9 16 97 0.85 1.230448921 0.15 0.052631579 0.1 19 3 0 17 X:11360661-11360789 6 Pa1 FBtr0073456 11359762 11360929 TGAGCT 6mer3-8 dme-miR-1007-3p X + 11360701 11360764 3'utr Pa1 FlyBase G45734.1 CACAGTTGCCCTACTAAACAATATCAACTTCTCATGAGCTAAAAATAGACTACTAAGAATTATG 16 11360746 0.964495768 6 15 83 0.95 1.278753601 0.1 0.25 0.4 16 1 0 19 X:11360701-11360764 6 14 3755 FBgn0030294 242.3333333 18.24 28.02 0.057771664 0.76754386 0.499643112 0 -11 -5.5 0.15 dme-miR-317-3p 6mer3-8 TGTGTT X 11361418 11361423 - X_11361418_11361423_- 0.960259958 0.961702353 0.960981155 0.001019931 hop FBtr0073457 11360928 11361814 X - 11361402 11361456 3'utr hop FlyBase G66628.1 ATGTATATGTATAAACAAATTCTCAACCTACTTTGTGTTATACATTTTAGACAAC 30 11361425 0.728777607 6 29 268 0.970588235 1.51851394 0 0.133333333 0.235294118 30 1 0 33 X:11361402-11361456 6 hop FBtr0073457 11360928 11361814 TGTGTT 6mer3-8 dme-miR-317-3p X - 11361365 11361450 3'utr hop FlyBase G50168.1 ATGTATAAACAAATTCTCAACCTACTTTGTGTTATACATTTTAGACAACTTTGTTAAATATTGTTAAGCTTGAGCTTCAATTTTTT 22 11361425 0.983430569 5 22 173 1 1.556302501 0.055555556 0.454545455 0.666666667 22 0 0 36 X:11361365-11361450 6 15 3756 FBgn0004864 288.6033333 6.79 10.3 0.051974452 2.209131075 1.45631068 2 2 2 0.15 dme-miR-277-3p 6mer2-7 GCATTT X 11361589 11361594 - X_11361589_11361594_- 0.786606667 0.850659998 0.818633333 0.045292523 hop FBtr0073457 11360928 11361814 X - 11361530 11361606 3'utr hop FlyBase G66629.1 ACGCCATCGCAAGCATTTTTGGATTCTCGCCAGATCTTAGTTTTATTTGATTGTGCTTACCACTGGCCACGCCCCCC 10 11361585 0.978012723 7 9 71 0.846153846 1.041392685 0.230769231 0.3 0.461538462 10 2 0 11 X:11361530-11361606 6 hop FBtr0073457 11360928 11361814 GCATTT 6mer2-7 dme-miR-277-3p X - 11361540 11361618 3'utr hop FlyBase G50169.1 CCGGATACACTTACGCCATCGCAAGCATTTTTGGATTCTCGCCAGATCTTAGTTTTATTTGATTGTGCTTACCACTGGC 10 11361588 0.984422444 8 9 74 1 1.230448921 0.058823529 0.5 0.705882353 10 0 0 17 X:11361540-11361618 6 5 3757 FBgn0004864 288.6033333 6.79 10.3 0.017324817 0.736377025 0.485436893 -9 -6 -7.5 0.15 dme-miR-184-3p 6mer3-8 TCCGTC X 11368939 11368944 + X_11368939_11368944_+ 0.612566729 0.804656179 0.708611454 0.135827788 Tim8 FBtr0343640|FBtr0073482 11368879|11368879 11369283|11369183 X + 11368894 11368967 3'utr Tim8 FlyBase G60510.1 ATCGACACCGACACCGGGATCTGGGTATCCGAGTCCGTGGACGCTTCCGTCACTGTCCTACTGTTAAATCTATT 130 11368938 0.97920259 9 127 869 0.98 2.167317335 0.12 0.130769231 0.246666667 130 3 0 147 X:11368894-11368967 6 Tim8 FBtr0343640|FBtr0073482 11368879|11368879 11369283|11369183 TCCGTC 6mer3-8 dme-miR-184-3p X + 11368919 11368961 3'utr Tim8 FlyBase G45735.1 TATCCGAGTCCGTGGACGCTTCCGTCACTGTCCTACTGTTAAA 65 11368938 0.810731683 5 65 406 1 1.973127854 0.095744681 0.323076923 0.531914894 65 0 0 94 X:11368919-11368961 6 95 3758 FBgn0027359 213.3333333 41.63666667 63.68333333 0.4453125 2.281642783 1.491756085 1 1 1 0.15 dme-miR-1008-3p 6mer2-7 GCTGTG X 11388263 11388268 + X_11388263_11388268_+ 0.996323269 0.920897387 0.958610328 0.053334165 dlg1 FBtr0073483|FBtr0073491|FBtr0073492|FBtr0302114|FBtr0333263 11388173|11388173|11388173|11388173|11388173 11389291|11389291|11389291|11389291|11389291 X + 11388243 11388283 3'utr dlg1 FlyBase G60511.1 AAGGAGGTGGAAAACAGCTGGCTGTGTAATTAGCCCCCCCC 11 11388261 0.962726822 3 11 52 1 1.041392685 0 0 0 11 0 0 11 X:11388243-11388283 6 dlg1 FBtr0333263|FBtr0302114|FBtr0073492|FBtr0073491|FBtr0073483 11388173|11388173|11388173|11388173|11388173 11389291|11389291|11389291|11389291|11389291 GCTGTG 6mer2-7 dme-miR-1008-3p X + 11388220 11388273 3'utr dlg1 FlyBase G45736.1 AGCAATCAGCTCGCGGAAAAGCCAAGGAGGTGGAAAACAGCTGGCTGTGTAATT 7 11388261 0.964536224 2 6 27 0.833333333 1 0.333333333 0.571428571 0.75 7 2 0 10 X:11388220-11388273 6 8 3759 FBgn0001624 7812.856667 177.1533333 273.5833333 0.001023953 0.04515862 0.029241547 2 2 2 0.15 dme-miR-317-3p 7mer-A1 GTGTTCA X 11406703 11406709 + X_11406703_11406709_+ 0.823334282 0.769675028 0.796504655 0.037942855 dlg1 FBtr0330390|FBtr0301289|FBtr0073485|FBtr0112813|FBtr0073486|FBtr0073488|FBtr0308088|FBtr0073489|FBtr0073487|FBtr0308089|FBtr0333261|FBtr0112812|FBtr0073490|FBtr0333262 11406300|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177 11407751|11407751|11407751|11409776|11407751|11407751|11407985|11407751|11407751|11408338|11408338|11409776|11407751|11409776 X + 11406681 11406762 3'utr dlg1 FlyBase G60525.1 TGGCATATGAGATGAGATATGGGTGTTCAAACGGTAGCGGACAAAGGTGTATAGTTTTTAGTTAGAACAAAGTTGGATATAA 8 11406700 0.981467526 6 8 57 1 0.954242509 0.111111111 0.125 0.222222222 8 0 0 9 X:11406681-11406762 7 dlg1 FBtr0073487|FBtr0333261|FBtr0112812|FBtr0073490|FBtr0308089|FBtr0333262|FBtr0073489|FBtr0073485|FBtr0301289|FBtr0073486|FBtr0112813|FBtr0073488|FBtr0330390|FBtr0308088 11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406300|11406177 11407751|11408338|11409776|11407751|11408338|11409776|11407751|11407751|11407751|11407751|11409776|11407751|11407751|11407985 GTGTTCA 7mer-A1 dme-miR-317-3p X + 11406675 11406762 3'utr dlg1 FlyBase G45739.1 GGCATATGGCATATGAGATGAGATATGGGTGTTCAAACGGTAGCGGACAAAGGTGTATAGTTTTTAGTTAGAACAAAGTTGGATATAA 13 11406701 0.98017639 8 11 84 0.823529412 1.146128036 0.117647059 0.230769231 0.411764706 13 3 0 14 X:11406675-11406762 7 3.5 3760 FBgn0001624 7812.856667 177.1533333 273.5833333 0.00044798 0.019756896 0.012793177 3 2 2.5 0.15 dme-miR-13b-2-5p 7mer-m1 TTGACGC X 11407329 11407335 + X_11407329_11407335_+ 0.827141179 0.826575348 0.826858263 0.000400152 dlg1 FBtr0330390|FBtr0301289|FBtr0073485|FBtr0112813|FBtr0073486|FBtr0073488|FBtr0308088|FBtr0073489|FBtr0073487|FBtr0308089|FBtr0333261|FBtr0112812|FBtr0073490|FBtr0333262 11406300|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177 11407751|11407751|11407751|11409776|11407751|11407751|11407985|11407751|11407751|11408338|11408338|11409776|11407751|11409776 X + 11407318 11407377 3'utr dlg1 FlyBase G60531.1 ATTGATGAATATTGACGCTAATAACGATGGAGATGATGAAAAACGTTGGTGCATTTGTTG 22 11407329 0.767864433 6 20 125 0.935483871 1.462397998 0.322580645 0.227272727 0.451612903 22 2 0 29 X:11407318-11407377 7 dlg1 FBtr0073487|FBtr0333261|FBtr0112812|FBtr0073490|FBtr0308089|FBtr0333262|FBtr0073489|FBtr0073485|FBtr0301289|FBtr0073486|FBtr0112813|FBtr0073488|FBtr0330390|FBtr0308088 11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406300|11406177 11407751|11408338|11409776|11407751|11408338|11409776|11407751|11407751|11407751|11407751|11409776|11407751|11407751|11407985 TTGACGC 7mer-m1 dme-miR-13b-2-5p X + 11407309 11407423 3'utr dlg1 FlyBase G45743.1 TAAATATATATTGATGAATATTGACGCTAATAACGATGGAGATGATGAAAAACGTTGGTGCATTTGTTGTTAGATGTATGTAATTTTTCCCACTCGCCTTTGCCTAAAAGCAACA 27 11407329 0.861610961 10 26 188 0.974358974 1.278753601 0.358974359 0.333333333 0.538461538 27 0 1 38 X:11407309-11407423 7 14.5 3761 FBgn0001624 7812.856667 177.1533333 273.5833333 0.001855915 0.081849998 0.053000305 0 0 0 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT X 11432091 11432097 - X_11432091_11432097_- 0.658995624 0.658999046 0.658997335 2.40E-06 Evi5 FBtr0300733|FBtr0332620|FBtr0073547 11431331|11431331|11430521 11433279|11434760|11433279 X - 11432053 11432118 3'utr Evi5 FlyBase G66657.1 TGGTTCATTTAACCCATATTTGGCAGCTTGTCGCGTAAAACGATTTCGATTTTGACATCGACTTTC 310 11432098 0.7391194 10 302 2354 0.974093264 2.274157849 0.007772021 0.193548387 0.352331606 310 9 1 376 X:11432053-11432118 7 Evi5 FBtr0300733|FBtr0332620|FBtr0073547 11431331|11431331|11430521 11433279|11434760|11433279 GGCAGCT 7mer-m8 dme-miR-980-3p X - 11432058 11432127 3'utr Evi5 FlyBase G50187.1 TGATTTATATGGTTCATTTAACCCATATTTGGCAGCTTGTCGCGTAAAACGATTTCGATTTTGACATCGA 151 11432098 0.978917616 10 149 1096 0.99122807 2.354108439 0.00877193 0.370860927 0.583333333 151 2 0 226 X:11432058-11432127 7 226.5 3762 FBgn0262740 507.6533333 10.50666667 16.15 0.446170615 21.55774112 14.0247678 1 1 1 0.15 dme-miR-1003-3p 7mer-A1 TGTGAGA X 11432830 11432836 - X_11432830_11432836_- 0.822912071 0.822939653 0.822925862 1.95E-05 Evi5 FBtr0300733|FBtr0332620|FBtr0073547 11431331|11431331|11430521 11433279|11434760|11433279 X - 11432695 11432896 3'utr Evi5 FlyBase G66660.1 ATGTTTTGCAATCGAAACACACTCATATTTATTTATTTTAAATCCTAATTGAAACGATATTGTGAGAGTATTTTACACCCCTGTACATTAATCAATACGGCAACTAATCCGATTCGATGCGATGCGATGGATTGGAGTTAGGAGATTGGCATTTTGATATACCCTAGATGTATGGCACATATGCAATGCAATGAATTTTATG 80 11432837 0.900703208 25 75 580 0.943820225 1.225309282 0.101123596 0.1 0.191011236 80 1 4 84 X:11432695-11432896 7 Evi5 FBtr0300733|FBtr0332620|FBtr0073547 11431331|11431331|11430521 11433279|11434760|11433279 TGTGAGA 7mer-A1 dme-miR-1003-3p X - 11432781 11432850 3'utr Evi5 FlyBase G50188.2 AATTGAAACGATATTGTGAGAGTATTTTACACCCCTGTACATTAATCAATACGGCAACTAATCCGATTCG 31 11432837 0.767691074 5 28 190 0.954545455 1.62324929 0.295454545 0.35483871 0.545454545 31 2 0 42 X:11432781-11432850 7 31 3763 FBgn0262740 507.6533333 10.50666667 16.15 0.061065294 2.950507614 1.919504644 1 1 1 0.15 dme-bantam-3p 6mer3-8 TGATCT X 11433320 11433325 - X_11433320_11433325_- 0.95258043 0.968305031 0.960442731 0.011118971 Evi5 FBtr0332620 11431331 11434760 X - 11433253 11433352 stop_codon Evi5 FlyBase G66662.1 GATCGAATCGACCGAGATCGACTTCAATGATCTGAATATGGTGAGGCGCGGAAGTACGGAGCTCTCCACATAACCTACAGATGGATCAGATCTAGCATAT 64 11433325 0.976300365 5 64 412 1 1.880813592 0.328947368 0.15625 0.289473684 64 0 0 76 X:11433253-11433352 6 Evi5 FBtr0332620 11431331 11434760 TGATCT 6mer3-8 dme-bantam-3p X - 11433299 11433346 3'utr Evi5 FlyBase G50190.1 ATCGACCGAGATCGACTTCAATGATCTGAATATGGTGAGGCGCGGAAG 35 11433325 0.875833396 3 33 232 0.934782609 1.633468456 0.52173913 0.228571429 0.413043478 35 3 0 43 X:11433299-11433346 6 48 3764 FBgn0262740 507.6533333 10.50666667 16.15 0.094552713 4.568527919 2.972136223 0 0 0 0.15 dme-miR-92b-3p 6mer3-8 GTGCAA X 11458577 11458582 + X_11458577_11458582_+ 0.72813513 0.689753938 0.708944534 0.027139607 HP5 FBtr0073499 11458311 11459227 X + 11458564 11458586 3'utr HP5 FlyBase G60557.1 GAGAAAGCTATTGGTGCAAACGT 6 11458575 0.600288547 3 6 22 1 0.903089987 0 0.166666667 0.375 6 0 0 8 X:11458564-11458586 6 HP5 FBtr0073499 11458311 11459227 GTGCAA 6mer3-8 dme-miR-92b-3p X + 11458537 11458584 3'utr HP5 FlyBase G45762.1 GTTGAAAATACCAAAGTATTTTTGCAAGAGAAAGCTATTGGTGCAAAC 6 11458575 0.960394324 3 5 24 0.9 0.653212514 0.5 0.333333333 0.6 6 0 1 9 X:11458537-11458584 6 4.5 3765 FBgn0030301 1355.486667 49.67666667 76.80666667 0.003319841 0.090585788 0.058588664 2 2 2 0.15 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT X 11553276 11553282 + X_11553276_11553282_+ 0.521901973 0.513384196 0.517643085 0.006022994 Drak FBtr0301021|FBtr0340295|FBtr0301020 11552953|11552953|11552953 11555045|11555045|11555045 X + 11553218 11553302 3'utr Drak FlyBase G60586.1 AATAGGAAACGGGAACGGGAACTTAAACTTGAACTGGAATTGGAAGTGGAGCTGGAATTGGTGCTGCAGCGGGAGATGGAAGTGG 26 11553275 0.970333928 8 23 132 0.882352941 1.477121255 0.852941176 0.269230769 0.441176471 26 4 0 30 X:11553218-11553302 7 Drak FBtr0301021|FBtr0340295|FBtr0301020 11552953|11552953|11552953 11555045|11555045|11555045 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" X + 11553245 11553297 3'utr Drak FlyBase G45781.1 CTTGAACTGGAATTGGAAGTGGAGCTGGAATTGGTGCTGCAGCGGGAGATGGA 9 11553275 0.967972778 2 7 43 0.8 0.903089987 0.4 0.111111111 0.2 9 2 0 8 X:11553245-11553297 7 13 3766 FBgn0052666 1917.906667 50.05 76.71666667 0.006778223 0.25974026 0.169454703 1 1 1 0.15 dme-miR-92b-3p 6mer2-7 TGCAAT X 11555560 11555565 - X_11555560_11555565_- 0.80936015 0.873322164 0.841341157 0.045228035 CG1572 FBtr0073544|FBtr0073543|FBtr0339694|FBtr0339693 11555283|11555283|11555283|11555048 11555615|11555615|11555615|11555615 X - 11555546 11555584 3'utr CG1572 FlyBase G66671.1 CGGCCATTCAAGTGGAATTTGCAATCTCGAAGCATTTGT 16 11555565 0.882661665 4 16 89 1 1.255272505 0.277777778 0.125 0.222222222 16 0 0 18 X:11555546-11555584 6 CG1572 FBtr0339694|FBtr0339693|FBtr0073544|FBtr0073543 11555283|11555048|11555283|11555283 11555615|11555615|11555615|11555615 TGCAAT 6mer2-7 dme-miR-92b-3p X - 11555534 11555575 3'utr CG1572 FlyBase G50199.1 AAGTGGAATTTGCAATCTCGAAGCATTTGTTCTTCCCACAAC 14 11555565 0.968793623 4 13 71 0.958333333 1.361727836 0.166666667 0.428571429 0.666666667 14 1 0 23 X:11555534-11555575 6 14.5 3767 FBgn0030309 992.9133333 125.4333333 190.21 0.01460349 0.115599256 0.076231534 0 0 0 0.15 dme-miR-14-3p 6mer3-8 AAGACT X 11563120 11563125 - X_11563120_11563125_- 0.969228531 0.994823386 0.982025958 0.018098327 RpII215 FBtr0073542 11562798 11563511 X - 11563091 11563164 3'utr RpII215 FlyBase G66678.1 CTTTGCACAACCCACTGTATGAAATTGTTTACTAACTGGAAGACTCTTGTCACTCTTCTGCAAAGTACTTTCAC 22 11563110 0.985400882 12 20 156 0.935483871 1.462397998 0.064516129 0.363636364 0.548387097 22 2 0 29 X:11563091-11563164 6 RpII215 FBtr0073542 11562798 11563511 AAGACT 6mer3-8 dme-miR-14-3p X - 11563091 11563151 3'utr RpII215 FlyBase G50202.1 ACTGTATGAAATTGTTTACTAACTGGAAGACTCTTGTCACTCTTCTGCAAAGTACTTTCAC 9 11563139 0.984892293 7 9 71 1 1.079181246 0.166666667 0.333333333 0.5 9 0 0 12 X:11563091-11563151 6 10 3768 FBgn0003277 4688.79 83.91 128.7166667 0.002132746 0.119175307 0.077690017 -15 14 -0.5 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG X 11605490 11605495 + X_11605490_11605495_+ 0.999804493 0.999932893 0.999868693 9.08E-05 rho-4 FBtr0073518|FBtr0073519 11605445|11605445 11606288|11606000 X + 11605469 11605506 3'utr rho-4 FlyBase G60633.1 AGCCCTAACCCTTAACCATGTCCAAAGTGCACTTCGAT 11 11605487 0.673163228 4 9 59 0.916666667 0.740362689 0.166666667 0.090909091 0.166666667 11 0 1 11 X:11605469-11605506 6 rho-4 FBtr0073519|FBtr0073518 11605445|11605445 11606000|11606288 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" X + 11605438 11605524 stop_codon rho-4 FlyBase G45810.1 TACAACTAGCCCCATCACTAGCTCTAGCCCTAGCCCTAACCCTTAACCATGTCCAAAGTGCACTTCGATATTGAGCCGAGGTTGCAG 15 11605487 0.960185433 9 14 66 0.96 1.380211242 0.2 0.6 0.76 15 1 0 24 X:11605438-11605524 6 9 3769 FBgn0030318 1970.58 111.7533333 171.94 0.004567183 0.080534511 0.052343841 3 3 3 0.15 dme-miR-305-3p 7mer-m8 ATGTGCC X 11605560 11605566 + X_11605560_11605566_+ 0.674511627 0.666413993 0.67046281 0.005725868 rho-4 FBtr0073518|FBtr0073519 11605445|11605445 11606288|11606000 X + 11605526 11605582 3'utr rho-4 FlyBase G60634.1 ACGCACAGTACTATATATAGGATTTCTTCTGACCATGTGCCTATGCCAGCTGCAAAA 6 11605561 0.977025278 4 6 40 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 X:11605526-11605582 7 rho-4 FBtr0073519|FBtr0073518 11605445|11605445 11606000|11606288 ATGTGCC 7mer-m8 dme-miR-305-3p X + 11605535 11605573 3'utr rho-4 FlyBase G45811.1 ACTATATATAGGATTTCTTCTGACCATGTGCCTATGCCA 8 11605552 0.64287683 3 8 74 1 1.041392685 0.636363636 0.125 0.363636364 8 0 0 11 X:11605535-11605573 7 6.5 3770 FBgn0030318 1970.58 111.7533333 171.94 0.003298521 0.058163813 0.037803885 -1 8 3.5 0.15 dme-miR-14-3p 8mer-A1 AAGACTGA X 11606698 11606705 - X_11606698_11606705_- 0.643328168 0.643406673 0.64336742 5.55E-05 CG2247 FBtr0306133|FBtr0306135|FBtr0073536|FBtr0306134 11606492|11606492|11606288|11606492 11606782|11606782|11606782|11606782 X - 11606667 11606774 3'utr CG2247 FlyBase G66713.1 AACGCACTAGTTATTCCTAGGTGCCATAAGTTAGCTCATATATAAGCCCTCCCAGTAGCAGAGAATGCCAAGACTGAGTCTTCTCGAGAAGCATCACCTCCGAACACC 118 11606709 0.874134005 12 98 581 0.810218978 1.568201724 0.160583942 0.144067797 0.262773723 118 24 2 111 X:11606667-11606774 8 CG2247 FBtr0073536|FBtr0306134|FBtr0306133|FBtr0306135 11606288|11606492|11606492|11606492 11606782|11606782|11606782|11606782 AAGACTGA 8mer-A1 dme-miR-14-3p X - 11606680 11606735 3'utr CG2247 FlyBase G50238.1 ATATAAGCCCTCCCAGTAGCAGAGAATGCCAAGACTGAGTCTTCTCGAGAAGCATC 81 11606709 0.875378357 6 60 402 0.736 1.486666573 0.152 0.395061728 0.608 81 31 2 92 X:11606680-11606735 8 89.5 3771 FBgn0030320 921.3333333 30.09666667 46.31666667 0.097141823 2.973751246 1.932349766 4 4 4 0.15 dme-miR-308-3p 7mer-m1 TGTGATT X 11619662 11619668 + X_11619662_11619668_+ 0.34443623 0.506272451 0.425354341 0.114435545 Met FBtr0073521|FBtr0343585 11619086|11619086 11619948|11621280 X + 11619639 11619685 3'utr Met FlyBase G60658.1 ATTTGGCCATTACTGTTTCTGTGTGTGATTTCGGTATAAAATAGTAG 36 11619668 0.777012262 7 35 385 0.975609756 1.301029996 0.317073171 0.111111111 0.219512195 36 0 1 40 X:11619639-11619685 7 Met FBtr0073521|FBtr0343585 11619086|11619086 11619948|11621280 TGTGATT 7mer-m1 dme-miR-308-3p X + 11619647 11619709 3'utr Met FlyBase G45822.1 ATTACTGTTTCTGTGTGTGATTTCGGTATAAAATAGTAGTTTGATTACATGTTATATTGATGA 27 11619668 0.990764224 6 26 280 1 1.612783857 0.219512195 0.296296296 0.536585366 27 0 0 41 X:11619647-11619709 7 29 3772 FBgn0002723 512 15.22666667 23.33666667 0.056640625 1.904553415 1.242679617 -6 -6 -6 0.15 dme-miR-79-3p 7mer-A1 AGCTTTA X 11620312 11620318 + X_11620312_11620318_+ 0.545672952 0.448415321 0.497044137 0.068771579 Met FBtr0343585 11619086 11621280 X + 11620282 11620327 3'utr Met FlyBase G60662.1 TTTGTAATCTATAAAAACACTTCCAGGCGCAGCTTTATTTTTCAAC 14 11620316 0.974252173 3 14 91 1 1.204119983 0 0.142857143 0.25 14 0 0 16 X:11620282-11620327 7 Met FBtr0343585 11619086 11621280 AGCTTTA 7mer-A1 dme-miR-79-3p X + 11620290 11620327 3'utr Met FlyBase G45825.1 CTATAAAAACACTTCCAGGCGCAGCTTTATTTTTCAAC 17 11620316 0.731283777 2 16 113 0.964285714 1.431363764 0 0.411764706 0.642857143 17 1 0 27 X:11620290-11620327 7 15 3773 FBgn0002723 512 15.22666667 23.33666667 0.029296875 0.985113835 0.642765319 -4 -4 -4 0.15 dme-miR-980-3p 6mer3-8 GGCAGC X 11693663 11693668 + X_11693663_11693668_+ 0.940896935 0.93482618 0.937861557 0.004292633 bif FBtr0334464|FBtr0073527|FBtr0334465 11689550|11692808|11691412 11694740|11694740|11694740 X + 11693641 11693804 3'utr bif FlyBase G60701.1 CAGCAGCAGTGGGAGCAGCAATGGCAGCCACAGTCCAGGCAGCAACGGGAGCAGTCCAGCCGGAGCTGCGGGCAGCCGGTTGATGTTCAACGGGAATGGCAGCATTATGGGCATCGGCGAGGGACTGATCAAGGAGGGCGACTTGGCGGCAACGGAAGCAGGAC 63 11693662 0.999821232 13 60 180 0.96 1.857332496 0.373333333 0.126984127 0.266666667 63 3 0 72 X:11693641-11693804 6 bif FBtr0334465|FBtr0334464|FBtr0073527 11691412|11689550|11692808 11694740|11694740|11694740 GGCAGC 6mer3-8 dme-miR-980-3p X + 11693642 11693856 3'utr bif FlyBase G45853.1 AGCAGCAGTGGGAGCAGCAATGGCAGCCACAGTCCAGGCAGCAACGGGAGCAGTCCAGCCGGAGCTGCGGGCAGCCGGTTGATGTTCAACGGGAATGGCAGCATTATGGGCATCGGCGAGGGACTGATCAAGGAGGGCGACTTGGCGGCAACGGAAGCAGGACCTGGAACTGCAGATGGAGCAGGTGCCTCCAAGAAGGGTTCAGCTGTGGACGA 39 11693662 0.952141623 16 37 108 0.950819672 1.763427994 0.393442623 0.333333333 0.573770492 39 3 0 58 X:11693642-11693856 6 13 3774 FBgn0014133 2033.663333 48.19333333 73.77666667 0.006392405 0.269746853 0.176207473 1 1 1 0.15 dme-miR-980-3p 6mer3-8 GGCAGC X 11693738 11693743 + X_11693738_11693743_+ 0.999624542 0.999999932 0.999812237 0.000265448 bif FBtr0334464|FBtr0073527|FBtr0334465 11689550|11692808|11691412 11694740|11694740|11694740 X + 11693641 11693804 3'utr bif FlyBase G60701.1 CAGCAGCAGTGGGAGCAGCAATGGCAGCCACAGTCCAGGCAGCAACGGGAGCAGTCCAGCCGGAGCTGCGGGCAGCCGGTTGATGTTCAACGGGAATGGCAGCATTATGGGCATCGGCGAGGGACTGATCAAGGAGGGCGACTTGGCGGCAACGGAAGCAGGAC 63 11693737 0.999821232 13 60 180 0.96 1.857332496 0.373333333 0.126984127 0.266666667 63 3 0 72 X:11693641-11693804 6 bif FBtr0334465|FBtr0334464|FBtr0073527 11691412|11689550|11692808 11694740|11694740|11694740 GGCAGC 6mer3-8 dme-miR-980-3p X + 11693642 11693856 3'utr bif FlyBase G45853.1 AGCAGCAGTGGGAGCAGCAATGGCAGCCACAGTCCAGGCAGCAACGGGAGCAGTCCAGCCGGAGCTGCGGGCAGCCGGTTGATGTTCAACGGGAATGGCAGCATTATGGGCATCGGCGAGGGACTGATCAAGGAGGGCGACTTGGCGGCAACGGAAGCAGGACCTGGAACTGCAGATGGAGCAGGTGCCTCCAAGAAGGGTTCAGCTGTGGACGA 39 11693737 0.952141623 16 37 108 0.950819672 1.763427994 0.393442623 0.333333333 0.573770492 39 3 0 58 X:11693642-11693856 6 18 3775 FBgn0014133 2033.663333 48.19333333 73.77666667 0.008851023 0.373495643 0.243979578 1 1 1 0.15 dme-miR-305-5p 6mer2-7 GTACAA X 11694230 11694235 + X_11694230_11694235_+ 0.767561173 0.479127394 0.623344283 0.203953496 bif FBtr0334464|FBtr0073527|FBtr0334463|FBtr0334465|FBtr0073526 11689550|11692808|11693937|11691412|11693937 11694740|11694740|11694740|11694740|11694740 X + 11694210 11694265 3'utr bif FlyBase G60705.1 TAGAGATCCGATGTGTATGTGTACAACAGCAAGCGTGTGTGTCTGTCTTCTTTATA 38 11694228 0.650923563 11 36 280 0.934782609 1.633468456 0.130434783 0.210526316 0.347826087 38 3 0 43 X:11694210-11694265 6 bif FBtr0073526|FBtr0334463|FBtr0334465|FBtr0334464|FBtr0073527 11693937|11693937|11691412|11689550|11692808 11694740|11694740|11694740|11694740|11694740 GTACAA 6mer2-7 dme-miR-305-5p X + 11694212 11694263 3'utr bif FlyBase G45857.1 GAGATCCGATGTGTATGTGTACAACAGCAAGCGTGTGTGTCTGTCTTCTTTA 15 11694252 0.693989373 7 13 107 0.92 1.06069784 0.12 0.4 0.64 15 1 1 23 X:11694212-11694263 6 10 3776 FBgn0014133 2033.663333 48.19333333 73.77666667 0.004917235 0.207497579 0.13554421 2 -22 -10 0.15 dme-miR-7-5p 6mer3-8 GTCTTC X 11694254 11694259 + X_11694254_11694259_+ 0.821919296 0.927527305 0.874723301 0.074676133 bif FBtr0334464|FBtr0073527|FBtr0334463|FBtr0334465|FBtr0073526 11689550|11692808|11693937|11691412|11693937 11694740|11694740|11694740|11694740|11694740 X + 11694210 11694265 3'utr bif FlyBase G60705.1 TAGAGATCCGATGTGTATGTGTACAACAGCAAGCGTGTGTGTCTGTCTTCTTTATA 38 11694228 0.650923563 11 36 280 0.934782609 1.633468456 0.130434783 0.210526316 0.347826087 38 3 0 43 X:11694210-11694265 6 bif FBtr0073526|FBtr0334463|FBtr0334465|FBtr0334464|FBtr0073527 11693937|11693937|11691412|11689550|11692808 11694740|11694740|11694740|11694740|11694740 GTCTTC 6mer3-8 dme-miR-7-5p X + 11694212 11694263 3'utr bif FlyBase G45857.1 GAGATCCGATGTGTATGTGTACAACAGCAAGCGTGTGTGTCTGTCTTCTTTA 15 11694252 0.693989373 7 13 107 0.92 1.06069784 0.12 0.4 0.64 15 1 1 23 X:11694212-11694263 6 8 3777 FBgn0014133 2033.663333 48.19333333 73.77666667 0.003933788 0.165998063 0.108435368 26 2 14 0.15 dme-miR-308-3p 7mer-m1 TGTGATT X 11704012 11704018 + X_11704012_11704018_+ 0.469693227 0.520958855 0.495326041 0.036250324 PhKgamma FBtr0301501|FBtr0301500|FBtr0090002|FBtr0343587|FBtr0343648 11703642|11703642|11703642|11703642|11703642 11704394|11704394|11704394|11704394|11704394 X + 11703983 11704039 3'utr PhKgamma FlyBase G60721.1 AACATTACCTCCCCTGCCTTCTTCGTCCTTGTGATTTTGTTTAATACTTTTTAATTC 99 11704018 0.686928454 10 94 1183 0.938596491 1.427323786 0.263157895 0.111111111 0.228070175 99 4 3 107 X:11703983-11704039 7 PhKgamma FBtr0343648|FBtr0343587|FBtr0090002|FBtr0301500|FBtr0301501 11703642|11703642|11703642|11703642|11703642 11704394|11704394|11704394|11704394|11704394 TGTGATT 7mer-m1 dme-miR-308-3p X + 11703984 11704030 3'utr PhKgamma FlyBase G45868.1 ACATTACCTCCCCTGCCTTCTTCGTCCTTGTGATTTTGTTTAATACT 85 11704018 0.660804767 12 84 982 0.991935484 1.788875116 0.282258065 0.294117647 0.516129032 85 0 1 123 X:11703984-11704030 7 82 3778 FBgn0011754 327.82 14.47333333 22.3 0.25013727 5.665591893 3.677130045 -6 -6 -6 0.15 dme-miR-184-5p 7mer-m8 TGATAAG X 11719788 11719794 + X_11719788_11719794_+ 0.590320404 0.63493194 0.612626172 0.031545094 prtp FBtr0332954|FBtr0303335|FBtr0303334|FBtr0073551 11719487|11719487|11719487|11719487 11719894|11719894|11719894|11719894 X + 11719746 11719809 3'utr prtp FlyBase G60733.1 GTTTAGTGTTTACGTAAATGGGGCACGGGACTGTGTGCGCGATGATAAGCCATTTAGCGAACTT 10 11719764 0.922568538 6 10 43 1 1.041392685 0.636363636 0.1 0.181818182 10 0 0 11 X:11719746-11719809 7 prtp FBtr0332954|FBtr0303335|FBtr0303334|FBtr0073551 11719487|11719487|11719487|11719487 11719894|11719894|11719894|11719894 TGATAAG 7mer-m8 dme-miR-184-5p X + 11719749 11719804 3'utr prtp FlyBase G45874.1 TAGTGTTTACGTAAATGGGGCACGGGACTGTGTGCGCGATGATAAGCCATTTAGCG 10 11719780 0.930254692 5 10 39 1 1.230448921 0.352941176 0.5 0.705882353 10 0 0 17 X:11719749-11719804 7 3 3779 FBgn0030329 624.6666667 43.55666667 66.86666667 0.004802561 0.068875794 0.044865404 24 8 16 0.15 dme-miR-14-3p 7mer-A1 AGACTGA X 11723711 11723717 + X_11723711_11723717_+ 0.819880886 0.819850767 0.819865826 2.13E-05 Tango10 FBtr0073553|FBtr0332955|FBtr0073552 11722787|11722787|11722787 11723854|11723854|11723854 X + 11723634 11723779 3'utr Tango10 FlyBase G60749.1 TTGGCGTTAATGTAGTTGTTAAATAAAATGTCTCTTCAAAAATCAGCTGTGGTCTATTATTATTATGCGTTTTCATTAGACTGAACTAAAGAGTGTAGAATTACTGTCATTTAACGATATAATTTAGTGATTTCGGTTTTAATTAA 522 11723709 0.914210113 25 504 4182 0.968944099 1.95008655 0.046583851 0.185823755 0.340062112 522 14 6 624 X:11723634-11723779 7 Tango10 FBtr0073552|FBtr0332955|FBtr0073553 11722787|11722787|11722787 11723854|11723854|11723854 AGACTGA 7mer-A1 dme-miR-14-3p X + 11723657 11723821 3'utr Tango10 FlyBase G45886.1 TAAAATGTCTCTTCAAAAATCAGCTGTGGTCTATTATTATTATGCGTTTTCATTAGACTGAACTAAAGAGTGTAGAATTACTGTCATTTAACGATATAATTTAGTGATTTCGGTTTTAATTAAATTATTGCCTAACGTTGACCAGTCATTTTGTAAAATAACGTC 395 11723709 0.892218729 20 384 2984 0.976950355 1.963000348 0.044326241 0.293670886 0.505319149 395 8 5 551 X:11723657-11723821 7 378 3780 FBgn0030330 148.3733333 5.923333333 9.083333333 2.547627606 63.81541925 41.6146789 2 2 2 0.15 dme-miR-308-3p 7mer-m1 TGTGATT X 11763492 11763498 - X_11763492_11763498_- 0.443130945 0.443131 0.443130972 7.07E-08 CG9360 FBtr0073613 11763472 11763643 X - 11763483 11763513 3'utr CG9360 FlyBase G66763.1 ATGTACCAAACGTTATGTGATTAAAATTCTT 25 11763501 0.694579367 4 22 174 0.884615385 1.361727836 0.115384615 0.04 0.076923077 25 3 0 23 X:11763483-11763513 7 CG9360 FBtr0073613 11763472 11763643 TGTGATT 7mer-m1 dme-miR-308-3p X - 11763483 11763516 3'utr CG9360 FlyBase G50276.1 TGCATGTACCAAACGTTATGTGATTAAAATTCTT 15 11763501 0.700413501 3 15 110 1 1.361727836 0.086956522 0.466666667 0.652173913 15 0 0 23 X:11763483-11763516 7 19.5 3781 FBgn0030332 279 33.07666667 49.99 0.069892473 0.589539454 0.390078016 3 3 3 0.15 dme-miR-980-3p 6mer3-8 GGCAGC X 11796942 11796947 + X_11796942_11796947_+ 0.999313647 0.998117976 0.998715811 0.000845417 CkIIbeta FBtr0073558|FBtr0307896|FBtr0333204 11795608|11795608|11796668 11797924|11797301|11797565 X + 11796910 11796973 5'utr CkIIbeta FlyBase G60768.1 AAGGATGTGGATCGAAGAAGAGGATGAAGATTGGCAGCAGGACACGAGCAACGAACCGAACGAA 50 11796941 0.786101956 3 49 97 0.949152542 1.748188027 0.186440678 0.16 0.288135593 50 3 0 56 X:11796910-11796973 6 CkIIbeta FBtr0333204|FBtr0073558|FBtr0307896 11796668|11795608|11795608 11797565|11797924|11797301 GGCAGC 6mer3-8 dme-miR-980-3p X + 11796918 11796969 5'utr CkIIbeta FlyBase G45906.1 GGATCGAAGAAGAGGATGAAGATTGGCAGCAGGACACGAGCAACGAACCGAA 36 11796941 0.785545432 3 35 64 0.982142857 1.740362689 0.196428571 0.388888889 0.607142857 36 1 0 55 X:11796918-11796969 6 43 3782 FBgn0000259 3146.093333 305.1066667 469.0433333 0.013667745 0.140934318 0.091675965 1 1 1 0.15 dme-miR-2a-2-5p 8mer-A1 TGATGAGA X 11801933 11801940 - X_11801933_11801940_- 0.557720354 0.596256605 0.576988479 0.027249208 Hsc70-3 FBtr0073609|FBtr0345166|FBtr0073608|FBtr0073610|FBtr0073611 11801694|11801694|11801694|11801694|11801694 11802612|11802612|11802612|11802612|11802612 X - 11801874 11801969 3'utr Hsc70-3 FlyBase G66766.1 ATATATCGGGGAATCGGACTGTATTGTATTGATGAGATATAGAAGAAAGAGAGAGAGAGAGGAGCCAGGGAGCTGCGGGTCGTGCGGAGGAGGAGA 45 11801930 0.961533878 10 43 216 0.962962963 1.238882089 0.240740741 0.133333333 0.277777778 45 0 2 52 X:11801874-11801969 8 Hsc70-3 FBtr0073610|FBtr0073608|FBtr0345166|FBtr0073609|FBtr0073611 11801694|11801694|11801694|11801694|11801694 11802612|11802612|11802612|11802612|11802612 TGATGAGA 8mer-A1 dme-miR-2a-2-5p X - 11801768 11801970 3'utr Hsc70-3 FlyBase G50278.1 AATATATCGGGGAATCGGACTGTATTGTATTGATGAGATATAGAAGAAAGAGAGAGAGAGAGGAGCCAGGGAGCTGCGGGTCGTGCGGAGGAGGAGAATAGGTCGATGAGGAATGGGAACGGCAGAAGAGCAAGAGATAAACCACGAAATCATACGGAAACCACTAGAGAGCAGCGGCACACAACATCGGCCAGGCTTCATAA 46 11801939 0.999950049 18 36 174 0.823529412 1.748188027 0.191176471 0.347826087 0.558823529 46 12 0 56 X:11801768-11801970 8 26 3783 FBgn0001218 13055.07 506.7333333 774.0533333 0.001991563 0.051309038 0.033589417 -10 -1 -5.5 0.15 dme-miR-14-3p 7mer-A1 AGACTGA X 11802532 11802538 - X_11802532_11802538_- 0.807091091 0.797494523 0.802292807 0.006785821 Hsc70-3 FBtr0073609|FBtr0345166|FBtr0073608|FBtr0073610|FBtr0073611 11801694|11801694|11801694|11801694|11801694 11802612|11802612|11802612|11802612|11802612 X - 11802480 11802597 3'utr Hsc70-3 FlyBase G66770.1 CTCACATAACTTACACACAGCCCAGCCTGCATCCATTCGAGATCATAGTGTTGGAATTCAGACTGAAAAAAAAAACAATTATAACTTAATTGCAAACGCAGTAGCCACAACAACAACA 1692 11802541 0.962294804 18 1612 8797 0.951461119 1.792165671 0.326399208 0.153664303 0.290737989 1692 68 30 1921 X:11802480-11802597 7 Hsc70-3 FBtr0073610|FBtr0073608|FBtr0345166|FBtr0073609|FBtr0073611 11801694|11801694|11801694|11801694|11801694 11802612|11802612|11802612|11802612|11802612 AGACTGA 7mer-A1 dme-miR-14-3p X - 11802483 11802602 3'utr Hsc70-3 FlyBase G50282.1 CCCCCCTCACATAACTTACACACAGCCCAGCCTGCATCCATTCGAGATCATAGTGTTGGAATTCAGACTGAAAAAAAAAACAATTATAACTTAATTGCAAACGCAGTAGCCACAACAACA 1303 11802541 0.815950152 19 1256 6595 0.961621622 1.818812184 0.318918919 0.324635457 0.524324324 1303 45 26 1779 X:11802483-11802602 7 1440 3784 FBgn0001218 13055.07 506.7333333 774.0533333 0.110301975 2.841731351 1.860336928 3 3 3 0.15 dme-miR-308-3p 7mer-m1 TGTGATT X 11833432 11833438 + X_11833432_11833438_+ 0.521222966 0.521222726 0.521222846 2.12E-07 rudhira FBtr0305606 11832923 11834386 X + 11833402 11833456 3'utr rudhira FlyBase G60795.1 AAAACAAAACACAAAACTCTGCAAAAAAATTGTGATTTATCGAAAAGAAAAACAA 157 11833431 0.97909335 6 154 1074 0.985294118 1.826074803 0.200980392 0.248407643 0.421568627 157 1 2 201 X:11833402-11833456 7 rudhira FBtr0305606 11832923 11834386 TGTGATT 7mer-m1 dme-miR-308-3p X + 11833406 11833453 3'utr rudhira FlyBase G45916.1 CAAAACACAAAACTCTGCAAAAAAATTGTGATTTATCGAAAAGAAAAA 102 11833432 0.779517959 4 97 694 0.958333333 1.537819095 0.222222222 0.323529412 0.520833333 102 3 3 138 X:11833406-11833453 7 128.5 3785 FBgn0266019 2080.863333 30.08666667 46.56 0.061753215 4.270994904 2.759879725 1 0 0.5 0.15 dme-miR-980-3p 7mer-A1 GCAGCTA X 11833902 11833908 + X_11833902_11833908_+ 0.820243945 0.820843529 0.820543737 0.000423981 rudhira FBtr0305606 11832923 11834386 X + 11833883 11833934 3'utr rudhira FlyBase G60798.1 CACACACACACACACACATGCAGCTAAAGCTGTTTGCAGAACACACAGTTGG 19 11833901 0.997671864 3 19 32 1 1.322219295 0.523809524 0.105263158 0.19047619 19 0 0 21 X:11833883-11833934 7 rudhira FBtr0305606 11832923 11834386 GCAGCTA 7mer-A1 dme-miR-980-3p X + 11833886 11833927 3'utr rudhira FlyBase G45918.1 ACACACACACACACATGCAGCTAAAGCTGTTTGCAGAACACA 15 11833901 0.998622171 4 15 38 1 1.361727836 0.260869565 0.466666667 0.652173913 15 0 0 23 X:11833886-11833927 7 13.5 3786 FBgn0266019 2080.863333 30.08666667 46.56 0.006487692 0.448703745 0.289948454 1 1 1 0.15 dme-miR-1002-5p 7mer-m8 CTACTTA X 11836035 11836041 + X_11836035_11836041_+ 0.341894644 0.38457378 0.363234212 0.030178752 rudhira FBtr0305605 11835262 11837460 X + 11836011 11836083 3'utr rudhira FlyBase G60808.1 TATGTAATAGCATAATAGCTCCATCTACTTACCCTAGACTAAAGAAGCCCAAATTTCGCTTATTTTTCCAACT 20 11836064 0.983612219 7 17 133 0.875 0.84509804 0.083333333 0.15 0.291666667 20 1 2 21 X:11836011-11836083 7 rudhira FBtr0305605 11835262 11837460 CTACTTA 7mer-m8 dme-miR-1002-5p X + 11836031 11836066 3'utr rudhira FlyBase G45925.1 CCATCTACTTACCCTAGACTAAAGAAGCCCAAATTT 6 11836035 0.869792899 4 5 28 0.909090909 0.698970004 0.272727273 0.5 0.727272727 6 0 1 10 X:11836031-11836066 7 8 3787 FBgn0266019 2080.863333 30.08666667 46.56 0.003844558 0.265898515 0.171821306 -29 0 -14.5 0.15 dme-bantam-3p 6mer3-8 TGATCT X 11836603 11836608 + X_11836603_11836608_+ 0.913422917 0.931357418 0.922390167 0.012681607 rudhira FBtr0305605 11835262 11837460 X + 11836573 11836635 3'utr rudhira FlyBase G60811.1 TATATATATTTTTTTATAAACGTTGAACGATGATCTACACATTTATATATTATAGATGAGCAT 27 11836603 0.889810243 2 25 200 0.939393939 1.491361694 0 0.222222222 0.363636364 27 2 0 31 X:11836573-11836635 6 rudhira FBtr0305605 11835262 11837460 TGATCT 6mer3-8 dme-bantam-3p X + 11836590 11836640 3'utr rudhira FlyBase G45926.1 AAACGTTGAACGATGATCTACACATTTATATATTATAGATGAGCATACTAA 22 11836603 0.909966578 4 21 137 1 1.431363764 0.148148148 0.181818182 0.333333333 22 0 0 27 X:11836590-11836640 6 23 3788 FBgn0266019 2080.863333 30.08666667 46.56 0.011053105 0.764458232 0.493986254 0 0 0 0.15 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA X 11837104 11837110 + X_11837104_11837110_+ 0.802884414 0.807294444 0.805089429 0.003118341 rudhira FBtr0305605|FBtr0305605 11835262|11835262 11837460|11837460 X + 11837072 11837130 3'utr rudhira FlyBase G60815.1 AGACATATAGATACGCAAATTGGCAGAACATTTACTTAAAACCCATACCTAAATATATG 26 11837102 0.795662072 6 25 150 0.965517241 1.146128036 0.068965517 0.115384615 0.206896552 26 0 1 28 X:11837072-11837130 7 rudhira FBtr0305605|FBtr0305605 11835262|11835262 11837460|11837460 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" X + 11837080 11837118 3'utr rudhira FlyBase G45929.1 AGATACGCAAATTGGCAGAACATTTACTTAAAACCCATA 10 11837102 0.910907485 3 10 49 1 1.146128036 0 0.2 0.428571429 10 0 0 14 X:11837080-11837118 7 15 3789 FBgn0266019 2080.863333 30.08666667 46.56 0.007208546 0.498559716 0.322164948 2 2 2 0.15 dme-miR-283-5p 6mer3-8 TGATAT X 11864981 11864986 - X_11864981_11864986_- 0.99999996 0.999965878 0.999982919 2.41E-05 CG2025 FBtr0073601 11864649 11865104 X - 11864971 11865031 3'utr CG2025 FlyBase G66823.1 GCCAAAGGTAGACGATTAGTTACACAGGAAGCAACCTTTTTCTCATGATATCCTCCTGACC 12 11864993 0.990955716 7 10 81 0.857142857 1.079181246 0.214285714 0.166666667 0.285714286 12 2 0 12 X:11864971-11865031 6 CG2025 FBtr0073601 11864649 11865104 TGATAT 6mer3-8 dme-miR-283-5p X - 11864949 11864993 3'utr CG2025 FlyBase G50323.1 TTTCTCATGATATCCTCCTGACCAAGTCGGGAATTTGCTCTTATG 5 11864992 0.954531376 3 4 41 0.8 0.602059991 0 0 0 5 1 0 4 X:11864949-11864993 6 6 3790 FBgn0030344 443.1533333 13.33 20.59 0.013539332 0.450112528 0.291403594 7 6 6.5 0.15 dme-miR-283-5p 7mer-m1 GATATTT X 11870950 11870956 + X_11870950_11870956_+ 0.764827167 0.754721001 0.759774084 0.007146163 CG1847 FBtr0330413|FBtr0073567 11870497|11870431 11871168|11871168 X + 11870932 11870974 3'utr CG1847 FlyBase G60830.1 TTGTATATCCCTATATGCGATATTTACTCGTAGCTAGAATCTA 17 11870945 0.78826669 5 17 164 1 1.397940009 0.12 0.352941176 0.56 17 0 0 25 X:11870932-11870974 7 CG1847 FBtr0330413|FBtr0073567 11870497|11870431 11871168|11871168 GATATTT 7mer-m1 dme-miR-283-5p X + 11870890 11870965 3'utr CG1847 FlyBase G45938.2 CACATTTGTTGTCCATAGTCGTATATGTATGTTTGTATTGTATTGTATATCCCTATATGCGATATTTACTCGTAGC 21 11870945 0.813196203 5 16 202 0.827586207 1.380211242 0.103448276 0.333333333 0.517241379 21 5 0 24 X:11870890-11870965 7 15 3791 FBgn0030345 101 6.976666667 10.73666667 0.148514851 2.150023889 1.397081652 5 5 5 0.15 dme-miR-305-3p 7mer-m1 TGTGCCG X 11877805 11877811 - X_11877805_11877811_- 0.80690143 0.708488077 0.757694753 0.069588712 CG10353 FBtr0331591|FBtr0331594|FBtr0344702|FBtr0114451|FBtr0308070|FBtr0114452|FBtr0344703 11877735|11877735|11877735|11877735|11877735|11877735|11877735 11878742|11878742|11878742|11878742|11878742|11878742|11878742 X - 11877793 11877827 3'utr CG10353 FlyBase G66853.1 AAAACAAATTGTGTTGTGTGCCGGATAAAAAAAAA 10 11877810 0.717539577 5 10 62 1 1.041392685 0.181818182 0.1 0.181818182 10 0 0 11 X:11877793-11877827 7 CG10353 FBtr0344702|FBtr0331594|FBtr0331591|FBtr0344703|FBtr0114452|FBtr0308070|FBtr0114451 11877735|11877735|11877735|11877735|11877735|11877735|11877735 11878742|11878742|11878742|11878742|11878742|11878742|11878742 TGTGCCG 7mer-m1 dme-miR-305-3p X - 11877795 11877826 3'utr CG10353 FlyBase G50343.1 AAACAAATTGTGTTGTGTGCCGGATAAAAAAA 5 11877812 0.662485519 3 5 35 1 0.903089987 0 0.6 0.75 5 0 0 8 X:11877795-11877826 7 7.5 3792 FBgn0030349 1118.516667 30.53 46.76333333 0.006705309 0.245660007 0.160382066 -1 1 0 0.15 dme-miR-11-3p 8mer-m1 CTGTGATG X 11889011 11889018 + X_11889011_11889018_+ 0.462272508 0.46227407 0.462273289 1.13E-06 CG1840 FBtr0073571|FBtr0331590 11888967|11888967 11889186|11889186 X + 11888997 11889035 3'utr CG1840 FlyBase G60837.2 AATCCAACTCACCTCTGTGATGCGGCAATTAAAATAGAT 20 11889010 0.797048552 4 15 96 0.814814815 1.041392685 0.259259259 0.2 0.407407407 20 4 1 22 X:11888997-11889035 8 CG1840 FBtr0073571|FBtr0331590 11888967|11888967 11889186|11889186 CTGTGATG 8mer-m1 dme-miR-11-3p X + 11888997 11889026 3'utr CG1840 FlyBase G45942.1 AATCCAACTCACCTCTGTGATGCGGCAATT 19 11889010 0.67823952 4 14 101 0.740740741 1.301029996 0.185185185 0.315789474 0.518518519 19 7 0 20 X:11888997-11889026 8 19 3793 FBgn0030351 18.33333333 3.326666667 5.123333333 1.036363636 5.711422846 3.708523097 1 1 1 0.15 dme-miR-184-3p 8mer-A1 TCCGTCCA X 11907593 11907600 - X_11907593_11907600_- 0.630966744 0.63104782 0.631007282 5.73E-05 pot FBtr0073595|FBtr0305609 11907407|11907407 11908579|11908579 X - 11907574 11907650 3'utr pot FlyBase G66883.1 TACGATATACTTTCTCATGATAATCAATTTTCGCGTAACATTAGTACTAATCCGTCCAAGACATATACTATAAGTTT 79 11907602 0.78841305 10 71 591 0.905263158 1.33243846 0.210526316 0.151898734 0.294736842 79 6 3 86 X:11907574-11907650 8 pot FBtr0305609|FBtr0073595 11907407|11907407 11908579|11908579 TCCGTCCA 8mer-A1 dme-miR-184-3p X - 11907574 11907649 3'utr pot FlyBase G50359.1 ACGATATACTTTCTCATGATAATCAATTTTCGCGTAACATTAGTACTAATCCGTCCAAGACATATACTATAAGTTT 62 11907604 0.75493953 7 57 431 0.91011236 1.607455023 0.269662921 0.322580645 0.528089888 62 7 1 81 X:11907574-11907649 8 46 3794 FBgn0250871 1 0.03 0.05 46 1533.333333 920 2 4 3 0.15 dme-miR-308-3p 7mer-m1 TGTGATT X 12023151 12023157 - X_12023151_12023157_- 0.521222096 0.516673664 0.51894788 0.003216204 Usp7 FBtr0073641 12022835 12024307 X - 12023099 12023208 3'utr Usp7 FlyBase G66898.1 AGGCGTATGTATGGGAGATGAAAAATATAAGATTTGTTTCAAACAATTATTTGTGATTTTTAAACATGAAATGATAAAAATGTATGCAAAGGACTAGACAACATAAAATT 107 12023159 0.87340866 16 105 935 0.9765625 1.619788758 0.171875 0.168224299 0.3046875 107 1 2 125 X:12023099-12023208 7 Usp7 FBtr0073641 12022835 12024307 TGTGATT 7mer-m1 dme-miR-308-3p X - 12023087 12023202 3'utr Usp7 FlyBase G50369.1 ATGTATGGGAGATGAAAAATATAAGATTTGTTTCAAACAATTATTTGTGATTTTTAAACATGAAATGATAAAAATGTATGCAAAGGACTAGACAACATAAAATTAATTAATAAATT 59 12023159 0.918033586 14 59 461 1 1.949390007 0.06741573 0.389830508 0.595505618 59 0 0 89 X:12023087-12023202 7 46 3795 FBgn0030366 4316.233333 92.58333333 142.4366667 0.010657441 0.496849685 0.322950551 2 2 2 0.15 dme-miR-304-5p 6mer2-7 GAGATT X 1217114 1217119 - X_1217114_1217119_- 0.629308124 0.780351963 0.704830043 0.106804166 CG3638 FBtr0070249|FBtr0330206|FBtr0330207|FBtr0346960|FBtr0336978 1215712|1217081|1217081|1217081|1215287 1221459|1219704|1221459|1221459|1221459 X - 1217101 1217157 3'utr CG3638 FlyBase G63956.1 ACGGATCAGTTGTGGAAGAAATAATTGTAGTGCCATTAGAGATTGGAAAATTGAATA 8 1217122 0.972666833 6 8 51 1 0.954242509 0.222222222 0.125 0.222222222 8 0 0 9 X:1217101-1217157 6 CG3638 FBtr0346960|FBtr0336978|FBtr0330207|FBtr0330206|FBtr0070249 1217081|1215287|1217081|1217081|1215712 1221459|1221459|1221459|1219704|1221459 GAGATT 6mer2-7 dme-miR-304-5p X - 1217109 1217136 3'utr CG3638 FlyBase G48212.1 TAATTGTAGTGCCATTAGAGATTGGAAA 5 1217121 0.796256637 3 5 34 1 0.903089987 0 0.6 0.75 5 0 0 8 X:1217109-1217136 6 5 3796 FBgn0261444 352.62 5.606666667 8.55 0.01417957 0.891795482 0.584795322 3 2 2.5 0.15 dme-miR-278-3p 6mer3-8 CCCACC X 1220356 1220361 - X_1220356_1220361_- 0.995221803 0.997219871 0.996220837 0.00141287 CG3638 FBtr0070249|FBtr0308707|FBtr0330207|FBtr0346960|FBtr0336978 1215712|1217947|1217081|1217081|1215287 1221459|1221459|1221459|1221459|1221459 X - 1220330 1220399 3'utr CG3638 FlyBase G63959.1 ATCCCGCCTCCATTGTGAACCAACCGTTGCCCGAGATTCCCACCAATCAACAACAGTCAAAGATCTCCGC 6 1220363 0.945988905 3 6 24 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 X:1220330-1220399 6 CG3638 FBtr0346960|FBtr0336978|FBtr0330207|FBtr0070249|FBtr0308707 1217081|1215287|1217081|1215712|1217947 1221459|1221459|1221459|1221459|1221459 CCCACC 6mer3-8 dme-miR-278-3p X - 1220345 1220378 3'utr CG3638 FlyBase G48215.1 AACCGTTGCCCGAGATTCCCACCAATCAACAACA 5 1220363 0.796871475 2 4 16 0.857142857 0.77815125 0 0.2 0.428571429 5 1 0 6 X:1220345-1220378 6 3.5 3797 FBgn0261444 352.62 5.606666667 8.55 0.009925699 0.624256837 0.409356725 2 2 2 0.15 dme-miR-14-3p 6mer2-7 AGACTG X 12331843 12331848 + X_12331843_12331848_+ 0.998567682 0.998610459 0.99858907 3.03E-05 Ten-a FBtr0300203|FBtr0299860|FBtr0300201|FBtr0346129|FBtr0308222|FBtr0299858|FBtr0308221|FBtr0346335|FBtr0308223|FBtr0299859|FBtr0310078 12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182 12332165|12332165|12332165|12335214|12332165|12332165|12332165|12332165|12332165|12332165|12335214 X + 12331825 12331869 3'utr Ten-a FlyBase G60869.1 TGGTACTCGAGCTTTTTGAGACTGGCATAGTTTTAAACAAAACCA 140 12331841 0.790078963 9 134 1296 0.941558442 1.860338007 0.012987013 0.078571429 0.162337662 140 8 1 145 X:12331825-12331869 6 Ten-a FBtr0310078|FBtr0308223|FBtr0299859|FBtr0346335|FBtr0308221|FBtr0299858|FBtr0308222|FBtr0346129|FBtr0300201|FBtr0299860|FBtr0300203 12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182 12335214|12332165|12332165|12332165|12332165|12332165|12332165|12335214|12332165|12332165|12332165 AGACTG 6mer2-7 dme-miR-14-3p X + 12331825 12331867 3'utr Ten-a FlyBase G45964.1 TGGTACTCGAGCTTTTTGAGACTGGCATAGTTTTAAACAAAAC 72 12331841 0.789914029 6 68 692 0.943396226 2 0.018867925 0.375 0.575471698 72 6 0 100 X:12331825-12331867 6 106 3798 FBgn0267001 445.45 3.99 6.113333333 0.237961612 26.56641604 17.3391494 2 2 2 0.15 dme-miR-1007-3p 6mer3-8 TGAGCT X 12460293 12460298 - X_12460293_12460298_- 0.532430506 0.991737344 0.762083925 0.324778953 Rab40 FBtr0073668|FBtr0339841|FBtr0073669 12459794|12459794|12459794 12460365|12460365|12460365 X - 12460267 12460313 3'utr Rab40 FlyBase G66931.1 GACATTAACTTTAATTGAGCTCTACTTATGTACTCTAGGCTATAACA 26 12460298 0.783987042 5 25 232 0.972972973 1.556302501 0.216216216 0.384615385 0.567567568 26 1 0 36 X:12460267-12460313 6 Rab40 FBtr0073669|FBtr0339841|FBtr0073668 12459794|12459794|12459794 12460365|12460365|12460365 TGAGCT 6mer3-8 dme-miR-1007-3p X - 12460273 12460309 3'utr Rab40 FlyBase G50395.1 TTAACTTTAATTGAGCTCTACTTATGTACTCTAGGCT 13 12460299 0.97318688 4 12 112 0.952380952 1.301029996 0 0.384615385 0.619047619 13 1 0 20 X:12460273-12460309 6 18.5 3799 FBgn0030391 73.34 5.683333333 8.663333333 0.252249795 3.255131965 2.135436706 0 1 0.5 0.15 dme-miR-283-5p 7mer-m1 GATATTT X 12584651 12584657 - X_12584651_12584657_- 0.405536291 0.567842371 0.486689331 0.114767744 LIMK1 FBtr0073660|FBtr0073661 12584383|12584383 12585938|12585938 X - 12584621 12584798 3'utr LIMK1 FlyBase G66954.1 ATATAGGATCGAAACGCTTGCAATTAACTGCTTACATAAGACATTTGAGTCGGGCCCTTGTTATACGGACGTATGCCAGTAGAACAGTGGCCGCGCCGAACCGATCTAGCATTTAACTATCTATATACAACAAATATGTGCGATATTTTTTATATGCAGCTAATTTAATGTGTTGTAT 69 12584662 0.986754341 15 68 584 0.987951807 1.913813852 0.036144578 0.173913043 0.313253012 69 1 0 82 X:12584621-12584798 7 LIMK1 FBtr0073661|FBtr0073660 12584383|12584383 12585938|12585938 GATATTT 7mer-m1 dme-miR-283-5p X - 12584633 12584676 3'utr LIMK1 FlyBase G50411.1 ATATACAACAAATATGTGCGATATTTTTTATATGCAGCTAATTT 27 12584662 0.974713499 4 26 219 0.972972973 1.556302501 0 0.333333333 0.513513514 27 1 0 36 X:12584633-12584676 7 39.5 3800 FBgn0041203 1320 31.21333333 47.99333333 0.029924242 1.265484836 0.823030977 5 5 5 0.15 dme-miR-184-3p 6mer2-7 CCGTCC X 12585050 12585055 - X_12585050_12585055_- 0.953478823 0.999999895 0.976739359 0.032895385 LIMK1 FBtr0073660|FBtr0073661|FBtr0301831|FBtr0073659 12584383|12584383|12584943|12584943 12585938|12585938|12585938|12585938 X - 12585025 12585155 3'utr LIMK1 FlyBase G66957.1 AAATGTATTTGTATATCTATTCCATAATTATATAGATAAACGTATTCCATGTTAGTGCTTAAATCTAATTTATTATTTATCGATTCTCGACCCATTCACCCCGTCCCCTCATTCCAAGAACAATAATTAAC 17 12585046 0.990507784 9 11 123 0.65 0.636822098 0.05 0.176470588 0.3 17 5 2 13 X:12585025-12585155 6 LIMK1 FBtr0073659|FBtr0301831|FBtr0073661|FBtr0073660 12584943|12584943|12584383|12584383 12585938|12585938|12585938|12585938 CCGTCC 6mer2-7 dme-miR-184-3p X - 12585034 12585080 3'utr LIMK1 FlyBase G50414.1 TTTATCGATTCTCGACCCATTCACCCCGTCCCCTCATTCCAAGAACA 8 12585061 0.678903619 5 8 40 1 1.079181246 0 0.375 0.583333333 8 0 0 12 X:12585034-12585080 6 8 3801 FBgn0041203 1320 31.21333333 47.99333333 0.006060606 0.256300726 0.166689818 -9 6 -1.5 0.15 dme-miR-263a-5p 7mer-m8 GTGCCAT X 12585296 12585302 - X_12585296_12585302_- 0.650571958 0.647692761 0.649132359 0.002035902 LIMK1 FBtr0073660|FBtr0073661|FBtr0301831|FBtr0073659 12584383|12584383|12584943|12584943 12585938|12585938|12585938|12585938 X - 12585283 12585328 3'utr LIMK1 FlyBase G66959.1 CGGATAAAGAGAGAAGGAAGAAACTTGTGCCATGATGTTGATGCGA 27 12585303 0.953136275 2 27 123 1 1.462397998 0.517241379 0.037037037 0.103448276 27 0 0 29 X:12585283-12585328 7 LIMK1 FBtr0073659|FBtr0301831|FBtr0073661|FBtr0073660 12584943|12584943|12584383|12584383 12585938|12585938|12585938|12585938 GTGCCAT 7mer-m8 dme-miR-263a-5p X - 12585280 12585321 3'utr LIMK1 FlyBase G50416.1 AGAGAGAAGGAAGAAACTTGTGCCATGATGTTGATGCGAAAA 13 12585303 0.946782185 2 13 57 1 1.278753601 0.210526316 0.307692308 0.526315789 13 0 0 19 X:12585280-12585321 7 20 3802 FBgn0041203 1320 31.21333333 47.99333333 0.015151515 0.640751815 0.416724545 1 1 1 0.15 dme-miR-7-5p 6mer2-7 TCTTCC X 12609435 12609440 + X_12609435_12609440_+ 0.70332075 0.732309501 0.717815126 0.020498177 Sec16 FBtr0340106|FBtr0310304|FBtr0113445|FBtr0340104 12608756|12608756|12608756|12608756 12609910|12609910|12609910|12609910 X + 12609419 12609452 3'utr Sec16 FlyBase G60906.1 ATATCCACACACGACCTCTTCCCCGATTTCTGTT 18 12609437 0.664848992 2 17 75 0.894736842 1.230448921 0.157894737 0.055555556 0.105263158 18 2 0 17 X:12609419-12609452 6 Sec16 FBtr0340104|FBtr0113445|FBtr0310304|FBtr0340106 12608756|12608756|12608756|12608756 12609910|12609910|12609910|12609910 TCTTCC 6mer2-7 dme-miR-7-5p X + 12609423 12609450 3'utr Sec16 FlyBase G45984.1 CCACACACGACCTCTTCCCCGATTTCTG 5 12609437 0.89906212 2 5 18 1 1 0.5 0.6 0.8 5 0 0 10 X:12609423-12609450 6 11.5 3803 FBgn0052654 1220.54 20.34 31.29 0.009422059 0.565388397 0.367529562 -2 -2 -2 0.15 dme-miR-317-3p 6mer3-8 TGTGTT X 12609712 12609717 + X_12609712_12609717_+ 0.986951273 0.815751709 0.901351491 0.121056398 Sec16 FBtr0340106|FBtr0310304|FBtr0113445|FBtr0340104 12608756|12608756|12608756|12608756 12609910|12609910|12609910|12609910 X + 12609661 12609767 3'utr Sec16 FlyBase G60909.1 AGAAGCAAATGAATTGTTCTCCCTGGTTTCTCTTATCAATGTATTCTCCTCTGTGTTTCTTTTTTACAATTGGTGTGAAATATGCAAATGATTCCAATTATATATAT 21 12609687 0.901102045 13 21 204 1 1.380211242 0.041666667 0.095238095 0.208333333 21 0 0 24 X:12609661-12609767 6 Sec16 FBtr0340104|FBtr0113445|FBtr0310304|FBtr0340106 12608756|12608756|12608756|12608756 12609910|12609910|12609910|12609910 TGTGTT 6mer3-8 dme-miR-317-3p X + 12609660 12609721 3'utr Sec16 FlyBase G45985.1 AAGAAGCAAATGAATTGTTCTCCCTGGTTTCTCTTATCAATGTATTCTCCTCTGTGTTTCTT 9 12609704 0.964568856 6 6 99 0.769230769 0.698970004 0.153846154 0.444444444 0.615384615 9 2 1 10 X:12609660-12609721 6 5.5 3804 FBgn0052654 1220.54 20.34 31.29 0.004506202 0.270403147 0.175775008 25 8 16.5 0.15 dme-miR-1008-3p 7mer-A1 GCTGTGA X 12679536 12679542 + X_12679536_12679542_+ 0.490503155 0.474851375 0.482677265 0.011067494 Tis11 FBtr0073683|FBtr0345165|FBtr0333756 12679239|12679239|12679239 12679702|12679702|12682554 X + 12679484 12679593 5'utr Tis11 FlyBase G60958.1 AACACAGACACCCCTTAATTATGAACCGATCCTTGATATCAATTCTCTCATTGCTGTGACAGTCAAACGTAATCGTTATACAATAATCGTTATATGAGAAGGACCGAATT 389 12679534 0.918152102 20 381 3064 0.979638009 2.335457901 0.088235294 0.12596401 0.230769231 389 8 1 433 X:12679484-12679593 7 Tis11 FBtr0333756|FBtr0345165|FBtr0073683 12679239|12679239|12679239 12682554|12679702|12679702 GCTGTGA 7mer-A1 dme-miR-1008-3p X + 12679489 12679561 5'utr Tis11 FlyBase G46019.1 AGACACCCCTTAATTATGAACCGATCCTTGATATCAATTCTCTCATTGCTGTGACAGTCAAACGTAATCGTTA 239 12679534 0.755531465 11 224 1903 0.942558747 1.955447211 0.093994778 0.426778243 0.64229765 239 19 3 361 X:12679489-12679561 7 275.5 3805 FBgn0011837 4912.7 119.65 184.0333333 0.056079142 2.302549102 1.497011411 2 2 2 0.15 dme-miR-970-3p 8mer-A1 TCTTATGA X 12679763 12679770 + X_12679763_12679770_+ 0.629544828 0.62956763 0.629556229 1.61E-05 Tis11 FBtr0333756 12679239 12682554 X + 12679737 12679822 3'utr Tis11 FlyBase G60960.1 ATGAATGCTATAGCTAAACAAAACATTCTTATGAACTGGACAAGATACAAAGACGGAGATAACGAAAAGGACTATTTGGGAATCTT 927 12679762 0.862003026 11 920 5440 0.991493384 2.543654233 0.396975425 0.116504854 0.225897921 927 7 2 1049 X:12679737-12679822 8 Tis11 FBtr0333756 12679239 12682554 TCTTATGA 8mer-A1 dme-miR-970-3p X + 12679723 12679841 3'utr Tis11 FlyBase G46021.1 AAAACATAGCTAGCATGAATGCTATAGCTAAACAAAACATTCTTATGAACTGGACAAGATACAAAGACGGAGATAACGAAAAGGACTATTTGGGAATCTTCAGCGAATGTTGCTCAAAT 594 12679762 0.972471895 9 590 3508 0.995348837 2.330413773 0.404651163 0.326599327 0.534883721 594 1 3 856 X:12679723-12679841 8 751 3806 FBgn0011837 4912.7 119.65 184.0333333 0.152869094 6.276640201 4.080782467 1 1 1 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA X 12679888 12679895 + X_12679888_12679895_+ 0.60467247 0.623761464 0.614216967 0.013497961 Tis11 FBtr0333756 12679239 12682554 X + 12679836 12679962 3'utr Tis11 FlyBase G60961.1 TCAAATCAAATCAACAAACCCCACGGCCAACGACGAATGTGAAAATCGTTCCTGCATTTATAGAAACTACTGCAGTGCATCCATTAGTAAAACCCATGCACACGCACACCTGTCGCTTTTGTTCAAT 32 12679896 0.978553899 11 30 194 0.944444444 1.531478917 0.138888889 0.125 0.222222222 32 2 0 34 X:12679836-12679962 8 Tis11 FBtr0333756 12679239 12682554 TGCATTTA 8mer-A1 dme-miR-277-3p X + 12679865 12679917 3'utr Tis11 FlyBase G46022.1 ACGACGAATGTGAAAATCGTTCCTGCATTTATAGAAACTACTGCAGTGCATCC 14 12679888 0.837078106 7 12 98 0.857142857 1.255272505 0.238095238 0.357142857 0.571428571 14 3 0 18 X:12679865-12679917 8 16.5 3807 FBgn0011837 4912.7 119.65 184.0333333 0.003358642 0.137902215 0.089657671 -8 0 -4 0.15 dme-miR-7-5p 8mer-A1 GTCTTCCA X 12680143 12680150 + X_12680143_12680150_+ 0.674631471 0.674400982 0.674516227 0.000162988 Tis11 FBtr0333756 12679239 12682554 X + 12680054 12680168 3'utr Tis11 FlyBase G60963.1 ATATATATATATGCATATTTGGCCACCACCTGTGTATATATAACTTTTGATGTGGATAAATAGAGAGCGAGATAGAGAGTTGGTCCGATGTCTTCCAATCCAAGCCAAGCCAAGC 83 12680142 0.982557211 11 81 606 0.980392157 2 0.029411765 0.180722892 0.333333333 83 2 0 100 X:12680054-12680168 8 Tis11 FBtr0333756 12679239 12682554 GTCTTCCA 8mer-A1 dme-miR-7-5p X + 12680118 12680169 3'utr Tis11 FlyBase G46024.1 GAGCGAGATAGAGAGTTGGTCCGATGTCTTCCAATCCAAGCCAAGCCAAGCC 46 12680142 0.980509136 4 45 321 0.985507246 1.832508913 0.15942029 0.326086957 0.550724638 46 1 0 68 X:12680118-12680169 8 57.5 3808 FBgn0011837 4912.7 119.65 184.0333333 0.011704358 0.480568324 0.312443398 1 1 1 0.15 dme-bantam-3p 6mer3-8 TGATCT X 12680370 12680375 + X_12680370_12680375_+ 0.576975768 0.555679336 0.566327552 0.0150589 Tis11 FBtr0333756 12679239 12682554 X + 12680272 12680398 3'utr Tis11 FlyBase G60965.1 ATTATGTAATAGAAAACGTTATGTACATACGAGAGTTAATATTTTGATAAAGATAATAAATTATAATTACCAATTACTCTATGATTACGTTTAAATGATGATCTTGAATGATATGAATATTATTGAT 176 12680370 0.986549479 16 173 1474 0.986784141 2.350248018 0.427312775 0.210227273 0.387665198 176 3 0 224 X:12680272-12680398 6 Tis11 FBtr0333756 12679239 12682554 TGATCT 6mer3-8 dme-bantam-3p X + 12680339 12680419 3'utr Tis11 FlyBase G46027.1 TACCAATTACTCTATGATTACGTTTAAATGATGATCTTGAATGATATGAATATTATTGATGATATACCTCTGCAAATCGTG 112 12680370 0.80003014 14 108 930 0.967532468 2.173186268 0.519480519 0.276785714 0.474025974 112 5 0 149 X:12680339-12680419 6 120 3809 FBgn0011837 4912.7 119.65 184.0333333 0.024426486 1.002925198 0.652055787 0 0 0 0.15 dme-miR-92b-3p 7mer-m1 TGCAATT X 12680654 12680660 + X_12680654_12680660_+ 0.765586443 0.759864761 0.762725602 0.004045782 Tis11 FBtr0333756 12679239 12682554 X + 12680625 12680694 3'utr Tis11 FlyBase G60967.1 TACATAAAACATACCAGATATATTTTATATGCAATTAATGTTAATAATTTATGAAAACAACACATGCGAC 10 12680636 0.987055853 7 9 76 0.933333333 1.146128036 0 0.5 0.666666667 10 1 0 14 X:12680625-12680694 7 Tis11 FBtr0333756 12679239 12682554 TGCAATT 7mer-m1 dme-miR-92b-3p X + 12680616 12680661 3'utr Tis11 FlyBase G46029.1 ACATCTATTTACATAAAACATACCAGATATATTTTATATGCAATTA 6 12680648 0.987143297 5 5 48 0.833333333 0.698970004 0 0 0 6 1 0 5 X:12680616-12680661 7 4 3810 FBgn0011837 4912.7 119.65 184.0333333 0.000814216 0.03343084 0.021735193 18 6 12 0.15 dme-miR-980-3p 6mer3-8 GGCAGC X 12681817 12681822 + X_12681817_12681822_+ 0.998126484 0.997186441 0.997656462 0.000664751 Tis11 FBtr0333756 12679239 12682554 X + 12681726 12681857 3'utr Tis11 FlyBase G60974.2 ACTTTGATTTTTACTTCCCATCGCAAAAAAACCCATTGTTTTCGTACTCCAATACGTATTGCAATCGAAATTGAACCGATTGGAATGTTATGGCAGCGTGCAAAAGTTTACTGTAATACCTATATTTAACAT 146 12681816 0.964546533 21 143 911 0.982142857 1.916453949 0.119047619 0.136986301 0.25 146 2 1 165 X:12681726-12681857 6 Tis11 FBtr0333756 12679239 12682554 GGCAGC 6mer3-8 dme-miR-980-3p X + 12681780 12681871 3'utr Tis11 FlyBase G46036.1 CGTATTGCAATCGAAATTGAACCGATTGGAATGTTATGGCAGCGTGCAAAAGTTTACTGTAATACCTATATTTAACATACTTATATATAATA 85 12681816 0.980100671 11 79 549 0.940397351 1.851258349 0.17218543 0.529411765 0.735099338 85 8 1 142 X:12681780-12681871 6 96 3811 FBgn0011837 4912.7 119.65 184.0333333 0.019541189 0.802340159 0.52164463 1 1 1 0.15 dme-miR-1007-3p 7mer-m8 TGAGCTT X 12681920 12681926 + X_12681920_12681926_+ 0.51576579 0.575319189 0.54554249 0.042110613 Tis11 FBtr0333756 12679239 12682554 X + 12681898 12681958 3'utr Tis11 FlyBase G60975.1 TTTAAAAAGCCTAACTTAGACCTGAGCTTTGGTTATCATCATGATGATTATTCTTATATTT 29 12681914 0.948881574 8 25 238 0.888888889 1.204119983 0.055555556 0.206896552 0.361111111 29 3 1 32 X:12681898-12681958 7 Tis11 FBtr0333756 12679239 12682554 TGAGCTT 7mer-m8 dme-miR-1007-3p X + 12681897 12681939 3'utr Tis11 FlyBase G46037.1 TTTTAAAAAGCCTAACTTAGACCTGAGCTTTGGTTATCATCAT 15 12681914 0.914918541 5 14 93 1 1.361727836 0.086956522 0.5 0.695652174 14 0 0 23 X:12681897-12681939 7 20.5 3812 FBgn0011837 4912.7 119.65 184.0333333 0.004172858 0.171333055 0.111392864 6 6 6 0.15 dme-miR-283-5p 6mer3-8 TGATAT X 12682267 12682272 + X_12682267_12682272_+ 0.992039584 0.978755221 0.985397402 0.009393489 Tis11 FBtr0333756 12679239 12682554 X + 12682255 12682290 3'utr Tis11 FlyBase G60977.1 AATATTTTTCATTGATATCCGCCTTGGCAACAACAA 33 12682267 0.719034318 5 32 269 1 1.568201724 0.054054054 0.090909091 0.189189189 33 0 0 37 X:12682255-12682290 6 Tis11 FBtr0333756 12679239 12682554 TGATAT 6mer3-8 dme-miR-283-5p X + 12682246 12682291 3'utr Tis11 FlyBase G46041.1 ATATACCATAATATTTTTCATTGATATCCGCCTTGGCAACAACAAA 24 12682267 0.886689218 4 22 204 0.941176471 1.505149978 0.029411765 0.333333333 0.529411765 24 2 0 32 X:12682246-12682291 6 28 3813 FBgn0011837 4912.7 119.65 184.0333333 0.005699514 0.23401588 0.15214635 0 0 0 0.15 dme-miR-14-3p 6mer3-8 AAGACT X 12685370 12685375 - X_12685370_12685375_- 0.999998522 0.999774483 0.999886503 0.000158392 Smr FBtr0333768|FBtr0333767 12684201|12684201 12687299|12687299 X - 12685328 12685399 3'utr Smr FlyBase G66986.1 TATATGAAGTAAACAACAAACGCTAAGACTTATTCAACAAAACAAAAATTGTAAAATATTAAAAGATAAACG 45 12685367 0.950580424 4 43 191 0.947368421 1.73239376 0.052631579 0.266666667 0.421052632 45 3 0 54 X:12685328-12685399 6 Smr FBtr0333767|FBtr0333768 12684201|12684201 12687299|12687299 AAGACT 6mer3-8 dme-miR-14-3p X - 12685353 12685397 3'utr Smr FlyBase G50432.1 TATGAAGTAAACAACAAACGCTAAGACTTATTCAACAAAACAAAA 35 12685367 0.945735132 3 34 144 0.966666667 1.763427994 0 0.571428571 0.75 35 2 0 58 X:12685353-12685397 6 39.5 3814 FBgn0265523 12357.95 106.01 163.76 0.003196323 0.372606358 0.241206644 -8 -8 -8 0.15 dme-miR-317-3p 6mer3-8 TGTGTT X 12685739 12685744 - X_12685739_12685744_- 0.993640734 0.997357381 0.995499058 0.002628104 Smr FBtr0333768|FBtr0333767 12684201|12684201 12687299|12687299 X - 12685708 12685756 3'utr Smr FlyBase G66987.1 ATGGAGCAAGATTGTGTTTTATTCCCTTCTTAGGCAAGCGCTATTGAAT 18 12685745 0.843340023 5 18 161 1 1.278753601 0.105263158 0.055555556 0.105263158 18 0 0 19 X:12685708-12685756 6 Smr FBtr0333767|FBtr0333768 12684201|12684201 12687299|12687299 TGTGTT 6mer3-8 dme-miR-317-3p X - 12685681 12685771 3'utr Smr FlyBase G50433.1 TGCAAGGCCTAATTTATGGAGCAAGATTGTGTTTTATTCCCTTCTTAGGCAAGCGCTATTGAATTATGTACGTTTAATTGCTAAGCTAATG 12 12685745 0.987012027 7 12 110 1 1.361727836 0.304347826 0.5 0.739130435 12 0 0 23 X:12685681-12685771 6 12.5 3815 FBgn0265523 12357.95 106.01 163.76 0.001011495 0.117913404 0.076331216 1 1 1 0.15 dme-miR-33-5p 6mer2-7 AATGCA X 12686503 12686508 - X_12686503_12686508_- 0.863942497 0.611700585 0.737821541 0.178361958 Smr FBtr0333765|FBtr0333768|FBtr0333766|FBtr0333767 12685999|12684201|12685999|12684201 12687299|12687299|12687299|12687299 X - 12686489 12686532 3'utr Smr FlyBase G66991.1 ATAAACAAATTGTGGATGCAGGAGAATGCAGACTAGCATAAAAC 5 12686522 0.921071968 4 5 20 1 0.77815125 0 0.2 0.333333333 5 0 0 6 X:12686489-12686532 6 Smr FBtr0333766|FBtr0333767|FBtr0333765|FBtr0333768 12685999|12684201|12685999|12684201 12687299|12687299|12687299|12687299 AATGCA 6mer2-7 dme-miR-33-5p X - 12686494 12686530 3'utr Smr FlyBase G50436.1 AAACAAATTGTGGATGCAGGAGAATGCAGACTAGCAT 5 12686506 0.984734109 2 4 13 1 0.84509804 0.571428571 0.5 0.714285714 4 0 0 7 X:12686494-12686530 6 3 3816 FBgn0265523 12357.95 106.01 163.76 0.000242759 0.028299217 0.018319492 14 -2 6 0.15 dme-miR-33-5p 6mer3-8 CAATGC X 12761223 12761228 - X_12761223_12761228_- 0.963450544 0.9310388 0.947244672 0.022918533 CG12717 FBtr0073704|FBtr0346120 12760876|12760640 12761297|12761297 X - 12761167 12761258 3'utr CG12717 FlyBase G67049.1 AAAACAACTGAACTGAAGACGATCGCAACGCAATGCTTTGGAACACTAGGAGGAGCAAATTGACACGGCGGAGATGGGTTCACCAGAAATAT 10 12761224 0.933125422 7 9 31 0.928571429 1.113943352 0.214285714 0.4 0.571428571 10 1 0 13 X:12761167-12761258 6 CG12717 FBtr0346120|FBtr0073704 12760640|12760876 12761297|12761297 CAATGC 6mer3-8 dme-miR-33-5p X - 12761215 12761243 3'utr CG12717 FlyBase G50479.1 AAGACGATCGCAACGCAATGCTTTGGAAC 6 12761223 0.644332462 3 5 16 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 X:12761215-12761243 6 4.5 3817 FBgn0030420 2125.08 87.28333333 134.6233333 0.002117567 0.051556234 0.033426598 -4 -5 -4.5 0.15 dme-miR-304-5p 7mer-m8 TGAGATT X 12774415 12774421 - X_12774415_12774421_- 0.596125149 0.620202943 0.608164046 0.017025576 CG32647 FBtr0346126|FBtr0340412 12771842|12773579 12776672|12776672 X - 12774401 12774448 3'utr CG32647 FlyBase G67062.1 CAATGAAAATGAGAATGAGAATGAGAATGAGATTGAGAATGGCAGATT 21 12774421 0.834650828 3 20 91 1 1.361727836 0.652173913 0.095238095 0.173913043 21 0 0 23 X:12774401-12774448 7 CG32647 FBtr0340412|FBtr0346126 12773579|12771842 12776672|12776672 TGAGATT 7mer-m8 dme-miR-304-5p X - 12774386 12774439 3'utr CG32647 FlyBase G50490.1 TGAGAATGAGAATGAGAATGAGATTGAGAATGGCAGATTCGAAGCGCGCTTAAC 7 12774422 0.95822981 4 7 34 1 1.041392685 0.272727273 0.571428571 0.727272727 7 0 0 11 X:12774386-12774439 7 13 3818 FBgn0052647 26.80666667 0.936666667 1.47 0.484953992 13.87900356 8.843537415 0 1 0.5 0.15 dme-miR-1008-3p 7mer-A1 GCTGTGA X 12774791 12774797 - X_12774791_12774797_- 0.809232222 0.801931851 0.805582037 0.005162092 CG32647 FBtr0346126|FBtr0340412 12771842|12773579 12776672|12776672 X - 12774770 12774891 3'utr CG32647 FlyBase G67064.1 ATTTTTTTCCACTTGACAGCACATCAAAGCAAATTAAATTTAACAATAAATACATATATAAAATGCGGGATATCCGAGAAAAACGTGGAGTACGGCTGTGAAATTATGTTTGCTTTAAAATA 43 12774801 0.980161692 13 36 262 0.826086957 1.102662342 0.347826087 0.069767442 0.130434783 43 6 2 38 X:12774770-12774891 7 CG32647 FBtr0340412|FBtr0346126 12773579|12771842 12776672|12776672 GCTGTGA 7mer-A1 dme-miR-1008-3p X - 12774762 12774816 3'utr CG32647 FlyBase G50491.1 GAGAAAAACGTGGAGTACGGCTGTGAAATTATGTTTGCTTTAAAATACATAAACG 22 12774803 0.983087058 5 15 117 0.636363636 1.021189299 0.363636364 0.272727273 0.515151515 22 11 1 21 X:12774762-12774816 7 25.5 3819 FBgn0052647 26.80666667 0.936666667 1.47 0.951255906 27.22419929 17.34693878 4 6 5 0.15 dme-bantam-3p 6mer2-7 GATCTC X 12775110 12775115 - X_12775110_12775115_- 0.934333273 0.95358153 0.943957402 0.013610533 CG32647 FBtr0346126|FBtr0340412 12771842|12773579 12776672|12776672 X - 12775063 12775131 3'utr CG32647 FlyBase G67065.1 CCCTTCAAGAAGAATAGATCTCGTTTCAACTTTAGGCTAATGACTCTGAAGCCATCTCCGTCTCTTTCT 54 12775108 0.975407675 7 52 329 0.970588235 1.819543936 0.058823529 0.222222222 0.382352941 54 2 0 66 X:12775063-12775131 6 CG32647 FBtr0340412|FBtr0346126 12773579|12771842 12776672|12776672 GATCTC 6mer2-7 dme-bantam-3p X - 12775058 12775128 3'utr CG32647 FlyBase G50492.1 TTCAAGAAGAATAGATCTCGTTTCAACTTTAGGCTAATGACTCTGAAGCCATCTCCGTCTCTTTCTATATA 31 12775108 0.975685273 5 30 194 0.975 1.591064607 0.025 0.258064516 0.425 31 1 0 39 X:12775058-12775128 6 39.5 3820 FBgn0052647 26.80666667 0.936666667 1.47 1.473514051 42.17081851 26.8707483 -7 -7 -7 0.15 dme-miR-1008-3p 6mer3-8 AGCTGT X 12911753 12911758 + X_12911753_12911758_+ 0.999319203 1 0.999659601 0.000481398 CG4645 FBtr0343649|FBtr0346316|FBtr0073692 12911708|12911708|12911708 12911897|12912070|12911897 X + 12911722 12911763 3'utr CG4645 FlyBase G60994.1 GAGAAACCAGTTCGTCAACGTCGCTGAACTAAGCTGTAAATT 5 12911733 0.91649001 5 5 29 1 0.698970004 0 0 0 5 0 0 5 X:12911722-12911763 6 CG4645 FBtr0346316 12911708 12912070 AGCTGT 6mer3-8 dme-miR-1008-3p X + 12911708 12911758 stop_codon CG4645 FlyBase G46056.1 AGGATGCATTCCGCGAGAAACCAGTTCGTCAACGTCGCTGAACTAAGCTGT 8 12911745 0.975208718 6 6 38 0.833333333 1 0.083333333 0.25 0.5 8 2 0 10 X:12911708-12911758 6 3 3821 FBgn0030435 142.39 10.84666667 16.51 0.021068895 0.276582667 0.181708056 20 8 14 0.15 dme-miR-932-5p 6mer3-8 GGAATT X 13079531 13079536 - X_13079531_13079536_- 0.896314888 0.942188523 0.919251705 0.032437534 hep FBtr0340303|FBtr0330396 13079203|13079203 13080428|13080401 X - 13079506 13079597 3'utr hep FlyBase G67100.1 TAAACATCAACTTGTATGCTGAGTGGAAGGGAAACCGACAAGAAACAACCACATTAACAATGGAATTATTGTACTGATTATTATAATTGTTT 91 13079529 0.991347451 14 84 949 0.916666667 1.694605199 0.148148148 0.142857143 0.277777778 91 8 1 99 X:13079506-13079597 6 hep FBtr0340303|FBtr0330396 13079203|13079203 13080428|13080401 GGAATT 6mer3-8 dme-miR-932-5p X - 13079506 13079539 3'utr hep FlyBase G50511.1 AATGGAATTATTGTACTGATTATTATAATTGTTT 63 13079530 0.719817724 8 59 707 0.964705882 1.612783857 0.105882353 0.26984127 0.458823529 63 2 1 82 X:13079506-13079539 6 71.5 3822 FBgn0010303 1946.036667 56.33 86.79333333 0.036741343 1.269305876 0.82379599 -7 -6 -6.5 0.15 dme-miR-2a-2-5p 6mer3-8 TGATGA X 13080078 13080083 - X_13080078_13080083_- 0.937454181 0.888900031 0.913177106 0.034333004 hep FBtr0340303|FBtr0330396|FBtr0330397|FBtr0073747 13079203|13079203|13079729|13079729 13080428|13080401|13084554|13080428 X - 13080041 13080109 3'utr hep FlyBase G67103.1 GAGCTGGATATCCGTGGACATGTGATTGATGACAAACGAAAGTGTTCAAAAGTCTTATACGTTTAAGTG 20 13080083 0.974423176 4 19 120 0.96 1.079181246 0.32 0.25 0.4 20 0 1 24 X:13080041-13080109 6 hep FBtr0330397|FBtr0073747|FBtr0340303|FBtr0330396 13079729|13079729|13079203|13079203 13084554|13080428|13080428|13080401 TGATGA 6mer3-8 dme-miR-2a-2-5p X - 13080066 13080120 3'utr hep FlyBase G50514.1 ATCGACGACCAGAGCTGGATATCCGTGGACATGTGATTGATGACAAACGAAAGTG 15 13080083 0.976702792 6 14 96 1 1.414973348 0.307692308 0.533333333 0.730769231 15 0 0 26 X:13080066-13080120 6 16 3823 FBgn0010303 1946.036667 56.33 86.79333333 0.008221839 0.284040476 0.184345956 0 0 0 0.15 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 13081902 13081909 - X_13081902_13081909_- 0.631130918 0.629383767 0.630257343 0.001235386 hep FBtr0330397 13079729 13084554 X - 13081888 13081925 5'utr hep FlyBase G67104.1 ATCAACGCACTCCACCTCTAGTCAGTCCTCCACGCAGT 42 13081900 0.696249877 3 40 212 0.957446809 1.653212514 0.106382979 0.095238095 0.191489362 42 2 0 45 X:13081888-13081925 8 hep FBtr0330397 13079729 13084554 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X - 13081891 13081923 5'utr hep FlyBase G50515.1 CAACGCACTCCACCTCTAGTCAGTCCTCCACGC 19 13081900 0.734519201 4 19 94 1 1.51851394 0.121212121 0.421052632 0.666666667 19 0 0 33 X:13081891-13081923 8 30.5 3824 FBgn0010303 1946.036667 56.33 86.79333333 0.01567288 0.541452157 0.351409478 -9 -9 -9 0.15 dme-miR-1003-3p 7mer-A1 TGTGAGA X 13123232 13123238 - X_13123232_13123238_- 0.821515956 0.818925272 0.820220614 0.001831902 CG32638 FBtr0300453 13122874 13123472 X - 13123132 13123255 3'utr CG32638 FlyBase G67119.1 TTTTGTTAGTGCAATATTGTGAGAGAGACAACGATTAAGGTTAAGCATTGTAGTTAAATACGGCATCGGAATTTCATAAAGAAACGTGTAGGTGCGTGTTTTCCTTGTCCCATATACACAAACC 23 13123239 0.981113858 9 19 142 0.875 1.322219295 0.25 0.043478261 0.083333333 23 3 0 21 X:13123132-13123255 7 CG32638 FBtr0300453 13122874 13123472 TGTGAGA 7mer-A1 dme-miR-1003-3p X - 13123186 13123248 3'utr CG32638 FlyBase G50525.1 AGTGCAATATTGTGAGAGAGACAACGATTAAGGTTAAGCATTGTAGTTAAATACGGCATCGGA 14 13123239 0.891319201 6 13 73 0.95 0.977723605 0.35 0.357142857 0.55 14 0 1 19 X:13123186-13123248 7 11.5 3825 FBgn0052638 822.99 64.44 99.11666667 0.013973438 0.178460583 0.116024886 1 1 1 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA X 13123358 13123364 - X_13123358_13123364_- 0.810785293 0.810997721 0.810891507 0.000150189 CG32638 FBtr0300453 13122874 13123472 X - 13123321 13123436 3'utr CG32638 FlyBase G67120.1 ACACCACTACGATAATAGACAGCGGATTCCGCAATGGAACAGCAAAGACAACCCATGTGTAGAAAGACTTGACTAGTCAGTGTCGCTGCCGAAAGTAATCAGAATATTTGAATGCG 68 13123368 0.970191694 12 66 376 0.976190476 1.612783857 0.19047619 0.147058824 0.30952381 68 1 1 82 X:13123321-13123436 7 CG32638 FBtr0300453 13122874 13123472 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X - 13123331 13123391 3'utr CG32638 FlyBase G50526.1 AGACAACCCATGTGTAGAAAGACTTGACTAGTCAGTGTCGCTGCCGAAAGTAATCAGAATA 49 13123368 0.783315048 6 48 282 0.963855422 1.903089987 0.228915663 0.367346939 0.626506024 49 3 0 80 X:13123331-13123391 7 51 3826 FBgn0052638 822.99 64.44 99.11666667 0.061969161 0.791433892 0.514545149 4 4 4 0.15 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA X 13134356 13134362 + X_13134356_13134362_+ 0.822565179 0.798707239 0.810636209 0.016870154 CG15717 FBtr0339676 13129976 13134565 X + 13134274 13134385 3'utr CG15717 FlyBase G61016.1 CATCAATCATCGCGAGACTCTGACACAGTGGCATCTGGTCTTCTGGCTGGCGGCGGGCTTGAATATAGCCGGTAACTTCATCTACCTGATCTTCGCCAGCGCCGAGGAGCAA 39 13134354 0.983614642 12 37 285 0.953488372 1.311753861 0.302325581 0.102564103 0.186046512 39 1 1 41 X:13134274-13134385 7 CG15717 FBtr0339676 13129976 13134565 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" X + 13134300 13134382 3'utr CG15717 FlyBase G46077.1 AGTGGCATCTGGTCTTCTGGCTGGCGGCGGGCTTGAATATAGCCGGTAACTTCATCTACCTGATCTTCGCCAGCGCCGAGGAG 19 13134354 0.98484249 9 17 136 0.892857143 1.397940009 0.535714286 0.368421053 0.571428571 19 3 0 25 X:13134300-13134382 7 22.5 3827 FBgn0030451 195.7633333 20.76333333 31.87333333 0.1149347 1.083641034 0.705919264 2 2 2 0.15 dme-miR-999-3p 6mer2-7 GTTAAC X 13134635 13134640 + X_13134635_13134640_+ 0.581942486 0.99999112 0.790966803 0.295605 MFS10 FBtr0339677 13134435 13134839 X + 13134594 13134656 3'utr MFS10 FlyBase G61019.1 GAAACTAGTGCTACCAAATCGGAATGGAAAATCGAAAGGATGTTAACTGTTTTAGTGTATTAT 12 13134618 0.900689136 7 12 69 1 1.146128036 0.428571429 0.166666667 0.285714286 12 0 0 14 X:13134594-13134656 6 MFS10 FBtr0339677 13134435 13134839 GTTAAC 6mer2-7 dme-miR-999-3p X + 13134590 13134690 3'utr MFS10 FlyBase G46079.1 GAACGAAACTAGTGCTACCAAATCGGAATGGAAAATCGAAAGGATGTTAACTGTTTTAGTGTATTATATACGTGTATCGTCCTTTTATATGGACTTTTGTT 15 13134635 0.989506652 10 14 126 0.954545455 1.322219295 0 0.333333333 0.545454545 15 1 0 21 X:13134590-13134690 6 6 3828 FBgn0030452 712.7033333 29.94 45.85666667 0.00841865 0.200400802 0.13084248 17 0 8.5 0.15 dme-miR-282-5p 6mer3-8 AGAGGC X 13195603 13195608 - X_13195603_13195608_- 0.999999759 0.999956453 0.999978106 3.06E-05 sno FBtr0340488|FBtr0340489 13195497|13195497 13196279|13196279 X - 13195588 13195632 3'utr sno FlyBase G67136.1 TGTAAGTTTAACCAACAGACATTGAGAGGCATCTGAATATAAGTT 14 13195610 0.624036428 4 13 66 1 1.255272505 0 0.214285714 0.388888889 14 0 0 18 X:13195588-13195632 6 sno FBtr0340488|FBtr0340489 13195497|13195497 13196279|13196279 AGAGGC 6mer3-8 dme-miR-282-5p X - 13195582 13195629 3'utr sno FlyBase G50540.1 AAGTTTAACCAACAGACATTGAGAGGCATCTGAATATAAGTTAAGAAA 10 13195610 0.954004645 3 10 51 1 1.176091259 0 0.4 0.6 10 0 0 15 X:13195582-13195629 6 11.5 3829 FBgn0265630 1551.576667 31.13333333 47.87666667 0.007411816 0.369379015 0.240200515 2 2 2 0.15 dme-miR-965-3p 7mer-A1 ACGCTTA X 13195853 13195859 - X_13195853_13195859_- 0.737381915 0.714396402 0.725889158 0.016253203 sno FBtr0340488|FBtr0340489 13195497|13195497 13196279|13196279 X - 13195822 13195879 3'utr sno FlyBase G67137.1 ATATAGAGAACGAAATGTAAACGCTTATAAATGGACTTTTCTCAATGATTTAATGATT 253 13195848 0.811824095 9 247 2016 0.97740113 2.238046103 0.774011299 0.320158103 0.514124294 253 7 1 346 X:13195822-13195879 7 sno FBtr0340488|FBtr0340489 13195497|13195497 13196279|13196279 ACGCTTA 7mer-A1 dme-miR-965-3p X - 13195819 13195982 3'utr sno FlyBase G50541.1 TGTACAACCATAAACCCATCCATCAGACTTTGGCTCGTTATAGTTCATAGAAACACCACACTCACATACTGACACACGCGCAACGTACAGATGATATGATGACATATAGAGAACGAAATGTAAACGCTTATAAATGGACTTTTCTCAATGATTTAATGATTAAT 240 13195848 0.985028554 24 235 1897 0.979289941 2.519827994 0.639053254 0.3 0.50295858 240 7 0 331 X:13195819-13195982 7 227 3830 FBgn0265630 1551.576667 31.13333333 47.87666667 0.146302793 7.291220557 4.7413493 -11 -11 -11 0.15 dme-miR-92b-3p 8mer-A1 GTGCAATA X 13263983 13263990 - X_13263983_13263990_- 0.628495977 0.62890767 0.628701823 0.000291116 HDAC4 FBtr0308576|FBtr0333331|FBtr0301299|FBtr0073798|FBtr0301298|FBtr0333333|FBtr0333332|FBtr0333334 13263753|13262685|13263753|13263753|13262887|13262887|13262887|13262887 13264981|13264981|13264981|13264981|13264981|13264981|13264981|13264981 X - 13263968 13264002 3'utr HDAC4 FlyBase G67160.1 AAAATATATATTGTGCAATAAATGTGAGAAAATGA 6 13263991 0.724042958 4 6 35 1 0.77815125 0.333333333 0 0 6 0 0 6 X:13263968-13264002 8 HDAC4 FBtr0333334|FBtr0333332|FBtr0333333|FBtr0301298|FBtr0073798|FBtr0301299|FBtr0333331|FBtr0308576 13262887|13262887|13262887|13262887|13263753|13263753|13262685|13263753 13264981|13264981|13264981|13264981|13264981|13264981|13264981|13264981 GTGCAATA 8mer-A1 dme-miR-92b-3p X - 13263970 13264004 3'utr HDAC4 FlyBase G50550.1 AAAAAATATATATTGTGCAATAAATGTGAGAAAAT 5 13263992 0.901998704 3 5 37 1 0.903089987 0 0.4 0.625 5 0 0 8 X:13263970-13264004 8 5.5 3831 FBgn0041210 5130.7 102.1166667 156.9133333 0.001071978 0.053859964 0.035051196 1 2 1.5 0.15 dme-miR-1008-3p 6mer2-7 GCTGTG X 13264626 13264631 - X_13264626_13264631_- 0.860767626 0.889486602 0.875127114 0.0203074 HDAC4 FBtr0308576|FBtr0333331|FBtr0301299|FBtr0073798|FBtr0301298|FBtr0333333|FBtr0333332|FBtr0333334 13263753|13262685|13263753|13263753|13262887|13262887|13262887|13262887 13264981|13264981|13264981|13264981|13264981|13264981|13264981|13264981 X - 13264591 13264685 3'utr HDAC4 FlyBase G67164.1 TATAGGGGAACATGTCTAAAAGAAGCAGAACAGGGCCTAAAGTTCAAAATGGTGGCTGTGCCTCCAAAAGAAGAAATAATTATAATAATTAGAAA 136 13264633 0.970814674 8 135 778 0.993506494 1.883661435 0.116883117 0.125 0.227272727 136 0 1 153 X:13264591-13264685 6 HDAC4 FBtr0333334|FBtr0333332|FBtr0333333|FBtr0301298|FBtr0073798|FBtr0301299|FBtr0333331|FBtr0308576 13262887|13262887|13262887|13262887|13263753|13263753|13262685|13263753 13264981|13264981|13264981|13264981|13264981|13264981|13264981|13264981 GCTGTG 6mer2-7 dme-miR-1008-3p X - 13264592 13264659 3'utr HDAC4 FlyBase G50556.1 AGAACAGGGCCTAAAGTTCAAAATGGTGGCTGTGCCTCCAAAAGAAGAAATAATTATAATAATTAGAA 71 13264633 0.972695453 6 66 394 0.942307692 1.514104821 0.067307692 0.338028169 0.548076923 71 4 2 98 X:13264592-13264659 6 97.5 3832 FBgn0041210 5130.7 102.1166667 156.9133333 0.019003255 0.954790273 0.621362111 2 2 2 0.15 dme-miR-980-3p 6mer3-8 GGCAGC X 13287558 13287563 + X_13287558_13287563_+ 0.999980038 0.999635878 0.999807958 0.000243315 CG15743 FBtr0346123|FBtr0333330|FBtr0073755 13287493|13287493|13287493 13287741|13287741|13287741 X + 13287535 13287584 3'utr CG15743 FlyBase G61049.1 AATCCCCTCGCCCACATCGTTTAGGCAGCATTCAAAAATAGCTTTAAGTT 41 13287556 0.770775241 6 40 263 0.97826087 1.653212514 0.043478261 0.097560976 0.195652174 41 1 0 45 X:13287535-13287584 6 CG15743 FBtr0073755|FBtr0333330|FBtr0346123 13287493|13287493|13287493 13287741|13287741|13287741 GGCAGC 6mer3-8 dme-miR-980-3p X + 13287516 13287577 3'utr CG15743 FlyBase G46096.1 TTCTAACCCTTCCCGAGGAAATCCCCTCGCCCACATCGTTTAGGCAGCATTCAAAAATAGCT 29 13287556 0.978587066 5 29 184 1 1.69019608 0 0.448275862 0.673469388 29 0 0 49 X:13287516-13287577 6 33 3833 FBgn0030465 244.6633333 20.01333333 30.50666667 0.134879222 1.648900733 1.081730769 2 2 2 0.15 dme-miR-307a-3p 7mer-m8 GGTTGTG X 13287661 13287667 + X_13287661_13287667_+ 0.70206594 0.702044263 0.702055101 1.53E-05 CG15743 FBtr0346123|FBtr0333330|FBtr0073755 13287493|13287493|13287493 13287741|13287741|13287741 X + 13287652 13287686 3'utr CG15743 FlyBase G61050.1 AATTACGTTGGTTGTGCGGCGGCGCGGCGGGGTCA 19 13287660 0.712804762 2 17 115 0.818181818 1.255272505 0.318181818 0.105263158 0.227272727 19 4 0 18 X:13287652-13287686 7 CG15743 FBtr0073755|FBtr0333330|FBtr0346123 13287493|13287493|13287493 13287741|13287741|13287741 GGTTGTG 7mer-m8 dme-miR-307a-3p X + 13287652 13287711 3'utr CG15743 FlyBase G46098.1 AATTACGTTGGTTGTGCGGCGGCGCGGCGGGGTCATGAACCCGGACCAAACCAAACCGCC 12 13287660 0.966796712 2 12 62 1 1.230448921 0.352941176 0.25 0.470588235 12 0 0 17 X:13287652-13287711 7 14.5 3834 FBgn0030465 244.6633333 20.01333333 30.50666667 0.059265113 0.724516989 0.475305944 1 1 1 0.15 dme-miR-1012-3p 6mer2-7 TGACTA X 13294202 13294207 + X_13294202_13294207_+ 0.987867976 0.998601813 0.993234894 0.007589943 CG15744 FBtr0073756 13293877 13294433 X + 13294088 13294221 3'utr CG15744 FlyBase G61056.1 ATATATATATATATGTATATATATGGGCAGTGGGCTTATATCTTAAGTTTCGCCCACTTAAAACCTAGCCAGCTAACTGAACTTGTAATTATAGTAAGGACTCCCTATTTATTATGACTAGTATTACTCCACAA 26 13294172 0.981870038 15 26 202 1 1.462397998 0.103448276 0.115384615 0.206896552 26 0 0 29 X:13294088-13294221 6 CG15744 FBtr0073756 13293877 13294433 TGACTA 6mer2-7 dme-miR-1012-3p X + 13294125 13294215 3'utr CG15744 FlyBase G46102.1 ATATCTTAAGTTTCGCCCACTTAAAACCTAGCCAGCTAACTGAACTTGTAATTATAGTAAGGACTCCCTATTTATTATGACTAGTATTACT 13 13294176 0.984352706 9 12 92 0.875 1.146128036 0.0625 0.230769231 0.375 13 2 0 14 X:13294125-13294215 6 5 3835 FBgn0030466 1200.416667 23.08666667 35.35 0.00416522 0.216575224 0.141442716 30 26 28 0.15 dme-miR-13b-2-5p 8mer-m1 TTTGACGC X 13294772 13294779 - X_13294772_13294779_- 0.618095128 0.618022236 0.618058682 5.15E-05 CG1764 FBtr0339946|FBtr0073796 13294471|13294485 13294970|13294970 X - 13294706 13294872 3'utr CG1764 FlyBase G67187.1 CCCTGCTCTGTCCAGGCATCAGCAAAATTGTATTATCTTATTATAGTTTATACACACCATCTCTTGTTATTGTTACACAATTAAGATTAAACCTTTGACGCTAATCAAACTGATTGTCGCTGAGGCGTCGCTGCTGTTACTTTCCAGCTCATTGTTATTTTATAGGT 41 13294808 0.987971222 19 39 358 0.94 1.672097858 0.06 0.170731707 0.32 41 3 0 47 X:13294706-13294872 8 CG1764 FBtr0339946|FBtr0073796 13294471|13294485 13294970|13294970 TTTGACGC 8mer-m1 dme-miR-13b-2-5p X - 13294679 13294854 3'utr CG1764 FlyBase G50579.1 TCAGCAAAATTGTATTATCTTATTATAGTTTATACACACCATCTCTTGTTATTGTTACACAATTAAGATTAAACCTTTGACGCTAATCAAACTGATTGTCGCTGAGGCGTCGCTGCTGTTACTTTCCAGCTCATTGTTATTTTATAGGTTGTGTAATTCAATCAGAGTTGGAAAGT 32 13294758 0.982148016 12 30 233 0.955555556 1.633468456 0.066666667 0.3125 0.511111111 32 2 0 43 X:13294679-13294854 8 9 3836 FBgn0030467 288.8666667 25.22333333 38.49333333 0.031156243 0.356812475 0.23380672 29 -21 4 0.15 dme-miR-263a-5p 6mer2-7 TGCCAT X 13294919 13294924 - X_13294919_13294924_- 0.937178101 0.862114234 0.899646167 0.053078193 CG1764 FBtr0339946|FBtr0073796 13294471|13294485 13294970|13294970 X - 13294886 13294945 3'utr CG1764 FlyBase G67188.1 ACCGACCGGAGTGAGAAGCATTGCCATGAGAAACATGCACAACAGGCCCAAGGAGCAGGA 26 13294925 0.91769887 4 25 73 0.964285714 1.431363764 0.357142857 0.076923077 0.142857143 26 1 0 27 X:13294886-13294945 6 CG1764 FBtr0339946|FBtr0073796 13294471|13294485 13294970|13294970 TGCCAT 6mer2-7 dme-miR-263a-5p X - 13294886 13294943 3'utr CG1764 FlyBase G50580.1 CGACCGGAGTGAGAAGCATTGCCATGAGAAACATGCACAACAGGCCCAAGGAGCAGGA 11 13294925 0.916015605 2 10 32 0.923076923 1.079181246 0.461538462 0.181818182 0.307692308 11 1 0 12 X:13294886-13294943 6 17.5 3837 FBgn0030467 288.8666667 25.22333333 38.49333333 0.060581583 0.693802035 0.454624177 1 1 1 0.15 dme-miR-965-3p 6mer3-8 TACGCT X 13299842 13299847 + X_13299842_13299847_+ 0.964958328 0.954225758 0.959592043 0.007589024 CG1622 FBtr0073757|FBtr0310465|FBtr0339945 13299572|13298901|13297895 13299910|13299910|13299910 X + 13299821 13299861 3'utr CG1622 FlyBase G61063.1 TTTGTAATTTGTGACTACACTTACGCTGATAAAATAGTTTT 8 13299841 0.924473657 4 8 63 1 0.954242509 0 0.125 0.222222222 8 0 0 9 X:13299821-13299861 6 CG1622 FBtr0310465|FBtr0339945|FBtr0073757 13298901|13297895|13299572 13299910|13299910|13299910 TACGCT 6mer3-8 dme-miR-965-3p X + 13299781 13299861 3'utr CG1622 FlyBase G46105.1 CTAGACACAATCACATGCGGACACAGCAGCAAGGCTATATTTTGTAATTTGTGACTACACTTACGCTGATAAAATAGTTTT 10 13299841 0.973629031 5 10 60 1 1.113943352 0 0.3 0.461538462 10 0 0 13 X:13299781-13299861 6 7 3838 FBgn0030468 1094.686667 76.97333333 117.3766667 0.006394524 0.090940585 0.059637066 1 1 1 0.15 dme-miR-14-3p 8mer-A1 AAGACTGA X 13328933 13328940 + X_13328933_13328940_+ 0.643564362 0.643553943 0.643559153 7.42E-06 IP3K2 FBtr0344168|FBtr0344171|FBtr0344170|FBtr0346133|FBtr0346134|FBtr0344169 13328764|13328764|13328764|13328764|13328764|13328764 13329069|13329303|13329303|13329303|13329303|13329303 X + 13328908 13328965 3'utr IP3K2 FlyBase G61091.1 ATTTAACCCCTTAAGTTTAAAATCAAAGACTGAAATCACAATATGCATACACATATTT 171 13328924 0.595304778 7 140 831 0.823232323 1.066059569 0.01010101 0.111111111 0.232323232 171 22 13 163 X:13328908-13328965 8 IP3K2 FBtr0344169|FBtr0346134|FBtr0346133|FBtr0344170|FBtr0344171|FBtr0344168 13328764|13328764|13328764|13328764|13328764|13328764 13329303|13329303|13329303|13329303|13329303|13329069 AAGACTGA 8mer-A1 dme-miR-14-3p X + 13328911 13328956 3'utr IP3K2 FlyBase G46128.1 TAACCCCTTAAGTTTAAAATCAAAGACTGAAATCACAATATGCATA 133 13328924 0.627803698 6 120 671 0.889473684 1.5289167 0 0.323308271 0.526315789 133 17 4 169 X:13328911-13328956 8 151.5 3839 FBgn0266375 946.9066667 46.57333333 71.42666667 0.159994649 3.25293444 2.121056562 9 9 9 0.15 dme-miR-184-3p 6mer2-7 CCGTCC X 13379599 13379604 + X_13379599_13379604_+ 0.99233206 0.861425631 0.926878845 0.092564874 CG1640 FBtr0073774|FBtr0073772|FBtr0073771|FBtr0073770|FBtr0073769|FBtr0339837|FBtr0073773 13379580|13379580|13379580|13379580|13379580|13379580|13379580 13380160|13380160|13380160|13380160|13380160|13380160|13380160 X + 13379576 13379650 stop_codon CG1640 FlyBase G61111.1 AAGTAGATCAGCTGCCAACTTCCCCGTCCTCGATCCCTGTGTTAAGTGTCAATCCTCCGGCTTAGGATTAAAAAT 45 13379608 0.759661754 15 40 308 0.907407407 1.389166084 0.12962963 0.2 0.333333333 45 4 1 49 X:13379576-13379650 6 CG1640 FBtr0339837|FBtr0073773|FBtr0073769|FBtr0073771|FBtr0073770|FBtr0073774|FBtr0073772 13379580|13379580|13379580|13379580|13379580|13379580|13379580 13380160|13380160|13380160|13380160|13380160|13380160|13380160 CCGTCC 6mer2-7 dme-miR-184-3p X + 13379569 13379653 stop_codon CG1640 FlyBase G46143.1 GAAGTACAAGTAGATCAGCTGCCAACTTCCCCGTCCTCGATCCCTGTGTTAAGTGTCAATCCTCCGGCTTAGGATTAAAAATTTA 30 13379609 0.765841305 11 27 225 0.904761905 1.579783597 0.261904762 0.366666667 0.547619048 30 4 0 38 X:13379569-13379653 6 26 3840 FBgn0030478 719.3333333 33.57333333 51.13 0.036144578 0.774424146 0.508507725 -9 -10 -9.5 0.15 dme-miR-14-3p 6mer3-8 AAGACT X 13380574 13380579 - X_13380574_13380579_- 0.928753439 0.994057617 0.961405528 0.046177043 Rbp1-like FBtr0339838 13380164 13380955 X - 13380555 13380596 3'utr Rbp1-like FlyBase G67198.1 ATTGGTTTTTAGGCCTTAAGACTTTGGTAGATTTTAATTCAG 23 13380572 0.768928257 6 23 241 1 1.431363764 0.074074074 0.130434783 0.259259259 23 0 0 27 X:13380555-13380596 6 Rbp1-like FBtr0339838 13380164 13380955 AAGACT 6mer3-8 dme-miR-14-3p X - 13380556 13380595 3'utr Rbp1-like FlyBase G50590.1 TTGGTTTTTAGGCCTTAAGACTTTGGTAGATTTTAATTCA 19 13380572 0.720135623 5 19 173 1 1.414973348 0.115384615 0.315789474 0.5 19 0 0 26 X:13380556-13380595 6 21 3841 FBgn0030479 464.9333333 40.22333333 61.53666667 0.045167766 0.522085025 0.341259953 -7 -7 -7 0.15 dme-miR-282-5p 6mer2-7 GAGGCT X 13386050 13386055 - X_13386050_13386055_- 0.960111088 0.96342041 0.961765749 0.002340028 Yippee FBtr0073789|FBtr0100168 13385912|13385912 13386343|13386533 X - 13385940 13386168 3'utr Yippee FlyBase G67203.1 CCGCCACGGAGCACATGCGACTACGGCCCTGTCTTAACGTGACTTAAACGTAATTGTAGGCACATCTAGCACGTAAGCAGCTGCGGCGCCCAATTCTACCATTTAAATGTCATGAGGCTGAAGTGCTAAAACGAAAAAGATGGGCTGCTACTCAGCTGGAACATATTCGAAACTGATGATCCACACTTGTCTTTTTCAAACAAGATCTCTAGGCCGTAATCAATCAGCA 537 13386056 0.998371706 28 524 2786 0.986686391 2.347004579 0.022189349 0.2141527 0.375739645 537 7 2 667 X:13385940-13386168 6 Yippee FBtr0073789|FBtr0100168 13385912|13385912 13386343|13386533 GAGGCT 6mer2-7 dme-miR-282-5p X - 13385990 13386086 3'utr Yippee FlyBase G50594.1 GCGGCGCCCAATTCTACCATTTAAATGTCATGAGGCTGAAGTGCTAAAACGAAAAAGATGGGCTGCTACTCAGCTGGAACATATTCGAAACTGATGA 328 13386056 0.956721014 11 323 1521 0.992110454 2.701567985 0.007889546 0.402439024 0.613412229 328 4 0 503 X:13385990-13386086 6 363.5 3842 FBgn0026749 336.1966667 36.58666667 56.19666667 1.081212386 9.935313411 6.468355181 1 1 1 0.15 dme-miR-184-3p 6mer3-8 TCCGTC X 13386369 13386374 - X_13386369_13386374_- 0.993881311 0.994119834 0.994000572 0.000168645 Yippee FBtr0100168 13385912 13386533 X - 13386332 13386390 stop_codon Yippee FlyBase G67205.1 CAGAGGCAGAGGGCTTTCCGTCGGAGGCCGCCACCACGAGTCATTGAGCCGATTGAATA 9 13386375 0.907862781 3 9 30 1 1 0.3 0.111111111 0.2 9 0 0 10 X:13386332-13386390 6 Yippee FBtr0100168 13385912 13386533 TCCGTC 6mer3-8 dme-miR-184-3p X - 13386335 13386388 stop_codon Yippee FlyBase G50597.1 GAGGCAGAGGGCTTTCCGTCGGAGGCCGCCACCACGAGTCATTGAGCCGATTGA 7 13386375 0.914543212 3 7 24 1 1 0.3 0.428571429 0.6 7 0 0 10 X:13386335-13386388 6 6.5 3843 FBgn0026749 336.1966667 36.58666667 56.19666667 0.019333922 0.17766035 0.115665223 1 1 1 0.15 dme-miR-304-5p 7mer-m8 TGAGATT X 13389068 13389074 + X_13389068_13389074_+ 0.52210701 0.613218413 0.567662712 0.064425489 CG1662 FBtr0342624 13388748 13389332 X + 13389034 13389084 3'utr CG1662 FlyBase G61116.1 CGGGCTAACAAACATGCGATGCGATGTGATGCGTTGAGATTGGAGGCGATG 7 13389068 0.959490653 4 7 35 1 0.954242509 0.444444444 0.142857143 0.333333333 7 0 0 9 X:13389034-13389084 7 CG1662 FBtr0342624 13388748 13389332 TGAGATT 7mer-m8 dme-miR-304-5p X + 13389059 13389084 3'utr CG1662 FlyBase G46147.1 GTGATGCGTTGAGATTGGAGGCGATG 5 13389067 0.708644764 3 4 24 0.833333333 0.698970004 0.5 0.2 0.333333333 5 1 0 5 X:13389059-13389084 7 5 3844 FBgn0030481 293.9633333 22.57333333 34.69666667 0.017008924 0.221500295 0.144106062 0 1 0.5 0.15 dme-miR-980-3p 6mer3-8 GGCAGC X 13389129 13389134 + X_13389129_13389134_+ 0.998604142 0.999443224 0.999023683 0.000593333 CG1662 FBtr0342624 13388748 13389332 X + 13389106 13389142 3'utr CG1662 FlyBase G61117.1 TTTTCACCTGATAAGCTCTGCTTGGCAGCGGTCTTAA 10 13389127 0.649378848 4 9 66 0.923076923 0.77815125 0.307692308 0.3 0.461538462 10 0 1 12 X:13389106-13389142 6 CG1662 FBtr0342624 13388748 13389332 GGCAGC 6mer3-8 dme-miR-980-3p X + 13389109 13389139 3'utr CG1662 FlyBase G46148.1 TCACCTGATAAGCTCTGCTTGGCAGCGGTCT 8 13389127 0.71628303 3 6 42 0.727272727 0.602059991 0.181818182 0.375 0.545454545 8 2 1 8 X:13389109-13389139 6 9 3845 FBgn0030481 293.9633333 22.57333333 34.69666667 0.030616063 0.398700532 0.259390912 2 2 2 0.15 dme-miR-7-5p 6mer2-7 TCTTCC X 13409149 13409154 + X_13409149_13409154_+ 0.999990934 0.999971586 0.99998126 1.36E-05 GstT4 FBtr0073778 13409034 13409323 X + 13409133 13409235 3'utr GstT4 FlyBase G61143.1 TTGTGATTATACTTGCTCTTCCTATCCAATAAGTCTTAGCCTTTCCATCACACTTGTTTTAACAATACCATTTGTGTCACGTAATGCTCATCTGTTTAAACGT 66 13409146 0.810226373 14 57 563 0.890243902 1.08517161 0.317073171 0.212121212 0.365853659 66 4 5 73 X:13409133-13409235 6 GstT4 FBtr0073778 13409034 13409323 TCTTCC 6mer2-7 dme-miR-7-5p X + 13409135 13409186 3'utr GstT4 FlyBase G46175.1 GTGATTATACTTGCTCTTCCTATCCAATAAGTCTTAGCCTTTCCATCACACT 27 13409146 0.708215918 9 25 238 0.9 1.255272505 0.05 0.37037037 0.575 27 3 1 36 X:13409135-13409186 6 26.5 3846 FBgn0030484 325.7333333 32.05333333 48.2 0.081354892 0.826747088 0.549792531 3 3 3 0.15 dme-miR-965-3p 8mer-A1 TACGCTTA X 13409307 13409314 + X_13409307_13409314_+ 0.614626471 0.594533445 0.604579958 0.014207967 GstT4 FBtr0073778 13409034 13409323 X + 13409251 13409325 3'utr GstT4 FlyBase G61144.1 AATCTTATATATAAACTTAGTTGTTAATTATGTATTTTAATTATTCGTATATAAAGTACGCTTATGTTTGTTTAA 47 13409307 0.989824585 7 43 431 0.95 1.45484486 0.183333333 0.255319149 0.416666667 47 2 1 57 X:13409251-13409325 8 GstT4 FBtr0073778 13409034 13409323 TACGCTTA 8mer-A1 dme-miR-965-3p X + 13409289 13409328 3'utr GstT4 FlyBase G46177.2 AATTATTCGTATATAAAGTACGCTTATGTTTGTTTAAATA 32 13409307 0.855569098 6 26 272 0.868421053 1.217483944 0.105263158 0.15625 0.289473684 32 4 1 33 X:13409289-13409328 8 37 3847 FBgn0030484 325.7333333 32.05333333 48.2 0.113589849 1.154326123 0.767634855 0 0 0 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT X 1344056 1344062 + X_1344056_1344062_+ 0.656118916 0.63664954 0.646384228 0.013766945 CG11412 FBtr0310619|FBtr0070209 1343942|1343942 1344770|1344770 X + 1344005 1344106 3'utr CG11412 FlyBase G57908.1 GCGCTCTGCGGAGGACCAGGGCGCTCCCCTCGTCCTGGGTCCTGGCCAGCTGGCAGCTTGTATCGGCGCCCTCTTTTTTGTACCTATTTAACTAGGAAGCAT 21 1344055 0.983582594 7 21 161 1 1.380211242 0.083333333 0.142857143 0.25 21 0 0 24 X:1344005-1344106 7 CG11412 FBtr0070209|FBtr0310619 1343942|1343942 1344770|1344770 GGCAGCT 7mer-m8 dme-miR-980-3p X + 1344033 1344101 3'utr CG11412 FlyBase G43808.2 CTCGTCCTGGGTCCTGGCCAGCTGGCAGCTTGTATCGGCGCCCTCTTTTTTGTACCTATTTAACTAGGA 8 1344055 0.983836558 2 7 64 0.9 0.954242509 0 0.25 0.4 8 1 0 9 X:1344033-1344101 7 8.5 3848 FBgn0024362 306.67 16.69 25.75666667 0.02771709 0.509286998 0.330011647 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 1350142 1350148 - X_1350142_1350148_- 0.640700628 0.716492876 0.678596752 0.053593249 CG12773 FBtr0070235|FBtr0070235|FBtr0070235|FBtr0342738|FBtr0342738|FBtr0342738|FBtr0332287|FBtr0332287|FBtr0332287 1349885|1349885|1349885|1349621|1349621|1349621|1349885|1349885|1349885 1350877|1350877|1350877|1350877|1350877|1350877|1350877|1350877|1350877 X - 1350127 1350162 3'utr CG12773 FlyBase G63979.1 TTCGAGGAGACATATGTGATACTGAGATAATAAGTG 19 1350140 0.777748911 3 17 97 0.962962963 1.414973348 0.518518519 0.263157895 0.481481481 19 1 0 26 X:1350127-1350162 7 CG12773 FBtr0332287|FBtr0332287|FBtr0332287|FBtr0342738|FBtr0342738|FBtr0342738|FBtr0070235|FBtr0070235|FBtr0070235 1349885|1349885|1349885|1349621|1349621|1349621|1349885|1349885|1349885 1350877|1350877|1350877|1350877|1350877|1350877|1350877|1350877|1350877 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 1350117 1350162 3'utr CG12773 FlyBase G48228.1 TTCGAGGAGACATATGTGATACTGAGATAATAAGTGAAACCAAAAC 17 1350140 0.925374563 3 17 93 1 1.361727836 0.47826087 0.352941176 0.52173913 17 0 0 23 X:1350117-1350162 7 18 3849 FBgn0024365 573.3566667 17.87333333 27.26333333 0.031394071 1.007086908 0.660227412 -8 -8 -8 0.15 dme-miR-276a-3p 6mer2-7 GTTCCT X 1350263 1350268 - X_1350263_1350268_- 0.921722853 0.784130995 0.852926924 0.097292166 CG12773 FBtr0070235|FBtr0342738|FBtr0332287 1349885|1349621|1349885 1350877|1350877|1350877 X - 1350223 1350281 3'utr CG12773 FlyBase G63980.1 ATTCTTTCGATGTGTTCCTTGCTCTCGTAGTTCTTCAACGATTACTCCTTAGTTGAGAG 10 1350262 0.867142976 4 9 99 0.923076923 1.079181246 0 0.3 0.461538462 10 1 0 12 X:1350223-1350281 6 CG12773 FBtr0332287|FBtr0342738|FBtr0070235 1349885|1349621|1349885 1350877|1350877|1350877 GTTCCT 6mer2-7 dme-miR-276a-3p X - 1350241 1350286 3'utr CG12773 FlyBase G48229.1 TTCGCATTCTTTCGATGTGTTCCTTGCTCTCGTAGTTCTTCAACGA 7 1350262 0.989628485 4 7 77 1 0.84509804 0 0 0 7 0 0 7 X:1350241-1350286 6 6.5 3850 FBgn0024365 573.3566667 17.87333333 27.26333333 0.011336748 0.363670272 0.238415454 -6 -6 -6 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 1350580 1350585 - X_1350580_1350585_- 0.998696251 0.937516369 0.96810631 0.043260722 CG12773 FBtr0070235|FBtr0070235|FBtr0070235|FBtr0342738|FBtr0342738|FBtr0342738|FBtr0332287|FBtr0332287|FBtr0332287 1349885|1349885|1349885|1349621|1349621|1349621|1349885|1349885|1349885 1350877|1350877|1350877|1350877|1350877|1350877|1350877|1350877|1350877 X - 1350424 1350682 3'utr CG12773 FlyBase G63982.1 TGTATTTGATGTATAGTTAGGATAGCGACAGCTGAGGTCACGATGGTAGTATTCCAAACTCGGTCTTAGTTCGTTTTGCTTTAACAAAATTTGGAGTCTGTGACGCATTTTAACTGGGACTCTCCCACGATGTAGTGCTTAGATAAGAAAATGTTGATAGTGTATTGATTTTTAGCTTTTTACTAGTTGTTAAAACGTTCGGAGGTCAGCCAAATCAGAGCACATTTCAGTTGCGGAGGCTCCATTCTGACCACAGCTG 29 1350592 0.981713208 19 28 224 0.96875 1.491361694 0.28125 0.103448276 0.1875 29 1 0 31 X:1350424-1350682 6 CG12773 FBtr0332287|FBtr0332287|FBtr0332287|FBtr0342738|FBtr0342738|FBtr0342738|FBtr0070235|FBtr0070235|FBtr0070235 1349885|1349885|1349885|1349621|1349621|1349621|1349885|1349885|1349885 1350877|1350877|1350877|1350877|1350877|1350877|1350877|1350877|1350877 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X - 1350568 1350610 3'utr CG12773 FlyBase G48231.1 GTTTTGCTTTAACAAAATTTGGAGTCTGTGACGCATTTTAACT 11 1350582 0.771061075 5 11 82 1 1.230448921 0.294117647 0.363636364 0.588235294 11 0 0 17 X:1350568-1350610 6 9 3851 FBgn0024365 573.3566667 17.87333333 27.26333333 0.015697036 0.503543454 0.330113706 7 -3 2 0.15 dme-miR-1008-3p 6mer2-7 GCTGTG X 1350806 1350811 - X_1350806_1350811_- 0.683409661 0.857866669 0.770638165 0.123359728 CG12773 FBtr0070235|FBtr0342738|FBtr0332287 1349885|1349621|1349885 1350877|1350877|1350877 X - 1350792 1350846 3'utr CG12773 FlyBase G63984.1 CTGTATGCGGGCCGGGCAACGGGGCAGGCGGCGTGGCTGTGGAAAGCAATAGTCG 70 1350813 0.958741793 3 61 146 0.934210526 1.374137094 0.302631579 0.057142857 0.131578947 70 3 2 71 X:1350792-1350846 6 CG12773 FBtr0332287|FBtr0342738|FBtr0070235 1349885|1349621|1349885 1350877|1350877|1350877 GCTGTG 6mer2-7 dme-miR-1008-3p X - 1350774 1350841 3'utr CG12773 FlyBase G48233.1 TGCGGGCCGGGCAACGGGGCAGGCGGCGTGGCTGTGGAAAGCAATAGTCGAGTGCATTTCTCTACCGC 75 1350813 0.962742969 3 73 159 0.991869919 2.086359831 0.333333333 0.466666667 0.674796748 75 1 0 122 X:1350774-1350841 6 68 3852 FBgn0024365 573.3566667 17.87333333 27.26333333 0.118599824 3.804550541 2.494192444 2 2 2 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA X 1356596 1356603 - X_1356596_1356603_- 0.500099381 0.500071946 0.500085664 1.94E-05 png FBtr0070234 1356486 1356657 X - 1356536 1356629 3'utr png FlyBase G63997.1 GAGGAGACCTCAACAAATATTTCATTGTACTTAAGAACTAGGCTAGCTTAAGCGATAAATTAAGGTGTGTGCTGTGCTTTGTGTGCGCCTGTGC 20 1356604 0.989153272 7 19 183 0.956521739 1.342422681 0.043478261 0.1 0.217391304 20 1 0 22 X:1356536-1356629 8 png FBtr0070234 1356486 1356657 GTACTTAA 8mer-A1 dme-miR-252-5p X - 1356575 1356618 3'utr png FlyBase G48241.1 AACAAATATTTCATTGTACTTAAGAACTAGGCTAGCTTAAGCGA 7 1356604 0.703754787 4 7 54 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 X:1356575-1356618 8 11 3853 FBgn0000826 56.66666667 6.136666667 9.246666667 0.194117647 1.792504074 1.18961788 1 1 1 0.15 dme-miR-317-3p 7mer-A1 GTGTTCA X 13590874 13590880 + X_13590874_13590880_+ 0.823100929 0.822148094 0.822624512 0.000673731 Tango13 FBtr0310433|FBtr0333723|FBtr0310432 13590373|13589952|13589952 13593224|13591760|13591760 X + 13590846 13590891 3'utr Tango13 FlyBase G61163.1 TTACTATTACCTTGATTACCAGCTAATCGTGTTCAATTGATAAGCT 44 13590872 0.792006086 8 39 425 0.867924528 1.361727836 0.433962264 0.159090909 0.301886792 44 6 1 46 X:13590846-13590891 7 Tango13 FBtr0310432|FBtr0333723|FBtr0310433 13589952|13589952|13590373 13591760|13591760|13593224 GTGTTCA 7mer-A1 dme-miR-317-3p X + 13590829 13590892 3'utr Tango13 FlyBase G46192.1 TGAAATGGTCAGTACAATTACTATTACCTTGATTACCAGCTAATCGTGTTCAATTGATAAGCTA 45 13590872 0.776597679 11 33 431 0.777777778 1.799340549 0.580246914 0.488888889 0.716049383 45 18 0 63 X:13590829-13590892 7 40 3854 FBgn0086674 1960.31 48.50666667 74.51333333 0.020404936 0.824628917 0.536816677 2 2 2 0.15 dme-miR-1012-3p 6mer3-8 TTGACT X 13591665 13591670 + X_13591665_13591670_+ 0.886861482 0.954004243 0.920432863 0.047477058 Tango13 FBtr0310433|FBtr0333723|FBtr0310432 13590373|13589952|13589952 13593224|13591760|13591760 X + 13591639 13591677 3'utr Tango13 FlyBase G61167.1 AACTTTTTTTTTTGTGTTGCAATAAATTGACTGAATGTA 22 13591665 0.866909578 6 21 185 0.92 1.361727836 0.4 0.136363636 0.24 22 2 0 23 X:13591639-13591677 6 Tango13 FBtr0310432|FBtr0333723|FBtr0310433 13589952|13589952|13590373 13591760|13591760|13593224 TTGACT 6mer3-8 dme-miR-1012-3p X + 13591646 13591686 3'utr Tango13 FlyBase G46196.1 TTTTTTGTGTTGCAATAAATTGACTGAATGTAAAGAAAACC 21 13591664 0.723449522 6 21 152 1 1.477121255 0.333333333 0.428571429 0.6 21 0 0 30 X:13591646-13591686 6 21.5 3855 FBgn0086674 1960.31 48.50666667 74.51333333 0.010967653 0.443238043 0.288538964 0 1 0.5 0.15 dme-miR-252-5p 7mer-m8 GTACTTA X 13592253 13592259 + X_13592253_13592259_+ 0.471878615 0.574893913 0.523386264 0.072842817 Tango13 FBtr0310433 13590373 13593224 X + 13592190 13592285 3'utr Tango13 FlyBase G61168.1 AGACACACGAGCCTTGTCCGTCCTAACTGCTGTGTGTGTGGGCGAACGGGATGGCTATATTATGTACTTACTTGCCGTTAGCTTTGTGCTCAAAGA 51 13592252 0.95608359 8 48 466 0.963636364 1.72427587 0.4 0.078431373 0.145454545 51 2 0 53 X:13592190-13592285 7 Tango13 FBtr0310433 13590373 13593224 GTACTTA 7mer-m8 dme-miR-252-5p X + 13592227 13592272 3'utr Tango13 FlyBase G46197.1 GTGGGCGAACGGGATGGCTATATTATGTACTTACTTGCCGTTAGCT 19 13592252 0.987410824 3 18 186 0.966666667 1.462397998 0.5 0.368421053 0.6 19 1 0 29 X:13592227-13592272 7 28.5 3856 FBgn0086674 1960.31 48.50666667 74.51333333 0.014538517 0.587548103 0.382481882 1 1 1 0.15 dme-miR-31a-5p 6mer2-7 CTTGCC X 13609379 13609384 + X_13609379_13609384_+ 0.53882713 0.968334079 0.753580604 0.303707312 CG11178 FBtr0073805|FBtr0345128 13608910|13608910 13609529|13609529 X + 13609351 13609422 3'utr CG11178 FlyBase G61176.1 ATTTATAGATACCTACGCTTAAGTTACCCTTGCCGTATTTACCCACCACTCAGTGTATACATATGTATAACC 21 13609380 0.983350508 6 19 148 0.958333333 1.06069784 0.041666667 0.095238095 0.208333333 21 0 1 23 X:13609351-13609422 6 CG11178 FBtr0345128|FBtr0073805 13608910|13608910 13609529|13609529 CTTGCC 6mer2-7 dme-miR-31a-5p X + 13609357 13609447 3'utr CG11178 FlyBase G46203.1 AGATACCTACGCTTAAGTTACCCTTGCCGTATTTACCCACCACTCAGTGTATACATATGTATAACCATGTAAAGCTAAACCGTTCCAAGTG 11 13609381 0.978469815 5 11 80 1 1.230448921 0.058823529 0.454545455 0.647058824 11 0 0 17 X:13609357-13609447 6 11.5 3857 FBgn0030499 466.3333333 18.44 28.13 0.024660472 0.623644252 0.40881621 -1 -2 -1.5 0.15 dme-miR-14-3p 6mer3-8 AAGACT X 13660541 13660546 + X_13660541_13660546_+ 0.999999994 0.999999985 0.999999989 0 NFAT FBtr0301451 13658114 13661942 X + 13660491 13660578 3'utr NFAT FlyBase G61197.1 AGTGAAAGGCACTCGGATTTTACGGACCTCTCCCTTAGCAATCCCCTTCCAAGACTTATTCTCAGAAACCTGACCTAGGATTAAGAGG 14 13660549 0.98117135 8 13 99 0.933333333 1.146128036 0.4 0.071428571 0.133333333 14 1 0 14 X:13660491-13660578 6 NFAT FBtr0301451 13658114 13661942 AAGACT 6mer3-8 dme-miR-14-3p X + 13660513 13660564 3'utr NFAT FlyBase G46216.1 CGGACCTCTCCCTTAGCAATCCCCTTCCAAGACTTATTCTCAGAAACCTGAC 10 13660549 0.977973821 5 10 70 1 1.113943352 0.076923077 0.2 0.384615385 10 0 0 13 X:13660513-13660564 6 9.5 3858 FBgn0030505 2159.646667 45.51666667 69.65666667 0.004398868 0.208714756 0.136383213 -8 -8 -8 0.15 dme-miR-34-5p 7mer-A1 ACTGCCA X 13663145 13663151 + X_13663145_13663151_+ 0.748159247 0.753244671 0.750701959 0.003595992 NFAT FBtr0073808|FBtr0301450|FBtr0345127|FBtr0301449|FBtr0340396|FBtr0112980 13662758|13662758|13662758|13662758|13658114|13662758 13663657|13663657|13663657|13664568|13663657|13663657 X + 13663092 13663172 5'utr NFAT FlyBase G61209.1 AAAAAACAAATGATGAACTTATCTCAAAAGGTTAAATTAAAACAATGATAACGACTGCCATATACCTATGAAATATGAAGT 65 13663138 0.747232815 10 58 328 0.890243902 1.86332286 0.085365854 0.169230769 0.341463415 65 9 0 73 X:13663092-13663172 7 NFAT FBtr0301449|FBtr0340396|FBtr0112980|FBtr0073808|FBtr0301450|FBtr0345127 13662758|13658114|13662758|13662758|13662758|13662758 13664568|13663657|13663657|13663657|13663657|13663657 ACTGCCA 7mer-A1 dme-miR-34-5p X + 13663099 13663185 5'utr NFAT FlyBase G46224.1 AAATGATGAACTTATCTCAAAAGGTTAAATTAAAACAATGATAACGACTGCCATATACCTATGAAATATGAAGTGAAATCCCGAAAG 46 13663139 0.969119468 9 43 235 0.9375 1.477121255 0.09375 0.391304348 0.5625 46 3 1 60 X:13663099-13663185 7 35.5 3859 FBgn0030505 2159.646667 45.51666667 69.65666667 0.016437874 0.77993409 0.509642532 7 6 6.5 0.15 dme-miR-14-3p 6mer3-8 AAGACT X 13663533 13663538 + X_13663533_13663538_+ 0.536163537 0.527731376 0.531947456 0.005962395 NFAT FBtr0073808|FBtr0301450|FBtr0345127|FBtr0301449|FBtr0340396|FBtr0112980 13662758|13662758|13662758|13662758|13658114|13662758 13663657|13663657|13663657|13664568|13663657|13663657 X + 13663495 13663561 5'utr NFAT FlyBase G61211.1 TGTAGCTACGAATATAATGAATATGCGAGAAATTCCAAAAGACTTTTGATTTAAAGAAAATGCAATT 146 13663540 0.644073639 9 143 939 0.983516484 2.252853031 0.115384615 0.178082192 0.340659341 146 3 0 179 X:13663495-13663561 6 NFAT FBtr0301449|FBtr0340396|FBtr0112980|FBtr0073808|FBtr0301450|FBtr0345127 13662758|13658114|13662758|13662758|13662758|13662758 13664568|13663657|13663657|13663657|13663657|13663657 AAGACT 6mer3-8 dme-miR-14-3p X + 13663502 13663553 5'utr NFAT FlyBase G46226.1 ACGAATATAATGAATATGCGAGAAATTCCAAAAGACTTTTGATTTAAAGAAA 96 13663540 0.625608967 8 94 619 0.985815603 2.1430148 0.113475177 0.364583333 0.567375887 96 2 0 139 X:13663502-13663553 6 112.5 3860 FBgn0030505 2159.646667 45.51666667 69.65666667 0.052091855 2.471622116 1.615064363 -7 -7 -7 0.15 dme-miR-932-5p 6mer2-7 GAATTG X 13664246 13664251 + X_13664246_13664251_+ 0.999999977 0.99999714 0.999998559 2.05E-06 NFAT FBtr0301449 13662758 13664568 X + 13664217 13664266 3'utr NFAT FlyBase G61214.2 GAGAGAGAGAGCGAAGAGCTCGCGCTTAAGAATTGTTAGTGTTAAATGTT 66 13664252 0.982067367 6 63 547 0.96 1.857332496 0.493333333 0.106060606 0.213333333 66 3 0 72 X:13664217-13664266 6 NFAT FBtr0301449 13662758 13664568 GAATTG 6mer2-7 dme-miR-932-5p X + 13664216 13664265 3'utr NFAT FlyBase G46229.1 AGAGAGAGAGAGCGAAGAGCTCGCGCTTAAGAATTGTTAGTGTTAAATGT 31 13664252 0.983544032 4 30 233 0.977777778 1.643452676 0.511111111 0.419354839 0.6 31 1 0 44 X:13664216-13664265 6 46 3861 FBgn0030505 2159.646667 45.51666667 69.65666667 0.021299781 1.010618821 0.660381873 -6 -6 -6 0.15 dme-miR-31a-5p 6mer3-8 TCTTGC X 13684305 13684310 + X_13684305_13684310_+ 0.722316255 0.877148372 0.799732314 0.109482828 CG11158 FBtr0073812 13684066 13684616 X + 13684284 13684319 3'utr CG11158 FlyBase G61216.1 CGAGTGATTGGCCAAATGATCTCTTGCATCACTATA 8 13684300 0.807112288 2 8 58 1 1.079181246 0.25 0.375 0.583333333 8 0 0 12 X:13684284-13684319 6 CG11158 FBtr0073812 13684066 13684616 TCTTGC 6mer3-8 dme-miR-31a-5p X + 13684282 13684317 3'utr CG11158 FlyBase G46230.1 TACGAGTGATTGGCCAAATGATCTCTTGCATCACTA 11 13684300 0.78245223 3 11 81 1 1.380211242 0 0.636363636 0.833333333 11 0 0 24 X:13684282-13684317 6 9.5 3862 FBgn0030511 119.0866667 8.99 13.68666667 0.079773834 1.0567297 0.694106186 5 5 5 0.15 dme-miR-1006-3p 6mer2-7 GAATTT X 13684451 13684456 - X_13684451_13684456_- 0.999999898 0.999999382 0.99999964 3.54E-07 CG9940 FBtr0073844 13684378 13685808 X - 13684417 13684478 3'utr CG9940 FlyBase G67256.1 ATGTAGATTTATAGCACATTGTGAATTTGAACACTCGCATCAGATCGATTTAATGGAACACT 12 13684460 0.986281462 5 12 102 1 1.146128036 0.071428571 0.166666667 0.285714286 12 0 0 14 X:13684417-13684478 6 CG9940 FBtr0073844 13684378 13685808 GAATTT 6mer2-7 dme-miR-1006-3p X - 13684442 13684482 3'utr CG9940 FlyBase G50633.1 AAGCATGTAGATTTATAGCACATTGTGAATTTGAACACTCG 7 13684452 0.847391069 5 7 58 1 1.113943352 0 0.428571429 0.692307692 7 0 0 13 X:13684442-13684482 6 8.5 3863 FBgn0030512 1001.65 27.86666667 42.76666667 0.008485998 0.305023923 0.198752923 4 -4 0 0.15 dme-miR-307a-3p 7mer-m8 GGTTGTG X 13685072 13685078 - X_13685072_13685078_- 0.702971699 0.702972009 0.702971854 2.12E-07 CG9940 FBtr0343352|FBtr0073844|FBtr0073845 13684551|13684378|13684551 13685808|13685808|13685808 X - 13685060 13685087 3'utr CG9940 FlyBase G67258.1 TGTGTTATTGGTTGTGTACGGTGCGGCT 6 13685073 0.656934328 3 5 56 1 0.954242509 0.444444444 0.333333333 0.555555556 6 0 0 9 X:13685060-13685087 7 CG9940 FBtr0073845|FBtr0343352|FBtr0073844 13684551|13684551|13684378 13685808|13685808|13685808 GGTTGTG 7mer-m8 dme-miR-307a-3p X - 13685059 13685088 3'utr CG9940 FlyBase G50634.1 TTGTGTTATTGGTTGTGTACGGTGCGGCTT 5 13685079 0.739103348 2 3 45 0.5 0.602059991 0.125 0.4 0.625 5 4 0 4 X:13685059-13685088 7 5 3864 FBgn0030512 1001.65 27.86666667 42.76666667 0.004991764 0.179425837 0.116913484 -5 1 -2 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 13717793 13717798 + X_13717793_13717798_+ 0.983243564 0.970717007 0.976980286 0.008857644 NnaD FBtr0340678|FBtr0340680|FBtr0340679 13717605|13717605|13717605 13717835|13717835|13717835 X + 13717776 13717808 3'utr NnaD FlyBase G61229.1 ATGTAAACCCGATCTCTGTACCTACAGTTAATC 9 13717792 0.833073886 2 8 52 0.888888889 0.903089987 0 0 0 9 1 0 8 X:13717776-13717808 6 NnaD FBtr0340680|FBtr0340678|FBtr0340679 13717605|13717605|13717605 13717835|13717835|13717835 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X + 13717749 13717802 3'utr NnaD FlyBase G46244.1 TAACACCTATAGGCGTATTTTATGCATATGTAAACCCGATCTCTGTACCTACAG 9 13717792 0.967355905 4 9 53 1 1.146128036 0.285714286 0.333333333 0.571428571 9 0 0 14 X:13717749-13717802 6 8 3865 FBgn0265726 100.7866667 2.52 3.85 0.079375579 3.174603175 2.077922078 1 1 1 0.15 dme-miR-79-3p 7mer-m8 TAGCTTT X 13719126 13719132 - X_13719126_13719132_- 0.620177581 0.620202999 0.62019029 1.80E-05 CG9941 FBtr0073843 13718732 13719175 X - 13719108 13719151 3'utr CG9941 FlyBase G67268.2 GAAATTCGTTTTCTCGTTTTAGCTTTGCGTTTATACTATTTATT 11 13719130 0.610710672 4 8 125 0.866666667 1.113943352 0.333333333 0.181818182 0.4 11 2 0 13 X:13719108-13719151 7 CG9941 FBtr0073843 13718732 13719175 TAGCTTT 7mer-m8 dme-miR-79-3p X - 13719086 13719145 3'utr CG9941 FlyBase G50639.1 CGTTTTCTCGTTTTAGCTTTGCGTTTATACTATTTATTCGGAGTTCACCTAGATTTAGTT 6 13719133 0.98966561 4 6 60 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 X:13719086-13719145 7 6.5 3866 FBgn0030514 1053.746667 41.08333333 63.20333333 0.006168466 0.15821501 0.102842677 -2 1 -0.5 0.15 dme-miR-79-3p 6mer2-7 AGCTTT X 13736887 13736892 - X_13736887_13736892_- 0.999984665 0.996600606 0.998292635 0.00239292 Grip91 FBtr0073841 13736568 13737101 X - 13736861 13736900 3'utr Grip91 FlyBase G67297.1 ATATCTCAAGCTTTGCCGTCAATCGCCTGGCTGCAAGCCA 13 13736887 0.677060716 5 13 74 1 1.230448921 0.117647059 0.230769231 0.411764706 13 0 0 17 X:13736861-13736900 6 Grip91 FBtr0073841 13736568 13737101 AGCTTT 6mer2-7 dme-miR-79-3p X - 13736822 13736892 3'utr Grip91 FlyBase G50656.1 AGCTTTGCCGTCAATCGCCTGGCTGCAAGCCATCAACTTAAGATATCTCCAATACAAAATTATTGAGTAGT 6 13736889 0.97645154 5 6 39 1 0.954242509 0 0.5 0.666666667 6 0 0 9 X:13736822-13736892 6 7.5 3867 FBgn0001612 613.5433333 20.81666667 31.92333333 0.012224075 0.360288231 0.234937872 -5 -3 -4 0.15 dme-miR-980-3p 6mer3-8 GGCAGC X 1373777 1373782 + X_1373777_1373782_+ 0.997796091 0.997644338 0.997720214 0.000107339 ssx FBtr0339773|FBtr0339774|FBtr0339772|FBtr0070215 1373350|1373114|1371989|1373114 1374677|1375257|1374677|1374677 X + 1373766 1373795 3'utr ssx FlyBase G57923.1 ATCCAAGCATTGGCAGCAAGAGGCAAAGCA 6 1373776 0.635036294 2 6 7 1 0.903089987 0.25 0.166666667 0.375 6 0 0 8 X:1373766-1373795 6 ssx FBtr0339772|FBtr0070215|FBtr0339773|FBtr0339774 1371989|1373114|1373350|1373114 1374677|1374677|1374677|1375257 GGCAGC 6mer3-8 dme-miR-980-3p X + 1373763 1373801 3'utr ssx FlyBase G43819.1 CAAATCCAAGCATTGGCAGCAAGAGGCAAAGCAAAGGTG 16 1373776 0.704403669 2 15 24 0.96 1.380211242 0.08 0.4375 0.64 16 1 0 24 X:1373763-1373801 6 11 3868 FBgn0024987 898.8266667 36.91666667 56.86333333 0.012238177 0.297968397 0.193446275 1 1 1 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG X 1373900 1373905 + X_1373900_1373905_+ 0.986297446 0.891092732 0.938695089 0.067319889 ssx FBtr0339773|FBtr0339774|FBtr0339772|FBtr0070215 1373350|1373114|1371989|1373114 1374677|1375257|1374677|1374677 X + 1373878 1373909 3'utr ssx FlyBase G57924.1 TTAAGATGTACGAAATAATGTTCCAAAGTTAA 7 1373896 0.683887484 2 6 38 0.875 0.84509804 0.125 0.142857143 0.25 7 1 0 7 X:1373878-1373909 6 ssx FBtr0339772|FBtr0070215|FBtr0339773|FBtr0339774 1371989|1373114|1373350|1373114 1374677|1374677|1374677|1375257 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" X + 1373836 1373910 3'utr ssx FlyBase G43820.1 TCACAGAATTAAGCAGAGCAAATTAAAGATGCATAGCGTGTATTAAGATGTACGAAATAATGTTCCAAAGTTAAC 7 1373897 0.96243298 5 6 37 1 1.204119983 0.3125 0.857142857 0.9375 7 0 0 16 X:1373836-1373910 6 5.5 3869 FBgn0024987 898.8266667 36.91666667 56.86333333 0.006119089 0.148984199 0.096723137 4 3 3.5 0.15 dme-miR-2535b-3p 8mer-A1 CCGTGAGA X 1374558 1374565 + X_1374558_1374565_+ 0.638222567 0.641332417 0.639777492 0.002198961 ssx FBtr0339773|FBtr0339774|FBtr0339772|FBtr0070215 1373350|1373114|1371989|1373114 1374677|1375257|1374677|1374677 X + 1374454 1374582 3'utr ssx FlyBase G57928.1 ATGAATGATGTATAAATACCCGAACTTCGGGTAAACTTCCAACAGAAACCCGACAAGAAGATGGCTGAATATGAAATAAACTTGAAATTTTCCAACCAGCATACCCGTGAGACCCAGAGGTCCGAAATT 36 1374555 0.964340804 9 36 119 1 1.643452676 0.25 0.166666667 0.318181818 36 0 0 44 X:1374454-1374582 8 ssx FBtr0339772|FBtr0070215|FBtr0339773|FBtr0339774 1371989|1373114|1373350|1373114 1374677|1374677|1374677|1375257 CCGTGAGA 8mer-A1 dme-miR-2535b-3p X + 1374537 1374579 3'utr ssx FlyBase G43824.1 GAAATTTTCCAACCAGCATACCCGTGAGACCCAGAGGTCCGAA 14 1374555 0.837149664 3 11 36 0.8 1.204119983 0.05 0.357142857 0.55 14 4 0 16 X:1374537-1374579 8 16 3870 FBgn0024987 898.8266667 36.91666667 56.86333333 0.017800985 0.433408578 0.2813764 3 3 3 0.15 dme-miR-1012-3p 6mer3-8 TTGACT X 13745971 13745976 - X_13745971_13745976_- 0.99284087 0.957406082 0.975123476 0.025056187 Pdcd4 FBtr0331711|FBtr0331712|FBtr0112981 13745575|13745575|13745575 13746775|13746775|13746775 X - 13745958 13746027 3'utr Pdcd4 FlyBase G67310.1 TTATGCTATCAACGCAATCAAAACTCTGATGATTACACAAAACAAATTCCATTGACTTGAAATTGAGAAA 19 13745976 0.973292224 8 18 110 0.956521739 1.342422681 0.043478261 0.210526316 0.347826087 19 1 0 22 X:13745958-13746027 6 Pdcd4 FBtr0112981|FBtr0331712|FBtr0331711 13745575|13745575|13745575 13746775|13746775|13746775 TTGACT 6mer3-8 dme-miR-1012-3p X - 13745963 13746013 3'utr Pdcd4 FlyBase G50665.1 CAATCAAAACTCTGATGATTACACAAAACAAATTCCATTGACTTGAAATTG 12 13745979 0.756968307 7 12 67 1 1.278753601 0 0.25 0.526315789 12 0 0 19 X:13745963-13746013 6 10 3871 FBgn0030520 6370.806667 230.15 350.2466667 0.00156966 0.043449924 0.028551307 0 3 1.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC X 1374620 1374625 + X_1374620_1374625_+ 0.999973426 0.999999764 0.999986595 1.87E-05 ssx FBtr0339773|FBtr0339774|FBtr0339772|FBtr0070215 1373350|1373114|1371989|1373114 1374677|1375257|1374677|1374677 X + 1374606 1374660 3'utr ssx FlyBase G57929.1 TCTAAACGTAAATCCTAGTCTCGTAGCAATATCATAGTTAAGGTGACTTTTTTTT 15 1374618 0.722758516 5 14 108 0.952380952 1.301029996 0.238095238 0.2 0.428571429 15 1 0 20 X:1374606-1374660 6 ssx FBtr0339772|FBtr0070215|FBtr0339773|FBtr0339774 1371989|1373114|1373350|1373114 1374677|1374677|1374677|1375257 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" X + 1374584 1374649 3'utr ssx FlyBase G43825.1 TTTTTTTTTAGTATTGATAATCTCTAAACGTAAATCCTAGTCTCGTAGCAATATCATAGTTAAGGT 11 1374626 0.985095887 4 9 80 0.833333333 1.176091259 0.166666667 0.545454545 0.722222222 11 3 0 15 X:1374584-1374649 6 10 3872 FBgn0024987 898.8266667 36.91666667 56.86333333 0.011125616 0.270880361 0.17586025 2 -6 -2 0.15 dme-bantam-3p 7mer-m8 TGATCTC X 13746439 13746445 - X_13746439_13746445_- 0.630670161 0.646196488 0.638433324 0.010978752 Pdcd4 FBtr0331711|FBtr0331712|FBtr0112981 13745575|13745575|13745575 13746775|13746775|13746775 X - 13746421 13746471 3'utr Pdcd4 FlyBase G67313.2 AAAAAAACAAACAATCAATCGGAATTTGATCTCCGTTTAAACTATATTCAT 243 13746446 0.79898818 11 230 2021 0.962068966 1.968482949 0.065517241 0.164609053 0.3 243 9 2 279 X:13746421-13746471 7 Pdcd4 FBtr0112981|FBtr0331712|FBtr0331711 13745575|13745575|13745575 13746775|13746775|13746775 TGATCTC 7mer-m8 dme-bantam-3p X - 13746389 13746469 3'utr Pdcd4 FlyBase G50669.1 AAAAACAAACAATCAATCGGAATTTGATCTCCGTTTAAACTATATTCATTATTATACTACATAAACACCTACAACGTATAT 169 13746446 0.985687804 11 166 1380 0.966942149 2.369215857 0.074380165 0.349112426 0.545454545 169 8 0 234 X:13746389-13746469 7 201.5 3873 FBgn0030520 6370.806667 230.15 350.2466667 0.031628648 0.875515968 0.57530883 1 1 1 0.15 dme-miR-184-5p 6mer3-8 TGATAA X 13746543 13746548 - X_13746543_13746548_- 0.930408191 0.99995311 0.96518065 0.04917567 Pdcd4 FBtr0331711|FBtr0331712|FBtr0112981 13745575|13745575|13745575 13746775|13746775|13746775 X - 13746502 13746563 3'utr Pdcd4 FlyBase G67314.1 AATTTGTCGCAAACTTGATAAAAAGAACTTATCCTCAGAATCCAGATAAGGACACAAACGAA 26 13746549 0.96228468 6 23 118 0.90625 1.161368002 0.15625 0.192307692 0.34375 26 2 1 29 X:13746502-13746563 6 Pdcd4 FBtr0112981|FBtr0331712|FBtr0331711 13745575|13745575|13745575 13746775|13746775|13746775 TGATAA 6mer3-8 dme-miR-184-5p X - 13746508 13746561 3'utr Pdcd4 FlyBase G50670.1 TTTGTCGCAAACTTGATAAAAAGAACTTATCCTCAGAATCCAGATAAGGACACA 19 13746549 0.758555152 7 19 108 1 1.431363764 0.185185185 0.368421053 0.555555556 19 0 0 27 X:13746508-13746561 6 15.5 3874 FBgn0030520 6370.806667 230.15 350.2466667 0.002432973 0.067347382 0.044254525 1 1 1 0.15 dme-miR-317-3p 6mer3-8 TGTGTT X 13774084 13774089 + X_13774084_13774089_+ 0.999809982 0.981027728 0.990418855 0.013281092 rdgB FBtr0301532 13773981 13775189 X + 13774000 13774106 3'utr rdgB FlyBase G61262.1 CTGGCGCTGCTAGAGACGATCCACTGTACAGAGCGCACCCACTGTAACGCCCGATCCTCGCTGTGTATATATGTATCCTGTGTTTGTGTTTAGTGTAAATAGGTCAA 8 13774085 0.991785123 5 6 64 0.888888889 0.903089987 0.111111111 0.125 0.222222222 8 1 0 8 X:13774000-13774106 6 rdgB FBtr0301532 13773981 13775189 TGTGTT 6mer3-8 dme-miR-317-3p X + 13774029 13774107 3'utr rdgB FlyBase G46264.1 AGAGCGCACCCACTGTAACGCCCGATCCTCGCTGTGTATATATGTATCCTGTGTTTGTGTTTAGTGTAAATAGGTCAAC 9 13774083 0.988262605 7 8 75 0.875 1.146128036 0.5625 0.666666667 0.8125 9 2 0 14 X:13774029-13774107 6 5 3875 FBgn0003218 381.5 8.42 12.83 0.01310616 0.593824228 0.389711613 -1 1 0 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 13774428 13774433 + X_13774428_13774433_+ 0.97153798 0.999999998 0.985768989 0.020125673 rdgB FBtr0301532|FBtr0301532|FBtr0301532 13773981|13773981|13773981 13775189|13775189|13775189 X + 13774388 13774453 3'utr rdgB FlyBase G61263.1 ATTCCATTGGAAACTGCTTTGTTGGTGTTTAGACATTTTTCTGTGACTTTCTGTTGTTCTCTGTTT 8 13774449 0.99426576 5 7 92 0.777777778 0.84509804 0.111111111 0.125 0.222222222 8 2 0 7 X:13774388-13774453 6 rdgB FBtr0301532|FBtr0301532|FBtr0301532 13773981|13773981|13773981 13775189|13775189|13775189 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X + 13774395 13774452 3'utr rdgB FlyBase G46265.1 TGGAAACTGCTTTGTTGGTGTTTAGACATTTTTCTGTGACTTTCTGTTGTTCTCTGTT 6 13774437 0.992424449 6 6 75 1 1 0.5 0.333333333 0.6 6 0 0 10 X:13774395-13774452 6 6 3876 FBgn0003218 381.5 8.42 12.83 0.015727392 0.712589074 0.467653936 -21 -9 -15 0.15 dme-miR-8-3p 6mer2-7 AGTATT X 13780036 13780041 - X_13780036_13780041_- 0.984658336 0.980137764 0.98239805 0.003196476 CtsB1 FBtr0073838|FBtr0346091 13780014|13779845 13780176|13780176 X - 13780015 13780130 3'utr CtsB1 FlyBase G67327.1 ATTTTCTATCATCCCTCCTTTTATTTTCATTCCGATTCGCAACTGACGTTTGTAGTTAATGTAAACAACCTAAACCTGATTGATAATAAAGTATTGTATATGACTGTGGAACTGTA 221 13780060 0.897414174 26 207 1495 0.925531915 1.51355052 0.088652482 0.20361991 0.375886525 221 14 7 261 X:13780015-13780130 6 CtsB1 FBtr0346091|FBtr0073838 13779845|13780014 13780176|13780176 AGTATT 6mer2-7 dme-miR-8-3p X - 13780015 13780130 3'utr CtsB1 FlyBase G50687.1 ATTTTCTATCATCCCTCCTTTTATTTTCATTCCGATTCGCAACTGACGTTTGTAGTTAATGTAAACAACCTAAACCTGATTGATAATAAAGTATTGTATATGACTGTGGAACTGTA 136 13780051 0.81546364 23 128 896 0.930348259 2.271841607 0.084577114 0.338235294 0.552238806 136 14 0 187 X:13780015-13780130 6 76.5 3877 FBgn0030521 559.3 47.37666667 71.83333333 0.136778116 1.614718919 1.064965197 19 10 14.5 0.15 dme-miR-283-5p 6mer3-8 TGATAT X 13780145 13780150 - X_13780145_13780150_- 0.896947724 0.927937504 0.912442614 0.021913098 CtsB1 FBtr0073838|FBtr0346091 13780014|13779845 13780176|13780176 X - 13780134 13780209 stop_codon CtsB1 FlyBase G67328.1 AGCTCCATTTCGGCGGGTCTGCCCAAGCTGTAAATGTTATATGTATTCCGGCATCAAGCTGATATATCAAAACCCC 31 13780150 0.972610876 8 29 169 0.941176471 1.505149978 0.088235294 0.096774194 0.176470588 31 2 0 32 X:13780134-13780209 6 CtsB1 FBtr0346091|FBtr0073838 13779845|13780014 13780176|13780176 TGATAT 6mer3-8 dme-miR-283-5p X - 13780134 13780204 stop_codon CtsB1 FlyBase G50688.1 CATTTCGGCGGGTCTGCCCAAGCTGTAAATGTTATATGTATTCCGGCATCAAGCTGATATATCAAAACCCC 24 13780150 0.958309393 7 24 116 1 1.505149978 0.09375 0.291666667 0.46875 24 0 0 32 X:13780134-13780204 6 22 3878 FBgn0030521 559.3 47.37666667 71.83333333 0.039334883 0.464363611 0.306264501 0 0 0 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 13807165 13807171 + X_13807165_13807171_+ 0.661615116 0.661615511 0.661615314 2.83E-07 inaE FBtr0073826 13805478 13807627 X + 13807148 13807187 3'utr inaE FlyBase G61282.1 AATTATGTTAAACGTTATCTAGTCTAAGGCCAACTATCGC 7 13807172 0.973002182 4 7 45 1 0.84509804 0 0 0 7 0 0 7 X:13807148-13807187 7 inaE FBtr0073826 13805478 13807627 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X + 13807152 13807187 3'utr inaE FlyBase G46278.1 ATGTTAAACGTTATCTAGTCTAAGGCCAACTATCGC 5 13807172 0.970308173 3 4 29 1 0.903089987 0 0.4 0.625 5 0 0 8 X:13807152-13807187 7 5 3879 FBgn0261244 812.34 24.45 37.46 0.006155058 0.204498978 0.133475707 -7 -7 -7 0.15 dme-miR-277-3p 7mer-m8 TGCATTT X 13807495 13807501 + X_13807495_13807501_+ 0.619605979 0.473167476 0.546386727 0.103547656 inaE FBtr0073826 13805478 13807627 X + 13807483 13807520 3'utr inaE FlyBase G61284.1 ACAGATGTAATTTGCATTTCGTTTTCAAAATCTCCGTG 6 13807494 0.922686575 2 5 49 0.833333333 0.698970004 0.166666667 0 0 6 1 0 5 X:13807483-13807520 7 inaE FBtr0073826 13805478 13807627 TGCATTT 7mer-m8 dme-miR-277-3p X + 13807460 13807550 3'utr inaE FlyBase G46280.1 TGTCCATTTATTGTTTAAGTTGAACAGATGTAATTTGCATTTCGTTTTCAAAATCTCCGTGTTTAAATCACGCTCTCCAAATATCTCTTAT 11 13807494 0.984307269 9 11 90 1 1.204119983 0 0.272727273 0.5 11 0 0 16 X:13807460-13807550 7 5 3880 FBgn0261244 812.34 24.45 37.46 0.006155058 0.204498978 0.133475707 1 1 1 0.15 dme-miR-1012-3p 6mer3-8 TTGACT X 13813411 13813416 - X_13813411_13813416_- 0.763227791 0.778998339 0.771113065 0.011151427 Clic FBtr0073835 13812969 13813727 X - 13813391 13813444 3'utr Clic FlyBase G67339.1 ACACCAGCCACAATCTATCGAGAAGGCTTTGACTTACTTGGCCCGCCTGCATGT 32 13813407 0.960403298 7 30 198 0.95 1.579783597 0.3 0.1875 0.35 32 2 0 38 X:13813391-13813444 6 Clic FBtr0073835 13812969 13813727 TTGACT 6mer3-8 dme-miR-1012-3p X - 13813392 13813430 3'utr Clic FlyBase G50698.1 CTATCGAGAAGGCTTTGACTTACTTGGCCCGCCTGCATG 21 13813407 0.736937256 6 20 130 0.96 1.380211242 0.36 0.19047619 0.32 21 1 0 24 X:13813392-13813430 6 25.5 3881 FBgn0030529 12555.19667 953.18 1456.586667 0.002031032 0.026752555 0.017506682 -9 -9 -9 0.15 dme-miR-8-3p 6mer2-7 AGTATT X 13831402 13831407 - X_13831402_13831407_- 0.994951848 0.982965419 0.988958634 0.008475665 AMPdeam FBtr0309245 13830739 13834641 X - 13831344 13831525 5'utr AMPdeam FlyBase G67370.1 CTGTTGCGCAAAGTGCCCGTGCTGCAGTATCTGTATTATCTGACCCAGATTGGCATCGCCATGTCGCCGCTGTCGAACAACTCCCTGTTCCTCAACTATCATCGCAATCCGCTGCCAGAGTATTTGGCCCGTGGCCTCATCATTTCCCTCTCCACGGATGATCCCTTGCAATTCCACTTCAC 103 13831418 0.855457579 23 98 665 0.960629921 1.785329835 0.173228346 0.184466019 0.338582677 103 4 1 122 X:13831344-13831525 6 AMPdeam FBtr0309245 13830739 13834641 AGTATT 6mer2-7 dme-miR-8-3p X - 13831386 13831521 5'utr AMPdeam FlyBase G50721.1 TGCGCAAAGTGCCCGTGCTGCAGTATCTGTATTATCTGACCCAGATTGGCATCGCCATGTCGCCGCTGTCGAACAACTCCCTGTTCCTCAACTATCATCGCAATCCGCTGCCAGAGTATTTGGCCCGTGGCCTCAT 53 13831418 0.86398262 14 46 322 0.886075949 1.84509804 0.215189873 0.377358491 0.582278481 53 9 0 70 X:13831386-13831521 6 34.5 3882 FBgn0052626 1047.716667 41.85666667 63.94666667 0.03292875 0.824241459 0.539512093 11 11 11 0.15 dme-miR-305-5p 8mer-m1 AGTACAAT X 13832301 13832308 - X_13832301_13832308_- 0.57011992 0.570361545 0.570240733 0.000170837 AMPdeam FBtr0309245 13830739 13834641 X - 13832279 13832366 5'utr AMPdeam FlyBase G67376.1 ATGTTGGACGTCCATGCCGATCGCAACACGTTCCATCGCTTCGACAAGTTTAACTCCAAGTACAATCCCATCGGGGAGTCGCGGCTCA 17 13832302 0.847476229 7 13 83 0.789473684 0.698970004 0.157894737 0.058823529 0.157894737 17 2 2 15 X:13832279-13832366 8 AMPdeam FBtr0309245 13830739 13834641 AGTACAAT 8mer-m1 dme-miR-305-5p X - 13832224 13832320 5'utr AMPdeam FlyBase G50726.1 AGTTTAACTCCAAGTACAATCCCATCGGGGAGTCGCGGCTCAGGGAAGTCTTCCTGAAGACGGACAACTATCTGAATGGCAAATACTTTGCACAGAT 12 13832297 0.957759835 9 12 60 1 1.278753601 0 0.416666667 0.631578947 12 0 0 19 X:13832224-13832320 8 7.5 3883 FBgn0052626 1047.716667 41.85666667 63.94666667 0.007158424 0.179182926 0.117285238 -6 -11 -8.5 0.15 dme-miR-1008-3p 7mer-m8 AGCTGTG X 13851202 13851208 - X_13851202_13851208_- 0.624117863 0.651086946 0.637602404 0.019069963 mamo FBtr0346001|FBtr0346002 13846114|13850846 13854098|13854098 X - 13851188 13851222 3'utr mamo FlyBase G67389.1 AACAACAAGCTGTGAGCTGTGTATGTGAATGAATT 7 13851195 0.818136081 6 7 43 1 0.903089987 0.375 0.142857143 0.25 7 0 0 8 X:13851188-13851222 7 mamo FBtr0346001|FBtr0346002 13846114|13850846 13854098|13854098 AGCTGTG 7mer-m8 dme-miR-1008-3p X - 13851189 13851231 3'utr mamo FlyBase G50738.1 AACAACAACAACAACAAGCTGTGAGCTGTGTATGTGAATGAAT 5 13851205 0.958484462 3 5 27 1 0.77815125 0 0.2 0.333333333 5 0 0 6 X:13851189-13851231 7 6 3884 FBgn0267033 6198.503333 82.32 126.9666667 0.000967976 0.072886297 0.047256498 -13 -3 -8 0.15 dme-miR-305-5p 7mer-A1 GTACAAA X 13853450 13853456 - X_13853450_13853456_- 0.782908662 0.782741519 0.78282509 0.000118228 mamo FBtr0346001|FBtr0346002 13846114|13850846 13854098|13854098 X - 13853443 13853493 3'utr mamo FlyBase G67397.1 TTTACACCGATCTATAGAAGCTAACTAGCAACAATTTGTACAAAACAAACA 17 13853458 0.879365182 4 17 80 1 1.255272505 0.055555556 0.058823529 0.111111111 17 0 0 18 X:13853443-13853493 7 mamo FBtr0346001|FBtr0346002 13846114|13850846 13854098|13854098 GTACAAA 7mer-A1 dme-miR-305-5p X - 13853444 13853491 3'utr mamo FlyBase G50744.1 TACACCGATCTATAGAAGCTAACTAGCAACAATTTGTACAAAACAAAC 10 13853458 0.937335942 4 10 43 1 1.176091259 0 0.3 0.533333333 10 0 0 15 X:13853444-13853491 7 8.5 3885 FBgn0267033 6198.503333 82.32 126.9666667 0.001371299 0.103255588 0.066946705 2 2 2 0.15 dme-miR-282-5p 6mer2-7 GAGGCT X 13860274 13860279 - X_13860274_13860279_- 0.984969214 0.971224284 0.978096749 0.009719112 mamo FBtr0346003 13858015 13869553 X - 13860241 13860291 3'utr mamo FlyBase G67402.1 AAGTTCCCTATTGAGGCTCATTCATAAATAATTTTACGAATAATTTTTAAC 7 13860280 0.979979007 3 7 54 1 0.903089987 0 0.142857143 0.25 7 0 0 8 X:13860241-13860291 6 mamo FBtr0346003 13858015 13869553 GAGGCT 6mer2-7 dme-miR-282-5p X - 13860269 13860295 3'utr mamo FlyBase G50746.1 TTGTAAGTTCCCTATTGAGGCTCATTC 5 13860281 0.711883834 3 5 39 1 1.079181246 0 1 1 5 0 0 12 X:13860269-13860295 6 5.5 3886 FBgn0267033 6198.503333 82.32 126.9666667 0.000887311 0.066812439 0.043318456 1 2 1.5 0.15 dme-miR-1008-3p 7mer-A1 GCTGTGA X 13866926 13866932 - X_13866926_13866932_- 0.819377827 0.818868686 0.819123256 0.000359988 mamo FBtr0346003|FBtr0346006 13858015|13865860 13869553|13869553 X - 13866900 13866957 5'utr mamo FlyBase G67404.1 AAAAACTTTTGGATTAAACAATTTGGCTGTGATAGCATTACAAGAATAGTAAATAATT 71 13866934 0.985963621 9 68 568 0.964285714 1.908485019 0.071428571 0.154929577 0.285714286 71 3 0 81 X:13866900-13866957 7 mamo FBtr0346003|FBtr0346006 13858015|13865860 13869553|13869553 GCTGTGA 7mer-A1 dme-miR-1008-3p X - 13866900 13866949 5'utr mamo FlyBase G50747.1 TTGGATTAAACAATTTGGCTGTGATAGCATTACAAGAATAGTAAATAATT 38 13866934 0.869907644 8 35 255 0.9 1.176091259 0.18 0.263157895 0.44 38 3 2 45 X:13866900-13866949 7 53 3887 FBgn0267033 6198.503333 82.32 126.9666667 0.008550451 0.64382896 0.417432397 2 2 2 0.15 dme-bantam-3p 7mer-A1 GATCTCA X 13867332 13867338 - X_13867332_13867338_- 0.821582044 0.822308381 0.821945212 0.000513642 mamo FBtr0346003|FBtr0346006 13858015|13865860 13869553|13869553 X - 13867313 13867352 5'utr mamo FlyBase G67405.1 AAGAAATGCAAATCGATCTCAAAATTATAAACAAATGAAA 47 13867340 0.841370012 4 46 221 0.964285714 1.73239376 0.142857143 0.14893617 0.285714286 47 2 0 54 X:13867313-13867352 7 mamo FBtr0346003|FBtr0346006 13858015|13865860 13869553|13869553 GATCTCA 7mer-A1 dme-bantam-3p X - 13867320 13867393 5'utr mamo FlyBase G50748.1 ACTTAGGTGATTAGCCCGGCAACAACAGCAAACGAAACAACAAGAAATGCAAATCGATCTCAAAATTATAAACA 22 13867345 0.961314377 4 22 109 1 1.491361694 0.161290323 0.272727273 0.483870968 22 0 0 31 X:13867320-13867393 7 33.5 3888 FBgn0267033 6198.503333 82.32 126.9666667 0.00540453 0.406948494 0.263848779 2 7 4.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-m8 CTGTGAT X 13867828 13867834 - X_13867828_13867834_- 0.618306972 0.544448849 0.58137791 0.052225634 mamo FBtr0346003|FBtr0346003|FBtr0346003|FBtr0346006|FBtr0346006|FBtr0346006 13858015|13858015|13858015|13865860|13865860|13865860 13869553|13869553|13869553|13869553|13869553|13869553 X - 13867806 13867864 5'utr mamo FlyBase G67406.1 AAGCAGCAGCAGCAGAATTACATAGAATATCTGTGATCTTAACGATATTTATAAAAAAC 126 13867835 0.987236358 7 118 1070 0.937062937 2.127104798 0.111888112 0.119047619 0.223776224 126 9 0 134 X:13867806-13867864 7 mamo FBtr0346003|FBtr0346003|FBtr0346003|FBtr0346006|FBtr0346006|FBtr0346006 13858015|13858015|13858015|13865860|13865860|13865860 13869553|13869553|13869553|13869553|13869553|13869553 CTGTGAT 7mer-m8 "dme-miR-2a-3p,dme-miR-2b-3p" X - 13867808 13867858 5'utr mamo FlyBase G50749.1 CAGCAGCAGAATTACATAGAATATCTGTGATCTTAACGATATTTATAAAAA 88 13867835 0.738477231 5 84 749 0.971223022 1.829303773 0.115107914 0.420454545 0.633093525 88 3 1 135 X:13867808-13867858 7 105.5 3889 FBgn0267033 6198.503333 82.32 126.9666667 0.017020238 1.281584062 0.830926752 1 1 1 0.15 dme-miR-1006-3p 6mer3-8 CGAATT X 13868995 13869000 - X_13868995_13869000_- 0.471836835 0.345524219 0.408680527 0.089316496 mamo FBtr0346003|FBtr0346006 13858015|13865860 13869553|13869553 X - 13868980 13869021 5'utr mamo FlyBase G67409.1 AATTATATAGCAGCATATTGTCGAATTGTTGAAGTTTATACC 5 13869004 0.664792619 3 5 48 1 0.698970004 0 0 0 5 0 0 5 X:13868980-13869021 6 mamo FBtr0346003|FBtr0346006 13858015|13865860 13869553|13869553 CGAATT 6mer3-8 dme-miR-1006-3p X - 13868986 13869015 5'utr mamo FlyBase G50753.1 ATAGCAGCATATTGTCGAATTGTTGAAGTT 6 13869004 0.71266717 2 5 36 0.666666667 0.77815125 0 0.333333333 0.555555556 6 3 0 6 X:13868986-13869015 6 5.5 3890 FBgn0267033 6198.503333 82.32 126.9666667 0.000887311 0.066812439 0.043318456 4 4 4 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA X 1392563 1392570 + X_1392563_1392570_+ 0.499278101 0.499738996 0.499508548 0.000325906 CG32813 FBtr0330319|FBtr0070222|FBtr0342737|FBtr0342736|FBtr0070219|FBtr0330317|FBtr0330320|FBtr0342735 1391564|1391564|1391564|1391564|1391564|1391564|1391564|1391564 1392843|1392843|1392843|1392843|1392843|1392843|1392843|1392843 X + 1392537 1392581 3'utr CG32813 FlyBase G57945.1 CATTGAAGGAACTGTAGCTAATTTATGTACTTAATGAACCAGTGA 26 1392562 0.752432733 2 26 255 1 1.462397998 0.172413793 0.115384615 0.206896552 26 0 0 29 X:1392537-1392581 8 CG32813 FBtr0342737|FBtr0330319|FBtr0342736|FBtr0330320|FBtr0070222|FBtr0330317|FBtr0070219|FBtr0342735 1391564|1391564|1391564|1391564|1391564|1391564|1391564|1391564 1392843|1392843|1392843|1392843|1392843|1392843|1392843|1392843 GTACTTAA 8mer-A1 dme-miR-252-5p X + 1392540 1392583 3'utr CG32813 FlyBase G43842.1 TGAAGGAACTGTAGCTAATTTATGTACTTAATGAACCAGTGAAA 22 1392562 0.72588109 3 22 203 1 1.568201724 0.108108108 0.363636364 0.621621622 22 0 0 37 X:1392540-1392583 8 24 3891 FBgn0052813 73.22 2.636666667 4.1 0.327779295 9.102402023 5.853658537 1 1 1 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC X 1392625 1392630 + X_1392625_1392630_+ 0.998495185 0.998553349 0.998524267 4.11E-05 CG32813 FBtr0330319|FBtr0070222|FBtr0342737|FBtr0342736|FBtr0070219|FBtr0330317|FBtr0330320|FBtr0342735 1391564|1391564|1391564|1391564|1391564|1391564|1391564|1391564 1392843|1392843|1392843|1392843|1392843|1392843|1392843|1392843 X + 1392604 1392667 3'utr CG32813 FlyBase G57946.1 GGTGTAAAGAGAAGAAACTTGCTAGTCGCCGCTGCATAACTGTGTAAATGTGGCACACAAACCA 22 1392623 0.946083067 3 21 90 0.962962963 1.414973348 0.444444444 0.227272727 0.37037037 22 1 0 26 X:1392604-1392667 6 CG32813 FBtr0342737|FBtr0330319|FBtr0342736|FBtr0330320|FBtr0070222|FBtr0330317|FBtr0070219|FBtr0342735 1391564|1391564|1391564|1391564|1391564|1391564|1391564|1391564 1392843|1392843|1392843|1392843|1392843|1392843|1392843|1392843 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" X + 1392603 1392640 3'utr CG32813 FlyBase G43843.1 TGGTGTAAAGAGAAGAAACTTGCTAGTCGCCGCTGCAT 11 1392623 0.937397908 2 11 45 1 1.176091259 0.6 0.181818182 0.4 11 0 0 15 X:1392603-1392640 6 16 3892 FBgn0052813 73.22 2.636666667 4.1 0.21851953 6.068268015 3.902439024 2 2 2 0.15 dme-miR-34-5p 7mer-m8 CACTGCC X 1395468 1395474 + X_1395468_1395474_+ 0.708780639 0.708925855 0.708853247 0.000102743 CG11448 FBtr0332291|FBtr0070225 1395374|1395374 1397337|1397337 X + 1395397 1395496 3'utr CG11448 FlyBase G57951.1 TTGGCGTGCATTTCACTTTTCGTTTGTTTTCTGTTTTTCCGTTTCCGTTCCATTCCGTTCCGTTCCGTTTGCACTGCCCCCCGCACCCCTGCATCTTGCA 192 1395450 0.99058932 17 185 1899 0.948497854 1.566241023 0.201716738 0.1875 0.330472103 192 7 5 221 X:1395397-1395496 7 CG11448 FBtr0070225|FBtr0332291 1395374|1395374 1397337|1397337 CACTGCC 7mer-m8 dme-miR-34-5p X + 1395394 1395494 3'utr CG11448 FlyBase G43848.1 GAGTTGGCGTGCATTTCACTTTTCGTTTGTTTTCTGTTTTTCCGTTTCCGTTCCATTCCGTTCCGTTCCGTTTGCACTGCCCCCCGCACCCCTGCATCTTG 142 1395450 0.990163311 15 133 1333 0.936651584 1.713910354 0.199095023 0.401408451 0.615384615 142 11 3 207 X:1395394-1395494 7 46 3893 FBgn0024985 122.6666667 3.986666667 6.07 0.375 11.53846154 7.578253707 18 18 18 0.15 dme-miR-305-3p 6mer2-7 TGTGCC X 1395641 1395646 + X_1395641_1395646_+ 0.822929957 0.822105479 0.822517718 0.00058301 CG11448 FBtr0332291|FBtr0070225 1395374|1395374 1397337|1397337 X + 1395526 1395665 3'utr CG11448 FlyBase G57952.1 ACGTCTTACGATTACGTTTACATTTAGTTTAGGCAACAGCCTGTATCTGACCCTGTCCCTCGCCATTCACCTGCTCCGCCTGAGCTGTACATACATAGTTTACACACTCGATTGCTGTGCCCTCATAATTCTAAGTTGTT 1174 1395637 0.923214846 21 1166 9428 0.993621545 2.845718018 0.029057406 0.160988075 0.301913536 1174 8 1 1402 X:1395526-1395665 6 CG11448 FBtr0070225|FBtr0332291 1395374|1395374 1397337|1397337 TGTGCC 6mer2-7 dme-miR-305-3p X + 1395526 1395664 3'utr CG11448 FlyBase G43849.1 ACGTCTTACGATTACGTTTACATTTAGTTTAGGCAACAGCCTGTATCTGACCCTGTCCCTCGCCATTCACCTGCTCCGCCTGAGCTGTACATACATAGTTTACACACTCGATTGCTGTGCCCTCATAATTCTAAGTTGT 807 1395637 0.90858251 22 799 6322 0.990909091 2.514547753 0.028030303 0.416356877 0.643181818 807 9 3 1308 X:1395526-1395664 6 945 3894 FBgn0024985 122.6666667 3.986666667 6.07 7.703804348 237.0401338 155.6836903 4 4 4 0.15 dme-miR-986-5p 6mer2-7 TTCGAG X 1396553 1396558 + X_1396553_1396558_+ 0.860231137 0.876284344 0.868257741 0.011351327 CG11448 FBtr0332292|FBtr0332291|FBtr0070225 1395684|1395374|1395374 1397337|1397337|1397337 X + 1396529 1396594 3'utr CG11448 FlyBase G57958.1 CCACTCCACTTGAAGCCCAGTGATTTCGAGGAGATCTCAGTCCGATCCTCGTTCATAGCTAGTATC 47 1396553 0.692836088 6 45 251 0.982142857 1.439332694 0.160714286 0.14893617 0.285714286 47 0 1 55 X:1396529-1396594 6 CG11448 FBtr0070225|FBtr0332291|FBtr0332292 1395374|1395374|1395684 1397337|1397337|1397337 TTCGAG 6mer2-7 dme-miR-986-5p X + 1396536 1396580 3'utr CG11448 FlyBase G43852.1 ACTTGAAGCCCAGTGATTTCGAGGAGATCTCAGTCCGATCCTCGT 36 1396552 0.68024546 6 36 195 1 1.707570176 0.058823529 0.25 0.470588235 36 0 0 51 X:1396536-1396580 6 39 3895 FBgn0024985 122.6666667 3.986666667 6.07 0.317934783 9.782608696 6.425041186 0 1 0.5 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 1396725 1396731 + X_1396725_1396731_+ 0.698623214 0.753783063 0.726203139 0.039003939 CG11448 FBtr0332292|FBtr0332291|FBtr0070225 1395684|1395374|1395374 1397337|1397337|1397337 X + 1396668 1396743 3'utr CG11448 FlyBase G57959.1 AAAGCGAGGAAACTCCGTTTACATATCAGCTCCATCGCTATCGTCGATGCGAACGTGCCAAAGACTAATGGTCAGA 13 1396723 0.9652599 5 12 66 1 1.113943352 0 0 0 13 0 0 13 X:1396668-1396743 7 CG11448 FBtr0070225|FBtr0332291|FBtr0332292 1395374|1395374|1395684 1397337|1397337|1397337 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X + 1396678 1396746 3'utr CG11448 FlyBase G43853.1 AACTCCGTTTACATATCAGCTCCATCGCTATCGTCGATGCGAACGTGCCAAAGACTAATGGTCAGACCC 11 1396723 0.940431637 4 10 45 0.933333333 0.84509804 0.2 0.272727273 0.466666667 11 0 1 14 X:1396678-1396746 7 7.5 3896 FBgn0024985 122.6666667 3.986666667 6.07 0.061141304 1.881270903 1.235584843 2 2 2 0.15 dme-miR-8-3p 6mer2-7 AGTATT X 1396976 1396981 + X_1396976_1396981_+ 0.999607058 0.9915533 0.995580179 0.005694897 CG11448 FBtr0332292|FBtr0332291|FBtr0070225 1395684|1395374|1395374 1397337|1397337|1397337 X + 1396953 1397059 3'utr CG11448 FlyBase G57961.1 GAAAAGAAGATGGAGAGAAATTGAGTATTTGGTGAATTAATGTTAACTAAATTTATATACACATATACACATGCATTATACATAATATACTTTACTATATACTATGT 41 1396974 0.982932592 17 40 307 0.98 1.69019608 0.18 0.170731707 0.32 41 1 0 49 X:1396953-1397059 6 CG11448 FBtr0070225|FBtr0332291|FBtr0332292 1395374|1395374|1395684 1397337|1397337|1397337 AGTATT 6mer2-7 dme-miR-8-3p X + 1396956 1397012 3'utr CG11448 FlyBase G43855.1 AAGAAGATGGAGAGAAATTGAGTATTTGGTGAATTAATGTTAACTAAATTTATATAC 31 1396974 0.7763504 10 28 264 0.905660377 1.681241237 0.113207547 0.548387097 0.735849057 31 5 0 48 X:1396956-1397012 6 29.5 3897 FBgn0024985 122.6666667 3.986666667 6.07 0.24048913 7.399665552 4.859967051 2 2 2 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 13999271 13999276 + X_13999271_13999276_+ 0.730949267 0.730949327 0.730949297 0 ben FBtr0307296|FBtr0307296|FBtr0307296|FBtr0332844|FBtr0332844|FBtr0332844|FBtr0073855|FBtr0073855|FBtr0073855|FBtr0332843|FBtr0332843|FBtr0332843 13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615 13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805 X + 13999254 13999295 3'utr ben FlyBase G61311.1 TTTCAGAAAATTTAAGATGTGATCGTCCAACTTGTAGACTTT 10 13999266 0.888634882 5 8 77 0.916666667 1.041392685 0 0.2 0.333333333 10 1 0 11 X:13999254-13999295 6 ben FBtr0332843|FBtr0332843|FBtr0332843|FBtr0332844|FBtr0332844|FBtr0332844|FBtr0073855|FBtr0073855|FBtr0073855|FBtr0307296|FBtr0307296|FBtr0307296 13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615 13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X + 13999257 13999298 3'utr ben FlyBase G46304.1 CAGAAAATTTAAGATGTGATCGTCCAACTTGTAGACTTTACT 9 13999267 0.850713566 5 9 61 1 1.230448921 0.176470588 0.666666667 0.823529412 9 0 0 17 X:13999257-13999298 6 8.5 3898 FBgn0000173 1034.81 74.77333333 113.92 0.008214068 0.11367689 0.074613764 5 4 4.5 0.15 dme-miR-14-3p 6mer3-8 AAGACT X 14204745 14204750 - X_14204745_14204750_- 0.896531776 0.848762133 0.872646954 0.033778279 l(1)G0469 FBtr0333428|FBtr0333429 14203959|14203959 14205285|14206316 X - 14204705 14204776 3'utr l(1)G0469 FlyBase G67423.1 CACACACACACACTGTGAAATTCGAAAAGACTTATTAAATATTTGTTTGTTTTTTTTTTTTCGTCCTAACTT 15 14204742 0.985111958 5 13 115 0.833333333 0.698970004 0.222222222 0.2 0.333333333 15 1 2 15 X:14204705-14204776 6 l(1)G0469 FBtr0333429|FBtr0333428 14203959|14203959 14206316|14205285 AAGACT 6mer3-8 dme-miR-14-3p X - 14204735 14204773 3'utr l(1)G0469 FlyBase G50762.1 ACACACACACTGTGAAATTCGAAAAGACTTATTAAATAT 13 14204742 0.767437366 3 12 61 0.923076923 1.079181246 0.615384615 0 0 13 1 0 12 X:14204735-14204773 6 11.5 3899 FBgn0040153 149.5566667 5.536666667 8.426666667 0.076893931 2.077062011 1.36471519 -8 -8 -8 0.15 dme-miR-1006-3p 7mer-A1 GAATTTA X 14232321 14232327 - X_14232321_14232327_- 0.749737562 0.82206724 0.785902401 0.051144751 CG42271 FBtr0299614 14232280 14232720 X - 14232315 14232386 3'utr CG42271 FlyBase G67433.1 TGTAAACTTATGTGTAATCCCATCGGGAGCTGGTGTTGCATTGCGTTCCATGTGATTATGAATTTATTCTTG 8 14232330 0.99184049 5 7 72 0.888888889 0.903089987 0.333333333 0.125 0.222222222 8 1 0 8 X:14232315-14232386 7 CG42271 FBtr0299614 14232280 14232720 GAATTTA 7mer-A1 dme-miR-1006-3p X - 14232311 14232356 3'utr CG42271 FlyBase G50767.1 TGGTGTTGCATTGCGTTCCATGTGATTATGAATTTATTCTTGGAAT 6 14232328 0.983788489 4 5 41 0.9 0.954242509 0.4 0.5 0.7 6 1 0 9 X:14232311-14232356 7 3 3900 FBgn0259166 258.3166667 15.79666667 24.03666667 0.011613652 0.189913484 0.124809319 3 1 2 0.15 dme-miR-92b-3p 6mer2-7 TGCAAT X 14240016 14240021 + X_14240016_14240021_+ 0.631807286 0.94259468 0.787200983 0.219759878 CG1434 FBtr0073903|FBtr0339437 14239922|14239922 14240152|14240152 X + 14240008 14240100 3'utr CG1434 FlyBase G61334.1 TTGATTATTGCAATGGCTGTTGCAACTGCCTTAGGTGCTGGGAGCAGTATCTGGACTACCTCCATTGGGTTAACAAAGTTTGCATCTGAATAA 17 14240021 0.984598791 10 15 117 0.894736842 1.230448921 0.368421053 0.117647059 0.210526316 17 2 0 17 X:14240008-14240100 6 CG1434 FBtr0073903|FBtr0339437 14239922|14239922 14240152|14240152 TGCAAT 6mer2-7 dme-miR-92b-3p X + 14240010 14240070 3'utr CG1434 FlyBase G46320.1 GATTATTGCAATGGCTGTTGCAACTGCCTTAGGTGCTGGGAGCAGTATCTGGACTACCTCC 10 14240021 0.81496564 3 9 56 1 1.301029996 0.25 0.6 0.8 10 0 0 20 X:14240010-14240070 6 7.5 3901 FBgn0030554 88.66666667 6.353333333 9.766666667 0.084586466 1.180482686 0.767918089 -5 -5 -5 0.15 dme-miR-1012-3p 6mer3-8 TTGACT X 14258453 14258458 + X_14258453_14258458_+ 0.999999968 0.999999773 0.99999987 1.41E-07 mud FBtr0332622|FBtr0308325|FBtr0308329|FBtr0308327|FBtr0308328 14258229|14258229|14258383|14258229|14256264 14258595|14258595|14258595|14258595|14258595 X + 14258367 14258474 stop_codon mud FlyBase G61371.1 ATGTTCAAGCGCAAGTAGGCGTGGTCGCAGTCGCAGTATTATACATATATTCCCCCATTCGTGTACATCAATCGGAACTTGAATTCTTGACTTATTATTTATGTAACC 48 14258453 0.985231866 14 47 391 0.980769231 1.707570176 0.057692308 0.083333333 0.153846154 48 1 0 51 X:14258367-14258474 6 mud FBtr0308327|FBtr0308325|FBtr0308329|FBtr0308328|FBtr0332622 14258229|14258229|14258383|14256264|14258229 14258595|14258595|14258595|14258595|14258595 TTGACT 6mer3-8 dme-miR-1012-3p X + 14258374 14258474 stop_codon mud FlyBase G46345.1 AGCGCAAGTAGGCGTGGTCGCAGTCGCAGTATTATACATATATTCCCCCATTCGTGTACATCAATCGGAACTTGAATTCTTGACTTATTATTTATGTAACC 36 14258453 0.86437693 11 32 294 0.919354839 1.45484486 0.032258065 0.472222222 0.693548387 36 4 1 57 X:14258374-14258474 6 20 3902 FBgn0002873 2508.803333 43.92333333 67.46333333 0.007971928 0.455338848 0.296457335 0 0 0 0.15 dme-miR-33-5p 7mer-A1 AATGCAA X 14258564 14258570 + X_14258564_14258570_+ 0.780806586 0.776964039 0.778885312 0.002717129 mud FBtr0332622|FBtr0308325|FBtr0308329|FBtr0308327|FBtr0308328 14258229|14258229|14258383|14258229|14256264 14258595|14258595|14258595|14258595|14258595 X + 14258486 14258576 3'utr mud FlyBase G61372.1 TTTTGTACATCAGGACTTAGAGAGTTTAGTTTAAGTATGCATATGTTGCAGTGGTACAATATCGTGGGCGAACATAATAATGCAAATAAAA 13 14258563 0.963740803 7 12 66 0.923076923 1.079181246 0.230769231 0 0 13 1 0 12 X:14258486-14258576 7 mud FBtr0308327|FBtr0308325|FBtr0308329|FBtr0308328|FBtr0332622 14258229|14258229|14258383|14256264|14258229 14258595|14258595|14258595|14258595|14258595 AATGCAA 7mer-A1 dme-miR-33-5p X + 14258531 14258582 3'utr mud FlyBase G46346.2 TTGCAGTGGTACAATATCGTGGGCGAACATAATAATGCAAATAAAATTGTCT 10 14258563 0.970490291 5 9 43 0.823529412 1.146128036 0.176470588 0.5 0.705882353 10 3 0 14 X:14258531-14258582 7 8 3903 FBgn0002873 2508.803333 43.92333333 67.46333333 0.003188771 0.182135539 0.118582934 1 1 1 0.15 dme-miR-184-3p 8mer-A1 TCCGTCCA X 1455334 1455341 - X_1455334_1455341_- 0.398702454 0.412993177 0.405847816 0.010105051 CG14785 FBtr0070231 1455213 1455406 X - 1455313 1455369 3'utr CG14785 FlyBase G64003.1 ACTTCTGGGCAGTCGTGATTCTGTCAGTTCCGTCCATTGTCCTTTGCCGTGTCCATG 71 1455342 0.842382144 6 69 661 0.978947368 1.968482949 0.136842105 0.211267606 0.410526316 71 2 0 93 X:1455313-1455369 8 CG14785 FBtr0070231 1455213 1455406 TCCGTCCA 8mer-A1 dme-miR-184-3p X - 1455322 1455365 3'utr CG14785 FlyBase G48245.1 CTGGGCAGTCGTGATTCTGTCAGTTCCGTCCATTGTCCTTTGCC 34 1455342 0.818402752 4 33 305 0.958333333 1.662757832 0.1875 0.352941176 0.541666667 34 2 0 46 X:1455322-1455365 8 51 3904 FBgn0027795 22.33333333 1.63 2.503333333 2.28358209 31.28834356 20.37283622 1 1 1 0.15 dme-miR-282-5p 7mer-m8 AGAGGCT X 1478389 1478395 + X_1478389_1478395_+ 0.418697192 0.563659127 0.491178159 0.102503543 mei-38 FBtr0070258|FBtr0339588 1478255|1478255 1478482|1478482 X + 1478323 1478409 3'utr mei-38 FlyBase G57976.1 TGTGATGTGTGCTGCTGGTTTAGGTGGTTTCTTAGCAACTGACCGTGTGTTTAGTCATTAACTTGAAGAGGCTTAGTTGTTCCTACA 21 1478397 0.704970433 11 21 175 1 1.447158031 0.178571429 0.285714286 0.464285714 21 0 0 28 X:1478323-1478409 7 mei-38 FBtr0070258|FBtr0339588 1478255|1478255 1478482|1478482 AGAGGCT 7mer-m8 dme-miR-282-5p X + 1478328 1478405 3'utr mei-38 FlyBase G43863.1 TGTGTGCTGCTGGTTTAGGTGGTTTCTTAGCAACTGACCGTGTGTTTAGTCATTAACTTGAAGAGGCTTAGTTGTTCC 13 1478396 0.9491711 7 11 100 0.888888889 1.204119983 0.333333333 0.307692308 0.5 13 2 0 16 X:1478328-1478405 7 10.5 3905 FBgn0260986 265.3966667 24.39333333 37.29666667 0.039563421 0.430445477 0.281526499 -8 -7 -7.5 0.15 dme-bantam-3p 6mer3-8 TGATCT X 14788749 14788754 - X_14788749_14788754_- 0.998461309 0.998104438 0.998282874 0.000252366 rut FBtr0340467|FBtr0333656|FBtr0333655|FBtr0333654|FBtr0305581|FBtr0073992|FBtr0333657 14787476|14787476|14787476|14787476|14787476|14787476|14787476 14789669|14790548|14789669|14789669|14789669|14789669|14790548 X - 14788742 14788780 3'utr rut FlyBase G67465.1 CGCCCGTGCCCCACGCCAAGCGTCTTTGATCTTAAATGT 5 14788754 0.975080645 2 4 30 1 0.698970004 0.2 0 0 5 0 0 5 X:14788742-14788780 6 rut FBtr0073992|FBtr0333657|FBtr0333654|FBtr0305581|FBtr0333655|FBtr0340467|FBtr0333656 14787476|14787476|14787476|14787476|14787476|14787476|14787476 14789669|14790548|14789669|14789669|14789669|14789669|14790548 TGATCT 6mer3-8 dme-bantam-3p X - 14788739 14788767 3'utr rut FlyBase G50788.1 CGCCAAGCGTCTTTGATCTTAAATGTATG 8 14788754 0.695109832 2 8 61 1 1 0.1 0.25 0.4 8 0 0 10 X:14788739-14788767 6 6 3906 FBgn0003301 229.9033333 3.326666667 5.11 0.026097925 1.803607214 1.174168297 0 0 0 0.15 dme-miR-14-3p 6mer2-7 AGACTG X 14788934 14788939 - X_14788934_14788939_- 0.993719585 0.99934484 0.996532213 0.003977617 rut FBtr0340467|FBtr0333656|FBtr0333655|FBtr0333654|FBtr0305581|FBtr0073992|FBtr0333657 14787476|14787476|14787476|14787476|14787476|14787476|14787476 14789669|14790548|14789669|14789669|14789669|14789669|14790548 X - 14788922 14788961 3'utr rut FlyBase G67466.1 TTTAAGGCTATAAATTGCCCATAGACTGCTCCACCACCAT 24 14788940 0.847247003 4 23 114 0.964285714 1.431363764 0 0.125 0.25 24 1 0 27 X:14788922-14788961 6 rut FBtr0073992|FBtr0333657|FBtr0333654|FBtr0305581|FBtr0333655|FBtr0340467|FBtr0333656 14787476|14787476|14787476|14787476|14787476|14787476|14787476 14789669|14790548|14789669|14789669|14789669|14789669|14790548 AGACTG 6mer2-7 dme-miR-14-3p X - 14788924 14788951 3'utr rut FlyBase G50789.1 TAAATTGCCCATAGACTGCTCCACCACC 12 14788940 0.786874972 4 11 49 0.9375 1.176091259 0 0.25 0.4375 12 1 0 15 X:14788924-14788951 6 18 3907 FBgn0003301 229.9033333 3.326666667 5.11 0.078293776 5.410821643 3.522504892 1 1 1 0.15 dme-miR-282-5p 6mer2-7 GAGGCT X 1480438 1480443 + X_1480438_1480443_+ 0.999818479 0.999878372 0.999848425 4.24E-05 rush FBtr0339589 1480188 1481420 X + 1480421 1480466 5'utr rush FlyBase G57986.1 AAGGACGTGCAAAATTTGAGGCTTATCGAGTTCTAAGTTGGGAGAG 31 1480437 0.761585231 4 30 208 0.972222222 1.544068044 0.027777778 0.161290323 0.277777778 31 1 0 35 X:1480421-1480466 6 rush FBtr0339589 1480188 1481420 GAGGCT 6mer2-7 dme-miR-282-5p X + 1480360 1480457 5'utr rush FlyBase G43870.1 TCTTCATTGCAAGACCTTCGGACCCAATTTCGGATCTTTCATTATACCTATGCGTTAGATAAAGGACGTGCAAAATTTGAGGCTTATCGAGTTCTAAG 21 1480437 0.979291784 8 20 140 1 1.505149978 0.125 0.428571429 0.625 21 0 0 32 X:1480360-1480457 6 22 3908 FBgn0025381 3553.903333 199.46 304.35 0.006190377 0.110297804 0.072285198 1 1 1 0.15 dme-miR-305-5p 7mer-A1 GTACAAA X 1481381 1481387 + X_1481381_1481387_+ 0.782721664 0.782829114 0.782775389 7.59E-05 rush FBtr0070259|FBtr0339589 1480188|1480188 1481420|1481420 X + 1481262 1481420 3'utr rush FlyBase G57989.1 GTTCCCGTTTTTGGCGGATAAGAACCACTAAAATCGTATGTTTGGCGAGAGGATAAACTATATGGATATGTATACAACATAAGCAATTTGCAATTGCGATCATTAACTGTTTTCTATTTGTACAAAGCCCAAAAAACAATAAATTAATACTGTAAATTG 95 1481379 0.986358411 23 87 743 0.930434783 1.427323786 0.086956522 0.168421053 0.313043478 95 5 3 107 X:1481262-1481420 7 rush FBtr0070259|FBtr0339589 1480188|1480188 1481420|1481420 GTACAAA 7mer-A1 dme-miR-305-5p X + 1481018 1481399 3'utr rush FlyBase G43871.1 AACGGAAGCGATGCGAGCAGGAGGAGATTAAGGAGCTGCGCAAGATGACGGCATTCAAGGCTCGTCCGAATCCATTTAAATAGTGCTCGACGGAACCAATCGACTACCAAACGTTTGATAGCCCTGTCCAAATTTAAATGAAGTGAAGTCGATGCTACACATAATCGTGTTTACCGATGCATAGTTTTACCAGATTAACACAATTTTTGTCTCTTAACATTAACATTACTTTTACGCATATATCGTTCCCGTTTTTGGCGGATAAGAACCACTAAAATCGTATGTTTGGCGAGAGGATAAACTATATGGATATGTATACAACATAAGCAATTTGCAATTGCGATCATTAACTGTTTTCTATTTGTACAAAGCCCAAAAAACA 146 1481378 0.991576417 53 137 1106 0.948356808 2.305351369 0.079812207 0.363013699 0.563380282 146 11 0 202 X:1481018-1481399 7 31.5 3909 FBgn0025381 3553.903333 199.46 304.35 0.008863494 0.157926401 0.103499261 2 3 2.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA X 14827158 14827164 - X_14827158_14827164_- 0.821215653 0.819591468 0.82040356 0.001148483 CG14408 FBtr0073990|FBtr0339446|FBtr0305580|FBtr0340466 14827056|14827056|14827056|14826865 14827787|14827787|14827787|14827787 X - 14827148 14827183 3'utr CG14408 FlyBase G67476.1 AAAAGCAAATAACTAAATGCTAGTCAACAAAAACGA 41 14827166 0.734298194 3 40 160 0.978723404 1.662757832 0 0.12195122 0.234042553 41 1 0 46 X:14827148-14827183 7 CG14408 FBtr0340466|FBtr0305580|FBtr0339446|FBtr0073990 14826865|14827056|14827056|14827056 14827787|14827787|14827787|14827787 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X - 14827148 14827184 3'utr CG14408 FlyBase G50797.1 AAAAAGCAAATAACTAAATGCTAGTCAACAAAAACGA 29 14827166 0.747366754 2 27 114 0.952380952 1.602059991 0.047619048 0.310344828 0.523809524 29 2 0 40 X:14827148-14827184 7 35 3910 FBgn0030581 268.9266667 10.35333333 15.88666667 0.130147004 3.380553767 2.203105329 2 2 2 0.15 dme-miR-31a-5p 7mer-m8 TCTTGCC X 14851077 14851083 - X_14851077_14851083_- 0.661438107 0.659680852 0.660559479 0.001242528 CG9521 FBtr0073985 14851003 14851256 X - 14851047 14851176 3'utr CG9521 FlyBase G67488.1 ATCACACCTTAAATGCAATGGCCAGTGTAAAATGGGGCTTTAGTTTTAGTTAAGGCCTTCGAAAACTTTTTGTTATTATGTGTAGTAATTCTTTCTTGCCTGAACTGATTCTAGTTTAAGATTTAGTTAT 85 14851081 0.898483573 19 72 801 0.848484848 1.62324929 0.090909091 0.141176471 0.262626263 85 14 1 84 X:14851047-14851176 7 CG9521 FBtr0073985 14851003 14851256 TCTTGCC 7mer-m8 dme-miR-31a-5p X - 14851039 14851103 3'utr CG9521 FlyBase G50803.1 TATTATGTGTAGTAATTCTTTCTTGCCTGAACTGATTCTAGTTTAAGATTTAGTTATATAAGCAT 45 14851081 0.613340139 11 43 437 0.948275862 1.740362689 0.103448276 0.244444444 0.413793103 45 3 0 55 X:14851039-14851103 7 47 3911 FBgn0030588 765.0066667 37.97666667 54.6 0.061437373 1.237602036 0.860805861 -2 -2 -2 0.15 dme-miR-308-3p 7mer-m1 TGTGATT X 14934583 14934589 - X_14934583_14934589_- 0.521215344 0.521218323 0.521216834 2.12E-06 pdgy FBtr0303294|FBtr0343521|FBtr0073972|FBtr0308838 14933668|14934038|14934038|14934038 14934629|14934629|14934629|14934629 X - 14934576 14934612 3'utr pdgy FlyBase G67498.1 CTTCGTAGGCTAAGAAATATTTTTGTGATTTTTTTTT 21 14934591 0.701898922 5 21 265 1 1.397940009 0.12 0.142857143 0.28 21 0 0 25 X:14934576-14934612 7 pdgy FBtr0303294|FBtr0343521|FBtr0073972|FBtr0308838 14933668|14934038|14934038|14934038 14934629|14934629|14934629|14934629 TGTGATT 7mer-m1 dme-miR-308-3p X - 14934578 14934613 3'utr pdgy FlyBase G50810.1 TCTTCGTAGGCTAAGAAATATTTTTGTGATTTTTTT 10 14934591 0.677574682 6 10 121 1 1.113943352 0 0.3 0.461538462 10 0 0 13 X:14934578-14934613 7 15 3912 FBgn0027601 126.1633333 5.696666667 8.713333333 0.118893498 2.633118783 1.721499617 2 2 2 0.15 dme-miR-92b-3p 7mer-A1 TGCAATA X 15010170 15010176 - X_15010170_15010176_- 0.705263353 0.648644035 0.676953694 0.040035962 hiw FBtr0346087 15010135 15010831 X - 15010164 15010204 3'utr hiw FlyBase G67499.1 TATTTTATGAATGCGACGAACGGAAGAATGCAATAAAAATC 15 15010171 0.725687124 6 12 52 0.8125 1.113943352 0.0625 0.066666667 0.125 15 3 0 13 X:15010164-15010204 7 hiw FBtr0346087 15010135 15010831 TGCAATA 7mer-A1 dme-miR-92b-3p X - 15010164 15010203 3'utr hiw FlyBase G50812.1 ATTTTATGAATGCGACGAACGGAAGAATGCAATAAAAATC 17 15010171 0.740985298 5 17 54 1 1.361727836 0.347826087 0.294117647 0.47826087 17 0 0 23 X:15010164-15010203 7 15.5 3913 FBgn0030600 813.3333333 5.783333333 8.796666667 0.019057377 2.680115274 1.762031072 -5 -5 -5 0.15 dme-miR-932-5p 8mer-A1 GGAATTGA X 15032858 15032865 + X_15032858_15032865_+ 0.595803444 0.556683726 0.576243585 0.027661805 be FBtr0073956 15032682 15042060 X + 15032797 15032874 3'utr be FlyBase G61413.1 ATGTAGCGGATATTGATTATTCAATATTTATGATGTAAAGCGACATCGCCAAAATGGTCTCGGAATTGATAATTGTTA 168 15032851 0.94541202 6 168 708 1 2.269512944 0.064516129 0.095238095 0.182795699 168 0 0 186 X:15032797-15032874 8 be FBtr0073956 15032682 15042060 GGAATTGA 8mer-A1 dme-miR-932-5p X + 15032830 15032876 3'utr be FlyBase G46374.1 TGTAAAGCGACATCGCCAAAATGGTCTCGGAATTGATAATTGTTAAT 105 15032851 0.889864131 2 105 417 1 2.204119983 0.01875 0.371428571 0.5875 105 0 0 160 X:15032830-15032876 8 134 3914 FBgn0052594 1740.783333 62.23 95.48 0.07697684 2.153302266 1.403435274 7 7 7 0.15 dme-miR-14-3p 7mer-A1 AGACTGA X 15032899 15032905 + X_15032899_15032905_+ 0.789928971 0.812923563 0.801426267 0.016259638 be FBtr0073956 15032682 15042060 X + 15032880 15032919 3'utr be FlyBase G61414.1 ATTAAAATAACCTTTGCAGAGACTGACCCAAATCCTCAGG 15 15032893 0.65624085 5 12 74 0.842105263 0.726998728 0.157894737 0.2 0.368421053 15 1 2 16 X:15032880-15032919 7 be FBtr0073956 15032682 15042060 AGACTGA 7mer-A1 dme-miR-14-3p X + 15032883 15032915 3'utr be FlyBase G46375.1 AAAATAACCTTTGCAGAGACTGACCCAAATCCT 11 15032893 0.596280687 5 10 47 0.961538462 1.397940009 0 0.545454545 0.807692308 11 1 0 25 X:15032883-15032915 7 13 3915 FBgn0052594 1740.783333 62.23 95.48 0.007467902 0.208902459 0.136154168 6 6 6 0.15 dme-bantam-3p 6mer3-8 TGATCT X 15032981 15032986 + X_15032981_15032986_+ 0.999884325 0.999870696 0.999877511 9.62E-06 be FBtr0073956 15032682 15042060 X + 15032937 15032995 3'utr be FlyBase G61415.1 GAAATACCTATTGAAAAAAACATGAAATACGCTAAACGAAACTTTGATCTGTATATAAA 20 15032981 0.972342583 7 20 118 1 1.342422681 0.090909091 0.05 0.136363636 20 0 0 22 X:15032937-15032995 6 be FBtr0073956 15032682 15042060 TGATCT 6mer3-8 dme-bantam-3p X + 15032949 15032995 3'utr be FlyBase G46376.1 GAAAAAAACATGAAATACGCTAAACGAAACTTTGATCTGTATATAAA 16 15032989 0.878212254 5 16 90 1 1.414973348 0 0.375 0.615384615 16 0 0 26 X:15032949-15032995 6 13.5 3916 FBgn0052594 1740.783333 62.23 95.48 0.007755129 0.216937169 0.141390867 0 -8 -4 0.15 dme-miR-263a-5p 6mer2-7 TGCCAT X 15033706 15033711 + X_15033706_15033711_+ 0.999836555 0.999690771 0.999763663 0.000103096 be FBtr0073956 15032682 15042060 X + 15033684 15033726 5'utr be FlyBase G61417.1 AGCCGTCGACGACGGCCAATTATGCCATCCCCGTTTGGAGGTC 19 15033705 0.730773617 4 19 107 1 1.322219295 0.19047619 0.052631579 0.142857143 19 0 0 21 X:15033684-15033726 6 be FBtr0073956 15032682 15042060 TGCCAT 6mer2-7 dme-miR-263a-5p X + 15033691 15033727 5'utr be FlyBase G46378.1 GACGACGGCCAATTATGCCATCCCCGTTTGGAGGTCC 9 15033706 0.932382037 3 9 49 1 1.079181246 0.25 0.333333333 0.5 9 0 0 12 X:15033691-15033727 6 14 3917 FBgn0052594 1740.783333 62.23 95.48 0.008042356 0.224971879 0.146627566 1 0 0.5 0.15 dme-miR-276a-3p 6mer3-8 AGTTCC X 15033843 15033848 + X_15033843_15033848_+ 0.935940705 0.93549067 0.935715687 0.000318198 be FBtr0073956 15032682 15042060 X + 15033800 15033888 5'utr be FlyBase G61418.1 AGAGCTGTCAAGGATTTGCGGCAGGCTCTGCAGAACTCCCCACAGTTCCATCCCAACCAGCTGACCTCAACGCGCAACCAAAGACAAAT 84 15033845 0.93775947 7 81 315 0.967032967 1.944482672 0.076923077 0.071428571 0.142857143 84 3 0 88 X:15033800-15033888 6 be FBtr0073956 15032682 15042060 AGTTCC 6mer3-8 dme-miR-276a-3p X + 15033815 15033878 5'utr be FlyBase G46379.1 TTGCGGCAGGCTCTGCAGAACTCCCCACAGTTCCATCCCAACCAGCTGACCTCAACGCGCAACC 34 15033845 0.871013476 3 30 122 0.955555556 1.633468456 0.133333333 0.323529412 0.488888889 34 2 0 43 X:15033815-15033878 6 49.5 3918 FBgn0052594 1740.783333 62.23 95.48 0.028435474 0.795436285 0.51843318 -2 -2 -2 0.15 dme-miR-283-5p 7mer-m8 TGATATT X 15041738 15041744 + X_15041738_15041744_+ 0.610963495 0.610836377 0.610899936 8.99E-05 be FBtr0073957|FBtr0073956 15034089|15032682 15042060|15042060 X + 15041627 15041845 3'utr be FlyBase G61420.1 ATATATATATACCTATGAATCTGCCACAATCTGTCACACCTGCCAGCCACAAAAAAGAGTATAAGATGAGTGAATGATTAGAGAGAAACAAAAAATACCGAAAACACAATGTGATATTCTCTGGATATGCGATGAACTGAGGAGACCTACGCATATACCTAATTAGCTAGGGAGAAGCGAACTAGGAGATATAAACCATAAGCTAGATTAAGTGAATTA 581 15041743 0.948861065 38 533 2628 0.91954023 2.028028724 0.202586207 0.166953528 0.304597701 581 51 5 640 X:15041627-15041845 7 be FBtr0073957|FBtr0073956 15034089|15032682 15042060|15042060 TGATATT 7mer-m8 dme-miR-283-5p X + 15041628 15041842 3'utr be FlyBase G46381.1 TATATATATACCTATGAATCTGCCACAATCTGTCACACCTGCCAGCCACAAAAAAGAGTATAAGATGAGTGAATGATTAGAGAGAAACAAAAAATACCGAAAACACAATGTGATATTCTCTGGATATGCGATGAACTGAGGAGACCTACGCATATACCTAATTAGCTAGGGAGAAGCGAACTAGGAGATATAAACCATAAGCTAGATTAAGTGAA 367 15041743 0.955283087 36 335 1540 0.91005291 2.11058971 0.218694885 0.386920981 0.603174603 367 48 3 516 X:15041628-15041842 7 157.5 3919 FBgn0052594 1740.783333 62.23 95.48 0.09047651 2.530933633 1.649560117 -5 -5 -5 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 15051306 15051311 + X_15051306_15051311_+ 0.999996695 0.99975539 0.999876042 0.000170625 CG5541 FBtr0073959|FBtr0073958 15051108|15051108 15051842|15051842 X + 15051275 15051338 3'utr CG5541 FlyBase G61430.1 ACAGAACCACCAATGCGTGACCTTTCGCTGTACCAAAACCATAGCCTACAGTTAGTCGTAATAT 21 15051316 0.962332074 6 20 118 0.956521739 1.342422681 0.130434783 0.095238095 0.173913043 21 1 0 22 X:15051275-15051338 6 CG5541 FBtr0073959|FBtr0073958 15051108|15051108 15051842|15051842 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 15051274 15051339 3'utr CG5541 FlyBase G46391.1 TACAGAACCACCAATGCGTGACCTTTCGCTGTACCAAAACCATAGCCTACAGTTAGTCGTAATATA 19 15051304 0.964291202 8 19 99 1 1.397940009 0.2 0.263157895 0.44 19 0 0 25 X:15051274-15051339 6 15.5 3920 FBgn0030603 416.6633333 20.09 30.71333333 0.037200298 0.771528123 0.504666811 -10 2 -4 0.15 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT X 15051502 15051508 + X_15051502_15051508_+ 0.620201707 0.620203991 0.620202849 1.63E-06 CG5541 FBtr0073959|FBtr0073958 15051108|15051108 15051842|15051842 X + 15051485 15051531 3'utr CG5541 FlyBase G61432.1 AATTTAAAGCCAAAATGTGGTGCTCTTAAATGTATATGCTACATATG 42 15051501 0.845618218 7 41 330 0.960784314 1.69019608 0.176470588 0.19047619 0.333333333 42 2 0 49 X:15051485-15051531 7 CG5541 FBtr0073959|FBtr0073958 15051108|15051108 15051842|15051842 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" X + 15051485 15051522 3'utr CG5541 FlyBase G46393.1 AATTTAAAGCCAAAATGTGGTGCTCTTAAATGTATATG 11 15051501 0.78149501 4 10 73 0.941176471 1.204119983 0.235294118 0.454545455 0.647058824 11 1 0 16 X:15051485-15051522 7 26.5 3921 FBgn0030603 416.6633333 20.09 30.71333333 0.063600509 1.319064211 0.862817452 1 1 1 0.15 dme-miR-34-5p 8mer-A1 CACTGCCA X 15064479 15064486 + X_15064479_15064486_+ 0.678347579 0.678386515 0.678367047 2.75E-05 CG5548 FBtr0073960|FBtr0340425|FBtr0340424 15064402|15064402|15064402 15064548|15064548|15064926 X + 15064455 15064524 3'utr CG5548 FlyBase G61434.1 AGGCGACGCTCCTGGCCGCGGATTCACTGCCACTGCCCCATGTTGCAAGCTAGTTTCCAGCGGAAATGTC 23 15064477 0.954425967 5 23 104 1 1.491361694 0.193548387 0.217391304 0.419354839 23 0 0 31 X:15064455-15064524 8 CG5548 FBtr0340424 15064402 15064926 CACTGCCA 8mer-A1 dme-miR-34-5p X + 15064462 15064502 3'utr CG5548 FlyBase G46394.1 GCTCCTGGCCGCGGATTCACTGCCACTGCCCCATGTTGCAA 8 15064477 0.960478759 3 7 34 0.909090909 1 0.181818182 0.25 0.454545455 8 1 0 10 X:15064462-15064502 8 14 3922 FBgn0030605 769.6633333 180.22 277.04 0.018189771 0.077682832 0.050534219 2 2 2 0.15 dme-miR-79-3p 8mer-A1 TAGCTTTA X 15068873 15068880 + X_15068873_15068880_+ 0.622124328 0.624667325 0.623395826 0.001798173 dob FBtr0073961 15068864 15069091 X + 15068844 15068903 stop_codon dob FlyBase G61437.1 GGGGACATCCGGTGTTCATTAGGCGCCATTAGCTTTATCAGCGATCGTCCCATCGATCGG 37 15068872 0.984102479 2 34 270 0.931818182 1.612783857 0.25 0.162162162 0.295454545 37 3 0 41 X:15068844-15068903 8 dob FBtr0073961 15068864 15069091 TAGCTTTA 8mer-A1 dme-miR-79-3p X + 15068861 15068892 stop_codon dob FlyBase G46397.1 ATTAGGCGCCATTAGCTTTATCAGCGATCGTC 14 15068872 0.85355754 3 14 97 1 1.342422681 0.181818182 0.5 0.681818182 14 0 0 22 X:15068861-15068892 8 25 3923 FBgn0030607 31.33333333 1.986666667 2.963333333 0.79787234 12.58389262 8.436445444 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 15069031 15069036 + X_15069031_15069036_+ 0.771187777 0.808366656 0.789777216 0.026289452 dob FBtr0073961|FBtr0073961|FBtr0073961 15068864|15068864|15068864 15069091|15069091|15069091 X + 15069011 15069045 3'utr dob FlyBase G61438.1 TTTTTTTTATGTACTGACTGCTGTGAACAAAATAA 28 15069030 0.699729444 5 27 166 0.966666667 1.462397998 0.033333333 0.071428571 0.133333333 28 1 0 29 X:15069011-15069045 6 dob FBtr0073961|FBtr0073961|FBtr0073961 15068864|15068864|15068864 15069091|15069091|15069091 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X + 15069019 15069048 3'utr dob FlyBase G46398.1 ATGTACTGACTGCTGTGAACAAAATAAATT 23 15069030 0.691427492 4 22 114 0.972972973 1.556302501 0 0.47826087 0.675675676 23 1 0 36 X:15069019-15069048 6 25.5 3924 FBgn0030607 31.33333333 1.986666667 2.963333333 0.813829787 12.83557047 8.605174353 1 1 1 0.15 dme-miR-980-3p 6mer2-7 GCAGCT X 15082310 15082315 + X_15082310_15082315_+ 0.992882703 0.990373819 0.991628261 0.00177406 CG33177 FBtr0073962 15082192 15082369 X + 15082267 15082326 3'utr CG33177 FlyBase G61443.1 AGGTTTTGGGTGCTCATTTTCAGTGAAACGTATGGTTAATTTAGCAGCTTTTGTCCTATA 11 15082316 0.990071182 7 11 109 1 1.079181246 0.166666667 0.090909091 0.166666667 11 0 0 12 X:15082267-15082326 6 CG33177 FBtr0073962 15082192 15082369 GCAGCT 6mer2-7 dme-miR-980-3p X + 15082245 15082334 3'utr CG33177 FlyBase G46401.1 AGCACCAGTGATGTCAAGGTACAGGTTTTGGGTGCTCATTTTCAGTGAAACGTATGGTTAATTTAGCAGCTTTTGTCCTATAAGTAGGAA 7 15082317 0.989282418 7 7 65 1 1.146128036 0.214285714 0.571428571 0.785714286 7 0 0 14 X:15082245-15082334 6 6.5 3925 FBgn0053177 17.33333333 2.496666667 3.806666667 0.375 2.603471295 1.707530648 -6 -7 -6.5 0.15 dme-miR-2a-2-5p 7mer-m1 GATGAGG X 15088282 15088288 + X_15088282_15088288_+ 0.667593694 0.582114415 0.624854054 0.060442993 CG5599 FBtr0073964 15088247 15088629 X + 15088245 15088314 stop_codon CG5599 FlyBase G61446.1 CTAGAGAGCCTATTACTCGAAAACGCTTACTTTTACGGATGAGGCTCTTTCCCATGCATTTATCTAGACA 251 15088284 0.929656086 13 245 2070 0.975945017 2.152288344 0.024054983 0.147410359 0.264604811 251 6 1 284 X:15088245-15088314 7 CG5599 FBtr0073964 15088247 15088629 GATGAGG 7mer-m1 dme-miR-2a-2-5p X + 15088259 15088316 3'utr CG5599 FlyBase G46405.1 ACTCGAAAACGCTTACTTTTACGGATGAGGCTCTTTCCCATGCATTTATCTAGACATA 163 15088284 0.911829466 11 159 1299 0.97260274 2.328379603 0.146118721 0.282208589 0.465753425 163 6 0 213 X:15088259-15088316 7 199.5 3926 FBgn0030612 84.33666667 5.47 8.336666667 2.365519149 36.47166362 23.93042783 -2 -2 -2 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA X 15088496 15088503 + X_15088496_15088503_+ 0.622381359 0.610717548 0.616549454 0.008247623 CG5599 FBtr0073964 15088247 15088629 X + 15088477 15088509 3'utr CG5599 FlyBase G61448.1 ACTTTTATCGTTGTTAACCTGCATTTATATATC 11 15088490 0.665580778 4 11 110 1 1.041392685 0.090909091 0 0 11 0 0 11 X:15088477-15088509 8 CG5599 FBtr0073964 15088247 15088629 TGCATTTA 8mer-A1 dme-miR-277-3p X + 15088485 15088508 3'utr CG5599 FlyBase G46407.1 CGTTGTTAACCTGCATTTATATAT 8 15088489 0.667608041 4 5 79 0.727272727 0.602059991 0 0.375 0.545454545 8 2 1 8 X:15088485-15088508 8 9.5 3927 FBgn0030612 84.33666667 5.47 8.336666667 0.112643769 1.736745887 1.139544182 6 7 6.5 0.15 dme-miR-317-3p 8mer-A1 TGTGTTCA X 1515756 1515763 + X_1515756_1515763_+ 0.629481344 0.627858372 0.628669858 0.001147564 inc FBtr0339591|FBtr0070260|FBtr0339590 1515389|1515389|1515389 1517615|1517615|1517137 X + 1515734 1515805 3'utr inc FlyBase G57995.1 ACGAAGTGTGTGCGGGCGTGCATGTGTTCAACTTGTAGTAAACCAGATAGACCCGACTGTACGAGCAACAAG 45 1515756 0.944432882 8 43 296 0.965517241 1.748188027 0.172413793 0.266666667 0.431034483 45 2 0 56 X:1515734-1515805 8 inc FBtr0070260|FBtr0339590|FBtr0339591 1515389|1515389|1515389 1517615|1517137|1517615 TGTGTTCA 8mer-A1 dme-miR-317-3p X + 1515734 1515794 3'utr inc FlyBase G43877.1 ACGAAGTGTGTGCGGGCGTGCATGTGTTCAACTTGTAGTAAACCAGATAGACCCGACTGTA 21 1515756 0.980218697 4 21 146 1 1.491361694 0.322580645 0.380952381 0.580645161 21 0 0 31 X:1515734-1515794 8 30 3928 FBgn0025394 956.7333333 41.24 63.02 0.0313567 0.727449079 0.476039353 0 0 0 0.15 dme-miR-1003-3p 6mer3-8 ATGTGA X 1516418 1516423 + X_1516418_1516423_+ 0.999363973 0.996585514 0.997974744 0.001964696 inc FBtr0339591|FBtr0070260|FBtr0339590 1515389|1515389|1515389 1517615|1517615|1517137 X + 1516319 1516438 3'utr inc FlyBase G57997.1 GTTTTGTGTAGGCCCGGTTTTACTACCTTGAGCTTTATTTTAGAAAACGAGCAAGGCGAAGATCAACTTTAGGAAATCAATTGAATCACGACTGAATTTATGTGAACTTGCACTCAAAGA 22 1516416 0.983555366 11 20 159 0.884615385 1.06069784 0.115384615 0.090909091 0.230769231 22 2 1 23 X:1516319-1516438 6 inc FBtr0070260|FBtr0339590|FBtr0339591 1515389|1515389|1515389 1517615|1517137|1517615 ATGTGA 6mer3-8 dme-miR-1003-3p X + 1516388 1516476 3'utr inc FlyBase G43879.1 TAGGAAATCAATTGAATCACGACTGAATTTATGTGAACTTGCACTCAAAGAAAATACATACATGCGAATACATTATAGTGAGGATATAC 21 1516400 0.974942179 12 21 129 1 1.51851394 0.121212121 0.428571429 0.636363636 21 0 0 33 X:1516388-1516476 6 11.5 3929 FBgn0025394 956.7333333 41.24 63.02 0.012020068 0.27885548 0.182481752 2 18 10 0.15 dme-miR-1012-3p 6mer3-8 TTGACT X 1516684 1516689 + X_1516684_1516689_+ 0.784217905 0.991117498 0.887667701 0.14630011 inc FBtr0339591|FBtr0070260|FBtr0339590 1515389|1515389|1515389 1517615|1517615|1517137 X + 1516624 1516728 3'utr inc FlyBase G57999.1 AGCGAAAATTGAAGATGATCCAGAACGTCGCCACCTACTCGTACCCATTTTGTATCCATTTTGACTTATTTTACGAGCACAGCTGGTGCAGATTATATAGAGTAT 14 1516683 0.983791318 9 12 95 0.9375 0.875061263 0.125 0.071428571 0.1875 14 0 1 15 X:1516624-1516728 6 inc FBtr0070260|FBtr0339590|FBtr0339591 1515389|1515389|1515389 1517615|1517137|1517615 TTGACT 6mer3-8 dme-miR-1012-3p X + 1516671 1516765 3'utr inc FlyBase G43881.1 TTTTGTATCCATTTTGACTTATTTTACGAGCACAGCTGGTGCAGATTATATAGAGTATAACTTATGCTTACGAGGATTATTTCGACGAAGAACCT 8 1516684 0.986567326 5 7 66 1 1 0.2 0.25 0.4 8 0 0 10 X:1516671-1516765 6 3.5 3930 FBgn0025394 956.7333333 41.24 63.02 0.003658282 0.084869059 0.055537924 1 0 0.5 0.15 dme-miR-283-5p 6mer3-8 TGATAT X 15317815 15317820 + X_15317815_15317820_+ 0.448624374 0.543392628 0.496008501 0.067011237 gce FBtr0310308|FBtr0303199|FBtr0303198|FBtr0331765 15317764|15317764|15317764|15317764 15319074|15319074|15319074|15319074 X + 15317750 15317841 stop_codon gce FlyBase G61467.1 GGACGACCAGGACTAGAGTGATGGAGAGCGCCCGATCGGGTCTCGACTGAAGGGTTTCATCGATGTGATATGTAACTACTGTCCTGGCAGTC 45 15317791 0.961321726 14 38 257 0.854166667 1.311753861 0.208333333 0.066666667 0.125 45 6 1 41 X:15317750-15317841 6 gce FBtr0303198|FBtr0331765|FBtr0310308|FBtr0303199 15317764|15317764|15317764|15317764 15319074|15319074|15319074|15319074 TGATAT 6mer3-8 dme-miR-283-5p X + 15317753 15317840 stop_codon gce FlyBase G46420.1 CGACCAGGACTAGAGTGATGGAGAGCGCCCGATCGGGTCTCGACTGAAGGGTTTCATCGATGTGATATGTAACTACTGTCCTGGCAGT 27 15317792 0.975468614 10 26 163 0.96969697 1.505149978 0.303030303 0.222222222 0.363636364 27 1 0 32 X:15317753-15317840 6 15 3931 FBgn0261703 2542.05 55.46 85.10666667 0.005900749 0.2704652 0.176249413 24 23 23.5 0.15 dme-miR-970-3p 7mer-A1 CTTATGA X 15317995 15318001 + X_15317995_15318001_+ 0.821766516 0.795321139 0.808543827 0.018699722 gce FBtr0310308|FBtr0303199|FBtr0303198|FBtr0331765 15317764|15317764|15317764|15317764 15319074|15319074|15319074|15319074 X + 15317967 15318040 3'utr gce FlyBase G61469.1 GATACGGATAGATAACCTTTAACCCCAACTTATGAGTGAGCCTGAGACAAGCATACTTTAGATACCCTGCCCAC 46 15318004 0.942364034 6 43 177 0.96 1.681241237 0.1 0.086956522 0.16 46 2 0 48 X:15317967-15318040 7 gce FBtr0303198|FBtr0331765|FBtr0310308|FBtr0303199 15317764|15317764|15317764|15317764 15319074|15319074|15319074|15319074 CTTATGA 7mer-A1 dme-miR-970-3p X + 15317928 15318054 3'utr gce FlyBase G46421.1 GATGGGTAACTGCTGCGGTACAGTTTAGGTACAGATACAGATACGGATAGATAACCTTTAACCCCAACTTATGAGTGAGCCTGAGACAAGCATACTTTAGATACCCTGCCCACATGCACACACTCAC 62 15318008 0.95257434 13 61 272 0.989247312 1.963787827 0.096774194 0.35483871 0.569892473 62 1 0 92 X:15317928-15318054 7 40 3932 FBgn0261703 2542.05 55.46 85.10666667 0.015735332 0.721240534 0.469998433 -9 -13 -11 0.15 dme-miR-14-3p 7mer-m8 AAGACTG X 15318511 15318517 + X_15318511_15318517_+ 0.434571161 0.434428602 0.434499882 0.000100833 gce FBtr0310308|FBtr0303199|FBtr0303198|FBtr0331765 15317764|15317764|15317764|15317764 15319074|15319074|15319074|15319074 X + 15318367 15318565 3'utr gce FlyBase G61472.1 AACACCCACAAAGGATTAAGATAATGATATAAGTAATGATTAGCGTAAATGGGAGGATTTAAACAATTATTATGCTAAATGAAATATACTATTAAAAACCTATGTACCATACGTTGTGCGTAATGCCCAAACTAAACGTGATAAAAGACTGTTACCAACTACATACACACATACATAATACCGAGATGGAAACAACCGT 1674 15318518 0.959445607 24 1640 7977 0.981445313 2.604226053 0.010253906 0.176821983 0.327148438 1674 34 4 2010 X:15318367-15318565 7 gce FBtr0303198|FBtr0331765|FBtr0310308|FBtr0303199 15317764|15317764|15317764|15317764 15319074|15319074|15319074|15319074 AAGACTG 7mer-m8 dme-miR-14-3p X + 15318450 15318565 3'utr gce FlyBase G46424.1 ATATACTATTAAAAACCTATGTACCATACGTTGTGCGTAATGCCCAAACTAAACGTGATAAAAGACTGTTACCAACTACATACACACATACATAATACCGAGATGGAAACAACCGT 1196 15318518 0.764379484 16 1165 5648 0.974330357 2.200651554 0.0078125 0.368729097 0.578683036 1196 36 10 1746 X:15318450-15318565 7 1378.5 3933 FBgn0261703 2542.05 55.46 85.10666667 0.542278869 24.85575189 16.19732101 -7 -7 -7 0.15 dme-miR-305-5p 8mer-m1 AGTACAAT X 15318814 15318821 + X_15318814_15318821_+ 0.519128477 0.570330897 0.544729687 0.036205564 gce FBtr0310308|FBtr0303199|FBtr0303198|FBtr0331765 15317764|15317764|15317764|15317764 15319074|15319074|15319074|15319074 X + 15318743 15318858 3'utr gce FlyBase G61474.1 AAGATAAATCCGGACGAATTGATGGATTTTGGCCAAGCACGGTGCACTGCATATATGTAGCAAGTGAGCCAAGTACAATTTACACAAATGTATACATAATTAGATGCATATATGGT 36 15318821 0.843914975 12 35 204 0.952380952 1.602059991 0.214285714 0.166666667 0.285714286 36 2 0 40 X:15318743-15318858 8 gce FBtr0303198|FBtr0331765|FBtr0310308|FBtr0303199 15317764|15317764|15317764|15317764 15319074|15319074|15319074|15319074 AGTACAAT 8mer-m1 dme-miR-305-5p X + 15318791 15318857 3'utr gce FlyBase G46426.1 GCATATATGTAGCAAGTGAGCCAAGTACAATTTACACAAATGTATACATAATTAGATGCATATATGG 20 15318821 0.724906956 7 19 110 0.935483871 1.462397998 0.096774194 0.45 0.64516129 20 2 0 29 X:15318791-15318857 8 17 3934 FBgn0261703 2542.05 55.46 85.10666667 0.006687516 0.306527227 0.199749334 -7 -7 -7 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 15319063 15319068 + X_15319063_15319068_+ 0.975740164 0.992561867 0.984151016 0.011894738 gce FBtr0310308|FBtr0303199|FBtr0303198|FBtr0331765 15317764|15317764|15317764|15317764 15319074|15319074|15319074|15319074 X + 15319040 15319080 3'utr gce FlyBase G61476.1 AATGTATTAGTGAATAAACTTGTGTACCTACATACAAAACA 42 15319062 0.73288839 4 41 324 0.956521739 1.643452676 0 0.095238095 0.173913043 42 2 0 44 X:15319040-15319080 6 gce FBtr0303198|FBtr0331765|FBtr0310308|FBtr0303199 15317764|15317764|15317764|15317764 15319074|15319074|15319074|15319074 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X + 15319043 15319079 3'utr gce FlyBase G46428.1 GTATTAGTGAATAAACTTGTGTACCTACATACAAAAC 32 15319062 0.707466968 4 31 236 0.960784314 1.213074825 0 0.5 0.68627451 32 0 2 49 X:15319043-15319079 6 37 3935 FBgn0261703 2542.05 55.46 85.10666667 0.014555182 0.667147494 0.434748551 1 1 1 0.15 dme-miR-970-3p 7mer-A1 CTTATGA X 15327101 15327107 + X_15327101_15327107_+ 0.761163675 0.672823411 0.716993543 0.062466025 Top1 FBtr0100294|FBtr0340434 15325917|15325917 15328029|15328029 X + 15327063 15327124 3'utr Top1 FlyBase G61499.1 TGGATGGATCTCGATGTGGTTTCGCTTTGATTTCGTACCTTATGATCATTTTAGTTAACATT 15 15327105 0.881818272 6 15 165 1 1.230448921 0 0.133333333 0.235294118 15 0 0 17 X:15327063-15327124 7 Top1 FBtr0100294|FBtr0340434 15325917|15325917 15328029|15328029 CTTATGA 7mer-A1 dme-miR-970-3p X + 15327051 15327124 3'utr Top1 FlyBase G46446.1 ACAAAGCCACATTGGATGGATCTCGATGTGGTTTCGCTTTGATTTCGTACCTTATGATCATTTTAGTTAACATT 14 15327105 0.964706856 6 14 143 1 1.397940009 0 0.357142857 0.64 14 0 0 25 X:15327051-15327124 7 10.5 3936 FBgn0004924 1711.443333 50.77666667 78.29333333 0.006135172 0.206787895 0.134111035 -4 -4 -4 0.15 dme-miR-283-5p 6mer3-8 TGATAT X 15327694 15327699 + X_15327694_15327699_+ 0.675724643 0.720265746 0.697995194 0.031495314 Top1 FBtr0100294|FBtr0340434 15325917|15325917 15328029|15328029 X + 15327675 15327756 3'utr Top1 FlyBase G61503.1 ACATATTATAATTAGTGATTGATATAATGTGAACGCAAACATCTGTGTGCGTTTGTCGTGGATTCGCATACGGAAGCGGGAG 11 15327696 0.978648405 7 11 80 1 1.079181246 0.25 0.090909091 0.166666667 11 0 0 12 X:15327675-15327756 6 Top1 FBtr0100294|FBtr0340434 15325917|15325917 15328029|15328029 TGATAT 6mer3-8 dme-miR-283-5p X + 15327666 15327712 3'utr Top1 FlyBase G46448.1 CGCCCAAACACATATTATAATTAGTGATTGATATAATGTGAACGCAA 7 15327694 0.979946123 3 7 51 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 X:15327666-15327712 6 6.5 3937 FBgn0004924 1711.443333 50.77666667 78.29333333 0.003797964 0.128011554 0.083021117 -2 0 -1 0.15 dme-bantam-3p 6mer3-8 TGATCT X 15340206 15340211 + X_15340206_15340211_+ 0.987402966 0.95176586 0.969584413 0.025199235 HDAC6 FBtr0074008|FBtr0301774|FBtr0330405|FBtr0074010|FBtr0307383|FBtr0074009 15340014|15339631|15340167|15340014|15340014|15340014 15340360|15340360|15340360|15340360|15340360|15340360 X + 15340181 15340242 3'utr HDAC6 FlyBase G61519.1 CAATCCTCTAGCCCGCACCCACAACTGATCTGAAAACTGCTGCAACTGGCAGCCGGTCGGTC 18 15340206 0.939116067 3 15 74 0.842105263 0.903089987 0.157894737 0.055555556 0.105263158 18 2 1 16 X:15340181-15340242 6 HDAC6 FBtr0074009|FBtr0307383|FBtr0074010|FBtr0330405|FBtr0301774|FBtr0074008 15340014|15340014|15340014|15340167|15339631|15340014 15340360|15340360|15340360|15340360|15340360|15340360 TGATCT 6mer3-8 dme-bantam-3p X + 15340189 15340230 3'utr HDAC6 FlyBase G46454.1 TAGCCCGCACCCACAACTGATCTGAAAACTGCTGCAACTGGC 6 15340206 0.930712466 2 4 15 0.909090909 0.698970004 0 0.333333333 0.636363636 6 0 1 10 X:15340189-15340230 6 10 3938 FBgn0026428 186.77 5.076666667 7.796666667 0.053541789 1.969796454 1.282599401 0 0 0 0.15 dme-bantam-3p 6mer3-8 TGATCT X 15340314 15340319 + X_15340314_15340319_+ 0.976262698 0.992532744 0.984397721 0.011504627 HDAC6 FBtr0074008|FBtr0301774|FBtr0330405|FBtr0074010|FBtr0307383|FBtr0074009 15340014|15339631|15340167|15340014|15340014|15340014 15340360|15340360|15340360|15340360|15340360|15340360 X + 15340268 15340331 3'utr HDAC6 FlyBase G61520.1 CACCATACCATTTATACAAATGCAAATTGTTAAAGTTATCAACTAATGATCTAATAAATAATTC 16 15340314 0.987328366 4 14 124 0.894736842 0.753327667 0 0.125 0.263157895 16 0 2 17 X:15340268-15340331 6 HDAC6 FBtr0074009|FBtr0307383|FBtr0074010|FBtr0330405|FBtr0301774|FBtr0074008 15340014|15340014|15340014|15340167|15339631|15340014 15340360|15340360|15340360|15340360|15340360|15340360 TGATCT 6mer3-8 dme-bantam-3p X + 15340295 15340326 3'utr HDAC6 FlyBase G46455.1 TGTTAAAGTTATCAACTAATGATCTAATAAAT 5 15340314 0.786498605 2 5 37 1 0.954242509 0 0.4 0.666666667 5 0 0 9 X:15340295-15340326 6 9.5 3939 FBgn0026428 186.77 5.076666667 7.796666667 0.0508647 1.871306632 1.218469431 0 0 0 0.15 dme-bantam-3p 7mer-A1 GATCTCA X 15381124 15381130 - X_15381124_15381130_- 0.822284357 0.823337967 0.822811162 0.000745008 CG9164 FBtr0074014|FBtr0074012|FBtr0343351 15380637|15380369|15380637 15381343|15381343|15381343 X - 15381107 15381147 3'utr CG9164 FlyBase G67543.1 CGACTCGTAGGACCATAGATCTCACTGGGGGTCAGCAAACA 14 15381132 0.895301659 2 13 56 0.941176471 1.204119983 0.235294118 0.142857143 0.294117647 14 1 0 16 X:15381107-15381147 7 CG9164 FBtr0074012|FBtr0343351|FBtr0074014 15380369|15380637|15380637 15381343|15381343|15381343 GATCTCA 7mer-A1 dme-bantam-3p X - 15381107 15381153 3'utr CG9164 FlyBase G50838.1 TCATCACGACTCGTAGGACCATAGATCTCACTGGGGGTCAGCAAACA 18 15381132 0.818915307 2 18 82 1 1.431363764 0.37037037 0.444444444 0.62962963 18 0 0 27 X:15381107-15381153 7 16 3940 FBgn0030634 21.68 1.186666667 1.78 0.73800738 13.48314607 8.988764045 2 2 2 0.15 dme-miR-986-5p 8mer-A1 ATTCGAGA X 15447953 15447960 - X_15447953_15447960_- 0.623992346 0.570419518 0.597205932 0.03788169 Scamp FBtr0332592 15446177 15449232 X - 15447935 15448020 5'utr Scamp FlyBase G67560.1 CACCATGACGTTGTTGGCCAACGTGATAGGCGGTCTAATTTTGCTGTTCCACGCTGGCGAATTCGAGACCTTCTTCCTGGCCATCT 16 15447980 0.913899054 8 16 116 1 1.278753601 0.052631579 0.1875 0.315789474 16 0 0 19 X:15447935-15448020 8 Scamp FBtr0332592 15446177 15449232 ATTCGAGA 8mer-A1 dme-miR-986-5p X - 15447911 15447995 5'utr Scamp FlyBase G50852.1 ATAGGCGGTCTAATTTTGCTGTTCCACGCTGGCGAATTCGAGACCTTCTTCCTGGCCATCTTCTACACGATGCTCTTCTCGCCCG 11 15447966 0.983772138 6 10 83 1 1.278753601 0.105263158 0.545454545 0.736842105 11 0 0 19 X:15447911-15447995 8 5 3941 FBgn0040285 2407.336667 124.0333333 190.8666667 0.002076984 0.040311744 0.026196298 20 6 13 0.15 dme-miR-277-3p 6mer2-7 GCATTT X 15452575 15452580 + X_15452575_15452580_+ 0.678954166 0.727806184 0.703380175 0.03454358 Ahcy13 FBtr0346181|FBtr0332590|FBtr0074030 15452476|15452476|15452476 15453167|15452646|15452646 X + 15452541 15452637 3'utr Ahcy13 FlyBase G61539.1 GACGACGGACCCACACTAGTTATCTATTGTCTGCGCATTTCACTGTTCACCTAAGCAGCTCCAATAAAAACCCATCTCACGTACTCTCAGCGAGAGA 29 15452586 0.980257045 12 28 198 0.944444444 1.531478917 0.222222222 0.24137931 0.388888889 29 2 0 34 X:15452541-15452637 6 Ahcy13 FBtr0074030|FBtr0346181|FBtr0332590 15452476|15452476|15452476 15452646|15453167|15452646 GCATTT 6mer2-7 dme-miR-277-3p X + 15452553 15452640 3'utr Ahcy13 FlyBase G46471.1 ACACTAGTTATCTATTGTCTGCGCATTTCACTGTTCACCTAAGCAGCTCCAATAAAAACCCATCTCACGTACTCTCAGCGAGAGAAAA 13 15452571 0.969405674 9 13 87 1 1.342422681 0.227272727 0.538461538 0.727272727 13 0 0 22 X:15452553-15452640 6 11 3942 FBgn0014455 1593.303333 111.8466667 171.19 0.006903896 0.09834893 0.06425609 -11 4 -3.5 0.15 dme-miR-304-5p 6mer3-8 TGAGAT X 15455404 15455409 + X_15455404_15455409_+ 0.919366655 0.647299867 0.783333261 0.192380279 CG11655 FBtr0074031 15455302 15455551 X + 15455369 15455423 3'utr CG11655 FlyBase G61544.1 AACCTATACATCGTGCTAGCGCACGTAGACAAGGCTGAGATAGATGCTGGTTAAA 29 15455409 0.79933232 7 25 151 0.882352941 1.477121255 0.235294118 0.137931034 0.264705882 29 4 0 30 X:15455369-15455423 6 CG11655 FBtr0074031 15455302 15455551 TGAGAT 6mer3-8 dme-miR-304-5p X + 15455375 15455421 3'utr CG11655 FlyBase G46474.1 TACATCGTGCTAGCGCACGTAGACAAGGCTGAGATAGATGCTGGTTA 12 15455409 0.957516628 3 12 60 1 1.544068044 0.285714286 0.833333333 0.942857143 12 0 0 35 X:15455375-15455421 6 19 3943 FBgn0030638 234.6666667 16.39 24.77666667 0.080965909 1.159243441 0.766850531 -5 -5 -5 0.15 dme-miR-986-5p 6mer3-8 ATTCGA X 15464923 15464928 + X_15464923_15464928_+ 0.999538437 0.995642174 0.997590305 0.002755029 CG6294 FBtr0308830 15464407 15465027 X + 15464888 15464945 5'utr CG6294 FlyBase G61549.1 TTTATTTATTGATAAGCCTTATCGCTGTTACTATGATTCGAAAATGCGTGATAGTTAA 11 15464932 0.9840066 5 10 80 0.928571429 1.113943352 0.071428571 0.272727273 0.428571429 11 1 0 13 X:15464888-15464945 6 CG6294 FBtr0308830 15464407 15465027 ATTCGA 6mer3-8 dme-miR-986-5p X + 15464905 15464945 5'utr CG6294 FlyBase G46481.1 CTTATCGCTGTTACTATGATTCGAAAATGCGTGATAGTTAA 5 15464932 0.979812771 3 5 35 1 0.903089987 0.125 0.6 0.75 5 0 0 8 X:15464905-15464945 6 7.5 3944 FBgn0030640 37.48 1.823333333 2.763333333 0.200106724 4.113345521 2.71411339 -9 -9 -9 0.15 dme-miR-307a-3p 6mer2-7 GTTGTG X 15579482 15579487 + X_15579482_15579487_+ 0.999621137 0.999441564 0.99953135 0.000126926 CG7872 FBtr0074046 15579434 15579857 X + 15579424 15579549 stop_codon CG7872 FlyBase G61572.1 TTTGAGGATTAGCCGCTGCTCTGCGATGTTCAAGTTTCATTGTTCCATCTAAAAGTCTGTTGTGTGCGTGTTGTAAAACCGATCCCAAATTCCTCGCCCTCGGCATCCCCATACCGTCTAAATTTT 75 15579483 0.987354063 14 69 602 0.929411765 1.596597096 0.294117647 0.133333333 0.235294118 75 5 1 79 X:15579424-15579549 6 CG7872 FBtr0074046 15579434 15579857 GTTGTG 6mer2-7 dme-miR-307a-3p X + 15579461 15579550 3'utr CG7872 FlyBase G46500.1 CATTGTTCCATCTAAAAGTCTGTTGTGTGCGTGTTGTAAAACCGATCCCAAATTCCTCGCCCTCGGCATCCCCATACCGTCTAAATTTTG 50 15579483 0.919210266 12 44 381 0.907894737 1.236789099 0.315789474 0.34 0.565789474 50 4 3 69 X:15579461-15579550 6 38.5 3945 FBgn0030658 603.0033333 44.82333333 68.86333333 0.063847077 0.858927642 0.559078368 -1 -1 -1 0.15 dme-bantam-3p 6mer3-8 TGATCT X 15585131 15585136 + X_15585131_15585136_+ 0.983279148 0.874709237 0.928994192 0.076770513 CG8097 FBtr0340344 15584989 15585249 X + 15585032 15585218 3'utr CG8097 FlyBase G61584.1 AAAAAACACAAAAACAAGAGGCTAATGCGAAACCATAGCAAAACTAAATGCTGGCTCAACAGTGGGCGGTAATAATATATGTAATAATATAATGACATGTGATCTTAAAAGGGCCATACAATATTGATATAACATAGTTACACCTCTCATTTTATCGATAATAATCAAAATATAGCAGTATCTACTT 122 15585131 0.965562643 23 120 637 0.986206897 2.155336037 0.131034483 0.147540984 0.282758621 122 2 0 143 X:15585032-15585218 6 CG8097 FBtr0340344 15584989 15585249 TGATCT 6mer3-8 dme-bantam-3p X + 15585026 15585179 3'utr CG8097 FlyBase G46509.1 AAAAAAAAAAAACACAAAAACAAGAGGCTAATGCGAAACCATAGCAAAACTAAATGCTGGCTCAACAGTGGGCGGTAATAATATATGTAATAATATAATGACATGTGATCTTAAAAGGGCCATACAATATTGATATAACATAGTTACACCTCTC 99 15585131 0.961362524 14 94 473 0.97260274 1.851258349 0.164383562 0.363636364 0.568493151 99 3 1 142 X:15585026-15585179 6 67 3946 FBgn0030660 130.6666667 8.276666667 12.6 0.512755102 8.095046315 5.317460317 0 0 0 0.15 dme-miR-8-3p 6mer2-7 AGTATT X 15585528 15585533 - X_15585528_15585533_- 0.523190771 0.815570361 0.669380566 0.206743598 CG9220 FBtr0074064|FBtr0340347 15585287|15585287 15585993|15585993 X - 15585494 15585530 3'utr CG9220 FlyBase G67612.1 ATTTTAATGGTTGGCAGTCCCTTAGAAATAATAAATT 8 15585509 0.711000156 4 8 55 1 0.903089987 0.125 0 0 8 0 0 8 X:15585494-15585530 3 CG9220 FBtr0074064|FBtr0340347 15585287|15585287 15585993|15585993 AGTATT 6mer2-7 dme-miR-8-3p X - 15585495 15585562 3'utr CG9220 FlyBase G50882.1 ATTGTATAGATAATTATTAGGAAATACAAAGTATTTTAATGGTTGGCAGTCCCTTAGAAATAATAAAT 11 15585519 0.980119835 6 11 76 1 1.204119983 0.3125 0.363636364 0.5625 11 0 0 16 X:15585495-15585562 6 3.5 3947 FBgn0030662 132.6 4.106666667 6.293333333 0.026395173 0.852272727 0.556144068 -24 -14 -19 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 15585646 15585651 - X_15585646_15585651_- 0.999999175 0.996390366 0.998194771 0.002551807 CG9220 FBtr0074064|FBtr0340347 15585287|15585287 15585993|15585993 X - 15585640 15585679 3'utr CG9220 FlyBase G67613.1 GGAACATTTATGGCGATTAAATGTAGTTACCAAAAATCAT 6 15585653 0.963419072 3 6 33 1 0.954242509 0.555555556 0.333333333 0.555555556 6 0 0 9 X:15585640-15585679 6 CG9220 FBtr0074064|FBtr0340347 15585287|15585287 15585993|15585993 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X - 15585598 15585716 3'utr CG9220 FlyBase G50883.1 ATGCTAAAAACAAATGAAATGTAAATAAGAGTAAAACGGAACATTTATGGCGATTAAATGTAGTTACCAAAAATCATTATTATGTATCTAATGATACATTGTTTTCTAACCAAAGTCGC 11 15585652 0.98168989 6 10 74 1 1.146128036 0.285714286 0.272727273 0.428571429 11 0 0 14 X:15585598-15585716 6 4 3948 FBgn0030662 132.6 4.106666667 6.293333333 0.030165913 0.974025974 0.63559322 2 1 1.5 0.15 dme-miR-92b-3p 6mer2-7 TGCAAT X 15701811 15701816 - X_15701811_15701816_- 0.857982699 0.995829552 0.926906126 0.097472478 Pis FBtr0074059|FBtr0074058 15701449|15701449 15703028|15702003 X - 15701740 15701945 3'utr Pis FlyBase G67630.1 AAATGAAACAACTCTTGATTCCAAGCTAAAAAAACAGAATTTTGAAGACGAATTGCGATCAGATGAAATATGGGCATTAGGCAACCAAATAGGCCGTAGTAGGAATTTAATTTATTTTTAATGCGCTATTGCAATGATTGTTGATTTTATTTGATATATTTTAGTTAGACGGGTGGTGAAATCACCCGACAATTTGTATTTAATAG 97 15701808 0.98313784 24 91 697 0.94017094 1.56427143 0.188034188 0.206185567 0.341880342 97 5 2 110 X:15701740-15701945 6 Pis FBtr0074059|FBtr0074058 15701449|15701449 15703028|15702003 TGCAAT 6mer2-7 dme-miR-92b-3p X - 15701781 15701828 3'utr Pis FlyBase G50896.1 TTAATGCGCTATTGCAATGATTGTTGATTTTATTTGATATATTTTAGT 30 15701807 0.690411725 11 29 334 0.978723404 1.662757832 0.404255319 0.4 0.617021277 30 1 0 46 X:15701781-15701828 6 27 3949 FBgn0030670 380.6666667 33.08333333 50.32333333 0.070928196 0.816120907 0.536530437 -8 -9 -8.5 0.15 dme-bantam-3p 7mer-m8 TGATCTC X 15702113 15702119 - X_15702113_15702119_- 0.661487742 0.661614831 0.661551286 8.99E-05 Pis FBtr0074059 15701449 15703028 X - 15702053 15702137 3'utr Pis FlyBase G67632.1 TTGCCGTGCTCAAGGCCCTGATCTCGGTGATGCACGCCTACGTGGCGGGCATCGATCTGGCGGCCGTGGATGTACGCGAGCGGCA 46 15702110 0.970930719 7 42 238 0.918367347 1.051152522 0.244897959 0.043478261 0.102040816 46 1 3 45 X:15702053-15702137 7 Pis FBtr0074059 15701449 15703028 TGATCTC 7mer-m8 dme-bantam-3p X - 15702054 15702137 3'utr Pis FlyBase G50898.1 TTGCCGTGCTCAAGGCCCTGATCTCGGTGATGCACGCCTACGTGGCGGGCATCGATCTGGCGGCCGTGGATGTACGCGAGCGGC 20 15702110 0.967150286 6 18 98 0.9 1.431363764 0.166666667 0.4 0.6 20 3 0 27 X:15702054-15702137 7 29 3950 FBgn0030670 380.6666667 33.08333333 50.32333333 0.076182137 0.876574307 0.576273432 -9 -9 -9 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 15702290 15702295 - X_15702290_15702295_- 0.919496682 0.5645184 0.742007541 0.251007563 Pis FBtr0074059 15701449 15703028 X - 15702264 15702367 5'utr Pis FlyBase G67633.1 AATGCGATTGTATTACCAGAAGGACATACTCACATTCATGTGCTGCGTCAATGAGCTGTTTTACGTGTGCTTGTACCTCTTGCATTTCACCTACGGCCCGCTGA 43 15702288 0.837620263 10 38 362 0.905660377 1.204119983 0.301886792 0.186046512 0.339622642 43 3 2 48 X:15702264-15702367 6 Pis FBtr0074059 15701449 15703028 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X - 15702265 15702327 5'utr Pis FlyBase G50899.1 TGCTGCGTCAATGAGCTGTTTTACGTGTGCTTGTACCTCTTGCATTTCACCTACGGCCCGCTG 14 15702288 0.985631989 5 14 116 1 1.230448921 0.235294118 0.214285714 0.352941176 14 0 0 17 X:15702265-15702327 6 22 3951 FBgn0030670 380.6666667 33.08333333 50.32333333 0.057793345 0.664987406 0.437172948 -7 -7 -7 0.15 dme-miR-34-5p 6mer2-7 ACTGCC X 15706216 15706221 - X_15706216_15706221_- 0.999002328 0.998264007 0.998633167 0.000522057 CG9281 FBtr0074056|FBtr0074057 15705804|15705804 15706932|15706932 X - 15706195 15706257 3'utr CG9281 FlyBase G67636.1 AGTAGTCGCAGCAAATTGTGTGAGAAACGATGTTAAACTGCCCTCCCAAATCGGAACCGTGAT 133 15706219 0.872496801 9 126 624 0.987421384 1.894869657 0.616352201 0.172932331 0.308176101 133 1 1 157 X:15706195-15706257 6 CG9281 FBtr0074057|FBtr0074056 15705804|15705804 15706932|15706932 ACTGCC 6mer2-7 dme-miR-34-5p X - 15706149 15706257 3'utr CG9281 FlyBase G50902.1 AGTAGTCGCAGCAAATTGTGTGAGAAACGATGTTAAACTGCCCTCCCAAATCGGAACCGTGATTTAGTTGCTCGCGGATTCGAACAAGACAATTAAATATTCTTCGATT 84 15706219 0.965607003 7 79 423 0.96 1.602059991 0.664 0.357142857 0.568 84 3 2 120 X:15706149-15706257 6 96.5 3952 FBgn0030672 2569.26 100.7833333 155.7866667 0.037559453 0.957499587 0.619436837 -2 -2 -2 0.15 dme-miR-252-5p 6mer3-8 GTACTT X 15706350 15706355 - X_15706350_15706355_- 0.850616345 0.870561987 0.860589166 0.01410374 CG9281 FBtr0074056|FBtr0074057 15705804|15705804 15706932|15706932 X - 15706322 15706375 3'utr CG9281 FlyBase G67637.1 ATATATAAAAAATGAAAAGTGTACTTTATTTTTTTGTAATTTATTTAAGCCTTA 8 15706356 0.992272309 3 8 89 1 0.954242509 0 0.125 0.222222222 8 0 0 9 X:15706322-15706375 6 CG9281 FBtr0074057|FBtr0074056 15705804|15705804 15706932|15706932 GTACTT 6mer3-8 dme-miR-252-5p X - 15706305 15706363 3'utr CG9281 FlyBase G50903.1 TGAAAAGTGTACTTTATTTTTTTGTAATTTATTTAAGCCTTAACTATATATTTAAAAAT 5 15706356 0.988524404 3 5 52 1 0.77815125 0 0.2 0.333333333 5 0 0 6 X:15706305-15706363 6 4.5 3953 FBgn0030672 2569.26 100.7833333 155.7866667 0.001751477 0.04465024 0.028885656 1 1 1 0.15 dme-miR-318-3p 6mer2-7 CCAGTG X 15706914 15706919 - X_15706914_15706919_- 0.999818199 0.990671612 0.995244906 0.006467623 CG9281 FBtr0074056|FBtr0074057|FBtr0340308 15705804|15705804|15706444 15706932|15706932|15706932 X - 15706881 15706929 3'utr CG9281 FlyBase G67641.1 TATCCCATATCCAGTGGATAGATAGCTGCCAACGGCCACACACTCGCAC 11 15706916 0.951827528 4 10 44 1 1.146128036 0 0.272727273 0.428571429 11 0 0 14 X:15706881-15706929 6 CG9281 FBtr0074057|FBtr0340308|FBtr0074056 15705804|15706444|15705804 15706932|15706932|15706932 CCAGTG 6mer2-7 dme-miR-318-3p X - 15706893 15706929 3'utr CG9281 FlyBase G50907.1 TATCCCATATCCAGTGGATAGATAGCTGCCAACGGCC 7 15706915 0.968875269 3 6 31 1 1.113943352 0 0.571428571 0.769230769 7 0 0 13 X:15706893-15706929 6 8 3954 FBgn0030672 2569.26 100.7833333 155.7866667 0.003113737 0.079378204 0.051352277 -3 -4 -3.5 0.15 dme-miR-8-3p 6mer3-8 CAGTAT X 15712115 15712120 + X_15712115_15712120_+ 0.988971291 0.998667719 0.993819505 0.00685639 CG15601 FBtr0074055|FBtr0339684|FBtr0339685|FBtr0339683 15712008|15712008|15712008|15712008 15712186|15712186|15712309|15712186 X + 15712083 15712137 3'utr CG15601 FlyBase G61595.1 TCCAGGGGATATTTATCAACCCGTTTGCCATTCAGTATATGTAGTCAAGCTAGTT 23 15712113 0.99188917 4 18 197 0.75 1.322219295 0.357142857 0.217391304 0.357142857 23 7 0 21 X:15712083-15712137 6 CG15601 FBtr0339683|FBtr0339685|FBtr0339684|FBtr0074055 15712008|15712008|15712008|15712008 15712186|15712309|15712186|15712186 CAGTAT 6mer3-8 dme-miR-8-3p X + 15712089 15712137 3'utr CG15601 FlyBase G46517.1 GGATATTTATCAACCCGTTTGCCATTCAGTATATGTAGTCAAGCTAGTT 16 15712113 0.988872975 4 14 135 0.884615385 1.361727836 0.346153846 0.375 0.615384615 16 3 0 23 X:15712089-15712137 6 16.5 3955 FBgn0030673 63.26333333 6.943333333 10.57666667 0.260814585 2.376380221 1.560037819 2 2 2 0.15 dme-miR-184-3p 7mer-A1 CCGTCCA X 15733336 15733342 + X_15733336_15733342_+ 0.819664973 0.816919374 0.818292174 0.001941432 CG8191 FBtr0074083 15733227 15733663 X + 15733293 15733365 3'utr CG8191 FlyBase G61667.1 CTTCTCGCCCTTCTCGGCCAGGATCTCCTCGATGTTGCGCTTGCCGTCCAGATCTGTGAACCAGTTCAGATTG 65 15733334 0.825457773 8 62 461 0.963855422 1.903089987 0.084337349 0.153846154 0.337349398 65 3 0 80 X:15733293-15733365 7 CG8191 FBtr0074083 15733227 15733663 CCGTCCA 7mer-A1 dme-miR-184-3p X + 15733293 15733361 3'utr CG8191 FlyBase G46564.1 CTTCTCGCCCTTCTCGGCCAGGATCTCCTCGATGTTGCGCTTGCCGTCCAGATCTGTGAACCAGTTCAG 37 15733334 0.974929206 5 34 264 0.905660377 1.079181246 0.188679245 0.351351351 0.547169811 37 2 3 48 X:15733293-15733361 7 47.5 3956 FBgn0030675 21.07666667 1.743333333 2.686666667 2.253677052 27.24665392 17.67990074 2 2 2 0.15 dme-miR-307a-3p 6mer2-7 GTTGTG X 15735658 15735663 + X_15735658_15735663_+ 0.696546101 0.759930921 0.728238511 0.044819822 l(1)G0136 FBtr0074084|FBtr0332613 15735491|15735491 15735780|15735780 X + 15735647 15735758 3'utr l(1)G0136 FlyBase G61671.1 CTAAATATTAAGTTGTGTTCTATAGTTAAATTTTAGTTGTAGCGCTAGGTAAGTGACGCACCCGCTTCCTTGCCGCAGGCTGGCAGTTTGTCCTCTTTAGCCCTAGTTCAAT 17 15735659 0.991393947 9 17 186 1 1.255272505 0.055555556 0.058823529 0.111111111 17 0 0 18 X:15735647-15735758 6 l(1)G0136 FBtr0332613|FBtr0074084 15735491|15735491 15735780|15735780 GTTGTG 6mer2-7 dme-miR-307a-3p X + 15735649 15735701 3'utr l(1)G0136 FlyBase G46567.1 AAATATTAAGTTGTGTTCTATAGTTAAATTTTAGTTGTAGCGCTAGGTAAGTG 11 15735659 0.993122932 7 10 115 0.842105263 1.204119983 0.105263158 0.454545455 0.684210526 11 3 0 16 X:15735649-15735701 6 8.5 3957 FBgn0026666 97.33333333 15.83666667 24.21333333 0.087328767 0.53672911 0.351046256 -1 -1 -1 0.15 dme-miR-304-5p 7mer-m8 TGAGATT X 15741420 15741426 - X_15741420_15741426_- 0.620199757 0.620203136 0.620201446 2.33E-06 CG8944 FBtr0074201 15741341 15743214 X - 15741403 15741453 3'utr CG8944 FlyBase G67665.1 AATTTTATTTATCTTAGTAATACCGAATGAGATTTTAGTACCATACAATAT 50 15741426 0.877165987 4 49 390 0.983050847 1.763427994 0.169491525 0.14 0.271186441 50 1 0 58 X:15741403-15741453 7 CG8944 FBtr0074201 15741341 15743214 TGAGATT 7mer-m8 dme-miR-304-5p X - 15741407 15741447 3'utr CG8944 FlyBase G50924.1 ATTTATCTTAGTAATACCGAATGAGATTTTAGTACCATACA 23 15741426 0.853096921 4 22 173 1 1.62324929 0.023809524 0.608695652 0.785714286 23 0 0 42 X:15741407-15741447 7 35.5 3958 FBgn0030680 574.6266667 15.99666667 24.55666667 0.061779242 2.219212336 1.445635944 0 0 0 0.15 dme-miR-305-3p 6mer3-8 ATGTGC X 15742210 15742215 - X_15742210_15742215_- 0.987270626 0.998861346 0.993065986 0.008195863 CG8944 FBtr0074201 15741341 15743214 X - 15742184 15742217 3'utr CG8944 FlyBase G67670.1 TAATGTGCAGGACGTTGCGTGGCCATTGACGCAT 9 15742214 0.912502726 2 9 53 1 1 0 0.111111111 0.2 9 0 0 10 X:15742184-15742217 6 CG8944 FBtr0074201 15741341 15743214 ATGTGC 6mer3-8 dme-miR-305-3p X - 15742182 15742218 3'utr CG8944 FlyBase G50929.1 ATAATGTGCAGGACGTTGCGTGGCCATTGACGCATTG 8 15742212 0.854036745 4 8 57 1 1.176091259 0 0.625 0.8 8 0 0 15 X:15742182-15742218 6 8.5 3959 FBgn0030680 574.6266667 15.99666667 24.55666667 0.014792213 0.5313607 0.346138184 -1 -3 -2 0.15 dme-miR-184-3p 6mer2-7 CCGTCC X 15742467 15742472 - X_15742467_15742472_- 0.999997032 0.999978383 0.999987708 1.32E-05 CG8944 FBtr0074201 15741341 15743214 X - 15742396 15742538 3'utr CG8944 FlyBase G67672.1 TCTTCTCTCCAGACACACACAGCATTACAATCTGATTATTGATGTAAGAATTGTATACATTCCTTCCCGTCCCGCGATAATCGATGTGAGCGAGTAGATGCATTCCAGAACTAAGTATTTCATAAAGTATTCTATGTACTAAC 57 15742476 0.977225945 12 56 368 0.985714286 1.838849091 0.085714286 0.210526316 0.357142857 57 1 0 69 X:15742396-15742538 6 CG8944 FBtr0074201 15741341 15743214 CCGTCC 6mer2-7 dme-miR-184-3p X - 15742392 15742520 3'utr CG8944 FlyBase G50931.1 ACAGCATTACAATCTGATTATTGATGTAAGAATTGTATACATTCCTTCCCGTCCCGCGATAATCGATGTGAGCGAGTAGATGCATTCCAGAACTAAGTATTTCATAAAGTATTCTATGTACTAACTATA 46 15742475 0.977517176 12 42 283 0.940298507 1.498310554 0.28358209 0.260869565 0.492537313 46 3 1 63 X:15742392-15742520 6 37 3960 FBgn0030680 574.6266667 15.99666667 24.55666667 0.064389633 2.312981871 1.506719153 4 3 3.5 0.15 dme-miR-33-5p 7mer-A1 AATGCAA X 15742708 15742714 - X_15742708_15742714_- 0.781391907 0.782838337 0.782115122 0.001022759 CG8944 FBtr0074201 15741341 15743214 X - 15742669 15742780 3'utr CG8944 FlyBase G67673.1 TCTATTCGAATCCACTTACCTGTAGACGTACTTAAACACAAAAAGTATTTAACAACAACGCCCATGAATGCAACTTTAGTTCTAAGAAATTGGTAGAACACTTACACTTCCT 138 15742716 0.961568986 15 124 764 0.896969697 1.392110465 0.066666667 0.173913043 0.309090909 138 12 5 148 X:15742669-15742780 7 CG8944 FBtr0074201 15741341 15743214 AATGCAA 7mer-A1 dme-miR-33-5p X - 15742661 15742737 3'utr CG8944 FlyBase G50932.1 AGTATTTAACAACAACGCCCATGAATGCAACTTTAGTTCTAAGAAATTGGTAGAACACTTACACTTCCTTTGACTTC 50 15742716 0.97091796 7 45 263 0.9 1.799340549 0 0.34 0.528571429 50 7 0 63 X:15742661-15742737 7 69.5 3961 FBgn0030680 574.6266667 15.99666667 24.55666667 0.120948094 4.344655136 2.830188679 2 2 2 0.15 dme-miR-79-3p 7mer-m8 TAGCTTT X 15743029 15743035 - X_15743029_15743035_- 0.618390908 0.605449815 0.611920361 0.00915074 CG8944 FBtr0074201 15741341 15743214 X - 15742979 15743101 3'utr CG8944 FlyBase G67675.1 ACTAAAATTGAAACTGTAACTGCAACTGTAACATCTTTAAATTGCCAGCTACTTAGGCAACTTAGTTAGCTTTCTTAATCTTAGTTTTAGATTCACTCGATGTTCAGATCTATTTTGCAATTT 38 15743036 0.98396837 16 38 331 1 1.681241237 0.145833333 0.236842105 0.395833333 38 0 0 48 X:15742979-15743101 7 CG8944 FBtr0074201 15741341 15743214 TAGCTTT 7mer-m8 dme-miR-79-3p X - 15743014 15743103 3'utr CG8944 FlyBase G50936.2 TAACTAAAATTGAAACTGTAACTGCAACTGTAACATCTTTAAATTGCCAGCTACTTAGGCAACTTAGTTAGCTTTCTTAATCTTAGTTTT 26 15743036 0.986012817 7 23 201 0.955555556 1.633468456 0.088888889 0.423076923 0.666666667 26 2 0 43 X:15743014-15743103 7 15.5 3962 FBgn0030680 574.6266667 15.99666667 24.55666667 0.026974035 0.968951865 0.631193159 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 15751631 15751637 + X_15751631_15751637_+ 0.673634884 0.613940344 0.643787614 0.042210456 CG8239 FBtr0346188|FBtr0346188|FBtr0346188 15750934|15750934|15750934 15751737|15751737|15751737 X + 15751612 15751654 3'utr CG8239 FlyBase G61696.1 TTTAGGTTTGCGACCAACTTGTGATAAAAAAAAACCGCCCAAA 17 15751630 0.967457038 3 16 89 0.95 0.977723605 0.1 0.176470588 0.3 17 0 1 19 X:15751612-15751654 7 CG8239 FBtr0346188|FBtr0346188|FBtr0346188 15750934|15750934|15750934 15751737|15751737|15751737 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X + 15751612 15751651 3'utr CG8239 FlyBase G46588.1 TTTAGGTTTGCGACCAACTTGTGATAAAAAAAAACCGCCC 13 15751630 0.977635094 3 11 76 0.913043478 1.021189299 0 0.384615385 0.652173913 13 1 1 21 X:15751612-15751651 7 15 3963 FBgn0030683 250.2766667 19.80666667 30.47 0.059933673 0.757320767 0.492287496 1 1 1 0.15 dme-miR-252-5p 7mer-m8 GTACTTA X 15751984 15751990 - X_15751984_15751990_- 0.58609991 0.581720226 0.583910068 0.003096916 Graf FBtr0074198|FBtr0340306|FBtr0074194|FBtr0345133|FBtr0340305|FBtr0340307|FBtr0074197 15751672|15751672|15751672|15751672|15751672|15751672|15751672 15752232|15752232|15752232|15752232|15752232|15752232|15752232 X - 15751922 15752019 3'utr Graf FlyBase G67686.2 TAACCTTTATAATACCATGACCATACAATGTACTTATTTTTAATTATTTAATAAGGAGTATAAACTCAGTGCAACTGCAAAGATTTATTTACTAATTG 49 15751991 0.953992865 9 46 455 0.983333333 1.770852012 0.116666667 0.224489796 0.366666667 49 1 0 59 X:15751922-15752019 7 Graf FBtr0340305|FBtr0340307|FBtr0074197|FBtr0074198|FBtr0340306|FBtr0074194|FBtr0345133 15751672|15751672|15751672|15751672|15751672|15751672|15751672 15752232|15752232|15752232|15752232|15752232|15752232|15752232 GTACTTA 7mer-m8 dme-miR-252-5p X - 15751924 15752015 3'utr Graf FlyBase G50941.3 CTTTATAATACCATGACCATACAATGTACTTATTTTTAATTATTTAATAAGGAGTATAAACTCAGTGCAACTGCAAAGATTTATTTACTAAT 31 15751991 0.871099308 7 26 269 0.86 1.156347201 0 0.451612903 0.66 31 5 2 43 X:15751924-15752015 7 27 3964 FBgn0030685 2113.673333 59.81666667 91.46666667 0.01277397 0.451379214 0.295189504 1 1 1 0.15 dme-miR-308-3p 7mer-m1 TGTGATT X 15793951 15793957 - X_15793951_15793957_- 0.521223819 0.521173194 0.521198507 3.58E-05 CG8974 FBtr0074186|FBtr0074187|FBtr0074189|FBtr0074185|FBtr0074188 15793719|15793719|15793719|15793719|15793719 15794100|15794100|15794100|15794100|15794100 X - 15793916 15793976 3'utr CG8974 FlyBase G67727.1 GTTGGGCAATAGTCGTTGGTGTGATTAATTAACATAAATTGTTAGCATTCGGTTATAATTG 24 15793950 0.990269412 8 22 223 0.896551724 1.414973348 0.344827586 0.208333333 0.344827586 24 3 0 26 X:15793916-15793976 7 CG8974 FBtr0074185|FBtr0074188|FBtr0074187|FBtr0074189|FBtr0074186 15793719|15793719|15793719|15793719|15793719 15794100|15794100|15794100|15794100|15794100 TGTGATT 7mer-m1 dme-miR-308-3p X - 15793916 15793986 3'utr CG8974 FlyBase G50962.1 TCTTAAACTCGTTGGGCAATAGTCGTTGGTGTGATTAATTAACATAAATTGTTAGCATTCGGTTATAATTG 23 15793950 0.9882527 6 22 199 1 1.51851394 0.272727273 0.260869565 0.484848485 23 0 0 33 X:15793916-15793986 7 19 3965 FBgn0030693 519 47.39666667 72.25333333 0.036608863 0.400872073 0.262963646 -7 -7 -7 0.15 dme-miR-308-3p 7mer-m1 TGTGATT X 15797138 15797144 - X_15797138_15797144_- 0.521162638 0.520236184 0.520699411 0.000655064 CG32581 FBtr0113439|FBtr0074184 15796906|15796906 15797252|15797252 X - 15797103 15797155 3'utr CG32581 FlyBase G67735.1 ATAGTCGTTGGTGTGATTAATTAACATAAATTGTTAGCATTCGGTTATAATTG 8 15797137 0.986915946 5 8 75 1 1 0.2 0.25 0.4 8 0 0 10 X:15797103-15797155 7 CG32581 FBtr0074184|FBtr0113439 15796906|15796906 15797252|15797252 TGTGATT 7mer-m1 dme-miR-308-3p X - 15797123 15797154 3'utr CG32581 FlyBase G50969.1 TAGTCGTTGGTGTGATTAATTAACATAAATTG 9 15797136 0.74042703 3 9 75 1 1.113943352 0.076923077 0.222222222 0.461538462 9 0 0 13 X:15797123-15797154 7 8 3966 FBgn0052581 0 0 0 Inf Inf Inf -7 -8 -7.5 0.15 dme-miR-932-5p 6mer2-7 GAATTG X 15824574 15824579 + X_15824574_15824579_+ 0.984319081 0.985229828 0.984774455 0.000643962 sd FBtr0112826|FBtr0074101|FBtr0308134|FBtr0310311|FBtr0074100|FBtr0346799|FBtr0308133|FBtr0308130|FBtr0308129|FBtr0112824|FBtr0112825|FBtr0112827|FBtr0074099|FBtr0308128|FBtr0340115|FBtr0310312|FBtr0310313|FBtr0308131|FBtr0308132|FBtr0301543|FBtr0301544 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15825722|15825722|15825722|15825722|15825722|15827682|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825495|15825495|15827681|15826608|15825722|15825722 X + 15824551 15824605 3'utr sd FlyBase G61750.1 AATAGTATCATCAATACGGCTAAGAATTGCGATAATAAGACGAGTAATGAAATTG 19 15824577 0.802784441 4 12 93 0.681818182 0.698970004 0.136363636 0.105263158 0.227272727 19 5 2 15 X:15824551-15824605 6 sd FBtr0346799|FBtr0310313|FBtr0301543|FBtr0308130|FBtr0308132|FBtr0074101|FBtr0308129|FBtr0112824|FBtr0310311|FBtr0074099|FBtr0308128|FBtr0308131|FBtr0074100|FBtr0301544|FBtr0308133|FBtr0112825|FBtr0112827|FBtr0112826|FBtr0340115|FBtr0310312|FBtr0308134 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15827682|15825495|15825722|15825722|15826608|15825722|15825722|15825722|15825722|15825722|15825722|15827681|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825495|15825722 GAATTG 6mer2-7 dme-miR-932-5p X + 15824566 15824610 3'utr sd FlyBase G46625.1 ACGGCTAAGAATTGCGATAATAAGACGAGTAATGAAATTGCCAAC 14 15824577 0.95915564 4 11 64 0.818181818 0.653212514 0.045454545 0.5 0.681818182 14 1 3 18 X:15824566-15824610 6 13 3967 FBgn0003345 3188.213333 125.3966667 192.3633333 0.004077519 0.103671017 0.067580447 -3 -3 -3 0.15 dme-miR-282-5p 6mer2-7 GAGGCT X 15825052 15825057 + X_15825052_15825057_+ 0.892994336 0.901132179 0.897063258 0.005754364 sd FBtr0112826|FBtr0074101|FBtr0308134|FBtr0310311|FBtr0074100|FBtr0346799|FBtr0308133|FBtr0308130|FBtr0308129|FBtr0112824|FBtr0112825|FBtr0112827|FBtr0074099|FBtr0308128|FBtr0340115|FBtr0310312|FBtr0310313|FBtr0308131|FBtr0308132|FBtr0301543|FBtr0301544 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15825722|15825722|15825722|15825722|15825722|15827682|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825495|15825495|15827681|15826608|15825722|15825722 X + 15825032 15825073 3'utr sd FlyBase G61753.1 ACAAGCAACCACAACCATTCGAGGCTGAGCAACACGAACACG 42 15825049 0.803691446 2 41 83 0.980392157 1.698970004 0.156862745 0.214285714 0.352941176 42 1 0 50 X:15825032-15825073 6 sd FBtr0346799|FBtr0310313|FBtr0301543|FBtr0308130|FBtr0308132|FBtr0074101|FBtr0308129|FBtr0112824|FBtr0310311|FBtr0074099|FBtr0308128|FBtr0308131|FBtr0074100|FBtr0301544|FBtr0308133|FBtr0112825|FBtr0112827|FBtr0112826|FBtr0340115|FBtr0310312|FBtr0308134 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15827682|15825495|15825722|15825722|15826608|15825722|15825722|15825722|15825722|15825722|15825722|15827681|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825495|15825722 GAGGCT 6mer2-7 dme-miR-282-5p X + 15825034 15825064 3'utr sd FlyBase G46627.1 AAGCAACCACAACCATTCGAGGCTGAGCAAC 19 15825050 0.822868326 2 18 39 0.891891892 1.51851394 0.081081081 0.684210526 0.837837838 19 4 0 33 X:15825034-15825064 6 30.5 3968 FBgn0003345 3188.213333 125.3966667 192.3633333 0.009566487 0.243228156 0.158554125 3 2 2.5 0.15 dme-miR-282-5p 6mer2-7 GAGGCT X 15825420 15825425 + X_15825420_15825425_+ 0.985018179 0.999868364 0.992443272 0.010500677 sd FBtr0112826|FBtr0074101|FBtr0308134|FBtr0310311|FBtr0074100|FBtr0346799|FBtr0308133|FBtr0308130|FBtr0308129|FBtr0112824|FBtr0112825|FBtr0112827|FBtr0074099|FBtr0308128|FBtr0340115|FBtr0310312|FBtr0310313|FBtr0308131|FBtr0308132|FBtr0301543|FBtr0301544 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15825722|15825722|15825722|15825722|15825722|15827682|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825495|15825495|15827681|15826608|15825722|15825722 X + 15825338 15825503 3'utr sd FlyBase G61756.1 GAGGACCCAACGCCGATGGAATCAGTAACAAAGGCCGTGAGCCGTGAGCGCCATATAATACCACCAGCCTTTAAGCAAGGTTGAGGCTTATTTTAAGGGTTAGAAATACGATTGCAAGGAACGACACAATCAGAGCTTTTTGTTTTCCACCCAAAACGAGAAAGAA 80 15825419 0.970365173 18 76 435 0.957894737 1.959041392 0.084210526 0.1625 0.294736842 80 4 0 91 X:15825338-15825503 6 sd FBtr0346799|FBtr0310313|FBtr0301543|FBtr0308130|FBtr0308132|FBtr0074101|FBtr0308129|FBtr0112824|FBtr0310311|FBtr0074099|FBtr0308128|FBtr0308131|FBtr0074100|FBtr0301544|FBtr0308133|FBtr0112825|FBtr0112827|FBtr0112826|FBtr0340115|FBtr0310312|FBtr0308134 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15827682|15825495|15825722|15825722|15826608|15825722|15825722|15825722|15825722|15825722|15825722|15827681|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825495|15825722 GAGGCT 6mer2-7 dme-miR-282-5p X + 15825346 15825479 3'utr sd FlyBase G46629.1 AACGCCGATGGAATCAGTAACAAAGGCCGTGAGCCGTGAGCGCCATATAATACCACCAGCCTTTAAGCAAGGTTGAGGCTTATTTTAAGGGTTAGAAATACGATTGCAAGGAACGACACAATCAGAGCTTTTTG 29 15825419 0.95973905 10 28 139 1 1.643452676 0.204545455 0.448275862 0.636363636 29 0 0 44 X:15825346-15825479 6 20.5 3969 FBgn0003345 3188.213333 125.3966667 192.3633333 0.006429934 0.16348122 0.106569166 1 1 1 0.15 dme-miR-317-3p 7mer-A1 GTGTTCA X 15825573 15825579 + X_15825573_15825579_+ 0.822576886 0.822887804 0.822732345 0.000219839 sd FBtr0112826|FBtr0074101|FBtr0308134|FBtr0310311|FBtr0074100|FBtr0346799|FBtr0308133|FBtr0308130|FBtr0308129|FBtr0112824|FBtr0112825|FBtr0112827|FBtr0074099|FBtr0308128|FBtr0340115|FBtr0308131|FBtr0308132|FBtr0301543|FBtr0301544 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15825722|15825722|15825722|15825722|15825722|15827682|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15827681|15826608|15825722|15825722 X + 15825515 15825616 3'utr sd FlyBase G61757.1 AAAAAAACCACATGGCAGGGGACAATGGAAGAGCCTCAAAACAAGAGATGATTGATTGGTGTTCAGTATCGAAATCAGATTTTTATTTGTGCAAAATAAAAA 36 15825568 0.94907559 15 33 206 0.928571429 1.591064607 0.166666667 0.111111111 0.238095238 36 3 0 39 X:15825515-15825616 7 sd FBtr0346799|FBtr0301543|FBtr0308130|FBtr0308132|FBtr0074101|FBtr0308129|FBtr0112824|FBtr0310311|FBtr0074099|FBtr0308128|FBtr0308131|FBtr0074100|FBtr0301544|FBtr0308133|FBtr0112825|FBtr0112827|FBtr0112826|FBtr0340115|FBtr0308134 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15827682|15825722|15825722|15826608|15825722|15825722|15825722|15825722|15825722|15825722|15827681|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722 GTGTTCA 7mer-A1 dme-miR-317-3p X + 15825557 15825613 3'utr sd FlyBase G46631.1 AAGAGATGATTGATTGGTGTTCAGTATCGAAATCAGATTTTTATTTGTGCAAAATAA 7 15825573 0.982724955 4 7 57 1 0.954242509 0.222222222 0.285714286 0.444444444 7 0 0 9 X:15825557-15825613 7 10 3970 FBgn0003345 3188.213333 125.3966667 192.3633333 0.003136553 0.079746936 0.051984959 5 0 2.5 0.15 dme-bantam-3p 8mer-A1 TGATCTCA X 15825755 15825762 + X_15825755_15825762_+ 0.631132238 0.631131943 0.63113209 2.12E-07 sd FBtr0346799|FBtr0308131|FBtr0308132 15824447|15824447|15824447 15827682|15827681|15826608 X + 15825728 15825784 3'utr sd FlyBase G61759.1 AAAAACAAAAAAAAAAATACATTTAAATGATCTCAAAGTTACTTAAAACATATTTTT 691 15825754 0.966940761 12 668 4799 0.97260274 2.152288344 0.180365297 0.218523878 0.383561644 691 19 5 852 X:15825728-15825784 8 sd FBtr0346799|FBtr0308132|FBtr0308131 15824447|15824447|15824447 15827682|15826608|15827681 TGATCTCA 8mer-A1 dme-bantam-3p X + 15825730 15825801 3'utr sd FlyBase G46633.1 AAACAAAAAAAAAAATACATTTAAATGATCTCAAAGTTACTTAAAACATATTTTTTGTGTATAATTTTTTTT 588 15825754 0.981386736 13 561 4084 0.957972806 1.986211716 0.196538937 0.294217687 0.487021014 588 27 7 775 X:15825730-15825801 8 637.5 3971 FBgn0003345 3188.213333 125.3966667 192.3633333 0.199955252 5.083867195 3.314041137 1 1 1 0.15 dme-miR-305-3p 6mer3-8 ATGTGC X 15825995 15826000 + X_15825995_15826000_+ 0.582003017 0.836777345 0.709390181 0.180152635 sd FBtr0346799|FBtr0308131|FBtr0308132 15824447|15824447|15824447 15827682|15827681|15826608 X + 15825896 15826015 3'utr sd FlyBase G61760.1 AAGAGTATATATATTGAATAATATGTTTGAAACAAAGAACGCCGCAAAAGAAACAGATACAATATAGTTTTCCGAATTACCATTTAGATATGCATGGTCATGTGCAAATAGGATTAAGCC 14 15825979 0.983070797 9 14 111 1 1.204119983 0.1875 0.071428571 0.1875 14 0 0 16 X:15825896-15826015 6 sd FBtr0346799|FBtr0308132|FBtr0308131 15824447|15824447|15824447 15827682|15826608|15827681 ATGTGC 6mer3-8 dme-miR-305-3p X + 15825941 15826015 3'utr sd FlyBase G46635.1 AAAAGAAACAGATACAATATAGTTTTCCGAATTACCATTTAGATATGCATGGTCATGTGCAAATAGGATTAAGCC 12 15825979 0.98554193 7 12 92 1 1.255272505 0.111111111 0.25 0.5 12 0 0 18 X:15825941-15826015 6 6 3972 FBgn0003345 3188.213333 125.3966667 192.3633333 0.001881932 0.047848162 0.031190975 16 16 16 0.15 dme-miR-317-3p 6mer3-8 TGTGTT X 15826354 15826359 + X_15826354_15826359_+ 0.999997362 0.999613945 0.999805654 0.000271175 sd FBtr0346799|FBtr0308131|FBtr0308132 15824447|15824447|15824447 15827682|15827681|15826608 X + 15826323 15826363 3'utr sd FlyBase G61763.2 CAAAGGAGCGAGGGAGCGTAGGAGGATCTTGTGTGTTAAGC 7 15826353 0.976056522 5 6 31 0.875 0.84509804 0.375 0.142857143 0.25 7 1 0 7 X:15826323-15826363 6 sd FBtr0346799|FBtr0308132|FBtr0308131 15824447|15824447|15824447 15827682|15826608|15827681 TGTGTT 6mer3-8 dme-miR-317-3p X + 15826284 15826364 3'utr sd FlyBase G46637.1 TCCTGTCGTGGGAGCGCGAGTGTTGTGAGGTGAGGAGGGCAAAGGAGCGAGGGAGCGTAGGAGGATCTTGTGTGTTAAGCG 14 15826353 0.982937289 5 11 75 0.826086957 1.278753601 0.47826087 0.5 0.695652174 14 4 0 19 X:15826284-15826364 6 7 3973 FBgn0003345 3188.213333 125.3966667 192.3633333 0.002195587 0.055822855 0.036389471 1 1 1 0.15 dme-miR-278-3p 6mer2-7 CCACCG X 15826445 15826450 + X_15826445_15826450_+ 0.99999977 0.999995219 0.999997494 3.25E-06 sd FBtr0346799|FBtr0308131|FBtr0308132 15824447|15824447|15824447 15827682|15827681|15826608 X + 15826391 15826464 3'utr sd FlyBase G61764.1 CATAGTGGCAAAAATGGATATGTAAGTAATTGAATTAAGCATGTGTCGAATGATCCACCGTTAATTAAATTATT 42 15826451 0.979624202 8 42 292 1 1.698970004 0 0.166666667 0.3 42 0 0 50 X:15826391-15826464 6 sd FBtr0346799|FBtr0308132|FBtr0308131 15824447|15824447|15824447 15827682|15826608|15827681 CCACCG 6mer2-7 dme-miR-278-3p X + 15826416 15826463 3'utr sd FlyBase G46638.1 GTAATTGAATTAAGCATGTGTCGAATGATCCACCGTTAATTAAATTAT 23 15826451 0.984871112 5 21 171 0.9375 1.477121255 0.0625 0.260869565 0.46875 23 2 0 30 X:15826416-15826463 6 31 3974 FBgn0003345 3188.213333 125.3966667 192.3633333 0.009723314 0.247215503 0.161153373 -6 -6 -6 0.15 dme-miR-999-3p 6mer2-7 GTTAAC X 15850014 15850019 - X_15850014_15850019_- 0.973920328 0.982378513 0.978149421 0.005980851 UBL3 FBtr0300787|FBtr0074174 15849729|15849729 15850363|15850363 X - 15850009 15850036 3'utr UBL3 FlyBase G67789.1 TTTTAGAAACCGGACTTGTTAACCTAAT 11 15850018 0.618038209 4 10 59 0.923076923 1.079181246 0.076923077 0.090909091 0.230769231 11 1 0 12 X:15850009-15850036 6 UBL3 FBtr0300787|FBtr0074174 15849729|15849729 15850363|15850363 GTTAAC 6mer2-7 dme-miR-999-3p X - 15849997 15850038 3'utr UBL3 FlyBase G51029.1 GCTTTTAGAAACCGGACTTGTTAACCTAATTAGAGAATGGGT 13 15850018 0.956789701 4 11 78 0.952380952 1.301029996 0.285714286 0.461538462 0.666666667 13 1 0 20 X:15849997-15850038 6 11.5 3975 FBgn0026076 761.7933333 45.88 70.04333333 0.015095958 0.25065388 0.164184077 -1 -1 -1 0.15 dme-miR-277-3p 6mer3-8 TGCATT X 15862920 15862925 + X_15862920_15862925_+ 0.861207603 0.619733312 0.740470457 0.170748115 Gbeta13F FBtr0074107|FBtr0074111|FBtr0074106|FBtr0346794|FBtr0074110|FBtr0331597|FBtr0074108 15862795|15862795|15862795|15862795|15862795|15862795|15862795 15863177|15866084|15866084|15866084|15866084|15866084|15866175 X + 15862906 15863043 3'utr Gbeta13F FlyBase G61788.1 AAAGAACTTGAAAATGCATTAAAGGGTGGGGTGGGGTGTCAGGTCAACGGTTGCGCAGTCTGCGGATAGTGTTTCACCCATCATCTACATTGTGATCTAATGTATATGATTCGGTGTTACCGTCTCTGTGGTAAATAT 36 15862923 0.82190442 14 36 247 1 1.662757832 0.282608696 0.25 0.413043478 36 0 0 46 X:15862906-15863043 6 Gbeta13F FBtr0074108|FBtr0331597|FBtr0074110|FBtr0346794|FBtr0074106|FBtr0074111|FBtr0074107 15862795|15862795|15862795|15862795|15862795|15862795|15862795 15866175|15866084|15866084|15866084|15866084|15866084|15863177 TGCATT 6mer3-8 dme-miR-277-3p X + 15862893 15862944 3'utr Gbeta13F FlyBase G46656.1 AGAGGAAAAAGAAAAAGAACTTGAAAATGCATTAAAGGGTGGGGTGGGGTGT 23 15862923 0.955168166 5 23 108 1 1.505149978 0.28125 0.304347826 0.5 23 0 0 32 X:15862893-15862944 6 18 3976 FBgn0001105 5526.04 154.0466667 236.8166667 0.003257305 0.116847708 0.076008164 -3 -3 -3 0.15 dme-miR-308-3p 7mer-m1 TGTGATT X 15864781 15864787 + X_15864781_15864787_+ 0.521223848 0.521223813 0.521223831 0 Gbeta13F FBtr0074111|FBtr0074106|FBtr0346794|FBtr0074110|FBtr0331597|FBtr0074108 15862795|15862795|15862795|15862795|15862795|15862795 15866084|15866084|15866084|15866084|15866084|15866175 X + 15864698 15864809 3'utr Gbeta13F FlyBase G61796.1 TGTAATAAACTGATTGGTTTATTGACCTTCTTGAAGTATTCTTTAACGTTATAGTATCTTGGTCCGATAGGTAAATGGTAAATTGTGATTTAAAGTGAATAGTTTTTCAAGC 122 15864780 0.988532762 15 116 1074 0.963768116 1.646730386 0.282608696 0.123966942 0.231884058 121 3 2 133 X:15864698-15864809 7 Gbeta13F FBtr0074108|FBtr0331597|FBtr0074110|FBtr0346794|FBtr0074106|FBtr0074111 15862795|15862795|15862795|15862795|15862795|15862795 15866175|15866084|15866084|15866084|15866084|15866084 TGTGATT 7mer-m1 dme-miR-308-3p X + 15864760 15864803 3'utr Gbeta13F FlyBase G46666.1 TCCGATAGGTAAATGGTAAATTGTGATTTAAAGTGAATAGTTTT 80 15864780 0.653777165 6 80 661 1 2.045322979 0.297297297 0.325 0.513513514 80 0 0 111 X:15864760-15864803 7 97 3977 FBgn0001105 5526.04 154.0466667 236.8166667 0.017553257 0.629679318 0.40959955 1 1 1 0.15 dme-miR-14-3p 6mer3-8 AAGACT X 15876869 15876874 - X_15876869_15876874_- 0.986922879 0.997079918 0.992001399 0.007182084 tay FBtr0074167|FBtr0310065|FBtr0310066|FBtr0340414 15876681|15876366|15876681|15876681 15877234|15877234|15877234|15877234 X - 15876727 15876936 3'utr tay FlyBase G67818.1 GATTACGATGCAGATGCAGATGCAGATGTTTGTGGCAAACAAAAATCAAATTAAAAGAGGTTAAGACTTCCTTATACTTCAGACCTAGCATTCAACCTAAGCACTGAGTCCCCACATTGGCAAAATACTTTCCTCGATCTTAATATGGTCGCGCGTTGAAACGTCACATAAGTAATACGAACTTTACTTATTTTTAATGAATACAAATTA 173 15876876 0.978391699 22 161 1163 0.9375 1.653212514 0.015625 0.098265896 0.1875 173 9 3 180 X:15876727-15876936 6 tay FBtr0310066|FBtr0340414|FBtr0074167|FBtr0310065 15876681|15876681|15876681|15876366 15877234|15877234|15877234|15877234 AAGACT 6mer3-8 dme-miR-14-3p X - 15876757 15876951 3'utr tay FlyBase G51051.1 ACAGATGAAGATGAAGATTACGATGCAGATGCAGATGCAGATGTTTGTGGCAAACAAAAATCAAATTAAAAGAGGTTAAGACTTCCTTATACTTCAGACCTAGCATTCAACCTAAGCACTGAGTCCCCACATTGGCAAAATACTTTCCTCGATCTTAATATGGTCGCGCGTTGAAACGTCACATAAGTAATACGA 97 15876876 0.979746413 21 93 643 0.959459459 2.152288344 0.040540541 0.371134021 0.587837838 97 6 0 142 X:15876757-15876951 6 92 3978 FBgn0260938 850.7 11.95 18.32333333 0.108146233 7.69874477 5.020920502 2 2 2 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 15887724 15887729 - X_15887724_15887729_- 0.539103456 0.476736327 0.507919891 0.04410027 MSBP FBtr0301598|FBtr0301598|FBtr0301598|FBtr0333719|FBtr0333719|FBtr0333719|FBtr0074166|FBtr0074166|FBtr0074166 15887565|15887565|15887565|15887565|15887565|15887565|15887565|15887565|15887565 15888035|15888035|15888035|15888035|15888035|15888035|15888035|15888035|15888035 X - 15887570 15887783 3'utr MSBP FlyBase G67853.1 CTTAGAGTGCAGCCTTGACAAAAGCTATAGTTGTTACTATAATTCACGTTGTGATGTGATCTTGTTCCATATATTATAGTCGTATATTCATACAAATGTAACAAACGGAAATCATAAAATTATTTAAGGAGGAGGCCAATGTGTGGAGGGTATGGGAGTCATTTTCGTGGCAATATAAATTTAAATGTAACTATATTTGAAATACAAATTAAAT 109 15887722 0.986928977 32 109 941 1 2.123851641 0.210526316 0.174311927 0.323308271 109 0 0 133 X:15887570-15887783 6 MSBP FBtr0301598|FBtr0301598|FBtr0301598|FBtr0333719|FBtr0333719|FBtr0333719|FBtr0074166|FBtr0074166|FBtr0074166 15887565|15887565|15887565|15887565|15887565|15887565|15887565|15887565|15887565 15888035|15888035|15888035|15888035|15888035|15888035|15888035|15888035|15888035 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 15887693 15887769 3'utr MSBP FlyBase G51080.1 TTGACAAAAGCTATAGTTGTTACTATAATTCACGTTGTGATGTGATCTTGTTCCATATATTATAGTCGTATATTCAT 55 15887722 0.991410554 12 50 541 0.931818182 1.436692598 0.125 0.454545455 0.659090909 55 4 2 82 X:15887693-15887769 6 60.5 3979 FBgn0030703 1227.653333 105.4533333 161.41 0.049281013 0.573713491 0.374821882 -7 -7 -7 0.15 dme-bantam-3p 6mer3-8 TGATCT X 15904409 15904414 + X_15904409_15904414_+ 0.991760433 0.978200207 0.98498032 0.009588509 shi FBtr0074119|FBtr0301597|FBtr0111037|FBtr0074122|FBtr0074118|FBtr0333718|FBtr0111036|FBtr0074121 15903798|15903798|15903798|15903798|15903798|15903798|15903798|15903798 15905068|15905068|15905068|15905068|15905068|15905667|15905068|15905068 X + 15904315 15904489 3'utr shi FlyBase G61854.1 CCTCCCCTAACTCTCCACACATTATCAACGGCATACGCTCAAAAGTTATGTAAACTATTTGTATGGGCAGATGCTTAGTGACGATATTAACCAATGATCTTAATTATATAGCTAACTATTAATAAATAGCTTTCGTTAACTGCATTGTGTTGTTGTTGATGTTAAACTATAAAAA 167 15904409 0.987375016 20 161 1424 0.971428571 2.008600172 0.071428571 0.203592814 0.366666667 167 5 1 204 X:15904315-15904489 6 shi FBtr0074118|FBtr0111036|FBtr0074121|FBtr0333718|FBtr0301597|FBtr0074122|FBtr0074119|FBtr0111037 15903798|15903798|15903798|15903798|15903798|15903798|15903798|15903798 15905068|15905068|15905068|15905667|15905068|15905068|15905068|15905068 TGATCT 6mer3-8 dme-bantam-3p X + 15904324 15904476 3'utr shi FlyBase G46713.1 ACTCTCCACACATTATCAACGGCATACGCTCAAAAGTTATGTAAACTATTTGTATGGGCAGATGCTTAGTGACGATATTAACCAATGATCTTAATTATATAGCTAACTATTAATAAATAGCTTTCGTTAACTGCATTGTGTTGTTGTTGATGT 96 15904409 0.929642359 18 94 789 0.98630137 1.857332496 0.04109589 0.364583333 0.582191781 96 1 1 144 X:15904324-15904476 6 110 3980 FBgn0003392 1552.753333 51.10333333 78.22666667 0.070841902 2.152501468 1.406170104 0 0 0 0.15 dme-bantam-3p 6mer3-8 TGATCT X 15906135 15906140 + X_15906135_15906140_+ 0.999992439 0.99967636 0.999834399 0.000223446 shi FBtr0333717|FBtr0340413|FBtr0301594|FBtr0301596|FBtr0074123|FBtr0301595|FBtr0074124 15905923|15905923|15905923|15905923|15905923|15905923|15905923 15906716|15906716|15906252|15906252|15906252|15906252|15906252 X + 15906118 15906154 3'utr shi FlyBase G61863.1 AAAAAGTGTTTTACACATGATCTTTTGGACAATTCAA 11 15906135 0.887108386 3 11 108 1 1.041392685 0.636363636 0 0 11 0 0 11 X:15906118-15906154 6 shi FBtr0074123|FBtr0301595|FBtr0340413|FBtr0074124|FBtr0301594|FBtr0301596|FBtr0333717 15905923|15905923|15905923|15905923|15905923|15905923|15905923 15906252|15906252|15906716|15906252|15906252|15906252|15906716 TGATCT 6mer3-8 dme-bantam-3p X + 15906120 15906225 3'utr shi FlyBase G46719.1 AAAGTGTTTTACACATGATCTTTTGGACAATTCAACATTCAAATTAGTGCTTTCGAATTAAGTTTATCGGGGATACCATTTACTTTTTAAAGTATATTTGAACGTG 9 15906135 0.988686838 7 9 84 1 1 0.3 0.111111111 0.2 9 0 0 10 X:15906120-15906225 6 7.5 3981 FBgn0003392 1552.753333 51.10333333 78.22666667 0.00483013 0.146761464 0.095875234 0 0 0 0.15 dme-miR-1003-3p 7mer-A1 TGTGAGA X 15935696 15935702 - X_15935696_15935702_- 0.820544561 0.79358139 0.807062976 0.019065862 Stim FBtr0308705 15934899 15938324 X - 15935676 15935723 5'utr Stim FlyBase G67900.1 CTACAGTCGGCCAGAGAGGCTTGTGAGAAATTGCGTAAGAAACGGTCA 11 15935702 0.950522658 6 9 40 0.818181818 0.954242509 0.090909091 0 0 11 2 0 9 X:15935676-15935723 7 Stim FBtr0308705 15934899 15938324 TGTGAGA 7mer-A1 dme-miR-1003-3p X - 15935696 15935725 5'utr Stim FlyBase G51116.1 AGCTACAGTCGGCCAGAGAGGCTTGTGAGA 8 15935702 0.621104993 2 8 26 1 1.041392685 0.090909091 0.375 0.545454545 8 0 0 11 X:15935696-15935725 6 9.5 3982 FBgn0045073 1420.51 79.57666667 121.2 0.006687739 0.119381728 0.078382838 0 0 0 0.15 dme-miR-282-5p 7mer-A1 GAGGCTA X 15937659 15937665 - X_15937659_15937665_- 0.808302102 0.8199362 0.814119151 0.008226551 Stim FBtr0308705 15934899 15938324 X - 15937638 15937684 5'utr Stim FlyBase G67907.1 TCAGGATCGCTTTGGCATGGAGGCTATTGCCAGCTTGCATCGTCAGC 15 15937667 0.935609347 2 13 102 0.947368421 1.255272505 0.105263158 0.2 0.368421053 15 1 0 18 X:15937638-15937684 7 Stim FBtr0308705 15934899 15938324 GAGGCTA 7mer-A1 dme-miR-282-5p X - 15937640 15937683 5'utr Stim FlyBase G51118.1 CAGGATCGCTTTGGCATGGAGGCTATTGCCAGCTTGCATCGTCA 7 15937667 0.978262545 2 7 48 1 1.146128036 0.357142857 0.857142857 0.928571429 7 0 0 14 X:15937640-15937683 7 9 3983 FBgn0045073 1420.51 79.57666667 121.2 0.006335753 0.113098479 0.074257426 2 2 2 0.15 dme-miR-965-3p 7mer-m8 TACGCTT X 15944222 15944228 + X_15944222_15944228_+ 0.606540606 0.620075113 0.61330786 0.009570337 CG8924 FBtr0074130 15944054 15944449 X + 15944203 15944279 3'utr CG8924 FlyBase G61872.1 ATACATAGGTTTACTTAATTACGCTTTGGAGATGCCACAGTTTTATCCTTGGTTGAAAAACTCTTGCCGTTCAATCA 38 15944221 0.833567663 6 36 342 0.954545455 1.62324929 0.431818182 0.131578947 0.25 38 2 0 42 X:15944203-15944279 7 CG8924 FBtr0074130 15944054 15944449 TACGCTT 7mer-m8 dme-miR-965-3p X + 15944203 15944243 3'utr CG8924 FlyBase G46725.1 ATACATAGGTTTACTTAATTACGCTTTGGAGATGCCACAGT 27 15944221 0.658914449 5 26 259 0.955555556 1.633468456 0.577777778 0.407407407 0.644444444 27 2 0 43 X:15944203-15944243 7 29.5 3984 FBgn0030710 226.3333333 10.62 16.19333333 0.130338733 2.777777778 1.82173734 1 1 1 0.15 dme-miR-1012-3p 7mer-A1 TGACTAA X 15944343 15944349 + X_15944343_15944349_+ 0.682805981 0.823256318 0.75303115 0.09931336 CG8924 FBtr0074130 15944054 15944449 X + 15944320 15944393 3'utr CG8924 FlyBase G61873.1 ATGTATGCTATCAACAAGGATTATGACTAAAAACTTGCGTAAAAATTTCAATTATGTTTCTTGTCGCCCCAGTA 8 15944354 0.970474836 5 8 54 1 0.903089987 0 0 0 8 0 0 8 X:15944320-15944393 7 CG8924 FBtr0074130 15944054 15944449 TGACTAA 7mer-A1 dme-miR-1012-3p X + 15944325 15944360 3'utr CG8924 FlyBase G46726.1 TGCTATCAACAAGGATTATGACTAAAAACTTGCGTA 5 15944341 0.959969129 3 5 25 1 0.954242509 0.111111111 0.4 0.666666667 5 0 0 9 X:15944325-15944360 7 5.5 3985 FBgn0030710 226.3333333 10.62 16.19333333 0.024300442 0.517890772 0.339645945 -11 2 -4.5 0.15 dme-miR-79-3p 6mer2-7 AGCTTT X 15995132 15995137 + X_15995132_15995137_+ 0.997466834 0.999032352 0.998249593 0.001107046 exd FBtr0074137|FBtr0333322|FBtr0074135|FBtr0333323 15994971|15994971|15994971|15994971 15995996|15996509|15995996|15996509 X + 15995058 15995160 3'utr exd FlyBase G61892.1 AGTTTTTTCATAATTATGCGGCTTATATTTGCTTCTTCGCCAAGAACAACAATTCTTAAGGGATTTTTAAATTCAGCTTTCTGTCCTTTGGTTTCGAGTCAGA 42 15995136 0.97312565 14 37 397 0.910714286 1.40654018 0.267857143 0.214285714 0.410714286 42 4 1 51 X:15995058-15995160 6 exd FBtr0074135|FBtr0333323|FBtr0074137|FBtr0333322 15994971|15994971|15994971|15994971 15995996|15996509|15995996|15996509 AGCTTT 6mer2-7 dme-miR-79-3p X + 15995044 15995161 3'utr exd FlyBase G46740.1 AAAATCTAACATGCAGTTTTTTCATAATTATGCGGCTTATATTTGCTTCTTCGCCAAGAACAACAATTCTTAAGGGATTTTTAAATTCAGCTTTCTGTCCTTTGGTTTCGAGTCAGAT 28 15995136 0.993066792 11 23 279 0.88372093 1.579783597 0.162790698 0.321428571 0.558139535 28 5 0 38 X:15995044-15995161 6 20 3986 FBgn0000611 1497 64.64333333 99.30333333 0.013360053 0.309389986 0.201403108 -4 -4 -4 0.15 dme-miR-79-3p 6mer2-7 AGCTTT X 16078050 16078055 - X_16078050_16078055_- 0.992846308 0.992662524 0.992754416 0.000129966 Tob FBtr0301652|FBtr0310446 16074715|16077885 16079819|16079819 X - 16078037 16078074 5'utr Tob FlyBase G67976.1 AAGTTATTCAAGCTATGGAAGCTTTTACATATAAAAAC 13 16078059 0.850336211 2 12 104 0.888888889 1.204119983 0.055555556 0.307692308 0.5 13 2 0 16 X:16078037-16078074 6 Tob FBtr0310446|FBtr0301652 16077885|16074715 16079819|16079819 AGCTTT 6mer2-7 dme-miR-79-3p X - 16078036 16078074 5'utr Tob FlyBase G51168.1 AAGTTATTCAAGCTATGGAAGCTTTTACATATAAAAACA 8 16078059 0.975258079 2 8 62 1 0.954242509 0 0.125 0.222222222 8 0 0 9 X:16078036-16078074 6 10.5 3987 FBgn0028397 630.16 18.44 28.35666667 0.016662435 0.569414317 0.370283296 4 4 4 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 16093289 16093295 - X_16093289_16093295_- 0.801089722 0.801672649 0.801381186 0.000412173 CG42354 FBtr0299950|FBtr0299950|FBtr0299950|FBtr0310316|FBtr0310316|FBtr0310316|FBtr0299951|FBtr0299951|FBtr0299951|FBtr0310314|FBtr0310314|FBtr0310314|FBtr0310315|FBtr0310315|FBtr0310315|FBtr0299949|FBtr0299949|FBtr0299949 16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057 16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102 X - 16093272 16093305 3'utr CG42354 FlyBase G67989.1 TATATATATTTGTGATACCTATACTAATATTTTT 82 16093297 0.723195785 5 73 863 0.894736842 1.452297671 0 0.134146341 0.252631579 82 8 2 85 X:16093272-16093305 7 CG42354 FBtr0310316|FBtr0310316|FBtr0310316|FBtr0299950|FBtr0299950|FBtr0299950|FBtr0299949|FBtr0299949|FBtr0299949|FBtr0310315|FBtr0310315|FBtr0310315|FBtr0310314|FBtr0310314|FBtr0310314|FBtr0299951|FBtr0299951|FBtr0299951 16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057 16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 16093273 16093305 3'utr CG42354 FlyBase G51174.1 TATATATATTTGTGATACCTATACTAATATTTT 49 16093297 0.699319491 7 44 496 0.880597015 1.469822016 0 0.326530612 0.507462687 49 7 1 59 X:16093273-16093305 7 65.5 3988 FBgn0259700 906.0733333 39.32 60.44666667 0.072289954 1.665818922 1.083599868 2 2 2 0.15 dme-miR-276a-3p 7mer-A1 GTTCCTA X 16093917 16093923 - X_16093917_16093923_- 0.772761185 0.81942938 0.796095283 0.032999401 CG42354 FBtr0299950|FBtr0310316|FBtr0299951|FBtr0310314|FBtr0310315|FBtr0299949 16093057|16093057|16093057|16093057|16093057|16093057 16094102|16094102|16094102|16094102|16094102|16094102 X - 16093900 16094015 3'utr CG42354 FlyBase G67994.1 CGCAACAGAGGTCACATATACATATATACTTTAATCCCAAGATATACTTAAGGACAGAGTGTGCTAGTAAAGCGCACACCGAATTTGCGCTGGTTCCTAACTTATACATGTGTGTG 40 16093926 0.934980454 13 40 215 1 1.672097858 0.063829787 0.15 0.276595745 40 0 0 47 X:16093900-16094015 7 CG42354 FBtr0310316|FBtr0299950|FBtr0299949|FBtr0310315|FBtr0310314|FBtr0299951 16093057|16093057|16093057|16093057|16093057|16093057 16094102|16094102|16094102|16094102|16094102|16094102 GTTCCTA 7mer-A1 dme-miR-276a-3p X - 16093889 16093998 3'utr CG42354 FlyBase G51179.1 ATACATATATACTTTAATCCCAAGATATACTTAAGGACAGAGTGTGCTAGTAAAGCGCACACCGAATTTGCGCTGGTTCCTAACTTATACATGTGTGTGTTTGTAATATT 22 16093926 0.975771596 10 20 128 0.96875 1.491361694 0.15625 0.318181818 0.53125 22 1 0 31 X:16093889-16093998 7 11.5 3989 FBgn0259700 906.0733333 39.32 60.44666667 0.012692129 0.292472024 0.190250358 3 3 3 0.15 dme-bantam-3p 6mer3-8 TGATCT X 16277537 16277542 + X_16277537_16277542_+ 0.999527867 0.999999004 0.999763436 0.000333118 Prosalpha4 FBtr0074210 16277308 16277587 X + 16277487 16277553 3'utr Prosalpha4 FlyBase G61937.1 AATTACCACTTTCTATTCTTCGGAACCCTGTAAAACGGTATGAAAATATTTGATCTGTATAAAATAC 18 16277537 0.691296933 8 17 141 0.952380952 1.301029996 0.19047619 0.111111111 0.238095238 18 1 0 20 X:16277487-16277553 6 Prosalpha4 FBtr0074210 16277308 16277587 TGATCT 6mer3-8 dme-bantam-3p X + 16277523 16277551 3'utr Prosalpha4 FlyBase G46771.1 GGTATGAAAATATTTGATCTGTATAAAAT 6 16277536 0.720683801 2 5 51 0.9 0.954242509 0.1 0.5 0.7 6 1 0 9 X:16277523-16277551 6 8 3990 FBgn0004066 1281.22 133.8966667 204.6 0.006244049 0.059747567 0.039100684 0 1 0.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA X 16284201 16284208 + X_16284201_16284208_+ 0.674981473 0.674981883 0.674981678 2.83E-07 eas FBtr0308617|FBtr0343520|FBtr0308618 16283732|16283732|16283732 16285618|16285618|16285618 X + 16284146 16284226 3'utr eas FlyBase G61942.1 GGCGACCAAACCCATGCCGATGATTTGGAAGAAGACGCAGAGCTTTCTTGATTTAGTACCTGAACGTTTTAGTGATGCTGA 23 16284198 0.98959922 11 22 208 0.931034483 1.431363764 0.172413793 0.260869565 0.413793103 23 2 0 27 X:16284146-16284226 8 eas FBtr0308618|FBtr0343520|FBtr0308617 16283732|16283732|16283732 16285618|16285618|16285618 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" X + 16284156 16284225 3'utr eas FlyBase G46774.1 CCCATGCCGATGATTTGGAAGAAGACGCAGAGCTTTCTTGATTTAGTACCTGAACGTTTTAGTGATGCTG 9 16284198 0.989194274 7 8 75 0.857142857 1.079181246 0.357142857 0.444444444 0.642857143 9 2 0 12 X:16284156-16284225 8 13 3991 FBgn0000536 1202.386667 57.26666667 87.69666667 0.01081183 0.227008149 0.148238245 3 3 3 0.15 dme-bantam-3p 6mer3-8 TGATCT X 16284434 16284439 + X_16284434_16284439_+ 0.973502071 0.980170843 0.976836457 0.004715483 eas FBtr0308617|FBtr0343520|FBtr0308618 16283732|16283732|16283732 16285618|16285618|16285618 X + 16284374 16284475 3'utr eas FlyBase G61943.1 ACCTCGAGGCTCTGGACAGTCCGATTGTCTTCTCCCACAACGATCTTCTGCTGGGAAATGTGATCTATACGCAGAGCCTGAATACGGTGAACTTCATCGACT 17 16284440 0.977931239 7 15 104 0.894736842 1.230448921 0.315789474 0.117647059 0.210526316 17 2 0 17 X:16284374-16284475 6 eas FBtr0308618|FBtr0343520|FBtr0308617 16283732|16283732|16283732 16285618|16285618|16285618 TGATCT 6mer3-8 dme-bantam-3p X + 16284369 16284457 3'utr eas FlyBase G46775.1 TGAATACCTCGAGGCTCTGGACAGTCCGATTGTCTTCTCCCACAACGATCTTCTGCTGGGAAATGTGATCTATACGCAGAGCCTGAATA 20 16284440 0.953240683 9 17 96 0.892857143 1.096910013 0.25 0.368421053 0.571428571 19 2 1 25 X:16284369-16284457 6 11 3992 FBgn0000536 1202.386667 57.26666667 87.69666667 0.009148471 0.192083818 0.125432362 -6 -6 -6 0.15 dme-miR-318-3p 8mer-A1 CCCAGTGA X 16285152 16285159 + X_16285152_16285159_+ 0.634971124 0.667231088 0.651101106 0.022811265 eas FBtr0308617|FBtr0343519|FBtr0074212|FBtr0343520|FBtr0308618|FBtr0074214|FBtr0074211|FBtr0308619 16283732|16285102|16285102|16283732|16283732|16285102|16285102|16285102 16285618|16285618|16285618|16285618|16285618|16285618|16285618|16285618 X + 16285146 16285196 3'utr eas FlyBase G61945.1 TATGTGCCCAGTGATATATGTATAAACTAAGGCTGGAACGGGTCTCAATGT 22 16285169 0.765860597 6 14 135 0.615384615 0.903089987 0.423076923 0.090909091 0.230769231 22 9 1 16 X:16285146-16285196 8 eas FBtr0074211|FBtr0308619|FBtr0308618|FBtr0074214|FBtr0074212|FBtr0343520|FBtr0308617|FBtr0343519 16285102|16285102|16283732|16285102|16285102|16283732|16283732|16285102 16285618|16285618|16285618|16285618|16285618|16285618|16285618|16285618 CCCAGTGA 8mer-A1 dme-miR-318-3p X + 16285144 16285206 3'utr eas FlyBase G46777.1 ATTATGTGCCCAGTGATATATGTATAAACTAAGGCTGGAACGGGTCTCAATGTTATACATATG 19 16285172 0.811143602 8 16 106 0.827586207 0.77815125 0.551724138 0.473684211 0.655172414 19 2 3 24 X:16285144-16285206 8 7 3993 FBgn0000536 1202.386667 57.26666667 87.69666667 0.005821755 0.122235157 0.079820594 -17 -20 -18.5 0.15 dme-miR-965-3p 7mer-m8 TACGCTT X 16293262 16293268 + X_16293262_16293268_+ 0.616066044 0.619704709 0.617885377 0.002572949 caz FBtr0334992|FBtr0334990|FBtr0334991|FBtr0074217 16292078|16293194|16293194|16293194 16293520|16293520|16293520|16293520 X + 16293162 16293336 stop_codon caz FlyBase G61967.1 AAACGATGGAGGCATGCGCTCGAGACCATATTAAGCGCATGGTAGCCAGCCGAACGCGGCACCTATTTTTTTCACTTTTACTTATTAATTGTAGCGAGAGTACGCTTTTAAATGTACTTTTAAAATTAACAGTCAGAGCAACTTTTAAATGATAATTGCCAGCACACGACTTCAT 71 16293269 0.985598263 25 68 552 0.966292135 1.633468456 0.337078652 0.183098592 0.348314607 71 2 1 86 X:16293162-16293336 7 caz FBtr0334991|FBtr0074217|FBtr0334992|FBtr0334990 16293194|16293194|16292078|16293194 16293520|16293520|16293520|16293520 TACGCTT 7mer-m8 dme-miR-965-3p X + 16293228 16293309 3'utr caz FlyBase G46789.1 TTTTTTCACTTTTACTTATTAATTGTAGCGAGAGTACGCTTTTAAATGTACTTTTAAAATTAACAGTCAGAGCAACTTTTAA 42 16293269 0.985810615 13 41 341 0.983870968 1.785329835 0.290322581 0.404761905 0.596774194 42 1 0 61 X:16293228-16293309 7 38 3994 FBgn0011571 288.6766667 20.94333333 31.84666667 0.131635163 1.814419863 1.193217501 -7 -7 -7 0.15 dme-miR-1012-3p 6mer3-8 TTGACT X 16293381 16293386 + X_16293381_16293386_+ 0.990187928 0.988354953 0.989271441 0.001296056 caz FBtr0334992|FBtr0334990|FBtr0334991|FBtr0074217 16292078|16293194|16293194|16293194 16293520|16293520|16293520|16293520 X + 16293365 16293492 3'utr caz FlyBase G61968.1 ACGGTTATCGCTCGTTTTGACTGAATTATATTATATAATTATGTAATCTAATTTAACAACTGTAACTGTAACATGGTACATACGAATAAACATATATATATGTATACATATATAGCTCATATATATGT 37 16293381 0.907989108 18 33 335 0.857142857 1.322219295 0.06122449 0.243243243 0.428571429 37 6 1 42 X:16293365-16293492 6 caz FBtr0334991|FBtr0074217|FBtr0334992|FBtr0334990 16293194|16293194|16292078|16293194 16293520|16293520|16293520|16293520 TTGACT 6mer3-8 dme-miR-1012-3p X + 16293360 16293492 3'utr caz FlyBase G46790.1 CACACACGGTTATCGCTCGTTTTGACTGAATTATATTATATAATTATGTAATCTAATTTAACAACTGTAACTGTAACATGGTACATACGAATAAACATATATATATGTATACATATATAGCTCATATATATGT 32 16293381 0.770261156 16 28 320 0.905660377 1.681241237 0 0.40625 0.641509434 32 5 0 48 X:16293360-16293492 6 20.5 3995 FBgn0011571 288.6766667 20.94333333 31.84666667 0.071013706 0.978831768 0.643709441 0 0 0 0.15 dme-miR-318-3p 6mer3-8 CCCAGT X 16302979 16302984 + X_16302979_16302984_+ 0.999814412 0.999844571 0.999829491 2.14E-05 CG3632 FBtr0344216 16302932 16303308 X + 16302969 16303007 3'utr CG3632 FlyBase G61999.1 AGCTTTTTAACCCAGTTAGGCTATGTGGATCCTGCTACA 11 16302985 0.763209204 4 11 92 1 1.079181246 0.166666667 0.090909091 0.166666667 11 0 0 12 X:16302969-16303007 6 CG3632 FBtr0344216 16302932 16303308 CCCAGT 6mer3-8 dme-miR-318-3p X + 16302960 16303005 3'utr CG3632 FlyBase G46814.1 CAAACGAAAAGCTTTTTAACCCAGTTAGGCTATGTGGATCCTGCTA 9 16302993 0.974970901 5 9 60 1 1.079181246 0 0.222222222 0.416666667 9 0 0 12 X:16302960-16303005 6 9 3996 FBgn0030735 647.8533333 19.21 29.39333333 0.013892033 0.468505986 0.30619188 -6 -14 -10 0.15 dme-miR-7-5p 6mer3-8 GTCTTC X 16303078 16303083 + X_16303078_16303083_+ 0.999902805 0.999878971 0.999890888 1.68E-05 CG3632 FBtr0344216 16302932 16303308 X + 16303059 16303096 stop_codon CG3632 FlyBase G62000.1 AGGCGAAGGACGATGAGACGTCTTCTGCGATTTCCTAA 43 16303082 0.93661744 5 42 285 0.980769231 1.707570176 0 0.209302326 0.346153846 43 1 0 51 X:16303059-16303096 6 CG3632 FBtr0344216 16302932 16303308 GTCTTC 6mer3-8 dme-miR-7-5p X + 16303028 16303094 stop_codon CG3632 FlyBase G46815.1 CAGGAGTACGCTGCGGTACCTGCAGAATCCCAGGCGAAGGACGATGAGACGTCTTCTGCGATTTCCT 14 16303082 0.977404326 4 14 90 1 1.414973348 0.153846154 0.571428571 0.769230769 14 0 0 26 X:16303028-16303094 6 27 3997 FBgn0030735 647.8533333 19.21 29.39333333 0.0416761 1.405517959 0.918575641 -4 -4 -4 0.15 dme-miR-965-3p 6mer3-8 TACGCT X 16317729 16317734 - X_16317729_16317734_- 0.457747543 0.986952187 0.722349865 0.374204232 Cyp1 FBtr0074238 16317671 16318181 X - 16317690 16317740 3'utr Cyp1 FlyBase G68037.1 ACGTTCTACGCTATGTACCGGAATCGGAATTGTATTTTCGTCTTAATAAAT 20 16317727 0.79133648 6 19 154 0.96 1.380211242 0.16 0.25 0.4 20 1 0 24 X:16317690-16317740 6 Cyp1 FBtr0074238 16317671 16318181 TACGCT 6mer3-8 dme-miR-965-3p X - 16317699 16317741 3'utr Cyp1 FlyBase G51207.1 AACGTTCTACGCTATGTACCGGAATCGGAATTGTATTTTCGTC 7 16317727 0.961598982 4 6 47 0.875 0.84509804 0.25 0.142857143 0.25 7 1 0 7 X:16317699-16317741 6 9.5 3998 FBgn0004432 7157.433333 716.86 1097.683333 0.001327291 0.013252239 0.008654591 -7 -7 -7 0.15 dme-bantam-3p 6mer3-8 TGATCT X 16317820 16317825 - X_16317820_16317825_- 0.997999432 0.999819079 0.998909255 0.001286722 Cyp1 FBtr0074238 16317671 16318181 X - 16317798 16317874 3'utr Cyp1 FlyBase G68038.1 AAGAAAAACAATGAGACGACAAGAGTCGAGAGGGGCTTAGAAAAATGTTTGATCTTTTGATGTTGGCTTACTTACTA 37 16317826 0.999985575 10 36 351 0.978723404 1.662757832 0.14893617 0.243243243 0.404255319 37 1 0 46 X:16317798-16317874 6 Cyp1 FBtr0074238 16317671 16318181 TGATCT 6mer3-8 dme-bantam-3p X - 16317802 16317876 3'utr Cyp1 FlyBase G51208.1 AGAAGAAAAACAATGAGACGACAAGAGTCGAGAGGGGCTTAGAAAAATGTTTGATCTTTTGATGTTGGCTTACTT 29 16317819 0.987721101 9 27 250 0.934782609 1.156347201 0.239130435 0.379310345 0.608695652 29 1 2 43 X:16317802-16317876 6 27 3999 FBgn0004432 7157.433333 716.86 1097.683333 0.003772302 0.037664258 0.024597258 1 -6 -2.5 0.15 dme-miR-277-3p 7mer-m8 TGCATTT X 16318110 16318116 - X_16318110_16318116_- 0.620149284 0.620204247 0.620176766 3.88E-05 Cyp1 FBtr0074238 16317671 16318181 X - 16318100 16318162 3'utr Cyp1 FlyBase G68041.1 AACAGCAACATTGCAAGAAGAAAAATCTGTTAAGACGAAAACCATTTGCATTTTCTCCAAAAC 26 16318117 0.850893062 8 24 139 0.9375 1.477121255 0.125 0.192307692 0.34375 26 2 0 30 X:16318100-16318162 7 Cyp1 FBtr0074238 16317671 16318181 TGCATTT 7mer-m8 dme-miR-277-3p X - 16318100 16318159 3'utr Cyp1 FlyBase G51210.1 AGCAACATTGCAAGAAGAAAAATCTGTTAAGACGAAAACCATTTGCATTTTCTCCAAAAC 19 16318116 0.80387963 8 18 109 0.958333333 1.361727836 0.041666667 0.263157895 0.416666667 19 1 0 23 X:16318100-16318159 7 15 4000 FBgn0004432 7157.433333 716.86 1097.683333 0.002095723 0.020924588 0.013665143 1 0 0.5 0.15 dme-miR-184-5p 6mer3-8 TGATAA X 16321441 16321446 - X_16321441_16321446_- 0.994909425 0.999520714 0.997215069 0.003260682 CG9917 FBtr0331756|FBtr0074237 16321429|16321429 16322047|16322047 X - 16321430 16321464 3'utr CG9917 FlyBase G68047.1 ATTATTGTAATAATAAAGTGATAAATGTAAAAAGA 20 16321452 0.759737074 6 17 145 0.869565217 1 0.043478261 0.15 0.260869565 20 2 1 20 X:16321430-16321464 6 CG9917 FBtr0331756|FBtr0074237 16321429|16321429 16322047|16322047 TGATAA 6mer3-8 dme-miR-184-5p X - 16321433 16321462 3'utr CG9917 FlyBase G51218.1 TATTGTAATAATAAAGTGATAAATGTAAAA 14 16321452 0.713158982 7 13 87 0.952380952 1.301029996 0 0.357142857 0.571428571 14 1 0 20 X:16321433-16321462 6 16 4001 FBgn0030740 1612.983333 110.1633333 169.58 0.009919507 0.145238888 0.094350749 6 6 6 0.15 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT X 16321797 16321803 - X_16321797_16321803_- 0.620173121 0.620202849 0.620187985 2.10E-05 CG9917 FBtr0331756|FBtr0074237 16321429|16321429 16322047|16322047 X - 16321741 16321830 3'utr CG9917 FlyBase G68048.3 AGGCTAGCCAGCCATATCGTTTTTGTTTGGTGCTTCTAATTTATGTAATTAATTGCCAATTGATGTATGTATGTATGTAGTATTGTAAAC 48 16321804 0.81168328 13 47 592 1 1.770852012 0.169491525 0.166666667 0.322033898 48 0 0 59 X:16321741-16321830 7 CG9917 FBtr0331756|FBtr0074237 16321429|16321429 16322047|16322047 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" X - 16321655 16321831 3'utr CG9917 FlyBase G51220.1 CAGGCTAGCCAGCCATATCGTTTTTGTTTGGTGCTTCTAATTTATGTAATTAATTGCCAATTGATGTATGTATGTATGTAGTATTGTAAACAATGCTTATACTTCCTTCTAGTTTTACTTCTGAATCAGAAATTCTTCTGGCCTTTGTCATGCGTTTATCTAATGCTTTATTTCCGT 49 16321804 0.994765471 14 43 591 0.926470588 1.799340549 0.235294118 0.285714286 0.485294118 49 5 0 63 X:16321655-16321831 7 35.5 4002 FBgn0030740 1612.983333 110.1633333 169.58 0.022008907 0.322248782 0.209340724 1 1 1 0.15 dme-miR-965-3p 6mer2-7 ACGCTT X 16321984 16321989 - X_16321984_16321989_- 0.785915962 0.486494642 0.636205302 0.211722902 CG9917 FBtr0331756|FBtr0074237 16321429|16321429 16322047|16322047 X - 16321963 16322023 3'utr CG9917 FlyBase G68050.1 TATCTCGAATCCGAATCTGTAAAACGCCTTCTCAACGCTTTGACTTTGGCATTCCAAAGCG 12 16321984 0.979003954 7 11 79 0.928571429 1.113943352 0.142857143 0.166666667 0.285714286 12 1 0 13 X:16321963-16322023 6 CG9917 FBtr0331756|FBtr0074237 16321429|16321429 16322047|16322047 ACGCTT 6mer2-7 dme-miR-965-3p X - 16321962 16322001 3'utr CG9917 FlyBase G51222.1 AACGCCTTCTCAACGCTTTGACTTTGGCATTCCAAAGCGA 10 16321982 0.711417124 5 10 73 1 1.146128036 0.285714286 0.4 0.571428571 10 0 0 14 X:16321962-16322001 6 9 4003 FBgn0030740 1612.983333 110.1633333 169.58 0.005579723 0.081696874 0.053072296 -5 -7 -6 0.15 dme-miR-2a-2-5p 6mer3-8 TGATGA X 16328165 16328170 + X_16328165_16328170_+ 0.727384977 0.725154968 0.726269973 0.001576848 CalpC FBtr0074226 16328052 16328523 X + 16328136 16328187 3'utr CalpC FlyBase G62011.1 GACGACGACGACGATGATGCAGCTGATGTTGATGATGCTGATCTGCCAATCA 20 16328168 0.97514666 4 20 132 1 1.322219295 0.238095238 0.05 0.095238095 20 0 0 21 X:16328136-16328187 6 CalpC FBtr0074226 16328052 16328523 TGATGA 6mer3-8 dme-miR-2a-2-5p X + 16328136 16328191 3'utr CalpC FlyBase G46826.1 GACGACGACGACGATGATGCAGCTGATGTTGATGATGCTGATCTGCCAATCAAAAA 15 16328169 0.974332217 4 14 89 0.947368421 1.255272505 0.263157895 0.266666667 0.421052632 15 1 0 18 X:16328136-16328191 6 12.5 4004 FBgn0260450 208 9.383333333 14.38333333 0.060096154 1.332149201 0.869061414 -3 -4 -3.5 0.15 dme-miR-968-5p 6mer3-8 ACTACT X 16328437 16328442 + X_16328437_16328442_+ 0.881679799 0.895830203 0.888755001 0.010005844 CalpC FBtr0074226 16328052 16328523 X + 16328386 16328450 3'utr CalpC FlyBase G62012.1 AATATATATAGAATCGAGCGAAATGGCCAATGCGATTGCAGACTTTTATGTACTACTGAGAATTT 130 16328434 0.985219418 7 130 1056 1 2.190331698 0.458064516 0.161538462 0.296774194 130 0 0 155 X:16328386-16328450 6 CalpC FBtr0074226 16328052 16328523 ACTACT 6mer3-8 dme-miR-968-5p X + 16328414 16328457 3'utr CalpC FlyBase G46827.1 AATGCGATTGCAGACTTTTATGTACTACTGAGAATTTTTATTAT 85 16328434 0.698210974 4 85 675 1 2.127104798 0.485074627 0.435294118 0.641791045 85 0 0 134 X:16328414-16328457 6 106.5 4005 FBgn0260450 208 9.383333333 14.38333333 0.512019231 11.34991119 7.404403244 3 3 3 0.15 dme-miR-12-5p 7mer-m8 AATACTC X 16337819 16337825 + X_16337819_16337825_+ 0.67450398 0.674418219 0.674461099 6.07E-05 Dsp1 FBtr0089259|FBtr0289960|FBtr0089263|FBtr0339766|FBtr0089261|FBtr0089262|FBtr0089260 16337806|16337806|16337806|16337806|16337806|16337806|16337806 16340443|16338771|16340624|16338884|16340443|16338771|16340443 X + 16337768 16337894 stop_codon Dsp1 FlyBase G62025.1 CGACGACGACGGCGATGGAGATGATGACGAGAACCAATAGGTTTAGCAGTAAATACTCTTCACTATTTATACACACGATCGTTGTCGCGATGGAGGAAAGAAACATGATAACGTTGGTTGATCTATT 51 16337821 0.977751035 17 46 313 0.915254237 1.431363764 0.220338983 0.137254902 0.254237288 51 4 1 54 X:16337768-16337894 7 Dsp1 FBtr0089261|FBtr0089262|FBtr0089260|FBtr0089259|FBtr0289960|FBtr0089263|FBtr0339766 16337806|16337806|16337806|16337806|16337806|16337806|16337806 16340443|16338771|16340443|16340443|16338771|16340624|16338884 AATACTC 7mer-m8 dme-miR-12-5p X + 16337765 16337894 stop_codon Dsp1 FlyBase G46837.1 CGACGACGACGACGGCGATGGAGATGATGACGAGAACCAATAGGTTTAGCAGTAAATACTCTTCACTATTTATACACACGATCGTTGTCGCGATGGAGGAAAGAAACATGATAACGTTGGTTGATCTATT 23 16337821 0.974605725 10 22 138 0.947368421 1.556302501 0.131578947 0.52173913 0.710526316 23 2 0 36 X:16337765-16337894 7 13.5 4006 FBgn0011764 2716.763333 96.47 148.13 0.004969148 0.139939878 0.091136164 -2 -2 -2 0.15 dme-miR-305-3p 6mer2-7 TGTGCC X 16337942 16337947 + X_16337942_16337947_+ 0.999984977 0.999999995 0.999992486 1.06E-05 Dsp1 FBtr0089259|FBtr0289960|FBtr0089263|FBtr0339766|FBtr0089261|FBtr0089262|FBtr0089260 16337806|16337806|16337806|16337806|16337806|16337806|16337806 16340443|16338771|16340624|16338884|16340443|16338771|16340443 X + 16337935 16337973 5'utr Dsp1 FlyBase G62026.1 ATAAGGGTGTGCCCGCTTTAGAGGTTTCGCTTTCCGGTA 11 16337951 0.881112217 3 9 110 0.857142857 1.079181246 0 0.272727273 0.428571429 11 2 0 12 X:16337935-16337973 6 Dsp1 FBtr0089261|FBtr0089262|FBtr0089260|FBtr0089259|FBtr0289960|FBtr0089263|FBtr0339766 16337806|16337806|16337806|16337806|16337806|16337806|16337806 16340443|16338771|16340443|16340443|16338771|16340624|16338884 TGTGCC 6mer2-7 dme-miR-305-3p X + 16337895 16337973 5'utr Dsp1 FlyBase G46838.1 ATCAGGTTGGCCAATGTGTGTTGAATATAAATTTATATATATAAGGGTGTGCCCGCTTTAGAGGTTTCGCTTTCCGGTA 10 16337950 0.992114475 6 8 94 0.785714286 0.740362689 0.428571429 0.3 0.5 10 2 1 11 X:16337895-16337973 6 6.5 4007 FBgn0011764 2716.763333 96.47 148.13 0.002392553 0.06737846 0.043880375 -9 -8 -8.5 0.15 dme-miR-276a-3p 7mer-A1 GTTCCTA X 16338315 16338321 + X_16338315_16338321_+ 0.822533162 0.82277718 0.822655171 0.000172534 Dsp1 FBtr0089259|FBtr0289960|FBtr0089263|FBtr0339766|FBtr0089261|FBtr0089262|FBtr0089260 16337806|16337806|16337806|16337806|16337806|16337806|16337806 16340443|16338771|16340624|16338884|16340443|16338771|16340443 X + 16338295 16338326 5'utr Dsp1 FlyBase G62027.1 CGAAGAGAAGAGAAACCATTGTTCCTAGTGCA 22 16338314 0.961808214 4 22 109 1 1.397940009 0.48 0.136363636 0.24 22 0 0 25 X:16338295-16338326 7 Dsp1 FBtr0089261|FBtr0089262|FBtr0089260|FBtr0089259|FBtr0289960|FBtr0089263|FBtr0339766 16337806|16337806|16337806|16337806|16337806|16337806|16337806 16340443|16338771|16340443|16340443|16338771|16340624|16338884 GTTCCTA 7mer-A1 dme-miR-276a-3p X + 16338296 16338334 5'utr Dsp1 FlyBase G46839.1 GAAGAGAAGAGAAACCATTGTTCCTAGTGCATTTCGAAA 9 16338313 0.963563413 3 9 48 1 1.113943352 0.307692308 0.444444444 0.615384615 9 0 0 13 X:16338296-16338334 7 15.5 4008 FBgn0011764 2716.763333 96.47 148.13 0.005705318 0.160671711 0.104637818 1 2 1.5 0.15 dme-miR-2a-2-5p 7mer-A1 GATGAGA X 16339340 16339346 + X_16339340_16339346_+ 0.782835437 0.782851627 0.782843532 1.15E-05 Dsp1 FBtr0089259|FBtr0089263|FBtr0089261|FBtr0089260 16337806|16337806|16337806|16337806 16340443|16340624|16340443|16340443 X + 16339190 16339521 3'utr Dsp1 FlyBase G62031.1 AGCCACGATCATAAGATACGGAAAGTTAGTCTTGGTTGGTTCGGTGCGCTTCGTGATGAGGTGGGAAGCAACCGCAACGCTGTCGTCGGACATTGCAACAATTGTTGTTGACTTGGCTGGCCATGTATATACTATTTGAAGTATTATTTAGATGAGACTACGTAGAAATTAACAAGAATCGAGAGCAAATAACGACATCATACAAGCCTAATATTAGAGTAGATTTCAGCGGGCCTGCAAAGTAATGTAAATTGCGTAGAAACCTTGAATATATTGTAGACTAGTTTTTTGAGGACTAGTATTGCCCAAAATGTTCCAGGCACAGAAACAGA 333 16339342 0.980574246 46 322 2376 0.971279373 2.57054294 0.224543081 0.138138138 0.250652742 333 11 0 372 X:16339190-16339521 7 Dsp1 FBtr0089261|FBtr0089260|FBtr0089259|FBtr0089263 16337806|16337806|16337806|16337806 16340443|16340443|16340443|16340624 GATGAGA 7mer-A1 dme-miR-2a-2-5p X + 16339276 16339442 3'utr Dsp1 FlyBase G46848.1 CGGACATTGCAACAATTGTTGTTGACTTGGCTGGCCATGTATATACTATTTGAAGTATTATTTAGATGAGACTACGTAGAAATTAACAAGAATCGAGAGCAAATAACGACATCATACAAGCCTAATATTAGAGTAGATTTCAGCGGGCCTGCAAAGTAATGTAAATT 167 16339342 0.978834893 22 159 1207 0.953846154 2.394451681 0.207692308 0.407185629 0.619230769 167 12 0 248 X:16339276-16339442 7 182.5 4009 FBgn0011764 2716.763333 96.47 148.13 0.067175524 1.891779828 1.232025923 -2 -2 -2 0.15 dme-miR-278-3p 7mer-A1 CCACCGA X 16339913 16339919 + X_16339913_16339919_+ 0.665721077 0.81250975 0.739115414 0.103795285 Dsp1 FBtr0089259|FBtr0089263|FBtr0089261|FBtr0089260 16337806|16337806|16337806|16337806 16340443|16340624|16340443|16340443 X + 16339870 16339952 3'utr Dsp1 FlyBase G62034.1 TACATATATATTTTTTAGCATGATTTTGATAGAGAATAACTCGCCACCGAGATTATATTCATAGAAGTGTGTCTAGGTTAAAC 77 16339922 0.847999238 19 75 569 0.966292135 1.33243846 0.269662921 0.142857143 0.258426966 77 0 3 86 X:16339870-16339952 7 Dsp1 FBtr0089261|FBtr0089260|FBtr0089259|FBtr0089263 16337806|16337806|16337806|16337806 16340443|16340443|16340443|16340624 CCACCGA 7mer-A1 dme-miR-278-3p X + 16339877 16339945 3'utr Dsp1 FlyBase G46851.1 ATATTTTTTAGCATGATTTTGATAGAGAATAACTCGCCACCGAGATTATATTCATAGAAGTGTGTCTAG 31 16339923 0.784384777 8 28 210 0.869565217 1.602059991 0.239130435 0.387096774 0.586956522 31 6 0 40 X:16339877-16339945 7 43 4010 FBgn0011764 2716.763333 96.47 148.13 0.015827658 0.445734425 0.29028556 -9 -10 -9.5 0.15 dme-miR-276a-3p 6mer3-8 AGTTCC X 16340026 16340031 + X_16340026_16340031_+ 0.99588264 0.999999999 0.99794132 0.002911441 Dsp1 FBtr0089259|FBtr0089263|FBtr0089261|FBtr0089260 16337806|16337806|16337806|16337806 16340443|16340624|16340443|16340443 X + 16339970 16340096 3'utr Dsp1 FlyBase G62034.2 CTACAATTCGACGGTAATCCATCCCCTCTATATTAATAAATTACTATGAAAATTCCAGTTCCCTGTGCGCTTTGTTATAAGAACTAAACTATTATGAAATAAACTTTTAGAAATGAGATTCTTATTA 116 16340034 0.79397151 22 112 924 0.973856209 1.696065014 0.052287582 0.25862069 0.437908497 116 2 2 149 X:16339970-16340096 6 Dsp1 FBtr0089261|FBtr0089260|FBtr0089259|FBtr0089263 16337806|16337806|16337806|16337806 16340443|16340443|16340443|16340624 AGTTCC 6mer3-8 dme-miR-276a-3p X + 16340012 16340059 3'utr Dsp1 FlyBase G46853.1 ACTATGAAAATTCCAGTTCCCTGTGCGCTTTGTTATAAGAACTAAACT 64 16340042 0.601572389 7 59 519 0.942307692 1.514104821 0.115384615 0.46875 0.673076923 64 4 2 98 X:16340012-16340059 6 71 4011 FBgn0011764 2716.763333 96.47 148.13 0.026134039 0.735980097 0.479308715 -8 -16 -12 0.15 dme-miR-965-3p 7mer-m8 TACGCTT X 16340176 16340182 + X_16340176_16340182_+ 0.619777964 0.619915284 0.619846624 9.71E-05 Dsp1 FBtr0089259|FBtr0089263|FBtr0089261|FBtr0089260 16337806|16337806|16337806|16337806 16340443|16340624|16340443|16340443 X + 16340121 16340198 3'utr Dsp1 FlyBase G62035.1 GATGATGAATGATGTGTTCTTCAAAACCATTTGTCTTAAATCTTAATTTTTGATTTACGCTTGGTACATACGTAATAG 10 16340175 0.985029416 5 10 100 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 X:16340121-16340198 7 Dsp1 FBtr0089261|FBtr0089260|FBtr0089259|FBtr0089263 16337806|16337806|16337806|16337806 16340443|16340443|16340443|16340624 TACGCTT 7mer-m8 dme-miR-965-3p X + 16340165 16340196 3'utr Dsp1 FlyBase G46855.1 AATTTTTGATTTACGCTTGGTACATACGTAAT 8 16340175 0.775072616 4 7 63 0.75 0.954242509 0 0.375 0.583333333 8 3 0 9 X:16340165-16340196 7 7.5 4012 FBgn0011764 2716.763333 96.47 148.13 0.002760638 0.077744376 0.050631202 1 1 1 0.15 dme-miR-79-3p 7mer-m8 TAGCTTT X 16340244 16340250 + X_16340244_16340250_+ 0.619422241 0.61207287 0.615747556 0.00519674 Dsp1 FBtr0089259|FBtr0089263|FBtr0089261|FBtr0089260 16337806|16337806|16337806|16337806 16340443|16340624|16340443|16340443 X + 16340212 16340273 3'utr Dsp1 FlyBase G62036.1 ATGTTGTTACAAATCCCAATAATGAACAGCTTTAGCTTTTATATTTGATAGACAACAACACT 35 16340243 0.982887649 6 32 332 0.921052632 1.544068044 0.105263158 0.085714286 0.157894737 35 3 0 35 X:16340212-16340273 7 Dsp1 FBtr0089261|FBtr0089260|FBtr0089259|FBtr0089263 16337806|16337806|16337806|16337806 16340443|16340443|16340443|16340624 TAGCTTT 7mer-m8 dme-miR-79-3p X + 16340212 16340265 3'utr Dsp1 FlyBase G46856.1 ATGTTGTTACAAATCCCAATAATGAACAGCTTTAGCTTTTATATTTGATAGACA 19 16340243 0.758336317 5 18 174 0.964285714 1.431363764 0 0.368421053 0.571428571 19 1 0 27 X:16340212-16340265 7 25 4013 FBgn0011764 2716.763333 96.47 148.13 0.009202127 0.259147922 0.168770674 1 1 1 0.15 dme-miR-13b-2-5p 7mer-m8 TTTGACG X 16367055 16367061 + X_16367055_16367061_+ 0.63167426 0.638953466 0.635313863 0.005147172 nonA FBtr0340313|FBtr0074232|FBtr0100586 16367010|16367010|16365743 16371525|16368526|16368526 X + 16367036 16367074 5'utr nonA FlyBase G62065.1 CATACATATAAGGATGAGATTTGACGTACTCTCAAATAT 15 16367056 0.694216999 4 15 94 1 1.301029996 0.05 0.333333333 0.5 15 0 0 20 X:16367036-16367074 7 nonA FBtr0340313|FBtr0074232|FBtr0100586 16367010|16367010|16365743 16371525|16368526|16368526 TTTGACG 7mer-m8 dme-miR-13b-2-5p X + 16367000 16367072 stop_codon nonA FlyBase G46876.1 CGACGTTTTTAGACACTGGATCGATCGAACAATATACATACATATAAGGATGAGATTTGACGTACTCTCAAAT 8 16367056 0.969108838 6 8 44 1 1.041392685 0.181818182 0.375 0.545454545 8 0 0 11 X:16367000-16367072 7 10 4014 FBgn0004227 554.3866667 22.83 35.39333333 0.018037952 0.438020149 0.282539085 -1 -1 -1 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT X 16378190 16378196 + X_16378190_16378196_+ 0.658918455 0.65268133 0.655799893 0.004410366 Fur2 FBtr0301300 16377374 16381545 X + 16378168 16378202 3'utr Fur2 FlyBase G62083.1 CAGCCGGGCATCCTGTCCAAGTGGCAGCTGATATT 7 16378189 0.822002147 4 7 32 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 X:16378168-16378202 7 Fur2 FBtr0301300 16377374 16381545 GGCAGCT 7mer-m8 dme-miR-980-3p X + 16378165 16378201 3'utr Fur2 FlyBase G46886.1 AATCAGCCGGGCATCCTGTCCAAGTGGCAGCTGATAT 5 16378189 0.955258602 2 5 23 1 0.954242509 0 0.6 0.777777778 5 0 0 9 X:16378165-16378201 7 5.5 4015 FBgn0004598 1868.423333 38.93666667 59.46333333 0.002943658 0.14125503 0.092493974 1 1 1 0.15 dme-bantam-3p 6mer2-7 GATCTC X 16378849 16378854 + X_16378849_16378854_+ 0.998998408 0.998986238 0.998992323 8.63E-06 Fur2 FBtr0301300 16377374 16381545 X + 16378762 16378892 3'utr Fur2 FlyBase G62085.1 TGGCCCTGTCACGACACCTGCGAAACGTGCGCCGGTGCCGGACCCGACAGCTGCCTCACATGTGCTCCGGCCCACCTGCACGTCATCGATCTCGCCGTCTGCCTGCAATTCTGCCCGGACGGATATTTTGA 110 16378847 0.970546132 15 105 603 0.959349593 2.071882007 0.284552846 0.109090909 0.203252033 110 5 0 118 X:16378762-16378892 6 Fur2 FBtr0301300 16377374 16381545 GATCTC 6mer2-7 dme-bantam-3p X + 16378809 16378891 3'utr Fur2 FlyBase G46888.1 CAGCTGCCTCACATGTGCTCCGGCCCACCTGCACGTCATCGATCTCGCCGTCTGCCTGCAATTCTGCCCGGACGGATATTTTG 56 16378846 0.943741831 12 53 310 0.946808511 1.949390007 0.393617021 0.392857143 0.638297872 56 5 0 89 X:16378809-16378891 6 64.5 4016 FBgn0004598 1868.423333 38.93666667 59.46333333 0.034521085 1.656536255 1.084702057 2 3 2.5 0.15 dme-miR-1008-3p 8mer-A1 AGCTGTGA X 16379038 16379045 + X_16379038_16379045_+ 0.607513153 0.511599764 0.559556458 0.067821016 Fur2 FBtr0301300 16377374 16381545 X + 16378985 16379052 3'utr Fur2 FlyBase G62086.1 TTCCCTGCGAGCCCAACTGTGCCTCATGCCAGGACCATCCCGAGTACTGCACTAGCTGTGATCACCAT 15 16379037 0.966416038 7 13 70 0.933333333 0.84509804 0 0 0 15 0 1 14 X:16378985-16379052 8 Fur2 FBtr0301300 16377374 16381545 AGCTGTGA 8mer-A1 dme-miR-1008-3p X + 16379021 16379058 3'utr Fur2 FlyBase G46889.1 ATCCCGAGTACTGCACTAGCTGTGATCACCATTTGGTT 14 16379037 0.781898946 6 14 90 1 1.301029996 0.1 0.428571429 0.6 14 0 0 20 X:16379021-16379058 8 12.5 4017 FBgn0004598 1868.423333 38.93666667 59.46333333 0.006690133 0.321034158 0.210213577 1 1 1 0.15 dme-miR-184-5p 6mer3-8 TGATAA X 16380973 16380978 + X_16380973_16380978_+ 0.999999987 0.979844485 0.989922236 0.014252091 Fur2 FBtr0301300 16377374 16381545 X + 16380943 16381015 3'utr Fur2 FlyBase G62093.1 TAACATTGGCGAGGACGATGATACAGATGGTGATAATTCCGATGACGAGTTGGACGGCAACGTGGGCACAGAT 29 16380970 0.703454166 9 24 148 0.794117647 1.431363764 0.205882353 0.178571429 0.323529412 28 7 0 27 X:16380943-16381015 6 Fur2 FBtr0301300 16377374 16381545 TGATAA 6mer3-8 dme-miR-184-5p X + 16380942 16380990 3'utr Fur2 FlyBase G46892.1 TTAACATTGGCGAGGACGATGATACAGATGGTGATAATTCCGATGACGA 9 16380970 0.740560533 4 7 50 0.818181818 0.653212514 0.272727273 0.111111111 0.272727273 9 1 1 9 X:16380942-16380990 6 12.5 4018 FBgn0004598 1868.423333 38.93666667 59.46333333 0.006690133 0.321034158 0.210213577 3 3 3 0.15 dme-miR-8-3p 7mer-A1 AGTATTA X 16382126 16382132 - X_16382126_16382132_- 0.544350687 0.816840197 0.680595442 0.192679173 CG9992 FBtr0074309|FBtr0074310|FBtr0074307|FBtr0074306|FBtr0074308 16381952|16381952|16381952|16381952|16381952 16382257|16382257|16382257|16382257|16382257 X - 16382091 16382181 3'utr CG9992 FlyBase G68076.1 GATTTTGTATACTTAGCGTACGCAGCTAAATAGGACAGAAGAAGACATAAGTATTAACGAATTTCTAATGATTTACAAGGAAAAACTAACA 17 16382151 0.862998463 8 14 90 0.777777778 0.669006781 0.111111111 0.058823529 0.111111111 17 2 2 14 X:16382091-16382181 7 CG9992 FBtr0074306|FBtr0074308|FBtr0074310|FBtr0074307|FBtr0074309 16381952|16381952|16381952|16381952|16381952 16382257|16382257|16382257|16382257|16382257 AGTATTA 7mer-A1 dme-miR-8-3p X - 16382103 16382173 3'utr CG9992 FlyBase G51244.1 ATACTTAGCGTACGCAGCTAAATAGGACAGAAGAAGACATAAGTATTAACGAATTTCTAATGATTTACAAG 14 16382134 0.967241802 6 11 67 0.894736842 0.929418926 0.105263158 0.214285714 0.421052632 14 1 1 17 X:16382103-16382173 7 8 4019 FBgn0030744 1109.82 99.53333333 152.75 0.007208376 0.080375084 0.052373159 19 2 10.5 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA X 16388000 16388007 + X_16388000_16388007_+ 0.500103818 0.500120135 0.500111976 1.15E-05 CG4239 FBtr0340314|FBtr0074268|FBtr0074270|FBtr0074269 16387959|16387959|16387959|16387959 16388702|16388702|16388702|16388702 X + 16387950 16388035 stop_codon CG4239 FlyBase G62102.1 AGAGCAACTAAAACTATTTGTAGTCAGCCCCATCTTCCCCCGGACAAATAGTACTTAACGCTGCCAGCCAAAGCTAACGCCTAAAA 39 16387998 0.958284295 8 35 168 0.925 1.568201724 0.15 0.025641026 0.05 39 3 0 37 X:16387950-16388035 8 CG4239 FBtr0074270|FBtr0074269|FBtr0340314|FBtr0074268 16387959|16387959|16387959|16387959 16388702|16388702|16388702|16388702 GTACTTAA 8mer-A1 dme-miR-252-5p X + 16387972 16388024 3'utr CG4239 FlyBase G46901.1 GTCAGCCCCATCTTCCCCCGGACAAATAGTACTTAACGCTGCCAGCCAAAGCT 17 16387998 0.932983327 6 15 66 0.875 1.322219295 0.166666667 0.294117647 0.5 17 3 0 21 X:16387972-16388024 8 20.5 4020 FBgn0030745 456.7933333 30.29666667 46.16666667 0.044878063 0.676642095 0.444043321 2 2 2 0.15 dme-miR-14-3p 7mer-m8 AAGACTG X 16436783 16436789 + X_16436783_16436789_+ 0.654809568 0.39121802 0.523013794 0.186387408 hang FBtr0074276 16436732 16438454 X + 16436767 16436798 3'utr hang FlyBase G62140.1 CAGCAAGACAAGCAGTAAGACTGTGGCAGCAG 20 16436782 0.843587723 2 18 42 0.863636364 1.278753601 0.545454545 0.1 0.181818182 20 3 0 19 X:16436767-16436798 7 hang FBtr0074276 16436732 16438454 AAGACTG 7mer-m8 dme-miR-14-3p X + 16436758 16436798 3'utr hang FlyBase G46929.1 CAATAATAACAGCAAGACAAGCAGTAAGACTGTGGCAGCAG 16 16436790 0.852672449 3 14 33 0.894736842 1.230448921 0.473684211 0.1875 0.315789474 16 2 0 17 X:16436758-16436798 7 17.5 4021 FBgn0026575 3688.81 55.80333333 85.77333333 0.004744077 0.313601338 0.204026115 1 -7 -3 0.15 dme-miR-33-5p 8mer-A1 CAATGCAA X 16436888 16436895 + X_16436888_16436895_+ 0.581406337 0.554808365 0.568107351 0.018807555 hang FBtr0343571|FBtr0290069|FBtr0074276 16436811|16436811|16436732 16438454|16438454|16438454 X + 16436808 16436927 stop_codon hang FlyBase G62141.1 ATTGAGTGATCATACTCCAACTACAACTCCAACTACCACTACCACTACCAACCACAACTACCAACCACACCTCATCATCTCAATGCAAAATCACTTGAAATGTACAAAGCCAATCCAATC 48 16436908 0.949845876 13 47 206 0.983050847 1.763427994 0.033898305 0.208333333 0.355932203 48 1 0 58 X:16436808-16436927 8 hang FBtr0343571|FBtr0290069|FBtr0074276 16436811|16436811|16436732 16438454|16438454|16438454 CAATGCAA 8mer-A1 dme-miR-33-5p X + 16436801 16436926 stop_codon hang FlyBase G46930.1 GCGACAAATTGAGTGATCATACTCCAACTACAACTCCAACTACCACTACCACTACCAACCACAACTACCAACCACACCTCATCATCTCAATGCAAAATCACTTGAAATGTACAAAGCCAATCCAAT 23 16436908 0.810966884 10 22 96 0.970588235 1.217483944 0 0.347826087 0.558823529 23 0 1 33 X:16436801-16436926 8 14 4022 FBgn0026575 3688.81 55.80333333 85.77333333 0.003795262 0.25088107 0.163220892 -20 -20 -20 0.15 dme-miR-14-3p 6mer3-8 AAGACT X 16437147 16437152 + X_16437147_16437152_+ 0.999769754 0.940066281 0.969918017 0.04221675 hang FBtr0343571|FBtr0290069|FBtr0074276 16436811|16436811|16436732 16438454|16438454|16438454 X + 16437087 16437201 3'utr hang FlyBase G62143.1 AACTTTTTTTTCTTGCTTCTAGTCTTAAGAACTTAAATTACATATATGTACATCATATATAAGACTTTTTTTTTAAATGTTAACCTAGTATGTACCGCGCACACACCCACACACA 73 16437154 0.992570651 18 63 730 0.875 1.146128036 0.010416667 0.273972603 0.447916667 73 7 5 84 X:16437087-16437201 6 hang FBtr0343571|FBtr0290069|FBtr0074276 16436811|16436811|16436732 16438454|16438454|16438454 AAGACT 6mer3-8 dme-miR-14-3p X + 16437076 16437166 3'utr hang FlyBase G46932.1 TTATATAACAAAACTTTTTTTTCTTGCTTCTAGTCTTAAGAACTTAAATTACATATATGTACATCATATATAAGACTTTTTTTTTAAATGT 41 16437154 0.991006703 14 40 432 0.983333333 1.770852012 0.066666667 0.341463415 0.55 41 1 0 59 X:16437076-16437166 6 28 4023 FBgn0026575 3688.81 55.80333333 85.77333333 0.007590524 0.501762141 0.326441785 -7 -7 -7 0.15 dme-miR-305-3p 6mer2-7 TGTGCC X 16438886 16438891 - X_16438886_16438891_- 0.951296773 0.949423211 0.950359992 0.001324835 CG9947 FBtr0343350 16437419 16439498 X - 16438850 16439054 3'utr CG9947 FlyBase G68114.1 TTTGTTGATGTTCTGTTCGTCCTTGATCCTATATGTGTGCACCCAATTTGTGATTTTTTCTATAACCTATTCCACCGCACATCACACACAACAAACAGTGGATACCCTTTGCAACATCCACACGAATTTCCACCATTGCTTTAGAAACAGCAAAGTAATACTTTGTGCCTGACTTAATCTGCATTGCCTTTTACTACGTTTATAC 214 16438891 0.988902453 28 209 1970 0.973684211 2.413299764 0.27443609 0.200934579 0.357142857 214 7 0 259 X:16438850-16439054 6 CG9947 FBtr0343350 16437419 16439498 TGTGCC 6mer2-7 dme-miR-305-3p X - 16438852 16438959 3'utr CG9947 FlyBase G51272.1 CAGTGGATACCCTTTGCAACATCCACACGAATTTCCACCATTGCTTTAGAAACAGCAAAGTAATACTTTGTGCCTGACTTAATCTGCATTGCCTTTTACTACGTTTAT 62 16438891 0.982563921 11 62 468 1 1.995635195 0.161616162 0.403225806 0.626262626 62 0 0 99 X:16438852-16438959 6 72.5 4024 FBgn0030752 672.6566667 47.85 73.07333333 0.107781582 1.515151515 0.992154001 0 0 0 0.15 dme-miR-1012-3p 6mer2-7 TGACTA X 16445250 16445255 + X_16445250_16445255_+ 0.999964678 0.999989823 0.999977251 1.77E-05 rngo FBtr0343349 16444757 16445367 X + 16445212 16445268 3'utr rngo FlyBase G62161.1 TGAAACAAGTAAATACAAAAGAAAAACGAAAGAATGCCTGACTATTAAATAATATTA 13 16445255 0.903037769 5 12 57 0.933333333 1.146128036 0.066666667 0.153846154 0.266666667 13 1 0 14 X:16445212-16445268 6 rngo FBtr0343349 16444757 16445367 TGACTA 6mer2-7 dme-miR-1012-3p X + 16445238 16445268 3'utr rngo FlyBase G46943.1 CGAAAGAATGCCTGACTATTAAATAATATTA 9 16445256 0.762802238 3 6 53 0.769230769 1 0 0.333333333 0.538461538 9 3 0 10 X:16445238-16445268 6 10 4025 FBgn0030753 1218.62 66.64333333 101.9733333 0.008206004 0.150052518 0.098064854 -5 -6 -5.5 0.15 dme-miR-932-5p 6mer2-7 GAATTG X 16445317 16445322 + X_16445317_16445322_+ 0.977693795 0.57670726 0.777200527 0.283540273 rngo FBtr0343349 16444757 16445367 X + 16445280 16445360 3'utr rngo FlyBase G62162.1 AATTTGAATTAGTATTAAGGGTCTGTCAAGAAAAACTGAATTGGGTTCAATAATAAATGGTCGATAGTATTGTTTTGGATT 32 16445320 0.80084538 7 31 244 0.975 1.290034611 0.125 0.1875 0.35 32 0 1 39 X:16445280-16445360 6 rngo FBtr0343349 16444757 16445367 GAATTG 6mer2-7 dme-miR-932-5p X + 16445308 16445350 3'utr rngo FlyBase G46944.1 AGAAAAACTGAATTGGGTTCAATAATAAATGGTCGATAGTATT 8 16445320 0.776556172 3 8 53 1 1.113943352 0.153846154 0.5 0.692307692 8 0 0 13 X:16445308-16445350 6 11 4026 FBgn0030753 1218.62 66.64333333 101.9733333 0.009026604 0.16505777 0.107871339 -3 -3 -3 0.15 dme-miR-305-3p 6mer3-8 ATGTGC X 16452645 16452650 + X_16452645_16452650_+ 0.550423484 0.998926828 0.774675156 0.317139725 Rbp2 FBtr0343633|FBtr0074280|FBtr0343632|FBtr0074281|FBtr0074279 16452084|16452084|16452084|16452084|16452084 16453615|16454972|16453615|16453615|16454972 X + 16452615 16452716 3'utr Rbp2 FlyBase G62172.1 TATATATATGGTATATATATATATACGGTTATGTGCGCTTCATTGTACAGCAGCTGTATGCACGCTGCTATTTGTTAGTTAAGTGATGGATATAAACCAACA 14 16452658 0.994985638 7 13 138 0.933333333 1.146128036 0.333333333 0.071428571 0.133333333 14 1 0 14 X:16452615-16452716 6 Rbp2 FBtr0074279|FBtr0343633|FBtr0074280|FBtr0343632|FBtr0074281 16452084|16452084|16452084|16452084|16452084 16454972|16453615|16454972|16453615|16453615 ATGTGC 6mer3-8 dme-miR-305-3p X + 16452633 16452690 3'utr Rbp2 FlyBase G46952.1 ATATATACGGTTATGTGCGCTTCATTGTACAGCAGCTGTATGCACGCTGCTATTTGTT 6 16452648 0.9840768 3 5 51 1 1.041392685 0.454545455 0.5 0.727272727 6 0 0 11 X:16452633-16452690 6 6.5 4027 FBgn0262734 5061.32 184.5666667 285.3533333 0.00128425 0.035217627 0.022778777 -13 -3 -8 0.15 dme-bantam-3p 7mer-A1 GATCTCA X 1649339 1649345 + X_1649339_1649345_+ 0.822862129 0.822883097 0.822872613 1.48E-05 br FBtr0070261|FBtr0330406|FBtr0300427|FBtr0300428|FBtr0332293|FBtr0070263 1648712|1649105|1648712|1648712|1648712|1648712 1649378|1649378|1649378|1649378|1649378|1649378 X + 1649280 1649357 3'utr br FlyBase G58005.1 GAAAAAGGAGCAGAGGGAGATTAGGACTATACTACTACCACGTAGACATTTCAATTTCGGATCTCACAGAACGGAAAA 40 1649335 0.974229974 7 39 240 1 1.653212514 0.4 0.125 0.222222222 40 0 0 45 X:1649280-1649357 7 br FBtr0300427|FBtr0070261|FBtr0330406|FBtr0070263|FBtr0300428|FBtr0332293 1648712|1648712|1649105|1648712|1648712|1648712 1649378|1649378|1649378|1649378|1649378|1649378 GATCTCA 7mer-A1 dme-bantam-3p X + 1649282 1649362 3'utr br FlyBase G43884.1 AAAAGGAGCAGAGGGAGATTAGGACTATACTACTACCACGTAGACATTTCAATTTCGGATCTCACAGAACGGAAAATTCAA 33 1649335 0.982257346 8 29 214 0.895833333 1.633468456 0.3125 0.333333333 0.541666667 33 5 0 43 X:1649282-1649362 7 25.5 4028 FBgn0000210 1688.696667 27.97 43.00333333 0.015100403 0.911691098 0.592977289 4 4 4 0.15 dme-bantam-3p 8mer-A1 TGATCTCA X 16543637 16543644 - X_16543637_16543644_- 0.63070816 0.63077673 0.630742445 4.84E-05 CG9902 FBtr0074296|FBtr0334035 16543568|16542122 16543682|16543682 X - 16543620 16543672 3'utr CG9902 FlyBase G68143.1 AGTCCCCAGGAGATGTCATAGAAACTAGTGATCTCAAACAGGTCCCCCTAAAT 145 16543644 0.73443773 7 141 637 0.98245614 2.225309282 0.087719298 0.166666667 0.298245614 144 3 0 168 X:16543620-16543672 8 CG9902 FBtr0334035 16542122 16543682 TGATCTCA 8mer-A1 dme-bantam-3p X - 16543581 16543771 stop_codon CG9902 FlyBase G51293.1 TGATCCATGACGCCCTAAAAACTACAAACGTGCCACAGAAGACTCTGGACTTACAGTTCTTGTCCAAGAAGCACATAAGAACTGGATAACAGACCCAGGAGTCCCCAGGAGATGTCATAGAAACTAGTGATCTCAAACAGGTCCCCCTAAATAGCCTGTTCAAAGTAGAGGGACTGGATGCAAGACAGGCG 112 16543644 0.956704622 14 106 480 0.950310559 1.883661435 0.093167702 0.383928571 0.571428571 112 7 1 153 X:16543581-16543771 8 115.5 4029 FBgn0030757 334.18 9.023333333 13.79333333 0.34562212 12.80014777 8.37361044 0 0 0 0.15 dme-miR-276a-3p 6mer2-7 GTTCCT X 16556788 16556793 - X_16556788_16556793_- 0.99544138 0.90907919 0.952260285 0.061067297 Pp2B-14D FBtr0074294|FBtr0309793|FBtr0305593 16556762|16554625|16555464 16557694|16557694|16557694 X - 16556774 16556806 3'utr Pp2B-14D FlyBase G68170.1 ATAGTCCATAAATGTTCCTTATACGAATTAAAC 8 16556794 0.903501627 2 8 62 1 1.113943352 0 0.375 0.615384615 8 0 0 13 X:16556774-16556806 6 Pp2B-14D FBtr0305593|FBtr0309793|FBtr0074294 16555464|16554625|16556762 16557694|16557694|16557694 GTTCCT 6mer2-7 dme-miR-276a-3p X - 16556784 16556832 3'utr Pp2B-14D FlyBase G51313.1 CGAAACCATTTGCAATATGTGCCGCAATAGTCCATAAATGTTCCTTATA 5 16556787 0.984620057 4 5 36 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 X:16556784-16556832 6 5.5 4030 FBgn0011826 681.1066667 22.76 35.00666667 0.008075093 0.241652021 0.157112931 1 -6 -2.5 0.15 dme-miR-932-5p 6mer2-7 GAATTG X 16557616 16557621 - X_16557616_16557621_- 0.996710653 0.981788934 0.989249793 0.010551306 Pp2B-14D FBtr0074294|FBtr0309793|FBtr0305593 16556762|16554625|16555464 16557694|16557694|16557694 X - 16557592 16557658 3'utr Pp2B-14D FlyBase G68175.1 AGATGCAGATGCGGCACGGTGGAGTCTGGCGAGGTCTGAATTGGTCTGAAGGAGGGGCTGAGTGGAG 13 16557618 0.732007478 6 12 71 1 1.113943352 0.461538462 0 0 13 0 0 13 X:16557592-16557658 6 Pp2B-14D FBtr0305593|FBtr0309793|FBtr0074294 16555464|16554625|16556762 16557694|16557694|16557694 GAATTG 6mer2-7 dme-miR-932-5p X - 16557581 16557655 3'utr Pp2B-14D FlyBase G51315.1 TGCAGATGCGGCACGGTGGAGTCTGGCGAGGTCTGAATTGGTCTGAAGGAGGGGCTGAGTGGAGCGGAGCGGAGG 8 16557618 0.954280191 5 8 38 1 1 0.3 0.25 0.4 8 0 0 10 X:16557581-16557655 6 7 4031 FBgn0011826 681.1066667 22.76 35.00666667 0.010277392 0.307557118 0.199961912 -3 -3 -3 0.15 dme-miR-1003-3p 6mer3-8 ATGTGA X 16564044 16564049 - X_16564044_16564049_- 0.593778529 0.608298874 0.601038701 0.010267473 CanA-14F FBtr0305198|FBtr0074293 16560682|16561675 16566275|16566275 X - 16564018 16564071 3'utr CanA-14F FlyBase G68186.1 AAAACAGAAAAGAAACCGAACTATGTGAATTAACTATTAAGTTTAAATTATACA 19 16564042 0.978540548 4 19 130 1 1.414973348 0.115384615 0.315789474 0.5 19 0 0 26 X:16564018-16564071 6 CanA-14F FBtr0074293|FBtr0305198 16561675|16560682 16566275|16566275 ATGTGA 6mer3-8 dme-miR-1003-3p X - 16564028 16564072 3'utr CanA-14F FlyBase G51321.1 AAAAACAGAAAAGAAACCGAACTATGTGAATTAACTATTAAGTTT 22 16564042 0.980200402 3 22 159 1 1.491361694 0.225806452 0.409090909 0.580645161 22 0 0 31 X:16564028-16564072 6 20.5 4032 FBgn0030758 2469.373333 77.76333333 120.6366667 0.008301701 0.263620387 0.169931751 -7 -7 -7 0.15 dme-miR-12-5p 6mer3-8 AATACT X 1659716 1659721 + X_1659716_1659721_+ 0.98899157 0.948062335 0.968526953 0.028941386 br FBtr0070265|FBtr0303562 1659601|1654641 1664869|1664869 X + 1659693 1659731 3'utr br FlyBase G58010.1 AGCAGCAGCCAAGACCAGCTACAAATACTTTGCCCATTG 9 1659718 0.97205643 3 9 53 1 0.954242509 0.555555556 0 0 9 0 0 9 X:1659693-1659731 6 br FBtr0070265|FBtr0303562 1659601|1654641 1664869|1664869 AATACT 6mer3-8 dme-miR-12-5p X + 1659696 1659734 3'utr br FlyBase G43887.1 AGCAGCCAAGACCAGCTACAAATACTTTGCCCATTGTTT 10 1659729 0.990986426 4 6 61 0.625 0.698970004 0.0625 0.4 0.625 10 5 1 10 X:1659696-1659734 6 9 4033 FBgn0000210 1688.696667 27.97 43.00333333 0.005329554 0.321773329 0.209286102 -2 -13 -7.5 0.15 dme-miR-317-5p 6mer2-7 TATCCC X 1659883 1659888 + X_1659883_1659888_+ 0.827713384 0.82434807 0.826030727 0.002379626 br FBtr0070265|FBtr0303562 1659601|1654641 1664869|1664869 X + 1659844 1659888 3'utr br FlyBase G58011.1 ATATTAGGCATATTTTGGCGTCAACTGTTTTATTACTCTTATCCC 15 1659876 0.850632795 5 12 156 0.866666667 1.113943352 0 0 0 15 2 0 13 X:1659844-1659888 6 br FBtr0070265|FBtr0303562 1659601|1654641 1664869|1664869 TATCCC 6mer2-7 dme-miR-317-5p X + 1659850 1659883 3'utr br FlyBase G43888.1 GGCATATTTTGGCGTCAACTGTTTTATTACTCTT 9 1659876 0.91975619 4 7 80 0.818181818 0.954242509 0.090909091 0.222222222 0.363636364 9 2 0 9 X:1659850-1659883 1 5 4034 FBgn0000210 1688.696667 27.97 43.00333333 0.002960863 0.17876296 0.116270057 7 7 7 0.15 dme-miR-980-3p 6mer3-8 GGCAGC X 16609165 16609170 + X_16609165_16609170_+ 0.999067948 0.999913959 0.999490953 0.000598283 Nup153 FBtr0074284|FBtr0340158|FBtr0299587 16609097|16609097|16609097 16610459|16610459|16610459 X + 16609106 16609184 3'utr Nup153 FlyBase G62212.1 ATCGCAGTCGGCCATCACGATAGCAAATGAGGCCGCCGTCGGATTAGGATTAAGATATTGGCAGCCATTGCCGAGAGTA 15 16609164 0.994684754 6 14 66 1 1.146128036 0.142857143 0 0 14 0 0 14 X:16609106-16609184 6 Nup153 FBtr0299587|FBtr0074284|FBtr0340158 16609097|16609097|16609097 16610459|16610459|16610459 GGCAGC 6mer3-8 dme-miR-980-3p X + 16609127 16609181 3'utr Nup153 FlyBase G46977.1 AGCAAATGAGGCCGCCGTCGGATTAGGATTAAGATATTGGCAGCCATTGCCGAGA 6 16609164 0.948960344 3 5 25 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 X:16609127-16609181 6 5.5 4035 FBgn0061200 3129.656667 47.90333333 73.78666667 0.001757381 0.114814557 0.074539212 1 1 1 0.15 dme-miR-2a-2-5p 6mer3-8 TGATGA X 16609733 16609738 + X_16609733_16609738_+ 0.998213406 0.969975984 0.984094695 0.019966857 Nup153 FBtr0074284|FBtr0340158|FBtr0299587 16609097|16609097|16609097 16610459|16610459|16610459 X + 16609719 16609754 3'utr Nup153 FlyBase G62214.1 CATACTACGCATATTGATGATTACAAATTATAAAAA 8 16609733 0.670631461 4 8 54 1 0.954242509 0 0.125 0.222222222 8 0 0 9 X:16609719-16609754 6 Nup153 FBtr0299587|FBtr0074284|FBtr0340158 16609097|16609097|16609097 16610459|16610459|16610459 TGATGA 6mer3-8 dme-miR-2a-2-5p X + 16609722 16609751 3'utr Nup153 FlyBase G46978.1 ACTACGCATATTGATGATTACAAATTATAA 5 16609733 0.638750851 4 5 35 1 0.954242509 0 0.6 0.777777778 5 0 0 9 X:16609722-16609751 6 6.5 4036 FBgn0061200 3129.656667 47.90333333 73.78666667 0.002076905 0.135689931 0.088091796 0 0 0 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT X 16614135 16614141 + X_16614135_16614141_+ 0.658957744 0.658956741 0.658957242 7.07E-07 mbt FBtr0074285 16614013 16614856 X + 16613967 16614180 stop_codon mbt FlyBase G62229.1 CCGTCGCTGCTGGTTCCGCTGATGCGCAATGCGCGACACCATCCGTAGTTGGATGCCACTGGACAACCCAGACGATCCGGCTGCTCGATGAAAGCAATCATTCCCACAGACAACGGATCCCGGCCCGTGGGCATCCATCTATTAAATTCTAGTATTAACATTCAGTTTGGCAGCTGTACTTAAATCCCCGGAGAATCCTCGAAACGTTGTAAAG 633 16614133 0.953262788 26 615 5004 0.970914127 2.146748014 0.159279778 0.129541864 0.236842105 633 17 4 701 X:16613967-16614180 7 mbt FBtr0074285 16614013 16614856 GGCAGCT 7mer-m8 dme-miR-980-3p X + 16614110 16614168 3'utr mbt FlyBase G46987.1 AAATTCTAGTATTAACATTCAGTTTGGCAGCTGTACTTAAATCCCCGGAGAATCCTCGA 455 16614133 0.737649622 10 444 3565 0.979885057 2.231724383 0.139367816 0.384615385 0.597701149 455 11 3 682 X:16614110-16614168 7 529 4037 FBgn0025743 524.9733333 19.44666667 29.74666667 1.007670231 27.20260542 17.78350515 2 2 2 0.15 dme-miR-277-3p 7mer-A1 GCATTTA X 16614318 16614324 + X_16614318_16614324_+ 0.823349516 0.822474685 0.8229121 0.000618577 mbt FBtr0074285 16614013 16614856 X + 16614299 16614334 3'utr mbt FlyBase G62231.1 CGGATGGAGAAACGATATAGCATTTATCTGCCCGAG 7 16614316 0.684407251 4 7 41 1 1.079181246 0.25 0.571428571 0.75 7 0 0 12 X:16614299-16614334 7 mbt FBtr0074285 16614013 16614856 GCATTTA 7mer-A1 dme-miR-277-3p X + 16614283 16614338 3'utr mbt FlyBase G46988.1 CATCCTGCAACCGATACGGATGGAGAAACGATATAGCATTTATCTGCCCGAGAACC 6 16614326 0.965924525 4 5 27 0.714285714 0.698970004 0.285714286 0.166666667 0.285714286 6 2 0 5 X:16614283-16614338 7 5.5 4038 FBgn0025743 524.9733333 19.44666667 29.74666667 0.010476723 0.28282482 0.184894666 2 -8 -3 0.15 dme-miR-277-3p 6mer2-7 GCATTT X 16614383 16614388 + X_16614383_16614388_+ 0.865805258 0.999997653 0.932901455 0.094888356 mbt FBtr0074285 16614013 16614856 X + 16614373 16614433 3'utr mbt FlyBase G62232.1 GAGTATTTCAGCATTTTGCTCTCTGTCTCTTGTCAATATTGATTTGTGTGCGTGTGTGTTT 7 16614389 0.998602379 5 5 81 0.777777778 0.84509804 0.222222222 0.142857143 0.333333333 7 2 0 7 X:16614373-16614433 6 mbt FBtr0074285 16614013 16614856 GCATTT 6mer2-7 dme-miR-277-3p X + 16614354 16614404 3'utr mbt FlyBase G46989.1 TATATATATATACATATATGAGTATTTCAGCATTTTGCTCTCTGTCTCTTG 6 16614389 0.993776173 5 5 64 0.875 0.84509804 0.125 0.166666667 0.375 6 1 0 7 X:16614354-16614404 6 4.5 4039 FBgn0025743 524.9733333 19.44666667 29.74666667 0.008571864 0.231402125 0.151277454 -6 -6 -6 0.15 dme-miR-2a-2-5p 6mer3-8 TGATGA X 16624331 16624336 - X_16624331_16624336_- 0.999935994 0.999748949 0.999842472 0.0001323 Rok FBtr0074286|FBtr0340151 16624209|16624209 16626162|16626162 X - 16624297 16624346 3'utr Rok FlyBase G68217.1 ACTATTATTATGATGATCATTCGTATTACGTTTATGTTTAATTGTACTCT 12 16624336 0.990467617 5 11 125 1 1.176091259 0 0.166666667 0.333333333 12 0 0 15 X:16624297-16624346 6 Rok FBtr0074286|FBtr0340151 16624209|16624209 16626162|16626162 TGATGA 6mer3-8 dme-miR-2a-2-5p X - 16624319 16624346 3'utr Rok FlyBase G51339.1 ACTATTATTATGATGATCATTCGTATTA 11 16624336 0.752953059 2 10 104 0.9375 1.176091259 0 0.272727273 0.5 11 1 0 15 X:16624319-16624346 6 10.5 4040 FBgn0026181 1648.443333 28.48333333 43.82 0.006369646 0.36863663 0.239616613 0 0 0 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA X 16624512 16624519 - X_16624512_16624519_- 0.614541258 0.614783459 0.614662359 0.000171261 Rok FBtr0074286|FBtr0340151 16624209|16624209 16626162|16626162 X - 16624492 16624566 3'utr Rok FlyBase G68218.1 GTTTTACAGAGCAGAGTGTATGTACAGAGTGAGAGGCGCCAGCGGATTGCATTTAAAAGTAACAATAATAGCGAA 193 16624520 0.910514222 4 190 915 0.995391705 2.033423755 0.400921659 0.10880829 0.207373272 193 0 1 216 X:16624492-16624566 8 Rok FBtr0074286|FBtr0340151 16624209|16624209 16626162|16626162 TGCATTTA 8mer-A1 dme-miR-277-3p X - 16624496 16624561 3'utr Rok FlyBase G51340.1 ACAGAGCAGAGTGTATGTACAGAGTGAGAGGCGCCAGCGGATTGCATTTAAAAGTAACAATAATAG 117 16624520 0.907027154 5 116 560 0.98757764 1.72427587 0.341614907 0.324786325 0.50931677 117 0 2 159 X:16624496-16624561 8 149 4041 FBgn0026181 1648.443333 28.48333333 43.82 0.090388306 5.231129315 3.400273848 1 1 1 0.15 dme-miR-33-5p 8mer-A1 CAATGCAA X 16625779 16625786 - X_16625779_16625786_- 0.633960967 0.625060404 0.629510685 0.006293675 Rok FBtr0340153|FBtr0074286|FBtr0340151 16625107|16624209|16624209 16626162|16626162|16626162 X - 16625767 16625810 3'utr Rok FlyBase G68225.1 TGTATCTTAAAGAACATGTAATGCCAATGCAACTCGTTTAACGC 26 16625789 0.827796051 6 24 150 0.933333333 1.146128036 0.066666667 0.115384615 0.233333333 26 1 1 28 X:16625767-16625810 8 Rok FBtr0074286|FBtr0340151|FBtr0340153 16624209|16624209|16625107 16626162|16626162|16626162 CAATGCAA 8mer-A1 dme-miR-33-5p X - 16625758 16625815 3'utr Rok FlyBase G51347.1 AAAGCTGTATCTTAAAGAACATGTAATGCCAATGCAACTCGTTTAACGCTTACCTAAC 19 16625789 0.964536286 3 18 102 1 1.531478917 0.382352941 0.421052632 0.676470588 19 0 0 34 X:16625758-16625815 8 21 4042 FBgn0026181 1648.443333 28.48333333 43.82 0.012739291 0.737273259 0.479233227 3 3 3 0.15 dme-miR-980-3p 6mer2-7 GCAGCT X 16626085 16626090 - X_16626085_16626090_- 0.937977398 0.944733092 0.941355245 0.004777001 Rok FBtr0340153|FBtr0074286|FBtr0340151 16625107|16624209|16624209 16626162|16626162|16626162 X - 16626054 16626113 3'utr Rok FlyBase G68227.1 TGCCAGATCGCAGGCGTGGCAATGCAGCTTGAGCCGGAGCAGTCGCGACTCTCCAGCCCC 80 16626084 0.728811412 4 73 263 0.923076923 1.225309282 0.285714286 0.1375 0.241758242 80 3 4 84 X:16626054-16626113 6 Rok FBtr0074286|FBtr0340151|FBtr0340153 16624209|16624209|16625107 16626162|16626162|16626162 GCAGCT 6mer2-7 dme-miR-980-3p X - 16626064 16626113 3'utr Rok FlyBase G51349.1 TGCCAGATCGCAGGCGTGGCAATGCAGCTTGAGCCGGAGCAGTCGCGACT 52 16626084 0.709587782 4 50 164 0.964285714 1.306425028 0.345238095 0.403846154 0.630952381 52 0 3 81 X:16626064-16626113 6 64.5 4043 FBgn0026181 1648.443333 28.48333333 43.82 0.039127824 2.264482153 1.471930625 -6 -6 -6 0.15 dme-bantam-3p 6mer3-8 TGATCT X 1662652 1662657 + X_1662652_1662657_+ 0.89478999 0.929101942 0.911945966 0.024262177 br FBtr0070265|FBtr0303562 1659601|1654641 1664869|1664869 X + 1662617 1662671 3'utr br FlyBase G58016.1 GAAAACGAAAAATAATGCAAATGCAAAACAAACTGTGATCTTACAAGTTTTTGAA 37 1662657 0.956516728 5 34 175 0.93877551 1.361727836 0 0.216216216 0.408163265 37 2 1 46 X:1662617-1662671 6 br FBtr0070265|FBtr0303562 1659601|1654641 1664869|1664869 TGATCT 6mer3-8 dme-bantam-3p X + 1662634 1662660 3'utr br FlyBase G43891.1 CAAATGCAAAACAAACTGTGATCTTAC 19 1662657 0.698437328 4 18 87 0.96 1.380211242 0 0.157894737 0.36 19 1 0 24 X:1662634-1662660 6 26.5 4044 FBgn0000210 1688.696667 27.97 43.00333333 0.015692576 0.94744369 0.6162313 -5 -5 -5 0.15 dme-miR-305-5p 8mer-m1 AGTACAAT X 16649157 16649164 + X_16649157_16649164_+ 0.361525595 0.471415296 0.416470445 0.077703752 mthl1 FBtr0074314|FBtr0340150 16643506|16643506 16649697|16650309 X + 16649119 16649168 3'utr mthl1 FlyBase G62241.1 ATGTATTTTAGCTCTTGAAAACGCAGAAACTACAATGCAGTACAATTATT 10 16649155 0.964380718 4 9 49 0.923076923 1.079181246 0 0.2 0.384615385 10 1 0 12 X:16649119-16649168 8 mthl1 FBtr0340150|FBtr0074314 16643506|16643506 16650309|16649697 AGTACAAT 8mer-m1 dme-miR-305-5p X + 16649082 16649182 3'utr mthl1 FlyBase G46998.1 GAGATGTATTCCCCCTCCCAATTACAAACGTATTTTTATGTATTTTAGCTCTTGAAAACGCAGAAACTACAATGCAGTACAATTATTATTTCTCATAAGAT 15 16649154 0.972312921 7 15 95 1 1.447158031 0 0.266666667 0.607142857 15 0 0 28 X:16649082-16649182 8 10 4045 FBgn0030766 372.0033333 8.846666667 13.59666667 0.02688148 1.130369254 0.735474381 2 3 2.5 0.15 dme-miR-34-5p 7mer-m8 CACTGCC X 1673484 1673490 + X_1673484_1673490_+ 0.595142756 0.707872266 0.651507511 0.079711794 hfw FBtr0333115 1672755 1673608 X + 1673445 1673506 3'utr hfw FlyBase G58040.1 TTAAATATGTTGACTTGGTATTATTAGGGGACTCTTTAACACTGCCTTTCGCATAGGTTGTT 38 1673492 0.764482353 9 37 326 1 1.612783857 0.195121951 0.052631579 0.12195122 38 0 0 41 X:1673445-1673506 7 hfw FBtr0333115 1672755 1673608 CACTGCC 7mer-m8 dme-miR-34-5p X + 1673416 1673504 3'utr hfw FlyBase G43904.1 TGGCCACGTGCCCTGGTTTAACTTTATACTTAAATATGTTGACTTGGTATTATTAGGGGACTCTTTAACACTGCCTTTCGCATAGGTTG 30 1673492 0.986820923 12 29 256 0.975609756 1.602059991 0.219512195 0.333333333 0.512195122 30 1 0 40 X:1673416-1673504 7 26.5 4046 FBgn0001189 807.7733333 37.06333333 56.35333333 0.032806233 0.714992355 0.470247249 -8 -8 -8 0.15 dme-miR-8-3p 8mer-A1 CAGTATTA X 1674224 1674231 - X_1674224_1674231_- 0.671682556 0.671679593 0.671681075 2.12E-06 CG32809 FBtr0308321|FBtr0333117|FBtr0333120|FBtr0333118|FBtr0308323|FBtr0333119|FBtr0308324 1673336|1673108|1673336|1673336|1673336|1673336|1673336 1675880|1675880|1675880|1677054|1675880|1675880|1677238 X - 1674202 1674267 3'utr CG32809 FlyBase G64043.1 ATTTGTTAACCTTACTGCCCGGCCAGTATTAGACTTCAGTATTATAGGCTAATTTACATTTAAATA 41 1674232 0.884651353 10 37 364 0.93877551 1.662757832 0.142857143 0.146341463 0.285714286 41 3 0 46 X:1674202-1674267 8 CG32809 FBtr0333120|FBtr0333117|FBtr0308321|FBtr0308324|FBtr0333119|FBtr0308323|FBtr0333118 1673336|1673108|1673336|1673336|1673336|1673336|1673336 1675880|1675880|1675880|1677238|1675880|1675880|1677054 CAGTATTA 8mer-A1 dme-miR-8-3p X - 1674179 1674282 3'utr CG32809 FlyBase G48272.1 CGTGCACACACATAGATTTGTTAACCTTACTGCCCGGCCAGTATTAGACTTCAGTATTATAGGCTAATTTACATTTAAATAAACTTGTAACACACGACTTGAGA 28 1674232 0.990554333 13 23 235 0.863636364 1.278753601 0.25 0.392857143 0.613636364 28 5 1 38 X:1674179-1674282 8 25 4047 FBgn0023531 281.8933333 6.233333333 9.576666667 0.088686028 4.010695187 2.61051166 1 1 1 0.15 dme-miR-14-3p 7mer-A1 AGACTGA X 1674797 1674803 - X_1674797_1674803_- 0.725869733 0.731799976 0.728834855 0.004193355 CG32809 FBtr0308321|FBtr0333117|FBtr0333120|FBtr0333118|FBtr0308323|FBtr0333119|FBtr0308324 1673336|1673108|1673336|1673336|1673336|1673336|1673336 1675880|1675880|1675880|1677054|1675880|1675880|1677238 X - 1674770 1674827 3'utr CG32809 FlyBase G64044.1 ATTATTACCTTGGTATGGGACGTGAGACTGATAGTTCTATATATGTAGCTCATCAAGA 150 1674805 0.963442001 9 148 1182 0.993975904 2.217483944 0.409638554 0.093333333 0.180722892 150 1 0 165 X:1674770-1674827 7 CG32809 FBtr0333120|FBtr0333117|FBtr0308321|FBtr0308324|FBtr0333119|FBtr0308323|FBtr0333118 1673336|1673108|1673336|1673336|1673336|1673336|1673336 1675880|1675880|1675880|1677238|1675880|1675880|1677054 AGACTGA 7mer-A1 dme-miR-14-3p X - 1674779 1674826 3'utr CG32809 FlyBase G48273.1 TTATTACCTTGGTATGGGACGTGAGACTGATAGTTCTATATATGTAGC 102 1674805 0.957475816 6 95 848 0.90625 1.860338007 0.4375 0.421568627 0.63125 102 14 1 145 X:1674779-1674826 7 124.5 4048 FBgn0023531 281.8933333 6.233333333 9.576666667 0.441656419 19.97326203 13.00034807 2 2 2 0.15 dme-miR-282-5p 8mer-A1 AGAGGCTA X 16785427 16785434 - X_16785427_16785434_- 0.62826986 0.63196912 0.63011949 0.002615729 CG9609 FBtr0074356 16785113 16785478 X - 16785376 16785460 3'utr CG9609 FlyBase G68258.1 GGGACGGGAGTGAGAAGGTCTGGTCAAGAGGCTAACAATTGAATGACTACTTTAATTTAAACCACAACTTCTAAAAGAGAAACAA 28 16785438 0.967379161 10 26 140 0.933333333 1.447158031 0.366666667 0.035714286 0.1 28 2 0 28 X:16785376-16785460 8 CG9609 FBtr0074356 16785113 16785478 AGAGGCTA 8mer-A1 dme-miR-282-5p X - 16785390 16785456 3'utr CG9609 FlyBase G51372.1 CGGGAGTGAGAAGGTCTGGTCAAGAGGCTAACAATTGAATGACTACTTTAATTTAAACCACAACTTC 18 16785439 0.959681276 7 16 87 0.92 1.361727836 0.6 0.222222222 0.44 18 2 0 23 X:16785390-16785456 8 17.5 4049 FBgn0030787 206.1233333 13.74333333 21.09 0.084900626 1.273344652 0.829777146 4 5 4.5 0.15 dme-miR-14-3p 7mer-A1 AGACTGA X 16789595 16789601 + X_16789595_16789601_+ 0.823326556 0.823337375 0.823331966 7.64E-06 Sap30 FBtr0074331|FBtr0344089 16788694|16788694 16789644|16789644 X + 16789562 16789616 3'utr Sap30 FlyBase G62279.1 GAATTACGCATTAAACGATTTATGTTAAAGCCTAGACTGATTTTAGCCATACATA 29 16789603 0.979262646 8 29 200 1 1.544068044 0.2 0.172413793 0.314285714 29 0 0 35 X:16789562-16789616 7 Sap30 FBtr0344089|FBtr0074331 16788694|16788694 16789644|16789644 AGACTGA 7mer-A1 dme-miR-14-3p X + 16789550 16789617 3'utr Sap30 FlyBase G47024.1 ACAAATCAATTGGAATTACGCATTAAACGATTTATGTTAAAGCCTAGACTGATTTTAGCCATACATAT 22 16789602 0.9864013 6 18 148 0.8125 0.937852093 0.09375 0.318181818 0.53125 22 4 2 26 X:16789550-16789617 7 24.5 4050 FBgn0030788 191.5866667 13.93666667 21.27333333 0.127879463 1.757952643 1.15167659 -8 -7 -7.5 0.15 dme-miR-1008-3p 7mer-m8 AGCTGTG X 16795818 16795824 + X_16795818_16795824_+ 0.667115374 0.670567596 0.668841485 0.002441074 CG4768 FBtr0074332|FBtr0347029|FBtr0305899 16795317|16795317|16795317 16796023|16797742|16796756 X + 16795702 16795875 3'utr CG4768 FlyBase G62289.1 AAGATGTTTATGTTATAAGGATAATGCCGATGGTGGGCACAAACTGTTAATCATTGTCATCATGCATTAATGCGAACGGAGTGAAAAGCTTAGGAGTACGATATCTGTTATATGCCAGCTGTGCGTCTGATTTACGATTACGATTAAGCGAAGCAGTAATAGTGAATGGTATTG 46 16795821 0.98572663 19 44 352 0.961538462 1.698970004 0.134615385 0.130434783 0.230769231 46 2 0 50 X:16795702-16795875 7 CG4768 FBtr0305899|FBtr0074332|FBtr0347029 16795317|16795317|16795317 16796756|16796023|16797742 AGCTGTG 7mer-m8 dme-miR-1008-3p X + 16795656 16795834 3'utr CG4768 FlyBase G47029.1 TTGATAGCACTTAAGAAAAAAGTCATGTCGATTGTAATGACACCAGAAGATGTTTATGTTATAAGGATAATGCCGATGGTGGGCACAAACTGTTAATCATTGTCATCATGCATTAATGCGAACGGAGTGAAAAGCTTAGGAGTACGATATCTGTTATATGCCAGCTGTGCGTCTGATTT 38 16795822 0.986139149 16 35 286 0.93220339 1.263241435 0.050847458 0.447368421 0.644067797 38 2 2 55 X:16795656-16795834 7 25.5 4051 FBgn0030790 591.9266667 27.66333333 42.73 0.043079661 0.921797807 0.596770419 -3 -4 -3.5 0.15 dme-miR-1008-3p 7mer-m8 AGCTGTG X 16795949 16795955 + X_16795949_16795955_+ 0.671789823 0.671658927 0.671724375 9.26E-05 CG4768 FBtr0074332|FBtr0347029|FBtr0305899 16795317|16795317|16795317 16796023|16797742|16796756 X + 16795923 16795970 3'utr CG4768 FlyBase G62290.1 TTTTGCATTATGCAAACGACAAATGAAGCTGTGTAAATAACAACAAAA 48 16795946 0.875741007 4 44 204 0.945454545 1.238882089 0 0.125 0.236363636 48 1 2 52 X:16795923-16795970 7 CG4768 FBtr0305899|FBtr0074332|FBtr0347029 16795317|16795317|16795317 16796756|16796023|16797742 AGCTGTG 7mer-m8 dme-miR-1008-3p X + 16795923 16795970 3'utr CG4768 FlyBase G47031.1 TTTTGCATTATGCAAACGACAAATGAAGCTGTGTAAATAACAACAAAA 31 16795946 0.909399037 4 29 134 0.968253968 1.484299839 0.015873016 0.548387097 0.777777778 31 1 1 61 X:16795923-16795970 7 38 4052 FBgn0030790 591.9266667 27.66333333 42.73 0.064197142 1.373659477 0.889304938 3 3 3 0.15 dme-miR-307a-3p 6mer3-8 GGTTGT X 16798265 16798270 - X_16798265_16798270_- 0.983757518 0.999985331 0.991871424 0.011474787 CG9132 FBtr0074353|FBtr0074354|FBtr0306801 16796900|16797514|16797514 16798632|16798632|16798632 X - 16798250 16798359 3'utr CG9132 FlyBase G68271.1 CGTAGTTGCATCTCGCTCTAATTGAAGGAGTACGATGAGCGTGGGCAGAGTTCTCAGTGGGCGGGGATCTGTAGCGAACTATTTAGCCTGGTTGTTAATTGTATAAGTCA 38 16798277 0.935865827 13 31 257 0.829268293 1.230448921 0.390243902 0.078947368 0.146341463 38 6 1 34 X:16798250-16798359 6 CG9132 FBtr0306801|FBtr0074353|FBtr0074354 16797514|16796900|16797514 16798632|16798632|16798632 GGTTGT 6mer3-8 dme-miR-307a-3p X - 16798251 16798290 3'utr CG9132 FlyBase G51377.1 TGTAGCGAACTATTTAGCCTGGTTGTTAATTGTATAAGTC 13 16798271 0.77572534 5 13 126 1 1.301029996 0.05 0.384615385 0.6 13 0 0 20 X:16798251-16798290 6 14 4053 FBgn0030791 552.37 33.83666667 51.63333333 0.02534533 0.41375234 0.271142673 7 1 4 0.15 dme-miR-276a-3p 6mer2-7 GTTCCT X 16798613 16798618 - X_16798613_16798618_- 0.999555882 0.999999992 0.999777937 0.000314026 CG9132 FBtr0074353|FBtr0074354|FBtr0306801 16796900|16797514|16797514 16798632|16798632|16798632 X - 16798560 16798628 3'utr CG9132 FlyBase G68273.1 ACATCATCCTGTTCCTCCTGCTGCTGCTGCTGCTGCGCTCCTATCACCCAGAACTTTATGTTTTAAGAC 19 16798619 0.765540447 8 17 152 0.888888889 0.903089987 0.074074074 0.315789474 0.518518519 19 1 2 24 X:16798560-16798628 6 CG9132 FBtr0306801|FBtr0074353|FBtr0074354 16797514|16796900|16797514 16798632|16798632|16798632 GTTCCT 6mer2-7 dme-miR-276a-3p X - 16798583 16798635 stop_codon CG9132 FlyBase G51379.1 TAGATATACATCATCCTGTTCCTCCTGCTGCTGCTGCTGCTGCGCTCCTATCA 7 16798621 0.91438085 5 6 48 0.777777778 0.84509804 0.222222222 0.285714286 0.444444444 7 2 0 7 X:16798583-16798635 6 8 4054 FBgn0030791 552.37 33.83666667 51.63333333 0.014483046 0.236429908 0.15493867 1 3 2 0.15 dme-miR-304-5p 8mer-A1 TGAGATTA X 16826266 16826273 + X_16826266_16826273_+ 0.614111705 0.614079447 0.614095576 2.28E-05 CG4829 FBtr0335278|FBtr0112994|FBtr0074336|FBtr0112995|FBtr0074338|FBtr0074337 16826137|16826137|16826137|16826137|16826137|16826137 16826494|16826494|16826494|16826494|16826494|16826494 X + 16826242 16826291 3'utr CG4829 FlyBase G62306.1 CACACACGCACGGAAACATTGCATTGAGATTAGAGTAGAACTGCCCGAAA 27 16826265 0.971224266 5 27 157 1 1.431363764 0.444444444 0 0 27 0 0 27 X:16826242-16826291 8 CG4829 FBtr0074338|FBtr0074337|FBtr0074336|FBtr0112995|FBtr0335278|FBtr0112994 16826137|16826137|16826137|16826137|16826137|16826137 16826494|16826494|16826494|16826494|16826494|16826494 TGAGATTA 8mer-A1 dme-miR-304-5p X + 16826241 16826285 3'utr CG4829 FlyBase G47043.1 ACACACACGCACGGAAACATTGCATTGAGATTAGAGTAGAACTGC 21 16826265 0.968202391 4 21 117 1 1.579783597 0.394736842 0.571428571 0.763157895 21 0 0 38 X:16826241-16826285 8 24 4055 FBgn0030796 2560.61 104.38 159.97 0.009372767 0.229929105 0.15002813 1 1 1 0.15 dme-miR-304-5p 6mer2-7 GAGATT X 16827323 16827328 - X_16827323_16827328_- 0.975445889 0.982692101 0.979068995 0.005123837 CG13004 FBtr0112996|FBtr0308682|FBtr0074351 16826679|16826679|16826679 16827398|16827398|16827398 X - 16827252 16827391 3'utr CG13004 FlyBase G68283.1 GTGGTGGCGAGGGAGGGAGTTGAATGGAACTAATGGAGCAGTAGATGGAGGAGAGAGAATTAAGAGATTTTTTCCCAACTGGCAGCGCAACGGATTTCTGTACTTGACCCACTTAAAATAACCATATGCAAAAAAAACTG 633 16827321 0.983165853 23 560 4273 0.882014388 1.833217965 0.381294964 0.088467615 0.169784173 633 74 8 613 X:16827252-16827391 6 CG13004 FBtr0112996|FBtr0074351|FBtr0308682|FBtr0304152 16826679|16826679|16826679|16827115 16827398|16827398|16827398|16827398 GAGATT 6mer2-7 dme-miR-304-5p X - 16827224 16827389 3'utr CG13004 FlyBase G51388.1 GGTGGCGAGGGAGGGAGTTGAATGGAACTAATGGAGCAGTAGATGGAGGAGAGAGAATTAAGAGATTTTTTCCCAACTGGCAGCGCAACGGATTTCTGTACTTGACCCACTTAAAATAACCATATGCAAAAAAAACTGTAACAACGACATCGATAAGTGGTGTTCT 394 16827321 0.980725651 21 350 2543 0.881602914 1.906694111 0.43715847 0.314720812 0.508196721 394 60 5 484 X:16827224-16827389 6 394.5 4056 FBgn0030797 333.0633333 17.96666667 27.55 1.184459412 21.95732839 14.31941924 -7 -7 -7 0.15 dme-miR-999-3p 8mer-A1 AGTTAACA X 16885831 16885838 + X_16885831_16885838_+ 0.610079245 0.63604204 0.623060642 0.018358472 Rcp FBtr0074341 16885515 16885859 X + 16885804 16885846 3'utr Rcp FlyBase G62309.1 GGAACAGACAGGGAATGTATTATGCTTAGTTAACAATAAAGCT 11 16885823 0.98298179 2 11 86 1 1.041392685 0 0 0 11 0 0 11 X:16885804-16885846 8 Rcp FBtr0074341 16885515 16885859 AGTTAACA 8mer-A1 dme-miR-999-3p X + 16885802 16885839 3'utr Rcp FlyBase G47046.1 CTGGAACAGACAGGGAATGTATTATGCTTAGTTAACAA 6 16885823 0.983245378 3 6 46 1 1.079181246 0 0.833333333 0.916666667 6 0 0 12 X:16885802-16885839 8 7.5 4057 FBgn0030801 124.5266667 14.28333333 21.93 0.060228064 0.525087515 0.341997264 8 8 8 0.15 dme-miR-184-5p 6mer3-8 TGATAA X 16888280 16888285 + X_16888280_16888285_+ 0.985399846 0.999999978 0.992699912 0.0103239 CG4880 FBtr0074342|FBtr0310519 16888233|16888233 16888729|16888597 X + 16888251 16888289 3'utr CG4880 FlyBase G62315.1 ACGTTTTAGACAATTCTGCAAACCAGTCGTGATAAATTT 12 16888277 0.968174902 5 11 67 0.846153846 1.041392685 0 0.083333333 0.153846154 12 2 0 11 X:16888251-16888289 6 CG4880 FBtr0074342|FBtr0310519 16888233|16888233 16888729|16888597 TGATAA 6mer3-8 dme-miR-184-5p X + 16888251 16888290 3'utr CG4880 FlyBase G47049.1 ACGTTTTAGACAATTCTGCAAACCAGTCGTGATAAATTTA 8 16888278 0.781788114 5 8 58 1 1.146128036 0 0.5 0.714285714 8 0 0 14 X:16888251-16888290 6 9 4058 FBgn0030803 567.3333333 44.24666667 68.27666667 0.01586369 0.203405153 0.131816628 3 2 2.5 0.15 dme-miR-317-3p 6mer3-8 TGTGTT X 16937154 16937159 + X_16937154_16937159_+ 0.999990267 0.999998682 0.999994474 5.94E-06 CG4928 FBtr0074345|FBtr0074344 16936676|16936676 16938209|16937411 X + 16937144 16937178 5'utr CG4928 FlyBase G62329.1 AAATCCTTTGTGTGTTAGTCTAGGTGTAAGCACAC 5 16937157 0.720739342 3 4 41 1 0.84509804 0.285714286 0.2 0.428571429 5 0 0 7 X:16937144-16937178 6 CG4928 FBtr0074345|FBtr0074344 16936676|16936676 16938209|16937411 TGTGTT 6mer3-8 dme-miR-317-3p X + 16937141 16937171 5'utr CG4928 FlyBase G47056.1 TGCAAATCCTTTGTGTGTTAGTCTAGGTGTA 5 16937156 0.630679204 4 4 42 0.833333333 0.698970004 0.833333333 0.2 0.333333333 5 1 0 5 X:16937141-16937171 6 4 4059 FBgn0027556 126.41 4.513333333 6.916666667 0.031643066 0.886262925 0.578313253 -3 -2 -2.5 0.15 dme-miR-1003-3p 7mer-A1 TGTGAGA X 16938168 16938174 + X_16938168_16938174_+ 0.821189468 0.820757605 0.820973536 0.000305399 CG4928 FBtr0074345 16936676 16938209 X + 16938138 16938185 3'utr CG4928 FlyBase G62332.1 AATGGAAAAAATACACGCACATAACAAATTTGTGAGAAAAAAAATTAC 13 16938167 0.948106588 4 12 48 0.9375 1.176091259 0 0.230769231 0.375 13 1 0 15 X:16938138-16938185 7 CG4928 FBtr0074345 16936676 16938209 TGTGAGA 7mer-A1 dme-miR-1003-3p X + 16938152 16938183 3'utr CG4928 FlyBase G47058.1 ACGCACATAACAAATTTGTGAGAAAAAAAATT 12 16938166 0.919781942 2 12 49 1 1.278753601 0 0.333333333 0.578947368 12 0 0 19 X:16938152-16938183 7 11.5 4060 FBgn0027556 126.41 4.513333333 6.916666667 0.090973815 2.548005908 1.662650602 1 2 1.5 0.15 dme-miR-14-3p 7mer-m8 AAGACTG X 16938531 16938537 - X_16938531_16938537_- 0.667822168 0.665022 0.666422084 0.00198004 wus FBtr0074418|FBtr0342974 16938494|16938242 16938752|16938752 X - 16938506 16938593 3'utr wus FlyBase G68308.1 TAGCTGTATCTGTTTCCACATGTATTTATTACCATAAATCTGCGTTGTTTATTGTCAAGACTGTGTTTAAAAATATTAAAGCACCCCA 7 16938555 0.986654004 5 7 73 1 1 0.1 0.285714286 0.5 7 0 0 10 X:16938506-16938593 7 wus FBtr0074418|FBtr0342974 16938494|16938242 16938752|16938752 AAGACTG 7mer-m8 dme-miR-14-3p X - 16938523 16938555 3'utr wus FlyBase G51402.1 TCTGCGTTGTTTATTGTCAAGACTGTGTTTAAA 5 16938530 0.805695826 2 5 48 1 0.698970004 0.2 0 0 5 0 0 5 X:16938523-16938555 7 4 4061 FBgn0030805 139 7.906666667 12.04333333 0.028776978 0.505902192 0.332133961 18 -7 5.5 0.15 dme-miR-277-3p 7mer-m8 TGCATTT X 16955511 16955517 + X_16955511_16955517_+ 0.620199203 0.620203408 0.620201306 2.97E-06 RhoGAP15B FBtr0110990|FBtr0290096 16955463|16955463 16955995|16956234 X + 16955459 16955572 stop_codon RhoGAP15B FlyBase G62359.1 AAGTAGAAGTGCCCTCTCCCAGCTGCCAAACATAGATTTAACCGCCGTCTTGTGCATTTTTCTGTAGATATTCTGAATTTATTCGCAATATTAGGGAATATATACGTTTAGCAA 51 16955508 0.901497505 19 49 495 0.952380952 1.77815125 0.238095238 0.176470588 0.333333333 51 3 0 60 X:16955459-16955572 7 RhoGAP15B FBtr0290096|FBtr0110990 16955463|16955463 16956234|16955995 TGCATTT 7mer-m8 dme-miR-277-3p X + 16955464 16955600 3'utr RhoGAP15B FlyBase G47072.1 GAAGTGCCCTCTCCCAGCTGCCAAACATAGATTTAACCGCCGTCTTGTGCATTTTTCTGTAGATATTCTGAATTTATTCGCAATATTAGGGAATATATACGTTTAGCAATATTTTTACGAACAATTTCGGGAATTTT 36 16955508 0.989428055 14 32 353 0.927272727 1.40654018 0.145454545 0.416666667 0.618181818 36 3 1 51 X:16955464-16955600 7 31.5 4062 FBgn0030808 1485.72 31.16 47.79666667 0.021201842 1.010911425 0.659041774 3 3 3 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 16955677 16955682 + X_16955677_16955682_+ 0.99999994 0.999992642 0.999996291 5.16E-06 RhoGAP15B FBtr0110990|FBtr0290096 16955463|16955463 16955995|16956234 X + 16955657 16955694 3'utr RhoGAP15B FlyBase G62360.1 ATAATCACGTTTGATCAAATACCAAATTGTACATAAGC 15 16955684 0.62908066 5 14 92 0.941176471 1.204119983 0.058823529 0.133333333 0.235294118 15 1 0 16 X:16955657-16955694 6 RhoGAP15B FBtr0290096|FBtr0110990 16955463|16955463 16956234|16955995 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 16955648 16955697 3'utr RhoGAP15B FlyBase G47073.1 TTTCTGTAAATAATCACGTTTGATCAAATACCAAATTGTACATAAGCTTA 10 16955684 0.981726887 5 10 74 1 1.255272505 0.055555556 0.6 0.777777778 10 0 0 18 X:16955648-16955697 6 12.5 4063 FBgn0030808 1485.72 31.16 47.79666667 0.008413429 0.401155327 0.261524514 -7 -7 -7 0.15 dme-miR-190-5p 8mer-m1 ACATATCT X 16955758 16955765 + X_16955758_16955765_+ 0.560806835 0.541497067 0.551151951 0.01365402 RhoGAP15B FBtr0110990|FBtr0290096 16955463|16955463 16955995|16956234 X + 16955720 16955770 3'utr RhoGAP15B FlyBase G62361.1 AGTATATGCCCTTTGTCTTCAACATAGCTCGATATCTGACATATCTAGTGT 15 16955745 0.986126358 6 9 116 0.666666667 0.77815125 0.222222222 0.133333333 0.277777778 15 5 1 12 X:16955720-16955770 8 RhoGAP15B FBtr0290096|FBtr0110990 16955463|16955463 16956234|16955995 ACATATCT 8mer-m1 dme-miR-190-5p X + 16955713 16955779 3'utr RhoGAP15B FlyBase G47074.1 ATATCTAAGTATATGCCCTTTGTCTTCAACATAGCTCGATATCTGACATATCTAGTGTTTATCTACA 18 16955732 0.984737045 8 10 136 0.615384615 0.602059991 0.230769231 0.333333333 0.538461538 18 7 3 16 X:16955713-16955779 8 8 4064 FBgn0030808 1485.72 31.16 47.79666667 0.005384595 0.256739409 0.167375689 13 26 19.5 0.15 dme-miR-283-5p 7mer-m8 TGATATT X 16956237 16956243 - X_16956237_16956243_- 0.57368215 0.431984062 0.502833106 0.100195687 CG9086 FBtr0346190 16956230 16957493 X - 16956234 16956262 3'utr CG9086 FlyBase G68314.1 AATAAATGCAACATTTTAGTGATATTCAA 14 16956248 0.72033572 6 13 107 0.947368421 1.255272505 0.210526316 0.285714286 0.473684211 14 1 0 18 X:16956234-16956262 7 CG9086 FBtr0346190 16956230 16957493 TGATATT 7mer-m8 dme-miR-283-5p X - 16956235 16956260 3'utr CG9086 FlyBase G51405.1 TAAATGCAACATTTTAGTGATATTCA 13 16956247 0.694127278 3 13 97 1 1.204119983 0.25 0.230769231 0.375 13 0 0 16 X:16956235-16956260 7 12.5 4065 FBgn0030809 889.67 15.31666667 23.47 0.014050153 0.816104461 0.532594802 5 4 4.5 0.15 dme-miR-13b-2-5p 6mer3-8 TTTGAC X 16956622 16956627 - X_16956622_16956627_- 0.999725525 0.999999358 0.999862442 0.000193677 CG9086 FBtr0346190 16956230 16957493 X - 16956529 16956639 3'utr CG9086 FlyBase G68316.1 TTCAGAGCCCTGTTTGACATCCATCTCACTCTAACCCGAGGAACTCGATAATATTAGTCAAACCATGTTTACTTGATCAATATACTTAACACCCTATACGACTATATATTT 15 16956625 0.984174298 10 14 102 0.9375 1.176091259 0.25 0.066666667 0.125 15 1 0 15 X:16956529-16956639 6 CG9086 FBtr0346190 16956230 16957493 TTTGAC 6mer3-8 dme-miR-13b-2-5p X - 16956607 16956654 3'utr CG9086 FlyBase G51407.1 ACAGACACCCTCTCTTTCAGAGCCCTGTTTGACATCCATCTCACTCTA 5 16956626 0.964289719 4 5 27 1 0.903089987 0 0.4 0.625 5 0 0 8 X:16956607-16956654 6 6 4066 FBgn0030809 889.67 15.31666667 23.47 0.006744074 0.391730141 0.255645505 -2 -1 -1.5 0.15 dme-miR-308-3p 7mer-m1 TGTGATT X 16957424 16957430 - X_16957424_16957430_- 0.443124707 0.443131014 0.44312786 4.45E-06 CG9086 FBtr0346190|FBtr0074415|FBtr0308839 16956230|16956943|16956943 16957493|16957493|16957493 X - 16957386 16957473 3'utr CG9086 FlyBase G68321.1 GGAAGCAGAGGACAGGCAGCAAAATGGAAATGGCGGCAGTCTATGTGATTATTACATACTAACATTAGGAGAGCCTATTTTTACGTCT 87 16957424 0.985897983 12 81 647 0.932038835 1.505149978 0.194174757 0.149425287 0.281553398 87 5 2 96 X:16957386-16957473 7 CG9086 FBtr0074415|FBtr0308839|FBtr0346190 16956943|16956943|16956230 16957493|16957493|16957493 TGTGATT 7mer-m1 dme-miR-308-3p X - 16957365 16957453 3'utr CG9086 FlyBase G51411.1 AAAATGGAAATGGCGGCAGTCTATGTGATTATTACATACTAACATTAGGAGAGCCTATTTTTACGTCTAAGCATTTTACTACTTATCCG 56 16957424 0.985419332 13 53 435 0.96 1.556302501 0.133333333 0.25 0.44 56 2 1 72 X:16957365-16957453 7 65.5 4067 FBgn0030809 889.67 15.31666667 23.47 0.073622804 4.276387378 2.790796762 -6 -6 -6 0.15 dme-miR-14-3p 7mer-m8 AAGACTG X 17079812 17079818 + X_17079812_17079818_+ 0.671705448 0.671727736 0.671716592 1.58E-05 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 X + 17079767 17079843 3'utr CG4949 FlyBase G62366.1 AAAGCTGGAACGAATTTTCCAATCTCGAACGAATTTCGAGTTATTAAGACTGCATTTCCATTTTATTGACTTAAAGC 46 17079810 0.875800685 12 43 407 0.951612903 1.770852012 0.016129032 0.260869565 0.451612903 46 3 0 59 X:17079767-17079843 7 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 AAGACTG 7mer-m8 dme-miR-14-3p X + 17079797 17079844 3'utr CG4949 FlyBase G47078.1 GAATTTCGAGTTATTAAGACTGCATTTCCATTTTATTGACTTAAAGCT 22 17079810 0.988156665 7 21 191 0.931034483 0.954242509 0 0.318181818 0.482758621 22 0 2 27 X:17079797-17079844 7 29.5 4068 FBgn0030813 105.3333333 6.336666667 9.69 0.280063291 4.655444503 3.044375645 2 2 2 0.15 dme-miR-14-3p 6mer3-8 AAGACT X 17080072 17080077 + X_17080072_17080077_+ 0.999935205 0.999999997 0.999967601 4.58E-05 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 X + 17080053 17080091 3'utr CG4949 FlyBase G62367.1 CGAATGCTCGATCAAATATAAGACTTTATTATAGTATAC 24 17080080 0.603818201 6 23 212 0.96875 1.190331698 0.03125 0.25 0.4375 24 0 1 31 X:17080053-17080091 6 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 AAGACT 6mer3-8 dme-miR-14-3p X + 17080045 17080091 3'utr CG4949 FlyBase G47079.1 GAAGCAATCGAATGCTCGATCAAATATAAGACTTTATTATAGTATAC 16 17080080 0.712191201 4 14 127 0.954545455 1.322219295 0.181818182 0.25 0.454545455 16 1 0 21 X:17080045-17080091 6 19 4069 FBgn0030813 105.3333333 6.336666667 9.69 0.180379747 2.998421883 1.960784314 -8 -8 -8 0.15 dme-bantam-3p 8mer-A1 TGATCTCA X 17080449 17080456 + X_17080449_17080456_+ 0.630384262 0.630759761 0.630572012 0.000265519 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 X + 17080394 17080470 3'utr CG4949 FlyBase G62369.1 GATTGGAATCCGATCTCCGCATCCCAGCCTCATATGTAGTCCAGCATGCCGCTTATGATCTCAAAGGCATCCCGAGC 30 17080449 0.974939437 6 30 186 1 1.51851394 0.696969697 0.1 0.181818182 30 0 0 33 X:17080394-17080470 8 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 TGATCTCA 8mer-A1 dme-bantam-3p X + 17080429 17080460 3'utr CG4949 FlyBase G47081.1 GTAGTCCAGCATGCCGCTTATGATCTCAAAGG 10 17080448 0.689326875 3 9 61 0.9 1.255272505 0.7 0.7 0.85 10 2 0 18 X:17080429-17080460 8 19 4070 FBgn0030813 105.3333333 6.336666667 9.69 0.180379747 2.998421883 1.960784314 0 1 0.5 0.15 dme-miR-304-5p 7mer-m8 TGAGATT X 17135343 17135349 + X_17135343_17135349_+ 0.487022933 0.558770178 0.522896555 0.050733002 CG5004 FBtr0302375|FBtr0346797|FBtr0343201|FBtr0302377|FBtr0074386|FBtr0302376 17135120|17135120|17135120|17135120|17135120|17135120 17135988|17135988|17135988|17135988|17135988|17135988 X + 17135272 17135396 3'utr CG5004 FlyBase G62388.2 AGCTGCTCAACAAGGACACGGGCAAAAGGAACCTAAAACTATCTTTTTTTTTTTGGCGAACTAACGAAATCTGAGATTTCAGAACTGGACCAAAGTCAAGAACGTATTTTTTAGACCTAAAAATT 51 17135342 0.944854379 18 44 247 0.893939394 1.16879202 0.333333333 0.196078431 0.378787879 51 4 3 59 X:17135272-17135396 7 CG5004 FBtr0074386|FBtr0302376|FBtr0343201|FBtr0302377|FBtr0302375|FBtr0346797 17135120|17135120|17135120|17135120|17135120|17135120 17135988|17135988|17135988|17135988|17135988|17135988 TGAGATT 7mer-m8 dme-miR-304-5p X + 17135328 17135392 3'utr CG5004 FlyBase G47092.1 CGAACTAACGAAATCTGAGATTTCAGAACTGGACCAAAGTCAAGAACGTATTTTTTAGACCTAAA 30 17135367 0.821591454 9 24 143 0.780487805 1.028028724 0.146341463 0.333333333 0.512195122 30 7 2 32 X:17135328-17135392 7 17.5 4071 FBgn0260748 2353.313333 97.35 148.4233333 0.007436324 0.179763739 0.11790599 1 -24 -11.5 0.15 dme-miR-980-5p 7mer-A1 AAAAACA X 17135473 17135479 + X_17135473_17135479_+ 0.626261498 0.780160642 0.70321107 0.108823097 CG5004 FBtr0302375|FBtr0346797|FBtr0343201|FBtr0302377|FBtr0074386|FBtr0302376 17135120|17135120|17135120|17135120|17135120|17135120 17135988|17135988|17135988|17135988|17135988|17135988 X + 17135444 17135528 3'utr CG5004 FlyBase G62390.1 ATGTCTAGATTTAGAAACGATTGTAAGTCAAAAACAGTCCCATGCTACTAACACCGCCATTCTAAAACCTAATCATACAACAGAT 100 17135486 0.722840128 13 86 467 0.901639344 2.041392685 0.049180328 0.13 0.286885246 100 12 0 110 X:17135444-17135528 7 CG5004 FBtr0074386|FBtr0302376|FBtr0343201|FBtr0302377|FBtr0302375|FBtr0346797 17135120|17135120|17135120|17135120|17135120|17135120 17135988|17135988|17135988|17135988|17135988|17135988 AAAAACA 7mer-A1 dme-miR-980-5p X + 17135436 17135602 3'utr CG5004 FlyBase G47093.1 CTATTTTTATGTCTAGATTTAGAAACGATTGTAAGTCAAAAACAGTCCCATGCTACTAACACCGCCATTCTAAAACCTAATCATACAACAGATTTTGAAATTCTTGCTTATTAGGACGGCCTGGTATCAAAGGCAAGCATCTATATGATCGCATATATATCATAAAC 102 17135486 0.770977062 24 86 542 0.882352941 2.130333768 0.091503268 0.382352941 0.588235294 102 18 0 135 X:17135436-17135602 7 55.5 4072 FBgn0260748 2353.313333 97.35 148.4233333 0.02358377 0.570107858 0.373930424 -13 -13 -13 0.15 dme-miR-1006-3p 7mer-A1 GAATTTA X 17135692 17135698 + X_17135692_17135698_+ 0.798253181 0.767473672 0.782863426 0.021764393 CG5004 FBtr0302375|FBtr0346797|FBtr0343201|FBtr0302377|FBtr0074386|FBtr0302376 17135120|17135120|17135120|17135120|17135120|17135120 17135988|17135988|17135988|17135988|17135988|17135988 X + 17135639 17135744 3'utr CG5004 FlyBase G62391.1 ACGATTTAAAAGTAACTACCAAAATGACTCTTGAACACTTGAAGTTTCATCGTGAATTTACCCAATAACGTTATAATATTGTATGCCTATCTATTATATTTTATGA 170 17135696 0.980405892 16 166 1211 0.980487805 2.002166062 0.112195122 0.182352941 0.32195122 170 3 1 201 X:17135639-17135744 7 CG5004 FBtr0074386|FBtr0302376|FBtr0343201|FBtr0302377|FBtr0302375|FBtr0346797 17135120|17135120|17135120|17135120|17135120|17135120 17135988|17135988|17135988|17135988|17135988|17135988 GAATTTA 7mer-A1 dme-miR-1006-3p X + 17135642 17135712 3'utr CG5004 FlyBase G47094.1 ATTTAAAAGTAACTACCAAAATGACTCTTGAACACTTGAAGTTTCATCGTGAATTTACCCAATAACGTTAT 135 17135696 0.749939276 11 135 972 1 2.28780173 0.077319588 0.340740741 0.541237113 135 0 0 194 X:17135642-17135712 7 106.5 4073 FBgn0260748 2353.313333 97.35 148.4233333 0.045255342 1.093990755 0.717542165 -4 -4 -4 0.15 dme-miR-14-3p 6mer3-8 AAGACT X 17135834 17135839 + X_17135834_17135839_+ 0.836291397 0.89964114 0.867966269 0.044795002 CG5004 FBtr0302375|FBtr0346797|FBtr0343201|FBtr0302377|FBtr0074386|FBtr0302376 17135120|17135120|17135120|17135120|17135120|17135120 17135988|17135988|17135988|17135988|17135988|17135988 X + 17135769 17135904 3'utr CG5004 FlyBase G62392.1 ATGTATAATTGGTACAATCCAATCGAGAGATAGGGGGGTCAAATTATTTGCCCATCGCTACGCGTAAGACTAAAACTGAACGATTTGCTCAGGCAGCTGGAAAGGATAATCAAAAGCAAGAGAATAACTGAGAAAC 244 17135833 0.905640922 17 229 1028 0.92936803 1.698970004 0.226765799 0.094262295 0.178438662 244 15 4 250 X:17135769-17135904 6 CG5004 FBtr0074386|FBtr0302376|FBtr0343201|FBtr0302377|FBtr0302375|FBtr0346797 17135120|17135120|17135120|17135120|17135120|17135120 17135988|17135988|17135988|17135988|17135988|17135988 AAGACT 6mer3-8 dme-miR-14-3p X + 17135816 17135915 3'utr CG5004 FlyBase G47095.2 TTGCCCATCGCTACGCGTAAGACTAAAACTGAACGATTTGCTCAGGCAGCTGGAAAGGATAATCAAAAGCAAGAGAATAACTGAGAAACACTAAACTAAT 174 17135833 0.94779885 12 157 666 0.908088235 1.489606966 0.319852941 0.41954023 0.628676471 174 18 7 247 X:17135816-17135915 6 139.5 4074 FBgn0260748 2353.313333 97.35 148.4233333 0.059278124 1.432973806 0.939879174 1 1 1 0.15 dme-miR-317-5p 6mer2-7 TATCCC X 17150398 17150403 + X_17150398_17150403_+ 1 0.999996005 0.999998002 2.83E-06 CG5010 FBtr0343291|FBtr0074387 17150298|17150298 17150647|17150647 X + 17150277 17150526 stop_codon CG5010 FlyBase G62399.1 AGCAGAGCCACCATCTCCAGTAGAGGGCCCAGCTCCGGTAGAATATCATCTGGCCAAGCACCGGCGGATGAACGCAGCCGGATGAACCCATCGGATGAACACCTCCGGATGAACTCTGTCCTATCCCTTCGTTTAGTTCTTAATTGTTTAATTGCAAGCATCTGAAAGAAAGCATTGTTTAATTGTAGTGCAAAATGAAATGTTAAATAGAAAATCCCGTTGGCAGCCCAAAACCCTTTCCAAAAAAAAA 111 17150398 0.999986539 32 107 651 0.965034965 2.139879086 0.251748252 0.198198198 0.377622378 111 5 0 138 X:17150277-17150526 6 CG5010 FBtr0343291|FBtr0074387 17150298|17150298 17150647|17150647 TATCCC 6mer2-7 dme-miR-317-5p X + 17150352 17150423 3'utr CG5010 FlyBase G47099.1 AGCCGGATGAACCCATCGGATGAACACCTCCGGATGAACTCTGTCCTATCCCTTCGTTTAGTTCTTAATTGT 34 17150398 0.982637935 11 31 228 0.928571429 1.716003344 0.035714286 0.382352941 0.625 34 4 0 52 X:17150352-17150423 6 32.5 4075 FBgn0260747 667.7266667 81.68 125.22 0.048672611 0.397894221 0.259543204 0 0 0 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 17241577 17241583 - X_17241577_17241583_- 0.774750592 0.769933052 0.772341822 0.003406487 CG8915 FBtr0339780|FBtr0339780|FBtr0339780|FBtr0074447|FBtr0074447|FBtr0074447 17240466|17240466|17240466|17241265|17241265|17241265 17241817|17241817|17241817|17241817|17241817|17241817 X - 17241563 17241657 3'utr CG8915 FlyBase G68397.1 TCCACTGCACTTCTTACATATTAAGGTATATCTAAGGTAGCACACACGATATCTTAACTATATTCCTTACATGTTGTGATACAAGAAGGCGCAAA 84 17241584 0.95910057 9 77 554 0.907407407 1.146128036 0.018518519 0.238095238 0.407407407 84 4 6 98 X:17241563-17241657 7 CG8915 FBtr0339780|FBtr0339780|FBtr0339780|FBtr0074447|FBtr0074447|FBtr0074447 17240466|17240466|17240466|17241265|17241265|17241265 17241817|17241817|17241817|17241817|17241817|17241817 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 17241565 17241623 3'utr CG8915 FlyBase G51462.1 AGGTAGCACACACGATATCTTAACTATATTCCTTACATGTTGTGATACAAGAAGGCGCA 54 17241585 0.981921612 9 48 364 0.87654321 0.897015839 0 0.388888889 0.592592593 54 2 8 71 X:17241565-17241623 7 64 4076 FBgn0030833 168.33 5.216666667 8 0.380205549 12.26837061 8 1 2 1.5 0.15 dme-miR-79-3p 7mer-A1 AGCTTTA X 17305161 17305167 + X_17305161_17305167_+ 0.822868962 0.823291837 0.823080399 0.000298965 CG5445 FBtr0074427|FBtr0074428|FBtr0339777|FBtr0339778|FBtr0074425 17304836|17304836|17304836|17304836|17304836 17305475|17305475|17305475|17305475|17305475 X + 17305144 17305198 3'utr CG5445 FlyBase G62414.1 TCGGTGTCAGACAGATCAGCTTTATATATATATATCGATATGTCGCGAAGGGAGC 23 17305159 0.97624235 6 18 164 0.848484848 1.447158031 0.121212121 0.347826087 0.545454545 23 5 0 28 X:17305144-17305198 7 CG5445 FBtr0339778|FBtr0074425|FBtr0074428|FBtr0339777|FBtr0074427 17304836|17304836|17304836|17304836|17304836 17305475|17305475|17305475|17305475|17305475 AGCTTTA 7mer-A1 dme-miR-79-3p X + 17305131 17305189 3'utr CG5445 FlyBase G47110.1 CCACTCCTTAATTTCGGTGTCAGACAGATCAGCTTTATATATATATATCGATATGTCGC 10 17305159 0.985392029 4 10 83 1 1.113943352 0.153846154 0.3 0.461538462 10 0 0 13 X:17305131-17305189 7 14.5 4077 FBgn0030838 342.0933333 22.24 33.86 0.042386093 0.651978417 0.428233904 2 2 2 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT X 17456851 17456857 - X_17456851_17456857_- 0.658856814 0.612509954 0.635683384 0.032772137 CG43658 FBtr0310336|FBtr0310337|FBtr0342803|FBtr0342802|FBtr0310338|FBtr0310339|FBtr0310335|FBtr0330597 17456555|17456555|17456555|17456555|17456555|17456167|17456555|17456555 17458220|17458220|17458220|17457905|17458220|17458220|17458220|17457905 X - 17456836 17456916 3'utr CG43658 FlyBase G68422.1 CGACCATGTGCAGCACTTCTTATCGGTTTTTCTCAAGCTTTTCGAAGCGAAAACTCTGAGGCAGCTGGCAGCACTTTCCTT 16 17456861 0.942799889 6 15 67 0.944444444 1.230448921 0.166666667 0.125 0.222222222 16 1 0 17 X:17456836-17456916 7 CG43658 FBtr0342802|FBtr0342803|FBtr0310337|FBtr0310336|FBtr0330597|FBtr0310335|FBtr0310339|FBtr0310338 17456555|17456555|17456555|17456555|17456555|17456555|17456167|17456555 17457905|17458220|17458220|17458220|17457905|17458220|17458220|17458220 GGCAGCT 7mer-m8 dme-miR-980-3p X - 17456841 17456873 3'utr CG43658 FlyBase G51474.1 GAAGCGAAAACTCTGAGGCAGCTGGCAGCACTT 6 17456861 0.793668973 2 6 14 1 0.903089987 0.5 0.166666667 0.375 6 0 0 8 X:17456841-17456873 7 10 4078 FBgn0263706 341.6233333 5.406666667 8.273333333 0.029272005 1.849568434 1.208702659 4 4 4 0.15 dme-miR-970-3p 6mer2-7 CTTATG X 17605918 17605923 + X_17605918_17605923_+ 0.721058158 0.677668612 0.699363385 0.03068108 X11L FBtr0340620|FBtr0340621|FBtr0333757|FBtr0301696|FBtr0074451 17605308|17605308|17605308|17605308|17605308 17606100|17606879|17606100|17606879|17606100 X + 17605898 17605951 3'utr X11L FlyBase G62436.1 AGAAACAAAAAGCAACACACCTTATGCCAAAAAAGATTAGATTTCGTTAAACTT 60 17605922 0.946270296 5 58 245 0.971428571 1.832508913 0.057142857 0.166666667 0.285714286 60 2 0 68 X:17605898-17605951 6 X11L FBtr0340621|FBtr0333757|FBtr0301696|FBtr0074451|FBtr0340620 17605308|17605308|17605308|17605308|17605308 17606879|17606100|17606879|17606100|17606100 CTTATG 6mer2-7 dme-miR-970-3p X + 17605903 17606025 3'utr X11L FlyBase G47123.1 CAAAAAGCAACACACCTTATGCCAAAAAAGATTAGATTTCGTTAAACTTATTATTGTATAGAGCCATTGCGGATAATTATTGCAATACCATTACCGATATTTATTATTAAAAATAGCCTTAGA 44 17605922 0.963866018 9 42 224 0.948275862 1.740362689 0.189655172 0.272727273 0.448275862 44 3 0 55 X:17605903-17606025 6 42 4079 FBgn0026313 772.0566667 18.08 27.68333333 0.054400152 2.32300885 1.517158338 -4 -4 -4 0.15 dme-miR-8-3p 7mer-m8 CAGTATT X 17623353 17623359 - X_17623353_17623359_- 0.659116791 0.659598631 0.659357711 0.000340684 stas FBtr0074487 17623219 17623694 X - 17623328 17623423 3'utr stas FlyBase G68462.1 ACTTTTGCATCATATATTTCCATCAATCGTTTTTAAGTTAGTGAATTTTTGTTTAGTGCTATTGCAGTATTTACTAGAAAAGTTCTCCTCTAAGTA 112 17623362 0.83031074 8 111 1260 0.9921875 2.103803721 0.234375 0.142857143 0.25 112 1 0 127 X:17623328-17623423 7 stas FBtr0074487 17623219 17623694 CAGTATT 7mer-m8 dme-miR-8-3p X - 17623333 17623538 3'utr stas FlyBase G51501.1 TTTTCGGAATGCCACTTTGGGTCTCGATCCACTATGTTTAAGACAACTACAAAATATCTGTGTTTATCCTATTATTAAAATTATTAATGTTTTCTGAACTTGTTCTTACCAAACAACTTTTGCATCATATATTTCCATCAATCGTTTTTAAGTTAGTGAATTTTTGTTTAGTGCTATTGCAGTATTTACTAGAAAAGTTCTCCTCT 110 17623362 0.990887901 21 104 1104 0.957055215 2.193124598 0.214723926 0.327272727 0.54601227 110 7 0 156 X:17623333-17623538 7 81.5 4080 FBgn0030850 1912.336667 122.8733333 188.6933333 0.042618019 0.663284683 0.43191775 3 3 3 0.15 dme-miR-305-3p 6mer3-8 ATGTGC X 17640474 17640479 - X_17640474_17640479_- 0.989056348 0.987784366 0.988420357 0.000899369 RhoGAPp190 FBtr0333661|FBtr0333659|FBtr0333662|FBtr0333660|FBtr0074482|FBtr0074483 17639145|17639145|17639145|17639145|17639145|17639145 17641617|17641617|17641617|17641617|17641617|17641617 X - 17640449 17640503 3'utr RhoGAPp190 FlyBase G68487.1 AATCTAATTTTCGAGCTAAACTAAATGTGCATCTCAGTGTGTGTGTCTGTCTGTA 61 17640477 0.870920746 7 57 547 0.944444444 1.531478917 0.277777778 0.163934426 0.291666667 61 3 1 68 X:17640449-17640503 6 RhoGAPp190 FBtr0333660|FBtr0333662|FBtr0074483|FBtr0074482|FBtr0333659|FBtr0333661 17639145|17639145|17639145|17639145|17639145|17639145 17641617|17641617|17641617|17641617|17641617|17641617 ATGTGC 6mer3-8 dme-miR-305-3p X - 17640449 17640493 3'utr RhoGAPp190 FlyBase G51518.1 TCGAGCTAAACTAAATGTGCATCTCAGTGTGTGTGTCTGTCTGTA 21 17640476 0.833026673 3 20 193 0.970588235 1.51851394 0.294117647 0.476190476 0.676470588 21 1 0 33 X:17640449-17640493 6 38 4081 FBgn0026375 866.7733333 14.19333333 21.75666667 0.043840758 2.677313293 1.746591083 -2 -3 -2.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT X 17640635 17640640 - X_17640635_17640640_- 1 0.996979675 0.998489837 0.002135675 RhoGAPp190 FBtr0074481|FBtr0333661|FBtr0333659|FBtr0333662|FBtr0333660|FBtr0074482|FBtr0074483 17640504|17639145|17639145|17639145|17639145|17639145|17639145 17641617|17641617|17641617|17641617|17641617|17641617|17641617 X - 17640573 17640664 3'utr RhoGAPp190 FlyBase G68488.1 TAAATACCACTAAATGTCTGTGTGTCTAGTATAGGAGAAAGTAGGAGAGGTGGAGCCGTAGGAGCAGGGGGAGGGGGAGAGAAAGGATGAGC 18 17640641 0.984977476 9 17 128 0.95 1.278753601 0.25 0.111111111 0.2 18 1 0 19 X:17640573-17640664 6 RhoGAPp190 FBtr0333660|FBtr0333662|FBtr0074483|FBtr0074482|FBtr0074481|FBtr0333659|FBtr0333661 17639145|17639145|17639145|17639145|17640504|17639145|17639145 17641617|17641617|17641617|17641617|17641617|17641617|17641617 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" X - 17640566 17640665 3'utr RhoGAPp190 FlyBase G51519.1 TTAAATACCACTAAATGTCTGTGTGTCTAGTATAGGAGAAAGTAGGAGAGGTGGAGCCGTAGGAGCAGGGGGAGGGGGAGAGAAAGGATGAGCGAAGCGA 8 17640640 0.9804256 5 8 53 1 1.176091259 0.4 0.625 0.8 8 0 0 15 X:17640566-17640665 6 10.5 4082 FBgn0026375 866.7733333 14.19333333 21.75666667 0.012113894 0.739783936 0.482610694 1 0 0.5 0.15 dme-miR-1002-5p 6mer3-8 CTACTT X 17641575 17641580 - X_17641575_17641580_- 0.509724041 0.94503919 0.727381616 0.30781433 RhoGAPp190 FBtr0074481|FBtr0333661|FBtr0333659|FBtr0333662|FBtr0333660|FBtr0074482|FBtr0074483 17640504|17639145|17639145|17639145|17639145|17639145|17639145 17641617|17641617|17641617|17641617|17641617|17641617|17641617 X - 17641563 17641693 stop_codon RhoGAPp190 FlyBase G68494.1 GGAGGACATTGTCCAGACAATGATTGACCAGTTCCCGTATCTGTTCTGCGGCAAGGATGCTTTTGTCATGGTCTAGGCCTAGATCCCCGCCAGGCCATGGCACACTTGGACTTCTACTTGACCGCCGGACG 22 17641587 0.979272593 8 19 122 0.88 1.342422681 0.16 0.136363636 0.24 22 3 0 22 X:17641563-17641693 6 RhoGAPp190 FBtr0333660|FBtr0333662|FBtr0074483|FBtr0074482|FBtr0074481|FBtr0333659|FBtr0333661 17639145|17639145|17639145|17639145|17640504|17639145|17639145 17641617|17641617|17641617|17641617|17641617|17641617|17641617 CTACTT 6mer3-8 dme-miR-1002-5p X - 17641554 17641602 3'utr RhoGAPp190 FlyBase G51524.1 AGGCCATGGCACACTTGGACTTCTACTTGACCGCCGGACGCGAAGCCAA 8 17641587 0.963624051 2 8 41 1 1.079181246 0.166666667 0.5 0.666666667 8 0 0 12 X:17641554-17641602 6 11 4083 FBgn0026375 866.7733333 14.19333333 21.75666667 0.012690746 0.775011743 0.505592156 7 7 7 0.15 dme-miR-318-3p 7mer-A1 CCAGTGA X 17668624 17668630 + X_17668624_17668630_+ 0.811389808 0.786491012 0.79894041 0.01760611 beta-Spec FBtr0334405 17667960 17669371 X + 17668568 17668660 3'utr beta-Spec FlyBase G62494.1 ATTGACCTTCCGCGGTGAGCCCAGCTACGATCTGCAAAACGCTGCCATCGAAATTGCCAGTGATTACACCAAGAAGAAGCACGTTCTGCGAGT 24 17668632 0.896149945 6 23 95 0.965517241 1.447158031 0.24137931 0.166666667 0.310344828 24 1 0 28 X:17668568-17668660 7 beta-Spec FBtr0334405 17667960 17669371 CCAGTGA 7mer-A1 dme-miR-318-3p X + 17668613 17668648 3'utr beta-Spec FlyBase G47158.1 CATCGAAATTGCCAGTGATTACACCAAGAAGAAGCA 9 17668632 0.954673847 2 8 36 0.928571429 1.113943352 0.285714286 0.444444444 0.642857143 9 1 0 13 X:17668613-17668648 7 13 4084 FBgn0250788 4584.71 71.70666667 109.7433333 0.002835512 0.181294161 0.118458221 -8 -8 -8 0.15 dme-miR-986-5p 6mer3-8 ATTCGA X 17668837 17668842 + X_17668837_17668842_+ 0.681350265 0.711542241 0.696446253 0.021348897 beta-Spec FBtr0334405 17667960 17669371 X + 17668801 17668858 3'utr beta-Spec FlyBase G62495.1 TGTCCCAGTGGGTGACCTCCCTGAAAGCCCAGAGCGATTCGACAGCGGTGGCCGCCAG 13 17668838 0.850856066 4 12 29 0.866666667 1.113943352 0.6 0.153846154 0.266666667 13 2 0 13 X:17668801-17668858 6 beta-Spec FBtr0334405 17667960 17669371 ATTCGA 6mer3-8 dme-miR-986-5p X + 17668806 17668863 3'utr beta-Spec FlyBase G47159.1 CAGTGGGTGACCTCCCTGAAAGCCCAGAGCGATTCGACAGCGGTGGCCGCCAGCAGAT 11 17668838 0.889042501 5 9 28 0.944444444 1.230448921 0.111111111 0.454545455 0.666666667 11 1 0 17 X:17668806-17668863 6 9.5 4085 FBgn0250788 4584.71 71.70666667 109.7433333 0.002072105 0.132484195 0.086565623 -1 -1 -1 0.15 dme-miR-980-3p 7mer-A1 GCAGCTA X 17668969 17668975 + X_17668969_17668975_+ 0.823273985 0.822921897 0.823097941 0.000248972 beta-Spec FBtr0334404|FBtr0074454|FBtr0334405 17668936|17668936|17667960 17669371|17669371|17669371 X + 17668943 17669050 3'utr beta-Spec FlyBase G62496.1 CAGCCGTAACGCAACCATAAGCAAGAGCAGCTAATTAAAACAAATAACAAATAACATGAAATGATATAATACAAATGCAAAACGACAACAAATTATACAGCAAAAATT 36 17668977 0.943899992 8 29 116 0.842105263 1.505149978 0 0.055555556 0.105263158 36 6 0 32 X:17668943-17669050 7 beta-Spec FBtr0334405|FBtr0074454|FBtr0334404 17667960|17668936|17668936 17669371|17669371|17669371 GCAGCTA 7mer-A1 dme-miR-980-3p X + 17668943 17668980 3'utr beta-Spec FlyBase G47160.1 CAGCCGTAACGCAACCATAAGCAAGAGCAGCTAATTAA 8 17668960 0.949219321 3 6 24 0.727272727 0.903089987 0 0.375 0.545454545 8 3 0 8 X:17668943-17668980 7 16 4086 FBgn0250788 4584.71 71.70666667 109.7433333 0.003489861 0.223131276 0.145794733 -8 9 0.5 0.15 dme-miR-33-5p 7mer-m1 AATGCAC X 17707476 17707482 - X_17707476_17707482_- 0.829691719 0.821949837 0.825820778 0.00547435 CG8173 FBtr0074475 17707399 17707634 X - 17707459 17707516 3'utr CG8173 FlyBase G68531.1 AACAAACCAATTACGGTTAAAGCCCCAAAACGCGAATGCACACTTAAGCAAATTGTAC 9 17707479 0.912550339 4 8 26 1 1 0.1 0.111111111 0.2 9 0 0 10 X:17707459-17707516 7 CG8173 FBtr0074475 17707399 17707634 AATGCAC 7mer-m1 dme-miR-33-5p X - 17707458 17707498 3'utr CG8173 FlyBase G51550.1 AAAGCCCCAAAACGCGAATGCACACTTAAGCAAATTGTACA 7 17707480 0.908424206 2 7 17 1 1.146128036 0.071428571 0.571428571 0.785714286 7 0 0 14 X:17707458-17707498 7 6.5 4087 FBgn0030864 922.93 68.84666667 105.6433333 0.007042788 0.094412705 0.061527782 -3 -2 -2.5 0.15 dme-miR-252-5p 8mer-m1 GTACTTAG X 17821339 17821346 - X_17821339_17821346_- 0.636727268 0.636755206 0.636741237 1.97E-05 Socs16D FBtr0310310|FBtr0074473 17820762|17820773 17822326|17822326 X - 17821279 17821382 3'utr Socs16D FlyBase G68544.1 AAAGCGAGCGAATTATGATATAACCATTAACGCATTGTACTTAGTTTAATCCATGTCATGTACACAAATGATCGATTGCCAGATGGAAAGAATGGCGAACACAC 43 17821347 0.982730105 8 42 317 0.982142857 1.740362689 0.053571429 0.279069767 0.446428571 43 1 0 55 X:17821279-17821382 8 Socs16D FBtr0074473|FBtr0310310 17820773|17820762 17822326|17822326 GTACTTAG 8mer-m1 dme-miR-252-5p X - 17821282 17821408 3'utr Socs16D FlyBase G51559.1 GCAACGCCCGTGCCCAAAGGTCCTTGAAAGCGAGCGAATTATGATATAACCATTAACGCATTGTACTTAGTTTAATCCATGTCATGTACACAAATGATCGATTGCCAGATGGAAAGAATGGCGAACA 33 17821347 0.975830784 10 33 208 1 1.73239376 0.092592593 0.454545455 0.666666667 33 0 0 54 X:17821282-17821408 8 17.5 4088 FBgn0030869 790.3733333 19.79 30.42 0.022141435 0.884284992 0.575279421 1 1 1 0.15 dme-miR-1008-3p 8mer-A1 AGCTGTGA X 17821556 17821563 - X_17821556_17821563_- 0.63955994 0.638671809 0.639115874 0.000627982 Socs16D FBtr0310310|FBtr0074473 17820762|17820773 17822326|17822326 X - 17821513 17821582 3'utr Socs16D FlyBase G68545.1 ACTTTTATGCTTGCCTTTTAGCTGTGATTTAAATAAGTCGTCGAATGTTAATTGGAAGACGATGTGCAGT 61 17821565 0.992139498 12 56 632 0.931506849 1.531478917 0.178082192 0.163934426 0.301369863 61 4 1 68 X:17821513-17821582 8 Socs16D FBtr0074473|FBtr0310310 17820773|17820762 17822326|17822326 AGCTGTGA 8mer-A1 dme-miR-1008-3p X - 17821535 17821576 3'utr Socs16D FlyBase G51560.1 ATGCTTGCCTTTTAGCTGTGATTTAAATAAGTCGTCGAATGT 52 17821554 0.62935682 11 48 531 0.933333333 1.62324929 0.244444444 0.538461538 0.733333333 52 5 1 84 X:17821535-17821576 8 54 4089 FBgn0030869 790.3733333 19.79 30.42 0.068322143 2.728650834 1.775147929 2 -9 -3.5 0.15 "dme-miR-995-3p,dme-miR-998-3p" 7mer-A1 GGTGCTA X 17821924 17821930 - X_17821924_17821930_- 0.8233471 0.823349515 0.823348308 1.70E-06 Socs16D FBtr0310310|FBtr0074473 17820762|17820773 17822326|17822326 X - 17821913 17821940 3'utr Socs16D FlyBase G68548.1 TTTTGTACTCGGTGCTATACTATAAATA 9 17821934 0.71350446 5 8 80 0.888888889 0.903089987 0 0 0 9 1 0 8 X:17821913-17821940 7 Socs16D FBtr0074473|FBtr0310310 17820773|17820762 17822326|17822326 GGTGCTA 7mer-A1 "dme-miR-995-3p,dme-miR-998-3p" X - 17821911 17821940 3'utr Socs16D FlyBase G51561.1 TTTTGTACTCGGTGCTATACTATAAATATT 9 17821936 0.627289222 6 8 83 0.857142857 1.079181246 0.071428571 0.444444444 0.642857143 9 2 0 12 X:17821911-17821940 7 9 4090 FBgn0030869 790.3733333 19.79 30.42 0.011387024 0.454775139 0.295857988 4 6 5 0.15 dme-bantam-3p 6mer2-7 GATCTC X 17851829 17851834 + X_17851829_17851834_+ 0.836693534 0.834043525 0.83536853 0.001873833 CG6506 FBtr0074465 17851740 17851889 X + 17851809 17851856 3'utr CG6506 FlyBase G62553.1 ACTTTTTATAGAACGACTAAGATCTCTAGGCTCAAGTTAAGTTAAGCT 86 17851835 0.761354949 5 85 401 0.990566038 2.021189299 0.132075472 0.197674419 0.349056604 86 1 0 105 X:17851809-17851856 6 CG6506 FBtr0074465 17851740 17851889 GATCTC 6mer2-7 dme-bantam-3p X + 17851787 17851844 3'utr CG6506 FlyBase G47198.1 CTCTAGCAATCAAATGTTTCACACTTTTTATAGAACGACTAAGATCTCTAGGCTCAAG 43 17851835 0.956567528 3 42 199 0.983870968 1.785329835 0.096774194 0.348837209 0.548387097 43 1 0 61 X:17851787-17851844 6 63 4091 FBgn0030874 43.33333333 3.953333333 5.973333333 1.453846154 15.93591906 10.546875 -6 -6 -6 0.15 dme-miR-305-5p 7mer-m1 GTACAAT X 17858578 17858584 - X_17858578_17858584_- 0.765586661 0.765586663 0.765586662 0 Arp8 FBtr0074544 17858377 17858769 X - 17858540 17858602 3'utr Arp8 FlyBase G68565.1 ACAAATTTATACAAGATTGTACAATTATTTTATTTTTAAAGACACCTAACAAATATGCAGAAT 7 17858579 0.99459099 6 6 63 0.777777778 0.84509804 0.111111111 0.285714286 0.444444444 7 2 0 7 X:17858540-17858602 7 Arp8 FBtr0074544 17858377 17858769 GTACAAT 7mer-m1 dme-miR-305-5p X - 17858573 17858643 3'utr Arp8 FlyBase G51575.1 AGCATTACCCTGGAGGAAGGAAACACTCCGGATGGGGTCATACAAATTTATACAAGATTGTACAATTATTT 11 17858584 0.87856763 7 11 55 1 1.146128036 0 0.181818182 0.357142857 11 0 0 14 X:17858573-17858643 7 4.5 4092 FBgn0030877 203.0033333 10.82333333 16.55 0.022167124 0.415768402 0.271903323 -5 0 -2.5 0.15 dme-miR-79-3p 7mer-A1 AGCTTTA X 17906060 17906066 - X_17906060_17906066_- 0.764781849 0.823349562 0.794065705 0.041413689 CG7772 FBtr0074540 17906029 17906174 X - 17906051 17906133 3'utr CG7772 FlyBase G68594.1 AGTCTACTCCCATTCTACTCCACGGTGATAGTTCTTAGATACTAAGAGTTTACATGAACTGTAGCAAAGCTTTAGCCCCAAAT 12 17906074 0.87536539 8 10 77 0.916666667 1.041392685 0.333333333 0 0 12 1 0 11 X:17906051-17906133 7 CG7772 FBtr0074540 17906029 17906174 AGCTTTA 7mer-A1 dme-miR-79-3p X - 17906053 17906118 3'utr CG7772 FlyBase G51592.1 TACTCCACGGTGATAGTTCTTAGATACTAAGAGTTTACATGAACTGTAGCAAAGCTTTAGCCCCAA 11 17906075 0.920476507 7 9 63 0.8 1.204119983 0.15 0.363636364 0.65 11 4 0 16 X:17906053-17906118 7 3.5 4093 FBgn0030883 188.33 28.34666667 43.33666667 0.0185844 0.123471308 0.080763018 8 9 8.5 0.15 dme-bantam-3p 7mer-A1 GATCTCA X 17924507 17924513 - X_17924507_17924513_- 0.823294808 0.823270935 0.823282871 1.69E-05 Sh FBtr0089658 17924305 17930123 X - 17924496 17924534 3'utr Sh FlyBase G68596.1 AAATTGAAACCAACCAAATTGGATCTCAAATCAAAGCAG 54 17924515 0.777553198 3 50 223 0.9375 1.477121255 0.046875 0.148148148 0.28125 54 3 1 60 X:17924496-17924534 7 Sh FBtr0089658 17924305 17930123 GATCTCA 7mer-A1 dme-bantam-3p X - 17924495 17924530 3'utr Sh FlyBase G51593.1 TGAAACCAACCAAATTGGATCTCAAATCAAAGCAGC 34 17924515 0.934119463 2 31 135 0.921568627 1.371067862 0.039215686 0.411764706 0.607843137 34 3 1 47 X:17924495-17924530 7 44 4094 FBgn0003380 28.61666667 0.493333333 0.783333333 1.537565521 89.18918919 56.17021277 2 2 2 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC X 18078953 18078959 - X_18078953_18078959_- 0.661613679 0.661615567 0.661614623 1.34E-06 CG7536 FBtr0343317|FBtr0343318|FBtr0074530 18078489|18078861|18078861 18079653|18079653|18079653 X - 18078916 18079015 3'utr CG7536 FlyBase G68597.1 AACTAGAGCTGATCCCGAACGGAATTGTACATAGTATACGTATGCTAGTGCCTGTGTGTGTTCTTTTCGCTCTGCGTGTGTGTGTGTGTGTGTGAGTGTG 28 18078952 0.991302797 8 26 277 0.96969697 1.505149978 0.212121212 0.142857143 0.272727273 28 1 0 32 X:18078916-18079015 7 CG7536 FBtr0074530|FBtr0343317|FBtr0343318 18078861|18078489|18078861 18079653|18079653|18079653 TGTGTTC 7mer-m8 dme-miR-317-3p X - 18078916 18079031 5'utr-coding CG7536 FlyBase G51596.1 AAGTTTAAAGAACTTAAACTAGAGCTGATCCCGAACGGAATTGTACATAGTATACGTATGCTAGTGCCTGTGTGTGTTCTTTTCGCTCTGCGTGTGTGTGTGTGTGTGTGAGTGTG 20 18078952 0.984385208 14 20 176 1 1.431363764 0.185185185 0.25 0.444444444 20 0 0 27 X:18078916-18079031 7 16 4095 FBgn0030890 573.73 20 30.81333333 0.027887682 0.8 0.519255733 -7 -7 -7 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 18079078 18079083 - X_18079078_18079083_- 0.830383576 0.781598998 0.805991287 0.034495921 CG7536 FBtr0343317|FBtr0343317|FBtr0343317|FBtr0343318|FBtr0343318|FBtr0343318|FBtr0074531|FBtr0074531|FBtr0074531|FBtr0074530|FBtr0074530|FBtr0074530 18078489|18078489|18078489|18078861|18078861|18078861|18079015|18079015|18079015|18078861|18078861|18078861 18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653 X - 18079056 18079115 5'utr CG7536 FlyBase G68598.1 CTGTCCACCTGTTGATTGATATACGACATAGACTGTGACCAAATCGAAACTTAAACTAAA 147 18079086 0.781455878 12 122 714 0.971428571 1.929418926 0.297142857 0.143835616 0.285714286 146 4 1 170 X:18079056-18079115 6 CG7536 FBtr0074531|FBtr0074531|FBtr0074531|FBtr0074530|FBtr0074530|FBtr0074530|FBtr0343317|FBtr0343317|FBtr0343317|FBtr0343318|FBtr0343318|FBtr0343318 18079015|18079015|18079015|18078861|18078861|18078861|18078489|18078489|18078489|18078861|18078861|18078861 18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X - 18079060 18079140 5'utr CG7536 FlyBase G51597.1 TAGATCTGCCTTATCTGTTATCTGTCTGTCCACCTGTTGATTGATATACGACATAGACTGTGACCAAATCGAAACTTAAAC 101 18079081 0.750316737 14 97 571 0.99378882 1.903089987 0.298136646 0.356435644 0.596273292 101 0 1 160 X:18079060-18079140 6 101 4096 FBgn0030890 573.73 20 30.81333333 0.176040995 5.05 3.277801817 3 -2 0.5 0.15 dme-miR-252-5p 8mer-m1 GTACTTAG X 18079247 18079254 - X_18079247_18079254_- 0.63678784 0.635015561 0.6359017 0.001253135 CG7536 FBtr0343317|FBtr0343318|FBtr0074531|FBtr0074530 18078489|18078861|18079015|18078861 18079653|18079653|18079653|18079653 X - 18079236 18079299 5'utr CG7536 FlyBase G68600.1 AATCCATACCTTCCACAGAAATTGGAGTAGAGAACGGCAGTATTAGTACTTAGAAAAGGCGAAC 10 18079252 0.967788521 5 10 52 1 1.041392685 0.181818182 0.1 0.181818182 10 0 0 11 X:18079236-18079299 8 CG7536 FBtr0074531|FBtr0074530|FBtr0343317|FBtr0343318 18079015|18078861|18078489|18078861 18079653|18079653|18079653|18079653 GTACTTAG 8mer-m1 dme-miR-252-5p X - 18079245 18079300 5'utr CG7536 FlyBase G51598.1 TAATCCATACCTTCCACAGAAATTGGAGTAGAGAACGGCAGTATTAGTACTTAGAA 6 18079257 0.952381365 3 6 25 1 1 0 0.5 0.7 6 0 0 10 X:18079245-18079300 8 5.5 4097 FBgn0030890 573.73 20 30.81333333 0.009586391 0.275 0.178494158 -2 3 0.5 0.15 dme-miR-999-3p 6mer2-7 GTTAAC X 18079416 18079421 - X_18079416_18079421_- 0.751423415 0.868607331 0.810015373 0.08286153 CG7536 FBtr0343317|FBtr0343318|FBtr0074531|FBtr0074530 18078489|18078861|18079015|18078861 18079653|18079653|18079653|18079653 X - 18079409 18079447 5'utr CG7536 FlyBase G68602.1 AACTAATTTAGCATTCCACGTATGCGGTTAACTAACGAA 8 18079425 0.961995296 3 8 46 1 0.903089987 0 0 0 8 0 0 8 X:18079409-18079447 6 CG7536 FBtr0074531|FBtr0074530|FBtr0343317|FBtr0343318 18079015|18078861|18078489|18078861 18079653|18079653|18079653|18079653 GTTAAC 6mer2-7 dme-miR-999-3p X - 18079413 18079443 5'utr CG7536 FlyBase G51600.1 AATTTAGCATTCCACGTATGCGGTTAACTAA 5 18079425 0.792519449 2 5 37 1 0.903089987 0 0.6 0.75 5 0 0 8 X:18079413-18079443 6 6.5 4098 FBgn0030890 573.73 20 30.81333333 0.011329371 0.325 0.210947642 4 4 4 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA X 18079495 18079502 - X_18079495_18079502_- 0.494879581 0.48791783 0.491398706 0.004922736 CG7536 FBtr0343317|FBtr0343318|FBtr0074531|FBtr0074530 18078489|18078861|18079015|18078861 18079653|18079653|18079653|18079653 X - 18079452 18079532 5'utr CG7536 FlyBase G68603.1 GTTTAGCTAATTTGTATATTTAGTGACTAAGTACTTAAAATTGAGGAGAGACAATGTCCAGCAATAATTAGTGCATAAGAT 38 18079477 0.659099148 12 34 199 0.905660377 1.380211242 0.20754717 0.315789474 0.509433962 38 4 1 48 X:18079452-18079532 8 CG7536 FBtr0074531|FBtr0074530|FBtr0343317|FBtr0343318 18079015|18078861|18078489|18078861 18079653|18079653|18079653|18079653 GTACTTAA 8mer-A1 dme-miR-252-5p X - 18079458 18079518 5'utr CG7536 FlyBase G51601.1 TATATTTAGTGACTAAGTACTTAAAATTGAGGAGAGACAATGTCCAGCAATAATTAGTGCA 26 18079491 0.685501035 8 25 126 0.911764706 1.491361694 0.117647059 0.230769231 0.411764706 26 3 0 31 X:18079458-18079518 8 17.5 4099 FBgn0030890 573.73 20 30.81333333 0.030502153 0.875 0.567935958 -25 -11 -18 0.15 dme-miR-1006-3p 6mer3-8 CGAATT X 18079630 18079635 - X_18079630_18079635_- 0.372154297 0.368417627 0.370285962 0.002642246 CG7536 FBtr0343317|FBtr0343318|FBtr0074531|FBtr0074530 18078489|18078861|18079015|18078861 18079653|18079653|18079653|18079653 X - 18079595 18079659 stop_codon CG7536 FlyBase G68604.1 TTGTAGGCAACGATGGCCGCCCACCGAATTGTGCTTCCTAATCAACGGTTTTGCGGAACGTCTTA 99 18079630 0.763937369 8 96 657 0.972972973 1.73239376 0.45045045 0.121212121 0.216216216 99 2 1 108 X:18079595-18079659 6 CG7536 FBtr0074531|FBtr0074530|FBtr0343317|FBtr0343318 18079015|18078861|18078489|18078861 18079653|18079653|18079653|18079653 CGAATT 6mer3-8 dme-miR-1006-3p X - 18079598 18079656 stop_codon CG7536 FlyBase G51602.1 TAGGCAACGATGGCCGCCCACCGAATTGTGCTTCCTAATCAACGGTTTTGCGGAACGTC 59 18079630 0.767527838 4 57 371 0.976470588 1.919078092 0.223529412 0.288135593 0.505882353 59 2 0 83 X:18079598-18079656 6 75.5 4100 FBgn0030890 573.73 20 30.81333333 0.131595001 3.775 2.450237992 -5 -5 -5 0.15 dme-miR-14-3p 6mer2-7 AGACTG X 18087720 18087725 + X_18087720_18087725_+ 0.897507744 0.999976426 0.948742085 0.072456313 dik FBtr0339540|FBtr0074510 18087677|18087581 18088418|18088418 X + 18087655 18087746 stop_codon dik FlyBase G62593.1 AGCCTCAAGCTGCAGTGCGTCTGAAGGAGCTGCTCCTCCTTACTCGCCACTCCTTTCATTTCGCCAGACTGTAAATTAGCCACGCTATTCGA 20 18087729 0.978189958 10 18 121 0.913043478 1.322219295 0.130434783 0.15 0.260869565 20 2 0 21 X:18087655-18087746 6 dik FBtr0339540|FBtr0074510 18087677|18087581 18088418|18088418 AGACTG 6mer2-7 dme-miR-14-3p X + 18087648 18087790 stop_codon dik FlyBase G47221.1 CGACGCTAGCCTCAAGCTGCAGTGCGTCTGAAGGAGCTGCTCCTCCTTACTCGCCACTCCTTTCATTTCGCCAGACTGTAAATTAGCCACGCTATTCGACACGTACACGTAGCCTCTAGTGTCCGCAATCCAAGTTGTGGACG 13 18087728 0.978801547 12 13 83 1 1.361727836 0.217391304 0.615384615 0.782608696 13 0 0 23 X:18087648-18087790 6 9 4101 FBgn0030891 215.6666667 9.88 15.20666667 0.041731066 0.910931174 0.591845682 -9 -8 -8.5 0.15 dme-miR-14-3p 6mer2-7 AGACTG X 18087933 18087938 + X_18087933_18087938_+ 0.999515413 0.966616592 0.983066002 0.023262965 dik FBtr0339540|FBtr0074510 18087677|18087581 18088418|18088418 X + 18087844 18087985 3'utr dik FlyBase G62595.1 GAGTTTTGGCATTCGTTTTCCCCAAATCGAACGCCACTTTTGAGTCGTTTTCGACTAGCTTCCAAACCCGTATTCTTATCTTCGTCACCAGACTGTACATTAACAAAGATACATTAGCTCATAGAATGTAGTGTTCAAGATT 47 18087939 0.979101437 19 45 303 0.961538462 1.397940009 0.096153846 0.106382979 0.192307692 47 1 1 50 X:18087844-18087985 6 dik FBtr0339540|FBtr0074510 18087677|18087581 18088418|18088418 AGACTG 6mer2-7 dme-miR-14-3p X + 18087894 18087978 3'utr dik FlyBase G47223.1 TCGACTAGCTTCCAAACCCGTATTCTTATCTTCGTCACCAGACTGTACATTAACAAAGATACATTAGCTCATAGAATGTAGTGTT 41 18087938 0.777740845 14 39 268 0.967741935 1.477121255 0.129032258 0.390243902 0.596774194 41 1 1 60 X:18087894-18087978 6 29.5 4102 FBgn0030891 215.6666667 9.88 15.20666667 0.136785162 2.98582996 1.939938623 -6 -5 -5.5 0.15 dme-miR-980-5p 8mer-m1 GAAAAACT X 18088253 18088260 + X_18088253_18088260_+ 0.528607959 0.59425213 0.561430044 0.046417388 dik FBtr0339540|FBtr0074510 18087677|18087581 18088418|18088418 X + 18088215 18088275 3'utr dik FlyBase G62596.1 AGTGGAGGGTGAGATTCGCATTATTCGCTAAATGAACTGAAAAACTTTCCGCTACTGGAAT 11 18088247 0.989182469 2 8 83 0.75 0.954242509 0.583333333 0.090909091 0.166666667 11 3 0 9 X:18088215-18088275 8 dik FBtr0339540|FBtr0074510 18087677|18087581 18088418|18088418 GAAAAACT 8mer-m1 dme-miR-980-5p X + 18088232 18088277 3'utr dik FlyBase G47224.1 GCATTATTCGCTAAATGAACTGAAAAACTTTCCGCTACTGGAATTT 9 18088245 0.852040673 3 9 67 1 1.146128036 0.642857143 0.333333333 0.571428571 9 0 0 14 X:18088232-18088277 8 9 4103 FBgn0030891 215.6666667 9.88 15.20666667 0.041731066 0.910931174 0.591845682 6 8 7 0.15 dme-miR-34-5p 7mer-A1 ACTGCCA X 18088759 18088765 - X_18088759_18088765_- 0.821078221 0.820108194 0.820593208 0.000685894 CG7206 FBtr0089576|FBtr0308352 18088723|18088723 18089007|18089869 X - 18088733 18088826 3'utr CG7206 FlyBase G68622.1 GGCCACTGACGACGTGTTCACCCAAGACTAAAAACTTGCACATATTAGAAGATCAGATTTGACTGCCATTTGCTACGTATAATAAAGTTTGTTT 73 18088768 0.98128655 14 69 502 0.93902439 1.886490725 0.195121951 0.109589041 0.207317073 73 5 0 77 X:18088733-18088826 7 CG7206 FBtr0089576|FBtr0308352 18088723|18088723 18089007|18089869 ACTGCCA 7mer-A1 dme-miR-34-5p X - 18088749 18088826 3'utr CG7206 FlyBase G51613.1 GGCCACTGACGACGTGTTCACCCAAGACTAAAAACTTGCACATATTAGAAGATCAGATTTGACTGCCATTTGCTACGT 55 18088768 0.978579715 12 52 368 0.946808511 1.171238756 0.287234043 0.454545455 0.680851064 55 0 5 89 X:18088749-18088826 7 53 4104 FBgn0030892 243 18.00333333 27.36 0.218106996 2.943899278 1.937134503 3 3 3 0.15 dme-miR-2a-2-5p 7mer-m1 GATGAGG X 18089607 18089613 - X_18089607_18089613_- 0.446233114 0.447394869 0.446813992 0.000821517 CG7206 FBtr0308352 18088723 18089869 X - 18089499 18089634 5'utr CG7206 FlyBase G68627.1 GAGGCGCCACAGAAAGGTCAGGATGAGGCTAAGGAAGAGGACGACACTATATTGATGCTGCAGGCGGCCGATGCCGAGGAGCTGCCCCCAAGGCTTGAGGATTACATGTACTTTGTGCTGGACACCAACGTCCTCA 125 18089611 0.894010264 11 121 311 0.97826087 2.130333768 0.260869565 0.096 0.18115942 125 3 0 135 X:18089499-18089634 7 CG7206 FBtr0308352 18088723 18089869 GATGAGG 7mer-m1 dme-miR-2a-2-5p X - 18089564 18089635 5'utr CG7206 FlyBase G51619.1 GGAGGCGCCACAGAAAGGTCAGGATGAGGCTAAGGAAGAGGACGACACTATATTGATGCTGCAGGCGGCCGA 56 18089611 0.87827535 4 54 120 0.967391304 1.949390007 0.315217391 0.428571429 0.652173913 56 3 0 89 X:18089564-18089635 7 79 4105 FBgn0030892 243 18.00333333 27.36 0.325102881 4.388076282 2.887426901 -2 -2 -2 0.15 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG X 18097086 18097092 + X_18097086_18097092_+ 0.698007077 0.697255828 0.697631453 0.000531249 RhoGAP16F FBtr0074513|FBtr0307200|FBtr0307201|FBtr0343310 18096876|18096876|18096876|18096876 18097413|18097413|18097413|18097413 X + 18097057 18097112 3'utr RhoGAP16F FlyBase G62618.1 ATCCTCAACCCGAAACCGAACACCCCACTGTACCTGCCACACCTCTATACCCATTC 172 18097085 0.975605003 3 171 493 0.995024876 2.301029996 0 0.139534884 0.263681592 172 1 0 200 X:18097057-18097112 7 RhoGAP16F FBtr0307201|FBtr0074513|FBtr0343310|FBtr0307200 18096876|18096876|18096876|18096876 18097413|18097413|18097413|18097413 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" X + 18097060 18097109 3'utr RhoGAP16F FlyBase G47244.1 CTCAACCCGAAACCGAACACCCCACTGTACCTGCCACACCTCTATACCCA 84 18097085 0.972804142 2 82 245 0.968992248 1.795880017 0.007751938 0.357142857 0.581395349 84 3 1 125 X:18097060-18097109 7 127.5 4106 FBgn0030893 601.22 27.60666667 42.25333333 0.212068793 4.61844965 3.017513411 1 1 1 0.15 dme-miR-14-3p 6mer2-7 AGACTG X 18097710 18097715 - X_18097710_18097715_- 0.985965259 0.996896466 0.991430862 0.007729526 CG7192 FBtr0074528|FBtr0074527|FBtr0310272 18097556|18097556|18097556 18098391|18098391|18098391 X - 18097631 18097750 3'utr CG7192 FlyBase G68632.1 CATATATCTATTACATATTAGCTCTAGTGACGATTAGACTGTATTGCAAAATCATAGATTCTTCCCAGCTGCCTCCGTCCCCGTCATCCGCATTCCCAGCTCCTTTTCGCCCCTCTTCCT 1121 18097717 0.987311583 18 1096 9676 0.979607251 2.635818721 0.069486405 0.149866191 0.28021148 1121 25 2 1297 X:18097631-18097750 6 CG7192 FBtr0074527|FBtr0310272|FBtr0074528 18097556|18097556|18097556 18098391|18098391|18098391 AGACTG 6mer2-7 dme-miR-14-3p X - 18097655 18097744 3'utr CG7192 FlyBase G51623.1 TCTATTACATATTAGCTCTAGTGACGATTAGACTGTATTGCAAAATCATAGATTCTTCCCAGCTGCCTCCGTCCCCGTCATCCGCATTCC 715 18097717 0.811940449 17 690 5858 0.970588235 1.909720566 0.061580882 0.384615385 0.595588235 715 20 12 1056 X:18097655-18097744 6 890 4107 FBgn0030894 672.5866667 40.63666667 62.49666667 1.323249544 21.90140267 14.24075951 2 2 2 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 18098008 18098013 - X_18098008_18098013_- 0.980586084 0.986394595 0.983490339 0.00410723 CG7192 FBtr0074528|FBtr0074528|FBtr0074528|FBtr0074527|FBtr0074527|FBtr0074527|FBtr0310272|FBtr0310272|FBtr0310272 18097556|18097556|18097556|18097556|18097556|18097556|18097556|18097556|18097556 18098391|18098391|18098391|18098391|18098391|18098391|18098391|18098391|18098391 X - 18097979 18098049 3'utr CG7192 FlyBase G68635.1 ATATACATACATGCATCGATTAACCCCAAATCAAATTGTGATCAAAGGAGCGAGCGCAATGTTTTGTCATT 380 18098014 0.742963396 7 367 1673 0.967517401 1.620136055 0.062645012 0.121052632 0.225058005 380 5 9 417 X:18097979-18098049 6 CG7192 FBtr0074527|FBtr0074527|FBtr0074527|FBtr0310272|FBtr0310272|FBtr0310272|FBtr0074528|FBtr0074528|FBtr0074528 18097556|18097556|18097556|18097556|18097556|18097556|18097556|18097556|18097556 18098391|18098391|18098391|18098391|18098391|18098391|18098391|18098391|18098391 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 18097977 18098042 3'utr CG7192 FlyBase G51625.1 TACATGCATCGATTAACCCCAAATCAAATTGTGATCAAAGGAGCGAGCGCAATGTTTTGTCATTAA 210 18098014 0.954500981 6 200 915 0.959876543 1.53851788 0.067901235 0.419047619 0.62345679 210 5 8 311 X:18097977-18098042 6 291.5 4108 FBgn0030894 672.5866667 40.63666667 62.49666667 0.433401396 7.173324584 4.66424876 1 1 1 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT X 18098258 18098264 - X_18098258_18098264_- 0.649674291 0.645256645 0.647465468 0.003123786 CG7192 FBtr0074528|FBtr0074527|FBtr0310272 18097556|18097556|18097556 18098391|18098391|18098391 X - 18098234 18098287 3'utr CG7192 FlyBase G68636.2 TAATCGCAAATAGATGCGCGTGTGGCAGCTGCCATGGTTAACCCAGTAGTTATT 171 18098265 0.841304419 9 167 783 0.99009901 2.301029996 0.287128713 0.152046784 0.282178218 171 2 0 200 X:18098234-18098287 7 CG7192 FBtr0074527|FBtr0310272|FBtr0074528 18097556|18097556|18097556 18098391|18098391|18098391 GGCAGCT 7mer-m8 dme-miR-980-3p X - 18098139 18098286 3'utr CG7192 FlyBase G51626.1 AATCGCAAATAGATGCGCGTGTGGCAGCTGCCATGGTTAACCCAGTAGTTATTCAGTTGGTATTAAGTTCTGAGGACCCCGGCCCCTTAGAGTAAAATGTGTGTAATATTCCTGTGCCTTCGATATGTATCTAATTTGGATGCTCGCC 134 18098265 0.841770574 21 131 638 0.984293194 2.274157849 0.308900524 0.305970149 0.513089005 134 3 0 188 X:18098139-18098286 7 139 4109 FBgn0030894 672.5866667 40.63666667 62.49666667 0.206664816 3.420556148 2.22411862 1 1 1 0.15 dme-miR-308-3p 8mer-m1 CTGTGATT X 18240797 18240804 - X_18240797_18240804_- 0.385419888 0.385560622 0.385490255 9.95E-05 upd2 FBtr0300182 18240652 18241347 X - 18240784 18240818 3'utr upd2 FlyBase G68658.1 AATGCTTAAATCTACTGTGATTTATTTTAAGTACT 24 18240797 0.713651948 3 23 254 0.965517241 1.447158031 0.310344828 0.166666667 0.310344828 24 1 0 28 X:18240784-18240818 8 upd2 FBtr0300182 18240652 18241347 CTGTGATT 8mer-m1 dme-miR-308-3p X - 18240786 18240816 3'utr upd2 FlyBase G51649.1 TGCTTAAATCTACTGTGATTTATTTTAAGTA 9 18240797 0.655473911 3 9 99 1 1 0.3 0.111111111 0.2 9 0 0 10 X:18240786-18240816 8 16.5 4110 FBgn0030904 6 0.38 0.586666667 2.75 43.42105263 28.125 -7 -7 -7 0.15 dme-miR-8-3p 8mer-A1 CAGTATTA X 18241279 18241286 - X_18241279_18241286_- 0.671696488 0.671624096 0.671660292 5.12E-05 upd2 FBtr0300182 18240652 18241347 X - 18241267 18241311 3'utr upd2 FlyBase G68661.1 CAGCCGGGTCAACATCACGCCCTTCCAGTATTATAGCGAGTACTT 13 18241288 0.774020328 4 11 83 0.866666667 0.812913357 0 0.153846154 0.266666667 13 1 1 13 X:18241267-18241311 8 upd2 FBtr0300182 18240652 18241347 CAGTATTA 8mer-A1 dme-miR-8-3p X - 18241273 18241301 3'utr upd2 FlyBase G51651.1 AACATCACGCCCTTCCAGTATTATAGCGA 6 18241288 0.838403907 2 5 32 0.888888889 0.903089987 0 0.333333333 0.555555556 6 1 0 8 X:18241273-18241301 8 9.5 4111 FBgn0030904 6 0.38 0.586666667 1.583333333 25 16.19318182 2 2 2 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA X 18284395 18284402 + X_18284395_18284402_+ 0.636648986 0.629461798 0.633055392 0.005082118 upd3 FBtr0113465|FBtr0113465|FBtr0113465 18283950|18283950|18283950 18284596|18284596|18284596 X + 18284359 18284417 3'utr upd3 FlyBase G62630.1 AAGTATACTAGATATACTTTGCCTTGTATTACGATGCTGTGATAGTAGATGATTAAAGT 34 18284393 0.766648922 8 27 289 0.8 1.028028724 0.55 0.176470588 0.3 34 6 2 32 X:18284359-18284417 8 upd3 FBtr0113465|FBtr0113465|FBtr0113465 18283950|18283950|18283950 18284596|18284596|18284596 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X + 18284368 18284419 3'utr upd3 FlyBase G47255.1 AGATATACTTTGCCTTGTATTACGATGCTGTGATAGTAGATGATTAAAGTAA 30 18284393 0.839112212 7 29 274 0.978723404 1.662757832 0.340425532 0.366666667 0.595744681 30 1 0 46 X:18284368-18284419 8 30 4112 FBgn0053542 45.60666667 2.493333333 3.816666667 0.657798567 12.03208556 7.860262009 2 2 2 0.15 dme-miR-184-5p 6mer2-7 GATAAG X 18495234 18495239 - X_18495234_18495239_- 0.956874088 0.990898862 0.973886475 0.024059167 GalNAc-T2 FBtr0346082|FBtr0074625 18495065|18495182 18496408|18496408 X - 18495206 18495260 3'utr GalNAc-T2 FlyBase G68710.1 ATGTGTAACTTTAGAGTTATCGATAAGTCTGAATAATAGCATAGAAATAAAAACG 259 18495237 0.854606592 9 241 2091 0.912587413 2.416640507 0.311188811 0.084942085 0.171328671 259 25 0 261 X:18495206-18495260 6 GalNAc-T2 FBtr0074625|FBtr0346082 18495182|18495065 18496408|18496408 GATAAG 6mer2-7 dme-miR-184-5p X - 18495208 18495358 3'utr GalNAc-T2 FlyBase G51686.1 TGATTTTCGTAAAGCTCTCTGTACCAGGTAGTCGTAATCGTAATTGATCGTTGCAAGTGCTTCGGGAGTTTGATTTTTGAAAACAATATTTTACATTCATGTGTAACTTTAGAGTTATCGATAAGTCTGAATAATAGCATAGAAATAAAAA 153 18495237 0.989177313 15 127 1215 0.825471698 1.640978057 0.311320755 0.294117647 0.490566038 153 34 3 175 X:18495208-18495358 6 190 4113 FBgn0030930 489.5666667 17.31333333 26.39333333 0.388098318 10.974201 7.198787573 -2 -2 -2 0.15 dme-miR-283-5p 8mer-m1 TGATATTT X 18495772 18495779 - X_18495772_18495779_- 0.555493506 0.547113836 0.551303671 0.005925343 GalNAc-T2 FBtr0346082|FBtr0074625 18495065|18495182 18496408|18496408 X - 18495674 18495854 3'utr GalNAc-T2 FlyBase G68714.1 GAAAATCATCACAATTAGCTGATAGTGAACCCATTCCCATTTCGATCGGCGAATCTCATACAATAGATATTCAATTGATATTTGGGAGGATCCAAGCCTGGGGGATTTCCGTGCCGACCTCGTGTGTGTGTGTCCTTGCGTATGAGTGAGAGAATGCGATGGGTATAGAGCGGAAGCGAAT 23 18495781 0.986558614 15 20 163 0.888888889 1.079181246 0.111111111 0.173913043 0.296296296 23 2 1 24 X:18495674-18495854 8 GalNAc-T2 FBtr0074625|FBtr0346082 18495182|18495065 18496408|18496408 TGATATTT 8mer-m1 dme-miR-283-5p X - 18495727 18495811 3'utr GalNAc-T2 FlyBase G51688.1 GATCGGCGAATCTCATACAATAGATATTCAATTGATATTTGGGAGGATCCAAGCCTGGGGGATTTCCGTGCCGACCTCGTGTGTG 12 18495780 0.985284187 6 12 74 1 1.380211242 0.25 0.583333333 0.791666667 12 0 0 24 X:18495727-18495811 8 5.5 4114 FBgn0030930 489.5666667 17.31333333 26.39333333 0.011234425 0.31767424 0.208385956 2 1 1.5 0.15 dme-miR-1012-3p 7mer-A1 TGACTAA X 18501798 18501804 - X_18501798_18501804_- 0.823009034 0.820012267 0.821510651 0.002118987 Wnt5 FBtr0343046|FBtr0074623 18501399|18501554 18501837|18501837 X - 18501770 18501812 3'utr Wnt5 FlyBase G68723.1 AATGTTTGTGACTAAGCCATGAAGGAAATAATCGTATTTAAAC 6 18501809 0.982473773 4 6 32 1 0.954242509 0 0.5 0.666666667 6 0 0 9 X:18501770-18501812 7 Wnt5 FBtr0343046|FBtr0074623 18501399|18501554 18501837|18501837 TGACTAA 7mer-A1 dme-miR-1012-3p X - 18501782 18501839 stop_codon Wnt5 FlyBase G51694.1 AGAGCGTTGATTGAATTCGAATGTCTTAATGTTTGTGACTAAGCCATGAAGGAAATAA 8 18501793 0.933876318 5 7 36 1 1.230448921 0.588235294 0.875 0.941176471 8 0 0 17 X:18501782-18501839 7 5.5 4115 FBgn0010194 534.6666667 16.08666667 24.67666667 0.010286783 0.341898052 0.222882615 5 -11 -3 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 18520394 18520399 + X_18520394_18520399_+ 0.988806163 0.988302944 0.988554554 0.000355887 Aats-his FBtr0333806|FBtr0333804|FBtr0074593|FBtr0333805 18520197|18520197|18520197|18520197 18520445|18520445|18520445|18520445 X + 18520300 18520408 3'utr Aats-his FlyBase G62663.1 ACGTTTTGTATTCTTGGTGTCCTGGCCGGAGGCGCCGCGTGCTACTATGCTTAGGTCTACAGTGTAACCATAGGAATAAGTGCGGACAACTTATACCAAAATGAACACT 72 18520393 0.876923305 17 69 393 0.9625 1.58546073 0.275 0.097222222 0.1875 72 2 1 77 X:18520300-18520408 6 Aats-his FBtr0333805|FBtr0074593|FBtr0333804|FBtr0333806 18520197|18520197|18520197|18520197 18520445|18520445|18520445|18520445 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 18520300 18520405 3'utr Aats-his FlyBase G47277.2 ACGTTTTGTATTCTTGGTGTCCTGGCCGGAGGCGCCGCGTGCTACTATGCTTAGGTCTACAGTGTAACCATAGGAATAAGTGCGGACAACTTATACCAAAATGAAC 56 18520393 0.907422703 15 52 310 0.92 1.361727836 0.12 0.232142857 0.426666667 56 4 2 69 X:18520300-18520405 6 25.5 4116 FBgn0027087 817.9566667 44.05 67.41 0.031175246 0.578887628 0.378282154 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 1852482 1852487 + X_1852482_1852487_+ 0.96397895 0.999663761 0.981821355 0.025233035 CG42666 FBtr0332901|FBtr0332901|FBtr0332901|FBtr0302657|FBtr0302657|FBtr0302657|FBtr0302656|FBtr0302656|FBtr0302656|FBtr0302655|FBtr0302655|FBtr0302655|FBtr0309968|FBtr0309968|FBtr0309968|FBtr0309967|FBtr0309967|FBtr0309967|FBtr0309969|FBtr0309969|FBtr0309969|FBtr0302654|FBtr0302654|FBtr0302654|FBtr0302658|FBtr0302658|FBtr0302658|FBtr0309966|FBtr0309966|FBtr0309966|FBtr0302659|FBtr0302659|FBtr0302659 1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459 1853667|1853667|1853667|1852866|1852866|1852866|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1853667|1853667|1853667 X + 1852426 1852619 stop_codon CG42666 FlyBase G58062.1 GTGAGCTGGATCCCGCTTGGAGCTGGGACGATTAGAGGACTCGTTCGGGTGCGAATCTGTGACATTTGGGGTGGGGTGGGGCATTGGGGGATGGGCAGCAAGTACTTTTAGTTGTTAAGCCAGCTCGTAATAGTACTGTATTCAAAAAGAAAAACACAATCGTAAAATCTCAGCTGGGTATCTCTCCTGGCAAT 133 1852481 0.813179732 34 113 825 0.871794872 1.531478917 0.384615385 0.165413534 0.288461538 133 17 3 136 X:1852426-1852619 6 CG42666 FBtr0309967|FBtr0309967|FBtr0309967|FBtr0309969|FBtr0309969|FBtr0309969|FBtr0302655|FBtr0302655|FBtr0302655|FBtr0309968|FBtr0309968|FBtr0309968|FBtr0302657|FBtr0302657|FBtr0302657|FBtr0332901|FBtr0332901|FBtr0332901|FBtr0302659|FBtr0302659|FBtr0302659|FBtr0309966|FBtr0309966|FBtr0309966|FBtr0302656|FBtr0302656|FBtr0302656|FBtr0302658|FBtr0302658|FBtr0302658|FBtr0302654|FBtr0302654|FBtr0302654 1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459 1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852866|1852866|1852866|1853667|1853667|1853667|1853667|1853667|1853667|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X + 1852428 1852619 stop_codon CG42666 FlyBase G43925.1 GAGCTGGATCCCGCTTGGAGCTGGGACGATTAGAGGACTCGTTCGGGTGCGAATCTGTGACATTTGGGGTGGGGTGGGGCATTGGGGGATGGGCAGCAAGTACTTTTAGTTGTTAAGCCAGCTCGTAATAGTACTGTATTCAAAAAGAAAAACACAATCGTAAAATCTCAGCTGGGTATCTCTCCTGGCAAT 89 1852481 0.981583078 24 77 555 0.888888889 1.630088715 0.243055556 0.449438202 0.659722222 89 14 2 128 X:1852428-1852619 6 41 4117 FBgn0261548 1054.043333 36.35 55.79666667 0.038897832 1.127922971 0.734810921 1 1 1 0.15 dme-miR-12-5p 6mer2-7 ATACTC X 1853220 1853225 + X_1853220_1853225_+ 0.962097044 0.986814764 0.974455904 0.017478124 CG42666 FBtr0332901|FBtr0302659 1852459|1852459 1853667|1853667 X + 1853196 1853234 3'utr CG42666 FlyBase G58065.1 TTTTTTTAACGAATAAAGCATCTCATACTCGTATACAAA 17 1853221 0.747268691 3 17 91 1 1.322219295 0 0.235294118 0.380952381 17 0 0 21 X:1853196-1853234 6 CG42666 FBtr0332901|FBtr0302659 1852459|1852459 1853667|1853667 ATACTC 6mer2-7 dme-miR-12-5p X + 1853196 1853230 3'utr CG42666 FlyBase G43929.1 TTTTTTTAACGAATAAAGCATCTCATACTCGTATA 9 1853221 0.741003281 2 9 53 1 1.146128036 0.071428571 0.444444444 0.642857143 9 0 0 14 X:1853196-1853230 6 13 4118 FBgn0261548 1054.043333 36.35 55.79666667 0.012333459 0.357634113 0.232988828 -1 -1 -1 0.15 dme-miR-276a-3p 7mer-A1 GTTCCTA X 1853525 1853531 + X_1853525_1853531_+ 0.800423401 0.806235575 0.803329488 0.004109846 CG42666 FBtr0332901|FBtr0302659 1852459|1852459 1853667|1853667 X + 1853499 1853551 3'utr CG42666 FlyBase G58068.1 GAGGAGCACTTTAATTGAAAATCGATGTTCCTAGCAGAATAAGTTTCAGCACA 53 1853524 0.949692328 2 52 278 0.985074627 1.819543936 0.447761194 0.188679245 0.358208955 53 1 0 66 X:1853499-1853551 7 CG42666 FBtr0332901|FBtr0302659 1852459|1852459 1853667|1853667 GTTCCTA 7mer-A1 dme-miR-276a-3p X + 1853511 1853550 3'utr CG42666 FlyBase G43930.1 AATTGAAAATCGATGTTCCTAGCAGAATAAGTTTCAGCAC 38 1853524 0.726038478 4 37 199 0.983333333 1.469822016 0.4 0.421052632 0.633333333 38 0 1 59 X:1853511-1853550 7 45 4119 FBgn0261548 1054.043333 36.35 55.79666667 0.042692742 1.237964237 0.806499791 1 1 1 0.15 dme-miR-13b-2-5p 6mer3-8 TTTGAC X 18571344 18571349 + X_18571344_18571349_+ 0.536596463 0.560851821 0.548724142 0.017151087 Bx FBtr0340365|FBtr0340364|FBtr0340366|FBtr0340363|FBtr0340367 18570935|18570935|18570935|18570935|18571268 18571726|18571726|18572809|18571726|18571726 X + 18571197 18571367 stop_codon Bx FlyBase G62666.1 AGGAGGAGGAGGCGTTGGCAGCATCGGAAGCGGCTGCAAGCGCTACCAAAGAAAGTTTTACAACCGCAACTGAGGAAATCGACGGGCGAGAAAACGCTAGCGGAAAGGATGCAGAAATCCAGAATCGATATTCAAATCTTCGTTTGCTTTGACTGAGTTCAAGTTTTATAG 39 18571345 0.986008934 17 35 277 0.880952381 1.568201724 0.119047619 0.076923077 0.142857143 39 5 0 37 X:18571197-18571367 6 Bx FBtr0340366|FBtr0340363|FBtr0340365|FBtr0340364|FBtr0340367 18570935|18570935|18570935|18570935|18571268 18572809|18571726|18571726|18571726|18571726 TTTGAC 6mer3-8 dme-miR-13b-2-5p X + 18571328 18571376 3'utr Bx FlyBase G47281.1 TCAAATCTTCGTTTGCTTTGACTGAGTTCAAGTTTTATAGTTTTAAAGG 15 18571346 0.968178929 4 12 169 0.863636364 0.801632346 0.090909091 0.333333333 0.545454545 15 1 2 19 X:18571328-18571376 6 18 4120 FBgn0265598 121.1466667 5.323333333 8.24 0.148580233 3.381340013 2.184466019 -1 -2 -1.5 0.15 dme-miR-13b-2-5p 6mer2-7 TTGACG X 18571554 18571559 + X_18571554_18571559_+ 0.973064508 0.961679139 0.967371823 0.008050694 Bx FBtr0340365|FBtr0340364|FBtr0340366|FBtr0340363|FBtr0340367 18570935|18570935|18570935|18570935|18571268 18571726|18571726|18572809|18571726|18571726 X + 18571519 18571574 3'utr Bx FlyBase G62668.1 CCACTACATACTGTACATATTTTCCTTGTAAACTGTTGACGTATTAGCGGGATCCT 12 18571555 0.984178398 4 12 98 1 1.079181246 0.083333333 0 0 12 0 0 12 X:18571519-18571574 6 Bx FBtr0340366|FBtr0340363|FBtr0340365|FBtr0340364|FBtr0340367 18570935|18570935|18570935|18570935|18571268 18572809|18571726|18571726|18571726|18571726 TTGACG 6mer2-7 dme-miR-13b-2-5p X + 18571541 18571575 3'utr Bx FlyBase G47282.1 TCCTTGTAAACTGTTGACGTATTAGCGGGATCCTT 5 18571555 0.974366194 2 5 43 1 0.903089987 0.625 0.6 0.75 5 0 0 8 X:18571541-18571575 6 7.5 4121 FBgn0265598 121.1466667 5.323333333 8.24 0.061908431 1.408891672 0.910194175 -1 -1 -1 0.15 dme-miR-282-5p 7mer-A1 GAGGCTA X 18572070 18572076 + X_18572070_18572076_+ 0.812655939 0.5473941 0.68002502 0.187568418 Bx FBtr0340366 18570935 18572809 X + 18572047 18572097 3'utr Bx FlyBase G62669.1 ATTATTTAAGTTTAGTTTAGTGCGAGGCTAAAGAATGTTCTTTCCACGGCG 16 18572075 0.968843636 4 16 176 1 1.255272505 0.222222222 0.125 0.222222222 16 0 0 18 X:18572047-18572097 7 Bx FBtr0340366 18570935 18572809 GAGGCTA 7mer-A1 dme-miR-282-5p X + 18572015 18572079 3'utr Bx FlyBase G47284.1 ATTTTAAGTCTGTTGGAGCAACGTTGTTGATTATTATTTAAGTTTAGTTTAGTGCGAGGCTAAAG 8 18572062 0.799982577 6 7 57 1 1.113943352 0.615384615 0.375 0.615384615 8 0 0 13 X:18572015-18572079 7 10 4122 FBgn0265598 121.1466667 5.323333333 8.24 0.082544574 1.878522229 1.213592233 -5 8 1.5 0.15 dme-bantam-3p 7mer-A1 GATCTCA X 1862231 1862237 - X_1862231_1862237_- 0.821383377 0.822154638 0.821769007 0.000545321 CG14814 FBtr0070369|FBtr0070370|FBtr0339494 1862133|1862133|1862007 1862327|1862327|1862327 X - 1862212 1862272 3'utr CG14814 FlyBase G64071.1 TGGTATATCATAGACAATTTGAAAAACTTAACTGAGATCTCAGTTCGTGCGAAGTAGTAGA 12 1862240 0.973021708 4 12 80 1 1.146128036 0.142857143 0.166666667 0.285714286 12 0 0 14 X:1862212-1862272 7 CG14814 FBtr0339494|FBtr0070370|FBtr0070369 1862007|1862133|1862133 1862327|1862327|1862327 GATCTCA 7mer-A1 dme-bantam-3p X - 1862222 1862253 3'utr CG14814 FlyBase G48303.1 TGAAAAACTTAACTGAGATCTCAGTTCGTGCG 5 1862240 0.706221503 2 5 32 1 0.77815125 0 0.2 0.333333333 5 0 0 6 X:1862222-1862253 7 7 4123 FBgn0023515 470.3333333 16.16 24.75 0.014883062 0.433168317 0.282828283 3 3 3 0.15 dme-miR-999-3p 7mer-A1 GTTAACA X 18624336 18624342 - X_18624336_18624342_- 0.823049682 0.822819484 0.822934583 0.000162776 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 X - 18624265 18624364 3'utr wgn FlyBase G68734.1 AACGCATATAGACGCACGTATTGTTAACATCACCCATATCCCATATCCTAGTACTAGTATCCAGAGTAAACAGTATCCTATAATCCCACCAACAACACAC 18 18624341 0.978538704 9 16 103 0.894736842 1.230448921 0 0.055555556 0.105263158 18 2 0 17 X:18624265-18624364 7 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 GTTAACA 7mer-A1 dme-miR-999-3p X - 18624314 18624363 3'utr wgn FlyBase G51702.1 ACGCATATAGACGCACGTATTGTTAACATCACCCATATCCCATATCCTAG 15 18624342 0.985775645 5 13 102 0.882352941 0.875061263 0 0.133333333 0.235294118 15 1 1 15 X:18624314-18624363 7 12 4124 FBgn0030941 765.4933333 38.51666667 59.04666667 0.015676165 0.31155344 0.203229084 -1 0 -0.5 0.15 dme-miR-190-5p 8mer-A1 ACATATCA X 18624381 18624388 - X_18624381_18624388_- 0.61159579 0.612812332 0.612204061 0.000860195 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 X - 18624365 18624426 3'utr wgn FlyBase G68735.1 ATCGTTGCGGAGTGGAACGAAACCAAGTAATATTGGCAACATATCAGCTTCTATATGCATGG 14 18624394 0.987569503 8 10 114 0.705882353 1.079181246 0.058823529 0.214285714 0.352941176 14 5 0 12 X:18624365-18624426 8 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 ACATATCA 8mer-A1 dme-miR-190-5p X - 18624366 18624407 3'utr wgn FlyBase G51703.1 AAACCAAGTAATATTGGCAACATATCAGCTTCTATATGCATG 7 18624398 0.851995796 6 7 52 1 1.079181246 0 0.428571429 0.666666667 7 0 0 12 X:18624366-18624407 8 9.5 4125 FBgn0030941 765.4933333 38.51666667 59.04666667 0.012410297 0.246646473 0.160889692 6 10 8 0.15 dme-miR-2a-2-5p 7mer-m1 GATGAGG X 18624546 18624552 - X_18624546_18624552_- 0.81673386 0.812990178 0.814862019 0.002647196 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 X - 18624454 18624599 3'utr wgn FlyBase G68736.1 TGGGAATCCCGAGCGATGCGGCAAAATGTTTTGTACATACTCGTAGAGATGAGGCATGTGGCACCGCCCACGTATACCCACGTATATGATAGAAGCGATTTAGATTAACAAATCTCTACTTAATGTAAATATTAAGGCGATCGAAC 153 18624550 0.912189723 20 146 744 0.952095808 1.599337133 0.191616766 0.091503268 0.167664671 153 5 3 159 X:18624454-18624599 7 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 GATGAGG 7mer-m1 dme-miR-2a-2-5p X - 18624474 18624652 3'utr wgn FlyBase G51704.1 TGTTGACTTGTTTGTAATGCGCGGACAGTTGAGGACGCGGGCTTCCCGTTGTGTGGGAATCCCGAGCGATGCGGCAAAATGTTTTGTACATACTCGTAGAGATGAGGCATGTGGCACCGCCCACGTATACCCACGTATATGATAGAAGCGATTTAGATTAACAAATCTCTACTTAATGT 124 18624550 0.924158568 21 121 586 0.983783784 2.260071388 0.308108108 0.379032258 0.583783784 124 3 0 182 X:18624474-18624652 7 101 4126 FBgn0030941 765.4933333 38.51666667 59.04666667 0.131941058 2.622241454 1.71051146 -2 -2 -2 0.15 dme-miR-305-5p 7mer-A1 GTACAAA X 18624777 18624783 - X_18624777_18624783_- 0.782596808 0.782632744 0.782614776 2.54E-05 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 X - 18624707 18624833 3'utr wgn FlyBase G68738.1 ACGATACGCAAACGGAACCGGAAACGTAAATGGATTAGAGAAAGAACTTTGTACAAACAGCCGCTTAAAAGTAGGAGGAGGACGGAGGAAGGAAACCGAAACTATTATTATTTTTTATATTATTAAT 192 18624785 0.949667208 10 183 734 0.956896552 2.045322979 0.211206897 0.171875 0.314655172 192 9 1 222 X:18624707-18624833 7 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 GTACAAA 7mer-A1 dme-miR-305-5p X - 18624727 18624862 3'utr wgn FlyBase G51705.1 GCGGGACGAAGCGAGAATGGATCCGGAACACGATACGCAAACGGAACCGGAAACGTAAATGGATTAGAGAAAGAACTTTGTACAAACAGCCGCTTAAAAGTAGGAGGAGGACGGAGGAAGGAAACCGAAACTATTA 161 18624785 0.931806281 12 153 561 0.94893617 2.047274867 0.293617021 0.354037267 0.557446809 161 11 1 223 X:18624727-18624862 7 152.5 4127 FBgn0030941 765.4933333 38.51666667 59.04666667 0.199217934 3.959324968 2.582702947 2 2 2 0.15 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA X 18635679 18635684 - X_18635679_18635684_- 0.999980976 0.981245652 0.990613314 0.013247858 Rip11 FBtr0343020|FBtr0343020|FBtr0343021|FBtr0343021|FBtr0301545|FBtr0301545|FBtr0343019|FBtr0343019|FBtr0074616|FBtr0074616 18635640|18635640|18635640|18635640|18635640|18635640|18635640|18635640|18635640|18635640 18636833|18636833|18636312|18636312|18636312|18636312|18636833|18636833|18637354|18637354 X - 18635667 18635717 3'utr Rip11 FlyBase G68744.1 CACAGTTGAAATATGTTGATACTACAATGATTTTACTTATTGATATAAACG 20 18635689 0.745427231 11 17 180 0.863636364 1.278753601 0.318181818 0.1 0.181818182 20 3 0 19 X:18635667-18635717 6 Rip11 FBtr0074616|FBtr0074616|FBtr0343019|FBtr0343019|FBtr0301545|FBtr0301545|FBtr0343021|FBtr0343021|FBtr0343020|FBtr0343020 18635640|18635640|18635640|18635640|18635640|18635640|18635640|18635640|18635640|18635640 18637354|18637354|18636833|18636833|18636312|18636312|18636312|18636312|18636833|18636833 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" X - 18635660 18635720 3'utr Rip11 FlyBase G51709.1 ACACACAGTTGAAATATGTTGATACTACAATGATTTTACTTATTGATATAAACGCAAGCAA 12 18635690 0.978335919 7 12 99 1 1.278753601 0 0.5 0.684210526 12 0 0 19 X:18635660-18635720 6 8.5 4128 FBgn0027335 6668.076667 280.47 431.2966667 0.00127473 0.030306272 0.019708012 5 6 5.5 0.15 dme-miR-317-3p 6mer3-8 TGTGTT X 18635907 18635912 - X_18635907_18635912_- 0.63009928 0.975365099 0.80273219 0.244139788 Rip11 FBtr0343020|FBtr0343021|FBtr0301545|FBtr0343019|FBtr0074616 18635640|18635640|18635640|18635640|18635640 18636833|18636312|18636312|18636833|18637354 X - 18635896 18635968 3'utr Rip11 FlyBase G68746.1 AAGCGATTTGTCGTGTTGCGAGTCCTTGTCAATTGATTGAAATTATCCGAAAGTATTGTGTTTGTTTTTTTGT 15 18635913 0.829821829 9 15 139 1 1.255272505 0.111111111 0.2 0.333333333 15 0 0 18 X:18635896-18635968 6 Rip11 FBtr0074616|FBtr0343019|FBtr0301545|FBtr0343021|FBtr0343020 18635640|18635640|18635640|18635640|18635640 18637354|18636833|18636312|18636312|18636833 TGTGTT 6mer3-8 dme-miR-317-3p X - 18635902 18635961 3'utr Rip11 FlyBase G51711.1 TTGTCGTGTTGCGAGTCCTTGTCAATTGATTGAAATTATCCGAAAGTATTGTGTTTGTTT 14 18635926 0.984816777 7 14 115 1 1.342422681 0.227272727 0.428571429 0.636363636 14 0 0 22 X:18635902-18635961 6 8 4129 FBgn0027335 6668.076667 280.47 431.2966667 0.001199746 0.02852355 0.018548717 1 14 7.5 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA X 18636806 18636813 - X_18636806_18636813_- 0.623046902 0.624330506 0.623688704 0.000907642 Rip11 FBtr0343020|FBtr0343019|FBtr0074616 18635640|18635640|18635640 18636833|18636833|18637354 X - 18636755 18636833 5'utr Rip11 FlyBase G68750.1 GTGCTGCGCATGTTGCAAATTGCATTTAAGTAGACACTTAACCAACAAATCCCAACAACAACAACATCACCACCACCAA 47 18636814 0.983310187 5 45 344 0.981818182 1.73239376 0.309090909 0.170212766 0.290909091 47 1 0 54 X:18636755-18636833 8 Rip11 FBtr0074616|FBtr0343019|FBtr0343020 18635640|18635640|18635640 18637354|18636833|18636833 TGCATTTA 8mer-A1 dme-miR-277-3p X - 18636784 18636835 stop_codon Rip11 FlyBase G51716.1 AAGTGCTGCGCATGTTGCAAATTGCATTTAAGTAGACACTTAACCAACAAAT 27 18636814 0.844795357 4 25 202 0.973684211 1.568201724 0.421052632 0.37037037 0.552631579 27 1 0 37 X:18636784-18636835 8 35.5 4130 FBgn0027335 6668.076667 280.47 431.2966667 0.005323874 0.126573252 0.082309934 1 1 1 0.15 dme-miR-2a-2-5p 7mer-A1 GATGAGA X 18653527 18653533 - X_18653527_18653533_- 0.781458573 0.741230059 0.761344316 0.028445845 CG6659 FBtr0074613|FBtr0074612 18653390|18653390 18653985|18653985 X - 18653513 18653594 3'utr CG6659 FlyBase G68778.1 AAATACTTTCGTTAAGTTTAAGCTAAGCTTTTTACATTTACGCATGTAGTATACATATGACGATGAGACGCGTGTGGCAACG 12 18653531 0.974475456 5 11 72 1 1.113943352 0 0.083333333 0.153846154 12 0 0 13 X:18653513-18653594 7 CG6659 FBtr0074613|FBtr0074612 18653390|18653390 18653985|18653985 GATGAGA 7mer-A1 dme-miR-2a-2-5p X - 18653496 18653556 3'utr CG6659 FlyBase G51739.1 TACGCATGTAGTATACATATGACGATGAGACGCGTGTGGCAACGAAAGTGGCTGCATGTGG 17 18653531 0.974934976 3 16 70 1 1.414973348 0.038461538 0.411764706 0.615384615 17 0 0 26 X:18653496-18653556 7 11 4131 FBgn0030946 482.2966667 17.24333333 26.43666667 0.022807539 0.637927702 0.416088766 -2 -2 -2 0.15 dme-miR-283-5p 6mer3-8 TGATAT X 18653779 18653784 - X_18653779_18653784_- 0.999999999 0.999999896 0.999999947 7.07E-08 CG6659 FBtr0074613|FBtr0074612 18653390|18653390 18653985|18653985 X - 18653741 18653818 3'utr CG6659 FlyBase G68779.1 AATCCCAAATCCCGATCCCGCGTAGTAGCTGATTTGATATGGCAGATTGGCGATTAGAAGGAGGCCCCTTCCGCTAGA 10 18653772 0.958460538 6 10 49 1 1.041392685 0.363636364 0.1 0.181818182 10 0 0 11 X:18653741-18653818 6 CG6659 FBtr0074613|FBtr0074612 18653390|18653390 18653985|18653985 TGATAT 6mer3-8 dme-miR-283-5p X - 18653743 18653844 3'utr CG6659 FlyBase G51741.1 CGGATGCCCGAACACATCTCGCACCCAATCCCAAATCCCGATCCCGCGTAGTAGCTGATTTGATATGGCAGATTGGCGATTAGAAGGAGGCCCCTTCCGCTA 8 18653779 0.974690541 7 8 41 1 1.204119983 0.125 0.625 0.8125 8 0 0 16 X:18653743-18653844 6 4 4132 FBgn0030946 482.2966667 17.24333333 26.43666667 0.008293651 0.23197371 0.151305006 -12 -5 -8.5 0.15 dme-miR-1008-3p 7mer-m8 AGCTGTG X 18653909 18653915 - X_18653909_18653915_- 0.615601163 0.63493578 0.625268472 0.013671627 CG6659 FBtr0074613|FBtr0074612 18653390|18653390 18653985|18653985 X - 18653831 18653992 stop_codon CG6659 FlyBase G68780.1 CATATAGGGCTGGCCGTCCACGGAGGCGGCGCGATGATGGAATGCTGGAATCGTGTTGTGTTGTACGTAGCTGTGTGAGCTGTGTGACTAGGATTTAGCATTTTACGATGTGTGTGTATTATGATTACGTTTAGTATTGCCCCAACCTCGGATGCCCGAACA 45 18653917 0.882371976 19 41 353 0.92 1.662757832 0.22 0.111111111 0.2 45 4 0 46 X:18653831-18653992 7 CG6659 FBtr0074613|FBtr0074612 18653390|18653390 18653985|18653985 AGCTGTG 7mer-m8 dme-miR-1008-3p X - 18653857 18654001 stop_codon CG6659 FlyBase G51742.1 CGAGATGTCCATATAGGGCTGGCCGTCCACGGAGGCGGCGCGATGATGGAATGCTGGAATCGTGTTGTGTTGTACGTAGCTGTGTGAGCTGTGTGACTAGGATTTAGCATTTTACGATGTGTGTGTATTATGATTACGTTTAGTA 43 18653917 0.982407413 15 40 306 0.954545455 1.799340549 0.303030303 0.348837209 0.575757576 43 3 0 63 X:18653857-18654001 7 26 4133 FBgn0030946 482.2966667 17.24333333 26.43666667 0.053908728 1.507829113 0.983482537 2 2 2 0.15 dme-miR-92b-3p 6mer3-8 GTGCAA X 18661019 18661024 + X_18661019_18661024_+ 0.995850222 1 0.997925111 0.002934352 fu FBtr0074602 18660455 18661204 X + 18661004 18661049 3'utr fu FlyBase G62688.1 ATTCAAGTGTGGTTTGTGCAAAATAGATTGATAGCATTATAGTTTG 10 18661017 0.72867858 3 8 86 0.909090909 1 0.181818182 0.1 0.181818182 10 1 0 10 X:18661004-18661049 6 fu FBtr0074602 18660455 18661204 GTGCAA 6mer3-8 dme-miR-92b-3p X + 18661002 18661058 3'utr fu FlyBase G47299.1 ATATTCAAGTGTGGTTTGTGCAAAATAGATTGATAGCATTATAGTTTGTATATCGAA 12 18661016 0.84731103 6 11 110 0.947368421 1.255272505 0.421052632 0.333333333 0.578947368 12 1 0 18 X:18661002-18661058 6 8.5 4134 FBgn0001079 159.36 5.946666667 9.103333333 0.053338353 1.429372197 0.933723911 2 3 2.5 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 18781249 18781254 + X_18781249_18781254_+ 0.999999496 0.99999992 0.999999708 2.83E-07 CG6891 FBtr0074631|FBtr0334453|FBtr0074632 18781193|18781193|18781193 18781345|18781345|18781345 X + 18781229 18781320 3'utr CG6891 FlyBase G62699.1 TTTGCAACTCTTAACTGCTTACCAAACTGCTCCTTTCTCTTTAATTATTATGAATTAATTTTATGAAATTTAAAAACTGTACATTTTATGAA 47 18781263 0.788561177 13 40 418 0.859649123 1.088136089 0.087719298 0.14893617 0.298245614 47 5 3 49 X:18781229-18781320 6 CG6891 FBtr0334453|FBtr0074632|FBtr0074631 18781193|18781193|18781193 18781345|18781345|18781345 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 18781239 18781283 3'utr CG6891 FlyBase G47310.1 TTAACTGCTTACCAAACTGCTCCTTTCTCTTTAATTATTATGAAT 33 18781257 0.721924709 8 32 306 0.977272727 1.33243846 0.022727273 0.272727273 0.454545455 33 0 1 43 X:18781239-18781283 6 34.5 4135 FBgn0030955 851.42 106.5933333 161.8266667 0.040520542 0.323660016 0.213191069 -14 -8 -11 0.15 dme-miR-263a-5p 6mer2-7 TGCCAT X 18786305 18786310 - X_18786305_18786310_- 0.762384394 0.697389697 0.729887046 0.045958193 CG6961 FBtr0074660 18786140 18786460 X - 18786273 18786331 3'utr CG6961 FlyBase G68801.1 TAGACTAGTTTAAGTGAATTCTGCCATGTCTGTCCACTTTAGAATTTTGTGTTTAGTGA 9 18786305 0.983133943 5 7 80 0.888888889 0.903089987 0.333333333 0 0 9 1 0 8 X:18786273-18786331 6 CG6961 FBtr0074660 18786140 18786460 TGCCAT 6mer2-7 dme-miR-263a-5p X - 18786266 18786322 3'utr CG6961 FlyBase G51752.1 TTAAGTGAATTCTGCCATGTCTGTCCACTTTAGAATTTTGTGTTTAGTGAGTAAAAT 6 18786303 0.979914662 5 6 47 1 1 0 0.666666667 0.8 6 0 0 10 X:18786266-18786322 6 5 4136 FBgn0030959 210.0433333 13.48333333 20.56333333 0.023804612 0.370828183 0.24315124 -5 -7 -6 0.15 dme-miR-986-5p 7mer-m8 ATTCGAG X 18786361 18786367 - X_18786361_18786367_- 0.619410069 0.440444738 0.529927403 0.126547648 CG6961 FBtr0074660 18786140 18786460 X - 18786333 18786376 3'utr CG6961 FlyBase G68801.2 GCTTATAAAATTCGAGTCGATCCATCCAGCGTATGTTTAGCAAA 10 18786366 0.767929484 5 10 55 1 1.041392685 0.727272727 0.1 0.181818182 10 0 0 11 X:18786333-18786376 7 CG6961 FBtr0074660 18786140 18786460 ATTCGAG 7mer-m8 dme-miR-986-5p X - 18786340 18786390 3'utr CG6961 FlyBase G51753.1 CATTTTCATTTCGCGCTTATAAAATTCGAGTCGATCCATCCAGCGTATGTT 8 18786376 0.758290143 4 7 69 0.888888889 0.602059991 0.111111111 0.125 0.222222222 8 0 1 8 X:18786340-18786390 7 8.5 4137 FBgn0030959 210.0433333 13.48333333 20.56333333 0.04046784 0.630407911 0.413357108 -1 9 4 0.15 dme-miR-252-5p 6mer3-8 GTACTT X 18793314 18793319 + X_18793314_18793319_+ 0.715462068 0.693202932 0.7043325 0.015739631 Atg101 FBtr0074635 18792553 18793517 X + 18793253 18793405 3'utr Atg101 FlyBase G62716.1 TGTTTAGATCGAGGCAAGTAGCGGTGAGGCGGTAGAAATGTATGTATAAAAGATTGTGATTGTACTTGTAGTGATTAAACTATAGTACGGACTCCATGTATCCATGGATATCCAATATGTAGACATGTATGTATGTAAATCAATGTTTATCTA 428 18793313 0.99077693 22 402 4174 0.941176471 1.490426721 0.348884381 0.140186916 0.253549696 428 15 14 464 X:18793253-18793405 6 Atg101 FBtr0074635 18792553 18793517 GTACTT 6mer3-8 dme-miR-252-5p X + 18793255 18793389 3'utr Atg101 FlyBase G47323.1 TTTAGATCGAGGCAAGTAGCGGTGAGGCGGTAGAAATGTATGTATAAAAGATTGTGATTGTACTTGTAGTGATTAAACTATAGTACGGACTCCATGTATCCATGGATATCCAATATGTAGACATGTATGTATGTA 347 18793313 0.990353791 18 328 3332 0.940740741 1.927712462 0.368518519 0.409221902 0.62037037 347 27 5 508 X:18793255-18793389 6 372.5 4138 FBgn0030960 179.3333333 11.9 18.35333333 2.077137546 31.30252101 20.29604068 1 1 1 0.15 dme-miR-252-5p 6mer3-8 GTACTT X 18793437 18793442 + X_18793437_18793442_+ 0.995731081 0.988241786 0.991986434 0.005295735 Atg101 FBtr0074635 18792553 18793517 X + 18793428 18793468 3'utr Atg101 FlyBase G62717.1 ACGATAAATGTACTTTACGACTTAACTAATATTGTAAAATC 17 18793442 0.736639763 6 16 125 1 1.255272505 0.055555556 0.058823529 0.111111111 17 0 0 18 X:18793428-18793468 6 Atg101 FBtr0074635 18792553 18793517 GTACTT 6mer3-8 dme-miR-252-5p X + 18793427 18793454 3'utr Atg101 FlyBase G47324.1 AACGATAAATGTACTTTACGACTTAACT 6 18793441 0.796787092 3 6 41 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 X:18793427-18793454 6 10.5 4139 FBgn0030960 179.3333333 11.9 18.35333333 0.058550186 0.882352941 0.57210316 -5 -4 -4.5 0.15 dme-miR-184-5p 8mer-m1 TGATAAGG X 1881446 1881453 - X_1881446_1881453_- 0.614708889 0.614169112 0.614439 0.000381696 trr FBtr0070362|FBtr0070363 1881311|1881311 1882155|1882155 X - 1881418 1881483 3'utr trr FlyBase G64099.1 TCGTGCGCAACCTTCTTTGAATATATACACTGATAAGGATATGAACACCTACTTCTATTTTATTTT 21 1881460 0.961421611 9 20 159 0.958333333 1.361727836 0.25 0.142857143 0.25 21 1 0 23 X:1881418-1881483 8 trr FBtr0070362|FBtr0070363 1881311|1881311 1882155|1882155 TGATAAGG 8mer-m1 dme-miR-184-5p X - 1881430 1881477 3'utr trr FlyBase G48319.1 GCAACCTTCTTTGAATATATACACTGATAAGGATATGAACACCTACTT 15 1881459 0.954735205 6 13 96 0.818181818 0.954242509 0.318181818 0.4 0.590909091 15 3 1 18 X:1881430-1881477 8 14 4140 FBgn0023518 907.1566667 13.24 20.31 0.015432836 1.057401813 0.689315608 7 6 6.5 0.15 dme-miR-92b-3p 6mer3-8 GTGCAA X 1881842 1881847 - X_1881842_1881847_- 0.576127858 0.693144353 0.634636106 0.082743161 trr FBtr0070362|FBtr0070363 1881311|1881311 1882155|1882155 X - 1881828 1881948 3'utr trr FlyBase G64103.1 TTATATGCTATATGCAGATATGCTCGTGGAGAGCATATGACCTTGTAAGTTTTGTATATGTGCCCACTGTAGCCAATTCGTATCCTTTATATCGCTCTTAAGTGCAAAAGTGGAGAGTGTC 23 1881850 0.871893938 9 22 179 0.903225806 1.447158031 0.129032258 0.217391304 0.419354839 23 3 0 28 X:1881828-1881948 6 trr FBtr0070362|FBtr0070363 1881311|1881311 1882155|1882155 GTGCAA 6mer3-8 dme-miR-92b-3p X - 1881831 1881932 3'utr trr FlyBase G48321.1 GATATGCTCGTGGAGAGCATATGACCTTGTAAGTTTTGTATATGTGCCCACTGTAGCCAATTCGTATCCTTTATATCGCTCTTAAGTGCAAAAGTGGAGAGT 8 1881850 0.976102413 5 8 60 1 1.176091259 0.266666667 0.5 0.733333333 8 0 0 15 X:1881831-1881932 6 5 4141 FBgn0023518 907.1566667 13.24 20.31 0.005511727 0.377643505 0.246184146 3 3 3 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA X 18831927 18831933 + X_18831927_18831933_+ 0.819008438 0.807312957 0.813160698 0.008269897 CG7101 FBtr0074639 18831799 18832123 X + 18831868 18831974 3'utr CG7101 FlyBase G62725.1 ATACTTAAGCAATGGATAAATGTAACGTTTTAATAGCGTTAATATTTTGAATTTATATCCTAGTCATCGGAAATGTTTTTCCAAACGAACTTGAATTTAAAATCGTA 150 18831925 0.884279782 16 145 1192 0.964071856 2.206825876 0.233532934 0.093333333 0.185628743 150 6 0 161 X:18831868-18831974 7 CG7101 FBtr0074639 18831799 18832123 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X + 18831752 18831972 stop_codon CG7101 FlyBase G47329.1 CTTCCGGGCCATCGATCTCGAACGGCATGTGTGTGAGGAACATCCGTAGGGCAGTCAACCTAGCCGGAATCGTAGATACCTGAGCGACATCTCACGTCCAGAACTACGATTAATATATACTTAAGCAATGGATAAATGTAACGTTTTAATAGCGTTAATATTTTGAATTTATATCCTAGTCATCGGAAATGTTTTTCCAAACGAACTTGAATTTAAAATCG 153 18831925 0.983825919 29 132 1005 0.884057971 1.359361103 0.289855072 0.296052632 0.483091787 152 17 7 183 X:18831752-18831972 7 113.5 4142 FBgn0030963 43.33333333 3.66 5.636666667 2.619230769 31.01092896 20.13601419 2 2 2 0.15 dme-miR-252-5p 7mer-m8 GTACTTA X 18832091 18832097 + X_18832091_18832097_+ 0.582722472 0.585603801 0.584163136 0.002037387 CG7101 FBtr0074639 18831799 18832123 X + 18831986 18832115 3'utr CG7101 FlyBase G62726.1 GCTGTAAAATTAATGCTTATGAGACGATTTACATTTACATCTTAGGAACTATAGACATAAGCGAATAGTTACTTTAATATAGCAAGCAGATGGCTGAAAGACAATGTACTTATATGAATAAAAAAATATC 186 18832090 0.881927067 14 179 1100 0.966346154 2.002166062 0.240384615 0.107526882 0.201923077 186 6 1 201 X:18831986-18832115 7 CG7101 FBtr0074639 18831799 18832123 GTACTTA 7mer-m8 dme-miR-252-5p X + 18832056 18832110 3'utr CG7101 FlyBase G47330.1 ACTTTAATATAGCAAGCAGATGGCTGAAAGACAATGTACTTATATGAATAAAAAA 120 18832090 0.867756336 8 116 656 0.975490196 2.298853076 0.205882353 0.408333333 0.651960784 120 5 0 199 X:18832056-18832110 7 120 4143 FBgn0030963 43.33333333 3.66 5.636666667 2.769230769 32.78688525 21.289178 1 1 1 0.15 dme-miR-307a-3p 7mer-m8 GGTTGTG X 18841222 18841228 + X_18841222_18841228_+ 0.48096408 0.696181379 0.58857273 0.152181612 Pvf1 FBtr0343604 18841137 18842901 X + 18841157 18841373 3'utr Pvf1 FlyBase G62736.1 CAGGGATCCACGGGCAGGGATTGGTTGCGATCCGGTCTGGTCTGATCTGGTCTGGTCTGGGGAACGGTTGTGCTCGTCCTTGGTTGGTTTGCGGTTGGTTCCTGGTGGTGGCTCCCTAGCTTAAGCTGTCCCAACAAGTTCCTCGCTTATTTATTATAGCCATTTCGTACAGTTGATAGTTTTCTGGCAAATAATAGAATTACTTAATAGAATTTAA 93 18841213 0.98972878 38 87 760 0.943396226 1.397940009 0.377358491 0.129032258 0.235849057 93 3 3 100 X:18841157-18841373 7 Pvf1 FBtr0343604 18841137 18842901 GGTTGTG 7mer-m8 dme-miR-307a-3p X + 18841184 18841273 3'utr Pvf1 FlyBase G47336.1 CGATCCGGTCTGGTCTGATCTGGTCTGGTCTGGGGAACGGTTGTGCTCGTCCTTGGTTGGTTTGCGGTTGGTTCCTGGTGGTGGCTCCCT 31 18841225 0.740815313 17 28 241 0.895833333 1.33243846 0.5625 0.419354839 0.625 31 4 1 43 X:18841184-18841273 7 20 4144 FBgn0030964 2.333333333 0.133333333 0.206666667 8.571428571 150 96.77419355 9 -3 3 0.15 dme-miR-8-3p 7mer-A1 AGTATTA X 18841758 18841764 + X_18841758_18841764_+ 0.823348024 0.817564254 0.820456139 0.004089693 Pvf1 FBtr0343604 18841137 18842901 X + 18841716 18841788 3'utr Pvf1 FlyBase G62738.1 ACTTCTGTTTCTTTTGTGTTTCGTTTTAGATTAAAAATGTCGAGTATTATTCTTAGAGTCCACAAAAAAAAAA 17 18841753 0.988638716 6 17 164 1 1.278753601 0.105263158 0.117647059 0.210526316 17 0 0 19 X:18841716-18841788 7 Pvf1 FBtr0343604 18841137 18842901 AGTATTA 7mer-A1 dme-miR-8-3p X + 18841708 18841765 3'utr Pvf1 FlyBase G47338.1 ATGTTTTTACTTCTGTTTCTTTTGTGTTTCGTTTTAGATTAAAAATGTCGAGTATTAT 5 18841753 0.986884832 3 5 54 1 0.77815125 0 0.2 0.333333333 5 0 0 6 X:18841708-18841765 7 9.5 4145 FBgn0030964 2.333333333 0.133333333 0.206666667 4.071428571 71.25 45.96774194 5 5 5 0.15 dme-miR-8-3p 7mer-A1 AGTATTA X 18861866 18861872 - X_18861866_18861872_- 0.814362171 0.821199897 0.817781034 0.004834984 CG7326 FBtr0074653|FBtr0333159 18861558|18861195 18862233|18862233 X - 18861838 18861878 3'utr CG7326 FlyBase G68814.1 GCAACAAGTATTAGCTGGATAAACGACTTCTATATATATGT 5 18861868 0.963782656 3 4 25 1 0.84509804 0.571428571 0.4 0.571428571 5 0 0 7 X:18861838-18861878 7 CG7326 FBtr0074653|FBtr0333159 18861558|18861195 18862233|18862233 AGTATTA 7mer-A1 dme-miR-8-3p X - 18861832 18861883 3'utr CG7326 FlyBase G51764.1 GTTTTGCAACAAGTATTAGCTGGATAAACGACTTCTATATATATGTATGTAC 8 18861878 0.890229103 6 8 58 1 1.113943352 0.230769231 0.5 0.692307692 8 0 0 13 X:18861832-18861883 7 4.5 4146 FBgn0030970 277.82 13.14 20.1 0.016197538 0.342465753 0.223880597 -4 6 1 0.15 dme-miR-14-3p 7mer-A1 AGACTGA X 18879407 18879413 + X_18879407_18879413_+ 0.822439533 0.822939492 0.822689513 0.000353553 CG34401 FBtr0112653|FBtr0333160 18878120|18878120 18880636|18884075 X + 18879390 18879431 3'utr CG34401 FlyBase G62782.1 GTGCGTGTGAGCATTTTAGACTGAGATATCTGCCAACAACAA 81 18879405 0.674951499 9 81 560 1 1.973127854 0.021276596 0.160493827 0.276595745 81 0 0 94 X:18879390-18879431 7 CG34401 FBtr0333160|FBtr0112653 18878120|18878120 18884075|18880636 AGACTGA 7mer-A1 dme-miR-14-3p X + 18879380 18879468 3'utr CG34401 FlyBase G47365.1 GTGTGTGTGTGTGCGTGTGAGCATTTTAGACTGAGATATCTGCCAACAACAACAAATACCGATGCCCACACACAGGCACACACCCACGC 39 18879405 0.977934613 11 37 251 0.965517241 1.447158031 0 0.384615385 0.586206897 39 1 1 56 X:18879380-18879468 7 57.5 4147 FBgn0085430 1429.756667 16.81 26.06 0.040216634 3.420582986 2.206446662 2 2 2 0.15 dme-miR-317-3p 8mer-A1 TGTGTTCA X 18879539 18879546 + X_18879539_18879546_+ 0.629151709 0.630427357 0.629789533 0.000902056 CG34401 FBtr0112653|FBtr0333160 18878120|18878120 18880636|18884075 X + 18879504 18879664 3'utr CG34401 FlyBase G62784.1 GGAAGTTGGAAAAGCTCTGTTTGATTTTTCAAAAATGTGTTCAGTTAAACTAACGTATTTATAGAGATGATCTATCAAATAGTTTTCTACACCGACAGCTATATGAAAAAGAACTCGGACTTTTACATATATGCTTACGATCCCTAGACCTAACTTTAAAT 53 18879539 0.874685887 18 47 447 0.887096774 1.263241435 0.048387097 0.150943396 0.274193548 53 5 2 55 X:18879504-18879664 8 CG34401 FBtr0333160|FBtr0112653 18878120|18878120 18884075|18880636 TGTGTTCA 8mer-A1 dme-miR-317-3p X + 18879506 18879579 3'utr CG34401 FlyBase G47366.1 AAGTTGGAAAAGCTCTGTTTGATTTTTCAAAAATGTGTTCAGTTAAACTAACGTATTTATAGAGATGATCTATC 25 18879539 0.830932442 9 22 227 0.923076923 1.556302501 0.025641026 0.4 0.615384615 25 3 0 36 X:18879506-18879579 8 21 4148 FBgn0085430 1429.756667 16.81 26.06 0.014687814 1.249256395 0.805832694 0 0 0 0.15 dme-bantam-3p 7mer-A1 GATCTCA X 18879923 18879929 + X_18879923_18879929_+ 0.811516503 0.815558576 0.81353754 0.002858196 CG34401 FBtr0112653|FBtr0333160 18878120|18878120 18880636|18884075 X + 18879912 18879938 3'utr CG34401 FlyBase G62786.1 AACTAGCAAACGATCTCAACTAAAGTA 20 18879915 0.872009704 2 18 61 0.925925926 1.397940009 0.222222222 0.2 0.407407407 20 2 0 25 X:18879912-18879938 7 CG34401 FBtr0333160|FBtr0112653 18878120|18878120 18884075|18880636 GATCTCA 7mer-A1 dme-bantam-3p X + 18879911 18879936 3'utr CG34401 FlyBase G47368.1 CAACTAGCAAACGATCTCAACTAAAG 9 18879915 0.815933272 2 8 26 0.928571429 1.113943352 0.071428571 0.555555556 0.714285714 9 1 0 13 X:18879911-18879936 7 14.5 4149 FBgn0085430 1429.756667 16.81 26.06 0.010141586 0.862581797 0.556408289 8 8 8 0.15 dme-miR-11-3p 8mer-m1 CTGTGATG X 18887517 18887524 + X_18887517_18887524_+ 0.462274222 0.462274221 0.462274221 0 CG7332 FBtr0342877|FBtr0074647 18887445|18887445 18888860|18887605 X + 18887481 18887547 3'utr CG7332 FlyBase G62800.1 AGGTGTGCCAGAATCGCATGGAACGGCATGGACATACTGTGATGGAGGAAACACTGATGTAAACAGA 46 18887515 0.957914001 7 40 190 0.884615385 1.361727836 0.403846154 0.130434783 0.230769231 46 5 1 46 X:18887481-18887547 8 CG7332 FBtr0342877|FBtr0074647 18887445|18887445 18888860|18887605 CTGTGATG 8mer-m1 dme-miR-11-3p X + 18887495 18887549 3'utr CG7332 FlyBase G47376.1 CGCATGGAACGGCATGGACATACTGTGATGGAGGAAACACTGATGTAAACAGAAG 34 18887511 0.765145744 5 29 136 0.890625 1.755874856 0.59375 0.558823529 0.765625 34 7 0 57 X:18887495-18887549 8 38 4150 FBgn0030973 1168.416667 41.72 64.31666667 0.032522645 0.910834132 0.590826639 2 6 4 0.15 dme-miR-1012-3p 6mer3-8 TTGACT X 1891898 1891903 - X_1891898_1891903_- 0.700019668 0.683652007 0.691835838 0.011573712 arm FBtr0089990 1891399 1892098 X - 1891787 1891924 stop_codon arm FlyBase G64126.1 TTGATGCCGGTGCATTGAACTTTGACTTGGACGCCATGCCGACGCCACCCAATGACAACAACAACCTGGCTGCCTGGTACGATACCGATTGTTAGACAAGCCGAGCTAAGGGTAAGGGTCGAGTATCCATTCGACCCC 54 1891903 0.879473949 15 51 278 0.936507937 1.293730757 0.19047619 0.166666667 0.285714286 54 2 2 59 X:1891787-1891924 6 arm FBtr0089990 1891399 1892098 TTGACT 6mer3-8 dme-miR-1012-3p X - 1891873 1891959 3'utr arm FlyBase G48336.2 TTCGCCCTATTCCATGGACATGGACGTTGGCGAGATTGATGCCGGTGCATTGAACTTTGACTTGGACGCCATGCCGACGCCACCCAA 27 1891903 0.970933498 7 23 156 0.916666667 1.217483944 0.166666667 0.307692308 0.5 26 2 1 33 X:1891873-1891959 6 23 4151 FBgn0000117 5213.67 200.9433333 306.79 0.00441148 0.11446013 0.074969849 0 0 0 0.15 dme-miR-263a-5p 6mer2-7 TGCCAT X 19025639 19025644 + X_19025639_19025644_+ 0.844700725 0.942816882 0.893758804 0.06937863 CG43759 FBtr0331156|FBtr0332994|FBtr0343982 19013347|19013347|19013347 19026872|19028629|19026872 X + 19025614 19025693 3'utr CG43759 FlyBase G62814.1 GGAATACAATACAAAGACTGCCTCATGCCATGCCATCCACTATTACCACCAACCCAACAGCGGCAGCAGCTATAGCAACT 26 19025644 0.964802389 7 24 114 0.878787879 1.462397998 0.060606061 0.192307692 0.363636364 26 4 0 29 X:19025614-19025693 6 CG43759 FBtr0343982|FBtr0332994|FBtr0331156 19013347|19013347|19013347 19026872|19028629|19026872 TGCCAT 6mer2-7 dme-miR-263a-5p X + 19025614 19025719 3'utr CG43759 FlyBase G47384.1 GGAATACAATACAAAGACTGCCTCATGCCATGCCATCCACTATTACCACCAACCCAACAGCGGCAGCAGCTATAGCAACTACAGTAGCCGTCGTCACCATCAGCAT 23 19025644 0.964634068 7 19 103 0.823529412 0.748188027 0.147058824 0.304347826 0.529411765 23 2 4 28 X:19025614-19025719 6 17.5 4152 FBgn0264090 9.64 0.236666667 0.363333333 1.815352697 73.94366197 48.16513761 -5 -5 -5 0.15 dme-miR-283-5p 8mer-m1 TGATATTT X 19028303 19028310 + X_19028303_19028310_+ 0.513499688 0.541990885 0.527745286 0.020146321 CG43759 FBtr0332994 19013347 19028629 X + 19028285 19028323 3'utr CG43759 FlyBase G62823.1 AACAAAAAGCTTAAAATGTGATATTTTATAAAAACTAAT 9 19028297 0.831170776 4 8 79 0.888888889 0.602059991 0 0 0 9 0 1 8 X:19028285-19028323 8 CG43759 FBtr0332994 19013347 19028629 TGATATTT 8mer-m1 dme-miR-283-5p X + 19028288 19028322 3'utr CG43759 FlyBase G47391.1 AAAAAGCTTAAAATGTGATATTTTATAAAAACTAA 7 19028308 0.670984184 4 6 58 0.818181818 0.954242509 0 0.428571429 0.636363636 7 2 0 9 X:19028288-19028322 8 8 4153 FBgn0264090 9.64 0.236666667 0.363333333 0.829875519 33.8028169 22.01834862 6 -5 0.5 0.15 dme-miR-283-5p 7mer-m8 TGATATT X 19136286 19136292 - X_19136286_19136292_- 0.603869874 0.606102973 0.604986423 0.00157904 RhoGAP18B FBtr0299623 19136105 19143584 X - 19136184 19136311 3'utr RhoGAP18B FlyBase G68832.1 TTACATCGTGTATAAGATGTGATATTCGCTGCAAATCGCAAAGCGTGAATATAATTTGTATTTATACCTATATTAATGAACCATATAAAATATACGAATAAAGTCCAATACAGTAGATAGGCTACACA 108 19136287 0.860845719 15 103 806 0.946153846 1.788875116 0.469230769 0.175925926 0.315384615 108 6 1 123 X:19136184-19136311 7 RhoGAP18B FBtr0299623 19136105 19143584 TGATATT 7mer-m8 dme-miR-283-5p X - 19136251 19136309 3'utr RhoGAP18B FlyBase G51775.2 ACATCGTGTATAAGATGTGATATTCGCTGCAAATCGCAAAGCGTGAATATAATTTGTAT 80 19136287 0.725032888 9 77 588 0.968992248 2.096910013 0.472868217 0.45 0.658914729 80 4 0 125 X:19136251-19136309 7 84.5 4154 FBgn0261461 2047.33 61.32666667 94.48 0.041273268 1.377867159 0.894369179 -5 -5 -5 0.15 dme-miR-34-5p 7mer-m8 CACTGCC X 19136353 19136359 - X_19136353_19136359_- 0.706436262 0.708775478 0.70760587 0.001654064 RhoGAP18B FBtr0299623 19136105 19143584 X - 19136337 19136380 3'utr RhoGAP18B FlyBase G68833.1 ACATTGTGGCGGTACAGTGAGCACTGCCTGCGGCCAACCTAAAA 27 19136352 0.818924862 4 27 112 1 1.505149978 0.4375 0.185185185 0.3125 27 0 0 32 X:19136337-19136380 7 RhoGAP18B FBtr0299623 19136105 19143584 CACTGCC 7mer-m8 dme-miR-34-5p X - 19136336 19136382 3'utr RhoGAP18B FlyBase G51776.1 AAACATTGTGGCGGTACAGTGAGCACTGCCTGCGGCCAACCTAAAAA 25 19136352 0.811062377 4 24 106 0.95 1.579783597 0.4 0.44 0.65 25 2 0 38 X:19136336-19136382 7 26 4155 FBgn0261461 2047.33 61.32666667 94.48 0.012699467 0.423959126 0.275190517 -7 -7 -7 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 19136463 19136468 - X_19136463_19136468_- 0.996760854 0.996807586 0.99678422 3.30E-05 RhoGAP18B FBtr0299623 19136105 19143584 X - 19136412 19136509 3'utr RhoGAP18B FlyBase G68834.1 AAATGGGAATTCGCATAGACGAGCCCATCACGAAAATACTTACCAAAAAAGACAGTAGACTAAGTTTATACTAAAGATAATTAGGGGAAACCGCAAGA 289 19136469 0.957733101 11 257 1219 0.887537994 1.766412847 0.285714286 0.131487889 0.237082067 289 33 4 292 X:19136412-19136509 6 RhoGAP18B FBtr0299623 19136105 19143584 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X - 19136412 19136481 3'utr RhoGAP18B FlyBase G51777.1 CACGAAAATACTTACCAAAAAAGACAGTAGACTAAGTTTATACTAAAGATAATTAGGGGAAACCGCAAGA 199 19136469 0.952415018 9 167 757 0.833876221 1.806179974 0.231270358 0.40201005 0.61237785 199 48 3 256 X:19136412-19136481 6 223.5 4156 FBgn0261461 2047.33 61.32666667 94.48 0.109166573 3.644417872 2.365580017 1 1 1 0.15 dme-miR-79-3p 7mer-A1 AGCTTTA X 19136566 19136572 - X_19136566_19136572_- 0.823347765 0.823342358 0.823345061 3.82E-06 RhoGAP18B FBtr0299623 19136105 19143584 X - 19136534 19136581 3'utr RhoGAP18B FlyBase G68835.1 TTTGTTGTCAGCTTTAAATGTACGTGTTTTATTGCTAATTTTAATGTT 9 19136568 0.984049746 7 9 92 1 1.230448921 0.058823529 0.444444444 0.705882353 9 0 0 17 X:19136534-19136581 7 RhoGAP18B FBtr0299623 19136105 19143584 AGCTTTA 7mer-A1 dme-miR-79-3p X - 19136533 19136579 3'utr RhoGAP18B FlyBase G51778.1 TGTTGTCAGCTTTAAATGTACGTGTTTTATTGCTAATTTTAATGTTC 7 19136575 0.995096408 5 5 64 0.636363636 0.84509804 0 0.285714286 0.545454545 7 4 0 7 X:19136533-19136579 7 6 4157 FBgn0261461 2047.33 61.32666667 94.48 0.002930646 0.097836721 0.063505504 -4 3 -0.5 0.15 dme-miR-2535b-3p 7mer-m1 CGTGAGT X 1915556 1915562 + X_1915556_1915562_+ 0.765586585 0.765473701 0.765530143 7.98E-05 Rbcn-3B FBtr0070316|FBtr0344155 1915333|1915333 1916174|1916825 X + 1915525 1915572 5'utr Rbcn-3B FlyBase G58117.1 GAAAATAAAAGTGCGGTAATGTATGGCGTTTCGTGAGTAGTTAAGGTA 10 1915547 0.939869701 6 9 73 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 X:1915525-1915572 7 Rbcn-3B FBtr0344155|FBtr0070316 1915333|1915333 1916825|1916174 CGTGAGT 7mer-m1 dme-miR-2535b-3p X + 1915535 1915572 5'utr Rbcn-3B FlyBase G43968.1 GTGCGGTAATGTATGGCGTTTCGTGAGTAGTTAAGGTA 5 1915546 0.763833871 4 4 39 1 1 0.1 0.6 0.8 5 0 0 10 X:1915535-1915572 7 6 4158 FBgn0023510 935.05 16.80666667 25.86333333 0.006416769 0.35700119 0.231988658 9 10 9.5 0.15 dme-miR-970-3p 6mer3-8 TCTTAT X 1915784 1915789 + X_1915784_1915789_+ 0.999802014 0.998816842 0.999309428 0.000696642 Rbcn-3B FBtr0070316|FBtr0344155 1915333|1915333 1916174|1916825 X + 1915740 1915901 5'utr Rbcn-3B FlyBase G58118.1 CGTATCTGTATGTATTTTAATGTATTACACGATTTTAATATGTCTCTTATTCGCCCCTCTGCGTTCTTTTTAATTTTTAGTGCCTAACTTTTACCCATACTCTTAGAACACGTATTTCTGTTTCTGTTTCTGTTTCTGTTTGTCGTTAATTTCCAATGCGGA 25 1915797 0.990431798 14 25 258 1 1.531478917 0.117647059 0.28 0.470588235 25 0 0 34 X:1915740-1915901 6 Rbcn-3B FBtr0344155|FBtr0070316 1915333|1915333 1916825|1916174 TCTTAT 6mer3-8 dme-miR-970-3p X + 1915786 1915809 5'utr Rbcn-3B FlyBase G43969.1 TTATTCGCCCCTCTGCGTTCTTTT 6 1915806 0.640503434 3 6 51 1 1.041392685 0 0.666666667 0.818181818 6 0 0 11 X:1915786-1915809 3 6 4159 FBgn0023510 935.05 16.80666667 25.86333333 0.006416769 0.35700119 0.231988658 -13 -22 -17.5 0.15 dme-miR-1008-3p 6mer3-8 AGCTGT X 1916032 1916037 + X_1916032_1916037_+ 0.999866146 0.987956501 0.993911324 0.008421359 Rbcn-3B FBtr0070316|FBtr0344155 1915333|1915333 1916174|1916825 X + 1915965 1916080 5'utr Rbcn-3B FlyBase G58119.1 AAGCAAACACAACTACACGAGAAAAGCAAAGGAAATGAAAAACGAAAAAAAAAAACAAAGAATGAAAAGCTGTTATTATTATTACTCAACTATTATTATTACTATTGTATGCTACT 24 1916040 0.989185921 9 20 167 0.833333333 1.096910013 0 0.208333333 0.366666667 24 4 1 25 X:1915965-1916080 6 Rbcn-3B FBtr0344155|FBtr0070316 1915333|1915333 1916825|1916174 AGCTGT 6mer3-8 dme-miR-1008-3p X + 1916013 1916089 5'utr Rbcn-3B FlyBase G43970.1 AAAAAAACAAAGAATGAAAAGCTGTTATTATTATTACTCAACTATTATTATTACTATTGTATGCTACTATTATTATT 11 1916040 0.995025947 6 8 108 0.571428571 0.903089987 0.071428571 0.181818182 0.357142857 11 6 0 8 X:1916013-1916089 6 12 4160 FBgn0023510 935.05 16.80666667 25.86333333 0.012833538 0.71400238 0.463977317 -8 -8 -8 0.15 dme-miR-252-5p 6mer3-8 GTACTT X 19176929 19176934 - X_19176929_19176934_- 0.999957063 0.999975153 0.999966108 1.28E-05 CG7556 FBtr0343313 19176107 19177281 X - 19176910 19176968 3'utr CG7556 FlyBase G68880.1 TGTCAGGGATAAAGCCATCGATGATAGATACGGTGTACTTCCAGGTTAGTAACTAATAA 6 19176932 0.985865214 4 6 44 1 0.77815125 0.333333333 0 0 6 0 0 6 X:19176910-19176968 6 CG7556 FBtr0343313 19176107 19177281 GTACTT 6mer3-8 dme-miR-252-5p X - 19176920 19176959 3'utr CG7556 FlyBase G51808.1 TAAAGCCATCGATGATAGATACGGTGTACTTCCAGGTTAG 7 19176938 0.789307022 3 5 42 0.8 0.602059991 0.4 0.285714286 0.5 7 1 1 8 X:19176920-19176959 6 5 4161 FBgn0030990 550.2733333 27.66666667 42.21666667 0.009086393 0.180722892 0.118436636 -2 4 1 0.15 dme-miR-14-3p 6mer3-8 AAGACT X 19177182 19177187 - X_19177182_19177187_- 0.975580514 0.931794437 0.953687475 0.030961448 CG7556 FBtr0074697|FBtr0343313 19176995|19176107 19177281|19177281 X - 19176997 19177204 3'utr CG7556 FlyBase G68881.1 TTTTATACTTTGCATTAAAGACTCTCTGGCATAGCATTTTGGACCTTGCCAATCCTAATCCGCGGCCCGATCCTCTGCCCCTTCCCTGACCTTCTGTTTCCATCACCGTGTGTAGCGCTTATCTTATGTTTTGTACATAATTCTATATTGTAAACATCTAAATGTCGATTAATTCCTTTGCTAAGTAAACGAAATGTAAGAGGAAGTG 139 19177179 0.922892446 35 131 949 0.937888199 2.178976947 0.167701863 0.143884892 0.260869565 139 10 0 151 X:19176997-19177204 6 CG7556 FBtr0074697|FBtr0343313 19176995|19176107 19177281|19177281 AAGACT 6mer3-8 dme-miR-14-3p X - 19177112 19177200 3'utr CG7556 FlyBase G51809.2 ATACTTTGCATTAAAGACTCTCTGGCATAGCATTTTGGACCTTGCCAATCCTAATCCGCGGCCCGATCCTCTGCCCCTTCCCTGACCTT 66 19177179 0.789691898 15 56 404 0.842105263 1.124938737 0.115789474 0.333333333 0.536842105 66 10 5 80 X:19177112-19177200 6 64.5 4162 FBgn0030990 550.2733333 27.66666667 42.21666667 0.117214475 2.331325301 1.52783261 -8 -8 -8 0.15 dme-miR-995-5p 6mer3-8 AATTCG X 19181511 19181516 + X_19181511_19181516_+ 0.686628712 0.777832903 0.732230807 0.064491108 CG7453 FBtr0074666 19181192 19182024 X + 19181221 19181685 3'utr CG7453 FlyBase G62831.1 AAGGGCGGCCACTTCACCGGGTGCTCCAACGCCTCCTCCGGCGCACTCGGATGATTATTAGTTGTTTAAGTTATACACGACTGGACGTGCTTGCATTCAATGCAAGATCGCCGGATCGAAAGCAGAGTGAGAGTAGCGGAGAGCAGAGGAGGCGGTGGGAAAACGAAACGAAACTATGATATTGCTCAGTCAATTAGAGGAGGAGGAGAAAGGGATTCGCTTTGCAGCGTGGCTAGGATACCCTTCCGAGCGGCCAAATTGAATTTAAAGCCAACTGATTTTCAACACTAAATTCGAGTGGACTCTTAAGTTTAAGCATTTGGATTATTGTCAAGCATTTGTTAGCAATCAAAAATTGATACCGGCACTTATATGTACCCTATATATACATATATCTACTTAGGCTGCTGCTGTACATCGAAGGCTGCGGACTCTCAACCATCAACCATCAACATCAACATCAGC 372 19181519 0.977527574 68 357 2353 0.963218391 2.622214023 0.222988506 0.14516129 0.268965517 372 16 0 419 X:19181221-19181685 6 CG7453 FBtr0074666 19181192 19182024 AATTCG 6mer3-8 dme-miR-995-5p X + 19181225 19181670 3'utr CG7453 FlyBase G47396.1 GCGGCCACTTCACCGGGTGCTCCAACGCCTCCTCCGGCGCACTCGGATGATTATTAGTTGTTTAAGTTATACACGACTGGACGTGCTTGCATTCAATGCAAGATCGCCGGATCGAAAGCAGAGTGAGAGTAGCGGAGAGCAGAGGAGGCGGTGGGAAAACGAAACGAAACTATGATATTGCTCAGTCAATTAGAGGAGGAGGAGAAAGGGATTCGCTTTGCAGCGTGGCTAGGATACCCTTCCGAGCGGCCAAATTGAATTTAAAGCCAACTGATTTTCAACACTAAATTCGAGTGGACTCTTAAGTTTAAGCATTTGGATTATTGTCAAGCATTTGTTAGCAATCAAAAATTGATACCGGCACTTATATGTACCCTATATATACATATATCTACTTAGGCTGCTGCTGTACATCGAAGGCTGCGGACTCTCAACCATCAACCATC 247 19181519 0.978740321 64 228 1549 0.930294906 2.06320822 0.222520107 0.380566802 0.589812332 247 24 2 347 X:19181225-19181670 6 67.5 4163 FBgn0030991 1383.076667 90.74333333 138.8333333 0.048804236 0.743856298 0.486194478 -8 -8 -8 0.15 dme-miR-277-3p 7mer-A1 GCATTTA X 19181804 19181810 + X_19181804_19181810_+ 0.823046643 0.70949428 0.766270462 0.080293601 CG7453 FBtr0074666 19181192 19182024 X + 19181706 19181846 3'utr CG7453 FlyBase G62832.1 GCATCCACAATCTAGCCGTAATGTGCCTTACGAACCAGCTCTATATACACCTTTACACATGATATTCTCCATCGCCGGGTCTTCGAGGTGATTTCTTCGCATTTACTTTACGCAACCAAGCAGCAGCACTCACTCAAAAAA 87 19181798 0.878989673 20 72 593 0.831858407 1.672097858 0.17699115 0.218390805 0.398230088 87 18 1 94 X:19181706-19181846 7 CG7453 FBtr0074666 19181192 19182024 GCATTTA 7mer-A1 dme-miR-277-3p X + 19181714 19181814 3'utr CG7453 FlyBase G47397.1 AATCTAGCCGTAATGTGCCTTACGAACCAGCTCTATATACACCTTTACACATGATATTCTCCATCGCCGGGTCTTCGAGGTGATTTCTTCGCATTTACTTT 26 19181798 0.948156797 13 25 194 0.975 1.290034611 0.225 0.384615385 0.6 26 0 1 39 X:19181714-19181814 7 6 4164 FBgn0030991 1383.076667 90.74333333 138.8333333 0.004338154 0.06612056 0.043217287 6 6 6 0.15 dme-miR-1006-3p 6mer2-7 GAATTT X 19195673 19195678 + X_19195673_19195678_+ 0.999998929 0.99993719 0.999968059 4.36E-05 CG14194 FBtr0074671|FBtr0336701 19195450|19195450 19196037|19196037 X + 19195652 19195723 3'utr CG14194 FlyBase G62849.1 CGTAGCTTTTAGACTTGTACTGAATTTTAATTGTAAGACAAACGCTAACACCGCCCACGAACCATGTCCAAC 30 19195668 0.99173232 11 25 263 0.828571429 0.985276743 0.085714286 0.1 0.228571429 30 4 2 29 X:19195652-19195723 6 CG14194 FBtr0336701|FBtr0074671 19195450|19195450 19196037|19196037 GAATTT 6mer2-7 dme-miR-1006-3p X + 19195649 19195693 3'utr CG14194 FlyBase G47405.1 CGTCGTAGCTTTTAGACTTGTACTGAATTTTAATTGTAAGACAAA 11 19195668 0.740565461 8 9 95 0.785714286 1.041392685 0.071428571 0.272727273 0.428571429 11 3 0 11 X:19195649-19195693 6 17 4165 FBgn0030996 477.9966667 30.26333333 46.23333333 0.035565102 0.561735874 0.367700072 5 5 5 0.15 dme-miR-79-3p 7mer-m8 TAGCTTT X 1920072 1920078 + X_1920072_1920078_+ 0.540326675 0.446182309 0.493254492 0.066570144 mip130 FBtr0070315 1919933 1920318 X + 1920016 1920097 3'utr mip130 FlyBase G58124.1 TCGTGAAAAGTTTTCAATAATACGCTGCAATAGGAAATTTAACAAAATAATCCGCATAGCTTTCTGACTGACTATCGTTTTT 16 1920077 0.899237691 7 14 119 1 1.255272505 0.222222222 0.125 0.222222222 16 0 0 18 X:1920016-1920097 7 mip130 FBtr0070315 1919933 1920318 TAGCTTT 7mer-m8 dme-miR-79-3p X + 1920069 1920095 3'utr mip130 FlyBase G43972.1 GCATAGCTTTCTGACTGACTATCGTTT 6 1920078 0.64624471 3 5 46 0.833333333 0.698970004 0 0 0 6 1 0 5 X:1920069-1920095 7 7 4166 FBgn0023509 646.0033333 22.50333333 34.39333333 0.010835857 0.311065027 0.203527815 -5 -6 -5.5 0.15 dme-miR-305-5p 6mer3-8 AGTACA X 19202190 19202195 - X_19202190_19202195_- 0.871768664 0.700172248 0.785970456 0.121337049 Ulp1 FBtr0074693 19202101 19202871 X - 19202191 19202224 3'utr Ulp1 FlyBase G68891.1 GTAAAGATTTTCTCTAACCCTTAGGAAGTAGTAC 12 19202212 0.680243243 3 10 92 0.875 1.146128036 0.0625 0.25 0.4375 12 2 0 14 X:19202191-19202224 4 Ulp1 FBtr0074693 19202101 19202871 AGTACA 6mer3-8 dme-miR-305-5p X - 19202187 19202221 3'utr Ulp1 FlyBase G51815.1 AAGATTTTCTCTAACCCTTAGGAAGTAGTACACCT 5 19202216 0.73467123 4 5 38 1 0.903089987 0.375 0.6 0.75 5 0 0 8 X:19202187-19202221 6 3 4167 FBgn0027603 2154.723333 47.38666667 72.81666667 0.00139229 0.063308948 0.041199359 17 21 19 0.15 dme-miR-190-5p 7mer-m1 CATATCT X 19202690 19202696 - X_19202690_19202696_- 0.636758586 0.761734106 0.699246346 0.088371024 Ulp1 FBtr0074693 19202101 19202871 X - 19202584 19202731 3'utr Ulp1 FlyBase G68895.2 TGGCTGAGACCCCTGCTGGTGCATTAACTTGTTCTCATATCTGATTGTAAAAGAGAATCTATTTCTTCAATAAAATGTCACCAAGTAAAAGCGATGCGAATAAGGATGTATTAATCGCCGAATATCTTCAAGTTTATAATTAATATTT 53 19202703 0.931505506 17 49 429 0.935483871 1.763427994 0.338709677 0.169811321 0.290322581 53 4 0 58 X:19202584-19202731 7 Ulp1 FBtr0074693 19202101 19202871 CATATCT 7mer-m1 dme-miR-190-5p X - 19202684 19202734 3'utr Ulp1 FlyBase G51821.1 AGATGGCTGAGACCCCTGCTGGTGCATTAACTTGTTCTCATATCTGATTGT 19 19202703 0.989708999 7 19 181 1 1.431363764 0.222222222 0.368421053 0.555555556 19 0 0 27 X:19202684-19202734 7 16.5 4168 FBgn0027603 2154.723333 47.38666667 72.81666667 0.007657596 0.348199212 0.226596475 7 7 7 0.15 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA X 19202822 19202827 - X_19202822_19202827_- 1 0.725290284 0.862645142 0.194249092 Ulp1 FBtr0074693|FBtr0074693 19202101|19202101 19202871|19202871 X - 19202810 19202887 stop_codon Ulp1 FlyBase G68896.1 AAAGTTGTGGCAGTAGGGGTTCAAGCACAAAACTACGCAAAAATGGAGAATTCAGTTCTTTACTTATTTTTACAAATC 12 19202837 0.966966306 7 12 74 1 1.113943352 0.076923077 0.083333333 0.153846154 12 0 0 13 X:19202810-19202887 6 Ulp1 FBtr0074693|FBtr0074693 19202101|19202101 19202871|19202871 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" X - 19202811 19202875 stop_codon Ulp1 FlyBase G51822.1 GTAGGGGTTCAAGCACAAAACTACGCAAAAATGGAGAATTCAGTTCTTTACTTATTTTTACAAAT 10 19202837 0.969586443 6 9 61 1 1.113943352 0.153846154 0.3 0.461538462 10 0 0 13 X:19202811-19202875 6 5.5 4169 FBgn0027603 2154.723333 47.38666667 72.81666667 0.002552532 0.116066404 0.075532158 10 10 10 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 19245030 19245036 + X_19245030_19245036_+ 0.823301121 0.823303805 0.823302463 1.91E-06 CG7889 FBtr0074675 19244824 19245224 X + 19245016 19245051 3'utr CG7889 FlyBase G62859.1 TTTGTATCTAATTTCCAAAGAATTTGACTTAAGCAG 16 19245028 0.782570765 3 16 133 1 1.230448921 0.235294118 0.0625 0.117647059 16 0 0 17 X:19245016-19245051 7 CG7889 FBtr0074675 19244824 19245224 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X + 19245015 19245052 3'utr CG7889 FlyBase G47411.1 TTTTGTATCTAATTTCCAAAGAATTTGACTTAAGCAGT 11 19245028 0.781801197 3 11 116 1 1.146128036 0.428571429 0.181818182 0.357142857 11 0 0 14 X:19245015-19245052 7 13.5 4170 FBgn0031003 189 15.83 24.33666667 0.071428571 0.852811118 0.554718532 2 2 2 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA X 19252280 19252287 - X_19252280_19252287_- 0.49908241 0.499778135 0.499430273 0.000491934 rictor FBtr0074689|FBtr0343634|FBtr0343635 19252109|19252109|19252109 19252721|19252721|19252721 X - 19252263 19252312 3'utr rictor FlyBase G68918.1 AACCACCGCAATTTATTTAATTAATGTACTTAAAACTAAAAGAGACCCAG 42 19252288 0.978746993 2 41 298 0.980392157 1.397940009 0 0.19047619 0.333333333 42 0 1 50 X:19252263-19252312 8 rictor FBtr0343634|FBtr0343635|FBtr0074689 19252109|19252109|19252109 19252721|19252721|19252721 GTACTTAA 8mer-A1 dme-miR-252-5p X - 19252273 19252300 3'utr rictor FlyBase G51841.1 TTATTTAATTAATGTACTTAAAACTAAA 22 19252288 0.731338914 2 22 170 1 1.51851394 0 0.409090909 0.606060606 22 0 0 33 X:19252273-19252300 8 32 4171 FBgn0031006 604.1266667 11.03 16.89666667 0.052969024 2.901178604 1.893864668 1 1 1 0.15 dme-miR-34-5p 7mer-m8 CACTGCC X 19252673 19252679 - X_19252673_19252679_- 0.708950745 0.708953284 0.708952014 1.84E-06 rictor FBtr0074689|FBtr0343634|FBtr0343635 19252109|19252109|19252109 19252721|19252721|19252721 X - 19252639 19252730 stop_codon rictor FlyBase G68921.1 AACTCCTAGACGCACTGGCGGAAGATCAATTGAAGTAGCCCAATGGGGACGCACTGCCTACTCTTACATCTCGTTTACTGGCCGCCCGCCTT 16 19252672 0.95481563 8 15 76 0.947368421 1.255272505 0.105263158 0.1875 0.315789474 16 1 0 18 X:19252639-19252730 7 rictor FBtr0343634|FBtr0343635|FBtr0074689 19252109|19252109|19252109 19252721|19252721|19252721 CACTGCC 7mer-m8 dme-miR-34-5p X - 19252636 19252688 3'utr rictor FlyBase G51844.1 ATGGGGACGCACTGCCTACTCTTACATCTCGTTTACTGGCCGCCCGCCTTCCT 7 19252670 0.966802684 7 7 36 1 0.84509804 0 0 0 7 0 0 7 X:19252636-19252688 7 6 4172 FBgn0031006 604.1266667 11.03 16.89666667 0.009931692 0.543970988 0.355099625 -7 -9 -8 0.15 dme-miR-980-3p 7mer-A1 GCAGCTA X 19271799 19271805 + X_19271799_19271805_+ 0.818832872 0.819515196 0.819174034 0.000482459 Vav FBtr0074678|FBtr0333759|FBtr0113316|FBtr0074677 19271577|19271577|19271577|19271577 19273280|19272089|19272089|19272089 X + 19271770 19271830 3'utr Vav FlyBase G62875.1 CGATGTCGCCAGTCACAGCAACAACAATTGCAGCTAGATCGTAGCCTAGTTAAATGTATAC 213 19271797 0.827167595 5 209 843 0.98015873 2.392696953 0.130952381 0.145539906 0.277777778 213 5 0 247 X:19271770-19271830 7 Vav FBtr0113316|FBtr0074677|FBtr0074678|FBtr0333759 19271577|19271577|19271577|19271577 19272089|19272089|19273280|19272089 GCAGCTA 7mer-A1 dme-miR-980-3p X + 19271759 19271825 3'utr Vav FlyBase G47422.1 GAGGCCGTGGCCGATGTCGCCAGTCACAGCAACAACAATTGCAGCTAGATCGTAGCCTAGTTAAATG 138 19271797 0.932630892 3 135 504 0.982758621 2.357934847 0.163793103 0.463768116 0.681034483 138 4 0 228 X:19271759-19271825 7 174.5 4173 FBgn0040068 329.8133333 9.073333333 13.89 0.52908716 19.23218222 12.56299496 2 2 2 0.15 dme-miR-263a-5p 6mer3-8 GTGCCA X 19271941 19271946 + X_19271941_19271946_+ 0.970372525 0.968337138 0.969354831 0.001439245 Vav FBtr0074678|FBtr0333759|FBtr0113316|FBtr0074677 19271577|19271577|19271577|19271577 19273280|19272089|19272089|19272089 X + 19271916 19271963 3'utr Vav FlyBase G62876.1 TTTGCGTCGTCTGCTCGAAACATTTGTGCCAATCACCGGAAAATTACA 6 19271939 0.957373768 5 6 33 1 0.954242509 0 0.5 0.666666667 6 0 0 9 X:19271916-19271963 6 Vav FBtr0113316|FBtr0074677|FBtr0074678|FBtr0333759 19271577|19271577|19271577|19271577 19272089|19272089|19273280|19272089 GTGCCA 6mer3-8 dme-miR-263a-5p X + 19271918 19271960 3'utr Vav FlyBase G47423.1 TGCGTCGTCTGCTCGAAACATTTGTGCCAATCACCGGAAAATT 5 19271948 0.956761419 3 5 30 1 0.84509804 0 0.2 0.428571429 5 0 0 7 X:19271918-19271960 6 5.5 4174 FBgn0040068 329.8133333 9.073333333 13.89 0.0166761 0.606171932 0.395968323 2 -7 -2.5 0.15 dme-miR-252-5p 6mer3-8 GTACTT X 19272255 19272260 + X_19272255_19272260_+ 0.999818634 0.984125872 0.991972253 0.011096415 Vav FBtr0074678 19271577 19273280 X + 19272250 19272310 3'utr Vav FlyBase G62877.1 TTATTGTACTTGTACTGGTAGATATTTAACCCTAGTTGAAACGCAAATGTTAACATAACGA 10 19272259 0.995386593 6 7 95 0.538461538 0.84509804 0.076923077 0.1 0.307692308 10 6 0 7 X:19272250-19272310 6 Vav FBtr0074678 19271577 19273280 GTACTT 6mer3-8 dme-miR-252-5p X + 19272252 19272287 3'utr Vav FlyBase G47424.1 ATTGTACTTGTACTGGTAGATATTTAACCCTAGTTG 5 19272261 0.958274403 4 5 52 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 X:19272252-19272287 6 5.5 4175 FBgn0040068 329.8133333 9.073333333 13.89 0.0166761 0.606171932 0.395968323 -4 -6 -5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 19272508 19272513 + X_19272508_19272513_+ 0.999999586 0.994837846 0.997418716 0.003649944 Vav FBtr0074678 19271577 19273280 X + 19272451 19272563 3'utr Vav FlyBase G62879.1 TATAGATATCTATACCTATAACTATAACTATACCTAATAACTATAACTAACTATAATGTACCTATTTATATAGCCAACGAATCACCTTGCGAACTTGATGGATGATGAGTCGA 14 19272507 0.982620591 8 14 105 1 1.204119983 0.125 0.142857143 0.25 14 0 0 16 X:19272451-19272563 6 Vav FBtr0074678 19271577 19273280 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X + 19272482 19272524 3'utr Vav FlyBase G47425.1 ACCTAATAACTATAACTAACTATAATGTACCTATTTATATAGC 5 19272507 0.984288311 2 5 51 1 0.698970004 0 0 0 5 0 0 5 X:19272482-19272524 6 6 4176 FBgn0040068 329.8133333 9.073333333 13.89 0.018192109 0.661278472 0.431965443 1 1 1 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT X 19273140 19273146 + X_19273140_19273146_+ 0.658996449 0.658999527 0.658997988 2.19E-06 Vav FBtr0074678 19271577 19273280 X + 19273108 19273165 3'utr Vav FlyBase G62880.1 CGCTCGCCTGCTGTCCCTTTCCCTTTCGCATCGGCAGCTCCAAAATTATTGTTAAGTA 15 19273138 0.892096526 5 14 132 0.933333333 1.146128036 0 0 0 15 1 0 14 X:19273108-19273165 7 Vav FBtr0074678 19271577 19273280 GGCAGCT 7mer-m8 dme-miR-980-3p X + 19273117 19273164 3'utr Vav FlyBase G47426.1 GCTGTCCCTTTCCCTTTCGCATCGGCAGCTCCAAAATTATTGTTAAGT 13 19273137 0.795250234 8 12 102 0.952380952 1.301029996 0 0.307692308 0.571428571 13 1 0 20 X:19273117-19273164 7 12.5 4177 FBgn0040068 329.8133333 9.073333333 13.89 0.037900226 1.377663483 0.899928006 2 3 2.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 19281978 19281983 - X_19281978_19281983_- 0.887146491 0.89075038 0.888948435 0.002548342 CG8034 FBtr0074684 19281230 19282726 X - 19281954 19282081 3'utr CG8034 FlyBase G68977.1 AATCACTACTTATAGAAATACTGATATCTGCATCTGAAGATACATCGATGTGACAGGAAGATGAGGAAGGAGTGTTGAAAATTGATCGGCTTTAAAATGTACCTAAGGAGCGAAGTTAAGCAGCGACA 615 19281984 0.833484641 21 601 3561 0.981767181 2.544068044 0.227208976 0.133333333 0.252454418 615 12 1 700 X:19281954-19282081 6 CG8034 FBtr0074684 19281230 19282726 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X - 19281941 19282077 3'utr CG8034 FlyBase G51880.1 ACTACTTATAGAAATACTGATATCTGCATCTGAAGATACATCGATGTGACAGGAAGATGAGGAAGGAGTGTTGAAAATTGATCGGCTTTAAAATGTACCTAAGGAGCGAAGTTAAGCAGCGACAAAACAATTAAACT 363 19281984 0.980909013 18 350 2028 0.965048544 2.219235134 0.203883495 0.339779006 0.53592233 362 16 2 497 X:19281941-19282077 6 437.5 4178 FBgn0031011 3073.103333 84.54333333 130.1433333 0.142364233 5.174861018 3.36167815 1 1 1 0.15 dme-miR-14-3p 7mer-A1 AGACTGA X 19485920 19485926 - X_19485920_19485926_- 0.820593568 0.821027078 0.820810323 0.000306531 pcm FBtr0302082|FBtr0074784 19485757|19485878 19486102|19486102 X - 19485901 19485952 3'utr pcm FlyBase G69024.1 TTGCGGATTATGTGAATACTAAAATGAGACTGACTCGTCTTTATATTTTTTC 220 19485928 0.932390553 8 214 1370 0.98467433 2.409933123 0.340996169 0.154545455 0.287356322 220 4 0 257 X:19485901-19485952 7 pcm FBtr0302082|FBtr0074784 19485757|19485878 19486102|19486102 AGACTGA 7mer-A1 dme-miR-14-3p X - 19485880 19485960 3'utr pcm FlyBase G51910.1 TTTTAGAGTTGCGGATTATGTGAATACTAAAATGAGACTGACTCGTCTTTATATTTTTTCAATAAACTGGACTTTACCCAT 122 19485928 0.922353502 11 118 715 0.963190184 2.195899652 0.306748466 0.303278689 0.478527607 122 6 0 157 X:19485880-19485960 7 154.5 4179 FBgn0020261 395.3566667 9.006666667 13.76666667 0.390786379 17.15396003 11.22276029 2 2 2 0.15 dme-miR-980-3p 6mer3-8 GGCAGC X 19493374 19493379 - X_19493374_19493379_- 0.999737479 0.999593601 0.99966554 0.000101753 CG12204 FBtr0074783 19493290 19493407 X - 19493341 19493393 3'utr CG12204 FlyBase G69031.1 GTGCCGCTTCCATTGGCAGCGAAACTGGTGGCCATTACATGGTGCTGTGGTCA 7 19493380 0.967141724 4 7 42 1 0.954242509 0.666666667 0.285714286 0.444444444 7 0 0 9 X:19493341-19493393 6 CG12204 FBtr0074783 19493290 19493407 GGCAGC 6mer3-8 dme-miR-980-3p X - 19493357 19493401 3'utr CG12204 FlyBase G51915.2 ATGTGATGGTGCCGCTTCCATTGGCAGCGAAACTGGTGGCCATTA 8 19493381 0.810611491 2 7 39 0.9375 0.875061263 0.5625 0.375 0.6875 8 0 1 15 X:19493357-19493401 6 6 4180 FBgn0031022 64 7.23 11.12666667 0.09375 0.829875519 0.539245057 1 2 1.5 0.15 dme-miR-308-3p 7mer-m1 TGTGATT X 19508833 19508839 + X_19508833_19508839_+ 0.521209309 0.521091607 0.521150458 8.32E-05 Pfrx FBtr0074713|FBtr0074717|FBtr0074715|FBtr0307193|FBtr0074716|FBtr0074714|FBtr0074720|FBtr0307194|FBtr0339439|FBtr0339440|FBtr0074718|FBtr0307192|FBtr0074719 19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526 19509350|19509350|19509350|19509350|19508902|19509350|19509350|19509350|19509350|19509350|19509350|19509350|19509350 X + 19508723 19508869 3'utr Pfrx FlyBase G62900.1 AGACACGGACGTGGTCATGCGAGGGCAACACTGACAACTGCTCCTGCACCTGCTCCAAGGATGTGGTGGCATCTCTACTTAACGTGGCGTCGAAGGACTGCGTATGAAATTGTGATTGATCCATTGTGCTGTTTTATTATGTACTTT 182 19508832 0.988207279 16 177 1612 0.964912281 1.643452676 0.057017544 0.203296703 0.364035088 182 4 4 220 X:19508723-19508869 7 Pfrx FBtr0074714|FBtr0074716|FBtr0074719|FBtr0339440|FBtr0307194|FBtr0074718|FBtr0339439|FBtr0307192|FBtr0074720|FBtr0074713|FBtr0074717|FBtr0074715|FBtr0307193 19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526 19509350|19508902|19509350|19509350|19509350|19509350|19509350|19509350|19509350|19509350|19509350|19509350|19509350 TGTGATT 7mer-m1 dme-miR-308-3p X + 19508773 19508873 3'utr Pfrx FlyBase G47437.1 TGCTCCAAGGATGTGGTGGCATCTCTACTTAACGTGGCGTCGAAGGACTGCGTATGAAATTGTGATTGATCCATTGTGCTGTTTTATTATGTACTTTAATG 122 19508832 0.965571548 18 117 1095 0.957894737 1.561101384 0.068421053 0.409836066 0.621052632 122 4 4 182 X:19508773-19508873 7 125.5 4181 FBgn0027621 67 2.486666667 3.756666667 1.873134328 50.4691689 33.40727595 1 1 1 0.15 dme-miR-33-5p 7mer-A1 AATGCAA X 19518469 19518475 - X_19518469_19518475_- 0.776322672 0.756690566 0.766506619 0.013881991 l(1)G0156 FBtr0307904 19518426 19519286 X - 19518436 19518516 3'utr l(1)G0156 FlyBase G69036.1 ATGAAATGAAGGCAATTGTTATTAATAGTTAAGCGAATTGTAATGCAAAGTCATCATGCAATTGTTAAAACTCAATAAAGG 30 19518478 0.98233379 8 29 221 0.914285714 1.505149978 0.057142857 0.133333333 0.257142857 30 3 0 32 X:19518436-19518516 7 l(1)G0156 FBtr0307904 19518426 19519286 AATGCAA 7mer-A1 dme-miR-33-5p X - 19518453 19518527 3'utr l(1)G0156 FlyBase G51919.1 ATACAAATGCTATGAAATGAAGGCAATTGTTATTAATAGTTAAGCGAATTGTAATGCAAAGTCATCATGCAATTG 17 19518478 0.986283148 6 15 130 0.956521739 1.342422681 0.173913043 0.294117647 0.47826087 17 1 0 22 X:19518453-19518527 7 19.5 4182 FBgn0027291 1766.01 106.06 162.5666667 0.01104184 0.183858193 0.119950789 3 3 3 0.15 dme-miR-304-5p 7mer-A1 GAGATTA X 19529975 19529981 + X_19529975_19529981_+ 0.823341368 0.82330466 0.823323014 2.60E-05 CoRest FBtr0302864|FBtr0307903|FBtr0302862|FBtr0302863 19529756|19529756|19529756|19529756 19530896|19530896|19530896|19530896 X + 19529941 19530015 3'utr CoRest FlyBase G62931.1 AAAAGAAAGCATCACGGCTTTATCTAGGCTTGTAGAGATTAGTTCGTTTGTATTTGAGGTAACCTTGAGACAGTT 14 19529971 0.987418659 7 14 123 1 1.204119983 0.1875 0.142857143 0.25 14 0 0 16 X:19529941-19530015 7 CoRest FBtr0302862|FBtr0302863|FBtr0302864|FBtr0307903 19529756|19529756|19529756|19529756 19530896|19530896|19530896|19530896 GAGATTA 7mer-A1 dme-miR-304-5p X + 19529900 19530016 3'utr CoRest FlyBase G47462.1 TTCTCTTAATTGTCTTTAAACTTGGGACGCATTTATCGTAAAAAAGAAAGCATCACGGCTTTATCTAGGCTTGTAGAGATTAGTTCGTTTGTATTTGAGGTAACCTTGAGACAGTTC 21 19529971 0.986639322 12 20 173 0.941176471 1.505149978 0.117647059 0.428571429 0.647058824 21 2 0 32 X:19529900-19530016 7 10 4183 FBgn0261573 1764.736667 66.82333333 102.5833333 0.005666568 0.149648326 0.097481722 4 4 4 0.15 dme-miR-318-3p 6mer2-7 CCAGTG X 19561263 19561268 - X_19561263_19561268_- 0.539579393 0.550209275 0.544894334 0.007516474 Grip84 FBtr0343590 19559429 19561576 X - 19561250 19561272 3'utr Grip84 FlyBase G69050.1 TAAGCCAGTGGCGTAGATTGCAG 156 19561264 0.915576815 4 154 625 0.986547085 2.342422681 0 0.307692308 0.515695067 156 3 0 220 X:19561250-19561272 6 Grip84 FBtr0343590 19559429 19561576 CCAGTG 6mer2-7 dme-miR-318-3p X - 19561251 19561272 3'utr Grip84 FlyBase G51929.1 TAAGCCAGTGGCGTAGATTGCA 111 19561264 0.902518473 4 106 448 0.967948718 1.701855693 0 0.324324324 0.519230769 111 3 2 151 X:19561251-19561272 6 133.5 4184 FBgn0026430 457.6666667 17.04666667 26.22666667 0.291697014 7.831443097 5.090238943 -4 -4 -4 0.15 dme-miR-33-5p 7mer-A1 AATGCAA X 19570430 19570436 - X_19570430_19570436_- 0.772733109 0.749876584 0.761304846 0.016161986 Tao FBtr0303999 19569719 19571580 X - 19570403 19570482 3'utr Tao FlyBase G69056.1 ATATATATATACATAAAACTAAAGTAAGCCTATTTTAGAGTTAATTAATGCAAATTGCAAAATGCTTAGTCAAAACAATA 16 19570419 0.796402031 7 15 101 1 1.204119983 0 0.066666667 0.125 15 0 0 16 X:19570403-19570482 7 Tao FBtr0303999 19569719 19571580 AATGCAA 7mer-A1 dme-miR-33-5p X - 19570388 19570431 3'utr Tao FlyBase G51933.1 AAATTGCAAAATGCTTAGTCAAAACAATAAAAATTGTATAGAAA 9 19570419 0.970550671 5 7 41 1 1.041392685 0.181818182 0.222222222 0.363636364 9 0 0 11 X:19570388-19570431 2 5 4185 FBgn0031030 4262.23 160.5366667 246.0233333 0.001173095 0.031145533 0.020323276 -17 -17 -17 0.15 dme-miR-283-5p 8mer-A1 TGATATTA X 19570999 19571006 - X_19570999_19571006_- 0.592137914 0.592191251 0.592164583 3.78E-05 Tao FBtr0304000|FBtr0303999 19570645|19569719 19571580|19571580 X - 19570967 19571018 5'utr Tao FlyBase G69059.1 TAAAGTCTAATTTGATATTATTACCGGATAACTGAATCAATCACACAATTTT 8 19571007 0.995075438 3 6 73 0.8 0.903089987 0.4 0.25 0.4 8 2 0 8 X:19570967-19571018 8 Tao FBtr0304000|FBtr0303999 19570645|19569719 19571580|19571580 TGATATTA 8mer-A1 dme-miR-283-5p X - 19570974 19571030 5'utr Tao FlyBase G51935.1 AAGTGTTTAAATTAAAGTCTAATTTGATATTATTACCGGATAACTGAATCAATCACA 8 19571007 0.983233516 4 7 72 1 1.146128036 0.142857143 0.625 0.785714286 8 0 0 14 X:19570974-19571030 8 6.5 4186 FBgn0031030 4262.23 160.5366667 246.0233333 0.001525023 0.040489193 0.026420258 1 1 1 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG X 19615481 19615486 + X_19615481_19615486_+ 0.999999974 0.999999443 0.999999708 4.24E-07 Shawn FBtr0074739|FBtr0344069|FBtr0074738|FBtr0074737 19615415|19615415|19615415|19615415 19615617|19615617|19615596|19615617 X + 19615419 19615512 3'utr Shawn FlyBase G62963.1 GCGCTCCCAATGCGGTGACCACAGCATGTCGACGTGAATCTTTGTACATATGTAGATTAATGCCAAAGTTGCCAGGAAATCGGTGGGCAGGTGG 18 19615479 0.969877113 6 16 96 0.947368421 1.255272505 0.473684211 0.055555556 0.105263158 18 1 0 18 X:19615419-19615512 6 Shawn FBtr0074737|FBtr0074738|FBtr0344069|FBtr0074739 19615415|19615415|19615415|19615415 19615617|19615596|19615617|19615617 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" X + 19615462 19615501 3'utr Shawn FlyBase G47491.1 GTACATATGTAGATTAATGCCAAAGTTGCCAGGAAATCGG 11 19615479 0.721593854 5 9 59 0.866666667 1.113943352 0.466666667 0.363636364 0.533333333 11 2 0 13 X:19615462-19615501 6 12.5 4187 FBgn0031039 175.68 13.25333333 20.26333333 0.071152095 0.943158954 0.616877776 2 2 2 0.15 dme-miR-2535b-3p 6mer3-8 CCGTGA X 19622029 19622034 - X_19622029_19622034_- 0.878048455 0.962389967 0.920219211 0.059638447 NAA20 FBtr0332483|FBtr0332484|FBtr0074763 19621449|19621449|19621449 19622172|19622172|19622172 X - 19622011 19622047 5'utr NAA20 FlyBase G69082.1 ATAACCCATAATCCCGTGATCTGCCCGGTGATAACAT 32 19622027 0.718237669 4 32 165 1 1.579783597 0 0.125 0.263157895 32 0 0 38 X:19622011-19622047 6 NAA20 FBtr0074763|FBtr0332484|FBtr0332483 19621449|19621449|19621449 19622172|19622172|19622172 CCGTGA 6mer3-8 dme-miR-2535b-3p X - 19622012 19622047 5'utr NAA20 FlyBase G51951.1 ATAACCCATAATCCCGTGATCTGCCCGGTGATAACA 21 19622026 0.765807665 4 20 93 1 1.556302501 0 0.523809524 0.722222222 21 0 0 36 X:19622012-19622047 6 25.5 4188 FBgn0031043 449.0266667 46.18333333 70.71 0.0567895 0.552147239 0.360627917 -7 -8 -7.5 0.15 dme-miR-282-5p 6mer2-7 GAGGCT X 19624741 19624746 + X_19624741_19624746_+ 0.934060411 0.999878091 0.966969251 0.046540142 MKP-4 FBtr0332481|FBtr0074741 19624630|19624630 19625199|19625729 X + 19624662 19624768 3'utr MKP-4 FlyBase G62969.1 CATCATCAGAGACGGGACAATTGGACTCCCTTGTCGGCTGGCAAAGAACGGCAATCGCCCACCTAAACAAAAAGCAATGGAGGCTTGGATTGATTGATCAGTGCTTA 56 19624739 0.968725741 9 54 238 0.956521739 1.819543936 0.304347826 0.178571429 0.333333333 56 3 0 66 X:19624662-19624768 6 MKP-4 FBtr0074741|FBtr0332481 19624630|19624630 19625729|19625199 GAGGCT 6mer2-7 dme-miR-282-5p X + 19624722 19624778 3'utr MKP-4 FlyBase G47498.1 ACCTAAACAAAAAGCAATGGAGGCTTGGATTGATTGATCAGTGCTTATCAGTGCTGG 20 19624739 0.968289595 6 19 102 0.911764706 1.491361694 0.264705882 0.5 0.705882353 20 3 0 31 X:19624722-19624778 6 30 4189 FBgn0031044 267.6933333 13.86333333 21.32666667 0.112068536 2.163981726 1.40668959 2 2 2 0.15 dme-miR-304-5p 7mer-m8 TGAGATT X 19624917 19624923 + X_19624917_19624923_+ 0.433093695 0.610661622 0.521877659 0.125559466 MKP-4 FBtr0332481|FBtr0074741 19624630|19624630 19625199|19625729 X + 19624894 19624932 3'utr MKP-4 FlyBase G62970.1 GCTGAATAGCTCCTCCACCAAGCTGAGATTTTTGAAACG 30 19624924 0.62401992 7 27 227 0.878787879 1.161368002 0.393939394 0.1 0.181818182 30 3 1 29 X:19624894-19624932 7 MKP-4 FBtr0074741|FBtr0332481 19624630|19624630 19625729|19625199 TGAGATT 7mer-m8 dme-miR-304-5p X + 19624884 19624933 3'utr MKP-4 FlyBase G47499.1 TGGTCCCATTGCTGAATAGCTCCTCCACCAAGCTGAGATTTTTGAAACGC 18 19624923 0.987950716 6 14 130 0.846153846 1.041392685 0.269230769 0.222222222 0.461538462 18 3 1 22 X:19624884-19624933 7 23.5 4190 FBgn0031044 267.6933333 13.86333333 21.32666667 0.08778702 1.695119019 1.101906846 -7 -6 -6.5 0.15 dme-bantam-3p 6mer3-8 TGATCT X 19625328 19625333 + X_19625328_19625333_+ 0.995355647 0.960513984 0.977934815 0.024636732 MKP-4 FBtr0074741 19624630 19625729 X + 19625273 19625361 3'utr MKP-4 FlyBase G62972.1 TGTACGTGCGATATAGTGCACCCATATTTGTTGGAAGCCATACAAGTATGTATATTGATCTTTGCTGTTCCATATGCATTTGCATAGCT 19 19625327 0.992817071 9 17 194 0.84 1.322219295 0.16 0.210526316 0.4 19 4 0 21 X:19625273-19625361 6 MKP-4 FBtr0074741 19624630 19625729 TGATCT 6mer3-8 dme-bantam-3p X + 19625311 19625344 3'utr MKP-4 FlyBase G47502.1 CATACAAGTATGTATATTGATCTTTGCTGTTCCA 8 19625335 0.68337805 3 7 77 0.916666667 1.041392685 0.583333333 0.5 0.666666667 8 1 0 11 X:19625311-19625344 6 11.5 4191 FBgn0031044 267.6933333 13.86333333 21.32666667 0.042959606 0.829526328 0.53923101 1 -7 -3 0.15 dme-miR-283-5p 7mer-m1 GATATTT X 19625414 19625420 + X_19625414_19625420_+ 0.765547353 0.764762671 0.765155012 0.000554867 MKP-4 FBtr0074741 19624630 19625729 X + 19625390 19625428 3'utr MKP-4 FlyBase G62973.1 CACACAAACTATGAATGTATTTTAGATATTTAAACCTTT 9 19625411 0.83348416 5 8 89 1 1 0 0.111111111 0.2 9 0 0 10 X:19625390-19625428 7 MKP-4 FBtr0074741 19624630 19625729 GATATTT 7mer-m1 dme-miR-283-5p X + 19625389 19625418 3'utr MKP-4 FlyBase G47503.1 ACACACAAACTATGAATGTATTTTAGATAT 5 19625411 0.893212536 2 5 41 1 1 0.1 0.8 0.9 5 0 0 10 X:19625389-19625418 5 6.5 4192 FBgn0031044 267.6933333 13.86333333 21.32666667 0.024281516 0.468862707 0.304782745 3 3 3 0.15 dme-miR-970-3p 7mer-m8 TCTTATG X 19626599 19626605 - X_19626599_19626605_- 0.65886889 0.637987641 0.648428265 0.014765309 e(y)3 FBtr0334278 19626546 19628098 X - 19626560 19626617 3'utr e(y)3 FlyBase G69087.1 AAGTGGAATTATTCTTATGTATACATACTGAAAGATTTATTTTTAAGTCGAATAAAAC 20 19626606 0.849427319 6 19 185 1 1.477121255 0.033333333 0.25 0.5 20 0 0 30 X:19626560-19626617 7 e(y)3 FBtr0334278 19626546 19628098 TCTTATG 7mer-m8 dme-miR-970-3p X - 19626566 19626653 3'utr e(y)3 FlyBase G51954.1 CTTTATGCGAAAAGTAAATCTTAAGTCCTTCATATTAAGTGGAATTATTCTTATGTATACATACTGAAAGATTTATTTTTAAGTCGAA 12 19626581 0.98775482 9 11 99 0.947368421 1.255272505 0.105263158 0.416666667 0.631578947 12 1 0 18 X:19626566-19626653 7 11.5 4193 FBgn0087008 1841.593333 29.13666667 44.69333333 0.006244593 0.394691683 0.257309069 1 -24 -11.5 0.15 dme-miR-305-3p 6mer3-8 ATGTGC X 19627148 19627153 - X_19627148_19627153_- 0.999992172 0.999999613 0.999995893 5.23E-06 e(y)3 FBtr0334278 19626546 19628098 X - 19627067 19627172 3'utr e(y)3 FlyBase G69091.1 CAGCCTAAGTAGTGTCTTCATGTGCGGTAGCTGCTTGTCCTTTTTTTTTTCGATTCGTTTAGTTTAGATTCGGTAGATTCGTAAGCGGGGTAGGGACTTGGCTCGG 34 19627151 0.98567455 12 30 290 0.897435897 1.544068044 0.179487179 0.088235294 0.205128205 34 4 0 35 X:19627067-19627172 6 e(y)3 FBtr0334278 19626546 19628098 ATGTGC 6mer3-8 dme-miR-305-3p X - 19627126 19627216 3'utr e(y)3 FlyBase G51957.1 ATTTATAAGAACCACGCCCTCTAGCCCATGTAAGTAGTTAAGCACAGCCTAAGTAGTGTCTTCATGTGCGGTAGCTGCTTGTCCTTTTTTT 19 19627141 0.980642167 7 19 140 1 1.491361694 0.451612903 0.368421053 0.612903226 19 0 0 31 X:19627126-19627216 6 18 4194 FBgn0087008 1841.593333 29.13666667 44.69333333 0.009774145 0.617778286 0.40274463 -2 -12 -7 0.15 dme-miR-1006-3p 7mer-m8 CGAATTT X 19627241 19627247 - X_19627241_19627247_- 0.630686806 0.579033661 0.604860233 0.036524257 e(y)3 FBtr0334278 19626546 19628098 X - 19627238 19627306 3'utr e(y)3 FlyBase G69092.1 CGCACTGTGCATCTGTATTTTCTATAGACATTATATTTGATTTTAAACGTCTTATGCGCCGAATTTTTG 19 19627252 0.827323731 11 18 160 0.956521739 1.342422681 0.043478261 0.157894737 0.304347826 19 1 0 22 X:19627238-19627306 7 e(y)3 FBtr0334278 19626546 19628098 CGAATTT 7mer-m8 dme-miR-1006-3p X - 19627232 19627262 3'utr e(y)3 FlyBase G51958.1 AAACGTCTTATGCGCCGAATTTTTGAACATG 5 19627253 0.735662856 3 5 28 1 0.698970004 0 0 0 5 0 0 5 X:19627232-19627262 7 7 4195 FBgn0087008 1841.593333 29.13666667 44.69333333 0.003801056 0.240247111 0.156622912 5 6 5.5 0.15 dme-miR-14-3p 6mer3-8 AAGACT X 19627662 19627667 - X_19627662_19627667_- 0.984776532 0.99726357 0.991020051 0.008829713 e(y)3 FBtr0334278 19626546 19628098 X - 19627598 19627693 3'utr e(y)3 FlyBase G69094.1 AACACCAAGTAGACCACGTTATGCTTAAGACTTTTTTAACGCCTAAGTTGAATAGCCTAGCACTAAGTCACAACTTCATTTGTTTCTAGTGAATTC 28 19627660 0.98952807 10 25 244 0.852941176 1.462397998 0.235294118 0.178571429 0.323529412 28 5 0 29 X:19627598-19627693 6 e(y)3 FBtr0334278 19626546 19628098 AAGACT 6mer3-8 dme-miR-14-3p X - 19627637 19627690 3'utr e(y)3 FlyBase G51961.1 ACCAAGTAGACCACGTTATGCTTAAGACTTTTTTAACGCCTAAGTTGAATAGCC 17 19627660 0.9905921 4 15 152 0.92 1.361727836 0.04 0.352941176 0.56 17 2 0 23 X:19627637-19627690 6 20.5 4196 FBgn0087008 1841.593333 29.13666667 44.69333333 0.011131665 0.703580826 0.458681384 -7 -7 -7 0.15 dme-miR-305-3p 7mer-m1 TGTGCCG X 19641392 19641398 - X_19641392_19641398_- 0.825161943 0.824986279 0.825074111 0.000124168 CG12237 FBtr0074761 19641189 19641776 X - 19641374 19641409 3'utr CG12237 FlyBase G69125.1 ATTTATATCTGTGTGCCGGGACTTTACCTGCAAAAC 20 19641396 0.827919462 5 20 160 1 1.397940009 0.12 0.25 0.4 20 0 0 25 X:19641374-19641409 7 CG12237 FBtr0074761 19641189 19641776 TGTGCCG 7mer-m1 dme-miR-305-3p X - 19641377 19641409 3'utr CG12237 FlyBase G51983.2 ATTTATATCTGTGTGCCGGGACTTTACCTGCAA 24 19641397 0.833313328 7 22 173 0.965517241 1.447158031 0.068965517 0.208333333 0.344827586 24 1 0 28 X:19641377-19641409 7 20.5 4197 FBgn0031048 357.4333333 25.82 39.46333333 0.057353353 0.793958172 0.51946955 -2 -1 -1.5 0.15 dme-miR-7-5p 6mer3-8 GTCTTC X 19644330 19644335 + X_19644330_19644335_+ 0.967983649 0.861328507 0.914656078 0.075416544 Sec61gamma FBtr0340610 19644092 19644518 X + 19644255 19644409 3'utr Sec61gamma FlyBase G62988.1 ACGTATTGTAATGTTTCGATATTCCATTCATGAACAAGTTAGTTAATAAGATTCAAATGTAAAAAGGAATCACCCGTCTTCATAGCATTTGTTTGGGGTGCGCATCCCCGCTAATAAATGTTAAATTGATTTTCCGTGTACAAATGAGATTCTTT 28 19644334 0.977875513 13 26 180 0.9375 1.477121255 0.1875 0.107142857 0.21875 28 2 0 30 X:19644255-19644409 6 Sec61gamma FBtr0074745|FBtr0344986|FBtr0340610 19644092|19644092|19644092 19644395|19644395|19644518 GTCTTC 6mer3-8 dme-miR-7-5p X + 19644309 19644364 3'utr Sec61gamma FlyBase G47521.1 AAATGTAAAAAGGAATCACCCGTCTTCATAGCATTTGTTTGGGGTGCGCATCCCCG 10 19644335 0.968631695 5 8 53 0.909090909 1 0.181818182 0.1 0.181818182 10 1 0 10 X:19644309-19644364 6 12 4198 FBgn0031049 488 95.01 145.01 0.024590164 0.126302494 0.082752914 -4 -5 -4.5 0.15 dme-miR-965-3p 8mer-A1 TACGCTTA X 19646812 19646819 - X_19646812_19646819_- 0.623465975 0.625357514 0.624411745 0.001337492 Ranbp21 FBtr0340614|FBtr0074759 19646304|19646587 19647574|19647574 X - 19646783 19646836 3'utr Ranbp21 FlyBase G69132.1 AGGAATATTTCTGAAATTACGCTTAGGTTTAGTTGATAGGCAAAAGTTATTATT 45 19646820 0.864449139 8 37 452 0.826923077 1.031408464 0.038461538 0.133333333 0.25 45 6 3 43 X:19646783-19646836 8 Ranbp21 FBtr0074759|FBtr0340614 19646587|19646304 19647574|19647574 TACGCTTA 8mer-A1 dme-miR-965-3p X - 19646790 19646842 3'utr Ranbp21 FlyBase G51991.1 ATTTGAAGGAATATTTCTGAAATTACGCTTAGGTTTAGTTGATAGGCAAAAGT 20 19646820 0.943693021 8 17 174 0.903225806 1.447158031 0.129032258 0.4 0.612903226 20 3 0 28 X:19646790-19646842 8 29.5 4199 FBgn0031051 883.0066667 17.98 27.40666667 0.033408581 1.640711902 1.076380443 1 1 1 0.15 dme-miR-1003-3p 6mer2-7 TGTGAG X 19676230 19676235 - X_19676230_19676235_- 0.909188878 0.768544834 0.838866856 0.099450397 dome FBtr0074756 19676059 19676538 X - 19676196 19676253 3'utr dome FlyBase G69148.1 TGTATTCTTTGCGATGCGTGTGAGGCAGAAAGTATTTGTAACGCAATAGTATTTTTTT 22 19676233 0.974101478 7 21 132 1 1.477121255 0.433333333 0.181818182 0.4 22 0 0 30 X:19676196-19676253 6 dome FBtr0074756 19676059 19676538 TGTGAG 6mer2-7 dme-miR-1003-3p X - 19676209 19676246 3'utr dome FlyBase G52001.1 TTTGCGATGCGTGTGAGGCAGAAAGTATTTGTAACGCA 11 19676233 0.861398578 2 10 55 0.947368421 1.255272505 0.368421053 0.636363636 0.789473684 11 1 0 18 X:19676209-19676246 6 16 4200 FBgn0043903 649.3333333 16.12333333 24.73333333 0.024640657 0.992350631 0.64690027 -2 -2 -2 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT X 19676314 19676320 - X_19676314_19676320_- 0.656707496 0.654168256 0.655437876 0.001795486 dome FBtr0074756 19676059 19676538 X - 19676265 19676454 3'utr dome FlyBase G69149.1 CTTCAGCCGCATATCCTTCCAACGCCATGATCTGGTCACCGGATCGCCCCAGCAACCAAAATCCAGGACGAGGAACCCAGAACCCAGAACCTGTAAACTAGAATCTGGAATCTGGAAACTAGAAACCACTGTCGGGCAGCTGTTTATAGTAATTAGTGAAAACTCCTCGGACGAATGTAGTTTTACGTTT 138 19676311 0.979771602 26 126 868 0.905660377 1.857332496 0.100628931 0.123188406 0.238993711 138 14 1 144 X:19676265-19676454 7 dome FBtr0074756 19676059 19676538 GGCAGCT 7mer-m8 dme-miR-980-3p X - 19676264 19676339 3'utr dome FlyBase G52002.1 AAACTAGAAACCACTGTCGGGCAGCTGTTTATAGTAATTAGTGAAAACTCCTCGGACGAATGTAGTTTTACGTTTG 58 19676311 0.751639616 10 53 404 0.896551724 1.892094603 0.068965517 0.344827586 0.563218391 58 9 0 78 X:19676264-19676339 7 70.5 4201 FBgn0043903 649.3333333 16.12333333 24.73333333 0.108572895 4.372544966 2.850404313 -9 -9 -9 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG X 19686435 19686441 + X_19686435_19686441_+ 0.671790234 0.671786841 0.671788538 2.40E-06 Ubqn FBtr0074750|FBtr0340612 19686065|19686065 19687240|19687658 X + 19686344 19686472 3'utr Ubqn FlyBase G63041.1 AACGAGCATAGTTGCCTCGAGATCGGAGAGATACTAGATATAGGTGGGTGATATGAATGACGCCGGTGAGAATGTTAGATAGGGATCGCATACCAAAGTGTTAGCACTTTCGTAGTTGATATCAGATTT 50 19686434 0.97752748 13 48 315 0.965517241 1.748188027 0.24137931 0.12 0.24137931 50 2 0 56 X:19686344-19686472 7 Ubqn FBtr0074750|FBtr0340612 19686065|19686065 19687240|19687658 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 19686353 19686460 3'utr Ubqn FlyBase G47549.1 AGTTGCCTCGAGATCGGAGAGATACTAGATATAGGTGGGTGATATGAATGACGCCGGTGAGAATGTTAGATAGGGATCGCATACCAAAGTGTTAGCACTTTCGTAGTT 40 19686442 0.962332356 13 36 226 0.916666667 1.439332694 0.166666667 0.375 0.583333333 40 4 1 55 X:19686353-19686460 7 25 4202 FBgn0031057 2464.196667 86.81666667 133.1533333 0.010145294 0.287963141 0.187753467 1 -7 -3 0.15 dme-miR-79-3p 6mer2-7 AGCTTT X 19687401 19687406 + X_19687401_19687406_+ 0.981146355 0.999998468 0.990572412 0.013330448 Ubqn FBtr0340612 19686065 19687658 X + 19687391 19687534 3'utr Ubqn FlyBase G63047.1 ACTTTCGAAAAGCTTTCCTTCGCGCGCTCACCGTTTATATAAGATATGGATTCAGTGTATACCCTGTAAGTGCTACCACCACATAGCCTCGCTCGTCCGCTGTGGGATTGGCTGGTCGGCCGGCTGGCTGGCTGGCCGGCTGGC 27 19687406 0.981930927 16 25 179 0.928571429 1.414973348 0.214285714 0.037037037 0.071428571 27 2 0 26 X:19687391-19687534 6 Ubqn FBtr0340612 19686065 19687658 AGCTTT 6mer2-7 dme-miR-79-3p X + 19687396 19687482 3'utr Ubqn FlyBase G47552.1 CGAAAAGCTTTCCTTCGCGCGCTCACCGTTTATATAAGATATGGATTCAGTGTATACCCTGTAAGTGCTACCACCACATAGCCTCGC 16 19687407 0.981339348 9 14 94 0.80952381 1.230448921 0.285714286 0.25 0.428571429 16 4 0 17 X:19687396-19687482 6 8 4203 FBgn0031057 2464.196667 86.81666667 133.1533333 0.003246494 0.092148205 0.060081109 -5 -6 -5.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 19694392 19694398 - X_19694392_19694398_- 0.798495123 0.797429168 0.797962146 0.000753705 CG14229 FBtr0335023|FBtr0335023|FBtr0335023|FBtr0074753|FBtr0074753|FBtr0074753|FBtr0344968|FBtr0344968|FBtr0344968 19693975|19693975|19693975|19694196|19694196|19694196|19694196|19694196|19694196 19694566|19694566|19694566|19694566|19694566|19694566|19694566|19694566|19694566 X - 19694348 19694462 3'utr CG14229 FlyBase G69165.1 CGCCTCCGTTCAGTCTTCTCTGCGCACGGATTCGGATATCCGTGTCTGGAGTCACTTGCGTTTGTGTGATAAGCATTGTTTACTTGCATGGCATTAGCATCACCCCTGATGCATA 74 19694400 0.718083136 18 69 579 0.939759036 1.591064607 0.13253012 0.121621622 0.21686747 74 4 1 78 X:19694348-19694462 7 CG14229 FBtr0344968|FBtr0344968|FBtr0344968|FBtr0074753|FBtr0074753|FBtr0074753|FBtr0335023|FBtr0335023|FBtr0335023 19694196|19694196|19694196|19694196|19694196|19694196|19693975|19693975|19693975 19694566|19694566|19694566|19694566|19694566|19694566|19694566|19694566|19694566 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 19694354 19694426 3'utr CG14229 FlyBase G52014.1 TATCCGTGTCTGGAGTCACTTGCGTTTGTGTGATAAGCATTGTTTACTTGCATGGCATTAGCATCACCCCTGA 42 19694400 0.896901871 9 35 332 0.861538462 1.748188027 0.092307692 0.333333333 0.569230769 42 9 0 56 X:19694354-19694426 7 37 4204 FBgn0031059 134 20.55333333 31.35333333 0.276119403 1.800194616 1.18009781 2 2 2 0.15 dme-miR-7-5p 7mer-m8 GTCTTCC X 19699007 19699013 + X_19699007_19699013_+ 0.68954227 0.685420945 0.687481607 0.00291427 Cdc42 FBtr0309215|FBtr0074751|FBtr0309214 19698593|19698593|19698593 19699938|19699252|19699938 X + 19698958 19699065 3'utr Cdc42 FlyBase G63059.1 TTGGTCCACTGTGACCAGGCGGCTGGGCAGTTGCCCCCAACTCGGGACAGTCTTCCGCCCCACAAGCTTCAGCTCCAATCCCCGCCAGGATCCAATCGCAGCCAATCG 38 19699010 0.92036885 9 36 149 0.952380952 1.602059991 0.047619048 0.105263158 0.19047619 38 2 0 40 X:19698958-19699065 7 Cdc42 FBtr0309214|FBtr0074751|FBtr0309215 19698593|19698593|19698593 19699938|19699252|19699938 GTCTTCC 7mer-m8 dme-miR-7-5p X + 19698937 19699038 3'utr Cdc42 FlyBase G47559.1 TATTTTGGTCGGTTTCTATGTTTGGTCCACTGTGACCAGGCGGCTGGGCAGTTGCCCCCAACTCGGGACAGTCTTCCGCCCCACAAGCTTCAGCTCCAATCC 27 19699010 0.932785867 4 25 106 1 1.568201724 0.027027027 0.333333333 0.513513514 27 0 0 37 X:19698937-19699038 7 25.5 4205 FBgn0010341 5859.21 357.3733333 549.4666667 0.004352123 0.071353953 0.046408639 -3 -3 -3 0.15 dme-miR-8-3p 6mer2-7 AGTATT X 19699536 19699541 + X_19699536_19699541_+ 0.999999949 0.999999428 0.999999689 3.54E-07 Cdc42 FBtr0309215|FBtr0309214 19698593|19698593 19699938|19699938 X + 19699287 19699658 3'utr Cdc42 FlyBase G63061.1 AAAAACAATCCAGAACAGAACAGAATGTGGGGCGATTCGAAAAGAACCATGCACTTATTCGTTTTGCCTCAGTCGATGAAATCCGCGGGAATCCACGTCGATATTGTCCCGAAAGGAGCAACGTGCGAGAATTATATTAAATATTTATGATAACTGATCGCGTAATGTTTAAACAGCGGAGGTCGGATGGAATTCGCTAGCATGCAGATATGAAAGTGAAGCTTATTATGTAATAAAACTAAGCGTATGAGTATTGAAATATGATTAAAAGTAAATTAAATGAACCTAAAGGAGGAGATAAAGGATCAGCAAGAGATGCGAGAACCGAACTAGGCGTTGCAACCACAACACAAACACACATCTGAAATCTAC 81 19699534 0.965086363 37 76 399 0.951456311 1.69019608 0.213592233 0.222222222 0.388349515 81 4 1 98 X:19699287-19699658 6 Cdc42 FBtr0309214|FBtr0309215 19698593|19698593 19699938|19699938 AGTATT 6mer2-7 dme-miR-8-3p X + 19699424 19699657 3'utr Cdc42 FlyBase G47561.1 TAAATATTTATGATAACTGATCGCGTAATGTTTAAACAGCGGAGGTCGGATGGAATTCGCTAGCATGCAGATATGAAAGTGAAGCTTATTATGTAATAAAACTAAGCGTATGAGTATTGAAATATGATTAAAAGTAAATTAAATGAACCTAAAGGAGGAGATAAAGGATCAGCAAGAGATGCGAGAACCGAACTAGGCGTTGCAACCACAACACAAACACACATCTGAAATCTA 42 19699534 0.965544632 22 39 211 0.93220339 1.263241435 0.220338983 0.333333333 0.525423729 42 2 2 55 X:19699424-19699657 6 15.5 4206 FBgn0010341 5859.21 357.3733333 549.4666667 0.002645408 0.043372011 0.028209173 2 2 2 0.15 dme-miR-277-3p 7mer-m8 TGCATTT X 19699819 19699825 + X_19699819_19699825_+ 0.58225012 0.545755712 0.564002916 0.025805438 Cdc42 FBtr0309215|FBtr0309214 19698593|19698593 19699938|19699938 X + 19699784 19699841 3'utr Cdc42 FlyBase G63062.1 AAAACGACAAAAGATGAAAGGAAAATAAGAACTAATGCATTTTTTAATATTTTTATAT 25 19699809 0.968571233 6 24 147 0.931034483 1.431363764 0.068965517 0.12 0.24137931 25 2 0 27 X:19699784-19699841 7 Cdc42 FBtr0309214|FBtr0309215 19698593|19698593 19699938|19699938 TGCATTT 7mer-m8 dme-miR-277-3p X + 19699799 19699842 3'utr Cdc42 FlyBase G47562.1 GAAAGGAAAATAAGAACTAATGCATTTTTTAATATTTTTATATG 16 19699809 0.954251777 6 15 81 1 1.380211242 0.166666667 0.4375 0.625 16 0 0 24 X:19699799-19699842 7 18.5 4207 FBgn0010341 5859.21 357.3733333 549.4666667 0.003157422 0.051766593 0.033669012 10 10 10 0.15 dme-miR-2b-2-5p 7mer-m8 TTGAAGA X 19734300 19734306 + X_19734300_19734306_+ 0.629201742 0.60980416 0.619502951 0.013716104 AP-1-2beta FBtr0074789 19734229 19734581 X + 19734229 19734315 stop_codon AP-1-2beta FlyBase G63090.1 AAGCGTTCCATGGCGCACATCCGATGGCATAGGATAAGCACAAAGCAATTGGAGCTATCGATTTGCGTGTGTTGAAGATTAGCTCAA 26 19734307 0.939278263 7 26 158 1 1.531478917 0.058823529 0.269230769 0.441176471 26 0 0 34 X:19734229-19734315 7 AP-1-2beta FBtr0074789 19734229 19734581 TTGAAGA 7mer-m8 dme-miR-2b-2-5p X + 19734287 19734319 3'utr AP-1-2beta FlyBase G47580.1 CGATTTGCGTGTGTTGAAGATTAGCTCAACAAT 11 19734307 0.819959957 2 11 82 1 1.204119983 0.0625 0.363636364 0.5625 11 0 0 16 X:19734287-19734319 7 12 4208 FBgn0010380 943.23 35.09 53.51 0.012722242 0.341977771 0.224257148 -7 -7 -7 0.15 dme-miR-317-3p 6mer3-8 TGTGTT X 19740770 19740775 - X_19740770_19740775_- 0.996108842 0.817007333 0.906558087 0.126643885 CoVIb FBtr0074815|FBtr0074817|FBtr0308683|FBtr0074816 19740535|19740684|19740535|19740535 19740906|19740906|19740906|19740906 X - 19740754 19740802 3'utr CoVIb FlyBase G69183.1 ATCCGGCAATTGCAACAGAGACTAGTTTGTGTTTGTGCTTTCCCCAGCG 7 19740776 0.970837976 4 7 46 1 1.079181246 0 0.285714286 0.583333333 7 0 0 12 X:19740754-19740802 6 CoVIb FBtr0074816|FBtr0308683|FBtr0074817|FBtr0074815 19740535|19740535|19740684|19740535 19740906|19740906|19740906|19740906 TGTGTT 6mer3-8 dme-miR-317-3p X - 19740774 19740812 3'utr CoVIb FlyBase G52032.1 GGTAACCAGAATCCGGCAATTGCAACAGAGACTAGTTTG 5 19740777 0.960901011 2 4 22 0.8 0.602059991 0.4 0 0 5 1 0 4 X:19740774-19740812 1 4.5 4209 FBgn0031066 3558.956667 798.5366667 1223.406667 0.001264416 0.005635308 0.003678254 1 2 1.5 0.15 dme-miR-308-3p 7mer-m1 TGTGATT X 19741426 19741432 - X_19741426_19741432_- 0.521217878 0.521223162 0.52122052 3.75E-06 CG18809 FBtr0331746|FBtr0331747|FBtr0074811|FBtr0074810 19741222|19741222|19741222|19741222 19741779|19741779|19741779|19741779 X - 19741401 19741454 3'utr CG18809 FlyBase G69186.1 CGCAAACTGAAGAACTAACCATTGTGATTTATATATCTATCTCTTCCTTCCCGT 14 19741433 0.983668026 5 14 110 1 1.255272505 0 0.285714286 0.444444444 14 0 0 18 X:19741401-19741454 7 CG18809 FBtr0074810|FBtr0074811|FBtr0331747|FBtr0331746 19741222|19741222|19741222|19741222 19741779|19741779|19741779|19741779 TGTGATT 7mer-m1 dme-miR-308-3p X - 19741399 19741450 3'utr CG18809 FlyBase G52035.1 AACTGAAGAACTAACCATTGTGATTTATATATCTATCTCTTCCTTCCCGTTT 7 19741433 0.989581504 3 7 68 1 0.954242509 0.222222222 0.142857143 0.333333333 7 0 0 9 X:19741399-19741450 7 10 4210 FBgn0042132 250.6633333 14.18333333 21.89333333 0.039894148 0.705052879 0.456760049 1 1 1 0.15 dme-miR-304-5p 6mer2-7 GAGATT X 19745155 19745160 + X_19745155_19745160_+ 0.891241672 0.88577293 0.888507301 0.003867026 Rpp20 FBtr0091935|FBtr0346040 19745104|19745104 19745747|19745898 X + 19745116 19745188 3'utr Rpp20 FlyBase G63094.1 CTCTCGGAGCTGGTGCGCTGGCTGGGGCTCACCGAGTTCGAGATTCTGGTCAATCTGTGCGGCCTGCTGGTGT 48 19745159 0.790044023 6 48 327 1 1.755874856 0.210526316 0.1875 0.315789474 48 0 0 57 X:19745116-19745188 6 Rpp20 FBtr0346040|FBtr0091935 19745104|19745104 19745898|19745747 GAGATT 6mer2-7 dme-miR-304-5p X + 19745114 19745177 3'utr Rpp20 FlyBase G47584.1 AACTCTCGGAGCTGGTGCGCTGGCTGGGGCTCACCGAGTTCGAGATTCTGGTCAATCTGTGCGG 30 19745159 0.787954229 5 30 200 1 1.612783857 0.268292683 0.3 0.487804878 30 0 0 41 X:19745114-19745177 6 35.5 4211 FBgn0066304 95 9.253333333 14.03666667 0.373684211 3.836455331 2.529090477 -4 -4 -4 0.15 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG X 19745346 19745352 + X_19745346_19745352_+ 0.701812944 0.698258622 0.700035783 0.00251327 Rpp20 FBtr0091935|FBtr0346040 19745104|19745104 19745747|19745898 X + 19745222 19745365 3'utr Rpp20 FlyBase G63095.1 AGGCCAGGGCCGGACCCGGTGGCATACTCCCGGAGCCCATGGGCGACTGGTTCACCGTCTTCAGCCCCCTGTTCTTCATCGACATCTGCAACGCGTACTTTTGCGTCATTGTGGGCATCCGCATGTACCTGGACTCTAACAACA 71 19745345 0.972000771 10 71 410 1 1.939519253 0.091954023 0.183098592 0.333333333 71 0 0 87 X:19745222-19745365 7 Rpp20 FBtr0346040|FBtr0091935 19745104|19745104 19745898|19745747 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" X + 19745321 19745368 3'utr Rpp20 FlyBase G47585.2 TTTGCGTCATTGTGGGCATCCGCATGTACCTGGACTCTAACAACAAGC 49 19745345 0.830790965 4 49 277 1 1.86923172 0 0.367346939 0.581081081 49 0 0 74 X:19745321-19745368 7 55.5 4212 FBgn0066304 95 9.253333333 14.03666667 0.584210526 5.997838617 3.953930183 1 1 1 0.15 dme-miR-308-3p 7mer-m1 TGTGATT X 19758906 19758912 + X_19758906_19758912_+ 0.521223272 0.521222214 0.521222743 7.78E-07 Pmp70 FBtr0335155|FBtr0074795|FBtr0335157|FBtr0335156 19758756|19758756|19758756|19758756 19759280|19759280|19759280|19759280 X + 19758879 19758925 3'utr Pmp70 FlyBase G63114.1 AAGTTGGAAATGCTTCCTTGTTTCGATTGTGATTGTTTCTTTTGTAC 47 19758905 0.687773863 6 45 588 0.960784314 1.389166084 0.098039216 0.085106383 0.156862745 47 1 1 49 X:19758879-19758925 7 Pmp70 FBtr0335156|FBtr0335157|FBtr0074795|FBtr0335155 19758756|19758756|19758756|19758756 19759280|19759280|19759280|19759280 TGTGATT 7mer-m1 dme-miR-308-3p X + 19758875 19758919 3'utr Pmp70 FlyBase G47596.1 TTGCAAGTTGGAAATGCTTCCTTGTTTCGATTGTGATTGTTTCTT 39 19758912 0.876690919 8 36 468 0.925925926 1.096910013 0 0.307692308 0.5 39 1 3 50 X:19758875-19758919 7 42 4213 FBgn0031069 864.5033333 34.21666667 52.20333333 0.048582809 1.227471992 0.804546325 1 -6 -2.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG X 19759091 19759096 + X_19759091_19759096_+ 0.989807909 0.987464023 0.988635966 0.001657388 Pmp70 FBtr0335155|FBtr0074795|FBtr0335157|FBtr0335156 19758756|19758756|19758756|19758756 19759280|19759280|19759280|19759280 X + 19759021 19759173 3'utr Pmp70 FlyBase G63115.1 AAAGTAGTCGGCGCACAGCCACAAGCGATGGATGAGCGTTTAGAAAAGCTTTTAGTGAATAACACACCCATACCTGTAGTAGACCTGCATACCGCACAAGTCCCAAATCGCGCATAGAGAACTTATAGTAATTTGTAAAATACGCTTGGCTTA 35 19759096 0.975478859 15 33 208 0.951219512 1.591064607 0.12195122 0.142857143 0.268292683 35 2 0 39 X:19759021-19759173 6 Pmp70 FBtr0335156|FBtr0335157|FBtr0074795|FBtr0335155 19758756|19758756|19758756|19758756 19759280|19759280|19759280|19759280 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" X + 19759037 19759111 3'utr Pmp70 FlyBase G47598.1 AGCCACAAGCGATGGATGAGCGTTTAGAAAAGCTTTTAGTGAATAACACACCCATACCTGTAGTAGACCTGCATA 9 19759097 0.9629874 5 7 42 0.9375 1.176091259 0.0625 0.444444444 0.6875 9 1 0 15 X:19759037-19759111 6 10 4214 FBgn0031069 864.5033333 34.21666667 52.20333333 0.011567335 0.292255236 0.191558649 -5 -6 -5.5 0.15 dme-miR-79-3p 6mer3-8 TAGCTT X 19759339 19759344 - X_19759339_19759344_- 0.992937758 0.999990098 0.996463928 0.004986729 CG12702 FBtr0074809|FBtr0335137|FBtr0346378 19759171|19759171|19759171 19759370|19759370|19759370 X - 19759296 19759348 3'utr CG12702 FlyBase G69188.1 AATATAGCTTAGACTAGTAGCATCTATCGATGAACTCCACTCCGCCGGCATCA 17 19759340 0.892375292 4 15 111 0.842105263 1.204119983 0.052631579 0.117647059 0.210526316 17 3 0 16 X:19759296-19759348 6 CG12702 FBtr0346378|FBtr0335137|FBtr0074809 19759171|19759171|19759171 19759370|19759370|19759370 TAGCTT 6mer3-8 dme-miR-79-3p X - 19759297 19759350 3'utr CG12702 FlyBase G52036.1 TTAATATAGCTTAGACTAGTAGCATCTATCGATGAACTCCACTCCGCCGGCATC 6 19759340 0.980243268 3 6 45 1 0.903089987 0 0.333333333 0.5 6 0 0 8 X:19759297-19759350 6 7.5 4215 FBgn0031070 235.6866667 9.673333333 14.61 0.03182191 0.77532736 0.513347023 -4 -4 -4 0.15 dme-miR-263a-5p 7mer-A1 TGCCATA X 19776530 19776536 - X_19776530_19776536_- 0.750912749 0.78290055 0.766906649 0.02261879 vfl FBtr0344733|FBtr0074808|FBtr0345014|FBtr0074807 19775985|19775985|19775985|19775985 19776884|19777495|19777495|19777495 X - 19776471 19776539 5'utr vfl FlyBase G69199.1 GAATGCCATATACACGATATGTAAACTAAAAATCAGCAACTATATGCCAATTGATATATATATATATAC 7 19776529 0.972721016 5 6 38 0.9 0.954242509 0.1 0.285714286 0.5 7 1 0 9 X:19776471-19776539 7 vfl FBtr0345014|FBtr0074807|FBtr0344733|FBtr0074808 19775985|19775985|19775985|19775985 19777495|19777495|19776884|19777495 TGCCATA 7mer-A1 dme-miR-263a-5p X - 19776473 19776549 5'utr vfl FlyBase G52044.1 AACAACACACGAATGCCATATACACGATATGTAAACTAAAAATCAGCAACTATATGCCAATTGATATATATATATAT 6 19776531 0.890362711 6 6 26 1 0.77815125 0.333333333 0 0 6 0 0 6 X:19776473-19776549 7 3 4216 FBgn0259789 8.736666667 0.15 0.24 0.343380389 20 12.5 -7 -5 -6 0.15 dme-miR-8-3p 6mer2-7 AGTATT X 19832499 19832504 - X_19832499_19832504_- 0.999990405 1 0.999995203 6.79E-06 pico FBtr0074804|FBtr0303995|FBtr0074805|FBtr0303996 19831605|19831605|19830213|19831605 19833338|19833338|19833338|19833338 X - 19832410 19832526 3'utr pico FlyBase G69207.1 TTTTAATTGTTTAGTTGCTCGTAGTATTGATTTTATACATTATATCTTTTTTTTGCGATTATCTTTGTAACGGTAGAGTGAACGTTTTGTGAGCGCATGAAATGCGCTGCGCTAGCA 31 19832495 0.993480905 11 30 371 0.972972973 1.556302501 0.189189189 0.161290323 0.297297297 31 1 0 36 X:19832410-19832526 6 pico FBtr0074804|FBtr0303995|FBtr0074805|FBtr0303996 19831605|19831605|19830213|19831605 19833338|19833338|19833338|19833338 AGTATT 6mer2-7 dme-miR-8-3p X - 19832481 19832525 3'utr pico FlyBase G52052.1 TTTAATTGTTTAGTTGCTCGTAGTATTGATTTTATACATTATATC 13 19832495 0.871755906 8 11 153 0.772727273 1.230448921 0 0.538461538 0.727272727 13 5 0 17 X:19832481-19832525 6 18.5 4217 FBgn0261811 2157.516667 40.99333333 63.13 0.008574673 0.451292893 0.293046095 -9 -9 -9 0.15 dme-miR-277-3p 7mer-m8 TGCATTT X 19832607 19832613 - X_19832607_19832613_- 0.617499888 0.616965256 0.617232572 0.000378019 pico FBtr0074804|FBtr0303995|FBtr0074805|FBtr0303996 19831605|19831605|19830213|19831605 19833338|19833338|19833338|19833338 X - 19832592 19832637 3'utr pico FlyBase G69208.1 ATTTTAGTTTGTAAAAAGGAAAAATGCATTTTAGAAACGATAGTGC 19 19832610 0.85823377 6 18 151 0.956521739 1.342422681 0.086956522 0.210526316 0.347826087 19 1 0 22 X:19832592-19832637 7 pico FBtr0074804|FBtr0303995|FBtr0074805|FBtr0303996 19831605|19831605|19830213|19831605 19833338|19833338|19833338|19833338 TGCATTT 7mer-m8 dme-miR-277-3p X - 19832584 19832637 3'utr pico FlyBase G52053.1 ATTTTAGTTTGTAAAAAGGAAAAATGCATTTTAGAAACGATAGTGCATTATTTA 13 19832611 0.978217934 5 12 94 0.941176471 1.204119983 0 0.230769231 0.411764706 13 1 0 16 X:19832584-19832637 7 14.5 4218 FBgn0261811 2157.516667 40.99333333 63.13 0.00672069 0.353716051 0.229684777 -3 -2 -2.5 0.15 dme-miR-8-3p 7mer-m8 CAGTATT X 19905160 19905166 + X_19905160_19905166_+ 0.661607464 0.661614037 0.66161075 4.60E-06 Hers FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800|FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19906687|19906687|19906687|19906687|19908108|19908108|19906687|19906687 X + 19905142 19905178 3'utr Hers FlyBase G63193.1 ATTGTTTTGATCAGTCTACAGTATTGTTAAAGATATT 19 19905158 0.612760804 6 17 186 0.9 1.255272505 0 0.052631579 0.1 19 2 0 18 X:19905142-19905178 7 Hers FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523|FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19908108|19908108|19906687|19906687|19906687|19906687|19906687|19906687 CAGTATT 7mer-m8 dme-miR-8-3p X + 19905127 19905180 3'utr Hers FlyBase G47652.1 TAGAGAGAAAGTTACATTGTTTTGATCAGTCTACAGTATTGTTAAAGATATTTT 19 19905157 0.989674669 8 18 176 0.961538462 1.397940009 0.192307692 0.263157895 0.461538462 19 1 0 25 X:19905127-19905180 7 18 4219 FBgn0052529 4274.003333 62.55666667 96.43 0.004211508 0.287739117 0.186663901 2 3 2.5 0.15 dme-miR-932-5p 7mer-m8 GGAATTG X 19905694 19905700 + X_19905694_19905700_+ 0.702966164 0.70297287 0.702969517 4.74E-06 Hers FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800|FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19906687|19906687|19906687|19906687|19908108|19908108|19906687|19906687 X + 19905608 19905705 3'utr Hers FlyBase G63197.1 AAGTTGTATGTATTTATTATCATTAATATCGAGTAAGTCAGCATTCTGTGTACAGTTTTCCGCTCGCTTTTGCTCTAATCGCTCAAGGAATTGGTTTA 22 19905678 0.777246745 14 20 205 0.916666667 1.041392685 0.208333333 0.090909091 0.166666667 22 1 1 22 X:19905608-19905705 7 Hers FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523|FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19908108|19908108|19906687|19906687|19906687|19906687|19906687|19906687 GGAATTG 7mer-m8 dme-miR-932-5p X + 19905638 19905711 3'utr Hers FlyBase G47656.1 GAGTAAGTCAGCATTCTGTGTACAGTTTTCCGCTCGCTTTTGCTCTAATCGCTCAAGGAATTGGTTTAACCACC 12 19905665 0.985472996 9 11 95 0.947368421 1.255272505 0.263157895 0.5 0.684210526 12 1 0 18 X:19905638-19905711 7 3.5 4220 FBgn0052529 4274.003333 62.55666667 96.43 0.000818904 0.055949273 0.036295759 16 29 22.5 0.15 dme-miR-34-5p 6mer3-8 CACTGC X 19905853 19905858 + X_19905853_19905858_+ 0.972751787 0.96790338 0.970327583 0.003428337 Hers FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800|FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19906687|19906687|19906687|19906687|19908108|19908108|19906687|19906687 X + 19905731 19905870 3'utr Hers FlyBase G63198.1 TAGCTAAGACCCTTTCGATGGCCAAAAAGTTATTTGGTGTGCCACAGAAATCTCTGCAAATCGACTTGATGCGATTTTAATTGTCTTTTCCTCAAAACTAAATCCATTTGCTCTGTAGAGATCACTGCGGCTCTCCGAAT 19 19905841 0.983077156 11 18 147 0.952380952 1.301029996 0.19047619 0.105263158 0.19047619 19 1 0 20 X:19905731-19905870 6 Hers FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523|FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19908108|19908108|19906687|19906687|19906687|19906687|19906687|19906687 CACTGC 6mer3-8 dme-miR-34-5p X + 19905829 19905867 3'utr Hers FlyBase G47657.1 TAAATCCATTTGCTCTGTAGAGATCACTGCGGCTCTCCG 6 19905841 0.669549923 4 5 42 1 0.954242509 0.333333333 0.333333333 0.555555556 6 0 0 9 X:19905829-19905867 6 4.5 4221 FBgn0052529 4274.003333 62.55666667 96.43 0.001052877 0.071934779 0.046665975 12 12 12 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC X 19906402 19906408 + X_19906402_19906408_+ 0.661433109 0.661598926 0.661516018 0.000117238 Hers FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800|FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19906687|19906687|19906687|19906687|19908108|19908108|19906687|19906687 X + 19906234 19906460 3'utr Hers FlyBase G63201.1 TCTAACTATAATTTCTGACATATTTGAGATTTCTGGCTCCAGAGGCGGAAAACTGGATGGCTTGACATCGATCCTTGCTAGGCGCTGTTGGTATATATTTTTATTTGTTGTTAGTTTTTGTAAGCGATTGAACACACATTTTGTACTCTTGATTTGACATTTATCTTTTGTGTTCGCCTTAGTTTGGAAATTTGATTTCAGAGACATGATTTTCTTTCGGTTAACTA 99 19906401 0.965066754 35 93 938 0.947826087 2.037426498 0.252173913 0.141414141 0.260869565 99 6 0 109 X:19906234-19906460 7 Hers FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523|FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19908108|19908108|19906687|19906687|19906687|19906687|19906687|19906687 TGTGTTC 7mer-m8 dme-miR-317-3p X + 19906244 19906445 3'utr Hers FlyBase G47659.1 ATTTCTGACATATTTGAGATTTCTGGCTCCAGAGGCGGAAAACTGGATGGCTTGACATCGATCCTTGCTAGGCGCTGTTGGTATATATTTTTATTTGTTGTTAGTTTTTGTAAGCGATTGAACACACATTTTGTACTCTTGATTTGACATTTATCTTTTGTGTTCGCCTTAGTTTGGAAATTTGATTTCAGAGACATGATTT 41 19906401 0.989288363 20 40 390 0.984375 1.799340549 0.171875 0.43902439 0.640625 41 1 0 63 X:19906244-19906445 7 14 4222 FBgn0052529 4274.003333 62.55666667 96.43 0.003275617 0.223797091 0.145183034 1 1 1 0.15 dme-miR-995-5p 7mer-A1 ATTCGGA X 20157242 20157248 - X_20157242_20157248_- 0.782025519 0.782911824 0.782468671 0.000626709 Rab35 FBtr0070028|FBtr0333549|FBtr0333548|FBtr0303258 20156477|20155764|20157143|20157088 20157582|20157582|20157582|20157582 X - 20157214 20157254 3'utr Rab35 FlyBase G69239.1 AGTTTTATTCGGAATAATGCCAGATAGCCGTAAATTAAAGT 13 20157237 0.808350991 3 12 73 0.941176471 1.204119983 0 0.230769231 0.411764706 13 1 0 16 X:20157214-20157254 7 Rab35 FBtr0303258|FBtr0333548|FBtr0333549|FBtr0070028 20157088|20157143|20155764|20156477 20157582|20157582|20157582|20157582 ATTCGGA 7mer-A1 dme-miR-995-5p X - 20157224 20157264 3'utr Rab35 FlyBase G52073.1 TTTCCTCCTCAGTTTTATTCGGAATAATGCCAGATAGCCGT 5 20157237 0.980659776 3 5 42 1 0.903089987 0 0.4 0.625 5 0 0 8 X:20157224-20157264 7 8.5 4223 FBgn0031090 1038.15 62.16666667 96 0.008187641 0.136729223 0.088541667 -11 -11 -11 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA X 20168120 20168126 - X_20168120_20168126_- 0.823349332 0.823349278 0.823349305 0 CG9581 FBtr0070026 20168040 20168150 X - 20168093 20168150 3'utr CG9581 FlyBase G69253.1 GAGCTCACAACGAAAACCAAATTCCTAGTCATAAGCCTTTCATTCTCCCGACAACCTT 29 20168129 0.96095212 4 28 138 0.945945946 1.544068044 0.216216216 0.275862069 0.432432432 29 2 0 35 X:20168093-20168150 7 CG9581 FBtr0070026 20168040 20168150 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X - 20168043 20168144 3'utr CG9581 FlyBase G52079.1 ACAACGAAAACCAAATTCCTAGTCATAAGCCTTTCATTCTCCCGACAACCTTATGAGCTGATTTGGGTCCTAAAGTAAAGGCAGATGCTGTATTTATAAATG 20 20168128 0.975116322 6 18 113 0.884615385 1.361727836 0.153846154 0.25 0.423076923 20 3 0 23 X:20168043-20168144 7 21.5 4224 FBgn0031093 169.6733333 10.98333333 16.82 0.126714078 1.957511381 1.27824019 3 2 2.5 0.15 dme-miR-305-3p 6mer2-7 TGTGCC X 20171524 20171529 - X_20171524_20171529_- 0.994934603 0.999999998 0.9974673 0.003581779 AnxB10 FBtr0070025|FBtr0301931 20171443|20171443 20171591|20171591 X - 20171468 20171552 3'utr AnxB10 FlyBase G69260.1 CGTGTTAATAGCTTTGATCGTAGTGTGCCTTTTAGGAAAATCGCTTTTAATGTCGTCTGCGCATGCGCACACTGTTGGCAATAAA 32 20171521 0.89442581 12 30 259 0.951219512 1.591064607 0.219512195 0.1875 0.365853659 32 2 0 39 X:20171468-20171552 6 AnxB10 FBtr0070025|FBtr0301931 20171443|20171443 20171591|20171591 TGTGCC 6mer2-7 dme-miR-305-3p X - 20171474 20171539 3'utr AnxB10 FlyBase G52084.1 TTGATCGTAGTGTGCCTTTTAGGAAAATCGCTTTTAATGTCGTCTGCGCATGCGCACACTGTTGGC 19 20171521 0.981546168 10 17 125 0.925925926 1.397940009 0.296296296 0.421052632 0.592592593 19 2 0 25 X:20171474-20171539 6 17 4225 FBgn0000084 609.39 60.31 92.3 0.027896749 0.281876969 0.184182015 -8 -8 -8 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 20182235 20182240 - X_20182235_20182240_- 0.999815413 0.999384341 0.999599877 0.000304834 Sdic2 FBtr0345925|FBtr0345925|FBtr0345925|FBtr0089610|FBtr0089610|FBtr0089610|FBtr0345926|FBtr0345926|FBtr0345926 20181741|20181741|20181741|20182036|20182036|20182036|20181588|20181588|20181588 20182337|20182337|20182337|20182337|20182337|20182337|20182337|20182337|20182337 X - 20182216 20182249 3'utr Sdic2 FlyBase G69266.1 TGTATCTTTTGTGATCCCGCTACTGTGTATAGCC 11 20182241 0.879786836 4 11 103 1 1.146128036 0.142857143 0.181818182 0.357142857 11 0 0 14 X:20182216-20182249 6 Sdic2 FBtr0345926|FBtr0345926|FBtr0345926|FBtr0089610|FBtr0089610|FBtr0089610|FBtr0345925|FBtr0345925|FBtr0345925 20181588|20181588|20181588|20182036|20182036|20182036|20181741|20181741|20181741 20182337|20182337|20182337|20182337|20182337|20182337|20182337|20182337|20182337 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 20182224 20182250 3'utr Sdic2 FlyBase G52087.1 TTGTATCTTTTGTGATCCCGCTACTGT 6 20182242 0.677388768 2 6 60 1 1.041392685 0.181818182 0.833333333 0.909090909 6 0 0 11 X:20182224-20182250 6 8.5 4226 FBgn0053497 6.756666667 0.41 0.633333333 1.258016774 20.73170732 13.42105263 1 2 1.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 20228616 20228621 - X_20228616_20228621_- 0.999716236 0.999655434 0.999685835 4.30E-05 sw FBtr0089402|FBtr0089402|FBtr0089402|FBtr0340361|FBtr0340361|FBtr0340361|FBtr0089397|FBtr0089397|FBtr0089397|FBtr0089409|FBtr0089409|FBtr0089409|FBtr0089399|FBtr0089399|FBtr0089399|FBtr0089403|FBtr0089403|FBtr0089403|FBtr0089407|FBtr0089407|FBtr0089407|FBtr0089408|FBtr0089408|FBtr0089408|FBtr0089398|FBtr0089398|FBtr0089398|FBtr0089401|FBtr0089401|FBtr0089401|FBtr0089400|FBtr0089400|FBtr0089400|FBtr0089404|FBtr0089404|FBtr0089404|FBtr0089406|FBtr0089406|FBtr0089406|FBtr0340360|FBtr0340360|FBtr0340360|FBtr0089405|FBtr0089405|FBtr0089405 20227959|20227959|20227959|20227959|20227959|20227959|20228122|20228122|20228122|20228122|20228122|20228122|20227959|20227959|20227959|20227959|20227959|20227959|20228122|20228122|20228122|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20228122|20228122|20228122|20228122|20228122|20228122|20227959|20227959|20227959|20228122|20228122|20228122 20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718 X - 20228606 20228632 3'utr sw FlyBase G69279.1 TTTGTATCTTTTGTGATCCCGCTACTG 7 20228622 0.655741663 2 6 62 0.875 0.84509804 0.375 0.142857143 0.25 7 1 0 7 X:20228606-20228632 6 sw FBtr0089403|FBtr0089403|FBtr0089403|FBtr0089404|FBtr0089404|FBtr0089404|FBtr0089407|FBtr0089407|FBtr0089407|FBtr0340360|FBtr0340360|FBtr0340360|FBtr0089402|FBtr0089402|FBtr0089402|FBtr0340361|FBtr0340361|FBtr0340361|FBtr0089408|FBtr0089408|FBtr0089408|FBtr0089409|FBtr0089409|FBtr0089409|FBtr0089399|FBtr0089399|FBtr0089399|FBtr0089401|FBtr0089401|FBtr0089401|FBtr0089406|FBtr0089406|FBtr0089406|FBtr0089405|FBtr0089405|FBtr0089405|FBtr0089398|FBtr0089398|FBtr0089398|FBtr0089400|FBtr0089400|FBtr0089400|FBtr0089397|FBtr0089397|FBtr0089397 20227959|20227959|20227959|20228122|20228122|20228122|20228122|20228122|20228122|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20228122|20228122|20228122|20227959|20227959|20227959|20227959|20227959|20227959|20228122|20228122|20228122|20228122|20228122|20228122|20227959|20227959|20227959|20227959|20227959|20227959|20228122|20228122|20228122 20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 20228608 20228632 3'utr sw FlyBase G52093.1 TTTGTATCTTTTGTGATCCCGCTAC 7 20228622 0.694488948 2 6 61 0.9 0.954242509 0.2 0.285714286 0.5 7 1 0 9 X:20228608-20228632 6 7 4227 FBgn0003654 899.0166667 37.47 57.48333333 0.007786285 0.18681612 0.121774427 1 1 1 0.15 dme-miR-33-5p 6mer2-7 AATGCA X 2023105 2023110 + X_2023105_2023110_+ 0.756196474 0.914563288 0.835379881 0.111982238 east FBtr0307290 2022463 2024647 X + 2023082 2023135 3'utr east FlyBase G58174.1 ACACACAAAGTAATTTAAGAGAGAATGCAGCACAAAAAAATTGAGGCCAAGATT 17 2023107 0.933858758 3 16 38 0.947368421 1.255272505 0.052631579 0.117647059 0.210526316 17 1 0 18 X:2023082-2023135 6 east FBtr0307290 2022463 2024647 AATGCA 6mer2-7 dme-miR-33-5p X + 2023086 2023122 3'utr east FlyBase G44003.1 ACAAAGTAATTTAAGAGAGAATGCAGCACAAAAAAAT 9 2023107 0.894543098 3 9 25 1 1.204119983 0 0.555555556 0.75 9 0 0 16 X:2023086-2023122 6 13 4228 FBgn0261954 4706.666667 61.14 94.46 0.00276204 0.212626758 0.137624391 -2 -2 -2 0.15 dme-miR-14-3p 6mer3-8 AAGACT X 20248355 20248360 - X_20248355_20248360_- 0.999973682 0.999995897 0.999984789 1.57E-05 CG17068 FBtr0077341 20248307 20248868 X - 20248345 20248371 3'utr CG17068 FlyBase G69281.1 AAGATTTACACAAGACTAAATTGGTAT 13 20248366 0.585355024 4 13 69 1 1.230448921 0.058823529 0.307692308 0.470588235 13 0 0 17 X:20248345-20248371 6 CG17068 FBtr0077341 20248307 20248868 AAGACT 6mer3-8 dme-miR-14-3p X - 20248341 20248376 3'utr CG17068 FlyBase G52095.1 ATTTTAAGATTTACACAAGACTAAATTGGTATATTT 9 20248367 0.766538447 3 8 54 0.916666667 1.041392685 0.083333333 0.222222222 0.416666667 9 1 0 11 X:20248341-20248376 6 11 4229 FBgn0031098 134.3766667 5.846666667 8.906666667 0.08185945 1.881413911 1.23502994 6 7 6.5 0.15 dme-miR-184-3p 6mer3-8 TCCGTC X 2025349 2025354 - X_2025349_2025354_- 0.998493571 0.998479354 0.998486463 1.00E-05 Actn FBtr0070343|FBtr0310659|FBtr0310657|FBtr0070345|FBtr0070344|FBtr0310658|FBtr0333802|FBtr0333801|FBtr0303048 2025114|2025114|2024754|2023820|2025114|2025114|2025114|2025114|2025114 2025540|2025540|2025540|2025540|2025540|2025540|2025540|2025540|2025540 X - 2025316 2025364 3'utr Actn FlyBase G64175.1 TTTATTAATTTCCGTCTCGAGCCGATGTATGCGACCCACACATACAAAA 9 2025355 0.98348232 3 9 72 1 0.954242509 0 0 0 9 0 0 9 X:2025316-2025364 6 Actn FBtr0310658|FBtr0333802|FBtr0333801|FBtr0303048|FBtr0070343|FBtr0310657|FBtr0310659|FBtr0070345|FBtr0070344 2025114|2025114|2025114|2025114|2025114|2024754|2025114|2023820|2025114 2025540|2025540|2025540|2025540|2025540|2025540|2025540|2025540|2025540 TCCGTC 6mer3-8 dme-miR-184-3p X - 2025336 2025363 3'utr Actn FlyBase G48376.1 TTATTAATTTCCGTCTCGAGCCGATGTA 9 2025355 0.706860117 2 9 67 1 1.113943352 0 0.222222222 0.461538462 9 0 0 13 X:2025336-2025363 6 9 4230 FBgn0000667 602.5766667 20.25333333 31.07 0.014935859 0.444371297 0.289668491 1 1 1 0.15 dme-bantam-3p 6mer3-8 TGATCT X 2039002 2039007 - X_2039002_2039007_- 0.997757384 0.997962467 0.997859925 0.000145028 usp FBtr0070346|FBtr0333803 2038796|2038796 2039386|2039386 X - 2038981 2039033 5'utr usp FlyBase G64186.1 TAACGGTTAAAATTAATGCATAGTTATGATCTACAGACGTATGTAAACATACA 85 2039007 0.722550715 5 80 571 0.923809524 1.986771734 0.19047619 0.188235294 0.342857143 85 8 0 97 X:2038981-2039033 6 usp FBtr0070346|FBtr0333803 2038796|2038796 2039386|2039386 TGATCT 6mer3-8 dme-bantam-3p X - 2038982 2039029 5'utr usp FlyBase G48383.1 GGTTAAAATTAATGCATAGTTATGATCTACAGACGTATGTAAACATAC 44 2039007 0.707469333 4 42 273 0.971428571 1.832508913 0.357142857 0.340909091 0.585714286 44 2 0 68 X:2038982-2039029 6 63.5 4231 FBgn0003964 1386.533333 66.48333333 101.85 0.045797673 0.955126598 0.623465881 0 0 0 0.15 dme-miR-308-3p 7mer-m1 TGTGATT X 2039331 2039337 - X_2039331_2039337_- 0.518336203 0.500014294 0.509175248 0.01295554 usp FBtr0070346|FBtr0333803 2038796|2038796 2039386|2039386 X - 2039291 2039360 5'utr usp FlyBase G64188.1 TCTCCATCCGAAAAATGTTTCATTGTGATTGCGTTTGTTTGCATTTCTCCTCTCTATCCCTTATACCCTA 295 2039338 0.629756868 17 277 3251 0.938172043 1.542825427 0.206989247 0.210169492 0.373655914 295 14 9 349 X:2039291-2039360 7 usp FBtr0070346|FBtr0333803 2038796|2038796 2039386|2039386 TGTGATT 7mer-m1 dme-miR-308-3p X - 2039295 2039356 5'utr usp FlyBase G48385.1 CATCCGAAAAATGTTTCATTGTGATTGCGTTTGTTTGCATTTCTCCTCTCTATCCCTTATAC 199 2039332 0.691215852 11 191 2120 0.969798658 1.682746592 0.241610738 0.346733668 0.563758389 199 4 5 289 X:2039295-2039356 7 210.5 4232 FBgn0003964 1386.533333 66.48333333 101.85 0.151817482 3.166207069 2.06676485 1 -5 -2 0.15 dme-miR-283-5p 7mer-m1 GATATTT X 20421328 20421334 - X_20421328_20421334_- 0.765341584 0.765583216 0.7654624 0.000170837 Pp4-19C FBtr0346620|FBtr0077324|FBtr0345017|FBtr0340403|FBtr0077325 20421085|20421085|20421085|20421085|20421085 20421864|20421864|20421864|20421864|20421864 X - 20421290 20421359 3'utr Pp4-19C FlyBase G69291.1 ACTAGGAGCCCAAGTTGAGCAAATAGATATTTTTACCGACAGATTGCGTTAAGTCGGCTAAGCTAGGACA 11 20421345 0.97456021 5 10 63 0.916666667 1.041392685 0.25 0.090909091 0.166666667 11 1 0 11 X:20421290-20421359 7 Pp4-19C FBtr0340403|FBtr0345017|FBtr0077324|FBtr0346620|FBtr0077325 20421085|20421085|20421085|20421085|20421085 20421864|20421864|20421864|20421864|20421864 GATATTT 7mer-m1 dme-miR-283-5p X - 20421300 20421362 3'utr Pp4-19C FlyBase G52103.1 TATACTAGGAGCCCAAGTTGAGCAAATAGATATTTTTACCGACAGATTGCGTTAAGTCGGCTA 15 20421345 0.977233831 6 13 88 0.916666667 1.342422681 0.125 0.466666667 0.666666667 15 2 0 22 X:20421300-20421362 7 8 4233 FBgn0023177 682.52 42.84666667 65.32666667 0.011721268 0.186712307 0.122461476 11 11 11 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA X 20426559 20426566 - X_20426559_20426566_- 0.650048876 0.649104982 0.649576929 0.000667438 CG15456 FBtr0077323|FBtr0077323|FBtr0077323 20426507|20426507|20426507 20426645|20426645|20426645 X - 20426541 20426608 3'utr CG15456 FlyBase G69304.1 GCTTCACGCTTACACCAACATTTGTGGAACCCATTTGAAATCCTGTGATATATGGTATATACATATAT 39 20426568 0.815469078 8 34 326 0.88372093 1.102662342 0.186046512 0.102564103 0.186046512 39 3 2 38 X:20426541-20426608 8 CG15456 FBtr0077323|FBtr0077323|FBtr0077323 20426507|20426507|20426507 20426645|20426645|20426645 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 20426531 20426602 3'utr CG15456 FlyBase G52110.1 CGCTTACACCAACATTTGTGGAACCCATTTGAAATCCTGTGATATATGGTATATACATATATAATAATAAAT 24 20426568 0.964384997 10 23 201 1 1.568201724 0.162162162 0.333333333 0.567567568 24 0 0 37 X:20426531-20426602 8 27 4234 FBgn0040650 15.33333333 4.38 6.593333333 1.760869565 6.164383562 4.095045501 2 2 2 0.15 dme-miR-14-3p 6mer2-7 AGACTG X 20426622 20426627 - X_20426622_20426627_- 0.86460592 0.585037435 0.724821678 0.197684782 CG15456 FBtr0077323 20426507 20426645 X - 20426615 20426665 stop_codon CG15456 FlyBase G69305.1 AGGACTGCGTCGTGATGTGATCTCCTACTTTCACGCCTAGACTGTTTAAAC 24 20426636 0.780972529 9 24 179 1 1.462397998 0.206896552 0.166666667 0.310344828 24 0 0 29 X:20426615-20426665 6 CG15456 FBtr0077323 20426507 20426645 AGACTG 6mer2-7 dme-miR-14-3p X - 20426614 20426666 stop_codon CG15456 FlyBase G52111.1 AAGGACTGCGTCGTGATGTGATCTCCTACTTTCACGCCTAGACTGTTTAAACA 11 20426636 0.770090259 4 10 88 0.941176471 0.903089987 0.352941176 0.363636364 0.588235294 11 0 1 16 X:20426614-20426666 6 5.5 4235 FBgn0040650 15.33333333 4.38 6.593333333 0.358695652 1.255707763 0.834175935 9 9 9 0.15 dme-miR-965-3p 7mer-A1 ACGCTTA X 2044559 2044565 - X_2044559_2044565_- 0.694726758 0.590129518 0.642428138 0.07396146 moody FBtr0310289|FBtr0303044|FBtr0303045|FBtr0303043|FBtr0070341|FBtr0310288 2044290|2044290|2044290|2044290|2044290|2044290 2045134|2045243|2045243|2045134|2045134|2045134 X - 2044517 2044622 3'utr moody FlyBase G64199.1 CATACACATGTTACACTACTTAGTAATAGTTTAGTTCGTAAATATTTATGGTCGCTCACGCTTAGTATTAACCCCTTTTCTTTCTACCTTATATGCTAACTTCTAC 32 2044574 0.984574742 8 29 330 0.897435897 1.544068044 0.076923077 0.1875 0.333333333 32 4 0 35 X:2044517-2044622 7 moody FBtr0310288|FBtr0070341|FBtr0303043|FBtr0303045|FBtr0303044|FBtr0310289 2044290|2044290|2044290|2044290|2044290|2044290 2045134|2045134|2045134|2045243|2045243|2045134 ACGCTTA 7mer-A1 dme-miR-965-3p X - 2044544 2044620 3'utr moody FlyBase G48395.1 TACACATGTTACACTACTTAGTAATAGTTTAGTTCGTAAATATTTATGGTCGCTCACGCTTAGTATTAACCCCTTTT 16 2044574 0.989067906 8 16 150 1 1.301029996 0.05 0.1875 0.35 16 0 0 20 X:2044544-2044620 7 13 4236 FBgn0025631 754.5733333 24.87333333 38.48333333 0.017228279 0.522648084 0.337808575 9 9 9 0.15 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT X 20470493 20470499 - X_20470493_20470499_- 0.615930361 0.619555346 0.617742853 0.002563191 RhoGAP19D FBtr0304906|FBtr0301537|FBtr0340405|FBtr0345015 20469953|20469953|20469953|20469953 20472033|20472033|20472033|20472033 X - 20470483 20470510 3'utr RhoGAP19D FlyBase G69309.1 TATTTGGAGAATGGTGCTGGCGGAAATG 13 20470499 0.818407676 3 12 53 1 1.176091259 0.066666667 0.153846154 0.266666667 13 0 0 15 X:20470483-20470510 7 RhoGAP19D FBtr0345015|FBtr0340405|FBtr0301537|FBtr0304906 20469953|20469953|20469953|20469953 20472033|20472033|20472033|20472033 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" X - 20470456 20470518 3'utr RhoGAP19D FlyBase G52113.1 GTATTATTTATTTGGAGAATGGTGCTGGCGGAAATGCATGATATAGGTGCAGCTACAAAGCTA 9 20470499 0.962620947 5 9 50 1 1.113943352 0.153846154 0.333333333 0.538461538 9 0 0 13 X:20470456-20470518 7 9.5 4237 FBgn0031118 1322.826667 17.35333333 26.62 0.007181591 0.547445255 0.35687453 0 0 0 0.15 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG X 20470644 20470650 - X_20470644_20470650_- 0.683974909 0.690689051 0.68733198 0.004747656 RhoGAP19D FBtr0304906|FBtr0301537|FBtr0340405|FBtr0345015 20469953|20469953|20469953|20469953 20472033|20472033|20472033|20472033 X - 20470633 20470673 3'utr RhoGAP19D FlyBase G69311.1 TTTCTTTTCTTCTTTGTACCTCTGTACCTGTTGTACAAAAA 31 20470651 0.802699252 4 31 287 1 1.62324929 0.285714286 0.193548387 0.404761905 31 0 0 42 X:20470633-20470673 7 RhoGAP19D FBtr0345015|FBtr0340405|FBtr0301537|FBtr0304906 20469953|20469953|20469953|20469953 20472033|20472033|20472033|20472033 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" X - 20470635 20470662 3'utr RhoGAP19D FlyBase G52114.1 CTTTGTACCTCTGTACCTGTTGTACAAA 18 20470651 0.786797628 2 18 142 1 1.342422681 0.227272727 0.222222222 0.363636364 18 0 0 22 X:20470635-20470662 7 24.5 4238 FBgn0031118 1322.826667 17.35333333 26.62 0.018520945 1.411832501 0.920360631 1 1 1 0.15 dme-miR-11-3p 7mer-m1 TGTGATG X 20514947 20514953 + X_20514947_20514953_+ 0.608837136 0.609561296 0.609199216 0.000512087 CG1812 FBtr0077312 20514813 20515828 X + 20514910 20514975 3'utr CG1812 FlyBase G63274.1 TGTGTAGCTAGCGTAGACCTATGTACATGCGAGATTTTGTGATGACTGCAGTAACGAAAATGTGCC 28 20514946 0.981450366 8 26 186 0.945945946 1.243038049 0.297297297 0.214285714 0.405405405 28 1 1 35 X:20514910-20514975 7 CG1812 FBtr0077312 20514813 20515828 TGTGATG 7mer-m1 dme-miR-11-3p X + 20514911 20514965 3'utr CG1812 FlyBase G47706.1 GTGTAGCTAGCGTAGACCTATGTACATGCGAGATTTTGTGATGACTGCAGTAACG 18 20514946 0.980803042 6 18 128 1 1.380211242 0.458333333 0.222222222 0.416666667 18 0 0 24 X:20514911-20514965 7 19.5 4239 FBgn0031119 225 8.363333333 12.75 0.086666667 2.331606218 1.529411765 1 1 1 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA X 20515531 20515538 + X_20515531_20515538_+ 0.499360737 0.499086195 0.499223466 0.000194101 CG1812 FBtr0077312 20514813 20515828 X + 20515506 20515560 3'utr CG1812 FlyBase G63277.1 ATAGAGTGTAAAATATGTAGAACATGTACTTAATTTGTATAAACTAGAAAAAGTT 57 20515530 0.895044842 5 56 521 0.984615385 1.806179974 0.246153846 0.122807018 0.230769231 57 1 0 64 X:20515506-20515560 8 CG1812 FBtr0077312 20514813 20515828 GTACTTAA 8mer-A1 dme-miR-252-5p X + 20515509 20515556 3'utr CG1812 FlyBase G47708.1 GAGTGTAAAATATGTAGAACATGTACTTAATTTGTATAAACTAGAAAA 47 20515530 0.886382602 4 47 406 1 1.84509804 0.157142857 0.382978723 0.585714286 47 0 0 70 X:20515509-20515556 8 51.5 4240 FBgn0031119 225 8.363333333 12.75 0.228888889 6.157831806 4.039215686 1 1 1 0.15 dme-miR-986-5p 6mer2-7 TTCGAG X 20515965 20515970 - X_20515965_20515970_- 0.999528059 0.997684676 0.998606368 0.001303481 Tak1 FBtr0077319|FBtr0340404 20515906|20515906 20516300|20516300 X - 20515922 20515998 3'utr Tak1 FlyBase G69331.1 ACACACTTAGCATTAGCACATGTATCTGTTCGAGGAAGCTGACAAGGAGTAGACCAAAAAAATATAAAAACCATCGA 77 20515978 0.983729794 9 77 590 1 1.963787827 0.043478261 0.181818182 0.315217391 77 0 0 92 X:20515922-20515998 6 Tak1 FBtr0077319|FBtr0340404 20515906|20515906 20516300|20516300 TTCGAG 6mer2-7 dme-miR-986-5p X - 20515928 20516000 3'utr Tak1 FlyBase G52125.1 AAACACACTTAGCATTAGCACATGTATCTGTTCGAGGAAGCTGACAAGGAGTAGACCAAAAAAATATAAAAAC 53 20515978 0.982303798 6 53 396 1 1.892094603 0.076923077 0.377358491 0.576923077 53 0 0 78 X:20515928-20516000 6 61.5 4241 FBgn0026323 737.6966667 30.11333333 45.87333333 0.083367599 2.042284702 1.340648162 8 8 8 0.15 dme-miR-970-3p 6mer3-8 TCTTAT X 20516257 20516262 - X_20516257_20516262_- 0.999870536 0.998773362 0.999321949 0.000775767 Tak1 FBtr0077319|FBtr0340404 20515906|20515906 20516300|20516300 X - 20516244 20516309 stop_codon Tak1 FlyBase G69333.1 AATGCGTAGTCTCGTGCGCTGCCGATTCGATCGATCGACTCTCTATGTCTTATAGGCTAGTACTCT 9 20516260 0.758871517 9 9 72 1 1 0.4 0.111111111 0.2 9 0 0 10 X:20516244-20516309 6 Tak1 FBtr0077319|FBtr0340404 20515906|20515906 20516300|20516300 TCTTAT 6mer3-8 dme-miR-970-3p X - 20516243 20516307 stop_codon Tak1 FlyBase G52127.1 TGCGTAGTCTCGTGCGCTGCCGATTCGATCGATCGACTCTCTATGTCTTATAGGCTAGTACTCTA 11 20516290 0.810567704 6 10 83 0.875 1.322219295 0.333333333 0.727272727 0.875 11 3 0 21 X:20516243-20516307 6 5 4242 FBgn0026323 737.6966667 30.11333333 45.87333333 0.006777854 0.166039407 0.108995785 -2 28 13 0.15 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 2055118 2055125 + X_2055118_2055125_+ 0.631124953 0.631114817 0.631119885 7.21E-06 CG4313 FBtr0340109|FBtr0340108|FBtr0340107 2054944|2054944|2054944 2055414|2055414|2055414 X + 2055099 2055148 3'utr CG4313 FlyBase G58179.1 AGTGCCTCCAAAAAAGATTTCTAGTCACATGATCCGGCCGGTCGTCCCTT 14 2055117 0.976627208 4 13 87 0.882352941 1.176091259 0.235294118 0.142857143 0.294117647 14 2 0 15 X:2055099-2055148 8 CG4313 FBtr0340107|FBtr0340109|FBtr0340108 2054944|2054944|2054944 2055414|2055414|2055414 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X + 2055097 2055132 3'utr CG4313 FlyBase G44006.1 ATAGTGCCTCCAAAAAAGATTTCTAGTCACATGATC 8 2055117 0.978349085 2 6 35 0.777777778 0.84509804 0.222222222 0.125 0.222222222 8 2 0 7 X:2055097-2055132 8 9.5 4243 FBgn0025632 50.11333333 3.046666667 4.636666667 0.189570307 3.118161926 2.048885694 1 1 1 0.15 dme-miR-184-3p 6mer3-8 TCCGTC X 21038831 21038836 + X_21038831_21038836_+ 0.88190131 0.866570369 0.87423584 0.010840583 Ntf-2 FBtr0113007 21037719 21039543 X + 21038792 21038918 stop_codon Ntf-2 FlyBase G63291.1 AGGCCAACGCAGGCACCTTCTTTGTGGCCCACGACATCTTCCGTCTCAACATCCACAACTCTGCCTAGGAGCACTCCACTTACCTACGTATGCACACCACTCAGCACCACACATAATCGACATCCAA 191 21038830 0.9685458 13 184 1017 0.960352423 1.736396502 0.035242291 0.162303665 0.295154185 191 6 3 218 X:21038792-21038918 6 Ntf-2 FBtr0113007 21037719 21039543 TCCGTC 6mer3-8 dme-miR-184-3p X + 21038811 21038964 stop_codon Ntf-2 FlyBase G47722.1 CTTTGTGGCCCACGACATCTTCCGTCTCAACATCCACAACTCTGCCTAGGAGCACTCCACTTACCTACGTATGCACACCACTCAGCACCACACATAATCGACATCCAAAGATGCCCAGCGCCAGATGATAACAACAAGCTCGGCAGTGGAACTC 110 21038830 0.864498965 14 107 519 0.962566845 1.77815125 0.096256684 0.445454545 0.673796791 110 5 2 180 X:21038811-21038964 6 123.5 4244 FBgn0031145 2698.153333 430.73 661.49 0.045772047 0.286722541 0.186699723 1 1 1 0.15 dme-miR-1006-3p 7mer-m8 CGAATTT X 21039229 21039235 + X_21039229_21039235_+ 0.47099226 0.579891849 0.525442054 0.077003575 Ntf-2 FBtr0333760|FBtr0113007|FBtr0333762 21038858|21037719|21038858 21039543|21039543|21041467 X + 21039221 21039276 3'utr Ntf-2 FlyBase G63295.1 AGGACTATCGAATTTGGTGGTATGTGCCGTGCTACAAGCTCGTATTTCGAATTCCC 9 21039235 0.92334403 7 9 60 1 1.079181246 0.5 0.333333333 0.5 9 0 0 12 X:21039221-21039276 7 Ntf-2 FBtr0333762|FBtr0113007|FBtr0333760 21038858|21037719|21038858 21041467|21039543|21039543 CGAATTT 7mer-m8 dme-miR-1006-3p X + 21039197 21039251 3'utr Ntf-2 FlyBase G47725.1 TGGATCTCGCGATCTAATTTAGCTAGGACTATCGAATTTGGTGGTATGTGCCGTG 13 21039229 0.976713341 6 12 100 0.941176471 1.204119983 0.705882353 0.230769231 0.411764706 13 1 0 16 X:21039197-21039251 7 7.5 4245 FBgn0031145 2698.153333 430.73 661.49 0.002779679 0.0174123 0.01133804 -6 0 -3 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC X 21050232 21050238 - X_21050232_21050238_- 0.66161564 0.661615645 0.661615643 0 CG1518 FBtr0345923|FBtr0077264 21049883|21049962 21050270|21050270 X - 21050109 21050316 stop_codon CG1518 FlyBase G69358.1 GGTGCGCATCTACAAGGTTAAGGATCTGCCGAATCGTGGAGTCTGAGAAATAAGTGTCGCAGTCATTCCGCTCTATTCTGTGTTCTGTACATTAGCTAACTCTGCCCGTCTCCCTCTATCTCGAATATTTGGCAATCTCTCTCGCTCTATGAGCACCAATTGCTGCATTCTCCTGCTTTGCCCATCATGCATTTAGTTCTACACTGGC 211 21050240 0.896288387 34 202 1959 0.957198444 2.390935107 0.13618677 0.184834123 0.3307393 211 11 0 246 X:21050109-21050316 7 CG1518 FBtr0345923|FBtr0077264 21049883|21049962 21050270|21050270 TGTGTTC 7mer-m8 dme-miR-317-3p X - 21050081 21050382 stop_codon CG1518 FlyBase G52149.1 CGAGATCGGCAACAAGGACTTTGAACTGGATGTCATGGAGGAGGCGTACACCACGGAGCACTGGCTGGTGCGCATCTACAAGGTTAAGGATCTGCCGAATCGTGGAGTCTGAGAAATAAGTGTCGCAGTCATTCCGCTCTATTCTGTGTTCTGTACATTAGCTAACTCTGCCCGTCTCCCTCTATCTCGAATATTTGGCAATCTCTCTCGCTCTATGAGCACCAATTGCTGCATTCTCCTGCTTTGCCCATCATGCATTTAGTTCTACACTGGCACAAAACCACAAAAACCAAGTATTTTTT 155 21050240 0.987604808 37 145 1296 0.94092827 1.503206823 0.126582278 0.35483871 0.578059072 155 8 6 223 X:21050081-21050382 7 92.5 4246 FBgn0031149 1278.48 56.59333333 86.55 0.072351542 1.634468135 1.068746389 2 2 2 0.15 dme-miR-283-5p 7mer-A1 GATATTA X 21062460 21062466 - X_21062460_21062466_- 0.782911819 0.717499281 0.75020555 0.046253622 CG32512 FBtr0077262|FBtr0340438|FBtr0332848|FBtr0332847 21062382|21062275|21062382|21062420 21062966|21062966|21062966|21062966 X - 21062435 21062480 3'utr CG32512 FlyBase G69374.1 CTGTTTTAAGTGCGGATATTAAGTGAATGTAATTTATATTAAAACA 5 21062470 0.99287912 4 4 41 0.625 0.698970004 0 0.4 0.625 5 3 0 5 X:21062435-21062480 7 CG32512 FBtr0332847|FBtr0332848|FBtr0340438|FBtr0077262 21062420|21062382|21062275|21062382 21062966|21062966|21062966|21062966 GATATTA 7mer-A1 dme-miR-283-5p X - 21062441 21062517 3'utr CG32512 FlyBase G52164.1 CTGTTATTTATTAATCCACCGAAAACTATGTTTTTCTCTGTTTTAAGTGCGGATATTAAGTGAATGTAATTTATATT 14 21062453 0.848484342 9 13 131 0.9 1.255272505 0.25 0.428571429 0.6 14 2 0 18 X:21062441-21062517 7 4.5 4247 FBgn0052512 150.89 8.04 12.13666667 0.02982305 0.559701493 0.370777259 4 -13 -4.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA X 21062678 21062685 - X_21062678_21062685_- 0.650079255 0.6500908 0.650085028 8.13E-06 CG32512 FBtr0077262|FBtr0077262|FBtr0077262|FBtr0340438|FBtr0340438|FBtr0340438|FBtr0332848|FBtr0332848|FBtr0332848|FBtr0332847|FBtr0332847|FBtr0332847 21062382|21062382|21062382|21062275|21062275|21062275|21062382|21062382|21062382|21062420|21062420|21062420 21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966 X - 21062595 21063085 stop_codon CG32512 FlyBase G69375.1 AGCGCATCCACAAGGGATTCCGGCGCATTCACATGACCATCGCCATTGGCAATATGACGGTCATGCTGACCACCTGCCTGCAGCTGTATTTTCTGGCATCGAAAATACGCCTTAGCTAAGGCAAGCCCGAAGTGAAGAATTTATAGATTTAGGTATCCACCACATAACAACGCATACACACACACACACATTACTACTACTGTACGTTCCACGTTCGATAAATGTCTCAAATTCAAATATGGCTTATTGAACACTTGAGTTTTTGAACTGGTCCTCCATCCGGCCCCAAATGCCCTTCCTCCGCCCCACACACGCCCACACCACCCATACGCCCATGCACGAAAATATTTAATTTCTCCCAAGGACGCCTTGTTTGCGACGACCTTTCCAATCTGATTTCCTGTGATAAACTCAGCCCAAAACTCCCAAAACAAAACACCCACCCGCAAACCACAGCACATTTAGCCTAGAGTTGATAGCCAATAATTTAC 887 21062688 0.984465956 77 817 6566 0.924783028 1.867875255 0.107039537 0.145434047 0.269045323 887 66 12 959 X:21062595-21063085 8 CG32512 FBtr0332847|FBtr0332847|FBtr0332847|FBtr0332848|FBtr0332848|FBtr0332848|FBtr0340438|FBtr0340438|FBtr0340438|FBtr0077262|FBtr0077262|FBtr0077262 21062420|21062420|21062420|21062382|21062382|21062382|21062275|21062275|21062275|21062382|21062382|21062382 21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 21062645 21062732 3'utr CG32512 FlyBase G52166.1 TTCTCCCAAGGACGCCTTGTTTGCGACGACCTTTCCAATCTGATTTCCTGTGATAAACTCAGCCCAAAACTCCCAAAACAAAACACCC 443 21062688 0.986273785 17 403 3534 0.907378336 2.062957834 0.09733124 0.340857788 0.541601256 443 55 4 578 X:21062645-21062732 8 529 4248 FBgn0052512 150.89 8.04 12.13666667 3.5058652 65.7960199 43.58692667 3 3 3 0.15 dme-miR-184-3p 7mer-m8 TCCGTCC X 21077165 21077171 + X_21077165_21077171_+ 0.607720159 0.654394222 0.631057191 0.033003502 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 X + 21077097 21077221 stop_codon bves FlyBase G63325.1 GTGCAATCTGAATTTATGCAACCGCCCGCTGCTGCTCAACTTGCCACGAACAGAAATCAGAGCACCCATCCGTCCCTTCACCTTTGACCTGCACAAGAACTACCAGAAAAACAACCCCACCCACA 115 21077173 0.966688129 15 105 567 0.90647482 1.498310554 0.086330935 0.173913043 0.316546763 115 10 3 126 X:21077097-21077221 7 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 TCCGTCC 7mer-m8 dme-miR-184-3p X + 21077095 21077200 stop_codon bves FlyBase G47750.1 AAGTGCAATCTGAATTTATGCAACCGCCCGCTGCTGCTCAACTTGCCACGAACAGAAATCAGAGCACCCATCCGTCCCTTCACCTTTGACCTGCACAAGAACTACC 91 21077173 0.969378518 16 82 456 0.905797101 1.795880017 0.057971014 0.417582418 0.615942029 91 12 1 125 X:21077095-21077200 7 86 4249 FBgn0031150 459.0933333 15.14333333 23.32333333 0.187325743 5.679066696 3.687294555 -8 -8 -8 0.15 dme-bantam-3p 7mer-A1 GATCTCA X 21078423 21078429 + X_21078423_21078429_+ 0.823333137 0.808446605 0.815889871 0.010526345 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 X + 21078359 21078459 3'utr bves FlyBase G63328.1 AAGTATAATGACTAGCATTGAAACTGGTTTGATTACAGCTCTTCAGCTTCAATTACCGATTCTAGATCTCAAGATCGATCAGTCTAGTGACAGGTGATAGG 14 21078419 0.981095638 11 14 97 1 1.146128036 0.428571429 0 0 14 0 0 14 X:21078359-21078459 7 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 GATCTCA 7mer-A1 dme-bantam-3p X + 21078409 21078459 3'utr bves FlyBase G47753.1 AATTACCGATTCTAGATCTCAAGATCGATCAGTCTAGTGACAGGTGATAGG 8 21078419 0.885381313 5 7 50 0.857142857 1.079181246 0.285714286 0.75 0.857142857 8 2 0 12 X:21078409-21078459 7 6.5 4250 FBgn0031150 459.0933333 15.14333333 23.32333333 0.014158341 0.429231785 0.278690868 4 4 4 0.15 dme-miR-277-3p 7mer-A1 GCATTTA X 21078535 21078541 + X_21078535_21078541_+ 0.82301699 0.823349291 0.823183141 0.000234972 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 X + 21078525 21078594 3'utr bves FlyBase G63329.1 TTACCGCTTGGCATTTACTGGAAATTTACTGTGCTGGCACATCAATCAAGTCTCTAAATCTTCCATTAAC 12 21078533 0.856169551 8 12 76 1 1.204119983 0.25 0.333333333 0.5 12 0 0 16 X:21078525-21078594 7 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 GCATTTA 7mer-A1 dme-miR-277-3p X + 21078516 21078586 3'utr bves FlyBase G47754.1 TCTTATTTCTTACCGCTTGGCATTTACTGGAAATTTACTGTGCTGGCACATCAATCAAGTCTCTAAATCTT 10 21078533 0.989496815 3 8 91 0.9375 1.176091259 0.4375 0.4 0.625 10 1 0 15 X:21078516-21078586 7 6.5 4251 FBgn0031150 459.0933333 15.14333333 23.32333333 0.014158341 0.429231785 0.278690868 2 2 2 0.15 dme-miR-1007-3p 7mer-m8 TGAGCTT X 21078669 21078675 + X_21078669_21078675_+ 0.610216322 0.606824297 0.608520309 0.002398506 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 X + 21078646 21078704 3'utr bves FlyBase G63330.1 CGTTGATTGATTTGCATACAAATTGAGCTTGAAGAAAGCGTGAAAACTAATTAGAATTA 12 21078669 0.790891532 5 12 66 1 1.176091259 0.2 0.166666667 0.333333333 12 0 0 15 X:21078646-21078704 7 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 TGAGCTT 7mer-m8 dme-miR-1007-3p X + 21078638 21078750 3'utr bves FlyBase G47755.1 CGTTGATTCGTTGATTGATTTGCATACAAATTGAGCTTGAAGAAAGCGTGAAAACTAATTAGAATTAATATCGAATAATATTTGATAATGTTAAGCAATACATAGCCTAAGTT 20 21078669 0.98045255 10 18 116 0.956521739 1.342422681 0.173913043 0.15 0.260869565 20 1 0 22 X:21078638-21078750 7 10.5 4252 FBgn0031150 459.0933333 15.14333333 23.32333333 0.022871166 0.693374422 0.45019294 0 0 0 0.15 dme-miR-1003-3p 6mer3-8 ATGTGA X 21078882 21078887 + X_21078882_21078887_+ 0.991212315 0.656622269 0.823917292 0.236590858 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 X + 21078751 21078903 3'utr bves FlyBase G63331.1 GTTGTACATACGCTATATATATATATTTGCTGTACATAATCCCGAGTGCCCTCAAATCCGAGAACCACACCCCCGTCCCCTAATCTCCACTAATACTCCCCCAAGAAAGTGTAATAAACGTAGTGGAATCAATGTGAATGTAAACAAGCCAAA 44 21078889 0.909026794 13 41 215 0.924528302 1.389166084 0.094339623 0.181818182 0.320754717 44 3 1 49 X:21078751-21078903 6 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 ATGTGA 6mer3-8 dme-miR-1003-3p X + 21078857 21078902 3'utr bves FlyBase G47757.1 AAGTGTAATAAACGTAGTGGAATCAATGTGAATGTAAACAAGCCAA 27 21078889 0.962920868 5 26 145 0.974358974 1.579783597 0 0.407407407 0.58974359 27 1 0 38 X:21078857-21078902 6 25 4253 FBgn0031150 459.0933333 15.14333333 23.32333333 0.054455158 1.650891481 1.071887952 -7 -7 -7 0.15 dme-miR-8-3p 7mer-A1 AGTATTA X 21080882 21080888 + X_21080882_21080888_+ 0.518862888 0.510051645 0.514457266 0.00623053 bves FBtr0332845|FBtr0332846 21080843|21080843 21082391|21082391 X + 21080845 21080922 3'utr bves FlyBase G63333.1 AAGGGATCCAGATGAAATGTTTAGACTTGTGTTTTTGAGTATTATTAGATGTATATTTTAGGCAATACTGAGGAACGA 205 21080865 0.844099422 19 191 2042 0.926640927 2.380211242 0.135135135 0.224390244 0.386100386 205 19 0 240 X:21080845-21080922 7 bves FBtr0332845|FBtr0332846 21080843|21080843 21082391|21082391 AGTATTA 7mer-A1 dme-miR-8-3p X + 21080846 21080914 3'utr bves FlyBase G47759.1 AGGGATCCAGATGAAATGTTTAGACTTGTGTTTTTGAGTATTATTAGATGTATATTTTAGGCAATACTG 167 21080865 0.766667626 19 154 1663 0.908333333 2.338456494 0.133333333 0.353293413 0.55 167 22 0 218 X:21080846-21080914 7 52.5 4254 FBgn0031150 459.0933333 15.14333333 23.32333333 0.114355832 3.466872111 2.250964699 17 17 17 0.15 dme-miR-965-3p 6mer3-8 TACGCT X 21081378 21081383 + X_21081378_21081383_+ 0.943921593 0.999999922 0.971960758 0.039653346 bves FBtr0332845|FBtr0332846 21080843|21080843 21082391|21082391 X + 21081363 21081404 3'utr bves FlyBase G63337.1 AGTTGCAAATTGTATTACGCTAAAACTACGGATTAGACGAAT 6 21081377 0.78452336 3 6 34 1 0.77815125 0 0 0 6 0 0 6 X:21081363-21081404 6 bves FBtr0332845|FBtr0332846 21080843|21080843 21082391|21082391 TACGCT 6mer3-8 dme-miR-965-3p X + 21081350 21081389 3'utr bves FlyBase G47761.1 TTAAAACTAGAATAGTTGCAAATTGTATTACGCTAAAACT 11 21081375 0.593559218 4 10 72 1 1.204119983 0.1875 0.272727273 0.5 11 0 0 16 X:21081350-21081389 6 7 4255 FBgn0031150 459.0933333 15.14333333 23.32333333 0.015247444 0.462249615 0.300128627 1 3 2 0.15 dme-miR-305-3p 7mer-m8 ATGTGCC X 21081854 21081860 + X_21081854_21081860_+ 0.665652879 0.665627346 0.665640112 1.81E-05 bves FBtr0332845|FBtr0332846 21080843|21080843 21082391|21082391 X + 21081822 21081872 3'utr bves FlyBase G63339.1 GACCTTTGATAGTCCTTGTTGCTTTTGTATCTATGTGCCTGAATTCATGCA 18 21081855 0.988981958 2 18 174 1 1.342422681 0 0.166666667 0.318181818 18 0 0 22 X:21081822-21081872 7 bves FBtr0332845|FBtr0332846 21080843|21080843 21082391|21082391 ATGTGCC 7mer-m8 dme-miR-305-3p X + 21081814 21081878 3'utr bves FlyBase G47763.1 TACCCATAGACCTTTGATAGTCCTTGTTGCTTTTGTATCTATGTGCCTGAATTCATGCATGTGCA 14 21081855 0.989525683 2 13 133 0.925925926 0.920818754 0.148148148 0.642857143 0.814814815 14 0 2 25 X:21081814-21081878 7 14.5 4256 FBgn0031150 459.0933333 15.14333333 23.32333333 0.031583992 0.957517059 0.621695012 -1 -1 -1 0.15 dme-miR-1006-3p 6mer2-7 GAATTT X 2111807 2111812 + X_2111807_2111812_+ 0.679426795 0.867549567 0.773488181 0.133022908 csw FBtr0070379|FBtr0070380|FBtr0070378|FBtr0333260 2111732|2111800|2111800|2111800 2115701|2113664|2113664|2115701 X + 2111797 2111892 stop_codon csw FlyBase G58234.1 CATGACAAATGAATTTCTAAGTCGCGACGCCCCCTTGACACGCCCCCTTGACACGCCCCCCTGACACCCACCTCCCTCCACACGCACACAGACCAC 33 2111811 0.999769472 8 31 150 0.975 1.591064607 0.225 0.090909091 0.25 33 1 0 39 X:2111797-2111892 6 csw FBtr0070378|FBtr0333260|FBtr0070379|FBtr0070380 2111800|2111800|2111732|2111800 2113664|2115701|2115701|2113664 GAATTT 6mer2-7 dme-miR-1006-3p X + 2111793 2111873 stop_codon csw FlyBase G44053.1 AAAACATGACAAATGAATTTCTAAGTCGCGACGCCCCCTTGACACGCCCCCTTGACACGCCCCCCTGACACCCACCTCCCT 35 2111811 0.912101243 9 30 158 0.882352941 1.352182518 0.235294118 0.314285714 0.529411765 35 5 1 45 X:2111793-2111873 6 23 4257 FBgn0000382 593.5233333 15.53 24.04 0.038751636 1.481004507 0.956738769 -4 -4 -4 0.15 dme-miR-308-3p 7mer-m1 TGTGATT X 2112756 2112762 + X_2112756_2112762_+ 0.350724262 0.352132915 0.351428589 0.000996031 csw FBtr0070379|FBtr0070380|FBtr0070378|FBtr0333260 2111732|2111800|2111800|2111800 2115701|2113664|2113664|2115701 X + 2112618 2112784 3'utr csw FlyBase G58239.1 TGAAACGGAAACGGGTTACCGGTTGGAGTGCAAATAAAGTTTTTAGTGTAGTAAGTGTTGACAAAATCGATAGAGAAGAAATTAGAGGAGTAACTGAGGCAGTAAGCACGTAACGATAATGATACAAAAAGCGTTGATTGTGATTCGAGTGACAGCGAGAACAGAAA 396 2112755 0.967813999 24 374 2421 0.945295405 1.594091062 0.396061269 0.131313131 0.24726477 396 15 10 432 X:2112618-2112784 7 csw FBtr0070378|FBtr0333260|FBtr0070379|FBtr0070380 2111800|2111800|2111732|2111800 2113664|2115701|2115701|2113664 TGTGATT 7mer-m1 dme-miR-308-3p X + 2112618 2112784 3'utr csw FlyBase G44057.1 TGAAACGGAAACGGGTTACCGGTTGGAGTGCAAATAAAGTTTTTAGTGTAGTAAGTGTTGACAAAATCGATAGAGAAGAAATTAGAGGAGTAACTGAGGCAGTAAGCACGTAACGATAATGATACAAAAAGCGTTGATTGTGATTCGAGTGACAGCGAGAACAGAAA 275 2112755 0.974734241 22 250 1696 0.902147971 1.347042878 0.436754177 0.367272727 0.584725537 275 25 16 378 X:2112618-2112784 7 214 4258 FBgn0000382 593.5233333 15.53 24.04 0.360558697 13.77978107 8.901830283 1 1 1 0.15 dme-miR-317-3p 6mer3-8 TGTGTT X 2113125 2113130 + X_2113125_2113130_+ 0.992267416 0.992413875 0.992340645 0.000103591 csw FBtr0070379|FBtr0070380|FBtr0070378|FBtr0333260 2111732|2111800|2111800|2111800 2115701|2113664|2113664|2115701 X + 2112984 2113154 3'utr csw FlyBase G58242.1 ACAGATCCAGATTCAGATCCAGATCTATATCTCTAGCAGCCAATTTCTGATTTCCCCTTCCCTCTTAGTTTTCCCATTAATTTAGTGATTGTGTGTATATTTTTAATTGTATATTGAAGATTATTTATAGCGATTGTCCATTGTGTTACATTTCAAATGTTCGAAAGAATT 49 2113124 0.990338257 16 45 456 0.93220339 1.263241435 0.06779661 0.163265306 0.305084746 49 2 2 55 X:2112984-2113154 6 csw FBtr0070378|FBtr0333260|FBtr0070379|FBtr0070380 2111800|2111800|2111732|2111800 2113664|2115701|2115701|2113664 TGTGTT 6mer3-8 dme-miR-317-3p X + 2113090 2113164 3'utr csw FlyBase G44062.1 TTGTATATTGAAGATTATTTATAGCGATTGTCCATTGTGTTACATTTCAAATGTTCGAAAGAATTGTATTTAGAA 28 2113124 0.990204993 9 24 256 0.923076923 1.079181246 0.076923077 0.285714286 0.487179487 28 1 2 36 X:2113090-2113164 6 21 4259 FBgn0000382 593.5233333 15.53 24.04 0.035381928 1.352221507 0.873544093 1 1 1 0.15 dme-miR-92b-3p 6mer3-8 GTGCAA X 2113463 2113468 + X_2113463_2113468_+ 0.998731351 0.999999999 0.999365675 0.000897036 csw FBtr0070379|FBtr0070380|FBtr0070378|FBtr0333260 2111732|2111800|2111800|2111800 2115701|2113664|2113664|2115701 X + 2113432 2113473 3'utr csw FlyBase G58244.1 TAGCAGCGAAATGTAAATCAATTAGATTATTGTGCAAATTTG 5 2113461 0.9865841 3 5 42 1 0.698970004 0.4 0 0 5 0 0 5 X:2113432-2113473 6 csw FBtr0070378|FBtr0333260|FBtr0070379|FBtr0070380 2111800|2111800|2111732|2111800 2113664|2115701|2115701|2113664 GTGCAA 6mer3-8 dme-miR-92b-3p X + 2113433 2113502 3'utr csw FlyBase G44065.1 AGCAGCGAAATGTAAATCAATTAGATTATTGTGCAAATTTGAGTAATATATTTAAAACATACCCTTATTT 7 2113461 0.986680895 6 7 56 1 1.079181246 0.083333333 0.285714286 0.583333333 7 0 0 12 X:2113433-2113502 6 3.5 4260 FBgn0000382 593.5233333 15.53 24.04 0.005896988 0.225370251 0.145590682 2 2 2 0.15 dme-bantam-3p 6mer3-8 TGATCT X 2113554 2113559 + X_2113554_2113559_+ 0.917514395 0.91148022 0.914497307 0.004266824 csw FBtr0070379|FBtr0070380|FBtr0070378|FBtr0333260 2111732|2111800|2111800|2111800 2115701|2113664|2113664|2115701 X + 2113521 2113579 3'utr csw FlyBase G58245.1 GCTTTTGTAAGTGCTTTAAATTGTTATTCATCTTGATCTTGCAAAAAAATGAAAAAACC 200 2113553 0.756151155 9 190 1839 0.957692308 1.618048097 0.05 0.24 0.415384615 200 6 5 249 X:2113521-2113579 6 csw FBtr0070378|FBtr0333260|FBtr0070379|FBtr0070380 2111800|2111800|2111732|2111800 2113664|2115701|2115701|2113664 TGATCT 6mer3-8 dme-bantam-3p X + 2113531 2113574 3'utr csw FlyBase G44066.1 GTGCTTTAAATTGTTATTCATCTTGATCTTGCAAAAAAATGAAA 160 2113553 0.75117583 6 154 1474 0.968325792 1.631443769 0.013574661 0.2875 0.484162896 160 3 4 214 X:2113531-2113574 6 177.5 4261 FBgn0000382 593.5233333 15.53 24.04 0.299061536 11.42949131 7.383527454 1 1 1 0.15 dme-miR-34-5p 7mer-A1 ACTGCCA X 2116135 2116141 - X_2116135_2116141_- 0.82005949 0.820433348 0.820246419 0.000264317 ph-d FBtr0070433|FBtr0112843 2115725|2115725 2116865|2116865 X - 2116076 2116202 3'utr ph-d FlyBase G64261.1 TAGCAAGAGGGGTAATATCGTAGCTCAAATGACAGGACGCCACATGTATGATAGAGCATAGACTGCCATCCCAGTCATCAATTCATCACTTTGTATAGAAGTTCACAATTACTCATAATCACTAACG 1317 2116144 0.919919228 17 1284 5161 0.973951715 2.583482164 0.195679797 0.1579347 0.295425667 1317 38 3 1533 X:2116076-2116202 7 ph-d FBtr0070433|FBtr0112843 2115725|2115725 2116865|2116865 ACTGCCA 7mer-A1 dme-miR-34-5p X - 2116120 2116337 3'utr ph-d FlyBase G48452.2 TGACCATGCTGATCTCCCACGACCTTTGCATGGACCTTTGCCTACCTGTGGACCGGGTCCAACCGGGTCTGCCACCCAAGCTGAATTTGATTCACTTGAAGCGGACTTTCAATCCTTTTGTACGTAATCTAAACATAGCAAGAGGGGTAATATCGTAGCTCAAATGACAGGACGCCACATGTATGATAGAGCATAGACTGCCATCCCAGTCATCAATT 834 2116144 0.9406239 25 814 3229 0.978613569 2.423900919 0.205752212 0.42206235 0.644542773 834 25 4 1327 X:2116120-2116337 7 653 4262 FBgn0004860 503.0533333 10.12666667 15.45333333 1.2980731 64.48321264 42.25625539 3 3 3 0.15 dme-miR-1012-3p 6mer3-8 TTGACT X 2126635 2126640 - X_2126635_2126640_- 0.964094642 0.985082549 0.974588595 0.014840686 ph-p FBtr0301515|FBtr0343589|FBtr0070432|FBtr0345598 2126208|2126208|2126208|2126208 2126808|2126808|2126808|2126808 X - 2126626 2126655 3'utr ph-p FlyBase G64274.1 CAGGTCTTAAACCCATTGACTTTGTACATA 10 2126640 0.750495144 2 10 79 1 1.113943352 0 0.2 0.384615385 10 0 0 13 X:2126626-2126655 6 ph-p FBtr0301515|FBtr0343589|FBtr0070432|FBtr0345598 2126208|2126208|2126208|2126208 2126808|2126808|2126808|2126808 TTGACT 6mer3-8 dme-miR-1012-3p X - 2126621 2126663 3'utr ph-p FlyBase G48460.1 CAGGCCATCAGGTCTTAAACCCATTGACTTTGTACATACTCCC 14 2126639 0.813840302 6 14 105 1 1.361727836 0.217391304 0.5 0.695652174 14 0 0 23 X:2126621-2126663 6 11.5 4263 FBgn0004861 584.37 11.91 18.33 0.019679313 0.965575147 0.627386798 0 -1 -0.5 0.15 dme-bantam-3p 7mer-m8 TGATCTC X 2126772 2126778 - X_2126772_2126778_- 0.661408762 0.661606518 0.66150764 0.000139795 ph-p FBtr0301515|FBtr0343589|FBtr0070432|FBtr0345598 2126208|2126208|2126208|2126208 2126808|2126808|2126808|2126808 X - 2126748 2126817 stop_codon ph-p FlyBase G64275.2 GCGCAGTAGGGCAGCTAGAGCACGAAAAGCCGAAAAAGATGATCTCCTAACCGAGCAGTGGACCTGGTTC 187 2126778 0.926166365 4 177 612 0.953051643 1.705436047 0.192488263 0.117647059 0.225352113 187 7 3 203 X:2126748-2126817 7 ph-p FBtr0301515|FBtr0343589|FBtr0070432|FBtr0345598 2126208|2126208|2126208|2126208 2126808|2126808|2126808|2126808 TGATCTC 7mer-m8 dme-bantam-3p X - 2126700 2126821 stop_codon ph-p FlyBase G48461.1 AGGAGCGCAGTAGGGCAGCTAGAGCACGAAAAGCCGAAAAAGATGATCTCCTAACCGAGCAGTGGACCTGGTTCAACCAAGTCTGTCGTGCCAGGTGATTCTGATTCAATCGGGCAGGCGAA 134 2126778 0.877258461 11 130 472 0.972826087 1.65079304 0.135869565 0.298507463 0.489130435 134 2 3 179 X:2126700-2126821 7 151.5 4264 FBgn0004861 584.37 11.91 18.33 0.259253555 12.72040302 8.265139116 0 0 0 0.15 dme-miR-252-5p 8mer-m1 GTACTTAG X 21292425 21292432 - X_21292425_21292432_- 0.63482194 0.634175401 0.634498671 0.000457145 CG1718 FBtr0306679 21292306 21293337 X - 21292396 21292448 3'utr CG1718 FlyBase G69406.1 GTGTATTTATTTCGATGTACTTAGACCGGCTTACCAAAGCGTGTAAATAAGTC 33 21292433 0.753608723 4 33 234 1 1.556302501 0.083333333 0.090909091 0.166666667 33 0 0 36 X:21292396-21292448 8 CG1718 FBtr0306679 21292306 21293337 GTACTTAG 8mer-m1 dme-miR-252-5p X - 21292404 21292449 3'utr CG1718 FlyBase G52188.1 TGTGTATTTATTTCGATGTACTTAGACCGGCTTACCAAAGCGTGTA 32 21292433 0.738927434 4 31 223 0.97826087 1.653212514 0.043478261 0.3125 0.52173913 32 1 0 45 X:21292404-21292449 8 32 4265 FBgn0031170 761.1566667 13.58333333 20.66333333 0.042041279 2.355828221 1.548636877 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 21292709 21292714 - X_21292709_21292714_- 0.999916503 0.999985637 0.99995107 4.89E-05 CG1718 FBtr0306679|FBtr0306679|FBtr0306679 21292306|21292306|21292306 21293337|21293337|21293337 X - 21292660 21292935 stop_codon CG1718 FlyBase G69408.1 TCCAGTCGCCTCTCGGAATTGAGGAAGCTGTGCAAGTGCCTGCTAACTAATGAGTTTTGAACCAACTACCTGAGCGGGTCCGTTACGATCCGATTTTCACCTGATCTTACACTCACAGATAATAATGTTGTATACCAAAGCAACGCCGATGCCTGAACAGCTAACAAATAGTTTCTAAGCTCGACCTGACAATAGATAGCAGCTATTATGCCTTATTTCATTGTGATCATCTAGCGAAATTTGCACCAAACGACGAGAGATCTTTAATTTTTATGT 238 21292715 0.984718201 43 227 1827 0.95532646 1.489802286 0.18556701 0.18907563 0.336769759 238 5 8 278 X:21292660-21292935 6 CG1718 FBtr0306679|FBtr0306679|FBtr0306679 21292306|21292306|21292306 21293337|21293337|21293337 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 21292659 21292897 stop_codon CG1718 FlyBase G52191.1 CCTGCTAACTAATGAGTTTTGAACCAACTACCTGAGCGGGTCCGTTACGATCCGATTTTCACCTGATCTTACACTCACAGATAATAATGTTGTATACCAAAGCAACGCCGATGCCTGAACAGCTAACAAATAGTTTCTAAGCTCGACCTGACAATAGATAGCAGCTATTATGCCTTATTTCATTGTGATCATCTAGCGAAATTTGCACCAAACGACGAGAGATCTTTAATTTTTATGTA 168 21292715 0.984176359 41 155 1237 0.906015038 1.603865792 0.112781955 0.392857143 0.616541353 168 20 5 241 X:21292659-21292897 6 70 4266 FBgn0031170 761.1566667 13.58333333 20.66333333 0.091965298 5.153374233 3.387643168 1 1 1 0.15 dme-bantam-3p 6mer3-8 TGATCT X 21292829 21292834 - X_21292829_21292834_- 0.98241464 0.990815043 0.986614842 0.00593998 CG1718 FBtr0306679 21292306 21293337 X - 21292660 21292935 stop_codon CG1718 FlyBase G69408.1 TCCAGTCGCCTCTCGGAATTGAGGAAGCTGTGCAAGTGCCTGCTAACTAATGAGTTTTGAACCAACTACCTGAGCGGGTCCGTTACGATCCGATTTTCACCTGATCTTACACTCACAGATAATAATGTTGTATACCAAAGCAACGCCGATGCCTGAACAGCTAACAAATAGTTTCTAAGCTCGACCTGACAATAGATAGCAGCTATTATGCCTTATTTCATTGTGATCATCTAGCGAAATTTGCACCAAACGACGAGAGATCTTTAATTTTTATGT 238 21292834 0.984718201 43 227 1827 0.95532646 1.489802286 0.18556701 0.18907563 0.336769759 238 5 8 278 X:21292660-21292935 6 CG1718 FBtr0332489|FBtr0306679 21292712|21292306 21293337|21293337 TGATCT 6mer3-8 dme-bantam-3p X - 21292659 21292897 stop_codon CG1718 FlyBase G52191.1 CCTGCTAACTAATGAGTTTTGAACCAACTACCTGAGCGGGTCCGTTACGATCCGATTTTCACCTGATCTTACACTCACAGATAATAATGTTGTATACCAAAGCAACGCCGATGCCTGAACAGCTAACAAATAGTTTCTAAGCTCGACCTGACAATAGATAGCAGCTATTATGCCTTATTTCATTGTGATCATCTAGCGAAATTTGCACCAAACGACGAGAGATCTTTAATTTTTATGTA 168 21292834 0.984176359 41 155 1237 0.906015038 1.603865792 0.112781955 0.392857143 0.616541353 168 20 5 241 X:21292659-21292897 6 58.5 4267 FBgn0031170 761.1566667 13.58333333 20.66333333 0.076856714 4.306748466 2.831101791 0 0 0 0.15 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT X 21321214 21321220 - X_21321214_21321220_- 0.433081998 0.469999172 0.451540585 0.026104402 Dd FBtr0339624|FBtr0077226|FBtr0339623 21319789|21319789|21319789 21321321|21321321|21321321 X - 21321190 21321413 stop_codon Dd FlyBase G69428.2 TGTCGCTGCTGCCCATGCTGGATGCGCTGAGGTTCACGAACGACGTGAGATCGGTGCTGTCGAGGAACTTGCACCTGCACCGCCTCTGGTAGCAGGTGGGCCGCCTGTCGCTAGTTTAGTTTATCTATTTAGAAGGAGCACTGAGGGCCAGCGAAGTGGGGAGAATATCTTCTGAAATTAACAACAAACAAGGTGGTGCTGTGACACATTAACGAATTTGTTCA 202 21321219 0.952119205 22 191 893 0.954166667 1.514737442 0.058333333 0.163366337 0.295833333 202 5 6 229 X:21321190-21321413 7 Dd FBtr0077226|FBtr0339623|FBtr0339624 21319789|21319789|21319789 21321321|21321321|21321321 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" X - 21321191 21321259 3'utr Dd FlyBase G52211.2 AGTGGGGAGAATATCTTCTGAAATTAACAACAAACAAGGTGGTGCTGTGACACATTAACGAATTTGTTC 84 21321219 0.844775656 6 79 329 0.96124031 1.792391689 0.015503876 0.428571429 0.627906977 84 4 1 124 X:21321191-21321259 7 122.5 4268 FBgn0029067 2906.393333 121.66 187.2766667 0.042148459 1.006904488 0.654112454 -1 -1 -1 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 21327635 21327641 + X_21327635_21327641_+ 0.796514271 0.797381696 0.796947984 0.000613344 CG1486 FBtr0077190|FBtr0077191 21327402|21327402 21328150|21328150 X + 21327617 21327664 3'utr CG1486 FlyBase G63379.1 ACTTAAACGAAAAGAATTCCAAAGAGGATGATTGTTCGCCCGAAAAGA 24 21327633 0.906556673 3 24 71 1 1.462397998 0.310344828 0.208333333 0.344827586 24 0 0 29 X:21327617-21327664 7 CG1486 FBtr0077190|FBtr0077191 21327402|21327402 21328150|21328150 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X + 21327621 21327658 3'utr CG1486 FlyBase G47785.1 AAACGAAAAGAATTCCAAAGAGGATGATTGTTCGCCCG 21 21327633 0.865720789 3 21 52 1 1.544068044 0.514285714 0.476190476 0.685714286 21 0 0 35 X:21327621-21327658 7 22.5 4269 FBgn0031174 458.93 15.08666667 23.13333333 0.049027085 1.49138312 0.972622478 2 2 2 0.15 dme-bantam-3p 6mer3-8 TGATCT X 21327734 21327739 + X_21327734_21327739_+ 0.999997906 0.999999957 0.999998932 1.48E-06 CG1486 FBtr0077190|FBtr0077191 21327402|21327402 21328150|21328150 X + 21327670 21327765 3'utr CG1486 FlyBase G63380.1 AGATGATGATGATATGATCCAATTGAATTGCTTTTATGTATTTATATGTATATGGCTATTTCTATGATCTTTTATATATCTCCATTATATATTATA 72 21327734 0.994667713 8 69 949 0.967032967 1.944482672 0 0.180555556 0.351648352 72 3 0 88 X:21327670-21327765 6 CG1486 FBtr0077190|FBtr0077191 21327402|21327402 21328150|21328150 TGATCT 6mer3-8 dme-bantam-3p X + 21327719 21327750 3'utr CG1486 FlyBase G47786.1 ATATGGCTATTTCTATGATCTTTTATATATCT 31 21327734 0.706210673 5 30 374 0.95 1.579783597 0 0.258064516 0.425 31 2 0 38 X:21327719-21327750 6 50 4270 FBgn0031174 458.93 15.08666667 23.13333333 0.108949077 3.314184711 2.161383285 0 0 0 0.15 dme-miR-965-3p 7mer-m8 TACGCTT X 21327843 21327849 + X_21327843_21327849_+ 0.620203656 0.620202533 0.620203094 8.49E-07 CG1486 FBtr0077190|FBtr0077191 21327402|21327402 21328150|21328150 X + 21327768 21327858 3'utr CG1486 FlyBase G63381.1 ATTTTACCTTATACTTTACTCCCACCATTATTGTTGATTATGATCAGAGGGAAATGTGCGTAACTTCGTCCTCTTTACGCTTTTATTTTTT 22 21327842 0.990855124 8 21 222 0.931034483 0.954242509 0.068965517 0.318181818 0.482758621 22 0 2 27 X:21327768-21327858 7 CG1486 FBtr0077190|FBtr0077191 21327402|21327402 21328150|21328150 TACGCTT 7mer-m8 dme-miR-965-3p X + 21327825 21327859 3'utr CG1486 FlyBase G47788.1 GCGTAACTTCGTCCTCTTTACGCTTTTATTTTTTT 9 21327842 0.824757672 4 9 99 1 1 0 0.111111111 0.2 9 0 0 10 X:21327825-21327859 7 12 4271 FBgn0031174 458.93 15.08666667 23.13333333 0.026147779 0.795404331 0.518731988 1 1 1 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC X 21344955 21344960 + X_21344955_21344960_+ 0.99995099 0.999988964 0.999969977 2.69E-05 fliI FBtr0077192 21344184 21345088 X + 21344907 21345041 3'utr fliI FlyBase G63405.1 ATATATATATATATACATACGCTGAGCTGAGAGGATTACTCCCCTGTGCTAGTCCTTTTAAAATGTTAACCTACTTAAAGCTAGCCTGTAATAAAGTCAAGGAAGCACTAAAACTAATTGTACAAATGCCCACGT 69 21344953 0.962612703 14 64 514 0.912087912 1.618048097 0.021978022 0.217391304 0.406593407 69 7 1 83 X:21344907-21345041 6 fliI FBtr0077192 21344184 21345088 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" X + 21344908 21344975 3'utr fliI FlyBase G47802.1 TATATATATATATACATACGCTGAGCTGAGAGGATTACTCCCCTGTGCTAGTCCTTTTAAAATGTTAA 41 21344953 0.894726351 6 37 323 0.936507937 1.293730757 0.031746032 0.414634146 0.619047619 41 2 2 59 X:21344908-21344975 6 43 4272 FBgn0000709 400.18 10.03 15.43 0.107451647 4.287138584 2.786779002 2 2 2 0.15 dme-miR-968-5p 8mer-A1 ACTACTTA X 21346812 21346819 + X_21346812_21346819_+ 0.590490463 0.561781779 0.576136121 0.020300116 dod FBtr0077193 21346430 21346858 X + 21346760 21346836 3'utr dod FlyBase G63411.1 AAAGGGAATCGCAATTAGGAATTGGAATCTGAGTGAAGCTGTTTACTTTGCGACTACTTATTTATTAGACTAAAGCT 13 21346808 0.991094785 7 11 114 0.857142857 1.079181246 0.142857143 0.076923077 0.142857143 13 2 0 12 X:21346760-21346836 8 dod FBtr0077193 21346430 21346858 ACTACTTA 8mer-A1 dme-miR-968-5p X + 21346755 21346834 3'utr dod FlyBase G47807.1 AAGGGAAAGGGAATCGCAATTAGGAATTGGAATCTGAGTGAAGCTGTTTACTTTGCGACTACTTATTTATTAGACTAAAG 9 21346782 0.984918386 5 9 76 1 1.079181246 0.416666667 0.222222222 0.416666667 9 0 0 12 X:21346755-21346834 8 6.5 4273 FBgn0015379 457.9566667 55.63 84.90666667 0.014193483 0.11684343 0.076554648 4 30 17 0.15 dme-miR-276a-3p 7mer-A1 GTTCCTA X 21354267 21354273 + X_21354267_21354273_+ 0.823051697 0.823312687 0.823182192 0.000184555 sol FBtr0089679 21354101 21357912 X + 21354243 21354291 3'utr sol FlyBase G63418.1 GTAAGATGTGGATATGCATCAAATGTTCCTATGCCTACAACCGACTCTG 25 21354266 0.782480123 3 25 182 1 1.462397998 0.172413793 0.12 0.24137931 25 0 0 29 X:21354243-21354291 7 sol FBtr0089679 21354101 21357912 GTTCCTA 7mer-A1 dme-miR-276a-3p X + 21354247 21354305 3'utr sol FlyBase G47814.1 GATGTGGATATGCATCAAATGTTCCTATGCCTACAACCGACTCTGGCTCCAGACTTGCG 13 21354266 0.760785556 6 13 84 1 1.255272505 0.277777778 0.307692308 0.5 13 0 0 18 X:21354247-21354305 7 17.5 4274 FBgn0003464 838.5366667 18.14666667 27.72333333 0.02086969 0.964364438 0.631237225 1 1 1 0.15 dme-miR-263a-5p 6mer2-7 TGCCAT X 21355764 21355769 + X_21355764_21355769_+ 0.679088297 0.607805315 0.643446806 0.050404693 sol FBtr0089679 21354101 21357912 X + 21355729 21355784 3'utr sol FlyBase G63421.1 CGGCAAGTGGACGACGGTGCTGGTGGATGATCTGCTGCCATGCGACAAGCGTGGCC 13 21355756 0.721381707 3 12 81 0.928571429 1.113943352 0.428571429 0.076923077 0.142857143 13 1 0 13 X:21355729-21355784 6 sol FBtr0089679 21354101 21357912 TGCCAT 6mer2-7 dme-miR-263a-5p X + 21355740 21355773 3'utr sol FlyBase G47817.1 CGACGGTGCTGGTGGATGATCTGCTGCCATGCGA 5 21355757 0.705691392 3 5 32 1 0.698970004 0.2 0 0 5 0 0 5 X:21355740-21355773 6 8.5 4275 FBgn0003464 838.5366667 18.14666667 27.72333333 0.010136706 0.468405584 0.306600938 8 7 7.5 0.15 dme-miR-307a-3p 8mer-A1 GGTTGTGA X 21357059 21357066 + X_21357059_21357066_+ 0.669750019 0.612907382 0.6413287 0.040193788 sol FBtr0089679 21354101 21357912 X + 21357033 21357130 intron-3'utr sol FlyBase G63427.1 TTTCCTTTACAGGGCTGGGCGGGTCTGGTTGTGATGGTGGAAAATAGACATGAGAATAAGTGGATCCATGTGAAATGTGATTGCCAGGAGAGCTACAA 96 21357058 0.956625751 10 91 551 0.947826087 1.736396502 0.460869565 0.166666667 0.304347826 96 5 1 109 X:21357033-21357130 8 sol FBtr0089679 21354101 21357912 GGTTGTGA 8mer-A1 dme-miR-307a-3p X + 21357043 21357140 intron-3'utr sol FlyBase G47823.1 AGGGCTGGGCGGGTCTGGTTGTGATGGTGGAAAATAGACATGAGAATAAGTGGATCCATGTGAAATGTGATTGCCAGGAGAGCTACAATGTGGTGTCG 67 21357058 0.962499778 12 63 370 0.933962264 1.217483944 0.5 0.432835821 0.641509434 67 2 5 99 X:21357043-21357140 8 45.5 4276 FBgn0003464 838.5366667 18.14666667 27.72333333 0.054261193 2.507347539 1.641216785 1 1 1 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 21357546 21357552 + X_21357546_21357552_+ 0.629220813 0.632378207 0.63079951 0.002232619 sol FBtr0089679|FBtr0089678|FBtr0346608|FBtr0301583 21354101|21357433|21357433|21357433 21357912|21357912|21357912|21357912 X + 21357474 21357623 3'utr sol FlyBase G63430.1 TCGATGCTACCCCGCGATATGTCGCTGTTCGAATCCTGATTTGCATGCGTCTCCTCTCAATTCTACCCGTCTTCTAGTCGATGTTCTGTTAACGAATCACACATTACAGCGAAAAACCCAAAGTTGAAACCAATCAGCATGCGAAACAAT 185 21357545 0.986891627 17 178 1548 0.973333333 2.039414119 0.426666667 0.189189189 0.333333333 185 5 1 219 X:21357474-21357623 7 sol FBtr0346608|FBtr0301583|FBtr0089679|FBtr0089678 21357433|21357433|21354101|21357433 21357912|21357912|21357912|21357912 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X + 21357493 21357618 3'utr sol FlyBase G47825.1 TGTCGCTGTTCGAATCCTGATTTGCATGCGTCTCCTCTCAATTCTACCCGTCTTCTAGTCGATGTTCTGTTAACGAATCACACATTACAGCGAAAAACCCAAAGTTGAAACCAATCAGCATGCGAA 124 21357545 0.985303176 14 119 977 0.965517241 1.526339277 0.390804598 0.298387097 0.5 124 2 4 168 X:21357493-21357618 7 132.5 4277 FBgn0003464 838.5366667 18.14666667 27.72333333 0.158013365 7.301616458 4.77936756 1 1 1 0.15 dme-miR-317-3p 6mer3-8 TGTGTT X 21361347 21361352 + X_21361347_21361352_+ 0.999914824 1 0.999957412 6.02E-05 1-Sep FBtr0077198 21360837 21361688 X + 21361184 21361381 3'utr 1-Sep FlyBase G63439.1 CTTCTATCAAGCGAAACCACACACGAAAACAATTGTATTCCTATTATGTATTTAGACGCGATTAACAATGAATTATTATTGTAATACGCATCTAGGCTAAGCGAATCCAATCCGATTTATATTGTATGTTAATTCATTTTTGTCTGTTTACCTTACCCTTATCTGTGTTGTCTCAAAGCGAGCAATTTATTTAGGTTA 115 21361336 0.990917614 28 107 1107 0.9375 1.829303773 0.215277778 0.208695652 0.368055556 115 8 1 135 X:21361184-21361381 6 1-Sep FBtr0077198 21360837 21361688 TGTGTT 6mer3-8 dme-miR-317-3p X + 21361320 21361370 3'utr 1-Sep FlyBase G47833.1 TTTTTGTCTGTTTACCTTACCCTTATCTGTGTTGTCTCAAAGCGAGCAATT 52 21361336 0.835280442 10 46 498 0.894736842 1.355387658 0.157894737 0.365384615 0.565789474 52 6 2 68 X:21361320-21361370 6 51.5 4278 FBgn0011710 1695 101.9 156.09 0.030383481 0.505397448 0.329937856 11 11 11 0.15 dme-miR-14-3p 6mer3-8 AAGACT X 21361626 21361631 + X_21361626_21361631_+ 0.9033469 0.950408325 0.926877613 0.033277435 1-Sep FBtr0077198 21360837 21361688 X + 21361563 21361654 3'utr 1-Sep FlyBase G63442.1 AGTGCACTCCTTTAACGGATGAAACAAAAACCAAAATGTGAAATCTCTTTTATTATGTATATGAAGACTTTTTTAACTCAATATAATCCTCT 122 21361633 0.782023511 16 117 1052 0.960784314 1.866287339 0.039215686 0.229508197 0.385620915 122 5 1 147 X:21361563-21361654 6 1-Sep FBtr0077198 21360837 21361688 AAGACT 6mer3-8 dme-miR-14-3p X + 21361483 21361646 3'utr 1-Sep FlyBase G47835.1 AAACAGTGATCCCTTCCTAGGCGGTCCCGGGAACCCATGGCCAGTTGCGGAAACTCGGTTTAGCAGGCTACTCGCTTAAAAGTGCACTCCTTTAACGGATGAAACAAAAACCAAAATGTGAAATCTCTTTTATTATGTATATGAAGACTTTTTTAACTCAATAT 84 21361633 0.983699791 21 83 681 0.991452991 2.064457989 0.153846154 0.321428571 0.512820513 84 1 0 116 X:21361483-21361646 6 65.5 4279 FBgn0011710 1695 101.9 156.09 0.038643068 0.642787046 0.419629701 -7 -7 -7 0.15 dme-bantam-3p 6mer3-8 TGATCT X 21372780 21372785 + X_21372780_21372785_+ 0.913778373 0.90886214 0.911320256 0.003476349 bbx FBtr0100598|FBtr0331745|FBtr0331744|FBtr0100599 21372235|21372235|21372235|21372235 21373145|21373145|21373145|21373145 X + 21372731 21372809 3'utr bbx FlyBase G63465.1 AAGCTATTTGCTGGTGGTGCCCAATGGAGATGGAAAAACAGACATTCGTTGATCTACAATTTAGTCAATAATATTATGT 267 21372780 0.764075045 10 258 2169 0.969512195 2.50242712 0.021341463 0.164794007 0.320121951 267 10 0 318 X:21372731-21372809 6 bbx FBtr0331744|FBtr0100599|FBtr0100598|FBtr0331745 21372235|21372235|21372235|21372235 21373145|21373145|21373145|21373145 TGATCT 6mer3-8 dme-bantam-3p X + 21372739 21372805 3'utr bbx FlyBase G47850.1 TGCTGGTGGTGCCCAATGGAGATGGAAAAACAGACATTCGTTGATCTACAATTTAGTCAATAATATT 214 21372780 0.983319811 8 209 1645 0.98245614 2.225309282 0.035087719 0.406542056 0.628654971 214 5 1 336 X:21372739-21372805 6 235.5 4280 FBgn0024251 1081.59 31.92333333 49.23333333 0.217735001 7.37704918 4.783344617 0 0 0 0.15 dme-miR-305-3p 6mer2-7 TGTGCC X 21384550 21384555 + X_21384550_21384555_+ 0.996131687 0.889950696 0.943041192 0.075081305 slgA FBtr0307529|FBtr0077204|FBtr0307527|FBtr0077207|FBtr0077210|FBtr0307526|FBtr0077206|FBtr0077205|FBtr0307524|FBtr0307525|FBtr0077208|FBtr0077209 21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904 21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159 X + 21384536 21384562 3'utr slgA FlyBase G63473.1 ATTAACTTCGTGATTGTGCCTGTTCCT 9 21384550 0.708698496 4 8 79 1 0.954242509 0 0 0 9 0 0 9 X:21384536-21384562 6 slgA FBtr0077205|FBtr0307524|FBtr0077208|FBtr0307525|FBtr0077209|FBtr0307529|FBtr0077206|FBtr0077204|FBtr0077210|FBtr0077207|FBtr0307527|FBtr0307526 21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904 21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159 TGTGCC 6mer2-7 dme-miR-305-3p X + 21384511 21384573 3'utr slgA FlyBase G47859.1 TATGGCTGCATTTTAGTCTAGATTCATTAACTTCGTGATTGTGCCTGTTCCTCAGTATCAGTT 11 21384551 0.986943706 4 11 100 1 1.278753601 0.210526316 0.363636364 0.631578947 11 0 0 19 X:21384511-21384573 6 9.5 4281 FBgn0003423 397.6533333 14.53333333 22.43333333 0.023890156 0.653669725 0.423476969 0 -1 -0.5 0.15 dme-miR-980-3p 7mer-A1 GCAGCTA X 2150460 2150466 - X_2150460_2150466_- 0.82334956 0.823349538 0.823349549 7.07E-08 wapl FBtr0070430|FBtr0344159|FBtr0070429 2150105|2149934|2150105 2150876|2150876|2150876 X - 2150437 2150477 3'utr wapl FlyBase G64288.1 AAGCAATATTAGCAGCTAAATGTCGGCTTACCCTCGAAAGC 15 2150449 0.696462347 5 13 78 0.761904762 1.204119983 0 0.333333333 0.523809524 15 5 0 16 X:2150437-2150477 7 wapl FBtr0070430|FBtr0344159|FBtr0070429 2150105|2149934|2150105 2150876|2150876|2150876 GCAGCTA 7mer-A1 dme-miR-980-3p X - 2150437 2150488 3'utr wapl FlyBase G48468.1 TATATAGTCATAAGCAATATTAGCAGCTAAATGTCGGCTTACCCTCGAAAGC 9 2150468 0.954417298 4 9 43 1 1.041392685 0.181818182 0.222222222 0.363636364 9 0 0 11 X:2150437-2150488 7 9.5 4282 FBgn0004655 814.8266667 14.46333333 22.20666667 0.011658921 0.656833372 0.42779946 -17 2 -7.5 0.15 dme-miR-995-5p 6mer3-8 AATTCG X 21609468 21609473 - X_21609468_21609473_- 0.999887002 0.980363409 0.990125205 0.01380527 CG33502 FBtr0070055 21609355 21609507 X - 21609442 21609481 3'utr CG33502 FlyBase G69494.1 ACGTTGCTAATTCGCTAGTGAAACCAATAGTTAGTTGTAT 5 21609472 0.982349635 3 4 30 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 X:21609442-21609481 6 CG33502 FBtr0070055 21609355 21609507 AATTCG 6mer3-8 dme-miR-995-5p X - 21609386 21609479 3'utr CG33502 FlyBase G52266.1 GTTGCTAATTCGCTAGTGAAACCAATAGTTAGTTGTATACATAACGTACATGTAGTTGATTACTTAAATAAATCTACGGCTTTAAGCTTAACCG 12 21609451 0.980143517 5 11 83 0.958333333 1.361727836 0.208333333 0.666666667 0.833333333 12 1 0 23 X:21609386-21609479 6 6 4283 FBgn0053502 0.98 0.11 0.166666667 6.12244898 54.54545455 36 -1 -22 -11.5 0.15 dme-miR-995-5p 6mer3-8 AATTCG X 21615560 21615565 - X_21615560_21615565_- 0.999999976 0.810203819 0.905101897 0.13420618 CG32857 FBtr0070052 21615447 21615599 X - 21615531 21615573 3'utr CG32857 FlyBase G69499.1 ACGTTGCTAATTCGCTAGTGAAACCAATAGTTAGTTGTATACA 8 21615565 0.643737182 6 8 54 1 0.903089987 0.125 0 0 8 0 0 8 X:21615531-21615573 6 CG32857 FBtr0070052 21615447 21615599 AATTCG 6mer3-8 dme-miR-995-5p X - 21615524 21615584 3'utr CG32857 FlyBase G52269.1 TTTCCCTGCTTACGTTGCTAATTCGCTAGTGAAACCAATAGTTAGTTGTATACATAACGTA 7 21615563 0.984990333 3 6 51 0.857142857 1.079181246 0 0.714285714 0.857142857 7 2 0 12 X:21615524-21615584 6 6 4284 FBgn0052857 214.41 24.80666667 37.58333333 0.027983769 0.241870465 0.159645233 0 -2 -1 0.15 dme-miR-995-5p 6mer3-8 AATTCG X 21621652 21621657 - X_21621652_21621657_- 0.999863662 0.998148464 0.999006063 0.00121283 CG32500 FBtr0077374 21621539 21621691 X - 21621615 21621669 3'utr CG32500 FlyBase G69504.1 GCTTACGTTGCTAATTCGCTAGTGAAACCAATAGTTAGTTGTATACATAACGTAC 8 21621656 0.98132456 4 8 58 1 1.041392685 0.090909091 0.375 0.545454545 8 0 0 11 X:21621615-21621669 6 CG32500 FBtr0077374 21621539 21621691 AATTCG 6mer3-8 dme-miR-995-5p X - 21621594 21621663 3'utr CG32500 FlyBase G52273.1 GTTGCTAATTCGCTAGTGAAACCAATAGTTAGTTGTATACATAACGTACATGTAGTTGATTACTTAAATA 6 21621635 0.984965601 5 5 46 0.8 0.903089987 0.1 0.333333333 0.6 6 2 0 8 X:21621594-21621663 6 5 4285 FBgn0052500 0 0 0 Inf Inf Inf -1 -22 -11.5 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT X 2172015 2172021 + X_2172015_2172021_+ 0.588923482 0.577965399 0.58344444 0.007748547 CG3630 FBtr0310076|FBtr0310500|FBtr0070385|FBtr0310501 2171927|2171927|2171927|2171927 2172281|2172281|2172281|2172281 X + 2171989 2172027 3'utr CG3630 FlyBase G58268.1 AAAGGAACTCTCGCAACTACTAAAGCGGCAGCTTTAAAT 7 2171999 0.692169268 3 6 27 0.888888889 0.903089987 0 0.285714286 0.444444444 7 1 0 8 X:2171989-2172027 7 CG3630 FBtr0070385|FBtr0310501|FBtr0310076|FBtr0310500 2171927|2171927|2171927|2171927 2172281|2172281|2172281|2172281 GGCAGCT 7mer-m8 dme-miR-980-3p X + 2171988 2172028 3'utr CG3630 FlyBase G44082.1 AAAAGGAACTCTCGCAACTACTAAAGCGGCAGCTTTAAATT 5 2172022 0.958119426 2 4 28 0.8 0.602059991 0 0 0 5 1 0 4 X:2171988-2172028 7 4.5 4286 FBgn0023540 152.6666667 11.14666667 17.14333333 0.029475983 0.403708134 0.262492709 16 -7 4.5 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 2205283 2205288 + X_2205283_2205288_+ 0.999141364 0.674147319 0.836644342 0.229805532 Mct1 FBtr0070393|FBtr0342765 2204927|2204927 2205373|2205373 X + 2205267 2205375 3'utr Mct1 FlyBase G58288.1 ACGTACATGTACCCATACCAAATTATTGTTATTCTATTATGACTGTATGCCTGTGCGTGTGTGTCCGTCTGTGTATGCGCCATTAAAGAAAGCTTTTGTACAACAACAG 123 2205312 0.930149214 23 108 1136 0.884892086 1.788875116 0.302158273 0.113821138 0.215827338 123 15 1 123 X:2205267-2205375 6 Mct1 FBtr0070393|FBtr0342765 2204927|2204927 2205373|2205373 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 2205257 2205376 3'utr Mct1 FlyBase G44099.1 GTATGCCTACACGTACATGTACCCATACCAAATTATTGTTATTCTATTATGACTGTATGCCTGTGCGTGTGTGTCCGTCTGTGTATGCGCCATTAAAGAAAGCTTTTGTACAACAACAGA 61 2205312 0.971370409 18 53 532 0.893617021 1.62324929 0.329787234 0.360655738 0.585106383 61 9 1 84 X:2205257-2205376 6 21 4287 FBgn0023549 120.6466667 4.866666667 7.343333333 0.174061999 4.315068493 2.859736723 -29 -29 -29 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 2237105 2237110 + X_2237105_2237110_+ 0.974361155 0.969743599 0.972052377 0.003265136 pcx FBtr0342766|FBtr0332381|FBtr0344153 2236594|2236594|2236594 2238045|2238045|2237961 X + 2237064 2237159 3'utr pcx FlyBase G58318.1 AATTGTTGTAACTTGCGAATTGTATAATATGGAAACGGAAAACCAAATGCTTCTCAAACATTACCTATTTTGTTCTTTCTCCTCTCGCTAGCCAAT 24 2237111 0.969194783 7 23 142 1 1.505149978 0.03125 0.304347826 0.5 23 0 0 32 X:2237064-2237159 6 pcx FBtr0344153|FBtr0342766|FBtr0332381 2236594|2236594|2236594 2237961|2238045|2238045 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 2237099 2237133 3'utr pcx FlyBase G44115.1 CGGAAAACCAAATGCTTCTCAAACATTACCTATTT 11 2237111 0.972720594 3 10 54 0.866666667 1.113943352 0.266666667 0.272727273 0.466666667 11 2 0 13 X:2237099-2237133 6 12 4288 FBgn0003048 2230.713333 22.34666667 34.36666667 0.005379445 0.53699284 0.349175558 -6 -6 -6 0.15 dme-miR-14-3p 7mer-A1 AGACTGA X 2237462 2237468 + X_2237462_2237468_+ 0.822788323 0.822842723 0.822815523 3.85E-05 pcx FBtr0342766|FBtr0332381|FBtr0344153 2236594|2236594|2236594 2238045|2238045|2237961 X + 2237358 2237517 3'utr pcx FlyBase G58321.1 CTAAGATATTACACACAATTCCTAGATGATTAAGAGGATGAGGATGAGGACGAGGATCAAGTGGAATGACGACATGTAAAGCTCTCACGTTGCCTTAATATATTAGACTGATTTTTTCTACACACATTTGTAGACGTATGGTGGATGACATTTGAGAAGT 305 2237460 0.992172243 30 298 3345 0.977591036 2.241795431 0.019607843 0.144262295 0.268907563 305 7 1 349 X:2237358-2237517 7 pcx FBtr0344153|FBtr0342766|FBtr0332381 2236594|2236594|2236594 2237961|2238045|2238045 AGACTGA 7mer-A1 dme-miR-14-3p X + 2237398 2237514 3'utr pcx FlyBase G44118.1 AGGATGAGGACGAGGATCAAGTGGAATGACGACATGTAAAGCTCTCACGTTGCCTTAATATATTAGACTGATTTTTTCTACACACATTTGTAGACGTATGGTGGATGACATTTGAGA 142 2237460 0.991576035 18 137 1481 0.97235023 2.02325246 0.02764977 0.366197183 0.585253456 142 5 1 211 X:2237398-2237514 7 194.5 4289 FBgn0003048 2230.713333 22.34666667 34.36666667 0.08719184 8.70375895 5.659553831 2 2 2 0.15 dme-miR-1012-3p 6mer3-8 TTGACT X 22447570 22447575 - X_22447570_22447575_- 0.981240779 0.978520773 0.979880776 0.00192333 CG14615 FBtr0339499 22447181 22447925 X - 22447543 22447583 3'utr CG14615 FlyBase G69539.1 ACGCACTTTTGACTGAATCAAATTTGACATTTTCGAGTTAA 7 22447560 0.775937663 3 6 46 0.9 0.954242509 0.1 0.428571429 0.6 7 1 0 9 X:22447543-22447583 6 CG14615 FBtr0339499 22447181 22447925 TTGACT 6mer3-8 dme-miR-1012-3p X - 22447534 22447589 3'utr CG14615 FlyBase G52298.1 TATATTACGCACTTTTGACTGAATCAAATTTGACATTTTCGAGTTAATTAGCTAAA 16 22447576 0.984620951 5 14 115 0.913043478 1.322219295 0.130434783 0.25 0.47826087 16 2 0 21 X:22447534-22447589 6 9.5 4290 FBgn0031184 46.76333333 3.326666667 5.086666667 0.203150617 2.855711423 1.867627785 -15 1 -7 0.15 dme-miR-33-5p 8mer-A1 CAATGCAA X 22447609 22447616 + X_22447609_22447616_+ 0.591402042 0.616303429 0.603852735 0.017607949 CG14621 FBtr0339557 22446988 22447808 X + 22447562 22447635 3'utr CG14621 FlyBase G63513.1 TTTGATTCAGTCAAAAGTGCGTAATATATGTATATATACCTAGAATGCAATGCAATGCTGTAAATAAAATGTAT 14 22447617 0.890200114 5 12 104 0.928571429 1.113943352 0.214285714 0 0 14 1 0 13 X:22447562-22447635 8 CG14621 FBtr0339557 22446988 22447808 CAATGCAA 8mer-A1 dme-miR-33-5p X + 22447549 22447626 3'utr CG14621 FlyBase G47882.1 CGAAAATGTCAAATTTGATTCAGTCAAAAGTGCGTAATATATGTATATATACCTAGAATGCAATGCAATGCTGTAAAT 13 22447608 0.974828724 7 12 76 1 1.380211242 0.208333333 0.461538462 0.708333333 13 0 0 24 X:22447549-22447626 8 9 4291 FBgn0031183 252.9033333 14.79333333 22.64 0.03558672 0.608382154 0.397526502 -8 1 -3.5 0.15 dme-miR-1007-3p 8mer-A1 TGAGCTTA X 2244821 2244828 + X_2244821_2244828_+ 0.622124848 0.625224249 0.623674548 0.002191607 fs(1)K10 FBtr0070396 2244551 2246041 X + 2244791 2244828 3'utr fs(1)K10 FlyBase G58328.1 TTGTCACACGTTGCTTTTGCGACTGAGAACTGAGCTTA 5 2244814 0.955687275 2 5 41 1 0.698970004 0 0 0 5 0 0 5 X:2244791-2244828 8 fs(1)K10 FBtr0070396 2244551 2246041 TGAGCTTA 8mer-A1 dme-miR-1007-3p X + 2244798 2244832 3'utr fs(1)K10 FlyBase G44119.1 ACGTTGCTTTTGCGACTGAGAACTGAGCTTAGAAC 8 2244812 0.817967302 3 6 45 0.666666667 0.903089987 0 0.375 0.583333333 8 4 0 8 X:2244798-2244832 8 5.5 4292 FBgn0000810 232.2533333 9.176666667 14.05666667 0.023681038 0.599346168 0.391273417 7 9 8 0.15 dme-miR-184-5p 7mer-A1 GATAAGA X 22452192 22452198 - X_22452192_22452198_- 0.782878262 0.782911824 0.782895043 2.37E-05 wap FBtr0309240|FBtr0339498|FBtr0305147|FBtr0077368 22451554|22451443|22451554|22451998 22453229|22453229|22453229|22453229 X - 22452164 22452222 3'utr wap FlyBase G69546.1 AGCAAACAAACTATGATCATTTCAGATAAGACACGACCCTCCATCAATAATCTCAAATC 10 22452209 0.965462633 5 10 53 1 1.079181246 0.083333333 0.2 0.333333333 10 0 0 12 X:22452164-22452222 7 wap FBtr0305147|FBtr0077368|FBtr0309240|FBtr0339498 22451554|22451998|22451554|22451443 22453229|22453229|22453229|22453229 GATAAGA 7mer-A1 dme-miR-184-5p X - 22452164 22452219 3'utr wap FlyBase G52303.1 AAACAAACTATGATCATTTCAGATAAGACACGACCCTCCATCAATAATCTCAAATC 6 22452209 0.973455655 5 6 34 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 X:22452164-22452219 7 5 4293 FBgn0266848 2356.2 87.30666667 134.59 0.002122061 0.057269395 0.037149863 11 11 11 0.15 dme-miR-2a-2-5p 6mer3-8 TGATGA X 22452358 22452363 - X_22452358_22452363_- 0.895568999 0.999715486 0.947642243 0.073642696 wap FBtr0309240|FBtr0339498|FBtr0305147|FBtr0077368 22451554|22451443|22451554|22451998 22453229|22453229|22453229|22453229 X - 22452334 22452419 3'utr wap FlyBase G69548.1 AAAGAAATAAGCGAAATACTTACATAGATTAAAGATTAAAAACCAAACCAGGAAACTGATGACGAACTGCACACAACACAGCTAGA 6 22452360 0.864535792 5 5 19 1 0.77815125 0.166666667 0 0 6 0 0 6 X:22452334-22452419 6 wap FBtr0305147|FBtr0077368|FBtr0309240|FBtr0339498 22451554|22451998|22451554|22451443 22453229|22453229|22453229|22453229 TGATGA 6mer3-8 dme-miR-2a-2-5p X - 22452341 22452370 3'utr wap FlyBase G52305.1 AGGAAACTGATGACGAACTGCACACAACAC 5 22452361 0.750575869 3 5 10 1 1 0 0.4 0.7 5 0 0 10 X:22452341-22452370 6 4 4294 FBgn0266848 2356.2 87.30666667 134.59 0.001697649 0.045815516 0.02971989 -3 -2 -2.5 0.15 dme-miR-282-5p 6mer3-8 AGAGGC X 22452983 22452988 - X_22452983_22452988_- 0.952888816 0.988372308 0.970630562 0.025090623 wap FBtr0309240|FBtr0339498|FBtr0305147|FBtr0077368 22451554|22451443|22451554|22451998 22453229|22453229|22453229|22453229 X - 22452959 22453024 3'utr wap FlyBase G69551.1 CTGTCGAGAGAGAGAAAATGTGAAAGTGACGGATATAGAGGCAGAGAAATGGAAAGAGAAAGGGCT 32 22452989 0.913808049 6 30 85 0.911764706 1.190331698 0.294117647 0.0625 0.117647059 32 2 1 31 X:22452959-22453024 6 wap FBtr0305147|FBtr0077368|FBtr0309240|FBtr0339498 22451554|22451998|22451554|22451443 22453229|22453229|22453229|22453229 AGAGGC 6mer3-8 dme-miR-282-5p X - 22452955 22453028 3'utr wap FlyBase G52308.1 CTGTCTGTCGAGAGAGAGAAAATGTGAAAGTGACGGATATAGAGGCAGAGAAATGGAAAGAGAAAGGGCTTAAA 13 22452989 0.929353033 8 12 41 0.9375 1.176091259 0.375 0.153846154 0.3125 13 1 0 15 X:22452955-22453028 6 13.5 4295 FBgn0266848 2356.2 87.30666667 134.59 0.005729565 0.154627367 0.100304629 1 1 1 0.15 dme-miR-14-3p 6mer3-8 AAGACT X 2245896 2245901 + X_2245896_2245901_+ 0.999795773 0.999950217 0.999872995 0.000109177 fs(1)K10 FBtr0070396 2244551 2246041 X + 2245852 2245917 3'utr fs(1)K10 FlyBase G58331.1 AACCCTCAGGTAGCAAAGTAATTTAATTGCAAATAGAGAGTCCTAAGACTAAATAATATATTTAAA 23 2245894 0.856266736 6 16 146 0.730769231 0.801632346 0 0.130434783 0.230769231 23 5 2 19 X:2245852-2245917 6 fs(1)K10 FBtr0070396 2244551 2246041 AAGACT 6mer3-8 dme-miR-14-3p X + 2245876 2245908 3'utr fs(1)K10 FlyBase G44121.1 AATTGCAAATAGAGAGTCCTAAGACTAAATAAT 11 2245895 0.732514331 3 7 60 0.692307692 0.954242509 0 0.181818182 0.307692308 11 4 0 9 X:2245876-2245908 6 15.5 4296 FBgn0000810 232.2533333 9.176666667 14.05666667 0.066737471 1.689066473 1.10267963 2 1 1.5 0.15 dme-miR-7-5p 6mer3-8 GTCTTC X 22467461 22467466 + X_22467461_22467466_+ 0.895662297 0.794723625 0.845192961 0.071374439 CG14619 FBtr0339508 22466192 22468475 X + 22467407 22467532 3'utr CG14619 FlyBase G63529.1 CGGTAACACCAGCGTCACCTTTGATCCGTTCTGGGATCTGAGTGTACCGTTGCCGTCTTCGTCCCGCTGCAAGCTAGAAGCTTGCCTCGACCTCTTTATCCGCGAAGAGGTCCTTGACGGCGACGA 14 22467464 0.959720941 10 14 71 1 1.255272505 0.277777778 0.285714286 0.444444444 14 0 0 18 X:22467407-22467532 6 CG14619 FBtr0339508 22466192 22468475 GTCTTC 6mer3-8 dme-miR-7-5p X + 22467416 22467481 3'utr CG14619 FlyBase G47889.1 CAGCGTCACCTTTGATCCGTTCTGGGATCTGAGTGTACCGTTGCCGTCTTCGTCCCGCTGCAAGCT 8 22467464 0.97667182 6 7 48 1 1.113943352 0.230769231 0.5 0.692307692 8 0 0 13 X:22467416-22467481 6 5 4297 FBgn0031187 1740.476667 50.81666667 78.19 0.002872776 0.098392916 0.063946796 -3 -3 -3 0.15 dme-miR-932-5p 6mer2-7 GAATTG X 22469100 22469105 + X_22469100_22469105_+ 0.854055509 0.982974892 0.9185152 0.091159782 CG14619 FBtr0339506 22468183 22470146 X + 22469088 22469137 3'utr CG14619 FlyBase G63533.1 AAGCTGAAATCTGAATTGTGAAAACGTACTTATGATAATTGCTAGTAGTA 10 22469103 0.721658443 4 9 64 1 1.113943352 0.230769231 0.3 0.461538462 10 0 0 13 X:22469088-22469137 6 CG14619 FBtr0339506 22468183 22470146 GAATTG 6mer2-7 dme-miR-932-5p X + 22469074 22469149 3'utr CG14619 FlyBase G47891.1 GGGGCCGCGAAGTGAAGCTGAAATCTGAATTGTGAAAACGTACTTATGATAATTGCTAGTAGTACAATTTAAAAAA 9 22469103 0.977015606 4 9 56 1 1.146128036 0.214285714 0.555555556 0.714285714 9 0 0 14 X:22469074-22469149 6 6.5 4298 FBgn0031187 1740.476667 50.81666667 78.19 0.003734609 0.12791079 0.083130835 -3 -3 -3 0.15 dme-miR-980-5p 7mer-A1 AAAAACA X 22474911 22474917 - X_22474911_22474917_- 0.77647108 0.769193187 0.772832133 0.005146252 CG12576 FBtr0077366|FBtr0346429|FBtr0077365|FBtr0335046 22474849|22474849|22474849|22474849 22475730|22475730|22475730|22475730 X - 22474904 22474996 3'utr CG12576 FlyBase G69567.1 TTGTATTCTTATTATTATTTGCGCTTAAAATACATAAGTTATCATTTAAATTGCGAAACAAAACGAAATGTGATTTTGTAAAAACAAAAACTG 95 22474922 0.894943606 13 92 605 0.991869919 2.086359831 0.18699187 0.252631579 0.422764228 95 1 0 122 X:22474904-22474996 7 CG12576 FBtr0335046|FBtr0077365|FBtr0346429|FBtr0077366 22474849|22474849|22474849|22474849 22475730|22475730|22475730|22475730 AAAAACA 7mer-A1 dme-miR-980-5p X - 22474903 22474992 3'utr CG12576 FlyBase G52319.1 ATTCTTATTATTATTTGCGCTTAAAATACATAAGTTATCATTTAAATTGCGAAACAAAACGAAATGTGATTTTGTAAAAACAAAAACTGA 62 22474922 0.964621739 7 60 382 0.989583333 1.977723605 0.15625 0.387096774 0.604166667 62 1 0 95 X:22474903-22474992 7 32.5 4299 FBgn0031190 668.0366667 33.82666667 51.78333333 0.048650024 0.960780449 0.627615063 5 5 5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 2252557 2252562 - X_2252557_2252562_- 0.610759813 0.669158229 0.639959021 0.041293905 CG3091 FBtr0342767|FBtr0342767|FBtr0342767|FBtr0070416|FBtr0070416|FBtr0070416 2252330|2252330|2252330|2252330|2252330|2252330 2252595|2252595|2252595|2252595|2252595|2252595 X - 2252458 2252599 stop_codon CG3091 FlyBase G64359.1 CTGATATCCTGATCATCGAACGTGATATAAACATAAATGTGATCAAGCATCGCGTCTTGCCAAGCGAAGATATCGATTAGTTGGGAAAGTCCCAGAAACACTTACAGGTTCTAGAGCTCAGTGAAGCTGGCCCTCCATTAAG 155 2252572 0.805095617 21 142 867 0.898395722 1.62324929 0.417112299 0.15483871 0.299465241 155 16 3 168 X:2252458-2252599 6 CG3091 FBtr0342767|FBtr0342767|FBtr0342767|FBtr0070416|FBtr0070416|FBtr0070416 2252330|2252330|2252330|2252330|2252330|2252330 2252595|2252595|2252595|2252595|2252595|2252595 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 2252454 2252598 stop_codon CG3091 FlyBase G48507.1 TGATATCCTGATCATCGAACGTGATATAAACATAAATGTGATCAAGCATCGCGTCTTGCCAAGCGAAGATATCGATTAGTTGGGAAAGTCCCAGAAACACTTACAGGTTCTAGAGCTCAGTGAAGCTGGCCCTCCATTAAGAATT 108 2252572 0.793880636 18 92 597 0.853333333 1.329058719 0.44 0.314814815 0.506666667 108 17 5 128 X:2252454-2252598 6 90 4300 FBgn0029608 227.6666667 23.33 35.96333333 0.395314788 3.857693956 2.502548892 10 10 10 0.15 dme-miR-283-5p 8mer-A1 TGATATTA X 2264611 2264618 + X_2264611_2264618_+ 0.402085047 0.557951421 0.480018234 0.110214188 CG3071 FBtr0070398 2264570 2264825 X + 2264585 2264645 3'utr CG3071 FlyBase G58340.1 AGAACAACGATATAGCCACATAGCTTTGATATTAAGTATATAAGTAGTAGTAGTTTAAGTA 12 2264597 0.880785553 5 10 93 0.8 0.602059991 0 0.25 0.4 12 1 2 12 X:2264585-2264645 8 CG3071 FBtr0070398 2264570 2264825 TGATATTA 8mer-A1 dme-miR-283-5p X + 2264579 2264621 3'utr CG3071 FlyBase G44124.1 CGACGTAGAACAACGATATAGCCACATAGCTTTGATATTAAGT 6 2264609 0.971427869 3 6 35 1 0.954242509 0 0.5 0.666666667 6 0 0 9 X:2264579-2264621 8 7.5 4301 FBgn0023527 429.3266667 27.48 42.32666667 0.017469215 0.272925764 0.177193259 14 2 8 0.15 dme-miR-34-5p 7mer-m8 CACTGCC X 2265654 2265660 - X_2265654_2265660_- 0.705094292 0.707328261 0.706211276 0.001579677 CG2924 FBtr0345315|FBtr0346648|FBtr0070412|FBtr0300793 2264989|2264655|2264989|2264989 2265784|2265784|2265784|2265784 X - 2265639 2265711 3'utr CG2924 FlyBase G64367.1 CACACCGCCAAAATTAGCCTGTCCACATCCGCCAAGCACACATCCCGCACTCACTGCCGGCTTGATCTGATAT 13 2265661 0.945534193 3 13 55 1 1.146128036 0 0.076923077 0.142857143 13 0 0 14 X:2265639-2265711 7 CG2924 FBtr0070412|FBtr0300793|FBtr0345315|FBtr0346648 2264989|2264989|2264989|2264655 2265784|2265784|2265784|2265784 CACTGCC 7mer-m8 dme-miR-34-5p X - 2265642 2265674 3'utr CG2924 FlyBase G48513.1 ACACATCCCGCACTCACTGCCGGCTTGATCTGA 6 2265661 0.851107621 2 5 28 0.666666667 0.77815125 0 0.333333333 0.555555556 6 3 0 6 X:2265642-2265674 7 7 4302 FBgn0023528 1233.12 56.31666667 86.87 0.005676658 0.124297129 0.080580177 1 1 1 0.15 dme-bantam-3p 6mer3-8 TGATCT X 2271138 2271143 - X_2271138_2271143_- 0.969533609 0.968494909 0.969014259 0.000734472 CG2918 FBtr0300792 2271006 2271490 X - 2271120 2271236 3'utr CG2918 FlyBase G64374.1 ATTTTCCATTTCCATACCATTCCGCATAGGAAATACAAGACTTGAAGAAGTACTCACACGGTCCCCTCTATATGTATATCCACTATATCTTATTGATCTATTGTAGCGAAAGTAGCG 60 2271143 0.877547231 14 54 437 0.916666667 1.51851394 0.069444444 0.116666667 0.263888889 60 5 1 66 X:2271120-2271236 6 CG2918 FBtr0300792 2271006 2271490 TGATCT 6mer3-8 dme-bantam-3p X - 2271081 2271165 3'utr CG2918 FlyBase G48517.1 ATGTATATCCACTATATCTTATTGATCTATTGTAGCGAAAGTAGCGAAACGAATTGGGCGGGATGAGTTAATTGCCGAGATAAGA 29 2271143 0.992766432 6 24 271 0.871794872 0.832508913 0.025641026 0.24137931 0.435897436 29 1 4 34 X:2271081-2271165 6 26.5 4303 FBgn0023529 3854.556667 145.7 223.8466667 0.00687498 0.181880577 0.118384609 0 0 0 0.15 dme-miR-14-3p 6mer3-8 AAGACT X 2271195 2271200 - X_2271195_2271200_- 0.462466305 0.849761301 0.656113803 0.273858921 CG2918 FBtr0300792 2271006 2271490 X - 2271120 2271236 3'utr CG2918 FlyBase G64374.1 ATTTTCCATTTCCATACCATTCCGCATAGGAAATACAAGACTTGAAGAAGTACTCACACGGTCCCCTCTATATGTATATCCACTATATCTTATTGATCTATTGTAGCGAAAGTAGCG 60 2271203 0.877547231 14 54 437 0.916666667 1.51851394 0.069444444 0.116666667 0.263888889 60 5 1 66 X:2271120-2271236 6 CG2918 FBtr0300792 2271006 2271490 AAGACT 6mer3-8 dme-miR-14-3p X - 2271188 2271236 3'utr CG2918 FlyBase G48518.1 ATTTTCCATTTCCATACCATTCCGCATAGGAAATACAAGACTTGAAGAA 15 2271203 0.949128135 4 12 55 0.826086957 1.278753601 0.043478261 0.466666667 0.652173913 15 4 0 19 X:2271188-2271236 6 17.5 4304 FBgn0023529 3854.556667 145.7 223.8466667 0.004540081 0.120109815 0.078178515 3 3 3 0.15 dme-miR-190-5p 6mer3-8 ACATAT X 2279564 2279569 - X_2279564_2279569_- 0.581722869 0.999991217 0.790857043 0.295760351 CG2865 FBtr0332962 2278029 2281577 X - 2279520 2279587 3'utr CG2865 FlyBase G64390.1 ATTATAGTTTATATTCCTACATATGCAGACTACATGGATGAACCAATATACCAATATACATTATACAT 34 2279564 0.863360146 6 32 227 0.945945946 1.544068044 0.027027027 0.088235294 0.162162162 34 2 0 35 X:2279520-2279587 6 CG2865 FBtr0332962 2278029 2281577 ACATAT 6mer3-8 dme-miR-190-5p X - 2279542 2279582 3'utr CG2865 FlyBase G48529.1 AGTTTATATTCCTACATATGCAGACTACATGGATGAACCAA 14 2279564 0.676101321 5 12 64 0.875 0.84509804 0.083333333 0.428571429 0.666666667 14 1 2 21 X:2279542-2279582 6 20.5 4305 FBgn0023526 330.04 10.34 15.85333333 0.062113683 1.982591876 1.293103448 -5 -5 -5 0.15 dme-miR-1008-3p 7mer-A1 GCTGTGA X 2280400 2280406 - X_2280400_2280406_- 0.612291484 0.698837151 0.655564317 0.061197051 CG2865 FBtr0332962 2278029 2281577 X - 2280371 2280432 3'utr CG2865 FlyBase G64396.2 AAATTTTTTCTTCGAAAAAAATTACGGCTGTGATAGAATTTTAAGTTTTTGGCTAAACAAAA 196 2280410 0.776511659 16 157 1700 0.814814815 1.291270158 0.268518519 0.102040816 0.185185185 196 32 8 176 X:2280371-2280432 7 CG2865 FBtr0332962 2278029 2281577 GCTGTGA 7mer-A1 dme-miR-1008-3p X - 2280364 2280429 3'utr CG2865 FlyBase G48532.1 TTTTTTCTTCGAAAAAAATTACGGCTGTGATAGAATTTTAAGTTTTTGGCTAAACAAAAAAAGAAG 158 2280411 0.989003778 15 135 1352 0.882629108 1.672097858 0.248826291 0.259493671 0.450704225 158 22 3 188 X:2280364-2280429 7 173.5 4306 FBgn0023526 330.04 10.34 15.85333333 0.525693855 16.7794971 10.94407065 4 5 4.5 0.15 dme-miR-33-5p 8mer-A1 CAATGCAA X 2280802 2280809 - X_2280802_2280809_- 0.634534511 0.634475334 0.634504923 4.19E-05 CG2865 FBtr0332962 2278029 2281577 X - 2280789 2280827 3'utr CG2865 FlyBase G64400.1 AAACAAAAAAAAAACAAACAATGCAAGGTTTCATTTATT 50 2280806 0.922489444 3 49 172 1 1.785329835 0 0.1 0.262295082 50 0 0 61 X:2280789-2280827 8 CG2865 FBtr0332962 2278029 2281577 CAATGCAA 8mer-A1 dme-miR-33-5p X - 2280790 2280826 3'utr CG2865 FlyBase G48534.1 AACAAAAAAAAAACAAACAATGCAAGGTTTCATTTAT 30 2280806 0.915976108 2 29 98 0.976744186 1.62324929 0 0.333333333 0.534883721 30 1 0 42 X:2280790-2280826 8 39.5 4307 FBgn0023526 330.04 10.34 15.85333333 0.119682463 3.820116054 2.491589571 -3 -3 -3 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA X 2280908 2280914 - X_2280908_2280914_- 0.823332499 0.820839555 0.822086027 0.001762746 CG2865 FBtr0332962 2278029 2281577 X - 2280899 2280932 3'utr CG2865 FlyBase G64401.1 AAAACCTCCGAAGTTCTCCTAGTCATACAAAAAA 7 2280916 0.624495836 4 7 38 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 X:2280899-2280932 7 CG2865 FBtr0332962 2278029 2281577 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X - 2280902 2280929 3'utr CG2865 FlyBase G48535.1 ACCTCCGAAGTTCTCCTAGTCATACAAA 5 2280907 0.92735952 2 5 27 1 0.903089987 0.25 0.4 0.625 5 0 0 8 X:2280902-2280929 7 6 4308 FBgn0023526 330.04 10.34 15.85333333 0.018179615 0.580270793 0.378469302 2 -7 -2.5 0.15 dme-miR-305-5p 7mer-A1 GTACAAA X 2281375 2281381 - X_2281375_2281381_- 0.782397071 0.782309386 0.782353228 6.20E-05 CG2865 FBtr0332962 2278029 2281577 X - 2281340 2281456 3'utr CG2865 FlyBase G64402.1 ATTATTATATAGGAAGGAGCAGGAAGATGATCGGGCGGATTGGCCAGTATTACTCATTAATGGCAGTCGCGATTTGTACAAACAAAAATACACAAAAAATTAGTTGTAGGCAATTGA 92 2281383 0.968749913 18 86 476 0.940594059 1.375663614 0.188118812 0.086956522 0.168316832 92 3 3 95 X:2281340-2281456 7 CG2865 FBtr0332962 2278029 2281577 GTACAAA 7mer-A1 dme-miR-305-5p X - 2281346 2281499 3'utr CG2865 FlyBase G48537.1 AAGCGAACATTTAGGCTATGACCCATATGCTAATCTCTAAGCTATTATTATATAGGAAGGAGCAGGAAGATGATCGGGCGGATTGGCCAGTATTACTCATTAATGGCAGTCGCGATTTGTACAAACAAAAATACACAAAAAATTAGTTGTAGGC 70 2281383 0.957083362 14 68 329 0.98245614 1.748188027 0.228070175 0.428571429 0.649122807 70 1 1 112 X:2281346-2281499 7 51 4309 FBgn0023526 330.04 10.34 15.85333333 0.154526724 4.932301741 3.216989066 2 2 2 0.15 dme-miR-277-3p 6mer2-7 GCATTT X 22826469 22826474 - X_22826469_22826474_- 0.999991497 0.999357352 0.999674424 0.000448376 fog FBtr0333180|FBtr0100538|FBtr0333179|FBtr0077342|FBtr0333182|FBtr0333181 22826160|22826160|22826160|22826160|22824315|22826160 22827046|22827046|22827046|22827046|22827046|22827046 X - 22826458 22826505 3'utr fog FlyBase G69600.2 AACTCATATATTCATTGTGCGTACAGTCTGAGCATTTGTTGTATATAC 31 22826485 0.75052404 9 25 213 0.897435897 1.544068044 0.179487179 0.258064516 0.41025641 31 4 0 35 X:22826458-22826505 6 fog FBtr0333182|FBtr0333181|FBtr0333179|FBtr0077342|FBtr0333180|FBtr0100538 22824315|22826160|22826160|22826160|22826160|22826160 22827046|22827046|22827046|22827046|22827046|22827046 GCATTT 6mer2-7 dme-miR-277-3p X - 22826449 22826525 3'utr fog FlyBase G52343.1 ACTACTATTATTACCATTGTAACTCATATATTCATTGTGCGTACAGTCTGAGCATTTGTTGTATATACATTAGTGAA 21 22826485 0.776502947 11 20 164 0.962962963 1.414973348 0.185185185 0.238095238 0.407407407 21 1 0 26 X:22826449-22826525 6 21 4310 FBgn0000719 1767.816667 49.34333333 75.43666667 0.01187906 0.425589408 0.278379214 11 11 11 0.15 dme-miR-308-3p 7mer-m1 TGTGATT X 22826605 22826611 - X_22826605_22826611_- 0.511702734 0.510597667 0.5111502 0.000781353 fog FBtr0333180|FBtr0100538|FBtr0333179|FBtr0077342|FBtr0333182|FBtr0333181 22826160|22826160|22826160|22826160|22824315|22826160 22827046|22827046|22827046|22827046|22827046|22827046 X - 22826565 22826674 3'utr fog FlyBase G69601.2 ACATTACAATAGTTTTATATGTGAGCGCTGCTGTCGCTGTTGCGAGCCTTAGCAATATTTCATTGTGATTACTTAGGCATATGAATTGATCGTTAGACTTAGGAAATCTT 402 22826612 0.878730335 28 349 4105 0.877083333 1.177124064 0.0625 0.167082294 0.304166667 401 32 27 421 X:22826565-22826674 7 fog FBtr0333182|FBtr0333181|FBtr0333179|FBtr0077342|FBtr0333180|FBtr0100538 22824315|22826160|22826160|22826160|22826160|22826160 22827046|22827046|22827046|22827046|22827046|22827046 TGTGATT 7mer-m1 dme-miR-308-3p X - 22826530 22826671 3'utr fog FlyBase G52344.1 TTACAATAGTTTTATATGTGAGCGCTGCTGTCGCTGTTGCGAGCCTTAGCAATATTTCATTGTGATTACTTAGGCATATGAATTGATCGTTAGACTTAGGAAATCTTATTTGTATATCCAGAATCTTTTGATGTATCTTTTT 235 22826612 0.744487624 30 212 2291 0.904494382 1.604765885 0.084269663 0.395744681 0.601123596 235 27 7 322 X:22826530-22826671 7 253 4311 FBgn0000719 1767.816667 49.34333333 75.43666667 0.143114388 5.127339053 3.353806725 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 23012360 23012366 - X_23012360_23012366_- 0.799926534 0.800331501 0.800129017 0.000286378 Rab21 FBtr0299903|FBtr0299903|FBtr0299903|FBtr0336924|FBtr0336924|FBtr0336924|FBtr0111134|FBtr0111134|FBtr0111134 23012138|23012138|23012138|23012138|23012138|23012138|23012138|23012138|23012138 23012376|23012376|23012376|23012376|23012376|23012376|23012376|23012376|23012376 X - 23012343 23012415 stop_codon Rab21 FlyBase G69625.1 GGAGATCCTGCGGGCCAGCGGTCCTGTTGCGGCATTTAGCCGTTCCCATTGTGATAGTAATCATAACTATAAA 97 23012367 0.740996206 12 90 684 0.919354839 1.278753601 0.088709677 0.237113402 0.403225806 97 5 5 114 X:23012343-23012415 7 Rab21 FBtr0111134|FBtr0111134|FBtr0111134|FBtr0336924|FBtr0336924|FBtr0336924|FBtr0299903|FBtr0299903|FBtr0299903 23012138|23012138|23012138|23012138|23012138|23012138|23012138|23012138|23012138 23012376|23012376|23012376|23012376|23012376|23012376|23012376|23012376|23012376 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 23012292 23012416 stop_codon Rab21 FlyBase G52364.1 CGGAGATCCTGCGGGCCAGCGGTCCTGTTGCGGCATTTAGCCGTTCCCATTGTGATAGTAATCATAACTATAAAATAGTAGACCTTTAACCGATGTTGATCTTGTGTATATATTATACATAGATA 94 23012367 0.977557566 19 89 737 0.961538462 1.397940009 0.084615385 0.319148936 0.507692308 94 1 4 125 X:23012292-23012416 7 69 4312 FBgn0039966 49 5.726666667 8.77 1.408163265 12.04889406 7.867730901 1 1 1 0.15 dme-bantam-3p 8mer-A1 TGATCTCA X 23080962 23080969 - X_23080962_23080969_- 0.63113521 0.631134353 0.631134781 5.66E-07 CG17163 FBtr0113727|FBtr0309316 23080869|23080757 23081631|23081631 X - 23080920 23081098 3'utr CG17163 FlyBase G69629.1 CTTATATATTTACAAATGTACTTATATATCTTTAAGATAAATAGTGTACACGCCTAGATACACTCCAATTAATTAACTTTGGGTATCGTTCTACGAATTTTGCATACTGGATGTGTATTAAGGTGTATTTGATCTCATTCAATGATATTATTTGTGATGTAACAACTTCAAGGTAATTT 191 23080970 0.991529555 25 180 1950 0.941176471 1.84094208 0.113122172 0.109947644 0.230769231 191 11 2 208 X:23080920-23081098 8 CG17163 FBtr0309316|FBtr0113727 23080757|23080869 23081631|23081631 TGATCTCA 8mer-A1 dme-bantam-3p X - 23080899 23080998 3'utr CG17163 FlyBase G52367.1 TGCATACTGGATGTGTATTAAGGTGTATTTGATCTCATTCAATGATATTATTTGTGATGTAACAACTTCAAGGTAATTTCAATTATTCCCCTAAATGAAA 103 23080970 0.992618809 18 100 1158 0.979452055 2.155336037 0.123287671 0.359223301 0.547945205 103 3 0 143 X:23080899-23080998 8 100.5 4313 FBgn0039942 110.9 8.843333333 13.50666667 0.906221821 11.36449303 7.44076999 1 1 1 0.15 dme-bantam-3p 6mer3-8 TGATCT X 23086405 23086410 - X_23086405_23086410_- 0.974358782 0.679944668 0.827151725 0.208182207 CG17159 FBtr0113717|FBtr0302542 23085729|23084958 23089410|23089410 X - 23086309 23086454 3'utr CG17159 FlyBase G69634.1 ACTTTTCATAGCATTTGGTAGTTGTTAATAGAAATGACATTTGTTGATCTTAACTATACCTGTTACTCTTAGATTAAAAGGTTATACCAAAATCGTTGGAACTATGTATTAGTCAAAAGAAAACGTTGTCGAATAGTAAAGTAAAA 29 23086412 0.991444339 15 26 274 0.911764706 1.491361694 0.205882353 0.172413793 0.294117647 29 3 0 31 X:23086309-23086454 6 CG17159 FBtr0302542|FBtr0113717 23084958|23085729 23089410|23089410 TGATCT 6mer3-8 dme-bantam-3p X - 23086380 23086452 3'utr CG17159 FlyBase G52373.1 TTTTCATAGCATTTGGTAGTTGTTAATAGAAATGACATTTGTTGATCTTAACTATACCTGTTACTCTTAGATT 15 23086410 0.739126445 8 14 149 0.935483871 1.462397998 0.258064516 0.666666667 0.838709677 15 2 0 29 X:23086380-23086452 6 16.5 4314 FBgn0039945 285.31 7.496666667 11.39666667 0.057831832 2.200978213 1.447791752 2 0 1 0.15 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG X 2343442 2343448 + X_2343442_2343448_+ 0.701549488 0.701520154 0.701534821 2.07E-05 phl FBtr0344007|FBtr0070401 2343430|2343430 2343870|2343870 X + 2343419 2343493 stop_codon phl FlyBase G58350.1 TGGGAATATCTAGACAGCGACCTGTACCTGTACTTACATATATCCTGCGTGATCAACGTGATCCTACATCTATAT 197 2343441 0.908237134 10 190 1127 0.96812749 2.084576278 0.011952191 0.208121827 0.378486056 197 7 1 243 X:2343419-2343493 7 phl FBtr0344007|FBtr0070401 2343430|2343430 2343870|2343870 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" X + 2343425 2343471 stop_codon phl FlyBase G44131.1 TATCTAGACAGCGACCTGTACCTGTACTTACATATATCCTGCGTGAT 130 2343441 0.905856282 6 126 716 0.961352657 2.298853076 0 0.415384615 0.632850242 130 8 0 199 X:2343425-2343471 7 160 4315 FBgn0003079 445.6666667 16.59666667 25.57666667 0.359012715 9.640490058 6.255701812 1 1 1 0.15 dme-miR-14-3p 6mer3-8 AAGACT X 2444528 2444533 - X_2444528_2444533_- 0.999968244 0.999970175 0.99996921 1.41E-06 boi FBtr0070457|FBtr0334883|FBtr0303887|FBtr0303886|FBtr0070458 2444165|2444165|2444165|2444165|2444165 2445050|2445050|2445050|2445050|2445050 X - 2444477 2444607 3'utr boi FlyBase G64423.1 TGCTGCTTCGTTTTGTTTTAGTTAAATATTGAATTTGAAAATATACAAACTTTAGTATAAGGAATTGGTAATGTAAGACTTTTTTCGTTGCTGCCGGCCAGATAGTCAGTAGAATTACTAATGTTAAGTTT 137 2444536 0.990803267 24 129 1338 0.933333333 2.187520721 0.2 0.145985401 0.290909091 137 11 0 154 X:2444477-2444607 6 boi FBtr0303886|FBtr0070458|FBtr0334883|FBtr0303887|FBtr0070457 2444165|2444165|2444165|2444165|2444165 2445050|2445050|2445050|2445050|2445050 AAGACT 6mer3-8 dme-miR-14-3p X - 2444434 2444577 3'utr boi FlyBase G48554.1 GAATTTGAAAATATACAAACTTTAGTATAAGGAATTGGTAATGTAAGACTTTTTTCGTTGCTGCCGGCCAGATAGTCAGTAGAATTACTAATGTTAAGTTTTTTTTTTTATTATTGATAGAACTATTTCGGGGGCCAAATTTTA 109 2444536 0.790149557 19 98 988 0.917721519 1.860338007 0.208860759 0.348623853 0.550632911 109 12 1 145 X:2444434-2444577 6 93 4316 FBgn0040388 902.53 28.22 43.69666667 0.103043666 3.295535082 2.128308795 3 3 3 0.15 dme-miR-1007-3p 6mer3-8 TGAGCT X 2444683 2444688 - X_2444683_2444688_- 0.999409317 0.999273928 0.999341623 9.57E-05 boi FBtr0070457|FBtr0334883|FBtr0303887|FBtr0303886|FBtr0070458 2444165|2444165|2444165|2444165|2444165 2445050|2445050|2445050|2445050|2445050 X - 2444661 2444707 3'utr boi FlyBase G64424.1 TCAAGTTTTGTTTTCATTTTGAGCTCATTAAAATGTATTTCGAGCAG 99 2444689 0.790743353 6 99 1251 1 2.041392685 0.154545455 0.090909091 0.181818182 99 0 0 110 X:2444661-2444707 6 boi FBtr0303886|FBtr0070458|FBtr0334883|FBtr0303887|FBtr0070457 2444165|2444165|2444165|2444165|2444165 2445050|2445050|2445050|2445050|2445050 TGAGCT 6mer3-8 dme-miR-1007-3p X - 2444667 2444705 3'utr boi FlyBase G48555.1 AAGTTTTGTTTTCATTTTGAGCTCATTAAAATGTATTTC 49 2444689 0.792873835 4 47 599 0.966666667 1.763427994 0.25 0.183673469 0.333333333 49 2 0 58 X:2444667-2444705 6 74 4317 FBgn0040388 902.53 28.22 43.69666667 0.081991734 2.622253721 1.69349302 1 1 1 0.15 dme-miR-79-3p 8mer-A1 TAGCTTTA X 2444846 2444853 - X_2444846_2444853_- 0.624807732 0.624365344 0.624586538 0.000312824 boi FBtr0070457|FBtr0334883|FBtr0303887|FBtr0303886|FBtr0070458 2444165|2444165|2444165|2444165|2444165 2445050|2445050|2445050|2445050|2445050 X - 2444808 2444875 3'utr boi FlyBase G64425.2 GCAGCTCGAAACCCTCGAATATTAGCTTTAAGGCACCCGGTACTGTTTAGTTTTCCAAAAAACCAATT 132 2444854 0.699320215 12 123 872 0.952702703 2.149219113 0.114864865 0.098484848 0.195945946 132 7 0 141 X:2444808-2444875 8 boi FBtr0303886|FBtr0070458|FBtr0334883|FBtr0303887|FBtr0070457 2444165|2444165|2444165|2444165|2444165 2445050|2445050|2445050|2445050|2445050 TAGCTTTA 8mer-A1 dme-miR-79-3p X - 2444737 2445082 stop_codon boi FlyBase G48556.1 CGTCGGGCAGTCTGAACAGTATTGAGGTGTGATGGCTCGCAGAGGAGGCAACTAACTAGTGGACTAGTGGGCGGAGCAGCACAACGAGGAGAAATATACCTAAGCGGCAAGCGAAAGTGGTTCCCCAAAAACAGACAGTTTCAAGTAGACTTAAGGATCCGAAACTAGATGTGTATTATTGAGATAATCGTAGGACAGGTCGGCAGAGCAGCTCGAAACCCTCGAATATTAGCTTTAAGGCACCCGGTACTGTTTAGTTTTCCAAAAAACCAATTAATTTGGCCAATCATTAAGCTTAGAACTAGGGAATTTGCCATTAACAGAAGTTTCTGTCGTTTCAAATGCT 176 2444854 0.971450702 42 168 956 0.966292135 2.411619706 0.183520599 0.380681818 0.5917603 176 9 0 258 X:2444737-2445082 8 80.5 4318 FBgn0040388 902.53 28.22 43.69666667 0.089193711 2.852586818 1.842245785 1 1 1 0.15 dme-miR-34-5p 7mer-A1 ACTGCCA X 253453 253459 + X_253453_253459_+ 0.731095401 0.674662661 0.702879031 0.039903945 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 X + 253422 253480 3'utr G9a FlyBase G57695.1 TCGAAGCCCGGTCGGCTTTCTTTCTTTTTTGACTGCCAAATGTTTCGTGGTTAACCACT 25 253450 0.936675989 8 23 248 0.935483871 1.462397998 0.193548387 0.24 0.387096774 25 2 0 29 X:253422-253480 7 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 ACTGCCA 7mer-A1 dme-miR-34-5p X + 253425 253472 3'utr G9a FlyBase G43659.1 AAGCCCGGTCGGCTTTCTTTCTTTTTTGACTGCCAAATGTTTCGTGGT 14 253450 0.70470411 5 14 157 1 1.146128036 0.428571429 0 0 14 0 0 14 X:253425-253472 7 17.5 4319 FBgn0040372 792.6533333 13.78666667 21.11333333 0.022077747 1.26934236 0.82886012 3 3 3 0.15 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG X 253581 253587 + X_253581_253587_+ 0.670827815 0.632858338 0.651843076 0.026848491 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 X + 253537 253598 3'utr G9a FlyBase G57696.1 TTGTATTAATGTTTTACGCCTTATTAATAATGTTTTTATTCTTAGTACCTGTAAAAACAAAT 9 253588 0.982593782 5 9 72 1 1 0 0.111111111 0.2 9 0 0 10 X:253537-253598 7 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" X + 253565 253609 3'utr G9a FlyBase G43660.1 AATGTTTTTATTCTTAGTACCTGTAAAAACAAATTAGTTTATACT 6 253587 0.985584871 4 5 49 0.714285714 0.698970004 0 0.166666667 0.285714286 6 2 0 5 X:253565-253609 7 6.5 4320 FBgn0040372 792.6533333 13.78666667 21.11333333 0.008200306 0.471470019 0.30786233 -7 -6 -6.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 253766 253773 + X_253766_253773_+ 0.630948138 0.631128796 0.631038467 0.000127774 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 X + 253730 253787 3'utr G9a FlyBase G57698.1 CAGGCATAAAATAGAATTGTAATGGAGGAAAGACCATCTAGTCATAAGAATGAAGGAG 50 253766 0.936809497 6 48 185 0.967741935 1.477121255 0.338709677 0.22 0.370967742 50 1 1 60 X:253730-253787 8 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X + 253742 253793 3'utr G9a FlyBase G43662.1 AGAATTGTAATGGAGGAAAGACCATCTAGTCATAAGAATGAAGGAGACAAAG 25 253766 0.913735943 5 25 98 1 1.62324929 0.428571429 0.52 0.714285714 25 0 0 42 X:253742-253793 8 37 4321 FBgn0040372 792.6533333 13.78666667 21.11333333 0.046678666 2.683752418 1.752447111 0 0 0 0.15 dme-miR-190-5p 6mer3-8 ACATAT X 253877 253882 + X_253877_253882_+ 0.868204655 0.999705781 0.933955218 0.09298532 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 X + 253858 253968 3'utr G9a FlyBase G57699.1 TGTATGAGCTCTGGAGCATACATATGTAAATACGTGATACGAAAAAGTAATACGTTTGATTTTACCGTTAACCATGAAAATTAGACCGTTTAAATTGACCTGTAATGGGCA 11 253881 0.987485934 9 9 70 0.923076923 1.079181246 0.230769231 0.181818182 0.307692308 11 1 0 12 X:253858-253968 6 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 ACATAT 6mer3-8 dme-miR-190-5p X + 253870 253899 3'utr G9a FlyBase G43663.1 GGAGCATACATATGTAAATACGTGATACGA 5 253881 0.631984841 3 3 19 0.8 0.602059991 0 0.25 0.4 4 1 0 4 X:253870-253899 6 4 4322 FBgn0040372 792.6533333 13.78666667 21.11333333 0.005046342 0.290135397 0.189453742 -4 -4 -4 0.15 dme-miR-304-5p 8mer-A1 TGAGATTA X 2583759 2583766 - X_2583759_2583766_- 0.625362825 0.62511336 0.625238093 0.000176352 CG13760 FBtr0308567|FBtr0300707 2583743|2583743 2584291|2584291 X - 2583741 2583776 3'utr CG13760 FlyBase G64452.1 AGAAAATAAATGAGATTATTGTTCCAAATGTGAGCC 6 2583766 0.969312862 2 6 36 1 0.903089987 0.25 0.166666667 0.375 6 0 0 8 X:2583741-2583776 8 CG13760 FBtr0300707|FBtr0308567 2583743|2583743 2584291|2584291 TGAGATTA 8mer-A1 dme-miR-304-5p X - 2583751 2583786 3'utr CG13760 FlyBase G48573.1 ATGTATATGTAGAAAATAAATGAGATTATTGTTCCA 8 2583766 0.892965065 2 8 67 1 1.113943352 0.076923077 0.375 0.615384615 8 0 0 13 X:2583751-2583786 8 7 4323 FBgn0040375 102.9966667 8.843333333 13.49 0.067963365 0.791556728 0.518902891 0 0 0 0.15 dme-miR-283-5p 8mer-A1 TGATATTA X 2584160 2584167 - X_2584160_2584167_- 0.344285789 0.416481951 0.38038387 0.051050423 CG13760 FBtr0308567|FBtr0300707 2583743|2583743 2584291|2584291 X - 2584114 2584254 3'utr CG13760 FlyBase G64453.1 CAGATGAATTGATGAACAGATGAACAGAAGTACCTGCCGTCGCCAGGTTGCCAGGTGATGAGAACGGATGATTGGAATCTGCGCTTGTGATATTAGGACTTTAGGAGGAGACCTTGTAGGGGGGGACTTCGAGTGGGAGGT 257 2584171 0.986532939 24 233 1991 0.9 1.638489257 0.306896552 0.120622568 0.220689655 257 24 5 261 X:2584114-2584254 8 CG13760 FBtr0300707|FBtr0308567 2583743|2583743 2584291|2584291 TGATATTA 8mer-A1 dme-miR-283-5p X - 2584119 2584268 3'utr CG13760 FlyBase G48574.1 GATGAACAAATGAACAGATGAATTGATGAACAGATGAACAGAAGTACCTGCCGTCGCCAGGTTGCCAGGTGATGAGAACGGATGATTGGAATCTGCGCTTGTGATATTAGGACTTTAGGAGGAGACCTTGTAGGGGGGGACTTCGAGTGG 241 2584171 0.985010102 27 220 1786 0.924637681 1.901730692 0.31884058 0.315352697 0.52173913 241 23 3 319 X:2584119-2584268 8 171.5 4324 FBgn0040375 102.9966667 8.843333333 13.49 1.66510243 19.39313984 12.71312083 4 4 4 0.15 dme-bantam-3p 6mer3-8 TGATCT X 2588033 2588038 + X_2588033_2588038_+ 0.995344556 0.994566379 0.994955467 0.00055027 wds FBtr0308566 2587628 2588217 X + 2587936 2588067 3'utr wds FlyBase G58370.1 ATTAGCCTATTGTATTGGCCCACCATGCAAGCGAGAATATTCCCCCAAAATTGTTTGTAACCTTTGACACAGCCACGCAAACCAACATAACTTATAATGATCTTTCGGTGACGAGAAAACTAAATTTAAGCG 184 2588033 0.986420856 14 179 1531 0.976525822 2.318063335 0.34741784 0.114130435 0.234741784 184 5 0 208 X:2587936-2588067 6 wds FBtr0308566 2587628 2588217 TGATCT 6mer3-8 dme-bantam-3p X + 2588015 2588066 3'utr wds FlyBase G44142.1 AACCAACATAACTTATAATGATCTTTCGGTGACGAGAAAACTAAATTTAAGC 91 2588033 0.768524075 7 87 756 0.95862069 1.841984805 0.427586207 0.417582418 0.634482759 91 5 1 139 X:2588015-2588066 6 133 4325 FBgn0040066 310 19.74666667 30.31666667 0.429032258 6.735313977 4.387025838 0 0 0 0.15 dme-miR-14-3p 6mer3-8 AAGACT X 2606789 2606794 + X_2606789_2606794_+ 0.999983347 0.922131265 0.961057306 0.055049677 Zw10 FBtr0070441 2606528 2606824 X + 2606763 2606811 3'utr Zw10 FlyBase G58405.1 CCGCAACGCAACACAATATTTAACTTAAGACTTATTTAAATGAATAAAA 14 2606797 0.988322601 6 14 130 1 1.204119983 0.0625 0.142857143 0.25 14 0 0 16 X:2606763-2606811 6 Zw10 FBtr0070441 2606528 2606824 AAGACT 6mer3-8 dme-miR-14-3p X + 2606777 2606812 3'utr Zw10 FlyBase G44173.1 AATATTTAACTTAAGACTTATTTAAATGAATAAAAA 8 2606798 0.702054497 3 7 71 0.909090909 1 0 0.25 0.454545455 8 1 0 10 X:2606777-2606812 6 10.5 4326 FBgn0004643 521.4966667 24.47 37.23 0.020134357 0.429096853 0.28203062 -8 -9 -8.5 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA X 2617896 2617903 - X_2617896_2617903_- 0.624582331 0.623886526 0.624234428 0.000492005 Tsp3A FBtr0307159 2617756 2618435 X - 2617882 2617920 3'utr Tsp3A FlyBase G64495.1 TACTCGCTGAAATTCGATGCATTTATTTATATGTAATTC 20 2617904 0.788522122 6 17 203 0.869565217 1.301029996 0.47826087 0.15 0.260869565 20 3 0 20 X:2617882-2617920 8 Tsp3A FBtr0307159 2617756 2618435 TGCATTTA 8mer-A1 dme-miR-277-3p X - 2617822 2617920 3'utr Tsp3A FlyBase G48605.1 TACTCGCTGAAATTCGATGCATTTATTTATATGTAATTCCTTCGAAAAAAAAGCAACAAACAGTGCGCACAAATCTTGAATATCTATTCATCCAGAACC 30 2617904 0.978834267 11 24 220 0.80952381 0.929418926 0.285714286 0.333333333 0.523809524 30 5 3 34 X:2617822-2617920 8 17 4327 FBgn0040334 330.6633333 22.46333333 34.46666667 0.051411809 0.756788841 0.493230174 1 1 1 0.15 dme-miR-34-5p 6mer2-7 ACTGCC X 2618037 2618042 - X_2618037_2618042_- 0.99991152 0.99978665 0.999849085 8.82E-05 Tsp3A FBtr0307159 2617756 2618435 X - 2618021 2618104 3'utr Tsp3A FlyBase G64497.1 TACTTGCATGTTTTGTGCGAGGTGTGTGTATTTTCAATTCCATATTACTTATGTTGTAATCGACTGCCTGGATAGCTGTATATA 26 2618036 0.817471291 10 25 216 0.96875 1.491361694 0.25 0.192307692 0.34375 26 1 0 31 X:2618021-2618104 6 Tsp3A FBtr0307159 2617756 2618435 ACTGCC 6mer2-7 dme-miR-34-5p X - 2618015 2618054 3'utr Tsp3A FlyBase G48607.1 ATGTTGTAATCGACTGCCTGGATAGCTGTATATACTCGTA 14 2618050 0.785712331 6 14 99 1 1.230448921 0.235294118 0.142857143 0.294117647 14 0 0 17 X:2618015-2618054 6 17 4328 FBgn0040334 330.6633333 22.46333333 34.46666667 0.051411809 0.756788841 0.493230174 -6 8 1 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 2621819 2621825 + X_2621819_2621825_+ 0.819654132 0.819631411 0.819642771 1.61E-05 Seipin FBtr0070442 2621718 2622140 X + 2621754 2621887 3'utr Seipin FlyBase G58413.1 ATGGAACGAAAGAGGGACCACCATTAACCACCGAAGGCTAGACCAACGCCCGTGCGACGCTTGAGCCAAAGACTAAATAGATTTAGGACTAAGTTAGTGAACACAGCCAGCTGAAGTATTCCGGCGGATTAGCT 89 2621815 0.962228355 14 82 416 0.91 1.481920138 0.14 0.101123596 0.2 89 7 2 91 X:2621754-2621887 7 Seipin FBtr0070442 2621718 2622140 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X + 2621760 2621854 3'utr Seipin FlyBase G44177.1 CGAAAGAGGGACCACCATTAACCACCGAAGGCTAGACCAACGCCCGTGCGACGCTTGAGCCAAAGACTAAATAGATTTAGGACTAAGTTAGTGAA 61 2621815 0.958105488 10 56 267 0.928571429 1.658011397 0.102040816 0.426229508 0.642857143 61 6 1 91 X:2621760-2621854 7 61 4329 FBgn0040336 110.8766667 6.436666667 9.653333333 0.550160839 9.476954946 6.319060773 4 4 4 0.15 dme-miR-305-5p 6mer2-7 GTACAA X 2633606 2633611 + X_2633606_2633611_+ 0.982554739 0.99190856 0.987231649 0.006614206 PI4KIIIalpha FBtr0331587 2633296 2633672 X + 2633561 2633647 3'utr PI4KIIIalpha FlyBase G58443.1 ATTTATAAATATTAAATCAATTATAGGGCAATATGTTATATAATGGTACAACAAGAAATGTATTATTAGAGGGAAGTGGATGTCGTT 16 2633604 0.983540521 5 14 113 0.913043478 1.021189299 0.217391304 0.3125 0.52173913 16 1 1 21 X:2633561-2633647 6 PI4KIIIalpha FBtr0331587 2633296 2633672 GTACAA 6mer2-7 dme-miR-305-5p X + 2633559 2633656 3'utr PI4KIIIalpha FlyBase G44204.1 ATATTTATAAATATTAAATCAATTATAGGGCAATATGTTATATAATGGTACAACAAGAAATGTATTATTAGAGGGAAGTGGATGTCGTTTTTGGTGGT 13 2633603 0.983686763 7 13 104 1 1.230448921 0.470588235 0.307692308 0.470588235 13 0 0 17 X:2633559-2633656 6 8.5 4330 FBgn0267350 1055.98 18.11666667 27.74666667 0.008049395 0.469181233 0.306343104 2 3 2.5 0.15 dme-miR-7-5p 6mer3-8 GTCTTC X 2695020 2695025 - X_2695020_2695025_- 0.917145782 0.999997297 0.95857154 0.058584857 CG2658 FBtr0070502|FBtr0345716 2694721|2694390 2695063|2695063 X - 2694950 2695039 3'utr CG2658 FlyBase G64508.1 AAGTCATAGCCATAGTCTTCGTACGCCACGTGCCCCTAGTCGCTCACCTTTTCGCCCGCCCCTGGCTCATGTGCGTTGAATGTAAATAAA 12 2695032 0.969947572 9 11 62 0.933333333 1.146128036 0.133333333 0.166666667 0.333333333 12 1 0 14 X:2694950-2695039 6 CG2658 FBtr0070502|FBtr0345716 2694721|2694390 2695063|2695063 GTCTTC 6mer3-8 dme-miR-7-5p X - 2694946 2695049 3'utr CG2658 FlyBase G48614.1 CTCAGATCGCAAGTCATAGCCATAGTCTTCGTACGCCACGTGCCCCTAGTCGCTCACCTTTTCGCCCGCCCCTGGCTCATGTGCGTTGAATGTAAATAAAGTTG 15 2695033 0.973421513 8 15 90 1 1.342422681 0.090909091 0.266666667 0.5 15 0 0 22 X:2694946-2695049 6 6 4331 FBgn0024992 506.2333333 20.17 30.76333333 0.011852242 0.297471492 0.195037382 7 8 7.5 0.15 dme-miR-308-3p 7mer-m1 TGTGATT X 269695 269701 - X_269695_269701_- 0.501049718 0.499682595 0.500366157 0.000966686 ewg FBtr0332978|FBtr0332976|FBtr0332977|FBtr0308209|FBtr0089441|FBtr0308208 269590|269590|269590|269609|269609|269609 273303|270568|270568|270568|270568|270568 X - 269658 269728 3'utr ewg FlyBase G63738.1 AAATTTTATTTAAAAAAAAGCGATTGTTGTGATTTTAATATAATTTTACCTTAAAATATTTGCTTGTACAT 89 269704 0.98749666 8 88 922 0.990291262 2.008600172 0.097087379 0.146067416 0.262135922 89 1 0 102 X:269658-269728 7 ewg FBtr0089441|FBtr0308208|FBtr0332977|FBtr0308209|FBtr0332976|FBtr0332978 269609|269609|269590|269609|269590|269590 270568|270568|270568|270568|270568|273303 TGTGATT 7mer-m1 dme-miR-308-3p X - 269676 269728 3'utr ewg FlyBase G48050.1 AAATTTTATTTAAAAAAAAGCGATTGTTGTGATTTTAATATAATTTTACCTTA 55 269704 0.81827912 7 53 576 0.973684211 1.86923172 0.065789474 0.254545455 0.460526316 55 2 0 74 X:269676-269728 7 71.5 4332 FBgn0005427 485.9333333 14.70333333 22.51 0.147139525 4.862842893 3.17636606 3 3 3 0.15 dme-miR-2535b-3p 8mer-m1 CCGTGAGT X 270080 270087 - X_270080_270087_- 0.405265585 0.441348552 0.423307068 0.025514534 ewg FBtr0332978|FBtr0332976|FBtr0332977|FBtr0308209|FBtr0089441|FBtr0308208 269590|269590|269590|269609|269609|269609 273303|270568|270568|270568|270568|270568 X - 270066 270121 3'utr ewg FlyBase G63739.1 ATCAGCCAGCCTACAGTTAGACGTACCTGTAACCCCGTGAGTTCTCGCTCCATACC 32 270092 0.784666311 7 31 159 0.976744186 1.62324929 0.093023256 0.3125 0.488372093 32 1 0 42 X:270066-270121 8 ewg FBtr0089441|FBtr0308208|FBtr0332977|FBtr0308209|FBtr0332976|FBtr0332978 269609|269609|269590|269609|269590|269590 270568|270568|270568|270568|270568|273303 CCGTGAGT 8mer-m1 dme-miR-2535b-3p X - 270067 270119 3'utr ewg FlyBase G48051.1 CAGCCAGCCTACAGTTAGACGTACCTGTAACCCCGTGAGTTCTCGCTCCATAC 24 270092 0.719497235 5 20 128 0.853658537 1.243038049 0.048780488 0.416666667 0.658536585 24 5 1 35 X:270067-270119 8 20.5 4333 FBgn0005427 485.9333333 14.70333333 22.51 0.042186857 1.394241669 0.910706353 5 5 5 0.15 dme-bantam-3p 8mer-A1 TGATCTCA X 270995 271002 - X_270995_271002_- 0.630507107 0.627285204 0.628896156 0.002278227 ewg FBtr0332978 269590 273303 X - 270977 271032 3'utr ewg FlyBase G63747.1 TGGGAAATGGCGGCGTTCAGTGCTATTCGCTGATCTCAGCGGGATCGTCAGTCCTA 57 271002 0.781620344 6 52 383 0.955223881 1.329058719 0.253731343 0.175438596 0.298507463 57 1 2 64 X:270977-271032 8 ewg FBtr0332978 269590 273303 TGATCTCA 8mer-A1 dme-bantam-3p X - 270969 271041 3'utr ewg FlyBase G48057.1 CATCCTCTTTGGGAAATGGCGGCGTTCAGTGCTATTCGCTGATCTCAGCGGGATCGTCAGTCCTAAGCCGGCG 35 271002 0.814625189 5 31 219 0.898305085 1.72427587 0.220338983 0.558823529 0.745762712 34 6 0 53 X:270969-271041 8 41.5 4334 FBgn0005427 485.9333333 14.70333333 22.51 0.085402662 2.822489231 1.843625056 0 0 0 0.15 dme-bantam-3p 8mer-A1 TGATCTCA X 271178 271185 - X_271178_271185_- 0.630549545 0.629196096 0.62987282 0.000956998 ewg FBtr0332978|FBtr0100578|FBtr0100582 269590|268507|268507 273303|271561|271561 X - 271121 271211 intron-5'utr ewg FlyBase G63748.1 AGGATATCCCGTTTCGGTGAGCAATGTGATCTCAGTTCCCGTCTCTATGTACCAGTCGGTAATGGCCAACGTGCAGCAGATCCAGACGAAC 63 271185 0.987010927 12 61 528 0.958333333 1.838849091 0.166666667 0.142857143 0.25 63 3 0 69 X:271121-271211 8 ewg FBtr0100582|FBtr0332978|FBtr0100578 268507|269590|268507 271561|273303|271561 TGATCTCA 8mer-A1 dme-bantam-3p X - 271136 271211 intron-5'utr ewg FlyBase G48058.1 AGGATATCCCGTTTCGGTGAGCAATGTGATCTCAGTTCCCGTCTCTATGTACCAGTCGGTAATGGCCAACGTGCAG 53 271186 0.983633203 9 50 422 0.942857143 1.342422681 0.228571429 0.264150943 0.442857143 53 2 2 66 X:271136-271211 8 55 4335 FBgn0005427 485.9333333 14.70333333 22.51 0.11318425 3.740648379 2.443358507 0 1 0.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 2717227 2717232 + X_2717227_2717232_+ 0.481835047 0.503484315 0.492659681 0.015308367 CG2694 FBtr0070481|FBtr0070481|FBtr0070481|FBtr0070482|FBtr0070482|FBtr0070482|FBtr0310649|FBtr0310649|FBtr0310649 2717107|2717107|2717107|2717107|2717107|2717107|2717107|2717107|2717107 2717654|2717654|2717654|2717654|2717654|2717654|2717654|2717654|2717654 X + 2717194 2717288 3'utr CG2694 FlyBase G58487.1 AAAATGGAGCAGCCTCCAGTGAAAACGAACACGCTGTGACCTACTTTATATACCTACCTACATTTTATACAAACTTCTATAACCTGTACAATGGC 98 2717228 0.869808934 13 96 530 0.983870968 1.785329835 0 0.183673469 0.35483871 98 1 1 122 X:2717194-2717288 6 CG2694 FBtr0070482|FBtr0070482|FBtr0070482|FBtr0310649|FBtr0310649|FBtr0310649|FBtr0070481|FBtr0070481|FBtr0070481 2717107|2717107|2717107|2717107|2717107|2717107|2717107|2717107|2717107 2717654|2717654|2717654|2717654|2717654|2717654|2717654|2717654|2717654 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X + 2717194 2717250 3'utr CG2694 FlyBase G44236.1 AAAATGGAGCAGCCTCCAGTGAAAACGAACACGCTGTGACCTACTTTATATACCTAC 65 2717228 0.878982731 8 61 325 0.965909091 1.62838893 0.022727273 0.261538462 0.454545455 65 2 1 85 X:2717194-2717250 6 76 4336 FBgn0024991 290.3333333 11.33666667 17.40333333 0.261768083 6.703910615 4.366979506 -1 -1 -1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 2734792 2734797 - X_2734792_2734797_- 0.726145511 0.628693148 0.67741933 0.068909253 crm FBtr0070495|FBtr0070495|FBtr0070495|FBtr0070496|FBtr0070496|FBtr0070496 2734246|2734246|2734246|2734246|2734246|2734246 2735002|2735002|2735002|2735002|2735002|2735002 X - 2734715 2734817 3'utr crm FlyBase G64551.1 TATGTTTTTACGCGACTTTTTGTGATCTATACTCATTTTATGTATGCCAAGTATTAGCAAGCACTCACATTGTCTGAACATATATATTTATTTATACATTAAC 239 2734796 0.777182562 16 230 1811 0.967105263 1.62324929 0.381578947 0.217573222 0.384868421 239 4 6 294 X:2734715-2734817 6 crm FBtr0070495|FBtr0070495|FBtr0070495|FBtr0070496|FBtr0070496|FBtr0070496 2734246|2734246|2734246|2734246|2734246|2734246 2735002|2735002|2735002|2735002|2735002|2735002 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 2734779 2734816 3'utr crm FlyBase G48645.1 ATGTTTTTACGCGACTTTTTGTGATCTATACTCATTTT 108 2734796 0.648362768 10 108 942 1 2.176091259 0.806666667 0.314814815 0.506666667 108 0 0 150 X:2734779-2734816 6 115 4337 FBgn0000376 219.6566667 6.966666667 10.63 0.523544319 16.50717703 10.81843838 -1 -1 -1 0.15 dme-miR-283-5p 8mer-A1 TGATATTA X 2734865 2734872 - X_2734865_2734872_- 0.592174618 0.590714274 0.591444446 0.001032588 crm FBtr0070495|FBtr0070496 2734246|2734246 2735002|2735002 X - 2734840 2734898 3'utr crm FlyBase G64552.1 GTGTGCCTCCAAGCCTCATGTCCCACTGATATTACTCATTACTCACTCATCCCACCCAC 11 2734873 0.971848226 7 11 64 1 1.041392685 0.363636364 0 0 11 0 0 11 X:2734840-2734898 8 crm FBtr0070495|FBtr0070496 2734246|2734246 2735002|2735002 TGATATTA 8mer-A1 dme-miR-283-5p X - 2734838 2734873 3'utr crm FlyBase G48646.1 CTGATATTACTCATTACTCACTCATCCCACCCACCC 5 2734872 0.971902486 4 4 17 1 0.698970004 0.4 0 0 5 0 0 5 X:2734838-2734873 8 7 4338 FBgn0000376 219.6566667 6.966666667 10.63 0.031867915 1.004784689 0.658513641 1 0 0.5 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA X 2949079 2949086 + X_2949079_2949086_+ 0.624516187 0.624991468 0.624753828 0.000336088 CG3603 FBtr0332493 2948923 2949120 X + 2949060 2949098 3'utr CG3603 FlyBase G58505.1 AAGAGTAGGACCAGATTATTGCATTTACTTGTCAAGCCA 25 2949078 0.747567587 3 25 220 1 1.447158031 0.535714286 0.12 0.214285714 25 0 0 28 X:2949060-2949098 8 CG3603 FBtr0332493 2948923 2949120 TGCATTTA 8mer-A1 dme-miR-277-3p X + 2949060 2949092 3'utr CG3603 FlyBase G44249.1 AAGAGTAGGACCAGATTATTGCATTTACTTGTC 17 2949078 0.718231916 4 16 149 0.913043478 1.322219295 0.217391304 0.352941176 0.52173913 17 2 0 21 X:2949060-2949092 8 21 4339 FBgn0029648 25 3.55 5.413333333 0.84 5.915492958 3.879310345 1 1 1 0.15 dme-miR-308-3p 7mer-m1 TGTGATT X 3132826 3132832 + X_3132826_3132832_+ 0.52122385 0.521223851 0.521223851 7.07E-08 kirre FBtr0309501 3132424 3134532 X + 3132812 3132855 3'utr kirre FlyBase G58507.1 AACAAAAACCGTATTGTGATTTATAGCGTTAATTATTTTATGGC 25 3132825 0.743187544 4 23 264 0.928571429 1.414973348 0 0.12 0.214285714 25 2 0 26 X:3132812-3132855 7 kirre FBtr0309501 3132424 3134532 TGTGATT 7mer-m1 dme-miR-308-3p X + 3132815 3132847 3'utr kirre FlyBase G44251.1 AAAAACCGTATTGTGATTTATAGCGTTAATTAT 17 3132832 0.611854312 4 16 162 1 1.342422681 0.136363636 0.294117647 0.454545455 17 0 0 22 X:3132815-3132847 7 20.5 4340 FBgn0028369 20.34666667 0.466666667 0.723333333 1.007536042 43.92857143 28.34101382 1 -6 -2.5 0.15 dme-miR-988-3p 8mer-m1 ACAAGGGG X 3385571 3385578 + X_3385571_3385578_+ 0.62813 0.628176281 0.628153141 3.27E-05 dm FBtr0331605|FBtr0070525 3385311|3385311 3391697|3386011 X + 3385555 3385841 5'utr dm FlyBase G58551.1 TACCATACCATACCATACAAGGGGTTAGAGTTTACGAGTGATTTAACAAATTTGATTTCTTCAATGTGATATATATATGATTTTCTTTCCGCGCGATTTGATTTGGTAGGGAAAGGTTAACGAAAGCGGTTTTATGAAATCAATTTGAAGTGTTTTTTTTTCGCTGCATATATTACAATATACACGTATGGATTAGATTTAATTAACAATTAGCGGTCTGTATATAACATATGAAGTAGAATATCTTAATTATTTTTTTGAATTAGTTACTTAACCATGAAGTAAAC 664 3385570 0.977674322 62 611 4768 0.914540816 1.679427897 0.275510204 0.155120482 0.284438776 664 53 14 717 X:3385555-3385841 8 dm FBtr0331605|FBtr0070525 3385311|3385311 3391697|3386011 ACAAGGGG 8mer-m1 dme-miR-988-3p X + 3385555 3385714 5'utr dm FlyBase G44286.1 TACCATACCATACCATACAAGGGGTTAGAGTTTACGAGTGATTTAACAAATTTGATTTCTTCAATGTGATATATATATGATTTTCTTTCCGCGCGATTTGATTTGGTAGGGAAAGGTTAACGAAAGCGGTTTTATGAAATCAATTTGAAGTGTTTTTTTT 297 3385570 0.91509451 39 263 2207 0.891304348 1.567026366 0.20531401 0.32996633 0.519323671 297 36 9 369 X:3385555-3385714 8 282 4341 FBgn0262656 5210.653333 68.99333333 106.66 0.054119893 4.087351435 2.643915245 1 1 1 0.15 dme-miR-304-5p 6mer3-8 TGAGAT X 3386098 3386103 + X_3386098_3386103_+ 0.723522637 0.746961246 0.735241941 0.016573593 dm FBtr0331605 3385311 3391697 X + 3386051 3386137 3'utr dm FlyBase G58555.1 GAGCCACAAAGAGGAGATAGAGCACACAAAGTTGGGAGCGAGAACGATGAGATATATACTTATATAACATCTATATATCTATATATC 67 3386098 0.976643017 8 65 326 0.974683544 1.58546073 0.113924051 0.179104478 0.303797468 67 1 1 77 X:3386051-3386137 6 dm FBtr0331605 3385311 3391697 TGAGAT 6mer3-8 dme-miR-304-5p X + 3386042 3386119 3'utr dm FlyBase G44289.1 ACAACGAAGGAGCCACAAAGAGGAGATAGAGCACACAAAGTTGGGAGCGAGAACGATGAGATATATACTTATATAACA 53 3386098 0.959554018 9 50 226 0.96969697 1.806179974 0.090909091 0.20754717 0.363636364 53 2 0 64 X:3386042-3386119 6 50 4342 FBgn0262656 5210.653333 68.99333333 106.66 0.009595726 0.724707701 0.468779299 0 0 0 0.15 dme-miR-1008-3p 6mer3-8 AGCTGT X 3387014 3387019 + X_3387014_3387019_+ 0.664784703 0.678121017 0.67145286 0.009430188 dm FBtr0331605 3385311 3391697 X + 3386759 3387188 3'utr dm FlyBase G58557.2 ATATATTTTTTAACTGATAACTATGCATATGAAATGCGCAAAACTTAACGAAAACAAAACGGAATTAAGGAAACATTAAACTATATAATAGTGCTAAGCCGCGCCTAACCTCTCGAGATATATATAGTTAGGATGAGAGATAGGAAGAGTGTAGAAATTGGCTGCAAAGTTTGTGATTGGAGTTAAGAGAGGAGAGACCCAGAGAGAGATATATACACCCACGACCCAAGACCCAAGAAAACTCAAACTTTTGTGAGCTGTTTAACTGTCGATTTTTTGCTAATAAGTTATAGCCTTCCGGCGATATGTTATATATATATATATGTTATAACGATTCTACCAATTGTTTACACGCATCTAAGTATCAACTAAACTAAAAACTACTACTAAACTAATGGACATGAAGCATAAGGCAAATGCAAATGAAGTT 1579 3387033 0.918198984 82 1389 15981 0.884320175 1.67615545 0.270833333 0.132995567 0.249451754 1579 178 33 1613 X:3386759-3387188 6 dm FBtr0331605 3385311 3391697 AGCTGT 6mer3-8 dme-miR-1008-3p X + 3386817 3387087 3'utr dm FlyBase G44294.2 ACGGAATTAAGGAAACATTAAACTATATAATAGTGCTAAGCCGCGCCTAACCTCTCGAGATATATATAGTTAGGATGAGAGATAGGAAGAGTGTAGAAATTGGCTGCAAAGTTTGTGATTGGAGTTAAGAGAGGAGAGACCCAGAGAGAGATATATACACCCACGACCCAAGACCCAAGAAAACTCAAACTTTTGTGAGCTGTTTAACTGTCGATTTTTTGCTAATAAGTTATAGCCTTCCGGCGATATGTTATATATATATATATGTTAT 1147 3387033 0.992090859 53 1040 11654 0.912543153 1.768939419 0.284810127 0.380122058 0.590909091 1147 126 26 1586 X:3386817-3387087 6 822.5 4343 FBgn0262656 5210.653333 68.99333333 106.66 0.157849687 11.92144169 7.711419464 -19 -19 -19 0.15 dme-miR-968-5p 6mer3-8 ACTACT X 3388418 3388423 + X_3388418_3388423_+ 0.976628109 0.99999633 0.98831222 0.016523813 dm FBtr0331605 3385311 3391697 X + 3388402 3388450 3'utr dm FlyBase G58567.1 ATATACACACACACAAACTACTATTTGAATTAGTTGTTAAAAAATTTAT 7 3388424 0.987064162 5 7 57 1 0.954242509 0.222222222 0.285714286 0.444444444 7 0 0 9 X:3388402-3388450 6 dm FBtr0331605 3385311 3391697 ACTACT 6mer3-8 dme-miR-968-5p X + 3388362 3388442 3'utr dm FlyBase G44302.1 AGTTTAAATATATTTTTATGATTATCAAATTTTTTATATTATATACACACACACAAACTACTATTTGAATTAGTTGTTAAA 13 3388426 0.976669359 7 12 140 0.9375 1.176091259 0.1875 0.230769231 0.375 13 1 0 15 X:3388362-3388442 6 5.5 4344 FBgn0262656 5210.653333 68.99333333 106.66 0.00105553 0.079717847 0.051565723 -6 -8 -7 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 3388918 3388923 + X_3388918_3388923_+ 0.99827529 0.994472685 0.996373988 0.002688844 dm FBtr0331605 3385311 3391697 X + 3388891 3388962 3'utr dm FlyBase G58571.1 AAGTAAACACAATAAATTACATTTTATGTACCTTCTACATATATAAACTAAATATATTACACAGAACACACA 135 3388917 0.979817993 9 127 1467 0.945205479 2.139879086 0 0.074074074 0.143835616 135 8 0 138 X:3388891-3388962 6 dm FBtr0331605 3385311 3391697 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X + 3388885 3388948 3'utr dm FlyBase G44308.1 TGAGAAAAGTAAACACAATAAATTACATTTTATGTACCTTCTACATATATAAACTAAATATATT 83 3388917 0.992824373 11 76 891 0.923664122 1.480725379 0.022900763 0.481927711 0.671755725 83 7 3 121 X:3388885-3388948 6 105.5 4345 FBgn0262656 5210.653333 68.99333333 106.66 0.020246981 1.52913325 0.98912432 1 1 1 0.15 dme-miR-1012-3p 8mer-A1 TTGACTAA X 3489219 3489226 + X_3489219_3489226_+ 0.610990656 0.610787043 0.61088885 0.000144038 CG10803 FBtr0331612|FBtr0332285 3488215|3488215 3490915|3490915 X + 3489201 3489240 3'utr CG10803 FlyBase G58590.1 CGAGCAAACGCTACCAATTTGACTAAAATTAGTTAAGTGA 15 3489219 0.814163105 2 13 103 0.866666667 1.113943352 0.266666667 0 0 15 2 0 13 X:3489201-3489240 8 CG10803 FBtr0332285|FBtr0331612 3488215|3488215 3490915|3490915 TTGACTAA 8mer-A1 dme-miR-1012-3p X + 3489206 3489253 3'utr CG10803 FlyBase G44325.1 AAACGCTACCAATTTGACTAAAATTAGTTAAGTGAAATTATACTCAAA 13 3489219 0.984350701 4 11 82 0.9 0.954242509 0.15 0.384615385 0.6 13 1 1 18 X:3489206-3489253 8 12.5 4346 FBgn0029666 905.38 23.07666667 35.43666667 0.013806358 0.541672685 0.352741981 0 0 0 0.15 dme-miR-307a-3p 7mer-A1 GTTGTGA X 3489473 3489479 + X_3489473_3489479_+ 0.787804955 0.729645959 0.758725457 0.041124623 CG10803 FBtr0331612|FBtr0332285 3488215|3488215 3490915|3490915 X + 3489435 3489486 3'utr CG10803 FlyBase G58591.1 CTAACCAAATGTTTCCACACGCGTCTGTGAAGTAAACCGTTGTGATCGCTTT 7 3489474 0.978849824 3 7 49 1 0.84509804 0 0 0 7 0 0 7 X:3489435-3489486 7 CG10803 FBtr0332285|FBtr0331612 3488215|3488215 3490915|3490915 GTTGTGA 7mer-A1 dme-miR-307a-3p X + 3489443 3489485 3'utr CG10803 FlyBase G44326.1 ATGTTTCCACACGCGTCTGTGAAGTAAACCGTTGTGATCGCTT 11 3489474 0.98357939 4 9 69 0.823529412 0.84509804 0.117647059 0.545454545 0.705882353 11 2 1 14 X:3489443-3489485 7 8 4347 FBgn0029666 905.38 23.07666667 35.43666667 0.008836069 0.346670519 0.225754868 -1 -1 -1 0.15 dme-miR-980-3p 8mer-A1 GGCAGCTA X 3489594 3489601 + X_3489594_3489601_+ 0.643779561 0.575072051 0.609425806 0.048583539 CG10803 FBtr0331612|FBtr0332285 3488215|3488215 3490915|3490915 X + 3489527 3489645 3'utr CG10803 FlyBase G58592.1 AACTACAAACTACTAAATACTGAATACTGAATACAAAAACAGATAAGCCGGAAAATGAGCCGCAACAGGCAGCTATAAGTTATTTTATATATTTTGTAAACTCGAAATCATTAGGAGTG 28 3489582 0.956221833 10 26 125 0.903225806 1.447158031 0.258064516 0.107142857 0.193548387 28 3 0 28 X:3489527-3489645 8 CG10803 FBtr0332285|FBtr0331612 3488215|3488215 3490915|3490915 GGCAGCTA 8mer-A1 dme-miR-980-3p X + 3489575 3489616 3'utr CG10803 FlyBase G44327.1 CGGAAAATGAGCCGCAACAGGCAGCTATAAGTTATTTTATAT 8 3489602 0.842063711 3 7 19 0.888888889 0.903089987 0.666666667 0.125 0.222222222 8 1 0 8 X:3489575-3489616 8 15.5 4348 FBgn0029666 905.38 23.07666667 35.43666667 0.017119883 0.67167413 0.437400056 12 -8 2 0.15 dme-bantam-3p 7mer-m8 TGATCTC X 3508783 3508789 - X_3508783_3508789_- 0.661408611 0.660804284 0.661106448 0.000427305 CG32791 FBtr0333795 3507243 3513002 X - 3508763 3508805 3'utr CG32791 FlyBase G64593.1 TTTTTAATTAATTCATTGATCTCTTCTCACAAGGTTGGTTCTC 34 3508789 0.679050608 5 33 321 0.976190476 1.612783857 0 0.205882353 0.357142857 34 1 0 41 X:3508763-3508805 7 CG32791 FBtr0333795 3507243 3513002 TGATCTC 7mer-m8 dme-bantam-3p X - 3508763 3508805 3'utr CG32791 FlyBase G48671.1 TTTTTAATTAATTCATTGATCTCTTCTCACAAGGTTGGTTCTC 15 3508789 0.645855555 5 15 142 1 1.397940009 0 0.466666667 0.68 15 0 0 25 X:3508763-3508805 7 24.5 4349 FBgn0052791 287.9933333 6.18 9.406666667 0.085071414 3.964401294 2.60453579 0 0 0 0.15 dme-miR-276a-3p 6mer3-8 AGTTCC X 3701056 3701061 + X_3701056_3701061_+ 0.939806764 0.939608539 0.939707651 0.000140219 Mnt FBtr0307278|FBtr0301823|FBtr0343578|FBtr0307277|FBtr0301822 3700740|3700740|3700740|3700740|3700740 3701672|3701672|3701672|3701672|3701672 X + 3701032 3701082 3'utr Mnt FlyBase G58608.1 AGATAAAAACAAAAGCTATCAAACAGTTCCGCCCAACACTTAGCATCGATT 334 3701058 0.8111104 5 332 1151 0.989821883 2.288919606 0.022900763 0.161676647 0.287531807 334 3 1 389 X:3701032-3701082 6 Mnt FBtr0307277|FBtr0301822|FBtr0301823|FBtr0343578|FBtr0307278 3700740|3700740|3700740|3700740|3700740 3701672|3701672|3701672|3701672|3701672 AGTTCC 6mer3-8 dme-miR-276a-3p X + 3701035 3701083 3'utr Mnt FlyBase G44338.1 TAAAAACAAAAGCTATCAAACAGTTCCGCCCAACACTTAGCATCGATTT 165 3701058 0.782742676 4 164 559 0.984555985 1.707570176 0.015444015 0.424242424 0.633204633 165 0 4 255 X:3701035-3701083 6 248.5 4350 FBgn0023215 795.77 23.85 36.51 0.31227616 10.41928721 6.806354423 -2 -2 -2 0.15 dme-miR-277-3p 6mer3-8 TGCATT X 3705060 3705065 - X_3705060_3705065_- 0.962194308 0.995651075 0.978922692 0.02365753 Rala FBtr0070583|FBtr0070584|FBtr0070582 3704982|3704608|3704982 3707374|3707374|3706146 X - 3705037 3705075 3'utr Rala FlyBase G64618.1 TTTGTATAACTGCATTCTGTATTGTAATATTTAAGCTAT 10 3705061 0.780215803 5 10 111 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 X:3705037-3705075 6 Rala FBtr0070583|FBtr0070584|FBtr0070582 3704982|3704608|3704982 3707374|3707374|3706146 TGCATT 6mer3-8 dme-miR-277-3p X - 3705005 3705083 3'utr Rala FlyBase G48689.1 TGTTTACTTTTGTATAACTGCATTCTGTATTGTAATATTTAAGCTATTATTATTATGATAATTATTATTATTATTAAAT 13 3705060 0.99074505 7 13 144 1 1.361727836 0 0.461538462 0.695652174 13 0 0 23 X:3705005-3705083 6 10 4351 FBgn0015286 835.0366667 45.75666667 69.86666667 0.011975522 0.218547388 0.143129771 -4 -5 -4.5 0.15 dme-miR-965-3p 7mer-A1 ACGCTTA X 3705658 3705664 - X_3705658_3705664_- 0.817764733 0.808643033 0.813203883 0.006450016 Rala FBtr0070583|FBtr0070584|FBtr0070582 3704982|3704608|3704982 3707374|3707374|3706146 X - 3705639 3705683 3'utr Rala FlyBase G64620.1 AAACCTAAAGCTGAAGCTAACGCTTAAACATATTAAATATAATCA 6 3705666 0.940817106 2 6 31 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 X:3705639-3705683 7 Rala FBtr0070583|FBtr0070584|FBtr0070582 3704982|3704608|3704982 3707374|3707374|3706146 ACGCTTA 7mer-A1 dme-miR-965-3p X - 3705625 3705678 3'utr Rala FlyBase G48690.1 TAAAGCTGAAGCTAACGCTTAAACATATTAAATATAATCATCAATCGTAGACAA 5 3705666 0.938185392 3 5 22 1 0.77815125 0 0.2 0.333333333 5 0 0 6 X:3705625-3705678 7 5 4352 FBgn0015286 835.0366667 45.75666667 69.86666667 0.005987761 0.109273694 0.071564885 2 2 2 0.15 dme-bantam-3p 6mer3-8 TGATCT X 3706238 3706243 - X_3706238_3706243_- 0.999863382 0.999917226 0.999890304 3.80E-05 Rala FBtr0070583|FBtr0070584 3704982|3704608 3707374|3707374 X - 3706216 3706253 intron-3'utr Rala FlyBase G64622.1 AGGTATTTTATGATCTAATCAGGGATATTTCATCGCGT 8 3706243 0.747518503 2 8 84 1 0.903089987 0.375 0 0 8 0 0 8 X:3706216-3706253 6 Rala FBtr0070583|FBtr0070584 3704982|3704608 3707374|3707374 TGATCT 6mer3-8 dme-bantam-3p X - 3706224 3706252 intron-3'utr Rala FlyBase G48692.1 GGTATTTTATGATCTAATCAGGGATATTT 5 3706244 0.963311441 3 5 40 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 X:3706224-3706252 6 6.5 4353 FBgn0015286 835.0366667 45.75666667 69.86666667 0.007784089 0.142055802 0.093034351 0 1 0.5 0.15 dme-miR-308-3p 7mer-m1 TGTGATT X 3787057 3787063 + X_3787057_3787063_+ 0.521218536 0.521091991 0.521155264 8.94E-05 tlk FBtr0299581|FBtr0070596|FBtr0333753|FBtr0299582|FBtr0299580|FBtr0299579|FBtr0333751 3786403|3786403|3786403|3786403|3786403|3786403|3786403 3787977|3787977|3789770|3787977|3788818|3787977|3789770 X + 3787030 3787139 3'utr tlk FlyBase G58647.1 AACAAATTATTGCATTATCTGCTGGATTGTGATTGTGGTTCAAACATTAAAAATACACTTACTCATACACACAAGGTAGACACTGCAGACTAATTTTGCCTTAAAAGAAA 58 3787062 0.98275765 15 54 495 0.945945946 1.84509804 0.175675676 0.172413793 0.351351351 58 4 0 70 X:3787030-3787139 7 tlk FBtr0333751|FBtr0299582|FBtr0299580|FBtr0299579|FBtr0070596|FBtr0333753|FBtr0299581 3786403|3786403|3786403|3786403|3786403|3786403|3786403 3789770|3787977|3788818|3787977|3787977|3789770|3787977 TGTGATT 7mer-m1 dme-miR-308-3p X + 3787029 3787077 3'utr tlk FlyBase G44367.1 TAACAAATTATTGCATTATCTGCTGGATTGTGATTGTGGTTCAAACATT 38 3787063 0.80106654 9 35 391 0.915254237 1.431363764 0.203389831 0.421052632 0.627118644 38 4 1 54 X:3787029-3787077 7 37 4354 FBgn0086899 3401.553333 62.96 97.16333333 0.010877383 0.587674714 0.380802086 -5 -6 -5.5 0.15 dme-miR-34-5p 6mer3-8 CACTGC X 3787110 3787115 + X_3787110_3787115_+ 0.805772978 0.965903723 0.88583835 0.113229504 tlk FBtr0299581|FBtr0070596|FBtr0333753|FBtr0299582|FBtr0299580|FBtr0299579|FBtr0333751 3786403|3786403|3786403|3786403|3786403|3786403|3786403 3787977|3787977|3789770|3787977|3788818|3787977|3789770 X + 3787030 3787139 3'utr tlk FlyBase G58647.1 AACAAATTATTGCATTATCTGCTGGATTGTGATTGTGGTTCAAACATTAAAAATACACTTACTCATACACACAAGGTAGACACTGCAGACTAATTTTGCCTTAAAAGAAA 58 3787113 0.98275765 15 54 495 0.945945946 1.84509804 0.175675676 0.172413793 0.351351351 58 4 0 70 X:3787030-3787139 6 tlk FBtr0333751|FBtr0299582|FBtr0299580|FBtr0299579|FBtr0070596|FBtr0333753|FBtr0299581 3786403|3786403|3786403|3786403|3786403|3786403|3786403 3789770|3787977|3788818|3787977|3787977|3789770|3787977 CACTGC 6mer3-8 dme-miR-34-5p X + 3787084 3787139 3'utr tlk FlyBase G44368.1 ACACTTACTCATACACACAAGGTAGACACTGCAGACTAATTTTGCCTTAAAAGAAA 15 3787113 0.973749304 7 15 90 1 1.255272505 0.277777778 0.2 0.333333333 15 0 0 18 X:3787084-3787139 6 17.5 4355 FBgn0086899 3401.553333 62.96 97.16333333 0.005144708 0.277954257 0.180109095 -3 -3 -3 0.15 dme-miR-14-3p 8mer-A1 AAGACTGA X 3791691 3791698 + X_3791691_3791698_+ 0.641083897 0.64231789 0.641700894 0.00087257 HIP-R FBtr0070597|FBtr0333764|FBtr0070598 3791667|3791667|3791667 3792477|3792477|3792477 X + 3791616 3791710 stop_codon HIP-R FlyBase G58657.1 AGCCTAAGCCTAAAAAGGACTCCGCCGACTTCGTCGATGACGGTTTGGACTAAGGTTTAGAAATGGGGCAGTAGTAAGACTGAAACATGCGTCGA 131 3791690 0.774859864 7 111 444 0.854304636 1.508529719 0.046357616 0.13740458 0.251655629 131 19 3 129 X:3791616-3791710 8 HIP-R FBtr0070598|FBtr0333764|FBtr0070597 3791667|3791667|3791667 3792477|3792477|3792477 AAGACTGA 8mer-A1 dme-miR-14-3p X + 3791656 3791725 stop_codon HIP-R FlyBase G44375.1 CGGTTTGGACTAAGGTTTAGAAATGGGGCAGTAGTAAGACTGAAACATGCGTCGATAAAAAGAAGTTAAC 91 3791690 0.929287388 6 81 304 0.905511811 1.759667845 0.023622047 0.274725275 0.480314961 91 11 1 115 X:3791656-3791725 8 104 4356 FBgn0029676 2406.406667 147.0733333 226.7733333 0.043217965 0.70713023 0.458607714 1 1 1 0.15 dme-miR-14-3p 8mer-A1 AAGACTGA X 3800774 3800781 + X_3800774_3800781_+ 0.641178478 0.641743403 0.64146094 0.000399445 HIP FBtr0070600 3800750 3801570 X + 3800738 3800796 stop_codon HIP FlyBase G58667.1 ACGGTTTGGACTAAGGTTTAGAAATGGGGCAGTAGTAAGACTGAAACATGCGTCGATAA 135 3800773 0.919593036 4 128 441 0.947976879 2.214843848 0 0.22962963 0.398843931 135 9 0 164 X:3800738-3800796 8 HIP FBtr0070600 3800750 3801570 AAGACTGA 8mer-A1 dme-miR-14-3p X + 3800739 3800793 stop_codon HIP FlyBase G44380.1 CGGTTTGGACTAAGGTTTAGAAATGGGGCAGTAGTAAGACTGAAACATGCGTCGA 83 3800773 0.912816725 5 77 256 0.959016393 1.767155866 0 0.34939759 0.557377049 83 4 1 117 X:3800739-3800793 8 107 4357 FBgn0260484 933.6966667 55.94 86.52333333 0.114598246 1.912763675 1.236660631 1 1 1 0.15 dme-miR-92b-3p 6mer3-8 GTGCAA X 3856620 3856625 + X_3856620_3856625_+ 0.915219448 0.880812486 0.898015967 0.024329352 ec FBtr0112801|FBtr0070606|FBtr0112802 3856584|3856584|3856584 3857621|3857621|3857621 X + 3856544 3856789 stop_codon ec FlyBase G58686.1 AACTGCGAGTACTACCTGCAGATGCTGAACCAGCGCAGATGATGATGATTCGACACTCGACCATCGACCATCTCTAGTGCAACTTTCTAGCCGTACATGGAACCCGTTAATCTCAAGCATTAAAATGCTGCCACGTCGCCAATAAGGAGCCGCCAAGGATGTACATAGCATGCTTACAAATACATAGATAGGTGTAAGGATATAAAGTGGTGCCAGCTAACAGGCGAATTGCATGGACCCGGACTC 191 3856628 0.970774783 25 181 1041 0.938016529 1.878904602 0.123966942 0.204188482 0.371900826 191 13 2 227 X:3856544-3856789 6 ec FBtr0112802|FBtr0112801|FBtr0070606 3856584|3856584|3856584 3857621|3857621|3857621 GTGCAA 6mer3-8 dme-miR-92b-3p X + 3856594 3856715 3'utr ec FlyBase G44391.1 CGACACTCGACCATCGACCATCTCTAGTGCAACTTTCTAGCCGTACATGGAACCCGTTAATCTCAAGCATTAAAATGCTGCCACGTCGCCAATAAGGAGCCGCCAAGGATGTACATAGCATG 133 3856628 0.932940516 14 124 696 0.935960591 1.801632346 0.108374384 0.406015038 0.610837438 133 11 2 190 X:3856594-3856715 6 81 4358 FBgn0000542 46.02 0.82 1.256666667 1.760104302 98.7804878 64.45623342 -8 -8 -8 0.15 dme-miR-1007-3p 7mer-m8 TGAGCTT X 3857276 3857282 + X_3857276_3857282_+ 0.620203364 0.616074018 0.618138691 0.002919927 ec FBtr0112801|FBtr0070606|FBtr0112802 3856584|3856584|3856584 3857621|3857621|3857621 X + 3857128 3857322 3'utr ec FlyBase G58688.1 ACCCAAAGCCTGACCAGTCGTCCGCCTCCATAAACCACATTAGTGCTTTTTGTTTCGACATCGAATTTTATTTACATTTTTTTACCTAAGCTAACTAAATACGATTTATTTCTCTGTGTGAGACGCCAGCAGTTTGAAACTTGGTCGTTGAGCTTCCTTGTGCGTGCTGTTGTCCAACGACACTCGCACTTCCAT 55 3857276 0.986226984 26 54 447 0.984126984 1.792391689 0.206349206 0.109090909 0.222222222 55 1 0 62 X:3857128-3857322 7 ec FBtr0112802|FBtr0112801|FBtr0070606 3856584|3856584|3856584 3857621|3857621|3857621 TGAGCTT 7mer-m8 dme-miR-1007-3p X + 3857263 3857303 3'utr ec FlyBase G44395.1 GAAACTTGGTCGTTGAGCTTCCTTGTGCGTGCTGTTGTCCA 31 3857285 0.703249831 6 28 295 0.913043478 1.322219295 0.304347826 0.322580645 0.543478261 31 3 1 42 X:3857263-3857303 7 24.5 4359 FBgn0000542 46.02 0.82 1.256666667 0.532377227 29.87804878 19.49602122 0 -9 -4.5 0.15 dme-miR-8-3p 7mer-A1 AGTATTA X 3882633 3882639 + X_3882633_3882639_+ 0.821299604 0.742319479 0.781809542 0.055847364 VhaAC39-1 FBtr0070611 3882468 3882967 X + 3882601 3882655 3'utr VhaAC39-1 FlyBase G58712.1 ATGATACCGAGTCTGTATGTTTGTATGTAGCGAGTATTATTGCCGGTCCAGGCAA 12 3882640 0.979120639 6 11 83 1 1.113943352 0.153846154 0.083333333 0.153846154 12 0 0 13 X:3882601-3882655 7 VhaAC39-1 FBtr0070611 3882468 3882967 AGTATTA 7mer-A1 dme-miR-8-3p X + 3882623 3882707 3'utr VhaAC39-1 FlyBase G44416.1 GTATGTAGCGAGTATTATTGCCGGTCCAGGCAAATTTTTGTCAAGTGTTCAGACCCAAGCCTAGATTTCTCAGTTTCCGCGGCTC 10 3882641 0.984412347 6 7 64 0.8 1.079181246 0.2 0.4 0.6 10 3 0 12 X:3882623-3882707 7 7.5 4360 FBgn0028665 905.2066667 61.01 92.86666667 0.008285401 0.122930667 0.080760948 -7 -8 -7.5 0.15 dme-miR-184-5p 6mer3-8 TGATAA X 3882927 3882932 + X_3882927_3882932_+ 0.598411919 0.794308008 0.696359963 0.138519461 VhaAC39-1 FBtr0070611 3882468 3882967 X + 3882901 3882936 3'utr VhaAC39-1 FlyBase G58714.1 ACTTATACAAGAACTACATATGTGAATGATAAATCA 22 3882927 0.774460089 4 22 133 1 1.380211242 0 0.090909091 0.166666667 22 0 0 24 X:3882901-3882936 6 VhaAC39-1 FBtr0070611 3882468 3882967 TGATAA 6mer3-8 dme-miR-184-5p X + 3882894 3882932 3'utr VhaAC39-1 FlyBase G44417.1 AATGCATACTTATACAAGAACTACATATGTGAATGATAA 15 3882927 0.769106522 5 14 93 0.916666667 1.342422681 0 0.4 0.625 15 2 0 22 X:3882894-3882932 6 18.5 4361 FBgn0028665 905.2066667 61.01 92.86666667 0.020437322 0.303228979 0.199210337 0 0 0 0.15 dme-miR-304-5p 6mer3-8 TGAGAT X 3932508 3932513 - X_3932508_3932513_- 0.93046577 0.999996719 0.965231245 0.049165771 CG2938 FBtr0332387|FBtr0070627|FBtr0345712 3932154|3932154|3931998 3932955|3932955|3932955 X - 3932483 3932535 3'utr CG2938 FlyBase G64648.1 AAATCGTAGTCAACTCTCGAAATGAGATGTAAAACCTTACTTAATGCAATTTC 5 3932513 0.973831001 4 5 33 1 0.698970004 0 0 0 5 0 0 5 X:3932483-3932535 6 CG2938 FBtr0345712|FBtr0332387|FBtr0070627 3931998|3932154|3932154 3932955|3932955|3932955 TGAGAT 6mer3-8 dme-miR-304-5p X - 3932489 3932565 3'utr CG2938 FlyBase G48714.1 TGAAAAGTGCGTGTCATAGCTATAAGAAGAAAATCGTAGTCAACTCTCGAAATGAGATGTAAAACCTTACTTAATGC 10 3932513 0.953773169 6 10 49 1 1.204119983 0.25 0.4 0.625 10 0 0 16 X:3932489-3932565 6 3.5 4362 FBgn0029685 940.7366667 30.01333333 45.98666667 0.003720489 0.116614838 0.076109017 0 0 0 0.15 dme-miR-190-5p 6mer3-8 ACATAT X 3939838 3939843 + X_3939838_3939843_+ 0.877553505 0.918773595 0.89816355 0.029147012 CG2941 FBtr0070613|FBtr0345711 3939668|3939668 3940006|3940582 X + 3939807 3939860 3'utr CG2941 FlyBase G58719.1 TGTCCTTTAAAAGGATGACTGTATGCACATAACATATGTACTACTGCCTTGCAA 14 3939843 0.978329834 3 14 99 1 1.255272505 0.166666667 0.214285714 0.388888889 14 0 0 18 X:3939807-3939860 6 CG2941 FBtr0070613|FBtr0345711 3939668|3939668 3940006|3940582 ACATAT 6mer3-8 dme-miR-190-5p X + 3939817 3939860 3'utr CG2941 FlyBase G44420.1 AAGGATGACTGTATGCACATAACATATGTACTACTGCCTTGCAA 10 3939843 0.975294405 2 10 66 1 1.079181246 0.083333333 0.2 0.333333333 10 0 0 12 X:3939817-3939860 6 11 4363 FBgn0029686 285.74 9.48 14.62333333 0.038496535 1.160337553 0.752222475 -5 -5 -5 0.15 dme-miR-1012-3p 7mer-A1 TGACTAA X 3953149 3953155 + X_3953149_3953155_+ 0.82334929 0.823334953 0.823342121 1.01E-05 Vap-33A FBtr0070618|FBtr0342739|FBtr0070617|FBtr0070616 3952921|3952921|3952921|3952921 3955442|3955442|3954086|3954086 X + 3953125 3953206 3'utr Vap-33A FlyBase G58731.1 AAACCACAGAGACGAATGTAAAGCTGACTAAACCGGGGACCGTATACATTTAAACGGTTGTATTGAAAATCAAAAATAATCA 19 3953149 0.930710976 6 18 69 0.95 0.977723605 0.1 0.052631579 0.1 19 0 1 19 X:3953125-3953206 7 Vap-33A FBtr0070616|FBtr0070617|FBtr0342739|FBtr0070618 3952921|3952921|3952921|3952921 3954086|3954086|3955442|3955442 TGACTAA 7mer-A1 dme-miR-1012-3p X + 3953131 3953176 3'utr Vap-33A FlyBase G44430.1 CAGAGACGAATGTAAAGCTGACTAAACCGGGGACCGTATACATTTA 9 3953149 0.941309821 4 6 24 0.8125 1.113943352 0.25 0.625 0.8125 8 3 0 13 X:3953131-3953176 7 12 4364 FBgn0029687 3606.676667 166.3933333 255.1133333 0.003327163 0.072118274 0.047037918 0 0 0 0.15 dme-miR-277-3p 7mer-m8 TGCATTT X 3953705 3953711 + X_3953705_3953711_+ 0.619660481 0.619482877 0.619571679 0.000125582 Vap-33A FBtr0070618|FBtr0342739|FBtr0070617|FBtr0070616 3952921|3952921|3952921|3952921 3955442|3955442|3954086|3954086 X + 3953689 3953727 3'utr Vap-33A FlyBase G58734.1 TGCTCAGATTTTCGATTGCATTTTTTCGCTATTATTAAT 11 3953704 0.812998988 2 11 138 1 1.113943352 0.153846154 0.181818182 0.307692308 11 0 0 13 X:3953689-3953727 7 Vap-33A FBtr0070616|FBtr0070617|FBtr0342739|FBtr0070618 3952921|3952921|3952921|3952921 3954086|3954086|3955442|3955442 TGCATTT 7mer-m8 dme-miR-277-3p X + 3953689 3953730 3'utr Vap-33A FlyBase G44433.1 TGCTCAGATTTTCGATTGCATTTTTTCGCTATTATTAATTTG 8 3953704 0.763923886 4 8 92 1 0.954242509 0.444444444 0.125 0.222222222 8 0 0 9 X:3953689-3953730 7 9 4365 FBgn0029687 3606.676667 166.3933333 255.1133333 0.002495372 0.054088705 0.035278438 1 1 1 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA X 3954292 3954299 + X_3954292_3954299_+ 0.623822472 0.621835153 0.622828812 0.001405233 Vap-33A FBtr0070618|FBtr0342739 3952921|3952921 3955442|3955442 X + 3954231 3954312 3'utr Vap-33A FlyBase G58735.1 CGCGGACGGCGGCTCTATATATACATATTTATATATAATCATTATTGTTTTGGTTGGCATTTGCATTTACTAAGTTTCGTTT 28 3954291 0.987945231 6 28 331 1 1.531478917 0.117647059 0.214285714 0.352941176 28 0 0 34 X:3954231-3954312 8 Vap-33A FBtr0342739|FBtr0070618 3952921|3952921 3955442|3955442 TGCATTTA 8mer-A1 dme-miR-277-3p X + 3954274 3954311 3'utr Vap-33A FlyBase G44434.1 ATTGTTTTGGTTGGCATTTGCATTTACTAAGTTTCGTT 10 3954291 0.7814271 3 10 113 1 1.113943352 0 0.3 0.461538462 10 0 0 13 X:3954274-3954311 8 17 4366 FBgn0029687 3606.676667 166.3933333 255.1133333 0.00471348 0.102167555 0.06663705 1 1 1 0.15 dme-miR-252-5p 6mer3-8 GTACTT X 3955039 3955044 + X_3955039_3955044_+ 0.997945845 0.999996206 0.998971025 0.001449852 Vap-33A FBtr0070618|FBtr0342739 3952921|3952921 3955442|3955442 X + 3955029 3955061 3'utr Vap-33A FlyBase G58738.1 TAAGCAAATTGTACTTGATGTCAGCTGTAGCAA 5 3955038 0.782655238 2 5 33 1 0.84509804 0 0.4 0.571428571 5 0 0 7 X:3955029-3955061 6 Vap-33A FBtr0342739|FBtr0070618 3952921|3952921 3955442|3955442 GTACTT 6mer3-8 dme-miR-252-5p X + 3955030 3955056 3'utr Vap-33A FlyBase G44435.1 AAGCAAATTGTACTTGATGTCAGCTGT 7 3955039 0.676958841 3 7 47 1 1.041392685 0.545454545 0.428571429 0.636363636 7 0 0 11 X:3955030-3955056 6 5.5 4367 FBgn0029687 3606.676667 166.3933333 255.1133333 0.00152495 0.033054209 0.021559046 1 0 0.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 3955716 3955721 - X_3955716_3955721_- 0.615860944 0.656880903 0.636370924 0.02900552 lva FBtr0342740|FBtr0070626 3955541|3955541 3955874|3955874 X - 3955650 3955784 3'utr lva FlyBase G64659.1 TCGATCCTGGCCTTCCTTGTGCGGACAATGGCAATAGCATTAGAGTTCTTTATACGATATTATGTACCTTGGCTAGCTAAAAAAAAAAGCTCATCCCCTTGGCCGTTCGAGCCGTATTCCCGATTTGTTCCAAAC 149 3955722 0.830515181 20 147 1000 0.988950276 2.252853031 0.270718232 0.174496644 0.320441989 149 2 0 179 X:3955650-3955784 6 lva FBtr0342740|FBtr0070626 3955541|3955541 3955874|3955874 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X - 3955662 3955731 3'utr lva FlyBase G48722.2 ACGATATTATGTACCTTGGCTAGCTAAAAAAAAAAGCTCATCCCCTTGGCCGTTCGAGCCGTATTCCCGA 70 3955722 0.828077528 6 66 456 0.952830189 2.004321374 0.29245283 0.4 0.603773585 70 5 0 101 X:3955662-3955731 6 50.5 4368 FBgn0029688 1838.776667 23.96333333 36.82333333 0.027463912 2.107386285 1.371413053 1 1 1 0.15 dme-miR-1006-3p 6mer2-7 GAATTT X 4098114 4098119 - X_4098114_4098119_- 0.961653022 0.972159629 0.966906325 0.007429288 CG6379 FBtr0343297|FBtr0070671 4097590|4097916 4098173|4098173 X - 4098104 4098143 3'utr CG6379 FlyBase G64690.1 AACTATACATAAGGATACATATGTGAATTTCCTTTTTTTT 12 4098116 0.782979903 6 10 102 0.846153846 1.041392685 0 0.083333333 0.153846154 12 2 0 11 X:4098104-4098143 6 CG6379 FBtr0343297|FBtr0070671 4097590|4097916 4098173|4098173 GAATTT 6mer2-7 dme-miR-1006-3p X - 4098110 4098137 3'utr CG6379 FlyBase G48744.1 ACATAAGGATACATATGTGAATTTCCTT 6 4098115 0.783096857 3 6 43 1 1 0.3 0.333333333 0.6 6 0 0 10 X:4098110-4098137 6 9 4369 FBgn0029693 315.06 11.47 17.60333333 0.028565987 0.784655623 0.511266806 -3 -4 -3.5 0.15 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA X 4105606 4105613 + X_4105606_4105613_+ 0.543851153 0.549315172 0.546583163 0.003863631 brn FBtr0070638 4105462 4105791 X + 4105551 4105634 3'utr brn FlyBase G58739.1 ATTAGGAGCAGTGGATGATACCTCAACCGTTCAGTGAGACTTTAAACCAAGCAGCTGGTGCTAATAGTGCAAGATCGCAAGAGT 25 4105615 0.974113365 6 22 132 0.888888889 1.380211242 0.148148148 0.125 0.222222222 24 3 0 24 X:4105551-4105634 8 brn FBtr0070638 4105462 4105791 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" X + 4105554 4105627 3'utr brn FlyBase G44436.1 AGGAGCAGTGGATGATACCTCAACCGTTCAGTGAGACTTTAAACCAAGCAGCTGGTGCTAATAGTGCAAGATCG 16 4105592 0.968687245 6 14 77 0.904761905 0.977723605 0.142857143 0.25 0.428571429 16 1 1 19 X:4105554-4105627 8 11 4370 FBgn0000221 55.33333333 4.63 7.023333333 0.198795181 2.375809935 1.566207879 -9 14 2.5 0.15 dme-bantam-3p 8mer-A1 TGATCTCA X 4115169 4115176 - X_4115169_4115176_- 0.630345928 0.626184302 0.628265115 0.002942696 Tip60 FBtr0333185 4114798 4115309 X - 4115113 4115189 5'utr Tip60 FlyBase G64713.1 AAAAAAGAGGACGTGATCTCAACGCTGCAGAACCTGAACCTGATCAACTACTACAAGGGCCAGTACATCGTGTGCAT 41 4115176 0.92780075 9 38 137 0.9375 1.352182518 0.166666667 0.146341463 0.270833333 41 2 1 45 X:4115113-4115189 8 Tip60 FBtr0333185 4114798 4115309 TGATCTCA 8mer-A1 dme-bantam-3p X - 4115128 4115189 5'utr Tip60 FlyBase G48758.1 AAAAAAGAGGACGTGATCTCAACGCTGCAGAACCTGAACCTGATCAACTACTACAAGGGCCA 16 4115176 0.952559721 3 15 50 0.964285714 1.431363764 0.178571429 0.5625 0.75 16 1 0 27 X:4115128-4115189 8 17 4371 FBgn0026080 257.65 13.78333333 21.11666667 0.065980982 1.23337364 0.805051302 0 0 0 0.15 dme-miR-965-3p 7mer-m8 TACGCTT X 4126243 4126249 + X_4126243_4126249_+ 0.620183362 0.584414599 0.60229898 0.025292361 tyf FBtr0301124|FBtr0345713|FBtr0305179|FBtr0305180|FBtr0070643|FBtr0305184|FBtr0305183|FBtr0305185 4125993|4125993|4125993|4125993|4125993|4125993|4125993|4125993 4128947|4130016|4128947|4128947|4126742|4128947|4128947|4126742 X + 4126230 4126297 3'utr tyf FlyBase G58758.1 ATTGCAATAATGATACGCTTTAATGCTAATTAATGTAACGAGTCGATAGCCGAACTATTGATTAACTT 11 4126243 0.853841916 5 11 76 1 1.146128036 0 0.272727273 0.428571429 11 0 0 14 X:4126230-4126297 7 tyf FBtr0305183|FBtr0305185|FBtr0070643|FBtr0305184|FBtr0305179|FBtr0305180|FBtr0301124|FBtr0345713 4125993|4125993|4125993|4125993|4125993|4125993|4125993|4125993 4128947|4126742|4126742|4128947|4128947|4128947|4128947|4130016 TACGCTT 7mer-m8 dme-miR-965-3p X + 4126190 4126293 3'utr tyf FlyBase G44450.1 TGTTTATATATCTACCGATATCGTACACACACTATATATTATTGCAATAATGATACGCTTTAATGCTAATTAATGTAACGAGTCGATAGCCGAACTATTGATTA 12 4126244 0.981882681 10 12 83 1 1.255272505 0.111111111 0.416666667 0.611111111 12 0 0 18 X:4126190-4126293 7 5 4372 FBgn0026083 3003.736667 42.11 64.35333333 0.001664593 0.118736642 0.077696053 0 -1 -0.5 0.15 dme-miR-317-3p 6mer3-8 TGTGTT X 4126872 4126877 + X_4126872_4126877_+ 0.744272086 0.850599784 0.797435935 0.075185038 tyf FBtr0301124|FBtr0345713|FBtr0305179|FBtr0305180|FBtr0305184|FBtr0305183 4125993|4125993|4125993|4125993|4125993|4125993 4128947|4130016|4128947|4128947|4128947|4128947 X + 4126771 4126883 3'utr tyf FlyBase G58762.1 TTTGGGCGCGTTGTTTGGAGGAAATCCTAATCCTAGATATTAAACCGAGTCAACGTCGCGTGTACATAGTGGACCAGAAGTCGTGTGGGCAGTTCGATCTCTGTGTTATGGAT 37 4126872 0.978892241 10 37 255 1 1.633468456 0.511627907 0.135135135 0.255813953 37 0 0 43 X:4126771-4126883 6 tyf FBtr0305183|FBtr0305184|FBtr0305179|FBtr0305180|FBtr0301124|FBtr0345713 4125993|4125993|4125993|4125993|4125993|4125993 4128947|4128947|4128947|4128947|4128947|4130016 TGTGTT 6mer3-8 dme-miR-317-3p X + 4126838 4126884 3'utr tyf FlyBase G44452.1 AGTGGACCAGAAGTCGTGTGGGCAGTTCGATCTCTGTGTTATGGATT 21 4126872 0.723513697 4 21 177 1 1.531478917 0.676470588 0.380952381 0.617647059 21 0 0 34 X:4126838-4126884 6 23.5 4373 FBgn0026083 3003.736667 42.11 64.35333333 0.007823589 0.558062218 0.365171449 0 0 0 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC X 4132323 4132329 + X_4132323_4132329_+ 0.551145315 0.545672247 0.548408781 0.003870066 GlcAT-I FBtr0070644 4132268 4132833 X + 4132240 4132359 stop_codon GlcAT-I FlyBase G58771.1 CAGCGATCCGATGGCGGCATGGAGGTCTAACCCGGGACCTAATTGTATATATAGCAAACTATCATCCTAGTGAATTTACTTAATGTGTTCCGTCTCCTCATAGTTTAGCCCCAATTTATT 99 4132327 0.990482047 16 89 903 0.903508772 2.012837225 0.043859649 0.121212121 0.236842105 99 11 0 103 X:4132240-4132359 7 GlcAT-I FBtr0070644 4132268 4132833 TGTGTTC 7mer-m8 dme-miR-317-3p X + 4132283 4132354 3'utr GlcAT-I FlyBase G44458.1 TGTATATATAGCAAACTATCATCCTAGTGAATTTACTTAATGTGTTCCGTCTCCTCATAGTTTAGCCCCAAT 61 4132327 0.989215843 10 56 543 0.927710843 1.886490725 0.024096386 0.278688525 0.469879518 61 6 0 77 X:4132283-4132354 7 66.5 4374 FBgn0066114 187.3333333 14.82333333 22.83333333 0.354982206 4.486170452 2.912408759 -4 -4 -4 0.15 dme-miR-305-3p 6mer2-7 TGTGCC X 4132786 4132791 + X_4132786_4132791_+ 0.999936709 0.998902411 0.99941956 0.000731361 GlcAT-I FBtr0070644 4132268 4132833 X + 4132747 4132800 3'utr GlcAT-I FlyBase G58774.1 TGGAGATTAGTTACATTAGATATACATAAGCTTCCCCTGTGTGCCTCCCAATTG 16 4132786 0.777590729 6 16 112 1 1.301029996 0.25 0.25 0.4 16 0 0 20 X:4132747-4132800 6 GlcAT-I FBtr0070644 4132268 4132833 TGTGCC 6mer2-7 dme-miR-305-3p X + 4132731 4132808 3'utr GlcAT-I FlyBase G44459.1 AGGTTTTGCAAATTGTTGGAGATTAGTTACATTAGATATACATAAGCTTCCCCTGTGTGCCTCCCAATTGACGCAAAT 16 4132787 0.693920892 8 15 132 0.96 1.380211242 0.12 0.375 0.6 16 1 0 24 X:4132731-4132808 6 11.5 4375 FBgn0066114 187.3333333 14.82333333 22.83333333 0.0613879 0.775803913 0.503649635 0 -1 -0.5 0.15 dme-miR-1012-3p 6mer3-8 TTGACT X 4371034 4371039 + X_4371034_4371039_+ 0.999993005 0.999998372 0.999995689 3.82E-06 CG3626 FBtr0070652 4370341 4371136 X + 4371017 4371066 3'utr CG3626 FlyBase G58804.1 TTTACTAACCCAGACGATTGACTTTGTAATTTATGGTGTGCTACTGTGTG 23 4371034 0.897441426 4 23 166 1 1.447158031 0.142857143 0.173913043 0.321428571 23 0 0 28 X:4371017-4371066 6 CG3626 FBtr0070652 4370341 4371136 TTGACT 6mer3-8 dme-miR-1012-3p X + 4371017 4371050 3'utr CG3626 FlyBase G44477.1 TTTACTAACCCAGACGATTGACTTTGTAATTTAT 18 4371035 0.751307921 3 17 122 0.95 1.278753601 0.05 0.111111111 0.2 18 1 0 19 X:4371017-4371050 6 20 4376 FBgn0029706 385.3333333 12.31666667 18.87333333 0.051903114 1.623815968 1.05969622 0 -1 -0.5 0.15 dme-miR-184-5p 8mer-A1 TGATAAGA X 4542395 4542402 + X_4542395_4542402_+ 0.591685665 0.517345345 0.554515505 0.052566601 CHOp24 FBtr0070675|FBtr0343566 4542055|4542055 4542438|4542506 X + 4542344 4542419 3'utr CHOp24 FlyBase G58809.1 CAGACACACATTCAAGGGGGGAAGAGACACTTGTGAACTTTCGAACTAAATTGATAAGAACCATTTGTTTTCTAAT 23 4542374 0.911277231 8 20 124 0.857142857 1.079181246 0.214285714 0.217391304 0.357142857 23 3 1 24 X:4542344-4542419 8 CHOp24 FBtr0070675|FBtr0343566 4542055|4542055 4542438|4542506 TGATAAGA 8mer-A1 dme-miR-184-5p X + 4542344 4542432 3'utr CHOp24 FlyBase G44481.1 CAGACACACATTCAAGGGGGGAAGAGACACTTGTGAACTTTCGAACTAAATTGATAAGAACCATTTGTTTTCTAATAAATGTAGGTTGA 19 4542375 0.9679442 8 17 105 0.892857143 0.920818754 0.214285714 0.473684211 0.642857143 19 1 2 25 X:4542344-4542432 8 6 4377 FBgn0029709 630.33 70.76 108.4966667 0.009518823 0.084793669 0.055301238 21 20 20.5 0.15 dme-miR-999-3p 6mer3-8 AGTTAA X 4553219 4553224 - X_4553219_4553224_- 0.963893655 0.995828797 0.979861226 0.022581526 CG11444 FBtr0070698|FBtr0343567 4553115|4553115 4553334|4553334 X - 4553213 4553246 3'utr CG11444 FlyBase G64747.1 CCTTTTGATGAACAGTGCAATTAGTTAAGCATAA 8 4553225 0.719776927 3 8 52 1 0.954242509 0.333333333 0.125 0.222222222 8 0 0 9 X:4553213-4553246 6 CG11444 FBtr0343567|FBtr0070698 4553115|4553115 4553334|4553334 AGTTAA 6mer3-8 dme-miR-999-3p X - 4553213 4553244 3'utr CG11444 FlyBase G48780.1 TTTTGATGAACAGTGCAATTAGTTAAGCATAA 5 4553225 0.727206407 3 5 36 1 0.903089987 0.25 0.4 0.625 5 0 0 8 X:4553213-4553244 6 6.5 4378 FBgn0029715 690.7566667 79.31666667 121.3466667 0.009409971 0.081949989 0.053565542 1 1 1 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 4638847 4638853 + X_4638847_4638853_+ 0.823348389 0.817604355 0.820476372 0.004061621 pon FBtr0070681 4638658 4639112 X + 4638831 4638859 3'utr pon FlyBase G58824.1 AAGTTTTTAATTGCACCCAAAGATTGTCA 5 4638842 0.7899537 3 5 27 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 X:4638831-4638859 7 pon FBtr0070681 4638658 4639112 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X + 4638813 4638861 3'utr pon FlyBase G44489.1 ATTTTTCAGCACCTAGTTAAGTTTTTAATTGCACCCAAAGATTGTCACA 8 4638854 0.985595571 4 5 48 0.5 0.84509804 0.357142857 0.25 0.571428571 8 7 0 7 X:4638813-4638861 7 6 4379 FBgn0025739 591.8333333 27.75666667 42.74666667 0.010137989 0.216164285 0.140361822 5 -7 -1 0.15 dme-miR-305-5p 8mer-A1 AGTACAAA X 4680590 4680597 - X_4680590_4680597_- 0.58438569 0.603428011 0.593906851 0.013464939 Pp2C1 FBtr0070685|FBtr0343531 4680402|4679986 4680631|4680631 X - 4680546 4680623 3'utr Pp2C1 FlyBase G64769.1 GTAACGAAACATGCGAGCAACTTGCAAGTACAAATCCTAAGCAACGGAAAATTTTAGATCCTAGTATACTACTTTACT 81 4680601 0.756303164 10 71 386 0.887640449 1.596597096 0.247191011 0.098765432 0.179775281 81 9 1 79 X:4680546-4680623 8 Pp2C1 FBtr0343531 4679986 4680631 AGTACAAA 8mer-A1 dme-miR-305-5p X - 4680539 4680645 stop_codon Pp2C1 FlyBase G48791.1 CGCGAAGGCGCTAGGCTAGATTGTAACGAAACATGCGAGCAACTTGCAAGTACAAATCCTAAGCAACGGAAAATTTTAGATCCTAGTATACTACTTTACTGAAAACG 54 4680601 0.956473552 11 50 241 0.855421687 1.851258349 0.277108434 0.425925926 0.626506024 54 12 0 71 X:4680539-4680645 8 58 4380 FBgn0022768 1391.28 29.69333333 45.54 0.04168823 1.953300404 1.273605621 4 4 4 0.15 dme-miR-2a-2-5p 6mer3-8 TGATGA X 4698733 4698738 + X_4698733_4698738_+ 0.999996126 0.999999987 0.999998056 2.76E-06 ctp FBtr0070707|FBtr0070704|FBtr0070706|FBtr0307065 4698457|4698457|4698457|4698457 4702034|4699456|4699456|4702034 X + 4698695 4698742 3'utr ctp FlyBase G58846.1 ACTACAACCACCAGTAGAACATCTCAAGGATGCGGAAATGATGACCGA 6 4698733 0.914335817 3 6 20 1 0.77815125 0.333333333 0 0 6 0 0 6 X:4698695-4698742 6 ctp FBtr0070706|FBtr0307065|FBtr0070707|FBtr0070704 4698457|4698457|4698457|4698457 4699456|4702034|4702034|4699456 TGATGA 6mer3-8 dme-miR-2a-2-5p X + 4698691 4698742 3'utr ctp FlyBase G44504.1 AAACACTACAACCACCAGTAGAACATCTCAAGGATGCGGAAATGATGACCGA 10 4698725 0.929377927 6 8 31 0.909090909 1 0.272727273 0.1 0.181818182 10 1 0 10 X:4698691-4698742 6 4.5 4381 FBgn0011760 8034.93 648.8766667 999.3333333 0.000560055 0.006935062 0.004503002 0 8 4 0.15 dme-miR-190-5p 6mer3-8 ACATAT X 4699410 4699415 + X_4699410_4699415_+ 0.74711892 0.518941756 0.633030338 0.161345575 ctp FBtr0070707|FBtr0070704|FBtr0070706|FBtr0307065 4698457|4698457|4698457|4698457 4702034|4699456|4699456|4702034 X + 4699368 4699429 3'utr ctp FlyBase G58851.1 CAAATGTTTTATGTGCTGGAGCTTTGTTTGGACTTTTGATTTACATATGAAACCTGCGCAAT 20 4699404 0.659604972 8 18 219 0.965517241 1.447158031 0.344827586 0.25 0.482758621 20 1 0 28 X:4699368-4699429 6 ctp FBtr0070706|FBtr0307065|FBtr0070707|FBtr0070704 4698457|4698457|4698457|4698457 4699456|4702034|4702034|4699456 ACATAT 6mer3-8 dme-miR-190-5p X + 4699369 4699453 3'utr ctp FlyBase G44508.2 AAATGTTTTATGTGCTGGAGCTTTGTTTGGACTTTTGATTTACATATGAAACCTGCGCAATTAAACAATTGTTAACAAGAAAAGA 15 4699403 0.95902528 9 13 116 0.791666667 0.801632346 0 0.533333333 0.708333333 15 3 2 19 X:4699369-4699453 6 5 4382 FBgn0011760 8034.93 648.8766667 999.3333333 0.000622283 0.007705625 0.005003336 6 7 6.5 0.15 dme-miR-283-5p 7mer-A1 GATATTA X 4705047 4705053 + X_4705047_4705053_+ 0.536740594 0.78232729 0.659533942 0.173656021 l(1)G0334 FBtr0070709|FBtr0070711|FBtr0070708|FBtr0070710 4704769|4704769|4704769|4704769 4705123|4705265|4705123|4705123 X + 4705028 4705110 3'utr l(1)G0334 FlyBase G58859.1 ACTCTGGGGTACTGCATTGGATATTATATTGCGAACGTGTTCAATAAGGATAAAGCGAGGTGTAAATTGTTGAAAATATAAAA 14 4705072 0.981481815 8 10 105 0.75 0.77815125 0.1875 0.142857143 0.25 14 3 1 12 X:4705028-4705110 7 l(1)G0334 FBtr0070710|FBtr0070708|FBtr0070711|FBtr0070709 4704769|4704769|4704769|4704769 4705123|4705123|4705265|4705123 GATATTA 7mer-A1 dme-miR-283-5p X + 4705017 4705075 3'utr l(1)G0334 FlyBase G44516.1 CGCACCACATAACTCTGGGGTACTGCATTGGATATTATATTGCGAACGTGTTCAATAAG 9 4705044 0.978292364 4 8 56 0.9 0.954242509 0.1 0.111111111 0.2 9 1 0 9 X:4705017-4705075 7 6 4383 FBgn0028325 2302.306667 161.7833333 248.5566667 0.002606082 0.037086639 0.024139365 -25 3 -11 0.15 dme-bantam-3p 6mer3-8 TGATCT X 482668 482673 + X_482668_482673_+ 0.999999883 0.99981264 0.999906262 0.000132441 CG3176 FBtr0336920|FBtr0343501 482436|482580 482768|482768 X + 482623 482697 3'utr CG3176 FlyBase G57740.1 AAAGAATATAGAGCTATATAGTATTTAACATTAGGCAAAAATCTTTGATCTATTCTTCGTTAGCGCTGTGCGAGT 15 482667 0.985099664 9 15 127 1 1.301029996 0.1 0.333333333 0.5 15 0 0 20 X:482623-482697 6 CG3176 FBtr0336920|FBtr0343501 482436|482580 482768|482768 TGATCT 6mer3-8 dme-bantam-3p X + 482655 482706 3'utr CG3176 FlyBase G43687.1 AGGCAAAAATCTTTGATCTATTCTTCGTTAGCGCTGTGCGAGTACTGCCAGA 13 482674 0.804898776 7 11 87 0.909090909 1.301029996 0.318181818 0.538461538 0.727272727 13 2 0 20 X:482655-482706 6 9.5 4384 FBgn0029524 104.6533333 24.39 37.14333333 0.090775895 0.389503895 0.255765952 1 -6 -2.5 0.15 dme-miR-317-3p 8mer-A1 TGTGTTCA X 490671 490678 + X_490671_490678_+ 0.631136782 0.631136783 0.631136782 0 CG3156 FBtr0070079 490570 490725 X + 490633 490684 3'utr CG3156 FlyBase G57746.1 TTGGTGGTGGACCAGCTAGTGCTATTGTTACCGGGATATGTGTTCATAAATC 11 490669 0.987272938 5 11 101 1 1.079181246 0.416666667 0.090909091 0.166666667 11 0 0 12 X:490633-490684 8 CG3156 FBtr0070079 490570 490725 TGTGTTCA 8mer-A1 dme-miR-317-3p X + 490618 490682 3'utr CG3156 FlyBase G43690.1 TGGCCCCACCGCTCCTTGGTGGTGGACCAGCTAGTGCTATTGTTACCGGGATATGTGTTCATAAA 14 490670 0.983922151 9 13 103 0.9 1.255272505 0.1 0.285714286 0.5 14 2 0 18 X:490618-490682 8 10.5 4385 FBgn0023536 204 10.62666667 16.39 0.051470588 0.988080301 0.640634533 2 1 1.5 0.15 dme-miR-79-3p 6mer3-8 TAGCTT X 4914175 4914180 + X_4914175_4914180_+ 0.996259195 0.999374915 0.997817055 0.002203133 CG32772 FBtr0342951|FBtr0343533|FBtr0300997|FBtr0342952 4914143|4914143|4914143|4914143 4914961|4915161|4914961|4915161 X + 4914138 4914256 stop_codon CG32772 FlyBase G58862.1 TAAGTAGGCTAGTTAAGAATGGAAAGAAGGTCTCTTTTAGCTTAAGCCCCGAACGATCAGCTGCTAAAGTCCCTGATTAGCATAGCCATAGCCAAAGTAGCATCACATTCAGCACATAC 64 4914173 0.977306137 8 63 413 0.971830986 1.838849091 0.154929577 0.109375 0.197183099 64 2 0 69 X:4914138-4914256 6 CG32772 FBtr0342952|FBtr0300997|FBtr0343533|FBtr0342951 4914143|4914143|4914143|4914143 4915161|4914961|4915161|4914961 TAGCTT 6mer3-8 dme-miR-79-3p X + 4914143 4914234 stop_codon CG32772 FlyBase G44518.1 AGGCTAGTTAAGAATGGAAAGAAGGTCTCTTTTAGCTTAAGCCCCGAACGATCAGCTGCTAAAGTCCCTGATTAGCATAGCCATAGCCAAAG 51 4914173 0.957867862 12 51 347 1 1.892094603 0.115384615 0.37254902 0.58974359 51 0 0 78 X:4914143-4914234 6 50.5 4386 FBgn0052772 546.74 21.57666667 33.00666667 0.092365658 2.340491271 1.529993941 2 2 2 0.15 dme-miR-14-3p 6mer3-8 AAGACT X 4921697 4921702 - X_4921697_4921702_- 0.998375685 0.999946918 0.999161302 0.001111006 CG44774 FBtr0343142 4921676 4927583 X - 4921685 4921777 3'utr CG44774 FlyBase G64792.1 AAACACAGAACCATACAAATTGTAGCCTTACAAACAGAAACAATTATTTATGTGTTAAGAGAACATGTTTTTGTAAAGACTAAATACAAATGA 29 4921705 0.956249217 11 28 189 0.96969697 1.505149978 0.03030303 0.137931034 0.242424242 29 1 0 32 X:4921685-4921777 6 CG44774 FBtr0343142 4921676 4927583 AAGACT 6mer3-8 dme-miR-14-3p X - 4921686 4921720 3'utr CG44774 FlyBase G48808.1 AGAGAACATGTTTTTGTAAAGACTAAATACAAATG 10 4921706 0.669483184 5 8 69 0.8125 0.812913357 0.375 0.5 0.6875 10 2 1 13 X:4921686-4921720 6 11 4387 FBgn0266000 3691.093333 67.20666667 103.37 0.002980147 0.163674239 0.106413853 3 4 3.5 0.15 dme-miR-8-3p 6mer3-8 CAGTAT X 4927350 4927355 - X_4927350_4927355_- 0.999999992 0.999999985 0.999999988 0 CG44774 FBtr0343138|FBtr0343140|FBtr0343142|FBtr0343141|FBtr0343139|FBtr0343136|FBtr0345209|FBtr0343135|FBtr0343137 4926662|4926662|4921676|4926662|4926662|4926662|4926662|4926662|4926662 4927583|4927583|4927583|4927583|4927583|4927583|4927583|4927583|4927583 X - 4927331 4927423 3'utr CG44774 FlyBase G64808.1 AATATTTAACATTTCAAGGAACACCTTAGCCTAGACGTTACTTTAGCCTAGACTAGAGCACTGAACTACAGTATGGGCGAATGAGTCCACGCA 60 4927357 0.83351416 14 42 276 0.683544304 1.431363764 0.113924051 0.216666667 0.405063291 60 24 1 54 X:4927331-4927423 6 CG44774 FBtr0343139|FBtr0343141|FBtr0343142|FBtr0343138|FBtr0343140|FBtr0343137|FBtr0343135|FBtr0345209|FBtr0343136 4926662|4926662|4921676|4926662|4926662|4926662|4926662|4926662|4926662 4927583|4927583|4927583|4927583|4927583|4927583|4927583|4927583|4927583 CAGTAT 6mer3-8 dme-miR-8-3p X - 4927331 4927522 3'utr CG44774 FlyBase G48826.1 AGTAACCACCCTGTTACGTTTGTTATACACTAAGCTATTTAACGGCGACCGAAAGCCAAGCTCCCTTCCTTAGCCGCAGGTTCCATATCATTCAAGAGTAATATTTAACATTTCAAGGAACACCTTAGCCTAGACGTTACTTTAGCCTAGACTAGAGCACTGAACTACAGTATGGGCGAATGAGTCCACGCA 100 4927357 0.875410259 24 87 483 0.887323944 1.799340549 0.084507042 0.32 0.521126761 100 15 1 126 X:4927331-4927522 6 36.5 4388 FBgn0266000 3691.093333 67.20666667 103.37 0.009888669 0.543100883 0.353100513 2 2 2 0.15 dme-miR-11-3p 8mer-m1 CTGTGATG X 4955091 4955098 + X_4955091_4955098_+ 0.461225068 0.458579188 0.459902128 0.001870934 Ptp4E FBtr0301796|FBtr0343529|FBtr0070724|FBtr0301794|FBtr0343528|FBtr0301793 4954603|4954603|4954603|4954603|4955001|4954603 4955916|4955425|4955916|4955916|4955916|4955916 X + 4955068 4955111 3'utr Ptp4E FlyBase G58878.1 CATATACTATACGTAAAATCTGCCTGTGATGTGCTGGATGTGAT 54 4955088 0.758107803 8 45 393 0.887096774 1.439332694 0.35483871 0.111111111 0.225806452 54 6 1 55 X:4955068-4955111 8 Ptp4E FBtr0301793|FBtr0343528|FBtr0301794|FBtr0070724|FBtr0343529|FBtr0301796 4954603|4955001|4954603|4954603|4954603|4954603 4955916|4955916|4955916|4955916|4955425|4955916 CTGTGATG 8mer-m1 dme-miR-11-3p X + 4955069 4955144 3'utr Ptp4E FlyBase G44535.1 ATATACTATACGTAAAATCTGCCTGTGATGTGCTGGATGTGATTTGTCTACGAAGTGGCACTCGGAGTTGCTGTCA 49 4955087 0.982916455 9 45 374 0.915492958 1.511883361 0.436619718 0.346938776 0.549295775 49 5 1 65 X:4955069-4955144 8 49.5 4389 FBgn0004368 1052.996667 19.90333333 30.39 0.047008696 2.4870206 1.628825271 3 4 3.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 4955401 4955406 + X_4955401_4955406_+ 0.953955322 0.813223729 0.883589526 0.099512269 Ptp4E FBtr0301796|FBtr0343529|FBtr0070724|FBtr0301794|FBtr0343528|FBtr0301793 4954603|4954603|4954603|4954603|4955001|4954603 4955916|4955425|4955916|4955916|4955916|4955916 X + 4955345 4955418 3'utr Ptp4E FlyBase G58879.1 GCTTCAGGTTTAACAATCTGCTACCTATTTTTGTATCTGTACCTACCTGTATCCCTGTACCTACTGTATAACTA 40 4955400 0.984366928 7 40 319 1 1.698970004 0.08 0.225 0.38 40 0 0 50 X:4955345-4955418 6 Ptp4E FBtr0301793|FBtr0343528|FBtr0301794|FBtr0070724|FBtr0343529|FBtr0301796 4954603|4955001|4954603|4954603|4954603|4954603 4955916|4955916|4955916|4955916|4955425|4955916 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X + 4955375 4955413 3'utr Ptp4E FlyBase G44536.1 TTGTATCTGTACCTACCTGTATCCCTGTACCTACTGTAT 22 4955400 0.79657405 3 21 168 0.971428571 1.531478917 0.228571429 0.409090909 0.628571429 22 1 0 34 X:4955375-4955413 6 26.5 4390 FBgn0004368 1052.996667 19.90333333 30.39 0.025166271 1.33143527 0.871997368 1 1 1 0.15 dme-miR-276a-3p 6mer2-7 GTTCCT X 503367 503372 + X_503367_503372_+ 0.999229636 0.999968252 0.999598944 0.00052234 svr FBtr0070086|FBtr0070085|FBtr0344737|FBtr0340146 502970|502970|502970|502970 504319|504319|504319|504319 X + 503331 503427 5'utr svr FlyBase G57756.1 TTTTTCGCATTTTCATACGCTTATATGCCAGCCTATGTTCCTTCCACGCCATTACTTCAGACGCGCACATATTTAGTGGATGCTTGATTTGTATATA 24 503368 0.963464403 7 21 187 0.888888889 1.380211242 0.148148148 0.125 0.222222222 24 3 0 24 X:503331-503427 6 svr FBtr0070085|FBtr0344737|FBtr0340146|FBtr0070086 502970|502970|502970|502970 504319|504319|504319|504319 GTTCCT 6mer2-7 dme-miR-276a-3p X + 503353 503391 5'utr svr FlyBase G43698.1 ATATGCCAGCCTATGTTCCTTCCACGCCATTACTTCAGA 12 503368 0.975682759 4 12 79 1 1.322219295 0.047619048 0.5 0.714285714 12 0 0 21 X:503353-503391 6 13 4391 FBgn0004648 2059.716667 56.39666667 86.34666667 0.006311548 0.230510077 0.150555899 -1 -1 -1 0.15 dme-miR-252-5p 8mer-m1 GTACTTAG X 503506 503513 + X_503506_503513_+ 0.636324454 0.636387627 0.636356041 4.46E-05 svr FBtr0070086|FBtr0070085|FBtr0344737|FBtr0340146 502970|502970|502970|502970 504319|504319|504319|504319 X + 503489 503549 5'utr svr FlyBase G57757.1 AAGGAAATAAGCGAATTGTACTTAGGCAATATGCAGAAATTGGCCCACTTATGGTCATCGA 12 503505 0.983825368 3 11 59 0.916666667 1.041392685 0 0 0 12 1 0 11 X:503489-503549 8 svr FBtr0070085|FBtr0344737|FBtr0340146|FBtr0070086 502970|502970|502970|502970 504319|504319|504319|504319 GTACTTAG 8mer-m1 dme-miR-252-5p X + 503479 503539 5'utr svr FlyBase G43699.1 GAAATAAATTAAGGAAATAAGCGAATTGTACTTAGGCAATATGCAGAAATTGGCCCACTTA 7 503505 0.95680301 3 6 32 1 0.954242509 0.444444444 0.142857143 0.333333333 7 0 0 9 X:503479-503539 8 6.5 4392 FBgn0004648 2059.716667 56.39666667 86.34666667 0.003155774 0.115255039 0.075277949 1 1 1 0.15 dme-miR-304-5p 7mer-A1 GAGATTA X 5069248 5069254 + X_5069248_5069254_+ 0.823349542 0.823349476 0.823349509 0 ovo FBtr0070738|FBtr0301914|FBtr0100408|FBtr0070739|FBtr0070740 5069079|5069079|5069079|5069079|5069079 5070772|5070929|5070772|5070929|5070929 X + 5069226 5069274 3'utr ovo FlyBase G58886.1 TGCGGAGGATACGGAATTATTGGAGATTATGCTTATTATGTATATTTTT 29 5069251 0.989747065 3 29 293 1 1.579783597 0.289473684 0.24137931 0.421052632 29 0 0 38 X:5069226-5069274 7 ovo FBtr0070740|FBtr0100408|FBtr0070739|FBtr0070738|FBtr0301914 5069079|5069079|5069079|5069079|5069079 5070929|5070772|5070929|5070772|5070929 GAGATTA 7mer-A1 dme-miR-304-5p X + 5069236 5069272 3'utr ovo FlyBase G44541.1 ACGGAATTATTGGAGATTATGCTTATTATGTATATTT 18 5069252 0.767705229 4 18 181 1 1.380211242 0 0.277777778 0.458333333 18 0 0 24 X:5069236-5069272 7 23.5 4393 FBgn0003028 7.666666667 0.146666667 0.23 3.065217391 160.2272727 102.173913 -3 -4 -3.5 0.15 dme-miR-1008-3p 6mer2-7 GCTGTG X 5069352 5069357 + X_5069352_5069357_+ 0.999326228 0.99939709 0.999361659 5.01E-05 ovo FBtr0070738|FBtr0301914|FBtr0100408|FBtr0070739|FBtr0070740 5069079|5069079|5069079|5069079|5069079 5070772|5070929|5070772|5070929|5070929 X + 5069317 5069370 3'utr ovo FlyBase G58887.1 AGTACCCACTGTATCATGCTACCCCACTTCACTTTGCTGTGCAAATCTCTCTCA 19 5069350 0.985975946 5 19 160 1 1.342422681 0 0.157894737 0.272727273 19 0 0 22 X:5069317-5069370 6 ovo FBtr0070740|FBtr0100408|FBtr0070739|FBtr0070738|FBtr0301914 5069079|5069079|5069079|5069079|5069079 5070929|5070772|5070929|5070772|5070929 GCTGTG 6mer2-7 dme-miR-1008-3p X + 5069332 5069371 3'utr ovo FlyBase G44542.1 ATGCTACCCCACTTCACTTTGCTGTGCAAATCTCTCTCAC 6 5069350 0.982469194 2 5 57 0.888888889 0.903089987 0 0.333333333 0.555555556 6 1 0 8 X:5069332-5069371 6 11.5 4394 FBgn0003028 7.666666667 0.146666667 0.23 1.5 78.40909091 50 2 2 2 0.15 dme-bantam-3p 6mer3-8 TGATCT X 5069937 5069942 + X_5069937_5069942_+ 0.999994998 0.999725376 0.999860187 0.000190636 ovo FBtr0070738|FBtr0301914|FBtr0100408|FBtr0070739|FBtr0070740 5069079|5069079|5069079|5069079|5069079 5070772|5070929|5070772|5070929|5070929 X + 5069919 5069958 3'utr ovo FlyBase G58888.1 AATCGAATCGCGAGAATATGATCTACTGAATATATAGTTT 15 5069937 0.705586519 2 14 94 1 1.278753601 0.105263158 0.266666667 0.421052632 15 0 0 19 X:5069919-5069958 6 ovo FBtr0070740|FBtr0100408|FBtr0070739|FBtr0070738|FBtr0301914 5069079|5069079|5069079|5069079|5069079 5070929|5070772|5070929|5070772|5070929 TGATCT 6mer3-8 dme-bantam-3p X + 5069914 5069953 3'utr ovo FlyBase G44543.1 TGGAAAATCGAATCGCGAGAATATGATCTACTGAATATAT 11 5069937 0.958003785 4 11 62 1 1.230448921 0.176470588 0.363636364 0.588235294 11 0 0 17 X:5069914-5069953 6 12.5 4395 FBgn0003028 7.666666667 0.146666667 0.23 1.630434783 85.22727273 54.34782609 0 0 0 0.15 dme-bantam-3p 6mer3-8 TGATCT X 5069998 5070003 + X_5069998_5070003_+ 0.999978603 0.999999981 0.999989292 1.51E-05 ovo FBtr0070738|FBtr0301914|FBtr0100408|FBtr0070739|FBtr0070740 5069079|5069079|5069079|5069079|5069079 5070772|5070929|5070772|5070929|5070929 X + 5069978 5070016 3'utr ovo FlyBase G58889.1 GGCAATACCACCAATTGTACTGATCTTTAATGAACAAAC 7 5070005 0.764810314 5 7 55 1 0.903089987 0 0.142857143 0.25 7 0 0 8 X:5069978-5070016 6 ovo FBtr0070740|FBtr0100408|FBtr0070739|FBtr0070738|FBtr0301914 5069079|5069079|5069079|5069079|5069079 5070929|5070772|5070929|5070772|5070929 TGATCT 6mer3-8 dme-bantam-3p X + 5069977 5070010 3'utr ovo FlyBase G44544.1 AGGCAATACCACCAATTGTACTGATCTTTAATGA 5 5069995 0.980426113 4 5 37 1 0.903089987 0.25 0.4 0.625 5 0 0 8 X:5069977-5070010 6 6 4396 FBgn0003028 7.666666667 0.146666667 0.23 0.782608696 40.90909091 26.08695652 -7 3 -2 0.15 dme-miR-8-3p 8mer-A1 CAGTATTA X 5072734 5072741 - X_5072734_5072741_- 0.588709675 0.566115945 0.57741281 0.015976229 CG32767 FBtr0331758 5071025 5077136 X - 5072729 5072776 3'utr CG32767 FlyBase G64823.1 CGTATTTATACACTATGAATGTCTAGTCGTATTTTCAGTATTATGTAA 21 5072744 0.655660895 8 20 228 0.961538462 1.397940009 0.076923077 0.142857143 0.307692308 21 1 0 25 X:5072729-5072776 8 CG32767 FBtr0331758 5071025 5077136 CAGTATTA 8mer-A1 dme-miR-8-3p X - 5072730 5072771 3'utr CG32767 FlyBase G48842.1 TTATACACTATGAATGTCTAGTCGTATTTTCAGTATTATGTA 12 5072757 0.842752395 4 9 113 0.785714286 0.740362689 0 0.166666667 0.285714286 12 2 1 11 X:5072730-5072771 8 1 4397 FBgn0052767 1383.503333 20.81666667 32.11666667 0.000722803 0.048038431 0.031136482 3 16 9.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 5072749 5072755 - X_5072749_5072755_- 0.323516296 0.631903797 0.477710046 0.218062892 CG32767 FBtr0331758 5071025 5077136 X - 5072729 5072776 3'utr CG32767 FlyBase G64823.1 CGTATTTATACACTATGAATGTCTAGTCGTATTTTCAGTATTATGTAA 21 5072744 0.655660895 8 20 228 0.961538462 1.397940009 0.076923077 0.142857143 0.307692308 21 1 0 25 X:5072729-5072776 7 CG32767 FBtr0331758 5071025 5077136 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X - 5072730 5072771 3'utr CG32767 FlyBase G48842.1 TTATACACTATGAATGTCTAGTCGTATTTTCAGTATTATGTA 12 5072757 0.842752395 4 9 113 0.785714286 0.740362689 0 0.166666667 0.285714286 12 2 1 11 X:5072730-5072771 7 6.5 4398 FBgn0052767 1383.503333 20.81666667 32.11666667 0.004698218 0.3122498 0.20238713 -11 2 -4.5 0.15 dme-miR-13b-2-5p 6mer3-8 TTTGAC X 5075251 5075256 - X_5075251_5075256_- 0.997644805 0.999976209 0.998810507 0.001648549 CG32767 FBtr0331757|FBtr0302118|FBtr0302119|FBtr0300995|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 X - 5075183 5075293 3'utr CG32767 FlyBase G64827.1 TCTTATGTGCAATCTCCCCCCATCACTGAAACTGAACTTTGACCTCTTTCTCACCTTCGCTCGAACACCTTGTGGTTTCCTTAATTAGTTGCTAAGTATCCACGATAAACA 43 5075255 0.950771816 12 40 338 0.943396226 1.698970004 0.264150943 0.23255814 0.377358491 43 3 0 50 X:5075183-5075293 6 CG32767 FBtr0300995|FBtr0302119|FBtr0302118|FBtr0331757|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 TTTGAC 6mer3-8 dme-miR-13b-2-5p X - 5075202 5075304 3'utr CG32767 FlyBase G48846.1 TTTTTAAAAGTTCTTATGTGCAATCTCCCCCCATCACTGAAACTGAACTTTGACCTCTTTCTCACCTTCGCTCGAACACCTTGTGGTTTCCTTAATTAGTTGC 34 5075255 0.90333967 14 30 282 0.849056604 1.653212514 0.264150943 0.441176471 0.641509434 34 8 0 45 X:5075202-5075304 6 19 4399 FBgn0052767 1383.503333 20.81666667 32.11666667 0.013733252 0.912730184 0.59159315 -1 -1 -1 0.15 dme-bantam-3p 7mer-m8 TGATCTC X 5075689 5075695 - X_5075689_5075695_- 0.649366312 0.64369859 0.646532451 0.004007669 CG32767 FBtr0331757|FBtr0302118|FBtr0302119|FBtr0300995|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 X - 5075544 5075720 3'utr CG32767 FlyBase G64829.1 AATTTTAGTTGTATAGTTTTGCATTTGATCTCTCGGCTTTAGTTTTTGCATTCAAAGCGAAAGAAAATTCAGTTCCTGTGTAATTGCAAAGATAACTTGAGAAATTGTATTATAATTTAATGGACTAGGCAATCAATGTGCTGCTTTCATGCGGAAAGATATGCATATATGTATGAA 302 5075696 0.987367697 35 289 3392 0.959128065 1.944482672 0.108991826 0.185430464 0.329700272 302 12 3 352 X:5075544-5075720 7 CG32767 FBtr0300995|FBtr0302119|FBtr0302118|FBtr0331757|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 TGATCTC 7mer-m8 dme-bantam-3p X - 5075671 5075720 3'utr CG32767 FlyBase G48849.1 AATTTTAGTTGTATAGTTTTGCATTTGATCTCTCGGCTTTAGTTTTTGCA 181 5075696 0.708418765 13 173 2079 0.96 2.421603927 0.101818182 0.397790055 0.603636364 181 11 0 264 X:5075671-5075720 7 219.5 4400 FBgn0052767 1383.503333 20.81666667 32.11666667 0.158655201 10.54443555 6.834457706 1 1 1 0.15 dme-miR-1003-3p 6mer3-8 ATGTGA X 5075844 5075849 - X_5075844_5075849_- 0.999999841 0.999999297 0.999999569 3.54E-07 CG32767 FBtr0331757|FBtr0302118|FBtr0302119|FBtr0300995|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 X - 5075834 5075897 3'utr CG32767 FlyBase G64831.1 TAGTGTAAAAAAAAAAATGAAGAAAATCTCAAATGAACTTGTAACTTGATGTGAAACACGAATT 15 5075851 0.970654228 6 14 82 1 1.255272505 0.166666667 0.2 0.333333333 15 0 0 18 X:5075834-5075897 6 CG32767 FBtr0300995|FBtr0302119|FBtr0302118|FBtr0331757|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 ATGTGA 6mer3-8 dme-miR-1003-3p X - 5075830 5075865 3'utr CG32767 FlyBase G48851.1 ATGAACTTGTAACTTGATGTGAAACACGAATTGTTT 9 5075849 0.991305702 5 6 57 0.727272727 0.602059991 0.090909091 0.222222222 0.363636364 9 2 1 8 X:5075830-5075865 6 8 4401 FBgn0052767 1383.503333 20.81666667 32.11666667 0.005782422 0.384307446 0.249091853 2 0 1 0.15 dme-bantam-3p 6mer3-8 TGATCT X 5075934 5075939 - X_5075934_5075939_- 0.999997585 0.999998704 0.999998144 7.78E-07 CG32767 FBtr0331757|FBtr0302118|FBtr0302119|FBtr0300995|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 X - 5075922 5075978 3'utr CG32767 FlyBase G64832.1 TGCTCTCGTGCCCTCTCTGTCACTGTCCCCATCTCACTCTGATCTGTTTATAAGAAG 42 5075940 0.789367719 10 39 418 0.931818182 1.311753861 0.181818182 0.047619048 0.090909091 42 2 1 41 X:5075922-5075978 6 CG32767 FBtr0300995|FBtr0302119|FBtr0302118|FBtr0331757|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 TGATCT 6mer3-8 dme-bantam-3p X - 5075925 5075956 3'utr CG32767 FlyBase G48852.1 CTGTCCCCATCTCACTCTGATCTGTTTATAAG 12 5075939 0.763357932 4 12 116 1 1.204119983 0 0.25 0.4375 12 0 0 16 X:5075925-5075956 6 24 4402 FBgn0052767 1383.503333 20.81666667 32.11666667 0.017347266 1.152922338 0.747275558 1 0 0.5 0.15 dme-miR-184-5p 6mer3-8 TGATAA X 513577 513582 - X_513577_513582_- 0.875925275 0.72574385 0.800834562 0.106194357 elav FBtr0307173 509233 517791 X - 513524 513587 3'utr elav FlyBase G63819.1 GCTTATGATAAATGAATCTCATAGTTTAGTTTAGCGGAGGAAGTACGGCCACCTCTCCCTTAAT 35 513575 0.992163917 10 28 314 0.794871795 1.190331698 0.307692308 0.114285714 0.205128205 35 7 1 31 X:513524-513587 6 elav FBtr0307173 509233 517791 TGATAA 6mer3-8 dme-miR-184-5p X - 513544 513594 3'utr elav FlyBase G48107.1 GTTTAGCGCTTATGATAAATGAATCTCATAGTTTAGTTTAGCGGAGGAAGT 47 513575 0.915588065 6 35 427 0.77027027 1.45484486 0.22972973 0.404255319 0.621621622 47 16 1 57 X:513544-513594 6 25.5 4403 FBgn0260400 1799.413333 52.41 80.75 0.014171285 0.486548369 0.315789474 -7 -7 -7 0.15 dme-bantam-3p 8mer-A1 TGATCTCA X 513791 513798 - X_513791_513798_- 0.629955409 0.630633026 0.630294218 0.000479136 elav FBtr0307173 509233 517791 X - 513711 513820 3'utr elav FlyBase G63820.1 AAGAGGTGCCATCGGAATCCGTTGATCTCAGCTAAAAAGACATCCCCAGACATTCCCAGTCGTGTTTGGTTTAGTCCTCGTAACTCCACGATTTAAGGGGGTATCCCCCG 76 513799 0.967675496 10 76 417 1 1.995635195 0.191919192 0.263157895 0.434343434 76 0 0 99 X:513711-513820 8 elav FBtr0307173 509233 517791 TGATCTCA 8mer-A1 dme-bantam-3p X - 513761 513820 3'utr elav FlyBase G48109.1 AAGAGGTGCCATCGGAATCCGTTGATCTCAGCTAAAAAGACATCCCCAGACATTCCCAGT 47 513799 0.970093052 7 45 255 0.966666667 1.763427994 0.266666667 0.234042553 0.4 47 2 0 58 X:513761-513820 8 59 4404 FBgn0260400 1799.413333 52.41 80.75 0.032788464 1.125739363 0.730650155 1 1 1 0.15 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 513834 513841 - X_513834_513841_- 0.63097102 0.630759235 0.630865127 0.000149765 elav FBtr0307173 509233 517791 X - 513821 513878 3'utr elav FlyBase G63821.1 TCCTCTGACAGTCACATGAAGAAGATGAAGGAATCGATCTAGTCAAGGCCCATCTAAC 44 513841 0.702031632 6 36 174 0.823529412 0.924279286 0.352941176 0.159090909 0.274509804 44 5 4 42 X:513821-513878 8 elav FBtr0307173 509233 517791 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X - 513821 513859 3'utr elav FlyBase G48110.1 AGAAGATGAAGGAATCGATCTAGTCAAGGCCCATCTAAC 24 513841 0.662849714 4 22 89 0.918918919 1.054357662 0.27027027 0.375 0.594594595 24 1 2 34 X:513821-513859 8 31.5 4405 FBgn0260400 1799.413333 52.41 80.75 0.017505706 0.601030338 0.390092879 0 0 0 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 514231 514236 - X_514231_514236_- 0.999999799 1.000000001 0.9999999 1.41E-07 elav FBtr0307173|FBtr0307173|FBtr0307173 509233|509233|509233 517791|517791|517791 X - 514210 514247 3'utr elav FlyBase G63822.1 ACTGCAAACTCCTGTGAATTCTATCGAATGAATATTTA 17 514229 0.629703102 5 16 112 0.958333333 1.361727836 0.041666667 0.294117647 0.5 17 1 0 23 X:514210-514247 6 elav FBtr0307173|FBtr0307173|FBtr0307173 509233|509233|509233 517791|517791|517791 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X - 514211 514288 3'utr elav FlyBase G48111.1 TTTAGTTGATATTCTAGCTATATACGATCTGTGCGTATGTTACTGCAAACTCCTGTGAATTCTATCGAATGAATATTT 13 514238 0.982575278 6 12 97 0.894736842 0.753327667 0.263157895 0.384615385 0.578947368 13 0 2 17 X:514211-514288 6 13.5 4406 FBgn0260400 1799.413333 52.41 80.75 0.007502445 0.25758443 0.167182663 -7 2 -2.5 0.15 dme-miR-970-3p 8mer-A1 TCTTATGA X 514965 514972 - X_514965_514972_- 0.376740571 0.411627685 0.394184128 0.024668905 elav FBtr0307173 509233 517791 X - 514932 515082 3'utr elav FlyBase G63825.1 ATTGTGCAATAGTTTTAAAATGCAACTGAAGGCAAAACACAACAACAAATTTTCAAGTATCTCAAATTATAATTTCATTAGGCGAGGAAAACGAGAAATGAAATATTTGATCTTATGAAACATAATTGTATGATTACTCTATACACACCGC 48 514975 0.929408603 18 43 357 0.909090909 1.22184875 0.2 0.145833333 0.254545455 48 3 2 50 X:514932-515082 8 elav FBtr0307173 509233 517791 TCTTATGA 8mer-A1 dme-miR-970-3p X - 514936 514985 3'utr elav FlyBase G48113.1 ATGAAATATTTGATCTTATGAAACATAATTGTATGATTACTCTATACACA 13 514975 0.987028335 6 9 104 0.705882353 1.079181246 0.235294118 0.307692308 0.470588235 13 5 0 12 X:514936-514985 8 18 4407 FBgn0260400 1799.413333 52.41 80.75 0.01000326 0.343445907 0.222910217 3 3 3 0.15 dme-miR-33-5p 7mer-A1 AATGCAA X 515058 515064 - X_515058_515064_- 0.62589922 0.773457626 0.699678423 0.104339545 elav FBtr0307173 509233 517791 X - 514932 515082 3'utr elav FlyBase G63825.1 ATTGTGCAATAGTTTTAAAATGCAACTGAAGGCAAAACACAACAACAAATTTTCAAGTATCTCAAATTATAATTTCATTAGGCGAGGAAAACGAGAAATGAAATATTTGATCTTATGAAACATAATTGTATGATTACTCTATACACACCGC 48 515057 0.929408603 18 43 357 0.909090909 1.22184875 0.2 0.145833333 0.254545455 48 3 2 50 X:514932-515082 7 elav FBtr0307173 509233 517791 AATGCAA 7mer-A1 dme-miR-33-5p X - 514991 515121 3'utr elav FlyBase G48114.1 TTGTCACCGATGATCAAATTAATTGTATTAATTATAATTATTGTGCAATAGTTTTAAAATGCAACTGAAGGCAAAACACAACAACAAATTTTCAAGTATCTCAAATTATAATTTCATTAGGCGAGGAAAAC 19 515056 0.999365495 12 19 123 1 1.491361694 0.032258065 0.368421053 0.612903226 19 0 0 31 X:514991-515121 7 8 4408 FBgn0260400 1799.413333 52.41 80.75 0.004445893 0.152642625 0.099071207 -7 -8 -7.5 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 515404 515410 - X_515404_515410_- 0.823280341 0.823228 0.82325417 3.70E-05 elav FBtr0307173 509233 517791 X - 515397 515433 3'utr elav FlyBase G63829.1 AGAAGCCGCCTGCTCTTCCCTTTCCAAAGATTTACCC 23 515412 0.78318523 3 23 194 1 1.397940009 0.12 0.086956522 0.16 23 0 0 25 X:515397-515433 7 elav FBtr0307173 509233 517791 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X - 515397 515489 3'utr elav FlyBase G48116.1 TCAAAACCAAAAGAACTATGGCAATTTCTAGCTAATAAAATGATTGAATGATTGATAGAAGCCGCCTGCTCTTCCCTTTCCAAAGATTTACCC 20 515412 0.980244575 7 20 145 1 1.491361694 0.064516129 0.4 0.612903226 20 0 0 31 X:515397-515489 7 17 4409 FBgn0260400 1799.413333 52.41 80.75 0.009447524 0.324365579 0.210526316 2 2 2 0.15 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 515551 515558 - X_515551_515558_- 0.629380774 0.629197342 0.629289058 0.000129754 elav FBtr0307173 509233 517791 X - 515489 515576 3'utr elav FlyBase G63830.1 AAAATTCGCAACAAGAACTCTAGTCAGAAGATGGAAAACAAGAATATTATTATGATGAGGCAGCCGCATATAAGGAGGAATAGTAGAT 76 515558 0.903199156 10 70 284 0.947916667 1.481920138 0.09375 0.223684211 0.385416667 76 3 2 91 X:515489-515576 8 elav FBtr0307173 509233 517791 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X - 515540 515580 3'utr elav FlyBase G48117.2 GAACAAAATTCGCAACAAGAACTCTAGTCAGAAGATGGAAA 43 515558 0.84046978 4 33 131 0.845070423 1.176091259 0.169014085 0.348837209 0.605633803 43 8 3 60 X:515540-515580 8 48 4410 FBgn0260400 1799.413333 52.41 80.75 0.026675361 0.915855753 0.594427245 0 0 0 0.15 dme-miR-282-5p 6mer2-7 GAGGCT X 516919 516924 - X_516919_516924_- 0.991806389 0.990541934 0.991174161 0.000894137 elav FBtr0100254|FBtr0307173 516848|509233 517791|517791 X - 516891 516955 3'utr elav FlyBase G63833.1 GCGCATATAATAGGTATATATGCATAACATGGAGGCTGCTACAGTATTACAAGAAACATAAAAAT 390 516926 0.929410632 6 387 2004 0.993670886 2.371990911 0.276371308 0.171794872 0.318565401 390 2 1 471 X:516891-516955 6 elav FBtr0100254|FBtr0307173 516848|509233 517791|517791 GAGGCT 6mer2-7 dme-miR-282-5p X - 516874 516948 3'utr elav FlyBase G48118.1 TAATAGGTATATATGCATAACATGGAGGCTGCTACAGTATTACAAGAAACATAAAAATTAAAACTATATACTTAA 277 516926 0.959733538 5 272 1329 0.979498861 2.33243846 0.277904328 0.375451264 0.605922551 277 8 1 430 X:516874-516948 6 332.5 4411 FBgn0260400 1799.413333 52.41 80.75 0.184782448 6.34420912 4.117647059 2 2 2 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT X 517345 517351 - X_517345_517351_- 0.594047258 0.627804059 0.610925658 0.023869662 elav FBtr0114366|FBtr0070091|FBtr0100254|FBtr0307173 517234|517234|516848|509233 517791|517791|517791|517791 X - 517334 517368 3'utr elav FlyBase G63835.1 AAACACACTGTGGCAGTGGCAGCTGTGAAAGGTCA 24 517352 0.886232298 4 23 100 0.9375 1 0.09375 0.25 0.4375 24 0 2 30 X:517334-517368 7 elav FBtr0114366|FBtr0070091|FBtr0100254|FBtr0307173 517234|517234|516848|509233 517791|517791|517791|517791 GGCAGCT 7mer-m8 dme-miR-980-3p X - 517294 517367 3'utr elav FlyBase G48119.1 AACACACTGTGGCAGTGGCAGCTGTGAAAGGTCAAAGGTTGGCACAGTCGATCTAGTCACAAAGCAAAACAAAG 18 517352 0.956633838 6 17 80 0.857142857 1.380211242 0.392857143 0.333333333 0.571428571 18 4 0 24 X:517294-517367 7 17 4412 FBgn0260400 1799.413333 52.41 80.75 0.009447524 0.324365579 0.210526316 1 1 1 0.15 dme-miR-305-5p 7mer-A1 GTACAAA X 5319001 5319007 - X_5319001_5319007_- 0.764858567 0.762298711 0.763578639 0.001810123 Rnp4F FBtr0070753|FBtr0112876|FBtr0340477|FBtr0070752 5318926|5318926|5318926|5318926 5319135|5319135|5319135|5319135 X - 5318994 5319037 3'utr Rnp4F FlyBase G64855.1 CAACCTAAACAGACAAGGTTGGAGAACACTGTACAAAGAGAAAA 20 5319008 0.889598479 3 19 55 0.952380952 1 0.285714286 0.05 0.095238095 20 0 1 20 X:5318994-5319037 7 Rnp4F FBtr0070752|FBtr0340477|FBtr0112876|FBtr0070753 5318926|5318926|5318926|5318926 5319135|5319135|5319135|5319135 GTACAAA 7mer-A1 dme-miR-305-5p X - 5318986 5319111 3'utr Rnp4F FlyBase G48868.1 CGGTGCCAGCGGCCATGGTTTAGTTTGTAAGACGAAGACGAAGATTTGGAGCATATATTTTTTTAGATTTAAGGCAACCTAAACAGACAAGGTTGGAGAACACTGTACAAAGAGAAAAACTGTTGT 20 5319008 0.949601018 7 17 86 0.833333333 1.096910013 0.033333333 0.4 0.6 20 4 1 25 X:5318986-5319111 7 15 4413 FBgn0014024 860.4066667 33.54333333 51.90333333 0.017433617 0.447182749 0.28899878 1 1 1 0.15 dme-miR-308-3p 7mer-m1 TGTGATT X 5327209 5327215 - X_5327209_5327215_- 0.439672331 0.474229032 0.456950682 0.024435277 CG3309 FBtr0344827|FBtr0070798 5326673|5326673 5327305|5327305 X - 5327190 5327239 3'utr CG3309 FlyBase G64868.1 CTGTCTGCTAGTATCCTGTGATTGTGTGATTGTGCCTGGCGGTGCTCTTT 51 5327209 0.639092411 13 51 475 1 1.785329835 0.229508197 0.196078431 0.327868852 51 0 0 61 X:5327190-5327239 7 CG3309 FBtr0344827|FBtr0070798 5326673|5326673 5327305|5327305 TGTGATT 7mer-m1 dme-miR-308-3p X - 5327160 5327239 3'utr CG3309 FlyBase G48878.1 CTGTCTGCTAGTATCCTGTGATTGTGTGATTGTGCCTGGCGGTGCTCTTTATCAGTGTAAATAGATTTTAATCGGCGATT 47 5327209 0.990501456 13 43 443 0.914285714 1.10720997 0.285714286 0.382978723 0.585714286 47 2 4 64 X:5327160-5327239 7 47 4414 FBgn0029756 52.66666667 2.41 3.66 0.892405063 19.50207469 12.84153005 -6 -6 -6 0.15 dme-miR-184-5p 6mer3-8 TGATAA X 5412697 5412702 - X_5412697_5412702_- 0.85792884 0.609358054 0.733643447 0.175766028 spoon FBtr0070795 5412384 5414972 X - 5412528 5412738 3'utr spoon FlyBase G64872.1 TCGAATTCATTGTAGATTTGTCACTTGTACAATTGTTGATAAACTGATTAACTGATAACTGATTAACTGACATAGAGATAATGCAAACACGACAGACATGATGTAGAGCACATATTGAAACTAATCTTAGTCGATAGCGAGAAGAGAAGAAGAGACGTGAAGTGAAGAGTCCTCCCTCAAAGATCATCGTAAGTGTGTGGTACTTCTATTT 70 5412705 0.942223787 24 62 473 0.894117647 1.579783597 0.2 0.171428571 0.317647059 70 8 1 76 X:5412528-5412738 6 spoon FBtr0070795 5412384 5414972 TGATAA 6mer3-8 dme-miR-184-5p X - 5412605 5412730 3'utr spoon FlyBase G48882.1 ATTGTAGATTTGTCACTTGTACAATTGTTGATAAACTGATTAACTGATAACTGATTAACTGACATAGAGATAATGCAAACACGACAGACATGATGTAGAGCACATATTGAAACTAATCTTAGTCGA 36 5412705 0.984619078 20 35 280 0.927272727 1.707570176 0.181818182 0.388888889 0.6 36 4 0 51 X:5412605-5412730 6 19.5 4415 FBgn0263987 8368.983333 240.6166667 372.13 0.002330032 0.081041768 0.052401043 3 3 3 0.15 dme-miR-92b-3p 6mer3-8 GTGCAA X 5412925 5412930 - X_5412925_5412930_- 0.998437147 0.996944694 0.997690921 0.001055286 spoon FBtr0070795 5412384 5414972 X - 5412823 5412979 3'utr spoon FlyBase G64873.1 TATCCTAAACTAAAACAACTTTTGGAGGGGCTGCCCTCCACACACTGTAGTGCAAATTCGTTTAATGGTTCCTCGTTTTAATAATGTCGTTTAATGCCTTTGGAAATTCGAACTACATTTTAGTCTATGGAACACTAAATACATATTATTGGTTACT 60 5412932 0.983998334 23 59 464 1 1.857332496 0.208333333 0.166666667 0.305555556 60 0 0 72 X:5412823-5412979 6 spoon FBtr0070795 5412384 5414972 GTGCAA 6mer3-8 dme-miR-92b-3p X - 5412901 5412965 3'utr spoon FlyBase G48884.1 ACAACTTTTGGAGGGGCTGCCCTCCACACACTGTAGTGCAAATTCGTTTAATGGTTCCTCGTTTT 14 5412933 0.843143946 5 13 97 0.916666667 1.342422681 0.125 0.428571429 0.666666667 14 2 0 22 X:5412901-5412965 6 20.5 4416 FBgn0263987 8368.983333 240.6166667 372.13 0.002449521 0.085197756 0.055088276 2 3 2.5 0.15 dme-miR-304-5p 6mer3-8 TGAGAT X 5414157 5414162 - X_5414157_5414162_- 0.723578159 0.542458524 0.633018342 0.128070968 spoon FBtr0070794|FBtr0070795|FBtr0308689|FBtr0308688 5413825|5412384|5413825|5413825 5414972|5414972|5414972|5414972 X - 5414090 5414231 3'utr spoon FlyBase G64879.1 GAAACATAGAAACTCTGGATAAGAATGGAGAAAAACCTGACAAAACTTTAGTTTTATGCTGCTATTTGCTGAGATCTGTAAATATTATATTAGGCCTTTTTAAACAACTGATAATATCTAATCGACGAGTTCATACATTTAC 127 5414165 0.932894368 14 122 1236 0.96 1.681241237 0.3 0.157480315 0.286666667 127 4 2 144 X:5414090-5414231 6 spoon FBtr0308688|FBtr0308689|FBtr0070795|FBtr0070794 5413825|5413825|5412384|5413825 5414972|5414972|5414972|5414972 TGAGAT 6mer3-8 dme-miR-304-5p X - 5414086 5414198 3'utr spoon FlyBase G48887.1 AACCTGACAAAACTTTAGTTTTATGCTGCTATTTGCTGAGATCTGTAAATATTATATTAGGCCTTTTTAAACAACTGATAATATCTAATCGACGAGTTCATACATTTACATGC 105 5414165 0.99071426 13 98 1007 0.935294118 1.298307137 0.376470588 0.438095238 0.652941176 105 4 7 159 X:5414086-5414198 6 103 4417 FBgn0263987 8368.983333 240.6166667 372.13 0.012307349 0.428066773 0.276784994 3 3 3 0.15 dme-miR-999-3p 6mer3-8 AGTTAA X 5426559 5426564 + X_5426559_5426564_+ 0.999957043 0.999858715 0.999907879 6.95E-05 CG4165 FBtr0070775|FBtr0340461|FBtr0070773|FBtr0340462|FBtr0070772 5426346|5426346|5426346|5426346|5426346 5426906|5426906|5426906|5427219|5426906 X + 5426542 5426615 3'utr CG4165 FlyBase G58932.1 TGGAACAAGCTTTAGTTAGTTAAATGATGCAAAGGAGTAGACACACGCACTCATGTTAAATTGTAGTTCTCAGG 15 5426566 0.986378326 10 11 92 0.722222222 0.812913357 0.333333333 0.133333333 0.277777778 15 4 1 13 X:5426542-5426615 6 CG4165 FBtr0340462|FBtr0070772|FBtr0340461|FBtr0070773|FBtr0070775 5426346|5426346|5426346|5426346|5426346 5427219|5426906|5426906|5426906|5426906 AGTTAA 6mer3-8 dme-miR-999-3p X + 5426536 5426584 3'utr CG4165 FlyBase G44572.1 TTTTTTTGGAACAAGCTTTAGTTAGTTAAATGATGCAAAGGAGTAGACA 6 5426561 0.977929237 6 6 42 1 1 0.1 0.5 0.7 6 0 0 10 X:5426536-5426584 6 7.5 4418 FBgn0029763 634.33 17.08666667 26.07333333 0.011823499 0.438938744 0.287650217 -7 -2 -4.5 0.15 dme-miR-277-3p 7mer-A1 GCATTTA X 5518321 5518327 + X_5518321_5518327_+ 0.776916257 0.788614783 0.78276552 0.008272089 CG12730 FBtr0345785|FBtr0070780 5518138|5518138 5518771|5518771 X + 5518234 5518435 3'utr CG12730 FlyBase G58945.1 GCGAACGAGTATCTGTGTGAGTGCCAGTGCGTGCGCGTGTGTGTGAGTTTGTTTTGAGAGAGCGAGTATCGCTTGCGTTTGCTTGAAGCATTTAAGTCTGAAGTTTGAAATTGTGGCAAGCTTTTGTCGCGGGAACAGTTACCGTATGTGTTATCTAATAGTCGCTAGATATAGGTCAAGAAGTGAAGAAGATAAAGCCAGT 170 5518325 0.987591101 33 157 1397 0.928229665 1.685741739 0.248803828 0.176470588 0.330143541 170 12 3 194 X:5518234-5518435 7 CG12730 FBtr0070780|FBtr0345785 5518138|5518138 5518771|5518771 GCATTTA 7mer-A1 dme-miR-277-3p X + 5518263 5518411 3'utr CG12730 FlyBase G44588.1 CGTGCGCGTGTGTGTGAGTTTGTTTTGAGAGAGCGAGTATCGCTTGCGTTTGCTTGAAGCATTTAAGTCTGAAGTTTGAAATTGTGGCAAGCTTTTGTCGCGGGAACAGTTACCGTATGTGTTATCTAATAGTCGCTAGATATAGGTCA 133 5518325 0.74017343 23 119 1063 0.893401015 1.546542663 0.253807107 0.409090909 0.604060914 132 17 4 176 X:5518263-5518411 7 114 4419 FBgn0029771 260.35 25.59333333 39.07333333 0.437872095 4.45428497 2.917590855 -4 -4 -4 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 5518507 5518513 + X_5518507_5518513_+ 0.808569916 0.807572273 0.808071094 0.00070541 CG12730 FBtr0345785|FBtr0070780 5518138|5518138 5518771|5518771 X + 5518452 5518528 3'utr CG12730 FlyBase G58946.1 GTAGATATAATAGCGAACAGAAAGCGAGAGAAAACCACTAACAAGAGAGCAAATTCCAAAGAGATAAGTTGTATTGT 165 5518505 0.899243026 5 162 360 0.976415094 1.713910354 0.028301887 0.2 0.377358491 165 2 3 207 X:5518452-5518528 7 CG12730 FBtr0070780|FBtr0345785 5518138|5518138 5518771|5518771 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X + 5518485 5518523 3'utr CG12730 FlyBase G44589.1 ACCACTAACAAGAGAGCAAATTCCAAAGAGATAAGTTGT 115 5518505 0.807079408 2 114 230 0.994505495 1.956648579 0.038461538 0.330434783 0.576923077 115 0 1 181 X:5518485-5518523 7 138.5 4420 FBgn0029771 260.35 25.59333333 39.07333333 0.531976186 5.411565512 3.54461696 2 2 2 0.15 dme-miR-932-5p 6mer2-7 GAATTG X 5518706 5518711 + X_5518706_5518711_+ 0.999428882 0.881058048 0.940243465 0.083700866 CG12730 FBtr0345785|FBtr0070780 5518138|5518138 5518771|5518771 X + 5518667 5518756 3'utr CG12730 FlyBase G58947.1 AAGTAGTTAGTTTTTAGCACAATGCTTTTCATGACCACTGAATTGTTGTATTTATAAACAAATAAATCGTTTGCAATGGAAGAATAAAAC 27 5518710 0.987915578 13 26 228 0.967741935 1.477121255 0 0.148148148 0.258064516 27 1 0 30 X:5518667-5518756 6 CG12730 FBtr0070780|FBtr0345785 5518138|5518138 5518771|5518771 GAATTG 6mer2-7 dme-miR-932-5p X + 5518624 5518731 3'utr CG12730 FlyBase G44591.1 ATTAAGTACATAGTATTTGTGTGTCTCAAGTGAATATACATTGAAGTAGTTAGTTTTTAGCACAATGCTTTTCATGACCACTGAATTGTTGTATTTATAAACAAATAA 16 5518710 0.989759221 11 15 142 1 1.380211242 0.041666667 0.375 0.583333333 16 0 0 24 X:5518624-5518731 6 15 4421 FBgn0029771 260.35 25.59333333 39.07333333 0.057614749 0.586090128 0.383893534 -4 -4 -4 0.15 dme-bantam-3p 7mer-m8 TGATCTC X 5685736 5685742 - X_5685736_5685742_- 0.661227985 0.661615241 0.661421613 0.000273792 CG3160 FBtr0070847 5685251 5685911 X - 5685665 5685776 3'utr CG3160 FlyBase G64925.1 CAGCGGGAAGTCCAAACTGAGCTCGGCTGGGCGTTGATCTCGATTTGCCCCGATCGCACGTTATATGTATTAATTGTTTTTACGCCTGCTGTCTGCTGCATTCGATTGGCGA 85 5685743 0.981849597 12 84 624 0.989473684 1.973127854 0.347368421 0.082352941 0.178947368 85 1 0 94 X:5685665-5685776 7 CG3160 FBtr0070847 5685251 5685911 TGATCTC 7mer-m8 dme-bantam-3p X - 5685700 5685761 3'utr CG3160 FlyBase G48928.1 ACTGAGCTCGGCTGGGCGTTGATCTCGATTTGCCCCGATCGCACGTTATATGTATTAATTGT 46 5685743 0.97796181 9 43 337 0.925 1.86923172 0.425 0.456521739 0.6875 46 6 0 74 X:5685700-5685761 7 60.5 4422 FBgn0029789 138.8966667 4.523333333 6.876666667 0.435575608 13.37509211 8.797867184 1 1 1 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA X 5708608 5708615 + X_5708608_5708615_+ 0.497344976 0.497153813 0.497249395 0.000135199 CG4096 FBtr0301084|FBtr0301083 5707646|5708513 5708633|5708633 X + 5708581 5708629 3'utr CG4096 FlyBase G58976.1 TTCAGCGAGTAAGCGATCATCCCAGATGTACTTAACTAACTATACGCAC 33 5708607 0.860656772 2 33 225 1 1.612783857 0 0.212121212 0.365853659 33 0 0 41 X:5708581-5708629 8 CG4096 FBtr0301084|FBtr0301083 5707646|5708513 5708633|5708633 GTACTTAA 8mer-A1 dme-miR-252-5p X + 5708582 5708629 3'utr CG4096 FlyBase G44613.1 TCAGCGAGTAAGCGATCATCCCAGATGTACTTAACTAACTATACGCAC 25 5708607 0.868937788 2 25 177 1 1.602059991 0.1 0.48 0.675 25 0 0 40 X:5708582-5708629 8 29 4423 FBgn0029791 34.02 1.16 1.753333333 0.852439741 25 16.53992395 1 1 1 0.15 dme-miR-305-3p 6mer3-8 ATGTGC X 5719935 5719940 - X_5719935_5719940_- 0.591674444 0.999896781 0.795785613 0.288656827 CG32758 FBtr0340670|FBtr0339525 5719372|5719734 5721627|5721627 X - 5719924 5719988 3'utr CG32758 FlyBase G64933.1 TTGATTCCATATCTCTTTCGTATCTGTATTGGATTTGTTAATCTCTCGATGTGCGTAGACCACGT 15 5719951 0.737672875 6 12 149 0.8125 1.113943352 0.25 0.066666667 0.125 15 3 0 13 X:5719924-5719988 6 CG32758 FBtr0339525|FBtr0340670 5719734|5719372 5721627|5721627 ATGTGC 6mer3-8 dme-miR-305-3p X - 5719912 5719960 3'utr CG32758 FlyBase G48934.1 TTGGATTTGTTAATCTCTCGATGTGCGTAGACCACGTAATGTATTTATT 14 5719951 0.771289147 8 13 116 0.947368421 1.255272505 0.421052632 0.285714286 0.473684211 14 1 0 18 X:5719912-5719960 6 12 4424 FBgn0052758 1999.443333 76.95666667 118.6333333 0.00600167 0.15593191 0.101152009 11 11 11 0.15 dme-miR-283-5p 8mer-m1 TGATATTT X 5720040 5720047 - X_5720040_5720047_- 0.529532562 0.493842429 0.511687495 0.025236782 CG32758 FBtr0340670|FBtr0339525 5719372|5719734 5721627|5721627 X - 5720011 5720102 3'utr CG32758 FlyBase G64934.1 TTATAGAATGGCATATAGGCATACATTTATCAACGATGCAAGTGACGTCTGCTTGTGATATTTACAATTTACACGATTATTATGATTAATTT 171 5720050 0.848181391 16 160 1547 0.944186047 1.462397998 0.269767442 0.187134503 0.353488372 171 6 6 203 X:5720011-5720102 8 CG32758 FBtr0339525|FBtr0340670 5719734|5719372 5721627|5721627 TGATATTT 8mer-m1 dme-miR-283-5p X - 5720028 5720096 3'utr CG32758 FlyBase G48935.1 AATGGCATATAGGCATACATTTATCAACGATGCAAGTGACGTCTGCTTGTGATATTTACAATTTACACG 129 5720051 0.988979668 11 118 1168 0.878947368 1.377618431 0.273684211 0.317829457 0.536842105 129 17 6 167 X:5720028-5720096 8 141.5 4425 FBgn0052758 1999.443333 76.95666667 118.6333333 0.070769698 1.838697102 1.192750773 3 4 3.5 0.15 dme-miR-1007-3p 8mer-A1 TGAGCTTA X 5739327 5739334 - X_5739327_5739334_- 0.625343443 0.62524984 0.625296642 6.62E-05 IntS6 FBtr0332400|FBtr0332399|FBtr0070842|FBtr0070841|FBtr0332401 5738661|5738661|5738661|5738661|5738661 5739981|5739981|5739981|5739981|5739981 X - 5739317 5739443 3'utr IntS6 FlyBase G64942.1 AAATTTACTCTTGAGCTTAGGAATAATTTTAAATAGACTTAGATAAATTAAGATAAATCTAAGTGTAGTGTATGTGTATAAAAAAAAAGGGAAAAGTTTAGGAAAAGCTTGAGCTTAATGAGCCCCA 17 5739334 0.979884822 11 17 119 1 1.301029996 0.25 0.176470588 0.3 17 0 0 20 X:5739317-5739443 8 IntS6 FBtr0332401|FBtr0070841|FBtr0070842|FBtr0332399|FBtr0332400 5738661|5738661|5738661|5738661|5738661 5739981|5739981|5739981|5739981|5739981 TGAGCTTA 8mer-A1 dme-miR-1007-3p X - 5739316 5739361 3'utr IntS6 FlyBase G48939.1 AAAAAAGGGAAAAGTTTAGGAAAAGCTTGAGCTTAATGAGCCCCAC 6 5739334 0.966603628 3 6 33 1 0.903089987 0 0.333333333 0.5 6 0 0 8 X:5739316-5739361 8 6.5 4426 FBgn0261383 1360.436667 27.15666667 41.81333333 0.004777878 0.239351909 0.155452806 0 0 0 0.15 dme-miR-11-3p 8mer-m1 CTGTGATG X 5739923 5739930 - X_5739923_5739930_- 0.462251918 0.461683261 0.461967589 0.000402061 IntS6 FBtr0332400|FBtr0332399|FBtr0070842|FBtr0070841|FBtr0332401 5738661|5738661|5738661|5738661|5738661 5739981|5739981|5739981|5739981|5739981 X - 5739911 5739958 3'utr IntS6 FlyBase G64946.1 AGCCCGCGGGGTCATCCAATCCATCTGTCTGTGATGTCAACAAAATCG 42 5739931 0.793148294 4 40 308 0.960784314 1.69019608 0.058823529 0.19047619 0.333333333 42 2 0 49 X:5739911-5739958 8 IntS6 FBtr0332401|FBtr0070841|FBtr0070842|FBtr0332399|FBtr0332400 5738661|5738661|5738661|5738661|5738661 5739981|5739981|5739981|5739981|5739981 CTGTGATG 8mer-m1 dme-miR-11-3p X - 5739911 5739963 3'utr IntS6 FlyBase G48942.2 CACTGAGCCCGCGGGGTCATCCAATCCATCTGTCTGTGATGTCAACAAAATCG 24 5739932 0.975410477 5 20 149 0.894736842 1.531478917 0.052631579 0.416666667 0.631578947 24 4 0 34 X:5739911-5739963 8 31 4427 FBgn0261383 1360.436667 27.15666667 41.81333333 0.022786801 1.141524488 0.741390306 1 2 1.5 0.15 dme-miR-2a-2-5p 7mer-m1 GATGAGG X 5760654 5760660 - X_5760654_5760660_- 0.574968395 0.824809017 0.699888706 0.176663982 MAPk-Ak2 FBtr0302940|FBtr0070839|FBtr0308577|FBtr0070837 5759906|5759906|5759906|5759906 5760715|5760715|5760715|5760715 X - 5760621 5760690 3'utr MAPk-Ak2 FlyBase G64972.2 CACGGCCAACCCGGGAGTGAGATGAGATGAGATGAGGAGAGATGGGCGTAGGATGTAGGATGGGCGAACC 18 5760667 0.940777874 4 18 60 1 1.278753601 0.315789474 0.055555556 0.105263158 18 0 0 19 X:5760621-5760690 7 MAPk-Ak2 FBtr0070837|FBtr0308577|FBtr0070839|FBtr0302940 5759906|5759906|5759906|5759906 5760715|5760715|5760715|5760715 GATGAGG 7mer-m1 dme-miR-2a-2-5p X - 5760573 5760678 3'utr MAPk-Ak2 FlyBase G48963.1 GGGAGTGAGATGAGATGAGATGAGGAGAGATGGGCGTAGGATGTAGGATGGGCGAACCATCGGTTTAACACTTAAGCGGATAACAATGTTGTACAATGCTTTACAA 15 5760648 0.971202314 9 14 78 0.904761905 1.278753601 0.523809524 0.333333333 0.523809524 15 2 0 19 X:5760573-5760678 7 10.5 4428 FBgn0013987 1196.673333 75.86 116.6 0.008774324 0.138412866 0.090051458 7 -12 -2.5 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC X 5873919 5873925 - X_5873919_5873925_- 0.661455001 0.661537082 0.661496041 5.81E-05 mof FBtr0070829 5873838 5874268 X - 5873868 5874046 3'utr mof FlyBase G64986.1 TTAAGGAGTTTTACGGATAGGCTGTTGTAACTCTTAATGATAGAACCAAATGTCTAATTCGTTTGGCTAATGTTTTTGGAGAGGGAATTTGGAACAACCATTTAAAAATTTTAAAAACTTCTGTGTTCTTGAAATATATATCTTTAACTACTTTATCTCGAAAAACTCTGGACTTGTTA 90 5873918 0.988649972 22 85 805 0.954545455 1.544068044 0.081818182 0.2 0.345454545 90 3 2 105 X:5873868-5874046 7 mof FBtr0070829 5873838 5874268 TGTGTTC 7mer-m8 dme-miR-317-3p X - 5873899 5873973 3'utr mof FlyBase G48975.1 TTTTGGAGAGGGAATTTGGAACAACCATTTAAAAATTTTAAAAACTTCTGTGTTCTTGAAATATATATCTTTAAC 50 5873927 0.799905759 12 46 445 0.892307692 1.763427994 0.015384615 0.26 0.430769231 50 7 0 58 X:5873899-5873973 7 51 4429 FBgn0014340 384.9966667 15.43 23.56333333 0.132468679 3.305249514 2.164379686 -7 2 -2.5 0.15 dme-miR-1008-3p 6mer3-8 AGCTGT X 5877095 5877100 - X_5877095_5877100_- 1 0.991465517 0.995732759 0.006034803 CG3016 FBtr0343537|FBtr0070828 5876998|5876998 5877429|5877429 X - 5877080 5877119 3'utr CG3016 FlyBase G64998.1 AAATTCATGCCGTGCTTTTAGCTGTCTGTATTTAGCAATG 11 5877102 0.647605168 7 11 111 1 1.230448921 0.470588235 0.272727273 0.529411765 11 0 0 17 X:5877080-5877119 6 CG3016 FBtr0343537|FBtr0070828 5876998|5876998 5877429|5877429 AGCTGT 6mer3-8 dme-miR-1008-3p X - 5877092 5877132 3'utr CG3016 FlyBase G48981.1 TTTTAAGAATTCCAAATTCATGCCGTGCTTTTAGCTGTCTG 7 5877102 0.98989689 3 5 52 0.875 0.84509804 0 0.142857143 0.25 7 1 0 7 X:5877092-5877132 6 7.5 4430 FBgn0029819 234.6666667 12.53666667 19.16 0.031960227 0.598245148 0.391440501 2 2 2 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 5877399 5877405 - X_5877399_5877405_- 0.659238382 0.660160979 0.65969968 0.000652377 CG3016 FBtr0343537|FBtr0070828 5876998|5876998 5877429|5877429 X - 5877327 5877461 stop_codon CG3016 FlyBase G65001.1 GTGGCCAGCAGAGGCAGCTAAATCTGCGCTAGTCAGGTGTAGGTCGTCGGTATTATTCTAGTCCATACTTTTGATGTGATGAATATGAATATCCGAAACCAAATCCTTTTCGTCGAACGGTGGCCATAGCAAACA 103 5877406 0.802965481 14 101 895 0.976377953 1.792391689 0.196850394 0.174757282 0.330708661 103 2 1 124 X:5877327-5877461 7 CG3016 FBtr0343537|FBtr0070828 5876998|5876998 5877429|5877429 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X - 5877378 5877461 stop_codon CG3016 FlyBase G48985.1 GTGGCCAGCAGAGGCAGCTAAATCTGCGCTAGTCAGGTGTAGGTCGTCGGTATTATTCTAGTCCATACTTTTGATGTGATGAAT 41 5877406 0.988379341 9 41 372 1 1.799340549 0.253968254 0.463414634 0.650793651 41 0 0 63 X:5877378-5877461 7 57 4431 FBgn0029819 234.6666667 12.53666667 19.16 0.242897727 4.546663122 2.974947808 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA X 5883108 5883115 + X_5883108_5883115_+ 0.64429868 0.644153743 0.644226212 0.00010253 CG16721 FBtr0339948|FBtr0339948|FBtr0339948|FBtr0345313|FBtr0345313|FBtr0345313|FBtr0070821|FBtr0070821|FBtr0070821 5882788|5882788|5882788|5882788|5882788|5882788|5882788|5882788|5882788 5883391|5883391|5883391|5883391|5883391|5883391|5883391|5883391|5883391 X + 5883041 5883212 3'utr CG16721 FlyBase G58998.1 AATCCCCCTGCAAAAAAGCCAGTGGGATCCGAGGCATCTGAAAGGAATCAAAAATGTGCTGGAGCGTCTGTGATAACAAGAATATTCAACACAAAATTCAAATTTTTGGGGGTTAAGAAAAGTGAACTCGTGAATTATGTGTGCTCCTCAATTTTCGTAATGTAAACCCCCT 116 5883107 0.982662307 22 107 773 0.918518519 1.491361694 0.066666667 0.146551724 0.266666667 116 8 3 124 X:5883041-5883212 8 CG16721 FBtr0070821|FBtr0070821|FBtr0070821|FBtr0345313|FBtr0345313|FBtr0345313|FBtr0339948|FBtr0339948|FBtr0339948 5882788|5882788|5882788|5882788|5882788|5882788|5882788|5882788|5882788 5883391|5883391|5883391|5883391|5883391|5883391|5883391|5883391|5883391 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X + 5883083 5883120 3'utr CG16721 FlyBase G44629.1 AGGAATCAAAAATGTGCTGGAGCGTCTGTGATAACAAG 43 5883107 0.719263795 5 39 229 0.919354839 1.755874856 0.080645161 0.325581395 0.532258065 43 5 0 57 X:5883083-5883120 8 61 4432 FBgn0029820 507.81 24.94 37.79666667 0.120123668 2.445870088 1.613898933 1 1 1 0.15 dme-miR-970-3p 6mer2-7 CTTATG X 5904390 5904395 + X_5904390_5904395_+ 0.927170093 0.710644482 0.818907288 0.15310672 Act5C FBtr0100663|FBtr0070823|FBtr0100662|FBtr0345894 5903827|5903827|5903827|5903827 5904464|5905227|5904788|5905399 X + 5904245 5904463 3'utr Act5C FlyBase G59005.1 AGCTTACACACACACATTCGCGGCATGACAAGGACATCAAGATAAAGAAGAACTTAAAGAAGATATTTCCCAAAGCGCAAAAAGAACACACACACATTGCAAAACACAAACAACACACTAGCGTTTTGTACAATTCGTCAGCAACCTTATGTATTATTTTTTAATTATGATGTAATTATAAACAAAGTGAAACAAAAATATGAAAACAAAAAGGAAAAT 238 5904392 0.956565088 39 219 1672 0.928057554 1.411619706 0.053956835 0.138655462 0.262589928 238 11 9 258 X:5904245-5904463 6 Act5C FBtr0345894|FBtr0100662|FBtr0070823|FBtr0100663 5903827|5903827|5903827|5903827 5905399|5904788|5905227|5904464 CTTATG 6mer2-7 dme-miR-970-3p X + 5904248 5904459 3'utr Act5C FlyBase G44637.1 TTACACACACACATTCGCGGCATGACAAGGACATCAAGATAAAGAAGAACTTAAAGAAGATATTTCCCAAAGCGCAAAAAGAACACACACACATTGCAAAACACAAACAACACACTAGCGTTTTGTACAATTCGTCAGCAACCTTATGTATTATTTTTTAATTATGATGTAATTATAAACAAAGTGAAACAAAAATATGAAAACAAAAAGGA 135 5904392 0.980176313 33 123 961 0.921052632 1.544068044 0.036842105 0.311111111 0.510526316 135 11 4 175 X:5904248-5904459 6 87.5 4433 FBgn0000042 40624.21333 2527.44 3863.87 0.002153888 0.034620011 0.022645689 -2 -2 -2 0.15 dme-miR-999-3p 6mer3-8 AGTTAA X 5910741 5910746 + X_5910741_5910746_+ 0.999999968 0.99999992 0.999999944 7.07E-08 CG12236 FBtr0070826 5910640 5911789 X + 5910620 5910825 stop_codon CG12236 FlyBase G59018.1 GGCCATCAAGACGGAGAACTGATGCGTCTTCATAAGTCTCGGTCGCCTGCGAGCCGCATCTGGATCTGCAACTGCATCTGGATTGAGATCGATAGGATATACGGATAGGGGAGAGAGATATAGTTAATTACGTCCAGCTTAGCGAGCAGCCAGCAAAACCAATCAACCCAACCAGCCCATTCCCTCGTGTTTCGATCAAAGGCCCC 82 5910740 0.977207903 21 75 494 0.913043478 1.924279286 0.141304348 0.085365854 0.184782609 82 8 0 84 X:5910620-5910825 6 CG12236 FBtr0070826 5910640 5911789 AGTTAA 6mer3-8 dme-miR-999-3p X + 5910684 5910825 3'utr CG12236 FlyBase G44649.1 TCTGCAACTGCATCTGGATTGAGATCGATAGGATATACGGATAGGGGAGAGAGATATAGTTAATTACGTCCAGCTTAGCGAGCAGCCAGCAAAACCAATCAACCCAACCAGCCCATTCCCTCGTGTTTCGATCAAAGGCCCC 43 5910747 0.973826228 11 43 267 1 1.838849091 0.028985507 0.465116279 0.666666667 43 0 0 69 X:5910684-5910825 6 43.5 4434 FBgn0029822 534.9233333 22.61666667 34.62 0.081320065 1.923360354 1.256499133 1 -6 -2.5 0.15 dme-miR-33-5p 7mer-A1 AATGCAA X 5910857 5910863 + X_5910857_5910863_+ 0.782898903 0.782911324 0.782905114 8.77E-06 CG12236 FBtr0070826 5910640 5911789 X + 5910826 5910876 3'utr CG12236 FlyBase G59019.1 AAAACGAAAACTAGCCAAATTTGTCAACTTAAATGCAAAGCAGATAGGAGT 14 5910855 0.952703307 5 12 81 0.857142857 1.079181246 0.214285714 0 0 14 2 0 12 X:5910826-5910876 7 CG12236 FBtr0070826 5910640 5911789 AATGCAA 7mer-A1 dme-miR-33-5p X + 5910827 5910875 3'utr CG12236 FlyBase G44650.1 AAACGAAAACTAGCCAAATTTGTCAACTTAAATGCAAAGCAGATAGGAG 7 5910855 0.891859222 3 6 35 0.769230769 1 0.076923077 0.428571429 0.692307692 7 3 0 10 X:5910827-5910875 7 8 4435 FBgn0029822 534.9233333 22.61666667 34.62 0.014955414 0.353721444 0.2310803 2 2 2 0.15 dme-miR-283-5p 8mer-A1 TGATATTA X 5911354 5911361 + X_5911354_5911361_+ 0.591784624 0.592104415 0.59194452 0.000226133 CG12236 FBtr0070826 5910640 5911789 X + 5911290 5911360 3'utr CG12236 FlyBase G59023.1 CTTAGCCCATATCGATCACTTTATTTTAGCTCTTAAACAACCTCATATGTATTTTTTGAAACTCTGATATT 16 5911333 0.991304349 9 15 163 0.941176471 0.903089987 0.058823529 0.0625 0.117647059 16 0 1 16 X:5911290-5911360 7 CG12236 FBtr0070826 5910640 5911789 TGATATTA 8mer-A1 dme-miR-283-5p X + 5911307 5911434 3'utr CG12236 FlyBase G44654.1 ACTTTATTTTAGCTCTTAAACAACCTCATATGTATTTTTTGAAACTCTGATATTATTCAGTTTTTGTATATAGAGCTAGGCAACTTAACCTAAATTAAGGTAAACCCAAAAACAAAGTCCCCCCTCCA 17 5911334 0.986087962 11 16 140 1 1.322219295 0.285714286 0.235294118 0.380952381 17 0 0 21 X:5911307-5911434 8 1.5 4436 FBgn0029822 534.9233333 22.61666667 34.62 0.00280414 0.066322771 0.043327556 21 20 20.5 0.15 dme-miR-1012-3p 6mer3-8 TTGACT X 5911615 5911620 + X_5911615_5911620_+ 0.999869966 0.994869828 0.997369897 0.003535675 CG12236 FBtr0070826 5910640 5911789 X + 5911463 5911701 3'utr CG12236 FlyBase G59025.1 AGGAAGGAAGCTGTGTACTTTGCTCACAAGCAGAGATCAGGAGAATATGAGAAAATATATATATTACCCCTTGTGTACAAATTTAAATACGATTTAATCCAATTACCCGGCGCGCTTTTGACCATCTGTGTTCAGCATTAGAGCGTTGGCAGTTGACTGTAAATTAGCTAAATTAGTTTTAGTTTAGTTTAAGACACCACAAATTCGATTGGACATAGTTTAGTTATTCGGTGTAACTT 65 5911616 0.981049885 27 65 467 1 1.826074803 0.104477612 0.030769231 0.059701493 65 0 0 67 X:5911463-5911701 6 CG12236 FBtr0070826 5910640 5911789 TTGACT 6mer3-8 dme-miR-1012-3p X + 5911553 5911636 3'utr CG12236 FlyBase G44657.1 GATTTAATCCAATTACCCGGCGCGCTTTTGACCATCTGTGTTCAGCATTAGAGCGTTGGCAGTTGACTGTAAATTAGCTAAATT 33 5911616 0.943335195 13 31 215 0.916666667 1.041392685 0.0625 0.333333333 0.541666667 33 1 3 44 X:5911553-5911636 6 24 4437 FBgn0029822 534.9233333 22.61666667 34.62 0.044866243 1.061164333 0.693240901 -1 -1 -1 0.15 dme-miR-932-5p 6mer3-8 GGAATT X 5913105 5913110 - X_5913105_5913110_- 0.991550585 0.999863284 0.995706934 0.005877967 CG3011 FBtr0290235|FBtr0070827|FBtr0345317 5913065|5913065|5913065 5913196|5913196|5913196 X - 5913074 5913130 3'utr CG3011 FlyBase G65006.1 GCTTGTTAATATCATAAGTGGGAATTAGTAGTTAAGCCATTAAACGCATTTCAGTTT 17 5913116 0.989521122 6 15 147 0.9 0.954242509 0.3 0.117647059 0.25 17 1 1 18 X:5913074-5913130 6 CG3011 FBtr0070827|FBtr0345317|FBtr0290235 5913065|5913065|5913065 5913196|5913196|5913196 GGAATT 6mer3-8 dme-miR-932-5p X - 5913075 5913148 3'utr CG3011 FlyBase G48988.1 TACATCCTCGAAAAGTCCGCTTGTTAATATCATAAGTGGGAATTAGTAGTTAAGCCATTAAACGCATTTCAGTT 15 5913116 0.980095211 10 15 110 1 1.342422681 0 0.466666667 0.636363636 15 0 0 22 X:5913075-5913148 6 13 4438 FBgn0029823 724.9866667 47.58333333 72.74 0.017931364 0.273204904 0.178718724 6 6 6 0.15 dme-bantam-3p 6mer3-8 TGATCT X 5941596 5941601 + X_5941596_5941601_+ 0.999887412 0.999923338 0.999905375 2.54E-05 CG3726 FBtr0343051|FBtr0070858 5941403|5941362 5941852|5941664 X + 5941492 5941622 3'utr CG3726 FlyBase G59037.1 AAAGACAGCTAGACGAGGCTAGTTTTGGATCCTGAGTAATGCTTTCCTGAATCCTGAATTCCCACATTAATGTGTTGTTCCCATCGGTGGGTCACAACTATAACTGATCTACACATTTAGGATCTTATTAT 29 5941596 0.745693469 15 28 195 0.96875 1.491361694 0.0625 0.103448276 0.1875 29 1 0 31 X:5941492-5941622 6 CG3726 FBtr0343051|FBtr0070858 5941403|5941362 5941852|5941664 TGATCT 6mer3-8 dme-bantam-3p X + 5941529 5941623 3'utr CG3726 FlyBase G44662.1 AATGCTTTCCTGAATCCTGAATTCCCACATTAATGTGTTGTTCCCATCGGTGGGTCACAACTATAACTGATCTACACATTTAGGATCTTATTATT 16 5941598 0.985706042 8 14 126 0.888888889 1.204119983 0.111111111 0.125 0.222222222 16 2 0 16 X:5941529-5941623 6 8.5 4439 FBgn0029824 462.5733333 18.42 28.35333333 0.018375465 0.46145494 0.299788385 0 -2 -1 0.15 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA X 5944411 5944418 + X_5944411_5944418_+ 0.625356818 0.624429558 0.624893188 0.000655629 CG12728 FBtr0343052 5944386 5945250 X + 5944260 5944448 stop_codon CG12728 FlyBase G59047.1 AGTCCGATCAGAATTGGGATTTAATTCTTCGAACTGTGCTGGAAGATATCAAAGCCGTACTGATTTACTCAACTGAACGCATCGAAAAAGCGATCCAGAGCTATATCAATAAGTTAGCGCAAAAATAATTTGGAAACGATCTCATTCTAAATGGTGCTACAAGCAAAACTTCACACTTAGTACATACGT 213 5944410 0.982954048 25 191 1452 0.911290323 1.655138435 0.177419355 0.14084507 0.262096774 213 18 4 226 X:5944260-5944448 8 CG12728 FBtr0070859|FBtr0343052 5944386|5944386 5944622|5945250 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" X + 5944287 5944441 stop_codon CG12728 FlyBase G44671.1 TTCGAACTGTGCTGGAAGATATCAAAGCCGTACTGATTTACTCAACTGAACGCATCGAAAAAGCGATCCAGAGCTATATCAATAAGTTAGCGCAAAAATAATTTGGAAACGATCTCATTCTAAATGGTGCTACAAGCAAAACTTCACACTTAGTA 125 5944410 0.855694508 20 113 848 0.920903955 1.367089564 0.169491525 0.304 0.508474576 125 8 6 163 X:5944287-5944441 8 76 4440 FBgn0029825 316.1666667 16.35666667 25.15 0.240379547 4.646423477 3.021868787 1 1 1 0.15 dme-miR-184-5p 6mer3-8 TGATAA X 5944674 5944679 + X_5944674_5944679_+ 0.999990658 0.882042186 0.941016422 0.083402184 CG12728 FBtr0343052 5944386 5945250 X + 5944654 5944764 3'utr CG12728 FlyBase G59049.1 TGACAAACACAAATCCTCAGTGATAAAAGGATAAAGACATGATTCCATTTGTTGATTAGGTATTCGTACCTAAGTCCATCGAACAGCAATCAAATGAAACAAAACAATGTA 17 5944670 0.997549383 7 15 84 0.888888889 1.204119983 0.222222222 0.058823529 0.111111111 17 2 0 16 X:5944654-5944764 6 CG12728 FBtr0343052 5944386 5945250 TGATAA 6mer3-8 dme-miR-184-5p X + 5944662 5944690 3'utr CG12728 FlyBase G44674.1 ACAAATCCTCAGTGATAAAAGGATAAAGA 7 5944670 0.691150553 3 6 26 0.9 0.653212514 0.3 0.428571429 0.6 7 0 1 9 X:5944662-5944690 6 8 4441 FBgn0029825 316.1666667 16.35666667 25.15 0.02530311 0.489097208 0.318091451 4 4 4 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 5944791 5944796 + X_5944791_5944796_+ 0.998190347 0.998125549 0.998157948 4.58E-05 CG12728 FBtr0343052 5944386 5945250 X + 5944766 5944823 3'utr CG12728 FlyBase G59050.1 AGTGTTGTAGATTTTAAAACGTCTTACCAAAACACCCTCAGTACACAAACAAGTTGAG 6 5944789 0.948365264 3 4 29 0.857142857 0.77815125 0.285714286 0.166666667 0.285714286 6 1 0 6 X:5944766-5944823 6 CG12728 FBtr0343052 5944386 5945250 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 5944758 5944806 3'utr CG12728 FlyBase G44675.1 CAATGTATAGTGTTGTAGATTTTAAAACGTCTTACCAAAACACCCTCAG 10 5944790 0.916403571 4 10 40 1 1.204119983 0.125 0.6 0.75 10 0 0 16 X:5944758-5944806 6 6.5 4442 FBgn0029825 316.1666667 16.35666667 25.15 0.020558777 0.397391482 0.258449304 2 1 1.5 0.15 dme-miR-190-5p 7mer-m8 ACATATC X 5944866 5944872 + X_5944866_5944872_+ 0.402014763 0.674449731 0.538232247 0.192640565 CG12728 FBtr0343052 5944386 5945250 X + 5944841 5944874 3'utr CG12728 FlyBase G59051.1 AGCAACTAACTCCTATCTCTATGGAACATATCGA 7 5944861 0.809044662 3 6 39 0.857142857 0.77815125 0.285714286 0 0 7 1 0 6 X:5944841-5944874 7 CG12728 FBtr0343052 5944386 5945250 ACATATC 7mer-m8 dme-miR-190-5p X + 5944829 5944868 3'utr CG12728 FlyBase G44676.1 TTGCATAGAAGCAGCAACTAACTCCTATCTCTATGGAACA 5 5944857 0.978181009 2 4 29 0.875 0.84509804 0 0.4 0.625 5 1 0 7 X:5944829-5944868 3 3.5 4443 FBgn0029825 316.1666667 16.35666667 25.15 0.011070111 0.213980029 0.13916501 5 9 7 0.15 dme-miR-33-5p 7mer-m8 CAATGCA X 5944970 5944976 + X_5944970_5944976_+ 0.57178374 0.633102097 0.602442919 0.043358656 CG12728 FBtr0343052 5944386 5945250 X + 5944927 5944995 3'utr CG12728 FlyBase G59052.1 CGACCGATTAGTCAGGGCTTTCCAGCGGTTATAACCTCCTGATCAATGCATTTTATGTTAAATATTTTT 55 5944969 0.809215622 11 52 463 0.940298507 1.322219295 0.014925373 0.163636364 0.313432836 55 2 2 63 X:5944927-5944995 7 CG12728 FBtr0343052 5944386 5945250 CAATGCA 7mer-m8 dme-miR-33-5p X + 5944935 5944990 3'utr CG12728 FlyBase G44677.1 TAGTCAGGGCTTTCCAGCGGTTATAACCTCCTGATCAATGCATTTTATGTTAAATA 38 5944969 0.820869976 8 36 286 0.953125 1.183269844 0.03125 0.447368421 0.671875 38 0 3 61 X:5944935-5944990 7 43 4444 FBgn0029825 316.1666667 16.35666667 25.15 0.136004217 2.628897493 1.709741551 1 1 1 0.15 dme-bantam-3p 6mer3-8 TGATCT X 5945238 5945243 + X_5945238_5945243_+ 0.997237909 0.99998363 0.998610769 0.001941503 CG12728 FBtr0343052 5944386 5945250 X + 5945219 5945256 3'utr CG12728 FlyBase G59054.1 GGTGGGTCACAACTATAACTGATCTACACATTTAGGAT 6 5945237 0.965830062 4 6 33 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 X:5945219-5945256 6 CG12728 FBtr0343052 5944386 5945250 TGATCT 6mer3-8 dme-bantam-3p X + 5945202 5945247 3'utr CG12728 FlyBase G44679.1 AATGTGTTGTTCCCATCGGTGGGTCACAACTATAACTGATCTACAC 11 5945239 0.721349094 5 10 63 0.933333333 0.84509804 0 0.363636364 0.533333333 11 0 1 14 X:5945202-5945247 6 7 4445 FBgn0029825 316.1666667 16.35666667 25.15 0.022140221 0.427960057 0.27833002 1 -1 0 0.15 dme-miR-988-3p 6mer3-8 ACAAGG X 5947522 5947527 + X_5947522_5947527_+ 0.99999851 0.991967193 0.995982851 0.005678987 CG32756 FBtr0070860|FBtr0343295 5947414|5947414 5947851|5948353 X + 5947487 5947544 3'utr CG32756 FlyBase G59066.1 TTTTTTTTTTGAGATAAAAACAAATCCTCAGTGATACAAGGATAAAAGACATGATTCC 20 5947520 0.973748021 7 16 80 0.826086957 0.977723605 0.217391304 0.15 0.260869565 20 3 1 19 X:5947487-5947544 6 CG32756 FBtr0343295|FBtr0070860 5947414|5947414 5948353|5947851 ACAAGG 6mer3-8 dme-miR-988-3p X + 5947502 5947560 3'utr CG32756 FlyBase G44688.1 AAAAACAAATCCTCAGTGATACAAGGATAAAAGACATGATTCCATTTGTTGATTAGGTA 11 5947521 0.949583396 5 9 56 0.947368421 1.255272505 0.315789474 0.454545455 0.684210526 11 1 0 18 X:5947502-5947560 6 13.5 4446 FBgn0052756 250.4866667 13.61 20.71333333 0.053895084 0.991917708 0.651754104 2 1 1.5 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 5947639 5947644 + X_5947639_5947644_+ 0.961954434 0.998735061 0.980344747 0.026007882 CG32756 FBtr0070860|FBtr0343295 5947414|5947414 5947851|5948353 X + 5947590 5947663 3'utr CG32756 FlyBase G59067.1 AAATGAAACAAAACAATGTATAGTGTTGTAGATTTTAAAACGACATCTTACCAAAACACCCTCAGTACACAAAC 36 5947638 0.952006227 9 34 152 0.974358974 1.579783597 0.051282051 0.083333333 0.153846154 36 1 0 38 X:5947590-5947663 6 CG32756 FBtr0343295|FBtr0070860 5947414|5947414 5948353|5947851 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 5947627 5947663 3'utr CG32756 FlyBase G44689.1 AAACGACATCTTACCAAAACACCCTCAGTACACAAAC 21 5947638 0.702096727 3 19 63 0.942857143 1.51851394 0.028571429 0.476190476 0.685714286 21 2 0 33 X:5947627-5947663 6 25 4447 FBgn0052756 250.4866667 13.61 20.71333333 0.099805712 1.836884644 1.206952044 1 1 1 0.15 dme-miR-283-5p 8mer-A1 TGATATTA X 5947724 5947731 + X_5947724_5947731_+ 0.591759813 0.59118155 0.591470681 0.00040892 CG32756 FBtr0070860|FBtr0343295 5947414|5947414 5947851|5948353 X + 5947686 5947748 3'utr CG32756 FlyBase G59068.1 AGCAGCAACTAACTCCTATCTCTATGGAACATATCGACTGATATTAAAATGCGTCCGATTAGT 152 5947727 0.693801718 11 145 926 0.960591133 2.290034611 0.009852217 0.276315789 0.458128079 152 8 0 195 X:5947686-5947748 8 CG32756 FBtr0343295|FBtr0070860 5947414|5947414 5948353|5947851 TGATATTA 8mer-A1 dme-miR-283-5p X + 5947695 5947791 3'utr CG32756 FlyBase G44690.1 TAACTCCTATCTCTATGGAACATATCGACTGATATTAAAATGCGTCCGATTAGTCACGGCTTTCCAACGGTTATAGCCTCCTGATCAATGCATTTTA 131 5947727 0.616512411 12 125 830 0.967032967 1.944482672 0.027472527 0.290076336 0.489010989 131 5 1 176 X:5947695-5947791 8 135 4448 FBgn0052756 250.4866667 13.61 20.71333333 0.538950842 9.919177076 6.517541036 -3 -3 -3 0.15 dme-miR-1003-3p 7mer-A1 TGTGAGA X 6008577 6008583 - X_6008577_6008583_- 0.815325155 0.815619013 0.815472084 0.000207748 mab-21 FBtr0070890 6008181 6008807 X - 6008374 6008654 3'utr mab-21 FlyBase G65024.1 TCTACAACTAAAGACAAAGGATCGCAAGGATCAAGGGCGCTGGGAGGGTCGAAGCTGGAGAAGGAGAAATGTGTGAGAAAGATAGAGAGAAAGCAGTGAAATTGTAACCCAAATACTATTTGATATTTCGCTAGATCGTAACTTAAGTTTAGGTGCTTTCGAAAAGTATACGCCGCTTACAGAGTTTCCTATAATTAGAGCATACTTAGTGTTATCCATTTAGATCGTCATCGTCGCAAAACGCACAAAAGTTACCAACTAGTTACATTTGTATGTACGAC 1232 6008585 0.955179246 64 1147 6608 0.932238193 2.134177108 0.248459959 0.151785714 0.284736482 1232 90 9 1362 X:6008374-6008654 7 mab-21 FBtr0070890 6008181 6008807 TGTGAGA 7mer-A1 dme-miR-1003-3p X - 6008360 6008665 3'utr mab-21 FlyBase G49003.1 GATTTTTTTTTTCTACAACTAAAGACAAAGGATCGCAAGGATCAAGGGCGCTGGGAGGGTCGAAGCTGGAGAAGGAGAAATGTGTGAGAAAGATAGAGAGAAAGCAGTGAAATTGTAACCCAAATACTATTTGATATTTCGCTAGATCGTAACTTAAGTTTAGGTGCTTTCGAAAAGTATACGCCGCTTACAGAGTTTCCTATAATTAGAGCATACTTAGTGTTATCCATTTAGATCGTCATCGTCGCAAAACGCACAAAAGTTACCAACTAGTTACATTTGTATGTACGACATTTTTTTTTTTTT 825 6008585 0.966336813 55 753 4017 0.915213946 1.916453949 0.270206022 0.375757576 0.591917591 825 94 13 1155 X:6008360-6008665 7 536.5 4449 FBgn0029003 3 0.19 0.303333333 178.8333333 2823.684211 1768.681319 2 2 2 0.15 dme-miR-14-3p 8mer-A1 AAGACTGA X 6035871 6035878 - X_6035871_6035878_- 0.640354545 0.643512124 0.641933335 0.00223276 rux FBtr0307288|FBtr0070889 6035751|6035751 6035992|6035992 X - 6035849 6035893 3'utr rux FlyBase G65031.1 CGTAATTATTTGAACAAGACTGATTGCACCCGCTTTGGTTCCGCT 68 6035870 0.719913162 9 60 454 0.897435897 1.544068044 0.012820513 0.117647059 0.230769231 68 7 1 70 X:6035849-6035893 8 rux FBtr0307288|FBtr0070889 6035751|6035751 6035992|6035992 AAGACTGA 8mer-A1 dme-miR-14-3p X - 6035850 6035893 3'utr rux FlyBase G49011.1 CGTAATTATTTGAACAAGACTGATTGCACCCGCTTTGGTTCCGC 66 6035870 0.689173382 6 57 431 0.852941176 1.939519253 0.068627451 0.46969697 0.656862745 66 15 0 87 X:6035850-6035893 8 66.5 4450 FBgn0003302 80.70666667 7.456666667 11.36 0.823971584 8.91819401 5.853873239 -8 -8 -8 0.15 dme-miR-79-3p 6mer3-8 TAGCTT X 610727 610732 - X_610727_610732_- 0.618100902 0.51498115 0.566541026 0.07291671 CG13366 FBtr0339433|FBtr0110791|FBtr0339431|FBtr0339432|FBtr0070161|FBtr0339430 610547|610547|610547|610547|610547|610547 611251|611251|611251|611251|611251|611251 X - 610664 610771 3'utr CG13366 FlyBase G63849.1 ATTTTAATGCGTAAATCGACGATTGAGCTGGACGATGATTAGCTTGACGACGAAACATTACTATACAGATAATAAGGAGATGGACTAGCTTTAGCGTATATATAACTA 28 610733 0.970531813 8 27 161 1 1.477121255 0.333333333 0.071428571 0.133333333 28 0 0 30 X:610664-610771 6 CG13366 FBtr0110791|FBtr0339433|FBtr0339430|FBtr0070161|FBtr0339432|FBtr0339431 610547|610547|610547|610547|610547|610547 611251|611251|611251|611251|611251|611251 TAGCTT 6mer3-8 dme-miR-79-3p X - 610715 610746 3'utr CG13366 FlyBase G48126.1 AGCTGGACGATGATTAGCTTGACGACGAAACA 5 610733 0.942176047 3 5 23 1 0.84509804 0.571428571 0.4 0.571428571 5 0 0 7 X:610715-610746 6 11 4451 FBgn0025633 323.6666667 8.64 13.25333333 0.033985582 1.273148148 0.829979879 1 1 1 0.15 dme-miR-190-5p 6mer2-7 CATATC X 611021 611026 - X_611021_611026_- 0.889948968 0.998768773 0.94435887 0.076947219 CG13366 FBtr0339433|FBtr0110791|FBtr0339431|FBtr0339432|FBtr0070161|FBtr0339430 610547|610547|610547|610547|610547|610547 611251|611251|611251|611251|611251|611251 X - 610953 611093 3'utr CG13366 FlyBase G63851.1 TCTCCAATTCCTCTAGCTTGTACACTTTTTTCCTGTAAAGCCTCTTCTGCTTTAGTGCGTCTGATTCCATATCCTTGCCCATGTATAATGGTCGTCCGATGCAGCGCCCCATATTCAGACATCGCTACTTTTAAATATCAT 22 611040 0.989923359 14 19 196 0.923076923 1.079181246 0.153846154 0.181818182 0.307692308 22 1 1 24 X:610953-611093 6 CG13366 FBtr0110791|FBtr0339433|FBtr0339430|FBtr0070161|FBtr0339432|FBtr0339431 610547|610547|610547|610547|610547|610547 611251|611251|611251|611251|611251|611251 CATATC 6mer2-7 dme-miR-190-5p X - 610981 611067 3'utr CG13366 FlyBase G48128.1 TTTTTCCTGTAAAGCCTCTTCTGCTTTAGTGCGTCTGATTCCATATCCTTGCCCATGTATAATGGTCGTCCGATGCAGCGCCCCATA 12 611038 0.986741672 7 11 111 0.9375 1.176091259 0 0.333333333 0.5 12 1 0 15 X:610981-611067 6 6.5 4452 FBgn0025633 323.6666667 8.64 13.25333333 0.020082389 0.752314815 0.490442656 14 12 13 0.15 dme-miR-8-3p 7mer-A1 AGTATTA X 6223122 6223128 - X_6223122_6223128_- 0.823204713 0.823328964 0.823266839 8.79E-05 sqh FBtr0339502|FBtr0339503|FBtr0070877|FBtr0339504|FBtr0345294 6223059|6223059|6223059|6223059|6223059 6223406|6223406|6223406|6223406|6223406 X - 6223103 6223220 3'utr sqh FlyBase G65056.2 AGTAGCCAACACCAGCGATTGTTATGTACGACAGTGTAGTGTGTGAGATGTTGGTGCCAGATAACACGATTTCCCGAAAAACTCCTTTCATAAGTATTAACTCATTGAATATACATAT 78 6223130 0.762012548 24 73 558 0.955555556 1.934498451 0.088888889 0.128205128 0.244444444 78 4 0 86 X:6223103-6223220 7 sqh FBtr0345294|FBtr0070877|FBtr0339504|FBtr0339502|FBtr0339503 6223059|6223059|6223059|6223059|6223059 6223406|6223406|6223406|6223406|6223406 AGTATTA 7mer-A1 dme-miR-8-3p X - 6223068 6223188 3'utr sqh FlyBase G49023.1 AGTGTAGTGTGTGAGATGTTGGTGCCAGATAACACGATTTCCCGAAAAACTCCTTTCATAAGTATTAACTCATTGAATATACATATATATTACCTATATACAAATACATACTTATACAAGA 48 6223130 0.985277353 16 44 360 0.942857143 1.51851394 0.185714286 0.291666667 0.514285714 48 3 1 66 X:6223068-6223188 7 38 4453 FBgn0003514 2178.836667 260.73 395.3566667 0.0174405 0.14574464 0.096115744 2 2 2 0.15 dme-miR-252-5p 7mer-m8 GTACTTA X 6223245 6223251 - X_6223245_6223251_- 0.57307645 0.584315473 0.578695961 0.007947173 sqh FBtr0339502|FBtr0339503|FBtr0070877|FBtr0339504|FBtr0345294 6223059|6223059|6223059|6223059|6223059 6223406|6223406|6223406|6223406|6223406 X - 6223232 6223290 3'utr sqh FlyBase G65057.1 TGGTTTCGCGCCTTCTGTTCTTTGATTCCTGATAATCCTGTACTTATCCGTGCATTTGA 34 6223252 0.743927985 11 31 313 0.921052632 1.544068044 0.263157895 0.117647059 0.210526316 34 3 0 35 X:6223232-6223290 7 sqh FBtr0345294|FBtr0070877|FBtr0339504|FBtr0339502|FBtr0339503 6223059|6223059|6223059|6223059|6223059 6223406|6223406|6223406|6223406|6223406 GTACTTA 7mer-m8 dme-miR-252-5p X - 6223197 6223299 3'utr sqh FlyBase G49024.1 TTTTTTTTTTGGTTTCGCGCCTTCTGTTCTTTGATTCCTGATAATCCTGTACTTATCCGTGCATTTGAATTAAACAAAAAGTAGCCAACACCAGCGATTGTTA 28 6223252 0.989476832 14 27 256 0.973684211 1.568201724 0.368421053 0.321428571 0.5 28 1 0 37 X:6223197-6223299 7 19.5 4454 FBgn0003514 2178.836667 260.73 395.3566667 0.00894973 0.074790013 0.049322553 1 1 1 0.15 dme-miR-999-3p 6mer3-8 AGTTAA X 622751 622756 + X_622751_622756_+ 0.670136313 0.768979421 0.719557867 0.069892626 mod(r) FBtr0089724|FBtr0335123|FBtr0335122|FBtr0089725|FBtr0089723|FBtr0089726 622627|622627|622627|622627|622627|622627 623051|623051|623051|623051|623051|623051 X + 622733 622779 3'utr mod(r) FlyBase G57775.1 AATGTTAGTAAATAGAGAAGTTAAGCCAGAGATGGGGCGACATAATC 81 622754 0.809606532 3 79 290 0.976744186 1.924279286 0.511627907 0.061728395 0.11627907 81 2 0 84 X:622733-622779 6 mod(r) FBtr0089723|FBtr0089726|FBtr0335122|FBtr0089725|FBtr0089724|FBtr0335123 622627|622627|622627|622627|622627|622627 623051|623051|623051|623051|623051|623051 AGTTAA 6mer3-8 dme-miR-999-3p X + 622738 622777 3'utr mod(r) FlyBase G43710.1 TAGTAAATAGAGAAGTTAAGCCAGAGATGGGGCGACATAA 43 622754 0.762791703 3 42 138 0.984375 1.799340549 0.625 0.348837209 0.5625 43 1 0 63 X:622738-622777 6 61 4455 FBgn0016038 99 9.14 14.07333333 0.616161616 6.673960613 4.334438655 -3 -3 -3 0.15 dme-miR-305-3p 8mer-m1 ATGTGCCG X 6232071 6232078 + X_6232071_6232078_+ 0.623768868 0.627781574 0.625775221 0.002837407 CG14446 FBtr0339696|FBtr0307164|FBtr0307165|FBtr0339697 6231056|6231056|6231056|6231317 6236218|6236004|6233166|6233166 X + 6232044 6232122 5'utr CG14446 FlyBase G59085.1 GTTAAGAGAAAGAGGAGAGTTTCCAAAATGTGCCGGGCACCGCTCCCAAAAGTCGCTAGAACTTAAAAACTGAATAATA 20 6232073 0.941481757 8 18 74 0.9 1.255272505 0.05 0 0 20 2 0 18 X:6232044-6232122 8 CG14446 FBtr0339697|FBtr0307165|FBtr0307164|FBtr0339696 6231317|6231056|6231056|6231056 6233166|6233166|6236004|6236218 ATGTGCCG 8mer-m1 dme-miR-305-3p X + 6232061 6232104 5'utr CG14446 FlyBase G44702.1 AGTTTCCAAAATGTGCCGGGCACCGCTCCCAAAAGTCGCTAGAA 8 6232072 0.917495496 3 6 22 0.888888889 0.903089987 0.111111111 0.125 0.222222222 8 1 0 8 X:6232061-6232104 8 9.5 4456 FBgn0262730 931.1666667 14.78666667 22.41333333 0.010202255 0.642470694 0.423854848 -2 -1 -1.5 0.15 dme-miR-1007-3p 7mer-m8 TGAGCTT X 6232393 6232399 + X_6232393_6232399_+ 0.59949791 0.601512671 0.60050529 0.001424679 CG14446 FBtr0339696|FBtr0307164|FBtr0307165|FBtr0339697 6231056|6231056|6231056|6231317 6236218|6236004|6233166|6233166 X + 6232366 6232430 5'utr CG14446 FlyBase G59087.1 AGATCACAAATAATATATAGACGCTTATGAGCTTTATTTGATCGATTGCATTGAAAAGGAAGCAG 54 6232393 0.781181534 7 51 419 0.956521739 1.51851394 0.420289855 0.240740741 0.405797101 54 2 1 66 X:6232366-6232430 7 CG14446 FBtr0339697|FBtr0307165|FBtr0307164|FBtr0339696 6231317|6231056|6231056|6231056 6233166|6233166|6236004|6236218 TGAGCTT 7mer-m8 dme-miR-1007-3p X + 6232373 6232445 5'utr CG14446 FlyBase G44703.1 AAATAATATATAGACGCTTATGAGCTTTATTTGATCGATTGCATTGAAAAGGAAGCAGCTAAAAGCAGAACAG 49 6232393 0.985362777 5 48 396 0.987951807 1.612783857 0.457831325 0.469387755 0.686746988 49 0 1 82 X:6232373-6232445 7 41 4457 FBgn0262730 931.1666667 14.78666667 22.41333333 0.044030786 2.77276826 1.829268293 0 0 0 0.15 dme-miR-277-3p 6mer3-8 TGCATT X 6233374 6233379 + X_6233374_6233379_+ 0.664404613 0.515550591 0.589977602 0.105255673 CG14446 FBtr0339696|FBtr0307164 6231056|6231056 6236218|6236004 X + 6233350 6233483 3'utr CG14446 FlyBase G59093.1 GAGGCCCACAATGAAGCGCACGAATGCATTGTTTGTAAACTAAATTTGTAGTCCTTGTCAGACGCTCGGACATCTAGTGCACTGTATACTGTACATAACGTGTTGAAAGTGCAGTGCGTTTCGCGGCCATAAGG 19 6233378 0.966626645 12 18 100 0.947368421 1.255272505 0.526315789 0 0 19 1 0 18 X:6233350-6233483 6 CG14446 FBtr0307164|FBtr0339696 6231056|6231056 6236004|6236218 TGCATT 6mer3-8 dme-miR-277-3p X + 6233357 6233383 3'utr CG14446 FlyBase G44708.1 ACAATGAAGCGCACGAATGCATTGTTT 5 6233378 0.580559079 3 5 23 1 0.903089987 0.375 0.4 0.625 5 0 0 8 X:6233357-6233383 6 6.5 4458 FBgn0262730 931.1666667 14.78666667 22.41333333 0.00698049 0.439585212 0.290005949 -4 -4 -4 0.15 dme-bantam-3p 6mer2-7 GATCTC X 6233535 6233540 + X_6233535_6233540_+ 0.998814365 0.963245888 0.981030126 0.025150728 CG14446 FBtr0339696|FBtr0307164 6231056|6231056 6236218|6236004 X + 6233511 6233628 3'utr CG14446 FlyBase G59094.1 AGAGTCTTTGAATTAACTGAAATAGATCTCGACTTGGTCTTATAGCACGCAAACGCACTGTACCGTATTATTATACTTAGTCCTGAGTTGCTCCCTATCGATCTAAGGACTGCAAAGA 8 6233531 0.97316662 8 8 59 1 0.903089987 0 0 0 8 0 0 8 X:6233511-6233628 6 CG14446 FBtr0307164|FBtr0339696 6231056|6231056 6236004|6236218 GATCTC 6mer2-7 dme-bantam-3p X + 6233520 6233545 3'utr CG14446 FlyBase G44709.1 GAATTAACTGAAATAGATCTCGACTT 4 6233533 0.845280577 2 2 22 0.8 0.602059991 0 0.25 0.4 4 1 0 4 X:6233520-6233545 6 4 4459 FBgn0262730 931.1666667 14.78666667 22.41333333 0.004295686 0.270513977 0.178465199 4 2 3 0.15 dme-miR-34-5p 8mer-A1 CACTGCCA X 6233806 6233813 + X_6233806_6233813_+ 0.677371115 0.677158018 0.677264566 0.000150684 CG14446 FBtr0339696|FBtr0307164 6231056|6231056 6236218|6236004 X + 6233783 6234107 3'utr CG14446 FlyBase G59096.1 CACACACACTCTCAGTCGAGCTGCACTGCCATTGGTGAAAGTGAAAATGAGATTTAGGCCTATTGAAGCTTCCAGCATTTACCAGTGCCATAACTTTATAACTTTATATAACTTTACCCGCACGCCCAGCCCAGCCCAGTATGCCGATCAATCCGATCGATTGATCTCGGCTAGCATCGAGCTTAGCACTAGCTTTCTTCCGAGCTTGCTTGTTGGACAGACAGTGAGAACGAACGAAGAGACATCAGCCTCCATCCATTAAAGAACTTAGTCTTAGCCGATCTGGAGTCCAAAATTTCATTGGAAATTCCGCCATGCGGATCGG 125 6233814 0.97123952 35 119 742 0.95483871 1.86923172 0.367741935 0.2 0.35483871 125 6 1 148 X:6233783-6234107 8 CG14446 FBtr0307164|FBtr0339696 6231056|6231056 6236004|6236218 CACTGCCA 8mer-A1 dme-miR-34-5p X + 6233761 6233894 3'utr CG14446 FlyBase G44711.1 ATCGAAACATACACCAACACACCACACACACTCTCAGTCGAGCTGCACTGCCATTGGTGAAAGTGAAAATGAGATTTAGGCCTATTGAAGCTTCCAGCATTTACCAGTGCCATAACTTTATAACTTTATATAAC 44 6233814 0.971073238 12 42 245 0.948051948 1.86332286 0.480519481 0.454545455 0.688311688 44 4 0 73 X:6233761-6233894 8 34 4460 FBgn0262730 931.1666667 14.78666667 22.41333333 0.036513335 2.299368801 1.516954194 -8 -8 -8 0.15 dme-miR-33-5p 8mer-A1 CAATGCAA X 6234242 6234249 + X_6234242_6234249_+ 0.63398687 0.625961902 0.629974386 0.005674532 CG14446 FBtr0339696|FBtr0307164 6231056|6231056 6236218|6236004 X + 6234131 6234266 3'utr CG14446 FlyBase G59097.1 GGCGTGAGGCGATTGATGACTATTAGCATTTTTAATCTAGACAAATGCTTGGCTTCAATTCGCGGATCGGCTTAATCCTTCTTGTACTTGTATGTATGTGTTTAACGATTCCAATGCAAAGACTTTTATATATCTT 66 6234256 0.985656986 16 62 513 0.949367089 1.875061263 0.151898734 0.151515152 0.291139241 66 4 0 75 X:6234131-6234266 8 CG14446 FBtr0307164|FBtr0339696 6231056|6231056 6236004|6236218 CAATGCAA 8mer-A1 dme-miR-33-5p X + 6234179 6234274 3'utr CG14446 FlyBase G44713.1 TTGGCTTCAATTCGCGGATCGGCTTAATCCTTCTTGTACTTGTATGTATGTGTTTAACGATTCCAATGCAAAGACTTTTATATATCTTTTTTTTTT 62 6234256 0.744168607 13 58 510 0.951807229 1.420505837 0.072289157 0.290322581 0.469879518 62 2 2 79 X:6234179-6234274 8 46 4461 FBgn0262730 931.1666667 14.78666667 22.41333333 0.049400394 3.11091073 2.052349792 -14 -14 -14 0.15 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 6234381 6234388 + X_6234381_6234388_+ 0.631136635 0.631136605 0.63113662 0 CG14446 FBtr0339696|FBtr0307164 6231056|6231056 6236218|6236004 X + 6234332 6234424 3'utr CG14446 FlyBase G59098.1 TATTGTTTAGCATGTTTCGACTGCAATTTAAGCCGAATTTTAGATCTTCTCTAGTCAGTTCAAAGCGTTTTTTGTTCGTTTTGTCACGCCCAT 71 6234380 0.986109137 16 62 598 0.894117647 1.579783597 0.164705882 0.183098592 0.317647059 71 8 1 76 X:6234332-6234424 8 CG14446 FBtr0307164|FBtr0339696 6231056|6231056 6236004|6236218 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X + 6234328 6234400 3'utr CG14446 FlyBase G44714.1 ACATTATTGTTTAGCATGTTTCGACTGCAATTTAAGCCGAATTTTAGATCTTCTCTAGTCAGTTCAAAGCGTT 47 6234380 0.989183898 12 41 394 0.904109589 1.217483944 0.191780822 0.446808511 0.643835616 47 4 3 66 X:6234328-6234400 8 53 4462 FBgn0262730 931.1666667 14.78666667 22.41333333 0.056917845 3.584310189 2.364663891 1 1 1 0.15 dme-miR-1008-3p 6mer3-8 AGCTGT X 6234539 6234544 + X_6234539_6234544_+ 0.996603052 0.956590396 0.976596724 0.028293252 CG14446 FBtr0339696|FBtr0307164 6231056|6231056 6236218|6236004 X + 6234513 6234557 3'utr CG14446 FlyBase G59099.1 CTGCCACGCCCCCGCCCCTAAACCTAAGCTGTATGTACTTGTATG 11 6234531 0.898269003 2 10 34 0.909090909 1 0.272727273 0 0 11 1 0 10 X:6234513-6234557 6 CG14446 FBtr0307164|FBtr0339696 6231056|6231056 6236004|6236218 AGCTGT 6mer3-8 dme-miR-1008-3p X + 6234525 6234558 3'utr CG14446 FlyBase G44716.1 CGCCCCTAAACCTAAGCTGTATGTACTTGTATGT 7 6234546 0.982149164 2 6 55 0.818181818 0.954242509 0.363636364 0.571428571 0.727272727 7 2 0 9 X:6234525-6234558 6 6 4463 FBgn0262730 931.1666667 14.78666667 22.41333333 0.00644353 0.405770965 0.267697799 8 -7 0.5 0.15 dme-miR-92b-3p 6mer3-8 GTGCAA X 6240861 6240866 - X_6240861_6240866_- 0.81199897 0.980275697 0.896137333 0.118989596 Rbcn-3A FBtr0303341 6240743 6241463 X - 6240836 6240885 3'utr Rbcn-3A FlyBase G65066.1 TGTCTTTATGTTGAGCTTTGTGCAAAAATTTGTCTGTTGTTGAATCAATC 18 6240868 0.984502225 5 18 152 1 1.361727836 0.260869565 0.277777778 0.434782609 18 0 0 23 X:6240836-6240885 6 Rbcn-3A FBtr0303341 6240743 6241463 GTGCAA 6mer3-8 dme-miR-92b-3p X - 6240812 6240885 3'utr Rbcn-3A FlyBase G49033.1 TGTCTTTATGTTGAGCTTTGTGCAAAAATTTGTCTGTTGTTGAATCAATCAAGATATATGTATACCTAAAACGA 23 6240868 0.986006175 9 22 188 1 1.531478917 0.205882353 0.434782609 0.617647059 23 0 0 34 X:6240812-6240885 6 19 4464 FBgn0023458 2065.706667 22.39 34.44 0.009197821 0.848593122 0.551684088 2 2 2 0.15 dme-miR-305-5p 7mer-A1 GTACAAA X 6274987 6274993 - X_6274987_6274993_- 0.779799514 0.773572159 0.776685837 0.004403366 CG3566 FBtr0305177|FBtr0089869|FBtr0089870 6274970|6274970|6274970 6275335|6276223|6275082 X - 6274975 6275005 3'utr CG3566 FlyBase G65122.1 ACGAAATAAATTGTACAAATTGCTTAAATTA 30 6274995 0.717764319 4 30 173 1 1.653212514 0.533333333 0.366666667 0.577777778 30 0 0 45 X:6274975-6275005 7 CG3566 FBtr0089869|FBtr0089870|FBtr0305177 6274970|6274970|6274970 6276223|6275082|6275335 GTACAAA 7mer-A1 dme-miR-305-5p X - 6274976 6275010 3'utr CG3566 FlyBase G49066.1 TTGACACGAAATAAATTGTACAAATTGCTTAAATT 16 6274995 0.731151875 3 16 87 1 1.255272505 0.277777778 0.125 0.222222222 16 0 0 18 X:6274976-6275010 7 22.5 4465 FBgn0029854 227.9933333 32.42666667 49.59666667 0.098687096 0.693873355 0.45365952 2 2 2 0.15 dme-bantam-3p 7mer-m8 TGATCTC X 6276109 6276115 - X_6276109_6276115_- 0.661615239 0.640527185 0.651071212 0.014911468 CG3566 FBtr0089869 6274970 6276223 X - 6276095 6276135 3'utr CG3566 FlyBase G65126.1 TTCTCCGCTCCCACACGGATTGATCTCCTTATCTCGCTAGA 13 6276107 0.693798181 2 13 88 1 1.113943352 0 0 0 13 0 0 13 X:6276095-6276135 7 CG3566 FBtr0089869 6274970 6276223 TGATCTC 7mer-m8 dme-bantam-3p X - 6276096 6276130 3'utr CG3566 FlyBase G49070.1 CGCTCCCACACGGATTGATCTCCTTATCTCGCTAG 5 6276116 0.867292799 2 5 34 1 0.954242509 0 0.6 0.777777778 5 0 0 9 X:6276096-6276130 7 9 4466 FBgn0029854 227.9933333 32.42666667 49.59666667 0.039474838 0.277549342 0.181463808 -8 1 -3.5 0.15 dme-miR-980-3p 8mer-A1 GGCAGCTA X 6298611 6298618 + X_6298611_6298618_+ 0.64281885 0.652902811 0.647860831 0.007130394 CG3815 FBtr0070899 6298491 6298970 X + 6298545 6298695 3'utr CG3815 FlyBase G59160.1 AAGACACAGAAACATATACGCGCTCAACCGCAGCCAACTCCAGTGGAGCAGCACCAATCTCAGTGGGGCAGCTAGCAGCCAGGCATAGGGTTAGGGTTAGCAGATACCAGTTCAACTTCATCGCATCAATCATCGCAATGCAAAGCCTCGG 86 6298608 0.896491981 10 82 265 0.959183673 1.496006599 0.397959184 0.127906977 0.234693878 86 2 2 94 X:6298545-6298695 8 CG3815 FBtr0070899 6298491 6298970 GGCAGCTA 8mer-A1 dme-miR-980-3p X + 6298545 6298703 3'utr CG3815 FlyBase G44756.1 AAGACACAGAAACATATACGCGCTCAACCGCAGCCAACTCCAGTGGAGCAGCACCAATCTCAGTGGGGCAGCTAGCAGCCAGGCATAGGGTTAGGGTTAGCAGATACCAGTTCAACTTCATCGCATCAATCATCGCAATGCAAAGCCTCGGCAGTACTT 56 6298608 0.998818654 8 53 170 0.957894737 1.959041392 0.378947368 0.535714286 0.726315789 56 4 0 91 X:6298545-6298703 8 43 4467 FBgn0029861 300.3333333 11.21333333 17.14666667 0.143174251 3.834720571 2.50777605 3 3 3 0.15 dme-miR-252-5p 7mer-m8 GTACTTA X 6299191 6299197 - X_6299191_6299197_- 0.576762543 0.575365028 0.576063786 0.000988182 CG12219 FBtr0070925 6299052 6299296 X - 6299167 6299219 3'utr CG12219 FlyBase G65165.1 TTGCATATTAGCCATACCGAATGTACTTATCCGACGTTTCGTGTACTCCACAA 80 6299198 0.871310806 3 79 523 0.989473684 1.973127854 0.010526316 0.1625 0.294736842 80 1 0 94 X:6299167-6299219 7 CG12219 FBtr0070925 6299052 6299296 GTACTTA 7mer-m8 dme-miR-252-5p X - 6299101 6299219 3'utr CG12219 FlyBase G49094.1 TTGCATATTAGCCATACCGAATGTACTTATCCGACGTTTCGTGTACTCCACAAAGTCAAGGCGTCCCGCCGCCTGGCACCTATTGTGTATACTCTTCTCGTTCTCTATAATGCCTTAAC 64 6299198 0.978817854 8 64 431 1 1.968482949 0.032258065 0.359375 0.559139785 64 0 0 93 X:6299101-6299219 7 69 4468 FBgn0043796 206.3333333 12.49333333 19.20666667 0.334410339 5.522945571 3.592502603 1 1 1 0.15 dme-miR-308-3p 8mer-m1 CTGTGATT X 633704 633711 - X_633704_633711_- 0.385522781 0.385508371 0.385515576 1.02E-05 Dredd FBtr0114561 633620 634524 X - 633651 633731 stop_codon Dredd FlyBase G63872.1 ACGTGTACTTTCCACCTCGTCTGTGATTTTGGTTTTTAACGTTAGCGCAGTTGTACGTCCACTCAAATTGCTCTATAAAGG 32 633704 0.991231728 6 28 296 0.9 1.556302501 0.075 0.21875 0.375 32 4 0 36 X:633651-633731 8 Dredd FBtr0114561 633620 634524 CTGTGATT 8mer-m1 dme-miR-308-3p X - 633657 633747 stop_codon Dredd FlyBase G48146.1 AGCACATTTCGCCAGCACGTGTACTTTCCACCTCGTCTGTGATTTTGGTTTTTAACGTTAGCGCAGTTGTACGTCCACTCAAATTGCTCTA 27 633704 0.991268941 10 25 269 0.906976744 1.591064607 0.023255814 0.407407407 0.627906977 27 4 0 39 X:633657-633747 8 23.5 4469 FBgn0020381 93.66666667 6.923333333 10.50666667 0.25088968 3.394318729 2.236675127 -7 -7 -7 0.15 dme-miR-1012-3p 7mer-m8 TTGACTA X 6360818 6360824 + X_6360818_6360824_+ 0.628352101 0.631525999 0.62993905 0.002244286 kdn FBtr0070906|FBtr0070907 6360362|6360362 6361323|6361323 X + 6360804 6360852 3'utr kdn FlyBase G59187.1 ATATATATATACGATTGACTATATATATAGGGACAGGCAGAGAGAGTAA 12 6360827 0.958975385 5 11 61 1 1.146128036 0.357142857 0.166666667 0.285714286 12 0 0 14 X:6360804-6360852 7 kdn FBtr0070906|FBtr0070907 6360362|6360362 6361323|6361323 TTGACTA 7mer-m8 dme-miR-1012-3p X + 6360802 6360865 3'utr kdn FlyBase G44782.1 ATATATATATATACGATTGACTATATATATAGGGACAGGCAGAGAGAGTAAAATGTTTGCGCCT 6 6360819 0.989375842 3 3 39 0.75 0.77815125 0.25 0.166666667 0.375 6 2 0 6 X:6360802-6360865 7 5.5 4470 FBgn0261955 413.3133333 20.16333333 31.04333333 0.013307096 0.272772359 0.177171695 -9 -1 -5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 6371106 6371111 - X_6371106_6371111_- 0.99942004 0.999575275 0.999497657 0.000109814 PpV FBtr0070921|FBtr0070921|FBtr0070921|FBtr0331430|FBtr0331430|FBtr0331430|FBtr0331431|FBtr0331431|FBtr0331431|FBtr0331432|FBtr0331432|FBtr0331432 6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063 6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728 X - 6371096 6371127 3'utr PpV FlyBase G65179.1 AAGAATAACCCAATTGTGTGATCCCGATCAAA 12 6371114 0.78320391 2 12 66 1 1.079181246 0.25 0 0 12 0 0 12 X:6371096-6371127 6 PpV FBtr0331431|FBtr0331431|FBtr0331431|FBtr0331432|FBtr0331432|FBtr0331432|FBtr0070921|FBtr0070921|FBtr0070921|FBtr0331430|FBtr0331430|FBtr0331430 6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063 6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 6371085 6371125 3'utr PpV FlyBase G49105.1 GAATAACCCAATTGTGTGATCCCGATCAAAACGATATGATT 10 6371113 0.967605388 3 10 54 1 1.041392685 0.181818182 0.1 0.181818182 10 0 0 11 X:6371085-6371125 6 11 4471 FBgn0003139 501.9866667 38.39333333 58.97333333 0.021912933 0.286508074 0.186524983 3 2 2.5 0.15 dme-bantam-3p 6mer3-8 TGATCT X 643393 643398 + X_643393_643398_+ 0.944438117 0.93422424 0.939331178 0.007222318 su(s) FBtr0340081|FBtr0340082|FBtr0070120 643340|643340|643340 643760|643760|643760 X + 643365 643458 3'utr su(s) FlyBase G57810.1 AAACGCAAAAGGAGCCCTTTTGCCCCAATGATCTTAAAGCGATGCTATGCCACATGACCCTTTCCCCCAACCATACCATACGTCGTGGAAAACT 434 643393 0.984289076 11 427 2834 0.980582524 2.703291378 0.440776699 0.156682028 0.289320388 434 10 0 505 X:643365-643458 6 su(s) FBtr0070120|FBtr0340082|FBtr0340081 643340|643340|643340 643760|643760|643760 TGATCT 6mer3-8 dme-bantam-3p X + 643365 643439 3'utr su(s) FlyBase G43734.1 AAACGCAAAAGGAGCCCTTTTGCCCCAATGATCTTAAAGCGATGCTATGCCACATGACCCTTTCCCCCAACCATA 246 643393 0.971579978 9 243 1535 0.988603989 2.540329475 0.49002849 0.321138211 0.524216524 246 4 0 347 X:643365-643439 6 333 4472 FBgn0003575 432.3133333 10.81666667 16.53666667 0.770274646 30.78582435 20.13706914 0 0 0 0.15 dme-miR-970-3p 6mer3-8 TCTTAT X 643567 643572 + X_643567_643572_+ 0.934952397 0.978363922 0.95665816 0.030696566 su(s) FBtr0340081|FBtr0340082|FBtr0070120 643340|643340|643340 643760|643760|643760 X + 643552 643581 3'utr su(s) FlyBase G57812.1 CGCTAGGTGTAAGGATCTTATTAGCTATAC 5 643572 0.644613676 3 5 34 1 0.698970004 0 0 0 5 0 0 5 X:643552-643581 6 su(s) FBtr0070120|FBtr0340082|FBtr0340081 643340|643340|643340 643760|643760|643760 TCTTAT 6mer3-8 dme-miR-970-3p X + 643522 643582 3'utr su(s) FlyBase G43736.1 CCGAATCCCCATTATTGTCACTATTTTTTTCGCTAGGTGTAAGGATCTTATTAGCTATACG 8 643570 0.985374383 6 7 59 1 1.079181246 0.25 0.375 0.583333333 8 0 0 12 X:643522-643582 6 5.5 4473 FBgn0003575 432.3133333 10.81666667 16.53666667 0.012722254 0.508474576 0.332594235 -5 -3 -4 0.15 dme-miR-79-3p 8mer-A1 TAGCTTTA X 649248 649255 - X_649248_649255_- 0.624008343 0.624171408 0.624089875 0.000115329 Hmt4-20 FBtr0070151|FBtr0308652 648481|648889 650049|650049 X - 649224 649267 5'utr Hmt4-20 FlyBase G63878.1 CGAAACCCAACTTAGCTTTACACCAAGCAAGCCCCTCTGTTTGT 14 649256 0.954141693 2 12 55 0.888888889 1.204119983 0.166666667 0.214285714 0.388888889 14 2 0 16 X:649224-649267 8 Hmt4-20 FBtr0308652|FBtr0070151 648889|648481 650049|650049 TAGCTTTA 8mer-A1 dme-miR-79-3p X - 649206 649281 5'utr Hmt4-20 FlyBase G48150.1 AGACGCCTTGCATCCGAAACCCAACTTAGCTTTACACCAAGCAAGCCCCTCTGTTTGTTGCAAGATAATGAAACAA 8 649256 0.981180479 3 6 44 0.818181818 0.653212514 0.181818182 0.375 0.545454545 8 1 1 9 X:649206-649281 8 8.5 4474 FBgn0025639 495.87 9.743333333 14.96 0.01714159 0.872391379 0.568181818 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 649666 649671 - X_649666_649671_- 0.999255781 0.99962523 0.999440505 0.000261205 Hmt4-20 FBtr0070151|FBtr0070151|FBtr0070151|FBtr0308652|FBtr0308652|FBtr0308652 648481|648481|648481|648889|648889|648889 650049|650049|650049|650049|650049|650049 X - 649646 649688 5'utr Hmt4-20 FlyBase G63879.1 ATTTCTCTCTTTCTCTTTGTGATCACTTCCCGTTTCTCCCAAC 29 649672 0.728207661 4 25 348 0.909090909 1.176091259 0 0.137931034 0.242424242 29 2 1 30 X:649646-649688 6 Hmt4-20 FBtr0308652|FBtr0308652|FBtr0308652|FBtr0070151|FBtr0070151|FBtr0070151 648889|648889|648889|648481|648481|648481 650049|650049|650049|650049|650049|650049 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 649647 649683 5'utr Hmt4-20 FlyBase G48151.1 TCTCTTTCTCTTTGTGATCACTTCCCGTTTCTCCCAA 8 649672 0.671721366 4 6 95 0.8 0.903089987 0 0.125 0.3 8 2 0 8 X:649647-649683 6 17 4475 FBgn0025639 495.87 9.743333333 14.96 0.034283179 1.744782757 1.136363636 1 1 1 0.15 dme-bantam-3p 7mer-m8 TGATCTC X 650035 650041 - X_650035_650041_- 0.653420163 0.654428198 0.65392418 0.000712764 Hmt4-20 FBtr0070151|FBtr0308652 648481|648889 650049|650049 X - 649885 650065 stop_codon Hmt4-20 FlyBase G63880.2 TCACGGCCAGAAATAACCAACGACTGATCTCCAAGCAAATTGACTAAGCACAGTTGCCATTTCCATGAGAAGAGGAGGAGCGCGTAGGGGGAGAGTACCGGGCGAGGACATGGTGAAGCACCAGGTGCAGAGAAGCAGGAATAACAAGGGATGGAGACTGAGAATGGCTGCGCTGCTGGCG 112 650041 0.931338677 12 102 317 0.947368421 1.799340549 0.07518797 0.151785714 0.285714286 112 6 1 126 X:649885-650065 7 Hmt4-20 FBtr0308652|FBtr0070151 648889|648481 650049|650049 TGATCTC 7mer-m8 dme-bantam-3p X - 649971 650063 stop_codon Hmt4-20 FlyBase G48153.1 ACGGCCAGAAATAACCAACGACTGATCTCCAAGCAAATTGACTAAGCACAGTTGCCATTTCCATGAGAAGAGGAGGAGCGCGTAGGGGGAGAG 78 650041 0.847298196 9 70 228 0.860869565 1.694605199 0.060869565 0.333333333 0.547826087 78 15 1 99 X:649971-650063 7 74 4476 FBgn0025639 495.87 9.743333333 14.96 0.149232662 7.594936709 4.946524064 0 0 0 0.15 dme-miR-2a-2-5p 6mer2-7 GATGAG X 6530957 6530962 - X_6530957_6530962_- 0.990819086 0.999999962 0.995409524 0.006491877 RpL7A FBtr0343329 6530895 6531125 X - 6530933 6530985 3'utr RpL7A FlyBase G65191.1 AAGTGCCTGTGAGAGTGCTTTTGGATGAGTCGATGATTTGGCGTCGGCTTGGA 8 6530966 0.987310221 5 7 56 0.888888889 0.903089987 0.222222222 0.125 0.222222222 8 1 0 8 X:6530933-6530985 6 RpL7A FBtr0343329 6530895 6531125 GATGAG 6mer2-7 dme-miR-2a-2-5p X - 6530924 6530985 3'utr RpL7A FlyBase G49115.1 AAGTGCCTGTGAGAGTGCTTTTGGATGAGTCGATGATTTGGCGTCGGCTTGGATTCAATAAA 11 6530965 0.657050249 8 11 83 1 1.176091259 0.2 0.363636364 0.533333333 11 0 0 15 X:6530924-6530985 6 7.5 4477 FBgn0014026 13933.55333 1778.546667 2702.97 0.000538269 0.004216926 0.002774726 4 3 3.5 0.15 dme-miR-1006-3p 6mer2-7 GAATTT X 6531042 6531047 - X_6531042_6531047_- 0.882925493 0.878411001 0.880668247 0.003192234 RpL7A FBtr0343329 6530895 6531125 X - 6531015 6531299 stop_codon RpL7A FlyBase G65192.1 AACGACAAGGCCAACTTCGGCAAGGTCCTGGAGGCTGTGAAGACCAACTTCAACGAGCGCCACGAGGAGATCCGTCGCCACTGGGGCGGTGGTATCCTTGGCTCCAAGAGTCTGGCCCGCATCTCTAAGCTGGAGCGCGCCAAGGCACGCGAGCTTGCCCAGAAGCAGGGTTGATTCAATCTGAAGCCGGTCCGGTCCGATGGTGGAGACTTTTAAGTACACATGGATGAAATTAGTTGGGCCATGCTCACTGAATTTGATAACTAATAAACTTTTAAGTGTACA 1612 6531048 0.889814948 50 1575 11302 0.977074236 2.553883027 0.258187773 0.119727047 0.225436681 1612 38 4 1790 X:6531015-6531299 6 RpL7A FBtr0343329 6530895 6531125 GAATTT 6mer2-7 dme-miR-1006-3p X - 6531018 6531233 stop_codon RpL7A FlyBase G49116.1 GAGATCCGTCGCCACTGGGGCGGTGGTATCCTTGGCTCCAAGAGTCTGGCCCGCATCTCTAAGCTGGAGCGCGCCAAGGCACGCGAGCTTGCCCAGAAGCAGGGTTGATTCAATCTGAAGCCGGTCCGGTCCGATGGTGGAGACTTTTAAGTACACATGGATGAAATTAGTTGGGCCATGCTCACTGAATTTGATAACTAATAAACTTTTAAGTGT 649 6531048 0.837341731 40 635 4891 0.980827447 2.51054501 0.27346115 0.363636364 0.583249243 649 17 2 972 X:6531018-6531233 6 761.5 4478 FBgn0014026 13933.55333 1778.546667 2702.97 0.054652247 0.428158571 0.281727137 1 1 1 0.15 dme-miR-7-5p 7mer-A1 TCTTCCA X 6537461 6537467 + X_6537461_6537467_+ 0.823308821 0.823338577 0.823323699 2.11E-05 dx FBtr0070914 6537377 6538575 X + 6537437 6537546 3'utr dx FlyBase G59218.1 CCACCGAAGTCCCCTCGATCATTCTCTTCCATTCGTCGTTAAGTTACTTTCTACATAATCTCAGTGTGTGTGCAATCCTCGTTTACTATGATATATTTTTTTTATAGATA 147 6537458 0.79244303 21 133 1425 0.901734104 1.716003344 0.248554913 0.136054422 0.265895954 147 15 2 156 X:6537437-6537546 7 dx FBtr0070914 6537377 6538575 TCTTCCA 7mer-A1 dme-miR-7-5p X + 6537441 6537534 3'utr dx FlyBase G44802.1 CGAAGTCCCCTCGATCATTCTCTTCCATTCGTCGTTAAGTTACTTTCTACATAATCTCAGTGTGTGTGCAATCCTCGTTTACTATGATATATTT 52 6537458 0.765246965 11 44 499 0.864864865 1.204119983 0.135135135 0.307692308 0.513513514 52 7 3 64 X:6537441-6537534 7 43.5 4479 FBgn0000524 299.9366667 9.43 14.42 0.145030618 4.612937434 3.016643551 3 3 3 0.15 dme-miR-79-3p 6mer3-8 TAGCTT X 6537608 6537613 + X_6537608_6537613_+ 0.673414831 0.864743578 0.769079204 0.135289892 dx FBtr0070914 6537377 6538575 X + 6537583 6537635 3'utr dx FlyBase G59219.1 CAACAGCAAACCACAATTGCAATTGTAGCTTCCTTTCCGCTCTTCCAATTCGT 22 6537601 0.983738085 9 22 171 1 1.447158031 0 0.272727273 0.428571429 22 0 0 28 X:6537583-6537635 6 dx FBtr0070914 6537377 6538575 TAGCTT 6mer3-8 dme-miR-79-3p X + 6537588 6537641 3'utr dx FlyBase G44804.1 GCAAACCACAATTGCAATTGTAGCTTCCTTTCCGCTCTTCCAATTCGTATTTGT 12 6537616 0.942894823 9 11 97 0.95 1.278753601 0 0.583333333 0.75 12 1 0 19 X:6537588-6537641 6 14.5 4480 FBgn0000524 299.9366667 9.43 14.42 0.048343539 1.537645811 1.00554785 7 -8 -0.5 0.15 dme-miR-995-5p 6mer3-8 AATTCG X 6538015 6538020 + X_6538015_6538020_+ 0.652608471 0.495062749 0.57383561 0.111401704 dx FBtr0070914 6537377 6538575 X + 6537954 6538098 3'utr dx FlyBase G59222.1 CTTTATATCGGATTTATATAGGATTAAAATAGTATTTTGAGAGAGGAAATGGAGATGGGTAAATTCGATAGACTTGTCTCACTTGTCTTGGCCATTTAATCTCTTTCATTCAGCGAATTTGATGTGATTTTAATTTGAATTATTC 231 6538022 0.988029273 25 226 2057 0.985663082 2.138302698 0.064516129 0.16017316 0.304659498 231 3 1 275 X:6537954-6538098 6 dx FBtr0070914 6537377 6538575 AATTCG 6mer3-8 dme-miR-995-5p X + 6538001 6538149 3'utr dx FlyBase G44807.2 AATGGAGATGGGTAAATTCGATAGACTTGTCTCACTTGTCTTGGCCATTTAATCTCTTTCATTCAGCGAATTTGATGTGATTTTAATTTGAATTATTCATTATTAAACGGAGCATTTAGGAAGCATAGTTGTAACGCAGCCAGATATTC 145 6538022 0.989176125 20 138 1336 0.958715596 2.320146286 0.02293578 0.344827586 0.564220183 145 9 0 209 X:6538001-6538149 6 72.5 4481 FBgn0000524 299.9366667 9.43 14.42 0.241717696 7.688229056 5.027739251 -7 -7 -7 0.15 dme-miR-308-3p 7mer-m1 TGTGATT X 6538076 6538082 + X_6538076_6538082_+ 0.44280413 0.443127098 0.442965614 0.000228395 dx FBtr0070914 6537377 6538575 X + 6537954 6538098 3'utr dx FlyBase G59222.1 CTTTATATCGGATTTATATAGGATTAAAATAGTATTTTGAGAGAGGAAATGGAGATGGGTAAATTCGATAGACTTGTCTCACTTGTCTTGGCCATTTAATCTCTTTCATTCAGCGAATTTGATGTGATTTTAATTTGAATTATTC 231 6538072 0.988029273 25 226 2057 0.985663082 2.138302698 0.064516129 0.16017316 0.304659498 231 3 1 275 X:6537954-6538098 7 dx FBtr0070914 6537377 6538575 TGTGATT 7mer-m1 dme-miR-308-3p X + 6538001 6538149 3'utr dx FlyBase G44807.2 AATGGAGATGGGTAAATTCGATAGACTTGTCTCACTTGTCTTGGCCATTTAATCTCTTTCATTCAGCGAATTTGATGTGATTTTAATTTGAATTATTCATTATTAAACGGAGCATTTAGGAAGCATAGTTGTAACGCAGCCAGATATTC 145 6538072 0.989176125 20 138 1336 0.958715596 2.320146286 0.02293578 0.344827586 0.564220183 145 9 0 209 X:6538001-6538149 7 96 4482 FBgn0000524 299.9366667 9.43 14.42 0.32006757 10.18027572 6.65742025 4 4 4 0.15 dme-miR-283-5p 6mer3-8 TGATAT X 6538288 6538293 + X_6538288_6538293_+ 0.948520313 0.940921657 0.944720985 0.005373022 dx FBtr0070914 6537377 6538575 X + 6538262 6538400 3'utr dx FlyBase G59224.1 CATTTGATGAATTGTTGCTTTCATATTGATATCATCGAGCATCGAACGAACTATCGTATACATCGCCAATATATAGCATATATAGCATATAGTATGTAGAGATCGTACGGACAGCTAGCGGCTACTGACCGCGCCACCA 457 6538287 0.930153984 18 439 3774 0.96 2.225309282 0.352380952 0.115973742 0.23047619 457 19 2 504 X:6538262-6538400 6 dx FBtr0070914 6537377 6538575 TGATAT 6mer3-8 dme-miR-283-5p X + 6538267 6538400 3'utr dx FlyBase G44808.1 GATGAATTGTTGCTTTCATATTGATATCATCGAGCATCGAACGAACTATCGTATACATCGCCAATATATAGCATATATAGCATATAGTATGTAGAGATCGTACGGACAGCTAGCGGCTACTGACCGCGCCACCA 197 6538287 0.985927204 15 187 1569 0.965034965 2.139879086 0.395104895 0.324873096 0.534965035 197 9 1 276 X:6538267-6538400 6 226 4483 FBgn0000524 299.9366667 9.43 14.42 0.753492404 23.96606575 15.67267684 1 1 1 0.15 dme-miR-1006-3p 6mer3-8 CGAATT X 657654 657659 + X_657654_657659_+ 0.420384808 0.38057767 0.400481239 0.02814787 SkpA FBtr0345314|FBtr0070128|FBtr0100530|FBtr0070123|FBtr0070126|FBtr0070124|FBtr0070129|FBtr0070125|FBtr0070127 657597|657597|657597|657597|657597|657597|657597|657597|657597 657899|657899|657899|657899|657899|657899|657899|657899|657899 X + 657599 657692 3'utr SkpA FlyBase G57833.1 AGCGCGGCATTTCGCGGGACCAACATTAAGTTGAAACAGCTAGGGGATTCGGGAACGAATTGGATTTGCAGCATTGCAACTTTACTTAGTTGCT 41 657664 0.920897694 15 40 262 1 1.653212514 0.111111111 0.073170732 0.155555556 41 0 0 45 X:657599-657692 6 SkpA FBtr0070126|FBtr0070129|FBtr0070124|FBtr0070125|FBtr0070127|FBtr0345314|FBtr0070128|FBtr0100530|FBtr0070123 657597|657597|657597|657597|657597|657597|657597|657597|657597 657899|657899|657899|657899|657899|657899|657899|657899|657899 CGAATT 6mer3-8 dme-miR-1006-3p X + 657618 657693 3'utr SkpA FlyBase G43751.1 CCAACATTAAGTTGAAACAGCTAGGGGATTCGGGAACGAATTGGATTTGCAGCATTGCAACTTTACTTAGTTGCTA 49 657663 0.860976914 14 47 316 0.955882353 1.511883361 0.102941176 0.285714286 0.485294118 49 2 1 65 X:657618-657693 6 37 4484 FBgn0025637 1511.546667 228.32 348.46 0.024478239 0.162053259 0.106181484 -10 -9 -9.5 0.15 dme-bantam-3p 6mer3-8 TGATCT X 657757 657762 + X_657757_657762_+ 0.999119822 0.999352138 0.99923598 0.000164261 SkpA FBtr0345314|FBtr0070128|FBtr0100530|FBtr0070123|FBtr0070126|FBtr0070124|FBtr0070129|FBtr0070125|FBtr0070127 657597|657597|657597|657597|657597|657597|657597|657597|657597 657899|657899|657899|657899|657899|657899|657899|657899|657899 X + 657709 657782 3'utr SkpA FlyBase G57834.1 TTTTTTATTTTTAACCCCAGCAGAGACTCGATTTAAATTGTGTATAAATGATCTGTTGCTGATTTGATTCGCGG 24 657746 0.881938661 8 23 225 0.923076923 0.903089987 0.307692308 0.083333333 0.153846154 24 0 2 24 X:657709-657782 6 SkpA FBtr0070126|FBtr0070129|FBtr0070124|FBtr0070125|FBtr0070127|FBtr0345314|FBtr0070128|FBtr0100530|FBtr0070123 657597|657597|657597|657597|657597|657597|657597|657597|657597 657899|657899|657899|657899|657899|657899|657899|657899|657899 TGATCT 6mer3-8 dme-bantam-3p X + 657719 657785 3'utr SkpA FlyBase G43752.1 TTAACCCCAGCAGAGACTCGATTTAAATTGTGTATAAATGATCTGTTGCTGATTTGATTCGCGGGGT 21 657746 0.986149737 8 20 170 0.967741935 1.477121255 0.225806452 0.285714286 0.516129032 21 1 0 30 X:657719-657785 6 17 4485 FBgn0025637 1511.546667 228.32 348.46 0.011246758 0.074456903 0.048786087 11 11 11 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC X 6596122 6596128 + X_6596122_6596128_+ 0.62576617 0.431936348 0.528851259 0.137058437 Pat1 FBtr0331600|FBtr0070945|FBtr0331599 6595666|6595666|6595666 6596954|6596954|6596630 X + 6596053 6596273 3'utr Pat1 FlyBase G59243.1 AGTTATAACCGAACTACTATACGTATTACATCGTAACGAGAGTGTGGGTCAGCTCAGCAAATTTTTCACTGTGTTCCAGTCATCATCGAATACGTCCAGTACCCCTAGTTCCCGAAGTTTTCAAGGATGCCAAGTCCAGTTTTTTCAGTCAGATAGACCTAGGCTAAGATGTAGTAGTATTGTTGGAGCTTCGGTTAACCGCTTAATCGGGAGATCGTTGA 175 6596151 0.986930285 28 139 1205 0.810945274 1.133006358 0.199004975 0.12 0.233830846 175 27 11 163 X:6596053-6596273 7 Pat1 FBtr0331600|FBtr0070945|FBtr0331599 6595666|6595666|6595666 6596954|6596954|6596630 TGTGTTC 7mer-m8 dme-miR-317-3p X + 6596059 6596184 3'utr Pat1 FlyBase G44824.1 AACCGAACTACTATACGTATTACATCGTAACGAGAGTGTGGGTCAGCTCAGCAAATTTTTCACTGTGTTCCAGTCATCATCGAATACGTCCAGTACCCCTAGTTCCCGAAGTTTTCAAGGATGCCA 89 6596151 0.985205568 16 68 561 0.780487805 0.982271233 0.300813008 0.303370787 0.495934959 89 18 9 96 X:6596059-6596184 7 45 4486 FBgn0029878 899.4033333 29.25 44.72333333 0.05003317 1.538461538 1.006186182 -29 -29 -29 0.15 dme-miR-92b-3p 6mer3-8 GTGCAA X 6596532 6596537 + X_6596532_6596537_+ 0.999930573 0.99925082 0.999590697 0.000480691 Pat1 FBtr0331600|FBtr0070945|FBtr0331599 6595666|6595666|6595666 6596954|6596954|6596630 X + 6596512 6596555 3'utr Pat1 FlyBase G59246.1 AAGATTTAAAGTTGTATAGAGTGCAAGAAGTATGCCCATTGTAT 5 6596528 0.973416598 2 5 32 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 X:6596512-6596555 6 Pat1 FBtr0331600|FBtr0070945|FBtr0331599 6595666|6595666|6595666 6596954|6596954|6596630 GTGCAA 6mer3-8 dme-miR-92b-3p X + 6596512 6596565 3'utr Pat1 FlyBase G44827.1 AAGATTTAAAGTTGTATAGAGTGCAAGAAGTATGCCCATTGTATAGTCTAAGTC 9 6596544 0.981941051 4 7 54 0.916666667 1.041392685 0.25 0.333333333 0.5 9 1 0 11 X:6596512-6596565 6 5 4487 FBgn0029878 899.4033333 29.25 44.72333333 0.005559241 0.170940171 0.111798465 4 -12 -4 0.15 dme-miR-932-5p 7mer-m8 GGAATTG X 6650575 6650581 + X_6650575_6650581_+ 0.702925095 0.702948891 0.702936993 1.68E-05 pigs FBtr0308653|FBtr0343375|FBtr0070948 6650412|6650412|6650412 6653015|6653015|6652098 X + 6650536 6650611 3'utr pigs FlyBase G59272.1 GTGGGTAGTGAATAGTTAAGATAGGATTAGAGCCAAGCTGGAATTGTCTGCTGCTGCTACGGCGTGTGTGTGTGCG 128 6650574 0.936510671 16 99 899 0.787671233 1.583576586 0.226027397 0.1328125 0.239726027 128 29 2 115 X:6650536-6650611 7 pigs FBtr0308653|FBtr0343375|FBtr0070948 6650412|6650412|6650412 6653015|6653015|6652098 GGAATTG 7mer-m8 dme-miR-932-5p X + 6650534 6650600 3'utr pigs FlyBase G44847.1 TTGTGGGTAGTGAATAGTTAAGATAGGATTAGAGCCAAGCTGGAATTGTCTGCTGCTGCTACGGCGT 87 6650574 0.937648929 15 67 573 0.774193548 1.681241237 0.25 0.287356322 0.5 87 27 1 96 X:6650534-6650600 7 58 4488 FBgn0029881 6856.753333 130.81 200.9766667 0.008458814 0.443391178 0.288590715 1 1 1 0.15 dme-miR-8-3p 6mer3-8 CAGTAT X 6651675 6651680 + X_6651675_6651680_+ 0.99297163 0.99327686 0.993124245 0.00021588 pigs FBtr0308653|FBtr0343375|FBtr0070948 6650412|6650412|6650412 6653015|6653015|6652098 X + 6651485 6651697 3'utr pigs FlyBase G59274.1 TACGATCGCAAACACATAGAGGACGCATACCTAGTTTTCTAGAAATTTTTAAAGTAAAGCCAACAAAATTCTTCAGATTCGATTTGTAGCGATGCAGAGAATACGTTTATTTTTGTACGCTTGAACAGAGGAACCGGCGGAGATCGTGGGATCTGGAAAGATGAATAGCTTTTAGACAACTCGACTTTTACAGTATAGCTCTATATATATATG 77 6651672 0.983949203 19 74 571 0.97 1.685741739 0.09 0.220779221 0.4 77 2 1 97 X:6651485-6651697 6 pigs FBtr0308653|FBtr0343375|FBtr0070948 6650412|6650412|6650412 6653015|6653015|6652098 CAGTAT 6mer3-8 dme-miR-8-3p X + 6651598 6651701 3'utr pigs FlyBase G44848.1 TGTACGCTTGAACAGAGGAACCGGCGGAGATCGTGGGATCTGGAAAGATGAATAGCTTTTAGACAACTCGACTTTTACAGTATAGCTCTATATATATATGTATA 43 6651672 0.980874827 12 42 303 0.933333333 1.748188027 0.183333333 0.279069767 0.483333333 43 4 0 56 X:6651598-6651701 6 38.5 4489 FBgn0029881 6856.753333 130.81 200.9766667 0.005614902 0.294320006 0.191564527 3 3 3 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 6652316 6652321 + X_6652316_6652321_+ 0.896413009 0.949694536 0.923053773 0.03767571 pigs FBtr0308653|FBtr0343375 6650412|6650412 6653015|6653015 X + 6652220 6652500 3'utr pigs FlyBase G59280.1 TAACTACAACTATTAAACATTTATTGTATGATTTCATTCTTTTTTTTTTTTTTGTTTCTTTAGATTTAGCAATGTTAACATATAGTTTAGTACATCGTACCTATGCATATAAATTACATACATCATATATAGATTGTAAATTGTGTTTGTCCAATTGCCCACATGTTGTATAGTTCTTATGTACTCGTAAAATCGGCCTTAATGTTCAGTCTGTCGATATCTTGTATCAGTTTCATTTTGTATTCTTTTCTTATCATTATAATTTGTATTTTGAATTTAAG 233 6652323 0.988872396 39 222 2101 0.949090909 1.939519253 0.04 0.154506438 0.283636364 233 12 2 261 X:6652220-6652500 6 pigs FBtr0308653|FBtr0343375 6650412|6650412 6653015|6653015 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X + 6652290 6652440 3'utr pigs FlyBase G44853.1 AATGTTAACATATAGTTTAGTACATCGTACCTATGCATATAAATTACATACATCATATATAGATTGTAAATTGTGTTTGTCCAATTGCCCACATGTTGTATAGTTCTTATGTACTCGTAAAATCGGCCTTAATGTTCAGTCTGTCGATATC 159 6652323 0.850347378 26 147 1313 0.946721311 2.36361198 0.032786885 0.402515723 0.610655738 159 13 0 231 X:6652290-6652440 6 154 4490 FBgn0029881 6856.753333 130.81 200.9766667 0.022459609 1.177280024 0.766258106 -7 -7 -7 0.15 dme-miR-2a-2-5p 7mer-m8 TGATGAG X 6652804 6652810 + X_6652804_6652810_+ 0.658985493 0.658999206 0.658992349 9.69E-06 pigs FBtr0308653|FBtr0343375 6650412|6650412 6653015|6653015 X + 6652705 6652813 3'utr pigs FlyBase G59281.1 AGAAAATTAAGCAATTGCCCGATTTGCATGCCAAAAGGTTGATAAGAAATCGAGCAAAAAACAAGATGAAGTGCACCACGGGTTCTCGAGCGCTGGCCATGATGAGCAT 15 6652799 0.969187036 7 12 60 0.8125 1.113943352 0.3125 0.066666667 0.125 15 3 0 13 X:6652705-6652813 7 pigs FBtr0308653|FBtr0343375 6650412|6650412 6653015|6653015 TGATGAG 7mer-m8 dme-miR-2a-2-5p X + 6652767 6652812 3'utr pigs FlyBase G44855.1 AAGATGAAGTGCACCACGGGTTCTCGAGCGCTGGCCATGATGAGCA 7 6652806 0.760593471 5 6 23 0.941176471 1.204119983 0.176470588 0.714285714 0.882352941 7 1 0 16 X:6652767-6652812 7 5 4491 FBgn0029881 6856.753333 130.81 200.9766667 0.000729208 0.038223377 0.02487851 5 -2 1.5 0.15 dme-miR-318-3p 6mer3-8 CCCAGT X 6659215 6659220 + X_6659215_6659220_+ 0.999984357 0.890038024 0.94501119 0.077743845 l(1)G0148 FBtr0343377|FBtr0070950 6659154|6659154 6659709|6659709 X + 6659180 6659242 3'utr l(1)G0148 FlyBase G59291.1 ACATACACCACTTGTACATACATACATATACTATACCCAGTTCGCTGATCATGATTGTACATA 9 6659226 0.985920225 6 9 71 1 1 0.1 0.111111111 0.2 9 0 0 10 X:6659180-6659242 6 l(1)G0148 FBtr0070950|FBtr0343377 6659154|6659154 6659709|6659709 CCCAGT 6mer3-8 dme-miR-318-3p X + 6659182 6659237 3'utr l(1)G0148 FlyBase G44861.1 ATACACCACTTGTACATACATACATATACTATACCCAGTTCGCTGATCATGATTGT 7 6659234 0.984238198 5 7 55 1 1 0.7 0.285714286 0.5 7 0 0 10 X:6659182-6659237 6 6.5 4492 FBgn0028360 627.0766667 25.24 38.74333333 0.010365559 0.257527734 0.167770799 -11 -19 -15 0.15 dme-miR-33-5p 6mer3-8 CAATGC X 6659304 6659309 + X_6659304_6659309_+ 0.999507033 0.542837301 0.771172167 0.322914242 l(1)G0148 FBtr0343377|FBtr0070950 6659154|6659154 6659709|6659709 X + 6659262 6659348 3'utr l(1)G0148 FlyBase G59292.1 AGCATATCTCATTATTGCACCCAGAGCCAGAAGAAACTCGTCCAATGCCCCACTAGGCCACATTTACTTACCTCAAGCCGCAGGCAG 26 6659307 0.949235065 6 23 102 0.875 1.447158031 0.09375 0.192307692 0.34375 26 4 0 28 X:6659262-6659348 6 l(1)G0148 FBtr0070950|FBtr0343377 6659154|6659154 6659709|6659709 CAATGC 6mer3-8 dme-miR-33-5p X + 6659259 6659347 3'utr l(1)G0148 FlyBase G44862.1 AAGAGCATATCTCATTATTGCACCCAGAGCCAGAAGAAACTCGTCCAATGCCCCACTAGGCCACATTTACTTACCTCAAGCCGCAGGCA 12 6659307 0.954349558 5 11 52 0.944444444 1.230448921 0.111111111 0.333333333 0.555555556 12 1 0 17 X:6659259-6659347 6 14 4493 FBgn0028360 627.0766667 25.24 38.74333333 0.022325819 0.554675119 0.361352491 -3 -3 -3 0.15 dme-miR-304-5p 6mer2-7 GAGATT X 6659476 6659481 + X_6659476_6659481_+ 0.812410746 0.954051064 0.883230905 0.100154887 l(1)G0148 FBtr0343377|FBtr0070950 6659154|6659154 6659709|6659709 X + 6659434 6659514 3'utr l(1)G0148 FlyBase G59293.1 ATGAACAAAATGGGCAAGGAATACCAAAAAAGCAAACGAGGAGAGATTGATTATGAAATATTGTGGCCGAAAGGCTACAAA 269 6659480 0.993519929 10 264 796 0.984177215 1.714609139 0.082278481 0.156133829 0.28164557 269 0 5 311 X:6659434-6659514 6 l(1)G0148 FBtr0070950|FBtr0343377 6659154|6659154 6659709|6659709 GAGATT 6mer2-7 dme-miR-304-5p X + 6659439 6659520 3'utr l(1)G0148 FlyBase G44863.1 CAAAATGGGCAAGGAATACCAAAAAAGCAAACGAGGAGAGATTGATTATGAAATATTGTGGCCGAAAGGCTACAAAATGTTG 144 6659480 0.993904911 12 142 409 0.985645933 2.31386722 0.105263158 0.298611111 0.516746411 144 3 0 206 X:6659439-6659520 6 124 4494 FBgn0028360 627.0766667 25.24 38.74333333 0.197742966 4.912836767 3.200550632 -4 -4 -4 0.15 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA X 6667159 6667166 + X_6667159_6667166_+ 0.621824684 0.62114085 0.621482767 0.00048352 Ctr1A FBtr0070951|FBtr0308593|FBtr0308592|FBtr0308594 6667050|6667050|6667050|6667050 6668258|6667628|6667628|6667628 X + 6667112 6667188 3'utr Ctr1A FlyBase G59297.1 GAGGCGTTGGAGGAGCAAATGTCCATCTGAATGAAAGGCAGAGGCATTGGTGCTAAGCTGGGAATCCCAGGAAGCTC 252 6667158 0.949332518 4 249 1079 0.992831541 2.141449773 0.35483871 0.083333333 0.172043011 252 1 1 277 X:6667112-6667188 8 Ctr1A FBtr0308594|FBtr0308592|FBtr0308593|FBtr0070951 6667050|6667050|6667050|6667050 6667628|6667628|6667628|6668258 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" X + 6667138 6667189 3'utr Ctr1A FlyBase G44866.1 CTGAATGAAAGGCAGAGGCATTGGTGCTAAGCTGGGAATCCCAGGAAGCTCT 133 6667158 0.884878544 3 131 561 0.985148515 1.997823081 0.292079208 0.37593985 0.589108911 133 2 1 199 X:6667138-6667189 8 190 4495 FBgn0062413 431.6666667 29.72666667 45.48333333 0.44015444 6.391567616 4.177354342 1 1 1 0.15 dme-miR-283-5p 7mer-A1 GATATTA X 6668129 6668135 + X_6668129_6668135_+ 0.483428784 0.73721878 0.610323782 0.17945663 Ctr1A FBtr0070951 6667050 6668258 X + 6668107 6668167 3'utr Ctr1A FlyBase G59299.1 AAGTGCGTAAATAGATGTTGTAGATATTAAACTTAATGCAAATACATACAGTAAAGCGACA 44 6668124 0.989322577 6 43 415 1 1.69019608 0.306122449 0.113636364 0.204081633 44 0 0 49 X:6668107-6668167 7 Ctr1A FBtr0070951 6667050 6668258 GATATTA 7mer-A1 dme-miR-283-5p X + 6668115 6668146 3'utr Ctr1A FlyBase G44867.1 AAATAGATGTTGTAGATATTAAACTTAATGCA 13 6668124 0.733310588 5 13 121 1 1.301029996 0.15 0.230769231 0.5 13 0 0 20 X:6668115-6668146 7 27.5 4496 FBgn0062413 431.6666667 29.72666667 45.48333333 0.063706564 0.925095313 0.604617076 5 5 5 0.15 dme-miR-7-5p 6mer2-7 TCTTCC X 6668833 6668838 - X_6668833_6668838_- 0.879454507 0.869136388 0.874295447 0.007295998 CG3198 FBtr0070991 6668537 6671982 X - 6668821 6668861 3'utr CG3198 FlyBase G65212.1 CCTTTTCCTGCGAGGAACACACCTCTTCCCTGCCAGCATCC 9 6668836 0.774177435 2 9 67 1 1 0 0.111111111 0.2 9 0 0 10 X:6668821-6668861 6 CG3198 FBtr0070991 6668537 6671982 TCTTCC 6mer2-7 dme-miR-7-5p X - 6668812 6668861 3'utr CG3198 FlyBase G49129.1 CCTTTTCCTGCGAGGAACACACCTCTTCCCTGCCAGCATCCCAGATCCCA 9 6668836 0.98686808 3 7 52 0.785714286 1.041392685 0 0.333333333 0.571428571 9 3 0 11 X:6668812-6668861 6 7.5 4497 FBgn0029887 782.61 18.86666667 28.88333333 0.009583317 0.397526502 0.25966532 -2 -2 -2 0.15 dme-miR-11-3p 7mer-m1 TGTGATG X 6669798 6669804 - X_6669798_6669804_- 0.611739887 0.610373234 0.611056561 0.000966403 CG3198 FBtr0070991 6668537 6671982 X - 6669789 6669918 3'utr CG3198 FlyBase G65217.2 ATGTATGTTCATGTTCCCCCCTCCTCTTCACCAACAGGTAAATTGCGACTGAACCCGACCCCATAAAAATTATGATACTGATATTTGATATCGATCTCGATTAAATCGAATTTTTGTGATGTGACGAGAT 54 6669805 0.971146207 19 49 371 0.933333333 1.146128036 0.15 0.111111111 0.2 54 1 3 56 X:6669789-6669918 7 CG3198 FBtr0070991 6668537 6671982 TGTGATG 7mer-m1 dme-miR-11-3p X - 6669789 6669914 3'utr CG3198 FlyBase G49132.1 ATGTTCATGTTCCCCCCTCCTCTTCACCAACAGGTAAATTGCGACTGAACCCGACCCCATAAAAATTATGATACTGATATTTGATATCGATCTCGATTAAATCGAATTTTTGTGATGTGACGAGAT 33 6669806 0.80084011 14 32 231 0.941176471 1.079181246 0.176470588 0.393939394 0.607843137 33 0 3 48 X:6669789-6669914 7 19.5 4498 FBgn0029887 782.61 18.86666667 28.88333333 0.024916625 1.033568905 0.675129833 1 2 1.5 0.15 dme-miR-980-3p 7mer-A1 GCAGCTA X 6689439 6689445 - X_6689439_6689445_- 0.806220554 0.805661847 0.805941201 0.000395131 CG14442 FBtr0070988|FBtr0339493|FBtr0300772|FBtr0339491 6689294|6689318|6689318|6689318 6689803|6689803|6689803|6689803 X - 6689341 6689497 3'utr CG14442 FlyBase G65234.1 AAATGAAATGAAACACTGTGACGCCCCGAAAGCCACTGAAAATCGAAGAAATGCAGCTAAAATAAAAAGATAACTACGATCGATGGTGGAGATCCAACTAAACCTAATCCAGAATATGTAGCGCGTAAACAGAGCACTAAGTAGTTGTATGTATTAA 95 6689446 0.956170855 14 93 311 0.983193277 1.591064607 0.201680672 0.189473684 0.352941176 95 0 2 117 X:6689341-6689497 7 CG14442 FBtr0339491|FBtr0300772|FBtr0339493|FBtr0070988 6689318|6689318|6689318|6689294 6689803|6689803|6689803|6689803 GCAGCTA 7mer-A1 dme-miR-980-3p X - 6689390 6689484 3'utr CG14442 FlyBase G49142.1 CACTGTGACGCCCCGAAAGCCACTGAAAATCGAAGAAATGCAGCTAAAATAAAAAGATAACTACGATCGATGGTGGAGATCCAACTAAACCTAAT 62 6689446 0.957393786 8 62 187 1 1.886490725 0.168831169 0.209677419 0.363636364 62 0 0 77 X:6689390-6689484 7 50 4499 FBgn0029893 971.2033333 28.72 44.23333333 0.051482525 1.740947075 1.130369254 1 1 1 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 6696116 6696122 - X_6696116_6696122_- 0.65129881 0.652824558 0.652061684 0.001078904 CG14440 FBtr0070987 6695864 6697328 X - 6696088 6696143 3'utr CG14440 FlyBase G65246.1 AATAAAGTGTAACCATTAAGTTCTAGTCGAAATTTCAAATTGTTTTTCTCCTGTCT 34 6696123 0.981979081 3 34 259 1 1.568201724 0.135135135 0.088235294 0.162162162 34 0 0 37 X:6696088-6696143 7 CG14440 FBtr0070987 6695864 6697328 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X - 6696108 6696143 3'utr CG14440 FlyBase G49150.1 AATAAAGTGTAACCATTAAGTTCTAGTCGAAATTTC 14 6696123 0.719570925 2 13 101 0.727272727 1.204119983 0 0.285714286 0.545454545 14 6 0 16 X:6696108-6696143 7 23.5 4500 FBgn0029894 265.63 13.82333333 21.15 0.088468923 1.700024114 1.111111111 1 1 1 0.15 dme-miR-980-3p 6mer3-8 GGCAGC X 6697074 6697079 - X_6697074_6697079_- 0.998634249 0.999058825 0.998846537 0.000300238 CG14440 FBtr0070987|FBtr0310419 6695864|6696764 6697328|6697328 X - 6697041 6697099 3'utr CG14440 FlyBase G65249.1 TGAGGACTTGCAAATGAATGGGCAGCAGGCACTCTAGGATTAAAGCCAGGCAATTTTTT 24 6697081 0.959687632 6 21 102 0.866666667 1.113943352 0.233333333 0.25 0.4 24 3 1 26 X:6697041-6697099 6 CG14440 FBtr0310419|FBtr0070987 6696764|6695864 6697328|6697328 GGCAGC 6mer3-8 dme-miR-980-3p X - 6697054 6697099 3'utr CG14440 FlyBase G49152.1 TGAGGACTTGCAAATGAATGGGCAGCAGGCACTCTAGGATTAAAGC 10 6697082 0.868282228 2 10 36 1 1.113943352 0.307692308 0.2 0.384615385 10 0 0 13 X:6697054-6697099 6 15 4501 FBgn0029894 265.63 13.82333333 21.15 0.056469525 1.085121775 0.709219858 2 3 2.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC X 6721473 6721478 - X_6721473_6721478_- 0.999745631 0.999921733 0.999833682 0.000124522 CG3168 FBtr0340265|FBtr0070984|FBtr0340267|FBtr0340266|FBtr0070986|FBtr0070985|FBtr0340268 6720473|6720473|6720473|6720473|6720473|6720473|6720002 6721551|6721551|6721551|6721551|6721551|6721551|6721551 X - 6721452 6721502 3'utr CG3168 FlyBase G65255.1 CCATAGAATCTTCTGCTTTAACTGCTAGTCTGCAAGGTCTTGTTTCGAGTC 11 6721488 0.742662216 5 9 95 0.8125 1.113943352 0.125 0.454545455 0.625 11 3 0 13 X:6721452-6721502 6 CG3168 FBtr0070985|FBtr0340268|FBtr0340266|FBtr0070986|FBtr0340267|FBtr0340265|FBtr0070984 6720473|6720002|6720473|6720473|6720473|6720473|6720473 6721551|6721551|6721551|6721551|6721551|6721551|6721551 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" X - 6721441 6721488 3'utr CG3168 FlyBase G49156.1 GCTTTAACTGCTAGTCTGCAAGGTCTTGTTTCGAGTCATGATACTATG 6 6721472 0.985759735 3 4 41 1 0.954242509 0.666666667 0.5 0.666666667 6 0 0 9 X:6721441-6721488 6 6 4502 FBgn0029896 793.0366667 27.79 42.01333333 0.007565854 0.215905002 0.142811806 10 -6 2 0.15 dme-miR-317-3p 6mer3-8 TGTGTT X 6780948 6780953 - X_6780948_6780953_- 0.926075566 0.997155441 0.961615503 0.050261009 C3G FBtr0340087|FBtr0299791 6780788|6780788 6782353|6782353 X - 6780913 6780990 3'utr C3G FlyBase G65272.1 TTTTTGCTGCTGCTTCCGCTGCCGCTGGCGCATCAATTGTGTTTACTAAGCTAACGAACCTAGGGACAACAATTTATT 14 6780954 0.986268894 6 14 122 1 1.230448921 0.176470588 0.214285714 0.352941176 14 0 0 17 X:6780913-6780990 6 C3G FBtr0299791|FBtr0340087 6780788|6780788 6782353|6782353 TGTGTT 6mer3-8 dme-miR-317-3p X - 6780944 6780986 3'utr C3G FlyBase G49168.1 TGCTGCTGCTTCCGCTGCCGCTGGCGCATCAATTGTGTTTACT 9 6780954 0.984394933 4 9 69 1 1.176091259 0.266666667 0.333333333 0.6 9 0 0 15 X:6780944-6780986 6 8.5 4503 FBgn0259228 1638.55 32.65333333 50.12 0.005187513 0.260310331 0.169592977 1 1 1 0.15 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA X 6781079 6781086 - X_6781079_6781086_- 0.606804342 0.617843361 0.612323851 0.007805822 C3G FBtr0340087|FBtr0299791 6780788|6780788 6782353|6782353 X - 6781048 6781108 3'utr C3G FlyBase G65273.1 AACAGAAAAAAAGGCTGCTTACTTGAAGAATTTAATTCCCGATCACCATAGCCATTTTAAT 11 6781090 0.953142618 4 11 55 1 1.176091259 0.066666667 0.363636364 0.533333333 11 0 0 15 X:6781048-6781108 8 C3G FBtr0299791|FBtr0340087 6780788|6780788 6782353|6782353 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p X - 6781064 6781107 3'utr C3G FlyBase G49169.1 ACAGAAAAAAAGGCTGCTTACTTGAAGAATTTAATTCCCGATCA 9 6781089 0.943563448 3 9 38 1 1.176091259 0 0.333333333 0.6 9 0 0 15 X:6781064-6781107 8 9 4504 FBgn0259228 1638.55 32.65333333 50.12 0.005492661 0.275622703 0.179569034 4 3 3.5 0.15 dme-miR-1012-3p 6mer3-8 TTGACT X 6781281 6781286 - X_6781281_6781286_- 0.503572786 0.311292521 0.407432654 0.135962704 C3G FBtr0340087|FBtr0299791 6780788|6780788 6782353|6782353 X - 6781197 6781308 3'utr C3G FlyBase G65275.1 AATAATAGTTCTAAATAACGCTTTGACTTCTCCTTTCAATTCTGTGAGGAATAAATTTATTGATATTGCGTGTAAAAATATTAATCATGAGAAGAAATCTGAAAGCAGAGTT 47 6781286 0.898980112 11 47 405 1 1.755874856 0.087719298 0.212765957 0.350877193 47 0 0 57 X:6781197-6781308 6 C3G FBtr0299791|FBtr0340087 6780788|6780788 6782353|6782353 TTGACT 6mer3-8 dme-miR-1012-3p X - 6781257 6781312 3'utr C3G FlyBase G49170.1 ATGTAATAATAGTTCTAAATAACGCTTTGACTTCTCCTTTCAATTCTGTGAGGAAT 21 6781286 0.733428383 6 17 228 0.75862069 0.740362689 0.379310345 0.285714286 0.482758621 21 4 3 22 X:6781257-6781312 6 27.5 4505 FBgn0259228 1638.55 32.65333333 50.12 0.016783131 0.842180482 0.54868316 0 0 0 0.15 dme-miR-304-5p 6mer3-8 TGAGAT X 6781828 6781833 - X_6781828_6781833_- 0.565175506 0.570473826 0.567824666 0.003746464 C3G FBtr0300526|FBtr0334967|FBtr0299794|FBtr0299793|FBtr0334968|FBtr0340087|FBtr0299791|FBtr0299795|FBtr0299792|FBtr0334969 6781414|6781414|6781414|6781414|6781414|6780788|6780788|6781414|6781414|6781414 6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353 X - 6781806 6781858 3'utr C3G FlyBase G65276.1 AAATCAGCAATTTTCGCTTTTGTTTTGAGATCTCTTTTTTACACAAGAACACA 26 6781824 0.979570102 9 24 340 0.931034483 1.431363764 0.413793103 0.115384615 0.206896552 26 2 0 27 X:6781806-6781858 6 C3G FBtr0299792|FBtr0334969|FBtr0299791|FBtr0299795|FBtr0334968|FBtr0340087|FBtr0300526|FBtr0334967|FBtr0299794|FBtr0299793 6781414|6781414|6780788|6781414|6781414|6780788|6781414|6781414|6781414|6781414 6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353 TGAGAT 6mer3-8 dme-miR-304-5p X - 6781815 6781847 3'utr C3G FlyBase G49172.1 TTTCGCTTTTGTTTTGAGATCTCTTTTTTACAC 22 6781823 0.624662568 9 21 307 0.972222222 1.544068044 0.583333333 0.409090909 0.638888889 22 1 0 35 X:6781815-6781847 6 22 4506 FBgn0259228 1638.55 32.65333333 50.12 0.013426505 0.673744385 0.438946528 -9 -10 -9.5 0.15 dme-miR-278-3p 6mer3-8 CCCACC X 6781977 6781982 - X_6781977_6781982_- 0.923043709 0.587966129 0.755504919 0.236935643 C3G FBtr0300526|FBtr0334967|FBtr0299794|FBtr0299793|FBtr0334968|FBtr0340087|FBtr0299791|FBtr0299795|FBtr0299792|FBtr0334969 6781414|6781414|6781414|6781414|6781414|6780788|6780788|6781414|6781414|6781414 6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353 X - 6781952 6782013 3'utr C3G FlyBase G65277.1 TTGGGTCGATGGACCTAACCTCAGCTAACTCCCCACCAATATTCGAATCCGAATCCCTGTCT 6 6781984 0.972909422 6 6 35 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 X:6781952-6782013 6 C3G FBtr0299792|FBtr0334969|FBtr0299791|FBtr0299795|FBtr0334968|FBtr0340087|FBtr0300526|FBtr0334967|FBtr0299794|FBtr0299793 6781414|6781414|6780788|6781414|6781414|6780788|6781414|6781414|6781414|6781414 6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353 CCCACC 6mer3-8 dme-miR-278-3p X - 6781977 6782028 3'utr C3G FlyBase G49173.1 AAGCTCTATGAGTCATTGGGTCGATGGACCTAACCTCAGCTAACTCCCCACC 10 6782012 0.978077675 4 8 57 0.923076923 1.079181246 0.153846154 0.3 0.461538462 10 1 0 12 X:6781977-6782028 5 2.5 4507 FBgn0259228 1638.55 32.65333333 50.12 0.001525739 0.076561862 0.049880287 2 30 16 0.15 dme-miR-190-5p 6mer3-8 ACATAT X 6812161 6812166 + X_6812161_6812166_+ 1 0.999999998 0.999999999 0 pod1 FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228|FBtr0112956|FBtr0070964|FBtr0070966 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813830|6813830|6813830|6813830|6813520|6813830|6813830 X + 6812103 6812165 3'utr pod1 FlyBase G59407.1 TCAGTTTATGTGGCCATATAGGAAAAGTGAGGAGAAGGACTTAGATGATACTGCTTTTACATA 8 6812159 0.93192631 7 7 60 0.888888889 0.903089987 0 0.125 0.222222222 8 1 0 8 X:6812103-6812165 5 pod1 FBtr0112956|FBtr0070964|FBtr0070966|FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813520|6813830|6813830|6813830|6813830|6813830|6813830 ACATAT 6mer3-8 dme-miR-190-5p X + 6812107 6812191 3'utr pod1 FlyBase G44936.1 TTTATGTGGCCATATAGGAAAAGTGAGGAGAAGGACTTAGATGATACTGCTTTTACATATACGCAAAATGTATTTCCCTCTCTGT 8 6812144 0.984837052 8 8 65 1 1.041392685 0 0.375 0.545454545 8 0 0 11 X:6812107-6812191 6 2.5 4508 FBgn0029903 1544.65 31.03666667 47.70666667 0.00161849 0.080549887 0.052403577 2 17 9.5 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 6812373 6812379 + X_6812373_6812379_+ 0.661615493 0.661615497 0.661615495 0 pod1 FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228|FBtr0112956|FBtr0070964|FBtr0070966 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813830|6813830|6813830|6813830|6813520|6813830|6813830 X + 6812358 6812404 3'utr pod1 FlyBase G59409.2 ACCCCCACCATTGTTTCTAGTCTTTCGCATCGTTCGATCCCCCAAAT 90 6812380 0.790910513 10 61 825 0.673267327 1.230448921 0.108910891 0.122222222 0.217821782 90 30 3 68 X:6812358-6812404 7 pod1 FBtr0112956|FBtr0070964|FBtr0070966|FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813520|6813830|6813830|6813830|6813830|6813830|6813830 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X + 6812359 6812403 3'utr pod1 FlyBase G44937.2 CCCCCACCATTGTTTCTAGTCTTTCGCATCGTTCGATCCCCCAAA 91 6812380 0.630473063 8 45 765 0.510948905 0.942008053 0.03649635 0.395604396 0.598540146 91 60 7 70 X:6812359-6812403 7 82.5 4509 FBgn0029903 1544.65 31.03666667 47.70666667 0.053410158 2.658146279 1.729318055 -7 -7 -7 0.15 dme-miR-14-3p 6mer2-7 AGACTG X 6812467 6812472 + X_6812467_6812472_+ 0.999972636 0.999981095 0.999976865 6.01E-06 pod1 FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228|FBtr0112956|FBtr0070964|FBtr0070966 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813830|6813830|6813830|6813830|6813520|6813830|6813830 X + 6812446 6812488 3'utr pod1 FlyBase G59410.1 AGACAGGAAACAAAAACATATAGACTGTAGCCAAACGAAAAAT 99 6812466 0.900310695 3 98 295 0.991869919 1.785329835 0.097560976 0.222222222 0.37398374 99 0 1 122 X:6812446-6812488 6 pod1 FBtr0112956|FBtr0070964|FBtr0070966|FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813520|6813830|6813830|6813830|6813830|6813830|6813830 AGACTG 6mer2-7 dme-miR-14-3p X + 6812450 6812488 3'utr pod1 FlyBase G44938.1 AGGAAACAAAAACATATAGACTGTAGCCAAACGAAAAAT 71 6812466 0.889506262 3 69 215 0.979166667 1.496006599 0.104166667 0.253521127 0.447916667 71 0 2 94 X:6812450-6812488 6 84.5 4510 FBgn0029903 1544.65 31.03666667 47.70666667 0.054704949 2.722586188 1.771240917 1 1 1 0.15 dme-bantam-3p 6mer2-7 GATCTC X 6813304 6813309 + X_6813304_6813309_+ 0.975159723 0.726157444 0.850658583 0.176071215 pod1 FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228|FBtr0112956|FBtr0070964|FBtr0070966 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813830|6813830|6813830|6813830|6813520|6813830|6813830 X + 6813190 6813325 3'utr pod1 FlyBase G59413.1 AAACGCCATGGAACGACTGACAGACAAGTATTCGCTAAACATTCTGATCCAAATCTGCCCGGCCCGTCAAAAAGTGTTCCACAGCACGAGTAGAATTGATCTGGGATCGATTGGGATCTCGGGATCGGGGTAGCGG 30 6813286 0.870300535 12 26 139 0.861111111 1.014240439 0.277777778 0.2 0.333333333 30 3 2 31 X:6813190-6813325 6 pod1 FBtr0112956|FBtr0070964|FBtr0070966|FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813520|6813830|6813830|6813830|6813830|6813830|6813830 GATCTC 6mer2-7 dme-bantam-3p X + 6813272 6813319 3'utr pod1 FlyBase G44942.1 AGCACGAGTAGAATTGATCTGGGATCGATTGGGATCTCGGGATCGGGG 7 6813300 0.977940622 4 6 43 0.8 0.903089987 0.7 0.428571429 0.6 7 2 0 8 X:6813272-6813319 6 6.5 4511 FBgn0029903 1544.65 31.03666667 47.70666667 0.004208073 0.209429707 0.136249301 18 4 11 0.15 dme-miR-970-3p 6mer3-8 TCTTAT X 6813451 6813456 + X_6813451_6813456_+ 0.995413113 0.997761761 0.996587437 0.001660782 pod1 FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228|FBtr0112956|FBtr0070964|FBtr0070966 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813830|6813830|6813830|6813830|6813520|6813830|6813830 X + 6813432 6813472 3'utr pod1 FlyBase G59414.1 ATTACGATTTTCGAACGTCTCTTATTTATATTTATATATAT 20 6813453 0.739894318 4 19 217 0.96 1.380211242 0 0.2 0.36 20 1 0 24 X:6813432-6813472 6 pod1 FBtr0112956|FBtr0070964|FBtr0070966|FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813520|6813830|6813830|6813830|6813830|6813830|6813830 TCTTAT 6mer3-8 dme-miR-970-3p X + 6813404 6813470 3'utr pod1 FlyBase G44943.1 GTCATTCTGTATTTATTAGCCATATTCGATTACGATTTTCGAACGTCTCTTATTTATATTTATATAT 18 6813453 0.990403806 6 18 189 1 1.447158031 0.035714286 0.444444444 0.642857143 18 0 0 28 X:6813404-6813470 6 16.5 4512 FBgn0029903 1544.65 31.03666667 47.70666667 0.010682032 0.531629256 0.345863611 -2 -2 -2 0.15 dme-miR-1003-3p 6mer3-8 ATGTGA X 6818313 6818318 - X_6818313_6818318_- 0.990274428 0.973284652 0.98177954 0.012013532 Nf-YC FBtr0070974 6818176 6818700 X - 6818293 6818330 3'utr Nf-YC FlyBase G65291.1 ATTAGTGTATGTATGTGACGGGTGACGGATGCCACCGG 10 6818319 0.675501185 5 7 49 0.769230769 0.698970004 0.538461538 0.2 0.384615385 10 2 1 10 X:6818293-6818330 6 Nf-YC FBtr0070974 6818176 6818700 ATGTGA 6mer3-8 dme-miR-1003-3p X - 6818293 6818327 3'utr Nf-YC FlyBase G49180.1 AGTGTATGTATGTGACGGGTGACGGATGCCACCGG 6 6818319 0.706875651 3 5 31 0.888888889 0.903089987 0 0.5 0.666666667 6 1 0 8 X:6818293-6818327 6 7.5 4513 FBgn0029905 205.9466667 9.923333333 15.23333333 0.036417195 0.755794424 0.492341357 1 1 1 0.15 dme-miR-980-3p 6mer3-8 GGCAGC X 6818417 6818422 - X_6818417_6818422_- 0.964830878 0.987049523 0.975940201 0.015710923 Nf-YC FBtr0070974 6818176 6818700 X - 6818401 6818444 3'utr Nf-YC FlyBase G65292.1 ATTGCTGACCCTCCCGCCCCCTGGCAGCAGGTTTCACCTTCTCC 11 6818423 0.941393583 2 11 48 1 1.079181246 0.166666667 0.090909091 0.166666667 11 0 0 12 X:6818401-6818444 6 Nf-YC FBtr0070974 6818176 6818700 GGCAGC 6mer3-8 dme-miR-980-3p X - 6818408 6818473 3'utr Nf-YC FlyBase G49181.1 GTGTAGAAACGATTTCTCAATTGTAATTTATTGCTGACCCTCCCGCCCCCTGGCAGCAGGTTTCAC 9 6818423 0.99961713 4 8 46 0.928571429 1.113943352 0.071428571 0.333333333 0.571428571 9 1 0 13 X:6818408-6818473 6 7 4514 FBgn0029905 205.9466667 9.923333333 15.23333333 0.033989382 0.705408129 0.4595186 1 1 1 0.15 dme-miR-11-3p 7mer-m1 TGTGATG X 6839650 6839656 - X_6839650_6839656_- 0.535305962 0.535538866 0.535422414 0.000164685 CG14435 FBtr0071042|FBtr0343323 6839430|6838172 6840376|6840376 X - 6839636 6839683 3'utr CG14435 FlyBase G65305.1 ACCAACCAACAAAAGAATGTCAACCAATGTGATGTTAAATTTTATATT 58 6839649 0.986446574 7 53 460 0.929577465 1.51851394 0.112676056 0.206896552 0.352112676 58 4 1 66 X:6839636-6839683 7 CG14435 FBtr0343323|FBtr0071042 6838172|6839430 6840376|6840376 TGTGATG 7mer-m1 dme-miR-11-3p X - 6839635 6839682 3'utr CG14435 FlyBase G49188.2 CCAACCAACAAAAGAATGTCAACCAATGTGATGTTAAATTTTATATTT 45 6839649 0.987678926 9 39 361 0.880597015 1.469822016 0.23880597 0.355555556 0.567164179 45 7 1 59 X:6839635-6839682 7 48.5 4515 FBgn0029911 561.5333333 25.08 38.61666667 0.086370652 1.933811802 1.255934398 -7 -7 -7 0.15 dme-miR-282-5p 8mer-A1 AGAGGCTA X 6839994 6840001 - X_6839994_6840001_- 0.633149902 0.636243375 0.634696639 0.002187435 CG14435 FBtr0071042|FBtr0343323 6839430|6838172 6840376|6840376 X - 6839989 6840050 3'utr CG14435 FlyBase G65308.1 GACACTGCGACCAGTTGGAGCTTGGAAAGATTGGAGGATGGTACATGGGAGAGGCTATGCCA 8 6840019 0.831677519 6 7 34 1 0.903089987 0.25 0 0 8 0 0 8 X:6839989-6840050 8 CG14435 FBtr0343323|FBtr0071042 6838172|6839430 6840376|6840376 AGAGGCTA 8mer-A1 dme-miR-282-5p X - 6839986 6840051 3'utr CG14435 FlyBase G49191.1 GGACACTGCGACCAGTTGGAGCTTGGAAAGATTGGAGGATGGTACATGGGAGAGGCTATGCCACAA 6 6840005 0.946542835 3 5 25 1 0.954242509 0.444444444 0.5 0.666666667 6 0 0 9 X:6839986-6840051 8 3.5 4516 FBgn0029911 561.5333333 25.08 38.61666667 0.006232934 0.139553429 0.090634441 18 4 11 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC X 6851723 6851729 + X_6851723_6851729_+ 0.306049637 0.517805917 0.411927777 0.149734316 CG4558 FBtr0070995|FBtr0300177 6851128|6851390 6851884|6851884 X + 6851685 6851839 3'utr CG4558 FlyBase G59445.1 CAGTTAACAGTTAGCTCCTGGCAGCCGCGCTTCATCCTTGTGTTCGTCGTTCTAACCATTTTGCATTTAAAACTCTCGACTCTACGTTCTGTTCACACCAACTAGCGTAGCCAACGGAAAGCGATTTTGTAAATATCCATTGCCAGACTTGAGTT 94 6851745 0.986301179 14 91 781 0.981481481 2.025305865 0.064814815 0.138297872 0.25 94 2 0 106 X:6851685-6851839 7 CG4558 FBtr0070995|FBtr0300177 6851128|6851390 6851884|6851884 TGTGTTC 7mer-m8 dme-miR-317-3p X + 6851688 6851814 3'utr CG4558 FlyBase G44966.1 TTAACAGTTAGCTCCTGGCAGCCGCGCTTCATCCTTGTGTTCGTCGTTCTAACCATTTTGCATTTAAAACTCTCGACTCTACGTTCTGTTCACACCAACTAGCGTAGCCAACGGAAAGCGATTTTGT 39 6851722 0.987748038 8 37 331 0.943396226 1.22184875 0.169811321 0.230769231 0.433962264 39 1 2 50 X:6851688-6851814 7 24 4517 FBgn0029914 220.6666667 13.97333333 21.30666667 0.108761329 1.717557252 1.12640801 -22 1 -10.5 0.15 dme-miR-277-3p 8mer-A1 TGCATTTA X 6851746 6851753 + X_6851746_6851753_+ 0.624366851 0.607500997 0.615933924 0.011925992 CG4558 FBtr0070995|FBtr0300177 6851128|6851390 6851884|6851884 X + 6851685 6851839 3'utr CG4558 FlyBase G59445.1 CAGTTAACAGTTAGCTCCTGGCAGCCGCGCTTCATCCTTGTGTTCGTCGTTCTAACCATTTTGCATTTAAAACTCTCGACTCTACGTTCTGTTCACACCAACTAGCGTAGCCAACGGAAAGCGATTTTGTAAATATCCATTGCCAGACTTGAGTT 94 6851745 0.986301179 14 91 781 0.981481481 2.025305865 0.064814815 0.138297872 0.25 94 2 0 106 X:6851685-6851839 8 CG4558 FBtr0070995|FBtr0300177 6851128|6851390 6851884|6851884 TGCATTTA 8mer-A1 dme-miR-277-3p X + 6851688 6851814 3'utr CG4558 FlyBase G44966.1 TTAACAGTTAGCTCCTGGCAGCCGCGCTTCATCCTTGTGTTCGTCGTTCTAACCATTTTGCATTTAAAACTCTCGACTCTACGTTCTGTTCACACCAACTAGCGTAGCCAACGGAAAGCGATTTTGT 39 6851722 0.987748038 8 37 331 0.943396226 1.22184875 0.169811321 0.230769231 0.433962264 39 1 2 50 X:6851688-6851814 8 20 4518 FBgn0029914 220.6666667 13.97333333 21.30666667 0.090634441 1.43129771 0.938673342 1 24 12.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 6851938 6851943 - X_6851938_6851943_- 0.755360682 0.755362728 0.755361705 1.41E-06 CG14434 FBtr0345899|FBtr0345899|FBtr0345899|FBtr0343322|FBtr0343322|FBtr0343322|FBtr0071040|FBtr0071040|FBtr0071040 6851907|6851907|6851907|6851907|6851907|6851907|6851907|6851907|6851907 6852045|6852045|6852045|6852045|6852045|6852045|6852045|6852045|6852045 X - 6851926 6851955 3'utr CG14434 FlyBase G65314.1 CCATAAAACATTCTGTGAGGCAAACAAAAA 5 6851942 0.908657898 3 5 17 1 0.903089987 0 0.6 0.75 5 0 0 8 X:6851926-6851955 6 CG14434 FBtr0071040|FBtr0071040|FBtr0071040|FBtr0343322|FBtr0343322|FBtr0343322|FBtr0345899|FBtr0345899|FBtr0345899 6851907|6851907|6851907|6851907|6851907|6851907|6851907|6851907|6851907 6852045|6852045|6852045|6852045|6852045|6852045|6852045|6852045|6852045 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X - 6851927 6851962 3'utr CG14434 FlyBase G49195.1 TTGTTATCCATAAAACATTCTGTGAGGCAAACAAAA 10 6851942 0.95233215 3 8 41 0.875 1.146128036 0 0.4 0.625 10 2 0 14 X:6851927-6851962 6 7.5 4519 FBgn0029915 147.6666667 23.04333333 35.10666667 0.050790068 0.325473745 0.213634637 -1 -1 -1 0.15 dme-bantam-3p 6mer2-7 GATCTC X 6879019 6879024 + X_6879019_6879024_+ 0.999987074 0.999999997 0.999993536 9.12E-06 CG43736 FBtr0345898|FBtr0330265|FBtr0330263|FBtr0330268|FBtr0330264 6878698|6878698|6878698|6878698|6878698 6881580|6880502|6880429|6881580|6880095 X + 6878965 6879061 3'utr CG43736 FlyBase G59476.1 CGCCACCGCCAGCTCCGGCAGTTCCAGCCACACCACCCGGAGCGGGAACCATTGGATCTCCTGCACTATCAGCAACACCTGTACACACCACCAGCAA 53 6879017 0.952118737 7 51 225 0.966666667 1.462397998 0.266666667 0.113207547 0.216666667 53 1 1 58 X:6878965-6879061 6 CG43736 FBtr0345898|FBtr0330265|FBtr0330268|FBtr0330263|FBtr0330264 6878698|6878698|6878698|6878698|6878698 6881580|6880502|6881580|6880429|6880095 GATCTC 6mer2-7 dme-bantam-3p X + 6878965 6879063 3'utr CG43736 FlyBase G44982.1 CGCCACCGCCAGCTCCGGCAGTTCCAGCCACACCACCCGGAGCGGGAACCATTGGATCTCCTGCACTATCAGCAACACCTGTACACACCACCAGCAACA 43 6879026 0.950015205 7 42 182 0.985294118 1.826074803 0.25 0.348837209 0.588235294 43 1 0 67 X:6878965-6879063 6 43.5 4520 FBgn0263993 1284.363333 32.20666667 49.73 0.033868921 1.350652039 0.874723507 2 -7 -2.5 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 6958287 6958292 - X_6958287_6958292_- 0.961322679 0.87240048 0.91686158 0.062877491 CG32732 FBtr0071039 6958030 6958448 X - 6958274 6958310 3'utr CG32732 FlyBase G65319.1 CAGGTTTTGAAGTTGGATACCAAAATAACTTATAATT 14 6958294 0.725897259 6 10 89 0.705882353 1.079181246 0.294117647 0.214285714 0.352941176 14 5 0 12 X:6958274-6958310 6 CG32732 FBtr0071039 6958030 6958448 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X - 6958279 6958308 3'utr CG32732 FlyBase G49198.1 GGTTTTGAAGTTGGATACCAAAATAACTTA 8 6958294 0.737993789 4 7 44 0.9 0.954242509 0.1 0.25 0.4 8 1 0 9 X:6958279-6958308 6 11 4521 FBgn0052732 209.6666667 11.63 17.8 0.052464229 0.945829751 0.617977528 2 2 2 0.15 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC X 7098625 7098630 - X_7098625_7098630_- 0.796383758 0.785251464 0.790817611 0.007871725 CG4615 FBtr0071020 7098576 7099373 X - 7098605 7098715 3'utr CG4615 FlyBase G65350.1 ATTTACAAATACGCTTGATATCTTGATATTTTCGGGGCCTGGCTCGCGATCGGCGGATATAGCTTTCGTGTACTACTCGTATTTATGGTGCAGATCGATTAGTTTTAATGG 38 7098647 0.911034282 11 32 327 0.860465116 1.267171728 0.139534884 0.105263158 0.209302326 38 5 1 37 X:7098605-7098715 6 CG4615 FBtr0071020 7098576 7099373 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" X - 7098616 7098738 3'utr CG4615 FlyBase G49212.1 CGCAGATACTGAAGAAGGTGACTATTTACAAATACGCTTGATATCTTGATATTTTCGGGGCCTGGCTCGCGATCGGCGGATATAGCTTTCGTGTACTACTCGTATTTATGGTGCAGATCGATT 30 7098647 0.886985773 12 26 228 0.866666667 1.591064607 0.288888889 0.333333333 0.555555556 30 6 0 39 X:7098616-7098738 6 8 4522 FBgn0029935 110.3333333 6.846666667 10.52 0.072507553 1.168451801 0.760456274 17 17 17 0.15 dme-miR-283-5p 8mer-A1 TGATATTA X 7099063 7099070 - X_7099063_7099070_- 0.591232215 0.592122851 0.591677533 0.00062982 CG4615 FBtr0071020 7098576 7099373 X - 7099048 7099082 3'utr CG4615 FlyBase G65352.1 TCAACTTTAACTTGATATTATTAGCGATATTCATA 12 7099071 0.808919566 2 11 125 1 1.146128036 0 0.166666667 0.285714286 12 0 0 14 X:7099048-7099082 8 CG4615 FBtr0071020 7098576 7099373 TGATATTA 8mer-A1 dme-miR-283-5p X - 7098972 7099092 3'utr CG4615 FlyBase G49213.1 CCTCTCCCTCTCAACTTTAACTTGATATTATTAGCGATATTCATATATTTAGTATCCATAACGACCCGTTTTGGCCATGTGTTTCTCAAAAGACTTTGAACCGTACTCAAAAGGCAAAGGA 38 7099071 0.985942427 9 35 343 0.933333333 1.447158031 0.316666667 0.394736842 0.616666667 38 3 1 56 X:7098972-7099092 8 13 4523 FBgn0029935 110.3333333 6.846666667 10.52 0.117824773 1.898734177 1.235741445 1 1 1 0.15 dme-miR-263a-5p 8mer-m1 GTGCCATT X 7106600 7106607 - X_7106600_7106607_- 0.309338056 0.329965563 0.319651809 0.014585845 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 X - 7106533 7106651 3'utr fz4 FlyBase G65363.1 AAACGCAATTGCAATCGTAGCCGTAATGCCTAATTGTATTCAGTGTGCCATTAGCTTTAGGGACTTAACTGAAACGAGTCAATATCATGAAATTACCTTAAAAGAGTCCTTTTCCAGCA 189 7106601 0.837215011 15 178 1536 0.946188341 2.02325246 0.098654709 0.142857143 0.273542601 189 11 1 211 X:7106533-7106651 8 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 GTGCCATT 8mer-m1 dme-miR-263a-5p X - 7106506 7106644 3'utr fz4 FlyBase G49223.1 ATTGCAATCGTAGCCGTAATGCCTAATTGTATTCAGTGTGCCATTAGCTTTAGGGACTTAACTGAAACGAGTCAATATCATGAAATTACCTTAAAAGAGTCCTTTTCCAGCAACGAACTTTGGCGGAATTACTGAGGGT 139 7106601 0.986372923 15 129 1095 0.917030568 1.84509804 0.15720524 0.431654676 0.655021834 139 17 2 210 X:7106506-7106644 8 124 4524 FBgn0027342 197.34 6.033333333 9.256666667 0.62835715 20.55248619 13.39575081 -6 -6 -6 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA X 7106666 7106673 - X_7106666_7106673_- 0.496952512 0.497951444 0.497451978 0.000706329 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 X - 7106655 7106702 3'utr fz4 FlyBase G65364.1 TGCTGTCTTCTCCCGATGCCGAAACAAGTGTACTTAACAATCGAAAAA 261 7106674 0.914030738 4 257 1204 0.99044586 2.191730393 0.207006369 0.16091954 0.302547771 261 2 1 311 X:7106655-7106702 8 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 GTACTTAA 8mer-A1 dme-miR-252-5p X - 7106654 7106702 3'utr fz4 FlyBase G49224.1 TGCTGTCTTCTCCCGATGCCGAAACAAGTGTACTTAACAATCGAAAAAA 165 7106674 0.9099972 5 162 763 0.988593156 2.414973348 0.19391635 0.43030303 0.642585551 165 3 0 260 X:7106654-7106702 8 208 4525 FBgn0027342 197.34 6.033333333 9.256666667 1.054018445 34.47513812 22.47029168 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA X 7106767 7106774 - X_7106767_7106774_- 0.650123267 0.650115891 0.650119579 5.23E-06 fz4 FBtr0071018|FBtr0071018|FBtr0071018|FBtr0071017|FBtr0071017|FBtr0071017 7106270|7106270|7106270|7106270|7106270|7106270 7107380|7107380|7107380|7107380|7107380|7107380 X - 7106737 7106793 3'utr fz4 FlyBase G65365.1 AACGCGCAGCAACCAAATACTGTGATACGCATGTTCATGTCTTCAAAAACAAAAAAA 70 7106776 0.954505714 6 66 265 0.939759036 1.892094603 0.301204819 0.171428571 0.301204819 70 5 0 78 X:7106737-7106793 8 fz4 FBtr0071018|FBtr0071018|FBtr0071018|FBtr0071017|FBtr0071017|FBtr0071017 7106270|7106270|7106270|7106270|7106270|7106270 7107380|7107380|7107380|7107380|7107380|7107380 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 7106755 7106798 3'utr fz4 FlyBase G49225.1 AGAGAAACGCGCAGCAACCAAATACTGTGATACGCATGTTCATG 33 7106776 0.929823187 3 28 104 0.847457627 1.22184875 0.271186441 0.484848485 0.711864407 33 7 2 50 X:7106755-7106798 8 50 4526 FBgn0027342 197.34 6.033333333 9.256666667 0.253369819 8.287292818 5.401512423 2 2 2 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA X 7106984 7106991 - X_7106984_7106991_- 0.497641708 0.498202394 0.497922051 0.000396475 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 X - 7106967 7107012 3'utr fz4 FlyBase G65366.2 TCATATCCTATTTTCCTGTGTGTACTTAATGTTGCTCCTAATTAGT 158 7106992 0.808230906 8 146 1920 0.924324324 2.23299611 0.021621622 0.139240506 0.264864865 158 14 0 171 X:7106967-7107012 8 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 GTACTTAA 8mer-A1 dme-miR-252-5p X - 7106971 7107017 3'utr fz4 FlyBase G49227.1 GGGCTTCATATCCTATTTTCCTGTGTGTACTTAATGTTGCTCCTAAT 123 7106992 0.799816306 7 119 1476 0.967914439 2.257678575 0.026737968 0.390243902 0.598930481 123 6 0 181 X:7106971-7107017 8 140 4527 FBgn0027342 197.34 6.033333333 9.256666667 0.709435492 23.20441989 15.12423479 1 1 1 0.15 dme-miR-276a-3p 6mer2-7 GTTCCT X 7107318 7107323 - X_7107318_7107323_- 0.965073953 0.99798247 0.981528212 0.023269824 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 X - 7107262 7107446 stop_codon fz4 FlyBase G65368.1 AAGTACAGCCAGCACGGCAGCTACTATCCCCACTTGCAGCAGTATGGCAATGAGACGCTACTCTAGACGGAATTGGATTAGGTACCATTTCAGGGCAGGAAATGCTTCCTGCTTCCAGTCAATGTTCCTGCAGCAGCTGCTGTGCCAAAGTCAATCCTCTACTATAACTTAATGCGGTTTCGGGT 61 7107324 0.977823112 19 56 369 0.927536232 1.806179974 0.101449275 0.114754098 0.217391304 61 5 0 64 X:7107262-7107446 6 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 GTTCCT 6mer2-7 dme-miR-276a-3p X - 7107297 7107378 3'utr fz4 FlyBase G49229.1 GGAATTGGATTAGGTACCATTTCAGGGCAGGAAATGCTTCCTGCTTCCAGTCAATGTTCCTGCAGCAGCTGCTGTGCCAAAG 32 7107324 0.981795499 8 28 203 0.924528302 1.69019608 0.169811321 0.34375 0.603773585 32 4 0 49 X:7107297-7107378 6 29.5 4528 FBgn0027342 197.34 6.033333333 9.256666667 0.149488193 4.889502762 3.18689233 1 1 1 0.15 dme-miR-33-5p 7mer-m8 CAATGCA X 7281196 7281202 - X_7281196_7281202_- 0.65826182 0.606679852 0.632470836 0.036473911 CG1677 FBtr0303415|FBtr0339819|FBtr0089712|FBtr0339820 7281087|7281087|7281087|7281087 7281438|7281438|7281438|7281438 X - 7281180 7281262 3'utr CG1677 FlyBase G65370.1 ATTCGCATCGTATTCGATATTGCCTTCGCCTGGGTGCAGCCGCTCGATCGCCATACAATTCAATGCATTTAGATTTAATAATC 53 7281203 0.990099778 12 50 506 0.948275862 1.740362689 0.103448276 0.094339623 0.172413793 53 3 0 55 X:7281180-7281262 7 CG1677 FBtr0089712|FBtr0339820|FBtr0303415|FBtr0339819 7281087|7281087|7281087|7281087 7281438|7281438|7281438|7281438 CAATGCA 7mer-m8 dme-miR-33-5p X - 7281133 7281248 3'utr CG1677 FlyBase G49232.1 CGATATTGCCTTCGCCTGGGTGCAGCCGCTCGATCGCCATACAATTCAATGCATTTAGATTTAATAATCATTATCCATTTTCCTACCCTGACTATTGCCAACTGAAGAGCATCAAT 51 7281195 0.985175751 15 38 397 0.784615385 1.707570176 0.138461538 0.254901961 0.415384615 51 14 0 51 X:7281133-7281248 7 37 4529 FBgn0029941 1454.373333 48.72333333 74.88666667 0.02544051 0.759389752 0.494079943 1 -7 -3 0.15 dme-miR-190-5p 7mer-m8 ACATATC X 7281310 7281316 - X_7281310_7281316_- 0.669007255 0.673253212 0.671130234 0.003002305 CG1677 FBtr0303415|FBtr0339819|FBtr0089712|FBtr0339820 7281087|7281087|7281087|7281087 7281438|7281438|7281438|7281438 X - 7281289 7281313 3'utr CG1677 FlyBase G65371.1 TATCCGATGGATATCGGAACGGCAT 5 7281311 0.958736298 3 3 21 0.5 0.602059991 0 0.6 0.75 5 4 0 4 X:7281289-7281313 4 CG1677 FBtr0089712|FBtr0339820|FBtr0303415|FBtr0339819 7281087|7281087|7281087|7281087 7281438|7281438|7281438|7281438 ACATATC 7mer-m8 dme-miR-190-5p X - 7281288 7281316 3'utr CG1677 FlyBase G49233.1 ACATATCCGATGGATATCGGAACGGCATC 8 7281306 0.924665961 2 6 30 0.923076923 1.079181246 0 0.375 0.615384615 8 1 0 12 X:7281288-7281316 7 6.5 4530 FBgn0029941 1454.373333 48.72333333 74.88666667 0.004469279 0.133406308 0.086797828 -5 -10 -7.5 0.15 dme-bantam-3p 7mer-m8 TGATCTC X 7288893 7288899 - X_7288893_7288899_- 0.661615243 0.661615243 0.661615243 0 unc-119 FBtr0071066|FBtr0346619 7288678|7288365 7289145|7289145 X - 7288868 7288978 5'utr unc-119 FlyBase G65393.2 ATATTATCACAGCCATTTTAGCCTTAGCACACCAAAGTTTTACCCACCATTCCTGTTTGATGTATTTAGCATCAAGATATGATCTCCTGCAAACGGAAACTAACACACAAA 384 7288899 0.97740174 9 374 2174 0.975 2.369215857 0.05625 0.203125 0.3625 384 11 1 468 X:7288868-7288978 7 unc-119 FBtr0346619|FBtr0071066 7288365|7288678 7289145|7289145 TGATCTC 7mer-m8 dme-bantam-3p X - 7288873 7288946 5'utr unc-119 FlyBase G49250.2 CAAAGTTTTACCCACCATTCCTGTTTGATGTATTTAGCATCAAGATATGATCTCCTGCAAACGGAAACTAACAC 284 7288891 0.848882889 10 278 1575 0.972850679 2.633468456 0.076923077 0.383802817 0.604072398 284 12 0 430 X:7288873-7288946 7 327.5 4531 FBgn0025549 924.56 49.97333333 77.10666667 0.354222549 6.553495197 4.24736296 0 -8 -4 0.15 dme-miR-278-3p 6mer3-8 CCCACC X 7310662 7310667 + X_7310662_7310667_+ 0.943463055 0.974341381 0.958902218 0.021834255 brk FBtr0071048 7310586 7311132 X + 7310632 7310722 3'utr brk FlyBase G59505.1 ACACACAATAGAAACTAAGGAAGCAGCAATCCCACCAATCGGATGTTATAATGGCAGTCACTGGGCCTGGCCTTTTAGTTCCCTAAGCCAT 284 7310683 0.948680829 15 277 1505 0.971518987 2.18610838 0.212025316 0.095070423 0.186708861 284 8 1 307 X:7310632-7310722 6 brk FBtr0071048 7310586 7311132 CCCACC 6mer3-8 dme-miR-278-3p X + 7310626 7310719 3'utr brk FlyBase G45001.1 AACAACACACACAATAGAAACTAAGGAAGCAGCAATCCCACCAATCGGATGTTATAATGGCAGTCACTGGGCCTGGCCTTTTAGTTCCCTAAGC 169 7310683 0.947540999 14 165 848 0.984375 2.100370545 0.26953125 0.366863905 0.58203125 169 3 1 252 X:7310626-7310719 6 97.5 4532 FBgn0024250 227.5733333 8.686666667 13.37 0.428433326 11.22409823 7.292445774 -21 -21 -21 0.15 dme-miR-7-5p 7mer-A1 TCTTCCA X 7310806 7310812 + X_7310806_7310812_+ 0.822051047 0.486884539 0.654467793 0.236998505 brk FBtr0071048 7310586 7311132 X + 7310775 7310837 3'utr brk FlyBase G59506.1 AAAAAATTGTATATCTAAGCGCAAACATATATCTTCCAAGCATATCAGCAAAAAAAACCCCAA 15 7310807 0.9674289 5 14 79 1 1.230448921 0 0.133333333 0.235294118 15 0 0 17 X:7310775-7310837 7 brk FBtr0071048 7310586 7311132 TCTTCCA 7mer-A1 dme-miR-7-5p X + 7310791 7310852 3'utr brk FlyBase G45002.1 AAGCGCAAACATATATCTTCCAAGCATATCAGCAAAAAAAACCCCAAACCCTAGGTATAAAC 15 7310807 0.97708675 5 12 72 0.869565217 1.301029996 0 0.333333333 0.565217391 15 3 0 20 X:7310791-7310852 7 13 4533 FBgn0024250 227.5733333 8.686666667 13.37 0.057124443 1.496546431 0.972326103 -1 -1 -1 0.15 dme-miR-308-3p 8mer-m1 CTGTGATT X 7328137 7328144 + X_7328137_7328144_+ 0.385532249 0.385550345 0.385541297 1.28E-05 Dok FBtr0071049 7327562 7328806 X + 7328114 7328344 3'utr Dok FlyBase G59524.1 GTTAATTATGTTAAATTCGTAATCTGTGATTGTATTGTTAATTGTGAAACTGTTACATTTTTAGCAAGCACTGCCCGCCACTTGATGATCGCACTCGAAAAATTCCCCCGGCTCTTACTTAAAATGTAGTGTTAAATTAAAGCAAGAGAAAAATGAAACTCAATCGAATCATGGACGTAACGAAAATTTACAAAATGTGTATGCGATTTATGCTAAATATATGTGTTTTTG 141 7328136 0.992598651 28 128 1472 0.904761905 2.181843588 0.369047619 0.177304965 0.30952381 141 16 0 152 X:7328114-7328344 8 Dok FBtr0071049 7327562 7328806 CTGTGATT 8mer-m1 dme-miR-308-3p X + 7328116 7328295 3'utr Dok FlyBase G45010.1 TAATTATGTTAAATTCGTAATCTGTGATTGTATTGTTAATTGTGAAACTGTTACATTTTTAGCAAGCACTGCCCGCCACTTGATGATCGCACTCGAAAAATTCCCCCGGCTCTTACTTAAAATGTAGTGTTAAATTAAAGCAAGAGAAAAATGAAACTCAATCGAATCATGGACGTAACG 108 7328136 0.999173397 20 97 1128 0.889570552 1.559308011 0.429447853 0.398148148 0.601226994 108 15 3 145 X:7328116-7328295 8 84 4534 FBgn0029944 523.09 18.16 27.87 0.160584221 4.625550661 3.013993541 1 1 1 0.15 dme-miR-308-3p 7mer-m1 TGTGATT X 758656 758662 + X_758656_758662_+ 0.51328764 0.519969427 0.516628533 0.004724746 CG5254 FBtr0070134|FBtr0343759 758553|758553 758719|758719 X + 758606 758671 3'utr CG5254 FlyBase G57841.1 AAGTCGATTAGTCGCGATCAATGCCATCAAGGGGATGCTACTCTTCCGATTGTGATTCGTCAATAA 47 758655 0.806305202 11 45 370 0.962264151 1.40654018 0.150943396 0.127659574 0.226415094 47 1 1 51 X:758606-758671 7 CG5254 FBtr0070134|FBtr0343759 758553|758553 758719|758719 TGTGATT 7mer-m1 dme-miR-308-3p X + 758596 758674 3'utr CG5254 FlyBase G43758.1 GTATAATAGTAAGTCGATTAGTCGCGATCAATGCCATCAAGGGGATGCTACTCTTCCGATTGTGATTCGTCAATAAATG 49 758655 0.971769121 7 49 380 1 1.886490725 0.181818182 0.326530612 0.571428571 49 0 0 77 X:758596-758674 7 35.5 4535 FBgn0040383 45.33333333 4.423333333 6.693333333 0.783088235 8.025621703 5.303784861 1 1 1 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 761419 761424 + X_761419_761424_+ 0.992843923 0.995430733 0.994137328 0.001829144 CG5273 FBtr0070137|FBtr0070136|FBtr0070135 761360|761360|761360 761939|761939|761939 X + 761383 761454 3'utr CG5273 FlyBase G57843.1 CCACTGTGCACCCACTCAATTACCCGACTACCTACTGTACCTTCCTCCCCAGCTGTTGTGGCCTTGGCGCGC 91 761418 0.75859921 10 89 574 0.981132075 2.017033339 0.245283019 0.153846154 0.273584906 91 2 0 104 X:761383-761454 6 CG5273 FBtr0070135|FBtr0070137|FBtr0070136 761360|761360|761360 761939|761939|761939 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X + 761387 761481 3'utr CG5273 FlyBase G43760.1 TGTGCACCCACTCAATTACCCGACTACCTACTGTACCTTCCTCCCCAGCTGTTGTGGCCTTGGCGCGCATATTTGCGCTGACCAACATCGATAAT 52 761418 0.759215953 10 50 312 0.987179487 1.886490725 0.217948718 0.346153846 0.564102564 52 1 0 77 X:761387-761481 6 62 4536 FBgn0040382 52 2.953333333 4.456666667 1.192307692 20.99322799 13.91174271 1 1 1 0.15 dme-miR-8-3p 7mer-m8 CAGTATT X 761536 761542 + X_761536_761542_+ 0.652868582 0.661615243 0.657241913 0.00618478 CG5273 FBtr0070137|FBtr0070136|FBtr0070135 761360|761360|761360 761939|761939|761939 X + 761507 761552 3'utr CG5273 FlyBase G57844.1 CTTGAATTATGCCGTACCATCTCCGACTACAGTATTTGTGGATAAA 9 761543 0.682774663 5 9 62 1 1 0.2 0.111111111 0.2 9 0 0 10 X:761507-761552 7 CG5273 FBtr0070135|FBtr0070137|FBtr0070136 761360|761360|761360 761939|761939|761939 CAGTATT 7mer-m8 dme-miR-8-3p X + 761496 761552 3'utr CG5273 FlyBase G43761.1 GGACAAAAACTCTTGAATTATGCCGTACCATCTCCGACTACAGTATTTGTGGATAAA 7 761543 0.982284897 6 7 53 1 0.84509804 0.428571429 0 0 7 0 0 7 X:761496-761552 7 5.5 4537 FBgn0040382 52 2.953333333 4.456666667 0.105769231 1.862302483 1.234106208 -7 -7 -7 0.15 dme-miR-308-3p 7mer-m1 TGTGATT X 761603 761609 + X_761603_761609_+ 0.521223648 0.521223025 0.521223336 4.24E-07 CG5273 FBtr0070137|FBtr0070136|FBtr0070135 761360|761360|761360 761939|761939|761939 X + 761574 761631 3'utr CG5273 FlyBase G57845.1 AAGCCCCCTTTTCCAATTTGGCCTTCAATTGTGATTGTTGCGGTGTGCATGGGCCCCG 98 761602 0.691776247 10 92 1007 0.929824561 1.326335861 0.394736842 0.112244898 0.236842105 98 4 4 106 X:761574-761631 7 CG5273 FBtr0070135|FBtr0070137|FBtr0070136 761360|761360|761360 761939|761939|761939 TGTGATT 7mer-m1 dme-miR-308-3p X + 761575 761637 3'utr CG5273 FlyBase G43762.1 AGCCCCCTTTTCCAATTTGGCCTTCAATTGTGATTGTTGCGGTGTGCATGGGCCCCGTAACCG 57 761602 0.991493225 5 54 573 0.947368421 1.653212514 0.357894737 0.543859649 0.726315789 57 4 1 90 X:761575-761637 7 76.5 4538 FBgn0040382 52 2.953333333 4.456666667 1.471153846 25.90293454 17.16529544 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 761863 761868 + X_761863_761868_+ 0.594333935 0.580089682 0.587211809 0.01007217 CG5273 FBtr0070137|FBtr0070137|FBtr0070137|FBtr0070136|FBtr0070136|FBtr0070136|FBtr0070135|FBtr0070135|FBtr0070135 761360|761360|761360|761360|761360|761360|761360|761360|761360 761939|761939|761939|761939|761939|761939|761939|761939|761939 X + 761811 761908 3'utr CG5273 FlyBase G57848.1 AGTGTGTATTTTTCTAGACTTGTTAGCGTAATTGTTGCTTGTTTTTGTATTGCTGTGAGCAAACGTATTTGTTGCACTCTTCAATTGTTGAATAAAAT 43 761833 0.993005276 10 39 473 0.903846154 1.070037867 0.211538462 0.214285714 0.365384615 42 2 3 47 X:761811-761908 6 CG5273 FBtr0070135|FBtr0070135|FBtr0070135|FBtr0070137|FBtr0070137|FBtr0070137|FBtr0070136|FBtr0070136|FBtr0070136 761360|761360|761360|761360|761360|761360|761360|761360|761360 761939|761939|761939|761939|761939|761939|761939|761939|761939 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X + 761797 761886 3'utr CG5273 FlyBase G43764.2 AAGTTCCCACTAAAAGTGTGTATTTTTCTAGACTTGTTAGCGTAATTGTTGCTTGTTTTTGTATTGCTGTGAGCAAACGTATTTGTTGCA 35 761833 0.990952476 11 33 355 0.94 1.672097858 0.22 0.371428571 0.56 35 3 0 47 X:761797-761886 6 13 4539 FBgn0040382 52 2.953333333 4.456666667 0.25 4.401805869 2.91697831 30 30 30 0.15 dme-miR-308-3p 7mer-m1 TGTGATT X 7674693 7674699 + X_7674693_7674699_+ 0.521212087 0.521108198 0.521160143 7.35E-05 ct FBtr0305134|FBtr0114613|FBtr0331733|FBtr0071068 7674616|7674616|7674616|7674616 7678259|7678259|7678859|7678259 X + 7674621 7674744 3'utr ct FlyBase G59555.1 AAAAAAATTAACAGAACTAAATATAAATTCAGTGCAATGTGTAGAGAAGCGGAGATGGTTAACGCGTTTACTTGTGATTAAGTTTGAATGTTTAGACGATGTGAGGAGCCAGGAGACATACATA 63 7674692 0.937190466 16 56 444 0.903614458 1.273001272 0.313253012 0.26984127 0.445783133 63 5 3 75 X:7674621-7674744 7 ct FBtr0331733|FBtr0071068|FBtr0305134|FBtr0114613 7674616|7674616|7674616|7674616 7678859|7678259|7678259|7678259 TGTGATT 7mer-m1 dme-miR-308-3p X + 7674633 7674749 3'utr ct FlyBase G45026.1 AGAACTAAATATAAATTCAGTGCAATGTGTAGAGAAGCGGAGATGGTTAACGCGTTTACTTGTGATTAAGTTTGAATGTTTAGACGATGTGAGGAGCCAGGAGACATACATACATAT 37 7674692 0.985683366 11 33 271 0.868852459 1.72427587 0.409836066 0.432432432 0.655737705 37 8 0 53 X:7674633-7674749 7 28 4540 FBgn0004198 1981.64 22.68666667 34.95666667 0.014129711 1.234205113 0.800991704 1 1 1 0.15 dme-miR-14-3p 7mer-m8 AAGACTG X 7675081 7675087 + X_7675081_7675087_+ 0.665848445 0.662483733 0.664166089 0.002379202 ct FBtr0305134|FBtr0114613|FBtr0331733|FBtr0071068 7674616|7674616|7674616|7674616 7678259|7678259|7678859|7678259 X + 7675061 7675114 3'utr ct FlyBase G59558.1 TTTCGATTTGTTTCTACTTGAAGACTGTAAGCAAAGGCGGTAGGATTGATAACT 27 7675079 0.755817829 9 23 177 0.862068966 1.397940009 0.344827586 0.037037037 0.103448276 27 4 0 25 X:7675061-7675114 7 ct FBtr0331733|FBtr0071068|FBtr0305134|FBtr0114613 7674616|7674616|7674616|7674616 7678859|7678259|7678259|7678259 AAGACTG 7mer-m8 dme-miR-14-3p X + 7675064 7675101 3'utr ct FlyBase G45028.1 CGATTTGTTTCTACTTGAAGACTGTAAGCAAAGGCGGT 13 7675078 0.965829158 6 12 81 0.947368421 1.255272505 0.368421053 0.307692308 0.526315789 13 1 0 18 X:7675064-7675101 7 18.5 4541 FBgn0004198 1981.64 22.68666667 34.95666667 0.009335702 0.81545695 0.529226662 2 3 2.5 0.15 dme-bantam-3p 8mer-A1 TGATCTCA X 7675334 7675341 + X_7675334_7675341_+ 0.631131576 0.631134767 0.631133172 2.26E-06 ct FBtr0305134|FBtr0114613|FBtr0331733|FBtr0071068 7674616|7674616|7674616|7674616 7678259|7678259|7678859|7678259 X + 7675308 7675352 3'utr ct FlyBase G59559.1 AGCAACCGACTTGTTTAACTATCTTTTGATCTCAAGCAAAAAAAC 101 7675333 0.671724459 7 94 893 0.920634921 1.462397998 0.079365079 0.207920792 0.365079365 101 7 3 116 X:7675308-7675352 8 ct FBtr0331733|FBtr0071068|FBtr0305134|FBtr0114613 7674616|7674616|7674616|7674616 7678859|7678259|7678259|7678259 TGATCTCA 8mer-A1 dme-bantam-3p X + 7675307 7675354 3'utr ct FlyBase G45029.1 CAGCAACCGACTTGTTTAACTATCTTTTGATCTCAAGCAAAAAAACAA 64 7675333 0.97423803 8 60 507 0.944444444 1.62838893 0.033333333 0.34375 0.533333333 64 4 1 85 X:7675307-7675354 8 80 4542 FBgn0004198 1981.64 22.68666667 34.95666667 0.040370602 3.526300323 2.288547726 1 1 1 0.15 dme-miR-1012-3p 7mer-A1 TGACTAA X 7683998 7684004 - X_7683998_7684004_- 0.775453817 0.737209726 0.756331772 0.027042662 CHES-1-like FBtr0112946|FBtr0310287|FBtr0333203 7683456|7682336|7683456 7685914|7685914|7685914 X - 7683972 7684034 3'utr CHES-1-like FlyBase G65412.1 TGCCTTGATGCATATTTTGGGGAAAGAATGTGACTAAAATACCAGAAGCGAGAACAACAAAAT 33 7684006 0.972380031 4 32 189 0.975 1.591064607 0.25 0.121212121 0.275 33 1 0 39 X:7683972-7684034 7 CHES-1-like FBtr0310287|FBtr0333203|FBtr0112946 7682336|7683456|7683456 7685914|7685914|7685914 TGACTAA 7mer-A1 dme-miR-1012-3p X - 7683982 7684050 3'utr CHES-1-like FlyBase G49261.1 AATTACATAAAAATATTGCCTTGATGCATATTTTGGGGAAAGAATGTGACTAAAATACCAGAAGCGAGA 30 7684006 0.9206675 6 28 165 0.977272727 1.633468456 0.477272727 0.233333333 0.477272727 30 1 0 43 X:7683982-7684050 7 28 4543 FBgn0029504 1761.533333 36.18333333 55.28333333 0.015895243 0.773836942 0.506481761 2 2 2 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 7684309 7684314 - X_7684309_7684314_- 0.999999813 0.999999957 0.999999885 1.41E-07 CHES-1-like FBtr0112946|FBtr0310287|FBtr0333203 7683456|7682336|7683456 7685914|7685914|7685914 X - 7684251 7684363 3'utr CHES-1-like FlyBase G65414.1 CGAAAGGAAAAAAACTTGACAAAGAACGCCCTAAGTGTTTACACTTCATGTACCTTTTTAGCAAAAAGCAAAAAACGCAAAAGCAAAGATCGCATTAAAATTGTATACATACA 266 7684315 0.989886426 10 259 2554 0.975384615 1.898999271 0.101538462 0.191729323 0.338461538 266 5 3 317 X:7684251-7684363 6 CHES-1-like FBtr0310287|FBtr0333203|FBtr0112946 7682336|7683456|7683456 7685914|7685914|7685914 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X - 7684291 7684360 3'utr CHES-1-like FlyBase G49263.1 AAGGAAAAAAACTTGACAAAGAACGCCCTAAGTGTTTACACTTCATGTACCTTTTTAGCAAAAAGCAAAA 145 7684315 0.968389814 7 139 1381 0.963133641 1.621176282 0.119815668 0.35862069 0.571428571 145 4 4 209 X:7684291-7684360 6 198 4544 FBgn0029504 1761.533333 36.18333333 55.28333333 0.112402074 5.472132658 3.581549593 1 1 1 0.15 dme-bantam-3p 6mer3-8 TGATCT X 7684962 7684967 - X_7684962_7684967_- 0.480468522 0.660342509 0.570405515 0.127190125 CHES-1-like FBtr0112946|FBtr0071079|FBtr0310287|FBtr0333203 7683456|7684885|7682336|7683456 7685914|7685914|7685914|7685914 X - 7684935 7684990 3'utr CHES-1-like FlyBase G65417.1 AGATCCAAAACACCCTACTTACATGATCTAAAAACAAGCGATATAAAAATATATAC 19 7684967 0.963327577 5 18 97 0.95 0.977723605 0 0.052631579 0.1 19 0 1 19 X:7684935-7684990 6 CHES-1-like FBtr0310287|FBtr0333203|FBtr0112946|FBtr0071079 7682336|7683456|7683456|7684885 7685914|7685914|7685914|7685914 TGATCT 6mer3-8 dme-bantam-3p X - 7684941 7684991 3'utr CHES-1-like FlyBase G49267.1 AAGATCCAAAACACCCTACTTACATGATCTAAAAACAAGCGATATAAAAAT 15 7684968 0.683008575 3 12 73 0.807692308 1.322219295 0.076923077 0.466666667 0.692307692 15 5 0 21 X:7684941-7684991 6 16 4545 FBgn0029504 1761.533333 36.18333333 55.28333333 0.009082996 0.442192538 0.289418149 0 1 0.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 7685585 7685590 - X_7685585_7685590_- 0.999914005 0.840375595 0.9201448 0.112810684 CHES-1-like FBtr0112946|FBtr0112946|FBtr0112946|FBtr0071079|FBtr0071079|FBtr0071079|FBtr0310287|FBtr0310287|FBtr0310287|FBtr0333203|FBtr0333203|FBtr0333203 7683456|7683456|7683456|7684885|7684885|7684885|7682336|7682336|7682336|7683456|7683456|7683456 7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914 X - 7685564 7685602 3'utr CHES-1-like FlyBase G65419.1 AGGATTTTTTTTCTGTGACTTTACTGTGCCCCGCAATTA 7 7685592 0.99353295 5 7 78 1 1 0.2 0.428571429 0.6 7 0 0 10 X:7685564-7685602 6 CHES-1-like FBtr0310287|FBtr0310287|FBtr0310287|FBtr0333203|FBtr0333203|FBtr0333203|FBtr0112946|FBtr0112946|FBtr0112946|FBtr0071079|FBtr0071079|FBtr0071079 7682336|7682336|7682336|7683456|7683456|7683456|7683456|7683456|7683456|7684885|7684885|7684885 7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X - 7685564 7685605 3'utr CHES-1-like FlyBase G49269.1 TTTAGGATTTTTTTTCTGTGACTTTACTGTGCCCCGCAATTA 13 7685592 0.982777924 6 11 136 1 1.278753601 0.210526316 0.307692308 0.526315789 13 0 0 19 X:7685564-7685605 6 9 4546 FBgn0029504 1761.533333 36.18333333 55.28333333 0.005109185 0.248733303 0.162797709 2 2 2 0.15 dme-miR-277-3p 7mer-A1 GCATTTA X 7685766 7685772 - X_7685766_7685772_- 0.552924639 0.623874468 0.588399553 0.050169155 CHES-1-like FBtr0112946|FBtr0071079|FBtr0310287|FBtr0333203 7683456|7684885|7682336|7683456 7685914|7685914|7685914|7685914 X - 7685742 7685850 3'utr CHES-1-like FlyBase G65420.1 CGCCCCCGCCCATACGCCCTCCCGCCCATGCGATCTGTTGTTGTCTCTTTCTAAAGCAAAAATTGTTCAAATCACAGAGCATTTAGACTAAATTTTGTAATCTTAGCAA 164 7685768 0.836038764 17 157 1099 0.964285714 2.276461804 0.020408163 0.152439024 0.290816327 164 7 0 189 X:7685742-7685850 7 CHES-1-like FBtr0310287|FBtr0333203|FBtr0112946|FBtr0071079 7682336|7683456|7683456|7684885 7685914|7685914|7685914|7685914 GCATTTA 7mer-A1 dme-miR-277-3p X - 7685735 7685851 3'utr CHES-1-like FlyBase G49270.1 ACGCCCCCGCCCATACGCCCTCCCGCCCATGCGATCTGTTGTTGTCTCTTTCTAAAGCAAAAATTGTTCAAATCACAGAGCATTTAGACTAAATTTTGTAATCTTAGCAAGTTCATA 93 7685768 0.954212631 14 90 631 0.979020979 2.146128036 0.034965035 0.408602151 0.615384615 93 3 0 140 X:7685735-7685851 7 98.5 4547 FBgn0029504 1761.533333 36.18333333 55.28333333 0.055917193 2.722247812 1.781730479 -4 -4 -4 0.15 dme-miR-190-5p 6mer3-8 ACATAT X 7726119 7726124 - X_7726119_7726124_- 0.99943399 0.978376548 0.988905269 0.014889901 NELF-B FBtr0071077 7725994 7726358 X - 7726034 7726186 3'utr NELF-B FlyBase G65430.2 ATAATAATTCTACTGTTTAGACTAAACATAAAGCACTGCGACCGAGCAATCGGATATAGTTTACATATTTACAGAATGTATGGCTTTGTTGGCAGGCATCAATCAGTTGTCGCTGGCTATTATATATATTATATATTACTGTTACGCTAGTGT 32 7726107 0.834899757 14 28 244 0.948717949 1.568201724 0.128205128 0.15625 0.307692308 32 2 0 37 X:7726034-7726186 6 NELF-B FBtr0071077 7725994 7726358 ACATAT 6mer3-8 dme-miR-190-5p X - 7726084 7726176 3'utr NELF-B FlyBase G49276.1 TACTGTTTAGACTAAACATAAAGCACTGCGACCGAGCAATCGGATATAGTTTACATATTTACAGAATGTATGGCTTTGTTGGCAGGCATCAAT 16 7726110 0.987861642 7 14 118 0.884615385 1.361727836 0.192307692 0.5625 0.730769231 16 3 0 23 X:7726084-7726176 6 4 4548 FBgn0027553 119.3333333 6.51 9.91 0.033519553 0.614439324 0.403632694 -17 -14 -15.5 0.15 dme-miR-11-3p 7mer-m1 TGTGATG X 7726296 7726302 - X_7726296_7726302_- 0.509343461 0.410250544 0.459797003 0.070069332 NELF-B FBtr0071077 7725994 7726358 X - 7726286 7726320 3'utr NELF-B FlyBase G65431.2 CGGATGATGATGGTTATTTGTGATGATGATGTTGA 20 7726304 0.669886148 3 18 182 0.923076923 1.079181246 0.615384615 0.2 0.384615385 20 1 1 24 X:7726286-7726320 7 NELF-B FBtr0071077 7725994 7726358 TGTGATG 7mer-m1 dme-miR-11-3p X - 7726259 7726331 3'utr NELF-B FlyBase G49277.1 GCGGCTGTCGTCGGATGATGATGGTTATTTGTGATGATGATGTTGATGTTGATGATGATGATCGGAGGCCATG 16 7726304 0.987456345 8 16 147 1 1.447158031 0.571428571 0.4375 0.678571429 16 0 0 28 X:7726259-7726331 7 16 4549 FBgn0027553 119.3333333 6.51 9.91 0.134078212 2.457757296 1.614530777 2 2 2 0.15 dme-miR-79-3p 8mer-A1 TAGCTTTA X 7731283 7731290 + X_7731283_7731290_+ 0.624447523 0.624430263 0.624438893 1.22E-05 CG12155 FBtr0071071 7731144 7731729 X + 7731255 7731350 3'utr CG12155 FlyBase G59573.1 CAAGTTCGTGGATTCCGCGTTCTTCAATTAGCTTTATCCTCCACCCACGAAACCCCGGATCCCTGTATCCTTCACCCCTCTACACCATCCATTCGA 107 7731282 0.814626075 8 104 1026 0.965811966 1.752048448 0.042735043 0.08411215 0.162393162 107 3 1 113 X:7731255-7731350 8 CG12155 FBtr0071071 7731144 7731729 TAGCTTTA 8mer-A1 dme-miR-79-3p X + 7731218 7731303 3'utr CG12155 FlyBase G45038.1 ATGTATAGGATTAGGATGCGTACCGTTTACCAGTTTGCAAGTTCGTGGATTCCGCGTTCTTCAATTAGCTTTATCCTCCACCCACG 46 7731282 0.990999509 5 43 450 0.935483871 1.286306739 0.096774194 0.260869565 0.451612903 46 2 2 58 X:7731218-7731303 8 72 4550 FBgn0029957 249.8233333 11.22666667 17.11333333 0.288203664 6.413301663 4.207245812 1 1 1 0.15 dme-bantam-3p 6mer3-8 TGATCT X 7731482 7731487 + X_7731482_7731487_+ 0.923978464 0.997305671 0.960642068 0.05185016 CG12155 FBtr0071071 7731144 7731729 X + 7731442 7731526 3'utr CG12155 FlyBase G59574.1 ATTCGAAATTCTTAAAGTTGAATAGCTTGTTTGCAACAGATGATCTATACCTAAGTCTTAGGATTATCCTGGTTTCCCCCCCGTT 12 7731482 0.980772549 5 12 87 1 1.113943352 0.076923077 0.083333333 0.153846154 12 0 0 13 X:7731442-7731526 6 CG12155 FBtr0071071 7731144 7731729 TGATCT 6mer3-8 dme-bantam-3p X + 7731461 7731498 3'utr CG12155 FlyBase G45039.1 GAATAGCTTGTTTGCAACAGATGATCTATACCTAAGTC 6 7731482 0.879340714 2 5 39 0.9 0.954242509 0 0.5 0.7 6 1 0 9 X:7731461-7731498 6 6 4551 FBgn0029957 249.8233333 11.22666667 17.11333333 0.024016972 0.534441805 0.350603818 0 0 0 0.15 dme-miR-34-5p 6mer2-7 ACTGCC X 7896695 7896700 + X_7896695_7896700_+ 0.999984718 0.999913349 0.999949033 5.05E-05 p115 FBtr0071089|FBtr0340162 7896636|7896636 7896786|7896991 X + 7896672 7896711 3'utr p115 FlyBase G59609.2 ATGTTACAACTGGAAATTGCTCGACTGCCCTAAAAACGTT 35 7896691 0.671608008 7 28 170 0.829268293 0.929418926 0.024390244 0.114285714 0.243902439 35 4 3 34 X:7896672-7896711 6 p115 FBtr0071089|FBtr0340162 7896636|7896636 7896786|7896991 ACTGCC 6mer2-7 dme-miR-34-5p X + 7896649 7896708 3'utr p115 FlyBase G45057.1 CGGATGAGTTGCTAGCCACGTACATGTTACAACTGGAAATTGCTCGACTGCCCTAAAAAC 28 7896690 0.971030347 6 25 144 0.885714286 0.792391689 0 0.214285714 0.371428571 28 0 4 31 X:7896649-7896708 6 28.5 4552 FBgn0040087 268.6666667 11.33 17.27666667 0.106079404 2.515445719 1.64962377 4 5 4.5 0.15 dme-miR-282-5p 6mer2-7 GAGGCT X 7918075 7918080 + X_7918075_7918080_+ 0.994412012 0.950585643 0.972498827 0.030989945 snz FBtr0340148 7917322 7918444 X + 7918059 7918111 3'utr snz FlyBase G59652.1 AGACTAAGCGTTGATTGAGGCTGTCTTAAAAAACAGAACGTTTGATAACACAA 13 7918073 0.981191067 6 12 83 0.944444444 1.230448921 0.111111111 0.307692308 0.5 13 1 0 17 X:7918059-7918111 6 snz FBtr0340148 7917322 7918444 GAGGCT 6mer2-7 dme-miR-282-5p X + 7918018 7918096 3'utr snz FlyBase G45097.1 CCTAATTGACCAAAATTGGTAATGGTATCAAATAATCTTAAAGACTAAGCGTTGATTGAGGCTGTCTTAAAAAACAGAA 10 7918073 0.982909668 5 10 78 1 1.113943352 0 0.3 0.461538462 10 0 0 13 X:7918018-7918096 6 9.5 4553 FBgn0029976 1160.15 26.41 40.25666667 0.008188596 0.35971223 0.235985758 2 2 2 0.15 dme-miR-2a-2-5p 6mer3-8 TGATGA X 7921540 7921545 + X_7921540_7921545_+ 0.99999549 0.999999995 0.999997742 3.18E-06 Ykt6 FBtr0071093 7921363 7921966 X + 7921513 7921557 3'utr Ykt6 FlyBase G59657.1 TCCAAGGGAGCGGTGCGACTTGGGCTTTGATGATTGCTTTTTATA 9 7921553 0.986336974 6 9 81 1 0.954242509 0.111111111 0 0 9 0 0 9 X:7921513-7921557 6 Ykt6 FBtr0071093 7921363 7921966 TGATGA 6mer3-8 dme-miR-2a-2-5p X + 7921502 7921564 3'utr Ykt6 FlyBase G45102.1 ACCAAACAAACTCCAAGGGAGCGGTGCGACTTGGGCTTTGATGATTGCTTTTTATAAATGAAT 11 7921533 0.984549538 6 10 82 1 1.255272505 0.111111111 0.454545455 0.666666667 11 0 0 18 X:7921502-7921564 6 5.5 4554 FBgn0260858 601.62 50.32 77.46 0.009141983 0.109300477 0.071004389 -13 7 -3 0.15 dme-miR-965-3p 7mer-m8 TACGCTT X 7921678 7921684 + X_7921678_7921684_+ 0.612573177 0.620204848 0.616389013 0.005396356 Ykt6 FBtr0071093 7921363 7921966 X + 7921667 7921705 3'utr Ykt6 FlyBase G59658.1 CTGTATATGTCTACGCTTTGGATATCTAAATGTTAATTA 26 7921685 0.741762841 5 25 216 0.975 1.591064607 0.025 0.461538462 0.65 26 1 0 39 X:7921667-7921705 7 Ykt6 FBtr0071093 7921363 7921966 TACGCTT 7mer-m8 dme-miR-965-3p X + 7921663 7921697 3'utr Ykt6 FlyBase G45103.1 CTGTCTGTATATGTCTACGCTTTGGATATCTAAAT 12 7921685 0.648547452 3 12 103 1 1.278753601 0 0.5 0.684210526 12 0 0 19 X:7921663-7921697 7 19 4555 FBgn0260858 601.62 50.32 77.46 0.031581397 0.377583466 0.245287891 -7 -7 -7 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 7922994 7923000 - X_7922994_7923000_- 0.745941755 0.746317268 0.746129511 0.000265519 CG10777 FBtr0071132|FBtr0071132|FBtr0071132 7922156|7922156|7922156 7927227|7927227|7927227 X - 7922982 7923020 3'utr CG10777 FlyBase G65464.1 AAGTTGAAACCAAAACCCATTGTGATAACAGCTGCGTAA 51 7923001 0.861246483 3 48 219 0.945454545 1.238882089 0.036363636 0.078431373 0.145454545 51 1 2 52 X:7922982-7923020 7 CG10777 FBtr0071132|FBtr0071132|FBtr0071132 7922156|7922156|7922156 7927227|7927227|7927227 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 7922951 7923017 3'utr CG10777 FlyBase G49299.1 TTGAAACCAAAACCCATTGTGATAACAGCTGCGTAAACGAAACACGTTAGAACCTTACTTGTACGTA 34 7923001 0.941499744 3 32 131 0.960784314 1.213074825 0.078431373 0.411764706 0.607843137 34 0 2 49 X:7922951-7923017 7 41.5 4556 FBgn0029979 3423.163333 51.95333333 79.74333333 0.012123289 0.798793789 0.52041968 1 1 1 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 7924519 7924525 - X_7924519_7924525_- 0.54269169 0.617665086 0.580178388 0.0530142 CG10777 FBtr0344137|FBtr0344137|FBtr0344137|FBtr0071132|FBtr0071132|FBtr0071132 7924137|7924137|7924137|7922156|7922156|7922156 7927227|7927227|7927227|7927227|7927227|7927227 X - 7924489 7924558 3'utr CG10777 FlyBase G65468.1 AATTATGATTTTGATGCAACCGAATTGTGATGATGTGATAGACTTATATAAACAAACGAAAATACAAAAA 364 7924520 0.807271543 10 345 2483 0.943478261 1.407040808 0.519565217 0.197802198 0.365217391 364 10 16 434 X:7924489-7924558 7 CG10777 FBtr0071132|FBtr0071132|FBtr0071132|FBtr0344137|FBtr0344137|FBtr0344137 7922156|7922156|7922156|7924137|7924137|7924137 7927227|7927227|7927227|7927227|7927227|7927227 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 7924488 7924554 3'utr CG10777 FlyBase G49303.1 ATGATTTTGATGCAACCGAATTGTGATGATGTGATAGACTTATATAAACAAACGAAAATACAAAAAT 291 7924520 0.979076325 10 287 1966 0.981351981 2.3232521 0.524475524 0.374570447 0.575757576 291 7 1 421 X:7924488-7924554 7 325 4557 FBgn0029979 3423.163333 51.95333333 79.74333333 0.094941424 6.255614013 4.075575806 -5 -5 -5 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT X 7925176 7925182 - X_7925176_7925182_- 0.658933529 0.658921894 0.658927711 8.20E-06 CG10777 FBtr0344137|FBtr0071132 7924137|7922156 7927227|7927227 X - 7925147 7925210 3'utr CG10777 FlyBase G65472.1 GAGTAAATTAGTAGTAGTAACATTAATTGGCAGCTCCAGTCATATAGTTAGCAGTAATATATCC 750 7925184 0.821555035 10 731 5949 0.972619048 2.213252052 0.082142857 0.106666667 0.202380952 750 19 4 817 X:7925147-7925210 7 CG10777 FBtr0071132|FBtr0344137 7922156|7924137 7927227|7927227 GGCAGCT 7mer-m8 dme-miR-980-3p X - 7925119 7925210 3'utr CG10777 FlyBase G49308.1 GAGTAAATTAGTAGTAGTAACATTAATTGGCAGCTCCAGTCATATAGTTAGCAGTAATATATCCATATATCGTCTGTTCAAGCAGTTGTCCA 547 7925184 0.983931593 11 536 4195 0.978773585 2.317018101 0.091981132 0.402193784 0.614386792 547 15 3 830 X:7925119-7925210 7 639 4558 FBgn0029979 3423.163333 51.95333333 79.74333333 0.186669445 12.29949955 8.013209046 2 2 2 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC X 7926874 7926880 - X_7926874_7926880_- 0.661523942 0.661613807 0.661568874 6.36E-05 CG10777 FBtr0344137|FBtr0071132 7924137|7922156 7927227|7927227 X - 7926853 7926946 5'utr CG10777 FlyBase G65475.1 ACCAAAATCGTTGCCTTTTTGTTTCTATATTTATTCACACCTCACTACTAATATTAGTAGAACATTTGTGTTCTCTTTCGCTTATTTAAGCATT 18 7926881 0.92980884 7 18 193 1 1.380211242 0 0.333333333 0.5 18 0 0 24 X:7926853-7926946 7 CG10777 FBtr0071132|FBtr0344137 7922156|7924137 7927227|7927227 TGTGTTC 7mer-m8 dme-miR-317-3p X - 7926857 7926893 5'utr CG10777 FlyBase G49309.1 TTAGTAGAACATTTGTGTTCTCTTTCGCTTATTTAAG 6 7926881 0.983584543 3 6 64 1 0.954242509 0.111111111 0.333333333 0.555555556 6 0 0 9 X:7926857-7926893 7 9.5 4559 FBgn0029979 3423.163333 51.95333333 79.74333333 0.002775211 0.18285641 0.119132216 1 1 1 0.15 dme-miR-33-5p 6mer2-7 AATGCA X 7953124 7953129 + X_7953124_7953129_+ 0.937877529 0.972541932 0.955209731 0.024511432 CG42593 FBtr0301748|FBtr0331298|FBtr0331299 7952244|7952295|7952244 7953883|7953883|7953883 X + 7953099 7953175 3'utr CG42593 FlyBase G59695.1 ACAATAAACGAAAAGCGAATTGTGAAATGCATAGAAACTAGTTTGCATGCCCCATTATACATAAATATTATGTAATT 258 7953118 0.822940245 7 254 979 0.981308411 2.498310554 0.23364486 0.201550388 0.358255452 258 6 0 315 X:7953099-7953175 6 CG42593 FBtr0331299|FBtr0331298|FBtr0301748 7952244|7952295|7952244 7953883|7953883|7953883 AATGCA 6mer2-7 dme-miR-33-5p X + 7953057 7953160 3'utr CG42593 FlyBase G45130.1 ATTGCAACATAAACGAAAAATGATACAAAAAAAAAAAAAAAAACAATAAACGAAAAGCGAATTGTGAAATGCATAGAAACTAGTTTGCATGCCCCATTATACAT 207 7953118 0.935431087 8 203 772 0.986531987 2.165837625 0.259259259 0.29468599 0.508417508 207 3 1 293 X:7953057-7953160 6 228.5 4560 FBgn0260970 1474.483333 18.93666667 29.07666667 0.154969537 12.06653758 7.858534908 6 6 6 0.15 dme-miR-304-5p 8mer-A1 TGAGATTA X 8039152 8039159 - X_8039152_8039159_- 0.594696637 0.606426865 0.600561751 0.008294575 fs(1)h FBtr0071119|FBtr0333307 8038789|8037806 8040978|8040978 X - 8039141 8039193 3'utr fs(1)h FlyBase G65542.1 AAGAGCGATGAATTGTGGAACTGCAGGGTGTGGTTGAGATTAGGGATGCGTGT 15 8039160 0.731731998 4 15 101 1 1.176091259 0.4 0 0 15 0 0 15 X:8039141-8039193 8 fs(1)h FBtr0333307|FBtr0071119 8037806|8038789 8040978|8040978 TGAGATTA 8mer-A1 dme-miR-304-5p X - 8039131 8039177 3'utr fs(1)h FlyBase G49356.1 GGAACTGCAGGGTGTGGTTGAGATTAGGGATGCGTGTTTGTCTTTGT 5 8039160 0.981040276 3 4 36 0.9 0.954242509 0.4 0.4 0.7 5 1 0 9 X:8039131-8039177 8 7.5 4561 FBgn0004656 6894.06 89.92333333 138.4833333 0.001087893 0.083404382 0.054158142 1 1 1 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG X 8040319 8040324 - X_8040319_8040324_- 0.999986378 0.999992691 0.999989534 4.45E-06 fs(1)h FBtr0071119|FBtr0333307 8038789|8037806 8040978|8040978 X - 8040256 8040469 3'utr fs(1)h FlyBase G65547.1 AAAAAAAATGGCAAATTTCCTTCGGTTAGCAAATGATTCTTCGCAATTTTTTTAAAAATCACTTACCATCTCGCTTATTATTTTGTATTAAAATTACGATTATGATGATAATGGATCGTGGCGACAAAGATGTCCGCACATGTTTCCAAAGCTTATTATTTTTAATATTATTGATTGCCTAGGCAAGTTTAGTTCGTAGGTATACACTTAATTG 59 8040327 0.854125527 29 55 523 0.893333333 1.826074803 0.253333333 0.220338983 0.386666667 59 8 0 67 X:8040256-8040469 6 fs(1)h FBtr0333307|FBtr0071119 8037806|8038789 8040978|8040978 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" X - 8040303 8040339 3'utr fs(1)h FlyBase G49359.2 TGTCCGCACATGTTTCCAAAGCTTATTATTTTTAATA 10 8040327 0.670952118 3 8 100 0.823529412 1.146128036 0 0.5 0.705882353 10 3 0 14 X:8040303-8040339 6 11 4562 FBgn0004656 6894.06 89.92333333 138.4833333 0.001595576 0.122326426 0.079431941 3 3 3 0.15 dme-miR-2a-2-5p 6mer3-8 TGATGA X 8040362 8040367 - X_8040362_8040367_- 0.987585784 0.855449683 0.921517734 0.093434332 fs(1)h FBtr0071119|FBtr0333307 8038789|8037806 8040978|8040978 X - 8040256 8040469 3'utr fs(1)h FlyBase G65547.1 AAAAAAAATGGCAAATTTCCTTCGGTTAGCAAATGATTCTTCGCAATTTTTTTAAAAATCACTTACCATCTCGCTTATTATTTTGTATTAAAATTACGATTATGATGATAATGGATCGTGGCGACAAAGATGTCCGCACATGTTTCCAAAGCTTATTATTTTTAATATTATTGATTGCCTAGGCAAGTTTAGTTCGTAGGTATACACTTAATTG 59 8040366 0.854125527 29 55 523 0.893333333 1.826074803 0.253333333 0.220338983 0.386666667 59 8 0 67 X:8040256-8040469 6 fs(1)h FBtr0333307|FBtr0071119 8037806|8038789 8040978|8040978 TGATGA 6mer3-8 dme-miR-2a-2-5p X - 8040342 8040369 3'utr fs(1)h FlyBase G49360.1 TATGATGATAATGGATCGTGGCGACAAA 8 8040360 0.600155971 4 8 37 1 0.954242509 0.222222222 0.125 0.222222222 8 0 0 9 X:8040342-8040369 6 11.5 4563 FBgn0004656 6894.06 89.92333333 138.4833333 0.001668103 0.127886718 0.083042484 -1 -7 -4 0.15 dme-miR-2a-2-5p 7mer-A1 GATGAGA X 8046340 8046346 - X_8046340_8046346_- 0.738606795 0.740873209 0.739740002 0.001602587 fs(1)h FBtr0333309|FBtr0333308|FBtr0071118|FBtr0071120|FBtr0071121|FBtr0071122 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 X - 8046284 8046370 3'utr fs(1)h FlyBase G65562.1 TACAAAAAAAAAATGCATAGAAGAGATGAGAATGATTGATGATATGACGAGATGATAATGCAATGGAAATAAAGAAAATTTAAAAAA 104 8046344 0.96699543 11 102 514 0.967479675 2.075546961 0.268292683 0.163461538 0.292682927 104 4 0 119 X:8046284-8046370 7 fs(1)h FBtr0071121|FBtr0071122|FBtr0071120|FBtr0071118|FBtr0333309|FBtr0333308 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 GATGAGA 7mer-A1 dme-miR-2a-2-5p X - 8046301 8046357 3'utr fs(1)h FlyBase G49370.1 TGCATAGAAGAGATGAGAATGATTGATGATATGACGAGATGATAATGCAATGGAAAT 53 8046344 0.944576293 6 45 242 0.897727273 1.420505837 0.170454545 0.433962264 0.659090909 53 7 2 79 X:8046301-8046357 7 60 4564 FBgn0004656 6894.06 89.92333333 138.4833333 0.008703144 0.667235052 0.433265134 -2 -2 -2 0.15 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 8047748 8047754 - X_8047748_8047754_- 0.661589798 0.661579221 0.661584509 7.50E-06 fs(1)h FBtr0333309|FBtr0333308|FBtr0071118|FBtr0071120|FBtr0071121|FBtr0071122 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 X - 8047694 8047777 3'utr fs(1)h FlyBase G65563.1 TCTGTGCCAATTTCACATGTTTTTCTAGTCCTGTTTCTTGATAATTCAAATGTGTTAATCCAAGCTCCATTGTGACGATCCCTA 40 8047755 0.902335445 6 39 459 1 1.681241237 0.0625 0.125 0.270833333 40 0 0 48 X:8047694-8047777 7 fs(1)h FBtr0071121|FBtr0071122|FBtr0071120|FBtr0071118|FBtr0333309|FBtr0333308 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X - 8047736 8047769 3'utr fs(1)h FlyBase G49371.1 AATTTCACATGTTTTTCTAGTCCTGTTTCTTGAT 31 8047755 0.691819958 6 31 369 1 1.681241237 0.041666667 0.419354839 0.625 31 0 0 48 X:8047736-8047769 7 33 4565 FBgn0004656 6894.06 89.92333333 138.4833333 0.004786729 0.366979279 0.238295824 1 1 1 0.15 dme-miR-282-5p 6mer3-8 AGAGGC X 8048006 8048011 - X_8048006_8048011_- 0.946965296 0.88559769 0.916281493 0.043393446 fs(1)h FBtr0333309|FBtr0333308|FBtr0071118|FBtr0071120|FBtr0071121|FBtr0071122 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 X - 8047965 8048028 3'utr fs(1)h FlyBase G65564.1 ATGAGTATATATATCTCAGAGGCAGCTTACTAGCAATCTTCATCGATCATCATTATATCCATTC 37 8048000 0.978616371 5 33 229 0.871794872 1.054357662 0.025641026 0.054054054 0.102564103 37 3 2 34 X:8047965-8048028 6 fs(1)h FBtr0071121|FBtr0071122|FBtr0071120|FBtr0071118|FBtr0333309|FBtr0333308 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 AGAGGC 6mer3-8 dme-miR-282-5p X - 8047953 8048028 3'utr fs(1)h FlyBase G49372.1 ATGAGTATATATATCTCAGAGGCAGCTTACTAGCAATCTTCATCGATCATCATTATATCCATTCACCACTCCCCCA 30 8048000 0.975591747 7 27 176 0.913043478 1.62324929 0 0.433333333 0.630434783 30 4 0 42 X:8047953-8048028 6 32 4566 FBgn0004656 6894.06 89.92333333 138.4833333 0.004641677 0.355858694 0.231074738 -11 -11 -11 0.15 dme-miR-980-3p 6mer3-8 GGCAGC X 8048310 8048315 - X_8048310_8048315_- 0.712015789 0.925484739 0.818750264 0.150945307 fs(1)h FBtr0333309|FBtr0333308|FBtr0071118|FBtr0071120|FBtr0071121|FBtr0071122 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 X - 8048297 8048341 3'utr fs(1)h FlyBase G65565.1 AAATCGTGAAGCAATTGTGTATTGGGGGCAGCCAATTTGAAAAAG 13 8048327 0.845826529 5 12 89 1 1.113943352 0.461538462 0 0 13 0 0 13 X:8048297-8048341 6 fs(1)h FBtr0071121|FBtr0071122|FBtr0071120|FBtr0071118|FBtr0333309|FBtr0333308 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 GGCAGC 6mer3-8 dme-miR-980-3p X - 8048308 8048337 3'utr fs(1)h FlyBase G49373.1 CGTGAAGCAATTGTGTATTGGGGGCAGCCA 6 8048325 0.95011159 4 5 36 0.875 0.84509804 0.25 0.333333333 0.5 6 1 0 7 X:8048308-8048337 6 9.5 4567 FBgn0004656 6894.06 89.92333333 138.4833333 0.001377998 0.10564555 0.068600313 12 10 11 0.15 dme-miR-2a-2-5p 6mer3-8 TGATGA X 8049214 8049219 - X_8049214_8049219_- 0.99822394 0.998325511 0.998274725 7.18E-05 fs(1)h FBtr0333309|FBtr0333308|FBtr0071118|FBtr0071120|FBtr0071121|FBtr0071122 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 X - 8049208 8049247 3'utr fs(1)h FlyBase G65569.1 AAATTGAAACTTCCATTTGCCAATCGTCTGATGACTGATA 6 8049231 0.964691336 4 4 49 0.625 0.698970004 0 0.333333333 0.5 6 3 0 5 X:8049208-8049247 6 fs(1)h FBtr0071121|FBtr0071122|FBtr0071120|FBtr0071118|FBtr0333309|FBtr0333308 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 TGATGA 6mer3-8 dme-miR-2a-2-5p X - 8049206 8049233 3'utr fs(1)h FlyBase G49376.1 ATTTGCCAATCGTCTGATGACTGATATG 6 8049231 0.738476468 5 5 39 0.8 0.903089987 0 0.5 0.7 6 2 0 8 X:8049206-8049233 6 6 4568 FBgn0004656 6894.06 89.92333333 138.4833333 0.000870314 0.066723505 0.043326513 12 12 12 0.15 dme-miR-34-5p 7mer-A1 ACTGCCA X 8069173 8069179 + X_8069173_8069179_+ 0.805120574 0.814592429 0.809856502 0.006697574 mys FBtr0340135|FBtr0340137|FBtr0071105|FBtr0340136 8068934|8068934|8068934|8068934 8070237|8070237|8070237|8070237 X + 8069129 8069211 3'utr mys FlyBase G59706.1 CATCGACGAAGCTGCTTTGCCCGGGTGCAAAACCACTGAAGTCAACTGCCATTGAAACGCGTTCTAAACTAAGTCAGCCCTAT 68 8069180 0.844709416 8 68 285 1 1.986771734 0.195876289 0.294117647 0.505154639 68 0 0 97 X:8069129-8069211 7 mys FBtr0071105|FBtr0340136|FBtr0340135|FBtr0340137 8068934|8068934|8068934|8068934 8070237|8070237|8070237|8070237 ACTGCCA 7mer-A1 dme-miR-34-5p X + 8069133 8069209 3'utr mys FlyBase G45139.1 GACGAAGCTGCTTTGCCCGGGTGCAAAACCACTGAAGTCAACTGCCATTGAAACGCGTTCTAAACTAAGTCAGCCCT 63 8069180 0.949332646 11 62 269 0.990196078 2.004321374 0.264705882 0.428571429 0.647058824 63 1 0 101 X:8069133-8069209 7 60 4569 FBgn0004657 3546.84 102.2566667 157.0266667 0.016916466 0.58675881 0.382100705 -7 -7 -7 0.15 dme-miR-33-5p 6mer3-8 CAATGC X 8069721 8069726 + X_8069721_8069726_+ 0.999920121 0.965581203 0.982750662 0.024281269 mys FBtr0340135|FBtr0340137|FBtr0071105|FBtr0340136 8068934|8068934|8068934|8068934 8070237|8070237|8070237|8070237 X + 8069684 8069743 3'utr mys FlyBase G59710.1 AACTAATCTGCTACCCTCCCAAAACGGTCGTCCTTCGCAATGCCAAACCCCCCAACGTCT 45 8069717 0.939313451 6 45 200 1 1.69019608 0.306122449 0.088888889 0.163265306 45 0 0 49 X:8069684-8069743 6 mys FBtr0071105|FBtr0340136|FBtr0340135|FBtr0340137 8068934|8068934|8068934|8068934 8070237|8070237|8070237|8070237 CAATGC 6mer3-8 dme-miR-33-5p X + 8069682 8069752 3'utr mys FlyBase G45141.1 TTAACTAATCTGCTACCCTCCCAAAACGGTCGTCCTTCGCAATGCCAAACCCCCCAACGTCTTAATGTTTT 24 8069717 0.748701495 8 21 125 0.810810811 1.477121255 0.351351351 0.416666667 0.621621622 24 7 0 30 X:8069682-8069752 6 17 4570 FBgn0004657 3546.84 102.2566667 157.0266667 0.004792999 0.166248329 0.108261866 4 4 4 0.15 dme-miR-263a-5p 7mer-m1 TGCCATT X 8070017 8070023 + X_8070017_8070023_+ 0.765586305 0.764821369 0.765203837 0.000540866 mys FBtr0340135|FBtr0340137|FBtr0071105|FBtr0340136 8068934|8068934|8068934|8068934 8070237|8070237|8070237|8070237 X + 8070007 8070052 3'utr mys FlyBase G59712.1 ATATATTTTTTGCCATTTGTACTGATTACTGATTAACATTTAAAGT 67 8070023 0.642860456 12 64 695 0.949367089 1.574031268 0.050632911 0.149253731 0.278481013 67 3 1 75 X:8070007-8070052 7 mys FBtr0071105|FBtr0340136|FBtr0340135|FBtr0340137 8068934|8068934|8068934|8068934 8070237|8070237|8070237|8070237 TGCCATT 7mer-m1 dme-miR-263a-5p X + 8070003 8070047 3'utr mys FlyBase G45143.1 AAATATATATTTTTTGCCATTTGTACTGATTACTGATTAACATTT 41 8070023 0.729219999 10 36 433 0.859375 1.439332694 0.046875 0.390243902 0.609375 41 8 1 55 X:8070003-8070047 7 48 4571 FBgn0004657 3546.84 102.2566667 157.0266667 0.013533173 0.469407048 0.305680564 -6 -6 -6 0.15 dme-miR-252-5p 6mer3-8 GTACTT X 8070346 8070351 - X_8070346_8070351_- 0.999981991 0.999991324 0.999986658 6.58E-06 Upf2 FBtr0071117 8070242 8071284 X - 8070325 8070365 3'utr Upf2 FlyBase G65602.1 TGCATTGATGCTAGGTACTTTATCTCATGTTGTATAAGAAA 13 8070338 0.628639137 4 12 138 0.923076923 1.079181246 0.153846154 0 0 13 1 0 12 X:8070325-8070365 6 Upf2 FBtr0071117 8070242 8071284 GTACTT 6mer3-8 dme-miR-252-5p X - 8070326 8070364 3'utr Upf2 FlyBase G49403.1 GCATTGATGCTAGGTACTTTATCTCATGTTGTATAAGAA 6 8070338 0.640406874 3 6 60 1 1.041392685 0.363636364 0.666666667 0.818181818 6 0 0 11 X:8070326-8070364 6 9.5 4572 FBgn0029992 611.4266667 14.48666667 22.18333333 0.015537432 0.655775426 0.428249437 -13 -13 -13 0.15 dme-bantam-3p 6mer3-8 TGATCT X 8088674 8088679 - X_8088674_8088679_- 0.999904925 0.651569538 0.825737232 0.246310323 UbcE2H FBtr0071113|FBtr0071114|FBtr0071112 8088007|8088007|8087542 8089308|8089308|8089308 X - 8088618 8088724 5'utr UbcE2H FlyBase G65627.1 AAGTGCACATGCAATGCGAAATTTGACGAGAAATTGCTTTGGCCTTGATCTGGCATTAAACAGACTTCGATGCTCGTCGTTCTTTAGAGTTTAACAAGTTGATAGAA 15 8088679 0.98405202 10 15 117 1 1.176091259 0.266666667 0 0 15 0 0 15 X:8088618-8088724 6 UbcE2H FBtr0071114|FBtr0071112|FBtr0071113 8088007|8087542|8088007 8089308|8089308|8089308 TGATCT 6mer3-8 dme-bantam-3p X - 8088667 8088701 5'utr UbcE2H FlyBase G49418.1 TGACGAGAAATTGCTTTGGCCTTGATCTGGCATTA 6 8088686 0.886913661 2 6 47 1 1 0.2 0.333333333 0.6 6 0 0 10 X:8088667-8088701 6 7.5 4573 FBgn0029996 2080.593333 98.34666667 150.9166667 0.003604741 0.076260846 0.0496963 0 7 3.5 0.15 dme-miR-986-5p 6mer3-8 ATTCGA X 8089060 8089065 - X_8089060_8089065_- 0.999644328 0.999732457 0.999688393 6.24E-05 UbcE2H FBtr0071113|FBtr0071114|FBtr0071112 8088007|8088007|8087542 8089308|8089308|8089308 X - 8089034 8089105 5'utr UbcE2H FlyBase G65632.1 ATAATTGATAAATGATAATTGGATTTTAAGATAGAAAGTGATTCGATGATGGCGTGTGATGATCAGCGCACA 28 8089063 0.795574029 9 27 191 0.96875 1.491361694 0.25 0.142857143 0.25 28 1 0 31 X:8089034-8089105 6 UbcE2H FBtr0071114|FBtr0071112|FBtr0071113 8088007|8087542|8088007 8089308|8089308|8089308 ATTCGA 6mer3-8 dme-miR-986-5p X - 8089036 8089105 5'utr UbcE2H FlyBase G49421.1 ATAATTGATAAATGATAATTGGATTTTAAGATAGAAAGTGATTCGATGATGGCGTGTGATGATCAGCGCA 26 8089063 0.952230889 8 26 174 1 1.612783857 0.170731707 0.384615385 0.609756098 26 0 0 41 X:8089036-8089105 6 24 4574 FBgn0029996 2080.593333 98.34666667 150.9166667 0.011535171 0.244034707 0.159028161 -2 -2 -2 0.15 dme-miR-995-5p 7mer-m1 ATTCGGG X 8103466 8103472 - X_8103466_8103472_- 0.80884131 0.822457438 0.815649374 0.009628037 Gclc FBtr0071107|FBtr0340138|FBtr0071108|FBtr0340139 8102580|8102179|8102580|8102580 8103531|8103531|8103531|8103531 X - 8103449 8103534 stop_codon Gclc FlyBase G65652.1 TGATCGAGGAGCGCGCTGCGGACGCGTTCAGCGCAGCTGGCCGCCGGTGGCCGGCGCATGTGATTCGGGTTTTGTGGGTCCGTTCG 37 8103470 0.973353604 9 37 223 1 1.579783597 0.605263158 0.027027027 0.052631579 37 0 0 38 X:8103449-8103534 7 Gclc FBtr0071107|FBtr0340138|FBtr0071108|FBtr0340139 8102580|8102179|8102580|8102580 8103531|8103531|8103531|8103531 ATTCGGG 7mer-m1 dme-miR-995-5p X - 8103452 8103515 3'utr Gclc FlyBase G49434.1 GGACGCGTTCAGCGCAGCTGGCCGCCGGTGGCCGGCGCATGTGATTCGGGTTTTGTGGGTCCGT 20 8103470 0.978080341 5 20 137 1 1.431363764 0.518518519 0.3 0.481481481 20 0 0 27 X:8103452-8103515 7 25 4575 FBgn0040319 793.1366667 24.97666667 38.58666667 0.031520419 1.000934205 0.647892191 -2 -2 -2 0.15 dme-miR-277-3p 7mer-m8 TGCATTT X 8143958 8143964 - X_8143958_8143964_- 0.611458427 0.615188467 0.613323447 0.002637579 CG2263 FBtr0071190 8143902 8143998 X - 8143932 8143982 3'utr CG2263 FlyBase G65687.1 TAGGACCTGCGATCAAATTGCATTTTTTTTCACACATGAATGTTCCAAAAC 15 8143965 0.847275386 3 14 140 0.933333333 1.146128036 0.533333333 0 0 15 1 0 14 X:8143932-8143982 7 CG2263 FBtr0071190 8143902 8143998 TGCATTT 7mer-m8 dme-miR-277-3p X - 8143932 8143981 3'utr CG2263 FlyBase G49455.1 AGGACCTGCGATCAAATTGCATTTTTTTTCACACATGAATGTTCCAAAAC 5 8143965 0.984478007 3 5 39 1 0.84509804 0 0.4 0.571428571 5 0 0 7 X:8143932-8143981 7 8.5 4576 FBgn0030007 507.0733333 36.52333333 55.98333333 0.016762861 0.232727936 0.151830902 1 1 1 0.15 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 8154902 8154907 - X_8154902_8154907_- 0.999999369 0.999993371 0.99999637 4.24E-06 Traf6 FBtr0071188 8154597 8155833 X - 8154889 8154953 3'utr Traf6 FlyBase G65698.1 AAAACTAGTAATGAGTGAACCGACCAGCGCATAGAATATAAAATATGTACCTTTTTTGAAAACAA 23 8154900 0.849004415 8 22 190 0.961538462 1.096910013 0.038461538 0.086956522 0.192307692 23 0 1 25 X:8154889-8154953 6 Traf6 FBtr0071188 8154597 8155833 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X - 8154893 8154952 3'utr Traf6 FlyBase G49467.1 AAACTAGTAATGAGTGAACCGACCAGCGCATAGAATATAAAATATGTACCTTTTTTGAAA 25 8154908 0.89132802 5 24 199 0.96969697 1.505149978 0.212121212 0.2 0.393939394 25 1 0 32 X:8154893-8154952 6 18.5 4577 FBgn0265464 124.9866667 5.45 8.333333333 0.148015788 3.394495413 2.22 -7 1 -3 0.15 dme-miR-2a-2-5p 6mer3-8 TGATGA X 8155326 8155331 - X_8155326_8155331_- 0.748388474 0.671124864 0.709756669 0.054633615 Traf6 FBtr0071188 8154597 8155833 X - 8155267 8155348 3'utr Traf6 FlyBase G65700.1 ATCACATTAAGCAATCTTGATGATATTCAAATACTAATCGATATTAGCCTAGTATCCTAGAACTATCTCTTATTCTCTATTT 19 8155332 0.735306946 9 18 135 0.96 1.380211242 0 0.263157895 0.44 19 1 0 24 X:8155267-8155348 6 Traf6 FBtr0071188 8154597 8155833 TGATGA 6mer3-8 dme-miR-2a-2-5p X - 8155264 8155350 3'utr Traf6 FlyBase G49469.1 GCATCACATTAAGCAATCTTGATGATATTCAAATACTAATCGATATTAGCCTAGTATCCTAGAACTATCTCTTATTCTCTATTTGTA 13 8155330 0.973907883 7 13 106 1 1.230448921 0.176470588 0.307692308 0.470588235 13 0 0 17 X:8155264-8155350 6 9.5 4578 FBgn0265464 124.9866667 5.45 8.333333333 0.076008108 1.743119266 1.14 1 -1 0 0.15 dme-miR-1003-3p 7mer-A1 TGTGAGA X 8158724 8158730 + X_8158724_8158730_+ 0.800594967 0.810435034 0.805515 0.006957931 GIIIspla2 FBtr0303457|FBtr0345987 8158376|8158376 8159017|8159348 X + 8158708 8158750 3'utr GIIIspla2 FlyBase G59745.1 ACTTAGATGAACAGATTGTGAGAGGAGGAGGAGGAGAGACAGC 22 8158723 0.925315658 3 19 65 0.75862069 1.041392685 0.551724138 0.181818182 0.379310345 22 6 1 22 X:8158708-8158750 7 GIIIspla2 FBtr0345987|FBtr0303457 8158376|8158376 8159348|8159017 TGTGAGA 7mer-A1 dme-miR-1003-3p X + 8158690 8158750 3'utr GIIIspla2 FlyBase G45170.1 AACACCATCATCATCCGTACTTAGATGAACAGATTGTGAGAGGAGGAGGAGGAGAGACAGC 16 8158723 0.903345565 4 14 45 0.935483871 1.462397998 0.451612903 0.6875 0.838709677 16 2 0 29 X:8158690-8158750 7 18 4579 FBgn0030013 187 19.04 29.33333333 0.096256684 0.945378151 0.613636364 1 1 1 0.15 dme-miR-276a-3p 7mer-A1 GTTCCTA X 8171293 8171299 - X_8171293_8171299_- 0.569118837 0.694557135 0.631837986 0.088698273 slpr FBtr0303842|FBtr0303843|FBtr0303844|FBtr0071184 8170677|8170227|8170677|8170677 8171581|8171581|8171581|8171581 X - 8171285 8171315 3'utr slpr FlyBase G65706.1 TCATAATAACCGAATTGTTCCTAACGAATGC 12 8171300 0.694288973 3 11 65 0.933333333 1.146128036 0 0.166666667 0.333333333 12 1 0 14 X:8171285-8171315 7 slpr FBtr0303842|FBtr0303843|FBtr0303844|FBtr0071184 8170677|8170227|8170677|8170677 8171581|8171581|8171581|8171581 GTTCCTA 7mer-A1 dme-miR-276a-3p X - 8171274 8171313 3'utr slpr FlyBase G49473.1 ATAATAACCGAATTGTTCCTAACGAATGCAATATGTTGTG 10 8171300 0.963992488 4 10 53 1 1.204119983 0 0.4 0.625 10 0 0 16 X:8171274-8171313 7 11 4580 FBgn0030018 811.23 18.14 27.89 0.013559656 0.606394708 0.394406597 1 1 1 0.15 dme-miR-980-3p 7mer-m8 GGCAGCT X 8239111 8239117 + X_8239111_8239117_+ 0.658605543 0.658633025 0.658619284 1.94E-05 sdt FBtr0100376|FBtr0089975|FBtr0089978|FBtr0340141|FBtr0333720|FBtr0333721|FBtr0308218|FBtr0308219|FBtr0340142|FBtr0308217|FBtr0111034|FBtr0100375|FBtr0308220|FBtr0089974 8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445 8239427|8239427|8240474|8239427|8240474|8239427|8239427|8239427|8240474|8239427|8239427|8239427|8239427|8240474 X + 8239073 8239130 3'utr sdt FlyBase G59752.1 AGCGACTCCGAATGTTAACAGAGCCAGAACAATCCGTAGGCAGCTGTGCGAGGGGAGA 11 8239109 0.899253583 2 11 33 1 1.041392685 0.636363636 0 0 11 0 0 11 X:8239073-8239130 7 sdt FBtr0308220|FBtr0089974|FBtr0111034|FBtr0100375|FBtr0308219|FBtr0089975|FBtr0308217|FBtr0333720|FBtr0100376|FBtr0089978|FBtr0308218|FBtr0340141|FBtr0333721|FBtr0340142 8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445 8239427|8240474|8239427|8239427|8239427|8239427|8239427|8240474|8239427|8240474|8239427|8239427|8239427|8240474 GGCAGCT 7mer-m8 dme-miR-980-3p X + 8239092 8239144 3'utr sdt FlyBase G45177.1 AGAGCCAGAACAATCCGTAGGCAGCTGTGCGAGGGGAGATCGATCCGTCGGAT 7 8239109 0.923354171 3 7 24 1 1.113943352 0.615384615 0.714285714 0.846153846 7 0 0 13 X:8239092-8239144 7 8 4581 FBgn0261873 288.2033333 5.556666667 8.47 0.02775818 1.439712058 0.944510035 2 2 2 0.15 dme-miR-307a-3p 6mer3-8 GGTTGT X 8247766 8247771 + X_8247766_8247771_+ 0.85723631 0.871521376 0.864378843 0.010101091 Trxr-1 FBtr0071169|FBtr0071168|FBtr0071167 8247693|8247693|8247693 8248033|8248033|8248033 X + 8247716 8247834 3'utr Trxr-1 FlyBase G59769.1 CCTGGGACGTGTCGAAGCCGCTTGCTCCACCCGAAATCCCGTAGATGAATGGTTGTTGTCGCGGCCCAGCGATCGATGAGTTCAATAGTTCCGTTTCGTTTCCACAATTAACACCCAAC 17 8247765 0.980764245 7 17 120 1 1.301029996 0.4 0.117647059 0.25 17 0 0 20 X:8247716-8247834 6 Trxr-1 FBtr0071168|FBtr0071167|FBtr0071169 8247693|8247693|8247693 8248033|8248033|8248033 GGTTGT 6mer3-8 dme-miR-307a-3p X + 8247725 8247785 3'utr Trxr-1 FlyBase G45191.1 TGTCGAAGCCGCTTGCTCCACCCGAAATCCCGTAGATGAATGGTTGTTGTCGCGGCCCAGC 6 8247765 0.975074542 2 6 35 1 0.903089987 0.25 0.333333333 0.5 6 0 0 8 X:8247725-8247785 6 6.5 4582 FBgn0020653 1519.943333 86.74333333 132.1866667 0.004276475 0.074933712 0.049172887 1 1 1 0.15 dme-miR-282-5p 6mer2-7 GAGGCT X 8275823 8275828 + X_8275823_8275828_+ 0.993676168 0.967860718 0.980768443 0.018254315 CG1636 FBtr0339833|FBtr0071171 8275361|8275361 8276450|8276201 X + 8275771 8275856 3'utr CG1636 FlyBase G59775.1 AAATCAAACGTGCAGATAATCTCAAAGGCTATATACGCAAAAATCGAAAAGTGAGGCTTACAAAATTAATCTCCTAGAAGTATTTA 63 8275822 0.933545604 7 60 289 0.957746479 1.531478917 0.056338028 0.095238095 0.197183099 63 2 1 68 X:8275771-8275856 6 CG1636 FBtr0339833|FBtr0071171 8275361|8275361 8276450|8276201 GAGGCT 6mer2-7 dme-miR-282-5p X + 8275775 8275855 3'utr CG1636 FlyBase G45196.1 CAAACGTGCAGATAATCTCAAAGGCTATATACGCAAAAATCGAAAAGTGAGGCTTACAAAATTAATCTCCTAGAAGTATTT 45 8275822 0.948411095 5 45 180 1 1.819543936 0.090909091 0.422222222 0.606060606 45 0 0 66 X:8275775-8275855 6 41 4583 FBgn0030030 151.2133333 8.68 13.2 0.271140111 4.723502304 3.106060606 1 1 1 0.15 dme-miR-2b-2-5p 6mer2-7 TGAAGA X 8402963 8402968 + X_8402963_8402968_+ 0.71689891 0.704523065 0.710710987 0.008751012 CG10555 FBtr0071174|FBtr0343353 8402563|8402563 8403942|8404516 X + 8402905 8402989 3'utr CG10555 FlyBase G59783.1 GAAGACGGACGAGTAAGCATAAGACTTAAAGTAGGCGAAAAGAACGACGAATGAGAAATGAAGACGAGATGGAAATTCAGGATTC 355 8402963 0.971952485 5 351 794 0.988179669 2.320146286 0.444444444 0.154929577 0.290780142 355 4 1 418 X:8402905-8402989 6 CG10555 FBtr0343353|FBtr0071174 8402563|8402563 8404516|8403942 TGAAGA 6mer2-7 dme-miR-2b-2-5p X + 8402910 8402986 3'utr CG10555 FlyBase G45199.1 CGGACGAGTAAGCATAAGACTTAAAGTAGGCGAAAAGAACGACGAATGAGAAATGAAGACGAGATGGAAATTCAGGA 173 8402963 0.979528508 6 171 361 0.992217899 2.105510185 0.459143969 0.358381503 0.568093385 173 1 1 255 X:8402910-8402986 6 254.5 4584 FBgn0030034 842.1066667 21.32333333 32.79333333 0.302218246 11.93528216 7.760723724 0 0 0 0.15 dme-miR-995-5p 7mer-m8 AATTCGG X 8403060 8403066 + X_8403060_8403066_+ 0.671662026 0.671451045 0.671556536 0.0001492 CG10555 FBtr0071174|FBtr0343353 8402563|8402563 8403942|8404516 X + 8402999 8403093 3'utr CG10555 FlyBase G59784.1 AGCAGCGAATTCCTCGAATTTCGAACTGAACTGTACGAAAGTTGCAGGCAGTTTTTTTTTAAATTCGGTGATAAATAGCAGAAGCAAGTAGCAGG 34 8403062 0.819490487 10 32 242 0.975 1.591064607 0.4 0.117647059 0.25 34 1 0 39 X:8402999-8403093 7 CG10555 FBtr0343353|FBtr0071174 8402563|8402563 8404516|8403942 AATTCGG 7mer-m8 dme-miR-995-5p X + 8403053 8403083 3'utr CG10555 FlyBase G45200.1 TTTTTTAAATTCGGTGATAAATAGCAGAAGC 11 8403062 0.767484927 2 10 71 0.933333333 1.146128036 0.533333333 0.363636364 0.533333333 11 1 0 14 X:8403053-8403083 7 17 4585 FBgn0030034 842.1066667 21.32333333 32.79333333 0.020187466 0.79724871 0.518398048 -2 -2 -2 0.15 dme-miR-1008-3p 6mer2-7 GCTGTG X 8408015 8408020 - X_8408015_8408020_- 0.971661083 0.761417352 0.866539218 0.148664746 lawc FBtr0071248|FBtr0302081|FBtr0307287|FBtr0307286 8408006|8408006|8408006|8408006 8409752|8409752|8409752|8409752 X - 8408008 8408041 3'utr lawc FlyBase G65738.1 TATACATAATAATAAATGATCGCTGTGTTTATGC 13 8408022 0.808062838 4 12 104 0.944444444 1.230448921 0 0.307692308 0.5 13 1 0 17 X:8408008-8408041 6 lawc FBtr0071248|FBtr0302081|FBtr0307287|FBtr0307286 8408006|8408006|8408006|8408006 8409752|8409752|8409752|8409752 GCTGTG 6mer2-7 dme-miR-1008-3p X - 8408008 8408041 3'utr lawc FlyBase G49498.1 TATACATAATAATAAATGATCGCTGTGTTTATGC 15 8408014 0.622255502 6 13 120 0.869565217 1.301029996 0 0.4 0.608695652 15 3 0 20 X:8408008-8408041 6 14 4586 FBgn0262976 211.98 11.61333333 17.8 0.066043966 1.205510907 0.786516854 2 -6 -2 0.15 dme-miR-14-3p 7mer-m8 AAGACTG X 8408092 8408098 - X_8408092_8408098_- 0.545187624 0.4303056 0.487746612 0.081233841 lawc FBtr0071248|FBtr0302081|FBtr0307287|FBtr0307286 8408006|8408006|8408006|8408006 8409752|8409752|8409752|8409752 X - 8408069 8408308 3'utr lawc FlyBase G65739.1 AATAATTTCAAGGAGAAGATGTTTTTGTGGTCAAAAACGTGCAGATGACTTCTAAGAAGTTGGAAAATCATGTATTTACTCGGAAAGAAGCCAGAACTGAAGTAGCATACTTATTAGTATTATCAAATGATGAGTTTTTTCATCATAGTTTTAGTTCTATATTTATAGAAAAAAAAAACTTTCCTTGTTACTTTTAGTTTTTTCATTTGAAAGACTGCCGTTGACTTTTTCATTTTATTC 59 8408103 0.982688276 23 56 436 0.938461538 1.785329835 0.092307692 0.101694915 0.184615385 59 4 0 61 X:8408069-8408308 7 lawc FBtr0071248|FBtr0302081|FBtr0307287|FBtr0307286 8408006|8408006|8408006|8408006 8409752|8409752|8409752|8409752 AAGACTG 7mer-m8 dme-miR-14-3p X - 8408078 8408146 3'utr lawc FlyBase G49499.1 TTATAGAAAAAAAAAACTTTCCTTGTTACTTTTAGTTTTTTCATTTGAAAGACTGCCGTTGACTTTTTC 30 8408103 0.728668305 14 29 265 0.979591837 1.681241237 0.040816327 0.466666667 0.673469388 30 1 0 48 X:8408078-8408146 7 27 4587 FBgn0262976 211.98 11.61333333 17.8 0.127370507 2.324913892 1.516853933 5 5 5 0.15 dme-miR-263a-5p 6mer3-8 GTGCCA X 8429129 8429134 + X_8429129_8429134_+ 0.999199035 0.999999566 0.9995993 0.00056611 Trf2 FBtr0300577|FBtr0330106|FBtr0333811|FBtr0330105|FBtr0112927|FBtr0333750 8429114|8429114|8429114|8429114|8429114|8429114 8433011|8433011|8430195|8430195|8430195|8430195 X + 8429030 8429141 stop_codon Trf2 FlyBase G59811.1 AACAGACCAGCTTCTCGCCCAGCGAATTCGATGTTGATGACTTGATCGAGGAGGAGGAGAACAACGAATTGGATATGCCCTTCTAAGCTAGCGCTGCCCGTGCCAAAAAAAA 13 8429129 0.952630486 10 13 62 1 1.146128036 0.142857143 0.076923077 0.142857143 13 0 0 14 X:8429030-8429141 6 Trf2 FBtr0112927|FBtr0333750|FBtr0300577|FBtr0330106|FBtr0333811|FBtr0330105 8429114|8429114|8429114|8429114|8429114|8429114 8430195|8430195|8433011|8433011|8430195|8430195 GTGCCA 6mer3-8 dme-miR-263a-5p X + 8429097 8429144 stop_codon Trf2 FlyBase G45213.1 ATTGGATATGCCCTTCTAAGCTAGCGCTGCCCGTGCCAAAAAAAAATT 6 8429127 0.906291225 3 5 22 1 0.954242509 0 0.8 0.888888889 5 0 0 9 X:8429097-8429144 6 5.5 4588 FBgn0261793 2407.63 30.94 47.70333333 0.002284404 0.177763413 0.115295926 0 2 1 0.15 dme-miR-2b-2-5p 7mer-A1 TGAAGAA X 8429966 8429972 + X_8429966_8429972_+ 0.823349562 0.80910943 0.816229496 0.010069342 Trf2 FBtr0300577|FBtr0330106|FBtr0333811|FBtr0330105|FBtr0112927|FBtr0333750 8429114|8429114|8429114|8429114|8429114|8429114 8433011|8433011|8430195|8430195|8430195|8430195 X + 8429909 8429988 3'utr Trf2 FlyBase G59818.1 ATCCGTGGAGAGGAGGTGGGGCCAGAGAAAAGCCCACTAGGATAGTTATCAATTATCTGAAGAACAACTGATTAATTTCT 20 8429980 0.97368226 10 18 102 0.928571429 1.414973348 0.071428571 0.3 0.5 20 2 0 26 X:8429909-8429988 7 Trf2 FBtr0112927|FBtr0333750|FBtr0300577|FBtr0330106|FBtr0333811|FBtr0330105 8429114|8429114|8429114|8429114|8429114|8429114 8430195|8430195|8433011|8433011|8430195|8430195 TGAAGAA 7mer-A1 dme-miR-2b-2-5p X + 8429952 8429985 3'utr Trf2 FlyBase G45218.1 AGTTATCAATTATCTGAAGAACAACTGATTAATT 9 8429980 0.647813594 4 9 48 1 1.204119983 0 0.666666667 0.8125 9 0 0 16 X:8429952-8429985 7 11 4589 FBgn0261793 2407.63 30.94 47.70333333 0.004568808 0.355526826 0.230591852 -14 -14 -14 0.15 dme-miR-276a-3p 6mer2-7 GTTCCT X 8430443 8430448 + X_8430443_8430448_+ 0.964633636 0.98215061 0.973392123 0.012386389 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 X + 8430418 8430462 3'utr Trf2 FlyBase G59822.1 CGCTTAAGTGTAGATTTACAAACTTGTTCCTGTGTTGTTAAAATC 189 8430443 0.745467116 12 184 2059 0.976851852 1.625312451 0.162037037 0.121693122 0.231481481 189 1 4 211 X:8430418-8430462 6 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 GTTCCT 6mer2-7 dme-miR-276a-3p X + 8430419 8430466 3'utr Trf2 FlyBase G45223.1 GCTTAAGTGTAGATTTACAAACTTGTTCCTGTGTTGTTAAAATCAGAA 121 8430442 0.76049186 9 115 1286 0.947916667 1.561101384 0.135416667 0.41322314 0.630208333 121 6 4 182 X:8430419-8430466 6 153.5 4590 FBgn0261793 2407.63 30.94 47.70333333 0.063755644 4.961215255 3.217804486 0 1 0.5 0.15 dme-miR-14-3p 7mer-m8 AAGACTG X 8431992 8431998 + X_8431992_8431998_+ 0.671356121 0.670806483 0.671081302 0.000388626 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 X + 8431959 8432106 3'utr Trf2 FlyBase G59829.1 CAAATAGCATAATTCTGTTTTTGTTTTGCCGTAAAGACTGCATTATACCAACAATTAATTATATACAAACATAATAAATAATTAACTGATAAATGGGGCGAGTAAGCTTTGCAACTAAGCTGAGAACAAAACGGATGGATAAACATTT 73 8432001 0.981840352 17 71 510 0.965116279 1.919078092 0.023255814 0.164383562 0.290697674 73 3 0 83 X:8431959-8432106 7 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 AAGACTG 7mer-m8 dme-miR-14-3p X + 8431961 8432014 3'utr Trf2 FlyBase G45229.1 AATAGCATAATTCTGTTTTTGTTTTGCCGTAAAGACTGCATTATACCAACAATT 42 8432001 0.970298474 12 41 314 0.982758621 1.755874856 0 0.30952381 0.5 42 1 0 57 X:8431961-8432014 7 51 4591 FBgn0261793 2407.63 30.94 47.70333333 0.021182657 1.648351648 1.069107679 -9 -9 -9 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 8432299 8432304 + X_8432299_8432304_+ 0.982661166 0.934099354 0.95838026 0.034338378 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 X + 8432277 8432319 3'utr Trf2 FlyBase G59831.1 AAAAGCAAGATGAAATTACCTTACCAAAATGTGCTAGCCCTCG 5 8432293 0.886551134 3 5 27 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 X:8432277-8432319 6 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 8432274 8432320 3'utr Trf2 FlyBase G45230.1 ACGAAAAGCAAGATGAAATTACCTTACCAAAATGTGCTAGCCCTCGA 6 8432306 0.973596674 3 6 38 1 0.903089987 0.375 0.333333333 0.5 6 0 0 8 X:8432274-8432320 6 5.5 4592 FBgn0261793 2407.63 30.94 47.70333333 0.002284404 0.177763413 0.115295926 6 -7 -0.5 0.15 dme-miR-277-3p 6mer3-8 TGCATT X 8441353 8441358 - X_8441353_8441358_- 0.999839732 0.999935086 0.999887409 6.75E-05 CG12123 FBtr0071245 8441245 8441410 X - 8441336 8441371 3'utr CG12123 FlyBase G65747.1 AAAAATTGTAAATTGCATTAGGTGGTCACGATTCGA 5 8441355 0.878273102 4 5 30 1 0.84509804 0.142857143 0.4 0.571428571 5 0 0 7 X:8441336-8441371 6 CG12123 FBtr0071245 8441245 8441410 TGCATT 6mer3-8 dme-miR-277-3p X - 8441341 8441370 3'utr CG12123 FlyBase G49507.1 AAAATTGTAAATTGCATTAGGTGGTCACGA 7 8441358 0.681940397 4 6 47 0.916666667 1.041392685 0 0.571428571 0.75 7 1 0 11 X:8441341-8441370 6 6 4593 FBgn0030039 53.33333333 6.263333333 9.543333333 0.1125 0.95795636 0.628711142 -3 0 -1.5 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 8448086 8448092 - X_8448086_8448092_- 0.81962691 0.82266996 0.821148435 0.002151797 org-1 FBtr0345983|FBtr0071244 8447689|8447839 8448232|8448232 X - 8448064 8448106 3'utr org-1 FlyBase G65752.1 GTGTAAATCTCATGCCAAAGATTCGTTCTAAAATCAAGAATCT 11 8448094 0.944310903 2 9 79 0.833333333 1 0.25 0.090909091 0.166666667 11 2 0 10 X:8448064-8448106 7 org-1 FBtr0071244|FBtr0345983 8447839|8447689 8448232|8448232 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X - 8448074 8448108 3'utr org-1 FlyBase G49509.1 ATGTGTAAATCTCATGCCAAAGATTCGTTCTAAAA 8 8448094 0.854662071 2 7 47 0.916666667 1.041392685 0.166666667 0.5 0.666666667 8 1 0 11 X:8448074-8448108 7 9.5 4594 FBgn0021767 5 0.183333333 0.283333333 1.9 51.81818182 33.52941176 2 2 2 0.15 dme-miR-308-3p 7mer-m1 TGTGATT X 8555389 8555395 - X_8555389_8555395_- 0.391002995 0.443128122 0.417065558 0.036858012 IntS4 FBtr0071234 8555237 8555552 X - 8555366 8555421 3'utr IntS4 FlyBase G65758.2 GAGCAACTGTTATTTAAATATATGTATGTGATTGTTTAAGATACCATAGCAGTTGG 18 8555389 0.713278724 6 16 143 1 1.361727836 0.304347826 0.222222222 0.391304348 18 0 0 23 X:8555366-8555421 7 IntS4 FBtr0071234 8555237 8555552 TGTGATT 7mer-m1 dme-miR-308-3p X - 8555358 8555406 3'utr IntS4 FlyBase G49512.1 AAATATATGTATGTGATTGTTTAAGATACCATAGCAGTTGGTTGCCAAA 12 8555390 0.988335515 7 11 101 0.944444444 1.230448921 0 0.416666667 0.611111111 12 1 0 17 X:8555358-8555406 7 11.5 4595 FBgn0026679 250.3333333 8.63 13.06666667 0.045938748 1.332560834 0.880102041 -6 -5 -5.5 0.15 "dme-miR-995-3p,dme-miR-998-3p" 6mer2-7 GGTGCT X 8555524 8555529 - X_8555524_8555529_- 0.861082241 0.933073025 0.897077633 0.050905183 IntS4 FBtr0071234 8555237 8555552 X - 8555507 8555555 stop_codon IntS4 FlyBase G65759.1 TAGCCTGACTTCCAGGTAATGGACTAGGTGCTTTTTGTCCTGGCGACGC 9 8555536 0.822942665 3 9 69 1 0.954242509 0 0 0 9 0 0 9 X:8555507-8555555 6 IntS4 FBtr0071234 8555237 8555552 GGTGCT 6mer2-7 "dme-miR-995-3p,dme-miR-998-3p" X - 8555498 8555547 3'utr IntS4 FlyBase G49513.1 CTTCCAGGTAATGGACTAGGTGCTTTTTGTCCTGGCGACGCGGAGCGAGA 12 8555536 0.977001814 5 12 78 1 1.278753601 0.052631579 0.333333333 0.578947368 12 0 0 19 X:8555498-8555547 6 9.5 4596 FBgn0026679 250.3333333 8.63 13.06666667 0.037949401 1.100811124 0.727040816 7 7 7 0.15 dme-miR-283-5p 8mer-A1 TGATATTA X 8558901 8558908 - X_8558901_8558908_- 0.592189744 0.592192292 0.592191018 1.84E-06 CG12112 FBtr0071233|FBtr0331727 8558877|8558877 8559220|8559220 X - 8558884 8558930 3'utr CG12112 FlyBase G65765.1 AATATAATTATTAAATGCCTGGTGATATTAGCATTATCACTCTTGTG 42 8558903 0.646701988 7 40 325 0.945454545 1.716003344 0.018181818 0.261904762 0.436363636 42 3 0 52 X:8558884-8558930 8 CG12112 FBtr0331727|FBtr0071233 8558877|8558877 8559220|8559220 TGATATTA 8mer-A1 dme-miR-283-5p X - 8558883 8558935 3'utr CG12112 FlyBase G49515.1 AAAATAATATAATTATTAAATGCCTGGTGATATTAGCATTATCACTCTTGTGA 28 8558902 0.662221473 8 27 228 1 1.602059991 0 0.285714286 0.5 28 0 0 40 X:8558883-8558935 8 34.5 4597 FBgn0030048 960.5366667 106.9333333 163.9633333 0.035917421 0.322630923 0.210412897 -5 -6 -5.5 0.15 dme-miR-263a-5p 7mer-A1 TGCCATA X 8567613 8567619 + X_8567613_8567619_+ 0.782103979 0.782806404 0.782455191 0.000496672 Trf4-1 FBtr0112964|FBtr0331725 8566937|8566937 8570159|8570159 X + 8567583 8567624 3'utr Trf4-1 FlyBase G59860.1 CGTAACTAATTCCCTATCCACCCCATTTCCTGCCATACAAAA 24 8567609 0.722021287 3 24 138 1 1.531478917 0 0.375 0.558823529 24 0 0 34 X:8567583-8567624 7 Trf4-1 FBtr0331725|FBtr0112964 8566937|8566937 8570159|8570159 TGCCATA 7mer-A1 dme-miR-263a-5p X + 8567581 8567631 3'utr Trf4-1 FlyBase G45249.1 AACGTAACTAATTCCCTATCCACCCCATTTCCTGCCATACAAAAAAAAAAA 13 8567609 0.964592749 4 13 68 1 1.255272505 0 0.307692308 0.5 13 0 0 18 X:8567581-8567631 7 17.5 4598 FBgn0030049 670.8133333 17.65 27.06666667 0.026087734 0.991501416 0.646551724 4 4 4 0.15 dme-miR-980-5p 7mer-m1 AAAAACT X 8567795 8567801 + X_8567795_8567801_+ 0.765565836 0.765423081 0.765494458 0.000100904 Trf4-1 FBtr0112964|FBtr0331725 8566937|8566937 8570159|8570159 X + 8567771 8567808 3'utr Trf4-1 FlyBase G59861.1 TGCGCAATGACCCTTGTAACTTCCAAAAACTCGTTTAA 10 8567789 0.651641957 4 10 61 1 1 0.1 0 0 10 0 0 10 X:8567771-8567808 7 Trf4-1 FBtr0331725|FBtr0112964 8566937|8566937 8570159|8570159 AAAAACT 7mer-m1 dme-miR-980-5p X + 8567777 8567804 3'utr Trf4-1 FlyBase G45250.1 ATGACCCTTGTAACTTCCAAAAACTCGT 6 8567789 0.654332315 2 6 32 1 1.041392685 0 0.833333333 0.909090909 6 0 0 11 X:8567777-8567804 7 8 4599 FBgn0030049 670.8133333 17.65 27.06666667 0.011925821 0.45325779 0.295566502 6 6 6 0.15 dme-miR-317-3p 6mer3-8 TGTGTT X 8567994 8567999 + X_8567994_8567999_+ 0.99832072 0.999965169 0.999142944 0.001162837 Trf4-1 FBtr0112964|FBtr0331725 8566937|8566937 8570159|8570159 X + 8567927 8568013 3'utr Trf4-1 FlyBase G59863.1 AATTAAGGTAAAAAAAATTGTGAGCCTACTTAAATTGTTCGAACACATTGTCCAACCCCAAAGCAATTGTGTTTTAAAGCTAAAACA 32 8567993 0.85903393 10 32 186 1 1.556302501 0.055555556 0.125 0.222222222 32 0 0 36 X:8567927-8568013 6 Trf4-1 FBtr0331725|FBtr0112964 8566937|8566937 8570159|8570159 TGTGTT 6mer3-8 dme-miR-317-3p X + 8567923 8568011 3'utr Trf4-1 FlyBase G45252.1 TTATAATTAAGGTAAAAAAAATTGTGAGCCTACTTAAATTGTTCGAACACATTGTCCAACCCCAAAGCAATTGTGTTTTAAAGCTAAAA 20 8567994 0.950491038 7 18 119 0.923076923 1.380211242 0.384615385 0.25 0.423076923 20 2 0 24 X:8567923-8568011 6 13.5 4600 FBgn0030049 670.8133333 17.65 27.06666667 0.020124824 0.764872521 0.498768473 1 0 0.5 0.15 dme-miR-263a-5p 7mer-m1 TGCCATT X 8568162 8568168 + X_8568162_8568168_+ 0.764427454 0.76454359 0.764485522 8.21E-05 Trf4-1 FBtr0112964|FBtr0331725 8566937|8566937 8570159|8570159 X + 8568139 8568183 3'utr Trf4-1 FlyBase G59864.1 GTTGTGCATTTTGCATAGATTCCTGCCATTTGTTTGTATAGTTGT 137 8568158 0.835097401 4 134 1343 0.988636364 2.240549248 0.477272727 0.240875912 0.409090909 137 2 0 174 X:8568139-8568183 7 Trf4-1 FBtr0331725|FBtr0112964 8566937|8566937 8570159|8570159 TGCCATT 7mer-m1 dme-miR-263a-5p X + 8568138 8568187 3'utr Trf4-1 FlyBase G45253.1 TGTTGTGCATTTTGCATAGATTCCTGCCATTTGTTTGTATAGTTGTTCAC 83 8568158 0.830157771 4 82 791 0.992248062 2.10720997 0.457364341 0.385542169 0.604651163 83 1 0 128 X:8568138-8568187 7 109.5 4601 FBgn0030049 670.8133333 17.65 27.06666667 0.16323468 6.203966006 4.045566502 4 4 4 0.15 dme-bantam-3p 7mer-m8 TGATCTC X 8591045 8591051 - X_8591045_8591051_- 0.396903008 0.548713693 0.472808351 0.107346375 CG12659 FBtr0332627 8590773 8591302 X - 8590979 8591089 3'utr CG12659 FlyBase G65774.1 ATATATATATATATATGCATACACTGCCTAAAAGGAGATGATCTCTGTAAATTAGTTATAGAGATTTGTCACTAGTTTGACCGCAAAAATAGATTAGGTAATTCCAAGGTG 54 8591051 0.985209668 9 52 420 0.966666667 1.286306739 0.05 0.092592593 0.183333333 54 0 2 58 X:8590979-8591089 7 CG12659 FBtr0332627 8590773 8591302 TGATCTC 7mer-m8 dme-bantam-3p X - 8591024 8591095 3'utr CG12659 FlyBase G49523.1 ATTACCATATATATATATATATGCATACACTGCCTAAAAGGAGATGATCTCTGTAAATTAGTTATAGAGATT 32 8591044 0.793825522 9 30 240 0.906976744 1.591064607 0.046511628 0.15625 0.372093023 32 4 0 39 X:8591024-8591095 7 17.5 4602 FBgn0040929 86.03333333 12.17 18.70333333 0.203409531 1.437962202 0.935662092 0 -7 -3.5 0.15 dme-miR-34-5p 7mer-m8 CACTGCC X 8591062 8591068 - X_8591062_8591068_- 0.680419884 0.658673815 0.66954685 0.015376815 CG12659 FBtr0332627 8590773 8591302 X - 8590979 8591089 3'utr CG12659 FlyBase G65774.1 ATATATATATATATATGCATACACTGCCTAAAAGGAGATGATCTCTGTAAATTAGTTATAGAGATTTGTCACTAGTTTGACCGCAAAAATAGATTAGGTAATTCCAAGGTG 54 8591051 0.985209668 9 52 420 0.966666667 1.286306739 0.05 0.092592593 0.183333333 54 0 2 58 X:8590979-8591089 7 CG12659 FBtr0332627 8590773 8591302 CACTGCC 7mer-m8 dme-miR-34-5p X - 8591024 8591095 3'utr CG12659 FlyBase G49523.1 ATTACCATATATATATATATATGCATACACTGCCTAAAAGGAGATGATCTCTGTAAATTAGTTATAGAGATT 32 8591044 0.793825522 9 30 240 0.906976744 1.591064607 0.046511628 0.15625 0.372093023 32 4 0 39 X:8591024-8591095 7 13.5 4603 FBgn0040929 86.03333333 12.17 18.70333333 0.156915924 1.109285127 0.721796471 -17 -24 -20.5 0.15 dme-bantam-3p 6mer3-8 TGATCT X 8601159 8601164 + X_8601159_8601164_+ 0.999277913 0.999993015 0.999635464 0.000505652 Crag FBtr0343356|FBtr0071219|FBtr0071220 8600627|8600627|8600627 8602036|8601231|8601231 X + 8601145 8601192 3'utr Crag FlyBase G59913.1 TTTTGTAAATGACTTGATCTTAACATTTAAGTACTTAACGATTTTTCG 14 8601161 0.986132383 6 12 123 0.894736842 1.230448921 0.052631579 0.357142857 0.526315789 14 2 0 17 X:8601145-8601192 6 Crag FBtr0343356|FBtr0071219|FBtr0071220 8600627|8600627|8600627 8602036|8601231|8601231 TGATCT 6mer3-8 dme-bantam-3p X + 8601083 8601177 3'utr Crag FlyBase G45290.1 CGAACTTTCCTAAGTGAAAGCCCCAACTTGACATGTGTTGCATTGTGAAAACATGCAAATGATTTTGTAAATGACTTGATCTTAACATTTAAGTA 12 8601159 0.986541982 9 12 92 1 1.255272505 0.055555556 0.333333333 0.555555556 12 0 0 18 X:8601083-8601177 6 9 4604 FBgn0025864 2284.02 39.50333333 60.84 0.003940421 0.227828875 0.147928994 -2 0 -1 0.15 dme-miR-305-3p 6mer3-8 ATGTGC X 8601554 8601559 + X_8601554_8601559_+ 0.955340198 0.986877582 0.97110889 0.022300309 Crag FBtr0343356 8600627 8602036 X + 8601515 8601575 3'utr Crag FlyBase G59915.1 ATAATATAACGATACATATTCGTGTACATACAAAGCTATATGTGCGATCCTGTAAATCAGC 10 8601555 0.97910455 2 10 74 1 1.113943352 0.538461538 0.3 0.461538462 10 0 0 13 X:8601515-8601575 6 Crag FBtr0343356 8600627 8602036 ATGTGC 6mer3-8 dme-miR-305-3p X + 8601542 8601579 3'utr Crag FlyBase G45291.1 ATACAAAGCTATATGTGCGATCCTGTAAATCAGCATTG 8 8601555 0.960105042 3 8 50 1 0.954242509 0.333333333 0.125 0.222222222 8 0 0 9 X:8601542-8601579 6 8.5 4605 FBgn0025864 2284.02 39.50333333 60.84 0.003721509 0.215171715 0.139710717 -1 -1 -1 0.15 dme-miR-2a-2-5p 6mer3-8 TGATGA X 8602193 8602198 - X_8602193_8602198_- 0.666547101 0.665837499 0.6661923 0.000501763 Caf1-180 FBtr0071228 8602135 8602511 X - 8602168 8602223 3'utr Caf1-180 FlyBase G65777.1 ATGCAATAATACACTACCTACCTGATGATGATCTTTCATTTGATGGCGATTTTGGG 18 8602198 0.976497014 5 17 114 0.958333333 1.361727836 0 0.277777778 0.458333333 18 1 0 23 X:8602168-8602223 6 Caf1-180 FBtr0071228 8602135 8602511 TGATGA 6mer3-8 dme-miR-2a-2-5p X - 8602185 8602219 3'utr Caf1-180 FlyBase G49526.1 AATAATACACTACCTACCTGATGATGATCTTTCAT 10 8602197 0.782452257 3 10 61 1 1.113943352 0 0.3 0.461538462 10 0 0 13 X:8602185-8602219 6 12 4606 FBgn0030054 1600.7 48.52 75.10666667 0.00749672 0.247320692 0.159772768 0 -1 -0.5 0.15 dme-miR-277-3p 6mer3-8 TGCATT X 8688487 8688492 + X_8688487_8688492_+ 0.999950939 0.922624735 0.961287837 0.05467788 CG11284 FBtr0071222|FBtr0331731|FBtr0331730|FBtr0345984|FBtr0331729 8688176|8688176|8688176|8688176|8688176 8688760|8688760|8688760|8688760|8688760 X + 8688411 8688567 3'utr CG11284 FlyBase G59935.1 TATATATATATATATATACGGAGTATTTACGATACGGATACGTGTATGGAATTTTAGTCGGAGCACGCGGTTGCCTTGCATTGAATATTTCAGAGAAATATCGGGCACAACTACTTAAGACATCTACAAGAGACGTAATCCTAACGTTTAAGTTATT 49 8688482 0.784323103 19 45 307 0.915254237 1.255272505 0.152542373 0.12244898 0.271186441 49 3 2 54 X:8688411-8688567 6 CG11284 FBtr0345984|FBtr0331730|FBtr0331731|FBtr0071222|FBtr0331729 8688176|8688176|8688176|8688176|8688176 8688760|8688760|8688760|8688760|8688760 TGCATT 6mer3-8 dme-miR-277-3p X + 8688411 8688549 3'utr CG11284 FlyBase G45304.1 TATATATATATATATATACGGAGTATTTACGATACGGATACGTGTATGGAATTTTAGTCGGAGCACGCGGTTGCCTTGCATTGAATATTTCAGAGAAATATCGGGCACAACTACTTAAGACATCTACAAGAGACGTAAT 34 8688481 0.819811544 15 30 210 0.916666667 1.166331422 0.291666667 0.264705882 0.479166667 34 2 2 44 X:8688411-8688549 6 17 4607 FBgn0030056 1071.946667 65.25333333 99.50666667 0.015858998 0.260523089 0.170842825 5 6 5.5 0.15 dme-miR-305-5p 7mer-A1 GTACAAA X 8712521 8712527 - X_8712521_8712527_- 0.782418464 0.78176607 0.782092267 0.000461316 CG2004 FBtr0332958|FBtr0071281|FBtr0332960|FBtr0346167|FBtr0332957 8712470|8712470|8712470|8712470|8712470 8712597|8712597|8712597|8712597|8712597 X - 8712500 8712542 3'utr CG2004 FlyBase G65795.1 TGTAACCCATATAATGTACAAAACGTAACTCCAGATAATTAAA 7 8712528 0.945332781 3 7 34 1 0.954242509 0.111111111 0.142857143 0.333333333 7 0 0 9 X:8712500-8712542 7 CG2004 FBtr0332957|FBtr0332960|FBtr0346167|FBtr0332958|FBtr0071281 8712470|8712470|8712470|8712470|8712470 8712597|8712597|8712597|8712597|8712597 GTACAAA 7mer-A1 dme-miR-305-5p X - 8712512 8712539 3'utr CG2004 FlyBase G49537.1 AACCCATATAATGTACAAAACGTAACTC 5 8712528 0.657908897 2 5 20 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 X:8712512-8712539 7 6 4608 FBgn0030060 282.3166667 21.61333333 33.1 0.02125273 0.277606416 0.181268882 1 1 1 0.15 dme-miR-980-5p 6mer2-7 AAAAAC X 8873056 8873061 - X_8873056_8873061_- 0.461544815 0.494985941 0.478265378 0.023646429 Moe FBtr0331601|FBtr0071269|FBtr0308193|FBtr0071274 8873010|8873010|8873010|8873010 8873946|8873946|8873946|8873946 X - 8873008 8873083 3'utr Moe FlyBase G65818.1 AAACAACAAAAAACTATTGTGAAAAAACCAAACAAAAAGTTTTTAAATTAAACAATAAAAATGTAAAACAACAAAA 95 8873067 0.91547082 6 89 294 0.948275862 1.439332694 0 0.168421053 0.318965517 95 3 3 110 X:8873008-8873083 6 Moe FBtr0308193|FBtr0071274|FBtr0331601|FBtr0071269 8873010|8873010|8873010|8873010 8873946|8873946|8873946|8873946 AAAAAC 6mer2-7 dme-miR-980-5p X - 8873031 8873084 3'utr Moe FlyBase G49549.1 CAAACAACAAAAAACTATTGTGAAAAAACCAAACAAAAAGTTTTTAAATTAAAC 65 8873067 0.907669541 3 63 199 0.968421053 1.486666573 0 0.369230769 0.568421053 65 1 2 92 X:8873031-8873084 6 76.5 4609 FBgn0011661 40921.94667 1697.71 2611.596667 0.001869413 0.045060699 0.029292425 6 6 6 0.15 dme-miR-277-3p 7mer-m8 TGCATTT X 8873294 8873300 - X_8873294_8873300_- 0.620175154 0.62015044 0.620162797 1.75E-05 Moe FBtr0331601|FBtr0071269|FBtr0308193|FBtr0071274 8873010|8873010|8873010|8873010 8873946|8873946|8873946|8873946 X - 8873257 8873322 3'utr Moe FlyBase G65821.1 TACAACAAAACAAACAACTATTTGCATTTTCCCCCGTTATAATTATTATTTTTATTATTATATAAT 85 8873301 0.984996478 6 81 669 0.971153846 2.004321374 0 0.188235294 0.336538462 85 3 0 101 X:8873257-8873322 7 Moe FBtr0308193|FBtr0071274|FBtr0331601|FBtr0071269 8873010|8873010|8873010|8873010 8873946|8873946|8873946|8873946 TGCATTT 7mer-m8 dme-miR-277-3p X - 8873276 8873315 3'utr Moe FlyBase G49552.1 AAACAAACAACTATTTGCATTTTCCCCCGTTATAATTATT 50 8873301 0.70646742 4 48 401 0.971428571 1.531478917 0 0.34 0.528571429 50 1 1 68 X:8873276-8873315 7 65.5 4610 FBgn0011661 40921.94667 1697.71 2611.596667 0.001600608 0.038581383 0.025080442 1 1 1 0.15 dme-miR-307a-3p 8mer-A1 GGTTGTGA X 8898980 8898987 - X_8898980_8898987_- 0.67477258 0.674805201 0.67478889 2.31E-05 CG1885 FBtr0333606 8898552 8899226 X - 8898956 8899006 3'utr CG1885 FlyBase G65841.1 GTAGAAAATTTCGAGCTTTGGTTGTGATTCGATTCGATTGATTAGTTATCT 58 8898988 0.708201864 8 57 580 0.986111111 1.851258349 0.277777778 0.206896552 0.361111111 58 1 0 71 X:8898956-8899006 8 CG1885 FBtr0333606 8898552 8899226 GGTTGTGA 8mer-A1 dme-miR-307a-3p X - 8898952 8899007 3'utr CG1885 FlyBase G49569.1 TGTAGAAAATTTCGAGCTTTGGTTGTGATTCGATTCGATTGATTAGTTATCTTTAT 37 8898988 0.960006183 7 35 361 0.9375 1.352182518 0.208333333 0.297297297 0.458333333 37 2 1 45 X:8898952-8899007 8 47 4611 FBgn0030066 139.3333333 11.45 17.55333333 0.337320574 4.104803493 2.677554121 1 1 1 0.15 dme-miR-965-3p 7mer-A1 ACGCTTA X 8903415 8903421 + X_8903415_8903421_+ 0.823178613 0.823136244 0.823157428 3.00E-05 Rbm13 FBtr0346163|FBtr0071255 8903356|8903356 8903761|8903464 X + 8903403 8903441 3'utr Rbm13 FlyBase G59960.1 ACTTAGCTGTTAACGCTTATTGTTTAGCCGGTTAAGAAT 14 8903422 0.655924092 5 13 135 0.944444444 1.230448921 0.333333333 0.214285714 0.388888889 14 1 0 17 X:8903403-8903441 7 Rbm13 FBtr0071255|FBtr0346163 8903356|8903356 8903464|8903761 ACGCTTA 7mer-A1 dme-miR-965-3p X + 8903403 8903439 3'utr Rbm13 FlyBase G45332.1 ACTTAGCTGTTAACGCTTATTGTTTAGCCGGTTAAGA 12 8903423 0.616219647 5 11 110 0.875 1.146128036 0.25 0.25 0.4375 12 2 0 14 X:8903403-8903439 7 12.5 4612 FBgn0030067 1128.99 111.6733333 171.8733333 0.011071843 0.111933616 0.072727978 -7 -8 -7.5 0.15 dme-miR-190-5p 6mer3-8 ACATAT X 8905032 8905037 - X_8905032_8905037_- 0.954789435 0.998478542 0.976633989 0.030892859 e(r) FBtr0071267|FBtr0333604|FBtr0310067|FBtr0071266|FBtr0333605 8904142|8904357|8904357|8904726|8904357 8905063|8905063|8905063|8905063|8905063 X - 8904991 8905063 3'utr e(r) FlyBase G65845.1 AGGGACGGCGATGCGACAAGATACATACATATAAAACCAAATAACACGATGATGCATGCATCAATGCGTGCAA 12 8905041 0.807881405 6 12 42 1 1.079181246 0.166666667 0 0 12 0 0 12 X:8904991-8905063 6 e(r) FBtr0333604|FBtr0310067|FBtr0071266|FBtr0333605|FBtr0071267 8904357|8904357|8904726|8904357|8904142 8905063|8905063|8905063|8905063|8905063 ACATAT 6mer3-8 dme-miR-190-5p X - 8905024 8905065 stop_codon e(r) FlyBase G49574.1 AAAGGGACGGCGATGCGACAAGATACATACATATAAAACCAA 7 8905042 0.938176824 3 5 20 0.692307692 0.954242509 0 0.571428571 0.769230769 7 4 0 9 X:8905024-8905065 6 5.5 4613 FBgn0011586 7031.946667 923.7566667 1422.636667 0.000782145 0.005953949 0.003866061 4 5 4.5 0.15 dme-miR-317-3p 8mer-A1 TGTGTTCA X 8973005 8973012 - X_8973005_8973012_- 0.629949158 0.630547699 0.630248428 0.000423203 CG10962 FBtr0071263 8972906 8973203 X - 8973000 8973034 3'utr CG10962 FlyBase G65851.1 CGTTTCGTTTTATTTTTATTATTGTGTTCAGTTAC 50 8973013 0.766576934 3 49 665 0.984615385 1.806179974 0.030769231 0.24 0.415384615 50 1 0 64 X:8973000-8973034 8 CG10962 FBtr0071263 8972906 8973203 TGTGTTCA 8mer-A1 dme-miR-317-3p X - 8973000 8973050 3'utr CG10962 FlyBase G49578.1 CTGTTGGCACTCACCTCGTTTCGTTTTATTTTTATTATTGTGTTCAGTTAC 67 8973013 0.75951168 8 64 872 0.947916667 1.180890142 0.197916667 0.343283582 0.541666667 67 0 5 91 X:8973000-8973050 8 55.5 4614 FBgn0030073 904.93 102.5533333 154.9166667 0.061330711 0.541181824 0.358257127 1 1 1 0.15 dme-miR-13b-2-5p 6mer3-8 TTTGAC X 9072608 9072613 - X_9072608_9072613_- 0.775102641 0.885484669 0.830293655 0.078051931 CG44325 FBtr0339661 9072293 9072906 X - 9072591 9072613 3'utr CG44325 FlyBase G65862.1 TTTGACCTTTTTTGCAAATTTTG 6 9072604 0.688614511 5 6 72 1 0.903089987 0 0.333333333 0.5 6 0 0 8 X:9072591-9072613 6 CG44325 FBtr0339661 9072293 9072906 TTTGAC 6mer3-8 dme-miR-13b-2-5p X - 9072591 9072613 3'utr CG44325 FlyBase G49589.1 TTTGACCTTTTTTGCAAATTTTG 7 9072604 0.691535957 4 6 85 0.777777778 0.84509804 0 0.285714286 0.444444444 7 2 0 7 X:9072591-9072613 6 6.5 4615 FBgn0265413 401.4 65.42666667 100.4933333 0.016193323 0.09934787 0.064680908 -9 -9 -9 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 9085739 9085745 + X_9085739_9085745_+ 0.800558597 0.800186607 0.800372602 0.000263044 APC4 FBtr0071285|FBtr0071285|FBtr0071285|FBtr0309872|FBtr0309872|FBtr0309872 9085700|9085700|9085700|9085700|9085700|9085700 9085867|9085867|9085867|9085867|9085867|9085867 X + 9085728 9085750 3'utr APC4 FlyBase G59975.1 ATTGATTGTTGTGTGATAACTTA 9 9085736 0.697389284 3 8 82 0.9375 0.875061263 0 0.444444444 0.6875 9 0 1 15 X:9085728-9085750 7 APC4 FBtr0071285|FBtr0071285|FBtr0071285|FBtr0309872|FBtr0309872|FBtr0309872 9085700|9085700|9085700|9085700|9085700|9085700 9085867|9085867|9085867|9085867|9085867|9085867 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X + 9085727 9085751 3'utr APC4 FlyBase G45344.1 TATTGATTGTTGTGTGATAACTTAA 9 9085737 0.660400306 4 9 81 1 1.176091259 0 0.555555556 0.733333333 9 0 0 15 X:9085727-9085751 7 9 4616 FBgn0052707 194.3333333 9.046666667 13.88 0.046312178 0.994841562 0.648414986 3 2 2.5 0.15 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA X 9088039 9088045 + X_9088039_9088045_+ 0.820937103 0.823251026 0.822094065 0.001636174 CG32706 FBtr0071287 9088008 9088073 X + 9088023 9088049 3'utr CG32706 FlyBase G59979.1 CTTTGCTTCCAATGTCTACCTGACTGC 5 9088036 0.707473925 2 2 28 0.666666667 0.602059991 0.166666667 0.2 0.333333333 5 2 0 4 X:9088023-9088049 7 CG32706 FBtr0071287 9088008 9088073 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" X + 9088018 9088051 3'utr CG32706 FlyBase G45348.1 TAGACCTTTGCTTCCAATGTCTACCTGACTGCAA 5 9088037 0.931568935 3 5 35 1 0.698970004 0.2 0 0 5 0 0 5 X:9088018-9088051 7 4.5 4617 FBgn0052706 14.77333333 2.05 3.03 0.304602888 2.195121951 1.485148515 3 2 2.5 0.15 dme-miR-980-3p 8mer-A1 GGCAGCTA X 9093750 9093757 - X_9093750_9093757_- 0.668585599 0.668639879 0.668612739 3.84E-05 CG7766 FBtr0114594|FBtr0309250|FBtr0343319|FBtr0071351|FBtr0071352|FBtr0114595|FBtr0309251 9093610|9093610|9093610|9093610|9093610|9093610|9093610 9094242|9094242|9094242|9094242|9094242|9094242|9094242 X - 9093721 9093895 3'utr CG7766 FlyBase G65868.1 TGTACGTATGTGTTGAGACCTTGGAAAGATACTCCAAAACTGCACCCAAAAAACCGATCCTAACCCCGCCACACCACCCAGCCAATCCATTTAGTAAGCCAACCCATGCTGCTCGGATACAGATTTGTTTTTTGTACTGGCAGCTATTTTACAGCGACAACACTTTCGATTGTTT 47 9093758 0.987847864 16 45 396 0.961538462 1.698970004 0.153846154 0.106382979 0.192307692 47 2 0 50 X:9093721-9093895 8 CG7766 FBtr0114595|FBtr0309251|FBtr0071351|FBtr0071352|FBtr0309250|FBtr0343319|FBtr0114594 9093610|9093610|9093610|9093610|9093610|9093610|9093610 9094242|9094242|9094242|9094242|9094242|9094242|9094242 GGCAGCTA 8mer-A1 dme-miR-980-3p X - 9093715 9093775 3'utr CG7766 FlyBase G49592.1 AGATTTGTTTTTTGTACTGGCAGCTATTTTACAGCGACAACACTTTCGATTGTTTTAACTT 26 9093758 0.880291063 5 25 244 0.945945946 1.544068044 0.054054054 0.307692308 0.513513514 26 2 0 35 X:9093715-9093775 8 29 4618 FBgn0030087 549.9233333 13.47666667 20.56666667 0.052734624 2.151867425 1.410048622 1 1 1 0.15 dme-miR-1003-3p 7mer-A1 TGTGAGA X 9108152 9108158 + X_9108152_9108158_+ 0.462733228 0.416142557 0.439437893 0.032944529 Arfrp1 FBtr0071293 9107931 9108354 X + 9108141 9108167 3'utr Arfrp1 FlyBase G59997.1 TGTTAGAAAGCTGTGAGACTTCTGCAT 6 9108154 0.75587212 2 6 31 1 1 0.3 0.333333333 0.6 6 0 0 10 X:9108141-9108167 7 Arfrp1 FBtr0071293 9107931 9108354 TGTGAGA 7mer-A1 dme-miR-1003-3p X + 9108103 9108166 3'utr Arfrp1 FlyBase G45368.1 TTTTCGGTTAACTACTGCTGAGAAAATGAGGAAAACAATGTTAGAAAGCTGTGAGACTTCTGCA 6 9108154 0.949285294 3 6 29 1 0.903089987 0 0.166666667 0.375 6 0 0 8 X:9108103-9108166 7 5 4619 FBgn0030088 100.3333333 11.22666667 17.08666667 0.049833887 0.445368171 0.292625829 -2 -2 -2 0.15 dme-miR-184-3p 6mer2-7 CCGTCC X 9117048 9117053 + X_9117048_9117053_+ 0.999845839 0.988762078 0.994303959 0.007837359 AP-1gamma FBtr0071298|FBtr0071294|FBtr0112965|FBtr0333808|FBtr0309254|FBtr0071296|FBtr0071297|FBtr0071295|FBtr0309255 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117739|9117739|9117739|9117741|9117741|9117739|9117739|9117739|9117744 X + 9117032 9117087 5'utr AP-1gamma FlyBase G60015.1 TAATTGTTTTTTTGTCCCGTCCTGAGACTCTTTGATCGGTTCCCGGCTTCTGTGGG 29 9117054 0.834023407 9 27 246 0.916666667 1.51851394 0.388888889 0.172413793 0.333333333 29 3 0 33 X:9117032-9117087 6 AP-1gamma FBtr0333808|FBtr0112965|FBtr0071294|FBtr0071298|FBtr0071295|FBtr0309255|FBtr0071297|FBtr0071296|FBtr0309254 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117741|9117739|9117739|9117739|9117739|9117744|9117739|9117739|9117741 CCGTCC 6mer2-7 dme-miR-184-3p X + 9117033 9117106 5'utr AP-1gamma FlyBase G45380.1 AATTGTTTTTTTGTCCCGTCCTGAGACTCTTTGATCGGTTCCCGGCTTCTGTGGGCCAGCCCCTGATATTCCTT 24 9117054 0.986595538 7 23 199 0.967741935 1.477121255 0.193548387 0.25 0.419354839 24 1 0 30 X:9117033-9117106 6 22 4620 FBgn0030089 1732.843333 43.93 67.95333333 0.012695897 0.500796722 0.323751594 -6 -6 -6 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA X 9117249 9117256 + X_9117249_9117256_+ 0.499663878 0.498224646 0.498944262 0.001017739 AP-1gamma FBtr0071298|FBtr0071294|FBtr0112965|FBtr0333808|FBtr0309254|FBtr0071296|FBtr0071297|FBtr0071295|FBtr0309255 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117739|9117739|9117739|9117741|9117741|9117739|9117739|9117739|9117744 X + 9117221 9117286 5'utr AP-1gamma FlyBase G60016.1 ATGATGTATTGTTATTTCCTGTGCGCACGTACTTAAAGCGGAAAATCAGCAGCAACCAGAGAAAGT 53 9117236 0.993922077 10 35 449 0.661016949 1.113943352 0.322033898 0.094339623 0.186440678 53 18 2 39 X:9117221-9117286 8 AP-1gamma FBtr0333808|FBtr0112965|FBtr0071294|FBtr0071298|FBtr0071295|FBtr0309255|FBtr0071297|FBtr0071296|FBtr0309254 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117741|9117739|9117739|9117739|9117739|9117744|9117739|9117739|9117741 GTACTTAA 8mer-A1 dme-miR-252-5p X + 9117223 9117269 5'utr AP-1gamma FlyBase G45381.1 GATGTATTGTTATTTCCTGTGCGCACGTACTTAAAGCGGAAAATCAG 40 9117236 0.860504341 8 26 322 0.656716418 1.342422681 0.447761194 0.45 0.671641791 40 22 1 44 X:9117223-9117269 8 45.5 4621 FBgn0030089 1732.843333 43.93 67.95333333 0.026257423 1.035738675 0.669577161 13 13 13 0.15 dme-miR-2a-2-5p 8mer-A1 TGATGAGA X 9117456 9117463 + X_9117456_9117463_+ 0.600867886 0.599926636 0.600397261 0.0006656 AP-1gamma FBtr0071298|FBtr0071294|FBtr0112965|FBtr0333808|FBtr0309254|FBtr0071296|FBtr0071297|FBtr0071295|FBtr0309255 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117739|9117739|9117739|9117741|9117741|9117739|9117739|9117739|9117744 X + 9117418 9117507 5'utr AP-1gamma FlyBase G60018.1 TTAGTTGCCGTCGCCGAGATGAGATGAGATGATGATGATGATGAGACGATGGATATGGAAATGACGATGATGATGATGGGGGGCATCGAG 17 9117467 0.861172467 8 15 74 0.833333333 1.176091259 0.5 0.058823529 0.111111111 17 3 0 15 X:9117418-9117507 8 AP-1gamma FBtr0333808|FBtr0112965|FBtr0071294|FBtr0071298|FBtr0071295|FBtr0309255|FBtr0071297|FBtr0071296|FBtr0309254 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117741|9117739|9117739|9117739|9117739|9117744|9117739|9117739|9117741 TGATGAGA 8mer-A1 dme-miR-2a-2-5p X + 9117388 9117486 5'utr AP-1gamma FlyBase G45382.1 GGACGCAGCTTAGAACTATATATTAACTGATTAGTTGCCGTCGCCGAGATGAGATGAGATGATGATGATGATGAGACGATGGATATGGAAATGACGATG 12 9117459 0.965962931 6 11 63 1 1.255272505 0.555555556 0.333333333 0.555555556 12 0 0 18 X:9117388-9117486 8 8 4622 FBgn0030089 1732.843333 43.93 67.95333333 0.00461669 0.182107899 0.117727852 -11 -3 -7 0.15 dme-miR-980-3p 6mer2-7 GCAGCT X 9117570 9117575 + X_9117570_9117575_+ 0.99536676 0.995554719 0.995460739 0.000132865 AP-1gamma FBtr0071298|FBtr0071294|FBtr0112965|FBtr0333808|FBtr0309254|FBtr0071296|FBtr0071297|FBtr0071295|FBtr0309255 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117739|9117739|9117739|9117741|9117741|9117739|9117739|9117739|9117744 X + 9117547 9117627 5'utr AP-1gamma FlyBase G60019.1 TATTACGATTATAAATGAATTGCGCAGCTGTATGAGAAGGAAAGAGAGGGAGAGAGATAAGAAAATAATAACATTAACATA 78 9117567 0.91955567 9 71 297 0.925531915 1.337459261 0.319148936 0.153846154 0.29787234 78 4 3 87 X:9117547-9117627 6 AP-1gamma FBtr0333808|FBtr0112965|FBtr0071294|FBtr0071298|FBtr0071295|FBtr0309255|FBtr0071297|FBtr0071296|FBtr0309254 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117741|9117739|9117739|9117739|9117739|9117744|9117739|9117739|9117741 GCAGCT 6mer2-7 dme-miR-980-3p X + 9117553 9117628 5'utr AP-1gamma FlyBase G45383.1 GATTATAAATGAATTGCGCAGCTGTATGAGAAGGAAAGAGAGGGAGAGAGATAAGAAAATAATAACATTAACATAT 48 9117567 0.884982527 8 45 167 0.931506849 1.832508913 0.328767123 0.416666667 0.616438356 48 5 0 68 X:9117553-9117628 6 32 4623 FBgn0030089 1732.843333 43.93 67.95333333 0.018466759 0.728431596 0.47091141 3 3 3 0.15 dme-miR-1008-3p 6mer3-8 AGCTGT X 9151749 9151754 + X_9151749_9151754_+ 0.999884471 0.999999962 0.999942217 8.17E-05 dalao FBtr0071300 9151671 9151976 X + 9151718 9151802 3'utr dalao FlyBase G60039.1 ATATATGAATCGATCCCTGGTGTTGTAACATAGCTGTCCCCTCCCGGAACTTCCGGAAGGCAAACAACCGGAATGCTCTTAACTT 26 9151748 0.946513453 9 23 153 0.85 1.531478917 0.1 0.384615385 0.6 26 6 0 34 X:9151718-9151802 6 dalao FBtr0071300 9151671 9151976 AGCTGT 6mer3-8 dme-miR-1008-3p X + 9151723 9151768 3'utr dalao FlyBase G45394.1 TGAATCGATCCCTGGTGTTGTAACATAGCTGTCCCCTCCCGGAACT 5 9151740 0.984429879 4 4 29 0.5 0.602059991 0.125 0.2 0.5 5 4 0 4 X:9151723-9151768 6 9 4624 FBgn0030093 788.6633333 35.47 53.86 0.011411713 0.253735551 0.167099889 1 9 5 0.15 dme-miR-277-3p 7mer-m8 TGCATTT X 9153073 9153079 - X_9153073_9153079_- 0.62020238 0.620202853 0.620202617 3.54E-07 His3.3B FBtr0340343 9152521 9154111 X - 9152946 9153138 3'utr His3.3B FlyBase G65891.1 ACATAACGAAGGGATGGGCGTGACAGAGTTAGTTGATTAAATAAGATTTTAGATTTACATGCATTTTATACGTTTAGGCGGACGATAGAAGATGATTCTTCTTCGGGAGATGAAAAAAAGATATAAAGATGATTCAGCAATCAGATTAACTTACACATCTATAGATTTGGAAGAGCATCGAATAAAAATAACC 172 9153073 0.848434979 32 152 1447 0.905472637 1.658011397 0.164179104 0.156976744 0.278606965 172 16 3 182 X:9152946-9153138 7 His3.3B FBtr0340343 9152521 9154111 TGCATTT 7mer-m8 dme-miR-277-3p X - 9152949 9153134 3'utr His3.3B FlyBase G49612.1 AACGAAGGGATGGGCGTGACAGAGTTAGTTGATTAAATAAGATTTTAGATTTACATGCATTTTATACGTTTAGGCGGACGATAGAAGATGATTCTTCTTCGGGAGATGAAAAAAAGATATAAAGATGATTCAGCAATCAGATTAACTTACACATCTATAGATTTGGAAGAGCATCGAATAAAAATA 117 9153073 0.803406756 34 98 925 0.847058824 1.857332496 0.147058824 0.367521368 0.564705882 117 25 1 144 X:9152949-9153134 7 92.5 4625 FBgn0004828 21818.69667 1276.286667 1948.03 0.004239483 0.072475881 0.047483868 -6 -6 -6 0.15 dme-miR-305-5p 6mer3-8 AGTACA X 9153346 9153351 - X_9153346_9153351_- 0.966566747 0.728690004 0.847628375 0.168204228 His3.3B FBtr0340343|FBtr0071345|FBtr0071347|FBtr0071346 9152521|9153236|9153236|9153236 9154111|9154111|9154111|9154111 X - 9153287 9153479 3'utr His3.3B FlyBase G65893.1 GCGGACCGCCTGGCGGTGATTCCCGGATCTCTGGATGGGCGGCGAGGGCATGGCCGTCTGGCGATGCCACTGACGGCACGCGGCTTTTATGAAGATAATATCCATATATAACACCGAAGACCGAATCGAGTACACTTAACTTTACACTTACGTATATGCATATATATACATAAATACATATATATATAAATAT 985 9153344 0.932819763 33 960 5313 0.972555746 2.151523068 0.268439108 0.150253807 0.282161235 985 25 7 1134 X:9153287-9153479 6 His3.3B FBtr0071346|FBtr0071347|FBtr0071345|FBtr0340343 9153236|9153236|9153236|9152521 9154111|9154111|9154111|9154111 AGTACA 6mer3-8 dme-miR-305-5p X - 9153290 9153496 3'utr His3.3B FlyBase G49614.1 AAGGCGGACAGACGGTTGCGGACCGCCTGGCGGTGATTCCCGGATCTCTGGATGGGCGGCGAGGGCATGGCCGTCTGGCGATGCCACTGACGGCACGCGGCTTTTATGAAGATAATATCCATATATAACACCGAAGACCGAATCGAGTACACTTAACTTTACACTTACGTATATGCATATATATACATAAATACATATATATATAAA 610 9153344 0.95625141 28 588 3164 0.971891892 2.254789687 0.28972973 0.37704918 0.589189189 610 22 4 899 X:9153290-9153496 6 646 4626 FBgn0004828 21818.69667 1276.286667 1948.03 0.029607635 0.506155879 0.33161707 -7 -7 -7 0.15 dme-miR-33-5p 8mer-m1 CAATGCAC X 9156968 9156975 - X_9156968_9156975_- 0.640880908 0.45872606 0.549803484 0.128802894 Ost48 FBtr0071344 9156927 9157007 X - 9156935 9156992 3'utr Ost48 FlyBase G65898.1 AACTCAAATGTAACACACAATGCACTAAAATAAAGTTCTCTGCAGAGAGAAACCCACA 19 9156967 0.930232969 3 19 69 1 1.361727836 0.043478261 0.210526316 0.347826087 19 0 0 23 X:9156935-9156992 8 Ost48 FBtr0071344 9156927 9157007 CAATGCAC 8mer-m1 dme-miR-33-5p X - 9156963 9156992 3'utr Ost48 FlyBase G49621.1 AACTCAAATGTAACACACAATGCACTAAAA 10 9156967 0.927262937 2 9 32 0.933333333 0.84509804 0 0.4 0.6 10 0 1 14 X:9156963-9156992 8 14 4627 FBgn0014868 1360 108.53 164.8033333 0.010294118 0.128996591 0.084949738 -8 -8 -8 0.15 dme-bantam-3p 7mer-m8 TGATCTC X 9171625 9171631 + X_9171625_9171631_+ 0.661583744 0.661490248 0.661536996 6.61E-05 mei-P26 FBtr0333474|FBtr0333473|FBtr0333475 9170814|9170814|9170814 9189309|9189309|9175190 X + 9171581 9171657 3'utr mei-P26 FlyBase G60057.1 AAACCAATAACAGATGATAAACAAAATGCAACAAATACTATTTTTGATCTCTAATTTAAAAACAATTAGCGCTACTA 115 9171624 0.99202655 14 111 1231 0.965034965 1.838849091 0 0.2 0.356643357 115 4 1 138 X:9171581-9171657 7 mei-P26 FBtr0071303|FBtr0340341|FBtr0333475|FBtr0333473|FBtr0333474 9170814|9170814|9170814|9170814|9170814 9171659|9171659|9175190|9189309|9189309 TGATCTC 7mer-m8 dme-bantam-3p X + 9171604 9171643 3'utr mei-P26 FlyBase G45407.1 AAATGCAACAAATACTATTTTTGATCTCTAATTTAAAAAC 79 9171623 0.618583064 11 76 862 0.963636364 2.025305865 0 0.316455696 0.509090909 79 4 0 106 X:9171604-9171643 7 95 4628 FBgn0026206 3669.783333 46.77 72.34333333 0.025887087 2.031216592 1.313182509 1 2 1.5 0.15 dme-miR-79-3p 7mer-m8 TAGCTTT X 9171969 9171975 + X_9171969_9171975_+ 0.610276652 0.607754121 0.609015386 0.001783748 mei-P26 FBtr0333474|FBtr0333473|FBtr0333475 9170814|9170814|9170814 9189309|9189309|9175190 X + 9171948 9171998 3'utr mei-P26 FlyBase G60058.2 TATATTGTTATATCGACCGATTAGCTTTTTTGTGCATACCCTTCCAGAATC 136 9171968 0.896928082 6 135 1345 1 2.227886705 0.337278107 0.213235294 0.366863905 136 0 0 169 X:9171948-9171998 7 mei-P26 FBtr0333475|FBtr0333473|FBtr0333474 9170814|9170814|9170814 9175190|9189309|9189309 TAGCTTT 7mer-m8 dme-miR-79-3p X + 9171921 9171991 3'utr mei-P26 FlyBase G45408.1 ATGTTACTTATTATCTATATAGACATATATATTGTTATATCGACCGATTAGCTTTTTTGTGCATACCCTTC 102 9171968 0.989417039 5 102 990 1 2.176091259 0.433333333 0.37254902 0.573333333 102 0 0 150 X:9171921-9171991 7 115.5 4629 FBgn0026206 3669.783333 46.77 72.34333333 0.031473248 2.469531751 1.596553472 1 1 1 0.15 dme-miR-965-3p 6mer3-8 TACGCT X 9172294 9172299 + X_9172294_9172299_+ 0.652899412 0.993138761 0.823019086 0.240585587 mei-P26 FBtr0333474|FBtr0333473|FBtr0333475 9170814|9170814|9170814 9189309|9189309|9175190 X + 9172261 9172338 3'utr mei-P26 FlyBase G60060.1 CAGAAAATAACAAAAACTGTTTAGGTTTTTCCTTACGCTGCTTATATAAGGTGATATCTATTTATATATAAATCTATA 28 9172307 0.989789074 10 28 276 1 1.491361694 0.064516129 0.071428571 0.161290323 28 0 0 31 X:9172261-9172338 6 mei-P26 FBtr0333475|FBtr0333473|FBtr0333474 9170814|9170814|9170814 9175190|9189309|9189309 TACGCT 6mer3-8 dme-miR-965-3p X + 9172282 9172328 3'utr mei-P26 FlyBase G45409.1 TAGGTTTTTCCTTACGCTGCTTATATAAGGTGATATCTATTTATATA 13 9172294 0.789784295 6 12 129 0.95 1.278753601 0 0.307692308 0.55 13 1 0 19 X:9172282-9172328 6 14 4630 FBgn0026206 3669.783333 46.77 72.34333333 0.003814939 0.299337182 0.193521633 -13 0 -6.5 0.15 dme-miR-263a-5p 7mer-A1 TGCCATA X 9172415 9172421 + X_9172415_9172421_+ 0.782908909 0.782905218 0.782907064 2.62E-06 mei-P26 FBtr0333474|FBtr0333473|FBtr0333475 9170814|9170814|9170814 9189309|9189309|9175190 X + 9172382 9172434 3'utr mei-P26 FlyBase G60061.1 ACATATATGTGAAATCCTATGACTATATGACTTTGCCATATAATATACAAAGC 12 9172413 0.992123385 6 8 96 0.714285714 1 0.071428571 0.083333333 0.214285714 12 4 0 10 X:9172382-9172434 7 mei-P26 FBtr0333475|FBtr0333473|FBtr0333474 9170814|9170814|9170814 9175190|9189309|9189309 TGCCATA 7mer-A1 dme-miR-263a-5p X + 9172371 9172430 3'utr mei-P26 FlyBase G45410.1 ATATATCTTAAACATATATGTGAAATCCTATGACTATATGACTTTGCCATATAATATACA 12 9172414 0.986068155 8 10 88 0.8125 0.812913357 0.125 0.333333333 0.5 12 2 1 13 X:9172371-9172430 7 7.5 4631 FBgn0026206 3669.783333 46.77 72.34333333 0.002043717 0.160359205 0.103672303 2 1 1.5 0.15 dme-miR-980-5p 7mer-m1 AAAAACT X 9173607 9173613 + X_9173607_9173613_+ 0.684156326 0.744022608 0.714089467 0.042331867 mei-P26 FBtr0333474|FBtr0333473|FBtr0333475 9170814|9170814|9170814 9189309|9189309|9175190 X + 9173558 9173620 3'utr mei-P26 FlyBase G60068.1 ATGTTAATCCCATCATTGGCATTTGTGTACCACAATGCGGCGCGGAGCTAAAAACTGTTTTAA 25 9173616 0.986497038 8 16 138 0.741935484 1.06069784 0.096774194 0.24 0.387096774 25 7 1 23 X:9173558-9173620 7 mei-P26 FBtr0333475|FBtr0333473|FBtr0333474 9170814|9170814|9170814 9175190|9189309|9189309 AAAAACT 7mer-m1 dme-miR-980-5p X + 9173536 9173636 3'utr mei-P26 FlyBase G45416.1 TGTTTTAAACAGCAAAAATCTTATGTTAATCCCATCATTGGCATTTGTGTACCACAATGCGGCGCGGAGCTAAAAACTGTTTTAAATCTTGTCATTTTTCT 21 9173616 0.983552774 9 18 148 0.928571429 1.414973348 0.035714286 0.285714286 0.464285714 21 2 0 26 X:9173536-9173636 7 16 4632 FBgn0026206 3669.783333 46.77 72.34333333 0.00435993 0.342099637 0.221167581 -9 -9 -9 0.15 dme-miR-282-5p 7mer-A1 GAGGCTA X 9173864 9173870 + X_9173864_9173870_+ 0.820316264 0.81941131 0.819863787 0.000639932 mei-P26 FBtr0333474|FBtr0333473|FBtr0333475 9170814|9170814|9170814 9189309|9189309|9175190 X + 9173778 9173877 3'utr mei-P26 FlyBase G60070.1 ACCATCATTTACTATTGTCATTATTATTAATTATTATTAATTATTATTATTATTATTATTGTTTAGTTTTTACGTTGTTACATTGTGAGGCTACACACAA 29 9173863 0.985569042 9 28 256 0.96875 1.190331698 0.0625 0.103448276 0.1875 29 0 1 31 X:9173778-9173877 7 mei-P26 FBtr0333475|FBtr0333473|FBtr0333474 9170814|9170814|9170814 9175190|9189309|9189309 GAGGCTA 7mer-A1 dme-miR-282-5p X + 9173834 9173882 3'utr mei-P26 FlyBase G45419.1 TATTGTTTAGTTTTTACGTTGTTACATTGTGAGGCTACACACAATTCTG 23 9173862 0.979367917 4 23 170 1 1.579783597 0.105263158 0.434782609 0.657894737 23 0 0 38 X:9173834-9173882 7 20.5 4633 FBgn0026206 3669.783333 46.77 72.34333333 0.005586161 0.438315159 0.283370963 1 2 1.5 0.15 dme-miR-277-3p 6mer3-8 TGCATT X 9174375 9174380 + X_9174375_9174380_+ 0.966812859 0.999974527 0.983393693 0.023448792 mei-P26 FBtr0333474|FBtr0333473|FBtr0333475 9170814|9170814|9170814 9189309|9189309|9175190 X + 9174360 9174394 3'utr mei-P26 FlyBase G60072.1 AAAATCTTGTCGCGCTGCATTAACTACGGAAGTAT 6 9174379 0.870581671 2 5 38 0.833333333 0.698970004 0.166666667 0 0 6 1 0 5 X:9174360-9174394 6 mei-P26 FBtr0333475|FBtr0333473|FBtr0333474 9170814|9170814|9170814 9175190|9189309|9189309 TGCATT 6mer3-8 dme-miR-277-3p X + 9174311 9174389 3'utr mei-P26 FlyBase G45424.1 TTTCCTTAAACCACCTAAACTTTCCTTTCCATTTTCGCATAAATACTTTAAAATCTTGTCGCGCTGCATTAACTACGGA 5 9174367 0.983657077 5 5 42 1 0.698970004 0 0 0 5 0 0 5 X:9174311-9174389 6 4.5 4634 FBgn0026206 3669.783333 46.77 72.34333333 0.00122623 0.096215523 0.062203382 -4 8 2 0.15 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 9176121 9176127 + X_9176121_9176127_+ 0.820573015 0.809645538 0.815109277 0.007726909 mei-P26 FBtr0333474|FBtr0333473 9170814|9170814 9189309|9189309 X + 9176086 9176139 3'utr mei-P26 FlyBase G60078.1 GCGAATGAAGGACGAACCTTTTGATAAAGATGCTGCCAAAGATTTTTTATACAA 12 9176118 0.976855653 5 12 77 1 1.204119983 0.0625 0.25 0.4375 12 0 0 16 X:9176086-9176139 7 mei-P26 FBtr0333473|FBtr0333474 9170814|9170814 9189309|9189309 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X + 9176091 9176140 3'utr mei-P26 FlyBase G45428.1 TGAAGGACGAACCTTTTGATAAAGATGCTGCCAAAGATTTTTTATACAAT 11 9176119 0.986456592 2 9 86 0.846153846 1.041392685 0 0.181818182 0.307692308 11 2 0 11 X:9176091-9176140 7 11 4635 FBgn0026206 3669.783333 46.77 72.34333333 0.002997452 0.2351935 0.152052712 3 2 2.5 0.15 dme-miR-999-3p 6mer2-7 GTTAAC X 9194832 9194837 - X_9194832_9194837_- 0.66883884 0.839383947 0.754111393 0.120593597 CG12118 FBtr0071340|FBtr0071339 9194748|9194748 9194918|9194918 X - 9194781 9194901 3'utr CG12118 FlyBase G65906.1 GTGGTTGCCATTGGAGTTGGACTCCAAATGATGAAGCCGTAGCCTTTTAAGCGATGATGACTGTGTTAACTGTTTAGGTTTCCTGTTCCGACACTGTATATAGCCGACAATGCTGGTGTTA 169 9194844 0.987365231 16 161 1415 0.95215311 1.997823081 0.119617225 0.189349112 0.344497608 169 9 1 199 X:9194781-9194901 6 CG12118 FBtr0071339|FBtr0071340 9194748|9194748 9194918|9194918 GTTAAC 6mer2-7 dme-miR-999-3p X - 9194821 9194862 3'utr CG12118 FlyBase G49627.2 TAGCCTTTTAAGCGATGATGACTGTGTTAACTGTTTAGGTTT 137 9194844 0.693953326 7 129 997 0.961206897 2.348304863 0.099137931 0.437956204 0.668103448 137 9 0 223 X:9194821-9194862 6 142 4636 FBgn0030101 135.7533333 13.14666667 20.01666667 1.046014831 10.80121704 7.09408826 7 7 7 0.15 dme-miR-965-3p 6mer2-7 ACGCTT X 9228908 9228913 - X_9228908_9228913_- 0.999836174 0.999146812 0.999491493 0.000487479 CG12121 FBtr0071334 9228794 9229267 X - 9228831 9228935 3'utr CG12121 FlyBase G65936.1 AATCCGCTTAACGGAATACTGAACGCTTGTGACACCCAGGCCCTATCCTTGGTTTAAGATATACATATACATATAAATAAATACACTTATGTAATTACCTATAAT 21 9228907 0.964455243 8 21 117 1 1.342422681 0.272727273 0.047619048 0.090909091 21 0 0 22 X:9228831-9228935 6 CG12121 FBtr0071334 9228794 9229267 ACGCTT 6mer2-7 dme-miR-965-3p X - 9228844 9228939 3'utr CG12121 FlyBase G49658.1 AATGAATCCGCTTAACGGAATACTGAACGCTTGTGACACCCAGGCCCTATCCTTGGTTTAAGATATACATATACATATAAATAAATACACTTATGT 17 9228908 0.975830396 5 15 96 0.875 1.021189299 0 0.294117647 0.5 17 2 1 21 X:9228844-9228939 6 14.5 4637 FBgn0030109 1482.023333 60.82 93.35 0.009783922 0.238408418 0.155329405 -6 -5 -5.5 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 923037 923043 - X_923037_923043_- 0.695423436 0.688202253 0.691812845 0.005106089 CG3711 FBtr0343361|FBtr0343361|FBtr0343361 922887|922887|922887 924213|924213|924213 X - 922984 923061 5'utr CG3711 FlyBase G63924.1 AATTCTTGTTTCCGAAATTGTGATAAATCAGTTTATTTATGATTGCATTGTGACTATGTTTAAGCAATATTTAAGAAT 37 923044 0.987956581 7 35 319 0.933333333 1.146128036 0.244444444 0.189189189 0.333333333 37 1 2 42 X:922984-923061 7 CG3711 FBtr0343361|FBtr0343361|FBtr0343361 922887|922887|922887 924213|924213|924213 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 923031 923059 5'utr CG3711 FlyBase G48188.1 TTCTTGTTTCCGAAATTGTGATAAATCAG 20 923044 0.814829715 2 20 159 1 1.505149978 0.375 0.4 0.625 20 0 0 32 X:923031-923059 7 26 4638 FBgn0040344 266.6666667 7.813333333 11.92 0.0975 3.327645051 2.181208054 1 1 1 0.15 dme-miR-305-5p 7mer-m8 AGTACAA X 923293 923299 - X_923293_923299_- 0.642999836 0.551572266 0.597286051 0.064649005 CG3711 FBtr0331303|FBtr0343361 923166|922887 924144|924213 X - 923251 923312 5'utr CG3711 FlyBase G63926.1 ATACTAATACCCAAGTACAACTTACTAGTTGATATAGATCTAAATCTACTCGTTTTAATTGG 6 923290 0.947407874 4 6 38 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 X:923251-923312 7 CG3711 FBtr0331303|FBtr0343361 923166|922887 924144|924213 AGTACAA 7mer-m8 dme-miR-305-5p X - 923268 923313 5'utr CG3711 FlyBase G48190.1 TATACTAATACCCAAGTACAACTTACTAGTTGATATAGATCTAAAT 9 923290 0.787640993 4 7 70 0.615384615 0.903089987 0 0.333333333 0.538461538 9 5 0 8 X:923268-923313 7 7 4639 FBgn0040344 266.6666667 7.813333333 11.92 0.02625 0.895904437 0.587248322 -9 -9 -9 0.15 dme-miR-988-3p 6mer2-7 CAAGGG X 923359 923364 - X_923359_923364_- 0.983414872 0.993668358 0.988541615 0.007250319 CG3711 FBtr0331303|FBtr0343361 923166|922887 924144|924213 X - 923319 923372 5'utr CG3711 FlyBase G63927.1 TTATTTTGCAAGGGTCATAGGCTTATAGTCTCCGAAGTCCGAGGGTCTTCCCTT 11 923355 0.854067926 4 11 92 1 1.041392685 0.090909091 0 0 11 0 0 11 X:923319-923372 6 CG3711 FBtr0331303|FBtr0343361 923166|922887 924144|924213 CAAGGG 6mer2-7 dme-miR-988-3p X - 923343 923372 5'utr CG3711 FlyBase G48191.1 TTATTTTGCAAGGGTCATAGGCTTATAGTC 7 923356 0.838362812 3 7 55 1 1.113943352 0 0.428571429 0.692307692 7 0 0 13 X:923343-923372 6 7 4640 FBgn0040344 266.6666667 7.813333333 11.92 0.02625 0.895904437 0.587248322 -9 -8 -8.5 0.15 dme-bantam-3p 6mer3-8 TGATCT X 923743 923748 - X_923743_923748_- 0.981143342 0.999963719 0.990553531 0.013308032 CG3711 FBtr0331303|FBtr0343361 923166|922887 924144|924213 X - 923726 923769 5'utr CG3711 FlyBase G63928.2 TATAGGTTTTGTTAAAACACTTGATCTTTAAACCTTATAGTTGC 41 923748 0.832309161 6 38 343 0.9375 1.352182518 0.0625 0.12195122 0.25 41 2 1 45 X:923726-923769 6 CG3711 FBtr0331303|FBtr0343361 923166|922887 924144|924213 TGATCT 6mer3-8 dme-bantam-3p X - 923724 923757 5'utr CG3711 FlyBase G48192.1 TAAAACACTTGATCTTTAAACCTTATAGTTGCAG 16 923748 0.767529471 4 14 134 0.869565217 1 0.173913043 0.3125 0.52173913 16 2 1 20 X:923724-923757 6 27.5 4641 FBgn0040344 266.6666667 7.813333333 11.92 0.103125 3.519624573 2.30704698 0 0 0 0.15 dme-miR-980-5p 6mer2-7 AAAAAC X 9246098 9246103 - X_9246098_9246103_- 0.999874717 0.999999992 0.999937355 8.86E-05 amx FBtr0307281|FBtr0071331 9245913|9245913 9246206|9246206 X - 9246040 9246134 3'utr amx FlyBase G65962.1 ATGCAACCATTAGGAATAGCAAGATCTTCTCAAAAACGTGTACATAATTAATTAGGAAATGTATTTTATTAATAATGCCAAAAGTTCTTTTTTGT 30 9246105 0.882177299 9 29 193 0.970588235 1.51851394 0 0.133333333 0.235294118 30 1 0 33 X:9246040-9246134 6 amx FBtr0307281|FBtr0071331 9245913|9245913 9246206|9246206 AAAAAC 6mer2-7 dme-miR-980-5p X - 9246047 9246133 3'utr amx FlyBase G49675.1 TGCAACCATTAGGAATAGCAAGATCTTCTCAAAAACGTGTACATAATTAATTAGGAAATGTATTTTATTAATAATGCCAAAAGTTCT 14 9246106 0.969540756 6 14 83 1 1.278753601 0.105263158 0.214285714 0.421052632 14 0 0 19 X:9246047-9246133 6 15 4642 FBgn0000077 117.3333333 12.09666667 18.64666667 0.127840909 1.240011022 0.804433321 2 3 2.5 0.15 dme-miR-317-3p 7mer-m8 TGTGTTC X 9254901 9254907 + X_9254901_9254907_+ 0.654724076 0.661615637 0.658169857 0.004873026 CG17754 FBtr0071315|FBtr0340122 9254354|9254354 9255031|9255802 X + 9254865 9255018 5'utr-coding CG17754 FlyBase G60111.1 AACTGCAGCTCACCTTCGCCTCGCCTCGCTCTCGTCTGTGTTCTGACATGATTCCCTGTGGTATGGCATACACCCAGAACTCACCCACTTTCCGCACCGCACACCCCAACCCAGTATTTTCCCCATAACTCTGCTCTTTTCGGCTTGAATCTAA 27 9254899 0.905039927 13 25 176 0.9375 1.477121255 0 0.185185185 0.3125 27 2 0 30 X:9254865-9255018 7 CG17754 FBtr0071315 9254354 9255031 TGTGTTC 7mer-m8 dme-miR-317-3p X + 9254866 9254933 5'utr-coding CG17754 FlyBase G45445.1 ACTGCAGCTCACCTTCGCCTCGCCTCGCTCTCGTCTGTGTTCTGACATGATTCCCTGTGGTATGGCAT 7 9254900 0.984101072 5 7 55 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 X:9254866-9254933 7 6 4643 FBgn0030114 175.6666667 7.656666667 11.80666667 0.034155598 0.783630823 0.508187465 2 1 1.5 0.15 dme-miR-317-3p 8mer-A1 TGTGTTCA X 9258195 9258202 + X_9258195_9258202_+ 0.627693451 0.624397009 0.62604523 0.002330978 ric8a FBtr0346166|FBtr0071317 9258082|9258082 9259202|9258670 X + 9258082 9258213 stop_codon ric8a FlyBase G60123.1 AAGCCACAAATGTATTGCGGGATCTGCTATGGCACAACTTCCAAATAGCTACCAAAAAATCACCTTAAACTCTGCATTTATTCCATAAGTTTACTGTCGAATGTAGCTTCGAATGTGTTCAAAAAGCAGATT 33 9258195 0.927909585 12 29 191 0.891891892 1.217483944 0.189189189 0.090909091 0.189189189 33 3 1 33 X:9258082-9258213 8 ric8a FBtr0071317|FBtr0346166 9258082|9258082 9258670|9259202 TGTGTTCA 8mer-A1 dme-miR-317-3p X + 9258175 9258208 3'utr ric8a FlyBase G45456.1 CTGTCGAATGTAGCTTCGAATGTGTTCAAAAAGC 10 9258195 0.676957862 4 10 66 1 1.113943352 0.153846154 0.2 0.384615385 10 0 0 13 X:9258175-9258208 8 13 4644 FBgn0028292 451.68 19.07666667 29.28333333 0.028781438 0.681460772 0.443938532 0 0 0 0.15 dme-miR-986-5p 8mer-A1 ATTCGAGA X 9258250 9258257 + X_9258250_9258257_+ 0.643290881 0.641885082 0.642587982 0.000994051 ric8a FBtr0346166|FBtr0071317 9258082|9258082 9259202|9258670 X + 9258236 9258276 3'utr ric8a FlyBase G60124.1 ATTTTATACCACATATTCGAGAACATCTCATTATAACCTAC 11 9258266 0.744928111 4 9 64 0.8125 1.113943352 0 0.454545455 0.625 11 3 0 13 X:9258236-9258276 8 ric8a FBtr0071317|FBtr0346166 9258082|9258082 9258670|9259202 ATTCGAGA 8mer-A1 dme-miR-986-5p X + 9258241 9258275 3'utr ric8a FlyBase G45457.1 ATACCACATATTCGAGAACATCTCATTATAACCTA 9 9258266 0.632791542 3 9 50 1 1.041392685 0 0.222222222 0.363636364 9 0 0 11 X:9258241-9258275 8 10 4645 FBgn0028292 451.68 19.07666667 29.28333333 0.022139568 0.524200594 0.341491178 -16 -16 -16 0.15 dme-miR-252-5p 7mer-m8 GTACTTA X 9258459 9258465 + X_9258459_9258465_+ 0.588293343 0.588282952 0.588288148 7.28E-06 ric8a FBtr0346166|FBtr0071317 9258082|9258082 9259202|9258670 X + 9258436 9258479 3'utr ric8a FlyBase G60126.1 AACCATTAACCATGTAGAACGTTGTACTTATTAAGTTATTACGC 12 9258458 0.97863072 3 12 125 1 1.113943352 0 0.083333333 0.153846154 12 0 0 13 X:9258436-9258479 7 ric8a FBtr0071317|FBtr0346166 9258082|9258082 9258670|9259202 GTACTTA 7mer-m8 dme-miR-252-5p X + 9258441 9258475 3'utr ric8a FlyBase G45459.1 TTAACCATGTAGAACGTTGTACTTATTAAGTTATT 7 9258458 0.80285385 3 7 70 1 1 0 0.285714286 0.5 7 0 0 10 X:9258441-9258475 7 9.5 4646 FBgn0028292 451.68 19.07666667 29.28333333 0.021032589 0.497990564 0.324416619 1 1 1 0.15 dme-miR-317-3p 8mer-A1 TGTGTTCA X 9259075 9259082 + X_9259075_9259082_+ 0.625682562 0.627410628 0.626546595 0.001221881 ric8a FBtr0346166 9258082 9259202 X + 9259045 9259101 3'utr ric8a FlyBase G60127.1 ATATACAAGAAATCCTATCTAGAGCTTTATTGTGTTCAATTTGCTATAGCGATGATA 41 9259074 0.99074126 2 41 449 1 1.716003344 0.461538462 0.195121951 0.365384615 41 0 0 52 X:9259045-9259101 8 ric8a FBtr0346166 9258082 9259202 TGTGTTCA 8mer-A1 dme-miR-317-3p X + 9259058 9259101 3'utr ric8a FlyBase G45460.1 CCTATCTAGAGCTTTATTGTGTTCAATTTGCTATAGCGATGATA 23 9259074 0.76109212 2 22 258 0.941176471 1.028028724 0.411764706 0.347826087 0.558823529 23 0 2 32 X:9259058-9259101 8 32 4647 FBgn0028292 451.68 19.07666667 29.28333333 0.070846617 1.677441901 1.09277177 1 1 1 0.15 dme-miR-92b-3p 6mer3-8 GTGCAA X 9325144 9325149 - X_9325144_9325149_- 0.72058852 0.870497487 0.795543003 0.10600167 CG34449 FBtr0308591|FBtr0343029|FBtr0343028|FBtr0112753 9324506|9324506|9324506|9324506 9331441|9327258|9327258|9327258 X - 9325083 9325153 3'utr CG34449 FlyBase G65996.1 AATTGTGCAAGGATCAAAACTTGTATAGACTATGCAGTAAGGTGCGCGACATAAGTGTCTGGAGCAGGCAG 15 9325121 0.968965714 4 14 87 1 1.230448921 0.117647059 0.066666667 0.176470588 15 0 0 17 X:9325083-9325153 6 CG34449 FBtr0343029|FBtr0308591|FBtr0343028|FBtr0112753 9324506|9324506|9324506|9324506 9327258|9331441|9327258|9327258 GTGCAA 6mer3-8 dme-miR-92b-3p X - 9325087 9325149 3'utr CG34449 FlyBase G49703.1 GTGCAAGGATCAAAACTTGTATAGACTATGCAGTAAGGTGCGCGACATAAGTGTCTGGAGCAG 12 9325121 0.970001789 3 12 71 1 1.230448921 0.294117647 0.333333333 0.529411765 12 0 0 17 X:9325087-9325149 6 4.5 4648 FBgn0085478 770.6366667 27.55 42.22 0.005839328 0.163339383 0.106584557 -28 -28 -28 0.15 dme-miR-34-5p 7mer-A1 ACTGCCA X 9358432 9358438 + X_9358432_9358438_+ 0.823271287 0.823227551 0.823249419 3.09E-05 BCL7-like FBtr0071358 9357680 9358594 X + 9358376 9358454 3'utr BCL7-like FlyBase G60146.1 AACCAGTAAACCTCTTTATAGTACACTTACCAACATAAATGTGACATTAACATTTAACTGCCAGCAGGGCGCGAAAAAT 27 9358429 0.701607745 7 24 148 0.939393939 1.190331698 0.272727273 0.148148148 0.303030303 27 1 1 31 X:9358376-9358454 7 BCL7-like FBtr0071358 9357680 9358594 ACTGCCA 7mer-A1 dme-miR-34-5p X + 9358380 9358474 3'utr BCL7-like FlyBase G45474.1 AGTAAACCTCTTTATAGTACACTTACCAACATAAATGTGACATTAACATTTAACTGCCAGCAGGGCGCGAAAAATATGCAAATGTTCGCTGAAGA 15 9358429 0.969032796 6 14 84 1 1.431363764 0.444444444 0.466666667 0.703703704 15 0 0 27 X:9358380-9358474 7 15.5 4649 FBgn0026149 221.2233333 16.18333333 24.75 0.070064942 0.957775489 0.626262626 3 3 3 0.15 dme-miR-92b-3p 6mer3-8 GTGCAA X 9358810 9358815 - X_9358810_9358815_- 0.997381863 0.99998481 0.998683337 0.001840528 mgl FBtr0343369 9358494 9360313 X - 9358791 9358937 3'utr mgl FlyBase G66012.1 ATATATAAATATTTTATTTTTTAATTATATCATCGATTTATGAATTGTATTATGATTTATGATTTATCTTTCTCTTCGAAAGTCGAAATGTGTGTGCATTTTTTTTTTCATTTTCGTTCTCTGTGCAAAATCTGTGCTTCCCTTCAT 54 9358806 0.985338275 19 48 562 0.897058824 1.484299839 0.382352941 0.203703704 0.367647059 54 6 1 61 X:9358791-9358937 6 mgl FBtr0343369 9358494 9360313 GTGCAA 6mer3-8 dme-miR-92b-3p X - 9358774 9358864 3'utr mgl FlyBase G49711.1 CTTCGAAAGTCGAAATGTGTGTGCATTTTTTTTTTCATTTTCGTTCTCTGTGCAAAATCTGTGCTTCCCTTCATTTAAGCGTGTTTTAGCA 39 9358806 0.989924429 13 37 365 0.962962963 1.716003344 0.240740741 0.307692308 0.5 39 2 0 52 X:9358774-9358864 6 36.5 4650 FBgn0261260 1607.083333 11.89333333 18.17 0.022711952 3.068946188 2.008805724 -9 -9 -9 0.15 dme-miR-282-5p 6mer2-7 GAGGCT X 939244 939249 + X_939244_939249_+ 0.996617233 0.996157311 0.996387272 0.000325198 CG32815 FBtr0307181|FBtr0345512 938011|938011 939424|939424 X + 939220 939259 3'utr CG32815 FlyBase G57881.1 TACAGAGTAAGTTACGCAAAGTATGAGGCTTGCATTTACA 13 939244 0.852187287 3 13 73 1 1.204119983 0 0.153846154 0.3125 13 0 0 16 X:939220-939259 6 CG32815 FBtr0345512|FBtr0307181 938011|938011 939424|939424 GAGGCT 6mer2-7 dme-miR-282-5p X + 939228 939254 3'utr CG32815 FlyBase G43788.1 AAGTTACGCAAAGTATGAGGCTTGCAT 5 939243 0.657457466 2 5 23 1 0.903089987 0 0.6 0.75 5 0 0 8 X:939228-939254 6 9 4651 FBgn0052815 22.11333333 0.906666667 1.36 0.406994272 9.926470588 6.617647059 0 1 0.5 0.15 dme-miR-79-3p 7mer-m8 TAGCTTT X 939309 939315 - X_939309_939315_- 0.619742563 0.617985436 0.618863999 0.001242528 CG3704 FBtr0070188 939168 939463 X - 939277 939368 3'utr CG3704 FlyBase G63941.1 GTGTGTTCGTCACTTGCACCTCCGATATTTGGTTTGTATATATGGACTTAGTTTAGCTTTGCAAATTAGTGATAACATATACATATGGAGGA 43 939303 0.924611062 12 41 418 0.98245614 1.748188027 0.140350877 0.186046512 0.385964912 43 1 0 56 X:939277-939368 7 CG3704 FBtr0070188 939168 939463 TAGCTTT 7mer-m8 dme-miR-79-3p X - 939255 939385 3'utr CG3704 FlyBase G48199.1 AAAACATTCAATATAGTGTGTGTTCGTCACTTGCACCTCCGATATTTGGTTTGTATATATGGACTTAGTTTAGCTTTGCAAATTAGTGATAACATATACATATGGAGGATATATCCCGCTCGTAAATGTAA 44 939303 0.98851116 16 43 391 0.983870968 1.785329835 0.209677419 0.295454545 0.5 44 1 0 61 X:939255-939385 7 29 4652 FBgn0040346 168.8866667 13.69666667 21.07 0.171712786 2.11730348 1.376364499 -12 -12 -12 0.15 dme-miR-986-5p 6mer2-7 TTCGAG X 939417 939422 - X_939417_939422_- 0.997547343 0.998118627 0.997832985 0.00040397 CG3704 FBtr0070188 939168 939463 X - 939412 939465 stop_codon CG3704 FlyBase G63942.1 AAATGGGCGGATTGTGATCCTCGATGGCTATGGATTTCGTGATTTCGAGTTTTC 84 939441 0.76280874 11 81 720 0.981132075 2.017033339 0.528301887 0.226190476 0.386792453 84 2 0 104 X:939412-939465 6 CG3704 FBtr0070188 939168 939463 TTCGAG 6mer2-7 dme-miR-986-5p X - 939412 939472 stop_codon CG3704 FlyBase G48200.1 CAGCCGTAAATGGGCGGATTGTGATCCTCGATGGCTATGGATTTCGTGATTTCGAGTTTTC 61 939441 0.912546469 10 60 499 0.989130435 1.959041392 0.52173913 0.442622951 0.630434783 61 1 0 91 X:939412-939472 6 31.5 4653 FBgn0040346 168.8866667 13.69666667 21.07 0.186515612 2.299829642 1.495016611 19 19 19 0.15 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 942565 942570 + X_942565_942570_+ 0.89405062 0.87553761 0.884794115 0.013090668 mus81 FBtr0070170|FBtr0070170|FBtr0070170 942473|942473|942473 943229|943229|943229 X + 942519 942614 3'utr mus81 FlyBase G57884.1 GAGTTTATACATAAGTGAGAGAGAGAATACGTTGGACATTGAATAGTGTGATCTAGTCTAAGCCAAAAAATGTACAAGTCAGCCGCCCTTAGATGT 264 942551 0.751229806 15 256 1614 0.969491525 2.155336037 0.122033898 0.117870722 0.213559322 263 8 1 286 X:942519-942614 6 mus81 FBtr0070170|FBtr0070170|FBtr0070170 942473|942473|942473 943229|943229|943229 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X + 942482 942600 3'utr mus81 FlyBase G43791.1 AATTGATTTTATGGGACATATCTAAGGTTATATACACGAGTTTATACATAAGTGAGAGAGAGAATACGTTGGACATTGAATAGTGTGATCTAGTCTAAGCCAAAAAATGTACAAGTCAG 203 942551 0.976842124 16 195 1264 0.950331126 2.156851901 0.132450331 0.36453202 0.572847682 203 14 1 287 X:942482-942600 6 99 4654 FBgn0040347 59.78 3.366666667 5.13 1.656072265 29.40594059 19.29824561 14 14 14 0.15 dme-miR-1012-3p 6mer3-8 TTGACT X 9555679 9555684 - X_9555679_9555684_- 0.999960053 0.936954948 0.9684575 0.044551404 CG15317 FBtr0071371 9555605 9555781 X - 9555634 9555707 3'utr CG15317 FlyBase G66070.1 TTATATATTAACTAACTGAGCTATTGACTTTTATTATAAAAATGTTACGTATATTTTCTGTGCAGCTCCAGCAG 179 9555677 0.8096055 11 177 1726 0.99122807 2.354108439 0.171052632 0.189944134 0.364035088 179 2 0 226 X:9555634-9555707 6 CG15317 FBtr0071371 9555605 9555781 TTGACT 6mer3-8 dme-miR-1012-3p X - 9555662 9555701 3'utr CG15317 FlyBase G49742.1 ATTAACTAACTGAGCTATTGACTTTTATTATAAAAATGTT 125 9555677 0.613556923 5 124 1201 0.989189189 2.26245109 0.259459459 0.368 0.572972973 125 2 0 183 X:9555662-9555701 6 148 4655 FBgn0030137 41 6.273333333 9.553333333 3.609756098 23.59192349 15.49197488 -7 -7 -7 0.15 dme-miR-252-5p 8mer-A1 GTACTTAA X 9571917 9571924 - X_9571917_9571924_- 0.492157733 0.492207581 0.492182657 3.53E-05 CG32699 FBtr0110850 9571535 9573007 X - 9571858 9571948 3'utr CG32699 FlyBase G66082.1 GATCTAAACGACAGAGCACAGCCTGTACTTAAGTCAAGCCATCTTGGGCACACCCCAACCTCTCACACAGTCTGTTCTAAATATGTTATAA 21 9571925 0.98101319 4 20 108 0.961538462 1.096910013 0.230769231 0.19047619 0.346153846 21 0 1 25 X:9571858-9571948 8 CG32699 FBtr0110850 9571535 9573007 GTACTTAA 8mer-A1 dme-miR-252-5p X - 9571899 9571942 3'utr CG32699 FlyBase G49748.1 AACGACAGAGCACAGCCTGTACTTAAGTCAAGCCATCTTGGGCA 16 9571925 0.974578716 2 16 66 1 1.380211242 0.083333333 0.3125 0.541666667 16 0 0 24 X:9571899-9571942 8 16.5 4656 FBgn0052699 2538.573333 91.48333333 141.3333333 0.006499714 0.180360721 0.116745283 1 1 1 0.15 dme-miR-1006-3p 7mer-A1 GAATTTA X 9572113 9572119 - X_9572113_9572119_- 0.823176658 0.80630172 0.814739189 0.011932427 CG32699 FBtr0110850 9571535 9573007 X - 9572098 9572131 3'utr CG32699 FlyBase G66083.1 ATTGCTGAATTTGAATTTAAGGATCTCCGATCTG 7 9572115 0.845304947 5 7 54 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 X:9572098-9572131 7 CG32699 FBtr0110850 9571535 9573007 GAATTTA 7mer-A1 dme-miR-1006-3p X - 9572094 9572119 3'utr CG32699 FlyBase G49749.1 GAATTTAAGGATCTCCGATCTGTTGT 5 9572115 0.70810413 3 3 40 0.833333333 0.698970004 0.833333333 0.2 0.333333333 5 1 0 5 X:9572094-9572119 7 6 4657 FBgn0052699 2538.573333 91.48333333 141.3333333 0.002363532 0.065585717 0.04245283 -4 -4 -4 0.15 dme-miR-282-5p 6mer3-8 AGAGGC X 9572584 9572589 - X_9572584_9572589_- 0.921199877 0.998978002 0.960088939 0.054997422 CG32699 FBtr0110850 9571535 9573007 X - 9572571 9572625 3'utr CG32699 FlyBase G66085.1 ACTTAGAGGATATATAAACATGTATGTATCTCATTTAGAGGCAGGCAAATCAAAC 68 9572601 0.702815361 8 65 557 0.963414634 1.596597096 0.06097561 0.205882353 0.341463415 68 2 1 79 X:9572571-9572625 6 CG32699 FBtr0110850 9571535 9573007 AGAGGC 6mer3-8 dme-miR-282-5p X - 9572576 9572628 3'utr CG32699 FlyBase G49751.1 AAAACTTAGAGGATATATAAACATGTATGTATCTCATTTAGAGGCAGGCAAAT 53 9572601 0.814712527 6 51 445 0.973333333 1.86332286 0.026666667 0.320754717 0.52 53 2 0 73 X:9572576-9572628 6 43.5 4658 FBgn0052699 2538.573333 91.48333333 141.3333333 0.017135609 0.475496447 0.307783019 12 12 12 0.15 dme-miR-308-3p 7mer-m1 TGTGATT X 9572664 9572670 - X_9572664_9572670_- 0.52066186 0.521004981 0.52083342 0.000242608 CG32699 FBtr0110850 9571535 9573007 X - 9572643 9572691 3'utr CG32699 FlyBase G66086.1 AAACGCAAGTCATTTCATCTTTGTGATTCTTATTATACACAACTATGTT 77 9572671 0.682805888 9 68 881 0.913978495 1.452297671 0.021505376 0.184210526 0.333333333 76 6 2 85 X:9572643-9572691 7 CG32699 FBtr0110850 9571535 9573007 TGTGATT 7mer-m1 dme-miR-308-3p X - 9572649 9572773 3'utr CG32699 FlyBase G49752.1 AGTTTCATGTGAACAAATGCTCACAGCACATAGATCCGGATCTGATTGCGCCCAGCTATGTTATTATTTATACTCGGACTCCAAACGCAAGTCATTTCATCTTTGTGATTCTTATTATACACAAC 86 9572671 0.928619987 15 81 724 0.952830189 1.402261382 0.094339623 0.197674419 0.349056604 86 2 3 101 X:9572649-9572773 7 59 4659 FBgn0052699 2538.573333 91.48333333 141.3333333 0.023241401 0.644926216 0.41745283 1 1 1 0.15 dme-miR-184-5p 6mer3-8 TGATAA X 9588828 9588833 + X_9588828_9588833_+ 0.999907968 0.912263842 0.956085905 0.061973808 Hex-A FBtr0333335 9587843 9589813 X + 9588759 9588844 3'utr Hex-A FlyBase G60169.1 CTAGGTAATGCTACGGTGTCCTTTCTGTAATTGTAAATGTTTATATAGAACCTATTACGAAGCGTTATATGATAATACTGCATACA 18 9588824 0.703602259 11 17 145 0.952380952 1.301029996 0.095238095 0.166666667 0.285714286 18 1 0 20 X:9588759-9588844 6 Hex-A FBtr0333335 9587843 9589813 TGATAA 6mer3-8 dme-miR-184-5p X + 9588756 9588837 3'utr Hex-A FlyBase G45490.1 TTACTAGGTAATGCTACGGTGTCCTTTCTGTAATTGTAAATGTTTATATAGAACCTATTACGAAGCGTTATATGATAATACT 18 9588823 0.802294235 9 15 131 0.823529412 1.447158031 0.294117647 0.611111111 0.794117647 18 6 0 28 X:9588756-9588837 6 8 4660 FBgn0001186 1183.94 43.5 66.29 0.006757099 0.183908046 0.120681852 4 5 4.5 0.15 dme-miR-1007-3p 6mer3-8 TGAGCT X 9589018 9589023 + X_9589018_9589023_+ 0.877133179 0.930334623 0.903733901 0.037619071 Hex-A FBtr0333335 9587843 9589813 X + 9588976 9589045 3'utr Hex-A FlyBase G60171.1 AAACTGTTTTTTTTTTTCCTTTTGATATAGAAACGCACTTTGTGAGCTATTATTTATGTAATTGTACATT 99 9589015 0.984468024 11 96 766 0.975 1.591064607 0.033333333 0.202020202 0.341666667 99 1 2 117 X:9588976-9589045 6 Hex-A FBtr0333335 9587843 9589813 TGAGCT 6mer3-8 dme-miR-1007-3p X + 9588945 9589042 3'utr Hex-A FlyBase G45492.1 ACACTTAAGCAGGTAAACTCTAAACAAAAATAAACTGTTTTTTTTTTTCCTTTTGATATAGAAACGCACTTTGTGAGCTATTATTTATGTAATTGTAC 56 9589015 0.987737718 14 53 472 0.92 1.537819095 0.053333333 0.214285714 0.413333333 56 5 1 69 X:9588945-9589042 6 71.5 4661 FBgn0001186 1183.94 43.5 66.29 0.060391574 1.643678161 1.078594056 3 3 3 0.15 dme-miR-184-3p 7mer-A1 CCGTCCA X 9604044 9604050 + X_9604044_9604050_+ 0.820190706 0.821074254 0.82063248 0.0006248 Gga FBtr0071363 9604012 9604280 X + 9603978 9604069 stop_codon Gga FlyBase G60182.1 TCGATTGTGGCCAAAGGCATTGACTATGTGGACTAAAATACCCCGACATATAAGTATCACCCGCTCCCGTCCACTGAAAGCGCAGGAGGAAA 125 9604042 0.94823978 8 121 529 0.967532468 1.395035018 0.474025974 0.192 0.344155844 125 0 5 149 X:9603978-9604069 7 Gga FBtr0071363 9604012 9604280 CCGTCCA 7mer-A1 dme-miR-184-3p X + 9604029 9604268 3'utr Gga FlyBase G45496.1 AAGTATCACCCGCTCCCGTCCACTGAAAGCGCAGGAGGAAAATGAAAAGAACGAAAGACAGTCAATTTTCCCGCATCTATGTTGTGCTCCCCATTATCTTAAAGATACTTTTGGTTTTTCAATTTCTGTATTGTATGTGTATGTACGCTGATAAGATTTTTATTCAAATTGCATTTTGCATACAAACGATTTAGTCGTAATATAATTATGTATCAAAGGTTTATAAATTATGAAAAAGTC 98 9604042 0.952880804 17 94 443 0.95 2.123851641 0.514285714 0.316326531 0.521428571 98 7 0 133 X:9604029-9604268 7 91 4662 FBgn0030141 373.9333333 19.18333333 29.23 0.243358888 4.743701129 3.113239822 2 2 2 0.15 dme-miR-305-5p 7mer-m1 GTACAAT X 9604477 9604483 - X_9604477_9604483_- 0.757425275 0.76558666 0.761505968 0.005770981 Lst8 FBtr0071368 9604152 9604877 X - 9604467 9604529 3'utr Lst8 FlyBase G66103.1 AATTACGATCTATCTTAAGCCAGTTAAATCAACAAATATCTCAGATGTACAATCATCCGCAAA 9 9604501 0.975704172 6 8 50 0.888888889 0.903089987 0 0 0 9 1 0 8 X:9604467-9604529 7 Lst8 FBtr0071368 9604152 9604877 GTACAAT 7mer-m1 dme-miR-305-5p X - 9604468 9604502 3'utr Lst8 FlyBase G49764.1 ATCAACAAATATCTCAGATGTACAATCATCCGCAA 5 9604483 0.972030232 4 4 24 0.909090909 1 0 0.8 0.909090909 5 1 0 10 X:9604468-9604502 7 5.5 4663 FBgn0264691 581.5666667 40.63666667 62.58666667 0.009457213 0.135345747 0.087878142 18 0 9 0.15 dme-miR-283-5p 7mer-m8 TGATATT X 9621673 9621679 + X_9621673_9621679_+ 0.36315123 0.387002939 0.375077084 0.016865699 CG42797 FBtr0332963|FBtr0303708|FBtr0303709|FBtr0303710 9621666|9621666|9621666|9621666 9622441|9622441|9622166|9623243 X + 9621600 9621700 stop_codon CG42797 FlyBase G60188.1 CACCCGAACTGCTGTACGAGAAGCTGCTGCTGGCCGTCGAGGAGACCAACACGTTCGGCATTGAGTAGACACGTGATATTGCACCCACATACACATACACA 88 9621679 0.960154471 10 84 411 0.966101695 1.579783597 0.059322034 0.284090909 0.466101695 88 2 2 114 X:9621600-9621700 7 CG42797 FBtr0303710|FBtr0303709|FBtr0303708|FBtr0332963 9621666|9621666|9621666|9621666 9623243|9622166|9622441|9622441 TGATATT 7mer-m8 dme-miR-283-5p X + 9621649 9621700 stop_codon CG42797 FlyBase G45500.1 CACGTTCGGCATTGAGTAGACACGTGATATTGCACCCACATACACATACACA 59 9621679 0.755135479 4 58 255 0.988636364 1.638489257 0.011363636 0.389830508 0.590909091 59 0 1 87 X:9621649-9621700 7 70 4664 FBgn0261931 415.6266667 8.42 12.89333333 0.168420377 8.313539192 5.429162358 -6 -6 -6 0.15 dme-miR-965-3p 6mer2-7 ACGCTT X 9621751 9621756 + X_9621751_9621756_+ 0.999999998 0.999999986 0.999999992 0 CG42797 FBtr0332963|FBtr0303708|FBtr0303709|FBtr0303710 9621666|9621666|9621666|9621666 9622441|9622441|9622166|9623243 X + 9621732 9621775 5'utr CG42797 FlyBase G60189.1 ACACAAAACACGCGCCTAAACGCTTTATTTCGATTTTAGAAGTT 29 9621748 0.97936369 4 27 188 0.90625 1.462397998 0.1875 0.103448276 0.1875 29 3 0 29 X:9621732-9621775 6 CG42797 FBtr0303710|FBtr0303709|FBtr0303708|FBtr0332963 9621666|9621666|9621666|9621666 9623243|9622166|9622441|9622441 ACGCTT 6mer2-7 dme-miR-965-3p X + 9621728 9621767 5'utr CG42797 FlyBase G45501.1 AGATACACAAAACACGCGCCTAAACGCTTTATTTCGATTT 12 9621748 0.969116415 4 12 70 1 1.204119983 0 0.25 0.4375 12 0 0 16 X:9621728-9621767 6 20.5 4665 FBgn0261931 415.6266667 8.42 12.89333333 0.04932311 2.434679335 1.589968976 3 3 3 0.15 dme-miR-1002-5p 6mer3-8 CTACTT X 9622176 9622181 + X_9622176_9622181_+ 0.56998408 0.866845411 0.718414746 0.209912638 CG42797 FBtr0332963|FBtr0303708|FBtr0303710 9621666|9621666|9621666 9622441|9622441|9623243 X + 9622153 9622225 5'utr-coding CG42797 FlyBase G60191.1 ATGCCTAGCCATAGACAGACTTGCTACTTTAGGCATGGCATCCCACTAGTTTGTAGACAATTTGCCTTCGCCT 7 9622181 0.973934829 6 6 44 0.875 0.84509804 0.125 0.142857143 0.25 7 1 0 7 X:9622153-9622225 6 CG42797 FBtr0303710|FBtr0303708|FBtr0332963 9621666|9621666|9621666 9623243|9622441|9622441 CTACTT 6mer2-7 dme-miR-968-5p X + 9622133 9622193 5'utr-coding CG42797 FlyBase G45503.1 CAAAATTGTAAAGCAAATAAATGCCTAGCCATAGACAGACTTGCTACTTTAGGCATGGCAT 6 9622175 0.965650451 6 6 32 1 1.079181246 0 0.5 0.75 6 0 0 12 X:9622133-9622193 6 4 4666 FBgn0261931 415.6266667 8.42 12.89333333 0.009624022 0.475059382 0.310237849 -5 1 -2 0.15 dme-miR-1012-3p 6mer3-8 TTGACT X 9622346 9622351 + X_9622346_9622351_+ 0.877436225 0.996141261 0.936788743 0.083937181 CG42797 FBtr0332963|FBtr0303708|FBtr0303710 9621666|9621666|9621666 9622441|9622441|9623243 X + 9622239 9622370 3'utr CG42797 FlyBase G60192.1 ATTGAATGGAAGTTACCTCAAGAGCAAAACGGCTTGCCAGCGCCGCCAGTCATTAGTCCTAAGATCTACACGCCCCCGGATAATTTCTAAGCCTAAGTATCCTTCGCTTGACTCTGCCTGATTTACACTCGA 27 9622352 0.979009938 13 24 166 0.90625 0.985276743 0.03125 0.185185185 0.3125 27 1 2 29 X:9622239-9622370 6 CG42797 FBtr0303710|FBtr0303708|FBtr0332963 9621666|9621666|9621666 9623243|9622441|9622441 TTGACT 6mer3-8 dme-miR-1012-3p X + 9622328 9622364 3'utr CG42797 FlyBase G45505.1 AGCCTAAGTATCCTTCGCTTGACTCTGCCTGATTTAC 9 9622342 0.747596645 7 9 70 1 1.113943352 0.538461538 0.444444444 0.615384615 9 0 0 13 X:9622328-9622364 6 10 4667 FBgn0261931 415.6266667 8.42 12.89333333 0.024060054 1.187648456 0.775594623 -6 4 -1 0.15 dme-miR-968-5p 8mer-A1 ACTACTTA X 9623132 9623139 + X_9623132_9623139_+ 0.527506963 0.607368788 0.567437875 0.05647082 CG42797 FBtr0303710 9621666 9623243 X + 9623027 9623139 3'utr CG42797 FlyBase G60196.2 TTACATGTATTTTTGGCATTAGTTAATACGGAAAGCGACGGAGATGGAGAGAGACAGAGCTAAAGGCAGTGAAAGAGACAGAGAAAGAAAGATAACGCTTTTTGAACTACTTA 152 9623127 0.946362888 11 126 441 0.921348315 1.913813852 0.224719101 0.157894737 0.280898876 152 13 1 164 X:9623027-9623139 8 CG42797 FBtr0303710 9621666 9623243 ACTACTTA 8mer-A1 dme-miR-968-5p X + 9623050 9623132 3'utr CG42797 FlyBase G45509.1 TAATACGGAAAGCGACGGAGATGGAGAGAGACAGAGCTAAAGGCAGTGAAAGAGACAGAGAAAGAAAGATAACGCTTTTTGAA 89 9623127 0.94349867 7 77 226 0.916666667 1.605664116 0.318181818 0.393258427 0.590909091 89 9 2 121 X:9623050-9623132 1 24.5 4668 FBgn0261931 415.6266667 8.42 12.89333333 0.058947132 2.909738717 1.900206825 5 5 5 0.15 dme-miR-283-5p 6mer3-8 TGATAT X 9628972 9628977 - X_9628972_9628977_- 0.888153826 0.740053262 0.814103544 0.104722868 l(1)G0232 FBtr0071405|FBtr0333427|FBtr0071406|FBtr0100193|FBtr0071407|FBtr0100192|FBtr0303559|FBtr0071404|FBtr0303558 9628720|9628720|9628720|9626293|9626292|9628720|9628720|9628720|9626293 9629105|9629105|9629105|9629105|9629105|9629105|9629105|9629105|9629105 X - 9628956 9628999 3'utr l(1)G0232 FlyBase G66119.1 TCGACTAGATAGATGTTCGTCCTGATATGATATAATATGGTATA 11 9628977 0.980432118 5 11 73 1 1.278753601 0 0.636363636 0.789473684 11 0 0 19 X:9628956-9628999 6 l(1)G0232 FBtr0100193|FBtr0071406|FBtr0333427|FBtr0071405|FBtr0303558|FBtr0071404|FBtr0303559|FBtr0071407|FBtr0100192 9626293|9628720|9628720|9628720|9626293|9628720|9628720|9626292|9628720 9629105|9629105|9629105|9629105|9629105|9629105|9629105|9629105|9629105 TGATAT 6mer3-8 dme-miR-283-5p X - 9628950 9629015 3'utr l(1)G0232 FlyBase G49777.1 GGAGTTGTAACTTTCTTCGACTAGATAGATGTTCGTCCTGATATGATATAATATGGTATATATGAT 16 9628977 0.972570574 10 15 129 0.956521739 1.041392685 0.217391304 0.3125 0.52173913 16 0 1 22 X:9628950-9629015 6 11.5 4669 FBgn0028341 422.0033333 16.54 25.49666667 0.02725097 0.69528416 0.451039352 0 0 0 0.15 dme-miR-308-3p 7mer-m1 TGTGATT X 9666507 9666513 - X_9666507_9666513_- 0.521223266 0.521221694 0.52122248 1.13E-06 nej FBtr0333521|FBtr0302723 9665671|9665440 9669706|9669706 X - 9666501 9666544 3'utr nej FlyBase G66134.1 AGAGAAAGAGAGAGCATATTCCAAAACTATTTGTGATTACAATT 22 9666515 0.968020355 5 22 123 1 1.462397998 0.172413793 0.272727273 0.448275862 22 0 0 29 X:9666501-9666544 7 nej FBtr0333521|FBtr0302723 9665671|9665440 9669706|9669706 TGTGATT 7mer-m1 dme-miR-308-3p X - 9666467 9666543 3'utr nej FlyBase G49788.1 GAGAAAGAGAGAGCATATTCCAAAACTATTTGTGATTACAATTATATATGATGATGATGAAGAGGAAGAAAGCGGAA 26 9666514 0.976159546 7 25 161 0.972972973 1.255272505 0.135135135 0.346153846 0.540540541 26 0 1 36 X:9666467-9666543 7 16.5 4670 FBgn0261617 2552.683333 20.01666667 30.83666667 0.006463786 0.824313072 0.535077289 2 1 1.5 0.15 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA X 9667476 9667481 - X_9667476_9667481_- 0.994425653 0.568288045 0.781356849 0.301324857 nej FBtr0333521|FBtr0333521|FBtr0302723|FBtr0302723 9665671|9665671|9665440|9665440 9669706|9669706|9669706|9669706 X - 9667410 9667491 3'utr nej FlyBase G66138.1 ATTTACCGATTACTTACTGATAGGTGTAGTAGGTCACTCGTACGCGAAAGTTGGTTAAATCCAATGCCTAGTTCGTAAGCCG 14 9667480 0.984048475 8 14 116 1 1.278753601 0.421052632 0.357142857 0.526315789 14 0 0 19 X:9667410-9667491 6 nej FBtr0333521|FBtr0333521|FBtr0302723|FBtr0302723 9665671|9665671|9665440|9665440 9669706|9669706|9669706|9669706 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" X - 9667408 9667486 3'utr nej FlyBase G49789.1 CCGATTACTTACTGATAGGTGTAGTAGGTCACTCGTACGCGAAAGTTGGTTAAATCCAATGCCTAGTTCGTAAGCCGAG 10 9667476 0.973016997 8 10 61 1 1.230448921 0.411764706 0.3 0.588235294 10 0 0 17 X:9667408-9667486 6 5 4671 FBgn0261617 2552.683333 20.01666667 30.83666667 0.001958723 0.24979184 0.162144633 -1 -5 -3 0.15 dme-miR-34-5p 6mer3-8 CACTGC X 9667624 9667629 - X_9667624_9667629_- 0.996901649 0.999662595 0.998282122 0.001952322 nej FBtr0333521|FBtr0302723 9665671|9665440 9669706|9669706 X - 9667593 9667700 3'utr nej FlyBase G66139.1 GACAGCAAGAGAGCGAGACAGTAGATGAGCAGGAGAGGATTTTGTAAATTTTAGATACTAGGATACTTATTCACTGCGCATAAAAATGCCTTCAATTGCGACATCAGC 20 9667613 0.959421575 7 20 107 1 1.431363764 0.37037037 0.35 0.518518519 20 0 0 27 X:9667593-9667700 6 nej FBtr0333521|FBtr0302723 9665671|9665440 9669706|9669706 CACTGC 6mer3-8 dme-miR-34-5p X - 9667594 9667693 3'utr nej FlyBase G49790.1 AGAGAGCGAGACAGTAGATGAGCAGGAGAGGATTTTGTAAATTTTAGATACTAGGATACTTATTCACTGCGCATAAAAATGCCTTCAATTGCGACATCAG 19 9667614 0.964004892 8 19 105 1 1.414973348 0.153846154 0.315789474 0.5 19 0 0 26 X:9667594-9667693 6 10 4672 FBgn0261617 2552.683333 20.01666667 30.83666667 0.003917446 0.49958368 0.324289266 -16 -15 -15.5 0.15 dme-miR-305-3p 7mer-m8 ATGTGCC X 9668813 9668819 - X_9668813_9668819_- 0.674515621 0.674501978 0.6745088 9.62E-06 nej FBtr0333521|FBtr0302723 9665671|9665440 9669706|9669706 X - 9668795 9668828 3'utr nej FlyBase G66145.1 ATAGTGAACATGTGCCTGTTGGCGATCGGCAGTT 8 9668818 0.696456039 4 8 48 1 1 0 0.125 0.3 8 0 0 10 X:9668795-9668828 7 nej FBtr0333521|FBtr0302723 9665671|9665440 9669706|9669706 ATGTGCC 7mer-m8 dme-miR-305-3p X - 9668797 9668837 3'utr nej FlyBase G49797.1 ATATAGCCTATAGTGAACATGTGCCTGTTGGCGATCGGCAG 5 9668818 0.936083545 3 4 33 0.833333333 0.698970004 0 0.2 0.333333333 5 1 0 5 X:9668797-9668837 7 6 4673 FBgn0261617 2552.683333 20.01666667 30.83666667 0.002350468 0.299750208 0.19457356 -1 -1 -1 0.15 dme-miR-278-3p 6mer3-8 CCCACC X 9669409 9669414 - X_9669409_9669414_- 0.766924326 0.999994454 0.88345939 0.164805519 nej FBtr0333521|FBtr0302723 9665671|9665440 9669706|9669706 X - 9669295 9669454 3'utr nej FlyBase G66149.2 AACAAATATCGCGCCTAATGTGTACTGTAGATTAAGATGACCCACCATTACAACCACTAACAAATACCTTATTATTTAAGTTTAAGACGAAAGTTGGACAGAGCATTATGATTCGATTTCCATTTTATGTCCGCGATTTAGCAAATATATAATATCATAT 62 9669435 0.823744238 25 56 420 0.876712329 1.806179974 0.136986301 0.14516129 0.273972603 62 9 0 64 X:9669295-9669454 6 nej FBtr0333521|FBtr0302723 9665671|9665440 9669706|9669706 CCCACC 6mer3-8 dme-miR-278-3p X - 9669303 9669448 3'utr nej FlyBase G49799.2 TATCGCGCCTAATGTGTACTGTAGATTAAGATGACCCACCATTACAACCACTAACAAATACCTTATTATTTAAGTTTAAGACGAAAGTTGGACAGAGCATTATGATTCGATTTCCATTTTATGTCCGCGATTTAGCAAATATATAA 41 9669435 0.981871535 15 39 276 0.968253968 1.785329835 0.26984127 0.365853659 0.587301587 41 2 0 61 X:9669303-9669448 6 6.5 4674 FBgn0261617 2552.683333 20.01666667 30.83666667 0.00254634 0.324729392 0.210788023 21 21 21 0.15 dme-miR-14-3p 7mer-A1 AGACTGA X 9669618 9669624 - X_9669618_9669624_- 0.823348432 0.823349532 0.823348982 7.78E-07 nej FBtr0333521|FBtr0302723|FBtr0071402|FBtr0302722 9665671|9665440|9669513|9669513 9669706|9669706|9669706|9669706 X - 9669529 9669660 5'utr nej FlyBase G66150.1 ATGGTTGGTAGGCGATGTGGCTAGAGGGCTAGGGCTAGACTGAATGAATGAATGAGTGTCCAGTAGCCGCAGACGGGATGACGACGAAGACCAACCGGCAGGGATAACCAGTGTGTGTTAAGCGAATTAACA 53 9669625 0.904449717 15 49 208 0.925373134 1.792391689 0.373134328 0.226415094 0.388059701 53 5 0 62 X:9669529-9669660 7 nej FBtr0071402|FBtr0302722|FBtr0333521|FBtr0302723 9669513|9669513|9665671|9665440 9669706|9669706|9669706|9669706 AGACTGA 7mer-A1 dme-miR-14-3p X - 9669569 9669664 5'utr nej FlyBase G49801.1 TACAATGGTTGGTAGGCGATGTGGCTAGAGGGCTAGGGCTAGACTGAATGAATGAATGAGTGTCCAGTAGCCGCAGACGGGATGACGACGAAGACC 42 9669625 0.93079366 9 41 155 0.985074627 1.819543936 0.343283582 0.380952381 0.611940299 42 1 0 66 X:9669569-9669664 7 31 4675 FBgn0261617 2552.683333 20.01666667 30.83666667 0.012144084 1.548709409 1.005296725 1 1 1 0.2 dme-miR-92b-3p 7mer-A1 TGCAATA 2L 10008039 10008045 + 2L_10008039_10008045_+ 0.531423703 0.38742185 0.459422776 0.10182472 CG4747 FBtr0079930|FBtr0303902 10007765|10007765 10008889|10008889 2L + 10007994 10008097 3'utr CG4747 FlyBase G3638.1 AACCTTCTGCATCTTCCCCAATCGCCCCATATGCAAAGCGTTTAATGCAATATGTCTACGATTCGCCGGGAATCGCAGAACCGTGTCGTCCTGCTTTCAACGCA 13 10008036 0.855021413 10 12 71 0.941176471 1.204119983 0.117647059 0.307692308 0.470588235 13 1 0 16 2L:10007994-10008097 7 CG4747 FBtr0079930|FBtr0303902 10007765|10007765 10008889|10008889 TGCAATA 7mer-A1 dme-miR-92b-3p 2L + 10008025 10008049 3'utr CG4747 FlyBase G2873.1 TGCAAAGCGTTTAATGCAATATGTC 4 10008038 0.716668906 2 3 20 0.857142857 0.77815125 0.428571429 0.5 0.714285714 4 1 0 6 2L:10008025-10008049 7 3.5 1 FBgn0043456 4161.81 159.8633333 245.0833333 0.00084098 0.021893701 0.014280857 3 1 2 0.2 dme-miR-305-5p 7mer-A1 GTACAAA 2L 10008362 10008368 + 2L_10008362_10008368_+ 0.781530426 0.781340111 0.781435269 0.000134562 CG4747 FBtr0079930|FBtr0303902 10007765|10007765 10008889|10008889 2L + 10008342 10008391 3'utr CG4747 FlyBase G3640.1 ATACTGCATCCGAATAAAATGTACAAAGCATACTTGTGAAAGACAACGCC 10 10008361 0.930338526 4 9 35 0.916666667 0.740362689 0.083333333 0.2 0.333333333 10 0 1 11 2L:10008342-10008391 7 CG4747 FBtr0079930|FBtr0303902 10007765|10007765 10008889|10008889 GTACAAA 7mer-A1 dme-miR-305-5p 2L + 10008331 10008373 3'utr CG4747 FlyBase G2874.1 AAGTGTATAGAATACTGCATCCGAATAAAATGTACAAAGCATA 6 10008358 0.865282217 3 5 18 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2L:10008331-10008373 7 7 2 FBgn0043456 4161.81 159.8633333 245.0833333 0.00168196 0.043787402 0.028561714 1 4 2.5 0.2 dme-miR-184-3p 6mer3-8 TCCGTC 2L 10011984 10011989 + 2L_10011984_10011989_+ 0.99457829 0.991932859 0.993255575 0.00187058 Trp1 FBtr0305986|FBtr0343741 10011911|10011911 10012118|10012118 2L + 10011956 10012010 3'utr Trp1 FlyBase G3649.1 CGAATTTGTATTTATAATTTCTTTTATTTCCGTCGAACTTTTGGTTGTATGTTTT 220 10011983 0.748555056 9 220 2429 1 2.440909082 0.054347826 0.190909091 0.355072464 220 0 0 276 2L:10011956-10012010 6 Trp1 FBtr0305986|FBtr0343741 10011911|10011911 10012118|10012118 TCCGTC 6mer3-8 dme-miR-184-3p 2L + 10011962 10012010 3'utr Trp1 FlyBase G2880.1 TGTATTTATAATTTCTTTTATTTCCGTCGAACTTTTGGTTGTATGTTTT 158 10011983 0.757499048 10 156 1705 0.982300885 2.045322979 0.088495575 0.310126582 0.517699115 158 3 1 222 2L:10011962-10012010 6 188 3 FBgn0011584 1171.806667 85.36666667 131.8133333 0.160436022 2.20226474 1.426259357 1 1 1 0.2 dme-miR-276a-3p 6mer2-7 GTTCCT 2L 10012081 10012086 + 2L_10012081_10012086_+ 0.999959978 0.999720649 0.999840313 0.000169281 Trp1 FBtr0305986|FBtr0343741 10011911|10011911 10012118|10012118 2L + 10012025 10012102 3'utr Trp1 FlyBase G3650.1 ATATTGAATAGCGCAAAAGACATACATTAACTTTAGCTTTTAATTGTAAATCCTTTGTTCCTTAATAAATATTATTGT 26 10012079 0.993348097 9 26 317 1 1.505149978 0.125 0.230769231 0.375 26 0 0 32 2L:10012025-10012102 6 Trp1 FBtr0305986|FBtr0343741 10011911|10011911 10012118|10012118 GTTCCT 6mer2-7 dme-miR-276a-3p 2L + 10012026 10012098 3'utr Trp1 FlyBase G2881.1 TATTGAATAGCGCAAAAGACATACATTAACTTTAGCTTTTAATTGTAAATCCTTTGTTCCTTAATAAATATTA 21 10012079 0.992228769 8 19 213 0.870967742 1.431363764 0.225806452 0.380952381 0.580645161 21 4 0 27 2L:10012026-10012098 6 17 4 FBgn0011584 1171.806667 85.36666667 131.8133333 0.014507513 0.199140961 0.128970261 2 2 2 0.2 dme-miR-1003-3p 8mer-A1 ATGTGAGA 2L 10013106 10013113 + 2L_10013106_10013113_+ 0.437616218 0.384096618 0.410856418 0.037844072 Trp1 FBtr0079931|FBtr0079932 10012492|10012492 10013170|10013170 2L + 10013080 10013120 3'utr Trp1 FlyBase G3652.1 AAATAAAGCTAGGCAATTCTGATCTGATGTGAGAGATATTT 50 10013099 0.613291843 6 45 346 0.907692308 1.071882007 0.369230769 0.28 0.446153846 50 2 4 59 2L:10013080-10013120 8 Trp1 FBtr0079931|FBtr0079932 10012492|10012492 10013170|10013170 ATGTGAGA 8mer-A1 dme-miR-1003-3p 2L + 10013065 10013120 3'utr Trp1 FlyBase G2883.1 AATTAACTATTATATAAATAAAGCTAGGCAATTCTGATCTGATGTGAGAGATATTT 53 10013099 0.622704741 8 50 341 0.915662651 1.880813592 0.313253012 0.396226415 0.614457831 53 7 0 76 2L:10013065-10013120 8 49 5 FBgn0011584 1171.806667 85.36666667 131.8133333 0.041815772 0.573994533 0.371737811 7 7 7 0.2 dme-miR-8-3p 6mer2-7 AGTATT 2L 10059923 10059928 + 2L_10059923_10059928_+ 0.664362655 0.999099956 0.831731305 0.236695015 Pen FBtr0079937 10059466 10060095 2L + 10059771 10060089 3'utr Pen FlyBase G3664.1 CGATGCAACCGCTCGGGCAGCTGCGCTGGCTGGGATCCGTGGATCATAGTATTTCCAGAATCCGTCTGTACAGGGGGCACCTTATGTTTGCGTGTACTAGGCTTTTTATTGGATACGTTTCGAGCTCATTTCGGATATATTTTAGGCTGTTTAGTATTTATTTATGTATACAGGAAACGCTTTTAATCCTCCACCTTCGCGCAAGCATTACAACAACAACAACAACAACAACAACTCATTCCCTTCACACCAGTGTCCTCATTCCCGAATCGCATGTTTATATTCAAAGTTGTCAATAAATAATGAATTGTTTGAATGA 200 10059912 0.991352418 49 185 1976 0.923728814 2.037426498 0.144067797 0.175 0.300847458 200 17 1 218 2L:10059771-10060089 6 Pen FBtr0079937 10059466 10060095 AGTATT 6mer2-7 dme-miR-8-3p 2L + 10059663 10059977 3'utr Pen FlyBase G2896.1 TGGCAAAATCCACTCGCATGAATCCCCATTTAACATACCCGTATTCCTCGCGTTAGACTAGACTTCACAGATTGCAGCATGGATCTTTCTGGCAGTGTTCCTCGTTCACGATGCAACCGCTCGGGCAGCTGCGCTGGCTGGGATCCGTGGATCATAGTATTTCCAGAATCCGTCTGTACAGGGGGCACCTTATGTTTGCGTGTACTAGGCTTTTTATTGGATACGTTTCGAGCTCATTTCGGATATATTTTAGGCTGTTTAGTATTTATTTATGTATACAGGAAACGCTTTTAATCCTCCACCTTCGCGCAAGCA 153 10059912 0.988965294 44 142 1391 0.919491525 1.336459734 0.084745763 0.405228758 0.61440678 153 10 9 217 2L:10059663-10059977 6 64 6 FBgn0267727 3642.156667 171.07 261.8833333 0.017572006 0.374115859 0.244383631 11 11 11 0.2 dme-miR-305-5p 6mer3-8 AGTACA 2L 10114 10119 - 2L_10114_10119_- 0.953802578 0.924998336 0.939400457 0.020367716 l(2)gl FBtr0078168|FBtr0306591|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0306590|FBtr0078170|FBtr0330655|FBtr0078171|FBtr0306592|FBtr0078166 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11214|11214|11214|11214|11309|11214|11214|11214 2L - 10108 10152 3'utr l(2)gl FlyBase G6257.1 TGAGAAGTAAGTTAATGAGCCTTCAAGTACTTTAGTACATAATGT 25 10137 0.747475541 5 23 187 0.961538462 1.096910013 0.269230769 0.04 0.076923077 25 0 1 25 2L:10108-10152 6 l(2)gl FBtr0306592|FBtr0306590|FBtr0078166|FBtr0330655|FBtr0078171|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0078170|FBtr0078168|FBtr0306591 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11309|11214|11214|11214|11214|11214|11214|11214 AGTACA 6mer3-8 dme-miR-305-5p 2L - 10108 10152 3'utr l(2)gl FlyBase G4879.1 TGAGAAGTAAGTTAATGAGCCTTCAAGTACTTTAGTACATAATGT 13 10121 0.637309891 6 13 93 1 1.322219295 0.142857143 0.461538462 0.666666667 13 0 0 21 2L:10108-10152 6 12.5 7 FBgn0002121 6538.69 148.3266667 227.85 0.001911698 0.08427345 0.054860654 18 2 10 0.2 dme-bantam-3p 6mer2-7 GATCTC 2L 102021 102026 + 2L_102021_102026_+ 0.995502859 0.998575157 0.997039008 0.002172444 Zir FBtr0078103 101917 102086 2L + 101952 102079 3'utr Zir FlyBase G440.1 ATCATACTTTTGGTCTTTCATGTCTAGCGTATCGGATTATTTTAAGTAAATCTTACATTTTAAATTATCGATCTCTATAATTGCTAATGTAATAGCATAACTTTTTTATGCATCTAATAGATTAAGCA 152 102029 0.990765267 18 144 1487 0.952380952 1.954242509 0.259259259 0.171052632 0.333333333 152 8 1 180 2L:101952-102079 6 Zir FBtr0078103 101917 102086 GATCTC 6mer2-7 dme-bantam-3p 2L + 101991 102079 3'utr Zir FlyBase G370.1 TTTTAAGTAAATCTTACATTTTAAATTATCGATCTCTATAATTGCTAATGTAATAGCATAACTTTTTTATGCATCTAATAGATTAAGCA 107 102029 0.974162651 13 97 1051 0.905660377 1.857332496 0.182389937 0.38317757 0.58490566 107 14 1 144 2L:101991-102079 6 122.5 8 FBgn0031216 988 18.33333333 28.1 0.123987854 6.681818182 4.359430605 -8 -8 -8 0.2 dme-miR-34-5p 8mer-A1 CACTGCCA 2L 10202680 10202687 - 2L_10202680_10202687_- 0.678168871 0.678125597 0.678147234 3.06E-05 CG34159 FBtr0112350 10202518 10202882 2L - 10202635 10202704 3'utr CG34159 FlyBase G9506.1 AAAAAACGATTTAAATCCACTGCCAGCTGAAAGGCAAACCATGATTCAATAAAGTGTACATTGGCAAACG 41 10202689 0.9615275 7 39 196 0.957446809 1.653212514 0.319148936 0.146341463 0.255319149 41 2 0 45 2L:10202635-10202704 8 CG34159 FBtr0112350 10202518 10202882 CACTGCCA 8mer-A1 dme-miR-34-5p 2L - 10202613 10202703 3'utr CG34159 FlyBase G7375.1 AAAAACGATTTAAATCCACTGCCAGCTGAAAGGCAAACCATGATTCAATAAAGTGTACATTGGCAAACGATTTTTATCCCTGGCACCCTGA 15 10202689 0.970356615 5 12 69 0.782608696 0.954242509 0.304347826 0.4 0.608695652 15 4 1 18 2L:10202613-10202703 8 25 9 FBgn0085188 482 64.53 98.53333333 0.05186722 0.387416705 0.253721245 2 2 2 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 2L 10204785 10204790 - 2L_10204785_10204790_- 0.999990822 0.999998036 0.999994429 5.09E-06 CG5734 FBtr0079960 10204755 10205368 2L - 10204764 10204827 3'utr CG5734 FlyBase G9509.1 CTAAACAATGAACTATGAATGTACATTCCCTTATCTGTTGACTCACTTCCAAATAAATGACAAA 21 10204790 0.990806718 8 19 191 0.92 0.884606581 0.04 0.142857143 0.28 21 0 2 23 2L:10204764-10204827 6 CG5734 FBtr0079960 10204755 10205368 TTGACT 6mer3-8 dme-miR-1012-3p 2L - 10204758 10204818 3'utr CG5734 FlyBase G7377.1 GAACTATGAATGTACATTCCCTTATCTGTTGACTCACTTCCAAATAAATGACAAAAATGTT 16 10204790 0.969612823 8 14 138 0.904761905 1.278753601 0.238095238 0.3125 0.476190476 16 2 0 19 2L:10204758-10204818 6 16 10 FBgn0032191 425.53 23.29666667 35.42 0.037600169 0.686793533 0.451722191 0 0 0 0.2 dme-bantam-3p 6mer3-8 TGATCT 2L 10205018 10205023 - 2L_10205018_10205023_- 0.999992057 0.914508023 0.95725004 0.060446387 CG5734 FBtr0079960 10204755 10205368 2L - 10204970 10205034 3'utr CG5734 FlyBase G9510.1 ACTATTGTAAATGATCTGTAAATGGATGCTCGACGGATACTTTTATCTCTTTTATCATTTCTTGT 17 10205023 0.7975538 8 16 164 0.947368421 0.954242509 0 0.117647059 0.210526316 17 0 1 18 2L:10204970-10205034 6 CG5734 FBtr0079960 10204755 10205368 TGATCT 6mer3-8 dme-bantam-3p 2L - 10204979 10205031 3'utr CG5734 FlyBase G7379.1 ATTGTAAATGATCTGTAAATGGATGCTCGACGGATACTTTTATCTCTTTTATC 20 10205012 0.764931139 6 19 144 0.9375 1.477121255 0.125 0.4 0.625 20 2 0 30 2L:10204979-10205031 6 15 11 FBgn0032191 425.53 23.29666667 35.42 0.035250159 0.643868937 0.423489554 0 -11 -5.5 0.2 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 10243 10248 - 2L_10243_10248_- 0.88204854 0.823717012 0.852882776 0.041246599 l(2)gl FBtr0078168|FBtr0306591|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0306590|FBtr0078170|FBtr0330655|FBtr0078171|FBtr0306592|FBtr0078166 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11214|11214|11214|11214|11309|11214|11214|11214 2L - 10221 10293 3'utr l(2)gl FlyBase G6258.1 TATTTAATTCTTTGGCTAATACGTCAGTTAAAAAAGGCTACATTTTGATGATACTCACAAATGTAATTTTTGC 52 10245 0.751064451 6 46 396 0.901639344 1.439332694 0.098360656 0.134615385 0.262295082 52 5 1 55 2L:10221-10293 6 l(2)gl FBtr0306592|FBtr0306590|FBtr0078166|FBtr0330655|FBtr0078171|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0078170|FBtr0078168|FBtr0306591 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11309|11214|11214|11214|11214|11214|11214|11214 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L - 10196 10262 3'utr l(2)gl FlyBase G4880.1 AAAAGGCTACATTTTGATGATACTCACAAATGTAATTTTTGCATTCTACACAGGTGCAATTAAAAAA 23 10245 0.983430263 3 22 169 0.948717949 1.568201724 0.102564103 0.47826087 0.692307692 23 2 0 37 2L:10196-10262 6 35 12 FBgn0002121 6538.69 148.3266667 227.85 0.005352754 0.235965661 0.153609831 -3 -3 -3 0.2 dme-miR-1006-3p 7mer-A1 GAATTTA 2L 10256920 10256926 - 2L_10256920_10256926_- 0.822986601 0.813982077 0.818484339 0.006367143 Pten FBtr0089905|FBtr0089901 10256317|10256317 10257117|10257117 2L - 10256912 10256960 5'utr Pten FlyBase G9592.1 GATCGATTACAGCTGCGCTCTGCACATCTGTTTAGAATTTAATGTACAT 9 10256931 0.977496252 7 9 66 1 1.041392685 0.181818182 0.222222222 0.363636364 9 0 0 11 2L:10256912-10256960 7 Pten FBtr0089905|FBtr0089901 10256317|10256317 10257117|10257117 GAATTTA 7mer-A1 dme-miR-1006-3p 2L - 10256917 10256962 5'utr Pten FlyBase G7439.1 ACGATCGATTACAGCTGCGCTCTGCACATCTGTTTAGAATTTAATG 8 10256931 0.980928934 5 8 59 1 0.903089987 0.125 0 0 8 0 0 8 2L:10256917-10256962 7 4 13 FBgn0026379 759.45 36.16 55.47 0.00526697 0.110619469 0.072111051 5 5 5 0.2 dme-bantam-3p 6mer2-7 GATCTC 2L 10257077 10257082 - 2L_10257077_10257082_- 0.838182231 0.809562525 0.823872378 0.020237184 Pten FBtr0089905|FBtr0089901 10256317|10256317 10257117|10257117 2L - 10257060 10257119 stop_codon Pten FlyBase G9594.1 AATCACCCGAGACGATTTAAAAGACTTCTGGCTGAACGATCTCTTAATTTTGATGTATAA 180 10257075 0.658411447 12 175 1275 0.972972973 2.033423755 0.238738739 0.211111111 0.36036036 180 5 1 216 2L:10257060-10257119 6 Pten FBtr0089905|FBtr0089901 10256317|10256317 10257117|10257117 GATCTC 6mer2-7 dme-bantam-3p 2L - 10257057 10257119 stop_codon Pten FlyBase G7440.2 AATCACCCGAGACGATTTAAAAGACTTCTGGCTGAACGATCTCTTAATTTTGATGTATAAAAC 156 10257075 0.669734764 12 151 1092 0.978070175 2.047274867 0.210526316 0.320512821 0.535087719 156 4 1 223 2L:10257057-10257119 6 129.5 14 FBgn0026379 759.45 36.16 55.47 0.170518138 3.58130531 2.334595277 -7 -7 -7 0.2 dme-miR-33-5p 6mer3-8 CAATGC 2L 10262064 10262069 - 2L_10262064_10262069_- 0.967767814 0.786024731 0.876896272 0.128511778 Rsf1 FBtr0333411 10261793 10262815 2L - 10262056 10262085 3'utr Rsf1 FlyBase G9605.1 ACGGCAAAAATCTAGCCAATGCTGCAAGCA 7 10262066 0.726989354 2 7 20 1 1.041392685 0 0.571428571 0.727272727 7 0 0 11 2L:10262056-10262085 6 Rsf1 FBtr0333411 10261793 10262815 CAATGC 6mer3-8 dme-miR-33-5p 2L - 10262057 10262100 3'utr Rsf1 FlyBase G7452.1 TGTAGTTGGGTCGAAACGGCAAAAATCTAGCCAATGCTGCAAGC 7 10262066 0.91261008 3 6 24 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 2L:10262057-10262100 6 6 15 FBgn0011305 436.02 51.88333333 79.38333333 0.013760837 0.115644073 0.075582616 -3 -3 -3 0.2 "dme-miR-995-3p,dme-miR-998-3p" 6mer2-7 GGTGCT 2L 10311174 10311179 - 2L_10311174_10311179_- 0.977958846 0.710400691 0.844179768 0.189192147 l(2)SH0834 FBtr0080062 10311048 10311329 2L - 10311163 10311221 3'utr l(2)SH0834 FlyBase G9702.1 AAAACAACCACCATTGCGTTTTCAGCACTGGCAGCGACTTTAGGTGCTGTACAGCACTG 14 10311181 0.961338805 5 14 74 1 1.204119983 0 0.071428571 0.1875 14 0 0 16 2L:10311163-10311221 6 l(2)SH0834 FBtr0080062 10311048 10311329 GGTGCT 6mer2-7 "dme-miR-995-3p,dme-miR-998-3p" 2L - 10311172 10311203 3'utr l(2)SH0834 FlyBase G7519.1 TTTTCAGCACTGGCAGCGACTTTAGGTGCTGT 6 10311181 0.858038448 2 6 30 1 1.113943352 0 0.666666667 0.846153846 6 0 0 13 2L:10311172-10311203 6 6.5 16 FBgn0267365 353.5433333 47.94666667 74.01666667 0.018385299 0.135567297 0.087818059 2 2 2 0.2 dme-miR-92b-3p 7mer-m1 TGCAATT 2L 10338710 10338716 + 2L_10338710_10338716_+ 0.540248559 0.674030325 0.607139442 0.094597947 GATAd FBtr0333098 10338407 10339185 2L + 10338633 10338733 3'utr GATAd FlyBase G3782.1 AAATTGAACCAGTATGTCAAAACTTTTAAATAATATCACACTAAATATAGACCTTAAGAGAGGACATCAATACTTAATGCAATTAAATTAAAAATAAAATT 53 10338705 0.974643649 10 51 344 0.970588235 1.819543936 0.014705882 0.226415094 0.397058824 53 2 0 66 2L:10338633-10338733 7 GATAd FBtr0333098 10338407 10339185 TGCAATT 7mer-m1 dme-miR-92b-3p 2L + 10338676 10338727 3'utr GATAd FlyBase G2993.1 AATATAGACCTTAAGAGAGGACATCAATACTTAATGCAATTAAATTAAAAAT 30 10338706 0.668591608 6 26 203 0.787234043 1.568201724 0 0.333333333 0.574468085 30 10 0 37 2L:10338676-10338727 7 38 17 FBgn0032223 1151.333333 44.42 68.51 0.033005211 0.855470509 0.554663553 5 4 4.5 0.2 dme-miR-8-3p 7mer-m8 CAGTATT 2L 10338765 10338771 + 2L_10338765_10338771_+ 0.661087992 0.66094205 0.661015021 0.000103238 GATAd FBtr0333098 10338407 10339185 2L + 10338740 10338788 3'utr GATAd FlyBase G3783.1 ATTTATATTTATTAAAACCATTTTACAGTATTTTTAATTTTTTAATAAC 17 10338762 0.770127933 7 15 206 0.952380952 1.301029996 0 0.176470588 0.333333333 17 1 0 20 2L:10338740-10338788 7 GATAd FBtr0333098 10338407 10339185 CAGTATT 7mer-m8 dme-miR-8-3p 2L + 10338740 10338785 3'utr GATAd FlyBase G2994.1 ATTTATATTTATTAAAACCATTTTACAGTATTTTTAATTTTTTAAT 8 10338761 0.96382894 3 6 85 0.818181818 0.954242509 0 0.375 0.545454545 8 2 0 9 2L:10338740-10338785 7 11.5 18 FBgn0032223 1151.333333 44.42 68.51 0.009988419 0.258892391 0.167858707 3 4 3.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 10338915 10338921 + 2L_10338915_10338921_+ 0.751666338 0.750564459 0.751115398 0.00077909 GATAd FBtr0333098|FBtr0333098|FBtr0333098 10338407|10338407|10338407 10339185|10339185|10339185 2L + 10338870 10338942 3'utr GATAd FlyBase G3784.1 CTAAAAAATAATAATGTTTTAAATCTCTTGCCTATACGAAAATCATGTGATAATATAATAATCTCCACAAAAC 49 10338912 0.909228285 10 46 316 0.954545455 1.799340549 0 0.265306122 0.454545455 49 3 0 63 2L:10338870-10338942 7 GATAd FBtr0333098|FBtr0333098|FBtr0333098 10338407|10338407|10338407 10339185|10339185|10339185 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 10338819 10338939 3'utr GATAd FlyBase G2995.1 AGTTTTAACAATGATTTTTCAGCTGTCTTTGCAATTGAACAACTTCTAAAGCTAAAAAATAATAATGTTTTAAATCTCTTGCCTATACGAAAATCATGTGATAATATAATAATCTCCACAA 40 10338912 0.980032957 11 37 264 0.965517241 1.748188027 0 0.325 0.534482759 40 2 0 56 2L:10338819-10338939 7 37.5 19 FBgn0032223 1151.333333 44.42 68.51 0.032570932 0.844214318 0.547365348 3 3 3 0.2 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2L 10392262 10392267 + 2L_10392262_10392267_+ 0.982394467 0.950049654 0.96622206 0.022871227 da FBtr0332195|FBtr0332196|FBtr0080008 10392193|10392193|10392193 10393228|10392728|10392787 2L + 10392218 10392278 3'utr da FlyBase G3839.1 CTGGAAATCGTCGTCGTCCCTCTCTTCCATAAAAACCGAATGTATTGAAGGCTCCGCGGCC 11 10392258 0.854687359 7 9 56 0.933333333 1.146128036 0.066666667 0.181818182 0.4 11 1 0 14 2L:10392218-10392278 6 da FBtr0080008|FBtr0332195|FBtr0332196 10392193|10392193|10392193 10392787|10393228|10392728 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2L + 10392226 10392282 3'utr da FlyBase G3035.1 CGTCGTCGTCCCTCTCTTCCATAAAAACCGAATGTATTGAAGGCTCCGCGGCCAAGT 6 10392263 0.950861397 5 6 27 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2L:10392226-10392282 6 4 20 FBgn0000413 2154.396667 82.52666667 127.39 0.001856668 0.048469182 0.031399639 4 -1 1.5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2L 10402800 10402805 + 2L_10402800_10402805_+ 0.999996627 0.999999298 0.999997963 1.91E-06 Cnot4 FBtr0331638|FBtr0304112 10402769|10402769 10403206|10403206 2L + 10402746 10402832 stop_codon Cnot4 FlyBase G3859.1 TTTAAAAAGCCGTCAATTCGTTTAGCTACAATACATATAAATAATACATTTGTTTACCTGTACTCTTTATTAAATATTTCTTAAAGT 25 10402806 0.974140162 8 24 271 1 1.531478917 0 0.32 0.5 25 0 0 34 2L:10402746-10402832 6 Cnot4 FBtr0331638|FBtr0080014|FBtr0304112|FBtr0080013|FBtr0304113|FBtr0080010|FBtr0080012|FBtr0331639|FBtr0331637|FBtr0080009|FBtr0080011 10402769|10402769|10402769|10402769|10402769|10402769|10402769|10402769|10402769|10402769|10402769 10403206|10402882|10403206|10402882|10402882|10402882|10402882|10402882|10402882|10402882|10402882 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2L + 10402788 10402812 3'utr Cnot4 FlyBase G3051.1 AATACATTTGTTTACCTGTACTCTT 6 10402798 0.648814865 3 6 57 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2L:10402788-10402812 6 13.5 21 FBgn0051716 2626.393333 88.17666667 135.32 0.005140129 0.153101728 0.099763523 -6 2 -2 0.2 dme-miR-14-3p 6mer2-7 AGACTG 2L 10403152 10403157 + 2L_10403152_10403157_+ 0.593685237 0.998637267 0.796161252 0.286344376 Cnot4 FBtr0331638|FBtr0304112 10402769|10402769 10403206|10403206 2L + 10403120 10403161 3'utr Cnot4 FlyBase G3861.1 AGCAAAGAAAACCTCGTGATGTGAAATTATCGAGACTGTGTA 8 10403141 0.952754272 5 8 37 1 1.041392685 0.181818182 0.375 0.545454545 8 0 0 11 2L:10403120-10403161 6 Cnot4 FBtr0331638|FBtr0304112 10402769|10402769 10403206|10403206 AGACTG 6mer2-7 dme-miR-14-3p 2L + 10403126 10403171 3'utr Cnot4 FlyBase G3052.1 GAAAACCTCGTGATGTGAAATTATCGAGACTGTGTAAAAATGTCAA 9 10403147 0.97316529 6 9 55 1 1.079181246 0.083333333 0.222222222 0.416666667 9 0 0 12 2L:10403126-10403171 6 6 22 FBgn0051716 2626.393333 88.17666667 135.32 0.002284502 0.068045212 0.044339344 11 5 8 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 2L 104098 104104 - 2L_104098_104104_- 0.52120515 0.521223298 0.521214224 1.29E-05 Nhe1 FBtr0301452 103960 104472 2L - 104079 104166 3'utr Nhe1 FlyBase G6295.1 AAAGCACACTACGTCAGTAATTTTAGTTAAAAATATTTATTCATACGAATATATGCTGTATTTGTGATTTTATACATTTTTGAAACCA 191 104105 0.992929741 16 182 2151 0.960869565 1.742332282 0.126086957 0.183246073 0.32173913 191 6 3 221 2L:104079-104166 7 Nhe1 FBtr0301452 103960 104472 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 104081 104130 3'utr Nhe1 FlyBase G4915.1 TTATTCATACGAATATATGCTGTATTTGTGATTTTATACATTTTTGAAAC 131 104105 0.595449411 9 123 1487 0.945355191 1.635986112 0.202185792 0.34351145 0.530054645 131 7 3 173 2L:104081-104130 7 155 23 FBgn0026787 273.9133333 13.01 19.93 0.565872417 11.91391238 7.777220271 1 1 1 0.2 dme-miR-7-5p 6mer3-8 GTCTTC 2L 104190 104195 - 2L_104190_104195_- 0.820914983 0.810506177 0.81571058 0.007360133 Nhe1 FBtr0301452 103960 104472 2L - 104169 104258 3'utr Nhe1 FlyBase G6296.1 TCGTATCACTGTAGCTCCTTTATTAATCCGCTTAAAGCAGTATTACATTGCACACGACAGATGGTCTTCAAAATGAAAATTTGGACGTCA 12 104197 0.985675634 8 11 81 0.875 1.146128036 0 0.333333333 0.5 12 2 0 14 2L:104169-104258 6 Nhe1 FBtr0301452 103960 104472 GTCTTC 6mer3-8 dme-miR-7-5p 2L - 104168 104258 3'utr Nhe1 FlyBase G4916.1 TCGTATCACTGTAGCTCCTTTATTAATCCGCTTAAAGCAGTATTACATTGCACACGACAGATGGTCTTCAAAATGAAAATTTGGACGTCAC 19 104197 0.971953748 7 17 132 0.961538462 1.397940009 0.230769231 0.368421053 0.538461538 19 1 0 25 2L:104168-104258 6 7 24 FBgn0026787 273.9133333 13.01 19.93 0.025555529 0.538047656 0.351229303 2 2 2 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2L 10420744 10420750 - 2L_10420744_10420750_- 0.55996735 0.511870557 0.535918953 0.034009503 pie FBtr0080046|FBtr0333490 10420709|10420623 10420827|10420827 2L - 10420726 10420774 3'utr pie FlyBase G9792.1 GTGGGAATTAATTCGTCATAGAATTCTAGTCTCTTTATGCATATATTGT 81 10420751 0.823378966 6 80 765 1 1.991226076 0.112244898 0.185185185 0.326530612 81 0 0 98 2L:10420726-10420774 7 pie FBtr0080046|FBtr0333490 10420709|10420623 10420827|10420827 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2L - 10420739 10420774 3'utr pie FlyBase G7582.1 GTGGGAATTAATTCGTCATAGAATTCTAGTCTCTTT 66 10420751 0.820491423 3 63 577 0.965909091 1.929418926 0.170454545 0.257575758 0.443181818 66 3 0 85 2L:10420739-10420774 7 72 25 FBgn0005683 197.3333333 11.90333333 18.10333333 0.364864865 6.048725847 3.977168109 1 1 1 0.2 dme-miR-317-5p 6mer3-8 GTATCC 2L 10428292 10428297 + 2L_10428292_10428297_+ 0.634217492 0.652522307 0.6433699 0.012943448 KdelR FBtr0080023 10427808 10428632 2L + 10428271 10428373 3'utr KdelR FlyBase G3892.1 TAAATAGCTCTTAAGTCGACTGTATCCTAAAAATCCGAGTAAAGTTAAGTCTTATTGTGTGGCTAATAGTAAAGTAAATGATGAGCGATGTCAACATATAATA 36 10428293 0.738596182 13 34 268 0.930232558 1.602059991 0.093023256 0.166666667 0.302325581 36 3 0 40 2L:10428271-10428373 6 KdelR FBtr0080023 10427808 10428632 GTATCC 6mer3-8 dme-miR-317-5p 2L + 10428260 10428350 3'utr KdelR FlyBase G3080.1 AAGTTATGCATTAAATAGCTCTTAAGTCGACTGTATCCTAAAAATCCGAGTAAAGTTAAGTCTTATTGTGTGGCTAATAGTAAAGTAAATG 24 10428293 0.982830603 8 22 170 0.96969697 1.204119983 0.090909091 0.291666667 0.484848485 24 0 1 32 2L:10428260-10428350 6 18 26 FBgn0267330 1541.713333 135.1766667 206.4166667 0.011675322 0.133159076 0.087202261 -1 -1 -1 0.2 dme-miR-283-5p 7mer-A1 GATATTA 2L 10428606 10428612 + 2L_10428606_10428612_+ 0.470654386 0.469935929 0.470295158 0.000508056 KdelR FBtr0080023 10427808 10428632 2L + 10428585 10428622 3'utr KdelR FlyBase G3894.1 AATATTTTAAACACTTTTGCAGATATTATATTATAAAC 14 10428601 0.755408105 4 13 142 0.944444444 1.230448921 0 0.214285714 0.388888889 14 1 0 17 2L:10428585-10428622 7 KdelR FBtr0080023 10427808 10428632 GATATTA 7mer-A1 dme-miR-283-5p 2L + 10428585 10428628 3'utr KdelR FlyBase G3083.1 AATATTTTAAACACTTTTGCAGATATTATATTATAAACAAAGTA 13 10428601 0.768237436 4 13 135 1 1.113943352 0 0 0 13 0 0 13 2L:10428585-10428628 7 13.5 27 FBgn0267330 1541.713333 135.1766667 206.4166667 0.008756492 0.099869307 0.065401696 5 5 5 0.2 dme-miR-307a-3p 6mer3-8 GGTTGT 2L 104322 104327 - 2L_104322_104327_- 0.678619679 0.55640225 0.617510965 0.086420823 Nhe1 FBtr0301452 103960 104472 2L - 104304 104382 3'utr Nhe1 FlyBase G6297.1 GCTTAAGTTCCTCTAGTTAATATTTTTAGAGTTTTTATTTATATAGCGCGGTGATGGTTGTTATCTTGTGTATATTTTT 70 104328 0.797996234 12 69 647 0.988372093 1.929418926 0.127906977 0.185714286 0.337209302 70 1 0 85 2L:104304-104382 6 Nhe1 FBtr0301452 103960 104472 GGTTGT 6mer3-8 dme-miR-307a-3p 2L - 104306 104353 3'utr Nhe1 FlyBase G4917.1 AGTTTTTATTTATATAGCGCGGTGATGGTTGTTATCTTGTGTATATTT 56 104328 0.792436769 6 53 482 0.952380952 1.903089987 0.047619048 0.303571429 0.535714286 56 4 0 80 2L:104306-104353 6 60.5 28 FBgn0026787 273.9133333 13.01 19.93 0.220872782 4.650269024 3.035624686 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 10507952 10507959 - 2L_10507952_10507959_- 0.608330195 0.628241361 0.618285778 0.014079345 CG7384 FBtr0080135|FBtr0080135|FBtr0080135 10507857|10507857|10507857 10508086|10508086|10508086 2L - 10507919 10507969 3'utr CG7384 FlyBase G9821.1 CGTACAGAATCTGTGATAGTGCTAACCTGCAATGGCGTCCATAGCATAGTT 8 10507960 0.973488317 3 8 48 1 1.079181246 0.083333333 0.25 0.5 8 0 0 12 2L:10507919-10507969 8 CG7384 FBtr0080135|FBtr0080135|FBtr0080135 10507857|10507857|10507857 10508086|10508086|10508086 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 10507919 10507969 3'utr CG7384 FlyBase G7601.1 CGTACAGAATCTGTGATAGTGCTAACCTGCAATGGCGTCCATAGCATAGTT 6 10507937 0.869989424 2 4 38 0.666666667 0.77815125 0.333333333 0.5 0.666666667 6 3 0 6 2L:10507919-10507969 8 5.5 29 FBgn0032262 8.333333333 0.46 0.726666667 0.66 11.95652174 7.568807339 1 -22 -10.5 0.2 dme-miR-12-5p 7mer-A1 ATACTCA 2L 1051106 1051112 - 2L_1051106_1051112_- 0.822810471 0.823349165 0.823079818 0.000380918 S FBtr0077993 1049672 1052037 2L - 1051094 1051137 3'utr S FlyBase G6717.1 GCAAAATCTGCTTTCAACTCATCTCATACTCATAGTTACAACAT 16 1051111 0.743541404 5 15 139 0.941176471 1.204119983 0.235294118 0.0625 0.117647059 16 1 0 16 2L:1051094-1051137 7 S FBtr0077993 1049672 1052037 ATACTCA 7mer-A1 dme-miR-12-5p 2L - 1051099 1051138 3'utr S FlyBase G5253.1 TGCAAAATCTGCTTTCAACTCATCTCATACTCATAGTTAC 8 1051118 0.68791422 4 8 74 1 1.204119983 0 0.625 0.8125 8 0 0 16 2L:1051099-1051138 7 12 30 FBgn0003310 666.94 15.53666667 23.95 0.017992623 0.772366445 0.501043841 -1 6 2.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 10534 10540 - 2L_10534_10540_- 0.801264821 0.801386459 0.80132564 8.61E-05 l(2)gl FBtr0078168|FBtr0078168|FBtr0078168|FBtr0306591|FBtr0306591|FBtr0306591|FBtr0078169|FBtr0078169|FBtr0078169|FBtr0078167|FBtr0078167|FBtr0078167|FBtr0306589|FBtr0306589|FBtr0306589|FBtr0306590|FBtr0306590|FBtr0306590|FBtr0078170|FBtr0078170|FBtr0078170|FBtr0330655|FBtr0330655|FBtr0330655|FBtr0078171|FBtr0078171|FBtr0078171|FBtr0306592|FBtr0306592|FBtr0306592|FBtr0078166|FBtr0078166|FBtr0078166 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11309|11309|11309|11214|11214|11214|11214|11214|11214|11214|11214|11214 2L - 10484 10562 3'utr l(2)gl FlyBase G6260.1 CTTTTATTTTCGGTTAAAATATTGTGATACAAAAAAATGCCCTTACAAAATTAGGACAACAACAATTTGCTTTATTATG 220 10541 0.852784174 12 203 1415 0.926199262 1.195553739 0.520295203 0.195454545 0.346863469 220 5 15 251 2L:10484-10562 7 l(2)gl FBtr0306592|FBtr0306592|FBtr0306592|FBtr0306590|FBtr0306590|FBtr0306590|FBtr0078166|FBtr0078166|FBtr0078166|FBtr0330655|FBtr0330655|FBtr0330655|FBtr0078171|FBtr0078171|FBtr0078171|FBtr0078169|FBtr0078169|FBtr0078169|FBtr0078167|FBtr0078167|FBtr0078167|FBtr0306589|FBtr0306589|FBtr0306589|FBtr0078170|FBtr0078170|FBtr0078170|FBtr0078168|FBtr0078168|FBtr0078168|FBtr0306591|FBtr0306591|FBtr0306591 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11214|11214|11214|11214|11214|11214|11309|11309|11309|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 10513 10561 3'utr l(2)gl FlyBase G4883.1 TTTTATTTTCGGTTAAAATATTGTGATACAAAAAAATGCCCTTACAAAA 112 10541 0.695107335 6 103 724 0.909090909 1.273001272 0.557575758 0.357142857 0.563636364 112 8 7 150 2L:10513-10561 7 154 31 FBgn0002121 6538.69 148.3266667 227.85 0.023552118 1.03824891 0.675883257 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 10686409 10686414 - 2L_10686409_10686414_- 0.665354383 0.96148206 0.813418221 0.209393905 CG7296 FBtr0336850|FBtr0336850|FBtr0336850|FBtr0080129|FBtr0080129|FBtr0080129 10686122|10686122|10686122|10686389|10686389|10686389 10686461|10686461|10686461|10686461|10686461|10686461 2L - 10686390 10686438 3'utr CG7296 FlyBase G9830.1 TTGGAGTTAAGCGATAAGAAATGACTGTGAATAAAACCTAAATAAATTA 71 10686417 0.875728737 5 71 317 1 1.886490725 0.272727273 0.056338028 0.12987013 71 0 0 77 2L:10686390-10686438 6 CG7296 FBtr0336850|FBtr0336850|FBtr0336850|FBtr0080129|FBtr0080129|FBtr0080129 10686122|10686122|10686122|10686389|10686389|10686389 10686461|10686461|10686461|10686461|10686461|10686461 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 10686395 10686438 3'utr CG7296 FlyBase G7608.1 TTGGAGTTAAGCGATAAGAAATGACTGTGAATAAAACCTAAATA 41 10686417 0.836218124 4 40 176 0.981481481 1.72427587 0.185185185 0.243902439 0.425925926 41 1 0 53 2L:10686395-10686438 6 56 32 FBgn0032283 0 0 0 Inf Inf Inf 3 3 3 0.2 dme-miR-1003-3p 6mer2-7 TGTGAG 2L 10740454 10740459 + 2L_10740454_10740459_+ 0.968438283 0.957227739 0.962833011 0.007927091 CG12299 FBtr0080113 10740097 10740762 2L + 10740437 10740471 3'utr CG12299 FlyBase G3948.1 AAGATCAAAAGCGATTTTGTGAGCATTCCCAGTAC 9 10740453 0.674570334 2 9 62 1 1 0.1 0.111111111 0.2 9 0 0 10 2L:10740437-10740471 6 CG12299 FBtr0080113 10740097 10740762 TGTGAG 6mer2-7 dme-miR-1003-3p 2L + 10740431 10740469 3'utr CG12299 FlyBase G3121.1 AATCATAAGATCAAAAGCGATTTTGTGAGCATTCCCAGT 7 10740452 0.904794193 3 6 46 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 2L:10740431-10740469 6 8 33 FBgn0032295 396.6833333 14.49 22.2 0.02016722 0.5521049 0.36036036 1 2 1.5 0.2 dme-miR-33-5p 7mer-A1 AATGCAA 2L 1082999 1083005 + 2L_1082999_1083005_+ 0.651613506 0.619002122 0.635307814 0.023059742 Atg4a FBtr0332569|FBtr0077953 1082870|1082870 1085380|1083378 2L + 1082920 1083064 3'utr Atg4a FlyBase G955.1 AGCCCAGCCAGGCGAAAGTGGAGCACCCAATGAGGAGAAAGAGAGTGGGCCGGGAGGTCGAGCCCCTGCGGATGCTGCGAATGCAATAAACTAAGGCTAAAGTGCATAATTAGACGAGTGGTTGAGATTTAGATTTTAGTATGTT 70 1083011 0.962291889 14 68 345 0.975609756 1.602059991 0.268292683 0.157142857 0.280487805 70 1 1 80 2L:1082920-1083064 7 Atg4a FBtr0077953|FBtr0332569 1082870|1082870 1083378|1085380 AATGCAA 7mer-A1 dme-miR-33-5p 2L + 1082923 1083062 3'utr Atg4a FlyBase G769.1 CCAGCCAGGCGAAAGTGGAGCACCCAATGAGGAGAAAGAGAGTGGGCCGGGAGGTCGAGCCCCTGCGGATGCTGCGAATGCAATAAACTAAGGCTAAAGTGCATAATTAGACGAGTGGTTGAGATTTAGATTTTAGTATG 37 1083011 0.962104287 12 34 165 0.945454545 1.414973348 0.418181818 0.351351351 0.563636364 37 2 1 52 2L:1082923-1083062 7 34.5 34 FBgn0031298 484.5333333 26.74 40.88333333 0.071202532 1.290201945 0.843864656 -12 -12 -12 0.2 dme-miR-7-5p 7mer-m8 GTCTTCC 2L 10838165 10838171 - 2L_10838165_10838171_- 0.704531734 0.705714285 0.70512301 0.000836224 CG6700 FBtr0301710|FBtr0080187 10837858|10837730 10839315|10839315 2L - 10838145 10838225 3'utr CG6700 FlyBase G9859.1 CAAAATTATCGGAAGTTCAAACTCAACGTTTTGGAGTATGGCAAATTCAACCTGGTCTTCCCCGTCGCCACTAAACATCCG 14 10838168 0.695837135 6 13 83 0.875 1.146128036 0.0625 0.142857143 0.25 14 2 0 14 2L:10838145-10838225 7 CG6700 FBtr0301710|FBtr0080187 10837858|10837730 10839315|10839315 GTCTTCC 7mer-m8 dme-miR-7-5p 2L - 10838148 10838198 3'utr CG6700 FlyBase G7625.1 GTTTTGGAGTATGGCAAATTCAACCTGGTCTTCCCCGTCGCCACTAAACAT 8 10838168 0.977616939 2 8 61 1 1.041392685 0.090909091 0.25 0.454545455 8 0 0 11 2L:10838148-10838198 7 9 35 FBgn0032305 1004.78 26.73333333 40.84666667 0.008957185 0.336658354 0.220336217 -3 -3 -3 0.2 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 2L 10839257 10839264 - 2L_10839257_10839264_- 0.67496713 0.674964861 0.674965996 1.56E-06 CG6700 FBtr0301710|FBtr0080187 10837858|10837730 10839315|10839315 2L - 10839045 10839288 3'utr CG6700 FlyBase G9865.1 TGGCATGAAGCCCTATTCGATTTTGTACCTGATTTCCGAGCTTTTCGGATGTTAGTGTCCTTTTTCGGACTGCGGATGCAACTCTCTTGGCCCTGTTTAAAAATTTGTGTATATATTTCTCTAGATCGCGATTCCCTTTCGTTACAAAGTTAGGACTTGAATTACTCCCATTCTTAGGCTGAAGTCTTCGCTTATTTAGGACCAACTGTTCTTCGTAGGGTTTAAAGTTTTTAGATGGAAAATA 304 10839265 0.988364088 32 297 2794 0.980874317 2.254064453 0.163934426 0.174342105 0.31420765 304 6 1 359 2L:10839045-10839288 8 CG6700 FBtr0301710|FBtr0080187 10837858|10837730 10839315|10839315 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2L - 10839237 10839283 3'utr CG6700 FlyBase G7631.1 TGAAGCCCTATTCGATTTTGTACCTGATTTCCGAGCTTTTCGGATGT 116 10839265 0.699534517 11 113 1170 0.971428571 2.230448921 0.177142857 0.379310345 0.588571429 116 5 0 170 2L:10839237-10839283 8 137.5 36 FBgn0032305 1004.78 26.73333333 40.84666667 0.136845877 5.143391521 3.366247756 1 1 1 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA 2L 10847252 10847259 - 2L_10847252_10847259_- 0.6130414 0.615585577 0.614313488 0.001799021 porin FBtr0080183|FBtr0305260 10847225|10847225 10847867|10847867 2L - 10847237 10847272 3'utr porin FlyBase G9878.1 TACCTTTTCGTTGTGCATTTACCTGAGAAATAAATC 26 10847255 0.730343129 3 26 191 1 1.602059991 0.275 0.346153846 0.575 26 0 0 40 2L:10847237-10847272 8 porin FBtr0305260|FBtr0080183 10847225|10847225 10847867|10847867 TGCATTTA 8mer-A1 dme-miR-277-3p 2L - 10847242 10847278 3'utr porin FlyBase G7636.1 AATCTTTACCTTTTCGTTGTGCATTTACCTGAGAAAT 17 10847255 0.742718784 3 17 139 1 1.361727836 0.347826087 0.352941176 0.52173913 17 0 0 23 2L:10847242-10847278 8 21.5 37 FBgn0004363 5030.653333 426.6133333 653.96 0.004273799 0.050396925 0.032876629 -4 -4 -4 0.2 dme-miR-277-3p 6mer3-8 TGCATT 2L 10856854 10856859 - 2L_10856854_10856859_- 0.999621525 0.997877285 0.998749405 0.001233336 aurB FBtr0080180 10856795 10856872 2L - 10856827 10856865 3'utr aurB FlyBase G9895.1 CGAGTTTGCATTGTGTAACGACTTATTTCAGATTTTACT 15 10856852 0.681237911 6 14 134 0.944444444 1.230448921 0.833333333 0.133333333 0.277777778 15 1 0 17 2L:10856827-10856865 6 aurB FBtr0080180 10856795 10856872 TGCATT 6mer3-8 dme-miR-277-3p 2L - 10856828 10856864 3'utr aurB FlyBase G7648.1 GAGTTTGCATTGTGTAACGACTTATTTCAGATTTTAC 9 10856839 0.898906544 5 7 91 0.785714286 1.041392685 0.357142857 0.444444444 0.642857143 9 3 0 11 2L:10856828-10856864 6 9 38 FBgn0024227 390.6033333 40.1 60.70333333 0.023041278 0.224438903 0.148262039 -7 -20 -13.5 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2L 10981725 10981731 + 2L_10981725_10981731_+ 0.690903704 0.585899716 0.63840171 0.07424904 SCAR FBtr0305255|FBtr0305256|FBtr0329949|FBtr0340223|FBtr0080148 10981664|10981664|10981664|10981664|10981664 10982293|10982395|10982395|10982395|10981854 2L + 10981708 10981770 stop_codon SCAR FlyBase G3987.1 AAAAAGAAGAAGTAATTCCAAAGAGAATTAATCCATACGATGGTCGAAACCAAGCGTGGTATG 64 10981723 0.685091898 4 63 203 0.987654321 1.903089987 0.086419753 0.203125 0.37037037 64 1 0 80 2L:10981708-10981770 7 SCAR FBtr0329949|FBtr0305255|FBtr0340223|FBtr0305256 10981664|10981664|10981664|10981664 10982395|10982293|10982395|10982395 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2L + 10981622 10981768 stop_codon SCAR FlyBase G3146.1 ACGACAGCGAGGGCTGGATGGAACCGAACGAAACATCGGCTTGATCCCTGATTAACTCGTTAAAGCCTGACATAATTCTAAAAAACAAAAAGAAGAAGTAATTCCAAAGAGAATTAATCCATACGATGGTCGAAACCAAGCGTGGTA 49 10981723 0.934655962 9 48 182 1 1.880813592 0.026315789 0.408163265 0.618421053 49 0 0 76 2L:10981622-10981768 7 49 39 FBgn0041781 1138.273333 48.57333333 74.31 0.043047657 1.008783969 0.659399812 2 2 2 0.2 dme-miR-277-3p 7mer-m8 TGCATTT 2L 10981930 10981936 + 2L_10981930_10981936_+ 0.468748016 0.616854068 0.542801042 0.104726828 SCAR FBtr0305255|FBtr0329950|FBtr0305256|FBtr0329949|FBtr0340223 10981664|10981721|10981664|10981664|10981664 10982293|10982395|10982395|10982395|10982395 2L + 10981849 10982118 3'utr SCAR FlyBase G3988.2 AAAATCAAAAGTTTCATTGAATTGTATATACACCAACGAGTAATTATCGTTAAATTAATCGCTATAGTGAACGAACGCATTTGCATTTTAAGCCTAGACGACAATCCAAGGAAAGCGATTTAAAAGACTTGCTAATTTTGTTCGCTTCTTTGGAGTCAAGGTCTGAGTAGATATGGGCTTCTGTATCATAGTAGTCGGTGTTTGGATATTAAATTATAAATAATCGATATTATCACTGAACTCAATCCTACCCCAACTTGCAATCGATAC 112 10981929 0.983048478 24 105 795 0.939393939 1.394451681 0.21969697 0.151785714 0.28030303 112 4 4 124 2L:10981849-10982118 7 SCAR FBtr0329949|FBtr0305255|FBtr0340223|FBtr0305256|FBtr0329950 10981664|10981664|10981664|10981664|10981721 10982395|10982293|10982395|10982395|10982395 TGCATTT 7mer-m8 dme-miR-277-3p 2L + 10981909 10981986 3'utr SCAR FlyBase G3147.1 GCTATAGTGAACGAACGCATTTGCATTTTAAGCCTAGACGACAATCCAAGGAAAGCGATTTAAAAGACTTGCTAATTT 23 10981929 0.981091321 5 21 148 0.921052632 1.544068044 0.315789474 0.434782609 0.657894737 23 3 0 35 2L:10981909-10981986 7 29 40 FBgn0041781 1138.273333 48.57333333 74.31 0.025477185 0.59703541 0.390257031 1 1 1 0.2 dme-miR-8-3p 6mer3-8 CAGTAT 2L 10982205 10982210 + 2L_10982205_10982210_+ 0.968355612 0.957027311 0.962691461 0.008010318 SCAR FBtr0305255|FBtr0329950|FBtr0305256|FBtr0329949|FBtr0340223 10981664|10981721|10981664|10981664|10981664 10982293|10982395|10982395|10982395|10982395 2L + 10982176 10982221 3'utr SCAR FlyBase G3989.1 ATTAAAATATATCGAACTCCGTAGCATTTCAGTATACTCAACAAGC 12 10982203 0.672943577 5 12 79 1 1.146128036 0.142857143 0.166666667 0.285714286 12 0 0 14 2L:10982176-10982221 6 SCAR FBtr0329949|FBtr0305255|FBtr0340223|FBtr0305256|FBtr0329950 10981664|10981664|10981664|10981664|10981721 10982395|10982293|10982395|10982395|10982395 CAGTAT 6mer3-8 dme-miR-8-3p 2L + 10982183 10982287 3'utr SCAR FlyBase G3149.1 TATATCGAACTCCGTAGCATTTCAGTATACTCAACAAGCTATGAAATTGTATTATCCTTGTGAAAGTTAAATACCTGTATAATTAATAAAATATGTTTCACGAAT 18 10982203 0.982929762 7 17 131 0.903225806 1.447158031 0 0.5 0.709677419 18 3 0 28 2L:10982183-10982287 6 11 41 FBgn0041781 1138.273333 48.57333333 74.31 0.00966376 0.226461707 0.148028529 2 2 2 0.2 dme-miR-8-3p 8mer-A1 CAGTATTA 2L 10989220 10989227 + 2L_10989220_10989227_+ 0.671641288 0.671354408 0.671497848 0.000202869 CG12253 FBtr0080149 10989166 10989241 2L + 10989204 10989232 3'utr CG12253 FlyBase G3994.1 TACAATTTGTAACTTTCAGTATTAAAATT 10 10989218 0.713310949 5 10 97 1 1.079181246 0 0.2 0.333333333 10 0 0 12 2L:10989204-10989232 8 CG12253 FBtr0080149 10989166 10989241 CAGTATTA 8mer-A1 dme-miR-8-3p 2L + 10989207 10989233 3'utr CG12253 FlyBase G3150.1 AATTTGTAACTTTCAGTATTAAAATTA 5 10989218 0.750055121 2 4 44 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2L:10989207-10989233 8 7.5 42 FBgn0026148 79.66666667 7.916666667 12.16 0.094142259 0.947368421 0.616776316 2 2 2 0.2 dme-miR-2a-2-5p 8mer-A1 TGATGAGA 2L 11013291 11013298 - 2L_11013291_11013298_- 0.485551661 0.46667222 0.47611194 0.013349822 Samuel FBtr0080161|FBtr0331197 11013204|11013204 11014199|11014199 2L - 11013271 11013315 3'utr Samuel FlyBase G9962.1 TTTCTACAAAATAGGCATGATGAGAATGAACTTGATTTATTTTAT 66 11013295 0.84673306 4 65 303 1 1.913813852 0.024390244 0.196969697 0.353658537 66 0 0 82 2L:11013271-11013315 8 Samuel FBtr0080161|FBtr0331197 11013204|11013204 11014199|11014199 TGATGAGA 8mer-A1 dme-miR-2a-2-5p 2L - 11013269 11013308 3'utr Samuel FlyBase G7697.1 AAAATAGGCATGATGAGAATGAACTTGATTTATTTTATAC 42 11013295 0.908976223 4 40 185 0.971428571 1.832508913 0.014285714 0.404761905 0.642857143 42 2 0 68 2L:11013269-11013308 8 52.5 43 FBgn0032330 367.82 9.873333333 15.09333333 0.142732858 5.31735314 3.47835689 -3 -3 -3 0.2 dme-miR-7-5p 8mer-A1 GTCTTCCA 2L 11013949 11013956 - 2L_11013949_11013956_- 0.675025851 0.675364142 0.675194996 0.000239144 Samuel FBtr0080161|FBtr0331197 11013204|11013204 11014199|11014199 2L - 11013943 11013978 3'utr Samuel FlyBase G9966.1 GAGAAACAACAATAATCGCAAAGTCTTCCATTTGCA 5 11013948 0.963936234 3 5 30 1 0.698970004 0.2 0 0 5 0 0 5 2L:11013943-11013978 8 Samuel FBtr0080161|FBtr0331197 11013204|11013204 11014199|11014199 GTCTTCCA 8mer-A1 dme-miR-7-5p 2L - 11013944 11013976 3'utr Samuel FlyBase G7699.1 GAAACAACAATAATCGCAAAGTCTTCCATTTGC 5 11013950 0.885494638 4 5 27 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 2L:11013944-11013976 8 5 44 FBgn0032330 367.82 9.873333333 15.09333333 0.013593606 0.506414585 0.331272085 -8 -6 -7 0.2 dme-miR-1007-3p 7mer-m8 TGAGCTT 2L 11014119 11014125 - 2L_11014119_11014125_- 0.493487284 0.489695616 0.49159145 0.002681137 Samuel FBtr0080161|FBtr0331197 11013204|11013204 11014199|11014199 2L - 11014100 11014150 3'utr Samuel FlyBase G9968.1 TCACCTGCTAAAATGCTGAACCAAATGAGCTTTCAACACAATTAAGAAAGG 131 11014125 0.946624692 5 130 563 1 2.195899652 0.420382166 0.167938931 0.305732484 131 0 0 157 2L:11014100-11014150 7 Samuel FBtr0080161|FBtr0331197 11013204|11013204 11014199|11014199 TGAGCTT 7mer-m8 dme-miR-1007-3p 2L - 11014110 11014141 3'utr Samuel FlyBase G7700.1 AAAATGCTGAACCAAATGAGCTTTCAACACAA 86 11014125 0.949480115 2 86 351 1 2.08278537 0.595041322 0.302325581 0.504132231 86 0 0 121 2L:11014110-11014141 7 108 45 FBgn0032330 367.82 9.873333333 15.09333333 0.29362188 10.93855503 7.155477032 0 0 0 0.2 dme-miR-965-3p 6mer2-7 ACGCTT 2L 11095578 11095583 - 2L_11095578_11095583_- 0.999898246 0.991670319 0.995784283 0.005818004 Ge-1 FBtr0080232|FBtr0080231 11095148|11095351 11095687|11095687 2L - 11095563 11095603 3'utr Ge-1 FlyBase G9972.1 ACAAACACATTTATAAATACACGCTTGTAGTTAAGTCCAAA 9 11095586 0.849635666 3 8 73 0.888888889 0.903089987 0 0 0 9 1 0 8 2L:11095563-11095603 6 Ge-1 FBtr0080232|FBtr0080231 11095148|11095351 11095687|11095687 ACGCTT 6mer2-7 dme-miR-965-3p 2L - 11095520 11095601 3'utr Ge-1 FlyBase G7701.1 AAACACATTTATAAATACACGCTTGTAGTTAAGTCCAAAAAGAAGTTAGTATGCTAAAAAGCTCTCAGCTAAGTTCATCCCT 10 11095576 0.987074551 6 9 73 0.842105263 1.204119983 0 0.6 0.789473684 10 3 0 16 2L:11095520-11095601 6 8 46 FBgn0032340 1621.653333 39.62666667 60.70666667 0.004933237 0.201884253 0.131781243 3 -7 -2 0.2 dme-miR-965-3p 7mer-m8 TACGCTT 2L 11110556 11110562 + 2L_11110556_11110562_+ 0.61945463 0.618913655 0.619184142 0.000382474 l(2)gd1 FBtr0080197|FBtr0306138 11110434|11110434 11110851|11110851 2L + 11110512 11110605 3'utr l(2)gd1 FlyBase G4062.1 GTTTGTAAATATCCCTCACAGAAAATTCAATTTATCTAAGTATGTACGCTTTTGCCGATTCCTTCGCAGGAAGAAGGCATTTATATATTACGAA 155 11110563 0.989691289 10 145 1420 0.936507937 1.645913275 0.264550265 0.167741935 0.317460317 155 9 3 177 2L:11110512-11110605 7 l(2)gd1 FBtr0306138|FBtr0080197 11110434|11110434 11110851|11110851 TACGCTT 7mer-m8 dme-miR-965-3p 2L + 11110521 11110625 3'utr l(2)gd1 FlyBase G3192.1 TATCCCTCACAGAAAATTCAATTTATCTAAGTATGTACGCTTTTGCCGATTCCTTCGCAGGAAGAAGGCATTTATATATTACGAACACAACACATATAATGTACT 77 11110563 0.987945002 16 74 663 0.975 2.068185862 0.15 0.337662338 0.575 77 3 0 117 2L:11110521-11110625 7 104.5 47 FBgn0261983 621.6366667 24.99666667 38.09666667 0.168104627 4.180557408 2.743022137 -7 -7 -7 0.2 dme-miR-283-5p 7mer-m8 TGATATT 2L 11110662 11110668 + 2L_11110662_11110668_+ 0.620197616 0.615669021 0.617933319 0.003202204 l(2)gd1 FBtr0080197|FBtr0306138 11110434|11110434 11110851|11110851 2L + 11110653 11110715 3'utr l(2)gd1 FlyBase G4064.1 ATGTATATATGATATTGCCGGCGTTAAGGCGAAGGCGCAAGTCCAGAAGATTGTGCCGGTGAA 10 11110667 0.747844062 7 8 49 0.916666667 1.041392685 0.083333333 0.2 0.333333333 10 1 0 11 2L:11110653-11110715 7 l(2)gd1 FBtr0306138|FBtr0080197 11110434|11110434 11110851|11110851 TGATATT 7mer-m8 dme-miR-283-5p 2L + 11110651 11110719 3'utr l(2)gd1 FlyBase G3193.1 ATATGTATATATGATATTGCCGGCGTTAAGGCGAAGGCGCAAGTCCAGAAGATTGTGCCGGTGAAGTCA 8 11110676 0.886655924 6 8 31 1 1.079181246 0.166666667 0.25 0.5 8 0 0 12 2L:11110651-11110719 7 4.5 48 FBgn0261983 621.6366667 24.99666667 38.09666667 0.007238955 0.180024003 0.11812057 -5 -14 -9.5 0.2 dme-miR-79-3p 7mer-m8 TAGCTTT 2L 11110789 11110795 + 2L_11110789_11110795_+ 0.579362044 0.604458504 0.591910274 0.017745905 l(2)gd1 FBtr0080197|FBtr0306138 11110434|11110434 11110851|11110851 2L + 11110760 11110806 3'utr l(2)gd1 FlyBase G4065.1 ACTAGCGCCTAGCCGAAACCTGATTATGTTAGCTTTCACATTGCATA 15 11110787 0.741500413 4 14 119 0.875 1.146128036 0 0.066666667 0.125 15 2 0 14 2L:11110760-11110806 7 l(2)gd1 FBtr0306138|FBtr0080197 11110434|11110434 11110851|11110851 TAGCTTT 7mer-m8 dme-miR-79-3p 2L + 11110754 11110801 3'utr l(2)gd1 FlyBase G3194.1 CGGTCCACTAGCGCCTAGCCGAAACCTGATTATGTTAGCTTTCACATT 12 11110787 0.98590921 2 11 96 0.9375 1.176091259 0 0.333333333 0.5 12 1 0 15 2L:11110754-11110801 7 11 49 FBgn0261983 621.6366667 24.99666667 38.09666667 0.017695224 0.440058674 0.288739172 2 2 2 0.2 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 2L 11144 11149 - 2L_11144_11149_- 0.999928499 0.999982575 0.999955537 3.83E-05 l(2)gl FBtr0078168|FBtr0306591|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0306590|FBtr0078170|FBtr0330655|FBtr0078171|FBtr0306592|FBtr0078166 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11214|11214|11214|11214|11309|11214|11214|11214 2L - 11126 11211 3'utr l(2)gl FlyBase G6264.1 TGACAGAAGCCGTAACCTACTAATTATTTTATACCTTTACAGAAATACGACGCAAACGAGTACTAGTCCTGATGTAATTTAATCTA 132 11150 0.942780601 10 126 653 0.956521739 1.710399466 0.167701863 0.174242424 0.322981366 132 5 2 154 2L:11126-11211 6 l(2)gl FBtr0306592|FBtr0306590|FBtr0078166|FBtr0330655|FBtr0078171|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0078170|FBtr0078168|FBtr0306591 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11309|11214|11214|11214|11214|11214|11214|11214 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 2L - 11075 11173 3'utr l(2)gl FlyBase G4888.1 ACAGAAATACGACGCAAACGAGTACTAGTCCTGATGTAATTTAATCTATAATTACAAACATGTCTCACTAAAAATCGAACGGGGACAGCAAAATAGGAA 109 11142 0.961532016 8 105 523 0.97752809 1.939519253 0.101123596 0.412844037 0.640449438 109 3 1 174 2L:11075-11173 6 115 50 FBgn0002121 6538.69 148.3266667 227.85 0.017587621 0.775315745 0.504718016 1 -7 -3 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 1114826 1114831 - 2L_1114826_1114831_- 0.967937444 0.996186251 0.982061848 0.019974989 Pino FBtr0077988|FBtr0077988|FBtr0077988|FBtr0332272|FBtr0332272|FBtr0332272|FBtr0077987|FBtr0077987|FBtr0077987 1114652|1114652|1114652|1114652|1114652|1114652|1114652|1114652|1114652 1115733|1115733|1115733|1115733|1115733|1115733|1115733|1115733|1115733 2L - 1114722 1114932 3'utr Pino FlyBase G6741.1 TCTCCAAGGGAAAAGTGAAAGCGCATAGAAATGAGCAATTAAGGATGTGAAAACACGCACAAGGAAACAATTGAAAAGCATTACTCAAAGTTGAAGATTTTCTGTGAAAATCCATATGACATGTAGAAGTTTATACCTAATATATACACCTATATATTATATACCACATAAATCTGCATACAATATACATAAATATATATATATTTTTAAT 160 1114833 0.982222612 24 151 1135 0.952380952 1.77815125 0.142857143 0.15625 0.285714286 160 7 2 180 2L:1114722-1114932 6 Pino FBtr0077988|FBtr0077988|FBtr0077988|FBtr0332272|FBtr0332272|FBtr0332272|FBtr0077987|FBtr0077987|FBtr0077987 1114652|1114652|1114652|1114652|1114652|1114652|1114652|1114652|1114652 1115733|1115733|1115733|1115733|1115733|1115733|1115733|1115733|1115733 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 1114781 1114967 3'utr Pino FlyBase G5268.1 AGTGCTCAACAAAGTAACTACAGGATTGAACAATTTCTCCAAGGGAAAAGTGAAAGCGCATAGAAATGAGCAATTAAGGATGTGAAAACACGCACAAGGAAACAATTGAAAAGCATTACTCAAAGTTGAAGATTTTCTGTGAAAATCCATATGACATGTAGAAGTTTATACCTAATATATACACCTA 87 1114834 0.984882169 26 77 623 0.888 1.142232992 0.112 0.356321839 0.552 87 7 7 111 2L:1114781-1114967 6 53 51 FBgn0016926 853.46 50.28 77.25 0.062100157 1.054097056 0.686084142 2 3 2.5 0.2 dme-miR-14-3p 7mer-m8 AAGACTG 2L 11180259 11180265 + 2L_11180259_11180265_+ 0.670354411 0.670955762 0.670655086 0.000425254 CG4788 FBtr0080202 11179989 11180430 2L + 11180237 11180278 3'utr CG4788 FlyBase G4104.1 ACATAGATGTTTTCAAACAATTAAGACTGGAAAAATACAAAA 11 11180257 0.95103807 2 10 47 1 1.146128036 0.071428571 0.090909091 0.285714286 11 0 0 14 2L:11180237-11180278 7 CG4788 FBtr0080202 11179989 11180430 AAGACTG 7mer-m8 dme-miR-14-3p 2L + 11180239 11180272 3'utr CG4788 FlyBase G3217.1 ATAGATGTTTTCAAACAATTAAGACTGGAAAAAT 9 11180257 0.808056068 3 7 55 0.8 0.903089987 0 0.111111111 0.2 9 2 0 8 2L:11180239-11180272 7 9.5 52 FBgn0032354 97.66666667 9.44 14.38333333 0.097269625 1.006355932 0.660486674 2 2 2 0.2 dme-miR-2b-2-5p 7mer-A1 TGAAGAA 2L 11227 11233 - 2L_11227_11233_- 0.485848385 0.488027678 0.486938031 0.001540998 l(2)gl FBtr0330655 9837 11309 2L - 11216 11295 stop_codon l(2)gl FlyBase G6265.1 ACAAACATTTCTCATGAAAAAACGAACGGAGACAACAAAATAGGAACGCCAAAAACAGCGCCTGAAGAAAGCCAATTTTA 12 11233 0.934810111 4 11 11 0.928571429 1.113943352 0.142857143 0.166666667 0.285714286 12 1 0 13 2L:11216-11295 7 l(2)gl FBtr0330655 9837 11309 TGAAGAA 7mer-A1 dme-miR-2b-2-5p 2L - 11217 11254 3'utr l(2)gl FlyBase G4889.1 AGGAACGCCAAAAACAGCGCCTGAAGAAAGCCAATTTT 9 11233 0.514032001 2 8 8 1 1.176091259 0 0.444444444 0.666666667 9 0 0 15 2L:11217-11254 7 8.5 53 FBgn0002121 6538.69 148.3266667 227.85 0.001299955 0.057305946 0.037305245 0 0 0 0.2 dme-miR-14-3p 8mer-A1 AAGACTGA 2L 11277478 11277485 + 2L_11277478_11277485_+ 0.636077686 0.627088907 0.631583297 0.006356041 cana FBtr0344017|FBtr0091678|FBtr0344016 11277334|11277334|11277334 11277846|11277846|11277846 2L + 11277439 11277526 intron-3'utr cana FlyBase G4113.1 AGGTGGCAATTGCCACTGCGAGCAGCGGAGCTGCAAACAAAGACTGAGTTCGGACTGGAGGCAAAACGTTGAGTTCAACGATGATAAA 54 11277493 0.945825481 7 48 189 0.916666667 1.439332694 0.316666667 0.092592593 0.183333333 54 4 1 55 2L:11277439-11277526 8 cana FBtr0344017|FBtr0091678|FBtr0344016 11277334|11277334|11277334 11277846|11277846|11277846 AAGACTGA 8mer-A1 dme-miR-14-3p 2L + 11277448 11277521 3'utr cana FlyBase G3221.1 TTGCCACTGCGAGCAGCGGAGCTGCAAACAAAGACTGAGTTCGGACTGGAGGCAAAACGTTGAGTTCAACGATG 37 11277488 0.942388917 6 32 128 0.915254237 1.130333768 0.576271186 0.378378378 0.610169492 37 2 3 54 2L:11277448-11277521 8 35.5 54 FBgn0040233 712.72 14.75333333 22.66 0.049809182 2.406235879 1.566637246 -15 -10 -12.5 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC 2L 112797 112803 + 2L_112797_112803_+ 0.548256017 0.658181386 0.603218702 0.077728996 Sam-S FBtr0330656|FBtr0089428 112780|112740 114432|114210 2L + 112764 112818 stop_codon Sam-S FlyBase G455.2 AAACGAAAAGATTGCTGAGCTGCGTCGCTCAGATGTGTTCTGGTGGGCTCGCCCC 14 112804 0.976396693 4 13 82 0.894736842 1.230448921 0.315789474 0.285714286 0.473684211 14 2 0 17 2L:112764-112818 7 Sam-S FBtr0089428|FBtr0330656 112740|112780 114210|114432 TGTGTTC 7mer-m8 dme-miR-317-3p 2L + 112723 112822 stop_codon Sam-S FlyBase G382.1 GAGGAATGTATGCCCCTAACCGTCGTTTTGGCTCACAAACTAAACGAAAAGATTGCTGAGCTGCGTCGCTCAGATGTGTTCTGGTGGGCTCGCCCCGATT 21 112804 0.980591471 8 20 141 0.95 1.579783597 0.25 0.571428571 0.775 21 2 0 38 2L:112723-112822 7 12.5 55 FBgn0005278 1886.66 102.5866667 157.21 0.006625465 0.121848193 0.079511481 -7 -7 -7 0.2 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 11281713 11281719 + 2L_11281713_11281719_+ 0.683573536 0.771900592 0.727737064 0.062456691 Ppt2 FBtr0080212 11281669 11281920 2L + 11281593 11281750 stop_codon Ppt2 FlyBase G4121.1 AAACCCCATGTTCATCATCTTGCCTGGCACACGCGAAGGGATGTCATCCACGAAGTGATATTTCCATATCTGGACTGAATAAGAAACCAAAACTACTGAACTATACTGAGCGATCAAACGGCTGTGATCGGAAAGGCGGACAAAGGCTCACTCTCATC 86 11281698 0.969928004 18 70 398 0.83 1.317018101 0.25 0.127906977 0.25 86 14 3 83 2L:11281593-11281750 7 Ppt2 FBtr0080212 11281669 11281920 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L + 11281589 11281749 stop_codon Ppt2 FlyBase G3230.1 GGTCAAACCCCATGTTCATCATCTTGCCTGGCACACGCGAAGGGATGTCATCCACGAAGTGATATTTCCATATCTGGACTGAATAAGAAACCAAAACTACTGAACTATACTGAGCGATCAAACGGCTGTGATCGGAAAGGCGGACAAAGGCTCACTCTCAT 57 11281698 0.975088893 16 45 279 0.822222222 1.392110465 0.255555556 0.368421053 0.6 57 14 2 74 2L:11281589-11281749 7 36.5 56 FBgn0032358 64.33333333 6.69 10.29333333 0.567357513 5.455904335 3.545984456 15 15 15 0.2 dme-miR-33-5p 6mer3-8 CAATGC 2L 1132056 1132061 + 2L_1132056_1132061_+ 0.747285999 0.749509336 0.748397667 0.001572111 CG4552 FBtr0077956 1131952 1132411 2L + 1132041 1132130 3'utr CG4552 FlyBase G972.1 CAGAGACACAAAGTGCAATGCGCCGCTGCGAGCGGTGTAATAGTTTGTAATTGGCATTGTTTTCCTTGTATTAGCTGAAATAGTATAGTT 34 1132059 0.973325131 10 32 237 0.95 1.278753601 0.3 0.147058824 0.275 34 1 1 38 2L:1132041-1132130 6 CG4552 FBtr0077956 1131952 1132411 CAATGC 6mer3-8 dme-miR-33-5p 2L + 1132037 1132079 3'utr CG4552 FlyBase G780.1 AAATCAGAGACACAAAGTGCAATGCGCCGCTGCGAGCGGTGTA 12 1132059 0.974488497 2 9 33 0.933333333 1.146128036 0.4 0.25 0.4 12 1 0 14 2L:1132037-1132079 6 13 57 FBgn0031304 726.5833333 32.48666667 49.62 0.01789196 0.40016417 0.261991133 -3 -3 -3 0.2 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA 2L 1132193 1132200 + 2L_1132193_1132200_+ 0.539585249 0.625112089 0.582348669 0.060476651 CG4552 FBtr0077956 1131952 1132411 2L + 1132133 1132223 3'utr CG4552 FlyBase G973.1 TATTGTAAACGAAGCGCTGGCTGCAATTGTAACATAGTGCACTCGGTGCAGAGACCGGATTTGAAGAAAATAGTCGAACGTAGTCCCAGAT 32 1132192 0.962180837 7 30 156 0.951219512 1.113943352 0.243902439 0.25 0.414634146 32 0 2 39 2L:1132133-1132223 8 CG4552 FBtr0077956 1131952 1132411 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p 2L + 1132127 1132247 3'utr CG4552 FlyBase G781.1 AGTTCTTATTGTAAACGAAGCGCTGGCTGCAATTGTAACATAGTGCACTCGGTGCAGAGACCGGATTTGAAGAAAATAGTCGAACGTAGTCCCAGATCACATGGCCATCCCGAGCATGCCA 18 1132192 0.955255859 8 16 88 0.925925926 1.397940009 0.259259259 0.444444444 0.62962963 18 2 0 25 2L:1132127-1132247 8 15 58 FBgn0031304 726.5833333 32.48666667 49.62 0.020644569 0.461727888 0.302297461 1 1 1 0.2 dme-miR-1008-3p 6mer2-7 GCTGTG 2L 113734 113739 + 2L_113734_113739_+ 0.990335938 0.986520398 0.988428168 0.002697966 Sam-S FBtr0330656|FBtr0089429|FBtr0089431|FBtr0089430|FBtr0089436|FBtr0089434|FBtr0089435|FBtr0089437|FBtr0089432|FBtr0089428|FBtr0089433 112780|113541|113541|113541|113541|113541|113541|113541|113541|112740|113541 114432|114432|114432|114432|114210|114432|114432|114432|114210|114210|114432 2L + 113694 113904 3'utr Sam-S FlyBase G461.2 TAGGCTTGCCAACTCTTATGGGCTTTCTTCTCTAACTTATGCTGTGCTCTTCGCTATATAATTTAAACCATTCTGATGTGTGTAGTCTTCTCACACGGAACTAGTTTTAGTCGTCTTAATACCCGCATATATACCTAATAGAGAGCTCCAAAAGAATTGATGAGCTTTAGTTATGCATATACATAGTATAGTGTCGGTCAGTTCAGTAAAA 148 113733 0.951739125 30 141 1345 0.947674419 1.610127613 0.13372093 0.162162162 0.279069767 148 6 3 163 2L:113694-113904 6 Sam-S FBtr0089433|FBtr0089432|FBtr0089428|FBtr0089437|FBtr0089435|FBtr0089434|FBtr0089436|FBtr0089430|FBtr0089431|FBtr0089429|FBtr0330656 113541|113541|112740|113541|113541|113541|113541|113541|113541|113541|112780 114432|114210|114210|114432|114432|114432|114210|114432|114432|114432|114432 GCTGTG 6mer2-7 dme-miR-1008-3p 2L + 113675 113877 3'utr Sam-S FlyBase G387.2 GTCAGAGGAGAAGGCGGCATAGGCTTGCCAACTCTTATGGGCTTTCTTCTCTAACTTATGCTGTGCTCTTCGCTATATAATTTAAACCATTCTGATGTGTGTAGTCTTCTCACACGGAACTAGTTTTAGTCGTCTTAATACCCGCATATATACCTAATAGAGAGCTCCAAAAGAATTGATGAGCTTTAGTTATGCATATACAT 79 113733 0.939056871 21 71 694 0.896551724 1.716003344 0.137931034 0.316455696 0.534482759 79 11 1 104 2L:113675-113877 6 45 59 FBgn0005278 1886.66 102.5866667 157.21 0.023851674 0.438653496 0.286241333 1 1 1 0.2 dme-miR-92b-3p 7mer-m1 TGCAATT 2L 11508892 11508898 - 2L_11508892_11508898_- 0.753284008 0.647249271 0.700266639 0.074977855 CG6509 FBtr0336630|FBtr0080247|FBtr0080246|FBtr0336631 11508397|11508397|11508772|11508397 11511170|11509299|11509299|11509299 2L - 11508876 11508967 3'utr CG6509 FlyBase G10060.1 AATTTATATATACCGTTTGGAACTAGATTTCCTTCTCTGGCGACATTCTAAGCCAAAAGTCTGTTTGTATGCAATTTATTATTATGTAATTG 22 11508902 0.985644958 12 20 174 0.931034483 1.431363764 0.068965517 0.272727273 0.448275862 22 2 0 27 2L:11508876-11508967 7 CG6509 FBtr0080246|FBtr0336631|FBtr0336630|FBtr0080247 11508772|11508397|11508397|11508397 11509299|11509299|11511170|11509299 TGCAATT 7mer-m1 dme-miR-92b-3p 2L - 11508897 11508944 3'utr CG6509 FlyBase G7755.1 TAGATTTCCTTCTCTGGCGACATTCTAAGCCAAAAGTCTGTTTGTATG 11 11508905 0.78637229 5 11 75 1 1.204119983 0 0.454545455 0.625 11 0 0 16 2L:11508897-11508944 1 3.5 60 FBgn0032363 893.76 15.01 22.98666667 0.00391604 0.233177881 0.152262181 4 7 5.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 11510219 11510226 - 2L_11510219_11510226_- 0.650171355 0.619415246 0.6347933 0.021747918 CG6509 FBtr0336630|FBtr0336630|FBtr0336630 11508397|11508397|11508397 11511170|11511170|11511170 2L - 11510184 11510250 5'utr CG6509 FlyBase G10068.1 ACTGCGTTCGGGTGAGGTGGTCGACTGTGATACGGGAACGGCCAGACGCGGCAGCACTTCGGCCAGA 6 11510233 0.979863718 4 4 27 0.714285714 0.698970004 0.428571429 0.166666667 0.285714286 6 2 0 5 2L:11510184-11510250 8 CG6509 FBtr0336630|FBtr0336630|FBtr0336630 11508397|11508397|11508397 11511170|11511170|11511170 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 11510210 11510245 5'utr CG6509 FlyBase G7759.1 GTTCGGGTGAGGTGGTCGACTGTGATACGGGAACGG 5 11510230 0.86229746 3 5 27 1 0.954242509 0.666666667 0.6 0.777777778 5 0 0 9 2L:11510210-11510245 8 4 61 FBgn0032363 893.76 15.01 22.98666667 0.004475474 0.266489007 0.174013921 7 4 5.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 11523071 11523077 - 2L_11523071_11523077_- 0.787292177 0.770870119 0.779081148 0.011612178 CG31705 FBtr0345719|FBtr0345719|FBtr0345719 11523019|11523019|11523019 11523549|11523549|11523549 2L - 11523054 11523094 3'utr CG31705 FlyBase G10102.1 CAGACCACTATAACATTTGTGATACAATAACAATTGGAAAA 11 11523079 0.970156949 3 11 79 1 1.041392685 0 0 0 11 0 0 11 2L:11523054-11523094 7 CG31705 FBtr0345719|FBtr0345719|FBtr0345719 11523019|11523019|11523019 11523549|11523549|11523549 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 11523064 11523093 3'utr CG31705 FlyBase G7779.1 AGACCACTATAACATTTGTGATACAATAAC 9 11523079 0.715347665 2 9 60 1 1.230448921 0 0.444444444 0.705882353 9 0 0 17 2L:11523064-11523093 7 10 62 FBgn0028490 1886.113333 87.62 132.81 0.005301908 0.114129194 0.075295535 2 2 2 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 2L 11523516 11523521 - 2L_11523516_11523521_- 0.747530861 0.794087726 0.770809293 0.032920629 CG31705 FBtr0345719|FBtr0321293|FBtr0080242 11523019|11523302|11523302 11523549|11523549|11523549 2L - 11523497 11523569 stop_codon CG31705 FlyBase G10105.1 TGGCCTACTGTCTCCACTAACGGCCCATTGCCTCCATACAATCCTTAATTGACTCAAGGACACAGTCTCGTTG 29 11523521 0.820683836 7 26 157 0.894736842 0.929418926 0.052631579 0.24137931 0.421052632 29 1 3 34 2L:11523497-11523569 6 CG31705 FBtr0080242|FBtr0321293|FBtr0345719 11523302|11523302|11523019 11523549|11523549|11523549 TTGACT 6mer3-8 dme-miR-1012-3p 2L - 11523496 11523551 stop_codon CG31705 FlyBase G7782.1 AACGGCCCATTGCCTCCATACAATCCTTAATTGACTCAAGGACACAGTCTCGTTGG 20 11523521 0.870384457 7 19 103 0.925925926 1.397940009 0 0.25 0.444444444 20 2 0 25 2L:11523496-11523551 6 21 63 FBgn0028490 1886.113333 87.62 132.81 0.011134008 0.239671308 0.158120623 0 0 0 0.2 dme-miR-14-3p 7mer-m8 AAGACTG 2L 1166384 1166390 + 2L_1166384_1166390_+ 0.671741243 0.670660344 0.671200794 0.000764312 IntS14 FBtr0077962 1166360 1166425 2L + 1166372 1166405 3'utr IntS14 FlyBase G990.1 TGTCCTTACTTTAAGACTGTGTTTACTTTGTAAT 6 1166381 0.895502368 5 6 63 1 0.903089987 0 0.166666667 0.375 6 0 0 8 2L:1166372-1166405 7 IntS14 FBtr0077962 1166360 1166425 AAGACTG 7mer-m8 dme-miR-14-3p 2L + 1166367 1166408 3'utr IntS14 FlyBase G793.1 TTTTATGTCCTTACTTTAAGACTGTGTTTACTTTGTAATACA 7 1166391 0.987049466 4 7 78 1 1.176091259 0 0.571428571 0.8 7 0 0 15 2L:1166367-1166408 7 6.5 64 FBgn0031314 268.3333333 16.95333333 25.93333333 0.024223602 0.383405427 0.250642674 3 -7 -2 0.2 dme-miR-283-5p 7mer-m8 TGATATT 2L 117202 117208 - 2L_117202_117208_- 0.480471764 0.362983949 0.421727856 0.083076491 CG4822 FBtr0100309|FBtr0100310|FBtr0330646 117077|117172|117077 119269|119426|119201 2L - 117100 117791 lincRNA_intron-lincRNA_exon CG4822 FlyBase G6309.1 AATATATCCTGATTAGTTCACTTATACTTTAGAATGCAATGTTCATGGGGCCAGTTCTCGCCGTGCCGCTGATCCTGCTTTCCATTTACGGCATTGGGTATGGCGGAGGAACATACATATCCCCTCTTATGAGGTTTCTCATGCATCTTAGCTACCTTCGCCATAGTATGGAAGGCCTAGTCGCATCCTTGTACGACTACGGACGCGCCGACACAATTTGCGAAGACACGGAAATCTTTTGCTCATTTAAAAAGTCGAAAGTTTTGTTAGCCTTTTTAGGATTCGAAAACATGCACTATTTGTGGTCTCTATCTTGCTTGATGAGTTTTTATTTGCTGTTCACCGTAGCAGCATACTTTATGATTAGACTGCGACTGAAACACTCCGAGGTCAGCCCCATTTTTGCATATGTCATACAGCTGTTAACGAAATATTTTAACTTTACTTCGTACAATTACTAACATTAACAACATGGGCGGTTTGACCTCGGTGCTAGAAAAATTATTTTAAGCGGTATTTCAGGGGACAGTCTTAACCTCCCATATTATTTATGGGCTTCAATAATATTAATAAACTATCAAAGTGATATTGGATTCTGAATAAAAGTTTATGATCAAGAATACAAATATAATCAAGGGAACAATAAATTACTATAATTCGATCATATTGTTAACAAGGCAGAAGAAACACTA 1262 117203 0.938729087 153 1181 9042 0.936821953 2.052782703 0.128908743 0.198098257 0.354179962 1262 87 12 1468 2L:117100-117791 7 CG4822 FBtr0100310|FBtr0330646|FBtr0100309 117172|117077|117077 119426|119201|119269 TGATATT 7mer-m8 dme-miR-283-5p 2L - 117098 117754 stop_codon CG4822 FlyBase G4924.1 AATGTTCATGGGGCCAGTTCTCGCCGTGCCGCTGATCCTGCTTTCCATTTACGGCATTGGGTATGGCGGAGGAACATACATATCCCCTCTTATGAGGTTTCTCATGCATCTTAGCTACCTTCGCCATAGTATGGAAGGCCTAGTCGCATCCTTGTACGACTACGGACGCGCCGACACAATTTGCGAAGACACGGAAATCTTTTGCTCATTTAAAAAGTCGAAAGTTTTGTTAGCCTTTTTAGGATTCGAAAACATGCACTATTTGTGGTCTCTATCTTGCTTGATGAGTTTTTATTTGCTGTTCACCGTAGCAGCATACTTTATGATTAGACTGCGACTGAAACACTCCGAGGTCAGCCCCATTTTTGCATATGTCATACAGCTGTTAACGAAATATTTTAACTTTACTTCGTACAATTACTAACATTAACAACATGGGCGGTTTGACCTCGGTGCTAGAAAAATTATTTTAAGCGGTATTTCAGGGGACAGTCTTAACCTCCCATATTATTTATGGGCTTCAATAATATTAATAAACTATCAAAGTGATATTGGATTCTGAATAAAAGTTTATGATCAAGAATACAAATATAATCAAGGGAACAATAAATTACTATAATTCGATCATATTGTTAACAAGGCAGAAGAAACACTACG 863 117203 0.982810554 128 792 5976 0.926584235 1.736396502 0.14992272 0.351100811 0.567233385 863 74 21 1199 2L:117098-117754 7 235.5 65 FBgn0031220 2984.836667 134.1266667 204.7566667 0.07889879 1.755802972 1.150145701 -5 -5 -5 0.2 dme-bantam-3p 7mer-m8 TGATCTC 2L 117839 117845 - 2L_117839_117845_- 0.548334844 0.57626171 0.562298277 0.0197473 CG4822 FBtr0100309|FBtr0100310|FBtr0330646 117077|117172|117077 119269|119426|119201 2L - 117809 118068 3'utr-intron CG4822 FlyBase G6310.1 GAAATCAATCTGTTAAAAAGGGAGTACAACAACCAGTGGTACCGTCTGAGCTCCTACTACGCAGCAATGGTTACCTCAAAGCTACCATCTATGTTTATTTTGGCCGTTATTTATCTATCCATTGTGTACTTAATGTCCAGCCAACCACTTGAATGGTTCCGCTTTGCCATGCTATTTACAATAGCTTTCGTAACGGCCCTAACTTCCGACAGTTTTGGCTTGTTGATCTCCAGTAGACTGAGCTTAGTGGTAAGCGATTT 4416 117846 0.849819808 65 4268 40796 0.967397521 2.290377115 0.186081983 0.154211957 0.287893232 4416 146 25 5074 2L:117809-118068 7 CG4822 FBtr0100310|FBtr0330646|FBtr0100309 117172|117077|117077 119426|119201|119269 TGATCTC 7mer-m8 dme-bantam-3p 2L - 117809 118076 3'utr-intron CG4822 FlyBase G4926.1 TTCCCACGGAAATCAATCTGTTAAAAAGGGAGTACAACAACCAGTGGTACCGTCTGAGCTCCTACTACGCAGCAATGGTTACCTCAAAGCTACCATCTATGTTTATTTTGGCCGTTATTTATCTATCCATTGTGTACTTAATGTCCAGCCAACCACTTGAATGGTTCCGCTTTGCCATGCTATTTACAATAGCTTTCGTAACGGCCCTAACTTCCGACAGTTTTGGCTTGTTGATCTCCAGTAGACTGAGCTTAGTGGTAAGCGATTT 2638 117846 0.83996091 58 2539 23816 0.962350547 2.072686363 0.188756042 0.354435178 0.566776902 2638 117 31 3783 2L:117809-118076 7 3173.5 66 FBgn0031220 2984.836667 134.1266667 204.7566667 1.063207255 23.6604702 15.49888486 1 1 1 0.2 dme-miR-980-3p 7mer-A1 GCAGCTA 2L 11796912 11796918 - 2L_11796912_11796918_- 0.790947684 0.776301522 0.783624603 0.010356427 crol FBtr0335474|FBtr0080262|FBtr0335475|FBtr0080263|FBtr0305262|FBtr0080261|FBtr0335473|FBtr0335476|FBtr0080260 11794325|11795170|11794325|11795170|11795170|11795494|11794325|11795167|11794325 11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124 2L - 11796907 11797013 3'utr crol FlyBase G10122.2 AGGCATGCGTGCCACCAGTGAGCCAGTGCTAGTGAGCCGAGCTGACGCGACTTCTCTAGATAGGACACACATCATAACAAGCGCACCCCATATAAGCAGCTAGTTGT 119 11796921 0.855509757 14 115 513 0.964285714 1.528273777 0.3 0.176470588 0.3 119 2 3 135 2L:11796907-11797013 7 crol FBtr0305262|FBtr0335473|FBtr0080261|FBtr0335476|FBtr0080260|FBtr0335474|FBtr0080262|FBtr0335475|FBtr0080263 11795170|11794325|11795494|11795167|11794325|11794325|11795170|11794325|11795170 11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124 GCAGCTA 7mer-A1 dme-miR-980-3p 2L - 11796821 11797006 3'utr crol FlyBase G7807.1 CGTGCCACCAGTGAGCCAGTGCTAGTGAGCCGAGCTGACGCGACTTCTCTAGATAGGACACACATCATAACAAGCGCACCCCATATAAGCAGCTAGTTGTATGTACAATAGTTTTAGCAGCGCGCTGGTTACGCTGATCGGTGGCCCCAAGCGGATATCGTGATACGCTGGGTTTCTAGGGTGTGT 126 11796921 0.844030463 28 112 658 0.880208333 1.324796718 0.276041667 0.365079365 0.583333333 126 16 7 169 2L:11796821-11797006 7 30 67 FBgn0020309 6740.04 140.5266667 216.61 0.004451012 0.213482613 0.138497761 3 3 3 0.2 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 11810369 11810376 - 2L_11810369_11810376_- 0.624575133 0.624856502 0.624715817 0.00019898 CycY FBtr0333425 11810090 11811116 2L - 11810365 11810420 3'utr CycY FlyBase G10151.1 AATAACTCAATATGATTTCGTGTGATTCTTATATAGTTTCCATTTAGCTTTATATA 20 11810377 0.820306031 5 20 206 1 1.380211242 0.083333333 0.15 0.291666667 20 0 0 24 2L:11810365-11810420 8 CycY FBtr0333425 11810090 11811116 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 11810365 11810420 3'utr CycY FlyBase G7830.1 AATAACTCAATATGATTTCGTGTGATTCTTATATAGTTTCCATTTAGCTTTATATA 25 11810377 0.779495814 6 25 256 1 1.491361694 0.064516129 0.2 0.35483871 25 0 0 31 2L:11810365-11810420 8 14 68 FBgn0032378 829.4 43.03666667 66.07 0.016879672 0.325304004 0.211896473 1 1 1 0.2 dme-miR-31a-5p 6mer2-7 CTTGCC 2L 1181655 1181660 + 2L_1181655_1181660_+ 0.590178024 0.896872583 0.743525304 0.216865831 CG4896 FBtr0335394|FBtr0335395|FBtr0308698 1179902|1179230|1179230 1182454|1182454|1182454 2L + 1181586 1181662 3'utr CG4896 FlyBase G1009.1 TTGAAGCTAGCGTTGGGACTAAACGAGCCATTAGCGATGAATCTGACTACGTGGACTTCCAAAAACTTACTTGCCTG 14 1181639 0.799321 10 12 69 0.888888889 1.204119983 0.277777778 0.285714286 0.444444444 14 2 0 16 2L:1181586-1181662 6 CG4896 FBtr0308698|FBtr0335394|FBtr0335395 1179230|1179902|1179230 1182454|1182454|1182454 CTTGCC 6mer2-7 dme-miR-31a-5p 2L + 1181627 1181672 3'utr CG4896 FlyBase G803.1 TCTGACTACGTGGACTTCCAAAAACTTACTTGCCTGCTCTGCATGC 8 1181654 0.755305304 5 7 48 0.846153846 1.041392685 0 0.375 0.615384615 8 2 0 11 2L:1181627-1181672 6 5.5 69 FBgn0031319 314.3566667 11.06666667 17.08 0.01749605 0.496987952 0.322014052 16 1 8.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 118176 118182 - 2L_118176_118182_- 0.723612535 0.725771454 0.724691994 0.001526644 CG4822 FBtr0100309|FBtr0100309|FBtr0100309|FBtr0100310|FBtr0100310|FBtr0100310|FBtr0330646|FBtr0330646|FBtr0330646 117077|117077|117077|117172|117172|117172|117077|117077|117077 119269|119269|119269|119426|119426|119426|119201|119201|119201 2L - 118136 118303 3'utr CG4822 FlyBase G6311.1 CGTACATCAAGCTTAAGTTCTACATGAACATCGTTCTTGCTTTACTGGTGGGTTCGCTCTACTTTGGTATGGGAACCTCGGCCTCTAAAGCGCTTTTTAACTTCGGTTTCATGTTCACCATTGTGATAGCATACCTCTACCTTCCTATGATGCCTGTGCTCTTATATT 677 118183 0.799572564 41 607 5604 0.90295858 1.174954362 0.146745562 0.209748892 0.366863905 677 32 50 763 2L:118136-118303 7 CG4822 FBtr0100310|FBtr0100310|FBtr0100310|FBtr0330646|FBtr0330646|FBtr0330646|FBtr0100309|FBtr0100309|FBtr0100309 117172|117172|117172|117077|117077|117077|117077|117077|117077 119426|119426|119426|119201|119201|119201|119269|119269|119269 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 118136 118245 3'utr CG4822 FlyBase G4927.1 CTACTTTGGTATGGGAACCTCGGCCTCTAAAGCGCTTTTTAACTTCGGTTTCATGTTCACCATTGTGATAGCATACCTCTACCTTCCTATGATGCCTGTGCTCTTATATT 400 118183 0.793520742 26 359 3210 0.904040404 1.252853031 0.131313131 0.3625 0.570707071 400 28 29 537 2L:118136-118245 7 441 70 FBgn0031220 2984.836667 134.1266667 204.7566667 0.147746778 3.287936776 2.153776027 1 1 1 0.2 dme-miR-14-3p 6mer3-8 AAGACT 2L 1181949 1181954 + 2L_1181949_1181954_+ 0.910353884 0.595208264 0.752781074 0.222841591 CG4896 FBtr0335394|FBtr0335395|FBtr0308698 1179902|1179230|1179230 1182454|1182454|1182454 2L + 1181872 1182078 3'utr CG4896 FlyBase G1011.1 AGGAACGCAGGCTGAAGTACGGTGAGAGCGATCCTCCTCCACCAAATAGGAGCCGGGAGCGTTTCGAGCAAGAGATAAAGACTTTGCAGTCGCGCCAGAAGGATTCTTTTGGCGCCACTGCAGCCATGCCCATCAGTTCGACCAACGTGGGCAGCCGCCTGATGCAGAAGATGGGCTGGTCGGAGGGCCAGGGACTGGGCAAAAAGA 461 1181956 0.949576558 19 438 1900 0.952198853 1.998259338 0.544933078 0.114967462 0.219885277 461 21 4 498 2L:1181872-1182078 6 CG4896 FBtr0308698|FBtr0335394|FBtr0335395 1179230|1179902|1179230 1182454|1182454|1182454 AAGACT 6mer3-8 dme-miR-14-3p 2L + 1181862 1182074 3'utr CG4896 FlyBase G805.1 GATCGTGCCAAGGAACGCAGGCTGAAGTACGGTGAGAGCGATCCTCCTCCACCAAATAGGAGCCGGGAGCGTTTCGAGCAAGAGATAAAGACTTTGCAGTCGCGCCAGAAGGATTCTTTTGGCGCCACTGCAGCCATGCCCATCAGTTCGACCAACGTGGGCAGCCGCCTGATGCAGAAGATGGGCTGGTCGGAGGGCCAGGGACTGGGCAAA 333 1181956 0.8896486 20 327 1379 0.979338843 2.374748346 0.516528926 0.345345345 0.549586777 333 9 1 474 2L:1181862-1182074 6 350 71 FBgn0031319 314.3566667 11.06666667 17.08 1.113385009 31.62650602 20.49180328 -7 -7 -7 0.2 dme-miR-276a-3p 8mer-A1 AGTTCCTA 2L 11827385 11827392 - 2L_11827385_11827392_- 0.637902979 0.632530807 0.635216893 0.003798719 esc FBtr0080325 11827202 11827459 2L - 11827335 11827448 5'utr esc FlyBase G10163.1 GGCGCAACCACAAACCAAATCTCACGTGGCCAAAACTTACAACATTTCCCTCAATTAGTTCCTAGTTGGTTAGCATTAAGATATAGAATTACGCTCCTGTGCTGTTCCAAATTA 83 11827403 0.988596207 15 76 710 0.911111111 1.612783857 0.044444444 0.084337349 0.155555556 83 7 1 82 2L:11827335-11827448 8 esc FBtr0080325 11827202 11827459 AGTTCCTA 8mer-A1 dme-miR-276a-3p 2L - 11827336 11827422 5'utr esc FlyBase G7840.1 TGGCCAAAACTTACAACATTTCCCTCAATTAGTTCCTAGTTGGTTAGCATTAAGATATAGAATTACGCTCCTGTGCTGTTCCAAATT 49 11827403 0.769280404 7 42 388 0.869565217 1.477121255 0.043478261 0.326530612 0.52173913 49 8 1 60 2L:11827336-11827422 8 34 72 FBgn0000588 215.62 15.44 23.56 0.157684816 2.202072539 1.443123939 11 11 11 0.2 dme-bantam-3p 6mer3-8 TGATCT 2L 118798 118803 - 2L_118798_118803_- 0.98511904 0.933265871 0.959192456 0.036665679 CG4822 FBtr0100309|FBtr0100310|FBtr0330646 117077|117172|117077 119269|119426|119201 2L - 118514 118873 3'utr CG4822 FlyBase G6313.1 GGTTTAGACGATTTATCGAGTTCACAATGCATTGCCCTACTCAAAGTTTTGGCCGCCGGGGGGCGCACTGTGATCTGCTCCATCCATACGCCATCTGCCAAGATCTTCGAGATGCTCGATGCAGTCTACGTTCTAGCCGAAGGCCAGTGCGTCTACCAAGGAAAGGGGTCCAACATTGTACCTTTCTTGAAGAACTTTGGGCTTTGTTGTCCAATAACCTACAACCCGGCTGACTTCATTATCGAAGTTGCTTGCCTTGAGTATGGCGGGTCCTATCACGAGCCAATGGTAGAAGCCGTGGGCAACGGCAAAGTTGCGCGATGGAGTCCTCCAGCAGTGGAAGGTGAAACAACAACAACC 356 118798 0.969903548 64 339 2197 0.956416465 1.897627091 0.341404358 0.137640449 0.256658596 356 14 4 395 2L:118514-118873 6 CG4822 FBtr0100310|FBtr0330646|FBtr0100309 117172|117077|117077 119426|119201|119269 TGATCT 6mer3-8 dme-bantam-3p 2L - 118491 118868 3'utr CG4822 FlyBase G4930.1 AGACGATTTATCGAGTTCACAATGCATTGCCCTACTCAAAGTTTTGGCCGCCGGGGGGCGCACTGTGATCTGCTCCATCCATACGCCATCTGCCAAGATCTTCGAGATGCTCGATGCAGTCTACGTTCTAGCCGAAGGCCAGTGCGTCTACCAAGGAAAGGGGTCCAACATTGTACCTTTCTTGAAGAACTTTGGGCTTTGTTGTCCAATAACCTACAACCCGGCTGACTTCATTATCGAAGTTGCTTGCCTTGAGTATGGCGGGTCCTATCACGAGCCAATGGTAGAAGCCGTGGGCAACGGCAAAGTTGCGCGATGGAGTCCTCCAGCAGTGGAAGGTGAAACAACAACAACCAAAACCGACACCACATCGGGGGC 243 118798 0.975629668 54 233 1471 0.948275862 2.51851394 0.353448276 0.341563786 0.540229885 243 18 0 330 2L:118491-118868 6 110.5 73 FBgn0031220 2984.836667 134.1266667 204.7566667 0.037020451 0.823848104 0.539664968 -5 -5 -5 0.2 dme-miR-278-3p 6mer3-8 CCCACC 2L 118958 118963 - 2L_118958_118963_- 0.409268963 0.571793506 0.490531235 0.114922176 CG4822 FBtr0100309|FBtr0100310|FBtr0330646 117077|117172|117077 119269|119426|119201 2L - 118935 119065 3'utr CG4822 FlyBase G6314.1 TTTGGGAATGTTGCGCCTAAAAGACACCCTAAACACCATGGCTCAAAAGCTATCTGGGGGTGAGCGAAAGCGTTTATGCATTGCCCTTGAGCTGGTCAACAACCCACCTGTCATCTTTCTAGATGAACCTA 50 118984 0.748559659 20 49 277 0.984375 1.799340549 0.125 0.26 0.421875 50 1 0 63 2L:118935-119065 6 CG4822 FBtr0100310|FBtr0330646|FBtr0100309 117172|117077|117077 119426|119201|119269 CCCACC 6mer3-8 dme-miR-278-3p 2L - 118932 119066 3'utr CG4822 FlyBase G4931.1 TTTTGGGAATGTTGCGCCTAAAAGACACCCTAAACACCATGGCTCAAAAGCTATCTGGGGGTGAGCGAAAGCGTTTATGCATTGCCCTTGAGCTGGTCAACAACCCACCTGTCATCTTTCTAGATGAACCTACAA 50 118956 0.745907414 20 48 271 0.947368421 1.857332496 0.065789474 0.42 0.618421053 50 4 0 72 2L:118932-119066 6 18.5 74 FBgn0031220 2984.836667 134.1266667 204.7566667 0.006197994 0.137929321 0.090351149 21 -7 7 0.2 dme-miR-14-3p 7mer-A1 AGACTGA 2L 119231 119237 - 2L_119231_119237_- 0.81930658 0.820592114 0.819949347 0.000908986 CG4822 FBtr0100309 117077 119269 2L - 119140 119282 lincRNA_intron-lincRNA_exon CG4822 FlyBase G6315.1 AGTGGATTACTGAATTGCGTTCCCATAAATATTGGTGTAATTCATAGACTGATGTCCTGGACTCACAGTTTACCGTACTAGAAATGATGATTTTGGCGGCAAACTTGAAGTTGGGAAAAGAACTAAATTTAAAACAAAAGCTA 189 119238 0.984613655 23 179 1440 0.947136564 1.48734042 0.348017621 0.169312169 0.308370044 189 6 6 215 2L:119140-119282 7 CG4822 FBtr0100309 117077 119269 AGACTGA 7mer-A1 dme-miR-14-3p 2L - 119140 119255 3'utr CG4822 FlyBase G4932.1 AATATTGGTGTAATTCATAGACTGATGTCCTGGACTCACAGTTTACCGTACTAGAAATGATGATTTTGGCGGCAAACTTGAAGTTGGGAAAAGAACTAAATTTAAAACAAAAGCTA 131 119238 0.921793217 20 123 950 0.921658986 1.397940009 0.313364055 0.419847328 0.649769585 131 10 7 200 2L:119140-119255 7 114.5 75 FBgn0031220 2984.836667 134.1266667 204.7566667 0.038360558 0.85367066 0.559200352 1 1 1 0.2 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2L 11985312 11985317 - 2L_11985312_11985317_- 0.998626137 0.556464007 0.777545072 0.312655819 CG6686 FBtr0301171 11984325 11987330 2L - 11985309 11985357 5'utr CG6686 FlyBase G10173.1 GGCGGGCAACCGTAATGAGGACTCCAATGACATGATGGACTTTGACAAG 17 11985322 0.960565574 4 17 85 1 1.322219295 0.19047619 0.176470588 0.333333333 17 0 0 21 2L:11985309-11985357 6 CG6686 FBtr0301171 11984325 11987330 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2L - 11985256 11985341 5'utr CG6686 FlyBase G7850.1 GAGGACTCCAATGACATGATGGACTTTGACAAGACCGAACAGCCGGAGGAGCATATGGAAACACATACCGATGAGCCTGCCCTGAG 22 11985322 0.961757567 5 21 104 0.971428571 1.531478917 0.2 0.363636364 0.6 22 1 0 34 2L:11985256-11985341 6 16.5 76 FBgn0032388 1118.523333 42.80333333 65.72 0.014751592 0.385483997 0.251065125 5 5 5 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 2L 11985976 11985982 - 2L_11985976_11985982_- 0.520739298 0.516698985 0.518719141 0.002856924 CG6686 FBtr0301171 11984325 11987330 2L - 11985857 11986018 5'utr CG6686 FlyBase G10176.1 TGAAATGGAAGGTCAGCCGAAAAAGCGCAAGAACTTTGTGATTGGTGAGAATATGGATGAGGAGCGGGAGCACAGACGCAAGCTCCTGGAGATTAAGACCAAATTAGCCGGCAAGCGTTTGGAAACCTTGGAGGACACCAATCTGCAGCTAGCATCGGACAC 302 11985976 0.765601636 18 295 1655 0.979591837 2.049218023 0.131195335 0.11589404 0.221574344 302 5 2 336 2L:11985857-11986018 7 CG6686 FBtr0301171 11984325 11987330 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 11985896 11986011 5'utr CG6686 FlyBase G7852.1 GAAGGTCAGCCGAAAAAGCGCAAGAACTTTGTGATTGGTGAGAATATGGATGAGGAGCGGGAGCACAGACGCAAGCTCCTGGAGATTAAGACCAAATTAGCCGGCAAGCGTTTGGA 181 11985976 0.969730041 13 178 1007 0.988847584 2.123851641 0.130111524 0.342541436 0.557620818 181 2 1 266 2L:11985896-11986011 7 183 77 FBgn0032388 1118.523333 42.80333333 65.72 0.163608567 4.275367962 2.784540475 -6 -6 -6 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 11988953 11988959 - 2L_11988953_11988959_- 0.620133352 0.421296511 0.520714931 0.14059892 zuc FBtr0080316 11988733 11989062 2L - 11988928 11988978 3'utr zuc FlyBase G10182.1 TTAAACTAAAACTTTTTAAGGCAGCTTGATCTTCACACACAAAGGAGTGCC 41 11988953 0.970892376 5 41 240 1 1.716003344 0.057692308 0.195121951 0.365384615 41 0 0 52 2L:11988928-11988978 7 zuc FBtr0080316 11988733 11989062 GGCAGCT 7mer-m8 dme-miR-980-3p 2L - 11988932 11988973 3'utr zuc FlyBase G7858.1 CTAAAACTTTTTAAGGCAGCTTGATCTTCACACACAAAGGAG 26 11988952 0.963710235 5 25 158 0.975609756 1.301029996 0 0.384615385 0.609756098 26 0 1 40 2L:11988932-11988973 7 33.5 78 FBgn0261266 108.3366667 11.63 17.8 0.309221255 2.880481513 1.882022472 -6 -7 -6.5 0.2 dme-miR-1006-3p 6mer2-7 GAATTT 2L 11996408 11996413 + 2L_11996408_11996413_+ 0.993482512 0.996552269 0.99501739 0.002170676 Qtzl FBtr0080288|FBtr0339524 11996242|11996242 11996469|11996723 2L + 11996377 11996451 3'utr Qtzl FlyBase G4156.1 GTCAATTAGGATGAGTGTTTCTAGGCTAAAAGAATTTTCCTTATCCTTCTAAATCCGATACCATATTTATGTAAC 15 11996430 0.956330228 11 14 152 0.882352941 1.176091259 0.058823529 0.133333333 0.235294118 15 2 0 15 2L:11996377-11996451 6 Qtzl FBtr0080288|FBtr0339524 11996242|11996242 11996469|11996723 GAATTT 6mer2-7 dme-miR-1006-3p 2L + 11996382 11996446 3'utr Qtzl FlyBase G3261.1 TTAGGATGAGTGTTTCTAGGCTAAAAGAATTTTCCTTATCCTTCTAAATCCGATACCATATTTAT 19 11996412 0.723687559 11 16 173 0.740740741 1.301029996 0 0.263157895 0.481481481 19 7 0 20 2L:11996382-11996446 6 11 79 FBgn0051864 168.2133333 28.36333333 43.04666667 0.065393152 0.387824656 0.255536627 -22 -4 -13 0.2 dme-miR-79-3p 6mer3-8 TAGCTT 2L 12045461 12045466 - 2L_12045461_12045466_- 0.991060885 0.966984843 0.979022864 0.017024374 CG6770 FBtr0080306 12045341 12045765 2L - 12045405 12045488 3'utr CG6770 FlyBase G10210.1 AAAGAAAGGCACATACTACTCTTAGCTTCTAATATATTCCTAAACTAATTCAGACTTGCAAGTTTTAGTTGCTAAGCCTTAGAG 55 12045467 0.907090788 16 54 414 0.985714286 1.537819095 0.085714286 0.218181818 0.385714286 55 0 1 69 2L:12045405-12045488 6 CG6770 FBtr0080306 12045341 12045765 TAGCTT 6mer3-8 dme-miR-79-3p 2L - 12045410 12045488 3'utr CG6770 FlyBase G7875.2 AAAGAAAGGCACATACTACTCTTAGCTTCTAATATATTCCTAAACTAATTCAGACTTGCAAGTTTTAGTTGCTAAGCCT 35 12045467 0.932264527 12 33 278 0.888888889 1.204119983 0.037037037 0.371428571 0.592592593 35 4 2 48 2L:12045410-12045488 6 26 80 FBgn0032400 867.8766667 144.29 222.0833333 0.029958174 0.180192668 0.117073171 1 1 1 0.2 dme-miR-1006-3p 8mer-A1 CGAATTTA 2L 12045681 12045688 - 2L_12045681_12045688_- 0.671183569 0.67131229 0.67124793 9.10E-05 CG6770 FBtr0080306 12045341 12045765 2L - 12045668 12045787 stop_codon CG6770 FlyBase G10211.2 AGCCGCCGCCTGCAAGAACTGATGCAGGGCATCGACGGAGGCGGTGGAACAGGAGAGAAAGAAGTAACGGGGCCGCGCTGAAAGGAGAAAAGAAATCTTCGAATTTAAAAGGAAAGCAAA 122 12045689 0.979955211 8 116 547 0.951048951 2.133538908 0.181818182 0.163934426 0.286713287 122 7 0 136 2L:12045668-12045787 8 CG6770 FBtr0080306 12045341 12045765 CGAATTTA 8mer-A1 dme-miR-1006-3p 2L - 12045670 12045740 3'utr CG6770 FlyBase G7878.1 AACAGGAGAGAAAGAAGTAACGGGGCCGCGCTGAAAGGAGAAAAGAAATCTTCGAATTTAAAAGGAAAGCA 67 12045689 0.959389796 5 65 316 0.97826087 1.954242509 0.097826087 0.268656716 0.467391304 67 2 0 90 2L:12045670-12045740 8 84.5 81 FBgn0032400 867.8766667 144.29 222.0833333 0.097364065 0.58562617 0.380487805 1 1 1 0.2 dme-bantam-3p 7mer-m8 TGATCTC 2L 12100792 12100798 - 2L_12100792_12100798_- 0.661288404 0.661493716 0.66139106 0.000145169 Patsas FBtr0080362 12100763 12101247 2L - 12100777 12100819 3'utr Patsas FlyBase G10238.1 TGTATAAAATGTGTTATTTAATGATCTCTATATATTATATACC 15 12100798 0.929621022 6 13 180 0.894736842 1.230448921 0.684210526 0.266666667 0.421052632 15 2 0 17 2L:12100777-12100819 7 Patsas FBtr0080362 12100763 12101247 TGATCTC 7mer-m8 dme-bantam-3p 2L - 12100782 12100818 3'utr Patsas FlyBase G7899.1 GTATAAAATGTGTTATTTAATGATCTCTATATATTAT 10 12100791 0.887344079 5 9 113 0.933333333 1.146128036 0.6 0.4 0.6 10 1 0 14 2L:12100782-12100818 7 12.5 82 FBgn0029137 12.51333333 0.613333333 0.946666667 0.99893447 20.38043478 13.20422535 0 -7 -3.5 0.2 dme-miR-970-3p 8mer-A1 TCTTATGA 2L 12107479 12107486 - 2L_12107479_12107486_- 0.627669603 0.630790217 0.62922991 0.002206597 Rab6 FBtr0346437|FBtr0080361 12107219|12107285 12108172|12108172 2L - 12107475 12107540 3'utr Rab6 FlyBase G10239.1 GCGAACGCGACTGCTAACTGGAACTGTGGATGGCATAGGACTTGGCCACGTGCATCTTATGAATAA 10 12107498 0.938815867 6 9 54 0.9 0.954242509 0.4 0 0 10 1 0 9 2L:12107475-12107540 8 Rab6 FBtr0346437|FBtr0080361 12107219|12107285 12108172|12108172 TCTTATGA 8mer-A1 dme-miR-970-3p 2L - 12107470 12107548 3'utr Rab6 FlyBase G7901.1 TTAGCACAGCGAACGCGACTGCTAACTGGAACTGTGGATGGCATAGGACTTGGCCACGTGCATCTTATGAATAAATATA 10 12107516 0.963745132 8 10 55 1 1.079181246 0.083333333 0.2 0.333333333 10 0 0 12 2L:12107470-12107548 8 3 83 FBgn0015797 1477.666667 97.91333333 149.3266667 0.002030228 0.030639341 0.020090183 12 30 21 0.2 dme-miR-317-3p 8mer-A1 TGTGTTCA 2L 12107651 12107658 - 2L_12107651_12107658_- 0.630920783 0.630902751 0.630911767 1.27E-05 Rab6 FBtr0346437|FBtr0080361 12107219|12107285 12108172|12108172 2L - 12107636 12107688 3'utr Rab6 FlyBase G10240.1 CCAGCAGTCGTAGATACCACGCAGCCAGTCTGTGTTCAATGATTCCACCAGCC 63 12107659 0.828854345 9 58 416 0.943661972 1.826074803 0.183098592 0.111111111 0.211267606 63 4 0 67 2L:12107636-12107688 8 Rab6 FBtr0346437|FBtr0080361 12107219|12107285 12108172|12108172 TGTGTTCA 8mer-A1 dme-miR-317-3p 2L - 12107626 12107690 3'utr Rab6 FlyBase G7902.1 CTCCAGCAGTCGTAGATACCACGCAGCCAGTCTGTGTTCAATGATTCCACCAGCCAGGCATTTTG 26 12107659 0.97817345 8 24 159 0.941176471 1.505149978 0.205882353 0.269230769 0.441176471 26 2 0 32 2L:12107626-12107690 8 38 84 FBgn0015797 1477.666667 97.91333333 149.3266667 0.025716219 0.388098318 0.254475646 1 1 1 0.2 dme-miR-252-5p 7mer-m8 GTACTTA 2L 12107740 12107746 - 2L_12107740_12107746_- 0.502981493 0.445765137 0.474373315 0.040458104 Rab6 FBtr0346437|FBtr0080361 12107219|12107285 12108172|12108172 2L - 12107713 12107763 3'utr Rab6 FlyBase G10241.1 AAAAAACCCAAGACCATGTACTTATGTCAGGCCAGGCGGTCCCAGGATCCT 18 12107747 0.958349405 3 17 84 1 1.255272505 0.055555556 0 0 18 0 0 18 2L:12107713-12107763 7 Rab6 FBtr0346437|FBtr0080361 12107219|12107285 12108172|12108172 GTACTTA 7mer-m8 dme-miR-252-5p 2L - 12107718 12107762 3'utr Rab6 FlyBase G7903.1 AAAAACCCAAGACCATGTACTTATGTCAGGCCAGGCGGTCCCAGG 13 12107747 0.966781849 2 12 64 0.944444444 1.230448921 0 0.384615385 0.555555556 13 1 0 17 2L:12107718-12107762 7 14.5 85 FBgn0015797 1477.666667 97.91333333 149.3266667 0.009812768 0.148090148 0.097102549 1 1 1 0.2 dme-miR-184-3p 8mer-A1 TCCGTCCA 2L 12173897 12173904 + 2L_12173897_12173904_+ 0.630996579 0.630998703 0.630997641 1.48E-06 crok FBtr0080342 12173602 12174091 2L + 12173829 12173970 3'utr crok FlyBase G4207.1 GAGCGATGTGTAATCAAGTGCCTTTTCTGTAACGGACTCGTATTGTAACTTAAGCCTGGAATACTATTTCCGTCCAAAAAATATCTTACGCCTATGACATTCCATCTCGTAAACTGAATCTTGTAATACTTTCTATTTTCTA 765 12173896 0.979153126 20 743 5110 0.973952435 2.633468456 0.005662514 0.130718954 0.246885617 765 22 1 860 2L:12173829-12173970 8 crok FBtr0080342 12173602 12174091 TCCGTCCA 8mer-A1 dme-miR-184-3p 2L + 12173828 12173960 3'utr crok FlyBase G3289.1 TGAGCGATGTGTAATCAAGTGCCTTTTCTGTAACGGACTCGTATTGTAACTTAAGCCTGGAATACTATTTCCGTCCAAAAAATATCTTACGCCTATGACATTCCATCTCGTAAACTGAATCTTGTAATACTTT 477 12173896 0.978275238 23 460 3084 0.958333333 2.139879086 0.005555556 0.368972746 0.581944444 477 26 4 690 2L:12173828-12173960 8 568.5 86 FBgn0032421 76 9.133333333 13.88666667 7.480263158 62.24452555 40.93855017 1 1 1 0.2 dme-miR-932-5p 6mer3-8 GGAATT 2L 122680 122685 - 2L_122680_122685_- 0.590409845 0.52136355 0.555886698 0.048823036 CG3164 FBtr0078153|FBtr0078155|FBtr0100379|FBtr0078154 122622|122622|122622|122622 123128|123128|123128|123128 2L - 122668 122710 3'utr CG3164 FlyBase G6327.1 TATTCAAGGTACTTTAAGACCCTTTGGAATTTTTTGTAATATT 11 122687 0.755698906 5 10 90 1 1.230448921 0 0.363636364 0.588235294 11 0 0 17 2L:122668-122710 6 CG3164 FBtr0100379|FBtr0078154|FBtr0078153|FBtr0078155 122622|122622|122622|122622 123128|123128|123128|123128 GGAATT 6mer3-8 dme-miR-932-5p 2L - 122639 122703 3'utr CG3164 FlyBase G4943.1 GGTACTTTAAGACCCTTTGGAATTTTTTGTAATATTTTCTTATTACAGGTTTAGAATAAACATTT 17 122678 0.819502112 10 15 162 0.863636364 0.67669361 0.090909091 0.294117647 0.454545455 17 0 3 19 2L:122639-122703 6 9 87 FBgn0025683 1716.21 73.79 112.3166667 0.005244113 0.121967746 0.080130583 2 -7 -2.5 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2L 12403483 12403489 - 2L_12403483_12403489_- 0.763299252 0.815794627 0.789546939 0.037119783 vir-1 FBtr0100125|FBtr0334761|FBtr0080390|FBtr0080389|FBtr0305263 12403268|12403268|12403268|12403268|12403268 12403580|12403580|12403580|12403580|12403580 2L - 12403453 12403525 3'utr vir-1 FlyBase G10254.1 GCTTGTAAACATAAAACGAGGATATCTCTGAGAGATCCAAAGAAATCGGCGCTCATTTCATCCGTAATTTATC 24 12403497 0.817183334 5 22 114 0.933333333 1.447158031 0.1 0.208333333 0.366666667 24 2 0 28 2L:12403453-12403525 7 vir-1 FBtr0305263|FBtr0080389|FBtr0080390|FBtr0334761|FBtr0100125 12403268|12403268|12403268|12403268|12403268 12403580|12403580|12403580|12403580|12403580 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 12403457 12403513 3'utr vir-1 FlyBase G7914.1 AAAACGAGGATATCTCTGAGAGATCCAAAGAAATCGGCGCTCATTTCATCCGTAATT 24 12403497 0.730113815 8 21 110 0.857142857 0.77815125 0.142857143 0.333333333 0.542857143 24 1 4 30 2L:12403457-12403513 7 16.5 88 FBgn0043841 3920.323333 419.3833333 639.8233333 0.004208837 0.039343481 0.025788369 8 8 8 0.2 dme-miR-277-3p 6mer2-7 GCATTT 2L 12403547 12403552 - 2L_12403547_12403552_- 0.936515741 0.959439645 0.947977693 0.016209645 vir-1 FBtr0100125|FBtr0334761|FBtr0080390|FBtr0080389|FBtr0305263 12403268|12403268|12403268|12403268|12403268 12403580|12403580|12403580|12403580|12403580 2L - 12403539 12403756 stop_codon vir-1 FlyBase G10255.1 ATATCGAGGAGAACTTTGTGCCCATTGACCTATCCAACGATATAGCCGTCAACGATTTGGCTGCCGCAGATCCCAATTTTCCCATCAATGAAGATGCCGAGTTCATTGTGCACCCAGCTGTAATCAGAACTATGCCTATGTTCGAGAAGCTTTCTTTAGGAGAGCCTGCGAAATGAGGTTTCTAAGTCTCTCCCACTAGTCTAGGCATTTTCTTTTAG 70 12403555 0.978626008 31 63 423 0.91025641 1.851258349 0.192307692 0.1 0.192307692 70 7 0 71 2L:12403539-12403756 6 vir-1 FBtr0305263|FBtr0080389|FBtr0080390|FBtr0334761|FBtr0100125 12403268|12403268|12403268|12403268|12403268 12403580|12403580|12403580|12403580|12403580 GCATTT 6mer2-7 dme-miR-277-3p 2L - 12403546 12403665 stop_codon vir-1 FlyBase G7915.1 AGATGCCGAGTTCATTGTGCACCCAGCTGTAATCAGAACTATGCCTATGTTCGAGAAGCTTTCTTTAGGAGAGCCTGCGAAATGAGGTTTCTAAGTCTCTCCCACTAGTCTAGGCATTTT 26 12403555 0.977444407 14 26 171 1 1.612783857 0.341463415 0.461538462 0.658536585 26 0 0 41 2L:12403546-12403665 6 16 89 FBgn0043841 3920.323333 419.3833333 639.8233333 0.004081296 0.038151254 0.025006903 3 3 3 0.2 dme-miR-1003-3p 6mer2-7 TGTGAG 2L 12426966 12426971 - 2L_12426966_12426971_- 0.997369189 0.988092726 0.992730958 0.006559476 CG5446 FBtr0080388|FBtr0333093|FBtr0333094 12426898|12426898|12426629 12427225|12427225|12427225 2L - 12426938 12426988 3'utr CG5446 FlyBase G10266.1 AAGTAAAGTAATTCTTTTGTGAGCAATGGCCAATAATTTTGAATTATTGCC 11 12426973 0.986215474 5 10 86 0.916666667 0.740362689 0 0.090909091 0.166666667 11 0 1 11 2L:12426938-12426988 6 CG5446 FBtr0333094|FBtr0080388|FBtr0333093 12426629|12426898|12426898 12427225|12427225|12427225 TGTGAG 6mer2-7 dme-miR-1003-3p 2L - 12426949 12426982 3'utr CG5446 FlyBase G7925.1 AGTAATTCTTTTGTGAGCAATGGCCAATAATTTT 5 12426972 0.643184605 3 5 44 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2L:12426949-12426982 6 7.5 90 FBgn0032429 186 33.08333333 50.87 0.040322581 0.226700252 0.147434637 2 1 1.5 0.2 dme-miR-277-3p 6mer3-8 TGCATT 2L 12439867 12439872 + 2L_12439867_12439872_+ 0.486813749 0.597935948 0.542374848 0.078575261 Elf FBtr0333089|FBtr0080369|FBtr0344859|FBtr0333090 12439563|12439563|12439563|12439563 12441279|12440602|12440602|12440602 2L + 12439793 12439890 3'utr Elf FlyBase G4233.1 CGGAACGGAACGGCAATGTAGGCAGGCGAAAAGTTAATTTACAACAAGGACGAGTTCGGAGATAGAAACAGAAATGCATTATATACGAATTATAAACT 42 12439871 0.958182844 9 40 195 0.978723404 1.662757832 0.085106383 0.119047619 0.212765957 42 1 0 46 2L:12439793-12439890 6 Elf FBtr0344859|FBtr0333090|FBtr0333089|FBtr0080369 12439563|12439563|12439563|12439563 12440602|12440602|12441279|12440602 TGCATT 6mer3-8 dme-miR-277-3p 2L + 12439838 12439876 3'utr Elf FlyBase G3312.1 AAGGACGAGTTCGGAGATAGAAACAGAAATGCATTATAT 18 12439871 0.69487766 5 16 91 0.916666667 1.342422681 0 0.333333333 0.5 18 2 0 22 2L:12439838-12439876 6 24.5 91 FBgn0020443 5168.45 195.0133333 300.5566667 0.004740299 0.125632435 0.08151541 -4 -4 -4 0.2 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA 2L 12440009 12440016 + 2L_12440009_12440016_+ 0.447563469 0.443420452 0.445491961 0.002929543 Elf FBtr0333089|FBtr0080369|FBtr0344859|FBtr0333090 12439563|12439563|12439563|12439563 12441279|12440602|12440602|12440602 2L + 12439984 12440026 3'utr Elf FlyBase G4234.1 TATATATGCAAAGAGAGAGAAAGAGTTGAAGAAGAGGAGTTGC 14 12440009 0.848260403 4 12 29 0.85 1.230448921 0.45 0.285714286 0.5 14 3 0 17 2L:12439984-12440026 8 Elf FBtr0344859|FBtr0333090|FBtr0333089|FBtr0080369 12439563|12439563|12439563|12439563 12440602|12440602|12441279|12440602 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p 2L + 12439981 12440027 3'utr Elf FlyBase G3313.1 ACGTATATATGCAAAGAGAGAGAAAGAGTTGAAGAAGAGGAGTTGCA 9 12440009 0.755924404 3 8 20 0.923076923 0.77815125 0.461538462 0.444444444 0.615384615 9 0 1 12 2L:12439981-12440027 8 10 92 FBgn0020443 5168.45 195.0133333 300.5566667 0.001934816 0.051278545 0.033271596 0 0 0 0.2 dme-miR-970-3p 8mer-A1 TCTTATGA 2L 12452005 12452012 - 2L_12452005_12452012_- 0.630760082 0.630787174 0.630773628 1.92E-05 CG5418 FBtr0080382 12451943 12452060 2L - 12451966 12452021 3'utr CG5418 FlyBase G10276.1 TTTAATTGTTCTTATGATTTGTCTTGGCACATTGGATCGATCTTAAGTTTACGAAT 10 12452012 0.9944873 6 9 113 0.833333333 1 0.083333333 0.2 0.333333333 10 2 0 10 2L:12451966-12452021 8 CG5418 FBtr0080382 12451943 12452060 TCTTATGA 8mer-A1 dme-miR-970-3p 2L - 12451972 12452029 3'utr CG5418 FlyBase G7931.1 AGAATAACTTTAATTGTTCTTATGATTTGTCTTGGCACATTGGATCGATCTTAAGTTT 8 12452010 0.988322705 7 8 81 1 1 0.3 0.125 0.3 8 0 0 10 2L:12451972-12452029 8 5.5 93 FBgn0032436 3.666666667 0.376666667 0.583333333 1.5 14.60176991 9.428571429 0 -2 -1 0.2 dme-miR-12-5p 6mer2-7 ATACTC 2L 12455886 12455891 - 2L_12455886_12455891_- 0.621788708 0.731774353 0.67678153 0.077771634 bun FBtr0339528|FBtr0300523|FBtr0299652 12455538|12455538|12455538 12457755|12457755|12457755 2L - 12455650 12455934 3'utr bun FlyBase G10281.2 GAAAATTATCATCCAAAATGAAAAGGGATTAAAACCAAATATGATACTCCAACTCCAAGTGCCGAAAACTAGCTGTCTACAGGGCAAACACCAATGGACAGACAAATCAGATAGACGGACGGACAGGACAGACTAATGTCACATCCCCCGAACACAGTAATTCTGTTGAAAAGTATTTCCCTTTATGATTTTTGTATTCAATTCAGAGAACCATCTTCATGCGTTTCATGTTTAGTTCTTCTCCTATGAGTTTTACGACTTAAGCCTCTTTTTAAGCTAACTATT 150 12455893 0.986153183 28 145 814 0.966850829 2.243038049 0.082872928 0.173333333 0.314917127 150 6 0 175 2L:12455650-12455934 6 bun FBtr0299652|FBtr0300523|FBtr0339528 12455538|12455538|12455538 12457755|12457755|12457755 ATACTC 6mer2-7 dme-miR-12-5p 2L - 12455845 12455994 3'utr bun FlyBase G7938.1 AGAACACAAAATGCAGCCTGCGGAGACGCAAATTGTCTAAGGCTAGCGTGGATTAAACAAGAAAATTATCATCCAAAATGAAAAGGGATTAAAACCAAATATGATACTCCAACTCCAAGTGCCGAAAACTAGCTGTCTACAGGGCAAACA 68 12455893 0.953924569 12 62 283 0.934065934 1.929418926 0.021978022 0.25 0.43956044 68 6 0 85 2L:12455845-12455994 6 65.5 94 FBgn0259176 10573.67 421.1233333 647.0833333 0.006194633 0.155536383 0.101223439 2 2 2 0.2 dme-miR-980-5p 7mer-m1 AAAAACT 2L 12456500 12456506 - 2L_12456500_12456506_- 0.742231298 0.635627393 0.688929346 0.075380341 bun FBtr0339528|FBtr0300523|FBtr0299652 12455538|12455538|12455538 12457755|12457755|12457755 2L - 12456494 12456538 3'utr bun FlyBase G10285.1 AGAAAGCTTATCAAAATTGTTTGTTAAACTCTAAAAACTATCTGC 5 12456517 0.987093955 4 5 39 1 0.698970004 0 0 0 5 0 0 5 2L:12456494-12456538 7 bun FBtr0299652|FBtr0300523|FBtr0339528 12455538|12455538|12455538 12457755|12457755|12457755 AAAAACT 7mer-m1 dme-miR-980-5p 2L - 12456445 12456538 3'utr bun FlyBase G7943.1 AGAAAGCTTATCAAAATTGTTTGTTAAACTCTAAAAACTATCTGCAAACAAAAAACCCAAAAATATCTGTAAATATTGTGTAAAACTAAAAACT 11 12456498 0.98448074 8 8 64 0.684210526 1.113943352 0 0.545454545 0.736842105 11 6 0 13 2L:12456445-12456538 7 3.5 95 FBgn0259176 10573.67 421.1233333 647.0833333 0.000331011 0.008311104 0.005408886 11 -8 1.5 0.2 dme-miR-988-3p 8mer-m1 ACAAGGGG 2L 12456705 12456712 - 2L_12456705_12456712_- 0.62486762 0.622721838 0.623794729 0.00151731 bun FBtr0339528|FBtr0299658|FBtr0346622|FBtr0300523|FBtr0300522|FBtr0299652|FBtr0300524|FBtr0299656 12455538|12456575|12456575|12455538|12456575|12455538|12456575|12456575 12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755 2L - 12456644 12456738 3'utr bun FlyBase G10287.1 TTAATCCTAACTTTTATTGTAAAAATACAAGGGGAAATATTAACTACATCATAAATATGAATATGTTTCAAATTAAACAATGGATAACAAAAAAA 88 12456713 0.965473444 13 80 418 0.95412844 2.017033339 0.027522936 0.215909091 0.366972477 88 5 0 104 2L:12456644-12456738 8 bun FBtr0300524|FBtr0299656|FBtr0300522|FBtr0299652|FBtr0346622|FBtr0300523|FBtr0339528|FBtr0299658 12456575|12456575|12456575|12455538|12456575|12455538|12455538|12456575 12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755 ACAAGGGG 8mer-m1 dme-miR-988-3p 2L - 12456647 12456735 3'utr bun FlyBase G7945.1 ATCCTAACTTTTATTGTAAAAATACAAGGGGAAATATTAACTACATCATAAATATGAATATGTTTCAAATTAAACAATGGATAACAAAA 59 12456713 0.973930095 10 53 322 0.916666667 1.58546073 0.05952381 0.355932203 0.547619048 59 6 1 77 2L:12456647-12456735 8 67 96 FBgn0259176 10573.67 421.1233333 647.0833333 0.006336494 0.159098285 0.103541533 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 12708635 12708640 + 2L_12708635_12708640_+ 0.991009339 0.999994445 0.995501892 0.006353425 CG6180 FBtr0080398|FBtr0080398|FBtr0080398 12708543|12708543|12708543 12708680|12708680|12708680 2L + 12708558 12708658 3'utr CG6180 FlyBase G4258.1 AACCATGCTTATATAAGCCAGTCTGAATTGGATTCAAATCTATTGTAACCTAGAAATTAAAGACACCTATGAACACTCTGTGAAACCCTCTGTTGCTGGCA 130 12708634 0.763928041 15 117 729 0.896774194 1.540954809 0.24516129 0.184615385 0.316129032 130 13 3 139 2L:12708558-12708658 6 CG6180 FBtr0080398|FBtr0080398|FBtr0080398 12708543|12708543|12708543 12708680|12708680|12708680 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 12708550 12708662 3'utr CG6180 FlyBase G3331.1 ACGCCAAAAACCATGCTTATATAAGCCAGTCTGAATTGGATTCAAATCTATTGTAACCTAGAAATTAAAGACACCTATGAACACTCTGTGAAACCCTCTGTTGCTGGCAATAA 62 12708633 0.961440018 17 59 339 0.955555556 1.633468456 0.144444444 0.274193548 0.5 62 3 1 86 2L:12708550-12708662 6 69 97 FBgn0032453 1365.473333 166.0266667 253.2533333 0.050531928 0.415595888 0.272454459 1 2 1.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 12713306 12713313 - 2L_12713306_12713313_- 0.350998653 0.330280797 0.340639725 0.014649768 Pih1D1 FBtr0089908|FBtr0089908|FBtr0089908 12713274|12713274|12713274 12713339|12713339|12713339 2L - 12713276 12713327 3'utr Pih1D1 FlyBase G10347.1 ATGAATAATGCCCGCTGTGATAATGTTAATAAAGGCGCAAATTTTACAATTT 35 12713319 0.977756556 6 33 220 0.959183673 1.672097858 0.204081633 0.285714286 0.489795918 35 2 0 47 2L:12713276-12713327 8 Pih1D1 FBtr0089908|FBtr0089908|FBtr0089908 12713274|12713274|12713274 12713339|12713339|12713339 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 12713276 12713327 3'utr Pih1D1 FlyBase G8000.1 ATGAATAATGCCCGCTGTGATAATGTTAATAAAGGCGCAAATTTTACAATTT 30 12713319 0.763971088 8 25 189 0.891304348 1.612783857 0.130434783 0.366666667 0.586956522 30 5 0 41 2L:12713276-12713327 8 31.5 98 FBgn0032455 841.0766667 43.54 66.97 0.037451996 0.723472669 0.470359863 6 6 6 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 12744636 12744643 + 2L_12744636_12744643_+ 0.496680896 0.498892801 0.497786849 0.001564049 MRP FBtr0090014|FBtr0090013|FBtr0090027|FBtr0090022|FBtr0090024|FBtr0090028|FBtr0090017|FBtr0090026|FBtr0090020|FBtr0090016|FBtr0090021|FBtr0090029|FBtr0090015|FBtr0090023|FBtr0090025|FBtr0090019|FBtr0090018 12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170 12744806|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807 2L + 12744614 12744771 3'utr MRP FlyBase G4271.1 CTTATGTATGCCACATATTTATGTACTTAAATTAACAAATCAGAAGATTGAGATACTACTTAAACTCCCTCAAGAATTTTTGCCTTCAACTGATAAGATCAGTACGAAAAACGGTCAATGTAGTTAAATCAATTTATTGAAACTTTTGTAGATTGTAT 56 12744635 0.854623124 15 52 464 0.935483871 1.462397998 0.064516129 0.107142857 0.193548387 56 3 1 58 2L:12744614-12744771 8 MRP FBtr0090015|FBtr0090023|FBtr0090026|FBtr0090019|FBtr0090018|FBtr0090016|FBtr0090020|FBtr0090029|FBtr0090021|FBtr0090025|FBtr0090014|FBtr0090028|FBtr0090027|FBtr0090017|FBtr0090024|FBtr0090013|FBtr0090022 12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170 12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744806|12744807|12744807|12744807|12744807|12744807|12744807 GTACTTAA 8mer-A1 dme-miR-252-5p 2L + 12744620 12744653 3'utr MRP FlyBase G3341.1 TATGCCACATATTTATGTACTTAAATTAACAAAT 13 12744634 0.690525964 3 12 122 0.888888889 1.204119983 0 0.307692308 0.5 13 2 0 16 2L:12744620-12744653 8 22 99 FBgn0032456 4513.983333 98.30333333 150.4066667 0.004873744 0.223797091 0.146270112 1 2 1.5 0.2 dme-miR-33-5p 6mer2-7 AATGCA 2L 12817079 12817084 - 2L_12817079_12817084_- 0.999998955 0.997897162 0.998948058 0.001486197 kek1 FBtr0332210 12816998 12819017 2L - 12817051 12817098 3'utr kek1 FlyBase G10356.1 AAAGGCGGGCATTGAATGCATGAAAGCAACTGAATGAACAACAAAGCA 7 12817085 0.914460605 5 6 20 0.857142857 0.77815125 0 0 0 7 1 0 6 2L:12817051-12817098 6 kek1 FBtr0332210 12816998 12819017 AATGCA 6mer2-7 dme-miR-33-5p 2L - 12817052 12817097 3'utr kek1 FlyBase G8009.1 AAGGCGGGCATTGAATGCATGAAAGCAACTGAATGAACAACAAAGC 6 12817085 0.882899209 3 5 14 0.857142857 0.77815125 0.285714286 0.166666667 0.285714286 6 1 0 6 2L:12817052-12817097 6 4.5 100 FBgn0015399 5185.06 109.4633333 168.6866667 0.000867878 0.041109656 0.026676679 1 1 1 0.2 dme-miR-277-3p 7mer-A1 GCATTTA 2L 12817260 12817266 - 2L_12817260_12817266_- 0.782111587 0.818902791 0.800507189 0.026015307 kek1 FBtr0332210 12816998 12819017 2L - 12817247 12817290 3'utr kek1 FlyBase G10358.1 AAAAAAGAGCAAGAAAAAACCGTAGCATTTAAGTTGAACTTATG 6 12817268 0.962192479 3 5 24 0.833333333 0.698970004 0.166666667 0 0 6 1 0 5 2L:12817247-12817290 7 kek1 FBtr0332210 12816998 12819017 GCATTTA 7mer-A1 dme-miR-277-3p 2L - 12817233 12817286 3'utr kek1 FlyBase G8011.1 AAGAGCAAGAAAAAACCGTAGCATTTAAGTTGAACTTATGTATTATGTATTGTA 7 12817265 0.986867539 5 6 56 0.875 0.84509804 0.125 0.142857143 0.25 7 1 0 7 2L:12817233-12817286 7 6 101 FBgn0015399 5185.06 109.4633333 168.6866667 0.001157171 0.054812875 0.035568905 2 -1 0.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 12818801 12818807 - 2L_12818801_12818807_- 0.723928201 0.749728976 0.736828588 0.018243921 kek1 FBtr0332210|FBtr0332210|FBtr0332210 12816998|12816998|12816998 12819017|12819017|12819017 2L - 12818785 12818864 3'utr kek1 FlyBase G10362.1 CTGATAGATAGCTCCGGGGTCCTAGGCGAGCAGCGATTATTGTGCAAGCGAACTGTTTGTGATAGTGTCTGACAAAAAGA 53 12818809 0.96985266 9 49 356 0.972972973 1.380211242 0.216216216 0.301886792 0.5 53 0 2 72 2L:12818785-12818864 7 kek1 FBtr0332210|FBtr0332210|FBtr0332210 12816998|12816998|12816998 12819017|12819017|12819017 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 12818743 12818843 3'utr kek1 FlyBase G8013.1 CTAGGCGAGCAGCGATTATTGTGCAAGCGAACTGTTTGTGATAGTGTCTGACAAAAAGATAATGCGAATGAAGATAATAATTGCCCAAAGCAAAGAGAAAG 25 12818809 0.97937753 8 21 153 0.928571429 1.591064607 0.095238095 0.48 0.69047619 25 3 0 39 2L:12818743-12818843 7 32.5 102 FBgn0015399 5185.06 109.4633333 168.6866667 0.006268008 0.296903073 0.192664901 2 2 2 0.2 dme-miR-1012-3p 7mer-A1 TGACTAA 2L 12818962 12818968 - 2L_12818962_12818968_- 0.60485493 0.78165077 0.69325285 0.12501358 kek1 FBtr0332210 12816998 12819017 2L - 12818935 12819074 stop_codon kek1 FlyBase G10363.1 AGCAGCCGGAATTCGCCGGACGAGGGATACCAGGAAGGATGCGGCACGGATGTGTAAGCGCAGCGCTTCTCGGCGGAAGGAACGGCGAGGAAACCAAACCAAGAACTGACTAAACTTAACACAACTAAACAAGAGATATA 50 12818964 0.870300491 9 48 124 0.967741935 1.477121255 0.096774194 0.18 0.338709677 50 1 1 60 2L:12818935-12819074 7 kek1 FBtr0332210 12816998 12819017 TGACTAA 7mer-A1 dme-miR-1012-3p 2L - 12818939 12819089 stop_codon kek1 FlyBase G8014.1 AGGGCCCTGATCAGCAGCAGCCGGAATTCGCCGGACGAGGGATACCAGGAAGGATGCGGCACGGATGTGTAAGCGCAGCGCTTCTCGGCGGAAGGAACGGCGAGGAAACCAAACCAAGAACTGACTAAACTTAACACAACTAAACAAGAGA 46 12818963 0.858609974 13 44 108 0.942028986 1.210853365 0.173913043 0.391304348 0.594202899 46 1 3 65 2L:12818939-12819089 7 36 103 FBgn0015399 5185.06 109.4633333 168.6866667 0.006943025 0.32887725 0.213413429 -4 -5 -4.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 13001290 13001297 - 2L_13001290_13001297_- 0.631132182 0.631131327 0.631131754 6.36E-07 Vha68-1 FBtr0080429|FBtr0336618 13000768|13000963 13001411|13001411 2L - 13001280 13001347 3'utr Vha68-1 FlyBase G10383.1 AAACGAAATAAGAAACCAAAGCTAGGTTATTATTCGAATTCCCCATTCAATCTAGTCATATTTACATA 15 13001299 0.990715221 5 13 131 0.866666667 0.812913357 0.133333333 0 0 15 1 1 13 2L:13001280-13001347 8 Vha68-1 FBtr0336618|FBtr0080429 13000963|13000768 13001411|13001411 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 13001260 13001312 3'utr Vha68-1 FlyBase G8028.1 GAATTCCCCATTCAATCTAGTCATATTTACATAATGCATAATAAGATATTTGA 9 13001298 0.993367954 5 7 83 0.75 0.653212514 0.083333333 0.333333333 0.5 9 2 1 9 2L:13001260-13001312 8 10.5 104 FBgn0265262 180.4566667 8.25 12.47 0.058185714 1.272727273 0.84202085 2 1 1.5 0.2 dme-miR-92b-3p 6mer2-7 TGCAAT 2L 13022627 13022632 - 2L_13022627_13022632_- 0.999974327 0.999999939 0.999987133 1.81E-05 CG9932 FBtr0310277|FBtr0336617 13021866|13021866 13023322|13023322 2L - 13022604 13022654 3'utr CG9932 FlyBase G10414.1 AAGAAAGTGAGCGCGTATATCATGCAATGAATATGGTACTATATACATACT 24 13022636 0.66228318 6 23 124 0.965517241 1.447158031 0.344827586 0.166666667 0.310344828 24 1 0 28 2L:13022604-13022654 6 CG9932 FBtr0336617|FBtr0310277 13021866|13021866 13023322|13023322 TGCAAT 6mer2-7 dme-miR-92b-3p 2L - 13022601 13022652 3'utr CG9932 FlyBase G8054.1 GAAAGTGAGCGCGTATATCATGCAATGAATATGGTACTATATACATACTATA 19 13022635 0.979678543 6 15 106 0.740740741 1.301029996 0.481481481 0.315789474 0.518518519 19 7 0 20 2L:13022601-13022652 6 20.5 105 FBgn0262160 822.2633333 11.45 17.61 0.024931186 1.790393013 1.1641113 4 3 3.5 0.2 dme-miR-276a-3p 6mer2-7 GTTCCT 2L 13023079 13023084 - 2L_13023079_13023084_- 0.672870915 0.714056774 0.693463844 0.029122829 CG9932 FBtr0310277|FBtr0336616|FBtr0089956|FBtr0336617 13021866|13022669|13022669|13021866 13023322|13023322|13023322|13023322 2L - 13023048 13023102 3'utr CG9932 FlyBase G10418.1 CACACCTAGTTGGAACATGTTCCTGCACTTTTACGTTTTTTCTAGAACCTAAGGT 21 13023085 0.975201836 5 19 162 0.916666667 1.342422681 0.125 0.142857143 0.25 21 2 0 22 2L:13023048-13023102 6 CG9932 FBtr0089956|FBtr0336617|FBtr0310277|FBtr0336616 13022669|13021866|13021866|13022669 13023322|13023322|13023322|13023322 GTTCCT 6mer2-7 dme-miR-276a-3p 2L - 13023048 13023104 3'utr CG9932 FlyBase G8058.1 TACACACCTAGTTGGAACATGTTCCTGCACTTTTACGTTTTTTCTAGAACCTAAGGT 8 13023085 0.979996243 3 7 64 0.916666667 1.041392685 0 0.375 0.583333333 8 1 0 11 2L:13023048-13023104 6 13.5 106 FBgn0262160 822.2633333 11.45 17.61 0.016418098 1.179039301 0.766609881 1 1 1 0.2 dme-miR-282-5p 6mer2-7 GAGGCT 2L 13168888 13168893 + 2L_13168888_13168893_+ 0.972454111 0.938549557 0.955501834 0.023974102 Sir2 FBtr0080434 13168640 13169551 2L + 13168864 13168964 3'utr Sir2 FlyBase G4323.1 CGGATCCACTAGTTTACTCAATTCGAGGCTTTAGAGATCTGACCCTCGTTGCTTTACCACCAACCCCTTATGCCCAATCCCGTTTTGATATTTTTGAAAAA 49 13168894 0.981189427 15 47 343 0.95 1.45484486 0.216666667 0.224489796 0.366666667 49 2 1 57 2L:13168864-13168964 6 Sir2 FBtr0080434 13168640 13169551 GAGGCT 6mer2-7 dme-miR-282-5p 2L + 13168843 13168956 3'utr Sir2 FlyBase G3368.1 GAAGTTTTCAAGAAATGAAACCGGATCCACTAGTTTACTCAATTCGAGGCTTTAGAGATCTGACCCTCGTTGCTTTACCACCAACCCCTTATGCCCAATCCCGTTTTGATATTT 35 13168894 0.974111332 15 35 214 1 1.672097858 0.340425532 0.257142857 0.446808511 35 0 0 47 2L:13168843-13168956 6 29.5 107 FBgn0024291 729.5333333 23.15666667 35.49 0.040436809 1.273931193 0.831220062 -6 -6 -6 0.2 dme-miR-33-5p 7mer-A1 AATGCAA 2L 13169181 13169187 + 2L_13169181_13169187_+ 0.533938018 0.777765255 0.655851637 0.172411937 Sir2 FBtr0080434 13168640 13169551 2L + 13169160 13169277 3'utr Sir2 FlyBase G4325.1 TAACATATTCAAAACTATGCAAATGCAAACGGAAAAATACGTTAGTTTTAGTTAAAAACTAGACACAAACACTCTGTATATAAGCACTCGCCCCTAATTTGTATTGTACATGATTCTT 16 13169177 0.979437784 10 16 112 1 1.255272505 0.333333333 0.125 0.222222222 16 0 0 18 2L:13169160-13169277 7 Sir2 FBtr0080434 13168640 13169551 AATGCAA 7mer-A1 dme-miR-33-5p 2L + 13169143 13169211 3'utr Sir2 FlyBase G3371.1 AAATCTAGTTCTAAGCGTAACATATTCAAAACTATGCAAATGCAAACGGAAAAATACGTTAGTTTTAGT 12 13169177 0.931831143 5 12 51 1 1.278753601 0.473684211 0.5 0.684210526 12 0 0 19 2L:13169143-13169211 7 9 108 FBgn0024291 729.5333333 23.15666667 35.49 0.012336654 0.388656974 0.253592561 4 4 4 0.2 dme-miR-283-5p 8mer-A1 TGATATTA 2L 13178947 13178954 + 2L_13178947_13178954_+ 0.571755547 0.561248522 0.566502035 0.007429571 CG5439 FBtr0080435 13178812 13178978 2L + 13178876 13178970 3'utr CG5439 FlyBase G4333.1 TTTATCTATTTCGTTGTAGATATCTTTATCTATATGTGTAATAACGGAGTTGGTCCAAGTGTTGTAATCATTGATATTAAATAAAGTTAAGCCTT 51 13178946 0.986672498 8 51 490 1 1.740362689 0.090909091 0.058823529 0.127272727 51 0 0 55 2L:13178876-13178970 8 CG5439 FBtr0080435 13178812 13178978 TGATATTA 8mer-A1 dme-miR-283-5p 2L + 13178901 13178969 3'utr CG5439 FlyBase G3378.1 TTATCTATATGTGTAATAACGGAGTTGGTCCAAGTGTTGTAATCATTGATATTAAATAAAGTTAAGCCT 33 13178946 0.989590839 5 32 311 0.980769231 1.707570176 0.019230769 0.424242424 0.634615385 33 1 0 51 2L:13178901-13178969 8 37.5 109 FBgn0032476 436.6666667 29.4 45.33 0.085877863 1.275510204 0.827266711 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 13180752 13180759 - 2L_13180752_13180759_- 0.349794391 0.353935709 0.35186505 0.002928341 CG31849 FBtr0080490|FBtr0080490|FBtr0080490 13180396|13180396|13180396 13180988|13180988|13180988 2L - 13180720 13180786 3'utr CG31849 FlyBase G10472.1 AGCAGACAGGACAGACAGACCCGCCATCTGTGATAAGAAAAACCAGAACTAAACAATGAATTTATGA 48 13180760 0.95162593 4 46 143 0.947368421 1.73239376 0.157894737 0.145833333 0.280701754 48 3 0 54 2L:13180720-13180786 8 CG31849 FBtr0080490|FBtr0080490|FBtr0080490 13180396|13180396|13180396 13180988|13180988|13180988 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 13180746 13180783 3'utr CG31849 FlyBase G8088.1 AGACAGGACAGACAGACCCGCCATCTGTGATAAGAAAA 32 13180760 0.959104993 2 32 96 1 1.602059991 0.175 0.21875 0.375 32 0 0 40 2L:13180746-13180783 8 39 110 FBgn0051849 77.33333333 4.373333333 6.81 0.504310345 8.917682927 5.726872247 1 1 1 0.2 dme-bantam-3p 7mer-m8 TGATCTC 2L 13183895 13183901 - 2L_13183895_13183901_- 0.642118992 0.661221013 0.651670002 0.013507154 CG16974 FBtr0305555 13183847 13185416 2L - 13183856 13183930 3'utr CG16974 FlyBase G10475.1 GGCGACCCTTCCTGTAGTTCCCATCATACTGATCTCCGTTGGGCAGGATGGCCCAACCTCTACCTTGTCTCTGTC 32 13183901 0.999830633 7 30 220 0.973684211 1.267171728 0.078947368 0.15625 0.289473684 32 0 1 37 2L:13183856-13183930 7 CG16974 FBtr0305555 13183847 13185416 TGATCTC 7mer-m8 dme-bantam-3p 2L - 13183858 13183916 3'utr CG16974 FlyBase G8089.1 TAGTTCCCATCATACTGATCTCCGTTGGGCAGGATGGCCCAACCTCTACCTTGTCTCTG 20 13183901 0.985176194 7 18 147 0.857142857 1.380211242 0.178571429 0.3 0.5 20 4 0 24 2L:13183858-13183916 7 24 111 FBgn0032479 2807.686667 76.92 117.31 0.008547962 0.31201248 0.204586139 0 0 0 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 2L 13185071 13185077 - 2L_13185071_13185077_- 0.519421287 0.514985727 0.517203507 0.003136443 CG16974 FBtr0305555|FBtr0080489 13183847|13184945 13185416|13185416 2L - 13185059 13185097 3'utr CG16974 FlyBase G10477.1 TGAAAAGAGAGCCCCCCATTTGTGATTTCATTACTTAAC 15 13185078 0.981420804 4 15 110 1 1.361727836 0.304347826 0.333333333 0.565217391 15 0 0 23 2L:13185059-13185097 7 CG16974 FBtr0080489|FBtr0305555 13184945|13183847 13185416|13185416 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 13185065 13185093 3'utr CG16974 FlyBase G8090.1 AAGAGAGCCCCCCATTTGTGATTTCATTA 11 13185072 0.972060849 4 11 68 1 1.230448921 0.176470588 0.272727273 0.529411765 11 0 0 17 2L:13185065-13185093 7 13 112 FBgn0032479 2807.686667 76.92 117.31 0.004630146 0.16900676 0.110817492 1 -5 -2 0.2 dme-miR-277-3p 7mer-m8 TGCATTT 2L 13196492 13196498 + 2L_13196492_13196498_+ 0.609607258 0.615757686 0.612682472 0.00434899 Edem2 FBtr0080438|FBtr0333235 13196270|13196270 13197281|13197281 2L + 13196457 13196539 3'utr Edem2 FlyBase G4347.1 ATGCCACGAGTTATGGAACTCAGTTTAGGGATCTTTGCATTTCGTGGTTGGTTCTCAGGCAGGCAATTGGCTTCCTAGTGGCT 20 13196491 0.989274348 8 18 169 0.92 1.361727836 0.4 0.2 0.36 20 2 0 23 2L:13196457-13196539 7 Edem2 FBtr0333235|FBtr0080438 13196270|13196270 13197281|13197281 TGCATTT 7mer-m8 dme-miR-277-3p 2L + 13196382 13196540 3'utr Edem2 FlyBase G3385.1 GTAACGTGTGTACAGTAAGCGAACGTAACTAAATTGGAATTTCCTGTACTTTACTAGACATGTAAGAGCGATTTAATGCCACGAGTTATGGAACTCAGTTTAGGGATCTTTGCATTTCGTGGTTGGTTCTCAGGCAGGCAATTGGCTTCCTAGTGGCTA 43 13196491 0.988508391 18 40 372 0.9375 1.77815125 0.4375 0.348837209 0.5625 43 4 0 60 2L:13196382-13196540 7 17.5 113 FBgn0032480 836.01 24.70333333 37.89 0.020932764 0.708406423 0.461863288 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 13197053 13197058 + 2L_13197053_13197058_+ 0.654966936 0.850812759 0.752889847 0.138483964 Edem2 FBtr0080438|FBtr0080438|FBtr0080438|FBtr0333235|FBtr0333235|FBtr0333235 13196270|13196270|13196270|13196270|13196270|13196270 13197281|13197281|13197281|13197281|13197281|13197281 2L + 13197035 13197073 3'utr Edem2 FlyBase G4351.1 TTGTGGATGACAACATATCTGTGAATCGACTAGATGCAA 15 13197052 0.700675943 3 14 93 1 1.230448921 0.235294118 0.133333333 0.235294118 15 0 0 17 2L:13197035-13197073 6 Edem2 FBtr0333235|FBtr0333235|FBtr0333235|FBtr0080438|FBtr0080438|FBtr0080438 13196270|13196270|13196270|13196270|13196270|13196270 13197281|13197281|13197281|13197281|13197281|13197281 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 13197036 13197066 3'utr Edem2 FlyBase G3387.1 TGTGGATGACAACATATCTGTGAATCGACTA 6 13197052 0.707589229 2 4 34 0.857142857 0.77815125 0.142857143 0.166666667 0.285714286 6 1 0 6 2L:13197036-13197066 6 10.5 114 FBgn0032480 836.01 24.70333333 37.89 0.012559658 0.425043854 0.277117973 1 1 1 0.2 dme-bantam-3p 6mer2-7 GATCTC 2L 13289481 13289486 + 2L_13289481_13289486_+ 0.817231972 0.549411413 0.683321692 0.189377762 Uvrag FBtr0080460|FBtr0334865 13289289|13289289 13289556|13289556 2L + 13289438 13289492 3'utr Uvrag FlyBase G4386.1 TGAACGGTAGTCCATTGCGATAATATTATTTTTAGTTGTTTAAGATCTCTGTGTA 19 13289487 0.991711212 6 19 200 1 1.414973348 0.730769231 0.210526316 0.423076923 19 0 0 26 2L:13289438-13289492 6 Uvrag FBtr0334865|FBtr0080460 13289289|13289289 13289556|13289556 GATCTC 6mer2-7 dme-bantam-3p 2L + 13289437 13289499 3'utr Uvrag FlyBase G3415.1 GTGAACGGTAGTCCATTGCGATAATATTATTTTTAGTTGTTTAAGATCTCTGTGTAAATTCCC 21 13289487 0.992520929 7 21 236 1 1.414973348 0.576923077 0.238095238 0.384615385 21 0 0 26 2L:13289437-13289499 6 18 115 FBgn0032499 266.2566667 13.1 20.21333333 0.067603941 1.374045802 0.890501319 -6 -6 -6 0.2 dme-miR-1012-3p 6mer2-7 TGACTA 2L 13301106 13301111 + 2L_13301106_13301111_+ 0.981595663 0.730223215 0.855909439 0.177747199 CG31729 FBtr0080462|FBtr0344140|FBtr0080461|FBtr0344851 13301064|13301064|13301064|13301064 13301668|13301668|13301516|13301516 2L + 13301050 13301119 stop_codon CG31729 FlyBase G4407.1 CTTGAAGCTCTCTTAGATGGCGGCCTGGCAAATGAAATACAAATTACACATTATCCTGACTATAATTTCC 33 13301100 0.943179603 11 32 204 0.975609756 1.602059991 0.024390244 0.212121212 0.365853659 33 1 0 40 2L:13301050-13301119 6 CG31729 FBtr0344851|FBtr0080461|FBtr0344140|FBtr0080462 13301064|13301064|13301064|13301064 13301516|13301516|13301668|13301668 TGACTA 6mer2-7 dme-miR-1012-3p 2L + 13301088 13301122 3'utr CG31729 FlyBase G3429.2 ACAAATTACACATTATCCTGACTATAATTTCCATT 16 13301100 0.755958543 2 13 111 0.782608696 1.255272505 0 0.3125 0.52173913 16 5 0 18 2L:13301088-13301122 6 18 116 FBgn0051729 1443.476667 38.43 58.66333333 0.012469893 0.468384075 0.306835616 6 6 6 0.2 dme-miR-2a-2-5p 8mer-A1 TGATGAGA 2L 13376051 13376058 + 2L_13376051_13376058_+ 0.601031887 0.601117149 0.601074518 6.02E-05 CG6565 FBtr0080468|FBtr0346420|FBtr0342631 13375839|13375839|13375839 13376165|13376404|13376165 2L + 13375998 13376072 3'utr CG6565 FlyBase G4433.1 TCAGAGCAAGTGTGCAATAGGTGGAAGTTTTGCTCTTAACATGAGTGCCACTTTGATGAGAAACTTAAAAATAAA 9 13376050 0.976265819 6 8 49 0.888888889 0.903089987 0.111111111 0 0 9 1 0 8 2L:13375998-13376072 8 CG6565 FBtr0342631|FBtr0080468|FBtr0346420 13375839|13375839|13375839 13376165|13376165|13376404 TGATGAGA 8mer-A1 dme-miR-2a-2-5p 2L + 13376016 13376062 3'utr CG6565 FlyBase G3445.1 AGGTGGAAGTTTTGCTCTTAACATGAGTGCCACTTTGATGAGAAACT 8 13376050 0.978307487 4 7 48 1 1.113943352 0 0.5 0.692307692 8 0 0 13 2L:13376016-13376062 8 6 117 FBgn0032513 608.7166667 34.34 52.78 0.009856803 0.174723355 0.113679424 1 1 1 0.2 dme-miR-986-5p 6mer2-7 TTCGAG 2L 13382259 13382264 + 2L_13382259_13382264_+ 0.866762034 0.953339861 0.910050947 0.06121982 beta'COP FBtr0080469 13382180 13382382 2L + 13382246 13382296 3'utr beta'COP FlyBase G4456.1 ACATTTCGTGCATTTCGAGCCACAGAATTCCGCGCATGCATTCACATTTGA 15 13382273 0.930221863 4 15 60 1 1.342422681 0.272727273 0.4 0.590909091 15 0 0 22 2L:13382246-13382296 6 beta'COP FBtr0080469 13382180 13382382 TTCGAG 6mer2-7 dme-miR-986-5p 2L + 13382248 13382301 3'utr beta'COP FlyBase G3462.1 ATTTCGTGCATTTCGAGCCACAGAATTCCGCGCATGCATTCACATTTGATTTGA 14 13382273 0.783818562 4 13 63 0.956521739 1.342422681 0.565217391 0.428571429 0.652173913 14 1 0 22 2L:13382248-13382301 6 13.5 118 FBgn0025724 1623.336667 63.76333333 97.48 0.008316205 0.211720424 0.138489947 -14 -14 -14 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2L 13385551 13385557 + 2L_13385551_13385557_+ 0.563927075 0.594222832 0.579074953 0.021422295 loqs FBtr0080497|FBtr0342633|FBtr0342632|FBtr0100220|FBtr0080498 13385231|13385231|13385231|13384666|13385231 13385671|13385671|13385671|13385671|13385671 2L + 13385522 13385574 3'utr loqs FlyBase G4461.1 AGACAAGCGTGTAATCGATATTGGAATCTTCTAGTCGCTTTCAAATTCTGAAA 64 13385550 0.987526409 6 64 568 1 1.944482672 0 0.28125 0.477272727 64 0 0 88 2L:13385522-13385574 7 loqs FBtr0342633|FBtr0342632|FBtr0100220|FBtr0080498|FBtr0080497 13385231|13385231|13384666|13385231|13385231 13385671|13385671|13385671|13385671|13385671 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2L + 13385521 13385566 3'utr loqs FlyBase G3466.1 CAGACAAGCGTGTAATCGATATTGGAATCTTCTAGTCGCTTTCAAA 49 13385550 0.98663556 5 49 413 1 1.838849091 0 0.244897959 0.463768116 49 0 0 69 2L:13385521-13385566 7 55.5 119 FBgn0032515 158.85 11.16666667 17.08333333 0.349386213 4.970149254 3.248780488 1 1 1 0.2 dme-miR-932-5p 7mer-A1 GAATTGA 2L 13394348 13394354 - 2L_13394348_13394354_- 0.664504525 0.612720753 0.638612639 0.036616605 RpL24 FBtr0342637 13393685 13394412 2L - 13394339 13394449 stop_codon RpL24 FlyBase G10596.1 GCAGAAGGCTGCTCCCCGCGTCGGAGGCAAGCGGTAAACACCTTTCGCCGGTAGTGATGTGCTAAAGTTAGTCCAGGATTTAAGGAACCACTCGTGAATTGAAAATTAAAC 107 13394351 0.761265761 19 102 506 0.940740741 1.50174373 0.140740741 0.214953271 0.377777778 107 5 3 127 2L:13394339-13394449 7 RpL24 FBtr0342637 13393685 13394412 GAATTGA 7mer-A1 dme-miR-932-5p 2L - 13394304 13394419 stop_codon RpL24 FlyBase G8168.1 GCGGTAAACACCTTTCGCCGGTAGTGATGTGCTAAAGTTAGTCCAGGATTTAAGGAACCACTCGTGAATTGAAAATTAAACAAACGCCGCGAATGCGAATTCGTGGTGACCAAAAA 122 13394351 0.953629484 18 120 547 0.989795918 2.28780173 0.12244898 0.401639344 0.62755102 122 2 0 194 2L:13394304-13394419 7 69.5 120 FBgn0032518 6558.51 1040.203333 1578.5 0.010596919 0.06681386 0.044029142 -3 -3 -3 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 134009 134014 + 2L_134009_134014_+ 0.999657946 0.980153438 0.989905692 0.013791764 Gs1 FBtr0078115|FBtr0078114 133681|133681 134472|134472 2L + 133997 134030 5'utr Gs1 FlyBase G475.1 CGTTAATTTTTTGTACCTTTTAGATCAAACAAAC 13 134016 0.70171495 3 13 147 1 1.204119983 0 0.153846154 0.3125 13 0 0 16 2L:133997-134030 6 Gs1 FBtr0078114|FBtr0078115 133681|133681 134472|134472 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 133996 134027 5'utr Gs1 FlyBase G395.1 ACGTTAATTTTTTGTACCTTTTAGATCAAACA 17 134016 0.742041269 2 17 193 1 1.447158031 0 0.470588235 0.678571429 17 0 0 28 2L:133996-134027 6 15 121 FBgn0001142 30.66666667 1.793333333 2.72 0.489130435 8.364312268 5.514705882 -7 -7 -7 0.2 dme-miR-1007-3p 6mer3-8 TGAGCT 2L 13410801 13410806 + 2L_13410801_13410806_+ 0.998751542 0.998893491 0.998822517 0.000100409 CG7110 FBtr0080500|FBtr0345438 13410635|13410635 13411047|13410955 2L + 13410765 13410857 3'utr CG7110 FlyBase G4481.1 ATTTTGTAAACAACTCATGTAGTTATAACTTTATAGTGAGCTGGTTCCAAGTGCTTCGGCTGTTTCATTCAGCGACTCTAATACATAAGGCAT 19 13410820 0.748782427 12 17 137 0.923076923 1.380211242 0.153846154 0.210526316 0.423076923 19 2 0 24 2L:13410765-13410857 6 CG7110 FBtr0080500|FBtr0345438 13410635|13410635 13411047|13410955 TGAGCT 6mer3-8 dme-miR-1007-3p 2L + 13410767 13410827 3'utr CG7110 FlyBase G3479.1 TTTGTAAACAACTCATGTAGTTATAACTTTATAGTGAGCTGGTTCCAAGTGCTTCGGCTGT 14 13410784 0.776642792 6 13 105 1 1.322219295 0.19047619 0.285714286 0.523809524 14 0 0 21 2L:13410767-13410827 6 9 122 FBgn0032521 924.9866667 37.5 57.29 0.00972987 0.24 0.157095479 -19 17 -1 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2L 13502806 13502812 - 2L_13502806_13502812_- 0.661213004 0.659955772 0.660584388 0.000888975 B4 FBtr0332509|FBtr0080514|FBtr0080513 13500622|13502654|13502654 13504503|13504503|13504503 2L - 13502752 13502841 3'utr B4 FlyBase G10603.1 AAGTAGAGTTTAGACACTAAGGTCCAGTTTCTAGTCTTAATTTGAAAACAAATATGAAGCCGTTTCGAAATGGAGACATGCCAAACTTTT 61 13502813 0.952635164 6 58 479 0.974025974 1.875061263 0.077922078 0.229508197 0.38961039 61 2 0 75 2L:13502752-13502841 7 B4 FBtr0080513|FBtr0332509|FBtr0080514 13502654|13500622|13502654 13504503|13504503|13504503 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2L - 13502793 13502840 3'utr B4 FlyBase G8172.1 AGTAGAGTTTAGACACTAAGGTCCAGTTTCTAGTCTTAATTTGAAAAC 45 13502813 0.73558114 2 44 376 0.983606557 1.77815125 0.06557377 0.333333333 0.508196721 45 1 0 60 2L:13502793-13502840 7 48 123 FBgn0023407 923.55 17.94 27.61666667 0.051973364 2.675585284 1.738080869 1 1 1 0.2 dme-bantam-3p 6mer2-7 GATCTC 2L 13503093 13503098 - 2L_13503093_13503098_- 0.999546575 0.999983149 0.999764862 0.000308652 B4 FBtr0332509|FBtr0080514|FBtr0080513 13500622|13502654|13502654 13504503|13504503|13504503 2L - 13503075 13503154 3'utr B4 FlyBase G10605.1 ATTGTATATTTGTAAAATAGCATAAACTTTTAGGGCAAAATGCCAAACTTTTACACGATCTCTCGTATTTTGTCGTTCTT 40 13503103 0.791648182 11 36 336 0.96 1.681241237 0.02 0.175 0.34 40 2 0 48 2L:13503075-13503154 6 B4 FBtr0080513|FBtr0332509|FBtr0080514 13502654|13500622|13502654 13504503|13504503|13504503 GATCTC 6mer2-7 dme-bantam-3p 2L - 13503074 13503137 3'utr B4 FlyBase G8173.1 TAGCATAAACTTTTAGGGCAAAATGCCAAACTTTTACACGATCTCTCGTATTTTGTCGTTCTTT 30 13503104 0.681875235 10 28 262 0.866666667 1.591064607 0 0.333333333 0.555555556 30 6 0 39 2L:13503074-13503137 6 29 124 FBgn0023407 923.55 17.94 27.61666667 0.031400574 1.616499443 1.050090525 5 6 5.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2L 13636744 13636750 + 2L_13636744_13636750_+ 0.748174687 0.823071723 0.785623205 0.052960177 kuz FBtr0080509|FBtr0080510|FBtr0342903 13636648|13636648|13636247 13638238|13639411|13636995 2L + 13636728 13636757 3'utr kuz FlyBase G4505.1 ATAGAATCGCCCGCTGCTAGTCATCGAACT 12 13636742 0.860059869 2 12 49 1 1.079181246 0.166666667 0 0 12 0 0 12 2L:13636728-13636757 7 kuz FBtr0342903|FBtr0080509|FBtr0080510 13636247|13636648|13636648 13636995|13638238|13639411 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L + 13636720 13636757 3'utr kuz FlyBase G3496.1 AACCACATATAGAATCGCCCGCTGCTAGTCATCGAACT 6 13636742 0.945611426 3 6 27 1 0.84509804 0.428571429 0.166666667 0.285714286 6 0 0 7 2L:13636720-13636757 7 9 125 FBgn0259984 6208.386667 134.8066667 206.8566667 0.001449652 0.066762277 0.043508387 2 2 2 0.2 dme-miR-79-3p 7mer-A1 AGCTTTA 2L 13637314 13637320 + 2L_13637314_13637320_+ 0.787344122 0.823347925 0.805346023 0.025458531 kuz FBtr0080509|FBtr0080510 13636648|13636648 13638238|13639411 2L + 13637289 13637339 stop_codon kuz FlyBase G4507.1 CGTCGCGCCGCCTCCGCTACAAGTAAGCTTTAGTCGGCCGACATCGTTGCA 10 13637312 0.961517742 2 9 58 0.833333333 1 0.416666667 0.2 0.333333333 10 2 0 10 2L:13637289-13637339 7 kuz FBtr0080509|FBtr0080510 13636648|13636648 13638238|13639411 AGCTTTA 7mer-A1 dme-miR-79-3p 2L + 13637298 13637331 stop_codon kuz FlyBase G3497.1 GCCTCCGCTACAAGTAAGCTTTAGTCGGCCGACA 5 13637321 0.894000975 3 5 26 1 0.903089987 0.125 0.2 0.5 5 0 0 8 2L:13637298-13637331 7 7.5 126 FBgn0259984 6208.386667 134.8066667 206.8566667 0.001208043 0.055635231 0.03625699 2 -7 -2.5 0.2 dme-miR-283-5p 8mer-m1 TGATATTT 2L 13637779 13637786 + 2L_13637779_13637786_+ 0.534498277 0.520858483 0.52767838 0.009644795 kuz FBtr0100660|FBtr0080509|FBtr0080510|FBtr0301412 13637320|13636648|13636648|13637495 13639411|13638238|13639411|13638238 2L + 13637747 13637786 3'utr kuz FlyBase G4509.1 AATTTCGTAATACAGAAAAAGCTGAAAGTGAATGATATTT 9 13637778 0.873734376 4 9 38 1 1.113943352 0.153846154 0.333333333 0.538461538 9 0 0 13 2L:13637747-13637786 8 kuz FBtr0301412|FBtr0080509|FBtr0080510|FBtr0100660 13637495|13636648|13636648|13637320 13638238|13638238|13639411|13639411 TGATATTT 8mer-m1 dme-miR-283-5p 2L + 13637755 13637786 3'utr kuz FlyBase G3500.1 AATACAGAAAAAGCTGAAAGTGAATGATATTT 5 13637779 0.915451934 2 5 19 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2L:13637755-13637786 8 6.5 127 FBgn0259984 6208.386667 134.8066667 206.8566667 0.001046971 0.0482172 0.031422724 1 0 0.5 0.2 dme-miR-968-5p 6mer3-8 ACTACT 2L 13638795 13638800 + 2L_13638795_13638800_+ 0.96826397 0.944171257 0.956217614 0.017036112 kuz FBtr0100660|FBtr0080510 13637320|13636648 13639411|13639411 2L + 13638724 13638808 3'utr kuz FlyBase G4511.3 TTTTGTCTGTGTTTCGTATTTGCATGCTCAAGAACTAATCGTGCAACTACTCACGGAGTCCCGACTGATGTACTACTCCAAGAAA 107 13638796 0.933798296 10 101 525 0.960629921 2.086359831 0.322834646 0.177570093 0.307086614 107 5 0 122 2L:13638724-13638808 6 kuz FBtr0080510|FBtr0100660 13636648|13637320 13639411|13639411 ACTACT 6mer3-8 dme-miR-968-5p 2L + 13638769 13638808 3'utr kuz FlyBase G3504.1 ACTACTCACGGAGTCCCGACTGATGTACTACTCCAAGAAA 64 13638796 0.703937022 4 62 307 0.990291262 1.707570176 0.40776699 0.40625 0.631067961 64 0 1 102 2L:13638769-13638808 6 73.5 128 FBgn0259984 6208.386667 134.8066667 206.8566667 0.011838824 0.545225261 0.355318498 -1 -1 -1 0.2 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 13782423 13782429 - 2L_13782423_13782429_- 0.808021185 0.801533897 0.804777541 0.004587214 CG16890 FBtr0343661|FBtr0329825 13782229|13782229 13782609|13782609 2L - 13782411 13782462 3'utr CG16890 FlyBase G10642.1 GACACCAAATCTAAAGTTGAACTGGACATTAAGGCTGTGACTCTGATTGATT 21 13782440 0.743182755 7 20 134 0.966666667 1.462397998 0.233333333 0.333333333 0.533333333 21 1 0 29 2L:13782411-13782462 7 CG16890 FBtr0329825|FBtr0343661 13782229|13782229 13782609|13782609 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L - 13782414 13782448 3'utr CG16890 FlyBase G8199.1 AGTTGAACTGGACATTAAGGCTGTGACTCTGATTG 9 13782433 0.73314951 3 9 56 1 1.041392685 0.272727273 0.222222222 0.363636364 9 0 0 11 2L:13782414-13782448 7 14 129 FBgn0028932 129.2066667 16.03333333 24.55666667 0.108353542 0.873180873 0.57010995 11 4 7.5 0.2 dme-miR-980-3p 6mer3-8 GGCAGC 2L 1380777 1380782 - 2L_1380777_1380782_- 0.998036048 0.996152325 0.997094187 0.001331977 lea FBtr0329985|FBtr0077941 1380084|1380084 1381443|1381611 2L - 1380723 1380813 3'utr lea FlyBase G6798.1 TAGTGTATACACCCACTTAGATAGATCGATGGGCAGCATTTTGTTTGTTACTTAAGGGGTTCGTAATTAGTCTAAGCGTCCAGGCAGATAT 31 1380774 0.704633136 12 30 190 0.972972973 1.556302501 0.135135135 0.161290323 0.297297297 31 1 0 36 2L:1380723-1380813 6 lea FBtr0329985|FBtr0077941 1380084|1380084 1381443|1381611 GGCAGC 6mer3-8 dme-miR-980-3p 2L - 1380700 1380814 3'utr lea FlyBase G5313.1 ATAGTGTATACACCCACTTAGATAGATCGATGGGCAGCATTTTGTTTGTTACTTAAGGGGTTCGTAATTAGTCTAAGCGTCCAGGCAGATATCAATTCAGTAGCCACGAATGTTT 27 1380773 0.981193301 11 26 191 0.974358974 1.579783597 0.076923077 0.37037037 0.564102564 27 1 0 38 2L:1380700-1380814 6 19 130 FBgn0002543 15.93666667 0.32 0.503333333 1.192219201 59.375 37.74834437 -8 -9 -8.5 0.2 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 1380829 1380836 - 2L_1380829_1380836_- 0.487660638 0.394138156 0.440899397 0.066130323 lea FBtr0329985|FBtr0077941 1380084|1380084 1381443|1381611 2L - 1380816 1380880 3'utr lea FlyBase G6799.1 AAGTTCCTCCAAGTATGCAGACGATGATAGCCAAAACGCTGCGTTAGCTTTAGAGTATACACATA 37 1380837 0.790261873 9 37 221 1 1.633468456 0.023255814 0.162162162 0.279069767 37 0 0 43 2L:1380816-1380880 8 lea FBtr0329985|FBtr0077941 1380084|1380084 1381443|1381611 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 1380817 1380877 3'utr lea FlyBase G5314.1 TTCCTCCAAGTATGCAGACGATGATAGCCAAAACGCTGCGTTAGCTTTAGAGTATACACAT 26 1380837 0.801575355 5 24 140 0.930232558 1.301029996 0.069767442 0.461538462 0.674418605 26 2 1 40 2L:1380817-1380877 8 23 131 FBgn0002543 15.93666667 0.32 0.503333333 1.443212717 71.875 45.69536424 1 1 1 0.2 dme-miR-14-3p 7mer-A1 AGACTGA 2L 1381143 1381149 - 2L_1381143_1381149_- 0.488720958 0.494029216 0.491375087 0.003753464 lea FBtr0329985|FBtr0077941 1380084|1380084 1381443|1381611 2L - 1381116 1381179 3'utr lea FlyBase G6800.2 TGTCACAAATGAGAAATGTGACCAAGACTGAGACTGACAGAGTGCGAGATTCGTGTGAGGATTA 1386 1381151 0.978131239 10 1347 4095 0.975609756 2.369745808 0.387269482 0.164502165 0.311124331 1386 35 6 1640 2L:1381116-1381179 7 lea FBtr0329985|FBtr0077941 1380084|1380084 1381443|1381611 AGACTGA 7mer-A1 dme-miR-14-3p 2L - 1381119 1381176 3'utr lea FlyBase G5316.1 CACAAATGAGAAATGTGACCAAGACTGAGACTGACAGAGTGCGAGATTCGTGTGAGGA 979 1381151 0.967139608 8 943 2772 0.97146402 2.495821753 0.377171216 0.433094995 0.655707196 979 42 4 1566 2L:1381119-1381176 7 1170.5 132 FBgn0002543 15.93666667 0.32 0.503333333 73.44697762 3657.8125 2325.496689 2 2 2 0.2 dme-miR-184-5p 8mer-m1 TGATAAGG 2L 13819398 13819405 + 2L_13819398_13819405_+ 0.54575689 0.528231355 0.536994122 0.0123924 Sos FBtr0080541 13819377 13819824 2L + 13819333 13819416 lincRNA_intron-lincRNA_exon Sos FlyBase G4579.1 AGATAAAGGTACGATGTTTCTTTACCCAAGTACAAACGAAGAATAATTTAAATTGCCTGGCGATGTGATAAGGACGAAAACTAC 33 13819387 0.974682324 9 29 191 0.868421053 1.041392685 0.368421053 0.151515152 0.263157895 33 3 2 33 2L:13819333-13819416 8 Sos FBtr0080541 13819377 13819824 TGATAAGG 8mer-m1 dme-miR-184-5p 2L + 13819377 13819409 stop_codon Sos FlyBase G3558.1 AATTTAAATTGCCTGGCGATGTGATAAGGACGA 10 13819388 0.701574928 6 9 49 0.75 1.079181246 0.5625 0.3 0.5625 10 4 0 12 2L:13819377-13819409 8 15 133 FBgn0001965 887.1 19.05333333 29.30333333 0.016909029 0.787263821 0.511887157 11 10 10.5 0.2 dme-miR-282-5p 6mer2-7 GAGGCT 2L 13824070 13824075 - 2L_13824070_13824075_- 0.992518642 0.997544031 0.995031337 0.003553494 tam FBtr0080571 13823978 13824139 2L - 13824042 13824098 3'utr tam FlyBase G10648.1 ACTCAGGAAGTCAAGGAGACTTGGAGGCTGTTACTAGTTCCTCTTAAATTGTAAGGC 28 13824077 0.814754382 7 26 155 0.96875 1.491361694 0.125 0.107142857 0.21875 28 1 0 31 2L:13824042-13824098 6 tam FBtr0080571 13823978 13824139 GAGGCT 6mer2-7 dme-miR-282-5p 2L - 13824042 13824098 3'utr tam FlyBase G8204.1 ACTCAGGAAGTCAAGGAGACTTGGAGGCTGTTACTAGTTCCTCTTAAATTGTAAGGC 19 13824077 0.920677179 7 18 92 1 1.51851394 0.212121212 0.578947368 0.757575758 19 0 0 33 2L:13824042-13824098 6 21 134 FBgn0004406 477.07 15.66333333 23.98666667 0.044018697 1.34071079 0.875486381 2 2 2 0.2 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 13831862 13831868 - 2L_13831862_13831868_- 0.442899612 0.451236621 0.447068117 0.005895149 CG33649 FBtr0091626 13831480 13832624 2L - 13831830 13831884 intron-3'utr CG33649 FlyBase G10670.1 GCTCTGCTTCTGGATGGCTGTGATCATGGCCGGGACTCGCAATCCCTGCTCTTAC 45 13831858 0.841147265 5 44 281 0.981132075 1.716003344 0.698113208 0.155555556 0.283018868 45 1 0 52 2L:13831830-13831884 7 CG33649 FBtr0091626 13831480 13832624 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L - 13831831 13831882 3'utr CG33649 FlyBase G8220.1 TCTGCTTCTGGATGGCTGTGATCATGGCCGGGACTCGCAATCCCTGCTCTTA 34 13831858 0.859863205 4 32 205 0.929824561 1.72427587 0.561403509 0.529411765 0.719298246 34 4 0 53 2L:13831831-13831882 7 38.5 135 FBgn0064115 259.7433333 20.19 30.89333333 0.148223246 1.906884596 1.246223565 -10 -10 -10 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 13831960 13831967 - 2L_13831960_13831967_- 0.645444196 0.642744054 0.644094125 0.001909259 CG33649 FBtr0091626|FBtr0091626|FBtr0091626 13831480|13831480|13831480 13832624|13832624|13832624 2L - 13831945 13831991 5'utr CG33649 FlyBase G10671.1 TTGTGCAACCGACTGTCATAAGGTCTGTGATAGAGCTGGAAACTACC 41 13831968 0.738875031 8 35 257 0.85106383 1.124938737 0.468085106 0.146341463 0.255319149 41 5 2 40 2L:13831945-13831991 8 CG33649 FBtr0091626|FBtr0091626|FBtr0091626 13831480|13831480|13831480 13832624|13832624|13832624 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 13831947 13831982 5'utr CG33649 FlyBase G8221.1 CGACTGTCATAAGGTCTGTGATAGAGCTGGAAACTA 17 13831968 0.751527328 3 14 105 0.90625 1.161368002 0.09375 0.411764706 0.6875 17 2 1 29 2L:13831947-13831982 8 27.5 136 FBgn0064115 259.7433333 20.19 30.89333333 0.105873747 1.362060426 0.890159689 1 1 1 0.2 dme-bantam-3p 6mer3-8 TGATCT 2L 13899145 13899150 - 2L_13899145_13899150_- 0.975725049 0.893688788 0.934706918 0.058008353 Smg5 FBtr0080562 13898826 13899821 2L - 13899133 13899216 3'utr Smg5 FlyBase G10677.1 TGTACCATGTCGTATTCAAGATTTCGCATTTCCTGTGTCGGGCTGGACTATGGATCCAAAAACTCTTGATCTTTCCTGCAGTTG 20 13899150 0.787885031 11 20 153 1 1.342422681 0.136363636 0.1 0.181818182 20 0 0 22 2L:13899133-13899216 6 Smg5 FBtr0080562 13898826 13899821 TGATCT 6mer3-8 dme-bantam-3p 2L - 13899133 13899181 3'utr Smg5 FlyBase G8227.1 TGTCGGGCTGGACTATGGATCCAAAAACTCTTGATCTTTCCTGCAGTTG 9 13899150 0.979768736 4 9 61 1 1.079181246 0.083333333 0.222222222 0.416666667 9 0 0 12 2L:13899133-13899181 6 11 137 FBgn0019890 1083.97 27.57666667 42.05333333 0.010147882 0.398887949 0.261572606 0 0 0 0.2 dme-miR-1008-3p 6mer2-7 GCTGTG 2L 14048793 14048798 + 2L_14048793_14048798_+ 0.99797312 0.991950401 0.99496176 0.004258692 NimC4 FBtr0080592 14048763 14048863 2L + 14048771 14048818 3'utr NimC4 FlyBase G4599.1 CAGGTTCATCCCTTGGCGTTGGGCTGTGTTATATCAACATTGATTGTT 44 14048799 0.978310372 8 43 408 0.957446809 1.653212514 0 0.068181818 0.127659574 44 2 0 45 2L:14048771-14048818 6 NimC4 FBtr0080592 14048763 14048863 GCTGTG 6mer2-7 dme-miR-1008-3p 2L + 14048772 14048816 3'utr NimC4 FlyBase G3570.1 AGGTTCATCCCTTGGCGTTGGGCTGTGTTATATCAACATTGATTG 32 14048799 0.899308396 8 31 294 0.980769231 1.707570176 0.019230769 0.5 0.692307692 32 1 0 51 2L:14048772-14048816 6 37.5 138 FBgn0260011 2 0.196666667 0.31 18.75 190.6779661 120.9677419 -6 -6 -6 0.2 dme-miR-14-3p 6mer2-7 AGACTG 2L 14184939 14184944 - 2L_14184939_14184944_- 0.988056223 0.99975027 0.993903246 0.008268977 Dyrk2 FBtr0089290|FBtr0089289|FBtr0329933|FBtr0100448|FBtr0100447 14184476|14184476|14184476|14184476|14184476 14186137|14186137|14186065|14186137|14186137 2L - 14184927 14185000 3'utr Dyrk2 FlyBase G10700.1 AAGACGGCAGACAGTTTGATATGAACTTGAGCTGGGTAAGATTGCTTACCAAATCCAGACTGTAATTTGAACGA 9 14184947 0.97246596 6 9 57 1 1.041392685 0.545454545 0.222222222 0.363636364 9 0 0 11 2L:14184927-14185000 6 Dyrk2 FBtr0100447|FBtr0100448|FBtr0329933|FBtr0089289|FBtr0089290 14184476|14184476|14184476|14184476|14184476 14186137|14186137|14186065|14186137|14186137 AGACTG 6mer2-7 dme-miR-14-3p 2L - 14184910 14184968 3'utr Dyrk2 FlyBase G8244.1 TGGGTAAGATTGCTTACCAAATCCAGACTGTAATTTGAACGAAGTTTGTAACCTGTAAT 13 14184935 0.906287318 7 12 84 0.888888889 1.204119983 0.277777778 0.307692308 0.5 13 2 0 16 2L:14184910-14184968 6 7.5 139 FBgn0016930 948.1733333 27.29666667 41.49333333 0.007909946 0.274758823 0.180751928 3 -9 -3 0.2 dme-miR-33-5p 8mer-A1 CAATGCAA 2L 14185290 14185297 - 2L_14185290_14185297_- 0.485744489 0.479106331 0.48242541 0.004693916 Dyrk2 FBtr0089288|FBtr0089290|FBtr0089289|FBtr0329933|FBtr0100448|FBtr0100447 14185024|14184476|14184476|14184476|14184476|14184476 14186137|14186137|14186137|14186065|14186137|14186137 2L - 14185195 14185325 3'utr Dyrk2 FlyBase G10702.1 ACTACAGGAAATCAACTCTGTAGCCTGCCAATGCAAGATAAATTTGAATTCCGCTTGGATACATATACTTGATCCCATTAAACCAATCCATACGGAATACATGTCATAATTTAATGAAAACACATATTTAA 63 14185294 0.977292234 16 61 387 0.972222222 1.544068044 0.097222222 0.142857143 0.25 63 1 1 70 2L:14185195-14185325 8 Dyrk2 FBtr0100447|FBtr0100448|FBtr0329933|FBtr0089289|FBtr0089290|FBtr0089288 14184476|14184476|14184476|14184476|14184476|14185024 14186137|14186137|14186065|14186137|14186137|14186137 CAATGCAA 8mer-A1 dme-miR-33-5p 2L - 14185280 14185316 3'utr Dyrk2 FlyBase G8246.2 AATCAACTCTGTAGCCTGCCAATGCAAGATAAATTTG 33 14185294 0.951264222 4 32 165 1 1.763427994 0.362068966 0.515151515 0.724137931 33 0 0 58 2L:14185280-14185316 8 39 140 FBgn0016930 948.1733333 27.29666667 41.49333333 0.04113172 1.428745879 0.939910026 -3 -3 -3 0.2 dme-miR-7-5p 6mer2-7 TCTTCC 2L 14185712 14185717 - 2L_14185712_14185717_- 0.964011302 0.963085796 0.963548549 0.000654427 Dyrk2 FBtr0089288|FBtr0089290|FBtr0089289|FBtr0329933|FBtr0100448|FBtr0336949|FBtr0100447 14185024|14184476|14184476|14184476|14184476|14185660|14184476 14186137|14186137|14186137|14186065|14186137|14186137|14186137 2L - 14185664 14185790 3'utr Dyrk2 FlyBase G10704.1 TATTTCGCTACTGCCATAGCTAAAGGTATTCAAAATCGTATTCACACCCACAAACCCTTCCTGAAAAGTATTCTCTTCCCTCCAACTCCCTCCATCCTTTTACACTGTATTCAAAATGAACAAACCA 467 14185715 0.984860647 17 458 3806 0.979890311 2.428134794 0.142595978 0.139186296 0.265082267 467 10 1 536 2L:14185664-14185790 6 Dyrk2 FBtr0100447|FBtr0336949|FBtr0100448|FBtr0329933|FBtr0089289|FBtr0089290|FBtr0089288 14184476|14185660|14184476|14184476|14184476|14184476|14185024 14186137|14186137|14186137|14186065|14186137|14186137|14186137 TCTTCC 6mer2-7 dme-miR-7-5p 2L - 14185688 14185739 3'utr Dyrk2 FlyBase G8249.1 AAACCCTTCCTGAAAAGTATTCTCTTCCCTCCAACTCCCTCCATCCTTTTAC 223 14185715 0.74952948 6 215 1746 0.968847352 1.714609139 0.130841121 0.349775785 0.548286604 223 5 5 311 2L:14185688-14185739 6 335.5 141 FBgn0016930 948.1733333 27.29666667 41.49333333 0.353838257 12.29087801 8.085636247 -2 -2 -2 0.2 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 14325959 14325966 + 2L_14325959_14325966_+ 0.603804178 0.623713904 0.613759041 0.014078284 wb FBtr0305063 14325709 14326280 2L + 14325937 14326000 3'utr wb FlyBase G4600.1 CACTCTCATGGGCAGACTGATTTAGCTTTAAGCTAGCGCATCTTGATCCTCAGATAACCGAAAC 27 14325980 0.755398847 5 26 185 0.967741935 1.477121255 0.161290323 0.148148148 0.258064516 27 1 0 30 2L:14325937-14326000 8 wb FBtr0305063 14325709 14326280 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L + 14325935 14325996 3'utr wb FlyBase G3572.1 TTCACTCTCATGGGCAGACTGATTTAGCTTTAAGCTAGCGCATCTTGATCCTCAGATAACCG 18 14325957 0.752506779 4 18 130 1 1.568201724 0.108108108 0.611111111 0.810810811 18 0 0 37 2L:14325935-14325996 8 15.5 142 FBgn0261563 1083 12.21333333 18.64 0.014312096 1.269104803 0.831545064 -21 2 -9.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2L 14327834 14327839 + 2L_14327834_14327839_+ 0.997565712 0.99498292 0.996274316 0.001826315 wb FBtr0302732|FBtr0302732|FBtr0302732|FBtr0302734|FBtr0302734|FBtr0302734|FBtr0302731|FBtr0302731|FBtr0302731|FBtr0302733|FBtr0302733|FBtr0302733|FBtr0302735|FBtr0302735|FBtr0302735 14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750 14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262 2L + 14327814 14327918 3'utr wb FlyBase G4602.2 AAAACTTTTTCCAAATGTATTGTGATCAATAACGAGTTTAGAGCCACCTATTTATAGCCCTTCACTGCCATATAAGTTAGGTTACTGTAGGATTAGCTTTGAATG 113 14327833 0.861015229 16 103 969 0.916030534 1.602059991 0.083969466 0.123893805 0.244274809 113 9 2 120 2L:14327814-14327918 6 wb FBtr0302731|FBtr0302731|FBtr0302731|FBtr0302732|FBtr0302732|FBtr0302732|FBtr0302734|FBtr0302734|FBtr0302734|FBtr0302733|FBtr0302733|FBtr0302733|FBtr0302735|FBtr0302735|FBtr0302735 14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750 14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 14327782 14327860 3'utr wb FlyBase G3573.1 CGGGCGCATCTGGTTCCTGTTGACGCCACACCAAAACTTTTTCCAAATGTATTGTGATCAATAACGAGTTTAGAGCCAC 45 14327833 0.991308004 8 34 361 0.768115942 0.87917783 0 0.4 0.608695652 45 10 6 53 2L:14327782-14327860 6 49 143 FBgn0261563 1083 12.21333333 18.64 0.045244691 4.012008734 2.628755365 1 1 1 0.2 dme-miR-282-5p 6mer2-7 GAGGCT 2L 14345435 14345440 + 2L_14345435_14345440_+ 0.990483948 0.994634512 0.99255923 0.002934917 CG33090 FBtr0343673|FBtr0343675|FBtr0080624|FBtr0343674 14345339|14345339|14345339|14345339 14345795|14345795|14345790|14345790 2L + 14345416 14345485 3'utr CG33090 FlyBase G4608.1 TTAGTTCGATTCTTCTTTTGAGGCTGAATGTGTAACGAGCTTATCGAGATGGTGCGAGTCGAGGAAGATG 33 14345434 0.911428974 3 33 274 1 1.591064607 0.512820513 0.181818182 0.307692308 33 0 0 39 2L:14345416-14345485 6 CG33090 FBtr0343674|FBtr0080624|FBtr0343675|FBtr0343673 14345339|14345339|14345339|14345339 14345790|14345790|14345795|14345795 GAGGCT 6mer2-7 dme-miR-282-5p 2L + 14345394 14345483 3'utr CG33090 FlyBase G3578.1 AGCACAAAGATTTTCTTAGCGTTTAGTTCGATTCTTCTTTTGAGGCTGAATGTGTAACGAGCTTATCGAGATGGTGCGAGTCGAGGAAGA 40 14345434 0.987651497 8 38 336 0.984375 1.498310554 0.59375 0.375 0.609375 40 0 1 63 2L:14345394-14345483 6 27.5 144 FBgn0028916 435.3333333 15.55666667 24.00333333 0.063169985 1.767730876 1.145674212 1 1 1 0.2 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2L 14345611 14345616 + 2L_14345611_14345616_+ 0.674720653 0.582004912 0.628362783 0.065559971 CG33090 FBtr0343673|FBtr0343675|FBtr0080624|FBtr0343674 14345339|14345339|14345339|14345339 14345795|14345795|14345790|14345790 2L + 14345575 14345676 3'utr CG33090 FlyBase G4610.1 TTTAAAGCCAGTCACAAATCAAACTGCTACTCTCTGTTGAAGTACAACTACGCAATGGTATTCAAATGGAGCACAAGTCGTATTTAGATGTTAGCTAAGAGA 18 14345612 0.973984384 10 18 113 1 1.342422681 0.272727273 0.166666667 0.318181818 18 0 0 22 2L:14345575-14345676 6 CG33090 FBtr0343674|FBtr0080624|FBtr0343675|FBtr0343673 14345339|14345339|14345339|14345339 14345790|14345790|14345795|14345795 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2L + 14345562 14345626 3'utr CG33090 FlyBase G3580.1 TGTCTTCTCTAGCTTTAAAGCCAGTCACAAATCAAACTGCTACTCTCTGTTGAAGTACAACTACG 6 14345612 0.983750357 4 4 32 0.8 0.903089987 0.5 0.333333333 0.6 6 2 0 8 2L:14345562-14345626 6 6 145 FBgn0028916 435.3333333 15.55666667 24.00333333 0.013782542 0.385686737 0.249965283 -1 -1 -1 0.2 dme-miR-988-3p 6mer3-8 ACAAGG 2L 14365390 14365395 + 2L_14365390_14365395_+ 0.998942554 0.999999993 0.999471273 0.000747695 spel1 FBtr0309281|FBtr0080630 14365229|14365229 14366840|14365568 2L + 14365340 14365416 5'utr spel1 FlyBase G4638.1 ACTGAATATTGCTCATCCATGGTTACAAACCATATTCTCCTGATTTGATTACAAGGCTACATCGAAAATGTTGTTTA 22 14365374 0.83156888 9 20 174 0.92 1.361727836 0.28 0.136363636 0.24 22 2 0 23 2L:14365340-14365416 6 spel1 FBtr0080630|FBtr0309281 14365229|14365229 14365568|14366840 ACAAGG 6mer3-8 dme-miR-988-3p 2L + 14365340 14365401 5'utr spel1 FlyBase G3596.1 ACTGAATATTGCTCATCCATGGTTACAAACCATATTCTCCTGATTTGATTACAAGGCTACAT 11 14365374 0.979894701 6 10 78 1 1.301029996 0.1 0.636363636 0.8 11 0 0 20 2L:14365340-14365401 6 4 146 FBgn0015546 654.7233333 24.05333333 36.85 0.006109451 0.166297118 0.108548168 16 16 16 0.2 dme-miR-317-3p 8mer-A1 TGTGTTCA 2L 15011511 15011518 + 2L_15011511_15011518_+ 0.630031677 0.630416861 0.630224269 0.000272378 l(2)35Bd FBtr0080696 15011357 15011764 2L + 15011502 15011532 3'utr l(2)35Bd FlyBase G4656.1 ATGTTTGTTTGTGTTCATAGGTTTCAATTCA 45 15011510 0.73910665 3 45 557 1 1.698970004 0.08 0.111111111 0.2 45 0 0 50 2L:15011502-15011532 8 l(2)35Bd FBtr0080696 15011357 15011764 TGTGTTCA 8mer-A1 dme-miR-317-3p 2L + 15011500 15011531 3'utr l(2)35Bd FlyBase G3606.1 GTATGTTTGTTTGTGTTCATAGGTTTCAATTC 31 15011510 0.725946935 4 31 379 1 1.72427587 0.037735849 0.483870968 0.698113208 31 0 0 53 2L:15011500-15011531 8 38 147 FBgn0001974 148.6633333 10.34 15.90666667 0.255611112 3.675048356 2.388935457 1 1 1 0.2 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 15045019 15045024 - 2L_15045019_15045024_- 0.825152018 0.876505854 0.850828936 0.036312691 ck FBtr0080724|FBtr0080723|FBtr0343687 15044961|15044961|15044961 15045413|15045413|15045413 2L - 15045016 15045043 3'utr ck FlyBase G10744.1 CCTAACTGCATATCTGTACTGATGACGT 8 15045021 0.925497486 2 8 51 1 1.041392685 0 0.375 0.545454545 8 0 0 11 2L:15045016-15045043 6 ck FBtr0080723|FBtr0343687|FBtr0080724 15044961|15044961|15044961 15045413|15045413|15045413 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L - 15044973 15045040 3'utr ck FlyBase G8282.1 AACTGCATATCTGTACTGATGACGTTTTGTATCAAATACATAGAAATGTTCAATTATTTAATAAATTA 7 15045022 0.980708503 5 7 59 1 0.84509804 0 0 0 7 0 0 7 2L:15044973-15045040 6 6 148 FBgn0000317 907.6633333 14.81666667 22.80666667 0.006610381 0.404949381 0.26308097 -3 -2 -2.5 0.2 dme-miR-1002-5p 6mer3-8 CTACTT 2L 15063436 15063441 - 2L_15063436_15063441_- 0.870765308 0.809796747 0.840281027 0.04311131 vig FBtr0080718|FBtr0080721 15062929|15062929 15064433|15064433 2L - 15063406 15063456 3'utr vig FlyBase G10759.1 TATGCATCATATATACTACTTTTAATTATAAATACCTAACTGAACTTACAC 9 15063443 0.994900684 4 8 108 0.9 0.954242509 0.2 0.111111111 0.2 9 1 0 9 2L:15063406-15063456 6 vig FBtr0080721|FBtr0080718 15062929|15062929 15064433|15064433 CTACTT 6mer3-8 dme-miR-1002-5p 2L - 15063407 15063460 3'utr vig FlyBase G8289.1 GGACTATGCATCATATATACTACTTTTAATTATAAATACCTAACTGAACTTACA 7 15063445 0.815062517 5 6 51 0.888888889 0.903089987 0.555555556 0.142857143 0.333333333 7 1 0 8 2L:15063407-15063460 6 6 149 FBgn0024183 3911.293333 182.2033333 280.32 0.001534019 0.032930243 0.02140411 2 4 3 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2L 15064064 15064070 - 2L_15064064_15064070_- 0.82333987 0.82325197 0.82329592 6.22E-05 vig FBtr0080718|FBtr0080721 15062929|15062929 15064433|15064433 2L - 15064044 15064091 3'utr vig FlyBase G10763.1 AAGCAAGTGACCTCGTGTAAACTAGTCAGTGTCAGGCTAAGTTATCCT 10 15064069 0.795443369 5 10 62 1 1.079181246 0 0.2 0.333333333 10 0 0 12 2L:15064044-15064091 7 vig FBtr0080721|FBtr0080718 15062929|15062929 15064433|15064433 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 15064049 15064099 3'utr vig FlyBase G8290.1 TCGCGATCAAGCAAGTGACCTCGTGTAAACTAGTCAGTGTCAGGCTAAGTT 9 15064062 0.930467197 4 7 54 0.846153846 1.041392685 0.307692308 0.222222222 0.461538462 9 2 0 11 2L:15064049-15064099 7 8.5 150 FBgn0024183 3911.293333 182.2033333 280.32 0.002173194 0.046651177 0.030322489 -1 -8 -4.5 0.2 dme-miR-1012-3p 7mer-A1 TGACTAA 2L 15504068 15504074 + 2L_15504068_15504074_+ 0.822578243 0.823349539 0.822963891 0.000545391 lace FBtr0343735|FBtr0080738 15503914|15503914 15504591|15505018 2L + 15503931 15504149 3'utr lace FlyBase G4694.1 CATAGAAGTTAAGCTTGGGGAAATGGTAACCTCCCCGATTGGTAAACCAAAACTACAACACAGTCCAGATAGTGCTAAATCAATCACGAACGGTGGCTTACATTGACCAAGTTTCAGTTGCACTGGGCTTCTATTTATGACTAATTCTCTGGTTATATGCCTTAAAAGGGAAGATCACTACAGCAACAGAAACAAAACACTACAGCACATAGCTTAAAT 64 15504080 0.98263667 26 61 453 0.961038961 1.568201724 0.155844156 0.171875 0.311688312 64 2 1 74 2L:15503931-15504149 7 lace FBtr0343735|FBtr0080738 15503914|15503914 15504591|15505018 TGACTAA 7mer-A1 dme-miR-1012-3p 2L + 15503926 15504103 3'utr lace FlyBase G3637.1 ACACACATAGAAGTTAAGCTTGGGGAAATGGTAACCTCCCCGATTGGTAAACCAAAACTACAACACAGTCCAGATAGTGCTAAATCAATCACGAACGGTGGCTTACATTGACCAAGTTTCAGTTGCACTGGGCTTCTATTTATGACTAATTCTCTGGTTATATGCCTTAAAAGGGAAG 33 15504046 0.853527746 24 33 196 1 1.672097858 0.14893617 0.363636364 0.553191489 33 0 0 47 2L:15503926-15504103 7 12 151 FBgn0002524 4527.636667 202.88 309.75 0.002650389 0.059148265 0.03874092 -12 22 5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 15646806 15646811 - 2L_15646806_15646811_- 0.741404301 0.66641116 0.70390773 0.05302813 CG4587 FBtr0344778|FBtr0344778|FBtr0344778|FBtr0344775|FBtr0344775|FBtr0344775|FBtr0344773|FBtr0344773|FBtr0344773|FBtr0344774|FBtr0344774|FBtr0344774|FBtr0344776|FBtr0344776|FBtr0344776|FBtr0344777|FBtr0344777|FBtr0344777|FBtr0344779|FBtr0344779|FBtr0344779|FBtr0344780|FBtr0344780|FBtr0344780 15644181|15644181|15644181|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15644181|15644181|15644181|15646334|15646334|15646334|15646334|15646334|15646334 15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834 2L - 15646799 15646840 3'utr CG4587 FlyBase G10811.1 TGTAATCGTTCTAATTATTTTAGACTATACTGTGAGTTCTTT 10 15646804 0.985825752 2 9 85 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 2L:15646799-15646840 6 CG4587 FBtr0344779|FBtr0344779|FBtr0344779|FBtr0344780|FBtr0344780|FBtr0344780|FBtr0344776|FBtr0344776|FBtr0344776|FBtr0344777|FBtr0344777|FBtr0344777|FBtr0344773|FBtr0344773|FBtr0344773|FBtr0344774|FBtr0344774|FBtr0344774|FBtr0344778|FBtr0344778|FBtr0344778|FBtr0344775|FBtr0344775|FBtr0344775 15646334|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15644181|15644181|15644181|15646334|15646334|15646334|15646334|15646334|15646334|15644181|15644181|15644181|15646334|15646334|15646334 15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 15646777 15646822 3'utr CG4587 FlyBase G8318.1 TTTAGACTATACTGTGAGTTCTTTACGTTTCCTTTGTTAACTTATT 6 15646804 0.988047964 3 6 57 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 2L:15646777-15646822 6 7 152 FBgn0028863 451.99 9.723333333 14.98333333 0.015487068 0.719917724 0.467185762 -7 -7 -7 0.2 dme-miR-14-3p 6mer3-8 AAGACT 2L 15647128 15647133 - 2L_15647128_15647133_- 0.999967895 0.951239136 0.975603515 0.034456465 CG4587 FBtr0344778|FBtr0344775|FBtr0344773|FBtr0344774|FBtr0344776|FBtr0344777|FBtr0344779|FBtr0344780 15644181|15646334|15646334|15646334|15646334|15644181|15646334|15646334 15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834 2L - 15647112 15647146 3'utr CG4587 FlyBase G10812.1 ACTGAACAAATGGAAGACTTGAAATACCCGACAGC 5 15647122 0.903427731 2 4 20 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2L:15647112-15647146 6 CG4587 FBtr0344779|FBtr0344780|FBtr0344776|FBtr0344777|FBtr0344773|FBtr0344774|FBtr0344778|FBtr0344775 15646334|15646334|15646334|15644181|15646334|15646334|15644181|15646334 15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834 AAGACT 6mer3-8 dme-miR-14-3p 2L - 15647122 15647172 3'utr CG4587 FlyBase G8319.1 TTTACAACCAAAACTAAATCGAATTCACTGAACAAATGGAAGACTTGAAAT 6 15647136 0.94121709 3 5 26 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 2L:15647122-15647172 6 4.5 153 FBgn0028863 451.99 9.723333333 14.98333333 0.009955972 0.462804251 0.300333704 -11 3 -4 0.2 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 15727656 15727663 - 2L_15727656_15727663_- 0.625049239 0.624984949 0.625017094 4.55E-05 CycE FBtr0080777|FBtr0080776|FBtr0080773 15727579|15727579|15727579 15728880|15728880|15728880 2L - 15727607 15727688 3'utr CycE FlyBase G10821.1 ATTTAATTTTAAATAATTTCAGAACTACGCTTATATCCATGATTTGATGTTAATAAATAAACGATCGCAAAATCGTAAACTA 23 15727663 0.975729288 8 23 158 1 1.544068044 0.028571429 0.391304348 0.6 23 0 0 35 2L:15727607-15727688 8 CycE FBtr0080776|FBtr0080773|FBtr0080777 15727579|15727579|15727579 15728880|15728880|15728880 TACGCTTA 8mer-A1 dme-miR-965-3p 2L - 15727638 15727674 3'utr CycE FlyBase G8325.1 AATTTCAGAACTACGCTTATATCCATGATTTGATGTT 9 15727663 0.960119302 4 8 60 1 0.954242509 0.111111111 0 0 9 0 0 9 2L:15727638-15727674 8 14 154 FBgn0010382 855.2666667 26.80666667 41.17666667 0.016369164 0.522258145 0.339998381 0 0 0 0.2 dme-miR-317-3p 7mer-A1 GTGTTCA 2L 15727818 15727824 - 2L_15727818_15727824_- 0.823289387 0.823349562 0.823319475 4.26E-05 CycE FBtr0080775|FBtr0080777|FBtr0080774|FBtr0080776|FBtr0305561|FBtr0080773 15727782|15727579|15727782|15727579|15727782|15727579 15728880|15728880|15728880|15728880|15728880|15728880 2L - 15727797 15727852 3'utr CycE FlyBase G10822.1 CGTTAGCTTAGGCATAAATAACATGTAAGTGTTCATACGATTAAGGCTGGATTGAA 14 15727813 0.67459831 7 11 88 0.8125 0.812913357 0.0625 0.142857143 0.25 14 2 1 13 2L:15727797-15727852 7 CycE FBtr0080774|FBtr0080776|FBtr0305561|FBtr0080773|FBtr0080775|FBtr0080777 15727782|15727579|15727782|15727579|15727782|15727579 15728880|15728880|15728880|15728880|15728880|15728880 GTGTTCA 7mer-A1 dme-miR-317-3p 2L - 15727799 15727843 3'utr CycE FlyBase G8326.1 AGGCATAAATAACATGTAAGTGTTCATACGATTAAGGCTGGATTG 20 15727828 0.791528631 8 13 140 0.68 1.230448921 0.24 0.2 0.36 20 8 0 17 2L:15727799-15727843 7 15 155 FBgn0010382 855.2666667 26.80666667 41.17666667 0.01753839 0.559562298 0.36428398 -11 4 -3.5 0.2 dme-bantam-3p 6mer3-8 TGATCT 2L 15765909 15765914 + 2L_15765909_15765914_+ 0.884454739 0.991745322 0.93810003 0.075865911 CG3793 FBtr0080761|FBtr0305560 15765710|15765710 15766123|15766267 2L + 15765881 15765936 3'utr CG3793 FlyBase G4713.1 TTATCCTACACAGAGACCCACTCACAAATGATCTAATTTGTATTAATTTAGTTGTT 72 15765909 0.982706057 6 70 523 0.976470588 1.618048097 0.235294118 0.152777778 0.282352941 72 1 1 83 2L:15765881-15765936 6 CG3793 FBtr0080761|FBtr0305560 15765710|15765710 15766123|15766267 TGATCT 6mer3-8 dme-bantam-3p 2L + 15765888 15765934 3'utr CG3793 FlyBase G3654.1 ACACAGAGACCCACTCACAAATGATCTAATTTGTATTAATTTAGTTG 40 15765909 0.950972225 5 39 276 1 1.755874856 0.315789474 0.3 0.50877193 40 0 0 57 2L:15765888-15765934 6 54.5 156 FBgn0028507 251.2366667 19.03666667 29.20666667 0.216926935 2.862896165 1.866012326 0 0 0 0.2 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 2L 1594849 1594856 - 2L_1594849_1594856_- 0.624990466 0.615561032 0.620275749 0.006667663 CG31935 FBtr0077916 1594820 1595042 2L - 1594845 1594882 3'utr CG31935 FlyBase G6814.1 AATCATGCTACTCAAATTGGTGTTATTGGTGCTATGCA 48 1594857 0.784968798 6 47 417 0.982758621 1.755874856 0.224137931 0.145833333 0.293103448 48 1 0 57 2L:1594845-1594882 8 CG31935 FBtr0077916 1594820 1595042 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 2L - 1594845 1594878 3'utr CG31935 FlyBase G5325.1 ATGCTACTCAAATTGGTGTTATTGGTGCTATGCA 31 1594857 0.666701911 2 27 256 0.886363636 0.892094603 0.25 0.290322581 0.5 31 1 4 39 2L:1594845-1594878 8 39 157 FBgn0051935 254.24 10.08666667 15.46333333 0.153398364 3.866490416 2.522095279 1 1 1 0.2 dme-miR-252-5p 8mer-m1 GTACTTAG 2L 16040344 16040351 + 2L_16040344_16040351_+ 0.614951879 0.613102656 0.614027267 0.001307582 beat-Ic FBtr0343727|FBtr0080801|FBtr0343726 16039529|16039529|16039529 16041703|16040407|16041703 2L + 16040319 16040374 3'utr beat-Ic FlyBase G4730.1 GTGCTCAGTCACTGAAAATCAAAATGTACTTAGAATAAATACTATGTACTTCAAAC 11 16040343 0.96332242 3 10 64 1 1.041392685 0 0 0 11 0 0 11 2L:16040319-16040374 8 beat-Ic FBtr0343726|FBtr0080801|FBtr0343727 16039529|16039529|16039529 16041703|16040407|16041703 GTACTTAG 8mer-m1 dme-miR-252-5p 2L + 16040330 16040376 3'utr beat-Ic FlyBase G3665.1 CTGAAAATCAAAATGTACTTAGAATAAATACTATGTACTTCAAACTC 6 16040343 0.974847067 2 6 36 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2L:16040330-16040376 8 7 158 FBgn0028644 8.996666667 0.243333333 0.383333333 0.77806595 28.76712329 18.26086957 1 1 1 0.2 dme-bantam-3p 6mer3-8 TGATCT 2L 16245846 16245851 - 2L_16245846_16245851_- 0.867955212 0.79895561 0.833455411 0.048790085 PRL-1 FBtr0332358|FBtr0080856|FBtr0080857|FBtr0332357 16245833|16245833|16245833|16245833 16247074|16247074|16247074|16247074 2L - 16245829 16245885 3'utr PRL-1 FlyBase G10852.1 TTTTAAAATGTTAGTCATTACAAGGAAATAAAAATGATCTATATTAAAATTAACCAA 108 16245851 0.839246314 10 107 690 0.992 2.093421685 0.024 0.148148148 0.264 108 1 0 124 2L:16245829-16245885 6 PRL-1 FBtr0332357|FBtr0080857|FBtr0080856|FBtr0332358 16245833|16245833|16245833|16245833 16247074|16247074|16247074|16247074 TGATCT 6mer3-8 dme-bantam-3p 2L - 16245830 16245881 3'utr PRL-1 FlyBase G8347.1 AAAATGTTAGTCATTACAAGGAAATAAAAATGATCTATATTAAAATTAACCA 69 16245851 0.848801118 6 66 436 0.966292135 1.633468456 0.078651685 0.260869565 0.426966292 69 2 1 86 2L:16245830-16245881 6 83 159 FBgn0024734 9266.433333 401.94 617.5566667 0.00895706 0.206498482 0.134400622 0 0 0 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 16246491 16246498 - 2L_16246491_16246498_- 0.47287835 0.475864205 0.474371278 0.002111279 PRL-1 FBtr0332358|FBtr0080856|FBtr0080857|FBtr0332357 16245833|16245833|16245833|16245833 16247074|16247074|16247074|16247074 2L - 16246386 16246523 3'utr PRL-1 FlyBase G10854.1 CATCTATATTCTAAAACTGTAAAATGTACTTAATCGCATATTAGTTTGAAGCTCAGCCCTCAAAAATTTGCATTATTTATATTTTGTTTTTTATCTTCTTTTCACTTCGTCCACTTTTCGCTATCAATGGGTGAAGGC 216 16246499 0.982459859 10 214 1606 0.988549618 2.413299764 0.053435115 0.171296296 0.316793893 216 3 0 259 2L:16246386-16246523 8 PRL-1 FBtr0332357|FBtr0080857|FBtr0080856|FBtr0332358 16245833|16245833|16245833|16245833 16247074|16247074|16247074|16247074 GTACTTAA 8mer-A1 dme-miR-252-5p 2L - 16246462 16246519 3'utr PRL-1 FlyBase G8350.1 TATATTCTAAAACTGTAAAATGTACTTAATCGCATATTAGTTTGAAGCTCAGCCCTCA 153 16246499 0.972799835 4 149 1111 0.980952381 1.836745966 0.052380952 0.274509804 0.471428571 153 2 2 206 2L:16246462-16246519 8 178 160 FBgn0024734 9266.433333 401.94 617.5566667 0.019209117 0.442852167 0.288232659 1 1 1 0.2 dme-miR-278-3p 6mer3-8 CCCACC 2L 16247046 16247051 - 2L_16247046_16247051_- 0.907094769 0.930462503 0.918778636 0.016523459 PRL-1 FBtr0332358|FBtr0080856|FBtr0080857|FBtr0332357 16245833|16245833|16245833|16245833 16247074|16247074|16247074|16247074 2L - 16246892 16247134 stop_codon PRL-1 FlyBase G10856.1 AAGCCAAAGGCGAGACTAAAGCACAAAAATGGTCATAAGAATTCATGTTCTGTGCAATAGATTTCCAACACCATATGTATATTCCCACCAGACAAAAAGTGTTCATTTTTTCAAAAACAAAAAAAAAAAATGCAAGCGGATAGAAAAGCGCATACACAAATATGAATTGATAGGCAGCAATCCGTAAAATTGAACTAACCACAGAGAGCCCAAAAATATGGAAGGAGAAATTGAGTTACAGCC 175 16247053 0.98599814 31 153 1335 0.874371859 1.939519253 0.08040201 0.125714286 0.231155779 175 24 1 174 2L:16246892-16247134 6 PRL-1 FBtr0332357|FBtr0080857|FBtr0080856|FBtr0332358 16245833|16245833|16245833|16245833 16247074|16247074|16247074|16247074 CCCACC 6mer3-8 dme-miR-278-3p 2L - 16247021 16247177 stop_codon PRL-1 FlyBase G8352.1 CGGAGCCATTAATGCCAAGCAGCTGTCCTTTTTGGAAAAATACAAGCCAAAGGCGAGACTAAAGCACAAAAATGGTCATAAGAATTCATGTTCTGTGCAATAGATTTCCAACACCATATGTATATTCCCACCAGACAAAAAGTGTTCATTTTTTCAA 131 16247053 0.952278126 24 105 1068 0.811428571 1.374137094 0.137142857 0.27480916 0.457142857 131 28 5 142 2L:16247021-16247177 6 114.5 161 FBgn0024734 9266.433333 401.94 617.5566667 0.012356426 0.284868388 0.185408087 2 2 2 0.2 dme-miR-307a-3p 7mer-A1 GTTGTGA 2L 16260057 16260063 - 2L_16260057_16260063_- 0.782608396 0.791376304 0.78699235 0.006199842 twe FBtr0331445|FBtr0331444|FBtr0080855|FBtr0331446 16259412|16259875|16259412|16259875 16260224|16260224|16260224|16260224 2L - 16260045 16260091 3'utr twe FlyBase G10871.1 GGTTCATTTCTTGTTGCGTTGTTCAAATGTTGTGAAAGCACTTTATA 19 16260062 0.984895325 4 19 164 1 1.361727836 0.652173913 0.210526316 0.347826087 19 0 0 23 2L:16260045-16260091 7 twe FBtr0080855|FBtr0331446|FBtr0331445|FBtr0331444 16259412|16259875|16259412|16259875 16260224|16260224|16260224|16260224 GTTGTGA 7mer-A1 dme-miR-307a-3p 2L - 16260042 16260076 3'utr twe FlyBase G8366.1 GCGTTGTTCAAATGTTGTGAAAGCACTTTATATTT 10 16260062 0.677341797 4 10 74 1 1.255272505 0.722222222 0.6 0.777777778 10 0 0 18 2L:16260042-16260076 7 14.5 162 FBgn0002673 160.84 8.683333333 13.39 0.090151704 1.669865643 1.082897685 -1 -1 -1 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2L 16265188 16265193 - 2L_16265188_16265193_- 0.782408801 0.841155661 0.811782231 0.041540331 crp FBtr0343814|FBtr0080854 16263554|16264419 16265520|16265520 2L - 16265152 16265242 3'utr crp FlyBase G10884.1 TAGTAGCATCATCAGCAGCAGCAGCCACAGAAATGTTAAAGAGACTGTTACCAAACAGAGGCAGAGGCAAAAGAATGTAAATTAGTAAGAG 54 16265195 0.865602634 10 53 219 0.985294118 1.525044807 0.117647059 0.203703704 0.367647059 54 0 1 67 2L:16265152-16265242 6 crp FBtr0343814|FBtr0080854 16263554|16264419 16265520|16265520 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 16265146 16265265 3'utr crp FlyBase G8375.1 AACCTTATTGTAAGCAGTAAAACTAGTAGCATCATCAGCAGCAGCAGCCACAGAAATGTTAAAGAGACTGTTACCAAACAGAGGCAGAGGCAAAAGAATGTAAATTAGTAAGAGTTTAAC 48 16265195 0.95831287 10 44 215 0.9375 1.301029996 0.15625 0.270833333 0.453125 48 2 2 60 2L:16265146-16265265 6 39 163 FBgn0001994 2020.376667 59.00666667 90.54333333 0.019303331 0.660942266 0.430732982 2 2 2 0.2 dme-miR-305-5p 7mer-A1 GTACAAA 2L 16290916 16290922 + 2L_16290916_16290922_+ 0.782203722 0.781205561 0.781704641 0.000705763 pkaap FBtr0080826 16290778 16291195 2L + 16290875 16290957 3'utr pkaap FlyBase G4749.1 AGAAGTCGCAACAGAAGCTCTCTCTAGTACCCTCTCCTTATGTACAAATTGTGTTGAACAAATCAAATACTTTACTTTAACTT 30 16290914 0.98682668 10 29 249 0.972972973 1.255272505 0.081081081 0.166666667 0.324324324 30 0 1 36 2L:16290875-16290957 7 pkaap FBtr0080826 16290778 16291195 GTACAAA 7mer-A1 dme-miR-305-5p 2L + 16290878 16290942 3'utr pkaap FlyBase G3682.1 AGTCGCAACAGAAGCTCTCTCTAGTACCCTCTCCTTATGTACAAATTGTGTTGAACAAATCAAAT 31 16290914 0.98586447 9 30 254 0.976190476 1.311753861 0.357142857 0.258064516 0.452380952 31 0 1 41 2L:16290878-16290942 7 26.5 164 FBgn0040079 291.3133333 14.45 22.03666667 0.090967343 1.833910035 1.202541219 2 2 2 0.2 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 16296371 16296378 - 2L_16296371_16296378_- 0.621679683 0.609073725 0.615376704 0.008913788 heix FBtr0080852 16296049 16297554 2L - 16296364 16296398 3'utr heix FlyBase G10902.1 AGCGTATGCATATAAACAAATAGCTTTAAATAACA 8 16296378 0.865181327 2 6 49 0.75 0.77815125 0 0 0 8 2 0 6 2L:16296364-16296398 8 heix FBtr0080852 16296049 16297554 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 16296360 16296401 3'utr heix FlyBase G8388.1 AATAGCGTATGCATATAAACAAATAGCTTTAAATAACAAACA 10 16296378 0.902756392 2 9 55 0.909090909 0.698970004 0 0.1 0.181818182 10 0 1 10 2L:16296360-16296401 8 9 165 FBgn0028375 808.1233333 31.42 48.33666667 0.011136914 0.286441757 0.186194056 0 0 0 0.2 dme-miR-190-5p 7mer-m8 ACATATC 2L 16297344 16297350 - 2L_16297344_16297350_- 0.673845346 0.633010049 0.653427698 0.028874918 heix FBtr0080852 16296049 16297554 2L - 16297328 16297398 3'utr heix FlyBase G10905.1 ATTTCGAATGCTGCTAGTCGCCCGTTTGATTCTAAACTTTTGAACTGAACATATCCTAGCCCTAATGGGTC 15 16297342 0.864212075 6 15 92 1 1.278753601 0.052631579 0.266666667 0.421052632 15 0 0 19 2L:16297328-16297398 7 heix FBtr0080852 16296049 16297554 ACATATC 7mer-m8 dme-miR-190-5p 2L - 16297326 16297387 3'utr heix FlyBase G8390.1 TGCTAGTCGCCCGTTTGATTCTAAACTTTTGAACTGAACATATCCTAGCCCTAATGGGTCGA 9 16297343 0.820352521 4 7 65 1 1.204119983 0.0625 0.555555556 0.75 9 0 0 16 2L:16297326-16297387 7 8.5 166 FBgn0028375 808.1233333 31.42 48.33666667 0.010518196 0.270528326 0.175849941 -8 -7 -7.5 0.2 dme-miR-92b-3p 7mer-m8 GTGCAAT 2L 16297495 16297501 - 2L_16297495_16297501_- 0.657921652 0.640970047 0.64944585 0.011986662 heix FBtr0080852 16296049 16297554 2L - 16297455 16297520 3'utr heix FlyBase G10906.1 CTGAATCAGTGAGAACCTGGTGCAATGTTTTAGGGAATTTCATTAGGTTTTAGTCAATGTGAGTAA 12 16297502 0.980502958 7 10 76 0.833333333 0.698970004 0.333333333 0 0 12 1 1 10 2L:16297455-16297520 7 heix FBtr0080852 16296049 16297554 GTGCAAT 7mer-m8 dme-miR-92b-3p 2L - 16297499 16297549 3'utr heix FlyBase G8391.1 GGGTTAAACGTACGGATCTGGCGGAAAATCTGAATCAGTGAGAACCTGGTG 5 16297518 0.973126781 3 3 27 0.833333333 0.698970004 0.166666667 0.2 0.333333333 5 1 0 5 2L:16297499-16297549 2 5 167 FBgn0028375 808.1233333 31.42 48.33666667 0.006187174 0.159134309 0.103441142 1 17 9 0.2 dme-miR-31a-5p 7mer-A1 CTTGCCA 2L 16301756 16301762 - 2L_16301756_16301762_- 0.801718141 0.646026604 0.723872373 0.110090515 CG5869 FBtr0080851 16301654 16302076 2L - 16301720 16301781 3'utr CG5869 FlyBase G10913.1 AATCTTAATAGAAGCTGTGCTTGCCAAATTTCTACATGTATTTATTGTAAAGATATAAAAGC 16 16301760 0.723374332 9 16 117 1 1.397940009 0.04 0.375 0.6 16 0 0 25 2L:16301720-16301781 7 CG5869 FBtr0080851 16301654 16302076 CTTGCCA 7mer-A1 dme-miR-31a-5p 2L - 16301741 16301819 3'utr CG5869 FlyBase G8394.1 GGAGTTTTTAGTGATTTTAGTTCTTGCATTTAAGTAATAATCTTAATAGAAGCTGTGCTTGCCAAATTTCTACATGTAT 14 16301760 0.772567062 7 14 130 1 1.342422681 0.181818182 0.428571429 0.636363636 14 0 0 22 2L:16301741-16301819 7 10 168 FBgn0028894 1010.62 123.5733333 189.1366667 0.009894916 0.080923608 0.052871821 -2 -2 -2 0.2 dme-bantam-3p 6mer2-7 GATCTC 2L 16302062 16302067 - 2L_16302062_16302067_- 0.598433822 0.718212144 0.658322983 0.084696048 CG5869 FBtr0080851 16301654 16302076 2L - 16302032 16302133 stop_codon CG5869 FlyBase G10914.2 GAGATACGCGAACTAGACGAACTCACCGAGGAGTGGCTGAAAGCCAAGCTCAAGTAGAGAGGTTTCGATCTCTGGGATCAATCAATCCGGGCCGTTGTCAAA 92 16302061 0.948172567 10 87 525 0.939130435 1.556302501 0.4 0.239130435 0.391304348 92 5 2 108 2L:16302032-16302133 6 CG5869 FBtr0080851 16301654 16302076 GATCTC 6mer2-7 dme-bantam-3p 2L - 16302028 16302167 stop_codon CG5869 FlyBase G8396.1 TCTTCAGCGCGAAGTAGATCTCACACGCGTCTACGAGATACGCGAACTAGACGAACTCACCGAGGAGTGGCTGAAAGCCAAGCTCAAGTAGAGAGGTTTCGATCTCTGGGATCAATCAATCCGGGCCGTTGTCAAAAGCA 88 16302061 0.97275659 11 85 478 0.96350365 2.120573931 0.284671533 0.409090909 0.620437956 88 5 0 132 2L:16302028-16302167 6 66 169 FBgn0028894 1010.62 123.5733333 189.1366667 0.065306446 0.534095814 0.348954019 -6 -6 -6 0.2 dme-miR-304-5p 7mer-m8 TGAGATT 2L 16305881 16305887 - 2L_16305881_16305887_- 0.593276344 0.620172007 0.606724175 0.019018132 CG5861 FBtr0080850 16305799 16305958 2L - 16305848 16305907 3'utr CG5861 FlyBase G10918.1 TTTGGTGTTGTCAGAGAAATTGAGATTTTGTAACAAAGACAACAATTACGGTTTAGAGAA 19 16305887 0.826703406 6 18 135 1 1.431363764 0.37037037 0.315789474 0.518518519 19 0 0 27 2L:16305848-16305907 7 CG5861 FBtr0080850 16305799 16305958 TGAGATT 7mer-m8 dme-miR-304-5p 2L - 16305874 16305904 3'utr CG5861 FlyBase G8398.1 GGTGTTGTCAGAGAAATTGAGATTTTGTAAC 5 16305888 0.800498582 2 5 45 1 0.84509804 0.571428571 0.4 0.571428571 5 0 0 7 2L:16305874-16305904 7 9.5 170 FBgn0015338 312.2366667 33.98666667 51.41 0.030425639 0.279521381 0.184788952 0 1 0.5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 16309163 16309168 + 2L_16309163_16309168_+ 0.769876796 0.560930378 0.665403587 0.147747416 Syx5 FBtr0080832|FBtr0080831 16309130|16309130 16309274|16309274 2L + 16309123 16309197 stop_codon Syx5 FlyBase G4760.1 ATGTCGTAATCAAACGCCAGTTGCCCATTAAAAGCCCCATGTACCTATCCATGTATACAGCTTTTTATTTTAATC 22 16309162 0.960240976 6 22 110 1 1.414973348 0 0.181818182 0.307692308 22 0 0 26 2L:16309123-16309197 6 Syx5 FBtr0080832|FBtr0080831 16309130|16309130 16309274|16309274 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 16309136 16309183 3'utr Syx5 FlyBase G3691.1 ACGCCAGTTGCCCATTAAAAGCCCCATGTACCTATCCATGTATACAGC 16 16309162 0.953664802 2 14 60 1 1.278753601 0.052631579 0.266666667 0.421052632 15 0 0 19 2L:16309136-16309183 6 17 171 FBgn0011708 839 57.82 88.43666667 0.020262217 0.294015911 0.19222796 1 1 1 0.2 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2L 16309761 16309766 - 2L_16309761_16309766_- 0.670974572 0.842462519 0.756718546 0.121260257 cni FBtr0080848|FBtr0080849|FBtr0337082 16309594|16309594|16309290 16309902|16309902|16309902 2L - 16309728 16309781 3'utr cni FlyBase G10925.1 ACTTCACTTGTAAATTCTAGTGTAAATCCATAAAGACATCTTGAAGCTTTGTTT 14 16309767 0.986721575 4 14 120 1 1.255272505 0 0.285714286 0.444444444 14 0 0 18 2L:16309728-16309781 6 cni FBtr0080849|FBtr0337082|FBtr0080848 16309594|16309290|16309594 16309902|16309902|16309902 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2L - 16309729 16309776 3'utr cni FlyBase G8401.1 ACTTGTAAATTCTAGTGTAAATCCATAAAGACATCTTGAAGCTTTGTT 12 16309767 0.784609783 4 12 93 1 1.204119983 0 0.333333333 0.5 12 0 0 16 2L:16309729-16309776 6 10.5 172 FBgn0000339 410.67 56.70333333 85.98333333 0.025567974 0.185174299 0.122116689 1 1 1 0.2 dme-bantam-3p 7mer-A1 GATCTCA 2L 16309879 16309885 - 2L_16309879_16309885_- 0.823255971 0.805288088 0.81427203 0.012705224 cni FBtr0080848|FBtr0080849|FBtr0337082 16309594|16309594|16309290 16309902|16309902|16309902 2L - 16309857 16309924 stop_codon cni FlyBase G10926.1 TTATTCGCTCATCTCGACATAGGCAAGCTCTTGCCTGGGGATCTCAGTGTTGGCGCCAACGCATCAGC 32 16309877 0.98253826 7 29 219 0.891891892 1.51851394 0.081081081 0.15625 0.27027027 32 4 0 33 2L:16309857-16309924 7 cni FBtr0080849|FBtr0337082|FBtr0080848 16309594|16309290|16309594 16309902|16309902|16309902 GATCTCA 7mer-A1 dme-bantam-3p 2L - 16309861 16309919 stop_codon cni FlyBase G8402.1 CGCTCATCTCGACATAGGCAAGCTCTTGCCTGGGGATCTCAGTGTTGGCGCCAACGCAT 33 16309877 0.919761546 5 31 218 0.962962963 1.414973348 0.018518519 0.545454545 0.722222222 33 1 1 52 2L:16309861-16309919 7 28 173 FBgn0000339 410.67 56.70333333 85.98333333 0.068181265 0.493798131 0.325644505 -8 -8 -8 0.2 dme-miR-305-3p 7mer-m8 ATGTGCC 2L 16312998 16313004 + 2L_16312998_16313004_+ 0.6735704 0.674515289 0.674042844 0.000668145 fzy FBtr0080833 16312826 16313097 2L + 16312976 16313019 3'utr fzy FlyBase G4772.1 AATTACGGATAAATCTCTGATTATGTGCCCCCGCCGACGATATA 7 16312992 0.979340395 4 6 46 0.888888889 0.903089987 0.222222222 0.142857143 0.333333333 7 1 0 8 2L:16312976-16313019 7 fzy FBtr0080833 16312826 16313097 ATGTGCC 7mer-m8 dme-miR-305-3p 2L + 16312969 16313021 3'utr fzy FlyBase G3699.1 ACTTTGTAATTACGGATAAATCTCTGATTATGTGCCCCCGCCGACGATATATG 8 16312994 0.972907743 6 7 45 1 0.954242509 0.333333333 0.125 0.222222222 8 0 0 9 2L:16312969-16313021 7 5.5 174 FBgn0001086 1113.016667 67.49 102.82 0.004941525 0.081493555 0.053491539 6 4 5 0.2 dme-miR-252-5p 7mer-m8 GTACTTA 2L 16313186 16313192 - 2L_16313186_16313192_- 0.576031607 0.553317612 0.564674609 0.016061223 cact FBtr0337081|FBtr0080844|FBtr0080845|FBtr0080847 16313095|16313095|16313034|16313095 16313378|16313378|16313378|16313378 2L - 16313141 16313216 3'utr cact FlyBase G10928.1 TGCATCCAGGAAATGGAACCTTATGTACTTACTGTCCCGGCACGTGGGAATCCGAAACGAATAGAATTCCTTGTGT 120 16313193 0.983688937 6 118 919 0.985815603 2.1430148 0.14893617 0.166666667 0.290780142 120 2 0 139 2L:16313141-16313216 7 cact FBtr0080847|FBtr0337081|FBtr0080844|FBtr0080845 16313095|16313095|16313095|16313034 16313378|16313378|16313378|16313378 GTACTTA 7mer-m8 dme-miR-252-5p 2L - 16313166 16313209 3'utr cact FlyBase G8404.1 AGGAAATGGAACCTTATGTACTTACTGTCCCGGCACGTGGGAAT 68 16313193 0.723457135 4 64 523 0.949494949 1.973127854 0.212121212 0.352941176 0.555555556 68 5 0 94 2L:16313166-16313209 7 92 175 FBgn0000250 1526.01 89.34 137.2866667 0.06028794 1.029773897 0.670130627 1 1 1 0.2 dme-miR-184-3p 6mer2-7 CCGTCC 2L 16354263 16354268 + 2L_16354263_16354268_+ 0.996614161 0.996967538 0.996790849 0.000249821 CG4455 FBtr0080836 16353552 16354539 2L + 16354168 16354436 3'utr CG4455 FlyBase G4781.1 ACGCAACCCAATTTGCATTAAGAATCCGAATCGTACTAACAGACGAACTCTTCGTGATGCCTCGAATTTTGCACTACATTTTAAAACGCCGATTCCCGTCCCTTTATATACACAGGTTGTACTTAAATCGAAACCAAGTACTTAATAATTGTACCATGCCAATCATAGTTTAAGCGCCAATCTGCCGCCACGAATACATTTAAGAAATCTTCAGTTTGTGCATTTAGACCAGCATGAGTATCCTTCTATATATTGTGTCAAAAAAAACG 505 16354260 0.976422367 41 484 3115 0.953895072 1.93305321 0.06200318 0.194059406 0.352941176 505 23 6 600 2L:16354168-16354436 6 CG4455 FBtr0080836 16353552 16354539 CCGTCC 6mer2-7 dme-miR-184-3p 2L + 16354204 16354396 3'utr CG4455 FlyBase G3707.1 TAACAGACGAACTCTTCGTGATGCCTCGAATTTTGCACTACATTTTAAAACGCCGATTCCCGTCCCTTTATATACACAGGTTGTACTTAAATCGAAACCAAGTACTTAATAATTGTACCATGCCAATCATAGTTTAAGCGCCAATCTGCCGCCACGAATACATTTAAGAAATCTTCAGTTTGTGCATTTAGAC 352 16354260 0.914340584 26 330 2000 0.940839695 1.613665673 0.041984733 0.372159091 0.578244275 352 20 11 493 2L:16354204-16354396 6 303.5 176 FBgn0028506 237.38 18.83333333 28.63666667 1.278540736 16.11504425 10.59830055 3 3 3 0.2 dme-miR-14-3p 6mer3-8 AAGACT 2L 16400240 16400245 - 2L_16400240_16400245_- 0.660293752 0.97295797 0.816625861 0.221086976 CG5888 FBtr0340234|FBtr0080880 16400173|16400173 16400500|16400500 2L - 16400198 16400378 3'utr CG5888 FlyBase G10973.1 CTTAAAATTAATACTCCCATATATGTTCACCTGCTAAGTATCTTTTGAAATATAACACGATTTGTATCTTTAGTGTAAAAGTTTTGAAATAGTTGCTATCATTAAAGACTATAATTTTATGTTTGCTGATTGTAAGACTATAAAATCGAAAAGTTGGAAATATTACTGTATCAATAAACTT 80 16400248 0.988673082 27 74 699 0.91 1.959041392 0.2 0.2 0.36 80 9 0 91 2L:16400198-16400378 6 CG5888 FBtr0340234|FBtr0080880 16400173|16400173 16400500|16400500 AAGACT 6mer3-8 dme-miR-14-3p 2L - 16400220 16400286 3'utr CG5888 FlyBase G8435.1 TTGCTATCATTAAAGACTATAATTTTATGTTTGCTGATTGTAAGACTATAAAATCGAAAAGTTGGAA 20 16400248 0.968553142 7 18 148 0.862068966 1.397940009 0.551724138 0.35 0.551724138 20 4 0 25 2L:16400220-16400286 6 22.5 177 FBgn0028523 337.3833333 21.57333333 32.72 0.06668972 1.042954265 0.687652812 3 3 3 0.2 dme-miR-304-5p 8mer-A1 TGAGATTA 2L 16400411 16400418 - 2L_16400411_16400418_- 0.625333976 0.625350114 0.625342045 1.14E-05 CG5888 FBtr0340234|FBtr0080880 16400173|16400173 16400500|16400500 2L - 16400395 16400440 3'utr CG5888 FlyBase G10974.1 TAGCTTATTTCTGAGACTATAATGAGATTAAAATAGGCTGAAGCTA 102 16400407 0.811007327 10 90 550 0.889830508 1.176091259 0.355932203 0.12745098 0.245762712 102 7 6 105 2L:16400395-16400440 8 CG5888 FBtr0340234|FBtr0080880 16400173|16400173 16400500|16400500 TGAGATTA 8mer-A1 dme-miR-304-5p 2L - 16400395 16400440 3'utr CG5888 FlyBase G8437.1 TAGCTTATTTCTGAGACTATAATGAGATTAAAATAGGCTGAAGCTA 71 16400407 0.764266672 8 66 350 0.921568627 1.194976603 0.450980392 0.352112676 0.549019608 71 3 5 94 2L:16400395-16400440 8 82.5 178 FBgn0028523 337.3833333 21.57333333 32.72 0.244528973 3.824165637 2.521393643 -11 -11 -11 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 16508867 16508872 - 2L_16508867_16508872_- 0.999637386 0.999996958 0.999817172 0.000254276 CG5953 FBtr0337091 16508076 16510135 2L - 16508848 16508895 3'utr CG5953 FlyBase G10985.1 AAAAATATATAATATATATCATTGTACCTTATTTTGAAACAGAGATGT 37 16508873 0.93267216 6 35 410 0.957446809 1.352182518 0 0.216216216 0.382978723 37 1 1 45 2L:16508848-16508895 6 CG5953 FBtr0337091 16508076 16510135 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L - 16508845 16508893 3'utr CG5953 FlyBase G8448.1 AAATATATAATATATATCATTGTACCTTATTTTGAAACAGAGATGTTTT 18 16508873 0.696121129 3 18 203 1 1.380211242 0 0.277777778 0.458333333 18 0 0 24 2L:16508845-16508893 6 27 179 FBgn0032587 1367.886667 37.83 57.85 0.019738477 0.71371927 0.466724287 1 1 1 0.2 dme-miR-8-3p 8mer-A1 CAGTATTA 2L 16509284 16509291 - 2L_16509284_16509291_- 0.656444468 0.662092906 0.659268687 0.003994022 CG5953 FBtr0337091|FBtr0301144|FBtr0080874|FBtr0080873 16508076|16509118|16509118|16509118 16510135|16510135|16510135|16510135 2L - 16509203 16509310 3'utr CG5953 FlyBase G10987.1 CGTCTAACTAGCAGAATCTCAGTATTAACTATAAAATACACTTTACATAGGGATCCAAGCATTTGCCATAGATCGTTTCCTTTGGGGCCCGATCGTCCACTTCTGGGT 29 16509292 0.986117033 8 24 210 0.833333333 1.397940009 0.2 0.034482759 0.066666667 29 5 0 25 2L:16509203-16509310 8 CG5953 FBtr0080874|FBtr0080873|FBtr0337091|FBtr0301144 16509118|16509118|16508076|16509118 16510135|16510135|16510135|16510135 CAGTATTA 8mer-A1 dme-miR-8-3p 2L - 16509272 16509313 3'utr CG5953 FlyBase G8451.1 AGACGTCTAACTAGCAGAATCTCAGTATTAACTATAAAATAC 20 16509292 0.781826373 4 19 127 0.961538462 1.397940009 0.153846154 0.25 0.423076923 20 1 0 25 2L:16509272-16509313 8 18 180 FBgn0032587 1367.886667 37.83 57.85 0.013158985 0.475812847 0.311149525 1 1 1 0.2 dme-miR-305-5p 7mer-A1 GTACAAA 2L 16509900 16509906 - 2L_16509900_16509906_- 0.628915564 0.702020663 0.665468113 0.051693112 CG5953 FBtr0337091|FBtr0301144|FBtr0080874|FBtr0080873 16508076|16509118|16509118|16509118 16510135|16510135|16510135|16510135 2L - 16509865 16510035 3'utr CG5953 FlyBase G10990.1 GGAGCCTTCTCGCCCCGCAGCATGGCAAGTGAATTCCATTTGATGAAATAGTCGACAGAGAGTAGTAGGCAAATACAGAGAACACAGTACAACTTATTTTTAGTTTGGCCAGGATCGGGGTCACCACTTGTACAAAGCTTGGCTTGAACGGGGGCAGTGTTACTTAGCCGG 95 16509908 0.970790249 16 86 518 0.880733945 1.681241237 0.330275229 0.126315789 0.23853211 95 12 1 96 2L:16509865-16510035 7 CG5953 FBtr0080874|FBtr0080873|FBtr0337091|FBtr0301144 16509118|16509118|16508076|16509118 16510135|16510135|16510135|16510135 GTACAAA 7mer-A1 dme-miR-305-5p 2L - 16509860 16510034 3'utr CG5953 FlyBase G8456.1 GAGCCTTCTCGCCCCGCAGCATGGCAAGTGAATTCCATTTGATGAAATAGTCGACAGAGAGTAGTAGGCAAATACAGAGAACACAGTACAACTTATTTTTAGTTTGGCCAGGATCGGGGTCACCACTTGTACAAAGCTTGGCTTGAACGGGGGCAGTGTTACTTAGCCGGAAAGA 66 16509908 0.972483331 18 59 356 0.899082569 1.991226076 0.330275229 0.46969697 0.678899083 66 11 0 98 2L:16509860-16510034 7 45.5 181 FBgn0032587 1367.886667 37.83 57.85 0.03326299 1.202749141 0.786516854 2 2 2 0.2 dme-miR-277-3p 7mer-m8 TGCATTT 2L 16662861 16662867 + 2L_16662861_16662867_+ 0.613841231 0.4758904 0.544865815 0.097545946 CG42389 FBtr0335497 16661777 16663218 2L + 16662828 16662873 3'utr CG42389 FlyBase G4880.1 GGGGGCTGCTATATTCGCTGGCAATCCAACTGTTGCATTTCACAAC 10 16662860 0.689674502 5 9 59 0.923076923 1.079181246 0.307692308 0.3 0.461538462 10 1 0 12 2L:16662828-16662873 7 CG42389 FBtr0335497 16661777 16663218 TGCATTT 7mer-m8 dme-miR-277-3p 2L + 16662817 16662877 3'utr CG42389 FlyBase G3799.1 GCAACCCCAGTGGGGGCTGCTATATTCGCTGGCAATCCAACTGTTGCATTTCACAACCAAC 10 16662841 0.873268497 4 8 55 0.846153846 1.041392685 0.307692308 0.3 0.461538462 10 2 0 11 2L:16662817-16662877 7 5.5 182 FBgn0259735 3930.076667 62.35333333 96.36 0.001399464 0.088206992 0.057077626 1 20 10.5 0.2 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 16663038 16663043 + 2L_16663038_16663043_+ 0.66118419 0.784790238 0.722987214 0.087402641 CG42389 FBtr0335497 16661777 16663218 2L + 16663009 16663078 3'utr CG42389 FlyBase G4882.1 AATGTAATTGTTTCTTTCCATAGCATTTAATGTGAATTATACAAAACGGATTCTTATCTAAAAAACCAAG 32 16663021 0.860041263 9 30 305 0.947368421 1.255272505 0.289473684 0.125 0.263157895 32 1 1 36 2L:16663009-16663078 6 CG42389 FBtr0335497 16661777 16663218 ATGTGA 6mer3-8 dme-miR-1003-3p 2L + 16663014 16663075 3'utr CG42389 FlyBase G3801.1 AATTGTTTCTTTCCATAGCATTTAATGTGAATTATACAAAACGGATTCTTATCTAAAAAACC 15 16663020 0.874298366 8 15 127 1 1.342422681 0.045454545 0.4 0.590909091 15 0 0 22 2L:16663014-16663075 6 13.5 183 FBgn0259735 3930.076667 62.35333333 96.36 0.003435047 0.216508072 0.140099626 17 18 17.5 0.2 dme-miR-283-5p 6mer3-8 TGATAT 2L 16681598 16681603 + 2L_16681598_16681603_+ 0.771773563 0.66856512 0.720169341 0.07297943 squ FBtr0335140|FBtr0305565|FBtr0080887 16681443|16681443|16681443 16681653|16681653|16681653 2L + 16681583 16681620 3'utr squ FlyBase G4898.1 AGAAAGAAAAATACTTGATATCATAGGGTAAACAAAAT 107 16681597 0.697261625 5 105 636 0.975206612 1.594760753 0.024793388 0.112149533 0.214876033 107 1 2 118 2L:16681583-16681620 6 squ FBtr0080887|FBtr0335140|FBtr0305565 16681443|16681443|16681443 16681653|16681653|16681653 TGATAT 6mer3-8 dme-miR-283-5p 2L + 16681536 16681625 3'utr squ FlyBase G3815.1 AACGTCGTTTAGAAAACCGAATTTATATTGGATGCAGTTCTACAAATAGAAAGAAAAATACTTGATATCATAGGGTAAACAAAATATTTA 86 16681597 0.975047993 6 85 537 0.991071429 2.045322979 0.089285714 0.197674419 0.383928571 86 1 0 111 2L:16681536-16681625 6 93.5 184 FBgn0267347 773.79 92.38333333 140.8866667 0.120833818 1.012087317 0.663654001 1 1 1 0.2 dme-miR-305-3p 6mer3-8 ATGTGC 2L 16699762 16699767 + 2L_16699762_16699767_+ 0.999999157 0.999780554 0.999889856 0.000154574 grp FBtr0080886|FBtr0100459|FBtr0080884|FBtr0339514|FBtr0080885 16699640|16699640|16699640|16699640|16699640 16699926|16699926|16699926|16699926|16699926 2L + 16699750 16699773 3'utr grp FlyBase G4915.1 CTAAAATTCTCAATGTGCTAACTT 5 16699757 0.769838117 2 4 37 0.8 0.602059991 0 0 0 5 1 0 4 2L:16699750-16699773 6 grp FBtr0080885|FBtr0080884|FBtr0339514|FBtr0080886|FBtr0100459 16699640|16699640|16699640|16699640|16699640 16699926|16699926|16699926|16699926|16699926 ATGTGC 6mer3-8 dme-miR-305-3p 2L + 16699751 16699786 3'utr grp FlyBase G3833.1 TAAAATTCTCAATGTGCTAACTTATTTTTAATTCAT 10 16699763 0.746083946 4 8 100 0.785714286 1.041392685 0 0.2 0.428571429 10 3 0 11 2L:16699751-16699786 6 7.5 185 FBgn0261278 1105.166667 59.92666667 91.90666667 0.006786307 0.125152965 0.081604526 5 -1 2 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 16705113 16705118 - 2L_16705113_16705118_- 0.677825249 0.67232917 0.67507721 0.003886259 CG31808 FBtr0303445 16704284 16705521 2L - 16705095 16705140 3'utr CG31808 FlyBase G11015.1 AACGGAATTTCTCGCGCCTTTCGTACCTTTTGTATTGTAATAAGTC 23 16705111 0.707252985 6 21 227 0.903225806 1.447158031 0.064516129 0.304347826 0.483870968 23 3 0 28 2L:16705095-16705140 6 CG31808 FBtr0303445 16704284 16705521 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L - 16705099 16705140 3'utr CG31808 FlyBase G8474.1 AACGGAATTTCTCGCGCCTTTCGTACCTTTTGTATTGTAATA 13 16705111 0.701802266 3 13 126 1 1.342422681 0.090909091 0.461538462 0.681818182 13 0 0 22 2L:16705099-16705140 6 17 186 FBgn0062978 13.66666667 0.833333333 1.236666667 1.243902439 20.4 13.74663073 -7 -7 -7 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC 2L 16723429 16723435 - 2L_16723429_16723435_- 0.661612404 0.661605217 0.66160881 5.09E-06 VhaSFD FBtr0080942|FBtr0335143|FBtr0080941|FBtr0080940 16723230|16722881|16723230|16723230 16723992|16723818|16723818|16723818 2L - 16723356 16723576 3'utr VhaSFD FlyBase G11016.1 AAGTATTGAGAGAAAAATTCGATTTTTTGTTGGCATTCCAAAAAGCAATTCACTGTAATGGCAGAACAAATACAAGCAACTATCCTCTACAAATTGTTCCATTCAATTCGATTGTTTATATATTTTGTTGTTATTATTATTTGTGTTCTTAATTTTATGAGTGCGCCGCTGTACAGAGTTTTTCTAAACCAGATGATATGCGCTTCTTACGTTTATATAGT 35 16723436 0.991898932 15 34 375 0.953488372 1.612783857 0.209302326 0.171428571 0.325581395 35 2 0 41 2L:16723356-16723576 7 VhaSFD FBtr0080941|FBtr0080940|FBtr0080942|FBtr0335143 16723230|16723230|16723230|16722881 16723818|16723818|16723992|16723818 TGTGTTC 7mer-m8 dme-miR-317-3p 2L - 16723415 16723455 3'utr VhaSFD FlyBase G8476.1 ATTTTGTTGTTATTATTATTTGTGTTCTTAATTTTATGAGT 15 16723436 0.803846157 2 11 209 0.740740741 1.301029996 0.222222222 0.428571429 0.703703704 14 7 0 20 2L:16723415-16723455 7 15 187 FBgn0027779 484.9333333 25.11333333 38.29666667 0.030932087 0.597292275 0.391678997 1 1 1 0.2 dme-miR-14-3p 6mer3-8 AAGACT 2L 16746943 16746948 + 2L_16746943_16746948_+ 0.959036877 0.880233887 0.919635382 0.055722136 CG17912 FBtr0343767 16746627 16748781 2L + 16746918 16746956 3'utr CG17912 FlyBase G4935.1 ATGGTTAACCGAAACGCACACTCATAAGACTAATCTGAA 13 16746942 0.941258907 4 12 50 0.928571429 1.113943352 0.214285714 0.076923077 0.142857143 13 1 0 13 2L:16746918-16746956 6 CG17912 FBtr0343767 16746627 16748781 AAGACT 6mer3-8 dme-miR-14-3p 2L + 16746929 16746955 3'utr CG17912 FlyBase G3849.1 AAACGCACACTCATAAGACTAATCTGA 15 16746941 0.744566897 3 12 60 0.85 0.929418926 0.35 0.333333333 0.5 15 2 1 17 2L:16746929-16746955 6 14 188 FBgn0032600 1948.576667 105.4366667 161.06 0.007184731 0.132781132 0.086924128 1 2 1.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2L 16835168 16835174 - 2L_16835168_16835174_- 0.823349562 0.823328034 0.823338798 1.53E-05 CG13283 FBtr0080928 16835134 16835259 2L - 16835142 16835202 3'utr CG13283 FlyBase G11085.1 AAAAAATAAAATGTATTGTTATATTTACCTAGTCATTGGAAATATACTTGTTATCAACATT 15 16835181 0.989186626 8 15 142 1 1.230448921 0.058823529 0.133333333 0.235294118 15 0 0 17 2L:16835142-16835202 7 CG13283 FBtr0080928 16835134 16835259 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 16835160 16835190 3'utr CG13283 FlyBase G8531.1 GTATTGTTATATTTACCTAGTCATTGGAAAT 9 16835179 0.623950934 5 9 86 1 1.041392685 0.545454545 0.111111111 0.272727273 9 0 0 11 2L:16835160-16835190 7 10.5 189 FBgn0032613 497 28.40666667 43.38333333 0.021126761 0.369631542 0.242028429 7 5 6 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 2L 16886094 16886100 + 2L_16886094_16886100_+ 0.521206237 0.521203002 0.52120462 2.26E-06 CG31743 FBtr0080947|FBtr0340171 16886024|16886024 16886319|16886319 2L + 16885959 16886149 stop_codon CG31743 FlyBase G4977.1 ATATGAGGATGACTTTCGACTCTTTGACTACGCACTGGACGAGGTACTCGGCTTTGAGTTTGGCTAATTGTGAATGAAAAGCTGCTCTCTCAATATCCCCAAGTCACCACCATAACGCTTTCCACTGGAAAAGATTGTGATTTTAGGCTAGGACTTGTAGATTTAGGTGCACTCCCATGCGAATATTATTT 581 16886093 0.933615634 31 559 4781 0.963358779 1.896939372 0.116030534 0.111876076 0.21221374 581 17 7 631 2L:16885959-16886149 7 CG31743 FBtr0340171|FBtr0080947 16886024|16886024 16886319|16886319 TGTGATT 7mer-m1 dme-miR-308-3p 2L + 16885957 16886139 stop_codon CG31743 FlyBase G3873.1 ATATATGAGGATGACTTTCGACTCTTTGACTACGCACTGGACGAGGTACTCGGCTTTGAGTTTGGCTAATTGTGAATGAAAAGCTGCTCTCTCAATATCCCCAAGTCACCACCATAACGCTTTCCACTGGAAAAGATTGTGATTTTAGGCTAGGACTTGTAGATTTAGGTGCACTCCCATGCG 388 16886093 0.986406284 31 366 3119 0.933913043 1.775731776 0.114782609 0.360824742 0.568695652 388 30 8 537 2L:16885957-16886139 7 411 190 FBgn0032618 47.81666667 2.756666667 4.25 8.595329383 149.0931076 96.70588235 1 1 1 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 2L 16886197 16886202 + 2L_16886197_16886202_+ 0.643341768 0.596836876 0.620089322 0.03288393 CG31743 FBtr0080947|FBtr0340171 16886024|16886024 16886319|16886319 2L + 16886177 16886224 3'utr CG31743 FlyBase G4978.1 ACAAATGTTTCCAAGGGTTTTTGACTGTAAAACTTAGTTATAATCATT 104 16886197 0.708366811 9 94 983 0.898305085 1.72427587 0.008474576 0.125 0.228813559 104 11 1 106 2L:16886177-16886224 6 CG31743 FBtr0340171|FBtr0080947 16886024|16886024 16886319|16886319 TTGACT 6mer3-8 dme-miR-1012-3p 2L + 16886146 16886224 3'utr CG31743 FlyBase G3874.1 ATTTTTGTTCTGTATACATACCTTCCCGCGCACAAATGTTTCCAAGGGTTTTTGACTGTAAAACTTAGTTATAATCATT 89 16886197 0.671865876 12 75 777 0.854700855 1.15490196 0.034188034 0.280898876 0.452991453 89 11 6 100 2L:16886146-16886224 6 84 191 FBgn0032618 47.81666667 2.756666667 4.25 1.756709655 30.47158404 19.76470588 0 0 0 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 16916732 16916738 + 2L_16916732_16916738_+ 0.604205112 0.59950842 0.601856766 0.003321068 tweek FBtr0304930|FBtr0304927|FBtr0304929|FBtr0340173|FBtr0304928|FBtr0340172 16916563|16916563|16916563|16916563|16916563|16916563 16917052|16917052|16917052|16917052|16917052|16917052 2L + 16916659 16916803 3'utr tweek FlyBase G5007.1 TTTTTATTATTTATTACCCTGGTTGACCTAGCATGCTTTAAGATTGAAACTGGCGGTATTATGTGGCCAGTATGGCAGCTTCATATATAATGTAAATGGTTTGCTCTCGTTCCCCTTCTTTTTAAGCGTATCTGTATACTCTTTC 349 16916731 0.863210858 24 343 2201 0.986516854 2.341434525 0.042696629 0.220630372 0.388764045 349 5 1 439 2L:16916659-16916803 7 tweek FBtr0340172|FBtr0304928|FBtr0340173|FBtr0304929|FBtr0304927|FBtr0304930 16916563|16916563|16916563|16916563|16916563|16916563 16917052|16917052|16917052|16917052|16917052|16917052 GGCAGCT 7mer-m8 dme-miR-980-3p 2L + 16916656 16916756 3'utr tweek FlyBase G3896.1 AAGTTTTTATTATTTATTACCCTGGTTGACCTAGCATGCTTTAAGATTGAAACTGGCGGTATTATGTGGCCAGTATGGCAGCTTCATATATAATGTAAATG 220 16916731 0.974763009 16 208 1257 0.979228487 2.51851394 0.059347181 0.406392694 0.614243323 219 7 0 330 2L:16916656-16916756 7 254 192 FBgn0261671 3032.533333 22.31666667 34.24333333 0.083758354 11.38162808 7.41750219 1 1 1 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2L 1696897 1696903 + 2L_1696897_1696903_+ 0.738997389 0.567620551 0.65330897 0.121181697 chinmo FBtr0303933|FBtr0077878|FBtr0303934|FBtr0307047|FBtr0077877|FBtr0303935 1696856|1696148|1696856|1696148|1696148|1696148 1698617|1697837|1698617|1704682|1698617|1698617 2L + 1696831 1697056 stop_codon chinmo FlyBase G1044.2 ACGCCCAAGGTCAATGTGGAGCAATAGGATGAGGAGAAACGAGGAGATGCCCCCAGAGGATGCCCCCCAAAGAAGCTGCTTAGATTTAGGCTAAGAATCGATGAAACGACGGAGTGAAAGATAGACGAGTGATTTACGCGCGCGCAAAGAAGATGAAACATGACTACTGATGCAACTGCTGTTGCCCTCGGAGACCACCTACGACCAAGCTGGACAAGAAGCCCCA 130 1696891 0.99997418 23 124 515 0.95862069 1.841984805 0.296551724 0.069230769 0.165517241 130 5 1 139 2L:1696831-1697056 7 chinmo FBtr0077877|FBtr0303935|FBtr0303934|FBtr0307047|FBtr0303933|FBtr0077878 1696148|1696148|1696856|1696148|1696856|1696148 1698617|1698617|1698617|1704682|1698617|1697837 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2L + 1696854 1697016 stop_codon chinmo FlyBase G824.1 ATAGGATGAGGAGAAACGAGGAGATGCCCCCAGAGGATGCCCCCCAAAGAAGCTGCTTAGATTTAGGCTAAGAATCGATGAAACGACGGAGTGAAAGATAGACGAGTGATTTACGCGCGCGCAAAGAAGATGAAACATGACTACTGATGCAACTGCTGTTGCC 86 1696891 0.981443073 19 84 368 0.984 2.089905111 0.264 0.290697674 0.512 86 2 0 123 2L:1696854-1697016 7 40 193 FBgn0086758 5795.003333 67.42333333 103.87 0.006902498 0.593266426 0.385096756 6 6 6 0.2 dme-miR-92b-3p 6mer2-7 TGCAAT 2L 1698806 1698811 + 2L_1698806_1698811_+ 0.57349164 0.70235911 0.637925375 0.091123083 chinmo FBtr0307047 1696148 1704682 2L + 1698791 1698857 3'utr chinmo FlyBase G1051.1 ATCTAAGATCCAAAATGCAATGGAAAATATTGAGAAAATCTGCCAAGGCTAGCAAGTTCTTGGCCTG 11 1698806 0.963622621 7 10 54 0.923076923 1.079181246 0.384615385 0.181818182 0.307692308 11 1 0 12 2L:1698791-1698857 6 chinmo FBtr0307047 1696148 1704682 TGCAAT 6mer2-7 dme-miR-92b-3p 2L + 1698790 1698858 3'utr chinmo FlyBase G830.1 AATCTAAGATCCAAAATGCAATGGAAAATATTGAGAAAATCTGCCAAGGCTAGCAAGTTCTTGGCCTGT 8 1698808 0.935412167 6 8 32 1 1.255272505 0.277777778 0.625 0.833333333 8 0 0 18 2L:1698790-1698858 6 5.5 194 FBgn0086758 5795.003333 67.42333333 103.87 0.000949094 0.081574134 0.052950804 0 -2 -1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 1699298 1699305 + 2L_1699298_1699305_+ 0.649783344 0.649681339 0.649732342 7.21E-05 chinmo FBtr0307047|FBtr0307047|FBtr0307047 1696148|1696148|1696148 1704682|1704682|1704682 2L + 1699255 1699336 3'utr chinmo FlyBase G1054.1 ATGCAGATGCAGACTACCAGTGTCACCCGATCCCCAGTTTGTTCTGTGATATCGTTTTCAAGTTGCAAGAACGAGTGGCGTT 87 1699296 0.989004859 13 76 838 0.834951456 1.457377197 0.223300971 0.149425287 0.281553398 87 15 2 86 2L:1699255-1699336 8 chinmo FBtr0307047|FBtr0307047|FBtr0307047 1696148|1696148|1696148 1704682|1704682|1704682 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 1699242 1699322 3'utr chinmo FlyBase G832.1 CTAACCATAGAAGATGCAGATGCAGACTACCAGTGTCACCCGATCCCCAGTTTGTTCTGTGATATCGTTTTCAAGTTGCAA 42 1699296 0.991286337 12 35 397 0.85 1.707570176 0.183333333 0.333333333 0.533333333 42 9 0 51 2L:1699242-1699322 8 58.5 195 FBgn0086758 5795.003333 67.42333333 103.87 0.010094904 0.867652148 0.563204005 2 2 2 0.2 dme-miR-79-3p 7mer-A1 AGCTTTA 2L 1700007 1700013 + 2L_1700007_1700013_+ 0.82334149 0.818636324 0.820988907 0.003327079 chinmo FBtr0307047 1696148 1704682 2L + 1699969 1700139 3'utr chinmo FlyBase G1057.2 ACCGAATGTTTCGCTGTAATCGAAGATGCTATCAAGAAAGCTTTAGTTCTTAGTTCGATTATCGGTTAGCTAGCTAGCTAGTGGCTAAGTGGCACCTAAGTTTAGTAGGAGGATTTAATTTTAAATGCAAAAGACACAATCACACACAATGAACACACAATAGCAATAATA 43 1700011 0.918129811 23 37 286 0.882352941 1.176091259 0.235294118 0.186046512 0.31372549 43 4 2 45 2L:1699969-1700139 7 chinmo FBtr0307047 1696148 1704682 AGCTTTA 7mer-A1 dme-miR-79-3p 2L + 1699974 1700066 3'utr chinmo FlyBase G836.1 ATGTTTCGCTGTAATCGAAGATGCTATCAAGAAAGCTTTAGTTCTTAGTTCGATTATCGGTTAGCTAGCTAGCTAGTGGCTAAGTGGCACCTA 29 1700011 0.851577693 9 23 183 0.818181818 1.079181246 0.272727273 0.379310345 0.590909091 29 6 2 36 2L:1699974-1700066 7 15 196 FBgn0086758 5795.003333 67.42333333 103.87 0.002588437 0.22247491 0.144411283 -4 -4 -4 0.2 dme-miR-252-5p 7mer-m8 GTACTTA 2L 1701697 1701703 + 2L_1701697_1701703_+ 0.580787822 0.580807138 0.58079748 1.36E-05 chinmo FBtr0307047 1696148 1704682 2L + 1701675 1701712 3'utr chinmo FlyBase G1068.1 AAAGCCCCTCAACAAGCCAATTGTACTTACGATTACTT 32 1701696 0.771457759 2 32 191 1 1.602059991 0 0.21875 0.375 32 0 0 40 2L:1701675-1701712 7 chinmo FBtr0307047 1696148 1704682 GTACTTA 7mer-m8 dme-miR-252-5p 2L + 1701673 1701709 3'utr chinmo FlyBase G844.1 CGAAAGCCCCTCAACAAGCCAATTGTACTTACGATTA 19 1701696 0.783020989 2 18 111 1 1.477121255 0.033333333 0.526315789 0.7 19 0 0 30 2L:1701673-1701709 7 25.5 197 FBgn0086758 5795.003333 67.42333333 103.87 0.004400343 0.378207347 0.245499182 1 1 1 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 2L 1706843 1706849 + 2L_1706843_1706849_+ 0.521220514 0.521220445 0.52122048 7.07E-08 cpb FBtr0331630 1706226 1706962 2L + 1706817 1706869 3'utr cpb FlyBase G1082.1 AAGCAAAATATTAACTGAAATCGCTTTGTGATTGTATTATCTGAGGAAATGCA 20 1706848 0.931265133 7 20 168 1 1.414973348 0.038461538 0.2 0.384615385 20 0 0 26 2L:1706817-1706869 7 cpb FBtr0331630 1706226 1706962 TGTGATT 7mer-m1 dme-miR-308-3p 2L + 1706815 1706867 3'utr cpb FlyBase G857.1 CGAAGCAAAATATTAACTGAAATCGCTTTGTGATTGTATTATCTGAGGAAATG 22 1706848 0.970157702 7 22 179 1 1.544068044 0.057142857 0.454545455 0.657142857 22 0 0 35 2L:1706815-1706867 7 19.5 198 FBgn0011570 1677.946667 128.21 196.5033333 0.011621347 0.15209422 0.099234958 -5 -5 -5 0.2 dme-miR-7-5p 7mer-A1 TCTTCCA 2L 1707615 1707621 - 2L_1707615_1707621_- 0.737451179 0.81800343 0.777727304 0.056959007 CG17660 FBtr0077912 1707130 1707771 2L - 1707542 1707679 3'utr CG17660 FlyBase G6828.2 TAGTTCTATCCGCCATTGAGGAGGAAAACCCCTTATTGCTGCGCTGCGCTGACACTGATCTTCCAATTTCGAGAACCGTCTGTCCGGCCACGCCTTCTGAGCCCGTGTAAAATAATGTATGTAATCGTAGTTCCTTCT 180 1707631 0.801228029 29 162 1080 0.887892377 1.092545208 0.197309417 0.194444444 0.349775785 180 10 15 198 2L:1707542-1707679 7 CG17660 FBtr0077912 1707130 1707771 TCTTCCA 7mer-A1 dme-miR-7-5p 2L - 1707549 1707679 3'utr CG17660 FlyBase G5340.1 TAGTTCTATCCGCCATTGAGGAGGAAAACCCCTTATTGCTGCGCTGCGCTGACACTGATCTTCCAATTTCGAGAACCGTCTGTCCGGCCACGCCTTCTGAGCCCGTGTAAAATAATGTATGTAATCGTAGT 171 1707630 0.780137689 25 148 1006 0.88973384 1.290034611 0.16730038 0.409356725 0.615969582 171 18 11 234 2L:1707549-1707679 7 57 199 FBgn0031356 556.82 28.87 44.32666667 0.102367013 1.974367856 1.285907655 10 9 9.5 0.2 dme-miR-184-3p 6mer2-7 CCGTCC 2L 1711399 1711404 - 2L_1711399_1711404_- 0.977231146 0.929139339 0.953185243 0.034006038 frtz FBtr0333545|FBtr0077911 1711300|1711300 1711751|1711751 2L - 1711337 1711412 3'utr frtz FlyBase G6837.1 AACTATTGCCGTCCCAGTTAGTGCAAAGCTTTAAATAGGAAAGTTTTACTCATAGGTTCTCTATACTCTTTACACA 57 1711406 0.982518515 9 46 376 0.830985915 1.770852012 0.028169014 0.210526316 0.366197183 57 12 0 59 2L:1711337-1711412 6 frtz FBtr0333545|FBtr0077911 1711300|1711300 1711751|1711751 CCGTCC 6mer2-7 dme-miR-184-3p 2L - 1711378 1711412 3'utr frtz FlyBase G5348.2 AACTATTGCCGTCCCAGTTAGTGCAAAGCTTTAAA 38 1711406 0.683313038 6 31 206 0.833333333 0.954242509 0 0.342105263 0.537037037 38 5 4 45 2L:1711378-1711412 6 38.5 200 FBgn0086698 6514.663333 221.8366667 342.0966667 0.005909745 0.173551111 0.112541289 2 2 2 0.2 dme-miR-7-5p 8mer-A1 GTCTTCCA 2L 1711693 1711700 - 2L_1711693_1711700_- 0.675337184 0.674373301 0.674855242 0.00068158 frtz FBtr0333545|FBtr0077911|FBtr0333544 1711300|1711300|1711598 1711751|1711751|1711751 2L - 1711678 1711714 3'utr frtz FlyBase G6838.1 CGGTTAAGCGCTGCGTCTTCCAATCGTTTGTAACTAT 19 1711697 0.630435661 6 16 133 0.80952381 0.929418926 0.380952381 0.105263158 0.19047619 19 3 1 17 2L:1711678-1711714 8 frtz FBtr0333545|FBtr0077911|FBtr0333544 1711300|1711300|1711598 1711751|1711751|1711751 GTCTTCCA 8mer-A1 dme-miR-7-5p 2L - 1711650 1711713 3'utr frtz FlyBase G5349.1 GGTTAAGCGCTGCGTCTTCCAATCGTTTGTAACTATTGTAGTAGGCTGCTCCTTCTACCCTCTT 18 1711697 0.971354525 5 18 111 1 1.322219295 0.238095238 0.111111111 0.238095238 18 0 0 21 2L:1711650-1711713 8 18 201 FBgn0086698 6514.663333 221.8366667 342.0966667 0.002762998 0.081140779 0.052616707 -3 -3 -3 0.2 dme-miR-92b-3p 8mer-m1 GTGCAATT 2L 1711735 1711742 - 2L_1711735_1711742_- 0.596698347 0.59669833 0.596698339 0 frtz FBtr0333545|FBtr0077911|FBtr0333544 1711300|1711300|1711598 1711751|1711751|1711751 2L - 1711717 1711763 stop_codon frtz FlyBase G6839.1 GGCGTGGTCTAATAATTCATAGTGCAATTCCCAGGCGTACACCACAC 25 1711744 0.684334359 4 21 148 0.892857143 1.397940009 0.285714286 0.12 0.214285714 25 3 0 25 2L:1711717-1711763 8 frtz FBtr0333545|FBtr0077911|FBtr0333544 1711300|1711300|1711598 1711751|1711751|1711751 GTGCAATT 8mer-m1 dme-miR-92b-3p 2L - 1711720 1711778 stop_codon frtz FlyBase G5350.1 AAGGTGGTCCACTTCGGCGTGGTCTAATAATTCATAGTGCAATTCCCAGGCGTACACCA 7 1711744 0.802747528 5 7 38 1 1.079181246 0 0.571428571 0.75 7 0 0 12 2L:1711720-1711778 8 14 202 FBgn0086698 6514.663333 221.8366667 342.0966667 0.002148998 0.063109495 0.040924105 2 2 2 0.2 dme-miR-999-3p 6mer3-8 AGTTAA 2L 1716730 1716735 - 2L_1716730_1716735_- 0.968415721 0.998148228 0.983281974 0.021024052 Rim2 FBtr0305618|FBtr0306167 1716242|1716242 1717102|1717102 2L - 1716444 1716877 3'utr Rim2 FlyBase G6845.2 AAGAAAAAACCAATAATGGGAAACACGCACCAGGATCGAAGTGCACCATCCACACCCTAAACCCACTTGCTGCATGCCACAGAAGGATGTGGTATGCCACCGCAGGGCGAAACGTTATCAAAATTTGAAAAGGCTGCTATTTAGTTAAAGTTACAATATATATTGAGTGTATAAATGTGGTTGATACTTGGATAATATAGTGTACATAGGACTCGATTCGCTCAGAGTGCATTGTAAATAGTTAAAGAGTGAGTTCGCTGGCGTAGTTTTCTTAGTTGTAAGCACAAAATGTTGAATCGGCCGCAGTTGCCAGTAGATGCCGCTAAATATATATATATATAGATATAAAGCCGACCGATCCGATTCGTAAACTGTAAAAGTTTCCGTTAAGTTTCCTCAAATGCGATATACGATTTAGTTATCATTACTCTACT 656 1716739 0.997252881 77 585 5290 0.888020833 1.833784375 0.203125 0.149390244 0.2734375 656 77 9 682 2L:1716444-1716877 6 Rim2 FBtr0305618|FBtr0306167 1716242|1716242 1717102|1717102 AGTTAA 6mer3-8 dme-miR-999-3p 2L - 1716503 1716860 3'utr Rim2 FlyBase G5355.2 GGGAAACACGCACCAGGATCGAAGTGCACCATCCACACCCTAAACCCACTTGCTGCATGCCACAGAAGGATGTGGTATGCCACCGCAGGGCGAAACGTTATCAAAATTTGAAAAGGCTGCTATTTAGTTAAAGTTACAATATATATTGAGTGTATAAATGTGGTTGATACTTGGATAATATAGTGTACATAGGACTCGATTCGCTCAGAGTGCATTGTAAATAGTTAAAGAGTGAGTTCGCTGGCGTAGTTTTCTTAGTTGTAAGCACAAAATGTTGAATCGGCCGCAGTTGCCAGTAGATGCCGCTAAATATATATATATATAGATATAAAGCCGACCGATCCGATTCGTAAACTGT 284 1716739 0.989492683 50 255 2137 0.904761905 1.734685557 0.169047619 0.348591549 0.55952381 284 34 6 380 2L:1716503-1716860 6 121.5 203 FBgn0031359 376.9533333 20.33333333 30.89333333 0.322321065 5.975409836 3.932887354 4 4 4 0.2 dme-miR-190-5p 6mer3-8 ACATAT 2L 17367730 17367735 - 2L_17367730_17367735_- 0.967405507 0.966436171 0.966920839 0.000685399 Lrch FBtr0080968|FBtr0080969 17367509|17367509 17368196|17368196 2L - 17367698 17367814 3'utr Lrch FlyBase G11109.1 CACCCATACGAGCGAAATATCGGGCCAAAATTACGACTAGCGATTAGTTGCATATTGAATACTGTTTTAAGTATGAATCACATATGAACATCCAAATATTTAGATATTTATCGAATT 15 17367731 0.970578688 11 14 85 0.9375 0.875061263 0.125 0.066666667 0.125 15 0 1 15 2L:17367698-17367814 6 Lrch FBtr0080968|FBtr0080969 17367509|17367509 17368196|17368196 ACATAT 6mer3-8 dme-miR-190-5p 2L - 17367707 17367746 3'utr Lrch FlyBase G8545.1 AAGTATGAATCACATATGAACATCCAAATATTTAGATATT 7 17367730 0.741111066 3 6 37 1 0.954242509 0.222222222 0.142857143 0.333333333 7 0 0 9 2L:17367707-17367746 6 6.5 204 FBgn0032633 3134.436667 93.34666667 144.12 0.002073738 0.06963291 0.045101304 -4 -5 -4.5 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 17368997 17369003 - 2L_17368997_17369003_- 0.396474421 0.394207466 0.395340943 0.00160294 Lrch FBtr0339797 17368740 17370818 2L - 17368970 17369027 3'utr Lrch FlyBase G11113.1 ATTGAAGGGAAGACAAAGCATTGAGGCAGCTGTAATCAGTCATACATTTTTTATGAAA 156 17369007 0.90037982 5 156 522 1 2.240549248 0.327586207 0.096153846 0.189655172 156 0 0 174 2L:17368970-17369027 7 Lrch FBtr0339797 17368740 17370818 GGCAGCT 7mer-m8 dme-miR-980-3p 2L - 17368983 17369026 3'utr Lrch FlyBase G8549.1 TTGAAGGGAAGACAAAGCATTGAGGCAGCTGTAATCAGTCATAC 102 17369007 0.782052038 4 102 318 1 2.184691431 0.37254902 0.37254902 0.581699346 102 0 0 153 2L:17368983-17369026 7 128.5 205 FBgn0032633 3134.436667 93.34666667 144.12 0.040996202 1.376589059 0.891618096 4 4 4 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 17369156 17369163 - 2L_17369156_17369163_- 0.499652192 0.500070425 0.499861309 0.000295712 Lrch FBtr0339797 17368740 17370818 2L - 17369149 17369183 3'utr Lrch FlyBase G11114.1 ATTAATTTAGGCATACTATTGTACTTAAACGATGA 14 17369164 0.732390734 2 14 116 1 1.146128036 0 0 0 14 0 0 14 2L:17369149-17369183 8 Lrch FBtr0339797 17368740 17370818 GTACTTAA 8mer-A1 dme-miR-252-5p 2L - 17369146 17369181 3'utr Lrch FlyBase G8550.1 TAATTTAGGCATACTATTGTACTTAAACGATGAAAA 11 17369164 0.674633709 4 10 92 0.944444444 1.230448921 0.333333333 0.454545455 0.666666667 11 1 0 17 2L:17369146-17369181 8 12.5 206 FBgn0032633 3134.436667 93.34666667 144.12 0.003987957 0.133909442 0.086733278 1 1 1 0.2 dme-miR-1012-3p 7mer-A1 TGACTAA 2L 17370316 17370322 - 2L_17370316_17370322_- 0.709353063 0.519454264 0.614403663 0.134278729 Lrch FBtr0339797 17368740 17370818 2L - 17370262 17370339 3'utr Lrch FlyBase G11119.1 TATGACTATGATGACTATGACTAATAATGACTGTTTTAATTTAATAGATTTTATAATAATCTCCGGACTAAACATTAA 27 17370306 0.865440668 10 27 230 1 1.602059991 0.1 0.333333333 0.55 27 0 0 40 2L:17370262-17370339 7 Lrch FBtr0339797 17368740 17370818 TGACTAA 7mer-A1 dme-miR-1012-3p 2L - 17370290 17370338 3'utr Lrch FlyBase G8557.1 ATGACTATGATGACTATGACTAATAATGACTGTTTTAATTTAATAGATT 20 17370314 0.713741484 7 18 179 0.933333333 1.447158031 0.1 0.35 0.566666667 20 2 0 28 2L:17370290-17370338 7 21 207 FBgn0032633 3134.436667 93.34666667 144.12 0.006699768 0.224967862 0.145711907 -16 -8 -12 0.2 dme-miR-277-3p 7mer-A1 GCATTTA 2L 17370582 17370588 - 2L_17370582_17370588_- 0.761808463 0.76332373 0.762566096 0.001071408 Lrch FBtr0339797 17368740 17370818 2L - 17370561 17370621 3'utr Lrch FlyBase G11122.1 AAATTCCCCAAAAGACAAGCAGAACACATTGAGGCATTTAATGAGAGGAAACGCAAAGACT 108 17370592 0.760599074 6 99 433 0.949152542 2.049218023 0.025423729 0.074074074 0.152542373 108 6 0 112 2L:17370561-17370621 7 Lrch FBtr0339797 17368740 17370818 GCATTTA 7mer-A1 dme-miR-277-3p 2L - 17370523 17370619 3'utr Lrch FlyBase G8559.1 ATTCCCCAAAAGACAAGCAGAACACATTGAGGCATTTAATGAGAGGAAACGCAAAGACTTCAAATCAATATTTGGCTCCTATTTCTGTATGATTATT 90 17370592 0.951887446 7 86 387 0.969230769 1.62324929 0.084615385 0.377777778 0.569230769 90 2 2 126 2L:17370523-17370619 7 92.5 208 FBgn0032633 3134.436667 93.34666667 144.12 0.029510885 0.990929867 0.641826256 4 4 4 0.2 dme-miR-282-5p 6mer2-7 GAGGCT 2L 17370697 17370702 - 2L_17370697_17370702_- 0.741869328 0.805957355 0.773913342 0.04531713 Lrch FBtr0339797 17368740 17370818 2L - 17370662 17370755 3'utr Lrch FlyBase G11123.2 CAATAGAGTTAAGAGAGCTGCTTTTGCGCTTTTCCACTGGGTAGTGAGTTCTTGAGGCTGCTTTTGTTTACTGCTTAGGATTACGTCCCATATT 232 17370703 0.807255448 19 224 2219 0.971119134 1.65160103 0.472924188 0.159482759 0.296028881 232 3 5 269 2L:17370662-17370755 6 Lrch FBtr0339797 17368740 17370818 GAGGCT 6mer2-7 dme-miR-282-5p 2L - 17370664 17370753 3'utr Lrch FlyBase G8560.1 ATAGAGTTAAGAGAGCTGCTTTTGCGCTTTTCCACTGGGTAGTGAGTTCTTGAGGCTGCTTTTGTTTACTGCTTAGGATTACGTCCCATA 142 17370704 0.988497431 13 141 1330 0.995192308 2.315970345 0.408653846 0.373239437 0.572115385 142 1 0 207 2L:17370664-17370753 6 174.5 209 FBgn0032633 3134.436667 93.34666667 144.12 0.055671886 1.869375803 1.210796558 1 2 1.5 0.2 dme-miR-932-5p 7mer-A1 GAATTGA 2L 17413287 17413293 - 2L_17413287_17413293_- 0.822129831 0.823349553 0.822739692 0.000862529 Dif FBtr0081009|FBtr0081008|FBtr0301578 17413246|17413246|17413246 17413514|17413514|17413514 2L - 17413266 17413379 3'utr Dif FlyBase G11138.1 TTACCGCAATGTACATAAATTTAATGAGGGAAATGCGAATCTCATTGCCCGATGCCTTGTTACGACTTTTCGTTATTGACAAAAGTGAATTGAAAATGATTATTGTTTAAATAA 26 17413290 0.979002354 14 25 172 0.966666667 1.462397998 0.4 0.153846154 0.266666667 26 1 0 29 2L:17413266-17413379 7 Dif FBtr0081008|FBtr0301578|FBtr0081009 17413246|17413246|17413246 17413514|17413514|17413514 GAATTGA 7mer-A1 dme-miR-932-5p 2L - 17413275 17413382 3'utr Dif FlyBase G8572.1 ATTTTACCGCAATGTACATAAATTTAATGAGGGAAATGCGAATCTCATTGCCCGATGCCTTGTTACGACTTTTCGTTATTGACAAAAGTGAATTGAAAATGATTATTG 23 17413319 0.976773326 13 21 142 0.96875 1.190331698 0.21875 0.304347826 0.5 23 0 1 31 2L:17413275-17413382 7 5.5 210 FBgn0011274 1172.133333 42.98333333 65.76666667 0.004692299 0.127956572 0.083628991 -3 26 11.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2L 17415522 17415528 - 2L_17415522_17415528_- 0.660492289 0.660138761 0.660315525 0.000249962 Dif FBtr0301577 17414905 17415684 2L - 17415441 17415566 5'utr Dif FlyBase G11145.1 ACAGCAAAACACACAACTGCACCAACAAATTAAACTTTTCTAGTCGTCTTTTTGTTTCAGTATTAATTATAATGATTACACAAATTTCTAGCTAAGAACCCCTGAGATCGATCGCTCACCAAATTC 218 17415529 0.992561497 18 210 2415 0.955172414 2.141449773 0.044827586 0.252293578 0.437931034 218 12 1 277 2L:17415441-17415566 7 Dif FBtr0301577 17414905 17415684 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2L - 17415486 17415544 5'utr Dif FlyBase G8580.1 CAACAAATTAAACTTTTCTAGTCGTCTTTTTGTTTCAGTATTAATTATAATGATTACAC 167 17415529 0.730211041 15 160 1896 0.954166667 2.359835482 0.016666667 0.317365269 0.525 167 11 0 229 2L:17415486-17415544 7 178.5 211 FBgn0011274 1172.133333 42.98333333 65.76666667 0.152286429 4.152772392 2.714140902 1 1 1 0.2 dme-miR-304-5p 6mer2-7 GAGATT 2L 17438779 17438784 - 2L_17438779_17438784_- 0.782374127 0.835733904 0.809054016 0.037731076 dl FBtr0081007|FBtr0340250 17438644|17438644 17439788|17439788 2L - 17438734 17438816 3'utr dl FlyBase G11164.1 ATGATTAGTCGAAATTATAGTCAAGAAAATGAGAGATTGATTCGAAATCAATATGAAATTTTTGTCGCTTTTCTACTCGTTTA 18 17438780 0.969136251 9 18 106 1 1.322219295 0.142857143 0.111111111 0.238095238 18 0 0 21 2L:17438734-17438816 6 dl FBtr0340250|FBtr0081007 17438644|17438644 17439788|17439788 GAGATT 6mer2-7 dme-miR-304-5p 2L - 17438768 17438815 3'utr dl FlyBase G8592.1 TGATTAGTCGAAATTATAGTCAAGAAAATGAGAGATTGATTCGAAATC 16 17438780 0.78324676 6 16 77 1 1.447158031 0.178571429 0.4375 0.678571429 16 0 0 28 2L:17438768-17438815 6 10 212 FBgn0260632 1797.99 61.25333333 93.53666667 0.005561766 0.163256421 0.106909946 -4 -4 -4 0.2 dme-miR-33-5p 8mer-m1 CAATGCAC 2L 17438894 17438901 - 2L_17438894_17438901_- 0.66183473 0.62742237 0.64462855 0.024333171 dl FBtr0081007|FBtr0340250 17438644|17438644 17439788|17439788 2L - 17438877 17439067 3'utr dl FlyBase G11165.1 TGTTTTGAGATGGATGCTAGACATCTAACTGAATCCTACCTAGTCAAATAGCATCATATATATTTGATGTTTTCTTCGGTATACCAAAGACTACTTAACAAATCATCGCCCCCGATGACGTATTACTCGAATAGACTCTTTTAGAAACTATTAGAAAGCACTCAATCAATGCACAAATCCACTCACCCAGA 281 17438902 0.916373081 31 263 1689 0.949704142 1.904445041 0.159763314 0.170818505 0.310650888 281 14 3 321 2L:17438877-17439067 8 dl FBtr0340250|FBtr0081007 17438644|17438644 17439788|17439788 CAATGCAC 8mer-m1 dme-miR-33-5p 2L - 17438865 17439006 3'utr dl FlyBase G8593.1 ATTTGATGTTTTCTTCGGTATACCAAAGACTACTTAACAAATCATCGCCCCCGATGACGTATTACTCGAATAGACTCTTTTAGAAACTATTAGAAAGCACTCAATCAATGCACAAATCCACTCACCCAGAACACCATGAAAT 157 17438928 0.976044885 19 147 938 0.951020408 2.367355921 0.093877551 0.324840764 0.567346939 157 12 0 233 2L:17438865-17439006 8 51 213 FBgn0260632 1797.99 61.25333333 93.53666667 0.028365008 0.832607749 0.545240726 1 27 14 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 17439328 17439333 - 2L_17439328_17439333_- 0.807591195 0.798634522 0.803112858 0.006333343 dl FBtr0081007|FBtr0340250 17438644|17438644 17439788|17439788 2L - 17439248 17439360 3'utr dl FlyBase G11167.1 AAATTGAAACCGAAAACCCGATCATATGTACCTACAACACGGTGTGTATATTTTGTCTTATAGATCCAGCGCACTTGAGGCGGAAACGTCAGAAGACTGGCGGTGATCCCATG 84 17439334 0.953880843 10 80 370 0.95959596 1.977723605 0.303030303 0.154761905 0.282828283 84 4 0 95 2L:17439248-17439360 6 dl FBtr0340250|FBtr0081007 17438644|17438644 17439788|17439788 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L - 17439313 17439358 3'utr dl FlyBase G8595.1 ATTGAAACCGAAAACCCGATCATATGTACCTACAACACGGTGTGTA 50 17439334 0.958975607 3 47 230 0.962025316 1.880813592 0.240506329 0.44 0.64556962 50 3 0 76 2L:17439313-17439358 6 60 214 FBgn0260632 1797.99 61.25333333 93.53666667 0.033370597 0.979538529 0.641459677 1 1 1 0.2 dme-miR-283-5p 7mer-m8 TGATATT 2L 17461215 17461221 - 2L_17461215_17461221_- 0.614505096 0.6202022 0.617353648 0.004028458 BicD FBtr0081002|FBtr0330225|FBtr0330226 17460815|17459603|17460815 17461725|17461725|17461665 2L - 17461198 17461240 3'utr BicD FlyBase G11189.1 GATGTTGAACAGATGGTATTGATATTGGCAACTGAAACATGCA 9 17461215 0.836989282 4 9 57 1 1.041392685 0.272727273 0.222222222 0.363636364 9 0 0 11 2L:17461198-17461240 7 BicD FBtr0081002|FBtr0330225|FBtr0330226 17460815|17459603|17460815 17461725|17461725|17461665 TGATATT 7mer-m8 dme-miR-283-5p 2L - 17461203 17461248 3'utr BicD FlyBase G8608.1 CACAAATTGATGTTGAACAGATGGTATTGATATTGGCAACTGAAAC 7 17461226 0.782233352 5 7 49 1 1.176091259 0 0.714285714 0.866666667 7 0 0 15 2L:17461203-17461248 7 6.5 215 FBgn0000183 544.58 15.32 23.58666667 0.011935804 0.424281984 0.275579423 -6 5 -0.5 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 2L 17461499 17461504 - 2L_17461499_17461504_- 0.940578894 0.952842194 0.946710544 0.008671463 BicD FBtr0081002|FBtr0330225|FBtr0305688|FBtr0330226 17460815|17459603|17461396|17460815 17461725|17461725|17462145|17461665 2L - 17461430 17461674 stop_codon BicD FlyBase G11191.1 AAGTTGTAAAGTCGTTGGAGTTCCTGCGGAAATGAGAGATTCCCAAAACCACATGATATACTGCGAACGTATTTGAGAACGAAGCTATATCCCAGCTGTATCCAACTACTATAACTATGTTTGTTTGTATTGTACTTGTATTTATTGAAAGTTTAGTTAGATGAAAGTTTTGTGTTAGGCAAGGGAGCAACAAACGGTTATTAACGGTTAGTTACTTAAACGTCCATTTAATTTAATTAAAAACA 159 17461505 0.943649442 31 154 1175 0.972677596 1.949390007 0.169398907 0.144654088 0.256830601 159 4 1 178 2L:17461430-17461674 6 BicD FBtr0081002|FBtr0330225|FBtr0305688|FBtr0330226 17460815|17459603|17461396|17460815 17461725|17461725|17462145|17461665 TGTGTT 6mer3-8 dme-miR-317-3p 2L - 17461431 17461525 3'utr BicD FlyBase G8609.1 AGTTTAGTTAGATGAAAGTTTTGTGTTAGGCAAGGGAGCAACAAACGGTTATTAACGGTTAGTTACTTAAACGTCCATTTAATTTAATTAAAAAC 72 17461505 0.756518576 14 68 614 0.944954128 2.012837225 0.247706422 0.416666667 0.614678899 72 6 0 103 2L:17461431-17461525 6 44.5 216 FBgn0000183 544.58 15.32 23.58666667 0.081714349 2.904699739 1.886659129 1 1 1 0.2 dme-miR-283-5p 6mer3-8 TGATAT 2L 17461616 17461621 - 2L_17461616_17461621_- 0.695781119 0.759273898 0.727527508 0.044896189 BicD FBtr0081002|FBtr0330225|FBtr0305688|FBtr0330226 17460815|17459603|17461396|17460815 17461725|17461725|17462145|17461665 2L - 17461430 17461674 stop_codon BicD FlyBase G11191.1 AAGTTGTAAAGTCGTTGGAGTTCCTGCGGAAATGAGAGATTCCCAAAACCACATGATATACTGCGAACGTATTTGAGAACGAAGCTATATCCCAGCTGTATCCAACTACTATAACTATGTTTGTTTGTATTGTACTTGTATTTATTGAAAGTTTAGTTAGATGAAAGTTTTGTGTTAGGCAAGGGAGCAACAAACGGTTATTAACGGTTAGTTACTTAAACGTCCATTTAATTTAATTAAAAACA 159 17461621 0.943649442 31 154 1175 0.972677596 1.949390007 0.169398907 0.144654088 0.256830601 159 4 1 178 2L:17461430-17461674 6 BicD FBtr0081002|FBtr0330225|FBtr0305688|FBtr0330226 17460815|17459603|17461396|17460815 17461725|17461725|17462145|17461665 TGATAT 6mer3-8 dme-miR-283-5p 2L - 17461593 17461651 3'utr BicD FlyBase G8610.1 CTGCGGAAATGAGAGATTCCCAAAACCACATGATATACTGCGAACGTATTTGAGAACGA 25 17461621 0.888477998 7 25 101 1 1.602059991 0.175 0.44 0.65 25 0 0 40 2L:17461593-17461651 6 35 217 FBgn0000183 544.58 15.32 23.58666667 0.064269712 2.2845953 1.483889203 0 0 0 0.2 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 2L 17475521 17475526 - 2L_17475521_17475526_- 0.999999841 0.999873647 0.999936744 8.92E-05 Aac11 FBtr0081001 17474910 17475587 2L - 17475510 17475548 3'utr Aac11 FlyBase G11207.1 ACTTCACTTGAATGGTTTGTCCCTAGTCCGTAGACATAC 7 17475518 0.975400187 5 7 52 1 0.954242509 0.444444444 0.142857143 0.333333333 7 0 0 9 2L:17475510-17475548 6 Aac11 FBtr0081001 17474910 17475587 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 2L - 17475511 17475540 3'utr Aac11 FlyBase G8624.1 TGAATGGTTTGTCCCTAGTCCGTAGACATA 11 17475532 0.55876014 6 10 80 0.956521739 1.342422681 0.173913043 0.636363636 0.826086957 11 1 0 22 2L:17475511-17475540 6 9 218 FBgn0027885 2398.67 116.9633333 177.4933333 0.003752079 0.076947191 0.05070613 -8 6 -1 0.2 dme-bantam-3p 8mer-A1 TGATCTCA 2L 17481931 17481938 + 2L_17481931_17481938_+ 0.626464828 0.627217321 0.626841075 0.000532098 CG5110 FBtr0306162 17481785 17482037 2L + 17481886 17481965 3'utr CG5110 FlyBase G5034.1 CACCATTGTACTATTCCGGGAATTTATTTCATATCCTGCGAAGGGTGATCTCAAAGATGAACAAAGTTCCGAGTCCTCCG 38 17481931 0.978760997 7 34 229 0.931818182 1.311753861 0.454545455 0.157894737 0.272727273 38 2 1 41 2L:17481886-17481965 8 CG5110 FBtr0306162 17481785 17482037 TGATCTCA 8mer-A1 dme-bantam-3p 2L + 17481890 17481944 3'utr CG5110 FlyBase G3918.1 ATTGTACTATTCCGGGAATTTATTTCATATCCTGCGAAGGGTGATCTCAAAGATG 19 17481931 0.971694183 6 18 109 0.962962963 1.414973348 0.518518519 0.368421053 0.555555556 19 1 0 26 2L:17481890-17481944 8 25.5 219 FBgn0032642 238.3333333 55.84666667 85.14666667 0.106993007 0.456607377 0.299483245 0 0 0 0.2 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 2L 17973602 17973608 + 2L_17973602_17973608_+ 0.615765452 0.619933713 0.617849582 0.002947362 CG5674 FBtr0290267|FBtr0081021|FBtr0340182|FBtr0081022 17973392|17973392|17973392|17972122 17974868|17974868|17974868|17974868 2L + 17973591 17973619 3'utr CG5674 FlyBase G5044.1 AGAGAGCTATGTGGTGCTGAAAATGCAAT 6 17973602 0.682697517 2 6 28 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2L:17973591-17973619 7 CG5674 FBtr0340182|FBtr0081022|FBtr0290267|FBtr0081021 17973392|17972122|17973392|17973392 17974868|17974868|17974868|17974868 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 2L + 17973587 17973616 3'utr CG5674 FlyBase G3923.1 AAGCAGAGAGCTATGTGGTGCTGAAAATGC 5 17973602 0.938693162 3 4 24 1 0.84509804 0.285714286 0.2 0.428571429 5 0 0 7 2L:17973587-17973616 7 5.5 220 FBgn0032656 133.77 5.08 7.833333333 0.041115347 1.082677165 0.70212766 0 0 0 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 17974325 17974331 + 2L_17974325_17974331_+ 0.617215101 0.599673981 0.608444541 0.012403431 CG5674 FBtr0290267|FBtr0290267|FBtr0290267|FBtr0081021|FBtr0081021|FBtr0081021|FBtr0340182|FBtr0340182|FBtr0340182|FBtr0081022|FBtr0081022|FBtr0081022 17973392|17973392|17973392|17973392|17973392|17973392|17973392|17973392|17973392|17972122|17972122|17972122 17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868 2L + 17974295 17974344 3'utr CG5674 FlyBase G5045.1 TTATTTTGTATCTTTGGACTAAAAACACATTGTGATAAAATGCACCATGA 101 17974324 0.830697806 5 93 569 0.93495935 1.28254659 0.154471545 0.188118812 0.333333333 101 3 5 115 2L:17974295-17974344 7 CG5674 FBtr0340182|FBtr0340182|FBtr0340182|FBtr0081022|FBtr0081022|FBtr0081022|FBtr0290267|FBtr0290267|FBtr0290267|FBtr0081021|FBtr0081021|FBtr0081021 17973392|17973392|17973392|17972122|17972122|17972122|17973392|17973392|17973392|17973392|17973392|17973392 17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 17974288 17974353 3'utr CG5674 FlyBase G3924.1 AAATAGTTTATTTTGTATCTTTGGACTAAAAACACATTGTGATAAAATGCACCATGAGCTTTAGAG 75 17974324 0.810359648 6 72 415 0.971962617 1.414973348 0.186915888 0.32 0.523364486 75 0 3 104 2L:17974288-17974353 7 71.5 221 FBgn0032656 133.77 5.08 7.833333333 0.534499514 14.07480315 9.127659574 1 1 1 0.2 dme-miR-304-5p 7mer-m8 TGAGATT 2L 18129026 18129032 + 2L_18129026_18129032_+ 0.619709971 0.62020067 0.61995532 0.000346977 CG5758 FBtr0081037|FBtr0340577|FBtr0340575|FBtr0081036|FBtr0081035|FBtr0340576 18128943|18128943|18128943|18128943|18128943|18128943 18129862|18129862|18129862|18129862|18129862|18129862 2L + 18128986 18129128 3'utr CG5758 FlyBase G5059.1 TATCGCGATGGTAAATGCGAAAATAACACAGGCGGCACTTTGAGATTGTTTTTGGGATCCCTCAATCGGCCTTCGAGTCTTGTATCAGTCTATTTCCGAAGTAGGAGACATTCCAGGCCCTTCGACAATTAGTCTATTGTCGC 39 18129025 0.978304154 14 39 258 1 1.681241237 0.0625 0.179487179 0.333333333 39 0 0 48 2L:18128986-18129128 7 CG5758 FBtr0081035|FBtr0340576|FBtr0340575|FBtr0081036|FBtr0081037|FBtr0340577 18128943|18128943|18128943|18128943|18128943|18128943 18129862|18129862|18129862|18129862|18129862|18129862 TGAGATT 7mer-m8 dme-miR-304-5p 2L + 18129013 18129071 3'utr CG5758 FlyBase G3934.1 ACAGGCGGCACTTTGAGATTGTTTTTGGGATCCCTCAATCGGCCTTCGAGTCTTGTATC 9 18129025 0.954842385 7 9 67 1 1.146128036 0 0.444444444 0.642857143 9 0 0 14 2L:18129013-18129071 7 11 222 FBgn0032666 5 0.196666667 0.306666667 2.2 55.93220339 35.86956522 1 1 1 0.2 dme-miR-305-5p 6mer2-7 GTACAA 2L 18130050 18130055 - 2L_18130050_18130055_- 0.642185638 0.664456005 0.653320821 0.015747551 kel FBtr0081043|FBtr0081042 18129882|18129882 18130773|18133613 2L - 18130035 18130158 3'utr kel FlyBase G11245.1 ACTCAAATTTCCATTACCCCATGGCATTTGGCACATGGACCGCTTCGTTTCAGTATGTTAAGTTATGGCTTTAAACCGGAACAATAATATTTAGCCAACTATTGTACAAGCTCTCCACTAGAAT 48 18130057 0.975265359 11 47 299 1 1.716003344 0.057692308 0.083333333 0.153846154 48 0 0 52 2L:18130035-18130158 6 kel FBtr0081043|FBtr0081042 18129882|18129882 18130773|18133613 GTACAA 6mer2-7 dme-miR-305-5p 2L - 18130013 18130097 3'utr kel FlyBase G8649.1 GTTATGGCTTTAAACCGGAACAATAATATTTAGCCAACTATTGTACAAGCTCTCCACTAGAATCCTATTGTTTAAGTCAATTAGA 28 18130057 0.976181702 5 26 159 0.921568627 1.672097858 0.137254902 0.5 0.725490196 28 4 0 47 2L:18130013-18130097 6 29.5 223 FBgn0001301 597.3333333 13.11666667 20.1 0.049386161 2.249047014 1.467661692 2 2 2 0.2 dme-bantam-3p 7mer-A1 GATCTCA 2L 18130470 18130476 - 2L_18130470_18130476_- 0.821796073 0.821987004 0.821891538 0.000134987 kel FBtr0081043|FBtr0081042 18129882|18129882 18130773|18133613 2L - 18130442 18130507 3'utr kel FlyBase G11247.1 TTTCTAATTACAACGCTGCTCTACAAAATTGGATCTCAAAACAATACAAGCATAACGAATCGACCA 383 18130478 0.984834489 5 375 3033 0.976905312 2.325310372 0.018475751 0.104438642 0.207852194 383 9 1 423 2L:18130442-18130507 7 kel FBtr0081043|FBtr0081042 18129882|18129882 18130773|18133613 GATCTCA 7mer-A1 dme-bantam-3p 2L - 18130442 18130506 3'utr kel FlyBase G8652.1 TTCTAATTACAACGCTGCTCTACAAAATTGGATCTCAAAACAATACAAGCATAACGAATCGACCA 192 18130478 0.951201856 8 184 1509 0.957692308 2.396199347 0.034615385 0.270833333 0.461538462 192 11 0 249 2L:18130442-18130506 7 280 224 FBgn0001301 597.3333333 13.11666667 20.1 0.46875 21.34688691 13.93034826 2 2 2 0.2 dme-miR-184-5p 6mer3-8 TGATAA 2L 18130853 18130858 - 2L_18130853_18130858_- 0.84693795 0.971394357 0.909166154 0.088003964 kel FBtr0081042 18129882 18133613 2L - 18130798 18130877 3'utr kel FlyBase G11249.1 TAGATCCTGTCAGCTTAAGTGATAACGAGACTGAGACAACCAGCAGTCAAAACAACCTTCCAAGCACTACCAACAGCAAT 28 18130861 0.931365828 7 25 126 0.911764706 1.190331698 0.029411765 0.214285714 0.352941176 28 2 1 31 2L:18130798-18130877 6 kel FBtr0081042 18129882 18133613 TGATAA 6mer3-8 dme-miR-184-5p 2L - 18130831 18130876 3'utr kel FlyBase G8655.1 AGATCCTGTCAGCTTAAGTGATAACGAGACTGAGACAACCAGCAGT 15 18130862 0.958700917 5 14 69 0.884615385 1.361727836 0.115384615 0.4 0.653846154 15 3 0 23 2L:18130831-18130876 6 19.5 225 FBgn0001301 597.3333333 13.11666667 20.1 0.032645089 1.486658196 0.970149254 3 4 3.5 0.2 dme-miR-252-5p 6mer3-8 GTACTT 2L 18532142 18532147 - 2L_18532142_18532147_- 0.802203573 0.890991107 0.84659734 0.062782243 Pde11 FBtr0303163|FBtr0343830 18532023|18532023 18534130|18533334 2L - 18532120 18532171 3'utr Pde11 FlyBase G11321.1 TGTAATCCTTCTTTAGACTAGATTGTACTTTGTGAGTTTTGTTATTTATTGT 8 18532159 0.795966705 4 8 101 1 1 0 0.25 0.4 8 0 0 10 2L:18532120-18532171 6 Pde11 FBtr0343830|FBtr0303163 18532023|18532023 18533334|18534130 GTACTT 6mer3-8 dme-miR-252-5p 2L - 18532125 18532168 3'utr Pde11 FlyBase G8708.1 AATCCTTCTTTAGACTAGATTGTACTTTGTGAGTTTTGTTATTT 11 18532159 0.762208606 5 9 116 0.857142857 0.77815125 0.142857143 0.272727273 0.428571429 11 1 1 12 2L:18532125-18532168 6 8.5 226 FBgn0085370 2569.533333 47.93666667 73.66666667 0.003307994 0.177317294 0.115384615 12 12 12 0.2 dme-bantam-3p 6mer3-8 TGATCT 2L 18532881 18532886 - 2L_18532881_18532886_- 0.996685133 0.99922639 0.997955762 0.00179697 Pde11 FBtr0303162|FBtr0303163|FBtr0343830|FBtr0112544|FBtr0343831|FBtr0112545 18532726|18532023|18532023|18532726|18532726|18532726 18534130|18534130|18533334|18533334|18533334|18533334 2L - 18532857 18532899 3'utr Pde11 FlyBase G11326.1 TATGTGTATATTCTGATCTGTGTGTGTTTGTAACTTAAATTTT 14 18532886 0.735108972 5 10 164 0.6875 0.740362689 0.5 0.142857143 0.25 14 4 1 11 2L:18532857-18532899 6 Pde11 FBtr0112545|FBtr0343831|FBtr0112544|FBtr0343830|FBtr0303163|FBtr0303162 18532726|18532726|18532726|18532023|18532023|18532726 18533334|18533334|18533334|18533334|18534130|18534130 TGATCT 6mer3-8 dme-bantam-3p 2L - 18532869 18532900 3'utr Pde11 FlyBase G8711.1 GTATGTGTATATTCTGATCTGTGTGTGTTTGT 12 18532886 0.761587683 4 8 122 0.928571429 1.113943352 0.642857143 0.083333333 0.214285714 12 1 0 13 2L:18532869-18532900 6 11 227 FBgn0085370 2569.533333 47.93666667 73.66666667 0.004280933 0.229469439 0.149321267 0 0 0 0.2 dme-miR-11-3p 7mer-m1 TGTGATG 2L 18533243 18533249 - 2L_18533243_18533249_- 0.460383617 0.507886782 0.4841352 0.033589835 Pde11 FBtr0303162|FBtr0303163|FBtr0343830|FBtr0112544|FBtr0343831|FBtr0112545 18532726|18532023|18532023|18532726|18532726|18532726 18534130|18534130|18533334|18533334|18533334|18533334 2L - 18533222 18533277 3'utr Pde11 FlyBase G11329.1 TTTAACATGATAACTCTTAAACCACATATGTGATGCCTAAAAGTATGCAAGAAATC 11 18533251 0.977564917 3 10 60 0.857142857 1.079181246 0.071428571 0.272727273 0.428571429 11 2 0 12 2L:18533222-18533277 7 Pde11 FBtr0112545|FBtr0343831|FBtr0112544|FBtr0343830|FBtr0303163|FBtr0303162 18532726|18532726|18532726|18532023|18532023|18532726 18533334|18533334|18533334|18533334|18534130|18534130 TGTGATG 7mer-m1 dme-miR-11-3p 2L - 18533234 18533331 3'utr Pde11 FlyBase G8713.1 CATCCCAATCTGGTGTGTTCCTAGAAACTCGGAAACAGATTAAAGGGGATCATATTTAACATGATAACTCTTAAACCACATATGTGATGCCTAAAAGT 15 18533251 0.848829717 7 14 93 0.961538462 1.397940009 0 0.333333333 0.615384615 15 1 0 25 2L:18533234-18533331 7 7.5 228 FBgn0085370 2569.533333 47.93666667 73.66666667 0.002918818 0.156456436 0.101809955 2 2 2 0.2 dme-miR-14-3p 6mer3-8 AAGACT 2L 18599774 18599779 - 2L_18599774_18599779_- 0.942302977 0.999739389 0.971021183 0.040613668 CG10413 FBtr0081080|FBtr0343829 18599753|18599753 18600609|18600609 2L - 18599754 18599910 3'utr CG10413 FlyBase G11351.1 GGACGGACATTGATCGATTGTCGTAGACAAGTGTTTTGTGTGTGTAAACTTTATGGAACTGTGACCTAGCTAATAATATAATAATTGATCACAGCATTCATTGTAATCGGTTCTTTCCAATATTTTAAATAAAGACTTAGCGATATGTATTTATGTA 32 18599774 0.966256522 15 31 251 0.974358974 1.579783597 0.051282051 0.15625 0.307692308 32 1 0 38 2L:18599754-18599910 6 CG10413 FBtr0343829|FBtr0081080 18599753|18599753 18600609|18600609 AAGACT 6mer3-8 dme-miR-14-3p 2L - 18599759 18599824 3'utr CG10413 FlyBase G8729.1 GATCACAGCATTCATTGTAATCGGTTCTTTCCAATATTTTAAATAAAGACTTAGCGATATGTATTT 15 18599774 0.831795305 6 14 128 1 1.322219295 0.095238095 0.266666667 0.476190476 15 0 0 21 2L:18599759-18599824 6 13 229 FBgn0032689 528.2066667 16.84 25.75 0.024611579 0.771971496 0.504854369 -5 -5 -5 0.2 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 18599962 18599967 - 2L_18599962_18599967_- 0.998595934 0.996530303 0.997563119 0.0014606 CG10413 FBtr0081080|FBtr0343829 18599753|18599753 18600609|18600609 2L - 18599921 18599982 3'utr CG10413 FlyBase G11352.1 TTGTGGTTGTAAAATTGATGATTTCATATTGCACTTAGTTTGTAATCCATTTTTGGAAGACC 13 18599943 0.991598997 8 12 138 0.928571429 1.113943352 0.071428571 0.076923077 0.142857143 13 1 0 13 2L:18599921-18599982 6 CG10413 FBtr0343829|FBtr0081080 18599753|18599753 18600609|18600609 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L - 18599888 18599974 3'utr CG10413 FlyBase G8731.1 GTAAAATTGATGATTTCATATTGCACTTAGTTTGTAATCCATTTTTGGAAGACCTTCACAGCTCGGACGGACATTGATCGATTGTCG 10 18599964 0.994864959 6 8 90 0.866666667 1.113943352 0.266666667 0.3 0.533333333 10 2 0 13 2L:18599888-18599974 6 6 230 FBgn0032689 528.2066667 16.84 25.75 0.01135919 0.356294537 0.233009709 -24 -3 -13.5 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 2L 18600059 18600065 - 2L_18600059_18600065_- 0.521216588 0.520504018 0.520860303 0.000503884 CG10413 FBtr0081080|FBtr0343829 18599753|18599753 18600609|18600609 2L - 18600045 18600080 3'utr CG10413 FlyBase G11353.1 CGATATTAACCTCTTTGTGATTGATTATGAATATCT 24 18600066 0.621603319 4 22 235 0.911764706 0.889301703 0.058823529 0.291666667 0.5 24 0 3 31 2L:18600045-18600080 7 CG10413 FBtr0343829|FBtr0081080 18599753|18599753 18600609|18600609 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 18600045 18600094 3'utr CG10413 FlyBase G8732.1 AACGGAACTCACACCGATATTAACCTCTTTGTGATTGATTATGAATATCT 19 18600066 0.991504092 5 17 187 0.869565217 0.698970004 0 0.210526316 0.347826087 19 0 3 20 2L:18600045-18600094 7 21 231 FBgn0032689 528.2066667 16.84 25.75 0.039757166 1.247030879 0.815533981 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 18661256 18661263 + 2L_18661256_18661263_+ 0.648640981 0.649297776 0.648969378 0.000464428 MESR3 FBtr0343808|FBtr0343808|FBtr0343808|FBtr0329971|FBtr0329971|FBtr0329971|FBtr0329972|FBtr0329972|FBtr0329972|FBtr0081073|FBtr0081073|FBtr0081073 18661050|18661050|18661050|18661104|18661104|18661104|18661050|18661050|18661050|18661050|18661050|18661050 18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776 2L + 18661020 18661494 stop_codon MESR3 FlyBase G5088.1 TCGGACCCCCCAATCCCCAGCAGCATCGTTGAGTAGGGTCGGGCGCGTGGATCTGGAACACGAGCGCCCTATGGTGGCAGAACTGAATCTGCCTCGAAGCCACAACCCAACACAACCACGAAGAAATCCAGGAAAAACCAACCCTTAGTTCGTATGGCTAGTTATAGATCCATTTGTTATAGGCCTAAGTTATGCCAATGTGCGATCCGAGTGCGGAACTCGGCCAACACATTTATCTGTGATACGATTTAGGCGTCTTTACTTTAGAGAGGGATACTGATAACACAATTTGATAAAGAACATTTTTAAACGAAGAACATAGCAAATGAAGCGAGAGTTTTTGCAAGTTATTAAAACATATTAAGCGATTAACGTTTGTCGATAAGCAAGTTTTTTGTAAAACCTTTTCTAATATCACACATATACCCTTATGCATAATTATATTCGTACCATATAGTCCTGATATCTATCGAGT 1283 18661255 0.98555517 81 1160 9566 0.906088083 1.730844367 0.305051813 0.163678878 0.305051813 1283 120 25 1399 2L:18661020-18661494 8 MESR3 FBtr0081073|FBtr0081073|FBtr0081073|FBtr0329972|FBtr0329972|FBtr0329972|FBtr0329971|FBtr0329971|FBtr0329971|FBtr0343808|FBtr0343808|FBtr0343808 18661050|18661050|18661050|18661050|18661050|18661050|18661104|18661104|18661104|18661050|18661050|18661050 18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 18661173 18661408 3'utr MESR3 FlyBase G3962.2 ATGGCTAGTTATAGATCCATTTGTTATAGGCCTAAGTTATGCCAATGTGCGATCCGAGTGCGGAACTCGGCCAACACATTTATCTGTGATACGATTTAGGCGTCTTTACTTTAGAGAGGGATACTGATAACACAATTTGATAAAGAACATTTTTAAACGAAGAACATAGCAAATGAAGCGAGAGTTTTTGCAAGTTATTAAAACATATTAAGCGATTAACGTTTGTCGATAAGCAA 766 18661255 0.96837547 45 670 5377 0.886054422 1.762595214 0.308673469 0.392950392 0.604591837 766 117 17 1042 2L:18661173-18661408 8 589.5 232 FBgn0032694 1795.86 104.38 160.0933333 0.328254986 5.647633646 3.682227034 1 1 1 0.2 dme-miR-92b-3p 6mer3-8 GTGCAA 2L 18661728 18661733 + 2L_18661728_18661733_+ 0.999999448 1 0.999999724 4.24E-07 MESR3 FBtr0343808|FBtr0329971|FBtr0329972|FBtr0081073 18661050|18661104|18661050|18661050 18661776|18661776|18661776|18661776 2L + 18661629 18661772 3'utr MESR3 FlyBase G5090.1 ACATAAATATATATGCTATATTACACCTATCTATATATTATATATAGCTCTAAGCATTACATCATAGCCACTTGTCTGTATGAACTTCATATTTTGCCTGTGCAAAACAATCGCGAGAATCAAATAAAGCTGACAAAGAGAGCC 39 18661701 0.983022018 21 33 287 0.860465116 1.091080469 0.069767442 0.102564103 0.186046512 39 4 2 37 2L:18661629-18661772 6 MESR3 FBtr0081073|FBtr0329972|FBtr0329971|FBtr0343808 18661050|18661050|18661104|18661050 18661776|18661776|18661776|18661776 GTGCAA 6mer3-8 dme-miR-92b-3p 2L + 18661687 18661774 3'utr MESR3 FlyBase G3965.1 ACATCATAGCCACTTGTCTGTATGAACTTCATATTTTGCCTGTGCAAAACAATCGCGAGAATCAAATAAAGCTGACAAAGAGAGCCAA 15 18661704 0.982719571 8 13 102 0.846153846 1.342422681 0.076923077 0.466666667 0.692307692 15 4 0 22 2L:18661687-18661774 6 8 233 FBgn0032694 1795.86 104.38 160.0933333 0.00445469 0.076643035 0.04997085 27 24 25.5 0.2 dme-miR-79-3p 7mer-A1 AGCTTTA 2L 18684620 18684626 - 2L_18684620_18684626_- 0.81211843 0.778525559 0.795321994 0.023753697 msl-1 FBtr0081130 18683718 18685245 2L - 18684561 18684647 3'utr msl-1 FlyBase G11388.1 TTAGATTGGTTAACTCATCTCAGCTTTATCACCTTTAAAATCGCCCGCACTAAAGTGATAAGAACACGAAAGATATTCACATAAGTT 35 18684628 0.991579344 4 30 316 0.780487805 1.204119983 0.073170732 0.085714286 0.219512195 35 8 1 32 2L:18684561-18684647 7 msl-1 FBtr0081130 18683718 18685245 AGCTTTA 7mer-A1 dme-miR-79-3p 2L - 18684600 18684664 3'utr msl-1 FlyBase G8752.1 TCAAACCAGTCGCTTAGTTAGATTGGTTAACTCATCTCAGCTTTATCACCTTTAAAATCGCCCGC 23 18684630 0.990693712 6 20 213 0.9375 1.176091259 0.1875 0.260869565 0.46875 23 1 1 30 2L:18684600-18684664 7 26.5 234 FBgn0005617 2040.813333 60.53666667 92.9 0.012985019 0.437751225 0.28525296 2 4 3 0.2 dme-miR-2a-2-5p 7mer-A1 GATGAGA 2L 18684905 18684911 - 2L_18684905_18684911_- 0.689211066 0.668548544 0.678879805 0.014610665 msl-1 FBtr0081130 18683718 18685245 2L - 18684860 18684924 3'utr msl-1 FlyBase G11390.1 TCGTTTCTTATGCGATGAGAGATCTTAAAAGGCAAGTAAATTGAGCTGTCCTATTCAAACATTTT 7 18684914 0.988381823 5 6 51 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 2L:18684860-18684924 7 msl-1 FBtr0081130 18683718 18685245 GATGAGA 7mer-A1 dme-miR-2a-2-5p 2L - 18684891 18684931 3'utr msl-1 FlyBase G8753.1 AGTTTTGTCGTTTCTTATGCGATGAGAGATCTTAAAAGGCA 7 18684914 0.812968305 3 7 57 1 1.041392685 0.090909091 0.285714286 0.545454545 7 0 0 11 2L:18684891-18684931 7 4.5 235 FBgn0005617 2040.813333 60.53666667 92.9 0.002205003 0.074335114 0.048439182 3 3 3 0.2 dme-miR-14-3p 7mer-m8 AAGACTG 2L 18685199 18685205 - 2L_18685199_18685205_- 0.439278865 0.652816635 0.54604775 0.150993956 msl-1 FBtr0081130|FBtr0343118 18683718|18684982 18685245|18685245 2L - 18685175 18685243 3'utr msl-1 FlyBase G11392.1 AGGAAACGCCTGGGGGATCTGATACTGGAGCTAAGCAGAAGACTGTCGGTTGGGGGAAGTCGTTGCGTT 20 18685195 0.714050345 7 16 96 0.772727273 0.753327667 0.136363636 0.1 0.181818182 20 3 2 17 2L:18685175-18685243 7 msl-1 FBtr0343118|FBtr0081130 18684982|18683718 18685245|18685245 AAGACTG 7mer-m8 dme-miR-14-3p 2L - 18685179 18685237 3'utr msl-1 FlyBase G8755.1 CGCCTGGGGGATCTGATACTGGAGCTAAGCAGAAGACTGTCGGTTGGGGGAAGTCGTTG 17 18685196 0.974253973 7 12 75 0.7 1.146128036 0.1 0.176470588 0.3 17 6 0 14 2L:18685179-18685237 7 13 236 FBgn0005617 2040.813333 60.53666667 92.9 0.006370009 0.214745884 0.139935414 -10 -9 -9.5 0.2 dme-miR-283-5p 8mer-A1 TGATATTA 2L 18698010 18698017 + 2L_18698010_18698017_+ 0.540602274 0.542732352 0.541667313 0.001506208 CG10338 FBtr0343108|FBtr0081096 18697884|18697884 18698571|18698571 2L + 18697947 18698031 3'utr CG10338 FlyBase G5103.1 AATTTCATTAGACTTCATTATCATTCTCACATATCTCACATGGCTACCATAGAGCGAAAACATTGATATTAACTAAGTGCTATTG 16 18698009 0.897352355 4 16 108 1 1.255272505 0.222222222 0.125 0.222222222 16 0 0 18 2L:18697947-18698031 8 CG10338 FBtr0081096|FBtr0343108 18697884|18697884 18698571|18698571 TGATATTA 8mer-A1 dme-miR-283-5p 2L + 18697977 18698020 3'utr CG10338 FlyBase G3975.1 ATATCTCACATGGCTACCATAGAGCGAAAACATTGATATTAACT 8 18698009 0.968120893 2 7 41 0.928571429 1.113943352 0 0.5 0.714285714 8 1 0 13 2L:18697977-18698020 8 8.5 237 FBgn0032700 302.7966667 15.66333333 24.19 0.028071643 0.542668653 0.35138487 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 18701315 18701321 - 2L_18701315_18701321_- 0.754178705 0.754103991 0.754141348 5.28E-05 CG10376 FBtr0081128|FBtr0081128|FBtr0081128 18700604|18700604|18700604 18701626|18701626|18701626 2L - 18701307 18701334 3'utr CG10376 FlyBase G11433.1 CGCAATCGTTTAATGTGATACAACGAAA 6 18701322 0.680065494 5 6 35 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2L:18701307-18701334 7 CG10376 FBtr0081128|FBtr0081128|FBtr0081128 18700604|18700604|18700604 18701626|18701626|18701626 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 18701309 18701368 3'utr CG10376 FlyBase G8783.1 ATATAATCCATTTTCTAAAAGATTATTGAACGTACGCAATCGTTTAATGTGATACAACGA 5 18701322 0.977643299 4 5 39 1 0.698970004 0 0 0 5 0 0 5 2L:18701309-18701368 7 4.5 238 FBgn0032702 2337.326667 113.6933333 174.6866667 0.001925276 0.039580157 0.025760409 1 1 1 0.2 dme-miR-305-5p 7mer-A1 GTACAAA 2L 18701559 18701565 - 2L_18701559_18701565_- 0.782896661 0.779817 0.78135683 0.002177677 CG10376 FBtr0081128 18700604 18701626 2L - 18701546 18701587 3'utr CG10376 FlyBase G11434.1 CGCCTTGGGATGGGTTAATTTTGTACAAATTCAAAGCAACTT 10 18701568 0.925135535 5 8 87 0.923076923 0.77815125 0.076923077 0.2 0.384615385 10 0 1 12 2L:18701546-18701587 7 CG10376 FBtr0081128 18700604 18701626 GTACAAA 7mer-A1 dme-miR-305-5p 2L - 18701555 18701591 3'utr CG10376 FlyBase G8784.1 TACCCGCCTTGGGATGGGTTAATTTTGTACAAATTCA 6 18701567 0.917906071 3 5 48 1 0.84509804 0.428571429 0.166666667 0.285714286 6 0 0 7 2L:18701555-18701591 7 6.5 239 FBgn0032702 2337.326667 113.6933333 174.6866667 0.002780955 0.057171338 0.03720948 3 2 2.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 18704413 18704419 + 2L_18704413_18704419_+ 0.748425492 0.748368018 0.748396755 4.07E-05 CG10343 FBtr0081098|FBtr0081098|FBtr0081098 18704335|18704335|18704335 18704454|18704454|18704454 2L + 18704368 18704427 3'utr CG10343 FlyBase G5115.1 CATCGAGGAAACCTTAAATTGAAATCAAAAGCCAATACTATTTTATGTGATAGAATAAAC 13 18704409 0.975584137 4 11 100 0.857142857 1.079181246 0.142857143 0.076923077 0.142857143 13 2 0 12 2L:18704368-18704427 7 CG10343 FBtr0081098|FBtr0081098|FBtr0081098 18704335|18704335|18704335 18704454|18704454|18704454 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 18704372 18704452 3'utr CG10343 FlyBase G3989.1 GAGGAAACCTTAAATTGAAATCAAAAGCCAATACTATTTTATGTGATAGAATAAACGCGAGTAACTGCATGGGCGGCTATC 7 18704409 0.98105319 4 7 43 1 1 0 0.428571429 0.6 7 0 0 10 2L:18704372-18704452 7 7 240 FBgn0032703 216.33 32.94333333 50.78 0.032357972 0.212486087 0.137849547 4 4 4 0.2 dme-miR-184-3p 6mer3-8 TCCGTC 2L 18706203 18706208 - 2L_18706203_18706208_- 0.991702963 0.696965544 0.844334254 0.208410885 Faf FBtr0343115 18706008 18706532 2L - 18706175 18706235 3'utr Faf FlyBase G11451.1 CGTTGTTATGTTAGCTGTACTTATACTTCCGTCTATTTAACGAATAATAGAGGCACATTCT 12 18706209 0.990508639 6 12 124 1 1.230448921 0.058823529 0.333333333 0.529411765 12 0 0 17 2L:18706175-18706235 6 Faf FBtr0343115 18706008 18706532 TCCGTC 6mer3-8 dme-miR-184-3p 2L - 18706197 18706228 3'utr Faf FlyBase G8798.1 ATGTTAGCTGTACTTATACTTCCGTCTATTTA 8 18706209 0.789001306 2 8 82 1 1.079181246 0 0.375 0.583333333 8 0 0 12 2L:18706197-18706228 6 9 241 FBgn0025608 1253.34 66.89333333 102.5866667 0.007180813 0.134542555 0.087730699 1 1 1 0.2 dme-bantam-3p 6mer3-8 TGATCT 2L 18706342 18706347 - 2L_18706342_18706347_- 0.999252841 0.988394614 0.993823728 0.007677907 Faf FBtr0343115 18706008 18706532 2L - 18706325 18706360 3'utr Faf FlyBase G11452.1 TAGGTTGATTCTCTGATCTGCCCAACACCATCAACC 6 18706344 0.727158865 3 6 36 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2L:18706325-18706360 6 Faf FBtr0343115 18706008 18706532 TGATCT 6mer3-8 dme-bantam-3p 2L - 18706322 18706359 3'utr Faf FlyBase G8799.1 AGGTTGATTCTCTGATCTGCCCAACACCATCAACCAAC 5 18706342 0.964017397 2 5 27 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 2L:18706322-18706359 6 5.5 242 FBgn0025608 1253.34 66.89333333 102.5866667 0.004388275 0.08222045 0.053613205 -3 -5 -4 0.2 dme-miR-980-3p 6mer3-8 GGCAGC 2L 18711278 18711283 - 2L_18711278_18711283_- 0.993694411 0.999922439 0.996808425 0.004403861 Irk3 FBtr0081125|FBtr0343114 18711069|18711069 18711336|18711336 2L - 18711248 18711297 3'utr Irk3 FlyBase G11464.1 CGCATTACACTTTTGGCAGCACTATATTAATAACGAATTCAAAAACATTT 8 18711284 0.988187978 3 7 62 1 0.954242509 0 0.125 0.222222222 8 0 0 9 2L:18711248-18711297 6 Irk3 FBtr0081125|FBtr0343114 18711069|18711069 18711336|18711336 GGCAGC 6mer3-8 dme-miR-980-3p 2L - 18711262 18711297 3'utr Irk3 FlyBase G8807.1 CGCATTACACTTTTGGCAGCACTATATTAATAACGA 5 18711284 0.950480016 2 4 32 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2L:18711262-18711297 6 5 243 FBgn0032706 11.00333333 0.756666667 1.173333333 0.454407755 6.607929515 4.261363636 1 1 1 0.2 dme-miR-1008-3p 6mer3-8 AGCTGT 2L 18833929 18833934 - 2L_18833929_18833934_- 0.976739875 0.926792405 0.95176614 0.035318216 CG10600 FBtr0273228|FBtr0081120|FBtr0331194 18833708|18833708|18833708 18834497|18834497|18834497 2L - 18833915 18833962 3'utr CG10600 FlyBase G11474.1 AAGTTTTTTAATGCAGGCTGGTACACTGAGCTGTTATAGTGTGTATTT 5 18833936 0.9850188 3 4 39 0.8 0.602059991 0.2 0 0 5 1 0 4 2L:18833915-18833962 6 CG10600 FBtr0331194|FBtr0081120|FBtr0273228 18833708|18833708|18833708 18834497|18834497|18834497 AGCTGT 6mer3-8 dme-miR-1008-3p 2L - 18833916 18833962 3'utr CG10600 FlyBase G8816.1 AAGTTTTTTAATGCAGGCTGGTACACTGAGCTGTTATAGTGTGTATT 9 18833937 0.805101533 6 9 66 1 1.041392685 0.090909091 0.111111111 0.272727273 9 0 0 11 2L:18833916-18833962 6 5 244 FBgn0032717 1261.5 29.36666667 45.24666667 0.003963535 0.170261067 0.110505378 2 3 2.5 0.2 dme-miR-283-5p 6mer2-7 GATATT 2L 18834198 18834203 - 2L_18834198_18834203_- 0.999850731 0.99975823 0.99980448 6.54E-05 CG10600 FBtr0273228|FBtr0081120|FBtr0331194 18833708|18833708|18833708 18834497|18834497|18834497 2L - 18834178 18834256 3'utr CG10600 FlyBase G11476.1 GCAGGAGTCGCTATTATACCATTTATTTTGAAAATTGTTATTCCTTGTTCTGCGATATTGAGCAGCCACAGTTTTGTGC 23 18834208 0.990206449 8 22 221 0.962962963 1.414973348 0.296296296 0.173913043 0.296296296 23 1 0 26 2L:18834178-18834256 6 CG10600 FBtr0331194|FBtr0081120|FBtr0273228 18833708|18833708|18833708 18834497|18834497|18834497 GATATT 6mer2-7 dme-miR-283-5p 2L - 18834183 18834226 3'utr CG10600 FlyBase G8818.1 AAAATTGTTATTCCTTGTTCTGCGATATTGAGCAGCCACAGTTT 18 18834208 0.991854551 4 14 163 0.878787879 0.860338007 0.090909091 0.555555556 0.757575758 18 1 3 29 2L:18834183-18834226 6 17.5 245 FBgn0032717 1261.5 29.36666667 45.24666667 0.013872374 0.595913734 0.386768823 5 5 5 0.2 dme-bantam-3p 7mer-A1 GATCTCA 2L 18834354 18834360 - 2L_18834354_18834360_- 0.819282557 0.770303247 0.794792902 0.034633666 CG10600 FBtr0273228|FBtr0081120|FBtr0331194 18833708|18833708|18833708 18834497|18834497|18834497 2L - 18834334 18834394 3'utr CG10600 FlyBase G11477.1 AACGGATTTCGAGTAGCTGAATCCTTTAAAGGAAGATCTCAACTCTGAAAGGGATTTCAAT 25 18834371 0.670145898 10 25 145 1 1.477121255 0.066666667 0.16 0.3 25 0 0 30 2L:18834334-18834394 7 CG10600 FBtr0331194|FBtr0081120|FBtr0273228 18833708|18833708|18833708 18834497|18834497|18834497 GATCTCA 7mer-A1 dme-bantam-3p 2L - 18834309 18834395 3'utr CG10600 FlyBase G8819.1 AAACGGATTTCGAGTAGCTGAATCCTTTAAAGGAAGATCTCAACTCTGAAAGGGATTTCAATACTTACTGAAGGTTGGCCATACAAT 21 18834373 0.930348484 9 18 128 0.766666667 0.662757832 0.1 0.333333333 0.533333333 21 3 4 23 2L:18834309-18834395 7 12.5 246 FBgn0032717 1261.5 29.36666667 45.24666667 0.009908839 0.425652667 0.276263445 11 13 12 0.2 dme-miR-282-5p 7mer-m8 AGAGGCT 2L 18834458 18834464 - 2L_18834458_18834464_- 0.623363491 0.608183565 0.615773528 0.01073381 CG10600 FBtr0273228|FBtr0081120|FBtr0331194 18833708|18833708|18833708 18834497|18834497|18834497 2L - 18834425 18834570 stop_codon CG10600 FlyBase G11478.1 CTCATCATCGACATCCTCGGCAACAACGAATAGTTCGCTCTCCTCTTACGCCGGTTCCAACAATAGCTTTTGAAACTGGGAAAAGAAATGGACGGAAAGCGAGAGTAGAGGCTCCTATTTGGACTTTATGTGAAACTATATATTTT 271 18834465 0.97438594 18 269 1661 0.993865031 2.51054501 0.457055215 0.162361624 0.303680982 271 2 0 324 2L:18834425-18834570 7 CG10600 FBtr0331194|FBtr0081120|FBtr0273228 18833708|18833708|18833708 18834497|18834497|18834497 AGAGGCT 7mer-m8 dme-miR-282-5p 2L - 18834419 18834523 stop_codon CG10600 FlyBase G8820.1 ACGCCGGTTCCAACAATAGCTTTTGAAACTGGGAAAAGAAATGGACGGAAAGCGAGAGTAGAGGCTCCTATTTGGACTTTATGTGAAACTATATATTTTGTAAAT 195 18834451 0.912020358 16 187 1261 0.964788732 1.960629308 0.461267606 0.317948718 0.531690141 195 8 2 274 2L:18834419-18834523 7 206 247 FBgn0032717 1261.5 29.36666667 45.24666667 0.163297662 7.014755959 4.552821571 1 -13 -6 0.2 dme-miR-92b-3p 6mer3-8 GTGCAA 2L 18958064 18958069 - 2L_18958064_18958069_- 0.961652679 0.975371211 0.968511945 0.009700444 Nak FBtr0340325|FBtr0081187 18957730|18957898 18958299|18958299 2L - 18957985 18958090 3'utr Nak FlyBase G11532.1 AATACCTATAACTGTTATTTAGTGCAAAAATTTAAACTAGTTTTAGAAGCGAAACATGTTTTAGAATTTATACAGTGCGTAAGTTTACCAAAGTTACATTTATTTT 21 18958072 0.985143957 8 20 171 0.96 1.380211242 0.04 0.19047619 0.32 21 1 0 24 2L:18957985-18958090 6 Nak FBtr0081187|FBtr0340325 18957898|18957730 18958299|18958299 GTGCAA 6mer3-8 dme-miR-92b-3p 2L - 18958058 18958096 3'utr Nak FlyBase G8856.1 AAGAACAATACCTATAACTGTTATTTAGTGCAAAAATTT 8 18958072 0.698491242 4 8 76 1 1.176091259 0 0.375 0.666666667 8 0 0 15 2L:18958058-18958096 6 11 248 FBgn0015772 651.1433333 17.45333333 26.77666667 0.016893362 0.630252101 0.410805428 3 3 3 0.2 dme-miR-14-3p 7mer-A1 AGACTGA 2L 18958258 18958264 - 2L_18958258_18958264_- 0.605884935 0.536468431 0.571176683 0.049084878 Nak FBtr0340325|FBtr0081187 18957730|18957898 18958299|18958299 2L - 18958245 18958292 3'utr Nak FlyBase G11533.2 AGTGGGGCGAGACCATCAAGGAGACCTGAGACTGAGTGTTTCAAATTA 165 18958266 0.966311253 6 159 540 0.961904762 2.305351369 0.138095238 0.224242424 0.39047619 165 8 0 202 2L:18958245-18958292 7 Nak FBtr0081187|FBtr0340325 18957898|18957730 18958299|18958299 AGACTGA 7mer-A1 dme-miR-14-3p 2L - 18958246 18958292 3'utr Nak FlyBase G8858.1 AGTGGGGCGAGACCATCAAGGAGACCTGAGACTGAGTGTTTCAAATT 98 18958266 0.958550746 4 91 307 0.942857143 1.643452676 0.078571429 0.326530612 0.528571429 98 6 2 132 2L:18958246-18958292 7 129 249 FBgn0015772 651.1433333 17.45333333 26.77666667 0.198113063 7.391138273 4.817627287 2 2 2 0.2 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 18961469 18961476 - 2L_18961469_18961476_- 0.613309584 0.621646897 0.617478241 0.005895361 Nak FBtr0340326|FBtr0081189 18960925|18961114 18962750|18962873 2L - 18961463 18961492 3'utr Nak FlyBase G11544.1 AATTGAAATGTTCAATTAGCTTTAATTACT 12 18961477 0.785599795 2 12 109 1 1.204119983 0.25 0.166666667 0.375 12 0 0 16 2L:18961463-18961492 8 Nak FBtr0081189|FBtr0340326 18961114|18960925 18962873|18962750 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 18961453 18961525 3'utr Nak FlyBase G8866.1 TGATCACTTTTGTTCTCTACACACAGACACACCAATTGAAATGTTCAATTAGCTTTAATTACTACTCTTGTTA 10 18961477 0.985264676 5 9 84 0.9375 1.176091259 0.0625 0.3 0.5625 10 1 0 15 2L:18961453-18961525 8 8.5 250 FBgn0015772 651.1433333 17.45333333 26.77666667 0.013053961 0.487012987 0.317440558 1 1 1 0.2 dme-miR-8-3p 7mer-m8 CAGTATT 2L 18977655 18977661 - 2L_18977655_18977661_- 0.655803557 0.65495047 0.655377014 0.000603233 Swip-1 FBtr0340322 18977517 18978354 2L - 18977634 18977685 3'utr Swip-1 FlyBase G11555.2 AAAGTAAAACAATAAGTTTCGATTCAGTATTTCACGTTTAAAGTTAGCGATT 72 18977663 0.780386058 7 64 605 0.875 1.886490725 0.056818182 0.208333333 0.352272727 72 11 0 77 2L:18977634-18977685 7 Swip-1 FBtr0340322 18977517 18978354 CAGTATT 7mer-m8 dme-miR-8-3p 2L - 18977594 18977690 3'utr Swip-1 FlyBase G8872.1 AGCCTAAAGTAAAACAATAAGTTTCGATTCAGTATTTCACGTTTAAAGTTAGCGATTTAAGCAATACTAATGCGTTAAATACGAATACACAAGAAAA 69 18977663 0.98739128 9 65 564 0.944954128 1.53571597 0.082568807 0.449275362 0.651376147 69 4 2 103 2L:18977594-18977690 7 66 251 FBgn0032731 3016.77 219.0933333 334.6766667 0.021877704 0.30124148 0.197205263 2 2 2 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 19008169 19008176 + 2L_19008169_19008176_+ 0.496835346 0.480353843 0.488594594 0.01165418 CG31793 FBtr0340318|FBtr0081138 19008052|19008052 19008234|19008234 2L + 19008129 19008187 3'utr CG31793 FlyBase G5156.1 TCGTGGTCATAGATTCAGTTTTATAGAATACAAAACGTTTGTACTTAAGGGAGTAAAGC 19 19008168 0.797798843 3 19 146 1 1.342422681 0.045454545 0.157894737 0.272727273 19 0 0 22 2L:19008129-19008187 8 CG31793 FBtr0081138|FBtr0340318 19008052|19008052 19008234|19008234 GTACTTAA 8mer-A1 dme-miR-252-5p 2L + 19008131 19008187 3'utr CG31793 FlyBase G4010.1 GTGGTCATAGATTCAGTTTTATAGAATACAAAACGTTTGTACTTAAGGGAGTAAAGC 11 19008142 0.976547565 3 11 84 1 1.146128036 0.142857143 0.272727273 0.428571429 11 0 0 14 2L:19008131-19008187 8 8 252 FBgn0051793 240.37 6.446666667 9.863333333 0.033282024 1.240951396 0.811084826 1 27 14 0.2 dme-miR-305-3p 6mer3-8 ATGTGC 2L 19041244 19041249 + 2L_19041244_19041249_+ 0.989221584 0.986272091 0.987746837 0.002085611 mib2 FBtr0336840|FBtr0336841|FBtr0081142 19041121|19041121|19041121 19041473|19041541|19041541 2L + 19041211 19041257 3'utr mib2 FlyBase G5181.1 CACAAAACAAACACACACTCACATTGCCGTGTCATGTGCAAATCGAA 6 19041235 0.959420325 4 6 30 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 2L:19041211-19041257 6 mib2 FBtr0336840|FBtr0336841|FBtr0081142 19041121|19041121|19041121 19041473|19041541|19041541 ATGTGC 6mer3-8 dme-miR-305-3p 2L + 19041227 19041269 3'utr mib2 FlyBase G4026.1 ACTCACATTGCCGTGTCATGTGCAAATCGAAATTATTATTTAT 6 19041235 0.784715718 4 5 37 0.714285714 0.698970004 0.285714286 0.166666667 0.285714286 6 2 0 5 2L:19041227-19041269 6 4 253 FBgn0086442 1398.326667 43.78666667 67.22333333 0.002860562 0.09135201 0.059503149 9 9 9 0.2 dme-miR-932-5p 7mer-A1 GAATTGA 2L 19069567 19069573 + 2L_19069567_19069573_+ 0.823025911 0.82318172 0.823103816 0.000110167 CG17343 FBtr0081151 19065246 19069673 2L + 19069535 19069593 3'utr CG17343 FlyBase G5242.1 TTGTGCTTTTTCGCGCACTGCAAGCGAAATTAGAATTGATCGTCGTAGTTCACTAATAT 37 19069570 0.7690261 7 33 303 0.886363636 1.290034611 0.068181818 0.162162162 0.295454545 37 4 1 39 2L:19069535-19069593 7 CG17343 FBtr0081151 19065246 19069673 GAATTGA 7mer-A1 dme-miR-932-5p 2L + 19069534 19069597 3'utr CG17343 FlyBase G4075.1 CTTGTGCTTTTTCGCGCACTGCAAGCGAAATTAGAATTGATCGTCGTAGTTCACTAATATATTT 30 19069570 0.730505974 7 29 235 0.96969697 1.505149978 0.060606061 0.1 0.181818182 30 1 0 32 2L:19069534-19069597 7 29.5 254 FBgn0032751 35 7.813333333 11.57333333 0.842857143 3.77559727 2.548963134 -3 -3 -3 0.2 dme-miR-8-3p 6mer2-7 AGTATT 2L 19172669 19172674 + 2L_19172669_19172674_+ 0.995945141 0.999956113 0.997950627 0.002836205 brat FBtr0081160 19171258 19179758 2L + 19172635 19172683 3'utr brat FlyBase G5280.1 GTATCTTGAGGATGTGTGTGCATAGATCTAATTGAGTATTTAAAAGTAA 12 19172666 0.798441665 7 12 98 1 1.255272505 0.111111111 0.25 0.5 12 0 0 18 2L:19172635-19172683 6 brat FBtr0081160 19171258 19179758 AGTATT 6mer2-7 dme-miR-8-3p 2L + 19172630 19172684 3'utr brat FlyBase G4109.1 TCAAAGTATCTTGAGGATGTGTGTGCATAGATCTAATTGAGTATTTAAAAGTAAC 12 19172652 0.670140593 6 12 100 1 1.397940009 0.36 0.666666667 0.84 12 0 0 25 2L:19172630-19172684 6 4.5 255 FBgn0010300 4742.333333 86.64666667 133.0666667 0.0009489 0.051935062 0.033817635 3 17 10 0.2 dme-miR-304-5p 8mer-A1 TGAGATTA 2L 19173529 19173536 + 2L_19173529_19173536_+ 0.535632609 0.431252989 0.483442799 0.073807523 brat FBtr0081160 19171258 19179758 2L + 19173494 19173548 3'utr brat FlyBase G5288.1 GATAATTACCTATGTTTTGTGTGTATCTACTTAAGTGAGATTATTAAATATACGA 23 19173528 0.969755715 8 21 212 0.923076923 1.380211242 0.038461538 0.086956522 0.192307692 23 2 0 24 2L:19173494-19173548 8 brat FBtr0081160 19171258 19179758 TGAGATTA 8mer-A1 dme-miR-304-5p 2L + 19173507 19173549 3'utr brat FlyBase G4117.1 GTTTTGTGTGTATCTACTTAAGTGAGATTATTAAATATACGAA 22 19173528 0.748183524 6 18 181 0.848484848 1.447158031 0.03030303 0.363636364 0.575757576 22 5 0 28 2L:19173507-19173549 8 20.5 256 FBgn0010300 4742.333333 86.64666667 133.0666667 0.004322767 0.23659306 0.154058116 1 1 1 0.2 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 2L 19174189 19174194 + 2L_19174189_19174194_+ 0.549371201 0.949380316 0.749375758 0.282849147 brat FBtr0081160|FBtr0081160 19171258|19171258 19179758|19179758 2L + 19174136 19174208 3'utr brat FlyBase G5293.1 CAACCCAACAACAAATGCCACAAAAACCAACTGAAAAACCATTAAAGATTTTATACTTATTCTGATAAAAAGA 10 19174195 0.999834673 8 10 53 1 1.079181246 0.166666667 0.2 0.333333333 10 0 0 12 2L:19174136-19174208 6 brat FBtr0081160|FBtr0081160 19171258|19171258 19179758|19179758 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 2L + 19174140 19174199 3'utr brat FlyBase G4121.1 CCAACAACAAATGCCACAAAAACCAACTGAAAAACCATTAAAGATTTTATACTTATTCTG 8 19174177 0.962709418 6 8 40 1 1 0.2 0.25 0.4 8 0 0 10 2L:19174140-19174199 6 4.5 257 FBgn0010300 4742.333333 86.64666667 133.0666667 0.0009489 0.051935062 0.033817635 -6 12 3 0.2 dme-miR-14-3p 6mer2-7 AGACTG 2L 19174483 19174488 + 2L_19174483_19174488_+ 0.753022505 0.630013808 0.691518157 0.086980286 brat FBtr0081160 19171258 19179758 2L + 19174464 19174502 3'utr brat FlyBase G5294.1 GATGAATTGAGAATCTAATAGACTGTGCAACCACAAAAA 46 19174482 0.891133762 5 44 235 0.96 1.380211242 0 0.086956522 0.16 46 1 1 48 2L:19174464-19174502 6 brat FBtr0081160 19171258 19179758 AGACTG 6mer2-7 dme-miR-14-3p 2L + 19174459 19174503 3'utr brat FlyBase G4122.1 AAATTGATGAATTGAGAATCTAATAGACTGTGCAACCACAAAAAT 40 19174489 0.960105864 5 35 205 0.876923077 1.056904851 0 0.45 0.661538462 40 4 4 57 2L:19174459-19174503 6 42.5 258 FBgn0010300 4742.333333 86.64666667 133.0666667 0.008961833 0.490497807 0.319388778 1 -6 -2.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 19177915 19177922 + 2L_19177915_19177922_+ 0.631135195 0.629776034 0.630455615 0.0009611 brat FBtr0336627|FBtr0081160 19177522|19171258 19179758|19179758 2L + 19177881 19177935 3'utr brat FlyBase G5295.1 ATATAGTGCAACTAAGCCGATCATGGTATCATCATCTAGTCATCATGCATACATA 17 19177912 0.980899443 7 17 122 1 1.380211242 0.041666667 0.352941176 0.541666667 17 0 0 24 2L:19177881-19177935 8 brat FBtr0336627|FBtr0081160 19177522|19171258 19179758|19179758 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L + 19177876 19177930 3'utr brat FlyBase G4123.1 ACGCTATATAGTGCAACTAAGCCGATCATGGTATCATCATCTAGTCATCATGCAT 8 19177915 0.981039364 3 8 58 1 1.176091259 0 0.625 0.8 8 0 0 15 2L:19177876-19177930 8 11.5 259 FBgn0010300 4742.333333 86.64666667 133.0666667 0.002424967 0.132722936 0.086422846 3 0 1.5 0.2 dme-miR-92b-3p 7mer-m8 GTGCAAT 2L 19179882 19179888 - 2L_19179882_19179888_- 0.552610857 0.629661538 0.591136198 0.054483002 CG17568 FBtr0081233 19179747 19179946 2L - 19179873 19179901 3'utr CG17568 FlyBase G11636.1 ATCAGATAGGAATGTGCAATCTCAAATTT 13 19179888 0.799746802 2 11 70 0.933333333 0.84509804 0.133333333 0.153846154 0.266666667 13 0 1 14 2L:19179873-19179901 7 CG17568 FBtr0081233 19179747 19179946 GTGCAAT 7mer-m8 dme-miR-92b-3p 2L - 19179872 19179905 3'utr CG17568 FlyBase G8935.1 TGGCATCAGATAGGAATGTGCAATCTCAAATTTT 8 19179888 0.79263559 3 7 44 1 1.113943352 0.076923077 0.375 0.615384615 8 0 0 13 2L:19179872-19179905 7 9.5 260 FBgn0032763 137.99 9.22 14.17666667 0.068845569 1.030368764 0.670115213 0 0 0 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2L 19189662 19189668 + 2L_19189662_19189668_+ 0.795540618 0.463775113 0.629657865 0.234593635 pigeon FBtr0302561|FBtr0081194 19189305|19189584 19189938|19189938 2L + 19189596 19189861 3'utr pigeon FlyBase G5309.1 AAGAGTAACTAATGAAGTATTGTGTCAAATTATCAAGTACTTAGCCAAGGCCAGTTTGCAAATATTCCAAAGATTTGATTTGTCAAATGTATTAGTTAAGATTCTTCTCGTGCAGCTTTGATTTTTGTTAGGGTTCTTCTGTGTGCTTTTAGTATTAATTTTCTGTTCCTATTATTTGTGTAACGACTGATACACATTCCAAGTCTGTAATTATAAATTATTTATGTTGTTAATTGATGTACCTAAAATCATGTACGTATTTATAT 326 19189660 0.837831772 58 307 3172 0.950904393 1.611605309 0.124031008 0.165644172 0.297157623 326 11 8 368 2L:19189596-19189861 7 pigeon FBtr0302561|FBtr0081194 19189305|19189584 19189938|19189938 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2L + 19189639 19189675 3'utr pigeon FlyBase G4130.2 GCCAAGGCCAGTTTGCAAATATTCCAAAGATTTGATT 44 19189660 0.847628176 4 43 299 1 1.812913357 0.338461538 0.325581395 0.553846154 43 0 0 65 2L:19189639-19189675 7 73.5 261 FBgn0010309 154.9266667 5.81 8.776666667 0.474418004 12.65060241 8.374477782 2 2 2 0.2 dme-miR-283-5p 8mer-m1 TGATATTT 2L 19338842 19338849 - 2L_19338842_19338849_- 0.555590548 0.482922518 0.519256533 0.051384036 dnt FBtr0336820|FBtr0081224 19338667|19338676 19339164|19339164 2L - 19338827 19338881 3'utr dnt FlyBase G11641.1 CTAGCTAAAACAAAGGCCGAAATCAAATATAGTGATATTTATAAATAGAGATAGC 26 19338853 0.824696096 8 22 194 0.866666667 1.414973348 0.133333333 0.153846154 0.266666667 26 4 0 26 2L:19338827-19338881 8 dnt FBtr0336820|FBtr0081224 19338667|19338676 19339164|19339164 TGATATTT 8mer-m1 dme-miR-283-5p 2L - 19338831 19338869 3'utr dnt FlyBase G8941.1 AAGGCCGAAATCAAATATAGTGATATTTATAAATAGAGA 11 19338853 0.850910768 3 9 80 0.882352941 0.698970004 0.235294118 0.454545455 0.647058824 11 0 2 15 2L:19338831-19338869 8 16.5 262 FBgn0024245 411 18.84333333 28.87333333 0.040145985 0.875641252 0.571461556 4 4 4 0.2 dme-miR-318-3p 8mer-A1 CCCAGTGA 2L 19390517 19390524 - 2L_19390517_19390524_- 0.641514756 0.670822078 0.656168417 0.020723391 CG17544 FBtr0081216|FBtr0300822|FBtr0081218|FBtr0081217 19390368|19390368|19390368|19390368 19390668|19390668|19390668|19390668 2L - 19390510 19390542 3'utr CG17544 FlyBase G11650.1 ATGGCCAACTACATTGATCCCAGTGAAAGGTTT 12 19390529 0.694743677 2 12 61 1 1.113943352 0.153846154 0.083333333 0.153846154 12 0 0 13 2L:19390510-19390542 8 CG17544 FBtr0081217|FBtr0081218|FBtr0300822|FBtr0081216 19390368|19390368|19390368|19390368 19390668|19390668|19390668|19390668 CCCAGTGA 8mer-A1 dme-miR-318-3p 2L - 19390507 19390541 3'utr CG17544 FlyBase G8947.1 TGGCCAACTACATTGATCCCAGTGAAAGGTTTTTT 8 19390528 0.679659964 2 7 48 0.9 0.653212514 0 0.125 0.3 8 0 1 9 2L:19390507-19390541 8 10 263 FBgn0032775 1454.426667 69.89666667 107.4566667 0.006875562 0.143068339 0.093060769 5 4 4.5 0.2 dme-miR-31a-5p 8mer-A1 TCTTGCCA 2L 19429101 19429108 + 2L_19429101_19429108_+ 0.625726167 0.609716827 0.617721497 0.011320355 CG16771 FBtr0334164|FBtr0302874|FBtr0302938|FBtr0334165|FBtr0081204 19429037|19429037|19429037|19429037|19429037 19429224|19429224|19429224|19429224|19429224 2L + 19429057 19429161 3'utr CG16771 FlyBase G5315.1 AGCCAACAAAACACTTTGATATATGTAGTTATAATGAAAACTGTTCTTGCCAAGCTTACAAATTAGATATAAGTCAAAGATTGGGTCACCGAAATAGGACATGAG 42 19429100 0.974806979 13 40 272 0.97826087 1.653212514 0.260869565 0.095238095 0.173913043 42 1 0 45 2L:19429057-19429161 8 CG16771 FBtr0334165|FBtr0302938|FBtr0302874|FBtr0334164|FBtr0081204 19429037|19429037|19429037|19429037|19429037 19429224|19429224|19429224|19429224|19429224 TCTTGCCA 8mer-A1 dme-miR-31a-5p 2L + 19429056 19429114 3'utr CG16771 FlyBase G4133.1 TAGCCAACAAAACACTTTGATATATGTAGTTATAATGAAAACTGTTCTTGCCAAGCTTA 25 19429100 0.98478031 3 19 169 0.794117647 0.73239376 0.235294118 0.28 0.470588235 25 3 4 27 2L:19429056-19429114 8 23 264 FBgn0032779 937.25 47.39333333 72.85666667 0.024539877 0.485300324 0.315688338 1 1 1 0.2 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 19435335 19435342 + 2L_19435335_19435342_+ 0.609901445 0.618167613 0.614034529 0.005845086 Rab9 FBtr0081206 19435305 19435841 2L + 19435278 19435396 stop_codon Rab9 FlyBase G5327.1 AGGCGCCAGCCACCAATTATCGGCTATGAGCAGACAGACAGGAGCTGTCAGGAAACTTACGCTTAATTTAACCACTCACCCCGCCGGGTTGACCTTCAGATTCAATGCATTCCAGTCCG 230 19435334 0.980366963 11 226 1628 0.985185185 1.947760382 0.022222222 0.12173913 0.251851852 230 2 2 266 2L:19435278-19435396 8 Rab9 FBtr0081206 19435305 19435841 TACGCTTA 8mer-A1 dme-miR-965-3p 2L + 19435284 19435408 stop_codon Rab9 FlyBase G4142.1 CAGCCACCAATTATCGGCTATGAGCAGACAGACAGGAGCTGTCAGGAAACTTACGCTTAATTTAACCACTCACCCCGCCGGGTTGACCTTCAGATTCAATGCATTCCAGTCCGCGGAGGGGCAGG 104 19435334 0.979911182 11 100 697 0.966216216 2.155336037 0.060810811 0.307692308 0.513513514 104 5 0 143 2L:19435284-19435408 8 158.5 265 FBgn0032782 68.33333333 5.243333333 8.043333333 2.319512195 30.22886205 19.70576046 1 1 1 0.2 dme-bantam-3p 6mer2-7 GATCTC 2L 19435546 19435551 + 2L_19435546_19435551_+ 0.993383954 0.998750099 0.996067026 0.003794406 Rab9 FBtr0081206 19435305 19435841 2L + 19435521 19435580 3'utr Rab9 FlyBase G5329.1 GAGCTAGCTTCTATGTCAAGAATAGGATCTCCATTTTTACTTGCTATGCTTTAATATTAT 26 19435555 0.692278769 9 24 201 0.894736842 1.531478917 0.078947368 0.346153846 0.552631579 26 4 0 34 2L:19435521-19435580 6 Rab9 FBtr0081206 19435305 19435841 GATCTC 6mer2-7 dme-bantam-3p 2L + 19435436 19435561 3'utr Rab9 FlyBase G4143.1 ACCCAATGTTGATGGCTGTAGAGAGTGGATTGCCTCGTTGTGGTTGATATTCTAAGGGAACTATGCTTCACAGCGAGCTAACTATGAGCTAGCTTCTATGTCAAGAATAGGATCTCCATTTTTACT 33 19435554 0.777402925 11 30 217 0.886792453 1.672097858 0.264150943 0.393939394 0.622641509 33 6 0 47 2L:19435436-19435561 6 16 266 FBgn0032782 68.33333333 5.243333333 8.043333333 0.234146341 3.051493961 1.989225031 -9 -8 -8.5 0.2 dme-bantam-3p 6mer3-8 TGATCT 2L 19443187 19443192 - 2L_19443187_19443192_- 0.765050949 0.578843956 0.671947452 0.131668162 Hs2st FBtr0081288 19442831 19443303 2L - 19443105 19443229 3'utr Hs2st FlyBase G11682.1 TTGTATTGTAAATACGTAATTCTCCTTCGCATAGATTTGATCTGTACTTAAGAGTAACTCATCCGTACACTTAAGCGCTACCTAAGACTTTAGCATTGAATATCGTTGACATATTACTAACCCAA 139 19443187 0.717122147 23 133 1097 0.975 1.892094603 0.225 0.122302158 0.2375 139 3 1 156 2L:19443105-19443229 6 Hs2st FBtr0081288 19442831 19443303 TGATCT 6mer3-8 dme-bantam-3p 2L - 19443129 19443216 3'utr Hs2st FlyBase G8968.1 ACGTAATTCTCCTTCGCATAGATTTGATCTGTACTTAAGAGTAACTCATCCGTACACTTAAGCGCTACCTAAGACTTTAGCATTGAAT 87 19443187 0.785361728 11 83 710 0.961538462 2.096910013 0.176923077 0.379310345 0.584615385 87 5 0 125 2L:19443129-19443216 6 81 267 FBgn0024230 209.3333333 15.55 23.84 0.386942675 5.209003215 3.397651007 -5 -5 -5 0.2 dme-miR-276a-3p 6mer3-8 AGTTCC 2L 19497418 19497423 + 2L_19497418_19497423_+ 0.996098929 0.640674631 0.81838678 0.251322933 swm FBtr0081245|FBtr0331326|FBtr0081244|FBtr0331325 19497383|19497383|19497383|19497383 19497978|19497835|19497835|19497978 2L + 19497382 19497484 stop_codon swm FlyBase G5373.1 TGATCCATCGCCCTCCGCTGTTGAGGCGGCCGGGAAAGTTCCGTGGGGCTCACAAGTGTTAGGAAACCCTTAACATGTATTTGTTGTTATTCTATATCTAACT 27 19497424 0.966080544 12 27 167 1 1.491361694 0.096774194 0.074074074 0.193548387 27 0 0 31 2L:19497382-19497484 6 swm FBtr0081244|FBtr0331325|FBtr0081245|FBtr0331326 19497383|19497383|19497383|19497383 19497835|19497978|19497978|19497835 AGTTCC 6mer3-8 dme-miR-276a-3p 2L + 19497404 19497472 3'utr swm FlyBase G4177.1 GAGGCGGCCGGGAAAGTTCCGTGGGGCTCACAAGTGTTAGGAAACCCTTAACATGTATTTGTTGTTATT 12 19497421 0.974695135 5 11 76 0.941176471 1.204119983 0.117647059 0.333333333 0.529411765 12 1 0 16 2L:19497404-19497472 6 10.5 268 FBgn0002044 1462.05 43.20666667 66.00333333 0.007181697 0.243018053 0.159082875 -6 -3 -4.5 0.2 dme-miR-33-5p 7mer-A1 AATGCAA 2L 19497920 19497926 + 2L_19497920_19497926_+ 0.76916136 0.776514085 0.772837722 0.005199144 swm FBtr0081245|FBtr0331325 19497383|19497383 19497978|19497978 2L + 19497901 19497944 3'utr swm FlyBase G5376.1 AAAAAATCGTAGCAACGTGAATGCAAAACAGCAAGTTATATAGA 13 19497919 0.841590246 2 12 40 0.928571429 1.113943352 0.214285714 0.076923077 0.142857143 13 1 0 13 2L:19497901-19497944 7 swm FBtr0331325|FBtr0081245 19497383|19497383 19497978|19497978 AATGCAA 7mer-A1 dme-miR-33-5p 2L + 19497898 19497933 3'utr swm FlyBase G4178.1 AGAAAAAAATCGTAGCAACGTGAATGCAAAACAGCA 14 19497920 0.778568695 2 14 34 1 1.230448921 0.117647059 0.214285714 0.352941176 14 0 0 17 2L:19497898-19497933 7 13 269 FBgn0002044 1462.05 43.20666667 66.00333333 0.008891625 0.300879494 0.19695975 1 0 0.5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 19502970 19502975 - 2L_19502970_19502975_- 0.999239183 0.997892442 0.998565812 0.000952331 CG10188 FBtr0329963|FBtr0081283|FBtr0081282 19502333|19502333|19502333 19503098|19503128|19503128 2L - 19502956 19502999 3'utr CG10188 FlyBase G11737.1 ATGTACTTCCATACCTGTTGAACTGTACCTATACCATTCGAAAA 32 19502976 0.739775857 5 32 232 1 1.591064607 0.256410256 0.1875 0.333333333 32 0 0 39 2L:19502956-19502999 6 CG10188 FBtr0081282|FBtr0081283|FBtr0329963 19502333|19502333|19502333 19503128|19503128|19503098 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L - 19502957 19502998 3'utr CG10188 FlyBase G9023.1 TGTACTTCCATACCTGTTGAACTGTACCTATACCATTCGAAA 31 19502976 0.670337714 3 31 200 1 1.568201724 0.324324324 0.161290323 0.297297297 31 0 0 37 2L:19502957-19502998 6 27 270 FBgn0032796 423.2433333 9.72 14.90666667 0.06379309 2.777777778 1.811270125 1 1 1 0.2 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 19532732 19532739 + 2L_19532732_19532739_+ 0.599585203 0.59843778 0.599011491 0.000811334 CG10137 FBtr0081248 19532669 19532985 2L + 19532716 19532751 3'utr CG10137 FlyBase G5389.1 TTATTAGAGCAACTATTCTAGTCAGGATACCTACTC 87 19532731 0.691852162 7 84 505 0.970588235 1.995635195 0.078431373 0.126436782 0.254901961 87 3 0 99 2L:19532716-19532751 8 CG10137 FBtr0081248 19532669 19532985 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L + 19532670 19532756 3'utr CG10137 FlyBase G4187.1 GAAAGCGTACACTTAATCGATCTATTGGCCTAGCGAATTAGCGAATTTATTAGAGCAACTATTCTAGTCAGGATACCTACTCAAGGA 53 19532731 0.974949412 6 51 318 0.977272727 1.934498451 0.113636364 0.433962264 0.659090909 53 2 0 86 2L:19532670-19532756 8 68 271 FBgn0032800 178.3133333 6.72 10.33 0.38135118 10.11904762 6.582768635 1 1 1 0.2 dme-miR-1003-3p 7mer-A1 TGTGAGA 2L 19536554 19536560 + 2L_19536554_19536560_+ 0.387741348 0.415632272 0.40168681 0.019721915 CG33116 FBtr0081249 19536464 19537363 2L + 19536510 19536575 3'utr CG33116 FlyBase G5399.2 AAGTTTTTCTGTATATCAAGGAGGCTGTTTAGTTAAACAATTCTTGTGAGATTATGTATAATTTGT 103 19536539 0.612808769 16 89 921 0.884297521 1.330413773 0.099173554 0.165048544 0.289256198 103 10 4 107 2L:19536510-19536575 7 CG33116 FBtr0081249 19536464 19537363 TGTGAGA 7mer-A1 dme-miR-1003-3p 2L + 19536428 19536574 stop_codon CG33116 FlyBase G4194.1 AGCCACAAGCGGAGGAGCCATTGAAGAAAGATATATAAGGCATCGGATTGCGCTATTTTGGATTAGTTGCGAGTTATTTTGCAAGTTTTTCTGTATATCAAGGAGGCTGTTTAGTTAAACAATTCTTGTGAGATTATGTATAATTTG 94 19536538 0.990349243 23 86 857 0.930555556 1.649983544 0.069444444 0.404255319 0.611111111 94 8 2 134 2L:19536428-19536574 7 40 272 FBgn0053116 946.2166667 45.74 70.24333333 0.042273616 0.874508089 0.569449058 15 16 15.5 0.2 dme-miR-7-5p 7mer-A1 TCTTCCA 2L 19536674 19536680 + 2L_19536674_19536680_+ 0.760387788 0.787414605 0.773901197 0.019110834 CG33116 FBtr0081249 19536464 19537363 2L + 19536652 19536708 3'utr CG33116 FlyBase G5400.1 AATGACTATTCACGTAATGCTCTCTTCCAATGATAATTTTTAAACTCGGTTTACGGT 59 19536676 0.781261388 4 57 583 0.970149254 1.812913357 0.059701493 0.101694915 0.208955224 59 2 0 65 2L:19536652-19536708 7 CG33116 FBtr0081249 19536464 19537363 TCTTCCA 7mer-A1 dme-miR-7-5p 2L + 19536647 19536697 3'utr CG33116 FlyBase G4195.1 TTTCCAATGACTATTCACGTAATGCTCTCTTCCAATGATAATTTTTAAACT 24 19536676 0.917917245 4 23 225 0.971428571 1.531478917 0 0.25 0.485714286 24 1 0 34 2L:19536647-19536697 7 40 273 FBgn0053116 946.2166667 45.74 70.24333333 0.042273616 0.874508089 0.569449058 -2 -2 -2 0.2 dme-bantam-3p 6mer3-8 TGATCT 2L 19536803 19536808 + 2L_19536803_19536808_+ 0.999356336 0.944336445 0.97184639 0.038904944 CG33116 FBtr0081249 19536464 19537363 2L + 19536718 19536866 3'utr CG33116 FlyBase G5401.1 ACTTGACGTTATCTGTAATCCGTATTGTATCCAAACTTCAAAGACCCCTTGTAGATCGATTGAATTTACGAGTAATCATGACAAGTGATCTAATCTGCTGCTAAGATATCCAATAAGTATTAGGTAGTAGGCTAAAGTAGCGGCCAGGC 43 19536803 0.978171313 14 43 294 1 1.748188027 0.25 0.279069767 0.446428571 43 0 0 56 2L:19536718-19536866 6 CG33116 FBtr0081249 19536464 19537363 TGATCT 6mer3-8 dme-bantam-3p 2L + 19536711 19536859 3'utr CG33116 FlyBase G4196.1 AATTCCCACTTGACGTTATCTGTAATCCGTATTGTATCCAAACTTCAAAGACCCCTTGTAGATCGATTGAATTTACGAGTAATCATGACAAGTGATCTAATCTGCTGCTAAGATATCCAATAAGTATTAGGTAGTAGGCTAAAGTAGCG 36 19536803 0.982036807 11 32 240 0.929824561 1.423245874 0.210526316 0.388888889 0.614035088 36 3 1 53 2L:19536711-19536859 6 29 274 FBgn0053116 946.2166667 45.74 70.24333333 0.030648372 0.634018365 0.412850567 0 0 0 0.2 dme-miR-79-3p 7mer-m8 TAGCTTT 2L 19536934 19536940 + 2L_19536934_19536940_+ 0.618833287 0.614271036 0.616552162 0.003226033 CG33116 FBtr0081249 19536464 19537363 2L + 19536890 19536960 3'utr CG33116 FlyBase G5402.1 TTAACTTTGCAACTACAGAGCAGCTAACTACTTGTTCTAGCCTTTAGCTTTCCAACTTCATTGCTACGGTT 11 19536933 0.989966537 4 11 112 1 1.079181246 0 0.090909091 0.166666667 11 0 0 12 2L:19536890-19536960 7 CG33116 FBtr0081249 19536464 19537363 TAGCTTT 7mer-m8 dme-miR-79-3p 2L + 19536894 19536947 3'utr CG33116 FlyBase G4197.1 CTTTGCAACTACAGAGCAGCTAACTACTTGTTCTAGCCTTTAGCTTTCCAACTT 10 19536933 0.802010323 4 10 85 1 1.204119983 0 0.5 0.6875 10 0 0 16 2L:19536894-19536947 7 8 275 FBgn0053116 946.2166667 45.74 70.24333333 0.008454723 0.174901618 0.113889812 1 1 1 0.2 dme-miR-282-5p 6mer2-7 GAGGCT 2L 19580838 19580843 - 2L_19580838_19580843_- 0.993110577 0.986951689 0.990031133 0.004355 Hakai FBtr0081263|FBtr0081264 19580610|19580610 19581331|19581331 2L - 19580830 19580869 3'utr Hakai FlyBase G11778.1 CGCTGTTGGCCCAGGTGCCCTGATTGGAGGCTCCACCGAC 6 19580845 0.759629189 2 5 29 1 0.77815125 0.333333333 0 0 6 0 0 6 2L:19580830-19580869 6 Hakai FBtr0081264|FBtr0081263 19580610|19580610 19581331|19581331 GAGGCT 6mer2-7 dme-miR-282-5p 2L - 19580822 19580866 3'utr Hakai FlyBase G9051.1 TGTTGGCCCAGGTGCCCTGATTGGAGGCTCCACCGACGCGCCAAC 6 19580845 0.959170192 3 6 29 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2L:19580822-19580866 6 5 276 FBgn0032812 276.3333333 19.83333333 30.45 0.018094089 0.25210084 0.164203612 2 2 2 0.2 dme-miR-184-3p 6mer2-7 CCGTCC 2L 19581228 19581233 - 2L_19581228_19581233_- 0.805967563 0.957367397 0.88166748 0.107055825 Hakai FBtr0081263|FBtr0081264 19580610|19580610 19581331|19581331 2L - 19581210 19581360 stop_codon Hakai FlyBase G11779.1 GCAAGGCGAGTGGTAGCTATGGCTCCTAAACTAAGCTGTCCTGTCTATAAAAAAACAACCGCTTGCCCCTTGCAGCTCTCCGAGTCGTCTGTCCCCATATCCGTTTCCGCCTCCATTGCGTCCCGTCCCGTCCTGTCGCGGCTGCCACTGA 51 19581235 0.976629298 13 47 315 0.950819672 1.763427994 0.295081967 0.176470588 0.31147541 51 3 0 58 2L:19581210-19581360 6 Hakai FBtr0081264|FBtr0081263 19580610|19580610 19581331|19581331 CCGTCC 6mer2-7 dme-miR-184-3p 2L - 19581200 19581271 3'utr Hakai FlyBase G9052.1 TGTCCCCATATCCGTTTCCGCCTCCATTGCGTCCCGTCCCGTCCTGTCGCGGCTGCCACTGACCGGCGGTGT 20 19581235 0.973533567 7 19 115 0.96 1.079181246 0.24 0.2 0.36 20 0 1 24 2L:19581200-19581271 6 24.5 277 FBgn0032812 276.3333333 19.83333333 30.45 0.088661037 1.235294118 0.804597701 2 2 2 0.2 dme-miR-304-5p 7mer-m8 TGAGATT 2L 19586325 19586331 + 2L_19586325_19586331_+ 0.514433509 0.449806159 0.482119834 0.045698402 CG10366 FBtr0081259 19586225 19586440 2L + 19586274 19586345 3'utr CG10366 FlyBase G5446.1 GTTTCCAAATTCGCCGTATGTTGTGTATTTATAGCTGTTTAAAGATATAGTTGAGATTGTTTTGCATACACT 14 19586324 0.990378153 4 13 138 0.944444444 0.929418926 0.055555556 0.214285714 0.388888889 14 0 1 17 2L:19586274-19586345 7 CG10366 FBtr0081259 19586225 19586440 TGAGATT 7mer-m8 dme-miR-304-5p 2L + 19586280 19586343 3'utr CG10366 FlyBase G4232.1 AAATTCGCCGTATGTTGTGTATTTATAGCTGTTTAAAGATATAGTTGAGATTGTTTTGCATACA 12 19586324 0.989172878 4 12 113 1 1.230448921 0.117647059 0.333333333 0.529411765 12 0 0 17 2L:19586280-19586343 7 11 278 FBgn0032814 191.6666667 11.32 17.29666667 0.057391304 0.971731449 0.635960686 1 1 1 0.2 dme-miR-8-3p 7mer-A1 AGTATTA 2L 19730291 19730297 + 2L_19730291_19730297_+ 0.757821278 0.813056568 0.785438923 0.039057255 Lar FBtr0331242|FBtr0112800|FBtr0331239|FBtr0331240|FBtr0081260|FBtr0331241|FBtr0305950 19730161|19730161|19730161|19730161|19730161|19730161|19730161 19732069|19732069|19731561|19731561|19731561|19731561|19731561 2L + 19730162 19730375 3'utr Lar FlyBase G5452.1 AGTGCATTTCTCAATGGGATTGCCAGGTCCACAGAGCTAAAATCTCATCGACCCTGCGTTCGTTGCATACTTATTTCGAACTCTACGCATAATACGCATTTACGATATACACGGATATCATAACTCTAAAGTATTATAGCCAGCTACTGCCCACACTTACTTAATACACCTATACTTATATACGTGGATATGTTTAGTTGATAAGCGCACCCCC 55 19730297 0.978948744 28 48 331 0.876923077 1.755874856 0.230769231 0.181818182 0.307692308 55 8 0 57 2L:19730162-19730375 7 Lar FBtr0305950|FBtr0081260|FBtr0331241|FBtr0331239|FBtr0331240|FBtr0331242|FBtr0112800 19730161|19730161|19730161|19730161|19730161|19730161|19730161 19731561|19731561|19731561|19731561|19731561|19732069|19732069 AGTATTA 7mer-A1 dme-miR-8-3p 2L + 19730161 19730331 stop_codon Lar FlyBase G4239.1 GAGTGCATTTCTCAATGGGATTGCCAGGTCCACAGAGCTAAAATCTCATCGACCCTGCGTTCGTTGCATACTTATTTCGAACTCTACGCATAATACGCATTTACGATATACACGGATATCATAACTCTAAAGTATTATAGCCAGCTACTGCCCACACTTACTTAATACACC 35 19730298 0.986041395 14 26 214 0.760869565 1.243038049 0.043478261 0.285714286 0.456521739 35 10 1 35 2L:19730161-19730331 7 24 279 FBgn0000464 569.28 8.026666667 12.27666667 0.042158516 2.990033223 1.954928048 -6 -7 -6.5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 19731199 19731204 + 2L_19731199_19731204_+ 0.961870613 0.934523351 0.948196982 0.019337391 Lar FBtr0331242|FBtr0112800|FBtr0331239|FBtr0331240|FBtr0081260|FBtr0331241|FBtr0305950 19730161|19730161|19730161|19730161|19730161|19730161|19730161 19732069|19732069|19731561|19731561|19731561|19731561|19731561 2L + 19731117 19731223 3'utr Lar FlyBase G5458.1 ATTCCTGTATATACCACAGTCGATACCCGAGCTAGCCACTTATGTATGTGTAATTTAGATTGAAAAGCTATGAAAAGTTATTGTACCTAAGGTGTATGAAGACATAG 35 19731198 0.898902249 8 33 235 0.95 1.278753601 0.425 0.142857143 0.25 35 1 1 38 2L:19731117-19731223 6 Lar FBtr0305950|FBtr0081260|FBtr0331241|FBtr0331239|FBtr0331240|FBtr0331242|FBtr0112800 19730161|19730161|19730161|19730161|19730161|19730161|19730161 19731561|19731561|19731561|19731561|19731561|19732069|19732069 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 19731122 19731226 3'utr Lar FlyBase G4244.1 TGTATATACCACAGTCGATACCCGAGCTAGCCACTTATGTATGTGTAATTTAGATTGAAAAGCTATGAAAAGTTATTGTACCTAAGGTGTATGAAGACATAGAGA 40 19731198 0.933378582 8 37 265 0.947368421 1.431363764 0.298245614 0.375 0.561403509 40 2 1 54 2L:19731122-19731226 6 25.5 280 FBgn0000464 569.28 8.026666667 12.27666667 0.044793423 3.176910299 2.077111051 1 1 1 0.2 dme-miR-1012-3p 7mer-m8 TTGACTA 2L 19736823 19736829 + 2L_19736823_19736829_+ 0.626406016 0.588304817 0.607355417 0.026941617 Nf-YB FBtr0081289|FBtr0343854 19736722|19736722 19737088|19736956 2L + 19736806 19736837 3'utr Nf-YB FlyBase G5466.1 CTAACAGTACACCTTGATTGACTATTTAAGTT 6 19736823 0.874956832 4 6 39 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2L:19736806-19736837 7 Nf-YB FBtr0343854|FBtr0081289 19736722|19736722 19736956|19737088 TTGACTA 7mer-m8 dme-miR-1012-3p 2L + 19736806 19736842 3'utr Nf-YB FlyBase G4249.1 CTAACAGTACACCTTGATTGACTATTTAAGTTAATAT 7 19736824 0.654809606 5 7 62 1 1.079181246 0.083333333 0.428571429 0.666666667 7 0 0 12 2L:19736806-19736842 7 6.5 281 FBgn0032816 140.6666667 20.89666667 32.17 0.046208531 0.311054395 0.202051601 0 -1 -0.5 0.2 dme-miR-276a-3p 6mer2-7 GTTCCT 2L 19743020 19743025 - 2L_19743020_19743025_- 0.850131758 0.873510177 0.861820968 0.016531025 CG10631 FBtr0081324 19742815 19743219 2L - 19742965 19743079 3'utr CG10631 FlyBase G11803.1 TCATAAGTGGCTTGTGAAGAAAAGATATGCCATACAAAGAAACAAACACAAAATGTTCCTTAAGTTTTTGTTTTTACTTATTATACATACGTACTTTAACTGTGAGATAAATGTG 20 19743026 0.963390161 9 19 110 0.964285714 1.130333768 0.035714286 0.25 0.464285714 20 0 1 27 2L:19742965-19743079 6 CG10631 FBtr0081324 19742815 19743219 GTTCCT 6mer2-7 dme-miR-276a-3p 2L - 19743016 19743079 3'utr CG10631 FlyBase G9074.1 TCATAAGTGGCTTGTGAAGAAAAGATATGCCATACAAAGAAACAAACACAAAATGTTCCTTAAG 14 19743026 0.943741751 6 14 56 1 1.255272505 0 0.285714286 0.444444444 14 0 0 18 2L:19743016-19743079 6 8.5 282 FBgn0032817 1456.62 14.47 22.22333333 0.005835427 0.587422253 0.382480876 1 1 1 0.2 dme-miR-79-3p 6mer3-8 TAGCTT 2L 1976453 1976458 - 2L_1976453_1976458_- 0.892310068 0.902033476 0.897171772 0.006875482 CG15356 FBtr0077869 1975461 1976541 2L - 1976393 1976511 3'utr CG15356 FlyBase G6884.1 AGAACGCACACACACACAGCAGACCCGGTTTGAATTAGATTTAGTTGGTAGTTTAGCTTGAATGTCGAAGGTTTTCCCACTAATTTCCAATTATCGCAACCCGCAGCCTTGGAGCAAAG 63 1976459 0.987509438 10 57 511 0.901408451 1.505149978 0.14084507 0.095238095 0.197183099 63 6 1 64 2L:1976393-1976511 6 CG15356 FBtr0077869 1975461 1976541 TAGCTT 6mer3-8 dme-miR-79-3p 2L - 1976438 1976508 3'utr CG15356 FlyBase G5380.1 ACGCACACACACACAGCAGACCCGGTTTGAATTAGATTTAGTTGGTAGTTTAGCTTGAATGTCGAAGGTTT 37 1976459 0.985148426 6 37 303 1 1.755874856 0.263157895 0.486486486 0.666666667 37 0 0 57 2L:1976438-1976508 6 28 283 FBgn0031377 219.9966667 6.103333333 9.273333333 0.127274656 4.587657018 3.019410496 1 1 1 0.2 dme-miR-970-3p 6mer2-7 CTTATG 2L 19793783 19793788 - 2L_19793783_19793788_- 1 0.999967727 0.999983863 2.28E-05 fs(2)ltoPP43 FBtr0332246|FBtr0081317 19793609|19793484 19794265|19794524 2L - 19793737 19793831 3'utr fs(2)ltoPP43 FlyBase G11855.1 AGTGTACTATTTGGAATCGTTTTAGGCAAATGTCTCTCATTACCTTATGTTCATAGAATTAATTAGCTATTAGATTAGAATAATTTACCCCCACA 23 19793801 0.990687535 11 20 204 0.884615385 1.06069784 0.192307692 0.130434783 0.230769231 23 2 1 23 2L:19793737-19793831 6 fs(2)ltoPP43 FBtr0081317|FBtr0332246 19793484|19793609 19794524|19794265 CTTATG 6mer2-7 dme-miR-970-3p 2L - 19793775 19793813 3'utr fs(2)ltoPP43 FlyBase G9106.1 GTTTTAGGCAAATGTCTCTCATTACCTTATGTTCATAGA 12 19793792 0.674375356 3 11 96 0.933333333 1.146128036 0.133333333 0.166666667 0.333333333 12 1 0 14 2L:19793775-19793813 6 12.5 284 FBgn0004811 606.5633333 48.93333333 75.4 0.020607906 0.255449591 0.165782493 13 4 8.5 0.2 "dme-miR-995-3p,dme-miR-998-3p" 7mer-A1 GGTGCTA 2L 19794454 19794460 - 2L_19794454_19794460_- 0.823142294 0.728096756 0.775619525 0.067207318 fs(2)ltoPP43 FBtr0081317 19793484 19794524 2L - 19794446 19794483 5'utr fs(2)ltoPP43 FlyBase G11858.1 TCTAAGCGGTGTGTCTGTGTGTCGGTGCTATGGGCGTA 9 19794453 0.82185157 5 8 70 0.909090909 1 0.363636364 0.222222222 0.363636364 9 1 0 10 2L:19794446-19794483 7 fs(2)ltoPP43 FBtr0081317 19793484 19794524 GGTGCTA 7mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 2L - 19794443 19794480 5'utr fs(2)ltoPP43 FlyBase G9108.1 AAGCGGTGTGTCTGTGTGTCGGTGCTATGGGCGTATCT 9 19794454 0.815659624 3 9 77 1 1.041392685 0.272727273 0.222222222 0.363636364 9 0 0 11 2L:19794443-19794480 7 9 285 FBgn0004811 606.5633333 48.93333333 75.4 0.014837692 0.183923706 0.119363395 -7 -6 -6.5 0.2 dme-bantam-3p 6mer3-8 TGATCT 2L 1984546 1984551 - 2L_1984546_1984551_- 0.984644234 0.910345993 0.947495114 0.052536761 Got2 FBtr0077867|FBtr0077868 1984510|1984510 1984705|1984705 2L - 1984520 1984617 3'utr Got2 FlyBase G6898.1 TGCGAAGTCTAGATAAGCCAATGCATTTTGCACACTCTCTATCCATATCTCTGTATATAAGCTAAATGATCTGCCTTTTAAAAAATAAAGCATTTAAA 290 1984551 0.780995854 17 275 2269 0.953168044 1.693978059 0.060606061 0.196551724 0.358126722 290 11 6 346 2L:1984520-1984617 6 Got2 FBtr0077867|FBtr0077868 1984510|1984510 1984705|1984705 TGATCT 6mer3-8 dme-bantam-3p 2L - 1984527 1984621 3'utr Got2 FlyBase G5386.1 AAATTGCGAAGTCTAGATAAGCCAATGCATTTTGCACACTCTCTATCCATATCTCTGTATATAAGCTAAATGATCTGCCTTTTAAAAAATAAAGC 163 1984551 0.796026987 18 155 1210 0.963709677 1.901276646 0.056451613 0.374233129 0.588709677 163 7 2 239 2L:1984527-1984621 6 207.5 286 FBgn0001125 531.6666667 41.34 63.08 0.390282132 5.019351717 3.289473684 0 0 0 0.2 dme-miR-8-3p 7mer-m8 CAGTATT 2L 20058264 20058270 - 2L_20058264_20058270_- 0.638161187 0.653273661 0.645717424 0.010686151 barr FBtr0081348|FBtr0343850|FBtr0081349 20058161|20058161|20058161 20058384|20058384|20058384 2L - 20058234 20058365 3'utr barr FlyBase G11864.2 AATTCATAGTTCTAGTTGCCCTTAAATGCTGTTACAATTTATTTTCACGGCTACTCCTTAATCTCTTACCTCTATTTTTAACTCCCAATTCGTATCAGTATTCTGAAACAGATATCCTCACCCCAGTCGAAT 86 20058271 0.74930785 14 80 686 0.940594059 1.977723605 0.00990099 0.151162791 0.277227723 86 6 0 95 2L:20058234-20058365 7 barr FBtr0081348|FBtr0343850|FBtr0081349 20058161|20058161|20058161 20058384|20058384|20058384 CAGTATT 7mer-m8 dme-miR-8-3p 2L - 20058240 20058288 3'utr barr FlyBase G9115.2 TTAACTCCCAATTCGTATCAGTATTCTGAAACAGATATCCTCACCCCAG 32 20058271 0.734508833 7 24 227 0.803921569 1.612783857 0.078431373 0.4375 0.647058824 32 10 0 41 2L:20058240-20058288 7 31 287 FBgn0014127 727.3466667 33.53666667 51.05 0.042620667 0.924361395 0.607247796 1 1 1 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 2L 20063986 20063991 + 2L_20063986_20063991_+ 0.999462507 0.999629566 0.999546037 0.000118158 lok FBtr0081330|FBtr0306234|FBtr0081328|FBtr0081329 20063974|20063184|20063974|20063974 20064378|20064378|20064381|20064381 2L + 20063966 20064021 stop_codon lok FlyBase G5497.1 GCGACGCTAGGTTTCGTTTCTGTGTTTCCATCGTTAATACGTGAGGGTCGAGGCGC 49 20063984 0.73622517 10 24 381 0.545454545 1.176091259 0.327272727 0.12244898 0.218181818 49 24 1 30 2L:20063966-20064021 6 lok FBtr0081328|FBtr0081329|FBtr0081330|FBtr0306234 20063974|20063974|20063974|20063184 20064381|20064381|20064378|20064378 TGTGTT 6mer3-8 dme-miR-317-3p 2L + 20063938 20064006 stop_codon lok FlyBase G4276.1 ACTTCCTTGAGCCACCCACCAAGCGATCGCGACGCTAGGTTTCGTTTCTGTGTTTCCATCGTTAATACG 24 20063983 0.997549566 5 9 143 0.342857143 1.079181246 0.285714286 0.416666667 0.6 24 23 0 12 2L:20063938-20064006 6 16.5 288 FBgn0019686 524.4266667 29.24666667 44.53333333 0.031462931 0.564166857 0.370508982 2 3 2.5 0.2 dme-miR-276a-3p 7mer-A1 GTTCCTA 2L 20073147 20073153 + 2L_20073147_20073153_+ 0.772243699 0.699409464 0.735826581 0.051501557 bwa FBtr0081331 20072671 20073719 2L + 20073118 20073170 3'utr bwa FlyBase G5504.1 AATTCATCCCATGACTTCCAGAACAAATGGTTCCTACGCTTTCCCAAAGAGAC 16 20073145 0.966319387 3 16 85 1 1.255272505 0.055555556 0.125 0.222222222 16 0 0 18 2L:20073118-20073170 7 bwa FBtr0081331 20072671 20073719 GTTCCTA 7mer-A1 dme-miR-276a-3p 2L + 20073097 20073166 3'utr bwa FlyBase G4282.1 GACTGTGATATGTTATGAACTAATTCATCCCATGACTTCCAGAACAAATGGTTCCTACGCTTTCCCAAAG 14 20073145 0.990700854 3 13 78 0.894736842 1.230448921 0.052631579 0.357142857 0.526315789 14 2 0 17 2L:20073097-20073166 7 13 289 FBgn0045064 300.39 20.15 30.82666667 0.043277073 0.64516129 0.421712803 2 2 2 0.2 dme-miR-283-5p 6mer3-8 TGATAT 2L 20073504 20073509 + 2L_20073504_20073509_+ 0.942793223 0.980364747 0.961578985 0.026567062 bwa FBtr0331184|FBtr0081331 20073453|20072671 20073719|20073719 2L + 20073484 20073521 3'utr bwa FlyBase G5505.1 AAACAGAGACATACACAGCGTGATATAAGTTAGAGTTG 15 20073510 0.906964008 3 11 80 0.65 1.113943352 0.25 0.266666667 0.45 15 7 0 13 2L:20073484-20073521 6 bwa FBtr0331184|FBtr0081331 20073453|20072671 20073719|20073719 TGATAT 6mer3-8 dme-miR-283-5p 2L + 20073488 20073523 3'utr bwa FlyBase G4283.1 AGAGACATACACAGCGTGATATAAGTTAGAGTTGCA 8 20073495 0.884015696 3 6 43 0.818181818 0.954242509 0.272727273 0.375 0.545454545 8 2 0 9 2L:20073488-20073523 6 11.5 290 FBgn0045064 300.39 20.15 30.82666667 0.038283565 0.570719603 0.373053633 -6 9 1.5 0.2 dme-miR-277-3p 6mer3-8 TGCATT 2L 20081774 20081779 - 2L_20081774_20081779_- 0.814736466 0.94951858 0.882127523 0.095305337 fok FBtr0310559 20081604 20082782 2L - 20081761 20081790 3'utr fok FlyBase G11884.1 GATTTAACAATTGCATTAGTCATTTAAGTA 6 20081775 0.743476026 3 6 50 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 2L:20081761-20081790 6 fok FBtr0310559 20081604 20082782 TGCATT 6mer3-8 dme-miR-277-3p 2L - 20081762 20081796 3'utr fok FlyBase G9128.1 AAAAACGATTTAACAATTGCATTAGTCATTTAAGT 6 20081775 0.69648804 4 6 51 1 1 0.4 0.333333333 0.6 6 0 0 10 2L:20081762-20081796 6 6 291 FBgn0263773 896.66 79.66 118.1266667 0.0066915 0.07532011 0.050792934 -4 -4 -4 0.2 dme-miR-1006-3p 6mer3-8 CGAATT 2L 20093153 20093158 - 2L_20093153_20093158_- 0.999995681 0.999980936 0.999988308 1.05E-05 Taf13 FBtr0081340 20093086 20093223 2L - 20093124 20093196 3'utr Taf13 FlyBase G11903.1 CCAGGTATAAGCCAAACCTAGCAGTTAGCTCCAAGATGCGAATTATTTTTAATGTCTTTAATACTCTAAGCTA 18 20093188 0.967328873 8 18 99 1 1.322219295 0.095238095 0.166666667 0.285714286 18 0 0 21 2L:20093124-20093196 6 Taf13 FBtr0081340 20093086 20093223 CGAATT 6mer3-8 dme-miR-1006-3p 2L - 20093139 20093195 3'utr Taf13 FlyBase G9139.1 CAGGTATAAGCCAAACCTAGCAGTTAGCTCCAAGATGCGAATTATTTTTAATGTCTT 7 20093169 0.987594947 5 6 45 0.777777778 0.84509804 0.222222222 0.285714286 0.444444444 7 2 0 7 2L:20093139-20093195 6 6.5 292 FBgn0032847 298 62.63 96.09 0.021812081 0.103784129 0.067644916 30 11 20.5 0.2 dme-bantam-3p 8mer-A1 TGATCTCA 2L 201860 201867 + 2L_201860_201867_+ 0.63046905 0.63047054 0.630469795 9.90E-07 spen FBtr0332336|FBtr0330653|FBtr0078123|FBtr0078121 201413|201413|201413|201413 203250|203250|203250|203397 2L + 201800 201890 3'utr spen FlyBase G618.3 TTATATAACTCTCCGTAATTAAAAACCTTAAAGAAAAAGCTTGCAAAGTATCGTTAAGTTTGATCTCAAGAAAGAATGTTTTATTTTTGCT 1179 201859 0.786842431 15 1148 9915 0.973856209 2.086036093 0.328976035 0.146734521 0.269426289 1179 26 10 1341 2L:201800-201890 8 spen FBtr0078123|FBtr0078121|FBtr0332336|FBtr0330653 201413|201413|201413|201413 203250|203397|203250|203250 TGATCTCA 8mer-A1 dme-bantam-3p 2L + 201788 201902 3'utr spen FlyBase G495.1 TGTCTAAATTAATTATATAACTCTCCGTAATTAAAAACCTTAAAGAAAAAGCTTGCAAAGTATCGTTAAGTTTGATCTCAAGAAAGAATGTTTTATTTTTGCTTATTTAAAAAGA 710 201859 0.986641201 16 680 5881 0.957364341 1.994756945 0.304263566 0.322535211 0.533914729 710 35 9 988 2L:201788-201902 8 935 293 FBgn0016977 7307.703333 43.43 66.34333333 0.127947175 21.52889708 14.09335276 1 1 1 0.2 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 20345095 20345102 + 2L_20345095_20345102_+ 0.614975713 0.613509298 0.614242506 0.001036901 spir FBtr0339234 20344661 20348386 2L + 20345071 20345114 3'utr spir FlyBase G5542.1 TGTATTTTTAACTTGACAAAAAATTACGCTTACAAACAAAATAA 84 20345094 0.833271381 4 81 387 0.98019802 1.995635195 0 0.166666667 0.306930693 84 2 0 99 2L:20345071-20345114 8 spir FBtr0339234 20344661 20348386 TACGCTTA 8mer-A1 dme-miR-965-3p 2L + 20345039 20345114 3'utr spir FlyBase G4304.1 TTTCTCGGCTGCCAATAATCGTATAAAAATAATGTATTTTTAACTTGACAAAAAATTACGCTTACAAACAAAATAA 57 20345094 0.946662175 4 56 242 1 1.908485019 0 0.263157895 0.481481481 57 0 0 81 2L:20345039-20345114 8 68.5 294 FBgn0003475 1306.356667 49.26 74.34 0.05243591 1.390580593 0.921442023 1 1 1 0.2 dme-miR-305-3p 6mer2-7 TGTGCC 2L 20346153 20346158 + 2L_20346153_20346158_+ 0.96925786 0.985210426 0.977234143 0.011280121 spir FBtr0339234 20344661 20348386 2L + 20346135 20346169 3'utr spir FlyBase G5543.1 AGCGTCGCGTCTGCTTCCTGTGCCTGCGCACTCGG 7 20346153 0.813906897 2 7 51 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 2L:20346135-20346169 6 spir FBtr0339234 20344661 20348386 TGTGCC 6mer2-7 dme-miR-305-3p 2L + 20346133 20346166 3'utr spir FlyBase G4305.1 AAAGCGTCGCGTCTGCTTCCTGTGCCTGCGCACT 5 20346153 0.708734623 2 5 35 1 0.84509804 0 0.4 0.571428571 5 0 0 7 2L:20346133-20346166 6 6 295 FBgn0003475 1306.356667 49.26 74.34 0.004592926 0.12180268 0.08071025 0 0 0 0.2 dme-bantam-3p 7mer-m8 TGATCTC 2L 20346351 20346357 + 2L_20346351_20346357_+ 0.57149918 0.637712714 0.604605947 0.046820015 spir FBtr0339234 20344661 20348386 2L + 20346335 20346375 3'utr spir FlyBase G5544.1 AACGTGCCCCTCGTGCTGATCTCGCCATCGCTGCTGTCCAG 15 20346351 0.773587931 2 14 98 0.933333333 1.146128036 0.266666667 0 0 15 1 0 14 2L:20346335-20346375 7 spir FBtr0339234 20344661 20348386 TGATCTC 7mer-m8 dme-bantam-3p 2L + 20346334 20346375 3'utr spir FlyBase G4306.1 AAACGTGCCCCTCGTGCTGATCTCGCCATCGCTGCTGTCCAG 7 20346350 0.728864804 3 7 41 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 2L:20346334-20346375 7 11 296 FBgn0003475 1306.356667 49.26 74.34 0.008420365 0.223304913 0.147968792 0 1 0.5 0.2 dme-miR-79-3p 6mer2-7 AGCTTT 2L 20347554 20347559 + 2L_20347554_20347559_+ 0.871990968 0.715556524 0.793773746 0.110615896 spir FBtr0339234|FBtr0306556|FBtr0081353|FBtr0081355|FBtr0301884|FBtr0081352 20344661|20347168|20347168|20347168|20347168|20347168 20348386|20348386|20348386|20348386|20348386|20348386 2L + 20347501 20347566 3'utr spir FlyBase G5548.1 ATCGTGTTAGTCTAGTGAATAAGCAGAGGAGAATACCGAGAATTCCTGGCTGAAGCTTTGTACATT 63 20347544 0.884710222 6 58 287 0.932432432 1.838849091 0.081081081 0.142857143 0.27027027 63 5 0 69 2L:20347501-20347566 6 spir FBtr0301884|FBtr0081352|FBtr0339234|FBtr0306556|FBtr0081353|FBtr0081355 20347168|20347168|20344661|20347168|20347168|20347168 20348386|20348386|20348386|20348386|20348386|20348386 AGCTTT 6mer2-7 dme-miR-79-3p 2L + 20347513 20347563 3'utr spir FlyBase G4309.1 TAGTGAATAAGCAGAGGAGAATACCGAGAATTCCTGGCTGAAGCTTTGTAC 26 20347543 0.816031972 6 23 118 0.840909091 1.568201724 0.295454545 0.5 0.704545455 26 7 0 37 2L:20347513-20347563 6 26.5 297 FBgn0003475 1306.356667 49.26 74.34 0.020285425 0.537961835 0.356470272 10 11 10.5 0.2 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 2L 20361281 20361288 + 2L_20361281_20361288_+ 0.606342149 0.600981085 0.603661617 0.003790799 RtGEF FBtr0302106 20360849 20361429 2L + 20361255 20361314 3'utr RtGEF FlyBase G5562.1 AAGATCAACAAACTCAACTCTGCAATTGGTGCTAAGCAGCGAACAAAGGAATCCAAAGTT 151 20361280 0.765162728 4 146 773 0.981707317 2.206825876 0.237804878 0.079470199 0.152439024 151 3 0 161 2L:20361255-20361314 8 RtGEF FBtr0302106 20360849 20361429 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 2L + 20361198 20361308 3'utr RtGEF FlyBase G4319.1 ATGTTTAAGAGAAAAGATTGATTTTTTGGTTGAACCATTGGCCACTGATTTCGTTTTAAGATCAACAAACTCAACTCTGCAATTGGTGCTAAGCAGCGAACAAAGGAATCC 109 20361280 0.963488341 8 107 556 0.967567568 2.252853031 0.210810811 0.495412844 0.702702703 109 6 0 179 2L:20361198-20361308 8 125.5 298 FBgn0015803 1414.776667 51.74333333 79.37666667 0.08870658 2.425433228 1.581069164 1 1 1 0.2 dme-miR-190-5p 6mer3-8 ACATAT 2L 20364642 20364647 + 2L_20364642_20364647_+ 0.705220419 0.930737851 0.817979135 0.159464954 RtGEF FBtr0081357|FBtr0112885|FBtr0336747|FBtr0081356 20364489|20364489|20360566|20364489 20365254|20365254|20365254|20365254 2L + 20364581 20364687 3'utr RtGEF FlyBase G5566.1 TCTTAGACACTTTTACTTTGCATCTTCGGGGGGCAGTGGGTCAATTACCAAAAAATTATCTACATATGGACTTTGTAATCGTATATGGATTGTATTTACCGAGTACT 178 20364647 0.892882906 16 178 1550 1 2.33243846 0.106976744 0.202247191 0.339534884 178 0 0 215 2L:20364581-20364687 6 RtGEF FBtr0081356|FBtr0336747|FBtr0112885|FBtr0081357 20364489|20360566|20364489|20364489 20365254|20365254|20365254|20365254 ACATAT 6mer3-8 dme-miR-190-5p 2L + 20364589 20364686 3'utr RtGEF FlyBase G4324.1 ACTTTTACTTTGCATCTTCGGGGGGCAGTGGGTCAATTACCAAAAAATTATCTACATATGGACTTTGTAATCGTATATGGATTGTATTTACCGAGTAC 134 20364647 0.880216575 11 130 1164 0.978723404 1.963787827 0.085106383 0.305970149 0.505319149 134 3 1 184 2L:20364589-20364686 6 119 299 FBgn0015803 1414.776667 51.74333333 79.37666667 0.084112216 2.29981318 1.49918112 -5 -5 -5 0.2 dme-miR-184-3p 6mer2-7 CCGTCC 2L 2043247 2043252 + 2L_2043247_2043252_+ 0.99973313 0.999988144 0.999860637 0.000180312 Su(dx) FBtr0339529|FBtr0077823|FBtr0077822|FBtr0077824|FBtr0334778 2043182|2043182|2043182|2043182|2043182 2043677|2044372|2044372|2044372|2043677 2L + 2043182 2043412 stop_codon Su(dx) FlyBase G1147.1 GAGTGGCAGTCGATTTGTGGTCGGTTTGTTGATTAATGTTTAATTCCAGTTAAGCGCCTGCTTTACCGTCCCCTCCCCCTTTCCATTTGACGACCACGTTGCGTTAAATAGTTACTGTTATTATTATTATTACATACGTATGTATTACTACTGTATACTGTAAACACGAAACACACACTTCTGTCTGTCTATTCCTATGTTCGCAACCGATATCACACGAGATATTTGTTA 522 2043245 0.978794256 37 507 3452 0.972580645 2.081347308 0.022580645 0.155172414 0.288709677 522 13 4 603 2L:2043182-2043412 6 Su(dx) FBtr0077824|FBtr0334778|FBtr0077823|FBtr0077822|FBtr0339529 2043182|2043182|2043182|2043182|2043182 2044372|2043677|2044372|2044372|2043677 CCGTCC 6mer2-7 dme-miR-184-3p 2L + 2043182 2043269 stop_codon Su(dx) FlyBase G903.2 GAGTGGCAGTCGATTTGTGGTCGGTTTGTTGATTAATGTTTAATTCCAGTTAAGCGCCTGCTTTACCGTCCCCTCCCCCTTTCCATTT 243 2043245 0.697044065 14 232 1494 0.943243243 1.940765436 0.008108108 0.386831276 0.597297297 243 18 3 349 2L:2043182-2043269 6 337.5 300 FBgn0003557 1814.713333 49.05333333 75.26666667 0.185979787 6.880266377 4.484056687 2 2 2 0.2 dme-miR-283-5p 8mer-m1 TGATATTT 2L 2043558 2043565 + 2L_2043558_2043565_+ 0.506898593 0.555591574 0.531245083 0.03443115 Su(dx) FBtr0339529|FBtr0077823|FBtr0077822|FBtr0077824|FBtr0334778 2043182|2043182|2043182|2043182|2043182 2043677|2044372|2044372|2044372|2043677 2L + 2043486 2043576 3'utr Su(dx) FlyBase G1148.1 TTAGGCATAATTTATCCACTGCATAACTCTCCTGTGTAAATTTAAGACAAAGTTTGATTGATTCGCTTCTGTTGATATTTCTTACGACCAT 50 2043552 0.729324422 15 47 489 0.926470588 1.799340549 0.132352941 0.28 0.470588235 50 5 0 63 2L:2043486-2043576 8 Su(dx) FBtr0077824|FBtr0334778|FBtr0077823|FBtr0077822|FBtr0339529 2043182|2043182|2043182|2043182|2043182 2044372|2043677|2044372|2044372|2043677 TGATATTT 8mer-m1 dme-miR-283-5p 2L + 2043488 2043568 3'utr Su(dx) FlyBase G904.1 AGGCATAATTTATCCACTGCATAACTCTCCTGTGTAAATTTAAGACAAAGTTTGATTGATTCGCTTCTGTTGATATTTCTT 28 2043552 0.98874498 14 28 259 1 1.643452676 0.068181818 0.428571429 0.636363636 28 0 0 44 2L:2043488-2043568 8 19 301 FBgn0003557 1814.713333 49.05333333 75.26666667 0.010469973 0.387333515 0.252435784 6 6 6 0.2 dme-miR-92b-3p 6mer2-7 TGCAAT 2L 2044324 2044329 + 2L_2044324_2044329_+ 0.695570804 0.679394968 0.687482886 0.011438018 Su(dx) FBtr0077823|FBtr0077822|FBtr0077824 2043182|2043182|2043182 2044372|2044372|2044372 2L + 2044298 2044382 3'utr Su(dx) FlyBase G1151.1 TATTAAATAGATTTTATTTAGTTTAATGCAATGTGTACTGTATTATATAAAATAAATGCAAAATTATTTAGTGATACACGGCCGA 23 2044331 0.976351797 11 20 237 0.928571429 1.414973348 0.285714286 0.217391304 0.357142857 23 2 0 26 2L:2044298-2044382 6 Su(dx) FBtr0077824|FBtr0077823|FBtr0077822 2043182|2043182|2043182 2044372|2044372|2044372 TGCAAT 6mer2-7 dme-miR-92b-3p 2L + 2044313 2044355 3'utr Su(dx) FlyBase G905.1 ATTTAGTTTAATGCAATGTGTACTGTATTATATAAAATAAATG 14 2044330 0.74261912 7 12 150 0.913043478 1.322219295 0.173913043 0.571428571 0.739130435 14 2 0 21 2L:2044313-2044355 6 15 302 FBgn0003557 1814.713333 49.05333333 75.26666667 0.008265768 0.305789617 0.199291408 -7 -6 -6.5 0.2 dme-miR-34-5p 7mer-A1 ACTGCCA 2L 20647246 20647252 + 2L_20647246_20647252_+ 0.734526854 0.713986523 0.724256688 0.014524256 CG2608 FBtr0081384 20646861 20647381 2L + 20647182 20647267 3'utr CG2608 FlyBase G5619.1 TGACAGCCTTGTATCGAGTGAGATTAGTTTTGTTGATTCAGATTAGTCACATGAAAGGTCTCTGACTGCCATGTAAATCATAAGTA 14 20647244 0.984343313 6 12 101 0.882352941 0.875061263 0.176470588 0.214285714 0.352941176 14 1 1 15 2L:20647182-20647267 7 CG2608 FBtr0081384 20646861 20647381 ACTGCCA 7mer-A1 dme-miR-34-5p 2L + 20647221 20647268 3'utr CG2608 FlyBase G4365.1 AGATTAGTCACATGAAAGGTCTCTGACTGCCATGTAAATCATAAGTAA 9 20647253 0.956937515 4 9 57 1 1.230448921 0.235294118 0.777777778 0.882352941 9 0 0 17 2L:20647221-20647268 7 9 303 FBgn0032870 618.86 51.52 79.05666667 0.014542869 0.174689441 0.113842392 2 -7 -2.5 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 2L 20730913 20730919 - 2L_20730913_20730919_- 0.51257228 0.513690868 0.513131574 0.00079097 CG9318 FBtr0081393|FBtr0335149 20730643|20730414 20730999|20730999 2L - 20730809 20730974 3'utr CG9318 FlyBase G12008.1 TGCGAATGTATTTTTGTATGTGTAGCCACAAATTTACACTTAAGCCTAATGTGTGTGTGATTTCTGCGCTGTGCGCCCGGCACAGACAGTTTTCTGTTTACTATAATTACGATTGATATGTGTATAATAACATATGTTTGTATCAGGCAAGGAACAGTGGAGTAAC 93 20730913 0.985962272 25 92 775 0.990740741 2.029383778 0.231481481 0.139784946 0.259259259 93 1 0 107 2L:20730809-20730974 7 CG9318 FBtr0081393|FBtr0335149 20730643|20730414 20730999|20730999 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 20730886 20730957 3'utr CG9318 FlyBase G9212.1 ATGTGTAGCCACAAATTTACACTTAAGCCTAATGTGTGTGTGATTTCTGCGCTGTGCGCCCGGCACAGACAG 67 20730913 0.987733209 12 65 588 0.962264151 2.008600172 0.160377358 0.432835821 0.641509434 67 4 0 102 2L:20730886-20730957 7 65 304 FBgn0032880 1856.426667 79.74 121.9 0.035013503 0.815149235 0.533223954 -6 -6 -6 0.2 dme-miR-278-3p 6mer3-8 CCCACC 2L 20738935 20738940 + 2L_20738935_20738940_+ 0.753372052 0.896433863 0.824902957 0.101159969 Fs(2)Ket FBtr0305587|FBtr0305586|FBtr0305585|FBtr0081392|FBtr0305584 20738901|20738901|20738901|20738901|20738901 20750941|20750941|20750941|20739764|20739764 2L + 20738895 20738969 stop_codon Fs(2)Ket FlyBase G5668.1 CGCAGTAGGCCACCTGCTAGAGGTTAATGTTTCTTCGCTTCCCACCAGACCCTCAAGATTGTGTGTAATGCAGTG 34 20738953 0.920342401 8 33 254 0.975609756 1.602059991 0.463414634 0.176470588 0.317073171 34 1 0 40 2L:20738895-20738969 6 Fs(2)Ket FBtr0305584|FBtr0081392|FBtr0305585|FBtr0305586|FBtr0305587 20738901|20738901|20738901|20738901|20738901 20739764|20739764|20750941|20750941|20750941 CCCACC 6mer3-8 dme-miR-278-3p 2L + 20738908 20738973 3'utr Fs(2)Ket FlyBase G4399.1 CTGCTAGAGGTTAATGTTTCTTCGCTTCCCACCAGACCCTCAAGATTGTGTGTAATGCAGTGAAAG 24 20738953 0.757483815 6 23 158 0.96969697 1.505149978 0.121212121 0.291666667 0.484848485 24 1 0 32 2L:20738908-20738973 6 19 305 FBgn0262743 4510.123333 82.11666667 125.5566667 0.004212745 0.231378121 0.151326094 -18 -18 -18 0.2 dme-miR-995-5p 6mer3-8 AATTCG 2L 20739317 20739322 + 2L_20739317_20739322_+ 0.960961465 0.964246353 0.962603909 0.002322775 Fs(2)Ket FBtr0305586|FBtr0305585|FBtr0081392|FBtr0305584 20738901|20738901|20738901|20738901 20750941|20750941|20739764|20739764 2L + 20739230 20739343 3'utr Fs(2)Ket FlyBase G5669.1 AAGTTTGTCCGATCTATTGTTGCTGTGCAACTTCTAAATGCTAAGACCACTTGTTTATAAAACTCCCTACCCACTAGCTGTAAGTTCAATTCGATCCACTGTTTCGACTCAATA 21 20739319 0.990909227 14 18 182 0.88 0.865301426 0.08 0.142857143 0.28 21 1 2 22 2L:20739230-20739343 6 Fs(2)Ket FBtr0305584|FBtr0081392|FBtr0305585|FBtr0305586 20738901|20738901|20738901|20738901 20739764|20739764|20750941|20750941 AATTCG 6mer3-8 dme-miR-995-5p 2L + 20739290 20739361 3'utr Fs(2)Ket FlyBase G4400.1 AACTCCCTACCCACTAGCTGTAAGTTCAATTCGATCCACTGTTTCGACTCAATATTTTAATTAAGGTCTGTT 11 20739332 0.991514087 6 10 112 0.928571429 1.113943352 0.285714286 0.272727273 0.428571429 11 1 0 13 2L:20739290-20739361 6 9.5 306 FBgn0262743 4510.123333 82.11666667 125.5566667 0.002106373 0.11568906 0.075663047 -2 -15 -8.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 20740044 20740050 + 2L_20740044_20740050_+ 0.762261907 0.75784947 0.760055688 0.003120038 Fs(2)Ket FBtr0305586|FBtr0305586|FBtr0305586|FBtr0305585|FBtr0305585|FBtr0305585 20738901|20738901|20738901|20738901|20738901|20738901 20750941|20750941|20750941|20750941|20750941|20750941 2L + 20739947 20740111 5'utr-coding Fs(2)Ket FlyBase G5673.1 TATGTACGTGGTATTTTGATTGCGACAAACCCCCGAAATGTTTGGAAACGGATGAGGATTCCCCCTTTCTGTGGCGCGCGTGTGCATCGGCGTGTTGTGTGATATTATGGATTAAGCGTAAGAACTTTTCTAGTGAAACGAATGATTTTAGACCTAAGCAAAACC 244 20740042 0.777988656 33 226 1966 0.929078014 2.117271296 0.460992908 0.118852459 0.237588652 244 19 1 262 2L:20739947-20740111 7 Fs(2)Ket FBtr0305585|FBtr0305585|FBtr0305585|FBtr0305586|FBtr0305586|FBtr0305586 20738901|20738901|20738901|20738901|20738901|20738901 20750941|20750941|20750941|20750941|20750941|20750941 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 20739895 20740106 5'utr-coding Fs(2)Ket FlyBase G4403.2 TACCCCTATGCCAATAGTTATGCTGTGATGGATGCTTGAGAGGAACTATGTCTATGTACGTGGTATTTTGATTGCGACAAACCCCCGAAATGTTTGGAAACGGATGAGGATTCCCCCTTTCTGTGGCGCGCGTGTGCATCGGCGTGTTGTGTGATATTATGGATTAAGCGTAAGAACTTTTCTAGTGAAACGAATGATTTTAGACCTAAGCA 159 20740042 0.986032248 32 146 1331 0.927419355 1.759667845 0.584677419 0.408805031 0.620967742 159 15 3 230 2L:20739895-20740106 7 114.5 307 FBgn0262743 4510.123333 82.11666667 125.5566667 0.025387332 1.394357621 0.911938832 2 2 2 0.2 dme-miR-932-5p 6mer3-8 GGAATT 2L 20749193 20749198 + 2L_20749193_20749198_+ 0.591630481 0.591699675 0.591665078 4.89E-05 Fs(2)Ket FBtr0305586 20738901 20750941 2L + 20749151 20749217 3'utr Fs(2)Ket FlyBase G5679.1 AAGGGAACATTTGTTTTATCAGATTCGAACATATCAGAAATTGGAATTTGAAATGGCAACTTGGAGC 6 20749196 0.974645763 5 6 42 1 0.903089987 0.625 0.166666667 0.375 6 0 0 8 2L:20749151-20749217 6 Fs(2)Ket FBtr0305586 20738901 20750941 GGAATT 6mer3-8 dme-miR-932-5p 2L + 20749160 20749224 3'utr Fs(2)Ket FlyBase G4410.1 TTTGTTTTATCAGATTCGAACATATCAGAAATTGGAATTTGAAATGGCAACTTGGAGCACTTGAT 5 20749192 0.988272988 4 4 41 0.8 0.903089987 0.5 0.8 0.9 5 2 0 8 2L:20749160-20749224 6 4 308 FBgn0262743 4510.123333 82.11666667 125.5566667 0.000886894 0.048711183 0.031858125 -3 1 -1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 20749805 20749810 + 2L_20749805_20749810_+ 0.992718172 0.999917798 0.996317985 0.005090886 Fs(2)Ket FBtr0305587|FBtr0305587|FBtr0305587|FBtr0305586|FBtr0305586|FBtr0305586|FBtr0305585|FBtr0305585|FBtr0305585 20738901|20738901|20738901|20738901|20738901|20738901|20738901|20738901|20738901 20750941|20750941|20750941|20750941|20750941|20750941|20750941|20750941|20750941 2L + 20749786 20749818 3'utr Fs(2)Ket FlyBase G5682.1 AAGAGTAGTGTGTTTGGAACTGTGACTGAGTAA 8 20749807 0.708485111 4 7 57 0.909090909 1 0 0.25 0.454545455 8 1 0 10 2L:20749786-20749818 6 Fs(2)Ket FBtr0305585|FBtr0305585|FBtr0305585|FBtr0305586|FBtr0305586|FBtr0305586|FBtr0305587|FBtr0305587|FBtr0305587 20738901|20738901|20738901|20738901|20738901|20738901|20738901|20738901|20738901 20750941|20750941|20750941|20750941|20750941|20750941|20750941|20750941|20750941 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 20749795 20749824 3'utr Fs(2)Ket FlyBase G4414.1 GTGTTTGGAACTGTGACTGAGTAAATTTGT 8 20749801 0.630032987 5 8 55 1 1 0 0.25 0.4 8 0 0 10 2L:20749795-20749824 6 8 309 FBgn0262743 4510.123333 82.11666667 125.5566667 0.001773787 0.097422367 0.06371625 -2 4 1 0.2 dme-miR-308-3p 8mer-m1 CTGTGATT 2L 20750127 20750134 + 2L_20750127_20750134_+ 0.3832662 0.384070987 0.383668594 0.00056908 Fs(2)Ket FBtr0305587|FBtr0305586|FBtr0305585 20738901|20738901|20738901 20750941|20750941|20750941 2L + 20750104 20750186 3'utr Fs(2)Ket FlyBase G5683.1 TAAAAACACAACTGTAACATTGCCTGTGATTCATTCGATCATCTGTGTGTGGAGTGTACGCTGTGTGAAAGACTTGTGTGGAT 58 20750124 0.98960313 8 51 500 0.848484848 1.271066772 0.03030303 0.120689655 0.227272727 58 8 2 56 2L:20750104-20750186 8 Fs(2)Ket FBtr0305585|FBtr0305586|FBtr0305587 20738901|20738901|20738901 20750941|20750941|20750941 CTGTGATT 8mer-m1 dme-miR-308-3p 2L + 20750108 20750145 3'utr Fs(2)Ket FlyBase G4416.1 AACACAACTGTAACATTGCCTGTGATTCATTCGATCAT 31 20750124 0.774842722 7 29 254 0.9375 1.653212514 0.0625 0.483870968 0.666666667 31 3 0 45 2L:20750108-20750145 8 43.5 310 FBgn0262743 4510.123333 82.11666667 125.5566667 0.009644969 0.529734118 0.346457111 3 3 3 0.2 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 2L 20788624 20788629 + 2L_20788624_20788629_+ 0.992094395 0.998926895 0.995510645 0.004831307 Pomp FBtr0081414 20788537 20789098 2L + 20788551 20788666 3'utr Pomp FlyBase G5710.1 GAAGTTGCTAAATGCCTGGCATTCAGCCTTTAAACTCTAAGACACTCTTAAGATCAGCAAATAAAATATATTTTGGTGCGACCAGCTAGAGGTAAACAAAATTCACCATTTCTTTG 42 20788623 0.706173228 19 39 254 0.886792453 1.070037867 0.113207547 0.238095238 0.396226415 42 3 3 47 2L:20788551-20788666 6 Pomp FBtr0081414 20788537 20789098 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 2L + 20788550 20788644 3'utr Pomp FlyBase G4437.1 TGAAGTTGCTAAATGCCTGGCATTCAGCCTTTAAACTCTAAGACACTCTTAAGATCAGCAAATAAAATATATTTTGGTGCGACCAGCTAGAGGTA 21 20788624 0.776688047 8 20 118 0.967741935 1.176091259 0.258064516 0.428571429 0.612903226 21 0 1 30 2L:20788550-20788644 6 13.5 311 FBgn0032884 886.4133333 100.35 153.2666667 0.015229915 0.134529148 0.088081775 1 0 0.5 0.2 dme-miR-31a-5p 6mer3-8 TCTTGC 2L 20813959 20813964 + 2L_20813959_20813964_+ 0.957863975 0.896975984 0.927419979 0.043054318 CG9328 FBtr0081416 20813711 20814331 2L + 20813656 20814022 stop_codon CG9328 FlyBase G5718.1 AATCCCGAGTATCTGAACGTGCGGGCCAAGCTGCGCACGGCGCACGCCAACAATTAAGGAGCAGCCCACTCGGATACCCCTCATCCTGTAATCCTCAGCCTATTTAATGTTTAGTTTTAGTAAGAGACCTAACCAAATTATGTGTAAGGAAACCATGTGTTTTATATGTTAACTTTGTGAGCGGTTTTCATTTTGATATTATGCAAAACTAGAGTTGATTATTATAATTAAAAATGTACACCTAGACTAAGCCATTTACTTGTTTAGTTTGTTAGTCCTTATCTCTAATCTAAGTTGAAGCTTTCTTGCGCTAAATTCGTTGTGTATAAACCAAGTGTATAAAGTTTTAGTTTCTAAAAGGACCCCA 257 20813961 0.987709092 60 244 2185 0.950331126 1.980760642 0.086092715 0.147859922 0.274834437 257 13 2 287 2L:20813656-20814022 6 CG9328 FBtr0081415|FBtr0081416 20813711|20813711 20814030|20814331 TCTTGC 6mer3-8 dme-miR-31a-5p 2L + 20813915 20813988 5'utr CG9328 FlyBase G4443.1 TTGTTTAGTTTGTTAGTCCTTATCTCTAATCTAAGTTGAAGCTTTCTTGCGCTAAATTCGTTGTGTATAAACCA 51 20813961 0.706274107 9 50 466 1 1.77815125 0.166666667 0.18 0.316666667 50 0 0 60 2L:20813915-20813988 6 56 312 FBgn0032886 2087.65 162.9466667 249.96 0.02682442 0.343670731 0.224035846 -2 -2 -2 0.2 dme-miR-932-5p 6mer2-7 GAATTG 2L 20871824 20871829 - 2L_20871824_20871829_- 0.963199454 0.951711508 0.957455481 0.008123243 sky FBtr0081443|FBtr0330257|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081447|FBtr0081444|FBtr0330256|FBtr0081441|FBtr0081442|FBtr0081446 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 2L - 20871789 20871845 3'utr sky FlyBase G12037.1 AAATTGTTTTCTATCTGAATTGTTCTCAATGTGTAGTTTATATACAATATCTTGATA 58 20871826 0.98340103 9 57 639 0.987179487 1.886490725 0.115384615 0.293103448 0.474358974 58 1 0 77 2L:20871789-20871845 6 sky FBtr0081442|FBtr0081447|FBtr0081446|FBtr0330256|FBtr0081444|FBtr0081441|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081443|FBtr0330257 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 GAATTG 6mer2-7 dme-miR-932-5p 2L - 20871786 20871840 3'utr sky FlyBase G9231.1 GTTTTCTATCTGAATTGTTCTCAATGTGTAGTTTATATACAATATCTTGATAAAT 34 20871826 0.990208216 6 34 344 1 1.755874856 0.105263158 0.411764706 0.649122807 34 0 0 57 2L:20871786-20871840 6 43 313 FBgn0032901 1773.08 43.72 66.94 0.024251585 0.983531565 0.642366298 -3 -3 -3 0.2 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 20872586 20872593 - 2L_20872586_20872593_- 0.630929248 0.631015276 0.630972262 6.09E-05 sky FBtr0081443|FBtr0330257|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081447|FBtr0081444|FBtr0330256|FBtr0081441|FBtr0081442|FBtr0081446 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 2L - 20872530 20872667 3'utr sky FlyBase G12041.1 ATTTTCAATACCAACGAAATTCTTTGCTCACCTCCACCTAAAAACTGCACGTACACAAAATTTTTGCACACTTTTCTAGTCAATTTTTATGTTTTACAAAAATAACATGGTGTGTCTCCTCCCATTTCCCTCTGGACG 186 20872594 0.914851519 22 176 1855 0.948717949 1.86923172 0.11965812 0.188172043 0.354700855 186 10 2 222 2L:20872530-20872667 8 sky FBtr0081442|FBtr0081447|FBtr0081446|FBtr0330256|FBtr0081444|FBtr0081441|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081443|FBtr0330257 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 20872526 20872625 3'utr sky FlyBase G9235.1 AACTGCACGTACACAAAATTTTTGCACACTTTTCTAGTCAATTTTTATGTTTTACAAAAATAACATGGTGTGTCTCCTCCCATTTCCCTCTGGACGAACA 138 20872594 0.990473723 17 133 1362 0.974358974 2.278753601 0.082051282 0.297101449 0.502564103 138 5 0 190 2L:20872526-20872625 8 141.5 314 FBgn0032901 1773.08 43.72 66.94 0.079804634 3.236505032 2.113833284 1 1 1 0.2 dme-bantam-3p 8mer-A1 TGATCTCA 2L 20872779 20872786 - 2L_20872779_20872786_- 0.580076446 0.580801461 0.580438953 0.000512723 sky FBtr0081443|FBtr0330257|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081447|FBtr0081444|FBtr0330256|FBtr0081441|FBtr0081442|FBtr0081446 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 2L - 20872764 20872844 3'utr sky FlyBase G12043.1 AAATAAGTTGAAGGAACGATTGGGCAGTGGAGAGCTGCCATGTGCCACCATGTGCAATTGATCTCAAAACGAAAAACGAAA 1074 20872787 0.830645749 11 1049 5578 0.979405034 1.932473765 0.439359268 0.175977654 0.324942792 1074 13 14 1284 2L:20872764-20872844 8 sky FBtr0081442|FBtr0081447|FBtr0081446|FBtr0330256|FBtr0081444|FBtr0081441|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081443|FBtr0330257 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 TGATCTCA 8mer-A1 dme-bantam-3p 2L - 20872766 20872872 3'utr sky FlyBase G9236.1 GCGGAATTTGTAGTCGGTTCAAAGTCCAAAATAAGTTGAAGGAACGATTGGGCAGTGGAGAGCTGCCATGTGCCACCATGTGCAATTGATCTCAAAACGAAAAACGA 647 20872787 0.963957029 13 634 3280 0.97718254 2.090346244 0.446428571 0.404945904 0.618055556 647 16 7 985 2L:20872766-20872872 8 842 315 FBgn0032901 1773.08 43.72 66.94 0.47487987 19.2589204 12.57842844 1 1 1 0.2 dme-miR-995-5p 6mer3-8 AATTCG 2L 20873117 20873122 - 2L_20873117_20873122_- 0.515140458 0.747348282 0.63124437 0.16419571 sky FBtr0081443|FBtr0330257|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081445|FBtr0081447|FBtr0081444|FBtr0330256|FBtr0081441|FBtr0081442|FBtr0081446 20871333|20871333|20871333|20871333|20871333|20872993|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 2L - 20873090 20873159 3'utr sky FlyBase G12045.1 TTTTTCTTTCTGTAAACCAAATTTACTGACTTGACTGAATTCGTTATTAATGTTATTAATATTATTATTG 97 20873132 0.983889909 10 91 844 0.933333333 1.748188027 0.041666667 0.18556701 0.341666667 97 7 1 112 2L:20873090-20873159 6 sky FBtr0081442|FBtr0081447|FBtr0081446|FBtr0330256|FBtr0081444|FBtr0081441|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081445|FBtr0081443|FBtr0330257 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20872993|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 AATTCG 6mer3-8 dme-miR-995-5p 2L - 20873104 20873177 3'utr sky FlyBase G9237.1 TTAATTTATGAAACTGTATTTTTCTTTCTGTAAACCAAATTTACTGACTTGACTGAATTCGTTATTAATGTTAT 64 20873132 0.66544607 13 62 539 0.975 1.414973348 0.0125 0.21875 0.375 64 0 2 78 2L:20873104-20873177 6 73.5 316 FBgn0032901 1773.08 43.72 66.94 0.04145329 1.68115279 1.097998207 10 10 10 0.2 dme-miR-283-5p 6mer2-7 GATATT 2L 20873720 20873725 - 2L_20873720_20873725_- 0.590375953 0.999620007 0.79499798 0.289379208 sky FBtr0081443|FBtr0330257|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081445|FBtr0081447|FBtr0081444|FBtr0330256|FBtr0081441|FBtr0081442|FBtr0081446 20871333|20871333|20871333|20871333|20871333|20872993|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 2L - 20873676 20873778 stop_codon sky FlyBase G12050.1 CTGGAAGTCTACGGATTCGTGGGCATCTAAAAACCTTCTTTCTTAGTCTGACCGATATTGCCCGCCGATGATCAAGTGCTCAGCAAAACTGCTCGACGTTCCC 25 20873736 0.978455624 13 25 169 1 1.505149978 0.03125 0.24 0.40625 25 0 0 32 2L:20873676-20873778 6 sky FBtr0081442|FBtr0081447|FBtr0081446|FBtr0330256|FBtr0081444|FBtr0081441|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081445|FBtr0081443|FBtr0330257 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20872993|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 GATATT 6mer2-7 dme-miR-283-5p 2L - 20873674 20873748 3'utr sky FlyBase G9243.1 AAACCTTCTTTCTTAGTCTGACCGATATTGCCCGCCGATGATCAAGTGCTCAGCAAAACTGCTCGACGTTCCCCC 13 20873735 0.830357217 8 12 70 0.952380952 1.301029996 0.19047619 0.384615385 0.619047619 13 1 0 20 2L:20873674-20873748 6 14.5 317 FBgn0032901 1773.08 43.72 66.94 0.00817786 0.331655993 0.216611891 11 10 10.5 0.2 dme-miR-304-5p 7mer-A1 GAGATTA 2L 20919169 20919175 - 2L_20919169_20919175_- 0.528599116 0.519319774 0.523959445 0.006561456 Mtp FBtr0081439 20919092 20919238 2L - 20919125 20919222 3'utr Mtp FlyBase G12065.1 TATTGGAGATTCCTTGCATAAAAACTATATTTCTATGTGAAAACTCAGAGATTAAGACTCGATATAGTTGTAAACTTAAACGAACAAAGACCATTTAA 50 20919171 0.982220912 9 46 337 0.93220339 1.439332694 0.271186441 0.18 0.305084746 50 3 1 55 2L:20919125-20919222 7 Mtp FBtr0081439 20919092 20919238 GAGATTA 7mer-A1 dme-miR-304-5p 2L - 20919131 20919198 3'utr Mtp FlyBase G9252.1 CTATATTTCTATGTGAAAACTCAGAGATTAAGACTCGATATAGTTGTAAACTTAAACGAACAAAGACC 22 20919171 0.977658197 5 21 141 0.965517241 1.447158031 0.413793103 0.272727273 0.448275862 22 1 0 28 2L:20919131-20919198 7 32.5 318 FBgn0266369 334.6733333 13.78 21.06333333 0.097109619 2.358490566 1.542965659 -4 -4 -4 0.2 dme-miR-184-3p 7mer-m8 TCCGTCC 2L 20965583 20965589 - 2L_20965583_20965589_- 0.567950322 0.580026125 0.573988223 0.00853888 CG42238 FBtr0290305|FBtr0331200|FBtr0331199|FBtr0290306 20965518|20965518|20965518|20965518 20967385|20967385|20967385|20967385 2L - 20965555 20965607 3'utr CG42238 FlyBase G12079.1 TACAAATTATTAACTGATTCCGTCCGCACCCTGACAACTGTGTTAACTAACTT 444 20965590 0.741900509 9 440 2489 0.99255121 2.425697213 0.009310987 0.177927928 0.320297952 444 3 1 533 2L:20965555-20965607 7 CG42238 FBtr0290306|FBtr0331199|FBtr0331200|FBtr0290305 20965518|20965518|20965518|20965518 20967385|20967385|20967385|20967385 TCCGTCC 7mer-m8 dme-miR-184-3p 2L - 20965549 20965606 3'utr CG42238 FlyBase G9257.1 ACAAATTATTAACTGATTCCGTCCGCACCCTGACAACTGTGTTAACTAACTTTAAGAT 230 20965590 0.963040554 7 227 1277 0.983651226 2.557507202 0 0.386956522 0.615803815 230 6 0 361 2L:20965549-20965606 7 335.5 319 FBgn0250867 324.93 11.38 17.49333333 1.032530083 29.48154657 19.17873476 1 1 1 0.2 dme-miR-14-3p 6mer2-7 AGACTG 2L 20965825 20965830 - 2L_20965825_20965830_- 0.984455371 0.999451851 0.991953611 0.010604127 CG42238 FBtr0290305|FBtr0331200|FBtr0331199|FBtr0290306 20965518|20965518|20965518|20965518 20967385|20967385|20967385|20967385 2L - 20965803 20965843 3'utr CG42238 FlyBase G12080.1 TCAAATCGCCTATAGACTGTAGCACTATAGCTAAAAGGTAT 10 20965832 0.955877721 2 10 51 1 1.113943352 0 0.3 0.461538462 10 0 0 13 2L:20965803-20965843 6 CG42238 FBtr0290306|FBtr0331199|FBtr0331200|FBtr0290305 20965518|20965518|20965518|20965518 20967385|20967385|20967385|20967385 AGACTG 6mer2-7 dme-miR-14-3p 2L - 20965811 20965848 3'utr CG42238 FlyBase G9258.1 AAACGTCAAATCGCCTATAGACTGTAGCACTATAGCTA 5 20965831 0.956116811 3 5 26 1 0.84509804 0 0.2 0.428571429 5 0 0 7 2L:20965811-20965848 6 7.5 320 FBgn0250867 324.93 11.38 17.49333333 0.023081895 0.659050967 0.428734756 2 1 1.5 0.2 dme-miR-14-3p 6mer3-8 AAGACT 2L 210153 210158 + 2L_210153_210158_+ 0.631297482 0.741537547 0.686417514 0.077951452 Tbc1d15-17 FBtr0332339|FBtr0332338|FBtr0078125 209857|209857|209857 210725|210506|210506 2L + 210116 210224 3'utr Tbc1d15-17 FlyBase G641.1 GTAAACAAAACATTGGAGCAGTGTTAGCTTAGACTATAAGACTTAAAGTTTACTCTCGCATCGAAGCTAAGCGAGGCGGGCCAAGCGGATACACTGATTTATATATTGT 33 210152 0.979907854 12 32 227 0.972972973 1.255272505 0.135135135 0.121212121 0.216216216 33 0 1 36 2L:210116-210224 6 Tbc1d15-17 FBtr0332338|FBtr0332339|FBtr0078125 209857|209857|209857 210506|210725|210506 AAGACT 6mer3-8 dme-miR-14-3p 2L + 210124 210175 3'utr Tbc1d15-17 FlyBase G513.1 AACATTGGAGCAGTGTTAGCTTAGACTATAAGACTTAAAGTTTACTCTCGCA 14 210151 0.733615063 6 14 96 1 1.301029996 0.2 0.428571429 0.6 14 0 0 20 2L:210124-210175 6 18 321 FBgn0031233 273.62 11.06666667 17.00333333 0.065784665 1.626506024 1.058615958 1 2 1.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 210427 210432 + 2L_210427_210432_+ 0.997772627 0.999998957 0.998885792 0.001574303 Tbc1d15-17 FBtr0332339|FBtr0332339|FBtr0332339|FBtr0332338|FBtr0332338|FBtr0332338|FBtr0078125|FBtr0078125|FBtr0078125 209857|209857|209857|209857|209857|209857|209857|209857|209857 210725|210725|210725|210506|210506|210506|210506|210506|210506 2L + 210410 210448 3'utr Tbc1d15-17 FlyBase G643.1 TTAAGTTTAGTCAATTACTGTGAATATACATCCGTATAC 16 210434 0.732856639 4 12 143 0.705882353 1.079181246 0.058823529 0.0625 0.117647059 16 5 0 12 2L:210410-210448 6 Tbc1d15-17 FBtr0332338|FBtr0332338|FBtr0332338|FBtr0332339|FBtr0332339|FBtr0332339|FBtr0078125|FBtr0078125|FBtr0078125 209857|209857|209857|209857|209857|209857|209857|209857|209857 210506|210506|210506|210725|210725|210725|210506|210506|210506 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 210412 210448 3'utr Tbc1d15-17 FlyBase G517.1 AAGTTTAGTCAATTACTGTGAATATACATCCGTATAC 12 210425 0.676549666 5 11 100 0.9375 1.176091259 0 0.25 0.4375 12 1 0 15 2L:210412-210448 6 14 322 FBgn0031233 273.62 11.06666667 17.00333333 0.05116585 1.265060241 0.823367967 -7 2 -2.5 0.2 dme-miR-34-5p 7mer-A1 ACTGCCA 2L 210572 210578 + 2L_210572_210578_+ 0.819736541 0.802895066 0.811315803 0.011908668 Tbc1d15-17 FBtr0332339 209857 210725 2L + 210555 210593 3'utr Tbc1d15-17 FlyBase G645.1 AATCCATCAAGAACTTGACTGCCATTTGTATTCGGGTGG 5 210569 0.960334428 2 5 35 1 0.77815125 0.666666667 0.2 0.333333333 5 0 0 6 2L:210555-210593 7 Tbc1d15-17 FBtr0332339 209857 210725 ACTGCCA 7mer-A1 dme-miR-34-5p 2L + 210559 210593 3'utr Tbc1d15-17 FlyBase G518.1 CATCAAGAACTTGACTGCCATTTGTATTCGGGTGG 5 210580 0.930714971 2 3 32 0.571428571 0.602059991 0.571428571 0.4 0.571428571 5 3 0 4 2L:210559-210593 7 4.5 323 FBgn0031233 273.62 11.06666667 17.00333333 0.016446166 0.406626506 0.264653989 3 -8 -2.5 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 2L 21103985 21103991 + 2L_21103985_21103991_+ 0.464192976 0.515513965 0.489853471 0.036289427 CG9257 FBtr0081465 21103925 21104321 2L + 21103851 21104023 stop_codon CG9257 FlyBase G5736.2 CTCATCGATCTTGCTACCAGTTTTCATCGCCATCGGGGCCTTTATACCACTGCTGTTCTGCCTCTGCAAGCTGTGATCCCCATCCGTTGCTCACTCAACGCTTTCGCCTGCGTTGGTTTCCTGCTTTGTGATTTTGTGATTTTGATAAAAGACTTAATTATATACTTATCGTT 218 21103991 0.988755642 36 196 2355 0.904411765 1.545837067 0.25 0.178899083 0.341911765 218 20 6 246 2L:21103851-21104023 7 CG9257 FBtr0081465 21103925 21104321 TGTGATT 7mer-m1 dme-miR-308-3p 2L + 21103884 21104029 stop_codon CG9257 FlyBase G4458.1 CGGGGCCTTTATACCACTGCTGTTCTGCCTCTGCAAGCTGTGATCCCCATCCGTTGCTCACTCAACGCTTTCGCCTGCGTTGGTTTCCTGCTTTGTGATTTTGTGATTTTGATAAAAGACTTAATTATATACTTATCGTTTAGTTC 167 21103983 0.879128559 31 159 1852 0.952380952 1.77815125 0.186507937 0.329341317 0.555555556 167 9 3 240 2L:21103884-21104029 7 143 324 FBgn0032916 272.05 21.3 32.82666667 0.525638669 6.713615023 4.35621446 -6 2 -2 0.2 dme-miR-34-5p 7mer-A1 ACTGCCA 2L 21136321 21136327 - 2L_21136321_21136327_- 0.821340973 0.820679722 0.821010347 0.00046761 Dap160 FBtr0333087|FBtr0333086 21135274|21135274 21137095|21137095 2L - 21136307 21136359 3'utr Dap160 FlyBase G12107.1 TGATTTATTGACTAAGTTAAGCGCTTATCTGAACTGCCATAACTGTATTAATT 49 21136330 0.795762379 7 47 358 0.962962963 1.238882089 0.111111111 0.040816327 0.12962963 49 0 2 52 2L:21136307-21136359 7 Dap160 FBtr0333086|FBtr0333087 21135274|21135274 21137095|21137095 ACTGCCA 7mer-A1 dme-miR-34-5p 2L - 21136306 21136352 3'utr Dap160 FlyBase G9277.1 TTGACTAAGTTAAGCGCTTATCTGAACTGCCATAACTGTATTAATTT 43 21136330 0.787847382 6 41 323 1 1.763427994 0.275862069 0.302325581 0.482758621 43 0 0 58 2L:21136306-21136352 7 44 325 FBgn0023388 1725.443333 51.01 78.44666667 0.025500693 0.862575965 0.560890626 3 3 3 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 2L 21137286 21137292 - 2L_21137286_21137292_- 0.5210787 0.52113058 0.52110464 3.67E-05 Dap160 FBtr0081504|FBtr0081503|FBtr0301276 21137129|21137129|21137129 21137476|21137476|21137476 2L - 21137180 21137376 5'utr Dap160 FlyBase G12110.1 AAGTTCTCGCCTATTCTCGCTATTGAAACCCCCACTTTAGTGTTTATTTGTTGCAATATTTCCAAGATGTATCTAATTGTTAATTGTGATTATTTAGTTTTTAGATTTACTCCTAAGCTTATCACTAGCGACCTCTCTATTTTCGCTTAGCTAATTTCTAGTGTTATTTCATTTATGTATTTATTTAGTCGGCATAA 81 21137293 0.995423466 30 71 1049 0.87628866 1.62838893 0.164948454 0.172839506 0.309278351 81 11 1 85 2L:21137180-21137376 7 Dap160 FBtr0301276|FBtr0081503|FBtr0081504 21137129|21137129|21137129 21137476|21137476|21137476 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 21137212 21137320 5'utr Dap160 FlyBase G9278.1 TATTTCCAAGATGTATCTAATTGTTAATTGTGATTATTTAGTTTTTAGATTTACTCCTAAGCTTATCACTAGCGACCTCTCTATTTTCGCTTAGCTAATTTCTAGTGTT 58 21137293 0.995472367 22 53 786 0.928571429 1.414973348 0.130952381 0.362068966 0.55952381 58 4 2 78 2L:21137212-21137320 7 45 326 FBgn0023388 1725.443333 51.01 78.44666667 0.026080254 0.882179965 0.573638141 1 1 1 0.2 dme-miR-276a-3p 7mer-A1 GTTCCTA 2L 21145189 21145195 - 2L_21145189_21145195_- 0.814569088 0.815393861 0.814981475 0.000583222 del FBtr0333085|FBtr0333084|FBtr0081502 21145135|21145135|21145135 21145298|21145298|21145298 2L - 21145177 21145216 3'utr del FlyBase G12127.1 AAATTAAGTTATCAAATTATTGTTCCTATTTGATTATTAC 47 21145197 0.729575614 9 46 557 0.963636364 1.72427587 0.036363636 0.170212766 0.290909091 47 2 0 53 2L:21145177-21145216 7 del FBtr0333084|FBtr0081502|FBtr0333085 21145135|21145135|21145135 21145298|21145298|21145298 GTTCCTA 7mer-A1 dme-miR-276a-3p 2L - 21145176 21145263 3'utr del FlyBase G9290.1 CTTGACATATATCATAATCTCTTCATTATTGATGCACATAATTGAATAAATTAAGTTATCAAATTATTGTTCCTATTTGATTATTACA 38 21145197 0.910733043 13 38 443 1 1.770852012 0.203389831 0.368421053 0.593220339 38 0 0 59 2L:21145176-21145263 7 39 327 FBgn0086251 92 3.553333333 5.473333333 0.423913043 10.97560976 7.12545676 2 2 2 0.2 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 21160797 21160802 - 2L_21160797_21160802_- 0.949147671 0.985150363 0.967149017 0.025457753 Nbr FBtr0081499 21160634 21161011 2L - 21160764 21160816 3'utr Nbr FlyBase G12152.1 ATCAGAAGGAAACTATGTGACTGCGAGCAGGATATGAAAGAATGAATTTTATT 55 21160801 0.715927094 7 55 225 1 1.785329835 0.213114754 0.109090909 0.196721311 55 0 0 61 2L:21160764-21160816 6 Nbr FBtr0081499 21160634 21161011 ATGTGA 6mer3-8 dme-miR-1003-3p 2L - 21160721 21160825 3'utr Nbr FlyBase G9309.1 ATGTTACAAATCAGAAGGAAACTATGTGACTGCGAGCAGGATATGAAAGAATGAATTTTATTACGTTATGATTTCAAGCTCACTGTATCTCCATACTTTAAATAC 76 21160800 0.756674088 11 74 396 0.975409836 1.774516966 0.172131148 0.434210526 0.647540984 76 2 1 119 2L:21160721-21160825 6 45.5 328 FBgn0032924 175.9366667 9.03 13.69333333 0.25861579 5.03875969 3.32278481 -1 -2 -1.5 0.2 dme-miR-7-5p 6mer2-7 TCTTCC 2L 21172700 21172705 + 2L_21172700_21172705_+ 0.989553092 0.999857348 0.99470522 0.00728617 Acon FBtr0300425|FBtr0346587|FBtr0343871 21172647|21172647|21172647 21173017|21173184|21173185 2L + 21172631 21172761 stop_codon Acon FlyBase G5785.1 AAGGAGCTGGCCCAGTAAATGGTCCTGGACCTACTTAAGACACCCAGTCAAGAAGCCTGATCCCAACCTTCTTCCTGTAGGTGAACACACTCAAATTCACAACGGAAGCAATCGAATTATGGTATTGTTAT 21 21172701 0.967201718 14 19 103 0.964285714 1.431363764 0.071428571 0.285714286 0.464285714 21 1 0 27 2L:21172631-21172761 6 Acon FBtr0081473|FBtr0346587|FBtr0343871|FBtr0300425 21172647|21172647|21172647|21172647 21172895|21173184|21173185|21173017 TCTTCC 6mer2-7 dme-miR-7-5p 2L + 21172668 21172740 3'utr Acon FlyBase G4492.2 AGACACCCAGTCAAGAAGCCTGATCCCAACCTTCTTCCTGTAGGTGAACACACTCAAATTCACAACGGAAGCA 16 21172711 0.965395777 7 11 58 0.681818182 1.176091259 0.136363636 0.375 0.545454545 16 7 0 15 2L:21172668-21172740 6 7 329 FBgn0010100 1510.516667 65.87 100.8933333 0.004634176 0.106269926 0.069380204 -1 -11 -6 0.2 dme-miR-305-3p 6mer3-8 ATGTGC 2L 21231411 21231416 + 2L_21231411_21231416_+ 0.98397817 0.931860691 0.957919431 0.036852638 CG8677 FBtr0346586|FBtr0331677 21231107|21231107 21232059|21231692 2L + 21231401 21231488 3'utr CG8677 FlyBase G5819.2 AGTTCCCTTTATGTGCTGTTACAGTTTAGCTAAATCAAGCATCAACTACTTTTAGTATTTTAATTTAGCTCTATATGATTTGAGCCCT 14 21231412 0.879832397 7 13 137 0.944444444 1.230448921 0.166666667 0.142857143 0.333333333 14 1 0 17 2L:21231401-21231488 6 CG8677 FBtr0346586|FBtr0331677 21231107|21231107 21232059|21231692 ATGTGC 6mer3-8 dme-miR-305-3p 2L + 21231392 21231486 3'utr CG8677 FlyBase G4522.1 ATTTAACTTAGTTCCCTTTATGTGCTGTTACAGTTTAGCTAAATCAAGCATCAACTACTTTTAGTATTTTAATTTAGCTCTATATGATTTGAGCC 16 21231412 0.909646223 7 15 159 0.958333333 1.361727836 0 0.375 0.583333333 16 1 0 23 2L:21231392-21231486 6 5 330 FBgn0026577 1892.863333 25.80333333 39.86666667 0.002641501 0.193773414 0.12541806 -1 -1 -1 0.2 dme-miR-8-3p 6mer2-7 AGTATT 2L 21231454 21231459 + 2L_21231454_21231459_+ 0.999673407 0.973073028 0.986373217 0.018809323 CG8677 FBtr0346586|FBtr0331677 21231107|21231107 21232059|21231692 2L + 21231401 21231488 3'utr CG8677 FlyBase G5819.2 AGTTCCCTTTATGTGCTGTTACAGTTTAGCTAAATCAAGCATCAACTACTTTTAGTATTTTAATTTAGCTCTATATGATTTGAGCCCT 14 21231452 0.879832397 7 13 137 0.944444444 1.230448921 0.166666667 0.142857143 0.333333333 14 1 0 17 2L:21231401-21231488 6 CG8677 FBtr0346586|FBtr0331677 21231107|21231107 21232059|21231692 AGTATT 6mer2-7 dme-miR-8-3p 2L + 21231392 21231486 3'utr CG8677 FlyBase G4522.1 ATTTAACTTAGTTCCCTTTATGTGCTGTTACAGTTTAGCTAAATCAAGCATCAACTACTTTTAGTATTTTAATTTAGCTCTATATGATTTGAGCC 16 21231452 0.909646223 7 15 159 0.958333333 1.361727836 0 0.375 0.583333333 16 1 0 23 2L:21231392-21231486 6 6.5 331 FBgn0026577 1892.863333 25.80333333 39.86666667 0.003433951 0.251905439 0.163043478 2 2 2 0.2 dme-miR-305-3p 7mer-m8 ATGTGCC 2L 21257941 21257947 + 2L_21257941_21257947_+ 0.669536008 0.643407104 0.656471556 0.018475922 Hr39 FBtr0081479|FBtr0081481 21257828|21257828 21259675|21259675 2L + 21257904 21257984 3'utr Hr39 FlyBase G5836.2 TTCTATAGATAAGATCCTTACTGTAAGTTCTGAAAACATGTGCCTAAAAACCAAAGCCACGATAGCAGTCACATCAGGCCC 21 21257942 0.906102357 8 19 101 0.913043478 1.322219295 0 0.095238095 0.173913043 21 2 0 21 2L:21257904-21257984 7 Hr39 FBtr0081480|FBtr0081481|FBtr0081479 21257828|21257828|21257828 21258196|21259675|21259675 ATGTGCC 7mer-m8 dme-miR-305-3p 2L + 21257914 21257972 3'utr Hr39 FlyBase G4533.1 AAGATCCTTACTGTAAGTTCTGAAAACATGTGCCTAAAAACCAAAGCCACGATAGCAGT 8 21257942 0.938136675 3 8 36 1 1.041392685 0 0.375 0.545454545 8 0 0 11 2L:21257914-21257972 7 10 332 FBgn0261239 651.04 19.10333333 29.40333333 0.015360039 0.523468854 0.340097495 -1 -1 -1 0.2 dme-miR-33-5p 8mer-A1 CAATGCAA 2L 21259641 21259648 + 2L_21259641_21259648_+ 0.575413161 0.575255614 0.575334388 0.00011144 Hr39 FBtr0081479|FBtr0081481 21257828|21257828 21259675|21259675 2L + 21259575 21259663 3'utr Hr39 FlyBase G5842.1 AAAACTCAATTTTGCTTTTAAATAAATTTAATAAGTAAAATTCAACAATAATTGATATACAATTGTCAATGCAATATTTTGTAATAAAA 13 21259640 0.991411029 3 13 135 1 1.146128036 0.142857143 0.076923077 0.142857143 13 0 0 14 2L:21259575-21259663 8 Hr39 FBtr0081481|FBtr0081479 21257828|21257828 21259675|21259675 CAATGCAA 8mer-A1 dme-miR-33-5p 2L + 21259624 21259664 3'utr Hr39 FlyBase G4537.1 AATTGATATACAATTGTCAATGCAATATTTTGTAATAAAAA 10 21259640 0.821326769 2 10 88 1 1.113943352 0 0.3 0.461538462 10 0 0 13 2L:21259624-21259664 8 10 333 FBgn0261239 651.04 19.10333333 29.40333333 0.015360039 0.523468854 0.340097495 1 1 1 0.2 dme-miR-305-5p 7mer-A1 GTACAAA 2L 21286198 21286204 - 2L_21286198_21286204_- 0.681090176 0.742197737 0.711643956 0.043209528 Mio FBtr0301461|FBtr0301459|FBtr0301457|FBtr0301460|FBtr0301464|FBtr0081524|FBtr0301458|FBtr0081525|FBtr0301462|FBtr0081527|FBtr0301463 21286076|21286076|21286079|21286076|21286076|21286076|21286076|21286076|21286076|21286076|21286076 21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291 2L - 21286182 21286236 3'utr Mio FlyBase G12195.2 AAATAATTTTTGCTAACTGCTCAGCACTAATTGTACAAAATGCCTGATGAGCATA 31 21286206 0.971763703 6 28 169 0.921052632 1.544068044 0.368421053 0.193548387 0.342105263 31 3 0 35 2L:21286182-21286236 7 Mio FBtr0081525|FBtr0301462|FBtr0081527|FBtr0301463|FBtr0081524|FBtr0301458|FBtr0301460|FBtr0301459|FBtr0301464|FBtr0301461|FBtr0301457 21286076|21286076|21286076|21286076|21286076|21286076|21286076|21286076|21286076|21286076|21286079 21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291|21286291 GTACAAA 7mer-A1 dme-miR-305-5p 2L - 21286179 21286215 3'utr Mio FlyBase G9342.1 CAGCACTAATTGTACAAAATGCCTGATGAGCATATTT 10 21286206 0.764914298 3 8 61 0.846153846 1.041392685 0.076923077 0.2 0.384615385 10 2 0 11 2L:21286179-21286215 7 19.5 334 FBgn0032940 1888.76 53.04 81.26333333 0.010324234 0.367647059 0.239960622 2 2 2 0.2 dme-miR-7-5p 7mer-A1 TCTTCCA 2L 21319125 21319131 + 2L_21319125_21319131_+ 0.796906387 0.762147865 0.779527126 0.024577971 crc FBtr0081512|FBtr0332001|FBtr0081513|FBtr0332002 21319056|21319056|21319056|21319056 21319527|21319527|21319527|21319527 2L + 21319086 21319133 3'utr crc FlyBase G5894.1 CGTCGTTTGCAAAGTTATTGTTATAGTTAAACCCAAGCCTCTTCCATA 7 21319103 0.930633238 4 6 58 0.888888889 0.602059991 0.222222222 0.285714286 0.444444444 7 0 1 8 2L:21319086-21319133 7 crc FBtr0081513|FBtr0332002|FBtr0081512|FBtr0332001 21319056|21319056|21319056|21319056 21319527|21319527|21319527|21319527 TCTTCCA 7mer-A1 dme-miR-7-5p 2L + 21319004 21319135 stop_codon crc FlyBase G4578.1 ATGCGCTATCTGCGCCAGCTGATTCGAGAGTTCTACCATGAACGCAAGCGCTAGGCTTTATTTTCTTTGAAATCAATTTTATCGTCGTTTGCAAAGTTATTGTTATAGTTAAACCCAAGCCTCTTCCATAAA 27 21319103 0.877541477 19 24 227 0.771428571 1.431363764 0.057142857 0.148148148 0.342857143 27 8 0 27 2L:21319004-21319135 7 3 335 FBgn0000370 8504.88 510.09 782.7766667 0.000352739 0.005881315 0.003832511 22 22 22 0.2 dme-miR-318-3p 6mer2-7 CCAGTG 2L 21319285 21319290 + 2L_21319285_21319290_+ 0.979296588 0.923822416 0.951559502 0.039226183 crc FBtr0081512|FBtr0332001|FBtr0081513|FBtr0332002 21319056|21319056|21319056|21319056 21319527|21319527|21319527|21319527 2L + 21319146 21319340 3'utr crc FlyBase G5895.1 TCATAATGTTTCAATGTAATACTATCAATAACAATCTCCGGGTTGCCCAAAATCTACAAATCACCAAAGTACGCAGCCTGTCCTTTGTCCTACATTTTTGGCACTAATGACGAGTCTCTGAATTCGGAAATATTTGTTGCCAGTGGGGCCTAAAGGCGACCCCATATCCCAAGCAGCACGGTCCAATGTAAAAAC 62 21319280 0.97814563 23 57 379 0.927536232 1.505149978 0.202898551 0.112903226 0.202898551 62 4 1 64 2L:21319146-21319340 6 crc FBtr0081513|FBtr0332002|FBtr0081512|FBtr0332001 21319056|21319056|21319056|21319056 21319527|21319527|21319527|21319527 CCAGTG 6mer2-7 dme-miR-318-3p 2L + 21319242 21319337 3'utr crc FlyBase G4580.1 TTTGGCACTAATGACGAGTCTCTGAATTCGGAAATATTTGTTGCCAGTGGGGCCTAAAGGCGACCCCATATCCCAAGCAGCACGGTCCAATGTAAA 24 21319279 0.901642514 10 22 140 0.875 1.544068044 0.175 0.416666667 0.65 24 5 0 35 2L:21319242-21319337 6 15 336 FBgn0000370 8504.88 510.09 782.7766667 0.001763693 0.029406575 0.019162554 5 6 5.5 0.2 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2L 21356913 21356918 + 2L_21356913_21356918_+ 0.809902254 0.884295239 0.847098746 0.052603724 Tsp39D FBtr0273404 21356804 21358271 2L + 21356898 21356965 3'utr Tsp39D FlyBase G5903.1 TATTTTACATGCCCATTGAAGGCTGATTATCTTATTTATAACTAGATATATTATATTAATTTAATTTA 68 21356914 0.811831203 14 63 602 0.933333333 1.367976785 0.026666667 0.102941176 0.186666667 68 3 2 70 2L:21356898-21356965 6 Tsp39D FBtr0273404 21356804 21358271 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2L + 21356856 21356940 3'utr Tsp39D FlyBase G4584.1 GCTTCACAAGAACTATTACAAAAATGAAATCACAAAATATTCTATTTTACATGCCCATTGAAGGCTGATTATCTTATTTATAACT 50 21356914 0.979807676 7 43 410 0.861111111 1.315270435 0.027777778 0.36 0.555555556 50 8 2 62 2L:21356856-21356940 6 52.5 337 FBgn0032943 321.6666667 16.54333333 25.32333333 0.163212435 3.17348378 2.073186784 -1 -1 -1 0.2 dme-miR-14-3p 7mer-A1 AGACTGA 2L 21357475 21357481 + 2L_21357475_21357481_+ 0.791755169 0.784116219 0.787935694 0.005401589 Tsp39D FBtr0273404 21356804 21358271 2L + 21357452 21357489 3'utr Tsp39D FlyBase G5907.1 TTAAAACATTTCTTTAGAATTCGAGACTGAATGACATA 12 21357471 0.788036854 4 11 79 0.9375 1.176091259 0.3125 0.25 0.4375 12 1 0 15 2L:21357452-21357489 7 Tsp39D FBtr0273404 21356804 21358271 AGACTGA 7mer-A1 dme-miR-14-3p 2L + 21357462 21357487 3'utr Tsp39D FlyBase G4588.1 TCTTTAGAATTCGAGACTGAATGACA 5 21357465 0.634183922 3 4 30 1 1.079181246 0.333333333 0.6 0.833333333 5 0 0 12 2L:21357462-21357487 7 8.5 338 FBgn0032943 321.6666667 16.54333333 25.32333333 0.02642487 0.513802136 0.335658813 4 10 7 0.2 dme-bantam-3p 6mer3-8 TGATCT 2L 21357585 21357590 + 2L_21357585_21357590_+ 0.924771042 0.86763863 0.896204836 0.040398707 Tsp39D FBtr0273404 21356804 21358271 2L + 21357555 21357606 3'utr Tsp39D FlyBase G5908.1 CGGAACCAAAACATTATCAAATAAAACTAATGATCTGTAAAAATATTTGTAT 24 21357585 0.962892583 4 24 125 1 1.505149978 0 0.25 0.4375 24 0 0 32 2L:21357555-21357606 6 Tsp39D FBtr0273404 21356804 21358271 TGATCT 6mer3-8 dme-bantam-3p 2L + 21357567 21357597 3'utr Tsp39D FlyBase G4589.1 ATTATCAAATAAAACTAATGATCTGTAAAAA 9 21357585 0.731309113 2 9 48 1 1 0 0.111111111 0.2 9 0 0 10 2L:21357567-21357597 6 16 339 FBgn0032943 321.6666667 16.54333333 25.32333333 0.049740933 0.967156962 0.631828353 0 0 0 0.2 dme-miR-282-5p 6mer2-7 GAGGCT 2L 21358089 21358094 + 2L_21358089_21358094_+ 0.992306549 0.861892034 0.927099291 0.092216977 Tsp39D FBtr0273404 21356804 21358271 2L + 21358030 21358108 3'utr Tsp39D FlyBase G5912.1 ATATACCTAAATATATCGAATTTACAATTTTCATATCGACTTATATGTAGATTAACTTCGAGGCTTTACAATAAAACAA 43 21358095 0.985229093 6 41 339 0.960784314 1.389166084 0.019607843 0.11627907 0.254901961 43 1 1 49 2L:21358030-21358108 6 Tsp39D FBtr0273404 21356804 21358271 GAGGCT 6mer2-7 dme-miR-282-5p 2L + 21358066 21358106 3'utr Tsp39D FlyBase G4590.1 CGACTTATATGTAGATTAACTTCGAGGCTTTACAATAAAAC 28 21358095 0.781068908 4 27 222 0.97826087 1.653212514 0 0.392857143 0.630434783 28 1 0 45 2L:21358066-21358106 6 35 340 FBgn0032943 321.6666667 16.54333333 25.32333333 0.10880829 2.115655853 1.382124523 -6 -6 -6 0.2 dme-miR-7-5p 7mer-A1 TCTTCCA 2L 2156563 2156569 - 2L_2156563_2156569_- 0.823122075 0.82286982 0.822995947 0.000178403 aop FBtr0077850|FBtr0330658|FBtr0077851 2156482|2156482|2156482 2158164|2158164|2158164 2L - 2156518 2156786 3'utr aop FlyBase G6954.1 TTGAAGCACTTTATTAATTACATTAAACGGAATGAACAGAGTTAGGAGAAGATATCATCGCTGCACGTTCATACAATTAGCCTGTAGTGCAACTGTAATTATTAATTATTGTGTAGATCTACGCTAAAGTTAATTTTCTATTTGTTTTTCGTACGCCTTAAGTTTAAACACCGCCAATAGCTAATAATTAGCACTCTAGTGTCGCCACAATACCTGTTCTTCCATTGAAAACGTTATCTTTCGATCAATACATAATTTATATATGTATA 166 2156570 0.986510365 32 163 1204 0.984615385 1.982271233 0.179487179 0.138554217 0.266666667 166 2 1 192 2L:2156518-2156786 7 aop FBtr0077851|FBtr0330658|FBtr0077850 2156482|2156482|2156482 2158164|2158164|2158164 TCTTCCA 7mer-A1 dme-miR-7-5p 2L - 2156529 2156643 3'utr aop FlyBase G5437.1 GTTTTTCGTACGCCTTAAGTTTAAACACCGCCAATAGCTAATAATTAGCACTCTAGTGTCGCCACAATACCTGTTCTTCCATTGAAAACGTTATCTTTCGATCAATACATAATTT 76 2156570 0.776862656 17 76 540 1 2.033423755 0.12037037 0.368421053 0.555555556 76 0 0 108 2L:2156529-2156643 7 91 341 FBgn0000097 634.18 16.10666667 24.79666667 0.143492384 5.649834437 3.669848098 1 1 1 0.2 dme-miR-980-5p 8mer-A1 GAAAAACA 2L 2157057 2157064 - 2L_2157057_2157064_- 0.42853739 0.458091823 0.443314606 0.020898117 aop FBtr0077850|FBtr0330658|FBtr0330659|FBtr0077851 2156482|2156482|2156790|2156482 2158164|2158164|2158164|2158164 2L - 2156970 2157134 5'utr aop FlyBase G6955.2 AAAGAGCTTTCAAAATTCAATTTCAATTGAGCCCCTAGCCCTAGATACACTGCAACAAGAAACACGGATAGAAAAACATTGGCTTCCATTTTAATATAGCAATGATGATACACACAAGCATATATGTATACACATTAGTTTTCTATTGCTCTTAATTTTATTTTT 110 2157056 0.983029803 15 107 858 0.976377953 2.093421685 0.165354331 0.127272727 0.244094488 110 3 0 124 2L:2156970-2157134 8 aop FBtr0330659|FBtr0077851|FBtr0330658|FBtr0077850 2156790|2156482|2156482|2156482 2158164|2158164|2158164|2158164 GAAAAACA 8mer-A1 dme-miR-980-5p 2L - 2156966 2157077 5'utr aop FlyBase G5440.1 AGAAACACGGATAGAAAAACATTGGCTTCCATTTTAATATAGCAATGATGATACACACAAGCATATATGTATACACATTAGTTTTCTATTGCTCTTAATTTTATTTTTATTA 76 2157056 0.985104175 11 75 616 0.990291262 2.008600172 0.281553398 0.289473684 0.475728155 76 1 0 102 2L:2156966-2157077 8 76.5 342 FBgn0000097 634.18 16.10666667 24.79666667 0.120628213 4.749586093 3.085092082 -8 -8 -8 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 2157269 2157275 - 2L_2157269_2157275_- 0.800979887 0.800843633 0.80091176 9.64E-05 aop FBtr0077850|FBtr0077850|FBtr0077850|FBtr0330658|FBtr0330658|FBtr0330658|FBtr0330659|FBtr0330659|FBtr0330659|FBtr0077851|FBtr0077851|FBtr0077851 2156482|2156482|2156482|2156482|2156482|2156482|2156790|2156790|2156790|2156482|2156482|2156482 2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164 2L - 2157214 2157287 5'utr aop FlyBase G6956.1 AAATTGATTTCGTGTGATAACAACAGAATTATCTTTGATTCACATTGGCTGAATGCTAACGAAACCAGAGCAGT 12 2157282 0.977306607 11 12 78 1 1.255272505 0.055555556 0.333333333 0.555555556 12 0 0 18 2L:2157214-2157287 7 aop FBtr0330659|FBtr0330659|FBtr0330659|FBtr0077851|FBtr0077851|FBtr0077851|FBtr0330658|FBtr0330658|FBtr0330658|FBtr0077850|FBtr0077850|FBtr0077850 2156790|2156790|2156790|2156482|2156482|2156482|2156482|2156482|2156482|2156482|2156482|2156482 2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 2157222 2157288 5'utr aop FlyBase G5442.1 CAAATTGATTTCGTGTGATAACAACAGAATTATCTTTGATTCACATTGGCTGAATGCTAACGAAACC 14 2157283 0.98809634 8 11 102 0.833333333 0.698970004 0.166666667 0.5 0.708333333 14 1 3 20 2L:2157222-2157288 7 10 343 FBgn0000097 634.18 16.10666667 24.79666667 0.015768394 0.620860927 0.403280011 7 8 7.5 0.2 dme-miR-305-3p 8mer-A1 ATGTGCCA 2L 2157603 2157610 - 2L_2157603_2157610_- 0.611966997 0.612363557 0.612165277 0.000280439 aop FBtr0077850|FBtr0330660|FBtr0330658|FBtr0330659|FBtr0077851 2156482|2157425|2156482|2156790|2156482 2158164|2158164|2158164|2158164|2158164 2L - 2157588 2157859 3'utr aop FlyBase G6958.1 AATTCAATTCTTGATCAAAGGCTTCTTCTAACCATTGCTGCTTTATACTTTCTTTGCGGCTGTCAAACGACCTTTCCGACTTTCTGTACATAGAAATCACATCTGCATAAACCAACAAACAATCATACATAAATACATTTATTTTATACATCAAGCGTATTTATTAAGCTAAGCTAAGCAAGAGCAGAGTGCATGTAATTTCGTTGTTGTAAGTAGATTTCTTGAGCCGGCGCAGCGCAGCCTTCGATTATGTGCCAATTTCTACATTTATC 54 2157611 0.985471234 31 49 409 0.869565217 1.477121255 0.202898551 0.148148148 0.333333333 54 8 1 60 2L:2157588-2157859 8 aop FBtr0330659|FBtr0077851|FBtr0330660|FBtr0330658|FBtr0077850 2156790|2156482|2157425|2156482|2156482 2158164|2158164|2158164|2158164|2158164 ATGTGCCA 8mer-A1 dme-miR-305-3p 2L - 2157584 2157694 3'utr aop FlyBase G5445.1 AAGCTAAGCTAAGCAAGAGCAGAGTGCATGTAATTTCGTTGTTGTAAGTAGATTTCTTGAGCCGGCGCAGCGCAGCCTTCGATTATGTGCCAATTTCTACATTTATCAAAC 32 2157637 0.965322325 13 30 157 0.976190476 1.311753861 0.166666667 0.28125 0.452380952 32 0 1 41 2L:2157584-2157694 8 9 344 FBgn0000097 634.18 16.10666667 24.79666667 0.014191554 0.558774834 0.36295201 1 27 14 0.2 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 2L 2158088 2158094 - 2L_2158088_2158094_- 0.690321016 0.686794031 0.688557524 0.002493966 aop FBtr0077850|FBtr0330660|FBtr0330658|FBtr0330659|FBtr0077851 2156482|2157425|2156482|2156790|2156482 2158164|2158164|2158164|2158164|2158164 2L - 2157949 2158132 3'utr aop FlyBase G6959.1 ACATCCATCTTCCACTCCCTCCTGAACACACACAACATTACCTGAGCTAAATAATGTGGGACCAGCACAACAAGCGCACAGACACATAGACAGACACTCTGCTGGATAAAATTCTGGATGCCTTTCGGTTAGGATGGGTCGCTTAGAATGCAATCGAAACGGAAAACTCATTATTGAAGATTGT 415 2158095 0.99054615 24 393 1572 0.943248532 1.382017043 0.113502935 0.180722892 0.334637965 415 10 19 482 2L:2157949-2158132 7 aop FBtr0330659|FBtr0077851|FBtr0330660|FBtr0330658|FBtr0077850 2156790|2156482|2157425|2156482|2156482 2158164|2158164|2158164|2158164|2158164 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2L - 2158020 2158213 stop_codon aop FlyBase G5448.1 TTGCAATGGCGGCGAGTCGGAGGACTCCTTCCGACACATGCAGCAGTAGGAGGAGAAGTGTCCTGAGACAATCACCGCACTACATCCATCTTCCACTCCCTCCTGAACACACACAACATTACCTGAGCTAAATAATGTGGGACCAGCACAACAAGCGCACAGACACATAGACAGACACTCTGCTGGATAAAATT 228 2158095 0.977614159 18 212 806 0.949295775 2.050508646 0.098591549 0.399122807 0.614084507 228 16 2 337 2L:2158020-2158213 7 182 345 FBgn0000097 634.18 16.10666667 24.79666667 0.286984768 11.29966887 7.339696196 1 1 1 0.2 dme-miR-14-3p 6mer3-8 AAGACT 2L 21614804 21614809 - 2L_21614804_21614809_- 0.833569535 0.651511387 0.742540461 0.128734517 CG2201 FBtr0305503|FBtr0085922|FBtr0085921|FBtr0345685|FBtr0085923 21614230|21614764|21614764|21614764|21614764 21614977|21614977|21614977|21614977|21614977 2L - 21614790 21614823 3'utr CG2201 FlyBase G12226.1 TCGAACTACTTTAAAAGACTATTAAAATTTGTAA 12 21614802 0.679622164 4 11 80 0.947368421 1.255272505 0.263157895 0.333333333 0.578947368 12 1 0 18 2L:21614790-21614823 6 CG2201 FBtr0085923|FBtr0085921|FBtr0345685|FBtr0305503|FBtr0085922 21614764|21614764|21614764|21614230|21614764 21614977|21614977|21614977|21614977|21614977 AAGACT 6mer3-8 dme-miR-14-3p 2L - 21614795 21614823 3'utr CG2201 FlyBase G9363.1 TCGAACTACTTTAAAAGACTATTAAAATT 11 21614802 0.703262973 3 9 73 0.833333333 0.698970004 0 0.090909091 0.166666667 11 1 1 10 2L:21614795-21614823 6 11.5 346 FBgn0032955 595.71 31.05 47.65333333 0.019304695 0.37037037 0.241326245 -7 -7 -7 0.2 dme-miR-980-3p 7mer-A1 GCAGCTA 2L 21647196 21647202 + 2L_21647196_21647202_+ 0.821890941 0.821485807 0.821688374 0.000286449 Ac3 FBtr0085897 21646824 21647964 2L + 21647167 21647216 3'utr Ac3 FlyBase G5933.1 AGCTCTGTAATATTTAAGTGATTCGCTTTGCAGCTAATTGATGTGCAGAT 62 21647194 0.78478928 6 59 620 0.955882353 1.511883361 0.352941176 0.080645161 0.161764706 62 2 1 65 2L:21647167-21647216 7 Ac3 FBtr0085897 21646824 21647964 GCAGCTA 7mer-A1 dme-miR-980-3p 2L + 21647170 21647216 3'utr Ac3 FlyBase G4606.1 TCTGTAATATTTAAGTGATTCGCTTTGCAGCTAATTGATGTGCAGAT 41 21647193 0.796142289 5 41 432 1 1.755874856 0.333333333 0.268292683 0.473684211 41 0 0 57 2L:21647170-21647216 7 51.5 347 FBgn0023416 614.5733333 23.08666667 35.21333333 0.083797974 2.230724805 1.462514199 2 3 2.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2L 21664320 21664326 - 2L_21664320_21664326_- 0.823349316 0.823342057 0.823345686 5.09E-06 CG2225 FBtr0085917|FBtr0304885|FBtr0085915|FBtr0085914|FBtr0332967|FBtr0100618|FBtr0085918 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 2L - 21664178 21664371 3'utr CG2225 FlyBase G12241.1 GAAGTTGAGTGGTTGGAAAGGAAAATTGCAATATGTAAACGTTTACTAGTCATTAAATATAAAAAATGAACCATAAAAAATGTATAAGAAAGATAACATATTTTTTATTAACACTCAGTGGATGCCAAAAACATAAATATTGGAATCATTTTATCAGCGGGAGCTGTGGCACTCAAAAACAAGATAAAATTATT 108 21664328 0.983677919 21 99 767 0.9375 1.77815125 0.2578125 0.157407407 0.2890625 108 7 1 120 2L:21664178-21664371 7 CG2225 FBtr0100618|FBtr0085918|FBtr0085914|FBtr0332967|FBtr0304885|FBtr0085915|FBtr0085917 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 21664296 21664373 3'utr CG2225 FlyBase G9377.1 ATGAAGTTGAGTGGTTGGAAAGGAAAATTGCAATATGTAAACGTTTACTAGTCATTAAATATAAAAAATGAACCATAA 51 21664319 0.87925287 9 41 369 0.829268293 1.355387658 0.317073171 0.450980392 0.658536585 51 12 2 68 2L:21664296-21664373 7 59 348 FBgn0032957 1484.293333 32.49333333 50.1 0.039749555 1.815757078 1.177644711 2 -7 -2.5 0.2 dme-miR-304-5p 8mer-A1 TGAGATTA 2L 21664568 21664575 - 2L_21664568_21664575_- 0.589985468 0.591499184 0.590742326 0.001070348 CG2225 FBtr0085917|FBtr0304885|FBtr0085915|FBtr0085914|FBtr0332967|FBtr0100618|FBtr0085918 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 2L - 21664480 21664599 3'utr CG2225 FlyBase G12242.1 GAGTGCAACACAGGAAAATCAAGTTGAGATTATAAAAAAATTCTTAAAACTGATACGTATAGAATTTCCAAAAACTGAAACAGAATGAAGTTAAACCCTCCACATTTTAACGAATGTTTG 39 21664576 0.968466409 6 39 217 1 1.643452676 0.090909091 0.128205128 0.227272727 39 0 0 44 2L:21664480-21664599 8 CG2225 FBtr0100618|FBtr0085918|FBtr0085914|FBtr0332967|FBtr0304885|FBtr0085915|FBtr0085917 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 TGAGATTA 8mer-A1 dme-miR-304-5p 2L - 21664530 21664589 3'utr CG2225 FlyBase G9378.1 CAGGAAAATCAAGTTGAGATTATAAAAAAATTCTTAAAACTGATACGTATAGAATTTCCA 33 21664576 0.791235382 5 33 180 1 1.69019608 0.142857143 0.363636364 0.571428571 33 0 0 49 2L:21664530-21664589 8 31 349 FBgn0032957 1484.293333 32.49333333 50.1 0.02088536 0.954041855 0.618762475 1 1 1 0.2 dme-miR-14-3p 8mer-A1 AAGACTGA 2L 21665191 21665198 - 2L_21665191_21665198_- 0.64256766 0.643500886 0.643034273 0.000659872 CG2225 FBtr0085917|FBtr0304885|FBtr0085915|FBtr0085914|FBtr0332967|FBtr0100618|FBtr0085918 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 2L - 21665183 21665242 3'utr CG2225 FlyBase G12245.1 GAAGACAATTGGAAAATTCAAATGCACAAAAGCCGTGAATCGTAAAGACTGACAATGAAA 21 21665200 0.940429867 3 20 79 0.958333333 1.361727836 0.375 0.142857143 0.25 21 1 0 23 2L:21665183-21665242 8 CG2225 FBtr0100618|FBtr0085918|FBtr0085914|FBtr0332967|FBtr0304885|FBtr0085915|FBtr0085917 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 AAGACTGA 8mer-A1 dme-miR-14-3p 2L - 21665179 21665223 3'utr CG2225 FlyBase G9381.1 AAATGCACAAAAGCCGTGAATCGTAAAGACTGACAATGAAAAAAA 12 21665200 0.943823986 4 11 40 0.85 1.230448921 0.35 0.333333333 0.6 12 3 0 17 2L:21665179-21665223 8 14.5 350 FBgn0032957 1484.293333 32.49333333 50.1 0.009768959 0.446245384 0.289421158 2 2 2 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC 2L 21665290 21665296 - 2L_21665290_21665296_- 0.399065346 0.645056688 0.522061017 0.173942187 CG2225 FBtr0085917|FBtr0304885|FBtr0085915|FBtr0085914|FBtr0332967|FBtr0100618|FBtr0085918 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 2L - 21665274 21665347 3'utr CG2225 FlyBase G12246.1 ATCTTTGCACTCACCTAGTCACTCACCTGCTCATTCGATCAGCAAAGCGCTTGTGTTCGTTCGCCTTGAAAAAA 34 21665297 0.894278006 8 32 241 0.951219512 1.290034611 0.146341463 0.176470588 0.317073171 34 1 1 39 2L:21665274-21665347 7 CG2225 FBtr0100618|FBtr0085918|FBtr0085914|FBtr0332967|FBtr0304885|FBtr0085915|FBtr0085917 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 TGTGTTC 7mer-m8 dme-miR-317-3p 2L - 21665270 21665381 3'utr CG2225 FlyBase G9382.1 CATTAACTTCTATCGGGTCGAAACCTGCCAGTTCATCTTTGCACTCACCTAGTCACTCACCTGCTCATTCGATCAGCAAAGCGCTTGTGTTCGTTCGCCTTGAAAAAATACA 23 21665297 0.983318551 10 23 167 1 1.51851394 0.121212121 0.260869565 0.484848485 23 0 0 33 2L:21665270-21665381 7 22 351 FBgn0032957 1484.293333 32.49333333 50.1 0.014821868 0.677061961 0.439121756 1 1 1 0.2 dme-miR-79-3p 6mer3-8 TAGCTT 2L 21728586 21728591 + 2L_21728586_21728591_+ 0.999968306 0.999673791 0.999821049 0.000208243 CG31619 FBtr0085901|FBtr0339131|FBtr0110959|FBtr0339132|FBtr0307497|FBtr0301000 21728172|21728122|21728172|21728172|21728172|21728172 21729051|21729051|21729051|21729051|21729051|21729051 2L + 21728554 21728605 3'utr CG31619 FlyBase G5974.1 TGACATCCATTGTCGGTTCATAGCACTGAAATTAGCTTCGATTACCACTTAG 29 21728574 0.71678821 5 28 215 0.970588235 1.217483944 0.147058824 0.137931034 0.264705882 29 0 1 33 2L:21728554-21728605 6 CG31619 FBtr0339132|FBtr0110959|FBtr0339131|FBtr0085901|FBtr0301000|FBtr0307497 21728172|21728172|21728122|21728172|21728172|21728172 21729051|21729051|21729051|21729051|21729051|21729051 TAGCTT 6mer3-8 dme-miR-79-3p 2L + 21728562 21728601 3'utr CG31619 FlyBase G4638.1 ATTGTCGGTTCATAGCACTGAAATTAGCTTCGATTACCAC 13 21728586 0.72101481 6 12 83 0.944444444 1.230448921 0.055555556 0.307692308 0.5 13 1 0 17 2L:21728562-21728601 6 16.5 352 FBgn0051619 2354.866667 61.1 93.72666667 0.007006766 0.2700491 0.176043815 12 0 6 0.2 dme-miR-305-5p 7mer-A1 GTACAAA 2L 21729007 21729013 + 2L_21729007_21729013_+ 0.542651079 0.575044744 0.558847912 0.022905734 CG31619 FBtr0085901|FBtr0339131|FBtr0110959|FBtr0339132|FBtr0307497|FBtr0301000 21728172|21728122|21728172|21728172|21728172|21728172 21729051|21729051|21729051|21729051|21729051|21729051 2L + 21728991 21729019 3'utr CG31619 FlyBase G5977.1 AAATTTGAGATGCATTGTACAAAAATTGG 12 21729005 0.712881828 2 11 64 1 1.113943352 0.307692308 0.083333333 0.153846154 12 0 0 13 2L:21728991-21729019 7 CG31619 FBtr0339132|FBtr0110959|FBtr0339131|FBtr0085901|FBtr0301000|FBtr0307497 21728172|21728172|21728122|21728172|21728172|21728172 21729051|21729051|21729051|21729051|21729051|21729051 GTACAAA 7mer-A1 dme-miR-305-5p 2L + 21728989 21729022 3'utr CG31619 FlyBase G4640.1 ACAAATTTGAGATGCATTGTACAAAAATTGGAAC 7 21729005 0.971409473 3 5 36 0.8 0.903089987 0.2 0.428571429 0.6 7 2 0 8 2L:21728989-21729022 7 8.5 353 FBgn0051619 2354.866667 61.1 93.72666667 0.003609546 0.139116203 0.090689238 2 2 2 0.2 dme-miR-34-5p 6mer3-8 CACTGC 2L 21740337 21740342 - 2L_21740337_21740342_- 0.856983902 0.957046602 0.907015252 0.070755014 step FBtr0332471 21740039 21741582 2L - 21740316 21740384 3'utr step FlyBase G12275.1 AATTGCAATATTATAAATACTTTAGTTTGATTTGTACATATACACTGCTGTGCACTATCCATTTCGTAT 8 21740338 0.979079289 6 8 66 1 1.113943352 0.153846154 0.5 0.692307692 8 0 0 13 2L:21740316-21740384 6 step FBtr0332471 21740039 21741582 CACTGC 6mer3-8 dme-miR-34-5p 2L - 21740322 21740363 3'utr step FlyBase G9402.1 TTAGTTTGATTTGTACATATACACTGCTGTGCACTATCCATT 7 21740338 0.741299185 5 7 56 1 1.041392685 0.090909091 0.428571429 0.636363636 7 0 0 11 2L:21740322-21740363 6 5.5 354 FBgn0086779 2401.73 84.77 129.5966667 0.002290016 0.064881444 0.042439363 -4 -4 -4 0.2 dme-miR-14-3p 7mer-A1 AGACTGA 2L 21740514 21740520 - 2L_21740514_21740520_- 0.779971047 0.782731608 0.781351328 0.001952039 step FBtr0332471 21740039 21741582 2L - 21740505 21740702 3'utr step FlyBase G12276.2 AAGAATGTATAAATTGCCCGTTGATGTGTAAGCAAAAAACTATAAGTCAAAAAATCATCAAACAAGAACTCTGTTGCCAGCACTGATTTTATAGTAGCCTAAAGATGCTATTAGAAAATAGTTATAGTAAATTGTGTGTCGTGGCGCTGTGATATCATTGATAGGAAAGAGCTTCTGTGTTGAGACTGAAAAAACATT 859 21740523 0.81204467 35 833 5454 0.968335036 2.374748346 0.233912155 0.124563446 0.231869254 859 28 3 948 2L:21740505-21740702 7 step FBtr0332471 21740039 21741582 AGACTGA 7mer-A1 dme-miR-14-3p 2L - 21740505 21740649 3'utr step FlyBase G9404.1 ATCATCAAACAAGAACTCTGTTGCCAGCACTGATTTTATAGTAGCCTAAAGATGCTATTAGAAAATAGTTATAGTAAATTGTGTGTCGTGGCGCTGTGATATCATTGATAGGAAAGAGCTTCTGTGTTGAGACTGAAAAAACATT 500 21740523 0.732976311 24 482 3131 0.966942149 2.147367108 0.252066116 0.34 0.545454545 500 20 4 702 2L:21740505-21740649 7 610 355 FBgn0086779 2401.73 84.77 129.5966667 0.253983587 7.195941961 4.706911186 3 3 3 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2L 21836980 21836985 + 2L_21836980_21836985_+ 0.720050031 0.72258657 0.7213183 0.001793647 tsh FBtr0085906|FBtr0085906|FBtr0085906 21836181|21836181|21836181 21837011|21837011|21837011 2L + 21836939 21837002 3'utr tsh FlyBase G6008.1 CATGCCAAGGCGAAAAGATATAAAATTGGATAAGAAAACATTGTGATCAAATACAAGATAAAAG 249 21836979 0.954628108 5 238 1092 0.96039604 1.50965048 0.00660066 0.176706827 0.323432343 249 4 8 291 2L:21836939-21837002 6 tsh FBtr0085906|FBtr0085906|FBtr0085906 21836181|21836181|21836181 21837011|21837011|21837011 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 21836938 21837002 3'utr tsh FlyBase G4666.1 ACATGCCAAGGCGAAAAGATATAAAATTGGATAAGAAAACATTGTGATCAAATACAAGATAAAAG 224 21836979 0.955795549 5 213 992 0.952095808 1.461034435 0.005988024 0.361607143 0.571856287 224 6 10 318 2L:21836938-21837002 6 234 356 FBgn0003866 1100.013333 28.07333333 43.04 0.212724694 8.335312277 5.436802974 1 1 1 0.2 dme-miR-190-5p 8mer-A1 ACATATCA 2L 2210047 2210054 - 2L_2210047_2210054_- 0.567149722 0.609657618 0.58840367 0.030057624 CG15385 FBtr0077845|FBtr0331649 2209572|2209944 2210248|2210248 2L - 2210020 2210070 3'utr CG15385 FlyBase G6989.1 ACAAATCGAAAACGATACATATCAATGGAGCACTTGTTAGACTATAAGAAC 25 2210055 0.948275306 5 20 120 0.8125 1.414973348 0.15625 0.24 0.40625 25 6 0 26 2L:2210020-2210070 8 CG15385 FBtr0331649|FBtr0077845 2209944|2209572 2210248|2210248 ACATATCA 8mer-A1 dme-miR-190-5p 2L - 2210037 2210069 3'utr CG15385 FlyBase G5475.1 CAAATCGAAAACGATACATATCAATGGAGCACT 8 2210055 0.857112441 2 8 30 1 1.146128036 0.214285714 0.625 0.785714286 8 0 0 14 2L:2210037-2210069 8 15.5 357 FBgn0031397 4.333333333 0.213333333 0.323333333 3.576923077 72.65625 47.93814433 1 1 1 0.2 dme-miR-1008-3p 6mer2-7 GCTGTG 2L 22125633 22125638 + 2L_22125633_22125638_+ 0.851530779 0.651895561 0.75171317 0.141163404 CG3651 FBtr0331657 22124938 22126614 2L + 22125606 22125664 3'utr CG3651 FlyBase G6026.1 AGTGCTTAAACTTTTCTCATAAGGCTGGCTGTGTTCTGCACGTCGTTCAAGGGCCGTGA 46 22125629 0.898311189 6 44 432 0.964285714 1.431363764 0.375 0.152173913 0.303571429 46 1 1 54 2L:22125606-22125664 6 CG3651 FBtr0331657 22124938 22126614 GCTGTG 6mer2-7 dme-miR-1008-3p 2L + 22125589 22125652 3'utr CG3651 FlyBase G4689.1 TTAACGACTGCAATCCAAGTGCTTAAACTTTTCTCATAAGGCTGGCTGTGTTCTGCACGTCGTT 24 22125631 0.988125073 8 23 207 0.90625 0.860338007 0.40625 0.208333333 0.40625 24 0 3 29 2L:22125589-22125652 6 33.5 358 FBgn0032974 1358.31 57.56666667 88.28333333 0.024663 0.58193399 0.379460072 4 2 3 0.2 dme-miR-1012-3p 7mer-A1 TGACTAA 2L 22128505 22128511 - 2L_22128505_22128511_- 0.477755279 0.823346596 0.650550937 0.244369952 CycK FBtr0085941|FBtr0085942|FBtr0344022 22128262|22128262|22124283 22128520|22128520|22128520 2L - 22128493 22128653 stop_codon CycK FlyBase G12315.1 GGGAGTCCAGCAGACAGTGGTCGGACACTATAGCGGGAGCGCTGCACCACCACCACCAATGCCGCCTAGCTTGCCTCCAGGAGCCAGTGGATACTACAACGCCGGTGGGCGTCCATCGCAGCAGCGCTACTAGTAGATGCAATGACTAATAAACAAGTAAA 26 22128516 0.94457109 11 25 102 1 1.505149978 0.375 0.115384615 0.28125 26 0 0 32 2L:22128493-22128653 7 CycK FBtr0085941|FBtr0085942|FBtr0344022 22128262|22128262|22124283 22128520|22128520|22128520 TGACTAA 7mer-A1 dme-miR-1012-3p 2L - 22128489 22128538 stop_codon CycK FlyBase G9437.1 TCGCAGCAGCGCTACTAGTAGATGCAATGACTAATAAACAAGTAAAAAAA 14 22128516 0.916662662 4 14 63 1 1.230448921 0.235294118 0.214285714 0.352941176 14 0 0 17 2L:22128489-22128538 7 15 359 FBgn0025674 1467.203333 91.78 140.27 0.010223532 0.163434299 0.106936622 5 5 5 0.2 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 2L 22158795 22158800 + 2L_22158795_22158800_+ 0.928019313 0.991269847 0.95964458 0.044724857 CG42748 FBtr0333745|FBtr0303274|FBtr0303272|FBtr0333742|FBtr0303273|FBtr0303271 22157031|22158743|22158743|22158743|22156833|22158743 22159611|22161348|22159611|22159611|22159611|22159611 2L + 22158754 22158811 5'utr CG42748 FlyBase G6049.1 AGAGTAGAAATACTGGTAACCGGCAGTTTATGCTTTTTGTTTGGTGCACGGCATTTTT 8 22158795 0.991179188 3 6 69 0.888888889 0.903089987 0.111111111 0.125 0.222222222 8 1 0 8 2L:22158754-22158811 6 CG42748 FBtr0303274|FBtr0333745|FBtr0303271|FBtr0303273|FBtr0333742|FBtr0303272 22158743|22157031|22158743|22156833|22158743|22158743 22161348|22159611|22159611|22159611|22159611|22159611 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 2L + 22158783 22158828 5'utr CG42748 FlyBase G4706.1 ATGCTTTTTGTTTGGTGCACGGCATTTTTGTAGCCTATCTGCAAAC 7 22158811 0.970251608 5 7 64 1 1.176091259 0.2 0.571428571 0.8 7 0 0 15 2L:22158783-22158828 6 5 360 FBgn0261802 1164 24.91333333 38.18666667 0.004295533 0.200695745 0.130935754 0 -16 -8 0.2 dme-miR-184-5p 6mer2-7 GATAAG 2L 22166277 22166282 - 2L_22166277_22166282_- 0.983542588 0.966746674 0.975144631 0.011876495 Clamp FBtr0100407|FBtr0085964 22165718|22165964 22166551|22166551 2L - 22166226 22166411 3'utr Clamp FlyBase G12338.1 ATATATCACCACAATGATATTAAAGAATAGAAAACGATGTTCCATCGTTAACACTTCAGCTGCATATGTCCTTTCTCCACTTTCATGTGGGATCTTCAAAAATGGGCGAAACCCAAAAACGCTTTTTACGATAAGCATACAAATGAACCTAATTTATTTGATAGCTTGTATAATATACTTAAACAT 207 22166286 0.931790669 28 198 1369 0.948207171 1.899455702 0.131474104 0.178743961 0.322709163 207 11 2 238 2L:22166226-22166411 6 Clamp FBtr0085964|FBtr0100407 22165964|22165718 22166551|22166551 GATAAG 6mer2-7 dme-miR-184-5p 2L - 22166244 22166370 3'utr Clamp FlyBase G9452.2 CCATCGTTAACACTTCAGCTGCATATGTCCTTTCTCCACTTTCATGTGGGATCTTCAAAAATGGGCGAAACCCAAAAACGCTTTTTACGATAAGCATACAAATGAACCTAATTTATTTGATAGCTTG 123 22166286 0.915477747 22 115 751 0.968421053 1.963787827 0.121052632 0.422764228 0.626315789 123 5 1 184 2L:22166244-22166370 6 48 361 FBgn0032979 2178.656667 96.29333333 147.5566667 0.022031925 0.498476876 0.325298755 4 4 4 0.2 dme-miR-252-5p 8mer-m1 GTACTTAG 2L 2220526 2220533 + 2L_2220526_2220533_+ 0.635901462 0.636199164 0.636050313 0.000210506 mio FBtr0077835 2220409 2220625 2L + 2220463 2220553 3'utr mio FlyBase G1198.1 ATGCATTAAGTTGTTGATTTGTTCCAAACGCGTGCGCCTTAAACAAACTCAGAAGTGTTCATTGTACTTAGACAAGGGATGTGCCCGTAGC 29 2220524 0.757774811 7 26 191 0.948717949 1.267171728 0.153846154 0.172413793 0.384615385 29 1 1 37 2L:2220463-2220553 8 mio FBtr0077835 2220409 2220625 GTACTTAG 8mer-m1 dme-miR-252-5p 2L + 2220478 2220550 3'utr mio FlyBase G938.1 GATTTGTTCCAAACGCGTGCGCCTTAAACAAACTCAGAAGTGTTCATTGTACTTAGACAAGGGATGTGCCCGT 16 2220525 0.979047126 6 15 100 0.956521739 1.342422681 0.347826087 0.3125 0.52173913 16 1 0 22 2L:2220478-2220550 8 18.5 362 FBgn0031399 136 5.556666667 8.516666667 0.136029412 3.329334133 2.17221135 2 1 1.5 0.2 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 2230248 2230254 + 2L_2230248_2230254_+ 0.779501393 0.778318881 0.778910137 0.000836154 sau FBtr0100673|FBtr0077840 2230125|2230125 2231099|2231088 2L + 2230223 2230279 3'utr sau FlyBase G1218.2 TTGCTGCTTTTGTTTTAGAAACTTTGCTGTGAGTGGAACCGAATCGGGCGATAGGAT 393 2230246 0.736067226 8 377 2570 0.972457627 1.883661435 0.527542373 0.152671756 0.294491525 393 8 5 459 2L:2230223-2230279 7 sau FBtr0100674|FBtr0077840|FBtr0100673 2230125|2230125|2230125 2230413|2231088|2231099 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L + 2230188 2230299 3'utr sau FlyBase G953.1 AACACAGAAATACAGACCCACATCTGGAATACATTTTGCTGCTTTTGTTTTAGAAACTTTGCTGTGAGTGGAACCGAATCGGGCGATAGGATTTTCTTAAATGGCAACCACC 288 2230246 0.974789341 16 282 1886 0.967667436 1.844062773 0.51039261 0.361111111 0.575057737 288 9 5 419 2L:2230188-2230299 7 328 363 FBgn0267378 3863.503333 238.82 367.2833333 0.084897041 1.373419312 0.893043518 2 2 2 0.2 dme-miR-184-5p 6mer3-8 TGATAA 2L 2230630 2230635 + 2L_2230630_2230635_+ 0.999640401 0.994738411 0.997189406 0.003466237 sau FBtr0100673|FBtr0077840 2230125|2230125 2231099|2231088 2L + 2230620 2230661 3'utr sau FlyBase G1219.1 AAGAAAACTTTGATAAAGTCTGGGCAAGCTGCGTGCGATTGT 8 2230633 0.949137054 3 8 44 1 0.903089987 0.125 0 0 8 0 0 8 2L:2230620-2230661 6 sau FBtr0077840|FBtr0100673 2230125|2230125 2231088|2231099 TGATAA 6mer3-8 dme-miR-184-5p 2L + 2230621 2230649 3'utr sau FlyBase G955.1 AGAAAACTTTGATAAAGTCTGGGCAAGCT 5 2230632 0.724736941 2 3 25 0.666666667 0.77815125 0.333333333 0.4 0.666666667 5 3 0 6 2L:2230621-2230649 6 5.5 364 FBgn0267378 3863.503333 238.82 367.2833333 0.001423578 0.023029897 0.014974815 -3 -2 -2.5 0.2 dme-miR-1003-3p 7mer-A1 TGTGAGA 2L 2231425 2231431 - 2L_2231425_2231431_- 0.823228902 0.806349859 0.814789381 0.011935255 Sec24CD FBtr0329964 2231104 2232047 2L - 2231394 2231434 3'utr Sec24CD FlyBase G7001.1 TCGTGTGAGAATTACTCGACTTATATGGTATATTGCCCCTT 5 2231411 0.976544323 3 4 42 1 0.84509804 0.142857143 0.2 0.428571429 5 0 0 7 2L:2231394-2231434 7 Sec24CD FBtr0329964 2231104 2232047 TGTGAGA 7mer-A1 dme-miR-1003-3p 2L - 2231393 2231429 3'utr Sec24CD FlyBase G5488.1 TGAGAATTACTCGACTTATATGGTATATTGCCCCTTC 5 2231412 0.975355028 4 5 38 1 1 0.2 0.6 0.8 5 0 0 10 2L:2231393-2231429 5 3 365 FBgn0262126 1107.336667 30.21333333 46.15333333 0.002709203 0.09929391 0.065000722 -20 -19 -19.5 0.2 dme-miR-263a-5p 6mer3-8 GTGCCA 2L 22368702 22368707 + 2L_22368702_22368707_+ 0.666494093 0.81218456 0.739339327 0.103018741 CG17018 FBtr0085956|FBtr0306235|FBtr0306236|FBtr0085957|FBtr0085958 22368442|22368442|22368442|22368442|22368442 22368776|22368796|22368776|22368776|22368776 2L + 22368628 22368757 3'utr CG17018 FlyBase G6130.1 ATATAAATGTTTTATAATGTCGAAGTATTGATTGTAAAGAAAATCAGGGATAGCAACTGGATCGGCCGTACTCAGTGCCAAAAGTTCTTACAAATCCACAAAATGTGTCGAATATATCTCTTTAAGGTCC 47 22368703 0.998130145 12 44 241 0.962962963 1.716003344 0.166666667 0.14893617 0.259259259 47 2 0 52 2L:22368628-22368757 6 CG17018 FBtr0085956|FBtr0085958|FBtr0085957|FBtr0306236|FBtr0306235 22368442|22368442|22368442|22368442|22368442 22368776|22368776|22368776|22368776|22368796 GTGCCA 6mer3-8 dme-miR-263a-5p 2L + 22368639 22368716 3'utr CG17018 FlyBase G4776.1 TTATAATGTCGAAGTATTGATTGTAAAGAAAATCAGGGATAGCAACTGGATCGGCCGTACTCAGTGCCAAAAGTTCTT 31 22368703 0.938385762 5 30 132 1 1.643452676 0.159090909 0.35483871 0.545454545 31 0 0 44 2L:22368639-22368716 6 26.5 366 FBgn0039972 1088.566667 27.93333333 43.30333333 0.024343939 0.948687351 0.611962128 -1 -1 -1 0.2 dme-bantam-3p 7mer-m8 TGATCTC 2L 22533675 22533681 - 2L_22533675_22533681_- 0.636953334 0.574630662 0.605791998 0.044068733 RpL5 FBtr0344793 22532277 22534868 2L - 22533592 22533705 3'utr RpL5 FlyBase G12384.1 ATCTAAACCTCTAATCGTGCAAACTGATCTCTTTCTGTACTATAAAGTTTAATTTTAATTTTGCGTAGCTAGAGATAGTTTTCGTTGAGCTGATGATCTCCTTTCTGTGCTAGA 43 22533673 0.817529416 13 41 376 0.958333333 1.662757832 0.375 0.11627907 0.208333333 43 2 0 46 2L:22533592-22533705 7 RpL5 FBtr0344793 22532277 22534868 TGATCTC 7mer-m8 dme-bantam-3p 2L - 22533591 22533693 3'utr RpL5 FlyBase G9489.1 AATCGTGCAAACTGATCTCTTTCTGTACTATAAAGTTTAATTTTAATTTTGCGTAGCTAGAGATAGTTTTCGTTGAGCTGATGATCTCCTTTCTGTGCTAGAT 34 22533674 0.988880417 14 32 301 0.941176471 1.681241237 0.352941176 0.294117647 0.529411765 34 3 0 48 2L:22533591-22533693 7 23 367 FBgn0064225 23918.45333 2812.8 4275.716667 0.000961601 0.008176906 0.005379215 -8 -7 -7.5 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 22534570 22534577 - 2L_22534570_22534577_- 0.441965438 0.445975231 0.443970334 0.002835357 RpL5 FBtr0344793|FBtr0332633 22532277|22533915 22534868|22534868 2L - 22534553 22534596 3'utr RpL5 FlyBase G12386.1 TGGTAAGATGGGAACTTGTGTACTTAATTCGGTTTCGGCCGCAG 33 22534578 0.740691695 6 31 310 0.972972973 1.556302501 0.432432432 0.121212121 0.216216216 33 1 0 36 2L:22534553-22534596 8 RpL5 FBtr0344793|FBtr0332633 22532277|22533915 22534868|22534868 GTACTTAA 8mer-A1 dme-miR-252-5p 2L - 22534525 22534596 3'utr RpL5 FlyBase G9490.1 TGGTAAGATGGGAACTTGTGTACTTAATTCGGTTTCGGCCGCAGTGGAACACTATTTCATCAATTCACTGCT 22 22534578 0.988479049 5 22 205 1 1.544068044 0.285714286 0.318181818 0.571428571 22 0 0 35 2L:22534525-22534596 8 26 368 FBgn0064225 23918.45333 2812.8 4275.716667 0.001087027 0.009243458 0.006080852 1 1 1 0.2 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2L 22540756 22540761 + 2L_22540756_22540761_+ 0.78954924 0.861451383 0.825500311 0.050842533 CG17490 FBtr0332629|FBtr0111259 22540487|22540487 22541293|22540900 2L + 22540727 22540762 5'utr CG17490 FlyBase G6140.1 CATCCCATCAGAACTATGCTATGTGATTTTTGAAGT 11 22540755 0.590841456 6 10 103 0.923076923 1.079181246 0.384615385 0.181818182 0.307692308 11 1 0 12 2L:22540727-22540762 6 CG17490 FBtr0111259|FBtr0332629 22540487|22540487 22540900|22541293 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2L + 22540732 22540809 5'utr CG17490 FlyBase G4785.1 CATCAGAACTATGCTATGTGATTTTTGAAGTAATAGCGCAAACATTGTTGTTGTCTGGACTTTAGATGATAAATCAAT 13 22540754 0.778974794 6 13 117 1 1.361727836 0.130434783 0.615384615 0.782608696 13 0 0 23 2L:22540732-22540809 6 9.5 369 FBgn0040009 384.5033333 18.73666667 28.78 0.024707198 0.507027219 0.330090341 1 2 1.5 0.2 dme-miR-1003-3p 8mer-A1 ATGTGAGA 2L 22992406 22992413 + 2L_22992406_22992413_+ 0.633252827 0.619771274 0.62651205 0.00953286 cta FBtr0334157 22991942 22992951 2L + 22992380 22992456 3'utr cta FlyBase G6224.1 CGTTTTGAAAAGCCATTAACCAATTTATGTGAGATTTTAAAAGCAGCTGAAATATTTTTAAATGGTCGTTAAAAGTA 48 22992404 0.827311584 10 43 400 0.870967742 1.73239376 0.064516129 0.229166667 0.403225806 48 8 0 54 2L:22992380-22992456 8 cta FBtr0334157 22991942 22992951 ATGTGAGA 8mer-A1 dme-miR-1003-3p 2L + 22992365 22992456 3'utr cta FlyBase G4851.1 TTTTGCGTGCATCTTCGTTTTGAAAAGCCATTAACCAATTTATGTGAGATTTTAAAAGCAGCTGAAATATTTTTAAATGGTCGTTAAAAGTA 41 22992404 0.988034305 15 38 348 0.901639344 1.740362689 0.098360656 0.390243902 0.590163934 41 6 0 55 2L:22992365-22992456 8 37 370 FBgn0000384 1592.86 81.62333333 124.9 0.023228658 0.453301752 0.29623699 2 2 2 0.2 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 22992669 22992674 + 2L_22992669_22992674_+ 0.999134229 0.98523567 0.992184949 0.009827724 cta FBtr0334157 22991942 22992951 2L + 22992652 22992719 3'utr cta FlyBase G6227.1 CGACTTCTAATGGAATGATGTGACTGTATACCACACTTTAAAACGGATTTAAAATAAATTAAAAAATT 18 22992670 0.970685795 8 18 116 1 1.342422681 0.045454545 0.222222222 0.363636364 18 0 0 22 2L:22992652-22992719 6 cta FBtr0334157 22991942 22992951 ATGTGA 6mer3-8 dme-miR-1003-3p 2L + 22992649 22992684 3'utr cta FlyBase G4853.1 TATCGACTTCTAATGGAATGATGTGACTGTATACCA 7 22992670 0.967233462 3 7 43 1 1.176091259 0 0.428571429 0.733333333 7 0 0 15 2L:22992649-22992684 6 11 371 FBgn0000384 1592.86 81.62333333 124.9 0.006905817 0.134765386 0.088070456 -1 -1 -1 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2L 23161222 23161228 - 2L_23161222_23161228_- 0.671779248 0.564800946 0.618290097 0.075645081 CG12567 FBtr0300704|FBtr0113705|FBtr0300703|FBtr0300702|FBtr0344847|FBtr0113704 23161120|23161120|23161120|23161120|23161120|23161120 23161957|23162856|23162903|23161957|23161957|23161957 2L - 23161167 23161246 3'utr CG12567 FlyBase G12434.1 CTTTTAATATATGTAGTAACCAAAGTGCTCAAAATTAAGAGATACATTATAGGTAGGATAATGTTACTTATGTACATTTT 14 23161221 0.985153247 7 14 110 1 1.176091259 0 0.071428571 0.133333333 14 0 0 15 2L:23161167-23161246 7 CG12567 FBtr0300702|FBtr0300703|FBtr0113705|FBtr0300704|FBtr0113704|FBtr0344847 23161120|23161120|23161120|23161120|23161120|23161120 23161957|23162903|23162856|23161957|23161957|23161957 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 23161206 23161238 3'utr CG12567 FlyBase G9526.1 ATATGTAGTAACCAAAGTGCTCAAAATTAAGAG 5 23161220 0.744184911 4 5 19 1 0.698970004 0 0 0 5 0 0 5 2L:23161206-23161238 7 7 372 FBgn0039958 1066.65 65.05666667 99.82333333 0.006562603 0.107598504 0.070123886 -7 -8 -7.5 0.2 dme-miR-1008-3p 8mer-A1 AGCTGTGA 2L 23161633 23161640 - 2L_23161633_23161640_- 0.628891986 0.521253491 0.575072738 0.076111913 CG12567 FBtr0300704|FBtr0113705|FBtr0300703|FBtr0300702|FBtr0344847|FBtr0113704 23161120|23161120|23161120|23161120|23161120|23161120 23161957|23162856|23162903|23161957|23161957|23161957 2L - 23161532 23161677 3'utr CG12567 FlyBase G12436.2 AATTATCAAATATCACTTCATTGTGTAGTCTACTAACAGCTGTGAAGAGTTTGTAATGCACTTAGAATTTTAAAAGTAGTGTTGAGCTGGTTTGTATTTGAATAATGAACAAAATAATGACAAATTCTAAAATTCTGCTAAAAAAT 70 23161646 0.92462623 24 63 495 0.905882353 1.284430734 0.294117647 0.185714286 0.329411765 70 5 3 77 2L:23161532-23161677 8 CG12567 FBtr0300702|FBtr0300703|FBtr0113705|FBtr0300704|FBtr0113704|FBtr0344847 23161120|23161120|23161120|23161120|23161120|23161120 23161957|23162903|23162856|23161957|23161957|23161957 AGCTGTGA 8mer-A1 dme-miR-1008-3p 2L - 23161619 23161723 3'utr CG12567 FlyBase G9529.3 TTTTATTTCACAATATCGGTCAGCATTAAGAAGTAAAATTATTACAAATTATCAAATATCACTTCATTGTGTAGTCTACTAACAGCTGTGAAGAGTTTGTAATGC 70 23161646 0.865760245 14 65 399 0.948717949 1.568201724 0.162393162 0.471428571 0.683760684 70 4 2 111 2L:23161619-23161723 8 41.5 373 FBgn0039958 1066.65 65.05666667 99.82333333 0.038906858 0.637905416 0.415734464 6 6 6 0.2 dme-miR-31a-5p 8mer-A1 TCTTGCCA 2L 23162033 23162040 - 2L_23162033_23162040_- 0.618107901 0.604496861 0.611302381 0.00962443 CG12567 FBtr0113705|FBtr0300703 23161120|23161120 23162856|23162903 2L - 23161998 23162083 3'utr CG12567 FlyBase G12439.1 ACGTACAAGACACGCTTTGAGCAATCCATAAAACAACCTCAATTCTTGCCAGGTGATTCCAAAAACTGTAACTGTGCAATATTTCA 48 23162041 0.79079679 7 46 260 0.981481481 1.423245874 0.018518519 0.083333333 0.185185185 48 0 1 53 2L:23161998-23162083 8 CG12567 FBtr0300703|FBtr0113705 23161120|23161120 23162903|23162856 TCTTGCCA 8mer-A1 dme-miR-31a-5p 2L - 23162000 23162082 3'utr CG12567 FlyBase G9531.1 CGTACAAGACACGCTTTGAGCAATCCATAAAACAACCTCAATTCTTGCCAGGTGATTCCAAAAACTGTAACTGTGCAATATTT 40 23162041 0.968761512 5 39 216 1 1.799340549 0.031746032 0.375 0.603174603 40 0 0 63 2L:23162000-23162082 8 38 374 FBgn0039958 1066.65 65.05666667 99.82333333 0.035625557 0.584106164 0.380672521 1 1 1 0.2 dme-miR-305-3p 6mer2-7 TGTGCC 2L 23162361 23162366 - 2L_23162361_23162366_- 0.901944759 0.892039325 0.896992042 0.007004246 CG12567 FBtr0113705|FBtr0300703 23161120|23161120 23162856|23162903 2L - 23162315 23162434 5'utr CG12567 FlyBase G12442.1 TTTGAAAGCCGACAAGGACTTTTTCCCAATACCGAATATGTTTTCGACTTAGAGCTACCACTTGACTTTGTGCCTCAAAACGCTGACGGGGAGGTCCAGGCCTTTGAGCTGCTAACAGCC 60 23162366 0.840406626 14 59 416 0.987012987 1.880813592 0.116883117 0.233333333 0.402597403 60 1 0 76 2L:23162315-23162434 6 CG12567 FBtr0300703|FBtr0113705 23161120|23161120 23162903|23162856 TGTGCC 6mer2-7 dme-miR-305-3p 2L - 23162323 23162393 5'utr CG12567 FlyBase G9532.1 TTTCGACTTAGAGCTACCACTTGACTTTGTGCCTCAAAACGCTGACGGGGAGGTCCAGGCCTTTGAGCTGC 27 23162366 0.980996732 6 27 193 1 1.653212514 0.155555556 0.333333333 0.6 27 0 0 45 2L:23162323-23162393 6 34.5 375 FBgn0039958 1066.65 65.05666667 99.82333333 0.032344255 0.530306912 0.345610579 0 0 0 0.2 dme-miR-276a-3p 6mer3-8 AGTTCC 2L 2369659 2369664 + 2L_2369659_2369664_+ 0.966522458 0.884990335 0.925756396 0.057651972 Axud1 FBtr0077762|FBtr0330666|FBtr0330665|FBtr0077763 2368980|2368980|2368980|2368980 2370137|2370137|2370137|2370137 2L + 2369542 2369682 3'utr Axud1 FlyBase G1229.1 AATCGGACTCAAGTCGCCTTGTATAAATCATTTTATTGTTAAATTCGAGTTAGTCTCTAAGTACATACTGTAGTTTAGTTACTTTGTTGCTTAAGTTAAGTTCACTTCGCAAAATCAAGTTCCCTTCCTACTCAACTTTAA 20 2369661 0.990769375 10 16 170 0.833333333 1 0.041666667 0.15 0.291666667 20 3 1 20 2L:2369542-2369682 6 Axud1 FBtr0077763|FBtr0330665|FBtr0330666|FBtr0077762 2368980|2368980|2368980|2368980 2370137|2370137|2370137|2370137 AGTTCC 6mer3-8 dme-miR-276a-3p 2L + 2369630 2369676 3'utr Axud1 FlyBase G962.1 GCTTAAGTTAAGTTCACTTCGCAAAATCAAGTTCCCTTCCTACTCAA 6 2369661 0.969950406 3 6 36 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 2L:2369630-2369676 6 8 376 FBgn0261647 491.4533333 14.28 22 0.01627825 0.56022409 0.363636364 -2 -2 -2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2L 2422637 2422642 + 2L_2422637_2422642_+ 0.928783502 0.814795791 0.871789646 0.080601476 CG9886 FBtr0077770|FBtr0077770|FBtr0077770|FBtr0335462|FBtr0335462|FBtr0335462 2422414|2422414|2422414|2422414|2422414|2422414 2422910|2422910|2422910|2424647|2424647|2424647 2L + 2422622 2422648 3'utr CG9886 FlyBase G1241.1 AAATTCAAATAATTTTGTGATCTTTAT 5 2422635 0.798768526 4 5 49 1 0.698970004 0 0 0 5 0 0 5 2L:2422622-2422648 6 CG9886 FBtr0077770|FBtr0077770|FBtr0077770|FBtr0335462|FBtr0335462|FBtr0335462 2422414|2422414|2422414|2422414|2422414|2422414 2422910|2422910|2422910|2424647|2424647|2424647 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 2422626 2422656 3'utr CG9886 FlyBase G971.1 TCAAATAATTTTGTGATCTTTATGCTCTGAG 5 2422636 0.685291148 3 4 49 0.857142857 0.77815125 0.857142857 0.4 0.571428571 5 1 0 6 2L:2422626-2422656 6 4.5 377 FBgn0031428 49.66666667 2.643333333 4.073333333 0.090604027 1.702395965 1.104746318 2 1 1.5 0.2 dme-miR-79-3p 7mer-m8 TAGCTTT 2L 2422688 2422694 + 2L_2422688_2422694_+ 0.559006371 0.597329234 0.578167802 0.027098312 CG9886 FBtr0077770|FBtr0335462 2422414|2422414 2422910|2424647 2L + 2422668 2422706 3'utr CG9886 FlyBase G1242.1 TGACAGCATAAAACGGCAATTAGCTTTCGTCTCCGGTTA 6 2422687 0.980892215 2 6 46 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 2L:2422668-2422706 7 CG9886 FBtr0077770|FBtr0335462 2422414|2422414 2422910|2424647 TAGCTTT 7mer-m8 dme-miR-79-3p 2L + 2422677 2422702 3'utr CG9886 FlyBase G972.1 AAAACGGCAATTAGCTTTCGTCTCCG 5 2422687 0.943960656 2 5 30 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 2L:2422677-2422702 7 5.5 378 FBgn0031428 49.66666667 2.643333333 4.073333333 0.110738255 2.080706179 1.350245499 1 1 1 0.2 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 2497415 2497422 + 2L_2497415_2497422_+ 0.624826092 0.624920781 0.624873436 6.70E-05 oaf FBtr0077777|FBtr0077780|FBtr0077778 2496696|2497161|2496696 2498846|2498846|2498454 2L + 2497304 2497462 3'utr oaf FlyBase G1249.1 TATACTACAGCAAAAAAGGAGTAAAACGAAATAAATGTAAAAAAGTGCTTCTGTATACTATGTATATATATGTATATTTAACGATGATTAGCTTTTAGCCAGCTTACGTTTTACGCTTATGCCGGATTTAAGTTTAGACCTAGATTAGGTGTCCTTATT 46 2497391 0.989282309 15 44 412 0.962962963 1.716003344 0.240740741 0.152173913 0.277777778 46 2 0 52 2L:2497304-2497462 8 oaf FBtr0077780|FBtr0077778|FBtr0077777 2497161|2496696|2496696 2498846|2498454|2498846 TACGCTTA 8mer-A1 dme-miR-965-3p 2L + 2497373 2497467 3'utr oaf FlyBase G976.1 ATGTATATTTAACGATGATTAGCTTTTAGCCAGCTTACGTTTTACGCTTATGCCGGATTTAAGTTTAGACCTAGATTAGGTGTCCTTATTTAATT 21 2497414 0.988198333 6 20 189 0.970588235 1.217483944 0.411764706 0.428571429 0.647058824 21 0 1 33 2L:2497373-2497467 8 17 379 FBgn0011818 255.6 10.51666667 16.17333333 0.066510172 1.616481775 1.051112943 24 1 12.5 0.2 dme-bantam-3p 6mer3-8 TGATCT 2L 2497552 2497557 + 2L_2497552_2497557_+ 0.605890904 0.660588219 0.633239562 0.038676832 oaf FBtr0077777|FBtr0077780|FBtr0077778 2496696|2497161|2496696 2498846|2498846|2498454 2L + 2497534 2497563 3'utr oaf FlyBase G1250.1 TCCTTTCCTACTACAGTGTGATCTTTTATC 10 2497545 0.769796121 5 10 88 1 1.176091259 0 0.3 0.533333333 10 0 0 15 2L:2497534-2497563 6 oaf FBtr0077780|FBtr0077778|FBtr0077777 2497161|2496696|2496696 2498846|2498454|2498846 TGATCT 6mer3-8 dme-bantam-3p 2L + 2497531 2497563 3'utr oaf FlyBase G977.1 TAATCCTTTCCTACTACAGTGTGATCTTTTATC 9 2497546 0.782081952 4 9 97 1 1.113943352 0 0.444444444 0.615384615 9 0 0 13 2L:2497531-2497563 6 9.5 380 FBgn0011818 255.6 10.51666667 16.17333333 0.037167449 0.903328051 0.587386645 7 6 6.5 0.2 dme-miR-932-5p 6mer3-8 GGAATT 2L 2498090 2498095 + 2L_2498090_2498095_+ 0.849944976 0.76137653 0.805660753 0.062627387 oaf FBtr0077777|FBtr0077780|FBtr0077778 2496696|2497161|2496696 2498846|2498846|2498454 2L + 2498041 2498111 3'utr oaf FlyBase G1253.1 ATTCATTGAACTAAGGAATATGTATGTATGTCAGGCGTTGGCAAAACTCGGAATTAATTGTGCTCATAATA 6 2498098 0.973158993 5 6 40 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 2L:2498041-2498111 6 oaf FBtr0077780|FBtr0077778|FBtr0077777 2497161|2496696|2496696 2498846|2498454|2498846 GGAATT 6mer3-8 dme-miR-932-5p 2L + 2498047 2498111 3'utr oaf FlyBase G980.1 TGAACTAAGGAATATGTATGTATGTCAGGCGTTGGCAAAACTCGGAATTAATTGTGCTCATAATA 10 2498098 0.984050599 4 9 69 0.923076923 0.77815125 0 0.3 0.461538462 10 0 1 12 2L:2498047-2498111 6 6 381 FBgn0011818 255.6 10.51666667 16.17333333 0.023474178 0.570522979 0.370981039 -8 -8 -8 0.2 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 2L 2739561 2739566 + 2L_2739561_2739566_+ 0.400339947 0.363729275 0.382034611 0.025887604 CG31689 FBtr0077707|FBtr0077707|FBtr0334158|FBtr0334158|FBtr0077708|FBtr0077708|FBtr0077705|FBtr0077705|FBtr0077706|FBtr0077706|FBtr0334160|FBtr0334160|FBtr0334159|FBtr0334159|FBtr0334161|FBtr0334161 2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499 2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830 2L + 2739508 2739574 3'utr CG31689 FlyBase G1276.1 GGGGGGGGGGCTTTTAGTATTCGGCTTAATTTGAATCGAATGTGATTTTATGTTACTTATGTATGTA 75 2739555 0.991187463 12 71 749 0.93877551 1.361727836 0.387755102 0.24 0.418367347 75 3 3 92 2L:2739508-2739574 6 CG31689 FBtr0077705|FBtr0077705|FBtr0077708|FBtr0077708|FBtr0334158|FBtr0334158|FBtr0077707|FBtr0077707|FBtr0334161|FBtr0334161|FBtr0334159|FBtr0334159|FBtr0334160|FBtr0334160|FBtr0077706|FBtr0077706 2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499|2739499 2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830|2739830 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 2L + 2739487 2739577 stop_codon CG31689 FlyBase G996.1 TCAAGACGAACTGATGGGGGGGGGGGGGGGGCTTTTAGTATTCGGCTTAATTTGAATCGAATGTGATTTTATGTTACTTATGTATGTATGT 51 2739555 0.988316846 12 46 487 0.890410959 0.967815317 0.315068493 0.333333333 0.534246575 51 2 6 65 2L:2739487-2739577 6 25.5 382 FBgn0031449 1015.49 47.98666667 73.49333333 0.02511103 0.53139761 0.346970247 6 6 6 0.2 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2L 2756584 2756589 + 2L_2756584_2756589_+ 0.961945015 0.892998015 0.927471515 0.048752891 Bacc FBtr0307080|FBtr0335125 2756293|2756293 2757975|2757920 2L + 2756543 2756774 5'utr-coding Bacc FlyBase G1300.2 ACTTTTTTTATAAAAAACTACAAAACAAACAAAAATTGTAATTGAAGGCATTTTCGTATAAACGCAACCTATACGGAATCCAACAAAAAGTAAACATCCCCACTATATACAAGAACAAAACAAAACCAAAATCTTTCTTTCCTTTATCTCATAAGTCCTAATTTAAACGCCCAGTTGATGCGTAAACCAAGATATACAAAGATTTCAAATGTAGCGTAAACGAAGCCCGCGA 111 2756578 0.970383919 30 99 603 0.911764706 1.61630043 0.147058824 0.216216216 0.360294118 111 10 2 124 2L:2756543-2756774 6 Bacc FBtr0307080|FBtr0335125 2756293|2756293 2757975|2757920 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2L + 2756526 2756662 5'utr Bacc FlyBase G1011.1 AATTGTATTTTATGTGTACTTTTTTTATAAAAAACTACAAAACAAACAAAAATTGTAATTGAAGGCATTTTCGTATAAACGCAACCTATACGGAATCCAACAAAAAGTAAACATCCCCACTATATACAAGAACAAAA 53 2756578 0.967969085 18 47 264 0.911392405 1.857332496 0.253164557 0.396226415 0.594936709 53 7 0 72 2L:2756526-2756662 6 34.5 383 FBgn0031453 6284.453333 781.6066667 1192.22 0.005489738 0.044139849 0.028937612 6 6 6 0.2 dme-miR-8-3p 8mer-A1 CAGTATTA 2L 2757260 2757267 + 2L_2757260_2757267_+ 0.630569868 0.636633042 0.633601455 0.004287259 Bacc FBtr0307080|FBtr0335125 2756293|2756293 2757975|2757920 2L + 2757236 2757330 5'utr Bacc FlyBase G1304.1 ATGACTAATCTTAAGTACTTATGTCAGTATTAAAGCGAGGGCTTTATTATTCTGTTGATAAGTTGTGCGAGCGAGTCGTTGATAAGCCTAATTCA 217 2757257 0.858738949 9 214 1930 0.987234043 2.365487985 0.370212766 0.069124424 0.140425532 217 3 0 232 2L:2757236-2757330 8 Bacc FBtr0307080|FBtr0335125 2756293|2756293 2757975|2757920 CAGTATTA 8mer-A1 dme-miR-8-3p 2L + 2757236 2757329 5'utr Bacc FlyBase G1014.1 ATGACTAATCTTAAGTACTTATGTCAGTATTAAAGCGAGGGCTTTATTATTCTGTTGATAAGTTGTGCGAGCGAGTCGTTGATAAGCCTAATTC 113 2757257 0.867345377 14 105 951 0.943396226 1.875061263 0.402515723 0.309734513 0.509433962 113 8 1 150 2L:2757236-2757329 8 144.5 384 FBgn0031453 6284.453333 781.6066667 1192.22 0.022993249 0.184875598 0.121202463 3 3 3 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 2L 2763587 2763593 - 2L_2763587_2763593_- 0.52122322 0.521221409 0.521222314 1.27E-06 CG3077 FBtr0335129 2763414 2764305 2L - 2763565 2763609 3'utr CG3077 FlyBase G7083.1 TTCCAGCCCAATGTCTTGTGATTGCTTTTTCAATAAATAAATATT 58 2763594 0.601201452 6 54 474 0.941176471 1.329058719 0.029411765 0.155172414 0.279411765 58 2 2 64 2L:2763565-2763609 7 CG3077 FBtr0335129 2763414 2764305 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 2763555 2763611 3'utr CG3077 FlyBase G5559.1 TCTTCCAGCCCAATGTCTTGTGATTGCTTTTTCAATAAATAAATATTATACTCAAGT 35 2763594 0.986368474 7 34 284 0.961538462 1.22184875 0.038461538 0.428571429 0.615384615 35 0 2 50 2L:2763555-2763611 7 44.5 385 FBgn0031457 325.67 20.19 30.60333333 0.136641385 2.204061417 1.454089968 1 1 1 0.2 dme-miR-283-5p 6mer3-8 TGATAT 2L 2763811 2763816 - 2L_2763811_2763816_- 0.994768657 0.980916626 0.987842641 0.009794914 CG3077 FBtr0335129 2763414 2764305 2L - 2763784 2763838 3'utr CG3077 FlyBase G7084.1 ATGTTTCATGTTACGTATTGTTTGATATCTCTTCAATCGTCTAGTTTGTAGTTTG 11 2763828 0.816704759 5 9 122 0.769230769 1 0.076923077 0.181818182 0.307692308 11 3 0 10 2L:2763784-2763838 6 CG3077 FBtr0335129 2763414 2764305 TGATAT 6mer3-8 dme-miR-283-5p 2L - 2763764 2763884 3'utr CG3077 FlyBase G5560.1 CGTAACGTACTGCTTTGGTAACTTAAAGGTTAGTCTAAGCATATTTATGTTTCATGTTACGTATTGTTTGATATCTCTTCAATCGTCTAGTTTGTAGTTTGTACCCAGTGGGAGTTGTGAT 18 2763817 0.992229097 11 14 171 0.884615385 1.361727836 0.269230769 0.333333333 0.538461538 18 3 0 23 2L:2763764-2763884 6 6.5 386 FBgn0031457 325.67 20.19 30.60333333 0.019958854 0.321941555 0.212395164 12 1 6.5 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 2811983 2811990 + 2L_2811983_2811990_+ 0.435389386 0.434474288 0.434931837 0.000647073 daw FBtr0077720|FBtr0077721|FBtr0335151 2811758|2811758|2811758 2812145|2812145|2812376 2L + 2811906 2812042 3'utr daw FlyBase G1341.1 ATTAGCGTTGTCATTTAATCGTAGTTACCTGTAGTGCCTGAGCTGCCACTAGTTGATAGTTAAAAGCTAAAGTCAATGTACTTAAGCTCTCGAAGTATGTAGGTAGTTAGCCAATGGCTTCAATTAATTTAATAGCT 1340 2811982 0.830240232 34 1281 9622 0.956386293 2.072165028 0.251713396 0.163432836 0.301557632 1340 58 12 1535 2L:2811906-2812042 8 daw FBtr0335151|FBtr0077720|FBtr0077721 2811758|2811758|2811758 2812376|2812145|2812145 GTACTTAA 8mer-A1 dme-miR-252-5p 2L + 2811900 2812040 3'utr daw FlyBase G1042.1 ATTTACATTAGCGTTGTCATTTAATCGTAGTTACCTGTAGTGCCTGAGCTGCCACTAGTTGATAGTTAAAAGCTAAAGTCAATGTACTTAAGCTCTCGAAGTATGTAGGTAGTTAGCCAATGGCTTCAATTAATTTAATAG 935 2811982 0.954507947 31 891 6677 0.953058321 1.848351197 0.280227596 0.351871658 0.568990043 935 48 18 1340 2L:2811900-2812040 8 799 387 FBgn0031461 129.3333333 5.623333333 8.523333333 6.177835052 142.0865442 93.74266719 1 1 1 0.2 dme-miR-12-5p 8mer-A1 AATACTCA 2L 281843 281850 + 2L_281843_281850_+ 0.439378955 0.639002429 0.539190692 0.14115506 smo FBtr0078129 281513 282167 2L + 281799 281872 3'utr smo FlyBase G662.1 CGATTACTGGAACAGACTGAGCGAAACTAGAACTACGAATTACGAATACTCATAGTCATTAGGCTGCAACTTTA 26 281857 0.726756547 10 24 165 0.84375 1.431363764 0.125 0.153846154 0.3125 26 5 0 27 2L:281799-281872 8 smo FBtr0078129 281513 282167 AATACTCA 8mer-A1 dme-miR-12-5p 2L + 281833 281870 3'utr smo FlyBase G532.1 ACGAATTACGAATACTCATAGTCATTAGGCTGCAACTT 13 281856 0.624053993 5 13 81 1 1.278753601 0.157894737 0.307692308 0.526315789 13 0 0 19 2L:281833-281870 8 17 388 FBgn0003444 542.8533333 16.28333333 24.88333333 0.031316009 1.044012282 0.683188212 -14 -13 -13.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 2868509 2868515 + 2L_2868509_2868515_+ 0.799152932 0.799249465 0.799201199 6.83E-05 CG2991 FBtr0077626|FBtr0077626|FBtr0077626|FBtr0077627|FBtr0077627|FBtr0077627|FBtr0077625|FBtr0077625|FBtr0077625 2867666|2867666|2867666|2867666|2867666|2867666|2867666|2867666|2867666 2868548|2868548|2868548|2868548|2868548|2868548|2868548|2868548|2868548 2L + 2868322 2868534 3'utr CG2991 FlyBase G1368.1 AAGTTTACTCCTTAAGAAACTGATTTGTATAAGCTGCGCCCATATATACATACACACGAACATATATAATATATATATATAAATTTTATTGTAGTTACTACACAAAATTTGTCAAAGCAAAGAAAAACAAAACAAAATCCACAAAAGGAAAGAATCCAACATACAATTTAAGTTACCATACAATTTTTGTGATAAAACTAACAAATAAAATAC 236 2868507 0.999997792 26 221 1812 0.940972222 1.65481804 0.038194444 0.177966102 0.326388889 236 12 5 271 2L:2868322-2868534 7 CG2991 FBtr0077627|FBtr0077627|FBtr0077627|FBtr0077625|FBtr0077625|FBtr0077625|FBtr0077626|FBtr0077626|FBtr0077626 2867666|2867666|2867666|2867666|2867666|2867666|2867666|2867666|2867666 2868548|2868548|2868548|2868548|2868548|2868548|2868548|2868548|2868548 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 2868490 2868533 3'utr CG2991 FlyBase G1072.1 TAAGTTACCATACAATTTTTGTGATAAAACTAACAAATAAAATA 112 2868507 0.651175358 8 108 917 0.95483871 1.693140461 0 0.276785714 0.477419355 112 5 2 148 2L:2868490-2868533 7 146.5 389 FBgn0031474 1557.266667 62.85666667 96.35333333 0.094075089 2.330699475 1.520445582 2 2 2 0.2 dme-miR-190-5p 6mer3-8 ACATAT 2L 2868670 2868675 - 2L_2868670_2868675_- 0.999989241 0.999999931 0.999994586 7.57E-06 CG31694 FBtr0077685 2868625 2869170 2L - 2868648 2868724 3'utr CG31694 FlyBase G7116.1 TCATAACTTGACATGGCTTTTAATACGCATAATAAGCGGCTCTATGAATACATATATTTTGTAGTAAATAAGTGTAA 14 2868702 0.900111063 7 12 126 0.75 1.079181246 0.0625 0.071428571 0.1875 14 4 0 12 2L:2868648-2868724 6 CG31694 FBtr0077685 2868625 2869170 ACATAT 6mer3-8 dme-miR-190-5p 2L - 2868651 2868702 3'utr CG31694 FlyBase G5583.1 ATACGCATAATAAGCGGCTCTATGAATACATATATTTTGTAGTAAATAAGTG 6 2868669 0.98745762 6 6 39 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2L:2868651-2868702 6 4.5 390 FBgn0051694 1042 47.93 73.36 0.004318618 0.093886918 0.06134133 27 -6 10.5 0.2 dme-miR-965-3p 7mer-m8 TACGCTT 2L 2868815 2868821 - 2L_2868815_2868821_- 0.602451308 0.580516407 0.591483858 0.015510317 CG31694 FBtr0077685 2868625 2869170 2L - 2868733 2868859 3'utr CG31694 FlyBase G7117.1 GAATTTAAATTAACACTGCGATTGTTACGACTGGCATTTACGCTTTGCGATTTGGGTTAACCTCTTTTGTTGTTGATCTTTTTAAATTACAAGCGTAGGAAAACATAGTCTGCTTTAATGCTGCGAA 128 2868837 0.747326193 32 126 1043 0.9875 2.198657087 0.2375 0.1875 0.35 128 2 0 158 2L:2868733-2868859 7 CG31694 FBtr0077685 2868625 2869170 TACGCTT 7mer-m8 dme-miR-965-3p 2L - 2868724 2868855 3'utr CG31694 FlyBase G5584.1 TTAAATTAACACTGCGATTGTTACGACTGGCATTTACGCTTTGCGATTTGGGTTAACCTCTTTTGTTGTTGATCTTTTTAAATTACAAGCGTAGGAAAACATAGTCTGCTTTAATGCTGCGAAAAAGTTATT 99 2868837 0.780898553 23 92 734 0.938650307 1.707570176 0.263803681 0.454545455 0.668711656 99 8 2 153 2L:2868724-2868855 7 40 391 FBgn0051694 1042 47.93 73.36 0.038387716 0.834550386 0.54525627 16 16 16 0.2 dme-miR-79-3p 7mer-m8 TAGCTTT 2L 2876816 2876822 + 2L_2876816_2876822_+ 0.620185767 0.619294205 0.619739986 0.000630456 CG8814 FBtr0077629 2876361 2877168 2L + 2876787 2876841 3'utr CG8814 FlyBase G1379.1 TCTTCGGTTACGGGCACGAGCTTGGTCTTTAGCTTTCTTCTATCCTAGAAAGCGC 27 2876810 0.732747655 7 27 259 1 1.505149978 0 0.148148148 0.28125 27 0 0 32 2L:2876787-2876841 7 CG8814 FBtr0077629 2876361 2877168 TAGCTTT 7mer-m8 dme-miR-79-3p 2L + 2876788 2876826 3'utr CG8814 FlyBase G1079.1 CTTCGGTTACGGGCACGAGCTTGGTCTTTAGCTTTCTTC 23 2876809 0.750623232 6 21 186 0.972222222 1.544068044 0.138888889 0.434782609 0.638888889 23 1 0 35 2L:2876788-2876826 7 23 392 FBgn0031478 361.3733333 24.66 37.60666667 0.063646091 0.932684509 0.611593689 6 7 6.5 0.2 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 2877098 2877105 - 2L_2877098_2877105_- 0.625001833 0.624921493 0.624961663 5.68E-05 Prx6005 FBtr0077684 2877089 2877187 2L - 2877090 2877115 3'utr Prx6005 FlyBase G7126.1 CAATAAAGTATACGCTTACAACCGTA 8 2877105 0.758865998 2 6 28 0.916666667 1.041392685 0 0.25 0.5 8 1 0 11 2L:2877090-2877115 8 Prx6005 FBtr0077684 2877089 2877187 TACGCTTA 8mer-A1 dme-miR-965-3p 2L - 2877090 2877116 3'utr Prx6005 FlyBase G5590.1 ACAATAAAGTATACGCTTACAACCGTA 6 2877105 0.731785716 2 6 28 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2L:2877090-2877116 8 6 393 FBgn0031479 67.29333333 9.753333333 14.81333333 0.089161878 0.615174299 0.405040504 0 0 0 0.2 dme-bantam-3p 6mer3-8 TGATCT 2L 2880714 2880719 - 2L_2880714_2880719_- 0.970534287 0.991409353 0.98097182 0.014760925 NTPase FBtr0332459|FBtr0332460|FBtr0077683|FBtr0077682|FBtr0077680 2880702|2880702|2880703|2880702|2880702 2881227|2881227|2881227|2881227|2881227 2L - 2880701 2880737 5'utr-coding NTPase FlyBase G7128.1 AATAAATCAAATGTTAACTGATCTGAATTAAAGTAAA 9 2880710 0.701303948 5 8 69 0.888888889 0.903089987 0.111111111 0 0 9 1 0 8 2L:2880701-2880737 6 NTPase FBtr0077682|FBtr0077680|FBtr0332460|FBtr0077683|FBtr0332459 2880702|2880702|2880702|2880703|2880702 2881227|2881227|2881227|2881227|2881227 TGATCT 6mer3-8 dme-bantam-3p 2L - 2880702 2880729 5'utr-coding NTPase FlyBase G5592.1 AAATGTTAACTGATCTGAATTAAAGTAA 9 2880710 0.660348524 4 8 64 1 1.113943352 0.076923077 0.333333333 0.538461538 9 0 0 13 2L:2880702-2880729 6 9 394 FBgn0024947 993.2366667 56.17666667 85.57666667 0.009061284 0.160208865 0.105168854 -9 -9 -9 0.2 dme-miR-79-3p 6mer3-8 TAGCTT 2L 297395 297400 + 2L_297395_297400_+ 0.682010241 0.769045691 0.725527966 0.061543392 Hop FBtr0078131 297048 297449 2L + 297302 297415 3'utr Hop FlyBase G679.1 ATTGATAAATGTCTGCCTAATTGATTTACGCAGACGGGTGGAGTAGGCTCCAAACGTCATGGTCCTTATTTTCTTACTACAATAAATATGCTGTAGCTTAGCTCTAAAATAAGT 35 297390 0.807157538 11 32 257 0.928571429 0.989004616 0.166666667 0.142857143 0.285714286 35 0 3 39 2L:297302-297415 6 Hop FBtr0078131 297048 297449 TAGCTT 6mer3-8 dme-miR-79-3p 2L + 297300 297432 3'utr Hop FlyBase G549.1 TCATTGATAAATGTCTGCCTAATTGATTTACGCAGACGGGTGGAGTAGGCTCCAAACGTCATGGTCCTTATTTTCTTACTACAATAAATATGCTGTAGCTTAGCTCTAAAATAAGTTTCTGTTTGTACAATAA 24 297390 0.912276558 13 22 196 0.935483871 1.462397998 0.096774194 0.208333333 0.387096774 24 2 0 29 2L:297300-297432 6 10 395 FBgn0024352 5110.506667 309.7066667 476.4533333 0.001956753 0.032288617 0.020988414 5 5 5 0.2 dme-miR-184-5p 8mer-A1 TGATAAGA 2L 2974707 2974714 + 2L_2974707_2974714_+ 0.60098872 0.575086926 0.588037823 0.018315338 gammaTub23C FBtr0077641 2974603 2974858 2L + 2974692 2974733 3'utr gammaTub23C FlyBase G1415.1 ATCCTTAAGTAGTAGTGATAAGACGATTGTTGGTATGACTCG 6 2974722 0.678962101 4 6 38 1 0.77815125 0.666666667 0 0 6 0 0 6 2L:2974692-2974733 8 gammaTub23C FBtr0077641 2974603 2974858 TGATAAGA 8mer-A1 dme-miR-184-5p 2L + 2974699 2974751 3'utr gammaTub23C FlyBase G1100.1 AGTAGTAGTGATAAGACGATTGTTGGTATGACTCGCATGTATGTAAACGCTGT 6 2974718 0.986652589 3 4 39 0.909090909 1 0.363636364 0.5 0.727272727 6 1 0 10 2L:2974699-2974751 8 5 396 FBgn0260639 328 21.35666667 32.38 0.015243902 0.234118932 0.154416306 -15 -11 -13 0.2 dme-miR-980-3p 6mer2-7 GCAGCT 2L 2974991 2974996 - 2L_2974991_2974996_- 0.999314623 0.99034223 0.994828426 0.006344445 CG9641 FBtr0077677|FBtr0077676 2974857|2974857 2975177|2975177 2L - 2974978 2975024 3'utr CG9641 FlyBase G7155.1 GACAACGGAACAAGGACAGCAGTATCGTGCAGCTTCACAAGTGAATT 6 2974997 0.937676622 3 5 21 1 0.903089987 0.625 0.333333333 0.5 6 0 0 8 2L:2974978-2975024 6 CG9641 FBtr0077677|FBtr0077676 2974857|2974857 2975177|2975177 GCAGCT 6mer2-7 dme-miR-980-3p 2L - 2974986 2975026 3'utr CG9641 FlyBase G5611.1 ATGACAACGGAACAAGGACAGCAGTATCGTGCAGCTTCACA 8 2975002 0.948118601 3 7 25 0.909090909 1 0.272727273 0.375 0.545454545 8 1 0 10 2L:2974986-2975026 6 5.5 397 FBgn0031483 465.01 30.09666667 46.35666667 0.011827703 0.18274449 0.118645287 1 6 3.5 0.2 dme-miR-999-3p 7mer-A1 GTTAACA 2L 2989543 2989549 + 2L_2989543_2989549_+ 0.7999541 0.809102334 0.804528217 0.006468754 Bem46 FBtr0077643 2989510 2990075 2L + 2989522 2989560 3'utr Bem46 FlyBase G1427.1 ATCAAGTGTTCAATTGACTGTGTTAACACTGCGAATGGT 21 2989536 0.723940947 6 21 174 1 1.397940009 0.16 0.142857143 0.28 21 0 0 25 2L:2989522-2989560 7 Bem46 FBtr0077643 2989510 2990075 GTTAACA 7mer-A1 dme-miR-999-3p 2L + 2989516 2989552 3'utr Bem46 FlyBase G1112.1 GAATACATCAAGTGTTCAATTGACTGTGTTAACACTG 15 2989536 0.947763754 6 13 124 0.875 0.84509804 0.041666667 0.4 0.625 15 1 2 21 2L:2989516-2989552 7 18 398 FBgn0025109 189.0366667 13.54 20.76666667 0.095219622 1.329394387 0.866773676 7 7 7 0.2 dme-miR-33-5p 7mer-m1 AATGCAC 2L 2998420 2998426 + 2L_2998420_2998426_+ 0.738175728 0.722539562 0.730357645 0.011056392 CG3558 FBtr0331653|FBtr0077644|FBtr0273230|FBtr0077645 2998247|2998247|2998247|2998247 2998726|2998726|2998726|2998726 2L + 2998407 2998443 3'utr CG3558 FlyBase G1447.1 AGATTTACAAGTTAATGCACACGGACTCAACTAAAAA 6 2998422 0.877258049 3 6 24 1 0.77815125 0 0 0 6 0 0 6 2L:2998407-2998443 7 CG3558 FBtr0273230|FBtr0077645|FBtr0331653|FBtr0077644 2998247|2998247|2998247|2998247 2998726|2998726|2998726|2998726 AATGCAC 7mer-m1 dme-miR-33-5p 2L + 2998383 2998438 3'utr CG3558 FlyBase G1128.1 TTAACGAACAATGCAGTTTTGAACAGATTTACAAGTTAATGCACACGGACTCAACT 11 2998421 0.886031998 7 11 49 1 1.301029996 0.05 0.545454545 0.75 11 0 0 20 2L:2998383-2998438 7 7 399 FBgn0025681 2409.06 69.7 106.8566667 0.002905698 0.100430416 0.065508313 -2 -1 -1.5 0.2 dme-miR-317-3p 7mer-A1 GTGTTCA 2L 2998524 2998530 + 2L_2998524_2998530_+ 0.823121715 0.823301551 0.823211633 0.000127209 CG3558 FBtr0331653|FBtr0077644|FBtr0273230|FBtr0077645 2998247|2998247|2998247|2998247 2998726|2998726|2998726|2998726 2L + 2998465 2998535 3'utr CG3558 FlyBase G1448.1 GCGTTAAACAAATAGATTTAGGTTAAATGTTTTAAGTGAATCGGGACGGTGGATCTTAAGTGTTCAGATGT 17 2998520 0.981275975 8 12 134 0.761904762 0.726998728 0.666666667 0.176470588 0.333333333 17 3 2 16 2L:2998465-2998535 7 CG3558 FBtr0273230|FBtr0077645|FBtr0331653|FBtr0077644 2998247|2998247|2998247|2998247 2998726|2998726|2998726|2998726 GTGTTCA 7mer-A1 dme-miR-317-3p 2L + 2998474 2998546 3'utr CG3558 FlyBase G1129.1 AAATAGATTTAGGTTAAATGTTTTAAGTGAATCGGGACGGTGGATCTTAAGTGTTCAGATGTAAACAAATATT 16 2998519 0.980150922 9 15 106 0.954545455 1.322219295 0.590909091 0.3125 0.5 16 1 0 21 2L:2998474-2998546 7 11.5 400 FBgn0025681 2409.06 69.7 106.8566667 0.004773646 0.164992826 0.1076208 4 5 4.5 0.2 dme-miR-8-3p 7mer-A1 AGTATTA 2L 2998696 2998702 + 2L_2998696_2998702_+ 0.702718519 0.771733577 0.737226048 0.048801045 CG3558 FBtr0331653|FBtr0077644|FBtr0273230|FBtr0077645 2998247|2998247|2998247|2998247 2998726|2998726|2998726|2998726 2L + 2998678 2998732 3'utr CG3558 FlyBase G1449.1 ATGTAAAGCCAACTTGAAAGTATTAAATTGGTCCAAGTAAATGCACAGCCAAGAA 15 2998691 0.959410576 6 15 77 1 1.230448921 0.235294118 0.133333333 0.235294118 15 0 0 17 2L:2998678-2998732 7 CG3558 FBtr0273230|FBtr0077645|FBtr0331653|FBtr0077644 2998247|2998247|2998247|2998247 2998726|2998726|2998726|2998726 AGTATTA 7mer-A1 dme-miR-8-3p 2L + 2998678 2998706 3'utr CG3558 FlyBase G1130.1 ATGTAAAGCCAACTTGAAAGTATTAAATT 6 2998691 0.835623903 3 6 41 1 0.77815125 0 0 0 6 0 0 6 2L:2998678-2998706 7 8.5 401 FBgn0025681 2409.06 69.7 106.8566667 0.003528347 0.12195122 0.079545809 5 5 5 0.2 dme-miR-8-3p 6mer2-7 AGTATT 2L 3021432 3021437 + 2L_3021432_3021437_+ 0.999859599 0.999802316 0.999830957 4.05E-05 CG17264 FBtr0331628|FBtr0077647 3021226|3021226 3021506|3021506 2L + 3021412 3021446 3'utr CG17264 FlyBase G1459.1 AAACTACAATGATTCAAAATAGTATTCTAAGCGAC 13 3021432 0.90615954 4 12 78 0.933333333 0.84509804 0.733333333 0.153846154 0.266666667 13 0 1 14 2L:3021412-3021446 6 CG17264 FBtr0077647|FBtr0331628 3021226|3021226 3021506|3021506 AGTATT 6mer2-7 dme-miR-8-3p 2L + 3021416 3021445 3'utr CG17264 FlyBase G1133.1 TACAATGATTCAAAATAGTATTCTAAGCGA 6 3021432 0.712939716 4 5 36 0.777777778 0.84509804 0.222222222 0.5 0.666666667 6 2 0 7 2L:3021416-3021445 6 8.5 402 FBgn0031490 217.3433333 9.67 14.60333333 0.03910863 0.879007239 0.582058891 0 0 0 0.2 dme-miR-79-3p 6mer3-8 TAGCTT 2L 302727 302732 + 2L_302727_302732_+ 0.999998172 0.997146932 0.998572552 0.002016174 Pi3K21B FBtr0331206|FBtr0331207|FBtr0331208|FBtr0331205 302658|302658|302658|302658 305233|305233|305233|303934 2L + 302653 302765 stop_codon Pi3K21B FlyBase G695.1 GCAGTAGGAGCCGCACATCAAATTGCCGCTAAACGAGCCCTCAACCTCAGGCTAGCTATCTATCTCTCTAATTCTAGCTTGCTCTAAAGCCCTAACTCTCTCTAACTCTAGAT 36 302699 0.976526844 18 35 229 0.976190476 1.612783857 0.119047619 0.138888889 0.261904762 36 1 0 41 2L:302653-302765 6 Pi3K21B FBtr0331205|FBtr0331208|FBtr0331207|FBtr0331206 302658|302658|302658|302658 303934|305233|305233|305233 TAGCTT 6mer3-8 dme-miR-79-3p 2L + 302658 302767 stop_codon Pi3K21B FlyBase G558.1 AGGAGCCGCACATCAAATTGCCGCTAAACGAGCCCTCAACCTCAGGCTAGCTATCTATCTCTCTAATTCTAGCTTGCTCTAAAGCCCTAACTCTCTCTAACTCTAGATAT 29 302705 0.982144712 11 24 172 0.833333333 1.602059991 0.083333333 0.413793103 0.645833333 29 8 0 40 2L:302658-302767 6 4 403 FBgn0020622 2718.376667 71.30333333 109.6833333 0.001471466 0.056098359 0.036468622 28 22 25 0.2 dme-miR-8-3p 6mer3-8 CAGTAT 2L 302832 302837 + 2L_302832_302837_+ 0.999912711 0.975616612 0.987764662 0.017179937 Pi3K21B FBtr0331206|FBtr0331207|FBtr0331208|FBtr0331205 302658|302658|302658|302658 305233|305233|305233|303934 2L + 302797 302837 3'utr Pi3K21B FlyBase G696.1 TGCAGGCTCTGTCAAAAGGCTTAAGCTGGATATGCCAGTAT 9 302805 0.746797221 6 8 53 1 0.954242509 0.555555556 0 0 9 0 0 9 2L:302797-302837 6 Pi3K21B FBtr0331205|FBtr0331208|FBtr0331207|FBtr0331206 302658|302658|302658|302658 303934|305233|305233|305233 CAGTAT 6mer3-8 dme-miR-8-3p 2L + 302797 302837 3'utr Pi3K21B FlyBase G559.1 TGCAGGCTCTGTCAAAAGGCTTAAGCTGGATATGCCAGTAT 8 302828 0.75013305 5 8 48 1 1.113943352 0.153846154 0.5 0.692307692 8 0 0 13 2L:302797-302837 6 4.5 404 FBgn0020622 2718.376667 71.30333333 109.6833333 0.0016554 0.063110654 0.0410272 27 4 15.5 0.2 dme-miR-11-3p 7mer-m1 TGTGATG 2L 303180 303186 + 2L_303180_303186_+ 0.538834114 0.600916884 0.569875499 0.043899169 Pi3K21B FBtr0331206|FBtr0331207|FBtr0331208|FBtr0331205 302658|302658|302658|302658 305233|305233|305233|303934 2L + 303070 303243 3'utr Pi3K21B FlyBase G697.1 TAGTGTTACAATAGCAATGCTATTATTTCGGCCATCGCCGATTGTGTACATCAGCATATATAGGCTATATATATATATATATATATATCTGTGCATGATTACTTTTTGTGTGTGATGGATGGCGCTGGCAGTTTAACTGCCCTCCGCTATCCCCTCAAGAATTAGACGGCTCCA 173 303178 0.991519902 24 148 1606 0.853658537 1.544068044 0.136585366 0.138728324 0.273170732 173 26 4 175 2L:303070-303243 7 Pi3K21B FBtr0331205|FBtr0331208|FBtr0331207|FBtr0331206 302658|302658|302658|302658 303934|305233|305233|305233 TGTGATG 7mer-m1 dme-miR-11-3p 2L + 303145 303247 3'utr Pi3K21B FlyBase G561.2 TATATATATATATCTGTGCATGATTACTTTTTGTGTGTGATGGATGGCGCTGGCAGTTTAACTGCCCTCCGCTATCCCCTCAAGAATTAGACGGCTCCAGAAA 109 303178 0.919607242 19 89 939 0.826086957 2.181843588 0.179347826 0.486238532 0.695652174 109 32 0 152 2L:303145-303247 7 116.5 405 FBgn0020622 2718.376667 71.30333333 109.6833333 0.04285646 1.633864709 1.06214861 2 2 2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2L 303748 303753 + 2L_303748_303753_+ 0.728672665 0.73087822 0.729775442 0.001559524 Pi3K21B FBtr0331206|FBtr0331206|FBtr0331206|FBtr0331207|FBtr0331207|FBtr0331207|FBtr0331208|FBtr0331208|FBtr0331208|FBtr0331205|FBtr0331205|FBtr0331205 302658|302658|302658|302658|302658|302658|302658|302658|302658|302658|302658|302658 305233|305233|305233|305233|305233|305233|305233|305233|305233|303934|303934|303934 2L + 303691 303792 3'utr Pi3K21B FlyBase G701.2 GTTATATTATAACTGATTTAAAGTAGTTTTAAGTGAAATCTACGTACGTTTACTCGATGTGATCAGTTGATTGTTGCTAACGTTAATTTTCCTTCAATTTTT 34 303741 0.719943953 16 30 334 0.909090909 1.124938737 0.295454545 0.264705882 0.431818182 34 2 2 40 2L:303691-303792 6 Pi3K21B FBtr0331205|FBtr0331205|FBtr0331205|FBtr0331208|FBtr0331208|FBtr0331208|FBtr0331207|FBtr0331207|FBtr0331207|FBtr0331206|FBtr0331206|FBtr0331206 302658|302658|302658|302658|302658|302658|302658|302658|302658|302658|302658|302658 303934|303934|303934|305233|305233|305233|305233|305233|305233|305233|305233|305233 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 303736 303790 3'utr Pi3K21B FlyBase G568.1 ACGTTTACTCGATGTGATCAGTTGATTGTTGCTAACGTTAATTTTCCTTCAATTT 14 303745 0.989052646 8 13 122 0.9375 1.176091259 0.5 0.142857143 0.25 14 1 0 15 2L:303736-303790 6 17 406 FBgn0020622 2718.376667 71.30333333 109.6833333 0.006253732 0.238418026 0.154991643 7 3 5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2L 304490 304495 + 2L_304490_304495_+ 0.902134453 0.995621682 0.948878068 0.066105433 Pi3K21B FBtr0331206|FBtr0331207|FBtr0331208 302658|302658|302658 305233|305233|305233 2L + 304332 304626 3'utr Pi3K21B FlyBase G704.1 CTTCGTAAGCGTGTTGAAAGAATGTTGACCTTTCTGTTTGCATTCTCCCTATTGAATTTGAGCGATCCACTTACTAGCACACACAAAAACTGTCGCGTCTTTAAGATATTCTTACATATATAAATTCGATGTATTCATTATACTGTATCTGCATACTTTACCTGTAATTCCTAATTTAACTTATTTAACTTGTAATTTGTGTGTTTCATTTTGCTTAAATTCTATGAGATTTTGGCGGATCTCGTACGTTGTAGTATTTATAAGTTTTAAATTTAGTTTGTAAAATGCGTTTCAA 146 304488 0.989493447 46 141 1371 0.960227273 1.926856709 0.159090909 0.164383562 0.306818182 146 6 1 169 2L:304332-304626 6 Pi3K21B FBtr0331208|FBtr0331207|FBtr0331206 302658|302658|302658 305233|305233|305233 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2L + 304421 304503 3'utr Pi3K21B FlyBase G569.1 CTGTCGCGTCTTTAAGATATTCTTACATATATAAATTCGATGTATTCATTATACTGTATCTGCATACTTTACCTGTAATTCCT 33 304489 0.988718234 10 32 306 0.978723404 1.361727836 0.063829787 0.303030303 0.510638298 33 0 1 46 2L:304421-304503 6 36 407 FBgn0020622 2718.376667 71.30333333 109.6833333 0.013243198 0.504885232 0.328217596 2 1 1.5 0.2 dme-miR-304-5p 7mer-m8 TGAGATT 2L 304556 304562 + 2L_304556_304562_+ 0.611957774 0.61056864 0.611263207 0.000982313 Pi3K21B FBtr0331206|FBtr0331207|FBtr0331208 302658|302658|302658 305233|305233|305233 2L + 304332 304626 3'utr Pi3K21B FlyBase G704.1 CTTCGTAAGCGTGTTGAAAGAATGTTGACCTTTCTGTTTGCATTCTCCCTATTGAATTTGAGCGATCCACTTACTAGCACACACAAAAACTGTCGCGTCTTTAAGATATTCTTACATATATAAATTCGATGTATTCATTATACTGTATCTGCATACTTTACCTGTAATTCCTAATTTAACTTATTTAACTTGTAATTTGTGTGTTTCATTTTGCTTAAATTCTATGAGATTTTGGCGGATCTCGTACGTTGTAGTATTTATAAGTTTTAAATTTAGTTTGTAAAATGCGTTTCAA 146 304563 0.989493447 46 141 1371 0.960227273 1.926856709 0.159090909 0.164383562 0.306818182 146 6 1 169 2L:304332-304626 7 Pi3K21B FBtr0331208|FBtr0331207|FBtr0331206 302658|302658|302658 305233|305233|305233 TGAGATT 7mer-m8 dme-miR-304-5p 2L + 304517 304610 3'utr Pi3K21B FlyBase G570.1 TAACTTGTAATTTGTGTGTTTCATTTTGCTTAAATTCTATGAGATTTTGGCGGATCTCGTACGTTGTAGTATTTATAAGTTTTAAATTTAGTTT 73 304563 0.69179169 20 68 661 0.919191919 1.658011397 0.272727273 0.273972603 0.464646465 73 7 1 91 2L:304517-304610 7 54 408 FBgn0020622 2718.376667 71.30333333 109.6833333 0.019864797 0.757327848 0.492326394 -7 -7 -7 0.2 dme-miR-263a-5p 7mer-A1 TGCCATA 2L 304774 304780 + 2L_304774_304780_+ 0.623206995 0.779681211 0.701444103 0.110643968 Pi3K21B FBtr0331206|FBtr0331207|FBtr0331208 302658|302658|302658 305233|305233|305233 2L + 304745 304810 3'utr Pi3K21B FlyBase G705.2 TGTTTGCTAACTGATAGATGATGACTTTTTGCCATACCTAAATGTTAAATGGAAATATTTGTGAAT 43 304772 0.636625074 15 35 275 0.903846154 1.672097858 0.173076923 0.238095238 0.384615385 42 5 0 47 2L:304745-304810 7 Pi3K21B FBtr0331208|FBtr0331207|FBtr0331206 302658|302658|302658 305233|305233|305233 TGCCATA 7mer-A1 dme-miR-263a-5p 2L + 304736 304779 3'utr Pi3K21B FlyBase G571.1 TGTCAATAATGTTTGCTAACTGATAGATGATGACTTTTTGCCAT 13 304772 0.928410656 5 13 99 1 1.361727836 0.217391304 0.538461538 0.739130435 13 0 0 23 2L:304736-304779 6 13 409 FBgn0020622 2718.376667 71.30333333 109.6833333 0.004782266 0.182319667 0.118523021 2 2 2 0.2 dme-miR-1007-3p 6mer3-8 TGAGCT 2L 3067672 3067677 + 2L_3067672_3067677_+ 0.842430987 0.496756577 0.669593782 0.244428712 CG3523 FBtr0077659|FBtr0335387 3067501|3067501 3068177|3068177 2L + 3067555 3067688 3'utr CG3523 FlyBase G1510.1 CACACGATCATCACCCTCTCACCGTCACTCACCCAATACTCGGGTTCTATGCACCATGTGGAACCACGGAACACATCGACACCTAGTTAGCATACTTAGTGAATGAATTTACGTTGTTGAGCTGCAAGGAATGG 130 3067671 0.778646916 26 119 768 0.917721519 1.860338007 0.462025316 0.169230769 0.316455696 130 12 1 145 2L:3067555-3067688 6 CG3523 FBtr0077659|FBtr0335387 3067501|3067501 3068177|3068177 TGAGCT 6mer3-8 dme-miR-1007-3p 2L + 3067591 3067689 3'utr CG3523 FlyBase G1189.1 TACTCGGGTTCTATGCACCATGTGGAACCACGGAACACATCGACACCTAGTTAGCATACTTAGTGAATGAATTTACGTTGTTGAGCTGCAAGGAATGGC 101 3067670 0.777651789 18 92 615 0.926666667 1.36486355 0.48 0.366336634 0.573333333 101 6 5 139 2L:3067591-3067689 6 51.5 410 FBgn0027571 21016.13 290.6166667 443.8066667 0.002450499 0.177209382 0.11604152 1 2 1.5 0.2 dme-miR-999-3p 8mer-A1 AGTTAACA 2L 3067726 3067733 + 2L_3067726_3067733_+ 0.482067044 0.429716261 0.455891653 0.037017535 CG3523 FBtr0077659|FBtr0335387 3067501|3067501 3068177|3068177 2L + 3067730 3067796 3'utr CG3523 FlyBase G1511.1 AACAGATTGGATTTGCGTCGATCGGATTGAATCTGCCTAACTGCTGTCTTGCAGGGCTGTAGGCTTC 26 3067740 0.797891894 13 22 221 0.833333333 1.096910013 0.366666667 0.153846154 0.266666667 26 4 1 25 2L:3067730-3067796 3 CG3523 FBtr0077659|FBtr0335387 3067501|3067501 3068177|3068177 AGTTAACA 8mer-A1 dme-miR-999-3p 2L + 3067730 3067795 3'utr CG3523 FlyBase G1190.1 AACAGATTGGATTTGCGTCGATCGGATTGAATCTGCCTAACTGCTGTCTTGCAGGGCTGTAGGCTT 17 3067741 0.711409244 10 14 135 0.884615385 1.06069784 0.269230769 0.352941176 0.576923077 17 2 1 23 2L:3067730-3067795 3 7.5 411 FBgn0027571 21016.13 290.6166667 443.8066667 0.000356869 0.025807192 0.01689925 -14 -15 -14.5 0.2 dme-bantam-3p 6mer3-8 TGATCT 2L 3146647 3146652 - 2L_3146647_3146652_- 0.966923792 0.99999565 0.983459721 0.023385365 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 2L - 3146626 3146721 3'utr Mad FlyBase G7252.1 ACAAGAAAAGATACCAGCGAAATTTAAGAATGGAAAAATGCTACTGAATCAATACGTTTTCCCAGACAATGATCTTTTGTTATCTTAAGTAAAACT 178 3146652 0.950769641 8 175 1917 0.985294118 2.002166062 0.191176471 0.129213483 0.240196078 178 2 1 201 2L:3146626-3146721 6 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 TGATCT 6mer3-8 dme-bantam-3p 2L - 3146580 3146719 3'utr Mad FlyBase G5672.1 AAGAAAAGATACCAGCGAAATTTAAGAATGGAAAAATGCTACTGAATCAATACGTTTTCCCAGACAATGATCTTTTGTTATCTTAAGTAAAACTAATATTGTTTAGACCACGAGAAAATTGCCTTTTTATATAAATATAC 152 3146651 0.999995364 13 148 1524 0.981981982 2.037426498 0.256756757 0.322368421 0.536036036 152 3 1 218 2L:3146580-3146719 6 145.5 412 FBgn0011648 490.6766667 21.49 32.97333333 0.296529283 6.770590973 4.412656692 0 -1 -0.5 0.2 dme-miR-980-3p 8mer-A1 GGCAGCTA 2L 3147213 3147220 - 2L_3147213_3147220_- 0.668726238 0.653791777 0.661259008 0.010560216 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 2L - 3147182 3147243 3'utr Mad FlyBase G7255.1 GCAGATTTATATAGATGATGTACGGCAGCTACTCCAATACCCGCCCTTTGCCCATATTTTAT 71 3147227 0.718320133 9 68 366 0.962962963 1.892094603 0.209876543 0.14084507 0.24691358 71 3 0 78 2L:3147182-3147243 8 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 GGCAGCTA 8mer-A1 dme-miR-980-3p 2L - 3147149 3147239 3'utr Mad FlyBase G5675.1 ATTTATATAGATGATGTACGGCAGCTACTCCAATACCCGCCCTTTGCCCATATTTTATAGTTTATCGTATGATTTTCTATGCGAATGTCAT 46 3147227 0.969233548 12 44 259 0.971428571 1.832508913 0.285714286 0.347826087 0.571428571 46 2 0 68 2L:3147149-3147239 8 54 413 FBgn0011648 490.6766667 21.49 32.97333333 0.110052105 2.51279665 1.63768702 7 7 7 0.2 dme-miR-2a-2-5p 7mer-m1 GATGAGG 2L 3147406 3147412 - 2L_3147406_3147412_- 0.821153555 0.82393978 0.822546668 0.001970141 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 2L - 3147378 3147481 stop_codon Mad FlyBase G7257.1 TGGCTGGACAAGGTGCTCACCCAAATGGGCTCTCCGCATAATGCAATTAGTTCGGTATCCTAAGCTTAAGATGAGGCTCGAGTCCTCAATGGAGACGGAAGAGA 24 3147410 0.967203984 9 23 127 0.965517241 1.146128036 0.172413793 0.208333333 0.344827586 24 0 1 28 2L:3147378-3147481 7 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 GATGAGG 7mer-m1 dme-miR-2a-2-5p 2L - 3147351 3147459 stop_codon Mad FlyBase G5677.1 AAATGGGCTCTCCGCATAATGCAATTAGTTCGGTATCCTAAGCTTAAGATGAGGCTCGAGTCCTCAATGGAGACGGAAGAGAAGGAACACAAAACCGGTAGCTAAATGA 19 3147410 0.994928317 8 18 109 0.942857143 1.51851394 0.2 0.578947368 0.771428571 19 2 0 33 2L:3147351-3147459 7 9 414 FBgn0011648 490.6766667 21.49 32.97333333 0.018342017 0.418799442 0.272947837 -2 -2 -2 0.2 dme-miR-307a-3p 6mer3-8 GGTTGT 2L 3168259 3168264 + 2L_3168259_3168264_+ 0.994630083 0.987334348 0.990982216 0.00515891 Hydr2 FBtr0332371|FBtr0077576|FBtr0308315 3168200|3168200|3168200 3168988|3168988|3169462 2L + 3168216 3168275 3'utr Hydr2 FlyBase G1531.1 TTCACACGCATACACGACTATTTAACGCTTCTGTGTCAAAATTGGTTGTCGCTGTCGAAT 30 3168258 0.985161205 8 29 235 0.972222222 1.544068044 0.5 0.133333333 0.277777778 30 1 0 35 2L:3168216-3168275 6 Hydr2 FBtr0308315|FBtr0077576|FBtr0332371 3168200|3168200|3168200 3169462|3168988|3168988 GGTTGT 6mer3-8 dme-miR-307a-3p 2L + 3168222 3168365 3'utr Hydr2 FlyBase G1204.1 CGCATACACGACTATTTAACGCTTCTGTGTCAAAATTGGTTGTCGCTGTCGAATATAAATCTTTGAAGAACCATCGGAACGGAAGAGAGCCCGAAAGACCCCATACATATAGTTCTAACATATGATATCGTTGTGCAGCAATTA 33 3168258 0.980669903 16 32 232 0.94 1.672097858 0.46 0.363636364 0.58 33 3 0 47 2L:3168222-3168365 6 14 415 FBgn0014906 1672.66 89.72666667 137.1866667 0.008369902 0.156029423 0.102050734 1 1 1 0.2 dme-miR-283-5p 6mer3-8 TGATAT 2L 3168344 3168349 + 2L_3168344_3168349_+ 0.904278583 0.864348006 0.884313295 0.028235198 Hydr2 FBtr0332371|FBtr0077576|FBtr0308315 3168200|3168200|3168200 3168988|3168988|3169462 2L + 3168295 3168389 3'utr Hydr2 FlyBase G1532.1 TCGGAACGGAAGAGAGCCCGAAAGACCCCATACATATAGTTCTAACATATGATATCGTTGTGCAGCAATTATAAATTATCAGCCGCGCAAGCATA 19 3168344 0.978478789 10 19 126 1 1.447158031 0.071428571 0.368421053 0.571428571 19 0 0 28 2L:3168295-3168389 6 Hydr2 FBtr0308315|FBtr0077576|FBtr0332371 3168200|3168200|3168200 3169462|3168988|3168988 TGATAT 6mer3-8 dme-miR-283-5p 2L + 3168222 3168365 3'utr Hydr2 FlyBase G1204.1 CGCATACACGACTATTTAACGCTTCTGTGTCAAAATTGGTTGTCGCTGTCGAATATAAATCTTTGAAGAACCATCGGAACGGAAGAGAGCCCGAAAGACCCCATACATATAGTTCTAACATATGATATCGTTGTGCAGCAATTA 33 3168351 0.980669903 16 32 232 0.94 1.672097858 0.46 0.363636364 0.58 33 3 0 47 2L:3168222-3168365 6 13 416 FBgn0014906 1672.66 89.72666667 137.1866667 0.007772052 0.144884464 0.094761396 0 -7 -3.5 0.2 dme-miR-999-3p 7mer-m8 AGTTAAC 2L 3168520 3168526 + 2L_3168520_3168526_+ 0.511345668 0.520420222 0.515882945 0.00641664 Hydr2 FBtr0332371|FBtr0077576|FBtr0308315 3168200|3168200|3168200 3168988|3168988|3169462 2L + 3168484 3168563 3'utr Hydr2 FlyBase G1533.2 AACATACAATGTATCAGTTGAACTCGTACCTTAGTTAGTTAACGCGACCACATGTATCCATGTACTTATGTCTAAGCAAA 91 3168518 0.772219073 15 84 750 0.946902655 1.728353782 0.17699115 0.131868132 0.300884956 91 5 1 107 2L:3168484-3168563 7 Hydr2 FBtr0308315|FBtr0077576|FBtr0332371 3168200|3168200|3168200 3169462|3168988|3168988 AGTTAAC 7mer-m8 dme-miR-999-3p 2L + 3168444 3168561 3'utr Hydr2 FlyBase G1205.1 GAACGATTTTTATGCTTTTTAATGACTTTTTGAAGAGCCAAACATACAATGTATCAGTTGAACTCGTACCTTAGTTAGTTAACGCGACCACATGTATCCATGTACTTATGTCTAAGCA 56 3168517 0.985954201 15 52 438 0.91011236 1.063386979 0.101123596 0.339285714 0.584269663 56 2 6 81 2L:3168444-3168561 7 44.5 417 FBgn0014906 1672.66 89.72666667 137.1866667 0.026604331 0.495950665 0.324375547 2 3 2.5 0.2 dme-bantam-3p 6mer3-8 TGATCT 2L 3359554 3359559 - 2L_3359554_3359559_- 0.991910576 0.95161437 0.971762473 0.028493716 CG34394 FBtr0332409|FBtr0306333|FBtr0306335|FBtr0112638|FBtr0112641|FBtr0112639 3358638|3358638|3358638|3358638|3358638|3358638 3360717|3360717|3360717|3360717|3360717|3360717 2L - 3359525 3359578 3'utr CG34394 FlyBase G7275.1 GGTAAGAAAAGCGCGTGTATGATCTAAGTAGCTGCATTTTAGTTAGACTAGAGC 13 3359561 0.980829675 6 11 77 0.923076923 1.079181246 0.461538462 0 0 13 1 0 12 2L:3359525-3359578 6 CG34394 FBtr0112638|FBtr0306335|FBtr0306333|FBtr0332409|FBtr0112639|FBtr0112641 3358638|3358638|3358638|3358638|3358638|3358638 3360717|3360717|3360717|3360717|3360717|3360717 TGATCT 6mer3-8 dme-bantam-3p 2L - 3359526 3359586 3'utr CG34394 FlyBase G5688.1 GTTTTAATGGTAAGAAAAGCGCGTGTATGATCTAAGTAGCTGCATTTTAGTTAGACTAGAG 14 3359560 0.717420369 5 13 94 0.941176471 0.903089987 0.294117647 0.214285714 0.352941176 14 0 1 16 2L:3359526-3359586 6 10 418 FBgn0085423 1284.263333 25.49333333 39.12 0.007786565 0.392259414 0.255623722 2 1 1.5 0.2 dme-miR-317-5p 8mer-A1 GTATCCCA 2L 3360255 3360262 - 2L_3360255_3360262_- 0.669848351 0.655844445 0.662846398 0.009902323 CG34394 FBtr0332409|FBtr0306333|FBtr0306335|FBtr0112638|FBtr0112641|FBtr0112639 3358638|3358638|3358638|3358638|3358638|3358638 3360717|3360717|3360717|3360717|3360717|3360717 2L - 3360240 3360304 3'utr CG34394 FlyBase G7281.2 ATCCTCTGACACTGAATGTTAAGGTTAATGTTGAAAATTCATGTATCCCAATCAAGGTTTAACCT 11 3360246 0.789631528 5 9 69 0.785714286 1.041392685 0.142857143 0.181818182 0.357142857 11 3 0 11 2L:3360240-3360304 8 CG34394 FBtr0112638|FBtr0306335|FBtr0306333|FBtr0332409|FBtr0112639|FBtr0112641 3358638|3358638|3358638|3358638|3358638|3358638 3360717|3360717|3360717|3360717|3360717|3360717 GTATCCCA 8mer-A1 dme-miR-317-5p 2L - 3360239 3360291 3'utr CG34394 FlyBase G5692.1 GAATGTTAAGGTTAATGTTGAAAATTCATGTATCCCAATCAAGGTTTAACCTA 10 3360246 0.977205411 3 9 61 1 1.146128036 0.142857143 0.3 0.5 10 0 0 14 2L:3360239-3360291 8 7 419 FBgn0085423 1284.263333 25.49333333 39.12 0.005450596 0.27458159 0.178936605 -16 -16 -16 0.2 dme-bantam-3p 7mer-m8 TGATCTC 2L 3360367 3360373 - 2L_3360367_3360373_- 0.660871939 0.66114828 0.661010109 0.000195444 CG34394 FBtr0332409|FBtr0306333|FBtr0306335|FBtr0112638|FBtr0112641|FBtr0112639 3358638|3358638|3358638|3358638|3358638|3358638 3360717|3360717|3360717|3360717|3360717|3360717 2L - 3360306 3360421 3'utr CG34394 FlyBase G7282.1 AGGTCTGATAGTTTTGAAACGCACTGCACCAGCGGGCATTTGTTACTTTGATCTCCTAGTTAGCAATACACAAAACCCAAACTTGTGCATGTTCTATTCTCTCGGATTAAGATACA 496 3360374 0.807763879 18 476 5025 0.961148649 2.056142262 0.336148649 0.157258065 0.293918919 496 19 4 569 2L:3360306-3360421 7 CG34394 FBtr0112638|FBtr0306335|FBtr0306333|FBtr0332409|FBtr0112639|FBtr0112641 3358638|3358638|3358638|3358638|3358638|3358638 3360717|3360717|3360717|3360717|3360717|3360717 TGATCTC 7mer-m8 dme-bantam-3p 2L - 3360345 3360423 3'utr CG34394 FlyBase G5693.1 AAAGGTCTGATAGTTTTGAAACGCACTGCACCAGCGGGCATTTGTTACTTTGATCTCCTAGTTAGCAATACACAAAACC 266 3360374 0.720383739 16 249 2609 0.938931298 1.721928326 0.361323155 0.342105263 0.554707379 266 18 6 369 2L:3360345-3360423 7 367 420 FBgn0085423 1284.263333 25.49333333 39.12 0.285766938 14.3959205 9.381390593 1 1 1 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 3405151 3405157 - 2L_3405151_3405157_- 0.658178081 0.658395868 0.658286975 0.000154008 pgant2 FBtr0077592|FBtr0303992 3404458|3404458 3405576|3405576 2L - 3405145 3405180 3'utr pgant2 FlyBase G7299.1 ACTGTAACCCTAATGCAACCTTTGGCAGCTGATTAA 63 3405158 0.75787803 3 62 395 0.975308642 1.897627091 0.086419753 0.19047619 0.37037037 63 2 0 79 2L:3405145-3405180 7 pgant2 FBtr0077592|FBtr0303992 3404458|3404458 3405576|3405576 GGCAGCT 7mer-m8 dme-miR-980-3p 2L - 3405145 3405181 3'utr pgant2 FlyBase G5706.1 TACTGTAACCCTAATGCAACCTTTGGCAGCTGATTAA 60 3405158 0.740495215 5 59 373 0.978021978 1.949390007 0.131868132 0.366666667 0.582417582 60 2 0 89 2L:3405145-3405181 7 61.5 421 FBgn0031530 60.33333333 2.156666667 3.27 1.019337017 28.51622875 18.80733945 1 1 1 0.2 dme-miR-14-3p 7mer-A1 AGACTGA 2L 3405235 3405241 - 2L_3405235_3405241_- 0.410234037 0.515069847 0.462651942 0.074130105 pgant2 FBtr0077592|FBtr0303992 3404458|3404458 3405576|3405576 2L - 3405214 3405267 3'utr pgant2 FlyBase G7300.1 ATAAAGGGCATACAAAAAACGTACTTAGACTGATTAATTTTTTGTATATGTATA 57 3405243 0.833765255 4 55 503 0.971830986 1.537819095 0.014084507 0.228070175 0.38028169 57 1 1 69 2L:3405214-3405267 7 pgant2 FBtr0077592|FBtr0303992 3404458|3404458 3405576|3405576 AGACTGA 7mer-A1 dme-miR-14-3p 2L - 3405221 3405267 3'utr pgant2 FlyBase G5707.1 ATAAAGGGCATACAAAAAACGTACTTAGACTGATTAATTTTTTGTAT 44 3405243 0.985200751 3 42 347 0.9 1.799340549 0.071428571 0.363636364 0.6 44 7 0 63 2L:3405221-3405267 7 50 422 FBgn0031530 60.33333333 2.156666667 3.27 0.828729282 23.18392581 15.29051988 2 2 2 0.2 dme-miR-965-3p 7mer-m8 TACGCTT 2L 3453778 3453784 - 2L_3453778_3453784_- 0.62009103 0.620204635 0.620147832 8.03E-05 Cog3 FBtr0077573 3453695 3453922 2L - 3453757 3453799 3'utr Cog3 FlyBase G7302.1 GTGTTAAAAACTATCTACGCTTTCCAAATGTAGACTTAACATT 14 3453784 0.751685691 4 12 103 0.875 0.84509804 0.375 0.142857143 0.25 14 1 1 14 2L:3453757-3453799 7 Cog3 FBtr0077573 3453695 3453922 TACGCTT 7mer-m8 dme-miR-965-3p 2L - 3453748 3453806 3'utr Cog3 FlyBase G5709.1 AAGATCCGTGTTAAAAACTATCTACGCTTTCCAAATGTAGACTTAACATTAATTTATTT 13 3453784 0.745647707 7 10 101 0.842105263 1.204119983 0.315789474 0.384615385 0.578947368 13 3 0 16 2L:3453748-3453806 7 11 423 FBgn0031536 124 5.03 7.693333333 0.088709677 2.186878728 1.429809359 0 0 0 0.2 dme-miR-8-3p 7mer-m8 CAGTATT 2L 345528 345534 + 2L_345528_345534_+ 0.597726231 0.641972171 0.619849201 0.031286647 Plc21C FBtr0078049|FBtr0078050|FBtr0330674|FBtr0078047|FBtr0330673|FBtr0078048 345447|345447|345447|345447|345447|345447 355566|347927|346255|346255|346255|346541 2L + 345515 345564 3'utr Plc21C FlyBase G717.1 AGTTGTTAGTCTTCAGTATTTACAGCAGAAACATAGGAATGAAAAGTCTT 12 345527 0.994932734 5 11 76 0.933333333 1.146128036 0.2 0.25 0.4 12 1 0 14 2L:345515-345564 7 Plc21C FBtr0330673|FBtr0078048|FBtr0330674|FBtr0078047|FBtr0078049|FBtr0078050 345447|345447|345447|345447|345447|345447 346255|346541|346255|346255|355566|347927 CAGTATT 7mer-m8 dme-miR-8-3p 2L + 345491 345555 3'utr Plc21C FlyBase G579.1 CCCTAGGATTAATTGTGGTTCTAAAGTTGTTAGTCTTCAGTATTTACAGCAGAAACATAGGAATG 9 345526 0.989069386 6 8 50 0.923076923 1.079181246 0.461538462 0.222222222 0.461538462 9 1 0 12 2L:345491-345555 7 7.5 424 FBgn0004611 260.3233333 5.52 8.483333333 0.028810326 1.358695652 0.884086444 1 2 1.5 0.2 dme-miR-307a-3p 7mer-m8 GGTTGTG 2L 346001 346007 + 2L_346001_346007_+ 0.681189994 0.702485633 0.691837814 0.015058263 Plc21C FBtr0078049|FBtr0078050|FBtr0330674|FBtr0078047|FBtr0330673|FBtr0078048 345447|345447|345447|345447|345447|345447 355566|347927|346255|346255|346255|346541 2L + 345963 346020 3'utr Plc21C FlyBase G719.1 AAGGAGACTGAGTGCTCCATTTGTCTAATGCTAATTGTGGTTGTGTGTATTTTACATC 26 345999 0.991496352 7 26 279 1 1.505149978 0.09375 0.192307692 0.34375 26 0 0 32 2L:345963-346020 7 Plc21C FBtr0330673|FBtr0078048|FBtr0330674|FBtr0078047|FBtr0078049|FBtr0078050 345447|345447|345447|345447|345447|345447 346255|346541|346255|346255|355566|347927 GGTTGTG 7mer-m8 dme-miR-307a-3p 2L + 345983 346022 3'utr Plc21C FlyBase G581.1 TTGTCTAATGCTAATTGTGGTTGTGTGTATTTTACATCAG 16 346001 0.701867721 5 15 177 0.964285714 1.431363764 0.321428571 0.5 0.714285714 16 1 0 27 2L:345983-346022 7 20.5 425 FBgn0004611 260.3233333 5.52 8.483333333 0.078748223 3.713768116 2.416502947 2 0 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 3462415 3462420 - 2L_3462415_3462420_- 0.695324126 0.686928008 0.691126067 0.005936939 msl-2 FBtr0077571|FBtr0077571|FBtr0077571|FBtr0077570|FBtr0077570|FBtr0077570 3462216|3462216|3462216|3462216|3462216|3462216 3463265|3463265|3463265|3463265|3463265|3463265 2L - 3462400 3462446 3'utr msl-2 FlyBase G7309.1 AGATTGCTTTGCCCAAAATGTGGATGCTGTGAGCTAAAAAAAACCTT 15 3462422 0.9208458 6 13 86 0.9375 0.875061263 0.375 0.066666667 0.125 15 0 1 15 2L:3462400-3462446 6 msl-2 FBtr0077570|FBtr0077570|FBtr0077570|FBtr0077571|FBtr0077571|FBtr0077571 3462216|3462216|3462216|3462216|3462216|3462216 3463265|3463265|3463265|3463265|3463265|3463265 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 3462403 3462446 3'utr msl-2 FlyBase G5714.1 AGATTGCTTTGCCCAAAATGTGGATGCTGTGAGCTAAAAAAAAC 10 3462421 0.692380795 4 10 60 1 1.113943352 0.230769231 0.3 0.461538462 10 0 0 13 2L:3462403-3462446 6 12 426 FBgn0005616 482.6633333 15.65666667 24.13 0.02486205 0.766446668 0.497306258 2 1 1.5 0.2 dme-miR-970-3p 6mer3-8 TCTTAT 2L 3463113 3463118 - 2L_3463113_3463118_- 0.916913822 0.928183776 0.922548799 0.007969093 msl-2 FBtr0077571|FBtr0077570 3462216|3462216 3463265|3463265 2L - 3463090 3463151 3'utr msl-2 FlyBase G7313.1 ATTGCATCCATAACGTGGTATCGTCTTTGATCCTCTTATCATACCCGTTATTCGTAGAGTAA 141 3463124 0.750628951 15 118 1573 0.825301205 1.437750563 0.228915663 0.163120567 0.289156627 141 25 4 137 2L:3463090-3463151 6 msl-2 FBtr0077570|FBtr0077571 3462216|3462216 3463265|3463265 TCTTAT 6mer3-8 dme-miR-970-3p 2L - 3463089 3463149 3'utr msl-2 FlyBase G5717.1 TGCATCCATAACGTGGTATCGTCTTTGATCCTCTTATCATACCCGTTATTCGTAGAGTAAA 105 3463124 0.757283674 12 82 1058 0.781456954 2.071882007 0.145695364 0.342857143 0.543046358 105 33 0 118 2L:3463089-3463149 6 121.5 427 FBgn0005616 482.6633333 15.65666667 24.13 0.251728258 7.760272514 5.03522586 6 6 6 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 3621106 3621111 + 2L_3621106_3621111_+ 0.996878428 0.992674927 0.994776678 0.002972323 Dot FBtr0339571|FBtr0339571|FBtr0339571|FBtr0077532|FBtr0077532|FBtr0077532 3621072|3621072|3621072|3621072|3621072|3621072 3621573|3621573|3621573|3621171|3621171|3621171 2L + 3621087 3621126 3'utr Dot FlyBase G1591.1 ACGCATGACTTGACAATTTCTGTGACAACAAATATATATA 17 3621104 0.636724767 6 16 116 0.947368421 1.255272505 0 0.117647059 0.210526316 17 1 0 18 2L:3621087-3621126 6 Dot FBtr0339571|FBtr0339571|FBtr0339571|FBtr0077532|FBtr0077532|FBtr0077532 3621072|3621072|3621072|3621072|3621072|3621072 3621573|3621573|3621573|3621171|3621171|3621171 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 3621080 3621128 3'utr Dot FlyBase G1254.1 AAGATTTACGCATGACTTGACAATTTCTGTGACAACAAATATATATATT 12 3621104 0.95693276 5 12 93 1 1.230448921 0 0.333333333 0.529411765 12 0 0 17 2L:3621080-3621128 6 13.5 428 FBgn0015663 146.7833333 8.573333333 13.06 0.091972295 1.574650078 1.033690658 2 2 2 0.2 dme-miR-932-5p 8mer-A1 GGAATTGA 2L 3622414 3622421 - 2L_3622414_3622421_- 0.674935191 0.674840915 0.674888053 6.67E-05 for FBtr0089307|FBtr0089304|FBtr0089310|FBtr0089312|FBtr0089306|FBtr0089308|FBtr0089309|FBtr0100363 3622072|3622072|3622072|3622072|3622072|3622072|3622072|3622072 3622777|3622777|3622777|3622777|3622777|3622777|3622777|3622777 2L - 3622326 3622437 3'utr for FlyBase G7353.1 TGTGTCTAGTTCGCTTGGAATTGATGTAAATTGTAAGTAGGTCTGTGACTCTGTTTCAGAGCTCTGTTAGCCATGTGCATTGTATAAATTCAGCTATTTGTATCTATTAAAT 19 3622422 0.990417228 8 17 176 0.92 1.361727836 0.24 0.210526316 0.4 19 2 0 23 2L:3622326-3622437 8 for FBtr0100363|FBtr0089306|FBtr0089308|FBtr0089309|FBtr0089310|FBtr0089312|FBtr0089307|FBtr0089304 3622072|3622072|3622072|3622072|3622072|3622072|3622072|3622072 3622777|3622777|3622777|3622777|3622777|3622777|3622777|3622777 GGAATTGA 8mer-A1 dme-miR-932-5p 2L - 3622394 3622443 3'utr for FlyBase G5751.1 GATATATGTGTCTAGTTCGCTTGGAATTGATGTAAATTGTAAGTAGGTCT 7 3622422 0.992924074 3 5 69 0.888888889 0.903089987 0.222222222 0.142857143 0.333333333 7 1 0 8 2L:3622394-3622443 8 10 429 FBgn0000721 694.3333333 18.66333333 28.79666667 0.014402304 0.535809966 0.347262415 1 1 1 0.2 dme-bantam-3p 6mer3-8 TGATCT 2L 3622683 3622688 - 2L_3622683_3622688_- 0.531622625 0.522081125 0.526851875 0.006746859 for FBtr0089307|FBtr0089304|FBtr0089310|FBtr0089312|FBtr0089306|FBtr0089308|FBtr0089309|FBtr0100363|FBtr0301399 3622072|3622072|3622072|3622072|3622072|3622072|3622072|3622072|3622615 3622777|3622777|3622777|3622777|3622777|3622777|3622777|3622777|3622777 2L - 3622657 3622710 5'utr for FlyBase G7355.1 ATGAAAGCCAGGGAAGAAAAATTGATCTTAAGTGCGCCATATGTACGCCAAAGC 111 3622689 0.961736445 4 110 552 0.992 1.792391689 0.24 0.108108108 0.208 111 0 1 124 2L:3622657-3622710 6 for FBtr0100363|FBtr0301399|FBtr0089306|FBtr0089308|FBtr0089309|FBtr0089310|FBtr0089312|FBtr0089307|FBtr0089304 3622072|3622615|3622072|3622072|3622072|3622072|3622072|3622072|3622072 3622777|3622777|3622777|3622777|3622777|3622777|3622777|3622777|3622777 TGATCT 6mer3-8 dme-bantam-3p 2L - 3622654 3622706 5'utr for FlyBase G5752.1 AAGCCAGGGAAGAAAAATTGATCTTAAGTGCGCCATATGTACGCCAAAGCCAA 83 3622689 0.960144891 4 79 388 0.966101695 1.45484486 0.288135593 0.337349398 0.533898305 83 1 3 114 2L:3622654-3622706 6 96 430 FBgn0000721 694.3333333 18.66333333 28.79666667 0.138262122 5.143775674 3.33371918 1 1 1 0.2 dme-miR-305-5p 8mer-m1 AGTACAAT 2L 3783588 3783595 + 2L_3783588_3783595_+ 0.568718549 0.569530231 0.56912439 0.000573959 bowl FBtr0307029|FBtr0077490|FBtr0307027|FBtr0077492|FBtr0077491|FBtr0077493|FBtr0307028 3783283|3783283|3783283|3783283|3783283|3783283|3783283 3784121|3784121|3784121|3784121|3784121|3784121|3784121 2L + 3783564 3783645 3'utr bowl FlyBase G1619.1 TAGATCTACAATTTAATACTTTTTAGTACAATGTCTAGGCAAGGCAATAGACCTAAACTAAGTAATAAAATCAGTTAAGCGA 121 3783586 0.989399388 13 111 1090 0.935714286 1.8162413 0.192857143 0.123966942 0.242857143 121 8 1 131 2L:3783564-3783645 8 bowl FBtr0077491|FBtr0077493|FBtr0307028|FBtr0307029|FBtr0077490|FBtr0307027|FBtr0077492 3783283|3783283|3783283|3783283|3783283|3783283|3783283 3784121|3784121|3784121|3784121|3784121|3784121|3784121 AGTACAAT 8mer-m1 dme-miR-305-5p 2L + 3783538 3783704 3'utr bowl FlyBase G1283.1 GACCCACAAGTACATTAAAATAAATTTAGATCTACAATTTAATACTTTTTAGTACAATGTCTAGGCAAGGCAATAGACCTAAACTAAGTAATAAAATCAGTTAAGCGATAATTGTAAGCGAAACAAACTCCGTTGTTGCATTTTATAGAGCTCTTATGCGTTAGGAT 171 3783586 0.834758409 17 161 1556 0.937743191 1.603865792 0.155642023 0.385964912 0.591439689 171 11 5 241 2L:3783538-3783704 8 92.5 431 FBgn0004893 346.31 11.79 17.92333333 0.26710173 7.845631891 5.160870374 2 2 2 0.2 dme-miR-277-3p 7mer-m8 TGCATTT 2L 3783674 3783680 + 2L_3783674_3783680_+ 0.581093892 0.568041584 0.574567738 0.00922937 bowl FBtr0307029|FBtr0077490|FBtr0307027|FBtr0077492|FBtr0077491|FBtr0077493|FBtr0307028 3783283|3783283|3783283|3783283|3783283|3783283|3783283 3784121|3784121|3784121|3784121|3784121|3784121|3784121 2L + 3783646 3783859 3'utr bowl FlyBase G1619.2 TAATTGTAAGCGAAACAAACTCCGTTGTTGCATTTTATAGAGCTCTTATGCGTTAGGATTTTAGCTTAAATCTACCGATTTAAATGTTTAAGCCTTTAGTACGAGAGTCTATCGATTAGTTTTTAATGTGTGGCCCAACACTAAGTGTTGCTGTTTGCTGAGTGAATTCCAATTTTTTATTTATGTTTCCTTATCCGGTAAGCTAATCTTAATG 182 3783673 0.98939516 33 169 1736 0.925925926 1.698970004 0.162037037 0.159340659 0.291666667 182 13 3 200 2L:3783646-3783859 7 bowl FBtr0077491|FBtr0077493|FBtr0307028|FBtr0307029|FBtr0077490|FBtr0307027|FBtr0077492 3783283|3783283|3783283|3783283|3783283|3783283|3783283 3784121|3784121|3784121|3784121|3784121|3784121|3784121 TGCATTT 7mer-m8 dme-miR-277-3p 2L + 3783538 3783704 3'utr bowl FlyBase G1283.1 GACCCACAAGTACATTAAAATAAATTTAGATCTACAATTTAATACTTTTTAGTACAATGTCTAGGCAAGGCAATAGACCTAAACTAAGTAATAAAATCAGTTAAGCGATAATTGTAAGCGAAACAAACTCCGTTGTTGCATTTTATAGAGCTCTTATGCGTTAGGAT 171 3783673 0.834758409 17 161 1556 0.937743191 1.603865792 0.155642023 0.385964912 0.591439689 171 11 5 241 2L:3783538-3783704 7 102.5 432 FBgn0004893 346.31 11.79 17.92333333 0.295977592 8.693808312 5.718802306 1 1 1 0.2 dme-miR-7-5p 7mer-m8 GTCTTCC 2L 3784044 3784050 + 2L_3784044_3784050_+ 0.705836143 0.70551617 0.705676157 0.000226203 bowl FBtr0307029|FBtr0077490|FBtr0307027|FBtr0077492|FBtr0077491|FBtr0077493|FBtr0307028 3783283|3783283|3783283|3783283|3783283|3783283|3783283 3784121|3784121|3784121|3784121|3784121|3784121|3784121 2L + 3784018 3784101 3'utr bowl FlyBase G1620.1 ATATAAGCAACCCATAGAATTCCATGGTCTTCCTTCAATTTTAAATGATTTTATTCAAACCATAGCGAGTTAGTTGATTTCAAA 138 3784042 0.773076778 12 130 1064 0.947368421 1.364416975 0 0.195652174 0.350877193 138 3 6 162 2L:3784018-3784101 7 bowl FBtr0077491|FBtr0077493|FBtr0307028|FBtr0307029|FBtr0077490|FBtr0307027|FBtr0077492 3783283|3783283|3783283|3783283|3783283|3783283|3783283 3784121|3784121|3784121|3784121|3784121|3784121|3784121 GTCTTCC 7mer-m8 dme-miR-7-5p 2L + 3784016 3784103 3'utr bowl FlyBase G1286.1 TAATATAAGCAACCCATAGAATTCCATGGTCTTCCTTCAATTTTAAATGATTTTATTCAAACCATAGCGAGTTAGTTGATTTCAAATA 119 3784042 0.783192276 12 118 966 0.994444444 2.252853031 0.016666667 0.411764706 0.611111111 119 1 0 179 2L:3784016-3784103 7 119.5 433 FBgn0004893 346.31 11.79 17.92333333 0.345066559 10.13570823 6.667286591 2 2 2 0.2 dme-miR-283-5p 7mer-A1 GATATTA 2L 408978 408984 - 2L_408978_408984_- 0.776033084 0.750399751 0.763216417 0.01812548 AP-2alpha FBtr0089489|FBtr0089488 408874|408028 409387|409387 2L - 408959 409019 3'utr AP-2alpha FlyBase G6532.1 TATATTGTTGCATCATTTCGAGGCAGTAGCAATTGGATATTATATACCTATATACAGATCT 25 408987 0.832907339 7 21 188 0.892857143 1.397940009 0.214285714 0.12 0.214285714 25 3 0 25 2L:408959-409019 7 AP-2alpha FBtr0089488|FBtr0089489 408028|408874 409387|409387 GATATTA 7mer-A1 dme-miR-283-5p 2L - 408961 408999 3'utr AP-2alpha FlyBase G5105.1 AGGCAGTAGCAATTGGATATTATATACCTATATACAGAT 5 408979 0.996005565 2 2 31 0.461538462 0.77815125 0 0.8 0.923076923 5 7 0 6 2L:408961-408999 7 8.5 434 FBgn0264855 2009.92 51.58333333 79.16333333 0.004229024 0.164781906 0.107372942 3 -5 -1 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA 2L 417785 417792 + 2L_417785_417792_+ 0.605559545 0.607926075 0.60674281 0.001673439 ebi FBtr0078055 417633 418536 2L + 417764 417810 3'utr ebi FlyBase G752.1 TTTTACTTTTGATTCAAAAATTGCATTTAACTATATTTTTTAAAGAA 78 417784 0.876237012 2 76 713 0.989130435 1.658011397 0 0.153846154 0.282608696 78 0 1 91 2L:417764-417810 8 ebi FBtr0078055 417633 418536 TGCATTTA 8mer-A1 dme-miR-277-3p 2L + 417765 417813 3'utr ebi FlyBase G603.1 TTTACTTTTGATTCAAAAATTGCATTTAACTATATTTTTTAAAGAAGTG 50 417784 0.867074054 3 49 428 0.97260274 1.851258349 0.02739726 0.44 0.616438356 50 2 0 71 2L:417765-417813 8 63 435 FBgn0263933 724.51 26.33666667 40.32333333 0.086955322 2.392102266 1.562370836 1 1 1 0.2 dme-miR-317-5p 6mer2-7 TATCCC 2L 417893 417898 + 2L_417893_417898_+ 0.779735716 0.893890081 0.836812898 0.08071935 ebi FBtr0078055 417633 418536 2L + 417845 418008 3'utr ebi FlyBase G753.1 AGTCGATTTGGATCTGGAGTCCGGACCTTAGGTAACTCCTTTCTTAGCTATCCCGCCCTGCAATCGTATTTGTAATTGCTTTAAATTCTAATTAGTTCTTTAAGGTATACCTCTTGAGATGAGATCCTCCCGCTTTTGTCCACGTCTATTTCGTACGCTTAGTT 76 417895 0.823181114 19 74 560 0.977272727 1.934498451 0.068181818 0.131578947 0.25 76 2 0 86 2L:417845-418008 6 ebi FBtr0078055 417633 418536 TATCCC 6mer2-7 dme-miR-317-5p 2L + 417841 417912 3'utr ebi FlyBase G604.1 CATAAGTCGATTTGGATCTGGAGTCCGGACCTTAGGTAACTCCTTTCTTAGCTATCCCGCCCTGCAATCGTA 35 417895 0.773981067 12 34 234 1 1.681241237 0.145833333 0.371428571 0.541666667 35 0 0 48 2L:417841-417912 6 39 436 FBgn0263933 724.51 26.33666667 40.32333333 0.053829485 1.480825212 0.967181946 -2 -2 -2 0.2 dme-miR-283-5p 6mer3-8 TGATAT 2L 4345260 4345265 + 2L_4345260_4345265_+ 0.642756225 0.730160261 0.686458243 0.061804032 Atet FBtr0112898|FBtr0077426|FBtr0112899|FBtr0077427 4344479|4344479|4344479|4344479 4345776|4345411|4345776|4345411 2L + 4345233 4345272 3'utr Atet FlyBase G1645.1 ATCGGAGAAGGGAACCTGGCCAACTGGTGATATAAAGCAA 35 4345257 0.940023133 3 34 137 0.972222222 1.544068044 0.388888889 0.028571429 0.055555556 35 1 0 35 2L:4345233-4345272 6 Atet FBtr0112898|FBtr0077426|FBtr0112899|FBtr0077427 4344479|4344479|4344479|4344479 4345776|4345411|4345776|4345411 TGATAT 6mer3-8 dme-miR-283-5p 2L + 4345233 4345270 3'utr Atet FlyBase G1303.1 ATCGGAGAAGGGAACCTGGCCAACTGGTGATATAAAGC 17 4345257 0.774797544 4 17 62 1 1.431363764 0.037037037 0.470588235 0.666666667 17 0 0 27 2L:4345233-4345270 6 25 437 FBgn0020762 413.91 11.67333333 17.79666667 0.060399604 2.141633352 1.404757445 3 3 3 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 2L 4345324 4345330 + 2L_4345324_4345330_+ 0.516519348 0.515814321 0.516166835 0.00049851 Atet FBtr0112898|FBtr0077426|FBtr0112899|FBtr0077427 4344479|4344479|4344479|4344479 4345776|4345411|4345776|4345411 2L + 4345274 4345349 3'utr Atet FlyBase G1646.1 TACTATTTTTACGATGGGATGCAATCGGATTTGTGTTAGCTGCGCGTATTTGTGATTATTACATTTTAATTTAGTA 254 4345323 0.973262597 18 247 2579 0.973684211 1.86923172 0.006578947 0.177165354 0.3125 254 5 3 296 2L:4345274-4345349 7 Atet FBtr0112898|FBtr0077426|FBtr0112899|FBtr0077427 4344479|4344479|4344479|4344479 4345776|4345411|4345776|4345411 TGTGATT 7mer-m1 dme-miR-308-3p 2L + 4345271 4345348 3'utr Atet FlyBase G1304.1 AATTACTATTTTTACGATGGGATGCAATCGGATTTGTGTTAGCTGCGCGTATTTGTGATTATTACATTTTAATTTAGT 164 4345323 0.796964753 19 152 1701 0.926829268 1.316542162 0.040650407 0.353658537 0.569105691 164 8 10 228 2L:4345271-4345348 7 196 438 FBgn0020762 413.91 11.67333333 17.79666667 0.473532894 16.79040548 11.01329837 1 1 1 0.2 dme-miR-980-3p 6mer3-8 GGCAGC 2L 4345435 4345440 + 2L_4345435_4345440_+ 0.988572428 0.988495063 0.988533745 5.47E-05 Atet FBtr0112898|FBtr0112899 4344479|4344479 4345776|4345776 2L + 4345413 4345453 3'utr Atet FlyBase G1647.1 AACAGCACGCTCTCCTTCCTTCGGCAGCCACACCCAAAGTA 15 4345433 0.960407463 2 15 75 1 1.278753601 0.105263158 0.2 0.368421053 15 0 0 19 2L:4345413-4345453 6 Atet FBtr0112898|FBtr0112899 4344479|4344479 4345776|4345776 GGCAGC 6mer3-8 dme-miR-980-3p 2L + 4345416 4345453 3'utr Atet FlyBase G1306.1 AGCACGCTCTCCTTCCTTCGGCAGCCACACCCAAAGTA 7 4345433 0.904276849 2 6 31 0.833333333 1 0 0.571428571 0.75 7 2 0 10 2L:4345416-4345453 6 11 439 FBgn0020762 413.91 11.67333333 17.79666667 0.026575826 0.942318675 0.618093276 2 2 2 0.2 dme-miR-277-3p 6mer2-7 GCATTT 2L 4399866 4399871 + 2L_4399866_4399871_+ 0.999997046 0.99978778 0.999892413 0.000147927 l(2)k05819 FBtr0331447|FBtr0305968|FBtr0077432 4399732|4399732|4399732 4400487|4400105|4400105 2L + 4399852 4399882 3'utr l(2)k05819 FlyBase G1665.1 AGTTGTTTCTGTCAGCATTTGTTCTTAGGTG 5 4399871 0.717877533 4 5 50 1 0.698970004 0.2 0 0 5 0 0 5 2L:4399852-4399882 6 l(2)k05819 FBtr0305968|FBtr0331447|FBtr0077432 4399732|4399732|4399732 4400105|4400487|4400105 GCATTT 6mer2-7 dme-miR-277-3p 2L + 4399831 4399877 3'utr l(2)k05819 FlyBase G1323.1 AGTCTGGGTATCCTTAGACGAAGTTGTTTCTGTCAGCATTTGTTCTT 5 4399862 0.991013988 4 5 53 1 0.903089987 0.125 0.4 0.625 5 0 0 8 2L:4399831-4399877 6 4.5 440 FBgn0022153 937.2133333 22.65666667 34.38 0.004801468 0.198617037 0.130890052 -5 4 -0.5 0.2 dme-miR-184-5p 6mer3-8 TGATAA 2L 4446696 4446701 - 2L_4446696_4446701_- 0.730160982 0.756384329 0.743272656 0.018542673 MFS18 FBtr0077456 4446668 4446987 2L - 4446687 4446752 3'utr MFS18 FlyBase G7461.1 TATATATTTAAGAGAGTAGTTTTAAGTAGCGAAATCTTACTGCTCCTAGCGTGATAAAATACAAAT 36 4446707 0.982377547 8 32 242 0.897959184 1.342422681 0.163265306 0.25 0.448979592 36 4 1 44 2L:4446687-4446752 6 MFS18 FBtr0077456 4446668 4446987 TGATAA 6mer3-8 dme-miR-184-5p 2L - 4446677 4446743 3'utr MFS18 FlyBase G5821.1 AAGAGAGTAGTTTTAAGTAGCGAAATCTTACTGCTCCTAGCGTGATAAAATACAAATATTTAATCCT 24 4446706 0.818101911 7 21 169 0.875 0.970036777 0.21875 0.291666667 0.46875 24 2 2 28 2L:4446677-4446743 6 24.5 441 FBgn0025684 397.49 26.06 39.8 0.061636771 0.940138143 0.615577889 6 5 5.5 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 2L 4461630 4461635 + 2L_4461630_4461635_+ 0.994601693 0.998456042 0.996528867 0.002725402 CG15435 FBtr0077441|FBtr0345632 4461558|4461558 4461746|4461746 2L + 4461612 4461645 3'utr CG15435 FlyBase G1682.1 TGTTGACCACTTTGCATCTGTGTTTTTGTCGTAT 13 4461628 0.793264365 3 11 146 0.882352941 1.176091259 0.294117647 0.307692308 0.470588235 13 2 0 15 2L:4461612-4461645 6 CG15435 FBtr0345632|FBtr0077441 4461558|4461558 4461746|4461746 TGTGTT 6mer3-8 dme-miR-317-3p 2L + 4461611 4461648 3'utr CG15435 FlyBase G1333.1 ATGTTGACCACTTTGCATCTGTGTTTTTGTCGTATTGT 9 4461628 0.753238236 4 8 95 0.923076923 1.079181246 0.153846154 0.333333333 0.538461538 9 1 0 12 2L:4461611-4461648 6 10 442 FBgn0031608 120.9866667 8.103333333 12.34333333 0.082653736 1.234060058 0.810153929 2 2 2 0.2 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 447725 447732 + 2L_447725_447732_+ 0.489267679 0.630325727 0.559796703 0.099743068 ex FBtr0329832|FBtr0078059 447248|447248 448701|448701 2L + 447696 447761 3'utr ex FlyBase G791.1 AAATACACATTCAAATAATCAGAACCCAGTCTAGTCACTTAAGGGAATTGGTAACGTAACCACAGC 33 447734 0.657979396 9 31 162 0.906976744 0.892094603 0.046511628 0.181818182 0.372093023 33 0 4 39 2L:447696-447761 8 ex FBtr0329832|FBtr0078059 447248|447248 448701|448701 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L + 447691 447744 3'utr ex FlyBase G632.1 CCTCAAAATACACATTCAAATAATCAGAACCCAGTCTAGTCACTTAAGGGAATT 31 447725 0.959012801 6 29 140 0.95 1.278753601 0.025 0.258064516 0.425 31 1 1 38 2L:447691-447744 8 29 443 FBgn0004583 1742.906667 31.79333333 48.95666667 0.016638871 0.91214091 0.592360591 -9 0 -4.5 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 2L 4478340 4478346 - 2L_4478340_4478346_- 0.474809804 0.450487528 0.462648666 0.017198463 dp FBtr0332354|FBtr0332350|FBtr0332348|FBtr0332349|FBtr0332352|FBtr0332345|FBtr0305142|FBtr0332351 4477460|4477460|4477460|4477460|4477460|4477460|4477460|4477460 4479537|4479537|4479537|4479537|4479537|4479537|4479537|4479537 2L - 4478307 4478383 3'utr dp FlyBase G7507.1 ATTTTTGTAGTTTTATAGTCAATTAATATTAAATTGTTGTGATTGTTTTTAATGCAAAAGAGATACTTCCACTAACT 30 4478340 0.992832346 8 29 344 0.973684211 1.568201724 0.184210526 0.2 0.368421053 30 1 0 37 2L:4478307-4478383 7 dp FBtr0332348|FBtr0332352|FBtr0305142|FBtr0332351|FBtr0332349|FBtr0332354|FBtr0332345|FBtr0332350 4477460|4477460|4477460|4477460|4477460|4477460|4477460|4477460 4479537|4479537|4479537|4479537|4479537|4479537|4479537|4479537 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 4478320 4478375 3'utr dp FlyBase G5850.1 AGTTTTATAGTCAATTAATATTAAATTGTTGTGATTGTTTTTAATGCAAAAGAGAT 25 4478340 0.883336653 8 25 286 1 1.544068044 0.114285714 0.32 0.514285714 25 0 0 35 2L:4478320-4478375 7 23.5 444 FBgn0053196 31 0.07 0.11 0.758064516 335.7142857 213.6363636 -6 -6 -6 0.2 dme-miR-34-5p 7mer-A1 ACTGCCA 2L 4478549 4478555 - 2L_4478549_4478555_- 0.820043184 0.823323818 0.821683501 0.002319735 dp FBtr0332354|FBtr0332350|FBtr0332348|FBtr0332349|FBtr0332352|FBtr0332345|FBtr0305142|FBtr0332351 4477460|4477460|4477460|4477460|4477460|4477460|4477460|4477460 4479537|4479537|4479537|4479537|4479537|4479537|4479537|4479537 2L - 4478534 4478579 3'utr dp FlyBase G7509.1 AATCGTTGAGGGAACATAACTATAACTGCCACTGAGGCGTCATCAG 7 4478557 0.96277779 4 7 37 1 0.954242509 0.222222222 0.285714286 0.444444444 7 0 0 9 2L:4478534-4478579 7 dp FBtr0332348|FBtr0332352|FBtr0305142|FBtr0332351|FBtr0332349|FBtr0332354|FBtr0332345|FBtr0332350 4477460|4477460|4477460|4477460|4477460|4477460|4477460|4477460 4479537|4479537|4479537|4479537|4479537|4479537|4479537|4479537 ACTGCCA 7mer-A1 dme-miR-34-5p 2L - 4478528 4478572 3'utr dp FlyBase G5852.1 GAGGGAACATAACTATAACTGCCACTGAGGCGTCATCAGCGCACA 12 4478557 0.71301643 2 10 55 0.928571429 1.113943352 0.642857143 0.166666667 0.285714286 12 1 0 13 2L:4478528-4478572 7 9 445 FBgn0053196 31 0.07 0.11 0.290322581 128.5714286 81.81818182 2 2 2 0.2 dme-miR-968-5p 7mer-m8 ACTACTT 2L 447935 447941 + 2L_447935_447941_+ 0.591917842 0.591357814 0.591637828 0.00039598 ex FBtr0329832|FBtr0078059 447248|447248 448701|448701 2L + 447898 447979 3'utr ex FlyBase G792.2 TACTTAGTTAGGCCAGAAATGCGAATACTTAAAACTAACTACTTCCGCCCAAACAACTGTGATTGATTTTTATTTAAACTTA 2898 447940 0.9175729 20 2867 12252 0.990640953 2.543198586 0.033465683 0.178743961 0.32501418 2898 24 9 3493 2L:447898-447979 7 ex FBtr0329832|FBtr0078059 447248|447248 448701|448701 ACTACTT 7mer-m8 dme-miR-968-5p 2L + 447895 447978 3'utr ex FlyBase G634.1 AAATACTTAGTTAGGCCAGAAATGCGAATACTTAAAACTAACTACTTCCGCCCAAACAACTGTGATTGATTTTTATTTAAACTT 1793 447940 0.847468128 16 1743 7292 0.97739066 2.46686762 0.026315789 0.357501394 0.57301705 1793 53 8 2637 2L:447895-447978 7 2137 446 FBgn0004583 1742.906667 31.79333333 48.95666667 1.226112701 67.21534913 43.65084769 -5 -5 -5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 448867 448873 - 2L_448867_448873_- 0.737317104 0.741941164 0.739629134 0.003269732 crq FBtr0078087|FBtr0078087|FBtr0078087|FBtr0331233|FBtr0331233|FBtr0331233 448252|448252|448252|448252|448252|448252 449020|449020|449020|449020|449020|449020 2L - 448816 449139 stop_codon crq FlyBase G6564.1 TATTCGGCTATTCCATGATAGCTTTTGCCAGTGTCTTTCTCATCACCGGCATCACGCTGACTGTGACGAAAAAGTGGGTGCGGCGAACTCCCGAGGATGAGGACATACTTACCAACTAGAGCAAAATAGTTTTTAAGCTTTGCCAAAGTGCCAGGAATTGTTAACTCTCCTAGTTCATTCTGATAGTCGCCCGTCAAATGCTGTTCTTTGTCAGTTATGCGTTATGTAATATGTAAGTGATACGAATCGACGTTCGTCTTGCAGTTTGTGATAGCAAAACCTACTCTAAAAAAAAAACTAAAAACTACTCTAACTCTAAAAAAA 807 448874 0.937649723 54 760 6212 0.944265809 1.564764667 0.175777063 0.133828996 0.250803859 807 29 23 881 2L:448816-449139 7 crq FBtr0331232|FBtr0331232|FBtr0331232|FBtr0078088|FBtr0078088|FBtr0078088|FBtr0078087|FBtr0078087|FBtr0078087|FBtr0331233|FBtr0331233|FBtr0331233|FBtr0304741|FBtr0304741|FBtr0304741 448714|448714|448714|448714|448714|448714|448252|448252|448252|448252|448252|448252|448714|448714|448714 449020|449020|449020|449020|449020|449020|449020|449020|449020|449020|449020|449020|449020|449020|449020 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 448819 449017 3'utr crq FlyBase G5128.1 AAAATAGTTTTTAAGCTTTGCCAAAGTGCCAGGAATTGTTAACTCTCCTAGTTCATTCTGATAGTCGCCCGTCAAATGCTGTTCTTTGTCAGTTATGCGTTATGTAATATGTAAGTGATACGAATCGACGTTCGTCTTGCAGTTTGTGATAGCAAAACCTACTCTAAAAAAAAAACTAAAAACTACTCTAACTCTAAAA 473 448874 0.938145021 44 452 3729 0.952574526 1.700827289 0.185636856 0.412262156 0.623306233 473 22 13 703 2L:448819-449017 7 372.5 447 FBgn0015924 1407.533333 61.27666667 93.41333333 0.264647374 6.07898602 3.98765344 1 1 1 0.2 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 458977 458984 - 2L_458977_458984_- 0.596931674 0.404188707 0.50056019 0.136289882 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 458932 459036 3'utr CG4297 FlyBase G6576.1 ACATATATGTCTGTAACTCTATACTTTTAAATCGGAGGTTTTCACTGTACCTTAGCTTTAAGATTTGTGACTTTATCAATGTGAGTGTCTTTGAGCAAACAAAAC 32 458985 0.990795798 16 31 320 0.972972973 1.556302501 0.162162162 0.15625 0.27027027 32 1 0 36 2L:458932-459036 8 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 458940 459008 3'utr CG4297 FlyBase G5137.1 AAATCGGAGGTTTTCACTGTACCTTAGCTTTAAGATTTGTGACTTTATCAATGTGAGTGTCTTTGAGCA 16 458985 0.950431636 8 13 145 0.857142857 1.255272505 0.142857143 0.3125 0.476190476 16 3 0 18 2L:458940-459008 8 17.5 448 FBgn0031258 226.3333333 3.93 5.996666667 0.077319588 4.452926209 2.918287938 1 1 1 0.2 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 459178 459185 - 2L_459178_459185_- 0.620451181 0.620509927 0.620480554 4.15E-05 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 459149 459233 3'utr CG4297 FlyBase G6578.1 AGCTTCTAAATGTATGTTCATTCGTTGGTAACTTTTACGACTAAGTAATACGCTTAATTTTAGTACAAACAAAATACAAAGTGCA 32 459185 0.98377861 10 32 245 1 1.579783597 0.105263158 0.1875 0.315789474 32 0 0 38 2L:459149-459233 8 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 TACGCTTA 8mer-A1 dme-miR-965-3p 2L - 459158 459234 3'utr CG4297 FlyBase G5138.1 AAGCTTCTAAATGTATGTTCATTCGTTGGTAACTTTTACGACTAAGTAATACGCTTAATTTTAGTACAAACAAAATA 17 459185 0.964547922 6 16 130 0.875 1.322219295 0.083333333 0.294117647 0.5 17 3 0 21 2L:459158-459234 8 19.5 449 FBgn0031258 226.3333333 3.93 5.996666667 0.086156112 4.961832061 3.251806559 0 0 0 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 2L 459276 459281 - 2L_459276_459281_- 0.578776625 0.571946294 0.57536146 0.004829751 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 459257 459300 3'utr CG4297 FlyBase G6579.1 CTTTTTCTCGTAACACATTCCAAAGGACCAAACATTTTGAAACT 42 459283 0.716370799 3 42 112 1 1.73239376 0.185185185 0.261904762 0.425925926 42 0 0 54 2L:459257-459300 6 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 459253 459294 3'utr CG4297 FlyBase G5139.1 CTCGTAACACATTCCAAAGGACCAAACATTTTGAAACTAATA 35 459283 0.883890613 2 34 93 1 1.72427587 0.037735849 0.441176471 0.641509434 34 0 0 53 2L:459253-459294 6 37 450 FBgn0031258 226.3333333 3.93 5.996666667 0.1634757 9.41475827 6.170094497 2 2 2 0.2 dme-bantam-3p 6mer3-8 TGATCT 2L 459745 459750 - 2L_459745_459750_- 0.830094904 0.859636739 0.844865822 0.020889207 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 459668 459767 3'utr CG4297 FlyBase G6582.1 CATCTGTTGCAATTGTTTGATCTGTTAGTAGCCGAAGACTTTGTTTTAGTGCAATTATTTGTTAGGTTCCTAGAGCAATTTGTTGTGTTTATTTTAAGAT 44 459726 0.770975045 15 43 409 0.979166667 1.672097858 0.104166667 0.090909091 0.166666667 44 1 0 47 2L:459668-459767 6 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 TGATCT 6mer3-8 dme-bantam-3p 2L - 459684 459768 3'utr CG4297 FlyBase G5141.1 ACATCTGTTGCAATTGTTTGATCTGTTAGTAGCCGAAGACTTTGTTTTAGTGCAATTATTTGTTAGGTTCCTAGAGCAATTTGTT 47 459726 0.989408011 12 44 424 0.947368421 1.857332496 0.157894737 0.468085106 0.671052632 47 4 0 72 2L:459684-459768 6 25 451 FBgn0031258 226.3333333 3.93 5.996666667 0.110456554 6.361323155 4.168982768 -24 -24 -24 0.2 dme-miR-14-3p 6mer3-8 AAGACT 2L 460327 460332 - 2L_460327_460332_- 0.86807506 0.902130085 0.885102573 0.024080521 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 460261 460425 3'utr CG4297 FlyBase G6585.1 ATAAAAGAAACACCACACGTACACTTTAGATACACCACAAAACAAGAAAACTAAAGATATGGATGCAAAAGCAGCTACACTTTACAGAATCTCAAGACTTTTTTTAACATTTGGATTTATTTAAGGAAACGAAATGTAGCGTAATATAGTCATTTTAGGAAAATC 251 460325 0.984723099 25 243 1953 0.974842767 1.889301703 0.034591195 0.219123506 0.383647799 251 5 3 310 2L:460261-460425 6 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 AAGACT 6mer3-8 dme-miR-14-3p 2L - 460273 460382 3'utr CG4297 FlyBase G5146.1 AAGAAAACTAAAGATATGGATGCAAAAGCAGCTACACTTTACAGAATCTCAAGACTTTTTTTAACATTTGGATTTATTTAAGGAAACGAAATGTAGCGTAATATAGTCAT 155 460325 0.987101545 20 150 1308 0.976851852 2.02325246 0.009259259 0.316129032 0.509259259 155 4 1 211 2L:460273-460382 6 172.5 452 FBgn0031258 226.3333333 3.93 5.996666667 0.762150221 43.89312977 28.7659811 -7 -7 -7 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 2L 460494 460501 - 2L_460494_460501_- 0.62868256 0.637896433 0.633289496 0.00651514 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 460451 460525 stop_codon CG4297 FlyBase G6586.1 AAGTCAAATAGGATTGCAGCTTCTACCAAAGATATTTCTGGTCCCTGGACAGGATCAGATGTGTTCGGCTCGTCG 32 460502 0.821810637 9 26 229 0.8 1.146128036 0.085714286 0.0625 0.142857143 32 6 1 28 2L:460451-460525 8 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 460450 460516 stop_codon CG4297 FlyBase G5147.1 AGGATTGCAGCTTCTACCAAAGATATTTCTGGTCCCTGGACAGGATCAGATGTGTTCGGCTCGTCGA 19 460502 0.849296098 7 18 141 0.961538462 1.397940009 0.153846154 0.315789474 0.5 19 1 0 25 2L:460450-460516 8 14.5 453 FBgn0031258 226.3333333 3.93 5.996666667 0.064064801 3.68956743 2.418010006 1 1 1 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2L 4841642 4841648 - 2L_4841642_4841648_- 0.646744629 0.579744312 0.61324447 0.047376366 mxt FBtr0077410|FBtr0332479 4841480|4841480 4842233|4842233 2L - 4841619 4841679 3'utr mxt FlyBase G7575.1 TTTTCAAGATTTGAAATTGTATTTTGTTTTCTCTAGTCTATGCATCATAGAAATTTGTATA 26 4841640 0.993160799 6 24 288 0.931034483 1.431363764 0.137931034 0.115384615 0.206896552 26 2 0 27 2L:4841619-4841679 7 mxt FBtr0332479|FBtr0077410 4841480|4841480 4842233|4842233 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2L - 4841629 4841658 3'utr mxt FlyBase G5894.1 TTTTGTTTTCTCTAGTCTATGCATCATAGA 18 4841640 0.826571868 3 18 178 1 1.361727836 0.217391304 0.277777778 0.434782609 18 0 0 23 2L:4841629-4841658 7 20.5 454 FBgn0031637 825.01 33.64666667 51.55333333 0.024848184 0.609272835 0.39764645 -8 -8 -8 0.2 dme-miR-980-3p 7mer-A1 GCAGCTA 2L 4841919 4841925 - 2L_4841919_4841925_- 0.799393412 0.786013445 0.792703429 0.009461089 mxt FBtr0077410|FBtr0332479 4841480|4841480 4842233|4842233 2L - 4841907 4841940 3'utr mxt FlyBase G7576.1 ACTAATTCAAAAAATGCAGCTAAATGAAAAGCCT 10 4841926 0.935437701 2 7 37 0.818181818 0.954242509 0 0.1 0.181818182 10 2 0 9 2L:4841907-4841940 7 mxt FBtr0332479|FBtr0077410 4841480|4841480 4842233|4842233 GCAGCTA 7mer-A1 dme-miR-980-3p 2L - 4841889 4841937 3'utr mxt FlyBase G5895.1 AATTCAAAAAATGCAGCTAAATGAAAAGCCTCGAAGCGGCCCTAACTTG 16 4841926 0.951671458 3 12 53 0.708333333 1.230448921 0.041666667 0.4375 0.625 16 7 0 17 2L:4841889-4841937 7 10.5 455 FBgn0031637 825.01 33.64666667 51.55333333 0.012727118 0.312066574 0.203672572 1 1 1 0.2 dme-miR-999-3p 6mer3-8 AGTTAA 2L 4841980 4841985 - 2L_4841980_4841985_- 0.935436555 0.942557725 0.93899714 0.005035378 mxt FBtr0077410|FBtr0332479 4841480|4841480 4842233|4842233 2L - 4841976 4842010 3'utr mxt FlyBase G7577.1 AACTAGAAAATTCAACGAAGCTCTTAGTTAAGTTC 26 4841987 0.732248944 2 25 168 1 1.477121255 0 0.153846154 0.266666667 26 0 0 30 2L:4841976-4842010 6 mxt FBtr0332479|FBtr0077410 4841480|4841480 4842233|4842233 AGTTAA 6mer3-8 dme-miR-999-3p 2L - 4841976 4842010 3'utr mxt FlyBase G5896.1 AACTAGAAAATTCAACGAAGCTCTTAGTTAAGTTC 12 4841987 0.712871479 3 11 82 0.941176471 1.204119983 0 0.25 0.470588235 12 1 0 16 2L:4841976-4842010 6 18.5 456 FBgn0031637 825.01 33.64666667 51.55333333 0.022423971 0.549831583 0.358851675 2 2 2 0.2 dme-miR-33-5p 6mer3-8 CAATGC 2L 4842144 4842149 - 2L_4842144_4842149_- 0.660383993 0.993059629 0.826721811 0.235237173 mxt FBtr0077410|FBtr0332477|FBtr0332479|FBtr0077409|FBtr0332478|FBtr0077411 4841480|4842088|4841480|4842088|4842088|4842088 4842233|4842233|4842233|4842233|4842233|4842233 2L - 4842123 4842154 3'utr mxt FlyBase G7578.1 TGCTTCAATGCTTTTGGCCATGGCCACATCTA 6 4842140 0.93276304 3 6 44 1 0.903089987 0.25 0.166666667 0.375 6 0 0 8 2L:4842123-4842154 6 mxt FBtr0332478|FBtr0077411|FBtr0077409|FBtr0332477|FBtr0332479|FBtr0077410 4842088|4842088|4842088|4842088|4841480|4841480 4842233|4842233|4842233|4842233|4842233|4842233 CAATGC 6mer3-8 dme-miR-33-5p 2L - 4842121 4842167 3'utr mxt FlyBase G5897.1 CGGAGCTGCAGTATGCTTCAATGCTTTTGGCCATGGCCACATCTAAC 7 4842141 0.985224607 6 7 52 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 2L:4842121-4842167 6 6.5 457 FBgn0031637 825.01 33.64666667 51.55333333 0.007878692 0.19318407 0.126083021 -9 -8 -8.5 0.2 dme-miR-8-3p 7mer-m8 CAGTATT 2L 4842961 4842967 - 2L_4842961_4842967_- 0.661605754 0.654315753 0.657960753 0.005154808 mxt FBtr0300941 4842582 4843059 2L - 4842915 4843031 3'utr mxt FlyBase G7582.1 AATTTTACGTAGCCGGAATACGTATTATTGAATCTCAGTCACAGATAGGCTTTTCTTTTCATGTCAGTATTTTTGCTGTTTTAATTTTATATAACTTATCATTAAGAAAAGGTGAAG 99 4842970 0.990269486 14 95 956 0.964912281 1.740362689 0.061403509 0.131313131 0.245614035 99 3 1 110 2L:4842915-4843031 7 mxt FBtr0300941 4842582 4843059 CAGTATT 7mer-m8 dme-miR-8-3p 2L - 4842943 4843032 3'utr mxt FlyBase G5899.2 TAATTTTACGTAGCCGGAATACGTATTATTGAATCTCAGTCACAGATAGGCTTTTCTTTTCATGTCAGTATTTTTGCTGTTTTAATTTTA 87 4842979 0.722695713 18 83 801 0.960629921 2.086359831 0.086614173 0.310344828 0.527559055 87 5 0 122 2L:4842943-4843032 7 27 458 FBgn0031637 825.01 33.64666667 51.55333333 0.032726876 0.802456905 0.523729471 3 12 7.5 0.2 dme-miR-318-3p 7mer-A1 CCAGTGA 2L 4903164 4903170 + 2L_4903164_4903170_+ 0.810121057 0.820210849 0.815165953 0.007134495 CG3036 FBtr0077391|FBtr0336832 4903152|4903152 4903889|4903458 2L + 4903132 4903197 stop_codon CG3036 FlyBase G1738.1 GCCCCTCAAGAACGAGAAGTGATTGCACATCGCCAGTGAGACTCATTCGGTGCCACTGCTGTTCGT 43 4903168 0.967037442 4 43 236 1 1.707570176 0.137254902 0.186046512 0.31372549 43 0 0 51 2L:4903132-4903197 7 CG3036 FBtr0077391|FBtr0336832 4903152|4903152 4903889|4903458 CCAGTGA 7mer-A1 dme-miR-318-3p 2L + 4903139 4903211 stop_codon CG3036 FlyBase G1374.1 AAGAACGAGAAGTGATTGCACATCGCCAGTGAGACTCATTCGGTGCCACTGCTGTTCGTGATGAGCGGAAGGA 26 4903168 0.97092299 6 25 147 0.974358974 1.579783597 0.128205128 0.384615385 0.58974359 26 1 0 38 2L:4903139-4903211 7 32 459 FBgn0031645 281.25 12.45666667 19.09 0.113777778 2.568905539 1.676270299 -4 -4 -4 0.2 dme-miR-304-5p 8mer-A1 TGAGATTA 2L 4903289 4903296 + 2L_4903289_4903296_+ 0.596784445 0.608338302 0.602561373 0.008169841 CG3036 FBtr0077391|FBtr0336832 4903152|4903152 4903889|4903458 2L + 4903266 4903313 3'utr CG3036 FlyBase G1739.1 TAAAGTAGTTGTTACTCCCACATTGAGATTACGGGGCTTTCATTTGGC 65 4903288 0.879752084 2 64 520 0.95890411 1.84509804 0.082191781 0.092307692 0.191780822 65 3 0 70 2L:4903266-4903313 8 CG3036 FBtr0077391|FBtr0336832 4903152|4903152 4903889|4903458 TGAGATTA 8mer-A1 dme-miR-304-5p 2L + 4903269 4903311 3'utr CG3036 FlyBase G1375.1 AGTAGTTGTTACTCCCACATTGAGATTACGGGGCTTTCATTTG 32 4903288 0.847297904 4 32 230 1 1.707570176 0.137254902 0.46875 0.666666667 32 0 0 51 2L:4903269-4903311 8 48 460 FBgn0031645 281.25 12.45666667 19.09 0.170666667 3.853358309 2.514405448 1 1 1 0.2 dme-miR-965-3p 6mer2-7 ACGCTT 2L 4947905 4947910 + 2L_4947905_4947910_+ 0.996757188 0.999240477 0.997998832 0.001755958 betaggt-I FBtr0330714|FBtr0078991 4947866|4947832 4948324|4948324 2L + 4947847 4947930 stop_codon betaggt-I FlyBase G1751.1 AAAGCACGAGGGGAAAGTTAAAGCACACTATTGTATTTATATTGGCCACATTTTAGCCACGCTTTTTATGCCCTTGCAGTTAGT 43 4947911 0.991726943 11 35 385 0.829787234 1.290034611 0.212765957 0.093023256 0.170212766 43 7 1 39 2L:4947847-4947930 6 betaggt-I FBtr0078991|FBtr0330714 4947832|4947866 4948324|4948324 ACGCTT 6mer2-7 dme-miR-965-3p 2L + 4947842 4947930 stop_codon betaggt-I FlyBase G1380.1 CGCACAAAGCACGAGGGGAAAGTTAAAGCACACTATTGTATTTATATTGGCCACATTTTAGCCACGCTTTTTATGCCCTTGCAGTTAGT 23 4947912 0.989239742 11 20 195 0.875 1.06694679 0.375 0.47826087 0.7 23 3 2 35 2L:4947842-4947930 6 16 461 FBgn0015000 534.58 37.06666667 56.91333333 0.029930039 0.431654676 0.281129202 -6 -7 -6.5 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 2L 4975378 4975384 - 2L_4975378_4975384_- 0.509022439 0.469263719 0.489143079 0.028113646 Gmd FBtr0079049 4975298 4975578 2L - 4975371 4975400 3'utr Gmd FlyBase G7634.1 ACGTTCATGTTCAGTGTGTGATTCTACTTG 8 4975385 0.720897976 4 8 71 1 1.041392685 0.181818182 0.25 0.454545455 8 0 0 11 2L:4975371-4975400 7 Gmd FBtr0079049 4975298 4975578 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 4975358 4975394 3'utr Gmd FlyBase G5933.1 ATGTTCAGTGTGTGATTCTACTTGTTTTTATACAGTA 6 4975386 0.985209722 4 6 49 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 2L:4975358-4975394 7 7 462 FBgn0031661 247.5733333 19.21 29.15 0.028274451 0.364393545 0.240137221 1 2 1.5 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 2L 4992149 4992155 + 2L_4992149_4992155_+ 0.500327647 0.502451664 0.501389655 0.001501966 CG34126 FBtr0329975|FBtr0329977|FBtr0329976|FBtr0329974|FBtr0290010 4991661|4991610|4991597|4991610|4991610 4992702|4992435|4992435|4992702|4992435 2L + 4992115 4992224 3'utr CG34126 FlyBase G1812.1 ACCAATTCCACTAAGATTGGATAGGACATATTGTTGTGATTCATGATCATATCAAAACTGAATTCTAGAAGCTCTATGCATTGCTGTTGTAATCGTGTGCTAACCAAATA 29 4992147 0.986850387 16 26 224 0.911764706 1.491361694 0.147058824 0.172413793 0.294117647 29 3 0 31 2L:4992115-4992224 7 CG34126 FBtr0329974|FBtr0329976|FBtr0329977|FBtr0329975|FBtr0290010 4991610|4991597|4991610|4991661|4991610 4992702|4992435|4992435|4992702|4992435 TGTGATT 7mer-m1 dme-miR-308-3p 2L + 4992111 4992230 3'utr CG34126 FlyBase G1425.1 TAAAACCAATTCCACTAAGATTGGATAGGACATATTGTTGTGATTCATGATCATATCAAAACTGAATTCTAGAAGCTCTATGCATTGCTGTTGTAATCGTGTGCTAACCAAATATTTGGC 36 4992148 0.775562654 19 33 286 0.862745098 1.342422681 0.176470588 0.333333333 0.529411765 36 6 1 44 2L:4992111-4992230 7 14 463 FBgn0083962 1546.97 31.44666667 48.27666667 0.009049949 0.445198219 0.289995167 2 1 1.5 0.2 dme-miR-79-3p 6mer2-7 AGCTTT 2L 4993806 4993811 - 2L_4993806_4993811_- 0.835771726 0.982030929 0.908901328 0.103420872 Rtnl1 FBtr0079039|FBtr0079043|FBtr0079040|FBtr0079038|FBtr0079044|FBtr0079042|FBtr0332413|FBtr0301539|FBtr0301540 4993639|4993639|4993639|4993639|4992806|4993639|4993639|4993639|4992806 4994207|4994207|4994207|4994207|4994207|4994207|4994207|4994207|4994207 2L - 4993773 4993820 3'utr Rtnl1 FlyBase G7654.1 GATTTATTCAGCTTTCTTAGTTTTCATGTGACCCTTTTTAAATTAATT 7 4993813 0.995863691 6 6 81 0.857142857 0.77815125 0.285714286 0 0 7 1 0 6 2L:4993773-4993820 6 Rtnl1 FBtr0301540|FBtr0301539|FBtr0332413|FBtr0079042|FBtr0079044|FBtr0079038|FBtr0079040|FBtr0079043|FBtr0079039 4992806|4993639|4993639|4993639|4992806|4993639|4993639|4993639|4993639 4994207|4994207|4994207|4994207|4994207|4994207|4994207|4994207|4994207 AGCTTT 6mer2-7 dme-miR-79-3p 2L - 4993773 4993822 3'utr Rtnl1 FlyBase G5948.1 TCGATTTATTCAGCTTTCTTAGTTTTCATGTGACCCTTTTTAAATTAATT 10 4993813 0.9938489 7 10 115 1 1.176091259 0.266666667 0.3 0.533333333 10 0 0 15 2L:4993773-4993822 6 6.5 464 FBgn0053113 2720.043333 137.31 210.0133333 0.002389668 0.04733814 0.030950416 2 2 2 0.2 dme-miR-282-5p 6mer2-7 GAGGCT 2L 5010334 5010339 - 2L_5010334_5010339_- 0.967295805 0.970426077 0.968860941 0.002213456 Tfb5 FBtr0301130 5009929 5010486 2L - 5010315 5010362 3'utr Tfb5 FlyBase G7669.1 AGCGGCGTGCCCGCAAAGCCTTGGAGGCTCTGGAGCAGGACAACTACC 6 5010341 0.931640874 2 6 21 1 0.77815125 0.333333333 0 0 6 0 0 6 2L:5010315-5010362 6 Tfb5 FBtr0301130 5009929 5010486 GAGGCT 6mer2-7 dme-miR-282-5p 2L - 5010322 5010362 3'utr Tfb5 FlyBase G5954.1 AGCGGCGTGCCCGCAAAGCCTTGGAGGCTCTGGAGCAGGAC 5 5010341 0.747334656 2 5 14 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 2L:5010322-5010362 6 5 465 FBgn0265968 206.6566667 30.92333333 47.31 0.024194719 0.161690202 0.105685902 2 2 2 0.2 dme-miR-277-3p 7mer-m8 TGCATTT 2L 5047718 5047724 + 2L_5047718_5047724_+ 0.451953696 0.508871146 0.480412421 0.04024668 CG44000 FBtr0334121|FBtr0334123|FBtr0334120|FBtr0334119|FBtr0334122 5046974|5046974|5046974|5046974|5046974 5048365|5048365|5048365|5048365|5048365 2L + 5047682 5047744 3'utr CG44000 FlyBase G1844.1 AACACTTAAGCTGGTCAAGGATAAAAAGGACAAAATTGCATTTGAGTACATCATGGAGAACGC 75 5047717 0.915481584 4 69 384 0.917525773 1.648360011 0.288659794 0.173333333 0.360824742 75 7 1 89 2L:5047682-5047744 7 CG44000 FBtr0334121|FBtr0334122|FBtr0334119|FBtr0334120|FBtr0334123 5046974|5046974|5046974|5046974|5046974 5048365|5048365|5048365|5048365|5048365 TGCATTT 7mer-m8 dme-miR-277-3p 2L + 5047686 5047744 3'utr CG44000 FlyBase G1463.1 CTTAAGCTGGTCAAGGATAAAAAGGACAAAATTGCATTTGAGTACATCATGGAGAACGC 54 5047717 0.962872234 5 54 275 1 1.913813852 0.243902439 0.351851852 0.573170732 54 0 0 82 2L:5047686-5047744 7 61 466 FBgn0264742 443.39 23.51666667 36.15 0.1375764 2.593905032 1.687413555 1 1 1 0.2 dme-miR-92b-3p 8mer-m1 GTGCAATT 2L 5072544 5072551 - 2L_5072544_5072551_- 0.594124908 0.549083849 0.571604378 0.031848867 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 2L - 5072517 5072647 3'utr pgant5 FlyBase G7737.1 ATTTTTAAAATCGATTATGTGTGACGAACCCATAGTTATAGAGAAACGACGATATATACACATACGGCAAAATAGCAACTATTTTAACTGGTGACGGTGCAATTTTTAATTAACATTTAAAATGAAACAGG 19 5072575 0.97653 11 18 121 0.947368421 1.255272505 0.105263158 0 0 19 1 0 18 2L:5072517-5072647 8 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 GTGCAATT 8mer-m1 dme-miR-92b-3p 2L - 5072534 5072605 3'utr pgant5 FlyBase G6028.1 GAAACGACGATATATACACATACGGCAAAATAGCAACTATTTTAACTGGTGACGGTGCAATTTTTAATTAAC 11 5072545 0.979459481 7 9 64 0.833333333 1.176091259 0.166666667 0.454545455 0.666666667 11 3 0 15 2L:5072534-5072605 8 4.5 467 FBgn0031681 2245.746667 62.23 95.52 0.002003788 0.07231239 0.047110553 24 -6 9 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA 2L 5072906 5072913 - 2L_5072906_5072913_- 0.621873227 0.625336066 0.623604646 0.00244864 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 2L - 5072884 5073118 3'utr pgant5 FlyBase G7740.1 AAAGAAAAAAAAATCTCTCAAAATTGCACGCATATCATAAATACAGTGTAAAAATATATATATAAGCTACATTCAAACGAGAACTAAACAAAAACAATGTAAATATGATTAATGTAGCTATTAAAAATATACATTTAAATAAAATATCTATGTAGTACCTATATGATATACACATATGCAAAGCAAGCAAAACTGTACTATAAATTGCATTTAGTTCTAGGCTTAACGTTAAGTT 55 5072914 0.988669298 20 47 441 0.867647059 1.770852012 0.058823529 0.218181818 0.367647059 55 9 0 59 2L:5072884-5073118 8 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 TGCATTTA 8mer-A1 dme-miR-277-3p 2L - 5072888 5072978 3'utr pgant5 FlyBase G6029.1 AAAATATCTATGTAGTACCTATATGATATACACATATGCAAAGCAAGCAAAACTGTACTATAAATTGCATTTAGTTCTAGGCTTAACGTTA 22 5072914 0.930655179 7 22 178 1 1.531478917 0 0.409090909 0.617647059 22 0 0 34 2L:5072888-5072978 8 22.5 468 FBgn0031681 2245.746667 62.23 95.52 0.01001894 0.361561948 0.235552764 1 1 1 0.2 dme-miR-252-5p 6mer3-8 GTACTT 2L 5073313 5073318 - 2L_5073313_5073318_- 0.999948932 0.999892806 0.999920869 3.97E-05 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 2L - 5073267 5073338 3'utr pgant5 FlyBase G7742.2 TGACATTCCTAGCTAGAATTGTACTTGAGAAAATTTACGTTTGTTTTGTTTTAATTTTACCTTAAGTCACTT 18 5073304 0.797940764 5 15 140 0.952380952 1 0.142857143 0.111111111 0.238095238 18 0 1 20 2L:5073267-5073338 6 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 GTACTT 6mer3-8 dme-miR-252-5p 2L - 5073291 5073329 3'utr pgant5 FlyBase G6030.1 TAGCTAGAATTGTACTTGAGAAAATTTACGTTTGTTTTG 9 5073304 0.693871085 4 7 70 0.894736842 1.230448921 0.578947368 0.666666667 0.842105263 9 2 0 17 2L:5073291-5073329 6 7 469 FBgn0031681 2245.746667 62.23 95.52 0.003117003 0.112485939 0.073283082 -14 -14 -14 0.2 dme-miR-277-3p 7mer-A1 GCATTTA 2L 5073486 5073492 - 2L_5073486_5073492_- 0.823222682 0.821314847 0.822268765 0.001349089 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 2L - 5073470 5073514 3'utr pgant5 FlyBase G7744.2 TCGACCAAGTACCAATAAATTGGCATTTAACTGACGTTTTGTGCT 38 5073494 0.766249955 6 36 262 0.934782609 1.633468456 0.152173913 0.210526316 0.347826087 38 3 0 43 2L:5073470-5073514 7 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 GCATTTA 7mer-A1 dme-miR-277-3p 2L - 5073470 5073518 3'utr pgant5 FlyBase G6031.1 AGCTTCGACCAAGTACCAATAAATTGGCATTTAACTGACGTTTTGTGCT 30 5073494 0.809947269 4 29 212 1 1.653212514 0 0.266666667 0.511111111 30 0 0 45 2L:5073470-5073518 7 30 470 FBgn0031681 2245.746667 62.23 95.52 0.013358586 0.482082597 0.314070352 2 2 2 0.2 dme-miR-7-5p 7mer-m8 GTCTTCC 2L 5073648 5073654 - 2L_5073648_5073654_- 0.382329314 0.302246087 0.3422877 0.056627374 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 2L - 5073602 5073846 3'utr pgant5 FlyBase G7746.1 TAAATACAACTCAACTCAACGGATCCTACTAACTATACTGAGAACTTCCAATTTATGTTTAATCCTAGCCGGCTCCTGTTTTCGACGTTTATGTAGCCTAAGTTCAAGCGGATTCAATATCCCTCTCTCTCTCTCTATCTTTGTGTGCGTGAATGTGTGTAGGCGGCCGGAGGAGTCCTTCGGCAGCAGGATGTCTTCCCAAAATCTTGATGCGCGTGTGTGAATGTATAGATCTGTTTACATGA 125 5073655 0.906079959 33 118 741 0.944827586 2.136720567 0.172413793 0.136 0.255172414 125 8 0 137 2L:5073602-5073846 7 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 GTCTTCC 7mer-m8 dme-miR-7-5p 2L - 5073579 5073686 3'utr pgant5 FlyBase G6032.1 AGGCGGCCGGAGGAGTCCTTCGGCAGCAGGATGTCTTCCCAAAATCTTGATGCGCGTGTGTGAATGTATAGATCTGTTTACATGATGTGCATGTATATGTGTTTATAT 44 5073655 0.893766348 13 42 264 0.961538462 1.875061263 0.243589744 0.590909091 0.769230769 44 3 0 75 2L:5073579-5073686 7 46 471 FBgn0031681 2245.746667 62.23 95.52 0.020483165 0.739193315 0.481574539 1 1 1 0.2 dme-miR-2a-2-5p 7mer-A1 GATGAGA 2L 5095327 5095333 + 2L_5095327_5095333_+ 0.431884005 0.375805331 0.403844668 0.039653629 CG5828 FBtr0079018|FBtr0329981 5095190|5095190 5095439|5095910 2L + 5095254 5095387 3'utr CG5828 FlyBase G1873.1 GTTCAGTTTGAAATCATTGTTACCGCCACCCAAAACCCACAACCCCCTAAACAATCCCATCCCTCAATCTACCGATGAGATTCATATGTGTATAAATGTAATCTTAATGCAAGTGCTTTCGTGGTCACCCCACC 56 5095329 0.967136086 11 48 355 0.835820896 1.447158031 0.134328358 0.125 0.268656716 56 10 1 56 2L:5095254-5095387 7 CG5828 FBtr0079018|FBtr0329981 5095190|5095190 5095439|5095910 GATGAGA 7mer-A1 dme-miR-2a-2-5p 2L + 5095307 5095389 3'utr CG5828 FlyBase G1491.1 ATCCCATCCCTCAATCTACCGATGAGATTCATATGTGTATAAATGTAATCTTAATGCAAGTGCTTTCGTGGTCACCCCACCCA 29 5095329 0.929161795 5 27 208 0.897435897 1.544068044 0.128205128 0.24137931 0.435897436 29 4 0 35 2L:5095307-5095389 7 24 472 FBgn0031682 105 9.143333333 14.06333333 0.228571429 2.624863288 1.706565537 -2 -2 -2 0.2 dme-miR-79-3p 6mer3-8 TAGCTT 2L 5099541 5099546 - 2L_5099541_5099546_- 0.71599851 0.78926316 0.752630835 0.051805966 CG8680 FBtr0345334|FBtr0345333|FBtr0079025 5099498|5099175|5099498 5099601|5099601|5099601 2L - 5099507 5099564 3'utr CG8680 FlyBase G7764.1 CTTTCTATCCTGTTGCGCTAGCTTGAACTAAACTAAACTAAATAAAATTAGAACACCA 7 5099541 0.987667761 5 7 53 1 0.903089987 0 0.142857143 0.25 7 0 0 8 2L:5099507-5099564 6 CG8680 FBtr0345333|FBtr0079025|FBtr0345334 5099175|5099498|5099498 5099601|5099601|5099601 TAGCTT 6mer3-8 dme-miR-79-3p 2L - 5099499 5099575 3'utr CG8680 FlyBase G6044.1 AGCTAAAACACCTTTCTATCCTGTTGCGCTAGCTTGAACTAAACTAAACTAAATAAAATTAGAACACCAAAAAGCTA 7 5099562 0.984748284 6 7 52 1 1.079181246 0 0.571428571 0.75 7 0 0 12 2L:5099499-5099575 6 5 473 FBgn0031684 213 43.71 66.32666667 0.023474178 0.1143903 0.075384461 -5 16 5.5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 2L 5186355 5186361 + 2L_5186355_5186361_+ 0.812536802 0.82150323 0.817020016 0.006340202 Msp300 FBtr0303384 5186161 5186528 2L + 5186320 5186376 3'utr Msp300 FlyBase G1951.1 AAACGCATCCAATAGGCTTATGTTTTGAGTTTGTATACCTGAACGAAAAAGTTACTA 17 5186353 0.979338163 8 16 113 0.958333333 1.361727836 0.083333333 0.235294118 0.458333333 17 1 0 23 2L:5186320-5186376 7 Msp300 FBtr0303384 5186161 5186528 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2L + 5186323 5186370 3'utr Msp300 FlyBase G1537.1 CGCATCCAATAGGCTTATGTTTTGAGTTTGTATACCTGAACGAAAAAG 8 5186353 0.974249724 5 8 50 1 1.113943352 0.153846154 0.5 0.692307692 8 0 0 13 2L:5186323-5186370 7 9.5 474 FBgn0261836 15716.32333 95.7 146.9 0.000604467 0.099268548 0.064669843 2 2 2 0.2 dme-miR-980-5p 7mer-m1 AAAAACT 2L 5205844 5205850 + 2L_5205844_5205850_+ 0.763434766 0.765575141 0.764504953 0.001513421 Msp300 FBtr0303388|FBtr0303385|FBtr0303387|FBtr0332405 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 2L + 5205828 5205871 3'utr Msp300 FlyBase G2009.1 ACGTATATGATCCCAAAAAAACTATAGAGAACCCAAACATTTTG 8 5205834 0.933032584 5 7 25 0.9 0.954242509 0.1 0.125 0.3 8 1 0 9 2L:5205828-5205871 7 Msp300 FBtr0332405|FBtr0303385|FBtr0303387|FBtr0303388 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 AAAAACT 7mer-m1 dme-miR-980-5p 2L + 5205797 5205851 3'utr Msp300 FlyBase G1587.1 CAGCAAACAATTTATATATTCATATATACCCACGTATATGATCCCAAAAAAACTA 8 5205835 0.975254642 7 7 50 0.923076923 1.079181246 0 0.5 0.692307692 8 1 0 12 2L:5205797-5205851 7 6 475 FBgn0261836 15716.32333 95.7 146.9 0.000381769 0.062695925 0.040844112 10 9 9.5 0.2 dme-bantam-3p 8mer-A1 TGATCTCA 2L 5206021 5206028 + 2L_5206021_5206028_+ 0.63010298 0.630363732 0.630233356 0.000184343 Msp300 FBtr0303388|FBtr0303385|FBtr0303387|FBtr0332405 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 2L + 5206011 5206052 3'utr Msp300 FlyBase G2011.1 TCGCAGGATATGATCTCAAGTTCCTGCTGCCAGCGATGGGCT 9 5206020 0.96282156 5 9 49 1 1.113943352 0.153846154 0.333333333 0.538461538 9 0 0 13 2L:5206011-5206052 8 Msp300 FBtr0332405|FBtr0303385|FBtr0303387|FBtr0303388 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 TGATCTCA 8mer-A1 dme-bantam-3p 2L + 5205999 5206056 3'utr Msp300 FlyBase G1589.1 CGTGGAACATTTTCGCAGGATATGATCTCAAGTTCCTGCTGCCAGCGATGGGCTAGAA 13 5206019 0.84509398 8 13 77 1 1.146128036 0.5 0.076923077 0.142857143 13 0 0 14 2L:5205999-5206056 8 10.5 476 FBgn0261836 15716.32333 95.7 146.9 0.000668095 0.109717868 0.071477195 1 2 1.5 0.2 dme-miR-12-5p 7mer-A1 ATACTCA 2L 5206385 5206391 + 2L_5206385_5206391_+ 0.816649624 0.823340576 0.8199951 0.004731251 Msp300 FBtr0303388|FBtr0303385|FBtr0303387|FBtr0332405 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 2L + 5206368 5206419 3'utr Msp300 FlyBase G2016.1 CATTTCAAGCATTCCTGATACTCATTTCCAAATTACCAATAGACATTGACCA 48 5206382 0.981900934 5 46 343 0.983870968 1.785329835 0 0.229166667 0.403225806 48 1 0 61 2L:5206368-5206419 7 Msp300 FBtr0332405|FBtr0303385|FBtr0303387|FBtr0303388 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 ATACTCA 7mer-A1 dme-miR-12-5p 2L + 5206369 5206432 3'utr Msp300 FlyBase G1594.1 ATTTCAAGCATTCCTGATACTCATTTCCAAATTACCAATAGACATTGACCATCGAAGCCAGCTC 37 5206382 0.987366102 7 29 263 0.804347826 0.966141733 0.065217391 0.189189189 0.347826087 37 6 3 37 2L:5206369-5206432 7 40.5 477 FBgn0261836 15716.32333 95.7 146.9 0.002576939 0.423197492 0.275697754 3 3 3 0.2 "dme-miR-995-3p,dme-miR-998-3p" 7mer-A1 GGTGCTA 2L 5206502 5206508 + 2L_5206502_5206508_+ 0.722125978 0.594749929 0.658437953 0.090068504 Msp300 FBtr0303388|FBtr0303385|FBtr0303387|FBtr0332405 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 2L + 5206482 5206526 3'utr Msp300 FlyBase G2018.1 CGAAGCAAGTGTCCTATGCCGGTGCTAAACCAACCTACAAATTTT 12 5206498 0.75712565 3 12 64 1 1.146128036 0 0.166666667 0.285714286 12 0 0 14 2L:5206482-5206526 7 Msp300 FBtr0332405|FBtr0303385|FBtr0303387|FBtr0303388 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 GGTGCTA 7mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 2L + 5206478 5206513 3'utr Msp300 FlyBase G1595.1 AAAACGAAGCAAGTGTCCTATGCCGGTGCTAAACCA 7 5206498 0.948153779 2 7 32 1 1.041392685 0.181818182 0.428571429 0.636363636 7 0 0 11 2L:5206478-5206513 7 9 478 FBgn0261836 15716.32333 95.7 146.9 0.000572653 0.094043887 0.061266167 4 4 4 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 5206966 5206971 + 2L_5206966_5206971_+ 0.960441664 0.959638281 0.960039973 0.00056809 Msp300 FBtr0303388|FBtr0303385|FBtr0303387|FBtr0332405 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 2L + 5206929 5206996 3'utr Msp300 FlyBase G2019.3 ATGTAGCATTTTAAGATTTCCTTTCTTGTGAACAACTGTACCTTTATATGCATTATGATTATTAAAAA 755 5206965 0.851126469 20 736 5897 0.982824427 2.167739185 0.055343511 0.274172185 0.477099237 755 12 6 1030 2L:5206929-5206996 6 Msp300 FBtr0332405|FBtr0303385|FBtr0303387|FBtr0303388 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 5206929 5206996 3'utr Msp300 FlyBase G1599.2 ATGTAGCATTTTAAGATTTCCTTTCTTGTGAACAACTGTACCTTTATATGCATTATGATTATTAAAAA 587 5206965 0.849661248 17 574 4508 0.982121573 2.915927212 0.063170441 0.313458262 0.519666269 587 15 0 824 2L:5206929-5206996 6 599 479 FBgn0261836 15716.32333 95.7 146.9 0.03811324 6.259143156 4.077603812 1 1 1 0.2 dme-miR-92b-3p 6mer3-8 GTGCAA 2L 5219535 5219540 - 2L_5219535_5219540_- 0.99999753 0.999999829 0.999998679 1.63E-06 tkv FBtr0079088|FBtr0079086|FBtr0079087|FBtr0079089 5218998|5218998|5218998|5218998 5220092|5220092|5220092|5220092 2L - 5219488 5219601 3'utr tkv FlyBase G7773.1 AGAACATGTCCTTATATGTTTTGTTTGTATCTAGTGTTTAAGTGTAAACTTTGCAGACTTTGTGCAAGTAAATGCTGCCTTTTGTAAAATCCACGGAATTAGTTGCCTTAAGAC 42 5219521 0.987873475 14 37 330 0.894736842 1.008600172 0.298245614 0.285714286 0.473684211 42 2 4 51 2L:5219488-5219601 6 tkv FBtr0079087|FBtr0079089|FBtr0079088|FBtr0079086 5218998|5218998|5218998|5218998 5220092|5220092|5220092|5220092 GTGCAA 6mer3-8 dme-miR-92b-3p 2L - 5219509 5219573 3'utr tkv FlyBase G6049.1 ATCTAGTGTTTAAGTGTAAACTTTGCAGACTTTGTGCAAGTAAATGCTGCCTTTTGTAAAATCCA 19 5219522 0.686550624 8 18 164 0.92 1.361727836 0.32 0.263157895 0.44 19 2 0 23 2L:5219509-5219573 6 24.5 480 FBgn0003716 310.6566667 12.88 19.87333333 0.0788652 1.902173913 1.232807783 -19 -18 -18.5 0.2 dme-miR-965-3p 7mer-m8 TACGCTT 2L 5219658 5219664 - 2L_5219658_5219664_- 0.620023497 0.620200357 0.620111927 0.000125087 tkv FBtr0079088|FBtr0079086|FBtr0079087|FBtr0079089 5218998|5218998|5218998|5218998 5220092|5220092|5220092|5220092 2L - 5219651 5219678 3'utr tkv FlyBase G7774.1 TGTGCCAGCTTTTGTACGCTTTAACTAA 11 5219665 0.663212313 5 10 91 0.909090909 1 0.272727273 0 0 11 1 0 10 2L:5219651-5219678 7 tkv FBtr0079087|FBtr0079089|FBtr0079088|FBtr0079086 5218998|5218998|5218998|5218998 5220092|5220092|5220092|5220092 TACGCTT 7mer-m8 dme-miR-965-3p 2L - 5219651 5219676 3'utr tkv FlyBase G6050.1 TGCCAGCTTTTGTACGCTTTAACTAA 5 5219664 0.629195756 4 5 37 1 0.903089987 0 0.6 0.75 5 0 0 8 2L:5219651-5219676 7 7.5 481 FBgn0003716 310.6566667 12.88 19.87333333 0.024142408 0.582298137 0.377390138 1 0 0.5 0.2 dme-miR-283-5p 7mer-m8 TGATATT 2L 5272044 5272050 - 2L_5272044_5272050_- 0.578304918 0.561007423 0.569656171 0.01223118 Bsg25D FBtr0079085|FBtr0310625|FBtr0310624|FBtr0302568|FBtr0079084 5271726|5271726|5271726|5271726|5271726 5272677|5272677|5272677|5272677|5272677 2L - 5272032 5272091 3'utr Bsg25D FlyBase G7786.2 TATTGATAGAGAAAATGGAAATGAGCGTAAAAAATGATCTATGATATTGATATTGATGTA 69 5272076 0.940221704 8 66 327 0.951807229 1.897627091 0.493975904 0.144927536 0.289156627 69 4 0 79 2L:5272032-5272091 7 Bsg25D FBtr0302568|FBtr0079084|FBtr0310624|FBtr0310625|FBtr0079085 5271726|5271726|5271726|5271726|5271726 5272677|5272677|5272677|5272677|5272677 TGATATT 7mer-m8 dme-miR-283-5p 2L - 5272030 5272100 3'utr Bsg25D FlyBase G6059.1 TGTTAATTTTATTGATAGAGAAAATGGAAATGAGCGTAAAAAATGATCTATGATATTGATATTGATGTAAT 66 5272056 0.959924864 7 64 340 0.989583333 1.977723605 0.416666667 0.363636364 0.5625 66 1 0 95 2L:5272030-5272100 7 40.5 482 FBgn0000228 499.75 17.04333333 26.20333333 0.08104052 2.376295717 1.545604885 26 6 16 0.2 dme-bantam-3p 6mer2-7 GATCTC 2L 5310099 5310104 + 2L_5310099_5310104_+ 0.999961649 1 0.999980824 2.72E-05 vri FBtr0079071|FBtr0342936|FBtr0079070|FBtr0346579|FBtr0300020 5309719|5309719|5309719|5309719|5309719 5310996|5310996|5310625|5311223|5310610 2L + 5310045 5310223 3'utr vri FlyBase G2053.1 ATGTTTATCTATCCACTGTATTGAGTCTTGTAATCGTGAATGTTTAACTATATAGATCTCGTCAACTCGGAGCTAAAAAAAAATCCTTAGGGTCAGCCCAAAAGAATTTCTAATTTAACCTGTTTGTTGTATACACACAAGCTATTTGTTTGCATAGCTAGCTGGTGACCTGCGATGAG 122 5310096 0.927326496 32 104 917 0.854304636 1.156347201 0.178807947 0.18852459 0.344370861 122 14 8 129 2L:5310045-5310223 6 vri FBtr0346579|FBtr0300020|FBtr0342936|FBtr0079070|FBtr0079071 5309719|5309719|5309719|5309719|5309719 5311223|5310610|5310996|5310625|5310996 GATCTC 6mer2-7 dme-bantam-3p 2L + 5310036 5310186 3'utr vri FlyBase G1632.1 TCTGTGTGTATGTTTATCTATCCACTGTATTGAGTCTTGTAATCGTGAATGTTTAACTATATAGATCTCGTCAACTCGGAGCTAAAAAAAAATCCTTAGGGTCAGCCCAAAAGAATTTCTAATTTAACCTGTTTGTTGTATACACACAAGC 73 5310106 0.987533168 21 68 605 0.946902655 2.029383778 0.061946903 0.369863014 0.592920354 73 6 0 107 2L:5310036-5310186 6 59.5 483 FBgn0016076 178.9966667 5.846666667 8.973333333 0.332408425 10.17673888 6.630757801 3 -7 -2 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2L 5316842 5316848 - 2L_5316842_5316848_- 0.822964996 0.822972797 0.822968897 5.52E-06 Ncoa6 FBtr0329969|FBtr0307041|FBtr0307040 5315424|5315288|5316236 5317209|5317812|5317812 2L - 5316764 5316874 3'utr Ncoa6 FlyBase G7816.1 AAAATCCACCCATTGGAAATGATTTGCTAGTCATGTGAAACAGGCAATTTAATGTATAGCTCAGAAGATGAAATTTGAACAAATTAGTTGAGTAACGTATTTGAGAAGCTC 165 5316851 0.985201458 14 156 1263 0.936585366 1.806179974 0.224390244 0.206060606 0.36097561 165 11 2 192 2L:5316764-5316874 7 Ncoa6 FBtr0307040|FBtr0307041|FBtr0329969 5316236|5315288|5315424 5317812|5317812|5317209 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 5316829 5316886 3'utr Ncoa6 FlyBase G6078.2 TTACTCCCCAAAAAAATCCACCCATTGGAAATGATTTGCTAGTCATGTGAAACAGGCA 124 5316851 0.655334878 10 119 918 0.975247525 2.294466226 0.267326733 0.451612903 0.663366337 124 5 0 197 2L:5316829-5316886 7 134 484 FBgn0031698 1745.396667 21.13666667 32.68333333 0.076773379 6.339694055 4.099949006 3 3 3 0.2 dme-miR-33-5p 6mer2-7 AATGCA 2L 540306 540311 + 2L_540306_540311_+ 0.861530381 0.621814116 0.741672248 0.169505021 ush FBtr0333012|FBtr0329895|FBtr0078063|FBtr0310027|FBtr0333013 539955|540018|539955|539955|539955 540532|540560|540560|540532|540532 2L + 540219 540355 3'utr ush FlyBase G853.1 ATATACAGTACACCTAAAGGAATAACACATAGATACTTAGGTACATTAATTTAGGCGCATACCCATTAAGTGGGAACCATGACATATAATGCATGCCAAAGCTTACCACTTAGACAGAAATTAAATTGAGGGCGAGA 156 540312 0.966895551 12 145 782 0.943502825 1.523746467 0.107344633 0.128205128 0.231638418 156 6 4 167 2L:540219-540355 6 ush FBtr0310027|FBtr0333013|FBtr0329895|FBtr0078063|FBtr0333012 539955|539955|540018|539955|539955 540532|540532|540560|540560|540532 AATGCA 6mer2-7 dme-miR-33-5p 2L + 540261 540523 3'utr ush FlyBase G683.1 ACATTAATTTAGGCGCATACCCATTAAGTGGGAACCATGACATATAATGCATGCCAAAGCTTACCACTTAGACAGAAATTAAATTGAGGGCGAGAAACTACAAGTTTGCAATGGTCTGCGGAGTAGAAGGAGGCGAAGTATTCCAATGTAGATCCAATACTATAATGTAAATTACTCGCTGTTCCCCATAAAGCGAGCAATTCTAACTGTGTAATTTAAATGAGTACATTATTTATTAAGTGTGTGCGACAATAAAAGTAATT 151 540312 0.964665094 28 146 765 0.978070175 2.348304863 0.105263158 0.373333333 0.587719298 150 5 0 223 2L:540261-540523 6 117 485 FBgn0003963 1303.193333 29.53666667 45.16666667 0.089779465 3.961178197 2.590405904 -6 -6 -6 0.2 dme-bantam-3p 6mer2-7 GATCTC 2L 5539717 5539722 - 2L_5539717_5539722_- 0.995578243 0.762492706 0.879035474 0.164816338 Hel25E FBtr0331676 5539492 5540779 2L - 5539709 5539827 5'utr Hel25E FlyBase G7886.1 AAGGGACTGGCAATCACATTCGTTTCGGACGAGAACGACGCCAAGATACTTAACGAAGTACAGGATCGTTTCGATGTGAACATCAGTGAGCTGCCCGAGGAAATCGATCTCTCTACATA 49 5539715 0.958529738 10 45 220 0.923076923 1.681241237 0.442307692 0.06122449 0.115384615 49 4 0 48 2L:5539709-5539827 6 Hel25E FBtr0331676 5539492 5540779 GATCTC 6mer2-7 dme-bantam-3p 2L - 5539707 5539792 5'utr Hel25E FlyBase G6125.1 CGACGCCAAGATACTTAACGAAGTACAGGATCGTTTCGATGTGAACATCAGTGAGCTGCCCGAGGAAATCGATCTCTCTACATACA 38 5539715 0.954799446 10 34 156 0.944444444 1.40654018 0.481481481 0.289473684 0.5 38 2 1 51 2L:5539707-5539792 6 28 486 FBgn0014189 1923.333333 131.82 201.5566667 0.014558059 0.212410863 0.138918749 -7 -7 -7 0.2 dme-miR-2a-2-5p 7mer-m1 GATGAGG 2L 5540273 5540279 - 2L_5540273_5540279_- 0.45494038 0.459978542 0.457459461 0.003562475 Hel25E FBtr0331676 5539492 5540779 2L - 5540250 5540294 5'utr Hel25E FlyBase G7890.1 GAGGTCTACGTCGACGATGAGGCCAAGCTGACGCTGCACGGACTG 47 5540277 0.983732888 3 45 133 0.963636364 1.72427587 0.145454545 0.127659574 0.254545455 47 2 0 53 2L:5540250-5540294 7 Hel25E FBtr0331676 5539492 5540779 GATGAGG 7mer-m1 dme-miR-2a-2-5p 2L - 5540251 5540294 5'utr Hel25E FlyBase G6129.2 GAGGTCTACGTCGACGATGAGGCCAAGCTGACGCTGCACGGACT 32 5540277 0.974804876 4 29 69 1 1.672097858 0.042553191 0.375 0.574468085 32 0 0 47 2L:5540251-5540294 7 36 487 FBgn0014189 1923.333333 131.82 201.5566667 0.018717504 0.273099681 0.17860982 -2 -2 -2 0.2 dme-miR-304-5p 6mer2-7 GAGATT 2L 5545619 5545624 + 2L_5545619_5545624_+ 0.99987636 0.985614379 0.992745369 0.010084757 Lam FBtr0307058|FBtr0079100|FBtr0307059|FBtr0346460 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 2L + 5545565 5545631 3'utr Lam FlyBase G2114.1 AAGCACACACGAAGATCATAATTTAGAACCCAAAAACACACACACCGAGGTACAGAGATTTATTATT 14 5545628 0.965716974 6 13 66 0.882352941 1.176091259 0.058823529 0.214285714 0.352941176 14 2 0 15 2L:5545565-5545631 6 Lam FBtr0307059|FBtr0346460|FBtr0307058|FBtr0079100 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 GAGATT 6mer2-7 dme-miR-304-5p 2L + 5545601 5545635 3'utr Lam FlyBase G1680.2 CACACACACCGAGGTACAGAGATTTATTATTCAGC 8 5545627 0.968723613 4 7 43 0.916666667 1.041392685 0 0.375 0.583333333 8 1 0 11 2L:5545601-5545635 6 9 488 FBgn0002525 6943.616667 266.97 409.4166667 0.001296155 0.033711653 0.021982495 -9 -8 -8.5 0.2 dme-miR-252-5p 7mer-m8 GTACTTA 2L 5545939 5545945 + 2L_5545939_5545945_+ 0.517805002 0.559656439 0.538730721 0.029593409 Lam FBtr0307058|FBtr0079100|FBtr0307059|FBtr0346460 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 2L + 5545924 5546007 3'utr Lam FlyBase G2118.1 AACAATATTTTCGATGTACTTACGCTCCACCTACATATTTAGTAAATTAGTTTTTAAGCTATATCCCAGATAAACCAGTCGACG 11 5545938 0.985453426 6 10 91 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 2L:5545924-5546007 7 Lam FBtr0307059|FBtr0346460|FBtr0307058|FBtr0079100 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 GTACTTA 7mer-m8 dme-miR-252-5p 2L + 5545927 5545958 3'utr Lam FlyBase G1684.1 AATATTTTCGATGTACTTACGCTCCACCTACA 5 5545940 0.966843465 2 4 29 1 0.84509804 0 0.2 0.428571429 5 0 0 7 2L:5545927-5545958 7 6 489 FBgn0002525 6943.616667 266.97 409.4166667 0.000864103 0.022474435 0.014654997 1 -1 0 0.2 dme-miR-1007-3p 7mer-m8 TGAGCTT 2L 5546305 5546311 + 2L_5546305_5546311_+ 0.62020343 0.579512711 0.59985807 0.02877267 Lam FBtr0307058|FBtr0079100|FBtr0307059|FBtr0346460 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 2L + 5546239 5546358 3'utr Lam FlyBase G2121.1 TTTTTAGCCATGGCCATAGGGTTTACGATCCACCAAAACGGCTTTCTCCCGGTTTAGACCGGTTCTTGAGCTTCCTGCAGACATTTTACCGGACGAGCAACAATAAGAACAGCAACAACA 28 5546314 0.999960449 12 26 176 0.90625 0.860338007 0.03125 0.142857143 0.25 28 0 3 29 2L:5546239-5546358 7 Lam FBtr0307059|FBtr0346460|FBtr0307058|FBtr0079100 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 TGAGCTT 7mer-m8 dme-miR-1007-3p 2L + 5546283 5546339 3'utr Lam FlyBase G1687.1 TCTCCCGGTTTAGACCGGTTCTTGAGCTTCCTGCAGACATTTTACCGGACGAGCAAC 13 5546324 0.980947938 9 12 87 0.933333333 1.146128036 0.4 0.153846154 0.266666667 13 1 0 14 2L:5546283-5546339 7 11 490 FBgn0002525 6943.616667 266.97 409.4166667 0.001584189 0.041203131 0.026867494 -9 -19 -14 0.2 dme-miR-980-5p 7mer-m1 AAAAACT 2L 5546538 5546544 + 2L_5546538_5546544_+ 0.687798512 0.725250519 0.706524515 0.026482563 Lam FBtr0307058|FBtr0079100|FBtr0307059|FBtr0346460 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 2L + 5546421 5546574 3'utr Lam FlyBase G2122.1 ACGAAAGAAAATGGAAGTACACGTAGCGGCTCAGCGATCCGTCGCATTTTTTATGGGTGGGCGTGGTCGCGTTTTACGCCGGCCAAACAAATGCAACGCCCACACAGACTATTATACAAAAACTGATGAATACAACTAAATTTTAAGTACATCT 68 5546547 0.999986213 15 61 384 0.904109589 1.819543936 0.04109589 0.073529412 0.136986301 68 7 0 66 2L:5546421-5546574 7 Lam FBtr0307059|FBtr0346460|FBtr0307058|FBtr0079100 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 AAAAACT 7mer-m1 dme-miR-980-5p 2L + 5546512 5546571 3'utr Lam FlyBase G1690.1 TGCAACGCCCACACAGACTATTATACAAAAACTGATGAATACAACTAAATTTTAAGTACA 45 5546547 0.970508596 8 42 243 0.938461538 1.484299839 0.015384615 0.377777778 0.569230769 45 3 1 61 2L:5546512-5546571 7 34.5 491 FBgn0002525 6943.616667 266.97 409.4166667 0.004968592 0.129228003 0.084266232 -9 -9 -9 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 2L 5768512 5768517 - 2L_5768512_5768517_- 0.895043199 0.999373178 0.947208189 0.07377245 CG9171 FBtr0332038|FBtr0301235|FBtr0301236|FBtr0301234|FBtr0332039 5767590|5767000|5768251|5768251|5767590 5769315|5769315|5769315|5769315|5769315 2L - 5768478 5768629 3'utr CG9171 FlyBase G7904.1 ATTGGATATTCTTTTCAAAATACTCAAAAAGAGAAATTGAGAGCAACATTATTTTCGTATACCGGGGCGAGTTTCCTAGACATCAGCAAAACAAACAGTCTTACCACTTTTTTGTGTTTTATATATTTCCGCATTAAAGGCATAGATTAAAC 31 5768518 0.986638151 12 30 256 0.96875 1.491361694 0.03125 0.032258065 0.0625 31 1 0 31 2L:5768478-5768629 6 CG9171 FBtr0332039|FBtr0301236|FBtr0301234|FBtr0332038|FBtr0301235 5767590|5768251|5768251|5767590|5767000 5769315|5769315|5769315|5769315|5769315 TGTGTT 6mer3-8 dme-miR-317-3p 2L - 5768495 5768533 3'utr CG9171 FlyBase G6144.1 AGTCTTACCACTTTTTTGTGTTTTATATATTTCCGCATT 5 5768518 0.982122955 4 5 69 1 1 0 0.6 0.8 5 0 0 10 2L:5768495-5768533 6 6.5 492 FBgn0031738 813.1933333 26.58333333 40.79333333 0.007993179 0.244514107 0.159339761 1 1 1 0.2 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 5800817 5800824 - 2L_5800817_5800824_- 0.589643158 0.608598806 0.599120982 0.013403633 CG14005 FBtr0079160 5800515 5800869 2L - 5800700 5800859 coding-3'utr CG14005 FlyBase G7919.1 TAGCACCACGTGGTAAGGACATTGTATGACAGCTTTAGCTTTAAGTTGGGAATAGAGTCGCGGCGCTCGACCCTGTGTATGTTTTTCAATTCGTTCCTTTCTCAGACACAGATGTCTAATTCACTCGACGTACAAAGCAGCAGCATAGCGAACCGAAGAT 105 5800825 0.999996235 14 100 964 0.96124031 1.792391689 0.186046512 0.19047619 0.341085271 105 4 1 124 2L:5800700-5800859 8 CG14005 FBtr0079160 5800515 5800869 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 5800788 5800870 stop_codon CG14005 FlyBase G6159.1 ATCCCGACTACTAGCACCACGTGGTAAGGACATTGTATGACAGCTTTAGCTTTAAGTTGGGAATAGAGTCGCGGCGCTCGACC 55 5800825 0.989660082 6 52 502 0.957746479 1.832508913 0.183098592 0.2 0.38028169 55 3 0 68 2L:5800788-5800870 8 67 493 FBgn0031739 237 20.57 31.17666667 0.282700422 3.257170637 2.149043088 1 1 1 0.2 dme-bantam-3p 6mer3-8 TGATCT 2L 5955067 5955072 + 2L_5955067_5955072_+ 0.773193872 0.836475159 0.804834516 0.044746636 CG9044 FBtr0333231|FBtr0273412 5955000|5955000 5955235|5955235 2L + 5955016 5955162 3'utr CG9044 FlyBase G2192.1 TAGAAAATTGAATATAGCCTGTACCAATTATTGTGCAAAGTTTAAAATTGTTGATCTTAATTGACTATGTTATTTAATGTCAGATTAGTTTTATTAACTTAGGCTAGAGCTTTCAATCAATAAGAAATGGTGCTGTACCACGATTTA 136 5955065 0.885226338 25 129 1131 0.935294118 1.50242712 0.123529412 0.205882353 0.364705882 136 7 4 159 2L:5955016-5955162 6 CG9044 FBtr0333231|FBtr0273412 5955000|5955000 5955235|5955235 TGATCT 6mer3-8 dme-bantam-3p 2L + 5955016 5955095 3'utr CG9044 FlyBase G1739.1 TAGAAAATTGAATATAGCCTGTACCAATTATTGTGCAAAGTTTAAAATTGTTGATCTTAATTGACTATGTTATTTAATGT 79 5955065 0.840761897 12 76 675 0.972972973 1.73239376 0.171171171 0.316455696 0.513513514 79 2 1 108 2L:5955016-5955095 6 62.5 494 FBgn0031752 511 13.98 21.38 0.122309198 4.470672389 2.923292797 2 2 2 0.2 dme-miR-184-5p 8mer-A1 TGATAAGA 2L 5973473 5973480 - 2L_5973473_5973480_- 0.586465472 0.599728034 0.593096753 0.009378004 chic FBtr0079235|FBtr0309213|FBtr0079234|FBtr0079236 5972898|5973005|5972898|5972113 5973576|5973576|5973576|5973576 2L - 5973412 5973656 stop_codon chic FlyBase G7933.1 ACGAGGATCCCGTTCAGCCCCAGCAGGCCGCTTCCGTGGTAGAGAAACTTGGAGATTATCTGATTACTTGCGGGTACTAGGAGAATAGATCAACACAAACACCCCCATCAACCACAACAACAACAACACACACACACCAACAACTACAACTACAACAACAACAGCAGCAACAAATTTGATAAGAGCGAACCGTAAATGAACTAATAACACATAAAAAGTAATTATTAATATTTAAATTTATGGGA 90 5973481 0.964330644 25 84 434 0.935185185 1.305351369 0.259259259 0.166666667 0.305555556 90 3 4 101 2L:5973412-5973656 8 chic FBtr0079234|FBtr0079236|FBtr0079233|FBtr0309212|FBtr0079235|FBtr0309213 5972898|5972113|5973201|5973322|5972898|5973005 5973576|5973576|5973576|5973576|5973576|5973576 TGATAAGA 8mer-A1 dme-miR-184-5p 2L - 5973440 5973496 3'utr chic FlyBase G6171.1 ACAGCAGCAACAAATTTGATAAGAGCGAACCGTAAATGAACTAATAACACATAAAAA 19 5973481 0.932080192 7 19 74 1 1.431363764 0.148148148 0.263157895 0.481481481 19 0 0 27 2L:5973440-5973496 8 21 495 FBgn0000308 17707.58333 1966.28 3025.8 0.001185933 0.010680066 0.006940313 1 1 1 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC 2L 5990208 5990214 - 2L_5990208_5990214_- 0.657972609 0.659455786 0.658714198 0.001048781 lid FBtr0307071|FBtr0345336 5989461|5989398 5990641|5990641 2L - 5990139 5990277 3'utr lid FlyBase G7940.1 AATTTTATAATATATTTTACCATTACCTGCTATTCTTAGTTTTTGTTAATTTAATTCACTTTTTGTGTTCGCCTCTCGAGTTTTGGTTCAGTGCGCACGCAAAGTTTTCTTACGTTTTATTTGACTTTTTCCTTTAATC 197 5990215 0.946594863 15 190 2416 0.969957082 1.655138435 0.060085837 0.137055838 0.270386266 197 3 4 226 2L:5990139-5990277 7 lid FBtr0307071|FBtr0345336 5989461|5989398 5990641|5990641 TGTGTTC 7mer-m8 dme-miR-317-3p 2L - 5990196 5990271 3'utr lid FlyBase G6180.1 ATAATATATTTTACCATTACCTGCTATTCTTAGTTTTTGTTAATTTAATTCACTTTTTGTGTTCGCCTCTCGAGTT 119 5990215 0.827908948 7 111 1396 0.943396226 1.574031268 0.006289308 0.277310924 0.459119497 119 6 3 150 2L:5990196-5990271 7 72 496 FBgn0031759 1960.226667 33.73333333 51.87 0.036730446 2.134387352 1.388085599 1 1 1 0.2 dme-miR-33-5p 7mer-A1 AATGCAA 2L 5990345 5990351 - 2L_5990345_5990351_- 0.782751111 0.763373755 0.773062433 0.01370182 lid FBtr0307071|FBtr0345336 5989461|5989398 5990641|5990641 2L - 5990331 5990378 3'utr lid FlyBase G7942.1 GGATTAATAATTAAGCAAAAGATATGAAATGCAAACAAAGCAACACAA 13 5990350 0.90985326 5 13 37 1 1.204119983 0.25 0.230769231 0.375 13 0 0 16 2L:5990331-5990378 7 lid FBtr0307071|FBtr0345336 5989461|5989398 5990641|5990641 AATGCAA 7mer-A1 dme-miR-33-5p 2L - 5990335 5990371 3'utr lid FlyBase G6181.1 TAATTAAGCAAAAGATATGAAATGCAAACAAAGCAAC 6 5990354 0.935340308 2 5 16 0.909090909 1 0.181818182 0.5 0.727272727 6 1 0 10 2L:5990335-5990371 7 6.5 497 FBgn0031759 1960.226667 33.73333333 51.87 0.003315943 0.192687747 0.125313283 -1 3 1 0.2 dme-miR-1008-3p 8mer-A1 AGCTGTGA 2L 6002422 6002429 + 2L_6002422_6002429_+ 0.385774929 0.476188833 0.430981881 0.063932282 Tsp26A FBtr0307300|FBtr0332600|FBtr0113024 6001736|6001736|6001736 6003738|6003738|6003738 2L + 6002409 6002448 3'utr Tsp26A FlyBase G2221.1 TATCTTGAAATGCAGCTGTGATATATTTTTAAAGAAAAGT 57 6002434 0.705512977 10 46 493 0.825 1.51851394 0.1125 0.263157895 0.475 57 13 1 66 2L:6002409-6002448 8 Tsp26A FBtr0332600|FBtr0113024|FBtr0307300 6001736|6001736|6001736 6003738|6003738|6003738 AGCTGTGA 8mer-A1 dme-miR-1008-3p 2L + 6002408 6002452 3'utr Tsp26A FlyBase G1771.1 TTATCTTGAAATGCAGCTGTGATATATTTTTAAAGAAAAGTATAG 52 6002435 0.961990547 11 47 484 0.9375 1.875061263 0.125 0.403846154 0.6125 52 5 0 75 2L:6002408-6002452 8 54.5 498 FBgn0031760 374.3466667 15.47666667 23.65666667 0.145586978 3.52143011 2.303790334 -12 -13 -12.5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 6002839 6002844 + 2L_6002839_6002844_+ 0.999948482 0.999971741 0.999960111 1.64E-05 Tsp26A FBtr0307300|FBtr0332600|FBtr0113024 6001736|6001736|6001736 6003738|6003738|6003738 2L + 6002817 6002860 3'utr Tsp26A FlyBase G2225.1 AGGAAAACATTGATTCGCTCTTGTACCTTTTTAAATCTATATTG 39 6002838 0.710189588 6 39 430 1 1.662757832 0.043478261 0.179487179 0.304347826 39 0 0 46 2L:6002817-6002860 6 Tsp26A FBtr0332600|FBtr0113024|FBtr0307300 6001736|6001736|6001736 6003738|6003738|6003738 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 6002825 6002861 3'utr Tsp26A FlyBase G1773.1 ATTGATTCGCTCTTGTACCTTTTTAAATCTATATTGC 26 6002838 0.72004263 5 26 302 1 1.544068044 0 0.307692308 0.485714286 26 0 0 35 2L:6002825-6002861 6 32.5 499 FBgn0031760 374.3466667 15.47666667 23.65666667 0.086817923 2.099935387 1.373819924 1 1 1 0.2 dme-miR-980-3p 8mer-A1 GGCAGCTA 2L 6003357 6003364 + 2L_6003357_6003364_+ 0.660234306 0.662129598 0.661181952 0.001340179 Tsp26A FBtr0307300|FBtr0332600|FBtr0113024 6001736|6001736|6001736 6003738|6003738|6003738 2L + 6003307 6003382 3'utr Tsp26A FlyBase G2227.1 TGCCCAAAAATCTTGTATGTACACTTGCAACTGAGCAATTGGCCAGATGTGGCAGCTAATACACTTTTTGGATATG 104 6003356 0.966414869 6 101 545 0.977777778 2.120573931 0.007407407 0.230769231 0.407407407 104 3 0 132 2L:6003307-6003382 8 Tsp26A FBtr0332600|FBtr0113024|FBtr0307300 6001736|6001736|6001736 6003738|6003738|6003738 GGCAGCTA 8mer-A1 dme-miR-980-3p 2L + 6003303 6003380 3'utr Tsp26A FlyBase G1775.1 AATATGCCCAAAAATCTTGTATGTACACTTGCAACTGAGCAATTGGCCAGATGTGGCAGCTAATACACTTTTTGGATA 58 6003356 0.965372589 4 57 307 0.988505747 1.934498451 0 0.362068966 0.574712644 58 1 0 86 2L:6003303-6003380 8 79 500 FBgn0031760 374.3466667 15.47666667 23.65666667 0.211034335 5.104458324 3.3394392 1 1 1 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2L 6007585 6007591 - 2L_6007585_6007591_- 0.438032653 0.667943756 0.552988204 0.162571698 CG9098 FBtr0332602|FBtr0079228|FBtr0079229 6007362|6007362|6007503 6007907|6007907|6007907 2L - 6007576 6007616 3'utr CG9098 FlyBase G7976.1 AAGAGCCACCTCACTCTGATGTACTACCAAAGTCTTGTATT 22 6007597 0.706474109 4 20 127 0.857142857 1.380211242 0.142857143 0.181818182 0.357142857 22 4 0 24 2L:6007576-6007616 7 CG9098 FBtr0079228|FBtr0079229|FBtr0332602 6007362|6007503|6007362 6007907|6007907|6007907 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 6007580 6007606 3'utr CG9098 FlyBase G6210.1 TCACTCTGATGTACTACCAAAGTCTTG 7 6007595 0.679050878 2 7 37 1 1 0.1 0.428571429 0.6 7 0 0 10 2L:6007580-6007606 7 13.5 501 FBgn0031762 5 0.196666667 0.31 2.7 68.6440678 43.5483871 6 4 5 0.2 dme-miR-277-3p 7mer-A1 GCATTTA 2L 6041268 6041274 - 2L_6041268_6041274_- 0.822162568 0.823315778 0.822739173 0.000815436 ade2 FBtr0079219|FBtr0079220|FBtr0079221 6041179|6041179|6041179 6041313|6041313|6041313 2L - 6041228 6041289 3'utr ade2 FlyBase G7995.1 TTAAATAGGTTCTTGGCATTTATGACCTGATATATCTAAATACTATATACACGAATTTGTTT 63 6041270 0.987501565 14 59 593 0.929411765 1.897627091 0.258823529 0.238095238 0.435294118 63 6 0 79 2L:6041228-6041289 7 ade2 FBtr0079219|FBtr0079220|FBtr0079221 6041179|6041179|6041179 6041313|6041313|6041313 GCATTTA 7mer-A1 dme-miR-277-3p 2L - 6041248 6041289 3'utr ade2 FlyBase G6217.1 TTAAATAGGTTCTTGGCATTTATGACCTGATATATCTAAATA 30 6041269 0.652043457 8 30 277 1 1.716003344 0.173076923 0.6 0.769230769 30 0 0 52 2L:6041248-6041289 7 45 502 FBgn0000052 854.3333333 23.79 36.27666667 0.052672649 1.891551072 1.240466783 -4 -5 -4.5 0.2 dme-miR-79-3p 6mer2-7 AGCTTT 2L 6046713 6046718 - 2L_6046713_6046718_- 0.999190634 0.980803379 0.989997006 0.013001714 slmo FBtr0343130|FBtr0079218|FBtr0299810|FBtr0079217|FBtr0112945 6046514|6046652|6046649|6046652|6046649 6047052|6047052|6047052|6047052|6047052 2L - 6046678 6046732 3'utr slmo FlyBase G8015.1 ACATAGTCAATGTAAGCTTTGTAAGCCGCCGCAGATTTCGAAGAACGAGAGGAGC 12 6046719 0.970537166 7 12 69 1 1.113943352 0 0.083333333 0.153846154 12 0 0 13 2L:6046678-6046732 6 slmo FBtr0112945|FBtr0343130|FBtr0079218|FBtr0299810|FBtr0079217 6046649|6046514|6046652|6046649|6046652 6047052|6047052|6047052|6047052|6047052 AGCTTT 6mer2-7 dme-miR-79-3p 2L - 6046686 6046728 3'utr slmo FlyBase G6233.1 AGTCAATGTAAGCTTTGTAAGCCGCCGCAGATTTCGAAGAACG 6 6046720 0.822863583 3 5 35 0.933333333 0.84509804 0.066666667 0.833333333 0.933333333 6 0 1 14 2L:6046686-6046728 6 7 503 FBgn0029161 669.6266667 62.72666667 95.86333333 0.010453586 0.111595281 0.07302062 1 2 1.5 0.2 dme-miR-305-5p 7mer-m8 AGTACAA 2L 6046966 6046972 - 2L_6046966_6046972_- 0.641758054 0.642738741 0.642248398 0.000693389 slmo FBtr0343130|FBtr0079218|FBtr0299810|FBtr0079217|FBtr0112945 6046514|6046652|6046649|6046652|6046649 6047052|6047052|6047052|6047052|6047052 2L - 6046929 6047034 3'utr slmo FlyBase G8017.1 TGCAAGGTCGCGCGGGGGCTGTTCACTAGTGAATTATTTAGATGGCGCGCGGTCGTCGTTTTAGTACAACTAATTAATCGATGGCACGATGGACATGGACAGCAAC 82 6046974 0.942682906 14 80 621 0.978947368 1.667452953 0.336842105 0.146341463 0.263157895 82 1 1 93 2L:6046929-6047034 7 slmo FBtr0112945|FBtr0343130|FBtr0079218|FBtr0299810|FBtr0079217 6046649|6046514|6046652|6046649|6046652 6047052|6047052|6047052|6047052|6047052 AGTACAA 7mer-m8 dme-miR-305-5p 2L - 6046929 6047030 3'utr slmo FlyBase G6235.1 AGGTCGCGCGGGGGCTGTTCACTAGTGAATTATTTAGATGGCGCGCGGTCGTCGTTTTAGTACAACTAATTAATCGATGGCACGATGGACATGGACAGCAAC 56 6046974 0.882109073 11 54 384 0.948051948 1.164352856 0.376623377 0.267857143 0.467532468 56 0 4 73 2L:6046929-6047030 7 40.5 504 FBgn0029161 669.6266667 62.72666667 95.86333333 0.060481462 0.645658412 0.422476442 2 2 2 0.2 dme-miR-277-3p 7mer-m8 TGCATTT 2L 6053818 6053824 + 2L_6053818_6053824_+ 0.614230676 0.603744171 0.608987423 0.007415075 CG9135 FBtr0343121 6053257 6053877 2L + 6053717 6053866 3'utr CG9135 FlyBase G2252.1 ACTACAAAACACGTAAATTAACGAACTAAGCGCATAGGTTACATATAAAAAGTATACCATGGAAAAATCCAATACCAGTTGCAACTATTAATAGTACATCATGCATTTTAATCTTATACAAAGGAATATTTAAATAAAGAGAATGTTAGT 28 6053818 0.978030085 14 26 180 0.971428571 1.230448921 0.057142857 0.178571429 0.342857143 28 0 1 34 2L:6053717-6053866 7 CG9135 FBtr0343121 6053257 6053877 TGCATTT 7mer-m8 dme-miR-277-3p 2L + 6053760 6053834 3'utr CG9135 FlyBase G1794.1 TATAAAAAGTATACCATGGAAAAATCCAATACCAGTTGCAACTATTAATAGTACATCATGCATTTTAATCTTATA 18 6053818 0.987390213 7 17 148 0.961538462 1.397940009 0 0.333333333 0.538461538 18 1 0 25 2L:6053760-6053834 7 11.5 505 FBgn0031769 791.34 43.62666667 67.18666667 0.014532312 0.263600244 0.171164914 0 0 0 0.2 dme-miR-14-3p 7mer-m8 AAGACTG 2L 6095586 6095592 + 2L_6095586_6095592_+ 0.671794872 0.671750026 0.671772449 3.17E-05 Kr-h1 FBtr0344438|FBtr0344437 6095555|6095555 6096498|6096498 2L + 6095552 6095743 stop_codon Kr-h1 FlyBase G2287.1 CCTAGGGGTCCAAGGCCGATCCCCAATCAGCATTAAGACTGTCCAAACAAATTCTAACTGAAATTAGCCTAAGTTTTTTCTCTGAGGTTCGGGGTTAGGCCTGGAAAAAGAAAGCATAGAAACGTATGGATATGGCAGTGAGATAGTTTTCCAGCAGCGAAAATGAAAATGCCAAAAGTATTAAAAAAGGGA 168 6095583 0.941213682 18 157 850 0.928205128 1.78055732 0.087179487 0.160714286 0.276923077 168 12 2 181 2L:6095552-6095743 7 Kr-h1 FBtr0344437|FBtr0344438 6095555|6095555 6096498|6096498 AAGACTG 7mer-m8 dme-miR-14-3p 2L + 6095544 6095661 stop_codon Kr-h1 FlyBase G1818.1 CAAGGCCTCCTAGGGGTCCAAGGCCGATCCCCAATCAGCATTAAGACTGTCCAAACAAATTCTAACTGAAATTAGCCTAAGTTTTTTCTCTGAGGTTCGGGGTTAGGCCTGGAAAAAG 106 6095584 0.999444007 16 101 522 0.953020134 1.851258349 0.053691275 0.320754717 0.516778523 106 6 1 142 2L:6095544-6095661 7 97 506 FBgn0266450 461.9366667 12.49333333 19.07 0.209985496 7.764140875 5.086523335 3 2 2.5 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 2L 6095894 6095899 + 2L_6095894_6095899_+ 1 0.999995743 0.999997871 3.04E-06 Kr-h1 FBtr0344438|FBtr0344437 6095555|6095555 6096498|6096498 2L + 6095857 6095940 3'utr Kr-h1 FlyBase G2288.1 AGTTTGGCATATACAATGTAGGTATAGTTTGTTTTCCTGTGTTGTCCACTTAGTCAAATTGCAGCAATTGGCATTATGCGTATT 17 6095899 0.990520638 11 16 166 0.954545455 1.322219295 0.181818182 0.235294118 0.409090909 17 1 0 21 2L:6095857-6095940 6 Kr-h1 FBtr0344437|FBtr0344438 6095555|6095555 6096498|6096498 TGTGTT 6mer3-8 dme-miR-317-3p 2L + 6095856 6095929 3'utr Kr-h1 FlyBase G1820.1 TAGTTTGGCATATACAATGTAGGTATAGTTTGTTTTCCTGTGTTGTCCACTTAGTCAAATTGCAGCAATTGGCA 19 6095906 0.755073136 11 18 168 1 1.397940009 0.4 0.315789474 0.48 19 0 0 25 2L:6095856-6095929 6 10.5 507 FBgn0266450 461.9366667 12.49333333 19.07 0.022730389 0.840448239 0.550603041 -5 -12 -8.5 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 6096906 6096912 - 2L_6096906_6096912_- 0.655387363 0.655288995 0.655338179 6.96E-05 CG9175 FBtr0079212|FBtr0079211 6096696|6096696 6097167|6097167 2L - 6096885 6096954 3'utr CG9175 FlyBase G8041.1 TGTTTATCTCTCTAGCCACCGCAAACGAAGCCTTGCTCGTTTGGCAGCTTTGCCCGTTGTACATGATTTT 1317 6096914 0.790274106 11 1305 11776 0.987991995 2.170555059 0.350233489 0.119210326 0.226150767 1317 9 9 1481 2L:6096885-6096954 7 CG9175 FBtr0079212|FBtr0079211 6096696|6096696 6097167|6097167 GGCAGCT 7mer-m8 dme-miR-980-3p 2L - 6096889 6096958 3'utr CG9175 FlyBase G6254.1 AATTTGTTTATCTCTCTAGCCACCGCAAACGAAGCCTTGCTCGTTTGGCAGCTTTGCCCGTTGTACATGA 891 6096914 0.851952976 11 886 7867 0.995780591 3.151063253 0.319268636 0.405162738 0.627285513 891 6 0 1416 2L:6096889-6096958 7 1092 508 FBgn0031779 121.6666667 7.2 10.92 8.975342466 151.6666667 100 2 2 2 0.2 dme-miR-970-3p 6mer3-8 TCTTAT 2L 6096990 6096995 - 2L_6096990_6096995_- 0.995741556 0.994828554 0.995285055 0.000645588 CG9175 FBtr0079212|FBtr0079211 6096696|6096696 6097167|6097167 2L - 6096956 6097024 3'utr CG9175 FlyBase G8042.1 AGTGCATAGTTTGTGCCGGCTGCCTTATCTCTTATACTAATTGCAATGTTTGCTTAGTTGTATCATAAT 115 6096993 0.988423229 12 109 1002 0.954545455 1.46834733 0.207792208 0.269565217 0.454545455 115 3 4 147 2L:6096956-6097024 6 CG9175 FBtr0079212|FBtr0079211 6096696|6096696 6097167|6097167 TCTTAT 6mer3-8 dme-miR-970-3p 2L - 6096981 6097031 3'utr CG9175 FlyBase G6255.1 TAGTTTAAGTGCATAGTTTGTGCCGGCTGCCTTATCTCTTATACTAATTGC 110 6096993 0.723822713 7 105 923 0.9625 1.710399466 0.31875 0.336363636 0.54375 110 4 2 154 2L:6096981-6097031 6 102.5 509 FBgn0031779 121.6666667 7.2 10.92 0.842465753 14.23611111 9.386446886 -2 -2 -2 0.2 dme-miR-277-3p 6mer3-8 TGCATT 2L 6097131 6097136 - 2L_6097131_6097136_- 0.89705019 0.961332826 0.929191508 0.045454662 CG9175 FBtr0079212|FBtr0079211 6096696|6096696 6097167|6097167 2L - 6097110 6097204 stop_codon CG9175 FlyBase G8043.1 CGCCGTGTTCGTGCTGTGCTCCTACATTGGCATCTGATGCTCAATGGCCAGAAGAGAGTTATTCGATTTGCATTATTAGTTTGTAAACAGGGTTT 44 6097138 0.809251049 12 43 476 0.980769231 1.707570176 0.173076923 0.181818182 0.307692308 44 1 0 51 2L:6097110-6097204 6 CG9175 FBtr0079212|FBtr0079211 6096696|6096696 6097167|6097167 TGCATT 6mer3-8 dme-miR-277-3p 2L - 6097097 6097186 stop_codon CG9175 FlyBase G6256.1 CTCCTACATTGGCATCTGATGCTCAATGGCCAGAAGAGAGTTATTCGATTTGCATTATTAGTTTGTAAACAGGGTTTAGTTTTCTGCAAT 26 6097138 0.793856487 9 24 286 0.945945946 1.243038049 0.108108108 0.346153846 0.540540541 26 1 1 35 2L:6097097-6097186 6 27.5 510 FBgn0031779 121.6666667 7.2 10.92 0.226027397 3.819444444 2.518315018 2 2 2 0.2 dme-miR-1008-3p 7mer-m8 AGCTGTG 2L 6123088 6123094 + 2L_6123088_6123094_+ 0.572476057 0.668915538 0.620695797 0.068192954 stai FBtr0333406|FBtr0079196|FBtr0079197|FBtr0304908|FBtr0079198 6123063|6123063|6123063|6123063|6123063 6123899|6123899|6124653|6124653|6123899 2L + 6123008 6123107 stop_codon stai FlyBase G2299.1 AAGGCCCAGGCCCAGGATTTGGATGGTCAGCAGAGCGCCATTGCCTCCTCAGGCTAAGTGGAGAACGATCCTGCATCGAGAGCTGTGCTCACCCACTGCA 43 6123093 0.955149943 14 39 180 0.884615385 1.662757832 0.173076923 0.186046512 0.326923077 43 6 0 46 2L:6123008-6123107 7 stai FBtr0079196|FBtr0079197|FBtr0304908|FBtr0079198|FBtr0333406 6123063|6123063|6123063|6123063|6123063 6123899|6124653|6124653|6123899|6123899 AGCTGTG 7mer-m8 dme-miR-1008-3p 2L + 6123008 6123108 stop_codon stai FlyBase G1827.1 AAGGCCCAGGCCCAGGATTTGGATGGTCAGCAGAGCGCCATTGCCTCCTCAGGCTAAGTGGAGAACGATCCTGCATCGAGAGCTGTGCTCACCCACTGCAA 30 6123093 0.972900263 15 24 144 0.853658537 1.544068044 0.243902439 0.266666667 0.463414634 30 6 0 35 2L:6123008-6123108 7 23 511 FBgn0266521 1156.12 73.38 111.3866667 0.019894129 0.313436904 0.20648791 -5 -5 -5 0.2 dme-miR-33-5p 7mer-A1 AATGCAA 2L 6123354 6123360 + 2L_6123354_6123360_+ 0.449180967 0.473869079 0.461525023 0.017457123 stai FBtr0333406|FBtr0079196|FBtr0079197|FBtr0304908|FBtr0079198 6123063|6123063|6123063|6123063|6123063 6123899|6123899|6124653|6124653|6123899 2L + 6123130 6123396 3'utr stai FlyBase G2300.1 AAAAAGAACAGCAACACTGCATAATACACCAACACATATTTAAGCAAGAAAACCCTTAAAACTGAAAACGATTTCTCAAAATTTCCAAGTATTATGAAAGCAAACGAAGCGAAGGGCAAGGGCAAAGTCTCAAGATACCGCTGAGCGAGTTTTCTCACGAGCTCTATAATGAAACACGAATAAGCTACTATAAAGCGAAAAGAAATGAATGCTTACGGCAAGTTAATGCAAAAAAAAAATTAGTAAAGGAAATCTACATTTAAACTT 204 6123352 0.964225743 32 184 958 0.90376569 1.73239376 0.138075314 0.137254902 0.263598326 204 20 3 216 2L:6123130-6123396 7 stai FBtr0079196|FBtr0079197|FBtr0304908|FBtr0079198|FBtr0333406 6123063|6123063|6123063|6123063|6123063 6123899|6124653|6124653|6123899|6123899 AATGCAA 7mer-A1 dme-miR-33-5p 2L + 6123131 6123373 3'utr stai FlyBase G1828.1 AAAAGAACAGCAACACTGCATAATACACCAACACATATTTAAGCAAGAAAACCCTTAAAACTGAAAACGATTTCTCAAAATTTCCAAGTATTATGAAAGCAAACGAAGCGAAGGGCAAGGGCAAAGTCTCAAGATACCGCTGAGCGAGTTTTCTCACGAGCTCTATAATGAAACACGAATAAGCTACTATAAAGCGAAAAGAAATGAATGCTTACGGCAAGTTAATGCAAAAAAAAAATTAGT 135 6123352 0.955968491 28 120 568 0.882022472 1.718778398 0.140449438 0.22962963 0.415730337 135 19 2 157 2L:6123131-6123373 7 47 512 FBgn0266521 1156.12 73.38 111.3866667 0.040653219 0.640501499 0.421953555 2 2 2 0.2 dme-miR-33-5p 6mer2-7 AATGCA 2L 6123429 6123434 + 2L_6123429_6123434_+ 0.999556043 0.999568404 0.999562223 8.77E-06 stai FBtr0333406|FBtr0079196|FBtr0079197|FBtr0304908|FBtr0079198 6123063|6123063|6123063|6123063|6123063 6123899|6123899|6124653|6124653|6123899 2L + 6123414 6123445 3'utr stai FlyBase G2301.1 AGCCTATGCAAGTTGAATGCATGCCTGTCATT 7 6123431 0.706712033 4 6 45 0.9 0.653212514 0 0.285714286 0.5 7 0 1 9 2L:6123414-6123445 6 stai FBtr0079196|FBtr0079197|FBtr0304908|FBtr0079198|FBtr0333406 6123063|6123063|6123063|6123063|6123063 6123899|6124653|6124653|6123899|6123899 AATGCA 6mer2-7 dme-miR-33-5p 2L + 6123412 6123442 3'utr stai FlyBase G1829.1 AAAGCCTATGCAAGTTGAATGCATGCCTGTC 7 6123426 0.710015409 3 5 32 0.833333333 1 0.25 0.571428571 0.75 7 2 0 10 2L:6123412-6123442 6 6 513 FBgn0266521 1156.12 73.38 111.3866667 0.005189773 0.081766149 0.053866411 -2 3 0.5 0.2 dme-miR-307a-3p 7mer-m8 GGTTGTG 2L 6331071 6331077 + 2L_6331071_6331077_+ 0.666589199 0.702971891 0.684780545 0.025726454 PDZ-GEF FBtr0333242|FBtr0300039|FBtr0079249|FBtr0300038 6330837|6330837|6330642|6330837 6332789|6331750|6331750|6331750 2L + 6331044 6331158 3'utr PDZ-GEF FlyBase G2335.1 CAGATAGAGTTGCCAAAATTTGTGAATGGTTGTGGTTTCAATTTCGCCAGCAATCAGAAACAACGTATCCCCGATCACCTTTACCCTTTACGGAGCTGCAAAAATATTACTAGCA 67 6331063 0.956289151 15 66 529 0.986842105 1.875061263 0.276315789 0.134328358 0.236842105 67 1 0 75 2L:6331044-6331158 7 PDZ-GEF FBtr0300038|FBtr0079249|FBtr0300039|FBtr0333242 6330837|6330642|6330837|6330837 6331750|6331750|6331750|6332789 GGTTGTG 7mer-m8 dme-miR-307a-3p 2L + 6331045 6331082 3'utr PDZ-GEF FlyBase G1853.1 AGATAGAGTTGCCAAAATTTGTGAATGGTTGTGGTTTC 16 6331070 0.659142935 5 14 141 0.894736842 0.929418926 0.368421053 0.1875 0.315789474 16 1 1 17 2L:6331045-6331082 7 23 514 FBgn0265778 1055.34 20.3 30.87333333 0.021793924 1.133004926 0.744979486 8 1 4.5 0.2 dme-miR-2b-2-5p 7mer-m8 TTGAAGA 2L 6331355 6331361 + 2L_6331355_6331361_+ 0.543111681 0.535797916 0.539454799 0.005171638 PDZ-GEF FBtr0333242|FBtr0300039|FBtr0079249|FBtr0300038 6330837|6330837|6330642|6330837 6332789|6331750|6331750|6331750 2L + 6331184 6331398 3'utr PDZ-GEF FlyBase G2336.1 TAGTAACTGAGAATTTAATTTTAGTTAGGGCTTACCATTTATTATTTAATTTAGCTAAATTCTTTGTACACACTTTCTACCCATCATTCACCGCCAGCGTAGAAGTTGCCTTTTCTCTTAAAAGAAAACGTCTGCAGGCAGACCCTCTCAGCAGACCCAACTAAAACTCTTTTGAAGACTTTTCGTCGGCATTTACAAGTGTAAGAACAGAACAA 43 6331365 0.98260541 21 42 319 0.963636364 1.72427587 0.2 0.23255814 0.4 43 2 0 53 2L:6331184-6331398 7 PDZ-GEF FBtr0300038|FBtr0079249|FBtr0300039|FBtr0333242 6330837|6330642|6330837|6330837 6331750|6331750|6331750|6332789 TTGAAGA 7mer-m8 dme-miR-2b-2-5p 2L + 6331310 6331377 3'utr PDZ-GEF FlyBase G1856.1 AACGTCTGCAGGCAGACCCTCTCAGCAGACCCAACTAAAACTCTTTTGAAGACTTTTCGTCGGCATTT 10 6331330 0.840109877 7 9 59 0.888888889 1.204119983 0 0.6 0.777777778 10 2 0 16 2L:6331310-6331377 7 12.5 515 FBgn0265778 1055.34 20.3 30.87333333 0.011844524 0.615763547 0.404880155 -10 25 7.5 0.2 dme-miR-252-5p 6mer3-8 GTACTT 2L 6332132 6332137 + 2L_6332132_6332137_+ 0.646051785 0.941307815 0.7936798 0.20877752 PDZ-GEF FBtr0333242 6330837 6332789 2L + 6332079 6332185 3'utr PDZ-GEF FlyBase G2343.1 AAATCAAATCAAACGATATTGGATATGCTATATATGTATACATTGTGCTCTTTGTACTTTTAAGTTAGACTAAATACCAAATTTGCTTTTTAAGGCTTAAGAAAAAC 82 6332161 0.991359336 19 77 828 0.949494949 1.672097858 0.262626263 0.170731707 0.313131313 82 4 1 94 2L:6332079-6332185 6 PDZ-GEF FBtr0333242 6330837 6332789 GTACTT 6mer3-8 dme-miR-252-5p 2L + 6332056 6332201 3'utr PDZ-GEF FlyBase G1861.1 GCTGAATTCGAGAAAACAAAAACAAATCAAATCAAACGATATTGGATATGCTATATATGTATACATTGTGCTCTTTGTACTTTTAAGTTAGACTAAATACCAAATTTGCTTTTTAAGGCTTAAGAAAAACATTAGATCGAAGCCTA 58 6332121 0.990771662 22 55 562 0.975609756 1.903089987 0.158536585 0.310344828 0.512195122 58 2 0 80 2L:6332056-6332201 6 38 516 FBgn0265778 1055.34 20.3 30.87333333 0.036007353 1.871921182 1.230835673 -29 11 -9 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 6333148 6333154 - 2L_6333148_6333154_- 0.637975827 0.636136174 0.637056 0.001300794 Pez FBtr0331226|FBtr0079284 6332879|6332879 6333292|6333292 2L - 6333124 6333235 3'utr Pez FlyBase G8066.1 TTGTTTATATCGAACAAATTTCCTTTAGTTCTCGTTTTAAAAAATCAGTACAACTCCGTTCAGCAATTTTATATTTCTACTGGCAGCTGTTGTCCCTATAATCGTTAAATTT 483 6333155 0.990083965 23 458 4598 0.953982301 2.129528774 0.02300885 0.144927536 0.269026549 483 23 3 539 2L:6333124-6333235 7 Pez FBtr0331226|FBtr0079284 6332879|6332879 6333292|6333292 GGCAGCT 7mer-m8 dme-miR-980-3p 2L - 6333118 6333197 3'utr Pez FlyBase G6276.1 AAAAAATCAGTACAACTCCGTTCAGCAATTTTATATTTCTACTGGCAGCTGTTGTCCCTATAATCGTTAAATTTTAATAC 281 6333155 0.902582566 17 264 2648 0.93627451 2.104942108 0.046568627 0.341637011 0.546568627 281 24 2 382 2L:6333118-6333197 7 367 517 FBgn0031799 375.3333333 10.13666667 15.53333333 0.977797513 36.20519566 23.62660944 1 1 1 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 2L 6415192 6415199 + 2L_6415192_6415199_+ 0.639160033 0.638800384 0.638980209 0.000254276 CG13982 FBtr0079256 6414070 6415335 2L + 6415167 6415298 3'utr CG13982 FlyBase G2382.1 TTGTAAATTTTTAAGTTTAACTGATACCAAAGATTTATTTTGAAACTTGAATGTTACTCTCCATAGACTACATACTAGTATTTAAGTACGTTCACTATTTTCGCTGCACAGTAAATGTCATTTATTTGTGTC 115 6415191 0.903363832 21 113 864 0.984732824 2.11058971 0.022900763 0.113043478 0.221374046 115 2 0 129 2L:6415167-6415298 8 CG13982 FBtr0079256 6414070 6415335 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2L + 6415168 6415253 3'utr CG13982 FlyBase G1887.1 TGTAAATTTTTAAGTTTAACTGATACCAAAGATTTATTTTGAAACTTGAATGTTACTCTCCATAGACTACATACTAGTATTTAAGT 72 6415191 0.904059583 10 71 546 0.990291262 1.707570176 0 0.305555556 0.514563107 72 0 1 102 2L:6415168-6415253 8 80 518 FBgn0031811 23.7 1.106666667 1.73 3.375527426 72.28915663 46.24277457 1 1 1 0.2 dme-miR-283-5p 8mer-A1 TGATATTA 2L 6426138 6426145 + 2L_6426138_6426145_+ 0.421129504 0.426298667 0.423714086 0.003655176 Fic FBtr0079257 6426121 6426371 2L + 6426095 6426150 stop_codon Fic FlyBase G2390.1 CGAATCCGGATCTGGAGATCTACCGTGACCCATCTAGATGCATTGATATTAGACAA 27 6426136 0.722737755 9 27 167 1 1.491361694 0 0.148148148 0.258064516 27 0 0 31 2L:6426095-6426150 8 Fic FBtr0079257 6426121 6426371 TGATATTA 8mer-A1 dme-miR-283-5p 2L + 6426090 6426149 stop_codon Fic FlyBase G1891.1 TTCTACGAATCCGGATCTGGAGATCTACCGTGACCCATCTAGATGCATTGATATTAGACA 16 6426137 0.970407041 7 16 91 1 1.361727836 0.130434783 0.375 0.565217391 16 0 0 23 2L:6426090-6426149 8 14 519 FBgn0263278 143.1166667 8.97 13.60333333 0.09782229 1.560758082 1.02915952 2 1 1.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-m8 CTGTGAT 2L 6426260 6426266 + 2L_6426260_6426266_+ 0.661599258 0.661592475 0.661595867 4.81E-06 Fic FBtr0079257|FBtr0079257|FBtr0079257 6426121|6426121|6426121 6426371|6426371|6426371 2L + 6426243 6426308 3'utr Fic FlyBase G2392.1 AAAATAACGATGTAATTCTGTGATCATATTTAAGCTAAAAGACAACCAAAAAATGTACATAATGCA 237 6426259 0.854317163 13 218 1974 0.93220339 1.962211439 0.06440678 0.219409283 0.372881356 237 18 2 275 2L:6426243-6426308 7 Fic FBtr0079257|FBtr0079257|FBtr0079257 6426121|6426121|6426121 6426371|6426371|6426371 CTGTGAT 7mer-m8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 6426241 6426318 3'utr Fic FlyBase G1893.1 GAAAAATAACGATGTAATTCTGTGATCATATTTAAGCTAAAAGACAACCAAAAAATGTACATAATGCACAATCCAACT 151 6426258 0.933418858 14 139 1229 0.922018349 1.604226053 0.050458716 0.298013245 0.513761468 151 13 4 201 2L:6426241-6426318 7 174.5 520 FBgn0263278 143.1166667 8.97 13.60333333 1.219284966 19.45373467 12.8277383 1 2 1.5 0.2 dme-miR-283-5p 8mer-A1 TGATATTA 2L 6448480 6448487 - 2L_6448480_6448487_- 0.539052948 0.45936712 0.499210034 0.05634637 retm FBtr0339788 6448462 6449851 2L - 6448467 6448513 3'utr retm FlyBase G8125.1 AAACATTTTGTGAAAACATTGAATTGTGATATTAAAGAAAATTAAAC 46 6448490 0.69888334 6 44 372 0.963636364 1.423245874 0.272727273 0.152173913 0.290909091 46 1 1 53 2L:6448467-6448513 8 retm FBtr0339788 6448462 6449851 TGATATTA 8mer-A1 dme-miR-283-5p 2L - 6448467 6448509 3'utr retm FlyBase G6317.1 ATTTTGTGAAAACATTGAATTGTGATATTAAAGAAAATTAAAC 24 6448491 0.716369219 5 22 187 0.921052632 1.544068044 0.526315789 0.416666667 0.631578947 24 3 0 35 2L:6448467-6448509 8 34 521 FBgn0031814 365.7 13.12 20.05 0.092972382 2.591463415 1.695760599 3 4 3.5 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 2L 6449682 6449687 - 2L_6449682_6449687_- 0.999993838 0.999845689 0.999919764 0.000104723 retm FBtr0329951|FBtr0339788|FBtr0079272 6448804|6448462|6448804 6449707|6449851|6449851 2L - 6449615 6449702 3'utr retm FlyBase G8130.1 AAAGTGGTAATATCTTGTGTTTTAGTTGTCTTTAGTTGTTTAGCAGAATGTTAGTTTGATTTTAAATTGTATTTAGCTCAAATAGGCC 62 6449688 0.71880178 19 57 754 0.909090909 1.146128036 0.324675325 0.193548387 0.350649351 62 3 4 70 2L:6449615-6449702 6 retm FBtr0329951|FBtr0339788|FBtr0079272 6448804|6448462|6448804 6449707|6449851|6449851 TGTGTT 6mer3-8 dme-miR-317-3p 2L - 6449640 6449702 3'utr retm FlyBase G6323.1 AAAGTGGTAATATCTTGTGTTTTAGTTGTCTTTAGTTGTTTAGCAGAATGTTAGTTTGATTTT 47 6449688 0.995314682 8 41 596 0.888888889 0.954242509 0.320987654 0.468085106 0.691358025 47 2 7 72 2L:6449640-6449702 6 45.5 522 FBgn0031814 365.7 13.12 20.05 0.124418923 3.467987805 2.269326683 1 1 1 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 6468697 6468704 - 2L_6468697_6468704_- 0.493211122 0.375128603 0.434169863 0.083496936 mmy FBtr0079269|FBtr0079268|FBtr0339787 6468536|6468589|6468536 6468844|6468844|6468844 2L - 6468649 6468754 3'utr mmy FlyBase G8151.1 TTTATGATTCCCCAAACTGTAGTTAGTGCACGGAAATTCCATTGATTTCAGTACTTAAAGGAGACTTGTAAAAATTTGTTACCTATTGTGTCCGTTGATTTATTTT 30 6468712 0.818240221 15 30 265 1 1.556302501 0.305555556 0.166666667 0.305555556 30 0 0 36 2L:6468649-6468754 8 mmy FBtr0079268|FBtr0339787|FBtr0079269 6468589|6468536|6468536 6468844|6468844|6468844 GTACTTAA 8mer-A1 dme-miR-252-5p 2L - 6468656 6468751 3'utr mmy FlyBase G6333.1 ATGATTCCCCAAACTGTAGTTAGTGCACGGAAATTCCATTGATTTCAGTACTTAAAGGAGACTTGTAAAAATTTGTTACCTATTGTGTCCGTTGAT 33 6468713 0.836333334 12 32 237 0.976190476 1.612783857 0.142857143 0.272727273 0.428571429 33 1 0 41 2L:6468656-6468751 8 16.5 523 FBgn0259749 867.8133333 52.42 80.18333333 0.019013305 0.314765357 0.205778424 8 9 8.5 0.2 dme-miR-14-3p 7mer-A1 AGACTGA 2L 6468812 6468818 - 2L_6468812_6468818_- 0.746034273 0.676368195 0.711201234 0.049261372 mmy FBtr0079269|FBtr0079268|FBtr0339787 6468536|6468589|6468536 6468844|6468844|6468844 2L - 6468788 6468947 stop_codon mmy FlyBase G8152.1 CACCTACGCCGGCGAGAATCTCGCCTCGCATGTGGAGGGCAAGTCGTTCACCAGTCCCGTCTACCTGCGGGACAGCCGCGATCCCTTGCACGGACACCTTTAAGATGTAGGGGATCTGCATGGACGCATAGACTGATGGACGGATAGTAGTCGTTTCGAT 497 6468811 0.8549048 13 488 1787 0.982200647 2.306067436 0.283171521 0.197183099 0.354368932 497 9 2 607 2L:6468788-6468947 7 mmy FBtr0079268|FBtr0339787|FBtr0079269 6468589|6468536|6468536 6468844|6468844|6468844 AGACTGA 7mer-A1 dme-miR-14-3p 2L - 6468787 6468846 stop_codon mmy FlyBase G6334.1 AAGATGTAGGGGATCTGCATGGACGCATAGACTGATGGACGGATAGTAGTCGTTTCGATT 408 6468811 0.817033383 8 398 1449 0.979073244 2.214181309 0.255605381 0.455882353 0.668161435 408 11 3 655 2L:6468787-6468846 7 433 524 FBgn0259749 867.8133333 52.42 80.18333333 0.498955228 8.260206028 5.400124714 -7 -7 -7 0.2 dme-miR-999-3p 6mer3-8 AGTTAA 2L 6474464 6474469 - 2L_6474464_6474469_- 0.999997291 1 0.999998645 1.91E-06 CG9536 FBtr0303229|FBtr0079267 6474436|6474436 6474798|6474798 2L - 6474453 6474494 3'utr CG9536 FlyBase G8161.1 TGTAATTGAAAATGATGCTTTATTTAGTTAATAACTGTAAAT 44 6474474 0.688109184 9 39 472 0.901960784 1.361727836 0.137254902 0.159090909 0.274509804 44 4 1 46 2L:6474453-6474494 6 CG9536 FBtr0303229|FBtr0079267 6474436|6474436 6474798|6474798 AGTTAA 6mer3-8 dme-miR-999-3p 2L - 6474455 6474539 3'utr CG9536 FlyBase G6340.1 CTAGAGCCCTTACATAGATGCATACTTTCTGTTGTAGTCCTTACATGTAATTGAAAATGATGCTTTATTTAGTTAATAACTGTAA 45 6474472 0.807463949 17 36 465 0.788732394 0.84509804 0.267605634 0.422222222 0.633802817 45 8 7 56 2L:6474455-6474539 6 33 525 FBgn0031818 366.33 22.85 34.65666667 0.090082712 1.444201313 0.952197749 5 3 4 0.2 dme-miR-965-3p 7mer-m8 TACGCTT 2L 6474632 6474638 - 2L_6474632_6474638_- 0.580958139 0.592272834 0.586615486 0.008000701 CG9536 FBtr0303229|FBtr0079267 6474436|6474436 6474798|6474798 2L - 6474610 6474704 3'utr CG9536 FlyBase G8162.1 CGTACCCCCCATCAGTGTTCCCATTTTGTAATTACCGTTCGTGTGTTTCGTAGTGTCCTGTAGACTTACGCTTGCTTGCTGCGCACACCGCCGGC 44 6474639 0.985849807 16 41 374 0.921568627 1.194976603 0.254901961 0.136363636 0.254901961 44 2 2 47 2L:6474610-6474704 7 CG9536 FBtr0303229|FBtr0079267 6474436|6474436 6474798|6474798 TACGCTT 7mer-m8 dme-miR-965-3p 2L - 6474588 6474655 3'utr CG9536 FlyBase G6341.1 GTAGTGTCCTGTAGACTTACGCTTGCTTGCTGCGCACACCGCCGGCCATGCTGCTAGGAGCGGCGGAG 24 6474639 0.979784162 6 23 186 0.933333333 1.021189299 0.066666667 0.541666667 0.755555556 24 0 3 42 2L:6474588-6474655 7 25.5 526 FBgn0031818 366.33 22.85 34.65666667 0.069609369 1.115973742 0.73578917 1 1 1 0.2 dme-bantam-3p 6mer3-8 TGATCT 2L 6474746 6474751 - 2L_6474746_6474751_- 0.674985998 0.445901109 0.560443554 0.161987486 CG9536 FBtr0303229|FBtr0079267 6474436|6474436 6474798|6474798 2L - 6474710 6474774 3'utr CG9536 FlyBase G8163.1 TGAATTTTTGATATTTAAACGAATGATCTAATGATTTACGCCCATGTTTTGTATGATTCTGCATC 47 6474751 0.82828254 11 47 400 1 1.740362689 0.109090909 0.127659574 0.254545455 47 0 0 55 2L:6474710-6474774 6 CG9536 FBtr0303229|FBtr0079267 6474436|6474436 6474798|6474798 TGATCT 6mer3-8 dme-bantam-3p 2L - 6474662 6474783 3'utr CG9536 FlyBase G6342.1 ATATATTAATGAATTTTTGATATTTAAACGAATGATCTAATGATTTACGCCCATGTTTTGTATGATTCTGCATCAAGTACGTACCCCCCATCAGTGTTCCCATTTTGTAATTACCGTTCGTG 43 6474751 0.989597655 12 38 352 0.923076923 1.079181246 0.107692308 0.325581395 0.553846154 43 1 4 60 2L:6474662-6474783 6 28.5 527 FBgn0031818 366.33 22.85 34.65666667 0.077798706 1.24726477 0.822352602 0 0 0 0.2 dme-miR-1007-3p 8mer-A1 TGAGCTTA 2L 6496457 6496464 + 2L_6496457_6496464_+ 0.464777143 0.560400491 0.512588817 0.067615955 CG31638 FBtr0079262|FBtr0113411 6496064|6496119 6496988|6496988 2L + 6496441 6496492 3'utr CG31638 FlyBase G2447.1 GCTGGCCATATTCTTATGAGCTTAACCCGCAGCTAAGACGGTTGTTAGGAGG 15 6496451 0.779152902 4 14 102 0.9375 1.176091259 0.3125 0.066666667 0.125 15 1 0 15 2L:6496441-6496492 8 CG31638 FBtr0113411|FBtr0079262 6496119|6496064 6496988|6496988 TGAGCTTA 8mer-A1 dme-miR-1007-3p 2L + 6496441 6496472 3'utr CG31638 FlyBase G1929.1 GCTGGCCATATTCTTATGAGCTTAACCCGCAG 7 6496451 0.724868643 2 7 46 1 0.954242509 0.555555556 0.285714286 0.444444444 7 0 0 9 2L:6496441-6496472 8 9.5 528 FBgn0051638 490.34 20.43333333 31.29333333 0.019374312 0.464926591 0.303579037 6 6 6 0.2 dme-miR-263a-5p 6mer3-8 GTGCCA 2L 6496629 6496634 + 2L_6496629_6496634_+ 0.99347251 0.997237408 0.995354959 0.002662186 CG31638 FBtr0079262|FBtr0113411 6496064|6496119 6496988|6496988 2L + 6496612 6496639 3'utr CG31638 FlyBase G2449.1 TTGCGGAATAGCATTTAGTGCCAGAAAT 14 6496630 0.907088606 2 14 71 1 1.278753601 0.315789474 0.285714286 0.473684211 14 0 0 19 2L:6496612-6496639 6 CG31638 FBtr0113411|FBtr0079262 6496119|6496064 6496988|6496988 GTGCCA 6mer3-8 dme-miR-263a-5p 2L + 6496586 6496636 3'utr CG31638 FlyBase G1931.1 ATTGAAGCATAATACAGGTTCGATGTTTGCGGAATAGCATTTAGTGCCAGA 6 6496629 0.95297376 4 6 31 1 0.903089987 0.375 0.333333333 0.5 6 0 0 8 2L:6496586-6496636 6 9 529 FBgn0051638 490.34 20.43333333 31.29333333 0.018354611 0.44045677 0.287601193 -1 0 -0.5 0.2 dme-bantam-3p 6mer3-8 TGATCT 2L 6496814 6496819 + 2L_6496814_6496819_+ 0.999617136 0.992424497 0.996020816 0.005085936 CG31638 FBtr0079262|FBtr0113411 6496064|6496119 6496988|6496988 2L + 6496745 6496825 3'utr CG31638 FlyBase G2450.1 ATTTTTGCAGTTGCCTAGTCCGAAATTCTTTTAGTTTTTCAAAAGTCTATCGATATTCAGCGGCATAGTTGATCTTTTACA 30 6496821 0.977348276 9 28 235 0.928571429 1.290034611 0 0.3 0.5 30 2 1 39 2L:6496745-6496825 6 CG31638 FBtr0113411|FBtr0079262 6496119|6496064 6496988|6496988 TGATCT 6mer3-8 dme-bantam-3p 2L + 6496795 6496825 3'utr CG31638 FlyBase G1932.1 CGATATTCAGCGGCATAGTTGATCTTTTACA 21 6496821 0.634827359 4 20 154 0.911764706 1.491361694 0 0.380952381 0.617647059 21 3 0 31 2L:6496795-6496825 6 23 530 FBgn0051638 490.34 20.43333333 31.29333333 0.046906228 1.125611746 0.734980827 -7 -7 -7 0.2 dme-miR-965-3p 7mer-A1 ACGCTTA 2L 6564093 6564099 + 2L_6564093_6564099_+ 0.82122125 0.823349562 0.822285406 0.001505006 Ent2 FBtr0343158|FBtr0079290 6564072|6564072 6564709|6564396 2L + 6564077 6564117 3'utr Ent2 FlyBase G2469.1 TACATTTATTAGTATGACGCTTACTAACAATTTTCATTGTT 9 6564091 0.987977865 4 9 79 1 1 0 0.111111111 0.2 9 0 0 10 2L:6564077-6564117 7 Ent2 FBtr0343158|FBtr0079290 6564072|6564072 6564709|6564396 ACGCTTA 7mer-A1 dme-miR-965-3p 2L + 6564080 6564114 3'utr Ent2 FlyBase G1945.1 ATTTATTAGTATGACGCTTACTAACAATTTTCATT 6 6564091 0.674662479 3 6 54 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 2L:6564080-6564114 7 7 531 FBgn0263916 786.86 45.64666667 69.53333333 0.008896119 0.153351833 0.100671141 2 2 2 0.2 dme-miR-1008-3p 8mer-A1 AGCTGTGA 2L 6564580 6564587 - 2L_6564580_6564587_- 0.480513493 0.581109621 0.530811557 0.071132184 CG13766 FBtr0343161|FBtr0079330 6564110|6564361 6565169|6565169 2L - 6564544 6564608 3'utr CG13766 FlyBase G8188.1 TTATTTCATTCAATCGGATGAAGCTGTGATAAAACGAACCAAATATTCCATTGACTTGTTAGACC 21 6564590 0.77547647 8 19 137 0.916666667 1.041392685 0.083333333 0.095238095 0.208333333 21 1 1 22 2L:6564544-6564608 8 CG13766 FBtr0079330|FBtr0343161 6564361|6564110 6565169|6565169 AGCTGTGA 8mer-A1 dme-miR-1008-3p 2L - 6564540 6564609 3'utr CG13766 FlyBase G6370.1 GTTATTTCATTCAATCGGATGAAGCTGTGATAAAACGAACCAAATATTCCATTGACTTGTTAGACCCCCT 24 6564590 0.862002143 7 17 119 0.625 0.920818754 0.3 0.458333333 0.675 24 13 2 25 2L:6564540-6564609 8 15.5 532 FBgn0031834 61.51666667 4.113333333 6.276666667 0.251964237 3.768233387 2.469463622 3 3 3 0.2 dme-bantam-3p 6mer3-8 TGATCT 2L 6616826 6616831 + 2L_6616826_6616831_+ 0.665890232 0.628671562 0.647280897 0.026317524 CG11050 FBtr0079291|FBtr0079293|FBtr0079292 6616512|6616512|6616512 6617117|6617117|6617117 2L + 6616785 6616890 3'utr CG11050 FlyBase G2486.1 AAGCGTAAAGTTGCGGATCGAATTCTATCGATATATTCAATTGATCTGACTAAGGAATCCAATTGTAAATAACTTAAACGAATTGTAGACTATTTAGAAAAAAATT 152 6616825 0.87082934 20 145 1160 0.957219251 1.65079304 0.07486631 0.210526316 0.35828877 152 5 3 179 2L:6616785-6616890 6 CG11050 FBtr0079292|FBtr0079293|FBtr0079291 6616512|6616512|6616512 6617117|6617117|6617117 TGATCT 6mer3-8 dme-bantam-3p 2L + 6616808 6616893 3'utr CG11050 FlyBase G1965.1 TCTATCGATATATTCAATTGATCTGACTAAGGAATCCAATTGTAAATAACTTAAACGAATTGTAGACTATTTAGAAAAAAATTATT 99 6616825 0.927291471 8 95 772 0.97260274 2.152288344 0.061643836 0.373737374 0.575342466 99 4 0 142 2L:6616808-6616893 6 85.5 533 FBgn0031836 528.79 32.3 48.86333333 0.161689896 2.647058824 1.749778293 1 1 1 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 6633068 6633075 - 2L_6633068_6633075_- 0.490735387 0.470860811 0.480798099 0.014053464 CG31635 FBtr0331191|FBtr0331187 6632796|6632796 6634810|6634810 2L - 6633006 6633125 3'utr CG31635 FlyBase G8197.1 TGTTTCAACGTATCTTCATCAGTTAAGTGGAATTACTTAAAAAATGTACTGTACTTAATTTACAAATAGTTGATATTTCTGGTGCTTACCGGTCGCTAGAAGTTTGCCTTAAACTAGATC 79 6633076 0.790901547 18 76 710 0.966666667 1.939519253 0.088888889 0.139240506 0.244444444 79 3 0 87 2L:6633006-6633125 8 CG31635 FBtr0331187|FBtr0331191 6632796|6632796 6634810|6634810 GTACTTAA 8mer-A1 dme-miR-252-5p 2L - 6632999 6633091 3'utr CG31635 FlyBase G6376.1 ACTTAAAAAATGTACTGTACTTAATTTACAAATAGTTGATATTTCTGGTGCTTACCGGTCGCTAGAAGTTTGCCTTAAACTAGATCCCCGTTT 38 6633076 0.989174555 5 36 344 0.965517241 1.447158031 0.034482759 0.394736842 0.603448276 38 1 1 56 2L:6632999-6633091 8 44 534 FBgn0051635 607.7033333 10.19333333 15.53666667 0.07240375 4.316546763 2.832010298 1 1 1 0.2 dme-bantam-3p 8mer-A1 TGATCTCA 2L 6633661 6633668 - 2L_6633661_6633668_- 0.614603986 0.599630696 0.607117341 0.010587722 CG31635 FBtr0331191|FBtr0331187 6632796|6632796 6634810|6634810 2L - 6633592 6633723 3'utr CG31635 FlyBase G8200.1 TTAACAACGGAAATGAAGCGCAAACGAAAACAAAAGTACCCAAAATAAATCCAATTGATCTCATTATGTGATATTTGTCGTAGTGCCCAAAGCGTTCACTGTACGTGTATCTATAACCAAACCATACCATAT 484 6633669 0.989510946 23 450 4377 0.931389365 2.035829825 0.015437393 0.17768595 0.317324185 484 36 4 543 2L:6633592-6633723 8 CG31635 FBtr0331187|FBtr0331191 6632796|6632796 6634810|6634810 TGATCTCA 8mer-A1 dme-bantam-3p 2L - 6633542 6633721 3'utr CG31635 FlyBase G6379.1 AACAACGGAAATGAAGCGCAAACGAAAACAAAAGTACCCAAAATAAATCCAATTGATCTCATTATGTGATATTTGTCGTAGTGCCCAAAGCGTTCACTGTACGTGTATCTATAACCAAACCATACCATATGAGTTAAGTACAGGGTGTGTACATTCGAACACTTTTGCTCTAAGTAAACT 369 6633669 0.987791287 26 340 3224 0.919847328 1.984077034 0.04389313 0.319783198 0.520992366 369 38 4 482 2L:6633542-6633721 8 394.5 535 FBgn0051635 607.7033333 10.19333333 15.53666667 0.649165437 38.70176586 25.39154688 1 1 1 0.2 dme-miR-252-5p 7mer-m8 GTACTTA 2L 6634160 6634166 - 2L_6634160_6634166_- 0.585089473 0.587418955 0.586254214 0.001647205 CG31635 FBtr0331191|FBtr0331187 6632796|6632796 6634810|6634810 2L - 6634134 6634185 3'utr CG31635 FlyBase G8202.1 TCGTGTGGATGAAAAATTTGTACTTACCGATTCAAATGAATACTTACTGAAA 14 6634167 0.986717499 4 13 106 0.9375 1.176091259 0.6875 0.071428571 0.1875 14 1 0 15 2L:6634134-6634185 7 CG31635 FBtr0331187|FBtr0331191 6632796|6632796 6634810|6634810 GTACTTA 7mer-m8 dme-miR-252-5p 2L - 6634147 6634184 3'utr CG31635 FlyBase G6381.1 CGTGTGGATGAAAAATTTGTACTTACCGATTCAAATGA 11 6634167 0.70245094 3 11 86 1 1.230448921 0.294117647 0.454545455 0.647058824 11 0 0 17 2L:6634147-6634184 7 11.5 536 FBgn0051635 607.7033333 10.19333333 15.53666667 0.018923707 1.128188358 0.74018451 1 1 1 0.2 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 6635598 6635605 - 2L_6635598_6635605_- 0.619309775 0.616962566 0.61813617 0.001659721 CG31635 FBtr0079326|FBtr0331188|FBtr0331189|FBtr0331190 6635543|6635543|6635543|6635543 6635647|6635647|6635647|6635647 2L - 6635560 6635624 5'utr CG31635 FlyBase G8204.1 TATATACAAAGGGGATAATTCTAGTCATAAAGGAACCATAATATTTGAAGAATTCTCTATAAATG 125 6635606 0.700874894 8 121 720 0.950704225 1.653212514 0.232394366 0.112 0.218309859 125 5 2 135 2L:6635560-6635624 8 CG31635 FBtr0331188|FBtr0079326|FBtr0331190|FBtr0331189 6635543|6635543|6635543|6635543 6635647|6635647|6635647|6635647 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 6635564 6635619 5'utr CG31635 FlyBase G6382.1 ACAAAGGGGATAATTCTAGTCATAAAGGAACCATAATATTTGAAGAATTCTCTATA 52 6635606 0.973309407 6 47 288 0.915492958 1.210853365 0.197183099 0.346153846 0.521126761 52 3 3 65 2L:6635564-6635619 8 85.5 537 FBgn0051635 607.7033333 10.19333333 15.53666667 0.14069365 8.387835186 5.50311092 1 1 1 0.2 dme-miR-317-3p 8mer-A1 TGTGTTCA 2L 6661963 6661970 + 2L_6661963_6661970_+ 0.630802418 0.629817937 0.630310177 0.000696147 CG11070 FBtr0079297 6661698 6662033 2L + 6661921 6661994 3'utr CG11070 FlyBase G2512.1 AATAACATGCAAAGGATAAATTATTGTAGTCATATTTGGTTTTGTGTTCACAATATGTTTACATATATGTTTAA 29 6661962 0.992589672 8 28 324 0.970588235 1.217483944 0.058823529 0.137931034 0.264705882 29 0 1 33 2L:6661921-6661994 8 CG11070 FBtr0079297 6661698 6662033 TGTGTTCA 8mer-A1 dme-miR-317-3p 2L + 6661921 6661994 3'utr CG11070 FlyBase G1988.1 AATAACATGCAAAGGATAAATTATTGTAGTCATATTTGGTTTTGTGTTCACAATATGTTTACATATATGTTTAA 21 6661962 0.957462311 4 20 220 0.944444444 1.531478917 0.111111111 0.571428571 0.75 21 2 0 34 2L:6661921-6661994 8 21 538 FBgn0028467 522.98 18.67666667 28.61666667 0.040154499 1.124397644 0.73383809 1 1 1 0.2 dme-miR-317-3p 8mer-A1 TGTGTTCA 2L 6674670 6674677 + 2L_6674670_6674677_+ 0.577262409 0.500350553 0.538806481 0.054384855 CG34310 FBtr0346453|FBtr0333516 6674524|6674524 6674780|6674780 2L + 6674496 6674706 stop_codon CG34310 FlyBase G2535.1 GAGTCAAGACCCAAACGGAGCGAATATTGAGCCAAGGCTGCCAGTGCCGTCATAGACATCTTTACATACTTATAGCCTAGTGATTAGTTACCAAATTTCAACGCTGTAACATGGTGAACAATGAATGGACTTTTACTTTCTTACCTTCACTTTGGGTGGAGAGGCCCATCTTCTTGTGTTCATTTTAGAGTTAAACAGAATGGATTTTTTA 157 6674669 0.988137635 25 145 1320 0.934065934 1.62838893 0.065934066 0.133757962 0.252747253 157 9 3 170 2L:6674496-6674706 8 CG34310 FBtr0333516|FBtr0346453 6674524|6674524 6674780|6674780 TGTGTTCA 8mer-A1 dme-miR-317-3p 2L + 6674644 6674696 3'utr CG34310 FlyBase G2004.2 ACTTTGGGTGGAGAGGCCCATCTTCTTGTGTTCATTTTAGAGTTAAACAGAAT 44 6674669 0.675670051 8 42 479 0.944444444 1.707570176 0.092592593 0.204545455 0.351851852 44 3 0 51 2L:6674644-6674696 8 46 539 FBgn0085339 513.3133333 76.24666667 117.4333333 0.089613881 0.603305063 0.391711609 1 1 1 0.2 dme-miR-79-3p 7mer-m8 TAGCTTT 2L 6678077 6678083 - 2L_6678077_6678083_- 0.619258836 0.536088339 0.577673588 0.058810425 Nhe3 FBtr0300327|FBtr0273247|FBtr0273248|FBtr0333348|FBtr0273250 6677833|6677833|6677833|6677833|6677833 6678146|6679193|6678723|6679064|6678723 2L - 6678064 6678097 3'utr Nhe3 FlyBase G8245.1 ACAACATAAACTTATAGCTTTTTCGTTCTAAGCC 16 6678076 0.625529767 4 15 148 0.954545455 1.322219295 0 0.375 0.545454545 16 1 0 21 2L:6678064-6678097 7 Nhe3 FBtr0273250|FBtr0300327|FBtr0273247|FBtr0273248|FBtr0333348 6677833|6677833|6677833|6677833|6677833 6678723|6678146|6679193|6678723|6679064 TAGCTTT 7mer-m8 dme-miR-79-3p 2L - 6678049 6678095 3'utr Nhe3 FlyBase G6412.1 AACATAAACTTATAGCTTTTTCGTTCTAAGCCAGTTAGTGTAAATAT 12 6678076 0.963675839 3 11 113 0.842105263 1.204119983 0 0.416666667 0.631578947 12 3 0 16 2L:6678049-6678095 7 13 540 FBgn0028703 495.63 20.01 30.39666667 0.026229244 0.649675162 0.427678474 -7 -7 -7 0.2 dme-miR-932-5p 6mer2-7 GAATTG 2L 6678682 6678687 - 2L_6678682_6678687_- 0.885125708 0.936396758 0.910761233 0.036254142 Nhe3 FBtr0273247|FBtr0273248|FBtr0273250 6677833|6677833|6677833 6679193|6678723|6678723 2L - 6678624 6678702 3'utr Nhe3 FlyBase G8247.2 CTTTTGTTATTTATTGAATTGGTCTCAACTGAAATCGAAAATGTGAAAACTGTACAAATTAGAATATTACTTTTCAGTT 259 6678684 0.724330692 19 240 2028 0.93015873 1.68871637 0.174603175 0.181467181 0.326984127 259 17 5 293 2L:6678624-6678702 6 Nhe3 FBtr0273250|FBtr0273247|FBtr0273248 6677833|6677833|6677833 6678723|6679193|6678723 GAATTG 6mer2-7 dme-miR-932-5p 2L - 6678630 6678709 3'utr Nhe3 FlyBase G6416.1 TAGTTTTCTTTTGTTATTTATTGAATTGGTCTCAACTGAAATCGAAAATGTGAAAACTGTACAAATTAGAATATTACTTT 182 6678684 0.722392589 16 177 1385 0.97080292 2.123851641 0.142335766 0.357142857 0.572992701 182 7 1 266 2L:6678630-6678709 6 159 541 FBgn0028703 495.63 20.01 30.39666667 0.320803825 7.946026987 5.230836715 -3 -3 -3 0.2 dme-miR-8-3p 6mer3-8 CAGTAT 2L 6679652 6679657 - 2L_6679652_6679657_- 0.998885284 0.997301559 0.998093421 0.001119845 Nhe3 FBtr0333347 6679319 6679922 2L - 6679631 6679707 3'utr Nhe3 FlyBase G8249.1 AATGTTAAATTTTGTGGTATAAGCGGAAGTGATGGATAAGTTACACCCTTCAGTATGGTTGACTAATTGTTTAAGTT 21 6679658 0.793852309 9 18 171 0.869565217 1.301029996 0.173913043 0.095238095 0.173913043 21 3 0 20 2L:6679631-6679707 6 Nhe3 FBtr0333347 6679319 6679922 CAGTAT 6mer3-8 dme-miR-8-3p 2L - 6679637 6679671 3'utr Nhe3 FlyBase G6418.1 TAAGTTACACCCTTCAGTATGGTTGACTAATTGTT 22 6679659 0.795544405 5 21 166 0.967741935 1.477121255 0.258064516 0.318181818 0.516129032 22 1 0 30 2L:6679637-6679671 6 17.5 542 FBgn0028703 495.63 20.01 30.39666667 0.035308597 0.874562719 0.575721022 1 2 1.5 0.2 dme-miR-932-5p 6mer2-7 GAATTG 2L 6679758 6679763 - 2L_6679758_6679763_- 0.703666021 0.949789011 0.826727516 0.174035242 Nhe3 FBtr0333347 6679319 6679922 2L - 6679745 6679810 3'utr Nhe3 FlyBase G8250.1 TGAATCTACACCACAGAGACTTTGGCAAAGTAGACGTATTATTGTATGAATTGGCCGTGAAAATGT 59 6679759 0.790946292 8 59 311 1 1.875061263 0.08 0.237288136 0.4 59 0 0 75 2L:6679745-6679810 6 Nhe3 FBtr0333347 6679319 6679922 GAATTG 6mer2-7 dme-miR-932-5p 2L - 6679745 6679807 3'utr Nhe3 FlyBase G6419.1 ATCTACACCACAGAGACTTTGGCAAAGTAGACGTATTATTGTATGAATTGGCCGTGAAAATGT 36 6679759 0.750003471 7 35 176 1 1.662757832 0.065217391 0.25 0.413043478 36 0 0 46 2L:6679745-6679807 6 31 543 FBgn0028703 495.63 20.01 30.39666667 0.062546658 1.549225387 1.019848668 -4 -4 -4 0.2 dme-miR-318-3p 6mer3-8 CCCAGT 2L 6720349 6720354 - 2L_6720349_6720354_- 0.96195934 0.984379851 0.973169595 0.015853758 homer FBtr0329892|FBtr0333346|FBtr0079307 6719392|6719894|6719894 6721023|6721023|6721023 2L - 6720304 6720370 3'utr homer FlyBase G8262.1 TGAATGTATACCTATGCCCAGTATTTCGTCAAAATTCTTCGAGTCCTTGTGACACTGATGTAGGTCC 15 6720356 0.984437746 7 15 121 1 1.278753601 0 0.2 0.368421053 15 0 0 19 2L:6720304-6720370 6 homer FBtr0079307|FBtr0333346|FBtr0329892 6719894|6719894|6719392 6721023|6721023|6721023 CCCAGT 6mer3-8 dme-miR-318-3p 2L - 6720306 6720372 3'utr homer FlyBase G6429.1 ATTGAATGTATACCTATGCCCAGTATTTCGTCAAAATTCTTCGAGTCCTTGTGACACTGATGTAGGT 11 6720357 0.985145773 7 11 95 1 1.322219295 0 0.545454545 0.761904762 11 0 0 21 2L:6720306-6720372 6 10 544 FBgn0025777 829.61 37.73333333 57.58 0.012053857 0.265017668 0.173671414 2 3 2.5 0.2 dme-miR-252-5p 7mer-m8 GTACTTA 2L 6731985 6731991 + 2L_6731985_6731991_+ 0.500230817 0.510371444 0.505301131 0.007170487 Liprin-alpha FBtr0329941 6730687 6732766 2L + 6731974 6732012 3'utr Liprin-alpha FlyBase G2564.1 AAGTTTTGCATGTACTTACTTTCCCTTTATACGTTAAAG 15 6731984 0.930055824 2 15 169 1 1.230448921 0.058823529 0.133333333 0.235294118 15 0 0 17 2L:6731974-6732012 7 Liprin-alpha FBtr0329941 6730687 6732766 GTACTTA 7mer-m8 dme-miR-252-5p 2L + 6731971 6732008 3'utr Liprin-alpha FlyBase G2023.1 TTTAAGTTTTGCATGTACTTACTTTCCCTTTATACGTT 15 6731984 0.811510161 3 14 165 0.9 1.255272505 0 0.266666667 0.45 15 2 0 18 2L:6731971-6732008 7 15 545 FBgn0046704 1858.986667 39.04 59.95333333 0.008068912 0.384221311 0.250194596 1 1 1 0.2 dme-miR-965-3p 6mer2-7 ACGCTT 2L 6732131 6732136 + 2L_6732131_6732136_+ 0.999991058 0.838849488 0.919420273 0.113944318 Liprin-alpha FBtr0329941 6730687 6732766 2L + 6732103 6732144 3'utr Liprin-alpha FlyBase G2565.1 TGTGTACAAAAAACCAAAATTGCAACTAACGCTTGTCCTTAA 6 6732128 0.984046085 4 5 41 0.857142857 0.77815125 0.285714286 0.166666667 0.285714286 6 1 0 6 2L:6732103-6732144 6 Liprin-alpha FBtr0329941 6730687 6732766 ACGCTT 6mer2-7 dme-miR-965-3p 2L + 6732117 6732148 3'utr Liprin-alpha FlyBase G2024.1 CAAAATTGCAACTAACGCTTGTCCTTAAGTTG 5 6732129 0.896368235 2 5 36 1 0.903089987 0.125 0.4 0.625 5 0 0 8 2L:6732117-6732148 6 5.5 546 FBgn0046704 1858.986667 39.04 59.95333333 0.002958601 0.140881148 0.091738018 3 2 2.5 0.2 dme-bantam-3p 6mer3-8 TGATCT 2L 6778791 6778796 - 2L_6778791_6778796_- 0.979978973 0.988796376 0.984387674 0.006234843 nrv1 FBtr0079384 6778553 6779372 2L - 6778772 6778815 3'utr nrv1 FlyBase G8266.1 CATGGAGAACGAAACATTTTGATCTAAGCTGAATGTCGATTATT 41 6778797 0.656066173 7 38 280 0.936170213 1.643452676 0.234042553 0.12195122 0.234042553 41 3 0 44 2L:6778772-6778815 6 nrv1 FBtr0079384 6778553 6779372 TGATCT 6mer3-8 dme-bantam-3p 2L - 6778772 6778814 3'utr nrv1 FlyBase G6432.1 ATGGAGAACGAAACATTTTGATCTAAGCTGAATGTCGATTATT 32 6778797 0.633711496 8 30 216 0.923076923 1.681241237 0.307692308 0.53125 0.711538462 32 4 0 48 2L:6778772-6778814 6 36 547 FBgn0015776 3384.113333 195.7933333 300.12 0.010637942 0.183867343 0.119952019 1 1 1 0.2 dme-miR-305-5p 7mer-A1 GTACAAA 2L 6778857 6778863 - 2L_6778857_6778863_- 0.781255789 0.781737268 0.781496528 0.000340472 nrv1 FBtr0332370|FBtr0079384 6778822|6778553 6779372|6779372 2L - 6778837 6778966 3'utr nrv1 FlyBase G8267.1 GATCATTATTTTCTGTCAGTTGTATTTAGTTTTAATTTATAAATGTTGAAACATGCCCGAAAAATTCTTTGTTTCCCGCACATCGCCTAGGCTTGTTCAATTTGTACAAAGAAGCAACTAAATAAATTAT 76 6778865 0.994659181 15 75 482 0.989583333 1.977723605 0.354166667 0.210526316 0.375 76 1 0 95 2L:6778837-6778966 7 nrv1 FBtr0332370|FBtr0079384 6778822|6778553 6779372|6779372 GTACAAA 7mer-A1 dme-miR-305-5p 2L - 6778844 6778927 3'utr nrv1 FlyBase G6433.1 TAAATGTTGAAACATGCCCGAAAAATTCTTTGTTTCCCGCACATCGCCTAGGCTTGTTCAATTTGTACAAAGAAGCAACTAAAT 59 6778865 0.987244447 7 58 353 0.9875 1.897627091 0.1875 0.271186441 0.4625 59 1 0 79 2L:6778844-6778927 7 34.5 548 FBgn0015776 3384.113333 195.7933333 300.12 0.010194694 0.176206204 0.114954018 2 2 2 0.2 dme-miR-305-5p 8mer-A1 AGTACAAA 2L 6906875 6906882 - 2L_6906875_6906882_- 0.589689224 0.601105794 0.595397509 0.008072755 CG13773 FBtr0079372 6906664 6906917 2L - 6906862 6906910 3'utr CG13773 FlyBase G8287.1 ACCTTTCGTTTTTAACATCTCTGTATATAGTACAAATTAACAATTACAT 46 6906885 0.781638653 6 45 438 0.980392157 1.397940009 0.098039216 0.086956522 0.176470588 46 0 1 50 2L:6906862-6906910 8 CG13773 FBtr0079372 6906664 6906917 AGTACAAA 8mer-A1 dme-miR-305-5p 2L - 6906870 6906908 3'utr CG13773 FlyBase G6451.1 CTTTCGTTTTTAACATCTCTGTATATAGTACAAATTAAC 14 6906885 0.726582326 5 12 129 0.909090909 1 0 0.428571429 0.636363636 14 1 1 20 2L:6906870-6906908 8 30 549 FBgn0042092 166.9866667 19.41666667 29.97666667 0.179655062 1.545064378 1.000778383 3 3 3 0.2 dme-miR-8-3p 6mer2-7 AGTATT 2L 6911429 6911434 - 2L_6911429_6911434_- 0.999999933 0.999999461 0.999999697 2.83E-07 Wee1 FBtr0332329|FBtr0079371 6911088|6911341 6911700|6911700 2L - 6911390 6911465 3'utr Wee1 FlyBase G8291.1 TAAACTTTAAGATTCTCGCATAGTTGTAATGAGTATTGTTTTCGAAATTAAAATATTTATTATGTTACATGGAAAT 11 6911432 0.986513279 8 11 96 1 1.176091259 0.133333333 0.272727273 0.466666667 11 0 0 15 2L:6911390-6911465 6 Wee1 FBtr0332329|FBtr0079371 6911088|6911341 6911700|6911700 AGTATT 6mer2-7 dme-miR-8-3p 2L - 6911413 6911448 3'utr Wee1 FlyBase G6455.1 GCATAGTTGTAATGAGTATTGTTTTCGAAATTAAAA 7 6911429 0.951315344 4 6 62 1 1 0.2 0.428571429 0.6 7 0 0 10 2L:6911413-6911448 6 6 550 FBgn0011737 492.04 24.44666667 37.58666667 0.012194131 0.245432233 0.159631075 -2 -5 -3.5 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 2L 6911628 6911633 - 2L_6911628_6911633_- 0.978863102 0.98118009 0.980021596 0.001638366 Wee1 FBtr0332329|FBtr0079371 6911088|6911341 6911700|6911700 2L - 6911609 6911700 3'utr Wee1 FlyBase G8293.1 TAAGCTCGCAACAGATGCCGAACCGATAGCTAAACTCTTCCGAATCGAACGTGAACTAAGCTCACATTGTGTTACCTTTTAAGCGTATTCAT 95 6911633 0.98104352 11 93 633 0.98245614 2.049218023 0.140350877 0.178947368 0.315789474 95 2 0 112 2L:6911609-6911700 6 Wee1 FBtr0332329|FBtr0079371 6911088|6911341 6911700|6911700 TGTGTT 6mer3-8 dme-miR-317-3p 2L - 6911608 6911708 stop_codon Wee1 FlyBase G6456.1 ATATCTGATAAGCTCGCAACAGATGCCGAACCGATAGCTAAACTCTTCCGAATCGAACGTGAACTAAGCTCACATTGTGTTACCTTTTAAGCGTATTCATA 53 6911634 0.962293907 9 52 361 0.977272727 1.934498451 0.284090909 0.433962264 0.659090909 53 2 0 86 2L:6911608-6911708 6 43.5 551 FBgn0011737 492.04 24.44666667 37.58666667 0.088407447 1.779383692 1.157325293 0 1 0.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 6914654 6914661 - 2L_6914654_6914661_- 0.631132712 0.631005642 0.631069177 8.99E-05 x16 FBtr0079368|FBtr0332328 6914379|6914299 6915042|6915042 2L - 6914548 6914677 3'utr x16 FlyBase G8311.1 AGCCGCAGATTAACGATCTAGTCAGGATTGCTATGTAAATTGATTTGCCTTGGATTTTATTTTGCTTACCCTGGAATTATACTCGAATGTGCAGAGGACGAAGCATCGCCACCATTTTCATGTCAATTTT 31 6914661 0.934813068 10 29 222 0.941176471 1.204119983 0.205882353 0.096774194 0.176470588 31 1 1 32 2L:6914548-6914677 8 x16 FBtr0079368|FBtr0332328 6914379|6914299 6915042|6915042 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 6914622 6914703 3'utr x16 FlyBase G6467.1 AATTTAAGATATAGAAATGTATCGGCAGCCGCAGATTAACGATCTAGTCAGGATTGCTATGTAAATTGATTTGCCTTGGATT 28 6914667 0.972373818 9 27 162 0.977272727 1.633468456 0.318181818 0.464285714 0.659090909 28 1 0 43 2L:6914622-6914703 8 21 552 FBgn0028554 1073.163333 75.76666667 116.1166667 0.019568317 0.27716674 0.180852591 0 6 3 0.2 dme-miR-277-3p 6mer3-8 TGCATT 2L 6943939 6943944 - 2L_6943939_6943944_- 0.997389478 0.999962864 0.998676171 0.001819669 Fgop2 FBtr0079366|FBtr0332325 6943738|6943176 6944048|6944048 2L - 6943899 6943968 3'utr Fgop2 FlyBase G8332.1 CGCACGAAGAGGGCCCACATAACCTGCATTAGCTCTTAGCGATTGATAATCTCTAAGTAATTTATACATA 19 6943949 0.961067937 6 18 96 0.92 1.361727836 0.28 0.263157895 0.44 19 2 0 23 2L:6943899-6943968 6 Fgop2 FBtr0332325|FBtr0079366 6943176|6943738 6944048|6944048 TGCATT 6mer3-8 dme-miR-277-3p 2L - 6943911 6943963 3'utr Fgop2 FlyBase G6485.1 GAAGAGGGCCCACATAACCTGCATTAGCTCTTAGCGATTGATAATCTCTAAGT 13 6943940 0.974597509 3 12 79 0.882352941 1.176091259 0.176470588 0.230769231 0.411764706 13 2 0 15 2L:6943911-6943963 6 14.5 553 FBgn0031871 525 42.17 64.62333333 0.027619048 0.343846336 0.22437716 5 -4 0.5 0.2 dme-miR-276a-3p 6mer2-7 GTTCCT 2L 6954423 6954428 - 2L_6954423_6954428_- 0.538325058 0.588648612 0.563486835 0.035584088 CG13775 FBtr0343775 6954355 6954584 2L - 6954402 6954442 3'utr CG13775 FlyBase G8347.1 ATCAGGATCATTGTGTTCCTCTTCGTCTTCCTCCTCCTCCT 10 6954432 0.79288534 2 10 100 1 1.113943352 0 0.2 0.384615385 10 0 0 13 2L:6954402-6954442 6 CG13775 FBtr0343775 6954355 6954584 GTTCCT 6mer2-7 dme-miR-276a-3p 2L - 6954402 6954442 3'utr CG13775 FlyBase G6497.1 ATCAGGATCATTGTGTTCCTCTTCGTCTTCCTCCTCCTCCT 9 6954432 0.799558189 3 9 101 1 1.079181246 0 0.333333333 0.5 9 0 0 12 2L:6954402-6954442 6 9.5 554 FBgn0031874 57.8 3.896666667 5.98 0.164359862 2.43798118 1.588628763 4 4 4 0.2 dme-miR-31a-5p 6mer2-7 CTTGCC 2L 6959136 6959141 - 2L_6959136_6959141_- 0.969168594 0.735200967 0.85218478 0.165440077 Atac1 FBtr0079362 6959097 6959182 2L - 6959117 6959164 3'utr Atac1 FlyBase G8351.1 TACTTGAGTACTAAATTACTAGACTTGCCTGTAAAGCTACAAATTAAA 30 6959145 0.761542278 10 27 207 0.916666667 1.217483944 0.166666667 0.2 0.333333333 30 2 1 33 2L:6959117-6959164 6 Atac1 FBtr0079362 6959097 6959182 CTTGCC 6mer2-7 dme-miR-31a-5p 2L - 6959107 6959159 3'utr Atac1 FlyBase G6500.1 GAGTACTAAATTACTAGACTTGCCTGTAAAGCTACAAATTAAATATAAAGAGA 15 6959146 0.824867079 4 12 99 0.842105263 0.903089987 0.263157895 0.2 0.368421053 15 2 1 16 2L:6959107-6959159 6 21 555 FBgn0031876 128 12.98 19.96333333 0.1640625 1.617873652 1.051928536 4 5 4.5 0.2 dme-miR-305-5p 7mer-m8 AGTACAA 2L 6966868 6966874 - 2L_6966868_6966874_- 0.642991279 0.642824369 0.642907824 0.000118016 smt3 FBtr0079356|FBtr0346716 6966778|6966778 6967027|6967027 2L - 6966844 6966944 3'utr smt3 FlyBase G8372.2 CAAAAACACAACAACAACAACATGAAGAATCCAACAAACCAGGCCCTAAGAATCGATTGAATATGCTTTTAGTACAACTGTAGATTCTAAATGCGTCTGTG 79 6966876 0.987768481 17 75 701 0.955555556 1.633468456 0.177777778 0.139240506 0.244444444 79 3 1 86 2L:6966844-6966944 7 smt3 FBtr0079356|FBtr0346716 6966778|6966778 6967027|6967027 AGTACAA 7mer-m8 dme-miR-305-5p 2L - 6966850 6966944 3'utr smt3 FlyBase G6514.2 CAAAAACACAACAACAACAACATGAAGAATCCAACAAACCAGGCCCTAAGAATCGATTGAATATGCTTTTAGTACAACTGTAGATTCTAAATGCG 50 6966876 0.984249376 13 47 386 0.948051948 1.86332286 0.337662338 0.34 0.571428571 50 4 0 73 2L:6966850-6966944 7 55 556 FBgn0264922 12150.86667 2306.473333 3557.52 0.004526426 0.023845929 0.015460208 2 2 2 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 2L 7030904 7030909 - 2L_7030904_7030909_- 0.976718592 0.979313901 0.978016246 0.001835154 Rab30 FBtr0079428|FBtr0079426|FBtr0079427 7030491|7030491|7030491 7031433|7031433|7031433 2L - 7030883 7030956 3'utr Rab30 FlyBase G8407.1 AGATCCTATGGGAAACTAGCTGTCAATGACTAAGGATGCTAAATATTTGTGTTACAAGAACTCCATTGGAGGTG 90 7030911 0.821874347 9 83 693 0.935185185 1.703291378 0.333333333 0.177777778 0.314814815 90 6 1 101 2L:7030883-7030956 6 Rab30 FBtr0079427|FBtr0079426|FBtr0079428 7030491|7030491|7030491 7031433|7031433|7031433 TGTGTT 6mer3-8 dme-miR-317-3p 2L - 7030823 7030956 3'utr Rab30 FlyBase G6535.2 AGATCCTATGGGAAACTAGCTGTCAATGACTAAGGATGCTAAATATTTGTGTTACAAGAACTCCATTGGAGGTGTTTAAGACCGCCTGATTTTCTTGATTTGTATTATATAGACGTATGTATTGATCTGATTAT 83 7030911 0.946101567 15 79 662 0.959677419 2.075546961 0.403225806 0.313253012 0.540322581 83 5 0 119 2L:7030823-7030956 6 67 557 FBgn0031882 194.3333333 12.53666667 18.90666667 0.344768439 5.344323318 3.543723554 2 2 2 0.2 dme-miR-980-3p 7mer-A1 GCAGCTA 2L 7031105 7031111 - 2L_7031105_7031111_- 0.819851899 0.822198733 0.821025316 0.001659438 Rab30 FBtr0079428|FBtr0079426|FBtr0079427 7030491|7030491|7030491 7031433|7031433|7031433 2L - 7031079 7031152 3'utr Rab30 FlyBase G8408.2 AAACATTTAAAGTACAATGTGCAAACGGATCTGGAAACTGTGCAGCTAATCTGTTATCTGTTATCGTGATATTC 73 7031114 0.86851819 15 57 442 0.846153846 1.40936947 0.230769231 0.164383562 0.32967033 73 12 2 77 2L:7031079-7031152 7 Rab30 FBtr0079427|FBtr0079426|FBtr0079428 7030491|7030491|7030491 7031433|7031433|7031433 GCAGCTA 7mer-A1 dme-miR-980-3p 2L - 7031083 7031201 3'utr Rab30 FlyBase G6536.2 AAGGTATTTAGAGCAATTCTCTTCGCTTTCACTAAACTACGATAACAACAAACATTTAAAGTACAATGTGCAAACGGATCTGGAAACTGTGCAGCTAATCTGTTATCTGTTATCGTGAT 68 7031114 0.85457327 18 59 422 0.909090909 1.653212514 0.151515152 0.323529412 0.535353535 68 8 1 90 2L:7031083-7031201 7 40.5 558 FBgn0031882 194.3333333 12.53666667 18.90666667 0.208404803 3.230523797 2.142101551 3 3 3 0.2 dme-miR-283-5p 7mer-m8 TGATATT 2L 7031367 7031373 - 2L_7031367_7031373_- 0.618873672 0.619846192 0.619359932 0.000687661 Rab30 FBtr0079428|FBtr0079426|FBtr0079427 7030491|7030491|7030491 7031433|7031433|7031433 2L - 7031326 7031486 stop_codon Rab30 FlyBase G8410.1 ATTGCTGTGGCGGACTCGCCAGCGGCGGCTCCAACTCTAGTCAAGGCGGCTGAGCAGCTGCAAACTGAACTGGAAGCTGAGCAGCTAATCTGTAACTTGTTAAGGACTAATCGTGATATTCCATTTATCTTTTATTACCACAATGCTCCCACATTCTAACA 131 7031377 0.96686346 20 125 697 0.951219512 1.716003344 0.158536585 0.183206107 0.347560976 131 6 2 156 2L:7031326-7031486 7 Rab30 FBtr0079427|FBtr0079426|FBtr0079428 7030491|7030491|7030491 7031433|7031433|7031433 TGATATT 7mer-m8 dme-miR-283-5p 2L - 7031349 7031507 stop_codon Rab30 FlyBase G6538.1 GTGCCAAGGCAGCGCAGAGCAATTGCTGTGGCGGACTCGCCAGCGGCGGCTCCAACTCTAGTCAAGGCGGCTGAGCAGCTGCAAACTGAACTGGAAGCTGAGCAGCTAATCTGTAACTTGTTAAGGACTAATCGTGATATTCCATTTATCTTTTATTAC 119 7031377 0.971845675 18 109 631 0.891752577 1.459894853 0.12371134 0.428571429 0.649484536 119 16 5 173 2L:7031349-7031507 7 58.5 559 FBgn0031882 194.3333333 12.53666667 18.90666667 0.30102916 4.666312151 3.094146685 4 4 4 0.2 dme-bantam-3p 6mer3-8 TGATCT 2L 7034833 7034838 + 2L_7034833_7034838_+ 0.999943574 0.998547716 0.999245645 0.00098705 Caper FBtr0344708|FBtr0344712|FBtr0344709|FBtr0344711 7034209|7034497|7034209|7034497 7037613|7037613|7037613|7037878 2L + 7034813 7034842 5'utr Caper FlyBase G2689.1 GCTAAACATTCCCCCAAAACTGATCTGATT 6 7034833 0.755958728 3 6 27 1 0.903089987 0.25 0.333333333 0.5 6 0 0 8 2L:7034813-7034842 6 Caper FBtr0344711|FBtr0344709|FBtr0344712|FBtr0344708 7034497|7034209|7034497|7034209 7037878|7037613|7037613|7037613 TGATCT 6mer3-8 dme-bantam-3p 2L + 7034810 7034849 5'utr Caper FlyBase G2118.1 AGCGCTAAACATTCCCCCAAAACTGATCTGATTGAGAATG 8 7034841 0.889066532 3 8 39 1 1.041392685 0.727272727 0.375 0.545454545 8 0 0 11 2L:7034810-7034849 6 6.5 560 FBgn0031883 799.28 33.26666667 50.99666667 0.008132319 0.195390782 0.127459311 0 -8 -4 0.2 dme-miR-11-3p 7mer-m1 TGTGATG 2L 7054713 7054719 + 2L_7054713_7054719_+ 0.608706607 0.610723825 0.609715216 0.001426376 milt FBtr0306230|FBtr0306228|FBtr0306231|FBtr0306232|FBtr0306233|FBtr0306229 7054555|7054555|7054555|7054555|7054555|7054555 7054847|7054847|7056010|7054847|7056010|7056010 2L + 7054673 7054729 5'utr milt FlyBase G2717.1 TACGCGAGAACAAGTTGAATAACGAAACGTAATGTAATCGTGTGATGAACGTTTAGT 14 7054688 0.968250832 9 13 69 0.933333333 1.146128036 0.2 0.071428571 0.133333333 14 1 0 14 2L:7054673-7054729 7 milt FBtr0306233|FBtr0306229|FBtr0306230|FBtr0306228|FBtr0306231|FBtr0306232 7054555|7054555|7054555|7054555|7054555|7054555 7056010|7056010|7054847|7054847|7056010|7054847 TGTGATG 7mer-m1 dme-miR-11-3p 2L + 7054668 7054738 5'utr milt FlyBase G2144.1 AGCACTACGCGAGAACAAGTTGAATAACGAAACGTAATGTAATCGTGTGATGAACGTTTAGTTTAATTTTT 14 7054688 0.967299234 9 14 77 1 1.431363764 0.333333333 0.5 0.740740741 14 0 0 27 2L:7054668-7054738 7 8.5 561 FBgn0262872 1801.88 44.2 67.81666667 0.004717295 0.192307692 0.125337921 25 25 25 0.2 dme-miR-1008-3p 8mer-A1 AGCTGTGA 2L 7054811 7054818 + 2L_7054811_7054818_+ 0.453606384 0.481398614 0.467502499 0.019652053 milt FBtr0306230|FBtr0306228|FBtr0306231|FBtr0306232|FBtr0306233|FBtr0306229 7054555|7054555|7054555|7054555|7054555|7054555 7054847|7054847|7056010|7054847|7056010|7056010 2L + 7054738 7054884 5'utr-coding milt FlyBase G2718.1 TCTGTTTAATACCCCGCATAATGCCTGTCATCGCCACCTTAAGCAACACTGGAAAGAAGGTTTTAGTGTTTGTAGCTGTGATTTGTAAATACATATATAGAGAAATGTTTAAATTTAGTAGTTATTAATCGAGTACTTCGCATATTA 603 7054820 0.84434385 30 565 5992 0.936528497 1.95604831 0.325129534 0.225538972 0.39507772 603 42 7 723 2L:7054738-7054884 8 milt FBtr0306233|FBtr0306229|FBtr0306230|FBtr0306228|FBtr0306231|FBtr0306232 7054555|7054555|7054555|7054555|7054555|7054555 7056010|7056010|7054847|7054847|7056010|7054847 AGCTGTGA 8mer-A1 dme-miR-1008-3p 2L + 7054741 7054867 5'utr-coding milt FlyBase G2145.1 GTTTAATACCCCGCATAATGCCTGTCATCGCCACCTTAAGCAACACTGGAAAGAAGGTTTTAGTGTTTGTAGCTGTGATTTGTAAATACATATATAGAGAAATGTTTAAATTTAGTAGTTATTAATC 451 7054820 0.872320436 28 417 4539 0.935714286 1.774848615 0.312857143 0.399113082 0.612857143 451 35 10 655 2L:7054741-7054867 8 456 562 FBgn0262872 1801.88 44.2 67.81666667 0.253069017 10.31674208 6.724010813 -9 -9 -9 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 2L 7055019 7055024 + 2L_7055019_7055024_+ 0.62406476 0.994967385 0.809516072 0.262267744 milt FBtr0306231|FBtr0306233|FBtr0306229 7054555|7054555|7054555 7056010|7056010|7056010 2L + 7054991 7055031 3'utr milt FlyBase G2721.1 ATTTTGCCAATTTTGTATTTATTTTCCCTGTGTTTATTACC 19 7055003 0.763425606 9 19 248 1 1.322219295 0.047619048 0.105263158 0.19047619 19 0 0 21 2L:7054991-7055031 6 milt FBtr0306233|FBtr0306229|FBtr0306231 7054555|7054555|7054555 7056010|7056010|7056010 TGTGTT 6mer3-8 dme-miR-317-3p 2L + 7054946 7055030 3'utr milt FlyBase G2146.1 ATAGAGAAACCGAGTTCCAAAGCAGCTATTTTTAATTTAAACTACATTTTGCCAATTTTGTATTTATTTTCCCTGTGTTTATTAC 22 7055002 0.990666913 13 21 229 0.926829268 1.579783597 0.024390244 0.727272727 0.853658537 22 3 0 38 2L:7054946-7055030 6 7 563 FBgn0262872 1801.88 44.2 67.81666667 0.003884831 0.158371041 0.103219464 16 17 16.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2L 7055393 7055399 + 2L_7055393_7055399_+ 0.661344563 0.661535602 0.661440083 0.000135057 milt FBtr0306231|FBtr0306233|FBtr0306229 7054555|7054555|7054555 7056010|7056010|7056010 2L + 7055363 7055433 3'utr milt FlyBase G2724.1 ACATAAATTATAGCGAAAAACGATTATTTTTCTAGTCCTACACTGGGTGGGTGCTCGTTTGGCTATGCAGA 73 7055392 0.848475309 11 70 658 0.964285714 1.908485019 0.095238095 0.095890411 0.214285714 73 3 0 81 2L:7055363-7055433 7 milt FBtr0306233|FBtr0306229|FBtr0306231 7054555|7054555|7054555 7056010|7056010|7056010 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2L + 7055372 7055428 3'utr milt FlyBase G2149.1 ATAGCGAAAAACGATTATTTTTCTAGTCCTACACTGGGTGGGTGCTCGTTTGGCTAT 38 7055392 0.609120628 6 37 350 0.962264151 1.707570176 0.056603774 0.342105263 0.528301887 38 2 0 51 2L:7055372-7055428 7 49.5 564 FBgn0262872 1801.88 44.2 67.81666667 0.027471308 1.119909502 0.729909069 1 1 1 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 2L 7062286 7062291 + 2L_7062286_7062291_+ 0.999995922 0.999321885 0.999658904 0.00047659 Mnn1 FBtr0079401|FBtr0110978 7061720|7061720 7062665|7063586 2L + 7062227 7062303 3'utr Mnn1 FlyBase G2734.1 ATTTATGATGTATTTTTAGCTGTTATACTTTATCCCCTATGTATTTATTGCTACAACTATGTGTTTTCCCCTCAAGC 16 7062287 0.987224303 7 16 142 1 1.278753601 0.157894737 0.125 0.263157895 16 0 0 19 2L:7062227-7062303 6 Mnn1 FBtr0079401|FBtr0110978 7061720|7061720 7062665|7063586 TGTGTT 6mer3-8 dme-miR-317-3p 2L + 7062259 7062300 3'utr Mnn1 FlyBase G2158.1 TCCCCTATGTATTTATTGCTACAACTATGTGTTTTCCCCTCA 8 7062292 0.982090946 4 8 60 1 1.176091259 0 0.5 0.733333333 8 0 0 15 2L:7062259-7062300 6 10 565 FBgn0031885 716.3333333 17.91333333 27.53333333 0.013959981 0.558243394 0.363196126 -1 -6 -3.5 0.2 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 2L 7062349 7062355 + 2L_7062349_7062355_+ 0.597821785 0.609746696 0.60378424 0.008432178 Mnn1 FBtr0079401|FBtr0110978 7061720|7061720 7062665|7063586 2L + 7062323 7062425 3'utr Mnn1 FlyBase G2735.1 TTTATTGTGTTTAAGCGTAACTTAATTGGTGCTTTTCTTCGAAAACGAATGAGAAATATAGGTTCTGTGTTTGATTTGATCACACCTTGAGGCAAAAATCTTG 157 7062348 0.85260619 15 153 1482 0.967567568 1.951823035 0.07027027 0.133757962 0.264864865 157 5 1 179 2L:7062323-7062425 7 Mnn1 FBtr0079401|FBtr0110978 7061720|7061720 7062665|7063586 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 2L + 7062325 7062425 3'utr Mnn1 FlyBase G2159.1 TATTGTGTTTAAGCGTAACTTAATTGGTGCTTTTCTTCGAAAACGAATGAGAAATATAGGTTCTGTGTTTGATTTGATCACACCTTGAGGCAAAAATCTTG 113 7062348 0.903132634 10 108 1064 0.970930233 1.921686475 0.063953488 0.336283186 0.563953488 113 4 1 167 2L:7062325-7062425 7 114 566 FBgn0031885 716.3333333 17.91333333 27.53333333 0.159143788 6.363974693 4.140435835 1 1 1 0.2 dme-miR-282-5p 7mer-A1 GAGGCTA 2L 7062515 7062521 + 2L_7062515_7062521_+ 0.785879187 0.791308843 0.788594015 0.003839307 Mnn1 FBtr0079401|FBtr0110978 7061720|7061720 7062665|7063586 2L + 7062437 7062559 3'utr Mnn1 FlyBase G2736.1 TTGAACAATAACCGAATTGAAGTCCAAATGGATAGACGGACTGCTCGTATTTATGTATTTACTTTAAAGCATTTTATTGAGGCTAAGCTGATTAATTTAACTCTATTTACATATATATCCTCT 239 7062513 0.985110033 18 235 1917 0.989619377 2.456366033 0.429065744 0.179916318 0.321799308 239 3 0 286 2L:7062437-7062559 7 Mnn1 FBtr0079401|FBtr0110978 7061720|7061720 7062665|7063586 GAGGCTA 7mer-A1 dme-miR-282-5p 2L + 7062493 7062541 3'utr Mnn1 FlyBase G2160.2 ATTTACTTTAAAGCATTTTATTGAGGCTAAGCTGATTAATTTAACTCTA 138 7062513 0.746333047 9 133 1089 0.969387755 2.278753601 0.459183673 0.333333333 0.530612245 138 6 0 190 2L:7062493-7062541 7 179 567 FBgn0031885 716.3333333 17.91333333 27.53333333 0.249883667 9.992556755 6.501210654 2 2 2 0.2 dme-miR-11-3p 8mer-m1 CTGTGATG 2L 7062969 7062976 + 2L_7062969_7062976_+ 0.405056633 0.413070727 0.40906368 0.005666824 Mnn1 FBtr0110978 7061720 7063586 2L + 7062950 7062983 3'utr Mnn1 FlyBase G2738.1 TGATTTGTGCGTAGAGCATCTGTGATGAATAATA 26 7062968 0.81241145 2 23 151 0.90625 1.462397998 0 0.192307692 0.34375 26 3 0 29 2L:7062950-7062983 8 Mnn1 FBtr0110978 7061720 7063586 CTGTGATG 8mer-m1 dme-miR-11-3p 2L + 7062946 7062995 3'utr Mnn1 FlyBase G2163.1 AATTTGATTTGTGCGTAGAGCATCTGTGATGAATAATAATGTTTAAAAAA 35 7062968 0.952450363 4 33 211 0.959183673 1.672097858 0 0.314285714 0.510204082 35 2 0 47 2L:7062946-7062995 8 30.5 568 FBgn0031885 716.3333333 17.91333333 27.53333333 0.042577943 1.702642352 1.107748184 1 1 1 0.2 dme-miR-318-3p 7mer-A1 CCAGTGA 2L 7069854 7069860 - 2L_7069854_7069860_- 0.8231413 0.822116608 0.822628954 0.000724572 Pvf2 FBtr0079423 7069534 7070160 2L - 7069819 7069887 3'utr Pvf2 FlyBase G8420.1 AATCTTAATTAAGCTGAGTTTAAGATGCCAGTGAAACTAGATAAAATCAGACATTGAGAACTGAAAGTA 23 7069833 0.946241372 6 23 99 1 1.414973348 0.192307692 0.086956522 0.192307692 23 0 0 26 2L:7069819-7069887 7 Pvf2 FBtr0079423 7069534 7070160 CCAGTGA 7mer-A1 dme-miR-318-3p 2L - 7069817 7069877 3'utr Pvf2 FlyBase G6545.1 AAGCTGAGTTTAAGATGCCAGTGAAACTAGATAAAATCAGACATTGAGAACTGAAAGTATT 13 7069833 0.737697084 5 13 55 1 1.301029996 0.15 0.230769231 0.5 13 0 0 20 2L:7069817-7069877 7 8 569 FBgn0031888 877.1766667 51.15666667 78.84 0.00912017 0.156382355 0.101471334 -27 -27 -27 0.2 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 7099159 7099166 - 2L_7099159_7099166_- 0.630901232 0.630915478 0.630908355 1.01E-05 Pvf3 FBtr0112612|FBtr0342658 7098186|7098186 7100092|7100092 2L - 7099152 7099189 3'utr Pvf3 FlyBase G8436.1 AAATTAAATTTTCATATTTAATTTCTAGTCAAATTTTC 68 7099167 0.743921356 4 67 723 0.988372093 1.929418926 0 0.235294118 0.395348837 68 1 0 85 2L:7099152-7099189 8 Pvf3 FBtr0112612|FBtr0342658 7098186|7098186 7100092|7100092 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 7099151 7099178 3'utr Pvf3 FlyBase G6556.1 TCATATTTAATTTCTAGTCAAATTTTCA 32 7099167 0.738120811 2 32 330 1 1.544068044 0 0.09375 0.171428571 32 0 0 35 2L:7099151-7099178 8 49.5 570 FBgn0085407 30.66666667 0.876666667 1.326666667 1.614130435 56.46387833 37.31155779 1 1 1 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 2L 7099396 7099401 - 2L_7099396_7099401_- 0.989044604 0.998512846 0.993778725 0.006695028 Pvf3 FBtr0112612|FBtr0342658 7098186|7098186 7100092|7100092 2L - 7099375 7099435 3'utr Pvf3 FlyBase G8438.1 ATGCGTATGCTAAATGAAATTCCAAATATATAAATTGACTGCGTTTTTAGTTTTAATTGAC 29 7099401 0.893762097 12 28 353 0.96875 1.491361694 0.09375 0.103448276 0.1875 29 1 0 31 2L:7099375-7099435 6 Pvf3 FBtr0112612|FBtr0342658 7098186|7098186 7100092|7100092 TTGACT 6mer3-8 dme-miR-1012-3p 2L - 7099376 7099428 3'utr Pvf3 FlyBase G6558.1 TGCTAAATGAAATTCCAAATATATAAATTGACTGCGTTTTTAGTTTTAATTGA 14 7099401 0.994798206 9 11 153 0.869565217 1.301029996 0 0.428571429 0.652173913 14 3 0 20 2L:7099376-7099428 6 18 571 FBgn0085407 30.66666667 0.876666667 1.326666667 0.586956522 20.53231939 13.5678392 0 0 0 0.2 dme-miR-14-3p 6mer3-8 AAGACT 2L 7099561 7099566 - 2L_7099561_7099566_- 0.996533106 0.974061867 0.985297486 0.015889538 Pvf3 FBtr0112612|FBtr0342658 7098186|7098186 7100092|7100092 2L - 7099549 7099594 3'utr Pvf3 FlyBase G8439.1 AAAAATCTGTATCTTAGCAAATGGAAATAAGACTTTTTTGCGCATG 62 7099559 0.755324505 6 61 536 0.960526316 1.86332286 0.026315789 0.161290323 0.315789474 62 3 0 73 2L:7099549-7099594 6 Pvf3 FBtr0112612|FBtr0342658 7098186|7098186 7100092|7100092 AAGACT 6mer3-8 dme-miR-14-3p 2L - 7099552 7099590 3'utr Pvf3 FlyBase G6559.1 ATCTGTATCTTAGCAAATGGAAATAAGACTTTTTTGCGC 28 7099559 0.69526919 4 23 213 0.904761905 1.579783597 0.047619048 0.321428571 0.547619048 28 4 0 38 2L:7099552-7099590 6 44.5 572 FBgn0085407 30.66666667 0.876666667 1.326666667 1.451086957 50.76045627 33.54271357 -7 -7 -7 0.2 dme-miR-190-5p 6mer2-7 CATATC 2L 7099946 7099951 - 2L_7099946_7099951_- 0.5255169 0.870378865 0.697947883 0.243854259 Pvf3 FBtr0112611|FBtr0112612|FBtr0301525|FBtr0342658 7099690|7098186|7099690|7098186 7100092|7100092|7100092|7100092 2L - 7099941 7099988 3'utr Pvf3 FlyBase G8441.1 AAGAGTAAAGGCGAAATGAGAGACGTGAATTTAGTTGCATATCCTATA 6 7099959 0.957615934 3 6 32 1 0.77815125 0.5 0 0 6 0 0 6 2L:7099941-7099988 6 Pvf3 FBtr0112611|FBtr0112612|FBtr0301525|FBtr0342658 7099690|7098186|7099690|7098186 7100092|7100092|7100092|7100092 CATATC 6mer2-7 dme-miR-190-5p 2L - 7099941 7099986 3'utr Pvf3 FlyBase G6560.1 GAGTAAAGGCGAAATGAGAGACGTGAATTTAGTTGCATATCCTATA 6 7099972 0.999004622 4 6 30 1 0.77815125 0.5 0 0 6 0 0 6 2L:7099941-7099986 6 2.5 573 FBgn0085407 30.66666667 0.876666667 1.326666667 0.081521739 2.851711027 1.884422111 8 21 14.5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 71200 71205 + 2L_71200_71205_+ 0.61177133 0.531313881 0.571542606 0.056891973 dbr FBtr0306539|FBtr0306537|FBtr0078100 70894|70894|70894 71390|71390|71390 2L + 71144 71267 3'utr dbr FlyBase G403.1 TCGATTAATTATTCAGCGCTTAAGTTTTCTTTTGGGTTAAGTTTTGAACATATAATGTACCTTCTGGTGTATGTTAACATAAAATCCAGAATATGCCTTTAGACAGCAGAACGGAAGATATTTA 38 71199 0.987040899 10 35 308 0.918367347 1.352182518 0.469387755 0.210526316 0.387755102 38 3 1 45 2L:71144-71267 6 dbr FBtr0306539|FBtr0306537|FBtr0078100 70894|70894|70894 71390|71390|71390 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 71177 71217 3'utr dbr FlyBase G339.1 GGGTTAAGTTTTGAACATATAATGTACCTTCTGGTGTATGT 25 71199 0.804881606 3 25 214 1 1.591064607 0.179487179 0.4 0.615384615 25 0 0 39 2L:71177-71217 6 27 574 FBgn0067779 850.6933333 26.96666667 41.62666667 0.031738817 1.001236094 0.648622678 1 1 1 0.2 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 7185351 7185358 + 2L_7185351_7185358_+ 0.427023059 0.379615954 0.403319506 0.033521882 CG4495 FBtr0079405|FBtr0113028 7185291|7185291 7185519|7185529 2L + 7185317 7185388 3'utr CG4495 FlyBase G2745.1 CGCTTCAAGCGCCCCAATCTTAGTCACTTTTTCCTACGCTTACGCTTTTTACTATTTATTTTTGTAGTTAAC 34 7185355 0.991689567 8 33 357 1 1.633468456 0.023255814 0.264705882 0.418604651 34 0 0 43 2L:7185317-7185388 8 CG4495 FBtr0079405|FBtr0113028 7185291|7185291 7185519|7185529 TACGCTTA 8mer-A1 dme-miR-965-3p 2L + 7185306 7185371 3'utr CG4495 FlyBase G2169.1 GTGGATTCTCCCGCTTCAAGCGCCCCAATCTTAGTCACTTTTTCCTACGCTTACGCTTTTTACTAT 21 7185356 0.912091063 9 20 199 0.967741935 1.477121255 0 0.380952381 0.580645161 21 1 0 30 2L:7185306-7185371 8 23.5 575 FBgn0031893 272.69 17.27 26.35 0.086178444 1.36074117 0.891840607 -4 -5 -4.5 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 2L 7190783 7190788 - 2L_7190783_7190788_- 0.998171968 0.98265936 0.990415664 0.010969065 CG4497 FBtr0079418|FBtr0302948 7190429|7190429 7191401|7191401 2L - 7190748 7190814 3'utr CG4497 FlyBase G8445.1 TAGCCAGAGTTTATTGCCTCGATCTTTGTGTTATAGAATGTTTTCCCATTTCCAATGTTTCGGTTAA 15 7190790 0.986409356 6 15 131 1 1.230448921 0.058823529 0.133333333 0.235294118 15 0 0 17 2L:7190748-7190814 6 CG4497 FBtr0079418|FBtr0302948 7190429|7190429 7191401|7191401 TGTGTT 6mer3-8 dme-miR-317-3p 2L - 7190773 7190809 3'utr CG4497 FlyBase G6562.1 AGAGTTTATTGCCTCGATCTTTGTGTTATAGAATGTT 10 7190789 0.694115088 5 10 98 1 1.204119983 0 0.6 0.75 10 0 0 16 2L:7190773-7190809 6 9 576 FBgn0031895 127.87 6.053333333 9.286666667 0.070383984 1.486784141 0.969131371 2 1 1.5 0.2 dme-miR-8-3p 7mer-A1 AGTATTA 2L 7195195 7195201 - 2L_7195195_7195201_- 0.808307125 0.822428139 0.815367632 0.009985055 CG4502 FBtr0079416|FBtr0079417 7194906|7194906 7195555|7195555 2L - 7195175 7195214 3'utr CG4502 FlyBase G8451.1 AAATGGATATTTAAGTATTATTAGTTAAACAGGAACAAAA 11 7195205 0.992192846 5 9 109 0.846153846 1.041392685 0.307692308 0.181818182 0.307692308 11 2 0 11 2L:7195175-7195214 7 CG4502 FBtr0079416|FBtr0079417 7194906|7194906 7195555|7195555 AGTATTA 7mer-A1 dme-miR-8-3p 2L - 7195176 7195236 3'utr CG4502 FlyBase G6566.1 ATAGGAAGTTTCGCCGAATACAAAATGGATATTTAAGTATTATTAGTTAAACAGGAACAAA 11 7195204 0.992249327 5 8 83 0.769230769 0.698970004 0.230769231 0.181818182 0.307692308 11 2 1 10 2L:7195176-7195236 7 10 577 FBgn0031896 751.2833333 44.36333333 68.21333333 0.013310557 0.225411376 0.146598905 4 3 3.5 0.2 dme-miR-33-5p 8mer-A1 CAATGCAA 2L 7195488 7195495 - 2L_7195488_7195495_- 0.574420591 0.518452657 0.546436624 0.039575282 CG4502 FBtr0079416|FBtr0079417 7194906|7194906 7195555|7195555 2L - 7195480 7195535 3'utr CG4502 FlyBase G8453.1 AGGAAACTCAGCTCAGATGCTCTGCGTTTGCCAACACAACCAATGCAATTTAATAA 16 7195518 0.774238376 7 14 78 0.904761905 0.977723605 0.047619048 0.3125 0.476190476 16 1 1 19 2L:7195480-7195535 8 CG4502 FBtr0079416|FBtr0079417 7194906|7194906 7195555|7195555 CAATGCAA 8mer-A1 dme-miR-33-5p 2L - 7195442 7195548 3'utr CG4502 FlyBase G6567.2 ATTCCGGACCGCAAGGAAACTCAGCTCAGATGCTCTGCGTTTGCCAACACAACCAATGCAATTTAATAATCAGCCACCCAGCCAAGTTCGCTCATAGTAATACATCA 23 7195518 0.971582171 8 21 121 0.95 1.579783597 0.1 0.434782609 0.675 23 2 0 38 2L:7195442-7195548 8 6 578 FBgn0031896 751.2833333 44.36333333 68.21333333 0.007986334 0.135246825 0.087959343 23 23 23 0.2 dme-miR-1003-3p 8mer-A1 ATGTGAGA 2L 7205677 7205684 - 2L_7205677_7205684_- 0.615887254 0.620997419 0.618442336 0.003613386 CG13784 FBtr0110799|FBtr0330197|FBtr0330199|FBtr0330198 7205251|7204536|7205251|7205251 7208015|7208015|7206347|7206347 2L - 7205634 7205714 3'utr CG13784 FlyBase G8460.1 AGAACATAAAACCAATGTACATTACTTCTTATGTGAGATGCAGCTACAAAAATTAGCTTACAATGTAAACTAGTTTTAAAC 95 7205677 0.828359519 13 90 691 0.946428571 1.72427587 0.017857143 0.147368421 0.276785714 95 5 1 106 2L:7205634-7205714 8 CG13784 FBtr0330198|FBtr0330199|FBtr0330197|FBtr0110799 7205251|7205251|7204536|7205251 7206347|7206347|7208015|7208015 ATGTGAGA 8mer-A1 dme-miR-1003-3p 2L - 7205582 7205717 3'utr CG13784 FlyBase G6573.1 ACTAGAACATAAAACCAATGTACATTACTTCTTATGTGAGATGCAGCTACAAAAATTAGCTTACAATGTAAACTAGTTTTAAACATTTAGTTTCGGACAATGTGAATTTAAAGAAAAGGGTTTCAGCTGGGGAAGG 77 7205677 0.984363879 17 71 562 0.924369748 1.740362689 0.12605042 0.38961039 0.605042017 77 8 1 110 2L:7205582-7205717 8 66 579 FBgn0031897 1244.07 88.35 137.0766667 0.053051677 0.747028862 0.481482382 -7 -7 -7 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 7220413 7220420 - 2L_7220413_7220420_- 0.645501427 0.627556859 0.636529143 0.012688678 ico FBtr0079413|FBtr0079413|FBtr0079413 7220367|7220367|7220367 7220532|7220532|7220532 2L - 7220382 7220440 3'utr ico FlyBase G8472.1 ACAACAATTTTCAGTTTTCACTGTGATAAATGCGAAGTGTACAGTTATTTGTATAATAA 23 7220425 0.987635954 8 20 183 0.870967742 1.431363764 0.096774194 0.304347826 0.483870968 23 4 0 27 2L:7220382-7220440 8 ico FBtr0079413|FBtr0079413|FBtr0079413 7220367|7220367|7220367 7220532|7220532|7220532 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 7220401 7220429 3'utr ico FlyBase G6584.1 CAGTTTTCACTGTGATAAATGCGAAGTGT 14 7220424 0.834684988 4 10 106 0.823529412 1.146128036 0 0.214285714 0.352941176 14 3 0 14 2L:7220401-7220429 8 18.5 580 FBgn0263133 394.38 19.21 29.5 0.046909072 0.963040083 0.627118644 5 4 4.5 0.2 dme-miR-277-3p 7mer-m8 TGCATTT 2L 7226705 7226711 - 2L_7226705_7226711_- 0.620192791 0.614734386 0.617463589 0.003859672 Ndae1 FBtr0331659|FBtr0331662|FBtr0299538|FBtr0331661|FBtr0331663|FBtr0331660|FBtr0299537 7226136|7226136|7226460|7226460|7226460|7226460|7226460 7226914|7226914|7226914|7226914|7226914|7226914|7226914 2L - 7226681 7226758 3'utr Ndae1 FlyBase G8477.1 ACAAAACCAACGATAAACTCAATTATTTATAGATTTTTTTAATAATTTGCATTTTGTCGGCCTTGATACATTTTATTG 12 7226695 0.987914998 5 11 113 0.916666667 1.041392685 0 0 0 12 1 0 11 2L:7226681-7226758 7 Ndae1 FBtr0299537|FBtr0331660|FBtr0331663|FBtr0331661|FBtr0299538|FBtr0331662|FBtr0331659 7226460|7226460|7226460|7226460|7226460|7226136|7226136 7226914|7226914|7226914|7226914|7226914|7226914|7226914 TGCATTT 7mer-m8 dme-miR-277-3p 2L - 7226673 7226759 3'utr Ndae1 FlyBase G6588.1 CACAAAACCAACGATAAACTCAATTATTTATAGATTTTTTTAATAATTTGCATTTTGTCGGCCTTGATACATTTTATTGAACTAGTT 8 7226712 0.989669798 6 8 78 1 1.041392685 0 0.25 0.454545455 8 0 0 11 2L:7226673-7226759 7 6.5 581 FBgn0259111 820.0933333 22.69 34.66 0.007925927 0.28646981 0.187536065 -16 1 -7.5 0.2 dme-miR-1003-3p 7mer-A1 TGTGAGA 2L 7384830 7384836 - 2L_7384830_7384836_- 0.770639514 0.729206893 0.749923203 0.029297272 CG5149 FBtr0079469 7384484 7384886 2L - 7384781 7384859 3'utr CG5149 FlyBase G8486.1 GTTTTGTTTTATCATCGAGAATTTGTGAGACCATGCCCGATATGGGTGTGCAGTTAATGATTCAATTCAGTTTCCTTAG 20 7384837 0.979498461 5 20 144 1 1.361727836 0.304347826 0.15 0.260869565 20 0 0 23 2L:7384781-7384859 7 CG5149 FBtr0079469 7384484 7384886 TGTGAGA 7mer-A1 dme-miR-1003-3p 2L - 7384818 7384860 3'utr CG5149 FlyBase G6592.1 AGTTTTGTTTTATCATCGAGAATTTGTGAGACCATGCCCGATA 14 7384838 0.93459576 3 14 76 1 1.255272505 0.166666667 0.214285714 0.388888889 14 0 0 18 2L:7384818-7384860 7 15.5 582 FBgn0031904 297.6666667 19.02666667 29.12333333 0.052071669 0.814646111 0.532219297 1 2 1.5 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2L 7472626 7472632 - 2L_7472626_7472632_- 0.671191145 0.671561998 0.671376571 0.000262266 Ziz FBtr0330722|FBtr0330726|FBtr0330724|FBtr0332201|FBtr0330721|FBtr0330728|FBtr0330723|FBtr0330725|FBtr0330727 7472511|7472511|7472511|7472511|7472511|7472511|7472511|7472511|7472511 7473645|7473645|7473645|7473110|7473645|7473645|7473645|7473645|7473645 2L - 7472604 7472682 3'utr Ziz FlyBase G8509.1 GAAATTAGTTTTAGTGTTAGACAAATAAGTTCCCGCAAGCAACAGAACTTACCAAAGTATTCAGATAAAGGAAAAACCT 109 7472633 0.796257468 8 108 470 0.991935484 2.089905111 0.048387097 0.119266055 0.225806452 109 1 0 123 2L:7472604-7472682 7 Ziz FBtr0330725|FBtr0330727|FBtr0330728|FBtr0330723|FBtr0332201|FBtr0330721|FBtr0330722|FBtr0330726|FBtr0330724 7472511|7472511|7472511|7472511|7472511|7472511|7472511|7472511|7472511 7473645|7473645|7473645|7473645|7473110|7473645|7473645|7473645|7473645 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 7472539 7472680 3'utr Ziz FlyBase G6606.1 AATTAGTTTTAGTGTTAGACAAATAAGTTCCCGCAAGCAACAGAACTTACCAAAGTATTCAGATAAAGGAAAAACCTATTTAACAGATCTACGGATATATATTTACATACATGCATTTTCTAGTGAAATCGTATAATGAACT 104 7472633 0.971371604 15 100 586 0.959183673 1.672097858 0.020408163 0.346153846 0.537414966 104 4 2 141 2L:7472539-7472680 7 83.5 583 FBgn0260486 1355.053333 19.13333333 29.37 0.061621191 4.364111498 2.843037113 1 1 1 0.2 dme-miR-980-5p 6mer2-7 AAAAAC 2L 7723243 7723248 - 2L_7723243_7723248_- 0.9445634 0.941250014 0.942906707 0.002342928 CG13795 FBtr0343407 7723043 7723555 2L - 7723238 7723286 3'utr CG13795 FlyBase G8579.1 TTACATAGTTTGTCTATCGAGAGAGAGAGAGAGCTTTTAAAAACGTGTA 26 7723250 0.74404892 6 25 125 0.965517241 1.447158031 0.103448276 0.115384615 0.206896552 26 1 0 28 2L:7723238-7723286 6 CG13795 FBtr0343407 7723043 7723555 AAAAAC 6mer2-7 dme-miR-980-5p 2L - 7723239 7723277 3'utr CG13795 FlyBase G6651.1 TTGTCTATCGAGAGAGAGAGAGAGCTTTTAAAAACGTGT 16 7723250 0.717494537 3 16 80 1 1.380211242 0.041666667 0.4375 0.625 16 0 0 24 2L:7723239-7723277 6 18.5 584 FBgn0031937 195.5733333 10.18333333 15.44666667 0.094593673 1.816693944 1.1976694 2 2 2 0.2 dme-miR-305-3p 7mer-m8 ATGTGCC 2L 7786514 7786520 - 2L_7786514_7786520_- 0.669102552 0.669792705 0.669447628 0.000487974 CG7149 FBtr0079496 7786158 7786899 2L - 7786496 7786537 3'utr CG7149 FlyBase G8600.1 ATGATCCGATAAGTATTATGTGCCTGAAGACAGCTACTGAAT 119 7786519 0.694548704 4 119 689 1 2.158362492 0.159722222 0.159663866 0.305555556 119 0 0 144 2L:7786496-7786537 7 CG7149 FBtr0079496 7786158 7786899 ATGTGCC 7mer-m8 dme-miR-305-3p 2L - 7786495 7786540 3'utr CG7149 FlyBase G6663.1 TGCATGATCCGATAAGTATTATGTGCCTGAAGACAGCTACTGAATG 79 7786519 0.688869565 4 79 451 1 2.06069784 0.243478261 0.291139241 0.513043478 79 0 0 115 2L:7786495-7786540 7 99 585 FBgn0031948 141.2833333 6.946666667 10.71666667 0.700719594 14.25143954 9.237947123 -1 -1 -1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 7786831 7786837 - 2L_7786831_7786837_- 0.794793142 0.796451195 0.795622168 0.001172454 CG7149 FBtr0079496|FBtr0079496|FBtr0079496|FBtr0343406|FBtr0343406|FBtr0343406 7786158|7786158|7786158|7786158|7786158|7786158 7786899|7786899|7786899|7786899|7786899|7786899 2L - 7786804 7786852 3'utr CG7149 FlyBase G8601.1 CAAAATCAACCATCTTGTGATATATAGTATATATACATATATATATAAA 27 7786839 0.9920715 6 20 234 0.724137931 0.720159303 0.034482759 0.074074074 0.137931034 27 5 3 21 2L:7786804-7786852 7 CG7149 FBtr0079496|FBtr0079496|FBtr0079496|FBtr0343406|FBtr0343406|FBtr0343406 7786158|7786158|7786158|7786158|7786158|7786158 7786899|7786899|7786899|7786899|7786899|7786899 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 7786814 7786852 3'utr CG7149 FlyBase G6665.1 CAAAATCAACCATCTTGTGATATATAGTATATATACATA 16 7786838 0.743488012 4 14 137 0.875 1.021189299 0 0.3125 0.541666667 16 2 1 21 2L:7786814-7786852 7 21 586 FBgn0031948 141.2833333 6.946666667 10.71666667 0.14863749 3.02303263 1.959564541 2 1 1.5 0.2 dme-miR-278-3p 7mer-m8 CCCACCG 2L 7791689 7791695 - 2L_7791689_7791695_- 0.615729668 0.608998832 0.61236425 0.004759465 LKR FBtr0079495|FBtr0343404 7791404|7791173 7791757|7791757 2L - 7791651 7791805 stop_codon LKR FlyBase G8606.1 CGCTCCGAGGGTCTGACTGCCACGGAAACCTCCAGATGGCTAAATTAAGTGATCTTAACTGATCCCGAGAAAATAGGCTTAAGTCTTCATTAATATTACTTTTTTGACTGCCCACCGCGTCGGGTGATACTTCTTGTTTTATCGCTCGGGTATTT 206 7791686 0.978352842 24 189 1276 0.925925926 1.653212514 0.152263374 0.165048544 0.29218107 206 14 4 225 2L:7791651-7791805 7 LKR FBtr0079495|FBtr0343404 7791404|7791173 7791757|7791757 CCCACCG 7mer-m8 dme-miR-278-3p 2L - 7791654 7791805 stop_codon LKR FlyBase G6669.1 CGCTCCGAGGGTCTGACTGCCACGGAAACCTCCAGATGGCTAAATTAAGTGATCTTAACTGATCCCGAGAAAATAGGCTTAAGTCTTCATTAATATTACTTTTTTGACTGCCCACCGCGTCGGGTGATACTTCTTGTTTTATCGCTCGGGTA 131 7791686 0.964811439 20 115 750 0.882051282 1.758407192 0.174358974 0.351145038 0.564102564 131 21 2 172 2L:7791654-7791805 7 87 587 FBgn0025687 1820.93 67.29333333 103.6233333 0.047777784 1.292847236 0.839579245 -9 -9 -9 0.2 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 7796640 7796645 - 2L_7796640_7796645_- 0.999974219 0.768370126 0.884172173 0.16376883 Herp FBtr0343403|FBtr0079493 7796312|7796544 7796929|7796929 2L - 7796624 7796665 3'utr Herp FlyBase G8627.1 AAGAACGTACTCTGTTTTTGATGTGAATAGTAGAATGTTTAT 7 7796650 0.986193808 7 7 59 1 1 0.3 0.285714286 0.5 7 0 0 10 2L:7796624-7796665 6 Herp FBtr0343403|FBtr0079493 7796312|7796544 7796929|7796929 ATGTGA 6mer3-8 dme-miR-1003-3p 2L - 7796571 7796657 3'utr Herp FlyBase G6686.1 ACTCTGTTTTTGATGTGAATAGTAGAATGTTTATAATCTGCACTGCAATCTGTGCTAGAGACGAACCTATGAAACCAAGATGCAATT 11 7796648 0.985970738 7 10 79 0.9375 1.176091259 0.0625 0.454545455 0.625 11 1 0 15 2L:7796571-7796657 6 5.5 588 FBgn0031950 371.7266667 21.11 32.2 0.014795818 0.260540028 0.170807453 5 3 4 0.2 dme-miR-14-3p 6mer3-8 AAGACT 2L 7892660 7892665 - 2L_7892660_7892665_- 0.849471635 0.97442977 0.911950702 0.088358791 Snoo FBtr0112719|FBtr0112718|FBtr0343409 7892323|7891185|7892323 7894084|7894084|7894084 2L - 7892606 7892685 3'utr Snoo FlyBase G8662.1 ACGTTTGCTAACTAGTTCTTAAGACTTCCCTCCGGCGAAGTTCTTTCCCTATTGTGAATGGCATCGAATGGTCCCCCTTT 25 7892660 0.843977212 5 24 196 0.964285714 1.431363764 0.035714286 0.12 0.214285714 25 1 0 27 2L:7892606-7892685 6 Snoo FBtr0112719|FBtr0112718|FBtr0343409 7892323|7891185|7892323 7894084|7894084|7894084 AAGACT 6mer3-8 dme-miR-14-3p 2L - 7892608 7892679 3'utr Snoo FlyBase G6717.1 GCTAACTAGTTCTTAAGACTTCCCTCCGGCGAAGTTCTTTCCCTATTGTGAATGGCATCGAATGGTCCCCCT 23 7892660 0.979164065 7 22 157 0.935483871 0.985276743 0.096774194 0.217391304 0.419354839 23 0 2 29 2L:7892608-7892679 6 12 589 FBgn0085450 1551.763333 25.89666667 39.58333333 0.007733138 0.4633801 0.303157895 -5 -5 -5 0.2 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 8039206 8039211 + 2L_8039206_8039211_+ 0.999911239 0.957508314 0.978709776 0.029983378 Cka FBtr0306001|FBtr0079537 8038200|8038200 8040826|8040826 2L + 8039176 8039241 3'utr Cka FlyBase G2898.1 ATTAATTAGAGGACAGTCGAGGTGAGACTTTGATGAACGGCGGCCGGGTTTATATACGCAGGTAGC 34 8039206 0.757407323 7 34 168 1 1.579783597 0.421052632 0.088235294 0.184210526 34 0 0 38 2L:8039176-8039241 6 Cka FBtr0079537|FBtr0306001 8038200|8038200 8040826|8040826 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L + 8039176 8039229 3'utr Cka FlyBase G2289.1 ATTAATTAGAGGACAGTCGAGGTGAGACTTTGATGAACGGCGGCCGGGTTTATA 23 8039206 0.959537009 6 23 115 1 1.491361694 0.516129032 0.260869565 0.451612903 23 0 0 31 2L:8039176-8039229 6 27 590 FBgn0044323 2376.946667 58.08333333 89.27666667 0.011359111 0.464849354 0.302430646 0 0 0 0.2 dme-miR-2a-2-5p 7mer-A1 GATGAGA 2L 8039372 8039378 + 2L_8039372_8039378_+ 0.711266903 0.755619236 0.733443069 0.031361812 Cka FBtr0306001|FBtr0079537 8038200|8038200 8040826|8040826 2L + 8039304 8039411 3'utr Cka FlyBase G2899.1 ATATAATTTCAATTGTCATTACCAAGGGGAGTACGCAATGCTTGATGGATTAACCACGACCATGTGAGGATGAGATATAAATAATAACTGCAGGCAAGCTATAAACGT 18 8039391 0.937994938 13 17 82 0.954545455 1.322219295 0.409090909 0.222222222 0.363636364 18 1 0 21 2L:8039304-8039411 7 Cka FBtr0079537|FBtr0306001 8038200|8038200 8040826|8040826 GATGAGA 7mer-A1 dme-miR-2a-2-5p 2L + 8039316 8039417 3'utr Cka FlyBase G2290.1 TTGTCATTACCAAGGGGAGTACGCAATGCTTGATGGATTAACCACGACCATGTGAGGATGAGATATAAATAATAACTGCAGGCAAGCTATAAACGTATGCTA 15 8039373 0.955696432 8 15 70 1 1.397940009 0.08 0.533333333 0.72 15 0 0 25 2L:8039316-8039417 7 6.5 591 FBgn0044323 2376.946667 58.08333333 89.27666667 0.002734601 0.111908178 0.072807378 -19 -1 -10 0.2 dme-miR-318-3p 6mer3-8 CCCAGT 2L 8053828 8053833 + 2L_8053828_8053833_+ 0.959627201 0.94022906 0.94992813 0.013716528 CG7466 FBtr0344789|FBtr0344788 8053047|8053047 8054326|8054326 2L + 8053804 8053849 3'utr CG7466 FlyBase G2914.1 AAAGTATTAATTATGATATTCCTTCCCAGTTGTGGTGGCTAGCATT 33 8053822 0.650022033 7 32 300 0.974358974 1.579783597 0.128205128 0.151515152 0.282051282 33 1 0 38 2L:8053804-8053849 6 CG7466 FBtr0344789|FBtr0344788 8053047|8053047 8054326|8054326 CCCAGT 6mer3-8 dme-miR-318-3p 2L + 8053809 8053848 3'utr CG7466 FlyBase G2301.1 ATTAATTATGATATTCCTTCCCAGTTGTGGTGGCTAGCAT 15 8053822 0.671704879 4 12 135 0.80952381 0.62838893 0.333333333 0.333333333 0.523809524 15 1 3 17 2L:8053809-8053848 6 23.5 592 FBgn0031981 647.3533333 7.71 11.75333333 0.036301659 3.047989624 1.999432785 6 6 6 0.2 dme-miR-184-3p 8mer-A1 TCCGTCCA 2L 8074805 8074812 - 2L_8074805_8074812_- 0.616056152 0.616196266 0.616126209 9.91E-05 Mcr FBtr0079543 8074115 8074955 2L - 8074780 8074841 3'utr Mcr FlyBase G8830.2 AGTTTTTTTGTTTGCCAACGAAATTGCATTCCGTCCAAAAATGCTGGTCAACATTTTGGTTT 5777 8074813 0.742386623 15 5720 31649 0.991896976 2.689879423 0.277239184 0.157348105 0.295615685 5777 43 13 6855 2L:8074780-8074841 8 Mcr FBtr0079543 8074115 8074955 TCCGTCCA 8mer-A1 dme-miR-184-3p 2L - 8074764 8074841 3'utr Mcr FlyBase G6862.1 AGTTTTTTTGTTTGCCAACGAAATTGCATTCCGTCCAAAAATGCTGGTCAACATTTTGGTTTTATTTTTAGTTCTTTT 3688 8074813 0.924325697 17 3625 19427 0.983850481 2.558068254 0.288332426 0.369577007 0.578116494 3688 75 14 5422 2L:8074764-8074841 8 4719 593 FBgn0267488 1127.406667 21.51 32.91333333 4.185712343 219.3863319 143.3765445 1 1 1 0.2 dme-miR-304-5p 7mer-m8 TGAGATT 2L 8109358 8109364 + 2L_8109358_8109364_+ 0.587095291 0.620028298 0.603561794 0.023287148 Bsg FBtr0079570|FBtr0079567|FBtr0079571|FBtr0079568|FBtr0079566|FBtr0079572|FBtr0079569|FBtr0079573 8107883|8107883|8107883|8107883|8107883|8107883|8107883|8107883 8109458|8109458|8116531|8116531|8109458|8109458|8109458|8109458 2L + 8109288 8109413 stop_codon Bsg FlyBase G2938.2 TGTATCTAGTATCTAAACACTTGTGCTATTCTCTACCGATTACAACTATCCATTATGATTTTGTGAGTTTTGAGATTGATTTCTACCGAAATATAAAACAAACAACAACAACAAAAAATACAATTG 182 8109358 0.985359599 23 171 1745 0.952380952 1.823908741 0.076190476 0.142857143 0.257142857 182 8 2 200 2L:8109288-8109413 7 Bsg FBtr0079569|FBtr0079573|FBtr0079566|FBtr0079572|FBtr0079571|FBtr0079568|FBtr0079570|FBtr0079567 8107883|8107883|8107883|8107883|8107883|8107883|8107883|8107883 8109458|8109458|8109458|8109458|8116531|8116531|8109458|8109458 TGAGATT 7mer-m8 dme-miR-304-5p 2L + 8109283 8109386 stop_codon Bsg FlyBase G2327.1 TTCTTTGTATCTAGTATCTAAACACTTGTGCTATTCTCTACCGATTACAACTATCCATTATGATTTTGTGAGTTTTGAGATTGATTTCTACCGAAATATAAAAC 113 8109358 0.871448912 26 110 1107 0.973856209 1.872156273 0.078431373 0.283185841 0.470588235 113 3 1 149 2L:8109283-8109386 7 83.5 594 FBgn0261822 8004.233333 323.89 495.0033333 0.01043198 0.257803575 0.168685733 0 0 0 0.2 dme-miR-252-5p 7mer-m8 GTACTTA 2L 8117339 8117345 - 2L_8117339_8117345_- 0.588222544 0.586825643 0.587524094 0.000987757 mon2 FBtr0339674|FBtr0301229 8117290|8116963 8117519|8117519 2L - 8117311 8117357 3'utr mon2 FlyBase G8843.1 CTAAGCATCTATGTACTTACATACATACCTAAACATATATATATATA 8 8117346 0.979569678 3 8 61 1 0.954242509 0 0.125 0.222222222 8 0 0 9 2L:8117311-8117357 7 mon2 FBtr0339674|FBtr0301229 8117290|8116963 8117519|8117519 GTACTTA 7mer-m8 dme-miR-252-5p 2L - 8117333 8117396 3'utr mon2 FlyBase G6869.1 GAATGTTAATCTTAGCCCTCCCTCGCATAGATGTAACGACTAAGCATCTATGTACTTACATACA 9 8117346 0.733078333 5 7 57 0.941176471 1.204119983 0.705882353 0.444444444 0.705882353 9 1 0 16 2L:8117333-8117396 7 6.5 595 FBgn0031985 610.5 12.61 19.26333333 0.010647011 0.515463918 0.337428621 1 1 1 0.2 dme-miR-1008-3p 7mer-m8 AGCTGTG 2L 8117463 8117469 - 2L_8117463_8117469_- 0.670878863 0.439149526 0.555014194 0.16385743 mon2 FBtr0339674|FBtr0301229 8117290|8116963 8117519|8117519 2L - 8117432 8117491 3'utr mon2 FlyBase G8844.1 AGTCCACATCCAGACTGGTGACAGCTGTGCGATGTTTTTCTTAGTTGTTTAAGCGCGAAC 6 8117459 0.929877148 4 6 37 1 0.954242509 0.333333333 0.5 0.666666667 6 0 0 9 2L:8117432-8117491 7 mon2 FBtr0339674|FBtr0301229 8117290|8116963 8117519|8117519 AGCTGTG 7mer-m8 dme-miR-1008-3p 2L - 8117455 8117556 stop_codon mon2 FlyBase G6870.2 AAACGACAATGTAATACAATCGAATGGACAAGAGTGAAAGTATGCCTAGACACAGACAGAGACCAAGTCCACATCCAGACTGGTGACAGCTGTGCGATGTTT 17 8117473 0.931438492 8 13 64 0.84375 1.130333768 0.4375 0.588235294 0.78125 17 4 1 27 2L:8117455-8117556 7 4 596 FBgn0031985 610.5 12.61 19.26333333 0.006552007 0.317208565 0.207648382 -10 4 -3 0.2 dme-miR-980-3p 8mer-A1 GGCAGCTA 2L 8133756 8133763 + 2L_8133756_8133763_+ 0.533028118 0.389785788 0.461406953 0.101287602 CG8668 FBtr0079576|FBtr0339671 8133642|8133642 8133989|8133989 2L + 8133461 8133862 stop_codon CG8668 FlyBase G2955.1 ACCACGGGCATAGTAGCCAAGAGCCTTAATGTTAAGCGGGTGCAGGCGAACGAGTTCGTTAACCGACGCATCTCATTTAACCCGTGCAACATCCGCAACGCAATCAGCGTGCACATGATCAAGTCGAACGAACAATTCGATTTGTGGAAAAAGCTGCTGGATCAGACCACCAAGTGTAAATAGTATTTTAAGTTTAGGGTGTAGTTTTTCCGGTATGAAGAACACAGTGTGGTCTTTCGAGAAAAAAGGGGCGAACATATATGTAATATGGTAGGAGTAGAGAATGATTAGCAAAGGCAGCTATATAGGATTATAAAATTAGACTAGTCTCTAAGTCCTAGAAATATCACAAATTCTGTTGTCGATCTCTGCATCCGCCTATATGCATGCGATCCAACAACG 527 8133748 0.899540704 58 483 3354 0.921221865 2.156094631 0.118971061 0.155597723 0.284565916 527 46 3 573 2L:8133461-8133862 8 CG8668 FBtr0079576|FBtr0339671 8133642|8133642 8133989|8133989 GGCAGCTA 8mer-A1 dme-miR-980-3p 2L + 8133704 8133880 3'utr CG8668 FlyBase G2342.2 AAAAGGGGCGAACATATATGTAATATGGTAGGAGTAGAGAATGATTAGCAAAGGCAGCTATATAGGATTATAAAATTAGACTAGTCTCTAAGTCCTAGAAATATCACAAATTCTGTTGTCGATCTCTGCATCCGCCTATATGCATGCGATCCAACAACGATTCGAGTACATTTTAAA 361 8133748 0.977729168 36 315 2289 0.897482014 1.795010559 0.120503597 0.376731302 0.595323741 361 50 7 499 2L:8133704-8133880 8 287.5 597 FBgn0031988 2594.666667 107.8333333 165.63 0.110804214 2.666151468 1.735796655 8 8 8 0.2 dme-miR-79-3p 7mer-A1 AGCTTTA 2L 8134398 8134404 - 2L_8134398_8134404_- 0.799552574 0.801500644 0.800526609 0.001377444 CG8552 FBtr0339673|FBtr0302595|FBtr0344863|FBtr0079641 8134245|8134245|8134245|8134245 8134622|8134622|8134622|8134622 2L - 8134308 8134424 3'utr CG8552 FlyBase G8873.1 AAAACCGTAGCAAGTTCTTGAGCTTTACAAAATTACCTATGTATTGATCGGATTGGCACCCATGAGACCTATTTGTTATTTTTGTAATATCGCCTGTGTAACAACTAACTTTGTAAC 37 8134406 0.971145721 11 36 275 0.979166667 1.672097858 0.104166667 0.243243243 0.416666667 37 1 0 47 2L:8134308-8134424 7 CG8552 FBtr0344863|FBtr0079641|FBtr0339673|FBtr0302595 8134245|8134245|8134245|8134245 8134622|8134622|8134622|8134622 AGCTTTA 7mer-A1 dme-miR-79-3p 2L - 8134305 8134424 3'utr CG8552 FlyBase G6888.1 AAAACCGTAGCAAGTTCTTGAGCTTTACAAAATTACCTATGTATTGATCGGATTGGCACCCATGAGACCTATTTGTTATTTTTGTAATATCGCCTGTGTAACAACTAACTTTGTAACATT 13 8134406 0.982793012 8 12 96 1 1.322219295 0.142857143 0.538461538 0.714285714 13 0 0 21 2L:8134305-8134424 7 13 598 FBgn0031990 1987.903333 36.46 55.94333333 0.006539553 0.356555129 0.232378002 2 2 2 0.2 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 818310 818317 - 2L_818310_818317_- 0.623971968 0.624245426 0.624108697 0.000193323 CG3876 FBtr0078039 818077 818506 2L - 818272 818375 3'utr CG3876 FlyBase G6659.1 GAGGGATTCCGAGAGGAGACGATTCAGTATGACAGGATCTGATGCATACACACGCTTTTAGCTTTAGGCTCTAACACGATTTTACACCTAAAGGATCTAGTTAA 243 818318 0.985040237 14 236 1911 0.966666667 2.115610512 0.22962963 0.090534979 0.181481481 243 8 1 261 2L:818272-818375 8 CG3876 FBtr0078039 818077 818506 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 818270 818376 3'utr CG3876 FlyBase G5208.1 CGAGGGATTCCGAGAGGAGACGATTCAGTATGACAGGATCTGATGCATACACACGCTTTTAGCTTTAGGCTCTAACACGATTTTACACCTAAAGGATCTAGTTAAAT 183 818318 0.894220167 17 178 1423 0.977198697 2.176091259 0.159609121 0.459016393 0.67752443 183 6 1 300 2L:818270-818376 8 170.5 599 FBgn0031284 55.33333333 4.87 7.336666667 3.081325301 35.01026694 23.23943662 1 1 1 0.2 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 8189487 8189492 + 2L_8189487_8189492_+ 0.652686248 0.975231126 0.813958687 0.228073686 Piezo FBtr0335176|FBtr0335178|FBtr0335182|FBtr0335183|FBtr0335175|FBtr0335177|FBtr0335180|FBtr0335179|FBtr0335181 8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128 8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137 2L + 8189483 8189518 3'utr Piezo FlyBase G2997.1 ATAATGATGAAAACTCATATTCAGGGAATTTAGCAT 8 8189502 0.727504568 2 5 50 0.75 0.954242509 0.083333333 0.5 0.666666667 8 3 0 9 2L:8189483-8189518 6 Piezo FBtr0335181|FBtr0335179|FBtr0335180|FBtr0335177|FBtr0335175|FBtr0335183|FBtr0335182|FBtr0335178|FBtr0335176 8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128 8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L + 8189479 8189516 3'utr Piezo FlyBase G2368.1 AATAATAATGATGAAAACTCATATTCAGGGAATTTAGC 7 8189489 0.825528972 3 6 43 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 2L:8189479-8189516 6 6 600 FBgn0264953 3209.976667 41.34 63.05333333 0.001869172 0.145137881 0.095157539 -15 -2 -8.5 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 2L 8189774 8189779 + 2L_8189774_8189779_+ 0.703841311 0.918767135 0.811304223 0.151975491 Piezo FBtr0335176|FBtr0335178|FBtr0335182|FBtr0335183|FBtr0335175|FBtr0335177|FBtr0335180|FBtr0335179|FBtr0335181 8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128 8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137 2L + 8189749 8189814 3'utr Piezo FlyBase G3000.1 CGATACATATTGCATATATAGAGCGTTGACTTTAGTTTTAGGCATATCACTTGACATATTTTTGTA 95 8189774 0.989815296 11 91 899 0.981818182 1.73239376 0.054545455 0.136842105 0.254545455 95 1 1 108 2L:8189749-8189814 6 Piezo FBtr0335181|FBtr0335179|FBtr0335180|FBtr0335177|FBtr0335175|FBtr0335183|FBtr0335182|FBtr0335178|FBtr0335176 8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128 8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137 TTGACT 6mer3-8 dme-miR-1012-3p 2L + 8189724 8189796 3'utr Piezo FlyBase G2370.1 ACTGTTTACTACTATATAACTAAATCGATACATATTGCATATATAGAGCGTTGACTTTAGTTTTAGGCATATC 52 8189774 0.789974715 11 50 462 0.975 1.892094603 0.025 0.384615385 0.6 52 2 0 78 2L:8189724-8189796 6 68.5 601 FBgn0264953 3209.976667 41.34 63.05333333 0.021339719 1.656990808 1.086381899 0 0 0 0.2 dme-bantam-3p 6mer3-8 TGATCT 2L 8192604 8192609 - 2L_8192604_8192609_- 0.96448269 0.944736617 0.954609654 0.013962601 CG8475 FBtr0079639 8190952 8194921 2L - 8192578 8192638 5'utr CG8475 FlyBase G8910.1 ATCGAGCATCTTGACTTTATGAACCAAAGTGATCTGACCGACAACGAGAATGCGTTCTCGC 37 8192605 0.786975908 7 36 140 0.977777778 1.643452676 0.111111111 0.189189189 0.333333333 37 1 0 44 2L:8192578-8192638 6 CG8475 FBtr0079639 8190952 8194921 TGATCT 6mer3-8 dme-bantam-3p 2L - 8192590 8192627 5'utr CG8475 FlyBase G6907.1 TGACTTTATGAACCAAAGTGATCTGACCGACAACGAGA 25 8192606 0.922985833 4 23 82 1 1.62324929 0.023809524 0.4 0.642857143 25 0 0 42 2L:8192590-8192627 6 28 602 FBgn0031995 561.1466667 16.95666667 25.92 0.049897828 1.651267938 1.080246914 -4 -3 -3.5 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 2L 8200319 8200325 + 2L_8200319_8200325_+ 0.520605797 0.516933496 0.518769646 0.002596708 PGAP5 FBtr0079587 8200280 8200652 2L + 8200304 8200394 3'utr PGAP5 FlyBase G3007.1 AGGCATATCCTCTTTTGTGATTTACGCCTGATTGGGGCTTAGTTTAGACTAGATACGCCAGATTCCAGACTCAGATCCCAGATCCAGATCC 77 8200325 0.77869604 14 72 714 0.934782609 1.633468456 0.336956522 0.142857143 0.282608696 77 5 1 86 2L:8200304-8200394 7 PGAP5 FBtr0079587 8200280 8200652 TGTGATT 7mer-m1 dme-miR-308-3p 2L + 8200303 8200358 3'utr PGAP5 FlyBase G2375.1 AAGGCATATCCTCTTTTGTGATTTACGCCTGATTGGGGCTTAGTTTAGACTAGATA 53 8200325 0.712634575 12 50 479 0.942028986 1.335792102 0.434782609 0.264150943 0.434782609 53 2 2 65 2L:8200303-8200358 7 52.5 603 FBgn0031997 251.1233333 19.52 29.58 0.209060621 2.68954918 1.77484787 -6 -6 -6 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 8200491 8200498 - 2L_8200491_8200498_- 0.640825884 0.638697816 0.63976185 0.001504794 SLC5A11 FBtr0079637|FBtr0079637|FBtr0079637 8200463|8200463|8200463 8200884|8200884|8200884 2L - 8200474 8200605 3'utr SLC5A11 FlyBase G8915.1 CTTTACTTTCCAGCCTTTGTTCAAGCATTATTTTTTTGGCATTTTCGATTTGTAGTCAGCAGACTGTGTCTCATTATGTATTCCGTTTGACTTTACAAGCATAATGTCTGTGATAAATTCAATAAATAGATC 96 8200500 0.985436533 17 87 760 0.923728814 1.736396502 0.110169492 0.1875 0.338983051 96 8 1 109 2L:8200474-8200605 8 SLC5A11 FBtr0079637|FBtr0079637|FBtr0079637 8200463|8200463|8200463 8200884|8200884|8200884 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 8200482 8200518 3'utr SLC5A11 FlyBase G6910.1 TGACTTTACAAGCATAATGTCTGTGATAAATTCAATA 45 8200500 0.711099359 8 39 342 0.884057971 1.785329835 0.057971014 0.333333333 0.565217391 45 8 0 61 2L:8200482-8200518 8 60 604 FBgn0031998 248.32 11.31333333 17.32 0.241623711 5.303476724 3.464203233 2 2 2 0.2 dme-miR-184-5p 6mer3-8 TGATAA 2L 8209669 8209674 - 2L_8209669_8209674_- 0.982553774 0.966964802 0.974759288 0.011023088 Su(var)205 FBtr0079636|FBtr0079635 8209624|8209624 8209834|8209834 2L - 8209625 8209707 3'utr Su(var)205 FlyBase G8917.1 TCCATAAATGTCCAGAGTCAGTGTCTGTATTTATGATAACCATTTTCAATAAATAAAAAAAACCTTTATTCTGCTGGAGCCTA 18 8209664 0.676731094 12 18 127 1 1.431363764 0.333333333 0.333333333 0.555555556 18 0 0 27 2L:8209625-8209707 6 Su(var)205 FBtr0079635|FBtr0079636 8209624|8209624 8209834|8209834 TGATAA 6mer3-8 dme-miR-184-5p 2L - 8209625 8209688 3'utr Su(var)205 FlyBase G6914.1 AGTGTCTGTATTTATGATAACCATTTTCAATAAATAAAAAAAACCTTTATTCTGCTGGAGCCTA 10 8209676 0.98210971 6 10 75 1 1.176091259 0 0.4 0.6 10 0 0 15 2L:8209625-8209688 6 7.5 605 FBgn0003607 3176.68 396.8566667 605.5133333 0.002360955 0.018898511 0.012386185 -10 2 -4 0.2 dme-miR-14-3p 6mer2-7 AGACTG 2L 820991 820996 + 2L_820991_820996_+ 0.705854617 0.751919406 0.728887011 0.032572732 Clp FBtr0078011 820968 821209 2L + 820964 821017 stop_codon Clp FlyBase G895.1 AAGTAGGACGCTCTGCTCTGTATGATTAGACTGTAAGAGTGCAGAAATAAAGGT 13 820989 0.980649326 4 13 100 1 1.113943352 0.538461538 0 0 13 0 0 13 2L:820964-821017 6 Clp FBtr0078011 820968 821209 AGACTG 6mer2-7 dme-miR-14-3p 2L + 820964 821008 stop_codon Clp FlyBase G714.1 AAGTAGGACGCTCTGCTCTGTATGATTAGACTGTAAGAGTGCAGA 9 820989 0.976518707 3 9 64 1 1.113943352 0.384615385 0.444444444 0.615384615 9 0 0 13 2L:820964-821008 6 11 606 FBgn0015621 194.6666667 19.23666667 29.43666667 0.056506849 0.57182464 0.373683615 2 2 2 0.2 dme-miR-277-3p 7mer-m8 TGCATTT 2L 821129 821135 + 2L_821129_821135_+ 0.617451591 0.617592128 0.61752186 9.93E-05 Clp FBtr0078011 820968 821209 2L + 821046 821190 3'utr Clp FlyBase G896.1 AGTCCAGAGGTCGTAGGTTCCCAACTTCCGCAGGCGAACGTTTCAATCATTCTGTGTTTAAAGTGTATGTTAAGAAACTCATTTGCATTTTTGAAAAAAGTCCCTAGAACTGCCAGTAGAACGTATTGTGTTATCAGCGAAATAA 54 821128 0.839590949 13 49 388 0.915254237 1.255272505 0.338983051 0.092592593 0.169491525 54 3 2 54 2L:821046-821190 7 Clp FBtr0078011 820968 821209 TGCATTT 7mer-m8 dme-miR-277-3p 2L + 821049 821185 3'utr Clp FlyBase G715.1 CCAGAGGTCGTAGGTTCCCAACTTCCGCAGGCGAACGTTTCAATCATTCTGTGTTTAAAGTGTATGTTAAGAAACTCATTTGCATTTTTGAAAAAAGTCCCTAGAACTGCCAGTAGAACGTATTGTGTTATCAGCGA 44 821128 0.987021857 8 41 359 0.920634921 1.462397998 0.349206349 0.318181818 0.523809524 44 4 1 58 2L:821049-821185 7 21 607 FBgn0015621 194.6666667 19.23666667 29.43666667 0.107876712 1.091665223 0.713395991 1 1 1 0.2 dme-miR-277-3p 7mer-m8 TGCATTT 2L 8218103 8218109 - 2L_8218103_8218109_- 0.536703255 0.509967426 0.52333534 0.018905136 Snx6 FBtr0079631|FBtr0306170 8218069|8218069 8218410|8218410 2L - 8218050 8218194 3'utr Snx6 FlyBase G8936.1 GTTTTGTGAACAGAGCGCTTTTATATTTGTCAAACAAGCATTCCTCTCTACAGCATAAACTACAACTACATATATTGTAAACACTTGCATTTGAAGCAGAATATAAACGAGAAATATTGTACAGAAGGCTGGCTGTTTGTGAGCA 85 8218110 0.928082335 17 81 538 0.981481481 1.548184611 0.12962963 0.2 0.37037037 85 0 2 106 2L:8218050-8218194 7 Snx6 FBtr0079631|FBtr0306170 8218069|8218069 8218410|8218410 TGCATTT 7mer-m8 dme-miR-277-3p 2L - 8218059 8218150 3'utr Snx6 FlyBase G6935.1 TCTCTACAGCATAAACTACAACTACATATATTGTAAACACTTGCATTTGAAGCAGAATATAAACGAGAAATATTGTACAGAAGGCTGGCTGT 39 8218110 0.95960387 6 34 240 0.886792453 1.371067862 0.075471698 0.333333333 0.509433962 39 5 1 47 2L:8218059-8218150 7 35 608 FBgn0032005 1985.913333 134.4066667 205.9133333 0.017624133 0.26040375 0.169974423 1 1 1 0.2 dme-miR-318-3p 6mer2-7 CCAGTG 2L 824367 824372 - 2L_824367_824372_- 0.756366656 0.999065219 0.877715937 0.171613755 CG3862 FBtr0078038 824327 824432 2L - 824353 824419 3'utr CG3862 FlyBase G6664.1 TTTTAGATTAGTTAACTTAAAGTATACTCTAGTCGAAAATACTATTGCCAGTGGCAGCCCAACCAAT 30 824393 0.978085751 9 25 174 0.80952381 0.753327667 0.047619048 0.2 0.428571429 30 3 5 34 2L:824353-824419 6 CG3862 FBtr0078038 824327 824432 CCAGTG 6mer2-7 dme-miR-318-3p 2L - 824355 824412 3'utr CG3862 FlyBase G5212.1 TTAGTTAACTTAAAGTATACTCTAGTCGAAAATACTATTGCCAGTGGCAGCCCAACCA 14 824375 0.978881592 8 11 79 0.826086957 0.977723605 0 0.5 0.695652174 14 3 1 19 2L:824355-824412 6 7.5 609 FBgn0031286 219 17.47666667 26.73666667 0.034246575 0.42914362 0.280513652 21 3 12 0.2 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2L 8259591 8259597 - 2L_8259591_8259597_- 0.802860262 0.80841365 0.805636956 0.003926847 Btk29A FBtr0330693|FBtr0330693|FBtr0330692|FBtr0330692|FBtr0079618|FBtr0079618|FBtr0079615|FBtr0079615|FBtr0112835|FBtr0112835|FBtr0112836|FBtr0112836|FBtr0079617|FBtr0079617 8259503|8259503|8259503|8259503|8258753|8258753|8259503|8259503|8259503|8259503|8258371|8258371|8259503|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537 2L - 8259578 8259607 3'utr Btk29A FlyBase G8997.1 ATGAACGTTTTACTTAATTAATTTTATCAT 9 8259599 0.818557822 2 9 112 1 1.041392685 0.636363636 0.222222222 0.363636364 9 0 0 11 2L:8259578-8259607 7 Btk29A FBtr0112836|FBtr0112836|FBtr0079617|FBtr0079617|FBtr0079615|FBtr0079615|FBtr0112835|FBtr0112835|FBtr0079618|FBtr0079618|FBtr0330693|FBtr0330693|FBtr0330692|FBtr0330692 8258371|8258371|8259503|8259503|8259503|8259503|8259503|8259503|8258753|8258753|8259503|8259503|8259503|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2L - 8259580 8259608 3'utr Btk29A FlyBase G6987.1 TATGAACGTTTTACTTAATTAATTTTATC 7 8259599 0.725815484 3 6 82 0.888888889 0.903089987 0.333333333 0.285714286 0.444444444 7 1 0 8 2L:8259580-8259608 7 8 610 FBgn0003502 699.44 22.40333333 34.31333333 0.011437722 0.357089719 0.233145522 2 2 2 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 2L 8259816 8259822 - 2L_8259816_8259822_- 0.514428331 0.517607372 0.516017852 0.002247963 Btk29A FBtr0330693|FBtr0330692|FBtr0079618|FBtr0079615|FBtr0112835|FBtr0112836|FBtr0079617 8259503|8259503|8258753|8259503|8259503|8258371|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537 2L - 8259790 8260037 3'utr Btk29A FlyBase G9000.1 GTGCTAAGTAAAATATGATTATCTCTAAAGAATGATAGAAACAAACAAACAAGAAAACTGATTATGCATTAAATATTAAATGTAAGCCTCAAGTCGAAAGCGAAATGTTTGCACAACTGATAAAGGATGAAGGAACCGAAGGATGATAAGAAAAGAGTTCGCCAAGAAACATAAACGATTTTTAGACTAGATTTGTACGTGCGTAGTTTAAGTTTTGTGATTTATTGTTTAATTCTTGCAGACGATTT 516 8259816 0.98641716 35 504 6584 0.968152866 1.938805539 0.643312102 0.158914729 0.308917197 516 14 6 608 2L:8259790-8260037 7 Btk29A FBtr0112836|FBtr0079617|FBtr0079615|FBtr0112835|FBtr0079618|FBtr0330693|FBtr0330692 8258371|8259503|8259503|8259503|8258753|8259503|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 8259778 8259865 3'utr Btk29A FlyBase G6988.1 AAACGATTTTTAGACTAGATTTGTACGTGCGTAGTTTAAGTTTTGTGATTTATTGTTTAATTCTTGCAGACGATTTTTATTTTTATTT 409 8259816 0.994162455 17 405 5327 0.988906498 2.318063335 0.703645008 0.393643032 0.606973059 409 5 2 624 2L:8259778-8259865 7 430.5 611 FBgn0003502 699.44 22.40333333 34.31333333 0.615492394 19.21589049 12.54614338 -6 -6 -6 0.2 dme-miR-283-5p 6mer3-8 TGATAT 2L 8260274 8260279 - 2L_8260274_8260279_- 0.911718509 0.960429853 0.936074181 0.034444161 Btk29A FBtr0330693|FBtr0330692|FBtr0079616|FBtr0079618|FBtr0079615|FBtr0112835|FBtr0112836|FBtr0079617 8259503|8259503|8260069|8258753|8259503|8259503|8258371|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537 2L - 8260242 8260307 3'utr Btk29A FlyBase G9002.1 TTATATGATAGAGCTAGAGCTGAGCAAATGATATCATTATGTTTATGAACGCGTTAACTGTTAGAC 108 8260279 0.854810623 10 103 726 0.953488372 1.788875116 0.255813953 0.157407407 0.294573643 108 5 1 123 2L:8260242-8260307 6 Btk29A FBtr0112836|FBtr0079617|FBtr0079615|FBtr0112835|FBtr0079616|FBtr0079618|FBtr0330693|FBtr0330692 8258371|8259503|8259503|8259503|8260069|8258753|8259503|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537 TGATAT 6mer3-8 dme-miR-283-5p 2L - 8260258 8260311 3'utr Btk29A FlyBase G6991.1 TGGATTATATGATAGAGCTAGAGCTGAGCAAATGATATCATTATGTTTATGAAC 69 8260279 0.8334676 9 66 433 0.91588785 1.088136089 0.392523364 0.405797101 0.61682243 69 2 7 98 2L:8260258-8260311 6 80.5 612 FBgn0003502 699.44 22.40333333 34.31333333 0.115092074 3.593215295 2.346026812 0 0 0 0.2 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA 2L 8260458 8260465 - 2L_8260458_8260465_- 0.562427567 0.408073515 0.485250541 0.109144831 Btk29A FBtr0330693|FBtr0330692|FBtr0079616|FBtr0079618|FBtr0079615|FBtr0112835|FBtr0112836|FBtr0079617 8259503|8259503|8260069|8258753|8259503|8259503|8258371|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537 2L - 8260420 8260537 3'utr Btk29A FlyBase G9004.1 GGAGCGGACCAGATTGCGGCACCCATCGCCTGAAATTAACACGCACTGAACACACTGAAGCATCTTAAGATATTGAAGAACGTTAAAGGCATTACATTTAAGGTTACAAAAGCGGCGA 29 8260482 0.958395383 15 27 141 0.933333333 1.146128036 0.266666667 0.034482759 0.066666667 29 1 1 28 2L:8260420-8260537 8 Btk29A FBtr0112836|FBtr0079617|FBtr0079615|FBtr0112835|FBtr0079616|FBtr0079618|FBtr0330693|FBtr0330692 8258371|8259503|8259503|8259503|8260069|8258753|8259503|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p 2L - 8260431 8260539 stop_codon Btk29A FlyBase G6992.1 AAGGAGCGGACCAGATTGCGGCACCCATCGCCTGAAATTAACACGCACTGAACACACTGAAGCATCTTAAGATATTGAAGAACGTTAAAGGCATTACATTTAAGGTTAC 24 8260482 0.958808004 10 19 95 0.857142857 1.176091259 0.2 0.375 0.571428571 24 4 1 30 2L:8260431-8260539 8 9 613 FBgn0003502 699.44 22.40333333 34.31333333 0.012867437 0.401725934 0.262288712 17 17 17 0.2 dme-miR-276a-3p 7mer-A1 GTTCCTA 2L 8316765 8316771 + 2L_8316765_8316771_+ 0.75886017 0.763648908 0.761254539 0.003386122 CG7806 FBtr0079600 8316672 8317011 2L + 8316735 8316784 3'utr CG7806 FlyBase G3042.1 ATTACTTTGTTTAATTTTTATCATACTTGTGTTCCTAACTAACAATTCCA 80 8316761 0.775187002 6 79 830 0.979166667 1.496006599 0 0.175 0.3125 80 0 2 94 2L:8316735-8316784 7 CG7806 FBtr0079600 8316672 8317011 GTTCCTA 7mer-A1 dme-miR-276a-3p 2L + 8316736 8316782 3'utr CG7806 FlyBase G2399.1 TTACTTTGTTTAATTTTTATCATACTTGTGTTCCTAACTAACAATTC 54 8316761 0.947220572 5 52 531 0.972972973 1.857332496 0 0.277777778 0.472972973 54 2 0 72 2L:8316736-8316782 7 66.5 614 FBgn0032018 954.6066667 23.09666667 35.38666667 0.069662199 2.879203348 1.879238885 4 4 4 0.2 dme-miR-304-5p 8mer-A1 TGAGATTA 2L 8317181 8317188 - 2L_8317181_8317188_- 0.623022918 0.58343007 0.603226494 0.027996337 mtsh FBtr0301169 8316887 8317538 2L - 8317171 8317225 stop_codon mtsh FlyBase G9035.1 TTCAACTATGAAATCTAAGTGAAAAAGTATTGACGGTTGAGATTATCAACTGAAA 11 8317188 0.742529854 5 10 65 0.923076923 1.079181246 0 0.090909091 0.230769231 11 1 0 12 2L:8317171-8317225 8 mtsh FBtr0301169|FBtr0301170 8316887|8316887 8317538|8317207 TGAGATTA 8mer-A1 dme-miR-304-5p 2L - 8317171 8317264 stop_codon mtsh FlyBase G7016.1 CAGTTTGATCACATCATGGGCAGGCCAGGCGAAAAGCTCTTCAACTATGAAATCTAAGTGAAAAAGTATTGACGGTTGAGATTATCAACTGAAA 13 8317189 0.970752231 6 11 72 1 1.204119983 0.25 0.230769231 0.375 13 0 0 16 2L:8317171-8317264 8 5 615 FBgn0262598 6.67 0.32 0.476666667 0.749625187 15.625 10.48951049 0 1 0.5 0.2 dme-bantam-3p 7mer-m8 TGATCTC 2L 8317316 8317322 - 2L_8317316_8317322_- 0.648694601 0.651312131 0.650003366 0.001850852 mtsh FBtr0301169 8316887 8317538 2L - 8317293 8317351 3'utr mtsh FlyBase G9036.1 TACACGGACGAGAACCTCCTCTACTACATTGATCTCTACGAGCGCTCTGTGAACGACAT 298 8317323 0.965429051 10 291 2147 0.973760933 2.222716471 0.049562682 0.127516779 0.241982507 298 8 1 334 2L:8317293-8317351 7 mtsh FBtr0301169 8316887 8317538 TGATCTC 7mer-m8 dme-bantam-3p 2L - 8317290 8317349 3'utr mtsh FlyBase G7017.1 CACGGACGAGAACCTCCTCTACTACATTGATCTCTACGAGCGCTCTGTGAACGACATGCT 180 8317323 0.840018044 10 173 1259 0.962199313 2.447158031 0.06185567 0.405555556 0.632302405 180 11 0 280 2L:8317290-8317349 7 229.5 616 FBgn0262598 6.67 0.32 0.476666667 34.4077961 717.1875 481.4685315 1 1 1 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 832022 832028 + 2L_832022_832028_+ 0.657492823 0.656647965 0.657070394 0.000597364 dock FBtr0332973|FBtr0078013|FBtr0078014|FBtr0078015 831922|831922|831922|831922 832331|833241|833241|833241 2L + 831979 832091 3'utr dock FlyBase G911.1 AACACACATATGCAACACAAAGATATACCAAGGCTAACTTGTAGGCAGCTCAGCTCAGCGCGACGTGTAGTTCAATATAGTTCGGTTTGGATATTTAATTATGGACTCAGTTT 38 832019 0.850271694 9 37 216 0.975609756 1.602059991 0.268292683 0.078947368 0.146341463 38 1 0 40 2L:831979-832091 7 dock FBtr0332973|FBtr0078013|FBtr0078014|FBtr0078015 831922|831922|831922|831922 832331|833241|833241|833241 GGCAGCT 7mer-m8 dme-miR-980-3p 2L + 831974 832042 3'utr dock FlyBase G727.1 TCAACAACACACATATGCAACACAAAGATATACCAAGGCTAACTTGTAGGCAGCTCAGCTCAGCGCGAC 13 832019 0.958801057 5 13 62 1 1.301029996 0.2 0.538461538 0.7 13 0 0 20 2L:831974-832042 7 17 617 FBgn0010583 684.1466667 22.6 34.75 0.024848473 0.752212389 0.489208633 3 3 3 0.2 dme-miR-283-5p 6mer3-8 TGATAT 2L 832694 832699 + 2L_832694_832699_+ 0.835029941 0.998859579 0.91694476 0.115845092 dock FBtr0078013|FBtr0078014|FBtr0078015 831922|831922|831922 833241|833241|833241 2L + 832675 832742 3'utr dock FlyBase G913.1 AAAACAAAACAAATACACTTGATATCTCCGCGCGGAGTCTGCTCCCCGCATTATTATAAACATAATCT 48 832694 0.861152199 7 46 247 0.966101695 1.755874856 0.084745763 0.229166667 0.372881356 48 2 0 57 2L:832675-832742 6 dock FBtr0078013|FBtr0078014|FBtr0078015 831922|831922|831922 833241|833241|833241 TGATAT 6mer3-8 dme-miR-283-5p 2L + 832675 832725 3'utr dock FlyBase G729.1 AAAACAAAACAAATACACTTGATATCTCCGCGCGGAGTCTGCTCCCCGCAT 27 832694 0.944894295 7 25 141 0.860465116 1.568201724 0.186046512 0.37037037 0.604651163 27 6 0 37 2L:832675-832725 6 30 618 FBgn0010583 684.1466667 22.6 34.75 0.043850247 1.327433628 0.863309353 0 0 0 0.2 dme-miR-980-5p 7mer-A1 AAAAACA 2L 833599 833605 - 2L_833599_833605_- 0.781832887 0.782851578 0.782342233 0.00072033 drongo FBtr0302121|FBtr0302612|FBtr0078037|FBtr0302120 833582|833582|833585|833582 834544|834544|834544|834544 2L - 833595 833656 3'utr drongo FlyBase G6668.1 TGTCAAACATTATCGAAGCCTTAAAGTTATTTAAAACTACGAAATTTCAATAAAAACAAATA 14 833635 0.736506047 9 14 91 1 1.278753601 0.210526316 0.214285714 0.421052632 14 0 0 19 2L:833595-833656 7 drongo FBtr0078037|FBtr0302120|FBtr0302121|FBtr0302612 833585|833582|833582|833582 834544|834544|834544|834544 AAAAACA 7mer-A1 dme-miR-980-5p 2L - 833600 833657 3'utr drongo FlyBase G5214.1 GTGTCAAACATTATCGAAGCCTTAAAGTTATTTAAAACTACGAAATTTCAATAAAAAC 14 833612 0.75494106 8 14 85 1 1.447158031 0.178571429 0.642857143 0.821428571 14 0 0 28 2L:833600-833657 5 4 619 FBgn0020304 1071.886667 39.91333333 61.24666667 0.003731738 0.100217137 0.065309677 30 7 18.5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 833930 833935 - 2L_833930_833935_- 0.856248096 0.923070303 0.889659199 0.047250431 drongo FBtr0302121|FBtr0302612|FBtr0078037|FBtr0302120 833582|833582|833585|833582 834544|834544|834544|834544 2L - 833876 833976 3'utr drongo FlyBase G6671.1 AGACACAGTTAGTACAGATACAGATATACATATACGCTTTTGTACCTAATGAATTGCTTCTTGTTTCCATTGCTAATCATCTGCTTTTCGTGTGCTAATTT 430 833936 0.68117376 18 422 3683 0.980988593 2.411619706 0.053231939 0.181395349 0.330798479 430 9 1 516 2L:833876-833976 6 drongo FBtr0078037|FBtr0302120|FBtr0302121|FBtr0302612 833585|833582|833582|833582 834544|834544|834544|834544 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L - 833910 834018 3'utr drongo FlyBase G5217.1 TATAACGTACGACTATACATATACGGATACAGATACAGATTCAGACACAGTTAGTACAGATACAGATATACATATACGCTTTTGTACCTAATGAATTGCTTCTTGTTTC 293 833936 0.852298231 18 281 2332 0.972157773 2.145092768 0.053364269 0.348122867 0.556844548 293 10 2 419 2L:833910-834018 6 342 620 FBgn0020304 1071.886667 39.91333333 61.24666667 0.319063583 8.568565225 5.583977359 1 1 1 0.2 dme-bantam-3p 6mer3-8 TGATCT 2L 8378334 8378339 - 2L_8378334_8378339_- 0.979188403 0.63807022 0.808629311 0.241206992 Aats-ala FBtr0079721|FBtr0079722 8378260|8378260 8378418|8378418 2L - 8378274 8378394 3'utr Aats-ala FlyBase G9076.1 AAGACCTTCAATTACTCACAATTTTGATACACAACTATGCTTAATCTTAATCCGTTGATCTGTTTTAAACAGCATTTCAGATGAATTTTTACGGCTATTTATAAAATAAAAGCATTTATAC 25 8378338 0.982779873 14 24 190 0.941176471 1.505149978 0.088235294 0.28 0.470588235 25 2 0 32 2L:8378274-8378394 6 Aats-ala FBtr0079722|FBtr0079721 8378260|8378260 8378418|8378418 TGATCT 6mer3-8 dme-bantam-3p 2L - 8378328 8378399 3'utr Aats-ala FlyBase G7040.1 GCGGCAAGACCTTCAATTACTCACAATTTTGATACACAACTATGCTTAATCTTAATCCGTTGATCTGTTTTA 13 8378369 0.984157154 7 13 103 1 1.278753601 0.210526316 0.307692308 0.526315789 13 0 0 19 2L:8378328-8378399 6 6 621 FBgn0027094 1216.56 46.45 71.26333333 0.004931939 0.129171152 0.084194771 -1 30 14.5 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 2L 8388308 8388314 + 2L_8388308_8388314_+ 0.518328569 0.51653771 0.517433139 0.001266358 CG13384 FBtr0303469|FBtr0303468|FBtr0079655|FBtr0303470|FBtr0303467|FBtr0079658|FBtr0079653|FBtr0079657|FBtr0079654|FBtr0079656|FBtr0303471 8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134 8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804 2L + 8388119 8388333 stop_codon CG13384 FlyBase G3111.1 ACGACAGAACCCACTGAGTTTAATCGAAATAAGCGAATCGAAAACAGAACCTGGCTAGTTCTGCCTACAAATGTGTGCGAATTTATGACGAAGGCTTTATGTAGTTACACTCAGACTACGAATATGTTTACCATTAGTTGTTTACCATTTCCCAACTGGTATCGGTCCAGTCCAGTGGCGGTGCTTTAGTGTGATTAATTTATATTTATGGCAAA 396 8388304 0.959942088 39 386 2771 0.977505112 2.202306642 0.355828221 0.191919192 0.345603272 396 9 2 478 2L:8388119-8388333 7 CG13384 FBtr0303467|FBtr0079655|FBtr0303468|FBtr0303469|FBtr0303471|FBtr0303470|FBtr0079656|FBtr0079657|FBtr0079654|FBtr0079658|FBtr0079653 8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134 8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804 TGTGATT 7mer-m1 dme-miR-308-3p 2L + 8388267 8388329 3'utr CG13384 FlyBase G2454.2 TTCCCAACTGGTATCGGTCCAGTCCAGTGGCGGTGCTTTAGTGTGATTAATTTATATTTATGG 257 8388304 0.681702752 15 249 1796 0.97721519 2.10946605 0.432911392 0.373540856 0.592405063 257 7 2 386 2L:8388267-8388329 7 158 622 FBgn0032036 4208.186667 203.2133333 311 0.037545863 0.777508038 0.508038585 4 4 4 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 8412226 8412233 - 2L_8412226_8412233_- 0.47837163 0.480164068 0.479267849 0.001267489 CG13398 FBtr0331990 8412142 8413550 2L - 8412158 8412255 3'utr CG13398 FlyBase G9111.1 ATGAATGTTCTTTCGTTTACATGTACTTAAAATCGCTGCTTAGTCGGCGGCATAAACTAAATTATTGTTAGTGTCTAAGACGAAATACGTGCAATAAA 207 8412234 0.989014861 8 201 1909 0.963855422 2.380211242 0.297188755 0.164251208 0.305220884 207 9 0 240 2L:8412158-8412255 8 CG13398 FBtr0331990 8412142 8413550 GTACTTAA 8mer-A1 dme-miR-252-5p 2L - 8412202 8412255 3'utr CG13398 FlyBase G7070.1 ATGAATGTTCTTTCGTTTACATGTACTTAAAATCGCTGCTTAGTCGGCGGCATA 164 8412234 0.813761594 5 149 1436 0.920704846 1.718086295 0.268722467 0.298780488 0.49339207 164 15 3 209 2L:8412202-8412255 8 183.5 623 FBgn0032042 445.3533333 18.47333333 28.30333333 0.412032394 9.933237099 6.483335296 1 1 1 0.2 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 8412354 8412360 - 2L_8412354_8412360_- 0.818001879 0.818980714 0.818491297 0.000692116 CG13398 FBtr0331990 8412142 8413550 2L - 8412341 8412400 3'utr CG13398 FlyBase G9113.1 AAAAAAAAACAATGGTAGAAAGCATCGCGTTGCATTGTCCGCTGTGAGTTTATAATTTTT 35 8412365 0.98317773 8 31 285 0.909090909 1.602059991 0.295454545 0.257142857 0.409090909 35 4 0 40 2L:8412341-8412400 7 CG13398 FBtr0331990 8412142 8413550 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L - 8412281 8412383 3'utr CG13398 FlyBase G7071.1 GAAAGCATCGCGTTGCATTGTCCGCTGTGAGTTTATAATTTTTTACATATATATATCGCTGAATTGTTATTCAATTTGTTAGGAGTTATATACACTGAGCATT 23 8412365 0.979078631 11 21 203 0.864864865 1.505149978 0.27027027 0.434782609 0.648648649 23 5 0 32 2L:8412281-8412383 7 22.5 624 FBgn0032042 445.3533333 18.47333333 28.30333333 0.050521683 1.217971851 0.794959369 5 5 5 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2L 8412803 8412809 - 2L_8412803_8412809_- 0.816551572 0.788609732 0.802580652 0.019757907 CG13398 FBtr0079710|FBtr0331990 8412409|8412142 8413550|8413550 2L - 8412799 8412860 3'utr CG13398 FlyBase G9116.1 CGAATTTACTGCACGAGATTGTGGTAAAGTGAAATTTGAAGAGTGATTTGTCCAAAGATATG 13 8412812 0.988896323 5 10 88 0.846153846 0.740362689 0.615384615 0.083333333 0.153846154 12 1 1 11 2L:8412799-8412860 7 CG13398 FBtr0331990|FBtr0079710 8412142|8412409 8413550|8413550 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 8412799 8412859 3'utr CG13398 FlyBase G7073.1 GAATTTACTGCACGAGATTGTGGTAAAGTGAAATTTGAAGAGTGATTTGTCCAAAGATATG 13 8412813 0.864836602 5 12 83 1 1.380211242 0.333333333 0.461538462 0.708333333 13 0 0 24 2L:8412799-8412859 7 8 625 FBgn0032042 445.3533333 18.47333333 28.30333333 0.017963265 0.433056658 0.28265222 3 4 3.5 0.2 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 8430814 8430819 + 2L_8430814_8430819_+ 0.5130475 0.486772354 0.499909927 0.018579301 Akap200 FBtr0079665|FBtr0340241|FBtr0079667|FBtr0340239|FBtr0340240|FBtr0079666 8430366|8430366|8430366|8430366|8430366|8430366 8430977|8430977|8430977|8430977|8431297|8430977 2L + 8430787 8430973 3'utr Akap200 FlyBase G3176.1 ACAAGCGCATACATACCATTCTCATATTGATGATCTTGATAGCGAAAGAATCAACAAATCATATACGATGAAATGATGAAAGTGAGGAGAATTTTTTGAATAATTTCTACTATACATTTAACTGTAAGTTCGAAGAAATTTGTAAAGAATTTTTGGACGAAATATTGGATAAAATATATATTATAAA 302 8430817 0.734427636 34 293 2478 0.970430108 2.080385947 0.301075269 0.195364238 0.346774194 302 9 2 361 2L:8430787-8430973 6 Akap200 FBtr0079667|FBtr0340241|FBtr0079665|FBtr0079666|FBtr0340240|FBtr0340239 8430366|8430366|8430366|8430366|8430366|8430366 8430977|8430977|8430977|8430977|8431297|8430977 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L + 8430767 8430891 3'utr Akap200 FlyBase G2513.1 AAGCACACACCATCCACCACACAAGCGCATACATACCATTCTCATATTGATGATCTTGATAGCGAAAGAATCAACAAATCATATACGATGAAATGATGAAAGTGAGGAGAATTTTTTGAATAATT 181 8430817 0.987804543 18 168 1510 0.928030303 1.91204483 0.337121212 0.342541436 0.549242424 181 17 2 245 2L:8430767-8430891 6 204 626 FBgn0027932 6995.416667 397.1466667 611.3966667 0.029161951 0.513664138 0.333662271 -3 -3 -3 0.2 dme-miR-8-3p 6mer2-7 AGTATT 2L 8437951 8437956 + 2L_8437951_8437956_+ 0.785188233 0.55107402 0.668131127 0.165543738 Chrac-14 FBtr0100268 8437890 8437996 2L + 8437910 8437966 3'utr Chrac-14 FlyBase G3178.1 ATACGGATCAATTATCCTCTTCAGTCATTAAGAACAAAGCTAGTATTGAGCATTAAC 15 8437929 0.69558085 6 15 107 1 1.397940009 0 0.266666667 0.56 15 0 0 25 2L:8437910-8437966 6 Chrac-14 FBtr0100268 8437890 8437996 AGTATT 6mer2-7 dme-miR-8-3p 2L + 8437917 8437967 3'utr Chrac-14 FlyBase G2515.1 TCAATTATCCTCTTCAGTCATTAAGAACAAAGCTAGTATTGAGCATTAACA 11 8437955 0.955922003 5 11 55 1 1.230448921 0 0.454545455 0.647058824 11 0 0 17 2L:8437917-8437967 6 7 627 FBgn0043002 655.4866667 147.0666667 225.6233333 0.010679088 0.047597461 0.03102516 22 -4 9 0.2 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 8449759 8449766 - 2L_8449759_8449766_- 0.624168 0.623727201 0.6239476 0.000311693 fu12 FBtr0079703|FBtr0302160|FBtr0079704|FBtr0340242 8449689|8449689|8449689|8449689 8450088|8450088|8450088|8450088 2L - 8449702 8449787 3'utr fu12 FlyBase G9139.1 TAAGCGCATTTGTTGGATGTTTAGCTTTATGCAAATATTGTATTGATTTATATGTGAATAATGAAATGAGACCTATTTAATAAAAC 60 8449767 0.79673289 15 59 543 0.977272727 1.934498451 0.136363636 0.3 0.522727273 60 2 0 86 2L:8449702-8449787 8 fu12 FBtr0079703|FBtr0302160|FBtr0079704|FBtr0340242 8449689|8449689|8449689|8449689 8450088|8450088|8450088|8450088 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 8449689 8449786 3'utr fu12 FlyBase G7086.1 AAGCGCATTTGTTGGATGTTTAGCTTTATGCAAATATTGTATTGATTTATATGTGAATAATGAAATGAGACCTATTTAATAAAACATTTTGCACTGAA 46 8449767 0.98977421 11 45 441 0.986842105 1.875061263 0.25 0.434782609 0.657894737 46 1 0 75 2L:8449689-8449786 8 40.5 628 FBgn0026718 82 6.056666667 9.28 0.493902439 6.68684645 4.364224138 1 1 1 0.2 dme-miR-184-3p 7mer-m8 TCCGTCC 2L 8490388 8490394 + 2L_8490388_8490394_+ 0.661607658 0.661615236 0.661611447 5.30E-06 CG13088 FBtr0079681 8490347 8490546 2L + 8490368 8490403 3'utr CG13088 FlyBase G3203.1 AAATGACATTTCTACCTCAATCCGTCCGGTATACGA 16 8490388 0.724762169 4 14 112 0.894736842 1.230448921 0 0.1875 0.315789474 16 2 0 17 2L:8490368-8490403 7 CG13088 FBtr0079681 8490347 8490546 TCCGTCC 7mer-m8 dme-miR-184-3p 2L + 8490367 8490400 3'utr CG13088 FlyBase G2532.1 TAAATGACATTTCTACCTCAATCCGTCCGGTATA 22 8490397 0.699608806 5 19 149 0.875 1.322219295 0 0.090909091 0.166666667 22 3 0 21 2L:8490367-8490400 7 19 629 FBgn0032047 48.33333333 4.033333333 6.113333333 0.393103448 4.710743802 3.107960742 0 -9 -4.5 0.2 dme-miR-932-5p 6mer3-8 GGAATT 2L 8512258 8512263 - 2L_8512258_8512263_- 0.341396551 0.509948774 0.425672663 0.119184404 CG13097 FBtr0079697 8512172 8512592 2L - 8512223 8512282 3'utr CG13097 FlyBase G9162.1 AGGCACGCGTGCAGCTTGCGGAATTTGACTATTCTTAGAATTATTTACTTAAAATAACTG 14 8512250 0.982134883 7 14 112 1 1.176091259 0.333333333 0.071428571 0.133333333 14 0 0 15 2L:8512223-8512282 6 CG13097 FBtr0079697 8512172 8512592 GGAATT 6mer3-8 dme-miR-932-5p 2L - 8512245 8512286 3'utr CG13097 FlyBase G7103.1 GATTAGGCACGCGTGCAGCTTGCGGAATTTGACTATTCTTAG 11 8512266 0.93218008 5 10 50 0.941176471 1.204119983 0.294117647 0.363636364 0.588235294 11 1 0 16 2L:8512245-8512286 6 11 630 FBgn0032051 1042.693333 50.99 78.90333333 0.010549602 0.215728574 0.139411094 -13 3 -5 0.2 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2L 8525625 8525630 - 2L_8525625_8525630_- 0.963409345 0.950547719 0.956978532 0.009094525 lmgB FBtr0333420|FBtr0112744 8524997|8525551 8526861|8526861 2L - 8525604 8525647 3'utr lmgB FlyBase G9171.1 AAATCCACACGATCATATTTGACTGTTCTTTATTTCGTTATCAT 13 8525629 0.951911594 5 13 139 1 1.255272505 0.111111111 0.384615385 0.555555556 13 0 0 18 2L:8525604-8525647 6 lmgB FBtr0333420|FBtr0112744 8524997|8525551 8526861|8526861 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2L - 8525617 8525639 3'utr lmgB FlyBase G7107.1 ACGATCATATTTGACTGTTCTTT 9 8525628 0.73741131 3 8 86 0.916666667 0.740362689 0.583333333 0.222222222 0.416666667 9 0 1 11 2L:8525617-8525639 6 11 631 FBgn0085470 298.48 19.26 29.45666667 0.036853391 0.57113188 0.373429897 -1 -2 -1.5 0.2 dme-miR-263a-5p 6mer3-8 GTGCCA 2L 8537640 8537645 + 2L_8537640_8537645_+ 0.79584414 0.753100237 0.774472188 0.030224502 CG17834 FBtr0079689|FBtr0079688|FBtr0333418 8537596|8537596|8537596 8537932|8537932|8537932 2L + 8537619 8537662 3'utr CG17834 FlyBase G3213.1 CAATGGGTACTAGCAGTATTTGTGCCAAAGATTGAGGAACTCTC 12 8537639 0.689971482 4 12 77 1 1.146128036 0.5 0.083333333 0.214285714 12 0 0 14 2L:8537619-8537662 6 CG17834 FBtr0333418|FBtr0079688|FBtr0079689 8537596|8537596|8537596 8537932|8537932|8537932 GTGCCA 6mer3-8 dme-miR-263a-5p 2L + 8537620 8537661 3'utr CG17834 FlyBase G2538.1 AATGGGTACTAGCAGTATTTGTGCCAAAGATTGAGGAACTCT 7 8537639 0.98098198 3 7 51 1 1.146128036 0.5 0.428571429 0.714285714 7 0 0 14 2L:8537620-8537661 6 9.5 632 FBgn0028394 84 8.063333333 12.40666667 0.113095238 1.178172799 0.765717356 1 1 1 0.2 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 8537707 8537712 + 2L_8537707_8537712_+ 0.782657414 0.919747038 0.851202226 0.096936986 CG17834 FBtr0079689|FBtr0079688|FBtr0333418 8537596|8537596|8537596 8537932|8537932|8537932 2L + 8537691 8537743 3'utr CG17834 FlyBase G3214.1 GACCAATATCGCCAAAATGTGACTTAATATTATTAACTAATTAGCTGTAAGTG 12 8537708 0.907910897 5 12 97 1 1.146128036 0.214285714 0.166666667 0.285714286 12 0 0 14 2L:8537691-8537743 6 CG17834 FBtr0333418|FBtr0079688|FBtr0079689 8537596|8537596|8537596 8537932|8537932|8537932 ATGTGA 6mer3-8 dme-miR-1003-3p 2L + 8537695 8537728 3'utr CG17834 FlyBase G2539.1 AATATCGCCAAAATGTGACTTAATATTATTAACT 9 8537709 0.87117889 2 6 65 0.909090909 0.698970004 0.363636364 0.222222222 0.363636364 9 0 1 10 2L:8537695-8537728 6 8 633 FBgn0028394 84 8.063333333 12.40666667 0.095238095 0.992145515 0.644814616 -1 -2 -1.5 0.2 dme-miR-14-3p 6mer2-7 AGACTG 2L 8668152 8668157 + 2L_8668152_8668157_+ 0.999991372 0.99646067 0.998226021 0.002496582 Sema-1a FBtr0303878|FBtr0303879|FBtr0329931|FBtr0303877|FBtr0329932 8666210|8664168|8664168|8666210|8666034 8672041|8670014|8671917|8671917|8670014 2L + 8668134 8668174 3'utr Sema-1a FlyBase G3219.1 ACATAGGGTTTGTATTATAGACTGGACGAACGGAGGGCAGA 9 8668149 0.992450258 3 4 49 0.454545455 0.698970004 0.454545455 0.111111111 0.272727273 9 6 0 5 2L:8668134-8668174 6 Sema-1a FBtr0303877|FBtr0329931|FBtr0303879|FBtr0303878|FBtr0329932 8666210|8664168|8664168|8666210|8666034 8671917|8671917|8670014|8672041|8670014 AGACTG 6mer2-7 dme-miR-14-3p 2L + 8668138 8668162 3'utr Sema-1a FlyBase G2545.1 AGGGTTTGTATTATAGACTGGACGA 5 8668149 0.729059413 2 4 32 0.857142857 0.77815125 0 0.2 0.428571429 5 1 0 6 2L:8668138-8668162 6 5.5 634 FBgn0011259 295.3333333 4.256666667 6.55 0.018623025 1.292090838 0.839694656 3 3 3 0.2 dme-miR-12-5p 7mer-A1 ATACTCA 2L 8668261 8668267 + 2L_8668261_8668267_+ 0.820624445 0.821624175 0.82112431 0.000706965 Sema-1a FBtr0303878|FBtr0303879|FBtr0329931|FBtr0303877|FBtr0329932 8666210|8664168|8664168|8666210|8666034 8672041|8670014|8671917|8671917|8670014 2L + 8668202 8668285 3'utr Sema-1a FlyBase G3220.1 GGGGCATTGCTAATGTTGTTCTCATATTAAAGTATATTAGAAATAGGATAAGCTAATTGATACTCAATATTTTGTATGAGAAAC 22 8668259 0.990017337 5 21 208 0.96 1.380211242 0.12 0.090909091 0.2 22 1 0 24 2L:8668202-8668285 7 Sema-1a FBtr0303877|FBtr0329931|FBtr0303879|FBtr0303878|FBtr0329932 8666210|8664168|8664168|8666210|8666034 8671917|8671917|8670014|8672041|8670014 ATACTCA 7mer-A1 dme-miR-12-5p 2L + 8668202 8668282 3'utr Sema-1a FlyBase G2546.1 GGGGCATTGCTAATGTTGTTCTCATATTAAAGTATATTAGAAATAGGATAAGCTAATTGATACTCAATATTTTGTATGAGA 15 8668259 0.987158117 5 14 122 0.952380952 1.301029996 0.142857143 0.333333333 0.523809524 15 1 0 20 2L:8668202-8668282 7 16 635 FBgn0011259 295.3333333 4.256666667 6.55 0.054176072 3.75880971 2.442748092 2 2 2 0.2 dme-miR-307a-3p 6mer3-8 GGTTGT 2L 8685274 8685279 - 2L_8685274_8685279_- 0.999923593 0.999999162 0.999961377 5.35E-05 PrBP FBtr0079750 8684821 8685347 2L - 8685151 8685320 3'utr PrBP FlyBase G9186.1 TGATCGACCAGGTGTTCTCGCGTCCACCCACAAGTTTTTTTGGTTGTTCTTCAAGATGTTCTCTACAAAACATGCATACTTCGCTTTTGAGTACTTCAGCATTTCAATGCAATTGTTTGCGCGTTTATGAACTAGTTGTAGTCCAATGCATTTTAATCTAATCTAATTTT 52 8685263 0.977960038 23 51 475 0.983606557 1.77815125 0.262295082 0.173076923 0.295081967 52 1 0 60 2L:8685151-8685320 6 PrBP FBtr0079750 8684821 8685347 GGTTGT 6mer3-8 dme-miR-307a-3p 2L - 8685163 8685289 3'utr PrBP FlyBase G7120.1 AAGTTTTTTTGGTTGTTCTTCAAGATGTTCTCTACAAAACATGCATACTTCGCTTTTGAGTACTTCAGCATTTCAATGCAATTGTTTGCGCGTTTATGAACTAGTTGTAGTCCAATGCATTTTAATC 36 8685280 0.812420349 14 34 338 0.96 1.681241237 0.14 0.305555556 0.5 36 2 0 48 2L:8685163-8685289 6 17 636 FBgn0032059 209.34 22.80333333 34.73333333 0.081207605 0.745505043 0.489443378 -16 1 -7.5 0.2 dme-miR-276a-3p 6mer3-8 AGTTCC 2L 8710413 8710418 - 2L_8710413_8710418_- 0.997126663 0.99861898 0.997872821 0.001055215 raw FBtr0340231|FBtr0303868|FBtr0079746|FBtr0340232|FBtr0079745 8709878|8709878|8709878|8709878|8709878 8710434|8710434|8710434|8710434|8710434 2L - 8710398 8710458 stop_codon raw FlyBase G9211.1 TACAACAACCGCGACCGCTGCTAAATCGTACCTGTATTTAAGTTCCAGCACGTGACAATTT 70 8710423 0.985328005 10 65 537 0.933333333 1.84509804 0.293333333 0.057142857 0.12 70 5 0 70 2L:8710398-8710458 6 raw FBtr0340232|FBtr0079745|FBtr0303868|FBtr0079746|FBtr0340231 8709878|8709878|8709878|8709878|8709878 8710434|8710434|8710434|8710434|8710434 AGTTCC 6mer3-8 dme-miR-276a-3p 2L - 8710394 8710457 stop_codon raw FlyBase G7144.1 ACAACAACCGCGACCGCTGCTAAATCGTACCTGTATTTAAGTTCCAGCACGTGACAATTTAAGC 41 8710422 0.986824969 9 37 318 0.815384615 1.72427587 0.153846154 0.390243902 0.615384615 41 12 0 53 2L:8710394-8710457 6 8.5 637 FBgn0003209 722.0533333 20.74666667 31.84333333 0.011771984 0.40970437 0.266931854 5 4 4.5 0.2 dme-miR-14-3p 7mer-m8 AAGACTG 2L 876828 876834 + 2L_876828_876834_+ 0.671077071 0.671067667 0.671072369 6.65E-06 PNUTS FBtr0091489|FBtr0332000 876736|876736 877038|877038 2L + 876801 876854 3'utr PNUTS FlyBase G935.3 AGATTTCCGAAATCGAGTCCCCACATGAAGACTGTATCCAGGTTAGCCGCCGCA 328 876826 0.890271768 7 319 1537 0.9765625 2.096910013 0.111979167 0.131097561 0.2578125 328 7 2 375 2L:876801-876854 7 PNUTS FBtr0332000|FBtr0091489 876736|876736 877038|877038 AAGACTG 7mer-m8 dme-miR-14-3p 2L + 876736 876876 stop_codon PNUTS FlyBase G753.1 AGGACCTACCCGAATCTTCTGCGGAAGATTCAGCTGCATAGATCTCAGACGCGCAACGGAGGCCAAGATTTCCGAAATCGAGTCCCCACATGAAGACTGTATCCAGGTTAGCCGCCGCAAGTTAATCTAAGTGTATATATG 197 876826 0.960188933 16 181 895 0.932659933 1.965358514 0.131313131 0.355329949 0.572390572 197 18 2 277 2L:876736-876876 7 247.5 638 FBgn0053526 1548.73 47.96666667 73.53 0.159808359 5.159833218 3.365973072 2 2 2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 8829076 8829082 + 2L_8829076_8829082_+ 0.80088033 0.800814093 0.800847211 4.68E-05 SoxN FBtr0330210|FBtr0330210|FBtr0330210|FBtr0079733|FBtr0079733|FBtr0079733 8828778|8828778|8828778|8828211|8828211|8828211 8829670|8829670|8829670|8829670|8829670|8829670 2L + 8828888 8829143 3'utr SoxN FlyBase G3269.1 TCGAATTTCGAAGTGGCAGAGTAACACATGCGCATATAAATAAATGAGAATAGGATTAATGTTTAGTCATTTAAATGATGCATACGCACTGTTGTACCACAATAGTAAGATGACAACTCACTTGCATTCCATACCGTTCTGCTTCGATTTCCCTTGATTTCCCGCTTGTTGCATAGCTAAAACAATTGTGTGATACAAATAAACTGTTGCCAATTACGGGGACAACGGCAACAACAACAAATTCGTTTGGTTTAGC 161 8829074 0.974663391 25 153 954 0.954773869 1.579783597 0.070351759 0.180124224 0.336683417 161 5 4 190 2L:8828888-8829143 7 SoxN FBtr0330210|FBtr0330210|FBtr0330210|FBtr0079733|FBtr0079733|FBtr0079733 8828778|8828778|8828778|8828211|8828211|8828211 8829670|8829670|8829670|8829670|8829670|8829670 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 8829032 8829122 3'utr SoxN FlyBase G2583.3 CGATTTCCCTTGATTTCCCGCTTGTTGCATAGCTAAAACAATTGTGTGATACAAATAAACTGTTGCCAATTACGGGGACAACGGCAACAAC 68 8829074 0.969964895 8 64 382 0.969072165 1.973127854 0.020618557 0.323529412 0.525773196 68 3 0 94 2L:8829032-8829122 7 84.5 639 FBgn0029123 4.333333333 0.126666667 0.19 19.5 667.1052632 444.7368421 2 2 2 0.2 dme-miR-970-3p 7mer-m8 TCTTATG 2L 8829333 8829339 + 2L_8829333_8829339_+ 0.630393406 0.637568106 0.633980756 0.005073279 SoxN FBtr0330210|FBtr0079733 8828778|8828211 8829670|8829670 2L + 8829221 8829355 3'utr SoxN FlyBase G3271.1 GACGCGGAATCAAGCACAAGTTTAGTAGGAGTAAAGGCAGTTGTGGCGAGGCGATGAAAATATTTCAGAAAAGCAAAGAAAAATGTCAAAAAACATTCTATTTTATAAATTCTCTTATGCATTAAGTAATTATAA 42 8829335 0.990102542 11 40 382 0.943396226 1.698970004 0.245283019 0.238095238 0.396226415 42 3 0 50 2L:8829221-8829355 7 SoxN FBtr0330210|FBtr0079733 8828778|8828211 8829670|8829670 TCTTATG 7mer-m8 dme-miR-970-3p 2L + 8829315 8829349 3'utr SoxN FlyBase G2585.1 ATTCTATTTTATAAATTCTCTTATGCATTAAGTAA 24 8829335 0.757241616 3 24 249 1 1.544068044 0.314285714 0.333333333 0.542857143 24 0 0 35 2L:8829315-8829349 7 28 640 FBgn0029123 4.333333333 0.126666667 0.19 6.461538462 221.0526316 147.3684211 -2 -2 -2 0.2 dme-bantam-3p 6mer3-8 TGATCT 2L 8953627 8953632 - 2L_8953627_8953632_- 0.863397369 0.873150162 0.868273765 0.006896271 CG31886 FBtr0079787|FBtr0113029|FBtr0303885 8953479|8953479|8953479 8954021|8954021|8954021 2L - 8953513 8953806 3'utr CG31886 FlyBase G9261.1 GAATGTAGCCTAAGACGCAAGCATTTTTTGGTCTACAAATGAAAATGGGAAAATAGTAAGATAAAATATGTAAATTGTATATCGTGTACAAATAAATGTAGATACCAAGTAATTTTAAGATGAAATTGTAGTACTTATCAATTAATTCAATTATTCTCATTTTATAAACGACTTTGATCTTTTTGTTTACCTGAACACATTTTAAAGACAATTCTTATGTAGTCATTTGAAGAGGATTAGTTTTAATGCTTTTGTTGACTTTGTATAAGTGATTTGAATTTTAAGGAAATTTTC 969 8953624 0.831691 75 931 9074 0.963288109 1.905616011 0.106145251 0.226006192 0.401436552 969 32 14 1207 2L:8953513-8953806 6 CG31886 FBtr0303885|FBtr0113029|FBtr0079787 8953479|8953479|8953479 8954021|8954021|8954021 TGATCT 6mer3-8 dme-bantam-3p 2L - 8953513 8953805 3'utr CG31886 FlyBase G7179.1 AATGTAGCCTAAGACGCAAGCATTTTTTGGTCTACAAATGAAAATGGGAAAATAGTAAGATAAAATATGTAAATTGTATATCGTGTACAAATAAATGTAGATACCAAGTAATTTTAAGATGAAATTGTAGTACTTATCAATTAATTCAATTATTCTCATTTTATAAACGACTTTGATCTTTTTGTTTACCTGAACACATTTTAAAGACAATTCTTATGTAGTCATTTGAAGAGGATTAGTTTTAATGCTTTTGTTGACTTTGTATAAGTGATTTGAATTTTAAGGAAATTTTC 741 8953623 0.817424036 78 711 7034 0.960637301 1.96933118 0.11715089 0.326585695 0.532333646 741 32 10 1025 2L:8953513-8953805 6 526 641 FBgn0032079 1123.893333 53.47 82.11333333 0.468015945 9.837291939 6.405780628 -8 -9 -8.5 0.2 dme-miR-305-5p 7mer-A1 GTACAAA 2L 8970040 8970046 + 2L_8970040_8970046_+ 0.685963941 0.60739756 0.64668075 0.055554764 CG18088 FBtr0332187|FBtr0079759 8970025|8970025 8970627|8970259 2L + 8970028 8970072 3'utr CG18088 FlyBase G3294.1 TAAGTCTCTTATGTACAAAATAAAGTTTAAGTTTAGTTTAAAACT 48 8970038 0.679852743 7 43 378 0.893939394 1.16879202 0.045454545 0.3125 0.5 48 4 3 59 2L:8970028-8970072 7 CG18088 FBtr0079759|FBtr0332187 8970025|8970025 8970259|8970627 GTACAAA 7mer-A1 dme-miR-305-5p 2L + 8970029 8970060 3'utr CG18088 FlyBase G2604.1 AAGTCTCTTATGTACAAAATAAAGTTTAAGTT 14 8970037 0.657229584 3 12 100 0.857142857 0.77815125 0.19047619 0.428571429 0.619047619 14 1 2 18 2L:8970029-8970060 7 30.5 642 FBgn0032082 216 12.59666667 19.19 0.141203704 2.42127547 1.589369463 2 3 2.5 0.2 dme-miR-8-3p 6mer2-7 AGTATT 2L 8977904 8977909 - 2L_8977904_8977909_- 0.992926632 0.877874042 0.935400337 0.081354474 CG13101 FBtr0079784 8977832 8978041 2L - 8977855 8977924 3'utr CG13101 FlyBase G9274.1 AAATTCGTTCTGCGGAGTATTGTTGCTTAACGGCATTTGAAGGTAAAACCCGGTCTATGTCCTTCGGCGG 12 8977904 0.988786317 7 12 110 1 1.113943352 0.153846154 0.083333333 0.153846154 12 0 0 13 2L:8977855-8977924 6 CG13101 FBtr0079784 8977832 8978041 AGTATT 6mer2-7 dme-miR-8-3p 2L - 8977857 8977924 3'utr CG13101 FlyBase G7194.1 AAATTCGTTCTGCGGAGTATTGTTGCTTAACGGCATTTGAAGGTAAAACCCGGTCTATGTCCTTCGGC 9 8977903 0.987188654 7 9 79 1 1.176091259 0.066666667 0.333333333 0.6 9 0 0 15 2L:8977857-8977924 6 8 643 FBgn0032084 10 0.853333333 1.306666667 0.8 9.375 6.12244898 -5 -6 -5.5 0.2 dme-miR-932-5p 7mer-m8 GGAATTG 2L 8986006 8986012 - 2L_8986006_8986012_- 0.599326992 0.681750157 0.640538574 0.058282004 rost FBtr0079782|FBtr0331454|FBtr0331453 8985934|8985934|8985934 8986340|8986340|8986340 2L - 8985971 8986023 3'utr rost FlyBase G9283.1 AAAAGAATAATGGAATTGTATTAAAATATATCACGAATATCAAAAGTGGAAAG 11 8986013 0.985048824 3 10 80 0.916666667 1.041392685 0.166666667 0.090909091 0.166666667 11 1 0 11 2L:8985971-8986023 7 rost FBtr0079782|FBtr0331454|FBtr0331453 8985934|8985934|8985934 8986340|8986340|8986340 GGAATTG 7mer-m8 dme-miR-932-5p 2L - 8985978 8986023 3'utr rost FlyBase G7201.1 AAAAGAATAATGGAATTGTATTAAAATATATCACGAATATCAAAAG 11 8986013 0.984349602 3 9 69 0.875 1.146128036 0.0625 0.272727273 0.5 11 2 0 14 2L:8985978-8986023 7 9 644 FBgn0011705 1154.336667 95.13666667 145.5366667 0.007796686 0.09460075 0.061840086 1 1 1 0.2 dme-miR-79-3p 7mer-A1 AGCTTTA 2L 9163658 9163664 + 2L_9163658_9163664_+ 0.430709702 0.438557709 0.434633706 0.005549374 CG32982 FBtr0110960|FBtr0301039|FBtr0330218|FBtr0079771|FBtr0303888|FBtr0301040|FBtr0330219 9163162|9163162|9163463|9163448|9163448|9163162|9163448 9163721|9163721|9163721|9163716|9163721|9163721|9163721 2L + 9163627 9163663 3'utr CG32982 FlyBase G3309.1 TAGTACTCGTAGTGTGTGTGCTCCAATGTCCAGCTTT 14 9163645 0.690710413 5 13 99 0.933333333 0.84509804 0.066666667 0.071428571 0.133333333 14 0 1 14 2L:9163627-9163663 6 CG32982 FBtr0079771|FBtr0330218|FBtr0301039|FBtr0110960|FBtr0330219|FBtr0301040|FBtr0303888 9163448|9163463|9163162|9163162|9163448|9163162|9163448 9163716|9163721|9163721|9163721|9163721|9163721|9163721 AGCTTTA 7mer-A1 dme-miR-79-3p 2L + 9163617 9163679 3'utr CG32982 FlyBase G2609.1 AACTATGTAGTAGTACTCGTAGTGTGTGTGCTCCAATGTCCAGCTTTATGTAAATGTTTAAAT 13 9163644 0.977906816 6 12 115 0.947368421 1.255272505 0.052631579 0.384615385 0.578947368 13 1 0 18 2L:9163617-9163679 7 6.5 645 FBgn0052982 930.23 36.84 56.35333333 0.006987519 0.176438654 0.115343665 13 14 13.5 0.2 dme-miR-31a-5p 6mer3-8 TCTTGC 2L 9245858 9245863 + 2L_9245858_9245863_+ 0.83937157 0.844378161 0.841874866 0.003540201 tai FBtr0333405|FBtr0303872|FBtr0303871|FBtr0303873|FBtr0304974|FBtr0303870 9245807|9245807|9245807|9245807|9245807|9245807 9247186|9247186|9247186|9250211|9250211|9247186 2L + 9245819 9245897 3'utr tai FlyBase G3332.1 CCTAGTTCAGAACCAAGGATCACGTACAACCAAAACTTCTCTTGCGCACGCATTTATGGCTCTAGATACGAAAAACAAT 26 9245874 0.975721882 12 25 157 0.96969697 1.204119983 0.060606061 0.115384615 0.303030303 26 0 1 32 2L:9245819-9245897 6 tai FBtr0304974|FBtr0303870|FBtr0303871|FBtr0303873|FBtr0333405|FBtr0303872 9245807|9245807|9245807|9245807|9245807|9245807 9250211|9247186|9247186|9250211|9247186|9247186 TCTTGC 6mer3-8 dme-miR-31a-5p 2L + 9245832 9245885 3'utr tai FlyBase G2628.1 CAAGGATCACGTACAACCAAAACTTCTCTTGCGCACGCATTTATGGCTCTAGAT 12 9245860 0.970394221 6 12 70 1 1.255272505 0.222222222 0.333333333 0.555555556 12 0 0 18 2L:9245832-9245885 6 14.5 646 FBgn0041092 2562.806667 37.60666667 57.55666667 0.005657859 0.385569934 0.251925639 -16 -2 -9 0.2 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 9246846 9246851 + 2L_9246846_9246851_+ 0.990588784 0.997120147 0.993854466 0.004618327 tai FBtr0333405|FBtr0303872|FBtr0303871|FBtr0303873|FBtr0304974|FBtr0303870 9245807|9245807|9245807|9245807|9245807|9245807 9247186|9247186|9247186|9250211|9250211|9247186 2L + 9246808 9246874 3'utr tai FlyBase G3340.1 AAGCAAAGCGCGCAAAGCAAAGTTGGCGTTGCAATTTCATGTGAAGGCTATTTTACAGGTTTTGTTT 94 9246849 0.988618154 11 92 856 0.974358974 1.579783597 0.051282051 0.180851064 0.341880342 94 1 2 114 2L:9246808-9246874 6 tai FBtr0304974|FBtr0303870|FBtr0303871|FBtr0303873|FBtr0333405|FBtr0303872 9245807|9245807|9245807|9245807|9245807|9245807 9250211|9247186|9247186|9250211|9247186|9247186 ATGTGA 6mer3-8 dme-miR-1003-3p 2L + 9246822 9246871 3'utr tai FlyBase G2635.1 AAGCAAAGTTGGCGTTGCAATTTCATGTGAAGGCTATTTTACAGGTTTTG 47 9246849 0.843664743 7 47 435 1 1.832508913 0.073529412 0.340425532 0.544117647 47 0 0 68 2L:9246822-9246871 6 68 647 FBgn0041092 2562.806667 37.60666667 57.55666667 0.02653341 1.808190037 1.181444374 -3 -3 -3 0.2 dme-bantam-3p 6mer3-8 TGATCT 2L 9331906 9331911 + 2L_9331906_9331911_+ 0.817697459 0.764611769 0.791154614 0.037537258 Cks30A FBtr0079799 9331350 9331981 2L + 9331816 9331928 3'utr Cks30A FlyBase G3348.1 ATTTTATCATACTTTATGTTGCCATTTCGAAACGGAAGCGAAAAGAAGAATTTTGCTCACTTCTTTTAAGCTTAAATGAAATCTGATTTGTGATCTTGAAATTTTTAATCAAT 198 9331902 0.89813824 16 190 1752 0.965779468 1.705863712 0.326996198 0.247474747 0.433460076 198 5 4 254 2L:9331816-9331928 6 Cks30A FBtr0079799 9331350 9331981 TGATCT 6mer3-8 dme-bantam-3p 2L + 9331880 9331925 3'utr Cks30A FlyBase G2643.1 TTTAAGCTTAAATGAAATCTGATTTGTGATCTTGAAATTTTTAATC 140 9331902 0.68933827 7 135 1233 0.961722488 2.303196057 0.320574163 0.35 0.564593301 140 8 0 201 2L:9331880-9331925 6 160 648 FBgn0010314 382.0366667 41.23 63.10666667 0.418807968 3.880669415 2.535389816 4 4 4 0.2 dme-miR-8-3p 7mer-A1 AGTATTA 2L 9435242 9435248 + 2L_9435242_9435248_+ 0.821307827 0.822756149 0.822031988 0.001024103 scat FBtr0079809 9434914 9435341 2L + 9435200 9435266 3'utr scat FlyBase G3372.1 TGCGTACAAATCAATGGCGGTAAACGATTCCCTTGTTCCTTTAGTATTATTATCGTTAGCTGGATTT 46 9435240 0.92517206 10 46 453 1 1.73239376 0.314814815 0.173913043 0.296296296 46 0 0 54 2L:9435200-9435266 7 scat FBtr0079809 9434914 9435341 AGTATTA 7mer-A1 dme-miR-8-3p 2L + 9435183 9435261 3'utr scat FlyBase G2670.1 TAATCAACAAATTTCAATGCGTACAAATCAATGGCGGTAAACGATTCCCTTGTTCCTTTAGTATTATTATCGTTAGCTG 27 9435240 0.989730428 8 26 253 1 1.653212514 0.244444444 0.555555556 0.733333333 27 0 0 45 2L:9435183-9435261 7 30 649 FBgn0011232 207.99 7.106666667 10.93333333 0.144237704 4.221388368 2.743902439 2 2 2 0.2 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 2L 9492052 9492057 - 2L_9492052_9492057_- 0.87078657 0.977697816 0.924242193 0.075597635 Gdi FBtr0306169|FBtr0345433|FBtr0079862 9491174|9491174|9491934 9492083|9492083|9492083 2L - 9491957 9492073 3'utr Gdi FlyBase G9313.1 AGGCCTCATCTGGTTATGGTGCATTTGGACAGCTCAACATCAGCCACAAACATCGTAGATCGTCTCAGCGTCGTGGCCAAACCTTAAAAAAAAAAATACCCAAGATAAGAAAACCCA 48 9492049 0.98541852 13 48 228 1 1.72427587 0.113207547 0.104166667 0.188679245 48 0 0 53 2L:9491957-9492073 6 Gdi FBtr0345433|FBtr0079862|FBtr0306169 9491174|9491934|9491174 9492083|9492083|9492083 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 2L - 9492036 9492096 stop_codon Gdi FlyBase G7224.1 CGAGGAGCAGTAAACGGGAATGAAGGCCTCATCTGGTTATGGTGCATTTGGACAGCTCAAC 9 9492054 0.974722863 5 8 51 1 1.204119983 0.3125 0.555555556 0.75 9 0 0 16 2L:9492036-9492096 6 17.5 650 FBgn0004868 1474.943333 78.36666667 119.7266667 0.011864863 0.22330923 0.146166268 -8 -3 -5.5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 2L 9519762 9519768 + 2L_9519762_9519768_+ 0.821579366 0.821712674 0.82164602 9.43E-05 CG33298 FBtr0089854|FBtr0301065|FBtr0301064 9519753|9519753|9519753 9520696|9520696|9520696 2L + 9519743 9519815 stop_codon CG33298 FlyBase G3404.1 ATCAGATTATAACAACGATTACCTGATTAAGCGCCAAAATGCAATTCTTCGGCTATCTCAGCGGCAACTAAAA 59 9519769 0.653021631 10 56 306 0.957746479 1.531478917 0.112676056 0.152542373 0.295774648 59 2 1 68 2L:9519743-9519815 7 CG33298 FBtr0301064|FBtr0301065|FBtr0089854 9519753|9519753|9519753 9520696|9520696|9520696 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2L + 9519726 9519808 stop_codon CG33298 FlyBase G2690.1 CGATTATGGGTCTAAGAATCAGATTATAACAACGATTACCTGATTAAGCGCCAAAATGCAATTCTTCGGCTATCTCAGCGGCA 35 9519769 0.967301194 6 32 174 0.903846154 1.672097858 0.134615385 0.4 0.596153846 35 5 0 47 2L:9519726-9519808 7 39.5 651 FBgn0032120 1173.196667 22.66 34.66333333 0.033668694 1.743159753 1.139532647 -7 -7 -7 0.2 dme-miR-184-5p 6mer3-8 TGATAA 2L 9519895 9519900 + 2L_9519895_9519900_+ 0.987031279 0.932136789 0.959584034 0.038816273 CG33298 FBtr0089854|FBtr0301065|FBtr0089853|FBtr0301064 9519753|9519753|9519767|9519753 9520696|9520696|9520696|9520696 2L + 9519829 9519904 3'utr CG33298 FlyBase G3405.1 TAGCAACCCCCAAAACTTGTACACATGTGCTTTCGCTCTTAATATGTGGCCTTCGACACCGATTATTGATAATATT 20 9519891 0.983592534 8 19 151 1 1.431363764 0.111111111 0.25 0.444444444 20 0 0 27 2L:9519829-9519904 6 CG33298 FBtr0301064|FBtr0089853|FBtr0301065|FBtr0089854 9519753|9519767|9519753|9519753 9520696|9520696|9520696|9520696 TGATAA 6mer3-8 dme-miR-184-5p 2L + 9519842 9519903 3'utr CG33298 FlyBase G2691.1 AACTTGTACACATGTGCTTTCGCTCTTAATATGTGGCCTTCGACACCGATTATTGATAATAT 23 9519881 0.72833523 12 23 169 1 1.568201724 0 0.434782609 0.648648649 23 0 0 37 2L:9519842-9519903 6 8 652 FBgn0032120 1173.196667 22.66 34.66333333 0.006818976 0.353045013 0.230791422 4 14 9 0.2 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 9520288 9520294 + 2L_9520288_9520294_+ 0.697313745 0.682627755 0.68997075 0.010384499 CG33298 FBtr0089854|FBtr0301065|FBtr0089853|FBtr0301064 9519753|9519753|9519767|9519753 9520696|9520696|9520696|9520696 2L + 9520103 9520333 3'utr CG33298 FlyBase G3407.2 ACTAGGGAGCCAGAAGTGCTCGAGAATTGAACCCAACCTAACCGACTATTGTTAAATAGAAGCGAAAATGCAATGCTTATTTATGTGTACGATTATTTAAACTAGCGACTAATAGATGTATCACCCTAACAGAAATACTTGACAATTCAAACACAACAGAACTCCATTGCGAGTTCGATGATAAGGCTGTGATTCTACACTCATGAAGGATATACCTAAGCATATGATATA 667 9520284 0.872483124 32 627 5108 0.941634241 2.161966616 0.029831388 0.142428786 0.258106355 667 41 4 726 2L:9520103-9520333 7 CG33298 FBtr0301064|FBtr0089853|FBtr0301065|FBtr0089854 9519753|9519767|9519753|9519753 9520696|9520696|9520696|9520696 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L + 9520200 9520334 3'utr CG33298 FlyBase G2694.1 TAAACTAGCGACTAATAGATGTATCACCCTAACAGAAATACTTGACAATTCAAACACAACAGAACTCCATTGCGAGTTCGATGATAAGGCTGTGATTCTACACTCATGAAGGATATACCTAAGCATATGATATAT 441 9520283 0.813376428 19 414 3437 0.939882698 2.329736775 0.021994135 0.392290249 0.607038123 441 39 2 641 2L:9520200-9520334 7 510.5 653 FBgn0032120 1173.196667 22.66 34.66333333 0.435135911 22.52868491 14.72737763 4 5 4.5 0.2 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 9539238 9539244 + 2L_9539238_9539244_+ 0.796595033 0.797212726 0.796903879 0.00043678 Oatp30B FBtr0079825|FBtr0079826|FBtr0079828|FBtr0079827 9538653|9538653|9538653|9538653 9540060|9540060|9540060|9540045 2L + 9539212 9539257 3'utr Oatp30B FlyBase G3412.1 ATTTAACCATTGTCAATGGAAATTGTGCTGTGAAACAATTTGTGAG 201 9539235 0.727564593 5 195 1097 0.977011494 1.62838893 0.011494253 0.23880597 0.413793103 201 1 5 255 2L:9539212-9539257 7 Oatp30B FBtr0079827|FBtr0079828|FBtr0079826|FBtr0079825 9538653|9538653|9538653|9538653 9540045|9540060|9540060|9540060 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L + 9539213 9539260 3'utr Oatp30B FlyBase G2697.1 TTTAACCATTGTCAATGGAAATTGTGCTGTGAAACAATTTGTGAGTAT 155 9539235 0.719439841 5 154 833 0.995594714 2.354108439 0 0.35483871 0.559471366 155 1 0 226 2L:9539213-9539260 7 177.5 654 FBgn0032123 86 1.96 2.986666667 2.063953488 90.56122449 59.43080357 3 3 3 0.2 dme-miR-305-5p 7mer-A1 GTACAAA 2L 9573472 9573478 + 2L_9573472_9573478_+ 0.782334437 0.782725195 0.782529816 0.000276337 CG3838 FBtr0079835|FBtr0079834 9572964|9572964 9573572|9573572 2L + 9573414 9573485 3'utr CG3838 FlyBase G3419.1 TGTTAGTTTAAGGACACTGTATATACGCTGCTATTGAAACCTAAACTATAGAATCTGTGTACAAATGAATTT 21 9573447 0.976981402 6 20 138 0.962962963 1.414973348 0 0.238095238 0.407407407 21 1 0 26 2L:9573414-9573485 7 CG3838 FBtr0079835|FBtr0079834 9572964|9572964 9573572|9573572 GTACAAA 7mer-A1 dme-miR-305-5p 2L + 9573424 9573484 3'utr CG3838 FlyBase G2703.1 AGGACACTGTATATACGCTGCTATTGAAACCTAAACTATAGAATCTGTGTACAAATGAATT 10 9573468 0.981415008 7 9 59 0.875 0.669006781 0.0625 0.3 0.5625 10 0 2 14 2L:9573424-9573484 7 7 655 FBgn0032130 513.3333333 25.81 39.59333333 0.013636364 0.271212708 0.176797441 25 4 14.5 0.2 dme-miR-1008-3p 6mer2-7 GCTGTG 2L 9573534 9573539 + 2L_9573534_9573539_+ 0.999999521 0.999999377 0.999999449 7.07E-08 CG3838 FBtr0079835|FBtr0079834 9572964|9572964 9573572|9573572 2L + 9573509 9573552 3'utr CG3838 FlyBase G3420.1 TAAAGAGATAGATCGATATCAAACTGCTGTGTGTAATAATAAAC 17 9573540 0.967257934 5 16 120 0.954545455 1.322219295 0.045454545 0.235294118 0.409090909 17 1 0 21 2L:9573509-9573552 6 CG3838 FBtr0079835|FBtr0079834 9572964|9572964 9573572|9573572 GCTGTG 6mer2-7 dme-miR-1008-3p 2L + 9573517 9573553 3'utr CG3838 FlyBase G2704.1 TAGATCGATATCAAACTGCTGTGTGTAATAATAAACA 8 9573540 0.672032578 3 7 58 0.9 0.954242509 0 0.25 0.4 8 1 0 9 2L:9573517-9573553 6 12.5 656 FBgn0032130 513.3333333 25.81 39.59333333 0.024350649 0.484308408 0.315709715 -6 -6 -6 0.2 dme-miR-184-3p 6mer2-7 CCGTCC 2L 9615705 9615710 + 2L_9615705_9615710_+ 0.994982683 0.997504612 0.996243647 0.001783253 Trx-2 FBtr0079839|FBtr0079840 9615680|9615680 9616404|9616047 2L + 9615577 9615781 stop_codon Trx-2 FlyBase G3425.1 TCCAGCATGCCCACCTTCGTGTTCCTCAAGAACGGCGTCAAGGTCGAAGAGTTCGCCGGAGCCAACGCCAAGCGTCTGGAGGATGTCATCAAGGCCAATATCTAAGTGGGCAGCGCATAGACGTCTGGCCGTCCCCCTGATCCACCTATGAGTTTTCTTCATAACATTTAGTTAATTAATTAATTCCATAAGTGCAGGGTTTTGC 90 9615702 0.980793021 26 83 594 0.923076923 1.380211242 0.230769231 0.155555556 0.269230769 90 5 3 96 2L:9615577-9615781 6 Trx-2 FBtr0079840|FBtr0079839 9615680|9615680 9616047|9616404 CCGTCC 6mer2-7 dme-miR-184-3p 2L + 9615616 9615741 stop_codon Trx-2 FlyBase G2707.1 AAGGTCGAAGAGTTCGCCGGAGCCAACGCCAAGCGTCTGGAGGATGTCATCAAGGCCAATATCTAAGTGGGCAGCGCATAGACGTCTGGCCGTCCCCCTGATCCACCTATGAGTTTTCTTCATAAC 47 9615702 0.885607615 16 42 263 0.944444444 1.531478917 0.166666667 0.361702128 0.583333333 47 3 1 68 2L:9615616-9615741 6 32 657 FBgn0040070 814.6666667 126.4433333 193.1533333 0.039279869 0.253077795 0.165671487 3 3 3 0.2 dme-miR-1002-5p 6mer3-8 CTACTT 2L 9682843 9682848 - 2L_9682843_9682848_- 0.587866169 0.720245428 0.654055798 0.09360623 Pka-C1 FBtr0079851|FBtr0079852 9682313|9682313 9696504|9696504 2L - 9682827 9682871 3'utr Pka-C1 FlyBase G9342.1 GATACATTATGCACTAATTTGTACTACTTTTATCGTCTATCTATT 16 9682852 0.80132787 2 16 205 1 1.230448921 0.117647059 0.0625 0.117647059 16 0 0 17 2L:9682827-9682871 6 Pka-C1 FBtr0079852|FBtr0079851 9682313|9682313 9696504|9696504 CTACTT 6mer3-8 dme-miR-1002-5p 2L - 9682831 9682864 3'utr Pka-C1 FlyBase G7262.1 TATGCACTAATTTGTACTACTTTTATCGTCTATC 13 9682852 0.693629994 2 12 137 0.894736842 1.230448921 0 0.461538462 0.631578947 13 2 0 17 2L:9682831-9682864 6 14.5 658 FBgn0000273 1905.386667 46.66 72.09 0.007610004 0.31075868 0.201137467 4 4 4 0.2 dme-miR-79-3p 7mer-A1 AGCTTTA 2L 9682919 9682925 - 2L_9682919_9682925_- 0.385177165 0.389203466 0.387190316 0.002847024 Pka-C1 FBtr0079851|FBtr0079852 9682313|9682313 9696504|9696504 2L - 9682875 9682947 3'utr Pka-C1 FlyBase G9343.1 AATATCTGAGGAGCCCAACCTGAGCTTTACTATCTGACTAACGATTTGAATGCATGCTTTACGTTATTGTATT 61 9682927 0.983869295 6 60 378 0.985074627 1.819543936 0.23880597 0.049180328 0.134328358 61 1 0 66 2L:9682875-9682947 7 Pka-C1 FBtr0079852|FBtr0079851 9682313|9682313 9696504|9696504 AGCTTTA 7mer-A1 dme-miR-79-3p 2L - 9682883 9682946 3'utr Pka-C1 FlyBase G7263.1 ATATCTGAGGAGCCCAACCTGAGCTTTACTATCTGACTAACGATTTGAATGCATGCTTTACGTT 43 9682927 0.98910942 3 43 283 1 1.755874856 0.315789474 0.302325581 0.473684211 43 0 0 57 2L:9682883-9682946 7 49.5 659 FBgn0000273 1905.386667 46.66 72.09 0.025978979 1.060865838 0.686641698 2 2 2 0.2 dme-miR-283-5p 7mer-m1 GATATTT 2L 9684995 9685001 - 2L_9684995_9685001_- 0.752049967 0.699335673 0.72569282 0.037274639 Pka-C1 FBtr0079851|FBtr0335495|FBtr0079852 9682313|9683360|9682313 9696504|9696504|9696504 2L - 9684964 9685020 3'utr Pka-C1 FlyBase G9351.1 ATTTAACCACGAGACTACAGATATTTAGTTGTAAACGTAGCTTAGTCTTAACTAAAG 9 9684993 0.863093103 6 8 73 0.9 0.954242509 0 0.111111111 0.2 9 1 0 9 2L:9684964-9685020 7 Pka-C1 FBtr0335495|FBtr0079852|FBtr0079851 9683360|9682313|9682313 9696504|9696504|9696504 GATATTT 7mer-m1 dme-miR-283-5p 2L - 9684964 9685018 3'utr Pka-C1 FlyBase G7267.1 TTAACCACGAGACTACAGATATTTAGTTGTAAACGTAGCTTAGTCTTAACTAAAG 6 9684996 0.982125427 4 6 50 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 2L:9684964-9685018 7 7 660 FBgn0000273 1905.386667 46.66 72.09 0.003673795 0.150021432 0.097100846 -8 -5 -6.5 0.2 dme-miR-277-3p 6mer2-7 GCATTT 2L 9708303 9708308 + 2L_9708303_9708308_+ 0.983394289 0.765460379 0.874427334 0.154102539 pelo FBtr0079847 9708268 9708883 2L + 9708265 9708345 stop_codon pelo FlyBase G3490.1 ACTAGGATCATAAATAGGAATAGCTTCATGGAATCTTGGCATTTGATAACGGAAAATTTTGACTTAGGAACTTAACTAGCG 40 9708293 0.974859371 8 39 281 0.980392157 1.397940009 0.215686275 0.225 0.392156863 40 0 1 50 2L:9708265-9708345 6 pelo FBtr0079847 9708268 9708883 GCATTT 6mer2-7 dme-miR-277-3p 2L + 9708254 9708346 stop_codon pelo FlyBase G2746.1 TAGCGATAGCGACTAGGATCATAAATAGGAATAGCTTCATGGAATCTTGGCATTTGATAACGGAAAATTTTGACTTAGGAACTTAACTAGCGA 27 9708323 0.98099544 8 24 170 0.923076923 1.255272505 0.025641026 0.296296296 0.512820513 27 2 1 36 2L:9708254-9708346 6 21 661 FBgn0011207 455.0266667 27.06 41.48666667 0.046151141 0.776053215 0.506186727 10 -20 -5 0.2 dme-miR-305-5p 6mer2-7 GTACAA 2L 9762211 9762216 + 2L_9762211_9762216_+ 0.928957215 0.60595437 0.767455792 0.22839747 zf30C FBtr0079865 9762140 9762375 2L + 9762187 9762223 3'utr zf30C FlyBase G3517.1 TTGTAAACGGATGCGTATTCTACTGTACAACAAATGG 10 9762209 0.740033823 4 10 68 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 2L:9762187-9762223 6 zf30C FBtr0079865 9762140 9762375 GTACAA 6mer2-7 dme-miR-305-5p 2L + 9762185 9762226 3'utr zf30C FlyBase G2769.1 TTTTGTAAACGGATGCGTATTCTACTGTACAACAAATGGGAT 6 9762210 0.989693604 2 5 54 0.9 0.954242509 0.3 0.333333333 0.6 6 1 0 9 2L:9762185-9762226 6 7.5 662 FBgn0022720 989.03 40.54 62.34666667 0.007583188 0.185002467 0.120295124 2 1 1.5 0.2 dme-miR-968-5p 7mer-A1 CTACTTA 2L 9762246 9762252 + 2L_9762246_9762252_+ 0.633480367 0.651498895 0.642489631 0.012741004 zf30C FBtr0079865 9762140 9762375 2L + 9762236 9762274 3'utr zf30C FlyBase G3518.1 ATAATAATATCTACTTAATGACTGGATTAATTAAATAAC 11 9762252 0.632889169 6 10 86 0.933333333 0.84509804 0.066666667 0.272727273 0.466666667 11 0 1 14 2L:9762236-9762274 7 zf30C FBtr0079865 9762140 9762375 CTACTTA 7mer-A1 dme-miR-968-5p 2L + 9762236 9762273 3'utr zf30C FlyBase G2770.1 ATAATAATATCTACTTAATGACTGGATTAATTAAATAA 10 9762250 0.728046111 8 10 76 1 1.255272505 0 0.6 0.777777778 10 0 0 18 2L:9762236-9762273 7 10 663 FBgn0022720 989.03 40.54 62.34666667 0.010110917 0.246669956 0.160393499 -6 -4 -5 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC 2L 9935126 9935132 - 2L_9935126_9935132_- 0.602550806 0.65724384 0.629897323 0.038673791 CG31712 FBtr0079896|FBtr0331636 9934765|9934765 9935255|9937003 2L - 9935089 9935143 3'utr CG31712 FlyBase G9443.1 ATTGTTGTAATTGTGTTCTATATTATTTTTATTATTTTAAGGACGAGCTGTGGTG 13 9935133 0.992917741 3 13 159 1 1.176091259 0.333333333 0.153846154 0.266666667 13 0 0 15 2L:9935089-9935143 7 CG31712 FBtr0331636|FBtr0079896 9934765|9934765 9937003|9935255 TGTGTTC 7mer-m8 dme-miR-317-3p 2L - 9935107 9935147 3'utr CG31712 FlyBase G7341.1 TTTCATTGTTGTAATTGTGTTCTATATTATTTTTATTATTT 14 9935133 0.771693206 3 12 182 0.888888889 1.380211242 0.481481481 0.428571429 0.703703704 14 3 0 24 2L:9935107-9935147 7 12.5 664 FBgn0051712 467.1633333 25.39666667 38.91333333 0.026757237 0.492190576 0.321226658 1 1 1 0.2 dme-miR-1006-3p 6mer2-7 GAATTT 2L 9960548 9960553 - 2L_9960548_9960553_- 0.998782343 0.983574516 0.991178429 0.010753539 CG5850 FBtr0309209|FBtr0309210|FBtr0309211|FBtr0329986|FBtr0079890|FBtr0303901 9959246|9960448|9960448|9960448|9960448|9960448 9961354|9961354|9961354|9961003|9961354|9961354 2L - 9960458 9960620 3'utr CG5850 FlyBase G9459.1 ATGTAGGTCTCCAACTTTTTGTGTGGCGAAGTAGTTAATTAAAAAAAAACATGCCTGAACCGATTGTGAATTTTGTGACTGCCGCCGGTCAGAAAAGGGCGTGACTTGTATTTAAATAGAAATTCTTATTGTAAAACTAATATACACATCAATAATATAATAT 107 9960556 0.983290046 19 102 789 0.955555556 1.809559715 0.162962963 0.224299065 0.385185185 107 5 1 129 2L:9960458-9960620 6 CG5850 FBtr0079890|FBtr0303901|FBtr0309211|FBtr0329986|FBtr0309209|FBtr0309210 9960448|9960448|9960448|9960448|9959246|9960448 9961354|9961354|9961354|9961003|9961354|9961354 GAATTT 6mer2-7 dme-miR-1006-3p 2L - 9960460 9960579 3'utr CG5850 FlyBase G7350.1 AAAAAAAACATGCCTGAACCGATTGTGAATTTTGTGACTGCCGCCGGTCAGAAAAGGGCGTGACTTGTATTTAAATAGAAATTCTTATTGTAAAACTAATATACACATCAATAATATAAT 87 9960549 0.983647737 15 84 639 0.965517241 2.049218023 0.181034483 0.287356322 0.465517241 87 4 0 112 2L:9960460-9960579 6 80.5 665 FBgn0032172 968.71 41.72666667 64.24 0.083100205 1.92922192 1.253113325 3 -4 -0.5 0.2 dme-miR-33-5p 7mer-A1 AATGCAA 2L 9964511 9964517 - 2L_9964511_9964517_- 0.736443818 0.763986196 0.750215007 0.019475418 Dref FBtr0310483|FBtr0079889 9964278|9964145 9964544|9964544 2L - 9964498 9964557 stop_codon Dref FlyBase G9473.2 TCACAACAATTAGTCTGCACTGGCGACTACTGTTTCTTATAATGCAAATACTTTTTAATT 29 9964519 0.792664869 9 25 265 0.894736842 1.531478917 0.157894737 0.206896552 0.394736842 29 4 0 34 2L:9964498-9964557 7 Dref FBtr0310483|FBtr0079889 9964278|9964145 9964544|9964544 AATGCAA 7mer-A1 dme-miR-33-5p 2L - 9964442 9964546 stop_codon Dref FlyBase G7361.1 AGTCTGCACTGGCGACTACTGTTTCTTATAATGCAAATACTTTTTAATTACTTTTAACGTAATCCGATCTTGTGTATATGAAAATGACTACCAGGGGCGAGGCAA 17 9964518 0.991908626 11 14 142 0.793103448 1.361727836 0.24137931 0.529411765 0.724137931 17 6 0 23 2L:9964442-9964546 7 14.5 666 FBgn0015664 973.63 41.70666667 63.79666667 0.014892721 0.34766624 0.227284602 2 1 1.5 0.2 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 9994974 9994981 + 2L_9994974_9994981_+ 0.6250845 0.624268418 0.624676459 0.00057707 bib FBtr0329984|FBtr0079929 9994780|9994657 9995538|9995538 2L + 9994964 9994991 3'utr bib FlyBase G3617.1 AAAGATCATGTACGCTTAAGGAACTAAT 12 9994973 0.71476225 3 11 55 0.9375 1.176091259 0.125 0.333333333 0.5 12 1 0 15 2L:9994964-9994991 8 bib FBtr0329984|FBtr0079929 9994780|9994657 9995538|9995538 TACGCTTA 8mer-A1 dme-miR-965-3p 2L + 9994959 9994990 3'utr bib FlyBase G2856.1 CTAGCAAAGATCATGTACGCTTAAGGAACTAA 8 9994972 0.793843936 3 7 37 0.818181818 0.954242509 0.363636364 0.375 0.545454545 8 2 0 9 2L:9994959-9994990 8 10 667 FBgn0000180 1.333333333 0.05 0.08 7.5 200 125 1 2 1.5 0.2 dme-miR-14-3p 7mer-A1 AGACTGA 2L 9995043 9995049 + 2L_9995043_9995049_+ 0.819170918 0.817691834 0.818431376 0.001045882 bib FBtr0329984|FBtr0079929 9994780|9994657 9995538|9995538 2L + 9995002 9995066 3'utr bib FlyBase G3618.1 ATTCACCGAAGGCTAGACTAAACGAGTGATCTAGATGATCTAGACTGAAAGACAGGTGCATTTAA 15 9995040 0.952063857 5 15 65 1 1.278753601 0.157894737 0.266666667 0.421052632 15 0 0 19 2L:9995002-9995066 7 bib FBtr0329984|FBtr0079929 9994780|9994657 9995538|9995538 AGACTGA 7mer-A1 dme-miR-14-3p 2L + 9995001 9995065 3'utr bib FlyBase G2857.1 CATTCACCGAAGGCTAGACTAAACGAGTGATCTAGATGATCTAGACTGAAAGACAGGTGCATTTA 21 9995041 0.953744492 8 19 86 0.966666667 1.161368002 0.1 0.333333333 0.533333333 21 0 1 29 2L:9995001-9995065 7 15.5 668 FBgn0000180 1.333333333 0.05 0.08 11.625 310 193.75 3 2 2.5 0.2 dme-miR-14-3p 7mer-A1 AGACTGA 2L 9995216 9995222 + 2L_9995216_9995222_+ 0.822624786 0.820264354 0.82144457 0.001669055 bib FBtr0329984|FBtr0079929 9994780|9994657 9995538|9995538 2L + 9995193 9995242 3'utr bib FlyBase G3619.1 ATGTTTCTTGTAAATGCAAAACTAGACTGAACTTACCTAAAGCATTTTGT 18 9995215 0.916712645 6 17 102 0.95 0.977723605 0.15 0.111111111 0.2 18 0 1 19 2L:9995193-9995242 7 bib FBtr0329984|FBtr0079929 9994780|9994657 9995538|9995538 AGACTGA 7mer-A1 dme-miR-14-3p 2L + 9995200 9995230 3'utr bib FlyBase G2858.1 TTGTAAATGCAAAACTAGACTGAACTTACCT 9 9995215 0.869672552 3 9 40 1 1.230448921 0 0.555555556 0.764705882 9 0 0 17 2L:9995200-9995230 7 13.5 669 FBgn0000180 1.333333333 0.05 0.08 10.125 270 168.75 1 1 1 0.2 dme-miR-14-3p 6mer3-8 AAGACT 2R 10029424 10029429 - 2R_10029424_10029429_- 0.92156907 0.994815815 0.958192443 0.051793238 CG1407 FBtr0339418|FBtr0088436|FBtr0339420|FBtr0339419 10029261|10029261|10029261|10029261 10029804|10029804|10029804|10029804 2R - 10029377 10029502 3'utr CG1407 FlyBase G21603.1 TATCCTCCGAAGATTTGTACCTTGCTAATGCATTCATGAAACCAACTATCCTTGTAGATATCGAAAGATCTTCAAGACTTAAACCTAATGATAAGCAATGAGATTTCAGTACACACTATTAACACA 36 10029432 0.931954344 13 31 253 0.880952381 1.091080469 0.071428571 0.111111111 0.238095238 36 3 2 37 2R:10029377-10029502 6 CG1407 FBtr0339419|FBtr0088436|FBtr0339420|FBtr0339418 10029261|10029261|10029261|10029261 10029804|10029804|10029804|10029804 AAGACT 6mer3-8 dme-miR-14-3p 2R - 10029406 10029500 3'utr CG1407 FlyBase G16401.1 TCCTCCGAAGATTTGTACCTTGCTAATGCATTCATGAAACCAACTATCCTTGTAGATATCGAAAGATCTTCAAGACTTAAACCTAATGATAAGCA 26 10029432 0.743163647 10 21 161 0.756756757 1.447158031 0.243243243 0.346153846 0.540540541 26 9 0 28 2R:10029406-10029500 6 16 670 FBgn0033474 835.29 47.03 72.28 0.019155024 0.340208378 0.221361372 3 3 3 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 2R 10029843 10029848 - 2R_10029843_10029848_- 0.944876562 0.634079125 0.789477843 0.21976702 CG1407 FBtr0300719 10029713 10031507 2R - 10029792 10029872 stop_codon CG1407 FlyBase G21606.1 ATCCGTTGACAAGCGCTGATCCTGCCAAAGGCTTCCCACGCCCGCCGAATGGCGATCTGCCAGTTTAAATAATAACGTAGA 14 10029853 0.953639791 7 13 61 1 1.176091259 0.2 0.071428571 0.133333333 14 0 0 15 2R:10029792-10029872 6 CG1407 FBtr0300719 10029713 10031507 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 10029826 10029872 3'utr CG1407 FlyBase G16404.1 ATCCGTTGACAAGCGCTGATCCTGCCAAAGGCTTCCCACGCCCGCCG 5 10029854 0.880776931 3 5 19 1 0.954242509 0.333333333 0.6 0.777777778 5 0 0 9 2R:10029826-10029872 6 8 671 FBgn0033474 835.29 47.03 72.28 0.009577512 0.170104189 0.110680686 5 6 5.5 0.2 dme-miR-14-3p 7mer-A1 AGACTGA 2R 10036098 10036104 - 2R_10036098_10036104_- 0.82211392 0.822374042 0.822243981 0.000183918 oys FBtr0345630|FBtr0088434|FBtr0339416|FBtr0345629 10034593|10035771|10035534|10035534 10036943|10036943|10036943|10036943 2R - 10036088 10036126 3'utr oys FlyBase G21617.1 AAGTCAACCAAATCCTAACTTTAGACTGAAGCTATTGAC 45 10036106 0.688415768 5 45 251 1 1.748188027 0 0.177777778 0.339285714 45 0 0 56 2R:10036088-10036126 7 oys FBtr0339416|FBtr0345629|FBtr0345630|FBtr0088434 10035534|10035534|10034593|10035771 10036943|10036943|10036943|10036943 AGACTGA 7mer-A1 dme-miR-14-3p 2R - 10036067 10036121 3'utr oys FlyBase G16412.1 AACCAAATCCTAACTTTAGACTGAAGCTATTGACATTTACTAAGCAAACAAAAAG 20 10036106 0.967176757 6 20 108 1 1.544068044 0 0.45 0.685714286 20 0 0 35 2R:10036067-10036121 7 32 672 FBgn0033476 2953.663333 97.33666667 148.7366667 0.010834004 0.328755865 0.215145335 2 2 2 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 10071028 10071034 - 2R_10071028_10071034_- 0.658819504 0.65909384 0.658956672 0.000193959 CG1371 FBtr0088428 10070979 10071210 2R - 10070963 10071073 3'utr CG1371 FlyBase G21645.1 ATTTTTCACTTTCCATACATAGATTGAGGCAAGTTTATTTGTGTTCGTTATCCACTCTTATAGCTAAAATAAATAAATACAATTAAATAGATTAATTAGACAAGGCTGTTC 125 10071035 0.991200133 11 124 1316 0.993506494 2.184691431 0.181818182 0.16 0.318181818 125 1 0 153 2R:10070963-10071073 7 CG1371 FBtr0088428 10070979 10071210 TGTGTTC 7mer-m8 dme-miR-317-3p 2R - 10070995 10071064 3'utr CG1371 FlyBase G16436.1 TTTCCATACATAGATTGAGGCAAGTTTATTTGTGTTCGTTATCCACTCTTATAGCTAAAATAAATAAATA 71 10071035 0.851982903 7 70 724 0.99 1.995635195 0.18 0.323943662 0.52 71 1 0 99 2R:10070995-10071064 7 82 673 FBgn0033482 1240.746667 38.63666667 59.06666667 0.066089237 2.122336295 1.388261851 1 1 1 0.2 dme-miR-1003-3p 7mer-A1 TGTGAGA 2R 10071122 10071128 - 2R_10071122_10071128_- 0.58114683 0.590515181 0.585831005 0.006624459 CG1371 FBtr0088428 10070979 10071210 2R - 10071111 10071177 3'utr CG1371 FlyBase G21647.1 AGTCACATTTCGAGGTATTCGCGGTAGGTATTCATTTGGTTTTTGTTTCTGTGAGATTTTGTTTAAC 28 10071131 0.668112048 12 25 342 0.947368421 1.255272505 0.447368421 0.25 0.447368421 28 1 1 36 2R:10071111-10071177 7 CG1371 FBtr0088428 10070979 10071210 TGTGAGA 7mer-A1 dme-miR-1003-3p 2R - 10071110 10071251 stop_codon CG1371 FlyBase G16438.1 AGATAAATGCCATCAAGAAGAAAAAGACCAAGAAGATTTAGTTCCGACTGATAGTCGCATTAGTTGTTCAATTTAGTCACATTTCGAGGTATTCGCGGTAGGTATTCATTTGGTTTTTGTTTCTGTGAGATTTTGTTTAACC 32 10071132 0.991875272 16 29 315 0.962264151 1.707570176 0.113207547 0.46875 0.679245283 32 2 0 51 2R:10071110-10071251 7 17 674 FBgn0033482 1240.746667 38.63666667 59.06666667 0.013701427 0.439996549 0.287810384 3 4 3.5 0.2 dme-miR-980-3p 8mer-A1 GGCAGCTA 2R 10095831 10095838 + 2R_10095831_10095838_+ 0.668436502 0.668170004 0.668303253 0.000188444 CG2269 FBtr0088407|FBtr0305653|FBtr0088408|FBtr0088409 10095242|10095242|10095242|10095242 10096416|10096416|10096416|10096416 2R + 10095811 10095858 3'utr CG2269 FlyBase G14538.1 TGAAAGGCAGAGCTCACATTGGCAGCTAGTCCTCCAAAGTCACCGTCA 17 10095829 0.93294433 3 17 87 1 1.301029996 0.1 0.117647059 0.25 17 0 0 20 2R:10095811-10095858 8 CG2269 FBtr0088408|FBtr0088409|FBtr0088407|FBtr0305653 10095242|10095242|10095242|10095242 10096416|10096416|10096416|10096416 GGCAGCTA 8mer-A1 dme-miR-980-3p 2R + 10095810 10095857 3'utr CG2269 FlyBase G11062.1 ATGAAAGGCAGAGCTCACATTGGCAGCTAGTCCTCCAAAGTCACCGTC 8 10095829 0.968057719 3 8 43 1 1.146128036 0 0.5 0.714285714 8 0 0 14 2R:10095810-10095857 8 12.5 675 FBgn0033484 2.333333333 0.08 0.12 5.357142857 156.25 104.1666667 2 2 2 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 2R 10098489 10098494 + 2R_10098489_10098494_+ 0.782420409 0.799921781 0.791171095 0.012375359 Jra FBtr0088411|FBtr0088410 10098135|10098135 10098556|10098556 2R + 10098453 10098560 3'utr Jra FlyBase G14546.1 GTTATTAGTATAAGCTAGTGTTAATCAAGTATTATCTGTGTTGAACGTAAGATAATATGTAATGTACTTTTAAAATATACGTATATTTTCTGCACTTGATATATACAT 93 10098486 0.988045796 22 84 841 0.914529915 1.330413773 0.444444444 0.239130435 0.401709402 92 6 4 107 2R:10098453-10098560 6 Jra FBtr0088411|FBtr0088410 10098135|10098135 10098556|10098556 TGTGTT 6mer3-8 dme-miR-317-3p 2R + 10098313 10098546 3'utr Jra FlyBase G11068.1 CGAACTCCTGGAGGAGGAGAGCGATAACGAACAGCCTCTGGTGCTCTACATCCTCGCGGACGACGCAACCTGAGGCTTTGTGCCTTTCTTTGGTTTTAGCTGCAATATCTGAAATGCTTCTTAAGTGTTTTGTTTACTTAGTTATTAGTATAAGCTAGTGTTAATCAAGTATTATCTGTGTTGAACGTAAGATAATATGTAATGTACTTTTAAAATATACGTATATTTTCTGCA 109 10098487 0.989263631 39 93 869 0.875776398 0.973127854 0.329192547 0.376146789 0.577639752 109 6 14 141 2R:10098313-10098546 6 48.5 676 FBgn0001291 1037.55 83.52666667 128.0966667 0.046744735 0.580652885 0.378620313 3 2 2.5 0.2 dme-miR-970-3p 6mer2-7 CTTATG 2R 10108425 10108430 + 2R_10108425_10108430_+ 0.825249914 0.762789197 0.794019556 0.044166385 14-3-3zeta FBtr0088418|FBtr0332917|FBtr0088412|FBtr0088414|FBtr0100183|FBtr0088416|FBtr0088419|FBtr0332916|FBtr0088415|FBtr0088417|FBtr0088413 10107621|10107621|10107621|10107621|10107621|10107621|10107621|10107621|10107621|10107621|10107621 10109687|10108474|10109687|10109687|10108474|10108474|10109687|10109687|10109687|10109687|10108474 2R + 10108378 10108462 3'utr 14-3-3zeta FlyBase G14563.1 CAACAACAACCAAGCGAACCAAATGAGAAAACAAAAATAAAAACAAACTTATGTATTATTTGTAATTCTTTTTCTAAACAAATAA 19 10108427 0.97542098 10 18 111 0.956521739 1.342422681 0.304347826 0.210526316 0.347826087 19 1 0 22 2R:10108378-10108462 6 14-3-3zeta FBtr0088419|FBtr0088416|FBtr0088417|FBtr0088413|FBtr0332916|FBtr0088415|FBtr0332917|FBtr0088414|FBtr0088418|FBtr0100183|FBtr0088412 10107621|10107621|10107621|10107621|10107621|10107621|10107621|10107621|10107621|10107621|10107621 10109687|10108474|10109687|10108474|10109687|10109687|10108474|10109687|10109687|10108474|10109687 CTTATG 6mer2-7 dme-miR-970-3p 2R + 10108410 10108466 3'utr 14-3-3zeta FlyBase G11085.1 AAAAATAAAAACAAACTTATGTATTATTTGTAATTCTTTTTCTAAACAAATAAAACC 14 10108426 0.848795061 7 12 124 0.904761905 0.977723605 0.285714286 0.357142857 0.571428571 14 1 1 19 2R:10108410-10108466 6 11 677 FBgn0004907 11710.04 810.41 1245.203333 0.000939365 0.013573376 0.008833899 -2 -1 -1.5 0.2 dme-miR-34-5p 6mer3-8 CACTGC 2R 10137036 10137041 + 2R_10137036_10137041_+ 0.999993204 0.990907443 0.995450324 0.006424631 gem FBtr0346634|FBtr0089758|FBtr0339428|FBtr0089759 10137011|10137011|10137011|10137011 10137472|10137472|10137472|10137472 2R + 10136948 10137059 stop_codon gem FlyBase G14608.1 ACGCGCTGGAGGTGCAGGCCGGCAAGGTGATCCTTAAGCTGATCAACAAGCAGGACAACAACTAAGCGATGTTCTGGCAACGCGTATGCACTGCAGTAGAGACCACCCGAGC 18 10137037 0.946080813 8 16 63 0.9 1.255272505 0.35 0.111111111 0.2 18 2 0 18 2R:10136948-10137059 6 gem FBtr0339428|FBtr0089759|FBtr0346634|FBtr0089758 10137011|10137011|10137011|10137011 10137472|10137472|10137472|10137472 CACTGC 6mer3-8 dme-miR-34-5p 2R + 10136979 10137107 stop_codon gem FlyBase G11114.1 CCTTAAGCTGATCAACAAGCAGGACAACAACTAAGCGATGTTCTGGCAACGCGTATGCACTGCAGTAGAGACCACCCGAGCAATCAAGTATAGTTTATAGCATTTACACGCAGTAAGATGGCACATCGA 13 10137034 0.96976766 10 12 70 0.9375 1.176091259 0.125 0.153846154 0.3125 13 1 0 15 2R:10136979-10137107 6 6.5 678 FBgn0050011 3271.46 66.12333333 101.57 0.00198688 0.098301154 0.063995274 -1 2 0.5 0.2 dme-miR-277-3p 7mer-A1 GCATTTA 2R 10137078 10137084 + 2R_10137078_10137084_+ 0.822455805 0.823341781 0.822898793 0.000626497 gem FBtr0346634|FBtr0089758|FBtr0339428|FBtr0089759 10137011|10137011|10137011|10137011 10137472|10137472|10137472|10137472 2R + 10137064 10137168 3'utr gem FlyBase G14609.1 AAGTATAGTTTATAGCATTTACACGCAGTAAGATGGCACATCGAAACCGTTTTCTATATAGGTTTTAATTTGTATGAGATTTCGCGCAGCAATTTTGAACAAGTA 27 10137075 0.830986318 14 24 239 0.903225806 1.146128036 0.258064516 0.148148148 0.258064516 27 2 1 28 2R:10137064-10137168 7 gem FBtr0339428|FBtr0089759|FBtr0346634|FBtr0089758 10137011|10137011|10137011|10137011 10137472|10137472|10137472|10137472 GCATTTA 7mer-A1 dme-miR-277-3p 2R + 10136979 10137107 stop_codon gem FlyBase G11114.1 CCTTAAGCTGATCAACAAGCAGGACAACAACTAAGCGATGTTCTGGCAACGCGTATGCACTGCAGTAGAGACCACCCGAGCAATCAAGTATAGTTTATAGCATTTACACGCAGTAAGATGGCACATCGA 13 10137096 0.96976766 10 12 70 0.9375 1.176091259 0.125 0.153846154 0.3125 13 1 0 15 2R:10136979-10137107 7 7 679 FBgn0050011 3271.46 66.12333333 101.57 0.002139717 0.105862782 0.068917988 3 -18 -7.5 0.2 dme-miR-92b-3p 6mer3-8 GTGCAA 2R 10137220 10137225 + 2R_10137220_10137225_+ 0.976006128 0.992387128 0.984196628 0.011583116 gem FBtr0346634|FBtr0089758|FBtr0339428|FBtr0089759 10137011|10137011|10137011|10137011 10137472|10137472|10137472|10137472 2R + 10137172 10137239 3'utr gem FlyBase G14610.1 AGCAAGCAGCCTCTAACCCTGTTCCCTAAAATCTTTGTTAAAGAACTAGTGCAAAATATTTAAGTTTC 59 10137218 0.919208087 6 56 351 0.973684211 1.568201724 0 0.220338983 0.394736842 59 1 1 74 2R:10137172-10137239 6 gem FBtr0339428|FBtr0089759|FBtr0346634|FBtr0089758 10137011|10137011|10137011|10137011 10137472|10137472|10137472|10137472 GTGCAA 6mer3-8 dme-miR-92b-3p 2R + 10137114 10137238 3'utr gem FlyBase G11115.1 TTTCTATATAGGTTTTAATTTGTATGAGATTTCGCGCAGCAATTTTGAACAAGTAAAAAGCAAGCAGCCTCTAACCCTGTTCCCTAAAATCTTTGTTAAAGAACTAGTGCAAAATATTTAAGTTT 30 10137218 0.9808813 7 27 193 0.911764706 1.491361694 0.088235294 0.172413793 0.294117647 29 3 0 31 2R:10137114-10137238 6 28 680 FBgn0050011 3271.46 66.12333333 101.57 0.00855887 0.423451127 0.27567195 2 2 2 0.2 dme-miR-317-3p 8mer-A1 TGTGTTCA 2R 10145966 10145973 - 2R_10145966_10145973_- 0.630866498 0.630824908 0.630845703 2.94E-05 KCNQ FBtr0310097|FBtr0310094|FBtr0299833|FBtr0301443|FBtr0310096|FBtr0310093|FBtr0310095|FBtr0301444 10145895|10145895|10145895|10145895|10145895|10145895|10145895|10145895 10146074|10146074|10146074|10146074|10146074|10146074|10146074|10146074 2R - 10145934 10145989 3'utr KCNQ FlyBase G21678.1 ATTTTGGGACATCATTTGTGTTCAATTAATTGGTAGCAAACAAATGAAAATCAAAC 6 10145974 0.990604435 3 6 60 1 0.77815125 0.166666667 0 0 6 0 0 6 2R:10145934-10145989 8 KCNQ FBtr0310096|FBtr0310093|FBtr0310095|FBtr0301444|FBtr0310097|FBtr0310094|FBtr0299833|FBtr0301443 10145895|10145895|10145895|10145895|10145895|10145895|10145895|10145895 10146074|10146074|10146074|10146074|10146074|10146074|10146074|10146074 TGTGTTCA 8mer-A1 dme-miR-317-3p 2R - 10145935 10145988 3'utr KCNQ FlyBase G16451.1 TTTTGGGACATCATTTGTGTTCAATTAATTGGTAGCAAACAAATGAAAATCAAA 7 10145974 0.987785899 4 7 55 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 2R:10145935-10145988 8 4.5 681 FBgn0033494 83.10666667 3.453333333 5.296666667 0.054147281 1.303088803 0.849590938 1 1 1 0.2 dme-bantam-3p 6mer3-8 TGATCT 2R 10156573 10156578 - 2R_10156573_10156578_- 0.98033194 0.977387913 0.978859927 0.002081722 mlt FBtr0088370|FBtr0331945|FBtr0088369 10156388|10155914|10156388 10156669|10156669|10156669 2R - 10156567 10156607 3'utr mlt FlyBase G21682.1 CTTCGTCCCCCGCCTGGTGCTACAACTTGTGATCTTGTACA 18 10156581 0.64123762 6 18 151 1 1.397940009 0.4 0.333333333 0.52 18 0 0 25 2R:10156567-10156607 6 mlt FBtr0331945|FBtr0088369|FBtr0088370 10155914|10156388|10156388 10156669|10156669|10156669 TGATCT 6mer3-8 dme-bantam-3p 2R - 10156569 10156592 3'utr mlt FlyBase G16454.1 GGTGCTACAACTTGTGATCTTGTA 10 10156572 0.675230975 4 8 74 0.833333333 0.698970004 0.416666667 0.2 0.333333333 10 1 1 10 2R:10156569-10156592 6 14 682 FBgn0265512 12.66666667 0.613333333 0.95 1.105263158 22.82608696 14.73684211 3 -6 -1.5 0.2 dme-miR-283-5p 8mer-m1 TGATATTT 2R 10307099 10307106 - 2R_10307099_10307106_- 0.477357651 0.481506287 0.479431969 0.002933503 JhI-1 FBtr0088360 10307028 10307304 2R - 10307089 10307145 3'utr JhI-1 FlyBase G21693.1 AATTAATAGGGCACCTTTGCTTGTATCTGTATATGCTTGTGATATTTGCATTTGCAT 26 10307109 0.993419074 8 22 278 0.805555556 0.763427994 0.194444444 0.346153846 0.527777778 26 3 4 29 2R:10307089-10307145 8 JhI-1 FBtr0088360 10307028 10307304 TGATATTT 8mer-m1 dme-miR-283-5p 2R - 10307090 10307121 3'utr JhI-1 FlyBase G16459.1 ATCTGTATATGCTTGTGATATTTGCATTTGCA 15 10307109 0.675132212 6 13 142 0.857142857 0.653212514 0.19047619 0.333333333 0.523809524 15 0 3 18 2R:10307090-10307121 8 18.5 683 FBgn0028426 503.2766667 22.61333333 34.73333333 0.036759105 0.818101415 0.532629559 3 3 3 0.2 dme-miR-965-3p 8mer-A1 TACGCTTA 2R 10469472 10469479 + 2R_10469472_10469479_+ 0.6253144 0.624369246 0.624841823 0.000668357 CG11777 FBtr0088273 10469445 10469643 2R + 10469375 10469489 stop_codon CG11777 FlyBase G14666.1 AAGAACTATCGTCCCCATGTGGACAAGAAGATCAATGGAGTAACTATACATGCCAATCCTTTGGCGACGTGATAGAGATAGAGACAAAGGCCAATCGTACGCTTAAAATGAAATA 26 10469470 0.94123465 13 26 99 1 1.491361694 0.129032258 0.192307692 0.322580645 26 0 0 31 2R:10469375-10469489 8 CG11777 FBtr0088273 10469445 10469643 TACGCTTA 8mer-A1 dme-miR-965-3p 2R + 10469432 10469486 stop_codon CG11777 FlyBase G11166.1 CCTTTGGCGACGTGATAGAGATAGAGACAAAGGCCAATCGTACGCTTAAAATGAA 17 10469471 0.907770258 4 13 57 0.857142857 0.954242509 0.142857143 0.235294118 0.380952381 17 2 1 18 2R:10469432-10469486 8 8.5 684 FBgn0033527 170.1366667 31.64666667 48.74 0.049959836 0.268590689 0.174394748 2 1 1.5 0.2 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 10481832 10481839 + 2R_10481832_10481839_+ 0.602417104 0.565665848 0.584041476 0.025987093 CG17765 FBtr0088274 10481588 10481886 2R + 10481747 10481856 3'utr CG17765 FlyBase G14674.2 ATCACTCCACAGTCATATTGCAATCTCCTGGTATCAGAATCAAATTTCAAAAGTATTTGTTAACGCAGTTCGACTCAATAATCATAGTACAAAGTCTCTTGCGCCTAATA 47 10481830 0.979817235 12 44 323 0.948275862 1.740362689 0.103448276 0.191489362 0.344827586 47 3 0 55 2R:10481747-10481856 8 CG17765 FBtr0088274 10481588 10481886 AGTACAAA 8mer-A1 dme-miR-305-5p 2R + 10481660 10481855 3'utr CG17765 FlyBase G11170.1 ACAGCCAACAGTGGATGATCATAAATTTCGCGACTGGTGCATTTTTCTTAAATTTTCAACGGTGTTAGCTTTTTAATATGTAAATGAATCACTCCACAGTCATATTGCAATCTCCTGGTATCAGAATCAAATTTCAAAAGTATTTGTTAACGCAGTTCGACTCAATAATCATAGTACAAAGTCTCTTGCGCCTAAT 36 10481830 0.984866267 19 35 289 0.98 1.69019608 0.12 0.25 0.46 36 1 0 49 2R:10481660-10481855 8 22 685 FBgn0033529 2313.66 293.68 451.0566667 0.009508744 0.074911468 0.048774359 2 2 2 0.2 dme-miR-31a-5p 8mer-A1 TCTTGCCA 2R 10491536 10491543 - 2R_10491536_10491543_- 0.613030272 0.616244261 0.614637267 0.002272641 lola FBtr0089361 10491258 10491941 2R - 10491523 10491581 5'utr lola FlyBase G21738.1 TAGTTCTACTGTGGTTGGTGTTCTCAAAACTCAAATATTCTTGCCAGCAATTAGGGCTT 11 10491544 0.982935464 5 10 82 0.916666667 1.041392685 0.083333333 0.090909091 0.166666667 11 1 0 11 2R:10491523-10491581 8 lola FBtr0089361 10491258 10491941 TCTTGCCA 8mer-A1 dme-miR-31a-5p 2R - 10491534 10491578 5'utr lola FlyBase G16492.1 TTCTACTGTGGTTGGTGTTCTCAAAACTCAAATATTCTTGCCAGC 6 10491544 0.982279788 3 5 40 0.888888889 0.602059991 0 0.333333333 0.555555556 6 0 1 8 2R:10491534-10491578 8 5.5 686 FBgn0005630 6593.74 266.74 407.4566667 0.000834124 0.02061933 0.013498368 1 1 1 0.2 dme-bantam-3p 8mer-A1 TGATCTCA 2R 10496614 10496621 - 2R_10496614_10496621_- 0.625223449 0.626348331 0.62578589 0.000795424 lola FBtr0089360 10496293 10497178 2R - 10496594 10496646 5'utr lola FlyBase G21752.1 TGTATAAATCCTTAGGAAAACTCAATGATCTCAATGAACTTTTTCTTGATTTT 473 10496621 0.767112619 8 457 2259 0.964028777 1.72916479 0.215827338 0.150105708 0.276978417 473 11 9 536 2R:10496594-10496646 8 lola FBtr0089360 10496293 10497178 TGATCTCA 8mer-A1 dme-bantam-3p 2R - 10496595 10496650 5'utr lola FlyBase G16503.1 GATGTGTATAAATCCTTAGGAAAACTCAATGATCTCAATGAACTTTTTCTTGATTT 375 10496621 0.763432461 6 366 1827 0.97810219 2.030194785 0.260948905 0.309333333 0.527372263 375 8 4 536 2R:10496595-10496650 8 422.5 687 FBgn0005630 6593.74 266.74 407.4566667 0.064075927 1.583939417 1.036920081 0 0 0 0.2 dme-bantam-3p 6mer3-8 TGATCT 2R 10496953 10496958 - 2R_10496953_10496958_- 0.57905135 0.565728442 0.572389896 0.009420713 lola FBtr0089360 10496293 10497178 2R - 10496929 10497062 5'utr lola FlyBase G21753.1 AGGTTTCGGGTCCTTAGTGCCGGGTTTGCTTCAGTCTGAGTCCAAAGTCCTAATCACACAGAGTTCAGTCCAGTCCAGAGCGCGGTTTTGTGTAATTTTCCAAATGATCTTGAAACATATAGTCGTCTTTACAC 125 10496958 0.979930108 14 122 852 0.979310345 2.152288344 0.103448276 0.152 0.268965517 125 3 0 142 2R:10496929-10497062 6 lola FBtr0089360 10496293 10497178 TGATCT 6mer3-8 dme-bantam-3p 2R - 10496931 10497019 5'utr lola FlyBase G16504.1 AAAGTCCTAATCACACAGAGTTCAGTCCAGTCCAGAGCGCGGTTTTGTGTAATTTTCCAAATGATCTTGAAACATATAGTCGTCTTTAC 95 10496958 0.846201207 12 95 650 1 2.100370545 0.023809524 0.273684211 0.452380952 95 0 0 126 2R:10496931-10497019 6 87 688 FBgn0005630 6593.74 266.74 407.4566667 0.013194333 0.326160306 0.213519638 0 0 0 0.2 dme-miR-282-5p 6mer2-7 GAGGCT 2R 10507648 10507653 - 2R_10507648_10507653_- 0.997409262 0.993506185 0.995457724 0.002759908 lola FBtr0343132|FBtr0089350 10507241|10507421 10508346|10508346 2R - 10507630 10507688 5'utr lola FlyBase G21774.1 AAAAATTGAAGAAAATTGTAAACTTATCTATATTGGAGGCTTGCAAAAATAATTTTGTA 106 10507655 0.982049653 8 104 801 0.985507246 2.133538908 0 0.283018868 0.449275362 106 2 0 136 2R:10507630-10507688 6 lola FBtr0089350|FBtr0343132 10507421|10507241 10508346|10508346 GAGGCT 6mer2-7 dme-miR-282-5p 2R - 10507625 10507671 5'utr lola FlyBase G16523.1 GTAAACTTATCTATATTGGAGGCTTGCAAAAATAATTTTGTAAGAAT 81 10507655 0.799882612 4 79 595 1 2.08278537 0.008264463 0.3875 0.595041322 80 0 0 121 2R:10507625-10507671 6 91 689 FBgn0005630 6593.74 266.74 407.4566667 0.013800969 0.341156182 0.223336633 2 2 2 0.2 dme-miR-2a-2-5p 6mer3-8 TGATGA 2R 10515463 10515468 - 2R_10515463_10515468_- 0.980579262 0.824541551 0.902560406 0.110335316 lola FBtr0089348 10515012 10515540 2R - 10515423 10515601 stop_codon lola FlyBase G21804.1 ACAAAGCTCCCACCTAAAGCGACACCTTGAGAGCGGTGTCTGTGTCAAATATTACTTATGAGATAATGTTTTCTTTAAAATCAAATAGAATAAGCGTTATCCCAATAGGCAGAAGATCAACTGATGATCGAAATGATGATCATGAAAATGAAGATGTAGAACATGAACAAGATTATATA 38 10515467 0.969055673 16 37 211 0.97826087 1.653212514 0.239130435 0.184210526 0.326086957 38 1 0 45 2R:10515423-10515601 6 lola FBtr0089348 10515012 10515540 TGATGA 6mer3-8 dme-miR-2a-2-5p 2R - 10515452 10515495 5'utr lola FlyBase G16540.1 AGGCAGAAGATCAACTGATGATCGAAATGATGATCATGAAAATG 6 10515467 0.944063275 3 6 26 1 0.954242509 0.333333333 0.333333333 0.555555556 6 0 0 9 2R:10515452-10515495 6 8 690 FBgn0005630 6593.74 266.74 407.4566667 0.001213272 0.029991752 0.01963399 -1 -1 -1 0.2 dme-miR-1003-3p 7mer-A1 TGTGAGA 2R 10615726 10615732 + 2R_10615726_10615732_+ 0.809694821 0.809023838 0.809359329 0.000474469 psq FBtr0088278|FBtr0346958|FBtr0088282|FBtr0330607|FBtr0100606|FBtr0088281|FBtr0088277|FBtr0088276|FBtr0088275|FBtr0100607|FBtr0088280|FBtr0088279 10614840|10614840|10614840|10615080|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840 10616248|10617280|10616248|10617280|10616248|10616248|10616248|10616248|10616248|10616248|10616248|10616248 2R + 10615703 10615790 3'utr psq FlyBase G14696.1 GCTTTGTTATAATTTTCGCTTAGTGTGAGACTGAAAGTGCGCCTAAAACTGTTGAAAAACCCCATGCCCAATATTATAGTGAAGACGC 377 10615728 0.968846894 15 358 2591 0.947867299 1.903089987 0.462085308 0.103448276 0.199052133 377 18 4 400 2R:10615703-10615790 7 psq FBtr0088275|FBtr0088280|FBtr0088277|FBtr0100607|FBtr0088276|FBtr0088279|FBtr0100606|FBtr0088281|FBtr0088278|FBtr0346958|FBtr0088282|FBtr0330607 10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10615080 10616248|10616248|10616248|10616248|10616248|10616248|10616248|10616248|10616248|10617280|10616248|10617280 TGTGAGA 7mer-A1 dme-miR-1003-3p 2R + 10615704 10615758 3'utr psq FlyBase G11187.1 CTTTGTTATAATTTTCGCTTAGTGTGAGACTGAAAGTGCGCCTAAAACTGTTGAA 196 10615728 0.846520173 10 175 1334 0.904761905 1.822821645 0.510204082 0.397959184 0.598639456 196 25 3 266 2R:10615704-10615758 7 267.5 691 FBgn0263102 4429.833333 90.05333333 137.5466667 0.060386019 2.970461948 1.944794494 -2 -2 -2 0.2 dme-miR-33-5p 7mer-A1 AATGCAA 2R 10616732 10616738 + 2R_10616732_10616738_+ 0.505607371 0.43757786 0.471592615 0.048104121 psq FBtr0346958|FBtr0330607 10614840|10615080 10617280|10617280 2R + 10616615 10616759 3'utr psq FlyBase G14703.1 ATACATTTGAATAGATTTTTTTAGTTGTTAGCTGACCTAGGGGAACAGGTATCTGAATATTATAAAAATCAAATGTTGCAAATTAATTTATTTTAGCGTTATAGACCCGTAGAACTGAATGCAATATGCTTACCTTAAAACTCAA 73 10616731 0.802353941 22 71 417 0.988764045 1.944482672 0.123595506 0.205479452 0.348314607 73 1 0 88 2R:10616615-10616759 7 psq FBtr0346958|FBtr0330607 10614840|10615080 10617280|10617280 AATGCAA 7mer-A1 dme-miR-33-5p 2R + 10616621 10616754 3'utr psq FlyBase G11192.1 TTGAATAGATTTTTTTAGTTGTTAGCTGACCTAGGGGAACAGGTATCTGAATATTATAAAAATCAAATGTTGCAAATTAATTTATTTTAGCGTTATAGACCCGTAGAACTGAATGCAATATGCTTACCTTAAAA 67 10616732 0.971410383 18 62 370 0.923913043 1.929418926 0.195652174 0.28358209 0.47826087 67 7 0 85 2R:10616621-10616754 7 51.5 692 FBgn0263102 4429.833333 90.05333333 137.5466667 0.01162572 0.571883328 0.374418379 1 0 0.5 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 10640620 10640627 + 2R_10640620_10640627_+ 0.625133005 0.394007932 0.509570469 0.163430126 CG11883 FBtr0113063|FBtr0339461|FBtr0088283 10640587|10640587|10640587 10640990|10641807|10640990 2R + 10640566 10640634 stop_codon CG11883 FlyBase G14707.1 TCACCGAAGCTGAGGACGAGTAAAGAACTACCAAAAGTCATTTGATTTACAATTTGCATTTAATTTATT 13 10640619 0.987557989 5 12 103 0.9375 1.176091259 0 0.230769231 0.375 13 1 0 15 2R:10640566-10640634 8 CG11883 FBtr0088283|FBtr0339461|FBtr0113063 10640587|10640587|10640587 10640990|10641807|10640990 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 10640558 10640631 stop_codon CG11883 FlyBase G11194.1 TTCCACAATCACCGAAGCTGAGGACGAGTAAAGAACTACCAAAAGTCATTTGATTTACAATTTGCATTTAATTT 8 10640594 0.979241583 5 8 51 1 1.041392685 0 0.375 0.545454545 8 0 0 11 2R:10640558-10640631 8 5 693 FBgn0033538 276.0933333 9.15 14.24666667 0.018109818 0.546448087 0.350959289 1 26 13.5 0.2 dme-miR-34-5p 6mer2-7 ACTGCC 2R 10737392 10737397 + 2R_10737392_10737397_+ 0.931236963 0.905354164 0.918295563 0.018301903 CG7220 FBtr0088216|FBtr0088217|FBtr0339465|FBtr0088219 10737369|10737369|10737369|10737369 10738370|10738370|10738370|10738370 2R + 10737378 10737432 5'utr-coding CG7220 FlyBase G14718.1 TGCCATTTACTAATACTGCCTGCTATTGTTTGCTTTGCGCATCCAACCAAAAAAA 15 10737391 0.988080887 6 14 139 0.863636364 0.67669361 0.045454545 0.2 0.454545455 15 0 3 19 2R:10737378-10737432 6 CG7220 FBtr0339465|FBtr0088219|FBtr0088216|FBtr0088217 10737369|10737369|10737369|10737369 10738370|10738370|10738370|10738370 ACTGCC 6mer2-7 dme-miR-34-5p 2R + 10737363 10737424 stop_codon CG7220 FlyBase G11200.1 CTGTTTAGTTAAAATTGCCATTTACTAATACTGCCTGCTATTGTTTGCTTTGCGCATCCAAC 10 10737390 0.986760763 7 10 90 1 1.176091259 0 0.3 0.533333333 10 0 0 15 2R:10737363-10737424 6 10 694 FBgn0033544 368.3233333 29.77 45.41666667 0.027150058 0.335908633 0.220183486 1 2 1.5 0.2 dme-miR-999-3p 6mer3-8 AGTTAA 2R 10737984 10737989 + 2R_10737984_10737989_+ 0.952928154 0.650873589 0.801900872 0.213584856 CG7220 FBtr0088216|FBtr0088217|FBtr0339465|FBtr0088219 10737369|10737369|10737369|10737369 10738370|10738370|10738370|10738370 2R + 10737959 10737998 3'utr CG7220 FlyBase G14722.1 TGAGAAGCAAAACTCATGCGATCATAGTTAAGATTATGAC 8 10737975 0.953794436 2 8 43 1 1.041392685 0.272727273 0.25 0.454545455 8 0 0 11 2R:10737959-10737998 6 CG7220 FBtr0339465|FBtr0088219|FBtr0088216|FBtr0088217 10737369|10737369|10737369|10737369 10738370|10738370|10738370|10738370 AGTTAA 6mer3-8 dme-miR-999-3p 2R + 10737973 10738050 3'utr CG7220 FlyBase G11202.1 CATGCGATCATAGTTAAGATTATGACATTTTAAATGTATTAGCAGCCATATCCCCGATCGCTCTCATTGTCACCAGTC 12 10737986 0.979170694 9 10 75 0.882352941 1.176091259 0.411764706 0.333333333 0.529411765 12 2 0 15 2R:10737973-10738050 6 5.5 695 FBgn0033544 368.3233333 29.77 45.41666667 0.014932532 0.184749748 0.121100917 9 -2 3.5 0.2 dme-miR-965-3p 7mer-A1 ACGCTTA 2R 10738705 10738711 - 2R_10738705_10738711_- 0.823348773 0.82333667 0.823342722 8.56E-06 Mat1 FBtr0088255 10738615 10738757 2R - 10738666 10738747 3'utr Mat1 FlyBase G21856.1 AAATATCCTTTAATGGTCGCACAACCAGAGCACTGAACGCTTAATTTTGTTGAACAAATGTGTCCTATACGAATCCATTCAG 53 10738703 0.967739616 10 51 303 0.95 1.755874856 0.116666667 0.113207547 0.216666667 53 3 0 57 2R:10738666-10738747 7 Mat1 FBtr0088255 10738615 10738757 ACGCTTA 7mer-A1 dme-miR-965-3p 2R - 10738625 10738736 3'utr Mat1 FlyBase G16585.1 AATGGTCGCACAACCAGAGCACTGAACGCTTAATTTTGTTGAACAAATGTGTCCTATACGAATCCATTCAGTTAACTCGTAACTTAATATATGTTAAATAAATAAATGCTAT 54 10738703 0.760862295 14 53 312 0.987951807 1.612783857 0.048192771 0.37037037 0.590361446 54 0 1 82 2R:10738625-10738736 7 43 696 FBgn0024956 305.3266667 31.30333333 48.17 0.140832769 1.373655628 0.892671787 -8 -8 -8 0.2 dme-miR-7-5p 6mer2-7 TCTTCC 2R 10740586 10740591 - 2R_10740586_10740591_- 0.819081779 0.999911461 0.90949662 0.127865907 CG33144 FBtr0088254|FBtr0302517 10740394|10740052 10740928|10740928 2R - 10740532 10740612 3'utr CG33144 FlyBase G21863.1 CTGTATAAATCGAGTAGGTTCTCTTCCTAGCGCATAAGTTAGTCTAAATATATTAGGAGTACGCCTCGTATTGCAACAGTG 11 10740589 0.766086641 3 10 91 0.923076923 1.079181246 0.153846154 0.181818182 0.307692308 11 1 0 12 2R:10740532-10740612 6 CG33144 FBtr0302517|FBtr0088254 10740052|10740394 10740928|10740928 TCTTCC 6mer2-7 dme-miR-7-5p 2R - 10740578 10740608 3'utr CG33144 FlyBase G16589.1 ATAAATCGAGTAGGTTCTCTTCCTAGCGCAT 5 10740590 0.932209028 3 4 29 0.833333333 0.698970004 0.333333333 0.2 0.333333333 5 1 0 5 2R:10740578-10740608 6 6 697 FBgn0053144 479.6233333 12.36 18.86333333 0.012509817 0.485436893 0.318077399 -2 -1 -1.5 0.2 dme-miR-283-5p 8mer-m1 TGATATTT 2R 10740761 10740768 - 2R_10740761_10740768_- 0.525426499 0.53428924 0.529857869 0.006266875 CG33144 FBtr0088254|FBtr0302517 10740394|10740052 10740928|10740928 2R - 10740705 10740808 3'utr CG33144 FlyBase G21864.1 AGTTATTACAATTATAATTGTATATGTGTTAACTAAATTGTGATATTTACAGTGATTCGATTTCTAATTGAATCGACAAATTTGTTGAGAACCTATACAAAGAC 118 10740771 0.99070226 17 110 1145 0.946666667 1.45331834 0.573333333 0.220338983 0.386666667 118 4 4 142 2R:10740705-10740808 8 CG33144 FBtr0302517|FBtr0088254 10740052|10740394 10740928|10740928 TGATATTT 8mer-m1 dme-miR-283-5p 2R - 10740732 10740882 3'utr CG33144 FlyBase G16590.1 AGCCTGTAAATGCAGCTGCTGTAATTACTGGTAGTTTCTATTGTTAATGACGACAGCTTACGTACATTTATTTTAGTTATTACAATTATAATTGTATATGTGTTAACTAAATTGTGATATTTACAGTGATTCGATTTCTAATTGAATCGAC 94 10740771 0.990140207 20 90 895 0.950704225 2.130333768 0.521126761 0.361702128 0.577464789 94 7 0 135 2R:10740732-10740882 8 95 698 FBgn0053144 479.6233333 12.36 18.86333333 0.198072098 7.686084142 5.036225482 3 3 3 0.2 dme-bantam-3p 6mer3-8 TGATCT 2R 10815752 10815757 + 2R_10815752_10815757_+ 0.991514525 0.994538002 0.993026263 0.002137937 CG7222 FBtr0088223|FBtr0345945 10815109|10815109 10815781|10815781 2R + 10815711 10815807 3'utr CG7222 FlyBase G14735.1 ATACAGAGTTCATAAGCCGCATGTCTATCAAAACACCAAAATGATCTGTTATCAATAAATATATGTACTTGACATTCTGATATTTACACATGCATAA 282 10815752 0.908737901 17 275 1699 0.973529412 2.042706739 0.017647059 0.187943262 0.326470588 282 7 2 331 2R:10815711-10815807 6 CG7222 FBtr0088223|FBtr0345945 10815109|10815109 10815781|10815781 TGATCT 6mer3-8 dme-bantam-3p 2R + 10815729 10815797 3'utr CG7222 FlyBase G11215.1 GCATGTCTATCAAAACACCAAAATGATCTGTTATCAATAAATATATGTACTTGACATTCTGATATTTAC 149 10815752 0.899534462 9 144 862 0.958333333 2.315970345 0.009259259 0.33557047 0.541666667 149 9 0 207 2R:10815729-10815797 6 199 699 FBgn0033551 801.0633333 64.22666667 98.17333333 0.248419809 3.098401495 2.027027027 0 0 0 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 10839439 10839444 - 2R_10839439_10839444_- 0.755361806 0.755276499 0.755319153 6.03E-05 CG30015 FBtr0113357|FBtr0113357|FBtr0113357|FBtr0306393|FBtr0306393|FBtr0306393|FBtr0331939|FBtr0331939|FBtr0331939|FBtr0088243|FBtr0088243|FBtr0088243|FBtr0113356|FBtr0113356|FBtr0113356|FBtr0331938|FBtr0331938|FBtr0331938|FBtr0088242|FBtr0088242|FBtr0088242 10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100 10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902 2R - 10839314 10839518 3'utr CG30015 FlyBase G21898.1 CTGTGCATGTCGAAAAATGTTTTGAAATAAACTAAATTACGTCTATTAATTGAGAGTCAAGAAAACTGTAAGGACTGTGAGTATAATTACGCGTAGCAAGGAGCCTGATATTCGAAACATTTGATTTACTTTAAGTTGATAATTTGCAAGCTTTTAATTGGTAGAAGAGATTGATTTTACTATTTAGACTAACTATTATTACTTA 61 10839451 0.980851047 19 54 398 0.918918919 1.531478917 0.202702703 0.163934426 0.310810811 61 5 1 68 2R:10839314-10839518 6 CG30015 FBtr0331939|FBtr0331939|FBtr0331939|FBtr0306393|FBtr0306393|FBtr0306393|FBtr0113357|FBtr0113357|FBtr0113357|FBtr0088242|FBtr0088242|FBtr0088242|FBtr0331938|FBtr0331938|FBtr0331938|FBtr0113356|FBtr0113356|FBtr0113356|FBtr0088243|FBtr0088243|FBtr0088243 10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100 10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 10839349 10839480 3'utr CG30015 FlyBase G16612.1 ACGTCTATTAATTGAGAGTCAAGAAAACTGTAAGGACTGTGAGTATAATTACGCGTAGCAAGGAGCCTGATATTCGAAACATTTGATTTACTTTAAGTTGATAATTTGCAAGCTTTTAATTGGTAGAAGAGA 45 10839441 0.971497802 14 38 236 0.884057971 1.484299839 0.202898551 0.422222222 0.623188406 45 7 1 61 2R:10839349-10839480 6 31.5 700 FBgn0050015 810.93 16.1 24.71 0.03884429 1.956521739 1.274787535 7 -3 2 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2R 10839852 10839857 - 2R_10839852_10839857_- 0.618040273 0.952118457 0.785079365 0.236228961 CG30015 FBtr0113357|FBtr0306393|FBtr0331939|FBtr0088243|FBtr0113356|FBtr0331938|FBtr0088242 10839100|10839100|10839100|10839100|10839100|10839100|10839100 10839902|10839902|10839902|10839902|10839902|10839902|10839902 2R - 10839799 10839879 3'utr CG30015 FlyBase G21902.1 TAAATACTCCGCCGACCAGACTGTACCTAGCCTAGCTGCAATCCAAGTGCTTTTGTCTAGTGATGCGCTCTCCTTCAAGCA 27 10839858 0.917414661 8 25 135 0.933333333 1.146128036 0.1 0.111111111 0.2 27 1 1 28 2R:10839799-10839879 6 CG30015 FBtr0331939|FBtr0306393|FBtr0113357|FBtr0088242|FBtr0331938|FBtr0113356|FBtr0088243 10839100|10839100|10839100|10839100|10839100|10839100|10839100 10839902|10839902|10839902|10839902|10839902|10839902|10839902 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2R - 10839825 10839875 3'utr CG30015 FlyBase G16614.1 TACTCCGCCGACCAGACTGTACCTAGCCTAGCTGCAATCCAAGTGCTTTTG 18 10839858 0.887153548 6 14 76 0.964285714 1.431363764 0.214285714 0.388888889 0.607142857 18 1 0 27 2R:10839825-10839875 6 15 701 FBgn0050015 810.93 16.1 24.71 0.018497281 0.931677019 0.607041684 1 1 1 0.2 dme-miR-307a-3p 7mer-A1 GTTGTGA 2R 10892582 10892588 + 2R_10892582_10892588_+ 0.823219622 0.771977267 0.797598445 0.036233778 CG30020 FBtr0088235|FBtr0339521 10892557|10892557 10893191|10892787 2R + 10892544 10892592 stop_codon CG30020 FlyBase G14783.1 AATGGGCAGCCCTAAGGAGCTGACGATAATTCCAAGTAGTTGTGAACTT 6 10892572 0.971432831 4 6 35 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2R:10892544-10892592 7 CG30020 FBtr0339521|FBtr0088235 10892557|10892557 10892787|10893191 GTTGTGA 7mer-A1 dme-miR-307a-3p 2R + 10892558 10892593 3'utr CG30020 FlyBase G11252.1 AGGAGCTGACGATAATTCCAAGTAGTTGTGAACTTA 7 10892573 0.984597105 4 5 44 0.705882353 0.602059991 0.117647059 1 1 7 3 2 12 2R:10892558-10892593 7 5.5 702 FBgn0050020 876.3433333 22.63666667 34.61333333 0.006276079 0.242968635 0.158898305 10 9 9.5 0.2 dme-miR-276a-3p 6mer2-7 GTTCCT 2R 10892656 10892661 + 2R_10892656_10892661_+ 0.687059668 0.913208454 0.800134061 0.15991135 CG30020 FBtr0088235|FBtr0339521 10892557|10892557 10893191|10892787 2R + 10892617 10892678 3'utr CG30020 FlyBase G14784.1 AATCGCACAATGTACAAAGTTTGATATAGTCTAAGTACTGTTCCTCTCCATCATTTTAGCAC 27 10892658 0.953747423 9 24 219 0.9 0.954242509 0.166666667 0.074074074 0.166666667 27 1 2 27 2R:10892617-10892678 6 CG30020 FBtr0339521|FBtr0088235 10892557|10892557 10892787|10893191 GTTCCT 6mer2-7 dme-miR-276a-3p 2R + 10892614 10892674 3'utr CG30020 FlyBase G11253.1 AGTAATCGCACAATGTACAAAGTTTGATATAGTCTAAGTACTGTTCCTCTCCATCATTTTA 21 10892658 0.987162652 9 19 163 0.942857143 1.51851394 0.028571429 0.476190476 0.685714286 21 2 0 33 2R:10892614-10892674 6 19 703 FBgn0050020 876.3433333 22.63666667 34.61333333 0.021681 0.839346193 0.548921418 -2 -2 -2 0.2 dme-miR-970-3p 6mer3-8 TCTTAT 2R 10892735 10892740 + 2R_10892735_10892740_+ 0.969245952 0.976689771 0.972967862 0.005263561 CG30020 FBtr0088235|FBtr0339521 10892557|10892557 10893191|10892787 2R + 10892698 10892750 3'utr CG30020 FlyBase G14785.1 TCTTGTTAAGTTCTAGACTAGGACATTAAACACAATCTCTTATACAAAATTAG 23 10892737 0.970543825 3 22 155 0.9375 1 0.03125 0.217391304 0.4375 23 0 2 30 2R:10892698-10892750 6 CG30020 FBtr0339521|FBtr0088235 10892557|10892557 10892787|10893191 TCTTAT 6mer3-8 dme-miR-970-3p 2R + 10892706 10892754 3'utr CG30020 FlyBase G11254.1 AGTTCTAGACTAGGACATTAAACACAATCTCTTATACAAAATTAGTTGA 19 10892737 0.685025049 5 19 129 1 1.397940009 0.04 0.210526316 0.4 19 0 0 25 2R:10892706-10892754 6 20.5 704 FBgn0050020 876.3433333 22.63666667 34.61333333 0.023392658 0.905610367 0.592257319 -2 -2 -2 0.2 dme-miR-34-5p 8mer-A1 CACTGCCA 2R 10982737 10982744 - 2R_10982737_10982744_- 0.678374519 0.678379521 0.67837702 3.54E-06 luna FBtr0333066 10977954 10983297 2R - 10982717 10982767 3'utr luna FlyBase G21935.1 TTAATAATAATTTTGTTTTCATACACTGCCAAAATGAAAATGTAAAAAAAG 35 10982747 0.792800699 7 33 279 0.952380952 1.602059991 0.214285714 0.2 0.333333333 35 2 0 40 2R:10982717-10982767 8 luna FBtr0333066 10977954 10983297 CACTGCCA 8mer-A1 dme-miR-34-5p 2R - 10982726 10982762 3'utr luna FlyBase G16633.1 AATAATTTTGTTTTCATACACTGCCAAAATGAAAATG 24 10982747 0.750660855 7 24 161 1 1.505149978 0.5 0.291666667 0.46875 24 0 0 32 2R:10982726-10982762 8 29 705 FBgn0040765 1623.386667 50.45666667 77.46666667 0.017863889 0.574750611 0.374354561 3 3 3 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2R 10982848 10982854 - 2R_10982848_10982854_- 0.671713192 0.664096103 0.667904647 0.005386103 luna FBtr0333066|FBtr0088210|FBtr0345675 10977954|10982792|10982792 10983297|10983297|10983297 2R - 10982829 10982879 3'utr luna FlyBase G21936.1 AAACAGCAAAAATTGTGTACAATTTACCAAAGCTAAGCTGATTTCTTTAAT 20 10982855 0.946450111 4 17 119 0.92 1.361727836 0.36 0.2 0.36 20 2 0 23 2R:10982829-10982879 7 luna FBtr0333066|FBtr0088210|FBtr0345675 10977954|10982792|10982792 10983297|10983297|10983297 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 10982834 10982868 3'utr luna FlyBase G16634.1 ATTGTGTACAATTTACCAAAGCTAAGCTGATTTCT 10 10982855 0.676690805 5 9 63 0.923076923 1.079181246 0.538461538 0.3 0.461538462 10 1 0 12 2R:10982834-10982868 7 14.5 706 FBgn0040765 1623.386667 50.45666667 77.46666667 0.008931945 0.287375306 0.187177281 1 1 1 0.2 dme-miR-305-3p 7mer-A1 TGTGCCA 2R 10983211 10983217 - 2R_10983211_10983217_- 0.438461618 0.495390453 0.466926035 0.040254811 luna FBtr0333066|FBtr0088210|FBtr0345675 10977954|10982792|10982792 10983297|10983297|10983297 2R - 10983196 10983232 3'utr luna FlyBase G21937.1 ATCCAGCGGAAACTGTGTGCCATCAAGGAACGATGAA 12 10983217 0.912142406 2 11 37 0.916666667 1.041392685 0.166666667 0 0 12 1 0 11 2R:10983196-10983232 7 luna FBtr0333066|FBtr0088210|FBtr0345675 10977954|10982792|10982792 10983297|10983297|10983297 TGTGCCA 7mer-A1 dme-miR-305-3p 2R - 10983187 10983232 3'utr luna FlyBase G16636.1 ATCCAGCGGAAACTGTGTGCCATCAAGGAACGATGAAAAACTTGCG 8 10983217 0.882338161 4 7 19 0.9 0.954242509 0.5 0.125 0.3 8 1 0 9 2R:10983187-10983232 7 7.5 707 FBgn0040765 1623.386667 50.45666667 77.46666667 0.004619971 0.148642399 0.096815835 0 0 0 0.2 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 1120763 1120769 + 2R_1120763_1120769_+ 0.80747765 0.808522175 0.807999913 0.000738573 rl FBtr0329920|FBtr0113700|FBtr0113702|FBtr0329919|FBtr0113703 1120749|1120749|1120749|1120749|1120749 1125927|1121107|1121107|1121771|1121107 2R + 1120739 1120786 stop_codon rl FlyBase G12499.1 AATGCGCCTTAAGAATGCGCTGTAAGCTTTAAGAATTTGAGTATATAG 13 1120761 0.984171241 3 10 85 0.888888889 1.204119983 0.222222222 0.230769231 0.444444444 13 2 0 16 2R:1120739-1120786 7 rl FBtr0113702|FBtr0329919|FBtr0329920|FBtr0113700|FBtr0113703 1120749|1120749|1120749|1120749|1120749 1121107|1121771|1125927|1121107|1121107 AGCTTTA 7mer-A1 dme-miR-79-3p 2R + 1120749 1120773 stop_codon rl FlyBase G9573.1 AAGAATGCGCTGTAAGCTTTAAGAA 6 1120761 0.714694217 2 6 30 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2R:1120749-1120773 7 9 708 FBgn0003256 2023.603333 112.5466667 172.76 0.004447512 0.079966829 0.052095392 2 2 2 0.2 dme-miR-11-3p 7mer-m1 TGTGATG 2R 1120957 1120963 + 2R_1120957_1120963_+ 0.60322517 0.606340679 0.604782925 0.002202991 rl FBtr0329920|FBtr0113700|FBtr0113702|FBtr0329919|FBtr0113703 1120749|1120749|1120749|1120749|1120749 1125927|1121107|1121107|1121771|1121107 2R + 1120938 1120971 3'utr rl FlyBase G12500.1 GATAGGAACTTAAACTATGTGTGATGTTCGTAAA 8 1120955 0.741348628 2 7 67 0.888888889 0.903089987 0.111111111 0.125 0.222222222 8 1 0 8 2R:1120938-1120971 7 rl FBtr0113702|FBtr0329919|FBtr0329920|FBtr0113700|FBtr0113703 1120749|1120749|1120749|1120749|1120749 1121107|1121771|1125927|1121107|1121107 TGTGATG 7mer-m1 dme-miR-11-3p 2R + 1120936 1120968 3'utr rl FlyBase G9575.1 AAGATAGGAACTTAAACTATGTGTGATGTTCGT 6 1120955 0.936099245 2 6 48 1 1.041392685 0.363636364 0.5 0.727272727 6 0 0 11 2R:1120936-1120968 7 7 709 FBgn0003256 2023.603333 112.5466667 172.76 0.003459176 0.062196422 0.040518639 2 2 2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 11216752 11216757 + 2R_11216752_11216757_+ 0.71060422 0.716205837 0.713405028 0.003960929 shn FBtr0330620|FBtr0330620|FBtr0330620|FBtr0330619|FBtr0330619|FBtr0330619|FBtr0088100|FBtr0088100|FBtr0088100|FBtr0088099|FBtr0088099|FBtr0088099|FBtr0088098|FBtr0088098|FBtr0088098|FBtr0088101|FBtr0088101|FBtr0088101 11216243|11216243|11216243|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213 11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394 2R + 11216657 11216779 3'utr shn FlyBase G14854.2 GCCAACCAACGAGCACACTTATAAATCTATCTATATTGTATACACTTAACCATAATTTGTTTTCGAAATGCATAAATGCAAAAACTCCTGAAGTGCTGTGAGTCTATCTACAAATGTAAAGAT 118 11216750 0.783147818 17 101 729 0.874074074 1.469822016 0.125925926 0.13559322 0.244444444 118 14 3 118 2R:11216657-11216779 6 shn FBtr0088098|FBtr0088098|FBtr0088098|FBtr0088101|FBtr0088101|FBtr0088101|FBtr0088100|FBtr0088100|FBtr0088100|FBtr0088099|FBtr0088099|FBtr0088099|FBtr0330620|FBtr0330620|FBtr0330620|FBtr0330619|FBtr0330619|FBtr0330619 11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216243|11216243|11216243|11216213|11216213|11216213 11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 11216665 11216846 3'utr shn FlyBase G11299.2 ACGAGCACACTTATAAATCTATCTATATTGTATACACTTAACCATAATTTGTTTTCGAAATGCATAAATGCAAAAACTCCTGAAGTGCTGTGAGTCTATCTACAAATGTAAAGATCCGAGAGCGAGAGAAGTGTGTTATTTTTAAGGCCTAGCCCCGAAAATGAACCTCCAAACCGAACCAG 98 11216748 0.97152353 23 90 618 0.921052632 1.447158031 0.125 0.387755102 0.605263158 98 8 4 140 2R:11216665-11216846 6 72.5 710 FBgn0003396 1305.2 16.31666667 25.01 0.055547043 4.443309499 2.898840464 2 4 3 0.2 dme-miR-305-5p 7mer-A1 GTACAAA 2R 11217197 11217203 + 2R_11217197_11217203_+ 0.673163716 0.680776518 0.676970117 0.005383063 shn FBtr0330620|FBtr0330619|FBtr0088100|FBtr0088099|FBtr0088098|FBtr0088101 11216243|11216213|11216213|11216213|11216213|11216213 11217394|11217394|11217394|11217394|11217394|11217394 2R + 11217054 11217259 3'utr shn FlyBase G14858.1 TTTTAATTTTGTATTTGACAGAAGAGAAACGAAATGATGAAAAAAAACGCTAACTGTAAATAATCAATATGTTGTCATATATGCATTAAGCGGTAGGTTAGATAAACAAACTACACAAAGTTGATAGATATAAATGAAATATTGTACAAACTGCTATGGCAAGCGCTGCAGCAAAATCTATATATACACATAGATATATATCTATA 581 11217195 0.993823186 28 548 3732 0.944211994 1.985490629 0.337517434 0.179001721 0.334728033 581 34 6 677 2R:11217054-11217259 7 shn FBtr0088098|FBtr0088101|FBtr0088100|FBtr0088099|FBtr0330620|FBtr0330619 11216213|11216213|11216213|11216213|11216243|11216213 11217394|11217394|11217394|11217394|11217394|11217394 GTACAAA 7mer-A1 dme-miR-305-5p 2R + 11217161 11217227 3'utr shn FlyBase G11304.2 AAACTACACAAAGTTGATAGATATAAATGAAATATTGTACAAACTGCTATGGCAAGCGCTGCAGCAA 353 11217195 0.714874836 12 345 2208 0.984703633 2.012837225 0.363288719 0.35694051 0.565965583 353 4 4 515 2R:11217161-11217227 7 432 711 FBgn0003396 1305.2 16.31666667 25.01 0.330983757 26.47599591 17.27309076 2 2 2 0.2 dme-bantam-3p 6mer3-8 TGATCT 2R 11217302 11217307 + 2R_11217302_11217307_+ 0.999996454 0.999946169 0.999971311 3.56E-05 shn FBtr0330620|FBtr0330619|FBtr0088100|FBtr0088099|FBtr0088098|FBtr0088101 11216243|11216213|11216213|11216213|11216213|11216213 11217394|11217394|11217394|11217394|11217394|11217394 2R + 11217279 11217329 3'utr shn FlyBase G14859.1 GGTTAAACAACAAGAAAATGAAGTGATCTATTACATTATTGTAAAATATAT 123 11217307 0.973741087 8 122 748 0.987096774 2.184691431 0.006451613 0.203252033 0.367741935 123 2 0 153 2R:11217279-11217329 6 shn FBtr0088098|FBtr0088101|FBtr0088100|FBtr0088099|FBtr0330620|FBtr0330619 11216213|11216213|11216213|11216213|11216243|11216213 11217394|11217394|11217394|11217394|11217394|11217394 TGATCT 6mer3-8 dme-bantam-3p 2R + 11217277 11217332 3'utr shn FlyBase G11305.1 GTGGTTAAACAACAAGAAAATGAAGTGATCTATTACATTATTGTAAAATATATCAA 99 11217297 0.978344205 10 94 629 0.96350365 1.643452676 0.04379562 0.313131313 0.503649635 99 3 2 132 2R:11217277-11217332 6 110.5 712 FBgn0003396 1305.2 16.31666667 25.01 0.084661355 6.772216547 4.418232707 -5 5 0 0.2 dme-miR-1008-3p 7mer-m8 AGCTGTG 2R 11226371 11226377 + 2R_11226371_11226377_+ 0.566825549 0.669298075 0.618061812 0.07245907 CG7737 FBtr0339479|FBtr0088105 11226115|11226115 11226746|11226746 2R + 11226344 11226392 3'utr CG7737 FlyBase G14869.1 TATGTCAACAAGTGCGCTGCCCAATAAAGCTGTGTTTAAGTCTTCTCTA 12 11226368 0.93717209 3 12 59 1 1.113943352 0.230769231 0.083333333 0.153846154 12 0 0 13 2R:11226344-11226392 7 CG7737 FBtr0339479|FBtr0088105 11226115|11226115 11226746|11226746 AGCTGTG 7mer-m8 dme-miR-1008-3p 2R + 11226338 11226390 3'utr CG7737 FlyBase G11312.1 TGTCAATATGTCAACAAGTGCGCTGCCCAATAAAGCTGTGTTTAAGTCTTCTC 13 11226368 0.779713142 5 11 63 0.954545455 1.322219295 0.227272727 0.538461538 0.727272727 13 1 0 21 2R:11226338-11226390 7 8 713 FBgn0033584 242.6633333 12.57333333 19.08 0.032967486 0.636267232 0.419287212 3 3 3 0.2 dme-miR-11-3p 7mer-m1 TGTGATG 2R 1125300 1125306 + 2R_1125300_1125306_+ 0.61022145 0.611823936 0.611022693 0.001133068 rl FBtr0329920|FBtr0345337 1120749|1125087 1125927|1125927 2R + 1125279 1125323 3'utr rl FlyBase G12503.1 AAGATAGGAACTTAAACTATGTGTGATGTTCGTAAAATGCAAAAC 12 1125298 0.689931011 3 12 94 1 1.146128036 0.357142857 0.166666667 0.285714286 12 0 0 14 2R:1125279-1125323 7 rl FBtr0329920|FBtr0345337 1120749|1125087 1125927|1125927 TGTGATG 7mer-m1 dme-miR-11-3p 2R + 1125279 1125322 3'utr rl FlyBase G9578.1 AAGATAGGAACTTAAACTATGTGTGATGTTCGTAAAATGCAAAA 9 1125298 0.90930168 4 9 78 1 1.146128036 0.357142857 0.444444444 0.642857143 9 0 0 14 2R:1125279-1125322 7 10.5 714 FBgn0003256 2023.603333 112.5466667 172.76 0.005188764 0.093294633 0.060777958 2 2 2 0.2 dme-miR-33-5p 8mer-A1 CAATGCAA 2R 11280594 11280601 - 2R_11280594_11280601_- 0.616525694 0.606563952 0.611544823 0.007043986 CG9062 FBtr0088181|FBtr0332422 11280482|11280482 11281265|11281106 2R - 11280579 11280650 3'utr CG9062 FlyBase G21953.1 ACATAGAACATACATAGGTATAAGAAATCTGTTAAATATACAGAAAAATCAATGCAATGGTAGTAGCCCAAC 60 11280602 0.944405863 4 58 255 0.985507246 1.832508913 0.057971014 0.133333333 0.246376812 60 1 0 68 2R:11280579-11280650 8 CG9062 FBtr0088181|FBtr0332422 11280482|11280482 11281265|11281106 CAATGCAA 8mer-A1 dme-miR-33-5p 2R - 11280552 11280626 3'utr CG9062 FlyBase G16646.1 AAATCTGTTAAATATACAGAAAAATCAATGCAATGGTAGTAGCCCAACTTGTAAAGAGCTCTATGCAAGCCAATT 50 11280602 0.945504715 6 48 201 0.95890411 1.84509804 0.054794521 0.32 0.534246575 50 3 0 70 2R:11280552-11280626 8 52 715 FBgn0033607 376.12 15.09333333 23.24 0.138253749 3.445229682 2.237521515 1 1 1 0.2 dme-miR-252-5p 6mer3-8 GTACTT 2R 11280832 11280837 - 2R_11280832_11280837_- 0.999991462 0.999998356 0.999994909 4.88E-06 CG9062 FBtr0088181|FBtr0332422 11280482|11280482 11281265|11281106 2R - 11280690 11280854 3'utr CG9062 FlyBase G21954.1 TCGTTAGGAATAAATATGTACTTCAGATTCAGACTTATAACAATTAGGCTTGCGACACACGTAGATAAGCATTGCAAAGGAGTAACTGCAGACATACCATTAAATCGTATTTGCATCTGAAGCAACTAGACCTAGAGTATTGCGCATATATGTATGTATGTAATA 26 11280838 0.976936123 13 24 165 0.96875 1.190331698 0.1875 0.153846154 0.3125 26 0 1 31 2R:11280690-11280854 6 CG9062 FBtr0088181|FBtr0332422 11280482|11280482 11281265|11281106 GTACTT 6mer3-8 dme-miR-252-5p 2R - 11280798 11280873 3'utr CG9062 FlyBase G16647.1 ACTTTTGTTTGTTCACTTCTCGTTAGGAATAAATATGTACTTCAGATTCAGACTTATAACAATTAGGCTTGCGACA 12 11280827 0.799257652 8 11 92 0.941176471 0.903089987 0.058823529 0.333333333 0.529411765 12 0 1 16 2R:11280798-11280873 6 8.5 716 FBgn0033607 376.12 15.09333333 23.24 0.02259917 0.563162544 0.365748709 1 -10 -4.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2R 11309690 11309696 + 2R_11309690_11309696_+ 0.67767939 0.649031301 0.663355346 0.020257266 CG7745 FBtr0088119 11309524 11309829 2R + 11309671 11309717 3'utr CG7745 FlyBase G14891.1 CGAACACTTTTCAAATGTGCTAGTCAAGACCAGCAATTGGGATTCCA 18 11309687 0.971601645 3 18 108 1 1.322219295 0.238095238 0.166666667 0.285714286 18 0 0 21 2R:11309671-11309717 7 CG7745 FBtr0088119 11309524 11309829 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R + 11309644 11309704 3'utr CG7745 FlyBase G11325.1 AGTCATTTGCAAAGCTCTACGTTCTACCGAACACTTTTCAAATGTGCTAGTCAAGACCAGC 10 11309687 0.9763679 4 10 66 1 1.146128036 0.214285714 0.3 0.5 10 0 0 14 2R:11309644-11309704 7 13.5 717 FBgn0033616 171.0033333 10.95666667 16.76333333 0.07894583 1.232126559 0.805329091 3 3 3 0.2 dme-miR-282-5p 6mer3-8 AGAGGC 2R 11462912 11462917 + 2R_11462912_11462917_+ 0.841186773 0.71939452 0.780290646 0.086120161 E(Pc) FBtr0330622|FBtr0330621|FBtr0088140|FBtr0088139|FBtr0330623 11461842|11461812|11461812|11461812|11461842 11464030|11465270|11464030|11464030|11465270 2R + 11462898 11462933 3'utr E(Pc) FlyBase G14939.1 AGGAATGGAACTTCAGAGGCAACTGATCTGAGAGAG 5 11462923 0.866889009 3 5 16 1 0.77815125 0.833333333 0.2 0.333333333 5 0 0 6 2R:11462898-11462933 6 E(Pc) FBtr0330623|FBtr0088139|FBtr0088140|FBtr0330621|FBtr0330622 11461842|11461812|11461812|11461812|11461842 11465270|11464030|11464030|11465270|11464030 AGAGGC 6mer3-8 dme-miR-282-5p 2R + 11462890 11462965 3'utr E(Pc) FlyBase G11353.1 TTTAACTAAGGAATGGAACTTCAGAGGCAACTGATCTGAGAGAGATGTAGGGAGTTGCAGAAGAAAACTACTATTG 15 11462924 0.973128488 7 10 64 0.833333333 1 0.291666667 0.466666667 0.666666667 15 3 1 20 2R:11462890-11462965 6 7 718 FBgn0000581 1705.15 21.49666667 32.99 0.004105211 0.325631881 0.212185511 -11 -12 -11.5 0.2 dme-miR-252-5p 7mer-m8 GTACTTA 2R 11579041 11579047 - 2R_11579041_11579047_- 0.587041297 0.587326863 0.58718408 0.00020195 tou FBtr0333070|FBtr0113066|FBtr0088091|FBtr0333071 11577483|11578878|11578878|11578878 11579826|11579826|11579826|11579826 2R - 11578989 11579093 3'utr tou FlyBase G22043.1 TTTTAAGCACCAACGAAGCGCTCATTTAAGTTTTAAAGTGTATTTTGTACTTATAGCAACTCCGAAATCTGTATTTAAACGTATTATAACAAGTGCTAACAGTTG 46 11579048 0.98838123 10 42 389 0.918032787 1.447158031 0.131147541 0.260869565 0.442622951 46 4 1 56 2R:11578989-11579093 7 tou FBtr0333071|FBtr0113066|FBtr0088091|FBtr0333070 11578878|11578878|11578878|11577483 11579826|11579826|11579826|11579826 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 11578901 11579281 3'utr tou FlyBase G16721.1 AAGAAGCCATCTACAGTAGACGCCCGGACTGGATGAACGCTGACAAATGACAAATGAACACGTACAAAAACTGTCTACCAATTTCCGATCCGATCGATCGATCCATCGTTTGAACAGTATTTTGTGCACAAAGCCGCGTCGCTTTATTTTCTACACTTACAATTCGAACCCTAATTTTAACAACTATTTTTTAAGCACCAACGAAGCGCTCATTTAAGTTTTAAAGTGTATTTTGTACTTATAGCAACTCCGAAATCTGTATTTAAACGTATTATAACAAGTGCTAACAGTTGCCCAGGCAAAAATGCGAACAATTATACTCAAAAAGGCGGTGCGAGGAGGACTTGTAAATGTAAATGAAAGCAAATTAAAATTAAATGT 124 11579048 0.977775772 39 120 793 0.971590909 2.23299611 0.181818182 0.298387097 0.505681818 124 5 0 171 2R:11578901-11579281 7 24 719 FBgn0033636 2664.063333 30.46 46.92333333 0.009008795 0.787918582 0.511472615 1 1 1 0.2 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 2R 11619646 11619652 - 2R_11619646_11619652_- 0.821775399 0.821789327 0.821782363 9.83E-06 CG9005 FBtr0300945 11619477 11620844 2R - 11619612 11619665 3'utr CG9005 FlyBase G22107.1 ATTTTCCAATTGATACCTGACTATAACTATTGTATAACAACGTACTACACAGCT 12 11619656 0.989233326 7 10 97 0.857142857 1.079181246 0.071428571 0.166666667 0.285714286 12 2 0 12 2R:11619612-11619665 7 CG9005 FBtr0300945 11619477 11620844 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2R - 11619614 11619665 3'utr CG9005 FlyBase G16756.1 ATTTTCCAATTGATACCTGACTATAACTATTGTATAACAACGTACTACACAG 7 11619655 0.99192614 5 5 46 0.714285714 0.698970004 0.142857143 0 0 7 2 0 5 2R:11619614-11619665 7 7.5 720 FBgn0033638 313.34 6.546666667 10.11333333 0.023935661 1.145621181 0.741595254 4 3 3.5 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 2R 11642877 11642883 - 2R_11642877_11642883_- 0.518771902 0.519867354 0.519319628 0.000774635 CG9003 FBtr0330632|FBtr0330634|FBtr0113069|FBtr0113068|FBtr0330633|FBtr0088088|FBtr0113067 11642266|11641475|11642266|11642266|11642266|11642266|11641475 11643134|11643188|11643188|11643188|11643134|11643188|11643188 2R - 11642747 11642910 3'utr CG9003 FlyBase G22136.1 AAAAACTCGCAGAAACCAGCATCAAATTGTGATTATTTTATTTACTATGCTACGTTATCTAGACCCTCACTTGTGTAAACTGTATTAGCGCCCACACTCTGTTTGTTATTAACTGCAGCCCGATGAATTGCTAGCTTATATAGATCTGTATATATACATATATG 302 11642884 0.862518302 25 293 2501 0.962962963 1.812913357 0.054320988 0.268211921 0.454320988 302 10 5 390 2R:11642747-11642910 7 CG9003 FBtr0088088|FBtr0113067|FBtr0113068|FBtr0330633|FBtr0113069|FBtr0330632|FBtr0330634 11642266|11641475|11642266|11642266|11642266|11642266|11641475 11643188|11643188|11643188|11643134|11643188|11643134|11643188 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 11642864 11642911 3'utr CG9003 FlyBase G16782.1 CAAAAACTCGCAGAAACCAGCATCAAATTGTGATTATTTTATTTACTA 173 11642884 0.987401994 10 162 1437 0.9437751 1.525969822 0.048192771 0.312138728 0.522088353 173 8 6 235 2R:11642864-11642911 7 220 721 FBgn0033639 532.1833333 18.93 29.13 0.413391375 11.6217644 7.552351528 1 1 1 0.2 dme-miR-305-5p 7mer-A1 GTACAAA 2R 11688610 11688616 - 2R_11688610_11688616_- 0.7811351 0.77341762 0.77727636 0.005457097 wal FBtr0088083 11688567 11689078 2R - 11688604 11688636 3'utr wal FlyBase G22155.1 TGTGAAAATGTGAAAACTGTGTACAAAAAAAGA 7 11688619 0.877184095 5 7 27 1 1 0.7 0.285714286 0.5 7 0 0 10 2R:11688604-11688636 7 wal FBtr0088083 11688567 11689078 GTACAAA 7mer-A1 dme-miR-305-5p 2R - 11688591 11688638 3'utr wal FlyBase G16798.1 AGTGTGAAAATGTGAAAACTGTGTACAAAAAAAGATTATAGATCAAAT 8 11688619 0.912093297 3 8 31 1 1.079181246 0.583333333 0.375 0.583333333 8 0 0 12 2R:11688591-11688638 7 6.5 722 FBgn0010516 627.3333333 62.66 95.9 0.010361318 0.10373444 0.067778936 3 3 3 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 11689014 11689021 - 2R_11689014_11689021_- 0.612880216 0.617258592 0.615069404 0.003095996 wal FBtr0088083 11688567 11689078 2R - 11688990 11689087 stop_codon wal FlyBase G22158.1 AAGTTGTAAGGCGAGATTGTCACTTGCTGTAGTATAAAGATTGTGTACCGATGAATTGATAACTGTTGCATTTATTTGAATTTTGACATAAGTCCGTG 349 11689022 0.989842041 22 338 3491 0.966292135 1.934498451 0.359550562 0.212034384 0.382022472 349 11 4 430 2R:11688990-11689087 8 wal FBtr0088083|FBtr0088082 11688567|11688934 11689078|11689078 TGCATTTA 8mer-A1 dme-miR-277-3p 2R - 11688971 11689087 stop_codon wal FlyBase G16801.1 AAGTTGTAAGGCGAGATTGTCACTTGCTGTAGTATAAAGATTGTGTACCGATGAATTGATAACTGTTGCATTTATTTGAATTTTGACATAAGTCCGTGGAAGATTTTCCCTTAAATT 254 11689022 0.991362397 22 243 2604 0.960106383 1.858537198 0.29787234 0.374015748 0.57712766 254 11 4 361 2R:11688971-11689087 8 275 723 FBgn0010516 627.3333333 62.66 95.9 0.438363443 4.388764762 2.867570386 1 1 1 0.2 dme-miR-980-3p 7mer-A1 GCAGCTA 2R 11826991 11826997 + 2R_11826991_11826997_+ 0.666698362 0.693573275 0.680135819 0.019003424 CG13192 FBtr0088031 11826796 11827097 2R + 11826972 11827037 3'utr CG13192 FlyBase G14964.1 AATTAAAGGGCTTGGCAATGCAGCTATTTGTTACTTAGATGAACTTTGACCACCCTTGAAAAAGAA 32 11826990 0.835183514 10 28 216 0.888888889 1.204119983 0.25 0.09375 0.194444444 32 3 1 32 2R:11826972-11827037 7 CG13192 FBtr0088031 11826796 11827097 GCAGCTA 7mer-A1 dme-miR-980-3p 2R + 11826976 11827029 3'utr CG13192 FlyBase G11369.1 AAAGGGCTTGGCAATGCAGCTATTTGTTACTTAGATGAACTTTGACCACCCTTG 16 11826990 0.835828957 7 15 104 0.884615385 0.759667845 0.461538462 0.5 0.692307692 16 0 3 23 2R:11826976-11827029 7 18 724 FBgn0033653 156.6666667 14.10333333 21.37666667 0.114893617 1.27629402 0.842039607 1 1 1 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 11901057 11901064 + 2R_11901057_11901064_+ 0.486479161 0.490737852 0.488608507 0.003011356 Zip48C FBtr0088038 11900986 11901394 2R + 11901028 11901122 3'utr Zip48C FlyBase G15003.1 AATCTAGTGCTAAACTCAAAGATTCCACTGTACTTAACGCAAAACTCTGCTGTCTTGTAAATAGAAGCATGCTGTGTACAAATCTCAGAACCAGC 26 11901056 0.975057564 6 22 139 0.848484848 0.84509804 0.03030303 0.230769231 0.393939394 26 2 3 28 2R:11901028-11901122 8 Zip48C FBtr0088038 11900986 11901394 GTACTTAA 8mer-A1 dme-miR-252-5p 2R + 11901031 11901083 3'utr Zip48C FlyBase G11397.1 CTAGTGCTAAACTCAAAGATTCCACTGTACTTAACGCAAAACTCTGCTGTCTT 22 11901056 0.929426898 2 22 135 1 1.477121255 0.033333333 0.272727273 0.466666667 22 0 0 30 2R:11901031-11901083 8 21 725 FBgn0033665 71.33333333 4.603333333 6.97 0.294392523 4.561911658 3.012912482 1 1 1 0.2 dme-miR-1003-3p 6mer3-8 ATGTGA 2R 11901300 11901305 + 2R_11901300_11901305_+ 0.807094856 0.794337462 0.800716159 0.009020844 Zip48C FBtr0088038 11900986 11901394 2R + 11901287 11901322 3'utr Zip48C FlyBase G15004.1 TAAACAAACGTGCATGTGAATTAGGTTTTAAGTTGT 28 11901307 0.800114717 4 26 232 0.942857143 1.51851394 0.314285714 0.214285714 0.371428571 28 2 0 33 2R:11901287-11901322 6 Zip48C FBtr0088038 11900986 11901394 ATGTGA 6mer3-8 dme-miR-1003-3p 2R + 11901284 11901321 3'utr Zip48C FlyBase G11399.1 TTGTAAACAAACGTGCATGTGAATTAGGTTTTAAGTTG 8 11901307 0.9728619 4 8 58 1 1.176091259 0.133333333 0.625 0.8 8 0 0 15 2R:11901284-11901321 6 17.5 726 FBgn0033665 71.33333333 4.603333333 6.97 0.245327103 3.801593049 2.510760402 -7 -7 -7 0.2 dme-bantam-3p 6mer3-8 TGATCT 2R 11977211 11977216 + 2R_11977211_11977216_+ 0.998055531 0.999615585 0.998835558 0.001103157 ADD1 FBtr0088042 11977075 11977721 2R + 11977191 11977234 3'utr ADD1 FlyBase G15024.1 AACATTTTATGTAAATACTTTGATCTGTTTATAGTTTAAACAAT 15 11977210 0.641064807 7 13 167 0.9375 1.176091259 0.0625 0.066666667 0.125 15 1 0 15 2R:11977191-11977234 6 ADD1 FBtr0088042 11977075 11977721 TGATCT 6mer3-8 dme-bantam-3p 2R + 11977199 11977234 3'utr ADD1 FlyBase G11414.1 ATGTAAATACTTTGATCTGTTTATAGTTTAAACAAT 17 11977210 0.712294705 6 16 184 0.931034483 1.431363764 0 0.529411765 0.724137931 17 2 0 27 2R:11977199-11977234 6 15 727 FBgn0026573 1224.666667 33.41666667 51.42333333 0.012248231 0.448877805 0.291696376 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 11977302 11977307 + 2R_11977302_11977307_+ 0.998387047 0.998580131 0.998483589 0.000136542 ADD1 FBtr0088042|FBtr0088042|FBtr0088042 11977075|11977075|11977075 11977721|11977721|11977721 2R + 11977265 11977324 3'utr ADD1 FlyBase G15025.1 GACATTAACACCATTATATTAACTGAATCGCGTATTCCTGTGAATATAAGTCGGGCACGT 28 11977299 0.983292618 9 27 202 0.941176471 1.505149978 0.088235294 0.178571429 0.323529412 28 2 0 32 2R:11977265-11977324 6 ADD1 FBtr0088042|FBtr0088042|FBtr0088042 11977075|11977075|11977075 11977721|11977721|11977721 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 11977284 11977323 3'utr ADD1 FlyBase G11415.1 TAACTGAATCGCGTATTCCTGTGAATATAAGTCGGGCACG 25 11977299 0.699335887 7 23 184 0.95 1.579783597 0.2 0.48 0.675 25 2 0 38 2R:11977284-11977323 6 26 728 FBgn0026573 1224.666667 33.41666667 51.42333333 0.021230267 0.778054863 0.505607053 3 3 3 0.2 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2R 11991313 11991320 + 2R_11991313_11991320_+ 0.631118415 0.631119933 0.631119174 1.06E-06 CG8298 FBtr0306003 11991281 11992350 2R + 11991105 11991372 stop_codon CG8298 FlyBase G15033.1 GAAATGCCTGCACTGGAACAACTACGAGACGTACGAGGCTGATATTGAGCTGTTTGCTCAGCGAGAACTTGATCCCAATTTACCTGTAAGGCGTTCCGTACCGGGCAGTATATTCCTGACCACTTCTTTTGCGATGATTATCCTGGCTAACTACTTAAAGTCCAATCCCCTGAAATAGTGGCTGATGTAGGGAAGAACGGCTGCTCTATCTAGTCAACCAAACACGTTCAAATGTGTGCATTAAAATTTATTGTTTAGTTTAGCATAT 178 11991312 0.976302187 34 169 1094 0.941176471 1.806179974 0.132352941 0.106741573 0.220588235 178 10 2 192 2R:11991105-11991372 8 CG8298 FBtr0306003 11991281 11992350 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R + 11991126 11991364 stop_codon CG8298 FlyBase G11420.1 CTACGAGACGTACGAGGCTGATATTGAGCTGTTTGCTCAGCGAGAACTTGATCCCAATTTACCTGTAAGGCGTTCCGTACCGGGCAGTATATTCCTGACCACTTCTTTTGCGATGATTATCCTGGCTAACTACTTAAAGTCCAATCCCCTGAAATAGTGGCTGATGTAGGGAAGAACGGCTGCTCTATCTAGTCAACCAAACACGTTCAAATGTGTGCATTAAAATTTATTGTTTAGTT 126 11991312 0.750569599 34 117 779 0.948598131 2.006466042 0.130841121 0.436507937 0.668224299 126 10 1 203 2R:11991126-11991364 8 48 729 FBgn0033673 177.0033333 9.53 14.54 0.271181334 5.036726128 3.301237964 1 1 1 0.2 dme-miR-14-3p 7mer-A1 AGACTGA 2R 12049766 12049772 + 2R_12049766_12049772_+ 0.821217447 0.821429466 0.821323456 0.000149977 Drep-1 FBtr0330629|FBtr0087978 12049191|12049164 12050172|12050172 2R + 12049691 12049788 3'utr Drep-1 FlyBase G15086.1 GTAGAGTGGAAACGCACATCAAATATTGTTTTTAGACCAATGCCATTGTGAATGTCATTCGTTAAAGGCCAATTGAGACTGACTGAATTTATGTGTAA 137 12049764 0.942985892 7 134 550 0.965517241 2.225309282 0.373563218 0.233576642 0.396551724 137 6 0 168 2R:12049691-12049788 7 Drep-1 FBtr0330629|FBtr0087978 12049191|12049164 12050172|12050172 AGACTGA 7mer-A1 dme-miR-14-3p 2R + 12049743 12049790 3'utr Drep-1 FlyBase G11459.1 TGTCATTCGTTAAAGGCCAATTGAGACTGACTGAATTTATGTGTAATA 98 12049764 0.754699072 4 96 372 0.962264151 1.582631439 0.352201258 0.428571429 0.647798742 98 3 3 153 2R:12049743-12049790 7 116 730 FBgn0024732 75.66666667 4.37 6.78 1.533039648 26.54462243 17.10914454 2 2 2 0.2 dme-miR-12-5p 6mer2-7 ATACTC 2R 12146152 12146157 - 2R_12146152_12146157_- 0.993466658 0.987134632 0.990300645 0.004477471 CG8878 FBtr0088018|FBtr0088017 12146022|12146022 12146701|12146701 2R - 12146123 12146237 3'utr CG8878 FlyBase G22272.1 TAGTTTCGTTAGGCTATCAACAACCATATTATAGACCACATGTACGACTCGTTTCACCCACATTTCATGCAGCCAGGTACATACTCTCCTCAAAAAGTATTTAATATAACTAGAT 24 12146156 0.792361975 10 23 145 1 1.447158031 0.142857143 0.166666667 0.285714286 24 0 0 28 2R:12146123-12146237 6 CG8878 FBtr0088018|FBtr0088017 12146022|12146022 12146701|12146701 ATACTC 6mer2-7 dme-miR-12-5p 2R - 12146112 12146207 3'utr CG8878 FlyBase G16887.1 ATAGACCACATGTACGACTCGTTTCACCCACATTTCATGCAGCCAGGTACATACTCTCCTCAAAAAGTATTTAATATAACTAGATAATGGTTATTT 16 12146156 0.978456746 7 14 89 0.916666667 1.041392685 0.083333333 0.375 0.583333333 16 1 1 22 2R:12146112-12146207 6 9 731 FBgn0027504 1146.95 34.64 53.11333333 0.007846898 0.259815242 0.169448977 -1 -1 -1 0.2 dme-miR-8-3p 6mer2-7 AGTATT 2R 12166876 12166881 - 2R_12166876_12166881_- 0.999999998 0.590563237 0.795281618 0.289515538 Oda FBtr0088015|FBtr0088013 12166293|12166574 12167397|12167397 2R - 12166790 12166906 3'utr Oda FlyBase G22343.1 ATTTTATGTTTAAGCTTATATATGAAGTATTGTAATCCCAATTTGTTCGCACTTAAAAATATTCAATATATTTTTATTCACTTTTTGTACGCCGAAAGCGACGAGAACGGCGAGGTA 13 12166884 0.989741016 8 12 119 0.933333333 1.146128036 0.066666667 0.153846154 0.266666667 13 1 0 14 2R:12166790-12166906 6 Oda FBtr0088015|FBtr0088013 12166293|12166574 12167397|12167397 AGTATT 6mer2-7 dme-miR-8-3p 2R - 12166829 12166894 3'utr Oda FlyBase G16950.1 AGCTTATATATGAAGTATTGTAATCCCAATTTGTTCGCACTTAAAAATATTCAATATATTTTTATT 6 12166876 0.993762778 4 6 62 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2R:12166829-12166894 6 5.5 732 FBgn0014184 5981.923333 429.3966667 665.3566667 0.000919437 0.01280867 0.008266243 3 -5 -1 0.2 dme-miR-7-5p 6mer3-8 GTCTTC 2R 12167170 12167175 - 2R_12167170_12167175_- 0.992425794 0.959553136 0.975989465 0.023244509 Oda FBtr0088015|FBtr0088013|FBtr0088014 12166293|12166574|12167027 12167397|12167397|12167397 2R - 12167064 12167225 5'utr Oda FlyBase G22345.1 CTTTTTGAATCTTCGCGTTGTTTATGTAGTCGAAAATCGTTTTGAAAATTGTCTTCGGAGCGGCTTCATTTTTGGTAGACTTTCAATTATGGCCAGCCACGTTAAGAGCCTGATCGCAAATTACTATATTAAACTATATCCAACAACAACAAAAATCGAACG 37 12167176 0.979509746 17 37 271 1 1.643452676 0.045454545 0.189189189 0.318181818 37 0 0 44 2R:12167064-12167225 6 Oda FBtr0088014|FBtr0088015|FBtr0088013 12167027|12166293|12166574 12167397|12167397|12167397 GTCTTC 6mer3-8 dme-miR-7-5p 2R - 12167058 12167186 5'utr Oda FlyBase G16952.1 TTTTGAAAATTGTCTTCGGAGCGGCTTCATTTTTGGTAGACTTTCAATTATGGCCAGCCACGTTAAGAGCCTGATCGCAAATTACTATATTAAACTATATCCAACAACAACAAAAATCGAACGAAAACG 35 12167177 0.985440326 12 27 223 0.87037037 1.194976603 0.074074074 0.382352941 0.611111111 34 5 2 47 2R:12167058-12167186 6 14 733 FBgn0014184 5981.923333 429.3966667 665.3566667 0.002340384 0.032603886 0.021041346 1 2 1.5 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2R 12177463 12177469 - 2R_12177463_12177469_- 0.822837918 0.823344665 0.823091291 0.000358362 EndoG FBtr0088012 12177428 12177540 2R - 12177449 12177483 3'utr EndoG FlyBase G22363.1 AATTTTCTTCTTTTCCAAAGAACTTGTGGATTAAT 6 12177471 0.892011484 2 6 69 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2R:12177449-12177483 7 EndoG FBtr0088012 12177428 12177540 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 12177449 12177482 3'utr EndoG FlyBase G16968.1 ATTTTCTTCTTTTCCAAAGAACTTGTGGATTAAT 5 12177472 0.747228632 2 5 60 1 0.698970004 0 0 0 5 0 0 5 2R:12177449-12177482 7 5.5 734 FBgn0033690 109.39 12.2 18.82333333 0.050278819 0.450819672 0.292190544 2 3 2.5 0.2 dme-miR-79-3p 8mer-A1 TAGCTTTA 2R 12182209 12182216 + 2R_12182209_12182216_+ 0.625066297 0.625356244 0.625211271 0.00020499 wash FBtr0339595|FBtr0087989 12182199|12182199 12182373|12182373 2R + 12182165 12182254 stop_codon wash FlyBase G15122.1 GAACACTCCGAGGACGACGAGGATGGGTGGAACTAGTGAATATTTAGCTTTAGTACCGGTTTAAGTGCCTTGGCTGGCTTAAAGCACTAG 24 12182208 0.974772391 7 23 141 1 1.531478917 0.147058824 0.333333333 0.529411765 24 0 0 34 2R:12182165-12182254 8 wash FBtr0339595|FBtr0087989 12182199|12182199 12182373|12182373 TAGCTTTA 8mer-A1 dme-miR-79-3p 2R + 12182164 12182268 stop_codon wash FlyBase G11488.1 CGAACACTCCGAGGACGACGAGGATGGGTGGAACTAGTGAATATTTAGCTTTAGTACCGGTTTAAGTGCCTTGGCTGGCTTAAAGCACTAGCAACCTAGGTTCTC 16 12182208 0.985694226 10 13 114 0.923076923 1.079181246 0.038461538 0.4375 0.653846154 16 1 1 24 2R:12182164-12182268 8 10 735 FBgn0033692 122.6666667 8.66 13.35666667 0.081521739 1.154734411 0.748689793 1 1 1 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 2R 12192420 12192426 - 2R_12192420_12192426_- 0.521223851 0.521223842 0.521223847 7.07E-08 CG8858 FBtr0088008 12192372 12192572 2R - 12192373 12192439 3'utr CG8858 FlyBase G22374.1 GATAATTTTCTATTGTGATTCATTGATCCAGGAGTGTAAGGAAACCTTAAATATACTATCATAAATA 14 12192418 0.991198907 6 14 148 1 1.255272505 0.277777778 0.214285714 0.388888889 14 0 0 18 2R:12192373-12192439 7 CG8858 FBtr0088008 12192372 12192572 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 12192412 12192437 3'utr CG8858 FlyBase G16978.1 TAATTTTCTATTGTGATTCATTGATC 7 12192429 0.571277289 4 5 60 0.7 0.84509804 0.1 0.428571429 0.6 7 3 0 7 2R:12192412-12192437 7 9.5 736 FBgn0033698 597.0133333 12.17333333 18.65666667 0.015912542 0.780394304 0.509201358 -8 3 -2.5 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 12275344 12275351 + 2R_12275344_12275351_+ 0.491710998 0.472857479 0.482284238 0.013331438 Cam FBtr0304963|FBtr0304964 12273793|12273793 12278809|12276621 2R + 12275325 12275363 3'utr Cam FlyBase G15139.1 ATACATATAAATACCTAATGTACTTAATGCAACAGGAAA 34 12275343 0.741351897 4 34 205 1 1.681241237 0.041666667 0.235294118 0.458333333 34 0 0 48 2R:12275325-12275363 8 Cam FBtr0304964|FBtr0304963 12273793|12273793 12276621|12278809 GTACTTAA 8mer-A1 dme-miR-252-5p 2R + 12275305 12275366 3'utr Cam FlyBase G11498.1 AACTCTATACATATATATATATACATATAAATACCTAATGTACTTAATGCAACAGGAAAACC 23 12275343 0.975109623 2 23 145 1 1.51851394 0.121212121 0.391304348 0.575757576 23 0 0 33 2R:12275305-12275366 8 28 737 FBgn0000253 25804.84 1958.443333 3036.34 0.001085068 0.014297069 0.009221629 1 1 1 0.2 dme-miR-305-3p 7mer-m1 TGTGCCG 2R 12322937 12322943 - 2R_12322937_12322943_- 0.796921474 0.773486226 0.78520385 0.01657126 CG8841 FBtr0087966|FBtr0087964|FBtr0087965 12322505|12322505|12322505 12323316|12323316|12323316 2R - 12322929 12322974 3'utr CG8841 FlyBase G22409.1 GTTTTTGTAATCTGTGACAGAAAATGTTCCTTGTGCCGTATATTTT 30 12322949 0.727617264 4 30 214 1 1.579783597 0.605263158 0.2 0.368421053 30 0 0 38 2R:12322929-12322974 7 CG8841 FBtr0087965|FBtr0087966|FBtr0087964 12322505|12322505|12322505 12323316|12323316|12323316 TGTGCCG 7mer-m1 dme-miR-305-3p 2R - 12322919 12322963 3'utr CG8841 FlyBase G17000.1 CTGTGACAGAAAATGTTCCTTGTGCCGTATATTTTATTGCATGGT 27 12322950 0.976292033 3 27 185 1 1.602059991 0.65 0.37037037 0.575 27 0 0 40 2R:12322919-12322963 7 27.5 738 FBgn0033713 204.63 7.073333333 10.83333333 0.134388897 3.887841659 2.538461538 6 7 6.5 0.2 dme-miR-282-5p 6mer2-7 GAGGCT 2R 12323140 12323145 - 2R_12323140_12323145_- 0.927826123 0.787061977 0.85744405 0.09953525 CG8841 FBtr0087966|FBtr0087964|FBtr0087965 12322505|12322505|12322505 12323316|12323316|12323316 2R - 12323123 12323171 3'utr CG8841 FlyBase G22410.1 TTTTGCTTATTGGCAACAAAAAAAATGAGGCTTATCAGTTACGATGTGG 104 12323146 0.963285008 5 104 426 1 2.075546961 0.201680672 0.125 0.235294118 104 0 0 119 2R:12323123-12323171 6 CG8841 FBtr0087965|FBtr0087966|FBtr0087964 12322505|12322505|12322505 12323316|12323316|12323316 GAGGCT 6mer2-7 dme-miR-282-5p 2R - 12323126 12323168 3'utr CG8841 FlyBase G17001.1 TGCTTATTGGCAACAAAAAAAATGAGGCTTATCAGTTACGATG 69 12323146 0.985004196 3 66 265 1 1.977723605 0.115789474 0.308823529 0.505263158 68 0 0 95 2R:12323126-12323168 6 83.5 739 FBgn0033713 204.63 7.073333333 10.83333333 0.40805356 11.80490104 7.707692308 1 1 1 0.2 dme-miR-277-3p 7mer-A1 GCATTTA 2R 12323254 12323260 - 2R_12323254_12323260_- 0.822217996 0.820058386 0.821138191 0.001527068 CG8841 FBtr0087966|FBtr0087964|FBtr0087965 12322505|12322505|12322505 12323316|12323316|12323316 2R - 12323234 12323382 stop_codon CG8841 FlyBase G22411.1 CGCAACGTGGAGCCTGCCATCTGGTACGATACGGAGGTCAAGCTCTTCGAGATTCAGCGCGTCTAGGTCAGTAAGTGGACTCCCAGCTACACCAGCAGCGCAATCGTAGCTTACACGCTTTGGCATTTACTGTAGTTAATTTATTTAGT 43 12323262 0.980589189 10 41 292 0.980392157 1.397940009 0.117647059 0.162790698 0.294117647 43 0 1 50 2R:12323234-12323382 7 CG8841 FBtr0087965|FBtr0087966|FBtr0087964 12322505|12322505|12322505 12323316|12323316|12323316 GCATTTA 7mer-A1 dme-miR-277-3p 2R - 12323240 12323283 3'utr CG8841 FlyBase G17002.1 GCAATCGTAGCTTACACGCTTTGGCATTTACTGTAGTTAATTTA 18 12323262 0.714205808 4 15 135 0.84 0.84509804 0.12 0.277777778 0.48 18 2 2 21 2R:12323240-12323283 7 25 740 FBgn0033713 204.63 7.073333333 10.83333333 0.122171725 3.534401508 2.307692308 2 2 2 0.2 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 12333706 12333712 + 2R_12333706_12333712_+ 0.674721007 0.685212761 0.679966884 0.007418823 garz FBtr0087897 12333495 12333860 2R + 12333648 12333746 3'utr garz FlyBase G15178.1 AGCTATCCAGAAAAACAAACCTAAATCACAGATGCGAAGTTCGGCTGAACCCCCTATAAGCTTTAGTAATGCAAATAGTTTAATTAATATTAATTAAAT 287 12333704 0.977839565 10 283 1868 0.984520124 2.201397124 0.018575851 0.111498258 0.210526316 287 4 1 318 2R:12333648-12333746 7 garz FBtr0087897 12333495 12333860 AGCTTTA 7mer-A1 dme-miR-79-3p 2R + 12333681 12333732 3'utr garz FlyBase G11521.1 GCGAAGTTCGGCTGAACCCCCTATAAGCTTTAGTAATGCAAATAGTTTAATT 188 12333704 0.827074714 6 185 1164 0.988679245 2.418301291 0.018867925 0.308510638 0.509433962 188 3 0 262 2R:12333681-12333732 7 226 741 FBgn0264560 903.09 16.44 25.09666667 0.250251913 13.74695864 9.005179971 2 2 2 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 12339635 12339642 - 2R_12339635_12339642_- 0.624719453 0.624714599 0.624717026 3.46E-06 CG8839 FBtr0087957|FBtr0087959|FBtr0087958|FBtr0087960 12339608|12339608|12339608|12339608 12339892|12339892|12339892|12339892 2R - 12339620 12339719 3'utr CG8839 FlyBase G22424.1 TCGATGTGGATTTATCTATTTTGTATGTGTTTTTAAATGTAATCTAATCATAGATCCGCGCGGATCCGTTCCCGTTTTGCATTTATAATAAATAATTGCA 26 12339643 0.991061188 8 24 260 0.933333333 1.146128036 0.166666667 0.153846154 0.266666667 26 1 1 28 2R:12339620-12339719 8 CG8839 FBtr0087958|FBtr0087960|FBtr0087957|FBtr0087959 12339608|12339608|12339608|12339608 12339892|12339892|12339892|12339892 TGCATTTA 8mer-A1 dme-miR-277-3p 2R - 12339626 12339704 3'utr CG8839 FlyBase G17018.1 CTATTTTGTATGTGTTTTTAAATGTAATCTAATCATAGATCCGCGCGGATCCGTTCCCGTTTTGCATTTATAATAAATA 20 12339643 0.748667447 7 17 180 0.911764706 1.014240439 0.176470588 0.5 0.705882353 20 1 2 31 2R:12339626-12339704 8 13.5 742 FBgn0033717 1014.353333 58.28666667 87.84 0.013308972 0.231613863 0.153688525 1 1 1 0.2 dme-miR-980-3p 6mer2-7 GCAGCT 2R 12339863 12339868 - 2R_12339863_12339868_- 0.8616706 0.649324891 0.755497746 0.150151084 CG8839 FBtr0087957|FBtr0087959|FBtr0087958|FBtr0087960 12339608|12339608|12339608|12339608 12339892|12339892|12339892|12339892 2R - 12339725 12339984 stop_codon CG8839 FlyBase G22425.1 CCAACTTCAATCAGGATCGACTTTGTTTGGCCGTTGCCGAGGAATTGGAGCGAGCCTTTGGCGGTTGGGCCAAGCCCGAAGTTCGGCTCTAGGAGCAGTCTCAAACGTGCAAGTATGCAGCTTAGCTAGCTTTTAGATAGTAGTGGTCAGGTTAACGTCCTGGTCTCCCCCCACCCATTACTAACTACCCCTACCCACCCGAGCATTCGCCTGGCGATGAAAGGTATTCCTTGTGTACTCCAGTGCCTCATTGTAATATC 87 12339868 0.978622762 29 83 564 0.962616822 1.53571597 0.261682243 0.16091954 0.317757009 87 2 2 103 2R:12339725-12339984 6 CG8839 FBtr0087958|FBtr0087960|FBtr0087957|FBtr0087959 12339608|12339608|12339608|12339608 12339892|12339892|12339892|12339892 GCAGCT 6mer2-7 dme-miR-980-3p 2R - 12339720 12339900 stop_codon CG8839 FlyBase G17019.1 GGCTCTAGGAGCAGTCTCAAACGTGCAAGTATGCAGCTTAGCTAGCTTTTAGATAGTAGTGGTCAGGTTAACGTCCTGGTCTCCCCCCACCCATTACTAACTACCCCTACCCACCCGAGCATTCGCCTGGCGATGAAAGGTATTCCTTGTGTACTCCAGTGCCTCATTGTAATATCAATTT 50 12339869 0.861418317 23 47 316 0.934210526 1.851258349 0.25 0.44 0.631578947 50 5 0 71 2R:12339720-12339900 6 23 743 FBgn0033717 1014.353333 58.28666667 87.84 0.022674545 0.394601395 0.261839709 0 1 0.5 0.2 dme-miR-252-5p 7mer-m8 GTACTTA 2R 12425347 12425353 + 2R_12425347_12425353_+ 0.586064601 0.586108318 0.586086459 3.09E-05 CG8520 FBtr0303222|FBtr0087926 12425250|12425250 12425459|12425459 2R + 12425333 12425376 3'utr CG8520 FlyBase G15212.1 ATTCACAATATCTTGTACTTACAAATTTCATATCGAAAATGCAA 16 12425346 0.939407031 2 16 150 1 1.342422681 0.045454545 0.25 0.454545455 16 0 0 22 2R:12425333-12425376 7 CG8520 FBtr0303222|FBtr0087926 12425250|12425250 12425459|12425459 GTACTTA 7mer-m8 dme-miR-252-5p 2R + 12425335 12425367 3'utr CG8520 FlyBase G11545.1 TCACAATATCTTGTACTTACAAATTTCATATCG 13 12425346 0.727559962 2 12 101 1 1.255272505 0.111111111 0.230769231 0.444444444 13 0 0 18 2R:12425335-12425367 7 14 744 FBgn0033734 185.89 13.06 20.03333333 0.075313357 1.071975498 0.698835275 1 1 1 0.2 dme-miR-1008-3p 8mer-A1 AGCTGTGA 2R 12436888 12436895 + 2R_12436888_12436895_+ 0.59878249 0.635684568 0.617233529 0.026093725 CG30051 FBtr0114521 12436846 12436990 2R + 12436864 12436958 3'utr CG30051 FlyBase G15218.1 ACATGCAGTTAAAAGCACAAGTAGAGCTGTGAAATTATATGTTATGCTTTAAATGGATTTTCCTGTCATCTAGATGTAGTTTGCTGCACAGCTCT 35 12436885 0.965363005 11 31 303 0.894736842 1.531478917 0.289473684 0.085714286 0.157894737 35 4 0 34 2R:12436864-12436958 8 CG30051 FBtr0114521 12436846 12436990 AGCTGTGA 8mer-A1 dme-miR-1008-3p 2R + 12436864 12436956 3'utr CG30051 FlyBase G11549.1 ACATGCAGTTAAAAGCACAAGTAGAGCTGTGAAATTATATGTTATGCTTTAAATGGATTTTCCTGTCATCTAGATGTAGTTTGCTGCACAGCT 25 12436898 0.787843206 12 23 182 0.925 1.267171728 0.2 0.44 0.65 25 2 1 37 2R:12436864-12436956 8 16.5 745 FBgn0050051 28.33333333 5.406666667 8.236666667 0.582352941 3.051787916 2.003237556 3 -10 -3.5 0.2 dme-miR-79-3p 7mer-m8 TAGCTTT 2R 12452116 12452122 + 2R_12452116_12452122_+ 0.573896796 0.581023891 0.577460344 0.005039621 Dyb FBtr0305077|FBtr0100298|FBtr0087929|FBtr0308613|FBtr0087930 12452039|12452039|12451987|12452039|12451987 12452916|12452916|12452916|12452916|12452916 2R + 12452028 12452156 stop_codon Dyb FlyBase G15221.1 GCAGAAGAACTAAGAACTGGCTACCAGTGGAAACCGCAGGACTGGGAATCTCCAGAGGCAGCTGGATGGATGAAGACGAATTCTCGCTTAGCTTTCTACCTTACCTTAACTCATACGTTGACTTAGAGC 22 12452115 0.983257715 12 22 141 1 1.361727836 0.260869565 0.045454545 0.086956522 22 0 0 23 2R:12452028-12452156 7 Dyb FBtr0087930|FBtr0087929|FBtr0308613|FBtr0305077|FBtr0100298 12451987|12451987|12452039|12452039|12452039 12452916|12452916|12452916|12452916|12452916 TAGCTTT 7mer-m8 dme-miR-79-3p 2R + 12452071 12452134 3'utr Dyb FlyBase G11550.1 GGGAATCTCCAGAGGCAGCTGGATGGATGAAGACGAATTCTCGCTTAGCTTTCTACCTTACCTT 17 12452115 0.98766672 5 17 151 1 1.380211242 0.083333333 0.294117647 0.5 17 0 0 24 2R:12452071-12452134 7 13 746 FBgn0033739 253.3333333 9.266666667 14.15666667 0.051315789 1.402877698 0.918295267 1 1 1 0.2 dme-miR-184-3p 6mer2-7 CCGTCC 2R 12465246 12465251 + 2R_12465246_12465251_+ 0.804388613 0.882238002 0.843313308 0.055047839 Lac FBtr0087933 12464880 12465630 2R + 12464976 12465277 3'utr Lac FlyBase G15230.1 GAAAACAAACATCGTGTAACCGCGCAATAGATGTCTCAAACGATTTCGGACACACCAACCCACATCCAGTTCTCAGTTCGTTTTGTAGCTTCTGCTTCCGTTTCCGTATAGTCCAGCCCAATTTTTGTACGTCCAATATTATGTCTTAAGTTAAGTATGATAAGTGAAGGGCCAACGATAACTAGACTATAATTTATTAGCACCCTAGAGCCGAACTCAAACCGAAATTAGACTCCAGCCCAGCCGTAAACGATGCATTTCACCTTGATCCCGTCCGTTTTGCTTTCTGATCTGGCACTGTA 852 12465244 0.954398896 52 806 7154 0.953712633 1.881252939 0.128254581 0.170187793 0.318225651 852 36 12 989 2R:12464976-12465277 6 Lac FBtr0087933 12464880 12465630 CCGTCC 6mer2-7 dme-miR-184-3p 2R + 12465016 12465303 3'utr Lac FlyBase G11559.1 CGATTTCGGACACACCAACCCACATCCAGTTCTCAGTTCGTTTTGTAGCTTCTGCTTCCGTTTCCGTATAGTCCAGCCCAATTTTTGTACGTCCAATATTATGTCTTAAGTTAAGTATGATAAGTGAAGGGCCAACGATAACTAGACTATAATTTATTAGCACCCTAGAGCCGAACTCAAACCGAAATTAGACTCCAGCCCAGCCGTAAACGATGCATTTCACCTTGATCCCGTCCGTTTTGCTTTCTGATCTGGCACTGTATATGTTTTAAATATTTTAATCTAAGC 512 12465244 0.985407996 44 490 4033 0.963824289 2.270678836 0.111111111 0.349609375 0.569767442 512 25 3 746 2R:12465016-12465303 6 498.5 747 FBgn0010238 279.02 15.78666667 24.22666667 1.786610279 31.57728041 20.57649972 2 2 2 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 12487565 12487572 - 2R_12487565_12487572_- 0.499651375 0.493744283 0.496697829 0.00417695 fdl FBtr0346633 12487449 12488439 2R - 12487555 12487618 3'utr fdl FlyBase G22470.1 TTCAACATTTGGAATGATTGATAGGATCCTTATGCAACTTGTTTTCGTACTTAAGACTTTCAAA 11 12487588 0.669967709 10 11 89 1 1.041392685 0.181818182 0 0 11 0 0 11 2R:12487555-12487618 8 fdl FBtr0346633 12487449 12488439 GTACTTAA 8mer-A1 dme-miR-252-5p 2R - 12487546 12487616 3'utr fdl FlyBase G17050.1 CAACATTTGGAATGATTGATAGGATCCTTATGCAACTTGTTTTCGTACTTAAGACTTTCAAAGAAAATATC 11 12487600 0.98570665 8 10 88 0.928571429 1.113943352 0 0.181818182 0.357142857 11 1 0 13 2R:12487546-12487616 8 3.5 748 FBgn0045063 1364.66 46.87666667 71.74333333 0.002564741 0.074664012 0.048785021 16 28 22 0.2 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2R 12507934 12507940 - 2R_12507934_12507940_- 0.803898677 0.80068542 0.802292048 0.002272146 vis FBtr0087945|FBtr0087945|FBtr0087944|FBtr0087944 12507894|12507894|12507894|12507894 12508268|12508268|12508268|12508268 2R - 12507925 12507954 3'utr vis FlyBase G22491.1 GTGTACACTACTGATACTTAAATAAAACAA 5 12507943 0.798321824 2 5 32 1 0.698970004 0.6 0 0 5 0 0 5 2R:12507925-12507954 7 vis FBtr0087945|FBtr0087945|FBtr0087944|FBtr0087944 12507894|12507894|12507894|12507894 12508268|12508268|12508268|12508268 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2R - 12507928 12507970 3'utr vis FlyBase G17062.1 TTTTAAACTTAACATTGTGTACACTACTGATACTTAAATAAAA 6 12507943 0.982665454 2 5 40 1 1.041392685 0.272727273 0.333333333 0.636363636 6 0 0 11 2R:12507928-12507970 7 4.5 749 FBgn0033748 6.173333333 0.356666667 0.556666667 0.728941685 12.61682243 8.083832335 3 3 3 0.2 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2R 12511757 12511763 - 2R_12511757_12511763_- 0.798962313 0.800607224 0.799784768 0.00116312 achi FBtr0339635|FBtr0339635|FBtr0087942|FBtr0087942|FBtr0087943|FBtr0087943 12511532|12511532|12511532|12511532|12511532|12511532 12512070|12512070|12512070|12512070|12512070|12512070 2R - 12511728 12511820 3'utr achi FlyBase G22494.1 AACAAATCGACTTAGTTTTGGACCTGACTCTTTTAAACTTAACATGTACACTACTGATACTTAAATAAAACATAAACAAGCATTTGAAATACA 12 12511766 0.985463607 6 12 97 1 1.113943352 0.153846154 0.083333333 0.153846154 12 0 0 13 2R:12511728-12511820 7 achi FBtr0339635|FBtr0339635|FBtr0087942|FBtr0087942|FBtr0087943|FBtr0087943 12511532|12511532|12511532|12511532|12511532|12511532 12512070|12512070|12512070|12512070|12512070|12512070 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2R - 12511730 12511817 3'utr achi FlyBase G17065.1 AAATCGACTTAGTTTTGGACCTGACTCTTTTAAACTTAACATGTACACTACTGATACTTAAATAAAACATAAACAAGCATTTGAAATA 8 12511766 0.980265247 6 8 60 1 0.954242509 0 0.125 0.222222222 8 0 0 9 2R:12511730-12511817 7 4.5 750 FBgn0033749 292.4933333 16.57 25.38 0.015384966 0.271575136 0.177304965 3 3 3 0.2 dme-miR-12-5p 6mer3-8 AATACT 2R 12575330 12575335 - 2R_12575330_12575335_- 0.994840099 0.648064239 0.821452169 0.24520759 Sin3A FBtr0303565|FBtr0087889|FBtr0087890|FBtr0339651|FBtr0087887|FBtr0347014|FBtr0339650|FBtr0087888|FBtr0304683|FBtr0303566 12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238 12575974|12578533|12575974|12577703|12575974|12578162|12575974|12577560|12575974|12577560 2R - 12575314 12575363 3'utr Sin3A FlyBase G22506.1 ACATACAAACCGTGTACAATTCCTTGTGAATACTATTGTTTATATATTTT 38 12575341 0.71286501 10 35 333 0.941176471 1.681241237 0.411764706 0.210526316 0.411764706 38 3 0 48 2R:12575314-12575363 6 Sin3A FBtr0303566|FBtr0304683|FBtr0087888|FBtr0339650|FBtr0347014|FBtr0087887|FBtr0339651|FBtr0087890|FBtr0087889|FBtr0303565 12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238 12577560|12575974|12577560|12575974|12578162|12575974|12577703|12575974|12578533|12575974 AATACT 6mer3-8 dme-miR-12-5p 2R - 12575239 12575364 3'utr Sin3A FlyBase G17074.1 CACATACAAACCGTGTACAATTCCTTGTGAATACTATTGTTTATATATTTTACGCGTTTAAGGTTATTAAGTTAAATTGTAAAAATGTATTGCGCAGATATTAAAACAAAAGTTTATCAAAAGTGA 28 12575341 0.984253006 15 28 224 1 1.643452676 0.227272727 0.392857143 0.613636364 28 0 0 44 2R:12575239-12575364 6 22.5 751 FBgn0022764 4529.02 67.97 103.85 0.004967962 0.331028395 0.216658642 6 6 6 0.2 dme-miR-305-5p 7mer-A1 GTACAAA 2R 12575718 12575724 - 2R_12575718_12575724_- 0.767008164 0.742455468 0.754731816 0.017361381 Sin3A FBtr0303565|FBtr0087889|FBtr0087890|FBtr0339651|FBtr0087887|FBtr0347014|FBtr0339650|FBtr0087888|FBtr0304683|FBtr0303566 12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238 12575974|12578533|12575974|12577703|12575974|12578162|12575974|12577560|12575974|12577560 2R - 12575658 12575952 3'utr Sin3A FlyBase G22508.1 CGGCAGTGGTCGCTGCATGGCCAGATTCTTCATTCACATGACGACAATGAGAAGATGTGGGATGAATTGCCTGCATTGAAATAAATAGTGTTTTAAATGTGATACCAGTTCCTCGACGCGGTCATCGAGATTGCAGCTATACCAACGCGCGATCGACTGTTTAATGTCCGGCATGGCATTGGGCTCTGGAAATTGATTGATGAACGAAGGAAAGCTCTTTTTCATATTGTACAAAAAGTCATTTAATCTTAGGCGAAAGTGCTCCTAAATAAGAATTTTATAGTCTTACGTTGCA 413 12575726 0.840210234 60 385 2778 0.939516129 2.066325925 0.221774194 0.157384988 0.298387097 413 27 3 466 2R:12575658-12575952 7 Sin3A FBtr0303566|FBtr0304683|FBtr0087888|FBtr0339650|FBtr0347014|FBtr0087887|FBtr0339651|FBtr0087890|FBtr0087889|FBtr0303565 12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238 12577560|12575974|12577560|12575974|12578162|12575974|12577703|12575974|12578533|12575974 GTACAAA 7mer-A1 dme-miR-305-5p 2R - 12575667 12575952 3'utr Sin3A FlyBase G17076.1 CGGCAGTGGTCGCTGCATGGCCAGATTCTTCATTCACATGACGACAATGAGAAGATGTGGGATGAATTGCCTGCATTGAAATAAATAGTGTTTTAAATGTGATACCAGTTCCTCGACGCGGTCATCGAGATTGCAGCTATACCAACGCGCGATCGACTGTTTAATGTCCGGCATGGCATTGGGCTCTGGAAATTGATTGATGAACGAAGGAAAGCTCTTTTTCATATTGTACAAAAAGTCATTTAATCTTAGGCGAAAGTGCTCCTAAATAAGAATTTTATAGTCT 271 12575726 0.984678798 50 234 1867 0.871536524 1.760924848 0.214105793 0.332103321 0.544080605 271 46 5 346 2R:12575667-12575952 7 102 752 FBgn0022764 4529.02 67.97 103.85 0.022521428 1.500662057 0.982185845 2 2 2 0.2 dme-miR-33-5p 7mer-m1 AATGCAC 2R 12616087 12616093 + 2R_12616087_12616093_+ 0.548012599 0.552035688 0.550024143 0.002844761 CG45086 FBtr0344532|FBtr0344531 12613656|12613656 12619820|12619820 2R + 12616010 12616097 5'utr-coding CG45086 FlyBase G15300.1 AGCAATAGCAATAGCCAAAGAGAGCCTGGATCGTAAGCGCTGGAGGAGGTCTGCAGAGCGAGCAAAGCCGAAGTACAAATGCACCAAT 13 12616089 0.994925438 5 12 26 0.888888889 1.204119983 0.166666667 0.307692308 0.5 13 2 0 16 2R:12616010-12616097 7 CG45086 FBtr0344531|FBtr0344532 12613656|12613656 12619820|12619820 AATGCAC 7mer-m1 dme-miR-33-5p 2R + 12615988 12616092 5'utr-coding CG45086 FlyBase G11601.1 AACTTAGCGTAGACCCGTAATTAGCAATAGCAATAGCCAAAGAGAGCCTGGATCGTAAGCGCTGGAGGAGGTCTGCAGAGCGAGCAAAGCCGAAGTACAAATGCA 12 12616089 0.935843116 7 9 37 0.782608696 0.954242509 0.086956522 0.583333333 0.782608696 12 4 1 18 2R:12615988-12616092 6 4 753 FBgn0266487 1140.346667 45.66 70.03666667 0.003507705 0.08760403 0.057112941 -2 -2 -2 0.2 dme-miR-995-5p 6mer3-8 AATTCG 2R 12618047 12618052 + 2R_12618047_12618052_+ 0.985079195 0.860515526 0.92279736 0.088079837 CG45086 FBtr0344532|FBtr0344531 12613656|12613656 12619820|12619820 2R + 12617992 12618095 3'utr CG45086 FlyBase G15304.1 AATGGAGGAATCTAAAGCTTTATTTCGTACTATAATTACATACCCTTGGTTTCAAAATTCGTCAGTTATTCTTTTCCTGAATAAGAAGGACTTGTTGGAAGAGA 25 12618049 0.987974227 11 24 210 0.96969697 1.204119983 0.060606061 0.2 0.393939394 25 0 1 32 2R:12617992-12618095 6 CG45086 FBtr0344531|FBtr0344532 12613656|12613656 12619820|12619820 AATTCG 6mer3-8 dme-miR-995-5p 2R + 12617993 12618060 3'utr CG45086 FlyBase G11606.1 ATGGAGGAATCTAAAGCTTTATTTCGTACTATAATTACATACCCTTGGTTTCAAAATTCGTCAGTTAT 17 12618037 0.788994099 8 14 151 0.869565217 1 0.043478261 0.352941176 0.52173913 17 2 1 20 2R:12617993-12618060 6 10 754 FBgn0266487 1140.346667 45.66 70.03666667 0.008769263 0.219010074 0.142782352 -2 10 4 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 2R 12619174 12619180 + 2R_12619174_12619180_+ 0.521148638 0.521214318 0.521181478 4.65E-05 CG45086 FBtr0344532|FBtr0344531 12613656|12613656 12619820|12619820 2R + 12619137 12619195 stop_codon CG45086 FlyBase G15306.1 TTTGGTCTAAACTGGATTTGGATCGAAAAACTATTTTTGTGATTTTTATACAAACACAC 34 12619172 0.865569687 9 33 412 0.976744186 1.62324929 0 0.176470588 0.348837209 34 1 0 42 2R:12619137-12619195 7 CG45086 FBtr0344531|FBtr0344532 12613656|12613656 12619820|12619820 TGTGATT 7mer-m1 dme-miR-308-3p 2R + 12619137 12619189 stop_codon CG45086 FlyBase G11608.1 TTTGGTCTAAACTGGATTTGGATCGAAAAACTATTTTTGTGATTTTTATACAA 18 12619173 0.993389353 5 18 219 1 1.431363764 0 0.388888889 0.592592593 18 0 0 27 2R:12619137-12619189 7 24 755 FBgn0266487 1140.346667 45.66 70.03666667 0.021046232 0.525624179 0.342677645 2 1 1.5 0.2 dme-miR-184-3p 8mer-A1 TCCGTCCA 2R 12621531 12621538 + 2R_12621531_12621538_+ 0.630980919 0.630830267 0.630905593 0.00010649 Galphaq FBtr0304955 12619145 12623197 2R + 12621497 12621551 3'utr Galphaq FlyBase G15313.1 GACATTCACACACTGACATACATATATATAGTTTTCCGTCCAATGAATTGCATCA 41 12621530 0.986135704 6 40 339 0.979591837 1.681241237 0.306122449 0.170731707 0.306122449 41 1 0 48 2R:12621497-12621551 8 Galphaq FBtr0304955 12619145 12623197 TCCGTCCA 8mer-A1 dme-miR-184-3p 2R + 12621511 12621545 3'utr Galphaq FlyBase G11613.1 GACATACATATATATAGTTTTCCGTCCAATGAATT 23 12621530 0.699414063 3 21 186 0.896551724 1.414973348 0.413793103 0.260869565 0.413793103 23 3 0 26 2R:12621511-12621545 8 31.5 756 FBgn0004435 2624.776667 94.95333333 145.51 0.012001021 0.331741908 0.216479967 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 12628846 12628852 - 2R_12628846_12628852_- 0.801702394 0.765541465 0.78362193 0.025569618 muskelin FBtr0087886|FBtr0087886|FBtr0087886|FBtr0333103|FBtr0333103|FBtr0333103 12628695|12628695|12628695|12628695|12628695|12628695 12629027|12629027|12629027|12629027|12629027|12629027 2R - 12628818 12628862 3'utr muskelin FlyBase G22558.1 ATGATTTTATTGTGATAGTTCACGTGTACTGAAACCCCGGCTAAA 35 12628837 0.786825647 7 34 301 0.977272727 1.33243846 0.386363636 0.228571429 0.386363636 35 0 1 43 2R:12628818-12628862 7 muskelin FBtr0333103|FBtr0333103|FBtr0333103|FBtr0087886|FBtr0087886|FBtr0087886 12628695|12628695|12628695|12628695|12628695|12628695 12629027|12629027|12629027|12629027|12629027|12629027 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 12628818 12628882 3'utr muskelin FlyBase G17109.1 ATGCAAAGCATGACATATATATGATTTTATTGTGATAGTTCACGTGTACTGAAACCCCGGCTAAA 22 12628838 0.90473748 7 20 158 0.935483871 1.462397998 0.35483871 0.272727273 0.483870968 22 2 0 29 2R:12628818-12628882 7 25 757 FBgn0033757 131.3333333 5.313333333 8.116666667 0.19035533 4.705144291 3.080082136 -15 -14 -14.5 0.2 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2R 12640418 12640424 + 2R_12640418_12640424_+ 0.674234333 0.552027496 0.613130914 0.086413257 Iswi FBtr0087843|FBtr0087843|FBtr0087842|FBtr0087842|FBtr0087841|FBtr0087841 12640336|12640336|12640336|12640336|12640336|12640336 12640628|12640628|12640628|12640628|12640628|12640628 2R + 12640341 12640472 3'utr Iswi FlyBase G15351.1 GACAAAGCAAACAGATATTTTTCTGAGATTCGGCTCTACACTCAGCACTAGGCAGTTAAATAGTTAAGACAAGCGATTACTTAAACATATTTTACTCTATATAGTTAATAGTTCATATCTCACGCCGGAAGC 67 12640417 0.972699139 19 64 402 0.966292135 1.633468456 0.101123596 0.23880597 0.426966292 67 2 1 86 2R:12640341-12640472 7 Iswi FBtr0087843|FBtr0087843|FBtr0087842|FBtr0087842|FBtr0087841|FBtr0087841 12640336|12640336|12640336|12640336|12640336|12640336 12640628|12640628|12640628|12640628|12640628|12640628 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2R + 12640358 12640437 3'utr Iswi FlyBase G11638.1 TTTTTCTGAGATTCGGCTCTACACTCAGCACTAGGCAGTTAAATAGTTAAGACAAGCGATTACTTAAACATATTTTACTC 18 12640417 0.880993099 7 17 109 0.928571429 1.414973348 0.035714286 0.444444444 0.642857143 18 2 0 26 2R:12640358-12640437 7 16.5 758 FBgn0011604 1337.66 45.99333333 70.94 0.012334973 0.358747645 0.232590922 1 1 1 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 12640583 12640589 + 2R_12640583_12640589_+ 0.660508292 0.657794905 0.659151598 0.001918664 Iswi FBtr0087843|FBtr0087842|FBtr0087841 12640336|12640336|12640336 12640628|12640628|12640628 2R + 12640538 12640622 3'utr Iswi FlyBase G15352.1 ACATTACTATTGCGTGCCGCTGTATTCTATTCCAAATAATTGTATTGTGTTCTAAGACTATAATCATTATATTTATATAAATCAA 64 12640582 0.719276264 16 63 566 0.973684211 1.86923172 0.118421053 0.1875 0.315789474 64 2 0 74 2R:12640538-12640622 7 Iswi FBtr0087843|FBtr0087842|FBtr0087841 12640336|12640336|12640336 12640628|12640628|12640628 TGTGTTC 7mer-m8 dme-miR-317-3p 2R + 12640504 12640623 3'utr Iswi FlyBase G11640.1 AAGTTTTTTTAAACACCCGCCTACACATCCGACTACATTACTATTGCGTGCCGCTGTATTCTATTCCAAATAATTGTATTGTGTTCTAAGACTATAATCATTATATTTATATAAATCAAC 44 12640582 0.987468251 16 43 378 0.985714286 1.838849091 0.2 0.409090909 0.628571429 44 1 0 69 2R:12640504-12640623 7 27 759 FBgn0011604 1337.66 45.99333333 70.94 0.020184501 0.5870416 0.380603327 1 1 1 0.2 dme-miR-34-5p 6mer2-7 ACTGCC 2R 1266501 1266506 + 2R_1266501_1266506_+ 0.976736834 0.996352682 0.986544758 0.013870536 CG40191 FBtr0113825 1266025 1267747 2R + 1266460 1266520 3'utr CG40191 FlyBase G12545.1 ATACATACAAGCTGTAATATGTTGCGCTATACTTCAAAGTTACTGCCTTACACTGACCGAA 22 1266499 0.961511361 6 22 164 1 1.414973348 0.115384615 0.181818182 0.307692308 22 0 0 26 2R:1266460-1266520 6 CG40191 FBtr0113825 1266025 1267747 ACTGCC 6mer2-7 dme-miR-34-5p 2R + 1266458 1266512 3'utr CG40191 FlyBase G9611.1 TTATACATACAAGCTGTAATATGTTGCGCTATACTTCAAAGTTACTGCCTTACAC 14 1266499 0.980579351 7 14 96 1 1.322219295 0.142857143 0.357142857 0.571428571 14 0 0 21 2R:1266458-1266512 6 15.5 760 FBgn0058191 1436.35 98.49 150.6766667 0.010791242 0.157376383 0.102869279 2 2 2 0.2 dme-miR-252-5p 6mer3-8 GTACTT 2R 12670961 12670966 - 2R_12670961_12670966_- 0.981268186 0.966641886 0.973955036 0.010342356 CG42708 FBtr0302976|FBtr0302977|FBtr0302975|FBtr0302974|FBtr0302973|FBtr0344191|FBtr0302972 12670481|12670481|12670481|12670481|12670604|12670481|12670604 12671175|12671175|12671175|12671175|12671175|12671175|12671175 2R - 12670817 12670996 3'utr CG42708 FlyBase G22583.1 CGAGGCGGATCCACTGCACGAGCGGCATTTGTACTTGTACTTGGTAGCGCTTAGTTAGCCACAAAAATTCCATGTTATCCTACGAAACAATGACAATAATCTTAACGGATATCTAACTTTCCCACATAACTGGGGTCTGTGACCTGCCTAAATGTATTGCATTCGTACTTGTCAATTGAT 105 12670968 0.984096722 21 102 806 0.959016393 2.068185862 0.073770492 0.161904762 0.278688525 105 5 0 117 2R:12670817-12670996 6 CG42708 FBtr0302974|FBtr0302975|FBtr0302977|FBtr0302976|FBtr0302972|FBtr0344191|FBtr0302973 12670481|12670481|12670481|12670481|12670604|12670481|12670604 12671175|12671175|12671175|12671175|12671175|12671175|12671175 GTACTT 6mer3-8 dme-miR-252-5p 2R - 12670926 12670991 3'utr CG42708 FlyBase G17127.1 CGGATCCACTGCACGAGCGGCATTTGTACTTGTACTTGGTAGCGCTTAGTTAGCCACAAAAATTCC 30 12670968 0.986021563 6 29 243 0.977272727 1.633468456 0.045454545 0.266666667 0.5 30 1 0 43 2R:12670926-12670991 6 54 761 FBgn0261625 1259.506667 54.11 83.17333333 0.042873929 0.997967104 0.649246553 2 2 2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 12750677 12750683 + 2R_12750677_12750683_+ 0.539610738 0.540970797 0.540290767 0.000961736 CG42663 FBtr0302645|FBtr0302645|FBtr0302645|FBtr0302644|FBtr0302644|FBtr0302644|FBtr0310576|FBtr0310576|FBtr0310576 12750597|12750597|12750597|12750597|12750597|12750597|12750597|12750597|12750597 12751545|12751545|12751545|12751545|12751545|12751545|12751545|12751545|12751545 2R + 12750651 12750763 3'utr CG42663 FlyBase G15384.1 TATTTAAAGATTTAAAAAGACTAAATTGTGATATATTCAAACAAAACAAAACCGAATCGAGAGTTACAGAAGCATTAAGAGATGATGGCCAGGATGAGCAGGCACGTTTTGTA 394 12750676 0.982193439 16 369 2739 0.936734694 1.36078269 0.026530612 0.198473282 0.357142857 393 12 19 459 2R:12750651-12750763 7 CG42663 FBtr0310576|FBtr0310576|FBtr0310576|FBtr0302644|FBtr0302644|FBtr0302644|FBtr0302645|FBtr0302645|FBtr0302645 12750597|12750597|12750597|12750597|12750597|12750597|12750597|12750597|12750597 12751545|12751545|12751545|12751545|12751545|12751545|12751545|12751545|12751545 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 12750652 12750762 3'utr CG42663 FlyBase G11663.1 ATTTAAAGATTTAAAAAGACTAAATTGTGATATATTCAAACAAAACAAAACCGAATCGAGAGTTACAGAAGCATTAAGAGATGATGGCCAGGATGAGCAGGCACGTTTTGT 290 12750676 0.825928625 16 271 1963 0.935323383 1.53379516 0.017412935 0.3 0.495024876 290 16 10 376 2R:12750652-12750762 7 323 762 FBgn0261545 747.68 22.44 34.5 0.432002996 14.39393939 9.362318841 1 1 1 0.2 dme-miR-7-5p 7mer-m8 GTCTTCC 2R 12751040 12751046 + 2R_12751040_12751046_+ 0.702383724 0.699388058 0.700885891 0.002118209 CG42663 FBtr0302645|FBtr0302644|FBtr0310576 12750597|12750597|12750597 12751545|12751545|12751545 2R + 12751020 12751092 3'utr CG42663 FlyBase G15386.1 GTAGGTGAACCAAGACTGTAGTCTTCCGCACAAGTCGAGTGTATTCGTAGGACTTGGTTAGAGTTAACCACAT 26 12751038 0.716306019 7 24 131 0.935483871 1.462397998 0.129032258 0.115384615 0.258064516 26 2 0 29 2R:12751020-12751092 7 CG42663 FBtr0310576|FBtr0302644|FBtr0302645 12750597|12750597|12750597 12751545|12751545|12751545 GTCTTCC 7mer-m8 dme-miR-7-5p 2R + 12751009 12751050 3'utr CG42663 FlyBase G11665.1 ATGGTCACGTAGTAGGTGAACCAAGACTGTAGTCTTCCGCAC 14 12751038 0.911693186 4 14 59 1 1.342422681 0.227272727 0.5 0.681818182 14 0 0 22 2R:12751009-12751050 7 16 763 FBgn0261545 747.68 22.44 34.5 0.021399529 0.713012478 0.463768116 2 2 2 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 12751141 12751148 + 2R_12751141_12751148_+ 0.624627991 0.624536377 0.624582184 6.48E-05 CG42663 FBtr0302645|FBtr0302644|FBtr0310576 12750597|12750597|12750597 12751545|12751545|12751545 2R + 12751094 12751199 3'utr CG42663 FlyBase G15387.1 AGCTAATCCGGATTAGTGCTCCTCAGACACAACAGCAGTTGAACATTTGCATTTAAGGGTGAAATATTTCAAAGTGTTTACGATGCAGTATATGATGCATATATAT 91 12751140 0.829062939 8 89 684 0.981481481 2.025305865 0.518518519 0.153846154 0.287037037 91 2 0 106 2R:12751094-12751199 8 CG42663 FBtr0310576|FBtr0302644|FBtr0302645 12750597|12750597|12750597 12751545|12751545|12751545 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 12751094 12751203 3'utr CG42663 FlyBase G11667.1 AGCTAATCCGGATTAGTGCTCCTCAGACACAACAGCAGTTGAACATTTGCATTTAAGGGTGAAATATTTCAAAGTGTTTACGATGCAGTATATGATGCATATATATATAT 63 12751140 0.931687536 7 60 479 0.953488372 1.612783857 0.453488372 0.253968254 0.453488372 63 3 1 82 2R:12751094-12751203 8 58 764 FBgn0261545 747.68 22.44 34.5 0.077573293 2.584670232 1.68115942 1 1 1 0.2 dme-miR-11-3p 7mer-m1 TGTGATG 2R 12849573 12849579 - 2R_12849573_12849579_- 0.535520561 0.53166654 0.53359355 0.00272526 CG17574 FBtr0306580|FBtr0087816|FBtr0306583|FBtr0344926|FBtr0306579|FBtr0306581|FBtr0337029|FBtr0306582|FBtr0331979 12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356 12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736 2R - 12849552 12849644 3'utr CG17574 FlyBase G22629.2 AACTCCAAACTCCTGGTAAAAAACCAAGTGAAAGCGATCGCACAACGAGCCATTTTTATATTCCATGTGATGTATGTAAAGTGTACATATAAC 35 12849585 0.984357853 14 31 306 0.957446809 1.653212514 0.042553191 0.285714286 0.468085106 35 2 0 45 2R:12849552-12849644 7 CG17574 FBtr0306579|FBtr0344926|FBtr0087816|FBtr0306583|FBtr0306580|FBtr0331979|FBtr0306582|FBtr0337029|FBtr0306581 12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356 12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736 TGTGATG 7mer-m1 dme-miR-11-3p 2R - 12849544 12849622 3'utr CG17574 FlyBase G17161.1 ACCAAGTGAAAGCGATCGCACAACGAGCCATTTTTATATTCCATGTGATGTATGTAAAGTGTACATATAACTTAAGCGC 32 12849585 0.848008398 13 30 251 0.897959184 1.643452676 0 0.34375 0.571428571 32 5 0 44 2R:12849544-12849622 7 25 765 FBgn0033777 586.8266667 68.93 105.5833333 0.042602018 0.362686784 0.236779795 6 6 6 0.2 dme-miR-184-3p 6mer3-8 TCCGTC 2R 12849703 12849708 - 2R_12849703_12849708_- 0.976038923 0.970592425 0.973315674 0.003851257 CG17574 FBtr0306580|FBtr0087816|FBtr0306583|FBtr0344926|FBtr0306579|FBtr0306581|FBtr0337029|FBtr0306582|FBtr0331979 12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356 12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736 2R - 12849659 12849758 stop_codon CG17574 FlyBase G22630.1 CAATCCCCACTTTGGCCAGTGAAATCGCACTGTGAACTGAGGATCCCCTTTCCGTCTCGTTATAGCTTTTTTACTCAGCTGAACACTTTACTTTCCATGT 490 12849709 0.794385924 20 483 3738 0.988391376 2.298125005 0.615257048 0.173469388 0.328358209 490 5 2 596 2R:12849659-12849758 6 CG17574 FBtr0306579|FBtr0344926|FBtr0087816|FBtr0306583|FBtr0306580|FBtr0331979|FBtr0306582|FBtr0337029|FBtr0306581 12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356 12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736 TCCGTC 6mer3-8 dme-miR-184-3p 2R - 12849670 12849738 stop_codon CG17574 FlyBase G17162.1 GAAATCGCACTGTGAACTGAGGATCCCCTTTCCGTCTCGTTATAGCTTTTTTACTCAGCTGAACACTTT 340 12849709 0.954244996 10 338 2607 0.996062992 2.704150517 0.572834646 0.376470588 0.582677165 340 2 0 506 2R:12849670-12849738 6 398 766 FBgn0033777 586.8266667 68.93 105.5833333 0.678224121 5.773973596 3.769534333 1 1 1 0.2 dme-miR-318-3p 7mer-m8 CCCAGTG 2R 12877548 12877554 - 2R_12877548_12877554_- 0.705852002 0.700509436 0.703180719 0.003777789 Nmda1 FBtr0089878|FBtr0089877|FBtr0309294|FBtr0089875|FBtr0332883|FBtr0089876|FBtr0089873|FBtr0089874|FBtr0309295 12877092|12877092|12877092|12877092|12877092|12877092|12877092|12877092|12877092 12877654|12877654|12877654|12877654|12877654|12877654|12877654|12877654|12877654 2R - 12877420 12877586 3'utr Nmda1 FlyBase G22638.1 ATTGTTGTCGCGTAATCTCATCGGTGTGCTCCCCCAGTGGAGGTAATCTTCAACTAACGAATTACTCAAATACTTACAAATCTATCTACTTCGTGTTGTGTTTGCCCATTTTCCCCGTTTCCTTCTAGTTCTAAATGTCAACTAAGGCTATATGAACTACTTACTTT 42 12877565 0.986632358 23 40 359 0.961538462 1.698970004 0.211538462 0.166666667 0.326923077 42 2 0 50 2R:12877420-12877586 7 Nmda1 FBtr0309295|FBtr0089874|FBtr0089873|FBtr0089876|FBtr0332883|FBtr0089875|FBtr0309294|FBtr0089877|FBtr0089878 12877092|12877092|12877092|12877092|12877092|12877092|12877092|12877092|12877092 12877654|12877654|12877654|12877654|12877654|12877654|12877654|12877654|12877654 CCCAGTG 7mer-m8 dme-miR-318-3p 2R - 12877495 12877595 3'utr Nmda1 FlyBase G17167.1 TACACGAATATTGTTGTCGCGTAATCTCATCGGTGTGCTCCCCCAGTGGAGGTAATCTTCAACTAACGAATTACTCAAATACTTACAAATCTATCTACTTC 23 12877566 0.991751118 8 16 167 0.694444444 0.920818754 0.305555556 0.434782609 0.638888889 23 9 2 25 2R:12877495-12877595 7 10 767 FBgn0013305 2589.41 187.14 285.2633333 0.003861884 0.05343593 0.035055329 11 12 11.5 0.2 dme-bantam-3p 6mer2-7 GATCTC 2R 12924544 12924549 + 2R_12924544_12924549_+ 0.992424631 0.956090122 0.974257377 0.025692371 CG13319 FBtr0087788|FBtr0300890 12924346|12924420 12924664|12924664 2R + 12924513 12924642 5'utr CG13319 FlyBase G15454.2 ACTCTACGCACTCCATCAGCTAACTATCTGGGATCTCCGATTCCCGATCTCCGCTCAGACGTCATGCGGCGGCCGAGTGAGCACGAACTTTAAACGTGTATCGGTGATACGAATTTTGTACAATAAATTT 92 12924540 0.980347566 19 76 578 0.844036697 1.264817823 0.100917431 0.152173913 0.28440367 92 13 4 92 2R:12924513-12924642 6 CG13319 FBtr0300890|FBtr0087788 12924420|12924346 12924664|12924664 GATCTC 6mer2-7 dme-bantam-3p 2R + 12924466 12924653 5'utr CG13319 FlyBase G11726.1 CGTCTATTTCGGGGACCGGCGGCTACCCCACGGACGCAGCTTCACGTACTCTACGCACTCCATCAGCTAACTATCTGGGATCTCCGATTCCCGATCTCCGCTCAGACGTCATGCGGCGGCCGAGTGAGCACGAACTTTAAACGTGTATCGGTGATACGAATTTTGTACAATAAATTTATTGCCCTAAG 94 12924540 0.984274652 21 86 571 0.938356164 1.835690571 0.212328767 0.404255319 0.616438356 94 8 1 137 2R:12924466-12924653 6 38 768 FBgn0033781 91.88 17.2 26.15333333 0.413582934 2.209302326 1.452969666 4 4 4 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 2R 12934398 12934403 - 2R_12934398_12934403_- 0.705869529 0.808934879 0.757402204 0.072878243 CG13322 FBtr0087803|FBtr0087804|FBtr0087805 12934232|12934232|12934232 12934751|12934751|12934751 2R - 12934376 12934440 3'utr CG13322 FlyBase G22668.1 AGCTCAATCATCGGAAACCACATGTGTATATAACTAATTGACTTGAAGGCGGAGCAGAAGGTAGA 36 12934403 0.973285421 6 35 208 0.977272727 1.33243846 0.272727273 0.222222222 0.363636364 36 0 1 43 2R:12934376-12934440 6 CG13322 FBtr0087805|FBtr0087804|FBtr0087803 12934232|12934232|12934232 12934751|12934751|12934751 TTGACT 6mer3-8 dme-miR-1012-3p 2R - 12934375 12934421 3'utr CG13322 FlyBase G17188.1 ACATGTGTATATAACTAATTGACTTGAAGGCGGAGCAGAAGGTAGAC 25 12934403 0.972303646 4 23 135 0.903225806 1.146128036 0.032258065 0.24 0.387096774 25 2 1 28 2R:12934375-12934421 6 28.5 769 FBgn0033784 342.93 20 30.73333333 0.08310734 1.425 0.927331887 0 0 0 0.2 dme-miR-14-3p 6mer3-8 AAGACT 2R 12934462 12934467 - 2R_12934462_12934467_- 0.999997961 0.999938642 0.999968301 4.20E-05 CG13322 FBtr0087803|FBtr0087804|FBtr0087805 12934232|12934232|12934232 12934751|12934751|12934751 2R - 12934455 12934507 3'utr CG13322 FlyBase G22669.1 CTGGCCGGAGCAACAACGGACGCATTTGTTTATGTAATTAAAGACTTATCGAC 7 12934459 0.962017095 5 6 33 1 1.041392685 0.090909091 0.428571429 0.636363636 7 0 0 11 2R:12934455-12934507 6 CG13322 FBtr0087805|FBtr0087804|FBtr0087803 12934232|12934232|12934232 12934751|12934751|12934751 AAGACT 6mer3-8 dme-miR-14-3p 2R - 12934445 12934476 3'utr CG13322 FlyBase G17189.1 ATGTAATTAAAGACTTATCGACAAGAATTTTG 11 12934470 0.759583719 6 9 68 0.846153846 0.740362689 0.307692308 0.181818182 0.307692308 11 1 1 11 2R:12934445-12934476 6 7.5 770 FBgn0033784 342.93 20 30.73333333 0.021870353 0.375 0.244034707 -8 3 -2.5 0.2 dme-miR-184-5p 7mer-A1 GATAAGA 2R 12966173 12966179 - 2R_12966173_12966179_- 0.72415928 0.776231764 0.750195522 0.036820818 Psc FBtr0345375 12965995 12966517 2R - 12966143 12966297 3'utr Psc FlyBase G22677.1 ACACAATCCAGCCGAGTTTAGGCTGCCCCCCTTCGGTAGTAGTGAGCCAACGCTCTGTAAATATATAATGATATATACAAATGTCTAGACTTAGGAATTGTATTAAAAATAAACGGAGGATAAGACAGTGATTCAGAATCGATATATATATGCAG 196 12966169 0.942631067 17 189 778 0.959821429 2.33243846 0.107142857 0.117346939 0.227678571 196 9 0 215 2R:12966143-12966297 7 Psc FBtr0345375 12965995 12966517 GATAAGA 7mer-A1 dme-miR-184-5p 2R - 12966130 12966199 3'utr Psc FlyBase G17195.1 TGTATTAAAAATAAACGGAGGATAAGACAGTGATTCAGAATCGATATATATATGCAGTTATACGAATTAT 118 12966169 0.9431917 7 109 429 0.928176796 1.380211242 0.093922652 0.423728814 0.624309392 118 7 6 168 2R:12966130-12966199 7 142 771 FBgn0005624 501.4 9.713333333 15.04 0.28320702 14.6190803 9.441489362 -10 -10 -10 0.2 dme-bantam-3p 7mer-m8 TGATCTC 2R 13163108 13163114 + 2R_13163108_13163114_+ 0.387752907 0.523799855 0.455776381 0.096199756 Nrk FBtr0087728 13162649 13163484 2R + 13163098 13163149 3'utr Nrk FlyBase G15511.1 TTATACCCTCTGATCTCTCGATCTCGATCGAATAGTCTGCCACAACGAACGC 17 13163128 0.973396519 6 17 110 1 1.301029996 0.35 0.176470588 0.3 17 0 0 20 2R:13163098-13163149 7 Nrk FBtr0087728 13162649 13163484 TGATCTC 7mer-m8 dme-bantam-3p 2R + 13163099 13163150 3'utr Nrk FlyBase G11767.1 TATACCCTCTGATCTCTCGATCTCGATCGAATAGTCTGCCACAACGAACGCA 11 13163128 0.979659276 4 11 78 1 1.230448921 0.058823529 0.454545455 0.647058824 11 0 0 17 2R:13163099-13163150 7 9 772 FBgn0020391 38.01666667 1.393333333 2.09 0.236738273 6.459330144 4.306220096 -20 -20 -20 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 13163173 13163179 + 2R_13163173_13163179_+ 0.661336989 0.661207242 0.661272116 9.18E-05 Nrk FBtr0087728 13162649 13163484 2R + 13163157 13163195 3'utr Nrk FlyBase G15512.1 ACGTCTCGTATCCATATCTAGTCTGTAGATTAAGTTTAT 27 13163180 0.728612195 6 22 282 0.84375 0.954242509 0.0625 0.111111111 0.25 27 3 2 27 2R:13163157-13163195 7 Nrk FBtr0087728 13162649 13163484 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 13163158 13163193 3'utr Nrk FlyBase G11768.1 CGTCTCGTATCCATATCTAGTCTGTAGATTAAGTTT 14 13163180 0.724604605 5 14 138 1 1.278753601 0.105263158 0.285714286 0.473684211 14 0 0 19 2R:13163158-13163193 7 20.5 773 FBgn0020391 38.01666667 1.393333333 2.09 0.539237177 14.71291866 9.80861244 -7 -7 -7 0.2 dme-miR-995-5p 6mer2-7 ATTCGG 2R 13176977 13176982 - 2R_13176977_13176982_- 0.906340647 0.434294581 0.670317614 0.333786928 CG17724 FBtr0339516|FBtr0310499|FBtr0334468|FBtr0087771|FBtr0344197 13176092|13176092|13176551|13176551|13176551 13177352|13177424|13177424|13177424|13177424 2R - 13176939 13177023 3'utr CG17724 FlyBase G22744.1 AAACACACACACGCGAATGGATTTGAGGCGGAATCAAATGCATTCGGTTCACGGCAAACTTAAGAGCATCGTAAATTAAAATAAT 16 13177001 0.945059237 8 16 67 1 1.255272505 0.111111111 0.125 0.222222222 16 0 0 18 2R:13176939-13177023 6 CG17724 FBtr0087771|FBtr0334468|FBtr0310499|FBtr0339516|FBtr0344197 13176551|13176551|13176092|13176092|13176551 13177424|13177424|13177424|13177352|13177424 ATTCGG 6mer2-7 dme-miR-995-5p 2R - 13176933 13177021 3'utr CG17724 FlyBase G17246.1 ACACACACACGCGAATGGATTTGAGGCGGAATCAAATGCATTCGGTTCACGGCAAACTTAAGAGCATCGTAAATTAAAATAATTTTTAC 12 13177005 0.952605222 8 12 56 1 1.230448921 0 0.416666667 0.588235294 12 0 0 17 2R:13176933-13177021 6 4 774 FBgn0033802 568.9 19.27666667 29.39333333 0.007031113 0.207504755 0.13608528 19 23 21 0.2 dme-miR-283-5p 8mer-A1 TGATATTA 2R 13177119 13177126 - 2R_13177119_13177126_- 0.558041067 0.547343278 0.552692172 0.007564487 CG17724 FBtr0339516|FBtr0310499|FBtr0334468|FBtr0087771|FBtr0344197 13176092|13176092|13176551|13176551|13176551 13177352|13177424|13177424|13177424|13177424 2R - 13177089 13177163 3'utr CG17724 FlyBase G22745.2 AGGAATATTAACTCAAACTTAAGCCAAGCTAACTCATTGATATTACCACACTGTTGGATGTGCATACGAAATTTA 96 13177127 0.980161189 8 93 660 0.972222222 1.720159303 0.12962963 0.125 0.222222222 96 2 1 105 2R:13177089-13177163 8 CG17724 FBtr0087771|FBtr0334468|FBtr0310499|FBtr0339516|FBtr0344197 13176551|13176551|13176092|13176092|13176551 13177424|13177424|13177424|13177352|13177424 TGATATTA 8mer-A1 dme-miR-283-5p 2R - 13177095 13177163 3'utr CG17724 FlyBase G17247.1 AGGAATATTAACTCAAACTTAAGCCAAGCTAACTCATTGATATTACCACACTGTTGGATGTGCATACGA 45 13177127 0.979371299 4 44 300 0.984375 1.498310554 0.078125 0.288888889 0.5 45 0 1 63 2R:13177095-13177163 8 65.5 775 FBgn0033802 568.9 19.27666667 29.39333333 0.11513447 3.397890368 2.228396462 1 1 1 0.2 dme-miR-31a-5p 7mer-A1 CTTGCCA 2R 13202654 13202660 + 2R_13202654_13202660_+ 0.703763676 0.549104693 0.626434184 0.109360428 Aats-val FBtr0087735|FBtr0087734|FBtr0333148 13202593|13202593|13202593 13202709|13202709|13202709 2R + 13202631 13202683 3'utr Aats-val FlyBase G15545.1 TAATTGATATTTAGTACGCTTGCCTTGCCAGCTGCTGGGCTTTACTTAAAAAA 16 13202645 0.692754513 9 15 127 0.944444444 1.230448921 0.166666667 0.125 0.222222222 16 1 0 17 2R:13202631-13202683 7 Aats-val FBtr0333148|FBtr0087734|FBtr0087735 13202593|13202593|13202593 13202709|13202709|13202709 CTTGCCA 7mer-A1 dme-miR-31a-5p 2R + 13202629 13202671 3'utr Aats-val FlyBase G11793.1 GGTAATTGATATTTAGTACGCTTGCCTTGCCAGCTGCTGGGCT 8 13202641 0.784879586 6 8 64 1 1.079181246 0.166666667 0.125 0.416666667 8 0 0 12 2R:13202629-13202671 7 11.5 776 FBgn0027079 605.9033333 21.83 33.28 0.018979925 0.526797984 0.345552885 9 13 11 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 2R 13408076 13408082 - 2R_13408076_13408082_- 0.443128696 0.442767529 0.442948113 0.000255407 CG18278 FBtr0087716 13408040 13408169 2R - 13408055 13408134 3'utr CG18278 FlyBase G22804.1 AAAACCAAATTCAAGTCCGCTGGGCGCATATAGATTTCATATTCAGATATCATGTGATTTATGTTGCTATATACATAGTC 31 13408076 0.916453104 13 31 283 1 1.602059991 0.075 0.225806452 0.4 31 0 0 40 2R:13408055-13408134 7 CG18278 FBtr0087716 13408040 13408169 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 13408063 13408097 3'utr CG18278 FlyBase G17296.1 CATATTCAGATATCATGTGATTTATGTTGCTATAT 12 13408076 0.64236075 6 11 115 0.95 1.278753601 0.05 0.5 0.7 12 1 0 19 2R:13408063-13408097 7 18 777 FBgn0033836 254.63 18.40666667 28.13666667 0.070690806 0.977906556 0.639734629 -6 -6 -6 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 2R 13412803 13412809 - 2R_13412803_13412809_- 0.440454262 0.43898157 0.439717916 0.001041356 CG30059 FBtr0087715 13412767 13412896 2R - 13412790 13412861 3'utr CG30059 FlyBase G22812.1 AAAACCAAATTCAAGTCCGCTGGGCGCATATAGATTTCATATTCAGATATCATGTGATTTATGTTGCTATAT 29 13412803 0.94115204 9 26 262 0.894736842 1.531478917 0.026315789 0.275862069 0.447368421 29 4 0 34 2R:13412790-13412861 7 CG30059 FBtr0087715 13412767 13412896 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 13412793 13412849 3'utr CG30059 FlyBase G17301.1 AAGTCCGCTGGGCGCATATAGATTTCATATTCAGATATCATGTGATTTATGTTGCTA 18 13412803 0.665547843 6 14 158 0.80952381 0.929418926 0 0.166666667 0.285714286 18 3 1 17 2R:13412793-13412849 7 17.5 778 FBgn0260475 435.0366667 31.53666667 48.24333333 0.040226494 0.554909629 0.362744421 -6 -6 -6 0.2 dme-bantam-3p 7mer-A1 GATCTCA 2R 13415490 13415496 - 2R_13415490_13415496_- 0.766885303 0.786488887 0.776687095 0.013861838 CG42321 FBtr0299763|FBtr0299755|FBtr0299757|FBtr0299762|FBtr0299761|FBtr0299754|FBtr0299764|FBtr0306698|FBtr0299758|FBtr0299759 13414976|13414976|13414976|13414976|13414976|13414976|13414976|13414976|13414976|13414976 13415517|13415517|13417569|13415517|13415517|13415517|13417569|13415517|13416931|13417569 2R - 13415482 13415519 stop_codon CG42321 FlyBase G22815.1 AAACCGAAAACGATGGGACTCTGGATCTCACGGTGCAC 13 13415498 0.951568484 4 12 57 0.888888889 1.204119983 0.722222222 0.307692308 0.5 13 2 0 16 2R:13415482-13415519 7 CG42321 FBtr0306698|FBtr0299764|FBtr0299762|FBtr0299761|FBtr0299755|FBtr0299759|FBtr0299754|FBtr0299757|FBtr0299758|FBtr0299763 13414976|13414976|13414976|13414976|13414976|13414976|13414976|13414976|13414976|13414976 13415517|13417569|13415517|13415517|13415517|13417569|13415517|13417569|13416931|13415517 GATCTCA 7mer-A1 dme-bantam-3p 2R - 13415470 13415518 stop_codon CG42321 FlyBase G17304.1 AACCGAAAACGATGGGACTCTGGATCTCACGGTGCACATGTATATAGGA 14 13415498 0.966578041 5 13 69 0.947368421 1.255272505 0.421052632 0.357142857 0.526315789 14 1 0 18 2R:13415470-13415518 7 13.5 779 FBgn0259221 191.07 4.566666667 6.95 0.070654734 2.95620438 1.942446043 2 2 2 0.2 dme-miR-317-3p 6mer2-7 GTGTTC 2R 1343931 1343936 - 2R_1343931_1343936_- 0.676021925 0.773332608 0.724677266 0.068809056 Yeti FBtr0344755 1343401 1344290 2R - 1343911 1343959 3'utr Yeti FlyBase G19234.1 AAAAGACGACGCCACCGATAATAGTGTTCGTTTTGTGATTAGATTTGCT 17 1343938 0.989078419 6 17 163 1 1.255272505 0.111111111 0.058823529 0.111111111 17 0 0 18 2R:1343911-1343959 6 Yeti FBtr0344755 1343401 1344290 GTGTTC 6mer2-7 dme-miR-317-3p 2R - 1343925 1343958 3'utr Yeti FlyBase G14622.1 AAAGACGACGCCACCGATAATAGTGTTCGTTTTG 10 1343938 0.982753503 2 9 70 0.952380952 1.301029996 0.238095238 0.6 0.80952381 10 1 0 20 2R:1343925-1343958 6 13.5 780 FBgn0267398 2383.886667 322.18 496.1 0.005663021 0.041902042 0.027212256 2 2 2 0.2 dme-miR-14-3p 7mer-m8 AAGACTG 2R 13439843 13439849 - 2R_13439843_13439849_- 0.664711769 0.661621302 0.663166535 0.002185314 cnn FBtr0309891|FBtr0309889|FBtr0100656|FBtr0309893|FBtr0309892|FBtr0087703|FBtr0100654|FBtr0087704 13439312|13439312|13439312|13439312|13439312|13439312|13439312|13439312 13440071|13440071|13440071|13440071|13440071|13440071|13440071|13440071 2R - 13439815 13439867 3'utr cnn FlyBase G22833.1 ATACCCATGCATTTTCTAAAGACTGTTGAGGGAATCGAACCCATTGAATGAAC 72 13439842 0.769312979 8 69 532 0.9625 1.886490725 0.0375 0.111111111 0.2 72 3 0 77 2R:13439815-13439867 7 cnn FBtr0100654|FBtr0087704|FBtr0309892|FBtr0087703|FBtr0100656|FBtr0309893|FBtr0309891|FBtr0309889 13439312|13439312|13439312|13439312|13439312|13439312|13439312|13439312 13440071|13440071|13440071|13440071|13440071|13440071|13440071|13440071 AAGACTG 7mer-m8 dme-miR-14-3p 2R - 13439765 13439869 3'utr cnn FlyBase G17320.1 AAATACCCATGCATTTTCTAAAGACTGTTGAGGGAATCGAACCCATTGAATGAACTATCACACACACACACACACACACCTGTTTTAAGCACAAAACGAAACTAA 64 13439842 0.980833802 8 61 433 0.958333333 1.662757832 0.072916667 0.390625 0.59375 64 3 1 92 2R:13439765-13439869 7 60 781 FBgn0013765 2282.81 64.11 98.51 0.026283396 0.935891437 0.609075221 -7 -7 -7 0.2 dme-miR-307a-3p 7mer-A1 GTTGTGA 2R 13453361 13453367 + 2R_13453361_13453367_+ 0.518150304 0.446542735 0.482346519 0.05063422 cbs FBtr0087666|FBtr0309886|FBtr0309887 13453210|13453210|13453210 13453393|13453393|13453393 2R + 13453345 13453384 3'utr cbs FlyBase G15585.2 AGTATTTATTTCTACCGTTGTGATTTTTATAATAAACTAA 53 13453369 0.62152229 7 49 599 0.958333333 1.361727836 0 0.283018868 0.472222222 53 1 2 69 2R:13453345-13453384 7 cbs FBtr0309886|FBtr0309887|FBtr0087666 13453210|13453210|13453210 13453393|13453393|13453393 GTTGTGA 7mer-A1 dme-miR-307a-3p 2R + 13453345 13453385 3'utr cbs FlyBase G11826.1 AGTATTTATTTCTACCGTTGTGATTTTTATAATAAACTAAC 39 13453370 0.666561879 6 36 461 0.905660377 1.204119983 0 0.307692308 0.490566038 39 3 2 48 2R:13453345-13453385 7 45.5 782 FBgn0086757 496.6633333 26.83333333 41.18333333 0.091611353 1.695652174 1.104815864 -8 -9 -8.5 0.2 dme-miR-7-5p 6mer3-8 GTCTTC 2R 13453888 13453893 - 2R_13453888_13453893_- 0.69575633 0.999876313 0.847816321 0.215045314 arr FBtr0087702 13453638 13454435 2R - 13453874 13453929 3'utr arr FlyBase G22845.1 TGAAGCAATATTGACGAATATGCGACTAATTGAACTGTCTTCTTAATTGTTATAAA 8 13453910 0.974292148 5 7 50 1 0.954242509 0.444444444 0.125 0.222222222 8 0 0 9 2R:13453874-13453929 6 arr FBtr0087702 13453638 13454435 GTCTTC 6mer3-8 dme-miR-7-5p 2R - 13453843 13453920 3'utr arr FlyBase G17329.1 ATTGACGAATATGCGACTAATTGAACTGTCTTCTTAATTGTTATAAACACCAAAAAGTGCCTCATTAATACGTGTGTT 10 13453900 0.980594262 8 10 74 1 1.113943352 0.153846154 0.3 0.461538462 10 0 0 13 2R:13453843-13453920 6 4 783 FBgn0000119 295 5.866666667 8.943333333 0.013559322 0.681818182 0.447260529 17 7 12 0.2 dme-miR-14-3p 6mer2-7 AGACTG 2R 13454139 13454144 - 2R_13454139_13454144_- 0.676556112 0.613080401 0.644818257 0.044884098 arr FBtr0087702 13453638 13454435 2R - 13454039 13454302 3'utr arr FlyBase G22846.1 GAGTTTAATTGGTCATTTAAGGCTTTAACTAATTTTAATCATAGCTTAGAGAGAGCGTCCATGCCTGAAGGACTTATTCGATCTCGTTAAGTTTCATTTTGCCAGATAGCCCGAAATAGATTGCAGTACAATGCTTTGCAGCTACCATACGCAACAATAGACTGCAGATTATTAGCAATTACCTTAGGTATAAATGATGTAATATTCGATAGGTGAGACAGTCTTTTGAAATTCCGTGTGCCAAATTTTCCGAAACCTGACAGA 285 13454145 0.971995387 36 268 1709 0.9375 1.896250562 0.113095238 0.150877193 0.279761905 285 18 3 315 2R:13454039-13454302 6 arr FBtr0087702 13453638 13454435 AGACTG 6mer2-7 dme-miR-14-3p 2R - 13454118 13454316 3'utr arr FlyBase G17330.1 GTAAATATGTATGTGAGTTTAATTGGTCATTTAAGGCTTTAACTAATTTTAATCATAGCTTAGAGAGAGCGTCCATGCCTGAAGGACTTATTCGATCTCGTTAAGTTTCATTTTGCCAGATAGCCCGAAATAGATTGCAGTACAATGCTTTGCAGCTACCATACGCAACAATAGACTGCAGATTATTAGCAATTACCTT 178 13454145 0.973304798 24 166 1008 0.95 1.693726949 0.153846154 0.342696629 0.55 178 9 4 247 2R:13454118-13454316 6 79 784 FBgn0000119 295 5.866666667 8.943333333 0.26779661 13.46590909 8.833395453 1 1 1 0.2 dme-miR-283-5p 7mer-A1 GATATTA 2R 13495322 13495328 - 2R_13495322_13495328_- 0.722197829 0.726342821 0.724270325 0.002930958 drk FBtr0087696|FBtr0087697|FBtr0087698 13495220|13495220|13495220 13496977|13496977|13496977 2R - 13495316 13495355 3'utr drk FlyBase G22881.1 AATAAAGCAGGCAATTGACAAGGTTTAGATATTAACTAAC 38 13495331 0.937114394 3 38 233 1 1.662757832 0.130434783 0.131578947 0.282608696 38 0 0 46 2R:13495316-13495355 7 drk FBtr0087698|FBtr0087696|FBtr0087697 13495220|13495220|13495220 13496977|13496977|13496977 GATATTA 7mer-A1 dme-miR-283-5p 2R - 13495316 13495352 3'utr drk FlyBase G17359.1 AAAGCAGGCAATTGACAAGGTTTAGATATTAACTAAC 31 13495331 0.703441228 2 31 151 1 1.633468456 0.069767442 0.35483871 0.534883721 31 0 0 43 2R:13495316-13495352 7 34.5 785 FBgn0004638 2373.316667 149.8733333 229.7333333 0.014536619 0.230194386 0.150174115 3 3 3 0.2 dme-miR-980-3p 6mer3-8 GGCAGC 2R 13496891 13496896 - 2R_13496891_13496896_- 0.999998895 0.999999853 0.999999374 7.07E-07 drk FBtr0087695|FBtr0087696|FBtr0087697|FBtr0087694|FBtr0087698 13496439|13495220|13495220|13496764|13495220 13496977|13496977|13496977|13496977|13496977 2R - 13496866 13496923 3'utr drk FlyBase G22889.1 AAACACAACACACACCCATAACGATTAGGCAGCATTATCAGCAATTGCGAATAACAAC 40 13496898 0.946402215 7 38 166 0.955555556 1.633468456 0.022222222 0.1 0.2 40 2 0 43 2R:13496866-13496923 6 drk FBtr0087694|FBtr0087698|FBtr0087696|FBtr0087697|FBtr0087695 13496764|13495220|13495220|13495220|13496439 13496977|13496977|13496977|13496977|13496977 GGCAGC 6mer3-8 dme-miR-980-3p 2R - 13496868 13496919 3'utr drk FlyBase G17366.1 ACAACACACACCCATAACGATTAGGCAGCATTATCAGCAATTGCGAATAACA 27 13496898 0.941129823 6 27 127 1 1.662757832 0.065217391 0.555555556 0.739130435 27 0 0 46 2R:13496868-13496919 6 29.5 786 FBgn0004638 2373.316667 149.8733333 229.7333333 0.012429863 0.196832881 0.12840975 2 2 2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 13555501 13555506 + 2R_13555501_13555506_+ 0.670297786 0.77613969 0.723218738 0.074841525 Roe1 FBtr0087675|FBtr0087675|FBtr0087675 13555286|13555286|13555286 13555606|13555606|13555606 2R + 13555473 13555526 3'utr Roe1 FlyBase G15633.1 TTAGAATTCCTCCTAGTTTCTAAGAGATCTGTGACTGGATTTGATGGCCACAAT 370 13555502 0.792228521 11 348 3113 0.950236967 1.700054386 0.05450237 0.127027027 0.234597156 370 14 7 401 2R:13555473-13555526 6 Roe1 FBtr0087675|FBtr0087675|FBtr0087675 13555286|13555286|13555286 13555606|13555606|13555606 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 13555441 13555573 3'utr Roe1 FlyBase G11858.1 ACAAACGCATCCTTCGGGCAAAGCTTGCGAATTTAGAATTCCTCCTAGTTTCTAAGAGATCTGTGACTGGATTTGATGGCCACAATTTGTACCATACGCGTGGCCATCGAGTGTTCCACTTTAAGGTTTAATT 228 13555502 0.804102875 19 214 1796 0.943786982 2.202760687 0.062130178 0.355263158 0.565088757 228 18 1 319 2R:13555441-13555573 6 285.5 787 FBgn0014877 286 33.49333333 51.28666667 0.998251748 8.524084395 5.566748993 -1 -1 -1 0.2 dme-miR-317-5p 7mer-A1 TATCCCA 2R 13580425 13580431 - 2R_13580425_13580431_- 0.784136401 0.52124254 0.65268947 0.185894059 CG6191 FBtr0330617 13580311 13580990 2R - 13580388 13580433 3'utr CG6191 FlyBase G22913.1 TATATCCCAAAATTACCTTCGTCCCTGATTCCTAGACTCCTAAGTG 23 13580408 0.666205762 6 23 187 1 1.414973348 0 0.130434783 0.230769231 23 0 0 26 2R:13580388-13580433 7 CG6191 FBtr0330617 13580311 13580990 TATCCCA 7mer-A1 dme-miR-317-5p 2R - 13580388 13580436 3'utr CG6191 FlyBase G17389.1 GAGTATATCCCAAAATTACCTTCGTCCCTGATTCCTAGACTCCTAAGTG 14 13580408 0.668228211 4 13 115 0.904761905 1.278753601 0.047619048 0.357142857 0.571428571 14 2 0 19 2R:13580388-13580436 7 10.5 788 FBgn0027581 566.66 18.94333333 29.07333333 0.01852963 0.554284709 0.361155698 -23 -23 -23 0.2 dme-miR-252-5p 7mer-m8 GTACTTA 2R 13580891 13580897 - 2R_13580891_13580897_- 0.586987291 0.582795577 0.584891434 0.002963979 CG6191 FBtr0330617|FBtr0087678 13580311|13580584 13580990|13580990 2R - 13580885 13580924 stop_codon CG6191 FlyBase G22914.2 CGCAAGGGCAGTCGCAAGTAGGCGTTCGTACTTATAGCAT 34 13580900 0.775550217 7 24 205 0.789473684 1.176091259 0.210526316 0.117647059 0.210526316 34 7 1 30 2R:13580885-13580924 7 CG6191 FBtr0330617|FBtr0087678 13580311|13580584 13580990|13580990 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 13580868 13580922 stop_codon CG6191 FlyBase G17390.1 CAAGGGCAGTCGCAAGTAGGCGTTCGTACTTATAGCATACTTTCGGGTGTTGGGT 13 13580900 0.985075084 3 11 91 0.8 1.204119983 0 0.461538462 0.65 13 4 0 16 2R:13580868-13580922 7 22.5 789 FBgn0027581 566.66 18.94333333 29.07333333 0.039706349 1.187752947 0.773905068 3 3 3 0.2 dme-miR-932-5p 7mer-A1 GAATTGA 2R 13820064 13820070 - 2R_13820064_13820070_- 0.7810196 0.816546489 0.798783045 0.025121312 fl(2)d FBtr0304697|FBtr0304696|FBtr0087647|FBtr0087648 13819622|13819622|13819622|13819622 13820154|13820154|13820154|13820154 2R - 13820002 13820184 stop_codon fl(2)d FlyBase G22925.1 GGCAGCGGAGCAGTCGACTACTCCACCTAAGCGCTGGCGAACCTTTTTCCAAAAAAGGGTGCACTCCATATGAGTTCGTCAAATTGATCGTTAATTCCTGACGTTTACTTTTGTGAATTGAGATTTCAAAACAGAGAGAGACTTCATTTTATATTTCTAACCTATCTTTTAGATTCTTTAATT 65 13820067 0.982831166 25 62 470 0.95 1.579783597 0.325 0.215384615 0.3625 65 3 1 76 2R:13820002-13820184 7 fl(2)d FBtr0087647|FBtr0087648|FBtr0304697|FBtr0304696 13819622|13819622|13819622|13819622 13820154|13820154|13820154|13820154 GAATTGA 7mer-A1 dme-miR-932-5p 2R - 13820010 13820174 stop_codon fl(2)d FlyBase G17396.1 CAGTCGACTACTCCACCTAAGCGCTGGCGAACCTTTTTCCAAAAAAGGGTGCACTCCATATGAGTTCGTCAAATTGATCGTTAATTCCTGACGTTTACTTTTGTGAATTGAGATTTCAAAACAGAGAGAGACTTCATTTTATATTTCTAACCTATCTTTTAGATT 58 13820067 0.986484706 21 56 478 0.97826087 1.954242509 0.239130435 0.448275862 0.652173913 58 2 0 90 2R:13820010-13820174 7 29 790 FBgn0000662 1153.03 55.06666667 84.32666667 0.025151124 0.526634383 0.343900704 -3 -3 -3 0.2 dme-miR-305-5p 7mer-A1 GTACAAA 2R 13825535 13825541 + 2R_13825535_13825541_+ 0.565508085 0.780990588 0.673249336 0.152369137 CG13339 FBtr0087632 13825430 13825572 2R + 13825511 13825549 3'utr CG13339 FlyBase G15651.1 TAAATATCTAATATTAGGGCTGTTGTACAAATATGTAAA 13 13825533 0.695330293 6 13 100 1 1.146128036 0.5 0.076923077 0.142857143 13 0 0 14 2R:13825511-13825549 7 CG13339 FBtr0087632 13825430 13825572 GTACAAA 7mer-A1 dme-miR-305-5p 2R + 13825516 13825550 3'utr CG13339 FlyBase G11870.1 ATCTAATATTAGGGCTGTTGTACAAATATGTAAAT 15 13825533 0.622546621 6 15 98 1 1.462397998 0.724137931 0.6 0.793103448 15 0 0 29 2R:13825516-13825550 7 14 791 FBgn0033871 109.33 21.32666667 32.49 0.128052685 0.656455142 0.430901816 2 2 2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 13863458 13863463 + 2R_13863458_13863463_+ 0.813671523 0.527089719 0.670380621 0.202643934 CG13344 FBtr0087586|FBtr0087586|FBtr0087586|FBtr0339953|FBtr0339953|FBtr0339953 13863344|13863344|13863344|13863344|13863344|13863344 13864156|13864156|13864156|13863579|13863579|13863579 2R + 13863433 13863491 3'utr CG13344 FlyBase G15662.1 AGGTTTAGTTTTATGAGGCGCACTTCTGTGACTTTGTTTGTGTTCGTACGTTCGTATAT 54 13863467 0.814667431 10 53 463 0.984375 1.799340549 0.3125 0.166666667 0.296875 54 1 0 63 2R:13863433-13863491 6 CG13344 FBtr0339953|FBtr0339953|FBtr0339953|FBtr0087586|FBtr0087586|FBtr0087586 13863344|13863344|13863344|13863344|13863344|13863344 13863579|13863579|13863579|13864156|13864156|13864156 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 13863439 13863489 3'utr CG13344 FlyBase G11878.1 AGTTTTATGAGGCGCACTTCTGTGACTTTGTTTGTGTTCGTACGTTCGTAT 37 13863467 0.615195605 9 33 319 0.886792453 1.194976603 0.339622642 0.378378378 0.566037736 37 4 2 47 2R:13863439-13863489 6 26 792 FBgn0033884 128.6733333 8.203333333 12.55333333 0.202062069 3.169443316 2.071163038 -9 -9 -9 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 13863471 13863477 + 2R_13863471_13863477_+ 0.405113571 0.434030701 0.419572136 0.020447478 CG13344 FBtr0087586|FBtr0339953 13863344|13863344 13864156|13863579 2R + 13863433 13863491 3'utr CG13344 FlyBase G15662.1 AGGTTTAGTTTTATGAGGCGCACTTCTGTGACTTTGTTTGTGTTCGTACGTTCGTATAT 54 13863467 0.814667431 10 53 463 0.984375 1.799340549 0.3125 0.166666667 0.296875 54 1 0 63 2R:13863433-13863491 7 CG13344 FBtr0339953|FBtr0087586 13863344|13863344 13863579|13864156 TGTGTTC 7mer-m8 dme-miR-317-3p 2R + 13863439 13863489 3'utr CG13344 FlyBase G11878.1 AGTTTTATGAGGCGCACTTCTGTGACTTTGTTTGTGTTCGTACGTTCGTAT 37 13863467 0.615195605 9 33 319 0.886792453 1.194976603 0.339622642 0.378378378 0.566037736 37 4 2 47 2R:13863439-13863489 7 4 793 FBgn0033884 128.6733333 8.203333333 12.55333333 0.031086472 0.487606664 0.318640467 4 4 4 0.2 dme-miR-980-3p 6mer3-8 GGCAGC 2R 13863699 13863704 + 2R_13863699_13863704_+ 0.618581262 0.629634002 0.624107632 0.007815439 CG13344 FBtr0087586 13863344 13864156 2R + 13863682 13863716 3'utr CG13344 FlyBase G15664.1 ATTTAGGAGCACCAACTGGCAGCGCTGGCGTTGAC 10 13863698 0.947115154 2 10 21 1 1.041392685 0.363636364 0.1 0.181818182 10 0 0 11 2R:13863682-13863716 6 CG13344 FBtr0087586 13863344 13864156 GGCAGC 6mer3-8 dme-miR-980-3p 2R + 13863667 13863716 3'utr CG13344 FlyBase G11880.1 AGAGCAGCAGCATGTATTTAGGAGCACCAACTGGCAGCGCTGGCGTTGAC 7 13863698 0.999181601 2 6 22 1 1.041392685 0.363636364 0.571428571 0.727272727 7 0 0 11 2R:13863667-13863716 6 8 794 FBgn0033884 128.6733333 8.203333333 12.55333333 0.062172944 0.975213328 0.637280935 1 1 1 0.2 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2R 13863903 13863910 + 2R_13863903_13863910_+ 0.629555201 0.629743827 0.629649514 0.00013336 CG13344 FBtr0087586 13863344 13864156 2R + 13863815 13863940 3'utr CG13344 FlyBase G15665.1 AACCCCCTCTGGCAGCCCATAGCACAAAGAAACGTATGAACCCAGCTTGTACTTGAGTTAGTTGGATGATTAAAGTTGAAGCGGCATTTCTAGTCAGTAAATGGTGGTCAGAATAGAGGGAACGTA 137 13863902 0.977503484 11 134 886 0.9625 2.187520721 0.0875 0.145985401 0.26875 137 6 0 154 2R:13863815-13863940 8 CG13344 FBtr0087586 13863344 13864156 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R + 13863886 13863980 3'utr CG13344 FlyBase G11881.1 AAAGTTGAAGCGGCATTTCTAGTCAGTAAATGGTGGTCAGAATAGAGGGAACGTAGAAGGAGGAGGAGGAGGAGGAGTAACCCCGATACAGGGCA 70 13863902 0.972006182 8 66 393 0.97 1.685741739 0.2 0.371428571 0.56 70 2 1 97 2R:13863886-13863980 8 97 795 FBgn0033884 128.6733333 8.203333333 12.55333333 0.753846951 11.8244616 7.727031333 1 1 1 0.2 dme-bantam-3p 6mer3-8 TGATCT 2R 13943680 13943685 - 2R_13943680_13943685_- 0.90119524 0.914421182 0.907808211 0.009352194 AGO1 FBtr0305592 13943385 13947971 2R - 13943618 13943697 3'utr AGO1 FlyBase G23018.1 AATGAAAGTTGATGATCTTTTCGATATAATTCTGTCAAGCTGTCTTAACAATTAGTTATAAGCGCTTCAATACAAGAAAC 20 13943678 0.855237785 8 20 165 1 1.414973348 0.115384615 0.15 0.346153846 20 0 0 26 2R:13943618-13943697 6 AGO1 FBtr0305592 13943385 13947971 TGATCT 6mer3-8 dme-bantam-3p 2R - 13943619 13943727 3'utr AGO1 FlyBase G17447.1 CAAAATGCGAGTTTGTGAAATATGCAATTTAATGAAAGTTGATGATCTTTTCGATATAATTCTGTCAAGCTGTCTTAACAATTAGTTATAAGCGCTTCAATACAAGAAA 16 13943679 0.985238221 7 14 124 0.923076923 1.380211242 0.192307692 0.3125 0.576923077 16 2 0 24 2R:13943619-13943727 6 10.5 796 FBgn0262739 6339.806667 111.4333333 171.8633333 0.001656202 0.094226742 0.061095056 -7 -6 -6.5 0.2 dme-bantam-3p 6mer3-8 TGATCT 2R 13943883 13943888 - 2R_13943883_13943888_- 0.999997663 0.995166344 0.997582004 0.003416316 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 2R - 13943866 13943930 3'utr AGO1 FlyBase G23020.1 AAGCAACGTGAGCAACGTAATATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGT 37 13943890 0.86445956 12 34 389 0.886363636 1.591064607 0.159090909 0.162162162 0.295454545 37 5 0 39 2R:13943866-13943930 6 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 TGATCT 6mer3-8 dme-bantam-3p 2R - 13943864 13943921 3'utr AGO1 FlyBase G17448.1 GAGCAACGTAATATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTAA 27 13943890 0.987717694 10 26 285 0.975 1.591064607 0.25 0.296296296 0.525 27 1 0 39 2R:13943864-13943921 6 29 797 FBgn0262739 6339.806667 111.4333333 171.8633333 0.004574272 0.260245289 0.168738727 2 2 2 0.2 dme-miR-305-3p 8mer-m1 ATGTGCCG 2R 13944588 13944595 - 2R_13944588_13944595_- 0.628727824 0.628654443 0.628691133 5.19E-05 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 2R - 13944563 13944608 3'utr AGO1 FlyBase G23026.1 ATATTACTTATAAATGTGCCGTTTATAGATGTCTACAATTATATAC 17 13944593 0.738681045 6 16 164 1 1.255272505 0 0.058823529 0.111111111 17 0 0 18 2R:13944563-13944608 8 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 ATGTGCCG 8mer-m1 dme-miR-305-3p 2R - 13944560 13944605 3'utr AGO1 FlyBase G17453.1 TTACTTATAAATGTGCCGTTTATAGATGTCTACAATTATATACAAC 6 13944584 0.982702537 4 6 52 1 1 0.3 0.5 0.7 6 0 0 10 2R:13944560-13944605 8 9.5 798 FBgn0262739 6339.806667 111.4333333 171.8633333 0.001498468 0.085252767 0.055276479 -2 -11 -6.5 0.2 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 13944733 13944739 - 2R_13944733_13944739_- 0.801994621 0.803310373 0.802652497 0.000930411 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 2R - 13944714 13944832 3'utr AGO1 FlyBase G23027.1 TATGTTCTGCTCAGAGGCAAGGCCCAAATAAAAAGACAAAAAGCCGGGATATCCAAATGGGAACTTACATTTTTATCTGTCAAAATTCAATTGAGCTTTAAACTAAAGATAGATCGAGA 158 13944741 0.976271152 12 150 963 0.945054945 2.235528447 0.027472527 0.120253165 0.236263736 158 10 0 172 2R:13944714-13944832 7 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 AGCTTTA 7mer-A1 dme-miR-79-3p 2R - 13944708 13944758 3'utr AGO1 FlyBase G17454.1 ATCTGTCAAAATTCAATTGAGCTTTAAACTAAAGATAGATCGAGAAAAAAC 52 13944741 0.805553155 3 49 371 0.927536232 1.806179974 0 0.288461538 0.463768116 52 5 0 64 2R:13944708-13944758 7 79.5 799 FBgn0262739 6339.806667 111.4333333 171.8633333 0.012539815 0.71343105 0.462576854 2 2 2 0.2 dme-miR-33-5p 6mer2-7 AATGCA 2R 13945225 13945230 - 2R_13945225_13945230_- 0.605122394 0.558478199 0.581800296 0.03298243 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 2R - 13945180 13945275 3'utr AGO1 FlyBase G23029.1 ATATTCACTTAGTTTAAGCTGAAGCTGAAATGTGTGCCGACAATGAATGCATCTCGTAGTTGTAAAATGAGCGAAATATTCAACAATAATTTACTT 414 13945228 0.983198604 15 401 3155 0.974248927 2.356025857 0.278969957 0.111111111 0.210300429 414 11 1 454 2R:13945180-13945275 6 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 AATGCA 6mer2-7 dme-miR-33-5p 2R - 13945201 13945340 3'utr AGO1 FlyBase G17457.1 AAAGGAGTTCGCGATTCGGGGCTCGATTTTTGAGATCGGCCAGAAAGAACCAACATTTACATTATATATTCACTTAGTTTAAGCTGAAGCTGAAATGTGTGCCGACAATGAATGCATCTCGTAGTTGTAAAATGAGCGAA 180 13945228 0.983135224 15 171 1306 0.954385965 2.133538908 0.242105263 0.388888889 0.614035088 180 12 1 272 2R:13945201-13945340 6 276.5 800 FBgn0262739 6339.806667 111.4333333 171.8633333 0.043613317 2.481304218 1.608836479 -2 -2 -2 0.2 dme-miR-1003-3p 7mer-m8 ATGTGAG 2R 13946084 13946090 - 2R_13946084_13946090_- 0.671677274 0.671687002 0.671682138 6.86E-06 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 2R - 13945974 13946162 3'utr AGO1 FlyBase G23034.1 CATCCTTCTTCACAGAACCTTTAATTTAGATTTAGTTTCCAAGTTTGCAAGCTGTTTTGCCAATCGTACATTATGTGAGCATTATAAAATACATAATATATATAAATCTATATGCTTATATTTAATCATTTACTGCACTTACAAATTAGTTGGTAATCCTCAAGAATATATGTATAAAGAAAAAAAGGG 88 13946090 0.940822388 37 76 698 0.900990099 1.356981401 0.108910891 0.125 0.237623762 88 7 3 91 2R:13945974-13946162 7 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 ATGTGAG 7mer-m8 dme-miR-1003-3p 2R - 13945981 13946170 3'utr AGO1 FlyBase G17459.1 ATTGTATACATCCTTCTTCACAGAACCTTTAATTTAGATTTAGTTTCCAAGTTTGCAAGCTGTTTTGCCAATCGTACATTATGTGAGCATTATAAAATACATAATATATATAAATCTATATGCTTATATTTAATCATTTACTGCACTTACAAATTAGTTGGTAATCCTCAAGAATATATGTATAAAGAAA 62 13946106 0.984202686 24 56 504 0.904255319 1.452297671 0.042553191 0.338709677 0.563829787 62 7 2 85 2R:13945981-13946170 7 19 801 FBgn0262739 6339.806667 111.4333333 171.8633333 0.002996937 0.170505534 0.110552959 0 16 8 0.2 dme-miR-999-3p 8mer-A1 AGTTAACA 2R 13946251 13946258 - 2R_13946251_13946258_- 0.641010816 0.64392623 0.642468523 0.002061499 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 2R - 13946182 13946304 3'utr AGO1 FlyBase G23034.2 ATGAAACGTATGCTTAGTAATTGTACTATATCGAGGACACAGTTCAAGTTAACATTATAATGAGTTGTTATTTATGCGGCGCGGGCGACGACGTTCTATCCACTCGGAATCGCCCGGGCCAAA 56 13946257 0.870147467 19 48 301 0.919354839 1.755874856 0.290322581 0.071428571 0.161290323 56 5 0 57 2R:13946182-13946304 8 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 AGTTAACA 8mer-A1 dme-miR-999-3p 2R - 13946214 13946293 3'utr AGO1 FlyBase G17460.1 GCTTAGTAATTGTACTATATCGAGGACACAGTTCAAGTTAACATTATAATGAGTTGTTATTTATGCGGCGCGGGCGACGA 39 13946255 0.98507182 11 29 236 0.745454545 0.913813852 0.418181818 0.358974359 0.545454545 39 10 4 41 2R:13946214-13946293 8 26 802 FBgn0262739 6339.806667 111.4333333 171.8633333 0.004101071 0.233323362 0.151282996 -1 -3 -2 0.2 dme-miR-283-5p 8mer-m1 TGATATTT 2R 13946734 13946741 - 2R_13946734_13946741_- 0.476083169 0.437134774 0.456608971 0.027540678 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 2R - 13946560 13946840 3'utr AGO1 FlyBase G23036.1 GAAACGATAACCAAGCGGATGGAGCTGTTGTAACAATGTAGATTACTTAAATTCAAAAGTGCAAATAACACGGTAGCAGACACGTTACGTTGGCAGTGCTGATATTTTATGTTAGTCCTTAGTTTACCCTCTTTTATGCACCACACCACCACACAATCAGACTCCGAACTTCTTCAACCCTCCTCGAGTCCAAGGCATATCACTCAATGTCCTCTTATTTATGTACCTCCTACAATAAGCCTTATGATATATTTAGTTGTACCTTATATATATATATATAT 345 13946744 0.942663734 53 306 2742 0.898383372 1.744851561 0.113163972 0.208695652 0.369515012 345 38 6 389 2R:13946560-13946840 8 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 TGATATTT 8mer-m1 dme-miR-283-5p 2R - 13946724 13946835 3'utr AGO1 FlyBase G17461.3 GATAACCAAGCGGATGGAGCTGTTGTAACAATGTAGATTACTTAAATTCAAAAGTGCAAATAACACGGTAGCAGACACGTTACGTTGGCAGTGCTGATATTTTATGTTAGTC 142 13946744 0.986197784 19 113 1058 0.795454545 1.765916794 0.195454545 0.408450704 0.618181818 142 43 2 175 2R:13946724-13946835 8 144.5 803 FBgn0262739 6339.806667 111.4333333 171.8633333 0.022792493 1.296739456 0.840784344 3 3 3 0.2 dme-miR-988-3p 8mer-A1 ACAAGGGA 2R 13946936 13946943 - 2R_13946936_13946943_- 0.565513926 0.600557928 0.583035927 0.02477985 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 2R - 13946860 13947264 3'utr AGO1 FlyBase G23037.1 ACAGCAAACACCACATGAACACCAACCACTCGGATTCTCTGTACTGTGAACGAAGACCACCACCAAAATATAAACAAAAACCACAAGCGACATTAAAGCGACAAGCATTGAAAGAGTGTGTAGACACAACTTAGCATGTACTAATGAATTACTTCAATACTTCAACTAGGGCGCTGACAAAACCAAGCAAGAACATTTAATAGTTTGTAAGTTGGGCTCTACCAAAAACCGAACACAAAATGAGAGAGAGAGAGAGAGAGAAAAATGCAAGCAAGGCCAGATAAGTTAAGTGGGCAATGAATAACGAGAACTGCAATTTCAACAAGGGACAAACTTTTGGTCAAAACAATAGCTATACTTATAGAGCAGAGCCTAATATATACATACATAATTAGAATCTAAAAC 268 13946947 0.999995042 55 250 1217 0.938110749 1.681241237 0.182410423 0.130597015 0.241042345 268 14 5 288 2R:13946860-13947264 8 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 ACAAGGGA 8mer-A1 dme-miR-988-3p 2R - 13946845 13947073 3'utr AGO1 FlyBase G17462.1 AACATTTAATAGTTTGTAAGTTGGGCTCTACCAAAAACCGAACACAAAATGAGAGAGAGAGAGAGAGAGAAAAATGCAAGCAAGGCCAGATAAGTTAAGTGGGCAATGAATAACGAGAACTGCAATTTCAACAAGGGACAAACTTTTGGTCAAAACAATAGCTATACTTATAGAGCAGAGCCTAATATATACATACATAATTAGAATCTAAAACTAAAATTTAAAGTTT 142 13946947 0.947976752 26 132 504 0.932126697 1.614897216 0.221719457 0.401408451 0.615384615 142 11 4 206 2R:13946845-13947073 8 56 804 FBgn0262739 6339.806667 111.4333333 171.8633333 0.008833077 0.502542626 0.325840299 4 4 4 0.2 dme-miR-14-3p 6mer3-8 AAGACT 2R 13973086 13973091 - 2R_13973086_13973091_- 0.55370632 0.67717779 0.615442055 0.087307535 CG6701 FBtr0339957|FBtr0303991|FBtr0303990|FBtr0303989 13972982|13972982|13972982|13972982 13973652|13973652|13973652|13973652 2R - 13973033 13973129 3'utr CG6701 FlyBase G23078.1 AAGTAAAAACTTGCTGACTCCTTGTGTCATCGGTTCTGAAGACTTGAAACAATTTGACAATGTAGAAAACAATATGTATATGCCCGACAAACTATTT 24 13973093 0.975000055 11 23 150 1 1.505149978 0.15625 0.291666667 0.46875 24 0 0 32 2R:13973033-13973129 6 CG6701 FBtr0303990|FBtr0303989|FBtr0339957|FBtr0303991 13972982|13972982|13972982|13972982 13973652|13973652|13973652|13973652 AAGACT 6mer3-8 dme-miR-14-3p 2R - 13973080 13973107 3'utr CG6701 FlyBase G17496.1 TGTGTCATCGGTTCTGAAGACTTGAAAC 5 13973093 0.794693685 2 5 35 1 0.84509804 0.428571429 0.4 0.571428571 5 0 0 7 2R:13973080-13973107 6 10 805 FBgn0033889 5221.26 120.4433333 183.47 0.001915247 0.083026596 0.054504824 2 2 2 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 2R 13973565 13973570 - 2R_13973565_13973570_- 0.534679314 0.498194573 0.516436944 0.025798579 CG6701 FBtr0339957|FBtr0303991|FBtr0303990|FBtr0303989 13972982|13972982|13972982|13972982 13973652|13973652|13973652|13973652 2R - 13973514 13973623 3'utr CG6701 FlyBase G23080.1 CTATAGGGACAACGTGATTGCTTGGCCGAACAAGTGATCTCGCTGTCCTCTTTTTGACTTTGCTATTGGCATTTGTGCGATCTGCGATCATCCATGCGCCAAGTAGCAAA 35 13973589 0.985100945 13 33 265 0.930232558 1.602059991 0.139534884 0.228571429 0.372093023 35 3 0 40 2R:13973514-13973623 6 CG6701 FBtr0303990|FBtr0303989|FBtr0339957|FBtr0303991 13972982|13972982|13972982|13972982 13973652|13973652|13973652|13973652 TTGACT 6mer3-8 dme-miR-1012-3p 2R - 13973552 13973622 3'utr CG6701 FlyBase G17500.1 TATAGGGACAACGTGATTGCTTGGCCGAACAAGTGATCTCGCTGTCCTCTTTTTGACTTTGCTATTGGCAT 22 13973563 0.874786682 6 19 149 0.870967742 1.431363764 0.032258065 0.318181818 0.516129032 22 4 0 27 2R:13973552-13973622 6 8.5 806 FBgn0033889 5221.26 120.4433333 183.47 0.00162796 0.070572607 0.0463291 19 -7 6 0.2 dme-miR-33-5p 7mer-A1 AATGCAA 2R 13985083 13985089 - 2R_13985083_13985089_- 0.782897333 0.782910636 0.782903985 9.40E-06 RN-tre FBtr0087603|FBtr0330626|FBtr0330627 13984813|13984813|13984813 13985779|13985779|13985596 2R - 13985051 13985134 3'utr RN-tre FlyBase G23115.1 GTACCAAACAAAATACAAAGCAACGTTAAAAAGTTACGTCCATGAAATGCAAACGAATGTAAAGGCGAAAGGCAACCAAATATT 45 13985101 0.960432982 8 42 207 0.941176471 1.681241237 0.176470588 0.133333333 0.235294118 45 3 0 48 2R:13985051-13985134 7 RN-tre FBtr0330626|FBtr0330627|FBtr0087603 13984813|13984813|13984813 13985779|13985596|13985779 AATGCAA 7mer-A1 dme-miR-33-5p 2R - 13985031 13985121 3'utr RN-tre FlyBase G17524.1 TACAAAGCAACGTTAAAAAGTTACGTCCATGAAATGCAAACGAATGTAAAGGCGAAAGGCAACCAAATATTAATTGAAAACTATAGATAAC 35 13985101 0.957442506 7 35 166 1 1.748188027 0.25 0.514285714 0.696428571 35 0 0 56 2R:13985031-13985121 7 29 807 FBgn0020620 1475.656667 67.63 103.75 0.019652268 0.428803785 0.279518072 12 12 12 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 13986572 13986579 - 2R_13986572_13986579_- 0.507218911 0.45733186 0.482275386 0.035275436 RN-tre FBtr0087605 13986424 13987040 2R - 13986531 13986622 3'utr RN-tre FlyBase G23118.1 TACTAGCATAAACCAACTGATTAGGTAACTTAAGCTTTGCTCTTGCATTTACTTTATATTTGCATTACAAACAAAACTCAACTTTTAGTTTA 24 13986580 0.869135622 11 24 204 1 1.462397998 0.068965517 0.208333333 0.344827586 24 0 0 29 2R:13986531-13986622 8 RN-tre FBtr0087605 13986424 13987040 TGCATTTA 8mer-A1 dme-miR-277-3p 2R - 13986566 13986621 3'utr RN-tre FlyBase G17529.1 ACTAGCATAAACCAACTGATTAGGTAACTTAAGCTTTGCTCTTGCATTTACTTTAT 23 13986580 0.952413798 6 21 211 0.896551724 1.414973348 0.103448276 0.260869565 0.413793103 23 3 0 26 2R:13986566-13986621 8 13.5 808 FBgn0020620 1475.656667 67.63 103.75 0.009148469 0.199615555 0.130120482 1 1 1 0.2 dme-miR-252-5p 8mer-m1 GTACTTAG 2R 13986882 13986889 - 2R_13986882_13986889_- 0.611419562 0.621871559 0.616645561 0.00739068 RN-tre FBtr0087605 13986424 13987040 2R - 13986850 13986910 3'utr RN-tre FlyBase G23120.1 ATTCGGTAGTAATATCCACATGTACTTAGCTTTAATTTTTGTATTGTCGAACCGACAGAAA 13 13986889 0.989089527 4 13 123 1 1.255272505 0 0.230769231 0.444444444 13 0 0 18 2R:13986850-13986910 8 RN-tre FBtr0087605 13986424 13987040 GTACTTAG 8mer-m1 dme-miR-252-5p 2R - 13986843 13986909 3'utr RN-tre FlyBase G17530.1 TTCGGTAGTAATATCCACATGTACTTAGCTTTAATTTTTGTATTGTCGAACCGACAGAAACCTGAAA 10 13986890 0.98649581 3 10 90 1 1.176091259 0 0.4 0.6 10 0 0 15 2R:13986843-13986909 8 11 809 FBgn0020620 1475.656667 67.63 103.75 0.007454308 0.162649712 0.106024096 0 1 0.5 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 14058480 14058487 + 2R_14058480_14058487_+ 0.49917936 0.499268631 0.499223995 6.31E-05 mam FBtr0339956|FBtr0087597|FBtr0087596 14057913|14057913|14057913 14060356|14060356|14058697 2R + 14058442 14058492 3'utr mam FlyBase G15706.1 TACAGATACTACAGACTCGTTGTGCAACTTAAGCACTTGTACTTAATGCAA 12 14058479 0.982339257 4 12 91 1 1.079181246 0.083333333 0 0 12 0 0 12 2R:14058442-14058492 8 mam FBtr0087596|FBtr0339956|FBtr0087597 14057913|14057913|14057913 14058697|14060356|14060356 GTACTTAA 8mer-A1 dme-miR-252-5p 2R + 14058442 14058492 3'utr mam FlyBase G11914.1 TACAGATACTACAGACTCGTTGTGCAACTTAAGCACTTGTACTTAATGCAA 7 14058479 0.980313255 3 7 52 1 1 0 0.285714286 0.5 7 0 0 10 2R:14058442-14058492 8 8 810 FBgn0002643 1627.19 27.33666667 41.79333333 0.004916451 0.292647238 0.191418089 1 1 1 0.2 dme-miR-33-5p 7mer-A1 AATGCAA 2R 14060560 14060566 - 2R_14060560_14060566_- 0.775442433 0.782606888 0.779024661 0.005066067 Prosap FBtr0339764 14060454 14062325 2R - 14060499 14060593 3'utr Prosap FlyBase G23139.1 AGCACACACCACCACACATACACTTTAAATGCAAGTATTTCAAATGGAATAATACGGAAATATATATCATAAGTCGTAAAATATGCAATTATGTA 11 14060575 0.974862043 8 11 61 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 2R:14060499-14060593 7 Prosap FBtr0339764 14060454 14062325 AATGCAA 7mer-A1 dme-miR-33-5p 2R - 14060535 14060578 3'utr Prosap FlyBase G17542.1 ACATACACTTTAAATGCAAGTATTTCAAATGGAATAATACGGAA 5 14060568 0.966030999 3 5 27 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2R:14060535-14060578 7 4.5 811 FBgn0040752 4396.62 61.27 94.33 0.001023514 0.073445406 0.047704866 9 2 5.5 0.2 dme-miR-12-5p 6mer2-7 ATACTC 2R 14060911 14060916 - 2R_14060911_14060916_- 0.998563414 0.945068875 0.971816145 0.037826324 Prosap FBtr0339764 14060454 14062325 2R - 14060860 14060930 3'utr Prosap FlyBase G23141.1 CGAGAATATATTGGATACTCTAGCGTATAACTAGATTTTAGCACACTTTTTAGTTCTCGCAATAGTTGCTA 12 14060920 0.633801613 7 11 99 0.923076923 1.079181246 0.076923077 0.083333333 0.153846154 12 1 0 12 2R:14060860-14060930 6 Prosap FBtr0339764 14060454 14062325 ATACTC 6mer2-7 dme-miR-12-5p 2R - 14060847 14060930 3'utr Prosap FlyBase G17544.1 CGAGAATATATTGGATACTCTAGCGTATAACTAGATTTTAGCACACTTTTTAGTTCTCGCAATAGTTGCTAATTATTTGTAAAT 19 14060920 0.787895924 9 17 143 0.958333333 1.361727836 0.5 0.263157895 0.416666667 19 1 0 23 2R:14060847-14060930 6 8.5 812 FBgn0040752 4396.62 61.27 94.33 0.001933303 0.138730211 0.090109191 4 4 4 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 14062073 14062079 - 2R_14062073_14062079_- 0.751772475 0.743022977 0.747397726 0.006186831 Prosap FBtr0339765|FBtr0339765|FBtr0339765|FBtr0339763|FBtr0339763|FBtr0339763|FBtr0087601|FBtr0087601|FBtr0087601|FBtr0339764|FBtr0339764|FBtr0339764 14061497|14061497|14061497|14061497|14061497|14061497|14061497|14061497|14061497|14060454|14060454|14060454 14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325 2R - 14062041 14062100 3'utr Prosap FlyBase G23151.1 ACTTTTATTATATTTATTGCGTGTGATATAAATTTATGCAAGCTGCCCGCGAGCAGCAAC 131 14062086 0.992824521 11 122 1457 0.91875 1.565257343 0.05 0.20610687 0.35 131 10 3 147 2R:14062041-14062100 7 Prosap FBtr0087601|FBtr0087601|FBtr0087601|FBtr0339764|FBtr0339764|FBtr0339764|FBtr0339765|FBtr0339765|FBtr0339765|FBtr0339763|FBtr0339763|FBtr0339763 14061497|14061497|14061497|14060454|14060454|14060454|14061497|14061497|14061497|14061497|14061497|14061497 14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 14062040 14062135 3'utr Prosap FlyBase G17553.1 GAATTAGAATTTTCTTGATTTCGAAATCTTAAGTTACTTTTATTATATTTATTGCGTGTGATATAAATTTATGCAAGCTGCCCGCGAGCAGCAACT 95 14062086 0.992747966 14 87 1022 0.905109489 2.093421685 0.051094891 0.336842105 0.540145985 95 13 0 124 2R:14062040-14062135 7 105 813 FBgn0040752 4396.62 61.27 94.33 0.023881982 1.71372613 1.113113538 7 7 7 0.2 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 14166705 14166712 + 2R_14166705_14166712_+ 0.605571961 0.604558227 0.605065094 0.000716865 CG8323 FBtr0087521 14166669 14166991 2R + 14166653 14166715 stop_codon CG8323 FlyBase G15738.1 AAGTATAGTAATCAATGACCCCAAAGATCACTGGCTAGGTAGCATTAATTTAAGTACAAAATT 5 14166702 0.987759734 4 5 34 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2R:14166653-14166715 8 CG8323 FBtr0087521 14166669 14166991 AGTACAAA 8mer-A1 dme-miR-305-5p 2R + 14166675 14166718 3'utr CG8323 FlyBase G11935.1 AAAGATCACTGGCTAGGTAGCATTAATTTAAGTACAAAATTGTT 6 14166702 0.984168723 3 6 53 1 0.954242509 0 0.5 0.666666667 6 0 0 9 2R:14166675-14166718 8 4 814 FBgn0033903 176.6666667 14.75333333 22.46333333 0.022641509 0.271125169 0.178067963 3 3 3 0.2 dme-miR-305-3p 6mer2-7 TGTGCC 2R 14166907 14166912 + 2R_14166907_14166912_+ 0.846521382 0.879153809 0.862837596 0.023074591 CG8323 FBtr0087521 14166669 14166991 2R + 14166895 14166950 3'utr CG8323 FlyBase G15741.1 CCAGAACCAACTTGTGCCTTCATTAAGCTAATTTAAGAGCTCTTCCTGTAGCCATT 23 14166907 0.847413638 7 22 172 0.961538462 1.096910013 0.038461538 0.130434783 0.230769231 23 0 1 25 2R:14166895-14166950 6 CG8323 FBtr0087521 14166669 14166991 TGTGCC 6mer2-7 dme-miR-305-3p 2R + 14166859 14166948 3'utr CG8323 FlyBase G11936.1 AATGTCCTAGTTCCAATCTCTTAGATTAGCAAAGCCCCAGAACCAACTTGTGCCTTCATTAAGCTAATTTAAGAGCTCTTCCTGTAGCCA 20 14166907 0.822705524 7 17 146 0.931034483 1.130333768 0.172413793 0.35 0.551724138 20 1 1 27 2R:14166859-14166948 6 12.5 815 FBgn0033903 176.6666667 14.75333333 22.46333333 0.070754717 0.847266155 0.556462383 0 0 0 0.2 dme-miR-13b-2-5p 7mer-A1 TTGACGA 2R 14181915 14181921 + 2R_14181915_14181921_+ 0.501186439 0.77920281 0.640194624 0.196587282 cg FBtr0339961|FBtr0290035|FBtr0112795|FBtr0346946 14181377|14181377|14180447|14180447 14182838|14182838|14182838|14182838 2R + 14181876 14181959 3'utr cg FlyBase G15768.1 ATGCCTAAGTGTAAACTGTATACATATTAACATGAAACATTGACGACTACGGATAGTACTAGACACTAGCATGCGTTGCACTTG 23 14181935 0.971449635 9 21 124 0.92 1.06069784 0.28 0.086956522 0.16 23 1 1 23 2R:14181876-14181959 7 cg FBtr0112795|FBtr0346946|FBtr0339961|FBtr0290035 14180447|14180447|14181377|14181377 14182838|14182838|14182838|14182838 TTGACGA 7mer-A1 dme-miR-13b-2-5p 2R + 14181783 14181958 3'utr cg FlyBase G11959.1 TAAAGCGTTACGTTCAATTGGTTTTACGCATTACACGATTTTTAATAACACAACTTATACACAAACTTATATTCAAATAGACGAAAAATATTTATGCCTAAGTGTAAACTGTATACATATTAACATGAAACATTGACGACTACGGATAGTACTAGACACTAGCATGCGTTGCACTT 25 14181934 0.972757612 14 23 149 0.925 1.091080469 0.275 0.44 0.65 25 1 2 37 2R:14181783-14181958 7 9.5 816 FBgn0000289 2715.146667 76.72333333 117.4833333 0.00349889 0.123821523 0.080862534 -20 -19 -19.5 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 14215232 14215239 - 2R_14215232_14215239_- 0.49243486 0.496059909 0.494247384 0.002563262 RpS23 FBtr0087575 14215094 14215434 2R - 14215216 14215280 3'utr RpS23 FlyBase G23204.1 GAATATAGTGATTCCAATCGATTCTGTTTTATAAGGCCGATGTACTTAATGAGTTACATACTTGC 48 14215240 0.984389598 9 44 342 0.909090909 1.397940009 0.2 0.145833333 0.254545455 48 4 1 50 2R:14215216-14215280 8 RpS23 FBtr0087575 14215094 14215434 GTACTTAA 8mer-A1 dme-miR-252-5p 2R - 14215184 14215267 3'utr RpS23 FlyBase G17590.1 CCAATCGATTCTGTTTTATAAGGCCGATGTACTTAATGAGTTACATACTTGCATATTTAAACTATAACAGTTTACAGTTTTCGT 30 14215240 0.988945282 7 26 246 0.82 1.135662602 0.16 0.466666667 0.68 30 7 2 41 2R:14215184-14215267 8 37 817 FBgn0033912 13740.81 3287.363333 4993.36 0.002692709 0.011255221 0.00740984 1 1 1 0.2 dme-miR-2b-2-5p 6mer2-7 TGAAGA 2R 14229591 14229596 + 2R_14229591_14229596_+ 0.99999664 0.973048464 0.986522552 0.019055184 CG8468 FBtr0087533|FBtr0087534|FBtr0087532 14229566|14229566|14229566 14230620|14230620|14230620 2R + 14229537 14229613 stop_codon CG8468 FlyBase G15802.1 CGAGAAGCTAACACCCCTGCCGGCGGCCTAAGGAGCTGCTTGGATCGGAGCGAATGAAGACATGCCAGACAGCCTGA 21 14229591 0.80576175 8 19 40 0.904761905 1.278753601 0.333333333 0 0 21 2 0 19 2R:14229537-14229613 6 CG8468 FBtr0087532|FBtr0087533|FBtr0087534 14229566|14229566|14229566 14230620|14230620|14230620 TGAAGA 6mer2-7 dme-miR-2b-2-5p 2R + 14229536 14229609 stop_codon CG8468 FlyBase G11989.1 ACGAGAAGCTAACACCCCTGCCGGCGGCCTAAGGAGCTGCTTGGATCGGAGCGAATGAAGACATGCCAGACAGC 16 14229591 0.991188258 6 15 31 0.956521739 1.342422681 0.47826087 0.375 0.565217391 16 1 0 22 2R:14229536-14229609 6 12 818 FBgn0033913 3375.036667 105.6 161.63 0.003555517 0.113636364 0.074243643 0 0 0 0.2 dme-miR-184-5p 7mer-A1 GATAAGA 2R 14229765 14229771 + 2R_14229765_14229771_+ 0.780381545 0.780034589 0.780208067 0.000245295 CG8468 FBtr0087533|FBtr0087534|FBtr0087532 14229566|14229566|14229566 14230620|14230620|14230620 2R + 14229632 14229825 3'utr CG8468 FlyBase G15803.1 AGCCACAACTATCTTCGATAGCACCTTTCGGTATTGGCAACATTAATTGACAATCACTCATCCTGTCGAAGGAACTCCCGATTTCGGAGGGAAGCGAGTGCGAAAGCGTGTTCCGAGTACTTAATACAATTAAGATAAGACTAATCGTAATGTTGTGCCTTCAGCGATATCGAGTGCCTACCACACACACCCCT 75 14229756 0.974011666 26 69 438 0.892857143 1.875061263 0.273809524 0.106666667 0.202380952 75 9 0 75 2R:14229632-14229825 7 CG8468 FBtr0087532|FBtr0087533|FBtr0087534 14229566|14229566|14229566 14230620|14230620|14230620 GATAAGA 7mer-A1 dme-miR-184-5p 2R + 14229724 14229822 3'utr CG8468 FlyBase G11990.2 AGCGAGTGCGAAAGCGTGTTCCGAGTACTTAATACAATTAAGATAAGACTAATCGTAATGTTGTGCCTTCAGCGATATCGAGTGCCTACCACACACACC 36 14229756 0.954831493 14 33 219 0.918367347 1.653212514 0.102040816 0.305555556 0.489795918 36 4 0 45 2R:14229724-14229822 7 17 819 FBgn0033913 3375.036667 105.6 161.63 0.005036982 0.160984848 0.105178494 9 9 9 0.2 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 14229904 14229910 + 2R_14229904_14229910_+ 0.689850894 0.679533966 0.68469243 0.00729515 CG8468 FBtr0087533|FBtr0087534|FBtr0087532 14229566|14229566|14229566 14230620|14230620|14230620 2R + 14229834 14229925 3'utr CG8468 FlyBase G15804.1 ACAACCAACCCTATCCCAAATCACACGCATACGAGCAGAGTGGAGCGCGAGTGTAAATTATGTTTCTATAAGCTTTAGTGGAGGAGCCCATA 571 14229902 0.795326617 16 533 4754 0.937125749 1.517820732 0.393712575 0.133333333 0.260479042 570 24 18 626 2R:14229834-14229925 7 CG8468 FBtr0087532|FBtr0087533|FBtr0087534 14229566|14229566|14229566 14230620|14230620|14230620 AGCTTTA 7mer-A1 dme-miR-79-3p 2R + 14229883 14229925 3'utr CG8468 FlyBase G11991.2 AGTGTAAATTATGTTTCTATAAGCTTTAGTGGAGGAGCCCATA 290 14229902 0.755286871 8 269 2449 0.934939759 1.474888373 0.568674699 0.34375 0.544578313 288 15 12 388 2R:14229883-14229925 7 420 820 FBgn0033913 3375.036667 105.6 161.63 0.124443092 3.977272727 2.598527501 2 2 2 0.2 dme-miR-2a-2-5p 7mer-m1 GATGAGG 2R 14230350 14230356 + 2R_14230350_14230356_+ 0.528822286 0.757201775 0.64301203 0.161488693 CG8468 FBtr0087533|FBtr0087534|FBtr0087532 14229566|14229566|14229566 14230620|14230620|14230620 2R + 14230296 14230374 3'utr CG8468 FlyBase G15805.1 CGCATCGCGGGATTAGCCGATCGTGGACAAAACGAAACAAACAATCAACCGCACGATGAGGCATCTGGTAAAAGTGCTG 23 14230352 0.982134278 4 21 69 1 1.397940009 0.24 0.086956522 0.16 23 0 0 25 2R:14230296-14230374 7 CG8468 FBtr0087532|FBtr0087533|FBtr0087534 14229566|14229566|14229566 14230620|14230620|14230620 GATGAGG 7mer-m1 dme-miR-2a-2-5p 2R + 14230325 14230403 3'utr CG8468 FlyBase G11993.1 AAACGAAACAAACAATCAACCGCACGATGAGGCATCTGGTAAAAGTGCTGTGCTCTTATGCAAACCGATTTAAATATAT 15 14230352 0.94608614 8 15 65 1 1.397940009 0.12 0.466666667 0.68 15 0 0 25 2R:14230325-14230403 7 14.5 821 FBgn0033913 3375.036667 105.6 161.63 0.00429625 0.137310606 0.089711068 -2 -2 -2 0.2 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 2R 14230734 14230739 - 2R_14230734_14230739_- 0.974814851 0.999304656 0.987059754 0.017316904 Opa1 FBtr0339761|FBtr0339761 14230609|14230609 14232701|14232701 2R - 14230621 14230760 3'utr Opa1 FlyBase G23211.1 AAGACACAACACCCGAGGCGTTACTTATTTAACTTGATAGTTTAAGACCACATTTGAAATGTTTGTTCATAGTCACGCTTGAGCCCCTTAGTTAAGCATACTTTGTGCTCCGAAAGTAATAAACAAATAGATCGTTAGTT 52 14230732 0.985720637 20 48 393 0.93442623 1.45484486 0.229508197 0.134615385 0.262295082 52 3 1 57 2R:14230621-14230760 6 Opa1 FBtr0339759|FBtr0339759|FBtr0087574|FBtr0087574|FBtr0339760|FBtr0339760|FBtr0339761|FBtr0339761|FBtr0087573|FBtr0087573 14230609|14230609|14230609|14230609|14230609|14230609|14230609|14230609|14230609|14230609 14230773|14230773|14230773|14230773|14230773|14230773|14232701|14232701|14230773|14230773 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 2R - 14230712 14230759 3'utr Opa1 FlyBase G17597.2 AGACACAACACCCGAGGCGTTACTTATTTAACTTGATAGTTTAAGACC 12 14230740 0.980322849 4 11 64 1 1.278753601 0.263157895 0.5 0.684210526 12 0 0 19 2R:14230712-14230759 6 17.5 822 FBgn0261276 1194.833333 44.64 68.46666667 0.014646394 0.39202509 0.255598832 -7 1 -3 0.2 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 2R 14231557 14231564 - 2R_14231557_14231564_- 0.65645595 0.626105785 0.641280867 0.021460762 Opa1 FBtr0339761 14230609 14232701 2R - 14231544 14231586 5'utr Opa1 FlyBase G23215.1 TGCGACGAATTACCCACTGGCAGTACCTGACGCAGGATCAGCA 15 14231569 0.826937721 6 15 57 1 1.204119983 0.4375 0.066666667 0.125 15 0 0 16 2R:14231544-14231586 8 Opa1 FBtr0339761 14230609 14232701 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2R - 14231536 14231585 5'utr Opa1 FlyBase G17600.1 GCGACGAATTACCCACTGGCAGTACCTGACGCAGGATCAGCAGAAGAGGC 17 14231569 0.935518732 5 16 64 0.954545455 1.322219295 0.227272727 0.235294118 0.409090909 17 1 0 21 2R:14231536-14231585 8 16 823 FBgn0261276 1194.833333 44.64 68.46666667 0.013390989 0.358422939 0.23369036 5 5 5 0.2 dme-miR-965-3p 8mer-A1 TACGCTTA 2R 14235883 14235890 - 2R_14235883_14235890_- 0.60279305 0.60928606 0.606039555 0.004591315 CG8485 FBtr0087572|FBtr0087571|FBtr0087569 14235785|14235785|14235785 14236079|14236079|14236079 2R - 14235861 14235935 3'utr CG8485 FlyBase G23226.1 ATTTAAATTTAGTGGTAGCGTAATTGTTTTGTCTGTCGTCGTCATTACGCTTAAATTATTCTAAATATATTAATT 127 14235891 0.837384015 5 123 1266 0.979166667 1.672097858 0.138888889 0.134920635 0.243055556 126 1 2 141 2R:14235861-14235935 8 CG8485 FBtr0087569|FBtr0087572|FBtr0087571 14235785|14235785|14235785 14236079|14236079|14236079 TACGCTTA 8mer-A1 dme-miR-965-3p 2R - 14235866 14235913 3'utr CG8485 FlyBase G17610.1 ATTGTTTTGTCTGTCGTCGTCATTACGCTTAAATTATTCTAAATATAT 59 14235891 0.81672171 5 57 565 0.969387755 1.375663614 0.142857143 0.338983051 0.602040816 59 0 3 95 2R:14235866-14235913 8 90.5 824 FBgn0033915 1584.563333 63.64333333 98.23 0.057113527 1.421987116 0.921307136 1 1 1 0.2 dme-miR-282-5p 7mer-A1 GAGGCTA 2R 14243425 14243431 + 2R_14243425_14243431_+ 0.449142378 0.811106013 0.630124196 0.255946916 CG8494 FBtr0087535 14243257 14243655 2R + 14243392 14243444 3'utr CG8494 FlyBase G15814.1 AGTAGTTTTATACCTCAGTGTTTTGTTGGGGTGGAGGCTATATAAACTATGTA 23 14243423 0.981281692 5 23 167 1 1.431363764 0.074074074 0.086956522 0.222222222 23 0 0 27 2R:14243392-14243444 7 CG8494 FBtr0087535 14243257 14243655 GAGGCTA 7mer-A1 dme-miR-282-5p 2R + 14243401 14243439 3'utr CG8494 FlyBase G12004.1 ATACCTCAGTGTTTTGTTGGGGTGGAGGCTATATAAACT 14 14243423 0.950742975 4 14 85 1 1.278753601 0.105263158 0.357142857 0.526315789 14 0 0 19 2R:14243401-14243439 7 17.5 825 FBgn0033916 369.3366667 13.09333333 20.11666667 0.047382244 1.336558045 0.869925435 2 2 2 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 2R 14252662 14252667 - 2R_14252662_14252667_- 0.710679661 0.683194671 0.696937166 0.01943483 Hsc70-5 FBtr0339969|FBtr0087568 14252596|14252596 14253189|14253189 2R - 14252614 14252737 3'utr Hsc70-5 FlyBase G23238.1 ATAAGCAGATGCTCATTTGGAGGTTTAAATTTAAGATAAATTGTATGTTGGTTTCCAGTGGACAACCAAATTGACTGGGTAATATGCAATTAAATTTAAACAAATCGATGTAAACTTAAAATAA 76 14252667 0.978910554 17 68 442 0.915789474 1.094421213 0.252631579 0.210526316 0.368421053 76 2 6 87 2R:14252614-14252737 6 Hsc70-5 FBtr0087568|FBtr0339969 14252596|14252596 14253189|14253189 TTGACT 6mer3-8 dme-miR-1012-3p 2R - 14252620 14252694 3'utr Hsc70-5 FlyBase G17618.1 TATGTTGGTTTCCAGTGGACAACCAAATTGACTGGGTAATATGCAATTAAATTTAAACAAATCGATGTAAACTTA 63 14252667 0.957973607 11 58 356 0.93902439 1.40936947 0.463414634 0.26984127 0.43902439 63 3 2 77 2R:14252620-14252694 6 56 826 FBgn0001220 2208.986667 96.32 148.0166667 0.02535099 0.581395349 0.378335773 0 0 0 0.2 dme-miR-305-5p 7mer-A1 GTACAAA 2R 14252798 14252804 - 2R_14252798_14252804_- 0.502430197 0.452416947 0.477423572 0.035364744 Hsc70-5 FBtr0339969|FBtr0087568 14252596|14252596 14253189|14253189 2R - 14252747 14252926 3'utr Hsc70-5 FlyBase G23238.2 TATTGTTTATTATGCAATCAATCGATTTTCTTTCTCCCTTACTTAAAACACGTGGTCACCGTTGTGTTGTGTTCCTGTAAGATTTTGATTATTTTTACGTATCATCTAAACTAGCTGTAGTTGTACAAAAACGAGCACAGCACAAAAATTGAATTCGAATGGCGGCCACGGCGTTCTAGA 91 14252806 0.99353246 22 79 559 0.894230769 1.123384909 0.201923077 0.131868132 0.240384615 91 5 6 93 2R:14252747-14252926 7 Hsc70-5 FBtr0087568|FBtr0339969 14252596|14252596 14253189|14253189 GTACAAA 7mer-A1 dme-miR-305-5p 2R - 14252744 14252819 3'utr Hsc70-5 FlyBase G17619.2 AAACTAGCTGTAGTTGTACAAAAACGAGCACAGCACAAAAATTGAATTCGAATGGCGGCCACGGCGTTCTAGACGC 28 14252806 0.971750105 5 24 123 0.9 0.954242509 0.225 0.25 0.475 28 1 3 36 2R:14252744-14252819 7 40 827 FBgn0001220 2208.986667 96.32 148.0166667 0.01810785 0.415282392 0.270239838 2 2 2 0.2 dme-miR-2a-2-5p 7mer-A1 GATGAGA 2R 14252992 14252998 - 2R_14252992_14252998_- 0.639557938 0.463218554 0.551388246 0.124690715 Hsc70-5 FBtr0339969|FBtr0087568 14252596|14252596 14253189|14253189 2R - 14252973 14253149 3'utr Hsc70-5 FlyBase G23239.1 ATTTAATAATAACCGCTTCTGGATTTCGATTAAGTTCTACGTTAAACACAAACACTTCATATTCCTTTATTGAATCATGAATCACGCAAAGCCACAAGCATTTACCCAAAATGTGAAGTAAACTATCCGATGCGATTAGGTCAAATCAGACGATGAGACTTCCAAGTAAACAGACGA 75 14252996 0.972880971 17 73 440 0.978947368 1.968482949 0.094736842 0.2 0.368421053 75 2 0 93 2R:14252973-14253149 7 Hsc70-5 FBtr0087568|FBtr0339969 14252596|14252596 14253189|14253189 GATGAGA 7mer-A1 dme-miR-2a-2-5p 2R - 14252981 14253019 3'utr Hsc70-5 FlyBase G17621.1 TGCGATTAGGTCAAATCAGACGATGAGACTTCCAAGTAA 31 14252996 0.949659879 5 28 110 0.975609756 1.602059991 0.146341463 0.290322581 0.463414634 31 1 0 40 2R:14252981-14253019 7 26.5 828 FBgn0001220 2208.986667 96.32 148.0166667 0.011996451 0.275124585 0.179033893 -2 -2 -2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 14261079 14261085 + 2R_14261079_14261085_+ 0.799227648 0.614927822 0.707077735 0.130319638 beta4GalNAcTA FBtr0087539|FBtr0087539|FBtr0087539 14260628|14260628|14260628 14261150|14261150|14261150 2R + 14261033 14261088 3'utr beta4GalNAcTA FlyBase G15837.1 AGAAAGCTACACCTATTCCTACAAGGTGAAATGTAGATATTACTTTTGTGATATGC 5 14261077 0.987426376 5 5 43 1 0.903089987 0 0.4 0.625 5 0 0 8 2R:14261033-14261088 7 beta4GalNAcTA FBtr0087539|FBtr0087539|FBtr0087539 14260628|14260628|14260628 14261150|14261150|14261150 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 14261033 14261088 3'utr beta4GalNAcTA FlyBase G12023.1 AGAAAGCTACACCTATTCCTACAAGGTGAAATGTAGATATTACTTTTGTGATATGC 7 14261072 0.985747236 5 6 47 0.875 0.84509804 0 0.142857143 0.25 7 1 0 7 2R:14261033-14261088 7 2.5 829 FBgn0027538 201 13.15333333 20.18 0.012437811 0.19006589 0.123885035 2 7 4.5 0.2 dme-miR-14-3p 8mer-A1 AAGACTGA 2R 14357959 14357966 - 2R_14357959_14357966_- 0.643563348 0.64356535 0.643564349 1.41E-06 Arc1 FBtr0087560 14357925 14359435 2R - 14357950 14358001 3'utr Arc1 FlyBase G23277.1 CGTGGAACTGCTAAAAATATAAAACTGTAAAACTAAAGACTGAAACTAGAAA 252 14357968 0.765409429 9 222 851 0.886363636 1.290034611 0.090909091 0.174603175 0.324675325 252 22 13 273 2R:14357950-14358001 8 Arc1 FBtr0087560 14357925 14359435 AAGACTGA 8mer-A1 dme-miR-14-3p 2R - 14357950 14358031 3'utr Arc1 FlyBase G17650.1 TGGGGGCCTATGGAAGACCACAAGTGGTTGCGTGGAACTGCTAAAAATATAAAACTGTAAAACTAAAGACTGAAACTAGAAA 228 14357968 0.742143498 13 192 822 0.852090032 1.043034632 0.118971061 0.285087719 0.475884244 228 23 23 265 2R:14357950-14358031 8 219 830 FBgn0033926 17202.14 891.9533333 1379.15 0.012730974 0.24552854 0.15879346 2 2 2 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 2R 14413758 14413763 + 2R_14413758_14413763_+ 0.898740923 0.918013926 0.908377425 0.013628069 Sin1 FBtr0087487 14413615 14413851 2R + 14413739 14413832 3'utr Sin1 FlyBase G15867.1 TTAGTTGCTAACTAAAGATTGTGTTACACATGTTTGCCTAGCCTGTAAGTATTTATTGAACTCACCCAACTACGAAGCCTGGTCCTGAAAATAA 26 14413757 0.852376367 9 25 173 1 1.477121255 0.066666667 0.153846154 0.266666667 26 0 0 30 2R:14413739-14413832 6 Sin1 FBtr0087487 14413615 14413851 TGTGTT 6mer3-8 dme-miR-317-3p 2R + 14413730 14413831 3'utr Sin1 FlyBase G12045.1 TAAGTTGTATTAGTTGCTAACTAAAGATTGTGTTACACATGTTTGCCTAGCCTGTAAGTATTTATTGAACTCACCCAACTACGAAGCCTGGTCCTGAAAATA 24 14413757 0.934973957 12 20 172 0.766666667 1.06069784 0.066666667 0.166666667 0.333333333 24 6 1 23 2R:14413730-14413831 6 11 831 FBgn0033935 145.3333333 8.676666667 13.25333333 0.075688073 1.26776796 0.829979879 1 1 1 0.2 dme-miR-2a-2-5p 7mer-m1 GATGAGG 2R 14511347 14511353 + 2R_14511347_14511353_+ 0.757453939 0.73119537 0.744324655 0.018567563 Asx FBtr0332930 14510482 14512493 2R + 14511312 14511391 3'utr Asx FlyBase G15903.1 CGGTGCGGCCAAGCTGTGTGTCGCCTGTGTGATTAGATGAGGTGGATAACGTTTTGTAGTTACTTAGAGACCCGTACTTT 16 14511345 0.982184086 8 16 120 1 1.278753601 0.578947368 0.1875 0.315789474 16 0 0 19 2R:14511312-14511391 7 Asx FBtr0332930 14510482 14512493 GATGAGG 7mer-m1 dme-miR-2a-2-5p 2R + 14511322 14511396 3'utr Asx FlyBase G12078.1 AAGCTGTGTGTCGCCTGTGTGATTAGATGAGGTGGATAACGTTTTGTAGTTACTTAGAGACCCGTACTTTTAGTC 18 14511345 0.984486375 7 17 132 0.965517241 1.447158031 0.275862069 0.388888889 0.620689655 18 1 0 28 2R:14511322-14511396 7 12.5 832 FBgn0261823 1306.773333 24.71666667 37.93 0.009565546 0.505731625 0.329554442 2 2 2 0.2 dme-miR-14-3p 6mer3-8 AAGACT 2R 14512142 14512147 + 2R_14512142_14512147_+ 0.997629041 0.999297626 0.998463333 0.001179878 Asx FBtr0087493|FBtr0332929|FBtr0332930 14511350|14511350|14510482 14512493|14512493|14512493 2R + 14512109 14512188 3'utr Asx FlyBase G15910.1 CTTTAAGTTTAGTATTATCCACCCAAACGATCTAAGACTCTTCATGCCCACATTTCTTTAGCATGTAGCGTATAAACGTA 29 14512149 0.751203212 9 27 182 0.970588235 1.51851394 0 0.172413793 0.294117647 29 1 0 33 2R:14512109-14512188 6 Asx FBtr0332929|FBtr0332930|FBtr0087493 14511350|14510482|14511350 14512493|14512493|14512493 AAGACT 6mer3-8 dme-miR-14-3p 2R + 14512109 14512180 3'utr Asx FlyBase G12083.1 CTTTAAGTTTAGTATTATCCACCCAAACGATCTAAGACTCTTCATGCCCACATTTCTTTAGCATGTAGCGTA 9 14512141 0.972481451 5 8 58 0.933333333 1.146128036 0.2 0.444444444 0.666666667 9 1 0 14 2R:14512109-14512180 6 13.5 833 FBgn0261823 1306.773333 24.71666667 37.93 0.010330789 0.546190155 0.355918798 -7 1 -3 0.2 dme-miR-190-5p 6mer3-8 ACATAT 2R 14584274 14584279 + 2R_14584274_14584279_+ 0.997466121 0.997443286 0.997454703 1.61E-05 ttv FBtr0087495|FBtr0333165|FBtr0333164 14584225|14584225|14584225 14585321|14585321|14587917 2R + 14584247 14584282 3'utr ttv FlyBase G15921.1 TAGCTACAAGCGTTAATAGTACTGAATACATATACA 12 14584263 0.679981291 6 10 69 0.857142857 1.079181246 0 0.166666667 0.285714286 12 2 0 12 2R:14584247-14584282 6 ttv FBtr0333164|FBtr0087495|FBtr0333165 14584225|14584225|14584225 14587917|14585321|14585321 ACATAT 6mer3-8 dme-miR-190-5p 2R + 14584247 14584283 3'utr ttv FlyBase G12092.1 TAGCTACAAGCGTTAATAGTACTGAATACATATACAC 9 14584265 0.948368118 4 8 58 0.933333333 1.146128036 0 0.555555556 0.733333333 9 1 0 14 2R:14584247-14584283 6 9.5 834 FBgn0265974 763.1366667 22.67 34.72 0.012448622 0.419056021 0.273617512 11 9 10 0.2 dme-miR-13b-2-5p 8mer-m1 TTTGACGC 2R 14584400 14584407 + 2R_14584400_14584407_+ 0.618174506 0.618174507 0.618174506 0 ttv FBtr0087495|FBtr0333165|FBtr0333164 14584225|14584225|14584225 14585321|14585321|14587917 2R + 14584378 14584427 3'utr ttv FlyBase G15922.1 ATGTTTAGATGAAATGCTGTTTTTTGACGCTGGCCAAGCGATGCAAGAAC 12 14584401 0.727431545 6 11 89 0.933333333 1.146128036 0.4 0.166666667 0.333333333 12 1 0 14 2R:14584378-14584427 8 ttv FBtr0333164|FBtr0087495|FBtr0333165 14584225|14584225|14584225 14587917|14585321|14585321 TTTGACGC 8mer-m1 dme-miR-13b-2-5p 2R + 14584380 14584431 3'utr ttv FlyBase G12093.1 GTTTAGATGAAATGCTGTTTTTTGACGCTGGCCAAGCGATGCAAGAACTATG 12 14584392 0.974310119 6 12 89 1 1.255272505 0.611111111 0.25 0.5 12 0 0 18 2R:14584380-14584431 8 11.5 835 FBgn0265974 763.1366667 22.67 34.72 0.015069385 0.507278341 0.331221198 -1 8 3.5 0.2 dme-miR-282-5p 6mer2-7 GAGGCT 2R 14584872 14584877 + 2R_14584872_14584877_+ 0.710782645 0.688593855 0.69968825 0.01568978 ttv FBtr0087495|FBtr0333165|FBtr0333164 14584225|14584225|14584225 14585321|14585321|14587917 2R + 14584848 14584887 3'utr ttv FlyBase G15926.1 AATTTCAGTTTTAAATTCCAACTTGAGGCTCCTCGAATTC 23 14584871 0.845713383 2 22 152 0.925925926 0.920818754 0.185185185 0.173913043 0.296296296 23 0 2 25 2R:14584848-14584887 6 ttv FBtr0333164|FBtr0087495|FBtr0333165 14584225|14584225|14584225 14587917|14585321|14585321 GAGGCT 6mer2-7 dme-miR-282-5p 2R + 14584828 14584886 3'utr ttv FlyBase G12097.1 GCGCAAGGCACAGTCGTCTCAATTTCAGTTTTAAATTCCAACTTGAGGCTCCTCGAATT 19 14584871 0.973376014 4 19 114 1 1.491361694 0.096774194 0.473684211 0.677419355 19 0 0 31 2R:14584828-14584886 6 19.5 836 FBgn0265974 763.1366667 22.67 34.72 0.025552435 0.860167622 0.561635945 1 1 1 0.2 dme-miR-980-3p 7mer-A1 GCAGCTA 2R 14760435 14760441 - 2R_14760435_14760441_- 0.823044352 0.822978952 0.823011652 4.62E-05 Spred FBtr0329880 14759644 14761759 2R - 14760416 14760470 3'utr Spred FlyBase G23385.1 GTTTTCAAAAAGTCAACAAACTCATATATGCAGCTATATATATATATAAAAATAA 62 14760443 0.846923084 4 58 513 0.943661972 1.826074803 0.028169014 0.080645161 0.197183099 62 4 0 67 2R:14760416-14760470 7 Spred FBtr0329880 14759644 14761759 GCAGCTA 7mer-A1 dme-miR-980-3p 2R - 14760415 14760464 3'utr Spred FlyBase G17721.1 AAAAAGTCAACAAACTCATATATGCAGCTATATATATATATAAAAATAAT 31 14760443 0.827300942 3 30 258 0.954545455 1.62324929 0 0.322580645 0.522727273 31 2 0 42 2R:14760415-14760464 7 46.5 837 FBgn0020767 764.69 30.76 47.25 0.060808955 1.511703511 0.984126984 2 2 2 0.2 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2R 14760846 14760852 - 2R_14760846_14760852_- 0.773427017 0.764699354 0.769063185 0.006171345 Spred FBtr0329880|FBtr0329880 14759644|14759644 14761759|14761759 2R - 14760833 14760872 3'utr Spred FlyBase G23386.1 TCGCTATGCTCGGCAATTGTTACTTAAATGTGCTTTAGTT 16 14760856 0.84422447 2 15 144 0.941176471 1.204119983 0.352941176 0.0625 0.117647059 16 1 0 16 2R:14760833-14760872 7 Spred FBtr0329880|FBtr0329880 14759644|14759644 14761759|14761759 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2R - 14760810 14760867 3'utr Spred FlyBase G17722.1 ATGCTCGGCAATTGTTACTTAAATGTGCTTTAGTTCAGAACTATGTACCCATTCGGTT 10 14760856 0.990263264 3 9 87 0.916666667 1.041392685 0.416666667 0.2 0.333333333 10 1 0 11 2R:14760810-14760867 7 12 838 FBgn0020767 764.69 30.76 47.25 0.015692634 0.390117035 0.253968254 4 4 4 0.2 dme-miR-980-5p 6mer2-7 AAAAAC 2R 14761334 14761339 - 2R_14761334_14761339_- 0.997846715 0.986429266 0.99213799 0.008073321 Spred FBtr0329880|FBtr0087468|FBtr0329879 14759644|14761154|14761154 14761759|14762038|14762038 2R - 14761320 14761356 3'utr Spred FlyBase G23388.1 CTTAATTATAGTTTTGTAAAAACGGGCTATTTGTTTT 5 14761343 0.96429907 3 5 47 1 0.84509804 0.428571429 0.2 0.428571429 5 0 0 7 2R:14761320-14761356 6 Spred FBtr0329879|FBtr0087468|FBtr0329880 14761154|14761154|14759644 14762038|14762038|14761759 AAAAAC 6mer2-7 dme-miR-980-5p 2R - 14761324 14761348 3'utr Spred FlyBase G17724.1 TAGTTTTGTAAAAACGGGCTATTTG 6 14761343 0.550193491 4 6 43 1 1 0.1 0.5 0.7 6 0 0 10 2R:14761324-14761348 6 5 839 FBgn0020767 764.69 30.76 47.25 0.006538597 0.162548765 0.105820106 4 4 4 0.2 dme-miR-932-5p 6mer2-7 GAATTG 2R 14761449 14761454 - 2R_14761449_14761454_- 0.769905794 0.982063147 0.87598447 0.150017866 Spred FBtr0329880|FBtr0087468|FBtr0329879 14759644|14761154|14761154 14761759|14762038|14762038 2R - 14761436 14761516 3'utr Spred FlyBase G23389.1 AAATCAGTTTGCCAAAATGGGTCTGGGGTTCGATTTTAGTATCATTTCGGTATACTCCATTTGAATTGCCATAATTAATTG 12 14761448 0.934017643 9 11 114 0.916666667 1.041392685 0.166666667 0 0 12 1 0 11 2R:14761436-14761516 6 Spred FBtr0329879|FBtr0087468|FBtr0329880 14761154|14761154|14759644 14762038|14762038|14761759 GAATTG 6mer2-7 dme-miR-932-5p 2R - 14761421 14761473 3'utr Spred FlyBase G17725.1 ATTTCGGTATACTCCATTTGAATTGCCATAATTAATTGTATATACAAAAGAGC 5 14761456 0.980386288 4 5 38 1 0.84509804 0.142857143 0.4 0.571428571 5 0 0 7 2R:14761421-14761473 6 4.5 840 FBgn0020767 764.69 30.76 47.25 0.005884738 0.146293888 0.095238095 -6 2 -2 0.2 dme-miR-2535b-3p 6mer3-8 CCGTGA 2R 14846178 14846183 - 2R_14846178_14846183_- 0.996608929 0.99950625 0.99805759 0.0020487 CG10209 FBtr0329883|FBtr0087462 14846062|14846062 14846330|14846417 2R - 14846151 14846200 3'utr CG10209 FlyBase G23400.1 TTTGTAGTAAGTGGATGCCGTGATCCTCATGTAAATGTTCCCGTGGCAAT 26 14846180 0.809774592 4 26 159 1 1.447158031 0.25 0.038461538 0.107142857 26 0 0 28 2R:14846151-14846200 6 CG10209 FBtr0087462|FBtr0329883 14846062|14846062 14846417|14846330 CCGTGA 6mer3-8 dme-miR-2535b-3p 2R - 14846103 14846200 3'utr CG10209 FlyBase G17730.1 TTTGTAGTAAGTGGATGCCGTGATCCTCATGTAAATGTTCCCGTGGCAATAACAGCGTAGCTCAACTGTGACTCAAGTTCTCAATAGATCGCGACGCA 26 14846181 0.980763921 7 24 166 0.953488372 1.612783857 0.162790698 0.538461538 0.720930233 26 2 0 41 2R:14846103-14846200 6 20.5 841 FBgn0033971 206.33 12.39 18.95 0.099355402 1.654560129 1.081794195 -3 -2 -2.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2R 14857343 14857350 + 2R_14857343_14857350_+ 0.630942985 0.630801846 0.630872415 9.98E-05 HPS1 FBtr0087449 14857301 14857502 2R + 14857330 14857369 3'utr HPS1 FlyBase G15977.1 TTATAACATGATTTCTAGTCAATTTTCGAGACTCCTAGGC 66 14857342 0.719346163 5 64 592 0.988095238 1.919078092 0 0.196969697 0.369047619 66 1 0 83 2R:14857330-14857369 8 HPS1 FBtr0087449 14857301 14857502 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R + 14857330 14857372 3'utr HPS1 FlyBase G12133.1 TTATAACATGATTTCTAGTCAATTTTCGAGACTCCTAGGCGAG 50 14857342 0.73809567 6 48 461 0.985915493 1.84509804 0.056338028 0.32 0.521126761 50 1 0 70 2R:14857330-14857372 8 57 842 FBgn0033973 78.66666667 4.6 7.043333333 0.724576271 12.39130435 8.09275911 1 1 1 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2R 14866690 14866695 - 2R_14866690_14866695_- 0.979790029 0.493638412 0.73671422 0.343761093 Inr-a FBtr0301513 14866611 14867304 2R - 14866674 14866718 3'utr Inr-a FlyBase G23448.1 GATTTAACTGTGAAGTATTTTTTGTACCTTAAACTTCCTATTGAT 7 14866698 0.792076767 5 7 80 1 0.903089987 0.5 0.142857143 0.25 7 0 0 8 2R:14866674-14866718 6 Inr-a FBtr0301513 14866611 14867304 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2R - 14866684 14866773 3'utr Inr-a FlyBase G17765.1 ATGTCAAAACAATAAGTACAACTAAATTGAAAGCGAACCAAAAATAAACCAAAATGATTTAACTGTGAAGTATTTTTTGTACCTTAAACT 15 14866697 0.999905681 8 14 109 1 1.361727836 0.260869565 0.4 0.608695652 15 0 0 23 2R:14866684-14866773 6 8 843 FBgn0264962 1522.043333 60.58 92.41666667 0.005256092 0.132056784 0.086564472 3 2 2.5 0.2 dme-miR-8-3p 8mer-A1 CAGTATTA 2R 14867118 14867125 - 2R_14867118_14867125_- 0.598128347 0.55481099 0.576469668 0.030629957 Inr-a FBtr0301513 14866611 14867304 2R - 14867102 14867147 3'utr Inr-a FlyBase G23449.1 TGGTTATAAAAGCGACCATTGCCAGTATTACTTACTGATCAACATT 49 14867128 0.836142673 4 47 311 0.981132075 1.716003344 0.150943396 0.081632653 0.150943396 49 1 0 52 2R:14867102-14867147 8 Inr-a FBtr0301513 14866611 14867304 CAGTATTA 8mer-A1 dme-miR-8-3p 2R - 14867082 14867151 3'utr Inr-a FlyBase G17766.1 GAGATGGTTATAAAAGCGACCATTGCCAGTATTACTTACTGATCAACATTATTGACAAAGATGTCTATAA 47 14867128 0.975054819 2 47 300 1 1.897627091 0.202531646 0.489361702 0.696202532 47 0 0 79 2R:14867082-14867151 8 46 844 FBgn0264962 1522.043333 60.58 92.41666667 0.03022253 0.75932651 0.497745717 3 3 3 0.2 dme-miR-184-5p 7mer-m8 TGATAAG 2R 14867260 14867266 - 2R_14867260_14867266_- 0.259398435 0.285156326 0.27227738 0.018213586 Inr-a FBtr0301513 14866611 14867304 2R - 14867175 14867375 stop_codon Inr-a FlyBase G23450.1 TCAACCAGAATGGCGGCACTCGATGGCTTAGGTTGGTGGAAGGGCGGGTTATTGGGACCGTATGTGGTTGACAAGTGGAAATCTTCTGCTCAACTCTAACCGAAGTCTGTGATAAGTACAATTGTGATACCAAAGTGGCGTTCCCAACAATGGAATGTGTTAAACTATAGATTTTGCTTGAATTCTGATAAATATCATATT 139 14867270 0.979531721 25 131 906 0.955307263 1.630936119 0.094972067 0.223021583 0.396648045 139 5 3 171 2R:14867175-14867375 7 Inr-a FBtr0301513 14866611 14867304 TGATAAG 7mer-m8 dme-miR-184-5p 2R - 14867196 14867324 stop_codon Inr-a FlyBase G17767.1 TTGGGACCGTATGTGGTTGACAAGTGGAAATCTTCTGCTCAACTCTAACCGAAGTCTGTGATAAGTACAATTGTGATACCAAAGTGGCGTTCCCAACAATGGAATGTGTTAAACTATAGATTTTGCTTG 110 14867270 0.85805092 18 98 710 0.887573964 1.477121255 0.147928994 0.409090909 0.615384615 110 15 4 150 2R:14867196-14867324 7 86 845 FBgn0264962 1522.043333 60.58 92.41666667 0.05650299 1.419610432 0.930568079 4 4 4 0.2 dme-miR-1007-3p 6mer3-8 TGAGCT 2R 14901679 14901684 - 2R_14901679_14901684_- 0.781595462 0.932959458 0.85727746 0.107030511 CG10249 FBtr0303758|FBtr0112929|FBtr0087429|FBtr0303757|FBtr0332856|FBtr0087430|FBtr0301334|FBtr0303756|FBtr0087431 14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473 14901972|14901972|14901972|14901972|14901972|14901972|14902362|14901972|14901972 2R - 14901652 14901731 3'utr CG10249 FlyBase G23465.1 TGAGACACATCGATCAACTAATGCAATTAAGTACTACTGCACAGGCCTGAGCTACCGATCTTAAAGTAGCCGACAAACCA 32 14901694 0.952747833 9 29 153 0.918918919 1.230448921 0.135135135 0.15625 0.27027027 32 2 1 34 2R:14901652-14901731 6 CG10249 FBtr0303757|FBtr0087429|FBtr0112929|FBtr0303758|FBtr0087431|FBtr0303756|FBtr0087430|FBtr0301334|FBtr0332856 14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473 14901972|14901972|14901972|14901972|14901972|14901972|14901972|14902362|14901972 TGAGCT 6mer3-8 dme-miR-1007-3p 2R - 14901658 14901749 3'utr CG10249 FlyBase G17780.1 AACTCTGTGTAATCATTCTGAGACACATCGATCAACTAATGCAATTAAGTACTACTGCACAGGCCTGAGCTACCGATCTTAAAGTAGCCGAC 22 14901680 0.935827302 11 18 99 0.9375 1.176091259 0.1875 0.363636364 0.5625 22 1 1 30 2R:14901658-14901749 6 10.5 846 FBgn0027596 1054.266667 34.76666667 52.75333333 0.00995953 0.302013423 0.199039555 10 -4 3 0.2 dme-miR-92b-3p 7mer-m1 TGCAATT 2R 14901704 14901710 - 2R_14901704_14901710_- 0.371447381 0.618196801 0.494822091 0.174478174 CG10249 FBtr0303758|FBtr0112929|FBtr0087429|FBtr0303757|FBtr0332856|FBtr0087430|FBtr0301334|FBtr0303756|FBtr0087431 14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473 14901972|14901972|14901972|14901972|14901972|14901972|14902362|14901972|14901972 2R - 14901652 14901731 3'utr CG10249 FlyBase G23465.1 TGAGACACATCGATCAACTAATGCAATTAAGTACTACTGCACAGGCCTGAGCTACCGATCTTAAAGTAGCCGACAAACCA 32 14901694 0.952747833 9 29 153 0.918918919 1.230448921 0.135135135 0.15625 0.27027027 32 2 1 34 2R:14901652-14901731 7 CG10249 FBtr0303757|FBtr0087429|FBtr0112929|FBtr0303758|FBtr0087431|FBtr0303756|FBtr0087430|FBtr0301334|FBtr0332856 14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473 14901972|14901972|14901972|14901972|14901972|14901972|14901972|14902362|14901972 TGCAATT 7mer-m1 dme-miR-92b-3p 2R - 14901658 14901749 3'utr CG10249 FlyBase G17780.1 AACTCTGTGTAATCATTCTGAGACACATCGATCAACTAATGCAATTAAGTACTACTGCACAGGCCTGAGCTACCGATCTTAAAGTAGCCGAC 22 14901681 0.935827302 11 18 99 0.9375 1.176091259 0.1875 0.363636364 0.5625 22 1 1 30 2R:14901658-14901749 7 9 847 FBgn0027596 1054.266667 34.76666667 52.75333333 0.00853674 0.258868648 0.170605333 -16 -29 -22.5 0.2 dme-miR-277-3p 7mer-m8 TGCATTT 2R 14939139 14939145 + 2R_14939139_14939145_+ 0.583748096 0.605410896 0.594579496 0.015317913 Lap1 FBtr0087407|FBtr0303759 14939080|14939080 14940722|14939959 2R + 14939055 14939147 stop_codon Lap1 FlyBase G16002.1 ATGAACATAATGTTGTCGAGAAAATGATGGACCATCTATTTACCGACCTAAGCCGATTCCCATCCCGAGACCGAAGACTTTTTGTGCATTTTT 91 14939135 0.968072193 13 89 470 0.990909091 2.037426498 0.472727273 0.175824176 0.318181818 91 1 0 109 2R:14939055-14939147 7 Lap1 FBtr0087407|FBtr0303759 14939080|14939080 14940722|14939959 TGCATTT 7mer-m8 dme-miR-277-3p 2R + 14939095 14939152 3'utr Lap1 FlyBase G12147.1 TACCGACCTAAGCCGATTCCCATCCCGAGACCGAAGACTTTTTGTGCATTTTTCTAAC 66 14939135 0.701910176 8 59 330 0.914893617 1.457377197 0.478723404 0.318181818 0.521276596 66 6 2 86 2R:14939095-14939152 7 38.5 848 FBgn0033984 772.6433333 22.73333333 35.04666667 0.049828942 1.693548387 1.098535286 4 4 4 0.2 dme-miR-8-3p 8mer-A1 CAGTATTA 2R 14940040 14940047 + 2R_14940040_14940047_+ 0.588092431 0.6392777 0.613685065 0.036193473 Lap1 FBtr0087407 14939080 14940722 2R + 14939983 14940059 3'utr Lap1 FlyBase G16005.1 ATTTTCAATGGTGAACTGTTAGCACAAACTGAATTCTCACGCTATTGGCATTGTGATCAGTATTATTATTTATCTGG 65 14940038 0.861331328 14 63 673 0.974025974 1.875061263 0.12987013 0.184615385 0.311688312 65 2 0 75 2R:14939983-14940059 8 Lap1 FBtr0087407 14939080 14940722 CAGTATTA 8mer-A1 dme-miR-8-3p 2R + 14939952 14940061 3'utr Lap1 FlyBase G12152.1 TATTGTCCAATCGATCGAAGTGTCAAACATTATTTTCAATGGTGAACTGTTAGCACAAACTGAATTCTCACGCTATTGGCATTGTGATCAGTATTATTATTTATCTGGTT 41 14940038 0.990487838 13 39 405 0.951612903 1.293730757 0.161290323 0.414634146 0.612903226 41 1 2 59 2R:14939952-14940061 8 43 849 FBgn0033984 772.6433333 22.73333333 35.04666667 0.055653104 1.891495601 1.226935515 2 2 2 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 2R 14945465 14945470 - 2R_14945465_14945470_- 0.977230991 0.982398911 0.979814951 0.003654257 aPKC FBtr0329887|FBtr0329890|FBtr0303431|FBtr0329888|FBtr0303433|FBtr0329889 14945112|14945112|14945112|14945112|14945112|14945112 14946515|14946046|14946515|14946515|14946515|14946063 2R - 14945431 14945490 3'utr aPKC FlyBase G23483.1 ACTCTAATGTAAAATGTGTGTGTGTTAGTATTAGAGAGCAGAGCATGGTTTTTAAAGGCG 10 14945476 0.960664226 5 8 79 0.916666667 1.041392685 0.5 0.1 0.25 10 1 0 11 2R:14945431-14945490 6 aPKC FBtr0329890|FBtr0303431|FBtr0303433|FBtr0329888|FBtr0329889|FBtr0329887 14945112|14945112|14945112|14945112|14945112|14945112 14946046|14946515|14946515|14946515|14946063|14946515 TGTGTT 6mer3-8 dme-miR-317-3p 2R - 14945444 14945485 3'utr aPKC FlyBase G17795.1 AATGTAAAATGTGTGTGTGTTAGTATTAGAGAGCAGAGCATG 5 14945475 0.989935165 4 4 40 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 2R:14945444-14945485 6 5.5 850 FBgn0261854 1305.743333 49.00666667 75.25333333 0.00421216 0.112229629 0.073086464 6 5 5.5 0.2 dme-miR-33-5p 8mer-A1 CAATGCAA 2R 14945723 14945730 - 2R_14945723_14945730_- 0.574672142 0.535252443 0.554962293 0.027873937 aPKC FBtr0329887|FBtr0329890|FBtr0303431|FBtr0329888|FBtr0303433|FBtr0329889 14945112|14945112|14945112|14945112|14945112|14945112 14946515|14946046|14946515|14946515|14946515|14946063 2R - 14945681 14945745 3'utr aPKC FlyBase G23485.1 AACCATTTCAAAACTCAATGCAAGACTTTTCACCAAGAAACTTAGGGGTTTGACGATCCCGCGAG 42 14945717 0.97226582 5 39 232 0.941176471 1.681241237 0.019607843 0.119047619 0.274509804 42 3 0 48 2R:14945681-14945745 8 aPKC FBtr0329890|FBtr0303431|FBtr0303433|FBtr0329888|FBtr0329889|FBtr0329887 14945112|14945112|14945112|14945112|14945112|14945112 14946046|14946515|14946515|14946515|14946063|14946515 CAATGCAA 8mer-A1 dme-miR-33-5p 2R - 14945703 14945772 3'utr aPKC FlyBase G17796.1 AGGCGAACTTTATGCAAGCAAAAGATAAACCATTTCAAAACTCAATGCAAGACTTTTCACCAAGAAACTT 35 14945717 0.885558642 6 34 172 0.979591837 1.681241237 0.040816327 0.285714286 0.489795918 35 1 0 48 2R:14945703-14945772 8 35 851 FBgn0261854 1305.743333 49.00666667 75.25333333 0.026804655 0.714188546 0.465095677 -13 -13 -13 0.2 dme-miR-318-3p 7mer-A1 CCAGTGA 2R 14946395 14946401 - 2R_14946395_14946401_- 0.699915285 0.809231524 0.754573404 0.077298226 aPKC FBtr0329887|FBtr0303429|FBtr0303430|FBtr0303437|FBtr0303434|FBtr0303435|FBtr0303431|FBtr0329888|FBtr0303433|FBtr0303432 14945112|14946104|14946104|14946104|14944456|14946104|14945112|14945112|14945112|14946104 14946515|14946515|14946515|14946776|14946515|14946515|14946515|14946515|14946515|14946515 2R - 14946360 14946412 3'utr aPKC FlyBase G23486.1 TGGCGAGGATTCCAGTGATTACGATTCCGTGGCTGACGATTTGAGTCTCCTGC 12 14946390 0.688360049 5 12 88 1 1.146128036 0.357142857 0.083333333 0.214285714 12 0 0 14 2R:14946360-14946412 7 aPKC FBtr0303434|FBtr0303432|FBtr0303431|FBtr0303435|FBtr0303433|FBtr0329888|FBtr0329887|FBtr0303429|FBtr0303430|FBtr0303437 14944456|14946104|14945112|14946104|14945112|14945112|14945112|14946104|14946104|14946104 14946515|14946515|14946515|14946515|14946515|14946515|14946515|14946515|14946515|14946776 CCAGTGA 7mer-A1 dme-miR-318-3p 2R - 14946361 14946411 3'utr aPKC FlyBase G17797.1 GGCGAGGATTCCAGTGATTACGATTCCGTGGCTGACGATTTGAGTCTCCTG 7 14946392 0.975518432 4 7 44 1 1.079181246 0.583333333 0.571428571 0.75 7 0 0 12 2R:14946361-14946411 7 8 852 FBgn0261854 1305.743333 49.00666667 75.25333333 0.006126778 0.163243096 0.106307583 -11 -9 -10 0.2 dme-bantam-3p 7mer-A1 GATCTCA 2R 15142987 15142993 + 2R_15142987_15142993_+ 0.806893046 0.822730987 0.814812016 0.011199157 chn FBtr0305217 15140383 15143633 2R + 15142975 15143012 3'utr chn FlyBase G16024.1 AAACGGCAGTTGGATCTCAGCACACCTCGTCGGAGTCC 11 15142984 0.827527859 2 10 43 0.928571429 1.113943352 0 0.272727273 0.428571429 11 1 0 13 2R:15142975-15143012 7 chn FBtr0305217 15140383 15143633 GATCTCA 7mer-A1 dme-bantam-3p 2R + 15142975 15143012 3'utr chn FlyBase G12169.1 AAACGGCAGTTGGATCTCAGCACACCTCGTCGGAGTCC 9 15142985 0.850944964 3 8 38 0.9375 1.176091259 0 0.555555556 0.75 9 1 0 15 2R:15142975-15143012 7 10 853 FBgn0015371 413.87 9.896666667 15.28666667 0.024162177 1.010441226 0.65416485 3 2 2.5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 2R 15143592 15143599 + 2R_15143592_15143599_+ 0.501463193 0.499909945 0.500686569 0.001098349 chn FBtr0305217|FBtr0305214|FBtr0111006|FBtr0305213|FBtr0087415|FBtr0305215|FBtr0087416|FBtr0305216 15140383|15143450|15143450|15143450|15143450|15143450|15143450|15143450 15143633|15144783|15143633|15144783|15144783|15144783|15143633|15144783 2R + 15143549 15143617 3'utr chn FlyBase G16025.1 ATTTAAAAAATTGCATTTAATTTTTTAAATTTTAAGTTGTGATGTACCTGAAATATGATTTCTCTTAAA 365 15143591 0.848455508 6 359 2596 0.987288136 2.668385917 0.006355932 0.235616438 0.408898305 365 6 0 466 2R:15143549-15143617 8 chn FBtr0087416|FBtr0305216|FBtr0087415|FBtr0305215|FBtr0111006|FBtr0305213|FBtr0305217|FBtr0305214 15143450|15143450|15143450|15143450|15143450|15143450|15140383|15143450 15143633|15144783|15144783|15144783|15143633|15144783|15143633|15144783 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2R + 15143549 15143619 3'utr chn FlyBase G12170.1 ATTTAAAAAATTGCATTTAATTTTTTAAATTTTAAGTTGTGATGTACCTGAAATATGATTTCTCTTAAACA 276 15143591 0.957782997 6 275 1914 0.997487437 2.598790507 0.005025126 0.358695652 0.555276382 276 1 0 397 2R:15143549-15143619 8 316 854 FBgn0015371 413.87 9.896666667 15.28666667 0.763524778 31.92994274 20.67160925 1 1 1 0.2 dme-miR-283-5p 8mer-m1 TGATATTT 2R 15204187 15204194 + 2R_15204187_15204194_+ 0.54220434 0.523749305 0.532976823 0.013049656 CG11807 FBtr0087363|FBtr0310139 15204105|15204105 15204466|15204466 2R + 15204172 15204212 3'utr CG11807 FlyBase G16044.1 ATAAGTATTGCCTATTGATATTTCTTGCAACTAAACCCTAT 15 15204186 0.754482161 4 13 155 0.882352941 1.176091259 0.117647059 0.133333333 0.235294118 15 2 0 15 2R:15204172-15204212 8 CG11807 FBtr0310139|FBtr0087363 15204105|15204105 15204466|15204466 TGATATTT 8mer-m1 dme-miR-283-5p 2R + 15204170 15204200 3'utr CG11807 FlyBase G12180.1 TTATAAGTATTGCCTATTGATATTTCTTGCA 7 15204186 0.772898109 2 7 82 1 0.954242509 0.333333333 0.285714286 0.444444444 7 0 0 9 2R:15204170-15204200 8 11 855 FBgn0033996 352.6333333 22.09 33.89 0.031193875 0.497962879 0.324579522 1 1 1 0.2 dme-bantam-3p 6mer2-7 GATCTC 2R 15222769 15222774 + 2R_15222769_15222774_+ 0.997830699 0.986413759 0.992122229 0.008072967 CG8079 FBtr0339995|FBtr0339994 15222101|15222101 15223671|15223671 2R + 15222738 15222779 3'utr CG8079 FlyBase G16051.1 CAATGGATCCCCAATGTCCAGCGACGCCATGGATCTCGTTCA 7 15222767 0.963412443 3 7 35 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 2R:15222738-15222779 6 CG8079 FBtr0339995|FBtr0339994 15222101|15222101 15223671|15223671 GATCTC 6mer2-7 dme-bantam-3p 2R + 15222751 15222786 3'utr CG8079 FlyBase G12187.1 ATGTCCAGCGACGCCATGGATCTCGTTCACGGCAGT 12 15222767 0.959183692 2 11 56 0.947368421 1.255272505 0.210526316 0.5 0.684210526 12 1 0 18 2R:15222751-15222786 6 9 856 FBgn0034002 425.32 23.75 36.47 0.021160538 0.378947368 0.246778174 2 2 2 0.2 dme-miR-252-5p 7mer-m8 GTACTTA 2R 15262867 15262873 - 2R_15262867_15262873_- 0.585803575 0.588165056 0.586984316 0.001669833 Trpm FBtr0339080|FBtr0339082|FBtr0339077|FBtr0339079|FBtr0339074|FBtr0339081|FBtr0339078|FBtr0339076 15262806|15262806|15262806|15262806|15262806|15262806|15262806|15262806 15263722|15263722|15263722|15263722|15263722|15263722|15263722|15263722 2R - 15262850 15262977 3'utr Trpm FlyBase G23564.1 AAATTGTTCATGTTTGGCCAATGTGTGCTAGTAACTTAAATTAGATTTTTAAATATTTTCAAGGATTAAGAATAACAATGCATTTTAATAAAATATTTATGATTGTACTTATTTATGTTAAGAATTGT 61 15262874 0.89564363 13 58 592 0.945205479 1.537819095 0.068493151 0.180327869 0.315068493 61 3 1 69 2R:15262850-15262977 7 Trpm FBtr0339074|FBtr0339081|FBtr0339078|FBtr0339076|FBtr0339080|FBtr0339077|FBtr0339082|FBtr0339079 15262806|15262806|15262806|15262806|15262806|15262806|15262806|15262806 15263722|15263722|15263722|15263722|15263722|15263722|15263722|15263722 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 15262852 15262915 3'utr Trpm FlyBase G17844.1 GGATTAAGAATAACAATGCATTTTAATAAAATATTTATGATTGTACTTATTTATGTTAAGAATT 26 15262874 0.798963332 8 26 242 1 1.591064607 0.128205128 0.461538462 0.641025641 26 0 0 39 2R:15262852-15262915 7 17 857 FBgn0265194 654.6833333 11.36 17.34333333 0.025966752 1.496478873 0.980203729 1 1 1 0.2 dme-miR-980-3p 6mer2-7 GCAGCT 2R 15263210 15263215 - 2R_15263210_15263215_- 0.984228718 0.857098237 0.920663478 0.089894839 Trpm FBtr0339080|FBtr0339082|FBtr0339077|FBtr0339079|FBtr0339074|FBtr0339081|FBtr0339078|FBtr0339076 15262806|15262806|15262806|15262806|15262806|15262806|15262806|15262806 15263722|15263722|15263722|15263722|15263722|15263722|15263722|15263722 2R - 15263185 15263242 3'utr Trpm FlyBase G23566.1 TTACCTCAGCTCAATTAGAAACCTATCGCAGCTCAATGTACTTTATGCCTGTCCCTGT 59 15263217 0.833470585 8 55 324 0.935897436 1.386201605 0.064102564 0.305084746 0.474358974 59 3 2 73 2R:15263185-15263242 6 Trpm FBtr0339074|FBtr0339081|FBtr0339078|FBtr0339076|FBtr0339080|FBtr0339077|FBtr0339082|FBtr0339079 15262806|15262806|15262806|15262806|15262806|15262806|15262806|15262806 15263722|15263722|15263722|15263722|15263722|15263722|15263722|15263722 GCAGCT 6mer2-7 dme-miR-980-3p 2R - 15263177 15263228 3'utr Trpm FlyBase G17846.1 TTAGAAACCTATCGCAGCTCAATGTACTTTATGCCTGTCCCTGTCGGAGTTC 31 15263206 0.718915996 5 30 165 0.976190476 1.612783857 0.119047619 0.322580645 0.5 31 1 0 41 2R:15263177-15263228 6 37.5 858 FBgn0265194 654.6833333 11.36 17.34333333 0.057279601 3.301056338 2.162214107 2 -9 -3.5 0.2 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2R 15266558 15266563 - 2R_15266558_15266563_- 0.982292381 0.937702806 0.959997594 0.031529609 Trpm FBtr0339075 15266379 15267776 2R - 15266540 15266582 3'utr Trpm FlyBase G23572.1 TGCTTTAGCTTCTAGGCTCTTTGACATCAGTAATATTATATAT 17 15266562 0.720090845 5 16 151 1 1.255272505 0.111111111 0.058823529 0.111111111 17 0 0 18 2R:15266540-15266582 6 Trpm FBtr0339075 15266379 15267776 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2R - 15266508 15266585 3'utr Trpm FlyBase G17849.1 ACATGCTTTAGCTTCTAGGCTCTTTGACATCAGTAATATTATATATTTTGCAGACTCTCTTTTAATTATTTTTAAACC 8 15266562 0.984523894 4 8 73 1 1.079181246 0.25 0.375 0.583333333 8 0 0 12 2R:15266508-15266585 6 9.5 859 FBgn0265194 654.6833333 11.36 17.34333333 0.014510832 0.836267606 0.547760907 -1 -1 -1 0.2 dme-miR-307a-3p 7mer-m8 GGTTGTG 2R 15312904 15312910 + 2R_15312904_15312910_+ 0.702369098 0.697424659 0.699896878 0.003496219 mus210 FBtr0308700 15312836 15312964 2R + 15312843 15312937 3'utr mus210 FlyBase G16063.1 CAGCCAGGCTCCCGGAAGAGTTGGCGTTGGCAGAAGGCAGTCGAGCATGCTTATCCAAGTTGGTTGTGGCGCTGGCATTTCTGGTATCTGATGAA 13 15312903 0.980783063 8 13 89 1 1.113943352 0.153846154 0 0 13 0 0 13 2R:15312843-15312937 7 mus210 FBtr0308700 15312836 15312964 GGTTGTG 7mer-m8 dme-miR-307a-3p 2R + 15312891 15312937 3'utr mus210 FlyBase G12192.1 GCTTATCCAAGTTGGTTGTGGCGCTGGCATTTCTGGTATCTGATGAA 6 15312903 0.983056415 4 6 48 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 2R:15312891-15312937 7 7 860 FBgn0004698 1924.22 65.94333333 101.31 0.003637838 0.106151746 0.069094857 1 1 1 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 15318102 15318108 - 2R_15318102_15318108_- 0.502449316 0.550313486 0.526381401 0.0338451 CG8155 FBtr0087391 15317815 15318579 2R - 15318058 15318170 3'utr CG8155 FlyBase G23588.1 TTTATCTGCACCTTTGCCAAACGATCAAATGCGAGCTGTTTGGCTGGAAATTGCTTTATTTCTCTAGTCTGCTAATGCATTCCATGCTGTTGTAAAAACTATATTTTAGATTT 100 15318101 0.797159459 17 92 965 0.911290323 2.053078443 0.274193548 0.19 0.346774194 100 11 0 113 2R:15318058-15318170 7 CG8155 FBtr0087391 15317815 15318579 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R - 15318042 15318167 3'utr CG8155 FlyBase G17862.1 ATCTGCACCTTTGCCAAACGATCAAATGCGAGCTGTTTGGCTGGAAATTGCTTTATTTCTCTAGTCTGCTAATGCATTCCATGCTGTTGTAAAAACTATATTTTAGATTTAAAATCGCGCCTAAAT 64 15318101 0.989255874 17 62 594 0.978723404 1.963787827 0.308510638 0.359375 0.563829787 64 2 0 92 2R:15318042-15318167 7 49.5 861 FBgn0034009 669.7533333 19.16666667 29.26666667 0.073907807 2.582608696 1.691343964 -7 -7 -7 0.2 dme-miR-986-5p 6mer3-8 ATTCGA 2R 15324392 15324397 + 2R_15324392_15324397_+ 0.591664003 0.99980348 0.795733741 0.288598208 Arf51F FBtr0087379|FBtr0087376|FBtr0087375|FBtr0087377|FBtr0087378 15324343|15324343|15324343|15324343|15324343 15324892|15324892|15325490|15324892|15324892 2R + 15324188 15324432 lincRNA_intron-lincRNA_exon Arf51F FlyBase G16088.1 GTTCTCTCTTGCAGCAATGAAACCCCATGAAATCCAGGAAAAACTAGGTTTAACTAGAATAAGAGATCGCAATTGGTATGTACAACCATCATGTGCCACATCCGGCGATGGCCTGTCCGAGGGCCTCATTTGGTTAACGTCGAACCATAAGTTATGAGAATCGTAATCGAGCATTTTCTTATATGTATGTATATGGCATGTATTATTCGAAGCGAAGCAAAAGCGAAAATATTCTATTTTATTTA 44 15324381 0.982028839 22 44 322 1 1.73239376 0.240740741 0.181818182 0.333333333 44 0 0 54 2R:15324188-15324432 6 Arf51F FBtr0087378|FBtr0087375|FBtr0087377|FBtr0087379|FBtr0087376 15324343|15324343|15324343|15324343|15324343 15324892|15325490|15324892|15324892|15324892 ATTCGA 6mer3-8 dme-miR-986-5p 2R + 15324360 15324406 3'utr Arf51F FlyBase G12210.1 ATTTTCTTATATGTATGTATATGGCATGTATTATTCGAAGCGAAGCA 14 15324381 0.962592614 6 11 123 0.857142857 0.77815125 0.333333333 0.357142857 0.571428571 14 1 2 18 2R:15324360-15324406 6 12.5 862 FBgn0013750 5123.97 471.35 724.4566667 0.002439515 0.026519571 0.01725431 11 11 11 0.2 dme-miR-304-5p 7mer-A1 GAGATTA 2R 15324693 15324699 + 2R_15324693_15324699_+ 0.823248835 0.81326753 0.818258182 0.007057845 Arf51F FBtr0087379|FBtr0087376|FBtr0087375|FBtr0087377|FBtr0087378 15324343|15324343|15324343|15324343|15324343 15324892|15324892|15325490|15324892|15324892 2R + 15324624 15324718 3'utr Arf51F FlyBase G16089.1 AAGCAGCCGGTAAATATCCGTAAAGTAAATTATGCGTGAAGCACAGAGACATAAAGCAAAACATCAACGGAGATTAGCCTTAAGTAAGTTTTTCT 21 15324698 0.958424837 9 20 97 0.966666667 1.161368002 0.066666667 0.285714286 0.5 21 0 1 29 2R:15324624-15324718 7 Arf51F FBtr0087378|FBtr0087375|FBtr0087377|FBtr0087379|FBtr0087376 15324343|15324343|15324343|15324343|15324343 15324892|15325490|15324892|15324892|15324892 GAGATTA 7mer-A1 dme-miR-304-5p 2R + 15324630 15324712 3'utr Arf51F FlyBase G12211.1 CCGGTAAATATCCGTAAAGTAAATTATGCGTGAAGCACAGAGACATAAAGCAAAACATCAACGGAGATTAGCCTTAAGTAAGT 12 15324697 0.951630036 6 11 46 0.956521739 1.041392685 0.173913043 0.583333333 0.782608696 12 0 1 22 2R:15324630-15324712 7 11.5 863 FBgn0013750 5123.97 471.35 724.4566667 0.002244353 0.024398006 0.015873965 -5 -4 -4.5 0.2 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2R 15324786 15324791 + 2R_15324786_15324791_+ 0.883104483 0.916794233 0.899949358 0.023822215 Arf51F FBtr0087379|FBtr0087376|FBtr0087375|FBtr0087377|FBtr0087378 15324343|15324343|15324343|15324343|15324343 15324892|15324892|15325490|15324892|15324892 2R + 15324758 15324806 3'utr Arf51F FlyBase G16090.1 AAGCTTGTTTATTGCAACTGTTACTATATTTGACTTGAGCAAGGGTGTA 6 15324787 0.994060431 4 4 45 0.555555556 0.698970004 0.333333333 0.5 0.666666667 6 4 0 5 2R:15324758-15324806 6 Arf51F FBtr0087378|FBtr0087375|FBtr0087377|FBtr0087379|FBtr0087376 15324343|15324343|15324343|15324343|15324343 15324892|15325490|15324892|15324892|15324892 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2R + 15324738 15324804 3'utr Arf51F FlyBase G12212.1 ACACGTAAGCAATAAGTTGAAAGCTTGTTTATTGCAACTGTTACTATATTTGACTTGAGCAAGGGTG 10 15324769 0.986719804 7 9 81 0.916666667 1.041392685 0.25 0.2 0.333333333 10 1 0 11 2R:15324738-15324804 6 5 864 FBgn0013750 5123.97 471.35 724.4566667 0.000975806 0.010607829 0.006901724 -1 17 8 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 15367647 15367653 + 2R_15367647_15367653_+ 0.584416219 0.602127703 0.593271961 0.012523922 unc-5 FBtr0087382|FBtr0339998 15367154|15367154 15368300|15368300 2R + 15367607 15367706 3'utr unc-5 FlyBase G16103.1 AAGTGTAGCTGTAGTCATAGTCACTAAGTTACTGTAGTGTTGTGTTCTAAGGTAACTTGCTCAACGAACTTTGTTCCCTATGGGTGCCATGCATTTTATA 26 15367646 0.735667145 14 24 230 0.9375 1.477121255 0.1875 0.153846154 0.3125 26 2 0 30 2R:15367607-15367706 7 unc-5 FBtr0339998|FBtr0087382 15367154|15367154 15368300|15368300 TGTGTTC 7mer-m8 dme-miR-317-3p 2R + 15367606 15367739 3'utr unc-5 FlyBase G12222.1 AAAGTGTAGCTGTAGTCATAGTCACTAAGTTACTGTAGTGTTGTGTTCTAAGGTAACTTGCTCAACGAACTTTGTTCCCTATGGGTGCCATGCATTTTATACACTAAACAGGAAGAATGTAGCGTTTAATTATA 27 15367646 0.771039974 15 24 231 0.95 1.579783597 0.15 0.481481481 0.65 27 2 0 38 2R:15367606-15367739 7 10.5 865 FBgn0034013 1156.016667 26.96666667 41.28333333 0.009082914 0.389369592 0.254339927 1 1 1 0.2 dme-miR-1007-3p 6mer3-8 TGAGCT 2R 15386600 15386605 + 2R_15386600_15386605_+ 0.55360596 0.60993429 0.581770125 0.039830123 SRPK FBtr0087385|FBtr0087384 15385390|15385390 15387851|15387851 2R + 15386575 15386621 3'utr SRPK FlyBase G16125.1 GTATATGTACATGGATGCAGAAACTTGAGCTGAACATAACAATAATG 14 15386600 0.806709942 3 14 71 1 1.204119983 0.3125 0.071428571 0.1875 14 0 0 16 2R:15386575-15386621 6 SRPK FBtr0087385|FBtr0087384 15385390|15385390 15387851|15387851 TGAGCT 6mer3-8 dme-miR-1007-3p 2R + 15386579 15386614 3'utr SRPK FlyBase G12235.1 ATGTACATGGATGCAGAAACTTGAGCTGAACATAAC 9 15386600 0.720080549 3 9 36 1 1.204119983 0 0.333333333 0.625 9 0 0 16 2R:15386579-15386614 6 11 866 FBgn0026370 1940.296667 50.52 77.84666667 0.005669236 0.21773555 0.141303417 0 0 0 0.2 dme-miR-8-3p 6mer3-8 CAGTAT 2R 15387745 15387750 + 2R_15387745_15387750_+ 0.993412208 0.982022225 0.987717216 0.008053946 SRPK FBtr0087385|FBtr0087384 15385390|15385390 15387851|15387851 2R + 15387718 15387774 3'utr SRPK FlyBase G16131.1 AGGAACCCAGCTGCCGAATTGCAATTCCAGTATGTTCTCACGCTTTCAAAGAGTATA 12 15387750 0.987288356 8 11 94 0.923076923 0.77815125 0.153846154 0.083333333 0.153846154 12 0 1 12 2R:15387718-15387774 6 SRPK FBtr0087385|FBtr0087384 15385390|15385390 15387851|15387851 CAGTAT 6mer3-8 dme-miR-8-3p 2R + 15387726 15387775 3'utr SRPK FlyBase G12237.1 AGCTGCCGAATTGCAATTCCAGTATGTTCTCACGCTTTCAAAGAGTATAA 7 15387743 0.977105951 6 7 61 1 1.041392685 0.181818182 0.428571429 0.636363636 7 0 0 11 2R:15387726-15387775 6 9 867 FBgn0026370 1940.296667 50.52 77.84666667 0.004638466 0.178147268 0.115611887 -5 2 -1.5 0.2 dme-miR-1012-3p 7mer-A1 TGACTAA 2R 15515073 15515079 + 2R_15515073_15515079_+ 0.814973168 0.82332925 0.819151209 0.005908655 GalNAc-T1 FBtr0340001|FBtr0087332|FBtr0087331 15515017|15515017|15515017 15515597|15515597|15515597 2R + 15515013 15515099 stop_codon GalNAc-T1 FlyBase G16135.1 CACTGAGGAGATAGGGTGTAGCGGGGGAATGGGATGGGGACCAAAGCAACTGAGAGATACTGACTAACGCCGACTGAACGGAACTCG 77 15515070 0.936978837 8 67 256 0.894117647 1.579783597 0.305882353 0.077922078 0.164705882 77 8 1 76 2R:15515013-15515099 7 GalNAc-T1 FBtr0087331|FBtr0087332|FBtr0340001 15515017|15515017|15515017 15515597|15515597|15515597 TGACTAA 7mer-A1 dme-miR-1012-3p 2R + 15515055 15515105 3'utr GalNAc-T1 FlyBase G12239.1 AAAGCAACTGAGAGATACTGACTAACGCCGACTGAACGGAACTCGAATTCA 51 15515070 0.738278793 6 47 157 0.931034483 1.431363764 0.252873563 0.509803922 0.712643678 51 4 2 81 2R:15515055-15515105 7 60.5 868 FBgn0034025 414.2533333 21.30666667 32.93666667 0.146045898 2.839486859 1.836858618 3 3 3 0.2 dme-miR-11-3p 7mer-m1 TGTGATG 2R 15517768 15517774 - 2R_15517768_15517774_- 0.535592522 0.535593523 0.535593023 7.07E-07 Khc-73 FBtr0329957|FBtr0087357|FBtr0329956|FBtr0329955|FBtr0346265 15517705|15517705|15515776|15517705|15517705 15518577|15518751|15518751|15518751|15518751 2R - 15517747 15517797 3'utr Khc-73 FlyBase G23622.1 ATGTGTAAATTGTATTATTTTGATGTGATGTATTTATAATTTCCCTTTATA 55 15517779 0.662314028 12 50 715 0.904761905 1.755874856 0.222222222 0.145454545 0.253968254 55 6 0 57 2R:15517747-15517797 7 Khc-73 FBtr0329955|FBtr0346265|FBtr0087357|FBtr0329956|FBtr0329957 15517705|15517705|15517705|15515776|15517705 15518751|15518751|15518751|15518751|15518577 TGTGATG 7mer-m1 dme-miR-11-3p 2R - 15517754 15517813 3'utr Khc-73 FlyBase G17883.1 CGCACCGTCGCAGTTAATGTGTAAATTGTATTATTTTGATGTGATGTATTTATAATTTCC 46 15517778 0.619482257 9 42 572 0.920634921 1.286306739 0.174603175 0.282608696 0.476190476 46 3 2 58 2R:15517754-15517813 7 46.5 869 FBgn0019968 1323.716667 22.35333333 34.32 0.035128363 2.080226663 1.354895105 5 4 4.5 0.2 dme-miR-1007-3p 6mer3-8 TGAGCT 2R 15517964 15517969 - 2R_15517964_15517969_- 0.99872364 0.994990879 0.996857259 0.002639417 Khc-73 FBtr0329957|FBtr0087357|FBtr0329956|FBtr0329955|FBtr0346265 15517705|15517705|15515776|15517705|15517705 15518577|15518751|15518751|15518751|15518751 2R - 15517937 15517994 3'utr Khc-73 FlyBase G23623.1 AATTTCGTCTCCATATGACCTTTCCTGAGCTCATTTTCTTTTTAGCGCATTTATATAC 25 15517979 0.990037848 8 24 237 0.96969697 1.505149978 0.03030303 0.24 0.424242424 25 1 0 32 2R:15517937-15517994 6 Khc-73 FBtr0329955|FBtr0346265|FBtr0087357|FBtr0329956|FBtr0329957 15517705|15517705|15517705|15515776|15517705 15518751|15518751|15518751|15518751|15518577 TGAGCT 6mer3-8 dme-miR-1007-3p 2R - 15517946 15518008 3'utr Khc-73 FlyBase G17884.1 TAAGATCTTGCAATAATTTCGTCTCCATATGACCTTTCCTGAGCTCATTTTCTTTTTAGCGCA 12 15517960 0.989103882 8 11 108 1 1.342422681 0.045454545 0.583333333 0.772727273 12 0 0 22 2R:15517946-15518008 6 14 870 FBgn0019968 1323.716667 22.35333333 34.32 0.010576281 0.626304802 0.407925408 10 -9 0.5 0.2 dme-miR-1007-3p 8mer-A1 TGAGCTTA 2R 15518060 15518067 - 2R_15518060_15518067_- 0.587993229 0.546051433 0.567022331 0.029657331 Khc-73 FBtr0329957|FBtr0087357|FBtr0329956|FBtr0329955|FBtr0346265 15517705|15517705|15515776|15517705|15517705 15518577|15518751|15518751|15518751|15518751 2R - 15518019 15518168 3'utr Khc-73 FlyBase G23624.1 TTCGATTTTGGAATGAAGCGTTTTACTGATATATTTTCTAATGGTTCTTTGCCTTTAGTTTAGTTAAATTGTTTTTGATATCAATGTGACTTGTTTAACGATGAGCTTATATTTTTACTTGTTATTGACTATATTCAATATATTTGTATA 70 15518067 0.993028279 21 65 770 0.93902439 1.886490725 0.243902439 0.1 0.231707317 70 5 0 77 2R:15518019-15518168 8 Khc-73 FBtr0329955|FBtr0346265|FBtr0087357|FBtr0329956|FBtr0329957 15517705|15517705|15517705|15515776|15517705 15518751|15518751|15518751|15518751|15518577 TGAGCTTA 8mer-A1 dme-miR-1007-3p 2R - 15518047 15518098 3'utr Khc-73 FlyBase G17885.1 GTTTTTGATATCAATGTGACTTGTTTAACGATGAGCTTATATTTTTACTTGT 32 15518067 0.888361174 8 31 332 0.977272727 1.633468456 0.5 0.34375 0.522727273 32 1 0 43 2R:15518047-15518098 8 20.5 871 FBgn0019968 1323.716667 22.35333333 34.32 0.015486698 0.917089174 0.597319347 0 0 0 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 15518195 15518201 - 2R_15518195_15518201_- 0.658365812 0.548380572 0.603373192 0.077771281 Khc-73 FBtr0329957|FBtr0087357|FBtr0329956|FBtr0329955|FBtr0346265 15517705|15517705|15515776|15517705|15517705 15518577|15518751|15518751|15518751|15518751 2R - 15518179 15518219 3'utr Khc-73 FlyBase G23625.1 CTTTTGATTCCATTGTTTTGTGTTCGTGTAGTTAATTGTCG 15 15518202 0.755233482 4 15 228 1 1.230448921 0.176470588 0.133333333 0.235294118 15 0 0 17 2R:15518179-15518219 7 Khc-73 FBtr0329955|FBtr0346265|FBtr0087357|FBtr0329956|FBtr0329957 15517705|15517705|15517705|15515776|15517705 15518751|15518751|15518751|15518751|15518577 TGTGTTC 7mer-m8 dme-miR-317-3p 2R - 15518102 15518215 3'utr Khc-73 FlyBase G17886.1 TGATTCCATTGTTTTGTGTTCGTGTAGTTAATTGTCGTTTTTTGCTTTTCGATTTTGGAATGAAGCGTTTTACTGATATATTTTCTAATGGTTCTTTGCCTTTAGTTTAGTTAA 21 15518202 0.984626508 10 20 248 0.961538462 1.397940009 0.115384615 0.238095238 0.384615385 21 1 0 25 2R:15518102-15518215 7 11 872 FBgn0019968 1323.716667 22.35333333 34.32 0.008309935 0.49209663 0.320512821 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 15562855 15562861 - 2R_15562855_15562861_- 0.75189659 0.746844444 0.749370517 0.003572445 CG8195 FBtr0087353|FBtr0087353|FBtr0087353 15562695|15562695|15562695 15563163|15563163|15563163 2R - 15562828 15562887 3'utr CG8195 FlyBase G23655.2 TAGATCCCACGAATACCGTTTATCTATGTGATAGTCTACAACGTTTTGCTGAACTCCACC 22 15562865 0.989705506 6 18 194 0.888888889 1.380211242 0.481481481 0.227272727 0.37037037 22 3 0 24 2R:15562828-15562887 7 CG8195 FBtr0087353|FBtr0087353|FBtr0087353 15562695|15562695|15562695 15563163|15563163|15563163 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 15562848 15562890 3'utr CG8195 FlyBase G17905.1 CTTTAGATCCCACGAATACCGTTTATCTATGTGATAGTCTACA 17 15562864 0.992582069 3 13 153 0.8 1 0.44 0.411764706 0.6 17 4 1 20 2R:15562848-15562890 7 17 873 FBgn0034032 150.0733333 7.953333333 12.14666667 0.113277953 2.137468567 1.399560922 4 3 3.5 0.2 dme-miR-965-3p 6mer3-8 TACGCT 2R 15566490 15566495 - 2R_15566490_15566495_- 0.797647314 0.928552018 0.863099666 0.092563601 Flo1 FBtr0087351|FBtr0087352 15566269|15566269 15566573|15566573 2R - 15566438 15566514 3'utr Flo1 FlyBase G23661.1 AAGAAAACAAAAAAGAAATTACGCTATATTGAACGATCGAATACTTCAAAACTGAAATCGAACGCATTTAAATTTCT 34 15566496 0.96756181 6 32 177 0.955555556 1.633468456 0.022222222 0.235294118 0.422222222 34 2 0 43 2R:15566438-15566514 6 Flo1 FBtr0087351|FBtr0087352 15566269|15566269 15566573|15566573 TACGCT 6mer3-8 dme-miR-965-3p 2R - 15566457 15566508 3'utr Flo1 FlyBase G17910.1 ACAAAAAAGAAATTACGCTATATTGAACGATCGAATACTTCAAAACTGAAAT 26 15566495 0.929498394 5 25 135 0.96969697 1.505149978 0.03030303 0.230769231 0.393939394 26 1 0 32 2R:15566457-15566508 6 27.5 874 FBgn0024754 1484.76 99.31333333 151.9633333 0.018521512 0.27690139 0.180964706 1 0 0.5 0.2 dme-miR-1007-3p 6mer3-8 TGAGCT 2R 15569895 15569900 - 2R_15569895_15569900_- 0.992593203 0.832828054 0.912710628 0.112970986 Cdk5 FBtr0087350 15569526 15570131 2R - 15569873 15569934 3'utr Cdk5 FlyBase G23670.1 AATCCCTACCAATGTGACACTTAATATAGCCATTTGAGCTGCCAAATTAACATTTATCGATA 30 15569901 0.964499519 7 29 199 0.947368421 1.556302501 0.026315789 0.266666667 0.421052632 30 2 0 36 2R:15569873-15569934 6 Cdk5 FBtr0087350 15569526 15570131 TGAGCT 6mer3-8 dme-miR-1007-3p 2R - 15569884 15569935 3'utr Cdk5 FlyBase G17916.1 CAATCCCTACCAATGTGACACTTAATATAGCCATTTGAGCTGCCAAATTAAC 17 15569901 0.968412684 4 16 94 1 1.414973348 0.038461538 0.5 0.692307692 16 0 0 26 2R:15569884-15569935 6 20 875 FBgn0013762 182.3333333 13.78 20.92333333 0.109689214 1.45137881 0.955870639 1 1 1 0.2 dme-miR-14-3p 7mer-A1 AGACTGA 2R 15572953 15572959 + 2R_15572953_15572959_+ 0.81142148 0.784858581 0.79814003 0.018782807 CG30466 FBtr0340004|FBtr0087339 15572925|15572925 15573170|15573170 2R + 15572941 15572964 3'utr CG30466 FlyBase G16152.1 GAACGAAGCTGTAGACTGATGACT 23 15572960 0.649982143 3 22 73 0.970588235 1.217483944 0.029411765 0.347826087 0.558823529 23 0 1 33 2R:15572941-15572964 7 CG30466 FBtr0087339|FBtr0340004 15572925|15572925 15573170|15573170 AGACTGA 7mer-A1 dme-miR-14-3p 2R + 15572941 15572965 3'utr CG30466 FlyBase G12258.1 GAACGAAGCTGTAGACTGATGACTA 18 15572960 0.660615026 3 17 64 0.928571429 0.937852093 0 0.5 0.678571429 18 0 2 26 2R:15572941-15572965 7 20 876 FBgn0050466 280.3266667 17.32333333 26.4 0.071345335 1.154512219 0.757575758 -7 -7 -7 0.2 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 15854560 15854565 + 2R_15854560_15854565_+ 0.939016792 0.646631344 0.792824068 0.20674777 tun FBtr0308815|FBtr0308814 15853194|15853194 15854981|15855645 2R + 15854550 15854581 3'utr tun FlyBase G16212.1 AAAAATAAATGCTGTGCAAAAGTCTCAAAGTT 7 15854559 0.76654153 3 7 34 1 1 0.1 0.428571429 0.6 7 0 0 10 2R:15854550-15854581 6 tun FBtr0308815|FBtr0308814 15853194|15853194 15854981|15855645 GCTGTG 6mer2-7 dme-miR-1008-3p 2R + 15854545 15854600 3'utr tun FlyBase G12307.1 TGTATAAAAATAAATGCTGTGCAAAAGTCTCAAAGTTAAACCTAAACTCTTAATTA 10 15854559 0.960943703 2 10 53 1 1.146128036 0.142857143 0.3 0.5 10 0 0 14 2R:15854545-15854600 6 7.5 877 FBgn0034046 647.0966667 28.77333333 44.19 0.011590231 0.260658017 0.169721656 1 1 1 0.2 dme-miR-317-3p 8mer-A1 TGTGTTCA 2R 15869650 15869657 - 2R_15869650_15869657_- 0.583938274 0.583907955 0.583923114 2.14E-05 sli FBtr0330732 15869493 15873378 2R - 15869633 15869703 3'utr sli FlyBase G23755.1 TTAACCTTTTTCCGGCGAAGCTTTCGACGGTTCACAGCCGCAAAATTGTGTTCAGCTAATTAATTAGGAAG 74 15869658 0.907520099 4 67 494 0.892857143 1.397940009 0.083333333 0.121621622 0.226190476 74 7 2 75 2R:15869633-15869703 8 sli FBtr0330732 15869493 15873378 TGTGTTCA 8mer-A1 dme-miR-317-3p 2R - 15869632 15869699 3'utr sli FlyBase G17980.1 CCTTTTTCCGGCGAAGCTTTCGACGGTTCACAGCCGCAAAATTGTGTTCAGCTAATTAATTAGGAAGA 38 15869658 0.979534386 4 36 242 0.967741935 1.477121255 0.14516129 0.394736842 0.629032258 38 1 1 60 2R:15869632-15869699 8 53.5 878 FBgn0264089 1642.536667 21.12333333 32.62 0.032571571 2.532744201 1.640098099 1 1 1 0.2 dme-miR-8-3p 6mer2-7 AGTATT 2R 15870380 15870385 - 2R_15870380_15870385_- 0.841947354 1 0.920973677 0.111760065 sli FBtr0330730|FBtr0330729|FBtr0330733|FBtr0330732|FBtr0330734|FBtr0330731 15870052|15870052|15870052|15869493|15870052|15870052 15873378|15873378|15873378|15873378|15871419|15873378 2R - 15870322 15870411 3'utr sli FlyBase G23762.1 TTTAGTCTAAGTTGCTCAAAGGATAAAGTATTTTGATAGAACCGGAAAGGATCGAGAAACAAACCAATAAACCACAAAGAATCGAATTGA 11 15870380 0.964979251 6 10 49 0.923076923 1.079181246 0.307692308 0.181818182 0.307692308 11 1 0 12 2R:15870322-15870411 6 sli FBtr0330734|FBtr0330731|FBtr0330733|FBtr0330732|FBtr0330730|FBtr0330729 15870052|15870052|15870052|15869493|15870052|15870052 15871419|15873378|15873378|15873378|15873378|15873378 AGTATT 6mer2-7 dme-miR-8-3p 2R - 15870356 15870411 3'utr sli FlyBase G17985.1 TTTAGTCTAAGTTGCTCAAAGGATAAAGTATTTTGATAGAACCGGAAAGGATCGAG 8 15870376 0.970534642 6 8 45 1 1.113943352 0 0.5 0.692307692 8 0 0 13 2R:15870356-15870411 6 4.5 879 FBgn0264089 1642.536667 21.12333333 32.62 0.002739665 0.213034559 0.137952177 -5 -9 -7 0.2 dme-bantam-3p 6mer2-7 GATCTC 2R 15873130 15873135 - 2R_15873130_15873135_- 0.999999991 0.984797215 0.992398603 0.010750003 sli FBtr0330730|FBtr0330729|FBtr0330733|FBtr0330732|FBtr0330731 15870052|15870052|15870052|15869493|15870052 15873378|15873378|15873378|15873378|15873378 2R - 15873057 15873284 3'utr sli FlyBase G23772.1 ATAGTAACGATAGTCTTAGCCATAGCACTAGGGATAGCACGGATGTTAGGGGGACGAAGGATGAAGCGGAGGAGAGTGCTGACGCGGGGGAGACAACGGAGGAGGTGAGGGACGAGAGTGATGATTACCCCACGGACGGCATGCAGTCCGATCTCTACGACGACACCATCGATGACGACGATGACGATGGTCTCGATGATGATTATGCAGACGAGGAGGATGGGGAGG 92 15873129 0.999981595 19 79 374 0.866071429 1.032529225 0.160714286 0.173913043 0.321428571 92 7 8 97 2R:15873057-15873284 6 sli FBtr0330731|FBtr0330733|FBtr0330732|FBtr0330730|FBtr0330729 15870052|15870052|15869493|15870052|15870052 15873378|15873378|15873378|15873378|15873378 GATCTC 6mer2-7 dme-bantam-3p 2R - 15873120 15873159 3'utr sli FlyBase G17993.1 TACCCCACGGACGGCATGCAGTCCGATCTCTACGACGACA 20 15873129 0.855016061 4 16 80 0.838709677 1.414973348 0.032258065 0.3 0.548387097 20 5 0 26 2R:15873120-15873159 6 33 880 FBgn0264089 1642.536667 21.12333333 32.62 0.020090876 1.562253432 1.011649295 -6 -6 -6 0.2 dme-miR-1012-3p 6mer2-7 TGACTA 2R 15936199 15936204 - 2R_15936199_15936204_- 0.775522038 0.805010783 0.790266411 0.02085173 Mlf FBtr0087292|FBtr0306650|FBtr0302149|FBtr0087294|FBtr0087295|FBtr0087293|FBtr0306649 15935891|15935891|15935891|15935891|15935891|15935891|15936089 15936459|15936459|15937286|15936459|15936459|15938254|15936459 2R - 15936183 15936256 3'utr Mlf FlyBase G23841.1 GATGTGCACGCAGGATACAGAACAACTTGCTTAAATTTACTTAAAACAAATGTGACTATTCAACGCCGAAATCA 26 15936199 0.675114678 9 23 128 0.931034483 1.431363764 0.275862069 0.076923077 0.172413793 26 2 0 27 2R:15936183-15936256 6 Mlf FBtr0087293|FBtr0306649|FBtr0087294|FBtr0087295|FBtr0306650|FBtr0302149|FBtr0087292 15935891|15936089|15935891|15935891|15935891|15935891|15935891 15938254|15936459|15936459|15936459|15936459|15937286|15936459 TGACTA 6mer2-7 dme-miR-1012-3p 2R - 15936182 15936256 3'utr Mlf FlyBase G18057.1 GATGTGCACGCAGGATACAGAACAACTTGCTTAAATTTACTTAAAACAAATGTGACTATTCAACGCCGAAATCAT 15 15936200 0.960857502 6 14 75 1 1.431363764 0.222222222 0.666666667 0.814814815 15 0 0 27 2R:15936182-15936256 6 14.5 881 FBgn0034051 2421.99 180.2466667 275.5966667 0.005986812 0.080445316 0.052613118 -5 -4 -4.5 0.2 dme-miR-970-3p 6mer3-8 TCTTAT 2R 15936314 15936319 - 2R_15936314_15936319_- 0.992727229 0.992315768 0.992521498 0.000290904 Mlf FBtr0087292|FBtr0306650|FBtr0302149|FBtr0087294|FBtr0087295|FBtr0087293|FBtr0306649 15935891|15935891|15935891|15935891|15935891|15935891|15936089 15936459|15936459|15937286|15936459|15936459|15938254|15936459 2R - 15936305 15936346 3'utr Mlf FlyBase G23842.1 AACAAACACAATTCTTTACCAGTTCTGTCTTATCCTGCGTGA 14 15936324 0.947104158 5 9 127 0.777777778 0.84509804 0 0.142857143 0.333333333 14 3 1 14 2R:15936305-15936346 6 Mlf FBtr0087293|FBtr0306649|FBtr0087294|FBtr0087295|FBtr0306650|FBtr0302149|FBtr0087292 15935891|15936089|15935891|15935891|15935891|15935891|15935891 15938254|15936459|15936459|15936459|15936459|15937286|15936459 TCTTAT 6mer3-8 dme-miR-970-3p 2R - 15936304 15936337 3'utr Mlf FlyBase G18058.1 AATTCTTTACCAGTTCTGTCTTATCCTGCGTGAG 10 15936317 0.606502231 3 10 91 1 1.146128036 0 0.4 0.571428571 10 0 0 14 2R:15936304-15936337 6 11 882 FBgn0034051 2421.99 180.2466667 275.5966667 0.00454172 0.061027481 0.0399134 5 -2 1.5 0.2 dme-miR-252-5p 7mer-m8 GTACTTA 2R 15989698 15989704 - 2R_15989698_15989704_- 0.431181448 0.537278444 0.484229946 0.075021908 CG8314 FBtr0087268 15989681 15989940 2R - 15989685 15989736 3'utr CG8314 FlyBase G23862.1 AAATATCCATTTCCGTGGCCGGGTGAAGATGTGTACTTACCTGACAGCCCTA 21 15989702 0.973605614 4 20 126 1 1.397940009 0.36 0.19047619 0.32 21 0 0 25 2R:15989685-15989736 7 CG8314 FBtr0087268 15989681 15989940 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 15989683 15989727 3'utr CG8314 FlyBase G18068.1 TTTCCGTGGCCGGGTGAAGATGTGTACTTACCTGACAGCCCTACT 17 15989705 0.706773237 6 16 109 0.896551724 1.414973348 0.344827586 0.529411765 0.724137931 17 3 0 26 2R:15989683-15989727 7 17.5 883 FBgn0034057 362 35.10666667 54.10333333 0.048342541 0.49848082 0.323455117 -2 1 -0.5 0.2 dme-miR-965-3p 8mer-A1 TACGCTTA 2R 15993469 15993476 + 2R_15993469_15993476_+ 0.617666687 0.506034778 0.561850733 0.078935673 CG8320 FBtr0087202 15993411 15993707 2R + 15993435 15993491 3'utr CG8320 FlyBase G16233.1 GGTGGTTAAGGGGTTCCTGGTTTTAATGAGATTCTACGCTTAGTTGTGTGTGCGTTT 18 15993461 0.737970341 8 17 175 0.952380952 1 0.142857143 0.111111111 0.238095238 18 0 1 20 2R:15993435-15993491 8 CG8320 FBtr0087202 15993411 15993707 TACGCTTA 8mer-A1 dme-miR-965-3p 2R + 15993442 15993490 3'utr CG8320 FlyBase G12324.1 AAGGGGTTCCTGGTTTTAATGAGATTCTACGCTTAGTTGTGTGTGCGTT 14 15993461 0.822717235 6 12 145 0.842105263 1.204119983 0.421052632 0.285714286 0.473684211 14 3 0 16 2R:15993442-15993490 8 13 884 FBgn0034059 68.78 8.71 13.22666667 0.189008433 1.492537313 0.982862903 8 8 8 0.2 dme-miR-999-3p 6mer3-8 AGTTAA 2R 15994141 15994146 - 2R_15994141_15994146_- 0.914304779 0.999507122 0.956905951 0.060247124 ATPCL FBtr0340016|FBtr0300598|FBtr0300596|FBtr0300597 15993801|15993801|15993801|15993529 15994227|15994227|15994227|15994227 2R - 15994111 15994160 3'utr ATPCL FlyBase G23872.1 TCGGAAGTTGTTGTAGTTAAGCACAGATGTATGATGTTAGGCAAAGAGGT 13 15994150 0.943904136 5 12 76 1 1.176091259 0.266666667 0.153846154 0.266666667 13 0 0 15 2R:15994111-15994160 6 ATPCL FBtr0300597|FBtr0300596|FBtr0300598|FBtr0340016 15993529|15993801|15993801|15993801 15994227|15994227|15994227|15994227 AGTTAA 6mer3-8 dme-miR-999-3p 2R - 15994102 15994164 3'utr ATPCL FlyBase G18076.1 TTATTCGGAAGTTGTTGTAGTTAAGCACAGATGTATGATGTTAGGCAAAGAGGTCACCCGCTC 11 15994124 0.776302388 5 10 74 1 1.176091259 0.333333333 0.272727273 0.466666667 11 0 0 15 2R:15994102-15994164 6 7.5 885 FBgn0020236 1766.27 52.70333333 80.88666667 0.004246236 0.14230599 0.092722328 4 -22 -9 0.2 dme-miR-307a-3p 7mer-A1 GTTGTGA 2R 16013663 16013669 + 2R_16013663_16013669_+ 0.822737631 0.821862381 0.822300006 0.00061886 CG8389 FBtr0087205|FBtr0087204 16013535|16013535 16013815|16013815 2R + 16013635 16013681 3'utr CG8389 FlyBase G16251.1 TTCCACTCTCGCCGCAGTAGTTATCTGAGTTGTGAGGAAGGACCAGT 10 16013658 0.971705354 6 10 62 1 1.079181246 0.416666667 0.1 0.25 10 0 0 12 2R:16013635-16013681 7 CG8389 FBtr0087205|FBtr0087204 16013535|16013535 16013815|16013815 GTTGTGA 7mer-A1 dme-miR-307a-3p 2R + 16013635 16013687 3'utr CG8389 FlyBase G12335.1 TTCCACTCTCGCCGCAGTAGTTATCTGAGTTGTGAGGAAGGACCAGTGTCAGG 9 16013660 0.96877785 6 9 53 1 1.146128036 0.5 0.444444444 0.642857143 9 0 0 14 2R:16013635-16013687 7 8 886 FBgn0034063 106.9966667 6.81 10.28666667 0.074768684 1.174743025 0.777705768 5 3 4 0.2 dme-miR-34-5p 7mer-A1 ACTGCCA 2R 16013773 16013779 + 2R_16013773_16013779_+ 0.669822281 0.695446303 0.682634292 0.018118904 CG8389 FBtr0087205|FBtr0087204 16013535|16013535 16013815|16013815 2R + 16013750 16013792 3'utr CG8389 FlyBase G16252.1 TAGCCCCTAGACCTAACTTTTGTACTGCCATAAGAGCCAAAAT 20 16013770 0.915043189 7 19 143 0.956521739 1.041392685 0.043478261 0.15 0.260869565 20 0 1 22 2R:16013750-16013792 7 CG8389 FBtr0087205|FBtr0087204 16013535|16013535 16013815|16013815 ACTGCCA 7mer-A1 dme-miR-34-5p 2R + 16013749 16013789 3'utr CG8389 FlyBase G12336.1 TTAGCCCCTAGACCTAACTTTTGTACTGCCATAAGAGCCAA 15 16013770 0.785004705 5 14 109 0.952380952 1.301029996 0.047619048 0.333333333 0.523809524 15 1 0 20 2R:16013749-16013789 7 17 887 FBgn0034063 106.9966667 6.81 10.28666667 0.158883454 2.496328928 1.652624757 3 3 3 0.2 dme-miR-79-3p 8mer-A1 TAGCTTTA 2R 16060133 16060140 + 2R_16060133_16060140_+ 0.625363578 0.625363956 0.625363767 2.83E-07 CG8405 FBtr0340020 16059325 16060835 2R + 16060091 16060163 3'utr CG8405 FlyBase G16263.1 GCCTCCACTGATGCTTCTACTGTTTGCCCAAGCTCTTTGCTTTAGCTTTATGGAATACCATAGGATTGTCAAC 11 16060130 0.991243007 5 9 103 0.9375 1.176091259 0.125 0.272727273 0.5 11 1 0 15 2R:16060091-16060163 8 CG8405 FBtr0340020 16059325 16060835 TAGCTTTA 8mer-A1 dme-miR-79-3p 2R + 16060100 16060174 3'utr CG8405 FlyBase G12340.2 GATGCTTCTACTGTTTGCCCAAGCTCTTTGCTTTAGCTTTATGGAATACCATAGGATTGTCAACTGTAATATATT 11 16060132 0.985149209 7 11 114 1 1.113943352 0.461538462 0.181818182 0.307692308 11 0 0 13 2R:16060100-16060174 8 7 888 FBgn0034071 1286.916667 39.81333333 61.00666667 0.005439358 0.175820496 0.114741558 3 1 2 0.2 dme-miR-184-3p 6mer2-7 CCGTCC 2R 16082067 16082072 - 2R_16082067_16082072_- 0.681497225 0.920749529 0.801123377 0.169176924 Dg FBtr0306238|FBtr0087256|FBtr0087258|FBtr0087257 16081174|16081665|16081665|16081665 16083271|16083271|16083271|16083271 2R - 16081986 16082137 3'utr Dg FlyBase G23940.1 ATGTAGCTGCTAGTTGGGCAGTACTTACTACACTACTACCTACTACTATCTACTACCTAATCCAACCGTCCCTTATCCCTGAATCGAACTAACATGTAGTGAGTAAAGCATTGATTTTATATGAACTTATAGTGGAAGTCCAGAGCCTAAGT 29 16082064 0.983456213 14 25 198 0.848484848 1.146128036 0.060606061 0.137931034 0.242424242 29 4 1 28 2R:16081986-16082137 6 Dg FBtr0087258|FBtr0087257|FBtr0306238|FBtr0087256 16081665|16081665|16081174|16081665 16083271|16083271|16083271|16083271 CCGTCC 6mer2-7 dme-miR-184-3p 2R - 16082015 16082089 3'utr Dg FlyBase G18122.1 TCTACTACCTAATCCAACCGTCCCTTATCCCTGAATCGAACTAACATGTAGTGAGTAAAGCATTGATTTTATATG 12 16082064 0.84238356 7 11 77 1 1.204119983 0.125 0.25 0.4375 12 0 0 16 2R:16082015-16082089 6 12 889 FBgn0034072 2596.65 61.60333333 94.99 0.004621339 0.194794654 0.126329087 -8 -8 -8 0.2 dme-miR-980-3p 8mer-A1 GGCAGCTA 2R 16082658 16082665 - 2R_16082658_16082665_- 0.666925485 0.664025818 0.665475651 0.002050398 Dg FBtr0306238|FBtr0087256|FBtr0087258|FBtr0087257 16081174|16081665|16081665|16081665 16083271|16083271|16083271|16083271 2R - 16082618 16082676 3'utr Dg FlyBase G23943.1 CCACGTCCCTGGGCAGCTATTAGACTTTCAGCTTGATTTGCTCAAGCTGAATTGCTTGC 31 16082657 0.841091109 6 29 179 0.947368421 1.255272505 0.236842105 0.193548387 0.342105263 31 1 1 36 2R:16082618-16082676 8 Dg FBtr0087258|FBtr0087257|FBtr0306238|FBtr0087256 16081665|16081665|16081174|16081665 16083271|16083271|16083271|16083271 GGCAGCTA 8mer-A1 dme-miR-980-3p 2R - 16082619 16082676 3'utr Dg FlyBase G18123.1 CCACGTCCCTGGGCAGCTATTAGACTTTCAGCTTGATTTGCTCAAGCTGAATTGCTTG 28 16082657 0.739482349 6 26 155 0.944444444 1.531478917 0.027777778 0.285714286 0.444444444 28 2 0 34 2R:16082619-16082676 8 25.5 890 FBgn0034072 2596.65 61.60333333 94.99 0.009820345 0.41393864 0.26844931 -8 -8 -8 0.2 dme-miR-999-3p 6mer3-8 AGTTAA 2R 16082709 16082714 - 2R_16082709_16082714_- 0.986638951 0.917278906 0.951958928 0.049044997 Dg FBtr0306238|FBtr0087256|FBtr0087258|FBtr0087257 16081174|16081665|16081665|16081665 16083271|16083271|16083271|16083271 2R - 16082692 16082726 3'utr Dg FlyBase G23944.1 GTACTAAAATTAAGTTAAACGCGAGAAAGAAGGCA 9 16082712 0.931765806 3 7 27 0.888888889 0.903089987 0.111111111 0 0 9 1 0 8 2R:16082692-16082726 6 Dg FBtr0087258|FBtr0087257|FBtr0306238|FBtr0087256 16081665|16081665|16081174|16081665 16083271|16083271|16083271|16083271 AGTTAA 6mer3-8 dme-miR-999-3p 2R - 16082693 16082724 3'utr Dg FlyBase G18124.1 ACTAAAATTAAGTTAAACGCGAGAAAGAAGGC 5 16082711 0.961968141 2 3 14 0.857142857 0.77815125 0.285714286 0.4 0.571428571 5 1 0 6 2R:16082693-16082724 6 6.5 891 FBgn0034072 2596.65 61.60333333 94.99 0.002503225 0.105513771 0.068428256 -2 -3 -2.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2R 16106360 16106365 + 2R_16106360_16106365_+ 0.962527873 0.966865194 0.964696533 0.003066934 Rho1 FBtr0087214|FBtr0087216|FBtr0087211|FBtr0087212|FBtr0087213|FBtr0087217 16106050|16106050|16106050|16106050|16106050|16106050 16106489|16107229|16106489|16107229|16107229|16107229 2R + 16106238 16106377 3'utr Rho1 FlyBase G16277.1 AACAAACATGAGCAGAAAACAGAGAGCTTGAGCTAGAAGATCAGCGGAGGAGGGATGCAGCGAGATATAAGGGAAGGCAGCACCAAGTAGAATGTCAAATGCGGATTTGATTTTATATACAGTCTAGTGTAGTTATAAAC 33 16106343 0.960980034 16 32 156 0.975609756 1.602059991 0.341463415 0.151515152 0.317073171 33 1 0 40 2R:16106238-16106377 6 Rho1 FBtr0087211|FBtr0087212|FBtr0087213|FBtr0087217|FBtr0087214|FBtr0087216 16106050|16106050|16106050|16106050|16106050|16106050 16106489|16107229|16107229|16107229|16106489|16107229 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 16106312 16106380 3'utr Rho1 FlyBase G12354.1 AGGCAGCACCAAGTAGAATGTCAAATGCGGATTTGATTTTATATACAGTCTAGTGTAGTTATAAACCGA 9 16106338 0.979705776 6 9 67 1 1.041392685 0 0.222222222 0.363636364 9 0 0 11 2R:16106312-16106380 6 4.5 892 FBgn0014020 13816.13667 1325.1 2048.813333 0.000325706 0.00339597 0.002196393 17 22 19.5 0.2 dme-miR-980-5p 7mer-m1 AAAAACT 2R 16106418 16106424 + 2R_16106418_16106424_+ 0.765573522 0.764486009 0.765029765 0.000768979 Rho1 FBtr0087214|FBtr0087216|FBtr0087211|FBtr0087212|FBtr0087213|FBtr0087217 16106050|16106050|16106050|16106050|16106050|16106050 16106489|16107229|16106489|16107229|16107229|16107229 2R + 16106385 16106452 3'utr Rho1 FlyBase G16278.1 AACAACAGTAATAACTCTGGCATTATTATTTGTAAAAACTAGGGCAGAGCAGATCAATCAGTCAGCCA 11 16106402 0.979376616 9 11 71 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 2R:16106385-16106452 7 Rho1 FBtr0087211|FBtr0087212|FBtr0087213|FBtr0087217|FBtr0087214|FBtr0087216 16106050|16106050|16106050|16106050|16106050|16106050 16106489|16107229|16107229|16107229|16106489|16107229 AAAAACT 7mer-m1 dme-miR-980-5p 2R + 16106386 16106438 3'utr Rho1 FlyBase G12355.1 ACAACAGTAATAACTCTGGCATTATTATTTGTAAAAACTAGGGCAGAGCAGAT 6 16106403 0.967776752 4 5 32 1 1 0 0.5 0.7 6 0 0 10 2R:16106386-16106438 7 3.5 893 FBgn0014020 13816.13667 1325.1 2048.813333 0.000253327 0.00264131 0.001708306 16 15 15.5 0.2 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 16106575 16106580 + 2R_16106575_16106580_+ 0.958182815 0.99870567 0.978444242 0.028654017 Rho1 FBtr0087216|FBtr0087212|FBtr0087213|FBtr0087217 16106050|16106050|16106050|16106050 16107229|16107229|16107229|16107229 2R + 16106556 16106623 3'utr Rho1 FlyBase G16280.1 GTTGTCAAGTGTAGAGTCGGCTGTGGCTGGACGAGATTGTGTCGTATGCGAGGGTGAGTGAGTCAGGT 12 16106572 0.982148918 6 9 66 0.769230769 0.698970004 0.692307692 0.083333333 0.153846154 12 2 1 10 2R:16106556-16106623 6 Rho1 FBtr0087212|FBtr0087213|FBtr0087217|FBtr0087216 16106050|16106050|16106050|16106050 16107229|16107229|16107229|16107229 GCTGTG 6mer2-7 dme-miR-1008-3p 2R + 16106531 16106592 3'utr Rho1 FlyBase G12357.1 TGTATGTTATTATTTCGTTAACTGTGTTGTCAAGTGTAGAGTCGGCTGTGGCTGGACGAGAT 6 16106565 0.970215811 3 6 46 1 1.113943352 0.615384615 0.5 0.769230769 6 0 0 13 2R:16106531-16106592 6 6.5 894 FBgn0014020 13816.13667 1325.1 2048.813333 0.000470464 0.00490529 0.003172568 3 10 6.5 0.2 dme-miR-2a-2-5p 7mer-A1 GATGAGA 2R 16106703 16106709 + 2R_16106703_16106709_+ 0.782907165 0.782911235 0.7829092 2.83E-06 Rho1 FBtr0087216|FBtr0087212|FBtr0087213|FBtr0087217 16106050|16106050|16106050|16106050 16107229|16107229|16107229|16107229 2R + 16106650 16106732 3'utr Rho1 FlyBase G16281.1 GGAAACGGAATCGGATGTTGGATCCCGGGGTCCAAGGAGGTCGTAGGCGTCAAGATGAGAGTTATGTTCCCATTAAATCTATC 12 16106705 0.983969879 8 11 79 0.923076923 0.77815125 0.153846154 0.083333333 0.153846154 12 0 1 12 2R:16106650-16106732 7 Rho1 FBtr0087212|FBtr0087213|FBtr0087217|FBtr0087216 16106050|16106050|16106050|16106050 16107229|16107229|16107229|16107229 GATGAGA 7mer-A1 dme-miR-2a-2-5p 2R + 16106668 16106758 3'utr Rho1 FlyBase G12358.1 TGGATCCCGGGGTCCAAGGAGGTCGTAGGCGTCAAGATGAGAGTTATGTTCCCATTAAATCTATCAAATACAGAGAGACCAGGCCGCCAAT 12 16106714 0.975307998 5 10 72 1 1.255272505 0.111111111 0.416666667 0.611111111 12 0 0 18 2R:16106668-16106758 7 7.5 895 FBgn0014020 13816.13667 1325.1 2048.813333 0.000542844 0.00565995 0.003660656 -2 -11 -6.5 0.2 dme-bantam-3p 6mer3-8 TGATCT 2R 16107213 16107218 + 2R_16107213_16107218_+ 0.998281303 0.999985152 0.999133227 0.001204839 Rho1 FBtr0087216|FBtr0087212|FBtr0087213|FBtr0087217 16106050|16106050|16106050|16106050 16107229|16107229|16107229|16107229 2R + 16107117 16107231 3'utr Rho1 FlyBase G16285.1 ACCGTCAATCGTGTAATTCTCACACAGAAGTTGAAAAACTCGAAGATGCATCAGATACAACCAAACTATATTATACTTATGAATAAACAGTACATTTGATCTACTCTTGGTTTAA 32 16107212 0.984671253 13 31 248 0.975609756 1.602059991 0.219512195 0.28125 0.43902439 32 1 0 40 2R:16107117-16107231 6 Rho1 FBtr0087212|FBtr0087213|FBtr0087217|FBtr0087216 16106050|16106050|16106050|16106050 16107229|16107229|16107229|16107229 TGATCT 6mer3-8 dme-bantam-3p 2R + 16107179 16107225 3'utr Rho1 FlyBase G12360.1 AAACTATATTATACTTATGAATAAACAGTACATTTGATCTACTCTTG 12 16107212 0.98813775 6 10 93 0.8 1.079181246 0.066666667 0.25 0.4 12 3 0 12 2R:16107179-16107225 6 15 896 FBgn0014020 13816.13667 1325.1 2048.813333 0.001085687 0.0113199 0.007321311 1 1 1 0.2 dme-miR-277-3p 7mer-m8 TGCATTT 2R 16107996 16108002 - 2R_16107996_16108002_- 0.413968502 0.375297539 0.39463302 0.027344526 Ric FBtr0300576|FBtr0087254 16107675|16107438 16108756|16108756 2R - 16107979 16108038 3'utr Ric FlyBase G23957.2 AAGCCCAAATTGATAATTTAAGTCCACGACAGCCGATGCATTTGTTGTTTAAGTTTGAGA 36 16107998 0.840768139 6 35 227 0.957446809 1.653212514 0.085106383 0.222222222 0.404255319 36 2 0 45 2R:16107979-16108038 7 Ric FBtr0300576|FBtr0087254 16107675|16107438 16108756|16108756 TGCATTT 7mer-m8 dme-miR-277-3p 2R - 16107982 16108019 3'utr Ric FlyBase G18134.1 AAGTCCACGACAGCCGATGCATTTGTTGTTTAAGTTTG 31 16107998 0.664441808 5 31 157 1 1.716003344 0.057692308 0.483870968 0.692307692 31 0 0 52 2R:16107982-16108019 7 31.5 897 FBgn0265605 681.3433333 39.13333333 60.19 0.046232198 0.804940375 0.523342748 -4 -4 -4 0.2 dme-miR-277-3p 7mer-A1 GCATTTA 2R 16141707 16141713 + 2R_16141707_16141713_+ 0.82117335 0.822238025 0.821705687 0.000752786 Got1 FBtr0087231|FBtr0087232 16141592|16141592 16141928|16141928 2R + 16141672 16141794 3'utr Got1 FlyBase G16301.2 ATCCCAAAGCTGGATCACAGATGTCTGCACCATTGGCATTTAAATCAAACCAACAACAATTGCAATTACTAAACGTTTATACGCGGCTTTTAGATGGATATACACATATTATACACCGGAAAC 69 16141705 0.980309831 15 66 466 0.975 1.892094603 0.0875 0.130434783 0.25 69 2 0 78 2R:16141672-16141794 7 Got1 FBtr0087231|FBtr0087232 16141592|16141592 16141928|16141928 GCATTTA 7mer-A1 dme-miR-277-3p 2R + 16141678 16141768 3'utr Got1 FlyBase G12377.1 AAGCTGGATCACAGATGTCTGCACCATTGGCATTTAAATCAAACCAACAACAATTGCAATTACTAAACGTTTATACGCGGCTTTTAGATGG 29 16141705 0.918595857 8 29 185 1 1.672097858 0.063829787 0.413793103 0.638297872 29 0 0 47 2R:16141678-16141768 7 27 898 FBgn0001124 622.6666667 44.53666667 67.53 0.043361884 0.606242048 0.399822301 2 2 2 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT 2R 16145990 16145996 - 2R_16145990_16145996_- 0.658787604 0.658769011 0.658778308 1.32E-05 Ext2 FBtr0100513 16145902 16146381 2R - 16145970 16146010 3'utr Ext2 FlyBase G23963.1 TAGGTCGTAATATTGGCAGCTTTTATCTAGACTTTATTTTG 118 16145997 0.783795038 12 103 1142 0.892307692 1.023065304 0.192307692 0.093220339 0.176923077 118 4 10 116 2R:16145970-16146010 7 Ext2 FBtr0100513 16145902 16146381 GGCAGCT 7mer-m8 dme-miR-980-3p 2R - 16145911 16146010 3'utr Ext2 FlyBase G18137.1 TAGGTCGTAATATTGGCAGCTTTTATCTAGACTTTATTTTGATTTTAAATCAATAATTTAAAAAACTGAAACTGGCCTGTAAATAAGAATTAAAATAATC 112 16145998 0.989554471 18 99 985 0.883040936 1.224734438 0.105263158 0.375 0.590643275 112 12 8 151 2R:16145911-16146010 7 98.5 899 FBgn0029175 123.3333333 5.64 8.726666667 0.798648649 17.46453901 11.28724217 1 2 1.5 0.2 dme-bantam-3p 6mer2-7 GATCTC 2R 16146227 16146232 - 2R_16146227_16146232_- 0.999971101 0.999999212 0.999985157 1.99E-05 Ext2 FBtr0100513 16145902 16146381 2R - 16146202 16146247 3'utr Ext2 FlyBase G23966.1 AGGCCAACTTATCTGGATCTCGCTTAGAAAATCAATTTCGTCATTG 22 16146235 0.631600099 8 20 139 0.925925926 0.920818754 0.111111111 0.227272727 0.37037037 22 0 2 25 2R:16146202-16146247 6 Ext2 FBtr0100513 16145902 16146381 GATCTC 6mer2-7 dme-bantam-3p 2R - 16146203 16146290 3'utr Ext2 FlyBase G18139.1 AATGTTCGTTTATATCATAGCAATACCTTCTTAACGGATAAAGAGGCCAACTTATCTGGATCTCGCTTAGAAAATCAATTTCGTCATT 11 16146224 0.987250248 6 10 82 0.95 1.278753601 0.05 0.636363636 0.8 11 1 0 19 2R:16146203-16146290 6 12 900 FBgn0029175 123.3333333 5.64 8.726666667 0.097297297 2.127659574 1.375095493 3 -8 -2.5 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 2R 16146326 16146333 - 2R_16146326_16146333_- 0.635648886 0.625770199 0.630709542 0.006985296 Ext2 FBtr0100513 16145902 16146381 2R - 16146321 16146357 3'utr Ext2 FlyBase G23967.1 TTCCAGAGGAACCTATGCAGATATACCAAAGACTTCT 29 16146334 0.903560685 3 28 134 0.971428571 1.531478917 0.228571429 0.206896552 0.342857143 29 1 0 34 2R:16146321-16146357 8 Ext2 FBtr0100513 16145902 16146381 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 16146321 16146402 stop_codon Ext2 FlyBase G18140.1 AATGATATTGGTAGCTTATAAGGGTCCTTAGCTTTGAGGCCAACATTCCAGAGGAACCTATGCAGATATACCAAAGACTTCT 21 16146334 0.900705693 4 20 109 0.972222222 1.243038049 0.166666667 0.476190476 0.694444444 21 0 1 35 2R:16146321-16146402 8 21.5 901 FBgn0029175 123.3333333 5.64 8.726666667 0.174324324 3.812056738 2.463712758 1 1 1 0.2 dme-miR-988-3p 6mer2-7 CAAGGG 2R 16183693 16183698 + 2R_16183693_16183698_+ 0.999828552 0.999843456 0.999836004 1.05E-05 Lis-1 FBtr0087240|FBtr0087241|FBtr0304747|FBtr0087236 16183675|16183675|16183675|16183675 16185103|16185103|16183991|16185103 2R + 16183680 16183733 3'utr Lis-1 FlyBase G16359.1 AAGGAAGAATCGGCAAGGGTTCTGCTTACTTCTCAATTTAAACATAAATAAAGC 26 16183706 0.627784791 6 24 215 0.970588235 1.51851394 0.029411765 0.269230769 0.441176471 26 1 0 33 2R:16183680-16183733 6 Lis-1 FBtr0087236|FBtr0304747|FBtr0087241|FBtr0087240 16183675|16183675|16183675|16183675 16185103|16183991|16185103|16185103 CAAGGG 6mer2-7 dme-miR-988-3p 2R + 16183668 16183720 stop_codon Lis-1 FlyBase G12426.1 TGTCGTTAAATTAAGGAAGAATCGGCAAGGGTTCTGCTTACTTCTCAATTTAA 22 16183706 0.785535448 8 19 168 0.84 0.84509804 0.12 0.136363636 0.24 22 2 2 21 2R:16183668-16183720 6 20.5 902 FBgn0015754 1628.096667 94.36 143.8866667 0.01259139 0.217253073 0.142473243 -13 -13 -13 0.2 dme-miR-999-3p 6mer3-8 AGTTAA 2R 16183988 16183993 + 2R_16183988_16183993_+ 0.999270169 0.999272795 0.999271482 1.84E-06 Lis-1 FBtr0087240|FBtr0087241|FBtr0087236 16183675|16183675|16183675 16185103|16185103|16185103 2R + 16183975 16184012 3'utr Lis-1 FlyBase G16361.1 GATTATCGTTTAAAGTTAATGCCGCCCTCCTTTATAAA 5 16183993 0.717100882 3 5 43 1 0.903089987 0 0.4 0.625 5 0 0 8 2R:16183975-16184012 6 Lis-1 FBtr0087236|FBtr0087241|FBtr0087240 16183675|16183675|16183675 16185103|16185103|16185103 AGTTAA 6mer3-8 dme-miR-999-3p 2R + 16183975 16184008 3'utr Lis-1 FlyBase G12428.1 GATTATCGTTTAAAGTTAATGCCGCCCTCCTTTA 5 16183993 0.73429486 3 5 34 1 0.954242509 0 0.6 0.777777778 5 0 0 9 2R:16183975-16184008 6 5 903 FBgn0015754 1628.096667 94.36 143.8866667 0.003071071 0.052988554 0.034749571 -5 -5 -5 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 16184444 16184450 + 2R_16184444_16184450_+ 0.661086289 0.661540148 0.661313219 0.000320885 Lis-1 FBtr0087240|FBtr0087241|FBtr0087236 16183675|16183675|16183675 16185103|16185103|16185103 2R + 16184394 16184476 3'utr Lis-1 FlyBase G16363.1 GATAACAGTTTGCTTCTTTTAACCATATTCACTTTACACAATTCCTGTTTTGTGTTCTTTTTCGCGAAAGGATCTTCAACAAA 47 16184443 0.994858123 9 45 627 0.981818182 1.73239376 0.036363636 0.170212766 0.290909091 47 1 0 54 2R:16184394-16184476 7 Lis-1 FBtr0087236|FBtr0087241|FBtr0087240 16183675|16183675|16183675 16185103|16185103|16185103 TGTGTTC 7mer-m8 dme-miR-317-3p 2R + 16184409 16184460 3'utr Lis-1 FlyBase G12430.1 CTTTTAACCATATTCACTTTACACAATTCCTGTTTTGTGTTCTTTTTCGCGA 27 16184443 0.99430167 6 27 354 1 1.531478917 0.029411765 0.222222222 0.382352941 27 0 0 34 2R:16184409-16184460 7 34.5 904 FBgn0015754 1628.096667 94.36 143.8866667 0.021190388 0.365621026 0.239772043 1 1 1 0.2 dme-miR-33-5p 7mer-m8 CAATGCA 2R 16184972 16184978 + 2R_16184972_16184978_+ 0.672736229 0.611696932 0.64221658 0.043161303 Lis-1 FBtr0087240|FBtr0087241|FBtr0087236 16183675|16183675|16183675 16185103|16185103|16185103 2R + 16184938 16184991 3'utr Lis-1 FlyBase G16366.1 AAAAAACAAAATGCGCACTAAAGCCACGACAACTCAATGCATAATTCGCAAAAC 10 16184971 0.918386417 4 10 33 1 1.041392685 0.272727273 0.1 0.181818182 10 0 0 11 2R:16184938-16184991 7 Lis-1 FBtr0087236|FBtr0087241|FBtr0087240 16183675|16183675|16183675 16185103|16185103|16185103 CAATGCA 7mer-m8 dme-miR-33-5p 2R + 16184956 16184985 3'utr Lis-1 FlyBase G12433.1 TAAAGCCACGACAACTCAATGCATAATTCG 5 16184979 0.944892381 4 4 18 0.857142857 0.77815125 0.428571429 0.4 0.571428571 5 1 0 6 2R:16184956-16184985 7 7 905 FBgn0015754 1628.096667 94.36 143.8866667 0.004299499 0.074183976 0.0486494 1 -7 -3 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT 2R 16194249 16194255 - 2R_16194249_16194255_- 0.658026205 0.657879201 0.657952703 0.000103945 calypso FBtr0087245|FBtr0087246 16194060|16194060 16194434|16194434 2R - 16194231 16194291 3'utr calypso FlyBase G23979.1 ACTCAAATGCGGTTCTTTTAAATACGAAATCAACTTGGCAGCTTCATTTTTATTTGATCGC 175 16194257 0.832030415 6 172 1135 0.985148515 1.696793085 0.475247525 0.131428571 0.247524752 175 0 3 199 2R:16194231-16194291 7 calypso FBtr0087246|FBtr0087245 16194060|16194060 16194434|16194434 GGCAGCT 7mer-m8 dme-miR-980-3p 2R - 16194231 16194268 3'utr calypso FlyBase G18147.1 ACGAAATCAACTTGGCAGCTTCATTTTTATTTGATCGC 147 16194257 0.838331054 4 146 982 0.990990991 2.342422681 0.436936937 0.367346939 0.581081081 147 2 0 220 2R:16194231-16194268 7 159.5 906 FBgn0262166 217.8466667 12.40333333 18.96 0.732166356 12.85944639 8.412447257 2 2 2 0.2 dme-miR-8-3p 7mer-m8 CAGTATT 2R 16194362 16194368 - 2R_16194362_16194368_- 0.659976528 0.654840428 0.657408478 0.003631771 calypso FBtr0087245|FBtr0087246 16194060|16194060 16194434|16194434 2R - 16194315 16194391 3'utr calypso FlyBase G23980.1 TGCATTTTTAAGACCATTCATTCCAGTATTGTTTTTCTACAATTTCCCCACCAAGAAGCACCATTAACCCATAAGAT 28 16194371 0.989152823 6 28 266 1 1.477121255 0.1 0.071428571 0.133333333 28 0 0 30 2R:16194315-16194391 7 calypso FBtr0087246|FBtr0087245 16194060|16194060 16194434|16194434 CAGTATT 7mer-m8 dme-miR-8-3p 2R - 16194335 16194392 3'utr calypso FlyBase G18148.1 TTGCATTTTTAAGACCATTCATTCCAGTATTGTTTTTCTACAATTTCCCCACCAAGAA 8 16194371 0.991667507 3 8 87 1 1.146128036 0.142857143 0.375 0.642857143 8 0 0 14 2R:16194335-16194392 7 15 907 FBgn0262166 217.8466667 12.40333333 18.96 0.06885577 1.209352325 0.791139241 3 3 3 0.2 dme-miR-980-5p 7mer-m1 AAAAACT 2R 16198018 16198024 + 2R_16198018_16198024_+ 0.667760192 0.608325226 0.638042709 0.042026892 CG42837 FBtr0303860 16197515 16199378 2R + 16197968 16198069 3'utr CG42837 FlyBase G16397.1 CGCAGTCCAGCGATGTGTTCACCAACCTCGCTCTAGAGGATTGGCTGTACAAAAACTTTGATTTCAGCCGCCACCATGTGCTGCTGCTGTGGGCCAACGACC 27 16198009 0.974301643 9 27 160 1 1.51851394 0.060606061 0.148148148 0.303030303 27 0 0 33 2R:16197968-16198069 7 CG42837 FBtr0303860 16197515 16199378 AAAAACT 7mer-m1 dme-miR-980-5p 2R + 16197939 16198052 3'utr CG42837 FlyBase G12451.1 TTCGGAGATCAAGAAGTCCGTGTTCATCTCGCAGTCCAGCGATGTGTTCACCAACCTCGCTCTAGAGGATTGGCTGTACAAAAACTTTGATTTCAGCCGCCACCATGTGCTGCT 14 16198025 0.980568834 7 13 90 0.888888889 0.77815125 0.222222222 0.571428571 0.777777778 14 0 3 24 2R:16197939-16198052 7 16 908 FBgn0262026 104.31 5.966666667 9.106666667 0.153388937 2.681564246 1.756954612 9 -7 1 0.2 dme-miR-965-3p 7mer-m8 TACGCTT 2R 16198724 16198730 + 2R_16198724_16198730_+ 0.49068755 0.590967801 0.540827675 0.070908809 CG42837 FBtr0303860 16197515 16199378 2R + 16198698 16198742 3'utr CG42837 FlyBase G16399.1 TACGAGTATTTGAGAACGGCTGCAACTACGCTTGAAGACGGCGGC 6 16198724 0.902221087 2 6 19 1 0.954242509 0.222222222 0.5 0.666666667 6 0 0 9 2R:16198698-16198742 7 CG42837 FBtr0303860 16197515 16199378 TACGCTT 7mer-m8 dme-miR-965-3p 2R + 16198709 16198746 3'utr CG42837 FlyBase G12454.1 GAGAACGGCTGCAACTACGCTTGAAGACGGCGGCAGCA 5 16198724 0.89781642 2 5 15 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 2R:16198709-16198746 7 4.5 909 FBgn0262026 104.31 5.966666667 9.106666667 0.043140638 0.754189944 0.494143485 0 0 0 0.2 dme-miR-277-3p 6mer3-8 TGCATT 2R 16199351 16199356 + 2R_16199351_16199356_+ 0.999775887 0.999945825 0.999860856 0.000120137 CG42837 FBtr0303860 16197515 16199378 2R + 16199318 16199372 3'utr CG42837 FlyBase G16402.1 TTACTTTTGTTACCACGTTTTATATAAAAGAACTGCATTAAATGTTTAAACATTG 22 16199341 0.983602483 6 21 168 0.956521739 1.342422681 0.086956522 0.045454545 0.086956522 22 1 0 22 2R:16199318-16199372 6 CG42837 FBtr0303860 16197515 16199378 TGCATT 6mer3-8 dme-miR-277-3p 2R + 16199333 16199370 3'utr CG42837 FlyBase G12456.1 CGTTTTATATAAAAGAACTGCATTAAATGTTTAAACAT 19 16199341 0.673189151 8 18 137 0.962962963 1.113943352 0 0.315789474 0.518518519 19 0 1 26 2R:16199333-16199370 6 20.5 910 FBgn0262026 104.31 5.966666667 9.106666667 0.196529575 3.43575419 2.251098097 10 10 10 0.2 dme-miR-2a-2-5p 7mer-A1 GATGAGA 2R 16267155 16267161 - 2R_16267155_16267161_- 0.66768575 0.78235052 0.725018135 0.081080258 Khc FBtr0087184 16266958 16267263 2R - 16267113 16267265 stop_codon Khc FlyBase G24030.1 AGATCCAATCACCACCTGTCGCCGCCCAGTTCAGCTCCGCTTTAAACTAAACTAAATGGATTACGTTATACATACTTAACATAACTGATAATTGCCTTCGCTTAGATGAGATGTGTCGCGATCATGTGCAGCGCTTTAAATATACATACATAT 38 16267171 0.83742286 18 37 278 0.978723404 1.662757832 0.14893617 0.236842105 0.382978723 38 1 0 46 2R:16267113-16267265 7 Khc FBtr0087184 16266958 16267263 GATGAGA 7mer-A1 dme-miR-2a-2-5p 2R - 16267121 16267265 stop_codon Khc FlyBase G18192.1 AGATCCAATCACCACCTGTCGCCGCCCAGTTCAGCTCCGCTTTAAACTAAACTAAATGGATTACGTTATACATACTTAACATAACTGATAATTGCCTTCGCTTAGATGAGATGTGTCGCGATCATGTGCAGCGCTTTAAATATAC 30 16267170 0.980552155 14 27 193 0.93877551 1.662757832 0.102040816 0.517241379 0.714285714 29 3 0 46 2R:16267121-16267265 7 8 911 FBgn0001308 2547 83.14 127.7566667 0.00314095 0.096223238 0.062619041 10 9 9.5 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 2R 16532631 16532636 + 2R_16532631_16532636_+ 0.79339067 0.92883857 0.86111462 0.095776129 Sema-2a FBtr0087089|FBtr0345339|FBtr0087090|FBtr0087088 16532399|16532399|16532399|16532399 16533428|16533428|16533428|16533459 2R + 16532523 16532698 5'utr Sema-2a FlyBase G16473.1 ATAATCATTATTATCAGCGACATCATCATAGACATACTTTCTTCAGCAATGAACAGAAAACTCTTCCTAAAGGATTATGCATTTACCGAAGCATTTACAATGCATCCATTGACTTAGACTTAGACATTAGGGTATTATCGCATGACACAGCTCCTCCCATACGGTGCAATTCACCC 30 16532632 0.979991457 14 29 205 0.974358974 1.579783597 0.102564103 0.266666667 0.435897436 30 1 0 38 2R:16532523-16532698 6 Sema-2a FBtr0087088|FBtr0087090|FBtr0345339|FBtr0087089 16532399|16532399|16532399|16532399 16533459|16533428|16533428|16533428 TTGACT 6mer3-8 dme-miR-1012-3p 2R + 16532621 16532679 5'utr Sema-2a FlyBase G12515.1 AATGCATCCATTGACTTAGACTTAGACATTAGGGTATTATCGCATGACACAGCTCCTCC 10 16532635 0.975327284 5 9 67 1 1.278753601 0.157894737 0.6 0.789473684 10 0 0 19 2R:16532621-16532679 6 9.5 912 FBgn0011260 1008.703333 35.04333333 54.17 0.009418032 0.271092933 0.175373823 -1 -4 -2.5 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 16533360 16533367 + 2R_16533360_16533367_+ 0.441699648 0.448898732 0.44529919 0.005090532 Sema-2a FBtr0087089|FBtr0345339|FBtr0087090|FBtr0087088 16532399|16532399|16532399|16532399 16533428|16533428|16533428|16533459 2R + 16533334 16533379 5'utr Sema-2a FlyBase G16474.1 TGACTTGCACTCTCTTCACACTAAATGTACTTAAGGTAATTTGCAA 44 16533359 0.830129931 3 43 337 0.980392157 1.698970004 0.019607843 0.136363636 0.254901961 44 1 0 50 2R:16533334-16533379 8 Sema-2a FBtr0087088|FBtr0087090|FBtr0345339|FBtr0087089 16532399|16532399|16532399|16532399 16533459|16533428|16533428|16533428 GTACTTAA 8mer-A1 dme-miR-252-5p 2R + 16533329 16533428 5'utr Sema-2a FlyBase G12516.1 TTTAGTGACTTGCACTCTCTTCACACTAAATGTACTTAAGGTAATTTGCAAAAATCTTTAGTTCTTAAGCGTTTAGTTATAATAAAATGAGACAAAAACC 34 16533359 0.99907015 6 33 241 0.978723404 1.662757832 0 0.294117647 0.489361702 34 1 0 46 2R:16533329-16533428 8 34 913 FBgn0011260 1008.703333 35.04333333 54.17 0.03370664 0.970227338 0.627653683 1 1 1 0.2 dme-miR-276a-3p 6mer2-7 GTTCCT 2R 16585157 16585162 + 2R_16585157_16585162_+ 0.999811341 0.999992075 0.999901708 0.000127845 Cdk4 FBtr0340063|FBtr0345340|FBtr0087103|FBtr0087104|FBtr0087102 16585034|16585034|16585034|16585034|16585034 16585448|16585448|16585448|16585448|16585448 2R + 16584952 16585184 stop_codon Cdk4 FlyBase G16478.1 AAAATGCTTTCCTACGACCTCCACCTGCGACCATCCGCCTTGGCCTGTTTGGAGCACGATTACTTTCAGCAGGAACCCCTATAGTCTCGATGCCCAGAAGGATAATGGATAATGGATTATGGATTATGGATTATGGATTATGGATGTGGAAGTGAAAGTGGCAGTGGACTGATCATTGCGGCCGCGCTTCGTTCTTGTTACCAATGTTCCTTTAAGTGTAGTGAAGCATTTTG 172 16585156 0.870702173 30 169 1631 0.984615385 1.806179974 0.517948718 0.11627907 0.220512821 172 1 2 192 2R:16584952-16585184 6 Cdk4 FBtr0087102|FBtr0340063|FBtr0345340|FBtr0087103|FBtr0087104 16585034|16585034|16585034|16585034|16585034 16585448|16585448|16585448|16585448|16585448 GTTCCT 6mer2-7 dme-miR-276a-3p 2R + 16585129 16585180 3'utr Cdk4 FlyBase G12519.2 GCGGCCGCGCTTCGTTCTTGTTACCAATGTTCCTTTAAGTGTAGTGAAGCAT 81 16585157 0.709733468 7 79 839 0.992 1.792391689 0.368 0.382716049 0.6 81 0 1 124 2R:16585129-16585180 6 107 914 FBgn0016131 414.8133333 26.95666667 40.80666667 0.25794735 3.969333498 2.622120569 1 0 0.5 0.2 dme-miR-34-5p 6mer2-7 ACTGCC 2R 16585285 16585290 + 2R_16585285_16585290_+ 0.880138784 0.471693833 0.675916308 0.288814229 Cdk4 FBtr0340063|FBtr0345340|FBtr0087103|FBtr0087104|FBtr0087102 16585034|16585034|16585034|16585034|16585034 16585448|16585448|16585448|16585448|16585448 2R + 16585257 16585337 3'utr Cdk4 FlyBase G16479.1 TTGTAGTCGTAAGTTAAGTGTGAATACTACTGCCGATCAACTATCTGATGACCATTACATGTGAAACGATTCTCGAGGGCG 26 16585284 0.719682314 10 24 139 0.966666667 1.462397998 0.233333333 0.153846154 0.266666667 26 1 0 29 2R:16585257-16585337 6 Cdk4 FBtr0087102|FBtr0340063|FBtr0345340|FBtr0087103|FBtr0087104 16585034|16585034|16585034|16585034|16585034 16585448|16585448|16585448|16585448|16585448 ACTGCC 6mer2-7 dme-miR-34-5p 2R + 16585254 16585325 3'utr Cdk4 FlyBase G12520.1 TGTTTGTAGTCGTAAGTTAAGTGTGAATACTACTGCCGATCAACTATCTGATGACCATTACATGTGAAACGA 16 16585284 0.79437325 6 14 88 0.941176471 1.204119983 0.058823529 0.0625 0.117647059 16 1 0 16 2R:16585254-16585325 6 15 915 FBgn0016131 414.8133333 26.95666667 40.80666667 0.036160843 0.556448621 0.367586996 1 1 1 0.2 dme-miR-14-3p 8mer-A1 AAGACTGA 2R 16791590 16791597 + 2R_16791590_16791597_+ 0.547641615 0.573752575 0.560697095 0.018463265 CG5522 FBtr0087030|FBtr0087029|FBtr0087031|FBtr0087028|FBtr0087026 16791350|16791350|16791350|16791350|16791350 16792472|16792472|16792472|16792472|16792472 2R + 16791477 16791638 3'utr CG5522 FlyBase G16511.1 ACATCGCTCACTCACTCCCTGAAACGAGGCAACCACAGAACATTCCCGCAACCACAACGAACGAACAAATTGCAGCTTGCATCAGATGAATCGATTTCAAAATGGTATTTCAAAAGACTGACACCGAATGAGAACACGAAGATATAGTAAAGGAGGAGCAGT 357 16791584 0.935187844 20 326 1563 0.920187793 1.639043558 0.241784038 0.145658263 0.284037559 357 26 8 392 2R:16791477-16791638 8 CG5522 FBtr0087026|FBtr0087031|FBtr0087028|FBtr0087030|FBtr0087029 16791350|16791350|16791350|16791350|16791350 16792472|16792472|16792472|16792472|16792472 AAGACTGA 8mer-A1 dme-miR-14-3p 2R + 16791435 16791628 3'utr CG5522 FlyBase G12555.2 CCTTGAAACGTGCACAGCCAAAAAAAAAAACACCCACCCACCACATCGCTCACTCACTCCCTGAAACGAGGCAACCACAGAACATTCCCGCAACCACAACGAACGAACAAATTGCAGCTTGCATCAGATGAATCGATTTCAAAATGGTATTTCAAAAGACTGACACCGAATGAGAACACGAAGATATAGTAAAG 275 16791584 0.964070358 18 243 1174 0.886419753 1.709996409 0.212345679 0.345454545 0.555555556 275 40 6 359 2R:16791435-16791628 8 184.5 916 FBgn0034158 1968.163333 68.45666667 105.0966667 0.09374222 2.695135609 1.755526658 6 6 6 0.2 dme-miR-263a-5p 8mer-A1 GTGCCATA 2R 16792035 16792042 + 2R_16792035_16792042_+ 0.575767223 0.564640791 0.570204007 0.007867553 CG5522 FBtr0087030|FBtr0087029|FBtr0087031|FBtr0087028|FBtr0087026 16791350|16791350|16791350|16791350|16791350 16792472|16792472|16792472|16792472|16792472 2R + 16792015 16792057 3'utr CG5522 FlyBase G16513.1 AACTTAATTTTGCGCAGACTGTGCCATATTAGTTTATAAATTT 37 16792050 0.710439854 10 17 398 0.454545455 0.823908741 0 0.189189189 0.318181818 37 22 2 20 2R:16792015-16792057 8 CG5522 FBtr0087026|FBtr0087031|FBtr0087028|FBtr0087030|FBtr0087029 16791350|16791350|16791350|16791350|16791350 16792472|16792472|16792472|16792472|16792472 GTGCCATA 8mer-A1 dme-miR-263a-5p 2R + 16792020 16792092 3'utr CG5522 FlyBase G12557.1 AATTTTGCGCAGACTGTGCCATATTAGTTTATAAATTTATGTGTCTACACAAACACTGTTGGCCAGCAAACGA 22 16792047 0.992254127 11 14 194 0.653846154 0.753327667 0.038461538 0.136363636 0.269230769 22 7 2 17 2R:16792020-16792092 8 26.5 917 FBgn0034158 1968.163333 68.45666667 105.0966667 0.01346433 0.387106199 0.252148815 -15 -12 -13.5 0.2 dme-miR-79-3p 6mer2-7 AGCTTT 2R 16792374 16792379 + 2R_16792374_16792379_+ 0.505843454 0.753981829 0.629912641 0.175460275 CG5522 FBtr0087030|FBtr0087029|FBtr0087031|FBtr0087028|FBtr0087026 16791350|16791350|16791350|16791350|16791350 16792472|16792472|16792472|16792472|16792472 2R + 16792328 16792450 3'utr CG5522 FlyBase G16516.1 GTTAGTGTTTCTTTTTTTCGGTTGAGAAATTGAATTGTAACACCTAAGCTTTGTCACACATACAGATTATCATTTGCAGTGTTTTACATTACATTTAAGAAAGAAATGCAACAAAAACAAAAT 42 16792372 0.985597933 17 42 346 1 1.72427587 0.20754717 0.19047619 0.358490566 42 0 0 53 2R:16792328-16792450 6 CG5522 FBtr0087026|FBtr0087031|FBtr0087028|FBtr0087030|FBtr0087029 16791350|16791350|16791350|16791350|16791350 16792472|16792472|16792472|16792472|16792472 AGCTTT 6mer2-7 dme-miR-79-3p 2R + 16792295 16792445 3'utr CG5522 FlyBase G12559.1 ATGCATGCGTAAATTATAGGAAACGAAAGTAATGTTAGTGTTTCTTTTTTTCGGTTGAGAAATTGAATTGTAACACCTAAGCTTTGTCACACATACAGATTATCATTTGCAGTGTTTTACATTACATTTAAGAAAGAAATGCAACAAAAAC 37 16792372 0.985890371 17 35 292 0.942307692 1.69019608 0.096153846 0.324324324 0.519230769 37 3 0 49 2R:16792295-16792445 6 19.5 918 FBgn0034158 1968.163333 68.45666667 105.0966667 0.009907714 0.284851731 0.185543468 2 2 2 0.2 dme-miR-970-3p 6mer3-8 TCTTAT 2R 16860106 16860111 + 2R_16860106_16860111_+ 0.999916632 0.99998715 0.999951891 4.99E-05 Dek FBtr0100438|FBtr0100436|FBtr0100437|FBtr0332946 16859863|16859863|16859863|16859863 16860358|16860358|16860270|16861738 2R + 16860006 16860108 3'utr Dek FlyBase G16546.1 CCAAGTAGTTGTCTCCTATAAGTATATGATTTGTACTCCTATCCTAAAAGCTATCTGCAGTTCACCTTAATCCTAACGTCAGCGGCAGTCGACTATCCATTCT 26 16860084 0.789470712 15 24 173 0.945945946 1.243038049 0.189189189 0.230769231 0.459459459 26 1 1 35 2R:16860006-16860108 3 Dek FBtr0100437|FBtr0332946|FBtr0100438|FBtr0100436 16859863|16859863|16859863|16859863 16860270|16861738|16860358|16860358 TCTTAT 6mer3-8 dme-miR-970-3p 2R + 16859978 16860175 3'utr Dek FlyBase G12583.1 AGTTGGGCATGGTTCGCGAAATGTAACTCCAAGTAGTTGTCTCCTATAAGTATATGATTTGTACTCCTATCCTAAAAGCTATCTGCAGTTCACCTTAATCCTAACGTCAGCGGCAGTCGACTATCCATTCTTATATATATTCATCTGTATATATAACTTTTTATTTGTCCAACCGTGCGCACGCATGCACATCATTTT 31 16860103 0.978654424 22 29 243 0.9375 1.352182518 0.145833333 0.483870968 0.666666667 31 2 1 45 2R:16859978-16860175 6 3.5 919 FBgn0026533 3518.623333 168.86 259.8033333 0.000994707 0.02072723 0.013471729 22 3 12.5 0.2 dme-miR-304-5p 7mer-m8 TGAGATT 2R 16952530 16952536 + 2R_16952530_16952536_+ 0.620203377 0.620201702 0.620202539 1.20E-06 CG34191 FBtr0112384|FBtr0340071 16952500|16952500 16952581|16952581 2R + 16952513 16952570 3'utr CG34191 FlyBase G16563.1 CCATCTTATTTACCCTTTGAGATTTTCCCCCTTTTTGATGCTTATTAAATGTTAAACA 56 16952529 0.805840238 10 54 619 0.971830986 1.838849091 0 0.232142857 0.394366197 56 2 0 69 2R:16952513-16952570 7 CG34191 FBtr0340071|FBtr0112384 16952500|16952500 16952581|16952581 TGAGATT 7mer-m8 dme-miR-304-5p 2R + 16952511 16952567 3'utr CG34191 FlyBase G12597.1 TCCCATCTTATTTACCCTTTGAGATTTTCCCCCTTTTTGATGCTTATTAAATGTTAA 24 16952529 0.765002373 7 24 248 1 1.544068044 0.085714286 0.291666667 0.514285714 24 0 0 35 2R:16952511-16952567 7 28.5 920 FBgn0085220 88.66666667 25.16333333 38.02 0.321428571 1.132600344 0.749605471 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 17008240 17008245 - 2R_17008240_17008245_- 0.973014889 0.971024275 0.972019582 0.001407567 Ehbp1 FBtr0114628|FBtr0114628|FBtr0114628|FBtr0340073|FBtr0340073|FBtr0340073|FBtr0114627|FBtr0114627|FBtr0114627|FBtr0087019|FBtr0087019|FBtr0087019 17007904|17007904|17007904|17007672|17007672|17007672|17007904|17007904|17007904|17007904|17007904|17007904 17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454 2R - 17008151 17008270 3'utr Ehbp1 FlyBase G24181.1 TGGTTATTAAAAAAAAAAAGGTATACTGTGAAACAAAACAAATTGCTTTTGTATTTAAGCAAAACAATTCAAGAAATAAGAACAAAACGTCCGTTAGTGAACTAAGTAAAAAGACAGGCA 413 17008247 0.787176222 15 393 1581 0.958515284 2.040404529 0.034934498 0.099273608 0.187772926 413 16 3 439 2R:17008151-17008270 6 Ehbp1 FBtr0087019|FBtr0087019|FBtr0087019|FBtr0114627|FBtr0114627|FBtr0114627|FBtr0340073|FBtr0340073|FBtr0340073|FBtr0114628|FBtr0114628|FBtr0114628 17007904|17007904|17007904|17007904|17007904|17007904|17007672|17007672|17007672|17007904|17007904|17007904 17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 17008207 17008284 3'utr Ehbp1 FlyBase G18305.1 TGGACCACTTGGTATGGTTATTAAAAAAAAAAAGGTATACTGTGAAACAAAACAAATTGCTTTTGTATTTAAGCAAAA 160 17008247 0.922222315 5 156 541 0.973568282 1.645422269 0 0.3125 0.515418502 160 2 4 221 2R:17008207-17008284 6 199 921 FBgn0034180 1913.18 55.65333333 85.13666667 0.104015304 3.575706756 2.337418269 2 2 2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 17016685 17016691 - 2R_17016685_17016691_- 0.801927849 0.800975917 0.801451883 0.000673095 CG8963 FBtr0087017|FBtr0087017|FBtr0087017|FBtr0300573|FBtr0300573|FBtr0300573|FBtr0340126|FBtr0340126|FBtr0340126|FBtr0087016|FBtr0087016|FBtr0087016 17016224|17016224|17016224|17016344|17016344|17016344|17016344|17016344|17016344|17016344|17016344|17016344 17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965 2R - 17016641 17016731 3'utr CG8963 FlyBase G24205.1 AATATGACATGTGTTAATGACTTTGTTCGAACGCTTTTTGTGTGATACGCCCGTTTTGTATCTCTGATAACTAACTCTCTGCCATGATAGC 29 17016693 0.987794464 14 29 257 1 1.602059991 0.3 0.24137931 0.45 29 0 0 40 2R:17016641-17016731 7 CG8963 FBtr0340126|FBtr0340126|FBtr0340126|FBtr0087016|FBtr0087016|FBtr0087016|FBtr0087017|FBtr0087017|FBtr0087017|FBtr0300573|FBtr0300573|FBtr0300573 17016344|17016344|17016344|17016344|17016344|17016344|17016224|17016224|17016224|17016344|17016344|17016344 17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 17016663 17016715 3'utr CG8963 FlyBase G18326.1 ATGACTTTGTTCGAACGCTTTTTGTGTGATACGCCCGTTTTGTATCTCTGATA 14 17016695 0.751333013 7 13 136 0.863636364 1.278753601 0.181818182 0.428571429 0.636363636 14 3 0 19 2R:17016663-17016715 7 15.5 922 FBgn0034181 880.38 38.95666667 59.94333333 0.017606034 0.397877984 0.258577545 2 4 3 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 17016757 17016763 - 2R_17016757_17016763_- 0.705060016 0.657289261 0.681174638 0.033778986 CG8963 FBtr0087017|FBtr0087017|FBtr0087017|FBtr0300573|FBtr0300573|FBtr0300573|FBtr0340126|FBtr0340126|FBtr0340126|FBtr0087016|FBtr0087016|FBtr0087016 17016224|17016224|17016224|17016344|17016344|17016344|17016344|17016344|17016344|17016344|17016344|17016344 17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965 2R - 17016738 17016896 3'utr CG8963 FlyBase G24206.1 GGTATAGGAGGGATGGTGGAGAGCGTAGGAGTGGAGCATTTCCAACAAATTCTCGGTTGTAGGATCGATGATTGCAGTTGCTTGGTTCAGAACCAATTGTGATTATCTTTTAAATTATTGATAGCAAATTGTTTGTGATATCTTCGTGTTTCATGCACC 49 17016765 0.988369235 18 46 421 0.949152542 1.748188027 0.288135593 0.183673469 0.322033898 49 3 0 56 2R:17016738-17016896 7 CG8963 FBtr0340126|FBtr0340126|FBtr0340126|FBtr0087016|FBtr0087016|FBtr0087016|FBtr0087017|FBtr0087017|FBtr0087017|FBtr0300573|FBtr0300573|FBtr0300573 17016344|17016344|17016344|17016344|17016344|17016344|17016224|17016224|17016224|17016344|17016344|17016344 17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 17016736 17016780 3'utr CG8963 FlyBase G18327.1 ATTGATAGCAAATTGTTTGTGATATCTTCGTGTTTCATGCACCTA 21 17016765 0.989504091 7 21 207 1 1.531478917 0.264705882 0.476190476 0.676470588 21 0 0 34 2R:17016736-17016780 7 24 923 FBgn0034181 880.38 38.95666667 59.94333333 0.027260955 0.616069137 0.400378135 2 2 2 0.2 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 17024875 17024880 + 2R_17024875_17024880_+ 0.762201074 0.986883009 0.874542042 0.158874095 Dark FBtr0086967 17023336 17026703 2R + 17024852 17024895 3'utr Dark FlyBase G16606.1 CCAGAGAGCGGACGCAACTTCTGGCTGTGGACTCCAAGGAGCGC 10 17024873 0.959727336 2 10 49 1 1 0.2 0 0 10 0 0 10 2R:17024852-17024895 6 Dark FBtr0086967 17023336 17026703 GCTGTG 6mer2-7 dme-miR-1008-3p 2R + 17024851 17024895 3'utr Dark FlyBase G12629.1 ACCAGAGAGCGGACGCAACTTCTGGCTGTGGACTCCAAGGAGCGC 5 17024873 0.94947794 2 5 22 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 2R:17024851-17024895 6 7.5 924 FBgn0263864 792.71 19.97666667 30.85666667 0.009461215 0.375438011 0.243059306 2 2 2 0.2 dme-miR-283-5p 7mer-m8 TGATATT 2R 17025158 17025164 + 2R_17025158_17025164_+ 0.565253204 0.584587553 0.574920379 0.013671485 Dark FBtr0086967 17023336 17026703 2R + 17025100 17025178 3'utr Dark FlyBase G16608.1 CTCAAACAGGTCAGTCCCAACATTCTGGTGGCGTCGGCACACAGTGCCCAGAAGACTGTGATATTCCAGCTGGAAAAGA 23 17025162 0.96525622 7 22 117 0.964285714 1.130333768 0.142857143 0.173913043 0.321428571 23 0 1 27 2R:17025100-17025178 7 Dark FBtr0086967 17023336 17026703 TGATATT 7mer-m8 dme-miR-283-5p 2R + 17025111 17025177 3'utr Dark FlyBase G12631.1 CAGTCCCAACATTCTGGTGGCGTCGGCACACAGTGCCCAGAAGACTGTGATATTCCAGCTGGAAAAG 16 17025162 0.952402022 6 16 73 1 1.431363764 0.222222222 0.375 0.62962963 16 0 0 27 2R:17025111-17025177 7 17 925 FBgn0263864 792.71 19.97666667 30.85666667 0.021445421 0.850992825 0.550934428 -4 -4 -4 0.2 dme-miR-283-5p 6mer3-8 TGATAT 2R 17026612 17026617 + 2R_17026612_17026617_+ 0.958155799 0.989961692 0.974058745 0.022490168 Dark FBtr0086968|FBtr0086967 17026427|17023336 17026703|17026703 2R + 17026598 17026634 3'utr Dark FlyBase G16611.1 CAGCTAACCAAGTATGATATCTCAGAGGGCGGTGGGT 11 17026612 0.749278143 2 10 57 0.923076923 1.079181246 0.692307692 0.181818182 0.307692308 11 1 0 12 2R:17026598-17026634 6 Dark FBtr0086968|FBtr0086967 17026427|17023336 17026703|17026703 TGATAT 6mer3-8 dme-miR-283-5p 2R + 17026595 17026637 3'utr Dark FlyBase G12633.1 ATGCAGCTAACCAAGTATGATATCTCAGAGGGCGGTGGGTGCG 8 17026612 0.762766389 3 8 45 1 1.113943352 0.769230769 0.5 0.692307692 8 0 0 13 2R:17026595-17026637 6 9.5 926 FBgn0263864 792.71 19.97666667 30.85666667 0.011984206 0.475554814 0.307875122 0 0 0 0.2 dme-miR-968-5p 6mer3-8 ACTACT 2R 17044445 17044450 + 2R_17044445_17044450_+ 0.988921153 0.971966277 0.980443715 0.011988925 RhoGEF2 FBtr0086969|FBtr0086970|FBtr0305083|FBtr0340124|FBtr0086971 17044319|17044319|17044319|17044319|17044319 17044653|17044653|17044653|17044653|17044653 2R + 17044421 17044542 3'utr RhoGEF2 FlyBase G16657.1 AGCCTTTCTTAGAGCATGCCTTTTACTACTGTTAATGTAGCTTCATTTGTTTTCTTAAAATATTATGTATTCCACAAGAGCCGATAACACTTTAAATTAAGTCTAACATTGTCCCCTCGTAA 27 17044441 0.840200575 14 27 195 1 1.462397998 0.068965517 0.074074074 0.137931034 27 0 0 29 2R:17044421-17044542 6 RhoGEF2 FBtr0086969|FBtr0086971|FBtr0340124|FBtr0305083|FBtr0086970 17044319|17044319|17044319|17044319|17044319 17044653|17044653|17044653|17044653|17044653 ACTACT 6mer3-8 dme-miR-968-5p 2R + 17044416 17044451 3'utr RhoGEF2 FlyBase G12669.1 CGAGTAGCCTTTCTTAGAGCATGCCTTTTACTACTG 11 17044442 0.690506111 4 9 93 0.875 0.84509804 0.1875 0.272727273 0.5 11 1 1 14 2R:17044416-17044451 6 8 927 FBgn0023172 2916.61 41.36666667 63.45333333 0.00274291 0.193392425 0.126076907 4 3 3.5 0.2 dme-miR-988-3p 7mer-m1 CAAGGGG 2R 17059422 17059428 - 2R_17059422_17059428_- 0.521444207 0.483375621 0.502409914 0.026918565 CG8950 FBtr0306810 17059329 17059943 2R - 17059421 17059445 3'utr CG8950 FlyBase G24223.1 AGAAAGCTTTAAGTGATCAAGGGGA 6 17059436 0.563147404 4 6 24 1 0.77815125 0 0 0 6 0 0 6 2R:17059421-17059445 7 CG8950 FBtr0306810 17059329 17059943 CAAGGGG 7mer-m1 dme-miR-988-3p 2R - 17059419 17059447 3'utr CG8950 FlyBase G18344.1 CTAGAAAGCTTTAAGTGATCAAGGGGAAA 6 17059436 0.776191181 4 6 27 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 2R:17059419-17059447 7 5.5 928 FBgn0034186 159.6633333 6.763333333 10.41 0.034447483 0.813208477 0.528338136 8 8 8 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 17092972 17092979 + 2R_17092972_17092979_+ 0.625364255 0.625355506 0.62535988 6.22E-06 CG6984 FBtr0086979 17092926 17093070 2R + 17092942 17092992 3'utr CG6984 FlyBase G16685.1 ATGAAATAATGAATCAAAACTGACCAATTGTGCATTTATACTTTTAAGCTT 29 17092970 0.853743806 8 28 236 1 1.544068044 0 0.172413793 0.314285714 29 0 0 35 2R:17092942-17092992 8 CG6984 FBtr0086979 17092926 17093070 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 17092944 17093002 3'utr CG6984 FlyBase G12690.1 GAAATAATGAATCAAAACTGACCAATTGTGCATTTATACTTTTAAGCTTGAATTGTCCA 22 17092969 0.991127551 9 20 210 0.9375 1.176091259 0.09375 0.409090909 0.59375 22 1 1 30 2R:17092944-17093002 8 23 929 FBgn0034191 139.3066667 16.87666667 25.83666667 0.165103369 1.362828363 0.890207715 2 3 2.5 0.2 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2R 17139564 17139570 - 2R_17139564_17139570_- 0.708773304 0.623964916 0.66636911 0.059968595 CG43103 FBtr0304891|FBtr0304891 17139448|17139448 17139638|17139638 2R - 17139565 17139604 3'utr CG43103 FlyBase G24240.1 TATCAGAACGTGCTACAAGCTGTGTTTTTATTGATACTTA 10 17139578 0.834868946 6 10 100 1 1.204119983 0 0.4 0.625 10 0 0 16 2R:17139565-17139604 5 CG43103 FBtr0304891|FBtr0304891 17139448|17139448 17139638|17139638 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2R - 17139565 17139633 3'utr CG43103 FlyBase G18355.1 CAAGCTCTGAAGATCGATTTAAAGTTCAATATCAGAACGTGCTACAAGCTGTGTTTTTATTGATACTTA 11 17139579 0.758944397 8 11 88 1 1.079181246 0.25 0.090909091 0.166666667 11 0 0 12 2R:17139565-17139633 5 2.5 930 FBgn0262563 14 4.063333333 6.323333333 0.178571429 0.615258409 0.395361096 8 9 8.5 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 17364026 17364033 + 2R_17364026_17364033_+ 0.490458745 0.491394273 0.490926509 0.000661569 mbl FBtr0336940|FBtr0306604|FBtr0306606|FBtr0306603|FBtr0336941|FBtr0306601|FBtr0336942 17363985|17363985|17363985|17363985|17363985|17363985|17363985 17365386|17365386|17365386|17365386|17365386|17365386|17365386 2R + 17363975 17364093 stop_codon mbl FlyBase G16726.1 AAGACCTCCTAAGAACCCGGGCGATAACAATCTAAAAGTCCAAACACAACTGTACTTAATGCACCAAGCCATCGAACAGATGGAATAGTCACACCATTTTAGATTTATAGATATAAACA 304 17364025 0.959092407 10 299 1403 0.986072423 2.549003262 0.08356546 0.138157895 0.270194986 304 5 0 354 2R:17363975-17364093 8 mbl FBtr0336942|FBtr0306603|FBtr0336941|FBtr0306601|FBtr0306604|FBtr0306606|FBtr0336940 17363985|17363985|17363985|17363985|17363985|17363985|17363985 17365386|17365386|17365386|17365386|17365386|17365386|17365386 GTACTTAA 8mer-A1 dme-miR-252-5p 2R + 17364000 17364092 3'utr mbl FlyBase G12713.1 AACAATCTAAAAGTCCAAACACAACTGTACTTAATGCACCAAGCCATCGAACAGATGGAATAGTCACACCATTTTAGATTTATAGATATAAAC 195 17364025 0.892764008 6 188 905 0.967213115 2.16879202 0.101639344 0.394871795 0.613114754 195 9 1 295 2R:17364000-17364092 8 239 931 FBgn0265487 1263.543333 28.89333333 44.05 0.189150616 8.271804338 5.425652667 1 1 1 0.2 dme-miR-999-3p 7mer-m8 AGTTAAC 2R 17364465 17364471 + 2R_17364465_17364471_+ 0.673395007 0.624946554 0.64917078 0.034258192 mbl FBtr0336940|FBtr0306604|FBtr0306606|FBtr0306603|FBtr0336941|FBtr0306601|FBtr0336942 17363985|17363985|17363985|17363985|17363985|17363985|17363985 17365386|17365386|17365386|17365386|17365386|17365386|17365386 2R + 17364410 17364486 3'utr mbl FlyBase G16728.1 GAGAAACAGATGTTAGATGATAGTAATACTTAAGTTCCTTTTTTGAATAGCTCTTAGTTAACTCTAGTTTATAGGAA 10 17364463 0.937767874 7 9 97 0.916666667 1.041392685 0 0.2 0.333333333 10 1 0 11 2R:17364410-17364486 7 mbl FBtr0336942|FBtr0306603|FBtr0336941|FBtr0306601|FBtr0306604|FBtr0306606|FBtr0336940 17363985|17363985|17363985|17363985|17363985|17363985|17363985 17365386|17365386|17365386|17365386|17365386|17365386|17365386 AGTTAAC 7mer-m8 dme-miR-999-3p 2R + 17364397 17364496 3'utr mbl FlyBase G12716.1 CAAGCGAACGGAAGAGAAACAGATGTTAGATGATAGTAATACTTAAGTTCCTTTTTTGAATAGCTCTTAGTTAACTCTAGTTTATAGGAAACGGTCACAC 11 17364449 0.989237958 8 10 93 1 1.176091259 0 0.363636364 0.533333333 11 0 0 15 2R:17364397-17364496 7 4 932 FBgn0265487 1263.543333 28.89333333 44.05 0.003165701 0.13844024 0.090805902 2 16 9 0.2 dme-miR-184-3p 6mer2-7 CCGTCC 2R 17364695 17364700 + 2R_17364695_17364700_+ 0.994320887 0.998141779 0.996231333 0.002701784 mbl FBtr0336940|FBtr0306604|FBtr0306606|FBtr0306603|FBtr0336941|FBtr0306601|FBtr0336942 17363985|17363985|17363985|17363985|17363985|17363985|17363985 17365386|17365386|17365386|17365386|17365386|17365386|17365386 2R + 17364617 17364722 3'utr mbl FlyBase G16730.1 AAACCTCTAATGCTGCTGCCGATGCTGGGTACAGTTGTGTATGCTTGTTGCTAGCTGCGGGTGCTTAATGCCATATTGCCGTCCCTGTCTCCCAAATGCGGTAGTT 165 17364693 0.768736806 15 159 1188 0.969543147 1.803912113 0.147208122 0.145454545 0.284263959 165 4 2 191 2R:17364617-17364722 6 mbl FBtr0336942|FBtr0306603|FBtr0336941|FBtr0306601|FBtr0306604|FBtr0306606|FBtr0336940 17363985|17363985|17363985|17363985|17363985|17363985|17363985 17365386|17365386|17365386|17365386|17365386|17365386|17365386 CCGTCC 6mer2-7 dme-miR-184-3p 2R + 17364679 17364721 3'utr mbl FlyBase G12718.1 GCTTAATGCCATATTGCCGTCCCTGTCTCCCAAATGCGGTAGT 62 17364693 0.745579698 5 58 426 0.947916667 1.959041392 0.135416667 0.370967742 0.59375 62 5 0 91 2R:17364679-17364721 6 104 933 FBgn0265487 1263.543333 28.89333333 44.05 0.082308218 3.599446239 2.360953462 2 2 2 0.2 dme-miR-7-5p 7mer-m8 GTCTTCC 2R 17414419 17414425 - 2R_17414419_17414425_- 0.705950275 0.705923144 0.70593671 1.92E-05 cnk FBtr0086962|FBtr0340214 17413968|17413968 17414572|17414572 2R - 17414401 17414476 3'utr cnk FlyBase G24265.1 ATATAGCGATATTCTCGTACGATTTAGGTATACAACTTGTTCATTTTGATCGTCTTCCCTGTCTGTCCACCAGAAA 93 17414422 0.697757003 14 89 1018 0.963302752 1.720159303 0.220183486 0.150537634 0.275229358 93 3 1 105 2R:17414401-17414476 7 cnk FBtr0086962|FBtr0340214 17413968|17413968 17414572|17414572 GTCTTCC 7mer-m8 dme-miR-7-5p 2R - 17414402 17414486 3'utr cnk FlyBase G18369.1 TATATATTATATATAGCGATATTCTCGTACGATTTAGGTATACAACTTGTTCATTTTGATCGTCTTCCCTGTCTGTCCACCAGAA 65 17414422 0.991835438 14 65 715 1 1.986771734 0.206185567 0.369230769 0.577319588 65 0 0 97 2R:17414402-17414486 7 73.5 934 FBgn0021818 1145.12 24.51333333 37.43 0.064185413 2.998368235 1.963665509 -3 -3 -3 0.2 dme-miR-184-5p 6mer3-8 TGATAA 2R 17448658 17448663 - 2R_17448658_17448663_- 0.922241376 0.997233595 0.959737485 0.053027493 mthl3 FBtr0340211|FBtr0340212|FBtr0086955 17448531|17448531|17448531 17449117|17449117|17449117 2R - 17448608 17448823 3'utr mthl3 FlyBase G24317.1 GTGCCATCAAAGCGAGATCAAAGCAACTACTACATGGGGATATGTACGAATCTTATAGGCATGAATACTCGGCATTTATATACCCTGGTCTATTATTATGGATGGAGGATAAAAACTCAGGAAAATACTTTTCGCATCAGCACTTATGTATGCTCACTCGTGATAATAATTTCGTAATAATTCGTACTGTTTTTACTGCCTCAACTTAATTCAAAG 61 17448657 0.971349439 24 58 411 0.961038961 1.86923172 0.233766234 0.196721311 0.363636364 61 3 0 74 2R:17448608-17448823 6 mthl3 FBtr0086955|FBtr0340212|FBtr0340211 17448531|17448531|17448531 17449117|17449117|17449117 TGATAA 6mer3-8 dme-miR-184-5p 2R - 17448646 17448790 3'utr mthl3 FlyBase G18404.1 ATGGGGATATGTACGAATCTTATAGGCATGAATACTCGGCATTTATATACCCTGGTCTATTATTATGGATGGAGGATAAAAACTCAGGAAAATACTTTTCGCATCAGCACTTATGTATGCTCACTCGTGATAATAATTTCGTAAT 28 17448693 0.949251958 19 25 189 0.948717949 1.091080469 0.102564103 0.321428571 0.512820513 28 0 2 37 2R:17448646-17448790 6 20.5 935 FBgn0028956 336.38 20.09333333 30.48333333 0.060942981 1.020238885 0.672498633 -6 30 12 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT 2R 17465345 17465351 + 2R_17465345_17465351_+ 0.615934202 0.60349888 0.609716541 0.008793085 CG14478 FBtr0345418|FBtr0086921|FBtr0086922|FBtr0345417 17464232|17464232|17464232|17464232 17465795|17465580|17465580|17465580 2R + 17465323 17465372 3'utr CG14478 FlyBase G16790.1 TTCCTTGACTACCACCACCCATGGCAGCTTCCTGGGAGCTCCATTGGGGG 51 17465344 0.985752785 2 49 222 0.946428571 1.72427587 0.142857143 0.098039216 0.178571429 51 3 0 53 2R:17465323-17465372 7 CG14478 FBtr0345417|FBtr0086922|FBtr0086921|FBtr0345418 17464232|17464232|17464232|17464232 17465580|17465580|17465580|17465795 GGCAGCT 7mer-m8 dme-miR-980-3p 2R + 17465315 17465365 3'utr CG14478 FlyBase G12770.1 ACGCAAACTTCCTTGACTACCACCACCCATGGCAGCTTCCTGGGAGCTCCA 30 17465344 0.99460853 3 30 130 1 1.612783857 0.12195122 0.366666667 0.536585366 30 0 0 41 2R:17465315-17465365 7 39.5 936 FBgn0028953 686.9066667 21.63 33.22666667 0.057504173 1.82616736 1.188804173 1 1 1 0.2 dme-miR-304-5p 8mer-A1 TGAGATTA 2R 17473681 17473688 + 2R_17473681_17473688_+ 0.624939599 0.625294621 0.62511711 0.000251023 qkr54B FBtr0306248|FBtr0331464 17472244|17473146 17474648|17475129 2R + 17473656 17473703 3'utr qkr54B FlyBase G16798.1 TGACGGTCGGTAGAGACAGAATCTATGAGATTAATTAACTTAATAGAA 14 17473681 0.981784032 2 14 95 1 1.278753601 0 0.214285714 0.421052632 14 0 0 19 2R:17473656-17473703 8 qkr54B FBtr0306248|FBtr0331464 17472244|17473146 17474648|17475129 TGAGATTA 8mer-A1 dme-miR-304-5p 2R + 17473656 17473704 3'utr qkr54B FlyBase G12775.1 TGACGGTCGGTAGAGACAGAATCTATGAGATTAATTAACTTAATAGAAT 10 17473681 0.783293786 3 8 68 0.714285714 0.698970004 0 0.2 0.428571429 10 3 1 10 2R:17473656-17473704 8 10 937 FBgn0022987 869.43 42.83333333 65.55 0.011501789 0.233463035 0.152555301 0 0 0 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 17517269 17517276 + 2R_17517269_17517276_+ 0.499334359 0.499913361 0.49962386 0.000409415 CG4853 FBtr0340216|FBtr0086938|FBtr0086939 17517103|17517103|17517103 17517445|17517445|17517445 2R + 17517246 17517282 3'utr CG4853 FlyBase G16812.1 ACTTCCACTGTGTTTGTTAATTTGTACTTAAGCTTAG 17 17517268 0.755638286 4 17 189 1 1.278753601 0.157894737 0.117647059 0.210526316 17 0 0 19 2R:17517246-17517282 8 CG4853 FBtr0086939|FBtr0340216|FBtr0086938 17517103|17517103|17517103 17517445|17517445|17517445 GTACTTAA 8mer-A1 dme-miR-252-5p 2R + 17517231 17517289 3'utr CG4853 FlyBase G12784.1 AATAATAACTCTTACACTTCCACTGTGTTTGTTAATTTGTACTTAAGCTTAGACGACGG 18 17517268 0.855340985 6 17 161 0.962962963 1.414973348 0.259259259 0.388888889 0.592592593 18 1 0 26 2R:17517231-17517289 8 16 938 FBgn0034230 943.6633333 39.8 60.59666667 0.016955199 0.40201005 0.264040926 1 1 1 0.2 dme-miR-965-3p 8mer-A1 TACGCTTA 2R 17555736 17555743 + 2R_17555736_17555743_+ 0.577735538 0.585486996 0.581611267 0.005481138 MESR4 FBtr0086946|FBtr0113090|FBtr0340220|FBtr0340219 17555653|17555653|17555653|17555653 17556289|17556289|17556289|17556289 2R + 17555705 17555792 3'utr MESR4 FlyBase G16855.2 CTATAACTACAAACCCCACTACAGAATGGATTACGCTTATTAATTGATAAAAACATATAGTCGCTCATCCCTGGCGATCGTCTAAGGA 1513 17555735 0.834839678 14 1488 12703 0.983954155 2.535800291 0.026361032 0.134170522 0.249283668 1513 24 4 1717 2R:17555705-17555792 8 MESR4 FBtr0340219|FBtr0340220|FBtr0113090|FBtr0086946 17555653|17555653|17555653|17555653 17556289|17556289|17556289|17556289 TACGCTTA 8mer-A1 dme-miR-965-3p 2R + 17555655 17555797 3'utr MESR4 FlyBase G12825.1 ATGAACACGGATTAACTGCATCATTGGTTCCTCCTACCACAAATAAACAACTATAACTACAAACCCCACTACAGAATGGATTACGCTTATTAATTGATAAAAACATATAGTCGCTCATCCCTGGCGATCGTCTAAGGATAAGA 808 17555735 0.825484833 20 790 6518 0.981974922 2.49589108 0.028996865 0.403465347 0.622257053 808 20 3 1253 2R:17555655-17555797 8 1144.5 939 FBgn0034240 1589.276667 23.95 36.81 0.720138931 47.78705637 31.09209454 1 1 1 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT 2R 17572155 17572161 + 2R_17572155_17572161_+ 0.649833389 0.648213205 0.649023297 0.001145654 POSH FBtr0086828 17572001 17572322 2R + 17572120 17572180 3'utr POSH FlyBase G16875.1 AAAAAGAAACCGTTTTGTACTCTTCCAATCGAATGGGCAGCTCGCCGTTGTACTTTTTTAT 94 17572153 0.934780543 9 90 665 0.951456311 1.991226076 0.330097087 0.085106383 0.165048544 94 5 0 98 2R:17572120-17572180 7 POSH FBtr0086828 17572001 17572322 GGCAGCT 7mer-m8 dme-miR-980-3p 2R + 17572127 17572179 3'utr POSH FlyBase G12838.1 AACCGTTTTGTACTCTTCCAATCGAATGGGCAGCTCGCCGTTGTACTTTTTTA 71 17572153 0.931401221 9 67 478 0.942307692 1.514104821 0.182692308 0.338028169 0.548076923 71 4 2 98 2R:17572127-17572179 7 76.5 940 FBgn0040294 488.92 18.72 28.71333333 0.156467316 4.086538462 2.664267472 2 2 2 0.2 dme-miR-305-3p 6mer2-7 TGTGCC 2R 17572279 17572284 + 2R_17572279_17572284_+ 0.898124538 0.760234086 0.829179312 0.097503237 POSH FBtr0086828 17572001 17572322 2R + 17572227 17572320 3'utr POSH FlyBase G16876.1 GTTACTTAAGCCTTAGCGATTAGTTAGCTAGAGAAATAATCTAACCGATCCTTGTGCCCTCTACAAAGTTATTTGTAATATACGATACTCAGTA 32 17572279 0.71423791 11 30 209 0.948717949 1.091080469 0.128205128 0.1875 0.333333333 32 0 2 37 2R:17572227-17572320 6 POSH FBtr0086828 17572001 17572322 TGTGCC 6mer2-7 dme-miR-305-3p 2R + 17572261 17572296 3'utr POSH FlyBase G12839.1 AATAATCTAACCGATCCTTGTGCCCTCTACAAAGTT 11 17572280 0.703449157 2 11 63 1 1.230448921 0.352941176 0.454545455 0.647058824 11 0 0 17 2R:17572261-17572296 6 16 941 FBgn0040294 488.92 18.72 28.71333333 0.03272519 0.854700855 0.557232412 0 -1 -0.5 0.2 dme-miR-305-3p 8mer-m1 ATGTGCCG 2R 17573205 17573212 + 2R_17573205_17573212_+ 0.628711716 0.626293567 0.627502642 0.001709855 CG42239 FBtr0290307 17573200 17573330 2R + 17573156 17573220 stop_codon CG42239 FlyBase G16880.1 TAATTGCTATCAAGACTACGAACCAGAGAAGCAAAAGGATACGTAGACTATGTGCCGGGTTGGAT 23 17573206 0.750190263 11 22 103 0.96 1.380211242 0.36 0.086956522 0.16 23 1 0 24 2R:17573156-17573220 8 CG42239 FBtr0290307 17573200 17573330 ATGTGCCG 8mer-m1 dme-miR-305-3p 2R + 17573179 17573226 stop_codon CG42239 FlyBase G12841.2 CAGAGAAGCAAAAGGATACGTAGACTATGTGCCGGGTTGGATTACCAG 32 17573206 0.636370999 5 30 147 0.9375 1.352182518 0.395833333 0.375 0.583333333 32 2 1 45 2R:17573179-17573226 8 23.5 942 FBgn0250868 189.67 62.33666667 95.58 0.123899404 0.376985188 0.245867336 -1 -1 -1 0.2 dme-miR-11-3p 7mer-m1 TGTGATG 2R 17573277 17573283 + 2R_17573277_17573283_+ 0.608411993 0.608778247 0.60859512 0.000258943 CG42239 FBtr0290307 17573200 17573330 2R + 17573247 17573298 3'utr CG42239 FlyBase G16881.1 TTTATTGCATATATGTATGTATGCAAATTGTGTGATGAATAGAAGAGGGTTT 29 17573275 0.977089508 6 27 214 0.916666667 1.51851394 0.333333333 0.24137931 0.388888889 29 3 0 33 2R:17573247-17573298 7 CG42239 FBtr0290307 17573200 17573330 TGTGATG 7mer-m1 dme-miR-11-3p 2R + 17573238 17573302 3'utr CG42239 FlyBase G12842.1 TTTTATACTTTTATTGCATATATGTATGTATGCAAATTGTGTGATGAATAGAAGAGGGTTTTTGA 30 17573275 0.982820351 6 30 232 1 1.653212514 0.244444444 0.433333333 0.622222222 30 0 0 45 2R:17573238-17573302 7 28.5 943 FBgn0250868 189.67 62.33666667 95.58 0.15026098 0.457194802 0.298179535 2 2 2 0.2 dme-bantam-3p 6mer3-8 TGATCT 2R 17574846 17574851 + 2R_17574846_17574851_+ 0.999999956 0.996297806 0.998148881 0.002617851 Rab4 FBtr0086830 17574541 17574979 2R + 17574769 17574865 3'utr Rab4 FlyBase G16890.1 ACTTACTATAATTTGTAATTCGTGAAGCACTAGAGCCCTCGAGCAACAAATGATGTATGGCTATAAGCACATGGATCTGATCTAGAGGATGAACAGA 27 17574846 0.966987433 11 25 137 0.939393939 1.491361694 0.575757576 0.185185185 0.333333333 27 2 0 31 2R:17574769-17574865 6 Rab4 FBtr0086830 17574541 17574979 TGATCT 6mer3-8 dme-bantam-3p 2R + 17574817 17574886 3'utr Rab4 FlyBase G12847.1 AATGATGTATGGCTATAAGCACATGGATCTGATCTAGAGGATGAACAGAATACACTCGGCATTTTTAATG 17 17574858 0.958350866 7 17 89 1 1.447158031 0.357142857 0.411764706 0.642857143 17 0 0 28 2R:17574817-17574886 6 14.5 944 FBgn0016701 790.7133333 73.45333333 112.1433333 0.018337872 0.197404248 0.129298814 0 -12 -6 0.2 dme-miR-276a-3p 6mer3-8 AGTTCC 2R 17670655 17670660 + 2R_17670655_17670660_+ 0.567803568 0.679311156 0.623557362 0.07884778 CG30109 FBtr0340271 17670505 17670748 2R + 17670616 17670675 3'utr CG30109 FlyBase G16941.1 CAGCCTAGGTCTACCAAGTACCAGAAGCAGCTTTGGTTTAGTTCCATGACTCGTATCCTT 12 17670662 0.823895082 6 12 88 1 1.113943352 0 0.083333333 0.153846154 12 0 0 13 2R:17670616-17670675 6 CG30109 FBtr0340271 17670505 17670748 AGTTCC 6mer3-8 dme-miR-276a-3p 2R + 17670606 17670670 3'utr CG30109 FlyBase G12890.1 AGTGGAGGAACAGCCTAGGTCTACCAAGTACCAGAAGCAGCTTTGGTTTAGTTCCATGACTCGTA 13 17670649 0.968555069 6 13 71 1 1.447158031 0.178571429 0.615384615 0.821428571 13 0 0 28 2R:17670606-17670670 6 6 945 FBgn0050109 105.4166667 22.59 34.48 0.056916996 0.26560425 0.174013921 -7 6 -0.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 17673099 17673105 - 2R_17673099_17673105_- 0.800754682 0.80101984 0.800887261 0.000187454 Sema-1b FBtr0086891|FBtr0086891|FBtr0086891|FBtr0086890|FBtr0086890|FBtr0086890 17672837|17672837|17672837|17672837|17672837|17672837 17674309|17674309|17674309|17674309|17674309|17674309 2R - 17673061 17673131 3'utr Sema-1b FlyBase G24433.1 AAACGTAATGTAATGATTTCTCATATTGTGATAGATTTTATTGAAATTTTAGAAAGATGAAATGATATGCC 147 17673106 0.991906343 8 140 1552 0.956756757 1.645913275 0.459459459 0.210884354 0.372972973 147 5 3 177 2R:17673061-17673131 7 Sema-1b FBtr0086890|FBtr0086890|FBtr0086890|FBtr0086891|FBtr0086891|FBtr0086891 17672837|17672837|17672837|17672837|17672837|17672837 17674309|17674309|17674309|17674309|17674309|17674309 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 17673090 17673132 3'utr Sema-1b FlyBase G18485.1 AAAACGTAATGTAATGATTTCTCATATTGTGATAGATTTTATT 95 17673106 0.751582062 6 93 987 0.98630137 1.857332496 0.328767123 0.347368421 0.575342466 95 1 1 144 2R:17673090-17673132 7 120 946 FBgn0016059 2585.713333 78.05 119.2733333 0.046408857 1.537475977 1.006092449 1 1 1 0.2 dme-miR-282-5p 6mer2-7 GAGGCT 2R 17673567 17673572 - 2R_17673567_17673572_- 0.996012804 0.995737601 0.995875202 0.000194596 Sema-1b FBtr0086891|FBtr0302161|FBtr0086890 17672837|17673285|17672837 17674309|17674309|17674309 2R - 17673537 17673638 3'utr Sema-1b FlyBase G24435.1 TAAGGAATTGAACATAGAATGTAATTAAAAGTACGAACTAGGCTAAGAAACGAAGAAAACTTCTATGAGGCTGTTTGATAAGAACTGACACCGCAGCCCCCA 250 17673573 0.99021527 11 243 1776 0.975945017 1.976197085 0.18556701 0.144 0.264604811 250 5 2 284 2R:17673537-17673638 6 Sema-1b FBtr0086890|FBtr0302161|FBtr0086891 17672837|17673285|17672837 17674309|17674309|17674309 GAGGCT 6mer2-7 dme-miR-282-5p 2R - 17673535 17673594 3'utr Sema-1b FlyBase G18488.1 AAGAAACGAAGAAAACTTCTATGAGGCTGTTTGATAAGAACTGACACCGCAGCCCCCACA 170 17673573 0.981792446 8 163 1198 0.958333333 1.662757832 0.2375 0.311764706 0.5125 170 6 4 230 2R:17673535-17673594 6 202.5 947 FBgn0016059 2585.713333 78.05 119.2733333 0.078314946 2.594490711 1.697781007 1 1 1 0.2 dme-bantam-3p 6mer2-7 GATCTC 2R 17690185 17690190 + 2R_17690185_17690190_+ 0.999850629 0.99997088 0.999910754 8.51E-05 HPS4 FBtr0086839|FBtr0086840 17690041|17690041 17690822|17690822 2R + 17690145 17690210 3'utr HPS4 FlyBase G16946.1 GAATAGCCAACTTAATGCCATCCACTGTTATTTCATTTGCGATCTCTGGCTGATTCCTTCGTGAGT 258 17690181 0.890951336 11 244 2630 0.948717949 1.772321707 0.298076923 0.186046512 0.326923077 258 12 4 296 2R:17690145-17690210 6 HPS4 FBtr0086839|FBtr0086840 17690041|17690041 17690822|17690822 GATCTC 6mer2-7 dme-bantam-3p 2R + 17690130 17690211 3'utr HPS4 FlyBase G12894.1 GTCTGGGTCCCCGAAGAATAGCCAACTTAATGCCATCCACTGTTATTTCATTTGCGATCTCTGGCTGATTCCTTCGTGAGTC 153 17690181 0.879159978 15 140 1519 0.894495413 1.511883361 0.408256881 0.320261438 0.52293578 153 18 5 195 2R:17690130-17690211 6 157.5 948 FBgn0034261 255.3 8.836666667 13.49666667 0.616921269 17.82346284 11.66954804 4 4 4 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 2R 17734456 17734461 - 2R_17734456_17734461_- 0.98361635 0.99090968 0.987263015 0.005157142 CG6406 FBtr0086883|FBtr0086884 17734417|17734417 17735315|17735315 2R - 17734426 17734474 3'utr CG6406 FlyBase G24467.1 TATTTATTGAACGTTGACTTGAACCATGTTATTGATTTAAAATAAATAC 9 17734461 0.938153825 3 9 82 1 0.954242509 0.222222222 0 0 9 0 0 9 2R:17734426-17734474 6 CG6406 FBtr0086883|FBtr0086884 17734417|17734417 17735315|17735315 TTGACT 6mer3-8 dme-miR-1012-3p 2R - 17734427 17734483 3'utr CG6406 FlyBase G18510.1 ACATACAAATATTTATTGAACGTTGACTTGAACCATGTTATTGATTTAAAATAAATA 9 17734461 0.75691775 5 9 78 1 1.113943352 0.076923077 0.222222222 0.461538462 9 0 0 13 2R:17734427-17734483 6 8.5 949 FBgn0034269 376.6666667 16.84333333 25.91666667 0.022566372 0.504650703 0.327974277 0 0 0 0.2 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 17734916 17734921 - 2R_17734916_17734921_- 0.917213962 0.997012382 0.957113172 0.05642599 CG6406 FBtr0086883|FBtr0086884 17734417|17734417 17735315|17735315 2R - 17734768 17734933 3'utr CG6406 FlyBase G24468.1 TCGCCACCTACCGCTGTGTATTAGCCGAATAGAACCGTGGCTCGAAATTTGAATTTATGGCATAAGCATCGTTTGAGTTTGTTGACTTTGATGGGTTTTCTTAGTTGTTCGTATGTATTATCGTATTCCAAATCCAATTGTTGGTTAGATTAAGTGTTGCTAGGAC 19 17734913 0.984658693 13 19 168 1 1.278753601 0.315789474 0 0 19 0 0 19 2R:17734768-17734933 6 CG6406 FBtr0086883|FBtr0086884 17734417|17734417 17735315|17735315 GCTGTG 6mer2-7 dme-miR-1008-3p 2R - 17734880 17734943 3'utr CG6406 FlyBase G18511.1 ATGTGTACATTCGCCACCTACCGCTGTGTATTAGCCGAATAGAACCGTGGCTCGAAATTTGAAT 10 17734925 0.746540287 8 9 59 0.866666667 0.636822098 0.2 0.4 0.6 10 0 2 13 2R:17734880-17734943 6 6.5 950 FBgn0034269 376.6666667 16.84333333 25.91666667 0.017256637 0.385909361 0.250803859 -8 4 -2 0.2 dme-miR-304-5p 8mer-A1 TGAGATTA 2R 17841112 17841119 + 2R_17841112_17841119_+ 0.618109201 0.605980917 0.612045059 0.008576003 grh FBtr0300539|FBtr0306625|FBtr0300541|FBtr0299705|FBtr0299707|FBtr0345791|FBtr0299706 17840873|17840873|17840873|17840873|17840873|17840873|17840873 17842820|17841528|17841528|17841613|17841613|17841613|17841613 2R + 17841090 17841127 5'utr grh FlyBase G17014.1 GATTTAGTTATTTTAGCAACAATGAGATTATCTAAAAT 17 17841112 0.952336697 3 16 133 1 1.230448921 0 0 0 17 0 0 17 2R:17841090-17841127 8 grh FBtr0299706|FBtr0299707|FBtr0345791|FBtr0300541|FBtr0299705|FBtr0300539|FBtr0306625 17840873|17840873|17840873|17840873|17840873|17840873|17840873 17841613|17841613|17841613|17841528|17841613|17842820|17841528 TGAGATTA 8mer-A1 dme-miR-304-5p 2R + 17841095 17841144 5'utr grh FlyBase G12955.1 AGTTATTTTAGCAACAATGAGATTATCTAAAATTGTTTGATCAAATTTTA 13 17841112 0.979994809 2 12 91 1 1.278753601 0.105263158 0.384615385 0.578947368 13 0 0 19 2R:17841095-17841144 8 13.5 951 FBgn0259211 11.04666667 0.27 0.426666667 1.222088111 50 31.640625 0 0 0 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 17859909 17859915 + 2R_17859909_17859915_+ 0.790403866 0.789709162 0.790056514 0.000491227 olf186-F FBtr0086795|FBtr0086795|FBtr0086795|FBtr0086797|FBtr0086797|FBtr0086797|FBtr0336699|FBtr0336699|FBtr0336699|FBtr0114614|FBtr0114614|FBtr0114614|FBtr0336698|FBtr0336698|FBtr0336698 17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793 17860582|17860582|17860582|17860582|17860582|17860582|17860582|17860582|17860582|17860284|17860284|17860284|17860582|17860582|17860582 2R + 17859883 17859939 3'utr olf186-F FlyBase G17044.1 ATTGTAAATTTGTAGTTGATTAAAATTGTGATACGCGGAATTCAGTAGATTTCTACT 413 17859908 0.719855606 17 384 3002 0.940357853 1.352641846 0.355864811 0.181598063 0.328031809 413 10 20 473 2R:17859883-17859939 7 olf186-F FBtr0336698|FBtr0336698|FBtr0336698|FBtr0114614|FBtr0114614|FBtr0114614|FBtr0336699|FBtr0336699|FBtr0336699|FBtr0086797|FBtr0086797|FBtr0086797|FBtr0086795|FBtr0086795|FBtr0086795 17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793 17860582|17860582|17860582|17860284|17860284|17860284|17860582|17860582|17860582|17860582|17860582|17860582|17860582|17860582|17860582 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 17859885 17859940 3'utr olf186-F FlyBase G12974.2 TGTAAATTTGTAGTTGATTAAAATTGTGATACGCGGAATTCAGTAGATTTCTACTA 288 17859908 0.72611939 12 258 2037 0.90521327 1.303309762 0.362559242 0.374125874 0.575829384 286 22 18 382 2R:17859885-17859940 7 338 952 FBgn0041585 1045.89 35.90333333 55.08666667 0.323169741 9.414167672 6.135786034 1 1 1 0.2 dme-miR-283-5p 6mer3-8 TGATAT 2R 17860314 17860319 + 2R_17860314_17860319_+ 0.999969019 0.998997498 0.999483258 0.000686954 olf186-F FBtr0086795|FBtr0086797|FBtr0336699|FBtr0336698 17859793|17859793|17859793|17859793 17860582|17860582|17860582|17860582 2R + 17860289 17860329 3'utr olf186-F FlyBase G17046.1 GGTGTTGGAGTTTTATTTTTAATCGTGATATATAGCTGAAC 8 17860310 0.981825556 5 8 83 1 0.954242509 0.222222222 0.125 0.222222222 8 0 0 9 2R:17860289-17860329 6 olf186-F FBtr0336698|FBtr0336699|FBtr0086797|FBtr0086795 17859793|17859793|17859793|17859793 17860582|17860582|17860582|17860582 TGATAT 6mer3-8 dme-miR-283-5p 2R + 17860300 17860329 3'utr olf186-F FlyBase G12977.1 TTTATTTTTAATCGTGATATATAGCTGAAC 13 17860307 0.57907223 5 13 125 1 1.230448921 0.411764706 0.230769231 0.411764706 13 0 0 17 2R:17860300-17860329 6 10.5 953 FBgn0041585 1045.89 35.90333333 55.08666667 0.010039297 0.292451954 0.190608738 4 7 5.5 0.2 dme-bantam-3p 6mer3-8 TGATCT 2R 17867199 17867204 - 2R_17867199_17867204_- 0.999164292 0.927178699 0.963171496 0.050901506 Mapmodulin FBtr0086822|FBtr0300410|FBtr0086823|FBtr0113091 17866176|17866317|17866317|17867036 17867209|17867209|17867209|17867209 2R - 17867172 17867226 stop_codon Mapmodulin FlyBase G24543.1 GAAAGCATGATGGTTAAAACCCTGATCTGTCGGTATAGCGTCTTTGTACGTTATA 23 17867204 0.714524877 7 22 170 0.966666667 1.161368002 0.133333333 0.260869565 0.433333333 23 0 1 29 2R:17867172-17867226 6 Mapmodulin FBtr0300410|FBtr0086822|FBtr0086823 17866317|17866176|17866317 17867209|17867209|17867209 TGATCT 6mer3-8 dme-bantam-3p 2R - 17867151 17867219 stop_codon Mapmodulin FlyBase G18567.1 TGATGGTTAAAACCCTGATCTGTCGGTATAGCGTCTTTGTACGTTATAAATTTAAATATACACCCACAC 7 17867204 0.980005899 5 7 53 1 1 0 0.428571429 0.6 7 0 0 10 2R:17867151-17867219 6 14.5 954 FBgn0034282 4492.536667 281.28 432.79 0.003227575 0.051550057 0.033503547 0 0 0 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2R 18100562 18100567 + 2R_18100562_18100567_+ 0.924523915 0.978007388 0.951265651 0.037818546 CG5098 FBtr0329994|FBtr0346952|FBtr0113092|FBtr0086732 18100252|18100207|18100207|18100207 18101031|18101031|18101031|18101031 2R + 18100531 18100626 3'utr CG5098 FlyBase G17062.1 ATTTTTTCGCATAGTCCAGAACTTTACATTAGTACCTTTTAGTTCTAACTAATTTTAAAACCACCAGCCCATGTCCTATGCCCACCCATCTGCATC 76 18100569 0.864456841 14 75 707 0.989010989 1.954242509 0.142857143 0.157894737 0.296703297 76 1 0 90 2R:18100531-18100626 6 CG5098 FBtr0113092|FBtr0086732|FBtr0329994|FBtr0346952 18100207|18100207|18100252|18100207 18101031|18101031|18101031|18101031 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2R + 18100504 18100620 3'utr CG5098 FlyBase G12992.1 GTTTATGTTTAAGATACGTCCTAAATTATTTTTTCGCATAGTCCAGAACTTTACATTAGTACCTTTTAGTTCTAACTAATTTTAAAACCACCAGCCCATGTCCTATGCCCACCCATC 62 18100569 0.989677844 12 60 590 0.957446809 1.954242509 0.117021277 0.322580645 0.553191489 62 4 0 90 2R:18100504-18100620 6 52.5 955 FBgn0034300 227 5.456666667 8.356666667 0.231277533 9.6212584 6.282409254 -7 -7 -7 0.2 dme-miR-8-3p 8mer-A1 CAGTATTA 2R 18118379 18118386 - 2R_18118379_18118386_- 0.649469792 0.642924364 0.646197078 0.004628297 stau FBtr0086783|FBtr0086784 18117894|18117894 18119780|18119780 2R - 18118351 18118425 3'utr stau FlyBase G24567.2 AGCCCCAGCGAACTGTAACCGTTGAAATGAAGTCAATCCCAGTATTAAATGTATAGATAGGGGGCAGTTGTGCGT 19 18118389 0.974347486 7 15 114 0.875 1.322219295 0.125 0.263157895 0.416666667 19 3 0 21 2R:18118351-18118425 8 stau FBtr0086784|FBtr0086783 18117894|18117894 18119780|18119780 CAGTATTA 8mer-A1 dme-miR-8-3p 2R - 18118359 18118426 3'utr stau FlyBase G18586.1 AAGCCCCAGCGAACTGTAACCGTTGAAATGAAGTCAATCCCAGTATTAAATGTATAGATAGGGGGCAG 9 18118389 0.968322356 6 8 43 1 1.322219295 0.142857143 0.666666667 0.857142857 9 0 0 21 2R:18118359-18118426 8 9 956 FBgn0003520 789.19 18.35 28.11 0.011404098 0.490463215 0.320170758 3 3 3 0.2 dme-miR-932-5p 7mer-A1 GAATTGA 2R 18119471 18119477 - 2R_18119471_18119477_- 0.78042914 0.823322152 0.801875646 0.030330002 stau FBtr0086783|FBtr0086784 18117894|18117894 18119780|18119780 2R - 18119419 18119480 3'utr stau FlyBase G24574.1 TGAGAATTGAATAACGAATCGAACTGATAGTAACCGAAACTGAACAGAGGCGAACACTTAAC 14 18119453 0.939947215 5 14 54 1 1.255272505 0.166666667 0.285714286 0.444444444 14 0 0 18 2R:18119419-18119480 7 stau FBtr0086784|FBtr0086783 18117894|18117894 18119780|18119780 GAATTGA 7mer-A1 dme-miR-932-5p 2R - 18119421 18119479 3'utr stau FlyBase G18591.1 GAGAATTGAATAACGAATCGAACTGATAGTAACCGAAACTGAACAGAGGCGAACACTTA 17 18119452 0.955733922 7 15 67 0.913043478 1.322219295 0.47826087 0.294117647 0.47826087 17 2 0 21 2R:18119421-18119479 7 8.5 957 FBgn0003520 789.19 18.35 28.11 0.010770537 0.463215259 0.302383493 -24 -25 -24.5 0.2 dme-miR-92b-3p 7mer-m1 TGCAATT 2R 18119736 18119742 - 2R_18119736_18119742_- 0.761123279 0.765513886 0.763318582 0.003104623 stau FBtr0086783|FBtr0086784 18117894|18117894 18119780|18119780 2R - 18119710 18119794 stop_codon stau FlyBase G24578.1 ATGCCATGAAATAAGCATAAAGCGCTGAAAATTTCACAAAACCCTTATTAACTGCAATTTTTGTTGTTGCACATAAGCATGATAA 28 18119744 0.989184775 12 23 213 0.833333333 1.176091259 0.027777778 0.214285714 0.388888889 28 5 1 30 2R:18119710-18119794 7 stau FBtr0086784|FBtr0301614|FBtr0086783 18117894|18119622|18117894 18119780|18119780|18119780 TGCAATT 7mer-m1 dme-miR-92b-3p 2R - 18119711 18119775 3'utr stau FlyBase G18594.1 AAGCGCTGAAAATTTCACAAAACCCTTATTAACTGCAATTTTTGTTGTTGCACATAAGCATGATA 23 18119741 0.993817712 7 15 187 0.675 1.431363764 0.075 0.434782609 0.675 23 13 0 27 2R:18119711-18119775 7 19 958 FBgn0003520 789.19 18.35 28.11 0.024075318 1.035422343 0.675916044 2 -1 0.5 0.2 dme-miR-980-5p 6mer3-8 GAAAAA 2R 18139387 18139392 + 2R_18139387_18139392_+ 0.994724085 0.954111669 0.974417877 0.028717303 Pcl FBtr0086735|FBtr0329998 18139235|18139235 18139442|18139990 2R + 18139345 18139432 3'utr Pcl FlyBase G17085.1 TGTTAATGTTTAAAAGTTTATTACCAACCCACTGCCAAAATAGAAAAAGATTGTTCAAAATATTGGTTCAGCATTAAAGCGATAAAAT 19 18139395 0.961262431 6 19 98 1 1.342422681 0.136363636 0.157894737 0.272727273 19 0 0 22 2R:18139345-18139432 6 Pcl FBtr0086735|FBtr0329998 18139235|18139235 18139442|18139990 GAAAAA 6mer3-8 dme-miR-980-5p 2R + 18139357 18139428 3'utr Pcl FlyBase G13008.1 AAAGTTTATTACCAACCCACTGCCAAAATAGAAAAAGATTGTTCAAAATATTGGTTCAGCATTAAAGCGATA 13 18139395 0.800346722 7 13 70 1 1.176091259 0.066666667 0.153846154 0.266666667 13 0 0 15 2R:18139357-18139428 6 11.5 959 FBgn0003044 1047.913333 31.18 47.85 0.01097419 0.368826171 0.240334378 -8 -8 -8 0.2 dme-miR-988-3p 7mer-A1 CAAGGGA 2R 18146837 18146843 + 2R_18146837_18146843_+ 0.755540878 0.780861567 0.768201222 0.017904439 pAbp FBtr0086740 18145219 18147191 2R + 18146675 18146952 3'utr pAbp FlyBase G17106.1 AAACAAATAAAAACCCAAGGAAAAATCATTGAAAAAATTGCAAAACACAAAACCACATGTATGCAGAAAATGCAAAATTATTTAAAAAAAACAAACAAACAAAATAATGAGAGTAAAACAGAAAAAAAAAACATAACCAAAACCCGAATTGGAATGTTAGTTCAAGGGAAATTGCGAAGAAGAAAACTTTTACTTTTCACGAAATATACGCAAGTCAACACACTTCTATATATAGCAGATATATATATGTATCCTTATATATTAAAGCGAAATAAAAC 86 18146835 0.972309948 27 79 454 0.93814433 1.356981401 0.092783505 0.127906977 0.226804124 86 3 3 91 2R:18146675-18146952 7 pAbp FBtr0086740 18145219 18147191 CAAGGGA 7mer-A1 dme-miR-988-3p 2R + 18146661 18146858 3'utr pAbp FlyBase G13033.1 AAATCGAAAACTAAAAACAAATAAAAACCCAAGGAAAAATCATTGAAAAAATTGCAAAACACAAAACCACATGTATGCAGAAAATGCAAAATTATTTAAAAAAAACAAACAAACAAAATAATGAGAGTAAAACAGAAAAAAAAAACATAACCAAAACCCGAATTGGAATGTTAGTTCAAGGGAAATTGCGAAGAAGAA 40 18146834 0.952382821 16 37 162 0.940298507 1.498310554 0.23880597 0.5 0.701492537 40 3 1 63 2R:18146661-18146858 7 21 960 FBgn0265297 43597.22333 1372.25 2113.58 0.000481682 0.015303334 0.009935749 2 3 2.5 0.2 dme-miR-277-3p 7mer-m8 TGCATTT 2R 18147416 18147422 - 2R_18147416_18147422_- 0.554722314 0.387916747 0.47131953 0.117949371 CG17680 FBtr0086781 18147295 18147588 2R - 18147279 18147440 3'utr CG17680 FlyBase G24602.1 AAGAATCCGCGCAGCTCTTGCATTTTTTGTGTATTGTCGTGTATTCTTCAAGTCCCGCTTTGATATTTTCGCTTTCTGAATGTTAACTATGCTCGTTAAATACTTGAATGTACTAGAATTAAATAAAGTTTATTCGACTATGCTTAAAACCTGTCTGTTATT 49 18147423 0.987563768 18 46 411 0.950819672 1.286306739 0.31147541 0.183673469 0.344262295 49 1 2 58 2R:18147279-18147440 7 CG17680 FBtr0086781 18147295 18147588 TGCATTT 7mer-m8 dme-miR-277-3p 2R - 18147316 18147438 3'utr CG17680 FlyBase G18613.1 GAATCCGCGCAGCTCTTGCATTTTTTGTGTATTGTCGTGTATTCTTCAAGTCCCGCTTTGATATTTTCGCTTTCTGAATGTTAACTATGCTCGTTAAATACTTGAATGTACTAGAATTAAATA 25 18147423 0.988304384 10 24 221 0.967741935 1.176091259 0.548387097 0.2 0.35483871 25 0 1 30 2R:18147316-18147438 7 13 961 FBgn0062440 137 25.31333333 38.62666667 0.094890511 0.513563339 0.336555057 1 1 1 0.2 dme-miR-1003-3p 7mer-m8 ATGTGAG 2R 18154173 18154179 - 2R_18154173_18154179_- 0.671796173 0.671796207 0.67179619 0 lolal FBtr0086777 18154093 18155147 2R - 18154141 18154197 3'utr lolal FlyBase G24616.1 ATGTATGTATATGTATACATGTGAGCATAGATTTAAAGAAACTACGGTAAATAAACA 27 18154170 0.988774769 7 22 204 0.766666667 1.06069784 0.133333333 0.074074074 0.166666667 27 6 1 23 2R:18154141-18154197 7 lolal FBtr0086777 18154093 18155147 ATGTGAG 7mer-m8 dme-miR-1003-3p 2R - 18154134 18154197 3'utr lolal FlyBase G18621.1 ATGTATGTATATGTATACATGTGAGCATAGATTTAAAGAAACTACGGTAAATAAACAGAATAAT 21 18154182 0.987268663 8 17 145 0.810810811 1.477121255 0.162162162 0.476190476 0.702702703 21 7 0 30 2R:18154134-18154197 7 23.5 962 FBgn0022238 614.5133333 54.55666667 83.64333333 0.038241644 0.430744791 0.280954848 -9 3 -3 0.2 dme-miR-305-5p 6mer2-7 GTACAA 2R 18164138 18164143 + 2R_18164138_18164143_+ 0.951479098 0.949557313 0.950518205 0.001358918 CG10915 FBtr0345416|FBtr0086746 18163524|18163524 18164746|18164209 2R + 18164083 18164191 3'utr CG10915 FlyBase G17122.1 AAGCCAAGAGACAAGCGACTTTAAATGTAATTCCGTACGTAGTAACCGAACATTTGTACAAGGCCGTGCGATTCTCATAACAAGTAACAGCCACAATATATGATAATTA 93 18164136 0.955038233 13 88 400 0.957264957 1.572096768 0.299145299 0.225806452 0.384615385 93 3 2 112 2R:18164083-18164191 6 CG10915 FBtr0086746|FBtr0345416 18163524|18163524 18164209|18164746 GTACAA 6mer2-7 dme-miR-305-5p 2R + 18164083 18164175 3'utr CG10915 FlyBase G13044.1 AAGCCAAGAGACAAGCGACTTTAAATGTAATTCCGTACGTAGTAACCGAACATTTGTACAAGGCCGTGCGATTCTCATAACAAGTAACAGCCA 81 18164136 0.955813876 12 79 367 0.982142857 2.041392685 0.303571429 0.283950617 0.482142857 81 2 0 110 2R:18164083-18164175 6 58 963 FBgn0034308 795.0233333 28.65333333 43.94333333 0.072953834 2.024197301 1.319881666 2 2 2 0.2 dme-miR-980-3p 7mer-A1 GCAGCTA 2R 18164340 18164346 + 2R_18164340_18164346_+ 0.81531339 0.813819285 0.814566338 0.001056488 CG10915 FBtr0345416 18163524 18164746 2R + 18164292 18164421 3'utr CG10915 FlyBase G17123.2 ATAGTTCTTAGGTGCGTCGCATACGTGTGTAATCAACTTCCTCCATGTGCAGCTAACATACTGAATTATTTCGTAGTGTTTGATTTATATATTAAGTTCTAAGTTCGGCCTAAGCACCTTTGTTTGCCCG 136 18164337 0.981511724 18 129 890 0.958333333 1.90579588 0.035714286 0.183823529 0.339285714 136 6 1 161 2R:18164292-18164421 7 CG10915 FBtr0345416 18163524 18164746 GCAGCTA 7mer-A1 dme-miR-980-3p 2R + 18164289 18164389 3'utr CG10915 FlyBase G13045.2 TTAATAGTTCTTAGGTGCGTCGCATACGTGTGTAATCAACTTCCTCCATGTGCAGCTAACATACTGAATTATTTCGTAGTGTTTGATTTATATATTAAGTT 81 18164337 0.796114938 13 79 504 1 2.096910013 0.04 0.419753086 0.624 81 0 0 125 2R:18164289-18164389 7 91.5 964 FBgn0034308 795.0233333 28.65333333 43.94333333 0.115090962 3.193345742 2.082227111 3 3 3 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 18164534 18164539 + 2R_18164534_18164539_+ 0.978950601 0.893742055 0.936346328 0.060251508 CG10915 FBtr0345416|FBtr0345416|FBtr0345416 18163524|18163524|18163524 18164746|18164746|18164746 2R + 18164518 18164626 3'utr CG10915 FlyBase G17124.1 ATTTTACAAATGCGTACTGTGAACATCCCTCCAGCCCCCCAGCAGCTTGGATTACCTTTTTAGTCAAAGGGCAGCAGCCAGTCAAGTAGTGTTGTTGGTACAATAAATA 48 18164543 0.764014351 14 43 293 0.877192982 1.096910013 0.333333333 0.125 0.263157895 48 4 3 50 2R:18164518-18164626 6 CG10915 FBtr0345416|FBtr0345416|FBtr0345416 18163524|18163524|18163524 18164746|18164746|18164746 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 18164518 18164619 3'utr CG10915 FlyBase G13047.1 ATTTTACAAATGCGTACTGTGAACATCCCTCCAGCCCCCCAGCAGCTTGGATTACCTTTTTAGTCAAAGGGCAGCAGCCAGTCAAGTAGTGTTGTTGGTACA 29 18164536 0.686504114 12 26 154 0.87755102 1.633468456 0.204081633 0.413793103 0.653061224 29 6 0 43 2R:18164518-18164619 6 14.5 965 FBgn0034308 795.0233333 28.65333333 43.94333333 0.018238458 0.506049325 0.329970416 -9 -2 -5.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2R 18168991 18168996 - 2R_18168991_18168996_- 0.998379662 0.996913771 0.997646716 0.001036548 Dgp-1 FBtr0086773|FBtr0086774 18168741|18168411 18169024|18169024 2R - 18168966 18169077 stop_codon Dgp-1 FlyBase G24640.1 ATCCTTCGTCGTCGTCCTCGGTTGAAGTCACACCGGCCGCTCTCACCGAGTGAAGTGCGCCGCCTGCATGTTTTGGCTCTTTCTAGTTTTGTAAACTAAAGTATTTTTTTTT 29 18168997 0.900177205 17 27 278 0.911764706 1.491361694 0.147058824 0.103448276 0.235294118 29 3 0 31 2R:18168966-18169077 6 Dgp-1 FBtr0086774|FBtr0086773 18168411|18168741 18169024|18169024 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2R - 18168973 18169107 stop_codon Dgp-1 FlyBase G18637.1 CGGCCTCTTTGGGTCTGCCCCTCGGCGAGAATCCTTCGTCGTCGTCCTCGGTTGAAGTCACACCGGCCGCTCTCACCGAGTGAAGTGCGCCGCCTGCATGTTTTGGCTCTTTCTAGTTTTGTAAACTAAAGTATT 32 18168997 0.949764327 12 32 262 1 1.707570176 0.117647059 0.5 0.68627451 32 0 0 51 2R:18168973-18169107 6 15.5 966 FBgn0027836 713.1466667 32.87333333 49.73 0.02173466 0.471506794 0.311683089 1 1 1 0.2 dme-miR-1003-3p 6mer2-7 TGTGAG 2R 18175472 18175477 - 2R_18175472_18175477_- 0.987271895 0.988198329 0.987735112 0.000655064 CG5726 FBtr0086772 18175253 18176079 2R - 18175426 18175498 3'utr CG5726 FlyBase G24656.1 ACGTATTTTTAAAGCAAATTTTGTGAGGCCCTCTGTTGGAACAACAAAGCCAAGCCGGAGTGCAGAGAAAAAC 66 18175478 0.973020183 7 62 449 0.931506849 1.355387658 0.054794521 0.106060606 0.191780822 66 3 2 68 2R:18175426-18175498 6 CG5726 FBtr0086772 18175253 18176079 TGTGAG 6mer2-7 dme-miR-1003-3p 2R - 18175454 18175498 3'utr CG5726 FlyBase G18656.1 ACGTATTTTTAAAGCAAATTTTGTGAGGCCCTCTGTTGGAACAAC 34 18175478 0.680497868 5 32 255 0.9375 1.352182518 0 0.323529412 0.520833333 34 2 1 45 2R:18175454-18175498 6 48 967 FBgn0034313 580.9266667 20.17 30.98666667 0.082626608 2.379771939 1.549053356 1 1 1 0.2 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 18175678 18175685 - 2R_18175678_18175685_- 0.590341035 0.605638986 0.597990011 0.01081732 CG5726 FBtr0086772 18175253 18176079 2R - 18175666 18175697 3'utr CG5726 FlyBase G24658.1 GCTTAGAAACTAAGTACAAAGTCAATGAAAAA 5 18175672 0.866793604 4 5 18 1 0.903089987 0.375 0.6 0.75 5 0 0 8 2R:18175666-18175697 8 CG5726 FBtr0086772 18175253 18176079 AGTACAAA 8mer-A1 dme-miR-305-5p 2R - 18175658 18175701 3'utr CG5726 FlyBase G18657.1 AATTGCTTAGAAACTAAGTACAAAGTCAATGAAAAAACAAAAAT 6 18175696 0.977280583 4 5 25 0.857142857 0.77815125 0 0.166666667 0.285714286 6 1 0 6 2R:18175658-18175701 8 5 968 FBgn0034313 580.9266667 20.17 30.98666667 0.008606938 0.24789291 0.161359725 -13 11 -1 0.2 dme-miR-14-3p 6mer2-7 AGACTG 2R 18175961 18175966 - 2R_18175961_18175966_- 0.883724146 0.931412372 0.907568259 0.03372072 CG5726 FBtr0086772 18175253 18176079 2R - 18175923 18176012 3'utr CG5726 FlyBase G24660.1 TGTTTCGCCTTCGTATATGTTTCCTAATGGATGTGTATATCCACGTAGACTGTTTTCACATTATTTTGTCTTCAACTGAGCTCAAATGTT 39 18175960 0.799523655 10 36 349 0.957446809 1.352182518 0.255319149 0.179487179 0.319148936 39 1 1 45 2R:18175923-18176012 6 CG5726 FBtr0086772 18175253 18176079 AGACTG 6mer2-7 dme-miR-14-3p 2R - 18175923 18175978 3'utr CG5726 FlyBase G18658.1 GTATATCCACGTAGACTGTTTTCACATTATTTTGTCTTCAACTGAGCTCAAATGTT 16 18175960 0.9852749 5 14 123 0.913043478 1.021189299 0.347826087 0.25 0.47826087 16 1 1 21 2R:18175923-18175978 6 16.5 969 FBgn0034313 580.9266667 20.17 30.98666667 0.028402897 0.818046604 0.532487091 -6 -6 -6 0.2 dme-miR-1007-3p 7mer-m8 TGAGCTT 2R 18275681 18275687 - 2R_18275681_18275687_- 0.597636924 0.523051569 0.560344247 0.052739771 Ote FBtr0086768 18275605 18275804 2R - 18275637 18275700 3'utr Ote FlyBase G24678.1 TTTTGATGTAACTTGAGCTTGAGTTTGACTAGCATTTAAGCTGCGTGTTATCCGTGTTCAAATA 28 18275687 0.807666015 6 27 226 1 1.568201724 0.594594595 0.25 0.432432432 28 0 0 37 2R:18275637-18275700 7 Ote FBtr0086768 18275605 18275804 TGAGCTT 7mer-m8 dme-miR-1007-3p 2R - 18275638 18275714 3'utr Ote FlyBase G18673.1 TTGTATGAATCTTGTTTTGATGTAACTTGAGCTTGAGTTTGACTAGCATTTAAGCTGCGTGTTATCCGTGTTCAAAT 18 18275687 0.986411498 5 18 156 1 1.431363764 0.481481481 0.388888889 0.592592593 18 0 0 27 2R:18275638-18275714 7 18 970 FBgn0266420 914.6666667 70.74 107.93 0.0196793 0.254452926 0.166774761 0 0 0 0.2 dme-miR-92b-3p 7mer-m1 TGCAATT 2R 18278583 18278589 - 2R_18278583_18278589_- 0.669804881 0.710886164 0.690345522 0.029048866 sbb FBtr0301550 18278196 18280102 2R - 18278576 18278609 3'utr sbb FlyBase G24684.1 AGGTTTTTTGACATTCTTAATGCAATTTGTAATC 14 18278593 0.757025235 3 14 139 1 1.204119983 0 0.142857143 0.25 14 0 0 16 2R:18278576-18278609 7 sbb FBtr0301550 18278196 18280102 TGCAATT 7mer-m1 dme-miR-92b-3p 2R - 18278576 18278619 3'utr sbb FlyBase G18674.1 AGGAGTCGCTAGGTTTTTTGACATTCTTAATGCAATTTGTAATC 13 18278593 0.987181019 5 12 115 1 1.342422681 0.090909091 0.538461538 0.727272727 13 0 0 22 2R:18278576-18278619 7 13 971 FBgn0010575 986.7266667 17.07666667 26.24333333 0.013174875 0.761272692 0.495363902 4 4 4 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 2R 18279374 18279379 - 2R_18279374_18279379_- 0.999162288 0.999959039 0.999560663 0.000563352 sbb FBtr0301550|FBtr0329997|FBtr0301551|FBtr0301547 18278196|18279063|18279063|18278978 18280102|18280048|18280102|18280102 2R - 18279350 18279458 3'utr sbb FlyBase G24688.2 ATTGTTTAACTAAATGATTAAATTATGCAAGTAGAACGTACAAGATTAGCATTTAGCGTGTGTATTAATTATCCTTATCTGTGTTGCGGATGGAGCTGCGCGGGATTTG 233 18279381 0.984492968 21 165 1912 0.701886792 1.667452953 0.230188679 0.124463519 0.230188679 233 76 3 186 2R:18279350-18279458 6 sbb FBtr0301551|FBtr0301547|FBtr0301550|FBtr0329997 18279063|18278978|18278196|18279063 18280102|18280102|18280102|18280048 TGTGTT 6mer3-8 dme-miR-317-3p 2R - 18279301 18279393 3'utr sbb FlyBase G18678.1 TAATTATCCTTATCTGTGTTGCGGATGGAGCTGCGCGGGATTTGCATCTAAAAGACAAATTGGGCGCGCCGCCCATTCAATTCTTATAAATAT 220 18279381 0.885389879 16 135 1533 0.630813953 1.222516382 0.296511628 0.404545455 0.619186047 220 115 12 217 2R:18279301-18279393 6 211.5 972 FBgn0010575 986.7266667 17.07666667 26.24333333 0.214345074 12.3853211 8.059189635 2 2 2 0.2 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 18409811 18409817 - 2R_18409811_18409817_- 0.823340137 0.821366646 0.822353391 0.001395475 imd FBtr0086725|FBtr0345891 18409794|18409794 18410171|18410171 2R - 18409801 18409830 3'utr imd FlyBase G24719.1 TTATACAAATAGAAGCTTTATTGTTACGTA 5 18409821 0.854286714 2 5 41 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2R:18409801-18409830 7 imd FBtr0086725|FBtr0345891 18409794|18409794 18410171|18410171 AGCTTTA 7mer-A1 dme-miR-79-3p 2R - 18409804 18409861 3'utr imd FlyBase G18701.1 GAGCTGGTATTTAAAAGCATTTTTGTAAAGTTTATACAAATAGAAGCTTTATTGTTAC 9 18409813 0.98230543 6 8 67 1 1.176091259 0.6 0.333333333 0.6 9 0 0 15 2R:18409804-18409861 7 6 973 FBgn0013983 396 36.13 55.28 0.015151515 0.16606698 0.10853835 4 -4 0 0.2 dme-miR-92b-3p 8mer-A1 GTGCAATA 2R 18409976 18409983 - 2R_18409976_18409983_- 0.526768865 0.584100005 0.555434435 0.04053921 imd FBtr0086725|FBtr0345891 18409794|18409794 18410171|18410171 2R - 18409884 18409994 3'utr imd FlyBase G24720.1 ACGGGATATATGTGCAATATTTGATTTATAAATCCAACCTATCGAATAAGTGCGTAGAATTGCATTAACTGTTATTACTGCAGTTTAATCTTTAAGTTGTGATACTTGTGT 27 18409984 0.772176735 13 24 239 0.914285714 1.505149978 0.457142857 0.148148148 0.342857143 27 3 0 32 2R:18409884-18409994 8 imd FBtr0086725|FBtr0345891 18409794|18409794 18410171|18410171 GTGCAATA 8mer-A1 dme-miR-92b-3p 2R - 18409885 18409993 3'utr imd FlyBase G18702.1 CGGGATATATGTGCAATATTTGATTTATAAATCCAACCTATCGAATAAGTGCGTAGAATTGCATTAACTGTTATTACTGCAGTTTAATCTTTAAGTTGTGATACTTGTG 33 18409984 0.793735591 12 26 274 0.790697674 0.929418926 0.23255814 0.272727273 0.441860465 33 6 3 34 2R:18409885-18409993 8 9 974 FBgn0013983 396 36.13 55.28 0.022727273 0.249100471 0.162807525 1 1 1 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 18419784 18419791 + 2R_18419784_18419791_+ 0.602738028 0.603470034 0.603104031 0.000517602 Dp1 FBtr0345226|FBtr0086682|FBtr0086679|FBtr0086680|FBtr0086681|FBtr0086683|FBtr0340329 18419424|18419424|18419424|18419424|18419424|18419424|18419424 18420742|18420742|18420742|18420742|18420742|18421124|18420742 2R + 18419761 18419817 3'utr Dp1 FlyBase G17185.1 ACACATGCTCACACATATGAAATTGCATTTATACAACATATAGAATACGAGAATCGA 84 18419783 0.807586703 7 77 648 0.914893617 1.33243846 0.031914894 0.107142857 0.20212766 84 5 3 86 2R:18419761-18419817 8 Dp1 FBtr0086683|FBtr0340329|FBtr0086680|FBtr0086681|FBtr0086682|FBtr0086679|FBtr0345226 18419424|18419424|18419424|18419424|18419424|18419424|18419424 18421124|18420742|18420742|18420742|18420742|18420742|18420742 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 18419762 18419805 3'utr Dp1 FlyBase G13102.1 CACATGCTCACACATATGAAATTGCATTTATACAACATATAGAA 41 18419783 0.964412269 4 39 282 0.938461538 1.785329835 0.123076923 0.390243902 0.615384615 41 4 0 61 2R:18419762-18419805 8 60.5 975 FBgn0027835 9328.583333 204.7766667 314.1966667 0.006485443 0.295443817 0.192554557 1 1 1 0.2 dme-miR-1012-3p 6mer2-7 TGACTA 2R 18420019 18420024 + 2R_18420019_18420024_+ 0.999968797 0.999999987 0.999984392 2.21E-05 Dp1 FBtr0345226|FBtr0086682|FBtr0086679|FBtr0086680|FBtr0086681|FBtr0086683|FBtr0340329 18419424|18419424|18419424|18419424|18419424|18419424|18419424 18420742|18420742|18420742|18420742|18420742|18421124|18420742 2R + 18419965 18420037 3'utr Dp1 FlyBase G17186.1 TCCCTAAAAGTAAGCAGAAAGTTCAGCAAAATGGTTTGTTAATTGAATTAAAACTGACTAGCGAAGCACGTTC 14 18420011 0.970726222 6 11 63 0.8125 1.113943352 0.5 0.142857143 0.25 14 3 0 13 2R:18419965-18420037 6 Dp1 FBtr0086683|FBtr0340329|FBtr0086680|FBtr0086681|FBtr0086682|FBtr0086679|FBtr0345226 18419424|18419424|18419424|18419424|18419424|18419424|18419424 18421124|18420742|18420742|18420742|18420742|18420742|18420742 TGACTA 6mer2-7 dme-miR-1012-3p 2R + 18419977 18420060 3'utr Dp1 FlyBase G13104.1 AGCAGAAAGTTCAGCAAAATGGTTTGTTAATTGAATTAAAACTGACTAGCGAAGCACGTTCAAGAACGAATGTAATTTTAAGCA 21 18420012 0.841890371 8 15 119 0.807692308 1.021189299 0.269230769 0.19047619 0.346153846 21 4 1 21 2R:18419977-18420060 6 10.5 976 FBgn0027835 9328.583333 204.7766667 314.1966667 0.001125573 0.051275373 0.03341856 8 7 7.5 0.2 dme-miR-1003-3p 6mer3-8 ATGTGA 2R 18620532 18620537 - 2R_18620532_18620537_- 0.999890437 0.598319186 0.799104812 0.283953719 Atg7 FBtr0086712|FBtr0086711 18620464|18620464 18620720|18620720 2R - 18620503 18620636 3'utr Atg7 FlyBase G24755.1 AGCATTTATAGTTCAATGTCTATACCAAAAATGTGTGTACTTCAATGCTTTTATTCTATCTAGTCGTTAAGCAAATTGTGAATCATTCAAATGAAATTGATGTGAAAATTAGGCATAAGAAAAATGTGAATTTA 39 18620528 0.981159422 11 37 268 0.957446809 1.352182518 0.170212766 0.179487179 0.319148936 39 1 1 45 2R:18620503-18620636 6 Atg7 FBtr0086712|FBtr0086711 18620464|18620464 18620720|18620720 ATGTGA 6mer3-8 dme-miR-1003-3p 2R - 18620503 18620622 3'utr Atg7 FlyBase G18724.1 AATGTCTATACCAAAAATGTGTGTACTTCAATGCTTTTATTCTATCTAGTCGTTAAGCAAATTGTGAATCATTCAAATGAAATTGATGTGAAAATTAGGCATAAGAAAAATGTGAATTTA 26 18620561 0.985100189 12 24 192 0.976744186 1.62324929 0.255813953 0.423076923 0.651162791 26 1 0 42 2R:18620503-18620622 6 10 977 FBgn0034366 131 6.586666667 10.04 0.076335878 1.518218623 0.996015936 -9 24 7.5 0.2 dme-miR-305-5p 7mer-A1 GTACAAA 2R 18632585 18632591 - 2R_18632585_18632591_- 0.596877114 0.57152031 0.584198712 0.017929965 CG30122 FBtr0086660|FBtr0300924|FBtr0300923 18632326|18632326|18632326 18632821|18632821|18632821 2R - 18632567 18632658 3'utr CG30122 FlyBase G24773.1 AAACCAAACAATTGCGAGGGCTAACCAAACCCTAAGTCAAAATTCTTACCTTACCTTCGGATGGATTGTACAAAACTAAGACTACATATATC 51 18632593 0.937656251 11 47 300 0.911764706 1.491361694 0.088235294 0.254901961 0.441176471 51 5 1 62 2R:18632567-18632658 7 CG30122 FBtr0300923|FBtr0300924|FBtr0086660 18632326|18632326|18632326 18632821|18632821|18632821 GTACAAA 7mer-A1 dme-miR-305-5p 2R - 18632538 18632620 3'utr CG30122 FlyBase G18736.1 AAAATTCTTACCTTACCTTCGGATGGATTGTACAAAACTAAGACTACATATATCATTTGAAATTGAACGTGAATGTTTCGCTT 34 18632593 0.972391331 10 31 222 0.94 1.371067862 0.04 0.352941176 0.56 34 2 1 47 2R:18632538-18632620 7 33 978 FBgn0050122 2646.33 69.24 106.41 0.0124701 0.47660312 0.310121229 2 2 2 0.2 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 2R 18641381 18641386 - 2R_18641381_18641386_- 0.75322252 0.364554502 0.558888511 0.274829778 SP2637 FBtr0301861|FBtr0301862 18640860|18640860 18641446|18641446 2R - 18641324 18641414 5'utr SP2637 FlyBase G24798.1 CGAAAATGTCGCAGATGTGTTAATTGACTGGTGCATGTGTTAATTGTCGCTGTCCACCGCAAATGCTTCTGCTTGCCTTTTGTTTAAGTTT 18 18641390 0.687561821 10 16 170 0.857142857 0.77815125 0.238095238 0.166666667 0.285714286 18 1 2 18 2R:18641324-18641414 6 SP2637 FBtr0301861|FBtr0301862 18640860|18640860 18641446|18641446 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 2R - 18641330 18641405 5'utr SP2637 FlyBase G18754.1 CGCAGATGTGTTAATTGACTGGTGCATGTGTTAATTGTCGCTGTCCACCGCAAATGCTTCTGCTTGCCTTTTGTTT 16 18641371 0.621200146 10 13 120 0.88 1.342422681 0.12 0.3125 0.56 16 3 0 22 2R:18641330-18641405 6 9.5 979 FBgn0034371 900.1366667 60.64 93.18 0.010553953 0.156662269 0.101953209 4 -15 -5.5 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 18658818 18658824 - 2R_18658818_18658824_- 0.450385241 0.447624432 0.449004836 0.00195218 CG42306 FBtr0299689|FBtr0299688|FBtr0340393 18658416|18658416|18658416 18660044|18660044|18660044 2R - 18658731 18658845 5'utr CG42306 FlyBase G24809.1 TGTGTACGAAAAAATATCCGATGTGTTCGAGTTTGTCCAATCTTGCCTGGCGGACGAAAGCCTGGATTTTAGCTTGGTGTCCAACAGCGATGGCAAACTGGGCGATGAGGACTTG 22 18658824 0.980418377 8 21 151 0.96 1.380211242 0.04 0.136363636 0.24 22 1 0 24 2R:18658731-18658845 7 CG42306 FBtr0340393|FBtr0299688|FBtr0299689 18658416|18658416|18658416 18660044|18660044|18660044 TGTGTTC 7mer-m8 dme-miR-317-3p 2R - 18658788 18658835 5'utr CG42306 FlyBase G18764.1 AAAATATCCGATGTGTTCGAGTTTGTCCAATCTTGCCTGGCGGACGAA 5 18658824 0.974173228 2 4 27 1 0.84509804 0 0.2 0.428571429 5 0 0 7 2R:18658788-18658835 7 7.5 980 FBgn0259202 627.1666667 39.15666667 59.96 0.011958544 0.191538265 0.125083389 0 0 0 0.2 dme-miR-965-3p 7mer-m8 TACGCTT 2R 18658958 18658964 - 2R_18658958_18658964_- 0.620060229 0.620111313 0.620085771 3.61E-05 CG42306 FBtr0299689|FBtr0299688|FBtr0340393 18658416|18658416|18658416 18660044|18660044|18660044 2R - 18658921 18659000 5'utr CG42306 FlyBase G24810.1 GAACGCGAGGAGCAGCGCAATTTGCGCATGTATCGATACGCTTTAGTCAGGGTTAAATTTCCCAATGGACTCTTTATACA 88 18658964 0.985590529 12 82 683 0.951923077 1.393575203 0.240384615 0.159090909 0.288461538 88 2 3 99 2R:18658921-18659000 7 CG42306 FBtr0340393|FBtr0299688|FBtr0299689 18658416|18658416|18658416 18660044|18660044|18660044 TACGCTT 7mer-m8 dme-miR-965-3p 2R - 18658922 18658998 5'utr CG42306 FlyBase G18765.1 ACGCGAGGAGCAGCGCAATTTGCGCATGTATCGATACGCTTTAGTCAGGGTTAAATTTCCCAATGGACTCTTTATAC 52 18658964 0.983447231 7 51 398 1 1.875061263 0.306666667 0.288461538 0.506666667 52 0 0 75 2R:18658922-18658998 7 56 981 FBgn0259202 627.1666667 39.15666667 59.96 0.08929046 1.430152379 0.933955971 0 0 0 0.2 dme-miR-276a-3p 6mer3-8 AGTTCC 2R 18659853 18659858 - 2R_18659853_18659858_- 0.505766207 0.744629949 0.625198078 0.168902142 CG42306 FBtr0299689|FBtr0299688|FBtr0340393 18658416|18658416|18658416 18660044|18660044|18660044 2R - 18659843 18659918 5'utr CG42306 FlyBase G24814.1 GGCAGCGGCATGGGCACTGGCCACAAGCTGAATTCCCCCAAACAGGAGACTCCTTCAAGTAGTTCCCGCCAAAAGT 13 18659856 0.880017291 5 13 48 1 1.113943352 0.153846154 0 0 13 0 0 13 2R:18659843-18659918 6 CG42306 FBtr0340393|FBtr0299688|FBtr0299689 18658416|18658416|18658416 18660044|18660044|18660044 AGTTCC 6mer3-8 dme-miR-276a-3p 2R - 18659843 18659876 5'utr CG42306 FlyBase G18768.1 CAGGAGACTCCTTCAAGTAGTTCCCGCCAAAAGT 13 18659856 0.740489111 2 12 52 1 1.230448921 0.235294118 0.307692308 0.470588235 13 0 0 17 2R:18659843-18659876 6 9 982 FBgn0259202 627.1666667 39.15666667 59.96 0.014350252 0.229845918 0.150100067 -2 -2 -2 0.2 dme-miR-33-5p 6mer3-8 CAATGC 2R 18667587 18667592 - 2R_18667587_18667592_- 0.975299037 0.978656241 0.976977639 0.002373899 edl FBtr0086652 18667525 18667828 2R - 18667541 18667664 3'utr edl FlyBase G24818.1 AGATTGCTTCAAGTTTTCAATTCATTTTGAAAGAAAAGTGATTGGAGTGAATAGAATAAAAGATTGAAGTTACAATGCTGTCCTATTAGTTAACTAAGTTCGCATATGATGAAAATATAAAATG 1064 18667589 0.878959278 27 1022 10526 0.958064516 2.171726454 0.253225806 0.142857143 0.264516129 1064 45 7 1188 2R:18667541-18667664 6 edl FBtr0086652 18667525 18667828 CAATGC 6mer3-8 dme-miR-33-5p 2R - 18667527 18667654 3'utr edl FlyBase G18770.1 AAGTTTTCAATTCATTTTGAAAGAAAAGTGATTGGAGTGAATAGAATAAAAGATTGAAGTTACAATGCTGTCCTATTAGTTAACTAAGTTCGCATATGATGAAAATATAAAATGAAATTTTATAACTG 653 18667589 0.989705681 25 614 6020 0.94438723 2.184218085 0.270854789 0.370597243 0.576725026 653 49 5 917 2R:18667527-18667654 6 693.5 983 FBgn0023214 335.02 28.75666667 44.53 2.07002567 24.11614698 15.57377049 -3 -3 -3 0.2 dme-miR-8-3p 7mer-A1 AGTATTA 2R 18667696 18667702 - 2R_18667696_18667702_- 0.820707415 0.808907647 0.814807531 0.008343719 edl FBtr0086652 18667525 18667828 2R - 18667676 18667753 3'utr edl FlyBase G24819.1 TCTAGTTATGCTAGCTTATAATGCCTAGTCCTTAGTTCTGCTCGTCATTTAAGTATTAGCGATAATATTCTGCATTTC 42 18667699 0.815674908 17 39 392 0.9375 1.176091259 0.083333333 0.095238095 0.208333333 42 1 2 45 2R:18667676-18667753 7 edl FBtr0086652 18667525 18667828 AGTATTA 7mer-A1 dme-miR-8-3p 2R - 18667680 18667746 3'utr edl FlyBase G18771.1 ATGCTAGCTTATAATGCCTAGTCCTTAGTTCTGCTCGTCATTTAAGTATTAGCGATAATATTCTGCA 29 18667721 0.732285855 12 29 243 1 1.633468456 0.11627907 0.379310345 0.581395349 29 0 0 43 2R:18667680-18667746 7 19.5 984 FBgn0023214 335.02 28.75666667 44.53 0.05820548 0.678103628 0.437907029 -3 19 8 0.2 dme-miR-307a-3p 6mer3-8 GGTTGT 2R 18667783 18667788 - 2R_18667783_18667788_- 0.788017237 0.847399523 0.81770838 0.041989627 edl FBtr0086652 18667525 18667828 2R - 18667766 18667902 stop_codon edl FlyBase G24820.1 TTCCCGTGGGCGGCAAGATGCTCTACCGCGACTTCCGGGTGCGACTCGCCCGAGCAATGGCCCTGCTATCATAGGGATTACCCATATATCTCACGGATACCCAGTCCTCTCTATGGTTGTACATATCTCTAGGATTC 300 18667789 0.82265435 27 270 2591 0.902506964 1.095571662 0.114206128 0.163333333 0.300835655 300 10 25 324 2R:18667766-18667902 6 edl FBtr0086652 18667525 18667828 GGTTGT 6mer3-8 dme-miR-307a-3p 2R - 18667765 18667902 stop_codon edl FlyBase G18772.1 TTCCCGTGGGCGGCAAGATGCTCTACCGCGACTTCCGGGTGCGACTCGCCCGAGCAATGGCCCTGCTATCATAGGGATTACCCATATATCTCACGGATACCCAGTCCTCTCTATGGTTGTACATATCTCTAGGATTCG 209 18667789 0.922196601 20 181 1682 0.858044164 0.94320721 0.19873817 0.365384615 0.583596215 208 15 30 272 2R:18667765-18667902 6 192.5 985 FBgn0023214 335.02 28.75666667 44.53 0.574592562 6.694099919 4.322928363 1 1 1 0.2 dme-miR-1008-3p 8mer-A1 AGCTGTGA 2R 18704858 18704865 + 2R_18704858_18704865_+ 0.494638469 0.451807676 0.473223072 0.030285949 Sik3 FBtr0340388|FBtr0344259|FBtr0304025|FBtr0344258|FBtr0304026 18704794|18704794|18704794|18704794|18704794 18705805|18705805|18705805|18705805|18705805 2R + 18704800 18704916 3'utr Sik3 FlyBase G17294.1 TGGAATCCCGCCCTGCTAGCTACCCAAAATGACTACTCGCCTTGCCTAAACTCTGCGTAGCTGTGATTAAAGTCGATATGTACGATATAGCCATCCTAAACCAGTAGCAATTGGACA 73 18704857 0.984407599 15 66 516 0.895348837 1.284430734 0.290697674 0.109589041 0.244186047 73 6 3 77 2R:18704800-18704916 8 Sik3 FBtr0304026|FBtr0340388|FBtr0344259|FBtr0304025|FBtr0344258 18704794|18704794|18704794|18704794|18704794 18705805|18705805|18705805|18705805|18705805 AGCTGTGA 8mer-A1 dme-miR-1008-3p 2R + 18704825 18704920 3'utr Sik3 FlyBase G13180.1 AAAATGACTACTCGCCTTGCCTAAACTCTGCGTAGCTGTGATTAAAGTCGATATGTACGATATAGCCATCCTAAACCAGTAGCAATTGGACAGGAG 49 18704857 0.98051844 13 45 320 0.958333333 1.361727836 0.222222222 0.306122449 0.527777778 49 1 2 69 2R:18704825-18704920 8 45 986 FBgn0262103 424.8866667 8.64 13.18 0.105910596 5.208333333 3.414264036 1 1 1 0.2 dme-miR-308-3p 8mer-m1 CTGTGATT 2R 18705649 18705656 + 2R_18705649_18705656_+ 0.382457662 0.381898124 0.382177893 0.000395697 Sik3 FBtr0340388|FBtr0344259|FBtr0304025|FBtr0344258|FBtr0304026 18704794|18704794|18704794|18704794|18704794 18705805|18705805|18705805|18705805|18705805 2R + 18705602 18705701 3'utr Sik3 FlyBase G17298.1 ACGGATTAAACACAACATTGATAAATCTATTTTTTAATGAAAGACTGCTGTGATTTTACATGTAATTAATTTAGAGCGAAAGAAGGTAGGAGTAAATAAC 277 18705647 0.987338983 20 271 2392 0.973988439 2.527629901 0.046242775 0.198555957 0.358381503 277 9 0 337 2R:18705602-18705701 8 Sik3 FBtr0304026|FBtr0340388|FBtr0344259|FBtr0304025|FBtr0344258 18704794|18704794|18704794|18704794|18704794 18705805|18705805|18705805|18705805|18705805 CTGTGATT 8mer-m1 dme-miR-308-3p 2R + 18705620 18705693 3'utr Sik3 FlyBase G13186.1 TGATAAATCTATTTTTTAATGAAAGACTGCTGTGATTTTACATGTAATTAATTTAGAGCGAAAGAAGGTAGGAG 262 18705647 0.987533432 15 259 2301 0.984415584 2.57863921 0.051948052 0.351145038 0.558441558 262 6 0 379 2R:18705620-18705693 8 261.5 987 FBgn0262103 424.8866667 8.64 13.18 0.61545824 30.2662037 19.84066768 2 2 2 0.2 dme-miR-283-5p 8mer-m1 TGATATTT 2R 18774338 18774345 + 2R_18774338_18774345_+ 0.480359339 0.451639192 0.465999265 0.020308177 Mctp FBtr0346955|FBtr0330004|FBtr0110970|FBtr0345950|FBtr0330005|FBtr0110971 18773742|18773952|18773742|18773742|18773742|18773742 18774667|18774667|18774667|18774824|18774667|18774667 2R + 18774280 18774507 3'utr Mctp FlyBase G17318.1 AGATTCCTTTTTGCGCGAATCCAAATGCGATTAATTATTTATTGTGTATTTCAATTTGTGATATTTTCAAAGAATTTTGCAACTAGGCTTACTACTTAATGTGACTTAAACCACGGAAGCTCCGTACCGCACAGAAGTTTCCCCCAAACTCCATTTACAATTTACCACTCGATTGCACTCGACTCGTTTAAGGACGCTTTTTCATTATATACCTTTACATATATACCT 159 18774334 0.92636924 40 153 1654 0.970149254 2.290034611 0.114427861 0.194968553 0.36318408 159 6 0 195 2R:18774280-18774507 8 Mctp FBtr0330005|FBtr0110971|FBtr0346955|FBtr0330004|FBtr0110970|FBtr0345950 18773742|18773742|18773742|18773952|18773742|18773742 18774667|18774667|18774667|18774667|18774667|18774824 TGATATTT 8mer-m1 dme-miR-283-5p 2R + 18774316 18774405 3'utr Mctp FlyBase G13204.1 ATTTATTGTGTATTTCAATTTGTGATATTTTCAAAGAATTTTGCAACTAGGCTTACTACTTAATGTGACTTAAACCACGGAAGCTCCGTA 108 18774334 0.764711591 14 99 1191 0.915584416 1.848189117 0.168831169 0.342592593 0.538961039 108 12 1 141 2R:18774316-18774405 8 87.5 988 FBgn0034389 335.3666667 10.34333333 15.83333333 0.260908458 8.459555269 5.526315789 4 4 4 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2R 18794753 18794758 - 2R_18794753_18794758_- 0.988927045 0.987296975 0.98811201 0.001152584 MFS15 FBtr0086636|FBtr0086637 18794616|18794616 18794808|18794808 2R - 18794690 18794794 3'utr MFS15 FlyBase G24838.1 CGTGGCCTAAGGATTGGTTGTAGATGTGAAACATTTGTACCTTGAAGGCGAAGCATTCCTTGGAATTGATGAATCGCAATTAGTATCGTATTACTAGTTATACAC 155 18794759 0.843930028 15 151 1016 0.978142077 2.252853031 0.398907104 0.15483871 0.284153005 155 4 0 179 2R:18794690-18794794 6 MFS15 FBtr0086637|FBtr0086636 18794616|18794616 18794808|18794808 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2R - 18794689 18794791 3'utr MFS15 FlyBase G18790.1 GGCCTAAGGATTGGTTGTAGATGTGAAACATTTGTACCTTGAAGGCGAAGCATTCCTTGGAATTGATGAATCGCAATTAGTATCGTATTACTAGTTATACACG 104 18794759 0.977631924 14 101 669 0.972222222 2.146128036 0.381944444 0.317307692 0.506944444 104 4 0 140 2R:18794689-18794791 6 114.5 989 FBgn0034392 393.6666667 26.16666667 39.91 0.290855207 4.375796178 2.868955149 1 1 1 0.2 dme-miR-2a-2-5p 6mer3-8 TGATGA 2R 18797093 18797098 - 2R_18797093_18797098_- 0.407060835 0.413813519 0.410437177 0.00477488 l(2)08717 FBtr0345426 18796973 18797478 2R - 18797070 18797124 3'utr l(2)08717 FlyBase G24849.1 TTAAGTTAGGCATTAGCGAAAACTTGTGATGAAAAAAGTAAACTAAAAAAGGCAA 467 18797101 0.808376542 6 422 2218 0.912162162 1.119609903 0.089527027 0.207708779 0.375 467 12 40 540 2R:18797070-18797124 6 l(2)08717 FBtr0345426 18796973 18797478 TGATGA 6mer3-8 dme-miR-2a-2-5p 2R - 18797069 18797122 3'utr l(2)08717 FlyBase G18796.1 AAGTTAGGCATTAGCGAAAACTTGTGATGAAAAAAGTAAACTAAAAAAGGCAAA 334 18797101 0.801552329 5 297 1513 0.902083333 1.117973956 0.070833333 0.317365269 0.525 334 15 32 433 2R:18797069-18797122 6 397 990 FBgn0010651 461.1766667 23.46 35.57 0.860841471 16.92242114 11.16109081 3 3 3 0.2 dme-miR-252-5p 6mer3-8 GTACTT 2R 18821341 18821346 + 2R_18821341_18821346_+ 0.993972662 0.99927839 0.996625526 0.003751696 Phb2 FBtr0086616|FBtr0086615|FBtr0086614|FBtr0112863 18821290|18821290|18821290|18821290 18821839|18821839|18821839|18821839 2R + 18821308 18821358 3'utr Phb2 FlyBase G17331.1 CAAAAAGAGTTTACTTTTAAGTTGAAAACACTTGTACTTTTGGTTTCAATC 20 18821340 0.98698034 5 20 181 1 1.380211242 0.166666667 0.2 0.333333333 20 0 0 24 2R:18821308-18821358 6 Phb2 FBtr0086615|FBtr0086614|FBtr0112863|FBtr0086616 18821290|18821290|18821290|18821290 18821839|18821839|18821839|18821839 GTACTT 6mer3-8 dme-miR-252-5p 2R + 18821326 18821393 3'utr Phb2 FlyBase G13214.1 AAGTTGAAAACACTTGTACTTTTGGTTTCAATCACATTGGCCAAAACTTAGACATAGCCTTCATAATT 22 18821340 0.854977068 9 22 164 1 1.531478917 0.294117647 0.454545455 0.647058824 22 0 0 34 2R:18821326-18821393 6 17.5 991 FBgn0010551 1156.073333 96.49666667 146.7133333 0.015137448 0.181353415 0.119280229 1 1 1 0.2 dme-miR-986-5p 6mer2-7 TTCGAG 2R 18821554 18821559 + 2R_18821554_18821559_+ 0.915736657 0.99997493 0.957855794 0.059565402 Phb2 FBtr0086616|FBtr0112861|FBtr0086615|FBtr0086614|FBtr0112863 18821290|18821508|18821290|18821290|18821290 18821839|18821839|18821839|18821839|18821839 2R + 18821543 18821595 3'utr Phb2 FlyBase G17334.1 ATTGAAATTCCTTCGAGCTAGAGCCTAAGTACCGTTTAGTTTTAACCACTCCC 7 18821550 0.985069156 3 6 50 0.875 0.84509804 0.125 0.142857143 0.25 7 1 0 7 2R:18821543-18821595 6 Phb2 FBtr0086615|FBtr0086614|FBtr0112863|FBtr0086616|FBtr0112861 18821290|18821290|18821290|18821290|18821508 18821839|18821839|18821839|18821839|18821839 TTCGAG 6mer2-7 dme-miR-986-5p 2R + 18821543 18821573 3'utr Phb2 FlyBase G13215.1 ATTGAAATTCCTTCGAGCTAGAGCCTAAGTA 6 18821551 0.66355227 3 5 34 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2R:18821543-18821573 6 5 992 FBgn0010551 1156.073333 96.49666667 146.7133333 0.004324985 0.051815261 0.034080065 4 3 3.5 0.2 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 18822136 18822143 + 2R_18822136_18822143_+ 0.54283332 0.598325088 0.570579204 0.039238628 Phb2 FBtr0112862 18822099 18822250 2R + 18822046 18822155 stop_codon Phb2 FlyBase G17337.1 GAAGGAGAAGAACGTGGGCAACGTGGCGAGCAGCATGGCCGAGCGGATGATGTGATCCACACCTTAGCGGGGGCTTCCTGTCAAGATCCTAGTACAAAGCGCATACAGAA 31 18822135 0.971134777 7 24 133 0.815789474 1.190331698 0.342105263 0.193548387 0.342105263 31 6 1 31 2R:18822046-18822155 8 Phb2 FBtr0112862 18822099 18822250 AGTACAAA 8mer-A1 dme-miR-305-5p 2R + 18822109 18822161 3'utr Phb2 FlyBase G13218.1 TTAGCGGGGGCTTCCTGTCAAGATCCTAGTACAAAGCGCATACAGAACAGAGC 23 18822135 0.951850554 5 15 116 0.676470588 0.884606581 0.235294118 0.347826087 0.558823529 23 9 2 23 2R:18822109-18822161 8 21.5 993 FBgn0010551 1156.073333 96.49666667 146.7133333 0.018597436 0.222805624 0.146544281 1 1 1 0.2 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2R 18822378 18822385 - 2R_18822378_18822385_- 0.630700533 0.630796848 0.63074869 6.81E-05 CG15097 FBtr0303237|FBtr0330604|FBtr0086630|FBtr0330605 18822186|18822186|18822186|18822186 18822959|18822608|18822959|18822581 2R - 18822327 18822400 3'utr CG15097 FlyBase G24859.1 ACACACACACATGTTTCTAGTCAAGATCTCTCACACACACACAACATGGGAATGCCGCGGGGACACAACTCCTG 133 18822386 0.999702155 8 127 871 0.960784314 1.69019608 0.019607843 0.135338346 0.248366013 133 4 2 147 2R:18822327-18822400 8 CG15097 FBtr0330605|FBtr0086630|FBtr0330604|FBtr0303237 18822186|18822186|18822186|18822186 18822581|18822959|18822608|18822959 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R - 18822357 18822400 3'utr CG15097 FlyBase G18804.1 ACACACACACATGTTTCTAGTCAAGATCTCTCACACACACACAA 74 18822386 0.83947615 9 71 461 0.965217391 2.045322979 0.017391304 0.432432432 0.634782609 74 4 0 111 2R:18822357-18822400 8 101 994 FBgn0034396 75.66666667 3.096666667 4.676666667 1.334801762 32.61571582 21.59657876 1 1 1 0.2 dme-miR-986-5p 6mer2-7 TTCGAG 2R 18837284 18837289 - 2R_18837284_18837289_- 0.793400255 0.832541217 0.812970736 0.027676796 CG15099 FBtr0086628 18836819 18837346 2R - 18837228 18837322 3'utr CG15099 FlyBase G24876.1 ACGCAGTCGCAGATCCAAGCGAGTGGGTCACACTTCGAGCTCAAGCTGAACCTGAACCTAGGTATGGAGTCTGCCATGGAGTCGGGCAGTACTGG 35 18837288 0.951119793 10 33 143 0.972222222 1.544068044 0.361111111 0.058823529 0.111111111 34 1 0 35 2R:18837228-18837322 6 CG15099 FBtr0086628 18836819 18837346 TTCGAG 6mer2-7 dme-miR-986-5p 2R - 18837233 18837306 3'utr CG15099 FlyBase G18819.1 AAGCGAGTGGGTCACACTTCGAGCTCAAGCTGAACCTGAACCTAGGTATGGAGTCTGCCATGGAGTCGGGCAGT 16 18837288 0.717558608 7 15 74 0.947368421 1.255272505 0.421052632 0.1875 0.315789474 16 1 0 18 2R:18837233-18837306 6 16.5 995 FBgn0034400 3071.393333 43.47333333 66.98666667 0.005372155 0.379543015 0.246317675 -1 -1 -1 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 18846948 18846955 - 2R_18846948_18846955_- 0.62348781 0.625356875 0.624422343 0.001321653 CG15100 FBtr0086627 18846856 18847082 2R - 18846901 18847065 3'utr CG15100 FlyBase G24926.1 TAAAAATCACGCTGGACGCTTTTACCTCAGCCCTTTTAATCAGGCATTCGATGGCAAATCTTTAGTCACGGACTGGCACAGTTCAATTCATCTCCCATAAGTTTTGCGTTTGCATTTAACAACCTTTTGTATTTATTCGAAGTATGGCTAAATATTCAGTTAGTA 38 18846956 0.797852664 12 38 298 1 1.643452676 0.113636364 0.105263158 0.227272727 38 0 0 44 2R:18846901-18847065 8 CG15100 FBtr0086627 18846856 18847082 TGCATTTA 8mer-A1 dme-miR-277-3p 2R - 18846928 18846967 3'utr CG15100 FlyBase G18855.1 AAGTTTTGCGTTTGCATTTAACAACCTTTTGTATTTATTC 11 18846956 0.989241882 2 10 103 0.923076923 1.079181246 0 0.181818182 0.307692308 11 1 0 12 2R:18846928-18846967 8 12.5 996 FBgn0034401 874.54 30.91333333 47.1 0.014293228 0.404356265 0.265392781 1 1 1 0.2 dme-miR-14-3p 7mer-m8 AAGACTG 2R 18971406 18971412 - 2R_18971406_18971412_- 0.667276915 0.671781587 0.669529251 0.003185304 CG15107 FBtr0331978|FBtr0086600 18971307|18971307 18971590|18971590 2R - 18971383 18971423 3'utr CG15107 FlyBase G24977.1 TAGTCGTTTTTAAGACTGTTGTTATGCATATCGTTCGACGA 9 18971403 0.633926329 4 7 86 0.818181818 0.954242509 0.090909091 0.222222222 0.363636364 9 2 0 9 2R:18971383-18971423 7 CG15107 FBtr0086600|FBtr0331978 18971307|18971307 18971590|18971590 AAGACTG 7mer-m8 dme-miR-14-3p 2R - 18971401 18971422 3'utr CG15107 FlyBase G18891.1 AGTCGTTTTTAAGACTGTTGTT 5 18971405 0.788339959 2 2 27 0.444444444 0.602059991 0.777777778 0.4 0.666666667 5 5 0 4 2R:18971401-18971422 7 6.5 997 FBgn0041702 455.9833333 51.29666667 78.86 0.014254907 0.126713887 0.08242455 -9 -7 -8 0.2 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2R 19133203 19133208 + 2R_19133203_19133208_+ 0.999990814 0.999985705 0.999988259 3.61E-06 botv FBtr0086579 19133117 19133706 2R + 19133050 19133222 stop_codon botv FlyBase G17377.1 CGAGCGGACTCCATTCTCTTCAAGACGCGCATCCCGCACGACAAGCAAAAGTGCTTCAAGTACATCTAGTCGTACAACTGATCCCAGAATCCCTATTCCGACAAAGGCGGCCACTTCACTTATTATAACGAGGTGATCACCAGCTGAATGACTTCTAGTTGTAAGTAAAACTT 137 19133205 0.787927289 25 131 885 0.942675159 2.170261715 0.070063694 0.102189781 0.21656051 137 9 0 148 2R:19133050-19133222 6 botv FBtr0086579 19133117 19133706 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 19133045 19133224 stop_codon botv FlyBase G13244.1 AGTACCGAGCGGACTCCATTCTCTTCAAGACGCGCATCCCGCACGACAAGCAAAAGTGCTTCAAGTACATCTAGTCGTACAACTGATCCCAGAATCCCTATTCCGACAAAGGCGGCCACTTCACTTATTATAACGAGGTGATCACCAGCTGAATGACTTCTAGTTGTAAGTAAAACTTAT 68 19133205 0.979698851 15 61 440 0.91 1.481920138 0.13 0.338235294 0.55 68 7 2 91 2R:19133045-19133224 6 57.5 998 FBgn0027535 455.35 15.33 23.50666667 0.126276491 3.750815395 2.446114577 -2 -2 -2 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 2R 19133618 19133623 + 2R_19133618_19133623_+ 0.998686504 0.995240261 0.996963382 0.002436831 botv FBtr0086579 19133117 19133706 2R + 19133570 19133660 3'utr botv FlyBase G17380.1 AGGAAATAGTCTTGAGTAGAGATACCAAATCAAATTTTGAGACTTTATTGTGTTTGCTTAATTAGCATAAGTTGTGTACCGATTTTGAATT 36 19133607 0.960860407 12 35 330 1 1.633468456 0.162790698 0.111111111 0.255813953 36 0 0 43 2R:19133570-19133660 6 botv FBtr0086579 19133117 19133706 TGTGTT 6mer3-8 dme-miR-317-3p 2R + 19133570 19133656 3'utr botv FlyBase G13246.1 AGGAAATAGTCTTGAGTAGAGATACCAAATCAAATTTTGAGACTTTATTGTGTTTGCTTAATTAGCATAAGTTGTGTACCGATTTTG 14 19133606 0.984779594 11 14 117 1 1.342422681 0.454545455 0.428571429 0.636363636 14 0 0 22 2R:19133570-19133656 6 15.5 999 FBgn0027535 455.35 15.33 23.50666667 0.03403975 1.011089367 0.659387408 11 12 11.5 0.2 dme-miR-79-3p 7mer-m8 TAGCTTT 2R 19133967 19133973 - 2R_19133967_19133973_- 0.328224371 0.573713276 0.450968824 0.173586866 CG15118 FBtr0086592|FBtr0086590|FBtr0086591|FBtr0113096 19133725|19133725|19133725|19133725 19134214|19134214|19134214|19134530 2R - 19133948 19134005 3'utr CG15118 FlyBase G24986.1 ATACCATGTATCCAAAGTAGTCCTTGTAGTTGTAGCTTTTGCATTGAATCCGGTATCT 17 19133981 0.753851525 10 16 145 0.947368421 0.954242509 0 0.117647059 0.210526316 17 0 1 18 2R:19133948-19134005 7 CG15118 FBtr0113096|FBtr0086591|FBtr0086590|FBtr0086592 19133725|19133725|19133725|19133725 19134530|19134214|19134214|19134214 TAGCTTT 7mer-m8 dme-miR-79-3p 2R - 19133946 19134000 3'utr CG15118 FlyBase G18899.1 ATGTATCCAAAGTAGTCCTTGTAGTTGTAGCTTTTGCATTGAATCCGGTATCTAT 7 19133982 0.993850904 5 6 77 0.888888889 0.903089987 0.111111111 0.285714286 0.444444444 7 1 0 8 2R:19133946-19134000 7 9.5 1000 FBgn0034418 690.5133333 34.72333333 53.01 0.013757881 0.273591245 0.17921147 8 9 8.5 0.2 dme-miR-283-5p 7mer-A1 GATATTA 2R 19140920 19140926 + 2R_19140920_19140926_+ 0.782831868 0.780434212 0.78163304 0.00169543 CG15111 FBtr0086581|FBtr0086580 19140905|19140905 19141034|19141034 2R + 19140871 19140934 stop_codon CG15111 FlyBase G17386.1 AAGTTTGTGGAGAACTACCGTGACGCCGTATACTAGGTGCGATCAACTGGATATTAATTTATGT 13 19140914 0.76680705 6 11 71 0.875 1.146128036 0.25 0.230769231 0.375 13 2 0 14 2R:19140871-19140934 7 CG15111 FBtr0086580|FBtr0086581 19140905|19140905 19141034|19141034 GATATTA 7mer-A1 dme-miR-283-5p 2R + 19140894 19140935 stop_codon CG15111 FlyBase G13251.1 CGCCGTATACTAGGTGCGATCAACTGGATATTAATTTATGTA 5 19140918 0.943838026 3 5 39 1 0.903089987 0 0.6 0.75 5 0 0 8 2R:19140894-19140935 7 5.5 1001 FBgn0034419 145.4233333 10.22333333 15.81333333 0.037820616 0.537985002 0.347807757 6 2 4 0.2 dme-miR-968-5p 6mer3-8 ACTACT 2R 19162388 19162393 + 2R_19162388_19162393_+ 0.918661375 0.999954626 0.959308001 0.057482973 ena FBtr0100176|FBtr0086582|FBtr0114623|FBtr0340450|FBtr0086583|FBtr0086584 19161687|19161687|19161687|19161687|19161687|19161687 19162598|19162598|19162598|19163705|19162598|19162598 2R + 19162374 19162480 3'utr ena FlyBase G17408.1 TTTAATATATATGGACTACTCATTAAACTAACCTAAAGGGAACTAGTATTACGACTCAAAAACGAAATGAAAACAATTCCACAAACGTCATCCATCAAAGCTCCTGA 41 19162388 0.952222152 13 38 244 0.918367347 1.653212514 0.020408163 0.170731707 0.306122449 41 4 0 45 2R:19162374-19162480 6 ena FBtr0086583|FBtr0086584|FBtr0114623|FBtr0340450|FBtr0100176|FBtr0086582 19161687|19161687|19161687|19161687|19161687|19161687 19162598|19162598|19162598|19163705|19162598|19162598 ACTACT 6mer3-8 dme-miR-968-5p 2R + 19162372 19162453 3'utr ena FlyBase G13273.1 GGTTTAATATATATGGACTACTCATTAAACTAACCTAAAGGGAACTAGTATTACGACTCAAAAACGAAATGAAAACAATTCC 36 19162386 0.981496756 11 35 251 0.979591837 1.681241237 0 0.305555556 0.489795918 36 1 0 48 2R:19162372-19162453 6 27.5 1002 FBgn0000578 7091.176667 212.0766667 326.4733333 0.003878059 0.129670088 0.084233526 0 2 1 0.2 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA 2R 19226817 19226824 + 2R_19226817_19226824_+ 0.578102872 0.575859408 0.57698114 0.001586394 hppy FBtr0340454|FBtr0340456|FBtr0086504|FBtr0340455|FBtr0086503 19226138|19226138|19226138|19226138|19226138 19227193|19227193|19227193|19227193|19227193 2R + 19226762 19226838 3'utr hppy FlyBase G17434.1 GGTTAAACTGCTTTCGATTGGCTCAAAACCGCAACGGAAAATCAAGAACGAGAAATTGAAGAATGCGATATAGGATG 60 19226817 0.932200672 4 58 215 0.96969697 1.505149978 0.090909091 0.1 0.181818182 60 1 1 64 2R:19226762-19226838 8 hppy FBtr0086503|FBtr0340454|FBtr0340456|FBtr0086504|FBtr0340455 19226138|19226138|19226138|19226138|19226138 19227193|19227193|19227193|19227193|19227193 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p 2R + 19226805 19226840 3'utr hppy FlyBase G13296.1 AAGAACGAGAAATTGAAGAATGCGATATAGGATGAT 38 19226817 0.941939091 2 37 138 0.96 1.681241237 0.18 0.315789474 0.48 38 2 0 48 2R:19226805-19226840 8 46 1003 FBgn0263395 662.23 18.48666667 28.52 0.069462271 2.488279841 1.612903226 0 0 0 0.2 dme-miR-999-3p 8mer-A1 AGTTAACA 2R 19307854 19307861 - 2R_19307854_19307861_- 0.614058779 0.643044166 0.628551473 0.020495773 EndoB FBtr0113097|FBtr0113098|FBtr0086558|FBtr0086559 19307445|19307445|19307445|19307445 19308386|19308386|19308386|19308386 2R - 19307823 19307866 3'utr EndoB FlyBase G25011.1 ATCTTAGTTAACAAGCGAAATTCTCTGTGCTTTACTATATATCC 10 19307836 0.986357798 6 10 89 1 1.079181246 0.25 0.2 0.333333333 10 0 0 12 2R:19307823-19307866 8 EndoB FBtr0086559|FBtr0086558|FBtr0113098|FBtr0113097 19307445|19307445|19307445|19307445 19308386|19308386|19308386|19308386 AGTTAACA 8mer-A1 dme-miR-999-3p 2R - 19307821 19307874 3'utr EndoB FlyBase G18922.1 TTGTCAATATCTTAGTTAACAAGCGAAATTCTCTGTGCTTTACTATATATCCTA 6 19307838 0.985975524 4 6 56 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 2R:19307821-19307874 8 5 1004 FBgn0034433 435.3966667 24.15666667 36.94666667 0.011483781 0.2069822 0.135330206 -25 -23 -24 0.2 dme-miR-12-5p 8mer-A1 AATACTCA 2R 19308294 19308301 - 2R_19308294_19308301_- 0.64355077 0.643568705 0.643559737 1.27E-05 EndoB FBtr0113097|FBtr0113098|FBtr0086558|FBtr0086559 19307445|19307445|19307445|19307445 19308386|19308386|19308386|19308386 2R - 19308283 19308315 3'utr EndoB FlyBase G25012.1 ACTCCAAGTACGGCAATACTCATATGTTAAGAA 6 19308299 0.948809333 3 5 26 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2R:19308283-19308315 8 EndoB FBtr0086559|FBtr0086558|FBtr0113098|FBtr0113097 19307445|19307445|19307445|19307445 19308386|19308386|19308386|19308386 AATACTCA 8mer-A1 dme-miR-12-5p 2R - 19308232 19308312 3'utr EndoB FlyBase G18923.1 CCAAGTACGGCAATACTCATATGTTAAGAAAGCAGACACGATCGAGAGAAGGGAACGGCAATTGGACAATTAAAGGATGCG 11 19308290 0.940412771 5 11 44 1 1.113943352 0.076923077 0.181818182 0.307692308 11 0 0 13 2R:19308232-19308312 8 6.5 1005 FBgn0034433 435.3966667 24.15666667 36.94666667 0.014928915 0.269076859 0.175929267 -2 -11 -6.5 0.2 dme-miR-968-5p 7mer-m8 ACTACTT 2R 19367289 19367295 - 2R_19367289_19367295_- 0.498141491 0.492670734 0.495406113 0.00386844 CG9416 FBtr0334008|FBtr0086555 19367246|19367246 19367478|19367478 2R - 19367286 19367393 3'utr CG9416 FlyBase G25019.1 ATGGAGTGTACCAATTTTACCTAATCCAACGAACAAAGTGTCGATAAGCATGGCACGTCCTAAATTGTATTAGTATTTACGATTAGAACACTGTAGTTACTACTTTGT 21 19367301 0.959281365 12 21 138 1 1.414973348 0.307692308 0.238095238 0.384615385 21 0 0 26 2R:19367286-19367393 7 CG9416 FBtr0334008|FBtr0086555 19367246|19367246 19367478|19367478 ACTACTT 7mer-m8 dme-miR-968-5p 2R - 19367280 19367313 3'utr CG9416 FlyBase G18926.1 GATTAGAACACTGTAGTTACTACTTTGTAATTTT 6 19367302 0.986115163 3 5 54 0.818181818 0.954242509 0.272727273 0.5 0.727272727 6 2 0 9 2R:19367280-19367313 7 6 1006 FBgn0034438 3 0.123333333 0.186666667 2 48.64864865 32.14285714 6 7 6.5 0.2 dme-miR-11-3p 7mer-m1 TGTGATG 2R 19392219 19392225 - 2R_19392219_19392225_- 0.60260605 0.603198764 0.602902407 0.000419173 SdhA FBtr0086553|FBtr0086552|FBtr0086554 19391861|19391861|19391861 19392398|19392398|19392398 2R - 19392214 19392246 3'utr SdhA FlyBase G25033.1 CGGCAGCGGTTCCGGGCATTTTGTGATGAAACG 8 19392226 0.6701727 2 8 54 1 0.903089987 0.25 0 0 8 0 0 8 2R:19392214-19392246 7 SdhA FBtr0086553|FBtr0086552|FBtr0086554 19391861|19391861|19391861 19392398|19392398|19392398 TGTGATG 7mer-m1 dme-miR-11-3p 2R - 19392214 19392242 3'utr SdhA FlyBase G18934.1 AGCGGTTCCGGGCATTTTGTGATGAAACG 6 19392227 0.698667055 3 6 39 1 0.77815125 0.166666667 0 0 6 0 0 6 2R:19392214-19392242 7 7 1007 FBgn0261439 831.86 37.47666667 57.27666667 0.008414878 0.186782887 0.122213816 1 2 1.5 0.2 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 2R 19430692 19430697 - 2R_19430692_19430697_- 0.690635288 0.610578008 0.650606648 0.05660906 Fak FBtr0301883|FBtr0086542|FBtr0301882|FBtr0114605|FBtr0086543|FBtr0086544 19430657|19430657|19430657|19430657|19430657|19430657 19431105|19431105|19431105|19431105|19431105|19431105 2R - 19430669 19430712 3'utr Fak FlyBase G25076.1 CGAAGCTAATTATTTTGGTGCAAGGTTCAATCACAAAAAATAAA 6 19430698 0.986234677 4 6 48 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 2R:19430669-19430712 6 Fak FBtr0086543|FBtr0086544|FBtr0301882|FBtr0114605|FBtr0301883|FBtr0086542 19430657|19430657|19430657|19430657|19430657|19430657 19431105|19431105|19431105|19431105|19431105|19431105 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 2R - 19430676 19430713 3'utr Fak FlyBase G18957.1 TCGAAGCTAATTATTTTGGTGCAAGGTTCAATCACAAA 7 19430697 0.801824257 2 7 60 1 1 0.2 0.428571429 0.6 7 0 0 10 2R:19430676-19430713 6 6 1008 FBgn0020440 860.4633333 21.11 32.3 0.006972987 0.284225486 0.185758514 1 0 0.5 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 2R 19430739 19430745 - 2R_19430739_19430745_- 0.521223819 0.521222494 0.521223156 9.19E-07 Fak FBtr0301883|FBtr0086542|FBtr0301882|FBtr0114605|FBtr0086543|FBtr0086544 19430657|19430657|19430657|19430657|19430657|19430657 19431105|19431105|19431105|19431105|19431105|19431105 2R - 19430726 19430783 3'utr Fak FlyBase G25077.1 TTCATCATCAATTCGGGTGTGTTTTAAGACATTTATATTGTGATTTATAGTTTACCAT 28 19430746 0.714967241 10 27 306 0.971428571 1.531478917 0.171428571 0.214285714 0.371428571 28 1 0 34 2R:19430726-19430783 7 Fak FBtr0086543|FBtr0086544|FBtr0301882|FBtr0114605|FBtr0301883|FBtr0086542 19430657|19430657|19430657|19430657|19430657|19430657 19431105|19431105|19431105|19431105|19431105|19431105 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 19430718 19430758 3'utr Fak FlyBase G18958.1 AAGACATTTATATTGTGATTTATAGTTTACCATTATAGGCT 20 19430747 0.587276912 8 18 239 0.923076923 1.079181246 0.230769231 0.2 0.384615385 20 1 1 24 2R:19430718-19430758 7 22.5 1009 FBgn0020440 860.4633333 21.11 32.3 0.026148703 1.065845571 0.696594427 1 2 1.5 0.2 dme-miR-307a-3p 6mer2-7 GTTGTG 2R 19485063 19485068 + 2R_19485063_19485068_+ 0.654946071 0.653247832 0.654096951 0.001200879 par-1 FBtr0330244 19483406 19485686 2R + 19484995 19485139 3'utr par-1 FlyBase G17637.1 AAAACATACCTTAGGGAGGAGCGATCTCAAGTGAGATGTAGAAAAGAAAAAGACGACCATTTATCTAAGTTGTGGAGGCTCAAAAAACAGTCTATATATATATACCAAAACATATACAAAGTTGCACATCAAGTTGTCTTCATCA 114 19485067 0.80210614 11 113 519 1 2.139879086 0.028985507 0.192982456 0.333333333 114 0 0 138 2R:19484995-19485139 6 par-1 FBtr0330244 19483406 19485686 GTTGTG 6mer2-7 dme-miR-307a-3p 2R + 19485042 19485109 3'utr par-1 FlyBase G13427.2 AAAAGACGACCATTTATCTAAGTTGTGGAGGCTCAAAAAACAGTCTATATATATATACCAAAACATAT 100 19485067 0.950925639 3 99 431 0.992907801 2.146128036 0 0.33 0.524822695 100 1 0 140 2R:19485042-19485109 6 96.5 1010 FBgn0260934 5641.8 137.7133333 211.53 0.01710447 0.700730987 0.456200066 -4 -4 -4 0.2 dme-miR-317-3p 6mer2-7 GTGTTC 2R 19485562 19485567 - 2R_19485562_19485567_- 0.831863983 0.852847397 0.84235569 0.014837504 TBCB FBtr0086502 19485492 19485802 2R - 19485554 19485603 3'utr TBCB FlyBase G25102.1 AATTCTATAATCGGCTTTATCATAACTGATTTAATGGTGTTCTCAATCAT 36 19485569 0.786405796 8 36 360 1 1.612783857 0.170731707 0.083333333 0.195121951 36 0 0 41 2R:19485554-19485603 6 TBCB FBtr0086502 19485492 19485802 GTGTTC 6mer2-7 dme-miR-317-3p 2R - 19485554 19485606 3'utr TBCB FlyBase G18982.1 GTAAATTCTATAATCGGCTTTATCATAACTGATTTAATGGTGTTCTCAATCAT 21 19485569 0.80556756 6 20 206 0.965517241 1.447158031 0.206896552 0.285714286 0.482758621 21 1 0 28 2R:19485554-19485606 6 24 1011 FBgn0034451 695.71 73.74666667 112.8533333 0.034497132 0.325438438 0.212665406 2 2 2 0.2 dme-miR-283-5p 6mer3-8 TGATAT 2R 19485631 19485636 + 2R_19485631_19485636_+ 0.940319078 0.986587122 0.9634531 0.032716417 par-1 FBtr0330244 19483406 19485686 2R + 19485611 19485671 3'utr par-1 FlyBase G17639.1 AATCATGTTGTAAGAATATCTGATATACATACATACATAGATGTTTTAATTAATAAATAAA 5 19485634 0.96577454 3 5 37 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 2R:19485611-19485671 6 par-1 FBtr0330244 19483406 19485686 TGATAT 6mer3-8 dme-miR-283-5p 2R + 19485607 19485647 3'utr par-1 FlyBase G13429.1 GAATAATCATGTTGTAAGAATATCTGATATACATACATACA 12 19485634 0.756985156 5 12 79 1 1.301029996 0.1 0.583333333 0.75 12 0 0 20 2R:19485607-19485647 6 7 1012 FBgn0260934 5641.8 137.7133333 211.53 0.001240739 0.050830227 0.033092233 -3 -3 -3 0.2 dme-miR-14-3p 6mer3-8 AAGACT 2R 19485734 19485739 - 2R_19485734_19485739_- 0.696424524 0.814764234 0.755594379 0.083678804 TBCB FBtr0086502 19485492 19485802 2R - 19485648 19485785 3'utr TBCB FlyBase G25103.1 ACACACAGGTCACACAATCTCGCATCGCACATGCCACCTTAAACAGAAGACTTACGAACCGCTAAAACTATTTGTACGCATGAAAGAACATTACAAATTATAGTTATGCCATTTTTTATTTATTAATTAAAACATCTA 65 19485747 0.970363389 19 52 310 0.825 1.120573931 0.0875 0.215384615 0.3625 65 10 4 66 2R:19485648-19485785 6 TBCB FBtr0086502 19485492 19485802 AAGACT 6mer3-8 dme-miR-14-3p 2R - 19485700 19485782 3'utr TBCB FlyBase G18983.1 CACAGGTCACACAATCTCGCATCGCACATGCCACCTTAAACAGAAGACTTACGAACCGCTAAAACTATTTGTACGCATGAAAG 27 19485747 0.948789915 6 24 103 0.902439024 1.568201724 0.024390244 0.37037037 0.585365854 27 4 0 37 2R:19485700-19485782 6 25 1013 FBgn0034451 695.71 73.74666667 112.8533333 0.035934513 0.338998373 0.221526465 8 8 8 0.2 dme-miR-277-3p 7mer-m8 TGCATTT 2R 19494075 19494081 + 2R_19494075_19494081_+ 0.60552409 0.620093297 0.612808694 0.01030198 Rep FBtr0086462 19493874 19494125 2R + 19494052 19494090 3'utr Rep FlyBase G17649.1 ATGTTTAAATGTGAGTGTTTCTGTGCATTTTGCTTTGAT 9 19494081 0.966513053 5 9 88 1 1.041392685 0.272727273 0.111111111 0.272727273 9 0 0 11 2R:19494052-19494090 7 Rep FBtr0086462 19493874 19494125 TGCATTT 7mer-m8 dme-miR-277-3p 2R + 19494053 19494093 3'utr Rep FlyBase G13436.1 TGTTTAAATGTGAGTGTTTCTGTGCATTTTGCTTTGATAAA 5 19494069 0.974675023 5 5 57 1 0.903089987 0.125 0.4 0.625 5 0 0 8 2R:19494053-19494093 7 6 1014 FBgn0026378 268.7033333 16.93666667 25.81 0.022329459 0.354260972 0.232468036 -6 6 0 0.2 dme-bantam-3p 6mer3-8 TGATCT 2R 19494350 19494355 - 2R_19494350_19494355_- 0.610826801 0.763101428 0.686964114 0.107674402 hpo FBtr0331920|FBtr0086500 19493994|19494295 19494681|19494681 2R - 19494323 19494379 3'utr hpo FlyBase G25107.1 GGTTTCTTATATCCTAGCTTTCATTGATCTGTCTTTTAATATAAATAGGTATGCTCG 169 19494355 0.809692525 8 161 2042 0.958549223 1.790050474 0.015544041 0.130177515 0.238341969 169 6 2 185 2R:19494323-19494379 6 hpo FBtr0331920|FBtr0086500 19493994|19494295 19494681|19494681 TGATCT 6mer3-8 dme-bantam-3p 2R - 19494327 19494380 3'utr hpo FlyBase G18987.1 TGGTTTCTTATATCCTAGCTTTCATTGATCTGTCTTTTAATATAAATAGGTATG 85 19494355 0.779552891 12 79 990 0.93495935 1.759667845 0.024390244 0.317647059 0.528455285 85 7 1 115 2R:19494327-19494380 6 125 1015 FBgn0261456 615.7733333 26.58 40.65333333 0.202996774 4.702784048 3.074778616 0 0 0 0.2 dme-miR-8-3p 7mer-m8 CAGTATT 2R 19665393 19665399 - 2R_19665393_19665399_- 0.625701432 0.661190273 0.643445852 0.025094442 hrg FBtr0111010 19665258 19666023 2R - 19665347 19665419 3'utr hrg FlyBase G25135.1 ACTTTTACGTATTCTATAACCAGTATTCCGCCAATGTGGAAACAATCTAACAAAAACATACCTCTAATTTTTT 13 19665394 0.983287683 8 12 92 0.9375 1.176091259 0 0.230769231 0.375 13 1 0 15 2R:19665347-19665419 7 hrg FBtr0111010 19665258 19666023 CAGTATT 7mer-m8 dme-miR-8-3p 2R - 19665337 19665403 3'utr hrg FlyBase G19008.1 TAACCAGTATTCCGCCAATGTGGAAACAATCTAACAAAAACATACCTCTAATTTTTTAAGTTTTAAA 6 19665385 0.95826897 4 6 33 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 2R:19665337-19665403 7 7.5 1016 FBgn0015949 2895.236667 92.73333333 142.2466667 0.002590462 0.080877067 0.052725313 -5 -14 -9.5 0.2 dme-miR-2a-2-5p 6mer3-8 TGATGA 2R 19665677 19665682 - 2R_19665677_19665682_- 0.653073413 0.734604398 0.693838905 0.057651123 hrg FBtr0086484|FBtr0086483|FBtr0111010 19663917|19663917|19665258 19666023|19666023|19666023 2R - 19665634 19665726 3'utr hrg FlyBase G25138.1 AACGGCGGTGGCGGCGGCAGCCACTACAACAAAACGTACTACATTGATGATGATGACGAGGACAACAATCAACCACTTTTGACACCTAACAAC 48 19665683 0.718161014 8 47 240 0.980769231 1.707570176 0.057692308 0.083333333 0.153846154 48 1 0 51 2R:19665634-19665726 6 hrg FBtr0111010|FBtr0086484|FBtr0086483 19665258|19663917|19663917 19666023|19666023|19666023 TGATGA 6mer3-8 dme-miR-2a-2-5p 2R - 19665659 19665702 3'utr hrg FlyBase G19010.1 TACAACAAAACGTACTACATTGATGATGATGACGAGGACAACAA 14 19665683 0.956381414 4 14 69 1 1.397940009 0.08 0.642857143 0.8 14 0 0 25 2R:19665659-19665702 6 28 1017 FBgn0015949 2895.236667 92.73333333 142.2466667 0.009671057 0.30194105 0.196841168 1 1 1 0.2 dme-miR-79-3p 6mer3-8 TAGCTT 2R 19672899 19672904 + 2R_19672899_19672904_+ 0.627670464 0.990474377 0.80907242 0.256541098 isopeptidase-T-3 FBtr0330247|FBtr0086473|FBtr0086474 19672808|19672808|19672808 19673477|19673477|19673175 2R + 19672875 19672918 3'utr isopeptidase-T-3 FlyBase G17657.1 TCACACACCCGAAGTGCATGGCTGTAGCTTGGTCCATTTTGGGG 9 19672893 0.977757846 3 8 58 0.909090909 1 0.272727273 0.222222222 0.363636364 9 1 0 10 2R:19672875-19672918 6 isopeptidase-T-3 FBtr0330247|FBtr0086473|FBtr0086474 19672808|19672808|19672808 19673477|19673477|19673175 TAGCTT 6mer3-8 dme-miR-79-3p 2R + 19672873 19672910 3'utr isopeptidase-T-3 FlyBase G13442.1 AATCACACACCCGAAGTGCATGGCTGTAGCTTGGTCCA 6 19672893 0.962992376 3 6 29 1 1.041392685 0.272727273 0.5 0.727272727 6 0 0 11 2R:19672873-19672910 6 7.5 1018 FBgn0028372 205.4433333 10.11 15.41666667 0.036506417 0.741839763 0.486486486 6 6 6 0.2 dme-miR-12-5p 7mer-A1 ATACTCA 2R 20261272 20261278 + 2R_20261272_20261278_+ 0.823342842 0.823346801 0.823344821 2.83E-06 Hsl FBtr0086270|FBtr0086271|FBtr0086272 20260958|20260958|20260958 20261726|20261726|20261726 2R + 20261240 20261354 3'utr Hsl FlyBase G17690.1 AATTTTATATGACACAGCTTTCTATGTTTTATATACTCACAAACTAAGTATAGGATACGTATGTATGTAGCTTCTAGCATAAGCAAGCCAAGTATGCAAGTATTGGAAGCGTGTA 33 20261267 0.895440853 15 32 291 0.976744186 1.62324929 0.139534884 0.272727273 0.441860465 33 1 0 42 2R:20261240-20261354 7 Hsl FBtr0086272|FBtr0086270|FBtr0086271 20260958|20260958|20260958 20261726|20261726|20261726 ATACTCA 7mer-A1 dme-miR-12-5p 2R + 20261244 20261284 3'utr Hsl FlyBase G13466.2 TTATATGACACAGCTTTCTATGTTTTATATACTCACAAACT 9 20261266 0.635329449 7 8 87 0.928571429 1.113943352 0.071428571 0.444444444 0.642857143 9 1 0 13 2R:20261244-20261284 7 9 1019 FBgn0034491 654.3266667 22.12333333 33.89333333 0.013754598 0.406810306 0.265538946 5 6 5.5 0.2 dme-miR-980-3p 6mer2-7 GCAGCT 2R 20261551 20261556 + 2R_20261551_20261556_+ 0.9989765 0.999942684 0.999459592 0.000683207 Hsl FBtr0086270|FBtr0086271|FBtr0086272 20260958|20260958|20260958 20261726|20261726|20261726 2R + 20261386 20261644 3'utr Hsl FlyBase G17691.1 ACGATTAATGCTCTTGAATGCAGGCACACACTCGCTTAAAGCTCTTTGTTGCAAAACTCCCGACTATGTGCCTCATACGGAACGAGTACTTATACACAGTGAATAGAATAATCGCCCATTATTACCCTTGATTTAGAACTCCCCAATGGTATGTCCAGATTTTCTGCAGCTGCGGAGGCTAACAAACTTCAATGTCGGAGATATGCCAAGGTTTTTTGTCTATCCCACGCCAAGGTGTTTGATAAACCACTACTCTTAA 64 20261549 0.813340494 29 59 388 0.935064935 1.380211242 0.233766234 0.125 0.272727273 64 3 2 72 2R:20261386-20261644 6 Hsl FBtr0086272|FBtr0086270|FBtr0086271 20260958|20260958|20260958 20261726|20261726|20261726 GCAGCT 6mer2-7 dme-miR-980-3p 2R + 20261479 20261573 3'utr Hsl FlyBase G13470.1 ACACAGTGAATAGAATAATCGCCCATTATTACCCTTGATTTAGAACTCCCCAATGGTATGTCCAGATTTTCTGCAGCTGCGGAGGCTAACAAACT 23 20261532 0.977059728 9 22 143 0.967741935 1.477121255 0.258064516 0.260869565 0.451612903 23 1 0 30 2R:20261479-20261573 6 13.5 1020 FBgn0034491 654.3266667 22.12333333 33.89333333 0.020631896 0.610215459 0.398308419 2 19 10.5 0.2 dme-miR-318-3p 7mer-m8 CCCAGTG 2R 20261683 20261689 + 2R_20261683_20261689_+ 0.563585922 0.66185525 0.612720586 0.069486959 Hsl FBtr0086270|FBtr0086271|FBtr0086272 20260958|20260958|20260958 20261726|20261726|20261726 2R + 20261646 20261705 3'utr Hsl FlyBase G17691.2 ATGTATATGTTTGCAATCTCTCTCTCCTTAAACGATACCCAGTGTTATATATGGAATGCG 17 20261670 0.786645961 9 16 150 1 1.255272505 0.111111111 0.058823529 0.111111111 17 0 0 18 2R:20261646-20261705 7 Hsl FBtr0086272|FBtr0086270|FBtr0086271 20260958|20260958|20260958 20261726|20261726|20261726 CCCAGTG 7mer-m8 dme-miR-318-3p 2R + 20261626 20261705 3'utr Hsl FlyBase G13471.1 GATAAACCACTACTCTTAATATGTATATGTTTGCAATCTCTCTCTCCTTAAACGATACCCAGTGTTATATATGGAATGCG 16 20261668 0.990491578 8 13 134 0.85 0.929418926 0.1 0.1875 0.35 16 2 1 17 2R:20261626-20261705 7 6 1021 FBgn0034491 654.3266667 22.12333333 33.89333333 0.009169732 0.271206871 0.177025964 13 15 14 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 20270862 20270867 + 2R_20270862_20270867_+ 0.950054054 0.676481526 0.81326779 0.193445041 CG8908 FBtr0339542|FBtr0339542|FBtr0339542 20270784|20270784|20270784 20270994|20270994|20270994 2R + 20270836 20270881 3'utr CG8908 FlyBase G17697.1 AACCCTTATCGTATCAGCGAAACTATCTGTGAAAGCTTTGCTTCCG 10 20270861 0.983664445 3 9 73 0.818181818 0.954242509 0.181818182 0.1 0.181818182 10 2 0 9 2R:20270836-20270881 6 CG8908 FBtr0339542|FBtr0339542|FBtr0339542 20270784|20270784|20270784 20270994|20270994|20270994 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 20270851 20270875 3'utr CG8908 FlyBase G13478.1 AGCGAAACTATCTGTGAAAGCTTTG 5 20270861 0.873066299 2 4 22 0.666666667 0.602059991 0.5 0.2 0.333333333 5 2 0 4 2R:20270851-20270875 6 7.5 1022 FBgn0034493 153.9366667 3.596666667 5.44 0.048721336 2.085264133 1.378676471 1 1 1 0.2 dme-miR-12-5p 6mer2-7 ATACTC 2R 20270957 20270962 + 2R_20270957_20270962_+ 0.975130511 0.998965106 0.987047809 0.016853607 CG8908 FBtr0339542 20270784 20270994 2R + 20270937 20270975 3'utr CG8908 FlyBase G17698.1 AATCATCAGTCGCCAAATTGATACTCTTATATGTAAATC 17 20270955 0.838425112 2 16 148 0.944444444 1.230448921 0 0.058823529 0.111111111 17 1 0 17 2R:20270937-20270975 6 CG8908 FBtr0339542 20270784 20270994 ATACTC 6mer2-7 dme-miR-12-5p 2R + 20270944 20270974 3'utr CG8908 FlyBase G13479.1 AGTCGCCAAATTGATACTCTTATATGTAAAT 14 20270955 0.707905213 4 13 100 0.913043478 1.322219295 0.043478261 0.357142857 0.608695652 14 2 0 21 2R:20270944-20270974 6 15.5 1023 FBgn0034493 153.9366667 3.596666667 5.44 0.10069076 4.309545876 2.849264706 2 2 2 0.2 dme-miR-12-5p 6mer2-7 ATACTC 2R 20271762 20271767 - 2R_20271762_20271767_- 0.94860226 0.693962543 0.821282401 0.180057529 CG10444 FBtr0086305 20271651 20272417 2R - 20271751 20272207 3'utr CG10444 FlyBase G25199.1 TTATTAGTCGTGTTGCAAATGTTCACAAGCGCATCATTAAGAGGCCTCTTAAGAATAGTCAAATGTTTTTTACAAGAACGTATCAAAAGTAGGAGTCTACCTCAATGAACTTTTACAGAGGGACAATAATCAATTTGGAGCCTAAAAGCGAGTTGGCCGACTACTTTCCCATGTTGAGCATTGGCAGCCACAATGCCCCACATAAATTATTGATTTAGTAGTACATCTAATTTTAATGGGATATTTATATTCATACCTCTTAGTTACTCGATATTTGCATACATAGATAACATAATAACATTACAATAATACACTACAGTGAGCACCGCCTATAAATAGTTACTACATGGCTCTTAAAGCATTACATTGCGCCACAGTGTGAATTCTGTTTACTTATATACCTCTACTATATGTACACAAATATACTATAGACTAATTATATACTCGTGTCGTGTCG 76 20271779 0.984333272 42 70 552 0.921348315 1.612783857 0.134831461 0.171052632 0.292134831 76 6 1 82 2R:20271751-20272207 6 CG10444 FBtr0086305 20271651 20272417 ATACTC 6mer2-7 dme-miR-12-5p 2R - 20271735 20271889 3'utr CG10444 FlyBase G19056.1 GTGAGCACCGCCTATAAATAGTTACTACATGGCTCTTAAAGCATTACATTGCGCCACAGTGTGAATTCTGTTTACTTATATACCTCTACTATATGTACACAAATATACTATAGACTAATTATATACTCGTGTCGTGTCGCAATCAACCATTGAAC 21 20271779 0.979099797 13 20 144 0.9 1.431363764 0.1 0.380952381 0.566666667 21 3 0 27 2R:20271735-20271889 6 5.5 1024 FBgn0034494 948.11 41.53333333 63.96 0.005801015 0.132423756 0.085991245 12 12 12 0.2 dme-miR-252-5p 7mer-m8 GTACTTA 2R 20281767 20281773 - 2R_20281767_20281773_- 0.435614211 0.531335815 0.483475013 0.067685392 CG16868 FBtr0086302 20281627 20282149 2R - 20281714 20281800 3'utr CG16868 FlyBase G25216.1 TATTTGATAAGCACCAACAACAGAAATGTACTTACTTGTCTGATTGTAAGATACCATGTCGTATATCGTTTTTTGTAATAGCCCCTA 76 20281774 0.980514084 9 75 469 1 1.991226076 0.020408163 0.236842105 0.408163265 76 0 0 98 2R:20281714-20281800 7 CG16868 FBtr0086302 20281627 20282149 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 20281738 20281797 3'utr CG16868 FlyBase G19068.1 TTGATAAGCACCAACAACAGAAATGTACTTACTTGTCTGATTGTAAGATACCATGTCGTA 58 20281774 0.978303672 5 55 372 0.95 1.880813592 0.0125 0.25862069 0.4625 58 4 0 76 2R:20281738-20281797 7 63 1025 FBgn0034498 322.4366667 7.546666667 11.61333333 0.195387208 8.348056537 5.424799082 1 1 1 0.2 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 2R 20324528 20324533 + 2R_20324528_20324533_+ 0.919357614 0.999980375 0.959668994 0.057008929 CG8920 FBtr0086281|FBtr0301207 20324518|20324518 20324717|20324717 2R + 20324504 20324539 stop_codon CG8920 FlyBase G17711.1 AAACAACGACATCTGAATTGTGACTGGTGCCCTATA 59 20324522 0.612507206 6 58 386 0.987654321 1.903089987 0.12345679 0.322033898 0.50617284 59 1 0 80 2R:20324504-20324539 6 CG8920 FBtr0086281|FBtr0301207 20324518|20324518 20324717|20324717 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 2R + 20324504 20324549 stop_codon CG8920 FlyBase G13490.1 AAACAACGACATCTGAATTGTGACTGGTGCCCTATAAGTTTATATT 22 20324523 0.948628914 4 21 146 0.975 1.591064607 0.075 0.5 0.725 22 1 0 39 2R:20324504-20324549 6 40.5 1026 FBgn0027529 763.31 27.44 42.03333333 0.05305839 1.475947522 0.963521015 6 5 5.5 0.2 dme-miR-283-5p 6mer3-8 TGATAT 2R 20324615 20324620 + 2R_20324615_20324620_+ 0.597802718 0.550415521 0.574109119 0.03350781 CG8920 FBtr0086281|FBtr0301207 20324518|20324518 20324717|20324717 2R + 20324598 20324635 3'utr CG8920 FlyBase G17712.1 ATAAACCGGAACTGACTTGATATGTTATTGCTAACACA 8 20324615 0.735816155 3 8 52 1 0.954242509 0.222222222 0.125 0.222222222 8 0 0 9 2R:20324598-20324635 6 CG8920 FBtr0086281|FBtr0301207 20324518|20324518 20324717|20324717 TGATAT 6mer3-8 dme-miR-283-5p 2R + 20324584 20324620 3'utr CG8920 FlyBase G13491.1 CTATAAGTGCTTCAATAAACCGGAACTGACTTGATAT 5 20324599 0.931782444 3 5 24 1 0.698970004 0 0 0 5 0 0 5 2R:20324584-20324620 6 6 1027 FBgn0027529 763.31 27.44 42.03333333 0.007860502 0.218658892 0.142743854 0 16 8 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 2R 20559469 20559475 - 2R_20559469_20559475_- 0.520343968 0.520986809 0.520665389 0.000454528 Mgat1 FBtr0086259 20559154 20560039 2R - 20559451 20559566 3'utr Mgat1 FlyBase G25232.2 TAGCAATGGTTAAGTTATAGTATGCAGCGTGTAATTTGTAGCATTTAAGTTGATCCAACTAGAGTTCTAACGGCAACGGACGTGTAATATTTGTGATTTTTGATTATTTAATTTAC 172 20559477 0.985210997 18 162 1872 0.95631068 1.817344971 0.427184466 0.162790698 0.300970874 172 7 2 197 2R:20559451-20559566 7 Mgat1 FBtr0086259 20559154 20560039 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 20559451 20559534 3'utr Mgat1 FlyBase G19081.1 AATTTGTAGCATTTAAGTTGATCCAACTAGAGTTCTAACGGCAACGGACGTGTAATATTTGTGATTTTTGATTATTTAATTTAC 118 20559477 0.975422873 14 111 1290 0.948571429 1.742986833 0.394285714 0.389830508 0.588571429 118 7 2 166 2R:20559451-20559534 7 129.5 1028 FBgn0034521 428.4 18.24333333 27.83333333 0.302287582 7.098483464 4.652694611 2 2 2 0.2 dme-miR-14-3p 8mer-A1 AAGACTGA 2R 20620888 20620895 + 2R_20620888_20620895_+ 0.638372086 0.641522127 0.639947106 0.002227386 CG9945 FBtr0086226|FBtr0086225 20620747|20620747 20620997|20621081 2R + 20620842 20620914 3'utr CG9945 FlyBase G17751.1 ATATTCACCACAGTCGGGCCGGCTGGGATAATTGGTTCTATTAAATAAGACTGAAGAATATGTCACTCACTTG 88 20620887 0.785108672 15 84 616 0.94 1.973127854 0.17 0.125 0.23 88 6 0 94 2R:20620842-20620914 8 CG9945 FBtr0086225 20620747 20621081 AAGACTGA 8mer-A1 dme-miR-14-3p 2R + 20620814 20620907 3'utr CG9945 FlyBase G13517.1 TAGTGGCTTGCCTAAGCGACGCACGAGAATATTCACCACAGTCGGGCCGGCTGGGATAATTGGTTCTATTAAATAAGACTGAAGAATATGTCAC 40 20620886 0.985662323 10 34 282 0.8125 1.414973348 0.140625 0.375 0.609375 40 11 1 52 2R:20620814-20620907 8 42.5 1029 FBgn0034527 339.9533333 21.37333333 32.82 0.125017159 1.988459139 1.294942108 1 2 1.5 0.2 dme-miR-932-5p 8mer-A1 GGAATTGA 2R 20634028 20634035 - 2R_20634028_20634035_- 0.674824565 0.674974936 0.67489975 0.000106278 rig FBtr0086252 20633874 20634190 2R - 20634009 20634053 3'utr rig FlyBase G25265.1 AATAGCCAGAAACTGTGTGGAATTGAAACCGATTTGAGTCGCCTT 11 20634037 0.895031137 4 8 48 0.923076923 1.079181246 0.307692308 0.181818182 0.307692308 11 1 0 12 2R:20634009-20634053 8 rig FBtr0086252 20633874 20634190 GGAATTGA 8mer-A1 dme-miR-932-5p 2R - 20634009 20634052 3'utr rig FlyBase G19107.1 ATAGCCAGAAACTGTGTGGAATTGAAACCGATTTGAGTCGCCTT 10 20634036 0.767282895 6 10 44 1 1.113943352 0 0.3 0.461538462 10 0 0 13 2R:20634009-20634052 8 9 1030 FBgn0250850 1237.703333 36.17666667 55.41333333 0.007271532 0.248779139 0.162415784 2 1 1.5 0.2 dme-miR-307a-3p 6mer2-7 GTTGTG 2R 20642498 20642503 + 2R_20642498_20642503_+ 0.647499797 0.943097809 0.795298803 0.20901935 CG11110 FBtr0086231 20642416 20642558 2R + 20642456 20642539 3'utr CG11110 FlyBase G17760.1 CCAATTGTGTACATACTGAACCGTATATTTTATAAACAATTTGTTGTGTTCCCGCATGCAAAGCAAAGTAGGATGTTCCAAAGT 9 20642499 0.969251538 9 9 53 1 1.079181246 0.083333333 0.333333333 0.5 9 0 0 12 2R:20642456-20642539 6 CG11110 FBtr0086231 20642416 20642558 GTTGTG 6mer2-7 dme-miR-307a-3p 2R + 20642477 20642539 3'utr CG11110 FlyBase G13523.1 CGTATATTTTATAAACAATTTGTTGTGTTCCCGCATGCAAAGCAAAGTAGGATGTTCCAAAGT 16 20642499 0.663061903 5 14 116 0.80952381 0.929418926 0.095238095 0.25 0.428571429 16 3 1 17 2R:20642477-20642539 6 8 1031 FBgn0034535 57.65333333 9.79 14.88666667 0.138760407 0.817160368 0.537393641 -1 -1 -1 0.2 dme-miR-1006-3p 8mer-A1 CGAATTTA 2R 20662805 20662812 - 2R_20662805_20662812_- 0.428091298 0.67164753 0.549869414 0.172220241 Fem-1 FBtr0086246|FBtr0086245 20662472|20662472 20662931|20662931 2R - 20662780 20662856 3'utr Fem-1 FlyBase G25283.1 TATCCATATGTAGAAGCTTTGGTGTCTGTATGTGCGATATGTTTCGAATTTAGCGACTTAACTTAGCCAAAAGAATG 25 20662826 0.978446338 12 24 234 0.966666667 1.462397998 0.2 0.16 0.3 25 1 0 29 2R:20662780-20662856 8 Fem-1 FBtr0086245|FBtr0086246 20662472|20662472 20662931|20662931 CGAATTTA 8mer-A1 dme-miR-1006-3p 2R - 20662774 20662858 3'utr Fem-1 FlyBase G19120.1 TATATCCATATGTAGAAGCTTTGGTGTCTGTATGTGCGATATGTTTCGAATTTAGCGACTTAACTTAGCCAAAAGAATGCAAAGG 16 20662794 0.987184944 8 13 119 0.904761905 0.977723605 0.19047619 0.3125 0.476190476 16 1 1 19 2R:20662774-20662858 8 10 1032 FBgn0034542 388.61 17.94666667 27.52666667 0.02573274 0.557206538 0.363284088 14 -18 -2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 20662888 20662893 - 2R_20662888_20662893_- 0.999975461 0.999799458 0.99988746 0.000124451 Fem-1 FBtr0086246|FBtr0086246|FBtr0086246|FBtr0086245|FBtr0086245|FBtr0086245 20662472|20662472|20662472|20662472|20662472|20662472 20662931|20662931|20662931|20662931|20662931|20662931 2R - 20662868 20662946 stop_codon Fem-1 FlyBase G25284.1 AAGGTGCTGCCGTAGATAGTCAATGGCTTGAGCCGCAACTGAAGTAATTAGAACTGTGAATACAATAAGCCACGTTGGA 42 20662886 0.926851832 10 38 223 0.9 1.352182518 0.14 0.166666667 0.3 42 4 1 45 2R:20662868-20662946 6 Fem-1 FBtr0086245|FBtr0086245|FBtr0086245|FBtr0086246|FBtr0086246|FBtr0086246 20662472|20662472|20662472|20662472|20662472|20662472 20662931|20662931|20662931|20662931|20662931|20662931 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 20662875 20662942 stop_codon Fem-1 FlyBase G19121.1 TGCTGCCGTAGATAGTCAATGGCTTGAGCCGCAACTGAAGTAATTAGAACTGTGAATACAATAAGCCA 28 20662899 0.789405457 10 24 144 0.825 1.041392685 0.275 0.321428571 0.525 28 5 2 33 2R:20662875-20662942 6 27.5 1033 FBgn0034542 388.61 17.94666667 27.52666667 0.070765034 1.532317979 0.999031242 -7 6 -0.5 0.2 dme-miR-2b-2-5p 6mer2-7 TGAAGA 2R 20827604 20827609 - 2R_20827604_20827609_- 0.994527729 0.848555024 0.921541377 0.103218286 sktl FBtr0071563 20827280 20827991 2R - 20827599 20827647 5'utr sktl FlyBase G25309.1 TTCTACTTGGTTGGAATTTGTTAGCGTGTTGCCTTAGCTGAAGATTTTG 15 20827614 0.686285335 7 14 122 0.944444444 0.929418926 0.166666667 0.133333333 0.277777778 15 0 1 17 2R:20827599-20827647 6 sktl FBtr0071563 20827280 20827991 TGAAGA 6mer2-7 dme-miR-2b-2-5p 2R - 20827553 20827628 5'utr sktl FlyBase G19138.1 GTTAGCGTGTTGCCTTAGCTGAAGATTTTGTTTTAATTTTTGAAATTATTGTGCTCGACAAGCGATGGGCTCAATC 8 20827614 0.979389517 5 7 54 1 1.146128036 0.357142857 0.375 0.642857143 8 0 0 14 2R:20827553-20827628 6 8 1034 FBgn0016984 2187.616667 79.33666667 122.04 0.003656948 0.100836099 0.065552278 5 5 5 0.2 dme-miR-34-5p 7mer-A1 ACTGCCA 2R 20827762 20827768 - 2R_20827762_20827768_- 0.820359149 0.82174973 0.821054439 0.000983303 sktl FBtr0071563 20827280 20827991 2R - 20827755 20827789 5'utr sktl FlyBase G25311.1 ATGTGGCGCCCGTGCTAATTGACTGCCAACTAGAC 12 20827771 0.738087096 2 12 68 1 1.079181246 0.416666667 0 0 12 0 0 12 2R:20827755-20827789 7 sktl FBtr0071563 20827280 20827991 ACTGCCA 7mer-A1 dme-miR-34-5p 2R - 20827748 20827796 5'utr sktl FlyBase G19139.1 GAAATTTATGTGGCGCCCGTGCTAATTGACTGCCAACTAGACACGCTAC 11 20827770 0.842636229 3 9 60 0.882352941 0.698970004 0.176470588 0.454545455 0.647058824 11 0 2 15 2R:20827748-20827796 7 11 1035 FBgn0016984 2187.616667 79.33666667 122.04 0.005028303 0.138649637 0.090134382 3 2 2.5 0.2 dme-miR-970-3p 7mer-m8 TCTTATG 2R 21006788 21006794 + 2R_21006788_21006794_+ 0.6105823 0.632087883 0.621335091 0.015206756 CG10543 FBtr0071524|FBtr0332594 21006244|21006244 21007740|21007740 2R + 21006709 21006809 3'utr CG10543 FlyBase G17812.1 ATATGAAGCATATATATTAGGCTAAGCAACTATACAATAATGGCAGACAGACCACAACCACAAGCAACTTTCGAACAAATCTTATGCTTATTTAACATTTA 32 21006790 0.981538828 10 31 244 0.973684211 1.568201724 0.052631579 0.125 0.263157895 32 1 0 37 2R:21006709-21006809 7 CG10543 FBtr0332594|FBtr0071524 21006244|21006244 21007740|21007740 TCTTATG 7mer-m8 dme-miR-970-3p 2R + 21006764 21006833 3'utr CG10543 FlyBase G13554.1 AACCACAAGCAACTTTCGAACAAATCTTATGCTTATTTAACATTTACCATACGAGTTATGAACGCAACGC 11 21006790 0.984034172 6 11 90 1 1.322219295 0 0.636363636 0.80952381 11 0 0 21 2R:21006764-21006833 7 16 1036 FBgn0034570 1491.83 26.02 40.1 0.010725083 0.614911606 0.399002494 -2 -2 -2 0.2 dme-miR-14-3p 6mer3-8 AAGACT 2R 21059772 21059777 + 2R_21059772_21059777_+ 0.803568319 0.508692207 0.656130263 0.20850889 cpa FBtr0071532 21059060 21059883 2R + 21059695 21059793 3'utr cpa FlyBase G17836.1 CCTAGTATGAGCATGAATAATAACTATGCTAAACCACTGATCATTTTTGCCAGCTCTCCATTGACAAACAATAACTAAAGACTTTGATTTTATAAAAAC 83 21059779 0.982072357 10 83 616 1 1.982271233 0.020833333 0.144578313 0.260416667 83 0 0 96 2R:21059695-21059793 6 cpa FBtr0071532 21059060 21059883 AAGACT 6mer3-8 dme-miR-14-3p 2R + 21059729 21059794 3'utr cpa FlyBase G13571.1 CACTGATCATTTTTGCCAGCTCTCCATTGACAAACAATAACTAAAGACTTTGATTTTATAAAAACA 58 21059779 0.982576389 5 58 437 1 1.934498451 0.023255814 0.327586207 0.546511628 58 0 0 86 2R:21059729-21059794 6 65.5 1037 FBgn0034577 1983.766667 126.3666667 193.9 0.033017996 0.518332894 0.337802991 -7 -7 -7 0.2 dme-miR-8-3p 8mer-A1 CAGTATTA 2R 21088057 21088064 + 2R_21088057_21088064_+ 0.627904937 0.633746321 0.630825629 0.004130494 Treh FBtr0071540|FBtr0071538|FBtr0071539|FBtr0071536|FBtr0332423|FBtr0071537 21086953|21086953|21086953|21086953|21086953|21086953 21088226|21088226|21088226|21088226|21088226|21088226 2R + 21087963 21088129 3'utr Treh FlyBase G17844.1 ATTGCTACTCAAGTAGTGTGATTCCCCCCTCCGTGTTTGTGCGTGTGTTGTGAAGTCTGTAGTTGCTAACGTTTTTCGTTGAGTGCGGAGATTGCAGTATTAGTTTATCATTATTTGGTAGTTGAAGTGAGAGTTGTATATACTGAATTTATATGGGCATGCCCGAA 232 21088054 0.898140458 22 228 2040 0.985714286 2.139879086 0.05 0.168103448 0.310714286 232 3 1 276 2R:21087963-21088129 8 Treh FBtr0071536|FBtr0332423|FBtr0071537|FBtr0071540|FBtr0071538|FBtr0071539 21086953|21086953|21086953|21086953|21086953|21086953 21088226|21088226|21088226|21088226|21088226|21088226 CAGTATTA 8mer-A1 dme-miR-8-3p 2R + 21088009 21088138 3'utr Treh FlyBase G13577.1 GTTGTGAAGTCTGTAGTTGCTAACGTTTTTCGTTGAGTGCGGAGATTGCAGTATTAGTTTATCATTATTTGGTAGTTGAAGTGAGAGTTGTATATACTGAATTTATATGGGCATGCCCGAAATTGTTATT 186 21088054 0.900389723 20 181 1678 0.97689769 2.170261715 0.02970297 0.440860215 0.656765677 186 6 1 296 2R:21088009-21088138 8 151.5 1038 FBgn0003748 466.8133333 20.13666667 30.89333333 0.324540859 7.52358881 4.903970652 3 3 3 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 21123786 21123793 - 2R_21123786_21123793_- 0.570971453 0.620901367 0.59593641 0.035305771 CG4050 FBtr0071637|FBtr0071638 21123733|21123733 21124117|21124117 2R - 21123782 21123824 3'utr CG4050 FlyBase G25374.2 ACGTAATTTATATATGAAGGCCTGACGGTCTTGCATTTATTTA 8 21123794 0.968906009 3 6 64 0.75 0.77815125 0.125 0 0 8 2 0 6 2R:21123782-21123824 8 CG4050 FBtr0071637|FBtr0071638 21123733|21123733 21124117|21124117 TGCATTTA 8mer-A1 dme-miR-277-3p 2R - 21123755 21123808 3'utr CG4050 FlyBase G19189.1 AAGGCCTGACGGTCTTGCATTTATTTAAATAACGTTAGGACGTGTACTAAAATA 7 21123794 0.987773602 4 7 62 1 1 0.3 0.428571429 0.6 7 0 0 10 2R:21123755-21123808 8 6 1039 FBgn0020312 364 12.77333333 19.31 0.016483516 0.469728601 0.310719834 1 1 1 0.2 dme-miR-252-5p 7mer-m8 GTACTTA 2R 21123956 21123962 - 2R_21123956_21123962_- 0.588268526 0.588299757 0.588284141 2.21E-05 CG4050 FBtr0071637|FBtr0071638 21123733|21123733 21124117|21124117 2R - 21123896 21124048 3'utr CG4050 FlyBase G25375.1 AAGGTTCCCACATTCTGTGAGACATACGGAGTCTGATAAAAATAACACAAAGTGAAGATATGTGGTCCATTCCACACAATTCCGTTGTACTTATTAGTTATTAACGTAATTCTTTGATCATATACTCGTTTTGAAGATATTTATACAATTTTT 144 21123963 0.758965847 33 134 1291 0.934911243 1.596597096 0.142011834 0.166666667 0.289940828 144 8 3 158 2R:21123896-21124048 7 CG4050 FBtr0071637|FBtr0071638 21123733|21123733 21124117|21124117 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 21123903 21124046 3'utr CG4050 FlyBase G19190.1 GGTTCCCACATTCTGTGAGACATACGGAGTCTGATAAAAATAACACAAAGTGAAGATATGTGGTCCATTCCACACAATTCCGTTGTACTTATTAGTTATTAACGTAATTCTTTGATCATATACTCGTTTTGAAGATATTTATAC 95 21123963 0.772790172 26 90 783 0.957142857 1.826074803 0.221428571 0.347368421 0.557142857 95 5 1 134 2R:21123903-21124046 7 57 1040 FBgn0020312 364 12.77333333 19.31 0.156593407 4.462421712 2.951838426 1 1 1 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 21129646 21129653 - 2R_21129646_21129653_- 0.499829941 0.499923763 0.499876852 6.64E-05 Magi FBtr0071636|FBtr0342874|FBtr0342873 21129461|21129461|21129461 21129874|21129874|21129874 2R - 21129550 21129695 3'utr Magi FlyBase G25389.1 TTCTTAAGATACCGATCATTATCTTAGGCTAAGTTACTGCTTGTACTTAAACGTTAAGACAATTTGCCAGTTTGTGAGATATTAATCACTTAGCTTAAGCTGTTTTAGACATATACGAATTGTACAAATGTAAAGGACTTTAAATT 98 21129654 0.797334114 26 89 797 0.925 1.443262987 0.066666667 0.183673469 0.333333333 98 6 3 111 2R:21129550-21129695 8 Magi FBtr0071636|FBtr0342874|FBtr0342873 21129461|21129461|21129461 21129874|21129874|21129874 GTACTTAA 8mer-A1 dme-miR-252-5p 2R - 21129526 21129690 3'utr Magi FlyBase G19200.1 AAGATACCGATCATTATCTTAGGCTAAGTTACTGCTTGTACTTAAACGTTAAGACAATTTGCCAGTTTGTGAGATATTAATCACTTAGCTTAAGCTGTTTTAGACATATACGAATTGTACAAATGTAAAGGACTTTAAATTTTTATCTCGAGTATGTATATTATT 92 21129654 0.988612359 24 84 787 0.923076923 1.51851394 0.13986014 0.391304348 0.608391608 92 8 3 132 2R:21129526-21129690 8 43.5 1041 FBgn0034590 938.3433333 22.88 35.01 0.046358298 1.901223776 1.242502142 1 1 1 0.2 dme-miR-14-3p 8mer-A1 AAGACTGA 2R 21129768 21129775 - 2R_21129768_21129775_- 0.35137475 0.422196376 0.386785563 0.050078434 Magi FBtr0071636|FBtr0342874|FBtr0342873 21129461|21129461|21129461 21129874|21129874|21129874 2R - 21129725 21129892 stop_codon Magi FlyBase G25390.1 CAGCAGCCACAATTATGACTCTGAGACCTACGCATTCGGCTCTATAAGAGCTTTCTATAGTGTTGCATCGCCTGCAGGCCCTTAGTTTGTACTTTCGTTAGCAAAGTACTCACCCCAAAGACTGAATTTAGTAGCATATGTAAGCCAAACCCTTTGCAAGTCTCAAAA 125 21129766 0.974034658 20 115 711 0.923611111 1.822821645 0.118055556 0.128 0.243055556 125 10 1 133 2R:21129725-21129892 8 Magi FBtr0071636|FBtr0342874|FBtr0342873 21129461|21129461|21129461 21129874|21129874|21129874 AAGACTGA 8mer-A1 dme-miR-14-3p 2R - 21129725 21129838 3'utr Magi FlyBase G19201.1 CTATAGTGTTGCATCGCCTGCAGGCCCTTAGTTTGTACTTTCGTTAGCAAAGTACTCACCCCAAAGACTGAATTTAGTAGCATATGTAAGCCAAACCCTTTGCAAGTCTCAAAA 89 21129765 0.972189483 20 81 505 0.902255639 2.079181246 0.082706767 0.348314607 0.563909774 89 13 0 120 2R:21129725-21129838 8 75 1042 FBgn0034590 938.3433333 22.88 35.01 0.0799281 3.277972028 2.142245073 -9 -10 -9.5 0.2 dme-bantam-3p 6mer3-8 TGATCT 2R 21145453 21145458 + 2R_21145453_21145458_+ 0.991741622 0.994822295 0.993281958 0.002178384 Xbp1 FBtr0310044 21144863 21145750 2R + 21145285 21145523 stop_codon Xbp1 FlyBase G17860.1 AGGCGATCTCCCCGTTGGCCAAATCCCCCGCATTGTCTCTACACTCGGCCACCTCGGACCATGGATACGAGTCCATACTGGGCTCTCCCACATCCGTGGCTCTCACTCTGCCCGCAGATGAGGACGATTTCCCCTGGGAGAGCAACTTTGACGAGCTGTTTCCCAGTTTGATCTGAGTTTTTCAAGCTGAAAACTTCGTTCTGTCTCTCTTTTATTGTTAAGTTTGGCCGGCCGCCGTT 201 21145452 0.90449879 44 195 1596 0.976284585 1.790636962 0.134387352 0.208955224 0.371541502 201 3 3 247 2R:21145285-21145523 6 Xbp1 FBtr0310044 21144863 21145750 TGATCT 6mer3-8 dme-bantam-3p 2R + 21145374 21145473 stop_codon Xbp1 FlyBase G13597.1 ACATCCGTGGCTCTCACTCTGCCCGCAGATGAGGACGATTTCCCCTGGGAGAGCAACTTTGACGAGCTGTTTCCCAGTTTGATCTGAGTTTTTCAAGCTG 79 21145452 0.858162389 16 66 450 0.956896552 1.744292983 0.224137931 0.358974359 0.568965517 78 4 1 111 2R:21145374-21145473 6 44.5 1043 FBgn0021872 6665.376667 377.2933333 573.4833333 0.006676292 0.117945365 0.077595978 1 1 1 0.2 dme-miR-1012-3p 8mer-A1 TTGACTAA 2R 21145710 21145717 + 2R_21145710_21145717_+ 0.599443415 0.601912084 0.60067775 0.001745635 Xbp1 FBtr0310044|FBtr0310045 21144863|21145459 21145750|21145750 2R + 21145608 21145741 3'utr Xbp1 FlyBase G17861.2 TAGCTGTAGGTTTCCATTTATATTTAACAATCTCTAACCACATAGGCTTATGATTACTCTTATATGTATGTATTGTGCTCAAAGAATTTGAAAAAAAAACATTTGACTAAAAAATATTCAAAATATAAACCAAA 429 21145709 0.846178406 28 409 2740 0.960784314 2.088136089 0.145098039 0.153846154 0.288235294 429 17 3 490 2R:21145608-21145741 8 Xbp1 FBtr0310044|FBtr0310045 21144863|21145459 21145750|21145750 TTGACTAA 8mer-A1 dme-miR-1012-3p 2R + 21145623 21145748 3'utr Xbp1 FlyBase G13598.2 ATTTATATTTAACAATCTCTAACCACATAGGCTTATGATTACTCTTATATGTATGTATTGTGCTCAAAGAATTTGAAAAAAAAACATTTGACTAAAAAATATTCAAAATATAAACCAAACCAAACA 254 21145709 0.967857902 28 241 1539 0.96 1.681241237 0.105714286 0.279527559 0.477142857 254 8 6 336 2R:21145623-21145748 8 183 1044 FBgn0021872 6665.376667 377.2933333 573.4833333 0.027455313 0.485033749 0.31910256 1 1 1 0.2 dme-miR-276a-3p 7mer-A1 GTTCCTA 2R 21148379 21148385 - 2R_21148379_21148385_- 0.715695843 0.758100489 0.736898166 0.029984651 CG30389 FBtr0310423 21148263 21149340 2R - 21148373 21148404 3'utr CG30389 FlyBase G25405.1 ATTTTTGTTTAGTTCTGCTGTTCCTAAGAAAC 13 21148386 0.740578779 3 13 115 1 1.113943352 0.230769231 0 0 13 0 0 13 2R:21148373-21148404 7 CG30389 FBtr0310423 21148263 21149340 GTTCCTA 7mer-A1 dme-miR-276a-3p 2R - 21148368 21148400 3'utr CG30389 FlyBase G19216.1 TTGTTTAGTTCTGCTGTTCCTAAGAAACAAAAA 11 21148386 0.962646018 2 8 75 0.588235294 0.698970004 0 0.363636364 0.588235294 11 6 1 10 2R:21148368-21148400 7 12 1045 FBgn0050389 2516.626667 66.38 102.5 0.004768288 0.180777343 0.117073171 1 1 1 0.2 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2R 21148537 21148542 - 2R_21148537_21148542_- 0.999531295 0.999999998 0.999765646 0.000331421 CG30389 FBtr0310423 21148263 21149340 2R - 21148461 21148587 3'utr CG30389 FlyBase G25406.1 TTTGCACGACCTCTGCCTCTTGCCCAACGATTCAATGGAATATTTTTGAAGTCTGCGCCCTTGATTTATTATCTCATTAAATTATTTTTGTTATAAAACCTTAAATGTATGCTATAATTTAGAACCT 52 21148521 0.824957765 14 45 466 0.867647059 1.293730757 0.25 0.269230769 0.441176471 52 7 2 59 2R:21148461-21148587 6 CG30389 FBtr0310423 21148263 21149340 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2R - 21148498 21148581 3'utr CG30389 FlyBase G19217.1 CGACCTCTGCCTCTTGCCCAACGATTCAATGGAATATTTTTGAAGTCTGCGCCCTTGATTTATTATCTCATTAAATTATTTTTG 33 21148535 0.801786664 18 32 303 0.98 1.69019608 0.22 0.393939394 0.6 33 1 0 49 2R:21148498-21148581 6 23 1046 FBgn0050389 2516.626667 66.38 102.5 0.009139218 0.346489907 0.224390244 -21 -7 -14 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 21148649 21148654 - 2R_21148649_21148654_- 0.962327834 0.622396996 0.792362415 0.240367374 CG30389 FBtr0310423 21148263 21149340 2R - 21148613 21148705 3'utr CG30389 FlyBase G25407.1 AAGCCAAGGAAGTACCCCCCAAAATCCTATGTAAAATGTTTTCTATTTTTTACCAAACGCTGTGACAGAGTTGGACCAACCGAAGTGATGGCC 22 21148656 0.999947989 9 20 133 0.916666667 1.342422681 0 0.090909091 0.166666667 22 2 0 22 2R:21148613-21148705 6 CG30389 FBtr0310423 21148263 21149340 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 21148599 21148661 3'utr CG30389 FlyBase G19218.1 ATTTTTTACCAAACGCTGTGACAGAGTTGGACCAACCGAAGTGATGGCCATGATCTTGGGGAG 15 21148656 0.97120576 7 13 74 0.869565217 1.301029996 0 0.533333333 0.695652174 15 3 0 20 2R:21148599-21148661 6 13 1047 FBgn0050389 2516.626667 66.38 102.5 0.005165645 0.195842121 0.126829268 2 2 2 0.2 dme-miR-304-5p 8mer-A1 TGAGATTA 2R 21149249 21149256 - 2R_21149249_21149256_- 0.624378327 0.624693511 0.624535919 0.00022288 CG30389 FBtr0310423|FBtr0071632|FBtr0071633|FBtr0330235 21148263|21148731|21148731|21148731 21149340|21149340|21149340|21149340 2R - 21149238 21149283 stop_codon CG30389 FlyBase G25409.1 TCGCACATGCATCTGCGACGACAAGTTTGAGATTATTATACTTTAT 65 21149257 0.780796593 3 63 489 0.958333333 1.537819095 0.347222222 0.107692308 0.194444444 65 2 1 69 2R:21149238-21149283 8 CG30389 FBtr0310423|FBtr0330235|FBtr0071633|FBtr0071632 21148263|21148731|21148731|21148731 21149340|21149340|21149340|21149340 TGAGATTA 8mer-A1 dme-miR-304-5p 2R - 21149238 21149284 stop_codon CG30389 FlyBase G19221.1 CTCGCACATGCATCTGCGACGACAAGTTTGAGATTATTATACTTTAT 34 21149257 0.769324624 4 33 253 0.981132075 1.716003344 0.471698113 0.411764706 0.622641509 34 1 0 52 2R:21149238-21149284 8 49.5 1048 FBgn0050389 2516.626667 66.38 102.5 0.019669187 0.745706538 0.482926829 1 1 1 0.2 dme-miR-304-5p 8mer-A1 TGAGATTA 2R 21162115 21162122 - 2R_21162115_21162122_- 0.600438956 0.605975581 0.603207268 0.003914967 CG4266 FBtr0342871|FBtr0113100|FBtr0310422|FBtr0071629 21161711|21161711|21161711|21161711 21162255|21162255|21164953|21162255 2R - 21162065 21162160 3'utr CG4266 FlyBase G25426.1 GTAACTCCATACATGCGAACATTTTACCGTTTTTAAATTGAGATTACGTAGCATTTTTGACGAGGGGGGTGGGGGTTGAACCGGACGCTTTTAAAA 23 21162123 0.986398093 6 22 182 0.961538462 1.397940009 0.192307692 0.130434783 0.230769231 23 1 0 25 2R:21162065-21162160 8 CG4266 FBtr0310422|FBtr0071629|FBtr0342871|FBtr0113100 21161711|21161711|21161711|21161711 21164953|21162255|21162255|21162255 TGAGATTA 8mer-A1 dme-miR-304-5p 2R - 21162106 21162140 3'utr CG4266 FlyBase G19232.1 ATTTTACCGTTTTTAAATTGAGATTACGTAGCATT 6 21162123 0.819123942 2 6 61 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 2R:21162106-21162140 8 10.5 1049 FBgn0034598 911.3333333 25.02 38.24333333 0.01152158 0.419664269 0.274557657 1 1 1 0.2 dme-miR-277-3p 6mer3-8 TGCATT 2R 21169989 21169994 - 2R_21169989_21169994_- 0.563663931 0.628435292 0.596049611 0.045800296 LSm1 FBtr0071628 21169967 21170064 2R - 21169976 21170009 3'utr LSm1 FlyBase G25437.1 TTTGTATATTTGTACTGCATTAAAAAACTATGTT 22 21169999 0.68222221 5 22 204 1 1.431363764 0 0.227272727 0.37037037 22 0 0 27 2R:21169976-21170009 6 LSm1 FBtr0071628 21169967 21170064 TGCATT 6mer3-8 dme-miR-277-3p 2R - 21169969 21170012 3'utr LSm1 FlyBase G19241.1 CTCTTTGTATATTTGTACTGCATTAAAAAACTATGTTAAAACCT 9 21170000 0.989505528 5 9 86 1 1.079181246 0 0.333333333 0.5 9 0 0 12 2R:21169969-21170012 6 15.5 1050 FBgn0261067 205 46.4 71.04 0.075609756 0.334051724 0.218186937 5 6 5.5 0.2 dme-miR-33-5p 6mer2-7 AATGCA 2R 21169989 21169994 + 2R_21169989_21169994_+ 0.944950994 0.922964712 0.933957853 0.015546662 hng1 FBtr0071575 21169943 21170010 2R + 21169969 21170006 3'utr hng1 FlyBase G17876.1 AGGTTTTAACATAGTTTTTTAATGCAGTACAAATATAC 23 21169991 0.821629737 6 20 211 0.807692308 1.322219295 0 0.130434783 0.230769231 23 5 0 21 2R:21169969-21170006 6 hng1 FBtr0071575 21169943 21170010 AATGCA 6mer2-7 dme-miR-33-5p 2R + 21169969 21170007 3'utr hng1 FlyBase G13608.1 AGGTTTTAACATAGTTTTTTAATGCAGTACAAATATACA 18 21169991 0.833590818 3 17 178 0.952380952 1.301029996 0.142857143 0.111111111 0.238095238 18 1 0 20 2R:21169969-21170007 6 19 1051 FBgn0034599 146 16.78333333 25.62333333 0.130136986 1.132075472 0.741511643 -2 -2 -2 0.2 dme-miR-34-5p 6mer2-7 ACTGCC 2R 21174115 21174120 + 2R_21174115_21174120_+ 0.786648621 0.99468871 0.890668666 0.147106565 Xpd FBtr0071576 21174077 21174504 2R + 21174088 21174138 3'utr Xpd FlyBase G17887.1 GGTGCTCTGCCAACCGGCTCTTTGTCGACTGCCTTCCGGGAATAACTCAAC 11 21174121 0.779960928 3 11 75 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 2R:21174088-21174138 6 Xpd FBtr0071576 21174077 21174504 ACTGCC 6mer2-7 dme-miR-34-5p 2R + 21174082 21174134 3'utr Xpd FlyBase G13614.1 GTGGAAGGTGCTCTGCCAACCGGCTCTTTGTCGACTGCCTTCCGGGAATAACT 11 21174121 0.714868072 4 11 82 1 1.113943352 0.230769231 0.181818182 0.307692308 11 0 0 13 2R:21174082-21174134 6 10.5 1052 FBgn0261850 258.9866667 11.14666667 16.99 0.040542628 0.941985646 0.618010594 -6 -6 -6 0.2 dme-miR-317-5p 6mer3-8 GTATCC 2R 21174398 21174403 + 2R_21174398_21174403_+ 0.927390642 0.909184429 0.918287535 0.012873727 Xpd FBtr0071576 21174077 21174504 2R + 21174380 21174407 3'utr Xpd FlyBase G17889.1 GTATCTATACCTGTGATTGTATCCGGAT 11 21174397 0.694988051 5 11 95 1 1.079181246 0 0.090909091 0.166666667 11 0 0 12 2R:21174380-21174407 6 Xpd FBtr0071576 21174077 21174504 GTATCC 6mer3-8 dme-miR-317-5p 2R + 21174354 21174402 3'utr Xpd FlyBase G13615.1 CGAGTTTTGCTCTTGCAGTTGTATTTGTATCTATACCTGTGATTGTATC 12 21174397 0.987362668 5 12 104 1 1.414973348 0 0.583333333 0.807692308 12 0 0 26 2R:21174354-21174402 5 11 1053 FBgn0261850 258.9866667 11.14666667 16.99 0.042473229 0.986842105 0.64743967 1 1 1 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 2R 21192178 21192184 + 2R_21192178_21192184_+ 0.515544721 0.516577036 0.516060879 0.000729946 tud FBtr0342870|FBtr0071582 21192125|21192125 21192913|21192913 2R + 21192066 21192379 stop_codon tud FlyBase G17941.1 TGTCGTACGACTCTTCTACCAGAGCAAGAACATCAGCGAGAAGCTTCAGGAATGTCAGTGATCACCCCGTTGTACAGTCAGATCGGACTCATATGTGCTCCATGCAGGAGATTGTGATTGGGTTGGCTAAAAACATGCGATGTATTATCCATTAAGTTGAACGAGTTAAACTTATTCAAAGGGAAGAGGAGGACACCACACGATTAGCCAAGATGCTTCATTGACTTTTCATGGAAAACCAAAATGAAAGCAATTTTTAATATTAATTAAAGAATCAATACGGAATGCAAAACATTATCACCAAAAACACAACA 474 21192184 0.980054934 35 459 3211 0.970017637 1.837272703 0.276895944 0.160337553 0.298059965 474 10 7 550 2R:21192066-21192379 7 tud FBtr0342870|FBtr0071582 21192125|21192125 21192913|21192913 TGTGATT 7mer-m1 dme-miR-308-3p 2R + 21192096 21192227 stop_codon tud FlyBase G13660.1 CATCAGCGAGAAGCTTCAGGAATGTCAGTGATCACCCCGTTGTACAGTCAGATCGGACTCATATGTGCTCCATGCAGGAGATTGTGATTGGGTTGGCTAAAAACATGCGATGTATTATCCATTAAGTTGAAC 275 21192184 0.983545622 23 256 1974 0.932400932 1.397940009 0.282051282 0.392727273 0.610722611 275 14 15 400 2R:21192096-21192227 7 293 1054 FBgn0003891 6434.526667 87.37 133.74 0.045535595 3.353553851 2.190818005 -6 -6 -6 0.2 dme-miR-8-3p 8mer-A1 CAGTATTA 2R 21309176 21309183 + 2R_21309176_21309183_+ 0.654516284 0.671492399 0.663004341 0.012003915 CG42672 FBtr0302702|FBtr0302703|FBtr0302704|FBtr0344188 21308996|21308996|21308996|21308996 21309434|21309434|21309434|21309434 2R + 21309134 21309187 3'utr CG42672 FlyBase G17967.1 CGATTTCTCGTATTACTTGTTTTATTCTTGCTTTGTCATGGTCAGTATTATTGA 15 21309175 0.990778344 6 14 150 0.947368421 0.954242509 0.368421053 0.266666667 0.421052632 15 0 1 18 2R:21309134-21309187 8 CG42672 FBtr0344188|FBtr0302704|FBtr0302703|FBtr0302702 21308996|21308996|21308996|21308996 21309434|21309434|21309434|21309434 CAGTATTA 8mer-A1 dme-miR-8-3p 2R + 21309127 21309188 3'utr CG42672 FlyBase G13682.1 CGAAACACGATTTCTCGTATTACTTGTTTTATTCTTGCTTTGTCATGGTCAGTATTATTGAC 16 21309175 0.993024053 7 14 169 0.826086957 1.278753601 0.347826087 0.4375 0.608695652 16 4 0 19 2R:21309127-21309188 8 14 1055 FBgn0261554 652.3633333 14.67 22.79 0.021460434 0.954328562 0.61430452 1 1 1 0.2 dme-miR-12-5p 8mer-A1 AATACTCA 2R 21319412 21319419 + 2R_21319412_21319419_+ 0.624508837 0.600332546 0.612420692 0.017095226 CG9485 FBtr0310327|FBtr0071599|FBtr0071601|FBtr0300395|FBtr0300394|FBtr0071600 21319401|21319401|21319401|21319401|21319401|21319401 21319569|21319569|21319569|21319569|21319569|21319569 2R + 21319403 21319445 3'utr CG9485 FlyBase G17973.1 ACCACCGTAAATACTCATATTCAAACCTGTTAGTTGCTACCAA 17 21319432 0.921745471 9 16 121 0.952380952 1.301029996 0.19047619 0.176470588 0.333333333 17 1 0 20 2R:21319403-21319445 8 CG9485 FBtr0300394|FBtr0071600|FBtr0071601|FBtr0300395|FBtr0310327|FBtr0071599 21319401|21319401|21319401|21319401|21319401|21319401 21319569|21319569|21319569|21319569|21319569|21319569 AATACTCA 8mer-A1 dme-miR-12-5p 2R + 21319402 21319444 3'utr CG9485 FlyBase G13685.1 AACCACCGTAAATACTCATATTCAAACCTGTTAGTTGCTACCA 7 21319433 0.983928252 5 7 53 1 0.903089987 0 0.142857143 0.25 7 0 0 8 2R:21319402-21319444 8 9.5 1056 FBgn0034618 1036.04 24.30333333 37.13 0.00916953 0.390892882 0.255857797 -20 -21 -20.5 0.2 dme-miR-14-3p 6mer2-7 AGACTG 2R 21336209 21336214 + 2R_21336209_21336214_+ 0.999842579 0.999956566 0.999899572 8.06E-05 dom FBtr0071604 21336064 21336986 2R + 21335998 21336277 stop_codon dom FlyBase G18016.1 CTAGCTCATCAGCAGCAGTCAGTGGTGTTTCGGGAGGAAATGCCTCCTCGAGCGGAACAGCCAGGTGATGATGTTCACTATCATACCTCAGTCAGTATTATCAGCTGTGTGTGTTGTGTGCGTTTTAGTGGGCGACTAATTATCTGTGGGGAGACGGGTCCTTCCCCGGCTGTTACTGCTGCCAGGCGACTGATGCATAATGAGTATTTATAGACTGTAACAAGTTTCCTTCTATCGTATGAGATAAGTTAGTTAGGCGCCGGAACCCACGCTAGAATCT 341 21336207 0.983059955 42 324 2466 0.955607477 2.310693312 0.119158879 0.211143695 0.371495327 341 18 1 409 2R:21335998-21336277 6 dom FBtr0071604 21336064 21336986 AGACTG 6mer2-7 dme-miR-14-3p 2R + 21336123 21336299 3'utr dom FlyBase G13724.2 TAGTGGGCGACTAATTATCTGTGGGGAGACGGGTCCTTCCCCGGCTGTTACTGCTGCCAGGCGACTGATGCATAATGAGTATTTATAGACTGTAACAAGTTTCCTTCTATCGTATGAGATAAGTTAGTTAGGCGCCGGAACCCACGCTAGAATCTAGAATAACAAATTAAACTTCAT 176 21336207 0.888485132 26 162 1215 0.922509225 1.795880017 0.084870849 0.392045455 0.605166052 176 18 3 250 2R:21336123-21336299 6 193 1057 FBgn0020306 6085.363333 78.23 120.3133333 0.031715444 2.467084239 1.604144733 2 2 2 0.2 dme-miR-1012-3p 8mer-A1 TTGACTAA 2R 21336851 21336858 + 2R_21336851_21336858_+ 0.622531524 0.477704537 0.550118031 0.102408154 dom FBtr0071604 21336064 21336986 2R + 21336814 21336877 3'utr dom FlyBase G18019.1 AATGGAACATTAACAATCTAAAGACTATGAGCATAGATTGACTAACCAATAAGACACAGAACTC 29 21336842 0.692505155 5 25 139 0.921052632 1.544068044 0.315789474 0.310344828 0.473684211 29 3 0 35 2R:21336814-21336877 8 dom FBtr0071604 21336064 21336986 TTGACTAA 8mer-A1 dme-miR-1012-3p 2R + 21336791 21336877 3'utr dom FlyBase G13725.1 AATTTATTTTGTACTCTAACCTAAATGGAACATTAACAATCTAAAGACTATGAGCATAGATTGACTAACCAATAAGACACAGAACTC 24 21336841 0.965206843 6 22 124 0.942857143 1.51851394 0.142857143 0.333333333 0.542857143 24 2 0 33 2R:21336791-21336877 8 16 1058 FBgn0020306 6085.363333 78.23 120.3133333 0.00262926 0.204525118 0.132986092 9 10 9.5 0.2 dme-bantam-3p 8mer-A1 TGATCTCA 2R 21341389 21341396 + 2R_21341389_21341396_+ 0.620771395 0.624640845 0.62270612 0.002736079 dom FBtr0342890|FBtr0071603 21341126|21341126 21341847|21341847 2R + 21341362 21341655 stop_codon dom FlyBase G18032.2 CAGTCAATCAGCCCGTCATTGCTAAATTGATCTCAATTTCTGTCGATTGGTTTTGCAGCCATGAGCGATCTAACTGTTCTGGAGGATTGTGAGCTCAAGGTGAAACGCTGAAGATTACAACGATGATCGCTTCAATCAGCTCAAGGCATGGAAGCCGTATTACTAATTTTACTGATCCTTAGATATAGCACCTTAGCTTAAGTGAAATTTCATTGTATCTATTCATATTACGAGAATAGTTTTAAGGAAGTGTAGGTGGAGTGCCTAGTGTGTAGGCTAACTGCTTTAAATTCA 265 21341388 0.877750261 45 254 2351 0.957928803 1.994170456 0.090614887 0.15530303 0.278317152 264 11 2 296 2R:21341362-21341655 8 dom FBtr0071603|FBtr0342890 21341126|21341126 21341847|21341847 TGATCTCA 8mer-A1 dme-bantam-3p 2R + 21341348 21341497 stop_codon dom FlyBase G13736.1 ATCAGTCAGTCAGTCAGTCAATCAGCCCGTCATTGCTAAATTGATCTCAATTTCTGTCGATTGGTTTTGCAGCCATGAGCGATCTAACTGTTCTGGAGGATTGTGAGCTCAAGGTGAAACGCTGAAGATTACAACGATGATCGCTTCAAT 173 21341388 0.989425342 18 160 1550 0.921259843 2.369215857 0.062992126 0.323699422 0.539370079 173 20 0 234 2R:21341348-21341497 8 179 1059 FBgn0020306 6085.363333 78.23 120.3133333 0.029414842 2.28812476 1.487781903 1 1 1 0.2 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2R 21341789 21341794 + 2R_21341789_21341794_+ 0.999997275 0.992630401 0.996313838 0.005209185 dom FBtr0342890|FBtr0071602|FBtr0071603 21341126|21341424|21341126 21341847|21341847|21341847 2R + 21341691 21341799 3'utr dom FlyBase G18033.1 CTATTCCCGTAGAGCAGTATGTACATTGGTAAATCTAATTCAGATCTATCAGATACTACATAAACACACCTAATATGTAGCTATAACTAAATGTCCTTTCTAGTTGTAT 19 21341787 0.986855854 9 17 154 0.913043478 1.322219295 0.173913043 0.210526316 0.347826087 19 2 0 21 2R:21341691-21341799 6 dom FBtr0071603|FBtr0342890|FBtr0071602 21341126|21341126|21341424 21341847|21341847|21341847 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 21341698 21341799 3'utr dom FlyBase G13738.1 CGTAGAGCAGTATGTACATTGGTAAATCTAATTCAGATCTATCAGATACTACATAAACACACCTAATATGTAGCTATAACTAAATGTCCTTTCTAGTTGTAT 15 21341788 0.988854569 8 14 131 0.944444444 1.230448921 0.333333333 0.2 0.333333333 15 1 0 17 2R:21341698-21341799 6 7 1060 FBgn0020306 6085.363333 78.23 120.3133333 0.001150301 0.089479739 0.058181415 2 1 1.5 0.2 dme-miR-1002-5p 6mer3-8 CTACTT 2R 21355075 21355080 - 2R_21355075_21355080_- 0.88368448 0.924321345 0.904002913 0.028734557 cv-2 FBtr0071610 21355013 21356005 2R - 21355048 21355096 3'utr cv-2 FlyBase G25470.1 AATAACTCTTTATATACTACTTGTATGGCTGGAACTGTAAGTTTACGAT 5 21355082 0.987447398 4 5 50 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2R:21355048-21355096 6 cv-2 FBtr0071610 21355013 21356005 CTACTT 6mer3-8 dme-miR-1002-5p 2R - 21355058 21355082 3'utr cv-2 FlyBase G19262.1 TACTACTTGTATGGCTGGAACTGTA 5 21355075 0.634511094 2 3 34 0.555555556 0.698970004 0 0.6 0.777777778 5 4 0 5 2R:21355058-21355082 6 5 1061 FBgn0000395 482.9966667 13.41666667 20.45666667 0.010352038 0.372670807 0.244419097 2 -5 -1.5 0.2 dme-miR-263a-5p 7mer-m1 TGCCATT 2R 21355152 21355158 - 2R_21355152_21355158_- 0.761357236 0.675883635 0.718620435 0.060438962 cv-2 FBtr0071610 21355013 21356005 2R - 21355135 21355203 3'utr cv-2 FlyBase G25471.1 CAGCTAATTATGCACCTAACCGGCGGAAAGGAGGAGTCAGCTCTTTGCCATTTTTCGATTCTACAAATT 8 21355152 0.966570076 6 8 47 1 0.903089987 0 0 0 8 0 0 8 2R:21355135-21355203 7 cv-2 FBtr0071610 21355013 21356005 TGCCATT 7mer-m1 dme-miR-263a-5p 2R - 21355152 21355183 3'utr cv-2 FlyBase G19263.1 CGGCGGAAAGGAGGAGTCAGCTCTTTGCCATT 6 21355159 0.975610347 2 4 27 0.625 0.698970004 0.25 0.333333333 0.5 6 3 0 5 2R:21355152-21355183 6 4.5 1062 FBgn0000395 482.9966667 13.41666667 20.45666667 0.009316834 0.335403727 0.219977188 -6 1 -2.5 0.2 dme-miR-980-5p 7mer-m1 AAAAACT 2R 21355529 21355535 - 2R_21355529_21355535_- 0.600854412 0.572175595 0.586515003 0.020278974 cv-2 FBtr0071610 21355013 21356005 2R - 21355505 21355638 3'utr cv-2 FlyBase G25474.1 TTATCCGGAGATCCTGTTGTTGCTTGTGTGCCTGTTTTGTATTTGTATTTGTATTTGTACTACTATATGTGTGTTTCGTCGCTGCGCTAAACTAAACTGATCTAAAAACTATAACTATAATTATAACTATAACT 52 21355541 0.849850421 13 46 396 0.861538462 1.447158031 0.307692308 0.192307692 0.353846154 52 8 1 56 2R:21355505-21355638 7 cv-2 FBtr0071610 21355013 21356005 AAAAACT 7mer-m1 dme-miR-980-5p 2R - 21355522 21355638 3'utr cv-2 FlyBase G19265.1 TTATCCGGAGATCCTGTTGTTGCTTGTGTGCCTGTTTTGTATTTGTATTTGTATTTGTACTACTATATGTGTGTTTCGTCGCTGCGCTAAACTAAACTGATCTAAAAACTATAACTA 34 21355541 0.831257545 13 33 259 0.97826087 1.653212514 0.347826087 0.323529412 0.5 34 1 0 45 2R:21355522-21355638 7 26 1063 FBgn0000395 482.9966667 13.41666667 20.45666667 0.053830599 1.937888199 1.270979306 6 6 6 0.2 dme-miR-970-3p 7mer-A1 CTTATGA 2R 21383486 21383492 - 2R_21383486_21383492_- 0.802554069 0.629112537 0.715833303 0.122641731 CG10795 FBtr0071609 21383225 21383560 2R - 21383447 21383507 3'utr CG10795 FlyBase G25482.1 ATACCTTAAGTACGGCTTATGACACTAACGATAAGCAACGACTGCGGATCCGTTCCGATCG 29 21383507 0.866713292 7 10 112 0.766666667 1.06069784 0.2 0.153846154 0.266666667 26 6 1 23 2R:21383447-21383507 7 CG10795 FBtr0071609 21383225 21383560 CTTATGA 7mer-A1 dme-miR-970-3p 2R - 21383448 21383523 3'utr CG10795 FlyBase G19270.1 ACTTTAAGTCCTTGTTATACCTTAAGTACGGCTTATGACACTAACGATAAGCAACGACTGCGGATCCGTTCCGATC 14 21383507 0.791009166 10 11 86 0.772727273 0.62838893 0.181818182 0.5 0.681818182 14 2 3 17 2R:21383448-21383523 7 7 1064 FBgn0034626 77 8.706666667 13.28666667 0.090909091 0.803981623 0.526843954 15 15 15 0.2 dme-miR-999-3p 7mer-m8 AGTTAAC 2R 21486857 21486863 + 2R_21486857_21486863_+ 0.674514262 0.674509433 0.674511848 3.46E-06 Sara FBtr0071641 21486704 21487107 2R + 21486826 21486905 3'utr Sara FlyBase G18067.1 ATGAGGACATGTTGGTATTGTTGGATGGCTCAGTTAACTGTGTATATATTTAAGTAGCTCATCGTTTGGTTTTTGTCTAT 33 21486860 0.648207506 17 30 342 0.918918919 1.531478917 0.162162162 0.121212121 0.216216216 33 3 0 34 2R:21486826-21486905 7 Sara FBtr0071641 21486704 21487107 AGTTAAC 7mer-m8 dme-miR-999-3p 2R + 21486808 21486909 3'utr Sara FlyBase G13761.1 GAGTCCATGGGGCAAGAAATGAGGACATGTTGGTATTGTTGGATGGCTCAGTTAACTGTGTATATATTTAAGTAGCTCATCGTTTGGTTTTTGTCTATACAT 15 21486837 0.988138844 11 15 141 1 1.361727836 0.217391304 0.4 0.608695652 15 0 0 23 2R:21486808-21486909 7 10.5 1065 FBgn0026369 1340.356667 34.97 53.53333333 0.007833736 0.300257363 0.196139477 -3 20 8.5 0.2 dme-miR-11-3p 7mer-m1 TGTGATG 2R 21487034 21487040 + 2R_21487034_21487040_+ 0.534864146 0.535584551 0.535224349 0.00050947 Sara FBtr0071641 21486704 21487107 2R + 21486991 21487082 3'utr Sara FlyBase G18069.1 AAGTAAAACGTATCTAAGAAACCTAAATATATATATATTTGTATGTGATGTTCTTTAATATGCTTTACACATTTACCACTCGAGTATATATG 26 21487031 0.994925881 9 22 300 0.9 0.954242509 0.066666667 0.153846154 0.266666667 26 1 2 27 2R:21486991-21487082 7 Sara FBtr0071641 21486704 21487107 TGTGATG 7mer-m1 dme-miR-11-3p 2R + 21487007 21487083 3'utr Sara FlyBase G13762.1 AGAAACCTAAATATATATATATTTGTATGTGATGTTCTTTAATATGCTTTACACATTTACCACTCGAGTATATATGA 18 21487030 0.992858473 9 16 210 0.821428571 0.884606581 0.178571429 0.388888889 0.607142857 18 3 2 23 2R:21487007-21487083 7 18 1066 FBgn0026369 1340.356667 34.97 53.53333333 0.013429261 0.514726909 0.336239103 3 4 3.5 0.2 dme-miR-2a-2-5p 7mer-m1 GATGAGG 2R 21487554 21487560 - 2R_21487554_21487560_- 0.650883361 0.625848553 0.638365957 0.017702277 Fkbp14 FBtr0300397|FBtr0342897|FBtr0342896|FBtr0071703|FBtr0306013 21487165|21487165|21487165|21487165|21487165 21487665|21487665|21487665|21487665|21487665 2R - 21487442 21487581 3'utr Fkbp14 FlyBase G25505.1 AAAAATAGAACATATACAACAGATGAGGCACGAGCCGAGCAATAAATCGAGTGCAACCAAATGCTTCCCGATGTCATTTTGTATATAGCATACATATCAGCATCAGCATCAGCATCTGCATCTGCATCTAAACACCAACA 121 21487558 0.993367532 14 119 293 0.993197279 2.164352856 0.013605442 0.181818182 0.326530612 121 1 0 146 2R:21487442-21487581 7 Fkbp14 FBtr0071703|FBtr0306013|FBtr0342897|FBtr0342896|FBtr0300397 21487165|21487165|21487165|21487165|21487165 21487665|21487665|21487665|21487665|21487665 GATGAGG 7mer-m1 dme-miR-2a-2-5p 2R - 21487459 21487581 3'utr Fkbp14 FlyBase G19288.1 AAAAATAGAACATATACAACAGATGAGGCACGAGCCGAGCAATAAATCGAGTGCAACCAAATGCTTCCCGATGTCATTTTGTATATAGCATACATATCAGCATCAGCATCAGCATCTGCATCT 58 21487558 0.982340569 8 53 142 0.923913043 1.452297671 0 0.413793103 0.630434783 58 5 2 85 2R:21487459-21487581 7 68 1067 FBgn0010470 1256.333333 117.3933333 179.62 0.054125763 0.579249248 0.378576996 -2 -2 -2 0.2 dme-miR-92b-3p 6mer3-8 GTGCAA 2R 21512684 21512689 + 2R_21512684_21512689_+ 0.988926429 0.984199908 0.986563169 0.00334214 MESK2 FBtr0089710|FBtr0089703 21512447|21512447 21512725|21512725 2R + 21512570 21512706 3'utr MESK2 FlyBase G18084.1 ACGCACACACAAAGTACACAAACGTCCCTGACCCAACCTGATTTTAGTCTAAACGAAAATCTTTGAGAATCAAAAGCTTTTTGAGATGCATTGAAACGAAACCAAAAATCTATTGTGCAAAATTTTATATTTACAAA 125 21512682 0.957945587 18 121 707 0.972413793 2.149219113 0.034482759 0.128 0.248275862 125 4 0 141 2R:21512570-21512706 6 MESK2 FBtr0089703|FBtr0089710 21512447|21512447 21512725|21512725 GTGCAA 6mer3-8 dme-miR-92b-3p 2R + 21512575 21512706 3'utr MESK2 FlyBase G13772.1 CACACAAAGTACACAAACGTCCCTGACCCAACCTGATTTTAGTCTAAACGAAAATCTTTGAGAATCAAAAGCTTTTTGAGATGCATTGAAACGAAACCAAAAATCTATTGTGCAAAATTTTATATTTACAAA 90 21512682 0.952035687 13 89 496 0.992424242 2.117271296 0.068181818 0.344444444 0.553030303 90 1 0 131 2R:21512575-21512706 6 49 1068 FBgn0043070 584.3833333 29.10666667 44.48666667 0.083849072 1.683463124 1.101453619 2 2 2 0.2 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2R 21605708 21605713 - 2R_21605708_21605713_- 0.941461788 0.946205008 0.943833398 0.003353949 CG10433 FBtr0071690|FBtr0344882|FBtr0071691 21605674|21605674|21605674 21606071|21606071|21606325 2R - 21605679 21605797 3'utr CG10433 FlyBase G25520.1 TTAACTATATGTATATTAATTATATTGTACGAATAATTTTGTATGACATCTTAAGAGCCCCAAATCTACCCACAATGTGAAATATTTGACTGCTTCCAATAAATGCATTGTAAATATTT 53 21605712 0.983568705 15 51 406 0.942028986 1.812913357 0.507246377 0.264150943 0.434782609 53 4 0 65 2R:21605679-21605797 6 CG10433 FBtr0071691|FBtr0344882|FBtr0071690 21605674|21605674|21605674 21606325|21606071|21606071 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2R - 21605676 21605759 3'utr CG10433 FlyBase G19305.1 TTGTATGACATCTTAAGAGCCCCAAATCTACCCACAATGTGAAATATTTGACTGCTTCCAATAAATGCATTGTAAATATTTTCC 44 21605704 0.831555834 13 42 297 0.970149254 1.511883361 0.447761194 0.363636364 0.582089552 44 1 1 65 2R:21605676-21605759 6 39 1069 FBgn0034638 6526.64 846.7433333 1285.906667 0.00597551 0.046058821 0.030328795 -1 -9 -5 0.2 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2R 21606062 21606068 - 2R_21606062_21606068_- 0.799319718 0.534479412 0.666899565 0.187270372 CG10433 FBtr0071691|FBtr0071691 21605674|21605674 21606325|21606325 2R - 21606017 21606174 stop_codon CG10433 FlyBase G25523.1 CTGTGCGGAACACCTGGGACAGTGCATGGACCGATGCCACCAGAGGCTCCTGCGACCCGGTTCGGATTGCAAGAATGGCCAAGTCTGCTGCGTCCTGATTTAGTTATACTTAACCACACCATACACATACCCGTGCAGAGGAACAGCATCGTCAAATG 52 21606078 0.976479716 16 49 320 0.966101695 1.755874856 0.152542373 0.115384615 0.220338983 52 2 0 57 2R:21606017-21606174 7 CG10433 FBtr0071691|FBtr0071691 21605674|21605674 21606325|21606325 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2R - 21606061 21606103 stop_codon CG10433 FlyBase G19307.1 AGAATGGCCAAGTCTGCTGCGTCCTGATTTAGTTATACTTAAC 14 21606078 0.738780726 5 13 120 0.92 1.361727836 0.12 0.571428571 0.76 14 2 0 23 2R:21606061-21606103 7 9 1070 FBgn0034638 6526.64 846.7433333 1285.906667 0.001378964 0.010628959 0.006998953 10 10 10 0.2 dme-miR-92b-3p 6mer2-7 TGCAAT 2R 21614881 21614886 - 2R_21614881_21614886_- 0.986199308 0.98798806 0.987093684 0.001264873 CG18870 FBtr0071688|FBtr0345664 21614761|21613843 21615593|21615593 2R - 21614852 21614965 3'utr CG18870 FlyBase G25531.1 TCAATTTCGAGTATAAGATGTAGGCGCATACGCTCACAAGATAATGTACGAACTACAGTATTTACTCCACACATGTAACTGCAATGTAACTGAAAGTTCGGGCTAGTGGTCAGT 21 21614881 0.969143481 8 21 115 1 1.380211242 0.125 0.095238095 0.208333333 21 0 0 24 2R:21614852-21614965 6 CG18870 FBtr0345664|FBtr0071688 21613843|21614761 21615593|21615593 TGCAAT 6mer2-7 dme-miR-92b-3p 2R - 21614856 21614976 3'utr CG18870 FlyBase G19310.1 GTGTCAATTGTTCAATTTCGAGTATAAGATGTAGGCGCATACGCTCACAAGATAATGTACGAACTACAGTATTTACTCCACACATGTAACTGCAATGTAACTGAAAGTTCGGGCTAGTGGT 22 21614881 0.968206536 9 20 120 0.9 1.431363764 0.2 0.272727273 0.466666667 22 3 0 27 2R:21614856-21614976 6 12.5 1071 FBgn0042180 173 9.316666667 14.31333333 0.072254335 1.341681574 0.873311598 -5 -5 -5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG 2R 21615068 21615074 - 2R_21615068_21615074_- 0.702797588 0.702817049 0.702807318 1.37E-05 CG18870 FBtr0071688|FBtr0345664 21614761|21613843 21615593|21615593 2R - 21615043 21615102 3'utr CG18870 FlyBase G25533.1 AAGACTGGGCCGAGCATTCCACATAGTTGTACCTGTTTCTGTACTGCATAGATATGTATA 155 21615075 0.744084706 10 148 1397 0.948186528 2.26245109 0.062176166 0.2 0.357512953 155 10 0 183 2R:21615043-21615102 7 CG18870 FBtr0345664|FBtr0071688 21613843|21614761 21615593|21615593 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" 2R - 21615044 21615102 3'utr CG18870 FlyBase G19312.1 AAGACTGGGCCGAGCATTCCACATAGTTGTACCTGTTTCTGTACTGCATAGATATGTAT 113 21615075 0.901522729 8 109 993 0.957575758 1.897627091 0.096969697 0.336283186 0.545454545 113 6 1 158 2R:21615044-21615102 7 129.5 1072 FBgn0042180 173 9.316666667 14.31333333 0.748554913 13.89982111 9.047508151 1 1 1 0.2 dme-miR-92b-3p 6mer2-7 TGCAAT 2R 21619359 21619364 - 2R_21619359_21619364_- 0.929813522 0.771769644 0.850791583 0.111753913 PTP-ER FBtr0071686 21619319 21620046 2R - 21619330 21619406 3'utr PTP-ER FlyBase G25547.1 AAGTAAAATGGAAACCCATAAATGAACATGTATTTAAGTTTATGCAATGGAACTAGTCAAATAAAAATTAGAAACAT 65 21619359 0.977130468 10 55 356 0.875 1.367976785 0.1875 0.184615385 0.3375 65 8 2 70 2R:21619330-21619406 6 PTP-ER FBtr0071686 21619319 21620046 TGCAAT 6mer2-7 dme-miR-92b-3p 2R - 21619332 21619386 3'utr PTP-ER FlyBase G19319.1 AATGAACATGTATTTAAGTTTATGCAATGGAACTAGTCAAATAAAAATTAGAAAC 37 21619359 0.970019958 6 31 179 0.890909091 1.69019608 0.181818182 0.324324324 0.545454545 37 6 0 49 2R:21619332-21619386 6 46 1073 FBgn0016641 329.97 7.83 11.97333333 0.139406613 5.874840358 3.841870824 -5 -5 -5 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 21619648 21619653 - 2R_21619648_21619653_- 0.999997651 0.999106799 0.999552225 0.000629961 PTP-ER FBtr0071686 21619319 21620046 2R - 21619601 21619677 3'utr PTP-ER FlyBase G25548.2 AATTATTATACCCTACCTTACCTTACCAAAACCATACCTTACCATAAAGATGCGCATCTATATATGACTCGCGACGT 26 21619627 0.861228897 10 22 159 0.8 0.970036777 0 0.346153846 0.514285714 26 5 2 28 2R:21619601-21619677 6 PTP-ER FBtr0071686 21619319 21620046 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 21619612 21619673 3'utr PTP-ER FlyBase G19320.1 ATTATACCCTACCTTACCTTACCAAAACCATACCTTACCATAAAGATGCGCATCTATATATG 17 21619660 0.796097938 7 16 101 0.952380952 1.301029996 0 0.235294118 0.380952381 17 1 0 20 2R:21619612-21619673 6 12 1074 FBgn0016641 329.97 7.83 11.97333333 0.036366942 1.53256705 1.002227171 -26 7 -9.5 0.2 dme-miR-305-5p 6mer2-7 GTACAA 2R 21631215 21631220 + 2R_21631215_21631220_+ 0.605696767 0.541532883 0.573614825 0.045370729 mahj FBtr0304728|FBtr0071658 21630876|21630876 21631422|21631276 2R + 21631187 21631231 3'utr mahj FlyBase G18105.1 ATCTATAAATTGTTTAACAATTTTCATTGTACAAGCCTGAATAAA 6 21631213 0.983126183 3 5 40 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 2R:21631187-21631231 6 mahj FBtr0304728|FBtr0071658 21630876|21630876 21631422|21631276 GTACAA 6mer2-7 dme-miR-305-5p 2R + 21631188 21631228 3'utr mahj FlyBase G13790.1 TCTATAAATTGTTTAACAATTTTCATTGTACAAGCCTGAAT 5 21631213 0.983945263 2 5 40 1 0.84509804 0.285714286 0.2 0.428571429 5 0 0 7 2R:21631188-21631228 6 4.5 1075 FBgn0034641 1067.043333 24.44 37.54 0.004217261 0.184124386 0.119872136 2 2 2 0.2 dme-miR-305-3p 7mer-A1 TGTGCCA 2R 21638217 21638223 + 2R_21638217_21638223_+ 0.611030127 0.578011446 0.594520787 0.023347747 CG10321 FBtr0071660|FBtr0330228 21637910|21637970 21638399|21638399 2R + 21638138 21638235 3'utr CG10321 FlyBase G18127.1 AGCAGATACGAAACTTTAGGTAGGCAGATCGAGGCGGATCCTCACATCCAAACGCTTGGGGCATAAATCCTGCGTGGACTGTGCCAGTTTTTGTTTTT 71 21638219 0.882143491 10 69 374 0.974683544 1.58546073 0.17721519 0.098591549 0.189873418 71 1 1 77 2R:21638138-21638235 7 CG10321 FBtr0330228|FBtr0071660 21637970|21637910 21638399|21638399 TGTGCCA 7mer-A1 dme-miR-305-3p 2R + 21638131 21638236 3'utr CG10321 FlyBase G13803.1 TTTTGTAAGCAGATACGAAACTTTAGGTAGGCAGATCGAGGCGGATCCTCACATCCAAACGCTTGGGGCATAAATCCTGCGTGGACTGTGCCAGTTTTTGTTTTTA 54 21638219 0.764653944 12 52 272 0.952380952 1.425968732 0.30952381 0.388888889 0.607142857 54 2 2 80 2R:21638131-21638236 7 43.5 1076 FBgn0034643 611.73 22.34 34.24 0.071109803 1.947179946 1.270443925 -2 -2 -2 0.2 dme-miR-14-3p 6mer2-7 AGACTG 2R 21638281 21638286 + 2R_21638281_21638286_+ 0.945804574 0.929705934 0.937755254 0.0113835 CG10321 FBtr0071660|FBtr0330228 21637910|21637970 21638399|21638399 2R + 21638240 21638307 3'utr CG10321 FlyBase G18128.1 TTATTACCCTACTATTATTATTTTGTTTTCCCGGGGAATACAGACTGGCATTTTAGGCTAAACGTATT 104 21638278 0.986806351 7 100 705 0.965517241 2.049218023 0.086206897 0.105769231 0.198275862 104 4 0 112 2R:21638240-21638307 6 CG10321 FBtr0330228|FBtr0071660 21637970|21637910 21638399|21638399 AGACTG 6mer2-7 dme-miR-14-3p 2R + 21638240 21638341 3'utr CG10321 FlyBase G13804.1 TTATTACCCTACTATTATTATTTTGTTTTCCCGGGGAATACAGACTGGCATTTTAGGCTAAACGTATTTTGGCGTTGGGTTTTCATTGTTGGGCTTTGAAAT 62 21638278 0.980888622 9 58 407 0.943820225 1.924279286 0.134831461 0.370967742 0.561797753 62 5 0 84 2R:21638240-21638341 6 78 1077 FBgn0034643 611.73 22.34 34.24 0.127507234 3.491495076 2.278037383 3 3 3 0.2 dme-miR-33-5p 8mer-A1 CAATGCAA 2R 21657623 21657630 + 2R_21657623_21657630_+ 0.549789378 0.634266766 0.592028072 0.059734542 CG10082 FBtr0071661 21657072 21657935 2R + 21657598 21657679 3'utr CG10082 FlyBase G18156.1 GATTTTATACCTAGCCATTACAATTCAATGCAAAATGACAAAGCGATAGAGCGTAATCATCAGTATTTCGTTGTATGTATCT 28 21657622 0.859954774 5 28 207 1 1.491361694 0.612903226 0.107142857 0.193548387 28 0 0 31 2R:21657598-21657679 8 CG10082 FBtr0071661 21657072 21657935 CAATGCAA 8mer-A1 dme-miR-33-5p 2R + 21657608 21657670 3'utr CG10082 FlyBase G13821.1 CTAGCCATTACAATTCAATGCAAAATGACAAAGCGATAGAGCGTAATCATCAGTATTTCGTTG 23 21657622 0.800931886 3 22 138 0.939393939 1.491361694 0.575757576 0.304347826 0.515151515 23 2 0 31 2R:21657608-21657670 8 14 1078 FBgn0034644 417.2733333 12.82666667 19.61 0.03355115 1.091476091 0.713921469 1 1 1 0.2 dme-miR-11-3p 7mer-m1 TGTGATG 2R 21692013 21692019 + 2R_21692013_21692019_+ 0.505285932 0.502617862 0.503951897 0.001886561 CG42496 FBtr0300625|FBtr0342958 21691979|21691979 21692764|21692764 2R + 21691973 21692044 start_codon CG42496 FlyBase G18183.1 AGCAATAGCCGGCATTGTGAGCCATGAAACCCGAACGTAATGTGATGATAGCGGCCACCGGAAGTGTGGCCA 45 21692021 0.972963913 9 33 193 0.759259259 1.010723865 0.518518519 0.177777778 0.314814815 45 10 3 41 2R:21691973-21692044 7 CG42496 FBtr0342958|FBtr0300625 21691979|21691979 21692764|21692764 TGTGATG 7mer-m1 dme-miR-11-3p 2R + 21691977 21692058 start_codon CG42496 FlyBase G13838.1 ATAGCCGGCATTGTGAGCCATGAAACCCGAACGTAATGTGATGATAGCGGCCACCGGAAGTGTGGCCACCATTAAGTTAGCC 36 21692021 0.955417194 5 31 148 0.928571429 1.414973348 0.5 0.388888889 0.607142857 36 3 1 52 2R:21691977-21692058 7 35 1079 FBgn0260222 113.5 13.05 20.08333333 0.308370044 2.681992337 1.742738589 -8 -8 -8 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 21716636 21716643 + 2R_21716636_21716643_+ 0.587248646 0.592074757 0.589661701 0.003412639 HmgD FBtr0071709|FBtr0071708 21715879|21715879 21716727|21716727 2R + 21716482 21716689 3'utr HmgD FlyBase G18195.1 ACGAAAAACAATACACACACCGCAAATGAATCGAACGAAATTTCGCTCAGGTCTTTTCGTCATTTTGCATTAAACTTAATGTTTAACGTCTTGTTAGCTAAAGATGTATAGCAGAAGAGGAAGTCGGAAGTTAGATGAGACAAGCAGATGTAATTGCATTTAATCGGTAGTTTTAATTGATTACTATACGTACTATTTAAAGAGAAAA 561 21716635 0.989745973 24 546 5364 0.975688817 2.001445241 0.235008104 0.08912656 0.171799028 561 10 5 602 2R:21716482-21716689 8 HmgD FBtr0071709|FBtr0071708 21715879|21715879 21716727|21716727 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 21716590 21716663 3'utr HmgD FlyBase G13848.1 TAGCAGAAGAGGAAGTCGGAAGTTAGATGAGACAAGCAGATGTAATTGCATTTAATCGGTAGTTTTAATTGATT 304 21716635 0.975189149 13 291 2786 0.958963283 2.170261715 0.306695464 0.368421053 0.585313175 304 17 2 444 2R:21716590-21716663 8 394 1080 FBgn0004362 7189.043333 869.6 1331.753333 0.054805623 0.453081877 0.295850583 1 1 1 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 2R 21717304 21717309 - 2R_21717304_21717309_- 0.99807472 0.965061653 0.981568186 0.023343716 Tango11 FBtr0342965|FBtr0071747|FBtr0071746 21716778|21716778|21716778 21717417|21717417|21717417 2R - 21717235 21717384 3'utr Tango11 FlyBase G25606.1 TCTGCGCTGGGTGCCAAGACAACCACCTTGCTATGGACACCCTTTTTGGAACAGCTTCTTTCGTTTCTTGACTTTTGTGTTTCTTTTGTGGAAAGGCTCTGAGAGAGACTTTGTTTTTTGTTTGCCATAATTTTGTAGACTAAGCTCCGT 55 21717310 0.926836458 21 54 503 0.984126984 1.491361694 0.19047619 0.127272727 0.238095238 55 0 1 62 2R:21717235-21717384 6 Tango11 FBtr0071746|FBtr0071747|FBtr0342965 21716778|21716778|21716778 21717417|21717417|21717417 TGTGTT 6mer3-8 dme-miR-317-3p 2R - 21717239 21717335 3'utr Tango11 FlyBase G19365.1 AACAGCTTCTTTCGTTTCTTGACTTTTGTGTTTCTTTTGTGGAAAGGCTCTGAGAGAGACTTTGTTTTTTGTTTGCCATAATTTTGTAGACTAAGCT 40 21717310 0.768185878 11 37 411 0.952380952 1.77815125 0.26984127 0.4 0.619047619 40 3 0 60 2R:21717239-21717335 6 19.5 1081 FBgn0050404 496.0066667 38.97333333 59.5 0.039313988 0.500342114 0.327731092 1 1 1 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 2R 21975811 21975816 + 2R_21975811_21975816_+ 0.964225863 0.965291296 0.96475858 0.000753352 CG9304 FBtr0071726|FBtr0345537 21975523|21975523 21976196|21976386 2R + 21975790 21975826 3'utr CG9304 FlyBase G18216.1 AAGTTAACATTTAACTGACTTTTGACTTGAGCTGAGT 6 21975811 0.762634674 3 6 54 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 2R:21975790-21975826 6 CG9304 FBtr0071726|FBtr0345537 21975523|21975523 21976196|21976386 TTGACT 6mer3-8 dme-miR-1012-3p 2R + 21975790 21975825 3'utr CG9304 FlyBase G13868.1 AAGTTAACATTTAACTGACTTTTGACTTGAGCTGAG 11 21975810 0.821556826 4 11 80 1 1.278753601 0.473684211 0.545454545 0.736842105 11 0 0 19 2R:21975790-21975825 6 8.5 1082 FBgn0034674 656.3166667 28.69666667 44.06 0.012951065 0.296201649 0.192918747 0 1 0.5 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 2R 21975944 21975950 + 2R_21975944_21975950_+ 0.521175411 0.521118662 0.521147037 4.01E-05 CG9304 FBtr0071726|FBtr0345537 21975523|21975523 21976196|21976386 2R + 21975913 21975982 3'utr CG9304 FlyBase G18218.1 AGCGAGTGCAAGAATGCACCAGAGATTGTTGTGTGATTTTATGTAATATGCTTGAATTTATAATTAGTTT 51 21975942 0.991628349 10 50 544 0.983870968 1.785329835 0.064516129 0.196078431 0.338709677 51 1 0 61 2R:21975913-21975982 7 CG9304 FBtr0071726|FBtr0345537 21975523|21975523 21976196|21976386 TGTGATT 7mer-m1 dme-miR-308-3p 2R + 21975911 21975964 3'utr CG9304 FlyBase G13870.1 AGAGCGAGTGCAAGAATGCACCAGAGATTGTTGTGTGATTTTATGTAATATGCT 32 21975942 0.991411445 8 31 336 0.979166667 1.672097858 0.125 0.40625 0.604166667 32 1 0 47 2R:21975911-21975964 7 40 1083 FBgn0034674 656.3166667 28.69666667 44.06 0.06094619 1.393890115 0.907852928 2 2 2 0.2 dme-miR-965-3p 7mer-m8 TACGCTT 2R 21976016 21976022 + 2R_21976016_21976022_+ 0.53989114 0.541027417 0.540459279 0.000803485 CG9304 FBtr0071726|FBtr0345537 21975523|21975523 21976196|21976386 2R + 21976003 21976035 3'utr CG9304 FlyBase G18219.1 CGATTCGATACAATACGCTTCAGCATCATCATT 51 21976016 0.873361361 3 50 258 0.984375 1.799340549 0.03125 0.235294118 0.390625 51 1 0 63 2R:21976003-21976035 7 CG9304 FBtr0071726|FBtr0345537 21975523|21975523 21976196|21976386 TACGCTT 7mer-m8 dme-miR-965-3p 2R + 21976003 21976050 3'utr CG9304 FlyBase G13871.1 CGATTCGATACAATACGCTTCAGCATCATCATTTCGTTGCGGTAGTTT 43 21976016 0.956900754 5 43 206 1 1.812913357 0.076923077 0.325581395 0.553846154 43 0 0 65 2R:21976003-21976050 7 46 1084 FBgn0034674 656.3166667 28.69666667 44.06 0.070088118 1.602973632 1.044030867 0 0 0 0.2 dme-miR-184-5p 8mer-A1 TGATAAGA 2R 22069514 22069521 + 2R_22069514_22069521_+ 0.584625549 0.583402373 0.584013961 0.000864862 Snp FBtr0339101|FBtr0339102|FBtr0339100|FBtr0339099 22069312|22069312|22069312|22069312 22069757|22069757|22069757|22069757 2R + 22069469 22069573 3'utr Snp FlyBase G18225.1 TTTTTTTTTTTTTGCCCTGATTTTATATTTTATTGTAACGGCAATTGATAAGACTTGAACAATTCGAAGCATCGCAGCGATCATACATACAAATAAATTTATAAA 66 22069516 0.965860183 7 64 352 0.950617284 1.886490725 0.12345679 0.181818182 0.333333333 66 4 0 77 2R:22069469-22069573 8 Snp FBtr0339100|FBtr0339099|FBtr0339101|FBtr0339102 22069312|22069312|22069312|22069312 22069757|22069757|22069757|22069757 TGATAAGA 8mer-A1 dme-miR-184-5p 2R + 22069500 22069538 3'utr Snp FlyBase G13876.1 ATTGTAACGGCAATTGATAAGACTTGAACAATTCGAAGC 26 22069516 0.692366864 6 20 124 0.825 1.51851394 0.1 0.461538462 0.65 26 7 0 33 2R:22069500-22069538 8 38 1085 FBgn0265192 273.9833333 20.67666667 31.70333333 0.138694568 1.837820409 1.198612133 -2 -2 -2 0.2 dme-miR-8-3p 7mer-A1 AGTATTA 2R 22077766 22077772 + 2R_22077766_22077772_+ 0.823047659 0.819394931 0.821221295 0.00258292 GlcT-1 FBtr0071755 22077671 22079381 2R + 22077680 22077961 3'utr GlcT-1 FlyBase G18240.1 TAGTTAAGTTTGTTATTTTGTACTTGTGAGCAAACGAACTCAGCGGACTGCAAGCGACTGGCGGGCGGCGTCTAGCGTCTGGTAGTAGTATTATTAGCTGAACCTTAGTCACTACGTAAGTCTAGACTTAAAGCTGTAAAAAGGCGAATGCGGAGCGGCATCCACGCACTCCTCCTGGACGTGAAGCGCGGCAGGCGGACCTAGATTAGTTTAGAAGACACTGTTTAGACGACGAGCGTATCGCTGCGATCGCTCGCCAGAGATTTAGATGTAGGCGTTCGA 158 22077776 0.999910226 36 151 1006 0.948979592 1.491361694 0.295918367 0.189873418 0.346938776 158 5 5 186 2R:22077680-22077961 7 GlcT-1 FBtr0071755 22077671 22079381 AGTATTA 7mer-A1 dme-miR-8-3p 2R + 22077613 22077877 stop_codon GlcT-1 FlyBase G13885.1 GGAACAACGGGGGACACGCTGATCTGCACGGGCGCCAAACAGCGACTGCTGGTGTCGTAGCACCTAATAGTTAAGTTTGTTATTTTGTACTTGTGAGCAAACGAACTCAGCGGACTGCAAGCGACTGGCGGGCGGCGTCTAGCGTCTGGTAGTAGTATTATTAGCTGAACCTTAGTCACTACGTAAGTCTAGACTTAAAGCTGTAAAAAGGCGAATGCGGAGCGGCATCCACGCACTCCTCCTGGACGTGAAGCGCGGCAGGCGG 87 22077776 0.970258852 29 81 467 0.928 1.763427994 0.36 0.298850575 0.512 87 8 1 116 2R:22077613-22077877 7 32.5 1086 FBgn0067102 306.5833333 10.92333333 16.72333333 0.106007067 2.97528227 1.943392466 -10 -10 -10 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2R 22085376 22085382 + 2R_22085376_22085382_+ 0.823330584 0.809287257 0.81630892 0.009930113 Synj FBtr0071757|FBtr0308239|FBtr0071756 22084902|22084902|22084902 22085767|22085767|22085421 2R + 22085362 22085397 3'utr Synj FlyBase G18263.1 AAATTATAGCCGTACTAGTCAAATTATGAAGTAAAG 10 22085373 0.757413683 4 10 64 1 1.146128036 0.071428571 0.3 0.5 10 0 0 14 2R:22085362-22085397 7 Synj FBtr0071757|FBtr0308239|FBtr0071756 22084902|22084902|22084902 22085767|22085767|22085421 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R + 22085306 22085386 3'utr Synj FlyBase G13903.1 TGAAGTATATGGGCGACAAAGTATTACACTAATCTGCATAAATGTAATGTTTAAATAAATTATAGCCGTACTAGTCAAATT 9 22085367 0.976053773 7 8 51 0.8 1.079181246 0 0.444444444 0.666666667 9 3 0 12 2R:22085306-22085386 7 7.5 1087 FBgn0034691 628.3666667 16.23 24.76333333 0.011935706 0.462107209 0.302867142 3 9 6 0.2 dme-miR-282-5p 7mer-A1 GAGGCTA 2R 22085548 22085554 + 2R_22085548_22085554_+ 0.822397251 0.822419698 0.822408475 1.58E-05 Synj FBtr0071757|FBtr0308239 22084902|22084902 22085767|22085767 2R + 22085535 22085567 3'utr Synj FlyBase G18265.1 ATTCCGTCAATTTGAGGCTACATCCGGATTTCT 8 22085546 0.734100956 3 8 51 1 1 0 0.125 0.3 8 0 0 10 2R:22085535-22085567 7 Synj FBtr0071757|FBtr0308239 22084902|22084902 22085767|22085767 GAGGCTA 7mer-A1 dme-miR-282-5p 2R + 22085519 22085563 3'utr Synj FlyBase G13904.1 GTTAAACTATCGTTGTATTCCGTCAATTTGAGGCTACATCCGGAT 13 22085546 0.96545828 4 12 85 1 1.255272505 0.111111111 0.307692308 0.5 13 0 0 18 2R:22085519-22085563 7 9.5 1088 FBgn0034691 628.3666667 16.23 24.76333333 0.015118561 0.585335798 0.383631714 2 2 2 0.2 dme-miR-283-5p 7mer-A1 GATATTA 2R 22107934 22107940 - 2R_22107934_22107940_- 0.782911796 0.78097082 0.781941308 0.001372494 Vrp1 FBtr0302295|FBtr0071792|FBtr0071796|FBtr0071791|FBtr0071795|FBtr0071793|FBtr0302298|FBtr0071794|FBtr0342980 22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579 22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477 2R - 22107910 22107970 3'utr Vrp1 FlyBase G25635.1 AAGGGAAGGACTATGGAAGCTTCCCCTCGCGATATTACCACTAAGCACACACAATATTATT 36 22107936 0.972761253 7 31 175 0.895833333 0.934498451 0.229166667 0.305555556 0.479166667 36 1 4 43 2R:22107910-22107970 7 Vrp1 FBtr0071793|FBtr0302298|FBtr0071794|FBtr0342980|FBtr0302295|FBtr0071796|FBtr0071792|FBtr0071791|FBtr0071795 22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579 22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477 GATATTA 7mer-A1 dme-miR-283-5p 2R - 22107924 22107987 3'utr Vrp1 FlyBase G19387.1 ATTTTGTTACATTTCAAAAGGGAAGGACTATGGAAGCTTCCCCTCGCGATATTACCACTAAGCA 31 22107936 0.842584372 5 23 172 0.790697674 0.753327667 0.465116279 0.290322581 0.488372093 31 4 5 34 2R:22107924-22107987 7 29 1089 FBgn0243516 610.6533333 20.62333333 31.73 0.04749012 1.406174236 0.913961551 -4 -4 -4 0.2 dme-miR-8-3p 6mer3-8 CAGTAT 2R 22108229 22108234 - 2R_22108229_22108234_- 0.989907966 0.999786099 0.994847033 0.006984871 Vrp1 FBtr0302295|FBtr0071792|FBtr0071796|FBtr0071791|FBtr0071795|FBtr0071793|FBtr0302298|FBtr0071794|FBtr0342980 22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579 22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477 2R - 22108163 22108262 3'utr Vrp1 FlyBase G25637.1 AATTTTAATTTTAAAAGTGTATTACTACCAGTATAGATTATTATTGTATAGGAAGGGAAAGCCCAGGCTTACAATCCACAGCACACACATATATATGTTA 13 22108231 0.971263209 10 13 79 1 1.146128036 0.071428571 0.076923077 0.142857143 13 0 0 14 2R:22108163-22108262 6 Vrp1 FBtr0071793|FBtr0302298|FBtr0071794|FBtr0342980|FBtr0302295|FBtr0071796|FBtr0071792|FBtr0071791|FBtr0071795 22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579 22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477 CAGTAT 6mer3-8 dme-miR-8-3p 2R - 22108191 22108254 3'utr Vrp1 FlyBase G19389.1 TTTTAAAAGTGTATTACTACCAGTATAGATTATTATTGTATAGGAAGGGAAAGCCCAGGCTTAC 8 22108223 0.993185206 5 6 72 0.846153846 1.041392685 0.076923077 0.375 0.615384615 8 2 0 11 2R:22108191-22108254 6 6 1090 FBgn0243516 610.6533333 20.62333333 31.73 0.009825542 0.290932601 0.189095493 -3 -11 -7 0.2 dme-miR-970-3p 6mer2-7 CTTATG 2R 22217220 22217225 + 2R_22217220_22217225_+ 0.629834573 0.773075212 0.701454892 0.1012864 ari-2 FBtr0071774 22216391 22217264 2R + 22217100 22217248 3'utr ari-2 FlyBase G18327.1 AAGAACGAAGATAGATACTCCCCGTCCCCGATCCCGTTCCTTTTGATTCTCACTCGATTCTCGATTAACTTTGTAAGCTGAATCATAAATTATATTCTAGGATTACGCTATGTATGTATGCTTATGCGACTGAATTTGAATTAAATTTA 101 22217223 0.900660744 28 97 888 0.941176471 1.748188027 0.201680672 0.148514851 0.277310924 101 6 1 112 2R:22217100-22217248 6 ari-2 FBtr0071774 22216391 22217264 CTTATG 6mer2-7 dme-miR-970-3p 2R + 22217167 22217248 3'utr ari-2 FlyBase G13951.2 ACTTTGTAAGCTGAATCATAAATTATATTCTAGGATTACGCTATGTATGTATGCTTATGCGACTGAATTTGAATTAAATTTA 39 22217222 0.987367256 13 36 328 0.9375 1.77815125 0.28125 0.461538462 0.671875 39 4 0 60 2R:22217167-22217248 6 46 1091 FBgn0025186 276.3333333 11.22 17.22333333 0.166465621 4.099821747 2.670795433 -3 -2 -2.5 0.2 dme-miR-11-3p 7mer-m1 TGTGATG 2R 22298338 22298344 - 2R_22298338_22298344_- 0.53559203 0.53557942 0.535585725 8.91E-06 wdp FBtr0071851|FBtr0071852|FBtr0071849|FBtr0071850|FBtr0342984 22298212|22298212|22298212|22298212|22298212 22298905|22298905|22298905|22298905|22298905 2R - 22298329 22298440 3'utr wdp FlyBase G25682.1 TGAATTCAGTCGTCGAGTGCAAAATATCAATGAGCCGGGGAAAGCGGAAAGGAGTTAACTCTTTTGCATGATAAATGCTATCAATCTGCATCTGCATGTGATGTTCACACCA 19 22298353 0.995783327 9 19 133 1 1.342422681 0.090909091 0.157894737 0.272727273 19 0 0 22 2R:22298329-22298440 7 wdp FBtr0071850|FBtr0342984|FBtr0071852|FBtr0071849|FBtr0071851 22298212|22298212|22298212|22298212|22298212 22298905|22298905|22298905|22298905|22298905 TGTGATG 7mer-m1 dme-miR-11-3p 2R - 22298329 22298410 3'utr wdp FlyBase G19428.1 TGAGCCGGGGAAAGCGGAAAGGAGTTAACTCTTTTGCATGATAAATGCTATCAATCTGCATCTGCATGTGATGTTCACACCA 12 22298351 0.980695754 7 11 72 0.916666667 1.342422681 0.166666667 0.75 0.875 12 2 0 22 2R:22298329-22298410 7 8 1092 FBgn0034718 26.33333333 1.036666667 1.556666667 0.303797468 7.717041801 5.139186296 9 7 8 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2R 22298467 22298473 - 2R_22298467_22298473_- 0.652355139 0.607714622 0.63003488 0.0315656 wdp FBtr0071851|FBtr0071852|FBtr0071849|FBtr0071850|FBtr0342984 22298212|22298212|22298212|22298212|22298212 22298905|22298905|22298905|22298905|22298905 2R - 22298453 22298499 3'utr wdp FlyBase G25683.1 ACTCCTAAGCGTAAATCTAGTTTAATACCAAAGTTAAAAAAATATAT 77 22298474 0.784598154 4 74 530 0.943820225 1.447158031 0.123595506 0.142857143 0.258426966 77 3 2 84 2R:22298453-22298499 7 wdp FBtr0071850|FBtr0342984|FBtr0071852|FBtr0071849|FBtr0071851 22298212|22298212|22298212|22298212|22298212 22298905|22298905|22298905|22298905|22298905 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 22298443 22298493 3'utr wdp FlyBase G19429.1 AAGCGTAAATCTAGTTTAATACCAAAGTTAAAAAAATATATGCGTTTAAAC 31 22298466 0.952245437 4 30 190 0.977272727 1.633468456 0.068181818 0.290322581 0.5 31 1 0 43 2R:22298443-22298493 7 54 1093 FBgn0034718 26.33333333 1.036666667 1.556666667 2.050632911 52.09003215 34.68950749 1 -7 -3 0.2 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2R 22328788 22328793 + 2R_22328788_22328793_+ 0.99391376 0.99553144 0.9947226 0.001143816 Gp150 FBtr0071815|FBtr0071813|FBtr0342986|FBtr0342985|FBtr0071816|FBtr0071814 22328523|22328523|22328523|22328523|22328523|22328523 22329416|22329416|22329416|22329416|22329416|22329416 2R + 22328617 22328848 3'utr Gp150 FlyBase G18349.2 AAAGTGGAAAATCACATCAGACAATTGACTAAACACAAGCACAAGAATGTAAGAAACAGGAGGAGGAGCAGTAGGTGGCAGTTAAAAGTATTAGCGAAAGTGCGAGGAAACAAAGCAACAACTAAAAAATACTTGAATCCAAATAAGAGATTGAAAGAGAGAGAATAAATCTTTGACAAAATCCTTTATCCTTGAAATATCCTGTACCATCAAATACTGTTAAGACCAGTCA 339 22328789 0.975198585 24 318 1705 0.945595855 1.717194824 0.098445596 0.109144543 0.21761658 339 15 6 365 2R:22328617-22328848 6 Gp150 FBtr0071814|FBtr0071816|FBtr0342985|FBtr0342986|FBtr0071813|FBtr0071815 22328523|22328523|22328523|22328523|22328523|22328523 22329416|22329416|22329416|22329416|22329416|22329416 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2R + 22328615 22328813 3'utr Gp150 FlyBase G13968.2 AAAAAGTGGAAAATCACATCAGACAATTGACTAAACACAAGCACAAGAATGTAAGAAACAGGAGGAGGAGCAGTAGGTGGCAGTTAAAAGTATTAGCGAAAGTGCGAGGAAACAAAGCAACAACTAAAAAATACTTGAATCCAAATAAGAGATTGAAAGAGAGAGAATAAATCTTTGACAAAATCCTTTATCCTTGAAA 184 22328788 0.973954171 24 168 822 0.928057554 1.566521666 0.133093525 0.375 0.586330935 184 14 6 258 2R:22328615-22328813 6 147 1094 FBgn0013272 4600.843333 132.9433333 202.8033333 0.031950664 1.105734273 0.724840157 -1 0 -0.5 0.2 dme-miR-33-5p 6mer3-8 CAATGC 2R 22378402 22378407 + 2R_22378402_22378407_+ 0.926678119 0.999332761 0.96300544 0.051374631 Rtf1 FBtr0342988 22377752 22378484 2R + 22378343 22378467 3'utr Rtf1 FlyBase G18367.1 ATTGAAAGGGTTATATAAGACTCATTCAAGCGAGTATGTATCCGTTGGTTGTAACCGTTCAATGCTGTATTAGATTAAGGCAAAATTCATCAGTTGTAGCAACAGCTTTCATATACTTAAATATA 34 22378406 0.982121753 17 33 259 0.97826087 1.653212514 0.282608696 0.264705882 0.456521739 34 1 0 45 2R:22378343-22378467 6 Rtf1 FBtr0342988 22377752 22378484 CAATGC 6mer3-8 dme-miR-33-5p 2R + 22378378 22378464 3'utr Rtf1 FlyBase G13981.1 ATGTATCCGTTGGTTGTAACCGTTCAATGCTGTATTAGATTAAGGCAAAATTCATCAGTTGTAGCAACAGCTTTCATATACTTAAAT 16 22378405 0.912420192 8 16 124 1 1.301029996 0.15 0.25 0.4 16 0 0 20 2R:22378378-22378464 6 12.5 1095 FBgn0034722 664.7666667 27.26666667 41.77666667 0.01880359 0.458435208 0.299210085 -4 -3 -3.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 22425950 22425955 - 2R_22425950_22425955_- 0.899945119 0.996879264 0.948412191 0.06854283 CG10344 FBtr0071840|FBtr0071840|FBtr0071840|FBtr0071841|FBtr0071841|FBtr0071841 22425731|22425731|22425731|22425731|22425731|22425731 22426203|22426203|22426203|22426021|22426021|22426021 2R - 22425905 22426006 3'utr CG10344 FlyBase G25720.1 AGGATAAATATCTGCTGTGCAGTTCCTACCTGGGGATCCCGTAAATGACTACTGTGACTTTGGCAACCTCTGGCTGGTTAAATGTTAGTCTTAAGATAGTGA 43 22425947 0.979602929 14 41 285 0.961538462 1.397940009 0.096153846 0.139534884 0.288461538 43 1 1 50 2R:22425905-22426006 6 CG10344 FBtr0071841|FBtr0071841|FBtr0071841|FBtr0071840|FBtr0071840|FBtr0071840 22425731|22425731|22425731|22425731|22425731|22425731 22426021|22426021|22426021|22426203|22426203|22426203 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 22425905 22425998 3'utr CG10344 FlyBase G19456.1 TATCTGCTGTGCAGTTCCTACCTGGGGATCCCGTAAATGACTACTGTGACTTTGGCAACCTCTGGCTGGTTAAATGTTAGTCTTAAGATAGTGA 29 22425948 0.983546925 9 27 212 0.930232558 1.602059991 0.046511628 0.379310345 0.581395349 29 3 0 40 2R:22425905-22425998 6 23.5 1096 FBgn0034729 69.31 7.356666667 11.47666667 0.339056413 3.194381513 2.047632878 -8 -7 -7.5 0.2 dme-miR-999-3p 8mer-A1 AGTTAACA 2R 22496708 22496715 - 2R_22496708_22496715_- 0.643926228 0.64337889 0.643652559 0.000387 px FBtr0331941|FBtr0112820|FBtr0071838 22496502|22496502|22496502 22496802|22496802|22496802 2R - 22496680 22496739 3'utr px FlyBase G25726.1 TGAAAGTCGCATCGGATCGGAACTAGTTAACATCTACCTTCAGTAACATTATACTAAGCG 18 22496715 0.692980713 8 16 126 0.9 0.954242509 0.1 0.111111111 0.2 18 1 1 18 2R:22496680-22496739 8 px FBtr0112820|FBtr0071838|FBtr0331941 22496502|22496502|22496502 22496802|22496802|22496802 AGTTAACA 8mer-A1 dme-miR-999-3p 2R - 22496687 22496739 3'utr px FlyBase G19460.1 TGAAAGTCGCATCGGATCGGAACTAGTTAACATCTACCTTCAGTAACATTATA 11 22496715 0.773194885 5 11 68 1 1.278753601 0.368421053 0.454545455 0.684210526 11 0 0 19 2R:22496687-22496739 8 13.5 1097 FBgn0003175 880.3466667 16.72333333 25.61666667 0.015334868 0.807255332 0.527000651 0 0 0 0.2 dme-miR-305-5p 6mer2-7 GTACAA 2R 22563548 22563553 - 2R_22563548_22563553_- 0.744254044 0.827702486 0.785978265 0.059007 dnr1 FBtr0071837|FBtr0330229 22563509|22563150 22564119|22564059 2R - 22563535 22563576 3'utr dnr1 FlyBase G25744.1 CTTATACGATGTAGCCCTTGAATGTACAACATAGTTACTTAC 6 22563554 0.861688499 3 6 42 1 0.77815125 0.166666667 0 0 6 0 0 6 2R:22563535-22563576 6 dnr1 FBtr0071837|FBtr0330229 22563509|22563150 22564119|22564059 GTACAA 6mer2-7 dme-miR-305-5p 2R - 22563534 22563577 3'utr dnr1 FlyBase G19472.1 CCTTATACGATGTAGCCCTTGAATGTACAACATAGTTACTTACT 8 22563555 0.84610267 3 8 54 1 1 0.3 0.25 0.4 8 0 0 10 2R:22563534-22563577 6 6 1098 FBgn0260866 45.33333333 1.52 2.263333333 0.132352941 3.947368421 2.65095729 1 2 1.5 0.2 dme-miR-1008-3p 7mer-A1 GCTGTGA 2R 22600273 22600279 + 2R_22600273_22600279_+ 0.808573462 0.809609712 0.809091587 0.000732704 CG4269 FBtr0343001|FBtr0071854|FBtr0343000 22600206|22600206|22600206 22600695|22600336|22600336 2R + 22600252 22600305 3'utr CG4269 FlyBase G18424.1 TTCGCGCTCCTGCATGGATTGGCTGTGATAAACCCACTGTATTTATTTAAATTA 252 22600271 0.767058443 10 232 1885 0.927007299 1.404833717 0.00729927 0.079365079 0.153284672 252 11 9 254 2R:22600252-22600305 7 CG4269 FBtr0071854|FBtr0343000|FBtr0343001 22600206|22600206|22600206 22600336|22600336|22600695 GCTGTGA 7mer-A1 dme-miR-1008-3p 2R + 22600252 22600306 3'utr CG4269 FlyBase G14017.1 TTCGCGCTCCTGCATGGATTGGCTGTGATAAACCCACTGTATTTATTTAAATTAT 137 22600271 0.984321713 8 121 972 0.868932039 1.298610522 0.038834951 0.350364964 0.567961165 137 19 8 179 2R:22600252-22600306 7 192.5 1099 FBgn0034741 15.34666667 2.056666667 3.076666667 12.54344049 93.59805511 62.56771398 2 2 2 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 22672188 22672195 + 2R_22672188_22672195_+ 0.541411182 0.576361453 0.558886318 0.024713594 RYBP FBtr0071868|FBtr0345500 22671942|22671942 22673212|22673212 2R + 22672116 22672213 3'utr RYBP FlyBase G18451.1 AAGCCCCCACTAGTTCATGACTTCCAGCCCAGGCCAAGATGGCAAAGCAAAGCGAAGCGACGGCGAGTCGATTGCATTTACACGACGCTCTCCAAATC 80 22672187 0.918998936 3 76 381 0.96039604 1.50965048 0.257425743 0.225 0.386138614 80 2 2 97 2R:22672116-22672213 8 RYBP FBtr0071868|FBtr0345500 22671942|22671942 22673212|22673212 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 22672165 22672215 3'utr RYBP FlyBase G14033.1 AAGCGAAGCGACGGCGAGTCGATTGCATTTACACGACGCTCTCCAAATCCC 24 22672187 0.97069128 2 23 133 0.95 1.579783597 0.225 0.458333333 0.675 24 2 0 38 2R:22672165-22672215 8 35 1100 FBgn0034763 242.2733333 14.13333333 21.79333333 0.144464929 2.476415094 1.605995717 1 1 1 0.2 dme-miR-14-3p 8mer-A1 AAGACTGA 2R 22672600 22672607 + 2R_22672600_22672607_+ 0.642410598 0.643565457 0.642988028 0.000816638 RYBP FBtr0071868|FBtr0345500 22671942|22671942 22673212|22673212 2R + 22672578 22672695 3'utr RYBP FlyBase G18456.1 TAATTTTAATTTGTTTGTATACAAGACTGATTAAGCGTTACCAACCAGATATAGAGAGGTCCGCACACGCACCCAGCCCGAATCCGATTTTCCTTTTGGTTTACACCCGAGATAGCCT 32 22672609 0.984839309 11 32 254 1 1.556302501 0.222222222 0.125 0.222222222 32 0 0 36 2R:22672578-22672695 8 RYBP FBtr0071868|FBtr0345500 22671942|22671942 22673212|22673212 AAGACTGA 8mer-A1 dme-miR-14-3p 2R + 22672542 22672629 3'utr RYBP FlyBase G14037.1 GAAGAGAGCCACGTAGCTTGGTTGTAGACAATTTGCTAATTTTAATTTGTTTGTATACAAGACTGATTAAGCGTTACCAACCAGATAT 22 22672593 0.991646961 9 17 188 0.806451613 0.795880017 0.096774194 0.318181818 0.516129032 22 3 3 25 2R:22672542-22672629 8 24.5 1101 FBgn0034763 242.2733333 14.13333333 21.79333333 0.101125451 1.733490566 1.124197002 -9 7 -1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 22685402 22685408 - 2R_22685402_22685408_- 0.79825099 0.793979113 0.796115052 0.003020689 Ppa FBtr0343014|FBtr0343014|FBtr0343014 22684953|22684953|22684953 22687104|22687104|22687104 2R - 22685364 22685457 3'utr Ppa FlyBase G25792.1 AGAGAAGGTAACGATTGAAAAGAATACGCGAATTAATTCTTTTTTCTATTGTGATATAAAATGTATTGTATAAAAAAGAACACATAAGCAAGCA 60 22685409 0.993571404 13 51 628 0.844155844 0.967815317 0.064935065 0.233333333 0.402597403 60 6 6 65 2R:22685364-22685457 7 Ppa FBtr0343014|FBtr0343014|FBtr0343014 22684953|22684953|22684953 22687104|22687104|22687104 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 22685361 22685457 3'utr Ppa FlyBase G19514.1 AGAGAAGGTAACGATTGAAAAGAATACGCGAATTAATTCTTTTTTCTATTGTGATATAAAATGTATTGTATAAAAAAGAACACATAAGCAAGCAGCA 49 22685409 0.984489713 12 45 482 0.905405405 1.047923552 0.094594595 0.408163265 0.608108108 49 2 5 67 2R:22685361-22685457 7 41.5 1102 FBgn0020257 1130.93 34.32 53.00666667 0.036695463 1.209207459 0.782920387 1 1 1 0.2 dme-miR-34-5p 6mer2-7 ACTGCC 2R 22692827 22692832 - 2R_22692827_22692832_- 0.967337262 0.962351026 0.964844144 0.003525847 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 2R - 22692787 22692854 3'utr robo FlyBase G25801.1 GAAACCAACTTGCTTGAGTTGAACTGCCCTTCCGTAGCCATATACATATAGAGAAAGCATAGTTGGGT 124 22692825 0.762779106 9 123 868 0.993421053 1.877946952 0.25 0.185483871 0.335526316 124 0 1 151 2R:22692787-22692854 6 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 ACTGCC 6mer2-7 dme-miR-34-5p 2R - 22692766 22692854 3'utr robo FlyBase G19522.1 GAAACCAACTTGCTTGAGTTGAACTGCCCTTCCGTAGCCATATACATATAGAGAAAGCATAGTTGGGTCTGGGTTTTAATAATTAGCAA 83 22692825 0.977956071 10 82 558 0.991735537 1.77815125 0.214876033 0.361445783 0.561983471 83 0 1 120 2R:22692766-22692854 6 96.5 1103 FBgn0005631 940.4766667 16.89666667 25.92333333 0.102607543 5.711185638 3.722515109 -7 -7 -7 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2R 22693464 22693471 - 2R_22693464_22693471_- 0.580136002 0.572959264 0.576547633 0.005074693 robo FBtr0343013|FBtr0343013|FBtr0343013|FBtr0071922|FBtr0071922|FBtr0071922 22692522|22692522|22692522|22692522|22692522|22692522 22694552|22694552|22694552|22694552|22694552|22694552 2R - 22693422 22693574 3'utr robo FlyBase G25805.1 CGAACCAACCCCAGTTGTCCGTTCCGTTGTCCTGTCCCTGTGCAGATCCCTCCAAGACACAATGTTTTCTACAATCTTGCATTTTGAAAAGTCTAAAATGTACCTGTGATATAACCCCATTATACATTATAGTATTTTAATAATTTTTATATT 358 22693475 0.98091123 24 335 2417 0.934831461 2.619093331 0.139325843 0.187150838 0.346067416 358 29 0 416 2R:22693422-22693574 8 robo FBtr0343013|FBtr0343013|FBtr0343013|FBtr0071922|FBtr0071922|FBtr0071922 22692522|22692522|22692522|22692522|22692522|22692522 22694552|22694552|22694552|22694552|22694552|22694552 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 22693434 22693572 3'utr robo FlyBase G19525.1 AACCAACCCCAGTTGTCCGTTCCGTTGTCCTGTCCCTGTGCAGATCCCTCCAAGACACAATGTTTTCTACAATCTTGCATTTTGAAAAGTCTAAAATGTACCTGTGATATAACCCCATTATACATTATAGTATTTTAAT 205 22693476 0.980634727 17 190 1353 0.918918919 1.957447649 0.094594595 0.326829268 0.533783784 205 22 2 272 2R:22693434-22693572 8 246.5 1104 FBgn0005631 940.4766667 16.89666667 25.92333333 0.262101133 14.58867627 9.508808024 4 5 4.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2R 22693884 22693890 - 2R_22693884_22693890_- 0.795995244 0.81919474 0.807594992 0.016404524 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 2R - 22693859 22693950 3'utr robo FlyBase G25807.1 TGTAGTTAGAACCAAAGTACACCATTTGTACAGCATGTTTTGGGGGCTTTTGAATCGGTCCTAGTCAATAGGCTTGATAGCGATACAATACG 46 22693882 0.980837236 9 43 315 0.967213115 1.770852012 0.229508197 0.260869565 0.442622951 46 2 0 59 2R:22693859-22693950 7 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R - 22693870 22693925 3'utr robo FlyBase G19528.1 TTGTACAGCATGTTTTGGGGGCTTTTGAATCGGTCCTAGTCAATAGGCTTGATAGC 19 22693910 0.743677599 7 18 163 0.961538462 1.096910013 0.076923077 0.315789474 0.5 19 0 1 25 2R:22693870-22693925 7 21.5 1105 FBgn0005631 940.4766667 16.89666667 25.92333333 0.022860748 1.272440324 0.829368651 -8 20 6 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 22694136 22694143 - 2R_22694136_22694143_- 0.498804568 0.498976853 0.49889071 0.000121834 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 2R - 22694112 22694297 3'utr robo FlyBase G25808.1 ACTTGTCACAATCATGGGGGCATTGTGCAGCTTTAGCAATTACGAATTTTTCCATTATCACATCTACCAGCGTAGAGACTCATAGACAGGCACAGTGCCCCTTCCCCATCCATGCACCACAGAAATGTTTCCCCAATGGGAAACGAGAACCTTTGTACTTAAGAGACGCGAGTGCTGTACGATAGA 368 22694144 0.961475004 18 354 1902 0.954545455 1.998912904 0.277511962 0.116847826 0.222488038 368 16 3 399 2R:22694112-22694297 8 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 GTACTTAA 8mer-A1 dme-miR-252-5p 2R - 22694116 22694168 3'utr robo FlyBase G19530.1 TCCCCAATGGGAAACGAGAACCTTTGTACTTAAGAGACGCGAGTGCTGTACGA 144 22694144 0.648028922 7 141 760 0.957345972 2.305351369 0.383886256 0.354166667 0.559241706 144 9 0 202 2R:22694116-22694168 8 188.5 1106 FBgn0005631 940.4766667 16.89666667 25.92333333 0.200430278 11.15604656 7.27144143 1 1 1 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 22694494 22694500 - 2R_22694494_22694500_- 0.659907488 0.66020342 0.660055454 0.000209233 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 2R - 22694421 22694528 3'utr robo FlyBase G25809.1 AATAGGGGGATTAGGATTAAAGATAGCATCTAGTCTAACTCTTCATTCATATCGAACTGGAAATCAGTCTAGGAACTGAGTGAACTCAAAGTTTCTGCATCAGTTATC 53 22694500 0.981465663 10 51 372 0.951612903 1.770852012 0.112903226 0.150943396 0.274193548 53 3 0 59 2R:22694421-22694528 7 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R - 22694467 22694516 3'utr robo FlyBase G19532.1 AGGATTAAAGATAGCATCTAGTCTAACTCTTCATTCATATCGAACTGGAA 22 22694500 0.721435469 4 17 127 0.793103448 1.06069784 0.068965517 0.227272727 0.413793103 22 5 1 23 2R:22694467-22694516 7 32 1107 FBgn0005631 940.4766667 16.89666667 25.92333333 0.034025299 1.893864668 1.234409155 0 0 0 0.2 dme-miR-92b-3p 8mer-m1 GTGCAATT 2R 22801729 22801736 + 2R_22801729_22801736_+ 0.596695271 0.448257747 0.522476509 0.104961234 blw FBtr0071883 22801691 22802180 2R + 22801691 22801754 stop_codon blw FlyBase G18466.1 AAGCATCAGCAGCAAACGAAGAATAGGAGTAGCGGTGCGTGCAATTAACATCATAGATGGCTCG 21 22801744 0.753714101 6 20 116 0.962962963 1.414973348 0.37037037 0.238095238 0.407407407 21 1 0 26 2R:22801691-22801754 8 blw FBtr0071883 22801691 22802180 GTGCAATT 8mer-m1 dme-miR-92b-3p 2R + 22801709 22801752 3'utr blw FlyBase G14049.1 AAGAATAGGAGTAGCGGTGCGTGCAATTAACATCATAGATGGCT 12 22801744 0.91427173 4 11 68 0.944444444 1.230448921 0.055555556 0.333333333 0.555555556 12 1 0 17 2R:22801709-22801752 8 15 1108 FBgn0011211 3676.656667 198.3566667 303.6133333 0.004079794 0.075621355 0.049404945 -15 -15 -15 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2R 22804138 22804143 - 2R_22804138_22804143_- 0.947997517 0.961666538 0.954832028 0.009665443 CycB FBtr0309858|FBtr0071911|FBtr0071913|FBtr0071914 22803519|22803519|22803519|22803519 22804293|22804293|22804293|22804293 2R - 22804123 22804179 3'utr CycB FlyBase G25819.1 GCGTATAGTTACCGTAGTCGCATTGCCAACTATCTTTACCTGCATCACCCATCCCTA 51 22804145 0.653371247 8 50 382 0.984615385 1.505149978 0.061538462 0.196078431 0.369230769 51 0 1 64 2R:22804123-22804179 6 CycB FBtr0309858|FBtr0071911|FBtr0071913|FBtr0071914 22803519|22803519|22803519|22803519 22804293|22804293|22804293|22804293 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2R - 22804124 22804167 3'utr CycB FlyBase G19540.1 CGTAGTCGCATTGCCAACTATCTTTACCTGCATCACCCATCCCT 32 22804145 0.632276229 5 27 222 0.844444444 0.880813592 0.088888889 0.34375 0.533333333 32 3 4 38 2R:22804124-22804167 6 38 1109 FBgn0000405 1807.483333 83.51333333 128.11 0.021023707 0.455017163 0.296620092 2 2 2 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 2R 22931818 22931824 + 2R_22931818_22931824_+ 0.521074104 0.518136399 0.519605251 0.002077268 CG42678 FBtr0345078|FBtr0302769|FBtr0302773|FBtr0345077|FBtr0302768|FBtr0344190|FBtr0302772|FBtr0345079|FBtr0302770|FBtr0302771 22931633|22931278|22931633|22931533|22929536|22931533|22931278|22931633|22931278|22931278 22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044 2R + 22931806 22931843 3'utr CG42678 FlyBase G18491.1 GTGTACTTTGTTTGTGATTCTATTAGAGCTCCGGGCGC 17 22931816 0.618590426 8 16 176 0.818181818 1.255272505 0.181818182 0.176470588 0.363636364 17 4 0 18 2R:22931806-22931843 7 CG42678 FBtr0345077|FBtr0302773|FBtr0302769|FBtr0345078|FBtr0302770|FBtr0302771|FBtr0302772|FBtr0345079|FBtr0344190|FBtr0302768 22931533|22931633|22931278|22931633|22931278|22931278|22931278|22931633|22931533|22929536 22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044 TGTGATT 7mer-m1 dme-miR-308-3p 2R + 22931806 22931826 3'utr CG42678 FlyBase G14067.1 GTGTACTTTGTTTGTGATTCT 5 22931817 0.657456855 3 5 55 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2R:22931806-22931826 7 10.5 1110 FBgn0261564 564.6666667 33.59333333 51.19333333 0.018595041 0.312562016 0.205104831 2 1 1.5 0.2 dme-miR-1012-3p 6mer2-7 TGACTA 2R 22931877 22931882 + 2R_22931877_22931882_+ 0.878389167 0.999987984 0.939188576 0.085983336 CG42678 FBtr0345078|FBtr0302769|FBtr0302773|FBtr0345077|FBtr0302768|FBtr0344190|FBtr0302772|FBtr0345079|FBtr0302770|FBtr0302771 22931633|22931278|22931633|22931533|22929536|22931533|22931278|22931633|22931278|22931278 22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044 2R + 22931847 22931898 3'utr CG42678 FlyBase G18492.1 TCGTCCTGGTTGCCACTGGTACTCATTTCGTGACTAGTTTAGCGTTAAGCGA 7 22931872 0.988352294 3 7 64 1 0.84509804 0 0 0 7 0 0 7 2R:22931847-22931898 6 CG42678 FBtr0345077|FBtr0302773|FBtr0302769|FBtr0345078|FBtr0302770|FBtr0302771|FBtr0302772|FBtr0345079|FBtr0344190|FBtr0302768 22931533|22931633|22931278|22931633|22931278|22931278|22931278|22931633|22931533|22929536 22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044 TGACTA 6mer2-7 dme-miR-1012-3p 2R + 22931846 22931897 3'utr CG42678 FlyBase G14068.1 TTCGTCCTGGTTGCCACTGGTACTCATTTCGTGACTAGTTTAGCGTTAAGCG 7 22931872 0.987490085 5 6 55 1 1.079181246 0.333333333 0.571428571 0.75 7 0 0 12 2R:22931846-22931897 6 5.5 1111 FBgn0261564 564.6666667 33.59333333 51.19333333 0.00974026 0.163722961 0.107435864 5 5 5 0.2 dme-miR-308-3p 8mer-m1 CTGTGATT 2R 22934614 22934621 - 2R_22934614_22934621_- 0.38556063 0.383806521 0.384683576 0.001240336 CG3800 FBtr0071994|FBtr0303464 22934567|22934567 22936014|22936014 2R - 22934560 22934651 3'utr CG3800 FlyBase G25898.1 ACGATGAAGGAAATGAAAATTCAAATATCACTGTGATTGTTTTTTAATTGTAAATTAAAATGCTGGAGCTGCTGATTTGAGACAAAAAAAAA 107 22934614 0.985027004 20 98 1119 0.906976744 1.767155866 0.046511628 0.158878505 0.302325581 107 11 1 117 2R:22934560-22934651 8 CG3800 FBtr0071994|FBtr0303464 22934567|22934567 22936014|22936014 CTGTGATT 8mer-m1 dme-miR-308-3p 2R - 22934570 22934638 3'utr CG3800 FlyBase G19600.1 TGAAAATTCAAATATCACTGTGATTGTTTTTTAATTGTAAATTAAAATGCTGGAGCTGCTGATTTGAGA 60 22934614 0.991282586 8 58 624 0.990291262 2.008600172 0.029126214 0.516666667 0.718446602 60 1 0 102 2R:22934570-22934638 8 74 1112 FBgn0034802 11327.54667 555.1 855.97 0.006532747 0.133309314 0.086451628 -7 -7 -7 0.2 dme-miR-1006-3p 7mer-A1 GAATTTA 2R 22935330 22935336 - 2R_22935330_22935336_- 0.82334804 0.823337459 0.823342749 7.42E-06 CG3800 FBtr0071994|FBtr0303464 22934567|22934567 22936014|22936014 2R - 22935271 22935378 5'utr CG3800 FlyBase G25903.1 TAATTATACCTATATGATTATATGATTATGCTGCAAGTGTTTGAATTTACTAATTACATTATAACGAATGGAATGAAACTATATAAGATTATATAAAGAAAAATACCT 26 22935338 0.986494315 16 23 195 0.892857143 1.397940009 0.178571429 0.076923077 0.142857143 26 3 0 25 2R:22935271-22935378 7 CG3800 FBtr0071994|FBtr0303464 22934567|22934567 22936014|22936014 GAATTTA 7mer-A1 dme-miR-1006-3p 2R - 22935312 22935372 5'utr CG3800 FlyBase G19604.2 TACCTATATGATTATATGATTATGCTGCAAGTGTTTGAATTTACTAATTACATTATAACGA 19 22935339 0.901070562 9 14 164 0.84375 0.954242509 0.28125 0.578947368 0.75 19 3 2 27 2R:22935312-22935372 7 12.5 1113 FBgn0034802 11327.54667 555.1 855.97 0.001103505 0.022518465 0.014603316 2 3 2.5 0.2 dme-miR-2a-2-5p 7mer-A1 GATGAGA 2R 22935431 22935437 - 2R_22935431_22935437_- 0.7783829 0.775162482 0.776772691 0.002277167 CG3800 FBtr0071994|FBtr0303464 22934567|22934567 22936014|22936014 2R - 22935405 22935548 5'utr CG3800 FlyBase G25904.1 AGAAGACGATAGCCAACGGCAGCTGTGCAGCCGAGAGAGCAGATGACACCGACGACGAGGAAGAGGATGAGGTAGAAGATGAGGAAGAAGACACGACGACCCAATTTGTAAGATGAGACTAAACCACAACAGCAACAACAAAAG 363 22935435 0.938356045 12 352 1369 0.96912114 2.309630167 0.104513064 0.14600551 0.263657957 363 12 1 408 2R:22935405-22935548 7 CG3800 FBtr0071994|FBtr0303464 22934567|22934567 22936014|22936014 GATGAGA 7mer-A1 dme-miR-2a-2-5p 2R - 22935394 22935548 5'utr CG3800 FlyBase G19605.1 AGAAGACGATAGCCAACGGCAGCTGTGCAGCCGAGAGAGCAGATGACACCGACGACGAGGAAGAGGATGAGGTAGAAGATGAGGAAGAAGACACGACGACCCAATTTGTAAGATGAGACTAAACCACAACAGCAACAACAAAAGAAATCACCAAG 241 22935435 0.930028914 11 233 846 0.971910112 2.539076099 0.070224719 0.340248963 0.553370787 241 10 0 346 2R:22935394-22935548 7 284 1114 FBgn0034802 11327.54667 555.1 855.97 0.025071625 0.511619528 0.331787329 -2 -2 -2 0.2 dme-miR-980-3p 6mer2-7 GCAGCT 2R 22938801 22938806 + 2R_22938801_22938806_+ 0.955798985 0.992903264 0.974351124 0.026236702 CG9849 FBtr0302895|FBtr0071951 22938783|22938783 22939025|22939025 2R + 22938764 22938822 stop_codon CG9849 FlyBase G18494.1 CCGCCGTGGCTGGGCTGGTGACGTGATCGGATTACATGCAGCTCAAAGGACTCGTGTGA 22 22938800 0.857419269 5 21 132 0.958333333 1.361727836 0.208333333 0.090909091 0.166666667 22 1 0 23 2R:22938764-22938822 6 CG9849 FBtr0302895|FBtr0071951 22938783|22938783 22939025|22939025 GCAGCT 6mer2-7 dme-miR-980-3p 2R + 22938779 22938822 stop_codon CG9849 FlyBase G14069.1 TGGTGACGTGATCGGATTACATGCAGCTCAAAGGACTCGTGTGA 9 22938800 0.785550638 3 9 48 1 1.322219295 0.238095238 0.777777778 0.904761905 9 0 0 21 2R:22938779-22938822 6 14.5 1115 FBgn0034803 110.3333333 14.92666667 22.72333333 0.13141994 0.971415811 0.638110606 1 1 1 0.2 dme-bantam-3p 6mer3-8 TGATCT 2R 23071694 23071699 + 2R_23071694_23071699_+ 0.999874802 0.999903059 0.999888931 2.00E-05 l(2)k09913 FBtr0071960|FBtr0343188|FBtr0343192|FBtr0071959|FBtr0343191|FBtr0071961|FBtr0343189|FBtr0343190|FBtr0071958 23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554 23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875 2R + 23071539 23071725 stop_codon l(2)k09913 FlyBase G18510.1 AGCGCGCCAAGTTGTAGGTGTCTCTAACGAGGAGCGGCTGATCAGTTCAGTGATATACATTTATTCAAGAATCAATGCGATTATGATTTTACCCTAGTTGCTAAGACCTAAAGATTAACGAGCAATGTAAAACCAATGTCCTCTTTGAATGATTATGATCTGTGTGTCTCTCGCGAGGCAGAATCTT 284 23071694 0.986472032 37 272 2343 0.964391691 2.034762106 0.228486647 0.151408451 0.284866469 284 10 2 325 2R:23071539-23071725 6 l(2)k09913 FBtr0071961|FBtr0343191|FBtr0343190|FBtr0071958|FBtr0343189|FBtr0343188|FBtr0071960|FBtr0071959|FBtr0343192 23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554 23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875 TGATCT 6mer3-8 dme-bantam-3p 2R + 23071564 23071722 3'utr l(2)k09913 FlyBase G14081.1 AACGAGGAGCGGCTGATCAGTTCAGTGATATACATTTATTCAAGAATCAATGCGATTATGATTTTACCCTAGTTGCTAAGACCTAAAGATTAACGAGCAATGTAAAACCAATGTCCTCTTTGAATGATTATGATCTGTGTGTCTCTCGCGAGGCAGAAT 168 23071694 0.893394118 23 159 1351 0.940677966 2.346352974 0.266949153 0.297619048 0.5 168 14 0 222 2R:23071564-23071722 6 112 1116 FBgn0021979 722.6 59.48666667 89.72333333 0.154995848 1.882774852 1.248281755 0 0 0 0.2 dme-miR-304-5p 6mer3-8 TGAGAT 2R 23071823 23071828 + 2R_23071823_23071828_+ 0.985326769 0.983511335 0.984419052 0.001283752 l(2)k09913 FBtr0071960|FBtr0343188|FBtr0343192|FBtr0071959|FBtr0343191|FBtr0071961|FBtr0343189|FBtr0343190|FBtr0071958 23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554 23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875 2R + 23071771 23071849 3'utr l(2)k09913 FlyBase G18511.1 TTCATCAACCGAGAGAAGAATGCACTACGCCTCTATATTGTTACATATATTTTGAGATCGCTGCAAAACAGCTAAATAA 23 23071822 0.972095263 4 23 141 1 1.431363764 0.185185185 0.130434783 0.259259259 23 0 0 27 2R:23071771-23071849 6 l(2)k09913 FBtr0071961|FBtr0343191|FBtr0343190|FBtr0071958|FBtr0343189|FBtr0343188|FBtr0071960|FBtr0071959|FBtr0343192 23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554 23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875 TGAGAT 6mer3-8 dme-miR-304-5p 2R + 23071807 23071848 3'utr l(2)k09913 FlyBase G14083.1 ATTGTTACATATATTTTGAGATCGCTGCAAAACAGCTAAATA 14 23071822 0.703581161 3 13 108 0.95 1.278753601 0 0.428571429 0.6 14 1 0 19 2R:23071807-23071848 6 13.5 1117 FBgn0021979 722.6 59.48666667 89.72333333 0.018682535 0.226941612 0.150462533 1 1 1 0.2 dme-bantam-3p 7mer-m8 TGATCTC 2R 23355188 23355194 + 2R_23355188_23355194_+ 0.530354259 0.498197411 0.514275835 0.022738362 CG30409 FBtr0072004|FBtr0305674 23354922|23354922 23355321|23355321 2R + 23355169 23355208 5'utr CG30409 FlyBase G18522.1 AAATCCCGCACCGGCGGCTTGATCTCTGTGACATTGAAGT 14 23355187 0.790699754 3 13 80 0.9375 1.176091259 0.25 0.142857143 0.25 14 1 0 15 2R:23355169-23355208 7 CG30409 FBtr0305674|FBtr0072004 23354922|23354922 23355321|23355321 TGATCTC 7mer-m8 dme-bantam-3p 2R + 23355170 23355200 5'utr CG30409 FlyBase G14091.1 AATCCCGCACCGGCGGCTTGATCTCTGTGAC 11 23355187 0.71377672 3 11 58 1 1.255272505 0.722222222 0.545454545 0.722222222 11 0 0 18 2R:23355170-23355200 7 12.5 1118 FBgn0050409 2.333333333 0.296666667 0.423333333 5.357142857 42.13483146 29.52755906 1 1 1 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 23356109 23356116 + 2R_23356109_23356116_+ 0.624813437 0.625024637 0.624919037 0.000149341 Rpi FBtr0301852|FBtr0305675 23356078|23356078 23356192|23356441 2R + 23356082 23356152 3'utr Rpi FlyBase G18526.1 CTTGGGCGGAGTTGGGGGAGCGCTTTTTGCATTTATGTTTCACCAAGTTGTTCCTTAAATTTTAGGTTTGC 41 23356108 0.74232017 10 41 406 1 1.698970004 0.08 0.195121951 0.34 41 0 0 50 2R:23356082-23356152 8 Rpi FBtr0305675 23356078 23356441 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 23356078 23356153 stop_codon Rpi FlyBase G14095.1 AGTTCTTGGGCGGAGTTGGGGGAGCGCTTTTTGCATTTATGTTTCACCAAGTTGTTCCTTAAATTTTAGGTTTGCC 41 23356108 0.736360172 10 40 419 1 1.785329835 0.098360656 0.317073171 0.540983607 41 0 0 61 2R:23356078-23356153 8 27 1119 FBgn0050410 217.7933333 24.45 37.62 0.123970737 1.104294479 0.717703349 1 1 1 0.2 dme-miR-968-5p 6mer2-7 CTACTT 2R 23371601 23371606 - 2R_23371601_23371606_- 0.732383649 0.746673393 0.739528521 0.010104414 Golgin245 FBtr0072036 23371358 23371842 2R - 23371447 23371614 3'utr Golgin245 FlyBase G25951.1 AAGTATAGCTACTTCTGTCCAAATCCACGCTAAGCACTTTTGTACATTTTGATTACGCTTTCCTTTGTTTCATTCACTTGCTTGCGCTCCATGTCCCATGTCCACGACTTACCTTAACCCCAGCCTAACCTAAGTGCAATCGTTTTGTGTATTTTAGTTGTAAGTTTA 334 23371602 0.850153201 24 329 2448 0.985185185 2.2999429 0.111111111 0.173652695 0.318518519 334 5 1 399 2R:23371447-23371614 6 Golgin245 FBtr0072036 23371358 23371842 CTACTT 6mer2-7 dme-miR-968-5p 2R - 23371485 23371615 3'utr Golgin245 FlyBase G19638.1 TAAGTATAGCTACTTCTGTCCAAATCCACGCTAAGCACTTTTGTACATTTTGATTACGCTTTCCTTTGTTTCATTCACTTGCTTGCGCTCCATGTCCCATGTCCACGACTTACCTTAACCCCAGCCTAACC 179 23371602 0.897360209 14 179 1190 1 2.456366033 0.059440559 0.430167598 0.643356643 179 0 0 286 2R:23371485-23371615 6 200 1120 FBgn0034854 1865.833333 44.14333333 67.57666667 0.10719071 4.530695462 2.95960144 -4 -4 -4 0.2 dme-miR-14-3p 6mer3-8 AAGACT 2R 23491136 23491141 + 2R_23491136_23491141_+ 0.942770257 0.682207763 0.81248901 0.184245511 CG43795 FBtr0331989 23490922 23491997 2R + 23491100 23491158 3'utr CG43795 FlyBase G18552.1 CGAAAATGTTTTATGCTTAGGCCAGTTGAATTATCAAAGACTTTACTAAATTATATTTG 21 23491143 0.984930478 9 20 163 0.962962963 1.414973348 0.185185185 0.238095238 0.407407407 21 1 0 26 2R:23491100-23491158 6 CG43795 FBtr0331989 23490922 23491997 AAGACT 6mer3-8 dme-miR-14-3p 2R + 23491096 23491157 3'utr CG43795 FlyBase G14108.1 CAATCGAAAATGTTTTATGCTTAGGCCAGTTGAATTATCAAAGACTTTACTAAATTATATTT 18 23491144 0.984776396 6 18 149 1 1.380211242 0.041666667 0.222222222 0.416666667 18 0 0 24 2R:23491096-23491157 6 17.5 1121 FBgn0264339 32.66666667 0.67 1.033333333 0.535714286 26.11940299 16.93548387 -7 -8 -7.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 23520325 23520330 - 2R_23520325_23520330_- 0.55683165 0.561073348 0.558952499 0.002999335 RabX1 FBtr0072120|FBtr0072120|FBtr0072120 23519837|23519837|23519837 23520357|23520357|23520357 2R - 23520282 23520358 stop_codon RabX1 FlyBase G25994.1 AGATCTATCAGATCCCCAGGATCCACATCTGTGAAAGAACCAATGTGATTTTAACAGAACCAGACTGCAGTTCGAAT 103 23520331 0.784510395 9 101 434 1 2.064457989 0.25 0.106796117 0.206896552 103 0 0 116 2R:23520282-23520358 6 RabX1 FBtr0072120|FBtr0072120|FBtr0072120 23519837|23519837|23519837 23520357|23520357|23520357 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 23520274 23520352 3'utr RabX1 FlyBase G19671.1 ATCAGATCCCCAGGATCCACATCTGTGAAAGAACCAATGTGATTTTAACAGAACCAGACTGCAGTTCGAATATGGGCTC 80 23520331 0.943054685 11 80 352 1 2.113943352 0.192307692 0.4375 0.653846154 80 0 0 130 2R:23520274-23520352 6 72.5 1122 FBgn0015372 359.1933333 26.49333333 40.52 0.201841163 2.736537494 1.789239882 1 1 1 0.2 dme-miR-33-5p 8mer-A1 CAATGCAA 2R 23528178 23528185 + 2R_23528178_23528185_+ 0.621226647 0.631217067 0.626221857 0.00706435 mi FBtr0072058 23527637 23528260 2R + 23528153 23528205 3'utr mi FlyBase G18577.1 TTTACTTAACTACCGCACGAGTACTCAATGCAACTGAAATTAAGCTGAAGCAA 27 23528177 0.752974174 8 26 134 0.96969697 1.505149978 0.393939394 0.185185185 0.333333333 27 1 0 32 2R:23528153-23528205 8 mi FBtr0072058 23527637 23528260 CAATGCAA 8mer-A1 dme-miR-33-5p 2R + 23528160 23528199 3'utr mi FlyBase G14126.1 AACTACCGCACGAGTACTCAATGCAACTGAAATTAAGCTG 23 23528177 0.666945338 7 22 80 0.967741935 1.477121255 0.258064516 0.304347826 0.483870968 23 1 0 30 2R:23528160-23528199 8 25 1123 FBgn0261786 586.8166667 18.49 28.43 0.042602744 1.352082207 0.879352796 1 1 1 0.2 dme-miR-33-5p 7mer-A1 AATGCAA 2R 23544848 23544854 - 2R_23544848_23544854_- 0.74760333 0.772394445 0.759998887 0.017529955 wmd FBtr0113112|FBtr0072114 23544821|23544821 23545063|23545063 2R - 23544832 23544920 3'utr wmd FlyBase G25995.1 TATTCCAACGCTGAACTCTCTCATTGGCATTAAATGATAATCACAACACACAAAACTACATTGTGAAATGCAATAGAAATAAATAACTT 42 23544860 0.838011463 8 40 220 0.963636364 1.423245874 0.127272727 0.238095238 0.418181818 42 1 1 53 2R:23544832-23544920 7 wmd FBtr0113112|FBtr0072114 23544821|23544821 23545063|23545063 AATGCAA 7mer-A1 dme-miR-33-5p 2R - 23544832 23544921 3'utr wmd FlyBase G19673.1 ATATTCCAACGCTGAACTCTCTCATTGGCATTAAATGATAATCACAACACACAAAACTACATTGTGAAATGCAATAGAAATAAATAACTT 29 23544860 0.713735031 9 29 152 1 1.681241237 0.104166667 0.448275862 0.666666667 29 0 0 48 2R:23544832-23544921 7 21 1124 FBgn0034876 541.5 41.29666667 63.21666667 0.038781163 0.508515619 0.332190878 6 6 6 0.2 dme-miR-8-3p 7mer-m8 CAGTATT 2R 23598763 23598769 + 2R_23598763_23598769_+ 0.661382268 0.660675619 0.661028944 0.000499712 apt FBtr0072069|FBtr0072067|FBtr0332926|FBtr0072068|FBtr0072066|FBtr0072070 23598526|23598526|23598526|23598526|23598526|23598526 23599526|23599526|23599526|23599526|23599526|23599526 2R + 23598741 23598784 3'utr apt FlyBase G18592.1 AGACATTCCTGGCATTGTTGATCAGTATTTGAAAGCTAGAAGCG 10 23598761 0.725171402 4 10 98 1 1 0.5 0 0 10 0 0 10 2R:23598741-23598784 7 apt FBtr0072066|FBtr0072070|FBtr0332926|FBtr0072068|FBtr0072069|FBtr0072067 23598526|23598526|23598526|23598526|23598526|23598526 23599526|23599526|23599526|23599526|23599526|23599526 CAGTATT 7mer-m8 dme-miR-8-3p 2R + 23598749 23598775 3'utr apt FlyBase G14139.1 CTGGCATTGTTGATCAGTATTTGAAAG 8 23598762 0.730993826 2 6 60 0.75 0.954242509 0.083333333 0.5 0.666666667 8 3 0 9 2R:23598749-23598775 7 9 1125 FBgn0015903 402.1966667 17.62666667 27.31666667 0.022377112 0.510590015 0.329469189 2 1 1.5 0.2 dme-miR-1003-3p 7mer-m8 ATGTGAG 2R 23679150 23679156 + 2R_23679150_23679156_+ 0.557519193 0.662314115 0.609916654 0.074101184 Pde8 FBtr0344184|FBtr0344179|FBtr0344182|FBtr0344178|FBtr0344183|FBtr0344177|FBtr0344176 23678688|23678688|23678688|23678688|23678688|23678688|23678688 23680017|23680017|23680844|23680844|23680844|23680017|23680017 2R + 23679125 23679177 3'utr Pde8 FlyBase G18601.1 ATTTCTATATATAACTATATAAACCATGTGAGTCTGTGTGTGCGTGAGTGTGT 13 23679160 0.988846229 6 10 102 0.833333333 1.176091259 0.611111111 0.307692308 0.5 13 3 0 15 2R:23679125-23679177 7 Pde8 FBtr0344182|FBtr0344178|FBtr0344183|FBtr0344176|FBtr0344177|FBtr0344184|FBtr0344179 23678688|23678688|23678688|23678688|23678688|23678688|23678688 23680844|23680844|23680844|23680017|23680017|23680017|23680017 ATGTGAG 7mer-m8 dme-miR-1003-3p 2R + 23679137 23679169 3'utr Pde8 FlyBase G14146.1 AACTATATAAACCATGTGAGTCTGTGTGTGCGT 9 23679153 0.742106882 4 8 62 0.941176471 1.204119983 0.705882353 0.555555556 0.764705882 9 1 0 16 2R:23679137-23679169 7 10.5 1126 FBgn0266377 2144.47 62.20666667 95.11333333 0.004896315 0.168792198 0.110394617 -10 -3 -6.5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG 2R 23679333 23679339 + 2R_23679333_23679339_+ 0.617298742 0.64379349 0.630546116 0.018734653 Pde8 FBtr0344184|FBtr0344179|FBtr0344182|FBtr0344178|FBtr0344183|FBtr0344177|FBtr0344176 23678688|23678688|23678688|23678688|23678688|23678688|23678688 23680017|23680017|23680844|23680844|23680844|23680017|23680017 2R + 23679294 23679355 3'utr Pde8 FlyBase G18602.1 CACAGCATATTGACCAGATCATATGGCGTGCGCTCCACTGTACCTGGCAACGGTATAATGTA 163 23679332 0.968632819 5 158 876 0.97311828 2.257678575 0.123655914 0.128834356 0.23655914 163 5 0 181 2R:23679294-23679355 7 Pde8 FBtr0344182|FBtr0344178|FBtr0344183|FBtr0344176|FBtr0344177|FBtr0344184|FBtr0344179 23678688|23678688|23678688|23678688|23678688|23678688|23678688 23680844|23680844|23680844|23680017|23680017|23680017|23680017 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" 2R + 23679305 23679350 3'utr Pde8 FlyBase G14147.1 GACCAGATCATATGGCGTGCGCTCCACTGTACCTGGCAACGGTATA 102 23679332 0.806597499 4 99 550 0.967320261 2.170261715 0.124183007 0.401960784 0.60130719 102 5 0 148 2R:23679305-23679350 7 131 1127 FBgn0266377 2144.47 62.20666667 95.11333333 0.061087355 2.105883614 1.377304269 1 1 1 0.2 dme-miR-12-5p 6mer2-7 ATACTC 2R 23699399 23699404 - 2R_23699399_23699404_- 0.60857276 0.986821436 0.797697098 0.26746215 CG4091 FBtr0072097|FBtr0072096|FBtr0072098 23698947|23698947|23698947 23699964|23699964|23699964 2R - 23699375 23699423 3'utr CG4091 FlyBase G26028.1 ATTCGTGGTCTACTTTTTGATACTCCCAAACTCGCTGTGTGCACCCGCA 19 23699406 0.815683846 6 17 115 0.916666667 1.342422681 0.166666667 0.210526316 0.375 19 2 0 22 2R:23699375-23699423 6 CG4091 FBtr0072096|FBtr0072098|FBtr0072097 23698947|23698947|23698947 23699964|23699964|23699964 ATACTC 6mer2-7 dme-miR-12-5p 2R - 23699368 23699422 3'utr CG4091 FlyBase G19695.1 TTCGTGGTCTACTTTTTGATACTCCCAAACTCGCTGTGTGCACCCGCAAGTAACT 10 23699407 0.987895681 5 10 79 1 1.230448921 0.529411765 0.4 0.647058824 10 0 0 17 2R:23699368-23699422 6 12.5 1128 FBgn0034894 369.3166667 23.85666667 36.49333333 0.033846293 0.523962554 0.342528316 2 3 2.5 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 2R 23699570 23699575 - 2R_23699570_23699575_- 0.994138219 0.976227097 0.985182658 0.01266506 CG4091 FBtr0072097|FBtr0072096|FBtr0072098 23698947|23698947|23698947 23699964|23699964|23699964 2R - 23699517 23699603 3'utr CG4091 FlyBase G26029.1 ATAATTAGGAAGAACCAAATGCATTTCGCCAAAGGAATTCACTAAACGGAAATTGTAAACTCGAGCAAAATGCTTTTATCGGTGTGT 16 23699582 0.718025162 10 13 79 0.777777778 1.146128036 0.055555556 0.125 0.222222222 16 4 0 14 2R:23699517-23699603 6 CG4091 FBtr0072096|FBtr0072098|FBtr0072097 23698947|23698947|23698947 23699964|23699964|23699964 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 23699520 23699597 3'utr CG4091 FlyBase G19696.1 AGGAAGAACCAAATGCATTTCGCCAAAGGAATTCACTAAACGGAAATTGTAAACTCGAGCAAAATGCTTTTATCGGTG 8 23699566 0.999137843 4 7 24 1 1 0.1 0.125 0.3 8 0 0 10 2R:23699520-23699597 6 6.5 1129 FBgn0034894 369.3166667 23.85666667 36.49333333 0.017600072 0.272460528 0.178114724 7 -9 -1 0.2 dme-miR-33-5p 8mer-A1 CAATGCAA 2R 23735298 23735305 - 2R_23735298_23735305_- 0.628969912 0.627302919 0.628136416 0.001178747 egl FBtr0114586|FBtr0343272 23734902|23734902 23735574|23735574 2R - 23735294 23735324 3'utr egl FlyBase G26042.1 AACAATCGACAAATCGTGGCAATGCAATCTT 7 23735309 0.680310251 3 6 36 0.875 0.84509804 0 0.142857143 0.25 7 1 0 7 2R:23735294-23735324 8 egl FBtr0114586|FBtr0343272 23734902|23734902 23735574|23735574 CAATGCAA 8mer-A1 dme-miR-33-5p 2R - 23735289 23735325 3'utr egl FlyBase G19706.1 TAACAATCGACAAATCGTGGCAATGCAATCTTACCGA 8 23735309 0.70124795 5 8 43 1 1.204119983 0 0.75 0.875 8 0 0 16 2R:23735289-23735325 8 7.5 1130 FBgn0000562 583.3166667 16.09333333 24.84 0.01285751 0.466031483 0.301932367 4 4 4 0.2 dme-miR-304-5p 6mer3-8 TGAGAT 2R 23811416 23811421 - 2R_23811416_23811421_- 0.999307441 0.957411663 0.978359552 0.029624734 Nxt1 FBtr0343270 23811319 23811686 2R - 23811371 23811506 3'utr Nxt1 FlyBase G26072.1 ACGCAAATTTCAGCAGACTTTCATCGTTACCGCCGAGAATGATAAATGGAAGGTCGTCTCCGATTGCTACCGAATGCAGGAGGTCTGAGATCCACACACTTGTATTTTAAGCTAAGCTAAAGTTCTTACGTCGTAA 17 23811405 0.973029836 10 17 101 1 1.361727836 0.173913043 0.235294118 0.434782609 17 0 0 23 2R:23811371-23811506 6 Nxt1 FBtr0343270 23811319 23811686 TGAGAT 6mer3-8 dme-miR-304-5p 2R - 23811370 23811435 3'utr Nxt1 FlyBase G19726.1 GAATGCAGGAGGTCTGAGATCCACACACTTGTATTTTAAGCTAAGCTAAAGTTCTTACGTCGTAAC 11 23811405 0.967848707 5 11 61 1 1.255272505 0.611111111 0.272727273 0.555555556 11 0 0 18 2R:23811370-23811435 6 5 1131 FBgn0028411 120.6666667 31.62 48.83333333 0.041436464 0.158127767 0.102389078 -16 -16 -16 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2R 23812252 23812257 - 2R_23812252_23812257_- 0.659458112 0.847659436 0.753558774 0.133078415 CG4797 FBtr0072239|FBtr0072239|FBtr0072239 23812183|23812183|23812183 23812425|23812425|23812425 2R - 23812233 23812281 3'utr CG4797 FlyBase G26074.1 AAATGTTAGGTTACCAATTCAAATTGTGATCGCTATGCTTTAAATTGTG 76 23812258 0.781653802 9 75 656 0.975903614 1.908485019 0.108433735 0.092105263 0.168674699 76 2 0 81 2R:23812233-23812281 6 CG4797 FBtr0072239|FBtr0072239|FBtr0072239 23812183|23812183|23812183 23812425|23812425|23812425 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 23812236 23812281 3'utr CG4797 FlyBase G19729.1 AAATGTTAGGTTACCAATTCAAATTGTGATCGCTATGCTTTAAATT 54 23812258 0.759231431 8 52 467 0.977777778 1.467361417 0.2 0.462962963 0.677777778 54 0 2 88 2R:23812236-23812281 6 65 1132 FBgn0034909 31.51666667 1.766666667 2.636666667 2.062400846 36.79245283 24.65233881 1 1 1 0.2 dme-miR-276a-3p 6mer3-8 AGTTCC 2R 23841612 23841617 - 2R_23841612_23841617_- 0.924932491 0.912217849 0.91857517 0.008990651 shu FBtr0072237 23841459 23841694 2R - 23841528 23841669 3'utr shu FlyBase G26083.1 ATATTTCATATCTTACTCAAAAAAAAAAACATACCAAACATGAAGGTAATTTAGTTCCAAGTTCTAGAAGAGCAGTATCATTAGTTATTTCGATATTAGCAACATGAATATCGTAAGCCCAGACGAATGTTAACGTTTTTTG 171 23841619 0.983912788 14 166 1308 0.974226804 1.975431809 0.128865979 0.116959064 0.221649485 171 4 1 189 2R:23841528-23841669 6 shu FBtr0072237 23841459 23841694 AGTTCC 6mer3-8 dme-miR-276a-3p 2R - 23841592 23841651 3'utr shu FlyBase G19735.1 AAAAAAAAAAACATACCAAACATGAAGGTAATTTAGTTCCAAGTTCTAGAAGAGCAGTAT 102 23841619 0.986593798 7 91 743 0.920529801 2.1430148 0.185430464 0.392156863 0.589403974 102 12 0 139 2R:23841592-23841651 6 113.5 1133 FBgn0003401 190.3333333 13.83333333 21.23 0.596322242 8.204819277 5.346208196 2 2 2 0.2 dme-miR-317-3p 8mer-A1 TGTGTTCA 2R 23846904 23846911 + 2R_23846904_23846911_+ 0.630863208 0.630800282 0.630831745 4.45E-05 CG5554 FBtr0343273|FBtr0072126 23846588|23846588 23847024|23847024 2R + 23846848 23846924 3'utr CG5554 FlyBase G18643.1 AACTAAATGTAACTTTAGTCGTATATTTTTACCTTTTGCCAAGCATTTTTGTATTTTGTGTTCAACTTGGTTTCCAC 46 23846903 0.993718318 9 45 576 0.966666667 1.763427994 0.15 0.239130435 0.416666667 46 2 0 58 2R:23846848-23846924 8 CG5554 FBtr0343273|FBtr0072126 23846588|23846588 23847024|23847024 TGTGTTCA 8mer-A1 dme-miR-317-3p 2R + 23846864 23846925 3'utr CG5554 FlyBase G14184.1 AGTCGTATATTTTTACCTTTTGCCAAGCATTTTTGTATTTTGTGTTCAACTTGGTTTCCACA 31 23846903 0.711980043 6 30 344 0.973684211 1.568201724 0.236842105 0.193548387 0.342105263 31 1 0 37 2R:23846864-23846925 8 33 1134 FBgn0034914 870.3333333 68.06 104.0466667 0.037916507 0.484866294 0.317165375 1 1 1 0.2 dme-miR-965-3p 7mer-m8 TACGCTT 2R 23848341 23848347 - 2R_23848341_23848347_- 0.619928576 0.486322376 0.553125476 0.09447385 ytr FBtr0343278|FBtr0072234 23847159|23847159 23848456|23848456 2R - 23848292 23848393 3'utr ytr FlyBase G26096.1 CGCCATCGCAGCAGCCACATCCTTTTCCGTTGCCCAACTAGTTTGCTACGCTTTTTTACTTGTCCGTGCCCAATGGGCAATGGGCGGCGGACGAAGACCTGC 53 23848340 0.984032123 9 51 402 0.939393939 1.190331698 0.060606061 0.20754717 0.363636364 53 1 3 62 2R:23848292-23848393 7 ytr FBtr0343278|FBtr0072234 23847159|23847159 23848456|23848456 TACGCTT 7mer-m8 dme-miR-965-3p 2R - 23848336 23848386 3'utr ytr FlyBase G19741.2 GCAGCAGCCACATCCTTTTCCGTTGCCCAACTAGTTTGCTACGCTTTTTTA 18 23848339 0.933267857 9 17 168 0.96 1.079181246 0.04 0.222222222 0.44 18 0 1 24 2R:23848336-23848386 7 19.5 1135 FBgn0021895 420.7166667 24.65 37.71666667 0.046349483 0.791075051 0.517012815 -7 -8 -7.5 0.2 dme-miR-79-3p 6mer3-8 TAGCTT 2R 23859488 23859493 - 2R_23859488_23859493_- 0.976581852 0.937865597 0.957223724 0.027376558 TBPH FBtr0089626 23859328 23859744 2R - 23859463 23859555 stop_codon TBPH FlyBase G26105.1 CTTTCTTTAAGGCGGTGCCTGTCACCCAATGATGTGGTTAATGTGGTTAACCAACACCTCTGTAGCTTACTTAAATTTACATATATGTATTCC 33 23859495 0.982081056 11 32 242 0.976190476 1.612783857 0.071428571 0.151515152 0.333333333 33 1 0 41 2R:23859463-23859555 6 TBPH FBtr0089626 23859328 23859744 TAGCTT 6mer3-8 dme-miR-79-3p 2R - 23859484 23859546 stop_codon TBPH FlyBase G19747.1 AGGCGGTGCCTGTCACCCAATGATGTGGTTAATGTGGTTAACCAACACCTCTGTAGCTTACTT 13 23859495 0.888250542 6 11 87 0.9 1.255272505 0.15 0.384615385 0.6 13 2 0 18 2R:23859484-23859546 6 11 1136 FBgn0025790 517.66 26.73666667 41.05666667 0.021249469 0.411420022 0.267922384 2 2 2 0.2 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 2R 23866617 23866623 + 2R_23866617_23866623_+ 0.620186081 0.620040702 0.620113392 0.000102813 CG5569 FBtr0072128 23866579 23866654 2R + 23866593 23866641 3'utr CG5569 FlyBase G18658.1 ACATCTAATGATTGTTTGAAAGGCTGGTGCTCTGTTAGAAATTAAACTG 27 23866618 0.753833411 8 26 220 0.965517241 1.146128036 0.172413793 0.074074074 0.137931034 27 0 1 28 2R:23866593-23866641 7 CG5569 FBtr0072128 23866579 23866654 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 2R + 23866598 23866641 3'utr CG5569 FlyBase G14196.1 TAATGATTGTTTGAAAGGCTGGTGCTCTGTTAGAAATTAAACTG 19 23866620 0.681212384 6 17 144 0.931034483 1.130333768 0.137931034 0.421052632 0.620689655 19 1 1 27 2R:23866598-23866641 7 23 1137 FBgn0034919 94.64666667 15.64666667 23.91333333 0.243009086 1.469961653 0.961806524 -1 -3 -2 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2R 23877307 23877312 + 2R_23877307_23877312_+ 0.989320753 0.989801765 0.989561259 0.000340118 ken FBtr0072129 23876776 23877442 2R + 23877234 23877339 3'utr ken FlyBase G18671.1 TGTCTATACGAGAGGTATTTTAATTGCTATTGTATTTCCAACTCGTCTAGCATGAACTTCATGGCCCAAACTTGTACCTATATCTACATTTTTGATAGTTTTGATA 222 23877306 0.980806451 16 213 1585 0.969465649 2.103803721 0.022900763 0.153153153 0.282442748 222 7 1 254 2R:23877234-23877339 6 ken FBtr0072129 23876776 23877442 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2R + 23877257 23877337 3'utr ken FlyBase G14210.1 TTGCTATTGTATTTCCAACTCGTCTAGCATGAACTTCATGGCCCAAACTTGTACCTATATCTACATTTTTGATAGTTTTGA 138 23877306 0.787548952 10 134 931 1 2.334453751 0.046296296 0.427536232 0.634259259 138 0 0 216 2R:23877257-23877337 6 161.5 1138 FBgn0011236 845.1733333 33.37333333 51.22333333 0.191085063 4.839192968 3.152860025 1 1 1 0.2 dme-miR-34-5p 7mer-A1 ACTGCCA 2R 23896809 23896815 + 2R_23896809_23896815_+ 0.724640298 0.719675458 0.722157878 0.003510644 CG17658 FBtr0072133 23896698 23896997 2R + 23896789 23896827 3'utr CG17658 FlyBase G18680.1 ATATTCTAAGTTACCTGATTACTGCCACAAGTATCAAGT 7 23896807 0.972159745 2 7 47 1 1.176091259 0.333333333 0.571428571 0.8 7 0 0 15 2R:23896789-23896827 7 CG17658 FBtr0072133 23896698 23896997 ACTGCCA 7mer-A1 dme-miR-34-5p 2R + 23896789 23896861 3'utr CG17658 FlyBase G14216.1 ATATTCTAAGTTACCTGATTACTGCCACAAGTATCAAGTTAGATGCATTAAAACTACCCAAGACTGTAGAATA 10 23896807 0.857858643 4 10 58 1 1.255272505 0.111111111 0.5 0.722222222 10 0 0 18 2R:23896789-23896861 7 6 1139 FBgn0034924 26.68 1.76 2.723333333 0.224887556 3.409090909 2.203182375 2 2 2 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 23896961 23896966 - 2R_23896961_23896966_- 0.957594734 0.999998404 0.978796569 0.029983944 CG5339 FBtr0072220 23896894 23897117 2R - 23896930 23896983 3'utr CG5339 FlyBase G26145.1 TTTATTCTTAAAGAATTACCAAAAATGTAAATGGATAAACAAACATGTTTAAAT 11 23896967 0.985968869 2 9 77 0.846153846 1.041392685 0 0.181818182 0.307692308 11 2 0 11 2R:23896930-23896983 6 CG5339 FBtr0072220 23896894 23897117 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 23896940 23896974 3'utr CG5339 FlyBase G19772.1 AAAGAATTACCAAAAATGTAAATGGATAAACAAAC 5 23896967 0.614491343 3 4 22 1 0.903089987 0 0.4 0.625 5 0 0 8 2R:23896940-23896974 6 7.5 1140 FBgn0034925 184.9866667 18.32333333 27.93333333 0.040543463 0.409314171 0.26849642 1 1 1 0.2 dme-miR-277-3p 7mer-A1 GCATTTA 2R 23897022 23897028 - 2R_23897022_23897028_- 0.758461274 0.794463238 0.776462256 0.025457188 CG5339 FBtr0072220 23896894 23897117 2R - 23896994 23897098 3'utr CG5339 FlyBase G26146.1 AAAAAGAACCCTTCTGAAGTTATTGTAACCGTTTTCCTCGTAGAGTTAAGTGGCTGCATTGAGAAACTGAGCATTTATACTTATTACAAATGTAGGCTATCAACT 30 23897031 0.957571383 15 29 229 0.96969697 1.505149978 0.242424242 0.1 0.181818182 30 1 0 32 2R:23896994-23897098 7 CG5339 FBtr0072220 23896894 23897117 GCATTTA 7mer-A1 dme-miR-277-3p 2R - 23896996 23897098 3'utr CG5339 FlyBase G19773.1 AAAAAGAACCCTTCTGAAGTTATTGTAACCGTTTTCCTCGTAGAGTTAAGTGGCTGCATTGAGAAACTGAGCATTTATACTTATTACAAATGTAGGCTATCAA 14 23897031 0.978847474 9 14 97 1 1.301029996 0.1 0.285714286 0.5 14 0 0 20 2R:23896996-23897098 7 10.5 1141 FBgn0034925 184.9866667 18.32333333 27.93333333 0.056760848 0.57303984 0.375894988 3 3 3 0.2 dme-miR-932-5p 7mer-A1 GAATTGA 2R 23928036 23928042 - 2R_23928036_23928042_- 0.773458463 0.785429383 0.779443923 0.008464705 Ca-P60A FBtr0072216 23927480 23929230 2R - 23928027 23928109 3'utr Ca-P60A FlyBase G26161.1 TCTATAGAATACCTACTTAAATTAACATTATACATAATTTACTCTGTTATACAATTAGAGACGCTGTGAATTGATTAAACAAA 38 23928055 0.792681964 11 33 252 0.862745098 1.166331422 0.078431373 0.210526316 0.411764706 38 5 2 44 2R:23928027-23928109 7 Ca-P60A FBtr0072216 23927480 23929230 GAATTGA 7mer-A1 dme-miR-932-5p 2R - 23928025 23928087 3'utr Ca-P60A FlyBase G19785.1 TAACATTATACATAATTTACTCTGTTATACAATTAGAGACGCTGTGAATTGATTAAACAAAAA 36 23928039 0.941945151 8 33 224 0.945454545 1.716003344 0.036363636 0.388888889 0.6 36 3 0 52 2R:23928025-23928087 7 31 1142 FBgn0263006 3996.03 108.55 166.07 0.0077577 0.285582681 0.186668272 13 -3 5 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 2R 23928916 23928921 - 2R_23928916_23928921_- 0.999999993 0.999973909 0.999986951 1.85E-05 Ca-P60A FBtr0072216 23927480 23929230 2R - 23928902 23928945 3'utr Ca-P60A FlyBase G26166.1 CGTATACCCTACCCTATAGATATCTGTGTTTGTATATTACTATA 17 23928923 0.780194526 7 15 169 0.916666667 1.342422681 0.041666667 0.411764706 0.583333333 17 2 0 22 2R:23928902-23928945 6 Ca-P60A FBtr0072216 23927480 23929230 TGTGTT 6mer3-8 dme-miR-317-3p 2R - 23928906 23928945 3'utr Ca-P60A FlyBase G19788.2 CGTATACCCTACCCTATAGATATCTGTGTTTGTATATTAC 12 23928915 0.680136648 5 9 110 0.833333333 1.176091259 0 0.333333333 0.555555556 12 3 0 15 2R:23928906-23928945 6 12.5 1143 FBgn0263006 3996.03 108.55 166.07 0.003128105 0.115154307 0.075269465 2 -6 -2 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 23946865 23946872 + 2R_23946865_23946872_+ 0.624921795 0.623750771 0.624336283 0.000828022 Galphas FBtr0072142|FBtr0343279|FBtr0072143|FBtr0072144|FBtr0301411 23946746|23946746|23946746|23946746|23946746 23946936|23946936|23946936|23946936|23946936 2R + 23946851 23946892 3'utr Galphas FlyBase G18723.1 AACAAAAAATTCGCTGCATTTAGATCTGGTATGACCTTTCAC 7 23946863 0.856928223 6 6 45 0.933333333 1.146128036 0.133333333 0.571428571 0.8 7 1 0 14 2R:23946851-23946892 8 Galphas FBtr0072144|FBtr0072143|FBtr0343279|FBtr0072142|FBtr0301411 23946746|23946746|23946746|23946746|23946746 23946936|23946936|23946936|23946936|23946936 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 23946854 23946881 3'utr Galphas FlyBase G14247.1 AAAAAATTCGCTGCATTTAGATCTGGTA 5 23946860 0.837023196 3 4 34 0.666666667 0.77815125 0 0.4 0.666666667 5 3 0 6 2R:23946854-23946881 8 5.5 1144 FBgn0001123 1422.84 105.62 161.5433333 0.003865508 0.052073471 0.034046592 2 5 3.5 0.2 dme-miR-14-3p 6mer2-7 AGACTG 2R 23985196 23985201 - 2R_23985196_23985201_- 0.545345983 0.559371022 0.552358502 0.009917173 Phm FBtr0072203 23985173 23985526 2R - 23985134 23985221 3'utr Phm FlyBase G26210.3 ATTCCACTACGCAGTAAATGAGACTGCTCCGACGTAAATATTTTCAATGCAAAGCATTTATTCTCGCGTTTTTTGTATGTATATAGAA 90 23985203 0.960679406 9 88 382 0.979591837 1.982271233 0.163265306 0.077777778 0.153061224 90 2 0 96 2R:23985134-23985221 6 Phm FBtr0072203 23985173 23985526 AGACTG 6mer2-7 dme-miR-14-3p 2R - 23985149 23985220 3'utr Phm FlyBase G19823.1 TTCCACTACGCAGTAAATGAGACTGCTCCGACGTAAATATTTTCAATGCAAAGCATTTATTCTCGCGTTTTT 50 23985203 0.941227515 8 49 198 0.986842105 1.574031268 0.171052632 0.42 0.618421053 50 0 1 75 2R:23985149-23985220 6 65 1145 FBgn0019948 999.0666667 82.65666667 126.22 0.065060723 0.78638545 0.514973855 2 2 2 0.2 dme-miR-999-3p 6mer3-8 AGTTAA 2R 24020022 24020027 - 2R_24020022_24020027_- 0.749785702 0.759970171 0.754877936 0.007201529 CG3907 FBtr0072195|FBtr0072196 24019896|24019896 24020237|24020237 2R - 24019974 24020109 3'utr CG3907 FlyBase G26229.1 GAAAACTGCAATGTACATATGGTTCGAAGAGCTATTTAACTTAATGACAATTTATAGGATGACGATGTGCACGTGTGATTTCAGTTAAGCAGTTAAGTTTAGAAAGAGTAAATGTACATATGGGGGGGGCGAAGTA 426 24020030 0.979985828 21 408 3226 0.958 1.777245526 0.354 0.143192488 0.27 426 14 7 479 2R:24019974-24020109 6 CG3907 FBtr0072195|FBtr0072196 24019896|24019896 24020237|24020237 AGTTAA 6mer3-8 dme-miR-999-3p 2R - 24019923 24020128 3'utr CG3907 FlyBase G19835.1 AATTACATTTATTGCACACGAAAACTGCAATGTACATATGGTTCGAAGAGCTATTTAACTTAATGACAATTTATAGGATGACGATGTGCACGTGTGATTTCAGTTAAGCAGTTAAGTTTAGAAAGAGTAAATGTACATATGGGGGGGGCGAAGTAAGTGTAAGTCCAACATTATTCACTTTAGATACACGATATGTATTTTATTTG 350 24020030 0.982182462 23 344 2560 0.987084871 2.126293791 0.348708487 0.394285714 0.608856089 350 4 3 535 2R:24019923-24020128 6 267 1146 FBgn0034958 1493.146667 107.1866667 164.3533333 0.178816995 2.490981465 1.624548736 3 3 3 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 24020208 24020213 - 2R_24020208_24020213_- 0.999997987 0.999807192 0.99990259 0.000134916 CG3907 FBtr0072195|FBtr0072196 24019896|24019896 24020237|24020237 2R - 24020149 24020323 lincRNA_intron-lincRNA_exon CG3907 FlyBase G26230.1 AGCCCGAAGCGATTGCCGTCAAGCAGGAAGTCATAAAGCCGTCTGCAAATGCTACAGTGAAGCTTCAGGAATCCTTGAAGCTGTAAGCTGCTGCATTGCTGCGTTGTATTACCAAATTTGTTCGATTCCGTATTTAGCCATTAAGACCTCATGGATTCCATGTGTCCGAGTTACA 83 24020198 0.881809046 27 78 648 0.951923077 1.995635195 0.201923077 0.192771084 0.355769231 83 5 0 99 2R:24020149-24020323 6 CG3907 FBtr0072195|FBtr0072196 24019896|24019896 24020237|24020237 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 24020142 24020252 stop_codon CG3907 FlyBase G19836.1 TCCTTGAAGCTGTAAGCTGCTGCATTGCTGCGTTGTATTACCAAATTTGTTCGATTCCGTATTTAGCCATTAAGACCTCATGGATTCCATGTGTCCGAGTTACAGCCAACG 48 24020206 0.931047451 19 45 409 0.972222222 1.84509804 0.277777778 0.291666667 0.527777778 48 2 0 70 2R:24020142-24020252 6 27.5 1147 FBgn0034958 1493.146667 107.1866667 164.3533333 0.018417481 0.256561761 0.167322435 -15 -7 -11 0.2 dme-miR-34-5p 6mer2-7 ACTGCC 2R 24031590 24031595 - 2R_24031590_24031595_- 0.691611249 0.698037889 0.694824569 0.004544363 Chi FBtr0072192|FBtr0072191 24031536|24031536 24031803|24031803 2R - 24031578 24031625 3'utr Chi FlyBase G26246.1 AAACCGTAGGATACTTCTGTTCTTGTCTTGACTGCCTTGCAAAGTACT 29 24031599 0.650413198 8 26 273 0.921052632 1.544068044 0.078947368 0.24137931 0.421052632 29 3 0 35 2R:24031578-24031625 6 Chi FBtr0072192|FBtr0072191 24031536|24031536 24031803|24031803 ACTGCC 6mer2-7 dme-miR-34-5p 2R - 24031560 24031613 3'utr Chi FlyBase G19846.1 ACTTCTGTTCTTGTCTTGACTGCCTTGCAAAGTACTTAATGTGTTGTTTTAGTA 25 24031600 0.970228801 9 23 252 0.897435897 1.544068044 0.179487179 0.44 0.641025641 25 4 0 35 2R:24031560-24031613 6 25.5 1148 FBgn0013764 624.9866667 35.29333333 53.78666667 0.04080087 0.722516056 0.474095191 4 5 4.5 0.2 dme-miR-305-5p 7mer-m1 GTACAAT 2R 24044373 24044379 + 2R_24044373_24044379_+ 0.76442689 0.765586663 0.765006776 0.000820102 IntS1 FBtr0072168 24044337 24044458 2R + 24044344 24044384 3'utr IntS1 FlyBase G18814.2 CGGTCTATAAGTTAGAACCGTCATCATATGTACAATGTAAT 10 24044369 0.597909211 5 9 57 1 1.113943352 0.153846154 0.3 0.461538462 10 0 0 13 2R:24044344-24044384 7 IntS1 FBtr0072168 24044337 24044458 GTACAAT 7mer-m1 dme-miR-305-5p 2R + 24044353 24044384 3'utr IntS1 FlyBase G14309.1 AGTTAGAACCGTCATCATATGTACAATGTAAT 8 24044368 0.640308137 3 8 54 1 1.041392685 0.090909091 0.25 0.454545455 8 0 0 11 2R:24044353-24044384 7 8 1149 FBgn0034964 864.9966667 16.29666667 25.03666667 0.009248591 0.490897934 0.319531354 4 5 4.5 0.2 dme-miR-282-5p 7mer-A1 GAGGCTA 2R 24052999 24053005 + 2R_24052999_24053005_+ 0.804647233 0.804714031 0.804680632 4.72E-05 sei FBtr0343342|FBtr0072169|FBtr0072170 24052939|24052939|24052939 24053035|24053035|24053035 2R + 24052982 24053014 3'utr sei FlyBase G18820.1 TGTGCACAAGCTGTTGCGAGGCTAAAGAGCGAA 21 24052996 0.707925865 2 21 71 1 1.361727836 0.304347826 0.047619048 0.130434783 21 0 0 23 2R:24052982-24053014 7 sei FBtr0072170|FBtr0343342|FBtr0072169 24052939|24052939|24052939 24053035|24053035|24053035 GAGGCTA 7mer-A1 dme-miR-282-5p 2R + 24052982 24053015 3'utr sei FlyBase G14312.1 TGTGCACAAGCTGTTGCGAGGCTAAAGAGCGAAA 17 24052996 0.721416372 2 17 62 1 1.380211242 0.666666667 0.411764706 0.583333333 17 0 0 24 2R:24052982-24053015 7 19 1150 FBgn0003353 165.25 6.316666667 9.546666667 0.114977307 3.007915567 1.990223464 3 3 3 0.2 dme-bantam-3p 8mer-A1 TGATCTCA 2R 24089378 24089385 + 2R_24089378_24089385_+ 0.631046624 0.629565474 0.630306049 0.001047296 snama FBtr0307174 24089270 24089512 2R + 24089309 24089420 3'utr snama FlyBase G18849.1 GATCGAGTCAAGTGTCGAGGCCACTGGAACTCCGAGGTGTTGACGAGTCCATACGCAGCCGGTCCTGCCTGATCTCAATATTTTTAAGTTCCAACAGAGACTATACACACAC 48 24089376 0.982996232 13 45 341 0.927272727 1.40654018 0.054545455 0.145833333 0.254545455 48 3 1 51 2R:24089309-24089420 8 snama FBtr0307174 24089270 24089512 TGATCTCA 8mer-A1 dme-bantam-3p 2R + 24089337 24089420 3'utr snama FlyBase G14345.1 ACTCCGAGGTGTTGACGAGTCCATACGCAGCCGGTCCTGCCTGATCTCAATATTTTTAAGTTCCAACAGAGACTATACACACAC 27 24089377 0.987153797 7 23 201 0.844444444 1.579783597 0 0.481481481 0.688888889 27 7 0 38 2R:24089337-24089420 8 27.5 1151 FBgn0086129 1271.946667 47.64 73.46 0.021620403 0.577246012 0.37435339 2 1 1.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 24127704 24127710 - 2R_24127704_24127710_- 0.6616155 0.483801651 0.572708576 0.125733344 tamo FBtr0072282|FBtr0072281|FBtr0343438 24126636|24126636|24127142 24127812|24127812|24127812 2R - 24127677 24127745 3'utr tamo FlyBase G26309.1 ACGACCAATGTAAGCCTGTGCGCGTGTCTCTAAGATCTAGTCTCGATCGAAGTCGTCGTTCGATGGCAG 22 24127710 0.674359391 9 19 141 0.870967742 1.431363764 0.290322581 0.363636364 0.548387097 22 4 0 27 2R:24127677-24127745 7 tamo FBtr0072282|FBtr0072281|FBtr0343438 24126636|24126636|24127142 24127812|24127812|24127812 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R - 24127655 24127745 3'utr tamo FlyBase G19899.1 ACGACCAATGTAAGCCTGTGCGCGTGTCTCTAAGATCTAGTCTCGATCGAAGTCGTCGTTCGATGGCAGGCAGCCCTTTGTCATCCGCATT 14 24127710 0.877752855 8 12 103 0.888888889 0.903089987 0.333333333 0.142857143 0.333333333 14 1 1 16 2R:24127655-24127745 7 8.5 1152 FBgn0041582 428.8966667 12.44 19.01333333 0.019818293 0.683279743 0.447054698 0 0 0 0.2 dme-miR-1008-3p 6mer3-8 AGCTGT 2R 24177180 24177185 + 2R_24177180_24177185_+ 0.777155597 0.921238131 0.849196864 0.101881713 Nop60B FBtr0300861|FBtr0100213|FBtr0300227 24177104|24177104|24177104 24186343|24186343|24186343 2R + 24177104 24177279 stop_codon Nop60B FlyBase G18885.1 AGGAATCAGAAGTTTCTATAGGATTAGGTTTTAAAGAGAATTCTACGCTTTTTTGTAGAGGCACCTACCGATTGCTAGCTGTTAGGTTTAAGGAGTGTTTTTATGTGTAGAAGTGCATACAAATTACAAATGCATTTAAGTGACATTCGCAATGCAATAAATTGAACATTTTATTG 380 24177176 0.832317126 39 351 3036 0.917410714 1.437750563 0.303571429 0.157894737 0.285714286 380 23 14 411 2R:24177104-24177279 6 Nop60B FBtr0300227|FBtr0300861|FBtr0100213 24177104|24177104|24177104 24186343|24186343|24186343 AGCTGT 6mer3-8 dme-miR-1008-3p 2R + 24177090 24177270 stop_codon Nop60B FlyBase G14369.1 CGAAGCTCAGGAATAGGAATCAGAAGTTTCTATAGGATTAGGTTTTAAAGAGAATTCTACGCTTTTTTGTAGAGGCACCTACCGATTGCTAGCTGTTAGGTTTAAGGAGTGTTTTTATGTGTAGAAGTGCATACAAATTACAAATGCATTTAAGTGACATTCGCAATGCAATAAATTGAAC 207 24177176 0.987847291 32 182 1632 0.898360656 1.358569317 0.275409836 0.347826087 0.557377049 207 20 11 274 2R:24177090-24177270 6 146.5 1153 FBgn0259937 3319.8 215.61 334.3133333 0.044129164 0.679467557 0.438211658 4 4 4 0.2 dme-miR-33-5p 8mer-A1 CAATGCAA 2R 24264882 24264889 + 2R_24264882_24264889_+ 0.604436107 0.577984934 0.59121052 0.018703823 CG3376 FBtr0072265 24264348 24265213 2R + 24264853 24265208 3'utr CG3376 FlyBase G18961.4 TGGTCGTTTGAGGTCATCCAACTGCAAGTCAATGCAATCGCAACGAAGGAAAACTCCTACCCCATAAGCTTACTATGTGATAACTAGTGCTTAAAACCATTTCGCTTAGTGTACGTTAACGCAATGATGTCCCAAAACTGCCTGCTTTGAAACCTTACAATCGCCCTTCGGAATCTGAGTCAGTGAAGAATAGTCATTTATCTGTAATCGAGTCGATGCTGTTGCCCACTCCGCAGCATTTGCGGTCGTGGCATGTTGCGCGCTTTTACGCAATGGAAATTGTCGAGCAAATTACCTTCTAAGACACCTAATTGTAAAGCTAACCTAGGTCTTAACTTAAATAAAGTGCAATTATT 255 24264881 0.974749414 47 237 1375 0.920127796 1.857332496 0.309904153 0.192156863 0.341853035 255 22 3 288 2R:24264853-24265208 8 CG3376 FBtr0072265|FBtr0343442 24264348|24264838 24265213|24265213 CAATGCAA 8mer-A1 dme-miR-33-5p 2R + 24264851 24264963 3'utr CG3376 FlyBase G14427.2 GATGGTCGTTTGAGGTCATCCAACTGCAAGTCAATGCAATCGCAACGAAGGAAAACTCCTACCCCATAAGCTTACTATGTGATAACTAGTGCTTAAAACCATTTCGCTTAGTG 93 24264881 0.923431083 14 79 385 0.869565217 1.037788561 0.326086957 0.344086022 0.557971014 93 8 10 120 2R:24264851-24264963 8 70.5 1154 FBgn0034997 1791.34 62.30666667 94.61 0.039356013 1.131500107 0.745164359 1 1 1 0.2 dme-miR-1006-3p 8mer-A1 CGAATTTA 2R 24312766 24312773 + 2R_24312766_24312773_+ 0.6471684 0.610441839 0.62880512 0.025969628 betaTub60D FBtr0072270|FBtr0343443 24312146|24312146 24313099|24313099 2R + 24312675 24312853 3'utr betaTub60D FlyBase G18982.1 AACCCCAAGTTATCCCACGTCATTCTTATACTACTATTTATATCGCAACGTCAGCAGAAGGACCACAAGTATCTAGTATTGCAAAGGATATCGAATTTATGCAGAAATCTCAAAACGAGAATGTCCAGCGTCTAGGAAGTCGGCACTCAAGACTTGGCGGCACTTACGTTTAGGGCTAT 110 24312765 0.968301615 22 105 645 0.94488189 2.079181246 0.212598425 0.145454545 0.25984252 110 7 0 120 2R:24312675-24312853 8 betaTub60D FBtr0343443|FBtr0072270 24312146|24312146 24313099|24313099 CGAATTTA 8mer-A1 dme-miR-1006-3p 2R + 24312670 24312786 3'utr betaTub60D FlyBase G14446.1 TTCATAACCCCAAGTTATCCCACGTCATTCTTATACTACTATTTATATCGCAACGTCAGCAGAAGGACCACAAGTATCTAGTATTGCAAAGGATATCGAATTTATGCAGAAATCTCA 54 24312748 0.965927473 16 50 287 0.934065934 1.452297671 0.131868132 0.518518519 0.714285714 54 4 2 85 2R:24312670-24312786 8 27 1155 FBgn0003888 691.4333333 33.13333333 50.45333333 0.039049318 0.814889336 0.535147992 1 18 9.5 0.2 dme-miR-1003-3p 6mer2-7 TGTGAG 2R 24392317 24392322 - 2R_24392317_24392322_- 0.965140262 0.965794576 0.965467419 0.00046266 slik FBtr0072366|FBtr0332925|FBtr0072364 24392127|24392127|24392127 24393053|24393053|24393053 2R - 24392173 24392367 3'utr slik FlyBase G26328.1 AACAGAAGAAATATGTGAGATGTTGGGATTCCATGAAACAAATTGTGTGAGCGCTCGAGTTTTGAGCTGCAGACGGACGTAGATATGCAGATCGATAATGAGGGGCCGTCGGGTAACAGTAAACGATATTTATATTTGTACAAGTTTATGCTTATATATTTTATATAAATATATATATATATATTTAAAATAAAC 45 24392325 0.983309584 18 44 281 0.981818182 1.73239376 0.381818182 0.2 0.345454545 45 1 0 54 2R:24392173-24392367 6 slik FBtr0332925|FBtr0072364|FBtr0072366 24392127|24392127|24392127 24393053|24393053|24393053 TGTGAG 6mer2-7 dme-miR-1003-3p 2R - 24392210 24392416 3'utr slik FlyBase G19913.1 AGAGACAGAGACACATCCACGGAAAGTTTAGCAAAAGTTAATGTGTAGCAACAGAAGAAATATGTGAGATGTTGGGATTCCATGAAACAAATTGTGTGAGCGCTCGAGTTTTGAGCTGCAGACGGACGTAGATATGCAGATCGATAATGAGGGGCCGTCGGGTAACAGTAAACGATATTTATATTTGTACAAGTTTATGCTTATATA 33 24392325 0.973928813 16 32 196 0.962264151 1.707570176 0.377358491 0.393939394 0.622641509 33 2 0 51 2R:24392210-24392416 6 13 1156 FBgn0035001 5352.49 110.13 168.49 0.002428776 0.118042314 0.077155914 3 3 3 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2R 24394005 24394010 - 2R_24394005_24394010_- 0.623922995 0.882156046 0.753039521 0.182598305 slik FBtr0290019 24393676 24394246 2R - 24393988 24394036 3'utr slik FlyBase G26335.1 AATTTGTAAAGCTTTTCTCACCTAATTACCTGCAACGGAAAATGCCATA 15 24394011 0.978960368 2 13 92 0.941176471 0.903089987 0.117647059 0.133333333 0.235294118 15 0 1 16 2R:24393988-24394036 6 slik FBtr0290019 24393676 24394246 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2R - 24393900 24394038 3'utr slik FlyBase G19920.1 CGAATTTGTAAAGCTTTTCTCACCTAATTACCTGCAACGGAAAATGCCATACATTCTGTCTTGCCAAAAGTTGATTGTTTGTTGGAAATGCTATTTTAATGAACGAAAGTGGATTACTTGTTTGCCTATTTTTAATGTT 17 24394011 0.984509555 9 17 141 1 1.397940009 0.12 0.470588235 0.64 17 0 0 25 2R:24393900-24394038 6 11 1157 FBgn0035001 5352.49 110.13 168.49 0.002055118 0.099881958 0.065285774 1 1 1 0.2 dme-miR-33-5p 7mer-m8 CAATGCA 2R 24404714 24404720 - 2R_24404714_24404720_- 0.63612245 0.645402998 0.640762724 0.006562304 SerT FBtr0072362|FBtr0343316 24404593|24404593 24405451|24405451 2R - 24404700 24404736 3'utr SerT FlyBase G26370.1 TAGAGAACGCCCTGTACAATGCATTACTCAACCGTTT 26 24404713 0.720391733 5 26 126 1 1.531478917 0.176470588 0.192307692 0.382352941 26 0 0 34 2R:24404700-24404736 7 SerT FBtr0072362|FBtr0343316 24404593|24404593 24405451|24405451 CAATGCA 7mer-m8 dme-miR-33-5p 2R - 24404702 24404739 3'utr SerT FlyBase G19950.1 AGATAGAGAACGCCCTGTACAATGCATTACTCAACCGT 14 24404713 0.702134529 5 14 63 1 1.414973348 0.230769231 0.571428571 0.769230769 14 0 0 26 2R:24404702-24404739 7 19.5 1158 FBgn0010414 3 0.116666667 0.176666667 6.5 167.1428571 110.3773585 -7 -7 -7 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2R 24414144 24414150 + 2R_24414144_24414150_+ 0.652643122 0.636457229 0.644550176 0.01144516 CG45068 FBtr0344430 24414110 24415295 2R + 24414096 24414169 stop_codon CG45068 FlyBase G19003.1 GGAAACCGCGGCGTAGTCTTCACTTCTTGGCCAGTCCAAGTGCCTTATACCAAAGTTCTAGGTTAAGATTAACT 42 24414143 0.988669692 7 41 378 0.976744186 1.62324929 0.023255814 0.023809524 0.046511628 42 1 0 42 2R:24414096-24414169 7 CG45068 FBtr0344430 24414110 24415295 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 24414093 24414165 stop_codon CG45068 FlyBase G14462.1 GACGGAAACCGCGGCGTAGTCTTCACTTCTTGGCCAGTCCAAGTGCCTTATACCAAAGTTCTAGGTTAAGATT 23 24414143 0.985142535 6 23 188 1 1.556302501 0.138888889 0.347826087 0.583333333 23 0 0 36 2R:24414093-24414165 7 30 1159 FBgn0266438 77.02666667 2.906666667 4.47 0.389475506 10.32110092 6.711409396 1 1 1 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2R 24414289 24414295 + 2R_24414289_24414295_+ 0.805208066 0.766614708 0.785911387 0.027289655 CG45068 FBtr0344430 24414110 24415295 2R + 24414258 24414325 3'utr CG45068 FlyBase G19004.1 GTGCACAGCAAACTTGAAATTTTGAATATGGCTAGTCATTACCAAATATTCCCTTGATCTTAAGATTC 42 24414296 0.973008794 9 36 333 0.905660377 1.204119983 0.018867925 0.142857143 0.320754717 42 3 2 48 2R:24414258-24414325 7 CG45068 FBtr0344430 24414110 24415295 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R + 24414223 24414318 3'utr CG45068 FlyBase G14463.1 TTGTTAAGCTTGACTTCTGTAAACATTCCCAATATGTGCACAGCAAACTTGAAATTTTGAATATGGCTAGTCATTACCAAATATTCCCTTGATCTT 34 24414296 0.984861332 13 30 262 0.879310345 1.707570176 0.051724138 0.5 0.706896552 34 7 0 51 2R:24414223-24414318 7 30.5 1160 FBgn0266438 77.02666667 2.906666667 4.47 0.395966765 10.49311927 6.823266219 -7 -7 -7 0.2 dme-miR-8-3p 7mer-A1 AGTATTA 2R 24523359 24523365 - 2R_24523359_24523365_- 0.627862028 0.796662068 0.712262048 0.119359695 CG4612 FBtr0306137 24521872 24524317 2R - 24523341 24523382 3'utr CG4612 FlyBase G26393.1 CCTGCGGACAGTACATGAGTATTAAAATTTTAGCGATTACAA 12 24523367 0.876618982 2 10 76 0.833333333 1 0.25 0 0 12 2 0 10 2R:24523341-24523382 7 CG4612 FBtr0306137 24521872 24524317 AGTATTA 7mer-A1 dme-miR-8-3p 2R - 24523340 24523385 3'utr CG4612 FlyBase G19968.1 TATCCTGCGGACAGTACATGAGTATTAAAATTTTAGCGATTACAAG 7 24523367 0.967021972 3 7 44 1 1 0.3 0.428571429 0.6 7 0 0 10 2R:24523340-24523385 7 9.5 1161 FBgn0035016 1738.693333 59.93333333 91.91666667 0.005463873 0.158509455 0.103354488 2 2 2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 24557543 24557549 + 2R_24557543_24557549_+ 0.67198666 0.66218842 0.66708754 0.006928444 ITP FBtr0290219|FBtr0290219|FBtr0290219 24556424|24556424|24556424 24558961|24558961|24558961 2R + 24557499 24557593 3'utr ITP FlyBase G19028.1 AAAGGATAATCAATCATTCGCTGGCTATTTGAGAGCATCAAAATTGTGATAAATGAGAATTAGAATGCGAATGCGCGACGCAGGACACCGCCAGA 236 24557542 0.970189644 11 222 1268 0.939285714 1.419955748 0.189285714 0.156779661 0.289285714 236 8 9 263 2R:24557499-24557593 7 ITP FBtr0290219|FBtr0290219|FBtr0290219 24556424|24556424|24556424 24558961|24558961|24558961 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 24557491 24557583 3'utr ITP FlyBase G14478.1 AAATTAATAAAGGATAATCAATCATTCGCTGGCTATTTGAGAGCATCAAAATTGTGATAAATGAGAATTAGAATGCGAATGCGCGACGCAGGA 156 24557542 0.969239642 10 148 831 0.946188341 1.421192468 0.174887892 0.314102564 0.520179372 156 5 7 211 2R:24557491-24557583 7 182 1162 FBgn0035023 1304.81 56.75666667 87.48 0.13948391 3.206671757 2.080475537 1 1 1 0.2 dme-miR-282-5p 7mer-m8 AGAGGCT 2R 24558069 24558075 + 2R_24558069_24558075_+ 0.548629845 0.623611438 0.586120641 0.053019998 ITP FBtr0290219 24556424 24558961 2R + 24558035 24558100 3'utr ITP FlyBase G19030.1 AATGCTTCGGATCGCCCTTCTTCAACGCCTGCATAGAGGCTCTTCAGCTGCACGAGGAGATGGACA 65 24558068 0.913785312 6 62 363 0.948717949 1.86923172 0.397435897 0.184615385 0.320512821 65 4 0 74 2R:24558035-24558100 7 ITP FBtr0290219 24556424 24558961 AGAGGCT 7mer-m8 dme-miR-282-5p 2R + 24558047 24558091 3'utr ITP FlyBase G14480.1 CGCCCTTCTTCAACGCCTGCATAGAGGCTCTTCAGCTGCACGAGG 25 24558068 0.874456466 3 20 129 0.815789474 1.491361694 0.552631579 0.32 0.552631579 25 7 0 31 2R:24558047-24558091 7 41 1163 FBgn0035023 1304.81 56.75666667 87.48 0.031422199 0.722382099 0.468678555 1 1 1 0.2 dme-miR-79-3p 6mer2-7 AGCTTT 2R 24558473 24558478 + 2R_24558473_24558478_+ 0.931447892 0.953781028 0.94261446 0.015791886 ITP FBtr0300186|FBtr0290219 24558137|24556424 24558961|24558961 2R + 24558448 24558492 3'utr ITP FlyBase G19032.1 CATCTGTCATGAAACAGTCTCGTGGAGCTTTTAGTTGTAGTGAAT 12 24558478 0.988365208 8 12 114 1 1.113943352 0.153846154 0.083333333 0.153846154 12 0 0 13 2R:24558448-24558492 6 ITP FBtr0290219|FBtr0300186 24556424|24558137 24558961|24558961 AGCTTT 6mer2-7 dme-miR-79-3p 2R + 24558458 24558492 3'utr ITP FlyBase G14481.1 GAAACAGTCTCGTGGAGCTTTTAGTTGTAGTGAAT 10 24558479 0.610112055 7 9 95 0.933333333 1.146128036 0.4 0.5 0.666666667 10 1 0 14 2R:24558458-24558492 6 11 1164 FBgn0035023 1304.81 56.75666667 87.48 0.008430346 0.193809831 0.125743027 -5 -6 -5.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 24558909 24558915 + 2R_24558909_24558915_+ 0.661614346 0.661603967 0.661609156 7.28E-06 ITP FBtr0300186|FBtr0290219 24558137|24556424 24558961|24558961 2R + 24558890 24558934 3'utr ITP FlyBase G19035.1 TAATTTAAACTTGTTTGGATCTAGTCGTAAAATATAAATAAAGAT 51 24558907 0.626572594 12 43 451 0.877192982 1.096910013 0.01754386 0.098039216 0.192982456 51 4 3 50 2R:24558890-24558934 7 ITP FBtr0290219|FBtr0300186 24556424|24558137 24558961|24558961 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 24558886 24558938 3'utr ITP FlyBase G14485.1 TAATTAATTTAAACTTGTTTGGATCTAGTCGTAAAATATAAATAAAGATTGTA 31 24558904 0.644614109 12 25 267 0.840909091 1.267171728 0.113636364 0.35483871 0.545454545 31 6 1 37 2R:24558886-24558938 7 39.5 1165 FBgn0035023 1304.81 56.75666667 87.48 0.030272607 0.695953486 0.451531779 2 5 3.5 0.2 dme-bantam-3p 6mer3-8 TGATCT 2R 24568160 24568165 - 2R_24568160_24568165_- 0.993670982 0.999936306 0.996803644 0.004430236 Fcp1 FBtr0343489|FBtr0072342 24567985|24567985 24568459|24568459 2R - 24568154 24568185 3'utr Fcp1 FlyBase G26412.1 TGAATCAAAAACTCTCATTCTGATCTAATGTA 9 24568166 0.684736527 4 8 63 0.846153846 1.041392685 0 0.222222222 0.461538462 9 2 0 11 2R:24568154-24568185 6 Fcp1 FBtr0343489|FBtr0072342 24567985|24567985 24568459|24568459 TGATCT 6mer3-8 dme-bantam-3p 2R - 24568128 24568177 3'utr Fcp1 FlyBase G19979.1 AAACTCTCATTCTGATCTAATGTAAATTGAAGCCTACTGTAAATGTAAAT 6 24568165 0.990418314 4 5 46 0.8 0.903089987 0 0.333333333 0.6 6 2 0 8 2R:24568128-24568177 6 6.5 1166 FBgn0035026 362.9966667 13.60666667 20.97333333 0.017906501 0.477707006 0.309917355 1 0 0.5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2R 24577629 24577634 + 2R_24577629_24577634_+ 0.998631933 0.97526093 0.986946431 0.016525793 Start1 FBtr0089868|FBtr0305054|FBtr0089867|FBtr0343485 24577463|24577463|24577260|24577463 24577676|24577676|24577676|24577676 2R + 24577553 24577648 3'utr Start1 FlyBase G19067.1 AATTTGAAGCAGGAGAGCGAGTTCAGTGCTGTAAGTTTATTGAGTATTTTATGTATATGTATGGCATAAGTTCTATGTACCTATATGCACGGCTTA 18 24577628 0.987528605 11 18 158 1 1.342422681 0.227272727 0.166666667 0.318181818 18 0 0 22 2R:24577553-24577648 6 Start1 FBtr0089867|FBtr0343485|FBtr0089868|FBtr0305054 24577260|24577463|24577463|24577463 24577676|24577676|24577676|24577676 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2R + 24577613 24577640 3'utr Start1 FlyBase G14505.1 ATGGCATAAGTTCTATGTACCTATATGC 5 24577628 0.873907199 2 5 36 1 0.77815125 0.5 0.2 0.333333333 5 0 0 6 2R:24577613-24577640 6 7 1167 FBgn0035028 314 17.47 26.84 0.022292994 0.400686892 0.260804769 1 1 1 0.2 dme-miR-932-5p 7mer-m8 GGAATTG 2R 24671705 24671711 - 2R_24671705_24671711_- 0.545731548 0.47176133 0.508746439 0.05230483 Mmp1 FBtr0304005|FBtr0304008|FBtr0273263|FBtr0304009|FBtr0304011|FBtr0304010|FBtr0306656 24671292|24671292|24671292|24671292|24671292|24671292|24671292 24673278|24672142|24672142|24672765|24672765|24673278|24673278 2R - 24671686 24671763 3'utr Mmp1 FlyBase G26433.1 GCTGTTTTGGTAATGACAAATTGCGATATTAAATTTAACGAGCCATATGCAAGGAATTGGAGAGAACCAAACAAAAAT 51 24671716 0.865118391 8 43 256 0.836065574 1.008600172 0.229508197 0.176470588 0.31147541 51 6 4 51 2R:24671686-24671763 7 Mmp1 FBtr0304011|FBtr0306656|FBtr0304009|FBtr0304010|FBtr0273263|FBtr0304005|FBtr0304008 24671292|24671292|24671292|24671292|24671292|24671292|24671292 24672765|24673278|24672765|24673278|24672142|24673278|24672142 GGAATTG 7mer-m8 dme-miR-932-5p 2R - 24671689 24671762 3'utr Mmp1 FlyBase G19998.1 CTGTTTTGGTAATGACAAATTGCGATATTAAATTTAACGAGCCATATGCAAGGAATTGGAGAGAACCAAACAAA 23 24671716 0.975477956 4 20 124 0.868421053 1.51851394 0.184210526 0.47826087 0.684210526 23 5 0 33 2R:24671689-24671762 7 23 1168 FBgn0035049 2672.446667 111.6666667 172.33 0.008606346 0.205970149 0.133464864 5 5 5 0.2 dme-miR-1007-3p 7mer-m8 TGAGCTT 2R 24766341 24766347 + 2R_24766341_24766347_+ 0.599220878 0.620178248 0.609699563 0.014819049 CG3894 FBtr0300130 24766264 24766750 2R + 24766331 24766412 3'utr CG3894 FlyBase G19117.1 GAAGTGTGCATGAGCTTGGGTCGTGATAGTCTGTTTACCCATATATATATTGTATACGCCTGCAGCGCTAGTGAAGGGCCCT 24 24766363 0.953718487 13 23 171 0.931034483 1.431363764 0.24137931 0.208333333 0.344827586 24 2 0 27 2R:24766331-24766412 7 CG3894 FBtr0300130 24766264 24766750 TGAGCTT 7mer-m8 dme-miR-1007-3p 2R + 24766317 24766373 3'utr CG3894 FlyBase G14538.1 AATGCGTGTTTGGGGAAGTGTGCATGAGCTTGGGTCGTGATAGTCTGTTTACCCATA 17 24766362 0.771413649 9 16 135 0.965517241 1.146128036 0.034482759 0.529411765 0.724137931 17 0 1 28 2R:24766317-24766373 7 15.5 1169 FBgn0035059 104 8.213333333 12.5 0.149038462 1.887175325 1.24 -22 -21 -21.5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2R 24766540 24766545 + 2R_24766540_24766545_+ 0.716442218 0.725403433 0.720922825 0.006336525 CG3894 FBtr0300130 24766264 24766750 2R + 24766485 24766599 3'utr CG3894 FlyBase G19119.1 TTGTAATTTCTGTAGATATATTTTATACTTTGGTTCTAGTTACCAATACACTCTTTACCTGGACGACCTATGTTGTAGATCATAATCCTCGCCATCGTTTGTGTATGTGTGGATC 217 24766539 0.805256069 16 209 1532 0.967479675 1.677606953 0.227642276 0.124423963 0.227642276 217 4 4 238 2R:24766485-24766599 6 CG3894 FBtr0300130 24766264 24766750 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2R + 24766513 24766642 3'utr CG3894 FlyBase G14540.2 TTTGGTTCTAGTTACCAATACACTCTTTACCTGGACGACCTATGTTGTAGATCATAATCCTCGCCATCGTTTGTGTATGTGTGGATCACCAACACCAGCGGAGGTCTCCTGGGCGCCCCGACTTTTAGCG 146 24766539 0.803524858 15 141 962 0.969026549 1.641474111 0.230088496 0.431506849 0.632743363 146 3 4 219 2R:24766513-24766642 6 148 1170 FBgn0035059 104 8.213333333 12.5 1.423076923 18.01948052 11.84 1 1 1 0.2 dme-miR-304-5p 6mer2-7 GAGATT 2R 24788051 24788056 - 2R_24788051_24788056_- 0.993661496 0.921188444 0.95742497 0.05124622 Reg-5 FBtr0072427|FBtr0305671 24788006|24788006 24788287|24788287 2R - 24788007 24788096 3'utr Reg-5 FlyBase G26491.1 AATTTTATTTATTCGCGTGCATTAGTCGTAAGATCACATAGAGATTCTTGAGTAATAAACCGCATGATGATTATCATTGTTACGAACGTA 57 24788075 0.874270557 13 56 401 0.970588235 1.819543936 0.235294118 0.175438596 0.308823529 57 2 0 66 2R:24788007-24788096 6 Reg-5 FBtr0305671|FBtr0072427 24788006|24788006 24788287|24788287 GAGATT 6mer2-7 dme-miR-304-5p 2R - 24788011 24788090 3'utr Reg-5 FlyBase G20034.1 ATTTATTCGCGTGCATTAGTCGTAAGATCACATAGAGATTCTTGAGTAATAAACCGCATGATGATTATCATTGTTACGAA 42 24788058 0.873442876 9 41 300 0.984126984 1.792391689 0.111111111 0.30952381 0.53968254 42 1 0 62 2R:24788011-24788090 6 24.5 1171 FBgn0015801 337.6666667 24.48 36.89333333 0.072556762 1.000816993 0.664076617 19 2 10.5 0.2 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 24788132 24788138 - 2R_24788132_24788138_- 0.798394205 0.798603046 0.798498626 0.000147644 Reg-5 FBtr0072427|FBtr0305671 24788006|24788006 24788287|24788287 2R - 24788111 24788284 3'utr Reg-5 FlyBase G26492.1 CGCGGTCAGAGGATCCGCAGGCCTAGACCTAAGTCCTTGTGTGAATGTGATAGAGCAGATGAGGAGATCCTGCATCATAGAGTGCGAGAGTGAACGTGTGAGTCTTCTAGTTGTAGCCGTTTGAGGAGTTTTCTTGAATGCACTTGAGCTTTAATGGAATTTCGTATCGTATTC 597 24788140 0.82031255 30 572 4538 0.957983193 2.136086097 0.256302521 0.162479062 0.299719888 597 26 4 684 2R:24788111-24788284 7 Reg-5 FBtr0305671|FBtr0072427 24788006|24788006 24788287|24788287 AGCTTTA 7mer-A1 dme-miR-79-3p 2R - 24788113 24788271 3'utr Reg-5 FlyBase G20035.1 TCCGCAGGCCTAGACCTAAGTCCTTGTGTGAATGTGATAGAGCAGATGAGGAGATCCTGCATCATAGAGTGCGAGAGTGAACGTGTGAGTCTTCTAGTTGTAGCCGTTTGAGGAGTTTTCTTGAATGCACTTGAGCTTTAATGGAATTTCGTATCGTAT 366 24788140 0.849085515 30 360 2638 0.983576642 2.731588765 0.28649635 0.366120219 0.576642336 366 9 0 539 2R:24788113-24788271 7 353 1172 FBgn0015801 337.6666667 24.48 36.89333333 1.045409674 14.41993464 9.568124322 2 2 2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2R 24886342 24886349 + 2R_24886342_24886349_+ 0.632914817 0.633110568 0.633012693 0.000138452 NKAIN FBtr0301847|FBtr0301847|FBtr0301847|FBtr0305056|FBtr0305056|FBtr0305056|FBtr0301849|FBtr0301849|FBtr0301849|FBtr0301848|FBtr0301848|FBtr0301848 24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969 24886945|24886945|24886945|24888615|24888615|24888615|24886945|24886945|24886945|24886945|24886945|24886945 2R + 24886246 24886382 5'utr NKAIN FlyBase G19151.1 ATTCAGATACGTGCGATCAGTAGAGACTTTCCTCGAATTGTGATAGAAGGCGTGGAAAGTCGTGACAGAATGCAAGCCTAACAATTTTATGTTGATCTGTGATAACTGAAAACAAATATGAACGACAAACGATAATT 474 24886341 0.985875411 25 442 3704 0.93554007 1.729974286 0.418118467 0.175105485 0.318815331 474 28 9 537 2R:24886246-24886382 8 NKAIN FBtr0301848|FBtr0301848|FBtr0301848|FBtr0301849|FBtr0301849|FBtr0301849|FBtr0305056|FBtr0305056|FBtr0305056|FBtr0301847|FBtr0301847|FBtr0301847 24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969 24886945|24886945|24886945|24886945|24886945|24886945|24888615|24888615|24888615|24886945|24886945|24886945 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 24886254 24886407 5'utr NKAIN FlyBase G14567.1 ACGTGCGATCAGTAGAGACTTTCCTCGAATTGTGATAGAAGGCGTGGAAAGTCGTGACAGAATGCAAGCCTAACAATTTTATGTTGATCTGTGATAACTGAAAACAAATATGAACGACAAACGATAATTTGAAAAACGAAAATGTCACAAAATC 317 24886341 0.985235473 28 290 2370 0.910714286 1.569267478 0.390625 0.32278481 0.522321429 316 30 10 408 2R:24886254-24886407 8 277.5 1173 FBgn0085442 1933.686667 63.05666667 96.30333333 0.143508255 4.40080351 2.881520197 1 1 1 0.2 dme-miR-263a-5p 6mer3-8 GTGCCA 2R 24886886 24886891 + 2R_24886886_24886891_+ 0.920106582 0.955797731 0.937952157 0.025237419 NKAIN FBtr0301847|FBtr0305056|FBtr0301849|FBtr0301848 24885969|24885969|24885969|24885969 24886945|24888615|24886945|24886945 2R + 24886857 24886919 5'utr NKAIN FlyBase G19157.1 ATTTAGCCATGCGAATTGTGCGTAGACTGGTGCCAATTCTCGAAGAGATTGAACGCGTTTCCA 111 24886879 0.718578461 11 105 670 0.939849624 1.795880017 0.15037594 0.144144144 0.285714286 111 7 1 125 2R:24886857-24886919 6 NKAIN FBtr0301848|FBtr0301849|FBtr0305056|FBtr0301847 24885969|24885969|24885969|24885969 24886945|24886945|24888615|24886945 GTGCCA 6mer3-8 dme-miR-263a-5p 2R + 24886744 24886912 5'utr NKAIN FlyBase G14570.1 CGTATAGAAATGTTAAGCCTAGTATTAAGCTTGAGGCCACAAAACGCAAGAGCAGAGCAGATCTAAATCCATTTAGCGTAGACACTATTTACTGTTTTAGATAGATCCCTCATATTTAGCCATGCGAATTGTGCGTAGACTGGTGCCAATTCTCGAAGAGATTGAACGC 129 24886880 0.979568581 24 119 828 0.927884615 1.984527313 0.158653846 0.395348837 0.625 129 14 1 193 2R:24886744-24886912 6 100 1174 FBgn0085442 1933.686667 63.05666667 96.30333333 0.051714687 1.585875139 1.038385656 7 6 6.5 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2R 24888583 24888589 + 2R_24888583_24888589_+ 0.669310131 0.671763213 0.670536672 0.001734604 NKAIN FBtr0305056|FBtr0301851|FBtr0343497 24885969|24888369|24887234 24888615|24888615|24888615 2R + 24888573 24888610 3'utr NKAIN FlyBase G19161.1 CTGTCGTTTTACCAAAGTGCCTTTGTAAATAAATACTT 9 24888595 0.652906795 5 8 65 0.916666667 0.740362689 0.083333333 0.333333333 0.5 9 0 1 11 2R:24888573-24888610 7 NKAIN FBtr0343497|FBtr0301851|FBtr0305056 24887234|24888369|24885969 24888615|24888615|24888615 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 24888565 24888599 3'utr NKAIN FlyBase G14573.1 GTAAGTTTCTGTCGTTTTACCAAAGTGCCTTTGTA 21 24888594 0.744534432 7 20 176 0.9375 1.477121255 0.15625 0.476190476 0.65625 21 2 0 30 2R:24888565-24888599 7 15 1175 FBgn0085442 1933.686667 63.05666667 96.30333333 0.007757203 0.237881271 0.155757848 -12 -11 -11.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-m8 CTGTGAT 2R 24909999 24910005 + 2R_24909999_24910005_+ 0.649473587 0.661582051 0.655527819 0.008562002 NaCP60E FBtr0333816|FBtr0333816|FBtr0333816|FBtr0333815|FBtr0333815|FBtr0333815 24905200|24905200|24905200|24907305|24907305|24907305 24920265|24920265|24920265|24920265|24920265|24920265 2R + 24909971 24910022 3'utr NaCP60E FlyBase G19162.1 TTAGCATCTCAAATGAGATACGCAAAATCTGTGATCAAATCCACGCCCCCTT 12 24909998 0.977141563 3 9 65 0.769230769 0.698970004 0 0.083333333 0.153846154 12 2 1 10 2R:24909971-24910022 7 NaCP60E FBtr0333816|FBtr0333816|FBtr0333816|FBtr0333815|FBtr0333815|FBtr0333815 24905200|24905200|24905200|24907305|24907305|24907305 24920265|24920265|24920265|24920265|24920265|24920265 CTGTGAT 7mer-m8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 24909984 24910012 3'utr NaCP60E FlyBase G14574.1 TGAGATACGCAAAATCTGTGATCAAATCC 6 24909998 0.954754139 2 5 23 0.833333333 0.698970004 0.166666667 0 0 6 1 0 5 2R:24909984-24910012 7 8.5 1176 FBgn0085434 365.8266667 3.443333333 5.213333333 0.023235048 2.468538238 1.630434783 1 1 1 0.2 dme-miR-283-5p 6mer3-8 TGATAT 2R 2494782 2494787 - 2R_2494782_2494787_- 0.992504016 0.936401142 0.964452579 0.039670741 MFS17 FBtr0301780|FBtr0301779|FBtr0301781|FBtr0334936|FBtr0334935 2494740|2494740|2494740|2494740|2494740 2521422|2494825|2494825|2515854|2494965 2R - 2494753 2494807 3'utr MFS17 FlyBase G19280.1 TAAAACTGTTATACCAAATTTGATATATGTTATATGTTCGCTGTTATGATAATAA 18 2494788 0.711138201 7 17 147 0.964285714 1.130333768 0.178571429 0.388888889 0.607142857 18 0 1 27 2R:2494753-2494807 6 MFS17 FBtr0334935|FBtr0334936|FBtr0301781|FBtr0301779|FBtr0301780 2494740|2494740|2494740|2494740|2494740 2494965|2515854|2494825|2494825|2521422 TGATAT 6mer3-8 dme-miR-283-5p 2R - 2494781 2494811 3'utr MFS17 FlyBase G14656.1 AAATTAAAACTGTTATACCAAATTTGATATA 10 2494788 0.67136309 4 10 77 1 1.230448921 0 0.4 0.647058824 10 0 0 17 2R:2494781-2494811 6 12 1177 FBgn0058263 777.1033333 67.95666667 103.9733333 0.015441962 0.176583117 0.115414209 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 24959960 24959965 - 2R_24959960_24959965_- 0.714108277 0.71253672 0.713322498 0.001111289 CG2765 FBtr0113119|FBtr0113119|FBtr0113119|FBtr0308687|FBtr0308687|FBtr0308687|FBtr0308686|FBtr0308686|FBtr0308686|FBtr0113118|FBtr0113118|FBtr0113118 24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839 24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846 2R - 24959930 24959996 3'utr CG2765 FlyBase G26547.2 AAATCCCACCAAAGGTGACCTGGATACCCGACTGTGAGTCCCTGGTTCGGCAACGAGGACTGCAGAG 41 24959951 0.916515296 7 39 190 0.93877551 1.361727836 0.265306122 0.170731707 0.306122449 41 2 1 46 2R:24959930-24959996 6 CG2765 FBtr0308686|FBtr0308686|FBtr0308686|FBtr0113118|FBtr0113118|FBtr0113118|FBtr0113119|FBtr0113119|FBtr0113119|FBtr0308687|FBtr0308687|FBtr0308687 24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839|24959839 24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846|24960846 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 24959932 24959993 3'utr CG2765 FlyBase G20073.1 TCCCACCAAAGGTGACCTGGATACCCGACTGTGAGTCCCTGGTTCGGCAACGAGGACTGCAG 30 24959951 0.947729707 9 25 147 0.830188679 1.166331422 0.471698113 0.466666667 0.698113208 30 7 2 44 2R:24959932-24959993 6 28.5 1178 FBgn0035087 3658.343333 190.7466667 291.4366667 0.007790412 0.149412834 0.097791401 -14 -14 -14 0.2 dme-miR-13b-2-5p 7mer-m1 TTGACGC 2R 24991134 24991140 - 2R_24991134_24991140_- 0.829550636 0.819052902 0.824301769 0.007422995 zip FBtr0302575 24990946 24991607 2R - 24991025 24991163 stop_codon zip FlyBase G26564.1 TTAGATGGAGAGGATTCTGCCAATTGACGCGTTAATTATTAGATGAAGAAAAAGTTGAATCGCAGGAAGAAGGTGATGATGAAGAGCAAAATAAACGATTATATTTAATGTTTCTTTTATATAATTTCTCTGTTATTTT 31 24991140 0.972058515 12 31 191 1 1.591064607 0.230769231 0.193548387 0.358974359 31 0 0 39 2R:24991025-24991163 7 zip FBtr0302575 24990946 24991607 TTGACGC 7mer-m1 dme-miR-13b-2-5p 2R - 24991057 24991170 stop_codon zip FlyBase G20095.1 TGAATCATTAGATGGAGAGGATTCTGCCAATTGACGCGTTAATTATTAGATGAAGAAAAAGTTGAATCGCAGGAAGAAGGTGATGATGAAGAGCAAAATAAACGATTATATTTA 27 24991140 0.909120612 11 26 136 0.972222222 1.544068044 0.444444444 0.259259259 0.444444444 27 1 0 35 2R:24991057-24991170 7 15 1179 FBgn0265434 6756.406667 120.88 185.8533333 0.002220115 0.124090007 0.080708803 0 0 0 0.2 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 25073733 25073738 - 2R_25073733_25073738_- 0.999996907 0.635696778 0.817846842 0.257599071 gol FBtr0300178 25073667 25074917 2R - 25073723 25073752 3'utr gol FlyBase G26605.1 TGAAACAAGACCATGCTGTGCTAGACACCT 25 25073739 0.704674315 3 25 85 1 1.477121255 0 0.2 0.333333333 25 0 0 30 2R:25073723-25073752 6 gol FBtr0300178 25073667 25074917 GCTGTG 6mer2-7 dme-miR-1008-3p 2R - 25073723 25073760 3'utr gol FlyBase G20122.1 ACCAACTTTGAAACAAGACCATGCTGTGCTAGACACCT 23 25073731 0.817010128 3 21 89 0.897435897 0.942008053 0.025641026 0.47826087 0.692307692 23 1 3 35 2R:25073723-25073760 6 24 1180 FBgn0004919 407.4766667 15.40666667 23.45 0.058899078 1.5577672 1.023454158 1 -7 -3 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 25073939 25073946 - 2R_25073939_25073946_- 0.579864407 0.597923783 0.588894095 0.012769924 gol FBtr0300178 25073667 25074917 2R - 25073929 25073988 3'utr gol FlyBase G26606.1 CATTTTTATGTACTTACATTATTATTGCTTAATTCGTTTGATTGCATTTATTTTTCAATT 165 25073947 0.815672286 8 163 2036 0.987068966 2.359835482 0.409482759 0.303030303 0.504310345 165 3 0 229 2R:25073929-25073988 8 gol FBtr0300178 25073667 25074917 TGCATTTA 8mer-A1 dme-miR-277-3p 2R - 25073890 25073987 3'utr gol FlyBase G20123.1 ATTTTTATGTACTTACATTATTATTGCTTAATTCGTTTGATTGCATTTATTTTTCAATTGTTTTTATAGCTCATACATAAATTATTTATATTCCATTT 103 25073947 0.992849771 9 102 1278 0.985915493 2.146128036 0.35915493 0.281553398 0.478873239 103 2 0 140 2R:25073890-25073987 8 126 1181 FBgn0004919 407.4766667 15.40666667 23.45 0.30922016 8.178277802 5.373134328 1 1 1 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 2R 25074028 25074033 - 2R_25074028_25074033_- 0.535370174 0.437250658 0.486310416 0.069380964 gol FBtr0300178 25073667 25074917 2R - 25074000 25074085 3'utr gol FlyBase G26607.1 AATCGCAGCCAGCGCATATTGTGAATCAATGACTGCTGTAATATCACAGGTGCCAAAGTATTTGCTTTTAGTTTTTTATATTAAAT 47 25074053 0.880427914 13 45 297 0.950819672 1.286306739 0.180327869 0.276595745 0.442622951 47 1 2 58 2R:25074000-25074085 6 gol FBtr0300178 25073667 25074917 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 25074012 25074169 3'utr gol FlyBase G20124.1 AAGCTGTAGAAAAGGTAATGGTAAATGCAATAAATATAGCAAGATCACCGACTGTGTTGCTAGTCACCCATAGACGGCTACACAAATCGCAGCCAGCGCATATTGTGAATCAATGACTGCTGTAATATCACAGGTGCCAAAGTATTTGCTTTTAGTTT 63 25074049 0.814913105 23 62 377 0.978947368 1.968482949 0.189473684 0.428571429 0.621052632 63 2 0 93 2R:25074012-25074169 6 12 1182 FBgn0004919 407.4766667 15.40666667 23.45 0.029449539 0.7788836 0.511727079 20 16 18 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2R 25074104 25074110 - 2R_25074104_25074110_- 0.751182769 0.696446027 0.723814398 0.038704762 gol FBtr0300178|FBtr0306330 25073667|25072625 25074917|25074917 2R - 25074086 25074153 3'utr gol FlyBase G26607.2 AATGGTAAATGCAATAAATATAGCAAGATCACCGACTGTGTTGCTAGTCACCCATAGACGGCTACACA 30 25074113 0.816100577 11 27 161 0.885714286 1.014240439 0 0.166666667 0.285714286 30 2 2 31 2R:25074086-25074153 7 gol FBtr0300178|FBtr0306330 25073667|25072625 25074917|25074917 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R - 25074012 25074169 3'utr gol FlyBase G20124.1 AAGCTGTAGAAAAGGTAATGGTAAATGCAATAAATATAGCAAGATCACCGACTGTGTTGCTAGTCACCCATAGACGGCTACACAAATCGCAGCCAGCGCATATTGTGAATCAATGACTGCTGTAATATCACAGGTGCCAAAGTATTTGCTTTTAGTTT 63 25074114 0.814913105 23 62 377 0.978947368 1.968482949 0.189473684 0.428571429 0.621052632 63 2 0 93 2R:25074012-25074169 7 20 1183 FBgn0004919 407.4766667 15.40666667 23.45 0.049082565 1.298139334 0.852878465 3 4 3.5 0.2 dme-miR-34-5p 6mer2-7 ACTGCC 2R 3900374 3900379 - 2R_3900374_3900379_- 0.997871845 0.975988092 0.986929969 0.015474113 uex FBtr0302226 3900283 3900785 2R - 3900355 3900412 3'utr uex FlyBase G19352.1 TTAGAAGGGCTAAACTCGATGTTAAAAAAATAAACTGCCTGTTTAACTGTATTCCTTA 21 3900371 0.928757019 9 17 173 0.869565217 1 0.043478261 0.095238095 0.173913043 21 2 1 20 2R:3900355-3900412 6 uex FBtr0302226 3900283 3900785 ACTGCC 6mer2-7 dme-miR-34-5p 2R - 3900327 3900436 3'utr uex FlyBase G14709.1 AGTTAATCTTCCTTAGAAATGGTTTTAGAAGGGCTAAACTCGATGTTAAAAAAATAAACTGCCTGTTTAACTGTATTCCTTATTAAACTTAAATGTGTTTGTGAACACAG 20 3900372 0.850428671 11 17 157 1 1.505149978 0.09375 0.5 0.6875 20 0 0 32 2R:3900327-3900436 6 11.5 1184 FBgn0262124 3391.336667 116.7833333 178.7433333 0.003390993 0.098472956 0.064338064 -8 -7 -7.5 0.2 dme-miR-79-3p 7mer-m8 TAGCTTT 2R 3900593 3900599 - 2R_3900593_3900599_- 0.617013227 0.620049708 0.618531468 0.00214713 uex FBtr0302226 3900283 3900785 2R - 3900577 3900671 3'utr uex FlyBase G19353.1 ACAATTTTTATACTATACCATAGGTTTTCCCATATTAATTATATTCCTAAACATCTTAAACATAAAAAAAAATAGCTTTTCCAAAACTGTGTATG 17 3900599 0.983686956 7 13 101 0.833333333 0.875061263 0 0.058823529 0.111111111 17 2 1 15 2R:3900577-3900671 7 uex FBtr0302226 3900283 3900785 TAGCTTT 7mer-m8 dme-miR-79-3p 2R - 3900565 3900608 3'utr uex FlyBase G14711.1 AAAAAAAAATAGCTTTTCCAAAACTGTGTATGAATTTATATATA 7 3900594 0.981558222 3 6 46 0.888888889 0.903089987 0 0.285714286 0.444444444 7 1 0 8 2R:3900565-3900608 7 9 1185 FBgn0262124 3391.336667 116.7833333 178.7433333 0.002653821 0.077065791 0.050351528 0 -5 -2.5 0.2 dme-miR-305-5p 6mer3-8 AGTACA 2R 4564541 4564546 + 2R_4564541_4564546_+ 0.999703323 0.999996568 0.999849946 0.000207394 Stlk FBtr0111111|FBtr0308810 4564500|4564500 4565281|4564987 2R + 4564514 4564553 3'utr Stlk FlyBase G12823.1 TGTTTTTCTGATCACTTCGGTGCCTTTAGTACAGAATCTA 19 4564539 0.599846623 7 19 150 1 1.431363764 0.407407407 0.315789474 0.518518519 19 0 0 27 2R:4564514-4564553 6 Stlk FBtr0111111|FBtr0308810 4564500|4564500 4565281|4564987 AGTACA 6mer3-8 dme-miR-305-5p 2R + 4564519 4564555 3'utr Stlk FlyBase G9785.1 TTCTGATCACTTCGGTGCCTTTAGTACAGAATCTACA 13 4564540 0.626645518 5 12 104 0.954545455 1.322219295 0 0.461538462 0.681818182 13 1 0 21 2R:4564519-4564555 6 14.5 1186 FBgn0046692 309.34 20.17666667 30.87 0.04687399 0.718651908 0.469711694 2 1 1.5 0.2 dme-miR-276a-3p 6mer2-7 GTTCCT 2R 4673515 4673520 + 2R_4673515_4673520_+ 0.589919032 0.999844766 0.794881899 0.289861313 CG17883 FBtr0111291|FBtr0334995|FBtr0111292|FBtr0334996 4673477|4673477|4673085|4673477 4673639|4673639|4673639|4673639 2R + 4673497 4673583 3'utr CG17883 FlyBase G12882.1 ATATCGACATTTAAATTTGTTCCTTATACCGCGGTATAATCACATTCTCCCGAAATTCTGTGTTTTGGTGAAGACCTTATTTTAATA 26 4673514 0.747296779 11 23 240 0.941176471 1.505149978 0.147058824 0.192307692 0.382352941 26 2 0 32 2R:4673497-4673583 6 CG17883 FBtr0334996|FBtr0111292|FBtr0334995|FBtr0111291 4673477|4673085|4673477|4673477 4673639|4673639|4673639|4673639 GTTCCT 6mer2-7 dme-miR-276a-3p 2R + 4673505 4673533 3'utr CG17883 FlyBase G9828.1 ATTTAAATTTGTTCCTTATACCGCGGTAT 7 4673521 0.708839233 4 6 65 0.9 0.954242509 0.2 0.428571429 0.6 7 1 0 9 2R:4673505-4673533 6 9 1187 FBgn0040005 878.32 65.69666667 100.4666667 0.010246835 0.136993252 0.089581951 1 -6 -2.5 0.2 dme-bantam-3p 6mer3-8 TGATCT 2R 4817380 4817385 - 2R_4817380_4817385_- 0.99998184 0.999735149 0.999858494 0.000174443 CG17528 FBtr0111277 4815424 4817448 2R - 4817356 4817429 3'utr CG17528 FlyBase G19500.1 AAAAAAAGCAACTTTCACTCTTAAACGACGAACTTTTGTATTTCTGATCTAAAAATGCTTTTATATTAGCCCTA 38 4817386 0.863462485 11 37 295 1 1.591064607 0.128205128 0.054054054 0.102564103 37 0 0 39 2R:4817356-4817429 6 CG17528 FBtr0111277|FBtr0111274 4815424|4817259 4817448|4817448 TGATCT 6mer3-8 dme-bantam-3p 2R - 4817349 4817428 3'utr CG17528 FlyBase G14816.1 AAAAAAGCAACTTTCACTCTTAAACGACGAACTTTTGTATTTCTGATCTAAAAATGCTTTTATATTAGCCCTAATTTATT 26 4817386 0.984012037 10 24 207 0.976190476 1.311753861 0.119047619 0.423076923 0.642857143 26 0 1 41 2R:4817349-4817428 6 18 1188 FBgn0261387 730.0966667 30.65666667 47.04333333 0.02465427 0.587147983 0.382625948 1 1 1 0.2 dme-miR-92b-3p 7mer-A1 TGCAATA 2R 5117426 5117432 - 2R_5117426_5117432_- 0.773135585 0.774231227 0.773683406 0.000774706 gus FBtr0309850|FBtr0309846|FBtr0309848|FBtr0309851 5117211|5117211|5116988|5117211 5117662|5117662|5117662|5117662 2R - 5117356 5117628 NoAnnotation G19516.1 TTTTTGCTGCATGTGATGAAAGCAGCAAATACTAATTGTGTTAGATTATAATAGTATTAGATCAATGTTTGTCTGTCCTCCAACAGGAAAATCATAGGTATACAATTCGTAATAATACTTTACTTAAGCTATAAAGATTGATTGTATATTAAGAAGCATTCAAATAATAGTATGTACACGGAATGACATCTCATCTTGCAATAAATTGGAGAATCGAGTTTCTTCATGTAACATTATTTAAAAACTATACTCACTTCGTGTTATATAAAAAGC 279 5117445 0.969244809 47 268 2013 0.964285714 1.846337112 0.090659341 0.222222222 0.403846154 279 9 4 351 2R:5117356-5117628 7 gus FBtr0309846|FBtr0309852|FBtr0309849|FBtr0309850|FBtr0309847|FBtr0309848|FBtr0309851 5117211|5117330|5117330|5117211|5117392|5116988|5117211 5117662|5117662|5117662|5117662|5117662|5117662|5117662 TGCAATA 7mer-A1 dme-miR-92b-3p 2R - 5117401 5117629 3'utr gus FlyBase G14831.1 ATTTTTGCTGCATGTGATGAAAGCAGCAAATACTAATTGTGTTAGATTATAATAGTATTAGATCAATGTTTGTCTGTCCTCCAACAGGAAAATCATAGGTATACAATTCGTAATAATACTTTACTTAAGCTATAAAGATTGATTGTATATTAAGAAGCATTCAAATAATAGTATGTACACGGAATGACATCTCATCTTGCAATAAATTGGAGAATCGAGTTTCTTCATG 177 5117445 0.982343248 37 170 1275 0.960784314 2.389166084 0.094117647 0.299435028 0.51372549 177 10 0 245 2R:5117401-5117629 7 91 1189 FBgn0026238 600.2866667 48.80333333 74.76 0.151594238 1.864626733 1.217228464 13 13 13 0.2 dme-miR-1003-3p 8mer-A1 ATGTGAGA 2R 5154671 5154678 + 2R_5154671_5154678_+ 0.643222363 0.643565397 0.64339388 0.000242538 Atf6 FBtr0086080|FBtr0086079 5154029|5154029 5154756|5154756 2R + 5154646 5154696 3'utr Atf6 FlyBase G12959.1 TAAGTTTTATTAATTAAAACAGCCTATGTGAGAGATGTAGTTTTGTAAAAT 11 5154671 0.976339266 4 11 78 1 1.113943352 0.230769231 0.181818182 0.307692308 11 0 0 13 2R:5154646-5154696 8 Atf6 FBtr0086079|FBtr0086080 5154029|5154029 5154756|5154756 ATGTGAGA 8mer-A1 dme-miR-1003-3p 2R + 5154656 5154696 3'utr Atf6 FlyBase G9888.1 TAATTAAAACAGCCTATGTGAGAGATGTAGTTTTGTAAAAT 8 5154673 0.986396505 4 7 54 0.916666667 1.041392685 0.25 0.375 0.583333333 8 1 0 11 2R:5154656-5154696 8 9.5 1190 FBgn0033010 930.9533333 36.95333333 56.66 0.010204593 0.257081003 0.167666784 0 -2 -1 0.2 dme-miR-999-3p 6mer3-8 AGTTAA 2R 5295929 5295934 + 2R_5295929_5295934_+ 0.99919708 0.999956625 0.999576853 0.000537048 d4 FBtr0086082|FBtr0335258|FBtr0086083|FBtr0111115 5295893|5295893|5295893|5295893 5295965|5295965|5295965|5295965 2R + 5295925 5295954 3'utr d4 FlyBase G12979.1 TATAAGTTAATCTTCTCATAAATATAAAAA 14 5295932 0.829688727 6 11 112 0.785714286 0.740362689 0 0 0 14 2 1 11 2R:5295925-5295954 6 d4 FBtr0086083|FBtr0111115|FBtr0086082|FBtr0335258 5295893|5295893|5295893|5295893 5295965|5295965|5295965|5295965 AGTTAA 6mer3-8 dme-miR-999-3p 2R + 5295917 5295956 3'utr d4 FlyBase G9903.1 TCACCAATTATAAGTTAATCTTCTCATAAATATAAAAAAC 14 5295932 0.706228405 5 13 122 0.882352941 1.176091259 0.058823529 0.214285714 0.352941176 14 2 0 15 2R:5295917-5295956 6 14 1191 FBgn0033015 779.7666667 52.91333333 81.00666667 0.017954089 0.264583596 0.172825282 -3 -3 -3 0.2 dme-miR-34-5p 8mer-A1 CACTGCCA 2R 5447156 5447163 + 2R_5447156_5447163_+ 0.678335656 0.678384822 0.678360239 3.47E-05 laccase2 FBtr0299918|FBtr0301063 5446975|5446975 5447974|5447298 2R + 5447113 5447171 3'utr laccase2 FlyBase G13033.1 ATTTAAAACGCACAATGCACTGTTTTTATTTAATAATTTTAAACACTGCCAATGTCCAA 17 5447150 0.981495538 9 16 121 1 1.230448921 0.058823529 0 0 17 0 0 17 2R:5447113-5447171 8 laccase2 FBtr0301063|FBtr0299918 5446975|5446975 5447298|5447974 CACTGCCA 8mer-A1 dme-miR-34-5p 2R + 5447114 5447168 3'utr laccase2 FlyBase G9945.1 TTTAAAACGCACAATGCACTGTTTTTATTTAATAATTTTAAACACTGCCAATGTC 8 5447142 0.983091335 8 8 63 1 1.176091259 0.2 0.5 0.733333333 8 0 0 15 2R:5447114-5447168 8 9 1192 FBgn0259247 554.2366667 21.22 32.31 0.01623855 0.424128181 0.278551532 6 14 10 0.2 dme-miR-276a-3p 6mer3-8 AGTTCC 2R 5609670 5609675 + 2R_5609670_5609675_+ 0.527676826 0.981181867 0.754429347 0.320676532 CG17508 FBtr0307172 5609514 5609994 2R + 5609632 5609738 3'utr CG17508 FlyBase G13043.1 CTGCATATATCAGGAACTCATTCTAAGGATTGGCTTTCAGTTCCCAGGAACCCTATTATATAGAAATTAGAATTGACCAAAGAATTTATTAAATTGCAAGAAAACCG 49 5609661 0.915205379 17 46 354 0.925925926 1.698970004 0.074074074 0.102040816 0.185185185 49 4 0 50 2R:5609632-5609738 6 CG17508 FBtr0307172 5609514 5609994 AGTTCC 6mer3-8 dme-miR-276a-3p 2R + 5609638 5609724 3'utr CG17508 FlyBase G9956.1 ATATCAGGAACTCATTCTAAGGATTGGCTTTCAGTTCCCAGGAACCCTATTATATAGAAATTAGAATTGACCAAAGAATTTATTAAA 30 5609661 0.877027844 14 30 207 1 1.653212514 0.111111111 0.333333333 0.555555556 30 0 0 45 2R:5609638-5609724 6 15 1193 FBgn0039970 517.7666667 53.29333333 81.50333333 0.028970579 0.281461096 0.184041552 9 9 9 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 2R 5609707 5609714 + 2R_5609707_5609714_+ 0.578207192 0.634768393 0.606487793 0.039994808 CG17508 FBtr0307172 5609514 5609994 2R + 5609632 5609738 3'utr CG17508 FlyBase G13043.1 CTGCATATATCAGGAACTCATTCTAAGGATTGGCTTTCAGTTCCCAGGAACCCTATTATATAGAAATTAGAATTGACCAAAGAATTTATTAAATTGCAAGAAAACCG 49 5609704 0.915205379 17 46 354 0.925925926 1.698970004 0.074074074 0.102040816 0.185185185 49 4 0 50 2R:5609632-5609738 8 CG17508 FBtr0307172 5609514 5609994 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 5609638 5609724 3'utr CG17508 FlyBase G9956.1 ATATCAGGAACTCATTCTAAGGATTGGCTTTCAGTTCCCAGGAACCCTATTATATAGAAATTAGAATTGACCAAAGAATTTATTAAA 30 5609704 0.877027844 14 30 207 1 1.653212514 0.111111111 0.333333333 0.555555556 30 0 0 45 2R:5609638-5609724 8 18 1194 FBgn0039970 517.7666667 53.29333333 81.50333333 0.034764695 0.337753315 0.220849863 3 3 3 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 2R 5609762 5609767 + 2R_5609762_5609767_+ 0.931129912 0.958394244 0.944762078 0.019278771 CG17508 FBtr0307172 5609514 5609994 2R + 5609751 5609793 3'utr CG17508 FlyBase G13044.1 AAATAGACAATTGTGTTTGGAGTGGGCATGCCCAACGTATTTT 10 5609761 0.761410487 7 10 61 1 1.041392685 0.181818182 0.1 0.181818182 10 0 0 11 2R:5609751-5609793 6 CG17508 FBtr0307172 5609514 5609994 TGTGTT 6mer3-8 dme-miR-317-3p 2R + 5609734 5609777 3'utr CG17508 FlyBase G9957.1 AACCGAAACAAAGTGTGAAATAGACAATTGTGTTTGGAGTGGGC 5 5609754 0.962587751 3 5 27 1 0.903089987 0 0.2 0.5 5 0 0 8 2R:5609734-5609777 6 5.5 1195 FBgn0039970 517.7666667 53.29333333 81.50333333 0.010622546 0.103202402 0.067481903 1 8 4.5 0.2 dme-miR-14-3p 6mer2-7 AGACTG 2R 5656095 5656100 + 2R_5656095_5656100_+ 0.99916533 0.9996586 0.999411965 0.000348816 CG1344 FBtr0331967 5655809 5656778 2R + 5656046 5656228 3'utr CG1344 FlyBase G13063.1 TTCTCGTTCGCACTCCCACCAGCTGATTGTAATGGGTAGTCGGAGAACTAGACTGTAAAGTTTTCTCTTGTTTGTTCCTTTTTTTGTCCTAACAAATAAATGCTTGCTTACTTTTGTATTATAAAAAATCGACACCTCGGTATTTTTGTTTTTGATTAAGACTTAGTAATAGAATTGTAATCG 107 5656094 0.890763443 19 99 787 0.929133858 1.594760753 0.220472441 0.177570093 0.307086614 107 7 2 118 2R:5656046-5656228 6 CG1344 FBtr0331967 5655809 5656778 AGACTG 6mer2-7 dme-miR-14-3p 2R + 5656075 5656117 3'utr CG1344 FlyBase G9977.1 TAATGGGTAGTCGGAGAACTAGACTGTAAAGTTTTCTCTTGTT 22 5656101 0.766819584 4 21 134 1 1.477121255 0.1 0.227272727 0.433333333 22 0 0 30 2R:5656075-5656117 6 41 1196 FBgn0027507 843.1966667 42.83333333 65.52 0.048624481 0.957198444 0.625763126 1 -6 -2.5 0.2 dme-miR-308-3p 8mer-m1 CTGTGATT 2R 5656725 5656732 + 2R_5656725_5656732_+ 0.384318104 0.385484623 0.384901364 0.00082484 CG1344 FBtr0331967 5655809 5656778 2R + 5656694 5656737 3'utr CG1344 FlyBase G13066.1 CAGGTTATATGAGATTGTTTTTGAAAGCCCTCTGTGATTTCTTA 13 5656732 0.803696331 3 13 109 1 1.255272505 0.111111111 0.307692308 0.5 13 0 0 18 2R:5656694-5656737 8 CG1344 FBtr0331967 5655809 5656778 CTGTGATT 8mer-m1 dme-miR-308-3p 2R + 5656715 5656736 3'utr CG1344 FlyBase G9980.1 TGAAAGCCCTCTGTGATTTCTT 6 5656732 0.611158745 2 6 43 1 0.903089987 0 0.166666667 0.375 6 0 0 8 2R:5656715-5656736 8 7.5 1197 FBgn0027507 843.1966667 42.83333333 65.52 0.008894722 0.175097276 0.114468864 -7 -7 -7 0.2 dme-miR-283-5p 7mer-A1 GATATTA 2R 5677561 5677567 - 2R_5677561_5677567_- 0.7828206 0.782911783 0.782866192 6.45E-05 scaf FBtr0086061|FBtr0086060 5676748|5676748 5677716|5677716 2R - 5677559 5677606 3'utr scaf FlyBase G19676.1 ATTGCAATTTCGTTGGAGCTCAAAATGGAGGGCATTCCCGATATTATC 10 5677572 0.730026474 6 10 64 1 1.113943352 0 0.2 0.384615385 10 0 0 13 2R:5677559-5677606 7 scaf FBtr0086061|FBtr0086060 5676748|5676748 5677716|5677716 GATATTA 7mer-A1 dme-miR-283-5p 2R - 5677559 5677590 3'utr scaf FlyBase G14949.1 AGCTCAAAATGGAGGGCATTCCCGATATTATC 5 5677581 0.856020247 4 5 27 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2R:5677559-5677590 7 4.5 1198 FBgn0033033 687.87 27.26 41.96666667 0.006541934 0.165077036 0.107227959 5 14 9.5 0.2 dme-miR-190-5p 6mer3-8 ACATAT 2R 5704961 5704966 + 2R_5704961_5704966_+ 0.77430535 0.89321277 0.83375906 0.084080229 vlc FBtr0307530|FBtr0300503|FBtr0086039|FBtr0086040|FBtr0307531|FBtr0086041|FBtr0307532|FBtr0300502 5704918|5704918|5704918|5704918|5704918|5704918|5704918|5704918 5705439|5705439|5705439|5705439|5705439|5705439|5705439|5705439 2R + 5704905 5705002 stop_codon vlc FlyBase G13102.1 AGCAACGGAAGTTAAATAATGCTCACTGCGAATAGCAACTCATGCTTTCTATTTATACATATATTTTTAACTAACACACGTGTACCCCACAAAGGCAT 30 5704947 0.97739004 10 29 196 1 1.602059991 0.05 0.3 0.475 30 0 0 40 2R:5704905-5705002 6 vlc FBtr0307532|FBtr0300502|FBtr0307531|FBtr0086041|FBtr0086039|FBtr0086040|FBtr0307530|FBtr0300503 5704918|5704918|5704918|5704918|5704918|5704918|5704918|5704918 5705439|5705439|5705439|5705439|5705439|5705439|5705439|5705439 ACATAT 6mer3-8 dme-miR-190-5p 2R + 5704800 5705017 stop_codon vlc FlyBase G10014.1 CGTCGCGAGGCTATGACCGCAGCGGCCAAATTGAATCCCATAAATGTTGATGCCGACCCGGACGTGCCGGGAATAATTGGCGATAGTTGTGCTAATCCTAGCGTTAGCAACGGAAGTTAAATAATGCTCACTGCGAATAGCAACTCATGCTTTCTATTTATACATATATTTTTAACTAACACACGTGTACCCCACAAAGGCATACTTAAATTTATAGA 27 5704985 0.981427546 16 23 169 0.886363636 1.290034611 0.136363636 0.444444444 0.659090909 27 4 1 39 2R:5704800-5705017 6 5 1199 FBgn0259978 569 27.35666667 41.84333333 0.008787346 0.182770805 0.119493348 14 -24 -5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 2R 5705043 5705048 + 2R_5705043_5705048_+ 0.992607659 0.996515137 0.994561398 0.002762949 vlc FBtr0307530|FBtr0300503|FBtr0086039|FBtr0086040|FBtr0307531|FBtr0086041|FBtr0307532|FBtr0300502 5704918|5704918|5704918|5704918|5704918|5704918|5704918|5704918 5705439|5705439|5705439|5705439|5705439|5705439|5705439|5705439 2R + 5705019 5705063 3'utr vlc FlyBase G13103.1 ATTTCTAGTTGAATTAATCATTTACTAGTCCCAACTAAAATTATT 18 5705040 0.702970362 6 18 137 1 1.414973348 0 0.277777778 0.5 18 0 0 26 2R:5705019-5705063 6 vlc FBtr0307532|FBtr0300502|FBtr0307531|FBtr0086041|FBtr0086039|FBtr0086040|FBtr0307530|FBtr0300503 5704918|5704918|5704918|5704918|5704918|5704918|5704918|5704918 5705439|5705439|5705439|5705439|5705439|5705439|5705439|5705439 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 2R + 5705033 5705057 3'utr vlc FlyBase G10015.1 TAATCATTTACTAGTCCCAACTAAA 10 5705040 0.639672593 4 9 53 1 1.113943352 0.076923077 0.3 0.461538462 10 0 0 13 2R:5705033-5705057 6 14 1200 FBgn0259978 569 27.35666667 41.84333333 0.024604569 0.511758255 0.334581375 3 3 3 0.2 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 5705205 5705210 + 2R_5705205_5705210_+ 0.996377093 0.996665999 0.996521546 0.000204283 vlc FBtr0307530|FBtr0300503|FBtr0086039|FBtr0086040|FBtr0307531|FBtr0086041|FBtr0307532|FBtr0300502 5704918|5704918|5704918|5704918|5704918|5704918|5704918|5704918 5705439|5705439|5705439|5705439|5705439|5705439|5705439|5705439 2R + 5705071 5705236 3'utr vlc FlyBase G13104.1 AGCTCCTCACTGAAATCTGTCACAAGGCGTCAAATATCTAGGAGATAACGAAGTATTGTCACCAATTGCGACTTACCTAAAGTTGTTCATAAATATTGCCTTATCCGCGAAAGATTTCGCTAATTAATCAATTTGCTGTGCACATTATGTAATTGAAAATTAAAAT 144 5705203 0.806513121 24 142 1075 0.983783784 1.782950133 0.108108108 0.215277778 0.389189189 144 1 2 182 2R:5705071-5705236 6 vlc FBtr0307532|FBtr0300502|FBtr0307531|FBtr0086041|FBtr0086039|FBtr0086040|FBtr0307530|FBtr0300503 5704918|5704918|5704918|5704918|5704918|5704918|5704918|5704918 5705439|5705439|5705439|5705439|5705439|5705439|5705439|5705439 GCTGTG 6mer2-7 dme-miR-1008-3p 2R + 5705157 5705254 3'utr vlc FlyBase G10017.1 TCATAAATATTGCCTTATCCGCGAAAGATTTCGCTAATTAATCAATTTGCTGTGCACATTATGTAATTGAAAATTAAAATTACTTGATTACATATAAA 62 5705203 0.987724126 10 56 500 0.896226415 1.500602351 0.066037736 0.435483871 0.669811321 62 9 2 95 2R:5705157-5705254 6 79 1201 FBgn0259978 569 27.35666667 41.84333333 0.13884007 2.887778725 1.887994902 2 2 2 0.2 dme-miR-252-5p 7mer-m8 GTACTTA 2R 5706257 5706263 - 2R_5706257_5706263_- 0.585738312 0.585886276 0.585812294 0.000104652 ap FBtr0086058|FBtr0086059 5706200|5706200 5707932|5707932 2R - 5706196 5706456 3'utr ap FlyBase G19684.1 TATGTAACTAATATTTATTGCCCAAATTTAATAGTTAGAGACGAATTTAGTTTAGAACAGACTATACAATAAAGTCCATATGTACATGTAGTATTACGGTAAAGTAATAGCTTCGCTCAAGCATACGACCAGGTTCGTAAGCTATTAATACGAAACTGTAATTATAATCAAATCAGTAAACACTGGAAGATTTGTACTTACAAATAGTTAACTCATAAGTCTTACCATAGAAGCTTAAATAAAACGTATTCAAGCAAAAAA 822 5706264 0.770457601 64 783 6073 0.951612903 2.196820744 0.069556452 0.177615572 0.318548387 822 43 5 944 2R:5706196-5706456 7 ap FBtr0086058|FBtr0086059 5706200|5706200 5707932|5707932 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 5706195 5706449 3'utr ap FlyBase G14954.1 CTAATATTTATTGCCCAAATTTAATAGTTAGAGACGAATTTAGTTTAGAACAGACTATACAATAAAGTCCATATGTACATGTAGTATTACGGTAAAGTAATAGCTTCGCTCAAGCATACGACCAGGTTCGTAAGCTATTAATACGAAACTGTAATTATAATCAAATCAGTAAACACTGGAAGATTTGTACTTACAAATAGTTAACTCATAAGTCTTACCATAGAAGCTTAAATAAAACGTATTCAAGCAAAAAAA 615 5706264 0.831704405 58 582 4319 0.950854701 2.04630002 0.071581197 0.356097561 0.576923077 615 39 7 890 2R:5706195-5706449 7 323 1202 FBgn0000099 2 0.113333333 0.183333333 161.5 2850 1761.818182 1 1 1 0.2 dme-miR-2b-2-5p 7mer-A1 TGAAGAA 2R 5706506 5706512 - 2R_5706506_5706512_- 0.823349026 0.823343511 0.823346269 3.89E-06 ap FBtr0086058|FBtr0086059 5706200|5706200 5707932|5707932 2R - 5706490 5706825 3'utr ap FlyBase G19685.2 AGTCTAGTTTACACGTATGTTCTACGAGGAACGGACCGATTGTTCCTATGAGAGCTATAGGTTTTACCATATGTATATGCATGCATTACTTCAGCTCCATCTCTTTTTGATTCATAAACGTATAATGGTTTGAGAGTAAACATTTTGTGGCGTATATAGTTCAAGTTTACATATTTAGAGTACGGTGCCCAAGACGCGCTTTAAAAATATTGAAAACGGGTTGTTAATGAAGTCCCATATGTATAATTGTCTAGGTACATGGATATTGTTAATATATTATTATTTTTATTTAAAGAGCTCTCAACAATATGTATGAAGAAATCTGCGTATATCAAC 1223 5706512 0.882054457 86 1159 8167 0.95379538 1.56880324 0.238283828 0.188216039 0.345214521 1222 32 38 1445 2R:5706490-5706825 7 ap FBtr0086058|FBtr0086059 5706200|5706200 5707932|5707932 TGAAGAA 7mer-A1 dme-miR-2b-2-5p 2R - 5706490 5706820 3'utr ap FlyBase G14955.2 AGTTTACACGTATGTTCTACGAGGAACGGACCGATTGTTCCTATGAGAGCTATAGGTTTTACCATATGTATATGCATGCATTACTTCAGCTCCATCTCTTTTTGATTCATAAACGTATAATGGTTTGAGAGTAAACATTTTGTGGCGTATATAGTTCAAGTTTACATATTTAGAGTACGGTGCCCAAGACGCGCTTTAAAAATATTGAAAACGGGTTGTTAATGAAGTCCCATATGTATAATTGTCTAGGTACATGGATATTGTTAATATATTATTATTTTTATTTAAAGAGCTCTCAACAATATGTATGAAGAAATCTGCGTATATCAAC 816 5706512 0.881105855 68 768 5229 0.941415785 1.586212104 0.260374288 0.378676471 0.587469487 816 43 29 1157 2R:5706490-5706820 7 517.5 1203 FBgn0000099 2 0.113333333 0.183333333 258.75 4566.176471 2822.727273 0 0 0 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 2R 5756100 5756105 + 2R_5756100_5756105_+ 0.997624132 0.999986155 0.998805144 0.001670257 l(2)09851 FBtr0335269 5755985 5756327 2R + 5755967 5756111 stop_codon l(2)09851 FlyBase G13126.1 TTCGCACGATCAGTGTCTGACCTCGCTATTATTCTGTTTCTTAACGTTAAAAAAATTAAACCGATCTTGTGTCTTTGGGTTTTAAGAATTTTTTACTGGACTTATTTAAACACAAAAAGAAAGTGGAACACTATTGACTTTTATG 41 5756107 0.792305763 16 39 366 0.958333333 1.662757832 0.166666667 0.170731707 0.291666667 41 2 0 46 2R:5755967-5756111 6 l(2)09851 FBtr0335269 5755985 5756327 TTGACT 6mer3-8 dme-miR-1012-3p 2R + 5756083 5756111 3'utr l(2)09851 FlyBase G10039.1 AAGAAAGTGGAACACTATTGACTTTTATG 10 5756107 0.561431005 2 10 73 1 1.176091259 0.466666667 0.3 0.533333333 10 0 0 15 2R:5756083-5756111 6 10 1204 FBgn0022288 410.3333333 32.80666667 50.73333333 0.024370431 0.304816094 0.197109067 -7 -7 -7 0.2 dme-miR-14-3p 7mer-m8 AAGACTG 2R 5772217 5772223 + 2R_5772217_5772223_+ 0.67179583 0.671795831 0.671795831 0 Gp210 FBtr0086044|FBtr0335270 5772199|5772199 5772492|5774324 2R + 5772194 5772238 stop_codon Gp210 FlyBase G13157.1 TAGTTAGTTGGATACGTAAATTAAAGACTGTCAGCAAACTGACTC 89 5772224 0.694120598 5 85 438 0.962264151 2.008600172 0.169811321 0.168539326 0.301886792 89 4 0 102 2R:5772194-5772238 7 Gp210 FBtr0335270|FBtr0086044 5772199|5772199 5774324|5772492 AAGACTG 7mer-m8 dme-miR-14-3p 2R + 5772134 5772242 stop_codon Gp210 FlyBase G10060.1 GTATATTTATGGACACCCTCGTTTGAACTCTTCAAACAGATCAGAAAACTCGACTAGCTTTAGTTAGTTGGATACGTAAATTAAAGACTGTCAGCAAACTGACTCGGGT 84 5772215 0.967086338 14 80 436 0.959016393 1.767155866 0.262295082 0.369047619 0.56557377 84 4 1 117 2R:5772134-5772242 7 80.5 1205 FBgn0266580 2948.146667 58.77 90.26 0.02730529 1.369746469 0.891867937 -7 2 -2.5 0.2 dme-miR-980-3p 6mer2-7 GCAGCT 2R 5772292 5772297 + 2R_5772292_5772297_+ 0.999212733 0.999908451 0.999560592 0.000492005 Gp210 FBtr0086044|FBtr0335270 5772199|5772199 5772492|5774324 2R + 5772256 5772339 3'utr Gp210 FlyBase G13158.1 ATATAAGATAAACTCAGGCATTTGTAATACTTATATGCAGCTTCTGTCCTTTAAAGTAAATTCTTCTCATCCTGACGCCAGAAA 67 5772297 0.914720795 14 65 580 0.974683544 1.58546073 0.075949367 0.164179104 0.291139241 67 1 1 77 2R:5772256-5772339 6 Gp210 FBtr0335270|FBtr0086044 5772199|5772199 5774324|5772492 GCAGCT 6mer2-7 dme-miR-980-3p 2R + 5772260 5772318 3'utr Gp210 FlyBase G10061.1 AAGATAAACTCAGGCATTTGTAATACTTATATGCAGCTTCTGTCCTTTAAAGTAAATTC 45 5772297 0.896308237 9 43 390 0.971014493 1.826074803 0.130434783 0.355555556 0.579710145 45 2 0 67 2R:5772260-5772318 6 49.5 1206 FBgn0266580 2948.146667 58.77 90.26 0.016790209 0.842266462 0.548415688 -5 -5 -5 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2R 5774799 5774805 - 2R_5774799_5774805_- 0.658539363 0.816514618 0.737526991 0.111705335 ZnT41F FBtr0086053|FBtr0086055|FBtr0086056|FBtr0086054 5774774|5774774|5774774|5774774 5774960|5774960|5774960|5774960 2R - 5774788 5774832 3'utr ZnT41F FlyBase G19917.1 TACTGTTAAACATCCAGTGACATTACCCCAAAGAAAATATATTCT 26 5774809 0.779912539 5 25 91 1 1.531478917 0.029411765 0.153846154 0.352941176 26 0 0 34 2R:5774788-5774832 7 ZnT41F FBtr0086056|FBtr0086054|FBtr0086053|FBtr0086055 5774774|5774774|5774774|5774774 5774960|5774960|5774960|5774960 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 5774792 5774825 3'utr ZnT41F FlyBase G15123.1 AAACATCCAGTGACATTACCCCAAAGAAAATATA 12 5774810 0.770891941 5 11 41 0.941176471 1.204119983 0 0.333333333 0.529411765 12 1 0 16 2R:5774792-5774825 7 17.5 1207 FBgn0025693 1109.333333 64.26 98.72666667 0.01577524 0.272331155 0.177257073 4 5 4.5 0.2 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 6011784 6011789 + 2R_6011784_6011789_+ 0.973867119 0.973135989 0.973501554 0.000516966 Src42A FBtr0335275|FBtr0335276 6011610|6011610 6012500|6012795 2R + 6011767 6011874 3'utr Src42A FlyBase G13169.1 CCGTTTGGTGCCCGTTGGCTGTGGTTGTCTAGGTACCGATACGATTCATGTTATTAGCATTTAAGGTAAATAGTTGCTGAGGTGGAATGCAATTTCAAATGACGTTCC 221 6011782 0.831153906 18 217 1827 0.985663082 1.962211439 0.508960573 0.20361991 0.369175627 221 2 2 275 2R:6011767-6011874 6 Src42A FBtr0335275|FBtr0335276 6011610|6011610 6012500|6012795 GCTGTG 6mer2-7 dme-miR-1008-3p 2R + 6011766 6011808 3'utr Src42A FlyBase G10068.1 CCCGTTTGGTGCCCGTTGGCTGTGGTTGTCTAGGTACCGATAC 145 6011782 0.824277264 7 143 1173 0.991416309 2.36361198 0.467811159 0.420689655 0.639484979 145 2 0 231 2R:6011766-6011808 6 176 1208 FBgn0264959 2196.93 83.74333333 128.84 0.080111792 2.101659834 1.366035393 2 2 2 0.2 dme-miR-965-3p 7mer-m8 TACGCTT 2R 6011934 6011940 + 2R_6011934_6011940_+ 0.618177042 0.6155421 0.616859571 0.001863156 Src42A FBtr0335275|FBtr0335276 6011610|6011610 6012500|6012795 2R + 6011893 6011961 3'utr Src42A FlyBase G13170.1 TTGTTTATTATGACAAACATATTGGCACTTGGTCGGATTTATACGCTTTGACATCCTTGTCGTATATTT 22 6011933 0.98826728 12 21 194 0.96 1.380211242 0.2 0.090909091 0.2 22 1 0 24 2R:6011893-6011961 7 Src42A FBtr0335275|FBtr0335276 6011610|6011610 6012500|6012795 TACGCTT 7mer-m8 dme-miR-965-3p 2R + 6011902 6011956 3'utr Src42A FlyBase G10070.1 ATGACAAACATATTGGCACTTGGTCGGATTTATACGCTTTGACATCCTTGTCGTA 20 6011941 0.679819241 6 18 170 0.944444444 1.531478917 0.083333333 0.5 0.722222222 20 2 0 34 2R:6011902-6011956 7 15.5 1209 FBgn0264959 2196.93 83.74333333 128.84 0.0070553 0.18508936 0.120304253 1 -7 -3 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 6020435 6020441 - 2R_6020435_6020441_- 0.454757948 0.370563404 0.412660676 0.059534502 Strica FBtr0335289 6020309 6021344 2R - 6020362 6020466 3'utr Strica FlyBase G19970.1 TTATCAGGATCACTAGCCGAGTCGATCTAGTCTTTTTAATTGTCTTGCCTTTTTTCATCTATATATGTAAATCTTGAAAAATCGTCCCAGCAATTGTGACCAATA 33 6020434 0.986366973 10 33 289 1 1.602059991 0.05 0.151515152 0.3 33 0 0 40 2R:6020362-6020466 7 Strica FBtr0335289 6020309 6021344 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R - 6020426 6020453 3'utr Strica FlyBase G15165.1 TAGCCGAGTCGATCTAGTCTTTTTAATT 9 6020434 0.635192538 3 7 74 0.818181818 0.954242509 0.090909091 0.222222222 0.363636364 9 2 0 9 2R:6020426-6020453 7 19 1210 FBgn0033051 1511.393333 79.10666667 121.57 0.012571182 0.240182033 0.156288558 -7 -7 -7 0.2 dme-miR-282-5p 7mer-A1 GAGGCTA 2R 6021100 6021106 - 2R_6021100_6021106_- 0.814584696 0.814071239 0.814327968 0.000363099 Strica FBtr0335289|FBtr0086028 6020309|6020866 6021344|6021344 2R - 6021063 6021130 3'utr Strica FlyBase G19973.1 AAACTAAAGAGGCGGTAAAAGTGTGAGGCTAAATATTAAAAAAAAATTAGTCTGGGGTCGGAATTGTT 19 6021107 0.955825423 4 19 93 1 1.380211242 0.208333333 0.263157895 0.416666667 19 0 0 24 2R:6021063-6021130 7 Strica FBtr0335289|FBtr0086028 6020309|6020866 6021344|6021344 GAGGCTA 7mer-A1 dme-miR-282-5p 2R - 6021066 6021122 3'utr Strica FlyBase G15167.1 GAGGCGGTAAAAGTGTGAGGCTAAATATTAAAAAAAAATTAGTCTGGGGTCGGAATT 22 6021107 0.824764868 3 21 94 1 1.51851394 0.242424242 0.380952381 0.606060606 21 0 0 33 2R:6021066-6021122 7 12.5 1211 FBgn0033051 1511.393333 79.10666667 121.57 0.008270514 0.158014495 0.10282142 1 1 1 0.2 dme-miR-965-3p 8mer-A1 TACGCTTA 2R 6026298 6026305 - 2R_6026298_6026305_- 0.623740348 0.625104551 0.624422449 0.000964706 SCAP FBtr0086027 6026271 6026669 2R - 6026282 6026383 3'utr SCAP FlyBase G19985.1 ACATAGTGTCTTAAAGCGCCTCAGCCTAATATAAAATGACTAAATGTTAAAATAAATACATTATTTATTAGAATCACCTACGCTTAATATTCAGAAAGAATA 54 6026305 0.868138262 9 51 371 0.950819672 1.286306739 0.131147541 0.12962963 0.229508197 54 1 2 58 2R:6026282-6026383 8 SCAP FBtr0086027 6026271 6026669 TACGCTTA 8mer-A1 dme-miR-965-3p 2R - 6026283 6026322 3'utr SCAP FlyBase G15175.1 TATTTATTAGAATCACCTACGCTTAATATTCAGAAAGAAT 18 6026305 0.854438311 3 18 131 1 1.414973348 0.153846154 0.444444444 0.615384615 18 0 0 26 2R:6026283-6026322 8 27.5 1212 FBgn0033052 1236.103333 29.14666667 44.57333333 0.022247331 0.943504117 0.616960814 0 0 0 0.2 dme-miR-305-3p 7mer-A1 TGTGCCA 2R 6082223 6082229 - 2R_6082223_6082229_- 0.428042792 0.520563114 0.474302953 0.065421732 Ars2 FBtr0310666 6080826 6084356 2R - 6082151 6082245 5'utr Ars2 FlyBase G20016.1 AGTTTCTTACTAAGACTGTGCCACTGAGTGACGAAGAGATTAAGAATCTTGGAGCCAAGGACGCCGAAACGGAGGTGGAAAAGTTTGTGCAAGCG 23 6082227 0.971078171 9 20 127 0.884615385 1.06069784 0.153846154 0.130434783 0.230769231 23 2 1 23 2R:6082151-6082245 7 Ars2 FBtr0310666 6080826 6084356 TGTGCCA 7mer-A1 dme-miR-305-3p 2R - 6082189 6082245 5'utr Ars2 FlyBase G15192.1 AGTTTCTTACTAAGACTGTGCCACTGAGTGACGAAGAGATTAAGAATCTTGGAGCCA 10 6082227 0.9801368 4 9 67 0.9375 1.176091259 0.125 0.5 0.6875 10 1 0 15 2R:6082189-6082245 7 11.5 1213 FBgn0033062 1878.093333 71.69666667 110.3966667 0.006123231 0.160397973 0.104169812 -2 -2 -2 0.2 dme-miR-1003-3p 6mer2-7 TGTGAG 2R 6082370 6082375 - 2R_6082370_6082375_- 0.980721682 0.985872482 0.983297082 0.003642166 Ars2 FBtr0310666 6080826 6084356 2R - 6082356 6082403 5'utr Ars2 FlyBase G20017.1 AGTGCACTCAGTAGACTATTACAACCATTGTGAGTATCCATATGAAGA 16 6082376 0.709641842 5 15 104 0.95 0.977723605 0.2 0.1875 0.35 16 0 1 19 2R:6082356-6082403 6 Ars2 FBtr0310666 6080826 6084356 TGTGAG 6mer2-7 dme-miR-1003-3p 2R - 6082352 6082410 5'utr Ars2 FlyBase G15193.1 TGCGTATAGTGCACTCAGTAGACTATTACAACCATTGTGAGTATCCATATGAAGACGAG 15 6082385 0.91753155 7 12 87 0.913043478 1.021189299 0.086956522 0.5 0.695652174 14 1 1 21 2R:6082352-6082410 6 9 1214 FBgn0033062 1878.093333 71.69666667 110.3966667 0.004792094 0.125528848 0.081524201 1 10 5.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 6082803 6082808 - 2R_6082803_6082808_- 0.815032377 0.789657617 0.802344997 0.017942693 Ars2 FBtr0310666|FBtr0310666|FBtr0310666 6080826|6080826|6080826 6084356|6084356|6084356 2R - 6082769 6082841 5'utr Ars2 FlyBase G20019.1 TTGCTGGGGTCTAAACAATCAGCGACTGAGAGACTGTGAAATGGGAGCTATCGTCAATCGGGACCTCAGCCGA 35 6082805 0.78144351 9 34 121 0.956521739 1.643452676 0.173913043 0.228571429 0.413043478 35 2 0 44 2R:6082769-6082841 6 Ars2 FBtr0310666|FBtr0310666|FBtr0310666 6080826|6080826|6080826 6084356|6084356|6084356 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 6082784 6082829 5'utr Ars2 FlyBase G15196.1 AAACAATCAGCGACTGAGAGACTGTGAAATGGGAGCTATCGTCAAT 21 6082804 0.780265715 4 20 66 1 1.579783597 0.368421053 0.55 0.763157895 20 0 0 38 2R:6082784-6082829 6 23 1215 FBgn0033062 1878.093333 71.69666667 110.3966667 0.012246463 0.320795946 0.208339624 -3 -4 -3.5 0.2 dme-miR-92b-3p 8mer-m1 GTGCAATT 2R 6091023 6091030 - 2R_6091023_6091030_- 0.596667865 0.592278399 0.594473132 0.003103845 EcR FBtr0302439|FBtr0086008|FBtr0086010|FBtr0086012 6087871|6090417|6090417|6090417 6092587|6092587|6092587|6092587 2R - 6091010 6091045 3'utr EcR FlyBase G20035.1 CTTTCTACTTGAATTGTGCAATTTTTTACTTTTACT 14 6091032 0.732402923 6 14 147 1 1.230448921 0 0.214285714 0.352941176 14 0 0 17 2R:6091010-6091045 8 EcR FBtr0086012|FBtr0086008|FBtr0086010|FBtr0302439 6090417|6090417|6090417|6087871 6092587|6092587|6092587|6092587 GTGCAATT 8mer-m1 dme-miR-92b-3p 2R - 6090996 6091041 3'utr EcR FlyBase G15202.2 CTACTTGAATTGTGCAATTTTTTACTTTTACTACTAATCCTAATTT 11 6091032 0.928711765 4 8 120 0.875 0.669006781 0.0625 0.363636364 0.5625 11 0 2 14 2R:6090996-6091041 8 10.5 1216 FBgn0000546 917.5266667 23.27333333 35.89 0.011443809 0.451160126 0.292560602 2 2 2 0.2 dme-miR-1003-3p 6mer3-8 ATGTGA 2R 6209910 6209915 - 2R_6209910_6209915_- 0.999426563 0.99959708 0.999511822 0.000120562 l(2)k14710 FBtr0305967|FBtr0086000 6209780|6209780 6210093|6210093 2R - 6209885 6209930 3'utr l(2)k14710 FlyBase G20069.1 GAGCTTGGCTGTATTATGTGAATGAACCATTCTGCTATCTTCCTTA 21 6209908 0.867402234 7 18 156 0.88 1.041392685 0.52 0.19047619 0.32 21 2 1 22 2R:6209885-6209930 6 l(2)k14710 FBtr0086000|FBtr0305967 6209780|6209780 6210093|6210093 ATGTGA 6mer3-8 dme-miR-1003-3p 2R - 6209882 6209930 3'utr l(2)k14710 FlyBase G15222.1 GAGCTTGGCTGTATTATGTGAATGAACCATTCTGCTATCTTCCTTAATC 19 6209925 0.740576723 5 19 158 1 1.361727836 0.217391304 0.210526316 0.347826087 19 0 0 23 2R:6209882-6209930 6 17 1217 FBgn0021847 147.6666667 5.836666667 8.94 0.115124153 2.912621359 1.901565996 -7 10 1.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 6626425 6626431 - 2R_6626425_6626431_- 0.71504041 0.714376041 0.714708226 0.000469802 Vha16-1 FBtr0086152|FBtr0086152|FBtr0086152|FBtr0086150|FBtr0086150|FBtr0086150|FBtr0086153|FBtr0086153|FBtr0086153|FBtr0086151|FBtr0086151|FBtr0086151 6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240 6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469 2R - 6626359 6626544 3'utr Vha16-1 FlyBase G20121.3 ACACACATACAAAATGTAACTAAGTCCTACGTTTATTTTTAATTATTGTTCAATTCTAAGAATAATATATTAAAAATTAATAATAATAAATTATATATATAATTATGATTTTTTGTGATAAGAACAGATGGTAATGCAAACAATTACGGTATTGATATACATAATATATACAGAATATATATATAT 408 6626433 0.77285983 31 378 3488 0.928131417 1.509010399 0.223819302 0.159313725 0.295687885 408 22 13 452 2R:6626359-6626544 7 Vha16-1 FBtr0086151|FBtr0086151|FBtr0086151|FBtr0086153|FBtr0086153|FBtr0086153|FBtr0086150|FBtr0086150|FBtr0086150|FBtr0086152|FBtr0086152|FBtr0086152 6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240 6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 6626357 6626457 3'utr Vha16-1 FlyBase G15273.1 AAATTATATATATAATTATGATTTTTTGTGATAAGAACAGATGGTAATGCAAACAATTACGGTATTGATATACATAATATATACAGAATATATATATATAT 263 6626433 0.710250446 20 237 2224 0.92 1.423875743 0.245333333 0.30418251 0.512 263 18 12 345 2R:6626357-6626457 7 283 1218 FBgn0262736 36576.97333 1582.373333 2438.476667 0.007737108 0.178845279 0.116056062 2 2 2 0.2 dme-miR-277-3p 6mer3-8 TGCATT 2R 6626860 6626865 - 2R_6626860_6626865_- 0.711678293 0.721606344 0.716642318 0.007020156 Vha16-1 FBtr0086152|FBtr0086150|FBtr0086153|FBtr0086151 6625240|6625240|6625240|6625240 6627469|6627469|6627469|6627469 2R - 6626803 6626934 3'utr Vha16-1 FlyBase G20123.1 CGTTAAACAAAAAGAAAAAATTGTAAAGAAATCAACAACCAACAATTGTCAGAAGAAACTTTGTACATTTGCATTGAGCCTGACGCGGCTGCAACCAATTCAGATCAACAAATTTAGCGAAAGGGCCAAAAC 722 6626860 0.968736552 19 714 4007 0.990453461 2.919078092 0.054892601 0.13434903 0.254176611 722 8 0 830 2R:6626803-6626934 6 Vha16-1 FBtr0086151|FBtr0086153|FBtr0086150|FBtr0086152 6625240|6625240|6625240|6625240 6627469|6627469|6627469|6627469 TGCATT 6mer3-8 dme-miR-277-3p 2R - 6626803 6626984 3'utr Vha16-1 FlyBase G15274.1 TGTTTTTTCCATTATTATTATTAAATAATGTTTAGTGTATATGTAAAGTTCGTTAAACAAAAAGAAAAAATTGTAAAGAAATCAACAACCAACAATTGTCAGAAGAAACTTTGTACATTTGCATTGAGCCTGACGCGGCTGCAACCAATTCAGATCAACAAATTTAGCGAAAGGGCCAAAAC 342 6626860 0.971976736 17 331 1876 0.965073529 2.243038049 0.051470588 0.394736842 0.619485294 342 17 2 525 2R:6626803-6626984 6 505.5 1219 FBgn0262736 36576.97333 1582.373333 2438.476667 0.01382017 0.31945685 0.207301553 -5 -5 -5 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 2R 6642578 6642583 - 2R_6642578_6642583_- 0.969729268 0.999232968 0.984481118 0.020862266 Fmo-2 FBtr0086148 6642416 6642703 2R - 6642543 6642600 3'utr Fmo-2 FlyBase G20143.1 ACGGATTATAACTCAGATGTGTTAATTAATATTTTATAAGAACAATGTAAATCAAAGT 16 6642574 0.98556447 10 15 149 0.944444444 1.230448921 0.277777778 0.125 0.222222222 16 1 0 17 2R:6642543-6642600 6 Fmo-2 FBtr0086148 6642416 6642703 TGTGTT 6mer3-8 dme-miR-317-3p 2R - 6642517 6642599 3'utr Fmo-2 FlyBase G15286.1 CGGATTATAACTCAGATGTGTTAATTAATATTTTATAAGAACAATGTAAATCAAAGTATGTTTTGAACGATTAATTCAAAACG 14 6642575 0.990922515 8 13 135 0.952380952 1.301029996 0.238095238 0.357142857 0.571428571 14 1 0 20 2R:6642517-6642599 6 13 1220 FBgn0033079 393.3166667 28.71 43.87 0.033052248 0.452803901 0.296330066 -9 -8 -8.5 0.2 dme-bantam-3p 6mer3-8 TGATCT 2R 6660081 6660086 + 2R_6660081_6660086_+ 0.571618476 0.83417318 0.702895828 0.185654209 sced FBtr0086110|FBtr0336663 6659979|6659979 6660624|6660326 2R + 6660055 6660098 3'utr sced FlyBase G13327.1 ATTTATGTTGTAGTTTCTTGTGAATGTGATCTGATTAGTTCGAC 48 6660075 0.768618275 9 44 517 0.945454545 1.414973348 0.145454545 0.125 0.236363636 48 2 1 52 2R:6660055-6660098 6 sced FBtr0086110|FBtr0336663 6659979|6659979 6660624|6660326 TGATCT 6mer3-8 dme-bantam-3p 2R + 6660006 6660104 3'utr sced FlyBase G10179.1 ATGTTTAACACTTCGCTGTGGACACAAACTGCTTTTTAACCATTTCGCTATTTATGTTGTAGTTTCTTGTGAATGTGATCTGATTAGTTCGACAAGTTG 42 6660075 0.964592412 12 39 419 0.93442623 1.755874856 0.131147541 0.380952381 0.573770492 42 4 0 57 2R:6660006-6660104 6 42.5 1221 FBgn0013732 116.0133333 4.383333333 6.713333333 0.366337203 9.69581749 6.330685204 6 6 6 0.2 dme-miR-2535b-3p 6mer3-8 CCGTGA 2R 6660562 6660567 + 2R_6660562_6660567_+ 0.970468601 0.919302395 0.944885498 0.036179967 sced FBtr0086110 6659979 6660624 2R + 6660534 6660581 3'utr sced FlyBase G13331.1 AAGATAGCATAACCAATGCTGAACTGTACCGTGACTAAACCATAAGCT 16 6660558 0.962489818 5 16 84 1 1.255272505 0.055555556 0.0625 0.166666667 16 0 0 18 2R:6660534-6660581 6 sced FBtr0086110 6659979 6660624 CCGTGA 6mer3-8 dme-miR-2535b-3p 2R + 6660538 6660582 3'utr sced FlyBase G10182.1 TAGCATAACCAATGCTGAACTGTACCGTGACTAAACCATAAGCTT 15 6660558 0.892305244 3 15 78 1 1.301029996 0 0.266666667 0.45 15 0 0 20 2R:6660538-6660582 6 15.5 1222 FBgn0013732 116.0133333 4.383333333 6.713333333 0.133605333 3.536121673 2.308838133 4 4 4 0.2 dme-miR-995-5p 6mer3-8 AATTCG 2R 6667666 6667671 + 2R_6667666_6667671_+ 0.999227192 0.669574402 0.834400797 0.23309973 Adf1 FBtr0086112|FBtr0086113|FBtr0086111|FBtr0330252 6667376|6667376|6667376|6667439 6668085|6668085|6668085|6668085 2R + 6667584 6667734 3'utr Adf1 FlyBase G13339.1 TAACGCGTAATGATACTTCCCCACGCCCATGTAGACAAACATATATATTTATATGCTTAGTTGACCCCATGATCGGTGATTTAATTCGCGCCCAGTTCTCAGCTCTGTACAAAAAATGCGATTGAAAATAGCGATTCTAGAATTATGAGTA 77 6667665 0.898760895 22 72 491 0.966292135 1.633468456 0.08988764 0.116883117 0.235955056 77 2 1 86 2R:6667584-6667734 6 Adf1 FBtr0086112|FBtr0086113|FBtr0086111|FBtr0330252 6667376|6667376|6667376|6667439 6668085|6668085|6668085|6668085 AATTCG 6mer3-8 dme-miR-995-5p 2R + 6667593 6667827 3'utr Adf1 FlyBase G10188.1 ATGATACTTCCCCACGCCCATGTAGACAAACATATATATTTATATGCTTAGTTGACCCCATGATCGGTGATTTAATTCGCGCCCAGTTCTCAGCTCTGTACAAAAAATGCGATTGAAAATAGCGATTCTAGAATTATGAGTAGCTTGTTAAAAGACCGTGGAAACACTTTATATGCAGCGTATTGTAAATTTTGACTACGATTTAGTTGTAATTTGCCATCGGGTCTTAGCTCTA 88 6667664 0.799933807 33 82 665 0.943089431 2.064457989 0.162601626 0.295454545 0.495934959 88 7 0 116 2R:6667593-6667827 6 28 1223 FBgn0000054 324.7166667 22.48333333 34.04 0.08622902 1.245366938 0.822561692 1 2 1.5 0.2 dme-miR-184-5p 7mer-m8 TGATAAG 2R 6670437 6670443 - 2R_6670437_6670443_- 0.658989482 0.658708434 0.658848958 0.000198768 Hsepi FBtr0086145|FBtr0302190 6670152|6670152 6671031|6671031 2R - 6670396 6670503 3'utr Hsepi FlyBase G20165.1 AGCGCTCCCACTCAATACTAACTGCCCAAATAACGATGCACGATAATAACGACTTATATATGATAAGCCTGTAATGTAATGTATTGTAGTGTATGCCACTCGAGAATA 17 6670458 0.971457255 10 16 99 0.947368421 1.255272505 0.263157895 0.117647059 0.210526316 17 1 0 18 2R:6670396-6670503 7 Hsepi FBtr0302190|FBtr0086145 6670152|6670152 6671031|6671031 TGATAAG 7mer-m8 dme-miR-184-5p 2R - 6670415 6670470 3'utr Hsepi FlyBase G15304.1 CGATGCACGATAATAACGACTTATATATGATAAGCCTGTAATGTAATGTATTGTAG 7 6670457 0.971527834 5 7 40 1 0.954242509 0.222222222 0.142857143 0.333333333 7 0 0 9 2R:6670415-6670470 7 6 1224 FBgn0033087 180.49 7.23 11.15666667 0.033242839 0.829875519 0.53779504 15 14 14.5 0.2 dme-bantam-3p 6mer3-8 TGATCT 2R 6670902 6670907 - 2R_6670902_6670907_- 0.904043076 0.826805087 0.865424081 0.054615514 Hsepi FBtr0086145|FBtr0302190 6670152|6670152 6671031|6671031 2R - 6670891 6670936 3'utr Hsepi FlyBase G20169.2 GCCGTGTCCTTTCCACAACCTCACACTCCTGATCTGGAAATAGTTT 45 6670907 0.75866488 6 40 233 0.910714286 1.008600172 0.035714286 0.222222222 0.375 45 1 4 51 2R:6670891-6670936 6 Hsepi FBtr0302190|FBtr0086145 6670152|6670152 6671031|6671031 TGATCT 6mer3-8 dme-bantam-3p 2R - 6670760 6670940 3'utr Hsepi FlyBase G15307.1 AAACGCCGTGTCCTTTCCACAACCTCACACTCCTGATCTGGAAATAGTTTCGTGTTTCTATTCTGTTATTTCCGCCCACGTATGTGTGCTGAAATCCTTATTAAGCTTGTCTATCTGGGCGCCTAGTGTTAAGCTGTTGTACCTTTACCTTTGATTGCATTATCAGATGTTGGCCTCGTCT 61 6670907 0.987093559 22 55 474 0.91954023 1.124938737 0.068965517 0.344262295 0.540229885 61 2 5 80 2R:6670760-6670940 6 34 1225 FBgn0033087 180.49 7.23 11.15666667 0.188376087 4.702627939 3.047505229 0 0 0 0.2 dme-miR-968-5p 6mer3-8 ACTACT 2R 6695218 6695223 - 2R_6695218_6695223_- 0.660856148 0.396104478 0.528480313 0.187207652 Mob4 FBtr0086141|FBtr0307075 6695112|6695112 6695593|6695593 2R - 6695191 6695251 3'utr Mob4 FlyBase G20179.1 TCCCCGTAAACTAAACTAAATTCCCTTGACTACTGGCAGCCAAAACACCAACACAGCTGTA 46 6695218 0.948241395 4 44 174 0.960784314 1.389166084 0.078431373 0.086956522 0.176470588 46 1 1 49 2R:6695191-6695251 6 Mob4 FBtr0086141|FBtr0307075 6695112|6695112 6695593|6695593 ACTACT 6mer3-8 dme-miR-968-5p 2R - 6695196 6695235 3'utr Mob4 FlyBase G15314.1 TAAATTCCCTTGACTACTGGCAGCCAAAACACCAACACAG 29 6695218 0.982620591 2 29 111 1 1.579783597 0.052631579 0.275862069 0.447368421 29 0 0 38 2R:6695196-6695235 6 37.5 1226 FBgn0259483 539.6566667 46.58333333 71.19333333 0.069488625 0.805008945 0.526734713 -5 -5 -5 0.2 dme-miR-33-5p 6mer2-7 AATGCA 2R 6695459 6695464 - 2R_6695459_6695464_- 0.994922692 0.994526315 0.994724503 0.000280297 Mob4 FBtr0086141|FBtr0307075 6695112|6695112 6695593|6695593 2R - 6695451 6695534 3'utr Mob4 FlyBase G20181.1 ATTTACCAATAGCTTGCAAGTTGGGTTGGCTCACCCTGACAGGGAAACGATTCCACGCGGACCCGACTCTAATGCAGATCTTGT 19 6695463 0.979619965 10 16 110 0.821428571 1.361727836 0.357142857 0.368421053 0.571428571 19 5 0 23 2R:6695451-6695534 6 Mob4 FBtr0086141|FBtr0307075 6695112|6695112 6695593|6695593 AATGCA 6mer2-7 dme-miR-33-5p 2R - 6695448 6695534 3'utr Mob4 FlyBase G15315.1 ATTTACCAATAGCTTGCAAGTTGGGTTGGCTCACCCTGACAGGGAAACGATTCCACGCGGACCCGACTCTAATGCAGATCTTGTATG 11 6695464 0.970090156 7 10 59 0.933333333 0.84509804 0.066666667 0.272727273 0.466666667 11 0 1 14 2R:6695448-6695534 6 6 1227 FBgn0259483 539.6566667 46.58333333 71.19333333 0.01111818 0.128801431 0.084277554 -1 0 -0.5 0.2 dme-miR-1012-3p 7mer-A1 TGACTAA 2R 6698613 6698619 + 2R_6698613_6698619_+ 0.823329398 0.819297286 0.821313342 0.002851125 Rab2 FBtr0086124|FBtr0336658 6698543|6698543 6699469|6698844 2R + 6698553 6698641 3'utr Rab2 FlyBase G13358.1 CGCAGATGCCCGATTGCAATTCTGGGATAGGCGCAGCCGCTTCTGTAAAAGCTACTTTAGTGACTAACTAATAGAAGGTAGTTGAAGGA 22 6698609 0.966296488 10 21 142 0.961538462 1.397940009 0.307692308 0.136363636 0.269230769 22 1 0 25 2R:6698553-6698641 7 Rab2 FBtr0086124|FBtr0336658 6698543|6698543 6699469|6698844 TGACTAA 7mer-A1 dme-miR-1012-3p 2R + 6698559 6698638 3'utr Rab2 FlyBase G10197.1 TGCCCGATTGCAATTCTGGGATAGGCGCAGCCGCTTCTGTAAAAGCTACTTTAGTGACTAACTAATAGAAGGTAGTTGAA 18 6698609 0.979494153 5 15 103 0.896551724 1.414973348 0.068965517 0.388888889 0.620689655 18 3 0 26 2R:6698559-6698638 7 11.5 1228 FBgn0014009 1265.866667 136.76 209.3033333 0.009084685 0.084088915 0.05494418 4 4 4 0.2 dme-miR-8-3p 6mer2-7 AGTATT 2R 6699354 6699359 + 2R_6699354_6699359_+ 0.999999655 0.679869524 0.839934589 0.226366235 Rab2 FBtr0086124 6698543 6699469 2R + 6699316 6699367 3'utr Rab2 FlyBase G13361.1 AGTGGTAACACGAAATGCTGCGATTCAATGATCAATTTAGTATTTTACGAAG 15 6699344 0.98412494 6 15 122 1 1.230448921 0.058823529 0.133333333 0.235294118 15 0 0 17 2R:6699316-6699367 6 Rab2 FBtr0086124 6698543 6699469 AGTATT 6mer2-7 dme-miR-8-3p 2R + 6699313 6699361 3'utr Rab2 FlyBase G10199.1 ACCAGTGGTAACACGAAATGCTGCGATTCAATGATCAATTTAGTATTTT 6 6699344 0.982868529 3 6 48 1 1.113943352 0.230769231 0.666666667 0.846153846 6 0 0 13 2R:6699313-6699361 6 4.5 1229 FBgn0014009 1265.866667 136.76 209.3033333 0.003554877 0.032904358 0.021499896 10 10 10 0.2 dme-miR-7-5p 6mer3-8 GTCTTC 2R 6700313 6700318 - 2R_6700313_6700318_- 0.997834049 0.998767727 0.998300888 0.000660226 CG45092 FBtr0344559|FBtr0344560|FBtr0344561 6700219|6700219|6699693 6705333|6705333|6705333 2R - 6700308 6700336 3'utr CG45092 FlyBase G20186.1 CAAACGGGTCCCTCAATTGTCTTCTTTAC 7 6700320 0.758022796 2 7 63 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 2R:6700308-6700336 6 CG45092 FBtr0344561|FBtr0344560|FBtr0344559 6699693|6700219|6700219 6705333|6705333|6705333 GTCTTC 6mer3-8 dme-miR-7-5p 2R - 6700305 6700338 3'utr CG45092 FlyBase G15320.1 TGCAAACGGGTCCCTCAATTGTCTTCTTTACAAA 6 6700320 0.874754292 2 6 52 1 0.954242509 0.444444444 0.5 0.666666667 6 0 0 9 2R:6700305-6700338 6 6.5 1230 FBgn0266525 326.5166667 7.77 11.99666667 0.0199071 0.836550837 0.541817171 2 2 2 0.2 dme-miR-1012-3p 8mer-A1 TTGACTAA 2R 6700463 6700470 - 2R_6700463_6700470_- 0.335716242 0.448677959 0.3921971 0.079876055 CG45092 FBtr0344559|FBtr0344560|FBtr0344561 6700219|6700219|6699693 6705333|6705333|6705333 2R - 6700450 6700499 3'utr CG45092 FlyBase G20187.1 AAGCTCTAGCCTGTAAGACTATACTTGACTTGACTAATCGTAGCTAAGTA 22 6700475 0.942897846 4 21 165 0.966666667 1.462397998 0 0.272727273 0.466666667 22 1 0 29 2R:6700450-6700499 8 CG45092 FBtr0344561|FBtr0344560|FBtr0344559 6699693|6700219|6700219 6705333|6705333|6705333 TTGACTAA 8mer-A1 dme-miR-1012-3p 2R - 6700452 6700499 3'utr CG45092 FlyBase G15321.1 AAGCTCTAGCCTGTAAGACTATACTTGACTTGACTAATCGTAGCTAAG 16 6700475 0.696402898 6 16 111 1 1.342422681 0 0.3125 0.5 16 0 0 22 2R:6700452-6700499 8 18 1231 FBgn0266525 326.5166667 7.77 11.99666667 0.055127354 2.316602317 1.500416782 5 5 5 0.2 dme-miR-305-5p 7mer-m8 AGTACAA 2R 6745772 6745778 + 2R_6745772_6745778_+ 0.397098471 0.630484276 0.513791373 0.165028682 phtf FBtr0086125 6745737 6746141 2R + 6745733 6745809 stop_codon phtf FlyBase G13370.1 AAGTAACCTATGCAAGGCGCAGACCCATCATATTTTTGTAGTACAACTTTTTAGAAACGCTTTAAGAGAAATCTAAC 18 6745769 0.798229395 7 15 139 0.85 1.230448921 0.05 0.111111111 0.2 18 3 0 17 2R:6745733-6745809 7 phtf FBtr0086125 6745737 6746141 AGTACAA 7mer-m8 dme-miR-305-5p 2R + 6745758 6745787 3'utr phtf FlyBase G10205.1 CATCATATTTTTGTAGTACAACTTTTTAGA 7 6745769 0.678057599 2 5 66 0.8 0.903089987 0 0.285714286 0.5 7 2 0 8 2R:6745758-6745787 7 7 1232 FBgn0028579 314.3333333 11.34333333 17.39 0.022269353 0.617102557 0.40253019 3 3 3 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 6748728 6748735 + 2R_6748728_6748735_+ 0.602805305 0.60975226 0.606278782 0.004912271 CG3267 FBtr0086126 6748653 6748954 2R + 6748663 6748801 3'utr CG3267 FlyBase G13376.1 TGTATGCTGGAGAAATTTAATCGGAGCGCATTTACAGGCATTTAATGCCTTTATTTCGAAACTGTTGCATTTATTAGCGTTAAGGCAATTGTTAACTGTGTAATGTACAACTGATTGTTTATTAGGAACAGGCGTGTGA 667 6748727 0.986861481 29 646 6148 0.967405476 2.393282651 0.159061278 0.134932534 0.247718383 667 23 2 742 2R:6748663-6748801 8 CG3267 FBtr0086126 6748653 6748954 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 6748671 6748795 3'utr CG3267 FlyBase G10209.1 GGAGAAATTTAATCGGAGCGCATTTACAGGCATTTAATGCCTTTATTTCGAAACTGTTGCATTTATTAGCGTTAAGGCAATTGTTAACTGTGTAATGTACAACTGATTGTTTATTAGGAACAGGC 483 6748727 0.795692984 22 465 4393 0.964238411 2.260071388 0.147019868 0.407867495 0.621192053 483 24 3 728 2R:6748671-6748795 8 538 1233 FBgn0042083 366.6133333 20.74 31.70666667 1.46748618 25.94021215 16.96804037 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 6762254 6762260 - 2R_6762254_6762260_- 0.800141514 0.76174245 0.780941982 0.027152264 Epac FBtr0329850|FBtr0329850|FBtr0329850|FBtr0112636|FBtr0112636|FBtr0112636|FBtr0329851|FBtr0329851|FBtr0329851|FBtr0329849|FBtr0329849|FBtr0329849 6761911|6761911|6761911|6761911|6761911|6761911|6761911|6761911|6761911|6759713|6759713|6759713 6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646 2R - 6762230 6762279 3'utr Epac FlyBase G20210.1 AAAACTAAACTTGGACGTGTGTGATACTAAACATTTATAGGAGGCAACAT 46 6762262 0.896325008 7 46 287 1 1.740362689 0.054545455 0.195652174 0.327272727 46 0 0 55 2R:6762230-6762279 7 Epac FBtr0329850|FBtr0329850|FBtr0329850|FBtr0112636|FBtr0112636|FBtr0112636|FBtr0329851|FBtr0329851|FBtr0329851|FBtr0329849|FBtr0329849|FBtr0329849 6761911|6761911|6761911|6761911|6761911|6761911|6761911|6761911|6761911|6759713|6759713|6759713 6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 6762237 6762280 3'utr Epac FlyBase G15337.1 AAAAACTAAACTTGGACGTGTGTGATACTAAACATTTATAGGAG 40 6762262 0.776554013 7 40 258 1 1.880813592 0.052631579 0.575 0.776315789 40 0 0 76 2R:6762237-6762280 7 42 1234 FBgn0085421 11.33333333 0.29 0.44 3.705882353 144.8275862 95.45454545 2 2 2 0.2 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 6762343 6762350 - 2R_6762343_6762350_- 0.604653696 0.604536114 0.604594905 8.32E-05 Epac FBtr0329850|FBtr0112636|FBtr0329851|FBtr0329849 6761911|6761911|6761911|6759713 6762646|6762646|6762646|6762646 2R - 6762307 6762422 3'utr Epac FlyBase G20211.1 AGGAACTATCTCAATCTTCTAATGAACTGAAACCCAAACGCATTTTAATGCAAACGAGAAACTTTTTGCTTTAGTACAAAACGATGGAAAAGATGGAAAACAATTTGAAATTCGGC 43 6762352 0.985434524 12 41 334 0.958333333 1.662757832 0.458333333 0.093023256 0.1875 43 2 0 46 2R:6762307-6762422 8 Epac FBtr0329850|FBtr0112636|FBtr0329851|FBtr0329849 6761911|6761911|6761911|6759713 6762646|6762646|6762646|6762646 AGTACAAA 8mer-A1 dme-miR-305-5p 2R - 6762325 6762422 3'utr Epac FlyBase G15338.1 AGGAACTATCTCAATCTTCTAATGAACTGAAACCCAAACGCATTTTAATGCAAACGAGAAACTTTTTGCTTTAGTACAAAACGATGGAAAAGATGGAA 39 6762352 0.739158666 9 33 270 0.898305085 1.72427587 0.372881356 0.358974359 0.576271186 39 6 0 53 2R:6762325-6762422 8 32.5 1235 FBgn0085421 11.33333333 0.29 0.44 2.867647059 112.0689655 73.86363636 2 2 2 0.2 dme-miR-1007-3p 8mer-A1 TGAGCTTA 2R 6762546 6762553 - 2R_6762546_6762553_- 0.624005489 0.624878558 0.624442023 0.000617375 Epac FBtr0329850|FBtr0112636|FBtr0329851|FBtr0329849 6761911|6761911|6761911|6759713 6762646|6762646|6762646|6762646 2R - 6762523 6762576 3'utr Epac FlyBase G20213.1 AACCGCAATTAGCTGCACAGTTATGAGCTTAGCCGGGTTGTTGTTGCTTTCCGA 31 6762553 0.82651848 4 31 272 1 1.556302501 0.083333333 0.161290323 0.277777778 31 0 0 36 2R:6762523-6762576 8 Epac FBtr0329850|FBtr0112636|FBtr0329851|FBtr0329849 6761911|6761911|6761911|6759713 6762646|6762646|6762646|6762646 TGAGCTTA 8mer-A1 dme-miR-1007-3p 2R - 6762528 6762575 3'utr Epac FlyBase G15340.1 ACCGCAATTAGCTGCACAGTTATGAGCTTAGCCGGGTTGTTGTTGCTT 27 6762553 0.818818673 4 26 227 0.973684211 1.267171728 0.236842105 0.296296296 0.5 27 0 1 37 2R:6762528-6762575 8 28.5 1236 FBgn0085421 11.33333333 0.29 0.44 2.514705882 98.27586207 64.77272727 0 0 0 0.2 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 6814423 6814430 + 2R_6814423_6814430_+ 0.605633034 0.605539696 0.605586365 6.60E-05 koi FBtr0335515|FBtr0335517|FBtr0335516 6814313|6814313|6814313 6814812|6814812|6814812 2R + 6814349 6814473 3'utr koi FlyBase G13408.1 ATTTAGTGATCTGGTTGGGTGCAACGCCCCTTGCACTTAGACAAATATGAGAAACTTTCTTTATGAACAATATGAGTACAAAATAAAGCATTTGATCCGTTTTTTGTCCGTCTGCTTGACCCGCA 49 6814421 0.781396755 20 45 341 0.945454545 1.716003344 0.109090909 0.12244898 0.218181818 49 3 0 52 2R:6814349-6814473 8 koi FBtr0335516|FBtr0335515|FBtr0335517 6814313|6814313|6814313 6814812|6814812|6814812 AGTACAAA 8mer-A1 dme-miR-305-5p 2R + 6814396 6814437 3'utr koi FlyBase G10230.1 TGAGAAACTTTCTTTATGAACAATATGAGTACAAAATAAAGC 14 6814421 0.698419374 5 12 70 0.769230769 1.301029996 0.192307692 0.571428571 0.769230769 14 6 0 20 2R:6814396-6814437 8 15 1237 FBgn0265003 944.7366667 44.58333333 68.22333333 0.01587744 0.336448598 0.219866126 2 2 2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 6818189 6818194 + 2R_6818189_6818194_+ 0.608266316 0.590554604 0.59941046 0.012524063 koi FBtr0335514|FBtr0335514|FBtr0335514|FBtr0335512|FBtr0335512|FBtr0335512|FBtr0335513|FBtr0335513|FBtr0335513 6817004|6817004|6817004|6817004|6817004|6817004|6817004|6817004|6817004 6818199|6818199|6818199|6818199|6818199|6818199|6818199|6818199|6818199 2R + 6818161 6818199 3'utr koi FlyBase G13421.1 TTCACCATTTTTAACAATAAACACATTGCTGTGAAAAAA 79 6818186 0.764177338 3 79 334 1 1.973127854 0.010638298 0.164556962 0.29787234 79 0 0 94 2R:6818161-6818199 6 koi FBtr0335513|FBtr0335513|FBtr0335513|FBtr0335514|FBtr0335514|FBtr0335514|FBtr0335512|FBtr0335512|FBtr0335512 6817004|6817004|6817004|6817004|6817004|6817004|6817004|6817004|6817004 6818199|6818199|6818199|6818199|6818199|6818199|6818199|6818199|6818199 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 6818154 6818199 3'utr koi FlyBase G10243.1 AAGGTTTTTCACCATTTTTAACAATAAACACATTGCTGTGAAAAAA 33 6818186 0.948439318 4 33 149 1 1.716003344 0.076923077 0.424242424 0.634615385 33 0 0 52 2R:6818154-6818199 6 55.5 1238 FBgn0265003 944.7366667 44.58333333 68.22333333 0.058746529 1.244859813 0.813504666 3 3 3 0.2 dme-bantam-3p 6mer3-8 TGATCT 2R 6876228 6876233 - 2R_6876228_6876233_- 0.643079425 0.607713195 0.62539631 0.02500768 Spn42Da FBtr0086201|FBtr0086198|FBtr0086205|FBtr0300336|FBtr0086200|FBtr0086202|FBtr0086199 6876151|6876151|6876151|6876151|6876151|6876151|6876151 6876389|6876389|6876596|6876596|6876596|6876596|6876596 2R - 6876162 6876261 3'utr Spn42Da FlyBase G20243.1 CACAAAATTATAGTCTGTGCGCAATTGATGATCTTATATATACACTTAATATTTTTATACTAACCAAGCATGTAGCCGTAGCCTCAATAAAGTCTAAAAG 262 6876233 0.985890142 17 254 2158 0.965517241 2.011429462 0.520376176 0.187022901 0.332288401 262 9 2 308 2R:6876162-6876261 6 Spn42Da FBtr0300336|FBtr0086205|FBtr0086198|FBtr0086201|FBtr0086199|FBtr0086202|FBtr0086200 6876151|6876151|6876151|6876151|6876151|6876151|6876151 6876596|6876596|6876389|6876389|6876596|6876596|6876596 TGATCT 6mer3-8 dme-bantam-3p 2R - 6876210 6876261 3'utr Spn42Da FlyBase G15364.2 CACAAAATTATAGTCTGTGCGCAATTGATGATCTTATATATACACTTAATAT 211 6876233 0.708994829 14 201 1631 0.962848297 2.191730393 0.551083591 0.379146919 0.594427245 211 11 1 311 2R:6876210-6876261 6 201 1239 FBgn0265137 341.8233333 23.49666667 36.20333333 0.588023053 8.55440488 5.551974956 0 0 0 0.2 dme-miR-980-3p 6mer3-8 GGCAGC 2R 6876405 6876410 - 2R_6876405_6876410_- 0.962220638 0.962321246 0.962270942 7.11E-05 Spn42Da FBtr0086205|FBtr0300336|FBtr0086200|FBtr0086202|FBtr0086199 6876151|6876151|6876151|6876151|6876151 6876596|6876596|6876596|6876596|6876596 2R - 6876339 6876435 3'utr Spn42Da FlyBase G20244.2 CAAGGACTCAACCGCTCTCTTCGCTGGCAGCATAAAGAAACTCTAAATAGGCAAACATACTAACCAATCCACAATGTTACTCGAGGGTCTCGTATTC 70 6876411 0.863574409 12 65 403 0.928571429 1.892094603 0.238095238 0.157142857 0.297619048 70 6 0 78 2R:6876339-6876435 6 Spn42Da FBtr0300336|FBtr0086205|FBtr0086199|FBtr0086202|FBtr0086200 6876151|6876151|6876151|6876151|6876151 6876596|6876596|6876596|6876596|6876596 GGCAGC 6mer3-8 dme-miR-980-3p 2R - 6876332 6876434 3'utr Spn42Da FlyBase G15365.1 AAGGACTCAACCGCTCTCTTCGCTGGCAGCATAAAGAAACTCTAAATAGGCAAACATACTAACCAATCCACAATGTTACTCGAGGGTCTCGTATTCATTTAAC 54 6876411 0.91980082 10 47 306 0.891566265 1.392110465 0.301204819 0.333333333 0.56626506 54 7 2 74 2R:6876332-6876434 6 40 1240 FBgn0265137 341.8233333 23.49666667 36.20333333 0.117019513 1.70236913 1.104870638 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 6972183 6972189 - 2R_6972183_6972189_- 0.781160401 0.684637894 0.732899147 0.068251714 Cyp6u1 FBtr0345011|FBtr0345011|FBtr0345011|FBtr0345802|FBtr0345802|FBtr0345802|FBtr0086185|FBtr0086185|FBtr0086185 6972110|6972110|6972110|6971994|6971994|6971994|6972110|6972110|6972110 6972304|6972304|6972304|6972304|6972304|6972304|6972304|6972304|6972304 2R - 6972168 6972228 3'utr Cyp6u1 FlyBase G20259.1 ATGCACCTTTTTCGTTGATTTTCCTAAGCTGTGGACTTGTGTGATAATGCTGACGATGACT 42 6972191 0.634960819 9 38 366 0.901960784 1.361727836 0.235294118 0.19047619 0.333333333 42 4 1 46 2R:6972168-6972228 7 Cyp6u1 FBtr0086185|FBtr0086185|FBtr0086185|FBtr0345011|FBtr0345011|FBtr0345011|FBtr0345802|FBtr0345802|FBtr0345802 6972110|6972110|6972110|6972110|6972110|6972110|6971994|6971994|6971994 6972304|6972304|6972304|6972304|6972304|6972304|6972304|6972304|6972304 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 6972162 6972215 3'utr Cyp6u1 FlyBase G15377.1 GTTGATTTTCCTAAGCTGTGGACTTGTGTGATAATGCTGACGATGACTTTTATA 12 6972192 0.983267933 7 12 91 1 1.146128036 0.571428571 0.166666667 0.285714286 12 0 0 14 2R:6972162-6972215 7 21 1241 FBgn0033121 218 13.62333333 20.59666667 0.096330275 1.541472963 1.019582457 2 3 2.5 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 2R 6976126 6976131 - 2R_6976126_6976131_- 0.770797682 0.970883383 0.870840532 0.141481955 vimar FBtr0086183|FBtr0086182 6975283|6975283 6976552|6976552 2R - 6976108 6976155 3'utr vimar FlyBase G20267.1 CAAAGCAACGATTCAGATGTAGACTTGACTGTAGTTTGGTAAGAAGAA 40 6976136 0.810725046 6 38 321 0.951219512 1.591064607 0.219512195 0.025 0.048780488 40 2 0 39 2R:6976108-6976155 6 vimar FBtr0086182|FBtr0086183 6975283|6975283 6976552|6976552 TTGACT 6mer3-8 dme-miR-1012-3p 2R - 6976096 6976151 3'utr vimar FlyBase G15384.1 GCAACGATTCAGATGTAGACTTGACTGTAGTTTGGTAAGAAGAAAGTGCAGATTCA 18 6976135 0.989496595 5 15 142 0.8 1.079181246 0.2 0.444444444 0.666666667 18 5 1 24 2R:6976096-6976151 6 29 1242 FBgn0022960 1005.046667 35.31333333 54.35 0.028854382 0.821219558 0.533578657 5 4 4.5 0.2 dme-miR-282-5p 6mer3-8 AGAGGC 2R 7017790 7017795 + 2R_7017790_7017795_+ 0.755965929 0.7711323 0.763549115 0.010724264 Tsp42Ee FBtr0336871|FBtr0086180 7017760|7017760 7018362|7018362 2R + 7017741 7017872 stop_codon Tsp42Ee FlyBase G13454.1 AAGCGCCGGAACGCCTACTAAGCAATAGGTGTATCCATCAACTACATCTAGAGGCACACCCACATCCAGTAGCACACACACCTCACATTCTCATTAACTTTTACAGTCGTTGAACGCACATACACAACGGGA 56 7017789 0.968335448 12 50 220 0.909090909 1.146128036 0.051948052 0.25 0.454545455 56 3 4 70 2R:7017741-7017872 6 Tsp42Ee FBtr0086180|FBtr0336871 7017760|7017760 7018362|7018362 AGAGGC 6mer3-8 dme-miR-282-5p 2R + 7017772 7017950 3'utr Tsp42Ee FlyBase G10263.1 TATCCATCAACTACATCTAGAGGCACACCCACATCCAGTAGCACACACACCTCACATTCTCATTAACTTTTACAGTCGTTGAACGCACATACACAACGGGATACACAATAACACCTTGAAATAAGCCATTTAAGTGGATATTTGTCACGGAAAAACAAGAAGAAGCTTAGTTTAAGGCG 58 7017789 0.952836223 14 53 235 0.917525773 1.472268752 0.12371134 0.465517241 0.680412371 58 6 2 89 2R:7017772-7017950 6 32 1243 FBgn0029506 12272.56 1084.96 1657.746667 0.002607443 0.029494175 0.019303311 1 1 1 0.2 dme-miR-999-3p 6mer3-8 AGTTAA 2R 7272832 7272837 - 2R_7272832_7272837_- 0.9999982 0.646491196 0.823244698 0.249967197 Br140 FBtr0345370|FBtr0089021 7272273|7272531 7273271|7273271 2R - 7272789 7272844 3'utr Br140 FlyBase G20296.1 ATGTTTAAGTTAAATAGTTTTAAGCTCTCCTACTGTTAAGCCCGGAATCAACATTA 18 7272833 0.998449804 6 7 158 0.375 0.653212514 0.041666667 0.166666667 0.375 18 14 1 9 2R:7272789-7272844 6 Br140 FBtr0089021|FBtr0345370 7272531|7272273 7273271|7273271 AGTTAA 6mer3-8 dme-miR-999-3p 2R - 7272784 7272835 3'utr Br140 FlyBase G15401.1 TTAAATAGTTTTAAGCTCTCCTACTGTTAAGCCCGGAATCAACATTATAAGC 20 7272826 0.995949793 9 10 174 0.448275862 0.636822098 0.034482759 0.25 0.482758621 20 14 2 13 2R:7272784-7272835 4 13.5 1244 FBgn0033155 560.6533333 12.28666667 18.82333333 0.024079051 1.098752035 0.717194971 -4 -11 -7.5 0.2 dme-miR-12-5p 6mer2-7 ATACTC 2R 7273157 7273162 - 2R_7273157_7273162_- 0.978827075 0.973709245 0.97626816 0.003618902 Br140 FBtr0345370|FBtr0089021 7272273|7272531 7273271|7273271 2R - 7273074 7273308 stop_codon Br140 FlyBase G20299.1 CGACTTGGAGGGCCAAGGACCCGATCCGATCATGTGAAAGCTGATGGCCCGATTGCAACTGTAGGCGCCGCTCGAAAGAATTCAGCCATTTAGTTAGCTCCCCCACAAGGGATCGCCGTATTTTTATATCTCGTTGTTGTTACTTGATACTCGAAGATGACGCAGTTGAAGAAGGCCCTCCATTAGAGTATTTCGTTGGCGAATTTCCAATTTGCACTGCAAGTGTCTTTAATTT 88 7273164 0.98305302 22 84 635 0.963302752 2.021189299 0.412844037 0.215909091 0.366972477 88 4 0 105 2R:7273074-7273308 6 Br140 FBtr0089021|FBtr0345370 7272531|7272273 7273271|7273271 ATACTC 6mer2-7 dme-miR-12-5p 2R - 7273107 7273183 3'utr Br140 FlyBase G15403.1 ATATCTCGTTGTTGTTACTTGATACTCGAAGATGACGCAGTTGAAGAAGGCCCTCCATTAGAGTATTTCGTTGGCGA 58 7273164 0.768418041 8 52 450 0.926829268 1.278753601 0.353658537 0.293103448 0.5 58 3 3 76 2R:7273107-7273183 6 45 1245 FBgn0033155 560.6533333 12.28666667 18.82333333 0.080263502 3.662506782 2.390649903 2 2 2 0.2 dme-bantam-3p 6mer3-8 TGATCT 2R 7319607 7319612 - 2R_7319607_7319612_- 0.994830627 0.996389013 0.99560982 0.001101955 Dscam1 FBtr0111083|FBtr0111055|FBtr0111050|FBtr0111066|FBtr0111070|FBtr0111077|FBtr0111100|FBtr0111076|FBtr0111060|FBtr0306779|FBtr0089019|FBtr0111078|FBtr0089020|FBtr0111058|FBtr0111052|FBtr0111087|FBtr0306786|FBtr0306780|FBtr0111085|FBtr0111065|FBtr0111099|FBtr0306772|FBtr0111097|FBtr0306774|FBtr0306783|FBtr0111057|FBtr0306771|FBtr0111061|FBtr0089018|FBtr0111102|FBtr0111068|FBtr0306784|FBtr0306777|FBtr0306778|FBtr0111101|FBtr0306787|FBtr0111082|FBtr0111074|FBtr0111098|FBtr0111096|FBtr0306782|FBtr0111073|FBtr0111088|FBtr0334801|FBtr0111064|FBtr0111062|FBtr0111049|FBtr0111072|FBtr0111084|FBtr0111081|FBtr0111089|FBtr0111071|FBtr0306770|FBtr0111092|FBtr0111051|FBtr0306773|FBtr0111069|FBtr0111063|FBtr0306781|FBtr0306776|FBtr0111053|FBtr0111080|FBtr0111059|FBtr0111056|FBtr0111075|FBtr0089016|FBtr0306769|FBtr0306775|FBtr0111067|FBtr0111079|FBtr0306767|FBtr0111094|FBtr0306768|FBtr0306785|FBtr0111054 7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7317922|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552 7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320675|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682 2R - 7319560 7319710 3'utr Dscam1 FlyBase G20310.1 ACGATTTATTAAACCAATTCTGATATAGACCGTTCTGAACATGAGTTATACGCATTTGAAGCTTTAAGAGAACCTGAAATTGTTTATTTCACTTCATTTGATCTATCCTAAGTTATTAGTTCATAAGTTGCTAAATATATGATTTTGATTT 150 7319613 0.991665558 26 144 1585 0.966666667 1.763427994 0.055555556 0.146666667 0.288888889 150 4 2 174 2R:7319560-7319710 6 Dscam1 FBtr0306787|FBtr0111101|FBtr0111074|FBtr0111082|FBtr0111102|FBtr0111063|FBtr0306778|FBtr0111053|FBtr0306777|FBtr0111068|FBtr0306771|FBtr0111057|FBtr0089018|FBtr0111061|FBtr0089016|FBtr0111099|FBtr0111079|FBtr0306783|FBtr0306774|FBtr0111097|FBtr0306780|FBtr0306786|FBtr0111065|FBtr0111085|FBtr0089020|FBtr0306782|FBtr0111078|FBtr0089019|FBtr0111052|FBtr0111058|FBtr0111076|FBtr0111100|FBtr0306779|FBtr0111060|FBtr0111050|FBtr0111055|FBtr0111084|FBtr0111083|FBtr0111077|FBtr0111066|FBtr0111094|FBtr0306767|FBtr0111054|FBtr0306785|FBtr0306768|FBtr0306775|FBtr0306769|FBtr0306772|FBtr0111067|FBtr0111080|FBtr0111075|FBtr0111056|FBtr0111059|FBtr0306781|FBtr0111069|FBtr0306776|FBtr0306784|FBtr0111092|FBtr0306770|FBtr0111071|FBtr0306773|FBtr0111051|FBtr0111081|FBtr0111072|FBtr0111089|FBtr0111070|FBtr0111064|FBtr0334801|FBtr0111088|FBtr0111049|FBtr0111062|FBtr0111096|FBtr0111098|FBtr0111087|FBtr0111073 7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7317922|7319552|7319552|7319552|7319552|7319552|7319552|7319552 7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320675|7320682|7320682|7320682|7320682|7320682|7320682|7320682 TGATCT 6mer3-8 dme-bantam-3p 2R - 7319554 7319697 3'utr Dscam1 FlyBase G15417.1 CCAATTCTGATATAGACCGTTCTGAACATGAGTTATACGCATTTGAAGCTTTAAGAGAACCTGAAATTGTTTATTTCACTTCATTTGATCTATCCTAAGTTATTAGTTCATAAGTTGCTAAATATATGATTTTGATTTTATTTT 86 7319613 0.990918916 18 83 870 0.946564885 2.093421685 0.076335878 0.348837209 0.572519084 86 7 0 124 2R:7319554-7319697 6 91.5 1246 FBgn0033159 794.49 12.18 18.55333333 0.115168221 7.512315271 4.931728351 1 1 1 0.2 dme-miR-79-3p 6mer3-8 TAGCTT 2R 7320640 7320645 - 2R_7320640_7320645_- 0.996638118 0.94996137 0.973299744 0.033005411 Dscam1 FBtr0111083|FBtr0111055|FBtr0111050|FBtr0111066|FBtr0111070|FBtr0111077|FBtr0111100|FBtr0111076|FBtr0111060|FBtr0306779|FBtr0089019|FBtr0111078|FBtr0089020|FBtr0111058|FBtr0111052|FBtr0111087|FBtr0306786|FBtr0306780|FBtr0111085|FBtr0111065|FBtr0111099|FBtr0306772|FBtr0111097|FBtr0306774|FBtr0306783|FBtr0111057|FBtr0306771|FBtr0111061|FBtr0089018|FBtr0111102|FBtr0111068|FBtr0306784|FBtr0306777|FBtr0306778|FBtr0111101|FBtr0306787|FBtr0111082|FBtr0111074|FBtr0111098|FBtr0111096|FBtr0306782|FBtr0111073|FBtr0111088|FBtr0334801|FBtr0111064|FBtr0111062|FBtr0111049|FBtr0111072|FBtr0111084|FBtr0111081|FBtr0111089|FBtr0111071|FBtr0306770|FBtr0111092|FBtr0111051|FBtr0306773|FBtr0111069|FBtr0111063|FBtr0306781|FBtr0306776|FBtr0111053|FBtr0111080|FBtr0111059|FBtr0111056|FBtr0111075|FBtr0089016|FBtr0306769|FBtr0306775|FBtr0111067|FBtr0111079|FBtr0306767|FBtr0111094|FBtr0306768|FBtr0306785|FBtr0111054 7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7317922|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552 7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320675|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682 2R - 7320601 7320707 stop_codon Dscam1 FlyBase G20314.1 AGCCTACGATACTATGGCAGTGTAATTTGTAAGCGCCCTCTGCGGCGGTGGGCGTGGCATTTTAGCTTAGTGTTTTAGGTGCATGAAGTGCGTGGGAGTTGAATGAC 32 7320646 0.815431043 14 30 234 0.914285714 1.505149978 0.228571429 0.09375 0.171428571 32 3 0 32 2R:7320601-7320707 6 Dscam1 FBtr0306787|FBtr0111101|FBtr0111074|FBtr0111082|FBtr0111102|FBtr0111063|FBtr0306778|FBtr0111053|FBtr0306777|FBtr0111068|FBtr0306771|FBtr0111057|FBtr0089018|FBtr0111061|FBtr0089016|FBtr0111099|FBtr0111079|FBtr0306783|FBtr0306774|FBtr0111097|FBtr0306780|FBtr0306786|FBtr0111065|FBtr0111085|FBtr0089020|FBtr0306782|FBtr0111078|FBtr0089019|FBtr0111052|FBtr0111058|FBtr0111076|FBtr0111100|FBtr0306779|FBtr0111060|FBtr0111050|FBtr0111055|FBtr0111084|FBtr0111083|FBtr0111077|FBtr0111066|FBtr0111094|FBtr0306767|FBtr0111054|FBtr0306785|FBtr0306768|FBtr0306775|FBtr0306769|FBtr0306772|FBtr0111067|FBtr0111080|FBtr0111075|FBtr0111056|FBtr0111059|FBtr0306781|FBtr0111069|FBtr0306776|FBtr0306784|FBtr0111092|FBtr0306770|FBtr0111071|FBtr0306773|FBtr0111051|FBtr0111081|FBtr0111072|FBtr0111089|FBtr0111070|FBtr0111064|FBtr0334801|FBtr0111088|FBtr0111049|FBtr0111062|FBtr0111096|FBtr0111098|FBtr0111087|FBtr0111073 7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7317922|7319552|7319552|7319552|7319552|7319552|7319552|7319552 7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320675|7320682|7320682|7320682|7320682|7320682|7320682|7320682 TAGCTT 6mer3-8 dme-miR-79-3p 2R - 7320592 7320708 stop_codon Dscam1 FlyBase G15423.1 CAGCCTACGATACTATGGCAGTGTAATTTGTAAGCGCCCTCTGCGGCGGTGGGCGTGGCATTTTAGCTTAGTGTTTTAGGTGCATGAAGTGCGTGGGAGTTGAATGACACTTAGAGA 24 7320646 0.974802603 12 22 136 1 1.602059991 0.325 0.5 0.7 24 0 0 40 2R:7320592-7320708 6 11 1247 FBgn0033159 794.49 12.18 18.55333333 0.01384536 0.903119869 0.592885375 1 1 1 0.2 dme-miR-7-5p 7mer-m8 GTCTTCC 2R 7382570 7382576 - 2R_7382570_7382576_- 0.698400065 0.703102462 0.700751264 0.003325099 cos FBtr0089015|FBtr0336916 7382174|7382521 7383196|7383196 2R - 7382528 7382609 3'utr cos FlyBase G20350.1 TGTTAGTTTTAGCTTAGTTGTAAACACTATTGTGTCTTCCCTCGAATTTTAATTGACCTTCGATACCAATTACAACATACGT 35 7382578 0.847022236 10 35 328 1 1.633468456 0.162790698 0.171428571 0.325581395 35 0 0 43 2R:7382528-7382609 7 cos FBtr0089015|FBtr0336916 7382174|7382521 7383196|7383196 GTCTTCC 7mer-m8 dme-miR-7-5p 2R - 7382547 7382600 3'utr cos FlyBase G15442.1 TAGCTTAGTTGTAAACACTATTGTGTCTTCCCTCGAATTTTAATTGACCTTCGA 22 7382577 0.699560207 5 18 214 0.827586207 1.380211242 0.103448276 0.318181818 0.482758621 22 5 0 24 2R:7382547-7382600 7 25 1248 FBgn0000352 545 14.08 21.54666667 0.04587156 1.775568182 1.160272277 2 1 1.5 0.2 dme-miR-1002-5p 8mer-A1 CTACTTAA 2R 7382727 7382734 - 2R_7382727_7382734_- 0.583816229 0.617036973 0.600426601 0.023490653 cos FBtr0089015|FBtr0336916 7382174|7382521 7383196|7383196 2R - 7382689 7382781 3'utr cos FlyBase G20351.1 ATGAAAGTAACTATCCTCATGAGATTCAACCGTAAAGACTTGACCTGCTACTTAAGATACTCGCAAGACAAACCGTACACAAAACTCGCTCAA 32 7382762 0.971748242 13 31 181 0.972972973 1.255272505 0.081081081 0.09375 0.216216216 32 0 1 36 2R:7382689-7382781 8 cos FBtr0089015|FBtr0336916 7382174|7382521 7383196|7383196 CTACTTAA 8mer-A1 dme-miR-1002-5p 2R - 7382712 7382778 3'utr cos FlyBase G15444.1 AAAGTAACTATCCTCATGAGATTCAACCGTAAAGACTTGACCTGCTACTTAAGATACTCGCAAGACA 23 7382737 0.749251079 11 21 129 0.891891892 1.51851394 0.216216216 0.52173913 0.702702703 23 4 0 33 2R:7382712-7382778 8 15 1249 FBgn0000352 545 14.08 21.54666667 0.027522936 1.065340909 0.696163366 28 3 15.5 0.2 dme-miR-1012-3p 8mer-A1 TTGACTAA 2R 7398357 7398364 - 2R_7398357_7398364_- 0.620223415 0.607438067 0.613830741 0.009040572 Eaf FBtr0089009|FBtr0089006|FBtr0089008|FBtr0089007 7398224|7398224|7398224|7396848 7398395|7398395|7398395|7398395 2R - 7398347 7398493 stop_codon Eaf FlyBase G20380.1 AGTCCGGCATTTATGCGTCCAATGGTGGCTTTCCAAACGATTTCCTACAAAACGATCTGCAGTTGTCGTCAAATTCGTCCGACGATGACGACGACTAGCTGTTTAAAGTTTGATCTTATTTGCCTTCTTTTGACTAAACCAACGACA 102 7398375 0.855002773 23 100 868 0.98245614 1.748188027 0.166666667 0.107843137 0.201754386 102 1 1 112 2R:7398347-7398493 8 Eaf FBtr0089008|FBtr0089007|FBtr0089009|FBtr0089006 7398224|7396848|7398224|7398224 7398395|7398395|7398395|7398395 TTGACTAA 8mer-A1 dme-miR-1012-3p 2R - 7398306 7398421 stop_codon Eaf FlyBase G15459.1 ATTCGTCCGACGATGACGACGACTAGCTGTTTAAAGTTTGATCTTATTTGCCTTCTTTTGACTAAACCAACGACAACAAGAGCAACAACAATTATTGATATTTTGTCTATATGCGT 66 7398383 0.97971807 13 64 588 0.978723404 1.963787827 0.234042553 0.333333333 0.531914894 66 2 0 92 2R:7398306-7398421 8 19 1250 FBgn0033166 365.6833333 12.62666667 19.28666667 0.051957522 1.504751848 0.985136536 11 19 15 0.2 dme-miR-252-5p 7mer-m8 GTACTTA 2R 7444798 7444804 - 2R_7444798_7444804_- 0.579509606 0.579882181 0.579695893 0.000263468 kappaB-Ras FBtr0299801|FBtr0089002 7443822|7443822 7445025|7445025 2R - 7444781 7444879 5'utr kappaB-Ras FlyBase G20390.1 GTATTGATCCATTTAGAGTCTACTTGCCTTGTATTAACTGTTGTGCTTTAATGTGGGCCAGAGCCCAAGCCACTTGTACTTATGTCTCTTTGTGTGTGT 20 7444805 0.855629075 10 19 185 1 1.342422681 0.227272727 0.05 0.136363636 20 0 0 22 2R:7444781-7444879 7 kappaB-Ras FBtr0089002|FBtr0299801 7443822|7443822 7445025|7445025 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 7444792 7444845 5'utr kappaB-Ras FlyBase G15466.1 TAACTGTTGTGCTTTAATGTGGGCCAGAGCCCAAGCCACTTGTACTTATGTCTC 6 7444805 0.976794131 2 6 44 1 0.954242509 0.111111111 0.333333333 0.555555556 6 0 0 9 2R:7444792-7444845 7 6.5 1251 FBgn0040513 68.97 4.683333333 7.146666667 0.094243874 1.387900356 0.909514925 1 1 1 0.2 dme-miR-317-3p 6mer2-7 GTGTTC 2R 7449260 7449265 + 2R_7449260_7449265_+ 0.546382575 0.563057618 0.554720096 0.011791006 CG11125 FBtr0336911|FBtr0088974 7449165|7449165 7449995|7449415 2R + 7449195 7449277 3'utr CG11125 FlyBase G13525.1 ATTAAAGCATTCCATCGACTGACTGACCGAGCGAGCTACTGGAATCTTGGATTTGCAAAACACGCGTGTTCCTTTCAACCATG 49 7449261 0.797983302 11 42 210 0.881355932 1.238882089 0.406779661 0.183673469 0.322033898 49 5 2 52 2R:7449195-7449277 6 CG11125 FBtr0088974|FBtr0336911 7449165|7449165 7449415|7449995 GTGTTC 6mer2-7 dme-miR-317-3p 2R + 7449195 7449277 3'utr CG11125 FlyBase G10307.1 ATTAAAGCATTCCATCGACTGACTGACCGAGCGAGCTACTGGAATCTTGGATTTGCAAAACACGCGTGTTCCTTTCAACCATG 31 7449267 0.620719046 13 27 150 0.921568627 1.371067862 0.411764706 0.387096774 0.62745098 31 3 1 47 2R:7449195-7449277 6 9 1252 FBgn0033174 169.62 12.60333333 19.33 0.053059781 0.7140968 0.465597517 -1 -7 -4 0.2 dme-miR-2535b-3p 6mer3-8 CCGTGA 2R 7460541 7460546 - 2R_7460541_7460546_- 0.802784399 0.646299594 0.724541997 0.110651463 CG11141 FBtr0088999|FBtr0345799|FBtr0088998 7460429|7459683|7460429 7460659|7460659|7460659 2R - 7460514 7460603 3'utr CG11141 FlyBase G20411.2 ATTCTCTTTCTATGTTTCTATGTTTGCAAAAGTGTTGTGTTTATCAGATTGTGATCACCGTGATTTAGTTACTCTTTTTAGTGGAATTTA 664 7460539 0.949720983 25 649 5628 0.978391357 1.869764924 0.543817527 0.219879518 0.378151261 664 8 10 815 2R:7460514-7460603 6 CG11141 FBtr0088998|FBtr0345799|FBtr0088999 7460429|7459683|7460429 7460659|7460659|7460659 CCGTGA 6mer3-8 dme-miR-2535b-3p 2R - 7460516 7460717 stop_codon CG11141 FlyBase G15485.1 AACGCCAGCCACCAGTGACTCAAACACCTCCAGCGAGTGGGAGTTTTTGGACAACTAGTTCAGTATTAGAATTAAGTGCATACTCATTCGATTCCATTTGCATTTTTGCACTTTATTCTCTTTCTATGTTTCTATGTTTGCAAAAGTGTTGTGTTTATCAGATTGTGATCACCGTGATTTAGTTACTCTTTTTAGTGGAATT 712 7460539 0.98422822 37 693 5788 0.977653631 2.544068044 0.474860335 0.373595506 0.584729981 712 22 2 1050 2R:7460516-7460717 6 543 1253 FBgn0033177 665.0033333 30.53 46.47333333 0.81653726 17.78578447 11.68411993 -7 -7 -7 0.2 dme-miR-13b-2-5p 7mer-A1 TTGACGA 2R 7478960 7478966 - 2R_7478960_7478966_- 0.782843252 0.782293659 0.782568456 0.000388626 wech FBtr0300082 7478851 7483393 2R - 7478955 7478985 3'utr wech FlyBase G20448.1 AGCGTACATAGGTGTGGACTTGACGAGACAA 6 7478969 0.853788871 4 5 27 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2R:7478955-7478985 7 wech FBtr0300082 7478851 7483393 TTGACGA 7mer-A1 dme-miR-13b-2-5p 2R - 7478951 7479020 3'utr wech FlyBase G15509.1 TTATATACCCGAATATATATATATATATATATACAAGCGTACATAGGTGTGGACTTGACGAGACAAGAGT 9 7478971 0.971651016 5 9 57 1 1.079181246 0.083333333 0.222222222 0.416666667 9 0 0 12 2R:7478951-7479020 7 5.5 1254 FBgn0259745 2441.89 39.74 61.13333333 0.002252354 0.138399597 0.089967285 3 5 4 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 7479181 7479186 - 2R_7479181_7479186_- 0.514091932 0.711487196 0.612789564 0.139579555 wech FBtr0300082 7478851 7483393 2R - 7479107 7479215 3'utr wech FlyBase G20449.1 AAGGCGATAAATCGAAGTCTAGGAAATCTACCAAATCAAGCGACGGATTCAATAACGAGTTGCAGTTTAAAATTGTAATTGTGTAGTAGTGGAAAGCGAGGAGGAGGTC 28 7479187 0.939193217 6 26 106 0.911764706 1.491361694 0.088235294 0.178571429 0.323529412 28 3 0 31 2R:7479107-7479215 6 wech FBtr0300082 7478851 7483393 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 7479147 7479201 3'utr wech FlyBase G15510.1 AAGTCTAGGAAATCTACCAAATCAAGCGACGGATTCAATAACGAGTTGCAGTTTA 21 7479187 0.928356051 4 18 67 0.9375 1.477121255 0.03125 0.476190476 0.65625 21 2 0 30 2R:7479147-7479201 6 20.5 1255 FBgn0259745 2441.89 39.74 61.13333333 0.008395137 0.515853045 0.335332606 1 1 1 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 7479460 7479465 - 2R_7479460_7479465_- 0.5701274 0.983097618 0.776612509 0.292014029 wech FBtr0300082 7478851 7483393 2R - 7479433 7479503 3'utr wech FlyBase G20451.2 ATATATATCTAGGGCAAATGATTACCAAATTACAAATTACCAAAATCCCTCCTAGCCCGCTAATCTAAATC 37 7479451 0.868507629 9 32 182 0.880952381 0.86923172 0 0.081081081 0.19047619 37 1 4 37 2R:7479433-7479503 6 wech FBtr0300082 7478851 7483393 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 7479436 7479500 3'utr wech FlyBase G15511.2 TATATCTAGGGCAAATGATTACCAAATTACAAATTACCAAAATCCCTCCTAGCCCGCTAATCTAA 27 7479451 0.750409282 8 26 126 0.953488372 1.135662602 0 0.481481481 0.674418605 27 0 2 41 2R:7479436-7479500 6 21 1256 FBgn0259745 2441.89 39.74 61.13333333 0.008599896 0.528434826 0.34351145 -14 -14 -14 0.2 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 7479805 7479812 - 2R_7479805_7479812_- 0.598872052 0.600686374 0.599779213 0.001282904 wech FBtr0300082 7478851 7483393 2R - 7479677 7479854 3'utr wech FlyBase G20454.1 AAATACACGTACATAACATATGTAATAATTATGGAGCAATTGAGTACAAAACGAGTACAAATTTAAATTATAAGCCAGATCGGAGGACACACACGGACACACACCGCTTAAGTTAAACCATACACGGAGCAGTTGAAATATTGATAGGCCAGCTACTGGTTTCGCATAGCAAGTACAG 87 7479815 0.946764696 16 76 320 0.821428571 1.185636577 0.151785714 0.206896552 0.383928571 87 15 5 92 2R:7479677-7479854 8 wech FBtr0300082 7478851 7483393 AGTACAAA 8mer-A1 dme-miR-305-5p 2R - 7479668 7479830 3'utr wech FlyBase G15514.1 ATAATTATGGAGCAATTGAGTACAAAACGAGTACAAATTTAAATTATAAGCCAGATCGGAGGACACACACGGACACACACCGCTTAAGTTAAACCATACACGGAGCAGTTGAAATATTGATAGGCCAGCTACTGGTTTCGCATAGCAAGTACAGCATGTACTC 62 7479815 0.955929955 14 54 250 0.87755102 1.457377197 0.306122449 0.403225806 0.62244898 62 10 2 86 2R:7479668-7479830 8 56.5 1257 FBgn0259745 2441.89 39.74 61.13333333 0.023137815 1.421741319 0.924209378 3 3 3 0.2 dme-miR-970-3p 6mer3-8 TCTTAT 2R 7480160 7480165 - 2R_7480160_7480165_- 0.999785778 0.999981852 0.999883815 0.000138664 wech FBtr0300083|FBtr0300082 7480093|7478851 7483393|7483393 2R - 7480141 7480200 5'utr wech FlyBase G20456.1 AATCGATCGACGATGCTAAAGCAAACGGAATGAACTCTTATCAAAATACAATTTTGAGTA 63 7480163 0.775571462 6 62 314 0.985714286 1.838849091 0.057142857 0.111111111 0.2 63 1 0 69 2R:7480141-7480200 6 wech FBtr0300082|FBtr0300083 7478851|7480093 7483393|7483393 TCTTAT 6mer3-8 dme-miR-970-3p 2R - 7480139 7480196 5'utr wech FlyBase G15516.1 GATCGACGATGCTAAAGCAAACGGAATGAACTCTTATCAAAATACAATTTTGAGTAAT 43 7480164 0.951826613 5 41 195 0.963636364 1.72427587 0.2 0.23255814 0.4 43 2 0 53 2R:7480139-7480196 6 50 1258 FBgn0259745 2441.89 39.74 61.13333333 0.020475943 1.258178158 0.817884406 -2 -1 -1.5 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 2R 7480674 7480679 - 2R_7480674_7480679_- 0.986578535 0.989625266 0.9881019 0.002154413 wech FBtr0300083|FBtr0300082 7480093|7478851 7483393|7483393 2R - 7480671 7480727 5'utr wech FlyBase G20459.1 GTTAGACACAACCAATTACTACAAGTCATGAGGATACTGAACAATTTGCCAAAGGCT 7 7480682 0.946327776 5 7 32 1 1.041392685 0.363636364 0.285714286 0.545454545 7 0 0 11 2R:7480671-7480727 6 wech FBtr0300082|FBtr0300083 7478851|7480093 7483393|7483393 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 7480658 7480692 5'utr wech FlyBase G15518.1 ACTGAACAATTTGCCAAAGGCTAAGAATCAAAAGG 8 7480681 0.932466938 2 7 29 1 1.079181246 0.083333333 0.375 0.583333333 8 0 0 12 2R:7480658-7480692 6 5 1259 FBgn0259745 2441.89 39.74 61.13333333 0.002047594 0.125817816 0.081788441 3 2 2.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2R 7481165 7481170 - 2R_7481165_7481170_- 0.995234598 0.998474092 0.996854345 0.002290672 wech FBtr0300083|FBtr0300083|FBtr0300083|FBtr0300082|FBtr0300082|FBtr0300082 7480093|7480093|7480093|7478851|7478851|7478851 7483393|7483393|7483393|7483393|7483393|7483393 2R - 7481155 7481209 5'utr wech FlyBase G20462.1 TTTTATCCAATCGTACACCTTGAAGCGCCGTTCATTTCTTGTGATCCAGATCGAA 22 7481172 0.75689083 7 17 169 0.791666667 1.278753601 0.041666667 0.090909091 0.166666667 22 5 0 19 2R:7481155-7481209 6 wech FBtr0300082|FBtr0300082|FBtr0300082|FBtr0300083|FBtr0300083|FBtr0300083 7478851|7478851|7478851|7480093|7480093|7480093 7483393|7483393|7483393|7483393|7483393|7483393 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 7481149 7481205 5'utr wech FlyBase G15520.1 ATCCAATCGTACACCTTGAAGCGCCGTTCATTTCTTGTGATCCAGATCGAATCATTC 9 7481173 0.991900533 5 8 81 0.916666667 0.740362689 0.416666667 0.333333333 0.5 9 0 1 11 2R:7481149-7481205 6 7.5 1260 FBgn0259745 2441.89 39.74 61.13333333 0.003071391 0.188726724 0.122682661 2 3 2.5 0.2 dme-miR-317-3p 8mer-A1 TGTGTTCA 2R 7481615 7481622 - 2R_7481615_7481622_- 0.611719934 0.612573425 0.612146679 0.000603516 wech FBtr0300083|FBtr0300082 7480093|7478851 7483393|7483393 2R - 7481576 7481640 5'utr wech FlyBase G20464.2 CGTTCTATTCTTTGTCCTTGTGTTCAAACCCGACTTCAACGGATCGACGGAGATGATGATACATA 48 7481623 0.895786489 5 45 423 0.948275862 1.439332694 0.103448276 0.104166667 0.25862069 48 2 1 55 2R:7481576-7481640 8 wech FBtr0300082|FBtr0300083 7478851|7480093 7483393|7483393 TGTGTTCA 8mer-A1 dme-miR-317-3p 2R - 7481602 7481634 5'utr wech FlyBase G15522.2 ATTCTTTGTCCTTGTGTTCAAACCCGACTTCAA 26 7481623 0.713993729 3 25 210 0.971428571 1.531478917 0.028571429 0.192307692 0.4 26 1 0 34 2R:7481602-7481634 8 33.5 1261 FBgn0259745 2441.89 39.74 61.13333333 0.013718882 0.842979366 0.547982552 1 1 1 0.2 dme-miR-14-3p 8mer-A1 AAGACTGA 2R 7482500 7482507 - 2R_7482500_7482507_- 0.643564109 0.643565467 0.643564788 9.90E-07 wech FBtr0300084|FBtr0300083|FBtr0300080|FBtr0300082 7481874|7480093|7481874|7478851 7483393|7483393|7483393|7483393 2R - 7482445 7482554 3'utr wech FlyBase G20470.1 AAGAAAATATTGATGGAACCCGCTGACTTTTCGTTGAACTTTATACAAAGACTGATTAACTAAACCGCAATTTCGGAGCCAACTAAAGAACCATATATGGTGAGGCCAAA 241 7482499 0.829855746 19 219 1605 0.902356902 1.826074803 0.215488215 0.174273859 0.32996633 241 26 3 268 2R:7482445-7482554 8 wech FBtr0300082|FBtr0300084|FBtr0300083|FBtr0300080 7478851|7481874|7480093|7481874 7483393|7483393|7483393|7483393 AAGACTGA 8mer-A1 dme-miR-14-3p 2R - 7482280 7482554 3'utr wech FlyBase G15529.1 AAGAAAATATTGATGGAACCCGCTGACTTTTCGTTGAACTTTATACAAAGACTGATTAACTAAACCGCAATTTCGGAGCCAACTAAAGAACCATATATGGTGAGGCCAAAATAAGTGAAAGAGCAACACACTCAAATTGCAATGACATTGATAACGTAAAGTAACTTAACATAGCTTAACATACATACTTTCGCGCATATAGAGCGATACAGATATCATATAGATCCGATCATCCAGTCACGAATCATCATGGGCATAGCTGAAACCGAGTTTAA 229 7482499 0.978696172 34 217 1466 0.946629213 2.226599905 0.306179775 0.366812227 0.592696629 229 18 1 337 2R:7482280-7482554 8 165.5 1262 FBgn0259745 2441.89 39.74 61.13333333 0.067775371 4.164569703 2.707197383 -8 -8 -8 0.2 dme-miR-14-3p 7mer-A1 AGACTGA 2R 7482624 7482630 - 2R_7482624_7482630_- 0.820803804 0.821326684 0.821065244 0.000369746 wech FBtr0300084|FBtr0300083|FBtr0300080|FBtr0300082 7481874|7480093|7481874|7478851 7483393|7483393|7483393|7483393 2R - 7482588 7482672 3'utr wech FlyBase G20471.1 TTTGGGACATACATATGTATTTTAATGATTTCCTTATAATTGAGACTGAGCATTTGACAACACGAACTTTGCGTGTACGGAAGCA 374 7482632 0.814231969 12 366 2667 0.980477223 2.354108439 0.106290672 0.200534759 0.351409978 374 8 1 452 2R:7482588-7482672 7 wech FBtr0300082|FBtr0300084|FBtr0300083|FBtr0300080 7478851|7481874|7480093|7481874 7483393|7483393|7483393|7483393 AGACTGA 7mer-A1 dme-miR-14-3p 2R - 7482582 7482652 3'utr wech FlyBase G15530.1 TTTAATGATTTCCTTATAATTGAGACTGAGCATTTGACAACACGAACTTTGCGTGTACGGAAGCAAAGCGA 270 7482632 0.977139938 16 257 1794 0.956632653 2.273001272 0.091836735 0.344444444 0.548469388 270 16 1 375 2R:7482582-7482652 7 308 1263 FBgn0259745 2441.89 39.74 61.13333333 0.126131808 7.750377453 5.038167939 2 2 2 0.2 dme-miR-14-3p 7mer-A1 AGACTGA 2R 7482892 7482898 - 2R_7482892_7482898_- 0.677572649 0.691297697 0.684435173 0.009705111 wech FBtr0300084|FBtr0300083|FBtr0300080|FBtr0300082 7481874|7480093|7481874|7478851 7483393|7483393|7483393|7483393 2R - 7482830 7483090 3'utr wech FlyBase G20473.1 AACTAGAACTATAACTAAAACAAAAACAAAAAACAAAAACTAAAGCGAAAGGCAGGCGGTTGAGTAGGATTTAGGAGATATATATAAACGTAGGGTCCGTGAGCATTCAGTAGAGTTACCGAACCTAGTAAAAGATAATGCAAAGAGGGAACTCAACCATTTACTAGATGAAAATATTATTACCTGTTAGTTAGACTGAAAGGCAGTTTGCTAGCTGATAGAAGGAGGTACGAACCAGGTCAGGTGGCGATTGTGTTTTTT 261 7482900 0.977157368 33 247 1617 0.952830189 1.782472624 0.116352201 0.195402299 0.339622642 261 11 4 303 2R:7482830-7483090 7 wech FBtr0300082|FBtr0300084|FBtr0300083|FBtr0300080 7478851|7481874|7480093|7481874 7483393|7483393|7483393|7483393 AGACTGA 7mer-A1 dme-miR-14-3p 2R - 7482857 7482922 3'utr wech FlyBase G15533.1 TGAAAATATTATTACCTGTTAGTTAGACTGAAAGGCAGTTTGCTAGCTGATAGAAGGAGGTACGAA 129 7482900 0.70257958 13 124 775 0.959390863 1.975431809 0.091370558 0.372093023 0.588832487 129 7 1 189 2R:7482857-7482922 7 147.5 1264 FBgn0259745 2441.89 39.74 61.13333333 0.060404031 3.711625566 2.412758997 2 2 2 0.2 dme-miR-1007-3p 6mer2-7 GAGCTT 2R 7494721 7494726 - 2R_7494721_7494726_- 0.92661322 0.916658147 0.921635684 0.007039319 CG1620 FBtr0300830 7494010 7494823 2R - 7494700 7494752 3'utr CG1620 FlyBase G20512.1 TGGAAGAAGAGTGAGCGCCGGGATCAGAGCTTTGCTTTAAACGACACCATCGA 8 7494721 0.960619817 4 8 41 1 0.903089987 0.375 0 0 8 0 0 8 2R:7494700-7494752 6 CG1620 FBtr0300830 7494010 7494823 GAGCTT 6mer2-7 dme-miR-1007-3p 2R - 7494702 7494747 3'utr CG1620 FlyBase G15563.1 GAAGAGTGAGCGCCGGGATCAGAGCTTTGCTTTAAACGACACCATC 14 7494721 0.700856862 5 14 78 1 1.361727836 0.347826087 0.5 0.695652174 14 0 0 23 2R:7494702-7494747 6 10.5 1265 FBgn0033183 539.2866667 29.41333333 45.03 0.019470164 0.356980961 0.233177881 -5 -5 -5 0.2 dme-bantam-3p 6mer3-8 TGATCT 2R 7507528 7507533 + 2R_7507528_7507533_+ 0.962305487 0.964186844 0.963246165 0.00133028 didum FBtr0089744 7505871 7508237 2R + 7507510 7507563 3'utr didum FlyBase G13547.1 GGATGTTCAGACCATTTGTGATCTGTGTACTTCTCTGAGCACGGCGCAGGTCCT 16 7507525 0.987291717 5 16 144 1 1.204119983 0.25 0 0 16 0 0 16 2R:7507510-7507563 6 didum FBtr0089744 7505871 7508237 TGATCT 6mer3-8 dme-bantam-3p 2R + 7507513 7507562 3'utr didum FlyBase G10321.1 TGTTCAGACCATTTGTGATCTGTGTACTTCTCTGAGCACGGCGCAGGTCC 7 7507533 0.981461847 3 5 42 0.888888889 0.903089987 0.111111111 0.142857143 0.333333333 7 1 0 8 2R:7507513-7507562 6 10 1266 FBgn0261397 963.6266667 18.58333333 28.54333333 0.010377463 0.538116592 0.350344505 3 -5 -1 0.2 dme-miR-34-5p 6mer3-8 CACTGC 2R 7507914 7507919 + 2R_7507914_7507919_+ 0.999563559 0.999999993 0.999781776 0.000308581 didum FBtr0089743|FBtr0089745|FBtr0089744 7507857|7507857|7505871 7508237|7508625|7508237 2R + 7507856 7507927 stop_codon didum FlyBase G13548.1 TAAACGTCGCGTGCCTGCGTCTTGCCGGTCGAGAACTTTGCCATTTTGGATGACATTACACTGCTTAGTTTT 13 7507912 0.932591288 7 12 92 0.933333333 1.146128036 0.133333333 0.153846154 0.266666667 13 1 0 14 2R:7507856-7507927 6 didum FBtr0089744|FBtr0089745|FBtr0089743 7505871|7507857|7507857 7508237|7508625|7508237 CACTGC 6mer3-8 dme-miR-34-5p 2R + 7507865 7507927 3'utr didum FlyBase G10322.1 CGTGCCTGCGTCTTGCCGGTCGAGAACTTTGCCATTTTGGATGACATTACACTGCTTAGTTTT 6 7507912 0.990134796 5 5 45 1 1.113943352 0.153846154 0.666666667 0.846153846 6 0 0 13 2R:7507865-7507927 6 5 1267 FBgn0261397 963.6266667 18.58333333 28.54333333 0.005188731 0.269058296 0.175172253 2 2 2 0.2 dme-miR-79-3p 6mer3-8 TAGCTT 2R 7508048 7508053 + 2R_7508048_7508053_+ 0.933123485 0.968399877 0.950761681 0.024944182 didum FBtr0089743|FBtr0089745|FBtr0089744 7507857|7507857|7505871 7508237|7508625|7508237 2R + 7508010 7508066 3'utr didum FlyBase G13549.1 TAGAGCCGTTTTGCCGAAATGTTTGTGTAGTTCCTGTTTAGCTTAAATACCCGTTGT 16 7508047 0.991882828 8 14 156 0.944444444 1.230448921 0.111111111 0.0625 0.166666667 16 1 0 17 2R:7508010-7508066 6 didum FBtr0089744|FBtr0089745|FBtr0089743 7505871|7507857|7507857 7508237|7508625|7508237 TAGCTT 6mer3-8 dme-miR-79-3p 2R + 7508026 7508066 3'utr didum FlyBase G10323.1 AAATGTTTGTGTAGTTCCTGTTTAGCTTAAATACCCGTTGT 16 7508047 0.728151613 6 16 178 1 1.491361694 0.032258065 0.6875 0.838709677 16 0 0 31 2R:7508026-7508066 6 15 1268 FBgn0261397 963.6266667 18.58333333 28.54333333 0.015566194 0.807174888 0.525516758 1 1 1 0.2 dme-miR-283-5p 8mer-A1 TGATATTA 2R 7580650 7580657 + 2R_7580650_7580657_+ 0.591569761 0.591930909 0.591750335 0.000255336 Vps13 FBtr0088910|FBtr0310024 7580470|7580470 7580675|7580675 2R + 7580614 7580664 3'utr Vps13 FlyBase G13600.1 ATGTCGCACTTTTACGTATGTTAACAACCATGGTTTTGATATTAAAATTTT 10 7580648 0.98854002 5 10 95 1 1 0.1 0 0 10 0 0 10 2R:7580614-7580664 8 Vps13 FBtr0310024|FBtr0088910 7580470|7580470 7580675|7580675 TGATATTA 8mer-A1 dme-miR-283-5p 2R + 7580627 7580661 3'utr Vps13 FlyBase G10359.1 ACGTATGTTAACAACCATGGTTTTGATATTAAAAT 8 7580648 0.693611658 5 8 68 1 1.278753601 0 0.75 0.894736842 8 0 0 19 2R:7580627-7580661 8 8 1269 FBgn0033194 1638.743333 18.93 29.02666667 0.00488179 0.422609614 0.275608636 2 2 2 0.2 dme-miR-190-5p 8mer-m1 ACATATCT 2R 7651658 7651665 - 2R_7651658_7651665_- 0.569985984 0.547467123 0.558726553 0.015923267 CG17985 FBtr0088946 7651623 7652111 2R - 7651640 7651700 3'utr CG17985 FlyBase G20626.1 GGGATAGTTTCTCTTACGCCAAAAAAGTACGTAATACATATCTTAGAGCTAAATAAATAGT 11 7651658 0.981616119 5 10 68 0.916666667 1.041392685 0.25 0.090909091 0.166666667 11 1 0 11 2R:7651640-7651700 8 CG17985 FBtr0088946 7651623 7652111 ACATATCT 8mer-m1 dme-miR-190-5p 2R - 7651648 7651677 3'utr CG17985 FlyBase G15651.1 AAAGTACGTAATACATATCTTAGAGCTAAA 6 7651658 0.766135231 2 5 31 1 0.954242509 0.222222222 0.333333333 0.555555556 6 0 0 9 2R:7651648-7651677 8 6.5 1270 FBgn0033199 98.75333333 8.186666667 12.54333333 0.065820563 0.793973941 0.518203561 -7 -7 -7 0.2 dme-miR-1008-3p 7mer-A1 GCTGTGA 2R 7651813 7651819 - 2R_7651813_7651819_- 0.792172903 0.794584139 0.793378521 0.001704976 CG17985 FBtr0088946 7651623 7652111 2R - 7651798 7651846 3'utr CG17985 FlyBase G20627.1 AATTGCAGGATTCTAAGATCCGATTGTGCTGTGAATATAAATCGTAACC 15 7651822 0.975540418 3 15 116 1 1.230448921 0.117647059 0.133333333 0.235294118 15 0 0 17 2R:7651798-7651846 7 CG17985 FBtr0088946 7651623 7652111 GCTGTGA 7mer-A1 dme-miR-1008-3p 2R - 7651805 7651832 3'utr CG17985 FlyBase G15652.1 AAGATCCGATTGTGCTGTGAATATAAAT 13 7651822 0.719316456 2 11 79 1 1.361727836 0.130434783 0.615384615 0.782608696 13 0 0 23 2R:7651805-7651832 7 14 1271 FBgn0033199 98.75333333 8.186666667 12.54333333 0.141767367 1.71009772 1.116130747 3 3 3 0.2 dme-miR-970-3p 6mer2-7 CTTATG 2R 7667359 7667364 - 2R_7667359_7667364_- 0.991377847 0.999770836 0.995574341 0.005934747 CG12042 FBtr0088944 7667246 7667400 2R - 7667312 7667410 stop_codon CG12042 FlyBase G20642.1 AGCCAACTAAACTGGAAACTTATTAGCCAACAGGCGTACTAATCGACTTATGCGAAATATGAAATATGCTTTATGAAAGCTAGAGAAATATGTATTTAT 23 7667368 0.970218556 10 22 126 0.965517241 1.447158031 0.034482759 0.173913043 0.344827586 23 1 0 28 2R:7667312-7667410 6 CG12042 FBtr0088944 7667246 7667400 CTTATG 6mer2-7 dme-miR-970-3p 2R - 7667327 7667386 3'utr CG12042 FlyBase G15662.1 AGCCAACAGGCGTACTAATCGACTTATGCGAAATATGAAATATGCTTTATGAAAGCTAGA 8 7667368 0.957780341 5 8 44 1 1.079181246 0.083333333 0.375 0.583333333 8 0 0 12 2R:7667327-7667386 6 9 1272 FBgn0033206 185.4566667 12.72666667 19.49666667 0.048528857 0.707176532 0.46161737 4 4 4 0.2 dme-miR-252-5p 6mer3-8 GTACTT 2R 7718684 7718689 - 2R_7718684_7718689_- 0.99855999 0.999944763 0.999252377 0.000979201 CG18812 FBtr0330328|FBtr0306239|FBtr0330327|FBtr0088935|FBtr0088937|FBtr0088936 7718444|7718444|7718277|7718444|7718277|7716805 7719261|7719261|7719237|7719261|7719261|7719261 2R - 7718661 7718783 5'utr CG18812 FlyBase G20697.1 AACGTTAGCAATGCTGAAGAAAATAAAATTTGATTAGAGACCCTGCATGTACCGGATATACACAAGATTATTCTAAATATGAAATTGATAAATTGTACTTGATACTTGATTACTGAAGGGAGA 33 7718690 0.97787248 10 33 221 1 1.556302501 0.194444444 0.060606061 0.138888889 33 0 0 36 2R:7718661-7718783 6 CG18812 FBtr0306239|FBtr0330328|FBtr0088936|FBtr0088937|FBtr0088935|FBtr0330327 7718444|7718444|7716805|7718277|7718444|7718277 7719261|7719261|7719261|7719261|7719261|7719237 GTACTT 6mer3-8 dme-miR-252-5p 2R - 7718583 7718698 5'utr CG18812 FlyBase G15697.1 TGATAAATTGTACTTGATACTTGATTACTGAAGGGAGACAGACGTATATATGAATAAGTATACATATTGTTAGTTATCTTTGCAATTACAAATTGTATTATTAATGTATTAATACT 13 7718690 0.987002199 8 13 120 1 1.322219295 0.142857143 0.461538462 0.666666667 13 0 0 21 2R:7718583-7718698 6 12 1273 FBgn0042135 915.0533333 42.71666667 65.20333333 0.01311399 0.280920796 0.184039671 1 1 1 0.2 dme-miR-31a-5p 6mer3-8 TCTTGC 2R 7737111 7737116 - 2R_7737111_7737116_- 0.721638626 0.655132911 0.688385768 0.047026631 CG30497 FBtr0331966 7737017 7740276 2R - 7737072 7737167 3'utr CG30497 FlyBase G20712.1 CTATATCTATACCATATACAACAATTACCATACATATTACTTCTGTGCGCTTCTTGCGATCTAAGGAATTTCAATAAAAACAAACAAAAATACCTA 74 7737114 0.987474166 16 72 637 0.97752809 1.939519253 0.078651685 0.175675676 0.314606742 74 2 0 87 2R:7737072-7737167 6 CG30497 FBtr0331966 7737017 7740276 TCTTGC 6mer3-8 dme-miR-31a-5p 2R - 7737052 7737167 3'utr CG30497 FlyBase G15707.1 CTATATCTATACCATATACAACAATTACCATACATATTACTTCTGTGCGCTTCTTGCGATCTAAGGAATTTCAATAAAAACAAACAAAAATACCTAAAAAGTATAAAACCGACGAA 57 7737114 0.941554859 15 53 447 0.962962963 1.892094603 0.111111111 0.315789474 0.518518519 57 3 0 78 2R:7737052-7737167 6 54.5 1274 FBgn0050497 2910.163333 68.06 105.1533333 0.018727471 0.800764032 0.51829075 -2 -2 -2 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 2R 7737616 7737621 - 2R_7737616_7737621_- 0.963265113 0.949551278 0.956408196 0.009697121 CG30497 FBtr0331966 7737017 7740276 2R - 7737604 7737734 3'utr CG30497 FlyBase G20714.1 AGGACGATCATCTGAATTGATCTGATTTGTCGGAATTCTTTGGTTTTGCCAGCTGCAATGAAGAGGTTTATTTCATGTTTGGGTCCCATAGCTAATGCCTGGGCTGGGCGGATTGTGTTTTTACATACAAT 48 7737622 0.82279337 18 44 389 0.945454545 1.716003344 0.181818182 0.145833333 0.254545455 48 3 0 52 2R:7737604-7737734 6 CG30497 FBtr0331966 7737017 7740276 TGTGTT 6mer3-8 dme-miR-317-3p 2R - 7737604 7737654 3'utr CG30497 FlyBase G15711.1 GGGTCCCATAGCTAATGCCTGGGCTGGGCGGATTGTGTTTTTACATACAAT 22 7737622 0.749093456 6 22 183 1 1.447158031 0.321428571 0.227272727 0.392857143 22 0 0 28 2R:7737604-7737654 6 22.5 1275 FBgn0050497 2910.163333 68.06 105.1533333 0.007731525 0.330590655 0.213973245 1 1 1 0.2 dme-miR-184-5p 6mer3-8 TGATAA 2R 7738719 7738724 - 2R_7738719_7738724_- 0.978950548 0.930678841 0.954814694 0.034133246 CG30497 FBtr0331966|FBtr0088933|FBtr0088934 7737017|7737766|7737766 7740276|7740276|7740276 2R - 7738555 7738790 3'utr CG30497 FlyBase G20719.1 AGACGAAGGCGGCGTTTTGGGTTCCAGTCTAGAAATTCCAAGCAACAATCTAATTGCAGGCTGAAATGATAATTTAAAGCGATGATATGTAAATATTAGTCAAATTAATATGTGGACGAGGATTCGGAAGTGTAGAGGATTTATATATATATATATATATATGTGTCTGGTGTACCAGAAGTTGCTCAATGAAATTCAATCCACAAAGCAAAGTTAAACCGAAATAAATTTTAAAG 119 7738724 0.976392336 32 112 723 0.932885906 1.540954809 0.201342282 0.159663866 0.32885906 119 7 3 139 2R:7738555-7738790 6 CG30497 FBtr0088934|FBtr0088933|FBtr0331966 7737766|7737766|7737017 7740276|7740276|7740276 TGATAA 6mer3-8 dme-miR-184-5p 2R - 7738647 7738784 3'utr CG30497 FlyBase G15716.2 AGGCGGCGTTTTGGGTTCCAGTCTAGAAATTCCAAGCAACAATCTAATTGCAGGCTGAAATGATAATTTAAAGCGATGATATGTAAATATTAGTCAAATTAATATGTGGACGAGGATTCGGAAGTGTAGAGGATTTAT 64 7738724 0.848749464 15 62 371 0.978723404 1.963787827 0.063829787 0.34375 0.553191489 64 2 0 92 2R:7738647-7738784 6 51 1276 FBgn0050497 2910.163333 68.06 105.1533333 0.01752479 0.749338819 0.485006023 0 0 0 0.2 dme-miR-999-3p 6mer3-8 AGTTAA 2R 7787887 7787892 + 2R_7787887_7787892_+ 1 0.999947705 0.999973853 3.70E-05 CanB2 FBtr0088930|FBtr0309866 7787760|7787760 7788135|7789053 2R + 7787792 7787921 3'utr CanB2 FlyBase G13646.1 GATGTTATTTATTTATTTTATACACGTCGGCATCCTTCGATTGTCACTATCACCACTATTCATATGGTTATTATTTTTGATCGGCGATTCTCTATAGTTAAATATTGTTATGAGCCTTTGGCGAGCCAGT 30 7787908 0.994383499 17 19 255 0.666666667 1.079181246 0.194444444 0.133333333 0.277777778 30 11 1 24 2R:7787792-7787921 6 CanB2 FBtr0309866 7787760 7789053 AGTTAA 6mer3-8 dme-miR-999-3p 2R + 7787836 7787925 3'utr CanB2 FlyBase G10396.2 CACTATCACCACTATTCATATGGTTATTATTTTTGATCGGCGATTCTCTATAGTTAAATATTGTTATGAGCCTTTGGCGAGCCAGTTCAG 20 7787885 0.994248481 7 9 104 0.482758621 0.669006781 0.24137931 0.4 0.586206897 20 13 2 14 2R:7787836-7787925 6 5.5 1277 FBgn0015614 671.95 42.17666667 64.64333333 0.008185133 0.130403857 0.085082246 -21 2 -9.5 0.2 dme-miR-308-3p 8mer-m1 CTGTGATT 2R 7788280 7788287 + 2R_7788280_7788287_+ 0.385509779 0.385379473 0.385444626 9.21E-05 CanB2 FBtr0309866 7787760 7789053 2R + 7788233 7788308 3'utr CanB2 FlyBase G13648.1 CGAATGCACTTTCGCTCTATCATATTGATGTTATATTTCTAATTCTCCTGTGATTTTGCCAAAAACAAAACAAAAA 82 7788287 0.989321651 11 79 759 0.970588235 1.694605199 0.137254902 0.219512195 0.37254902 82 2 1 99 2R:7788233-7788308 8 CanB2 FBtr0309866 7787760 7789053 CTGTGATT 8mer-m1 dme-miR-308-3p 2R + 7788231 7788312 3'utr CanB2 FlyBase G10397.1 ATCGAATGCACTTTCGCTCTATCATATTGATGTTATATTTCTAATTCTCCTGTGATTTTGCCAAAAACAAAACAAAAAAAAA 72 7788287 0.989852015 11 70 690 0.97029703 1.991226076 0.148514851 0.333333333 0.524752475 72 3 0 98 2R:7788231-7788312 8 72.5 1278 FBgn0015614 671.95 42.17666667 64.64333333 0.107894933 1.71895993 1.1215387 -7 -7 -7 0.2 dme-miR-33-5p 7mer-m8 CAATGCA 2R 7800854 7800860 - 2R_7800854_7800860_- 0.645372977 0.674339852 0.659856414 0.020482691 Nop17l FBtr0088901|FBtr0088902|FBtr0088900 7800783|7800783|7800783 7801442|7801442|7801442 2R - 7800789 7800883 3'utr Nop17l FlyBase G20758.1 ATGTTTAGAAGCACTGGCTGAATCAATGCATGTAATTTTAACTTTTATAAGCGAGCTGCAAGTTAAAATACATATACATCTCTTATGAATGAGAA 115 7800861 0.986669353 11 112 968 0.946564885 1.792391689 0.198473282 0.113043478 0.221374046 115 6 1 124 2R:7800789-7800883 7 Nop17l FBtr0088902|FBtr0088900|FBtr0088901 7800783|7800783|7800783 7801442|7801442|7801442 CAATGCA 7mer-m8 dme-miR-33-5p 2R - 7800838 7800893 3'utr Nop17l FlyBase G15746.1 AGCTACGTACATGTTTAGAAGCACTGGCTGAATCAATGCATGTAATTTTAACTTTT 66 7800861 0.745426149 10 65 448 0.990291262 2.008600172 0.213592233 0.439393939 0.640776699 66 1 0 102 2R:7800838-7800893 7 84 1279 FBgn0033224 692.0466667 23.42333333 35.88666667 0.121379098 3.586167639 2.340702211 1 1 1 0.2 dme-miR-8-3p 7mer-A1 AGTATTA 2R 7800931 7800937 - 2R_7800931_7800937_- 0.820979849 0.796364998 0.808672423 0.017405292 Nop17l FBtr0088901|FBtr0088902|FBtr0088900 7800783|7800783|7800783 7801442|7801442|7801442 2R - 7800903 7801011 3'utr Nop17l FlyBase G20759.1 TGGCTCCATGCTCAGCTCATATAACAATCATAACACGATAAACCTAAACAATATCAATAGTTAACAATTCCTCTAGTATTACACACAACAAAATCACCCAATGCATAAG 26 7800937 0.974049211 13 23 153 0.911764706 1.190331698 0.029411765 0.192307692 0.382352941 26 2 1 31 2R:7800903-7801011 7 Nop17l FBtr0088902|FBtr0088900|FBtr0088901 7800783|7800783|7800783 7801442|7801442|7801442 AGTATTA 7mer-A1 dme-miR-8-3p 2R - 7800898 7800955 3'utr Nop17l FlyBase G15747.1 ATAGTTAACAATTCCTCTAGTATTACACACAACAAAATCACCCAATGCATAAGTAGAG 9 7800938 0.757729228 4 7 45 0.714285714 0.698970004 0 0.444444444 0.642857143 9 3 1 10 2R:7800898-7800955 7 9.5 1280 FBgn0033224 692.0466667 23.42333333 35.88666667 0.013727398 0.405578483 0.264722274 0 1 0.5 0.2 dme-miR-965-3p 6mer3-8 TACGCT 2R 7801142 7801147 - 2R_7801142_7801147_- 0.999826632 0.999499008 0.99966282 0.000231648 Nop17l FBtr0088901|FBtr0088902|FBtr0088900 7800783|7800783|7800783 7801442|7801442|7801442 2R - 7801127 7801159 3'utr Nop17l FlyBase G20761.1 AAGATGAAATCCTACGCTGAACTGAAAAAGAAA 14 7801144 0.871131382 4 12 45 0.8125 1.113943352 0.3125 0.142857143 0.25 14 3 0 13 2R:7801127-7801159 6 Nop17l FBtr0088902|FBtr0088900|FBtr0088901 7800783|7800783|7800783 7801442|7801442|7801442 TACGCT 6mer3-8 dme-miR-965-3p 2R - 7801111 7801155 3'utr Nop17l FlyBase G15748.2 TGAAATCCTACGCTGAACTGAAAAAGAAACCTATTATTATAGATC 11 7801146 0.724848605 4 9 50 0.823529412 0.84509804 0.294117647 0.454545455 0.647058824 11 2 1 14 2R:7801111-7801155 6 12 1281 FBgn0033224 692.0466667 23.42333333 35.88666667 0.017339871 0.512309663 0.33438603 -3 -1 -2 0.2 dme-miR-1008-3p 6mer3-8 AGCTGT 2R 7809438 7809443 + 2R_7809438_7809443_+ 0.805759587 0.782924495 0.794342041 0.016146854 sax FBtr0308825|FBtr0088832|FBtr0088833 7809418|7809418|7809418 7810067|7810067|7810067 2R + 7809271 7809455 stop_codon sax FlyBase G13672.1 TAATGACTGGCATGTCCAAGCTCATGAAGGAGTGCTGGCACCAAAACCCCGACGTGCGCTTGCCAGCGCTGCGCATCAAAAAGACTATACATAAGCTGGCTTCCGCTGACGAGAAGATACGCCTGGACTTCGACGAGGTCTGCGTTTAGTGGTAGTAGTCGAGCCTTAGCTGTAAGCGGTAATTT 164 7809436 0.833178411 21 160 801 0.980099502 2.294466226 0.373134328 0.195121951 0.343283582 164 4 0 197 2R:7809271-7809455 6 sax FBtr0088833|FBtr0308825|FBtr0088832 7809418|7809418|7809418 7810067|7810067|7810067 AGCTGT 6mer3-8 dme-miR-1008-3p 2R + 7809317 7809451 stop_codon sax FlyBase G10408.1 CCCCGACGTGCGCTTGCCAGCGCTGCGCATCAAAAAGACTATACATAAGCTGGCTTCCGCTGACGAGAAGATACGCCTGGACTTCGACGAGGTCTGCGTTTAGTGGTAGTAGTCGAGCCTTAGCTGTAAGCGGTA 115 7809436 0.918995346 11 113 625 0.983146067 1.765916794 0.494382022 0.382608696 0.601123596 115 1 2 175 2R:7809317-7809451 6 70 1282 FBgn0003317 608.98 30.24 46.27666667 0.114946304 2.314814815 1.51264136 2 2 2 0.2 dme-miR-305-5p 7mer-A1 GTACAAA 2R 7810003 7810009 + 2R_7810003_7810009_+ 0.782888031 0.782865672 0.782876852 1.58E-05 sax FBtr0308825|FBtr0088832|FBtr0088833 7809418|7809418|7809418 7810067|7810067|7810067 2R + 7809790 7810065 3'utr sax FlyBase G13674.1 ATTGTTCATCAAGTGCCATTTGCAATTGAGAATTGTAAACGCCTTAACTTTAAGCTCACTCTTTGAACTTTACACTAAATTCATAACTCTAGAACTTGTCCATGCTATGATAAAACCATAAGCCACACCACCAACTGACTTGCTATCTTAGTTAGTTAAGCCTTTAGGACTTAGATACCCACGCATAGAAGCATACACACCTACTTGTATATTGTACAAATGGCAAGCTATTTAAGTTTTGTATAGTCTAAACGAAATGAAATACACGAATAGGCA 152 7810000 0.94802794 36 146 1070 0.974747475 2.285557309 0.126262626 0.263157895 0.434343434 152 5 0 193 2R:7809790-7810065 7 sax FBtr0088833|FBtr0308825|FBtr0088832 7809418|7809418|7809418 7810067|7810067|7810067 GTACAAA 7mer-A1 dme-miR-305-5p 2R + 7809783 7810060 3'utr sax FlyBase G10411.1 ATTATTCATTGTTCATCAAGTGCCATTTGCAATTGAGAATTGTAAACGCCTTAACTTTAAGCTCACTCTTTGAACTTTACACTAAATTCATAACTCTAGAACTTGTCCATGCTATGATAAAACCATAAGCCACACCACCAACTGACTTGCTATCTTAGTTAGTTAAGCCTTTAGGACTTAGATACCCACGCATAGAAGCATACACACCTACTTGTATATTGTACAAATGGCAAGCTATTTAAGTTTTGTATAGTCTAAACGAAATGAAATACACGAAT 104 7810001 0.982192411 26 96 712 0.891156463 1.640150041 0.081632653 0.288461538 0.496598639 104 14 2 131 2R:7809783-7810060 7 63 1283 FBgn0003317 608.98 30.24 46.27666667 0.103451673 2.083333333 1.361377224 3 2 2.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 7915134 7915140 - 2R_7915134_7915140_- 0.534606421 0.487607139 0.51110678 0.033233524 CG12159 FBtr0088889|FBtr0088889|FBtr0088889 7915025|7915025|7915025 7915167|7915167|7915167 2R - 7915045 7915158 3'utr CG12159 FlyBase G20817.1 AAGGAAAACAAAACCACTTGTGATAACGATTACGATGATATGTATGCAAGGCATTAAAAATCTCATAAATACCAATGCTTTCAAATCGCCTCTGCGTCGATGTTCCATATAAAT 60 7915141 0.963796414 14 56 290 0.950617284 1.40936947 0.135802469 0.266666667 0.456790123 60 2 2 77 2R:7915045-7915158 7 CG12159 FBtr0088889|FBtr0088889|FBtr0088889 7915025|7915025|7915025 7915167|7915167|7915167 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 7915083 7915159 3'utr CG12159 FlyBase G15799.1 AAAGGAAAACAAAACCACTTGTGATAACGATTACGATGATATGTATGCAAGGCATTAAAAATCTCATAAATACCAAT 33 7915141 0.937503461 7 33 130 1 1.633468456 0.046511628 0.303030303 0.465116279 33 0 0 43 2R:7915083-7915159 7 34 1284 FBgn0033232 247.6666667 34.99333333 53.14 0.137281292 0.971613641 0.639819345 1 1 1 0.2 dme-miR-283-5p 6mer3-8 TGATAT 2R 7929856 7929861 - 2R_7929856_7929861_- 0.803457843 0.610086167 0.706772005 0.13673437 CG30381 FBtr0113374|FBtr0339129 7929656|7929656 7929980|7929980 2R - 7929842 7929884 3'utr CG30381 FlyBase G20828.1 GTTTGCATAGAAAACTCACTTATTGATATAGTTAAAGCGACTT 9 7929865 0.827672349 4 9 71 1 1.041392685 0.181818182 0.222222222 0.363636364 9 0 0 11 2R:7929842-7929884 6 CG30381 FBtr0339129|FBtr0113374 7929656|7929656 7929980|7929980 TGATAT 6mer3-8 dme-miR-283-5p 2R - 7929829 7929891 3'utr CG30381 FlyBase G15807.1 ATATGCTGTTTGCATAGAAAACTCACTTATTGATATAGTTAAAGCGACTTCAGCAGCTTCGAA 9 7929864 0.984813254 7 9 71 1 1.079181246 0.083333333 0.333333333 0.5 9 0 0 12 2R:7929829-7929891 6 7 1285 FBgn0050381 66.98 6.973333333 10.62333333 0.104508809 1.003824092 0.65892689 4 3 3.5 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 2R 7942171 7942177 - 2R_7942171_7942177_- 0.52121656 0.521223161 0.52121986 4.67E-06 CG14764 FBtr0088880|FBtr0339128 7942041|7942041 7942634|7942634 2R - 7942153 7942203 3'utr CG14764 FlyBase G20843.1 ATAAAAACATCAAATGGCATACATTTTGTGATTGTATTTTATAGTTACTCA 160 7942179 0.672975227 9 152 1942 0.949748744 1.674401813 0.125628141 0.1875 0.346733668 160 7 3 189 2R:7942153-7942203 7 CG14764 FBtr0339128|FBtr0088880 7942041|7942041 7942634|7942634 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 7942121 7942201 3'utr CG14764 FlyBase G15816.1 AAAAACATCAAATGGCATACATTTTGTGATTGTATTTTATAGTTACTCACGCGTAGACAAACATATACAGTATATAAATAT 124 7942179 0.865553592 13 117 1413 0.946808511 1.551449998 0.14893617 0.362903226 0.579787234 124 6 4 178 2R:7942121-7942201 7 138 1286 FBgn0033236 872.35 39.06666667 59.99333333 0.158193386 3.532423208 2.300255584 2 2 2 0.2 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 7966475 7966480 + 2R_7966475_7966480_+ 0.807777241 0.995453435 0.901615338 0.132707114 nito FBtr0088857 7965281 7966686 2R + 7966448 7966496 3'utr nito FlyBase G13749.1 AATCCGAGCAGTTCACCCAGTGCATGTGCTGTGTATGCGTGTGTTCGCA 9 7966472 0.918889718 2 9 81 1 1 0.2 0.111111111 0.2 9 0 0 10 2R:7966448-7966496 6 nito FBtr0088857 7965281 7966686 GCTGTG 6mer2-7 dme-miR-1008-3p 2R + 7966453 7966493 3'utr nito FlyBase G10468.1 GAGCAGTTCACCCAGTGCATGTGCTGTGTATGCGTGTGTTC 4 7966473 0.984592317 3 4 35 1 0.84509804 0 0.5 0.714285714 4 0 0 7 2R:7966453-7966493 6 6.5 1287 FBgn0027548 736.9233333 25.16 38.30666667 0.008820456 0.258346582 0.169683258 3 2 2.5 0.2 dme-miR-282-5p 6mer3-8 AGAGGC 2R 7969139 7969144 - 2R_7969139_7969144_- 0.999709792 0.999831239 0.999770515 8.58E-05 CG8726 FBtr0088874|FBtr0088873|FBtr0301231 7968127|7968127|7968127 7969258|7969258|7969823 2R - 7969131 7969172 3'utr CG8726 FlyBase G20867.1 ACTAATCGAATTCCAAAAGCTACATTTTAGAGGCATATTAAG 7 7969162 0.815869123 4 6 42 0.909090909 1 0 0.571428571 0.727272727 7 1 0 10 2R:7969131-7969172 6 CG8726 FBtr0301231|FBtr0088874|FBtr0088873 7968127|7968127|7968127 7969823|7969258|7969258 AGAGGC 6mer3-8 dme-miR-282-5p 2R - 7969081 7969179 3'utr CG8726 FlyBase G15833.1 AACTTGAACTAATCGAATTCCAAAAGCTACATTTTAGAGGCATATTAAGAAACAGAATACTAGCAGATCGAAGACACCGCTGAGCATAGAATAGTCCCA 9 7969162 0.970068225 6 9 49 1 1.113943352 0 0.444444444 0.615384615 9 0 0 13 2R:7969081-7969179 6 3.5 1288 FBgn0033244 852.3333333 30.71666667 47.01 0.004106375 0.113944655 0.074452244 18 18 18 0.2 dme-miR-276a-3p 6mer2-7 GTTCCT 2R 8075716 8075721 + 2R_8075716_8075721_+ 0.995479034 0.987949056 0.991714045 0.005324443 lig FBtr0330630 8075416 8078815 2R + 8075698 8075762 3'utr lig FlyBase G13790.1 AGTGCGCCCATGCTAAATGTTCCTTACGCCTACTTCTATGGTGGCAATGTAATGCCCGGTAGTTT 41 8075715 0.824223447 7 38 279 0.936170213 1.342422681 0.106382979 0.175 0.29787234 40 2 1 44 2R:8075698-8075762 6 lig FBtr0330630 8075416 8078815 GTTCCT 6mer2-7 dme-miR-276a-3p 2R + 8075698 8075763 3'utr lig FlyBase G10492.1 AGTGCGCCCATGCTAAATGTTCCTTACGCCTACTTCTATGGTGGCAATGTAATGCCCGGTAGTTTT 31 8075715 0.898343073 5 29 198 0.976190476 1.311753861 0.095238095 0.3 0.5 30 0 1 41 2R:8075698-8075763 6 30 1289 FBgn0020279 5206.013333 127.7666667 197.3133333 0.005762567 0.234803026 0.152042437 1 1 1 0.2 dme-miR-14-3p 6mer2-7 AGACTG 2R 8076017 8076022 + 2R_8076017_8076022_+ 0.999825376 0.999957378 0.999891377 9.33E-05 lig FBtr0330630 8075416 8078815 2R + 8075975 8076079 3'utr lig FlyBase G13792.1 AGGGCGGCTACTCGTCGAGCGTGAATCAGCAGAGCAAAACTCAGACTGTGTCCAACCAGTCGCAGGCAGGCACTGGATCCGATCTGACCTCTTCTATGTACGGAA 40 8076015 0.934436514 10 39 153 0.962264151 1.707570176 0.150943396 0.3 0.471698113 40 2 0 51 2R:8075975-8076079 6 lig FBtr0330630 8075416 8078815 AGACTG 6mer2-7 dme-miR-14-3p 2R + 8075976 8076037 3'utr lig FlyBase G10493.1 GGGCGGCTACTCGTCGAGCGTGAATCAGCAGAGCAAAACTCAGACTGTGTCCAACCAGTCGC 16 8076015 0.930839993 4 15 55 0.892857143 0.795880017 0.142857143 0.4375 0.678571429 16 0 3 25 2R:8075976-8076037 6 22.5 1290 FBgn0020279 5206.013333 127.7666667 197.3133333 0.004321925 0.17610227 0.114031828 2 2 2 0.2 dme-miR-308-3p 8mer-m1 CTGTGATT 2R 8076777 8076784 + 2R_8076777_8076784_+ 0.333285574 0.309790335 0.321537955 0.016613686 lig FBtr0100575 8076675 8077042 2R + 8076764 8076800 3'utr lig FlyBase G13795.1 GTACACTTGTTGACTGTGATTACATATAGGTTTATGT 16 8076774 0.69163216 4 16 153 1 1.278753601 0.052631579 0.1875 0.315789474 16 0 0 19 2R:8076764-8076800 8 lig FBtr0100575 8076675 8077042 CTGTGATT 8mer-m1 dme-miR-308-3p 2R + 8076763 8076804 3'utr lig FlyBase G10497.1 TGTACACTTGTTGACTGTGATTACATATAGGTTTATGTCCTT 19 8076773 0.670633392 7 18 185 0.9375 1.477121255 0.03125 0.421052632 0.65625 19 2 0 30 2R:8076763-8076804 8 17.5 1291 FBgn0020279 5206.013333 127.7666667 197.3133333 0.003361497 0.136968432 0.088691421 3 4 3.5 0.2 dme-miR-13b-2-5p 8mer-m1 TTTGACGC 2R 8079035 8079042 - 2R_8079035_8079042_- 0.562111993 0.427154635 0.494633314 0.095429293 Vps28 FBtr0310370 8078867 8079317 2R - 8079028 8079081 3'utr Vps28 FlyBase G20923.1 CTAATAAAAGGTGCATCTTCAATCTTCATGGATCAGTATTTTGACGCATATAGG 13 8079041 0.939967458 6 11 106 0.882352941 0.875061263 0 0.307692308 0.470588235 13 1 1 15 2R:8079028-8079081 8 Vps28 FBtr0310370 8078867 8079317 TTTGACGC 8mer-m1 dme-miR-13b-2-5p 2R - 8079032 8079070 3'utr Vps28 FlyBase G15871.1 TGCATCTTCAATCTTCATGGATCAGTATTTTGACGCATA 10 8079049 0.956123103 6 9 71 0.866666667 0.636822098 0.133333333 0.4 0.6 10 0 2 13 2R:8079032-8079070 8 9 1292 FBgn0021814 287.86 39.29666667 59.69 0.031265198 0.229027059 0.150779025 -1 7 3 0.2 dme-miR-283-5p 7mer-A1 GATATTA 2R 8079259 8079265 - 2R_8079259_8079265_- 0.646708834 0.723590989 0.685149912 0.054363925 Vps28 FBtr0310370 8078867 8079317 2R - 8079220 8079338 stop_codon Vps28 FlyBase G20924.1 AAGCTGCTGCACAGCCAGTAGCTATCAGTTTCTCATTGTTTACGTGTATCCCTAAATTTATATAGCATGTTCCGATATTAAACAAGTTTGATATATCACCTTACTTTTAGCGCAGACTA 31 8079271 0.989249939 10 28 273 0.923076923 1.255272505 0.076923077 0.258064516 0.41025641 31 2 1 36 2R:8079220-8079338 7 Vps28 FBtr0310370 8078867 8079317 GATATTA 7mer-A1 dme-miR-283-5p 2R - 8079245 8079325 stop_codon Vps28 FlyBase G15872.1 GCCAGTAGCTATCAGTTTCTCATTGTTTACGTGTATCCCTAAATTTATATAGCATGTTCCGATATTAAACAAGTTTGATAT 20 8079271 0.988412363 8 19 185 0.967741935 1.477121255 0.064516129 0.35 0.580645161 20 1 0 30 2R:8079245-8079325 7 16.5 1293 FBgn0021814 287.86 39.29666667 59.69 0.05731953 0.419882942 0.276428212 6 6 6 0.2 dme-miR-305-5p 7mer-A1 GTACAAA 2R 8086793 8086799 + 2R_8086793_8086799_+ 0.767079996 0.782122765 0.774601381 0.010636866 sut1 FBtr0088777 8086579 8087151 2R + 8086770 8086806 3'utr sut1 FlyBase G13808.2 CCGCCTAGCCTGTAAGTTCTTTTGTACAAACCAATAA 9 8086791 0.68849166 2 8 69 1 1.113943352 0 0.222222222 0.461538462 9 0 0 13 2R:8086770-8086806 7 sut1 FBtr0088777 8086579 8087151 GTACAAA 7mer-A1 dme-miR-305-5p 2R + 8086772 8086805 3'utr sut1 FlyBase G10511.1 GCCTAGCCTGTAAGTTCTTTTGTACAAACCAATA 8 8086791 0.97754337 2 8 59 1 1.041392685 0 0.375 0.545454545 8 0 0 11 2R:8086772-8086805 7 8 1294 FBgn0028563 340.6433333 17.19333333 26.42666667 0.023484975 0.465296627 0.302724521 2 2 2 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT 2R 8101980 8101986 + 2R_8101980_8101986_+ 0.658408207 0.657950523 0.658179365 0.000323643 CG11210 FBtr0088781 8101903 8102306 2R + 8101947 8102058 3'utr CG11210 FlyBase G13825.1 TATCTACAAAAGCCACTAAGAACTTTTCAAGTTGGCAGCTTTGATTTGCATACGAAAGAATGACAGGAGGATAACAGCAAGGCAATTTGTGATACCTAAACCAGCCTCAATG 601 8101978 0.981650021 17 576 5224 0.959654179 1.64738297 0.103746398 0.141430948 0.25648415 601 14 14 666 2R:8101947-8102058 7 CG11210 FBtr0088781 8101903 8102306 GGCAGCT 7mer-m8 dme-miR-980-3p 2R + 8101952 8102056 3'utr CG11210 FlyBase G10524.1 ACAAAAGCCACTAAGAACTTTTCAAGTTGGCAGCTTTGATTTGCATACGAAAGAATGACAGGAGGATAACAGCAAGGCAATTTGTGATACCTAAACCAGCCTCAA 421 8101978 0.895021184 17 401 3635 0.958333333 1.562642679 0.106481481 0.363420428 0.586419753 421 11 16 621 2R:8101952-8102056 7 434.5 1295 FBgn0033259 595.3333333 24.97666667 38.03333333 0.729843225 17.39623649 11.42418931 2 2 2 0.2 dme-bantam-3p 6mer3-8 TGATCT 2R 8102109 8102114 + 2R_8102109_8102114_+ 0.99999551 0.982805055 0.991400282 0.012155448 CG11210 FBtr0088781 8101903 8102306 2R + 8102077 8102129 3'utr CG11210 FlyBase G13826.1 CTGCACGCGAAAGCGATAGCAATATTTATTTCTGATCTGTATATAATCTACCT 21 8102102 0.991404109 9 19 208 0.956521739 1.041392685 0.086956522 0.095238095 0.173913043 21 0 1 22 2R:8102077-8102129 6 CG11210 FBtr0088781 8101903 8102306 TGATCT 6mer3-8 dme-bantam-3p 2R + 8102065 8102145 3'utr CG11210 FlyBase G10525.1 TTAATATGACCCCTGCACGCGAAAGCGATAGCAATATTTATTTCTGATCTGTATATAATCTACCTAATTTCCCAATTTTAT 17 8102102 0.993665925 8 15 179 0.88 1.342422681 0 0.411764706 0.6 17 3 0 22 2R:8102065-8102145 6 16.5 1296 FBgn0033259 595.3333333 24.97666667 38.03333333 0.027715566 0.660616575 0.433829974 7 7 7 0.2 dme-miR-8-3p 7mer-m8 CAGTATT 2R 8114400 8114406 - 2R_8114400_8114406_- 0.566754972 0.65250858 0.609631776 0.060636952 Asap FBtr0300954|FBtr0339300 8114284|8114284 8115265|8115265 2R - 8114315 8114423 3'utr Asap FlyBase G20953.1 ATTTTGTATACACGTTTCAGTATTTATTTAGCAAAACCTTAAAGCATATTGATATTATATGTAAGTCAAATAAACGGAAGAACATAACGCTTATTACATATATACACAT 93 8114377 0.835306613 14 86 843 0.93 1.667452953 0.14 0.064516129 0.13 93 6 1 93 2R:8114315-8114423 7 Asap FBtr0339300|FBtr0300954 8114284|8114284 8115265|8115265 CAGTATT 7mer-m8 dme-miR-8-3p 2R - 8114317 8114427 3'utr Asap FlyBase G15890.1 ACTCATTTTGTATACACGTTTCAGTATTTATTTAGCAAAACCTTAAAGCATATTGATATTATATGTAAGTCAAATAAACGGAAGAACATAACGCTTATTACATATATACAC 46 8114408 0.799174248 12 43 420 0.953846154 1.491361694 0.076923077 0.304347826 0.507692308 46 2 1 62 2R:8114317-8114427 7 24 1297 FBgn0050372 698.41 18.11666667 27.74 0.034363769 1.32474701 0.86517664 -29 2 -13.5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2R 8114589 8114594 - 2R_8114589_8114594_- 0.975743482 0.976152791 0.975948136 0.000289419 Asap FBtr0300954|FBtr0339300 8114284|8114284 8115265|8115265 2R - 8114567 8114617 3'utr Asap FlyBase G20956.1 AAAAAGAAGAGCAAAAGCCCTTTGTACCTAGAAGTTGTTACCAATTAAGTA 59 8114595 0.968369066 3 59 328 1 1.826074803 0.089552239 0.118644068 0.223880597 59 0 0 67 2R:8114567-8114617 6 Asap FBtr0339300|FBtr0300954 8114284|8114284 8115265|8115265 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2R - 8114568 8114614 3'utr Asap FlyBase G15891.1 AAGAAGAGCAAAAGCCCTTTGTACCTAGAAGTTGTTACCAATTAAGT 40 8114595 0.974265662 3 38 236 0.925925926 1.698970004 0.037037037 0.275 0.462962963 40 4 0 50 2R:8114568-8114614 6 49.5 1298 FBgn0050372 698.41 18.11666667 27.74 0.070875274 2.732290708 1.78442682 1 1 1 0.2 dme-miR-277-3p 7mer-m8 TGCATTT 2R 8114992 8114998 - 2R_8114992_8114998_- 0.407780039 0.367983562 0.387881801 0.028140304 Asap FBtr0300954|FBtr0339300 8114284|8114284 8115265|8115265 2R - 8114908 8115028 3'utr Asap FlyBase G20959.1 AATCAAAGCCTTTAAGTAGCGATCTTGCTGTGCATTTCCCGTTGGCTTCCTTCATAAGGTTAGCGCTTTAATAACTGAATATGTCCTGCAAATGCTGTAATTCGTACCATAACTAGATCTA 84 8115003 0.878334542 17 81 670 0.95959596 1.977723605 0.090909091 0.154761905 0.282828283 84 4 0 95 2R:8114908-8115028 7 Asap FBtr0339300|FBtr0300954 8114284|8114284 8115265|8115265 TGCATTT 7mer-m8 dme-miR-277-3p 2R - 8114838 8115076 3'utr Asap FlyBase G15892.1 AAGTTACTCTTAGCTTAGAAGCCAACTACTCATTTACACTTGTATTTCAATCAAAGCCTTTAAGTAGCGATCTTGCTGTGCATTTCCCGTTGGCTTCCTTCATAAGGTTAGCGCTTTAATAACTGAATATGTCCTGCAAATGCTGTAATTCGTACCATAACTAGATCTAACTTTAACTTAGCCTAAAACGCTGTGCGCAAAAGTTACTCAATGTCAGAAGAATTGTCGGGAGATAAGCT 82 8115004 0.892757701 29 78 627 0.944 1.594760753 0.112 0.353658537 0.576 82 5 2 118 2R:8114838-8115076 7 39 1299 FBgn0050372 698.41 18.11666667 27.74 0.055841125 2.152713891 1.40591204 5 6 5.5 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT 2R 8129313 8129319 + 2R_8129313_8129319_+ 0.645985337 0.63727905 0.641632194 0.006156213 Socs44A FBtr0088784 8128794 8129476 2R + 8129254 8129335 3'utr Socs44A FlyBase G13846.3 ATTTTTGTATTCCTAACTTGGACACTAACTTTTTGCTAATCTAGATTGCATGGAATTTAGGCAGCTTTACGGCAATCGAATA 90 8129320 0.760770134 13 84 578 0.964912281 1.740362689 0.175438596 0.211111111 0.377192982 90 3 1 110 2R:8129254-8129335 7 Socs44A FBtr0088784 8128794 8129476 GGCAGCT 7mer-m8 dme-miR-980-3p 2R + 8129293 8129378 3'utr Socs44A FlyBase G10542.1 TCTAGATTGCATGGAATTTAGGCAGCTTTACGGCAATCGAATACGTTCAATGCCAATTACTCTTGTTGCAACGTGTATGTATTTTA 74 8129320 0.778587119 12 71 510 0.963636364 2.025305865 0.236363636 0.405405405 0.6 74 4 0 106 2R:8129293-8129378 7 71 1300 FBgn0033266 360.15 23.80333333 36.32666667 0.197140081 2.982775522 1.954487062 -7 -7 -7 0.2 dme-miR-1006-3p 7mer-A1 GAATTTA 2R 8134179 8134185 + 2R_8134179_8134185_+ 0.787999884 0.507962371 0.647981127 0.198016415 Pabp2 FBtr0088785 8133179 8134374 2R + 8134144 8134213 3'utr Pabp2 FlyBase G13857.1 ATATATAGAGTAAAGAGAAGATAAGAAAAGAAGTTGAATTTACTAAAGCGAAAAAGATGAAGACAAATAT 46 8134177 0.915174772 9 45 185 0.981132075 1.716003344 0.188679245 0.130434783 0.245283019 46 1 0 52 2R:8134144-8134213 7 Pabp2 FBtr0088785 8133179 8134374 GAATTTA 7mer-A1 dme-miR-1006-3p 2R + 8134145 8134205 3'utr Pabp2 FlyBase G10555.1 TATATAGAGTAAAGAGAAGATAAGAAAAGAAGTTGAATTTACTAAAGCGAAAAAGATGAAG 22 8134177 0.957730616 4 22 102 1 1.397940009 0.36 0.090909091 0.2 22 0 0 25 2R:8134145-8134205 7 25 1301 FBgn0005648 3045.73 202.1266667 313.4 0.008208213 0.123684818 0.079770262 2 2 2 0.2 dme-miR-2a-2-5p 8mer-m1 TGATGAGG 2R 8137079 8137086 - 2R_8137079_8137086_- 0.398934428 0.398616459 0.398775443 0.000224789 Lpin FBtr0303583|FBtr0303573|FBtr0303584|FBtr0113055 8136984|8136984|8136984|8136984 8137486|8137486|8137486|8137486 2R - 8137019 8137157 3'utr Lpin FlyBase G20993.1 AGACGGCGCATAGGAGTTGTGATTTTGATTTCATTATTTTTCGTATGTGATCATTTAAATTAAGTTAATTGTGATGAGGTTTTTATTTGAAGTTTTTATGAAAACTGTGCTCTAAACCTATGTATACTTAACTGATAGT 283 8137090 0.822479914 30 253 2521 0.91954023 1.359021943 0.227011494 0.173144876 0.327586207 283 15 13 320 2R:8137019-8137157 8 Lpin FBtr0303573|FBtr0113055|FBtr0303583|FBtr0303584 8136984|8136984|8136984|8136984 8137486|8137486|8137486|8137486 TGATGAGG 8mer-m1 dme-miR-2a-2-5p 2R - 8136985 8137157 3'utr Lpin FlyBase G15918.1 AGACGGCGCATAGGAGTTGTGATTTTGATTTCATTATTTTTCGTATGTGATCATTTAAATTAAGTTAATTGTGATGAGGTTTTTATTTGAAGTTTTTATGAAAACTGTGCTCTAAACCTATGTATACTTAACTGATAGTGTTTCAATACCAATAAATGCTTCAAATTCAAACA 189 8137090 0.98958929 31 169 1771 0.876865672 1.416825353 0.23880597 0.285714286 0.496268657 189 25 8 235 2R:8136985-8137157 8 60 1302 FBgn0263593 1170.44 33.67 51.33333333 0.051262773 1.782001782 1.168831169 4 4 4 0.2 dme-miR-305-3p 8mer-A1 ATGTGCCA 2R 8138124 8138131 - 2R_8138124_8138131_- 0.568147999 0.430732331 0.499440165 0.097167573 Lpin FBtr0303577|FBtr0303585|FBtr0303575|FBtr0303578|FBtr0088815|FBtr0303574 8137986|8137986|8137986|8137986|8137986|8137986 8138234|8138234|8138234|8138234|8138234|8138234 2R - 8138109 8138172 3'utr Lpin FlyBase G20999.1 AAGAGAGTTAGGATTGTGCTATACCTGTATGTCTGTGCCTGATGTGCCAGGTCAGCGAGCTCCA 46 8138139 0.699495751 6 44 356 0.962264151 1.707570176 0.245283019 0.130434783 0.245283019 46 2 0 51 2R:8138109-8138172 8 Lpin FBtr0303578|FBtr0303575|FBtr0088815|FBtr0303574|FBtr0303577|FBtr0303585 8137986|8137986|8137986|8137986|8137986|8137986 8138234|8138234|8138234|8138234|8138234|8138234 ATGTGCCA 8mer-A1 dme-miR-305-3p 2R - 8138109 8138174 3'utr Lpin FlyBase G15922.1 TTAAGAGAGTTAGGATTGTGCTATACCTGTATGTCTGTGCCTGATGTGCCAGGTCAGCGAGCTCCA 29 8138139 0.709045539 8 28 221 0.97826087 1.653212514 0.173913043 0.379310345 0.608695652 29 1 0 45 2R:8138109-8138174 8 29 1303 FBgn0263593 1170.44 33.67 51.33333333 0.024777007 0.861300861 0.564935065 8 8 8 0.2 dme-miR-980-3p 6mer2-7 GCAGCT 2R 8138195 8138200 - 2R_8138195_8138200_- 0.973884297 0.990188435 0.982036366 0.01152874 Lpin FBtr0303577|FBtr0303585|FBtr0303575|FBtr0303578|FBtr0088815|FBtr0303574 8137986|8137986|8137986|8137986|8137986|8137986 8138234|8138234|8138234|8138234|8138234|8138234 2R - 8138189 8138220 3'utr Lpin FlyBase G21000.1 TAGCCCCAGTCGAAGGTTGTGCAGCTTGCAAA 5 8138203 0.718894525 3 5 21 1 0.698970004 0.2 0 0 5 0 0 5 2R:8138189-8138220 6 Lpin FBtr0303578|FBtr0303575|FBtr0088815|FBtr0303574|FBtr0303577|FBtr0303585 8137986|8137986|8137986|8137986|8137986|8137986 8138234|8138234|8138234|8138234|8138234|8138234 GCAGCT 6mer2-7 dme-miR-980-3p 2R - 8138188 8138225 3'utr Lpin FlyBase G15923.1 AGTCCTAGCCCCAGTCGAAGGTTGTGCAGCTTGCAAAT 11 8138194 0.956972445 4 11 55 1 1.113943352 0.076923077 0.181818182 0.307692308 11 0 0 13 2R:8138188-8138225 6 7.5 1304 FBgn0263593 1170.44 33.67 51.33333333 0.006407847 0.222750223 0.146103896 3 -6 -1.5 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 8225969 8225976 + 2R_8225969_8225976_+ 0.60364571 0.532341708 0.567993709 0.050419542 LRP1 FBtr0344893|FBtr0344894 8225414|8225414 8226438|8226438 2R + 8225850 8225998 3'utr LRP1 FlyBase G13939.1 ATTGCCCAAAAGCAGCCTAGTTAACATTTAAACGGAGGAATCATTCGAGCACTCACTAACAATTTGCCAATTAGTGAATGCGGGCGAAATCGAAATCGCCTCTTGAGATTGACCAAATATGCATTTAAATTAATTAAGTATTCACAAAG 70 8225953 0.774345923 19 69 441 0.987654321 1.903089987 0.086419753 0.157142857 0.271604938 70 1 0 80 2R:8225850-8225998 8 LRP1 FBtr0344893|FBtr0344894 8225414|8225414 8226438|8226438 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 8225850 8225990 3'utr LRP1 FlyBase G10604.1 ATTGCCCAAAAGCAGCCTAGTTAACATTTAAACGGAGGAATCATTCGAGCACTCACTAACAATTTGCCAATTAGTGAATGCGGGCGAAATCGAAATCGCCTCTTGAGATTGACCAAATATGCATTTAAATTAATTAAGTAT 47 8225953 0.909663925 14 45 257 0.958333333 1.838849091 0 0.446808511 0.638888889 47 3 0 69 2R:8225850-8225990 8 20 1305 FBgn0053087 1624.95 12.3 18.76333333 0.012308071 1.62601626 1.065908687 16 16 16 0.2 dme-miR-8-3p 7mer-m8 CAGTATT 2R 8239941 8239947 + 2R_8239941_8239947_+ 0.658419622 0.658462855 0.658441238 3.06E-05 pnut FBtr0088793|FBtr0088792 8239675|8239675 8240297|8240297 2R + 8239918 8239961 3'utr pnut FlyBase G13949.1 GTACATATAACACATAGCAGTTGCAGTATTTTACCAATATATAT 38 8239938 0.820954135 4 38 304 1 1.62324929 0 0.105263158 0.19047619 38 0 0 42 2R:8239918-8239961 7 pnut FBtr0088793|FBtr0088792 8239675|8239675 8240297|8240297 CAGTATT 7mer-m8 dme-miR-8-3p 2R + 8239920 8239984 3'utr pnut FlyBase G10615.1 ACATATAACACATAGCAGTTGCAGTATTTTACCAATATATATCCACGCATTACTTGACGAAACAC 25 8239938 0.934903954 7 24 174 1 1.505149978 0 0.24 0.40625 25 0 0 32 2R:8239920-8239984 7 29.5 1306 FBgn0013726 2422.526667 120.4666667 184.8733333 0.012177369 0.244881018 0.159568714 3 3 3 0.2 dme-miR-1006-3p 7mer-A1 GAATTTA 2R 8597565 8597571 - 2R_8597565_8597571_- 0.690722534 0.823154073 0.756938303 0.093643282 CG8735 FBtr0339357|FBtr0088730 8596970|8597526 8597686|8597686 2R - 8597550 8597598 3'utr CG8735 FlyBase G21027.1 ATTTGAAAAAGAATCATCTGTTATCATGAATTTATTGTCGAAAAAAAAA 7 8597564 0.9807775 5 7 53 1 0.84509804 0.142857143 0 0 7 0 0 7 2R:8597550-8597598 7 CG8735 FBtr0339357|FBtr0088730 8596970|8597526 8597686|8597686 GAATTTA 7mer-A1 dme-miR-1006-3p 2R - 8597559 8597592 3'utr CG8735 FlyBase G15940.1 AAAAGAATCATCTGTTATCATGAATTTATTGTCG 7 8597572 0.664854065 4 5 66 0.818181818 0.954242509 0.454545455 0.428571429 0.636363636 7 2 0 9 2R:8597559-8597592 7 7 1307 FBgn0033309 330.0133333 24.15666667 37.01 0.021211264 0.289775079 0.189138071 -7 1 -3 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 8610969 8610976 + 2R_8610969_8610976_+ 0.422733625 0.427825896 0.42527976 0.0036008 rgr FBtr0088692|FBtr0339354 8610887|8610887 8611238|8612295 2R + 8610942 8610995 3'utr rgr FlyBase G13976.1 ATCGTAGGGCGTTAGATGTGTGTCCGTGTACTTAAAGTTATTTTGCCGTCTAGC 100 8610968 0.815166114 6 97 859 0.975 2.068185862 0.058333333 0.18 0.316666667 100 3 0 117 2R:8610942-8610995 8 rgr FBtr0088692|FBtr0339354 8610887|8610887 8611238|8612295 GTACTTAA 8mer-A1 dme-miR-252-5p 2R + 8610933 8611007 3'utr rgr FlyBase G10633.1 TACAAAGCAATCGTAGGGCGTTAGATGTGTGTCCGTGTACTTAAAGTTATTTTGCCGTCTAGCATATACCAATCA 91 8610968 0.951277547 8 87 756 0.957142857 2.127104798 0.035714286 0.384615385 0.6 91 6 0 134 2R:8610933-8611007 8 94 1308 FBgn0267792 576.07 20.24333333 30.99 0.163174614 4.643504034 3.033236528 1 1 1 0.2 dme-miR-184-5p 7mer-A1 GATAAGA 2R 8619784 8619790 + 2R_8619784_8619790_+ 0.477245397 0.575061702 0.52615355 0.069166569 Cirl FBtr0310449|FBtr0310450|FBtr0305080 8619651|8619651|8619651 8620151|8620151|8620151 2R + 8619704 8619859 3'utr Cirl FlyBase G13981.1 ATTTATGACCGAGAGACACATGTGATATAATGCTTAAGTAACTTAAATTGTTAATGAACCTCTCTCTGGCAGGATTCAAAGATAAGACTCAAAAGCTGTGCTGGGCAGCGATGATCACTGTTGCGTCCCAGTAACAGCTTGCACGCGAAGACTCCC 90 8619786 0.975465263 18 73 460 0.8125 1.356981401 0.232142857 0.2 0.357142857 90 18 3 91 2R:8619704-8619859 7 Cirl FBtr0305080|FBtr0310449|FBtr0310450 8619651|8619651|8619651 8620151|8620151|8620151 GATAAGA 7mer-A1 dme-miR-184-5p 2R + 8619754 8619813 3'utr Cirl FlyBase G10638.1 TTAATGAACCTCTCTCTGGCAGGATTCAAAGATAAGACTCAAAAGCTGTGCTGGGCAGCG 37 8619786 0.927644349 7 19 160 0.517857143 1.161368002 0.357142857 0.405405405 0.607142857 37 26 1 29 2R:8619754-8619813 7 39 1309 FBgn0033313 1194.753333 23.36 35.54 0.032642721 1.669520548 1.097355093 -2 -2 -2 0.2 dme-miR-263a-5p 7mer-m1 TGCCATT 2R 8623885 8623891 + 2R_8623885_8623891_+ 0.728802682 0.644999178 0.68690093 0.059258023 Cirl FBtr0290112|FBtr0305082|FBtr0305081|FBtr0301363|FBtr0310448 8623506|8623506|8623506|8623506|8623506 8625203|8625203|8625203|8624135|8625203 2R + 8623774 8623926 3'utr Cirl FlyBase G13988.1 TTGGAATCGGGCCCTTCGACTTGCATGCATTTTATACCAACTTGGAAATCGATATTAAATATAAATGTATGTACCATATATGTATGATGTATTGTAATACATGTCACCACATGCCATTTTTAAATACTTAAAAACTAATTTAAACAACCAGAA 25 8623885 0.988257074 12 21 191 0.9 1.431363764 0.166666667 0.2 0.333333333 25 3 0 27 2R:8623774-8623926 7 Cirl FBtr0305081|FBtr0301363|FBtr0310448|FBtr0290112|FBtr0305082 8623506|8623506|8623506|8623506|8623506 8625203|8624135|8625203|8625203|8625203 TGCCATT 7mer-m1 dme-miR-263a-5p 2R + 8623844 8623897 3'utr Cirl FlyBase G10644.1 GTACCATATATGTATGATGTATTGTAATACATGTCACCACATGCCATTTTTAAA 8 8623885 0.956786802 4 8 63 1 1.079181246 0.083333333 0.375 0.583333333 8 0 0 12 2R:8623844-8623897 7 7 1310 FBgn0033313 1194.753333 23.36 35.54 0.00585895 0.299657534 0.196961171 0 0 0 0.2 dme-miR-276a-3p 7mer-m8 AGTTCCT 2R 8664347 8664353 + 2R_8664347_8664353_+ 0.52897232 0.628783153 0.578877736 0.070576964 ptc FBtr0089427 8664335 8665223 2R + 8664303 8664392 stop_codon ptc FlyBase G14009.1 CAGGGCGGTGCGCAGCTATAACTTTACGAGTTAGCACTAGCACTAGTTCCTGTAGCTATTAGGACGTATCTTTAGACTCTAGCCTAAGCC 21 8664346 0.944785391 8 19 150 0.913043478 1.021189299 0.217391304 0.095238095 0.173913043 21 1 1 21 2R:8664303-8664392 7 ptc FBtr0089427 8664335 8665223 AGTTCCT 7mer-m8 dme-miR-276a-3p 2R + 8664334 8664385 stop_codon ptc FlyBase G10662.1 TAGCACTAGCACTAGTTCCTGTAGCTATTAGGACGTATCTTTAGACTCTAGC 10 8664346 0.955614806 6 10 78 1 1.301029996 0.05 0.6 0.8 10 0 0 20 2R:8664334-8664385 7 11 1311 FBgn0003892 243 5.353333333 8.3 0.04526749 2.054794521 1.325301205 1 1 1 0.2 dme-miR-252-5p 7mer-m8 GTACTTA 2R 8664859 8664865 + 2R_8664859_8664865_+ 0.523296113 0.505346601 0.514321357 0.012692213 ptc FBtr0089427 8664335 8665223 2R + 8664831 8664872 3'utr ptc FlyBase G14011.1 ATTGTAACACACGCAAAACACACACAATGTACTTACATATAA 27 8664858 0.96645889 3 23 117 0.882352941 1.176091259 0 0.185185185 0.352941176 27 3 1 30 2R:8664831-8664872 7 ptc FBtr0089427 8664335 8665223 GTACTTA 7mer-m8 dme-miR-252-5p 2R + 8664811 8664872 3'utr ptc FlyBase G10663.1 ACTTAAACTTAGAGATATTTATTGTAACACACGCAAAACACACACAATGTACTTACATATAA 18 8664858 0.965700495 3 18 87 1 1.477121255 0 0.5 0.7 18 0 0 30 2R:8664811-8664872 7 21 1312 FBgn0003892 243 5.353333333 8.3 0.086419753 3.922789539 2.530120482 1 1 1 0.2 dme-miR-2a-2-5p 8mer-A1 TGATGAGA 2R 8682043 8682050 + 2R_8682043_8682050_+ 0.599070987 0.580495519 0.589783253 0.013134862 Acsl FBtr0088700|FBtr0100430|FBtr0088701|FBtr0088699|FBtr0100428|FBtr0333001|FBtr0100431|FBtr0100427|FBtr0100429|FBtr0100426 8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604 8682791|8682791|8682339|8682791|8682791|8682339|8682791|8683022|8682791|8682791 2R + 8681950 8682166 3'utr Acsl FlyBase G14034.1 AAGCTGAGTTTGGTTTGGAAATGCGCTGTGTATGTGCTAGGAATGCTGTTCAACCGATTGACAATGATAATGGTAATGATAACTGAATGCCGATGATGAGAAGGAATATTGTATACTGTACAGTTTTCGGTTTATAGTACATTGTGTGGCAAATTTATATTGCAGAAAAATACTTATTTTTATATTAAGCTTAAGTGGTTGCCTATTAATTATGTAC 102 8682043 0.903087221 28 93 704 0.912 1.45484486 0.208 0.225490196 0.368 102 8 3 114 2R:8681950-8682166 8 Acsl FBtr0100428|FBtr0333001|FBtr0100427|FBtr0100431|FBtr0100426|FBtr0100429|FBtr0088700|FBtr0100430|FBtr0088701|FBtr0088699 8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604 8682791|8682339|8683022|8682791|8682791|8682791|8682791|8682791|8682339|8682791 TGATGAGA 8mer-A1 dme-miR-2a-2-5p 2R + 8681891 8682101 3'utr Acsl FlyBase G10682.1 ATTACTCGTTTCTCATTTTAATAAAGTTCGCAAAGACTTGCTTGGCAGATATGTAGCTGAAGCTGAGTTTGGTTTGGAAATGCGCTGTGTATGTGCTAGGAATGCTGTTCAACCGATTGACAATGATAATGGTAATGATAACTGAATGCCGATGATGAGAAGGAATATTGTATACTGTACAGTTTTCGGTTTATAGTACATTGTGTGGCAA 71 8682013 0.978200447 27 71 477 1 2.025305865 0.320754717 0.281690141 0.518867925 71 0 0 106 2R:8681891-8682101 8 21 1313 FBgn0263120 3324.373333 107.4633333 164.07 0.00631698 0.195415491 0.127994149 0 30 15 0.2 dme-miR-999-3p 6mer3-8 AGTTAA 2R 8682709 8682714 + 2R_8682709_8682714_+ 0.750537856 0.999246603 0.87489223 0.175863608 Acsl FBtr0088700|FBtr0100430|FBtr0088699|FBtr0100428|FBtr0100431|FBtr0100427|FBtr0100429|FBtr0100426 8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604 8682791|8682791|8682791|8682791|8682791|8683022|8682791|8682791 2R + 8682645 8682778 3'utr Acsl FlyBase G14039.1 AAAATGTAATAACATTTGTTTTAGATGTGCAAGAACTTTTTGAATAAATTGTAGTCATATTTTTAGTTAAACTATGTATATTTAGGAAACGTTTAGCAATTTTTTGTGGAAACGTTACGTTTCTTTTCAATAAA 33 8682683 0.990703403 15 32 320 0.975 1.591064607 0.225 0.212121212 0.35 33 1 0 39 2R:8682645-8682778 6 Acsl FBtr0100428|FBtr0100427|FBtr0100431|FBtr0100426|FBtr0100429|FBtr0088700|FBtr0100430|FBtr0088699 8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604 8682791|8683022|8682791|8682791|8682791|8682791|8682791|8682791 AGTTAA 6mer3-8 dme-miR-999-3p 2R + 8682655 8682727 3'utr Acsl FlyBase G10686.1 AACATTTGTTTTAGATGTGCAAGAACTTTTTGAATAAATTGTAGTCATATTTTTAGTTAAACTATGTATATTT 31 8682683 0.799135224 10 28 340 0.897959184 1.643452676 0.204081633 0.483870968 0.673469388 31 5 0 44 2R:8682655-8682727 6 13 1314 FBgn0263120 3324.373333 107.4633333 164.07 0.003910511 0.120971494 0.079234473 26 26 26 0.2 dme-miR-283-5p 6mer2-7 GATATT 2R 8718040 8718045 - 2R_8718040_8718045_- 0.617844744 0.624104129 0.620974436 0.004426064 CG14767 FBtr0088719|FBtr0088720|FBtr0088718 8718015|8718015|8718015 8718693|8718693|8718693 2R - 8718021 8718126 3'utr CG14767 FlyBase G21051.1 AATTATGATGATATTACCAGCAACAGTAAAGTTTTATGTGTGTACAATATCTAAATGTATACTGTGTACTAAATATGCAAAGATATTCGAATAAAAATTAGTTTAT 18 8718063 0.981216166 12 16 131 0.888888889 1.204119983 0.111111111 0 0 18 2 0 16 2R:8718021-8718126 6 CG14767 FBtr0088718|FBtr0088720|FBtr0088719 8718015|8718015|8718015 8718693|8718693|8718693 GATATT 6mer2-7 dme-miR-283-5p 2R - 8718028 8718074 3'utr CG14767 FlyBase G15957.1 AAATGTATACTGTGTACTAAATATGCAAAGATATTCGAATAAAAATT 9 8718061 0.988122105 7 8 67 0.857142857 1.079181246 0.142857143 0.555555556 0.714285714 9 2 0 12 2R:8718028-8718074 6 4 1315 FBgn0040777 1544.016667 90.17333333 137.3633333 0.002590646 0.044359012 0.029119852 18 16 17 0.2 dme-miR-11-3p 7mer-m1 TGTGATG 2R 8718382 8718388 - 2R_8718382_8718388_- 0.611757217 0.611991718 0.611874468 0.000165817 CG14767 FBtr0088719|FBtr0088720|FBtr0088718 8718015|8718015|8718015 8718693|8718693|8718693 2R - 8718357 8718411 3'utr CG14767 FlyBase G21054.1 AAGCATTAAAGCCAAAAACATATTGTGATGCTGGCGAGGAAAGCATCAATTCCTT 27 8718389 0.962657695 7 26 131 0.96969697 1.204119983 0 0.185185185 0.333333333 27 0 1 32 2R:8718357-8718411 7 CG14767 FBtr0088718|FBtr0088720|FBtr0088719 8718015|8718015|8718015 8718693|8718693|8718693 TGTGATG 7mer-m1 dme-miR-11-3p 2R - 8718314 8718403 3'utr CG14767 FlyBase G15959.1 AAGCCAAAAACATATTGTGATGCTGGCGAGGAAAGCATCAATTCCTTTTCGGCCGCATCTGACCCGATTTTAGCTGCAACAATCTGTTAG 18 8718389 0.969018511 8 18 100 1 1.380211242 0 0.277777778 0.458333333 18 0 0 24 2R:8718314-8718403 7 17.5 1316 FBgn0040777 1544.016667 90.17333333 137.3633333 0.011334075 0.194070679 0.127399355 1 1 1 0.2 dme-miR-980-3p 7mer-A1 GCAGCTA 2R 8718575 8718581 - 2R_8718575_8718581_- 0.822214318 0.805420111 0.813817214 0.011875293 CG14767 FBtr0088719|FBtr0088720|FBtr0088718 8718015|8718015|8718015 8718693|8718693|8718693 2R - 8718504 8718839 stop_codon CG14767 FlyBase G21056.1 TTGATGTAATCGGTGGCATTCCGCCTCCTCCGCCCTACAACGACGTTGCCGATGCCCAGGTGCAAGTGCCATCGCAATCGCCGCTGCATCGCCAGCCAAACATCCCGGGACAAGTATTCGGCGGACGCGACGAAAGCCAGGCTTAAACAGTACTTTCGACTGGATTGCTTCTCATGGCGAGTGGGTTGTGATCAGCGGTGACCACCCCTCTCCCATCCTCTTCTTGCCCAGATGATCTGGTTTCTGGTCCCTCATTTCGCAGCTATCATTCCCAGGCACACATACACCTTCTTAATGGTTGCTTCAATGTATTGAACACTGTTTTTAGAAAAACGA 272 8718598 0.999953233 54 254 2070 0.943396226 2 0.257861635 0.139705882 0.264150943 272 16 2 300 2R:8718504-8718839 7 CG14767 FBtr0088718|FBtr0088720|FBtr0088719 8718015|8718015|8718015 8718693|8718693|8718693 GCAGCTA 7mer-A1 dme-miR-980-3p 2R - 8718535 8718695 stop_codon CG14767 FlyBase G15961.1 AAACAGTACTTTCGACTGGATTGCTTCTCATGGCGAGTGGGTTGTGATCAGCGGTGACCACCCCTCTCCCATCCTCTTCTTGCCCAGATGATCTGGTTTCTGGTCCCTCATTTCGCAGCTATCATTCCCAGGCACACATACACCTTCTTAATGGTTGCTTC 149 8718598 0.984723318 28 135 1184 0.92173913 1.72427587 0.256521739 0.375838926 0.595652174 149 15 3 212 2R:8718535-8718695 7 48 1317 FBgn0040777 1544.016667 90.17333333 137.3633333 0.031087747 0.532308147 0.34943823 17 17 17 0.2 dme-miR-252-5p 6mer3-8 GTACTT 2R 8729550 8729555 - 2R_8729550_8729555_- 0.994101798 0.998808358 0.996455078 0.003328069 stmA FBtr0339341|FBtr0088715|FBtr0088716|FBtr0301639 8729500|8729500|8729500|8729500 8729726|8729726|8729726|8729726 2R - 8729539 8729575 3'utr stmA FlyBase G21064.1 TGTTAAACGACCCCGAATATGTACTTTGATTTAATTG 9 8729556 0.978764051 5 9 61 1 1.079181246 0 0.222222222 0.416666667 9 0 0 12 2R:8729539-8729575 6 stmA FBtr0339341|FBtr0088715|FBtr0088716|FBtr0301639 8729500|8729500|8729500|8729500 8729726|8729726|8729726|8729726 GTACTT 6mer3-8 dme-miR-252-5p 2R - 8729532 8729571 3'utr stmA FlyBase G15970.1 AAACGACCCCGAATATGTACTTTGATTTAATTGTTAGACA 11 8729557 0.977096948 5 10 72 0.933333333 1.146128036 0.066666667 0.181818182 0.4 11 1 0 14 2R:8729532-8729571 6 10 1318 FBgn0086784 383.3333333 16.82 25.63666667 0.026086957 0.594530321 0.390066311 1 2 1.5 0.2 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 8888480 8888486 - 2R_8888480_8888486_- 0.82237106 0.822525448 0.822448254 0.000109107 CG8272 FBtr0088686|FBtr0330246 8888402|8888402 8889036|8888973 2R - 8888433 8888532 3'utr CG8272 FlyBase G21079.1 AACACATTGTGGTTATAATTACAACAAGTCACTGTCACTTCTTATAAGCTTTATACGATTAAATCGTTAACTGAACTCAACTGACTTAAGTGGTTAATGT 43 8888488 0.989829548 8 40 394 0.9 1.653212514 0.02 0.139534884 0.26 43 5 0 45 2R:8888433-8888532 7 CG8272 FBtr0088686|FBtr0330246 8888402|8888402 8889036|8888973 AGCTTTA 7mer-A1 dme-miR-79-3p 2R - 8888434 8888514 3'utr CG8272 FlyBase G15981.1 TTACAACAAGTCACTGTCACTTCTTATAAGCTTTATACGATTAAATCGTTAACTGAACTCAACTGACTTAAGTGGTTAATG 23 8888488 0.974498895 8 22 194 0.966666667 1.462397998 0.033333333 0.260869565 0.433333333 23 1 0 29 2R:8888434-8888514 7 23 1319 FBgn0033337 113.6666667 4.916666667 7.516666667 0.202346041 4.677966102 3.059866962 2 2 2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2R 8888664 8888669 - 2R_8888664_8888669_- 0.730949443 0.730935379 0.730942411 9.90E-06 CG8272 FBtr0088686|FBtr0088686|FBtr0088686|FBtr0330246|FBtr0330246|FBtr0330246 8888402|8888402|8888402|8888402|8888402|8888402 8889036|8889036|8889036|8888973|8888973|8888973 2R - 8888634 8888681 3'utr CG8272 FlyBase G21080.1 GATTGTAAATTATGTGATCGGTTGCCAAAATTAAAGTTGTTTGTTTGA 7 8888671 0.990116859 5 6 62 0.7 0.84509804 0.4 0.285714286 0.5 7 3 0 7 2R:8888634-8888681 6 CG8272 FBtr0088686|FBtr0088686|FBtr0088686|FBtr0330246|FBtr0330246|FBtr0330246 8888402|8888402|8888402|8888402|8888402|8888402 8889036|8889036|8889036|8888973|8888973|8888973 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 8888635 8888685 3'utr CG8272 FlyBase G15982.1 ACACGATTGTAAATTATGTGATCGGTTGCCAAAATTAAAGTTGTTTGTTTG 9 8888659 0.882667273 3 9 76 1 1.113943352 0.384615385 0.444444444 0.615384615 9 0 0 13 2R:8888635-8888685 6 8 1320 FBgn0033337 113.6666667 4.916666667 7.516666667 0.070381232 1.627118644 1.064301552 2 -10 -4 0.2 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 8888883 8888889 - 2R_8888883_8888889_- 0.406994366 0.503785583 0.455389974 0.068441714 CG8272 FBtr0088686|FBtr0330246 8888402|8888402 8889036|8888973 2R - 8888835 8888920 3'utr CG8272 FlyBase G21082.1 CGGCCCCCAGCAGCTGGGCTATAGTTGTGAAAGCTTTAGTCAAATATACATACATATACATATATATGCAGACATATATGTATTTG 34 8888896 0.974902213 7 33 272 0.925 1.568201724 0.175 0.147058824 0.275 34 3 0 37 2R:8888835-8888920 7 CG8272 FBtr0088686|FBtr0330246 8888402|8888402 8889036|8888973 AGCTTTA 7mer-A1 dme-miR-79-3p 2R - 8888873 8888911 3'utr CG8272 FlyBase G15984.2 GCAGCTGGGCTATAGTTGTGAAAGCTTTAGTCAAATATA 17 8888886 0.715333809 6 16 126 0.892857143 0.795880017 0.142857143 0.470588235 0.678571429 17 0 3 25 2R:8888873-8888911 7 22 1321 FBgn0033337 113.6666667 4.916666667 7.516666667 0.193548387 4.474576271 2.926829268 7 -3 2 0.2 dme-miR-970-3p 6mer3-8 TCTTAT 2R 8898620 8898625 + 2R_8898620_8898625_+ 0.997481712 0.902374618 0.949928165 0.067250875 Sec31 FBtr0088643|FBtr0345224|FBtr0339302|FBtr0088642 8898576|8898576|8898576|8898576 8898798|8898798|8898798|8898798 2R + 8898561 8898654 stop_codon Sec31 FlyBase G14093.1 AGTTGGTTCTGCGTTAGAGCCCCGTCGCCGGATCGCAGCCAAGTTCACTAAACGTATATTCTTATTGTGTCTTCAGATATCGATGTCAAACACA 12 8898604 0.964490998 7 12 66 1 1.176091259 0.333333333 0.25 0.4 12 0 0 15 2R:8898561-8898654 6 Sec31 FBtr0088642|FBtr0339302|FBtr0345224|FBtr0088643 8898576|8898576|8898576|8898576 8898798|8898798|8898798|8898798 TCTTAT 6mer3-8 dme-miR-970-3p 2R + 8898577 8898657 3'utr Sec31 FlyBase G10729.1 GAGCCCCGTCGCCGGATCGCAGCCAAGTTCACTAAACGTATATTCTTATTGTGTCTTCAGATATCGATGTCAAACACAAAA 11 8898619 0.985314224 6 10 84 0.882352941 1.176091259 0.117647059 0.363636364 0.588235294 11 2 0 15 2R:8898577-8898657 6 4.5 1322 FBgn0033339 1910.493333 56.05666667 85.60333333 0.002355413 0.080275911 0.052568046 16 1 8.5 0.2 dme-miR-79-3p 6mer3-8 TAGCTT 2R 8902618 8902623 + 2R_8902618_8902623_+ 0.999979069 0.817191833 0.908585451 0.129250139 Ggamma1 FBtr0088645|FBtr0088647|FBtr0088646 8902559|8902559|8902559 8904791|8903130|8903130 2R + 8902559 8902708 stop_codon Ggamma1 FlyBase G14098.1 AAGGAGGCGGTGAGGATGGTCCGCCGTTGCCGAGGAGTCAGCGATCGCCGGCGGACGTTTAGCTTATTTTTAGTTTAGCAAGATGGATTAGGACGCAAACGTGTGTGGAGTACTACCCCAGTACCAGTATCAACGCCACCTGGAACAATA 38 8902643 0.854266942 17 35 211 0.958333333 1.662757832 0.291666667 0.157894737 0.333333333 38 2 0 46 2R:8902559-8902708 6 Ggamma1 FBtr0088646|FBtr0088647|FBtr0088645 8902559|8902559|8902559 8903130|8903130|8904791 TAGCTT 6mer3-8 dme-miR-79-3p 2R + 8902523 8902685 stop_codon Ggamma1 FlyBase G10733.1 ATCCCTTCCGCGAGAAGTCGTCCTGCACCGTTCTCTAAGGAGGCGGTGAGGATGGTCCGCCGTTGCCGAGGAGTCAGCGATCGCCGGCGGACGTTTAGCTTATTTTTAGTTTAGCAAGATGGATTAGGACGCAAACGTGTGTGGAGTACTACCCCAGTACCAG 23 8902644 0.969230001 14 21 118 0.825 0.740362689 0.225 0.391304348 0.65 23 2 5 33 2R:8902523-8902685 6 7.5 1323 FBgn0004921 4069.183333 548.5766667 837.3966667 0.001843122 0.013671744 0.008956329 -25 -26 -25.5 0.2 dme-miR-1008-3p 6mer3-8 AGCTGT 2R 8917932 8917937 + 2R_8917932_8917937_+ 0.999833553 0.999998458 0.999916005 0.000116602 lin FBtr0088651 8917676 8918234 2R + 8917920 8917962 3'utr lin FlyBase G14118.1 AGATACATACCCAGCTGTATGTAATTGTCATTGTAATTGTAAT 7 8917945 0.987816192 5 6 54 0.888888889 0.602059991 0 0.142857143 0.333333333 7 0 1 8 2R:8917920-8917962 6 lin FBtr0088651 8917676 8918234 AGCTGT 6mer3-8 dme-miR-1008-3p 2R + 8917919 8917970 3'utr lin FlyBase G10750.1 CAGATACATACCCAGCTGTATGTAATTGTCATTGTAATTGTAATGAGCATCA 6 8917944 0.982332006 4 6 47 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 2R:8917919-8917970 6 3.5 1324 FBgn0002552 347.3366667 11.45666667 17.51666667 0.010076679 0.305498982 0.199809705 -13 -12 -12.5 0.2 dme-miR-965-3p 8mer-A1 TACGCTTA 2R 8944614 8944621 - 2R_8944614_8944621_- 0.407121756 0.625281629 0.516201692 0.154262274 CG8230 FBtr0088674 8944296 8944905 2R - 8944603 8944634 3'utr CG8230 FlyBase G21138.1 ACATAGACATAGCTACGCTTATACTAATGTGT 8 8944620 0.681315505 4 8 45 1 0.903089987 0 0 0 8 0 0 8 2R:8944603-8944634 8 CG8230 FBtr0088674 8944296 8944905 TACGCTTA 8mer-A1 dme-miR-965-3p 2R - 8944598 8944634 3'utr CG8230 FlyBase G16024.1 ACATAGACATAGCTACGCTTATACTAATGTGTATGTT 6 8944620 0.740289837 4 6 44 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 2R:8944598-8944634 8 7 1325 FBgn0027607 600.88 26.23666667 40.29 0.011649581 0.266802185 0.173740382 -1 -1 -1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 8948437 8948443 - 2R_8948437_8948443_- 0.685091323 0.685040982 0.685066153 3.56E-05 CG33199 FBtr0307344|FBtr0307344|FBtr0307344|FBtr0088688|FBtr0088688|FBtr0088688 8947679|8947679|8947679|8948111|8948111|8948111 8948752|8948752|8948752|8948752|8948752|8948752 2R - 8948365 8948623 3'utr CG33199 FlyBase G21151.1 TTGCCTAAGTTAAGTCACCCACTCACCACAGACCCAAGCGGAACTCGGACATGGAGGCTTGTTTTGTAATATTCTGTTCGATAAACTAACTGATCGGAGGCGAGGATCTGTGCGCATATATAGATATATTTTCTTGTTTACACATGCACACCATGCGTCGCCAACTAAAAGGAATAAATTTGTGATAAATCGTGTATGAAAAAAGCCCATCGGCAGACAAACTGAACGAAGGAGCGATGGAGGAGAAGATTCGCTGAGC 327 8948445 0.974889446 26 311 1938 0.957178841 1.625541087 0.173803526 0.171253823 0.317380353 327 9 8 380 2R:8948365-8948623 7 CG33199 FBtr0088688|FBtr0088688|FBtr0088688|FBtr0307344|FBtr0307344|FBtr0307344 8948111|8948111|8948111|8947679|8947679|8947679 8948752|8948752|8948752|8948752|8948752|8948752 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 8948357 8948594 3'utr CG33199 FlyBase G16033.1 AGACCCAAGCGGAACTCGGACATGGAGGCTTGTTTTGTAATATTCTGTTCGATAAACTAACTGATCGGAGGCGAGGATCTGTGCGCATATATAGATATATTTTCTTGTTTACACATGCACACCATGCGTCGCCAACTAAAAGGAATAAATTTGTGATAAATCGTGTATGAAAAAAGCCCATCGGCAGACAAACTGAACGAAGGAGCGATGGAGGAGAAGATTCGCTGAGCTTGCGGGA 273 8948445 0.999965586 23 265 1650 0.973614776 2.089905111 0.232189974 0.32967033 0.517150396 273 8 2 369 2R:8948357-8948594 7 228 1326 FBgn0053199 249.6866667 28.21 43.29 0.913144474 8.08224034 5.266805267 2 2 2 0.2 dme-miR-14-3p 8mer-A1 AAGACTGA 2R 8960983 8960990 + 2R_8960983_8960990_+ 0.64237464 0.643218172 0.642796406 0.000596515 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 2R + 8960954 8961011 3'utr babo FlyBase G14181.1 TAACGAAAACAAAACAGTAAGACTATGTCAAGACTGAGCAGCAGTGGAAAGCAGTGAG 85 8960980 0.960788884 6 66 330 0.777777778 1.886490725 0.515151515 0.152941176 0.272727273 85 22 0 77 2R:8960954-8961011 8 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 AAGACTGA 8mer-A1 dme-miR-14-3p 2R + 8960958 8961007 3'utr babo FlyBase G10788.1 GAAAACAAAACAGTAAGACTATGTCAAGACTGAGCAGCAGTGGAAAGCAG 55 8960980 0.898445185 5 41 207 0.7625 1.30820858 0.6375 0.345454545 0.55 55 17 2 61 2R:8960958-8961007 8 64.5 1327 FBgn0011300 981.73 24.67666667 37.73 0.065700345 2.613805214 1.709514975 3 3 3 0.2 dme-miR-305-3p 6mer2-7 TGTGCC 2R 8961243 8961248 + 2R_8961243_8961248_+ 0.915547823 0.945628478 0.93058815 0.021270267 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 2R + 8961181 8961281 3'utr babo FlyBase G14182.1 ACGATTTGGCGCGCCGCCTGCTCACGAACAGCTTGCCATGCCCACGTCGCTATTGCTGCTGCTGTGCCTCTAAAACTTAATGAACACCACCCCTCTCCCAT 38 8961242 0.787956745 14 30 224 0.854166667 1.612783857 0.270833333 0.236842105 0.395833333 38 7 0 41 2R:8961181-8961281 6 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 TGTGCC 6mer2-7 dme-miR-305-3p 2R + 8961145 8961263 3'utr babo FlyBase G10789.1 AAATCGTAACGTAAAAAATAAAATGAAAGGAATCAAACGATTTGGCGCGCCGCCTGCTCACGAACAGCTTGCCATGCCCACGTCGCTATTGCTGCTGCTGTGCCTCTAAAACTTAATGA 25 8961243 0.976870605 12 24 156 0.96875 1.491361694 0.28125 0.28 0.4375 25 1 0 31 2R:8961145-8961263 6 17.5 1328 FBgn0011300 981.73 24.67666667 37.73 0.017825675 0.709171957 0.463821892 1 0 0.5 0.2 dme-miR-277-3p 6mer3-8 TGCATT 2R 8962154 8962159 + 2R_8962154_8962159_+ 0.967878839 0.999997571 0.983938205 0.022711421 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 2R + 8962108 8962178 3'utr babo FlyBase G14188.1 AGGTTTTGAAACTATTCCTGTAATTGTAAAATCTGTAAATAATCTGTGCATTCAGTGCATGCGAGTCAAAC 14 8962158 0.915220831 6 13 111 0.888888889 1.204119983 0.166666667 0.285714286 0.444444444 14 2 0 16 2R:8962108-8962178 6 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 TGCATT 6mer3-8 dme-miR-277-3p 2R + 8962153 8962214 3'utr babo FlyBase G10795.1 GTGCATTCAGTGCATGCGAGTCAAACAAAAAATGAGAGACAAGTTTCGAAGGATAGCGGACT 5 8962178 0.930321195 3 4 19 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 2R:8962153-8962214 6 4 1329 FBgn0011300 981.73 24.67666667 37.73 0.00407444 0.162096447 0.106016433 -4 -24 -14 0.2 dme-miR-14-3p 6mer3-8 AAGACT 2R 8962265 8962270 + 2R_8962265_8962270_+ 0.954473334 0.949929733 0.952201533 0.00321281 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 2R + 8962241 8962287 3'utr babo FlyBase G14189.1 AAGTTTAAGCCGAAAGTTGTTCTTAAGACTAACCCCCAATACAACCT 29 8962263 0.734127703 2 27 174 0.939393939 1.190331698 0.090909091 0.103448276 0.212121212 29 1 1 31 2R:8962241-8962287 6 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 AAGACT 6mer3-8 dme-miR-14-3p 2R + 8962241 8962289 3'utr babo FlyBase G10796.1 AAGTTTAAGCCGAAAGTTGTTCTTAAGACTAACCCCCAATACAACCTCC 13 8962263 0.735021929 2 13 86 1 1.301029996 0.05 0.384615385 0.6 13 0 0 20 2R:8962241-8962289 6 20 1330 FBgn0011300 981.73 24.67666667 37.73 0.0203722 0.810482237 0.530082163 2 2 2 0.2 dme-miR-965-3p 6mer3-8 TACGCT 2R 8969659 8969664 - 2R_8969659_8969664_- 0.999935025 0.999917295 0.99992616 1.25E-05 CG8213 FBtr0339307|FBtr0273385|FBtr0273384 8969344|8969344|8969344 8971208|8970017|8970017 2R - 8969635 8969679 3'utr CG8213 FlyBase G21162.1 AGTCTGAATGAGAATTACGCTGATTGCAAAACGTAGGGATAAGAC 6 8969660 0.974791014 3 4 30 0.875 0.84509804 0.125 0.333333333 0.5 6 1 0 7 2R:8969635-8969679 6 CG8213 FBtr0273384|FBtr0339307|FBtr0273385 8969344|8969344|8969344 8970017|8971208|8970017 TACGCT 6mer3-8 dme-miR-965-3p 2R - 8969635 8969699 3'utr CG8213 FlyBase G16043.1 CGCGTGCCTAACACTTGTAGAGTCTGAATGAGAATTACGCTGATTGCAAAACGTAGGGATAAGAC 8 8969664 0.970780457 6 7 45 0.923076923 1.079181246 0.230769231 0.5 0.692307692 8 1 0 12 2R:8969635-8969699 6 5 1331 FBgn0033359 56 1.02 1.516666667 0.089285714 4.901960784 3.296703297 -4 0 -2 0.2 dme-miR-317-3p 8mer-A1 TGTGTTCA 2R 9097257 9097264 - 2R_9097257_9097264_- 0.615474407 0.61585596 0.615665183 0.000269832 CG8078 FBtr0088631 9096929 9097310 2R - 9097242 9097293 3'utr CG8078 FlyBase G21171.1 ATTTATTCGTGATTCCACAAGATACAAATTGTGTTCATCCAAGGTTGCCAAC 11 9097265 0.790419418 2 11 93 1 1.079181246 0.166666667 0.090909091 0.166666667 11 0 0 12 2R:9097242-9097293 8 CG8078 FBtr0088631 9096929 9097310 TGTGTTCA 8mer-A1 dme-miR-317-3p 2R - 9097240 9097287 3'utr CG8078 FlyBase G16050.1 TCGTGATTCCACAAGATACAAATTGTGTTCATCCAAGGTTGCCAACCT 8 9097265 0.980348838 2 8 60 1 1.079181246 0.166666667 0.25 0.5 8 0 0 12 2R:9097240-9097287 8 9 1332 FBgn0033375 108.7933333 8.903333333 13.57 0.082725657 1.010857357 0.663227708 1 1 1 0.2 dme-miR-1002-5p 6mer3-8 CTACTT 2R 9105448 9105453 + 2R_9105448_9105453_+ 0.971590837 0.911172603 0.94138172 0.042722119 Vang FBtr0088566 9105387 9106796 2R + 9105427 9105480 stop_codon Vang FlyBase G14220.1 TAGCAACCAGACGCAATCGTCCTACTTGCATGTGTTTGTCTGATTTTCCCAGCT 10 9105449 0.965134252 5 10 56 1 1.113943352 0.230769231 0.3 0.461538462 10 0 0 13 2R:9105427-9105480 6 Vang FBtr0088566 9105387 9106796 CTACTT 6mer3-8 dme-miR-1002-5p 2R + 9105401 9105475 stop_codon Vang FlyBase G10814.1 GCCCCTCCAATCAACACTCCCACTCATAGCAACCAGACGCAATCGTCCTACTTGCATGTGTTTGTCTGATTTTCC 13 9105449 0.983290241 8 11 81 0.875 1.146128036 0.0625 0.333333333 0.5 12 2 0 14 2R:9105401-9105475 6 9 1333 FBgn0015838 1538.993333 53.09333333 81.26666667 0.005847979 0.169512808 0.110746514 -1 -1 -1 0.2 dme-miR-33-5p 6mer2-7 AATGCA 2R 9105994 9105999 + 2R_9105994_9105999_+ 0.84248024 0.845163353 0.843821797 0.001897309 Vang FBtr0330624|FBtr0088566 9105468|9105387 9106796|9106796 2R + 9105863 9106011 3'utr Vang FlyBase G14221.3 GTATCATCCTAAACCGACGCGAACATATCACACCCTTTGATAAGCAAACATGACTTACAAGTTCCCAAAGTATTAATTATAAGAATGATGGTTTGGCTTGCCGAACCGCGATCTTCAGATATCAACTCTTAAATGCAGCTCTTTTATAC 125 9105996 0.869110199 27 113 912 0.918367347 1.528273777 0.108843537 0.177419355 0.306122449 124 9 3 135 2R:9105863-9106011 6 Vang FBtr0330624|FBtr0088566 9105468|9105387 9106796|9106796 AATGCA 6mer2-7 dme-miR-33-5p 2R + 9105695 9106021 3'utr Vang FlyBase G10815.1 AAGTTTAGAAAGGAAAAGTTGTTGTGAGAACAAAATGTCTAGGCAGGCCTCAGCAGCTAAATTTTGATCTTGTAACAAATGATTATTAGATGAGAAGGCAACGTACTTATCAGTGCTAAACTTGAACTTATGACCCGAATATCAAGAAACAATGCTCAAAAGCCCAGTGTATCATCCTAAACCGACGCGAACATATCACACCCTTTGATAAGCAAACATGACTTACAAGTTCCCAAAGTATTAATTATAAGAATGATGGTTTGGCTTGCCGAACCGCGATCTTCAGATATCAACTCTTAAATGCAGCTCTTTTATACACGATTTTTA 161 9105996 0.896804901 44 142 1132 0.902542373 1.425289616 0.199152542 0.347826087 0.555084746 161 16 7 213 2R:9105695-9106021 6 69 1334 FBgn0015838 1538.993333 53.09333333 81.26666667 0.044834502 1.299598192 0.849056604 -2 -2 -2 0.2 dme-miR-277-3p 7mer-m8 TGCATTT 2R 9106357 9106363 + 2R_9106357_9106363_+ 0.615691643 0.620183553 0.617937598 0.003176324 Vang FBtr0330624|FBtr0088566 9105468|9105387 9106796|9106796 2R + 9106296 9106373 3'utr Vang FlyBase G14224.1 CAACTATAACTCGAATGCAACTGATGACAAATACATAATATAAGCGAAGACTGCCTGAATATGCATTTTATACACACA 50 9106352 0.767491 11 47 248 0.964912281 1.740362689 0.070175439 0.14 0.245614035 50 2 0 55 2R:9106296-9106373 7 Vang FBtr0330624|FBtr0088566 9105468|9105387 9106796|9106796 TGCATTT 7mer-m8 dme-miR-277-3p 2R + 9106301 9106525 3'utr Vang FlyBase G10818.1 ATAACTCGAATGCAACTGATGACAAATACATAATATAAGCGAAGACTGCCTGAATATGCATTTTATACACACAAATTGCCAACAGCCACTAGCAGGTGTATGTACTAGCCTGTGCATAGCAACCACATATATACAAAAACTCGTGTATTTTTAGAGACAAAATTATAGTGATAAGGACCCGAATTCGTATTCGAACATGTGTACGTTCCAGTGAACCCAATCTAT 93 9106351 0.969636089 28 88 494 0.937931034 2.133538908 0.172413793 0.397849462 0.613793103 93 9 0 136 2R:9106301-9106525 7 16.5 1335 FBgn0015838 1538.993333 53.09333333 81.26666667 0.010721294 0.310773481 0.203035275 5 6 5.5 0.2 dme-miR-190-5p 6mer3-8 ACATAT 2R 9119425 9119430 + 2R_9119425_9119430_+ 0.999024826 0.595193603 0.797109214 0.28555178 Su(var)2-10 FBtr0088576|FBtr0088571|FBtr0088574 9119072|9119072|9119072 9120105|9120105|9119480 2R + 9119395 9119448 5'utr Su(var)2-10 FlyBase G14242.1 ATTGTCCAAAATGAAAATTACATATATGTTACATATGATTCTGACTTCATCATC 7 9119430 0.98713905 6 7 62 1 0.954242509 0 0.142857143 0.333333333 7 0 0 9 2R:9119395-9119448 6 Su(var)2-10 FBtr0088571|FBtr0088574|FBtr0088576 9119072|9119072|9119072 9120105|9119480|9120105 ACATAT 6mer3-8 dme-miR-190-5p 2R + 9119420 9119451 5'utr Su(var)2-10 FlyBase G10838.1 ATGTTACATATGATTCTGACTTCATCATCACT 5 9119442 0.94091494 3 5 38 1 0.84509804 0 0.4 0.571428571 5 0 0 7 2R:9119420-9119451 6 4.5 1336 FBgn0003612 1532.696667 79.66 122.23 0.002936002 0.056490083 0.036815839 -5 -17 -11 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 2R 9119625 9119630 + 2R_9119625_9119630_+ 0.974131593 0.952038139 0.963084866 0.015622464 Su(var)2-10 FBtr0088576|FBtr0088571 9119072|9119072 9120105|9120105 2R + 9119574 9119647 3'utr Su(var)2-10 FlyBase G14244.1 ATGTTTATGTTTCAAAAAAGTGACCAGAAGGGCTATTTATCATGATAATTTTGTGTTAGATCTACGGAGTCCAG 7 9119623 0.986005129 6 7 61 1 0.84509804 0.714285714 0 0 7 0 0 7 2R:9119574-9119647 6 Su(var)2-10 FBtr0088571|FBtr0088576 9119072|9119072 9120105|9120105 TGTGTT 6mer3-8 dme-miR-317-3p 2R + 9119579 9119646 3'utr Su(var)2-10 FlyBase G10840.1 TATGTTTCAAAAAAGTGACCAGAAGGGCTATTTATCATGATAATTTTGTGTTAGATCTACGGAGTCCA 11 9119610 0.968500286 6 10 61 1 1.255272505 0.055555556 0.363636364 0.611111111 11 0 0 18 2R:9119579-9119646 6 3.5 1337 FBgn0003612 1532.696667 79.66 122.23 0.002283557 0.043936731 0.028634541 2 15 8.5 0.2 dme-miR-282-5p 8mer-A1 AGAGGCTA 2R 9120674 9120681 + 2R_9120674_9120681_+ 0.637897711 0.637906214 0.637901962 6.01E-06 Su(var)2-10 FBtr0088577|FBtr0088570|FBtr0088575 9120537|9120537|9120537 9120816|9120816|9120816 2R + 9120631 9120719 3'utr Su(var)2-10 FlyBase G14248.1 TTTTCGGTTTCACTTCCGGTGGCGCACGGCCACATATTACCTTAGAGGCTATTCTTCGGCGTTCGATTCGCCGCCTTGCATCACCTCAT 36 9120673 0.985591309 9 35 289 0.953488372 1.612783857 0.069767442 0.194444444 0.325581395 36 2 0 41 2R:9120631-9120719 8 Su(var)2-10 FBtr0088575|FBtr0088570|FBtr0088577 9120537|9120537|9120537 9120816|9120816|9120816 AGAGGCTA 8mer-A1 dme-miR-282-5p 2R + 9120656 9120695 3'utr Su(var)2-10 FlyBase G10846.1 ACGGCCACATATTACCTTAGAGGCTATTCTTCGGCGTTCG 20 9120673 0.771858149 4 17 148 0.857142857 1.380211242 0.142857143 0.35 0.535714286 20 4 0 24 2R:9120656-9120695 8 25 1338 FBgn0003612 1532.696667 79.66 122.23 0.01631112 0.313833794 0.204532439 1 1 1 0.2 dme-miR-965-3p 6mer3-8 TACGCT 2R 9123400 9123405 - 2R_9123400_9123405_- 0.999525304 0.999396698 0.999461001 9.09E-05 CG18659 FBtr0339371|FBtr0306382|FBtr0339372|FBtr0088626|FBtr0306381|FBtr0302497|FBtr0302498 9123302|9123302|9123302|9123302|9123302|9123302|9123302 9127111|9125499|9123701|9123701|9127111|9123701|9123701 2R - 9123308 9123462 3'utr CG18659 FlyBase G21196.1 TTTAACAATTGCATGAATCGGAACTCTCGCTAACTACGCATACTTACATACATATTGTACGCTGGACTTCCAAATCAAAAGACACAAGAATCTAGAGTAGCATGAATTTAAGCCAATTAGCCTAACAAATTACCAATAAATATAAAATAAATTCC 113 9123396 0.962317556 17 109 561 0.970588235 1.819543936 0.139705882 0.168141593 0.308823529 113 3 1 132 2R:9123308-9123462 6 CG18659 FBtr0339372|FBtr0306382|FBtr0339371|FBtr0302498|FBtr0302497|FBtr0306381|FBtr0088626 9123302|9123302|9123302|9123302|9123302|9123302|9123302 9123701|9125499|9127111|9123701|9123701|9127111|9123701 TACGCT 6mer3-8 dme-miR-965-3p 2R - 9123320 9123459 3'utr CG18659 FlyBase G16073.1 AACAATTGCATGAATCGGAACTCTCGCTAACTACGCATACTTACATACATATTGTACGCTGGACTTCCAAATCAAAAGACACAAGAATCTAGAGTAGCATGAATTTAAGCCAATTAGCCTAACAAATTACCAATAAATAT 87 9123399 0.964967362 16 85 445 0.967479675 1.598425707 0.097560976 0.310344828 0.512195122 87 2 2 119 2R:9123320-9123459 6 77 1339 FBgn0027561 809.6966667 28.81666667 43.97666667 0.095097341 2.672064777 1.750928523 -9 -6 -7.5 0.2 dme-miR-278-3p 7mer-A1 CCACCGA 2R 9124998 9125004 - 2R_9124998_9125004_- 0.72804438 0.813754373 0.770899376 0.060606122 CG18659 FBtr0339371|FBtr0306382|FBtr0306381 9123302|9123302|9123302 9127111|9125499|9127111 2R - 9124877 9125070 5'utr CG18659 FlyBase G21201.1 AGACCGCGTCAGCCCCTGCCTACCGCCGATTCCAGCAGCTTTGATAGTCCGCCGGACGTACAATCTCCACCGATTCCGCCCCGGAGGCAGGGCAGCTCGAATGCGATTGTGGCGGCCACGGCTGCAGCCGTCAGTGCAGAGATTAGCAAACTGGAACGTAACTGCTGGAAGGACGAGCCCGGAAATGATTCTGT 488 9124997 0.895668955 13 487 1430 0.990654206 2.72427587 0.011214953 0.081967213 0.162616822 488 5 0 530 2R:9124877-9125070 7 CG18659 FBtr0306382|FBtr0339371|FBtr0306381 9123302|9123302|9123302 9125499|9127111|9127111 CCACCGA 7mer-A1 dme-miR-278-3p 2R - 9124953 9125011 5'utr CG18659 FlyBase G16081.1 ACAATCTCCACCGATTCCGCCCCGGAGGCAGGGCAGCTCGAATGCGATTGTGGCGGCCA 160 9124997 0.895102274 3 156 462 0.973568282 1.566241023 0.013215859 0.35 0.54185022 160 1 5 221 2R:9124953-9125011 7 314 1340 FBgn0027561 809.6966667 28.81666667 43.97666667 0.387799546 10.89647195 7.14015008 -7 -7 -7 0.2 dme-miR-1008-3p 7mer-A1 GCTGTGA 2R 9125426 9125432 - 2R_9125426_9125432_- 0.788464599 0.78872834 0.788596469 0.000186464 CG18659 FBtr0306382 9123302 9125499 2R - 9125399 9125482 5'utr CG18659 FlyBase G21203.1 AGCCGTTCACATGCTTGCCGCTAAGCTAAATCGACCACTCATCTCGATGTGCTGTGAATTTATGTTGTTCTCATGCTCTTCTTG 165 9125435 0.987219047 8 162 1432 0.989189189 2.26245109 0.064864865 0.109090909 0.205405405 165 2 0 183 2R:9125399-9125482 7 CG18659 FBtr0306382 9123302 9125499 GCTGTGA 7mer-A1 dme-miR-1008-3p 2R - 9125385 9125483 5'utr CG18659 FlyBase G16083.1 CAGCCGTTCACATGCTTGCCGCTAAGCTAAATCGACCACTCATCTCGATGTGCTGTGAATTTATGTTGTTCTCATGCTCTTCTTGTTTTTGTTTCCTTG 142 9125435 0.988007058 9 138 1247 0.977578475 1.736396502 0.058295964 0.457746479 0.65470852 142 2 3 218 2R:9125385-9125483 7 147.5 1341 FBgn0027561 809.6966667 28.81666667 43.97666667 0.182166984 5.118565645 3.354051391 3 3 3 0.2 dme-miR-283-5p 6mer3-8 TGATAT 2R 9135184 9135189 + 2R_9135184_9135189_+ 0.645548925 0.761583786 0.703566356 0.082049065 Hydr1 FBtr0300180|FBtr0339361|FBtr0339360|FBtr0302496|FBtr0088580 9135052|9135052|9135052|9135052|9135052 9135453|9135453|9135453|9135453|9135453 2R + 9135074 9135254 3'utr Hydr1 FlyBase G14265.1 GGTCGGTCGGTCCGCTAGTCTAGTTCAGTTTTTGTCCAGTTGAACACGTAGATATACGAGAATGTTTGTATTCCGATAGATTGCCGTCGGCGAAGACTCTTGTACACATGTGATATGAAACGTTGATCAAAATCCAAAGTGTTGTTATACTTATATACAGCGAACAGGGAACCAAATTATC 55 9135174 0.978282638 20 51 338 0.930555556 1.826074803 0.208333333 0.236363636 0.416666667 55 5 0 67 2R:9135074-9135254 6 Hydr1 FBtr0088580|FBtr0302496|FBtr0339360|FBtr0339361|FBtr0300180 9135052|9135052|9135052|9135052|9135052 9135453|9135453|9135453|9135453|9135453 TGATAT 6mer3-8 dme-miR-283-5p 2R + 9135130 9135221 3'utr Hydr1 FlyBase G10857.1 CGAGAATGTTTGTATTCCGATAGATTGCCGTCGGCGAAGACTCTTGTACACATGTGATATGAAACGTTGATCAAAATCCAAAGTGTTGTTAT 35 9135173 0.928514117 14 33 199 0.942307692 1.389166084 0.173076923 0.314285714 0.538461538 35 2 1 49 2R:9135130-9135221 6 21 1342 FBgn0033382 206.7266667 10.77333333 16.46666667 0.101583411 1.949257426 1.275303644 10 11 10.5 0.2 dme-miR-190-5p 8mer-A1 ACATATCA 2R 9135308 9135315 + 2R_9135308_9135315_+ 0.560074884 0.385557791 0.472816337 0.123402225 Hydr1 FBtr0300180|FBtr0339361|FBtr0339360|FBtr0302496|FBtr0088580 9135052|9135052|9135052|9135052|9135052 9135453|9135453|9135453|9135453|9135453 2R + 9135284 9135320 3'utr Hydr1 FlyBase G14266.1 TACTCTTAGATCGTGACTTTAGTGACATATCAGGTTG 6 9135302 0.820679188 4 6 51 1 0.903089987 0.5 0.333333333 0.5 6 0 0 8 2R:9135284-9135320 8 Hydr1 FBtr0088580|FBtr0302496|FBtr0339360|FBtr0339361|FBtr0300180 9135052|9135052|9135052|9135052|9135052 9135453|9135453|9135453|9135453|9135453 ACATATCA 8mer-A1 dme-miR-190-5p 2R + 9135288 9135338 3'utr Hydr1 FlyBase G10858.1 CTTAGATCGTGACTTTAGTGACATATCAGGTTGAAATTGCAAATAAGCTGT 5 9135302 0.97404207 5 5 28 1 0.903089987 0.125 0.6 0.75 5 0 0 8 2R:9135288-9135338 8 4 1343 FBgn0033382 206.7266667 10.77333333 16.46666667 0.019349221 0.371287129 0.24291498 6 6 6 0.2 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 2R 9162302 9162309 - 2R_9162302_9162309_- 0.617837568 0.621588148 0.619712858 0.002652004 CG8046 FBtr0088621 9162035 9162726 2R - 9162278 9162328 3'utr CG8046 FlyBase G21237.1 ACTTTTGTACACCAACGATTGGTGCTAACTACGGATCTGAGCGAGCGCTAA 36 9162310 0.93375182 6 33 183 0.923076923 1.681241237 0.192307692 0.388888889 0.576923077 36 4 0 48 2R:9162278-9162328 8 CG8046 FBtr0088621 9162035 9162726 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 2R - 9162280 9162326 3'utr CG8046 FlyBase G16109.1 TTTTGTACACCAACGATTGGTGCTAACTACGGATCTGAGCGAGCGCT 31 9162310 0.824973097 7 30 164 0.951219512 1.113943352 0.195121951 0.290322581 0.463414634 31 0 2 39 2R:9162280-9162326 8 32.5 1344 FBgn0033388 91.66666667 5.236666667 8.053333333 0.354545455 6.206238065 4.035596026 1 1 1 0.2 dme-miR-932-5p 7mer-m8 GGAATTG 2R 9162508 9162514 - 2R_9162508_9162514_- 0.494414275 0.649316513 0.571865394 0.109532396 CG8046 FBtr0088620|FBtr0088621 9162424|9162035 9162726|9162726 2R - 9162504 9162537 3'utr CG8046 FlyBase G21240.1 ACAAATCCAAGCGTAGAGTTTGGGGAATTGTGCT 9 9162517 0.671581557 3 8 42 0.916666667 1.041392685 0 0.222222222 0.416666667 9 1 0 11 2R:9162504-9162537 7 CG8046 FBtr0088620|FBtr0088621 9162424|9162035 9162726|9162726 GGAATTG 7mer-m8 dme-miR-932-5p 2R - 9162498 9162534 3'utr CG8046 FlyBase G16111.1 AATCCAAGCGTAGAGTTTGGGGAATTGTGCTTTGCCA 7 9162517 0.918261274 5 7 34 1 1.041392685 0 0.428571429 0.636363636 7 0 0 11 2R:9162498-9162534 7 8 1345 FBgn0033388 91.66666667 5.236666667 8.053333333 0.087272727 1.52768937 0.993377483 3 3 3 0.2 dme-miR-190-5p 6mer3-8 ACATAT 2R 9167792 9167797 - 2R_9167792_9167797_- 0.999963252 0.996067941 0.998015597 0.002754464 Rme-8 FBtr0088618|FBtr0339370 9167761|9167761 9168133|9168133 2R - 9167793 9167820 3'utr Rme-8 FlyBase G21252.1 TAGAGCATGCATAAAGTGATTAAACATA 14 9167811 0.631008551 3 14 61 1 1.255272505 0.111111111 0.142857143 0.333333333 14 0 0 18 2R:9167793-9167820 4 Rme-8 FBtr0339370|FBtr0088618 9167761|9167761 9168133|9168133 ACATAT 6mer3-8 dme-miR-190-5p 2R - 9167791 9167823 3'utr Rme-8 FlyBase G16119.1 AACTAGAGCATGCATAAAGTGATTAAACATATT 13 9167809 0.674595167 3 12 65 0.928571429 1.113943352 0.071428571 0.076923077 0.142857143 13 1 0 13 2R:9167791-9167823 6 12 1346 FBgn0015477 1892.016667 29.22333333 44.74333333 0.006342439 0.410630774 0.268196379 14 12 13 0.2 dme-miR-932-5p 7mer-m8 GGAATTG 2R 9168028 9168034 - 2R_9168028_9168034_- 0.702459739 0.702838195 0.702648967 0.00026764 Rme-8 FBtr0088618|FBtr0339370 9167761|9167761 9168133|9168133 2R - 9167996 9168080 3'utr Rme-8 FlyBase G21254.1 CGCTAGCATGAAGCCTTCGATTGCCACGGAATCAGAAAACGGAAACGGAATTGCACGGGTTGCCCCCAATTATTGTATTAAACTT 20 9168009 0.70927178 8 19 119 0.952380952 1.301029996 0.095238095 0.05 0.095238095 20 1 0 20 2R:9167996-9168080 7 Rme-8 FBtr0339370|FBtr0088618 9167761|9167761 9168133|9168133 GGAATTG 7mer-m8 dme-miR-932-5p 2R - 9167989 9168042 3'utr Rme-8 FlyBase G16121.1 ACGGAAACGGAATTGCACGGGTTGCCCCCAATTATTGTATTAAACTTTATTTTA 8 9168030 0.979701294 5 6 43 0.769230769 1 0.307692308 0.5 0.692307692 8 3 0 10 2R:9167989-9168042 7 8 1347 FBgn0015477 1892.016667 29.22333333 44.74333333 0.004228293 0.27375385 0.178797586 -25 -4 -14.5 0.2 dme-miR-184-3p 6mer2-7 CCGTCC 2R 9178253 9178258 - 2R_9178253_9178258_- 0.849892387 0.91075225 0.880322319 0.043034377 ltd FBtr0346635|FBtr0089932|FBtr0089933|FBtr0339369|FBtr0346636|FBtr0089931|FBtr0089934 9177862|9177862|9177862|9177862|9177862|9177862|9177862 9178433|9178433|9178433|9178433|9178433|9178433|9178433 2R - 9178235 9178282 3'utr ltd FlyBase G21289.1 AGACTTAGTGTCATCCGTATCATCCCGTCCGTCTTTATCTTTAACACC 14 9178260 0.88381296 2 12 133 0.823529412 0.669006781 0.117647059 0.142857143 0.294117647 14 1 2 14 2R:9178235-9178282 6 ltd FBtr0089934|FBtr0346636|FBtr0089931|FBtr0089933|FBtr0339369|FBtr0346635|FBtr0089932 9177862|9177862|9177862|9177862|9177862|9177862|9177862 9178433|9178433|9178433|9178433|9178433|9178433|9178433 CCGTCC 6mer2-7 dme-miR-184-3p 2R - 9178233 9178270 3'utr ltd FlyBase G16143.1 ATCCGTATCATCCCGTCCGTCTTTATCTTTAACACCCC 9 9178260 0.973576267 3 9 59 1 1.176091259 0 0.666666667 0.8 9 0 0 15 2R:9178233-9178270 6 11.5 1348 FBgn0002567 31.33333333 1.753333333 2.75 0.367021277 6.558935361 4.181818182 2 2 2 0.2 dme-miR-276a-3p 7mer-A1 GTTCCTA 2R 9186782 9186788 - 2R_9186782_9186788_- 0.743609402 0.736724658 0.74016703 0.004868218 CG8026 FBtr0302512|FBtr0088611 9186668|9186668 9186974|9188013 2R - 9186694 9186819 3'utr CG8026 FlyBase G21291.1 TGGTCTTTTCGTAGTAAGTAAAGTGATTGTTGTTCCTAAGTGTGGATCAGAATGGATTTGTGATTGAATTCAGACGAAAGTGTTACAATATACCTGTGAAATATAAGTCCATAGCCTCACTCTTGC 121 9186791 0.987379054 21 113 991 0.945205479 1.662757832 0.212328767 0.165289256 0.308219178 121 6 2 138 2R:9186694-9186819 7 CG8026 FBtr0302512|FBtr0088611 9186668|9186668 9186974|9188013 GTTCCTA 7mer-A1 dme-miR-276a-3p 2R - 9186743 9186839 3'utr CG8026 FlyBase G16145.1 AGTTGTTGCGAAGACTTATTTGGTCTTTTCGTAGTAAGTAAAGTGATTGTTGTTCCTAAGTGTGGATCAGAATGGATTTGTGATTGAATTCAGACGA 95 9186791 0.987564343 17 93 827 0.98630137 1.857332496 0.171232877 0.389473684 0.602739726 95 1 1 144 2R:9186743-9186839 7 58.5 1349 FBgn0033391 992.26 57.94 89.16 0.058956322 1.009665171 0.656123822 3 3 3 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2R 9187765 9187770 - 2R_9187765_9187770_- 0.689557894 0.698075798 0.693816846 0.006023065 CG8026 FBtr0088611|FBtr0088611|FBtr0088611|FBtr0302511|FBtr0302511|FBtr0302511 9186668|9186668|9186668|9187361|9187361|9187361 9188013|9188013|9188013|9188013|9188013|9188013 2R - 9187750 9187807 3'utr CG8026 FlyBase G21297.1 TTGTACATCCTTCACTCCCAACTTCGAAAGTAACTGATGTGATCGGGGCGTCGTCAAA 306 9187773 0.790896844 9 289 1571 0.947674419 1.66811956 0.316860465 0.114379085 0.212209302 306 12 6 326 2R:9187750-9187807 6 CG8026 FBtr0302511|FBtr0302511|FBtr0302511|FBtr0088611|FBtr0088611|FBtr0088611 9187361|9187361|9187361|9186668|9186668|9186668 9188013|9188013|9188013|9188013|9188013|9188013 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 9187752 9187808 3'utr CG8026 FlyBase G16151.2 ATTGTACATCCTTCACTCCCAACTTCGAAAGTAACTGATGTGATCGGGGCGTCGTCA 213 9187773 0.771512385 11 196 1074 0.905198777 1.693140461 0.244648318 0.38028169 0.596330275 213 26 5 296 2R:9187752-9187808 6 252.5 1350 FBgn0033391 992.26 57.94 89.16 0.254469595 4.357956507 2.831987438 3 3 3 0.2 dme-miR-980-3p 7mer-A1 GCAGCTA 2R 9187911 9187917 - 2R_9187911_9187917_- 0.808937292 0.808633938 0.808785615 0.000214536 CG8026 FBtr0088611|FBtr0302511 9186668|9187361 9188013|9188013 2R - 9187817 9188049 stop_codon CG8026 FlyBase G21298.1 ATGGTCATGCTGATCTGGGAGAAGCTGACCAGCTAGATGGAGTATTAGTACTAGATCATCGAATCTGGAATCTGACAGAGAATTTAAGCTAAGCACCTAGAATACACGAATCTTTCTCGTTTCCTCCGATGTGCAGCTAACAGCAGAAAATGACAAACTTATTCTGTATTATTGTTGTAACTCGATTTCGGTTTAGCCCTAGCACCTTACTTTAGCCTTAAGTGTATTCCATA 545 9187920 0.977715505 36 530 3511 0.974151858 2.303196057 0.248788368 0.111926606 0.2180937 545 14 2 603 2R:9187817-9188049 7 CG8026 FBtr0302511|FBtr0088611 9187361|9186668 9188013|9188013 GCAGCTA 7mer-A1 dme-miR-980-3p 2R - 9187826 9188028 stop_codon CG8026 FlyBase G16152.1 AAGCTGACCAGCTAGATGGAGTATTAGTACTAGATCATCGAATCTGGAATCTGACAGAGAATTTAAGCTAAGCACCTAGAATACACGAATCTTTCTCGTTTCCTCCGATGTGCAGCTAACAGCAGAAAATGACAAACTTATTCTGTATTATTGTTGTAACTCGATTTCGGTTTAGCCCTAGCACCTTACTTTAGCCTTAAGTG 389 9187920 0.841531504 25 382 2529 0.98791019 2.280274774 0.27806563 0.375321337 0.580310881 389 5 2 572 2R:9187826-9188028 7 411.5 1351 FBgn0033391 992.26 57.94 89.16 0.414709854 7.102174663 4.61529834 3 3 3 0.2 dme-miR-317-3p 8mer-A1 TGTGTTCA 2R 9204658 9204665 - 2R_9204658_9204665_- 0.630150129 0.629874946 0.630012538 0.000194596 CG8027 FBtr0088609 9204408 9204905 2R - 9204639 9204689 3'utr CG8027 FlyBase G21307.1 CCAGCTTTTGCAGTCGACCTGTTTTGTGTTCAGTTTCATAATATCTAAGTT 59 9204666 0.718233928 9 57 685 0.955223881 1.329058719 0.343283582 0.101694915 0.208955224 59 1 2 64 2R:9204639-9204689 8 CG8027 FBtr0088609 9204408 9204905 TGTGTTCA 8mer-A1 dme-miR-317-3p 2R - 9204640 9204685 3'utr CG8027 FlyBase G16159.1 CTTTTGCAGTCGACCTGTTTTGTGTTCAGTTTCATAATATCTAAGT 47 9204666 0.722405198 6 45 523 0.961538462 1.875061263 0.371794872 0.425531915 0.653846154 47 3 0 75 2R:9204640-9204685 8 52 1352 FBgn0033392 84.66666667 3.863333333 5.83 0.614173228 13.45987921 8.919382504 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 9204863 9204869 - 2R_9204863_9204869_- 0.770260238 0.765321984 0.767791111 0.003491835 CG8027 FBtr0088609|FBtr0088609|FBtr0088609 9204408|9204408|9204408 9204905|9204905|9204905 2R - 9204764 9204943 stop_codon CG8027 FlyBase G21308.1 AGGCGAAGCTGGTGAGGCGCTGTGTGCAGCGCTTGTAGGATCGATTTCGTGAAGTTCTCTCCCTTCTGCAATGTTGTGATATGTTGTGAACATTTATGTAAATTGGCCATTTCTGCAAGCGATCATAGTCAAATCTAGTTGTAGGCCATGTGTAAGGCTATTTTTCTAGTTCTTTAGGTG 57 9204871 0.841418001 22 54 535 0.945945946 1.367976785 0.135135135 0.228070175 0.405405405 57 2 2 70 2R:9204764-9204943 7 CG8027 FBtr0088609|FBtr0088609|FBtr0088609 9204408|9204408|9204408 9204905|9204905|9204905 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 9204850 9204895 3'utr CG8027 FlyBase G16162.1 GTGAAGTTCTCTCCCTTCTGCAATGTTGTGATATGTTGTGAACATT 26 9204871 0.724780626 9 25 265 0.971428571 1.531478917 0.314285714 0.269230769 0.457142857 26 1 0 34 2R:9204850-9204895 7 24 1353 FBgn0033392 84.66666667 3.863333333 5.83 0.283464567 6.212251941 4.116638079 2 2 2 0.2 dme-miR-33-5p 6mer3-8 CAATGC 2R 9209144 9209149 + 2R_9209144_9209149_+ 0.989740392 0.998063188 0.99390179 0.005885108 VhaAC45 FBtr0088588|FBtr0088587 9209104|9209104 9209655|9209774 2R + 9209115 9209163 3'utr VhaAC45 FlyBase G14308.1 ATCATCGGTTCACACCTTATTTGATTGTTCAATGCGCACTCAATATTCA 21 9209135 0.733172323 6 20 189 0.958333333 1.06069784 0.125 0.142857143 0.25 21 0 1 23 2R:9209115-9209163 6 VhaAC45 FBtr0088587|FBtr0088588 9209104|9209104 9209774|9209655 CAATGC 6mer3-8 dme-miR-33-5p 2R + 9209117 9209166 3'utr VhaAC45 FlyBase G10888.1 CATCGGTTCACACCTTATTTGATTGTTCAATGCGCACTCAATATTCATTC 17 9209135 0.680947875 8 14 152 0.727272727 1.204119983 0 0.176470588 0.363636364 17 6 0 16 2R:9209117-9209166 6 16 1354 FBgn0262515 1434.51 91.37 139.18 0.011153634 0.175112181 0.114959046 9 9 9 0.2 dme-miR-92b-3p 6mer3-8 GTGCAA 2R 9209596 9209601 + 2R_9209596_9209601_+ 0.999963022 0.983799385 0.991881203 0.011429391 VhaAC45 FBtr0088588|FBtr0088587 9209104|9209104 9209655|9209774 2R + 9209465 9209621 3'utr VhaAC45 FlyBase G14311.1 GAGCGCGCGCGTGTGTGTGTGTGCACATGGGCAGTAAATCTAATCCGAAGTATATCTAAGTGTTTTATAGTTTCTTGTTTGGCGCAAATATGCGAGACTAATTTATGCCTCTGTATGATAGTTTGTCATTTGTGCAACCCTCCTGTTGTTCGCAGGC 20 9209609 0.985963598 14 17 148 0.92 1.361727836 0.36 0.2 0.36 20 2 0 23 2R:9209465-9209621 6 VhaAC45 FBtr0088587|FBtr0088588 9209104|9209104 9209774|9209655 GTGCAA 6mer3-8 dme-miR-92b-3p 2R + 9209569 9209614 3'utr VhaAC45 FlyBase G10891.1 ATGCCTCTGTATGATAGTTTGTCATTTGTGCAACCCTCCTGTTGTT 7 9209609 0.966486979 4 6 59 0.875 0.84509804 0.125 0.142857143 0.25 7 1 0 7 2R:9209569-9209614 6 5.5 1355 FBgn0262515 1434.51 91.37 139.18 0.003834062 0.060194812 0.039517172 -13 -13 -13 0.2 dme-miR-33-5p 7mer-m8 CAATGCA 2R 9252851 9252857 - 2R_9252851_9252857_- 0.674440777 0.659731749 0.667086263 0.010400904 Pkn FBtr0302604|FBtr0088603|FBtr0301511|FBtr0112897|FBtr0088604|FBtr0088605|FBtr0088601 9252308|9252308|9252308|9252308|9252308|9252308|9252308 9254063|9254063|9254063|9254063|9254063|9254063|9254063 2R - 9252786 9252890 3'utr Pkn FlyBase G21313.1 TGCACACCTCATGCGAATCGAAACGAGTATAAACAATGCAGATCTTCTATTGTCATTTTTATTATGATTATGCTCACAACTTGCGGCTATAATCATCGATTTAAT 21 9252844 0.927473004 10 18 153 0.92 1.06069784 0.28 0.19047619 0.32 21 1 1 23 2R:9252786-9252890 7 Pkn FBtr0112897|FBtr0301511|FBtr0088603|FBtr0302604|FBtr0088605|FBtr0088604|FBtr0088601 9252308|9252308|9252308|9252308|9252308|9252308|9252308 9254063|9254063|9254063|9254063|9254063|9254063|9254063 CAATGCA 7mer-m8 dme-miR-33-5p 2R - 9252830 9252901 3'utr Pkn FlyBase G16164.1 GATAACGATTTTGCACACCTCATGCGAATCGAAACGAGTATAAACAATGCAGATCTTCTATTGTCATTTTTA 21 9252846 0.910310884 7 19 145 0.933333333 1.146128036 0.233333333 0.333333333 0.533333333 21 1 1 28 2R:9252830-9252901 7 13 1356 FBgn0020621 844.8 19.37333333 29.6 0.015388258 0.671025465 0.439189189 -13 -11 -12 0.2 dme-miR-2b-2-5p 6mer2-7 TGAAGA 2R 9288665 9288670 + 2R_9288665_9288670_+ 0.996959529 0.909543592 0.953251561 0.061812376 CG1968 FBtr0088596 9287961 9289026 2R + 9288631 9288692 3'utr CG1968 FlyBase G14320.1 CAGAGCAATCAATCTAAAATAGAAACAAACCTGCTGAAGATCTTCATGTCCAAGATGGACGC 16 9288677 0.975950883 6 13 82 0.909090909 1.301029996 0.272727273 0.25 0.454545455 16 2 0 20 2R:9288631-9288692 6 CG1968 FBtr0088596 9287961 9289026 TGAAGA 6mer2-7 dme-miR-2b-2-5p 2R + 9288657 9288712 3'utr CG1968 FlyBase G10898.1 AAACCTGCTGAAGATCTTCATGTCCAAGATGGACGCCTTTCTGGAACTACCCGATG 12 9288676 0.976448332 6 11 73 1 1.204119983 0.4375 0.333333333 0.5 12 0 0 16 2R:9288657-9288712 6 11.5 1357 FBgn0033401 141.2733333 8.553333333 13.19 0.081402482 1.344505066 0.871872631 -12 -11 -11.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 9303235 9303240 - 2R_9303235_9303240_- 0.474544571 0.876130523 0.675337547 0.283964113 Myd88 FBtr0333000|FBtr0333000|FBtr0333000 9302821|9302821|9302821 9303893|9303893|9303893 2R - 9303192 9303324 3'utr Myd88 FlyBase G21341.1 AAACTGTTTGTTCTCGGTACCGCCATCGGCTGGTTGCCTCATGTGATTAGCTCTAGCCTAGCTGTTACCGATTGTTACTGATTGCTGTGAATGCGTGCCCATATGCCTGATGTGCACCTAAGCACACTCACTT 36 9303243 0.981150772 15 36 278 1 1.672097858 0.404255319 0.277777778 0.446808511 36 0 0 47 2R:9303192-9303324 6 Myd88 FBtr0333000|FBtr0333000|FBtr0333000 9302821|9302821|9302821 9303893|9303893|9303893 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 9303196 9303298 3'utr Myd88 FlyBase G16183.1 CGGCTGGTTGCCTCATGTGATTAGCTCTAGCCTAGCTGTTACCGATTGTTACTGATTGCTGTGAATGCGTGCCCATATGCCTGATGTGCACCTAAGCACACTC 27 9303242 0.982483805 10 27 205 1 1.579783597 0.421052632 0.296296296 0.5 27 0 0 38 2R:9303196-9303298 6 14.5 1358 FBgn0033402 1078.95 50.21333333 77.45 0.013438992 0.288767924 0.18721756 3 2 2.5 0.2 dme-miR-317-5p 6mer2-7 TATCCC 2R 9396395 9396400 - 2R_9396395_9396400_- 0.716365431 0.818813624 0.767589527 0.072441817 Non1 FBtr0300649|FBtr0088554 9396263|9396358 9396478|9396478 2R - 9396386 9396421 3'utr Non1 FlyBase G21351.1 TATAAACTAAGCGTCTATCTTTATCCCTGAAAAACA 22 9396401 0.948088057 6 21 158 0.958333333 1.361727836 0.041666667 0.090909091 0.166666667 22 1 0 23 2R:9396386-9396421 6 Non1 FBtr0300649|FBtr0088554 9396263|9396358 9396478|9396478 TATCCC 6mer2-7 dme-miR-317-5p 2R - 9396384 9396413 3'utr Non1 FlyBase G16192.1 AAGCGTCTATCTTTATCCCTGAAAAACATT 25 9396401 0.623016815 5 24 175 1 1.612783857 0.170731707 0.4 0.634146341 25 0 0 41 2R:9396384-9396413 6 23 1359 FBgn0028473 3601.33 199.31 303.37 0.006386529 0.115398124 0.075815011 1 1 1 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2R 9396443 9396448 - 2R_9396443_9396448_- 0.995204298 0.999517188 0.997360743 0.003049681 Non1 FBtr0300649|FBtr0088554 9396263|9396358 9396478|9396478 2R - 9396446 9396537 stop_codon Non1 FlyBase G21352.1 AGATGCCGAAGCATTTGTTCTCCGGCAAGCGTGGAAATGGCAAGACGGATCGCCGTTAAGCGCCGCAGCCTTGGCTGGTTAAGTGATTCTAC 31 9396459 0.855264097 10 30 193 0.970588235 1.217483944 0.117647059 0.096774194 0.176470588 31 0 1 33 2R:9396446-9396537 2 Non1 FBtr0300649|FBtr0088554 9396263|9396358 9396478|9396478 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2R - 9396446 9396479 stop_codon Non1 FlyBase G16193.1 AGCGCCGCAGCCTTGGCTGGTTAAGTGATTCTAC 19 9396459 0.939739857 4 15 127 0.826086957 0.67669361 0.173913043 0.157894737 0.304347826 19 1 3 19 2R:9396446-9396479 2 16 1360 FBgn0028473 3601.33 199.31 303.37 0.004442803 0.080276955 0.052740877 11 11 11 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 9425649 9425655 + 2R_9425649_9425655_+ 0.656992548 0.592599102 0.624795825 0.04553301 prel FBtr0300293|FBtr0333003 9425641|9425641 9426107|9426107 2R + 9425603 9425689 stop_codon prel FlyBase G14324.1 TGCCTCCAAGATTGCGCAACTGTTTTCTGTCAAGAACTGAGGAACTTCTAGTCTGTACTTTTTGGAATAGATGTCGAATGGGACCGA 33 9425648 0.978537448 9 33 227 1 1.579783597 0 0.121212121 0.236842105 33 0 0 38 2R:9425603-9425689 7 prel FBtr0300293|FBtr0333003 9425641|9425641 9426107|9426107 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 9425596 9425675 stop_codon prel FlyBase G10903.1 AGAGTCATGCCTCCAAGATTGCGCAACTGTTTTCTGTCAAGAACTGAGGAACTTCTAGTCTGTACTTTTTGGAATAGATG 21 9425648 0.982486341 10 20 145 0.96969697 1.505149978 0.363636364 0.428571429 0.636363636 21 1 0 32 2R:9425596-9425675 7 22.5 1361 FBgn0033413 247.3533333 19.64666667 30.09333333 0.090962995 1.14523244 0.747673903 1 1 1 0.2 dme-miR-12-5p 6mer2-7 ATACTC 2R 9433770 9433775 + 2R_9433770_9433775_+ 0.999867464 0.990870322 0.995368893 0.006361981 Pdk FBtr0306807 9433272 9433952 2R + 9433750 9433863 3'utr Pdk FlyBase G14340.1 TATATACACGACAAACATTTATACTCTGAAGTAAACTGATGTTTTGAAACATTTACGAAATTAGCTTTAATTTGTGGATTTTAATTAGGCTAAAGCCCGAACTGCATGCAATGT 27 9433769 0.972947757 13 27 167 1 1.531478917 0.235294118 0.259259259 0.411764706 27 0 0 34 2R:9433750-9433863 6 Pdk FBtr0306807 9433272 9433952 ATACTC 6mer2-7 dme-miR-12-5p 2R + 9433746 9433782 3'utr Pdk FlyBase G10917.1 AACCTATATACACGACAAACATTTATACTCTGAAGTA 5 9433769 0.963316101 4 4 22 1 0.77815125 0.666666667 0.2 0.333333333 5 0 0 6 2R:9433746-9433782 6 7 1362 FBgn0017558 322.33 15.26666667 23.27333333 0.021716874 0.458515284 0.300773417 1 1 1 0.2 dme-miR-1003-3p 8mer-A1 ATGTGAGA 2R 9434853 9434860 - 2R_9434853_9434860_- 0.640883493 0.640610753 0.640747123 0.000192828 ced-6 FBtr0306808|FBtr0088549|FBtr0088548|FBtr0088550|FBtr0339384 9434667|9434667|9434667|9434667|9434667 9435274|9435274|9435274|9435274|9435274 2R - 9434684 9434998 3'utr ced-6 FlyBase G21372.1 AGAAACAACCGCAATGCACCTTGTTTAAACGTATCAATTTGTTGCTGTAGTTGAATAGATTAATTGATGGTCGAGTAAAGCGAATGAAAAAATGTTAACAAGTGATAAATGTGAAAATTGCTAAACAATGCTAACTGAATGTGAGAATTTTGTATAAAATAATTATAAAGACATAACCAGAAGCAAATGAATCGATTACTGTATAGAGCCGAAATACGAGGAGAATTAAAGCAAAATGAACAATATTTAATGTTATTGATGCAATATAGAGAAATATTATTATTACTATTATTATTGTGTACGTAAAGAATAAAA 201 9434864 0.976622056 49 190 1321 0.948207171 2.376576957 0.151394422 0.208955224 0.366533865 201 13 0 238 2R:9434684-9434998 8 ced-6 FBtr0339384|FBtr0088550|FBtr0088548|FBtr0088549|FBtr0306808 9434667|9434667|9434667|9434667|9434667 9435274|9435274|9435274|9435274|9435274 ATGTGAGA 8mer-A1 dme-miR-1003-3p 2R - 9434718 9435033 3'utr ced-6 FlyBase G16210.1 TGATAATAATCTGAGGTCAAGATCAAAAGAACACAAGAAACAACCGCAATGCACCTTGTTTAAACGTATCAATTTGTTGCTGTAGTTGAATAGATTAATTGATGGTCGAGTAAAGCGAATGAAAAAATGTTAACAAGTGATAAATGTGAAAATTGCTAAACAATGCTAACTGAATGTGAGAATTTTGTATAAAATAATTATAAAGACATAACCAGAAGCAAATGAATCGATTACTGTATAGAGCCGAAATACGAGGAGAATTAAAGCAAAATGAACAATATTTAATGTTATTGATGCAATATAGAGAAATATTATT 155 9434869 0.977406578 47 140 923 0.916317992 1.86332286 0.209205021 0.393548387 0.606694561 155 18 2 219 2R:9434718-9435033 8 67.5 1363 FBgn0029092 3414.266667 169.59 258.2733333 0.019769985 0.398018751 0.261351023 4 9 6.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 9478158 9478164 + 2R_9478158_9478164_+ 0.627245193 0.574656354 0.600950773 0.037185897 Camta FBtr0339381 9477617 9480076 2R + 9478117 9478210 3'utr Camta FlyBase G14347.1 ATAGTTACATTTGTATATAGATATTGCCTAACTAACTAAATTCTAGTCTATTTTAACGTACTACCAAGCTCTGCGATGCGACTAAGCTTGTCTC 52 9478157 0.986191193 11 51 435 0.984848485 1.812913357 0.03030303 0.211538462 0.378787879 52 1 0 65 2R:9478117-9478210 7 Camta FBtr0339381 9477617 9480076 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 9478144 9478199 3'utr Camta FlyBase G10923.1 CTAACTAACTAAATTCTAGTCTATTTTAACGTACTACCAAGCTCTGCGATGCGACT 35 9478157 0.877909453 4 35 240 1 1.707570176 0.019607843 0.314285714 0.529411765 35 0 0 51 2R:9478144-9478199 7 31 1364 FBgn0259234 576.11 9.96 15.38666667 0.053809168 3.112449799 2.014731369 1 1 1 0.2 dme-miR-184-3p 8mer-A1 TCCGTCCA 2R 9478755 9478762 + 2R_9478755_9478762_+ 0.630727964 0.631092147 0.630910056 0.000257458 Camta FBtr0339381 9477617 9480076 2R + 9478746 9478789 3'utr Camta FlyBase G14349.1 TTATTTTTGTCCGTCCACATTGTTAGCTTTCATAACATACCAAC 6 9478751 0.990542169 4 4 50 0.875 0.84509804 0.25 0.166666667 0.375 6 1 0 7 2R:9478746-9478789 8 Camta FBtr0339381 9477617 9480076 TCCGTCCA 8mer-A1 dme-miR-184-3p 2R + 9478743 9478780 3'utr Camta FlyBase G10924.1 AAATTATTTTTGTCCGTCCACATTGTTAGCTTTCATAA 6 9478751 0.670195448 4 5 63 1 1 0.2 0.5 0.7 6 0 0 10 2R:9478743-9478780 8 5 1365 FBgn0259234 576.11 9.96 15.38666667 0.008678898 0.502008032 0.324956672 4 4 4 0.2 dme-miR-932-5p 7mer-A1 GAATTGA 2R 9566490 9566496 - 2R_9566490_9566496_- 0.416021275 0.400309571 0.408165423 0.01110985 Not1 FBtr0304957 9566144 9567977 2R - 9566272 9566682 3'utr Not1 FlyBase G21396.2 TCGAATCTAAATTCATTATCCTACGTTAGGCAATTTGCGAGTTATGTATGTACATGTACGTGTTATTCAGTCCCTCATTCACTCGACACTCAGCAGCCTGCAGCAAAGCAACTCTATTAGTTTTTAGTCTACCGCAAATGAACATTCATTGTATTTACGCAAGTCAAATCTATTTTGAATTAAACTGAATTGAAGCCTGAAGCCGAGCAAAGTGCACATGTAGAAAGCGAGAGAGAGGAGAGTAGAGAGTAGATGATGGAAGAAGGGCTAGCTTTTTAGCCAAAGGCCCAACTCATTTATAGACTAATTCCGTTTGCAATGGCTAAGAAGTATGTATATGATGGATGTACAGACATTCGTTCACCGATCGACCGACACATTCATAAACGAAAGCTGCGACACAAGAAACCA 316 9566493 0.958071144 54 295 1586 0.931232092 2.034762106 0.140401146 0.091772152 0.17765043 316 22 2 325 2R:9566272-9566682 7 Not1 FBtr0304957 9566144 9567977 GAATTGA 7mer-A1 dme-miR-932-5p 2R - 9566410 9566513 3'utr Not1 FlyBase G16233.1 CTATTTTGAATTAAACTGAATTGAAGCCTGAAGCCGAGCAAAGTGCACATGTAGAAAGCGAGAGAGAGGAGAGTAGAGAGTAGATGATGGAAGAAGGGCTAGCT 110 9566493 0.742294772 10 104 419 0.961538462 1.698970004 0.205128205 0.336363636 0.532051282 110 4 2 150 2R:9566410-9566513 7 115.5 1366 FBgn0085436 10306.14667 124.2833333 191.6566667 0.011206904 0.929328148 0.602640138 -3 -3 -3 0.2 dme-bantam-3p 6mer3-8 TGATCT 2R 9567052 9567057 - 2R_9567052_9567057_- 0.993336174 0.996094837 0.994715505 0.001950625 Not1 FBtr0304957 9566144 9567977 2R - 9566889 9567095 3'utr Not1 FlyBase G21398.1 AGCAGCCACTGCAACATTAACCAGAACCAACCAATGTTTGATCTTCTTATACGCAATATAAGCGATACGTTTTGTTTTAACCTACATTATTTTATGAACTGATTATTAACTGAAATGGAAATACATTGAACACATCTAGCTTGTTAAACGTATAATCGATCCTCCATGTAAAGATAAACGCTGTTAGAATCAGATAGATGAGTGAAT 152 9567049 0.875676875 42 137 1205 0.90052356 1.457377197 0.120418848 0.230263158 0.387434555 152 14 5 172 2R:9566889-9567095 6 Not1 FBtr0304957 9566144 9567977 TGATCT 6mer3-8 dme-bantam-3p 2R - 9567018 9567092 3'utr Not1 FlyBase G16239.1 AGCCACTGCAACATTAACCAGAACCAACCAATGTTTGATCTTCTTATACGCAATATAAGCGATACGTTTTGTTTT 56 9567058 0.934499158 12 54 454 0.9625 1.886490725 0.0625 0.267857143 0.4875 56 3 0 77 2R:9567018-9567092 6 54 1367 FBgn0085436 10306.14667 124.2833333 191.6566667 0.005239592 0.434491082 0.281753831 -8 1 -3.5 0.2 dme-miR-2a-2-5p 7mer-m1 GATGAGG 2R 9567289 9567295 - 2R_9567289_9567295_- 0.825526681 0.825477481 0.825502081 3.48E-05 Not1 FBtr0304957 9566144 9567977 2R - 9567239 9567348 3'utr Not1 FlyBase G21400.1 CAAACCTACTCTCAACGCCGCTGAGAGCGATATTTATAGACGGTGAGCATGAGGATGAGGAGAGGAGGAGAAGGAGAAGCCGAGCAGAATGTTGAAAAGATCCTCAAGTC 18 9567313 0.934861369 11 18 65 1 1.278753601 0.473684211 0.055555556 0.105263158 18 0 0 19 2R:9567239-9567348 7 Not1 FBtr0304957 9566144 9567977 GATGAGG 7mer-m1 dme-miR-2a-2-5p 2R - 9567275 9567313 3'utr Not1 FlyBase G16240.1 ATAGACGGTGAGCATGAGGATGAGGAGAGGAGGAGAAGG 5 9567299 0.868858911 3 4 11 0.7 0.84509804 0 0.6 0.8 5 3 0 7 2R:9567275-9567313 7 6 1368 FBgn0085436 10306.14667 124.2833333 191.6566667 0.000582177 0.048276787 0.031305981 18 4 11 0.2 dme-miR-980-3p 6mer3-8 GGCAGC 2R 9567902 9567907 - 2R_9567902_9567907_- 0.978348165 0.98137927 0.979863718 0.002143311 Not1 FBtr0339394|FBtr0112672|FBtr0112673|FBtr0112674|FBtr0304957 9567512|9567512|9567512|9567512|9566144 9567977|9567977|9567977|9567977|9567977 2R - 9567892 9567930 3'utr Not1 FlyBase G21404.1 CAGACGCAGGCAGTAGCTGCCTGGGCAGCACACCACCAC 11 9567912 0.799303279 3 11 22 1 1.079181246 0.416666667 0.090909091 0.166666667 11 0 0 12 2R:9567892-9567930 6 Not1 FBtr0112672|FBtr0112673|FBtr0112674|FBtr0304957|FBtr0339394 9567512|9567512|9567512|9566144|9567512 9567977|9567977|9567977|9567977|9567977 GGCAGC 6mer3-8 dme-miR-980-3p 2R - 9567901 9567931 3'utr Not1 FlyBase G16244.1 CCAGACGCAGGCAGTAGCTGCCTGGGCAGCA 6 9567910 0.7967343 2 6 12 1 0.954242509 0.111111111 0.333333333 0.555555556 6 0 0 9 2R:9567901-9567931 6 8.5 1369 FBgn0085436 10306.14667 124.2833333 191.6566667 0.000824751 0.068392115 0.04435014 5 3 4 0.2 dme-miR-12-5p 6mer2-7 ATACTC 2R 9592424 9592429 + 2R_9592424_9592429_+ 0.995038184 0.999692665 0.997365424 0.003291229 Map60 FBtr0088530 9592414 9592744 2R + 9592373 9592472 stop_codon Map60 FlyBase G14377.1 GCGCGCCATCCTCGATGTGCAGAGCGACGAACTGGAGCAGTAGACCGACTGATACTCGCAATTTAAATGATTACTCAGCTTACTTATTAGACAAACTAAA 199 9592440 0.729808618 12 188 1148 0.946280992 1.757775491 0.02892562 0.201005025 0.342975207 199 10 3 229 2R:9592373-9592472 6 Map60 FBtr0088530 9592414 9592744 ATACTC 6mer2-7 dme-miR-12-5p 2R + 9592358 9592470 stop_codon Map60 FlyBase G10943.1 GGAGCTGTCCATCTTGCGCGCCATCCTCGATGTGCAGAGCGACGAACTGGAGCAGTAGACCGACTGATACTCGCAATTTAAATGATTACTCAGCTTACTTATTAGACAAACTA 124 9592423 0.970740122 15 117 674 0.956043956 1.763427994 0.098901099 0.338709677 0.549450549 124 6 2 174 2R:9592358-9592470 6 107.5 1370 FBgn0010342 1158.76 77.84 119.11 0.092771583 1.381038027 0.902527076 -16 1 -7.5 0.2 dme-miR-305-3p 7mer-m1 TGTGCCG 2R 9592554 9592560 + 2R_9592554_9592560_+ 0.823830457 0.825441104 0.824635781 0.001138866 Map60 FBtr0088530 9592414 9592744 2R + 9592516 9592575 3'utr Map60 FlyBase G14378.1 TATCGTATTATTTTTTCCGTGTTCAAACGTCTGCGTTCTGTGCCGCCCACTTGTAAAATG 59 9592556 0.982674582 8 55 412 0.924242424 1.183269844 0.333333333 0.084745763 0.181818182 59 2 3 61 2R:9592516-9592575 7 Map60 FBtr0088530 9592414 9592744 TGTGCCG 7mer-m1 dme-miR-305-3p 2R + 9592528 9592579 3'utr Map60 FlyBase G10944.1 TTTTCCGTGTTCAAACGTCTGCGTTCTGTGCCGCCCACTTGTAAAATGTATT 56 9592555 0.783456265 9 50 383 0.840909091 1.392110465 0.238636364 0.392857143 0.613636364 56 12 2 74 2R:9592528-9592579 7 55 1371 FBgn0010342 1158.76 77.84 119.11 0.047464531 0.706577595 0.461758039 -2 -1 -1.5 0.2 dme-miR-317-3p 7mer-A1 GTGTTCA 2R 9592600 9592606 + 2R_9592600_9592606_+ 0.816081234 0.823044542 0.819562888 0.004923797 Map60 FBtr0088530 9592414 9592744 2R + 9592586 9592621 3'utr Map60 FlyBase G14379.1 CAGTTCTGGTATGAGTGTTCATAGCATTTACGCATG 12 9592597 0.805680015 3 12 103 1 1.113943352 0.307692308 0.083333333 0.153846154 12 0 0 13 2R:9592586-9592621 7 Map60 FBtr0088530 9592414 9592744 GTGTTCA 7mer-A1 dme-miR-317-3p 2R + 9592585 9592619 3'utr Map60 FlyBase G10945.1 ACAGTTCTGGTATGAGTGTTCATAGCATTTACGCA 6 9592596 0.714644962 3 4 42 0.6 0.954242509 0.133333333 1 1 6 6 0 9 2R:9592585-9592619 7 8.5 1372 FBgn0010342 1158.76 77.84 119.11 0.007335428 0.109198356 0.071362606 3 4 3.5 0.2 dme-miR-1002-5p 6mer3-8 CTACTT 2R 9592697 9592702 + 2R_9592697_9592702_+ 0.895303387 0.931955288 0.913629338 0.025916807 Map60 FBtr0088530 9592414 9592744 2R + 9592642 9592709 3'utr Map60 FlyBase G14380.1 AATGTATTTCTAATATTTGAGATTTCGAATTTGTCCCTATTTAAGGTTGAATATGCTACTTGATTTTA 13 9592694 0.989261666 7 12 127 0.941176471 1.204119983 0.058823529 0.230769231 0.411764706 13 1 0 16 2R:9592642-9592709 6 Map60 FBtr0088530 9592414 9592744 CTACTT 6mer3-8 dme-miR-1002-5p 2R + 9592643 9592713 3'utr Map60 FlyBase G10945.2 ATGTATTTCTAATATTTGAGATTTCGAATTTGTCCCTATTTAAGGTTGAATATGCTACTTGATTTTAAAAT 11 9592693 0.989272958 10 10 91 0.882352941 1.176091259 0 0.363636364 0.588235294 11 2 0 15 2R:9592643-9592713 6 6 1373 FBgn0010342 1158.76 77.84 119.11 0.005177949 0.077081192 0.050373604 3 4 3.5 0.2 dme-miR-277-3p 7mer-m8 TGCATTT 2R 9605313 9605319 + 2R_9605313_9605319_+ 0.360597057 0.358206277 0.359401667 0.001690551 CG1902 FBtr0088531|FBtr0088532 9604941|9604941 9605624|9605624 2R + 9605263 9605331 3'utr CG1902 FlyBase G14388.2 TACACATTCTAACGTCCGGTCGAACGATTCATTCTACCATGATCCCATAATGCATTTTCATGATGAAAT 16 9605310 0.848544397 7 14 91 0.882352941 1.176091259 0.235294118 0.0625 0.117647059 16 2 0 15 2R:9605263-9605331 7 CG1902 FBtr0088531|FBtr0088532 9604941|9604941 9605624|9605624 TGCATTT 7mer-m8 dme-miR-277-3p 2R + 9605288 9605314 3'utr CG1902 FlyBase G10949.1 GATTCATTCTACCATGATCCCATAATG 7 9605310 0.695002709 2 5 40 0.888888889 0.903089987 0.333333333 0.285714286 0.444444444 7 1 0 8 2R:9605288-9605314 2 6 1374 FBgn0033434 795.9833333 54.22333333 82.71333333 0.007537846 0.11065347 0.072539695 3 3 3 0.2 dme-miR-277-3p 7mer-m8 TGCATTT 2R 9688649 9688655 - 2R_9688649_9688655_- 0.620159173 0.608550636 0.614354904 0.00820852 Uba1 FBtr0339517|FBtr0088499 9688287|9688287 9688767|9688767 2R - 9688527 9688676 3'utr Uba1 FlyBase G21476.2 AGGAGTTACTGTCTAGCTGTTTGCATTTTAATTTTCACAACACCATTACGAGAGCAGCCCAGATCTAGAAATTATATAAAATGTGTGTGAATCCTCTAAGGAATGGCAAAATAATACGCATCATACGAAATACAAAGACTCGACTAAAAG 33 9688656 0.978934507 14 30 218 0.923076923 1.079181246 0.153846154 0.181818182 0.307692308 33 1 2 36 2R:9688527-9688676 7 Uba1 FBtr0339517|FBtr0088499 9688287|9688287 9688767|9688767 TGCATTT 7mer-m8 dme-miR-277-3p 2R - 9688569 9688727 3'utr Uba1 FlyBase G16298.1 GATCCCGTTTTGTTGTCGGCGACGCGTTTTGGAATCGCGCAGCTCCAACGAAGGAGTTACTGTCTAGCTGTTTGCATTTTAATTTTCACAACACCATTACGAGAGCAGCCCAGATCTAGAAATTATATAAAATGTGTGTGAATCCTCTAAGGAATGGCA 27 9688655 0.984298163 15 24 194 0.909090909 1.602059991 0.25 0.481481481 0.681818182 27 4 0 40 2R:9688569-9688727 7 9.5 1375 FBgn0023143 3506.563333 97.42 149.3233333 0.002709205 0.09751591 0.063620332 1 0 0.5 0.2 dme-bantam-3p 7mer-m8 TGATCTC 2R 9715858 9715864 + 2R_9715858_9715864_+ 0.661614946 0.661615237 0.661615092 2.12E-07 dap FBtr0088469 9715082 9716256 2R + 9715780 9715955 3'utr dap FlyBase G14412.1 TGAATGCCGCCGAATGGACACAAATTGTCGCGCTCTCATTTCTTAACCAGTGCTAAAAATGTCTTTTATGATTTGCTATGATCTCTGGGCAAATTATGAAAACAATTTTGCCTGAAACTATCATGTACAAAAACTAGATTATTATACATACTATACACATAGGCAGAGCCTATTCT 1243 9715858 0.984773314 31 1202 9666 0.966003849 1.922552467 0.050032072 0.201930813 0.363694676 1243 36 17 1506 2R:9715780-9715955 7 dap FBtr0088469 9715082 9716256 TGATCTC 7mer-m8 dme-bantam-3p 2R + 9715780 9715926 3'utr dap FlyBase G10962.1 TGAATGCCGCCGAATGGACACAAATTGTCGCGCTCTCATTTCTTAACCAGTGCTAAAAATGTCTTTTATGATTTGCTATGATCTCTGGGCAAATTATGAAAACAATTTTGCCTGAAACTATCATGTACAAAAACTAGATTATTATAC 818 9715858 0.941397623 28 782 6291 0.955028618 2.026050158 0.061324612 0.376528117 0.582992641 818 45 10 1168 2R:9715780-9715926 7 930 1376 FBgn0010316 804.5033333 38.63 59.20333333 1.155992724 24.07455346 15.70857497 0 0 0 0.2 dme-miR-8-3p 6mer2-7 AGTATT 2R 9716011 9716016 + 2R_9716011_9716016_+ 0.817275501 0.833331847 0.825303674 0.011353519 dap FBtr0088469 9715082 9716256 2R + 9715986 9716053 3'utr dap FlyBase G14413.1 AAGGCCTAACTAAGAACAAATCCAAAGTATTCTCCTAATATTTATATGTATAGACACTCTATGTATAA 30 9716014 0.942748006 7 29 168 0.96875 1.491361694 0.03125 0.066666667 0.125 30 1 0 31 2R:9715986-9716053 6 dap FBtr0088469 9715082 9716256 AGTATT 6mer2-7 dme-miR-8-3p 2R + 9715982 9716029 3'utr dap FlyBase G10963.1 TTGTAAGGCCTAACTAAGAACAAATCCAAAGTATTCTCCTAATATTTA 21 9716014 0.968472255 7 19 106 0.862068966 0.920818754 0 0.285714286 0.482758621 21 2 2 25 2R:9715982-9716029 6 21.5 1377 FBgn0010316 804.5033333 38.63 59.20333333 0.026724563 0.556562257 0.363155228 -3 -3 -3 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2R 9845106 9845112 + 2R_9845106_9845112_+ 0.787348154 0.768073266 0.77771071 0.013629412 CG1667 FBtr0345019|FBtr0345020 9845083|9845083 9845512|9845512 2R + 9845001 9845170 stop_codon CG1667 FlyBase G14436.1 AAGGGCAACCTGGTGGATGTTGGCGAATTGCTTGTAGCTCATATGCAAAACAAAACCAAAACTATTGACGAAATTTCCAACTAAGACTTGAAATCAAAAACGATTCCAAAGATTACGTTTTTTAATAATATATATCTATATATTGTAGTAATACCAAATTATTCTAGTTT 156 9845104 0.857336545 20 148 830 0.952631579 1.78055732 0.036842105 0.198717949 0.342105263 156 7 2 181 2R:9845001-9845170 7 CG1667 FBtr0345019|FBtr0345020 9845083|9845083 9845512|9845512 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 9844999 9845127 stop_codon CG1667 FlyBase G10980.1 GCAAGGGCAACCTGGTGGATGTTGGCGAATTGCTTGTAGCTCATATGCAAAACAAAACCAAAACTATTGACGAAATTTCCAACTAAGACTTGAAATCAAAAACGATTCCAAAGATTACGTTTTTTAATA 107 9845104 0.95303902 15 105 488 0.97515528 2.195899652 0.043478261 0.345794393 0.565217391 107 4 0 157 2R:9844999-9845127 7 83 1378 FBgn0033453 439.85 39.39 60.12 0.188700693 2.10713379 1.380572189 2 2 2 0.2 dme-miR-184-5p 6mer3-8 TGATAA 2R 9851055 9851060 - 2R_9851055_9851060_- 0.63586328 0.830655413 0.733259346 0.137738815 CG1516 FBtr0088457|FBtr0088460|FBtr0088459|FBtr0088454|FBtr0088455|FBtr0088462|FBtr0088458|FBtr0088461|FBtr0088456|FBtr0300850 9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701 9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136 2R - 9850989 9851089 3'utr CG1516 FlyBase G21513.1 ACACCCAATGTAAAATTAAGTGAAAACAGTGATAATCTTAGGGACTCTGTCAGTTCGATTGATCATAAAACTGTCCAAAGTCGCCTGTGTCTATTTTTATA 25 9851069 0.98500596 9 20 167 0.821428571 1.361727836 0.071428571 0.166666667 0.285714286 24 5 0 23 2R:9850989-9851089 6 CG1516 FBtr0088456|FBtr0300850|FBtr0088455|FBtr0088462|FBtr0088458|FBtr0088461|FBtr0088459|FBtr0088454|FBtr0088457|FBtr0088460 9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701|9850701 9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136|9851136 TGATAA 6mer3-8 dme-miR-184-5p 2R - 9851051 9851103 3'utr CG1516 FlyBase G16337.2 AGCTGCCACCGCACACACCCAATGTAAAATTAAGTGAAAACAGTGATAATCTT 14 9851069 0.975918626 5 12 72 0.9 1.255272505 0.05 0.357142857 0.55 14 2 0 18 2R:9851051-9851103 6 14.5 1379 FBgn0027580 357.3333333 9.89 15.28666667 0.040578358 1.466127401 0.948539032 9 9 9 0.2 dme-miR-1012-3p 6mer2-7 TGACTA 2R 9877042 9877047 - 2R_9877042_9877047_- 0.934068417 0.972750354 0.953409385 0.027352305 Sec24AB FBtr0339406|FBtr0088451|FBtr0339407 9876230|9876230|9876230 9877125|9877125|9877125 2R - 9876985 9877145 stop_codon Sec24AB FlyBase G21539.1 TTCGGGCTCAGGTTAAATAGTATATAAGCAGGATATCCTACCACTATTGTATGCAGCATAAATACGAGTTTCTAAGAACCTAAAAACTCAGACTCTGGTGACTAGAAGCACGAAGCGAATGCAGGTGACACTGGTGCGAAACAATGGAGACCAGTTCGGGA 45 9877050 0.997688203 14 44 226 0.980392157 1.698970004 0.078431373 0.133333333 0.235294118 45 1 0 50 2R:9876985-9877145 6 Sec24AB FBtr0339407|FBtr0088451|FBtr0339406 9876230|9876230|9876230 9877125|9877125|9877125 TGACTA 6mer2-7 dme-miR-1012-3p 2R - 9877003 9877122 3'utr Sec24AB FlyBase G16352.1 ATAAGCAGGATATCCTACCACTATTGTATGCAGCATAAATACGAGTTTCTAAGAACCTAAAAACTCAGACTCTGGTGACTAGAAGCACGAAGCGAATGCAGGTGACACTGGTGCGAAACA 39 9877050 0.865125135 13 36 188 0.966666667 1.763427994 0.15 0.358974359 0.583333333 39 2 0 58 2R:9877003-9877122 6 17.5 1380 FBgn0033460 661.8766667 16.61 25.35 0.026439971 1.053582179 0.690335306 3 3 3 0.2 dme-miR-965-3p 7mer-m8 TACGCTT 2R 9882784 9882790 - 2R_9882784_9882790_- 0.4828797 0.410806569 0.446843134 0.050963378 CG1513 FBtr0331955|FBtr0088450|FBtr0302176 9882570|9882570|9882570 9883756|9883756|9884080 2R - 9882753 9882843 3'utr CG1513 FlyBase G21563.1 TCTACCGACTACTCTCACGCAAAGTTAACGCAAAATGAAACGAATAAAGTAAATACGCTTCGAAATTGATTTAAAGTAATATTTAACGAAC 32 9882790 0.957203199 6 31 151 0.976190476 1.612783857 0.333333333 0.21875 0.404761905 32 1 0 41 2R:9882753-9882843 7 CG1513 FBtr0088450|FBtr0302176|FBtr0331955 9882570|9882570|9882570 9883756|9884080|9883756 TACGCTT 7mer-m8 dme-miR-965-3p 2R - 9882769 9882803 3'utr CG1513 FlyBase G16371.1 CGAATAAAGTAAATACGCTTCGAAATTGATTTAAA 17 9882790 0.838328462 2 16 77 0.925925926 1.397940009 0.333333333 0.411764706 0.62962963 17 2 0 25 2R:9882769-9882803 7 21.5 1381 FBgn0033463 1345.3 46.16 70.75666667 0.015981565 0.465771231 0.303858294 0 0 0 0.2 dme-miR-1007-3p 6mer3-8 TGAGCT 2R 9916217 9916222 - 2R_9916217_9916222_- 0.653558647 0.959762444 0.806660545 0.216518783 Mef2 FBtr0330707|FBtr0088445|FBtr0330708|FBtr0088444|FBtr0088446|FBtr0088447|FBtr0088443 9915500|9913494|9915500|9916116|9916116|9913494|9916116 9916745|9916745|9916454|9916745|9916745|9916745|9916745 2R - 9916195 9916232 3'utr Mef2 FlyBase G21585.1 GTTAGAGTGTTGAGCTGATTTAGTTTAGTTACAATTAC 6 9916214 0.706100947 4 6 63 1 1.041392685 0.909090909 0.5 0.727272727 6 0 0 11 2R:9916195-9916232 6 Mef2 FBtr0088446|FBtr0088447|FBtr0088443|FBtr0330707|FBtr0088445|FBtr0330708|FBtr0088444 9916116|9913494|9916116|9915500|9913494|9915500|9916116 9916745|9916745|9916745|9916745|9916745|9916454|9916745 TGAGCT 6mer3-8 dme-miR-1007-3p 2R - 9916201 9916234 3'utr Mef2 FlyBase G16385.1 ATGTTAGAGTGTTGAGCTGATTTAGTTTAGTTAC 9 9916222 0.776739322 4 7 106 0.733333333 0.740362689 0.6 0.555555556 0.733333333 9 3 1 11 2R:9916201-9916234 6 6.5 1382 FBgn0011656 531.1733333 15.92 24.39333333 0.01223706 0.408291457 0.266466248 -8 0 -4 0.2 dme-miR-307a-3p 6mer2-7 GTTGTG 2R 9962774 9962779 + 2R_9962774_9962779_+ 0.657564099 0.863509407 0.760536753 0.145625318 Pal1 FBtr0339422 9962739 9963031 2R + 9962747 9962821 3'utr Pal1 FlyBase G14480.2 GTGCTAACTCCTCACTCAATGTCCTGTGTTGTGCTGTCACACTTAACTGATTTAGTGTCCTGTACTTATAAGCTC 174 9962766 0.820377491 19 165 1679 0.955445545 1.507406059 0.173267327 0.137931034 0.257425743 174 4 5 193 2R:9962747-9962821 6 Pal1 FBtr0339422 9962739 9963031 GTTGTG 6mer2-7 dme-miR-307a-3p 2R + 9962747 9962821 3'utr Pal1 FlyBase G11011.1 GTGCTAACTCCTCACTCAATGTCCTGTGTTGTGCTGTCACACTTAACTGATTTAGTGTCCTGTACTTATAAGCTC 98 9962766 0.809110673 16 95 910 0.981707317 1.90579588 0.18902439 0.428571429 0.658536585 98 2 1 161 2R:9962747-9962821 6 109 1383 FBgn0033466 329.6666667 20.27 30.62666667 0.330637007 5.377405032 3.558989987 8 8 8 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 9962909 9962915 + 2R_9962909_9962915_+ 0.661567688 0.661615555 0.661591622 3.39E-05 Pal1 FBtr0339422 9962739 9963031 2R + 9962864 9962930 3'utr Pal1 FlyBase G14481.1 ACGCTTTTTTTGGTGTCGTTAATTACACAGCATGTCCACTTCTTGTGTGTTCTGTATTCGTTGGCTT 14 9962916 0.659987744 6 13 153 0.944444444 1.230448921 0.055555556 0.142857143 0.333333333 14 1 0 17 2R:9962864-9962930 7 Pal1 FBtr0339422 9962739 9963031 TGTGTTC 7mer-m8 dme-miR-317-3p 2R + 9962890 9962948 3'utr Pal1 FlyBase G11012.1 ACAGCATGTCCACTTCTTGTGTGTTCTGTATTCGTTGGCTTACTTTTCGTTCAACTTTA 17 9962907 0.992088512 7 14 165 1 1.397940009 0 0.352941176 0.56 17 0 0 25 2R:9962890-9962948 7 11 1384 FBgn0033466 329.6666667 20.27 30.62666667 0.033367037 0.542673902 0.359164127 -7 2 -2.5 0.2 dme-miR-252-5p 6mer3-8 GTACTT 3L 10220647 10220652 - 3L_10220647_10220652_- 0.913590286 0.839338229 0.876464258 0.052504163 scramb1 FBtr0076301|FBtr0076303|FBtr0076302 10220483|10220483|10220481 10221072|10221072|10221072 3L - 10220625 10220693 3'utr scramb1 FlyBase G35927.1 GAAGCGACAACTAACTAACGAATGATTCGTTATTGAAACATGTACTTTAAACTGTATGTTAAGTGTCTT 16 10220653 0.942159545 6 14 136 0.944444444 1.230448921 0.111111111 0.125 0.222222222 16 1 0 17 3L:10220625-10220693 6 scramb1 FBtr0076302|FBtr0076303|FBtr0076301 10220481|10220483|10220483 10221072|10221072|10221072 GTACTT 6mer3-8 dme-miR-252-5p 3L - 10220629 10220704 3'utr scramb1 FlyBase G27180.1 ATTGATGCTCTGAAGCGACAACTAACTAACGAATGATTCGTTATTGAAACATGTACTTTAAACTGTATGTTAAGTG 11 10220653 0.989309492 6 11 101 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 3L:10220629-10220704 6 9.5 1385 FBgn0052056 455.3333333 27.11666667 41.42333333 0.020863836 0.350338045 0.229339342 1 1 1 0.2 dme-miR-79-3p 7mer-A1 AGCTTTA 3L 10220719 10220725 - 3L_10220719_10220725_- 0.821875912 0.789452233 0.805664072 0.022927018 scramb1 FBtr0076301|FBtr0076303|FBtr0076302 10220483|10220483|10220481 10221072|10221072|10221072 3L - 10220711 10220742 3'utr scramb1 FlyBase G35928.1 GTATTCAACGACAAATCAGCTTTATTTATGAA 8 10220727 0.970590523 2 8 50 1 1.041392685 0.181818182 0.25 0.454545455 8 0 0 11 3L:10220711-10220742 7 scramb1 FBtr0076302|FBtr0076303|FBtr0076301 10220481|10220483|10220483 10221072|10221072|10221072 AGCTTTA 7mer-A1 dme-miR-79-3p 3L - 10220706 10220758 3'utr scramb1 FlyBase G27181.1 CAATTACTTGTGTAAAGTATTCAACGACAAATCAGCTTTATTTATGAATTTTG 14 10220727 0.962669746 4 13 102 1 1.278753601 0.157894737 0.214285714 0.421052632 14 0 0 19 3L:10220706-10220758 7 10 1386 FBgn0052056 455.3333333 27.11666667 41.42333333 0.021961933 0.36877689 0.241409833 2 2 2 0.2 dme-miR-7-5p 6mer3-8 GTCTTC 3L 10220909 10220914 - 3L_10220909_10220914_- 0.991037119 0.995760102 0.99339861 0.003339665 scramb1 FBtr0076301|FBtr0076303|FBtr0076302 10220483|10220483|10220481 10221072|10221072|10221072 3L - 10220890 10220952 3'utr scramb1 FlyBase G35930.1 TTTATCCAAATATCTTCCCGGTGAACTGTCGCGTACTAGTCTTCTGTACCAAATGCTTATTGA 34 10220911 0.709349063 7 31 253 0.976744186 1.62324929 0.139534884 0.264705882 0.418604651 34 1 0 42 3L:10220890-10220952 6 scramb1 FBtr0076302|FBtr0076303|FBtr0076301 10220481|10220483|10220483 10221072|10221072|10221072 GTCTTC 6mer3-8 dme-miR-7-5p 3L - 10220894 10220944 3'utr scramb1 FlyBase G27183.1 AATATCTTCCCGGTGAACTGTCGCGTACTAGTCTTCTGTACCAAATGCTTA 27 10220910 0.969422433 3 27 207 1 1.662757832 0.173913043 0.444444444 0.673913043 27 0 0 46 3L:10220894-10220944 6 27 1387 FBgn0052056 455.3333333 27.11666667 41.42333333 0.059297218 0.995697603 0.65180655 -3 -4 -3.5 0.2 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 10591542 10591549 + 3L_10591542_10591549_+ 0.668663475 0.668634764 0.66864912 2.03E-05 A2bp1 FBtr0305093|FBtr0305096|FBtr0332985|FBtr0305095 10590564|10590564|10590564|10590564 10593403|10593403|10594012|10594012 3L + 10591502 10591688 5'utr A2bp1 FlyBase G29412.1 AATGCATTGCTTGGTTGTTCCTAATAATTTTATATATTTTGGCAGCTAAAACCACTCACACTCAACTCACGACTCAATTCGAATTGCTCAAAAAAAAATCGTAGCGCATAGGTAAATGCAAAAGATCAACACGTAGACATATCCTTGGAATATACAATAATATTTACTTTAAATGCCGCCATAGCAG 121 10591541 0.983832149 19 112 862 0.927631579 1.848189117 0.019736842 0.214876033 0.375 121 10 1 141 3L:10591502-10591688 8 A2bp1 FBtr0305095|FBtr0332985|FBtr0305096|FBtr0305093 10590564|10590564|10590564|10590564 10594012|10594012|10593403|10593403 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L + 10591502 10591564 5'utr A2bp1 FlyBase G22256.1 AATGCATTGCTTGGTTGTTCCTAATAATTTTATATATTTTGGCAGCTAAAACCACTCACACTC 74 10591541 0.769587865 12 67 530 0.919191919 1.658011397 0 0.256756757 0.444444444 74 7 1 91 3L:10591502-10591564 8 82.5 1388 FBgn0052062 354.2866667 11.58666667 17.8 0.232862277 7.120253165 4.634831461 1 1 1 0.2 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 10592110 10592117 + 3L_10592110_10592117_+ 0.668639265 0.668675944 0.668657605 2.59E-05 A2bp1 FBtr0305093|FBtr0305096|FBtr0332985|FBtr0305095 10590564|10590564|10590564|10590564 10593403|10593403|10594012|10594012 3L + 10592071 10592136 5'utr A2bp1 FlyBase G29413.1 ATGCTCAATGGAAAATAAGCGAACAAACTTTGATTCTTAGGCAGCTACTGTCGTCAAATTTAAACT 76 10592108 0.988454678 11 69 628 0.913978495 1.327358934 0.161290323 0.197368421 0.344086022 76 5 3 85 3L:10592071-10592136 8 A2bp1 FBtr0305095|FBtr0332985|FBtr0305096|FBtr0305093 10590564|10590564|10590564|10590564 10594012|10594012|10593403|10593403 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L + 10592087 10592133 5'utr A2bp1 FlyBase G22258.1 AAGCGAACAAACTTTGATTCTTAGGCAGCTACTGTCGTCAAATTTAA 56 10592108 0.800372247 9 51 483 0.93258427 1.618048097 0.247191011 0.428571429 0.640449438 56 5 1 83 3L:10592087-10592133 8 65 1389 FBgn0052062 354.2866667 11.58666667 17.8 0.183467249 5.609896433 3.651685393 2 2 2 0.2 dme-miR-1003-3p 6mer2-7 TGTGAG 3L 10641055 10641060 - 3L_10641055_10641060_- 0.893870925 0.795615007 0.844742966 0.069477413 CG32066 FBtr0076278|FBtr0076277 10640284|10640414 10641200|10641200 3L - 10640962 10641079 3'utr CG32066 FlyBase G35946.1 TGTATTATTTGTAAAAAATTGTGAGCGAGTGTTGTGCTAGCAGGAGGCAACCTCTAGTTTTATTTTTACCCTGTGTGCATTTCCAGCATTTGTTTCGTACTGTTTTAGACTCCAGCCT 65 10641061 0.947171997 9 61 465 0.951219512 1.892094603 0.146341463 0.169230769 0.341463415 65 4 0 78 3L:10640962-10641079 6 CG32066 FBtr0076277|FBtr0076278 10640414|10640284 10641200|10641200 TGTGAG 6mer2-7 dme-miR-1003-3p 3L - 10641035 10641085 3'utr CG32066 FlyBase G27193.1 GGCTTCTGTATTATTTGTAAAAAATTGTGAGCGAGTGTTGTGCTAGCAGGA 52 10641061 0.75648163 6 47 369 0.884615385 1.838849091 0.205128205 0.423076923 0.615384615 52 9 0 69 3L:10641035-10641085 6 53 1390 FBgn0052066 3082.423333 164.4233333 252.2266667 0.017194264 0.322338679 0.210128456 1 1 1 0.2 dme-miR-283-5p 8mer-m1 TGATATTT 3L 10664398 10664405 + 3L_10664398_10664405_+ 0.534171244 0.554116272 0.544143758 0.014103315 CG32068 FBtr0113421 10664364 10664435 3L + 10664374 10664433 3'utr CG32068 FlyBase G29436.1 AATCTTATCTTTTACCATCAAGTTTGATATTTTGAAATATAAAATCGCTGTGTATAATCA 21 10664397 0.793768151 8 20 189 0.96 1.380211242 0.2 0.095238095 0.24 21 1 0 24 3L:10664374-10664433 8 CG32068 FBtr0113421 10664364 10664435 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 10664382 10664415 3'utr CG32068 FlyBase G22277.1 CTTTTACCATCAAGTTTGATATTTTGAAATATAA 8 10664397 0.757373083 3 6 72 0.818181818 0.954242509 0.090909091 0.375 0.545454545 8 2 0 9 3L:10664382-10664415 8 10 1391 FBgn0052068 230.5566667 42.00666667 63.54666667 0.043373285 0.238057451 0.157364666 1 1 1 0.2 dme-miR-33-5p 7mer-A1 AATGCAA 3L 10689467 10689473 + 3L_10689467_10689473_+ 0.649247584 0.654706008 0.651976796 0.003859672 simj FBtr0331574 10689109 10690734 3L + 10689391 10689493 3'utr simj FlyBase G29447.1 AGTTTCCCTTTTTGTTACACCACTGCATTACATATTTTAATTAATTTGCCAGCCAGAATATAGCAGCCGATAAATGAATGCAAACTTTTAAGCTCCTAGTAAT 53 10689465 0.965463571 9 51 279 0.96875 1.792391689 0.046875 0.169811321 0.3125 53 2 0 62 3L:10689391-10689493 7 simj FBtr0331574 10689109 10690734 AATGCAA 7mer-A1 dme-miR-33-5p 3L + 10689450 10689490 3'utr simj FlyBase G22282.1 ATAGCAGCCGATAAATGAATGCAAACTTTTAAGCTCCTAGT 19 10689465 0.839271138 2 18 96 0.935483871 0.985276743 0 0.473684211 0.677419355 19 0 2 29 3L:10689450-10689490 7 32.5 1392 FBgn0010762 1928.513333 47.80333333 73.36666667 0.01685236 0.679868907 0.442980463 2 2 2 0.2 dme-miR-995-5p 6mer3-8 AATTCG 3L 10689723 10689728 + 3L_10689723_10689728_+ 0.641092245 0.612921398 0.627006822 0.019919764 simj FBtr0331574 10689109 10690734 3L + 10689710 10689756 3'utr simj FlyBase G29449.1 AATTTTGTCGTACAATTCGTTTAGTTCTTAGCATCGTGAATAAATCT 14 10689725 0.792464415 7 12 137 0.866666667 1.113943352 0 0.071428571 0.133333333 14 2 0 13 3L:10689710-10689756 6 simj FBtr0331574 10689109 10690734 AATTCG 6mer3-8 dme-miR-995-5p 3L + 10689710 10689757 3'utr simj FlyBase G22284.1 AATTTTGTCGTACAATTCGTTTAGTTCTTAGCATCGTGAATAAATCTA 9 10689725 0.805875635 4 9 95 1 1.113943352 0 0.222222222 0.461538462 9 0 0 13 3L:10689710-10689757 6 9 1393 FBgn0010762 1928.513333 47.80333333 73.36666667 0.004666807 0.18827139 0.122671513 -2 -2 -2 0.2 dme-miR-283-5p 8mer-A1 TGATATTA 3L 10691907 10691914 + 3L_10691907_10691914_+ 0.589378058 0.529477967 0.559428013 0.042355767 CG11811 FBtr0076265 10691876 10692598 3L + 10691876 10691953 stop_codon CG11811 FlyBase G29452.1 AAGGCGAAGCATTTTGCGGACGAATGTAGAATGATATTAACCTCAATGGGGTGGGGGTAGAAATTGTTTGTGAACTGA 23 10691912 0.91703048 11 22 141 0.962962963 1.414973348 0.074074074 0.173913043 0.296296296 23 1 0 26 3L:10691876-10691953 8 CG11811 FBtr0076265 10691876 10692598 TGATATTA 8mer-A1 dme-miR-283-5p 3L + 10691847 10691956 stop_codon CG11811 FlyBase G22287.1 GAAGCAGGGAGTATCAGTTAACTTGAATTAAGGCGAAGCATTTTGCGGACGAATGTAGAATGATATTAACCTCAATGGGGTGGGGGTAGAAATTGTTTGTGAACTGATCG 29 10691922 0.974754139 12 28 172 0.953488372 1.612783857 0.093023256 0.379310345 0.581395349 29 2 0 41 3L:10691847-10691956 8 17 1394 FBgn0036099 1176.04 91.50333333 140.2833333 0.014455291 0.185785582 0.121183319 -5 -15 -10 0.2 dme-miR-932-5p 7mer-A1 GAATTGA 3L 10874507 10874513 + 3L_10874507_10874513_+ 0.578155643 0.551004085 0.564579864 0.01919901 tna FBtr0076268|FBtr0301658|FBtr0076267 10874466|10874466|10874466 10875743|10876496|10874646 3L + 10874486 10874619 5'utr tna FlyBase G29488.1 CGAAGCTGGGAGAGAGTTGGAGAATTGAAGTGGCAGAATACCATAAATTGTATATAGTATTATTAATTTTAATGAAATGTGCACTAGACGCCAGTCGCGTACTTCAACCAACATTTTCGTTTCCTCACACAAAC 225 10874503 0.799852762 23 203 1561 0.902040816 1.566241023 0.363265306 0.08 0.155102041 225 19 5 221 3L:10874486-10874619 7 tna FBtr0301658|FBtr0076267|FBtr0076268 10874466|10874466|10874466 10876496|10874646|10875743 GAATTGA 7mer-A1 dme-miR-932-5p 3L + 10874486 10874597 5'utr tna FlyBase G22312.1 CGAAGCTGGGAGAGAGTTGGAGAATTGAAGTGGCAGAATACCATAAATTGTATATAGTATTATTAATTTTAATGAAATGTGCACTAGACGCCAGTCGCGTACTTCAACCAAC 182 10874503 0.766769667 25 157 1145 0.88030888 1.579783597 0.498069498 0.324175824 0.525096525 182 26 5 228 3L:10874486-10874597 7 131.5 1395 FBgn0026160 929.45 23.40666667 36.18333333 0.141481521 5.618057533 3.634269922 4 4 4 0.2 dme-miR-79-3p 6mer3-8 TAGCTT 3L 10875278 10875283 + 3L_10875278_10875283_+ 0.998964748 0.999993684 0.999479216 0.000727613 tna FBtr0076268|FBtr0301658 10874466|10874466 10875743|10876496 3L + 10875198 10875297 5'utr tna FlyBase G29492.1 AATGAAAACATTTACATTTTAATTGTTGCATAATTTTAATTATTTTTTAAAGCCTATCTACATATTAAAAGTAAATGATTTAGCTTGGTAAACGATAAAC 25 10875277 0.981358984 9 25 190 1 1.477121255 0.2 0.2 0.333333333 25 0 0 30 3L:10875198-10875297 6 tna FBtr0301658|FBtr0076268 10874466|10874466 10876496|10875743 TAGCTT 6mer3-8 dme-miR-79-3p 3L + 10875261 10875291 5'utr tna FlyBase G22317.1 ATTAAAAGTAAATGATTTAGCTTGGTAAACG 15 10875277 0.642842143 4 15 96 1 1.397940009 0.4 0.466666667 0.68 15 0 0 25 3L:10875261-10875291 6 17 1396 FBgn0026160 929.45 23.40666667 36.18333333 0.018290387 0.726288807 0.469829572 1 1 1 0.2 dme-miR-968-5p 6mer3-8 ACTACT 3L 10895162 10895167 - 3L_10895162_10895167_- 0.988174286 0.999995024 0.994084655 0.008358497 Aps FBtr0076250|FBtr0076252 10894774|10894774 10896130|10896130 3L - 10895138 10895181 3'utr Aps FlyBase G35980.1 TATGAACTAATTCAACTACTAAGATACGTGCACGTTGTACTTTT 5 10895164 0.987905902 4 4 36 0.833333333 0.698970004 0 0.2 0.333333333 5 1 0 5 3L:10895138-10895181 6 Aps FBtr0076252|FBtr0076250 10894774|10894774 10896130|10896130 ACTACT 6mer3-8 dme-miR-968-5p 3L - 10895128 10895183 3'utr Aps FlyBase G27213.1 ATTATGAACTAATTCAACTACTAAGATACGTGCACGTTGTACTTTTCAGATGCAAA 6 10895162 0.966027961 4 6 33 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 3L:10895128-10895183 6 4 1397 FBgn0036111 1989.25 99.36 152.7433333 0.002010808 0.040257649 0.026187722 -3 -5 -4 0.2 dme-miR-283-5p 8mer-m1 TGATATTT 3L 11059485 11059492 + 3L_11059485_11059492_+ 0.478520931 0.527308408 0.50291467 0.034497972 CG7888 FBtr0076200|FBtr0076199|FBtr0076201 11059249|11059249|11059249 11059659|11059659|11059659 3L + 11059455 11059522 3'utr CG7888 FlyBase G29503.1 TGTGTATTTGTATAGAATTTAACAGATTTGTGATATTTTTAGCGTCATGCCCAAGAATCTGTACAACA 88 11059481 0.821243861 12 82 894 0.956521739 1.56427143 0.043478261 0.227272727 0.408695652 88 3 2 110 3L:11059455-11059522 8 CG7888 FBtr0076201|FBtr0076200|FBtr0076199 11059249|11059249|11059249 11059659|11059659|11059659 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 11059458 11059526 3'utr CG7888 FlyBase G22326.2 GTATTTGTATAGAATTTAACAGATTTGTGATATTTTTAGCGTCATGCCCAAGAATCTGTACAACAAACG 43 11059481 0.811333434 11 39 396 0.867647059 1.071882007 0.088235294 0.441860465 0.647058824 43 5 4 59 3L:11059458-11059526 8 56 1398 FBgn0036116 3.67 0.246666667 0.366666667 15.25885559 227.027027 152.7272727 4 4 4 0.2 dme-bantam-3p 6mer2-7 GATCTC 3L 11066225 11066230 + 3L_11066225_11066230_+ 0.672471563 0.995108319 0.833789941 0.228138598 CG45101 FBtr0344636 11065373 11069025 3L + 11066211 11066235 3'utr CG45101 FlyBase G29509.1 TCAGTAAGCGCATAGATCTCGAGGA 6 11066223 0.758607848 2 4 18 0.857142857 0.77815125 0.571428571 0.166666667 0.285714286 6 1 0 6 3L:11066211-11066235 6 CG45101 FBtr0344636 11065373 11069025 GATCTC 6mer2-7 dme-bantam-3p 3L + 11066211 11066238 3'utr CG45101 FlyBase G22332.1 TCAGTAAGCGCATAGATCTCGAGGAATA 7 11066223 0.896611907 2 5 24 0.8 1.079181246 0 0.857142857 0.933333333 7 3 0 12 3L:11066211-11066238 6 6.5 1399 FBgn0266540 111.74 3.59 5.523333333 0.058170754 1.810584958 1.176825588 2 2 2 0.2 dme-bantam-3p 8mer-A1 TGATCTCA 3L 11066820 11066827 + 3L_11066820_11066827_+ 0.613242589 0.614414747 0.613828668 0.0008288 CG45101 FBtr0344636 11065373 11069025 3L + 11066791 11066844 3'utr CG45101 FlyBase G29510.1 AGCAAAAAAACGTCACCGCGCAAAAAAGCTGATCTCACCGATTCCGAAGAGGAT 26 11066820 0.919586977 3 24 79 0.933333333 1.447158031 0.4 0.115384615 0.233333333 26 2 0 28 3L:11066791-11066844 8 CG45101 FBtr0344636 11065373 11069025 TGATCTCA 8mer-A1 dme-bantam-3p 3L + 11066799 11066839 3'utr CG45101 FlyBase G22333.1 AACGTCACCGCGCAAAAAAGCTGATCTCACCGATTCCGAAG 16 11066820 0.920649309 3 16 39 1 1.322219295 0.238095238 0.25 0.428571429 16 0 0 21 3L:11066799-11066839 8 21 1400 FBgn0266540 111.74 3.59 5.523333333 0.187936281 5.849582173 3.802051901 0 0 0 0.2 dme-miR-14-3p 6mer3-8 AAGACT 3L 11112028 11112033 + 3L_11112028_11112033_+ 0.808974371 0.646520998 0.727747685 0.114871901 CG7638 FBtr0076210 11111863 11112117 3L + 11112014 11112063 3'utr CG7638 FlyBase G29528.1 TAAAGTGTGTTTTAAAGACTTTTAACCAGGCTGCCCGGAGAGTAACCAAA 35 11112035 0.819411551 5 35 252 1 1.612783857 0.243902439 0.171428571 0.292682927 35 0 0 41 3L:11112014-11112063 6 CG7638 FBtr0076210 11111863 11112117 AAGACT 6mer3-8 dme-miR-14-3p 3L + 11111992 11112062 3'utr CG7638 FlyBase G22341.1 ATACTACCTAACTCATTGTTTATAAAGTGTGTTTTAAAGACTTTTAACCAGGCTGCCCGGAGAGTAACCAA 30 11112035 0.750377306 5 28 232 0.926829268 1.579783597 0.219512195 0.366666667 0.536585366 30 3 0 38 3L:11111992-11112062 6 27 1401 FBgn0036133 348.3333333 22.38666667 34.17666667 0.077511962 1.206075045 0.790012679 -7 -7 -7 0.2 dme-miR-1006-3p 6mer2-7 GAATTT 3L 11114974 11114979 - 3L_11114974_11114979_- 0.85859882 0.999972782 0.929285801 0.099966514 fd68A FBtr0300785|FBtr0300786|FBtr0300784|FBtr0301967|FBtr0300783|FBtr0332654|FBtr0332653|FBtr0332652 11114268|11114167|11114167|11114167|11114268|11114268|11114167|11114167 11115084|11115084|11115084|11115084|11115084|11115084|11115084|11115042 3L - 11114967 11115009 3'utr fd68A FlyBase G36059.1 AAACAAAAAAGTATCTCCATCTTGTATATTGAATTTGCCAATC 8 11114997 0.977652188 5 6 77 0.777777778 0.84509804 0 0.125 0.222222222 8 2 0 7 3L:11114967-11115009 6 fd68A FBtr0332652|FBtr0332653|FBtr0332654|FBtr0300783|FBtr0301967|FBtr0300784|FBtr0300786|FBtr0300785 11114167|11114167|11114268|11114268|11114167|11114167|11114167|11114268 11115042|11115084|11115084|11115084|11115084|11115084|11115084|11115084 GAATTT 6mer2-7 dme-miR-1006-3p 3L - 11114970 11115006 3'utr fd68A FlyBase G27261.1 CAAAAAAGTATCTCCATCTTGTATATTGAATTTGCCA 8 11114987 0.883761298 5 6 70 0.875 0.84509804 0 0.5 0.75 8 1 1 14 3L:11114970-11115006 6 7 1402 FBgn0036134 852.62 30.46666667 46.7 0.008209988 0.2297593 0.149892934 18 8 13 0.2 dme-miR-932-5p 7mer-A1 GAATTGA 3L 11178282 11178288 - 3L_11178282_11178288_- 0.823338815 0.823278864 0.823308839 4.24E-05 GlcAT-P FBtr0076190|FBtr0306254|FBtr0076189|FBtr0100422|FBtr0306255 11176952|11176952|11176952|11176952|11176952 11178417|11178417|11178417|11178417|11178417 3L - 11178246 11178320 3'utr GlcAT-P FlyBase G36087.2 AGGTACAATCCGGCGCACGGAGATACCAATCAGAATTGATCAGATCATTAGTCGGTGTACATTATTATCATAATC 78 11178285 0.736333693 10 72 412 0.948979592 1.667452953 0.214285714 0.207792208 0.37755102 77 4 1 93 3L:11178246-11178320 7 GlcAT-P FBtr0076190|FBtr0306255|FBtr0100422|FBtr0076189|FBtr0306254 11176952|11176952|11176952|11176952|11176952 11178417|11178417|11178417|11178417|11178417 GAATTGA 7mer-A1 dme-miR-932-5p 3L - 11178167 11178318 3'utr GlcAT-P FlyBase G27282.2 GTACAATCCGGCGCACGGAGATACCAATCAGAATTGATCAGATCATTAGTCGGTGTACATTATTATCATAATCATATGATTAGTTAGGCTCTAAGCGCACACATACCTATGATAATTCTTTGCACCGTAGTCTTTGTTTGTTCGCACACCTA 77 11178285 0.746255967 19 73 461 0.930434783 2.029383778 0.156521739 0.363636364 0.573913043 77 8 0 107 3L:11178167-11178318 7 61.5 1403 FBgn0036144 1851.176667 64.88333333 98.86 0.033222113 0.947855125 0.622091847 -3 -3 -3 0.2 dme-miR-92b-3p 6mer3-8 GTGCAA 3L 11227856 11227861 + 3L_11227856_11227861_+ 0.883521543 0.902298348 0.892909946 0.013277203 CG42671 FBtr0304934|FBtr0302699|FBtr0302696|FBtr0302697|FBtr0330283|FBtr0339906|FBtr0304933 11227708|11227708|11227708|11227708|11227741|11227708|11227708 11229635|11228546|11228546|11228546|11228546|11230512|11229635 3L + 11227832 11227881 3'utr CG42671 FlyBase G29560.1 AAACATGCCACACGATCTAACATGGTGCAAGCAGCAGCGGCAGCAGCAGA 33 11227854 0.908619258 2 31 97 0.976190476 1.311753861 0.523809524 0.151515152 0.333333333 33 0 1 41 3L:11227832-11227881 6 CG42671 FBtr0302696|FBtr0302699|FBtr0304934|FBtr0304933|FBtr0339906|FBtr0330283|FBtr0302697 11227708|11227708|11227708|11227708|11227708|11227741|11227708 11228546|11228546|11229635|11229635|11230512|11228546|11228546 GTGCAA 6mer3-8 dme-miR-92b-3p 3L + 11227836 11227876 3'utr CG42671 FlyBase G22362.1 ATGCCACACGATCTAACATGGTGCAAGCAGCAGCGGCAGCA 20 11227854 0.907060548 2 20 63 1 1.579783597 0.473684211 0.55 0.763157895 20 0 0 38 3L:11227836-11227876 6 26 1404 FBgn0261553 751.82 16.21 24.91666667 0.034582746 1.60394818 1.043478261 2 2 2 0.2 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3L 11229809 11229814 + 3L_11229809_11229814_+ 0.846733926 0.856220638 0.851477282 0.00670811 CG42671 FBtr0345849|FBtr0339906|FBtr0339907 11229352|11227708|11229352 11230745|11230512|11230512 3L + 11229789 11229834 3'utr CG42671 FlyBase G29563.1 TATTCTAGCATTGTCGACTTTGGTGCAAATAACTTAAATATTATAC 33 11229809 0.751763781 4 32 278 0.975 1.591064607 0.1 0.181818182 0.325 33 1 0 39 3L:11229789-11229834 6 CG42671 FBtr0345849|FBtr0339907|FBtr0339906 11229352|11229352|11227708 11230745|11230512|11230512 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3L + 11229787 11229828 3'utr CG42671 FlyBase G22366.1 GATATTCTAGCATTGTCGACTTTGGTGCAAATAACTTAAATA 29 11229808 0.761275036 3 27 230 0.975 1.591064607 0.175 0.310344828 0.5 29 1 0 39 3L:11229787-11229828 6 30.5 1405 FBgn0261553 751.82 16.21 24.91666667 0.040568221 1.881554596 1.224080268 0 1 0.5 0.2 dme-bantam-3p 6mer3-8 TGATCT 3L 11254488 11254493 + 3L_11254488_11254493_+ 0.999459477 0.999942039 0.999700758 0.000341179 scyl FBtr0076168|FBtr0339908 11254474|11254474 11255243|11256172 3L + 11254435 11254665 stop_codon scyl FlyBase G29573.2 CCCATAGACCCAGTGCGGCCATCGCCACGCCCACCAACTAATGGTGATCAGCTTGATCTGTCAGATATGCATATGTTCGTATATGTGTCTGCGCGAAACAAAAAAAACACCACCCCTGTGATGATCGAGAGCAGTAGTTTGTTGCAGTTTGAAGTGCAACAACGAAGCAAGTATTCGAAGCCACCCCACCTACACCACACACACACACACACAAACACCTTTAATACACAC 974 11254488 0.826653055 34 923 7015 0.937552743 1.966532813 0.401687764 0.169404517 0.317299578 974 63 11 1111 3L:11254435-11254665 6 scyl FBtr0076168|FBtr0339908 11254474|11254474 11255243|11256172 TGATCT 6mer3-8 dme-bantam-3p 3L + 11254433 11254530 stop_codon scyl FlyBase G22379.1 CGCCCATAGACCCAGTGCGGCCATCGCCACGCCCACCAACTAATGGTGATCAGCTTGATCTGTCAGATATGCATATGTTCGTATATGTGTCTGCGCGA 530 11254488 0.919211239 16 507 4036 0.955762515 1.914343157 0.464493597 0.435849057 0.651920838 530 29 9 821 3L:11254433-11254530 6 655.5 1406 FBgn0041094 3053.616667 135.47 208.0166667 0.214663486 4.838709677 3.151189809 0 0 0 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 11255018 11255024 + 3L_11255018_11255024_+ 0.747480015 0.750539995 0.749010005 0.002163747 scyl FBtr0076168|FBtr0076168|FBtr0076168|FBtr0339908|FBtr0339908|FBtr0339908 11254474|11254474|11254474|11254474|11254474|11254474 11255243|11255243|11255243|11256172|11256172|11256172 3L + 11254967 11255101 3'utr scyl FlyBase G29576.1 ATATTTCTGGGGCATTCGCTTTGGGGCTCGCCGGTCGACAACTCATGAATATGTGATACTGTTTAAGATGCTAAGAGTTTTTTGCCGGATGCACCAAAGTCCGGCAAAAGACGTTGATAAAATTACACATAACAC 379 11255013 0.814937502 27 324 2884 0.860759494 2.133538908 0.297468354 0.213720317 0.371308017 379 64 2 408 3L:11254967-11255101 7 scyl FBtr0076168|FBtr0076168|FBtr0076168|FBtr0339908|FBtr0339908|FBtr0339908 11254474|11254474|11254474|11254474|11254474|11254474 11255243|11255243|11255243|11256172|11256172|11256172 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 11254915 11255103 3'utr scyl FlyBase G22383.1 AAACCAACATGAAATTCAAAGACGACAGCCCCACGAATCAATCCCCAGAATCATATTTCTGGGGCATTCGCTTTGGGGCTCGCCGGTCGACAACTCATGAATATGTGATACTGTTTAAGATGCTAAGAGTTTTTTGCCGGATGCACCAAAGTCCGGCAAAAGACGTTGATAAAATTACACATAACACAC 313 11255013 0.999641769 30 260 2304 0.834728033 1.822821645 0.336820084 0.370607029 0.587866109 313 74 5 399 3L:11254915-11255103 7 240.5 1407 FBgn0041094 3053.616667 135.47 208.0166667 0.078759067 1.775300805 1.156157359 5 5 5 0.2 dme-bantam-3p 6mer3-8 TGATCT 3L 11255249 11255254 + 3L_11255249_11255254_+ 0.557324683 0.5803746 0.568849641 0.016298741 scyl FBtr0339908 11254474 11256172 3L + 11255198 11255347 3'utr scyl FlyBase G29578.1 AATTGTATGCTATATAGTAATAAACAAAGAAACCAACAAAACAAACAAACTTGATCTTGGTAAATTTAAAATTTAACTTTAAAACTGAGAGAGATGAGGGCCTCGAACTGTGAAAGAGGTAGATGATCACACGCTCCAATTTTAGTTAGA 776 11255249 0.925336931 25 730 4868 0.950052029 1.638251483 0.043704475 0.176546392 0.335067638 776 28 20 913 3L:11255198-11255347 6 scyl FBtr0339908 11254474 11256172 TGATCT 6mer3-8 dme-bantam-3p 3L + 11255235 11255366 3'utr scyl FlyBase G22384.1 AAAACAAACAAACTTGATCTTGGTAAATTTAAAATTTAACTTTAAAACTGAGAGAGATGAGGGCCTCGAACTGTGAAAGAGGTAGATGATCACACGCTCCAATTTTAGTTAGACGCAGCTTGCTGCAATAAA 603 11255249 0.872144453 28 570 3535 0.947194719 1.573275315 0.053905391 0.354892206 0.572057206 603 26 22 861 3L:11255235-11255366 6 565.5 1408 FBgn0041094 3053.616667 135.47 208.0166667 0.185190239 4.174355946 2.718532169 0 0 0 0.2 dme-miR-1003-3p 7mer-A1 TGTGAGA 3L 11256039 11256045 + 3L_11256039_11256045_+ 0.80870238 0.791883597 0.800292988 0.011892688 scyl FBtr0339908 11254474 11256172 3L + 11256013 11256061 3'utr scyl FlyBase G29583.1 TTTATTGCGTAAAACAACAAAATAATTGTGAGAAATTTGTAACCAAAAC 25 11256038 0.698190375 5 25 143 1 1.505149978 0.25 0.16 0.34375 25 0 0 32 3L:11256013-11256061 7 scyl FBtr0339908 11254474 11256172 TGTGAGA 7mer-A1 dme-miR-1003-3p 3L + 11256020 11256062 3'utr scyl FlyBase G22389.1 CGTAAAACAACAAAATAATTGTGAGAAATTTGTAACCAAAACA 23 11256038 0.962665033 2 23 122 1 1.51851394 0.181818182 0.391304348 0.575757576 23 0 0 33 3L:11256020-11256062 7 24 1409 FBgn0041094 3053.616667 135.47 208.0166667 0.007859533 0.177160995 0.115375371 1 1 1 0.2 dme-miR-277-3p 7mer-m8 TGCATTT 3L 1141097 1141103 - 3L_1141097_1141103_- 0.615016802 0.617014499 0.616015651 0.001412587 bab2 FBtr0333271|FBtr0072639 1140427|1140427 1141967|1141967 3L - 1141083 1141124 3'utr bab2 FlyBase G33220.1 AAAGTTACGATTAGAGACTTGTGCATTTCTTAAATGTAGCTT 9 1141103 0.975095415 3 9 61 1 1 0 0.111111111 0.2 9 0 0 10 3L:1141083-1141124 7 bab2 FBtr0333271|FBtr0072639 1140427|1140427 1141967|1141967 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 1141067 1141131 3'utr bab2 FlyBase G25135.1 AAACATTAAAGTTACGATTAGAGACTTGTGCATTTCTTAAATGTAGCTTAACCCTAGAATAGCCC 11 1141104 0.982455407 6 11 84 1 1.204119983 0.0625 0.363636364 0.5625 11 0 0 16 3L:1141067-1141131 7 9 1410 FBgn0025525 40 0.97 1.503333333 0.225 9.278350515 5.986696231 0 1 0.5 0.2 dme-bantam-3p 6mer3-8 TGATCT 3L 11495244 11495249 + 3L_11495244_11495249_+ 0.708970215 0.776912189 0.742941202 0.048042249 chrb FBtr0076093|FBtr0344910 11495094|11495094 11499055|11499055 3L + 11495178 11495267 3'utr chrb FlyBase G29589.1 AACAGCAGCAATCGCAATACGAACATCTATTGGTTGTGCCTCCTTCGTCGCAATAGCCAAGATTCATGATCTTCATTATGGAATATAGAG 31 11495244 0.986331879 7 28 244 0.974358974 1.579783597 0.333333333 0.258064516 0.41025641 31 1 0 38 3L:11495178-11495267 6 chrb FBtr0076093|FBtr0344910 11495094|11495094 11499055|11499055 TGATCT 6mer3-8 dme-bantam-3p 3L + 11495223 11495294 3'utr chrb FlyBase G22393.1 CGTCGCAATAGCCAAGATTCATGATCTTCATTATGGAATATAGAGAGATGATGTTTAACCCTAGAGGCAAAC 14 11495244 0.989054931 3 13 108 0.952380952 1.301029996 0.142857143 0.285714286 0.523809524 14 1 0 20 3L:11495223-11495294 6 18.5 1411 FBgn0036165 903.39 19.18 29.98 0.02047842 0.964546403 0.617078052 0 0 0 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 11496018 11496024 + 3L_11496018_11496024_+ 0.712252047 0.671636534 0.69194429 0.028719495 chrb FBtr0076093|FBtr0076093|FBtr0076093|FBtr0344910|FBtr0344910|FBtr0344910 11495094|11495094|11495094|11495094|11495094|11495094 11499055|11499055|11499055|11499055|11499055|11499055 3L + 11495994 11496040 3'utr chrb FlyBase G29591.1 TAACAAATATAAAAACAAAGTTGATGTGATATTATATAATAATTATG 53 11496015 0.851912783 6 51 498 0.965517241 1.748188027 0.034482759 0.075471698 0.155172414 53 2 0 56 3L:11495994-11496040 7 chrb FBtr0076093|FBtr0076093|FBtr0076093|FBtr0344910|FBtr0344910|FBtr0344910 11495094|11495094|11495094|11495094|11495094|11495094 11499055|11499055|11499055|11499055|11499055|11499055 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 11495959 11496040 3'utr chrb FlyBase G22395.1 TCGATCAATCGAGGCAGAAAGAGGAAAGTTAATAATAACAAATATAAAAACAAAGTTGATGTGATATTATATAATAATTATG 43 11496015 0.989287264 8 39 372 0.933333333 1.748188027 0.05 0.372093023 0.55 43 4 0 56 3L:11495959-11496040 7 46 1412 FBgn0036165 903.39 19.18 29.98 0.050919315 2.398331595 1.534356237 3 3 3 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 3L 11496820 11496825 + 3L_11496820_11496825_+ 0.959862932 0.999188442 0.979525687 0.027807328 chrb FBtr0076093|FBtr0344910 11495094|11495094 11499055|11499055 3L + 11496805 11496841 3'utr chrb FlyBase G29592.1 AAATATAAAGTCATCTGTGTTAATAAATTTTAAAATA 9 11496818 0.827834511 2 7 76 0.923076923 1.079181246 0 0.222222222 0.461538462 9 1 0 12 3L:11496805-11496841 6 chrb FBtr0076093|FBtr0344910 11495094|11495094 11499055|11499055 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 11496806 11496830 3'utr chrb FlyBase G22396.1 AATATAAAGTCATCTGTGTTAATAA 5 11496819 0.68393326 2 5 35 1 0.84509804 0 0.4 0.571428571 5 0 0 7 3L:11496806-11496830 6 6.5 1413 FBgn0036165 903.39 19.18 29.98 0.007195121 0.338894682 0.216811207 2 1 1.5 0.2 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3L 11605486 11605491 - 3L_11605486_11605491_- 0.805731358 0.844632615 0.825181987 0.027507302 CG6091 FBtr0273305|FBtr0273306 11605434|11605434 11606103|11606103 3L - 11605468 11605511 3'utr CG6091 FlyBase G36169.1 ATTTAATTGACTACAATAAATGGTGCATATTAATCGTAATTTAT 107 11605491 0.863624801 9 105 918 0.974789916 2.064457989 0.092436975 0.093457944 0.18487395 107 3 0 116 3L:11605468-11605511 6 CG6091 FBtr0273306|FBtr0273305 11605434|11605434 11606103|11606103 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3L - 11605468 11605511 3'utr CG6091 FlyBase G27342.1 ATTTAATTGACTACAATAAATGGTGCATATTAATCGTAATTTAT 67 11605491 0.866199681 6 67 570 1 1.944482672 0.090909091 0.23880597 0.420454545 67 0 0 88 3L:11605468-11605511 6 86 1414 FBgn0036180 776.52 29.66333333 45.66333333 0.110750528 2.899202158 1.88334915 0 0 0 0.2 dme-miR-980-5p 6mer3-8 GAAAAA 3L 11629763 11629768 + 3L_11629763_11629768_+ 0.595620908 0.952445992 0.77403345 0.252313448 CG18815 FBtr0076103|FBtr0076105|FBtr0076104 11629606|11629606|11629606 11629992|11629992|11629992 3L + 11629745 11629776 3'utr CG18815 FlyBase G29615.1 ATTATGGAAATTATCACTGAAAAATCAATTCG 6 11629756 0.610569028 5 6 33 1 0.77815125 0.166666667 0 0 6 0 0 6 3L:11629745-11629776 6 CG18815 FBtr0076104|FBtr0076105|FBtr0076103 11629606|11629606|11629606 11629992|11629992|11629992 GAAAAA 6mer3-8 dme-miR-980-5p 3L + 11629738 11629783 3'utr CG18815 FlyBase G22410.1 TAGCCCAATTATGGAAATTATCACTGAAAAATCAATTCGAAAAGCA 5 11629748 0.793970976 3 5 34 1 0.903089987 0 0.4 0.625 5 0 0 8 3L:11629738-11629783 6 5 1415 FBgn0042138 741.6666667 76.60333333 116.84 0.006741573 0.065271311 0.042793564 7 15 11 0.2 dme-miR-11-3p 8mer-m1 CTGTGATG 3L 11642549 11642556 + 3L_11642549_11642556_+ 0.452845463 0.454491669 0.453668566 0.001164039 CG32091 FBtr0076106 11642492 11642902 3L + 11642497 11642597 3'utr CG32091 FlyBase G29620.1 TGAAACCAATATTCCAGATGAATCTTATCCCTAGCTTTAGGCAATGTCAATGCTGTGATGTTCGATTTTAAACAGACAGATAGATACTTCCTGTACATACT 56 11642547 0.985532041 11 55 457 0.986111111 1.851258349 0.111111111 0.196428571 0.375 56 1 0 71 3L:11642497-11642597 8 CG32091 FBtr0076106 11642492 11642902 CTGTGATG 8mer-m1 dme-miR-11-3p 3L + 11642523 11642574 3'utr CG32091 FlyBase G22414.1 ATCCCTAGCTTTAGGCAATGTCAATGCTGTGATGTTCGATTTTAAACAGACA 37 11642547 0.828858196 4 34 295 0.929824561 1.72427587 0.140350877 0.416666667 0.631578947 36 4 0 53 3L:11642523-11642574 8 41.5 1416 FBgn0052091 18 0.773333333 1.216666667 2.305555556 53.6637931 34.10958904 2 2 2 0.2 dme-miR-1008-3p 7mer-A1 GCTGTGA 3L 11650746 11650752 - 3L_11650746_11650752_- 0.317328996 0.323257564 0.32029328 0.004192153 CG32085 FBtr0076133 11650515 11650969 3L - 11650735 11650835 3'utr CG32085 FlyBase G36203.1 AAGTTCCTCGCGTGCTATGTGACTTTAACTTTCCGTCAACACTGTACTCTATCCCTTATAGTTTTAGACTTATTTTGATTTCTGCTGTGATTTGATACGGA 50 11650744 0.743598742 21 48 494 0.970588235 1.51851394 0.323529412 0.26 0.455882353 50 1 1 66 3L:11650735-11650835 7 CG32085 FBtr0076133 11650515 11650969 GCTGTGA 7mer-A1 dme-miR-1008-3p 3L - 11650731 11650772 3'utr CG32085 FlyBase G27361.1 TTAGACTTATTTTGATTTCTGCTGTGATTTGATACGGAACTT 33 11650744 0.667713719 8 31 317 1 1.716003344 0.365384615 0.393939394 0.615384615 33 0 0 52 3L:11650731-11650772 7 31 1417 FBgn0052085 2.333333333 0.09 0.133333333 13.28571429 344.4444444 232.5 -8 -8 -8 0.2 dme-miR-305-5p 7mer-A1 GTACAAA 3L 11683771 11683777 + 3L_11683771_11683777_+ 0.778114743 0.780419073 0.779266908 0.001629457 TfIIEalpha FBtr0076108 11683668 11683805 3L + 11683710 11683791 3'utr TfIIEalpha FlyBase G29637.1 GTTTCCCATCTCACGCATAGAGTCATTGTAATTTAAGTTACCCACTAGTTCGAGCGAATGTGTACAAATGAAATGCGTATAA 25 11683768 0.841836871 8 24 152 1 1.491361694 0.129032258 0.24 0.387096774 25 0 0 31 3L:11683710-11683791 7 TfIIEalpha FBtr0076108 11683668 11683805 GTACAAA 7mer-A1 dme-miR-305-5p 3L + 11683707 11683792 3'utr TfIIEalpha FlyBase G22426.1 CGAGTTTCCCATCTCACGCATAGAGTCATTGTAATTTAAGTTACCCACTAGTTCGAGCGAATGTGTACAAATGAAATGCGTATAAA 23 11683769 0.962600594 8 21 113 0.933333333 1.447158031 0.1 0.260869565 0.433333333 23 2 0 28 3L:11683707-11683792 7 17.5 1418 FBgn0015828 547.3633333 41.38 63.43333333 0.031971451 0.422909618 0.275880189 3 2 2.5 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 11688588 11688595 + 3L_11688588_11688595_+ 0.499258298 0.499254329 0.499256314 2.83E-06 Sug FBtr0273362 11688459 11688825 3L + 11688565 11688617 3'utr Sug FlyBase G29641.1 ATGCAGTGGATACGCTGGCCATTGTACTTAAACCACCATATATTTTGTAAGAT 116 11688587 0.77378824 3 110 727 0.969924812 1.809559715 0.015037594 0.129310345 0.240601504 116 3 1 129 3L:11688565-11688617 8 Sug FBtr0273362 11688459 11688825 GTACTTAA 8mer-A1 dme-miR-252-5p 3L + 11688565 11688606 3'utr Sug FlyBase G22429.1 ATGCAGTGGATACGCTGGCCATTGTACTTAAACCACCATATA 71 11688587 0.759257945 2 71 424 1 2.017033339 0 0.352112676 0.557692308 71 0 0 104 3L:11688565-11688606 8 92.5 1419 FBgn0036191 390.82 14.43333333 22.11666667 0.236681848 6.408775982 4.18236624 1 1 1 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 3L 11689339 11689344 + 3L_11689339_11689344_+ 0.724755735 0.795024053 0.759889894 0.049687262 Sug FBtr0344966|FBtr0300100 11689180|11689180 11690155|11690155 3L + 11689309 11689393 3'utr Sug FlyBase G29642.1 ACTCCCGAGCTGCATGTTGAATCGATGTACTACCTGTATTGTAATCTCGCTTTAATTAAGTAGTAACTTATCTCAGTAGCCCCAC 106 11689334 0.824744584 11 103 786 0.977941176 2.123851641 0.176470588 0.235849057 0.404411765 106 3 0 133 3L:11689309-11689393 6 Sug FBtr0344966|FBtr0300100 11689180|11689180 11690155|11690155 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 3L + 11689309 11689392 3'utr Sug FlyBase G22430.1 ACTCCCGAGCTGCATGTTGAATCGATGTACTACCTGTATTGTAATCTCGCTTTAATTAAGTAGTAACTTATCTCAGTAGCCCCA 75 11689334 0.982069065 7 75 554 1 2.086359831 0.180327869 0.426666667 0.647540984 75 0 0 122 3L:11689309-11689392 6 86 1420 FBgn0036191 390.82 14.43333333 22.11666667 0.220050151 5.958429561 3.888470234 5 5 5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 11689729 11689734 + 3L_11689729_11689734_+ 0.992075442 0.99971005 0.995892746 0.005398548 Sug FBtr0344966|FBtr0344966|FBtr0344966|FBtr0300100|FBtr0300100|FBtr0300100 11689180|11689180|11689180|11689180|11689180|11689180 11690155|11690155|11690155|11690155|11690155|11690155 3L + 11689720 11689755 3'utr Sug FlyBase G29646.1 TTTTTTTTTCTGTGAAATCTCTTAAGTGCTTACTTA 6 11689728 0.60911767 4 6 69 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3L:11689720-11689755 6 Sug FBtr0344966|FBtr0344966|FBtr0344966|FBtr0300100|FBtr0300100|FBtr0300100 11689180|11689180|11689180|11689180|11689180|11689180 11690155|11690155|11690155|11690155|11690155|11690155 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 11689722 11689749 3'utr Sug FlyBase G22433.1 TTTTTTTCTGTGAAATCTCTTAAGTGCT 5 11689742 0.645295107 3 5 43 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 3L:11689722-11689749 6 5 1421 FBgn0036191 390.82 14.43333333 22.11666667 0.012793613 0.346420323 0.226073851 1 -13 -6 0.2 dme-miR-11-3p 7mer-m1 TGTGATG 3L 11699900 11699906 - 3L_11699900_11699906_- 0.535593104 0.39941099 0.467502047 0.096295286 CG11658 FBtr0076126 11699494 11700696 3L - 11699890 11699924 3'utr CG11658 FlyBase G36216.1 GTAGCGTGGGGAAAATCATGTGATGTTGCAGGAAG 7 11699899 0.708582735 3 7 41 1 0.903089987 0.625 0.142857143 0.25 7 0 0 8 3L:11699890-11699924 7 CG11658 FBtr0076126 11699494 11700696 TGTGATG 7mer-m1 dme-miR-11-3p 3L - 11699881 11699924 3'utr CG11658 FlyBase G27373.1 GTAGCGTGGGGAAAATCATGTGATGTTGCAGGAAGCAAAGCTAG 6 11699899 0.957941575 3 6 31 1 0.77815125 1 0 0 6 0 0 6 3L:11699881-11699924 7 6.5 1422 FBgn0036196 52.87 2.63 4.06 0.122943068 2.47148289 1.600985222 -7 -7 -7 0.2 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 3L 11700022 11700029 - 3L_11700022_11700029_- 0.624940679 0.625067284 0.625003981 8.95E-05 CG11658 FBtr0076126 11699494 11700696 3L - 11700003 11700050 3'utr CG11658 FlyBase G36217.1 TTAACGTTTATCAGCTGCTTTTGGTGCTAAATCGTATTATAAGTTACA 128 11700030 0.753466129 5 124 1365 0.972413793 2.149219113 0.137931034 0.125 0.227586207 128 4 0 141 3L:11700003-11700050 8 CG11658 FBtr0076126 11699494 11700696 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 3L - 11700004 11700050 3'utr CG11658 FlyBase G27374.1 TTAACGTTTATCAGCTGCTTTTGGTGCTAAATCGTATTATAAGTTAC 74 11700030 0.735024211 8 71 748 0.972972973 2.033423755 0.126126126 0.364864865 0.576576577 74 3 0 108 3L:11700004-11700050 8 100.5 1423 FBgn0036196 52.87 2.63 4.06 1.900888973 38.21292776 24.75369458 1 1 1 0.2 dme-miR-2a-2-5p 8mer-m1 TGATGAGG 3L 11732005 11732012 + 3L_11732005_11732012_+ 0.515127962 0.597729211 0.556428587 0.058407869 CG32088 FBtr0332764 11731940 11732048 3L + 11731956 11732029 3'utr CG32088 FlyBase G29673.1 ATATTCTCATAGACAAAAGCTCTGCATACTATAAATATAGTAAATTGAATGATGAGGCTCAACATATGTCTAAT 57 11732008 0.85941128 8 53 307 0.944444444 1.355387658 0 0.192982456 0.361111111 57 2 2 68 3L:11731956-11732029 8 CG32088 FBtr0332764 11731940 11732048 TGATGAGG 8mer-m1 dme-miR-2a-2-5p 3L + 11731989 11732024 3'utr CG32088 FlyBase G22450.1 AATATAGTAAATTGAATGATGAGGCTCAACATATGT 34 11732008 0.822156221 4 33 161 1 1.73239376 0 0.411764706 0.62962963 34 0 0 54 3L:11731989-11732024 8 41 1424 FBgn0052088 164.3333333 6.503333333 9.94 0.249492901 6.304459252 4.124748491 -3 -3 -3 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3L 11786160 11786166 - 3L_11786160_11786166_- 0.521217988 0.520866085 0.521042036 0.000248831 Pi3K68D FBtr0076086|FBtr0332055 11786050|11786050 11786625|11786625 3L - 11786146 11786192 5'utr Pi3K68D FlyBase G36244.1 AACCATGTATTACGAAATGAACAAATTGTGATTTGCTGCTACATATA 60 11786166 0.982590998 4 59 452 0.987341772 1.591064607 0.215189873 0.216666667 0.405063291 60 0 1 78 3L:11786146-11786192 7 Pi3K68D FBtr0332055|FBtr0076086 11786050|11786050 11786625|11786625 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 11786151 11786181 5'utr Pi3K68D FlyBase G27394.1 ACGAAATGAACAAATTGTGATTTGCTGCTAC 35 11786160 0.573528481 5 35 263 1 1.785329835 0.245901639 0.457142857 0.68852459 35 0 0 61 3L:11786151-11786181 7 47.5 1425 FBgn0015278 1326.206667 35.56 54.69 0.035816439 1.335770529 0.868531724 0 -6 -3 0.2 dme-miR-995-5p 6mer3-8 AATTCG 3L 11786391 11786396 - 3L_11786391_11786396_- 0.601788397 0.994772227 0.798280312 0.27788151 Pi3K68D FBtr0076086|FBtr0332055 11786050|11786050 11786625|11786625 3L - 11786368 11786413 5'utr Pi3K68D FlyBase G36245.1 ATGTGCCCTCATATCGAAATTCGTGCCTTCCGCTATTGCCGGAATA 11 11786386 0.975210035 4 10 79 0.923076923 1.079181246 0 0.181818182 0.307692308 11 1 0 12 3L:11786368-11786413 6 Pi3K68D FBtr0332055|FBtr0076086 11786050|11786050 11786625|11786625 AATTCG 6mer3-8 dme-miR-995-5p 3L - 11786367 11786414 5'utr Pi3K68D FlyBase G27395.1 TATGTGCCCTCATATCGAAATTCGTGCCTTCCGCTATTGCCGGAATAA 5 11786386 0.975444574 2 5 38 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 3L:11786367-11786414 6 8 1426 FBgn0015278 1326.206667 35.56 54.69 0.006032242 0.224971879 0.146279027 -10 -10 -10 0.2 dme-miR-277-3p 7mer-m8 TGCATTT 3L 11817112 11817118 - 3L_11817112_11817118_- 0.382439469 0.373886538 0.378163004 0.006047884 CG5946 FBtr0302136|FBtr0076078|FBtr0076079|FBtr0301135 11816981|11816693|11816981|11816981 11817143|11817143|11817143|11818073 3L - 11817099 11817141 3'utr CG5946 FlyBase G36256.1 TGATGGACATTATGGGACGAAATTGCATTTTCGTTGTGTTATA 9 11817119 0.893800346 2 9 84 1 0.954242509 0.333333333 0 0 9 0 0 9 3L:11817099-11817141 7 CG5946 FBtr0302136|FBtr0301135|FBtr0076078|FBtr0076079 11816981|11816981|11816693|11816981 11817143|11818073|11817143|11817143 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 11817082 11817131 3'utr CG5946 FlyBase G27399.1 TATGGGACGAAATTGCATTTTCGTTGTGTTATATTCCTCTTTTTTTATCT 6 11817119 0.991119524 2 5 61 0.7 0.84509804 0 0.5 0.7 6 3 0 7 3L:11817082-11817131 7 7 1427 FBgn0036211 623.3566667 60.22666667 92.04666667 0.011229526 0.116227585 0.076048381 1 1 1 0.2 dme-miR-965-3p 8mer-A1 TACGCTTA 3L 11826959 11826966 - 3L_11826959_11826966_- 0.62522357 0.625240933 0.625232251 1.22E-05 CycA FBtr0304650 11826717 11827651 3L - 11826842 11827051 3'utr CycA FlyBase G36271.1 TAAAAAACTCACACTGATCGTGCTCAGAACGGCAGGCAGCCGTGGAATGTTGCTAAACTCTTGTTCTTGTAATCTTGTAATCTTATACGCTTACTAAATGTTTACTAAACTTAGTCTAGACCATCTTGCGACCACATATGTAGCTAGAATAGAGCGCTGCCGAAATGCGTACAGCCAGATGATGGGTCTTACTTTACACTTAGGTTTATG 90 11826967 0.953024251 28 82 708 0.91509434 1.384711743 0.150943396 0.166666667 0.29245283 90 6 3 97 3L:11826842-11827051 8 CycA FBtr0304650 11826717 11827651 TACGCTTA 8mer-A1 dme-miR-965-3p 3L - 11826893 11827009 3'utr CycA FlyBase G27411.1 TGGAATGTTGCTAAACTCTTGTTCTTGTAATCTTGTAATCTTATACGCTTACTAAATGTTTACTAAACTTAGTCTAGACCATCTTGCGACCACATATGTAGCTAGAATAGAGCGCTG 55 11826967 0.849991589 14 47 549 0.845238095 1.374137094 0.154761905 0.436363636 0.630952381 55 11 2 71 3L:11826893-11827009 8 43 1428 FBgn0000404 2869.163333 125.9133333 194.37 0.014986947 0.341504739 0.221227556 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 11827114 11827119 - 3L_11827114_11827119_- 0.999897913 0.998942175 0.999420044 0.000675782 CycA FBtr0076075|FBtr0076075|FBtr0076075|FBtr0304650|FBtr0304650|FBtr0304650 11827081|11827081|11827081|11826717|11826717|11826717 11827651|11827651|11827651|11827651|11827651|11827651 3L - 11827097 11827140 3'utr CycA FlyBase G36272.1 ACTATTTACTCCGTAAATGTTCTGTGAACTCCAAAACAAATATA 26 11827120 0.973508664 6 24 185 0.944444444 1.230448921 0 0.230769231 0.444444444 26 1 1 34 3L:11827097-11827140 6 CycA FBtr0076075|FBtr0076075|FBtr0076075|FBtr0304650|FBtr0304650|FBtr0304650 11827081|11827081|11827081|11826717|11826717|11826717 11827651|11827651|11827651|11827651|11827651|11827651 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 11827099 11827140 3'utr CycA FlyBase G27413.1 ACTATTTACTCCGTAAATGTTCTGTGAACTCCAAAACAAATA 27 11827120 0.804497104 7 26 192 0.951219512 1.591064607 0.048780488 0.37037037 0.585365854 27 2 0 39 3L:11827099-11827140 6 25.5 1429 FBgn0000404 2869.163333 125.9133333 194.37 0.008887608 0.202520252 0.131193085 1 1 1 0.2 dme-miR-79-3p 7mer-A1 AGCTTTA 3L 11993631 11993637 - 3L_11993631_11993637_- 0.642709168 0.660816237 0.651762702 0.012803582 Grip163 FBtr0076061 11993272 11993752 3L - 11993623 11993685 3'utr Grip163 FlyBase G36299.1 TATGCATGCATGGCGTCTCCTAAATGTAAAGCTTCGGTGAAGAAAATCAGCTTTAAAGGCATT 19 11993639 0.951815006 5 18 106 0.954545455 1.021189299 0.045454545 0.105263158 0.227272727 19 0 1 21 3L:11993623-11993685 7 Grip163 FBtr0076061 11993272 11993752 AGCTTTA 7mer-A1 dme-miR-79-3p 3L - 11993616 11993685 3'utr Grip163 FlyBase G27430.1 TATGCATGCATGGCGTCTCCTAAATGTAAAGCTTCGGTGAAGAAAATCAGCTTTAAAGGCATTTATTTCT 16 11993639 0.967071286 4 15 86 0.947368421 1.255272505 0.210526316 0.125 0.263157895 16 1 0 18 3L:11993616-11993685 7 13 1430 FBgn0026432 421 10.95666667 16.75333333 0.03087886 1.186492242 0.775964982 2 2 2 0.2 dme-miR-31a-5p 8mer-A1 TCTTGCCA 3L 11993719 11993726 - 3L_11993719_11993726_- 0.435125437 0.439029309 0.437077373 0.002760474 Grip163 FBtr0076061 11993272 11993752 3L - 11993699 11993875 stop_codon Grip163 FlyBase G36300.1 AAGGCGGCCGCTTCTGGTTACCAGGAGGAAATCGGTGACCTGATTTGTATTATTAACTTTAACCACTATTACAAGGTATCTGGGAACCATACTGGTTCCTCAATGGAGGACAAAAAGTGCTAGCCAATAATTGTTAGATAGGGAATTTATCTTGCCATTAAGCTGAGCTTAGAACAT 70 11993718 0.949236192 14 68 606 0.976190476 1.913813852 0.154761905 0.171428571 0.30952381 70 2 0 82 3L:11993699-11993875 8 Grip163 FBtr0076061 11993272 11993752 TCTTGCCA 8mer-A1 dme-miR-31a-5p 3L - 11993701 11993853 stop_codon Grip163 FlyBase G27431.1 AGGAGGAAATCGGTGACCTGATTTGTATTATTAACTTTAACCACTATTACAAGGTATCTGGGAACCATACTGGTTCCTCAATGGAGGACAAAAAGTGCTAGCCAATAATTGTTAGATAGGGAATTTATCTTGCCATTAAGCTGAGCTTAGAAC 43 11993718 0.895317004 12 42 352 0.958333333 1.236789099 0.097222222 0.441860465 0.666666667 43 0 3 69 3L:11993701-11993853 8 22 1431 FBgn0026432 421 10.95666667 16.75333333 0.052256532 2.007909948 1.313171508 -8 -8 -8 0.2 dme-miR-305-5p 6mer2-7 GTACAA 3L 12121859 12121864 - 3L_12121859_12121864_- 0.562502387 0.544157533 0.55332996 0.012971803 yps FBtr0305992|FBtr0076027 12121272|12121678 12122663|12122106 3L - 12121827 12121890 3'utr yps FlyBase G36314.1 TAGTTTCGTAGGGCAGAGAATCAATTGTACAACTCATACCACAACAAAACTAACATCCTCAAAA 31 12121866 0.964967945 3 31 162 1 1.556302501 0.361111111 0.161290323 0.277777778 31 0 0 36 3L:12121827-12121890 6 yps FBtr0305992|FBtr0076027 12121272|12121678 12122663|12122106 GTACAA 6mer2-7 dme-miR-305-5p 3L - 12121846 12121884 3'utr yps FlyBase G27441.1 CGTAGGGCAGAGAATCAATTGTACAACTCATACCACAAC 11 12121866 0.867847302 2 9 45 0.941176471 1.204119983 0.411764706 0.363636364 0.588235294 11 1 0 16 3L:12121846-12121884 6 19.5 1432 FBgn0022959 5324.54 265.4 408.5666667 0.003662288 0.073474002 0.047727829 2 2 2 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 3L 12143112 12143119 + 3L_12143112_12143119_+ 0.643267127 0.643214973 0.64324105 3.68E-05 RhoGAP68F FBtr0334092|FBtr0334091|FBtr0075997|FBtr0334093 12142827|12142827|12142827|12142827 12143380|12143380|12143380|12143380 3L + 12143062 12143135 3'utr RhoGAP68F FlyBase G29720.1 CCGAAAATCACAATTATTTACCCCCAACAAGCGCTTAATACGATTGATTTACCAAAGAAATTTGCTCGTGTTCG 31 12143111 0.974028894 8 30 186 0.974358974 1.278753601 0.128205128 0.225806452 0.384615385 31 0 1 38 3L:12143062-12143135 8 RhoGAP68F FBtr0334093|FBtr0075997|FBtr0334091|FBtr0334092 12142827|12142827|12142827|12142827 12143380|12143380|12143380|12143380 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 12143083 12143131 3'utr RhoGAP68F FlyBase G22497.1 CCCCAACAAGCGCTTAATACGATTGATTTACCAAAGAAATTTGCTCGTG 22 12143111 0.979592546 4 20 133 0.903225806 1.146128036 0.258064516 0.272727273 0.483870968 22 2 1 28 3L:12143083-12143131 8 23.5 1433 FBgn0036257 644.8233333 34.92 53.27666667 0.036444091 0.672966781 0.441093662 1 1 1 0.2 dme-miR-1006-3p 6mer2-7 GAATTT 3L 12143308 12143313 + 3L_12143308_12143313_+ 0.999994974 0.999507212 0.999751093 0.000344927 RhoGAP68F FBtr0334092|FBtr0334091|FBtr0075997|FBtr0334093 12142827|12142827|12142827|12142827 12143380|12143380|12143380|12143380 3L + 12143266 12143329 3'utr RhoGAP68F FlyBase G29723.1 AGTGGAGTTGTGGCGAACTCAAAAATCGTACTGTGTAGTCTTGAATTTCCTTATAGTCATACAA 14 12143311 0.993605789 7 10 119 0.764705882 1.113943352 0.176470588 0.142857143 0.294117647 14 4 0 13 3L:12143266-12143329 6 RhoGAP68F FBtr0334093|FBtr0075997|FBtr0334091|FBtr0334092 12142827|12142827|12142827|12142827 12143380|12143380|12143380|12143380 GAATTT 6mer2-7 dme-miR-1006-3p 3L + 12143287 12143331 3'utr RhoGAP68F FlyBase G22500.1 AAAATCGTACTGTGTAGTCTTGAATTTCCTTATAGTCATACAAAC 7 12143316 0.652171008 5 6 64 0.888888889 0.903089987 0 0.285714286 0.444444444 7 1 0 8 3L:12143287-12143331 6 8 1434 FBgn0036257 644.8233333 34.92 53.27666667 0.012406499 0.229095074 0.150159545 -3 -8 -5.5 0.2 dme-miR-34-5p 8mer-A1 CACTGCCA 3L 12156412 12156419 + 3L_12156412_12156419_+ 0.678332074 0.678099635 0.678215855 0.000164402 Nrx-IV FBtr0075999|FBtr0075998 12156240|12156240 12156990|12156990 3L + 12156394 12156468 3'utr Nrx-IV FlyBase G29736.1 AGAAAATACTTTTCCATGCACTGCCAATTGTTTTGCGCAAGTAAATGCTAAGATTTGATTTATAATTGGTTGGCT 20 12156410 0.985961967 6 20 165 1 1.397940009 0.32 0.25 0.4 20 0 0 25 3L:12156394-12156468 8 Nrx-IV FBtr0075999|FBtr0075998 12156240|12156240 12156990|12156990 CACTGCCA 8mer-A1 dme-miR-34-5p 3L + 12156339 12156426 3'utr Nrx-IV FlyBase G22508.1 GAGAACGAAGTGAAAATCAAATAGACACGGAAAAGGCTCACCACGCATAACAGACAGAAAATACTTTTCCATGCACTGCCAATTGTTT 18 12156410 0.979549987 4 18 123 1 1.447158031 0.357142857 0.333333333 0.571428571 18 0 0 28 3L:12156339-12156426 8 16.5 1435 FBgn0013997 1120.423333 27.23333333 41.64333333 0.014726577 0.605875153 0.396221884 2 2 2 0.2 dme-miR-184-3p 7mer-A1 CCGTCCA 3L 12156548 12156554 + 3L_12156548_12156554_+ 0.798309836 0.802143358 0.800226597 0.002710765 Nrx-IV FBtr0075999|FBtr0075998 12156240|12156240 12156990|12156990 3L + 12156491 12156571 3'utr Nrx-IV FlyBase G29737.1 TTTTTAGTCTTTGGTTCTGTCTGACGGCATTATTGAAATTTCTTCTATCACAGAATACCGTCCATTTTTAGTTAATTTTAT 469 12156546 0.960489492 18 449 4593 0.956603774 1.625826713 0.020754717 0.1108742 0.213207547 469 12 11 507 3L:12156491-12156571 7 Nrx-IV FBtr0075999|FBtr0075998 12156240|12156240 12156990|12156990 CCGTCCA 7mer-A1 dme-miR-184-3p 3L + 12156496 12156571 3'utr Nrx-IV FlyBase G22509.1 AGTCTTTGGTTCTGTCTGACGGCATTATTGAAATTTCTTCTATCACAGAATACCGTCCATTTTTAGTTAATTTTAT 187 12156546 0.951413117 15 173 1622 0.91634981 1.302835797 0.02661597 0.320855615 0.517110266 187 11 11 241 3L:12156496-12156571 7 316.5 1436 FBgn0013997 1120.423333 27.23333333 41.64333333 0.282482514 11.62178703 7.600256143 2 2 2 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 3L 12156856 12156861 + 3L_12156856_12156861_+ 0.989747664 0.946409929 0.968078797 0.030644452 Nrx-IV FBtr0075999|FBtr0075998 12156240|12156240 12156990|12156990 3L + 12156824 12156884 3'utr Nrx-IV FlyBase G29739.1 ATTGTATTTTTGGAAAATGCATTTTGAACGTCTTGACTTGAAATTTTCAAATATACATTAG 17 12156856 0.832425744 7 17 137 1 1.342422681 0.090909091 0.235294118 0.409090909 17 0 0 22 3L:12156824-12156884 6 Nrx-IV FBtr0075999|FBtr0075998 12156240|12156240 12156990|12156990 TTGACT 6mer3-8 dme-miR-1012-3p 3L + 12156844 12156876 3'utr Nrx-IV FlyBase G22511.1 ATTTTGAACGTCTTGACTTGAAATTTTCAAATA 17 12156856 0.767644613 2 16 129 0.961538462 1.096910013 0 0.352941176 0.576923077 17 0 1 25 3L:12156844-12156876 6 15.5 1437 FBgn0013997 1120.423333 27.23333333 41.64333333 0.013834057 0.569155447 0.372208437 0 0 0 0.2 dme-miR-8-3p 7mer-m8 CAGTATT 3L 12269248 12269254 + 3L_12269248_12269254_+ 0.66154037 0.661615216 0.661577793 5.29E-05 CG32100 FBtr0076006 12269199 12269803 3L + 12269231 12269286 3'utr CG32100 FlyBase G29741.1 TATATCGTTAGTGCACTCAGTATTTTCTGTTTGTTATGATTAGCTATAGATTCCTT 11 12269247 0.89090119 6 11 138 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 3L:12269231-12269286 7 CG32100 FBtr0076006 12269199 12269803 CAGTATT 7mer-m8 dme-miR-8-3p 3L + 12269231 12269276 3'utr CG32100 FlyBase G22512.1 TATATCGTTAGTGCACTCAGTATTTTCTGTTTGTTATGATTAGCTA 8 12269255 0.991115255 5 8 88 1 1.113943352 0 0.5 0.692307692 8 0 0 13 3L:12269231-12269276 7 8.5 1438 FBgn0052100 96.87 5.46 8.436666667 0.087746464 1.556776557 1.007506914 1 -7 -3 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3L 12269620 12269626 + 3L_12269620_12269626_+ 0.517433448 0.521207818 0.519320633 0.002668904 CG32100 FBtr0076006 12269199 12269803 3L + 12269578 12269705 3'utr CG32100 FlyBase G29742.1 AGAGCCGGATCCAATTGTTTATGTACTTAATGCATTTGATTTTGTGATTTTAATCTTTTCGTAAGACTCGAAACTGGTACCAATTTAGCAAGTAAGCTCCAGCCAGTGTTCAATGCTCACCGTAGCCC 16 12269599 0.99013347 9 16 160 1 1.342422681 0.090909091 0.25 0.454545455 16 0 0 22 3L:12269578-12269705 7 CG32100 FBtr0076006 12269199 12269803 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 12269590 12269629 3'utr CG32100 FlyBase G22513.1 AATTGTTTATGTACTTAATGCATTTGATTTTGTGATTTTA 5 12269627 0.993685563 3 4 47 0.692307692 0.954242509 0.307692308 0.6 0.846153846 5 4 0 9 3L:12269590-12269629 7 5 1439 FBgn0052100 96.87 5.46 8.436666667 0.051615567 0.915750916 0.592651126 21 -7 7 0.2 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 3L 12270036 12270041 - 3L_12270036_12270041_- 0.973477965 0.961209909 0.967343937 0.008674857 Pbgs FBtr0076011|FBtr0076011|FBtr0333357|FBtr0333357 12269966|12269966|12269450|12269450 12270291|12270291|12270291|12270291 3L - 12270031 12270082 3'utr Pbgs FlyBase G36359.1 ATTTTACCGATTAAGTGGCTTAAATAAGACTCAAAGGCTTTTACTTACATCA 59 12270042 0.802408982 8 55 364 0.943661972 1.348953548 0.056338028 0.203389831 0.338028169 59 2 2 67 3L:12270031-12270082 6 Pbgs FBtr0076011|FBtr0076011|FBtr0333357|FBtr0333357 12269966|12269966|12269450|12269450 12270291|12270291|12270291|12270291 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 3L - 12270029 12270082 3'utr Pbgs FlyBase G27466.1 ATTTTACCGATTAAGTGGCTTAAATAAGACTCAAAGGCTTTTACTTACATCAAT 28 12270042 0.971497265 7 27 162 0.971428571 1.230448921 0.171428571 0.142857143 0.314285714 28 0 1 34 3L:12270029-12270082 6 23.5 1440 FBgn0036271 224.0566667 17.76333333 27 0.104884181 1.322949897 0.87037037 1 1 1 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3L 12281123 12281129 + 3L_12281123_12281129_+ 0.823024142 0.820979827 0.822001985 0.001445538 CG10426 FBtr0076007|FBtr0333356 12281032|12281032 12281476|12281476 3L + 12281086 12281153 3'utr CG10426 FlyBase G29745.1 TGAAATCTATTTAGTCATTTACTCGAATCTCAAAGTGCTAGTCAAAGCTTTCCTACGGTTGTGCGACG 30 12281103 0.896095075 9 24 219 0.777777778 0.970036777 0.305555556 0.2 0.333333333 30 6 2 28 3L:12281086-12281153 7 CG10426 FBtr0333356|FBtr0076007 12281032|12281032 12281476|12281476 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L + 12281085 12281156 3'utr CG10426 FlyBase G22514.1 TTGAAATCTATTTAGTCATTTACTCGAATCTCAAAGTGCTAGTCAAAGCTTTCCTACGGTTGTGCGACGCCT 24 12281121 0.960811269 12 22 166 0.971428571 1.230448921 0.085714286 0.333333333 0.542857143 24 0 1 34 3L:12281085-12281156 7 18 1441 FBgn0036273 103.6666667 4.046666667 6.22 0.173633441 4.448105437 2.893890675 20 2 11 0.2 dme-miR-304-5p 8mer-A1 TGAGATTA 3L 12281298 12281305 + 3L_12281298_12281305_+ 0.580449818 0.572895377 0.576672598 0.005341767 CG10426 FBtr0076007|FBtr0333356 12281032|12281032 12281476|12281476 3L + 12281222 12281377 3'utr CG10426 FlyBase G29746.1 TACTTACCCTGCAATGCTGCGGTAGATCTTAGGCGCTGCCTTTCGCCTCGAGGCCTTAGTCGTAATACGTTCCTTATGAGATTATCTAATACATACTCGTGCAACAATTCTGTACCTCTACTCTGAAGCACAAGCTTAGTTCGTAGATAAACTAAA 70 12281298 0.865425051 18 69 510 0.977272727 1.934498451 0.113636364 0.214285714 0.375 70 2 0 86 3L:12281222-12281377 8 CG10426 FBtr0333356|FBtr0076007 12281032|12281032 12281476|12281476 TGAGATTA 8mer-A1 dme-miR-304-5p 3L + 12281227 12281310 3'utr CG10426 FlyBase G22515.1 ACCCTGCAATGCTGCGGTAGATCTTAGGCGCTGCCTTTCGCCTCGAGGCCTTAGTCGTAATACGTTCCTTATGAGATTATCTAA 22 12281297 0.988781921 11 20 183 0.935483871 1.462397998 0.129032258 0.318181818 0.516129032 22 2 0 29 3L:12281227-12281310 8 16.5 1442 FBgn0036273 103.6666667 4.046666667 6.22 0.159163987 4.077429984 2.652733119 0 1 0.5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 12281333 12281338 + 3L_12281333_12281338_+ 0.994885136 0.983056851 0.988970994 0.0083638 CG10426 FBtr0076007|FBtr0333356 12281032|12281032 12281476|12281476 3L + 12281222 12281377 3'utr CG10426 FlyBase G29746.1 TACTTACCCTGCAATGCTGCGGTAGATCTTAGGCGCTGCCTTTCGCCTCGAGGCCTTAGTCGTAATACGTTCCTTATGAGATTATCTAATACATACTCGTGCAACAATTCTGTACCTCTACTCTGAAGCACAAGCTTAGTTCGTAGATAAACTAAA 70 12281332 0.865425051 18 69 510 0.977272727 1.934498451 0.113636364 0.214285714 0.375 70 2 0 86 3L:12281222-12281377 6 CG10426 FBtr0333356|FBtr0076007 12281032|12281032 12281476|12281476 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 12281314 12281359 3'utr CG10426 FlyBase G22516.1 ATACTCGTGCAACAATTCTGTACCTCTACTCTGAAGCACAAGCTTA 21 12281332 0.97958391 5 20 141 0.933333333 0.970036777 0 0.333333333 0.533333333 21 0 2 28 3L:12281314-12281359 6 28.5 1443 FBgn0036273 103.6666667 4.046666667 6.22 0.274919614 7.042833608 4.581993569 1 1 1 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 3L 12402673 12402678 - 3L_12402673_12402678_- 0.703174635 0.72314767 0.713161152 0.014123114 CG32103 FBtr0332090 12402293 12404054 3L - 12402656 12402691 3'utr CG32103 FlyBase G36373.1 ACACTTGAATCATTTGACTTGATCATTAAAAATCAC 13 12402678 0.971147033 5 13 102 1 1.255272505 0 0.230769231 0.444444444 13 0 0 18 3L:12402656-12402691 6 CG32103 FBtr0332090 12402293 12404054 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 12402653 12402689 3'utr CG32103 FlyBase G27476.1 ACTTGAATCATTTGACTTGATCATTAAAAATCACCCA 12 12402678 0.978657028 4 11 97 0.947368421 1.255272505 0.052631579 0.5 0.684210526 12 1 0 18 3L:12402653-12402689 6 12.5 1444 FBgn0052103 1942.393333 66.43 101.62 0.00643536 0.188167996 0.123007282 0 0 0 0.2 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 12402929 12402934 - 3L_12402929_12402934_- 0.993886673 0.996348664 0.995117669 0.001740897 CG32103 FBtr0332090 12402293 12404054 3L - 12402897 12402978 3'utr CG32103 FlyBase G36375.1 AACCAACACAATACCCATACACCATGTAATTTATTTGATATATCATGTGAATCTGAAGCCGATCGCAAAACCGACCAATCAT 48 12402931 0.999981988 12 42 286 0.883333333 1.122215878 0.166666667 0.208333333 0.366666667 48 4 3 53 3L:12402897-12402978 6 CG32103 FBtr0332090 12402293 12404054 ATGTGA 6mer3-8 dme-miR-1003-3p 3L - 12402911 12402960 3'utr CG32103 FlyBase G27479.1 ACACCATGTAATTTATTTGATATATCATGTGAATCTGAAGCCGATCGCAA 24 12402931 0.739951906 8 22 159 0.896551724 1.414973348 0.275862069 0.208333333 0.344827586 24 3 0 26 3L:12402911-12402960 6 29.5 1445 FBgn0052103 1942.393333 66.43 101.62 0.015187449 0.444076471 0.290297186 -3 -3 -3 0.2 dme-miR-2a-2-5p 6mer3-8 TGATGA 3L 12403209 12403214 - 3L_12403209_12403214_- 0.810970597 0.844976188 0.827973393 0.02404559 CG32103 FBtr0332090 12402293 12404054 3L - 12403051 12403451 3'utr CG32103 FlyBase G36377.1 AGTTCGTCCCATCCGACTGCTTTCGAAAGCGAATTAGCTTAGCATAAATCAGAGTGAGCCAGGCAGGCGGATTGCGAGTGGGAATCAGGTATCTGAAATCGAGGGATAGACGGATGGATACGGATACTCGGCAGCGTTTAAGCTTAAACACAAAAGACATTAAAACTACGATGTACTCGTTTTTGCTTAGATTAATCGATTACACAAAAAAATGAGAAACACTTAACGTTTACAATGTGATGATAATAGTTTATAATATACACATATAAATACATATAACTATACCTATACCTACTAAAATACCGACTTGTAAGCTTCAAATAGCTGTCGCAGTCTCTTGAGCAAGTTCGGCGGCGAGGCTGAAGAAAACTTTGTAGCATTTTATTTGTTAAGTTTAGTAA 255 12403221 0.887726428 61 235 1896 0.920792079 1.600506163 0.191419142 0.164705882 0.297029703 255 18 6 279 3L:12403051-12403451 6 CG32103 FBtr0332090 12402293 12404054 TGATGA 6mer3-8 dme-miR-2a-2-5p 3L - 12403062 12403240 3'utr CG32103 FlyBase G27481.1 ATGAGAAACACTTAACGTTTACAATGTGATGATAATAGTTTATAATATACACATATAAATACATATAACTATACCTATACCTACTAAAATACCGACTTGTAAGCTTCAAATAGCTGTCGCAGTCTCTTGAGCAAGTTCGGCGGCGAGGCTGAAGAAAACTTTGTAGCATTTTATTTGTT 145 12403208 0.987390968 33 134 1198 0.942477876 1.851258349 0.172566372 0.413793103 0.623893805 145 11 2 213 3L:12403062-12403240 6 102 1446 FBgn0052103 1942.393333 66.43 101.62 0.052512536 1.535450851 1.003739421 7 -6 0.5 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 12403695 12403700 - 3L_12403695_12403700_- 0.614957766 0.964157851 0.789557808 0.246921759 CG32103 FBtr0075982|FBtr0332090|FBtr0075983|FBtr0332089 12403503|12402293|12403503|12403503 12404054|12404054|12404054|12404054 3L - 12403625 12403745 3'utr CG32103 FlyBase G36379.1 TCTTAAAATATAAAATAAGTGATACTATGGCTAATTTATTTATAAACCAAACGCAAAGGAGAAAATGCAACATTTTGCCGTGTGCTAATCCCAAAACATTTCTTAGGCCAACAATCCTGCG 63 12403730 0.83280044 18 57 436 0.888888889 1.329058719 0.125 0.126984127 0.236111111 63 6 2 64 3L:12403625-12403745 6 CG32103 FBtr0332089|FBtr0075983|FBtr0332090|FBtr0075982 12403503|12403503|12402293|12403503 12404054|12404054|12404054|12404054 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 12403696 12403752 3'utr CG32103 FlyBase G27484.2 GTTATTTTCTTAAAATATAAAATAAGTGATACTATGGCTAATTTATTTATAAACCAA 31 12403730 0.859749123 7 29 238 0.947368421 1.556302501 0.026315789 0.225806452 0.368421053 31 2 0 36 3L:12403696-12403752 4 5 1447 FBgn0052103 1942.393333 66.43 101.62 0.002574144 0.075267199 0.049202913 30 30 30 0.2 dme-miR-1008-3p 6mer2-7 GCTGTG 3L 12403920 12403925 - 3L_12403920_12403925_- 0.999999118 0.999845035 0.999922076 0.000108965 CG32103 FBtr0075982|FBtr0332090|FBtr0075983|FBtr0332089 12403503|12402293|12403503|12403503 12404054|12404054|12404054|12404054 3L - 12403828 12403946 3'utr CG32103 FlyBase G36380.2 GCGGCTGGTGATCCGGCTGACGCTGTGCTCCATTTTGTATAGTAGTAGCGTTAGGTTAAGTCGGCTCGGTGGTCGCCACTCGCTCTCTGCCGCAATGAGACAGTCTCGTGCTGCTTCTT 70 12403923 0.898326283 26 67 440 0.963414634 1.897627091 0.170731707 0.142857143 0.268292683 70 3 0 79 3L:12403828-12403946 6 CG32103 FBtr0332089|FBtr0075983|FBtr0332090|FBtr0075982 12403503|12403503|12402293|12403503 12404054|12404054|12404054|12404054 GCTGTG 6mer2-7 dme-miR-1008-3p 3L - 12403783 12403948 3'utr CG32103 FlyBase G27485.1 GTGCGGCTGGTGATCCGGCTGACGCTGTGCTCCATTTTGTATAGTAGTAGCGTTAGGTTAAGTCGGCTCGGTGGTCGCCACTCGCTCTCTGCCGCAATGAGACAGTCTCGTGCTGCTTCTTTCCTTAAGTGTAAAGCAGGCCTCTTCCACGTTCTGGGTTATCCGT 100 12403923 0.885428329 29 92 636 0.909722222 1.640150041 0.201388889 0.32 0.527777778 100 11 2 131 3L:12403783-12403948 6 25.5 1448 FBgn0052103 1942.393333 66.43 101.62 0.013128134 0.383862713 0.250934855 -2 -2 -2 0.2 dme-miR-999-3p 6mer2-7 GTTAAC 3L 12404020 12404025 - 3L_12404020_12404025_- 0.999990808 0.997760007 0.998875407 0.001577414 CG32103 FBtr0075982|FBtr0332090|FBtr0075983|FBtr0332089 12403503|12402293|12403503|12403503 12404054|12404054|12404054|12404054 3L - 12403953 12404085 stop_codon CG32103 FlyBase G36381.1 GAGTCGCGCCCTGGGCATTAAGATGTCGTGAGATGTCTGTCTTAATCTCGTTCCAATCAGGTTAACTCGGCTCGGCCCGGCCACCTCGGCTCTGCGGCCCCGCTCTGCAGGGCGGATCGGGCTGCGGCCGGGA 34 12404024 0.969390692 16 32 179 0.955555556 1.633468456 0.2 0.235294118 0.422222222 34 2 0 43 3L:12403953-12404085 6 CG32103 FBtr0332089|FBtr0075983|FBtr0332090|FBtr0075982 12403503|12403503|12402293|12403503 12404054|12404054|12404054|12404054 GTTAAC 6mer2-7 dme-miR-999-3p 3L - 12403953 12404147 stop_codon CG32103 FlyBase G27486.1 ACGCCAAACTTCCTCAAGGTCCTGCCGGCGGTGTCCATCAGCTACGTGGTGTACGAGTATACGAGTCGCGCCCTGGGCATTAAGATGTCGTGAGATGTCTGTCTTAATCTCGTTCCAATCAGGTTAACTCGGCTCGGCCCGGCCACCTCGGCTCTGCGGCCCCGCTCTGCAGGGCGGATCGGGCTGCGGCCGGGA 40 12404024 0.958947606 19 31 177 0.830508475 1.389166084 0.152542373 0.35 0.559322034 40 9 1 49 3L:12403953-12404147 6 15 1449 FBgn0052103 1942.393333 66.43 101.62 0.007722432 0.225801596 0.147608738 -1 -1 -1 0.2 dme-miR-8-3p 6mer3-8 CAGTAT 3L 1241811 1241816 - 3L_1241811_1241816_- 0.984351546 0.590050923 0.787201235 0.278812628 Klp61F FBtr0072733 1241566 1241967 3L - 1241773 1241918 3'utr Klp61F FlyBase G33227.1 TTAGTGGATTTCGGATCGCTGTGTTTGTTTGGCTCTTCTGGATATTCATTTTATCTGTATATCAATCTTTGGAATTTCGTACATTTATTATTTAAATAAACTCAGTATGCTATGTAAAGTTAAGGAAATCTTTAGTTCAAGTGCAG 16 1241813 0.989109591 14 15 147 0.909090909 1.301029996 0.227272727 0.25 0.454545455 16 2 0 20 3L:1241773-1241918 6 Klp61F FBtr0072733 1241566 1241967 CAGTAT 6mer3-8 dme-miR-8-3p 3L - 1241765 1241867 3'utr Klp61F FlyBase G25139.1 TATCTGTATATCAATCTTTGGAATTTCGTACATTTATTATTTAAATAAACTCAGTATGCTATGTAAAGTTAAGGAAATCTTTAGTTCAAGTGCAGGTTTAAGA 17 1241813 0.990546451 11 16 152 0.868421053 1.51851394 0.157894737 0.647058824 0.842105263 17 5 0 33 3L:1241765-1241867 6 7 1450 FBgn0004378 1433.893333 44.94333333 69.04666667 0.004881814 0.155751687 0.101380709 -3 -3 -3 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 12492038 12492043 - 3L_12492038_12492043_- 0.976515668 0.999999999 0.988257833 0.016605908 CG10657 FBtr0075975 12491828 12492142 3L - 12492026 12492067 3'utr CG10657 FlyBase G36406.1 AAGACGCGCGGGCATGCACACTTCGTACCTATTTAAAAGCAT 14 12492036 0.981318448 3 12 91 0.857142857 1.079181246 0.142857143 0 0 14 2 0 12 3L:12492026-12492067 6 CG10657 FBtr0075975 12491828 12492142 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L - 12491978 12492068 3'utr CG10657 FlyBase G27511.1 CAAGACGCGCGGGCATGCACACTTCGTACCTATTTAAAAGCATCACCACTAAGTTGTATAACTACGGTCTCGCGGGAACTGTGACTCCCTC 7 12492046 0.977150911 6 7 46 1 1.041392685 0.545454545 0.428571429 0.636363636 7 0 0 11 3L:12491978-12492068 6 9 1451 FBgn0036289 3.616666667 0.283333333 0.423333333 2.488479263 31.76470588 21.25984252 -7 3 -2 0.2 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 1250109 1250115 + 3L_1250109_1250115_+ 0.823040535 0.822935601 0.822988068 7.42E-05 Sac1 FBtr0303217|FBtr0072652 1250068|1250068 1250451|1250451 3L + 1250076 1250142 3'utr Sac1 FlyBase G26994.1 TGTCGTCTAGCAGAGTCACTGGGAACTACCTCTGCAGCTAAACTGTCCCATTGCTCCGAGAAAGAAC 16 1250108 0.963364916 5 15 80 0.941176471 1.204119983 0.294117647 0.0625 0.117647059 16 1 0 16 3L:1250076-1250142 7 Sac1 FBtr0303217|FBtr0072652 1250068|1250068 1250451|1250451 GCAGCTA 7mer-A1 dme-miR-980-3p 3L + 1250077 1250153 3'utr Sac1 FlyBase G20435.1 GTCGTCTAGCAGAGTCACTGGGAACTACCTCTGCAGCTAAACTGTCCCATTGCTCCGAGAAAGAACAATTGTAAACC 13 1250107 0.969472889 6 12 71 0.944444444 1.230448921 0.166666667 0.307692308 0.5 13 1 0 17 3L:1250077-1250153 7 12 1452 FBgn0035195 492.1933333 25.24666667 38.54333333 0.024380663 0.475310272 0.311337888 1 2 1.5 0.2 dme-miR-988-3p 6mer3-8 ACAAGG 3L 12502559 12502564 + 3L_12502559_12502564_+ 0.695758832 0.999961582 0.847860207 0.215103863 CG10681 FBtr0075957|FBtr0332634 12502474|12502474 12502647|12502647 3L + 12502538 12502615 3'utr CG10681 FlyBase G29761.1 TTGTATAACCTGCTACTACATACAAGGACACAATTCGTTTAGTTAGATTTAAATGAAATATGCGTAATAATTTAAGAA 6 12502558 0.979081046 4 6 43 1 0.77815125 0 0 0 6 0 0 6 3L:12502538-12502615 6 CG10681 FBtr0332634|FBtr0075957 12502474|12502474 12502647|12502647 ACAAGG 6mer3-8 dme-miR-988-3p 3L + 12502539 12502571 3'utr CG10681 FlyBase G22530.1 TGTATAACCTGCTACTACATACAAGGACACAAT 8 12502557 0.936367957 4 7 30 0.9 0.954242509 0.1 0.25 0.4 8 1 0 9 3L:12502539-12502571 6 5.5 1453 FBgn0036291 74.39 9.18 14.21333333 0.073934669 0.59912854 0.3869606 1 2 1.5 0.2 dme-miR-970-3p 7mer-m8 TCTTATG 3L 12505366 12505372 + 3L_12505366_12505372_+ 0.638930496 0.657044044 0.64798727 0.012808179 vih FBtr0075958 12505147 12505821 3L + 12505323 12505382 3'utr vih FlyBase G29767.1 CGTTCAATGCTGATAGTTCATTTGGCAAAAGACCCCGTGCGTTTCTTATGTAATTGTCGA 6 12505364 0.98410851 5 6 47 1 0.77815125 0.333333333 0 0 6 0 0 6 3L:12505323-12505382 7 vih FBtr0075958 12505147 12505821 TCTTATG 7mer-m8 dme-miR-970-3p 3L + 12505352 12505378 3'utr vih FlyBase G22535.1 AGACCCCGTGCGTTTCTTATGTAATTG 5 12505365 0.833956576 3 5 37 1 0.84509804 0.428571429 0.4 0.571428571 5 0 0 7 3L:12505352-12505378 7 4.5 1454 FBgn0264848 630.4033333 52.49 79.89666667 0.007138287 0.085730615 0.05632275 2 1 1.5 0.2 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 12505632 12505637 + 3L_12505632_12505637_+ 0.999994414 0.99999507 0.999994742 4.95E-07 vih FBtr0075958 12505147 12505821 3L + 12505604 12505650 3'utr vih FlyBase G29770.1 AAGCGACTATGCTGCTGCGCCGGCCATTATGTGAATGTTAGCTAATT 25 12505631 0.691748466 7 25 173 1 1.491361694 0.193548387 0.2 0.35483871 25 0 0 31 3L:12505604-12505650 6 vih FBtr0075958 12505147 12505821 ATGTGA 6mer3-8 dme-miR-1003-3p 3L + 12505594 12505648 3'utr vih FlyBase G22537.1 GATGATTTTTAAGCGACTATGCTGCTGCGCCGGCCATTATGTGAATGTTAGCTAA 18 12505639 0.627681633 7 17 120 0.96969697 1.505149978 0 0.444444444 0.696969697 18 1 0 32 3L:12505594-12505648 6 17.5 1455 FBgn0264848 630.4033333 52.49 79.89666667 0.027760005 0.333396837 0.219032918 1 -7 -3 0.2 dme-miR-304-5p 7mer-m8 TGAGATT 3L 12508106 12508112 - 3L_12508106_12508112_- 0.595306836 0.504456367 0.549881601 0.064240934 sti FBtr0075970|FBtr0332643 12507996|12507996 12508356|12508356 3L - 12508091 12508129 3'utr sti FlyBase G36418.1 TATACACAAATAAAACTTGAGATTTTGATAAAAAAGGTA 16 12508113 0.809919574 4 15 104 1 1.278753601 0 0.1875 0.315789474 16 0 0 19 3L:12508091-12508129 7 sti FBtr0075970|FBtr0332643 12507996|12507996 12508356|12508356 TGAGATT 7mer-m8 dme-miR-304-5p 3L - 12508100 12508140 3'utr sti FlyBase G27519.1 ACTTTGTGCTGTATACACAAATAAAACTTGAGATTTTGATA 9 12508113 0.853816163 3 9 69 1 1.113943352 0 0.333333333 0.538461538 9 0 0 13 3L:12508100-12508140 7 11.5 1456 FBgn0002466 1895.133333 37.79 58.17333333 0.006068175 0.30431331 0.197685079 1 1 1 0.2 dme-miR-932-5p 7mer-A1 GAATTGA 3L 12519225 12519231 + 3L_12519225_12519231_+ 0.73165903 0.731659036 0.731659033 0 tral FBtr0332635|FBtr0332642|FBtr0332636|FBtr0332641|FBtr0332638|FBtr0332639|FBtr0332637|FBtr0332640|FBtr0075959 12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150 12520954|12519695|12519695|12519695|12519695|12519695|12520954|12519695|12519695 3L + 12519186 12519246 3'utr tral FlyBase G29788.1 ACACCAACCACAACCAACAAACCACAAATTGATAGATGCGAATTGAGAAGAGCGTAAAGTA 10 12519228 0.943966455 5 9 37 1 1.041392685 0.363636364 0.222222222 0.363636364 9 0 0 11 3L:12519186-12519246 7 tral FBtr0332639|FBtr0332637|FBtr0332640|FBtr0075959|FBtr0332635|FBtr0332636|FBtr0332642|FBtr0332641|FBtr0332638 12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150 12519695|12520954|12519695|12519695|12520954|12519695|12519695|12519695|12519695 GAATTGA 7mer-A1 dme-miR-932-5p 3L + 12519151 12519245 3'utr tral FlyBase G22544.1 GTGCCGCCCGGCCAGTGGAAAGCCACTTTAAATATACACCAACCACAACCAACAAACCACAAATTGATAGATGCGAATTGAGAAGAGCGTAAAGT 8 12519228 0.937618104 7 7 31 1 1.113943352 0.384615385 0.5 0.692307692 8 0 0 13 3L:12519151-12519245 7 6 1457 FBgn0041775 2554.613333 85.08333333 130.6233333 0.002348692 0.070519099 0.0459336 -3 -3 -3 0.2 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 12519509 12519514 + 3L_12519509_12519514_+ 0.844968771 0.730918098 0.787943434 0.080646023 tral FBtr0332635|FBtr0332642|FBtr0332636|FBtr0332641|FBtr0332638|FBtr0332639|FBtr0332637|FBtr0332640|FBtr0075959 12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150 12520954|12519695|12519695|12519695|12519695|12519695|12520954|12519695|12519695 3L + 12519463 12519526 3'utr tral FlyBase G29790.1 AGCGCTCTACGATTCGATTAATGATTAGCGACTAGCGCGAATGTGAATGTGAATGTGAACCGAA 24 12519509 0.966297742 10 22 121 0.925925926 1.096910013 0.444444444 0.125 0.222222222 24 1 1 25 3L:12519463-12519526 6 tral FBtr0332639|FBtr0332637|FBtr0332640|FBtr0075959|FBtr0332635|FBtr0332636|FBtr0332642|FBtr0332641|FBtr0332638 12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150 12519695|12520954|12519695|12519695|12520954|12519695|12519695|12519695|12519695 ATGTGA 6mer3-8 dme-miR-1003-3p 3L + 12519471 12519518 3'utr tral FlyBase G22547.1 ACGATTCGATTAATGATTAGCGACTAGCGCGAATGTGAATGTGAATGT 15 12519488 0.82186454 7 15 89 1 1.322219295 0.476190476 0.266666667 0.476190476 15 0 0 21 3L:12519471-12519518 6 14.5 1458 FBgn0041775 2554.613333 85.08333333 130.6233333 0.005676006 0.170421156 0.111006201 0 21 10.5 0.2 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 12519998 12520005 + 3L_12519998_12520005_+ 0.668591522 0.668665246 0.668628384 5.21E-05 tral FBtr0332635|FBtr0332637 12519150|12519150 12520954|12520954 3L + 12519982 12520021 3'utr tral FlyBase G29795.1 AAAAGAAAATAAAATCGGCAGCTACGCGCTTCTATCAAAA 104 12519996 0.895315589 5 91 412 0.872 1.560305243 0.072 0.153846154 0.296 104 14 2 109 3L:12519982-12520021 8 tral FBtr0332637|FBtr0332635 12519150|12519150 12520954|12520954 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L + 12519981 12520026 3'utr tral FlyBase G22550.1 AAAAAGAAAATAAAATCGGCAGCTACGCGCTTCTATCAAAAGCACA 67 12519996 0.857844646 5 63 246 0.978947368 1.968482949 0.178947368 0.313432836 0.515789474 67 2 0 93 3L:12519981-12520026 8 84.5 1459 FBgn0041775 2554.613333 85.08333333 130.6233333 0.033077413 0.993143976 0.646898206 2 2 2 0.2 dme-bantam-3p 7mer-m8 TGATCTC 3L 12520197 12520203 + 3L_12520197_12520203_+ 0.660977853 0.661596795 0.661287324 0.000437628 tral FBtr0332635|FBtr0332637 12519150|12519150 12520954|12520954 3L + 12520159 12520222 3'utr tral FlyBase G29796.1 AAGCCCAAATTTTCGGTTTTCGTACAGTTTATTTTCTCTGATCTCGGTTGGGCAAGGGAAATTA 88 12520197 0.99033327 8 82 827 0.922330097 1.67669361 0.27184466 0.125 0.252427184 88 7 1 95 3L:12520159-12520222 7 tral FBtr0332637|FBtr0332635 12519150|12519150 12520954|12520954 TGATCTC 7mer-m8 dme-bantam-3p 3L + 12520172 12520231 3'utr tral FlyBase G22551.1 CGGTTTTCGTACAGTTTATTTTCTCTGATCTCGGTTGGGCAAGGGAAATTATACTTACGA 50 12520197 0.978167442 8 46 513 0.898734177 1.550228353 0.443037975 0.42 0.632911392 50 7 1 71 3L:12520172-12520231 7 68 1460 FBgn0041775 2554.613333 85.08333333 130.6233333 0.02661851 0.799216454 0.520580805 0 0 0 0.2 dme-miR-2a-2-5p 6mer3-8 TGATGA 3L 12520266 12520271 + 3L_12520266_12520271_+ 0.990152088 0.965505125 0.977828606 0.017428061 tral FBtr0332635|FBtr0332637 12519150|12519150 12520954|12520954 3L + 12520243 12520329 3'utr tral FlyBase G29797.1 TTGAAAAGATACGATACCTATGGTGATGATGTTCTCAATGTAAATGTTAAGATTGATTGTGTGATTCACTGGCTGCTGCGCTTGAAA 41 12520271 0.737726945 12 36 333 0.894736842 1.707570176 0.333333333 0.341463415 0.526315789 41 6 0 51 3L:12520243-12520329 6 tral FBtr0332637|FBtr0332635 12519150|12519150 12520954|12520954 TGATGA 6mer3-8 dme-miR-2a-2-5p 3L + 12520247 12520327 3'utr tral FlyBase G22552.1 AAAGATACGATACCTATGGTGATGATGTTCTCAATGTAAATGTTAAGATTGATTGTGTGATTCACTGGCTGCTGCGCTTGA 45 12520270 0.721657385 13 40 387 0.87654321 1.152288344 0.37037037 0.444444444 0.691358025 45 6 4 71 3L:12520247-12520327 6 30 1461 FBgn0041775 2554.613333 85.08333333 130.6233333 0.01174346 0.352595495 0.229668002 -5 -4 -4.5 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 12527471 12527477 - 3L_12527471_12527477_- 0.661042652 0.660349389 0.66069602 0.000490237 nst FBtr0075967 12527213 12527630 3L - 12527448 12527501 3'utr nst FlyBase G36463.1 ATTCTGCAAATGTTCACTGTCTTTTGTGTTCTAAAGATGACATATTTTTTGCCA 25 12527478 0.659621256 8 25 263 1 1.431363764 0.074074074 0.08 0.148148148 25 0 0 27 3L:12527448-12527501 7 nst FBtr0075967 12527213 12527630 TGTGTTC 7mer-m8 dme-miR-317-3p 3L - 12527434 12527632 stop_codon nst FlyBase G27549.1 AGAGCGGAATGACGAACTAACCTCTCACGGGAATCGACAATTGACACAGATCCTGGATGGAGCAATAAATCTCTTTACTCTAAGGTGCTCAATAACTTAAAAAAAAAACAACTTAACTCTCAAACGCATTTATTCTGCAAATGTTCACTGTCTTTTGTGTTCTAAAGATGACATATTTTTTGCCATTATTTATAAAGTT 42 12527478 0.985356046 20 39 326 0.967213115 1.770852012 0.196721311 0.30952381 0.524590164 42 2 0 59 3L:12527434-12527632 7 19 1462 FBgn0036298 243.65 13.55666667 20.85333333 0.07798071 1.401524465 0.91112532 1 1 1 0.2 dme-miR-184-3p 7mer-m8 TCCGTCC 3L 12530631 12530637 - 3L_12530631_12530637_- 0.615378287 0.61427068 0.614824484 0.000783191 Tsf2 FBtr0075966 12530434 12530747 3L - 12530554 12530742 3'utr Tsf2 FlyBase G36473.2 TAGACTCACTTAGATTTCAGAATTCTACAAGCATCTCTAGCACAAAGAGAAAACATATCAACATTTTTACATTCCAAATATGATTAAGTTAAATGTGAAATCCCTTCCGTCCGAAAATGAAACTCTAACTAGCCGAAAAATATCTGTTGAAGGCTATAGTTTATAATTTATAAAGTCCTGTGCCTTATT 1471 12530638 0.902688607 34 1430 6990 0.982896847 2.565611725 0.631747728 0.205982325 0.375734901 1471 28 4 1839 3L:12530554-12530742 7 Tsf2 FBtr0075966 12530434 12530747 TCCGTCC 7mer-m8 dme-miR-184-3p 3L - 12530609 12530744 3'utr Tsf2 FlyBase G27552.3 ACTAGACTCACTTAGATTTCAGAATTCTACAAGCATCTCTAGCACAAAGAGAAAACATATCAACATTTTTACATTCCAAATATGATTAAGTTAAATGTGAAATCCCTTCCGTCCGAAAATGAAACTCTAACTAGCC 1090 12530638 0.936300892 17 1075 4916 0.981976383 2.420505837 0.617153511 0.351376147 0.560596644 1090 24 5 1580 3L:12530609-12530744 7 1192 1463 FBgn0036299 169.6666667 7.166666667 11.03333333 7.025540275 166.3255814 108.0362538 1 1 1 0.2 dme-miR-305-3p 6mer3-8 ATGTGC 3L 12741059 12741064 + 3L_12741059_12741064_+ 0.654925739 0.805318996 0.730122367 0.106344122 Ptp69D FBtr0075914|FBtr0075913 12740996|12740996 12741568|12741568 3L + 12741013 12741082 3'utr Ptp69D FlyBase G29832.1 ACTTATACGAGTACAGAATGCACGTGTTGGAACATCAATGCATCAAATGTGCTATGATAAATTATTTGTA 63 12741060 0.824824042 10 61 449 0.971014493 1.348953548 0.072463768 0.095238095 0.173913043 63 0 2 67 3L:12741013-12741082 6 Ptp69D FBtr0075914|FBtr0075913 12740996|12740996 12741568|12741568 ATGTGC 6mer3-8 dme-miR-305-3p 3L + 12741015 12741083 3'utr Ptp69D FlyBase G22575.1 TTATACGAGTACAGAATGCACGTGTTGGAACATCAATGCATCAAATGTGCTATGATAAATTATTTGTAT 34 12741060 0.985104445 7 32 260 0.964285714 1.73239376 0.214285714 0.441176471 0.660714286 34 2 0 54 3L:12741015-12741083 6 41 1464 FBgn0014007 2746.713333 63.97333333 98.05 0.014926931 0.640892038 0.418154003 -1 -1 -1 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 3L 12741211 12741217 + 3L_12741211_12741217_+ 0.605153492 0.600144336 0.602648914 0.003542039 Ptp69D FBtr0075914|FBtr0075913 12740996|12740996 12741568|12741568 3L + 12741178 12741237 3'utr Ptp69D FlyBase G29833.1 AATGTAGTGTATACGTATCGTATTGATAAAACTACCAAAGGAAAATAAGTAACATATTTT 78 12741210 0.966222122 5 77 212 0.978494624 1.959041392 0.010752688 0.153846154 0.290322581 78 2 0 91 3L:12741178-12741237 7 Ptp69D FBtr0075914|FBtr0075913 12740996|12740996 12741568|12741568 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 12741193 12741224 3'utr Ptp69D FlyBase G22576.1 TATCGTATTGATAAAACTACCAAAGGAAAATA 53 12741210 0.954896332 3 51 117 0.95890411 1.367976785 0.01369863 0.339622642 0.520547945 53 1 2 70 3L:12741193-12741224 7 64.5 1465 FBgn0014007 2746.713333 63.97333333 98.05 0.023482611 1.008232597 0.657827639 1 1 1 0.2 dme-miR-305-3p 6mer3-8 ATGTGC 3L 12746555 12746560 + 3L_12746555_12746560_+ 0.999999997 0.999999643 0.99999982 2.83E-07 CG32109 FBtr0075918 12746477 12746770 3L + 12746525 12746582 3'utr CG32109 FlyBase G29838.1 AATAATAAATGTTAAGCTGATTCCACTGTAATGTGCTATATCTGGTCCGTATTTTTGG 24 12746557 0.997597545 8 11 234 0.53125 0.929418926 0.09375 0.25 0.4375 24 14 1 17 3L:12746525-12746582 6 CG32109 FBtr0075918 12746477 12746770 ATGTGC 6mer3-8 dme-miR-305-3p 3L + 12746534 12746574 3'utr CG32109 FlyBase G22580.1 TGTTAAGCTGATTCCACTGTAATGTGCTATATCTGGTCCGT 14 12746556 0.998342382 5 6 133 0.3 0.954242509 0 0.714285714 0.866666667 14 21 0 9 3L:12746534-12746574 6 16.5 1466 FBgn0052109 192.0866667 22.89 35.27333333 0.085898726 0.720838794 0.467775468 -2 -1 -1.5 0.2 dme-miR-304-5p 8mer-A1 TGAGATTA 3L 12824572 12824579 + 3L_12824572_12824579_+ 0.625234573 0.625332381 0.625283477 6.92E-05 CG42588 FBtr0304053|FBtr0301717 12824517|12824517 12824650|12824650 3L + 12824528 12824588 3'utr CG42588 FlyBase G29883.1 TGGAAACACACTGGTAACAGAAAATCTTCTGAACAAGCACCATCTGAGATTATAACTTATT 14 12824570 0.976945955 5 12 75 0.894736842 1.230448921 0 0.214285714 0.421052632 14 2 0 17 3L:12824528-12824588 8 CG42588 FBtr0301717|FBtr0304053 12824517|12824517 12824650|12824650 TGAGATTA 8mer-A1 dme-miR-304-5p 3L + 12824537 12824590 3'utr CG42588 FlyBase G22612.1 ACTGGTAACAGAAAATCTTCTGAACAAGCACCATCTGAGATTATAACTTATTGT 13 12824571 0.9810472 6 12 77 0.941176471 1.204119983 0 0.230769231 0.411764706 13 1 0 16 3L:12824537-12824590 8 10.5 1467 FBgn0260965 649.5 9.203333333 14.18 0.016166282 1.140890982 0.740479549 2 1 1.5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 12852253 12852258 + 3L_12852253_12852258_+ 0.894724039 0.872538091 0.883631065 0.0156878 Wbp2 FBtr0273240|FBtr0273241|FBtr0332047 12852235|12852235|12852235 12853169|12853169|12853169 3L + 12852232 12852276 stop_codon Wbp2 FlyBase G29892.1 TGTAATTAAAAGCAAACTACTGTACCTCAAATAGCCATCCCGACA 37 12852252 0.654453339 4 37 153 1 1.662757832 0.152173913 0.189189189 0.347826087 37 0 0 46 3L:12852232-12852276 6 Wbp2 FBtr0332047|FBtr0273240|FBtr0273241 12852235|12852235|12852235 12853169|12853169|12853169 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 12852235 12852276 stop_codon Wbp2 FlyBase G22617.1 AATTAAAAGCAAACTACTGTACCTCAAATAGCCATCCCGACA 32 12852252 0.920082361 5 32 131 1 1.72427587 0.150943396 0.5 0.698113208 32 0 0 53 3L:12852235-12852276 6 34.5 1468 FBgn0036318 1204.006667 91.87 139.8366667 0.028654326 0.375530641 0.246716407 1 1 1 0.2 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 12894546 12894553 + 3L_12894546_12894553_+ 0.642254427 0.643304971 0.642779699 0.000742886 CG14118 FBtr0075870 12894495 12894758 3L + 12894528 12894564 3'utr CG14118 FlyBase G29896.1 TTTTAAGTGAGTGCAATAAAGACTGAGTGAGTTGTGT 18 12894544 0.872400093 3 17 87 0.947368421 1.255272505 0.736842105 0.055555556 0.105263158 18 1 0 18 3L:12894528-12894564 8 CG14118 FBtr0075870 12894495 12894758 AAGACTGA 8mer-A1 dme-miR-14-3p 3L + 12894529 12894566 3'utr CG14118 FlyBase G22619.1 TTTAAGTGAGTGCAATAAAGACTGAGTGAGTTGTGTGA 14 12894544 0.879132243 2 14 71 1 1.278753601 0.631578947 0.285714286 0.473684211 14 0 0 19 3L:12894529-12894566 8 16 1469 FBgn0036323 1 0.083333333 0.13 16 192 123.0769231 2 2 2 0.2 dme-miR-304-5p 8mer-A1 TGAGATTA 3L 1299857 1299864 + 3L_1299857_1299864_+ 0.555482011 0.564215412 0.559848712 0.006175446 scf FBtr0089941|FBtr0089942 1299832|1299832 1300389|1300389 3L + 1299831 1299963 stop_codon scf FlyBase G27015.1 TAGAGTGTCTAGATACCCAGAATCCCTGAGATTAAGATTGATCCTATGAATCTCCCACTTCGCATGCCAAATAACTTGTAATCTTGTCTAGCCCTTAAGACCTTAAGAAAGTGCATTATAAACCGACTCGAAT 587 1299862 0.890049899 29 559 3878 0.949712644 1.820201459 0.096264368 0.160136286 0.291666667 587 26 9 661 3L:1299831-1299963 8 scf FBtr0089941|FBtr0089942 1299832|1299832 1300389|1300389 TGAGATTA 8mer-A1 dme-miR-304-5p 3L + 1299711 1299961 stop_codon scf FlyBase G20453.1 GAGGCCGATGCGGACCACGATGATAAGTTGACAAAGGAGGAAATACTAGACAAGTACGACGTTTTCGTCGGCTCCCAGGCCACCGATTTCGGCGAGGCCTTGGCCCGCCACGATGAGTTCTAGAGTGTCTAGATACCCAGAATCCCTGAGATTAAGATTGATCCTATGAATCTCCCACTTCGCATGCCAAATAACTTGTAATCTTGTCTAGCCCTTAAGACCTTAAGAAAGTGCATTATAAACCGACTCGA 386 1299862 0.979498298 39 361 2483 0.942857143 1.845872874 0.090756303 0.383419689 0.6 386 27 7 561 3L:1299711-1299961 8 269.5 1470 FBgn0025682 1802 152.5933333 234.48 0.149556049 1.766132203 1.149351757 -5 -5 -5 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3L 1300222 1300228 + 3L_1300222_1300228_+ 0.606250969 0.596183045 0.601217007 0.007119151 scf FBtr0089941|FBtr0089942 1299832|1299832 1300389|1300389 3L + 1300135 1300233 3'utr scf FlyBase G27017.2 AGATACGCCGCCTTTGCCTGTGTAACATATGTATAAACATAAATGATTTTCGCTGTAGCCCGATTTATTTCCAGCTGCGAGAACATTCCAAAGAGAGTG 68 1300220 0.841920804 12 65 265 0.964705882 1.311753861 0.411764706 0.176470588 0.341176471 68 0 3 82 3L:1300135-1300233 7 scf FBtr0089941|FBtr0089942 1299832|1299832 1300389|1300389 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 1300182 1300233 3'utr scf FlyBase G20454.2 TTTCGCTGTAGCCCGATTTATTTCCAGCTGCGAGAACATTCCAAAGAGAGTG 28 1300220 0.809028302 5 27 85 1 1.643452676 0.386363636 0.535714286 0.704545455 28 0 0 44 3L:1300182-1300233 7 34 1471 FBgn0025682 1802 152.5933333 234.48 0.018867925 0.222814452 0.145001706 2 2 2 0.2 dme-miR-14-3p 7mer-A1 AGACTGA 3L 13009226 13009232 + 3L_13009226_13009232_+ 0.822420473 0.822317429 0.822368951 7.29E-05 CG14117 FBtr0306091|FBtr0332074 13009186|13008969 13009450|13009450 3L + 13009209 13009249 3'utr CG14117 FlyBase G29898.1 AATAACCCCAGATTTCGAGACTGATGGCTCAGAACGGATAT 36 13009223 0.616156631 5 36 185 1 1.591064607 0.102564103 0.055555556 0.128205128 36 0 0 39 3L:13009209-13009249 7 CG14117 FBtr0332074|FBtr0306091 13008969|13009186 13009450|13009450 AGACTGA 7mer-A1 dme-miR-14-3p 3L + 13009209 13009290 3'utr CG14117 FlyBase G22622.1 AATAACCCCAGATTTCGAGACTGATGGCTCAGAACGGATATGCGTCAAATTAAACGAGGATGTAGCCTTTAGCTATTTAGTT 38 13009233 0.905760003 8 38 207 1 1.77815125 0.183333333 0.342105263 0.583333333 38 0 0 60 3L:13009209-13009290 7 32 1472 FBgn0036331 82 9.843333333 15.15333333 0.390243902 3.250931256 2.11174659 3 -7 -2 0.2 dme-miR-999-3p 7mer-A1 GTTAACA 3L 13020168 13020174 - 3L_13020168_13020174_- 0.821830589 0.82128776 0.821559174 0.000383818 AdenoK FBtr0075895|FBtr0075896|FBtr0346531 13019980|13019980|13019713 13020289|13020289|13020289 3L - 13020160 13020202 3'utr AdenoK FlyBase G36606.1 AAGTAAATGAGAGTGACTAAAAGATTTTGTTAACACTGATAAT 27 13020175 0.662619382 6 26 215 0.971428571 1.531478917 0.257142857 0.222222222 0.4 27 1 0 34 3L:13020160-13020202 7 AdenoK FBtr0075896|FBtr0346531|FBtr0075895 13019980|13019713|13019980 13020289|13020289|13020289 GTTAACA 7mer-A1 dme-miR-999-3p 3L - 13020164 13020231 3'utr AdenoK FlyBase G27640.1 AAGCGCAGCAAGATTTGCAATTGTTAATTAAGTAAATGAGAGTGACTAAAAGATTTTGTTAACACTGA 19 13020175 0.983059798 6 18 153 0.941176471 1.505149978 0.117647059 0.631578947 0.794117647 19 2 0 32 3L:13020164-13020231 7 20 1473 FBgn0036337 473.9933333 36.92 56.63666667 0.042194686 0.541711809 0.353128127 1 1 1 0.2 dme-miR-980-3p 6mer2-7 GCAGCT 3L 1311764 1311769 - 3L_1311764_1311769_- 0.992763128 0.995284042 0.994023585 0.001782545 CG9186 FBtr0072728|FBtr0072727 1311717|1311717 1311929|1311929 3L - 1311720 1311900 3'utr CG9186 FlyBase G33267.1 AGCCCTGTCCATTACCTAATCCATCCATGCCAATAGACTTGGGAATCCGGATTACGGTTGAACAGCAAACCAATAGCAATTACTCCACTGCCTTTGTGTGGCAATTAGTTCGTTTTTATTAGTATCTTTTTGCAGCTCTCGAAGACAACTCTAAATATAGTCAAAAGTGATTTAACACGGT 78 1311771 0.883379304 21 78 564 1 2.037426498 0.036697248 0.307692308 0.504587156 78 0 0 109 3L:1311720-1311900 6 CG9186 FBtr0072728|FBtr0072727 1311717|1311717 1311929|1311929 GCAGCT 6mer2-7 dme-miR-980-3p 3L - 1311723 1311794 3'utr CG9186 FlyBase G25170.1 AGTTCGTTTTTATTAGTATCTTTTTGCAGCTCTCGAAGACAACTCTAAATATAGTCAAAAGTGATTTAACAC 26 1311771 0.789320498 5 26 207 1 1.591064607 0.051282051 0.384615385 0.58974359 26 0 0 39 3L:1311723-1311794 6 22 1474 FBgn0035206 326.0766667 28.00666667 42.93333333 0.067468796 0.785527255 0.51242236 2 2 2 0.2 dme-bantam-3p 6mer3-8 TGATCT 3L 13278505 13278510 + 3L_13278505_13278510_+ 0.99951497 0.99823744 0.998876205 0.0009034 caps FBtr0075832|FBtr0075833|FBtr0305480|FBtr0346864 13277310|13277310|13278030|13278123 13279642|13279642|13279642|13279642 3L + 13278465 13278553 3'utr caps FlyBase G29946.1 ATTGACCATCCTGCTGATCGGCCATTTAATTTGCATACAGTGATCTTAATATTTAGGTTATGCTTAAAAGCAGTTCAATTATTGTAAAT 106 13278510 0.991625236 15 92 1002 0.893129771 1.46612587 0.022900763 0.20754717 0.358778626 106 11 3 117 3L:13278465-13278553 6 caps FBtr0075832|FBtr0075833|FBtr0305480|FBtr0346864 13277310|13277310|13278030|13278123 13279642|13279642|13279642|13279642 TGATCT 6mer3-8 dme-bantam-3p 3L + 13278465 13278529 3'utr caps FlyBase G22666.1 ATTGACCATCCTGCTGATCGGCCATTTAATTTGCATACAGTGATCTTAATATTTAGGTTATGCTT 59 13278509 0.69590373 11 53 502 0.896551724 1.591064607 0.034482759 0.322033898 0.540229885 59 8 1 78 3L:13278465-13278529 6 72 1475 FBgn0023095 209.6666667 5.27 8.083333333 0.343402226 13.66223909 8.907216495 -5 -4 -4.5 0.2 dme-bantam-3p 6mer2-7 GATCTC 3L 1333330 1333335 - 3L_1333330_1333335_- 0.998750371 0.858330908 0.928540639 0.099291581 CG2211 FBtr0331866|FBtr0072723 1333237|1333237 1333416|1333416 3L - 1333287 1333388 3'utr CG2211 FlyBase G33271.1 ATTCAAACAGCCATGTTAGTCCAAACTTTCATATGGTATAAACTCCCTATTAAGATCTCGTTAAAACCACTGAAGACTTGAAATACGTGTAGTGCACTCTAA 77 1333328 0.968417021 14 69 557 0.902173913 1.220108088 0.141304348 0.155844156 0.293478261 77 5 4 83 3L:1333287-1333388 6 CG2211 FBtr0331866|FBtr0072723 1333237|1333237 1333416|1333416 GATCTC 6mer2-7 dme-bantam-3p 3L - 1333294 1333365 3'utr CG2211 FlyBase G25174.2 AACTTTCATATGGTATAAACTCCCTATTAAGATCTCGTTAAAACCACTGAAGACTTGAAATACGTGTAGTGC 62 1333328 0.924516305 11 62 379 1 1.954242509 0.055555556 0.322580645 0.533333333 62 0 0 90 3L:1333294-1333365 6 53 1476 FBgn0035211 37.72 2.756666667 4.2 1.405090138 19.2261185 12.61904762 -7 -7 -7 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 13386376 13386381 - 3L_13386376_13386381_- 0.938976833 0.99988313 0.969429982 0.043067258 CG10171 FBtr0075865|FBtr0075865|FBtr0075865|FBtr0075864|FBtr0075864|FBtr0075864 13385944|13385944|13385944|13386092|13386092|13386092 13386714|13386714|13386714|13386714|13386714|13386714 3L - 13386349 13386396 3'utr CG10171 FlyBase G36613.1 ATGACGTTGTTGTTACTGTGACTGTTCACCTCCATTTTGTGTATTAAC 16 13386372 0.98502915 6 16 130 1 1.301029996 0.5 0.1875 0.35 16 0 0 20 3L:13386349-13386396 6 CG10171 FBtr0075864|FBtr0075864|FBtr0075864|FBtr0075865|FBtr0075865|FBtr0075865 13386092|13386092|13386092|13385944|13385944|13385944 13386714|13386714|13386714|13386714|13386714|13386714 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 13386360 13386402 3'utr CG10171 FlyBase G27645.1 CGGATTATGACGTTGTTGTTACTGTGACTGTTCACCTCCATTT 17 13386373 0.700992705 6 16 151 1 1.447158031 0.428571429 0.411764706 0.642857143 17 0 0 28 3L:13386360-13386402 6 15 1477 FBgn0036353 70.39 4.823333333 7.333333333 0.213098451 3.109882516 2.045454545 -9 -8 -8.5 0.2 dme-miR-14-3p 7mer-A1 AGACTGA 3L 1343903 1343909 - 3L_1343903_1343909_- 0.779311678 0.71388864 0.746600159 0.046261118 Ptp61F FBtr0072719|FBtr0310161 1342717|1342717 1344327|1344327 3L - 1343886 1343951 3'utr Ptp61F FlyBase G33294.1 AAAATCGGGTAGAAATCACGTCAAATGTAGATTTTGCGCAATAGACTGACATTTTAGATCAAATTT 59 1343910 0.982685905 9 58 433 0.986486486 1.562292864 0.135135135 0.203389831 0.364864865 59 0 1 73 3L:1343886-1343951 7 Ptp61F FBtr0310161|FBtr0072719 1342717|1342717 1344327|1344327 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 1343886 1343929 3'utr Ptp61F FlyBase G25190.1 AAATGTAGATTTTGCGCAATAGACTGACATTTTAGATCAAATTT 34 1343910 0.923139298 3 31 223 0.88 1.342422681 0.22 0.323529412 0.54 34 5 1 44 3L:1343886-1343929 7 45.5 1478 FBgn0267487 1392.83 58.80666667 89.87333333 0.032667303 0.7737218 0.506268081 1 1 1 0.2 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 13483952 13483958 - 3L_13483952_13483958_- 0.47808222 0.526688871 0.502385545 0.034370127 Abp1 FBtr0075819 13483531 13484013 3L - 13483912 13483975 3'utr Abp1 FlyBase G36640.1 TAAATATCTACACCAATGCAGCTAGCAACTATATTTTGGATCCGGACTATAGCTACTTAAACAC 81 13483959 0.925631323 11 71 322 0.916666667 1.643452676 0.020833333 0.1875 0.322916667 80 7 1 88 3L:13483912-13483975 7 Abp1 FBtr0075819 13483531 13484013 GCAGCTA 7mer-A1 dme-miR-980-3p 3L - 13483936 13483990 3'utr Abp1 FlyBase G27663.2 GGGACGCCCTTTTGCTAAATATCTACACCAATGCAGCTAGCAACTATATTTTGGA 48 13483959 0.948217751 5 42 176 0.913580247 1.170261715 0.012345679 0.5 0.703703704 48 3 4 74 3L:13483936-13483990 7 53 1479 FBgn0036372 618.6666667 30.00333333 45.8 0.085668103 1.766470392 1.15720524 1 1 1 0.2 dme-miR-283-5p 8mer-A1 TGATATTA 3L 13509895 13509902 + 3L_13509895_13509902_+ 0.592132503 0.589260614 0.590696558 0.00203074 Spt20 FBtr0340705|FBtr0304904|FBtr0075812 13509797|13508879|13509797 13510695|13510695|13511541 3L + 13509871 13509914 3'utr Spt20 FlyBase G30001.1 GAAGGCTACGCGTTGTGTATTGCTTGATATTATAGTTTATGGTT 8 13509894 0.98605216 4 8 95 1 1 0 0.25 0.4 8 0 0 10 3L:13509871-13509914 8 Spt20 FBtr0075812|FBtr0304904|FBtr0340705 13509797|13508879|13509797 13511541|13510695|13510695 TGATATTA 8mer-A1 dme-miR-283-5p 3L + 13509837 13509912 3'utr Spt20 FlyBase G22707.1 CGACTGAGAGATGAAGCTATAGAGCGAACAAGTAGAAGGCTACGCGTTGTGTATTGCTTGATATTATAGTTTATGG 16 13509893 0.942297423 6 12 110 0.761904762 0.903089987 0.380952381 0.3125 0.476190476 16 4 1 16 3L:13509837-13509912 8 8 1480 FBgn0036374 444.0733333 7.2 11.05666667 0.018015043 1.111111111 0.723545372 1 2 1.5 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT 3L 13510012 13510018 + 3L_13510012_13510018_+ 0.579614223 0.584639397 0.58212681 0.003553353 Spt20 FBtr0340705|FBtr0304904|FBtr0075812 13509797|13508879|13509797 13510695|13510695|13511541 3L + 13509944 13510036 3'utr Spt20 FlyBase G30002.1 TGTATACCCATATAACTATATATGTTTTGATGTGTAATCGTAAGTGTAAATTGCATGGGCAACAGCATGGCAGCTCATAGTTGTGCAACCTAG 292 13510011 0.982357188 8 289 1074 0.991689751 2.553883027 0.318559557 0.178082192 0.335180055 292 3 0 358 3L:13509944-13510036 7 Spt20 FBtr0075812|FBtr0304904|FBtr0340705 13509797|13508879|13509797 13511541|13510695|13510695 GGCAGCT 7mer-m8 dme-miR-980-3p 3L + 13509990 13510036 3'utr Spt20 FlyBase G22708.1 TAAATTGCATGGGCAACAGCATGGCAGCTCATAGTTGTGCAACCTAG 185 13510011 0.973260255 5 181 622 0.982758621 2.45484486 0.437931034 0.358695652 0.593103448 184 5 0 285 3L:13509990-13510036 7 235 1481 FBgn0036374 444.0733333 7.2 11.05666667 0.529191875 32.63888889 21.25414531 1 1 1 0.2 dme-miR-34-5p 7mer-A1 ACTGCCA 3L 13515854 13515860 + 3L_13515854_13515860_+ 0.823129189 0.821155676 0.822142433 0.001395475 Liprin-beta FBtr0075813|FBtr0330342|FBtr0075814 13515759|13515759|13515759 13516276|13516276|13516276 3L + 13515770 13515875 3'utr Liprin-beta FlyBase G30022.1 CGAAAGGAGCACAAATCGATTGAAAGCAAATATGTTTTTTAGTTGTAAGCCCAAAACCTGGCCAAGGATCCCCAAACTGAATGAACTGCCACCTGAACCAATTATG 59 13515851 0.973035859 16 53 319 0.918918919 1.832508913 0.324324324 0.186440678 0.351351351 59 6 0 68 3L:13515770-13515875 7 Liprin-beta FBtr0330342|FBtr0075814|FBtr0075813 13515759|13515759|13515759 13516276|13516276|13516276 ACTGCCA 7mer-A1 dme-miR-34-5p 3L + 13515771 13515868 3'utr Liprin-beta FlyBase G22720.1 GAAAGGAGCACAAATCGATTGAAAGCAAATATGTTTTTTAGTTGTAAGCCCAAAACCTGGCCAAGGATCCCCAAACTGAATGAACTGCCACCTGAACC 43 13515851 0.975870382 9 38 237 0.892307692 1.763427994 0.307692308 0.325581395 0.553846154 43 7 0 58 3L:13515771-13515868 7 27.5 1482 FBgn0036376 801.8733333 34.78666667 53.21666667 0.034294693 0.790532771 0.516755402 3 3 3 0.2 dme-miR-980-5p 8mer-A1 GAAAAACA 3L 1352108 1352115 + 3L_1352108_1352115_+ 0.625247529 0.634245802 0.629746666 0.006362759 CG9166 FBtr0072680 1352030 1352853 3L + 1352079 1352110 3'utr CG9166 FlyBase G27073.1 ACGTGCGAGATCACTTGCAGTGTGATTTGGAA 19 1352105 0.781300346 2 18 126 0.962962963 1.414973348 0.222222222 0.210526316 0.444444444 19 1 0 26 3L:1352079-1352110 3 CG9166 FBtr0072680 1352030 1352853 GAAAAACA 8mer-A1 dme-miR-980-5p 3L + 1352080 1352110 3'utr CG9166 FlyBase G20493.1 CGTGCGAGATCACTTGCAGTGTGATTTGGAA 11 1352106 0.791903675 3 11 71 1 1.230448921 0.411764706 0.454545455 0.647058824 11 0 0 17 3L:1352080-1352110 3 13.5 1483 FBgn0029514 63.66666667 7.47 11.33666667 0.212041885 1.807228916 1.190826228 3 2 2.5 0.2 dme-miR-11-3p 8mer-m1 CTGTGATG 3L 13934344 13934351 + 3L_13934344_13934351_+ 0.461732852 0.461462519 0.461597685 0.000191202 Gl FBtr0075756 13934192 13934656 3L + 13934314 13934361 3'utr Gl FlyBase G30055.1 AATAACACAGCTCCTCAAGACTCCCTGCTCCTGTGATGTGACCTAAAC 102 13934341 0.696635919 10 99 772 0.956521739 1.740362689 0.113043478 0.117647059 0.217391304 102 4 1 110 3L:13934314-13934361 8 Gl FBtr0075756 13934192 13934656 CTGTGATG 8mer-m1 dme-miR-11-3p 3L + 13934316 13934361 3'utr Gl FlyBase G22738.1 TAACACAGCTCCTCAAGACTCCCTGCTCCTGTGATGTGACCTAAAC 51 13934342 0.670338775 6 46 368 0.921052632 1.367976785 0.118421053 0.352941176 0.565789474 51 4 2 70 3L:13934316-13934361 8 75 1484 FBgn0001108 959.94 25.44 38.93 0.078129883 2.948113208 1.926534806 3 2 2.5 0.2 dme-miR-184-5p 8mer-A1 TGATAAGA 3L 13972269 13972276 + 3L_13972269_13972276_+ 0.503476112 0.499557701 0.501516906 0.002770727 ssp2 FBtr0346645 13971662 13973067 3L + 13972181 13972278 3'utr ssp2 FlyBase G30078.1 TAACGAATATACAATAAGATCCTGCTCAGTGGCCACTAAACCACAAAAAAAAAGGAACGTATAAAACCAAACTGAAATTGATAGTAACTGATAAGAGT 26 13972256 0.971456671 10 21 124 0.838709677 1.414973348 0.193548387 0.115384615 0.258064516 26 5 0 26 3L:13972181-13972278 8 ssp2 FBtr0346645 13971662 13973067 TGATAAGA 8mer-A1 dme-miR-184-5p 3L + 13972232 13972285 3'utr ssp2 FlyBase G22754.1 AAGGAACGTATAAAACCAAACTGAAATTGATAGTAACTGATAAGAGTATTGAGA 11 13972260 0.962646606 4 9 54 0.952380952 1.301029996 0.476190476 0.636363636 0.80952381 11 1 0 20 3L:13972232-13972285 8 9.5 1485 FBgn0036389 1101.49 30.04333333 45.97333333 0.008624681 0.316209919 0.206641531 13 9 11 0.2 dme-miR-980-5p 7mer-A1 AAAAACA 3L 13997983 13997989 + 3L_13997983_13997989_+ 0.777532712 0.770710257 0.774121484 0.004824165 CG17361 FBtr0075767 13997837 13998055 3L + 13997957 13998041 3'utr CG17361 FlyBase G30098.1 TGAAAGTACATATGGAGTGTAGTTTTAAAAACAATTTCATGTTCTCATATTGACAATAAGATAATAAAGAAATGATAATCGGATC 46 13997995 0.990520245 13 41 413 0.883333333 1.72427587 0.3 0.217391304 0.4 46 7 0 53 3L:13997957-13998041 7 CG17361 FBtr0075767 13997837 13998055 AAAAACA 7mer-A1 dme-miR-980-5p 3L + 13997915 13998019 3'utr CG17361 FlyBase G22765.1 TTCGATATATTTTTAAAGTAGAAACAAGTTAGCGACTAATAATGAAAGTACATATGGAGTGTAGTTTTAAAAACAATTTCATGTTCTCATATTGACAATAAGATA 38 13997995 0.96893913 14 34 345 0.921568627 1.371067862 0.235294118 0.289473684 0.470588235 38 3 1 47 3L:13997915-13998019 7 31 1486 FBgn0036395 38.90333333 5.8 9.033333333 0.796846885 5.344827586 3.431734317 -12 -12 -12 0.2 dme-miR-965-3p 7mer-m8 TACGCTT 3L 13999609 13999615 - 3L_13999609_13999615_- 0.618978165 0.61891036 0.618944262 4.79E-05 CG8783 FBtr0333025|FBtr0075786|FBtr0075785 13999378|13999378|13999378 13999734|13999734|13999734 3L - 13999592 13999638 3'utr CG8783 FlyBase G36691.1 AAAGTTTGCGAAGCAAATCAATTTACGCTTGTAGACTACATATTTTG 142 13999616 0.758056456 6 142 1141 1 2.201397124 0.213836478 0.105633803 0.201257862 142 0 0 159 3L:13999592-13999638 7 CG8783 FBtr0075786|FBtr0075785|FBtr0333025 13999378|13999378|13999378 13999734|13999734|13999734 TACGCTT 7mer-m8 dme-miR-965-3p 3L - 13999595 13999639 3'utr CG8783 FlyBase G27698.1 TAAAGTTTGCGAAGCAAATCAATTTACGCTTGTAGACTACATATT 82 13999616 0.75354898 5 81 636 0.992248062 2.10720997 0.317829457 0.390243902 0.612403101 82 1 0 128 3L:13999595-13999639 7 112 1487 FBgn0036397 101 5.286666667 8.043333333 1.108910891 21.18537201 13.92457522 1 1 1 0.2 dme-miR-184-5p 6mer3-8 TGATAA 3L 14018034 14018039 + 3L_14018034_14018039_+ 0.526671173 0.868220316 0.697445745 0.241511685 upSET FBtr0075768|FBtr0333050 14017876|14017876 14020148|14020148 3L + 14017973 14018048 3'utr upSET FlyBase G30151.1 AAAGTAATACAGCTTCATACAAAGGCCGCTTTATTGCAGGTTGATTCAAATTTTATGTATCTGATAATAGCTAACC 16 14018028 0.990966598 5 14 146 0.869565217 1.301029996 0.173913043 0.25 0.47826087 16 3 0 20 3L:14017973-14018048 6 upSET FBtr0333050|FBtr0075768 14017876|14017876 14020148|14020148 TGATAA 6mer3-8 dme-miR-184-5p 3L + 14018007 14018055 3'utr upSET FlyBase G22801.1 TGCAGGTTGATTCAAATTTTATGTATCTGATAATAGCTAACCGGTACCA 7 14018028 0.965348333 4 7 75 1 1 0 0.285714286 0.5 7 0 0 10 3L:14018007-14018055 6 9.5 1488 FBgn0036398 2404.643333 22.86666667 35.16333333 0.00395069 0.415451895 0.270167788 6 6 6 0.2 dme-miR-968-5p 7mer-A1 CTACTTA 3L 14018334 14018340 + 3L_14018334_14018340_+ 0.401860159 0.592796434 0.497328297 0.135012282 upSET FBtr0075768|FBtr0333050 14017876|14017876 14020148|14020148 3L + 14018309 14018421 3'utr upSET FlyBase G30154.1 TGTCACAGCAATCAAACCGCTTAACCTACTTATAAACAAGGAACCTACAATATATATATATGCACATGTATATGCTAGACACCTTTAAATAGAGCCTATGTAGCGCGATATAA 25 14018338 0.888485288 13 25 135 1 1.51851394 0.090909091 0.16 0.363636364 25 0 0 33 3L:14018309-14018421 7 upSET FBtr0333050|FBtr0075768 14017876|14017876 14020148|14020148 CTACTTA 7mer-A1 dme-miR-968-5p 3L + 14018308 14018345 3'utr upSET FlyBase G22803.1 ATGTCACAGCAATCAAACCGCTTAACCTACTTATAAAC 12 14018320 0.912550699 5 9 62 0.8125 0.636822098 0 0.166666667 0.375 12 1 2 13 3L:14018308-14018345 7 10.5 1489 FBgn0036398 2404.643333 22.86666667 35.16333333 0.004366552 0.459183673 0.298606503 -4 14 5 0.2 dme-miR-282-5p 6mer3-8 AGAGGC 3L 14019021 14019026 + 3L_14019021_14019026_+ 0.947685783 0.951997509 0.949841646 0.003048832 upSET FBtr0075768|FBtr0333050 14017876|14017876 14020148|14020148 3L + 14018767 14019122 3'utr upSET FlyBase G30159.1 ATTTAAAACACATTACCTAGTACAGAACTTGGCAAATAATACAAACTGTAATTGTTAGAGAGACCAGCGAAAACAAAATCCGGAACTAACAAAATTGTAAATAATATTTTTAAAACCCAAACATGAGCAACCAAAAGGATGAAAGTAAAAACTACTTGTCTTATTAAGCAAGTTAGTTAAGTAAGTTAAAAAGAGTACAAAGCGAGGGTTAATTGATTGAAATTATGCTAATGGATCGCATTAAAATTGTAAATAGAGGCAGCAACAGAAAGTGTCCGTAGCCATTTTCGTATATAGGCTTAATTATTTTAATCTTTCGAATTTCGTCTAAAGTAAAATATTCACAAATTAATTGT 108 14019019 0.9727426 37 100 601 0.932835821 2.096910013 0.186567164 0.175925926 0.335820896 108 9 0 125 3L:14018767-14019122 6 upSET FBtr0333050|FBtr0075768 14017876|14017876 14020148|14020148 AGAGGC 6mer3-8 dme-miR-282-5p 3L + 14018846 14019047 3'utr upSET FlyBase G22808.1 CCGGAACTAACAAAATTGTAAATAATATTTTTAAAACCCAAACATGAGCAACCAAAAGGATGAAAGTAAAAACTACTTGTCTTATTAAGCAAGTTAGTTAAGTAAGTTAAAAAGAGTACAAAGCGAGGGTTAATTGATTGAAATTATGCTAATGGATCGCATTAAAATTGTAAATAGAGGCAGCAACAGAAAGTGTCCGTAG 51 14019019 0.974266107 18 40 212 0.911392405 1.556302501 0.164556962 0.431372549 0.632911392 51 6 1 72 3L:14018846-14019047 6 21.5 1490 FBgn0036398 2404.643333 22.86666667 35.16333333 0.008941035 0.940233236 0.611432363 2 2 2 0.2 dme-miR-970-3p 8mer-A1 TCTTATGA 3L 14021058 14021065 - 3L_14021058_14021065_- 0.630220735 0.629339883 0.629780309 0.00062282 ptip FBtr0075784 14020313 14021220 3L - 14020930 14021106 3'utr ptip FlyBase G36703.1 CGCAATGTCATTGGCCATTGATGTTGTAGGCCGCGCCAATTTCTTATGATATACCAACGCGAAACTAGTCCATAGAGTTCGTCAATTCAATCGGGCATGCCGGAACGAATGAGTTTATAGGGTCTCGGGCACATCGGCATATCGGTCACAGCTAGACAAATTTATTGCATCCCCCTA 82 14021066 0.981844784 15 79 588 0.956521739 1.944482672 0.358695652 0.109756098 0.206521739 82 4 0 88 3L:14020930-14021106 8 ptip FBtr0075784 14020313 14021220 TCTTATGA 8mer-A1 dme-miR-970-3p 3L - 14020997 14021088 3'utr ptip FlyBase G27705.1 TGATGTTGTAGGCCGCGCCAATTTCTTATGATATACCAACGCGAAACTAGTCCATAGAGTTCGTCAATTCAATCGGGCATGCCGGAACGAAT 32 14021066 0.999759654 7 31 195 0.955555556 1.633468456 0.177777778 0.28125 0.488888889 32 2 0 43 3L:14020997-14021088 8 40 1491 FBgn0052133 645.9666667 9.623333333 14.77 0.0619227 4.156563907 2.708192282 1 1 1 0.2 dme-miR-92b-3p 6mer2-7 TGCAAT 3L 14034051 14034056 + 3L_14034051_14034056_+ 0.757914084 0.503158912 0.630536498 0.180139129 CG6650 FBtr0075769|FBtr0304672|FBtr0343100 14033995|14033995|14033995 14034640|14034640|14034909 3L + 14033968 14034169 stop_codon CG6650 FlyBase G30174.1 CTGCCTCCGGACTCGCGGCACAGTTGTAGGATCGGCTATCACAATGGGACAGGCAAAGACTGCATAGTATTTCACTAGAAACCTGCAATGAAAGACTCGAATAGAAGGCCAGGACGAAACCCCGATGCATTCCCCCGCTGGATGGACATGAACTCGGCATGTTTAGCACCTTAGTGACCTTAGAAACGCGTTACCTTCACAC 165 14034032 0.952965366 23 147 648 0.897297297 1.178715403 0.178378378 0.096969697 0.194594595 165 9 10 166 3L:14033968-14034169 6 CG6650 FBtr0343100|FBtr0075769|FBtr0304672 14033995|14033995|14033995 14034909|14034640|14034640 TGCAAT 6mer2-7 dme-miR-92b-3p 3L + 14033963 14034171 stop_codon CG6650 FlyBase G22821.1 CATCTCTGCCTCCGGACTCGCGGCACAGTTGTAGGATCGGCTATCACAATGGGACAGGCAAAGACTGCATAGTATTTCACTAGAAACCTGCAATGAAAGACTCGAATAGAAGGCCAGGACGAAACCCCGATGCATTCCCCCGCTGGATGGACATGAACTCGGCATGTTTAGCACCTTAGTGACCTTAGAAACGCGTTACCTTCACACAA 86 14034032 0.946291426 22 77 314 0.875968992 1.149988456 0.147286822 0.418604651 0.612403101 86 9 7 113 3L:14033963-14034171 6 38 1492 FBgn0036402 661.0066667 31.6 48.21 0.057488074 1.202531646 0.788218212 19 19 19 0.2 dme-bantam-3p 7mer-A1 GATCTCA 3L 14052405 14052411 + 3L_14052405_14052411_+ 0.819612251 0.820530081 0.820071166 0.000648983 CG6833 FBtr0302433|FBtr0075774 14052207|14052207 14052469|14052469 3L + 14052392 14052422 3'utr CG6833 FlyBase G30205.1 AAAAGCAGGCTCGGATCTCATGATGAAACCA 17 14052412 0.680372651 3 15 65 0.954545455 1.322219295 0.181818182 0.235294118 0.409090909 17 1 0 21 3L:14052392-14052422 7 CG6833 FBtr0302433|FBtr0075774 14052207|14052207 14052469|14052469 GATCTCA 7mer-A1 dme-bantam-3p 3L + 14052393 14052420 3'utr CG6833 FlyBase G22843.1 AAAGCAGGCTCGGATCTCATGATGAAAC 19 14052412 0.65185109 2 19 71 1 1.397940009 0.32 0.315789474 0.48 19 0 0 25 3L:14052393-14052420 7 18 1493 FBgn0036405 208.48 21.87 33.59 0.086339217 0.823045267 0.535873772 -7 -7 -7 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3L 14070252 14070258 + 3L_14070252_14070258_+ 0.408457856 0.387603619 0.398030737 0.014746217 CG32138 FBtr0075776|FBtr0075775|FBtr0114573|FBtr0334053 14070133|14070133|14070133|14069144 14070369|14070369|14071583|14070369 3L + 14070143 14070329 3'utr CG32138 FlyBase G30241.1 ACGAGATAGAGATCGACGCAATGACGACGACGGGGCAATGGCAACGAATCGAAAATCAAAATTCACACTGAAACCGAAACAAAAAGAGAACATTACAGATACTGCAATATGTGATTAGGCGATTAAATTGTTTTCGAGACACTCTTACACATACACAAATTCACATTCCCTTTTATGCAAATCCTTA 3892 14070258 0.983714556 28 3721 28137 0.96001729 2.267367313 0.208126216 0.156731757 0.290685109 3892 162 23 4442 3L:14070143-14070329 7 CG32138 FBtr0334053|FBtr0114573|FBtr0075775|FBtr0075776 14069144|14070133|14070133|14070133 14070369|14071583|14070369|14070369 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 14070144 14070333 3'utr CG32138 FlyBase G22873.1 CGAGATAGAGATCGACGCAATGACGACGACGGGGCAATGGCAACGAATCGAAAATCAAAATTCACACTGAAACCGAAACAAAAAGAGAACATTACAGATACTGCAATATGTGATTAGGCGATTAAATTGTTTTCGAGACACTCTTACACATACACAAATTCACATTCCCTTTTATGCAAATCCTTATATT 2356 14070258 0.980988992 30 2208 16293 0.943160691 2.152410664 0.225232404 0.40959253 0.630544489 2356 190 24 3551 3L:14070144-14070333 7 2967 1494 FBgn0267795 5755.37 129.1033333 198.11 0.515518551 22.98159097 14.97652819 -6 -6 -6 0.2 dme-miR-932-5p 6mer2-7 GAATTG 3L 14070817 14070822 + 3L_14070817_14070822_+ 0.974107749 0.793318707 0.883713228 0.127837128 CG32138 FBtr0114573 14070133 14071583 3L + 14070770 14070855 3'utr CG32138 FlyBase G30245.1 TCCGAATTTTAATTAATTTTATGAAATTAGTAAGTCAAATAAGCATTGAATTGTATGAGAAGAGAGTAAAACGCATTAAACTTTTG 30 14070820 0.977059685 12 28 179 0.971428571 1.531478917 0.485714286 0.1 0.228571429 30 1 0 34 3L:14070770-14070855 6 CG32138 FBtr0114573 14070133 14071583 GAATTG 6mer2-7 dme-miR-932-5p 3L + 14070798 14070836 3'utr CG32138 FlyBase G22877.1 AGTAAGTCAAATAAGCATTGAATTGTATGAGAAGAGAGT 15 14070820 0.599484248 5 15 79 1 1.342422681 0.318181818 0.266666667 0.5 15 0 0 22 3L:14070798-14070836 6 18.5 1495 FBgn0267795 5755.37 129.1033333 198.11 0.003214389 0.143296068 0.093382464 -3 -3 -3 0.2 dme-miR-92b-3p 6mer3-8 GTGCAA 3L 143868 143873 + 3L_143868_143873_+ 0.905675433 0.922761252 0.914218343 0.012081556 Pdk1 FBtr0072464|FBtr0072470|FBtr0072467|FBtr0072471|FBtr0072466|FBtr0072465|FBtr0333218 143819|143819|143819|143819|143819|143819|143819 144642|145293|145293|145293|145293|144642|145895 3L + 143737 144054 stop_codon Pdk1 FlyBase G26662.1 CAAGCTTCGACGGCGTCTGACAACCGGACATTGGGTAGCACCAGAACGGGGACGTCACCTAGCAAGAAGACGGCGTCTAAGTAAACGTAGTCCTATTTATAGCAATGTGAAATTAATTTAGTTGAAATTTAGTGCAAACGAAGCGATGGCGTAGAAGAGGGCGGGAATAGAAGTAAGCTTAGAAGTAGAAGTAAGTGATGAAGGGGAAATAATGATCGTGTCTCTAGTGCTAATTAGAACCAAATTTCTGTTTTCCGATTTGTATTGTGCTTAGGGCGAAAATATAACACTAGAATAAACTTATCTAAAGTAAAATAC 336 143865 0.981656492 48 321 2349 0.955380577 1.782950133 0.367454068 0.119047619 0.223097113 336 12 5 364 3L:143737-144054 6 Pdk1 FBtr0333218|FBtr0072468|FBtr0072470|FBtr0072466|FBtr0072465|FBtr0072464|FBtr0072469|FBtr0072467|FBtr0072471 143819|143819|143819|143819|143819|143819|143819|143819|143819 145895|144054|145293|145293|144642|144642|144054|145293|145293 GTGCAA 6mer3-8 dme-miR-92b-3p 3L + 143815 143909 stop_codon Pdk1 FlyBase G20164.1 AAGTAAACGTAGTCCTATTTATAGCAATGTGAAATTAATTTAGTTGAAATTTAGTGCAAACGAAGCGATGGCGTAGAAGAGGGCGGGAATAGAAG 169 143865 0.976748223 12 158 1070 0.930041152 1.752048448 0.440329218 0.343195266 0.543209877 169 14 3 226 3L:143815-143909 6 168.5 1496 FBgn0020386 1614.923333 45.11666667 69.42333333 0.104339318 3.734761729 2.42713785 3 3 3 0.2 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 14541397 14541404 - 3L_14541397_14541404_- 0.628106476 0.628064775 0.628085625 2.95E-05 Gbs-70E FBtr0333037|FBtr0075724 14540935|14541044 14542118|14542118 3L - 14541352 14541432 3'utr Gbs-70E FlyBase G36754.1 TTTTATCTTTTTGGTTACTTGAAACGCTAAGACTGAAATGGCTTGTTATGGAGAAGAAAACACGTCCTGCAATACATTATA 403 14541405 0.934959122 14 377 2083 0.931623932 1.794388449 0.162393162 0.141439206 0.260683761 403 26 6 436 3L:14541352-14541432 8 Gbs-70E FBtr0075724|FBtr0333037 14541044|14540935 14542118|14542118 AAGACTGA 8mer-A1 dme-miR-14-3p 3L - 14541350 14541420 3'utr Gbs-70E FlyBase G27745.1 GGTTACTTGAAACGCTAAGACTGAAATGGCTTGTTATGGAGAAGAAAACACGTCCTGCAATACATTATATA 261 14541405 0.91487113 10 236 1092 0.908641975 1.963787827 0.187654321 0.390804598 0.607407407 261 34 3 368 3L:14541350-14541420 8 317 1497 FBgn0036428 388.9433333 16.83333333 25.64666667 0.815028753 18.83168317 12.36028074 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 14541698 14541703 - 3L_14541698_14541703_- 0.94905652 0.94861069 0.948833605 0.000315228 Gbs-70E FBtr0333037|FBtr0333037|FBtr0333037|FBtr0075724|FBtr0075724|FBtr0075724|FBtr0075723|FBtr0075723|FBtr0075723 14540935|14540935|14540935|14541044|14541044|14541044|14541535|14541535|14541535 14542118|14542118|14542118|14542118|14542118|14542118|14542118|14542118|14542118 3L - 14541662 14541741 3'utr Gbs-70E FlyBase G36756.1 TTGGAAAAGATAGATTTATATGTTTACCTGTATGCCTGTGTGATCGTCTACATCTATATAACTGATACTAGATTTATGTT 30 14541705 0.863588096 9 27 255 0.906976744 1.290034611 0.046511628 0.3 0.511627907 30 3 1 39 3L:14541662-14541741 6 Gbs-70E FBtr0075723|FBtr0075723|FBtr0075723|FBtr0075724|FBtr0075724|FBtr0075724|FBtr0333037|FBtr0333037|FBtr0333037 14541535|14541535|14541535|14541044|14541044|14541044|14540935|14540935|14540935 14542118|14542118|14542118|14542118|14542118|14542118|14542118|14542118|14542118 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 14541653 14541716 3'utr Gbs-70E FlyBase G27747.1 ACCTGTATGCCTGTGTGATCGTCTACATCTATATAACTGATACTAGATTTATGTTAACTAAAAA 16 14541705 0.759781657 10 16 134 1 1.342422681 0.045454545 0.125 0.363636364 16 0 0 22 3L:14541653-14541716 6 14.5 1498 FBgn0036428 388.9433333 16.83333333 25.64666667 0.037280495 0.861386139 0.565375617 2 2 2 0.2 dme-miR-305-3p 8mer-A1 ATGTGCCA 3L 14541904 14541911 - 3L_14541904_14541911_- 0.57757403 0.578245933 0.577909981 0.000475105 Gbs-70E FBtr0333037|FBtr0075724|FBtr0075723 14540935|14541044|14541535 14542118|14542118|14542118 3L - 14541882 14541950 3'utr Gbs-70E FlyBase G36757.1 TGACCTAAGCTAATACCCGGTACAAATATCCCAATTTTAATGTGCCATTGACTTGAGGTTTACTCAATA 15 14541901 0.896376721 4 12 108 0.833333333 0.875061263 0 0.2 0.333333333 15 2 1 15 3L:14541882-14541950 8 Gbs-70E FBtr0075723|FBtr0075724|FBtr0333037 14541535|14541044|14540935 14542118|14542118|14542118 ATGTGCCA 8mer-A1 dme-miR-305-3p 3L - 14541861 14541913 3'utr Gbs-70E FlyBase G27748.1 TAATGTGCCATTGACTTGAGGTTTACTCAATATAAAATGAGATAGGAGGGCTT 12 14541896 0.985621338 8 11 82 0.894736842 1.230448921 0 0.5 0.684210526 12 2 0 17 3L:14541861-14541913 8 9 1499 FBgn0036428 388.9433333 16.83333333 25.64666667 0.023139618 0.534653465 0.350922797 -10 -15 -12.5 0.2 dme-miR-11-3p 7mer-m1 TGTGATG 3L 14628472 14628478 - 3L_14628472_14628478_- 0.411163958 0.386642585 0.398903272 0.017339248 RecQ5 FBtr0100362|FBtr0075714 14628158|14628158 14630439|14630508 3L - 14628457 14628496 5'utr-intron RecQ5 FlyBase G36768.1 TTGCTCACTCAGCGCATTTGTGATGGAAGCTTAGGTAAGA 17 14628479 0.752964507 3 17 106 1 1.380211242 0 0.235294118 0.458333333 17 0 0 24 3L:14628457-14628496 7 RecQ5 FBtr0075714|FBtr0100362 14628158|14628158 14630508|14630439 TGTGATG 7mer-m1 dme-miR-11-3p 3L - 14628464 14628504 5'utr RecQ5 FlyBase G27756.1 TGGCAAAATTGCTCACTCAGCGCATTTGTGATGGAAGCTTA 12 14628479 0.71989218 4 11 77 0.823529412 1.146128036 0 0.333333333 0.529411765 12 3 0 14 3L:14628464-14628504 7 14.5 1500 FBgn0027375 1332.03 47.24333333 72.63666667 0.010885641 0.306921612 0.199623698 1 1 1 0.2 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 14630025 14630031 - 3L_14630025_14630031_- 0.596811649 0.745262855 0.671037252 0.104970921 RecQ5 FBtr0100362|FBtr0075714 14628158|14628158 14630439|14630508 3L - 14629970 14630054 5'utr RecQ5 FlyBase G36773.1 TTAATCTTCGAAAGCAAATTAGTGCAGCTAGGCAGTTGGAACAGGAAACAATTGCTCAAATATCTCGCGTTCGAATGGCAGAAGC 14 14630035 0.969930584 8 12 70 0.933333333 1.146128036 0.2 0.071428571 0.133333333 14 1 0 14 3L:14629970-14630054 7 RecQ5 FBtr0075714|FBtr0100362 14628158|14628158 14630508|14630439 GCAGCTA 7mer-A1 dme-miR-980-3p 3L - 14630014 14630050 5'utr RecQ5 FlyBase G27759.1 TCTTCGAAAGCAAATTAGTGCAGCTAGGCAGTTGGAA 12 14630035 0.688493435 4 12 50 1 1.230448921 0.235294118 0.25 0.470588235 12 0 0 17 3L:14630014-14630050 7 10 1501 FBgn0027375 1332.03 47.24333333 72.63666667 0.007507338 0.211670077 0.137671516 4 4 4 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 1467677 1467683 + 3L_1467677_1467683_+ 0.732585439 0.730005922 0.73129568 0.001823982 rho FBtr0333207|FBtr0333207|FBtr0333207|FBtr0072694|FBtr0072694|FBtr0072694 1467352|1467352|1467352|1467352|1467352|1467352 1468944|1468944|1468944|1468475|1468475|1468475 3L + 1467651 1467702 3'utr rho FlyBase G27090.1 CGAAGCCGAAACGTGTAAACAAATGTTGTGATAGAACCAAAGACTGAATTTA 65 1467675 0.842953324 5 60 354 0.936708861 1.568201724 0 0.2 0.341772152 65 4 1 74 3L:1467651-1467702 7 rho FBtr0333207|FBtr0333207|FBtr0333207|FBtr0072694|FBtr0072694|FBtr0072694 1467352|1467352|1467352|1467352|1467352|1467352 1468944|1468944|1468944|1468475|1468475|1468475 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 1467657 1467703 3'utr rho FlyBase G20508.1 CGAAACGTGTAAACAAATGTTGTGATAGAACCAAAGACTGAATTTAT 60 1467674 0.829437338 7 56 327 0.94047619 1.897627091 0.023809524 0.3 0.5 60 5 0 79 3L:1467657-1467703 7 62.5 1502 FBgn0004635 880.87 41.8 65 0.070952581 1.495215311 0.961538462 2 3 2.5 0.2 dme-miR-970-3p 8mer-A1 TCTTATGA 3L 14750986 14750993 - 3L_14750986_14750993_- 0.588950618 0.567318472 0.578134545 0.015296205 Trl FBtr0075705|FBtr0075706|FBtr0333046|FBtr0075703 14750240|14750240|14750240|14750952 14751158|14752905|14751158|14751158 3L - 14750954 14751050 5'utr Trl FlyBase G36783.1 AATTAGTTTTAGAAAGCCAGAAAGGCATATTTAGTTGTTTACCGTTTTGTTGTACAATCTTATGACTTTAAATGTTGATTTACCCCTCCTACAACTT 36 14750971 0.706241606 15 32 305 0.88372093 1.278753601 0.162790698 0.166666667 0.302325581 36 4 1 38 3L:14750954-14751050 8 Trl FBtr0333046|FBtr0075703|FBtr0075705|FBtr0075706 14750240|14750952|14750240|14750240 14751158|14751158|14751158|14752905 TCTTATGA 8mer-A1 dme-miR-970-3p 3L - 14750945 14751000 5'utr-coding Trl FlyBase G27767.1 TGTACAATCTTATGACTTTAAATGTTGATTTACCCCTCCTACAACTTATTTTGTTG 9 14750964 0.985504072 6 9 82 1 1.176091259 0.2 0.555555556 0.733333333 9 0 0 15 3L:14750945-14751000 8 9 1503 FBgn0013263 1897.606667 85.71333333 130.6566667 0.004742816 0.105001167 0.068882823 -22 -29 -25.5 0.2 dme-miR-965-3p 6mer2-7 ACGCTT 3L 14751088 14751093 - 3L_14751088_14751093_- 0.784267068 0.995647544 0.889957306 0.149468514 Trl FBtr0075705|FBtr0075706|FBtr0333046|FBtr0075703 14750240|14750240|14750240|14750952 14751158|14752905|14751158|14751158 3L - 14751060 14751100 5'utr Trl FlyBase G36784.1 TTGCTAAACGCTTTAAATATTCTCTTTGCGGAATGCGTAGA 5 14751074 0.970214971 5 5 44 1 0.698970004 0.2 0 0 5 0 0 5 3L:14751060-14751100 6 Trl FBtr0333046|FBtr0075703|FBtr0075705|FBtr0075706 14750240|14750952|14750240|14750240 14751158|14751158|14751158|14752905 ACGCTT 6mer2-7 dme-miR-965-3p 3L - 14751016 14751111 5'utr Trl FlyBase G27768.1 AATTTGGGTTTTTGCTAAACGCTTTAAATATTCTCTTTGCGGAATGCGTAGACAAATTCTAAATTAGTTTTAGAAAGCCAGAAAGGCATATTTAGT 13 14751087 0.986098189 8 12 99 0.944444444 0.929418926 0.333333333 0.384615385 0.555555556 13 0 1 17 3L:14751016-14751111 6 4.5 1504 FBgn0013263 1897.606667 85.71333333 130.6566667 0.002371408 0.052500583 0.034441411 -19 -6 -12.5 0.2 dme-miR-317-3p 8mer-A1 TGTGTTCA 3L 14752740 14752747 - 3L_14752740_14752747_- 0.630829658 0.630933946 0.630881802 7.37E-05 Trl FBtr0075707|FBtr0075706 14747927|14750240 14752905|14752905 3L - 14752726 14752795 5'utr Trl FlyBase G36795.1 ATAACAATCAGCAAACAAACAAATTCCCCGTGATCTGATCGAATGATTTGTGTTCATTTCCTGTATCATT 294 14752748 0.637609015 11 286 2205 0.971590909 2.534026106 0.09375 0.173469388 0.309659091 294 10 0 342 3L:14752726-14752795 8 Trl FBtr0075706|FBtr0075707 14750240|14747927 14752905|14752905 TGTGTTCA 8mer-A1 dme-miR-317-3p 3L - 14752723 14752828 5'utr Trl FlyBase G27776.1 AAAAAACATAACACTCACAAAAACGATTTGTAAATAACAATCAGCAAACAAACAAATTCCCCGTGATCTGATCGAATGATTTGTGTTCATTTCCTGTATCATTTTT 243 14752748 0.98289456 13 237 1790 0.975903614 2.209515015 0.135542169 0.308641975 0.493975904 243 7 1 324 3L:14752723-14752828 8 103.5 1505 FBgn0013263 1897.606667 85.71333333 130.6566667 0.054542388 1.207513417 0.792152461 1 1 1 0.2 dme-miR-970-3p 6mer3-8 TCTTAT 3L 14766593 14766598 + 3L_14766593_14766598_+ 0.999496715 0.999299319 0.999398017 0.000139583 CG9384 FBtr0333044|FBtr0075690 14765702|14765702 14767703|14767703 3L + 14766564 14766619 3'utr CG9384 FlyBase G30301.1 AGTGATTAAGAATCTCGAACCCGCTGAAATCTTATCGATCAATTAAGAATTAAGAA 7 14766596 0.975953937 5 6 34 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3L:14766564-14766619 6 CG9384 FBtr0333044|FBtr0075690 14765702|14765702 14767703|14767703 TCTTAT 6mer3-8 dme-miR-970-3p 3L + 14766563 14766601 3'utr CG9384 FlyBase G22917.1 AAGTGATTAAGAATCTCGAACCCGCTGAAATCTTATCGA 6 14766595 0.961214724 5 6 27 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 3L:14766563-14766601 6 4 1506 FBgn0036446 489.33 13.20333333 20.20333333 0.008174443 0.3029538 0.197987131 -3 -2 -2.5 0.2 dme-miR-308-3p 8mer-m1 CTGTGATT 3L 14766856 14766863 + 3L_14766856_14766863_+ 0.385552367 0.385329272 0.38544082 0.000157756 CG9384 FBtr0333044|FBtr0075690 14765702|14765702 14767703|14767703 3L + 14766816 14766875 3'utr CG9384 FlyBase G30302.2 ATTAAATAACGAAACGATTTTTAGCATTGTTGCTTTTTTACTGTGATTTGTTAATAATTT 49 14766863 0.696481717 10 47 614 0.966101695 1.755874856 0.152542373 0.163265306 0.305084746 49 2 0 57 3L:14766816-14766875 8 CG9384 FBtr0333044|FBtr0075690 14765702|14765702 14767703|14767703 CTGTGATT 8mer-m1 dme-miR-308-3p 3L + 14766830 14766874 3'utr CG9384 FlyBase G22920.1 CGATTTTTAGCATTGTTGCTTTTTTACTGTGATTTGTTAATAATT 37 14766863 0.715685298 10 37 474 1 1.681241237 0.104166667 0.216216216 0.395833333 37 0 0 48 3L:14766830-14766874 8 39 1507 FBgn0036446 489.33 13.20333333 20.20333333 0.079700815 2.953799546 1.930374526 -7 -7 -7 0.2 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 14800347 14800352 + 3L_14800347_14800352_+ 0.999999847 0.999999914 0.999999881 7.07E-08 CG9425 FBtr0075693 14799234 14801089 3L + 14800322 14800387 3'utr CG9425 FlyBase G30348.1 ATTTAAATTTGTGCACGAGTTATTTGTTCCTTTGCCCATCCGAAATTGTCGATGCATGTGTAAATT 15 14800346 0.771435887 9 15 148 1 1.255272505 0.222222222 0.2 0.333333333 15 0 0 18 3L:14800322-14800387 6 CG9425 FBtr0075693 14799234 14801089 GTTCCT 6mer2-7 dme-miR-276a-3p 3L + 14800300 14800379 3'utr CG9425 FlyBase G22943.1 TATATATAATATGCATATAAATATTTAAATTTGTGCACGAGTTATTTGTTCCTTTGCCCATCCGAAATTGTCGATGCATG 11 14800346 0.989355944 7 11 108 1 1.176091259 0.266666667 0.272727273 0.466666667 11 0 0 15 3L:14800300-14800379 6 8 1508 FBgn0036451 1200.986667 17.94333333 27.59666667 0.00666119 0.44584804 0.289890083 1 1 1 0.2 dme-miR-1008-3p 6mer2-7 GCTGTG 3L 1491256 1491261 - 3L_1491256_1491261_- 0.992507346 0.99976712 0.996137233 0.005133454 CG12084 FBtr0332656 1490949 1491753 3L - 1491224 1491289 3'utr CG12084 FlyBase G33306.1 ACGATGCTCACTTAACCCCCCCACATTTGCTGTGCTTTCGCATCACGAACCCAAGTAGCTGCAAGT 21 1491263 0.98295709 5 21 157 1 1.361727836 0.086956522 0.095238095 0.173913043 21 0 0 23 3L:1491224-1491289 6 CG12084 FBtr0332656 1490949 1491753 GCTGTG 6mer2-7 dme-miR-1008-3p 3L - 1491214 1491289 3'utr CG12084 FlyBase G25197.1 ACGATGCTCACTTAACCCCCCCACATTTGCTGTGCTTTCGCATCACGAACCCAAGTAGCTGCAAGTTCAGGATCGG 7 1491263 0.968399461 5 7 34 1 1 0 0.285714286 0.5 7 0 0 10 3L:1491214-1491289 6 11 1509 FBgn0043458 1091.493333 38.07666667 58.14666667 0.010077936 0.288890834 0.189176794 2 2 2 0.2 dme-miR-33-5p 6mer2-7 AATGCA 3L 14991399 14991404 + 3L_14991399_14991404_+ 0.880369402 0.85125432 0.865811861 0.020587485 mnd FBtr0075626|FBtr0114529|FBtr0075627 14991215|14991215|14991215 14991667|14991667|14991667 3L + 14991256 14991581 3'utr mnd FlyBase G30373.2 TGTGGATGTATCGATCAACGCAACTATAGAAGGGAATATCTTGTAGTTAGGATAAGTCTCAATTTACCCCTAAGATAGGTTAGCAACGCGAAATTTTGAAAACCTACGCACAACATTACAAAAGTGTTATTGTAAATAACTCAAATGCATTCTGGTAGGGAAGTCCCTGCTTCAATTAATATTATTTGTTAGTCGTACTTTTAATGTATATTTCAAACCCAAAAAAAATGAGTTCCTCGTCGAAAGCAGAAGTACGCCTGTTATACAAAATGCGAACCAATTTTTACATATTATACAAGTAATTAGGAGCTTATTCAGTAAGTAAT 210 14991404 0.972122629 38 194 1265 0.933609959 1.507084478 0.232365145 0.123809524 0.236514523 210 10 6 225 3L:14991256-14991581 6 mnd FBtr0114529|FBtr0075627|FBtr0075626 14991215|14991215|14991215 14991667|14991667|14991667 AATGCA 6mer2-7 dme-miR-33-5p 3L + 14991250 14991428 3'utr mnd FlyBase G22958.1 GCCTTTTGTGGATGTATCGATCAACGCAACTATAGAAGGGAATATCTTGTAGTTAGGATAAGTCTCAATTTACCCCTAAGATAGGTTAGCAACGCGAAATTTTGAAAACCTACGCACAACATTACAAAAGTGTTATTGTAAATAACTCAAATGCATTCTGGTAGGGAAGTCCCTGCTTC 70 14991405 0.976540047 21 67 431 0.971428571 2.008600172 0.180952381 0.314285714 0.542857143 70 3 0 102 3L:14991250-14991428 6 41 1510 FBgn0002778 691.1866667 34.75 53.52333333 0.059318274 1.179856115 0.76602105 -5 -6 -5.5 0.2 dme-miR-276a-3p 7mer-m8 AGTTCCT 3L 14991486 14991492 + 3L_14991486_14991492_+ 0.562611995 0.631271128 0.596941562 0.048549315 mnd FBtr0075626|FBtr0114529|FBtr0075627 14991215|14991215|14991215 14991667|14991667|14991667 3L + 14991256 14991581 3'utr mnd FlyBase G30373.2 TGTGGATGTATCGATCAACGCAACTATAGAAGGGAATATCTTGTAGTTAGGATAAGTCTCAATTTACCCCTAAGATAGGTTAGCAACGCGAAATTTTGAAAACCTACGCACAACATTACAAAAGTGTTATTGTAAATAACTCAAATGCATTCTGGTAGGGAAGTCCCTGCTTCAATTAATATTATTTGTTAGTCGTACTTTTAATGTATATTTCAAACCCAAAAAAAATGAGTTCCTCGTCGAAAGCAGAAGTACGCCTGTTATACAAAATGCGAACCAATTTTTACATATTATACAAGTAATTAGGAGCTTATTCAGTAAGTAAT 210 14991485 0.972122629 38 194 1265 0.933609959 1.507084478 0.232365145 0.123809524 0.236514523 210 10 6 225 3L:14991256-14991581 7 mnd FBtr0114529|FBtr0075627|FBtr0075626 14991215|14991215|14991215 14991667|14991667|14991667 AGTTCCT 7mer-m8 dme-miR-276a-3p 3L + 14991470 14991564 3'utr mnd FlyBase G22959.1 AAACCCAAAAAAAATGAGTTCCTCGTCGAAAGCAGAAGTACGCCTGTTATACAAAATGCGAACCAATTTTTACATATTATACAAGTAATTAGGAG 30 14991485 0.969287592 13 29 163 0.954545455 1.62324929 0.159090909 0.3 0.522727273 30 2 0 42 3L:14991470-14991564 7 32 1511 FBgn0002778 691.1866667 34.75 53.52333333 0.046297189 0.920863309 0.597870088 1 1 1 0.2 dme-miR-1006-3p 7mer-m8 CGAATTT 3L 14991621 14991627 + 3L_14991621_14991627_+ 0.645443071 0.661087887 0.653265479 0.011062544 mnd FBtr0075626|FBtr0114529|FBtr0075627 14991215|14991215|14991215 14991667|14991667|14991667 3L + 14991593 14991645 3'utr mnd FlyBase G30374.1 ATGCAACTTTTTGCGAAATGTAAAAAATCGAATTTGTTTTGTATAAGAAAGTT 33 14991620 0.929422371 4 30 308 0.947368421 1.556302501 0.184210526 0.121212121 0.236842105 33 2 0 36 3L:14991593-14991645 7 mnd FBtr0114529|FBtr0075627|FBtr0075626 14991215|14991215|14991215 14991667|14991667|14991667 CGAATTT 7mer-m8 dme-miR-1006-3p 3L + 14991593 14991641 3'utr mnd FlyBase G22960.1 ATGCAACTTTTTGCGAAATGTAAAAAATCGAATTTGTTTTGTATAAGAA 12 14991620 0.986979778 3 11 96 1 1.230448921 0.294117647 0.25 0.470588235 12 0 0 17 3L:14991593-14991641 7 21 1512 FBgn0002778 691.1866667 34.75 53.52333333 0.030382531 0.604316547 0.392352245 1 1 1 0.2 dme-miR-263a-5p 6mer3-8 GTGCCA 3L 15001765 15001770 - 3L_15001765_15001770_- 0.944375239 0.918279146 0.931327192 0.018452729 Reck FBtr0333876|FBtr0075671 15001236|15001236 15001821|15001821 3L - 15001687 15001958 stop_codon Reck FlyBase G36876.1 CAACCAATCTAGCTCTATCCTGTTTGACAGTATCGCATCTACTAGAACCCACGCCAAATGGAGCTACATCTTATGGTCCCCACGCCATTTGGATACTCCCCTTACTTTTGTTAGTTTCTAGAGTAATCATAGCTTAAGATAGTCCTAGAAGGAGTGTGTATGATCTGACTCAATCAAGTGAATTCTTGGTGCCAATTAACCCGTTATTCTAAGGAGATGGAAAGTGCCTTCAACTGTAAGGAATTGACCCTCTGTACCATGTGATATTAGCT 499 15001773 0.998993863 52 457 3673 0.92092257 1.349471799 0.179571664 0.176352705 0.322899506 499 24 24 559 3L:15001687-15001958 6 Reck FBtr0333876|FBtr0075671 15001236|15001236 15001821|15001821 GTGCCA 6mer3-8 dme-miR-263a-5p 3L - 15001687 15001834 stop_codon Reck FlyBase G27837.1 AATCATAGCTTAAGATAGTCCTAGAAGGAGTGTGTATGATCTGACTCAATCAAGTGAATTCTTGGTGCCAATTAACCCGTTATTCTAAGGAGATGGAAAGTGCCTTCAACTGTAAGGAATTGACCCTCTGTACCATGTGATATTAGCT 350 15001773 0.781999025 34 310 2550 0.877862595 0.990659974 0.185114504 0.365714286 0.576335878 350 18 46 460 3L:15001687-15001834 6 193.5 1513 FBgn0036463 378 10.74666667 16.56333333 0.511904762 18.00558313 11.68243107 3 3 3 0.2 dme-miR-79-3p 8mer-A1 TAGCTTTA 3L 1503362 1503369 - 3L_1503362_1503369_- 0.585384522 0.588823685 0.587104104 0.002431882 cue FBtr0072706 1503224 1503826 3L - 1503313 1503407 3'utr cue FlyBase G33337.2 CGTCATGTTGAAATGAATGCAAGTCGCGCGACTGACATTAGCTTTAAAAACGGATTACGCGGCCGCAAGACCATTGCGATTGTGATGATTGCATC 780 1503370 0.786645013 13 768 4364 0.988184748 2.662757832 0.383458647 0.158974359 0.29538131 780 10 1 920 3L:1503313-1503407 8 cue FBtr0072706 1503224 1503826 TAGCTTTA 8mer-A1 dme-miR-79-3p 3L - 1503298 1503417 3'utr cue FlyBase G25215.1 ACTTTGAATACGTCATGTTGAAATGAATGCAAGTCGCGCGACTGACATTAGCTTTAAAAACGGATTACGCGGCCGCAAGACCATTGCGATTGTGATGATTGCATCCGGATCTGTTGTAAT 598 1503370 0.968722558 20 589 3253 0.988358556 2.92890769 0.339930151 0.339464883 0.54016298 598 10 0 849 3L:1503298-1503417 8 658.5 1514 FBgn0011204 1050.61 45.31 69.18333333 0.626778729 14.53321563 9.518188388 1 1 1 0.2 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3L 1503555 1503561 - 3L_1503555_1503561_- 0.622488382 0.720066465 0.671277424 0.068998136 cue FBtr0072706|FBtr0072706 1503224|1503224 1503826|1503826 3L - 1503543 1503730 3'utr cue FlyBase G33338.2 AAGCTGCTGCCCGCCCGGCCCTCGACCCCGTTAGCCGCCAAGGTGCTCGCCCAGGCAACCAGCAACTAGAAACCAATTACCAACCAGCCACAGCAATGTGCAACCAGCAACAGCAGCCTAATACTTAACACTCGCCTGGGACACTTAACACTCGCCAAACCAAACCATTTACTTAAGCCGAAGCAACA 128 1503563 0.840186522 20 119 458 0.939597315 1.544068044 0.073825503 0.140625 0.261744966 128 6 3 140 3L:1503543-1503730 7 cue FBtr0072706|FBtr0072706 1503224|1503224 1503826|1503826 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3L - 1503546 1503615 3'utr cue FlyBase G25217.1 GCCTAATACTTAACACTCGCCTGGGACACTTAACACTCGCCAAACCAAACCATTTACTTAAGCCGAAGCA 47 1503563 0.802760007 12 43 197 0.929577465 1.342422681 0.042253521 0.425531915 0.61971831 47 3 2 66 3L:1503546-1503615 7 42 1515 FBgn0011204 1050.61 45.31 69.18333333 0.039976775 0.926947694 0.607082631 2 2 2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 1503773 1503779 - 3L_1503773_1503779_- 0.699387574 0.733560168 0.716473871 0.024163677 cue FBtr0072706|FBtr0072706|FBtr0072706 1503224|1503224|1503224 1503826|1503826|1503826 3L - 1503731 1503811 3'utr cue FlyBase G33339.1 CGGACATCCACCTGCGCCTCAAAACTGAACCTTGTGATAGTCGTCGTCGTCGAGTGCGGATTTGGTGTATTCGAGCTTGAA 607 1503780 0.795159161 16 570 4303 0.946478873 1.526339277 0.123943662 0.140032949 0.264788732 607 19 19 672 3L:1503731-1503811 7 cue FBtr0072706|FBtr0072706|FBtr0072706 1503224|1503224|1503224 1503826|1503826|1503826 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 1503745 1503867 stop_codon cue FlyBase G25219.1 AGAAGATACTCATCCACAACATGGAGGATGACCTGTACTAGGGCGCGACGGACGGACGGACATCCACCTGCGCCTCAAAACTGAACCTTGTGATAGTCGTCGTCGTCGAGTGCGGATTTGGTG 416 1503780 0.982078088 20 389 2872 0.93533123 1.411326857 0.140378549 0.360576923 0.58044164 416 19 22 593 3L:1503745-1503867 7 493 1516 FBgn0011204 1050.61 45.31 69.18333333 0.469251197 10.88060031 7.125993736 1 1 1 0.2 dme-miR-14-3p 6mer3-8 AAGACT 3L 15090878 15090883 - 3L_15090878_15090883_- 0.999442049 0.999890599 0.999666324 0.000317208 CG6945 FBtr0075657 15090821 15091353 3L - 15090868 15090924 5'utr CG6945 FlyBase G36900.1 AATATACCGATTGGATACTGATATATTCACCGAGTTTTCTTAAGACTAACTACCGAC 18 15090885 0.691128991 9 16 133 0.904761905 1.278753601 0.380952381 0.166666667 0.285714286 18 2 0 19 3L:15090868-15090924 6 CG6945 FBtr0075657 15090821 15091353 AAGACT 6mer3-8 dme-miR-14-3p 3L - 15090857 15090926 5'utr CG6945 FlyBase G27861.1 TGAATATACCGATTGGATACTGATATATTCACCGAGTTTTCTTAAGACTAACTACCGACAAGCAATAACA 7 15090885 0.979085478 6 7 53 1 1 0.3 0.142857143 0.4 7 0 0 10 3L:15090857-15090926 6 7 1517 FBgn0036476 404.2866667 17.14 26.23666667 0.017314447 0.4084014 0.266802185 2 2 2 0.2 dme-bantam-3p 8mer-A1 TGATCTCA 3L 15127543 15127550 + 3L_15127543_15127550_+ 0.630026493 0.576478664 0.603252578 0.037864012 Cep135 FBtr0333853 15127334 15128029 3L + 15127488 15127572 3'utr Cep135 FlyBase G30414.1 TGCGCGATGAGCTTCAGCAGAGCTTGGCCATTAATCAGGTCACCAACGAAACCACTGATCTCATGCTCGGGCGCTTGCACAATGA 109 15127551 0.95625757 7 107 502 0.983870968 1.785329835 0.274193548 0.128440367 0.233870968 109 1 1 122 3L:15127488-15127572 8 Cep135 FBtr0333853 15127334 15128029 TGATCTCA 8mer-A1 dme-bantam-3p 3L + 15127524 15127570 3'utr Cep135 FlyBase G22997.1 AGGTCACCAACGAAACCACTGATCTCATGCTCGGGCGCTTGCACAAT 68 15127551 0.703646431 4 67 324 0.990825688 1.73239376 0.211009174 0.411764706 0.633027523 68 0 1 108 3L:15127524-15127570 8 88 1518 FBgn0036480 383.3666667 13.55333333 20.77666667 0.229545257 6.492867683 4.235520616 -8 -8 -8 0.2 dme-bantam-3p 6mer3-8 TGATCT 3L 15131749 15131754 - 3L_15131749_15131754_- 0.559973818 0.505233675 0.532603747 0.038707096 CG12316 FBtr0075651|FBtr0075652 15131506|15131506 15131804|15131804 3L - 15131699 15131822 stop_codon CG12316 FlyBase G36906.1 TCGAAGGATTTAGTTTAGGATCTCCCCACACAGACCAGTTGTAGTTCCAGTTGCCGATCCAATCCCATTGATCTTGGCCTGCAATAGTATTTGTATTATTTTTTTGAAGAAACGTCTGTAAAAC 86 15131755 0.838501485 18 78 575 0.911764706 1.366422957 0.117647059 0.186046512 0.31372549 86 6 3 93 3L:15131699-15131822 6 CG12316 FBtr0075652|FBtr0075651 15131506|15131506 15131804|15131804 TGATCT 6mer3-8 dme-bantam-3p 3L - 15131699 15131812 stop_codon CG12316 FlyBase G27865.1 TAGTTTAGGATCTCCCCACACAGACCAGTTGTAGTTCCAGTTGCCGATCCAATCCCATTGATCTTGGCCTGCAATAGTATTTGTATTATTTTTTTGAAGAAACGTCTGTAAAAC 54 15131755 0.846206634 15 45 383 0.891566265 1.392110465 0.156626506 0.425925926 0.626506024 54 7 2 74 3L:15131699-15131812 6 46 1519 FBgn0036483 307.04 9.166666667 14.16333333 0.149817613 5.018181818 3.247823017 1 1 1 0.2 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 15154579 15154586 - 3L_15154579_15154586_- 0.635562875 0.635741734 0.635652304 0.000126431 Msh6 FBtr0075646 15154231 15154664 3L - 15154444 15154614 3'utr Msh6 FlyBase G36934.1 AAACATGTTTACTTATGATTCGCCAAGAGGCAGCTATGCTGGAATTTGATGTATACGAAGCTTTTTAAGACTTTTTCACCATTTCAGTATGCATTTTTTTTGTAGTTTTTATAAGGAATTTGAATCAAAACCTGTGCCATTCTCAACATTCTCAATTAAGCAAAATGGAAC 117 15154578 0.980341138 26 103 853 0.881118881 2.100370545 0.083916084 0.205128205 0.34965035 117 17 0 126 3L:15154444-15154614 8 Msh6 FBtr0075646 15154231 15154664 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L - 15154467 15154610 3'utr Msh6 FlyBase G27890.1 ATGTTTACTTATGATTCGCCAAGAGGCAGCTATGCTGGAATTTGATGTATACGAAGCTTTTTAAGACTTTTTCACCATTTCAGTATGCATTTTTTTTGTAGTTTTTATAAGGAATTTGAATCAAAACCTGTGCCATTCTCAACA 90 15154596 0.887134801 20 86 592 0.944444444 2.075546961 0.126984127 0.3 0.5 90 7 0 119 3L:15154467-15154610 8 52.5 1520 FBgn0036486 1407.773333 41.68666667 63.93666667 0.037292935 1.25939549 0.821125072 -8 10 1 0.2 dme-miR-282-5p 7mer-A1 GAGGCTA 3L 15154638 15154644 - 3L_15154638_15154644_- 0.741848995 0.732641811 0.737245403 0.006510474 Msh6 FBtr0075646 15154231 15154664 3L - 15154629 15154666 stop_codon Msh6 FlyBase G36935.1 AGGGTGCAGAAGCTCCAAAGTTGAGGCTACCAGACACC 46 15154645 0.722163575 2 44 143 0.945454545 1.414973348 0.109090909 0.173913043 0.309090909 46 2 1 52 3L:15154629-15154666 7 Msh6 FBtr0075646 15154231 15154664 GAGGCTA 7mer-A1 dme-miR-282-5p 3L - 15154621 15154657 3'utr Msh6 FlyBase G27891.1 AAGCTCCAAAGTTGAGGCTACCAGACACCATTTCCCA 20 15154646 0.906806879 2 20 63 1 1.568201724 0 0.55 0.756756757 20 0 0 37 3L:15154621-15154657 7 33 1521 FBgn0036486 1407.773333 41.68666667 63.93666667 0.023441274 0.791620022 0.516135759 1 2 1.5 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 3L 1522942 1522948 + 3L_1522942_1522948_+ 0.540431848 0.54988119 0.545156519 0.006681735 Psa FBtr0072700|FBtr0072697|FBtr0072701|FBtr0306557|FBtr0072702|FBtr0072699|FBtr0072698|FBtr0333395 1522918|1522918|1522918|1522918|1522918|1522918|1522918|1522918 1523380|1523380|1523380|1523380|1523380|1523380|1523380|1523380 3L + 1522905 1523042 stop_codon Psa FlyBase G27115.1 AGGGATGACCAATAAACGTTATTGCGCTCGCCAGCATACCAAAGCATTTAACAACAATCACCAGCAGTGTAACCACAGCAACAGCAACGCCAACGCAGCACCATCATCAGCACCAGTAACCCGTAACCAGGTCATCGT 35 1522941 0.961506541 9 34 124 1 1.579783597 0.131578947 0.057142857 0.131578947 35 0 0 38 3L:1522905-1523042 7 Psa FBtr0072698|FBtr0333395|FBtr0072702|FBtr0072699|FBtr0072701|FBtr0306557|FBtr0072700|FBtr0072697 1522918|1522918|1522918|1522918|1522918|1522918|1522918|1522918 1523380|1523380|1523380|1523380|1523380|1523380|1523380|1523380 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 1522918 1522958 stop_codon Psa FlyBase G20523.1 AAACGTTATTGCGCTCGCCAGCATACCAAAGCATTTAACAA 8 1522941 0.925001087 3 6 27 0.692307692 0.954242509 0 0.625 0.769230769 8 4 0 9 3L:1522918-1522958 7 11.5 1522 FBgn0261243 1862.84 60.46333333 92.53333333 0.00617337 0.190197916 0.124279539 1 1 1 0.2 dme-miR-968-5p 6mer3-8 ACTACT 3L 1523208 1523213 + 3L_1523208_1523213_+ 0.755376347 0.682820791 0.719098569 0.051304486 Psa FBtr0072700|FBtr0072697|FBtr0072701|FBtr0306557|FBtr0072702|FBtr0072699|FBtr0072698|FBtr0333395 1522918|1522918|1522918|1522918|1522918|1522918|1522918|1522918 1523380|1523380|1523380|1523380|1523380|1523380|1523380|1523380 3L + 1523114 1523222 3'utr Psa FlyBase G27116.1 GTACTCCTAAAGATGAGAGCCAAATAGGTTAGCTTTAGTCAAGGATCCACCTACAGCCACTGCTCCAACCGGGCGTGCTTACATATATCGATTGACTACTCGCCCCAGC 40 1523205 0.948908266 10 40 215 1 1.69019608 0.285714286 0.15 0.306122449 40 0 0 49 3L:1523114-1523222 6 Psa FBtr0072698|FBtr0333395|FBtr0072702|FBtr0072699|FBtr0072701|FBtr0306557|FBtr0072700|FBtr0072697 1522918|1522918|1522918|1522918|1522918|1522918|1522918|1522918 1523380|1523380|1523380|1523380|1523380|1523380|1523380|1523380 ACTACT 6mer3-8 dme-miR-968-5p 3L + 1523173 1523223 3'utr Psa FlyBase G20525.1 CTGCTCCAACCGGGCGTGCTTACATATATCGATTGACTACTCGCCCCAGCA 13 1523205 0.968175557 5 13 76 1 1.397940009 0.16 0.461538462 0.72 13 0 0 25 3L:1523173-1523223 6 17 1523 FBgn0261243 1862.84 60.46333333 92.53333333 0.009125851 0.281162137 0.183717579 3 3 3 0.2 dme-miR-14-3p 6mer2-7 AGACTG 3L 15242280 15242285 + 3L_15242280_15242285_+ 0.992734276 0.998984377 0.995859326 0.004419488 Tollo FBtr0075607 15240160 15242832 3L + 15242260 15242297 3'utr Tollo FlyBase G30437.1 TAGAAGGATTCACTTGGTTTAGACTGTAAAGAGTTAAA 15 15242278 0.683931682 5 14 114 0.944444444 1.230448921 0.166666667 0.2 0.333333333 15 1 0 17 3L:15242260-15242297 6 Tollo FBtr0075607 15240160 15242832 AGACTG 6mer2-7 dme-miR-14-3p 3L + 15242261 15242298 3'utr Tollo FlyBase G23014.1 AGAAGGATTCACTTGGTTTAGACTGTAAAGAGTTAAAT 13 15242278 0.656065455 5 12 93 0.916666667 1.342422681 0.291666667 0.615384615 0.791666667 13 2 0 22 3L:15242261-15242298 6 14 1524 FBgn0029114 1018.113333 17.04 26.18666667 0.013750925 0.821596244 0.534623218 2 2 2 0.2 dme-miR-283-5p 8mer-m1 TGATATTT 3L 15242345 15242352 + 3L_15242345_15242352_+ 0.501943496 0.466867858 0.484405677 0.024802195 Tollo FBtr0075607 15240160 15242832 3L + 15242323 15242370 3'utr Tollo FlyBase G30438.1 ACGTTTATTTGTTTAATCATTGTGATATTTTGTTTTATCAATAAGTCC 63 15242342 0.69995681 13 57 841 0.923076923 1.158362492 0.243589744 0.174603175 0.333333333 63 2 4 72 3L:15242323-15242370 8 Tollo FBtr0075607 15240160 15242832 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 15242323 15242362 3'utr Tollo FlyBase G23015.1 ACGTTTATTTGTTTAATCATTGTGATATTTTGTTTTATCA 39 15242341 0.708563098 8 37 484 0.921875 1.770852012 0.140625 0.41025641 0.640625 39 5 0 59 3L:15242323-15242362 8 51 1525 FBgn0029114 1018.113333 17.04 26.18666667 0.050092655 2.992957746 1.947556008 3 4 3.5 0.2 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 1535130 1535136 - 3L_1535130_1535136_- 0.816449721 0.823349492 0.819899607 0.004878895 CG12091 FBtr0333400|FBtr0072831 1534927|1535010 1535595|1535595 3L - 1535077 1535180 3'utr CG12091 FlyBase G33360.1 TGGAAGCTGGATGGATGGTGGACCCGGAATGGAGCGAGTCGAGTGCAGCTATCTGACTGAGGACGGAGGATTACCCATTTACGCGGGCGAACGAACTGTCTTTA 30 1535129 0.777278922 13 24 135 0.846153846 0.916453949 0.307692308 0.266666667 0.435897436 30 3 3 33 3L:1535077-1535180 7 CG12091 FBtr0072831|FBtr0333400 1535010|1534927 1535595|1535595 GCAGCTA 7mer-A1 dme-miR-980-3p 3L - 1535035 1535182 3'utr CG12091 FlyBase G25231.1 GATGGAAGCTGGATGGATGGTGGACCCGGAATGGAGCGAGTCGAGTGCAGCTATCTGACTGAGGACGGAGGATTACCCATTTACGCGGGCGAACGAACTGTCTTTAAACAATTTTTGTCGAAATGTACTCACTGATATTTGCGACCCA 36 1535137 0.92588976 13 31 162 0.854166667 1.612783857 0.416666667 0.222222222 0.416666667 36 7 0 41 3L:1535035-1535182 7 20 1526 FBgn0035228 678.3333333 45.40666667 69.66333333 0.029484029 0.440463955 0.287095076 -7 1 -3 0.2 dme-miR-13b-2-5p 7mer-A1 TTGACGA 3L 1535458 1535464 - 3L_1535458_1535464_- 0.548510231 0.598793765 0.573651998 0.035555875 CG12091 FBtr0333400|FBtr0072831 1534927|1535010 1535595|1535595 3L - 1535415 1535624 stop_codon CG12091 FlyBase G33363.1 CCGTTGTCCTGGCCACCGTGGCGATGTGAGAGTGGTGCTCCAGCCCATCCTCCCTAGTGATTAACGTTTACTTGTAGTCCGTACGTGTTTAGTTAGCTTTAGGAGCCAGTTTCGTGGTTCTGTCTACCGTTTAAGCTGCATGTTGAGATTGAGATTGTGATTGACGAGGACGACGACCCTTTGACCCTTTGCATTGTTAGTTACATATAT 459 1535470 0.817845686 34 445 3211 0.969811321 1.932811869 0.581132075 0.139433551 0.254716981 459 11 5 514 3L:1535415-1535624 7 CG12091 FBtr0072831|FBtr0333400 1535010|1534927 1535595|1535595 TTGACGA 7mer-A1 dme-miR-13b-2-5p 3L - 1535423 1535583 3'utr CG12091 FlyBase G25234.1 AGCCCATCCTCCCTAGTGATTAACGTTTACTTGTAGTCCGTACGTGTTTAGTTAGCTTTAGGAGCCAGTTTCGTGGTTCTGTCTACCGTTTAAGCTGCATGTTGAGATTGAGATTGTGATTGACGAGGACGACGACCCTTTGACCCTTTGCATTGTTAGTT 352 1535470 0.805250796 24 351 2442 0.998123827 2.424881637 0.544090056 0.352272727 0.572232645 352 0 1 532 3L:1535423-1535583 7 209 1527 FBgn0035228 678.3333333 45.40666667 69.66333333 0.308108108 4.602848334 3.000143548 6 6 6 0.2 dme-miR-79-3p 8mer-A1 TAGCTTTA 3L 1535524 1535531 - 3L_1535524_1535531_- 0.402110989 0.495072537 0.448591763 0.065733707 CG12091 FBtr0333400|FBtr0072831 1534927|1535010 1535595|1535595 3L - 1535415 1535624 stop_codon CG12091 FlyBase G33363.1 CCGTTGTCCTGGCCACCGTGGCGATGTGAGAGTGGTGCTCCAGCCCATCCTCCCTAGTGATTAACGTTTACTTGTAGTCCGTACGTGTTTAGTTAGCTTTAGGAGCCAGTTTCGTGGTTCTGTCTACCGTTTAAGCTGCATGTTGAGATTGAGATTGTGATTGACGAGGACGACGACCCTTTGACCCTTTGCATTGTTAGTTACATATAT 459 1535532 0.817845686 34 445 3211 0.969811321 1.932811869 0.581132075 0.139433551 0.254716981 459 11 5 514 3L:1535415-1535624 8 CG12091 FBtr0072831|FBtr0333400 1535010|1534927 1535595|1535595 TAGCTTTA 8mer-A1 dme-miR-79-3p 3L - 1535423 1535583 3'utr CG12091 FlyBase G25234.1 AGCCCATCCTCCCTAGTGATTAACGTTTACTTGTAGTCCGTACGTGTTTAGTTAGCTTTAGGAGCCAGTTTCGTGGTTCTGTCTACCGTTTAAGCTGCATGTTGAGATTGAGATTGTGATTGACGAGGACGACGACCCTTTGACCCTTTGCATTGTTAGTT 352 1535532 0.805250796 24 351 2442 0.998123827 2.424881637 0.544090056 0.352272727 0.572232645 352 0 1 532 3L:1535423-1535583 8 128 1528 FBgn0035228 678.3333333 45.40666667 69.66333333 0.188697789 2.818969314 1.837408488 1 1 1 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 3L 1544622 1544629 + 3L_1544622_1544629_+ 0.643371939 0.643537732 0.643454836 0.000117238 CG7852 FBtr0072736|FBtr0072737|FBtr0072735 1544074|1541507|1544074 1544823|1544823|1544823 3L + 1544600 1544641 3'utr CG7852 FlyBase G27133.1 AGCTTTTAGTTTAGTTGATTTTACCAAAGAATCTTTGTTTTT 20 1544621 0.838294311 4 19 209 0.954545455 1.021189299 0 0.1 0.181818182 20 0 1 21 3L:1544600-1544641 8 CG7852 FBtr0072737|FBtr0072735|FBtr0072736 1541507|1544074|1544074 1544823|1544823|1544823 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 1544612 1544634 3'utr CG7852 FlyBase G20537.1 AGTTGATTTTACCAAAGAATCTT 5 1544621 0.724904695 3 5 28 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3L:1544612-1544634 8 12 1529 FBgn0035229 480 10.39 15.81 0.025 1.154956689 0.759013283 1 1 1 0.2 dme-miR-307a-3p 6mer3-8 GGTTGT 3L 15503460 15503465 + 3L_15503460_15503465_+ 0.867436047 0.993782258 0.930609152 0.089340326 CG7272 FBtr0075548 15503417 15503769 3L + 15503413 15503479 stop_codon CG7272 FlyBase G30466.1 AAATAATTGAAATCGAACGCTTTACCTAGAAAAAAGGACAAATAATGGGTTGTTGCAACAACATTAC 34 15503435 0.942142138 13 28 157 0.860465116 1.091080469 0.162790698 0.264705882 0.418604651 34 4 2 37 3L:15503413-15503479 6 CG7272 FBtr0075548 15503417 15503769 GGTTGT 6mer3-8 dme-miR-307a-3p 3L + 15503417 15503473 stop_codon CG7272 FlyBase G23035.1 AATTGAAATCGAACGCTTTACCTAGAAAAAAGGACAAATAATGGGTTGTTGCAACAA 20 15503463 0.723834527 8 17 93 0.884615385 1.361727836 0.115384615 0.2 0.384615385 20 3 0 23 3L:15503417-15503473 6 10 1530 FBgn0036501 774.8233333 80.60666667 124.19 0.012906168 0.124059218 0.080521781 25 -3 11 0.2 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 15510691 15510696 + 3L_15510691_15510696_+ 0.966133019 0.999997448 0.983065233 0.023945747 gdl-ORF39 FBtr0091756 15509667 15510837 3L + 15510671 15510706 3'utr gdl-ORF39 FlyBase G30469.1 AAGGAGATAAAAATACAAATGTTCCTGTTGGACTTC 9 15510690 0.971506622 3 9 62 1 1.204119983 0.5625 0.444444444 0.6875 9 0 0 16 3L:15510671-15510706 6 gdl-ORF39 FBtr0091756 15509667 15510837 GTTCCT 6mer2-7 dme-miR-276a-3p 3L + 15510672 15510705 3'utr gdl-ORF39 FlyBase G23037.1 AGGAGATAAAAATACAAATGTTCCTGTTGGACTT 6 15510690 0.963257686 3 6 40 1 1.041392685 0.818181818 0.666666667 0.818181818 6 0 0 11 3L:15510672-15510705 6 7.5 1531 FBgn0028377 16.80333333 2.22 3.413333333 0.446340012 3.378378378 2.197265625 1 1 1 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 3L 15510787 15510792 + 3L_15510787_15510792_+ 0.890911773 0.675851651 0.783381712 0.152070455 gdl-ORF39 FBtr0091756 15509667 15510837 3L + 15510737 15510816 3'utr gdl-ORF39 FlyBase G30470.1 CCCGGCAAATAACAGTTAGTCCACAATCCGGAGAACACAAAAGACTGCACTTGACTTGTTCAAATTAGAATATTAAAGGC 24 15510792 0.986692301 9 22 184 0.888888889 0.903089987 0.222222222 0.125 0.222222222 24 1 2 24 3L:15510737-15510816 6 gdl-ORF39 FBtr0091756 15509667 15510837 TTGACT 6mer3-8 dme-miR-1012-3p 3L + 15510753 15510815 3'utr gdl-ORF39 FlyBase G23038.1 TAGTCCACAATCCGGAGAACACAAAAGACTGCACTTGACTTGTTCAAATTAGAATATTAAAGG 20 15510793 0.989813305 6 17 164 0.888888889 1.204119983 0.194444444 0.45 0.694444444 20 3 1 32 3L:15510753-15510815 6 20 1532 FBgn0028377 16.80333333 2.22 3.413333333 1.190240032 9.009009009 5.859375 -5 -6 -5.5 0.2 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 15552118 15552123 + 3L_15552118_15552123_+ 0.979288036 0.991127734 0.985207885 0.008371932 CrebA FBtr0075558 15551273 15553214 3L + 15552057 15552134 3'utr CrebA FlyBase G30493.2 TGAATGAATTAACGAAAGACTCCCGGAGCTCAATCTCTGTGCTGTCTTTGGCATGACTATTGTTCCTTTAAACGATAT 37 15552116 0.770716109 14 32 288 0.895833333 1.156347201 0.1875 0.27027027 0.4375 37 3 2 43 3L:15552057-15552134 6 CrebA FBtr0075558 15551273 15553214 GTTCCT 6mer2-7 dme-miR-276a-3p 3L + 15552072 15552141 3'utr CrebA FlyBase G23064.1 AAGACTCCCGGAGCTCAATCTCTGTGCTGTCTTTGGCATGACTATTGTTCCTTTAAACGATATTTCTCAA 28 15552117 0.713180509 8 27 242 0.956521739 1.643452676 0.304347826 0.428571429 0.652173913 28 2 0 44 3L:15552072-15552141 6 20 1533 FBgn0004396 2312.63 76.99666667 118.8566667 0.008648162 0.259751504 0.168269905 2 1 1.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3L 15552667 15552672 + 3L_15552667_15552672_+ 0.995957062 0.99949695 0.997727006 0.002503017 CrebA FBtr0075558 15551273 15553214 3L + 15552642 15552765 3'utr CrebA FlyBase G30495.1 TTTCGCAGCGTTCTAAATGAGTCATTCTAGTTTTTATTAGTTGAATTTATAAACACAAAATTACTTAACGGAAATTTCAAGCGTAACCCGTTGATTTCCTATCAACTCGATAATATGTATCTAT 99 15552666 0.909863664 15 96 907 0.965517241 2.049218023 0.120689655 0.151515152 0.275862069 99 4 0 112 3L:15552642-15552765 6 CrebA FBtr0075558 15551273 15553214 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 15552637 15552870 3'utr CrebA FlyBase G23067.1 ATTCTTTTCGCAGCGTTCTAAATGAGTCATTCTAGTTTTTATTAGTTGAATTTATAAACACAAAATTACTTAACGGAAATTTCAAGCGTAACCCGTTGATTTCCTATCAACTCGATAATATGTATCTATAAAATATAATTTAGCTATTTCTACGTATGTCTGTGCATGTGTGTATAAATCAAGCGGGCGAAGTTGTGCAATTGTTAGAAAATTTTTAAAAGAAAGATATTTAGT 60 15552666 0.988255138 17 52 472 0.873563218 1.579783597 0.310344828 0.333333333 0.540229885 60 10 1 76 3L:15552637-15552870 6 43 1534 FBgn0004396 2312.63 76.99666667 118.8566667 0.018593549 0.558465734 0.361780296 1 1 1 0.2 dme-miR-92b-3p 8mer-m1 GTGCAATT 3L 15552831 15552838 + 3L_15552831_15552838_+ 0.596637992 0.425030093 0.510834042 0.12134511 CrebA FBtr0075558 15551273 15553214 3L + 15552773 15552847 3'utr CrebA FlyBase G30496.1 AATTTAGCTATTTCTACGTATGTCTGTGCATGTGTGTATAAATCAAGCGGGCGAAGTTGTGCAATTGTTAGAAAA 19 15552830 0.736639603 10 19 156 1 1.342422681 0.181818182 0.105263158 0.227272727 19 0 0 22 3L:15552773-15552847 8 CrebA FBtr0075558 15551273 15553214 GTGCAATT 8mer-m1 dme-miR-92b-3p 3L + 15552637 15552870 3'utr CrebA FlyBase G23067.1 ATTCTTTTCGCAGCGTTCTAAATGAGTCATTCTAGTTTTTATTAGTTGAATTTATAAACACAAAATTACTTAACGGAAATTTCAAGCGTAACCCGTTGATTTCCTATCAACTCGATAATATGTATCTATAAAATATAATTTAGCTATTTCTACGTATGTCTGTGCATGTGTGTATAAATCAAGCGGGCGAAGTTGTGCAATTGTTAGAAAATTTTTAAAAGAAAGATATTTAGT 60 15552830 0.988255138 17 52 472 0.873563218 1.579783597 0.310344828 0.333333333 0.540229885 60 10 1 76 3L:15552637-15552870 8 11 1535 FBgn0004396 2312.63 76.99666667 118.8566667 0.004756489 0.142863327 0.092548448 1 1 1 0.2 dme-miR-92b-3p 7mer-m8 GTGCAAT 3L 15552915 15552921 + 3L_15552915_15552921_+ 0.658712486 0.636580703 0.647646594 0.015649546 CrebA FBtr0075558 15551273 15553214 3L + 15552884 15552929 3'utr CrebA FlyBase G30497.1 TCAGAAATCGATGTTGAAAAACAAAACGCTCGTGCAATGACAAACA 9 15552920 0.994317008 3 9 30 1 0.954242509 0.222222222 0 0 9 0 0 9 3L:15552884-15552929 7 CrebA FBtr0075558 15551273 15553214 GTGCAAT 7mer-m8 dme-miR-92b-3p 3L + 15552886 15553030 3'utr CrebA FlyBase G23068.1 AGAAATCGATGTTGAAAAACAAAACGCTCGTGCAATGACAAACAAAATTTTATTAATAAAGCGTTAAACAAACAAATTAAAGACAACATGAAATATACATTATGATATATTTATATATACAAGTATGAATAATGTACGACTATTT 16 15552920 0.984123635 11 15 76 0.961538462 1.397940009 0.230769231 0.4375 0.653846154 16 1 0 25 3L:15552886-15553030 7 6 1536 FBgn0004396 2312.63 76.99666667 118.8566667 0.002594449 0.077925451 0.050480971 -5 -5 -5 0.2 dme-miR-92b-3p 8mer-m1 GTGCAATT 3L 15553173 15553180 + 3L_15553173_15553180_+ 0.348973527 0.373662821 0.361318174 0.017457971 CrebA FBtr0075558 15551273 15553214 3L + 15553129 15553193 3'utr CrebA FlyBase G30499.1 GTAAAACTTTTATGATTGGTTGCTGTAATTTGGCAAAAGTAAAAGTGCAATTCCAAATAAAATTC 11 15553179 0.965474209 3 9 53 0.923076923 1.079181246 0.230769231 0.2 0.384615385 10 1 0 12 3L:15553129-15553193 8 CrebA FBtr0075558 15551273 15553214 GTGCAATT 8mer-m1 dme-miR-92b-3p 3L + 15553169 15553199 3'utr CrebA FlyBase G23069.2 AAAAGTGCAATTCCAAATAAAATTCAAACAA 8 15553179 0.766985485 2 6 31 0.777777778 0.84509804 0.222222222 0.125 0.222222222 8 2 0 7 3L:15553169-15553199 8 7.5 1537 FBgn0004396 2312.63 76.99666667 118.8566667 0.003243061 0.097406814 0.063101214 -6 -6 -6 0.2 dme-miR-970-3p 7mer-A1 CTTATGA 3L 1555544 1555550 - 3L_1555544_1555550_- 0.823229752 0.823306199 0.823267976 5.40E-05 CG12099 FBtr0072829|FBtr0072828 1555361|1555361 1555568|1555568 3L - 1555526 1555569 stop_codon CG12099 FlyBase G33371.1 AAGAGCTAGATGATGATCGCTTATGAAGTTACAAGATTTATTGT 10 1555556 0.972331617 6 10 61 1 1.176091259 0.466666667 0.4 0.6 10 0 0 15 3L:1555526-1555569 7 CG12099 FBtr0072828|FBtr0072829 1555361|1555361 1555568|1555568 CTTATGA 7mer-A1 dme-miR-970-3p 3L - 1555529 1555568 3'utr CG12099 FlyBase G25241.1 AGAGCTAGATGATGATCGCTTATGAAGTTACAAGATTTAT 6 1555548 0.950875887 4 6 39 1 1.079181246 0.166666667 0.5 0.75 6 0 0 12 3L:1555529-1555568 7 8 1538 FBgn0035232 2030.816667 84.03 129.1233333 0.003939302 0.095204094 0.061956269 6 -2 2 0.2 dme-miR-184-5p 6mer3-8 TGATAA 3L 15560771 15560776 - 3L_15560771_15560776_- 0.455044999 0.573039815 0.514042407 0.083434923 CG7739 FBtr0075596 15560724 15561085 3L - 15560749 15560803 3'utr CG7739 FlyBase G36968.1 TATATTTGTAATATGGTTTAAGAAATGTGATAATATAAAAAAGATAAAAAATAAT 34 15560787 0.709222123 7 32 252 0.951219512 1.591064607 0.170731707 0.117647059 0.268292683 34 2 0 39 3L:15560749-15560803 6 CG7739 FBtr0075596 15560724 15561085 TGATAA 6mer3-8 dme-miR-184-5p 3L - 15560757 15560809 3'utr CG7739 FlyBase G27913.1 ATAATTTATATTTGTAATATGGTTTAAGAAATGTGATAATATAAAAAAGATAA 31 15560787 0.983927689 8 28 220 0.93877551 1.662757832 0.224489796 0.451612903 0.653061224 31 3 0 46 3L:15560757-15560809 6 30.5 1539 FBgn0036509 636.82 33.70333333 51.37 0.047894224 0.904955 0.59373175 11 11 11 0.2 dme-miR-2a-2-5p 7mer-m8 TGATGAG 3L 15560836 15560842 + 3L_15560836_15560842_+ 0.635226744 0.647244966 0.641235855 0.008498221 AGO2 FBtr0075560|FBtr0331933|FBtr0075559 15560730|15560730|15560730 15561042|15561042|15561042 3L + 15560797 15560877 3'utr AGO2 FlyBase G30521.1 AAATATAAATTATGTAAAGGAGCATCTCTATTGATTCCATGATGAGCTATGATTTTAAAAGCCGCCTTGAGATGGTCCGCC 22 15560807 0.786331365 12 20 141 0.961538462 1.397940009 0.192307692 0.136363636 0.269230769 22 1 0 25 3L:15560797-15560877 7 AGO2 FBtr0075560|FBtr0331933|FBtr0075559 15560730|15560730|15560730 15561042|15561042|15561042 TGATGAG 7mer-m8 dme-miR-2a-2-5p 3L + 15560798 15560844 3'utr AGO2 FlyBase G23088.1 AATATAAATTATGTAAAGGAGCATCTCTATTGATTCCATGATGAGCT 13 15560807 0.877901483 6 10 92 0.764705882 1.113943352 0.176470588 0.307692308 0.470588235 13 4 0 13 3L:15560798-15560844 7 8.5 1540 FBgn0087035 9002.526667 265.6766667 406.73 0.000944179 0.031993777 0.020898385 29 29 29 0.2 dme-miR-14-3p 6mer3-8 AAGACT 3L 15603042 15603047 + 3L_15603042_15603047_+ 0.997930362 0.979651079 0.988790721 0.012925417 RhoGAP71E FBtr0075568|FBtr0075567 15602556|15602699 15603119|15603119 3L + 15603027 15603054 3'utr RhoGAP71E FlyBase G30598.1 AATCAACAACACATTAAGACTTAAGAAT 7 15603041 0.960273592 2 5 24 0.625 0.698970004 0.5 0.142857143 0.25 7 3 0 5 3L:15603027-15603054 6 RhoGAP71E FBtr0075568|FBtr0075567 15602556|15602699 15603119|15603119 AAGACT 6mer3-8 dme-miR-14-3p 3L + 15603022 15603061 3'utr RhoGAP71E FlyBase G23138.1 ACAACAATCAACAACACATTAAGACTTAAGAATTTGAAGA 9 15603041 0.707234511 3 8 32 1 1.041392685 0.090909091 0.25 0.454545455 8 0 0 11 3L:15603022-15603061 6 6.5 1541 FBgn0036518 3855.043333 129.2366667 200.3833333 0.001686103 0.050295324 0.032437827 1 1 1 0.2 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3L 15608457 15608462 + 3L_15608457_15608462_+ 0.87196788 0.909515162 0.890741521 0.02654995 RhoGAP71E FBtr0290065|FBtr0332093|FBtr0075569|FBtr0332092|FBtr0303510 15606679|15607124|15607124|15604842|15606675 15609125|15609125|15609125|15609125|15609125 3L + 15608414 15608474 3'utr RhoGAP71E FlyBase G30613.1 TCTTTGCGAAGTTAGAGAAAGAAACAATTTCCTCCTCGCTGTGTTTGACCGACCACATTTG 10 15608458 0.981315789 7 10 70 1 1.204119983 0.125 0.3 0.5625 10 0 0 16 3L:15608414-15608474 6 RhoGAP71E FBtr0332093|FBtr0290065|FBtr0303510|FBtr0332092|FBtr0075569 15607124|15606679|15606675|15604842|15607124 15609125|15609125|15609125|15609125|15609125 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3L + 15608439 15608466 3'utr RhoGAP71E FlyBase G23150.1 AATTTCCTCCTCGCTGTGTTTGACCGAC 5 15608458 0.799343531 3 5 45 1 1 0.3 0.8 0.9 5 0 0 10 3L:15608439-15608466 6 6.5 1542 FBgn0036518 3855.043333 129.2366667 200.3833333 0.001686103 0.050295324 0.032437827 -1 -1 -1 0.2 dme-miR-252-5p 6mer3-8 GTACTT 3L 15608796 15608801 - 3L_15608796_15608801_- 0.888574431 0.667412687 0.777993559 0.156384938 CG7650 FBtr0075591 15608705 15609453 3L - 15608739 15608905 3'utr CG7650 FlyBase G36986.1 TGGAACAGATCCTGCTCACTAAATATAGCGTATATCTATAACGATTCTGTCATCATTTACAACACGATTTATATTTATGTAATAGTATTTAGTGGCTAATGAATGTACTTCACTCGAACTCGTACTCCGTAAGATTTATACAATTATATATTTTATAGCTTATAGCC 66 15608802 0.9856153 18 61 498 0.942528736 1.913813852 0.137931034 0.212121212 0.402298851 66 5 0 82 3L:15608739-15608905 6 CG7650 FBtr0075591 15608705 15609453 GTACTT 6mer3-8 dme-miR-252-5p 3L - 15608772 15608848 3'utr CG7650 FlyBase G27926.1 TACAACACGATTTATATTTATGTAATAGTATTTAGTGGCTAATGAATGTACTTCACTCGAACTCGTACTCCGTAAGA 41 15608802 0.983139447 6 38 297 0.967741935 1.77815125 0.14516129 0.317073171 0.548387097 41 2 0 60 3L:15608772-15608848 6 43.5 1543 FBgn0036519 328.6966667 23.90333333 36.63666667 0.132340861 1.81982987 1.187335092 1 1 1 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 15609176 15609182 - 3L_15609176_15609182_- 0.661203126 0.661316511 0.661259819 8.02E-05 CG7650 FBtr0075591 15608705 15609453 3L - 15609136 15609261 3'utr CG7650 FlyBase G36989.1 ACACGACTTCTTGGAATCTCCGAGTTACTTGTCAGTTTAAGCCAGGGCTTTAGAATTATACGCAAATTTTGACCAAATATGTGTTCGTAAGATTAGCATTTAAGAGAACTTAAGCCCGCCCTCCGT 81 15609182 0.876618309 18 75 704 0.930693069 1.672097858 0.138613861 0.209876543 0.366336634 81 6 1 94 3L:15609136-15609261 7 CG7650 FBtr0075591 15608705 15609453 TGTGTTC 7mer-m8 dme-miR-317-3p 3L - 15609137 15609288 3'utr CG7650 FlyBase G27928.1 TATAATTTGTATCAACAAAAGAAACTAACACGACTTCTTGGAATCTCCGAGTTACTTGTCAGTTTAAGCCAGGGCTTTAGAATTATACGCAAATTTTGACCAAATATGTGTTCGTAAGATTAGCATTTAAGAGAACTTAAGCCCGCCCTCCG 59 15609182 0.987765252 21 53 469 0.926315789 1.944482672 0.105263158 0.474576271 0.673684211 59 7 0 88 3L:15609137-15609288 7 42 1544 FBgn0036519 328.6966667 23.90333333 36.63666667 0.127777383 1.757077116 1.146392503 0 0 0 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT 3L 15624067 15624073 + 3L_15624067_15624073_+ 0.643880607 0.643958843 0.643919725 5.53E-05 CG7372 FBtr0075570 15623010 15624130 3L + 15624025 15624104 3'utr CG7372 FlyBase G30630.1 TTTCCTACATACACTGAACGCATTTTTGTAAATTGAATTTGTGGCAGCTTCTCTCATTCTGTAGCATCTAAGAGAGTCCG 89 15624066 0.988220883 13 81 741 0.935185185 1.305351369 0.046296296 0.179775281 0.324074074 89 3 4 101 3L:15624025-15624104 7 CG7372 FBtr0075570 15623010 15624130 GGCAGCT 7mer-m8 dme-miR-980-3p 3L + 15624026 15624107 3'utr CG7372 FlyBase G23165.1 TTCCTACATACACTGAACGCATTTTTGTAAATTGAATTTGTGGCAGCTTCTCTCATTCTGTAGCATCTAAGAGAGTCCGATG 63 15624066 0.986406259 14 61 518 0.954545455 1.322219295 0.056818182 0.253968254 0.465909091 63 1 3 84 3L:15624026-15624107 7 70 1545 FBgn0036522 715.7133333 20.76333333 31.90666667 0.097804521 3.371327661 2.193898872 1 1 1 0.2 dme-miR-252-5p 7mer-m8 GTACTTA 3L 1574136 1574142 + 3L_1574136_1574142_+ 0.476771151 0.364699492 0.420735322 0.079246659 CG12004 FBtr0072746|FBtr0072745 1574027|1574027 1574732|1574732 3L + 1574075 1574148 3'utr CG12004 FlyBase G27159.1 AATTGCAATCACAATTCCACATTTCCGAGCGGGACGCGATCCGAAAGCGAAGCAAACAAGTGTACTTATAGCCC 38 1574135 0.955006835 6 37 155 0.980392157 1.698970004 0.176470588 0.263157895 0.450980392 38 1 0 50 3L:1574075-1574148 7 CG12004 FBtr0072745|FBtr0072746 1574027|1574027 1574732|1574732 GTACTTA 7mer-m8 dme-miR-252-5p 3L + 1574091 1574148 3'utr CG12004 FlyBase G20557.1 CCACATTTCCGAGCGGGACGCGATCCGAAAGCGAAGCAAACAAGTGTACTTATAGCCC 13 1574135 0.957730548 2 12 52 0.882352941 0.698970004 0.117647059 0.307692308 0.470588235 13 0 2 15 3L:1574091-1574148 7 20.5 1546 FBgn0035236 1184.423333 63.35333333 97.16 0.017308001 0.323582027 0.210992178 1 1 1 0.2 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 3L 1574233 1574238 + 3L_1574233_1574238_+ 0.651653007 0.669372806 0.660512906 0.012529791 CG12004 FBtr0072746|FBtr0072746|FBtr0072745|FBtr0072745 1574027|1574027|1574027|1574027 1574732|1574732|1574732|1574732 3L + 1574203 1574290 3'utr CG12004 FlyBase G27160.1 AGAGGAAGATACGTACTAGGCCTAGTTACTTACTTACTCACTCCACAAAACGCTGAAAGCTGAACAGAAATTAACTTAGCCAGTCCAT 21 1574237 0.989704286 8 16 154 0.84 1.021189299 0 0.142857143 0.28 21 3 1 21 3L:1574203-1574290 6 CG12004 FBtr0072745|FBtr0072745|FBtr0072746|FBtr0072746 1574027|1574027|1574027|1574027 1574732|1574732|1574732|1574732 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 3L + 1574209 1574249 3'utr CG12004 FlyBase G20558.1 AGATACGTACTAGGCCTAGTTACTTACTTACTCACTCCACA 16 1574236 0.707351064 5 15 125 0.931034483 1.431363764 0 0.5 0.724137931 16 2 0 27 3L:1574209-1574249 6 16.5 1547 FBgn0035236 1184.423333 63.35333333 97.16 0.01393083 0.26044407 0.169822972 -4 -3 -3.5 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 3L 1574324 1574329 + 3L_1574324_1574329_+ 0.997693759 0.999999956 0.998846858 0.00163073 CG12004 FBtr0072746|FBtr0072745 1574027|1574027 1574732|1574732 3L + 1574311 1574418 3'utr CG12004 FlyBase G27161.1 TTGCCTCTGCGTCTGTGTTTCTGTATTTCCTACGTTTACACTCTACACCTAAACTTAAGCGTTTTTTAAAACAACTTATTTAGACGTTAGCTATGTACGAAACGAACT 24 1574324 0.963673178 12 23 184 0.962962963 1.414973348 0.259259259 0.125 0.222222222 24 1 0 26 3L:1574311-1574418 6 CG12004 FBtr0072745|FBtr0072746 1574027|1574027 1574732|1574732 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 1574308 1574362 3'utr CG12004 FlyBase G20560.1 GAGTTGCCTCTGCGTCTGTGTTTCTGTATTTCCTACGTTTACACTCTACACCTAA 13 1574328 0.991571634 9 12 132 1 1.322219295 0.095238095 0.538461538 0.714285714 13 0 0 21 3L:1574308-1574362 6 9.5 1548 FBgn0035236 1184.423333 63.35333333 97.16 0.008020781 0.149952647 0.097776863 0 -4 -2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 1574627 1574633 + 3L_1574627_1574633_+ 0.775011595 0.762714615 0.768863105 0.008695292 CG12004 FBtr0072746|FBtr0072746|FBtr0072746|FBtr0072745|FBtr0072745|FBtr0072745 1574027|1574027|1574027|1574027|1574027|1574027 1574732|1574732|1574732|1574732|1574732|1574732 3L + 1574614 1574645 3'utr CG12004 FlyBase G27163.1 TTGACCACCCTTTTGTGATAAGCTCTCGTCGT 94 1574625 0.710938974 4 87 718 0.941176471 1.204119983 0.235294118 0.234042553 0.394957983 94 1 6 112 3L:1574614-1574645 7 CG12004 FBtr0072745|FBtr0072745|FBtr0072745|FBtr0072746|FBtr0072746|FBtr0072746 1574027|1574027|1574027|1574027|1574027|1574027 1574732|1574732|1574732|1574732|1574732|1574732 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 1574602 1574645 3'utr CG12004 FlyBase G20562.1 TGATTTCCCCTTTTGACCACCCTTTTGTGATAAGCTCTCGTCGT 51 1574625 0.738337802 7 49 382 0.972222222 1.544068044 0.25 0.333333333 0.527777778 51 1 1 70 3L:1574602-1574645 7 72 1549 FBgn0035236 1184.423333 63.35333333 97.16 0.060789076 1.136483216 0.741045698 2 2 2 0.2 dme-bantam-3p 7mer-m8 TGATCTC 3L 15810495 15810501 - 3L_15810495_15810501_- 0.615169267 0.56331808 0.589243674 0.036664335 fwe FBtr0075542|FBtr0075541|FBtr0075543 15810079|15810079|15810079 15810703|15812758|15812207 3L - 15810450 15810515 3'utr fwe FlyBase G36998.1 AATCCGATTAGCTCTGATCTCTTTCTAGAGCAATCCAAATTACTCGATCAGAAAGAAGCCACCCAA 94 15810494 0.986133988 7 88 742 0.941176471 1.447158031 0.075630252 0.212765957 0.378151261 94 4 3 112 3L:15810450-15810515 7 fwe FBtr0075541|FBtr0075543|FBtr0075542 15810079|15810079|15810079 15812758|15812207|15810703 TGATCTC 7mer-m8 dme-bantam-3p 3L - 15810480 15810518 3'utr fwe FlyBase G27938.1 TTAAATCCGATTAGCTCTGATCTCTTTCTAGAGCAATCC 47 15810494 0.707231811 4 47 361 1 1.826074803 0.029850746 0.361702128 0.552238806 47 0 0 67 3L:15810480-15810518 7 70 1550 FBgn0261722 816.3866667 52.16 79.50666667 0.085743684 1.34202454 0.880429314 -7 -7 -7 0.2 dme-miR-317-3p 8mer-A1 TGTGTTCA 3L 15819805 15819812 - 3L_15819805_15819812_- 0.630959743 0.631045961 0.631002852 6.10E-05 DCP2 FBtr0304975 15818732 15821444 3L - 15819766 15820013 3'utr DCP2 FlyBase G37008.1 TTCCTATAATTCGTAAGCATGTCACGTTAGCATGTTAACTAATTCCTCCTTCAAACGTAGTCTCCAATGTGTGAAACAGTTGCCTATTAGCGTTTATCTTTAGACTAAGCAATGACCAGCAATGTCTCCAAGGTGGTAACATCAGAGCCAATAGGTTTACATCACCGAAAATCAAAAGAAGTTCCCTGTAACTCGGCCTTTTGTGTTCAATTCGAAAGTAGTTCTCTAAGCGTATCGGCCGAAAACAG 66 15819813 0.980954254 24 63 582 0.960526316 1.86332286 0.105263158 0.136363636 0.25 66 3 0 73 3L:15819766-15820013 8 DCP2 FBtr0304975 15818732 15821444 TGTGTTCA 8mer-A1 dme-miR-317-3p 3L - 15819755 15819834 3'utr DCP2 FlyBase G27947.1 AGTTCCCTGTAACTCGGCCTTTTGTGTTCAATTCGAAAGTAGTTCTCTAAGCGTATCGGCCGAAAACAGTAAGAAATTTG 24 15819813 0.987805672 9 24 214 1 1.544068044 0.228571429 0.333333333 0.542857143 24 0 0 35 3L:15819755-15819834 8 22 1551 FBgn0036534 5151.046667 115.94 176.9933333 0.004270977 0.189753321 0.124298467 1 1 1 0.2 dme-miR-980-3p 6mer3-8 GGCAGC 3L 15820319 15820324 - 3L_15820319_15820324_- 0.98937497 0.992387846 0.990881408 0.002130371 DCP2 FBtr0304975 15818732 15821444 3L - 15820283 15820383 3'utr DCP2 FlyBase G37010.1 ACACCGTTCGAAATGAAGAGCCACTTTCCCACAATCAGGGGCAATATCAGGCATATCTCGGCAGCAAAGTGTTTCGTCAATTTTTGATTGACCACTTGGGA 20 15820327 0.942434576 8 16 71 0.791666667 0.801632346 0.083333333 0.2 0.333333333 20 3 2 19 3L:15820283-15820383 6 DCP2 FBtr0304975 15818732 15821444 GGCAGC 6mer3-8 dme-miR-980-3p 3L - 15820265 15820347 3'utr DCP2 FlyBase G27950.1 AGGGGCAATATCAGGCATATCTCGGCAGCAAAGTGTTTCGTCAATTTTTGATTGACCACTTGGGAATGGGATTGTGAAGCTAA 15 15820328 0.973641092 9 12 78 0.857142857 0.77815125 0.238095238 0.266666667 0.476190476 15 1 2 18 3L:15820265-15820347 6 12 1552 FBgn0036534 5151.046667 115.94 176.9933333 0.002329624 0.103501811 0.067799164 3 4 3.5 0.2 dme-bantam-3p 6mer3-8 TGATCT 3L 15820468 15820473 - 3L_15820468_15820473_- 0.961536225 0.956280148 0.958908186 0.003716624 DCP2 FBtr0304975 15818732 15821444 3L - 15820417 15820518 3'utr DCP2 FlyBase G37011.1 AATGTAAATAATTAAATTGTGATATAGTATTTCTTAGCACAATTGTGATCTTAGCAAACGGCTGGCAACTACAAAAACTTTTATAAGCGCAACCACAACACC 663 15820469 0.981746994 17 638 4683 0.958083832 1.823908741 0.032335329 0.214177979 0.376047904 663 24 11 800 3L:15820417-15820518 6 DCP2 FBtr0304975 15818732 15821444 TGATCT 6mer3-8 dme-bantam-3p 3L - 15820439 15820619 3'utr DCP2 FlyBase G27951.1 AAATAATATTTCCGGGCCGTATTACTTACTGCCCGCCCCCACCTATGAAAGTTAGACGAGAGAGGAGAGAAAGATGTGTAAGAAATATTACAAATAATAACAATGTAAATAATTAAATTGTGATATAGTATTTCTTAGCACAATTGTGATCTTAGCAAACGGCTGGCAACTACAAAAACTT 500 15820468 0.966631548 27 476 3364 0.951822917 1.96082739 0.029947917 0.406 0.61328125 500 30 7 731 3L:15820439-15820619 6 379.5 1553 FBgn0036534 5151.046667 115.94 176.9933333 0.073674347 3.273244782 2.144148556 -4 -5 -4.5 0.2 dme-miR-14-3p 6mer2-7 AGACTG 3L 15956218 15956223 + 3L_15956218_15956223_+ 0.834296264 0.945006968 0.889651616 0.078284287 GXIVsPLA2 FBtr0075509|FBtr0273189|FBtr0333572 15956052|15955390|15956052 15956252|15956252|15956465 3L + 15956181 15956253 3'utr GXIVsPLA2 FlyBase G30661.1 CATTATTGTATACCAAATAGTGGCATGCCAACGGTCCAGACTGTTAAATACATTGATATTTTTACCTATTATA 71 15956224 0.711175127 9 66 364 0.931034483 1.607455023 0.091954023 0.197183099 0.344827586 71 5 1 81 3L:15956181-15956253 6 GXIVsPLA2 FBtr0333572|FBtr0273189 15956052|15955390 15956465|15956252 AGACTG 6mer2-7 dme-miR-14-3p 3L + 15956187 15956265 3'utr GXIVsPLA2 FlyBase G23193.1 TGTATACCAAATAGTGGCATGCCAACGGTCCAGACTGTTAAATACATTGATATTTTTACCTATTATAAAGATGCTATAT 46 15956224 0.723541952 9 43 233 0.897058824 1.785329835 0.014705882 0.347826087 0.558823529 46 7 0 61 3L:15956187-15956265 6 52 1554 FBgn0036545 264.6666667 31.66 47.96 0.196473552 1.642451042 1.084236864 -6 -6 -6 0.2 dme-miR-305-5p 7mer-A1 GTACAAA 3L 15958136 15958142 + 3L_15958136_15958142_+ 0.544235215 0.603561847 0.573898531 0.041950241 elgi FBtr0075510|FBtr0333573 15957969|15957969 15958433|15958433 3L + 15958106 15958149 3'utr elgi FlyBase G30668.1 ATTCAAGCGCCTCATGACGACTTTCAAGTTGTACAAAAAATATA 8 15958134 0.967598524 2 8 44 1 1.113943352 0 0.375 0.615384615 8 0 0 13 3L:15958106-15958149 7 elgi FBtr0075510|FBtr0333573 15957969|15957969 15958433|15958433 GTACAAA 7mer-A1 dme-miR-305-5p 3L + 15958096 15958149 3'utr elgi FlyBase G23199.1 AAAACAAACCATTCAAGCGCCTCATGACGACTTTCAAGTTGTACAAAAAATATA 5 15958134 0.9768065 3 5 32 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3L:15958096-15958149 7 5.5 1555 FBgn0036546 86 6.756666667 10.27666667 0.063953488 0.814010853 0.535192994 2 2 2 0.2 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3L 15991754 15991761 + 3L_15991754_15991761_+ 0.549006704 0.53975827 0.544382487 0.006539606 Hip14 FBtr0333577 15990856 15992464 3L + 15991741 15991780 3'utr Hip14 FlyBase G30694.1 AATTATGCACTAGTCTAGTCAGAAAATTATTTAAGTAAAA 29 15991751 0.716583706 8 25 207 0.875 1.447158031 0.125 0.103448276 0.1875 29 4 0 28 3L:15991741-15991780 8 Hip14 FBtr0333577 15990856 15992464 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L + 15991738 15991804 3'utr Hip14 FlyBase G23218.1 TCTAATTATGCACTAGTCTAGTCAGAAAATTATTTAAGTAAAATGTTAAAGTGCAACTACAGCCACA 25 15991752 0.819522677 9 23 148 0.888888889 1.505149978 0.027777778 0.32 0.527777778 25 4 0 32 3L:15991738-15991804 8 25 1556 FBgn0259824 761.04 23.55 36.16 0.032849785 1.061571125 0.691371681 3 2 2.5 0.2 dme-miR-283-5p 6mer3-8 TGATAT 3L 15994508 15994513 - 3L_15994508_15994513_- 0.953194528 0.937333697 0.945264112 0.011215279 CG5830 FBtr0333579|FBtr0075521 15992667|15992667 15994730|15994730 3L - 15994469 15994525 3'utr CG5830 FlyBase G37117.1 ATAAGTTTTATATGATATACATAATTTTTACAGAACCCAATTTACACGGCACATTTG 13 15994510 0.857443896 3 12 118 0.933333333 0.84509804 0 0.153846154 0.266666667 13 0 1 14 3L:15994469-15994525 6 CG5830 FBtr0333579|FBtr0075521 15992667|15992667 15994730|15994730 TGATAT 6mer3-8 dme-miR-283-5p 3L - 15994473 15994523 3'utr CG5830 FlyBase G28017.1 AAGTTTTATATGATATACATAATTTTTACAGAACCCAATTTACACGGCACA 13 15994510 0.895769881 4 13 98 1 1.322219295 0.095238095 0.615384615 0.761904762 13 0 0 21 3L:15994473-15994523 6 8 1557 FBgn0036556 753.23 25.73 39.48333333 0.010620926 0.310921104 0.202617138 -3 -3 -3 0.2 dme-miR-14-3p 6mer2-7 AGACTG 3L 16032172 16032177 + 3L_16032172_16032177_+ 0.99978793 0.985069065 0.992428497 0.010407763 Notum FBtr0075435 16031340 16032752 3L + 16032126 16032196 3'utr Notum FlyBase G30709.1 TTGATAGTTTATGACCCGTTTAGGATTTTACTTGTGTGTGGAATCTAGACTGTTTCAAATGCCCCACGCAT 66 16032178 0.672011488 11 61 544 0.965116279 1.618048097 0.104651163 0.227272727 0.406976744 66 2 1 83 3L:16032126-16032196 6 Notum FBtr0075435 16031340 16032752 AGACTG 6mer2-7 dme-miR-14-3p 3L + 16032121 16032196 3'utr Notum FlyBase G23229.1 TTTATTTGATAGTTTATGACCCGTTTAGGATTTTACTTGTGTGTGGAATCTAGACTGTTTCAAATGCCCCACGCAT 53 16032178 0.930040603 12 49 453 0.925925926 1.875061263 0.135802469 0.41509434 0.617283951 53 6 0 75 3L:16032121-16032196 6 46.5 1558 FBgn0044028 1178.056667 37.54333333 57.65 0.039471785 1.238568765 0.8065915 -6 -6 -6 0.2 dme-miR-190-5p 8mer-A1 ACATATCA 3L 16032302 16032309 + 3L_16032302_16032309_+ 0.598433796 0.493015893 0.545724845 0.074541712 Notum FBtr0075435 16031340 16032752 3L + 16032243 16032336 3'utr Notum FlyBase G30710.1 TTATTTTGTACCTACCTCAGATCAGTAAGAATGAATGAAATTGATAAACAGCTGCCTTCACATATCATTGCGTACCTGTGCAACGAAAATCAAA 38 16032311 0.971031106 9 38 223 1 1.612783857 0.195121951 0.078947368 0.146341463 38 0 0 41 3L:16032243-16032336 8 Notum FBtr0075435 16031340 16032752 ACATATCA 8mer-A1 dme-miR-190-5p 3L + 16032241 16032368 3'utr Notum FlyBase G23230.1 ATTTATTTTGTACCTACCTCAGATCAGTAAGAATGAATGAAATTGATAAACAGCTGCCTTCACATATCATTGCGTACCTGTGCAACGAAAATCAAATACTTAATACTTAACTTAATACCGCCCGCATT 39 16032310 0.922475075 12 38 215 0.983606557 1.77815125 0.098360656 0.461538462 0.655737705 39 1 0 60 3L:16032241-16032368 8 20.5 1559 FBgn0044028 1178.056667 37.54333333 57.65 0.01740154 0.546035692 0.355594102 -9 -8 -8.5 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 16032591 16032598 + 3L_16032591_16032598_+ 0.498859168 0.498891376 0.498875272 2.28E-05 Notum FBtr0075435 16031340 16032752 3L + 16032548 16032666 3'utr Notum FlyBase G30712.1 AAGCCTGTACAGAACTGGTTGAAGTTTAGCCCTAAGAATTGTTGTACTTAAACTTAGTGATAATCATAAACGTAATGCAATTCGCAAGCTTATTAGCTTTTGTTAGCGTTCTTCAAATG 87 16032590 0.972755261 10 82 776 0.951923077 1.995635195 0.115384615 0.16091954 0.298076923 87 5 0 99 3L:16032548-16032666 8 Notum FBtr0075435 16031340 16032752 GTACTTAA 8mer-A1 dme-miR-252-5p 3L + 16032544 16032617 3'utr Notum FlyBase G23231.1 TGCTAAGCCTGTACAGAACTGGTTGAAGTTTAGCCCTAAGAATTGTTGTACTTAAACTTAGTGATAATCATAAA 58 16032590 0.75971643 8 57 519 0.97752809 1.939519253 0.078651685 0.396551724 0.606741573 58 2 0 87 3L:16032544-16032617 8 61 1560 FBgn0044028 1178.056667 37.54333333 57.65 0.051780192 1.624789133 1.05810928 1 1 1 0.2 dme-miR-1007-3p 6mer3-8 TGAGCT 3L 16079246 16079251 + 3L_16079246_16079251_+ 0.815825643 0.502500369 0.659163006 0.221554374 Mbs FBtr0333616|FBtr0308216|FBtr0075441 16078935|16063314|16078935 16079589|16079589|16079589 3L + 16079226 16079279 3'utr Mbs FlyBase G30734.1 AGCTAAAATTAAGTTCACATTGAGCTCATTGGCTTTGGACTGGTCACTGGTAAT 26 16079245 0.927387724 5 26 199 1 1.491361694 0.419354839 0.192307692 0.322580645 26 0 0 31 3L:16079226-16079279 6 Mbs FBtr0308216|FBtr0075441|FBtr0333616 16063314|16078935|16078935 16079589|16079589|16079589 TGAGCT 6mer3-8 dme-miR-1007-3p 3L + 16079231 16079268 3'utr Mbs FlyBase G23250.1 AAATTAAGTTCACATTGAGCTCATTGGCTTTGGACTGG 15 16079245 0.813225365 2 15 104 1 1.230448921 0.705882353 0.133333333 0.235294118 15 0 0 17 3L:16079231-16079268 6 20.5 1561 FBgn0005536 2947.596667 72.49666667 111.4433333 0.006954819 0.282771622 0.18394999 1 1 1 0.2 dme-miR-1003-3p 7mer-A1 TGTGAGA 3L 16081969 16081975 + 3L_16081969_16081975_+ 0.816120356 0.821817695 0.818969025 0.004028599 Mbs FBtr0112852|FBtr0112851|FBtr0301575|FBtr0301473|FBtr0308213|FBtr0308214|FBtr0301472|FBtr0308215|FBtr0112850 16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844 16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026 3L + 16081862 16081986 3'utr Mbs FlyBase G30741.2 CTGTTATTTATTAAATTCGCCTAAGAGATTTTGTGTTACTCGTAAATGGAAACGATAATCAAGCATAAACAACCATAAGAACGTGAATTGTGTAATATGTAAAATTGTGTGAGAAAATATTTATG 128 16081967 0.741365912 19 120 976 0.97260274 1.851258349 0.164383562 0.134920635 0.253424658 126 3 1 142 3L:16081862-16081986 7 Mbs FBtr0301472|FBtr0308215|FBtr0112850|FBtr0308214|FBtr0301473|FBtr0308213|FBtr0112852|FBtr0112851|FBtr0301575 16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844 16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026 TGTGAGA 7mer-A1 dme-miR-1003-3p 3L + 16081929 16082033 3'utr Mbs FlyBase G23257.1 AACAACCATAAGAACGTGAATTGTGTAATATGTAAAATTGTGTGAGAAAATATTTATGAAAATTTGATTCAAATACGAAACTTAATAAATGTGATCGCAAGCAAA 94 16081967 0.803345873 11 91 629 0.970149254 2.113943352 0.052238806 0.35106383 0.544776119 94 4 0 130 3L:16081929-16082033 7 58 1562 FBgn0005536 2947.596667 72.49666667 111.4433333 0.019677048 0.800036783 0.520443873 2 2 2 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 16088030 16088035 - 3L_16088030_16088035_- 0.977661604 0.985436463 0.981549034 0.005497685 CG5235 FBtr0333599|FBtr0075497 16087815|16087625 16088100|16088100 3L - 16087993 16088083 3'utr CG5235 FlyBase G37169.1 AAGTATTATTTAAGCCATCCAAAACGTTTTCAGTGAAAATGCTAGCTTACCAAATGAACGATTATCAAATATTCAAAATTATTCTCGTAAT 50 16088036 0.959429883 6 49 242 0.969230769 1.799340549 0.123076923 0.24 0.415384615 50 2 0 63 3L:16087993-16088083 6 CG5235 FBtr0333599|FBtr0075497 16087815|16087625 16088100|16088100 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 16087994 16088058 3'utr CG5235 FlyBase G28067.1 GTTTTCAGTGAAAATGCTAGCTTACCAAATGAACGATTATCAAATATTCAAAATTATTCTCGTAA 36 16088036 0.964036869 8 34 177 0.944444444 1.707570176 0.166666667 0.472222222 0.648148148 36 3 0 51 3L:16087994-16088058 6 39 1563 FBgn0036565 1024 48.82333333 74.77 0.038085938 0.798798389 0.521599572 1 1 1 0.2 dme-bantam-3p 6mer3-8 TGATCT 3L 16095599 16095604 + 3L_16095599_16095604_+ 0.999424941 0.959195858 0.979310399 0.028446199 ClC-c FBtr0333598|FBtr0302503|FBtr0075444 16095195|16095195|16095195 16096151|16095854|16095854 3L + 16095564 16095621 3'utr ClC-c FlyBase G30759.1 TATATGTTCACATACAGCTTGATAACACTATGAAATGATCTATAGTTGTAAAAGGAAC 15 16095600 0.742966812 6 15 111 1 1.230448921 0.411764706 0.133333333 0.235294118 15 0 0 17 3L:16095564-16095621 6 ClC-c FBtr0075444|FBtr0302503|FBtr0333598 16095195|16095195|16095195 16095854|16095854|16096151 TGATCT 6mer3-8 dme-bantam-3p 3L + 16095577 16095618 3'utr ClC-c FlyBase G23268.1 ACAGCTTGATAACACTATGAAATGATCTATAGTTGTAAAAGG 12 16095599 0.985004114 3 10 81 0.894736842 1.230448921 0.421052632 0.5 0.684210526 12 2 0 17 3L:16095577-16095618 6 12.5 1564 FBgn0036566 804.2333333 24.65333333 37.96666667 0.015542753 0.507030827 0.329236172 -1 0 -0.5 0.2 dme-miR-13b-2-5p 6mer2-7 TTGACG 3L 16120513 16120518 + 3L_16120513_16120518_+ 0.973460205 0.988276373 0.980868289 0.010476635 Taf4 FBtr0075449|FBtr0301911|FBtr0075450|FBtr0075448|FBtr0333291|FBtr0333290|FBtr0114589|FBtr0345951|FBtr0075451 16120071|16120071|16120071|16120071|16120071|16120071|16120071|16120071|16120071 16121368|16121368|16121368|16121651|16121368|16121368|16121368|16121368|16121368 3L + 16120493 16120545 3'utr Taf4 FlyBase G30785.1 TAATGTTTGCATCAACTGCATTGACGGCCTTATCTAAACGATATAAACATAAT 17 16120523 0.717692008 6 16 112 0.909090909 1.301029996 0.045454545 0.294117647 0.454545455 17 2 0 20 3L:16120493-16120545 6 Taf4 FBtr0333291|FBtr0114589|FBtr0333290|FBtr0345951|FBtr0075451|FBtr0075449|FBtr0301911|FBtr0075450|FBtr0075448 16120071|16120071|16120071|16120071|16120071|16120071|16120071|16120071|16120071 16121368|16121368|16121368|16121368|16121368|16121368|16121368|16121368|16121651 TTGACG 6mer2-7 dme-miR-13b-2-5p 3L + 16120501 16120535 3'utr Taf4 FlyBase G23289.1 GCATCAACTGCATTGACGGCCTTATCTAAACGATA 5 16120522 0.690117559 3 4 27 0.7 0.84509804 0 0.4 0.7 5 3 0 7 3L:16120501-16120535 6 10 1565 FBgn0010280 2452.246667 62.76333333 96.23333333 0.004077893 0.159328695 0.103914098 -10 -9 -9.5 0.2 dme-miR-999-3p 6mer3-8 AGTTAA 3L 16121480 16121485 + 3L_16121480_16121485_+ 0.998233159 0.994977341 0.99660525 0.002302269 Taf4 FBtr0075448 16120071 16121651 3L + 16121448 16121495 3'utr Taf4 FlyBase G30794.2 TTTATGTCGTATGGAATATGTAACGGTATCTCAGTTAATTAGCTAGTT 12 16121482 0.987204677 5 8 99 0.722222222 1.113943352 0.055555556 0.333333333 0.555555556 12 5 0 13 3L:16121448-16121495 6 Taf4 FBtr0075448 16120071 16121651 AGTTAA 6mer3-8 dme-miR-999-3p 3L + 16121451 16121500 3'utr Taf4 FlyBase G23296.1 ATGTCGTATGGAATATGTAACGGTATCTCAGTTAATTAGCTAGTTAAATC 11 16121482 0.989439887 4 8 91 0.705882353 1.079181246 0 0.363636364 0.588235294 11 5 0 12 3L:16121451-16121500 6 9.5 1566 FBgn0010280 2452.246667 62.76333333 96.23333333 0.003873999 0.15136226 0.098718393 -2 -2 -2 0.2 dme-miR-304-5p 6mer3-8 TGAGAT 3L 16136604 16136609 + 3L_16136604_16136609_+ 0.851411065 0.997219282 0.924315173 0.103101967 elg1 FBtr0089714|FBtr0307518|FBtr0089713 16136465|16136465|16136465 16136691|16136691|16136691 3L + 16136539 16136668 3'utr elg1 FlyBase G30829.1 CAGATCGTTTAAGAAGAGTTGATCTTTTTTAAGATAGCTTTGTGGACATGAAGATGTAGCTATTATGAGATAAACCTAGAACTATTTACAATTTAACTATGATAAACTAACTACGACCTCATCCTATGTT 16 16136604 0.980340902 11 15 115 0.952380952 1 0.047619048 0.1875 0.380952381 16 0 1 20 3L:16136539-16136668 6 elg1 FBtr0089714|FBtr0307518|FBtr0089713 16136465|16136465|16136465 16136691|16136691|16136691 TGAGAT 6mer3-8 dme-miR-304-5p 3L + 16136579 16136610 3'utr elg1 FlyBase G23322.1 TGTGGACATGAAGATGTAGCTATTATGAGATA 6 16136601 0.989423315 3 4 37 0.75 0.77815125 0 0.166666667 0.375 6 2 0 6 3L:16136579-16136610 6 4 1567 FBgn0036574 878.6533333 25.39 38.88333333 0.004552421 0.15754234 0.102871839 0 3 1.5 0.2 dme-miR-932-5p 6mer3-8 GGAATT 3L 16139512 16139517 - 3L_16139512_16139517_- 0.994249248 0.999925368 0.997087308 0.00401368 CG5151 FBtr0307521|FBtr0346525|FBtr0307519|FBtr0307520 16137800|16139499|16139499|16139499 16140460|16140460|16140460|16140460 3L - 16139506 16139553 3'utr CG5151 FlyBase G37208.1 AGTTCAATTGAAATTTGTATTTGTATATTTGCTAACGGAATTACGATG 8 16139541 0.992229324 7 7 78 0.888888889 0.903089987 0.222222222 0.125 0.222222222 8 1 0 8 3L:16139506-16139553 6 CG5151 FBtr0307519|FBtr0307520|FBtr0307521|FBtr0346525 16139499|16139499|16137800|16139499 16140460|16140460|16140460|16140460 GGAATT 6mer3-8 dme-miR-932-5p 3L - 16139509 16139562 3'utr CG5151 FlyBase G28094.1 ACAATTTTTAGTTCAATTGAAATTTGTATTTGTATATTTGCTAACGGAATTACG 7 16139539 0.992576415 6 7 78 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3L:16139509-16139562 6 2 1568 FBgn0036576 611.6966667 13.02666667 19.93 0.003269594 0.153531218 0.100351229 24 22 23 0.2 dme-bantam-3p 8mer-A1 TGATCTCA 3L 16230842 16230849 + 3L_16230842_16230849_+ 0.627985659 0.629255384 0.628620521 0.000897813 CG5027 FBtr0075457 16230770 16231139 3L + 16230792 16230866 3'utr CG5027 FlyBase G30835.1 TCTAGTGAAAGCTTTTGATTGCGAGTGAATGTTAGAGAAAGTAAATAAGATGATCTCATAGTGCATTTCCGAGCA 67 16230842 0.975587111 7 66 419 0.9875 1.897627091 0.5125 0.149253731 0.2875 67 1 0 79 3L:16230792-16230866 8 CG5027 FBtr0075457 16230770 16231139 TGATCTCA 8mer-A1 dme-bantam-3p 3L + 16230820 16230862 3'utr CG5027 FlyBase G23326.1 ATGTTAGAGAAAGTAAATAAGATGATCTCATAGTGCATTTCCG 58 16230842 0.796350367 5 53 362 0.905882353 1.886490725 0.564705882 0.362068966 0.564705882 58 8 0 77 3L:16230820-16230862 8 61 1569 FBgn0036579 214.6666667 14.06 21.50666667 0.284161491 4.338549075 2.83632982 0 0 0 0.2 dme-miR-31a-5p 8mer-A1 TCTTGCCA 3L 16236638 16236645 + 3L_16236638_16236645_+ 0.629652458 0.631134801 0.63039363 0.001048144 l(3)72Dp FBtr0075459 16236240 16236999 3L + 16236625 16236662 3'utr l(3)72Dp FlyBase G30844.1 AAGCGTTAAATATTCTTGCCAAATCAAGAGACTAATAT 8 16236637 0.703653725 3 8 57 1 0.954242509 0 0.125 0.222222222 8 0 0 9 3L:16236625-16236662 8 l(3)72Dp FBtr0075459 16236240 16236999 TCTTGCCA 8mer-A1 dme-miR-31a-5p 3L + 16236606 16236661 3'utr l(3)72Dp FlyBase G23333.1 AAAACAAAATTCTATCTTTAAGCGTTAAATATTCTTGCCAAATCAAGAGACTAATA 11 16236639 0.98601774 4 9 70 0.866666667 0.812913357 0.066666667 0.272727273 0.466666667 11 1 1 13 3L:16236606-16236661 8 9 1570 FBgn0263607 58 2.816666667 4.343333333 0.155172414 3.195266272 2.072141213 1 -1 0 0.2 dme-miR-1008-3p 6mer2-7 GCTGTG 3L 16372779 16372784 - 3L_16372779_16372784_- 0.992784694 0.996309336 0.994547015 0.002492269 roq FBtr0075423|FBtr0333265 16372435|16370936 16374520|16374520 3L - 16372766 16372808 3'utr roq FlyBase G37250.1 TTGGCGATATCCGCTCAGACTTTGGCTGTGGTGATGATGATTT 46 16372786 0.740223918 8 46 398 1 1.681241237 0.291666667 0.043478261 0.083333333 46 0 0 48 3L:16372766-16372808 6 roq FBtr0075423|FBtr0333265 16372435|16370936 16374520|16374520 GCTGTG 6mer2-7 dme-miR-1008-3p 3L - 16372772 16372807 3'utr roq FlyBase G28130.1 TGGCGATATCCGCTCAGACTTTGGCTGTGGTGATGA 30 16372786 0.718721147 5 30 244 1 1.698970004 0.18 0.366666667 0.62 30 0 0 50 3L:16372772-16372807 6 37.5 1571 FBgn0036621 1477.286667 40.04333333 61.43666667 0.025384376 0.936485474 0.610384678 2 2 2 0.2 dme-miR-1003-3p 7mer-A1 TGTGAGA 3L 16373475 16373481 - 3L_16373475_16373481_- 0.598350554 0.558755106 0.57855283 0.027998247 roq FBtr0075423|FBtr0333265|FBtr0331173 16372435|16370936|16373214 16374520|16374520|16374520 3L - 16373444 16373522 3'utr roq FlyBase G37252.1 AATAAATTAAAATCACGTCCCATTTTCCCCTTTTTGTAAACTGTGAGAAGAGTGAAGTACAGGAGAATTGACAAACAGG 10 16373488 0.982669797 7 9 63 0.9 0.954242509 0.2 0 0 10 1 0 9 3L:16373444-16373522 7 roq FBtr0331173|FBtr0075423|FBtr0333265 16373214|16372435|16370936 16374520|16374520|16374520 TGTGAGA 7mer-A1 dme-miR-1003-3p 3L - 16373466 16373519 3'utr roq FlyBase G28133.1 AAATTAAAATCACGTCCCATTTTCCCCTTTTTGTAAACTGTGAGAAGAGTGAAG 5 16373510 0.984506562 4 5 41 1 0.903089987 0 0.4 0.625 5 0 0 8 3L:16373466-16373519 7 3 1572 FBgn0036621 1477.286667 40.04333333 61.43666667 0.00203075 0.074918838 0.048830774 7 29 18 0.2 dme-miR-304-5p 6mer3-8 TGAGAT 3L 16373956 16373961 - 3L_16373956_16373961_- 0.925144251 0.931795405 0.928469828 0.004703038 roq FBtr0075423|FBtr0333265|FBtr0331173 16372435|16370936|16373214 16374520|16374520|16374520 3L - 16373922 16373986 3'utr roq FlyBase G37254.1 CAGCGAAGATTTTAAAGCAATTTTCTGAGATGAAATAGAGATACTGTGCACTAATTAACTGAATC 30 16373965 0.986502343 6 30 252 1 1.531478917 0 0.1 0.205882353 30 0 0 34 3L:16373922-16373986 6 roq FBtr0331173|FBtr0075423|FBtr0333265 16373214|16372435|16370936 16374520|16374520|16374520 TGAGAT 6mer3-8 dme-miR-304-5p 3L - 16373937 16373990 3'utr roq FlyBase G28135.2 ATAGCAGCGAAGATTTTAAAGCAATTTTCTGAGATGAAATAGAGATACTGTGCA 18 16373964 0.974481787 4 16 125 0.826086957 1.278753601 0.130434783 0.166666667 0.347826087 18 4 0 19 3L:16373937-16373990 6 22.5 1573 FBgn0036621 1477.286667 40.04333333 61.43666667 0.015230626 0.561891284 0.366230807 4 3 3.5 0.2 dme-miR-277-3p 7mer-m8 TGCATTT 3L 1638011 1638017 - 3L_1638011_1638017_- 0.620202426 0.620184916 0.620193671 1.24E-05 metl FBtr0072814|FBtr0072813 1637940|1637940 1638040|1638040 3L - 1637994 1638037 3'utr metl FlyBase G33402.1 AATTTAGACGAATAGTTCTGTGCATTTTAAACCTTGTTCAAATC 5 1638018 0.985561738 5 5 43 1 0.954242509 0 0.6 0.777777778 5 0 0 9 3L:1637994-1638037 7 metl FBtr0072814|FBtr0072813 1637940|1637940 1638040|1638040 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 1637993 1638037 3'utr metl FlyBase G25265.1 AATTTAGACGAATAGTTCTGTGCATTTTAAACCTTGTTCAAATCA 6 1638012 0.992272545 5 5 52 0.7 0.84509804 0 0.5 0.7 6 3 0 7 3L:1637993-1638037 7 5.5 1574 FBgn0035247 536.0166667 56.80666667 87.84333333 0.010260875 0.096819622 0.062611467 1 -5 -2 0.2 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 16470650 16470657 - 3L_16470650_16470657_- 0.666268479 0.666115466 0.666191973 0.000108187 aos FBtr0075408 16470384 16471298 3L - 16470594 16470686 3'utr aos FlyBase G37291.1 CGAAGGCAGTTTGAAACTGTGGCAACTCTGGCAGCTATTTTAGTGCAATTTTTGTGACGCCTTCACAGCCACTTCTCCGGAATTTGAGCAAGT 1274 16470658 0.868090257 17 1256 9187 0.984866828 2.910357557 0.401331719 0.226059655 0.4031477 1274 24 1 1627 3L:16470594-16470686 8 aos FBtr0075408 16470384 16471298 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L - 16470587 16470688 3'utr aos FlyBase G28164.1 AGCGAAGGCAGTTTGAAACTGTGGCAACTCTGGCAGCTATTTTAGTGCAATTTTTGTGACGCCTTCACAGCCACTTCTCCGGAATTTGAGCAAGTAAATTAG 1016 16470658 0.981606195 18 1003 7362 0.987228608 2.411058239 0.344827586 0.382874016 0.599616858 1016 15 5 1546 3L:16470587-16470688 8 1133 1575 FBgn0004569 11.33333333 0.5 0.773333333 99.97058824 2266 1465.086207 1 1 1 0.2 dme-miR-14-3p 6mer3-8 AAGACT 3L 16491942 16491947 - 3L_16491942_16491947_- 0.998232664 0.900540278 0.949386471 0.069078959 CG43373 FBtr0307367 16491836 16507727 3L - 16491873 16491961 3'utr CG43373 FlyBase G37301.1 CGATTCCTAATAAAAAGACTTGAACCCAGAGCAGATATTGAATGCATTGCATTGAATATTTTGCCAATGTAAATCATTCCCATCAACAC 12 16491953 0.959026325 8 12 63 1 1.230448921 0.294117647 0.25 0.470588235 12 0 0 17 3L:16491873-16491961 6 CG43373 FBtr0307367 16491836 16507727 AAGACT 6mer3-8 dme-miR-14-3p 3L - 16491929 16491997 3'utr CG43373 FlyBase G28170.1 GAGGAGCACAAGAACTAGCCTGTGCAATAACTTTAACGATTCCTAATAAAAAGACTTGAACCCAGAGCA 9 16491952 0.97609129 5 6 35 0.777777778 0.84509804 0.444444444 0 0 9 2 0 7 3L:16491929-16491997 6 6.5 1576 FBgn0263131 3.073333333 0.063333333 0.1 2.114967462 102.6315789 65 6 5 5.5 0.2 dme-miR-282-5p 6mer2-7 GAGGCT 3L 16575964 16575969 + 3L_16575964_16575969_+ 0.913869084 0.997591723 0.955730404 0.059200818 mbf1 FBtr0075393|FBtr0305570|FBtr0305569|FBtr0075394 16575868|16575868|16575868|16575868 16576408|16576871|16576408|16576871 3L + 16575941 16575994 3'utr mbf1 FlyBase G30873.1 GAACCATCAACACACGGATTCTGGAGGCTGGAGCACTGTAAGCGGCAGACGCAA 8 16575961 0.93051506 3 7 28 1 1 0.7 0.125 0.3 8 0 0 10 3L:16575941-16575994 6 mbf1 FBtr0305570|FBtr0305569|FBtr0075394|FBtr0075393 16575868|16575868|16575868|16575868 16576871|16576408|16576871|16576408 GAGGCT 6mer2-7 dme-miR-282-5p 3L + 16575953 16575991 3'utr mbf1 FlyBase G23350.1 CACGGATTCTGGAGGCTGGAGCACTGTAAGCGGCAGACG 5 16575962 0.961839735 2 4 20 0.75 0.77815125 0.75 0.6 0.75 5 2 0 6 3L:16575953-16575991 6 5.5 1577 FBgn0262732 2231.09 243.8166667 374.3166667 0.002465163 0.022557933 0.014693441 3 2 2.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3L 16576661 16576667 + 3L_16576661_16576667_+ 0.660916216 0.660530056 0.660723136 0.000273014 mbf1 FBtr0305570|FBtr0075394 16575868|16575868 16576871|16576871 3L + 16576574 16576687 3'utr mbf1 FlyBase G30878.1 TATCGTGTAAGGCTCTTGAACTGTGCGTTTACTAATGCATTATACATATTATACAAAAACATATGCTAAATGTATTTAGAAACATTTTCTAGTCTACAAAATATTTAAATAATT 91 16576660 0.94012809 11 87 657 0.974137931 1.752048448 0.00862069 0.241758242 0.405172414 91 2 1 113 3L:16576574-16576687 7 mbf1 FBtr0305570|FBtr0075394 16575868|16575868 16576871|16576871 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 16576635 16576682 3'utr mbf1 FlyBase G23354.1 TATGCTAAATGTATTTAGAAACATTTTCTAGTCTACAAAATATTTAAA 61 16576660 0.923070235 6 61 428 1 1.886490725 0.012987013 0.196721311 0.363636364 61 0 0 77 3L:16576635-16576682 7 69 1578 FBgn0262732 2231.09 243.8166667 374.3166667 0.030926587 0.282999521 0.184335901 1 1 1 0.2 dme-bantam-3p 6mer3-8 TGATCT 3L 16589804 16589809 + 3L_16589804_16589809_+ 0.997770144 0.997768351 0.997769247 1.20E-06 l(3)73Ah FBtr0075311|FBtr0307336 16589773|16589773 16590132|16590132 3L + 16589728 16589892 stop_codon l(3)73Ah FlyBase G30898.1 GGGATCCGCCGCTTCGGCTGCAGTTTCGTCCGCGGGTCGAGCTCTAACCACTGTTTTAGTATAATGCCACAACAAATGATCTATTTTTATAATTTATTGACAATGCGTAAATATCGTAATTAGGAGAGTCGCTAGTGTTAGTCCCCTCGAAACCATGAGTGTATG 151 16589804 0.98487165 21 149 1203 0.983695652 1.655618584 0.048913043 0.165562914 0.315217391 151 0 3 181 3L:16589728-16589892 6 l(3)73Ah FBtr0307336|FBtr0075311 16589773|16589773 16590132|16590132 TGATCT 6mer3-8 dme-bantam-3p 3L + 16589729 16589847 stop_codon l(3)73Ah FlyBase G23376.1 GGATCCGCCGCTTCGGCTGCAGTTTCGTCCGCGGGTCGAGCTCTAACCACTGTTTTAGTATAATGCCACAACAAATGATCTATTTTTATAATTTATTGACAATGCGTAAATATCGTAAT 98 16589804 0.91403582 13 93 817 0.922535211 2.117271296 0.014084507 0.346938776 0.549295775 98 11 0 131 3L:16589729-16589847 6 106.5 1579 FBgn0002283 168.7966667 15.21333333 23.25333333 0.63093663 7.000438212 4.579988532 0 0 0 0.2 dme-miR-184-5p 6mer3-8 TGATAA 3L 16613454 16613459 - 3L_16613454_16613459_- 0.829041358 0.999965025 0.914503191 0.120861237 Mo25 FBtr0075358 16613216 16614149 3L - 16613404 16613498 3'utr Mo25 FlyBase G37362.1 GAAAACTAAATACTGCATAAAAATAATAATAATTCATAGTGATAATTGTCTGTGCATCCTTCGGCATGGACTCTACTATATATACACTGATATAT 16 16613453 0.993852154 10 12 137 0.75 0.77815125 0.125 0 0 16 3 1 12 3L:16613404-16613498 6 Mo25 FBtr0075358 16613216 16614149 TGATAA 6mer3-8 dme-miR-184-5p 3L - 16613440 16613471 3'utr Mo25 FlyBase G28215.1 AATAATTCATAGTGATAATTGTCTGTGCATCC 6 16613466 0.885110658 5 6 47 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3L:16613440-16613471 6 7 1580 FBgn0017572 1422.476667 76.83666667 118.16 0.004920995 0.091102338 0.059241706 -6 7 0.5 0.2 dme-bantam-3p 6mer3-8 TGATCT 3L 16616544 16616549 - 3L_16616544_16616549_- 0.897478432 0.960330608 0.92890452 0.044443217 Abl FBtr0345369|FBtr0112790 16615864|16615864 16622773|16622773 3L - 16616516 16616563 3'utr Abl FlyBase G37369.2 TATGTCTATGATCATGATCTATATGTGCTCGGCGTAACCATTGCATAC 14 16616549 0.788815173 5 13 111 0.944444444 1.230448921 0.166666667 0.214285714 0.388888889 14 1 0 17 3L:16616516-16616563 6 Abl FBtr0345369|FBtr0112790 16615864|16615864 16622773|16622773 TGATCT 6mer3-8 dme-bantam-3p 3L - 16616514 16616565 3'utr Abl FlyBase G28219.1 TATATGTCTATGATCATGATCTATATGTGCTCGGCGTAACCATTGCATACAC 11 16616549 0.985251883 4 11 90 1 1.204119983 0 0.363636364 0.5625 11 0 0 16 3L:16616514-16616565 6 11 1581 FBgn0000017 169917.41 1653.646667 2554.62 6.47E-05 0.006651965 0.004305924 0 0 0 0.2 dme-miR-252-5p 6mer3-8 GTACTT 3L 16649304 16649309 - 3L_16649304_16649309_- 0.999876874 0.997680431 0.998778652 0.00155316 Baldspot FBtr0075355|FBtr0075356 16648440|16648839 16650074|16650074 3L - 16649294 16649329 3'utr Baldspot FlyBase G37413.1 AGTTGGGGTCTGAGAACTTTGTACTTCTAAGTCTAT 10 16649309 0.670045333 4 10 86 1 1.079181246 0.166666667 0.2 0.333333333 10 0 0 12 3L:16649294-16649329 6 Baldspot FBtr0075356|FBtr0075355 16648839|16648440 16650074|16650074 GTACTT 6mer3-8 dme-miR-252-5p 3L - 16649292 16649329 3'utr Baldspot FlyBase G28254.1 AGTTGGGGTCTGAGAACTTTGTACTTCTAAGTCTATAC 6 16649309 0.984309826 5 6 46 1 0.954242509 0.333333333 0.5 0.666666667 6 0 0 9 3L:16649292-16649329 6 7 1582 FBgn0260960 2360.606667 103.09 158.2033333 0.002965339 0.067901833 0.044246855 0 0 0 0.2 dme-bantam-3p 6mer3-8 TGATCT 3L 16662769 16662774 - 3L_16662769_16662774_- 0.781550088 0.904889257 0.843219673 0.087213985 Galphaf FBtr0075354 16662555 16662848 3L - 16662758 16662796 3'utr Galphaf FlyBase G37424.1 GTCCTCAGGCCCCCACCAACTGTGATCTAGTAGGATATG 17 16662769 0.938051367 3 17 68 1 1.342422681 0.318181818 0.294117647 0.454545455 17 0 0 22 3L:16662758-16662796 6 Galphaf FBtr0075354 16662555 16662848 TGATCT 6mer3-8 dme-bantam-3p 3L - 16662763 16662790 3'utr Galphaf FlyBase G28261.1 AGGCCCCCACCAACTGTGATCTAGTAGG 6 16662769 0.92378564 3 6 21 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 3L:16662763-16662790 6 11.5 1583 FBgn0010223 69.33333333 4.69 7.25 0.165865385 2.452025586 1.586206897 -5 -5 -5 0.2 dme-miR-252-5p 6mer3-8 GTACTT 3L 16672363 16672368 - 3L_16672363_16672368_- 0.999999869 0.888345884 0.944172877 0.078951301 zetaCOP FBtr0075353 16671937 16672420 3L - 16672353 16672454 lincRNA_exon-lincRNA_intron zetaCOP FlyBase G37429.1 GGTAACTAACACCCTTAATGGTCTATTTTGGTAGTCTAACTACTTGGTAGCTCTTCTAAGTGTTTATAACTCAATGGTAGCCGTTTGTACTTTAATTTTGTC 28 16672380 0.988376901 11 26 263 0.935483871 1.462397998 0.096774194 0.107142857 0.193548387 28 2 0 29 3L:16672353-16672454 6 zetaCOP FBtr0075353 16671937 16672420 GTACTT 6mer3-8 dme-miR-252-5p 3L - 16672342 16672397 3'utr zetaCOP FlyBase G28266.1 AAGTGTTTATAACTCAATGGTAGCCGTTTGTACTTTAATTTTGTCTGGTTTCGTTT 10 16672380 0.986322987 4 10 92 1 1.041392685 0 0.1 0.181818182 10 0 0 11 3L:16672342-16672397 6 13 1584 FBgn0040512 644 115.9 176.2033333 0.020186335 0.11216566 0.0737784 12 12 12 0.2 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3L 16723835 16723842 + 3L_16723835_16723842_+ 0.631032733 0.631133053 0.631082893 7.10E-05 Dab FBtr0305085|FBtr0305084|FBtr0333625|FBtr0330190|FBtr0305086|FBtr0333626|FBtr0330189|FBtr0075318 16723340|16723340|16723340|16723748|16723340|16723340|16723748|16723340 16724415|16724415|16724415|16724415|16724415|16724415|16724415|16724575 3L + 16723821 16723847 3'utr Dab FlyBase G30935.1 ATTCGCCACATATATCTAGTCAACTCA 13 16723833 0.711802589 3 13 81 1 1.255272505 0 0.307692308 0.5 13 0 0 18 3L:16723821-16723847 8 Dab FBtr0330189|FBtr0075318|FBtr0305086|FBtr0333626|FBtr0333625|FBtr0330190|FBtr0305085|FBtr0305084 16723748|16723340|16723340|16723340|16723340|16723748|16723340|16723340 16724415|16724575|16724415|16724415|16724415|16724415|16724415|16724415 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L + 16723811 16723850 3'utr Dab FlyBase G23405.1 ACGATATTTAATTCGCCACATATATCTAGTCAACTCAATC 6 16723834 0.97049004 4 6 41 1 1 0 0.5 0.7 6 0 0 10 3L:16723811-16723850 8 9.5 1585 FBgn0000414 579.9766667 8.573333333 13.19 0.016379969 1.108087092 0.720242608 2 1 1.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 16777524 16777529 - 3L_16777524_16777529_- 0.930094567 0.993345025 0.961719796 0.044724787 CG13025 FBtr0333610|FBtr0333610|FBtr0333610|FBtr0075346|FBtr0075346|FBtr0075346 16777447|16777447|16777447|16776529|16776529|16776529 16777593|16777593|16777593|16777593|16777593|16777593 3L - 16777487 16777539 3'utr CG13025 FlyBase G37456.1 TAGCTAATTTCTGTGAAATATGTGACTACTGATATAAACGAGCTTTTAAGCTA 14 16777531 0.721034062 7 10 108 0.777777778 1.146128036 0.222222222 0.214285714 0.388888889 14 4 0 14 3L:16777487-16777539 6 CG13025 FBtr0075346|FBtr0075346|FBtr0075346|FBtr0333610|FBtr0333610|FBtr0333610 16776529|16776529|16776529|16777447|16777447|16777447 16777593|16777593|16777593|16777593|16777593|16777593 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 16777483 16777543 3'utr CG13025 FlyBase G28288.1 CTTTTAGCTAATTTCTGTGAAATATGTGACTACTGATATAAACGAGCTTTTAAGCTAAGTT 22 16777531 0.684653915 8 21 183 0.962962963 1.113943352 0.222222222 0.227272727 0.37037037 22 0 1 26 3L:16777483-16777543 6 14 1586 FBgn0036660 194.1566667 10.47 16.01333333 0.072106718 1.337153773 0.87427144 2 2 2 0.2 dme-miR-263a-5p 6mer2-7 TGCCAT 3L 16782073 16782078 + 3L_16782073_16782078_+ 0.514101266 0.820160694 0.66713098 0.216416677 CG9705 FBtr0333607|FBtr0075325|FBtr0075324 16781837|16781837|16781837 16782419|16782419|16782419 3L + 16782030 16782191 3'utr CG9705 FlyBase G30940.1 AGCCGAAACCAGACCAGAACGTAATAGAATGGAACAACAGGCCTGCCATCCAGCCAGCCAGCGAGCAGCATCACAAGAGTTTCAATTGAACACTTAATTAGAATTTAAGCTAAGCTATGGAAGTCAAACAAAACGCAGTCACAAATATTGCCTTTCCCTCTG 43 16782073 0.942980018 12 41 168 0.960784314 1.69019608 0.254901961 0.186046512 0.31372549 43 2 0 49 3L:16782030-16782191 6 CG9705 FBtr0075325|FBtr0075324|FBtr0333607 16781837|16781837|16781837 16782419|16782419|16782419 TGCCAT 6mer2-7 dme-miR-263a-5p 3L + 16782040 16782098 3'utr CG9705 FlyBase G23411.1 AGACCAGAACGTAATAGAATGGAACAACAGGCCTGCCATCCAGCCAGCCAGCGAGCAGC 18 16782073 0.825946531 3 18 22 1 1.591064607 0.384615385 0.611111111 0.820512821 18 0 0 39 3L:16782040-16782098 6 20.5 1587 FBgn0036661 2532.823333 208.9866667 321.3 0.008093735 0.098092382 0.063803299 0 0 0 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 16782352 16782358 + 3L_16782352_16782358_+ 0.547704146 0.557663202 0.552683674 0.007042147 CG9705 FBtr0333607|FBtr0075325|FBtr0075324 16781837|16781837|16781837 16782419|16782419|16782419 3L + 16782329 16782433 3'utr CG9705 FlyBase G30941.2 TTAATTATAACAAAACATCTGAATGTGTTCGCGAAGCAAACAAGCAAAATGCTCTCAGTAATTCACTTTATTATTAAAACAGCTGCAAAACAATTCCATCGGTGA 47 16782352 0.97443808 7 42 255 0.942307692 1.69019608 0.288461538 0.106382979 0.192307692 47 3 0 49 3L:16782329-16782433 7 CG9705 FBtr0075325|FBtr0075324|FBtr0333607 16781837|16781837|16781837 16782419|16782419|16782419 TGTGTTC 7mer-m8 dme-miR-317-3p 3L + 16782331 16782366 3'utr CG9705 FlyBase G23413.1 AATTATAACAAAACATCTGAATGTGTTCGCGAAGCA 21 16782352 0.741387901 3 17 107 0.862068966 0.920818754 0.172413793 0.333333333 0.517241379 21 2 2 25 3L:16782331-16782366 7 29 1588 FBgn0036661 2532.823333 208.9866667 321.3 0.011449673 0.138764833 0.090258326 0 0 0 0.2 dme-miR-277-3p 6mer3-8 TGCATT 3L 16785143 16785148 + 3L_16785143_16785148_+ 0.999990201 0.999998037 0.999994119 5.52E-06 CG9706 FBtr0075326|FBtr0075327 16785050|16785050 16785246|16785246 3L + 16785114 16785192 3'utr CG9706 FlyBase G30945.1 AACAACTAATTCTAGGATTAGCAGACGTTTGCATTCTGTAGGCTAGCGAAATTACAAATTCCCGCCTTGGTATTGTTTT 23 16785150 0.957349062 8 23 165 1 1.477121255 0.033333333 0.304347826 0.466666667 23 0 0 30 3L:16785114-16785192 6 CG9706 FBtr0075326|FBtr0075327 16785050|16785050 16785246|16785246 TGCATT 6mer3-8 dme-miR-277-3p 3L + 16785121 16785164 3'utr CG9706 FlyBase G23415.1 AATTCTAGGATTAGCAGACGTTTGCATTCTGTAGGCTAGCGAAA 9 16785142 0.974375068 3 9 61 1 1.204119983 0.375 0.555555556 0.75 9 0 0 16 3L:16785121-16785164 6 12.5 1589 FBgn0036662 379.6666667 23.33333333 36.06666667 0.032923617 0.535714286 0.346580407 -7 1 -3 0.2 dme-bantam-3p 7mer-m8 TGATCTC 3L 16787891 16787897 - 3L_16787891_16787897_- 0.639600198 0.592989666 0.616294932 0.032958601 CG9674 FBtr0345074|FBtr0305916|FBtr0333608|FBtr0075344 16787571|16787571|16787571|16787571 16792436|16788409|16788409|16788409 3L - 16787882 16787909 3'utr CG9674 FlyBase G37477.1 AAATTGATATGCTGATCTCCACCATCCT 15 16787898 0.690610132 4 12 90 0.909090909 1.301029996 0.454545455 0.2 0.454545455 15 2 0 20 3L:16787882-16787909 7 CG9674 FBtr0075344|FBtr0305916|FBtr0333608|FBtr0345074 16787571|16787571|16787571|16787571 16788409|16788409|16788409|16792436 TGATCTC 7mer-m8 dme-bantam-3p 3L - 16787882 16787911 3'utr CG9674 FlyBase G28307.1 GAAAATTGATATGCTGATCTCCACCATCCT 13 16787897 0.718071018 3 11 75 0.764705882 0.636822098 0.529411765 0.307692308 0.470588235 13 2 2 13 3L:16787882-16787911 7 14 1590 FBgn0036663 1912.666667 32.48 50.08 0.007319624 0.431034483 0.279552716 1 0 0.5 0.2 dme-miR-8-3p 6mer3-8 CAGTAT 3L 16789590 16789595 - 3L_16789590_16789595_- 0.999999892 0.999925674 0.999962783 5.25E-05 CG9674 FBtr0345074|FBtr0333609|FBtr0305915 16787571|16788247|16788247 16792436|16792331|16792331 3L - 16789574 16789622 5'utr CG9674 FlyBase G37486.1 CGCAACGATCGCGTTGGTGGACTTTTGCAGTATGGTATTCCCACGATGA 11 16789606 0.851354766 6 11 78 1 1.230448921 0.294117647 0.454545455 0.647058824 11 0 0 17 3L:16789574-16789622 6 CG9674 FBtr0333609|FBtr0305915|FBtr0345074 16788247|16788247|16787571 16792331|16792331|16792436 CAGTAT 6mer3-8 dme-miR-8-3p 3L - 16789554 16789625 5'utr CG9674 FlyBase G28311.1 GAGCGCAACGATCGCGTTGGTGGACTTTTGCAGTATGGTATTCCCACGATGAAGCTTTCCAAGGAGGTGGTC 7 16789598 0.983758966 4 7 55 1 1.113943352 0.384615385 0.428571429 0.692307692 7 0 0 13 3L:16789554-16789625 6 5.5 1591 FBgn0036663 1912.666667 32.48 50.08 0.002875566 0.169334975 0.109824281 11 3 7 0.2 dme-miR-307a-3p 7mer-m8 GGTTGTG 3L 16791639 16791645 - 3L_16791639_16791645_- 0.565365224 0.686587003 0.625976114 0.085716757 CG9674 FBtr0345074|FBtr0333609|FBtr0305915 16787571|16788247|16788247 16792436|16792331|16792331 3L - 16791617 16791691 intron-5'utr CG9674 FlyBase G37491.1 GTGTGATTGTTCAGGCTGATGGACAGCTCCGCACAGGATTCGATGTGGTTGTGGCTGCACTGCTGGGTGCTGATG 12 16791642 0.972398425 9 12 76 1 1.146128036 0.214285714 0.166666667 0.285714286 12 0 0 14 3L:16791617-16791691 7 CG9674 FBtr0333609|FBtr0305915|FBtr0345074 16788247|16788247|16787571 16792331|16792331|16792436 GGTTGTG 7mer-m8 dme-miR-307a-3p 3L - 16791630 16791660 5'utr CG9674 FlyBase G28316.1 CACAGGATTCGATGTGGTTGTGGCTGCACTG 8 16791646 0.693964738 4 8 53 1 1.146128036 0.571428571 0.5 0.714285714 8 0 0 14 3L:16791630-16791660 7 7.5 1592 FBgn0036663 1912.666667 32.48 50.08 0.003921227 0.23091133 0.149760383 -3 1 -1 0.2 dme-miR-1003-3p 6mer2-7 TGTGAG 3L 16857476 16857481 + 3L_16857476_16857481_+ 0.906154575 0.755655532 0.830905053 0.106418934 sina FBtr0075333|FBtr0075332|FBtr0344230 16857361|16857361|16857361 16858712|16858712|16858712 3L + 16857453 16857501 3'utr sina FlyBase G30993.2 AGGCGTCTAACTCGTGGACAGATTGTGAGTCTGGAGATTAAGAAGAAAG 24 16857477 0.676598129 7 22 117 1 1.462397998 0.551724138 0.166666667 0.310344828 24 0 0 29 3L:16857453-16857501 6 sina FBtr0075333|FBtr0075332|FBtr0344230 16857361|16857361|16857361 16858712|16858712|16858712 TGTGAG 6mer2-7 dme-miR-1003-3p 3L + 16857429 16857519 3'utr sina FlyBase G23452.1 AGTTTATAGCCCTCTGTTCGCATCAGGCGTCTAACTCGTGGACAGATTGTGAGTCTGGAGATTAAGAAGAAAGAGTTTTGCAGAGTTGTTT 23 16857477 0.969975085 8 23 135 1 1.544068044 0.485714286 0.347826087 0.571428571 23 0 0 35 3L:16857429-16857519 6 19 1593 FBgn0003410 433.1466667 16.57 25.46666667 0.04386505 1.146650573 0.746073298 -1 -1 -1 0.2 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 16994830 16994836 - 3L_16994830_16994836_- 0.803304105 0.817405502 0.810354803 0.009971196 CG3764 FBtr0321285|FBtr0075297|FBtr0332122 16994715|16994715|16994715 16995408|16995408|16995408 3L - 16994823 16994858 3'utr CG3764 FlyBase G37507.1 AAGTTTAGAATACGCTAGGGATGCAGCTACTAAAAT 35 16994837 0.819794337 4 32 162 0.925 0.966141733 0.225 0.114285714 0.225 35 0 3 37 3L:16994823-16994858 7 CG3764 FBtr0332122|FBtr0321285|FBtr0075297 16994715|16994715|16994715 16995408|16995408|16995408 GCAGCTA 7mer-A1 dme-miR-980-3p 3L - 16994823 16994858 3'utr CG3764 FlyBase G28331.1 AAGTTTAGAATACGCTAGGGATGCAGCTACTAAAAT 29 16994837 0.797038955 4 26 112 0.930232558 1.301029996 0.11627907 0.379310345 0.581395349 29 2 1 40 3L:16994823-16994858 7 31.5 1594 FBgn0036684 919.4833333 18.43 28.02333333 0.03425837 1.709169832 1.124063281 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 16995271 16995277 - 3L_16995271_16995277_- 0.796607406 0.79564163 0.796124518 0.000682924 CG3764 FBtr0321285|FBtr0321285|FBtr0321285|FBtr0075297|FBtr0075297|FBtr0075297|FBtr0332122|FBtr0332122|FBtr0332122 16994715|16994715|16994715|16994715|16994715|16994715|16994715|16994715|16994715 16995408|16995408|16995408|16995408|16995408|16995408|16995408|16995408|16995408 3L - 16995191 16995444 stop_codon CG3764 FlyBase G37509.2 AAGATCAGCCGCAAGTGCGGCATCAGCTTCAGGTGACAGGTTGTTGCCGTCTGCTGAGCTAGGACATTGCCAAACATTTTATCACTCAACGTTTCAAAGAGCTCTTCTCATGCATCATCCAAAGCGAAACAAGCAAATACTCCAGCGAATTTTAATTTCACTGATTTTGTGATATATTTATATATGTGTAGGAATCTAGCGCCTAAATGCAGGATACGTTTATGAGCCGTAGCTTAGCCGTAGCCCTCGAACGA 438 16995279 0.941714361 46 399 4122 0.914342629 1.457692703 0.109561753 0.116438356 0.229083665 438 28 15 459 3L:16995191-16995444 7 CG3764 FBtr0332122|FBtr0332122|FBtr0332122|FBtr0321285|FBtr0321285|FBtr0321285|FBtr0075297|FBtr0075297|FBtr0075297 16994715|16994715|16994715|16994715|16994715|16994715|16994715|16994715|16994715 16995408|16995408|16995408|16995408|16995408|16995408|16995408|16995408|16995408 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 16995196 16995461 stop_codon CG3764 FlyBase G28333.2 CATATATTCACACGCCCAAGATCAGCCGCAAGTGCGGCATCAGCTTCAGGTGACAGGTTGTTGCCGTCTGCTGAGCTAGGACATTGCCAAACATTTTATCACTCAACGTTTCAAAGAGCTCTTCTCATGCATCATCCAAAGCGAAACAAGCAAATACTCCAGCGAATTTTAATTTCACTGATTTTGTGATATATTTATATATGTGTAGGAATCTAGCGCCTAAATGCAGGATACGTTTATGAGCCGTAGCTTAGCCGTAGCCCTCG 313 16995279 0.989109754 38 262 2654 0.856275304 1.450249108 0.133603239 0.38658147 0.611336032 313 57 14 423 3L:16995196-16995461 7 193.5 1595 FBgn0036684 919.4833333 18.43 28.02333333 0.210444271 10.49918611 6.904960152 2 2 2 0.2 dme-bantam-3p 6mer2-7 GATCTC 3L 17037468 17037473 - 3L_17037468_17037473_- 0.981842325 0.999814963 0.990828644 0.012708618 scaf6 FBtr0345067 17036857 17039577 3L - 17037447 17037486 5'utr scaf6 FlyBase G37552.1 AAGGGTCGCAATCGATCTCCTCGCCACGAACGGGACAACA 6 17037466 0.940005926 2 6 24 1 0.77815125 0.166666667 0 0 6 0 0 6 3L:17037447-17037486 6 scaf6 FBtr0345067 17036857 17039577 GATCTC 6mer2-7 dme-bantam-3p 3L - 17037455 17037496 5'utr scaf6 FlyBase G28362.1 TAACAACCGCAAGGGTCGCAATCGATCTCCTCGCCACGAACG 6 17037475 0.937522995 3 6 24 1 0.903089987 0.5 0.333333333 0.5 6 0 0 8 3L:17037455-17037496 6 6 1596 FBgn0261872 719.3333333 34.71333333 53.11 0.008341057 0.172844248 0.112973075 -7 2 -2.5 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3L 17041316 17041322 - 3L_17041316_17041322_- 0.82148469 0.822396419 0.821940555 0.000644669 scaf6 FBtr0301554 17040932 17041684 3L - 17041291 17041347 5'utr scaf6 FlyBase G37556.1 ATATACTTTCGGACTTAAATGATTTCCAAAGATATTGTCATAGACTCATAGATGGCA 6 17041324 0.98004601 3 6 48 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3L:17041291-17041347 7 scaf6 FBtr0301554 17040932 17041684 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 17041292 17041338 5'utr scaf6 FlyBase G28366.1 CGGACTTAAATGATTTCCAAAGATATTGTCATAGACTCATAGATGGC 10 17041324 0.753904865 4 10 71 1 1.041392685 0 0.1 0.181818182 10 0 0 11 3L:17041292-17041338 7 7 1597 FBgn0261872 719.3333333 34.71333333 53.11 0.009731233 0.201651623 0.131801921 2 2 2 0.2 dme-miR-932-5p 7mer-A1 GAATTGA 3L 17054769 17054775 + 3L_17054769_17054775_+ 0.823187962 0.82321575 0.823201856 1.97E-05 rogdi FBtr0075282|FBtr0075283 17054365|17054365 17055454|17055454 3L + 17054726 17054822 3'utr rogdi FlyBase G31086.1 CTCCAATTATGCATCAAAATGCATCTAAATAGCATTAGGCTGAGAATTGAGAACAGAGAACGTTTGTGAAAACCAATTGTGTTTGTATGTGTAACAA 53 17054760 0.927686308 10 53 244 1 1.806179974 0.265625 0.132075472 0.28125 53 0 0 64 3L:17054726-17054822 7 rogdi FBtr0075283|FBtr0075282 17054365|17054365 17055454|17055454 GAATTGA 7mer-A1 dme-miR-932-5p 3L + 17054746 17054821 3'utr rogdi FlyBase G23516.1 GCATCTAAATAGCATTAGGCTGAGAATTGAGAACAGAGAACGTTTGTGAAAACCAATTGTGTTTGTATGTGTAACA 36 17054772 0.688269252 8 35 150 1 1.77815125 0.133333333 0.444444444 0.666666667 36 0 0 60 3L:17054746-17054821 7 35 1598 FBgn0036697 653.9633333 39.12 59.84 0.05351982 0.894683027 0.584893048 9 -3 3 0.2 dme-miR-252-5p 7mer-m8 GTACTTA 3L 17055319 17055325 + 3L_17055319_17055325_+ 0.585562779 0.585309648 0.585436213 0.000179039 rogdi FBtr0075282|FBtr0075283 17054365|17054365 17055454|17055454 3L + 17055306 17055331 3'utr rogdi FlyBase G31088.1 AACAATTACCACTGTACTTATTGAAT 8 17055318 0.7761632 3 8 58 1 1.041392685 0 0.375 0.545454545 8 0 0 11 3L:17055306-17055331 7 rogdi FBtr0075283|FBtr0075282 17054365|17054365 17055454|17055454 GTACTTA 7mer-m8 dme-miR-252-5p 3L + 17055299 17055328 3'utr rogdi FlyBase G23518.1 CAACGAAAACAATTACCACTGTACTTATTG 8 17055318 0.96245563 3 7 52 0.909090909 1 0.636363636 0.25 0.454545455 8 1 0 10 3L:17055299-17055328 7 8 1599 FBgn0036697 653.9633333 39.12 59.84 0.012233102 0.204498978 0.13368984 1 1 1 0.2 dme-miR-276a-3p 6mer3-8 AGTTCC 3L 1716321 1716326 - 3L_1716321_1716326_- 0.702270542 0.70759494 0.704932741 0.003764919 drpr FBtr0334080|FBtr0309845 1715593|1715708 1716704|1716704 3L - 1716305 1716359 3'utr drpr FlyBase G33460.1 ACCAACCTGGACAACGTGTCGACGGCGTCGCCTAGTTCCAGTCCGAAATTTCTAA 7 1716324 0.9526497 4 7 32 1 1 0 0.428571429 0.6 7 0 0 10 3L:1716305-1716359 6 drpr FBtr0309845|FBtr0334080 1715708|1715593 1716704|1716704 AGTTCC 6mer3-8 dme-miR-276a-3p 3L - 1716313 1716345 3'utr drpr FlyBase G25308.1 CGTGTCGACGGCGTCGCCTAGTTCCAGTCCGAA 5 1716324 0.739953545 2 5 26 1 0.84509804 0.285714286 0.2 0.428571429 5 0 0 7 3L:1716313-1716345 6 5 1600 FBgn0027594 1820.973333 52.11666667 79.25333333 0.002745784 0.095938599 0.063088829 -2 -2 -2 0.2 dme-miR-283-5p 8mer-m1 TGATATTT 3L 174070 174077 + 3L_174070_174077_+ 0.506641448 0.486170494 0.496405971 0.014475112 p130CAS FBtr0299866|FBtr0072475|FBtr0299864|FBtr0299865|FBtr0301889 173907|173907|173907|173907|173907 174517|174517|174517|174517|174517 3L + 174048 174092 3'utr p130CAS FlyBase G26680.1 TTGCCGCTTATATTTTGCATTGTGATATTTTGAGCAAAACATCTG 23 174067 0.988120099 9 20 254 0.891891892 1.041392685 0.054054054 0.347826087 0.594594595 23 2 2 33 3L:174048-174092 8 p130CAS FBtr0299865|FBtr0299864|FBtr0072475|FBtr0299866|FBtr0301889 173907|173907|173907|173907|173907 174517|174517|174517|174517|174517 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 174049 174086 3'utr p130CAS FlyBase G20176.1 TGCCGCTTATATTTTGCATTGTGATATTTTGAGCAAAA 16 174066 0.664186215 5 14 176 0.769230769 0.823908741 0.269230769 0.4375 0.653846154 16 4 2 20 3L:174049-174086 8 19.5 1601 FBgn0035101 655.3333333 27.27 41.73 0.029755849 0.715071507 0.46728972 3 4 3.5 0.2 dme-miR-184-5p 8mer-m1 TGATAAGG 3L 17429142 17429149 - 3L_17429142_17429149_- 0.559259949 0.526522487 0.542891218 0.023148838 frc FBtr0299820 17428934 17431853 3L - 17429122 17429175 stop_codon frc FlyBase G37592.1 TGGGCATTACTGTGCTGAATAAAGCTTGATAAGGCTGTTTATTTTTAAGCCCAT 36 17429146 0.991150602 4 34 364 0.948717949 1.091080469 0.102564103 0.055555556 0.128205128 36 0 2 37 3L:17429122-17429175 8 frc FBtr0299820 17428934 17431853 TGATAAGG 8mer-m1 dme-miR-184-5p 3L - 17429124 17429165 stop_codon frc FlyBase G28385.1 TGTGCTGAATAAAGCTTGATAAGGCTGTTTATTTTTAAGCCC 10 17429146 0.883782039 3 10 93 1 1.204119983 0.125 0.4 0.625 10 0 0 16 3L:17429124-17429165 8 22 1602 FBgn0042641 378.7 26.37333333 40.25 0.058093478 0.834175935 0.546583851 -3 -3 -3 0.2 dme-miR-970-3p 8mer-A1 TCTTATGA 3L 17477817 17477824 - 3L_17477817_17477824_- 0.630170136 0.630316114 0.630243125 0.000103238 CG13733 FBtr0075225 17477793 17477948 3L - 17477810 17477841 3'utr CG13733 FlyBase G37602.1 ACATACATATATAGATCTCTTATGAACAGTAA 30 17477822 0.702536344 4 30 224 1 1.633468456 0 0.266666667 0.488372093 30 0 0 43 3L:17477810-17477841 8 CG13733 FBtr0075225 17477793 17477948 TCTTATGA 8mer-A1 dme-miR-970-3p 3L - 17477811 17477841 3'utr CG13733 FlyBase G28400.1 ACATACATATATAGATCTCTTATGAACAGTA 23 17477821 0.71618281 5 23 174 1 1.544068044 0 0.391304348 0.6 23 0 0 35 3L:17477811-17477841 8 26.5 1603 FBgn0036729 1.666666667 0.2 0.32 15.9 132.5 82.8125 -2 -3 -2.5 0.2 dme-miR-92b-3p 6mer3-8 GTGCAA 3L 17511461 17511466 + 3L_17511461_17511466_+ 0.958956899 0.955697455 0.957327177 0.002304744 Oatp74D FBtr0075173|FBtr0345117|FBtr0345118|FBtr0302041 17511094|17511094|17511094|17511094 17511693|17511693|17511693|17511693 3L + 17511439 17511476 3'utr Oatp74D FlyBase G31136.1 TACTACAAACTGATCGACAATTGTGCAAAGTGCAAGAA 16 17511459 0.749004196 3 16 72 1 1.322219295 0.333333333 0.3125 0.476190476 16 0 0 21 3L:17511439-17511476 6 Oatp74D FBtr0302041|FBtr0345118|FBtr0345117|FBtr0075173 17511094|17511094|17511094|17511094 17511693|17511693|17511693|17511693 GTGCAA 6mer3-8 dme-miR-92b-3p 3L + 17511439 17511471 3'utr Oatp74D FlyBase G23553.1 TACTACAAACTGATCGACAATTGTGCAAAGTGC 16 17511459 0.729533522 2 14 79 0.884615385 1.06069784 0.807692308 0.4375 0.653846154 16 2 1 23 3L:17511439-17511471 6 15 1604 FBgn0036732 1106.486667 32.79 50.10666667 0.013556422 0.457456542 0.299361362 2 2 2 0.2 dme-miR-92b-3p 6mer3-8 GTGCAA 3L 17525937 17525942 - 3L_17525937_17525942_- 0.979854334 0.985596077 0.982725206 0.004060066 Edc3 FBtr0075208 17525331 17526958 3L - 17525921 17526032 3'utr Edc3 FlyBase G37610.1 CATCGAATACTAAAAAGAAACCACAACACAATACTTATAATATAAACTGTAGAGCGATTAATTTTATATAAGATTAAATCCAATCTAATAGTGCAAAATTTTAGAAGGTTGC 32 17525944 0.982202803 5 31 222 0.948717949 1.568201724 0 0.1875 0.333333333 32 2 0 37 3L:17525921-17526032 6 Edc3 FBtr0075208 17525331 17526958 GTGCAA 6mer3-8 dme-miR-92b-3p 3L - 17525919 17525985 3'utr Edc3 FlyBase G28407.1 TGTAGAGCGATTAATTTTATATAAGATTAAATCCAATCTAATAGTGCAAAATTTTAGAAGGTTGCGA 20 17525944 0.980601489 3 19 141 1 1.462397998 0 0.3 0.517241379 20 0 0 29 3L:17525919-17525985 6 21.5 1605 FBgn0036735 1377.103333 41.10333333 63.21333333 0.015612481 0.523071933 0.340118119 2 2 2 0.2 dme-miR-7-5p 6mer3-8 GTCTTC 3L 17526409 17526414 - 3L_17526409_17526414_- 0.989614234 0.99653316 0.993073697 0.004892472 Edc3 FBtr0075208 17525331 17526958 3L - 17526393 17526442 3'utr Edc3 FlyBase G37613.1 TTACAATTCACTGTCCTTCCTGCAAGTGGTCTTCATAATCGTAAACAACA 16 17526416 0.85685172 3 16 136 1 1.204119983 0 0 0 16 0 0 16 3L:17526393-17526442 6 Edc3 FBtr0075208 17525331 17526958 GTCTTC 6mer3-8 dme-miR-7-5p 3L - 17526390 17526445 3'utr Edc3 FlyBase G28410.1 AATTTACAATTCACTGTCCTTCCTGCAAGTGGTCTTCATAATCGTAAACAACAAAT 15 17526416 0.905317979 5 12 121 0.769230769 1.301029996 0.076923077 0.466666667 0.692307692 15 6 0 20 3L:17526390-17526445 6 13 1606 FBgn0036735 1377.103333 41.10333333 63.21333333 0.009440105 0.316276052 0.205652816 2 2 2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 17526799 17526804 - 3L_17526799_17526804_- 0.997941872 0.999618823 0.998780347 0.001185747 Edc3 FBtr0075208|FBtr0075208|FBtr0075208 17525331|17525331|17525331 17526958|17526958|17526958 3L - 17526739 17526857 3'utr Edc3 FlyBase G37616.1 AACAATAACAATGACACACCCGCACACTTGTGATGATCATCAAGTCCAGTTTCCTGTGAATCTAGCTCTTAGTACTCTTCTCTCATATATTACTCAAGTTAAACATTTTGTTCTACGGC 151 17526829 0.986511311 23 133 1144 0.876344086 1.257945095 0.080645161 0.17218543 0.327956989 151 15 8 163 3L:17526739-17526857 6 Edc3 FBtr0075208|FBtr0075208|FBtr0075208 17525331|17525331|17525331 17526958|17526958|17526958 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 17526764 17526847 3'utr Edc3 FlyBase G28414.1 ATGACACACCCGCACACTTGTGATGATCATCAAGTCCAGTTTCCTGTGAATCTAGCTCTTAGTACTCTTCTCTCATATATTACT 110 17526808 0.796905252 19 99 883 0.911949686 1.207125493 0.100628931 0.345454545 0.547169811 110 6 8 145 3L:17526764-17526847 6 58 1607 FBgn0036735 1377.103333 41.10333333 63.21333333 0.042117391 1.411077771 0.917527948 25 4 14.5 0.2 dme-miR-2a-2-5p 6mer3-8 TGATGA 3L 17526822 17526827 - 3L_17526822_17526827_- 0.717066699 0.624893706 0.670980203 0.065176153 Edc3 FBtr0075208 17525331 17526958 3L - 17526739 17526857 3'utr Edc3 FlyBase G37616.1 AACAATAACAATGACACACCCGCACACTTGTGATGATCATCAAGTCCAGTTTCCTGTGAATCTAGCTCTTAGTACTCTTCTCTCATATATTACTCAAGTTAAACATTTTGTTCTACGGC 151 17526829 0.986511311 23 133 1144 0.876344086 1.257945095 0.080645161 0.17218543 0.327956989 151 15 8 163 3L:17526739-17526857 6 Edc3 FBtr0075208 17525331 17526958 TGATGA 6mer3-8 dme-miR-2a-2-5p 3L - 17526764 17526847 3'utr Edc3 FlyBase G28414.1 ATGACACACCCGCACACTTGTGATGATCATCAAGTCCAGTTTCCTGTGAATCTAGCTCTTAGTACTCTTCTCTCATATATTACT 110 17526808 0.796905252 19 99 883 0.911949686 1.207125493 0.100628931 0.345454545 0.547169811 110 6 8 145 3L:17526764-17526847 6 51.5 1608 FBgn0036735 1377.103333 41.10333333 63.21333333 0.037397339 1.252939745 0.81470154 2 -19 -8.5 0.2 dme-miR-252-5p 7mer-m8 GTACTTA 3L 17545826 17545832 + 3L_17545826_17545832_+ 0.588233502 0.588298195 0.588265848 4.57E-05 Nedd4 FBtr0300520|FBtr0299642|FBtr0331843|FBtr0299647|FBtr0299645|FBtr0299648|FBtr0300519|FBtr0331844|FBtr0299646 17545609|17545609|17545609|17545609|17545609|17545609|17545609|17545609|17545609 17546376|17546376|17546376|17546376|17546376|17546376|17546660|17546376|17546376 3L + 17545812 17545897 3'utr Nedd4 FlyBase G31149.1 CGCCAGCAGATCGTGTACTTATTTGTTCGTTTGCTTTTGTATTATAATCATTTTTGCTAGTTTAGTGTTATTTCGTATGTATTTTA 23 17545825 0.991552874 9 19 214 0.892857143 0.920818754 0.142857143 0.173913043 0.321428571 23 1 2 25 3L:17545812-17545897 7 Nedd4 FBtr0299646|FBtr0331844|FBtr0300519|FBtr0299648|FBtr0299645|FBtr0299647|FBtr0331843|FBtr0299642|FBtr0300520 17545609|17545609|17545609|17545609|17545609|17545609|17545609|17545609|17545609 17546376|17546376|17546660|17546376|17546376|17546376|17546376|17546376|17546376 GTACTTA 7mer-m8 dme-miR-252-5p 3L + 17545811 17545847 3'utr Nedd4 FlyBase G23564.2 CCGCCAGCAGATCGTGTACTTATTTGTTCGTTTGCTT 21 17545833 0.648828154 6 17 172 0.787878788 0.716003344 0.121212121 0.333333333 0.575757576 21 3 4 26 3L:17545811-17545847 7 17.5 1609 FBgn0259174 1914.91 63.1 97.11 0.009138811 0.277337559 0.180208012 1 -7 -3 0.2 dme-miR-79-3p 7mer-m8 TAGCTTT 3L 17551897 17551903 - 3L_17551897_17551903_- 0.618528073 0.617785598 0.618156836 0.000525027 CycT FBtr0333125|FBtr0333124 17551002|17551002 17552803|17552803 3L - 17551882 17551923 3'utr CycT FlyBase G37630.1 GATCGCCTGGAACGTTGACGTAGCTTTCATTTGTTTTAATTT 13 17551903 0.782869023 7 12 113 0.923076923 1.079181246 0.461538462 0 0 13 1 0 12 3L:17551882-17551923 7 CycT FBtr0333125|FBtr0333124 17551002|17551002 17552803|17552803 TAGCTTT 7mer-m8 dme-miR-79-3p 3L - 17551882 17551933 3'utr CycT FlyBase G28426.1 TATGTTTCAAGATCGCCTGGAACGTTGACGTAGCTTTCATTTGTTTTAATTT 13 17551893 0.975113041 6 13 113 1 1.322219295 0.333333333 0.461538462 0.666666667 13 0 0 21 3L:17551882-17551933 7 11.5 1610 FBgn0025455 628.69 14.30666667 21.88666667 0.018292004 0.803821062 0.525434054 0 -10 -5 0.2 dme-miR-305-5p 6mer3-8 AGTACA 3L 17552323 17552328 - 3L_17552323_17552328_- 0.998205415 0.607906851 0.803056133 0.275982716 CycT FBtr0333125|FBtr0333124 17551002|17551002 17552803|17552803 3L - 17552301 17552343 3'utr CycT FlyBase G37633.1 AATCAAGAGATATATAGTACAGACTTCCGCTTAGCAAATATAC 21 17552329 0.810129816 5 18 121 0.8 0.823908741 0.12 0.19047619 0.32 21 3 2 20 3L:17552301-17552343 6 CycT FBtr0333125|FBtr0333124 17551002|17551002 17552803|17552803 AGTACA 6mer3-8 dme-miR-305-5p 3L - 17552311 17552343 3'utr CycT FlyBase G28430.1 AATCAAGAGATATATAGTACAGACTTCCGCTTA 8 17552329 0.785416965 3 7 41 0.909090909 1 0 0.25 0.454545455 8 1 0 10 3L:17552311-17552343 6 14 1611 FBgn0025455 628.69 14.30666667 21.88666667 0.022268527 0.978564772 0.639658849 1 1 1 0.2 dme-miR-92b-3p 7mer-m8 GTGCAAT 3L 17560428 17560434 - 3L_17560428_17560434_- 0.658720354 0.658995589 0.658857971 0.000194596 Eip74EF FBtr0075203|FBtr0075204|FBtr0100411|FBtr0075202|FBtr0305796 17560156|17560156|17558670|17560156|17560156 17561769|17561769|17561769|17561769|17561769 3L - 17560408 17560458 3'utr Eip74EF FlyBase G37660.1 CAATTTCCAAACACTGCCCAAAACGTGCAATCTCTTGAAAGGATACCTTGA 11 17560433 0.887387584 5 10 53 0.916666667 1.041392685 0.083333333 0.090909091 0.166666667 11 1 0 11 3L:17560408-17560458 7 Eip74EF FBtr0075203|FBtr0305796|FBtr0075202|FBtr0100411|FBtr0075204 17560156|17560156|17560156|17558670|17560156 17561769|17561769|17561769|17561769|17561769 GTGCAAT 7mer-m8 dme-miR-92b-3p 3L - 17560401 17560444 3'utr Eip74EF FlyBase G28448.1 TGCCCAAAACGTGCAATCTCTTGAAAGGATACCTTGAATAGGAA 6 17560433 0.96192971 3 6 34 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 3L:17560401-17560444 7 7 1612 FBgn0000567 175.3133333 4.123333333 6.33 0.039928509 1.697655618 1.105845182 -1 -1 -1 0.2 dme-miR-33-5p 8mer-A1 CAATGCAA 3L 17560479 17560486 - 3L_17560479_17560486_- 0.46232035 0.410197114 0.436258732 0.036856668 Eip74EF FBtr0075203|FBtr0075204|FBtr0100411|FBtr0075202|FBtr0305796 17560156|17560156|17558670|17560156|17560156 17561769|17561769|17561769|17561769|17561769 3L - 17560467 17560498 3'utr Eip74EF FlyBase G37661.1 AACCGCAATCCTCAATGCAATATACCGACAAC 5 17560478 0.794724932 2 3 14 0.714285714 0.698970004 0 0.4 0.571428571 5 2 0 5 3L:17560467-17560498 8 Eip74EF FBtr0075203|FBtr0305796|FBtr0075202|FBtr0100411|FBtr0075204 17560156|17560156|17560156|17558670|17560156 17561769|17561769|17561769|17561769|17561769 CAATGCAA 8mer-A1 dme-miR-33-5p 3L - 17560465 17560502 3'utr Eip74EF FlyBase G28449.1 CTGCAACCGCAATCCTCAATGCAATATACCGACAACTT 7 17560484 0.968354673 3 4 27 0.8 0.602059991 0.1 0.285714286 0.5 7 1 1 8 3L:17560465-17560502 8 5.5 1613 FBgn0000567 175.3133333 4.123333333 6.33 0.0313724 1.333872272 0.868878357 -8 -2 -5 0.2 dme-bantam-3p 6mer3-8 TGATCT 3L 17561167 17561172 - 3L_17561167_17561172_- 0.949871267 0.944307541 0.947089404 0.003934201 Eip74EF FBtr0075203|FBtr0075204|FBtr0100411|FBtr0075202|FBtr0305796 17560156|17560156|17558670|17560156|17560156 17561769|17561769|17561769|17561769|17561769 3L - 17561154 17561193 3'utr Eip74EF FlyBase G37664.1 CAAGAATTTCTCTATCTCTATTGATCTAATGCTAAATCTA 17 17561173 0.699280383 5 16 160 0.954545455 1.322219295 0.136363636 0.235294118 0.409090909 17 1 0 21 3L:17561154-17561193 6 Eip74EF FBtr0075203|FBtr0305796|FBtr0075202|FBtr0100411|FBtr0075204 17560156|17560156|17560156|17558670|17560156 17561769|17561769|17561769|17561769|17561769 TGATCT 6mer3-8 dme-bantam-3p 3L - 17561157 17561192 3'utr Eip74EF FlyBase G28451.1 AAGAATTTCTCTATCTCTATTGATCTAATGCTAAAT 7 17561173 0.721636197 4 7 74 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3L:17561157-17561192 6 12 1614 FBgn0000567 175.3133333 4.123333333 6.33 0.068448872 2.910266774 1.895734597 1 1 1 0.2 dme-miR-283-5p 7mer-m8 TGATATT 3L 17561240 17561246 - 3L_17561240_17561246_- 0.462847656 0.584390966 0.523619311 0.085944092 Eip74EF FBtr0075203|FBtr0075204|FBtr0100411|FBtr0075202|FBtr0305796 17560156|17560156|17558670|17560156|17560156 17561769|17561769|17561769|17561769|17561769 3L - 17561205 17561278 3'utr Eip74EF FlyBase G37665.1 AGAGGACGAAGGACGACCGAATTGATTCATATTGATATTCGATAGATGTGTGTAATATGTAAATGAGTACGAAC 12 17561257 0.983680556 5 9 68 0.714285714 1 0.285714286 0.083333333 0.214285714 12 4 0 10 3L:17561205-17561278 7 Eip74EF FBtr0075203|FBtr0305796|FBtr0075202|FBtr0100411|FBtr0075204 17560156|17560156|17560156|17558670|17560156 17561769|17561769|17561769|17561769|17561769 TGATATT 7mer-m8 dme-miR-283-5p 3L - 17561225 17561271 3'utr Eip74EF FlyBase G28452.1 GAAGGACGACCGAATTGATTCATATTGATATTCGATAGATGTGTGTA 7 17561247 0.985221532 4 7 58 1 1.041392685 0.363636364 0.428571429 0.636363636 7 0 0 11 3L:17561225-17561271 7 6.5 1615 FBgn0000567 175.3133333 4.123333333 6.33 0.037076473 1.576394503 1.02685624 11 1 6 0.2 dme-bantam-3p 6mer3-8 TGATCT 3L 17561432 17561437 - 3L_17561432_17561437_- 0.979303587 0.976790262 0.978046924 0.001777171 Eip74EF FBtr0075203|FBtr0075204|FBtr0100411|FBtr0075202|FBtr0305796 17560156|17560156|17558670|17560156|17560156 17561769|17561769|17561769|17561769|17561769 3L - 17561347 17561491 3'utr Eip74EF FlyBase G37666.1 ACACCCTGTGTCCTGTACCCTATACATACACCCAGCTAAATCGACGGTAAATAATGATCTATTCATGGGCGTTAGTGTTGTACTTGTAACTGTAGATTTAACTGTAAACTGTAACTGTAATGAATATTGTTATTATTGGTTATTA 87 17561437 0.986486788 14 81 695 0.919191919 1.959041392 0.070707071 0.137931034 0.242424242 87 8 0 91 3L:17561347-17561491 6 Eip74EF FBtr0075203|FBtr0305796|FBtr0075202|FBtr0100411|FBtr0075204 17560156|17560156|17560156|17558670|17560156 17561769|17561769|17561769|17561769|17561769 TGATCT 6mer3-8 dme-bantam-3p 3L - 17561377 17561491 3'utr Eip74EF FlyBase G28453.1 ACACCCTGTGTCCTGTACCCTATACATACACCCAGCTAAATCGACGGTAAATAATGATCTATTCATGGGCGTTAGTGTTGTACTTGTAACTGTAGATTTAACTGTAAACTGTAAC 47 17561437 0.770845622 14 46 360 0.955882353 1.812913357 0.191176471 0.340425532 0.544117647 47 3 0 65 3L:17561377-17561491 6 45.5 1616 FBgn0000567 175.3133333 4.123333333 6.33 0.259535308 11.03476152 7.187993681 0 0 0 0.2 dme-miR-1008-3p 8mer-A1 AGCTGTGA 3L 1759130 1759137 + 3L_1759130_1759137_+ 0.621637814 0.626001854 0.623819834 0.003085885 CG8001 FBtr0334073|FBtr0300292|FBtr0334074|FBtr0072774 1759035|1759035|1759035|1759035 1759208|1759208|1759208|1759208 3L + 1759111 1759156 3'utr CG8001 FlyBase G27208.1 TGTTAGAAAGCGTTTCTGAAGCTGTGAATTTGTAACCGTAACACAT 72 1759126 0.678658016 8 68 594 0.952941176 1.607455023 0.235294118 0.138888889 0.270588235 72 3 1 81 3L:1759111-1759156 8 CG8001 FBtr0334074|FBtr0072774|FBtr0334073|FBtr0300292 1759035|1759035|1759035|1759035 1759208|1759208|1759208|1759208 AGCTGTGA 8mer-A1 dme-miR-1008-3p 3L + 1759106 1759156 3'utr CG8001 FlyBase G20596.1 AACTATGTTAGAAAGCGTTTCTGAAGCTGTGAATTTGTAACCGTAACACAT 55 1759127 0.71612987 8 52 453 0.941176471 1.425968732 0.458823529 0.454545455 0.647058824 55 3 2 80 3L:1759106-1759156 8 63 1617 FBgn0035268 473.3333333 22.80666667 34.95333333 0.133098592 2.76235019 1.802403204 4 3 3.5 0.2 dme-miR-308-3p 8mer-m1 CTGTGATT 3L 17630070 17630077 + 3L_17630070_17630077_+ 0.382293544 0.381768647 0.382031095 0.00037116 CG7510 FBtr0333121|FBtr0075182 17629985|17629985 17630971|17630480 3L + 17630028 17630124 3'utr CG7510 FlyBase G31157.1 CTTGATTTCCTGTTTAGTTTATTTTGAATGTAATTTTGACTGCTGTGATTGTACGCCAAACAAGAACGCACACACAATGCAGTCAGTTGTGTGTGGG 151 17630077 0.756423141 12 144 1193 0.954545455 2.225309282 0.068181818 0.125827815 0.25 151 8 0 168 3L:17630028-17630124 8 CG7510 FBtr0333121|FBtr0075182 17629985|17629985 17630971|17630480 CTGTGATT 8mer-m1 dme-miR-308-3p 3L + 17630046 17630124 3'utr CG7510 FlyBase G23571.1 TTATTTTGAATGTAATTTTGACTGCTGTGATTGTACGCCAAACAAGAACGCACACACAATGCAGTCAGTTGTGTGTGGG 111 17630077 0.79662595 11 104 864 0.977142857 2.23299611 0.165714286 0.405405405 0.622857143 111 4 0 171 3L:17630046-17630124 8 120 1618 FBgn0036741 369.9166667 11.27333333 17.24666667 0.324397387 10.644589 6.957866254 -7 -7 -7 0.2 dme-bantam-3p 7mer-m8 TGATCTC 3L 17639205 17639211 - 3L_17639205_17639211_- 0.658083 0.658894743 0.658488872 0.000573959 Pep FBtr0075198 17638116 17640026 3L - 17639025 17639256 3'utr Pep FlyBase G37680.1 CCCGCCTACCTAAGTACAACTGGCAGCGTGCTGTCGGTCCCGGTCTGATCTCCAAGCTGGAGTGCTATGAGTGCTCGGTGTGCAGCAAGTTCTTCGACACCGAGGTGACCGCCGAGATTCACTCCCGTACGGCGACTCATCACCGCAACTTCTTGAAGTTTATCAACGAGAAATCAAGCGATACCAAGATCGCACAGAAGCGCGCAGCTGCCGCCCTGGAGGAGAATGAGCG 89 17639211 0.973825908 22 76 470 0.884615385 1.264817823 0.201923077 0.146067416 0.269230769 89 8 4 92 3L:17639025-17639256 7 Pep FBtr0075198 17638116 17640026 TGATCTC 7mer-m8 dme-bantam-3p 3L - 17639168 17639258 3'utr Pep FlyBase G28467.1 TACCCGCCTACCTAAGTACAACTGGCAGCGTGCTGTCGGTCCCGGTCTGATCTCCAAGCTGGAGTGCTATGAGTGCTCGGTGTGCAGCAAG 19 17639212 0.889050501 8 17 109 0.935483871 1.462397998 0.225806452 0.421052632 0.64516129 19 2 0 29 3L:17639168-17639258 7 20 1619 FBgn0004401 3496.79 156.06 239.5966667 0.005719531 0.128155837 0.083473615 0 1 0.5 0.2 dme-miR-34-5p 7mer-m8 CACTGCC 3L 17639322 17639328 - 3L_17639322_17639328_- 0.685714859 0.427348397 0.556531628 0.182692704 Pep FBtr0075198 17638116 17640026 3L - 17639268 17639399 3'utr Pep FlyBase G37681.1 GGGTGAGGAAGCTGCTGACGAGACAAAGGAGGGCGATGAGCTAAACGAGAGCCAAGAGGAAGAGGAAGTGGCACTGCCCGTGGACCCCGAGGACTGCATCCTTGACTTCAACGACGGCGATGAGATCCCCAG 32 17639331 0.895687552 10 32 71 1 1.612783857 0.43902439 0.28125 0.43902439 32 0 0 41 3L:17639268-17639399 7 Pep FBtr0075198 17638116 17640026 CACTGCC 7mer-m8 dme-miR-34-5p 3L - 17639260 17639334 3'utr Pep FlyBase G28468.1 AAGTGGCACTGCCCGTGGACCCCGAGGACTGCATCCTTGACTTCAACGACGGCGATGAGATCCCCAGCGAGGTGG 12 17639319 0.923067419 6 12 40 1 1.278753601 0.052631579 0.416666667 0.631578947 12 0 0 19 3L:17639260-17639334 7 9 1620 FBgn0004401 3496.79 156.06 239.5966667 0.002573789 0.057670127 0.037563127 3 -9 -3 0.2 dme-miR-12-5p 7mer-A1 ATACTCA 3L 17639646 17639652 - 3L_17639646_17639652_- 0.781549857 0.773495635 0.777522746 0.00569525 Pep FBtr0075198 17638116 17640026 3L - 17639585 17639902 3'utr Pep FlyBase G37683.1 CGCCTCAAGGCCAACATGATCCGTCAGGAGGCTAAGATCGCAGAGCAGCTCAAGTCGATCGAGTTTGACCGCTTGAAGCGCATGGGCAAAAGCAAGCAGCGTCAGCTGGACTACTGCACCATGTGCGACCTGAACTTCCATGGTCACATCTCGACCCATCGCAAGTCGGAGGGACATTTGCAGCTGAAGAAGTTCTTGCACCCCAAGTGCATTGAGTGCAACAAGGAGTTCGCCACTCGCATTGACTACGATACTCATCTGCTGTCCGCCGAGCATCTGAAGAAGGCTGCCGAGAACAACACCAAGGTGGGTGAGCGC 144 17639645 0.970719689 35 132 758 0.915151515 1.480006943 0.151515152 0.125 0.236363636 144 10 4 151 3L:17639585-17639902 7 Pep FBtr0075198 17638116 17640026 ATACTCA 7mer-A1 dme-miR-12-5p 3L - 17639585 17639675 3'utr Pep FlyBase G28470.1 GTTCGCCACTCGCATTGACTACGATACTCATCTGCTGTCCGCCGAGCATCTGAAGAAGGCTGCCGAGAACAACACCAAGGTGGGTGAGCGC 29 17639645 0.978988996 7 27 177 0.857142857 0.77815125 0.333333333 0.310344828 0.523809524 29 1 5 36 3L:17639585-17639675 7 39.5 1621 FBgn0004401 3496.79 156.06 239.5966667 0.011296074 0.253107779 0.16486039 -7 -7 -7 0.2 dme-miR-980-3p 6mer2-7 GCAGCT 3L 17639718 17639723 - 3L_17639718_17639723_- 0.989968539 0.995176043 0.992572291 0.003682259 Pep FBtr0075198 17638116 17640026 3L - 17639585 17639902 3'utr Pep FlyBase G37683.1 CGCCTCAAGGCCAACATGATCCGTCAGGAGGCTAAGATCGCAGAGCAGCTCAAGTCGATCGAGTTTGACCGCTTGAAGCGCATGGGCAAAAGCAAGCAGCGTCAGCTGGACTACTGCACCATGTGCGACCTGAACTTCCATGGTCACATCTCGACCCATCGCAAGTCGGAGGGACATTTGCAGCTGAAGAAGTTCTTGCACCCCAAGTGCATTGAGTGCAACAAGGAGTTCGCCACTCGCATTGACTACGATACTCATCTGCTGTCCGCCGAGCATCTGAAGAAGGCTGCCGAGAACAACACCAAGGTGGGTGAGCGC 144 17639725 0.970719689 35 132 758 0.915151515 1.480006943 0.151515152 0.125 0.236363636 144 10 4 151 3L:17639585-17639902 6 Pep FBtr0075198 17638116 17640026 GCAGCT 6mer2-7 dme-miR-980-3p 3L - 17639680 17639809 3'utr Pep FlyBase G28471.1 AAGCAGCGTCAGCTGGACTACTGCACCATGTGCGACCTGAACTTCCATGGTCACATCTCGACCCATCGCAAGTCGGAGGGACATTTGCAGCTGAAGAAGTTCTTGCACCCCAAGTGCATTGAGTGCAACA 27 17639725 0.9583296 12 26 125 0.976744186 1.62324929 0.069767442 0.407407407 0.627906977 27 1 0 42 3L:17639680-17639809 6 23 1622 FBgn0004401 3496.79 156.06 239.5966667 0.006577461 0.147379213 0.095994658 2 2 2 0.2 dme-miR-305-3p 8mer-m1 ATGTGCCG 3L 17661159 17661166 - 3L_17661159_17661166_- 0.613696358 0.611507123 0.61260174 0.001548069 Crtc FBtr0345384|FBtr0330162 17659816|17659816 17662225|17661949 3L - 17661134 17661191 3'utr Crtc FlyBase G37712.1 ACACCCAACCCATATTATAATCCCAATGTGCCGTGGAAGCAATTACTAGAGTTTAAGA 29 17661163 0.940467417 5 29 122 1 1.51851394 0 0.137931034 0.242424242 29 0 0 33 3L:17661134-17661191 8 Crtc FBtr0345384|FBtr0330162 17659816|17659816 17662225|17661949 ATGTGCCG 8mer-m1 dme-miR-305-3p 3L - 17661132 17661178 3'utr Crtc FlyBase G28492.1 ATTATAATCCCAATGTGCCGTGGAAGCAATTACTAGAGTTTAAGATG 21 17661163 0.775153561 4 20 94 0.933333333 1.447158031 0.166666667 0.333333333 0.533333333 21 2 0 28 3L:17661132-17661178 8 24 1623 FBgn0036746 1464.6 32.19333333 49.71333333 0.016386727 0.745495962 0.482767869 -3 -3 -3 0.2 dme-miR-1008-3p 6mer3-8 AGCTGT 3L 1772287 1772292 - 3L_1772287_1772292_- 0.715458078 0.702459049 0.708958563 0.009191752 CG13933 FBtr0332881|FBtr0072792 1771807|1771807 1772601|1772601 3L - 1772278 1772343 3'utr CG13933 FlyBase G33477.1 AGATCGCTAAATTCTCTTAATTTAGGGCCAAAGGAGATACGCTTGATCTGAAGCTGTTGCGTATGA 51 1772286 0.795702591 9 48 323 0.919354839 1.153814864 0.483870968 0.117647059 0.274193548 51 2 3 57 3L:1772278-1772343 6 CG13933 FBtr0072792|FBtr0332881 1771807|1771807 1772601|1772601 AGCTGT 6mer3-8 dme-miR-1008-3p 3L - 1772272 1772344 3'utr CG13933 FlyBase G25324.1 TAGATCGCTAAATTCTCTTAATTTAGGGCCAAAGGAGATACGCTTGATCTGAAGCTGTTGCGTATGAGATATG 27 1772286 0.93916862 8 27 174 1 1.681241237 0.375 0.444444444 0.6875 27 0 0 48 3L:1772272-1772344 6 25.5 1624 FBgn0035270 373.6633333 14.21333333 21.71 0.068243249 1.794090056 1.174573929 -6 -6 -6 0.2 dme-miR-283-5p 6mer3-8 TGATAT 3L 1772388 1772393 - 3L_1772388_1772393_- 0.8432694 0.510412953 0.676841177 0.235365018 CG13933 FBtr0332881|FBtr0072792 1771807|1771807 1772601|1772601 3L - 1772367 1772430 3'utr CG13933 FlyBase G33478.1 AGCTTAACGATCAGTTCTGAAATGACTGAATTTACTTTGATATCGAAAGCGAATAGTTATGTAT 18 1772394 0.981100677 7 18 132 1 1.322219295 0.142857143 0.166666667 0.285714286 18 0 0 21 3L:1772367-1772430 6 CG13933 FBtr0072792|FBtr0332881 1771807|1771807 1772601|1772601 TGATAT 6mer3-8 dme-miR-283-5p 3L - 1772367 1772430 3'utr CG13933 FlyBase G25325.1 AGCTTAACGATCAGTTCTGAAATGACTGAATTTACTTTGATATCGAAAGCGAATAGTTATGTAT 10 1772410 0.980309726 4 10 72 1 1.146128036 0.142857143 0.4 0.571428571 10 0 0 14 3L:1772367-1772430 6 5.5 1625 FBgn0035270 373.6633333 14.21333333 21.71 0.014719132 0.3869606 0.253339475 1 17 9 0.2 dme-miR-277-3p 7mer-m8 TGCATTT 3L 17797846 17797852 - 3L_17797846_17797852_- 0.5669407 0.581422482 0.574181591 0.010240179 NUCB1 FBtr0075171 17797736 17798085 3L - 17797762 17797871 3'utr NUCB1 FlyBase G37734.1 TTCGCTTTTCCAGTAGCTCTGCATTTGCGTGATGTATTTCTCTAACGAATTTTGTGTACATATGAGTTTATACCTGAACATCAAAAACAAAATAAATGAAATGAAACGAA 85 17797846 0.989664956 15 81 792 0.949494949 1.496006599 0.212121212 0.152941176 0.272727273 85 3 2 94 3L:17797762-17797871 7 NUCB1 FBtr0075171 17797736 17798085 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 17797825 17797869 3'utr NUCB1 FlyBase G28508.2 CGCTTTTCCAGTAGCTCTGCATTTGCGTGATGTATTTCTCTAACG 58 17797847 0.780720965 6 56 568 0.967391304 1.949390007 0.173913043 0.396551724 0.619565217 58 3 0 89 3L:17797825-17797869 7 58.5 1626 FBgn0052190 2200.613333 121.53 186.3466667 0.026583498 0.481362627 0.313931025 -6 -5 -5.5 0.2 dme-miR-980-5p 6mer3-8 GAAAAA 3L 17849217 17849222 + 3L_17849217_17849222_+ 0.98708297 0.984436152 0.985759561 0.00187157 CG7430 FBtr0331810|FBtr0075140 17849144|17849144 17849372|17849601 3L + 17849195 17849248 3'utr CG7430 FlyBase G31171.1 AATCTTTGAATAACCCCTATTCGAAAAATTATCCTGACGGCCGAAACGACAGTC 10 17849223 0.967646001 5 10 57 1 1.079181246 0.5 0.1 0.25 10 0 0 12 3L:17849195-17849248 6 CG7430 FBtr0331810|FBtr0075140 17849144|17849144 17849372|17849601 GAAAAA 6mer3-8 dme-miR-980-5p 3L + 17849178 17849236 3'utr CG7430 FlyBase G23583.1 TTTTGCACCGCGTTTGAAATCTTTGAATAACCCCTATTCGAAAAATTATCCTGACGGCC 6 17849223 0.969770925 5 6 39 1 1 0.2 0.5 0.7 6 0 0 10 3L:17849178-17849236 6 6.5 1627 FBgn0036762 1043.3 65.57333333 100.5333333 0.006230231 0.099125661 0.064655172 -6 -6 -6 0.2 dme-miR-92b-3p 6mer2-7 TGCAAT 3L 17849326 17849331 + 3L_17849326_17849331_+ 0.844984776 0.999223584 0.92210418 0.109063301 CG7430 FBtr0331810|FBtr0075140 17849144|17849144 17849372|17849601 3L + 17849309 17849360 3'utr CG7430 FlyBase G31172.1 TGGCGCCAGGCGTTAATTGCAATGTAATATGTGTATTAAGCTAGAATAAATA 6 17849325 0.97142634 4 6 39 1 1.041392685 0 0.5 0.727272727 6 0 0 11 3L:17849309-17849360 6 CG7430 FBtr0331810|FBtr0075140 17849144|17849144 17849372|17849601 TGCAAT 6mer2-7 dme-miR-92b-3p 3L + 17849301 17849360 3'utr CG7430 FlyBase G23584.1 AATGGTAATGGCGCCAGGCGTTAATTGCAATGTAATATGTGTATTAAGCTAGAATAAATA 6 17849309 0.979108581 5 6 39 1 1 0.1 0.333333333 0.6 6 0 0 10 3L:17849301-17849360 6 3.5 1628 FBgn0036762 1043.3 65.57333333 100.5333333 0.00335474 0.053375356 0.034814324 1 17 9 0.2 dme-miR-92b-3p 8mer-m1 GTGCAATT 3L 17898975 17898982 - 3L_17898975_17898982_- 0.596085361 0.492703027 0.544394194 0.073102396 Prestin FBtr0075153 17898887 17899268 3L - 17898954 17899001 3'utr Prestin FlyBase G37765.1 AATGAAGTGCATTGATTTAGTGCAATTTGTACCAAAATGAACAATTCA 10 17898973 0.759709753 4 9 57 1 1.041392685 0.272727273 0.1 0.181818182 10 0 0 11 3L:17898954-17899001 8 Prestin FBtr0075153 17898887 17899268 GTGCAATT 8mer-m1 dme-miR-92b-3p 3L - 17898948 17898983 3'utr Prestin FlyBase G28535.1 AGTGCAATTTGTACCAAAATGAACAATTCAAACACA 6 17898974 0.948992985 3 6 28 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 3L:17898948-17898983 8 7 1629 FBgn0036770 2001.45 68.62666667 105.7333333 0.003497464 0.102001166 0.066204288 -9 -8 -8.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 17899204 17899210 - 3L_17899204_17899210_- 0.777636236 0.742679564 0.7601579 0.024718049 Prestin FBtr0075153|FBtr0075153|FBtr0075153 17898887|17898887|17898887 17899268|17899268|17899268 3L - 17899086 17899341 stop_codon Prestin FlyBase G37766.1 CGAAGGACCTTTTGAGATCTTCCCCACCCTGCACGATTGTGTGGAATATGCCAATGCCTGTCGAACAGCGTGAGAGGGTGTTCCTGCTCCAGACACCCCAGTTAACTGGGGCAGAGAGCCAAACCACGTTTTGTGATATGTCCAAGTGATAGCTTGTGAATCGTAGCATCAAAACCCCTTCCTAGTTGCTAAAATCTATTTTAAACTGAATAGAAACAATGTCGCCGTCTACAATCAAGCAGAATAGGCTAAGTTT 99 17899212 0.982029089 25 88 655 0.905172414 1.419129308 0.129310345 0.131313131 0.25862069 99 8 3 105 3L:17899086-17899341 7 Prestin FBtr0075153|FBtr0075153|FBtr0075153 17898887|17898887|17898887 17899268|17899268|17899268 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 17899085 17899239 3'utr Prestin FlyBase G28536.1 TAACTGGGGCAGAGAGCCAAACCACGTTTTGTGATATGTCCAAGTGATAGCTTGTGAATCGTAGCATCAAAACCCCTTCCTAGTTGCTAAAATCTATTTTAAACTGAATAGAAACAATGTCGCCGTCTACAATCAAGCAGAATAGGCTAAGTTTG 79 17899211 0.983440977 12 71 556 0.92 1.458637849 0.288 0.430379747 0.64 79 7 3 115 3L:17899085-17899239 7 67.5 1630 FBgn0036770 2001.45 68.62666667 105.7333333 0.033725549 0.98358267 0.638398487 2 1 1.5 0.2 dme-miR-283-5p 7mer-m8 TGATATT 3L 17909484 17909490 + 3L_17909484_17909490_+ 0.375201384 0.54566008 0.460430732 0.120532503 CG14353 FBtr0075144 17909436 17909683 3L + 17909463 17909502 3'utr CG14353 FlyBase G31193.1 TAAAGAAATGCTTCATACTTGTGATATTGGATGATGGGTT 58 17909481 0.699701346 8 55 529 0.96 1.556302501 0.653333333 0.172413793 0.36 58 2 1 72 3L:17909463-17909502 7 CG14353 FBtr0075144 17909436 17909683 TGATATT 7mer-m8 dme-miR-283-5p 3L + 17909466 17909505 3'utr CG14353 FlyBase G23600.1 AGAAATGCTTCATACTTGTGATATTGGATGATGGGTTAAT 47 17909481 0.62775468 9 39 439 0.838235294 0.801632346 0.602941176 0.29787234 0.514705882 47 3 8 57 3L:17909466-17909505 7 52.5 1631 FBgn0036771 185.44 15.31 23.46333333 0.28311044 3.429131287 2.237533741 3 3 3 0.2 dme-bantam-3p 6mer2-7 GATCTC 3L 17952969 17952974 - 3L_17952969_17952974_- 0.506744508 0.999935543 0.753340025 0.348738701 Eip75B FBtr0306814|FBtr0075150|FBtr0075149 17950951|17952160|17952160 17953640|17953640|17953640 3L - 17952945 17953039 3'utr Eip75B FlyBase G37797.1 ATTATTATTATTAAATTTTTAAATACCTAAAAACAAAACAATGTGTGTGAAATTTTTTATTGTGCGATCTCCAAGCAGAATTGAAGTGCAGTTTG 128 17952997 0.983848228 16 117 912 0.923566879 1.684246748 0.025477707 0.203125 0.350318471 128 10 2 145 3L:17952945-17953039 6 Eip75B FBtr0075149|FBtr0075150|FBtr0306814 17952160|17952160|17950951 17953640|17953640|17953640 GATCTC 6mer2-7 dme-bantam-3p 3L - 17952935 17953017 3'utr Eip75B FlyBase G28557.1 ATACCTAAAAACAAAACAATGTGTGTGAAATTTTTTATTGTGCGATCTCCAAGCAGAATTGAAGTGCAGTTTGCAACAAATTT 92 17952998 0.980630713 15 86 611 0.957142857 2.127104798 0.035714286 0.369565217 0.585714286 92 6 0 134 3L:17952935-17953017 6 50.5 1632 FBgn0000568 1336.92 32.88666667 50.30333333 0.03777339 1.535576728 1.003909615 23 24 23.5 0.2 dme-miR-92b-3p 7mer-m1 TGCAATT 3L 17953464 17953470 - 3L_17953464_17953470_- 0.75722698 0.713145721 0.73518635 0.031170186 Eip75B FBtr0306814|FBtr0306813|FBtr0075148|FBtr0075151|FBtr0075150|FBtr0347013|FBtr0075149 17950951|17953356|17953356|17953356|17952160|17953356|17952160 17953640|17953640|17953640|17953640|17953640|17953640|17953640 3L - 17953457 17953486 3'utr Eip75B FlyBase G37800.1 GCAAAACCAACATGCATGCAATTTAAAACT 10 17953473 0.894101181 2 8 33 0.833333333 1 0.166666667 0.2 0.333333333 10 2 0 10 3L:17953457-17953486 7 Eip75B FBtr0075149|FBtr0075150|FBtr0347013|FBtr0075148|FBtr0075151|FBtr0306814|FBtr0306813 17952160|17952160|17953356|17953356|17953356|17950951|17953356 17953640|17953640|17953640|17953640|17953640|17953640|17953640 TGCAATT 7mer-m1 dme-miR-92b-3p 3L - 17953446 17953510 3'utr Eip75B FlyBase G28560.1 TTGAGACGTGTACAAAGTTTGAAAGCAAAACCAACATGCATGCAATTTAAAACTAATATTTAAAG 10 17953474 0.928639991 5 9 55 0.916666667 1.041392685 0 0.2 0.333333333 10 1 0 11 3L:17953446-17953510 7 7 1633 FBgn0000568 1336.92 32.88666667 50.30333333 0.005235915 0.21285222 0.139155788 3 4 3.5 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 3L 1802052 1802057 + 3L_1802052_1802057_+ 0.508040799 0.722534402 0.6152876 0.151669879 Patj FBtr0301625|FBtr0072781|FBtr0072779 1801823|1801823|1801823 1802184|1802184|1802184 3L + 1802036 1802071 3'utr Patj FlyBase G27229.1 ATTATTAACGCCGAATTGTGTTTGTCCCCTGAAAAC 16 1802051 0.825775458 3 16 118 1 1.301029996 0.45 0.1875 0.35 16 0 0 20 3L:1802036-1802071 6 Patj FBtr0301625|FBtr0072781|FBtr0072779 1801823|1801823|1801823 1802184|1802184|1802184 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 1802030 1802069 3'utr Patj FlyBase G20610.1 ATGCATATTATTAACGCCGAATTGTGTTTGTCCCCTGAAA 8 1802051 0.83287874 4 8 65 1 1 0.7 0.25 0.4 8 0 0 10 3L:1802030-1802069 6 11.5 1634 FBgn0067864 663.1966667 24.43 37.27666667 0.017340256 0.470732706 0.308503979 1 1 1 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 1802151 1802158 + 3L_1802151_1802158_+ 0.446491116 0.449118257 0.447804687 0.001857711 Patj FBtr0301625|FBtr0072781|FBtr0072779 1801823|1801823|1801823 1802184|1802184|1802184 3L + 1802126 1802175 3'utr Patj FlyBase G27230.1 TTAACATGGTATTTCCAGAGTGTATGTACTTAAACTAAATTAAATAATGT 111 1802150 0.7685985 3 110 878 1 2.103803721 0.023622047 0.117117117 0.228346457 111 0 0 127 3L:1802126-1802175 8 Patj FBtr0301625|FBtr0072781|FBtr0072779 1801823|1801823|1801823 1802184|1802184|1802184 GTACTTAA 8mer-A1 dme-miR-252-5p 3L + 1802125 1802185 3'utr Patj FlyBase G20611.1 TTTAACATGGTATTTCCAGAGTGTATGTACTTAAACTAAATTAAATAATGTACCTTCCGTA 82 1802150 0.752059427 5 79 628 0.967741935 2.079181246 0.008064516 0.365853659 0.580645161 82 4 0 120 3L:1802125-1802185 8 92.5 1635 FBgn0067864 663.1966667 24.43 37.27666667 0.139475972 3.786328285 2.481445051 1 1 1 0.2 dme-bantam-3p 8mer-A1 TGATCTCA 3L 18168772 18168779 - 3L_18168772_18168779_- 0.62796794 0.618313291 0.623140616 0.006826833 hid FBtr0075133 18167743 18170010 3L - 18168761 18168804 3'utr hid FlyBase G37832.1 AAAAACCAATTCCCAAAAATCGCATTGATCTCATGGATTTATAC 30 18168780 0.742862364 5 30 214 1 1.579783597 0.026315789 0.233333333 0.394736842 30 0 0 38 3L:18168761-18168804 8 hid FBtr0075133 18167743 18170010 TGATCTCA 8mer-A1 dme-bantam-3p 3L - 18168761 18168796 3'utr hid FlyBase G28591.1 ATTCCCAAAAATCGCATTGATCTCATGGATTTATAC 20 18168780 0.776140948 2 20 136 1 1.51851394 0 0.3 0.575757576 20 0 0 33 3L:18168761-18168796 8 25 1636 FBgn0003997 37.33333333 1.456666667 2.223333333 0.669642857 17.1624714 11.24437781 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 18397836 18397842 - 3L_18397836_18397842_- 0.562415247 0.543231045 0.552823146 0.013565278 rpr FBtr0075120|FBtr0075120|FBtr0075120 18397533|18397533|18397533 18398037|18398037|18398037 3L - 18397793 18397941 3'utr rpr FlyBase G37840.1 ACAGTCACCACTCATCAGCCGACGGCACTCGATTTCTACTGCAGTCAAGGACACAGAGCCACAACACCCACCCAATTTTAGTTTACTCATCAAAGCGATTGTGATAATGGTTTTGTTTCTACAAAAAAGCGGAGGAAAAATTTGAAAAA 3183 18397843 0.973742105 27 3002 26899 0.9450883 1.742268886 0.061810155 0.121269243 0.228200883 3183 138 61 3425 3L:18397793-18397941 7 rpr FBtr0075120|FBtr0075120|FBtr0075120 18397533|18397533|18397533 18398037|18398037|18398037 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 18397795 18397940 3'utr rpr FlyBase G28597.1 CAGTCACCACTCATCAGCCGACGGCACTCGATTTCTACTGCAGTCAAGGACACAGAGCCACAACACCCACCCAATTTTAGTTTACTCATCAAAGCGATTGTGATAATGGTTTTGTTTCTACAAAAAAGCGGAGGAAAAATTTGAAA 2243 18397843 0.98718596 30 2117 18575 0.944877345 1.891829385 0.062626263 0.380294249 0.598845599 2243 150 41 3274 3L:18397795-18397940 7 2669.5 1637 FBgn0011706 109.3166667 15.44666667 23.89666667 24.41988108 172.8204575 111.7101409 1 1 1 0.2 dme-miR-252-5p 7mer-m8 GTACTTA 3L 1851142 1851148 - 3L_1851142_1851148_- 0.58823525 0.588299001 0.588267125 4.51E-05 CNMa FBtr0332672|FBtr0303155 1850913|1850913 1851347|1851347 3L - 1851041 1851159 3'utr CNMa FlyBase G33542.1 ACGATTACATTGTACTTATACATAATGTCTCGACTTACACACACTGACACACATCTGATACCCGCTCTCTGCACACCGACATTCACACACACGCACACACCGAAGTATTTCCATATTAG 28 1851149 0.872215485 9 26 176 0.939393939 1.491361694 0.333333333 0.178571429 0.303030303 28 2 0 31 3L:1851041-1851159 7 CNMa FBtr0332672|FBtr0303155 1850913|1850913 1851347|1851347 GTACTTA 7mer-m8 dme-miR-252-5p 3L - 1851082 1851157 3'utr CNMa FlyBase G25365.1 GATTACATTGTACTTATACATAATGTCTCGACTTACACACACTGACACACATCTGATACCCGCTCTCTGCACACCG 15 1851149 0.777190814 7 14 84 0.958333333 1.361727836 0.333333333 0.4 0.625 15 1 0 23 3L:1851082-1851157 7 7 1638 FBgn0035282 2.666666667 0.21 0.333333333 2.625 33.33333333 21 1 1 1 0.2 dme-miR-317-5p 7mer-A1 TATCCCA 3L 1858304 1858310 + 3L_1858304_1858310_+ 0.822178571 0.82334036 0.822759466 0.000821517 CG12024 FBtr0072833|FBtr0303152|FBtr0072832 1858183|1858183|1858183 1859047|1859047|1859047 3L + 1858187 1858359 3'utr CG12024 FlyBase G27237.1 CGGATCGTTTTGTTATCTAATCTCAACGGCCATAACGTGACGATCACGTGCGCTAGTAATCTCCCCAGTTCCCCAGTCCAAAGTAATCTCCGGGCAAGAACGAAATCTGAAATCTCCTATCCCAATCTCGACACAAAGATGCGATGGTATTACCCTAGTTTTAACCTTAAGTG 74 1858293 0.840945916 19 68 381 0.925925926 1.875061263 0.135802469 0.094594595 0.172839506 74 6 0 75 3L:1858187-1858359 7 CG12024 FBtr0072832|FBtr0303152|FBtr0072833 1858183|1858183|1858183 1859047|1859047|1859047 TATCCCA 7mer-A1 dme-miR-317-5p 3L + 1858246 1858353 3'utr CG12024 FlyBase G20616.1 TCTCCCCAGTTCCCCAGTCCAAAGTAATCTCCGGGCAAGAACGAAATCTGAAATCTCCTATCCCAATCTCGACACAAAGATGCGATGGTATTACCCTAGTTTTAACCT 37 1858294 0.970700306 8 30 178 0.849056604 1.176091259 0.20754717 0.351351351 0.547169811 37 6 2 45 3L:1858246-1858353 7 23 1639 FBgn0035283 210.8633333 14.46 22.18 0.109075388 1.590594744 1.036970243 11 10 10.5 0.2 dme-bantam-3p 8mer-A1 TGATCTCA 3L 1859248 1859255 - 3L_1859248_1859255_- 0.631012306 0.631085855 0.631049081 5.20E-05 R FBtr0332671|FBtr0303154|FBtr0072867 1859113|1859113|1859113 1860656|1860656|1860656 3L - 1859212 1859266 3'utr R FlyBase G33545.1 CACAGAGCCTCTGATCTCAGAATCCTGGCAGTCCCGAATTCGCGACGCAGTAGGT 76 1859256 0.708962651 6 70 276 0.867924528 1.361727836 0.08490566 0.263157895 0.471698113 76 11 3 92 3L:1859212-1859266 8 R FBtr0332671|FBtr0072867|FBtr0303154 1859113|1859113|1859113 1860656|1860656|1860656 TGATCTCA 8mer-A1 dme-bantam-3p 3L - 1859212 1859267 3'utr R FlyBase G25367.1 ACACAGAGCCTCTGATCTCAGAATCCTGGCAGTCCCGAATTCGCGACGCAGTAGGT 55 1859255 0.727588916 5 47 201 0.875 1.243038049 0.05 0.309090909 0.525 55 7 3 70 3L:1859212-1859267 8 47 1640 FBgn0004636 4610.196667 206.99 319.1866667 0.010194793 0.227064109 0.147249259 1 0 0.5 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 3L 1867575 1867580 + 3L_1867575_1867580_+ 0.99999925 0.999999609 0.99999943 2.12E-07 CG12025 FBtr0345381|FBtr0072834|FBtr0332668 1867491|1867491|1867491 1869491|1867863|1868644 3L + 1867491 1867609 stop_codon CG12025 FlyBase G27247.1 AAGCGTAAGCGGACATCTGGACAGTCGAGCTGGTTGATCCATGGACGAAGAGAGTGGGAGAAGCCCCATCTATAAATATAAATCTGTGTTTGTTTATACCCGACCCGTATAAACAACTT 34 1867573 0.989900228 8 29 283 0.88372093 1.579783597 0.186046512 0.205882353 0.372093023 34 5 0 38 3L:1867491-1867609 6 CG12025 FBtr0332668|FBtr0072834|FBtr0345381 1867491|1867491|1867491 1868644|1867863|1869491 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 1867562 1867590 3'utr CG12025 FlyBase G20624.1 ATAAATATAAATCTGTGTTTGTTTATACC 11 1867574 0.746220819 3 6 102 0.611111111 0.740362689 0 0.545454545 0.722222222 11 6 1 11 3L:1867562-1867590 6 15.5 1641 FBgn0035285 812.7766667 48.59666667 74.35333333 0.019070429 0.318951917 0.20846409 2 1 1.5 0.2 dme-miR-307a-3p 6mer3-8 GGTTGT 3L 1868455 1868460 + 3L_1868455_1868460_+ 0.908793565 0.894170017 0.901481791 0.010340447 CG12025 FBtr0345381|FBtr0332668 1867491|1867491 1869491|1868644 3L + 1868421 1868471 3'utr CG12025 FlyBase G27251.1 GTATAATTTCATTTTAAGAATGAATGCTGAATATGGTTGTATTAAAACGAA 17 1868455 0.98784666 5 15 135 0.923076923 1.079181246 0.076923077 0.411764706 0.615384615 17 1 1 24 3L:1868421-1868471 6 CG12025 FBtr0332668|FBtr0345381 1867491|1867491 1868644|1869491 GGTTGT 6mer3-8 dme-miR-307a-3p 3L + 1868399 1868471 3'utr CG12025 FlyBase G20627.1 CAGCCGCTTAGTTGTTAATGTCGTATAATTTCATTTTAAGAATGAATGCTGAATATGGTTGTATTAAAACGAA 16 1868454 0.984657832 7 16 128 1 1.414973348 0.038461538 0.4375 0.653846154 16 0 0 26 3L:1868399-1868471 6 14 1642 FBgn0035285 812.7766667 48.59666667 74.35333333 0.017224904 0.288085603 0.188290146 0 1 0.5 0.2 dme-miR-317-3p 7mer-A1 GTGTTCA 3L 18752045 18752051 - 3L_18752045_18752051_- 0.823248629 0.823345014 0.823296822 6.82E-05 ftz-f1 FBtr0304627|FBtr0347045|FBtr0075086|FBtr0075087 18750605|18750605|18751747|18751747 18752745|18752745|18752745|18752745 3L - 18752021 18752092 3'utr ftz-f1 FlyBase G37897.2 GGAAAATCCATACAAAGAAAATGAAAACAAAGCAAATTTAGGTGTTCATGGTATGAATGTATGTGTATATTA 21 18752044 0.982275511 7 19 157 0.956521739 1.342422681 0.130434783 0.095238095 0.173913043 21 1 0 22 3L:18752021-18752092 7 ftz-f1 FBtr0075086|FBtr0075087|FBtr0304627|FBtr0347045 18751747|18751747|18750605|18750605 18752745|18752745|18752745|18752745 GTGTTCA 7mer-A1 dme-miR-317-3p 3L - 18752034 18752067 3'utr ftz-f1 FlyBase G28634.1 AACAAAGCAAATTTAGGTGTTCATGGTATGAATG 11 18752055 0.847236164 3 11 79 1 1.176091259 0 0.272727273 0.466666667 11 0 0 15 3L:18752034-18752067 7 14 1643 FBgn0001078 1154.326667 23.85 36.73 0.012128283 0.587002096 0.381159815 -7 4 -1.5 0.2 dme-miR-2b-2-5p 7mer-m8 TTGAAGA 3L 18752169 18752175 - 3L_18752169_18752175_- 0.626545539 0.616879644 0.621712592 0.006834823 ftz-f1 FBtr0304627|FBtr0347045|FBtr0075086|FBtr0075087 18750605|18750605|18751747|18751747 18752745|18752745|18752745|18752745 3L - 18752114 18752190 3'utr ftz-f1 FlyBase G37898.1 TAGTATCGTTCCCACTTGAAGATCGATTCTTGTATTTTTTTGCGCCAAGTGTCTTGCATAGTATTTGCGTCTAATCT 17 18752175 0.782322564 8 16 134 0.954545455 1.322219295 0.181818182 0.294117647 0.454545455 17 1 0 21 3L:18752114-18752190 7 ftz-f1 FBtr0075086|FBtr0075087|FBtr0304627|FBtr0347045 18751747|18751747|18750605|18750605 18752745|18752745|18752745|18752745 TTGAAGA 7mer-m8 dme-miR-2b-2-5p 3L - 18752155 18752189 3'utr ftz-f1 FlyBase G28635.1 AGTATCGTTCCCACTTGAAGATCGATTCTTGTATT 5 18752175 0.781863273 3 5 38 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3L:18752155-18752189 7 8.5 1644 FBgn0001078 1154.326667 23.85 36.73 0.0073636 0.35639413 0.231418459 0 0 0 0.2 dme-miR-33-5p 8mer-A1 CAATGCAA 3L 18802382 18802389 - 3L_18802382_18802389_- 0.509365492 0.352753265 0.431059379 0.110741549 CG14073 FBtr0075084|FBtr0332801 18802263|18802263 18802781|18802781 3L - 18802370 18802462 3'utr CG14073 FlyBase G37921.1 TAGAGCGAGAATATTGAGAAAATCTGGAATCTTTAGGGATTGGCTGCAATTATGCAATAAAAGTAGAAGAAAACAATGCAAGGCAGTTAGAAA 14 18802386 0.972726043 6 10 56 0.733333333 1.041392685 0.133333333 0.071428571 0.133333333 14 4 0 11 3L:18802370-18802462 8 CG14073 FBtr0332801|FBtr0075084 18802263|18802263 18802781|18802781 CAATGCAA 8mer-A1 dme-miR-33-5p 3L - 18802362 18802480 3'utr CG14073 FlyBase G28659.1 GGAAATGAATGGAAATTTTAGAGCGAGAATATTGAGAAAATCTGGAATCTTTAGGGATTGGCTGCAATTATGCAATAAAAGTAGAAGAAAACAATGCAAGGCAGTTAGAAACGAGGAAA 13 18802413 0.958140984 8 13 63 1 1.301029996 0.25 0.384615385 0.6 13 0 0 20 3L:18802362-18802480 8 5.5 1645 FBgn0036814 1280.663333 19.88666667 30.67333333 0.004294649 0.276567214 0.179308846 -3 24 10.5 0.2 dme-miR-184-5p 6mer3-8 TGATAA 3L 188028 188033 - 3L_188028_188033_- 0.997322516 0.999980552 0.998651534 0.001879561 rno FBtr0305549|FBtr0305548|FBtr0072532 187205|187984|187205 188548|188548|188548 3L - 188016 188057 3'utr rno FlyBase G32807.1 CGCCTCCTACTCACTAAGCATGATTGATAAACCCCAGCATAT 11 188035 0.95299921 6 9 40 0.882352941 1.176091259 0.176470588 0.272727273 0.529411765 11 2 0 15 3L:188016-188057 6 rno FBtr0072532|FBtr0305549|FBtr0305548 187205|187205|187984 188548|188548|188548 TGATAA 6mer3-8 dme-miR-184-5p 3L - 188029 188118 3'utr rno FlyBase G24810.1 AAATCCAAAAATGCTCTCGGTTTAGGTTTATAAAGTTTCCATTCACCTAAAAATCCTTCCACGCCTCCTACTCACTAAGCATGATTGATA 11 188057 0.987698241 9 11 95 1 1.146128036 0.071428571 0.272727273 0.428571429 11 0 0 14 3L:188029-188118 4 5 1646 FBgn0035106 2909.993333 29.82333333 45.86333333 0.001718217 0.167653962 0.109019551 2 24 13 0.2 dme-miR-304-5p 6mer2-7 GAGATT 3L 18822126 18822131 + 3L_18822126_18822131_+ 0.972374131 0.986899732 0.979636931 0.01027115 HipHop FBtr0075056|FBtr0075057 18821971|18821971 18822353|18822353 3L + 18822069 18822134 3'utr HipHop FlyBase G31237.1 TAAAGAAAGACAGAGATGTTAGCTTGGCAGGAGCCACAGAAAGATAGCCGCCATTTGGAGATTTCC 7 18822124 0.958206453 4 7 35 1 0.954242509 0.222222222 0.142857143 0.333333333 7 0 0 9 3L:18822069-18822134 6 HipHop FBtr0075056|FBtr0075057 18821971|18821971 18822353|18822353 GAGATT 6mer2-7 dme-miR-304-5p 3L + 18822076 18822134 3'utr HipHop FlyBase G23632.1 AGACAGAGATGTTAGCTTGGCAGGAGCCACAGAAAGATAGCCGCCATTTGGAGATTTCC 8 18822123 0.821962176 6 8 35 1 1.176091259 0.266666667 0.625 0.8 8 0 0 15 3L:18822076-18822134 6 4 1647 FBgn0036815 593.3433333 65.71333333 100.9466667 0.006741459 0.060870447 0.039624884 2 3 2.5 0.2 dme-miR-14-3p 7mer-A1 AGACTGA 3L 18828832 18828838 - 3L_18828832_18828838_- 0.808698418 0.821955295 0.815326857 0.009374044 Indy FBtr0075083|FBtr0075082|FBtr0301857|FBtr0075081 18828630|18828630|18828630|18828630 18829222|18829222|18829222|18829222 3L - 18828819 18828936 3'utr Indy FlyBase G37950.1 ACTTAATTGTTGCATTTAGCATAAAAATGGAAAAGATTTGGAAAAGTTAGAACAGTTTGTTCAATGGCAGCCCTGGCCTGCTAATATTTTAAATAACTAGACTGAGAGAACTTACATA 32 18828839 0.9035187 12 32 185 1 1.591064607 0.051282051 0.1875 0.333333333 32 0 0 39 3L:18828819-18828936 7 Indy FBtr0075083|FBtr0075082|FBtr0301857|FBtr0075081 18828630|18828630|18828630|18828630 18829222|18829222|18829222|18829222 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 18828796 18828892 3'utr Indy FlyBase G28680.1 AGTTAGAACAGTTTGTTCAATGGCAGCCCTGGCCTGCTAATATTTTAAATAACTAGACTGAGAGAACTTACATATTCATACATGTTTTTCAACTTGT 22 18828840 0.972444983 8 19 127 0.891891892 1.217483944 0.108108108 0.409090909 0.648648649 22 3 1 33 3L:18828796-18828892 7 17.5 1648 FBgn0036816 1686.326667 80.33666667 123.0166667 0.010377586 0.217833285 0.142257147 1 2 1.5 0.2 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 188454 188459 - 3L_188454_188459_- 0.696871775 0.422233172 0.559552474 0.194198816 rno FBtr0305549|FBtr0305548|FBtr0072532 187205|187984|187205 188548|188548|188548 3L - 188440 188505 3'utr rno FlyBase G32810.1 ACTTCGTTCATTCAAGCTTTCGATAATCCCCTCCCTTTGTGATTTGGTTCCTTGCCCTCGCCCCTA 66 188462 0.616170575 12 63 616 0.960526316 1.562292864 0.105263158 0.121212121 0.236842105 66 2 1 73 3L:188440-188505 6 rno FBtr0072532|FBtr0305549|FBtr0305548 187205|187205|187984 188548|188548|188548 GTTCCT 6mer2-7 dme-miR-276a-3p 3L - 188445 188496 3'utr rno FlyBase G24812.1 ATTCAAGCTTTCGATAATCCCCTCCCTTTGTGATTTGGTTCCTTGCCCTCGC 40 188469 0.796783624 8 37 363 0.915254237 1.033423755 0.016949153 0.375 0.576271186 40 1 4 54 3L:188445-188496 6 34.5 1649 FBgn0035106 2909.993333 29.82333333 45.86333333 0.011855697 1.156812339 0.752234901 3 10 6.5 0.2 dme-miR-932-5p 6mer2-7 GAATTG 3L 18877959 18877964 + 3L_18877959_18877964_+ 0.997423382 0.997652748 0.997538065 0.00016214 Ugt FBtr0075064 18877778 18878245 3L + 18877936 18877972 3'utr Ugt FlyBase G31284.1 AAGAAAACAGCTCACTAAAGTCTGAATTGTGTTTTGT 16 18877950 0.834634529 5 16 101 1 1.301029996 0.35 0.25 0.4 16 0 0 20 3L:18877936-18877972 6 Ugt FBtr0075064 18877778 18878245 GAATTG 6mer2-7 dme-miR-932-5p 3L + 18877933 18877965 3'utr Ugt FlyBase G23659.1 AAAAAGAAAACAGCTCACTAAAGTCTGAATTGT 7 18877951 0.965115805 4 7 35 1 1 0.4 0.285714286 0.5 7 0 0 10 3L:18877933-18877965 6 11.5 1650 FBgn0014075 2195.993333 49.69 76.23666667 0.00523681 0.231434896 0.15084605 9 8 8.5 0.2 dme-miR-980-3p 6mer3-8 GGCAGC 3L 18878829 18878834 - 3L_18878829_18878834_- 0.996165673 0.995803722 0.995984698 0.000255973 CG3961 FBtr0333712|FBtr0302322|FBtr0075078|FBtr0075077 18878248|18878651|18878248|18878248 18879086|18879086|18879086|18879086 3L - 18878775 18879064 3'utr CG3961 FlyBase G37968.1 AGACATCAACAACGAATCGAACTCAAGAAACTGGGAAGCATTCATTCAAATATGCCTATACCATTTTAAACTGATGATAACAAAGACTACAGATACAGATACGAAAGCGAACTGTCTAATTTTGTAGTATCGTCAATTCTTAGCACGTAAGAGGAGCGCAAGATACACCAGATACAGATACAATACACATAAAATATACACAACTTCAAACTGACAAGGAGAATCCTTTTGGCAGCCGCATTTTTTTATATAATTTAACCGAGAAGCGAACCTTAATTAATATATTAACT 233 18878835 0.966440359 39 217 1163 0.931899642 1.373580663 0.193548387 0.175965665 0.311827957 233 9 10 260 3L:18878775-18879064 6 CG3961 FBtr0075078|FBtr0075077|FBtr0333712|FBtr0302322 18878248|18878248|18878248|18878651 18879086|18879086|18879086|18879086 GGCAGC 6mer3-8 dme-miR-980-3p 3L - 18878821 18878874 3'utr CG3961 FlyBase G28697.1 AAAATATACACAACTTCAAACTGACAAGGAGAATCCTTTTGGCAGCCGCATTTT 54 18878836 0.712718692 8 51 259 0.941176471 1.204119983 0.258823529 0.425925926 0.635294118 54 1 4 80 3L:18878821-18878874 6 58.5 1651 FBgn0036821 610.73 21.53333333 32.27333333 0.095787009 2.716718266 1.812642016 1 2 1.5 0.2 dme-miR-1008-3p 7mer-A1 GCTGTGA 3L 18900769 18900775 - 3L_18900769_18900775_- 0.798699111 0.797827805 0.798263458 0.000616102 arx FBtr0075075 18900593 18900900 3L - 18900766 18900789 3'utr arx FlyBase G37998.1 TAAAATTAACATGTGCTGTGAAAC 8 18900778 0.723892102 2 7 43 0.833333333 1 0 0.375 0.583333333 8 2 0 10 3L:18900766-18900789 7 arx FBtr0075075 18900593 18900900 GCTGTGA 7mer-A1 dme-miR-1008-3p 3L - 18900764 18900788 3'utr arx FlyBase G28727.1 AAAATTAACATGTGCTGTGAAACAA 7 18900779 0.703538993 3 7 35 1 1.079181246 0 0.571428571 0.75 7 0 0 12 3L:18900764-18900788 7 7.5 1652 FBgn0036826 465.3333333 66.11666667 101.5966667 0.016117479 0.113435846 0.07382132 3 4 3.5 0.2 dme-miR-34-5p 8mer-A1 CACTGCCA 3L 18900869 18900876 - 3L_18900869_18900876_- 0.568542505 0.615681334 0.59211192 0.033332165 arx FBtr0075075 18900593 18900900 3L - 18900848 18900890 3'utr arx FlyBase G37999.1 TCAAGAATTACTCCCACTGCCAAAGAACAAAAACCAAAACATT 68 18900873 0.934896065 4 62 176 0.91025641 1.550228353 0.051282051 0.132352941 0.243589744 68 6 1 71 3L:18900848-18900890 8 arx FBtr0075075 18900593 18900900 CACTGCCA 8mer-A1 dme-miR-34-5p 3L - 18900849 18900888 3'utr arx FlyBase G28728.1 AAGAATTACTCCCACTGCCAAAGAACAAAAACCAAAACAT 73 18900873 0.915534299 4 73 175 1 2.021189299 0.057142857 0.356164384 0.552380952 73 0 0 105 3L:18900849-18900888 8 70.5 1653 FBgn0036826 465.3333333 66.11666667 101.5966667 0.151504298 1.06629695 0.693920404 -3 -3 -3 0.2 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 19003843 19003850 - 3L_19003843_19003850_- 0.641564075 0.642943429 0.642253752 0.000975312 nkd FBtr0075039|FBtr0332649|FBtr0332650 19003739|19003739|19003739 19004922|19005670|19004922 3L - 19003826 19003886 3'utr nkd FlyBase G38038.1 AAAAACAAAATGCATTTAACTCTTATTTACATAAAAAAGACTGATTTCCAATTAAACAATA 12 19003842 0.972362984 7 12 66 1 1.204119983 0 0.25 0.4375 12 0 0 16 3L:19003826-19003886 8 nkd FBtr0332649|FBtr0332650|FBtr0075039 19003739|19003739|19003739 19005670|19004922|19004922 AAGACTGA 8mer-A1 dme-miR-14-3p 3L - 19003827 19003869 3'utr nkd FlyBase G28758.1 AACTCTTATTTACATAAAAAAGACTGATTTCCAATTAAACAAT 11 19003842 0.583894125 4 9 64 0.904761905 1.278753601 0.047619048 0.545454545 0.761904762 11 2 0 19 3L:19003827-19003869 8 9.5 1654 FBgn0002945 3.333333333 0.083333333 0.136666667 2.85 114 69.51219512 -8 -8 -8 0.2 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 19059690 19059697 - 3L_19059690_19059697_- 0.638972297 0.641732855 0.640352576 0.001952039 CG3797 FBtr0332648 19059398 19060274 3L - 19059676 19059733 3'utr CG3797 FlyBase G38042.1 TTTACAGCTATTTCATTCAATTAATATTTCAATTCAAAGACTGACAACACCTTTCGTA 19 19059701 0.694787016 7 14 130 0.739130435 0.62838893 0 0.210526316 0.347826087 19 3 3 17 3L:19059676-19059733 8 CG3797 FBtr0332648 19059398 19060274 AAGACTGA 8mer-A1 dme-miR-14-3p 3L - 19059671 19059711 3'utr CG3797 FlyBase G28761.1 AATATTTCAATTCAAAGACTGACAACACCTTTCGTATGTTT 23 19059702 0.690026992 5 17 126 0.771428571 0.954242509 0 0.260869565 0.514285714 23 6 2 27 3L:19059671-19059711 8 19.5 1655 FBgn0036842 550.5966667 23.31333333 35.34666667 0.035416124 0.836431227 0.551678612 4 5 4.5 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3L 19059924 19059930 - 3L_19059924_19059930_- 0.491795089 0.392750354 0.442272721 0.070035179 CG3797 FBtr0332648|FBtr0075037 19059398|19059770 19060274|19060274 3L - 19059887 19060009 3'utr CG3797 FlyBase G38044.1 CGCATCTATAATCCGTGTCACAAAATCGATCCACCATGCCTATATAAACCTATACATAAAAATATCGTCTAGTGTTAAGTGTGATTTTTTGTTAATACATGTGGTTTTATATTTCGATAAGTT 37 19059924 0.990410344 14 36 366 0.962264151 1.230448921 0.075471698 0.27027027 0.490566038 37 0 2 51 3L:19059887-19060009 7 CG3797 FBtr0332648|FBtr0075037 19059398|19059770 19060274|19060274 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 19059841 19059968 3'utr CG3797 FlyBase G28763.1 ATATAAACCTATACATAAAAATATCGTCTAGTGTTAAGTGTGATTTTTTGTTAATACATGTGGTTTTATATTTCGATAAGTTTTAAAATTTATAAATTGTATATATCTTGAATATTTGTATTGTGTGT 24 19059924 0.990618135 13 24 247 1 1.591064607 0.179487179 0.5 0.692307692 24 0 0 39 3L:19059841-19059968 7 18.5 1656 FBgn0036842 550.5966667 23.31333333 35.34666667 0.033599913 0.793537318 0.523387401 -6 -6 -6 0.2 dme-miR-1006-3p 6mer3-8 CGAATT 3L 19094676 19094681 + 3L_19094676_19094681_+ 0.917620285 0.945203138 0.931411712 0.019503985 MESR6 FBtr0075026|FBtr0330090 19094563|19094563 19094760|19094760 3L + 19094620 19094701 3'utr MESR6 FlyBase G31317.1 TACAAAACTCGTTTGGGCGGGAAAACTCCACGACTAAAAGATACCCGTAGTGATTTCGAATTAGAACCTAATGATGGAAAAT 57 19094674 0.77105135 7 55 303 0.955882353 1.335792102 0.294117647 0.157894737 0.294117647 57 1 2 65 3L:19094620-19094701 6 MESR6 FBtr0330090|FBtr0075026 19094563|19094563 19094760|19094760 CGAATT 6mer3-8 dme-miR-1006-3p 3L + 19094594 19094703 3'utr MESR6 FlyBase G23682.1 CGCCACTGCGAATTAGATTCTGAATTTACAAAACTCGTTTGGGCGGGAAAACTCCACGACTAAAAGATACCCGTAGTGATTTCGAATTAGAACCTAATGATGGAAAATCC 34 19094674 0.97297931 10 32 187 0.93877551 1.662757832 0.326530612 0.352941176 0.551020408 34 3 0 46 3L:19094594-19094703 6 31.5 1657 FBgn0036846 174.09 12.22333333 18.78 0.180940893 2.577038451 1.677316294 2 2 2 0.2 dme-bantam-3p 6mer3-8 TGATCT 3L 19095299 19095304 - 3L_19095299_19095304_- 0.710015545 0.711753312 0.710884428 0.00122881 CG11577 FBtr0075034 19094888 19095476 3L - 19095099 19095363 3'utr CG11577 FlyBase G38068.1 TAGTTTTTGAATGAACTCAAGCATTGACAAACTAAATGTAGTAGTTACTTAAATTCCAATGATCTTACTTTTTTTCGAAATGGAAATCATTTTAAGTTTTACCACCTATAGAACAAAGCGAAAAGTGTTTAATTAGCTTAAGTGAACTCACTATGTCTCTCAAGCTAATCTGTATAACTTCCACAACGACTGAGCCACAGAATGCTACTGAAAGTTTCGCCTGGGGCCATTGGCTTATTGATTTCGGCCACGAATTGGGGTCGAC 528 19095304 0.859162995 47 498 4850 0.951441578 1.952169501 0.059180577 0.181818182 0.344461305 528 26 6 627 3L:19095099-19095363 6 CG11577 FBtr0075034 19094888 19095476 TGATCT 6mer3-8 dme-bantam-3p 3L - 19095100 19095369 3'utr CG11577 FlyBase G28778.1 AAATTTTAGTTTTTGAATGAACTCAAGCATTGACAAACTAAATGTAGTAGTTACTTAAATTCCAATGATCTTACTTTTTTTCGAAATGGAAATCATTTTAAGTTTTACCACCTATAGAACAAAGCGAAAAGTGTTTAATTAGCTTAAGTGAACTCACTATGTCTCTCAAGCTAATCTGTATAACTTCCACAACGACTGAGCCACAGAATGCTACTGAAAGTTTCGCCTGGGGCCATTGGCTTATTGATTTCGGCCACGAATTGGGGTCGA 365 19095304 0.943204234 44 339 3358 0.931558935 2.088136089 0.034220532 0.320547945 0.52851711 365 33 3 490 3L:19095100-19095369 6 298 1658 FBgn0036847 488.3333333 44.84333333 68.4 0.610238908 6.645357913 4.356725146 0 0 0 0.2 dme-miR-999-3p 6mer2-7 GTTAAC 3L 19099421 19099426 - 3L_19099421_19099426_- 0.99869112 0.999810833 0.999250977 0.000791747 Gem2 FBtr0330093|FBtr0075032 19099121|19099121 19099480|19099480 3L - 19099390 19099452 3'utr Gem2 FlyBase G38079.1 AATTTAAGCGCAAATTCGACTATTTTGTTAACTAAAAAGCCAAAAGCTACGCTGGTAATTTTG 14 19099427 0.980144609 8 13 96 0.941176471 0.903089987 0.058823529 0.214285714 0.352941176 14 0 1 16 3L:19099390-19099452 6 Gem2 FBtr0330093|FBtr0075032 19099121|19099121 19099480|19099480 GTTAAC 6mer2-7 dme-miR-999-3p 3L - 19099390 19099447 3'utr Gem2 FlyBase G28787.1 AAGCGCAAATTCGACTATTTTGTTAACTAAAAAGCCAAAAGCTACGCTGGTAATTTTG 14 19099427 0.689386233 8 14 96 1 1.301029996 0.1 0.428571429 0.6 14 0 0 20 3L:19099390-19099447 6 10 1659 FBgn0036850 154 17.00333333 26.24666667 0.064935065 0.588119976 0.381000762 1 1 1 0.2 dme-miR-283-5p 6mer3-8 TGATAT 3L 19257484 19257489 - 3L_19257484_19257489_- 0.985697068 0.99800319 0.991850129 0.008701727 nes FBtr0075021|FBtr0075019 19257410|19257280 19258010|19258010 3L - 19257475 19257584 3'utr nes FlyBase G38091.1 ATTTCATTTATTGAAAGGGGAGCAGCGCTCAAGGAGACTAACTAAGCCATAAAGACAGTTTTATACCAATGTAAAGATGATGCGACGATATATTTTGATATGCTCACGCT 39 19257494 0.988591338 13 29 270 0.745098039 1.579783597 0.137254902 0.282051282 0.450980392 39 13 0 38 3L:19257475-19257584 6 nes FBtr0075021|FBtr0075019 19257410|19257280 19258010|19258010 TGATAT 6mer3-8 dme-miR-283-5p 3L - 19257475 19257613 3'utr nes FlyBase G28798.1 ACACCAGGGTCTTTGAAAATCAAACTCAAATTTCATTTATTGAAAGGGGAGCAGCGCTCAAGGAGACTAACTAAGCCATAAAGACAGTTTTATACCAATGTAAAGATGATGCGACGATATATTTTGATATGCTCACGCT 33 19257493 0.986122897 13 29 241 0.906976744 1.591064607 0.186046512 0.242424242 0.418604651 33 4 0 39 3L:19257475-19257613 6 21.5 1660 FBgn0026630 1182.346667 63.70333333 97.51666667 0.018184176 0.337501962 0.220475132 5 4 4.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3L 19257803 19257809 - 3L_19257803_19257809_- 0.823317925 0.823346017 0.823331971 1.99E-05 nes FBtr0075021|FBtr0075019 19257410|19257280 19258010|19258010 3L - 19257609 19257837 3'utr nes FlyBase G38092.1 ACTTTGAACATATATATATATTGTCTGCCTAGTCAAGGTGGAGTCATCCCCTAGTATGCAGTGTGGATTTTGGCGATAAGATATTGTTTTATCTTGCCTAAGAACACATTCTCAGTCGTATATATATATATATATATAAACATTATGGAATTGTAAATTGTATAAGAGTATAAACCCGTTGAGTTCATCTAGGAACTAGACAGATCACTCGAGACTATAACGATACACC 58 19257814 0.906058157 26 52 435 0.910447761 1.785329835 0.074626866 0.120689655 0.23880597 58 6 0 61 3L:19257609-19257837 7 nes FBtr0075021|FBtr0075019 19257410|19257280 19258010|19258010 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L - 19257761 19257826 3'utr nes FlyBase G28800.1 ATATATATATTGTCTGCCTAGTCAAGGTGGAGTCATCCCCTAGTATGCAGTGTGGATTTTGGCGAT 14 19257813 0.979150593 6 13 94 1 1.278753601 0.315789474 0.214285714 0.421052632 14 0 0 19 3L:19257761-19257826 7 19.5 1661 FBgn0026630 1182.346667 63.70333333 97.51666667 0.016492625 0.306106431 0.199965818 5 4 4.5 0.2 dme-miR-1008-3p 6mer3-8 AGCTGT 3L 19262646 19262651 - 3L_19262646_19262651_- 0.9998736 0.99998155 0.999927575 7.64E-05 Max FBtr0345391|FBtr0075018 19262230|19262524 19262875|19262875 3L - 19262542 19262672 3'utr Max FlyBase G38104.1 CCGATAATCATAATCATCATTAGCTGTAAGCCCAAAATGTAACCCACCCAATCGACCTTAATTTGTATGCGTGCGTCTTTTCTACTTTCAACAAATTGTCACTCTGTGCGCAAAGAATAAAGTAAACTAGT 33 19262653 0.976903271 16 29 215 0.925 1.267171728 0.125 0.181818182 0.325 33 2 1 37 3L:19262542-19262672 6 Max FBtr0345391|FBtr0075018 19262230|19262524 19262875|19262875 AGCTGT 6mer3-8 dme-miR-1008-3p 3L - 19262613 19262672 3'utr Max FlyBase G28808.1 CCGATAATCATAATCATCATTAGCTGTAAGCCCAAAATGTAACCCACCCAATCGACCTTA 13 19262662 0.985424886 3 9 62 0.727272727 0.726998728 0.318181818 0.692307692 0.818181818 13 4 2 16 3L:19262613-19262672 6 12 1662 FBgn0017578 482.9933333 60.31 92.42333333 0.024845063 0.198971978 0.129837343 2 11 6.5 0.2 dme-miR-305-3p 6mer3-8 ATGTGC 3L 19266809 19266814 - 3L_19266809_19266814_- 0.984093401 0.984046771 0.984070086 3.30E-05 CG9629 FBtr0075017 19266471 19266836 3L - 19266779 19266828 3'utr CG9629 FlyBase G38112.1 TACGATCAATTTTAATGTGCTACAATTTACAATACTATTACATATAATGT 14 19266813 0.785005521 2 13 125 0.941176471 1.204119983 0.058823529 0.214285714 0.352941176 14 1 0 16 3L:19266779-19266828 6 CG9629 FBtr0075017 19266471 19266836 ATGTGC 6mer3-8 dme-miR-305-3p 3L - 19266757 19266826 3'utr CG9629 FlyBase G28812.1 CGATCAATTTTAATGTGCTACAATTTACAATACTATTACATATAATGTCCAAAACTAAATGCAACTGATA 15 19266813 0.9873988 5 15 127 1 1.278753601 0.210526316 0.2 0.368421053 15 0 0 19 3L:19266757-19266826 6 11.5 1663 FBgn0036857 368.37 21.64666667 32.97666667 0.031218612 0.531259624 0.348731426 -1 -1 -1 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3L 19282573 19282579 - 3L_19282573_19282579_- 0.749327487 0.711108211 0.730217849 0.027025126 Gbs-76A FBtr0332155|FBtr0345390|FBtr0075014|FBtr0331425 19281926|19281362|19281926|19281926 19283222|19283222|19283222|19283222 3L - 19282542 19282595 3'utr Gbs-76A FlyBase G38123.1 AAGGTTCGAATGAATCCCAAAGATAGTTGTTAGTCGTATGTTATAAGAAGAGCA 43 19282581 0.952838037 10 33 345 0.755555556 1.230448921 0.355555556 0.046511628 0.088888889 43 10 1 34 3L:19282542-19282595 7 Gbs-76A FBtr0331425|FBtr0075014|FBtr0345390|FBtr0332155 19281926|19281926|19281362|19281926 19283222|19283222|19283222|19283222 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 19282525 19282599 3'utr Gbs-76A FlyBase G28818.1 CAGCAAGGTTCGAATGAATCCCAAAGATAGTTGTTAGTCGTATGTTATAAGAAGAGCAAGTGATAACAAACTAAA 23 19282581 0.98783679 5 21 186 0.80952381 1.531478917 0.30952381 0.565217391 0.761904762 23 8 0 34 3L:19282525-19282599 7 28 1664 FBgn0036862 172.6666667 4.483333333 6.786666667 0.162162162 6.24535316 4.125736739 2 2 2 0.2 dme-miR-283-5p 8mer-m1 TGATATTT 3L 19585131 19585138 - 3L_19585131_19585138_- 0.555246128 0.553674264 0.554460196 0.00111143 CG9231 FBtr0074972|FBtr0344994 19585091|19585091 19585473|19585473 3L - 19585103 19585150 3'utr CG9231 FlyBase G38172.1 ATAGATATTCAGTGATATTTGTAATGTTGTATTATCAAAAATAAAACA 17 19585143 0.98674877 8 14 145 0.85 0.753327667 0.05 0.176470588 0.3 17 1 2 17 3L:19585103-19585150 8 CG9231 FBtr0074972|FBtr0344994 19585091|19585091 19585473|19585473 TGATATTT 8mer-m1 dme-miR-283-5p 3L - 19585118 19585150 3'utr CG9231 FlyBase G28850.1 ATAGATATTCAGTGATATTTGTAATGTTGTATT 7 19585143 0.957875442 3 7 63 1 1.079181246 0 0.428571429 0.666666667 7 0 0 12 3L:19585118-19585150 8 10.5 1665 FBgn0036887 129 20.06333333 30.59 0.081395349 0.523342748 0.343249428 5 5 5 0.2 dme-miR-277-3p 6mer3-8 TGCATT 3L 19590925 19590930 - 3L_19590925_19590930_- 0.993728471 0.978948601 0.986338536 0.010450968 ash1 FBtr0306010|FBtr0306009 19590771|19590771 19591301|19591301 3L - 19590912 19590976 3'utr ash1 FlyBase G38179.1 CAAAACTATCCCCCTCTCGTCTTTGCAATTGAAGGCGTTTGACTTTTGCATTGTTATTTTAAATT 46 19590931 0.776344362 12 45 362 0.984615385 1.505149978 0.061538462 0.326086957 0.523076923 46 0 1 64 3L:19590912-19590976 6 ash1 FBtr0306010|FBtr0306009 19590771|19590771 19591301|19591301 TGCATT 6mer3-8 dme-miR-277-3p 3L - 19590911 19590975 3'utr ash1 FlyBase G28856.1 AAAACTATCCCCCTCTCGTCTTTGCAATTGAAGGCGTTTGACTTTTGCATTGTTATTTTAAATTA 35 19590931 0.738578334 7 35 283 1 1.698970004 0.08 0.285714286 0.5 35 0 0 50 3L:19590911-19590975 6 35.5 1666 FBgn0005386 720.8833333 11.4 17.44333333 0.049245139 3.114035088 2.035161475 1 1 1 0.2 dme-miR-282-5p 6mer3-8 AGAGGC 3L 19591250 19591255 - 3L_19591250_19591255_- 0.999959115 0.999037157 0.999498136 0.000651882 ash1 FBtr0306010|FBtr0306009 19590771|19590771 19591301|19591301 3L - 19591219 19591308 stop_codon ash1 FlyBase G38181.1 AACATAACCGATGTAACGCGAGTAGATTAAGCCGTGTATATACGCCTAAAGTTAGAGGCATTGATTAATATTTATGGAACTTCAATTAAC 24 19591256 0.976446475 8 24 156 1 1.447158031 0.142857143 0.166666667 0.285714286 24 0 0 28 3L:19591219-19591308 6 ash1 FBtr0306010|FBtr0306009 19590771|19590771 19591301|19591301 AGAGGC 6mer3-8 dme-miR-282-5p 3L - 19591243 19591275 3'utr ash1 FlyBase G28858.1 GTGTATATACGCCTAAAGTTAGAGGCATTGATT 12 19591256 0.78400722 5 11 82 0.909090909 1.301029996 0.181818182 0.416666667 0.681818182 12 2 0 20 3L:19591243-19591275 6 15 1667 FBgn0005386 720.8833333 11.4 17.44333333 0.020807805 1.315789474 0.859927384 1 1 1 0.2 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3L 19613357 19613364 + 3L_19613357_19613364_+ 0.585608863 0.617740091 0.601674477 0.022720189 CG9376 FBtr0074946 19613260 19613489 3L + 19613339 19613424 3'utr CG9376 FlyBase G31405.1 AACCACGTCATCATCCCGTCTAGTCAGCAGCTTAGGAACTACCAAAAAGCAATTACCACTTTAATGTTACATGTTTAATCATATTA 85 19613352 0.971182698 12 82 478 0.961538462 1.698970004 0.259615385 0.176470588 0.326923077 85 3 1 100 3L:19613339-19613424 8 CG9376 FBtr0074946 19613260 19613489 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L + 19613337 19613390 3'utr CG9376 FlyBase G23745.1 AGAACCACGTCATCATCCCGTCTAGTCAGCAGCTTAGGAACTACCAAAAAGCAA 51 19613352 0.939950201 8 46 277 0.902439024 1.568201724 0.182926829 0.450980392 0.658536585 51 7 1 74 3L:19613337-19613390 8 63 1668 FBgn0036893 103 12.34333333 18.84333333 0.611650485 5.103969754 3.343357509 5 5 5 0.2 dme-miR-79-3p 6mer3-8 TAGCTT 3L 19624535 19624540 - 3L_19624535_19624540_- 0.999762222 0.999512061 0.999637142 0.000176847 wnd FBtr0074965|FBtr0074963|FBtr0074964 19624404|19624404|19624404 19625547|19625547|19625547 3L - 19624472 19624554 3'utr wnd FlyBase G38236.1 ACTAGTTGGATGTTTAGCTTCGTAAGATGTGTCGTTCCTTTGTGGGCGACGTTTCTCTACATTATGTAAATGTACTTCATATT 10 19624541 0.987436245 7 10 88 1 1.113943352 0.076923077 0.2 0.384615385 10 0 0 13 3L:19624472-19624554 6 wnd FBtr0074964|FBtr0074965|FBtr0074963 19624404|19624404|19624404 19625547|19625547|19625547 TAGCTT 6mer3-8 dme-miR-79-3p 3L - 19624494 19624555 3'utr wnd FlyBase G28897.1 CACTAGTTGGATGTTTAGCTTCGTAAGATGTGTCGTTCCTTTGTGGGCGACGTTTCTCTACA 6 19624540 0.984860413 5 6 46 1 0.954242509 0.444444444 0.5 0.666666667 6 0 0 9 3L:19624494-19624555 6 5 1669 FBgn0036896 311 9.553333333 14.51666667 0.01607717 0.52337753 0.344431688 1 0 0.5 0.2 dme-miR-277-3p 7mer-m8 TGCATTT 3L 19625252 19625258 - 3L_19625252_19625258_- 0.611701311 0.620202367 0.615951839 0.006011185 wnd FBtr0074965|FBtr0074963|FBtr0074964 19624404|19624404|19624404 19625547|19625547|19625547 3L - 19625231 19625312 3'utr wnd FlyBase G38241.1 AAACCCTTTTGGGTTCTTTGGGGCGATCTTTGTCCGTGTCGTACTCGTATCGCATGCATTTCCTATTTTGCTAAATATAATT 23 19625258 0.989371264 11 23 235 1 1.397940009 0.2 0.086956522 0.16 23 0 0 25 3L:19625231-19625312 7 wnd FBtr0074964|FBtr0074965|FBtr0074963 19624404|19624404|19624404 19625547|19625547|19625547 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 19625236 19625312 3'utr wnd FlyBase G28901.1 AAACCCTTTTGGGTTCTTTGGGGCGATCTTTGTCCGTGTCGTACTCGTATCGCATGCATTTCCTATTTTGCTAAATA 15 19625258 0.900700155 9 15 156 1 1.431363764 0.185185185 0.533333333 0.740740741 15 0 0 27 3L:19625236-19625312 7 15 1670 FBgn0036896 311 9.553333333 14.51666667 0.048231511 1.570132589 1.033295063 0 0 0 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 19638706 19638711 - 3L_19638706_19638711_- 0.989717517 0.998504177 0.994110847 0.006213135 CG8786 FBtr0331862|FBtr0331862|FBtr0331862 19637205|19637205|19637205 19639572|19639572|19639572 3L - 19638688 19638774 5'utr CG8786 FlyBase G38261.1 CAGGGGAATCAGATGCAGTATTAATTATTAAGTCGCCGTGAAGTGCGTTAAACAAAAACATTTCTGTGACAGTTGAATATATTGATA 132 19638713 0.903648385 11 127 860 0.963414634 2.198657087 0.109756098 0.181818182 0.341463415 132 6 0 158 3L:19638688-19638774 6 CG8786 FBtr0331862|FBtr0331862|FBtr0331862 19637205|19637205|19637205 19639572|19639572|19639572 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 19638668 19638773 5'utr CG8786 FlyBase G28916.1 AGGGGAATCAGATGCAGTATTAATTATTAAGTCGCCGTGAAGTGCGTTAAACAAAAACATTTCTGTGACAGTTGAATATATTGATATTTTGTATACTCTAAGTTGC 73 19638713 0.922138269 11 70 511 0.95412844 2.017033339 0.110091743 0.328767123 0.550458716 73 5 0 104 3L:19638668-19638773 6 80 1671 FBgn0036897 334.61 15.00666667 22.97333333 0.239084307 5.330964016 3.482298317 2 2 2 0.2 dme-miR-304-5p 7mer-m8 TGAGATT 3L 19714622 19714628 - 3L_19714622_19714628_- 0.620165575 0.619557051 0.619861313 0.000430274 Trpml FBtr0074952 19714416 19715268 3L - 19714583 19714648 3'utr Trpml FlyBase G38288.1 AACTGCACTGGTCGACAAAATGAGATTTTTGGCAGTCTAAGCAAATAGTTATTTTAGAAAGTGTTT 8 19714628 0.983870499 4 6 54 0.9 0.954242509 0.1 0.25 0.4 8 1 0 9 3L:19714583-19714648 7 Trpml FBtr0074952 19714416 19715268 TGAGATT 7mer-m8 dme-miR-304-5p 3L - 19714603 19714645 3'utr Trpml FlyBase G28933.1 TGCACTGGTCGACAAAATGAGATTTTTGGCAGTCTAAGCAAAT 5 19714628 0.982196204 3 4 33 0.857142857 0.77815125 0.142857143 0.4 0.571428571 5 1 0 6 3L:19714603-19714645 7 5.5 1672 FBgn0262516 372.8066667 14.61333333 22.29666667 0.014752955 0.376368613 0.246673643 0 0 0 0.2 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3L 19720015 19720022 - 3L_19720015_19720022_- 0.584824764 0.603243945 0.594034355 0.013024271 CG42637 FBtr0302279|FBtr0302277|FBtr0302278 19719525|19719525|19719525 19720443|19720443|19720443 3L - 19719982 19720036 3'utr CG42637 FlyBase G38300.1 AGCCGAAAAAACCGTCTAGTCACAAGGTCTTCAGACTAGTTATTGTTTTATATAA 10 19720022 0.965434724 3 9 52 0.9375 0.875061263 0.5625 0.5 0.6875 10 0 1 15 3L:19719982-19720036 8 CG42637 FBtr0302278|FBtr0302277|FBtr0302279 19719525|19719525|19719525 19720443|19720443|19720443 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L - 19719992 19720036 3'utr CG42637 FlyBase G28943.1 AGCCGAAAAAACCGTCTAGTCACAAGGTCTTCAGACTAGTTATTG 11 19720022 0.937541916 4 11 43 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 3L:19719992-19720036 8 9.5 1673 FBgn0261360 1575.906667 29.86333333 45.63333333 0.006028276 0.318115861 0.208181154 0 0 0 0.2 dme-miR-304-5p 7mer-m8 TGAGATT 3L 19746038 19746044 - 3L_19746038_19746044_- 0.58239093 0.620188509 0.601289719 0.026726939 CG42638 FBtr0302283 19745832 19746684 3L - 19746023 19746063 5'utr CG42638 FlyBase G38320.1 ACTGCACTGGTCGACAAAATGAGATTTTTGGCAGTCTAAGC 8 19746044 0.957016742 2 8 61 1 0.954242509 0.111111111 0.125 0.222222222 8 0 0 9 3L:19746023-19746063 7 CG42638 FBtr0302283 19745832 19746684 TGAGATT 7mer-m8 dme-miR-304-5p 3L - 19746021 19746062 5'utr CG42638 FlyBase G28957.1 CTGCACTGGTCGACAAAATGAGATTTTTGGCAGTCTAAGCAA 8 19746036 0.830166943 3 7 51 0.9 0.954242509 0.3 0.25 0.4 8 1 0 9 3L:19746021-19746062 7 8 1674 FBgn0261361 372.8066667 14.61333333 22.29666667 0.021458844 0.547445255 0.358798027 0 -8 -4 0.2 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3L 19751431 19751438 - 3L_19751431_19751438_- 0.610058541 0.604593181 0.607325861 0.003864551 Gyc76C FBtr0333879|FBtr0302280|FBtr0302282|FBtr0302281 19750941|19750941|19750941|19750941 19751859|19751859|19751859|19751859 3L - 19751388 19751454 3'utr Gyc76C FlyBase G38332.1 GAAGCCGAAAAAACCGTCTAGTCACAAGGTCTTCAGACTAGTTATTGTTTTATATAAAATAAACACA 15 19751438 0.955641751 5 14 72 0.9375 0.875061263 0.3125 0.066666667 0.125 15 0 1 15 3L:19751388-19751454 8 Gyc76C FBtr0302282|FBtr0302281|FBtr0333879|FBtr0302280 19750941|19750941|19750941|19750941 19751859|19751859|19751859|19751859 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L - 19751401 19751455 3'utr Gyc76C FlyBase G28967.1 AGAAGCCGAAAAAACCGTCTAGTCACAAGGTCTTCAGACTAGTTATTGTTTTATA 12 19751438 0.962288132 4 11 58 0.941176471 1.204119983 0.058823529 0.25 0.470588235 12 1 0 16 3L:19751401-19751455 8 11.5 1675 FBgn0266136 1575.906667 29.86333333 45.63333333 0.007297386 0.385087621 0.252008766 0 0 0 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA 3L 19803083 19803090 + 3L_19803083_19803090_+ 0.623409992 0.621904119 0.622657055 0.001064832 Ir76a FBtr0301606 19802012 19803427 3L + 19803049 19803098 3'utr Ir76a FlyBase G31441.1 AGCGGCTGAAACTTATGGTGGATGATATTTACTTTGCATTTACGGTGGCG 10 19803082 0.753568534 4 10 77 1 1.146128036 0.714285714 0.4 0.571428571 10 0 0 14 3L:19803049-19803098 8 Ir76a FBtr0301606 19802012 19803427 TGCATTTA 8mer-A1 dme-miR-277-3p 3L + 19803041 19803099 3'utr Ir76a FlyBase G23784.1 TGCCCTAAAGCGGCTGAAACTTATGGTGGATGATATTTACTTTGCATTTACGGTGGCGT 7 19803081 0.983702874 4 6 50 1 1 0.4 0.285714286 0.5 7 0 0 10 3L:19803041-19803099 8 5 1676 FBgn0260874 218.0066667 15.19666667 23.07666667 0.022935078 0.329019522 0.216669074 1 2 1.5 0.2 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3L 19810499 19810505 - 3L_19810499_19810505_- 0.61925971 0.619130597 0.619195153 9.13E-05 Cyp305a1 FBtr0074925 19810401 19810551 3L - 19810466 19810521 3'utr Cyp305a1 FlyBase G38376.1 TATAGGTCAAGAGATATGGTGCTGAATCCACTAGGATATTTCCAAGGATTCCGAAA 97 19810505 0.962216806 8 96 501 0.991735537 1.77815125 0.074380165 0.206185567 0.363636364 97 0 1 120 3L:19810466-19810521 7 Cyp305a1 FBtr0074925 19810401 19810551 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3L - 19810465 19810536 3'utr Cyp305a1 FlyBase G28998.1 CGATGGTGTCGGTATTATAGGTCAAGAGATATGGTGCTGAATCCACTAGGATATTTCCAAGGATTCCGAAAA 69 19810505 0.966688779 6 65 351 0.96 1.681241237 0.15 0.333333333 0.54 69 3 1 96 3L:19810465-19810536 7 80 1677 FBgn0036910 2.666666667 0.18 0.286666667 30 444.4444444 279.0697674 0 0 0 0.2 dme-miR-1003-3p 7mer-A1 TGTGAGA 3L 19816446 19816452 - 3L_19816446_19816452_- 0.561654132 0.563041281 0.562347707 0.000980899 Fibp FBtr0332728 19816163 19816661 3L - 19816440 19816486 5'utr Fibp FlyBase G38390.1 CAATCGGGAGCTGCGCGATCTTTTCGTCGATCTCTGTGAGAAGCTTA 53 19816452 0.776996573 9 50 428 0.952380952 1.77815125 0.142857143 0.150943396 0.285714286 53 3 0 60 3L:19816440-19816486 7 Fibp FBtr0332728 19816163 19816661 TGTGAGA 7mer-A1 dme-miR-1003-3p 3L - 19816398 19816483 5'utr Fibp FlyBase G29003.1 TCGGGAGCTGCGCGATCTTTTCGTCGATCTCTGTGAGAAGCTTATTGATCCTTGGCGTCAGAATGGCTGGAACCGTGAGCAAGTGA 39 19816452 0.782832515 8 37 298 0.964285714 1.431363764 0.178571429 0.358974359 0.553571429 39 1 1 54 3L:19816398-19816483 7 42 1678 FBgn0036911 257 25.10333333 38.12666667 0.163424125 1.673084584 1.101591187 0 0 0 0.2 dme-miR-14-3p 6mer2-7 AGACTG 3L 19829848 19829853 + 3L_19829848_19829853_+ 0.706951799 0.995344843 0.851148321 0.203924646 Deaf1 FBtr0332153 19829189 19830686 3L + 19829804 19829872 3'utr Deaf1 FlyBase G31466.1 TCTGAAATTACCATACATATTCGTCGATGTATACACTTTTCATTAGACTGTAAGCGCATAGTTAAACTT 30 19829846 0.986658708 7 29 255 0.967741935 1.477121255 0.35483871 0.033333333 0.064516129 30 1 0 30 3L:19829804-19829872 6 Deaf1 FBtr0332153 19829189 19830686 AGACTG 6mer2-7 dme-miR-14-3p 3L + 19829833 19829865 3'utr Deaf1 FlyBase G23803.1 TATACACTTTTCATTAGACTGTAAGCGCATAGT 11 19829846 0.678610043 2 11 85 1 1.113943352 0.384615385 0.181818182 0.307692308 11 0 0 13 3L:19829833-19829865 6 19.5 1679 FBgn0013799 381.6666667 13.13 20 0.051091703 1.485148515 0.975 2 2 2 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3L 19831866 19831872 - 3L_19831866_19831872_- 0.519596892 0.519079171 0.519338031 0.000366069 trc FBtr0074922|FBtr0332154 19831389|19830862 19832075|19832075 3L - 19831841 19831935 3'utr trc FlyBase G38394.1 AAATCCCCGATTTTCCTTTTTGAATGTCTTACCTACATGTGTATTTAAATACTAGCTAACATTTGTGATTCCAAACAAGAGAAGAATATGATAAC 71 19831873 0.982442607 11 70 526 0.988636364 1.939519253 0.011363636 0.197183099 0.352272727 71 1 0 87 3L:19831841-19831935 7 trc FBtr0074922|FBtr0332154 19831389|19830862 19832075|19832075 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 19831853 19831896 3'utr trc FlyBase G29007.1 TGTATTTAAATACTAGCTAACATTTGTGATTCCAAACAAGAGAA 35 19831873 0.916829377 6 31 258 0.865384615 1.653212514 0.019230769 0.371428571 0.576923077 35 7 0 45 3L:19831853-19831896 7 48.5 1680 FBgn0003744 320.6866667 15.89666667 24.39333333 0.151237969 3.050954078 1.988248155 1 1 1 0.2 dme-miR-283-5p 8mer-A1 TGATATTA 3L 19867555 19867562 - 3L_19867555_19867562_- 0.589531313 0.585657896 0.587594604 0.002738907 Rab8 FBtr0074921 19867486 19868552 3L - 19867542 19867607 3'utr Rab8 FlyBase G38404.1 AGTAATATAAATAATGTGAAATTAAATGATAACTAATTGCATATTTGATATTAATTAATTACTTGT 16 19867563 0.776200893 8 16 139 1 1.322219295 0.047619048 0.1875 0.380952381 16 0 0 21 3L:19867542-19867607 8 Rab8 FBtr0074921 19867486 19868552 TGATATTA 8mer-A1 dme-miR-283-5p 3L - 19867548 19867628 3'utr Rab8 FlyBase G29014.1 TTATGAACACATACACAGCGCAGTAATATAAATAATGTGAAATTAAATGATAACTAATTGCATATTTGATATTAATTAATT 12 19867569 0.986614097 9 11 94 0.9375 1.176091259 0.0625 0.333333333 0.5 12 1 0 15 3L:19867548-19867628 8 4.5 1681 FBgn0262518 1251.336667 71.43666667 109.69 0.003596155 0.062992861 0.041024706 1 7 4 0.2 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 19867589 19867594 - 3L_19867589_19867594_- 0.84141934 0.803618376 0.822518858 0.026729273 Rab8 FBtr0074921 19867486 19868552 3L - 19867542 19867607 3'utr Rab8 FlyBase G38404.1 AGTAATATAAATAATGTGAAATTAAATGATAACTAATTGCATATTTGATATTAATTAATTACTTGT 16 19867596 0.776200893 8 16 139 1 1.322219295 0.047619048 0.1875 0.380952381 16 0 0 21 3L:19867542-19867607 6 Rab8 FBtr0074921 19867486 19868552 ATGTGA 6mer3-8 dme-miR-1003-3p 3L - 19867548 19867628 3'utr Rab8 FlyBase G29014.1 TTATGAACACATACACAGCGCAGTAATATAAATAATGTGAAATTAAATGATAACTAATTGCATATTTGATATTAATTAATT 12 19867595 0.986614097 9 11 94 0.9375 1.176091259 0.0625 0.333333333 0.5 12 1 0 15 3L:19867548-19867628 6 8 1682 FBgn0262518 1251.336667 71.43666667 109.69 0.006393164 0.111987308 0.072932811 2 1 1.5 0.2 dme-miR-307a-3p 6mer3-8 GGTTGT 3L 19868102 19868107 - 3L_19868102_19868107_- 0.970714654 0.923951346 0.947333 0.033066717 Rab8 FBtr0308832|FBtr0308833|FBtr0074921 19868034|19867706|19867486 19868552|19868552|19868552 3L - 19868080 19868183 3'utr Rab8 FlyBase G38408.1 AGCCAATCCAACCCGCCCGCGTCCTTCTCGAAGAGGTTTTAGTATTTACGGAATTATGATTTTCTCTAGCAGCCATGGTTGTCGATTTGTAAATTATTAATTGT 61 19868107 0.809993318 17 60 451 0.986842105 1.875061263 0.078947368 0.213114754 0.368421053 61 1 0 75 3L:19868080-19868183 6 Rab8 FBtr0308832|FBtr0308833|FBtr0074921 19868034|19867706|19867486 19868552|19868552|19868552 GGTTGT 6mer3-8 dme-miR-307a-3p 3L - 19868086 19868179 3'utr Rab8 FlyBase G29019.1 AATCCAACCCGCCCGCGTCCTTCTCGAAGAGGTTTTAGTATTTACGGAATTATGATTTTCTCTAGCAGCCATGGTTGTCGATTTGTAAATTATT 33 19868107 0.984224098 10 31 247 0.906976744 1.591064607 0.11627907 0.242424242 0.418604651 33 4 0 39 3L:19868086-19868179 6 32 1683 FBgn0262518 1251.336667 71.43666667 109.69 0.025572654 0.447949232 0.291731243 0 0 0 0.2 dme-miR-932-5p 6mer2-7 GAATTG 3L 19881258 19881263 + 3L_19881258_19881263_+ 0.920604904 0.950706341 0.935655622 0.021284904 CG8334 FBtr0332148|FBtr0332149|FBtr0332150|FBtr0332151 19881066|19881066|19881066|19881066 19881783|19881783|19881783|19881783 3L + 19881163 19881380 3'utr CG8334 FlyBase G31529.1 TTGTTATTTACTATTCTAAGCCTATTTTGATTTTCTGCAATAGTTGATTAATTATCCCCTAATTAGTTTTAGGACGAATTATTTTTCTTTGCCGAGAATTGTGTAATGCATGTAATATACAATATTCATATTTAGCTTGTAGATGATATGTTATATTGGTTGGCCAATGTGGAGCTTAGGTTGTTACGCCGAACAAATCCATTCTCAATAGTTTCTTG 42 19881252 0.987587027 19 40 368 0.980769231 1.40654018 0.326923077 0.214285714 0.365384615 42 0 1 51 3L:19881163-19881380 6 CG8334 FBtr0332150|FBtr0332151|FBtr0332148|FBtr0332149 19881066|19881066|19881066|19881066 19881783|19881783|19881783|19881783 GAATTG 6mer2-7 dme-miR-932-5p 3L + 19881214 19881282 3'utr CG8334 FlyBase G23841.1 TTATCCCCTAATTAGTTTTAGGACGAATTATTTTTCTTTGCCGAGAATTGTGTAATGCATGTAATATAC 12 19881252 0.987598913 8 11 112 0.947368421 0.954242509 0.421052632 0.333333333 0.578947368 12 0 1 18 3L:19881214-19881282 6 10.5 1684 FBgn0036913 1095.78 21.01 32.23333333 0.009582215 0.499762018 0.325749741 6 6 6 0.2 dme-miR-932-5p 6mer3-8 GGAATT 3L 19881472 19881477 + 3L_19881472_19881477_+ 0.999999132 0.999467009 0.999733071 0.000376252 CG8334 FBtr0332148|FBtr0332149|FBtr0332150|FBtr0332151 19881066|19881066|19881066|19881066 19881783|19881783|19881783|19881783 3L + 19881448 19881489 3'utr CG8334 FlyBase G31531.1 ATTATTTATGCCAGACCATGTCGTGGAATTCCATTTAATTTG 8 19881476 0.727539148 3 7 68 0.875 0.84509804 0.25 0 0 8 1 0 7 3L:19881448-19881489 6 CG8334 FBtr0332150|FBtr0332151|FBtr0332148|FBtr0332149 19881066|19881066|19881066|19881066 19881783|19881783|19881783|19881783 GGAATT 6mer3-8 dme-miR-932-5p 3L + 19881452 19881495 3'utr CG8334 FlyBase G23844.1 TTTATGCCAGACCATGTCGTGGAATTCCATTTAATTTGTAATTA 5 19881476 0.970495464 5 5 47 1 0.84509804 0.142857143 0.4 0.571428571 5 0 0 7 3L:19881452-19881495 6 6 1685 FBgn0036913 1095.78 21.01 32.23333333 0.005475552 0.285578296 0.186142709 -4 -4 -4 0.2 dme-miR-277-3p 6mer2-7 GCATTT 3L 19912425 19912430 + 3L_19912425_19912430_+ 0.977648904 0.833476594 0.905562749 0.101945211 Prp3 FBtr0074892|FBtr0074891 19912327|19912327 19912504|19912504 3L + 19912382 19912459 3'utr Prp3 FlyBase G31537.1 TCGGAAAGATACAAGTCTGAATTAAAGTTTTGAAGCGCGCTACGCATTTGATGTTATTATTTTCGAAGCTATTCGGAA 18 19912429 0.980944524 9 15 109 0.884615385 1.361727836 0.192307692 0.222222222 0.461538462 18 3 0 23 3L:19912382-19912459 6 Prp3 FBtr0074892|FBtr0074891 19912327|19912327 19912504|19912504 GCATTT 6mer2-7 dme-miR-277-3p 3L + 19912387 19912436 3'utr Prp3 FlyBase G23847.1 AAGATACAAGTCTGAATTAAAGTTTTGAAGCGCGCTACGCATTTGATGTT 9 19912429 0.990492863 4 6 60 0.777777778 1.146128036 0.555555556 0.555555556 0.777777778 9 4 0 14 3L:19912387-19912436 6 10.5 1686 FBgn0036915 320.61 18.75 28.82333333 0.03275007 0.56 0.364288192 -4 -4 -4 0.2 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3L 19918636 19918642 - 3L_19918636_19918642_- 0.677147666 0.808731458 0.742939562 0.093043797 Su(z)12 FBtr0074917|FBtr0074917|FBtr0074916|FBtr0074916 19918240|19918240|19918240|19918240 19919000|19919000|19919365|19919365 3L - 19918544 19918662 3'utr Su(z)12 FlyBase G38492.1 TTTAATTCTAATTTGGCAGTTACTTAAACTTAACAAATCTACAGGGCTAATGGAAAATCAAAATTCAAAATCGATTTGAATTCCCATGCTTACACTTCACATCCGGTTTGGATTGTGTA 24 19918650 0.98759471 11 24 205 1 1.447158031 0 0.166666667 0.285714286 24 0 0 28 3L:19918544-19918662 7 Su(z)12 FBtr0074916|FBtr0074916|FBtr0074917|FBtr0074917 19918240|19918240|19918240|19918240 19919365|19919365|19919000|19919000 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3L - 19918622 19918667 3'utr Su(z)12 FlyBase G29079.1 TATACTTTAATTCTAATTTGGCAGTTACTTAAACTTAACAAATCTA 19 19918648 0.723865686 5 18 173 0.896551724 1.414973348 0 0.315789474 0.551724138 19 3 0 26 3L:19918622-19918667 7 18 1687 FBgn0020887 388.31 12.01333333 18.55333333 0.046354717 1.498335183 0.970176069 8 6 7 0.2 dme-miR-34-5p 8mer-A1 CACTGCCA 3L 19919163 19919170 - 3L_19919163_19919170_- 0.678074378 0.677911485 0.677992932 0.000115188 Su(z)12 FBtr0074916 19918240 19919365 3L - 19919123 19919196 3'utr Su(z)12 FlyBase G38494.2 CAACCGCAACAAAAGCAATAACCATTCACTGCCAGCAACCAGTAACAACGCCAGTAGCAGCAGCAGCAACAGCA 173 19919172 0.999927653 5 171 540 0.979695431 1.586587305 0.020304569 0.10982659 0.218274112 173 0 4 193 3L:19919123-19919196 8 Su(z)12 FBtr0074916 19918240 19919365 CACTGCCA 8mer-A1 dme-miR-34-5p 3L - 19919122 19919195 3'utr Su(z)12 FlyBase G29082.1 AACCGCAACAAAAGCAATAACCATTCACTGCCAGCAACCAGTAACAACGCCAGTAGCAGCAGCAGCAACAGCAA 80 19919172 0.907329834 3 78 240 0.936507937 2.071882007 0 0.3375 0.579365079 80 8 0 118 3L:19919122-19919195 8 123 1688 FBgn0020887 388.31 12.01333333 18.55333333 0.31675723 10.23862375 6.629536471 2 2 2 0.2 dme-miR-965-3p 7mer-m8 TACGCTT 3L 19932238 19932244 + 3L_19932238_19932244_+ 0.620172169 0.620200994 0.620186582 2.04E-05 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 3L + 19932217 19932276 3'utr RhoGDI FlyBase G31574.1 CACAACTTACAACATACATCATACGCTTTTTGTTTTCCCTCAAACATGCCTTGTAAATGA 53 19932238 0.839527775 8 49 492 0.9375 1.176091259 0.125 0.20754717 0.34375 53 1 3 60 3L:19932217-19932276 7 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 TACGCTT 7mer-m8 dme-miR-965-3p 3L + 19932211 19932272 3'utr RhoGDI FlyBase G23873.1 ACGACACACAACTTACAACATACATCATACGCTTTTTGTTTTCCCTCAAACATGCCTTGTAA 49 19932245 0.923595682 7 42 441 0.882352941 1.77815125 0.235294118 0.367346939 0.544117647 49 8 0 60 3L:19932211-19932272 7 47.5 1689 FBgn0036921 5639.993333 451.2133333 691.66 0.008421996 0.105271712 0.068675361 0 -7 -3.5 0.2 dme-miR-263a-5p 7mer-m1 TGCCATT 3L 19932569 19932575 + 3L_19932569_19932575_+ 0.764870428 0.763380643 0.764125535 0.001053448 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 3L + 19932425 19932592 3'utr RhoGDI FlyBase G31576.2 AATTGGAATGTGTGCAGATGAAGAGCATTTTTCGCCTAAGTCCTCCTCAATGAGAGTCAAGTCAAAACCAAGTCAAGTCACTAGGCCAGTCAGTCAGTCAGTCAGCCAACCAGTCAGTCAGACAGTCAGTCGTTTGGTTCTTAATGCCATTGCCTATGTTTAACATAC 52 19932569 0.873984594 18 48 345 0.967741935 1.77815125 0.129032258 0.173076923 0.306451613 52 2 0 60 3L:19932425-19932592 7 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 TGCCATT 7mer-m1 dme-miR-263a-5p 3L + 19932387 19932594 3'utr RhoGDI FlyBase G23875.1 TGTAAAGCCATGATAAGTATTTTTGATACCCTATTTGCAATTGGAATGTGTGCAGATGAAGAGCATTTTTCGCCTAAGTCCTCCTCAATGAGAGTCAAGTCAAAACCAAGTCAAGTCACTAGGCCAGTCAGTCAGTCAGTCAGCCAACCAGTCAGTCAGACAGTCAGTCGTTTGGTTCTTAATGCCATTGCCTATGTTTAACATACAT 46 19932569 0.98282691 21 43 325 0.971830986 1.537819095 0.14084507 0.347826087 0.577464789 46 1 1 69 3L:19932387-19932594 7 13.5 1690 FBgn0036921 5639.993333 451.2133333 691.66 0.00239362 0.029919329 0.01951826 0 0 0 0.2 dme-miR-277-3p 7mer-m8 TGCATTT 3L 19932641 19932647 + 3L_19932641_19932647_+ 0.5945836 0.524999834 0.559791717 0.049203177 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 3L + 19932629 19932659 3'utr RhoGDI FlyBase G31577.1 AAGAAAGTTGTTTGCATTTCGCTGTGTATTT 8 19932643 0.620224681 2 8 74 1 1 0.6 0.25 0.4 8 0 0 10 3L:19932629-19932659 7 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 TGCATTT 7mer-m8 dme-miR-277-3p 3L + 19932629 19932658 3'utr RhoGDI FlyBase G23876.1 AAGAAAGTTGTTTGCATTTCGCTGTGTATT 8 19932646 0.66493294 4 8 78 1 1.146128036 0.285714286 0.625 0.785714286 8 0 0 14 3L:19932629-19932658 7 8 1691 FBgn0036921 5639.993333 451.2133333 691.66 0.001418441 0.017729973 0.011566377 -2 -5 -3.5 0.2 dme-miR-33-5p 7mer-A1 AATGCAA 3L 19932884 19932890 + 3L_19932884_19932890_+ 0.770912823 0.778508723 0.774710773 0.005371112 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 3L + 19932817 19932902 3'utr RhoGDI FlyBase G31579.1 ATTATTCTAACTATATATCTCTGTGTATTTTTTGTGTACAACATACCATATATGCGAAAGCTGATTGAATGCAACCGAAGAGCAAT 35 19932882 0.957582578 5 34 169 0.973684211 1.568201724 0.210526316 0.057142857 0.131578947 35 1 0 37 3L:19932817-19932902 7 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 AATGCAA 7mer-A1 dme-miR-33-5p 3L + 19932856 19932905 3'utr RhoGDI FlyBase G23877.1 AACATACCATATATGCGAAAGCTGATTGAATGCAACCGAAGAGCAATAAA 35 19932882 0.663941034 6 33 139 0.983050847 1.763427994 0.152542373 0.5 0.711864407 34 1 0 58 3L:19932856-19932905 7 31.5 1692 FBgn0036921 5639.993333 451.2133333 691.66 0.005585113 0.069811767 0.045542608 2 2 2 0.2 dme-miR-308-3p 8mer-m1 CTGTGATT 3L 19979131 19979138 - 3L_19979131_19979138_- 0.385560253 0.385559228 0.385559741 7.78E-07 CG14182 FBtr0074913|FBtr0346534|FBtr0331802 19978811|19978711|19978811 19979187|19979187|19979187 3L - 19979117 19979187 NoAnnotation G38510.1 AGACGTGACCACGGCATCGCTAGATTCCTCATTTCATTTGCAGTTTGCTCTGTGATTTGTTACATCTTTTG 131 19979139 0.810863064 16 124 1446 0.961783439 1.480006943 0.133757962 0.183206107 0.318471338 131 2 4 151 3L:19979117-19979187 8 CG14182 FBtr0331802|FBtr0346534|FBtr0074913 19978811|19978711|19978811 19979187|19979187|19979187 CTGTGATT 8mer-m1 dme-miR-308-3p 3L - 19979117 19979189 stop_codon CG14182 FlyBase G29094.1 AAAGACGTGACCACGGCATCGCTAGATTCCTCATTTCATTTGCAGTTTGCTCTGTGATTTGTTACATCTTTTG 86 19979131 0.992770266 12 80 925 0.946969697 2.096910013 0.075757576 0.465116279 0.651515152 86 7 0 125 3L:19979117-19979189 8 103.5 1693 FBgn0036922 39 5.416666667 8.226666667 2.653846154 19.10769231 12.58103728 1 -7 -3 0.2 dme-miR-282-5p 6mer2-7 GAGGCT 3L 20150143 20150148 - 3L_20150143_20150148_- 0.778106563 0.982829517 0.88046804 0.144760951 CG42674 FBtr0302712|FBtr0302713|FBtr0302715|FBtr0302714|FBtr0332699|FBtr0302716|FBtr0332698 20149612|20149612|20149612|20149612|20149612|20149612|20149612 20151571|20151571|20151571|20151571|20151571|20151571|20151571 3L - 20150108 20150172 3'utr CG42674 FlyBase G38525.1 TGATTTAAGGGACTACACCACAGTGAGGCTTTGGATTTGGCCAAACGATTTGTACATATTACCCC 63 20150149 0.965852218 5 61 327 0.971014493 1.826074803 0.333333333 0.079365079 0.15942029 63 2 0 67 3L:20150108-20150172 6 CG42674 FBtr0302714|FBtr0302715|FBtr0302713|FBtr0302712|FBtr0332698|FBtr0302716|FBtr0332699 20149612|20149612|20149612|20149612|20149612|20149612|20149612 20151571|20151571|20151571|20151571|20151571|20151571|20151571 GAGGCT 6mer2-7 dme-miR-282-5p 3L - 20150130 20150173 3'utr CG42674 FlyBase G29101.1 TTGATTTAAGGGACTACACCACAGTGAGGCTTTGGATTTGGCCA 41 20150149 0.925082029 2 40 195 0.985714286 1.838849091 0.2 0.487804878 0.7 41 1 0 69 3L:20150130-20150173 6 51 1694 FBgn0261556 3405.386667 53.14 81.81333333 0.014976273 0.959729018 0.623370274 1 1 1 0.2 dme-miR-8-3p 7mer-A1 AGTATTA 3L 20150610 20150616 - 3L_20150610_20150616_- 0.820778877 0.823028519 0.821903698 0.001590707 CG42674 FBtr0302712|FBtr0302713|FBtr0302715|FBtr0302714|FBtr0332699|FBtr0302716|FBtr0332698 20149612|20149612|20149612|20149612|20149612|20149612|20149612 20151571|20151571|20151571|20151571|20151571|20151571|20151571 3L - 20150593 20150642 3'utr CG42674 FlyBase G38527.1 ACGAAAAAGTTTGTATACCAATATAGAGTATTAGCCGATCTTCGGTCAAA 50 20150620 0.86578485 7 40 408 0.806451613 1.397940009 0.258064516 0.18 0.338709677 50 11 1 50 3L:20150593-20150642 7 CG42674 FBtr0302714|FBtr0302715|FBtr0302713|FBtr0302712|FBtr0332698|FBtr0302716|FBtr0332699 20149612|20149612|20149612|20149612|20149612|20149612|20149612 20151571|20151571|20151571|20151571|20151571|20151571|20151571 AGTATTA 7mer-A1 dme-miR-8-3p 3L - 20150595 20150635 3'utr CG42674 FlyBase G29102.2 AGTTTGTATACCAATATAGAGTATTAGCCGATCTTCGGTCA 37 20150620 0.893453878 5 21 265 0.633333333 1.278753601 0.2 0.405405405 0.633333333 37 21 1 38 3L:20150595-20150635 7 42.5 1695 FBgn0261556 3405.386667 53.14 81.81333333 0.012480227 0.799774181 0.519475228 4 4 4 0.2 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3L 20268977 20268984 - 3L_20268977_20268984_- 0.611033036 0.593348947 0.602190991 0.012504547 gogo FBtr0074848 20268857 20269444 3L - 20268960 20269031 3'utr gogo FlyBase G38601.1 ATGAAATTTTGTGATCTTCATTTTGTGCTTGTAAGCATTGGAAAAATTCTAGTCAATACATTAGTCAAAATT 36 20268985 0.840256325 7 35 276 0.976744186 1.322219295 0.139534884 0.138888889 0.279069767 36 0 1 42 3L:20268960-20269031 8 gogo FBtr0074848 20268857 20269444 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L - 20268953 20269001 3'utr gogo FlyBase G29151.1 GTAAGCATTGGAAAAATTCTAGTCAATACATTAGTCAAAATTAATTAGC 19 20268985 0.974340804 3 19 128 1 1.491361694 0.096774194 0.473684211 0.677419355 19 0 0 31 3L:20268953-20269001 8 22.5 1696 FBgn0052227 17 0.396666667 0.6 1.323529412 56.72268908 37.5 1 1 1 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3L 20297348 20297353 - 3L_20297348_20297353_- 0.955282595 0.970973365 0.96312798 0.011095071 Pex23 FBtr0074846 20297127 20297459 3L - 20297298 20297421 3'utr Pex23 FlyBase G38605.1 ACGGACGATCCTGTTTGTTGTATTTATTCATATTTACAAGCTTATATGTGACCATGCCAACGCTTTTTCCAAAGTATATGAAAATAAGATGTTTCCTATTTAAGCTATTTGAAACGTATTATTT 62 20297355 0.985104955 14 59 476 0.960526316 1.562292864 0.184210526 0.177419355 0.328947368 62 2 1 73 3L:20297298-20297421 6 Pex23 FBtr0074846 20297127 20297459 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 20297320 20297391 3'utr Pex23 FlyBase G29154.1 TATTTACAAGCTTATATGTGACCATGCCAACGCTTTTTCCAAAGTATATGAAAATAAGATGTTTCCTATTTA 36 20297378 0.980915157 14 32 231 0.842105263 1.681241237 0.105263158 0.444444444 0.649122807 36 9 0 48 3L:20297320-20297391 6 15.5 1697 FBgn0052226 261.2133333 7.016666667 10.72666667 0.059338472 2.209026128 1.444996892 2 25 13.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3L 20308852 20308857 + 3L_20308852_20308857_+ 0.999943454 0.999999893 0.999971674 3.99E-05 CG6597 FBtr0074837|FBtr0332775|FBtr0074838|FBtr0344228 20308825|20308825|20308825|20308825 20309194|20309511|20309511|20309194 3L + 20308802 20308927 stop_codon CG6597 FlyBase G31674.2 CACCTCCACAACCGGATCTAGCTGAGAAAAGCTGTATCGAGTCGCCTATTTCTAGTTCAACTTTGGGAGCTCAGTGCGGAGAGGAGTTCGCGGAGACTGAGTCGGAGATGGGATGCGATGCGATGG 27 20308852 0.979593359 12 25 167 0.96875 1.491361694 0.4375 0.111111111 0.25 27 1 0 31 3L:20308802-20308927 6 CG6597 FBtr0074838|FBtr0344228|FBtr0074837|FBtr0332775 20308825|20308825|20308825|20308825 20309511|20309194|20309194|20309511 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 20308839 20308909 5'utr CG6597 FlyBase G23948.1 CGAGTCGCCTATTTCTAGTTCAACTTTGGGAGCTCAGTGCGGAGAGGAGTTCGCGGAGACTGAGTCGGAGA 15 20308852 0.984716353 6 13 104 0.92 1.361727836 0.2 0.466666667 0.68 15 2 0 23 3L:20308839-20308909 6 12.5 1698 FBgn0036967 626.6566667 51.31333333 78.75333333 0.019947127 0.243601403 0.15872344 0 0 0 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 20382257 20382262 + 3L_20382257_20382262_+ 0.9988184 0.999999433 0.999408917 0.000835093 RhoBTB FBtr0078185|FBtr0330157|FBtr0330158 20381697|20381881|20381697 20382398|20382398|20382398 3L + 20382186 20382292 3'utr RhoBTB FlyBase G31744.2 TTGTTCTGCACGATCCCTCCCATGGAATGTGGACAGCCGAAGGACGCAGACATGTGTATATCCATATATTTGTACCTTTACCTAAGACATGTATGTATGTATATTTT 19 20382265 0.893786405 13 18 165 0.954545455 1.021189299 0.181818182 0.157894737 0.272727273 19 0 1 21 3L:20382186-20382292 6 RhoBTB FBtr0330158|FBtr0078185|FBtr0330157 20381697|20381697|20381881 20382398|20382398|20382398 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 20382247 20382284 3'utr RhoBTB FlyBase G24002.1 CCATATATTTGTACCTTTACCTAAGACATGTATGTATG 10 20382263 0.601295405 4 8 89 0.857142857 0.77815125 0.571428571 0.4 0.571428571 10 1 1 12 3L:20382247-20382284 6 10 1699 FBgn0036980 400.9966667 15.65333333 23.82333333 0.024937863 0.638841567 0.419756541 -8 -6 -7 0.2 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 20391198 20391203 + 3L_20391198_20391203_+ 0.688786259 0.633442837 0.661114548 0.039133764 fbl FBtr0307392|FBtr0078189|FBtr0307393|FBtr0078186|FBtr0078190|FBtr0078187|FBtr0078188 20391181|20391181|20391181|20391181|20391181|20391181|20391181 20391454|20391913|20391913|20391454|20391454|20391913|20391454 3L + 20391166 20391225 stop_codon fbl FlyBase G31756.1 AACACTCCACTAGATAGTCGCTATAACCACATGTTCCTCCCAAGGGCACCCAACGTGCGC 105 20391197 0.78491325 4 105 522 1 2.06069784 0.060869565 0.095238095 0.173913043 105 0 0 115 3L:20391166-20391225 6 fbl FBtr0078187|FBtr0078188|FBtr0078190|FBtr0307393|FBtr0078186|FBtr0307392|FBtr0078189 20391181|20391181|20391181|20391181|20391181|20391181|20391181 20391913|20391454|20391454|20391913|20391454|20391454|20391913 GTTCCT 6mer2-7 dme-miR-276a-3p 3L + 20391167 20391229 stop_codon fbl FlyBase G24012.1 ACACTCCACTAGATAGTCGCTATAACCACATGTTCCTCCCAAGGGCACCCAACGTGCGCCAGC 58 20391197 0.919911695 3 58 296 1 1.963787827 0.054347826 0.379310345 0.608695652 58 0 0 92 3L:20391167-20391229 6 80.5 1700 FBgn0011205 689.3733333 36.86333333 56.25 0.116772721 2.183741749 1.431111111 1 1 1 0.2 dme-miR-968-5p 7mer-A1 CTACTTA 3L 20391837 20391843 + 3L_20391837_20391843_+ 0.811148858 0.79824069 0.804694774 0.009127476 fbl FBtr0078189|FBtr0307393|FBtr0078187 20391181|20391181|20391181 20391913|20391913|20391913 3L + 20391786 20391914 3'utr fbl FlyBase G31761.1 TGATGATACAGTTTAAAAACAAGACGGTAATAGCCTTCTCTCTACCTTTGCCTACTTATACAATTATTGTTAAGGTTTGTGTTATTCTAAAAAAATTCCGTAATAAACTAGACACGAGTTGTTCTGATA 32 20391834 0.987834736 12 29 259 0.911111111 1.135662602 0.155555556 0.28125 0.488888889 32 2 2 41 3L:20391786-20391914 7 fbl FBtr0078187|FBtr0307393|FBtr0078189 20391181|20391181|20391181 20391913|20391913|20391913 CTACTTA 7mer-A1 dme-miR-968-5p 3L + 20391797 20391839 3'utr fbl FlyBase G24017.1 TTTAAAAACAAGACGGTAATAGCCTTCTCTCTACCTTTGCCTA 12 20391834 0.986940158 2 11 97 0.941176471 0.903089987 0.058823529 0.25 0.470588235 12 0 1 16 3L:20391797-20391839 3 12.5 1701 FBgn0011205 689.3733333 36.86333333 56.25 0.01813241 0.339090334 0.222222222 3 3 3 0.2 dme-miR-1008-3p 7mer-A1 GCTGTGA 3L 20428169 20428175 - 3L_20428169_20428175_- 0.816025788 0.822006762 0.819016275 0.004229206 CG5262 FBtr0078230|FBtr0310615 20428098|20427960 20428352|20428352 3L - 20428141 20428206 3'utr CG5262 FlyBase G38672.1 ATTTTAGCAACGTAAGTCAGTATTGAAATCGGCTGTGACACAAATTTTCAATATATTTTTTATATA 101 20428184 0.969421902 9 92 650 0.920353982 1.539912085 0.10619469 0.118811881 0.212389381 101 7 2 104 3L:20428141-20428206 7 CG5262 FBtr0078230|FBtr0310615 20428098|20427960 20428352|20428352 GCTGTGA 7mer-A1 dme-miR-1008-3p 3L - 20428151 20428213 3'utr CG5262 FlyBase G29203.1 TAATCGAATTTTAGCAACGTAAGTCAGTATTGAAATCGGCTGTGACACAAATTTTCAATATAT 69 20428182 0.673608042 10 59 430 0.845360825 1.135662602 0.257731959 0.31884058 0.515463918 69 10 5 82 3L:20428151-20428213 7 77 1702 FBgn0036988 148.2966667 9.42 14.41 0.519229472 8.174097665 5.34351145 9 7 8 0.2 dme-miR-970-3p 6mer3-8 TCTTAT 3L 20428343 20428348 - 3L_20428343_20428348_- 0.99324839 0.991447922 0.992348156 0.001273146 CG5262 FBtr0078230|FBtr0310615 20428098|20427960 20428352|20428352 3L - 20428326 20428354 stop_codon CG5262 FlyBase G38673.1 AAGTTATCTTATCTGCCAATGTGGAGATA 5 20428346 0.591025554 4 5 37 1 0.698970004 0 0 0 5 0 0 5 3L:20428326-20428354 6 CG5262 FBtr0078230|FBtr0310615 20428098|20427960 20428352|20428352 TCTTAT 6mer3-8 dme-miR-970-3p 3L - 20428329 20428354 stop_codon CG5262 FlyBase G29205.1 AAGTTATCTTATCTGCCAATGTGGAG 6 20428346 0.683066354 3 5 38 0.6 0.77815125 0 0.333333333 0.6 6 4 0 6 3L:20428329-20428354 6 5 1703 FBgn0036988 148.2966667 9.42 14.41 0.0337162 0.530785563 0.346981263 -2 -2 -2 0.2 dme-miR-252-5p 8mer-m1 GTACTTAG 3L 20450494 20450501 + 3L_20450494_20450501_+ 0.636132364 0.636586198 0.636359281 0.000320885 CG5910 FBtr0300411|FBtr0078195 20450395|20450395 20450580|20450580 3L + 20450459 20450521 3'utr CG5910 FlyBase G31807.1 AAGTAGGATCTAGTCGTAGTAGCATTCAAATAAGTGTACTTAGTTCAACAAATGTCCAGTGGT 7 20450498 0.897652122 5 6 40 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 3L:20450459-20450521 8 CG5910 FBtr0300411|FBtr0078195 20450395|20450395 20450580|20450580 GTACTTAG 8mer-m1 dme-miR-252-5p 3L + 20450455 20450514 3'utr CG5910 FlyBase G24046.1 AGAGAAGTAGGATCTAGTCGTAGTAGCATTCAAATAAGTGTACTTAGTTCAACAAATGTC 7 20450498 0.983702598 5 5 41 0.75 0.77815125 0.375 0.142857143 0.25 7 2 0 6 3L:20450455-20450514 8 3 1704 FBgn0036993 5.333333333 0.613333333 0.916666667 0.5625 4.891304348 3.272727273 -4 -4 -4 0.2 dme-miR-8-3p 6mer2-7 AGTATT 3L 20469711 20469716 - 3L_20469711_20469716_- 0.945804119 0.970260851 0.958032485 0.017293569 CG32428 FBtr0303381 20469672 20469796 3L - 20469700 20469747 3'utr CG32428 FlyBase G38694.1 AAGCTGTCGCAAACTAAAGGTGCTTACCAATAGTATTTGAGTTCGAAT 18 20469710 0.700257765 5 18 119 1 1.380211242 0.416666667 0.166666667 0.375 18 0 0 24 3L:20469700-20469747 6 CG32428 FBtr0303381 20469672 20469796 AGTATT 6mer2-7 dme-miR-8-3p 3L - 20469696 20469747 3'utr CG32428 FlyBase G29214.1 AAGCTGTCGCAAACTAAAGGTGCTTACCAATAGTATTTGAGTTCGAATAAAC 14 20469710 0.687443341 5 13 95 1 1.301029996 0.3 0.285714286 0.5 14 0 0 20 3L:20469696-20469747 6 11.5 1705 FBgn0052428 469.8933333 37.72333333 57.65 0.024473639 0.304851109 0.199479618 -6 -6 -6 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 20470525 20470532 - 3L_20470525_20470532_- 0.481421571 0.483429777 0.482425674 0.001420012 CG32428 FBtr0300452 20470021 20470894 3L - 20470514 20470556 3'utr CG32428 FlyBase G38700.1 TAAGTCGAACATCGAACATAAACTGTACTTAACTACCTAAAGA 170 20470533 0.821063557 3 170 1032 1 2.322219295 0.161904762 0.205882353 0.357142857 170 0 0 210 3L:20470514-20470556 8 CG32428 FBtr0300452 20470021 20470894 GTACTTAA 8mer-A1 dme-miR-252-5p 3L - 20470447 20470555 3'utr CG32428 FlyBase G29219.1 AAGTCGAACATCGAACATAAACTGTACTTAACTACCTAAAGAATTGAAATACGTAATTAATTTCAAAAAGTAATAGTTAGACCTGCGAAACATTGCAATCACAAAAAAG 141 20470533 0.97224245 7 141 838 1 2.274157849 0.143617021 0.29787234 0.473404255 141 0 0 188 3L:20470447-20470555 8 153.5 1706 FBgn0052428 469.8933333 37.72333333 57.65 0.326669883 4.069099585 2.662619254 1 1 1 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 20510939 20510944 + 3L_20510939_20510944_+ 0.570829641 0.940768789 0.755799215 0.261586517 CG32425 FBtr0113436|FBtr0078204 20510792|20510792 20511058|20511058 3L + 20510919 20510959 3'utr CG32425 FlyBase G31834.1 ACAACAAATGCTATACAAATACCAAATCTACACGAGCCGCC 16 20510938 0.940333725 2 14 66 0.888888889 1.204119983 0.055555556 0.125 0.222222222 16 2 0 16 3L:20510919-20510959 6 CG32425 FBtr0078204|FBtr0113436 20510792|20510792 20511058|20511058 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 20510891 20510983 3'utr CG32425 FlyBase G24063.1 ACAACTACCAATTCTACCACCAAGCAGAACAACAAATGCTATACAAATACCAAATCTACACGAGCCGCCCACAACCACGCCCACGCCTCCTGC 11 20510938 0.938303452 5 11 43 1 1.176091259 0 0.363636364 0.533333333 11 0 0 15 3L:20510891-20510983 6 11.5 1707 FBgn0052425 913.0466667 51.64333333 79.68666667 0.012595194 0.222681211 0.144315235 1 1 1 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 3L 20514032 20514037 + 3L_20514032_20514037_+ 0.900418818 0.716277219 0.808348019 0.130207774 CG32425 FBtr0078205|FBtr0078202|FBtr0078203 20513685|20513685|20513685 20514107|20514107|20514107 3L + 20514003 20514081 3'utr CG32425 FlyBase G31838.1 CCACACGGAATATGTATTAGTTTCGGAACTGTGTTAATCACCTAAGTATTTAGACACTATTACCTAATAAAACTTTAAA 26 20514035 0.976145597 10 21 220 0.8 1.079181246 0.033333333 0.153846154 0.266666667 26 5 1 24 3L:20514003-20514081 6 CG32425 FBtr0078202|FBtr0078205|FBtr0078203 20513685|20513685|20513685 20514107|20514107|20514107 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 20513997 20514045 3'utr CG32425 FlyBase G24070.1 CAGCAACCACACGGAATATGTATTAGTTTCGGAACTGTGTTAATCACCT 8 20514023 0.982026513 7 8 60 1 1.113943352 0 0.5 0.692307692 8 0 0 13 3L:20513997-20514045 6 12 1708 FBgn0052425 913.0466667 51.64333333 79.68666667 0.013142811 0.232363003 0.15058981 -3 9 3 0.2 dme-miR-980-3p 6mer3-8 GGCAGC 3L 20515006 20515011 - 3L_20515006_20515011_- 0.99978386 0.714133422 0.856958641 0.201985406 CG5059 FBtr0331567|FBtr0078217|FBtr0078219|FBtr0078218|FBtr0078216 20514596|20514597|20514596|20514596|20514597 20515331|20515331|20515331|20515331|20515331 3L - 20514965 20515038 3'utr CG5059 FlyBase G38709.1 AATTTTATATATTTAACATTATATCAAGGCAGCAAATCTAATGATACAGAAAAGCATTTATAGATGCTCCATAT 52 20514999 0.679503473 12 46 290 0.888888889 1.271066772 0 0.134615385 0.285714286 52 5 2 56 3L:20514965-20515038 6 CG5059 FBtr0078218|FBtr0078216|FBtr0078217|FBtr0078219|FBtr0331567 20514596|20514597|20514597|20514596|20514596 20515331|20515331|20515331|20515331|20515331 GGCAGC 6mer3-8 dme-miR-980-3p 3L - 20514967 20515036 3'utr CG5059 FlyBase G29226.1 TTTTATATATTTAACATTATATCAAGGCAGCAAATCTAATGATACAGAAAAGCATTTATAGATGCTCCAT 38 20514998 0.69539842 10 34 208 0.93442623 1.755874856 0 0.315789474 0.573770492 38 4 0 57 3L:20514967-20515036 6 38 1709 FBgn0037007 1992.566667 140.1466667 214.2533333 0.01907088 0.271144515 0.177360134 -12 -13 -12.5 0.2 dme-bantam-3p 8mer-A1 TGATCTCA 3L 20743899 20743906 + 3L_20743899_20743906_+ 0.631136278 0.631136337 0.631136307 0 CG13252 FBtr0078245 20743657 20744508 3L + 20743879 20743927 3'utr CG13252 FlyBase G31851.1 TGCCTTTATTTGTTTGGTATTGATCTCATTTAAACTTTTCACTCTTCAC 98 20743898 0.623514127 15 96 1093 0.983870968 1.785329835 0 0.214285714 0.379032258 98 1 1 122 3L:20743879-20743927 8 CG13252 FBtr0078245 20743657 20744508 TGATCTCA 8mer-A1 dme-bantam-3p 3L + 20743882 20743917 3'utr CG13252 FlyBase G24078.1 CTTTATTTGTTTGGTATTGATCTCATTTAAACTTTT 68 20743898 0.624469351 9 65 742 0.96875 1.491361694 0 0.294117647 0.5 68 1 2 93 3L:20743882-20743917 8 82.5 1710 FBgn0037016 248.3333333 12.01 18.50666667 0.332214765 6.869275604 4.457853026 1 1 1 0.2 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 20768379 20768386 - 3L_20768379_20768386_- 0.667285404 0.667568962 0.667427183 0.000200535 CG4074 FBtr0345811|FBtr0078280 20768205|20768340 20768406|20768406 3L - 20768362 20768405 3'utr CG4074 FlyBase G38739.1 CAAATAAACTTTCCAATATGGCAGCTATTTTATGAACATAAAAG 51 20768388 0.872123206 5 51 442 1 1.799340549 0 0.137254902 0.301587302 51 0 0 63 3L:20768362-20768405 8 CG4074 FBtr0345811|FBtr0078280 20768205|20768340 20768406|20768406 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L - 20768360 20768404 3'utr CG4074 FlyBase G29248.1 AAATAAACTTTCCAATATGGCAGCTATTTTATGAACATAAAAGTT 28 20768387 0.979479987 4 25 256 0.888888889 1.204119983 0 0.285714286 0.444444444 28 3 1 32 3L:20768360-20768404 8 39.5 1711 FBgn0037017 21.33333333 2.336666667 3.576666667 1.8515625 16.90442225 11.04380242 2 1 1.5 0.2 dme-miR-14-3p 6mer3-8 AAGACT 3L 20780187 20780192 + 3L_20780187_20780192_+ 0.493017548 0.760349368 0.626683458 0.189032199 Pex14 FBtr0078251 20780105 20780378 3L + 20780154 20780321 3'utr Pex14 FlyBase G31876.1 GCTGTAAATTGAGTTTCCCCGTTAAATGCCTTCAAGACTTTTGGTTTTTTTTCTTTGCGTTTATAGCATTTAAGGTTTCTTTATAGTCAACAGCTAATCCATATCCAAAAGTACATACACACACTCACATATACACACTTATGCGATACGATGTCTATACAATGTAAT 55 20780208 0.991396945 15 53 567 0.938461538 1.785329835 0.338461538 0.145454545 0.276923077 55 4 0 61 3L:20780154-20780321 6 Pex14 FBtr0078251 20780105 20780378 AAGACT 6mer3-8 dme-miR-14-3p 3L + 20780174 20780248 3'utr Pex14 FlyBase G24093.1 GTTAAATGCCTTCAAGACTTTTGGTTTTTTTTCTTTGCGTTTATAGCATTTAAGGTTTCTTTATAGTCAACAGCT 31 20780194 0.754003682 9 31 323 1 1.662757832 0.369565217 0.35483871 0.565217391 31 0 0 46 3L:20780174-20780248 6 15.5 1712 FBgn0037020 373.37 37.02333333 56.88333333 0.04151378 0.418654902 0.272487548 -21 -7 -14 0.2 dme-miR-33-5p 6mer2-7 AATGCA 3L 20780944 20780949 - 3L_20780944_20780949_- 0.905551361 0.886305071 0.895928216 0.013609189 CG11399 FBtr0078277 20780348 20781657 3L - 20780872 20781044 3'utr CG11399 FlyBase G38750.2 GAAATAGCTGATAAAAATGCCGGCCTGGCCGCTGTTTATCTTATACGATTGTACCCAACAAACAAGGGCCAAGCTACCCAACAAAAGACTCTAATAATGCATACATAGTATGGGTAGGGGTACTGTTCTCTATCCTTGTTTCAGGGTATTTCGCAATGGTTTGTCCATTCACA 46 20780952 0.963992638 14 44 213 0.962264151 1.707570176 0.169811321 0.130434783 0.245283019 46 2 0 51 3L:20780872-20781044 6 CG11399 FBtr0078277 20780348 20781657 AATGCA 6mer2-7 dme-miR-33-5p 3L - 20780940 20781000 3'utr CG11399 FlyBase G29255.1 ACGATTGTACCCAACAAACAAGGGCCAAGCTACCCAACAAAAGACTCTAATAATGCATACA 18 20780952 0.913435509 5 18 59 1 1.531478917 0.147058824 0.444444444 0.705882353 18 0 0 34 3L:20780940-20781000 6 10 1713 FBgn0037021 631 17.94666667 27.51333333 0.015847861 0.557206538 0.363460141 3 3 3 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT 3L 20781099 20781105 - 3L_20781099_20781105_- 0.656667967 0.65451814 0.655593054 0.001520209 CG11399 FBtr0078277 20780348 20781657 3L - 20781061 20781162 3'utr CG11399 FlyBase G38751.1 ATTTTTGTACTTCTTGTCAAAGCTTTAATTTTCAAACGTACACAGTGCTCGGCCTTTGGCAGCTGGTATTGCCCCCATCGCAAGGTATAATTAATTGTAAAT 138 20781106 0.771048009 16 137 943 0.993975904 2.217483944 0.186746988 0.173913043 0.313253012 138 1 0 165 3L:20781061-20781162 7 CG11399 FBtr0078277 20780348 20781657 GGCAGCT 7mer-m8 dme-miR-980-3p 3L - 20781061 20781126 3'utr CG11399 FlyBase G29256.1 CGTACACAGTGCTCGGCCTTTGGCAGCTGGTATTGCCCCCATCGCAAGGTATAATTAATTGTAAAT 102 20781106 0.773926277 7 102 651 1 2.204119983 0.2625 0.352941176 0.5875 102 0 0 160 3L:20781061-20781126 7 110 1714 FBgn0037021 631 17.94666667 27.51333333 0.174326466 6.129271917 3.998061546 1 1 1 0.2 dme-miR-970-3p 6mer3-8 TCTTAT 3L 20839152 20839157 - 3L_20839152_20839157_- 0.999915601 0.959345616 0.979630608 0.028687322 CSN3 FBtr0078269 20839094 20839324 3L - 20839123 20839182 3'utr CSN3 FlyBase G38790.1 CAGCTACCACAACAACAAACTGCGCTCTTATTGCAAATTTAAAGATGAACATGCTATTTT 12 20839155 0.97654121 4 12 78 1 1.176091259 0 0.166666667 0.333333333 12 0 0 15 3L:20839123-20839182 6 CSN3 FBtr0078269 20839094 20839324 TCTTAT 6mer3-8 dme-miR-970-3p 3L - 20839119 20839174 3'utr CSN3 FlyBase G29289.1 ACAACAACAAACTGCGCTCTTATTGCAAATTTAAAGATGAACATGCTATTTTAAAT 9 20839155 0.976491235 4 9 59 1 1.079181246 0 0.222222222 0.416666667 9 0 0 12 3L:20839119-20839174 6 9.5 1715 FBgn0027055 526.47 38.38666667 58.78666667 0.018044713 0.247481765 0.16160127 -2 -2 -2 0.2 dme-miR-31a-5p 6mer3-8 TCTTGC 3L 20839197 20839202 - 3L_20839197_20839202_- 0.999930124 0.999987799 0.999958961 4.08E-05 CSN3 FBtr0078269 20839094 20839324 3L - 20839187 20839266 3'utr CSN3 FlyBase G38791.1 ATCCCCAACACCGTTTACCAGAACTTGTCGAAGCCGCGAGGCCCTGGGCCCGAAAGCTGACGTCTCTTGCAGTCCGTACT 8 20839200 0.964220181 6 8 42 1 0.903089987 0 0 0 8 0 0 8 3L:20839187-20839266 6 CSN3 FBtr0078269 20839094 20839324 TCTTGC 6mer3-8 dme-miR-31a-5p 3L - 20839185 20839237 3'utr CSN3 FlyBase G29290.1 GAAGCCGCGAGGCCCTGGGCCCGAAAGCTGACGTCTCTTGCAGTCCGTACTCA 6 20839209 0.914893565 3 5 19 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 3L:20839185-20839237 6 4 1716 FBgn0027055 526.47 38.38666667 58.78666667 0.007597774 0.104202848 0.06804264 -2 7 2.5 0.2 dme-miR-305-5p 7mer-A1 GTACAAA 3L 20994476 20994482 - 3L_20994476_20994482_- 0.7819446 0.78251895 0.782231775 0.000406162 skd FBtr0078328|FBtr0112830|FBtr0078329|FBtr0333284 20994129|20994129|20992812|20994129 20995703|20995703|20995703|20995703 3L - 20994463 20994526 3'utr skd FlyBase G38807.1 CACATAGCCAATTTTCTAATAATGGAATACTTAAACGAAAATGTGTACAAATTAATAATAACGA 8 20994485 0.982249178 5 7 57 0.888888889 0.602059991 0.333333333 0.125 0.222222222 8 0 1 8 3L:20994463-20994526 7 skd FBtr0078329|FBtr0333284|FBtr0078328|FBtr0112830 20992812|20994129|20994129|20994129 20995703|20995703|20995703|20995703 GTACAAA 7mer-A1 dme-miR-305-5p 3L - 20994465 20994498 3'utr skd FlyBase G29300.1 ACTTAAACGAAAATGTGTACAAATTAATAATAAC 8 20994485 0.958967905 2 8 41 1 1.041392685 0 0.375 0.545454545 8 0 0 11 3L:20994465-20994498 7 6.5 1717 FBgn0003415 2022.95 23.24 35.72666667 0.003213129 0.279690189 0.181936929 3 3 3 0.2 dme-miR-999-3p 7mer-m8 AGTTAAC 3L 20995128 20995134 - 3L_20995128_20995134_- 0.497275583 0.647721665 0.572498624 0.106381458 skd FBtr0078328|FBtr0112830|FBtr0078329|FBtr0333284 20994129|20994129|20992812|20994129 20995703|20995703|20995703|20995703 3L - 20995117 20995147 3'utr skd FlyBase G38812.1 AATAGCGGAGTGGAGTTAACGCGAGAAACAT 8 20995132 0.893418574 4 7 21 0.8 0.903089987 0.1 0.25 0.4 8 2 0 8 3L:20995117-20995147 7 skd FBtr0078329|FBtr0333284|FBtr0078328|FBtr0112830 20992812|20994129|20994129|20994129 20995703|20995703|20995703|20995703 AGTTAAC 7mer-m8 dme-miR-999-3p 3L - 20995119 20995155 3'utr skd FlyBase G29304.1 ATATATACAATAGCGGAGTGGAGTTAACGCGAGAAAC 5 20995133 0.948251958 3 5 18 1 0.954242509 0 0.6 0.777777778 5 0 0 9 3L:20995119-20995155 7 6.5 1718 FBgn0003415 2022.95 23.24 35.72666667 0.003213129 0.279690189 0.181936929 -2 -1 -1.5 0.2 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 21074840 21074845 + 3L_21074840_21074845_+ 0.595389943 0.831052347 0.713221145 0.166638481 siz FBtr0078290|FBtr0301602|FBtr0078289|FBtr0111038 21074675|21074675|21074675|21074675 21075444|21075444|21075444|21075444 3L + 21074808 21074861 3'utr siz FlyBase G31948.1 CACAGCGTACGAGTATATAGTGAATTCTTAATGTTCCTTCGTTCTCTGCTAATA 29 21074839 0.99334016 3 26 322 0.914285714 1.505149978 0.057142857 0.206896552 0.342857143 29 3 0 32 3L:21074808-21074861 6 siz FBtr0078289|FBtr0111038|FBtr0078290|FBtr0301602 21074675|21074675|21074675|21074675 21075444|21075444|21075444|21075444 GTTCCT 6mer2-7 dme-miR-276a-3p 3L + 21074818 21074868 3'utr siz FlyBase G24146.1 GAGTATATAGTGAATTCTTAATGTTCCTTCGTTCTCTGCTAATATTAATGT 17 21074839 0.838481395 4 15 201 0.88 1.041392685 0 0.411764706 0.6 17 2 1 22 3L:21074818-21074868 6 22 1719 FBgn0026179 221.43 5.13 7.85 0.099354198 4.288499025 2.802547771 1 1 1 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3L 21136876 21136882 - 3L_21136876_21136882_- 0.588702744 0.629624084 0.609163414 0.028935799 Ac78C FBtr0330067|FBtr0301701|FBtr0333358|FBtr0330066|FBtr0305501 21136445|21136445|21136445|21136445|21136445 21137079|21137106|21137106|21137106|21137106 3L - 21136859 21136896 3'utr Ac78C FlyBase G38869.1 TATCTCAGCACAATTCTAGTCGTTAAACTTAAGAACTG 28 21136883 0.862302378 3 27 202 0.96875 1.491361694 0 0.107142857 0.21875 28 1 0 31 3L:21136859-21136896 7 Ac78C FBtr0305501|FBtr0330066|FBtr0333358|FBtr0301701|FBtr0330067 21136445|21136445|21136445|21136445|21136445 21137106|21137106|21137106|21137106|21137079 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3L - 21136861 21136899 3'utr Ac78C FlyBase G29348.1 ATTTATCTCAGCACAATTCTAGTCGTTAAACTTAAGAAC 17 21136883 0.848034139 2 17 130 1 1.414973348 0 0.352941176 0.576923077 17 0 0 26 3L:21136861-21136899 7 22.5 1720 FBgn0024150 386.8566667 7.673333333 11.87 0.058161076 2.932232841 1.895534962 1 1 1 0.2 dme-miR-2b-2-5p 7mer-m8 TTGAAGA 3L 21207651 21207657 + 3L_21207651_21207657_+ 0.363978357 0.536341674 0.450160015 0.121879258 CG10512 FBtr0078299|FBtr0078297|FBtr0078298|FBtr0078300 21207593|21207593|21207593|21207593 21208092|21208092|21208092|21208092 3L + 21207630 21207682 3'utr CG10512 FlyBase G31998.1 AAGCATACCCATTGCCATATGTTGAAGACGCCTCTGCATTTTGATGGACCAAA 40 21207641 0.739765202 12 39 250 0.976744186 1.62324929 0.418604651 0.075 0.139534884 40 1 0 42 3L:21207630-21207682 7 CG10512 FBtr0078300|FBtr0078298|FBtr0078297|FBtr0078299 21207593|21207593|21207593|21207593 21208092|21208092|21208092|21208092 TTGAAGA 7mer-m8 dme-miR-2b-2-5p 3L + 21207630 21207683 3'utr CG10512 FlyBase G24182.1 AAGCATACCCATTGCCATATGTTGAAGACGCCTCTGCATTTTGATGGACCAAAG 24 21207672 0.787194722 6 22 161 0.891891892 1.217483944 0.297297297 0.333333333 0.567567568 24 3 1 33 3L:21207630-21207683 7 28.5 1721 FBgn0037057 268.2233333 18.25666667 27.67 0.106254738 1.56107358 1.029996386 10 -21 -5.5 0.2 dme-miR-283-5p 8mer-m1 TGATATTT 3L 21207717 21207724 + 3L_21207717_21207724_+ 0.544561699 0.543537401 0.54404955 0.000724289 CG10512 FBtr0078299|FBtr0078297|FBtr0078298|FBtr0078300 21207593|21207593|21207593|21207593 21208092|21208092|21208092|21208092 3L + 21207690 21207828 3'utr CG10512 FlyBase G31999.1 AGTAACACTTTACACTGAGAGAAATATTGATATTTGCAACAGTTAGATTAGATTGCACTGGTGCTGAACTAAAGCTAGTTACATATCTCCATGTTGCACTTAAAACATATTTCTAGTCTCCTAAGAGTCTGTCGTTGCT 339 21207716 0.75351299 38 296 2568 0.883663366 1.950608225 0.222772277 0.16519174 0.29950495 339 44 3 357 3L:21207690-21207828 8 CG10512 FBtr0078300|FBtr0078298|FBtr0078297|FBtr0078299 21207593|21207593|21207593|21207593 21208092|21208092|21208092|21208092 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 21207690 21207830 3'utr CG10512 FlyBase G24183.1 AGTAACACTTTACACTGAGAGAAATATTGATATTTGCAACAGTTAGATTAGATTGCACTGGTGCTGAACTAAAGCTAGTTACATATCTCCATGTTGCACTTAAAACATATTTCTAGTCTCCTAAGAGTCTGTCGTTGCTCC 174 21207716 0.755643385 25 154 1326 0.882142857 2.392696953 0.210714286 0.454022989 0.660714286 174 33 0 247 3L:21207690-21207830 8 141.5 1722 FBgn0037057 268.2233333 18.25666667 27.67 0.527545453 7.750593391 5.113841706 1 1 1 0.2 dme-miR-317-3p 8mer-A1 TGTGTTCA 3L 21208040 21208047 + 3L_21208040_21208047_+ 0.429944852 0.378404158 0.404174505 0.036444778 CG10512 FBtr0078299|FBtr0078297|FBtr0078298|FBtr0078300 21207593|21207593|21207593|21207593 21208092|21208092|21208092|21208092 3L + 21207982 21208095 3'utr CG10512 FlyBase G32000.2 AAAACAAAAACTATCTGTTTTAAAATATATTGATTTTGGCACTTTGAGATACCCATGCTGTGTTCAGCAATTTCAAAACTATTAAAATAAACAATATACTCTTCGATAATCAAA 189 21208037 0.839962392 15 187 1232 0.991452991 2.064457989 0.017094017 0.201058201 0.354700855 189 1 1 232 3L:21207982-21208095 8 CG10512 FBtr0078300|FBtr0078298|FBtr0078297|FBtr0078299 21207593|21207593|21207593|21207593 21208092|21208092|21208092|21208092 TGTGTTCA 8mer-A1 dme-miR-317-3p 3L + 21208015 21208088 3'utr CG10512 FlyBase G24185.1 TTTTGGCACTTTGAGATACCCATGCTGTGTTCAGCAATTTCAAAACTATTAAAATAAACAATATACTCTTCGAT 165 21208037 0.853424493 10 157 1084 0.931034483 2.385606274 0.007662835 0.406060606 0.624521073 165 18 0 243 3L:21208015-21208088 8 168 1723 FBgn0037057 268.2233333 18.25666667 27.67 0.626343719 9.202117948 6.071557644 3 3 3 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 3L 21219029 21219034 + 3L_21219029_21219034_+ 0.988512117 0.710132972 0.849322545 0.196843749 Ilk FBtr0078305 21218943 21219240 3L + 21218965 21219172 3'utr Ilk FlyBase G32011.1 AAATGCCAAGCCAAAATGTGCCTTGAGAAACCTTAGATTTGCCAACTAATTGTAATTACTACTTTGTGTTACCTTTGTCTAACTGAGCCTAACCGAAAACCGTACCGAAATGGCAAAGCAAGTGCAACTGCTCTGTCTAGAGTTTATGTTTCTGTGTCTCACTGTTCTCTACTTATGATTTTCCGTCGATGTTTAGTGCGGGTGCTCG 123 21219040 0.948285788 29 115 1086 0.966887417 2.164352856 0.152317881 0.203252033 0.350993377 123 5 0 146 3L:21218965-21219172 6 Ilk FBtr0078305 21218943 21219240 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 21218972 21219085 3'utr Ilk FlyBase G24193.1 AAGCCAAAATGTGCCTTGAGAAACCTTAGATTTGCCAACTAATTGTAATTACTACTTTGTGTTACCTTTGTCTAACTGAGCCTAACCGAAAACCGTACCGAAATGGCAAAGCAA 52 21219040 0.988980554 13 48 452 0.956521739 1.944482672 0.086956522 0.461538462 0.695652174 52 4 0 88 3L:21218972-21219085 6 47.5 1724 FBgn0028427 517.3333333 43.88 67.08 0.09181701 1.082497721 0.70810972 -11 -11 -11 0.2 dme-miR-184-3p 6mer2-7 CCGTCC 3L 2126105 2126110 - 3L_2126105_2126110_- 0.759854263 0.755283594 0.757568928 0.003231973 zormin FBtr0332117 2117464 2126635 3L - 2126073 2126129 5'utr zormin FlyBase G33634.1 AACAGCCACAGGCCACATCCCGTCCGACCATGTACTACAATGCTGTTGCTGGAGCTC 141 2126112 0.96916555 3 139 307 0.987878788 2.212187604 0.012121212 0.141843972 0.266666667 141 2 0 163 3L:2126073-2126129 6 zormin FBtr0332117 2117464 2126635 CCGTCC 6mer2-7 dme-miR-184-3p 3L - 2126071 2126133 5'utr zormin FlyBase G25434.1 CAGAAACAGCCACAGGCCACATCCCGTCCGACCATGTACTACAATGCTGTTGCTGGAGCTCCG 48 2126112 0.967881844 3 48 80 1 1.886490725 0.051948052 0.479166667 0.675324675 48 0 0 77 3L:2126071-2126133 6 92.5 1725 FBgn0052311 753.3466667 9.526666667 14.67333333 0.122785437 9.709587124 6.303952749 2 2 2 0.2 dme-miR-307a-3p 7mer-A1 GTTGTGA 3L 21271302 21271308 - 3L_21271302_21271308_- 0.812180893 0.812113264 0.812147079 4.78E-05 AcCoAS FBtr0333126|FBtr0078413|FBtr0078414 21271207|21270720|21271207 21271704|21271704|21271704 3L - 21271274 21271342 3'utr AcCoAS FlyBase G38885.1 TCGTTGTAGTCGTAGTTTAAGTTCTCGCTAATTCGTTGTGATACAAATTTAATTATATCTTACTTATGT 255 21271309 0.736483011 18 230 2338 0.903846154 1.274157849 0.480769231 0.173228346 0.326923077 254 16 14 282 3L:21271274-21271342 7 AcCoAS FBtr0078413|FBtr0078414|FBtr0333126 21270720|21271207|21271207 21271704|21271704|21271704 GTTGTGA 7mer-A1 dme-miR-307a-3p 3L - 21271270 21271341 3'utr AcCoAS FlyBase G29358.1 CGTTGTAGTCGTAGTTTAAGTTCTCGCTAATTCGTTGTGATACAAATTTAATTATATCTTACTTATGTATGT 154 21271308 0.691948948 16 136 1388 0.887029289 1.627365857 0.464435146 0.376623377 0.59832636 154 23 4 212 3L:21271270-21271341 7 191.5 1726 FBgn0012034 1039.716667 45.38666667 69.30333333 0.184184794 4.219300823 2.763214853 1 0 0.5 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 3L 21280652 21280657 - 3L_21280652_21280657_- 0.999998247 0.99990835 0.999953298 6.36E-05 ppl FBtr0078412 21280489 21280688 3L - 21280624 21280742 stop_codon ppl FlyBase G38901.1 CTTATGACCGAGGATCAGTACAAAGCCTTCCTGAGCAGCAGTGGGGATCACTAGAACCAGCAGCTAATCCTAACCCTAAAGCATCTTGACTGTAGCCTTTAAAACGAGTAATTGTTAGC 33 21280650 0.971040779 9 31 183 0.918918919 1.054357662 0.054054054 0.090909091 0.189189189 33 1 2 34 3L:21280624-21280742 6 ppl FBtr0078412 21280489 21280688 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 21280638 21280670 3'utr ppl FlyBase G29373.1 ACCCTAAAGCATCTTGACTGTAGCCTTTAAAAC 15 21280656 0.634234328 3 15 92 1 1.380211242 0 0.466666667 0.666666667 15 0 0 24 3L:21280638-21280670 6 17 1727 FBgn0027945 285 39.5 59.95666667 0.059649123 0.430379747 0.283538111 -7 -1 -4 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 21302523 21302528 - 3L_21302523_21302528_- 0.450692621 0.721235995 0.585964308 0.191303073 CG11309 FBtr0078407|FBtr0078407|FBtr0078407|FBtr0331798|FBtr0331798|FBtr0331798|FBtr0321283|FBtr0321283|FBtr0321283|FBtr0321282|FBtr0321282|FBtr0321282|FBtr0345883|FBtr0345883|FBtr0345883|FBtr0078406|FBtr0078406|FBtr0078406 21302274|21302274|21302274|21302478|21302478|21302478|21302274|21302274|21302274|21302478|21302478|21302478|21301783|21301783|21301783|21302478|21302478|21302478 21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604 3L - 21302497 21302563 3'utr CG11309 FlyBase G38905.1 ATTGTACAGGTTTTTATACTTAATTGTTTATGCTATGTGATCGCGGCAGAGGACTCGGCTCTGCTAT 16 21302550 0.81657032 10 14 139 0.842105263 1.204119983 0.210526316 0.1875 0.315789474 16 3 0 16 3L:21302497-21302563 6 CG11309 FBtr0321282|FBtr0321282|FBtr0321282|FBtr0321283|FBtr0321283|FBtr0321283|FBtr0331798|FBtr0331798|FBtr0331798|FBtr0078407|FBtr0078407|FBtr0078407|FBtr0078406|FBtr0078406|FBtr0078406|FBtr0345883|FBtr0345883|FBtr0345883 21302478|21302478|21302478|21302274|21302274|21302274|21302478|21302478|21302478|21302274|21302274|21302274|21302478|21302478|21302478|21301783|21301783|21301783 21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 21302512 21302550 3'utr CG11309 FlyBase G29377.1 TTATACTTAATTGTTTATGCTATGTGATCGCGGCAGAGG 8 21302534 0.980490356 5 7 58 0.9 1.255272505 0.8 0.625 0.85 8 2 0 18 3L:21302512-21302550 6 8.5 1728 FBgn0037070 162.24 12.80666667 19.53 0.052391519 0.663716814 0.435227855 22 6 14 0.2 dme-miR-305-5p 7mer-m1 GTACAAT 3L 21306162 21306168 + 3L_21306162_21306168_+ 0.65945477 0.582914353 0.621184561 0.054122236 CG7632 FBtr0321281|FBtr0078339 21305971|21305971 21306197|21306197 3L + 21306129 21306192 3'utr CG7632 FlyBase G32042.1 TGGAAAATTGGTTGCTTCTATTTAATTTATTATGTACAATCAATACCGGCAATAACATTAATGT 8 21306171 0.922158544 4 8 58 1 0.954242509 0 0.125 0.222222222 8 0 0 9 3L:21306129-21306192 7 CG7632 FBtr0321281|FBtr0078339 21305971|21305971 21306197|21306197 GTACAAT 7mer-m1 dme-miR-305-5p 3L + 21306125 21306194 3'utr CG7632 FlyBase G24219.1 ACATTGGAAAATTGGTTGCTTCTATTTAATTTATTATGTACAATCAATACCGGCAATAACATTAATGTTA 14 21306137 0.89570349 6 13 110 0.933333333 0.84509804 0 0.071428571 0.133333333 14 0 1 14 3L:21306125-21306194 7 4.5 1729 FBgn0037071 107.9566667 9.143333333 13.89 0.041683391 0.492161867 0.323974082 -9 25 8 0.2 dme-miR-965-3p 8mer-A1 TACGCTTA 3L 21315830 21315837 - 3L_21315830_21315837_- 0.580574303 0.581802165 0.581188234 0.000868256 Pc FBtr0078405 21306136 21316423 3L - 21315800 21315873 5'utr Pc FlyBase G38913.1 AAGAAAACTCCATGCGAAACCGAAGCAATTGTTGATTACGCTTACAAATATATACAATAGAAGATGCATATATT 37 21315838 0.984513143 5 36 284 0.977777778 1.643452676 0.244444444 0.189189189 0.333333333 37 1 0 44 3L:21315800-21315873 8 Pc FBtr0078405 21306136 21316423 TACGCTTA 8mer-A1 dme-miR-965-3p 3L - 21315810 21315860 5'utr Pc FlyBase G29383.1 GCGAAACCGAAGCAATTGTTGATTACGCTTACAAATATATACAATAGAAGA 20 21315838 0.984584544 2 20 166 1 1.505149978 0.3125 0.3 0.5625 20 0 0 32 3L:21315810-21315860 8 27 1730 FBgn0003042 426.7466667 21.12 32.45666667 0.063269387 1.278409091 0.831878402 1 1 1 0.2 dme-miR-277-3p 7mer-m8 TGCATTT 3L 21423499 21423505 + 3L_21423499_21423505_+ 0.411053239 0.409548949 0.410301094 0.001063701 rgn FBtr0333386|FBtr0078346|FBtr0309230|FBtr0333385 21423268|21423268|21423268|21423268 21424061|21424416|21424061|21424061 3L + 21423465 21423544 3'utr rgn FlyBase G32060.1 ATCGCTGCGAAGCAGATTTTGTCGGTTAATTAATTGCATTTCGATCGAGCAGGAAACCCAATCTCCATGCGCTTCGCTAG 9 21423498 0.979194534 3 9 63 1 1 0.6 0.111111111 0.2 9 0 0 10 3L:21423465-21423544 7 rgn FBtr0309230|FBtr0333385|FBtr0333386|FBtr0078346 21423268|21423268|21423268|21423268 21424061|21424061|21424061|21424416 TGCATTT 7mer-m8 dme-miR-277-3p 3L + 21423487 21423549 3'utr rgn FlyBase G24234.1 CGGTTAATTAATTGCATTTCGATCGAGCAGGAAACCCAATCTCCATGCGCTTCGCTAGCTATT 9 21423498 0.883239931 2 9 68 1 1.146128036 0.285714286 0.555555556 0.714285714 9 0 0 14 3L:21423487-21423549 7 5.5 1731 FBgn0261258 1418.933333 41.47666667 64.17666667 0.003876151 0.132604677 0.08570093 1 1 1 0.2 dme-miR-965-3p 8mer-A1 TACGCTTA 3L 21436804 21436811 + 3L_21436804_21436811_+ 0.623178792 0.624863488 0.62402114 0.001191263 Aef1 FBtr0330156|FBtr0078348|FBtr0078350|FBtr0078349 21436646|21436208|21436208|21436208 21437491|21438639|21437491|21437491 3L + 21436763 21436827 3'utr Aef1 FlyBase G32068.1 AGGAGCAGCGATCGAGCCAGAAGTGAGCCATGTTTGGTGTGTACGCTTACGTTGTTGTTAGTTGT 11 21436803 0.99120693 4 10 108 1 1.079181246 0.25 0.090909091 0.166666667 11 0 0 12 3L:21436763-21436827 8 Aef1 FBtr0330156|FBtr0078348|FBtr0078350|FBtr0078349 21436646|21436208|21436208|21436208 21437491|21438639|21437491|21437491 TACGCTTA 8mer-A1 dme-miR-965-3p 3L + 21436741 21436827 3'utr Aef1 FlyBase G24241.1 GTGGAAATTCAGGAGCAGAAAGAGGAGCAGCGATCGAGCCAGAAGTGAGCCATGTTTGGTGTGTACGCTTACGTTGTTGTTAGTTGT 10 21436786 0.99966469 6 9 63 0.909090909 0.698970004 0.454545455 0.1 0.181818182 10 0 1 10 3L:21436741-21436827 8 6.5 1732 FBgn0005694 574.74 23.47666667 36.08 0.011309462 0.276870652 0.180155211 1 18 9.5 0.2 dme-miR-1012-3p 7mer-A1 TGACTAA 3L 21436872 21436878 + 3L_21436872_21436878_+ 0.749698134 0.637057332 0.693377733 0.079649074 Aef1 FBtr0330156|FBtr0078348|FBtr0078350|FBtr0078349 21436646|21436208|21436208|21436208 21437491|21438639|21437491|21437491 3L + 21436850 21436890 3'utr Aef1 FlyBase G32069.1 TTGTTGTTAAGGTTTAAATGTGTGACTAAGAACTTACCAAG 6 21436868 0.970241029 3 5 44 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 3L:21436850-21436890 7 Aef1 FBtr0330156|FBtr0078348|FBtr0078350|FBtr0078349 21436646|21436208|21436208|21436208 21437491|21438639|21437491|21437491 TGACTAA 7mer-A1 dme-miR-1012-3p 3L + 21436831 21436903 3'utr Aef1 FlyBase G24242.1 ATTGTAGCGAACATTGTTGTTGTTGTTAAGGTTTAAATGTGTGACTAAGAACTTACCAAGATGATTGTATAGC 11 21436870 0.977204163 7 11 80 1 1.342422681 0.363636364 0.545454545 0.772727273 11 0 0 22 3L:21436831-21436903 7 6 1733 FBgn0005694 574.74 23.47666667 36.08 0.010439503 0.255572909 0.166297118 4 2 3 0.2 dme-miR-988-3p 6mer2-7 CAAGGG 3L 21437378 21437383 + 3L_21437378_21437383_+ 0.999946779 0.999923472 0.999935126 1.65E-05 Aef1 FBtr0330156|FBtr0078348|FBtr0078350|FBtr0078349 21436646|21436208|21436208|21436208 21437491|21438639|21437491|21437491 3L + 21437338 21437410 3'utr Aef1 FlyBase G32070.1 GTTGTACAACTCAAAGTTGGTGACGTTTTTCGCCATCTTGCAAGGGCGTGTTTTAGTCTGGGCTAACACAAAT 15 21437376 0.982115308 7 14 106 1 1.230448921 0.352941176 0.133333333 0.235294118 15 0 0 17 3L:21437338-21437410 6 Aef1 FBtr0330156|FBtr0078348|FBtr0078350|FBtr0078349 21436646|21436208|21436208|21436208 21437491|21438639|21437491|21437491 CAAGGG 6mer2-7 dme-miR-988-3p 3L + 21437342 21437422 3'utr Aef1 FlyBase G24243.1 TACAACTCAAAGTTGGTGACGTTTTTCGCCATCTTGCAAGGGCGTGTTTTAGTCTGGGCTAACACAAATACAATTTGTTTA 17 21437376 0.959326012 7 17 112 1 1.491361694 0.483870968 0.411764706 0.677419355 17 0 0 31 3L:21437342-21437422 6 11.5 1734 FBgn0005694 574.74 23.47666667 36.08 0.020009048 0.489848076 0.318736142 2 2 2 0.2 dme-miR-305-5p 7mer-A1 GTACAAA 3L 21437764 21437770 + 3L_21437764_21437770_+ 0.777086619 0.781820868 0.779453744 0.003347656 Aef1 FBtr0078348 21436208 21438639 3L + 21437747 21437806 3'utr Aef1 FlyBase G32073.1 GTAAAGCAACAAGTTCTGTACAAAGCCCAACTCCAATTTGTATGTATAAAGCGAAAGCGA 8 21437761 0.940178436 5 8 35 1 0.903089987 0 0 0 8 0 0 8 3L:21437747-21437806 7 Aef1 FBtr0078348 21436208 21438639 GTACAAA 7mer-A1 dme-miR-305-5p 3L + 21437751 21437786 3'utr Aef1 FlyBase G24245.1 AGCAACAAGTTCTGTACAAAGCCCAACTCCAATTTG 6 21437762 0.758988063 4 5 23 0.857142857 0.77815125 0.142857143 0.166666667 0.285714286 6 1 0 6 3L:21437751-21437786 7 6 1735 FBgn0005694 574.74 23.47666667 36.08 0.010439503 0.255572909 0.166297118 3 2 2.5 0.2 dme-miR-1007-3p 6mer3-8 TGAGCT 3L 21438978 21438983 - 3L_21438978_21438983_- 0.962746179 0.986444421 0.9745953 0.016757158 CG5664 FBtr0331822 21438626 21439731 3L - 21438965 21439002 3'utr CG5664 FlyBase G38953.2 ACCTATCTGAACAACTTTCTGAGCTATGAAGAGTCCAT 8 21438983 0.771730533 2 7 50 0.888888889 0.602059991 0.111111111 0.125 0.222222222 8 0 1 8 3L:21438965-21439002 6 CG5664 FBtr0331822 21438626 21439731 TGAGCT 6mer3-8 dme-miR-1007-3p 3L - 21438935 21439002 3'utr CG5664 FlyBase G29421.1 ACCTATCTGAACAACTTTCTGAGCTATGAAGAGTCCATGTCTCCAGTAGACTCTGCGTCTTCCTCCTT 7 21438983 0.979021754 3 7 56 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3L:21438935-21439002 6 6.5 1736 FBgn0037082 240.3466667 11.07666667 16.92666667 0.027044269 0.586819139 0.384009453 0 0 0 0.2 dme-miR-282-5p 6mer2-7 GAGGCT 3L 21439311 21439316 - 3L_21439311_21439316_- 0.99999965 0.999332823 0.999666236 0.000471499 CG5664 FBtr0331822 21438626 21439731 3L - 21439292 21439388 3'utr CG5664 FlyBase G38954.1 AGTTGTCGCGTGAGGATTACCTAGCATTACTCCTTAGCGCCTTAAAAGACTATGACAAGTGGTTAAATCTTGGAGGCTTTTGGAAGTACCTAATGAG 16 21439318 0.987719868 7 15 129 0.952380952 1.301029996 0.285714286 0.3125 0.476190476 16 1 0 20 3L:21439292-21439388 6 CG5664 FBtr0331822 21438626 21439731 GAGGCT 6mer2-7 dme-miR-282-5p 3L - 21439300 21439332 3'utr CG5664 FlyBase G29422.1 AAGTGGTTAAATCTTGGAGGCTTTTGGAAGTAC 7 21439318 0.770065742 3 7 61 1 1.079181246 0.083333333 0.428571429 0.666666667 7 0 0 12 3L:21439300-21439332 6 9 1737 FBgn0037082 240.3466667 11.07666667 16.92666667 0.037445911 0.812518808 0.531705396 2 2 2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3L 21439663 21439670 - 3L_21439663_21439670_- 0.64588409 0.633198445 0.639541267 0.008970144 CG5664 FBtr0331822|FBtr0331822|FBtr0331822 21438626|21438626|21438626 21439731|21439731|21439731 3L - 21439608 21439685 3'utr CG5664 FlyBase G38955.1 AGTACGAGGATAATGCTGTGATATATCCTAGTATGGGACCCCAAACCCATCTGCTCATCGAAGACTTCTTCAAGATTT 17 21439672 0.980565538 8 16 114 0.947368421 1.255272505 0.263157895 0.117647059 0.210526316 17 1 0 18 3L:21439608-21439685 8 CG5664 FBtr0331822|FBtr0331822|FBtr0331822 21438626|21438626|21438626 21439731|21439731|21439731 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 21439646 21439690 3'utr CG5664 FlyBase G29423.1 GCTAAAGTACGAGGATAATGCTGTGATATATCCTAGTATGGGACC 10 21439673 0.986967979 3 8 73 0.8 1.079181246 0.4 0.3 0.533333333 10 3 0 12 3L:21439646-21439690 8 11.5 1738 FBgn0037082 240.3466667 11.07666667 16.92666667 0.047847554 1.038218477 0.679401339 2 3 2.5 0.2 dme-miR-307a-3p 7mer-A1 GTTGTGA 3L 21447696 21447702 + 3L_21447696_21447702_+ 0.823129935 0.815119282 0.819124608 0.00566435 Syx7 FBtr0078351|FBtr0078352 21447650|21447650 21448128|21448128 3L + 21447645 21447719 stop_codon Syx7 FlyBase G32078.1 GAATTAGAGCCTTCCGGCATCTCCGAATGATTCAAACCAAACTAGTAAATTGTTGTGAAAAGACAAGAGTTGCCG 9 21447695 0.977275824 7 8 53 0.818181818 0.954242509 0.181818182 0.222222222 0.363636364 9 2 0 9 3L:21447645-21447719 7 Syx7 FBtr0078351|FBtr0078352 21447650|21447650 21448128|21448128 GTTGTGA 7mer-A1 dme-miR-307a-3p 3L + 21447669 21447720 3'utr Syx7 FlyBase G24253.1 GAATGATTCAAACCAAACTAGTAAATTGTTGTGAAAAGACAAGAGTTGCCGC 11 21447696 0.971281813 5 9 55 0.944444444 1.230448921 0.055555556 0.636363636 0.777777778 11 1 0 17 3L:21447669-21447720 7 8 1739 FBgn0086377 809 63.10333333 96.81333333 0.009888752 0.126776187 0.082633246 1 0 0.5 0.2 dme-miR-305-5p 8mer-A1 AGTACAAA 3L 21497809 21497816 - 3L_21497809_21497816_- 0.599674168 0.594928269 0.597301218 0.003355858 Glg1 FBtr0078388|FBtr0332717 21497547|21497547 21498214|21498214 3L - 21497801 21497838 3'utr Glg1 FlyBase G38971.1 TACGGCAGAGCGCCTAGTTTTGAGTACAAAAGTTAAGT 40 21497819 0.944767221 5 40 264 1 1.643452676 0.25 0.1 0.181818182 40 0 0 44 3L:21497801-21497838 8 Glg1 FBtr0078388|FBtr0332717 21497547|21497547 21498214|21498214 AGTACAAA 8mer-A1 dme-miR-305-5p 3L - 21497805 21497837 3'utr Glg1 FlyBase G29436.1 ACGGCAGAGCGCCTAGTTTTGAGTACAAAAGTT 12 21497819 0.961536889 3 12 80 1 1.278753601 0.210526316 0.5 0.684210526 12 0 0 19 3L:21497805-21497837 8 26 1740 FBgn0264561 1367.6 37.22 56.66666667 0.019011407 0.698549167 0.458823529 3 3 3 0.2 dme-miR-14-3p 6mer2-7 AGACTG 3L 21498199 21498204 - 3L_21498199_21498204_- 0.94908274 0.992977913 0.971030326 0.031038594 Glg1 FBtr0078388|FBtr0332717 21497547|21497547 21498214|21498214 3L - 21498137 21498276 stop_codon Glg1 FlyBase G38974.1 TCCTCACCGGCATCTTCCTGGGACGGGCCACCAAACGGGCAATGGGCTTAAAGAATAAATAATTGAAATATTAGACTGTAGTGGCACTGTGTAGGCGGAGTGTGCATGTTTGTGAGCTTGCTGATTTCCATTTCGGCCCA 546 21498206 0.989258442 20 532 3875 0.968553459 1.886490725 0.11163522 0.137362637 0.259433962 546 13 7 616 3L:21498137-21498276 6 Glg1 FBtr0078388|FBtr0332717 21497547|21497547 21498214|21498214 AGACTG 6mer2-7 dme-miR-14-3p 3L - 21498151 21498257 stop_codon Glg1 FlyBase G29439.1 GGGACGGGCCACCAAACGGGCAATGGGCTTAAAGAATAAATAATTGAAATATTAGACTGTAGTGGCACTGTGTAGGCGGAGTGTGCATGTTTGTGAGCTTGCTGATT 269 21498206 0.980399184 12 249 1763 0.941860465 1.653212514 0.11627907 0.423791822 0.639534884 269 17 8 405 3L:21498151-21498257 6 356.5 1741 FBgn0264561 1367.6 37.22 56.66666667 0.260675636 9.578183772 6.291176471 2 2 2 0.2 dme-miR-305-3p 7mer-m8 ATGTGCC 3L 21511831 21511837 + 3L_21511831_21511837_+ 0.667232102 0.670716192 0.668974147 0.002463631 M6 FBtr0339793 21511707 21512749 3L + 21511781 21511865 3'utr M6 FlyBase G32087.1 TGGCCACTCTGTCCACCCTTTTGGTGCTGCTCAGTCTGGTCCACTACCTGATGTGCCTGTCTGCTAACTACGCCCACATTCGGGA 23 21511832 0.985853263 5 22 171 0.961538462 1.397940009 0.269230769 0.086956522 0.192307692 23 1 0 25 3L:21511781-21511865 7 M6 FBtr0339793 21511707 21512749 ATGTGCC 7mer-m8 dme-miR-305-3p 3L + 21511808 21511847 3'utr M6 FlyBase G24260.1 TGCTCAGTCTGGTCCACTACCTGATGTGCCTGTCTGCTAA 7 21511832 0.811613588 2 7 59 1 1.113943352 0 0.857142857 0.923076923 7 0 0 13 3L:21511808-21511847 7 12.5 1742 FBgn0037092 152.03 9.373333333 14.24333333 0.082220614 1.333570413 0.877603557 -1 -1 -1 0.2 dme-miR-184-3p 8mer-A1 TCCGTCCA 3L 21512254 21512261 + 3L_21512254_21512261_+ 0.509970743 0.501034528 0.505502635 0.006318848 M6 FBtr0332712|FBtr0332713|FBtr0078356|FBtr0332714|FBtr0332715|FBtr0339793 21511946|21511946|21511946|21511946|21511946|21511707 21512749|21512749|21512749|21512749|21512749|21512749 3L + 21512185 21512287 3'utr M6 FlyBase G32088.1 ACTGCCAAATCAAATGTTACACTGAAATTATGCTTCTTATCTACTGTACTGTTCCACTGACTTTTTTCTTCCGTCCATTGACTTAAGTTAGTTTACATTTATT 988 21512253 0.845403067 29 968 12105 0.98245614 2.572096768 0.129824561 0.126518219 0.242982456 988 18 2 1120 3L:21512185-21512287 8 M6 FBtr0332712|FBtr0332713|FBtr0332715|FBtr0339793|FBtr0078356|FBtr0332714 21511946|21511946|21511946|21511707|21511946|21511946 21512749|21512749|21512749|21512749|21512749|21512749 TCCGTCCA 8mer-A1 dme-miR-184-3p 3L + 21512186 21512287 3'utr M6 FlyBase G24263.1 CTGCCAAATCAAATGTTACACTGAAATTATGCTTCTTATCTACTGTACTGTTCCACTGACTTTTTTCTTCCGTCCATTGACTTAAGTTAGTTTACATTTATT 598 21512253 0.770483091 25 572 7045 0.958810069 2.321184027 0.129290618 0.352842809 0.557208238 598 33 3 838 3L:21512186-21512287 8 761 1743 FBgn0037092 152.03 9.373333333 14.24333333 5.005591002 81.18776671 53.42850456 1 1 1 0.2 dme-miR-2535b-3p 7mer-A1 CGTGAGA 3L 21522526 21522532 + 3L_21522526_21522532_+ 0.3775285 0.371237624 0.374383062 0.004448338 Cdk12 FBtr0078358 21521780 21522684 3L + 21522511 21522544 3'utr Cdk12 FlyBase G32113.1 ACTTTGCATGATGTGCGTGAGACTGAAATCAATT 23 21522528 0.859357455 4 22 130 0.962962963 1.414973348 0 0.173913043 0.296296296 23 1 0 26 3L:21522511-21522544 7 Cdk12 FBtr0078358 21521780 21522684 CGTGAGA 7mer-A1 dme-miR-2535b-3p 3L + 21522511 21522541 3'utr Cdk12 FlyBase G24281.1 ACTTTGCATGATGTGCGTGAGACTGAAATCA 8 21522528 0.81070037 3 8 43 1 1.079181246 0 0.375 0.583333333 8 0 0 12 3L:21522511-21522541 7 15.5 1744 FBgn0037093 1128.82 30.18666667 46.38666667 0.013731153 0.513471731 0.334147744 -2 -2 -2 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3L 21530510 21530516 - 3L_21530510_21530516_- 0.290826726 0.424183497 0.357505111 0.094297498 Mkrn1 FBtr0078383 21529957 21531468 3L - 21530499 21530583 3'utr Mkrn1 FlyBase G39018.1 TGTAACAATAACTTAAAAATCTCAATAATTGCATAGAATCGGGTTCAGCGATTCGAACCCATTTGTATGTGATTCTAGTTGACAA 26 21530521 0.714901183 9 19 204 0.7 0.84509804 0.033333333 0.153846154 0.266666667 26 7 2 21 3L:21530499-21530583 7 Mkrn1 FBtr0078383 21529957 21531468 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 21530491 21530533 3'utr Mkrn1 FlyBase G29462.1 ATTCGAACCCATTTGTATGTGATTCTAGTTGACAAACAAAATA 6 21530512 0.987489023 4 5 49 1 1 0.4 0.8 0.9 5 0 0 10 3L:21530491-21530533 7 6.5 1745 FBgn0029152 1179.853333 63.02 97.17333333 0.005509159 0.10314186 0.066890779 5 -4 0.5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 21530710 21530715 - 3L_21530710_21530715_- 0.958293672 0.834623466 0.896458569 0.087448037 Mkrn1 FBtr0305331|FBtr0078384|FBtr0078383 21530604|21530604|21529957 21531468|21531468|21531468 3L - 21530692 21530779 3'utr Mkrn1 FlyBase G39020.1 ACTGCAAATATGATATGTATAACATCTTTACTGTATATGAATTTTAAGTTTATACTTTCGAAATGTACCTCTTTAAAATGTTTTATTT 99 21530716 0.836772961 11 99 897 1 2.11058971 0.015503876 0.212121212 0.395348837 99 0 0 129 3L:21530692-21530779 6 Mkrn1 FBtr0078383|FBtr0078384|FBtr0305331 21529957|21530604|21530604 21531468|21531468|21531468 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L - 21530690 21530764 3'utr Mkrn1 FlyBase G29464.1 TGTATAACATCTTTACTGTATATGAATTTTAAGTTTATACTTTCGAAATGTACCTCTTTAAAATGTTTTATTTTT 53 21530716 0.859013843 7 53 493 1 1.886490725 0 0.358490566 0.558441558 53 0 0 77 3L:21530690-21530764 6 68 1746 FBgn0029152 1179.853333 63.02 97.17333333 0.057634282 1.079022533 0.699780461 1 1 1 0.2 dme-miR-14-3p 7mer-A1 AGACTGA 3L 21531075 21531081 - 3L_21531075_21531081_- 0.822752532 0.823218927 0.822985729 0.000329795 Mkrn1 FBtr0305331|FBtr0078384|FBtr0078383 21530604|21530604|21529957 21531468|21531468|21531468 3L - 21531056 21531116 3'utr Mkrn1 FlyBase G39021.1 ATTTTCAAAACTGGTGACTGTAAATTATGGCTTTCAGACTGAATTGTAAAGATAAAAATGC 102 21531084 0.707398048 9 99 751 0.976 1.785329835 0.04 0.18627451 0.336 102 2 1 122 3L:21531056-21531116 7 Mkrn1 FBtr0078383|FBtr0078384|FBtr0305331 21529957|21530604|21530604 21531468|21531468|21531468 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 21531059 21531110 3'utr Mkrn1 FlyBase G29466.1 AAAACTGGTGACTGTAAATTATGGCTTTCAGACTGAATTGTAAAGATAAAAA 87 21531084 0.636788534 11 84 633 0.947826087 1.736396502 0.07826087 0.252873563 0.434782609 87 5 1 109 3L:21531059-21531110 7 89 1747 FBgn0029152 1179.853333 63.02 97.17333333 0.075433105 1.412250079 0.915889133 3 3 3 0.2 dme-miR-2b-2-5p 6mer2-7 TGAAGA 3L 21540649 21540654 + 3L_21540649_21540654_+ 0.999999358 0.961615648 0.980807503 0.027141445 VhaM9.7-b FBtr0078369|FBtr0333454 21540394|21540394 21540698|21541215 3L + 21540633 21540664 3'utr VhaM9.7-b FlyBase G32143.1 ATCGAGTGTCTTAAAATGAAGATTGAAACCTA 5 21540643 0.634010009 4 4 33 0.8 0.602059991 0.2 0 0 5 1 0 4 3L:21540633-21540664 6 VhaM9.7-b FBtr0333454|FBtr0078369 21540394|21540394 21541215|21540698 TGAAGA 6mer2-7 dme-miR-2b-2-5p 3L + 21540636 21540670 3'utr VhaM9.7-b FlyBase G24306.1 GAGTGTCTTAAAATGAAGATTGAAACCTAAAATAA 5 21540649 0.821549564 2 4 31 0.8 0.602059991 0 0 0 5 1 0 4 3L:21540636-21540670 6 5 1748 FBgn0028663 439.5 80.42 122.6266667 0.011376564 0.062173589 0.040774165 6 0 3 0.2 dme-miR-11-3p 8mer-m1 CTGTGATG 3L 216363 216370 + 3L_216363_216370_+ 0.462242767 0.462110204 0.462176485 9.38E-05 CG16940 FBtr0072486|FBtr0072487 216108|216108 216479|216479 3L + 216317 216385 3'utr CG16940 FlyBase G26717.1 TGAACCACATTGTGGGTCCGAGCTTTATGCTTGACAAAAATTGACTCTGTGATGCTTCCTTTTTCGGTT 25 216362 0.890948911 9 21 195 0.903225806 1.447158031 0.129032258 0.24 0.387096774 25 3 0 28 3L:216317-216385 8 CG16940 FBtr0072487|FBtr0072486 216108|216108 216479|216479 CTGTGATG 8mer-m1 dme-miR-11-3p 3L + 216320 216391 3'utr CG16940 FlyBase G20203.1 ACCACATTGTGGGTCCGAGCTTTATGCTTGACAAAAATTGACTCTGTGATGCTTCCTTTTTCGGTTTGCATA 28 216361 0.968264553 12 27 221 1 1.591064607 0.102564103 0.333333333 0.538461538 27 0 0 39 3L:216320-216391 8 21 1749 FBgn0035111 907.85 30.83666667 47.24666667 0.023131575 0.681007459 0.444475801 1 2 1.5 0.2 dme-miR-283-5p 7mer-m8 TGATATT 3L 21642236 21642242 + 3L_21642236_21642242_+ 0.619351762 0.619983976 0.619667869 0.000447033 Atox1 FBtr0330117|FBtr0078426 21642160|21642106 21642599|21642599 3L + 21642193 21642282 3'utr Atox1 FlyBase G32188.1 CACGTTGCCGCTCCGAAAGCATTCGATTTGGGTCGCTGTTCAGTGATATTCATGGGATACATACAAATTTTACTCTTAACCAAATCAAAT 61 21642232 0.680270866 17 56 502 0.918918919 1.531478917 0.175675676 0.180327869 0.324324324 61 5 1 68 3L:21642193-21642282 7 Atox1 FBtr0078426|FBtr0330117 21642106|21642160 21642599|21642599 TGATATT 7mer-m8 dme-miR-283-5p 3L + 21642198 21642274 3'utr Atox1 FlyBase G24336.1 TGCCGCTCCGAAAGCATTCGATTTGGGTCGCTGTTCAGTGATATTCATGGGATACATACAAATTTTACTCTTAACCA 55 21642232 0.988571323 10 50 457 0.903614458 1.273001272 0.120481928 0.363636364 0.578313253 55 5 3 75 3L:21642198-21642274 7 45.5 1750 FBgn0052446 139.3333333 19.38666667 29.60666667 0.326555024 2.346973865 1.536816032 4 4 4 0.2 dme-miR-1012-3p 7mer-A1 TGACTAA 3L 21642532 21642538 + 3L_21642532_21642538_+ 0.458584006 0.450182924 0.454383465 0.005940475 Atox1 FBtr0330117|FBtr0078426 21642160|21642106 21642599|21642599 3L + 21642485 21642542 3'utr Atox1 FlyBase G32190.1 AATCCAACGTAGTTGCCAATAAATGATATACGCCAGTTGCCCTCTTATGACTAATCGT 12 21642522 0.990173395 4 9 88 0.6875 0.740362689 0.125 0.25 0.4375 12 4 1 11 3L:21642485-21642542 7 Atox1 FBtr0078426|FBtr0330117 21642106|21642160 21642599|21642599 TGACTAA 7mer-A1 dme-miR-1012-3p 3L + 21642496 21642552 3'utr Atox1 FlyBase G24338.1 GTTGCCAATAAATGATATACGCCAGTTGCCCTCTTATGACTAATCGTAATATTACAA 12 21642522 0.98295292 5 10 83 0.904761905 1.278753601 0.285714286 0.583333333 0.761904762 12 2 0 19 3L:21642496-21642552 7 8.5 1751 FBgn0052446 139.3333333 19.38666667 29.60666667 0.061004785 0.438445667 0.287097501 10 10 10 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 21683107 21683113 + 3L_21683107_21683113_+ 0.657751082 0.658693634 0.658222358 0.000666448 CG11248 FBtr0078430|FBtr0333967|FBtr0078431 21682915|21682915|21682915 21683231|21683231|21683231 3L + 21683060 21683127 3'utr CG11248 FlyBase G32194.1 AGATCCAACTTAGTTCAATTTATATAAATATTTATTTTGTTGTCTTTTGTGTTCGTTATCTTTATTTA 19 21683106 0.879119069 2 19 281 1 1.380211242 0 0.157894737 0.333333333 19 0 0 24 3L:21683060-21683127 7 CG11248 FBtr0078431|FBtr0333967|FBtr0078430 21682915|21682915|21682915 21683231|21683231|21683231 TGTGTTC 7mer-m8 dme-miR-317-3p 3L + 21683093 21683126 3'utr CG11248 FlyBase G24341.1 ATTTTGTTGTCTTTTGTGTTCGTTATCTTTATTT 11 21683106 0.729967988 2 11 156 1 1.204119983 0 0.272727273 0.5 11 0 0 16 3L:21683093-21683126 7 13.5 1752 FBgn0037117 323.0366667 13.05333333 20.00333333 0.041790922 1.03421859 0.674887519 1 1 1 0.2 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA 3L 21724674 21724681 - 3L_21724674_21724681_- 0.626923543 0.572813572 0.599868557 0.038261477 CG11247 FBtr0113184|FBtr0078459|FBtr0078458|FBtr0332769 21724324|21724324|21724324|21724324 21724898|21724898|21724898|21724898 3L - 21724656 21724712 3'utr CG11247 FlyBase G39103.1 TCCCAATTTTGCTGCTACCAAAAAGTATAATTTGAAGAATGTATGAGTTAGTGTTGT 8 21724682 0.977485402 7 8 54 1 1 0.1 0.125 0.3 8 0 0 10 3L:21724656-21724712 8 CG11247 FBtr0332769|FBtr0078458|FBtr0078459|FBtr0113184 21724324|21724324|21724324|21724324 21724898|21724898|21724898|21724898 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p 3L - 21724659 21724721 3'utr CG11247 FlyBase G29527.1 TACCCTTAATCCCAATTTTGCTGCTACCAAAAAGTATAATTTGAAGAATGTATGAGTTAGTGT 7 21724704 0.96920563 4 7 48 1 1.041392685 0.272727273 0.285714286 0.545454545 7 0 0 11 3L:21724659-21724721 8 3 1753 FBgn0037120 533.7966667 23.84666667 36.66 0.005620118 0.125803746 0.081833061 1 23 12 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 21824146 21824151 + 3L_21824146_21824151_+ 0.954036908 0.933655493 0.943846201 0.014411826 CG7407 FBtr0078440|FBtr0078440|FBtr0078440 21824099|21824099|21824099 21824571|21824571|21824571 3L + 21824034 21824244 stop_codon CG7407 FlyBase G32205.1 GGAATTGAACCTCCAGGACCGAATAAGCGACCAGGATCTCAAGCAGCAGGTGCGGCTCTATCGCTGAAGTGGCGCCGAGCCTGGGCTCACCCTACCTGAATGTACAGACTTGTGTGATCTATTAGTTTAATGTTTAAAATTCCAAGATTTGGTGTTGCCTCATACGGTCCACTAAGTGCGGGCAAGTCTTTAGTCAGAGAGCTATCTCATC 258 21824145 0.999997264 26 248 2332 0.963815789 1.767897616 0.217105263 0.158914729 0.286184211 258 7 4 293 3L:21824034-21824244 6 CG7407 FBtr0078440|FBtr0078440|FBtr0078440 21824099|21824099|21824099 21824571|21824571|21824571 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 21824037 21824169 stop_codon CG7407 FlyBase G24348.1 ATTGAACCTCCAGGACCGAATAAGCGACCAGGATCTCAAGCAGCAGGTGCGGCTCTATCGCTGAAGTGGCGCCGAGCCTGGGCTCACCCTACCTGAATGTACAGACTTGTGTGATCTATTAGTTTAATGTTTA 129 21824145 0.988546648 16 121 1145 0.938547486 1.924279286 0.173184358 0.286821705 0.48603352 129 10 1 168 3L:21824037-21824169 6 139.5 1754 FBgn0037134 80.66666667 9.62 14.74333333 1.729338843 14.5010395 9.461903685 1 1 1 0.2 dme-miR-263a-5p 7mer-m1 TGCCATT 3L 21827008 21827014 + 3L_21827008_21827014_+ 0.763184922 0.76558666 0.764385791 0.001698329 CG7414 FBtr0303247|FBtr0303245 21826936|21826936 21827856|21827856 3L + 21826956 21827031 3'utr CG7414 FlyBase G32220.1 TTGTCAGCTCCTAGGCTCCACTCACCTCTTTCACACACATTTTGTATTAGCATGCCATTAGGATTAGGGATTGCGC 23 21827013 0.985561845 11 21 171 0.923076923 1.079181246 0.192307692 0.086956522 0.192307692 23 1 1 24 3L:21826956-21827031 7 CG7414 FBtr0303247|FBtr0303245 21826936|21826936 21827856|21827856 TGCCATT 7mer-m1 dme-miR-263a-5p 3L + 21826983 21827025 3'utr CG7414 FlyBase G24361.1 CTTTCACACACATTTTGTATTAGCATGCCATTAGGATTAGGGA 7 21827007 0.981728126 5 6 46 0.9 0.954242509 0.1 0.285714286 0.5 7 1 0 9 3L:21826983-21827025 7 14 1755 FBgn0037135 1558.176667 79.32666667 121.5733333 0.008984861 0.176485419 0.115156833 -5 1 -2 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3L 21827598 21827604 + 3L_21827598_21827604_+ 0.415156633 0.312575542 0.363866087 0.072535791 CG7414 FBtr0303247|FBtr0303245|FBtr0078441|FBtr0303246 21826936|21826936|21827526|21827526 21827856|21827856|21827856|21827856 3L + 21827549 21827636 3'utr CG7414 FlyBase G32225.1 GATGACGACGGCGGCGAGAAGGCTGAGGGATGCGAGGAGTAATTGCTCTTGTGATTGTGATACAGCACCTCTTCTCAGCTCCACTCCA 119 21827603 0.988126831 14 110 1000 0.912162162 1.528273777 0.121621622 0.193277311 0.351351351 119 10 3 135 3L:21827549-21827636 7 CG7414 FBtr0078441|FBtr0303246|FBtr0303247|FBtr0303245 21827526|21827526|21826936|21826936 21827856|21827856|21827856|21827856 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 21827514 21827634 3'utr CG7414 FlyBase G24365.1 AGCAGTCTGCCTAGGAGGACGTTAATGGCGTTGACGATGACGACGGCGGCGAGAAGGCTGAGGGATGCGAGGAGTAATTGCTCTTGTGATTGTGATACAGCACCTCTTCTCAGCTCCACTC 64 21827603 0.941208444 14 62 477 0.98019802 1.995635195 0.287128713 0.4375 0.643564356 64 2 0 99 3L:21827514-21827634 7 80 1756 FBgn0037135 1558.176667 79.32666667 121.5733333 0.05134206 1.008488108 0.658039044 -5 -5 -5 0.2 dme-miR-965-3p 6mer3-8 TACGCT 3L 21827674 21827679 + 3L_21827674_21827679_+ 0.943860391 0.997791559 0.970825975 0.038135117 CG7414 FBtr0303247|FBtr0303245|FBtr0078441|FBtr0303246 21826936|21826936|21827526|21827526 21827856|21827856|21827856|21827856 3L + 21827643 21827691 3'utr CG7414 FlyBase G32226.1 TCACCTCCTGTTCGTCCCCTTCCTGCTGTTTTACGCTCAGTTTGTGGCC 15 21827673 0.736859488 6 12 143 0.85 1.230448921 0.05 0.333333333 0.5 15 3 0 17 3L:21827643-21827691 6 CG7414 FBtr0078441|FBtr0303246|FBtr0303247|FBtr0303245 21827526|21827526|21826936|21826936 21827856|21827856|21827856|21827856 TACGCT 6mer3-8 dme-miR-965-3p 3L + 21827643 21827692 3'utr CG7414 FlyBase G24366.1 TCACCTCCTGTTCGTCCCCTTCCTGCTGTTTTACGCTCAGTTTGTGGCCC 9 21827673 0.722351232 5 8 69 1 1.113943352 0.153846154 0.333333333 0.538461538 9 0 0 13 3L:21827643-21827692 6 8 1757 FBgn0037135 1558.176667 79.32666667 121.5733333 0.005134206 0.100848811 0.065803904 1 1 1 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3L 21827734 21827740 + 3L_21827734_21827740_+ 0.520999395 0.521157036 0.521078216 0.00011144 CG7414 FBtr0303247|FBtr0303245|FBtr0078441|FBtr0303246 21826936|21826936|21827526|21827526 21827856|21827856|21827856|21827856 3L + 21827711 21827764 3'utr CG7414 FlyBase G32227.1 AAGTTAAAACATTTTTCTACTATTGTGATTTCCCAACTAATTTCGGCAAAACGT 194 21827740 0.734981933 9 190 1861 0.984 2.089905111 0.004 0.25257732 0.42 194 3 1 246 3L:21827711-21827764 7 CG7414 FBtr0078441|FBtr0303246|FBtr0303247|FBtr0303245 21827526|21827526|21826936|21826936 21827856|21827856|21827856|21827856 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 21827712 21827777 3'utr CG7414 FlyBase G24367.1 AGTTAAAACATTTTTCTACTATTGTGATTTCCCAACTAATTTCGGCAAAACGTACAGTAACTCCCG 138 21827740 0.729529215 8 131 1324 0.955 1.37794338 0.015 0.362318841 0.56 138 2 7 191 3L:21827712-21827777 7 163.5 1758 FBgn0037135 1558.176667 79.32666667 121.5733333 0.104930335 2.061097571 1.344867295 -6 -6 -6 0.2 dme-miR-968-5p 6mer3-8 ACTACT 3L 21837410 21837415 - 3L_21837410_21837415_- 0.92646733 0.999993852 0.963230591 0.051991157 P5CDh1 FBtr0332813|FBtr0303031|FBtr0078446|FBtr0078447|FBtr0078445 21836663|21836663|21836663|21836663|21836663 21837488|21837488|21837488|21837488|21837488 3L - 21837410 21837506 stop_codon P5CDh1 FlyBase G39124.1 CCATACATGTGCGAGTAAGCTGGCCGACAGAAGATGCGCAAGGGGAATGGGATGAGCAAAAGTAGTGAAAACCAGACAGGAATCTCATATAACTACT 19 21837419 0.917950468 7 16 58 0.863636364 1.278753601 0.181818182 0.105263158 0.227272727 19 3 0 19 3L:21837410-21837506 5 P5CDh1 FBtr0078445|FBtr0078446|FBtr0078447|FBtr0332813|FBtr0303031 21836663|21836663|21836663|21836663|21836663 21837488|21837488|21837488|21837488|21837488 ACTACT 6mer3-8 dme-miR-968-5p 3L - 21837390 21837471 3'utr P5CDh1 FlyBase G29544.1 GCGCAAGGGGAATGGGATGAGCAAAAGTAGTGAAAACCAGACAGGAATCTCATATAACTACTAACTATATAAACATACTTAA 9 21837418 0.937811203 7 8 30 1 1.113943352 0.307692308 0.333333333 0.538461538 9 0 0 13 3L:21837390-21837471 6 4 1759 FBgn0037138 509.79 22.77333333 34.87 0.007846368 0.175644028 0.114711787 4 3 3.5 0.2 dme-miR-965-3p 6mer2-7 ACGCTT 3L 2189274 2189279 - 3L_2189274_2189279_- 0.814483858 0.999997151 0.907240504 0.131177712 CG5707 FBtr0308230|FBtr0308231|FBtr0072912 2189158|2189158|2189158 2189387|2189387|2189387 3L - 2189265 2189359 3'utr CG5707 FlyBase G33645.1 AGCAGCGCGATGCGAAAATTTCCGATGCGAAACAAGATATTGATTTCATTATGCCGACGTGATGCTTTCTTCAAGCCTTAACGCTTTAGAGTAAT 38 2189293 0.836572325 12 36 296 0.9375 1.653212514 0.208333333 0.236842105 0.395833333 38 3 0 45 3L:2189265-2189359 6 CG5707 FBtr0072912|FBtr0308230|FBtr0308231 2189158|2189158|2189158 2189387|2189387|2189387 ACGCTT 6mer2-7 dme-miR-965-3p 3L - 2189248 2189328 3'utr CG5707 FlyBase G25441.1 ACAAGATATTGATTTCATTATGCCGACGTGATGCTTTCTTCAAGCCTTAACGCTTTAGAGTAATAATATAGACAATTTTAT 23 2189298 0.986701432 10 22 190 0.923076923 1.380211242 0.115384615 0.130434783 0.230769231 23 2 0 24 3L:2189248-2189328 6 4 1760 FBgn0026593 25 2.016666667 3.073333333 0.16 1.983471074 1.301518438 14 19 16.5 0.2 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 21923529 21923536 + 3L_21923529_21923536_+ 0.482405659 0.502605672 0.492505665 0.014283557 mub FBtr0301364|FBtr0111017|FBtr0304983|FBtr0304980|FBtr0304984 21923187|21923187|21923187|21923187|21923187 21924114|21932702|21924114|21924114|21924114 3L + 21923504 21923546 3'utr mub FlyBase G32253.1 AGTCACACTTAGATTAGCCGCATAGGGCAGCTAGAGATTTGAA 44 21923526 0.970701398 3 42 174 0.92 1.662757832 0.44 0.113636364 0.22 44 4 0 46 3L:21923504-21923546 8 mub FBtr0304980|FBtr0304984|FBtr0111017|FBtr0304983|FBtr0301364 21923187|21923187|21923187|21923187|21923187 21924114|21924114|21932702|21924114|21924114 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L + 21923510 21923548 3'utr mub FlyBase G24384.1 ACTTAGATTAGCCGCATAGGGCAGCTAGAGATTTGAATA 19 21923526 0.962822412 3 18 82 1 1.505149978 0.375 0.368421053 0.625 19 0 0 32 3L:21923510-21923548 8 31 1761 FBgn0262737 2368.09 79.81333333 123.0033333 0.013090719 0.388406281 0.25202569 3 3 3 0.2 dme-miR-14-3p 7mer-A1 AGACTGA 3L 21926166 21926172 + 3L_21926166_21926172_+ 0.820945889 0.821910361 0.821428125 0.000682004 mub FBtr0346820|FBtr0078468|FBtr0333222|FBtr0332736|FBtr0304981|FBtr0304982|FBtr0078470|FBtr0111017 21925263|21925263|21925263|21925263|21925263|21925263|21925263|21923187 21932702|21926699|21932702|21926225|21926699|21926699|21932702|21932702 3L + 21926125 21926199 3'utr mub FlyBase G32257.1 AATTGTTATCGAAATTGTATTTGTGATTTTTGAATATGTTTAGACTGATGTGCAAAATTGATTCTGTTTATTAAT 74 21926164 0.72437265 13 73 763 0.99 1.995635195 0.45 0.297297297 0.48 74 1 0 99 3L:21926125-21926199 7 mub FBtr0111017|FBtr0304982|FBtr0346820|FBtr0304981|FBtr0078468|FBtr0078470|FBtr0333222|FBtr0332736 21923187|21925263|21925263|21925263|21925263|21925263|21925263|21925263 21932702|21926699|21932702|21926699|21926699|21932702|21932702|21926225 AGACTGA 7mer-A1 dme-miR-14-3p 3L + 21926127 21926200 3'utr mub FlyBase G24387.1 TTGTTATCGAAATTGTATTTGTGATTTTTGAATATGTTTAGACTGATGTGCAAAATTGATTCTGTTTATTAATT 58 21926164 0.720590759 13 53 594 0.884057971 1.785329835 0.608695652 0.189655172 0.31884058 58 8 0 61 3L:21926127-21926200 7 35.5 1762 FBgn0262737 2368.09 79.81333333 123.0033333 0.014990984 0.444787838 0.288610065 2 2 2 0.2 dme-miR-283-5p 8mer-A1 TGATATTA 3L 21949406 21949413 + 3L_21949406_21949413_+ 0.442241023 0.322667655 0.382454339 0.084551091 CG14562 FBtr0078472|FBtr0334088 21949341|21949341 21949452|21949866 3L + 21949388 21949421 3'utr CG14562 FlyBase G32275.1 ATTGAAAATTGATAAGATTGATATTAACGTAGCA 14 21949403 0.7541915 3 11 110 0.857142857 1.079181246 0.142857143 0 0 14 2 0 12 3L:21949388-21949421 8 CG14562 FBtr0334088|FBtr0078472 21949341|21949341 21949866|21949452 TGATATTA 8mer-A1 dme-miR-283-5p 3L + 21949388 21949421 3'utr CG14562 FlyBase G24399.1 ATTGAAAATTGATAAGATTGATATTAACGTAGCA 13 21949405 0.742074261 3 13 91 1 1.397940009 0.12 0.538461538 0.76 13 0 0 25 3L:21949388-21949421 8 13.5 1763 FBgn0037142 391.14 8.676666667 13.24 0.034514496 1.555897042 1.019637462 3 1 2 0.2 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 3L 22066799 22066805 + 3L_22066799_22066805_+ 0.788173898 0.781270344 0.784722121 0.004881582 CG14561 FBtr0078480|FBtr0334111 22066716|22066716 22066967|22067216 3L + 22066714 22066833 stop_codon CG14561 FlyBase G32292.1 CTAGTGACCGCAGTCCAGCCTTCCCAACCAAAGCCATGGAGCCCTCGCTCAGACTGCCATCGATGTTCTAGAATAAGTTACCATTTACCTGAATGTATTGTTCACACCCAGCGGTCAGCA 128 22066797 0.985488387 14 123 1012 0.96835443 1.582631439 0.46835443 0.1796875 0.335443038 128 2 3 153 3L:22066714-22066833 7 CG14561 FBtr0334111|FBtr0078480 22066716|22066716 22067216|22066967 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3L + 22066745 22066827 3'utr CG14561 FlyBase G24408.1 AGCCATGGAGCCCTCGCTCAGACTGCCATCGATGTTCTAGAATAAGTTACCATTTACCTGAATGTATTGTTCACACCCAGCGG 110 22066797 0.964249231 10 101 852 0.907407407 1.264227348 0.50617284 0.327272727 0.543209877 110 8 7 147 3L:22066745-22066827 7 108 1764 FBgn0037149 161.3333333 18.83333333 28.89 0.669421488 5.734513274 3.738317757 2 2 2 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 3L 22075151 22075156 - 3L_22075151_22075156_- 0.999999578 0.999663608 0.999831593 0.000237588 CG7130 FBtr0078484 22075054 22075247 3L - 22075117 22075220 3'utr CG7130 FlyBase G39167.1 AATCTCGGGTACCTAGCGTTCTTCGCTGAATAGTCTTTAAGATTAATTTATAGGAACTTAATTATTGACTGTTTATCTAATGAATCCTGCGTTACTTATTGATT 73 22075158 0.686629901 23 69 696 0.952941176 1.306425028 0.105882353 0.150684932 0.270588235 73 1 3 81 3L:22075117-22075220 6 CG7130 FBtr0078484 22075054 22075247 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 22075113 22075172 3'utr CG7130 FlyBase G29575.1 TATAGGAACTTAATTATTGACTGTTTATCTAATGAATCCTGCGTTACTTATTGATTAATT 50 22075157 0.710011617 13 49 471 0.959459459 1.851258349 0.094594595 0.38 0.581081081 50 3 0 71 3L:22075113-22075172 6 39 1765 FBgn0037151 176 32.25666667 49.12666667 0.221590909 1.209052392 0.793866196 2 1 1.5 0.2 dme-miR-92b-3p 7mer-A1 TGCAATA 3L 22257836 22257842 - 3L_22257836_22257842_- 0.781626744 0.781161709 0.781394227 0.000328805 Rich FBtr0078512 22257747 22258138 3L - 22257823 22257902 3'utr Rich FlyBase G39171.1 AACCGTAAAACCGTATGAAGCATACGCAACGTAATCCATAATTTAGTAGATGAAATTTGCTGCAATATTTGTTAATTAAA 15 22257846 0.984044994 9 15 129 1 1.230448921 0.176470588 0.066666667 0.176470588 15 0 0 17 3L:22257823-22257902 7 Rich FBtr0078512 22257747 22258138 TGCAATA 7mer-A1 dme-miR-92b-3p 3L - 22257824 22257858 3'utr Rich FlyBase G29578.1 AGTAGATGAAATTTGCTGCAATATTTGTTAATTAA 6 22257846 0.786487377 3 6 57 1 1.113943352 0 0.5 0.769230769 6 0 0 13 3L:22257824-22257858 7 8 1766 FBgn0028500 540.74 13.42666667 20.61333333 0.014794541 0.595829196 0.388098318 4 4 4 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3L 22265808 22265814 - 3L_22265808_22265814_- 0.520289816 0.514273391 0.517281604 0.004254237 CG11523 FBtr0078511 22265804 22266077 3L - 22265799 22265866 3'utr CG11523 FlyBase G39183.1 AAATGTCGCTCCAGATCCGCGTTAGACCTTAAGACGTTTCAAGAATAAAGATTGTGATTGCAACTCTA 173 22265815 0.650947509 11 163 988 0.947136564 1.55428721 0.061674009 0.231213873 0.414096916 173 7 5 215 3L:22265799-22265866 7 CG11523 FBtr0078511 22265804 22266077 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 22265799 22265880 3'utr CG11523 FlyBase G29587.1 CTTGCATAGCAAACAAATGTCGCTCCAGATCCGCGTTAGACCTTAAGACGTTTCAAGAATAAAGATTGTGATTGCAACTCTA 118 22265815 0.826435357 9 114 669 0.97826087 1.77815125 0.076086957 0.43220339 0.635869565 118 2 2 180 3L:22265799-22265880 7 139 1767 FBgn0037156 234.9133333 34.43333333 53.07666667 0.59170758 4.03678606 2.618853231 1 1 1 0.2 dme-miR-2535b-3p 7mer-m1 CGTGAGT 3L 22265915 22265921 - 3L_22265915_22265921_- 0.716182996 0.514711995 0.615447495 0.14246151 CG11523 FBtr0078511 22265804 22266077 3L - 22265875 22265997 3'utr CG11523 FlyBase G39184.1 ATTTTTAATAGCAGAGCTTGAGCTCCGACTTCCTACATATACAAAATTGTGTGTTTGTGCCGCAAAAGTATTTCCGCGTGAGTTGGTCTTGCACTTCTCAATTCACCACATCCTTTCCTTGCA 30 22265926 0.982738753 17 28 211 0.944444444 1.531478917 0.111111111 0.166666667 0.305555556 30 2 0 34 3L:22265875-22265997 7 CG11523 FBtr0078511 22265804 22266077 CGTGAGT 7mer-m1 dme-miR-2535b-3p 3L - 22265911 22265940 3'utr CG11523 FlyBase G29588.1 TGCCGCAAAAGTATTTCCGCGTGAGTTGGT 5 22265925 0.733806221 2 4 26 1 0.954242509 0.111111111 0.4 0.666666667 5 0 0 9 3L:22265911-22265940 7 7 1768 FBgn0037156 234.9133333 34.43333333 53.07666667 0.029798223 0.203291384 0.131884695 5 4 4.5 0.2 dme-bantam-3p 6mer3-8 TGATCT 3L 22293399 22293404 - 3L_22293399_22293404_- 0.90412828 0.970799455 0.937463868 0.047143658 Ten-m FBtr0078509 22293042 22295587 3L - 22293047 22293427 3'utr Ten-m FlyBase G39206.1 GGTCCTCTGTTCTTAAAATACTTTGATCTGTACATTTTCAGGATGGGGCAAAAGCTTAACCTACTTAATTAGTTGAGATCATGATTAGGCATATTAACTGACTAACGAAAAAGGCCAGTCCGTTAAGGCAGTTTGAGCATACATAAATTGCGAACAATAATTGTATTTAATGTACGAAATTGTCTTTAAAATATATGGATACCGAGAGAAGTGCAGAGGGTATAGGCTATAAATTACAAATCGAATGCAGACAACAAAGACAATTGTACACAAAGAAATAATTATGGCAAGCCGATATACATACATGATAAAACATCCATATAAATATATATAATAACTAATAATATTACGAGTAAAAAGCGATTTCAATAAAAATGAAAA 175 22293405 0.925795772 47 167 966 0.962264151 1.610660163 0.179245283 0.16 0.306603774 175 4 4 204 3L:22293047-22293427 6 Ten-m FBtr0078509 22293042 22295587 TGATCT 6mer3-8 dme-bantam-3p 3L - 22293285 22293485 3'utr Ten-m FlyBase G29611.1 AGATACCAAGCGGATGCCGTTGTCGAGCTCGACTGTGCTTCATCTCGTACATACCCCAGGTCCTCTGTTCTTAAAATACTTTGATCTGTACATTTTCAGGATGGGGCAAAAGCTTAACCTACTTAATTAGTTGAGATCATGATTAGGCATATTAACTGACTAACGAAAAAGGCCAGTCCGTTAAGGCAGTTTGAGCATACA 61 22293405 0.981324038 28 57 412 0.956043956 1.638489257 0.065934066 0.327868852 0.549450549 61 3 1 87 3L:22293285-22293485 6 22.5 1769 FBgn0004449 644.2766667 6.713333333 10.31666667 0.034922885 3.351539225 2.180936995 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 22294462 22294468 - 3L_22294462_22294468_- 0.532492663 0.519717288 0.526104976 0.009033572 Ten-m FBtr0306107|FBtr0306107|FBtr0306107|FBtr0330159|FBtr0330159|FBtr0330159|FBtr0078509|FBtr0078509|FBtr0078509 22293982|22293982|22293982|22293982|22293982|22293982|22293042|22293042|22293042 22295587|22295587|22295587|22295431|22295431|22295431|22295587|22295587|22295587 3L - 22294384 22295099 3'utr Ten-m FlyBase G39208.2 ACGGTGCGTATTATTTAGATTGGTCCATTAACCGATTTTGGTCGAGACAAGAGTGCATAGATCAAACCAATACGAACGGAATGATCTCGCTTGTTTCGGAAATTGGAGTTAGGACAAACACAGGCCAACAAGCCAGTTGCATTACGATGTCAAACGATGAGTATTACACAGCAAATTATGCATACGATAAGTACAGATGTTAAACTACGAAATGAATAAATGTAAAAAGATTAAAGTTCTGCATAGTAGCTCCCTAGTCTTTGGTCCAAACCTGGACTCTTTCCAACACAGCCCACTCTCAAATGGCAACAGAAATGTTGATCGCTGCTTAACCTACTTCTTCATAATTGCTCTGTGTATATACGAACGAATACTTTTCAAGCCTCCACTGACGAAAAAGCGCGTATCCTTTATCCTAACACTCATTTTAGCGAAATAGGTCTCTAAGCCGAATGCTCGAATTTAAATTTAATAGACGCGTCTACCTAATTTGGATAGCCAAGAATCAAAAGGAATTTTTATCAGTCCCCTTTCAATGCAATACAATACTCTAACGACTCTTTTCACTCATTTTATAATGTTAGCTGTTGAATTTATTCAAAGGAAAACGCATTAAAAACTTTTTACAAATTGTGATATATATTTCTAAACATTTCATTTGACAACTTGAAGTGTAGCGAAGAAAAACTCGAATTAACTCAAATCGAACCGAAAGT 1837 22294469 0.972993216 142 1734 16945 0.945722171 1.721958503 0.072217111 0.151333696 0.282888684 1837 80 38 2056 3L:22294384-22295099 7 Ten-m FBtr0078509|FBtr0078509|FBtr0078509|FBtr0330159|FBtr0330159|FBtr0330159|FBtr0306107|FBtr0306107|FBtr0306107 22293042|22293042|22293042|22293982|22293982|22293982|22293982|22293982|22293982 22295587|22295587|22295587|22295431|22295431|22295431|22295587|22295587|22295587 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 22294385 22294866 3'utr Ten-m FlyBase G29615.1 AAGTTCTGCATAGTAGCTCCCTAGTCTTTGGTCCAAACCTGGACTCTTTCCAACACAGCCCACTCTCAAATGGCAACAGAAATGTTGATCGCTGCTTAACCTACTTCTTCATAATTGCTCTGTGTATATACGAACGAATACTTTTCAAGCCTCCACTGACGAAAAAGCGCGTATCCTTTATCCTAACACTCATTTTAGCGAAATAGGTCTCTAAGCCGAATGCTCGAATTTAAATTTAATAGACGCGTCTACCTAATTTGGATAGCCAAGAATCAAAAGGAATTTTTATCAGTCCCCTTTCAATGCAATACAATACTCTAACGACTCTTTTCACTCATTTTATAATGTTAGCTGTTGAATTTATTCAAAGGAAAACGCATTAAAAACTTTTTACAAATTGTGATATATATTTCTAAACATTTCATTTGACAACTTGAAGTGTAGCGAAGAAAAACTCGAATTAACTCAAATCGAACCGAAAG 1034 22294469 0.971539297 102 973 9482 0.942743009 1.808640573 0.05792277 0.34622824 0.549933422 1034 65 21 1416 3L:22294385-22294866 7 817.5 1770 FBgn0004449 644.2766667 6.713333333 10.31666667 1.268864825 121.7725919 79.24071082 1 1 1 0.2 dme-miR-970-3p 7mer-m8 TCTTATG 3L 22295238 22295244 - 3L_22295238_22295244_- 0.65626668 0.65894113 0.657603905 0.001891086 Ten-m FBtr0306107|FBtr0330159|FBtr0078509 22293982|22293982|22293042 22295587|22295431|22295587 3L - 22295192 22295351 3'utr Ten-m FlyBase G39210.1 AAAAACAAAGGAAAAGCAAGCATTGAACACACTAATTAATATAAACTTTAATCATGCTTAAAGTTTAGTATTAGCCACAACGCAACCCTCGAATAACCGAAGAAACTTCTTATGTGTACACTGGAACAGAAATATGTATGTTGATGTTGAGTTTAGGCGT 113 22295245 0.979799473 20 80 548 0.73015873 1.185636577 0.23015873 0.097345133 0.19047619 113 29 5 92 3L:22295192-22295351 7 Ten-m FBtr0078509|FBtr0330159|FBtr0306107 22293042|22293982|22293982 22295587|22295431|22295587 TCTTATG 7mer-m8 dme-miR-970-3p 3L - 22295047 22295302 3'utr Ten-m FlyBase G29618.1 AATCATGCTTAAAGTTTAGTATTAGCCACAACGCAACCCTCGAATAACCGAAGAAACTTCTTATGTGTACACTGGAACAGAAATATGTATGTTGATGTTGAGTTTAGGCGTATGTTTAGTCCATGTGTGTAATGTTAAATGTAATTTTTTAAATCAGAATCAGTGTCCCCACGGGCAATCAGCTTGCAATGGCATTTTACGCCACGGTGCGTATTATTTAGATTGGTCCATTAACCGATTTTGGTCGAGACAAGAG 82 22295244 0.973551237 36 75 469 0.893442623 1.736396502 0.114754098 0.317073171 0.540983607 82 12 1 109 3L:22295047-22295302 7 39 1771 FBgn0004449 644.2766667 6.713333333 10.31666667 0.060533001 5.809334657 3.780290792 1 0 0.5 0.2 dme-miR-13b-2-5p 7mer-A1 TTGACGA 3L 22295445 22295451 - 3L_22295445_22295451_- 0.625784947 0.782061073 0.70392301 0.110503961 Ten-m FBtr0306107|FBtr0078509 22293982|22293042 22295587|22295587 3L - 22295402 22295607 stop_codon Ten-m FlyBase G39211.1 TCGGCGAGCTGAGTGCGTGAGTGGAGGCATATAGAGAGAAGCTGGTGGCGGAGACGAAGCCAGAGGAGAGTGACATGACCGACGAAGAATACGGTGACCAGGAGGACTACCTAATTGCCGTGGGCAAAATGGAGCCAAGGGACAGCAGTGAGGCACTTGACGAGCAGATTTTGTAATTAGGTGAAATGCGCAACAGCGACCACAAG 157 22295459 0.912616298 27 153 495 0.968586387 2.267171728 0.298429319 0.159235669 0.308900524 157 6 0 185 3L:22295402-22295607 7 Ten-m FBtr0078509|FBtr0306107 22293042|22293982 22295587|22295587 TTGACGA 7mer-A1 dme-miR-13b-2-5p 3L - 22295406 22295604 stop_codon Ten-m FlyBase G29620.1 GCGAGCTGAGTGCGTGAGTGGAGGCATATAGAGAGAAGCTGGTGGCGGAGACGAAGCCAGAGGAGAGTGACATGACCGACGAAGAATACGGTGACCAGGAGGACTACCTAATTGCCGTGGGCAAAATGGAGCCAAGGGACAGCAGTGAGGCACTTGACGAGCAGATTTTGTAATTAGGTGAAATGCGCAACAGCGACCA 111 22295439 0.930338078 21 103 388 0.928571429 1.926856709 0.274725275 0.477477477 0.681318681 111 12 1 169 3L:22295406-22295604 7 56.5 1772 FBgn0004449 644.2766667 6.713333333 10.31666667 0.087695245 8.416087388 5.476575121 8 -12 -2 0.2 dme-miR-283-5p 8mer-m1 TGATATTT 3L 225558 225565 + 3L_225558_225565_+ 0.341479191 0.371516258 0.356497725 0.021239437 CG33229 FBtr0072499|FBtr0345592 224756|224756 225605|225605 3L + 225444 225577 3'utr CG33229 FlyBase G26725.1 ACGGTTCATATTGAATCACTAGCGCTAGAAAACGGGCAATATTGCAAAGTAAACGAGTGAAAGTCGAAAACCCAACTATTAACTGTAAATGTACTTAAAGTAAGCATACAGAACTGATATTTGATAAAACCTAA 296 225533 0.975595691 19 279 1766 0.940860215 2.06694679 0.129032258 0.202702703 0.365591398 296 20 2 350 3L:225444-225577 8 CG33229 FBtr0345592|FBtr0072499 224756|224756 225605|225605 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 225446 225582 3'utr CG33229 FlyBase G20211.1 GGTTCATATTGAATCACTAGCGCTAGAAAACGGGCAATATTGCAAAGTAAACGAGTGAAAGTCGAAAACCCAACTATTAACTGTAAATGTACTTAAAGTAAGCATACAGAACTGATATTTGATAAAACCTAAAATAA 212 225533 0.973680409 18 201 1220 0.942073171 1.790988475 0.057926829 0.386792453 0.603658537 212 15 4 309 3L:225446-225582 8 156 1773 FBgn0053229 390.9566667 32.02 49 0.399021204 4.871955028 3.183673469 25 25 25 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 2259195 2259201 - 3L_2259195_2259201_- 0.771923505 0.765354194 0.768638849 0.004645197 oxt FBtr0072904|FBtr0072904|FBtr0072904 2258837|2258837|2258837 2259328|2259328|2259328 3L - 2259133 2259220 3'utr oxt FlyBase G33658.1 ATGTTTTCGTATAGATTGTTGTGATAATGTGAACTTTTAAGCGCCATTTTGACCGGAAGCGGAACTCCGCCGCTCCAATTGTATTTGA 61 2259204 0.98681453 15 56 527 0.927536232 1.329058719 0.31884058 0.098360656 0.202898551 61 3 2 64 3L:2259133-2259220 7 oxt FBtr0072904|FBtr0072904|FBtr0072904 2258837|2258837|2258837 2259328|2259328|2259328 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 2259151 2259223 3'utr oxt FlyBase G25452.1 TCGATGTTTTCGTATAGATTGTTGTGATAATGTGAACTTTTAAGCGCCATTTTGACCGGAAGCGGAACTCCGC 30 2259204 0.987907542 10 28 248 0.93877551 1.662757832 0.346938776 0.4 0.632653061 30 3 0 46 3L:2259151-2259223 7 30 1774 FBgn0015360 414.5533333 14.81333333 22.68333333 0.072367046 2.02520252 1.322556943 3 3 3 0.2 dme-miR-12-5p 7mer-m8 AATACTC 3L 2259281 2259287 - 3L_2259281_2259287_- 0.663016713 0.661784266 0.66240049 0.000871438 oxt FBtr0072904 2258837 2259328 3L - 2259255 2259296 3'utr oxt FlyBase G33659.1 TCTAGTGTAAATACTCGCCAAGATTTAGATGTCGAACCGCAA 10 2259285 0.966964605 2 10 57 1 1 0 0 0 10 0 0 10 3L:2259255-2259296 7 oxt FBtr0072904 2258837 2259328 AATACTC 7mer-m8 dme-miR-12-5p 3L - 2259248 2259295 3'utr oxt FlyBase G25453.1 CTAGTGTAAATACTCGCCAAGATTTAGATGTCGAACCGCAATTAACGA 16 2259285 0.958329289 2 15 73 1 1.380211242 0 0.25 0.5 16 0 0 24 3L:2259248-2259295 7 12.5 1775 FBgn0015360 414.5533333 14.81333333 22.68333333 0.030152936 0.843834383 0.551065393 -2 -2 -2 0.2 dme-miR-277-3p 7mer-m8 TGCATTT 3L 22714513 22714519 - 3L_22714513_22714519_- 0.61154016 0.617528034 0.614534097 0.004234014 ArfGAP3 FBtr0330174|FBtr0330173|FBtr0330175|FBtr0078540|FBtr0078539|FBtr0113186|FBtr0331775 22714406|22714406|22714406|22714406|22714311|22714406|22714406 22714943|22714943|22714943|22714943|22714943|22714943|22714943 3L - 22714491 22714529 3'utr ArfGAP3 FlyBase G39308.1 AATTACAATTTGCATTTCGGCTGGGCAGCTTTTAATTTT 5 22714520 0.983505365 2 5 39 1 0.84509804 0.142857143 0.2 0.428571429 5 0 0 7 3L:22714491-22714529 7 ArfGAP3 FBtr0078540|FBtr0330175|FBtr0330173|FBtr0330174|FBtr0331775|FBtr0113186|FBtr0078539 22714406|22714406|22714406|22714406|22714406|22714406|22714311 22714943|22714943|22714943|22714943|22714943|22714943|22714943 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 22714488 22714536 3'utr ArfGAP3 FlyBase G29691.1 GTTTTGAAATTACAATTTGCATTTCGGCTGGGCAGCTTTTAATTTTTTC 6 22714519 0.963016922 4 6 57 1 0.954242509 0.111111111 0.333333333 0.555555556 6 0 0 9 3L:22714488-22714536 7 4.5 1776 FBgn0037182 511.4866667 25.40666667 39.02333333 0.008797883 0.177118866 0.115315623 1 0 0.5 0.2 dme-miR-1007-3p 7mer-m8 TGAGCTT 3L 22739004 22739010 - 3L_22739004_22739010_- 0.562065698 0.537329563 0.54969763 0.017491064 l(3)04053 FBtr0078535 22738600 22739100 3L - 22738958 22739046 3'utr l(3)04053 FlyBase G39330.1 TTTTCTGTGTAAACACTGTATCCCACGACTTCGCATTGAGCTTGTTTTTAGATGACCCCGCAAACATTTTATGTTTCCGTATTATCTGT 12 22739010 0.985792133 4 11 103 1 1.146128036 0.071428571 0.166666667 0.285714286 12 0 0 14 3L:22738958-22739046 7 l(3)04053 FBtr0078535 22738600 22739100 TGAGCTT 7mer-m8 dme-miR-1007-3p 3L - 22738993 22739049 3'utr l(3)04053 FlyBase G29707.1 TTGTTTTCTGTGTAAACACTGTATCCCACGACTTCGCATTGAGCTTGTTTTTAGATG 11 22739010 0.80586764 6 11 101 1 1.113943352 0.307692308 0.181818182 0.307692308 11 0 0 13 3L:22738993-22739049 7 7 1777 FBgn0010830 273 13.44666667 20.59666667 0.025641026 0.520575112 0.339860819 0 0 0 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 22747952 22747958 + 3L_22747952_22747958_+ 0.622260355 0.615451073 0.618855714 0.004814902 CG7369 FBtr0078530 22747716 22748614 3L + 22747938 22747969 3'utr CG7369 FlyBase G32401.1 ATTTCCGTTATCTTTGTGTTCCTGTTCCAAAT 77 22747951 0.707693543 6 76 831 0.99122807 2.053078443 0.105263158 0.38961039 0.587719298 77 1 0 113 3L:22747938-22747969 7 CG7369 FBtr0078530 22747716 22748614 TGTGTTC 7mer-m8 dme-miR-317-3p 3L + 22747938 22747972 3'utr CG7369 FlyBase G24485.1 ATTTCCGTTATCTTTGTGTTCCTGTTCCAAATTTG 62 22747951 0.707773385 6 61 674 1 1.995635195 0.181818182 0.435483871 0.646464646 62 0 0 99 3L:22747938-22747972 7 69 1778 FBgn0037188 267.3333333 8.483333333 12.97666667 0.258104738 8.133595285 5.317236065 1 1 1 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 22748070 22748077 + 3L_22748070_22748077_+ 0.370346638 0.369695273 0.370020956 0.000460539 CG7369 FBtr0078530 22747716 22748614 3L + 22748031 22748103 3'utr CG7369 FlyBase G32403.1 TTAATTAGACCATTGGGAGGATGGGAATAATGAAAGAATGTACTTAAGGCCGTACACGGCTAACAGCTAATGC 492 22748069 0.872856392 8 483 2403 0.984293194 2.751279104 0.139616056 0.16122449 0.282722513 490 9 0 564 3L:22748031-22748103 8 CG7369 FBtr0078530 22747716 22748614 GTACTTAA 8mer-A1 dme-miR-252-5p 3L + 22748037 22748100 3'utr CG7369 FlyBase G24486.1 AGACCATTGGGAGGATGGGAATAATGAAAGAATGTACTTAAGGCCGTACACGGCTAACAGCTAA 271 22748069 0.87474947 6 267 1316 0.995098039 2.608526034 0.137254902 0.357933579 0.573529412 271 2 0 406 3L:22748037-22748100 8 376 1779 FBgn0037188 267.3333333 8.483333333 12.97666667 1.406483791 44.32220039 28.97508348 1 1 1 0.2 dme-miR-8-3p 7mer-m8 CAGTATT 3L 22748217 22748223 + 3L_22748217_22748223_+ 0.66161524 0.654607023 0.658111132 0.004955546 CG7369 FBtr0078530 22747716 22748614 3L + 22748170 22748231 3'utr CG7369 FlyBase G32404.1 AAACCAATCTGACAAAGCTACATGAGTACGCGATATCCGTACGTGACCAGTATTTATATTTA 14 22748224 0.751754552 11 14 84 1 1.230448921 0.117647059 0.214285714 0.352941176 14 0 0 17 3L:22748170-22748231 7 CG7369 FBtr0078530 22747716 22748614 CAGTATT 7mer-m8 dme-miR-8-3p 3L + 22748185 22748227 3'utr CG7369 FlyBase G24487.1 AGCTACATGAGTACGCGATATCCGTACGTGACCAGTATTTATA 13 22748222 0.789043986 8 12 75 0.863636364 1.278753601 0 0.384615385 0.636363636 13 3 0 19 3L:22748185-22748227 7 9 1780 FBgn0037188 267.3333333 8.483333333 12.97666667 0.033665835 1.060903733 0.69355253 -7 -5 -6 0.2 dme-miR-282-5p 6mer2-7 GAGGCT 3L 22748323 22748328 + 3L_22748323_22748328_+ 0.999962408 0.962986685 0.981474546 0.026145768 CG7369 FBtr0078530 22747716 22748614 3L + 22748297 22748344 3'utr CG7369 FlyBase G32405.1 AACGGATTTCATTCTGATTCTGTCTCGAGGCTTTTTGCATCAGCAACA 41 22748329 0.706988239 6 41 396 1 1.716003344 0.096153846 0.243902439 0.403846154 41 0 0 52 3L:22748297-22748344 6 CG7369 FBtr0078530 22747716 22748614 GAGGCT 6mer2-7 dme-miR-282-5p 3L + 22748307 22748344 3'utr CG7369 FlyBase G24488.1 ATTCTGATTCTGTCTCGAGGCTTTTTGCATCAGCAACA 24 22748330 0.628369442 7 24 229 1 1.568201724 0.189189189 0.375 0.594594595 24 0 0 37 3L:22748307-22748344 6 32.5 1781 FBgn0037188 267.3333333 8.483333333 12.97666667 0.121571072 3.831041257 2.504495248 -6 -7 -6.5 0.2 dme-miR-283-5p 8mer-A1 TGATATTA 3L 22748527 22748534 + 3L_22748527_22748534_+ 0.591831319 0.513416146 0.552623733 0.05544792 CG7369 FBtr0078530 22747716 22748614 3L + 22748496 22748539 3'utr CG7369 FlyBase G32406.1 GATTTTGCAATATTGTGGATGAATTCATTATTGATATTAATTAT 7 22748525 0.989985562 5 7 69 1 0.84509804 0.142857143 0 0 7 0 0 7 3L:22748496-22748539 8 CG7369 FBtr0078530 22747716 22748614 TGATATTA 8mer-A1 dme-miR-283-5p 3L + 22748490 22748534 3'utr CG7369 FlyBase G24489.1 TTGCAAGATTTTGCAATATTGTGGATGAATTCATTATTGATATTA 6 22748523 0.993493826 4 5 62 0.833333333 0.698970004 0 0 0 6 1 0 5 3L:22748490-22748534 8 4.5 1782 FBgn0037188 267.3333333 8.483333333 12.97666667 0.016832918 0.530451866 0.346776265 2 4 3 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 22785085 22785091 + 3L_22785085_22785091_+ 0.706803929 0.722990804 0.714897366 0.011445867 SPoCk FBtr0306600|FBtr0306600|FBtr0306600|FBtr0113437|FBtr0113437|FBtr0113437|FBtr0078531|FBtr0078531|FBtr0078531|FBtr0078532|FBtr0078532|FBtr0078532|FBtr0332105|FBtr0332105|FBtr0332105|FBtr0302134|FBtr0302134|FBtr0302134 22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486 22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235 3L + 22784943 22785114 3'utr SPoCk FlyBase G32424.1 TACAATGGGCTGCAAAGCTTTTTTTATTTAACTTTTATTTTCATTTTATCTCTAAGTGCTTCTCTAGTTTCTAATGCTCACCGCGCAATTTGAGTCAATATGAAGTGTTTAATAATCTACAATGTCGGCAAAAACTGTTTAATGTGATATTATTTTAAGCACATAAACCAGA 198 22785081 0.991691345 22 184 2018 0.940677966 1.568201724 0.084745763 0.151515152 0.288135593 198 9 5 222 3L:22784943-22785114 7 SPoCk FBtr0302134|FBtr0302134|FBtr0302134|FBtr0332105|FBtr0332105|FBtr0332105|FBtr0078532|FBtr0078532|FBtr0078532|FBtr0078531|FBtr0078531|FBtr0078531|FBtr0113437|FBtr0113437|FBtr0113437|FBtr0306600|FBtr0306600|FBtr0306600 22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486 22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 22785056 22785115 3'utr SPoCk FlyBase G24498.2 AATCTACAATGTCGGCAAAAACTGTTTAATGTGATATTATTTTAAGCACATAAACCAGAT 107 22785081 0.719970686 11 96 1054 0.89261745 1.220761654 0.067114094 0.289719626 0.489932886 107 9 7 133 3L:22785056-22785115 7 135.5 1783 FBgn0052451 1200.69 35.10333333 53.84666667 0.112851777 3.860032286 2.516404606 4 4 4 0.2 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 22786246 22786253 + 3L_22786246_22786253_+ 0.66861949 0.668677793 0.668648641 4.12E-05 SPoCk FBtr0078533 22784486 22787631 3L + 22786198 22786275 3'utr SPoCk FlyBase G32425.1 GCTCACTCTGTCCGTCCGTATGTCTATCCGTATAAATGTAGAAATCTTGGCAGCTATAAAAGCTAGAGGTTAGGCATG 32 22786245 0.981636243 7 27 200 0.828571429 0.985276743 0.228571429 0.09375 0.171428571 32 4 2 29 3L:22786198-22786275 8 SPoCk FBtr0078533 22784486 22787631 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L + 22786197 22786272 3'utr SPoCk FlyBase G24500.1 TGCTCACTCTGTCCGTCCGTATGTCTATCCGTATAAATGTAGAAATCTTGGCAGCTATAAAAGCTAGAGGTTAGGC 19 22786245 0.973504655 4 19 119 1 1.477121255 0.433333333 0.526315789 0.7 19 0 0 30 3L:22786197-22786272 8 24.5 1784 FBgn0052451 1200.69 35.10333333 53.84666667 0.020404934 0.697939417 0.454995667 1 1 1 0.2 dme-miR-12-5p 7mer-A1 ATACTCA 3L 22790253 22790259 - 3L_22790253_22790259_- 0.823348656 0.810427529 0.816888092 0.009136668 jim FBtr0078582|FBtr0304985 22789231|22789231 22797911|22797911 3L - 22790212 22790310 3'utr jim FlyBase G39340.1 CGGAACAACACTAATCTCGGTCATTGCAAAATTGATTGCATAAAACAATGTATACTCAAGTCTTGGCAACTATTTAAAAAAAAATTCACGTTTAATTCC 23 22790262 0.974170267 7 23 141 1 1.431363764 0.148148148 0.173913043 0.296296296 23 0 0 27 3L:22790212-22790310 7 jim FBtr0304985|FBtr0078582 22789231|22789231 22797911|22797911 ATACTCA 7mer-A1 dme-miR-12-5p 3L - 22790214 22790268 3'utr jim FlyBase G29715.1 AAACAATGTATACTCAAGTCTTGGCAACTATTTAAAAAAAAATTCACGTTTAATT 11 22790247 0.976771395 5 11 70 1 1.230448921 0.058823529 0.454545455 0.647058824 11 0 0 17 3L:22790214-22790268 7 12.5 1785 FBgn0027339 2455.313333 43.04666667 66.12 0.005091 0.290382531 0.189050212 3 -12 -4.5 0.2 dme-miR-33-5p 7mer-A1 AATGCAA 3L 22796093 22796099 - 3L_22796093_22796099_- 0.543213579 0.513602888 0.528408233 0.020937927 jim FBtr0078582|FBtr0333212|FBtr0100184|FBtr0330076|FBtr0333213|FBtr0333211|FBtr0304985 22789231|22795975|22795975|22795975|22795975|22795975|22789231 22797911|22797911|22797911|22797557|22797911|22797911|22797911 3L - 22796046 22796107 5'utr jim FlyBase G39342.1 AAGTTTCTAATGCAATCAAAGTAAGTGCTCCGAATACGGTTTGTTTTCACTGTTTTAAATTT 22 22796085 0.879169256 10 21 180 0.931034483 1.431363764 0.275862069 0.272727273 0.448275862 22 2 0 27 3L:22796046-22796107 7 jim FBtr0333211|FBtr0304985|FBtr0330076|FBtr0333213|FBtr0100184|FBtr0078582|FBtr0333212 22795975|22789231|22795975|22795975|22795975|22789231|22795975 22797911|22797911|22797557|22797911|22797911|22797911|22797911 AATGCAA 7mer-A1 dme-miR-33-5p 3L - 22796010 22796107 5'utr jim FlyBase G29718.1 AAGTTTCTAATGCAATCAAAGTAAGTGCTCCGAATACGGTTTGTTTTCACTGTTTTAAATTTAAAGTTTATGAATTATGTTTGGATATTTTATTTAAA 14 22796082 0.985388586 11 12 115 0.909090909 1 0.045454545 0.5 0.681818182 14 1 1 20 3L:22796010-22796107 7 6.5 1786 FBgn0027339 2455.313333 43.04666667 66.12 0.00264732 0.150998916 0.09830611 -14 -17 -15.5 0.2 dme-miR-283-5p 8mer-m1 TGATATTT 3L 22796248 22796255 - 3L_22796248_22796255_- 0.538294092 0.552560379 0.545427235 0.010087797 jim FBtr0078582|FBtr0333212|FBtr0100184|FBtr0330076|FBtr0333213|FBtr0333211|FBtr0304985 22789231|22795975|22795975|22795975|22795975|22795975|22789231 22797911|22797911|22797911|22797557|22797911|22797911|22797911 3L - 22796176 22796348 5'utr jim FlyBase G39344.1 AGTTCTTCCCCTGCCAACTGTGTGGATATAATCGACAAATTTAGTTTCTTAACAAATTTTCCAATGTACCGTCAAAGCATTTATAACTGTTATTGATATTTTAGAATATGTTTCCTAAAAAGTATACATATTTTATGTATATGTAGAAAACACCGTGGAAGATAAGAAATTAT 75 22796284 0.99043153 22 68 691 0.914634146 1.176091259 0.024390244 0.093333333 0.170731707 75 3 4 75 3L:22796176-22796348 8 jim FBtr0333211|FBtr0304985|FBtr0330076|FBtr0333213|FBtr0100184|FBtr0078582|FBtr0333212 22795975|22789231|22795975|22795975|22795975|22789231|22795975 22797911|22797911|22797557|22797911|22797911|22797911|22797911 TGATATTT 8mer-m1 dme-miR-283-5p 3L - 22796212 22796357 5'utr jim FlyBase G29720.1 CACCATCTAAGTTCTTCCCCTGCCAACTGTGTGGATATAATCGACAAATTTAGTTTCTTAACAAATTTTCCAATGTACCGTCAAAGCATTTATAACTGTTATTGATATTTTAGAATATGTTTCCTAAAAAGTATACATATTTTATG 62 22796284 0.991149783 21 51 548 0.831168831 1.204119983 0.064935065 0.209677419 0.363636364 62 10 3 64 3L:22796212-22796357 8 27 1787 FBgn0027339 2455.313333 43.04666667 66.12 0.01099656 0.627226266 0.408348457 29 29 29 0.2 dme-miR-7-5p 7mer-m8 GTCTTCC 3L 22796627 22796633 - 3L_22796627_22796633_- 0.704446249 0.705853095 0.705149672 0.000994829 jim FBtr0078582|FBtr0333212|FBtr0100184|FBtr0330076|FBtr0333213|FBtr0333211|FBtr0304985 22789231|22795975|22795975|22795975|22795975|22795975|22789231 22797911|22797911|22797911|22797557|22797911|22797911|22797911 3L - 22796595 22796671 5'utr jim FlyBase G39345.1 ATGAAACCTTAAGTACATTGACTTAGGATTCATTTGTTGTCTTCCCCAACTAATTATGTGTAATTTATGTTGAGTTT 37 22796634 0.989463104 9 36 350 0.956521739 1.643452676 0.086956522 0.216216216 0.369565217 37 2 0 44 3L:22796595-22796671 7 jim FBtr0333211|FBtr0304985|FBtr0330076|FBtr0333213|FBtr0100184|FBtr0078582|FBtr0333212 22795975|22789231|22795975|22795975|22795975|22789231|22795975 22797911|22797911|22797557|22797911|22797911|22797911|22797911 GTCTTCC 7mer-m8 dme-miR-7-5p 3L - 22796618 22796664 5'utr jim FlyBase G29721.1 CTTAAGTACATTGACTTAGGATTCATTTGTTGTCTTCCCCAACTAAT 22 22796634 0.647549083 8 21 194 0.931034483 0.954242509 0.068965517 0.272727273 0.448275862 22 0 2 27 3L:22796618-22796664 7 22 1788 FBgn0027339 2455.313333 43.04666667 66.12 0.00896016 0.511073254 0.332728373 1 1 1 0.2 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 22796997 22797004 - 3L_22796997_22797004_- 0.668726053 0.66872533 0.668725691 5.66E-07 jim FBtr0078582|FBtr0333212|FBtr0100184|FBtr0330076|FBtr0333213|FBtr0333211|FBtr0304985 22789231|22795975|22795975|22795975|22795975|22795975|22789231 22797911|22797911|22797911|22797557|22797911|22797911|22797911 3L - 22796888 22797086 5'utr jim FlyBase G39347.1 AATTAATCGAGGATATACCACTTAGGCGTAATACTAGGATAGCTCCGATACAATGAGTATGAACATGTGACGTGATAGATAGGGCAGCTATTTGTGGCGAAGGCAGAAGGGGCAGAGCAAAAGGTTGATGGCAAAGAATAGGATGGGGAACGCAGACGTTGGCGCTGAGTAATTTGATTTTTGAAGCAGCATCAAAATT 194 22796995 0.956738101 29 175 1173 0.902542373 1.851258349 0.419491525 0.164948454 0.313559322 194 21 2 213 3L:22796888-22797086 8 jim FBtr0333211|FBtr0304985|FBtr0330076|FBtr0333213|FBtr0100184|FBtr0078582|FBtr0333212 22795975|22789231|22795975|22795975|22795975|22789231|22795975 22797911|22797911|22797557|22797911|22797911|22797911|22797911 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L - 22796917 22797090 5'utr jim FlyBase G29724.1 ATACAATTAATCGAGGATATACCACTTAGGCGTAATACTAGGATAGCTCCGATACAATGAGTATGAACATGTGACGTGATAGATAGGGCAGCTATTTGTGGCGAAGGCAGAAGGGGCAGAGCAAAAGGTTGATGGCAAAGAATAGGATGGGGAACGCAGACGTTGGCGCTGAGT 151 22797007 0.966308775 22 135 919 0.848360656 1.838849091 0.409836066 0.42384106 0.643442623 151 35 2 207 3L:22796917-22797090 8 132.5 1789 FBgn0027339 2455.313333 43.04666667 66.12 0.053964599 3.078054824 2.003932244 -9 3 -3 0.2 dme-miR-14-3p 6mer3-8 AAGACT 3L 22797170 22797175 - 3L_22797170_22797175_- 0.991718598 0.990556156 0.991137377 0.000821941 jim FBtr0078582|FBtr0333212|FBtr0100184|FBtr0330076|FBtr0333213|FBtr0333211|FBtr0304985 22789231|22795975|22795975|22795975|22795975|22795975|22789231 22797911|22797911|22797911|22797557|22797911|22797911|22797911 3L - 22797155 22797278 5'utr jim FlyBase G39348.1 GGTCAATGTGTAAGAGAAGTAATGAGCAGAATGAAGGAGAGAAACGAGAGCCAAAACACAACGTTATACGATTTCTATTTGTTTTAGCACCCCAACAACTTTTAAGACTAAAAATACATCAAAT 31 22797177 0.999975171 11 27 131 0.861111111 1.491361694 0.25 0.161290323 0.277777778 31 5 0 31 3L:22797155-22797278 6 jim FBtr0333211|FBtr0304985|FBtr0330076|FBtr0333213|FBtr0100184|FBtr0078582|FBtr0333212 22795975|22789231|22795975|22795975|22795975|22789231|22795975 22797911|22797911|22797557|22797911|22797911|22797911|22797911 AAGACT 6mer3-8 dme-miR-14-3p 3L - 22797156 22797204 5'utr jim FlyBase G29725.1 CTATTTGTTTTAGCACCCCAACAACTTTTAAGACTAAAAATACATCAAA 15 22797176 0.549390533 4 13 77 0.823529412 1.146128036 0 0.133333333 0.235294118 15 3 0 14 3L:22797156-22797204 6 12.5 1790 FBgn0027339 2455.313333 43.04666667 66.12 0.005091 0.290382531 0.189050212 2 1 1.5 0.2 dme-bantam-3p 6mer2-7 GATCTC 3L 22797563 22797568 - 3L_22797563_22797568_- 0.989148915 0.969988818 0.979568866 0.013548237 jim FBtr0078582|FBtr0333212|FBtr0100184|FBtr0333213|FBtr0333211|FBtr0304985 22789231|22795975|22795975|22795975|22795975|22789231 22797911|22797911|22797911|22797911|22797911|22797911 3L - 22797366 22797611 stop_codon jim FlyBase G39350.1 TCACACGCGATTCCCATTCATCCACACATACACTCGATATTCGGATCTCTATGATGTCATCAGTAGGAGAGACAGGAGCCGGAGGCAGGAATTCAAAGTTAATAAACACAAACTATTCACCATACTTCATAGGTTCGATTAGTTCTTTAGTATTAGACGCAAAACAAATTCTCCTAGTTTTTAAAACTAATCTTAAAATCACAAAACACAGTTTGGTAATGGCAAACGAACGAACCGAGAGGAGCT 115 22797561 0.983779384 27 105 819 0.925925926 1.619788758 0.192592593 0.147826087 0.274074074 115 8 2 125 3L:22797366-22797611 6 jim FBtr0333211|FBtr0304985|FBtr0333213|FBtr0100184|FBtr0078582|FBtr0333212 22795975|22789231|22795975|22795975|22789231|22795975 22797911|22797911|22797911|22797911|22797911|22797911 GATCTC 6mer2-7 dme-bantam-3p 3L - 22797416 22797598 stop_codon jim FlyBase G29727.1 CCATTCATCCACACATACACTCGATATTCGGATCTCTATGATGTCATCAGTAGGAGAGACAGGAGCCGGAGGCAGGAATTCAAAGTTAATAAACACAAACTATTCACCATACTTCATAGGTTCGATTAGTTCTTTAGTATTAGACGCAAAACAAATTCTCCTAGTTTTTAAAACTAATCTTAA 81 22797561 0.970681368 19 75 596 0.918699187 2.053078443 0.276422764 0.419753086 0.617886179 81 10 0 113 3L:22797416-22797598 6 52.5 1791 FBgn0027339 2455.313333 43.04666667 66.12 0.0213822 1.219606628 0.794010889 -7 -7 -7 0.2 dme-miR-8-3p 7mer-A1 AGTATTA 3L 22905391 22905397 + 3L_22905391_22905397_+ 0.819275908 0.822491019 0.820883463 0.002273419 BoYb FBtr0078559 22905182 22905470 3L + 22905369 22905405 3'utr BoYb FlyBase G32463.1 TAGAAAAAATCGTGTGCTCTTGAGTATTAAAACCTGT 11 22905389 0.733891611 3 10 89 0.933333333 1.146128036 0.066666667 0.272727273 0.466666667 11 1 0 14 3L:22905369-22905405 7 BoYb FBtr0078559 22905182 22905470 AGTATTA 7mer-A1 dme-miR-8-3p 3L + 22905367 22905401 3'utr BoYb FlyBase G24523.1 ACTAGAAAAAATCGTGTGCTCTTGAGTATTAAAAC 6 22905388 0.974411496 3 6 39 1 1 0 0.666666667 0.8 6 0 0 10 3L:22905367-22905401 7 8 1792 FBgn0037205 488.74 16.67 25.54666667 0.016368621 0.479904019 0.313152401 2 3 2.5 0.2 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 22914478 22914484 + 3L_22914478_22914484_+ 0.823270182 0.822222041 0.822746111 0.000741189 CG12768 FBtr0331397|FBtr0331396 22914244|22914244 22914758|22914758 3L + 22914453 22914504 3'utr CG12768 FlyBase G32470.1 AAATAATTTTTTGACTTCGCCTACTGCAGCTATATTATAAAGTCGTCCGATT 12 22914477 0.793827541 5 12 102 1 1.113943352 0 0.083333333 0.153846154 12 0 0 13 3L:22914453-22914504 7 CG12768 FBtr0331396|FBtr0331397 22914244|22914244 22914758|22914758 GCAGCTA 7mer-A1 dme-miR-980-3p 3L + 22914462 22914490 3'utr CG12768 FlyBase G24530.1 TTTGACTTCGCCTACTGCAGCTATATTAT 11 22914475 0.703517005 5 10 74 0.928571429 1.113943352 0.142857143 0.181818182 0.357142857 11 1 0 13 3L:22914462-22914490 7 11 1793 FBgn0037206 334.1233333 20.85 31.84666667 0.032921975 0.527577938 0.345405066 1 3 2 0.2 dme-miR-263a-5p 8mer-A1 GTGCCATA 3L 22951555 22951562 + 3L_22951555_22951562_+ 0.56905047 0.570674132 0.569862301 0.001148059 Mes2 FBtr0078561|FBtr0078563 22951389|22951389 22952248|22952248 3L + 22951204 22951589 stop_codon Mes2 FlyBase G32487.1 GGGCGTCGCAAGCGGAGGGTTGGATCTGCCGCCCCCACAAACTGTACGTGAGGTTTTGAACTCCAAGTTCTGCGGCTTTATTTCAGCCAAGCTAAACAGCATGGAGGACTCGGACGCGGACAATTTAATGAATCGCATTCTTCTCTTACTGGTTCAAGTGCAGCAGTGCGAAGGGTCCACGAAATAGACAGCGGAGGAGAAGAGCGCTAAGTGTACGGGTGTAATTATAGTAGCCAAAAAAAAGTACATAATGGAATGATGTTGCTGCTCAGAGCACTTATAACTGAATTTTCTTGCCATTATATATTACTTTCCTAAAGAAATACAAATTTACTTGCCAATGCCAAATCTGTGCCATACCAAAAGGATCAATCAAATATGAATGA 970 22951554 0.999995003 64 933 5859 0.966192171 2.190731785 0.072064057 0.135051546 0.253558719 970 32 6 1086 3L:22951204-22951589 8 Mes2 FBtr0078561|FBtr0078563 22951389|22951389 22952248|22952248 GTGCCATA 8mer-A1 dme-miR-263a-5p 3L + 22951332 22951588 stop_codon Mes2 FlyBase G24549.1 TGAATCGCATTCTTCTCTTACTGGTTCAAGTGCAGCAGTGCGAAGGGTCCACGAAATAGACAGCGGAGGAGAAGAGCGCTAAGTGTACGGGTGTAATTATAGTAGCCAAAAAAAAGTACATAATGGAATGATGTTGCTGCTCAGAGCACTTATAACTGAATTTTCTTGCCATTATATATTACTTTCCTAAAGAAATACAAATTTACTTGCCAATGCCAAATCTGTGCCATACCAAAAGGATCAATCAAATATGAATG 652 22951554 0.969292382 43 621 3926 0.952565344 2.390935107 0.065827686 0.377300613 0.60696999 652 46 3 984 3L:22951332-22951588 8 531 1794 FBgn0037207 3401.653333 185.0666667 283.5166667 0.156100563 2.869236311 1.872905767 1 1 1 0.2 dme-miR-79-3p 7mer-A1 AGCTTTA 3L 22951968 22951974 + 3L_22951968_22951974_+ 0.823349562 0.82334956 0.823349561 0 Mes2 FBtr0078561|FBtr0078563 22951389|22951389 22952248|22952248 3L + 22951892 22952067 3'utr Mes2 FlyBase G32488.1 AAAAAGCGAGCATATTACTCATAGTTTCATATACAGCGATATGAATATTAACAATATCTGAACACTAAATGAGAACAGCTTTAACAATTTGTCGTTTTTGAATAAAACACCATCTTTGGCAGTAATGCTTTGCTATCGATGTACGCAGACAATGTTTTGGCCATTCAGCCCAATTT 46 22951961 0.922966987 25 43 358 0.936170213 1.643452676 0.191489362 0.02173913 0.042553191 46 3 0 44 3L:22951892-22952067 7 Mes2 FBtr0078561|FBtr0078563 22951389|22951389 22952248|22952248 AGCTTTA 7mer-A1 dme-miR-79-3p 3L + 22951843 22952013 3'utr Mes2 FlyBase G24552.1 CTTGTTAAGTTGAAAACGTAGAAATTAGAAAAGAAAAGTTTTTAACTTAAAAAAGCGAGCATATTACTCATAGTTTCATATACAGCGATATGAATATTAACAATATCTGAACACTAAATGAGAACAGCTTTAACAATTTGTCGTTTTTGAATAAAACACCATCTTTGGCAG 34 22951980 0.983481742 16 30 237 0.914893617 1.633468456 0.191489362 0.294117647 0.489361702 34 4 0 43 3L:22951843-22952013 7 7 1795 FBgn0037207 3401.653333 185.0666667 283.5166667 0.002057823 0.037824207 0.024689907 7 -12 -2.5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 22952122 22952127 + 3L_22952122_22952127_+ 0.923312936 0.926429064 0.924871 0.002203486 Mes2 FBtr0078561|FBtr0078563 22951389|22951389 22952248|22952248 3L + 22952090 22952135 3'utr Mes2 FlyBase G32489.1 TTTCCGTTTTTCGGTGGATATTGAGTAATAAAGTACCTTTAAATAT 8 22952129 0.638003695 5 8 57 1 0.954242509 0 0.125 0.222222222 8 0 0 9 3L:22952090-22952135 6 Mes2 FBtr0078561|FBtr0078563 22951389|22951389 22952248|22952248 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 22952063 22952182 3'utr Mes2 FlyBase G24553.1 AATTTAAATCAAAAATTTTGAAAAAGTTTTCCGTTTTTCGGTGGATATTGAGTAATAAAGTACCTTTAAATATAAAAAAATCAAACGTGTCTACCGAACATGAACATAATCAGCCGATTT 24 22952129 0.985394676 12 21 176 0.914285714 1.505149978 0.114285714 0.416666667 0.6 24 3 0 32 3L:22952063-22952182 6 9 1796 FBgn0037207 3401.653333 185.0666667 283.5166667 0.002645772 0.048631124 0.031744166 -7 -7 -7 0.2 dme-miR-988-3p 7mer-A1 CAAGGGA 3L 23318907 23318913 - 3L_23318907_23318913_- 0.774260443 0.777219677 0.77574006 0.002092541 alpha-Cat FBtr0339894 23318644 23329837 3L - 23318893 23318943 3'utr alpha-Cat FlyBase G39447.2 AAAACCAGAAGAAGTACGGGCCAAAGTTCGCAAGGGATCTCAAAAAAAGGT 31 23318917 0.942441584 3 26 88 0.891891892 1.217483944 0.216216216 0.193548387 0.324324324 31 3 1 33 3L:23318893-23318943 7 alpha-Cat FBtr0339894 23318644 23329837 CAAGGGA 7mer-A1 dme-miR-988-3p 3L - 23318893 23318964 3'utr alpha-Cat FlyBase G29804.1 AAAACCATTGGTCAGGCCTGAAAAACCAGAAGAAGTACGGGCCAAAGTTCGCAAGGGATCTCAAAAAAAGGT 27 23318917 0.759385332 7 25 88 0.930232558 1.602059991 0.209302326 0.481481481 0.674418605 27 3 0 40 3L:23318893-23318964 7 24.5 1797 FBgn0010215 3733.256667 144.9433333 221.23 0.006562635 0.169031576 0.110744474 4 4 4 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 23328751 23328756 - 3L_23328751_23328756_- 0.87045432 0.999909657 0.935181988 0.091538791 alpha-Cat FBtr0339894 23318644 23329837 3L - 23328725 23328782 5'utr alpha-Cat FlyBase G39456.1 TGGATAATTATGAACCATGTATTTACACCAAACGAGTCTTAGAAGCAGTCAAAGTTCT 9 23328760 0.961543715 5 9 50 1 1 0.1 0.111111111 0.2 9 0 0 10 3L:23328725-23328782 6 alpha-Cat FBtr0339894 23318644 23329837 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 23328717 23328773 5'utr alpha-Cat FlyBase G29808.1 ATGAACCATGTATTTACACCAAACGAGTCTTAGAAGCAGTCAAAGTTCTACGAGATC 7 23328759 0.93692024 4 7 29 1 1.146128036 0.214285714 0.428571429 0.714285714 7 0 0 14 3L:23328717-23328773 6 7 1798 FBgn0010215 3733.256667 144.9433333 221.23 0.001875039 0.048294736 0.031641278 4 3 3.5 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 3L 23329045 23329050 - 3L_23329045_23329050_- 0.995563919 0.985487997 0.990525958 0.007124737 alpha-Cat FBtr0339894 23318644 23329837 3L - 23328997 23329069 5'utr alpha-Cat FlyBase G39459.1 AATAAATGCAGCATCGATATTGACTGTTAGACCGAATTCAAAAGTAGCTCAAGAAAATATGACTACTTATCGA 173 23329043 0.975078345 8 172 1076 0.995614035 2.054995862 0.210526316 0.25433526 0.434210526 173 0 1 227 3L:23328997-23329069 6 alpha-Cat FBtr0339894 23318644 23329837 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 23329017 23329067 5'utr alpha-Cat FlyBase G29811.1 TAAATGCAGCATCGATATTGACTGTTAGACCGAATTCAAAAGTAGCTCAAG 87 23329043 0.970834668 6 87 541 1 2.117271296 0.145038168 0.413793103 0.610687023 87 0 0 131 3L:23329017-23329067 6 127 1799 FBgn0010215 3733.256667 144.9433333 221.23 0.034018556 0.876204494 0.574063192 -7 -7 -7 0.2 dme-miR-305-5p 7mer-A1 GTACAAA 3L 234028 234034 - 3L_234028_234034_- 0.77963812 0.780039018 0.779838569 0.000283479 E(bx) FBtr0332101|FBtr0332103|FBtr0301348|FBtr0072522|FBtr0332102|FBtr0332104|FBtr0072521 233924|233924|233924|233924|233924|233924|233924 236879|234298|234298|234298|234298|234298|234298 3L - 233951 234112 3'utr E(bx) FlyBase G32851.1 AACGTACACCAGTATGCAATAAATTTCATATTCACCAGACATTTGTAAGATTAAAAATAATTAAGTAAAACCCCCTTTGTACAAAACATTAAAGTGTAAATAAACAGCATGCATTTCATTTGATATCCTTATCATATGCTGTAGGTTTAAACTTAGGCGTAT 118 234036 0.940288501 20 113 826 0.957746479 1.531478917 0.035211268 0.169491525 0.309859155 118 3 3 136 3L:233951-234112 7 E(bx) FBtr0072521|FBtr0332104|FBtr0332102|FBtr0072522|FBtr0301348|FBtr0332103|FBtr0332101 233924|233924|233924|233924|233924|233924|233924 234298|234298|234298|234298|234298|234298|236879 GTACAAA 7mer-A1 dme-miR-305-5p 3L - 233965 234094 3'utr E(bx) FlyBase G24839.1 ATAAATTTCATATTCACCAGACATTTGTAAGATTAAAAATAATTAAGTAAAACCCCCTTTGTACAAAACATTAAAGTGTAAATAAACAGCATGCATTTCATTTGATATCCTTATCATATGCTGTAGGTTT 88 234036 0.756104698 16 81 580 0.9375 1.477121255 0.0234375 0.329545455 0.5390625 88 5 3 120 3L:233965-234094 7 60 1800 FBgn0000541 5641.79 79.62333333 122.1466667 0.010634923 0.753547955 0.49121275 2 2 2 0.2 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3L 234419 234424 - 3L_234419_234424_- 0.844011974 0.549023685 0.696517829 0.208588227 E(bx) FBtr0332101 233924 236879 3L - 234387 234475 3'utr E(bx) FlyBase G32854.1 TCAAACACCTATACCAAACTATCTGAGTTTATAGGCGATATGACAAAAATTTTTGACAACTGCCGTTACTATAACCCAAAAGAATCATC 16 234409 0.979514159 12 15 100 0.947368421 1.255272505 0.157894737 0.1875 0.315789474 16 1 0 18 3L:234387-234475 6 E(bx) FBtr0332101 233924 236879 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3L - 234393 234431 3'utr E(bx) FlyBase G24842.1 AAAAATTTTTGACAACTGCCGTTACTATAACCCAAAAGA 6 234410 0.968554305 5 5 42 0.875 0.84509804 0 0.333333333 0.5 6 1 0 7 3L:234393-234431 6 6.5 1801 FBgn0000541 5641.79 79.62333333 122.1466667 0.001152117 0.081634362 0.053214715 -15 -14 -14.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3L 235158 235165 - 3L_235158_235165_- 0.410652953 0.375238162 0.392945558 0.025042045 E(bx) FBtr0332101|FBtr0332101|FBtr0332101 233924|233924|233924 236879|236879|236879 3L - 235106 235189 3'utr E(bx) FlyBase G32856.1 CGACGAGTCACAATTTTATATATGCTGTGATAAATGCCAGGATTGGTTTCATGGCCGTTGCGTTGGAATACTTCAGAGCGAAGC 107 235167 0.732358486 14 95 945 0.888888889 1.572096768 0.023809524 0.177570093 0.301587302 107 12 2 112 3L:235106-235189 8 E(bx) FBtr0332101|FBtr0332101|FBtr0332101 233924|233924|233924 236879|236879|236879 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 235100 235190 3'utr E(bx) FlyBase G24845.1 ACGACGAGTCACAATTTTATATATGCTGTGATAAATGCCAGGATTGGTTTCATGGCCGTTGCGTTGGAATACTTCAGAGCGAAGCAGAGTT 82 235167 0.990608586 14 71 733 0.846153846 1.439332694 0.053846154 0.426829268 0.638461538 82 17 3 110 3L:235100-235190 8 84 1802 FBgn0000541 5641.79 79.62333333 122.1466667 0.014888892 1.054967137 0.68769785 2 2 2 0.2 dme-miR-277-3p 6mer3-8 TGCATT 3L 235246 235251 - 3L_235246_235251_- 0.95470669 0.674646263 0.814676477 0.198032608 E(bx) FBtr0332101 233924 236879 3L - 235222 235253 3'utr E(bx) FlyBase G32858.1 TTTGCATTGATTGCAAGAGGGCGAGAGAAACG 7 235244 0.961445126 4 6 32 0.777777778 0.84509804 0 0.285714286 0.444444444 7 2 0 7 3L:235222-235253 6 E(bx) FBtr0332101 233924 236879 TGCATT 6mer3-8 dme-miR-277-3p 3L - 235226 235259 3'utr E(bx) FlyBase G24847.1 AGTTCATTTGCATTGATTGCAAGAGGGCGAGAGA 5 235244 0.983923368 2 4 31 0.625 0.698970004 0.125 0.4 0.625 5 3 0 5 3L:235226-235259 6 6 1803 FBgn0000541 5641.79 79.62333333 122.1466667 0.001063492 0.075354795 0.049121275 -7 -7 -7 0.2 dme-miR-8-3p 8mer-A1 CAGTATTA 3L 235287 235294 - 3L_235287_235294_- 0.665925457 0.665931289 0.665928373 4.10E-06 E(bx) FBtr0332101 233924 236879 3L - 235257 235315 3'utr E(bx) FlyBase G32859.1 TTGGTTCCATGGGGATTGTGTCAGTATTACCGAGGAAGCTTCTAAAAAACTATCGGAGT 76 235295 0.983374433 8 72 541 0.941860465 1.908485019 0.546511628 0.105263158 0.209302326 76 5 0 81 3L:235257-235315 8 E(bx) FBtr0332101 233924 236879 CAGTATTA 8mer-A1 dme-miR-8-3p 3L - 235271 235340 3'utr E(bx) FlyBase G24848.1 ACGTGGGGTGCGACTTGTGCAGCAATTGGTTCCATGGGGATTGTGTCAGTATTACCGAGGAAGCTTCTAA 46 235295 0.708453638 9 40 329 0.811594203 1.146128036 0.608695652 0.391304348 0.594202899 46 10 3 56 3L:235271-235340 8 56.5 1804 FBgn0000541 5641.79 79.62333333 122.1466667 0.010014552 0.709590991 0.462558673 1 1 1 0.2 dme-miR-79-3p 8mer-A1 TAGCTTTA 3L 2367921 2367928 - 3L_2367921_2367928_- 0.532862464 0.587337688 0.560100076 0.038519783 CG1317 FBtr0345587 2367841 2368638 3L - 2367910 2367944 3'utr CG1317 FlyBase G33670.1 ATGAACATTTTCGAGTTAGCTTTACGAACTGTAAA 24 2367929 0.799773147 2 23 191 0.964285714 1.130333768 0.035714286 0.166666667 0.285714286 24 0 1 27 3L:2367910-2367944 8 CG1317 FBtr0345587 2367841 2368638 TAGCTTTA 8mer-A1 dme-miR-79-3p 3L - 2367902 2367980 3'utr CG1317 FlyBase G25462.1 AAGTGGTGAAAAATGAATGGATAGTGGAATAGAAAAATGAACATTTTCGAGTTAGCTTTACGAACTGTAAAAATTACAT 14 2367929 0.980145012 5 14 101 1 1.361727836 0.217391304 0.5 0.695652174 14 0 0 23 3L:2367902-2367980 8 17.5 1805 FBgn0035333 712.6366667 22.14333333 33.55333333 0.024556693 0.790305585 0.521557719 1 1 1 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 3L 2368137 2368142 - 3L_2368137_2368142_- 0.961199843 0.979060411 0.970130127 0.012629351 CG1317 FBtr0072901|FBtr0300773|FBtr0345587 2368012|2368012|2367841 2368638|2368638|2368638 3L - 2368067 2368154 3'utr CG1317 FlyBase G33671.2 TTGTATGATATTTTGACTTCCGCCACATCCTTACAAGCACTTACAGAACTAAACGATGGGCAGCGATTAAACCTTGTATTAGAGACGT 16 2368137 0.807679161 9 14 96 0.954545455 1.322219295 0.181818182 0.375 0.545454545 16 1 0 21 3L:2368067-2368154 6 CG1317 FBtr0300773|FBtr0345587|FBtr0072901 2368012|2367841|2368012 2368638|2368638|2368638 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 2368070 2368145 3'utr CG1317 FlyBase G25464.1 ATTTTGACTTCCGCCACATCCTTACAAGCACTTACAGAACTAAACGATGGGCAGCGATTAAACCTTGTATTAGAGA 6 2368137 0.982231392 5 6 41 1 1.041392685 0.090909091 0.333333333 0.636363636 6 0 0 11 3L:2368070-2368145 6 6 1806 FBgn0035333 712.6366667 22.14333333 33.55333333 0.008419438 0.270961915 0.178819789 -5 -5 -5 0.2 dme-miR-282-5p 7mer-A1 GAGGCTA 3L 2368550 2368556 - 3L_2368550_2368556_- 0.770607535 0.770194263 0.770400899 0.000292177 CG1317 FBtr0072901 2368012 2368638 3L - 2368533 2368575 3'utr CG1317 FlyBase G33673.1 AATAAATTATCAGCTCATGGAGGCTATTAGGTTCTCACGTTTA 129 2368558 0.913325701 6 126 996 0.981707317 1.90579588 0.018292683 0.209302326 0.37804878 129 2 1 161 3L:2368533-2368575 7 CG1317 FBtr0072901 2368012 2368638 GAGGCTA 7mer-A1 dme-miR-282-5p 3L - 2368531 2368595 3'utr CG1317 FlyBase G25466.1 GCGACAGGAGGAGGGGAATCAATAAATTATCAGCTCATGGAGGCTATTAGGTTCTCACGTTTAAA 59 2368558 0.982214949 5 57 415 0.99009901 2 0.02970297 0.474576271 0.693069307 59 1 0 100 3L:2368531-2368595 7 92 1807 FBgn0035333 712.6366667 22.14333333 33.55333333 0.129098044 4.15474936 2.741903437 2 2 2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 23749013 23749019 + 3L_23749013_23749019_+ 0.798444951 0.7988213 0.798633126 0.000266084 CG17698 FBtr0111166|FBtr0111166|FBtr0111166|FBtr0333913|FBtr0333913|FBtr0333913|FBtr0333914|FBtr0333914|FBtr0333914|FBtr0333912|FBtr0333912|FBtr0333912 23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858 23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058 3L + 23748928 23749036 3'utr CG17698 FlyBase G32572.1 TTGAATTTGACAGTTTCCAAAAGCCAAACACTTGAAATACTTTAAAATATTTAATTATTAGTGATTAAATTTATGTATATTTTTTTGTGATAAAAATAAATTTAGAATA 92 23749011 0.983716914 20 80 1000 0.865384615 1.255272505 0.009615385 0.130434783 0.230769231 92 10 4 90 3L:23748928-23749036 7 CG17698 FBtr0333912|FBtr0333912|FBtr0333912|FBtr0333914|FBtr0333914|FBtr0333914|FBtr0333913|FBtr0333913|FBtr0333913|FBtr0111166|FBtr0111166|FBtr0111166 23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858 23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 23748896 23749045 3'utr CG17698 FlyBase G24619.1 TTTCATAGAACAAAAAAACCAATTTTTTATTTTTGAATTTGACAGTTTCCAAAAGCCAAACACTTGAAATACTTTAAAATATTTAATTATTAGTGATTAAATTTATGTATATTTTTTTGTGATAAAAATAAATTTAGAATATTATAAAGT 80 23749011 0.993574972 18 72 894 0.90990991 1.527200119 0.036036036 0.3125 0.504504505 80 8 2 101 3L:23748896-23749045 7 76 1808 FBgn0040056 619.7966667 30.24 46.48666667 0.12262086 2.513227513 1.634877384 2 2 2 0.2 dme-miR-79-3p 7mer-m8 TAGCTTT 3L 238415 238421 - 3L_238415_238421_- 0.388343546 0.473179495 0.43076152 0.059988111 E(bx) FBtr0072523|FBtr0301349 238321|238321 239039|239039 3L - 238392 238565 3'utr E(bx) FlyBase G32865.1 TAAAAGTGTGAATACCTTATTAAATATAAGTAAATATTACATAGTGAGTAGGAAGCACATTAAGCTTATTAACTTAACAATAATCCAGACTGTCACCTAATGTTAAAAACCAAGGCAAAAGTATTAGAACAACTTTGCTCCGATTAGCTTTTCTTGCCTGAGGGACATTTGGTT 473 238422 0.909691581 28 466 4097 0.983271375 2.723455672 0.161710037 0.122621564 0.228624535 473 9 0 529 3L:238392-238565 7 E(bx) FBtr0301349|FBtr0072523 238321|238321 239039|239039 TAGCTTT 7mer-m8 dme-miR-79-3p 3L - 238397 238443 3'utr E(bx) FlyBase G24849.1 ATTAGAACAACTTTGCTCCGATTAGCTTTTCTTGCCTGAGGGACATT 120 238422 0.850697121 11 116 1171 0.970238095 2.212187604 0.178571429 0.316666667 0.511904762 120 5 0 163 3L:238397-238443 7 168 1809 FBgn0000541 5641.79 79.62333333 122.1466667 0.029777783 2.109934274 1.375395699 1 1 1 0.2 dme-miR-263a-5p 6mer3-8 GTGCCA 3L 2408753 2408758 + 3L_2408753_2408758_+ 0.921664218 0.937568071 0.929616145 0.011245756 CG45186 FBtr0345113|FBtr0345115|FBtr0345114 2408340|2408340|2408340 2409103|2409103|2409103 3L + 2408726 2408778 3'utr CG45186 FlyBase G27311.1 AATTAATTGTTAATTTGACTGCAACTTGTGCCAATGATTTTTATACGTTTACT 71 2408754 0.824988414 11 69 619 0.977777778 1.643452676 0.022222222 0.23943662 0.4 71 1 1 88 3L:2408726-2408778 6 CG45186 FBtr0345113|FBtr0345115|FBtr0345114 2408340|2408340|2408340 2409103|2409103|2409103 GTGCCA 6mer3-8 dme-miR-263a-5p 3L + 2408696 2408771 3'utr CG45186 FlyBase G20674.1 CTTTAACACAGTTTCCTCGTTTTCCTTCTTAATTAATTGTTAATTTGACTGCAACTTGTGCCAATGATTTTTATAC 65 2408754 0.886445758 11 61 558 0.966666667 1.638489257 0 0.292307692 0.488888889 65 2 1 87 3L:2408696-2408771 6 60 1810 FBgn0266696 1930.986667 36.99 56.66666667 0.031072198 1.622060016 1.058823529 -1 -1 -1 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 2464736 2464741 + 3L_2464736_2464741_+ 0.960299463 0.962606645 0.961453054 0.001631366 CG45186 FBtr0345103|FBtr0345085|FBtr0345087|FBtr0345110|FBtr0345092|FBtr0345111|FBtr0345100|FBtr0345094|FBtr0345099|FBtr0345096|FBtr0345109|FBtr0345088|FBtr0345102|FBtr0345095 2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302 2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849 3L + 2464713 2464762 3'utr CG45186 FlyBase G27342.1 TTATTTACATTTAAAAACGAATTGTACCTTAAACGGAATTATATTATGAT 276 2464735 0.772560124 8 269 1579 0.968299712 2.049218023 0.18443804 0.195652174 0.360230548 276 9 2 336 3L:2464713-2464762 6 CG45186 FBtr0345099|FBtr0345087|FBtr0345110|FBtr0345094|FBtr0345103|FBtr0345109|FBtr0345095|FBtr0345092|FBtr0345100|FBtr0345088|FBtr0345111|FBtr0345102|FBtr0345085|FBtr0345096 2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302 2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 2464715 2464800 3'utr CG45186 FlyBase G20700.1 ATTTACATTTAAAAACGAATTGTACCTTAAACGGAATTATATTATGATGAGTATGTATTACATTTATTATTATTATTGTAATATTT 181 2464735 0.966755891 7 180 978 0.996363636 2.437750563 0.250909091 0.397790055 0.603636364 181 1 0 274 3L:2464715-2464800 6 222.5 1811 FBgn0266696 1930.986667 36.99 56.66666667 0.115226068 6.015139227 3.926470588 1 1 1 0.2 dme-miR-263a-5p 7mer-m8 GTGCCAT 3L 2492103 2492109 + 3L_2492103_2492109_+ 0.658999005 0.658998482 0.658998744 3.54E-07 CG1146 FBtr0344219|FBtr0072921|FBtr0072923|FBtr0072922 2492069|2492069|2492069|2492069 2492613|2492613|2492613|2492613 3L + 2492089 2492160 3'utr CG1146 FlyBase G27354.1 AGGAACGTTTTATAGTGCCATCCCCCAGGGTCAGATGGAACAACCAGGTGAACTCCCATCCCAACCAGGCAT 35 2492107 0.807531554 7 33 140 0.953488372 1.612783857 0.186046512 0.228571429 0.372093023 35 2 0 41 3L:2492089-2492160 7 CG1146 FBtr0072923|FBtr0072922|FBtr0344219|FBtr0072921 2492069|2492069|2492069|2492069 2492613|2492613|2492613|2492613 GTGCCAT 7mer-m8 dme-miR-263a-5p 3L + 2492088 2492124 3'utr CG1146 FlyBase G20706.1 AAGGAACGTTTTATAGTGCCATCCCCCAGGGTCAGAT 13 2492106 0.802836265 3 13 66 1 1.322219295 0.285714286 0.461538462 0.666666667 13 0 0 21 3L:2492088-2492124 7 17 1812 FBgn0035346 752.39 49.49 76.20666667 0.022594665 0.343503738 0.223077596 -4 -3 -3.5 0.2 dme-miR-995-5p 6mer2-7 ATTCGG 3L 2498923 2498928 + 3L_2498923_2498928_+ 0.490388863 0.503071741 0.496730302 0.008968094 CG45186 FBtr0345104|FBtr0345105|FBtr0345107|FBtr0345112|FBtr0345108|FBtr0345106 2498644|2498644|2498644|2498644|2498644|2498644 2499226|2499226|2499226|2499226|2499226|2499226 3L + 2498915 2498990 3'utr CG45186 FlyBase G27366.1 CTCGCTTCATTCGGTAGCTGTGCGGAGTTTGGAGTTCTTCTATTATATCGTATACCTGTACATAATATTAAGTTGA 23 2498925 0.83496995 6 20 226 0.9 1.130333768 0.2 0.217391304 0.4 23 2 1 27 3L:2498915-2498990 6 CG45186 FBtr0345112|FBtr0345107|FBtr0345105|FBtr0345104|FBtr0345106|FBtr0345108 2498644|2498644|2498644|2498644|2498644|2498644 2499226|2499226|2499226|2499226|2499226|2499226 ATTCGG 6mer2-7 dme-miR-995-5p 3L + 2498867 2498946 3'utr CG45186 FlyBase G20714.1 ATGTAACGACTACTATGCAAGTGCACGATGCCAGGCAATAAATTTCAACTCGCTTCATTCGGTAGCTGTGCGGAGTTTGG 9 2498925 0.981991616 7 8 61 0.857142857 0.602059991 0.428571429 0.555555556 0.714285714 9 0 2 12 3L:2498867-2498946 6 7 1813 FBgn0266696 1930.986667 36.99 56.66666667 0.00362509 0.189240335 0.123529412 -2 -2 -2 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 3L 2498967 2498972 + 3L_2498967_2498972_+ 0.509855401 0.977913815 0.743884608 0.330967269 CG45186 FBtr0345104|FBtr0345105|FBtr0345107|FBtr0345112|FBtr0345108|FBtr0345106 2498644|2498644|2498644|2498644|2498644|2498644 2499226|2499226|2499226|2499226|2499226|2499226 3L + 2498915 2498990 3'utr CG45186 FlyBase G27366.1 CTCGCTTCATTCGGTAGCTGTGCGGAGTTTGGAGTTCTTCTATTATATCGTATACCTGTACATAATATTAAGTTGA 23 2498965 0.83496995 6 20 226 0.9 1.130333768 0.2 0.217391304 0.4 23 2 1 27 3L:2498915-2498990 6 CG45186 FBtr0345112|FBtr0345107|FBtr0345105|FBtr0345104|FBtr0345106|FBtr0345108 2498644|2498644|2498644|2498644|2498644|2498644 2499226|2499226|2499226|2499226|2499226|2499226 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 3L + 2498955 2498987 3'utr CG45186 FlyBase G20715.1 TATTATATCGTATACCTGTACATAATATTAAGT 5 2498965 0.793788746 2 5 49 1 1.041392685 0 0.4 0.727272727 5 0 0 11 3L:2498955-2498987 6 9 1814 FBgn0266696 1930.986667 36.99 56.66666667 0.00466083 0.243309002 0.158823529 2 2 2 0.2 dme-miR-79-3p 8mer-A1 TAGCTTTA 3L 2507173 2507180 - 3L_2507173_2507180_- 0.622849032 0.623497125 0.623173079 0.000458276 Spn FBtr0304620|FBtr0304614|FBtr0304619 2506569|2505243|2505243 2508306|2508306|2508306 3L - 2507159 2507248 3'utr Spn FlyBase G33690.1 GGAAGCAAGCAGCTTCAAGAGCGATTTCTATTCGTTAGCAAGTATGTCTGTGTGAATGGGCGTGATTGTAGCTTTAATTTCAATTTACTT 161 2507182 0.825294478 11 156 1527 0.972972973 1.653212514 0.324324324 0.124223602 0.237837838 161 2 3 180 3L:2507159-2507248 8 Spn FBtr0304619|FBtr0304614|FBtr0304620 2505243|2505243|2506569 2508306|2508306|2508306 TAGCTTTA 8mer-A1 dme-miR-79-3p 3L - 2507158 2507246 3'utr Spn FlyBase G25473.3 AAGCAAGCAGCTTCAAGAGCGATTTCTATTCGTTAGCAAGTATGTCTGTGTGAATGGGCGTGATTGTAGCTTTAATTTCAATTTACTTT 124 2507182 0.797884509 15 122 1181 0.985221675 2 0.325123153 0.475806452 0.679802956 124 2 1 200 3L:2507158-2507246 8 89.5 1815 FBgn0010905 2101.51 31.02666667 47.43666667 0.042588425 2.884615385 1.886726161 2 2 2 0.2 dme-miR-33-5p 8mer-A1 CAATGCAA 3L 2507289 2507296 - 3L_2507289_2507296_- 0.601738734 0.601106549 0.601422641 0.000447033 Spn FBtr0304620|FBtr0304614|FBtr0304619 2506569|2505243|2505243 2508306|2508306|2508306 3L - 2507265 2507316 3'utr Spn FlyBase G33691.1 AGCAGTTTCAGCAGCCAAATCAATGCAAAGTGTCCACCCAAATTTGTTAAGC 148 2507297 0.962321248 3 144 624 0.976744186 2.225309282 0.081395349 0.135135135 0.255813953 148 4 0 168 3L:2507265-2507316 8 Spn FBtr0304619|FBtr0304614|FBtr0304620 2505243|2505243|2506569 2508306|2508306|2508306 CAATGCAA 8mer-A1 dme-miR-33-5p 3L - 2507270 2507340 3'utr Spn FlyBase G25474.1 TGAAATGCAGTCGGTTACATTTCGAGCAGTTTCAGCAGCCAAATCAATGCAAAGTGTCCACCCAAATTTGT 59 2507297 0.945031464 5 55 225 0.954022989 1.441956838 0.057471264 0.406779661 0.597701149 59 2 2 83 3L:2507270-2507340 8 102 1816 FBgn0010905 2101.51 31.02666667 47.43666667 0.048536528 3.287494628 2.150235402 1 1 1 0.2 dme-miR-317-5p 6mer2-7 TATCCC 3L 2507473 2507478 - 3L_2507473_2507478_- 0.998517297 0.992351606 0.995434452 0.004359808 Spn FBtr0304620|FBtr0304614|FBtr0304619 2506569|2505243|2505243 2508306|2508306|2508306 3L - 2507464 2507494 3'utr Spn FlyBase G33693.1 ACGGAACGTACTGTACTATCCCCTAAAAATT 14 2507481 0.58831537 5 14 71 1 1.255272505 0.222222222 0.214285714 0.388888889 14 0 0 18 3L:2507464-2507494 6 Spn FBtr0304619|FBtr0304614|FBtr0304620 2505243|2505243|2506569 2508306|2508306|2508306 TATCCC 6mer2-7 dme-miR-317-5p 3L - 2507416 2507497 3'utr Spn FlyBase G25475.1 TTTACGGAACGTACTGTACTATCCCCTAAAAATTAATGCTAAAGTATTGTACTGTATGCTATGCCTGAAAGTCATTTAAGTA 17 2507477 0.868674496 10 16 115 0.956521739 1.342422681 0.173913043 0.235294118 0.434782609 17 1 0 22 3L:2507416-2507497 6 10.5 1817 FBgn0010905 2101.51 31.02666667 47.43666667 0.004996407 0.338418565 0.221347762 3 -1 1 0.2 dme-miR-1012-3p 6mer2-7 TGACTA 3L 2507570 2507575 - 3L_2507570_2507575_- 0.787852764 0.999541744 0.893697254 0.149686657 Spn FBtr0304620|FBtr0304614|FBtr0304619 2506569|2505243|2505243 2508306|2508306|2508306 3L - 2507498 2507575 3'utr Spn FlyBase G33694.1 TGACTAGCGCATATTCAATAATATTCAATTCTAGATATACATATACATATGTGTGTGCAACAGTTATATGTCAAGACA 9 2507554 0.990493938 6 8 77 0.888888889 0.903089987 0 0 0 9 1 0 8 3L:2507498-2507575 6 Spn FBtr0304619|FBtr0304614|FBtr0304620 2505243|2505243|2506569 2508306|2508306|2508306 TGACTA 6mer2-7 dme-miR-1012-3p 3L - 2507537 2507597 3'utr Spn FlyBase G25476.1 ATTATTAATCTGTGTAATTTAATGACTAGCGCATATTCAATAATATTCAATTCTAGATATA 9 2507575 0.986858617 5 8 74 0.933333333 1.146128036 0.133333333 0.333333333 0.6 9 1 0 14 3L:2507537-2507597 6 3.5 1818 FBgn0010905 2101.51 31.02666667 47.43666667 0.001665469 0.112806188 0.073782587 -21 0 -10.5 0.2 dme-miR-8-3p 6mer3-8 CAGTAT 3L 2508251 2508256 - 3L_2508251_2508256_- 0.959423381 0.988060974 0.973742178 0.020249841 Spn FBtr0304617|FBtr0345046|FBtr0304613|FBtr0304620|FBtr0304618|FBtr0304616|FBtr0304615|FBtr0304621|FBtr0304614|FBtr0304619|FBtr0345047 2508045|2508045|2508045|2506569|2508045|2508045|2508045|2508045|2505243|2505243|2508045 2509405|2508306|2508306|2508306|2508306|2508306|2508306|2508306|2508306|2508306|2508306 3L - 2508214 2508308 stop_codon Spn FlyBase G33699.1 AGTTGAATTCTAGTTGATAAGCATCAAAGTAGCCAAAAACCAAAAGCATACGCAGTATATATTGTAGTCTATATACATACATGCATACACAACAC 30 2508260 0.97581507 12 29 188 0.971428571 1.531478917 0.057142857 0.166666667 0.285714286 30 1 0 34 3L:2508214-2508308 6 Spn FBtr0304619|FBtr0345047|FBtr0304621|FBtr0304614|FBtr0304620|FBtr0304618|FBtr0304617|FBtr0304616|FBtr0304615|FBtr0345046|FBtr0304613 2505243|2508045|2508045|2505243|2506569|2508045|2508045|2508045|2508045|2508045|2508045 2508306|2508306|2508306|2508306|2508306|2508306|2509405|2508306|2508306|2508306|2508306 CAGTAT 6mer3-8 dme-miR-8-3p 3L - 2508213 2508306 5'utr Spn FlyBase G25481.1 TTGAATTCTAGTTGATAAGCATCAAAGTAGCCAAAAACCAAAAGCATACGCAGTATATATTGTAGTCTATATACATACATGCATACACAACACA 16 2508246 0.976267093 10 14 89 0.782608696 1.255272505 0.043478261 0.375 0.565217391 16 5 0 18 3L:2508213-2508306 6 15.5 1819 FBgn0010905 2101.51 31.02666667 47.43666667 0.007375649 0.499570262 0.326751458 4 -10 -3 0.2 dme-miR-283-5p 6mer3-8 TGATAT 3L 25115033 25115038 - 3L_25115033_25115038_- 0.999979081 0.999574895 0.999776988 0.000285813 MED21 FBtr0113739|FBtr0113740 25114922|25114922 25115218|25115218 3L - 25114923 25115180 3'utr MED21 FlyBase G39507.1 AAATTTAAGATAATGTATTTATTGCATTTTCGTTCGTGTTTACAGATCAAATGGGTTTTAGTATATACATATTGTTTTTATAAGTAAAGTATTTTAGCTTAATTTAGACCTAAACCATTTTGAACAGCACCTCTGACCTCGTTGATATAATTTTTATAATAATTAATTATAGTTTTAAGTTATAAAAAAAACTATATATACTTACACGTACCCCACTTTGGATTTTATGAACAAATTAAATTTATGTGCTCTAAAATA 233 25115047 0.985169696 44 212 1731 0.918149466 1.809559715 0.149466192 0.175965665 0.316725979 233 20 3 258 3L:25114923-25115180 6 MED21 FBtr0113740|FBtr0113739 25114922|25114922 25115218|25115218 TGATAT 6mer3-8 dme-miR-283-5p 3L - 25115017 25115176 3'utr MED21 FlyBase G29845.1 TTAAGATAATGTATTTATTGCATTTTCGTTCGTGTTTACAGATCAAATGGGTTTTAGTATATACATATTGTTTTTATAAGTAAAGTATTTTAGCTTAATTTAGACCTAAACCATTTTGAACAGCACCTCTGACCTCGTTGATATAATTTTTATAATAATT 141 25115047 0.725898796 26 133 967 0.9543379 1.475048246 0.210045662 0.34751773 0.579908676 141 4 6 209 3L:25115017-25115176 6 117.5 1820 FBgn0040020 302.5833333 44.85333333 68.74333333 0.388322776 2.619649227 1.709256655 9 9 9 0.2 "dme-miR-995-3p,dme-miR-998-3p" 6mer2-7 GGTGCT 3L 25115050 25115055 + 3L_25115050_25115055_+ 0.999334131 0.99426265 0.99679839 0.003586021 Set1 FBtr0302246|FBtr0113871|FBtr0113870|FBtr0302245|FBtr0302243|FBtr0302248|FBtr0302247|FBtr0302244|FBtr0113869 25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896 25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180 3L + 25115002 25115088 3'utr Set1 FlyBase G32671.1 CTTAAAACTATAATTAATTATTATAAAAATTATATCAACGAGGTCAGAGGTGCTGTTCAAAATGGTTTAGGTCTAAATTAAGCTAAA 31 25115056 0.978840637 12 30 203 0.970588235 1.51851394 0.235294118 0.096774194 0.176470588 31 1 0 33 3L:25115002-25115088 6 Set1 FBtr0302248|FBtr0302247|FBtr0302244|FBtr0113869|FBtr0302246|FBtr0113870|FBtr0113871|FBtr0302245|FBtr0302243 25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896 25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180 GGTGCT 6mer2-7 "dme-miR-995-3p,dme-miR-998-3p" 3L + 25115023 25115089 3'utr Set1 FlyBase G24703.1 TATAAAAATTATATCAACGAGGTCAGAGGTGCTGTTCAAAATGGTTTAGGTCTAAATTAAGCTAAAA 31 25115054 0.702702687 11 27 162 0.88 1.342422681 0.26 0.451612903 0.66 31 5 1 44 3L:25115023-25115089 6 21 1821 FBgn0040022 1603.58 36.14666667 55.41666667 0.013095698 0.580966433 0.378947368 -6 -4 -5 0.2 dme-bantam-3p 6mer3-8 TGATCT 3L 25115132 25115137 + 3L_25115132_25115137_+ 0.995317494 0.991465831 0.993391662 0.002723563 Set1 FBtr0302246|FBtr0113871|FBtr0113870|FBtr0302245|FBtr0302243|FBtr0302248|FBtr0302247|FBtr0302244|FBtr0113869 25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896 25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180 3L + 25115100 25115180 3'utr Set1 FlyBase G32672.1 ATAAAAACAATATGTATATACTAAAACCCATTTGATCTGTAAACACGAACGAAAATGCAATAAATACATTATCTTAAATTT 124 25115131 0.755210737 15 121 710 0.966666667 2.161368002 0.06 0.177419355 0.32 124 5 0 145 3L:25115100-25115180 6 Set1 FBtr0302248|FBtr0302247|FBtr0302244|FBtr0113869|FBtr0302246|FBtr0113870|FBtr0113871|FBtr0302245|FBtr0302243 25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896 25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180 TGATCT 6mer3-8 dme-bantam-3p 3L + 25115108 25115166 3'utr Set1 FlyBase G24704.1 AATATGTATATACTAAAACCCATTTGATCTGTAAACACGAACGAAAATGCAATAAATAC 105 25115131 0.99295358 6 103 573 0.986842105 1.875061263 0.059210526 0.361904762 0.559210526 105 1 1 150 3L:25115108-25115166 6 102 1822 FBgn0040022 1603.58 36.14666667 55.41666667 0.063607678 2.821836961 1.840601504 1 1 1 0.2 dme-miR-999-3p 6mer3-8 AGTTAA 3L 2555890 2555895 - 3L_2555890_2555895_- 0.978981509 0.999777846 0.989379677 0.014705205 msn FBtr0333364|FBtr0333362|FBtr0072959|FBtr0333365|FBtr0072956|FBtr0072958|FBtr0072957|FBtr0333363 2555772|2555772|2555772|2554845|2554845|2554845|2554845|2555772 2556555|2556555|2556555|2556555|2556555|2556555|2556555|2556555 3L - 2555889 2555929 3'utr msn FlyBase G33742.1 TGTCGTTTCACGATTGTGTATGATTTCGCTTACAAGTTAAA 10 2555908 0.796792999 5 10 86 1 1.204119983 0.1875 0.4 0.625 10 0 0 16 3L:2555889-2555929 6 msn FBtr0072957|FBtr0333363|FBtr0072956|FBtr0072958|FBtr0072959|FBtr0333365|FBtr0333364|FBtr0333362 2554845|2555772|2554845|2554845|2555772|2554845|2555772|2555772 2556555|2556555|2556555|2556555|2556555|2556555|2556555|2556555 AGTTAA 6mer3-8 dme-miR-999-3p 3L - 2555877 2555937 3'utr msn FlyBase G25511.1 ATTTCAAATGTCGTTTCACGATTGTGTATGATTTCGCTTACAAGTTAAACTTAAGTTGAAA 13 2555908 0.70765889 7 12 118 1 1.278753601 0.157894737 0.384615385 0.578947368 13 0 0 19 3L:2555877-2555937 6 2.5 1823 FBgn0010909 7320.6 159.8166667 245.3066667 0.000341502 0.015642924 0.010191325 13 13 13 0.2 dme-miR-33-5p 8mer-A1 CAATGCAA 3L 2595437 2595444 + 3L_2595437_2595444_+ 0.634528493 0.585739948 0.610134221 0.03449875 dos FBtr0072926|FBtr0072927 2595045|2595045 2595590|2595590 3L + 2595284 2595471 3'utr dos FlyBase G27392.1 ATTTCTGTGTGCTGTTTTGAATCTGTAATCTGTAACCCGTATCTGAATCTATGTCGTATTCGTATTTAAATCGTGCTTCCAACACTTCCATGTTTATTGTTAAGCTTCGGAATCAAAATGTAACCATGACAAACGATCTTAGTGCTAATTTTACAATGCAAACAATTATTTTATATACGCAAGCGAAA 142 2595424 0.884786622 36 132 1197 0.933333333 1.447158031 0.116666667 0.225352113 0.388888889 142 7 5 168 3L:2595284-2595471 8 dos FBtr0072926|FBtr0072927 2595045|2595045 2595590|2595590 CAATGCAA 8mer-A1 dme-miR-33-5p 3L + 2595373 2595472 3'utr dos FlyBase G20739.2 ATGTTTATTGTTAAGCTTCGGAATCAAAATGTAACCATGACAAACGATCTTAGTGCTAATTTTACAATGCAAACAATTATTTTATATACGCAAGCGAAAT 49 2595425 0.711057503 18 44 309 0.941176471 1.329058719 0.088235294 0.285714286 0.485294118 49 2 2 64 3L:2595373-2595472 8 12.5 1824 FBgn0016794 1172.68 41.23 62.95666667 0.010659344 0.303177298 0.198549267 13 12 12.5 0.2 dme-miR-79-3p 6mer3-8 TAGCTT 3L 2595548 2595553 + 3L_2595548_2595553_+ 0.837610069 0.981980181 0.909795125 0.102085077 dos FBtr0072926|FBtr0072927 2595045|2595045 2595590|2595590 3L + 2595491 2595587 3'utr dos FlyBase G27393.1 TATATGGTAACAAATTATTTACAATTTAATAATGTAACTCGTGTGCGACACAAGCTGTAGCTTGATTTTGTGCTTTAAAAAATATATATACAATAAT 40 2595559 0.986557692 13 40 349 1 1.698970004 0.06 0.125 0.3 40 0 0 50 3L:2595491-2595587 6 dos FBtr0072926|FBtr0072927 2595045|2595045 2595590|2595590 TAGCTT 6mer3-8 dme-miR-79-3p 3L + 2595513 2595600 3'utr dos FlyBase G20740.1 AATTTAATAATGTAACTCGTGTGCGACACAAGCTGTAGCTTGATTTTGTGCTTTAAAAAATATATATACAATAATACCAATTTTGTGT 24 2595559 0.987019227 10 24 208 1 1.491361694 0.161290323 0.291666667 0.451612903 24 0 0 31 3L:2595513-2595600 6 23 1825 FBgn0016794 1172.68 41.23 62.95666667 0.019613194 0.557846228 0.365330651 -11 -11 -11 0.2 dme-bantam-3p 6mer2-7 GATCTC 3L 26226162 26226167 + 3L_26226162_26226167_+ 0.54470516 0.977715811 0.761210485 0.306184732 CG40160 FBtr0333380 26225913 26229433 3L + 26226131 26226182 3'utr CG40160 FlyBase G32715.1 GAAAACGAGTCTGTGTATATTACAAAATTGAGATCTCTGGAACTATAAAGGT 11 26226168 0.97818973 3 10 67 0.923076923 1.079181246 0.076923077 0.181818182 0.307692308 11 1 0 12 3L:26226131-26226182 6 CG40160 FBtr0333380 26225913 26229433 GATCTC 6mer2-7 dme-bantam-3p 3L + 26226152 26226177 3'utr CG40160 FlyBase G24741.1 ACAAAATTGAGATCTCTGGAACTATA 5 26226168 0.662444302 2 5 25 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3L:26226152-26226177 6 7.5 1826 FBgn0058160 1218.203333 81.38333333 124.1133333 0.006156608 0.092156461 0.06042864 -6 -6 -6 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 2641033 2641038 + 3L_2641033_2641038_+ 0.654211425 0.660286353 0.657248889 0.004295674 MEP-1 FBtr0072931|FBtr0072933|FBtr0290340|FBtr0072936|FBtr0072934|FBtr0072932|FBtr0072935 2641015|2641015|2641015|2641015|2641015|2641015|2641015 2641984|2641984|2641984|2641984|2641984|2641984|2641984 3L + 2641014 2641143 stop_codon MEP-1 FlyBase G27420.1 TAAAGAGCATGTTGGATCAACCAAAAACCTAATCTCGCAACGTTTGCAGCATTGACAGCGCTTTAACATTAGTTTCGTTTTTAAGCCGAACGCGACATTGGCGCCTCACGGTCCCGCTCCTTTACTTCTG 69 2641043 0.825875524 18 63 353 0.914634146 1.273001272 0.073170732 0.130434783 0.268292683 69 4 3 75 3L:2641014-2641143 6 MEP-1 FBtr0072935|FBtr0072932|FBtr0072934|FBtr0072936|FBtr0290340|FBtr0072933|FBtr0072931 2641015|2641015|2641015|2641015|2641015|2641015|2641015 2641984|2641984|2641984|2641984|2641984|2641984|2641984 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 2641010 2641088 stop_codon MEP-1 FlyBase G20763.1 AGATTAAAGAGCATGTTGGATCAACCAAAAACCTAATCTCGCAACGTTTGCAGCATTGACAGCGCTTTAACATTAGTTT 21 2641057 0.957728059 10 19 106 0.9375 1.477121255 0.15625 0.333333333 0.5625 21 2 0 30 3L:2641010-2641088 6 23.5 1827 FBgn0035357 2000.076667 48.38333333 74.09333333 0.01174955 0.485704444 0.317167536 -10 -24 -17 0.2 dme-miR-1012-3p 6mer2-7 TGACTA 3L 2641496 2641501 + 3L_2641496_2641501_+ 0.971933206 0.816699558 0.894316382 0.109766731 MEP-1 FBtr0072931|FBtr0072933|FBtr0290340|FBtr0072936|FBtr0072934|FBtr0072932|FBtr0072935 2641015|2641015|2641015|2641015|2641015|2641015|2641015 2641984|2641984|2641984|2641984|2641984|2641984|2641984 3L + 2641430 2641520 3'utr MEP-1 FlyBase G27422.1 ACATATATATTTAACTATATTTAAAGCATATTATGAAGAAGCCGCCAGAGCGCATCGTCAGCATGATGACTATGTAAATTAGTTAAAAACT 31 2641501 0.970555489 11 28 166 0.923076923 1.255272505 0.153846154 0.161290323 0.333333333 31 2 1 36 3L:2641430-2641520 6 MEP-1 FBtr0072935|FBtr0072932|FBtr0072934|FBtr0072936|FBtr0290340|FBtr0072933|FBtr0072931 2641015|2641015|2641015|2641015|2641015|2641015|2641015 2641984|2641984|2641984|2641984|2641984|2641984|2641984 TGACTA 6mer2-7 dme-miR-1012-3p 3L + 2641281 2641509 3'utr MEP-1 FlyBase G20765.1 TCACTTGCTGCGGCTACAGGATACGCGATACACATAACGCTAACGGCATAGATTCACTAGAGATACTAGTTACGGATTTTAGTTACATACGTTTTGGAGTGTGCACATAAGTTGAAGTTGTAGCTACTACTAAAATATACCACATACATACATATATATTTAACTATATTTAAAGCATATTATGAAGAAGCCGCCAGAGCGCATCGTCAGCATGATGACTATGTAAATT 49 2641496 0.980043356 23 43 287 0.897058824 1.484299839 0.25 0.346938776 0.529411765 49 6 1 61 3L:2641281-2641509 6 16 1828 FBgn0035357 2000.076667 48.38333333 74.09333333 0.007999693 0.330692387 0.215943855 -5 0 -2.5 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 3L 2641556 2641561 + 3L_2641556_2641561_+ 0.982618073 0.98691089 0.984764481 0.003035468 MEP-1 FBtr0072931|FBtr0072933|FBtr0290340|FBtr0072936|FBtr0072934|FBtr0072932|FBtr0072935 2641015|2641015|2641015|2641015|2641015|2641015|2641015 2641984|2641984|2641984|2641984|2641984|2641984|2641984 3L + 2641526 2641602 3'utr MEP-1 FlyBase G27423.1 ATTTATACGAGAACTACGAGTATCCAAATGTGTGTTGCAGTATGTATATACATTTTGAAAAGGTCCCCGCCCCGCAG 28 2641556 0.972607606 9 27 189 1 1.544068044 0.228571429 0.214285714 0.371428571 28 0 0 35 3L:2641526-2641602 6 MEP-1 FBtr0072935|FBtr0072932|FBtr0072934|FBtr0072936|FBtr0290340|FBtr0072933|FBtr0072931 2641015|2641015|2641015|2641015|2641015|2641015|2641015 2641984|2641984|2641984|2641984|2641984|2641984|2641984 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 2641518 2641578 3'utr MEP-1 FlyBase G20765.2 ACTAAACTATTTATACGAGAACTACGAGTATCCAAATGTGTGTTGCAGTATGTATATACAT 15 2641556 0.980043341 5 13 97 0.95 1.278753601 0.15 0.214285714 0.45 14 1 0 19 3L:2641518-2641578 6 15 1829 FBgn0035357 2000.076667 48.38333333 74.09333333 0.007499713 0.310024113 0.202447364 0 0 0 0.2 dme-bantam-3p 6mer3-8 TGATCT 3L 2641735 2641740 + 3L_2641735_2641740_+ 0.711698144 0.875838692 0.793768418 0.116064931 MEP-1 FBtr0072931|FBtr0072933|FBtr0290340|FBtr0072936|FBtr0072934|FBtr0072932|FBtr0072935 2641015|2641015|2641015|2641015|2641015|2641015|2641015 2641984|2641984|2641984|2641984|2641984|2641984|2641984 3L + 2641612 2641772 3'utr MEP-1 FlyBase G27424.1 GTGCCTCGCTTCGTTCTTCTCTCGAATCTTCTAGCTTATTTGTACGAACAGTCATGATGATGATGAGGCAGAGAGGAGGAAGTTGCATGAAGCGAAGCGTGGGGGGGAAGGACTCTTCTAAACTGATCTGAGAGACGACGAGACGTTCGACATTTTAATTT 255 2641735 0.986680811 16 241 1215 0.962837838 1.977723605 0.476351351 0.133333333 0.253378378 255 9 2 285 3L:2641612-2641772 6 MEP-1 FBtr0072935|FBtr0072932|FBtr0072934|FBtr0072936|FBtr0290340|FBtr0072933|FBtr0072931 2641015|2641015|2641015|2641015|2641015|2641015|2641015 2641984|2641984|2641984|2641984|2641984|2641984|2641984 TGATCT 6mer3-8 dme-bantam-3p 3L + 2641657 2641764 3'utr MEP-1 FlyBase G20766.1 GAACAGTCATGATGATGATGAGGCAGAGAGGAGGAAGTTGCATGAAGCGAAGCGTGGGGGGGAAGGACTCTTCTAAACTGATCTGAGAGACGACGAGACGTTCGACAT 176 2641735 0.968935979 15 167 825 0.937037037 2.102090526 0.462962963 0.392045455 0.603703704 176 16 1 253 3L:2641657-2641764 6 159 1830 FBgn0035357 2000.076667 48.38333333 74.09333333 0.079496953 3.286255598 2.145942055 0 0 0 0.2 dme-miR-14-3p 6mer3-8 AAGACT 3L 265513 265518 + 3L_265513_265518_+ 0.558221468 0.952487618 0.755354543 0.278788233 mRpL17 FBtr0310415 265443 265932 3L + 265436 265533 stop_codon mRpL17 FlyBase G26746.1 GTTCACTAATAGCTCTTTTCACTAACCGCCTGTTTATTTAGTAGATTAGCAAGCAGTTTGTCGCTTAGAATTCACGTAAGACTTAAAAGCATCTTTAT 49 265512 0.981346297 10 47 343 0.964912281 1.740362689 0.087719298 0.142857143 0.263157895 49 2 0 55 3L:265436-265533 6 mRpL17 FBtr0310415|FBtr0072503 265443|265443 265932|265596 AAGACT 6mer3-8 dme-miR-14-3p 3L + 265470 265534 3'utr mRpL17 FlyBase G20223.1 TATTTAGTAGATTAGCAAGCAGTTTGTCGCTTAGAATTCACGTAAGACTTAAAAGCATCTTTATT 26 265512 0.871114006 8 25 173 1 1.505149978 0.21875 0.153846154 0.3125 26 0 0 32 3L:265470-265534 6 21.5 1831 FBgn0035122 140.4333333 18.93666667 28.89666667 0.153097555 1.135363492 0.744030453 1 1 1 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 3L 27083335 27083340 - 3L_27083335_27083340_- 0.668443203 0.605902549 0.637172876 0.044222953 CG40228 FBtr0113841 27082089 27083460 3L - 27083316 27083426 3'utr CG40228 FlyBase G39587.1 TAAATTGCTAGAGCCCTCTAAATTATACCATAAAATAAGTTTAATACAAAAAATTTAGCATAATAGCGAGATTGAAATAAACATTTTTGACTTATTAAAATAAGCTGAACC 48 27083340 0.808217654 12 44 415 0.98245614 1.447158031 0.052631579 0.14893617 0.298245614 47 0 1 56 3L:27083316-27083426 6 CG40228 FBtr0113841 27082089 27083460 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 27083302 27083378 3'utr CG40228 FlyBase G29908.1 AAAAATTTAGCATAATAGCGAGATTGAAATAAACATTTTTGACTTATTAAAATAAGCTGAACCCATGAAATTCTAAC 31 27083340 0.988977688 9 29 281 0.958333333 1.361727836 0.041666667 0.387096774 0.604166667 31 1 1 46 3L:27083302-27083378 6 31.5 1832 FBgn0063670 550.58 55.34333333 84.84333333 0.057212394 0.569174246 0.371272542 0 0 0 0.2 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA 3L 27156053 27156060 + 3L_27156053_27156060_+ 0.588134984 0.607004904 0.597569944 0.013343034 vtd FBtr0344093 27147810 27157999 3L + 27156035 27156070 3'utr vtd FlyBase G32749.1 ATGAAACCGATGAGCAATTTGAAGAACGTGTTTTAA 8 27156045 0.80493186 3 6 37 0.666666667 0.77815125 0.333333333 0.125 0.222222222 8 3 0 6 3L:27156035-27156070 8 vtd FBtr0344093 27147810 27157999 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p 3L + 27156035 27156094 3'utr vtd FlyBase G24766.1 ATGAAACCGATGAGCAATTTGAAGAACGTGTTTTAAACAAGAGAGCCGCCCACCTTTTTA 6 27156053 0.965967021 5 5 30 0.9 0.954242509 0.4 0.333333333 0.6 6 1 0 9 3L:27156035-27156094 8 5.5 1833 FBgn0260987 2370.69 125.3933333 192.4 0.00232 0.043861981 0.028586279 8 0 4 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 2718675 2718682 - 3L_2718675_2718682_- 0.388265888 0.459309459 0.423787673 0.050235411 Mrtf FBtr0306331 2717613 2719787 3L - 2718662 2718708 3'utr Mrtf FlyBase G33796.1 CGTAAAGTAGTTAAATCCTGCGGCGTGTACTTAACGCACATTTTGTA 148 2718683 0.856178598 8 142 1096 0.963636364 2.201397124 0.218181818 0.114864865 0.206060606 148 6 0 159 3L:2718662-2718708 8 Mrtf FBtr0306331 2717613 2719787 GTACTTAA 8mer-A1 dme-miR-252-5p 3L - 2718660 2718706 3'utr Mrtf FlyBase G25564.1 TAAAGTAGTTAAATCCTGCGGCGTGTACTTAACGCACATTTTGTAAC 96 2718683 0.829986631 7 96 709 1 2.193124598 0.230769231 0.46875 0.673076923 96 0 0 156 3L:2718660-2718706 8 122 1834 FBgn0052296 573.0466667 9.693333333 14.89 0.212897146 12.58596974 8.193418402 1 1 1 0.2 dme-miR-252-5p 8mer-m1 GTACTTAG 3L 2785689 2785696 + 3L_2785689_2785696_+ 0.36882854 0.443624185 0.406226363 0.052888547 pgant6 FBtr0333442|FBtr0072972|FBtr0072973 2785657|2785657|2785657 2786010|2786010|2786010 3L + 2785618 2785738 stop_codon pgant6 FlyBase G27471.1 CGCTGGACAACTACTCGCAGGACCTCGTCCTCAGCCTGTAACCGCTGCCCTGCAATAGTATCACTTGCCATGTACTTAGAACACTTCGATGTAAATAACTAGGCTAGATAGGTTGTACGGC 208 2785688 0.978281747 15 196 1318 0.947761194 1.626682466 0.063432836 0.221153846 0.395522388 208 9 5 254 3L:2785618-2785738 8 pgant6 FBtr0072973|FBtr0333442|FBtr0072972 2785657|2785657|2785657 2786010|2786010|2786010 GTACTTAG 8mer-m1 dme-miR-252-5p 3L + 2785630 2785741 stop_codon pgant6 FlyBase G20799.1 ACTCGCAGGACCTCGTCCTCAGCCTGTAACCGCTGCCCTGCAATAGTATCACTTGCCATGTACTTAGAACACTTCGATGTAAATAACTAGGCTAGATAGGTTGTACGGCCGC 139 2785688 0.885150218 11 130 817 0.937198068 2.28780173 0.033816425 0.388489209 0.589371981 139 13 0 194 3L:2785630-2785741 8 160 1835 FBgn0035375 484.66 21.71 33.32666667 0.330128337 7.369875633 4.800960192 1 1 1 0.2 dme-miR-980-3p 6mer3-8 GGCAGC 3L 2786872 2786877 - 3L_2786872_2786877_- 0.725300404 0.681838644 0.703569524 0.030732134 Tet FBtr0309120|FBtr0309118|FBtr0333880|FBtr0309119|FBtr0309117|FBtr0333881 2786205|2786485|2786205|2786485|2786205|2786485 2788549|2788549|2788549|2788549|2788549|2788549 3L - 2786797 2786955 3'utr Tet FlyBase G33824.1 AATTGTTGTATAAAACTCAATGAATAATTTGCATCCATCCAAAAGGTAACATACAATTAAAGATTAGAATGCAAATGTGGCAGCGCAACTGAATTTCAAATCAAATTAGTCTACATATACATATAAATATATTTTGCACAAAATAAAACAGAAGAGCGG 90 2786879 0.954854973 25 89 417 0.990566038 1.720159303 0.160377358 0.155555556 0.283018868 90 0 1 105 3L:2786797-2786955 6 Tet FBtr0309117|FBtr0333881|FBtr0333880|FBtr0309119|FBtr0309120|FBtr0309118 2786205|2786485|2786205|2786485|2786205|2786485 2788549|2788549|2788549|2788549|2788549|2788549 GGCAGC 6mer3-8 dme-miR-980-3p 3L - 2786849 2786936 3'utr Tet FlyBase G25576.1 ATGAATAATTTGCATCCATCCAAAAGGTAACATACAATTAAAGATTAGAATGCAAATGTGGCAGCGCAACTGAATTTCAAATCAAATT 68 2786879 0.828179218 10 61 289 0.923809524 1.50965048 0.257142857 0.411764706 0.619047619 68 6 2 97 3L:2786849-2786936 6 57.5 1836 FBgn0263392 3136.83 38.19 58.6 0.018330608 1.505629746 0.981228669 2 2 2 0.2 dme-miR-8-3p 7mer-A1 AGTATTA 3L 2787007 2787013 - 3L_2787007_2787013_- 0.817312906 0.610195382 0.713754144 0.146454189 Tet FBtr0309120|FBtr0309118|FBtr0333880|FBtr0309119|FBtr0309117|FBtr0333881 2786205|2786485|2786205|2786485|2786205|2786485 2788549|2788549|2788549|2788549|2788549|2788549 3L - 2786963 2787120 3'utr Tet FlyBase G33825.1 TATATTTATTTATGCGCAAATCGACGGCAAATAAGGGGTTTAATTCTAGTTATTATTATTTCTGCAAGATTTAGTTTGAAAAACCCAAAAAGACTCGAAACCAATCAAGTATTAAGCACTAAACAACCAACAACTAATACTAAACTTATTTGCCTAAC 147 2787016 0.977716629 23 139 870 0.950819672 1.763427994 0.092896175 0.19047619 0.349726776 147 7 2 174 3L:2786963-2787120 7 Tet FBtr0309117|FBtr0333881|FBtr0333880|FBtr0309119|FBtr0309120|FBtr0309118 2786205|2786485|2786205|2786485|2786205|2786485 2788549|2788549|2788549|2788549|2788549|2788549 AGTATTA 7mer-A1 dme-miR-8-3p 3L - 2786996 2787111 3'utr Tet FlyBase G25576.3 TTATGCGCAAATCGACGGCAAATAAGGGGTTTAATTCTAGTTATTATTATTTCTGCAAGATTTAGTTTGAAAAACCCAAAAAGACTCGAAACCAATCAAGTATTAAGCACTAAACA 80 2787016 0.942573712 15 64 432 0.831858407 1.371067862 0.123893805 0.35 0.539823009 80 16 3 94 3L:2786996-2787111 7 64.5 1837 FBgn0263392 3136.83 38.19 58.6 0.02056216 1.688923802 1.100682594 3 3 3 0.2 dme-miR-305-3p 7mer-A1 TGTGCCA 3L 2788070 2788076 - 3L_2788070_2788076_- 0.771968065 0.766521268 0.769244666 0.003851469 Tet FBtr0309120|FBtr0309118|FBtr0333880|FBtr0309119|FBtr0309117|FBtr0333881 2786205|2786485|2786205|2786485|2786205|2786485 2788549|2788549|2788549|2788549|2788549|2788549 3L - 2787963 2788094 3'utr Tet FlyBase G33832.1 TAAATGCGTTTGATTTAGTGTGCCATAGGAGGAGAATTAGAAGAGTTCCCGGAAAAAGAGTTGCAGTTGAAAGAGTACAGTTGACGCTGCCGGGCCAGAGTTGTCACCATTCCACAAGAAAATATCCCAGAT 84 2788076 0.971175122 17 81 470 0.967741935 1.954242509 0.344086022 0.071428571 0.161290323 84 3 0 90 3L:2787963-2788094 7 Tet FBtr0309117|FBtr0333881|FBtr0333880|FBtr0309119|FBtr0309120|FBtr0309118 2786205|2786485|2786205|2786485|2786205|2786485 2788549|2788549|2788549|2788549|2788549|2788549 TGTGCCA 7mer-A1 dme-miR-305-3p 3L - 2788029 2788088 3'utr Tet FlyBase G25581.2 CGTTTGATTTAGTGTGCCATAGGAGGAGAATTAGAAGAGTTCCCGGAAAAAGAGTTGCAG 37 2788076 0.965970725 7 36 220 0.96969697 1.806179974 0.5 0.594594595 0.772727273 37 2 0 64 3L:2788029-2788088 7 49 1838 FBgn0263392 3136.83 38.19 58.6 0.015620866 1.283058392 0.836177474 0 0 0 0.2 dme-miR-1008-3p 6mer3-8 AGCTGT 3L 27967276 27967281 - 3L_27967276_27967281_- 0.897120095 0.646703996 0.771912045 0.177070922 CG17514 FBtr0113748 27967242 27967330 3L - 27967269 27967317 3'utr CG17514 FlyBase G39637.1 AAATCGTTCCAAAAATATCTTGAACTCTTAAAAAATAGCTGTATTTCAA 28 27967298 0.662083248 9 27 226 0.967741935 1.176091259 0 0.107142857 0.193548387 28 0 1 30 3L:27967269-27967317 6 CG17514 FBtr0113748 27967242 27967330 AGCTGT 6mer3-8 dme-miR-1008-3p 3L - 27967270 27967311 3'utr CG17514 FlyBase G29945.1 TTCCAAAAATATCTTGAACTCTTAAAAAATAGCTGTATTTCA 12 27967298 0.68082953 6 12 85 1 1.204119983 0.0625 0.333333333 0.5 12 0 0 16 3L:27967270-27967311 6 11 1839 FBgn0039959 2964.206667 45.44666667 69.68666667 0.003710942 0.242041954 0.157849421 17 17 17 0.2 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3L 304240 304245 + 3L_304240_304245_+ 0.992504718 0.982941477 0.987723097 0.006762204 RhoGEF3 FBtr0333956|FBtr0333962|FBtr0333952 303882|303882|303882 304315|305292|305292 3L + 304219 304281 5'utr RhoGEF3 FlyBase G26760.1 ATATAAAAATGTCGCCGACTGCTAGTCTAAAATCCTGTCCATACTTGTAATTTTAGGTTACGT 166 304240 0.784507104 11 162 1013 0.98019802 2.29666519 0.04950495 0.198795181 0.341584158 166 4 0 198 3L:304219-304281 6 RhoGEF3 FBtr0333952|FBtr0333962|FBtr0333956 303882|303882|303882 305292|305292|304315 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3L + 304213 304282 5'utr RhoGEF3 FlyBase G20229.1 AGTTTTATATAAAAATGTCGCCGACTGCTAGTCTAAAATCCTGTCCATACTTGTAATTTTAGGTTACGTG 144 304240 0.764155675 9 138 859 0.966824645 2.309630167 0.037914692 0.347222222 0.55450237 144 7 0 204 3L:304213-304282 6 150 1840 FBgn0264707 2055.463333 66.05 101.8633333 0.072976247 2.271006813 1.472561275 0 0 0 0.2 dme-miR-1007-3p 6mer2-7 GAGCTT 3L 3051618 3051623 + 3L_3051618_3051623_+ 0.929254638 0.970927402 0.95009102 0.029467119 CG32485 FBtr0072985 3051513 3051765 3L + 3051479 3051637 stop_codon CG32485 FlyBase G27518.1 TACCTCATCCCCGACATCCTGCCAACGGACATGTAAGGCTTCCGCCACGAAATCAGCATCCGACGAGGCTTCTGCTAGGCGTAGACATATCTCCAAAGAGAACCGAAACCAGTACCTAAGTTTGCAAGGAGGCTTCTGAGAGCTTTTATCCAGTATAGT 52 3051614 0.954857614 13 52 241 1 1.770852012 0.338983051 0.134615385 0.237288136 52 0 0 59 3L:3051479-3051637 6 CG32485 FBtr0072985 3051513 3051765 GAGCTT 6mer2-7 dme-miR-1007-3p 3L + 3051481 3051642 stop_codon CG32485 FlyBase G20831.1 CCTCATCCCCGACATCCTGCCAACGGACATGTAAGGCTTCCGCCACGAAATCAGCATCCGACGAGGCTTCTGCTAGGCGTAGACATATCTCCAAAGAGAACCGAAACCAGTACCTAAGTTTGCAAGGAGGCTTCTGAGAGCTTTTATCCAGTATAGTACTCT 38 3051615 0.972591559 13 35 211 0.85 1.707570176 0.15 0.447368421 0.65 38 9 0 51 3L:3051481-3051642 6 15 1841 FBgn0052485 128.92 14.17333333 21.81 0.116351226 1.058325494 0.687757909 4 3 3.5 0.2 dme-miR-305-5p 8mer-m1 AGTACAAT 3L 3051708 3051715 + 3L_3051708_3051715_+ 0.568497933 0.568068257 0.568283095 0.000303773 CG32485 FBtr0072985 3051513 3051765 3L + 3051646 3051720 3'utr CG32485 FlyBase G27519.1 TGTAAATCGATGTGTTTAACAAGTTGATTGTAAAGCGTATTCTATTGGACACCACAACTATTAGTACAATGCTAA 34 3051706 0.982885938 8 30 229 0.875 1.243038049 0.05 0.147058824 0.275 34 4 1 35 3L:3051646-3051720 8 CG32485 FBtr0072985 3051513 3051765 AGTACAAT 8mer-m1 dme-miR-305-5p 3L + 3051679 3051719 3'utr CG32485 FlyBase G20832.1 AGCGTATTCTATTGGACACCACAACTATTAGTACAATGCTA 14 3051706 0.674387683 5 14 88 1 1.397940009 0 0.5 0.72 14 0 0 25 3L:3051679-3051719 8 20 1842 FBgn0052485 128.92 14.17333333 21.81 0.155134967 1.411100659 0.917010546 2 2 2 0.2 dme-bantam-3p 8mer-A1 TGATCTCA 3L 3056302 3056309 - 3L_3056302_3056309_- 0.621029349 0.623624927 0.622327138 0.001835366 CG32486 FBtr0073004 3055906 3056724 3L - 3056250 3056499 3'utr CG32486 FlyBase G33920.1 GCAGACGTAACGCGGTAGGTTGTAACCTAAGTTTAGTGTAGATTCGGCTACATTTTGTACATGAGATGAGATAGCGCCATTTTATGGAGACACCTTTCAATAGCTATGTTAACTCTACTGTTAGTGCTGGTGGCGAAATGGATACGATACGATGGACAAGACGACTGATGTGTGTTTGACTAGCGTTTAATGATCTCACAGGAAGGAGCCAGCCCACGCTAACGCGATAATACCGATAATAACCATAAAA 543 3056309 0.820477851 36 523 3349 0.963549921 2.005752329 0.272583201 0.136279926 0.256735341 543 18 5 608 3L:3056250-3056499 8 CG32486 FBtr0073004 3055906 3056724 TGATCTCA 8mer-A1 dme-bantam-3p 3L - 3056260 3056469 3'utr CG32486 FlyBase G25647.1 GTTTAGTGTAGATTCGGCTACATTTTGTACATGAGATGAGATAGCGCCATTTTATGGAGACACCTTTCAATAGCTATGTTAACTCTACTGTTAGTGCTGGTGGCGAAATGGATACGATACGATGGACAAGACGACTGATGTGTGTTTGACTAGCGTTTAATGATCTCACAGGAAGGAGCCAGCCCACGCTAACGCGATAATACCGATAAT 344 3056309 0.976287521 32 326 2093 0.955637708 1.868392503 0.210720887 0.398255814 0.617375231 344 18 6 517 3L:3056260-3056469 8 365 1843 FBgn0266918 501.6666667 25.67666667 39.09333333 0.727574751 14.21524082 9.336630286 0 0 0 0.2 dme-miR-305-3p 6mer3-8 ATGTGC 3L 3056653 3056658 - 3L_3056653_3056658_- 0.714835014 0.784246161 0.749540588 0.04908113 CG32486 FBtr0073004 3055906 3056724 3L - 3056632 3056745 stop_codon CG32486 FlyBase G33921.2 ATGTTTCTGCTGAACAAGTAGACGCTTTCGCTGCTCAGCGAACTAAGATTTTCAAATTAGCTTAAGTTTGTTGTTTCAAACTCTTGAATGTGCAAAACCTAGATATAGTTGACT 148 3056661 0.973119223 18 134 1056 0.920731707 1.701855693 0.231707317 0.101351351 0.18902439 148 11 2 151 3L:3056632-3056745 6 CG32486 FBtr0073004 3055906 3056724 ATGTGC 6mer3-8 dme-miR-305-3p 3L - 3056633 3056701 3'utr CG32486 FlyBase G25649.1 AAGATTTTCAAATTAGCTTAAGTTTGTTGTTTCAAACTCTTGAATGTGCAAAACCTAGATATAGTTGAC 58 3056660 0.804554754 6 40 444 0.677777778 1.183269844 0.266666667 0.379310345 0.6 58 26 3 61 3L:3056633-3056701 6 61 1844 FBgn0266918 501.6666667 25.67666667 39.09333333 0.121594684 2.37569778 1.560368349 3 2 2.5 0.2 dme-miR-252-5p 6mer3-8 GTACTT 3L 305714 305719 - 3L_305714_305719_- 0.774292937 0.891383058 0.832837997 0.082795274 fwd FBtr0072516 305391 306358 3L - 305697 305751 3'utr fwd FlyBase G32951.1 TTGAAATGTTTGAGTCGCTGTCCGCTGTGTTTGTACTTGCATATTTAACTAAGTA 33 305721 0.654926989 11 30 320 0.911111111 1.010723865 0.355555556 0.303030303 0.488888889 33 1 3 41 3L:305697-305751 6 fwd FBtr0072516 305391 306358 GTACTT 6mer3-8 dme-miR-252-5p 3L - 305677 305741 3'utr fwd FlyBase G24938.1 TGAGTCGCTGTCCGCTGTGTTTGTACTTGCATATTTAACTAAGTAAACGAAAAAATAAATCCCAA 22 305721 0.986996608 5 20 173 0.942857143 1.51851394 0.485714286 0.409090909 0.628571429 22 2 0 33 3L:305677-305741 6 23.5 1845 FBgn0004373 1952.316667 35.47333333 54.29333333 0.012036982 0.662469461 0.432833988 2 2 2 0.2 dme-miR-1003-3p 7mer-A1 TGTGAGA 3L 306060 306066 - 3L_306060_306066_- 0.395271502 0.598280998 0.49677625 0.143549394 fwd FBtr0072516 305391 306358 3L - 306000 306106 3'utr fwd FlyBase G32954.1 AAGAGAAAAGTGTAAATGCCGAGTGTAATTTTAGTTTGCCTGTGAGAGATCGCGAGACACTCGCTATTCCATTTTGAAATTCATAATTTACATGTACATTTGTGCAC 31 306090 0.98726957 7 28 243 0.885714286 0.792391689 0.114285714 0.129032258 0.228571429 31 0 4 31 3L:306000-306106 7 fwd FBtr0072516 305391 306358 TGTGAGA 7mer-A1 dme-miR-1003-3p 3L - 306042 306099 3'utr fwd FlyBase G24941.1 AAGTGTAAATGCCGAGTGTAATTTTAGTTTGCCTGTGAGAGATCGCGAGACACTCGCT 20 306065 0.82699994 8 17 160 0.884615385 1.06069784 0.192307692 0.25 0.423076923 20 2 1 23 3L:306042-306099 7 14.5 1846 FBgn0004373 1952.316667 35.47333333 54.29333333 0.007427074 0.408757752 0.26706778 24 -1 11.5 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3L 3090154 3090160 + 3L_3090154_3090160_+ 0.342773098 0.324393008 0.333583053 0.012996693 CG11486 FBtr0332113|FBtr0073000|FBtr0072998|FBtr0072994 3088301|3088301|3088301|3088301 3090406|3090406|3090406|3090406 3L + 3090128 3090173 3'utr CG11486 FlyBase G27541.1 AGTAGATGGTTCGTTTACCAGCTTAGTGTGATTTATACTTATTTTG 23 3090160 0.719582455 4 23 224 1 1.505149978 0.03125 0.217391304 0.4375 23 0 0 32 3L:3090128-3090173 7 CG11486 FBtr0332113|FBtr0072994|FBtr0072998|FBtr0073000 3088301|3088301|3088301|3088301 3090406|3090406|3090406|3090406 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 3090128 3090169 3'utr CG11486 FlyBase G20854.1 AGTAGATGGTTCGTTTACCAGCTTAGTGTGATTTATACTTAT 26 3090160 0.73747605 3 26 243 1 1.568201724 0 0.230769231 0.459459459 26 0 0 37 3L:3090128-3090169 7 24.5 1847 FBgn0035397 2018.183333 59.24333333 91.30666667 0.012139631 0.413548641 0.268326519 -6 -6 -6 0.2 dme-miR-14-3p 6mer3-8 AAGACT 3L 3090350 3090355 + 3L_3090350_3090355_+ 0.999886419 0.99973531 0.999810864 0.000106844 CG11486 FBtr0332113|FBtr0073000|FBtr0072998|FBtr0072994 3088301|3088301|3088301|3088301 3090406|3090406|3090406|3090406 3L + 3090328 3090370 3'utr CG11486 FlyBase G27542.1 AAATTATTGTGTACATCAACGTAAGACTAATTATTTAATTGAA 11 3090349 0.836169669 5 10 83 0.909090909 1 0.181818182 0 0 11 1 0 10 3L:3090328-3090370 6 CG11486 FBtr0332113|FBtr0072994|FBtr0072998|FBtr0073000 3088301|3088301|3088301|3088301 3090406|3090406|3090406|3090406 AAGACT 6mer3-8 dme-miR-14-3p 3L + 3090328 3090366 3'utr CG11486 FlyBase G20855.1 AAATTATTGTGTACATCAACGTAAGACTAATTATTTAAT 9 3090349 0.849205586 3 8 75 0.857142857 1.079181246 0 0.555555556 0.714285714 9 2 0 12 3L:3090328-3090366 6 9.5 1848 FBgn0035397 2018.183333 59.24333333 91.30666667 0.004707204 0.160355596 0.104044977 1 1 1 0.2 dme-miR-33-5p 7mer-m8 CAATGCA 3L 3115152 3115158 - 3L_3115152_3115158_- 0.648470337 0.630942223 0.63970628 0.012394238 prominin-like FBtr0073118|FBtr0306258 3114557|3114448 3115919|3115919 3L - 3115130 3115229 3'utr prominin-like FlyBase G33926.1 AAATATGATCCAAAATACCAAAACTGCCATTTTAATTTAGAAAAGAGCAGAGCACAGAGTTGGGAGTTATTCAATGCATTTAATGTATTTATTTTAGAAA 41 3115159 0.755576246 14 38 341 0.933333333 1.322219295 0.244444444 0.097560976 0.177777778 41 2 1 42 3L:3115130-3115229 7 prominin-like FBtr0306258|FBtr0073118 3114448|3114557 3115919|3115919 CAATGCA 7mer-m8 dme-miR-33-5p 3L - 3115138 3115224 3'utr prominin-like FlyBase G25655.1 TGATCCAAAATACCAAAACTGCCATTTTAATTTAGAAAAGAGCAGAGCACAGAGTTGGGAGTTATTCAATGCATTTAATGTATTTAT 23 3115159 0.860197531 9 23 182 1 1.579783597 0.289473684 0.391304348 0.631578947 23 0 0 38 3L:3115138-3115224 7 15.5 1849 FBgn0026189 6878.313333 173.88 267.93 0.002253459 0.089141937 0.057850931 1 1 1 0.2 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3L 3154257 3154263 + 3L_3154257_3154263_+ 0.510634321 0.57691397 0.543774145 0.046866825 BtbVII FBtr0307305|FBtr0307302|FBtr0332096|FBtr0307304 3153532|3153532|3153532|3153532 3154934|3154934|3154934|3155678 3L + 3154202 3154308 3'utr BtbVII FlyBase G27568.1 TTATTAGTGTTAATCGCGAACATCAAATGATTTGTAAGCAACTGCAGCTAAAAAGTGGTGCTGTGTGCCAGCAGCCGACACAAACCTTGCGGAATCCGCTCCATATT 24 3154228 0.973050746 10 24 140 1 1.414973348 0.153846154 0.083333333 0.153846154 24 0 0 26 3L:3154202-3154308 7 BtbVII FBtr0332096|FBtr0307304|FBtr0307302|FBtr0307305 3153532|3153532|3153532|3153532 3154934|3155678|3154934|3154934 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3L + 3154216 3154294 3'utr BtbVII FlyBase G20874.1 CGCGAACATCAAATGATTTGTAAGCAACTGCAGCTAAAAAGTGGTGCTGTGTGCCAGCAGCCGACACAAACCTTGCGGA 19 3154257 0.826023829 7 17 86 0.935483871 1.462397998 0.225806452 0.526315789 0.709677419 19 2 0 29 3L:3154216-3154294 7 10.5 1850 FBgn0263108 1294.493333 34.92 53.58666667 0.008111282 0.300687285 0.195944265 29 0 14.5 0.2 dme-miR-986-5p 6mer3-8 ATTCGA 3L 3184670 3184675 + 3L_3184670_3184675_+ 0.880136761 0.698777211 0.789456986 0.128240603 Girdin FBtr0332097|FBtr0073036|FBtr0332098|FBtr0332099|FBtr0073035 3184665|3184270|3184270|3184665|3184665 3185287|3185287|3185287|3185287|3185287 3L + 3184614 3184693 stop_codon Girdin FlyBase G27614.1 AGCGGACCGAAGACAAGAGCAATAGCATCTGGTATGAGTACGGCTGCGTCTAGATCATTCGAACAGTATACGTCCACAAC 28 3184680 0.944426751 10 28 114 1 1.505149978 0 0.142857143 0.25 28 0 0 32 3L:3184614-3184693 6 Girdin FBtr0073035|FBtr0332098|FBtr0332099|FBtr0332097|FBtr0073036 3184665|3184270|3184665|3184665|3184270 3185287|3185287|3185287|3185287|3185287 ATTCGA 6mer3-8 dme-miR-986-5p 3L + 3184639 3184693 stop_codon Girdin FlyBase G20900.1 CATCTGGTATGAGTACGGCTGCGTCTAGATCATTCGAACAGTATACGTCCACAAC 24 3184681 0.94474195 6 22 99 0.928571429 1.591064607 0.047619048 0.5 0.714285714 24 3 0 39 3L:3184639-3184693 6 24 1851 FBgn0035411 1033.61 24.37 37.36 0.02321959 0.984817398 0.642398287 -10 -11 -10.5 0.2 dme-miR-277-3p 7mer-m8 TGCATTT 3L 3184710 3184716 + 3L_3184710_3184716_+ 0.614139737 0.614784905 0.614462321 0.000456225 Girdin FBtr0332097|FBtr0073036|FBtr0332098|FBtr0332099|FBtr0073035 3184665|3184270|3184270|3184665|3184665 3185287|3185287|3185287|3185287|3185287 3L + 3184695 3184737 3'utr Girdin FlyBase G27615.1 TGAACTCGAACATAATGCATTTGCTGACGAAGTATTATTTCGT 56 3184712 0.665012073 9 54 359 0.953125 1.785329835 0.28125 0.125 0.234375 56 3 0 61 3L:3184695-3184737 7 Girdin FBtr0073035|FBtr0332098|FBtr0332099|FBtr0332097|FBtr0073036 3184665|3184270|3184665|3184665|3184270 3185287|3185287|3185287|3185287|3185287 TGCATTT 7mer-m8 dme-miR-277-3p 3L + 3184695 3184746 3'utr Girdin FlyBase G20901.1 TGAACTCGAACATAATGCATTTGCTGACGAAGTATTATTTCGTTTTAGAAAT 51 3184714 0.647639022 7 49 329 0.957746479 1.832508913 0.197183099 0.294117647 0.492957746 51 3 0 68 3L:3184695-3184746 7 52 1852 FBgn0035411 1033.61 24.37 37.36 0.050309111 2.13377103 1.391862955 -2 -4 -3 0.2 dme-miR-92b-3p 7mer-m1 TGCAATT 3L 3198044 3198050 - 3L_3198044_3198050_- 0.737270621 0.753006977 0.745138799 0.011127315 CG32276 FBtr0073107|FBtr0073106 3197861|3197861 3198320|3198320 3L - 3197946 3198111 3'utr CG32276 FlyBase G33982.1 AAGTCCATTTAAAGCATTTTGCATTAATTGATTTAACTGTAAGCTCTGCAATGTGCATTCCTGCAATTCTCTCCTAAGCAACTGAATAATGATCCCCGATCATTTATAGGCGATAAATGCATTTTTAAGATGCTTCTCGGCGCAGTTTTAAATAGTGCAAAGTGTT 51 3198054 0.983207724 16 51 389 1 1.785329835 0.049180328 0.156862745 0.295081967 51 0 0 61 3L:3197946-3198111 7 CG32276 FBtr0073106|FBtr0073107 3197861|3197861 3198320|3198320 TGCAATT 7mer-m1 dme-miR-92b-3p 3L - 3197871 3198100 3'utr CG32276 FlyBase G25695.1 AAGCATTTTGCATTAATTGATTTAACTGTAAGCTCTGCAATGTGCATTCCTGCAATTCTCTCCTAAGCAACTGAATAATGATCCCCGATCATTTATAGGCGATAAATGCATTTTTAAGATGCTTCTCGGCGCAGTTTTAAATAGTGCAAAGTGTTAAAGCGTTGTTTTCTAATGCAAAGACGAGTAGAGAAGAAACTATGAGTACATAACAATGATGAATATATGATAAT 52 3198025 0.983662081 24 48 357 0.938271605 1.880813592 0.12345679 0.384615385 0.604938272 52 5 0 76 3L:3197871-3198100 7 20.5 1853 FBgn0047135 1536 262.94 398.89 0.013346354 0.077964555 0.051392615 4 -25 -10.5 0.2 dme-miR-283-5p 6mer3-8 TGATAT 3L 3211003 3211008 + 3L_3211003_3211008_+ 0.999896913 0.987146002 0.993521457 0.009016248 gry FBtr0073042 3210992 3211348 3L + 3210983 3211031 stop_codon gry FlyBase G27647.1 AGAACAAGTAGGGATGATACTGATATAATGCCGCTTTAGTTTAAGTGTT 20 3211012 0.749163617 9 20 165 1 1.397940009 0.4 0.2 0.36 20 0 0 25 3L:3210983-3211031 6 gry FBtr0073042 3210992 3211348 TGATAT 6mer3-8 dme-miR-283-5p 3L + 3210970 3211029 stop_codon gry FlyBase G20931.1 CCTCTGAAGCAACAGAACAAGTAGGGATGATACTGATATAATGCCGCTTTAGTTTAAGTG 10 3211017 0.977659883 5 10 68 1 1.176091259 0.533333333 0.3 0.533333333 10 0 0 15 3L:3210970-3211029 6 12.5 1854 FBgn0035416 1009.253333 26.48 40.54 0.012385394 0.472054381 0.308337444 -9 -14 -11.5 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3L 3211167 3211173 + 3L_3211167_3211173_+ 0.520124824 0.521221631 0.520673227 0.000775555 gry FBtr0073042 3210992 3211348 3L + 3211110 3211287 3'utr gry FlyBase G27649.1 ACATACATAAATAACTATATATTTAGAGAGTTGCATAGCGTAATACTTGAGAGTGTGTGTGATTGTATTGTATAATGTATTGTTAAATGGGCCAAGACGCACTAGACATTATTGTTAGTTGATTACGGCGTTTTAGATAAGCAGTGCTAAGTCCTGGTCAGTACCGCAAGTTGCACAT 70 3211173 0.93764961 24 66 608 0.956521739 1.467361417 0.27173913 0.2 0.391304348 70 2 2 88 3L:3211110-3211287 7 gry FBtr0073042 3210992 3211348 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 3211128 3211277 3'utr gry FlyBase G20932.1 ATATTTAGAGAGTTGCATAGCGTAATACTTGAGAGTGTGTGTGATTGTATTGTATAATGTATTGTTAAATGGGCCAAGACGCACTAGACATTATTGTTAGTTGATTACGGCGTTTTAGATAAGCAGTGCTAAGTCCTGGTCAGTACCGCA 44 3211165 0.990940311 16 38 397 0.903225806 1.271066772 0.322580645 0.318181818 0.516129032 44 4 2 56 3L:3211128-3211277 7 38.5 1855 FBgn0035416 1009.253333 26.48 40.54 0.038147013 1.453927492 0.949679329 -6 2 -2 0.2 dme-miR-33-5p 8mer-A1 CAATGCAA 3L 3220842 3220849 + 3L_3220842_3220849_+ 0.469885239 0.490446878 0.480166059 0.014539318 CG12034 FBtr0073043 3220717 3220925 3L + 3220737 3220910 3'utr CG12034 FlyBase G27653.1 AGCTCAATGCGCATTTAAAATCCACGTGTAGCGTACTATAAGCAGCGATATATGTTTGACTAGAGTTATAGCGCTCTTACTTGATCTTTTTATTCGTGTAACCGTCAATGCAATTCCATGGTCTCTTTCTGTGTAACGTCATCCATATCCCAGGAATAATAGTTCAATAAAAGT 265 3220854 0.935713125 28 257 2399 0.973214286 2.037426498 0.044642857 0.222641509 0.386904762 265 7 2 327 3L:3220737-3220910 8 CG12034 FBtr0073043 3220717 3220925 CAATGCAA 8mer-A1 dme-miR-33-5p 3L + 3220776 3220910 3'utr CG12034 FlyBase G20935.1 AAGCAGCGATATATGTTTGACTAGAGTTATAGCGCTCTTACTTGATCTTTTTATTCGTGTAACCGTCAATGCAATTCCATGGTCTCTTTCTGTGTAACGTCATCCATATCCCAGGAATAATAGTTCAATAAAAGT 153 3220854 0.735813767 25 152 1316 0.995744681 2.369215857 0.093617021 0.405228758 0.612765957 153 1 0 234 3L:3220776-3220910 8 127 1856 FBgn0035421 132.3333333 9.493333333 14.43 0.959697733 13.37780899 8.801108801 -12 -12 -12 0.2 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3L 3232405 3232410 + 3L_3232405_3232410_+ 0.691216288 0.651251613 0.671233951 0.02825931 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3232295 3232433 intron-3'utr CG11505 FlyBase G27688.1 CAGCAGTTGCCGCTGCTCGTTAGGACGCGGAAACGAGAGCAGAGGAAGGAGAGAGCAGCAGGCGATGCTTGGACCAGTTATCATATTAGTAGGCAACGACGAAGAATGAATGGTGCATACCCTTTCTCCAGCTATATTT 222 3232405 0.965250586 14 216 1141 0.974074074 2.419955748 0.096296296 0.175675676 0.322222222 222 7 0 263 3L:3232295-3232433 6 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3L + 3232333 3232429 3'utr CG11505 FlyBase G20959.1 GCAGAGGAAGGAGAGAGCAGCAGGCGATGCTTGGACCAGTTATCATATTAGTAGGCAACGACGAAGAATGAATGGTGCATACCCTTTCTCCAGCTAT 140 3232405 0.961632127 10 138 688 0.990909091 2.338456494 0.127272727 0.392857143 0.613636364 140 2 0 218 3L:3232333-3232429 6 160.5 1857 FBgn0035424 4177.206667 52.67666667 80.83333333 0.038422806 3.046889831 1.98556701 0 0 0 0.2 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3L 3232919 3232924 + 3L_3232919_3232924_+ 0.997291606 0.988847823 0.993069715 0.005970668 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3232828 3232959 3'utr CG11505 FlyBase G27690.2 CTCATTTTTGCTTACACATCAGAACGTAATGTTTATAGCCAAAACAGAAGTACACAGATAAGAGTGCGTAGCCCACATAGCTATGTCTCTGCTAGTCTCACAGGTTAGGGTTACTTCTATTATTTAGATATA 74 3232925 0.978720204 21 72 548 0.988888889 1.949390007 0.088888889 0.148648649 0.3 74 1 0 89 3L:3232828-3232959 6 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3L + 3232837 3232943 3'utr CG11505 FlyBase G20964.1 GCTTACACATCAGAACGTAATGTTTATAGCCAAAACAGAAGTACACAGATAAGAGTGCGTAGCCCACATAGCTATGTCTCTGCTAGTCTCACAGGTTAGGGTTACTT 34 3232925 0.984246319 7 33 261 0.978723404 1.662757832 0.021276596 0.294117647 0.489361702 34 1 0 46 3L:3232837-3232943 6 37.5 1858 FBgn0035424 4177.206667 52.67666667 80.83333333 0.008977291 0.711890147 0.463917526 -6 -6 -6 0.2 dme-miR-7-5p 6mer2-7 TCTTCC 3L 3233143 3233148 + 3L_3233143_3233148_+ 0.967674517 0.960291192 0.963982854 0.005220781 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3233003 3233174 3'utr CG11505 FlyBase G27691.1 ATTGTAACATTTTAACGGATGATCTTGTTTGCGCAAGAGGGTTTTTTTTTAATTAACTTGATTATGGGGATTCTCGTACTTAGTTCACGACTTAAGGGATCCTTTACACAGACACACCTGAATACGCCTAGACTAACTTATCTTCCCCCCAGACACCGACCCGTGAATACCC 199 3233145 0.869628357 16 196 1270 0.981900452 2.336459734 0.180995475 0.095477387 0.185520362 199 4 0 217 3L:3233003-3233174 6 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 TCTTCC 6mer2-7 dme-miR-7-5p 3L + 3233109 3233171 3'utr CG11505 FlyBase G20966.1 CACAGACACACCTGAATACGCCTAGACTAACTTATCTTCCCCCCAGACACCGACCCGTGAATA 57 3233145 0.962062124 4 56 279 0.987179487 1.886490725 0.256410256 0.298245614 0.487179487 57 1 0 77 3L:3233109-3233171 6 93.5 1859 FBgn0035424 4177.206667 52.67666667 80.83333333 0.022383379 1.774979434 1.156701031 -2 -2 -2 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 3233990 3233995 + 3L_3233990_3233995_+ 0.892501656 0.880758598 0.886630127 0.008303626 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3233970 3234090 3'utr CG11505 FlyBase G27696.1 TTTCCATTCGCAACCTCACTACCAAAACGAAGAAAACCCGCGTATTATGATTATCATTCTCTTTAATTAGATGCTTATGATTATGAACCCACTGTGAACACACTGAACAATGTTTTCCCAA 42 3233987 0.842278861 13 37 219 0.888888889 1.681241237 0.074074074 0.238095238 0.407407407 42 6 0 48 3L:3233970-3234090 6 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 3233973 3234030 3'utr CG11505 FlyBase G20971.1 CCATTCGCAACCTCACTACCAAAACGAAGAAAACCCGCGTATTATGATTATCATTCTC 14 3233987 0.824402364 4 13 45 0.95 1.278753601 0.5 0.285714286 0.5 14 1 0 19 3L:3233973-3234030 6 14 1860 FBgn0035424 4177.206667 52.67666667 80.83333333 0.003351522 0.265772322 0.173195876 3 3 3 0.2 dme-miR-184-5p 7mer-A1 GATAAGA 3L 3234200 3234206 + 3L_3234200_3234206_+ 0.495610021 0.623139596 0.559374808 0.090177045 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3234188 3234231 3'utr CG11505 FlyBase G27698.1 ATATAAGAGAAGGATAAGAAAACTGAAAAATCAATATATATACA 17 3234202 0.965421836 4 17 41 1 1.361727836 0 0.352941176 0.52173913 17 0 0 23 3L:3234188-3234231 7 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 GATAAGA 7mer-A1 dme-miR-184-5p 3L + 3234185 3234230 3'utr CG11505 FlyBase G20974.1 AAAATATAAGAGAAGGATAAGAAAACTGAAAAATCAATATATATAC 15 3234202 0.918899134 5 15 40 1 1.322219295 0 0.333333333 0.523809524 15 0 0 21 3L:3234185-3234230 7 14.5 1861 FBgn0035424 4177.206667 52.67666667 80.83333333 0.003471219 0.27526419 0.179381443 -2 -2 -2 0.2 dme-miR-283-5p 8mer-A1 TGATATTA 3L 3234957 3234964 + 3L_3234957_3234964_+ 0.491206484 0.518589516 0.504898 0.019362705 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3234818 3234998 3'utr CG11505 FlyBase G27702.1 TAACACACTGTACAGTTGAACCTCAATAGGGCGGACTGCGGACTGCGCCTTAGGTGAATCAATGGATGAGGAACAGCATGTGGCCAGAGTGGAGCCAGCTGTTCGTTGGCGACGTCTCCAAGCTTCCGACAATGAGATGTGATATTATGCAATTGACAAATCATCAATTGTGTGCGACAAA 77 3234963 0.973348285 23 68 461 0.903225806 1.924279286 0.193548387 0.171052632 0.322580645 76 9 0 84 3L:3234818-3234998 8 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 TGATATTA 8mer-A1 dme-miR-283-5p 3L + 3234907 3234974 3'utr CG11505 FlyBase G20982.1 TGGAGCCAGCTGTTCGTTGGCGACGTCTCCAAGCTTCCGACAATGAGATGTGATATTATGCAATTGAC 47 3234962 0.829281749 10 43 298 0.86746988 1.079181246 0.253012048 0.425531915 0.674698795 47 6 5 72 3L:3234907-3234974 8 43.5 1862 FBgn0035424 4177.206667 52.67666667 80.83333333 0.010413658 0.825792571 0.53814433 -6 -5 -5.5 0.2 dme-miR-34-5p 8mer-A1 CACTGCCA 3L 3235651 3235658 + 3L_3235651_3235658_+ 0.67329934 0.676304998 0.674802169 0.002125351 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3235547 3235663 3'utr CG11505 FlyBase G27706.2 CCTATGGAATGTGCCCCCCAACAGACCACTGTACATACCCTTAGCTATACATTTACATTTCCGGGGGCAATTTTCTCCTGATTTCATGCGATCACCTTCTTTGGCACTGCCATCAAA 30 3235647 0.98699469 12 24 209 0.823529412 1.447158031 0.088235294 0.133333333 0.235294118 30 6 0 28 3L:3235547-3235663 8 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 CACTGCCA 8mer-A1 dme-miR-34-5p 3L + 3235603 3235663 3'utr CG11505 FlyBase G20988.1 ATTTCCGGGGGCAATTTTCTCCTGATTTCATGCGATCACCTTCTTTGGCACTGCCATCAAA 16 3235647 0.984673081 8 15 124 0.95 1.278753601 0 0.25 0.4 16 1 0 19 3L:3235603-3235663 8 11 1863 FBgn0035424 4177.206667 52.67666667 80.83333333 0.002633339 0.20882111 0.136082474 4 4 4 0.2 dme-miR-14-3p 6mer2-7 AGACTG 3L 3313345 3313350 + 3L_3313345_3313350_+ 0.999597745 0.999230588 0.999414166 0.000259579 ZnT63C FBtr0073056|FBtr0073054|FBtr0073055|FBtr0073057|FBtr0073058|FBtr0330104 3313011|3313011|3313011|3313011|3313011|3313011 3313476|3313476|3314009|3313476|3313476|3313476 3L + 3313214 3313374 stop_codon ZnT63C FlyBase G27714.1 CGGGAGCTTCAGTTGCAGGCCGAACAGCAGTATCAGGAGCAGGTGTCACCACTGAGTACCAGGAATGGCGACGAGGTGGCACTCTAATTAGGAGCCTAGTTTAACGTTAATTGTGCAAACCGCTGCAATGGAGACTGGTCTGCCATGGTGCAGCTTTCGTG 66 3313342 0.959214535 14 63 311 0.959459459 1.550228353 0.337837838 0.106060606 0.202702703 66 2 1 71 3L:3313214-3313374 6 ZnT63C FBtr0330104|FBtr0073055|FBtr0073057|FBtr0330103|FBtr0073056|FBtr0073054|FBtr0073058 3313011|3313011|3313011|3313299|3313011|3313011|3313011 3313476|3314009|3313476|3313476|3313476|3313476|3313476 AGACTG 6mer2-7 dme-miR-14-3p 3L + 3313286 3313371 stop_codon ZnT63C FlyBase G20995.1 GAGGTGGCACTCTAATTAGGAGCCTAGTTTAACGTTAATTGTGCAAACCGCTGCAATGGAGACTGGTCTGCCATGGTGCAGCTTTC 38 3313342 0.963587387 11 38 198 1 1.763427994 0.206896552 0.342105263 0.568965517 38 0 0 58 3L:3313286-3313371 6 41.5 1864 FBgn0035432 2241.986667 107.03 164.0533333 0.018510369 0.387741755 0.252966515 3 3 3 0.2 dme-bantam-3p 7mer-m8 TGATCTC 3L 3320887 3320893 + 3L_3320887_3320893_+ 0.655148549 0.651376308 0.653262428 0.002667348 CG42456 FBtr0300240 3320650 3322489 3L + 3320867 3320925 3'utr CG42456 FlyBase G27722.1 CACCATTGGCGAGGTGCGTCTGATCTCGCAGGATGACTACTTTCTGCCCGTGGAGGACA 14 3320886 0.735583011 7 12 66 0.882352941 1.176091259 0.588235294 0.142857143 0.294117647 14 2 0 15 3L:3320867-3320925 7 CG42456 FBtr0300240 3320650 3322489 TGATCTC 7mer-m8 dme-bantam-3p 3L + 3320870 3320924 3'utr CG42456 FlyBase G21003.1 CATTGGCGAGGTGCGTCTGATCTCGCAGGATGACTACTTTCTGCCCGTGGAGGAC 6 3320887 0.976263188 3 6 33 1 0.77815125 0.166666667 0 0 6 0 0 6 3L:3320870-3320924 7 6.5 1865 FBgn0259933 101.7866667 5.366666667 8.34 0.063859052 1.211180124 0.779376499 1 0 0.5 0.2 dme-miR-1008-3p 7mer-m8 AGCTGTG 3L 3322226 3322232 + 3L_3322226_3322232_+ 0.671123182 0.671336456 0.671229819 0.000150826 CG42456 FBtr0300240 3320650 3322489 3L + 3322137 3322255 3'utr CG42456 FlyBase G27726.1 GTTATTATGGGTGACATGGTCTCTCTTGTGGAGAATGCTCTTGTAACCAGATTGTGAAATGAAGAAACTCGGTTCAGGAATTCATATTTAGCTGTGCTAACTATTATATTGTATTGTTT 147 3322224 0.820435875 21 142 1328 0.963636364 1.900367129 0.248484848 0.102040816 0.2 147 5 1 159 3L:3322137-3322255 7 CG42456 FBtr0300240 3320650 3322489 AGCTGTG 7mer-m8 dme-miR-1008-3p 3L + 3322136 3322247 3'utr CG42456 FlyBase G21005.1 AGTTATTATGGGTGACATGGTCTCTCTTGTGGAGAATGCTCTTGTAACCAGATTGTGAAATGAAGAAACTCGGTTCAGGAATTCATATTTAGCTGTGCTAACTATTATATTG 101 3322224 0.799609662 20 96 880 0.953642384 2.158362492 0.231788079 0.356435644 0.569536424 101 7 0 144 3L:3322136-3322247 7 69.5 1866 FBgn0259933 101.7866667 5.366666667 8.34 0.682800629 12.95031056 8.333333333 2 2 2 0.2 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 3370478 3370485 - 3L_3370478_3370485_- 0.584062421 0.634472672 0.609267546 0.035645465 YT521-B FBtr0073078 3370449 3371600 3L - 3370450 3370507 3'utr YT521-B FlyBase G34049.1 TGCACGAAGAAACTTAGAGAGAAAGACTGATGCCTAATAAAGACTCAAGCTGATTGCA 87 3370477 0.757700146 7 84 339 0.963302752 1.720159303 0.128440367 0.206896552 0.366972477 87 3 1 105 3L:3370450-3370507 8 YT521-B FBtr0073078 3370449 3371600 AAGACTGA 8mer-A1 dme-miR-14-3p 3L - 3370455 3370508 3'utr YT521-B FlyBase G25745.1 TTGCACGAAGAAACTTAGAGAGAAAGACTGATGCCTAATAAAGACTCAAGCTGA 75 3370494 0.904162336 5 65 274 0.87037037 1.672097858 0.231481481 0.32 0.527777778 75 13 1 94 3L:3370455-3370508 8 76 1867 FBgn0027616 901.75 38.03333333 58.06666667 0.084280566 1.998247152 1.308840413 -8 9 0.5 0.2 dme-miR-33-5p 7mer-A1 AATGCAA 3L 3401899 3401905 - 3L_3401899_3401905_- 0.524004767 0.749768188 0.636886478 0.159638831 sty FBtr0073145 3401151 3402955 3L - 3401862 3402226 3'utr sty FlyBase G34066.2 ATTGATATGTGTATGTGTGTGTATGTTGAGGGCGACGAACTTTTCGATAAATTTAGAGCAACCTATATAGACCAGTCTAAATGTGCTTAGAAACCGATATAGATGTACTGCAAACCAAAAGTCAGTTAGTTTACTTTACCAACTACGAAGCCGGAACAAATCTGAGGAGCGAAAATATGGGATAACGAAATCGATTGCTTATGAACTTATTTTATAGTTGAAGATCGATTGGTGGGTTCGTAGTGTTTCCAGCCAGAAGCCCCAAAAATGTGAGCAAGATTGTATATATGATGAAATTTTTAAGCGAAATGCGAGATACAAAATGCAAGCAAATTCCAAATAATAGAAAAACAAAAAACAACAAA 465 3401893 0.96140427 56 446 2218 0.95840868 1.87917783 0.283905967 0.169892473 0.30198915 465 17 6 530 3L:3401862-3402226 7 sty FBtr0073145 3401151 3402955 AATGCAA 7mer-A1 dme-miR-33-5p 3L - 3401866 3402096 3'utr sty FlyBase G25761.1 TTACTTTACCAACTACGAAGCCGGAACAAATCTGAGGAGCGAAAATATGGGATAACGAAATCGATTGCTTATGAACTTATTTTATAGTTGAAGATCGATTGGTGGGTTCGTAGTGTTTCCAGCCAGAAGCCCCAAAAATGTGAGCAAGATTGTATATATGATGAAATTTTTAAGCGAAATGCGAGATACAAAATGCAAGCAAATTCCAAATAATAGAAAAACAAAAAACAA 306 3401893 0.961620028 41 283 1416 0.940042827 1.943494516 0.331905782 0.379084967 0.593147752 306 24 4 439 3L:3401866-3402096 7 156.5 1868 FBgn0014388 33951.58333 1097.95 1702.483333 0.004609505 0.142538367 0.091924542 -12 -12 -12 0.2 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 3468272 3468277 - 3L_3468272_3468277_- 0.995778632 0.999305075 0.997541853 0.002493612 CG14971 FBtr0073143 3468021 3468780 3L - 3468234 3468302 3'utr CG14971 FlyBase G34136.1 AGAAAGCCTTAATGACCCTTTCATTGTTCCTTAACTGACATCTTTAATTTGGCATTCCAAATTGAATTG 25 3468278 0.985077068 10 23 249 0.925925926 1.397940009 0 0.08 0.148148148 25 2 0 25 3L:3468234-3468302 6 CG14971 FBtr0073143 3468021 3468780 GTTCCT 6mer2-7 dme-miR-276a-3p 3L - 3468240 3468318 3'utr CG14971 FlyBase G25817.1 AACCTATGTAAAAATAAGAAAGCCTTAATGACCCTTTCATTGTTCCTTAACTGACATCTTTAATTTGGCATTCCAAATT 23 3468279 0.988176474 10 22 206 0.939393939 1.014240439 0.03030303 0.347826087 0.545454545 23 0 2 31 3L:3468240-3468318 6 18.5 1869 FBgn0035449 481.2366667 24.29333333 37.37 0.038442624 0.761525796 0.495049505 1 2 1.5 0.2 dme-miR-184-3p 6mer3-8 TCCGTC 3L 3468626 3468631 - 3L_3468626_3468631_- 0.993907959 0.999260729 0.996584344 0.00378493 CG14971 FBtr0073143 3468021 3468780 3L - 3468599 3468660 3'utr CG14971 FlyBase G34137.1 AGCTAGTTAGTTTGACACTCTTCATTCCTTCCGTCACCGATTCCCTCAACTTCCTCGATGCA 213 3468636 0.734454623 6 211 1698 0.992125984 2.401400541 0.106299213 0.154929577 0.291338583 213 2 0 252 3L:3468599-3468660 6 CG14971 FBtr0073143 3468021 3468780 TCCGTC 6mer3-8 dme-miR-184-3p 3L - 3468554 3468661 3'utr CG14971 FlyBase G25818.1 AAGCTAGTTAGTTTGACACTCTTCATTCCTTCCGTCACCGATTCCCTCAACTTCCTCGATGCATTCCCGCCTTGTGCATTTAGGGGCTAGGCTAGATATATGAGACGT 125 3468636 0.984114619 12 120 977 0.947368421 1.653212514 0.084210526 0.384 0.594736842 125 7 3 180 3L:3468554-3468661 6 164 1870 FBgn0035449 481.2366667 24.29333333 37.37 0.340788663 6.750823271 4.388546963 5 5 5 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA 3L 3505238 3505245 + 3L_3505238_3505245_+ 0.558238192 0.576978174 0.567608183 0.013251181 CG42324 FBtr0334633|FBtr0330142 3505096|3505096 3505316|3505316 3L + 3505190 3505251 3'utr CG42324 FlyBase G27820.1 AATCACGAAGACTGCGTTAAGTTAACAATATGATTTCGTTCCCTTGACTGCATTTAACAATC 21 3505233 0.782574145 11 21 168 1 1.397940009 0.08 0.142857143 0.28 21 0 0 25 3L:3505190-3505251 8 CG42324 FBtr0330142|FBtr0334633 3505096|3505096 3505316|3505316 TGCATTTA 8mer-A1 dme-miR-277-3p 3L + 3505171 3505246 3'utr CG42324 FlyBase G21076.1 TTTTCTAGGCAACGGATTCAATCACGAAGACTGCGTTAAGTTAACAATATGATTTCGTTCCCTTGACTGCATTTAA 19 3505232 0.990981629 10 16 159 0.869565217 1.301029996 0.086956522 0.210526316 0.347826087 19 3 0 20 3L:3505171-3505246 8 12.5 1871 FBgn0259224 58.33333333 1.43 2.216666667 0.214285714 8.741258741 5.639097744 5 6 5.5 0.2 dme-miR-7-5p 7mer-m8 GTCTTCC 3L 3508949 3508955 + 3L_3508949_3508955_+ 0.69622842 0.692250289 0.694239355 0.002812941 CG42324 FBtr0334634|FBtr0334632|FBtr0334635|FBtr0334636 3508532|3508532|3508532|3508532 3510895|3510895|3510895|3510895 3L + 3508924 3508960 3'utr CG42324 FlyBase G27838.1 TGTTCATTATATGTTACCCCTTAAAGTCTTCCTTTTC 13 3508956 0.922617944 5 10 122 0.769230769 0.698970004 0 0 0 13 2 1 10 3L:3508924-3508960 7 CG42324 FBtr0334636|FBtr0334635|FBtr0334632|FBtr0334634 3508532|3508532|3508532|3508532 3510895|3510895|3510895|3510895 GTCTTCC 7mer-m8 dme-miR-7-5p 3L + 3508913 3508961 3'utr CG42324 FlyBase G21094.1 TTTAGTATGTATGTTCATTATATGTTACCCCTTAAAGTCTTCCTTTTCA 10 3508957 0.992842402 7 9 106 0.909090909 0.698970004 0 0.1 0.181818182 10 0 1 10 3L:3508913-3508961 7 10.5 1872 FBgn0259224 58.33333333 1.43 2.216666667 0.18 7.342657343 4.736842105 -7 -8 -7.5 0.2 dme-miR-980-3p 6mer2-7 GCAGCT 3L 3509070 3509075 + 3L_3509070_3509075_+ 0.603028388 0.626899337 0.614963862 0.016879275 CG42324 FBtr0334634|FBtr0334632|FBtr0334635|FBtr0334636 3508532|3508532|3508532|3508532 3510895|3510895|3510895|3510895 3L + 3509048 3509086 3'utr CG42324 FlyBase G27839.2 AATCTGAAGCCCAACAGAAATTGCAGCTGAAATCAAAAG 18 3509068 0.809674087 2 17 60 0.95 1.278753601 0.1 0.111111111 0.2 18 1 0 19 3L:3509048-3509086 6 CG42324 FBtr0334636|FBtr0334635|FBtr0334632|FBtr0334634 3508532|3508532|3508532|3508532 3510895|3510895|3510895|3510895 GCAGCT 6mer2-7 dme-miR-980-3p 3L + 3509048 3509084 3'utr CG42324 FlyBase G21096.1 AATCTGAAGCCCAACAGAAATTGCAGCTGAAATCAAA 12 3509068 0.755389678 2 12 36 1 1.230448921 0.058823529 0.333333333 0.529411765 12 0 0 17 3L:3509048-3509084 6 14.5 1873 FBgn0259224 58.33333333 1.43 2.216666667 0.248571429 10.13986014 6.541353383 2 2 2 0.2 dme-miR-92b-3p 8mer-A1 GTGCAATA 3L 3509329 3509336 + 3L_3509329_3509336_+ 0.576764995 0.628035405 0.6024002 0.036253648 CG42324 FBtr0334634|FBtr0334632|FBtr0334635|FBtr0334636 3508532|3508532|3508532|3508532 3510895|3510895|3510895|3510895 3L + 3509187 3509350 3'utr CG42324 FlyBase G27840.1 AACCACGAGAATTCGAAAACTTTGCCCAAGCAAACTTAGGTTACACTGGAAATATATGAATTATATTTATAGGAATATATAGATAATTATGCTATATACGATTTATATTTGATAAGCGCGTTATATTTTCTACATTCCGATTGTGCAATATTTTTTGGTAGTGT 27 3509327 0.973582754 13 26 233 0.96875 1.491361694 0.125 0.074074074 0.21875 27 1 0 31 3L:3509187-3509350 8 CG42324 FBtr0334636|FBtr0334635|FBtr0334632|FBtr0334634 3508532|3508532|3508532|3508532 3510895|3510895|3510895|3510895 GTGCAATA 8mer-A1 dme-miR-92b-3p 3L + 3509315 3509348 3'utr CG42324 FlyBase G21098.1 TCTACATTCCGATTGTGCAATATTTTTTGGTAGT 9 3509327 0.842265092 2 7 92 0.705882353 1.079181246 0.117647059 0.555555556 0.764705882 9 5 0 12 3L:3509315-3509348 8 8.5 1874 FBgn0259224 58.33333333 1.43 2.216666667 0.145714286 5.944055944 3.834586466 2 2 2 0.2 dme-miR-8-3p 6mer2-7 AGTATT 3L 355982 355987 + 3L_355982_355987_+ 0.94518143 0.965904809 0.955543119 0.014653657 Ptpmeg FBtr0306560|FBtr0306562|FBtr0306563 355526|355526|355526 356050|356050|356050 3L + 355940 356000 3'utr Ptpmeg FlyBase G26774.1 GCGAACCTTATACACTGATAGACATGAGAAGATAAAACTGTTAGTATTTTAGCACCAAATC 64 355981 0.664473635 11 49 408 0.766233766 1.293730757 0.155844156 0.15625 0.298701299 64 16 2 59 3L:355940-356000 6 Ptpmeg FBtr0306562|FBtr0306563|FBtr0306560 355526|355526|355526 356050|356050|356050 AGTATT 6mer2-7 dme-miR-8-3p 3L + 355924 355998 3'utr Ptpmeg FlyBase G20239.1 AAGAGCAACCGAGAATGCGAACCTTATACACTGATAGACATGAGAAGATAAAACTGTTAGTATTTTAGCACCAAA 40 355981 0.988009629 12 29 256 0.7 1.146128036 0.1 0.325 0.55 40 16 2 42 3L:355924-355998 6 45.5 1875 FBgn0261985 1055.98 31.95666667 49.17666667 0.043087937 1.423803067 0.925235545 1 1 1 0.2 dme-miR-33-5p 7mer-A1 AATGCAA 3L 3607701 3607707 + 3L_3607701_3607707_+ 0.78266947 0.78132717 0.78199832 0.000949149 Eip63E FBtr0302598|FBtr0073134|FBtr0110925|FBtr0110923|FBtr0110921|FBtr0110924|FBtr0330068|FBtr0073133|FBtr0073131|FBtr0110920|FBtr0073132|FBtr0073135|FBtr0110922|FBtr0301948 3607565|3607565|3607565|3607565|3607565|3607565|3607613|3607565|3607565|3607565|3607565|3607565|3607565|3607565 3610521|3608549|3608549|3608549|3608549|3610521|3608549|3608549|3608549|3608549|3608549|3608549|3608549|3608549 3L + 3607684 3607723 3'utr Eip63E FlyBase G27860.1 AATCGACAGCCATATATAATGCAAGAGGAACTTCTCGCCC 30 3607699 0.6075269 4 22 123 0.787878788 0.937852093 0.212121212 0.1 0.181818182 30 5 2 26 3L:3607684-3607723 7 Eip63E FBtr0110922|FBtr0073133|FBtr0301948|FBtr0110921|FBtr0073132|FBtr0110925|FBtr0073135|FBtr0302598|FBtr0110924|FBtr0330068|FBtr0073131|FBtr0110920|FBtr0073134|FBtr0110923 3607565|3607565|3607565|3607565|3607565|3607565|3607565|3607565|3607565|3607613|3607565|3607565|3607565|3607565 3608549|3608549|3608549|3608549|3608549|3608549|3608549|3610521|3610521|3608549|3608549|3608549|3608549|3608549 AATGCAA 7mer-A1 dme-miR-33-5p 3L + 3607667 3607836 3'utr Eip63E FlyBase G21110.1 CTATCGCATCATCCAGCAATCGACAGCCATATATAATGCAAGAGGAACTTCTCGCCCGCGCAGAAGTTTTGTACTATAATTCTATGATACTTTTTAGTTATTAGTTCGATTTCGCAGTGAGTTAGCTGAGGGAGTTTAGCAGAAGACACGGCACCAACGGCAGCATTTTA 30 3607699 0.956481142 16 29 145 0.930232558 1.602059991 0.302325581 0.4 0.581395349 30 3 0 40 3L:3607667-3607836 7 20.5 1876 FBgn0005640 1126.993333 37.81333333 57.97333333 0.018189992 0.542136812 0.353610856 2 2 2 0.2 dme-miR-79-3p 7mer-m8 TAGCTTT 3L 3615165 3615171 + 3L_3615165_3615171_+ 0.619133495 0.615978629 0.617556062 0.002230851 CG10359 FBtr0290290|FBtr0273204 3615072|3615072 3615244|3615244 3L + 3615135 3615195 3'utr CG10359 FlyBase G27866.1 AATCGATTGCTTGCATTTTAACCCTAGCTTTAGCTTTGAATCTCTCTGTGCGTGTGTGTGT 24 3615170 0.824682188 10 20 234 0.833333333 1.397940009 0.5 0.208333333 0.366666667 24 5 0 25 3L:3615135-3615195 7 CG10359 FBtr0273204|FBtr0290290 3615072|3615072 3615244|3615244 TAGCTTT 7mer-m8 dme-miR-79-3p 3L + 3615127 3615196 3'utr CG10359 FlyBase G21116.1 TAACCCACAATCGATTGCTTGCATTTTAACCCTAGCTTTAGCTTTGAATCTCTCTGTGCGTGTGTGTGTA 19 3615170 0.994499024 7 14 201 0.724137931 1.322219295 0.206896552 0.421052632 0.620689655 19 8 0 21 3L:3615127-3615196 7 14 1877 FBgn0035452 20.66666667 1.506666667 2.33 0.677419355 9.292035398 6.008583691 -5 -5 -5 0.2 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3L 3803886 3803891 - 3L_3803886_3803891_- 0.970288454 0.634010864 0.802149659 0.237784171 ntc FBtr0073185 3803830 3803958 3L - 3803858 3803899 5'utr ntc FlyBase G34155.1 TTATTAAGTGGTGCATAAAGATTCTCGGGAATCATTGTATGT 5 3803878 0.908524541 2 5 45 1 0.698970004 0 0 0 5 0 0 5 3L:3803858-3803899 6 ntc FBtr0073185 3803830 3803958 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3L - 3803866 3803899 5'utr ntc FlyBase G25834.1 TTATTAAGTGGTGCATAAAGATTCTCGGGAATCA 5 3803891 0.785204915 2 5 35 1 0.954242509 0 0.4 0.666666667 5 0 0 9 3L:3803866-3803899 6 5 1878 FBgn0035461 62.16 4.68 6.936666667 0.08043758 1.068376068 0.720807304 -13 0 -6.5 0.2 dme-miR-304-5p 8mer-A1 TGAGATTA 3L 3813693 3813700 + 3L_3813693_3813700_+ 0.625102503 0.625209174 0.625155839 7.54E-05 CG12006 FBtr0073150|FBtr0073149 3813623|3813623 3813958|3813958 3L + 3813605 3813717 stop_codon CG12006 FlyBase G27872.1 ACGAGAATCTGTTCAATTAGATAATAGAGAAAATAAGAGAACCCACCACCGACGCCCTCCGTTCAAAAGCAAGAAGCAATGACACATTTGAGATTAACTAATAGATACAAACC 53 3813692 0.999859162 8 51 308 0.970149254 1.812913357 0.059701493 0.226415094 0.388059701 53 2 0 65 3L:3813605-3813717 8 CG12006 FBtr0073149|FBtr0073150 3813623|3813623 3813958|3813958 TGAGATTA 8mer-A1 dme-miR-304-5p 3L + 3813564 3813704 stop_codon CG12006 FlyBase G21121.1 CGATCATCCGCCGCTGGAGGATCTCGTCCTGGCCAACGAGAACGAGAATCTGTTCAATTAGATAATAGAGAAAATAAGAGAACCCACCACCGACGCCCTCCGTTCAAAAGCAAGAAGCAATGACACATTTGAGATTAACTA 25 3813692 0.974048468 8 22 122 0.875 1.06694679 0.1 0.48 0.675 25 3 2 35 3L:3813564-3813704 8 27 1879 FBgn0035464 622.06 34.45666667 52.80333333 0.043404173 0.783592919 0.511331355 1 1 1 0.2 dme-bantam-3p 6mer2-7 GATCTC 3L 3813928 3813933 + 3L_3813928_3813933_+ 0.994438411 0.987461019 0.990949715 0.004933767 CG12006 FBtr0073150|FBtr0073149 3813623|3813623 3813958|3813958 3L + 3813906 3813951 3'utr CG12006 FlyBase G27874.1 ACTTGATCTGTCCTTTCTTTAAGATCTCGAAATAAAGGTTCAGTGG 15 3813924 0.981148013 4 14 134 0.894736842 0.753327667 0.052631579 0.133333333 0.315789474 15 0 2 17 3L:3813906-3813951 6 CG12006 FBtr0073149|FBtr0073150 3813623|3813623 3813958|3813958 GATCTC 6mer2-7 dme-bantam-3p 3L + 3813913 3813938 3'utr CG12006 FlyBase G21124.1 CTGTCCTTTCTTTAAGATCTCGAAAT 12 3813924 0.699683245 4 12 96 1 1.255272505 0 0.333333333 0.555555556 12 0 0 18 3L:3813913-3813938 6 13.5 1880 FBgn0035464 622.06 34.45666667 52.80333333 0.021702087 0.391796459 0.255665678 4 4 4 0.2 dme-miR-1006-3p 6mer3-8 CGAATT 3L 3818340 3818345 + 3L_3818340_3818345_+ 0.434486814 0.478863293 0.456675054 0.031378924 Scsalpha FBtr0073151 3817998 3818383 3L + 3818324 3818374 3'utr Scsalpha FlyBase G27884.1 GCTCGAATTATCAATGCGAATTGTATCTGAATGTGTAATAAATATGCATAA 21 3818345 0.786049582 3 20 156 0.962962963 1.414973348 0.296296296 0.285714286 0.444444444 21 1 0 26 3L:3818324-3818374 6 Scsalpha FBtr0073151 3817998 3818383 CGAATT 6mer3-8 dme-miR-1006-3p 3L + 3818328 3818358 3'utr Scsalpha FlyBase G21132.1 GAATTATCAATGCGAATTGTATCTGAATGTG 16 3818345 0.688206199 4 13 108 0.916666667 0.865301426 0.666666667 0.4375 0.625 16 0 2 22 3L:3818328-3818358 6 17 1881 FBgn0004888 1159.643333 96.01 147.01 0.01465968 0.177064889 0.115638392 -5 -5 -5 0.2 dme-miR-283-5p 6mer3-8 TGATAT 3L 3936739 3936744 - 3L_3936739_3936744_- 0.615056008 0.794697543 0.704876775 0.127025723 CG10866 FBtr0073173|FBtr0345342 3936595|3936058 3937012|3937012 3L - 3936720 3936776 3'utr CG10866 FlyBase G34186.2 TCTAACTAGAATACAGATAATATCCGGATATGTGATATGTAGTCCTTAGACAAACTA 89 3936748 0.988611041 10 80 766 0.91588785 1.991226076 0.065420561 0.157303371 0.299065421 89 9 0 98 3L:3936720-3936776 6 CG10866 FBtr0345342|FBtr0073173 3936058|3936595 3937012|3937012 TGATAT 6mer3-8 dme-miR-283-5p 3L - 3936655 3936770 3'utr CG10866 FlyBase G25860.1 TAGAATACAGATAATATCCGGATATGTGATATGTAGTCCTTAGACAAACTAGAGTAACGAGCATAGCGCACAACGATATCTAATCGATTTTCAACTTCAACTCTGACTCTTGTAAC 74 3936739 0.985422993 15 68 564 0.896551724 1.716003344 0.103448276 0.391891892 0.612068966 74 11 1 104 3L:3936655-3936770 6 75 1882 FBgn0035475 72.03666667 6.396666667 9.86 1.041136458 11.7248567 7.606490872 4 -5 -0.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 3936987 3936993 - 3L_3936987_3936993_- 0.581208165 0.590519693 0.585863929 0.006584225 CG10866 FBtr0073173|FBtr0073173|FBtr0073173|FBtr0345342|FBtr0345342|FBtr0345342 3936595|3936595|3936595|3936058|3936058|3936058 3937012|3937012|3937012|3937012|3937012|3937012 3L - 3936808 3937030 stop_codon CG10866 FlyBase G34187.1 CGCTACATGCAGGTCTAGGCTATATGTAGGAACACTTTGTGATAATATTGCAAAACATCATCAAATGGTAAATGCAAATTGCTTTTCAAGCTTCAAGCGCTTTAAGATTAGAGATCGCCTAGAAACCCAAATACTTCCTCGCAACAGGACACAATTTTACACGGATCTACTACTAGAAGTACCTTTTTGAGGGAACTATGCTTCCCGTCCAATTGATTTTTCT 422 3936994 0.809104586 37 401 3114 0.950664137 1.62065648 0.168880455 0.201421801 0.360531309 422 15 11 501 3L:3936808-3937030 7 CG10866 FBtr0345342|FBtr0345342|FBtr0345342|FBtr0073173|FBtr0073173|FBtr0073173 3936058|3936058|3936058|3936595|3936595|3936595 3937012|3937012|3937012|3937012|3937012|3937012 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 3936878 3937031 stop_codon CG10866 FlyBase G25861.2 TCGCTACATGCAGGTCTAGGCTATATGTAGGAACACTTTGTGATAATATTGCAAAACATCATCAAATGGTAAATGCAAATTGCTTTTCAAGCTTCAAGCGCTTTAAGATTAGAGATCGCCTAGAAACCCAAATACTTCCTCGCAACAGGACACA 216 3936994 0.802454071 20 198 1548 0.922330097 1.278753601 0.174757282 0.347222222 0.54368932 216 10 14 285 3L:3936878-3937031 7 194.5 1883 FBgn0035475 72.03666667 6.396666667 9.86 2.700013882 30.4064617 19.72616633 1 1 1 0.2 dme-miR-283-5p 8mer-A1 TGATATTA 3L 4037648 4037655 - 3L_4037648_4037655_- 0.479720831 0.483861514 0.481791172 0.002927917 CG11593 FBtr0114509|FBtr0332982 4037521|4037521 4038458|4038458 3L - 4037624 4037878 3'utr CG11593 FlyBase G34193.2 CGCATATTGTATATTCCAAGCGTTCCAAACACGACACTTTCGCTGACACATGATGGACCCCATGCCAGTCGACAGTAGGTGCCCCATTTATCTCATCCACCATCAGAGTTAGCCGATTAGCCTGTAAGTGAAATAGCGACCATTCTTTGTGGAATCTACACACGGACACACGTAGAATCTCTCTAGCGGATAATGTGACGTACAATTAGGCAATGTAACCGATTGATATTAAGAGCGACATTTTGTTGGTTTCCT 149 4037656 0.920366462 31 147 846 0.983870968 2.26245109 0.166666667 0.194630872 0.35483871 149 3 0 183 3L:4037624-4037878 8 CG11593 FBtr0332982|FBtr0114509 4037521|4037521 4038458|4038458 TGATATTA 8mer-A1 dme-miR-283-5p 3L - 4037612 4037746 3'utr CG11593 FlyBase G25865.1 ATAGCGACCATTCTTTGTGGAATCTACACACGGACACACGTAGAATCTCTCTAGCGGATAATGTGACGTACAATTAGGCAATGTAACCGATTGATATTAAGAGCGACATTTTGTTGGTTTCCTTTTACCGCTTTA 90 4037656 0.970502511 14 86 495 0.948148148 2.10720997 0.118518519 0.388888889 0.592592593 90 7 0 128 3L:4037612-4037746 8 55 1884 FBgn0035488 490 23.04 35.21 0.112244898 2.387152778 1.562056234 1 1 1 0.2 dme-bantam-3p 7mer-A1 GATCTCA 3L 4038288 4038294 - 3L_4038288_4038294_- 0.799152277 0.807582342 0.80336731 0.00596091 CG11593 FBtr0114509|FBtr0332982 4037521|4037521 4038458|4038458 3L - 4038211 4038392 3'utr CG11593 FlyBase G34196.1 ACTCGCTACTCGAGCCTCTGCATTCCCCATCTTCAATAAGGACTGAGGCTAATCCTCCAAACCGATCGTTTGCGCTCTCTCGCTATGCTTTAATTTAAGATCTCAATCTTTGTGATACTTTATTTTTGCCTTCTCTCAGCCAAGTCGAAATCCCCCCCAGCATTTTTCTGTGTGAAGCGTGA 190 4038301 0.987340644 28 178 1597 0.937219731 1.278753601 0.295964126 0.152631579 0.278026906 190 4 10 209 3L:4038211-4038392 7 CG11593 FBtr0332982|FBtr0114509 4037521|4037521 4038458|4038458 GATCTCA 7mer-A1 dme-bantam-3p 3L - 4038231 4038417 3'utr CG11593 FlyBase G25868.1 TGCAAACTTAACGCATTCATGCCACACTCGCTACTCGAGCCTCTGCATTCCCCATCTTCAATAAGGACTGAGGCTAATCCTCCAAACCGATCGTTTGCGCTCTCTCGCTATGCTTTAATTTAAGATCTCAATCTTTGTGATACTTTATTTTTGCCTTCTCTCAGCCAAGTCGAAATCCCCCCCAGCA 108 4038299 0.984197876 30 103 906 0.961783439 2.178976947 0.324840764 0.342592593 0.547770701 108 6 0 151 3L:4038231-4038417 7 80.5 1885 FBgn0035488 490 23.04 35.21 0.164285714 3.493923611 2.286282306 7 5 6 0.2 dme-miR-33-5p 7mer-A1 AATGCAA 3L 4094424 4094430 - 3L_4094424_4094430_- 0.762776979 0.740194258 0.751485618 0.01596838 CG14995 FBtr0073272|FBtr0073271|FBtr0310630|FBtr0073273|FBtr0302304|FBtr0300877 4094341|4094341|4094341|4094341|4094341|4094341 4095008|4095008|4095008|4095008|4095008|4097425 3L - 4094398 4094473 3'utr CG14995 FlyBase G34204.1 AAAGCAAATAACGCTAAACCTTAATTTTAATATATTTACCTAAAATGCAATGAACACGTCCAGTTTATGTTTGCCG 8 4094423 0.977098458 5 7 56 0.888888889 0.602059991 0 0.125 0.222222222 8 0 1 8 3L:4094398-4094473 7 CG14995 FBtr0073272|FBtr0310630|FBtr0302304|FBtr0073271|FBtr0073273|FBtr0300877 4094341|4094341|4094341|4094341|4094341|4094341 4095008|4095008|4095008|4095008|4095008|4097425 AATGCAA 7mer-A1 dme-miR-33-5p 3L - 4094406 4094445 3'utr CG14995 FlyBase G25875.1 AATATATTTACCTAAAATGCAATGAACACGTCCAGTTTAT 9 4094424 0.95768435 4 8 43 0.923076923 1.079181246 0.384615385 0.222222222 0.461538462 9 1 0 12 3L:4094406-4094445 7 7.5 1886 FBgn0035497 401.3666667 15.55333333 23.84 0.018686156 0.482211745 0.314597315 -7 -6 -6.5 0.2 dme-miR-305-5p 7mer-m1 GTACAAT 3L 4113940 4113946 + 3L_4113940_4113946_+ 0.761463478 0.744655536 0.753059507 0.011885051 Ack FBtr0073211 4113786 4114157 3L + 4113723 4113966 stop_codon Ack FlyBase G27961.1 AGGCGCTGCAGCAGACCAACTGGAGCTTAGAGGTGGCAGCTGAACTACTACTGAATGCCGGCTAAACCCACAAACTACAACCATGTATTACCGCCTCGAATGTAATTGCTTTAGTTTTACGTGCTGAATATTCTTTTAAACTTAGCTAACGATGTATCGAATCTTTATCAAAATACTCCTAGGTGAATGCGCGAATGCAAACACATTGTCAACGACTGTACAATTTGTTCTATTTAATGTAAGC 153 4113946 0.942671385 32 146 880 0.956989247 1.773298748 0.290322581 0.189542484 0.333333333 153 6 2 178 3L:4113723-4113966 7 Ack FBtr0073211 4113786 4114157 GTACAAT 7mer-m1 dme-miR-305-5p 3L + 4113810 4113958 3'utr Ack FlyBase G21181.1 TTACCGCCTCGAATGTAATTGCTTTAGTTTTACGTGCTGAATATTCTTTTAAACTTAGCTAACGATGTATCGAATCTTTATCAAAATACTCCTAGGTGAATGCGCGAATGCAAACACATTGTCAACGACTGTACAATTTGTTCTATTTA 95 4113946 0.842325462 21 89 603 0.957746479 1.832508913 0.352112676 0.4 0.598591549 95 5 1 136 3L:4113810-4113958 7 67 1887 FBgn0028484 434.37 11.81666667 17.96333333 0.15424638 5.669957687 3.729820004 -6 -6 -6 0.2 dme-bantam-3p 6mer3-8 TGATCT 3L 4114338 4114343 - 3L_4114338_4114343_- 0.989132917 0.996797688 0.992965302 0.005419832 Chd64 FBtr0073270|FBtr0310531 4114287|4114287 4114971|4114971 3L - 4114273 4114364 3'utr Chd64 FlyBase G34209.1 TACGTGTTACACACTTTTGAATGATCTATTTTAAATAATGTCCCCTGTTGAAAATAAATAATTATTCTTTTAACACATATTGCTTGTATCTT 44 4114343 0.992255081 11 42 476 0.961538462 1.698970004 0.057692308 0.136363636 0.269230769 44 2 0 50 3L:4114273-4114364 6 Chd64 FBtr0310531|FBtr0073270 4114287|4114287 4114971|4114971 TGATCT 6mer3-8 dme-bantam-3p 3L - 4114292 4114357 3'utr Chd64 FlyBase G25878.1 TACACACTTTTGAATGATCTATTTTAAATAATGTCCCCTGTTGAAAATAAATAATTATTCTTTTAA 25 4114344 0.992395246 8 24 264 0.973684211 1.568201724 0.157894737 0.4 0.605263158 25 1 0 37 3L:4114292-4114357 6 30 1888 FBgn0035499 3483.076667 314.5766667 480.2833333 0.008613075 0.095366259 0.062463129 0 1 0.5 0.2 dme-miR-980-5p 6mer2-7 AAAAAC 3L 4114416 4114421 - 3L_4114416_4114421_- 0.997540436 0.988311123 0.99292578 0.006526101 Chd64 FBtr0073270|FBtr0310531 4114287|4114287 4114971|4114971 3L - 4114409 4114499 3'utr Chd64 FlyBase G34210.1 GTGTTTGATGAATGTGTCTTCTATCTCGTAGAGTAACGATTACAATGTTGTTTCGAACTAACCACCTGAATACCAATCAAAAACGCAGAGC 13 4114441 0.978866028 9 12 79 0.923076923 1.079181246 0.153846154 0 0 13 1 0 12 3L:4114409-4114499 6 Chd64 FBtr0310531|FBtr0073270 4114287|4114287 4114971|4114971 AAAAAC 6mer2-7 dme-miR-980-5p 3L - 4114380 4114486 3'utr Chd64 FlyBase G25879.1 GTGTCTTCTATCTCGTAGAGTAACGATTACAATGTTGTTTCGAACTAACCACCTGAATACCAATCAAAAACGCAGAGCATTTACAATAATGTATTTACAGGCAGAGC 12 4114441 0.970371437 9 12 70 1 1.204119983 0.125 0.25 0.4375 12 0 0 16 3L:4114380-4114486 6 2.5 1889 FBgn0035499 3483.076667 314.5766667 480.2833333 0.000717756 0.007947188 0.005205261 20 20 20 0.2 dme-miR-33-5p 8mer-A1 CAATGCAA 3L 4140749 4140756 + 3L_4140749_4140756_+ 0.632412374 0.63419349 0.633302932 0.001259428 Ras64B FBtr0073212 4140459 4141398 3L + 4140714 4140823 3'utr Ras64B FlyBase G27969.1 AAATAGCTACGAAGAATCTTACAACTGACAACTAACAATGCAAAATGCAAACAGAAACACGAAACATAGGTAGATATATACAACAGATTCACACGAATAACTTATATATA 48 4140746 0.940494905 9 44 177 0.9 1.73239376 0.35 0.208333333 0.366666667 48 6 0 54 3L:4140714-4140823 8 Ras64B FBtr0073212 4140459 4141398 CAATGCAA 8mer-A1 dme-miR-33-5p 3L + 4140694 4140766 3'utr Ras64B FlyBase G21184.1 GAATAAACTTCGCCACTCTCAAATAGCTACGAAGAATCTTACAACTGACAACTAACAATGCAAAATGCAAACA 30 4140746 0.850917177 9 28 111 0.955555556 1.633468456 0.488888889 0.333333333 0.555555556 30 2 0 43 3L:4140694-4140766 8 28.5 1890 FBgn0003206 861.7733333 65.11666667 99.82666667 0.033071341 0.437675966 0.285494858 3 3 3 0.2 dme-miR-318-3p 6mer3-8 CCCAGT 3L 4141209 4141214 + 3L_4141209_4141214_+ 0.995793373 0.758985099 0.877389236 0.167448755 Ras64B FBtr0073212 4140459 4141398 3L + 4141186 4141253 3'utr Ras64B FlyBase G27971.1 TTAACGATACTTTTGTACATGTCCCCAGTCGGATCCGGATCCTATGGTTTATTGTTCGCCAAATGTAT 8 4141199 0.987090434 6 7 59 0.888888889 0.903089987 0.333333333 0.125 0.222222222 8 1 0 8 3L:4141186-4141253 6 Ras64B FBtr0073212 4140459 4141398 CCCAGT 6mer3-8 dme-miR-318-3p 3L + 4141191 4141223 3'utr Ras64B FlyBase G21185.1 GATACTTTTGTACATGTCCCCAGTCGGATCCGG 6 4141205 0.994872032 2 3 27 0.636363636 0.84509804 0.272727273 0.666666667 0.818181818 6 4 0 7 3L:4141191-4141223 6 5.5 1891 FBgn0003206 861.7733333 65.11666667 99.82666667 0.006382189 0.084463783 0.055095499 10 4 7 0.2 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 4173445 4173451 + 3L_4173445_4173451_+ 0.821454667 0.823266937 0.822360802 0.001281419 Ero1L FBtr0073217 4173388 4173789 3L + 4173356 4173623 stop_codon Ero1L FlyBase G27974.1 CGAGATGGAGAATTTCCGGTGCGTGCTGAGGTAACCCATCCAGACTGGACTAACCGAGCGACGAGCCGGATCTCATTCGCCTCACATGAGCAGCTAGTTAATTCATACGCACATCGCTGGGGCTGCGTCTTGGACTTCCTACTGAATGCGGTTTCCCTCCCATAGTTCGTAACATTTTTGAGGCCAGAGGCTAGTAACCCCAGGATAGCTGCTTCCCTGTACATACAAACTATTACCCTAGGCTACTTGTACTTTAGCGCACCGTATC 507 4173442 0.949795386 31 498 3210 0.985148515 2.298853076 0.072607261 0.151873767 0.290429043 507 7 2 597 3L:4173356-4173623 7 Ero1L FBtr0073217 4173388 4173789 GCAGCTA 7mer-A1 dme-miR-980-3p 3L + 4173339 4173629 stop_codon Ero1L FlyBase G21189.1 CTATCCAACAGTATATACGAGATGGAGAATTTCCGGTGCGTGCTGAGGTAACCCATCCAGACTGGACTAACCGAGCGACGAGCCGGATCTCATTCGCCTCACATGAGCAGCTAGTTAATTCATACGCACATCGCTGGGGCTGCGTCTTGGACTTCCTACTGAATGCGGTTTCCCTCCCATAGTTCGTAACATTTTTGAGGCCAGAGGCTAGTAACCCCAGGATAGCTGCTTCCCTGTACATACAAACTATTACCCTAGGCTACTTGTACTTTAGCGCACCGTATCACCCTA 405 4173442 0.973535837 34 392 2374 0.975409836 2.172456974 0.091803279 0.377777778 0.586885246 405 12 3 595 3L:4173339-4173629 7 163 1892 FBgn0261274 553.5433333 32.04333333 49.15666667 0.294466558 5.086861542 3.315928663 3 3 3 0.2 dme-miR-8-3p 7mer-A1 AGTATTA 3L 4223420 4223426 + 3L_4223420_4223426_+ 0.789713608 0.786240851 0.787977229 0.00245557 CG43367 FBtr0307311|FBtr0307309|FBtr0307312|FBtr0307310 4222591|4222591|4222591|4222591 4224003|4224003|4224003|4224003 3L + 4223397 4223473 3'utr CG43367 FlyBase G27991.1 ATTAACAGAGCATTTCCAATTGAAGTATTATCACCACAGCACGATCACAGTCCGTCCACACAGATCCGAGATCCGCA 45 4223416 0.921664097 5 42 291 0.93877551 1.361727836 0.163265306 0.088888889 0.163265306 45 2 1 46 3L:4223397-4223473 7 CG43367 FBtr0307310|FBtr0307312|FBtr0307309|FBtr0307311 4222591|4222591|4222591|4222591 4224003|4224003|4224003|4224003 AGTATTA 7mer-A1 dme-miR-8-3p 3L + 4223399 4223467 3'utr CG43367 FlyBase G21201.1 TAACAGAGCATTTCCAATTGAAGTATTATCACCACAGCACGATCACAGTCCGTCCACACAGATCCGAGA 16 4223416 0.831134552 4 12 91 0.782608696 1.255272505 0.217391304 0.25 0.47826087 16 5 0 18 3L:4223399-4223467 7 22.5 1893 FBgn0263110 1107.403333 13.19666667 20.14666667 0.020317801 1.704976004 1.11681006 4 4 4 0.2 dme-miR-14-3p 7mer-A1 AGACTGA 3L 4246452 4246458 - 3L_4246452_4246458_- 0.823349559 0.82334956 0.82334956 0 ago FBtr0073247|FBtr0073246|FBtr0073245 4246341|4246341|4246341 4247475|4247475|4247475 3L - 4246433 4246478 3'utr ago FlyBase G34293.1 CGAACATATATTTTAATTATAGACTGATTTATTAGTAATTGAAATT 138 4246461 0.629084531 14 130 1594 0.946428571 1.72427587 0.029761905 0.18115942 0.327380952 138 7 2 159 3L:4246433-4246478 7 ago FBtr0073246|FBtr0073245|FBtr0073247 4246341|4246341|4246341 4247475|4247475|4247475 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 4246425 4246490 3'utr ago FlyBase G25945.1 GAAATCATTAAGCGAACATATATTTTAATTATAGACTGATTTATTAGTAATTGAAATTAATCTACA 117 4246462 0.992941524 15 109 1278 0.942307692 1.866287339 0.038461538 0.256410256 0.442307692 117 8 1 147 3L:4246425-4246490 7 125 1894 FBgn0041171 1117.28 25.37333333 39.01 0.111878849 4.92643195 3.204306588 3 4 3.5 0.2 dme-miR-1008-3p 7mer-A1 GCTGTGA 3L 4247144 4247150 - 3L_4247144_4247150_- 0.555951926 0.496334244 0.526143085 0.04215608 ago FBtr0073247|FBtr0073246|FBtr0073245 4246341|4246341|4246341 4247475|4247475|4247475 3L - 4247115 4247181 3'utr ago FlyBase G34296.1 AGGGTAGTCGGGTGGTCGGGGTGTGGCTGTGGCTGTGAGTGTATATTGTTAATAATACCCTTTTAAA 40 4247152 0.984785573 7 39 315 0.975609756 1.301029996 0.414634146 0.025 0.048780488 40 0 1 40 3L:4247115-4247181 7 ago FBtr0073246|FBtr0073245|FBtr0073247 4246341|4246341|4246341 4247475|4247475|4247475 GCTGTGA 7mer-A1 dme-miR-1008-3p 3L - 4247115 4247181 3'utr ago FlyBase G25950.1 AGGGTAGTCGGGTGGTCGGGGTGTGGCTGTGGCTGTGAGTGTATATTGTTAATAATACCCTTTTAAA 42 4247152 0.979895396 7 42 308 1 1.755874856 0.666666667 0.285714286 0.473684211 42 0 0 57 3L:4247115-4247181 7 38.5 1895 FBgn0041171 1117.28 25.37333333 39.01 0.034458685 1.51734104 0.986926429 2 2 2 0.2 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3L 4320958 4320965 + 3L_4320958_4320965_+ 0.567773976 0.540527187 0.554150582 0.019266397 CG32250 FBtr0073287|FBtr0306092 4320948|4320948 4321109|4321109 3L + 4320907 4320981 stop_codon CG32250 FlyBase G28064.1 AAAGATAGCCGGCACCGTTGGCATGCTGCTTAAGCGCAACTGAAAAGAGGCTCTAGTCAACAAGTAGTTTTACTC 52 4320960 0.921412227 9 52 204 1 1.785329835 0.131147541 0.115384615 0.245901639 52 0 0 61 3L:4320907-4320981 8 CG32250 FBtr0306092|FBtr0073287 4320948|4320948 4321109|4321109 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L + 4320909 4320981 stop_codon CG32250 FlyBase G21248.1 AGATAGCCGGCACCGTTGGCATGCTGCTTAAGCGCAACTGAAAAGAGGCTCTAGTCAACAAGTAGTTTTACTC 29 4320960 0.942728198 4 29 123 1 1.602059991 0.05 0.275862069 0.475 29 0 0 40 3L:4320909-4320981 8 35.5 1896 FBgn0052250 102.0233333 9.57 14.53333333 0.347959617 3.709508882 2.44266055 -2 -2 -2 0.2 dme-miR-970-3p 7mer-m8 TCTTATG 3L 4323787 4323793 - 3L_4323787_4323793_- 0.453357398 0.611177917 0.532267657 0.111595946 Cip4 FBtr0306533|FBtr0333570|FBtr0308202|FBtr0113138|FBtr0306095|FBtr0308201|FBtr0306096|FBtr0306534|FBtr0333571|FBtr0306094|FBtr0073339 4323528|4322489|4322670|4323528|4323528|4322670|4323528|4322489|4322489|4323528|4323528 4324056|4324056|4324056|4324056|4324056|4324056|4324056|4324056|4324056|4324056|4324056 3L - 4323767 4323816 3'utr Cip4 FlyBase G34348.1 ACTTTGATTTTAAACGTCATTGATCTTATGGTAGTGCAAGCTATATCATA 40 4323796 0.743846846 5 40 330 1 1.740362689 0.072727273 0.275 0.472727273 40 0 0 55 3L:4323767-4323816 7 Cip4 FBtr0306096|FBtr0333571|FBtr0306094|FBtr0306534|FBtr0073339|FBtr0333570|FBtr0306533|FBtr0113138|FBtr0308202|FBtr0306095|FBtr0308201 4323528|4322489|4323528|4322489|4323528|4322489|4323528|4323528|4322670|4323528|4322670 4324056|4324056|4324056|4324056|4324056|4324056|4324056|4324056|4324056|4324056|4324056 TCTTATG 7mer-m8 dme-miR-970-3p 3L - 4323774 4323816 3'utr Cip4 FlyBase G25981.1 ACTTTGATTTTAAACGTCATTGATCTTATGGTAGTGCAAGCTA 24 4323796 0.981525212 5 24 181 1 1.602059991 0.025 0.5 0.7 24 0 0 40 3L:4323774-4323816 7 32 1897 FBgn0035533 1378.006667 51.31333333 79.21666667 0.023221949 0.623619592 0.403955397 3 3 3 0.2 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 3L 434196 434201 - 3L_434196_434201_- 0.746577843 0.999831413 0.873204628 0.179077338 klar FBtr0110818|FBtr0110818 434081|434081 435117|435117 3L - 434189 434282 3'utr klar FlyBase G33021.1 AAAATATCTCTTAGGTTCGTGTTTGGAATTCCTAGACTTAGTTTATGGTTTACTCACTCCTGGCAGATGATCATTGTAATATACTTATAAGGTT 32 434210 0.741794928 12 31 286 0.948717949 1.568201724 0.205128205 0.1875 0.333333333 32 2 0 37 3L:434189-434282 6 klar FBtr0110818|FBtr0110818 434081|434081 435117|435117 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 3L - 434190 434282 3'utr klar FlyBase G24986.1 AAAATATCTCTTAGGTTCGTGTTTGGAATTCCTAGACTTAGTTTATGGTTTACTCACTCCTGGCAGATGATCATTGTAATATACTTATAAGGT 29 434209 0.699419806 11 26 225 0.860465116 1.091080469 0.11627907 0.413793103 0.604651163 29 4 2 37 3L:434190-434282 6 8.5 1898 FBgn0001316 7969.913333 135.5066667 207.9333333 0.001066511 0.062727541 0.040878487 9 8 8.5 0.2 dme-miR-252-5p 8mer-m1 GTACTTAG 3L 434769 434776 - 3L_434769_434776_- 0.5645409 0.557927064 0.561233982 0.004676663 klar FBtr0333851|FBtr0333850|FBtr0110818|FBtr0333852|FBtr0343527|FBtr0112807|FBtr0072565 434297|434297|434081|434297|434297|434297|434297 435117|435117|435117|435117|435117|435117|435117 3L - 434699 434801 3'utr klar FlyBase G33023.1 TGCTGTTCGATTGAACGCTGAATATGTACTTAGGCGAGGAGCAGACGATGCCCAGCCACGTGTAAACTGCCGCATAAAGGAACAAAGGGGCGGATCGTCCCCC 481 434777 0.969575209 10 472 2650 0.981916817 2.433769834 0.253164557 0.130977131 0.244122966 481 9 1 543 3L:434699-434801 8 klar FBtr0333852|FBtr0343527|FBtr0112807|FBtr0072565|FBtr0110818|FBtr0333851|FBtr0333850 434297|434297|434297|434297|434081|434297|434297 435117|435117|435117|435117|435117|435117|435117 GTACTTAG 8mer-m1 dme-miR-252-5p 3L - 434721 434801 3'utr klar FlyBase G24989.1 TGCTGTTCGATTGAACGCTGAATATGTACTTAGGCGAGGAGCAGACGATGCCCAGCCACGTGTAAACTGCCGCATAAAGGA 268 434777 0.77170677 7 264 1435 0.992822967 2.618048097 0.265550239 0.402985075 0.61722488 268 3 0 415 3L:434721-434801 8 366.5 1899 FBgn0001316 7969.913333 135.5066667 207.9333333 0.045985444 2.704663977 1.762584162 1 1 1 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3L 4405020 4405026 + 3L_4405020_4405026_+ 0.521220948 0.521221039 0.521220993 7.07E-08 Syx17 FBtr0073293 4404847 4405168 3L + 4405001 4405037 3'utr Syx17 FlyBase G28070.2 TAGTTCAATATCCCCATTTTGTGATTTTCCACGTGCA 120 4405019 0.602524336 9 113 1180 0.946745562 1.602059991 0.01183432 0.275 0.485207101 120 6 3 160 3L:4405001-4405037 7 Syx17 FBtr0073293 4404847 4405168 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 4404932 4405036 stop_codon Syx17 FlyBase G21253.1 AGCCACCAACGGAGTGATTTGCAGCGTGCGCAGCTATTGTTCCGTTCAGTAGAAATTTGACCACGATTTTAGTTCAATATCCCCATTTTGTGATTTTCCACGTGC 103 4405019 0.989410739 11 101 981 0.981012658 2.190331698 0.056962025 0.398058252 0.607594937 103 3 0 155 3L:4404932-4405036 7 100 1900 FBgn0035540 155.05 12.22333333 18.79666667 0.644953241 8.181074448 5.320092215 1 1 1 0.2 dme-miR-304-5p 6mer2-7 GAGATT 3L 4405293 4405298 - 3L_4405293_4405298_- 0.981864493 0.988411668 0.98513808 0.00462957 CG15019 FBtr0073335|FBtr0113139 4405212|4405125 4405360|4405360 3L - 4405263 4405309 3'utr CG15019 FlyBase G34354.1 GCTTAGTTTAGGAGATTTTGTAGGCTTTTTCTACAAAGATGTTATAG 11 4405281 0.989105411 6 11 103 1 1.113943352 0.384615385 0.181818182 0.307692308 11 0 0 13 3L:4405263-4405309 6 CG15019 FBtr0113139|FBtr0073335 4405125|4405212 4405360|4405360 GAGATT 6mer2-7 dme-miR-304-5p 3L - 4405272 4405321 3'utr CG15019 FlyBase G25984.1 TTATAAGTCCTCGCTTAGTTTAGGAGATTTTGTAGGCTTTTTCTACAAAG 14 4405282 0.662701651 7 12 133 0.863636364 0.67669361 0.090909091 0.428571429 0.636363636 14 0 3 19 3L:4405272-4405321 6 8.5 1901 FBgn0035541 1035.333333 200.3066667 308.5366667 0.008209916 0.042434933 0.0275494 -17 -16 -16.5 0.2 dme-miR-8-3p 6mer2-7 AGTATT 3L 4420031 4420036 + 3L_4420031_4420036_+ 0.503705217 0.999999998 0.751852607 0.350933419 DOR FBtr0073295|FBtr0073294 4419903|4419903 4420648|4420648 3L + 4419881 4420051 stop_codon DOR FlyBase G28084.1 AACCGCAGCAAGTGCTGCTACTAGGCGGCCACCACCCACGCCACCCACAACCACCCAACACCAACACCACCACCATGCCTCCAGCGCTCGAGGAGCCGACGGAGCCGTAGGAGGAGCATTACAATCATGGCAGGCGACGCGATTTTAATTAGTATTTTAACCTTACCCCCA 85 4420026 0.964096258 17 81 503 0.96039604 1.685741739 0.188118812 0.152941176 0.287128713 85 3 1 97 3L:4419881-4420051 6 DOR FBtr0113141|FBtr0308033|FBtr0073296|FBtr0113140|FBtr0308034|FBtr0073295|FBtr0073294 4419903|4419903|4419903|4419903|4419903|4419903|4419903 4420266|4420266|4420266|4420266|4420266|4420648|4420648 AGTATT 6mer2-7 dme-miR-8-3p 3L + 4419980 4420058 3'utr DOR FlyBase G21268.1 CGGAGCCGTAGGAGGAGCATTACAATCATGGCAGGCGACGCGATTTTAATTAGTATTTTAACCTTACCCCCAGATGAAA 52 4420037 0.799027114 12 50 356 0.961038961 1.86923172 0.142857143 0.384615385 0.584415584 52 3 0 74 3L:4419980-4420058 6 33.5 1902 FBgn0035542 115 6.26 9.503333333 0.291304348 5.3514377 3.52507892 5 -6 -0.5 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3L 4539056 4539062 + 3L_4539056_4539062_+ 0.521068364 0.516764383 0.518916374 0.003043388 CG11353 FBtr0073309|FBtr0073308 4538997|4538997 4539270|4539270 3L + 4539025 4539085 3'utr CG11353 FlyBase G28099.1 AAGGTCACCGCACACGCCTCCATCTGACAATTGTGATTGCTTTCATGTACAACTAATCATT 63 4539055 0.825982567 7 58 502 0.934210526 1.073107098 0.026315789 0.174603175 0.315789474 63 0 5 71 3L:4539025-4539085 7 CG11353 FBtr0073308|FBtr0073309 4538997|4538997 4539270|4539270 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 4539026 4539093 3'utr CG11353 FlyBase G21280.1 AGGTCACCGCACACGCCTCCATCTGACAATTGTGATTGCTTTCATGTACAACTAATCATTATTATCGA 57 4539062 0.98701345 8 54 474 0.975308642 1.897627091 0 0.263157895 0.481481481 57 2 0 79 3L:4539026-4539093 7 55 1903 FBgn0035557 9.256666667 0.366666667 0.553333333 5.941663666 150 99.39759036 1 -6 -2.5 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 4552958 4552965 + 3L_4552958_4552965_+ 0.500120187 0.356368226 0.428244206 0.101648014 CG11357 FBtr0304987|FBtr0113142|FBtr0073310|FBtr0113143 4552565|4552565|4552565|4552565 4553457|4553457|4553457|4553457 3L + 4552882 4553094 3'utr CG11357 FlyBase G28116.1 AAACTCTAATAGCGGCAACAATAAACGGAGCGCATAACCTTAAGCACAACTCTTAAATCGTAAGAAAACTACAATAGTACTTAATAAACGATAAAATGATTGAAAACTGCTGAAATCAGTGAATAACCAAACCAAATATTGATTTCGATGTAGATCGCGTAACAGTGGACGGAAATATTTATTAAAAAGTATATATACGTAGGGGCAAACGAA 240 4552956 0.930647674 33 229 1274 0.959854015 1.942834494 0.145985401 0.133333333 0.240875912 240 9 2 263 3L:4552882-4553094 8 CG11357 FBtr0113143|FBtr0073310|FBtr0113142|FBtr0304987 4552565|4552565|4552565|4552565 4553457|4553457|4553457|4553457 GTACTTAA 8mer-A1 dme-miR-252-5p 3L + 4552884 4553073 3'utr CG11357 FlyBase G21296.1 ACTCTAATAGCGGCAACAATAAACGGAGCGCATAACCTTAAGCACAACTCTTAAATCGTAAGAAAACTACAATAGTACTTAATAAACGATAAAATGATTGAAAACTGCTGAAATCAGTGAATAACCAAACCAAATATTGATTTCGATGTAGATCGCGTAACAGTGGACGGAAATATTTATTAAAAAGTAT 164 4552956 0.967506674 22 154 818 0.95703125 1.91204483 0.12109375 0.420731707 0.62890625 164 9 2 245 3L:4552884-4553073 8 52 1904 FBgn0035558 4857.766667 204.6066667 314.1433333 0.010704508 0.254146167 0.165529535 2 2 2 0.2 dme-miR-277-3p 6mer2-7 GCATTT 3L 4593187 4593192 - 3L_4593187_4593192_- 0.969479276 0.826854939 0.898167107 0.10085068 Src64B FBtr0343995|FBtr0304989|FBtr0304990 4592893|4592893|4592445 4594640|4594640|4594640 3L - 4593171 4593217 3'utr Src64B FlyBase G34374.1 TTCTGTAGCATAAAACCAAAGTTTAGCATTTCGTATTGAGATATATG 14 4593196 0.779006446 4 12 79 0.857142857 1.255272505 0 0.285714286 0.523809524 14 3 0 18 3L:4593171-4593217 6 Src64B FBtr0304989|FBtr0304990|FBtr0343995 4592893|4592445|4592893 4594640|4594640|4594640 GCATTT 6mer2-7 dme-miR-277-3p 3L - 4593174 4593229 3'utr Src64B FlyBase G25997.1 ATTGTGTGCACATTCTGTAGCATAAAACCAAAGTTTAGCATTTCGTATTGAGATAT 10 4593196 0.974891474 3 10 67 1 1.113943352 0.307692308 0.3 0.461538462 10 0 0 13 3L:4593174-4593229 6 11 1905 FBgn0262733 767.5933333 20.04333333 30.95666667 0.014330505 0.54881091 0.355335415 4 4 4 0.2 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 3L 4629397 4629402 + 3L_4629397_4629402_+ 0.627243258 0.893380557 0.760311907 0.18818749 Rpd3 FBtr0073317|FBtr0073317 4629114|4629114 4629467|4629467 3L + 4629368 4629407 3'utr Rpd3 FlyBase G28132.1 AGTGTATAGCTAAGCAAAAAGTGAATGCATACTTACAAGC 9 4629396 0.929642568 3 9 35 1 1.079181246 0 0.333333333 0.5 9 0 0 12 3L:4629368-4629407 6 Rpd3 FBtr0073317|FBtr0073317 4629114|4629114 4629467|4629467 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 3L + 4629343 4629427 3'utr Rpd3 FlyBase G21307.1 AAACACAATTTATTTTAAGATCGAAAGTGTATAGCTAAGCAAAAAGTGAATGCATACTTACAAGCGATCCAATGTGGCGAATAAC 12 4629399 0.957794195 7 10 50 1 1.079181246 0 0.2 0.333333333 10 0 0 12 3L:4629343-4629427 6 6.5 1906 FBgn0015805 1165.29 66.60666667 101.9933333 0.005578011 0.097587829 0.063729656 1 -2 -0.5 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 5144303 5144308 - 3L_5144303_5144308_- 0.571838316 0.904935611 0.738386963 0.23553536 CG10671 FBtr0077177|FBtr0077178 5144080|5144080 5144395|5144395 3L - 5144228 5144323 3'utr CG10671 FlyBase G34482.1 CGGATTGGAATTTATACCAAATTTTTGTATATTCAGCAACGATGATATGAAACGATGATGATATTACTAAGCAAGCAGCCGAGGCTGGCACTGGAT 10 5144301 0.98924799 7 8 59 0.866666667 1.113943352 0.2 0.3 0.533333333 10 2 0 13 3L:5144228-5144323 6 CG10671 FBtr0077178|FBtr0077177 5144080|5144080 5144395|5144395 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 5144291 5144345 3'utr CG10671 FlyBase G26060.1 GAAGGAATTGATAGTTAGGTGACGGATTGGAATTTATACCAAATTTTTGTATATT 6 5144301 0.992998419 3 5 54 0.6 0.77815125 0.4 0.333333333 0.6 6 4 0 6 3L:5144291-5144345 6 4 1907 FBgn0035586 278.5933333 18.25333333 27.90333333 0.014357845 0.219138057 0.143352049 -7 -7 -7 0.2 dme-miR-14-3p 7mer-A1 AGACTGA 3L 5158850 5158856 - 3L_5158850_5158856_- 0.823133208 0.823041919 0.823087563 6.46E-05 shep FBtr0308859|FBtr0077174|FBtr0333288|FBtr0333289 5157906|5155819|5155819|5158793 5162466|5162466|5162466|5162466 3L - 5158828 5158871 5'utr shep FlyBase G34491.1 ACGATTATTTGCTTTAGACTGACTACGAACTGAAACTGTAACAA 9 5158858 0.976034573 6 9 65 1 1.041392685 0.181818182 0.111111111 0.272727273 9 0 0 11 3L:5158828-5158871 7 shep FBtr0333288|FBtr0333289|FBtr0308859|FBtr0077174 5155819|5158793|5157906|5155819 5162466|5162466|5162466|5162466 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 5158807 5158869 5'utr shep FlyBase G26066.1 GATTATTTGCTTTAGACTGACTACGAACTGAAACTGTAACAATAACAACAAATGCAGGATTGT 7 5158858 0.982139748 4 7 51 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 3L:5158807-5158869 7 7 1908 FBgn0052423 9763.176667 275.8933333 425.4466667 0.00071698 0.025372124 0.016453296 2 2 2 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3L 5159263 5159269 - 3L_5159263_5159269_- 0.520576227 0.521129459 0.520852843 0.000391242 shep FBtr0308859|FBtr0077174|FBtr0333288|FBtr0333289 5157906|5155819|5155819|5158793 5162466|5162466|5162466|5162466 3L - 5159254 5159287 5'utr shep FlyBase G34492.1 AAGCCTAAGCATTGTATTTGTGATTTTTTCGAAT 23 5159270 0.666961311 4 21 237 0.966666667 1.462397998 0.033333333 0.217391304 0.4 23 1 0 29 3L:5159254-5159287 7 shep FBtr0333288|FBtr0333289|FBtr0308859|FBtr0077174 5155819|5158793|5157906|5155819 5162466|5162466|5162466|5162466 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 5159251 5159283 5'utr shep FlyBase G26067.1 CTAAGCATTGTATTTGTGATTTTTTCGAATGTT 6 5159270 0.71937558 4 6 72 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3L:5159251-5159283 7 13.5 1909 FBgn0052423 9763.176667 275.8933333 425.4466667 0.001382747 0.048931954 0.031731357 1 1 1 0.2 dme-miR-7-5p 6mer3-8 GTCTTC 3L 5343811 5343816 - 3L_5343811_5343816_- 0.725920797 0.695191779 0.710556288 0.021728684 lama FBtr0077160|FBtr0077159|FBtr0333595|FBtr0077161 5343617|5343617|5343617|5343617 5343995|5343995|5343995|5343995 3L - 5343737 5343862 3'utr lama FlyBase G34511.1 TCGTATAATTTGTGTGTTCCTAGTTGGTACATATCTTACGTCCATAGTCTTCTAGTGTCTACTGTACTTATGTATGTATGCGTGTCCAATCGATTATTGTCTTCCAGCTGTACAGCTTTTTATTTT 166 5343827 0.778232526 21 154 1685 0.929648241 1.966141733 0.155778894 0.180722892 0.316582915 166 13 1 185 3L:5343737-5343862 6 lama FBtr0077160|FBtr0077159|FBtr0333595|FBtr0077161 5343617|5343617|5343617|5343617 5343995|5343995|5343995|5343995 GTCTTC 6mer3-8 dme-miR-7-5p 3L - 5343729 5343879 3'utr lama FlyBase G26083.1 TAGTGTCCTGTCTTGTCTCGTATAATTTGTGTGTTCCTAGTTGGTACATATCTTACGTCCATAGTCTTCTAGTGTCTACTGTACTTATGTATGTATGCGTGTCCAATCGATTATTGTCTTCCAGCTGTACAGCTTTTTATTTTCCGTAGGT 116 5343827 0.958983483 29 111 1139 0.971264368 2.227886705 0.172413793 0.387931034 0.591954023 116 5 0 169 3L:5343729-5343879 6 69.5 1910 FBgn0016031 538.5966667 18.35333333 28.06333333 0.129039046 3.78677806 2.476541157 11 11 11 0.2 dme-miR-12-5p 7mer-A1 ATACTCA 3L 5356869 5356875 - 3L_5356869_5356875_- 0.817503992 0.77255443 0.795029211 0.031784167 Klp64D FBtr0077157 5356862 5357220 3L - 5356862 5356905 3'utr Klp64D FlyBase G34519.1 GTGTGCTCTTGGCTTTTAAATAAAAATATGATACTCACACGTAA 30 5356877 0.80619775 6 29 200 0.96969697 1.505149978 0.242424242 0.1 0.181818182 30 1 0 32 3L:5356862-5356905 7 Klp64D FBtr0077157 5356862 5357220 ATACTCA 7mer-A1 dme-miR-12-5p 3L - 5356863 5356929 3'utr Klp64D FlyBase G26088.1 ATTAGGCACAAATATATAACTATTGTGTGCTCTTGGCTTTTAAATAAAAATATGATACTCACACGTA 21 5356877 0.944069004 6 21 122 1 1.505149978 0.0625 0.428571429 0.625 21 0 0 32 3L:5356863-5356929 7 16.5 1911 FBgn0004380 595.0833333 28.55 43.68333333 0.027727209 0.57793345 0.377718428 2 2 2 0.2 dme-miR-184-3p 6mer2-7 CCGTCC 3L 5559567 5559572 - 3L_5559567_5559572_- 0.989224927 0.999532397 0.994378662 0.007288503 sinu FBtr0077136 5559468 5560751 3L - 5559503 5559625 3'utr sinu FlyBase G34543.1 ATTTTCTAAACCGAGAATTTAGCAATGTATTAAAGCAATACATACGTCTTTTACCGTCCCATATACAATAATATGTGTAACATTTTTATGTACAAACGACTTTTAGCTAAAGCGAAGAATAAT 414 5559574 0.749079152 20 401 2901 0.968565815 1.847748879 0.074656189 0.18115942 0.333988212 414 10 6 493 3L:5559503-5559625 6 sinu FBtr0077136 5559468 5560751 CCGTCC 6mer2-7 dme-miR-184-3p 3L - 5559545 5559594 3'utr sinu FlyBase G26109.2 AAAGCAATACATACGTCTTTTACCGTCCCATATACAATAATATGTGTAAC 203 5559574 0.64272732 8 190 1495 0.94137931 1.959041392 0.031034483 0.310344828 0.517241379 203 15 2 273 3L:5559545-5559594 6 237 1912 FBgn0010894 232.6666667 13.51333333 20.52333333 1.018624642 17.53823384 11.54783174 2 2 2 0.2 dme-miR-184-3p 7mer-m8 TCCGTCC 3L 5559644 5559650 - 3L_5559644_5559650_- 0.65654717 0.653731119 0.655139145 0.001991283 sinu FBtr0077136 5559468 5560751 3L - 5559630 5559683 3'utr sinu FlyBase G34543.2 TTTTAAAGGTAACAATTAGGTCTGTATTAATCATCCGTCCTTTGCACGTATTTG 441 5559643 0.644803719 12 389 4167 0.874766355 0.945969983 0.143925234 0.183673469 0.327102804 441 15 52 468 3L:5559630-5559683 7 sinu FBtr0077136 5559468 5560751 TCCGTCC 7mer-m8 dme-miR-184-3p 3L - 5559631 5559679 3'utr sinu FlyBase G26110.1 AAAGGTAACAATTAGGTCTGTATTAATCATCCGTCCTTTGCACGTATTT 325 5559643 0.697642387 14 275 3109 0.845338983 0.852784869 0.165254237 0.335384615 0.542372881 325 18 55 399 3L:5559631-5559679 7 364.5 1913 FBgn0010894 232.6666667 13.51333333 20.52333333 1.566618911 26.97335964 17.76027286 -7 -7 -7 0.2 dme-miR-184-3p 7mer-m8 TCCGTCC 3L 5560606 5560612 - 3L_5560606_5560612_- 0.612303115 0.611257675 0.611780395 0.000739209 sinu FBtr0077136 5559468 5560751 3L - 5560583 5560641 3'utr sinu FlyBase G34547.2 CAACCAAGAGGAAAACAAAACAAAAACATTCCGTCCCCTCAAAGAATTCTCACCCTAAA 2305 5560613 0.949504949 5 2278 7692 0.991147309 2.492760389 0.002832861 0.18308026 0.333215297 2305 17 8 2799 3L:5560583-5560641 7 sinu FBtr0077136 5559468 5560751 TCCGTCC 7mer-m8 dme-miR-184-3p 3L - 5560562 5560640 3'utr sinu FlyBase G26115.1 AACCAAGAGGAAAACAAAACAAAAACATTCCGTCCCCTCAAAGAATTCTCACCCTAAACATTACAGTCGAACTTCTCTA 1540 5560613 0.945764769 10 1526 5069 0.988743809 2.438542349 0.000900495 0.319480519 0.528140477 1540 18 7 2196 3L:5560562-5560640 7 1910.5 1914 FBgn0010894 232.6666667 13.51333333 20.52333333 8.211318052 141.3788851 93.0891668 1 1 1 0.2 dme-miR-986-5p 7mer-m8 ATTCGAG 3L 5564931 5564937 + 3L_5564931_5564937_+ 0.658389563 0.650119186 0.654254375 0.005848056 Sras FBtr0077083 5564827 5565103 3L + 5564918 5564953 3'utr Sras FlyBase G28194.1 AATTGCATATCCCATTCGAGCCAATTCCGCGCACAA 26 5564932 0.737980404 2 26 142 1 1.491361694 0 0.192307692 0.322580645 26 0 0 31 3L:5564918-5564953 7 Sras FBtr0077083 5564827 5565103 ATTCGAG 7mer-m8 dme-miR-986-5p 3L + 5564906 5564955 3'utr Sras FlyBase G21345.1 TGTTTATATGTAAATTGCATATCCCATTCGAGCCAATTCCGCGCACAAAA 21 5564932 0.965155172 4 20 116 1 1.462397998 0 0.285714286 0.482758621 21 0 0 29 3L:5564906-5564955 7 23 1915 FBgn0029121 69.33333333 6.623333333 10.01666667 0.331730769 3.472571716 2.296173045 -1 -1 -1 0.2 dme-miR-33-5p 8mer-A1 CAATGCAA 3L 5566343 5566350 + 3L_5566343_5566350_+ 0.623885448 0.631306355 0.627595902 0.005247439 bc10 FBtr0077084 5565863 5566765 3L + 5566223 5566377 3'utr bc10 FlyBase G28198.1 TAAAGCTTAGACGAATTTAGTTTATACGAAGAAAGCGCTACGAAAACGTATTGTACATCACCCCACCCAAAAGCCCTACCCTTCAAATCAAAAGAAAAAACCCCTATCCAACCCACTTGTCAATGCAACTTACGATTAGTCATATATGTTATATA 135 5566342 0.974351947 20 126 770 0.949685535 1.701855693 0.050314465 0.148148148 0.27672956 135 6 2 151 3L:5566223-5566377 8 bc10 FBtr0077084 5565863 5566765 CAATGCAA 8mer-A1 dme-miR-33-5p 3L + 5566318 5566388 3'utr bc10 FlyBase G21351.1 AAAAACCCCTATCCAACCCACTTGTCAATGCAACTTACGATTAGTCATATATGTTATATATAGATAAATAC 42 5566342 0.979956428 8 37 263 0.921875 1.770852012 0.046875 0.404761905 0.609375 42 5 0 59 3L:5566318-5566388 8 62.5 1916 FBgn0040239 273.54 24.22 36.96666667 0.228485779 2.580511974 1.690712353 1 1 1 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA 3L 5590070 5590077 + 3L_5590070_5590077_+ 0.591055294 0.613146693 0.602100993 0.015620979 l(3)psg2 FBtr0077085 5589915 5590390 3L + 5590048 5590128 3'utr l(3)psg2 FlyBase G28229.1 AATTGACCATTTGTAAACAAGTTGCATTTATTCATAGAAGGTCGTTTTCGATTTATTCAGCTTTAGGTTTCTATGTCATTT 31 5590069 0.892120342 5 31 292 1 1.591064607 0.102564103 0.225806452 0.384615385 31 0 0 39 3L:5590048-5590128 8 l(3)psg2 FBtr0077085 5589915 5590390 TGCATTTA 8mer-A1 dme-miR-277-3p 3L + 5590057 5590089 3'utr l(3)psg2 FlyBase G21376.1 TTTGTAAACAAGTTGCATTTATTCATAGAAGGT 14 5590069 0.893072524 2 11 100 0.85 1.230448921 0.1 0.285714286 0.5 14 3 0 17 3L:5590057-5590089 8 17 1917 FBgn0035617 542.34 10 15.43333333 0.03134565 1.7 1.101511879 1 1 1 0.2 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 5601193 5601198 - 3L_5601193_5601198_- 0.999947979 0.922544561 0.96124627 0.054732469 CG10590 FBtr0077127 5601094 5601788 3L - 5601113 5601219 3'utr CG10590 FlyBase G34576.1 AATCTATGCAACTGCAACAAAATGTGACTTGAACTTGTTTGCGCCAATTAAGTTATGTACGATGCAAGAAATGTGCTGATTAGCAATAGTCGATAATCTAATAATAA 51 5601196 0.748760014 15 49 303 0.96969697 1.806179974 0.196969697 0.254901961 0.424242424 51 2 0 64 3L:5601113-5601219 6 CG10590 FBtr0077127 5601094 5601788 ATGTGA 6mer3-8 dme-miR-1003-3p 3L - 5601110 5601220 3'utr CG10590 FlyBase G26140.1 CAATCTATGCAACTGCAACAAAATGTGACTTGAACTTGTTTGCGCCAATTAAGTTATGTACGATGCAAGAAATGTGCTGATTAGCAATAGTCGATAATCTAATAATAAATT 39 5601191 0.979165506 14 36 252 0.948275862 1.740362689 0.206896552 0.384615385 0.586206897 39 3 0 55 3L:5601110-5601220 6 27 1918 FBgn0035622 320.01 14.52333333 22.10333333 0.084372363 1.859077347 1.221535213 -2 -7 -4.5 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA 3L 5601454 5601461 - 3L_5601454_5601461_- 0.622836046 0.621000634 0.62191834 0.001297824 CG10590 FBtr0077127 5601094 5601788 3L - 5601430 5601498 3'utr CG10590 FlyBase G34577.1 ATTTGGGAAAACATTGTGAATTAAAAGCTCTTTCTGTTGCATTTACGTTTTGCTAGTTTTAAGAGTCAA 13 5601462 0.99246232 7 12 133 0.933333333 1.146128036 0.2 0.153846154 0.266666667 13 1 0 14 3L:5601430-5601498 8 CG10590 FBtr0077127 5601094 5601788 TGCATTTA 8mer-A1 dme-miR-277-3p 3L - 5601431 5601499 3'utr CG10590 FlyBase G26141.1 AATTTGGGAAAACATTGTGAATTAAAAGCTCTTTCTGTTGCATTTACGTTTTGCTAGTTTTAAGAGTCA 14 5601485 0.985715514 5 13 113 0.947368421 1.255272505 0.473684211 0.214285714 0.421052632 14 1 0 18 3L:5601431-5601499 8 7.5 1919 FBgn0035622 320.01 14.52333333 22.10333333 0.023436768 0.516410374 0.339315337 1 24 12.5 0.2 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3L 5659773 5659779 - 3L_5659773_5659779_- 0.421686306 0.437146875 0.429416591 0.010932295 Sse FBtr0077125 5659698 5659878 3L - 5659753 5659832 3'utr Sse FlyBase G34593.1 GGAACTGTGTACAATAATTTAATTTAATTGAACTACTTCATTCAAGTGGAAAGTGGTGCTCAAAGTTTGCATTAAACGCT 63 5659779 0.971379222 9 60 344 0.961038961 1.86923172 0.181818182 0.158730159 0.311688312 63 3 0 74 3L:5659753-5659832 7 Sse FBtr0077125 5659698 5659878 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3L - 5659734 5659803 3'utr Sse FlyBase G26150.1 GAACTACTTCATTCAAGTGGAAAGTGGTGCTCAAAGTTTGCATTAAACGCTAAATGTAACACTCAGAATA 33 5659779 0.963026559 4 33 168 1 1.681241237 0.208333333 0.333333333 0.541666667 33 0 0 48 3L:5659734-5659803 7 44.5 1920 FBgn0035627 140.3333333 7.786666667 11.84333333 0.317102138 5.71489726 3.757388123 0 0 0 0.2 dme-miR-14-3p 7mer-A1 AGACTGA 3L 5750322 5750328 - 3L_5750322_5750328_- 0.823347448 0.823215756 0.823281602 9.31E-05 DnaJ-1 FBtr0077124|FBtr0077123 5750027|5750027 5750588|5750588 3L - 5750070 5750551 3'utr DnaJ-1 FlyBase G34598.1 CGCATATAATTGTTATCACTTTAGTTAAGGCCTATATTTAATTTACCGTACGTACTCGTAAGACAACTTAGCCTAACCAATTGTAGCCCTAAGCTAGTGAGTGTGCCAAGCGAAGAGCTGTAGATATTGGCCGAGGATGCAAGCGCTGGATAGGATTAGGAAAGAGAACAACACACACACACACACACACATAAAGCAGCCCGTGTAGCCCGTTTCGTGTTGGAGACTGATCGATTATTAGCTATTTAGCATTACACAAATTCCATAAGTTGTTTTGTTTACCGCCACATGAATCGGTGCCTCAACATCTTATACATAATAATCCCAAAACAAAATATTAAATAAATGAGGTATTATAAATTTAAAGTAACTAACCATTTTTCAAGCAAAGCACATTTTCGGCATTCCAACACGGGGAGGTTACATCAGTTAGTAGAACACTTATAGATTTATACGCCGTAAGGACATAGTACGTTTTAGTA 679 5750336 0.971579659 70 613 3762 0.910539216 1.829596129 0.234068627 0.176730486 0.31495098 679 63 10 743 3L:5750070-5750551 7 DnaJ-1 FBtr0077124|FBtr0077123 5750027|5750027 5750588|5750588 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 5750185 5750496 3'utr DnaJ-1 FlyBase G26155.1 TCGTAAGACAACTTAGCCTAACCAATTGTAGCCCTAAGCTAGTGAGTGTGCCAAGCGAAGAGCTGTAGATATTGGCCGAGGATGCAAGCGCTGGATAGGATTAGGAAAGAGAACAACACACACACACACACACACATAAAGCAGCCCGTGTAGCCCGTTTCGTGTTGGAGACTGATCGATTATTAGCTATTTAGCATTACACAAATTCCATAAGTTGTTTTGTTTACCGCCACATGAATCGGTGCCTCAACATCTTATACATAATAATCCCAAAACAAAATATTAAATAAATGAGGTATTATAAATTTAAAG 410 5750337 0.975410799 48 353 2257 0.861685215 2.256878032 0.255961844 0.395121951 0.60572337 410 85 2 542 3L:5750185-5750496 7 179.5 1921 FBgn0263106 2505.54 158.3466667 242.02 0.071641243 1.13358875 0.741674242 8 9 8.5 0.2 dme-miR-2a-2-5p 7mer-A1 GATGAGA 3L 5761766 5761772 + 3L_5761766_5761772_+ 0.470431146 0.482114822 0.476272984 0.008261623 Ubp64E FBtr0077095|FBtr0306259 5761383|5761383 5761886|5761886 3L + 5761682 5761847 3'utr Ubp64E FlyBase G28261.1 TGGGGTGGCCAAGTGAGCACAGCACTAAGTGACGTTTAACATAACGAAGTTATTCTTGCAACTTTCGTAATACAAGAGTTCAAAGATGAGACTGTAAAATTTAAAATAACAAAAGGCAAGAAATCTAAATTACAAATTGTATAATGTGAATGTGAACATCAAAACT 1197 5761768 0.972437919 19 1180 7016 0.985294118 3.127104798 0.0125 0.11946533 0.225 1197 20 0 1340 3L:5761682-5761847 7 Ubp64E FBtr0077095|FBtr0306259 5761383|5761383 5761886|5761886 GATGAGA 7mer-A1 dme-miR-2a-2-5p 3L + 5761746 5761848 3'utr Ubp64E FlyBase G21405.1 TCGTAATACAAGAGTTCAAAGATGAGACTGTAAAATTTAAAATAACAAAAGGCAAGAAATCTAAATTACAAATTGTATAATGTGAATGTGAACATCAAAACTA 760 5761768 0.947975984 15 751 4368 0.989954338 2.733999287 0.00456621 0.328947368 0.534246575 760 10 1 1084 3L:5761746-5761848 7 942.5 1922 FBgn0016756 596.6966667 13.13 20.13333333 1.579529521 71.78217822 46.81291391 -2 -2 -2 0.2 dme-miR-11-3p 7mer-m1 TGTGATG 3L 576386 576392 + 3L_576386_576392_+ 0.612067728 0.612068644 0.612068186 6.36E-07 hipk FBtr0072552 574200 581099 3L + 576102 576567 3'utr hipk FlyBase G26826.1 TCGTAGTTAGAATTAAACTTAACTTTCGCGATAAAATAACCAAGCAGCAACTAATTTTTCGCCCTCCTGGGGTCGATTACTCGGTTGTCCCAACCGAGAATTTATTAAAATCGGTCCTTCGAGGGAGGCACTTCCTATATAATGAATTACATGCTGATACAAAGCAGAAATATTTAAACCATCCTTCGCCCCTTCCTAGATCAGCTGTGTACAGTAGGCTATTTTGGGATCGGGATCGAGATGAATCAACTCCGACGATTGGAAAAGATCTAGCATATAATTATTGTGATGTAGTTTTTAACGAGGAGCAGAGAAGTCCGCAAACGTTTTTTGTCAGTCGTCGTCGTCGTCGTCGGCGAATAGAAATTACCTAAAATTACGAATAACCAATTGCGATACGGATACGGAATATGCATCTATATGTTAACTAATTAGTGTGCAGGATTCAATAGCGTTAGCACGACAA 2062 576384 0.895443614 90 1833 20753 0.89198172 1.553680794 0.374740341 0.143549952 0.266306606 2062 201 59 2147 3L:576102-576567 7 hipk FBtr0072552 574200 581099 TGTGATG 7mer-m1 dme-miR-11-3p 3L + 576212 576418 3'utr hipk FlyBase G20292.1 TCGGTCCTTCGAGGGAGGCACTTCCTATATAATGAATTACATGCTGATACAAAGCAGAAATATTTAAACCATCCTTCGCCCCTTCCTAGATCAGCTGTGTACAGTAGGCTATTTTGGGATCGGGATCGAGATGAATCAACTCCGACGATTGGAAAAGATCTAGCATATAATTATTGTGATGTAGTTTTTAACGAGGAGCAGAGAAGT 1293 576384 0.863780343 34 1041 14107 0.799591002 1.28575173 0.440695297 0.373549884 0.585889571 1293 312 80 1564 3L:576212-576418 7 1390 1923 FBgn0035142 10724.84 157.7366667 241.6366667 0.129605663 8.81215528 5.752438234 2 2 2 0.2 dme-miR-970-3p 7mer-A1 CTTATGA 3L 577254 577260 + 3L_577254_577260_+ 0.764929704 0.786558692 0.775744198 0.015294013 hipk FBtr0072552 574200 581099 3L + 577196 577276 3'utr hipk FlyBase G26827.4 AAAACAAGAAAACAAATCATGAACGCTTTAAATGTAACAAAAACGAAACGTTAATAGACTTATGAAAACAACAAACAAATT 569 577250 0.958469704 11 552 2852 0.973611111 2.368596763 0.118055556 0.20913884 0.375 569 17 2 701 3L:577196-577276 7 hipk FBtr0072552 574200 581099 CTTATGA 7mer-A1 dme-miR-970-3p 3L + 577196 577277 3'utr hipk FlyBase G20296.1 AAAACAAGAAAACAAATCATGAACGCTTTAAATGTAACAAAAACGAAACGTTAATAGACTTATGAAAACAACAAACAAATTA 414 577250 0.954887489 10 405 2070 0.979166667 2.183981219 0.088141026 0.376811594 0.586538462 414 10 3 611 3L:577196-577277 7 460.5 1924 FBgn0035142 10724.84 157.7366667 241.6366667 0.042937703 2.919422666 1.905753818 4 4 4 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 5777529 5777535 - 3L_5777529_5777535_- 0.749322356 0.752712921 0.751017639 0.002397446 Myt1 FBtr0077118|FBtr0077118|FBtr0077118 5777474|5777474|5777474 5777763|5777763|5777763 3L - 5777515 5777584 3'utr Myt1 FlyBase G34629.1 AATGTTAATGCTTCTTTAGAAGAACTTGTTGAACTTGAACATATAATCATGTGATATATATACGAAAAGC 28 5777539 0.853584963 9 23 197 0.921052632 1.243038049 0.184210526 0.25 0.447368421 28 2 1 35 3L:5777515-5777584 7 Myt1 FBtr0077118|FBtr0077118|FBtr0077118 5777474|5777474|5777474 5777763|5777763|5777763 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 5777498 5777555 3'utr Myt1 FlyBase G26181.1 TGAACTTGAACATATAATCATGTGATATATATACGAAAAGCGATTTGAAAAGTTTAAA 21 5777538 0.970630995 7 17 157 0.814814815 1.041392685 0.074074074 0.238095238 0.407407407 21 4 1 22 3L:5777498-5777555 7 19 1925 FBgn0040298 171.3866667 10.89333333 16.77 0.110860433 1.744186047 1.132975552 4 3 3.5 0.2 dme-miR-932-5p 6mer2-7 GAATTG 3L 5799004 5799009 - 3L_5799004_5799009_- 0.952760814 0.92623363 0.939497222 0.018757563 S6k FBtr0077114|FBtr0333264 5798946|5797547 5800429|5800429 3L - 5798976 5799039 3'utr S6k FlyBase G34651.1 AAGATGTCAAATATAATCAAAAGGTGCTTTGAATTGTTTAAAAAGACAAGACAACTACAGATTA 144 5799011 0.716662542 11 139 1020 0.969512195 1.900367129 0.018292683 0.125 0.231707317 144 4 1 159 3L:5798976-5799039 6 S6k FBtr0077114|FBtr0333264 5798946|5797547 5800429|5800429 GAATTG 6mer2-7 dme-miR-932-5p 3L - 5798997 5799039 3'utr S6k FlyBase G26200.1 AAGATGTCAAATATAATCAAAAGGTGCTTTGAATTGTTTAAAA 82 5799011 0.721595786 5 78 582 0.962616822 2.012837225 0 0.219512195 0.401869159 82 4 0 103 3L:5798997-5799039 6 110.5 1926 FBgn0015806 3238.726667 104.32 160.0233333 0.034118347 1.059240798 0.690524299 2 2 2 0.2 dme-miR-184-3p 6mer2-7 CCGTCC 3L 5800382 5800387 - 3L_5800382_5800387_- 0.742408724 0.375986393 0.559197558 0.259099693 S6k FBtr0077114|FBtr0333264 5798946|5797547 5800429|5800429 3L - 5800333 5800416 3'utr S6k FlyBase G34656.1 TGCTTCCCAACCAACCAACCCATCCCATCCCGTCCGTTCCGTCGCAACCCAGCAACTGCATCATAAGCTTCCTCTCCCTACCCC 471 5800380 0.628897645 8 456 2075 0.972426471 2.121395681 0.011029412 0.133757962 0.25 471 12 3 529 3L:5800333-5800416 6 S6k FBtr0077114|FBtr0333264 5798946|5797547 5800429|5800429 CCGTCC 6mer2-7 dme-miR-184-3p 3L - 5800353 5800409 3'utr S6k FlyBase G26207.1 CAACCAACCAACCCATCCCATCCCGTCCGTTCCGTCGCAACCCAGCAACTGCATCAT 238 5800380 0.655634108 7 229 980 0.975935829 2.261262869 0.005347594 0.405063291 0.622994652 237 8 1 365 3L:5800353-5800409 6 347.5 1927 FBgn0015806 3238.726667 104.32 160.0233333 0.107295254 3.331096626 2.171558314 -7 -7 -7 0.2 dme-miR-33-5p 7mer-A1 AATGCAA 3L 5812155 5812161 + 3L_5812155_5812161_+ 0.781186061 0.781296192 0.781241127 7.79E-05 CG5537 FBtr0310534 5811928 5812228 3L + 5812008 5812208 intron-3'utr CG5537 FlyBase G28303.1 CCTGCGTTGCGCTCCACTAACAAATGCTACCCTCTCTCACTCTGTTTCGTCCTCCAGATTGCATTTGAGACACACAGACAAATAGACGACCCCTGCGGCCAACCAAACTACTACTTAGCAACTGTTAGCTTTTCACAACTGGCTTTTAATGCAACTCTCAAATACGTTACGTTCGTTACGCACTATTGTAAATATAGAAAC 178 5812132 0.991458247 29 170 1114 0.952606635 2.303196057 0.09478673 0.151685393 0.28436019 178 10 0 201 3L:5812008-5812208 7 CG5537 FBtr0310534 5811928 5812228 AATGCAA 7mer-A1 dme-miR-33-5p 3L + 5812042 5812172 intron-3'utr CG5537 FlyBase G21437.1 TCTCACTCTGTTTCGTCCTCCAGATTGCATTTGAGACACACAGACAAATAGACGACCCCTGCGGCCAACCAAACTACTACTTAGCAACTGTTAGCTTTTCACAACTGGCTTTTAATGCAACTCTCAAATAC 100 5812157 0.990433733 16 93 650 0.956521739 2.187520721 0.093167702 0.41 0.633540373 100 7 0 154 3L:5812042-5812172 7 44 1928 FBgn0035639 210.32 23.03 35.33333333 0.209205021 1.910551455 1.245283019 23 -2 10.5 0.2 dme-miR-252-5p 7mer-m8 GTACTTA 3L 582937 582943 - 3L_582937_582943_- 0.568518277 0.535577087 0.552047682 0.023292946 Kah FBtr0072563 582822 583983 3L - 582917 583044 3'utr Kah FlyBase G33052.1 CGATTCGACTCGATTCACTCCGATTCGATCTACAGCTCTACAGCTAATCGCACCAAAGATACTTCGATTTAGATGCGCACGCATACTACCTTTATTTACTCGTACTTACCATATACACCAAAAGATAT 70 582951 0.981867481 18 64 470 0.911392405 1.857332496 0.151898734 0.128571429 0.227848101 70 7 0 72 3L:582917-583044 7 Kah FBtr0072563 582822 583983 GTACTTA 7mer-m8 dme-miR-252-5p 3L - 582920 583041 3'utr Kah FlyBase G25000.1 TTCGACTCGATTCACTCCGATTCGATCTACAGCTCTACAGCTAATCGCACCAAAGATACTTCGATTTAGATGCGCACGCATACTACCTTTATTTACTCGTACTTACCATATACACCAAAAGA 62 582951 0.966015266 20 52 398 0.867346939 1.452297671 0.102040816 0.370967742 0.602040816 62 11 2 85 3L:582920-583041 7 4.5 1929 FBgn0035144 229 9.92 15.31333333 0.019650655 0.453629032 0.293861559 8 8 8 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3L 583302 583308 - 3L_583302_583308_- 0.661562975 0.661573363 0.661568169 7.35E-06 Kah FBtr0072563 582822 583983 3L - 583217 583365 3'utr Kah FlyBase G33054.1 AAGGCATTGATCGGCTTCCTGCTTCCGGCACGGAAGTCGTTCCAAAACGAGAGAATTTCTAGTCTTTATATTTAAATAAAGCGCACATTTGGCGAGATCGGGAGCATTCCCGATCCCATCCCCTTTTGTGCGTGGCGTTACTTTAAGCA 267 583309 0.864403061 18 255 2569 0.952229299 2.174641193 0.544585987 0.119850187 0.251592357 267 14 1 299 3L:583217-583365 7 Kah FBtr0072563 582822 583983 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3L - 583279 583327 3'utr Kah FlyBase G25003.1 GTTCCAAAACGAGAGAATTTCTAGTCTTTATATTTAAATAAAGCGCACA 180 583309 0.988777763 10 169 1757 0.948412698 1.679427897 0.511904762 0.3 0.5 180 9 4 239 3L:583279-583327 7 207.5 1930 FBgn0035144 229 9.92 15.31333333 0.906113537 20.91733871 13.55028298 1 1 1 0.2 dme-miR-31a-5p 7mer-A1 CTTGCCA 3L 583590 583596 - 3L_583590_583596_- 0.796732906 0.819861614 0.80829726 0.016354461 Kah FBtr0072563 582822 583983 3L - 583435 583745 3'utr Kah FlyBase G33055.2 CACAGCTCGTCGAACAGAAGAGTTCCCTCTTCTCGGAAAACTCCAAGGAAGGCGAGGTCATACACAGTAGATATAGAGAGACAAGGTTGGATCGATTCCCGATTGATCGTTTGATCTTCACTTAGTTGTAATAAGAGACTTCTTAGAGACTTGCCAAGAACAGCGACAAAAAACCAATGTAACCAGTATTTTTTTATAGCACATACGATTACCGATCGATCGGAGAGCGAAAGATATAGCATCCCAGCCCCAGACGATCGAACTCCGCAGCCAAGCTACAAACTTTACACATAGTCATCTAGCTTTATGAT 243 583603 0.983808384 46 227 1793 0.934782609 1.809559715 0.170289855 0.111111111 0.217391304 243 15 3 258 3L:583435-583745 7 Kah FBtr0072563 582822 583983 CTTGCCA 7mer-A1 dme-miR-31a-5p 3L - 583507 583705 3'utr Kah FlyBase G25007.1 CTCCAAGGAAGGCGAGGTCATACACAGTAGATATAGAGAGACAAGGTTGGATCGATTCCCGATTGATCGTTTGATCTTCACTTAGTTGTAATAAGAGACTTCTTAGAGACTTGCCAAGAACAGCGACAAAAAACCAATGTAACCAGTATTTTTTTATAGCACATACGATTACCGATCGATCGGAGAGCGAAAGATATAG 172 583603 0.984080487 37 158 1240 0.92519685 2.371067862 0.18503937 0.360465116 0.566929134 172 19 0 235 3L:583507-583705 7 67.5 1931 FBgn0035144 229 9.92 15.31333333 0.294759825 6.804435484 4.407923378 7 7 7 0.2 dme-bantam-3p 6mer3-8 TGATCT 3L 583629 583634 - 3L_583629_583634_- 0.694127204 0.68727179 0.690699497 0.0048475 Kah FBtr0072563 582822 583983 3L - 583435 583745 3'utr Kah FlyBase G33055.2 CACAGCTCGTCGAACAGAAGAGTTCCCTCTTCTCGGAAAACTCCAAGGAAGGCGAGGTCATACACAGTAGATATAGAGAGACAAGGTTGGATCGATTCCCGATTGATCGTTTGATCTTCACTTAGTTGTAATAAGAGACTTCTTAGAGACTTGCCAAGAACAGCGACAAAAAACCAATGTAACCAGTATTTTTTTATAGCACATACGATTACCGATCGATCGGAGAGCGAAAGATATAGCATCCCAGCCCCAGACGATCGAACTCCGCAGCCAAGCTACAAACTTTACACATAGTCATCTAGCTTTATGAT 243 583634 0.983808384 46 227 1793 0.934782609 1.809559715 0.170289855 0.111111111 0.217391304 243 15 3 258 3L:583435-583745 6 Kah FBtr0072563 582822 583983 TGATCT 6mer3-8 dme-bantam-3p 3L - 583507 583705 3'utr Kah FlyBase G25007.1 CTCCAAGGAAGGCGAGGTCATACACAGTAGATATAGAGAGACAAGGTTGGATCGATTCCCGATTGATCGTTTGATCTTCACTTAGTTGTAATAAGAGACTTCTTAGAGACTTGCCAAGAACAGCGACAAAAAACCAATGTAACCAGTATTTTTTTATAGCACATACGATTACCGATCGATCGGAGAGCGAAAGATATAG 172 583605 0.984080487 37 158 1240 0.92519685 2.371067862 0.18503937 0.360465116 0.566929134 172 19 0 235 3L:583507-583705 6 57.5 1932 FBgn0035144 229 9.92 15.31333333 0.251091703 5.796370968 3.754897693 0 -29 -14.5 0.2 dme-miR-184-5p 6mer3-8 TGATAA 3L 583807 583812 - 3L_583807_583812_- 0.507489065 0.520410253 0.513949659 0.009136668 Kah FBtr0072563 582822 583983 3L - 583749 583892 3'utr Kah FlyBase G33056.1 TGCCACTTAATCCAAGTCCTTTCACAGCCCACCAGCCACCACCAATCCAGGACATTTTCTTACTGTAGTCAACGAATATGTGATAATAATGCAAAAGAGCTAAAGTACCATTAGAGAGTAGATGATTCCAGAGCAAAGAGGAGC 148 583816 0.972201018 22 142 839 0.966292135 1.934498451 0.179775281 0.155405405 0.297752809 148 5 1 172 3L:583749-583892 6 Kah FBtr0072563 582822 583983 TGATAA 6mer3-8 dme-miR-184-5p 3L - 583755 583844 3'utr Kah FlyBase G25008.1 AGGACATTTTCTTACTGTAGTCAACGAATATGTGATAATAATGCAAAAGAGCTAAAGTACCATTAGAGAGTAGATGATTCCAGAGCAAAG 80 583816 0.721174301 13 74 436 0.938596491 1.552262523 0.192982456 0.3125 0.51754386 80 5 2 107 3L:583755-583844 6 82 1933 FBgn0035144 229 9.92 15.31333333 0.358078603 8.266129032 5.354810623 4 4 4 0.2 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3L 5928249 5928255 + 3L_5928249_5928255_+ 0.618022759 0.5925265 0.60527463 0.018028607 Vap-33B FBtr0306383 5926792 5930120 3L + 5928226 5928272 3'utr Vap-33B FlyBase G28311.1 CACCTTTGTCGATTCCGCTCCCATGGTGCTCAAGGAGACCAACATCA 12 5928249 0.967132978 3 12 66 1 1.146128036 0.071428571 0.166666667 0.285714286 12 0 0 14 3L:5928226-5928272 7 Vap-33B FBtr0306383 5926792 5930120 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3L + 5928224 5928263 3'utr Vap-33B FlyBase G21446.1 GTCACCTTTGTCGATTCCGCTCCCATGGTGCTCAAGGAGA 8 5928249 0.816999137 3 8 43 1 0.954242509 0.666666667 0.125 0.222222222 8 0 0 9 3L:5928224-5928263 7 10 1934 FBgn0053523 440.65 33.85333333 51.73666667 0.022693748 0.295391887 0.193286515 0 0 0 0.2 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 5929181 5929186 + 3L_5929181_5929186_+ 0.683331411 0.713078606 0.698205009 0.021034447 Vap-33B FBtr0306383 5926792 5930120 3L + 5929164 5929231 3'utr Vap-33B FlyBase G28313.1 GTGACGCTGGCGCTGTTGTTCCTGTTGTTTGCCGGCTTCGGCTTTCTGATGTACCAGCAGCTCGGCCA 16 5929180 0.989817243 6 14 141 0.9 0.954242509 0.65 0.125 0.3 16 1 1 18 3L:5929164-5929231 6 Vap-33B FBtr0306383 5926792 5930120 GTTCCT 6mer2-7 dme-miR-276a-3p 3L + 5929164 5929200 3'utr Vap-33B FlyBase G21448.1 GTGACGCTGGCGCTGTTGTTCCTGTTGTTTGCCGGCT 6 5929179 0.945783872 3 6 56 1 0.954242509 0.444444444 0.333333333 0.555555556 6 0 0 9 3L:5929164-5929200 6 9.5 1935 FBgn0053523 440.65 33.85333333 51.73666667 0.02155906 0.280622292 0.183622189 1 2 1.5 0.2 dme-miR-965-3p 8mer-A1 TACGCTTA 3L 5930509 5930516 - 3L_5930509_5930516_- 0.595216477 0.61486246 0.605039468 0.01389182 Rcc1 FBtr0077076|FBtr0077075|FBtr0077074 5930260|5930260|5930260 5930578|5930578|5930578 3L - 5930489 5930531 3'utr Rcc1 FlyBase G34677.2 TAAGTTACGAACCCGTACGCTTACCCTACGCTTAAGGAAGGCA 56 5930516 0.964751403 4 54 225 0.974025974 1.574031268 0.038961039 0.321428571 0.506493506 56 1 1 75 3L:5930489-5930531 8 Rcc1 FBtr0077076|FBtr0077075|FBtr0077074 5930260|5930260|5930260 5930578|5930578|5930578 TACGCTTA 8mer-A1 dme-miR-965-3p 3L - 5930446 5930530 3'utr Rcc1 FlyBase G26227.1 AAGTTACGAACCCGTACGCTTACCCTACGCTTAAGGAAGGCAATGAGTAGCCCAGATTCGTAAGATAGATCGGAAATTTTGCTTA 55 5930516 0.963896102 8 53 212 0.962025316 1.880813592 0.063291139 0.381818182 0.569620253 55 3 0 76 3L:5930446-5930530 8 53 1936 FBgn0002638 1072.403333 62.51333333 96.14666667 0.049421704 0.847819132 0.551241159 0 0 0 0.2 dme-miR-965-3p 6mer3-8 TACGCT 3L 5930560 5930565 - 3L_5930560_5930565_- 0.980004792 0.916708321 0.948356556 0.044757384 Rcc1 FBtr0077076|FBtr0077075|FBtr0077074 5930260|5930260|5930260 5930578|5930578|5930578 3L - 5930537 5930602 stop_codon Rcc1 FlyBase G34678.1 AAGCGGGGCGGTAAAAAGACATAAGATTGAGTATAAATACGCTGACTTTCCCACTTTGTTTTTGGT 28 5930565 0.949735432 7 26 167 0.939393939 1.491361694 0.454545455 0.178571429 0.303030303 28 2 0 31 3L:5930537-5930602 6 Rcc1 FBtr0077076|FBtr0077075|FBtr0077074 5930260|5930260|5930260 5930578|5930578|5930578 TACGCT 6mer3-8 dme-miR-965-3p 3L - 5930546 5930601 stop_codon Rcc1 FlyBase G26228.1 AGCGGGGCGGTAAAAAGACATAAGATTGAGTATAAATACGCTGACTTTCCCACTTT 25 5930565 0.837341976 6 21 143 0.888888889 1.505149978 0.555555556 0.36 0.555555556 25 4 0 32 3L:5930546-5930601 6 19 1937 FBgn0002638 1072.403333 62.51333333 96.14666667 0.017717215 0.30393516 0.197614755 0 0 0 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 6096463 6096469 + 3L_6096463_6096469_+ 0.788752473 0.7878122 0.788282337 0.000664893 loj FBtr0301446|FBtr0301446|FBtr0301446|FBtr0301447|FBtr0301447|FBtr0301447|FBtr0301448|FBtr0301448|FBtr0301448 6096261|6096261|6096261|6096261|6096261|6096261|6096261|6096261|6096261 6096517|6096517|6096517|6096517|6096517|6096517|6096517|6096517|6096517 3L + 6096368 6096486 3'utr loj FlyBase G28326.1 ATTTTATCACTGGCTAATTGATCAAGCGCAACTGAGCAGACTTTTTTATAATTGGGACTACTTATGTCATACGAGTTATAGACAGCAAAACTTATTGTGATAAGTGTACATTTGTGTGT 291 6096461 0.983343739 20 277 2110 0.95923913 1.50638202 0.41576087 0.223367698 0.385869565 291 5 10 353 3L:6096368-6096486 7 loj FBtr0301447|FBtr0301447|FBtr0301447|FBtr0301448|FBtr0301448|FBtr0301448|FBtr0301446|FBtr0301446|FBtr0301446 6096261|6096261|6096261|6096261|6096261|6096261|6096261|6096261|6096261 6096517|6096517|6096517|6096517|6096517|6096517|6096517|6096517|6096517 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 6096386 6096480 3'utr loj FlyBase G21456.1 TGATCAAGCGCAACTGAGCAGACTTTTTTATAATTGGGACTACTTATGTCATACGAGTTATAGACAGCAAAACTTATTGTGATAAGTGTACATTT 197 6096461 0.771146132 16 181 1386 0.935153584 1.437750563 0.464163823 0.370558376 0.576791809 197 10 9 274 3L:6096386-6096480 7 144.5 1938 FBgn0061492 141.6666667 16.32666667 25.11333333 1.02 8.850551245 5.753915583 2 2 2 0.2 dme-miR-12-5p 7mer-m8 AATACTC 3L 6169335 6169341 - 3L_6169335_6169341_- 0.64297963 0.674379885 0.658679757 0.022203365 CG10289 FBtr0331790|FBtr0077019 6164914|6167311 6169800|6169800 3L - 6169256 6169403 3'utr CG10289 FlyBase G34702.1 AAGAAAACTGTATTTTGTTTGTAATATGTATTAGTCTGTCGATTTAGTACGCTTTTACTTTCAATACTCTCAATGTGTTAGGCAACCTATGAGCATTACTTAAAGTACCAAAATTCACGCAACGTTTAGAATGCTTAGTTTATATTTG 47 6169348 0.98962322 17 43 418 0.909090909 1.397940009 0.181818182 0.14893617 0.272727273 47 4 1 50 3L:6169256-6169403 7 CG10289 FBtr0077019|FBtr0331790 6167311|6164914 6169800|6169800 AATACTC 7mer-m8 dme-miR-12-5p 3L - 6169302 6169366 3'utr CG10289 FlyBase G26239.1 GTCGATTTAGTACGCTTTTACTTTCAATACTCTCAATGTGTTAGGCAACCTATGAGCATTACTTA 14 6169339 0.988631932 5 10 124 0.8 1 0.4 0.428571429 0.68 14 4 1 20 3L:6169302-6169366 7 13.5 1939 FBgn0035688 1894.98 44.00666667 67.31 0.007124086 0.306771701 0.200564552 7 -2 2.5 0.2 dme-miR-995-5p 6mer3-8 AATTCG 3L 6178832 6178837 - 3L_6178832_6178837_- 0.952935287 0.965829005 0.959382146 0.009117223 CG10274 FBtr0113149 6178675 6179056 3L - 6178810 6178862 3'utr CG10274 FlyBase G34722.1 CAGGAGAACACAGAATACCTATGTGAATTCGACTTAAGTTTAATGATTCTGGT 26 6178835 0.971570844 4 24 144 0.942857143 1.041392685 0.171428571 0.269230769 0.457142857 26 0 2 33 3L:6178810-6178862 6 CG10274 FBtr0113149 6178675 6179056 AATTCG 6mer3-8 dme-miR-995-5p 3L - 6178821 6178861 3'utr CG10274 FlyBase G26257.2 AGGAGAACACAGAATACCTATGTGAATTCGACTTAAGTTTA 15 6178836 0.975184735 3 12 76 0.842105263 0.602059991 0.052631579 0.266666667 0.421052632 15 0 3 16 3L:6178821-6178861 6 16.5 1940 FBgn0035690 331.03 13.22333333 20.28333333 0.049844425 1.247794303 0.81347576 -2 -1 -1.5 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 6178851 6178857 + 3L_6178851_6178857_+ 0.625737562 0.661602549 0.643670055 0.025360314 CG7376 FBtr0331788 6178643 6178941 3L + 6178828 6178883 3'utr CG7376 FlyBase G28336.1 AAGTCGAATTCACATAGGTATTCTGTGTTCTCCTGAATAATGTACAGTATTATTTG 7 6178854 0.984311664 5 7 64 1 1.041392685 0.454545455 0.428571429 0.636363636 7 0 0 11 3L:6178828-6178883 7 CG7376 FBtr0331788 6178643 6178941 TGTGTTC 7mer-m8 dme-miR-317-3p 3L + 6178833 6178883 3'utr CG7376 FlyBase G21459.1 GAATTCACATAGGTATTCTGTGTTCTCCTGAATAATGTACAGTATTATTTG 7 6178848 0.990218748 6 7 68 1 1.041392685 0.363636364 0.428571429 0.636363636 7 0 0 11 3L:6178833-6178883 7 5.5 1941 FBgn0035689 292.97 8.566666667 13.15333333 0.018773253 0.642023346 0.418144957 -3 3 0 0.2 dme-miR-283-5p 6mer3-8 TGATAT 3L 6178942 6178947 - 3L_6178942_6178947_- 0.993627708 0.989332457 0.991480083 0.003037165 CG10274 FBtr0113149 6178675 6179056 3L - 6178930 6178971 3'utr CG10274 FlyBase G34724.1 AGAACAGTGTGTGTAAGATGGATATGATATAGTTTTAAGCTG 9 6178952 0.885437843 4 8 76 1 1.176091259 0.4 0.222222222 0.533333333 9 0 0 15 3L:6178930-6178971 6 CG10274 FBtr0113149 6178675 6179056 TGATAT 6mer3-8 dme-miR-283-5p 3L - 6178927 6178966 3'utr CG10274 FlyBase G26258.1 AGTGTGTGTAAGATGGATATGATATAGTTTTAAGCTGAAA 10 6178953 0.880486114 5 9 81 1 1.176091259 0.266666667 0.4 0.6 10 0 0 15 3L:6178927-6178966 6 8.5 1942 FBgn0035690 331.03 13.22333333 20.28333333 0.025677431 0.642803126 0.41906327 5 6 5.5 0.2 dme-bantam-3p 6mer3-8 TGATCT 3L 6182276 6182281 - 3L_6182276_6182281_- 0.999864046 0.999804309 0.999834177 4.22E-05 D19B FBtr0077017 6182174 6182416 3L - 6182243 6182307 3'utr D19B FlyBase G34732.1 CAACTAGTTTTCGTCACTTTGCAATTTGATCTTTTTTGTATTTAAATCCCCCCTTTAAACTGCTT 55 6182282 0.791990291 12 53 692 0.96969697 1.806179974 0.121212121 0.181818182 0.318181818 55 2 0 64 3L:6182243-6182307 6 D19B FBtr0077017 6182174 6182416 TGATCT 6mer3-8 dme-bantam-3p 3L - 6182234 6182299 3'utr D19B FlyBase G26262.1 TTTCGTCACTTTGCAATTTGATCTTTTTTGTATTTAAATCCCCCCTTTAAACTGCTTAAGTTTGTA 39 6182282 0.988137582 9 36 452 0.942307692 1.69019608 0.019230769 0.282051282 0.461538462 39 3 0 49 3L:6182234-6182299 6 41 1943 FBgn0022699 264.21 11.84 18.04333333 0.155179592 3.462837838 2.272307408 1 1 1 0.2 dme-miR-33-5p 7mer-m8 CAATGCA 3L 6186303 6186309 - 3L_6186303_6186309_- 0.661401102 0.658483333 0.659942218 0.002063196 D19A FBtr0077016 6185828 6186380 3L - 6186221 6186409 stop_codon D19A FlyBase G34743.1 TGGATGCCCTGAAGATCGACCACGTCTAGGCAGCAGGATTGGCTTTACTTTACTAGCATATATGCATCATAACCTAGCCACATCCATATGTATCCACTTCCAATGCAGCTGACACTGTCCGGAAAAGTTGTAGGCATGCCTCGAATTGCTCTCTAGCTGGATCAGATTGTAGGTTTATAGGCACTCCAG 89 6186306 0.975116679 19 88 566 0.990566038 2.021189299 0.141509434 0.168539326 0.301886792 89 1 0 105 3L:6186221-6186409 7 D19A FBtr0077016 6185828 6186380 CAATGCA 7mer-m8 dme-miR-33-5p 3L - 6186220 6186322 3'utr D19A FlyBase G26267.1 ATGTATCCACTTCCAATGCAGCTGACACTGTCCGGAAAAGTTGTAGGCATGCCTCGAATTGCTCTCTAGCTGGATCAGATTGTAGGTTTATAGGCACTCCAGA 39 6186306 0.927633539 10 38 257 0.983606557 1.77815125 0.213114754 0.435897436 0.639344262 39 1 0 60 3L:6186220-6186322 7 29 1944 FBgn0022935 233.1233333 8.756666667 13.45 0.124397672 3.311762467 2.156133829 -3 -3 -3 0.2 dme-miR-970-3p 6mer2-7 CTTATG 3L 6192360 6192365 - 3L_6192360_6192365_- 0.963806336 0.88160352 0.922704928 0.058126157 CG13298 FBtr0077015 6192122 6192480 3L - 6192342 6192386 3'utr CG13298 FlyBase G34750.1 TTTAGGGAACTTCTTGCTCTGCTTATGTGTATACCAAATTTTTGC 17 6192364 0.973666618 5 16 148 1 1.301029996 0.1 0.176470588 0.3 17 0 0 20 3L:6192342-6192386 6 CG13298 FBtr0077015 6192122 6192480 CTTATG 6mer2-7 dme-miR-970-3p 3L - 6192347 6192387 3'utr CG13298 FlyBase G26271.1 GTTTAGGGAACTTCTTGCTCTGCTTATGTGTATACCAAATT 11 6192364 0.596580178 6 11 102 1 1.230448921 0.058823529 0.272727273 0.529411765 11 0 0 17 3L:6192347-6192387 6 13 1945 FBgn0035692 547.6666667 75.45333333 115.9233333 0.023737066 0.172291924 0.112143083 -1 -1 -1 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 6198119 6198125 + 3L_6198119_6198125_+ 0.659426792 0.659101006 0.659263899 0.000230375 Trn FBtr0077001|FBtr0333059|FBtr0077002|FBtr0077000 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 3L + 6198007 6198175 3'utr Trn FlyBase G28355.1 AAGCTAGAGGATCTTTGATCTGTAGAACCTCTTTAGGCACACGACTGTCCGCTTACAGCATATAAAATGCCTTTCTTGTGCAGAAAACTTAGTAGGAACCACTAGAAAATTATGTGTTCCGGCCGTACTTAACCGGAGTCAGTGCTATAGCAGATATGCCCCATTCTCC 36 6198117 0.941499819 14 34 234 0.976190476 1.612783857 0.166666667 0.138888889 0.261904762 36 1 0 41 3L:6198007-6198175 7 Trn FBtr0077002|FBtr0077000|FBtr0077001|FBtr0333059 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 TGTGTTC 7mer-m8 dme-miR-317-3p 3L + 6198100 6198133 3'utr Trn FlyBase G21469.1 AGGAACCACTAGAAAATTATGTGTTCCGGCCGTA 7 6198116 0.781381192 2 7 40 1 0.954242509 0.555555556 0.285714286 0.444444444 7 0 0 9 3L:6198100-6198133 7 11.5 1946 FBgn0024921 2762.84 61.57666667 94.85333333 0.004162384 0.186759054 0.121239809 2 3 2.5 0.2 dme-miR-304-5p 8mer-A1 TGAGATTA 3L 6198831 6198838 + 3L_6198831_6198838_+ 0.622199661 0.59983056 0.61101511 0.015817342 Trn FBtr0077001|FBtr0333059|FBtr0077002|FBtr0077000 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 3L + 6198812 6198849 3'utr Trn FlyBase G28359.1 TAGGGAAACATTGTAAAATTGAGATTAGGATTTTGTTG 19 6198830 0.795807157 6 18 138 0.961538462 1.397940009 0.115384615 0.368421053 0.538461538 19 1 0 25 3L:6198812-6198849 8 Trn FBtr0077002|FBtr0077000|FBtr0077001|FBtr0333059 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 TGAGATTA 8mer-A1 dme-miR-304-5p 3L + 6198809 6198859 3'utr Trn FlyBase G21473.1 AAATAGGGAAACATTGTAAAATTGAGATTAGGATTTTGTTGAATATCTTAT 17 6198830 0.969663796 4 16 137 0.966666667 1.462397998 0.2 0.411764706 0.666666667 17 1 0 29 3L:6198809-6198859 8 18 1947 FBgn0024921 2762.84 61.57666667 94.85333333 0.006515035 0.292318519 0.189766657 1 1 1 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 3L 6198893 6198898 + 3L_6198893_6198898_+ 0.668825424 0.572190207 0.620507815 0.068331405 Trn FBtr0077001|FBtr0333059|FBtr0077002|FBtr0077000 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 3L + 6198865 6198920 3'utr Trn FlyBase G28360.1 TTCCATTAACTGAATACAAAAGCAACCATTGACTGATCACTTTTTAAAGTATTATT 137 6198893 0.829518982 9 131 540 0.955307263 1.278753601 0 0.233576642 0.413407821 137 0 8 171 3L:6198865-6198920 6 Trn FBtr0077002|FBtr0077000|FBtr0077001|FBtr0333059 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 TTGACT 6mer3-8 dme-miR-1012-3p 3L + 6198862 6198972 3'utr Trn FlyBase G21474.1 ATTTTCCATTAACTGAATACAAAAGCAACCATTGACTGATCACTTTTTAAAGTATTATTATATAATTTTTTTTTGTATAGGGACAAGTGTAATTAATGAACTATTATTATT 130 6198893 0.916817379 13 126 530 0.978947368 2.269512944 0.031578947 0.315384615 0.531578947 130 4 0 186 3L:6198862-6198972 6 127 1948 FBgn0024921 2762.84 61.57666667 94.85333333 0.045967193 2.06246955 1.338909193 0 0 0 0.2 dme-miR-304-5p 7mer-A1 GAGATTA 3L 6486510 6486516 - 3L_6486510_6486516_- 0.762145413 0.533072516 0.647608965 0.161979001 CG10147 FBtr0333060 6486165 6486934 3L - 6486483 6486522 3'utr CG10147 FlyBase G34827.1 CAAGAAGAGATTATGAATGGAGACAATAACCCTTAATAAC 5 6486507 0.81015869 4 5 19 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 3L:6486483-6486522 7 CG10147 FBtr0333060 6486165 6486934 GAGATTA 7mer-A1 dme-miR-304-5p 3L - 6486482 6486521 3'utr CG10147 FlyBase G26353.1 AAGAAGAGATTATGAATGGAGACAATAACCCTTAATAACA 6 6486508 0.91971515 4 6 22 1 0.77815125 0 0 0 6 0 0 6 3L:6486482-6486521 7 4.5 1949 FBgn0035702 164.6666667 9.066666667 13.86666667 0.027327935 0.496323529 0.324519231 -9 -8 -8.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 651643 651649 - 3L_651643_651649_- 0.66647678 0.699025487 0.682751133 0.023015406 CG3402 FBtr0072559|FBtr0072559|FBtr0072559 651540|651540|651540 652087|652087|652087 3L - 651556 651697 3'utr CG3402 FlyBase G33073.1 AGCCGAACGCAGAGTTGTTGAAAGAAACATACATTCATAGTACATACTTGTGATAAATGACTTTAACTGTGCAGATATGTGCGAAGAAGGCGCATCACTTAAGTTTAAAATTGAGTTTTTAATGTTATATTGCATTTGAATA 219 651650 0.984923939 18 198 1606 0.896296296 1.383815366 0.103703704 0.168949772 0.325925926 219 19 9 242 3L:651556-651697 7 CG3402 FBtr0072559|FBtr0072559|FBtr0072559 651540|651540|651540 652087|652087|652087 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 651593 651675 3'utr CG3402 FlyBase G25015.1 AGAAACATACATTCATAGTACATACTTGTGATAAATGACTTTAACTGTGCAGATATGTGCGAAGAAGGCGCATCACTTAAGTT 158 651650 0.879725045 11 140 1146 0.87398374 1.101989539 0.166666667 0.411392405 0.62195122 158 15 16 215 3L:651593-651675 7 176 1950 FBgn0035148 1763.92 212.3 323.94 0.099777768 0.829015544 0.54331049 1 1 1 0.2 dme-miR-986-5p 7mer-m8 ATTCGAG 3L 657921 657927 + 3L_657921_657927_+ 0.582293708 0.574599861 0.578446785 0.005440338 Rev1 FBtr0072557 657793 657971 3L + 657848 657957 3'utr Rev1 FlyBase G26877.1 TAATGTAACGCCAAGCTATGAATGCGGCCAGCTGATAATGTTAATGAGCCATTAGTTTATAAGCCATCCATTAATTCGAGCCAAAAATAAAACATTCTGGTAAAGAAAAT 60 657921 0.982377421 15 47 355 0.763157895 1.161368002 0.065789474 0.166666667 0.342105263 60 15 3 58 3L:657848-657957 7 Rev1 FBtr0072557 657793 657971 ATTCGAG 7mer-m8 dme-miR-986-5p 3L + 657841 657938 3'utr Rev1 FlyBase G20338.1 ATTATAATAATGTAACGCCAAGCTATGAATGCGGCCAGCTGATAATGTTAATGAGCCATTAGTTTATAAGCCATCCATTAATTCGAGCCAAAAATAAA 42 657920 0.980466558 13 34 240 0.828125 1.72427587 0.078125 0.380952381 0.59375 42 11 0 53 3L:657841-657938 7 23.5 1951 FBgn0035150 1798.706667 67.56666667 104.0266667 0.013064943 0.347804637 0.225903614 0 1 0.5 0.2 dme-miR-34-5p 6mer3-8 CACTGC 3L 6689797 6689802 - 3L_6689797_6689802_- 0.999069905 0.999074775 0.99907234 3.46E-06 SP1173 FBtr0076960|FBtr0076959|FBtr0076961|FBtr0076958 6689697|6689325|6689325|6689325 6689965|6689965|6689965|6689965 3L - 6689780 6689812 3'utr SP1173 FlyBase G34844.1 TTGAGGGCAACACTGCTAATAGTTTGTAATGCG 6 6689796 0.797776776 2 6 37 1 0.903089987 0 0.333333333 0.5 6 0 0 8 3L:6689780-6689812 6 SP1173 FBtr0076961|FBtr0076958|FBtr0076960|FBtr0076959 6689325|6689325|6689697|6689325 6689965|6689965|6689965|6689965 CACTGC 6mer3-8 dme-miR-34-5p 3L - 6689714 6689811 3'utr SP1173 FlyBase G26364.1 TGAGGGCAACACTGCTAATAGTTTGTAATGCGTATTTTTGCTAAGTGTATACACCAGGAGGATGAAAAGCAAAGGAGTGGAGACGATTAAAACAAAAA 9 6689796 0.980786037 7 9 66 1 1.113943352 0.307692308 0.333333333 0.538461538 9 0 0 13 3L:6689714-6689811 6 4.5 1952 FBgn0035710 0.666666667 0.03 0.043333333 6.75 150 103.8461538 -6 -6 -6 0.2 dme-miR-283-5p 7mer-m8 TGATATT 3L 6689873 6689879 - 3L_6689873_6689879_- 0.614447776 0.618108233 0.616278005 0.002588294 SP1173 FBtr0076960|FBtr0076959|FBtr0076961|FBtr0076958 6689697|6689325|6689325|6689325 6689965|6689965|6689965|6689965 3L - 6689828 6689892 3'utr SP1173 FlyBase G34845.1 AATCGAGTGCGAATGATATTCTTAGTTTTTAAATGTGTACACCACGCCTCGTCCTCCTCCACCTA 17 6689871 0.988633972 7 16 151 1 1.230448921 0.352941176 0 0 17 0 0 17 3L:6689828-6689892 7 SP1173 FBtr0076961|FBtr0076958|FBtr0076960|FBtr0076959 6689325|6689325|6689697|6689325 6689965|6689965|6689965|6689965 TGATATT 7mer-m8 dme-miR-283-5p 3L - 6689853 6689894 3'utr SP1173 FlyBase G26365.1 CAAATCGAGTGCGAATGATATTCTTAGTTTTTAAATGTGTAC 12 6689871 0.724554945 4 11 130 0.928571429 0.812913357 0.642857143 0.166666667 0.285714286 12 0 1 13 3L:6689853-6689894 7 12 1953 FBgn0035710 0.666666667 0.03 0.043333333 18 400 276.9230769 -8 -8 -8 0.2 dme-bantam-3p 7mer-A1 GATCTCA 3L 6739185 6739191 - 3L_6739185_6739191_- 0.787422154 0.823170869 0.805296511 0.025278148 dikar FBtr0303751 6738526 6740644 3L - 6739164 6739201 5'utr dikar FlyBase G34866.1 AAGTATTGCCGATCTCAGTCTGCCCTCGCCGGTGGCAC 15 6739183 0.721318932 4 15 101 1 1.230448921 0.176470588 0.133333333 0.235294118 15 0 0 17 3L:6739164-6739201 7 dikar FBtr0303751 6738526 6740644 GATCTCA 7mer-A1 dme-bantam-3p 3L - 6739164 6739201 5'utr dikar FlyBase G26378.1 AAGTATTGCCGATCTCAGTCTGCCCTCGCCGGTGGCAC 8 6739182 0.656678179 6 8 55 1 1.041392685 0.090909091 0.25 0.454545455 8 0 0 11 3L:6739164-6739201 7 11.5 1954 FBgn0261934 1905.406667 25.77666667 39.66 0.006035457 0.44613992 0.2899647 -8 -9 -8.5 0.2 dme-miR-965-3p 7mer-m8 TACGCTT 3L 6950083 6950089 - 3L_6950083_6950089_- 0.619721836 0.617196722 0.618459279 0.001785515 CG10077 FBtr0333083|FBtr0076940 6949489|6949489 6950329|6950329 3L - 6950037 6950178 3'utr CG10077 FlyBase G34895.1 ATGTTAGATGAGCGTCGGTGATGTACGTATCGTGTAGATCTCCTCCGCCCACATCATAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTTTTAATTTGATTAATCTCTTTGTTCCCCCCAAAACAAAACAAAACAA 460 6950061 0.982828116 29 428 3238 0.937172775 1.729974286 0.188481675 0.2 0.357766143 460 27 9 537 3L:6950037-6950178 7 CG10077 FBtr0076940|FBtr0333083 6949489|6949489 6950329|6950329 TACGCTT 7mer-m8 dme-miR-965-3p 3L - 6950039 6950186 3'utr CG10077 FlyBase G26404.1 GAGGGAAGATGTTAGATGAGCGTCGGTGATGTACGTATCGTGTAGATCTCCTCCGCCCACATCATAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTTTTAATTTGATTAATCTCTTTGTTCCCCCCAAAACAAAACAAAAC 374 6950061 0.979506461 28 359 2482 0.956603774 1.75076545 0.186792453 0.312834225 0.51509434 374 15 8 507 3L:6950039-6950186 7 143 1955 FBgn0035720 1853.276667 63.62 96.59333333 0.077160633 2.247720843 1.480433432 -28 -28 -28 0.2 dme-miR-282-5p 8mer-A1 AGAGGCTA 3L 6950305 6950312 - 3L_6950305_6950312_- 0.609744888 0.609761058 0.609752973 1.15E-05 CG10077 FBtr0333083|FBtr0076940 6949489|6949489 6950329|6950329 3L - 6950218 6950409 stop_codon CG10077 FlyBase G34896.1 CGCAGGCGGCACCCTATATGATGGCGAACGGCGGCGACATCTTTGCCTATCCGCCGCCTCCGCTGCCTGTGCAGAACTAGAGGCCCTGCGGTTCGATAGAGGCTACCAGATTGTAGACCAGCTCTACTGTAATTTCCTTTCCCCACACGAACATTACACGCACATCCGCACACCCACCCGTATTAATTGTAC 403 6950313 0.958740188 22 396 1912 0.985355649 2.673020907 0.40167364 0.153846154 0.286610879 403 7 0 471 3L:6950218-6950409 8 CG10077 FBtr0076940|FBtr0333083 6949489|6949489 6950329|6950329 AGAGGCTA 8mer-A1 dme-miR-282-5p 3L - 6950242 6950335 stop_codon CG10077 FlyBase G26405.1 AACTAGAGGCCCTGCGGTTCGATAGAGGCTACCAGATTGTAGACCAGCTCTACTGTAATTTCCTTTCCCCACACGAACATTACACGCACATCCG 202 6950313 0.889044747 12 196 983 0.98125 2.195899652 0.384375 0.405940594 0.625 202 5 1 314 3L:6950242-6950335 8 280.5 1956 FBgn0035720 1853.276667 63.62 96.59333333 0.151353549 4.408990883 2.903927117 1 1 1 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 3L 6952578 6952583 - 3L_6952578_6952583_- 0.980914247 0.638795371 0.809854809 0.241914523 CG10077 FBtr0300937 6951802 6953758 3L - 6952571 6952614 3'utr CG10077 FlyBase G34901.1 CATTTGCAACATTTTGCGGCCCAAGTATTTGTTGACTGATGATA 9 6952585 0.634934761 8 9 71 1 1 0 0.111111111 0.2 9 0 0 10 3L:6952571-6952614 6 CG10077 FBtr0300937 6951802 6953758 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 6952544 6952610 3'utr CG10077 FlyBase G26411.1 TGCAACATTTTGCGGCCCAAGTATTTGTTGACTGATGATAATTTTCTGTAGCTTATTTATGTATCAT 7 6952574 0.978764941 6 7 56 1 1 0.2 0.285714286 0.5 7 0 0 10 3L:6952544-6952610 6 3.5 1957 FBgn0035720 1853.276667 63.62 96.59333333 0.001888547 0.055014146 0.036234385 2 -9 -3.5 0.2 dme-miR-31a-5p 6mer3-8 TCTTGC 3L 6952884 6952889 - 3L_6952884_6952889_- 0.567716324 0.981313523 0.774514923 0.292457385 CG10077 FBtr0300937 6951802 6953758 3L - 6952775 6952963 3'utr CG10077 FlyBase G34903.1 AATGAGGGGAATGTGTTTGTTCTCCATGCATTGCTGGTTATATGATGTTGTTACTTTTAGTTCGTTTGTTGCTCTCTTGCTCATAGTTTTTAGTTGTGTCTCGTCAATCACATTTTGAGTAACTTAATTGTAAAAAAGCGATTTACTGTCAGTCAAGGAGTCAATGGCCAGCAAAATAATCTTAAAACA 29 6952886 0.992061641 17 25 293 0.9 1.431363764 0.066666667 0.034482759 0.066666667 29 3 0 27 3L:6952775-6952963 6 CG10077 FBtr0300937 6951802 6953758 TCTTGC 6mer3-8 dme-miR-31a-5p 3L - 6952839 6952926 3'utr CG10077 FlyBase G26412.1 TTATATGATGTTGTTACTTTTAGTTCGTTTGTTGCTCTCTTGCTCATAGTTTTTAGTTGTGTCTCGTCAATCACATTTTGAGTAACTT 11 6952886 0.992110176 8 11 120 1 1.146128036 0.071428571 0.181818182 0.357142857 11 0 0 14 3L:6952839-6952926 6 9 1958 FBgn0035720 1853.276667 63.62 96.59333333 0.004856264 0.141464948 0.093174132 -3 -3 -3 0.2 dme-miR-8-3p 7mer-m8 CAGTATT 3L 6960126 6960132 - 3L_6960126_6960132_- 0.661551964 0.661109528 0.661330746 0.000312895 sgl FBtr0076938 6959552 6960185 3L - 6959923 6960238 stop_codon sgl FlyBase G34914.2 AGTACCAGCGCACCGGACTGCTCCGCTCGTGGGGCATTGTGCCGCAGCTTTAGGCGCGTCGGGCGGCGGAGGTGGTGGCATTTACACTTAAAGTTGGCGAAATTTCCAGTATTTGCGAGACTAAACTGTAAATATCCGTATTCTTTTCTGTAGCTGAGTGTATGTTAGATTGGGTCGATTAAGCTTAAGTTGAATCATGTTTAGGAGAATAGAATCGTTTCAAATCATCAGAGGACTCTGTCAGTTTTAAGTGAAAAGTAAAGTTGAATTCTTGCATTTTGTATATTAGTTTCTAAAGGATATAAGCTTTTAAAAC 273 6960157 0.987713674 41 257 2333 0.941558442 1.860338007 0.217532468 0.10989011 0.211038961 273 15 3 290 3L:6959923-6960238 7 sgl FBtr0076938 6959552 6960185 CAGTATT 7mer-m8 dme-miR-8-3p 3L - 6960047 6960247 stop_codon sgl FlyBase G26419.1 TCGGCAAGAAGTACCAGCGCACCGGACTGCTCCGCTCGTGGGGCATTGTGCCGCAGCTTTAGGCGCGTCGGGCGGCGGAGGTGGTGGCATTTACACTTAAAGTTGGCGAAATTTCCAGTATTTGCGAGACTAAACTGTAAATATCCGTATTCTTTTCTGTAGCTGAGTGTATGTTAGATTGGGTCGATTAAGCTTAAGTTG 155 6960157 0.986679355 32 146 1262 0.948356808 1.828230115 0.234741784 0.309677419 0.497652582 155 9 2 202 3L:6960047-6960247 7 65 1959 FBgn0261445 3785.826667 203.07 312.6666667 0.017169302 0.32008667 0.207889126 25 25 25 0.2 dme-miR-8-3p 7mer-A1 AGTATTA 3L 6973292 6973298 - 3L_6973292_6973298_- 0.820316867 0.823349561 0.821833214 0.002144443 Galphai FBtr0076934 6972748 6973342 3L - 6973232 6973460 stop_codon Galphai FlyBase G34930.2 AAAGGAGATATACACGCATCTCACCTGCGCCACGGATACGAACAACGTGAAGTTCGTCTTCGATGCCGTCACCGATGTGATCATCAAGAACAATCTGAAACAAATTGGCTTATTCTGAGAGGGCGGCGGAGCACAAGATCATCATTATTTAGCTGGCGTCGTAGTATTAAAGGAAAACGCGCATAAACATTTCCATTAAACGCTAAGAACTCGATACATTTACGCTCGT 78 6973312 0.878313935 29 70 453 0.909090909 1.602059991 0.147727273 0.128205128 0.227272727 78 7 1 80 3L:6973232-6973460 7 Galphai FBtr0076934 6972748 6973342 AGTATTA 7mer-A1 dme-miR-8-3p 3L - 6973286 6973461 stop_codon Galphai FlyBase G26431.1 AAAAGGAGATATACACGCATCTCACCTGCGCCACGGATACGAACAACGTGAAGTTCGTCTTCGATGCCGTCACCGATGTGATCATCAAGAACAATCTGAAACAAATTGGCTTATTCTGAGAGGGCGGCGGAGCACAAGATCATCATTATTTAGCTGGCGTCGTAGTATTAAAGGAA 48 6973301 0.964731954 19 40 282 0.835616438 1.183269844 0.164383562 0.333333333 0.561643836 48 9 3 61 3L:6973286-6973461 7 16.5 1960 FBgn0001104 5741.72 340.2133333 523.18 0.002873703 0.048498981 0.031537903 14 3 8.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 7123385 7123390 - 3L_7123385_7123390_- 0.730949444 0.730949125 0.730949285 2.12E-07 msl-3 FBtr0076926|FBtr0076926|FBtr0076926 7123211|7123211|7123211 7123532|7123532|7123532 3L - 7123373 7123404 3'utr msl-3 FlyBase G34937.1 AAAAAGTTTCCTAATGTGATCGTATAATCGAA 10 7123397 0.658593152 5 10 81 1 1.146128036 0.071428571 0.3 0.5 10 0 0 14 3L:7123373-7123404 6 msl-3 FBtr0076926|FBtr0076926|FBtr0076926 7123211|7123211|7123211 7123532|7123532|7123532 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 7123362 7123405 3'utr msl-3 FlyBase G26438.1 AAAAAAGTTTCCTAATGTGATCGTATAATCGAATAATGCCTATA 5 7123395 0.989834517 3 4 43 0.833333333 0.698970004 0 0.2 0.333333333 5 1 0 5 3L:7123362-7123405 6 7.5 1961 FBgn0002775 342.2933333 21.25 32.62333333 0.021911031 0.352941176 0.229896802 7 5 6 0.2 dme-miR-14-3p 6mer3-8 AAGACT 3L 7326478 7326483 - 3L_7326478_7326483_- 0.711601559 0.972417183 0.842009371 0.184424479 CG8602 FBtr0076884 7326271 7326891 3L - 7326464 7326496 3'utr CG8602 FlyBase G34969.1 ACAAAAAACATTCAAGACTTGTGCGCCTAGAGC 11 7326475 0.740006783 4 11 51 1 1.176091259 0 0.363636364 0.533333333 11 0 0 15 3L:7326464-7326496 6 CG8602 FBtr0076884 7326271 7326891 AAGACT 6mer3-8 dme-miR-14-3p 3L - 7326450 7326494 3'utr CG8602 FlyBase G26456.1 AAAAAACATTCAAGACTTGTGCGCCTAGAGCAACGAATTGCTATT 12 7326475 0.953117455 5 12 54 1 1.278753601 0 0.416666667 0.631578947 12 0 0 19 3L:7326450-7326494 6 11 1962 FBgn0035763 925.6666667 44.84666667 68.68666667 0.011883327 0.245280214 0.16014753 -8 -8 -8 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 7329872 7329878 + 3L_7329872_7329878_+ 0.566890977 0.562796854 0.564843916 0.002894966 CG42307 FBtr0299691|FBtr0344452|FBtr0299692 7329590|7329590|7329590 7333471|7333471|7333471 3L + 7329847 7329896 3'utr CG42307 FlyBase G28429.1 AAATCAAACCAATACGCACCAGCAATGTGTTCGAAAAACCTGGGCCCAAG 25 7329872 0.833473219 5 24 100 0.962962963 1.414973348 0.074074074 0.08 0.148148148 25 1 0 26 3L:7329847-7329896 7 CG42307 FBtr0299692|FBtr0344452|FBtr0299691 7329590|7329590|7329590 7333471|7333471|7333471 TGTGTTC 7mer-m8 dme-miR-317-3p 3L + 7329847 7329893 3'utr CG42307 FlyBase G21514.1 AAATCAAACCAATACGCACCAGCAATGTGTTCGAAAAACCTGGGCCC 13 7329872 0.904467857 3 12 53 0.933333333 1.146128036 0 0.153846154 0.266666667 13 1 0 14 3L:7329847-7329893 7 19 1963 FBgn0259203 453.5333333 57.31 87.29333333 0.041893282 0.331530274 0.217656942 0 0 0 0.2 dme-miR-252-5p 7mer-m8 GTACTTA 3L 7333319 7333325 + 3L_7333319_7333325_+ 0.566334199 0.586012727 0.576173463 0.013914801 CG42307 FBtr0299691|FBtr0344452|FBtr0299692 7329590|7329590|7329590 7333471|7333471|7333471 3L + 7333296 7333383 3'utr CG42307 FlyBase G28431.1 TCTACAAGTTATGGAATTTCATTGTACTTATACCTAACTTTGAATGCATTGAATTATTTTCTAGTATTTACCTTATATTGTATTATTG 15 7333318 0.809788193 7 13 157 0.875 1.146128036 0.25 0.066666667 0.125 15 2 0 14 3L:7333296-7333383 7 CG42307 FBtr0299692|FBtr0344452|FBtr0299691 7329590|7329590|7329590 7333471|7333471|7333471 GTACTTA 7mer-m8 dme-miR-252-5p 3L + 7333306 7333365 3'utr CG42307 FlyBase G21516.1 ATGGAATTTCATTGTACTTATACCTAACTTTGAATGCATTGAATTATTTTCTAGTATTTA 12 7333318 0.991224745 4 10 108 0.888888889 1.204119983 0.055555556 0.416666667 0.611111111 12 2 0 16 3L:7333306-7333365 7 9 1964 FBgn0259203 453.5333333 57.31 87.29333333 0.019844186 0.157040656 0.103100657 1 1 1 0.2 dme-miR-184-3p 7mer-A1 CCGTCCA 3L 7333767 7333773 - 3L_7333767_7333773_- 0.801815386 0.80298913 0.802402258 0.000829931 CG43780 FBtr0331507|FBtr0331508 7333542|7333542 7334274|7334274 3L - 7333577 7333929 3'utr CG43780 FlyBase G34984.1 AAGAGCCCACTAACCCGTCTGCACCCACCAACCATATCAGTTTTGCATGCAGTACAAATAGTTTCATTAGCAACCAGTTTTGTTCGAGCCGATTCCATTCCATTAATCGCAATCTGACAATGTGCCTTTCACGTAGAGACTCGTAAGAAATTTATACCGTCCAAGTGTCTTTTCTAGCGCCGTAAGATCGAATTGTATTTTTACATTTAATACCCATTTAGGGTAGTCTGTCTACAGATGCTGCATTTAATGTTGTCCAATATTCTACTCGTATGAAAATATCAGTGTCTTGTATCTACTACAAACTCTATACATTTGTATTCGTCCATTAGTTTTGTAATATTGTATTTTGA 1024 7333775 0.879387613 70 996 7404 0.97492163 2.140577871 0.123040752 0.1875 0.347962382 1024 24 8 1244 3L:7333577-7333929 7 CG43780 FBtr0331508|FBtr0331507 7333542|7333542 7334274|7334274 CCGTCCA 7mer-A1 dme-miR-184-3p 3L - 7333662 7333927 3'utr CG43780 FlyBase G26467.3 GAGCCCACTAACCCGTCTGCACCCACCAACCATATCAGTTTTGCATGCAGTACAAATAGTTTCATTAGCAACCAGTTTTGTTCGAGCCGATTCCATTCCATTAATCGCAATCTGACAATGTGCCTTTCACGTAGAGACTCGTAAGAAATTTATACCGTCCAAGTGTCTTTTCTAGCGCCGTAAGATCGAATTGTATTTTTACATTTAATACCCATTTAGGGTAGTCTGTCTACAGATGCTGCATTTAATGTTGTCCAATATTCTAC 825 7333775 0.876668664 50 799 5386 0.967585089 2.298853076 0.132090762 0.349090909 0.564829822 825 35 5 1194 3L:7333662-7333927 7 589.5 1965 FBgn0264302 77.98333333 6.63 10.06333333 7.559307544 88.91402715 58.57899967 2 2 2 0.2 dme-miR-34-5p 6mer2-7 ACTGCC 3L 7341923 7341928 - 3L_7341923_7341928_- 0.810030188 0.696895796 0.753462992 0.079998101 CG8596 FBtr0332733|FBtr0332732|FBtr0076881 7341882|7341882|7341882 7341977|7341977|7341977 3L - 7341902 7341941 3'utr CG8596 FlyBase G35011.1 ACATCGTTGCAATACTGCCCCTTAAACTAGCTTTAAAATA 11 7341928 0.744206599 5 10 71 0.928571429 1.113943352 0.071428571 0.181818182 0.357142857 11 1 0 13 3L:7341902-7341941 6 CG8596 FBtr0332732|FBtr0076881|FBtr0332733 7341882|7341882|7341882 7341977|7341977|7341977 ACTGCC 6mer2-7 dme-miR-34-5p 3L - 7341903 7341945 3'utr CG8596 FlyBase G26489.1 AGACACATCGTTGCAATACTGCCCCTTAAACTAGCTTTAAAAT 9 7341929 0.759191739 6 9 57 1 1.041392685 0 0.222222222 0.363636364 9 0 0 11 3L:7341903-7341945 6 9.5 1966 FBgn0035767 191.44 11.73333333 17.72 0.049623903 0.809659091 0.536117381 0 1 0.5 0.2 dme-miR-304-5p 7mer-m8 TGAGATT 3L 7352547 7352553 + 3L_7352547_7352553_+ 0.620200142 0.620202122 0.620201132 1.41E-06 qm FBtr0332729|FBtr0076846|FBtr0302045 7352392|7352392|7352392 7353622|7353622|7353622 3L + 7352526 7352567 5'utr qm FlyBase G28446.1 CTGCAGAAGCTGAAGATATTCTGAGATTTATGTTACCCTTTG 19 7352544 0.706644077 5 16 162 0.954545455 1.322219295 0.181818182 0.157894737 0.272727273 19 1 0 21 3L:7352526-7352567 7 qm FBtr0076846|FBtr0302045|FBtr0332729 7352392|7352392|7352392 7353622|7353622|7353622 TGAGATT 7mer-m8 dme-miR-304-5p 3L + 7352530 7352562 5'utr qm FlyBase G21526.1 AGAAGCTGAAGATATTCTGAGATTTATGTTACC 9 7352544 0.578140011 6 9 72 1 1.079181246 0 0.333333333 0.5 9 0 0 12 3L:7352530-7352562 7 12.5 1967 FBgn0019662 681.67 36.89 56.62 0.018337319 0.338845216 0.220770046 3 3 3 0.2 dme-miR-968-5p 6mer3-8 ACTACT 3L 7367135 7367140 - 3L_7367135_7367140_- 0.923158043 0.541517753 0.732337898 0.269860373 Sh3beta FBtr0076872|FBtr0302546|FBtr0076873 7366839|7366839|7366839 7367552|7367552|7367552 3L - 7367062 7367145 3'utr Sh3beta FlyBase G35047.1 TTATGACTACTGCGGTTCTTAAGCTAAGTTCATGAGCGTATTTAAACGAGGGCATTCGATTGTGTTGGCCCCCGGTGAAAAGAC 23 7367127 0.707315857 9 23 158 1 1.414973348 0.115384615 0.130434783 0.230769231 23 0 0 26 3L:7367062-7367145 6 Sh3beta FBtr0076873|FBtr0302546|FBtr0076872 7366839|7366839|7366839 7367552|7367552|7367552 ACTACT 6mer3-8 dme-miR-968-5p 3L - 7367091 7367153 3'utr Sh3beta FlyBase G26515.1 CGAATTCATTATGACTACTGCGGTTCTTAAGCTAAGTTCATGAGCGTATTTAAACGAGGGCAT 12 7367127 0.98595592 5 11 88 0.941176471 1.204119983 0.058823529 0.333333333 0.529411765 12 1 0 16 3L:7367091-7367153 6 11.5 1968 FBgn0035772 3075.326667 262.2333333 402.8 0.00373944 0.043854074 0.028550149 -13 -13 -13 0.2 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 7372650 7372655 + 3L_7372650_7372655_+ 0.966513166 0.962687941 0.964600553 0.002704896 akirin FBtr0076849|FBtr0302545|FBtr0076848|FBtr0302543|FBtr0332730|FBtr0302544 7372590|7372590|7372590|7372590|7372590|7372590 7373711|7372783|7372783|7373711|7373711|7373711 3L + 7372615 7372704 3'utr akirin FlyBase G28467.1 CAGAAAGAAGAAATTAATAATTGCACTACGATCTTATGTGACGGTAGATCTACCGCGACAACAACAGCCCTCATAAACTATAACAAACAA 319 7372651 0.824285241 14 305 2285 0.960835509 2.565847819 0.274151436 0.169278997 0.308093995 319 15 0 368 3L:7372615-7372704 6 akirin FBtr0332730|FBtr0302544|FBtr0076848|FBtr0302543|FBtr0076849|FBtr0302545 7372590|7372590|7372590|7372590|7372590|7372590 7373711|7373711|7372783|7373711|7373711|7372783 ATGTGA 6mer3-8 dme-miR-1003-3p 3L + 7372620 7372709 3'utr akirin FlyBase G21547.1 AGAAGAAATTAATAATTGCACTACGATCTTATGTGACGGTAGATCTACCGCGACAACAACAGCCCTCATAAACTATAACAAACAACAAAT 242 7372651 0.960643368 14 229 1656 0.949602122 2.076761772 0.265251989 0.396694215 0.612732095 242 17 2 358 3L:7372620-7372709 6 266 1969 FBgn0082598 6331.316667 435.1366667 666.7366667 0.042013378 0.611302196 0.398958109 -1 -1 -1 0.2 dme-miR-965-3p 7mer-m8 TACGCTT 3L 7373545 7373551 + 3L_7373545_7373551_+ 0.576273714 0.565821069 0.571047391 0.007391104 akirin FBtr0076849|FBtr0302543|FBtr0332730|FBtr0302544 7372590|7372590|7372590|7372590 7373711|7373711|7373711|7373711 3L + 7373517 7373587 3'utr akirin FlyBase G28471.1 AAGTTAAATTGAACGCTTTCTTATAAAATACGCTTGACAGAAGATGTTTCATGTTCATTGCAATTATTTTT 121 7373545 0.984754637 13 115 903 0.958041958 1.835690571 0.244755245 0.157024793 0.286713287 121 5 1 137 3L:7373517-7373587 7 akirin FBtr0332730|FBtr0302544|FBtr0302543|FBtr0076849 7372590|7372590|7372590|7372590 7373711|7373711|7373711|7373711 TACGCTT 7mer-m8 dme-miR-965-3p 3L + 7373500 7373572 3'utr akirin FlyBase G21551.1 TATAAAAGTTATTCATTAAGTTAAATTGAACGCTTTCTTATAAAATACGCTTGACAGAAGATGTTTCATGTTC 70 7373545 0.981879236 9 68 504 0.968421053 1.963787827 0.210526316 0.285714286 0.473684211 70 3 0 92 3L:7373500-7373572 7 78 1970 FBgn0082598 6331.316667 435.1366667 666.7366667 0.012319712 0.179254027 0.116987716 0 0 0 0.2 dme-miR-283-5p 8mer-m1 TGATATTT 3L 7374497 7374504 - 3L_7374497_7374504_- 0.555591642 0.555590804 0.555591223 5.66E-07 SMSr FBtr0076870 7374048 7374593 3L - 7374434 7374536 3'utr SMSr FlyBase G35059.1 AAAGCAAACATGCAGAAACTAACCATACCGACTGATATTTTTATTTCGAAATTTCCATCGATCCCCTTCCTTTCACAGCTCTCCCCTGTATTATTGACAGCAT 85 7374501 0.74484519 15 78 602 0.923913043 1.452297671 0.141304348 0.070588235 0.141304348 85 5 2 85 3L:7374434-7374536 8 SMSr FBtr0076870 7374048 7374593 TGATATTT 8mer-m1 dme-miR-283-5p 3L - 7374487 7374548 3'utr SMSr FlyBase G26530.2 GTCGCTCTTCGAAAAGCAAACATGCAGAAACTAACCATACCGACTGATATTTTTATTTCGAA 40 7374511 0.976968592 5 36 228 0.964285714 1.73239376 0.071428571 0.375 0.553571429 40 2 0 54 3L:7374487-7374548 8 49.5 1971 FBgn0052380 477.4766667 22.27333333 34.04333333 0.103669987 2.222388506 1.454029178 -3 7 2 0.2 dme-miR-283-5p 8mer-m1 TGATATTT 3L 7432789 7432796 - 3L_7432789_7432796_- 0.555588646 0.552691957 0.554140301 0.002048206 Rac2 FBtr0332800 7432760 7433931 3L - 7432731 7432813 3'utr Rac2 FlyBase G35065.1 GATGTTAATTTATATACTGATATTTATGTTAAATAAATGCATACATTTTGCCAATTTGTTTTAACGAAAGAGAGCGAGCGGTA 18 7432800 0.990313268 12 18 182 1 1.322219295 0.285714286 0.166666667 0.285714286 18 0 0 21 3L:7432731-7432813 8 Rac2 FBtr0332800 7432760 7433931 TGATATTT 8mer-m1 dme-miR-283-5p 3L - 7432770 7432807 3'utr Rac2 FlyBase G26533.1 AATTTATATACTGATATTTATGTTAAATAAATGCATAC 8 7432799 0.947867172 4 8 76 1 1.204119983 0.0625 0.625 0.8125 8 0 0 16 3L:7432770-7432807 8 10.5 1972 FBgn0014011 1633.203333 85.34333333 130.3833333 0.006429083 0.123032457 0.080531765 4 3 3.5 0.2 dme-miR-7-5p 7mer-m8 GTCTTCC 3L 7432877 7432883 - 3L_7432877_7432883_- 0.690158045 0.683074024 0.686616034 0.005009144 Rac2 FBtr0332800 7432760 7433931 3L - 7432867 7432916 3'utr Rac2 FlyBase G35067.1 CGTGTGAATGTGTGTGTGTGTGTCTGATCAATGGTCTTCCCGCTCAACGC 26 7432885 0.844410001 3 23 227 0.9 1.130333768 0.733333333 0.153846154 0.266666667 26 2 1 27 3L:7432867-7432916 7 Rac2 FBtr0332800 7432760 7433931 GTCTTCC 7mer-m8 dme-miR-7-5p 3L - 7432817 7432997 3'utr Rac2 FlyBase G26534.1 TGGCCAATATCTGAACAATCGGGGAATGTGGGAAGCCGACAAAAAAAGAACTTTCATTTATACATATAGTATTTAGAGTTACGTGTGAATGTGTGTGTGTGTGTCTGATCAATGGTCTTCCCGCTCAACGCATTTGCCTGGACTTGATTTAATGTATACTAAATGCACAATTAGCCTCTAC 50 7432885 0.980889737 16 49 348 0.986486486 1.86332286 0.378378378 0.32 0.540540541 50 1 0 73 3L:7432817-7432997 7 21.5 1973 FBgn0014011 1633.203333 85.34333333 130.3833333 0.013164313 0.251923603 0.164898377 2 2 2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-m8 CTGTGAT 3L 753253 753259 + 3L_753253_753259_+ 0.60185604 0.59127816 0.5965671 0.007479634 emc FBtr0072578|FBtr0072578|FBtr0072578 752306|752306|752306 753492|753492|753492 3L + 753227 753288 3'utr emc FlyBase G26889.1 CCTATAAATATATATTAATATATGTTCTGTGATCTGTAGCATACTTTGTACAAAGTGTTTTT 1016 753260 0.66567851 18 959 10456 0.947533281 1.827512865 0.247454973 0.203740157 0.366483947 1016 50 17 1210 3L:753227-753288 7 emc FBtr0072578|FBtr0072578|FBtr0072578 752306|752306|752306 753492|753492|753492 CTGTGAT 7mer-m8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 753224 753287 3'utr emc FlyBase G20350.1 AAACCTATAAATATATATTAATATATGTTCTGTGATCTGTAGCATACTTTGTACAAAGTGTTTT 771 753261 0.715575089 17 727 7850 0.942783945 1.812520152 0.222886422 0.367055772 0.583262169 771 51 16 1104 3L:753224-753287 7 863 1974 FBgn0000575 1770.966667 105.6933333 162.6966667 0.487304485 8.165131828 5.304349608 -7 -8 -7.5 0.2 dme-miR-2a-2-5p 6mer3-8 TGATGA 3L 753408 753413 + 3L_753408_753413_+ 0.999978477 0.942236666 0.971107572 0.040829618 emc FBtr0072578 752306 753492 3L + 753398 753427 3'utr emc FlyBase G26891.1 AGAAAACATTTGATGATGTTGCGAAAAAAT 6 753411 0.793961073 3 6 38 1 0.954242509 0.333333333 0.333333333 0.555555556 6 0 0 9 3L:753398-753427 6 emc FBtr0072578 752306 753492 TGATGA 6mer3-8 dme-miR-2a-2-5p 3L + 753396 753422 3'utr emc FlyBase G20352.1 AAAGAAAACATTTGATGATGTTGCGAA 5 753413 0.854041908 2 4 24 1 0.84509804 0.142857143 0.4 0.571428571 5 0 0 7 3L:753396-753422 6 5 1975 FBgn0000575 1770.966667 105.6933333 162.6966667 0.002823317 0.047306673 0.030732037 -3 -5 -4 0.2 dme-miR-965-3p 6mer3-8 TACGCT 3L 7777471 7777476 - 3L_7777471_7777476_- 0.973593495 0.957211448 0.965402471 0.011583894 CG32369 FBtr0304992 7777103 7778469 3L - 7777455 7777499 3'utr CG32369 FlyBase G35102.1 ATGAACCTATATATAAAGTGCTATACGCTAAATGCTTATTTCTGT 25 7777476 0.837950856 4 25 169 1 1.491361694 0 0.16 0.322580645 25 0 0 31 3L:7777455-7777499 6 CG32369 FBtr0304992 7777103 7778469 TACGCT 6mer3-8 dme-miR-965-3p 3L - 7777449 7777577 3'utr CG32369 FlyBase G26553.1 CTGAACTATGTCCCTCTCTATAACACCCCTACTCTCTCTTGATTATGCTTAGGCTAACTAAATGATATGCTCACCTATATGAACCTATATATAAAGTGCTATACGCTAAATGCTTATTTCTGTATTCGT 18 7777476 0.982965206 8 17 126 1 1.380211242 0.041666667 0.277777778 0.458333333 18 0 0 24 3L:7777449-7777577 6 17 1976 FBgn0052369 1823.153333 38.16 58.06666667 0.009324504 0.445492662 0.292766935 0 0 0 0.2 dme-miR-92b-3p 7mer-A1 TGCAATA 3L 7777742 7777748 - 3L_7777742_7777748_- 0.736974309 0.782265191 0.75961975 0.032025503 CG32369 FBtr0304992 7777103 7778469 3L - 7777721 7777757 3'utr CG32369 FlyBase G35105.1 AAGACAATCTGCAATATTTTTTTGATATACCTAAACG 6 7777750 0.990802709 3 4 45 0.714285714 0.698970004 0 0.166666667 0.285714286 6 2 0 5 3L:7777721-7777757 7 CG32369 FBtr0304992 7777103 7778469 TGCAATA 7mer-A1 dme-miR-92b-3p 3L - 7777724 7777772 3'utr CG32369 FlyBase G26555.1 AGCGGCTGGAACTCTAAGACAATCTGCAATATTTTTTTGATATACCTAA 5 7777750 0.990979677 3 4 51 0.8 0.602059991 0.2 0 0 5 1 0 4 3L:7777724-7777772 7 5 1977 FBgn0052369 1823.153333 38.16 58.06666667 0.002742501 0.131027254 0.086107922 2 2 2 0.2 dme-bantam-3p 7mer-A1 GATCTCA 3L 7814496 7814502 - 3L_7814496_7814502_- 0.755554677 0.809948039 0.782751358 0.038461871 Pdp1 FBtr0076775|FBtr0076777|FBtr0306535|FBtr0300500|FBtr0346536|FBtr0076776|FBtr0076782|FBtr0332082|FBtr0332081|FBtr0076780|FBtr0332083|FBtr0332080|FBtr0300499 7814335|7814335|7811456|7814335|7811913|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335 7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325 3L - 7814478 7814526 3'utr Pdp1 FlyBase G35131.1 AATATATAATGAAAACCATACATGGATCTCAAGACAGAGTTAAAGAAAT 18 7814504 0.783370631 2 17 74 0.944444444 1.230448921 0 0 0 18 1 0 17 3L:7814478-7814526 7 Pdp1 FBtr0332080|FBtr0076782|FBtr0076780|FBtr0332082|FBtr0332081|FBtr0332083|FBtr0300499|FBtr0076775|FBtr0076777|FBtr0300500|FBtr0306535|FBtr0076776|FBtr0346536 7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7811456|7814335|7811913 7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325 GATCTCA 7mer-A1 dme-bantam-3p 3L - 7814486 7814520 3'utr Pdp1 FlyBase G26585.1 TAATGAAAACCATACATGGATCTCAAGACAGAGTT 17 7814505 0.73199212 3 17 64 1 1.380211242 0.083333333 0.352941176 0.541666667 17 0 0 24 3L:7814486-7814520 7 17.5 1978 FBgn0016694 2143.56 56.17 86.44 0.008163989 0.31155421 0.202452568 2 3 2.5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 3L 7814945 7814950 - 3L_7814945_7814950_- 0.640984261 0.707071785 0.674028023 0.046730919 Pdp1 FBtr0076775|FBtr0076777|FBtr0306535|FBtr0300500|FBtr0346536|FBtr0076776|FBtr0076782|FBtr0332082|FBtr0332081|FBtr0076780|FBtr0332083|FBtr0332080|FBtr0300499 7814335|7814335|7811456|7814335|7811913|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335 7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325 3L - 7814927 7814974 3'utr Pdp1 FlyBase G35133.2 TTTGTTATACATTTGAGTTACATTTACCTGCATACAATTATATAGAAA 148 7814952 0.730174722 9 142 1137 0.968085106 1.959041392 0.468085106 0.236486486 0.39893617 148 5 1 182 3L:7814927-7814974 6 Pdp1 FBtr0332080|FBtr0076782|FBtr0076780|FBtr0332082|FBtr0332081|FBtr0332083|FBtr0300499|FBtr0076775|FBtr0076777|FBtr0300500|FBtr0306535|FBtr0076776|FBtr0346536 7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7811456|7814335|7811913 7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 3L - 7814927 7814971 3'utr Pdp1 FlyBase G26587.1 GTTATACATTTGAGTTACATTTACCTGCATACAATTATATAGAAA 101 7814952 0.727914561 4 96 769 0.953947368 1.559308011 0.513157895 0.306930693 0.539473684 101 4 3 145 3L:7814927-7814971 6 123.5 1979 FBgn0016694 2143.56 56.17 86.44 0.057614436 2.198682571 1.428736696 2 2 2 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3L 7815088 7815094 - 3L_7815088_7815094_- 0.520274494 0.521179888 0.520727191 0.000640214 Pdp1 FBtr0076775|FBtr0076777|FBtr0306535|FBtr0300500|FBtr0346536|FBtr0076776|FBtr0076782|FBtr0332082|FBtr0332081|FBtr0076780|FBtr0332083|FBtr0332080|FBtr0300499 7814335|7814335|7811456|7814335|7811913|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335 7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325 3L - 7815066 7815117 3'utr Pdp1 FlyBase G35134.1 CAAGAAAAAACTATTTCTTTTGGTGTGATTTGCAAGATCTTAAACAAACAAT 18 7815088 0.912340412 7 17 176 0.96 1.380211242 0.28 0.222222222 0.44 18 1 0 24 3L:7815066-7815117 7 Pdp1 FBtr0332080|FBtr0076782|FBtr0076780|FBtr0332082|FBtr0332081|FBtr0332083|FBtr0300499|FBtr0076775|FBtr0076777|FBtr0300500|FBtr0306535|FBtr0076776|FBtr0346536 7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7811456|7814335|7811913 7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 7815069 7815114 3'utr Pdp1 FlyBase G26588.1 GAAAAAACTATTTCTTTTGGTGTGATTTGCAAGATCTTAAACAAAC 12 7815088 0.67966725 7 12 110 1 1.204119983 0.3125 0.333333333 0.5 12 0 0 16 3L:7815069-7815114 7 15 1980 FBgn0016694 2143.56 56.17 86.44 0.006997705 0.267046466 0.173530773 -6 -6 -6 0.2 dme-miR-1012-3p 6mer2-7 TGACTA 3L 7896355 7896360 - 3L_7896355_7896360_- 0.96555837 0.999806702 0.982682536 0.024217205 pbl FBtr0076771|FBtr0076774|FBtr0076773|FBtr0112817|FBtr0076772|FBtr0306647 7896107|7896107|7896107|7896107|7896107|7896107 7896723|7896723|7896723|7896723|7896723|7896723 3L - 7896340 7896379 3'utr pbl FlyBase G35157.1 AATCAACTACTCATTGCAGTGACTAGGGATCGAATTCACG 9 7896366 0.727135316 6 9 48 1 1.041392685 0.090909091 0.111111111 0.272727273 9 0 0 11 3L:7896340-7896379 6 pbl FBtr0076772|FBtr0306647|FBtr0076773|FBtr0112817|FBtr0076771|FBtr0076774 7896107|7896107|7896107|7896107|7896107|7896107 7896723|7896723|7896723|7896723|7896723|7896723 TGACTA 6mer2-7 dme-miR-1012-3p 3L - 7896335 7896478 3'utr pbl FlyBase G26602.1 AGCGTTTGCCCGAGCTGTCGATTGATCATGATTAACTTGTAAATAGTTCTCCATATGTGTACTCCCGTGCCCGTATAATTGTGTCGCGTCGCTAAATGTAATCAACTACTCATTGCAGTGACTAGGGATCGAATTCACGCACGC 31 7896366 0.977227081 13 31 210 1 1.681241237 0.25 0.451612903 0.645833333 31 0 0 48 3L:7896335-7896478 6 9 1981 FBgn0003041 731.33 22.66666667 34.57666667 0.012306346 0.397058824 0.26029114 6 6 6 0.2 dme-miR-277-3p 6mer2-7 GCATTT 3L 7913706 7913711 - 3L_7913706_7913711_- 0.632910883 0.879126474 0.756018679 0.17410072 CG8111 FBtr0076770 7913662 7913785 3L - 7913670 7913748 3'utr CG8111 FlyBase G35170.1 ATTTATTGTTGATTTTCATTGTTGAGCCAAATTGATCGCATTTGCCATTTATCCCTCGGCCAATAAAAACTTAACACTT 11 7913717 0.985535566 7 11 86 1 1.113943352 0.153846154 0.090909091 0.230769231 11 0 0 13 3L:7913670-7913748 6 CG8111 FBtr0076770 7913662 7913785 GCATTT 6mer2-7 dme-miR-277-3p 3L - 7913702 7913728 3'utr CG8111 FlyBase G26614.1 GTTGAGCCAAATTGATCGCATTTGCCA 7 7913716 0.937652003 3 6 38 0.916666667 1.041392685 0.666666667 0.428571429 0.666666667 7 1 0 11 3L:7913702-7913728 6 7 1982 FBgn0035825 99.28 9.136666667 13.99333333 0.070507655 0.766143743 0.500238209 6 5 5.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 7972314 7972319 + 3L_7972314_7972319_+ 0.999972251 0.998477099 0.999224675 0.001057266 RNaseX25 FBtr0076752|FBtr0076752|FBtr0076752 7971844|7971844|7971844 7972449|7972449|7972449 3L + 7972295 7972325 3'utr RNaseX25 FlyBase G28552.1 AAACTCATATATACTATTTCTGTGACGATTA 6 7972311 0.722315116 2 6 61 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 3L:7972295-7972325 6 RNaseX25 FBtr0076752|FBtr0076752|FBtr0076752 7971844|7971844|7971844 7972449|7972449|7972449 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 7972302 7972337 3'utr RNaseX25 FlyBase G21608.1 TATATACTATTTCTGTGACGATTACCTAATTGTTCT 5 7972323 0.855476523 2 4 46 0.833333333 0.698970004 0 0.2 0.333333333 5 1 0 5 3L:7972302-7972337 6 5.5 1983 FBgn0010406 524.1133333 38.16 57.97666667 0.010493914 0.144129979 0.094865751 3 -9 -3 0.2 dme-miR-304-5p 7mer-m8 TGAGATT 3L 7977838 7977844 - 3L_7977838_7977844_- 0.620059405 0.620006125 0.620032765 3.77E-05 CG8038 FBtr0076763 7977803 7977984 3L - 7977805 7977983 3'utr CG8038 FlyBase G35208.1 AACTACAGGACCAATCATTAGCCATAGAAATTGAATCCTATTGTAATTTAAGGAAAAAAGTTTATTGGAAAGTTAGCATCGCTTTTCAATAGAAATTTAATAATTGCCCTCAAAGATCCTCTAAAACTTTACTTGTATTTGAGATTGTTGTGTTTAATATATATATAAAACCGTACATT 34 7977845 0.988159393 21 32 302 0.909090909 1.124938737 0.159090909 0.205882353 0.386363636 34 2 2 40 3L:7977805-7977983 7 CG8038 FBtr0076763 7977803 7977984 TGAGATT 7mer-m8 dme-miR-304-5p 3L - 7977810 7977882 3'utr CG8038 FlyBase G26638.1 AATTGCCCTCAAAGATCCTCTAAAACTTTACTTGTATTTGAGATTGTTGTGTTTAATATATATATAAAACCGT 16 7977846 0.986385513 10 16 142 1 1.414973348 0.153846154 0.5 0.692307692 16 0 0 26 3L:7977810-7977882 7 11.5 1984 FBgn0035831 191 28.52666667 43.6 0.060209424 0.403131573 0.263761468 1 2 1.5 0.2 dme-miR-1008-3p 6mer2-7 GCTGTG 3L 8087780 8087785 - 3L_8087780_8087785_- 0.938764407 0.667207461 0.802985934 0.192019725 CG7565 FBtr0076738 8087633 8087997 3L - 8087650 8087804 3'utr CG7565 FlyBase G35223.1 TATATTATTTTAAGCTGCTGCTGTGCAACAAGTATTATATTTAATGTTTATTTCTACTGCGATACTTTTTATGTGTGTATATAGACATAGCTGTTCACAATCAATGTAACAAACGACATGTAACTGCTTAAAAGTGCATTATTACCCACATTAAA 75 8087787 0.990295055 26 72 728 0.964705882 1.913813852 0.141176471 0.12 0.223529412 75 3 0 82 3L:8087650-8087804 6 CG7565 FBtr0076738 8087633 8087997 GCTGTG 6mer2-7 dme-miR-1008-3p 3L - 8087676 8087803 3'utr CG7565 FlyBase G26650.1 ATATTATTTTAAGCTGCTGCTGTGCAACAAGTATTATATTTAATGTTTATTTCTACTGCGATACTTTTTATGTGTGTATATAGACATAGCTGTTCACAATCAATGTAACAAACGACATGTAACTGCTT 41 8087787 0.904267131 19 39 414 0.947368421 1.73239376 0.140350877 0.341463415 0.526315789 41 3 0 54 3L:8087676-8087803 6 27.5 1985 FBgn0035833 598.6666667 19.29666667 29.46666667 0.045935412 1.4251166 0.933257919 2 2 2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 8087922 8087928 - 3L_8087922_8087928_- 0.737676918 0.710862651 0.724269785 0.018960503 CG7565 FBtr0076738|FBtr0076738|FBtr0076738 8087633|8087633|8087633 8087997|8087997|8087997 3L - 8087806 8087967 3'utr CG7565 FlyBase G35224.1 AAATATGTGTGTGTGTTAGTCGATCTACTATACCGTGTGTGTGATATCTATTTGTATTTCTATAATGTACTCGGATCTTTTGTACTTTCCGCAAAACTCGTCTGAAGTCAAGTTGTCTATAAGTTCCTTTACGTGCAATTATTTTAAGTTAAGAGTCATTCT 110 8087930 0.808693797 30 105 1077 0.955882353 2.113943352 0.132352941 0.209090909 0.360294118 110 6 0 130 3L:8087806-8087967 7 CG7565 FBtr0076738|FBtr0076738|FBtr0076738 8087633|8087633|8087633 8087997|8087997|8087997 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 8087808 8087944 3'utr CG7565 FlyBase G26651.1 TCTACTATACCGTGTGTGTGATATCTATTTGTATTTCTATAATGTACTCGGATCTTTTGTACTTTCCGCAAAACTCGTCTGAAGTCAAGTTGTCTATAAGTTCCTTTACGTGCAATTATTTTAAGTTAAGAGTCATT 70 8087930 0.923504311 17 66 659 0.962962963 1.716003344 0.037037037 0.428571429 0.62962963 70 3 1 104 3L:8087808-8087944 7 52.5 1986 FBgn0035833 598.6666667 19.29666667 29.46666667 0.087694878 2.720677146 1.781674208 2 2 2 0.2 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3L 8105838 8105843 + 3L_8105838_8105843_+ 0.753173893 0.665899346 0.709536619 0.061712461 Ect4 FBtr0304994 8105751 8108836 3L + 8105740 8105878 stop_codon Ect4 FlyBase G28596.1 GGCTCCAGCGTAGAGTGAGCCAAGTTATGCTAACGATTTACAGAGCTAGCCAACTCGAATATGTTCTAGGCTTAAGCAGAGATCCTCAAGTCACACTCTCTAGTACAACTCTCTCTCACTTTCTACCCCCACCCATACA 85 8105840 0.984608114 19 70 557 0.833333333 1.057991947 0.0625 0.105882353 0.208333333 85 10 6 80 3L:8105740-8105878 6 Ect4 FBtr0304994 8105751 8108836 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 8105795 8105870 3'utr Ect4 FlyBase G21642.1 CGAATATGTTCTAGGCTTAAGCAGAGATCCTCAAGTCACACTCTCTAGTACAACTCTCTCTCACTTTCTACCCCCA 36 8105840 0.781684767 10 29 253 0.829787234 0.989004616 0.063829787 0.222222222 0.404255319 36 5 3 39 3L:8105795-8105870 6 40.5 1987 FBgn0262579 2855.543333 63.41666667 97.15666667 0.01418294 0.638633377 0.416852506 -2 -2 -2 0.2 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 8106012 8106018 + 3L_8106012_8106018_+ 0.818869792 0.817576153 0.818222973 0.000914713 Ect4 FBtr0304994 8105751 8108836 3L + 8105885 8106045 3'utr Ect4 FlyBase G28597.1 ACTTTCTCACTCAACTCAAGCAACCCATTACAACTACACTATCCATTACTCTTTACTCTTACCAATTAATAATTGATTTAATTCTGATTGCCACACACTCGAAATCGCTTGAAACGCCGTCTCATGCGCAGCTAATCACCAGGCAAATAGGTACCGCCAAT 55 8106009 0.913930648 15 52 347 0.951612903 1.469822016 0.080645161 0.109090909 0.209677419 55 2 1 59 3L:8105885-8106045 7 Ect4 FBtr0304994 8105751 8108836 GCAGCTA 7mer-A1 dme-miR-980-3p 3L + 8105885 8106039 3'utr Ect4 FlyBase G21643.1 ACTTTCTCACTCAACTCAAGCAACCCATTACAACTACACTATCCATTACTCTTTACTCTTACCAATTAATAATTGATTTAATTCTGATTGCCACACACTCGAAATCGCTTGAAACGCCGTCTCATGCGCAGCTAATCACCAGGCAAATAGGTACC 34 8106009 0.987127491 16 28 244 0.777777778 1.544068044 0.155555556 0.303030303 0.488888889 33 10 0 35 3L:8105885-8106039 7 15 1988 FBgn0262579 2855.543333 63.41666667 97.15666667 0.005252941 0.23653088 0.154389817 3 3 3 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 3L 8123643 8123648 - 3L_8123643_8123648_- 0.999932217 0.999991612 0.999961915 4.20E-05 CG7550 FBtr0076736 8123610 8123736 3L - 8123630 8123668 3'utr CG7550 FlyBase G35244.1 CGTATCAGCCAAGTATCTTCTGTGTTATTTAAATAAAAT 16 8123650 0.65486311 8 14 177 0.875 0.669006781 0.0625 0 0 16 0 2 14 3L:8123630-8123668 6 CG7550 FBtr0076736 8123610 8123736 TGTGTT 6mer3-8 dme-miR-317-3p 3L - 8123630 8123664 3'utr CG7550 FlyBase G26668.1 TCAGCCAAGTATCTTCTGTGTTATTTAAATAAAAT 9 8123650 0.613164019 6 8 89 0.714285714 1 0.285714286 0.333333333 0.571428571 9 4 0 10 3L:8123630-8123664 6 12.5 1989 FBgn0035839 38.33333333 5.32 8.246666667 0.326086957 2.34962406 1.515763945 2 2 2 0.2 dme-miR-92b-3p 7mer-m8 GTGCAAT 3L 8131118 8131124 + 3L_8131118_8131124_+ 0.658999972 0.658366232 0.658683102 0.000448164 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 3L + 8131095 8131133 3'utr CdsA FlyBase G28656.1 TTTATTTGGCAGAACTCTACACAGTGCAATCGTATTGTT 6 8131112 0.685221027 5 6 38 1 0.77815125 0 0 0 6 0 0 6 3L:8131095-8131133 7 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 GTGCAAT 7mer-m8 dme-miR-92b-3p 3L + 8131096 8131146 3'utr CdsA FlyBase G21697.1 TTATTTGGCAGAACTCTACACAGTGCAATCGTATTGTTAAGCGATTCCATT 8 8131128 0.623481819 7 8 59 1 1.113943352 0.230769231 0.5 0.692307692 8 0 0 13 3L:8131096-8131146 7 6 1990 FBgn0010350 708.1033333 35.43 53.93 0.00847334 0.16934801 0.111255331 6 -10 -2 0.2 dme-miR-33-5p 6mer3-8 CAATGC 3L 8131378 8131383 + 3L_8131378_8131383_+ 0.837530085 0.915183541 0.876356813 0.054909246 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 3L + 8131314 8131406 3'utr CdsA FlyBase G28659.1 AGCGCATTTTAGTTAAATACCTGAGGGACGAAATTATGAGATCAAGATACCAGGAAAACTCTTGCAATGCTGTAATTCTATATATAATAGTGC 56 8131381 0.776535826 11 52 343 0.944444444 1.832508913 0.166666667 0.25 0.416666667 56 4 0 68 3L:8131314-8131406 6 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 CAATGC 6mer3-8 dme-miR-33-5p 3L + 8131283 8131409 3'utr CdsA FlyBase G21699.1 AACGCCAGAATCTGGAGATTAGCATAATTAAAGCGCATTTTAGTTAAATACCTGAGGGACGAAATTATGAGATCAAGATACCAGGAAAACTCTTGCAATGCTGTAATTCTATATATAATAGTGCAAT 31 8131381 0.925496026 17 30 216 0.972222222 1.544068044 0.111111111 0.161290323 0.277777778 31 1 0 35 3L:8131283-8131409 6 18.5 1991 FBgn0010350 708.1033333 35.43 53.93 0.02612613 0.522156365 0.343037271 -3 -3 -3 0.2 dme-miR-305-5p 7mer-A1 GTACAAA 3L 8131626 8131632 + 3L_8131626_8131632_+ 0.782909867 0.753420828 0.768165348 0.020851943 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 3L + 8131577 8131652 3'utr CdsA FlyBase G28661.1 GGCATTTAAGAACGAAAATGCAATTCGTCGGCGTTTTAAAGAACTAAATGTACAAAGATTTCAATATTAAATCTTA 16 8131625 0.963480593 7 15 82 0.952380952 1.301029996 0.285714286 0.3125 0.476190476 16 1 0 20 3L:8131577-8131652 7 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 GTACAAA 7mer-A1 dme-miR-305-5p 3L + 8131587 8131640 3'utr CdsA FlyBase G21700.1 AACGAAAATGCAATTCGTCGGCGTTTTAAAGAACTAAATGTACAAAGATTTCAA 25 8131625 0.95399064 6 24 125 0.966666667 1.462397998 0.066666667 0.2 0.333333333 25 1 0 29 3L:8131587-8131640 7 17.5 1992 FBgn0010350 708.1033333 35.43 53.93 0.024713907 0.493931696 0.324494715 1 1 1 0.2 dme-miR-14-3p 6mer2-7 AGACTG 3L 8131653 8131658 - 3L_8131653_8131658_- 0.999999674 0.999999939 0.999999807 1.41E-07 CG7504 FBtr0273367|FBtr0273368 8131427|8131427 8131796|8131796 3L - 8131618 8131696 3'utr CG7504 FlyBase G35266.1 AAAAAAGGCTTTGTTATTTTTATATATATTTAACATAGAGACTGTAAGATTTAATATTGAAATCTTTGTACATTTAGTT 29 8131654 0.987865704 10 27 243 0.933333333 1.447158031 0.066666667 0.034482759 0.066666667 29 2 0 28 3L:8131618-8131696 6 CG7504 FBtr0273367|FBtr0273368 8131427|8131427 8131796|8131796 AGACTG 6mer2-7 dme-miR-14-3p 3L - 8131556 8131679 3'utr CG7504 FlyBase G26681.1 TTTTATATATATTTAACATAGAGACTGTAAGATTTAATATTGAAATCTTTGTACATTTAGTTCTTTAAAACGCCGACGAATTGCATTTTCGTTCTTAAATGCCGTACAGTATAACAGGATTTAT 31 8131654 0.98514446 10 27 227 0.888888889 1.602059991 0.111111111 0.290322581 0.511111111 31 5 0 40 3L:8131556-8131679 6 22.5 1993 FBgn0035842 670.3266667 14.32333333 21.90333333 0.033565724 1.570863393 1.027240907 -4 -4 -4 0.2 dme-miR-184-5p 6mer3-8 TGATAA 3L 8170708 8170713 - 3L_8170708_8170713_- 0.952948017 0.993385641 0.973166829 0.028593701 RecQ4 FBtr0076729 8170638 8170818 3L - 8170704 8170731 3'utr RecQ4 FlyBase G35284.1 ATTTTACTCGCACAAGTCTGATAATACA 8 8170709 0.710080714 3 8 39 1 1 0 0.25 0.4 8 0 0 10 3L:8170704-8170731 6 RecQ4 FBtr0076729 8170638 8170818 TGATAA 6mer3-8 dme-miR-184-5p 3L - 8170699 8170727 3'utr RecQ4 FlyBase G26690.1 TACTCGCACAAGTCTGATAATACAAAAAT 5 8170710 0.647048515 2 5 21 1 0.903089987 0 0.4 0.625 5 0 0 8 3L:8170699-8170727 6 6.5 1994 FBgn0040290 522 12.57 19.37666667 0.012452107 0.517104216 0.335455015 -4 -3 -3.5 0.2 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 8190590 8190595 + 3L_8190590_8190595_+ 0.509766864 0.99996033 0.754863597 0.346619077 Atg18a FBtr0321321|FBtr0076693|FBtr0321320|FBtr0076692|FBtr0076691|FBtr0321319|FBtr0346547 8189976|8189976|8190267|8189976|8189976|8190267|8189976 8190714|8191118|8190965|8190714|8190714|8190714|8190714 3L + 8190568 8190696 3'utr Atg18a FlyBase G28679.1 CGTTCCTGGCGCTGCCATTGGAATGTGAAATGCTTTTGTCATACACTCCTAAGTTAGTTGTTAATTAATAATTTAGACGGATTTACAGATTCGCTTTGATATTTGAGTTGCCAGCTTTTTATACAAAAT 57 8190604 0.83097122 21 56 525 1 1.806179974 0.21875 0.122807018 0.21875 57 0 0 64 3L:8190568-8190696 6 Atg18a FBtr0346547|FBtr0076691|FBtr0321319|FBtr0321320|FBtr0076692|FBtr0321321|FBtr0076693 8189976|8189976|8190267|8190267|8189976|8189976|8189976 8190714|8190714|8190714|8190965|8190714|8190714|8191118 ATGTGA 6mer3-8 dme-miR-1003-3p 3L + 8190558 8190633 3'utr Atg18a FlyBase G21716.1 TTTAAGCCTCCGTTCCTGGCGCTGCCATTGGAATGTGAAATGCTTTTGTCATACACTCCTAAGTTAGTTGTTAATT 35 8190603 0.935417665 10 35 287 1 1.748188027 0.232142857 0.428571429 0.642857143 35 0 0 56 3L:8190558-8190633 6 28 1995 FBgn0035850 441.6666667 25.08666667 38.37666667 0.063396226 1.116130747 0.729610006 -14 -13 -13.5 0.2 dme-miR-283-5p 8mer-m1 TGATATTT 3L 8190664 8190671 + 3L_8190664_8190671_+ 0.529728984 0.507314096 0.51852154 0.015849728 Atg18a FBtr0321321|FBtr0076693|FBtr0321320|FBtr0076692|FBtr0076691|FBtr0321319|FBtr0346547 8189976|8189976|8190267|8189976|8189976|8190267|8189976 8190714|8191118|8190965|8190714|8190714|8190714|8190714 3L + 8190568 8190696 3'utr Atg18a FlyBase G28679.1 CGTTCCTGGCGCTGCCATTGGAATGTGAAATGCTTTTGTCATACACTCCTAAGTTAGTTGTTAATTAATAATTTAGACGGATTTACAGATTCGCTTTGATATTTGAGTTGCCAGCTTTTTATACAAAAT 57 8190658 0.83097122 21 56 525 1 1.806179974 0.21875 0.122807018 0.21875 57 0 0 64 3L:8190568-8190696 8 Atg18a FBtr0346547|FBtr0076691|FBtr0321319|FBtr0321320|FBtr0076692|FBtr0321321|FBtr0076693 8189976|8189976|8190267|8190267|8189976|8189976|8189976 8190714|8190714|8190714|8190965|8190714|8190714|8191118 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 8190634 8190674 3'utr Atg18a FlyBase G21717.1 AATAATTTAGACGGATTTACAGATTCGCTTTGATATTTGAG 24 8190657 0.982836463 5 24 195 1 1.612783857 0.097560976 0.5 0.707317073 24 0 0 41 3L:8190634-8190674 8 23.5 1996 FBgn0035850 441.6666667 25.08666667 38.37666667 0.053207547 0.936752591 0.612351255 6 7 6.5 0.2 dme-miR-968-5p 6mer2-7 CTACTT 3L 8191053 8191058 + 3L_8191053_8191058_+ 0.585395503 0.567320287 0.576357895 0.012781096 Atg18a FBtr0076693 8189976 8191118 3L + 8191030 8191076 3'utr Atg18a FlyBase G28680.1 AGTTTACAAATGAAACTCATACGCTACTTTATTGTATTCAATAAATT 21 8191058 0.728716113 6 21 185 1 1.397940009 0 0.19047619 0.32 21 0 0 25 3L:8191030-8191076 6 Atg18a FBtr0076693 8189976 8191118 CTACTT 6mer2-7 dme-miR-968-5p 3L + 8191030 8191070 3'utr Atg18a FlyBase G21718.1 AGTTTACAAATGAAACTCATACGCTACTTTATTGTATTCAA 15 8191058 0.648308209 5 15 112 1 1.397940009 0.04 0.333333333 0.6 15 0 0 25 3L:8191030-8191070 6 17 1997 FBgn0035850 441.6666667 25.08666667 38.37666667 0.038490566 0.677650811 0.442977504 -5 -5 -5 0.2 dme-miR-34-5p 6mer3-8 CACTGC 3L 8196599 8196604 - 3L_8196599_8196604_- 0.93199789 0.986999943 0.959498916 0.038892287 UbcE2M FBtr0332139|FBtr0076722|FBtr0332138 8195845|8196531|8196531 8196739|8196739|8196739 3L - 8196580 8196648 3'utr UbcE2M FlyBase G35302.1 AACATCGGCGACAACAAATTATTGTAATAAACGAAAACAAAATCCACTGCGTGCAAAGAAGAAGCCGAG 9 8196601 0.820733226 3 9 20 1 1.079181246 0 0.222222222 0.416666667 9 0 0 12 3L:8196580-8196648 6 UbcE2M FBtr0332138|FBtr0332139|FBtr0076722 8196531|8195845|8196531 8196739|8196739|8196739 CACTGC 6mer3-8 dme-miR-34-5p 3L - 8196588 8196630 3'utr UbcE2M FlyBase G26709.1 TTATTGTAATAAACGAAAACAAAATCCACTGCGTGCAAAGAAG 10 8196601 0.768665859 3 9 32 0.9375 1.176091259 0 0.4 0.625 10 1 0 15 3L:8196588-8196630 6 7.5 1998 FBgn0035853 344.1466667 39.61666667 60.33 0.021793034 0.189314262 0.124316261 -3 -3 -3 0.2 dme-miR-34-5p 6mer2-7 ACTGCC 3L 826829 826834 - 3L_826829_826834_- 0.995949162 0.99676178 0.996355471 0.000574595 CG13900 FBtr0331404|FBtr0072597 826718|826718 830720|827877 3L - 826717 826874 3'utr CG13900 FlyBase G33124.1 ATACTAACTGCACATTAAATCACCGATCAACCACTAATCGACTGCCGCATATTTAAACTAGCATATAAGTCAGTGCAAACTCGACAAATTGCACAACCTAAATATAAACCCCTAATCATAAGCAATTTTTAACTTAAATAAAAGTAACTGAAAACAAA 753 826837 0.772646782 25 721 3085 0.959954233 1.923761961 0.177345538 0.139442231 0.258581236 753 26 9 839 3L:826717-826874 6 CG13900 FBtr0072597|FBtr0331404 826718|826718 827877|830720 ACTGCC 6mer2-7 dme-miR-34-5p 3L - 826751 826872 3'utr CG13900 FlyBase G25063.1 ACTAACTGCACATTAAATCACCGATCAACCACTAATCGACTGCCGCATATTTAAACTAGCATATAAGTCAGTGCAAACTCGACAAATTGCACAACCTAAATATAAACCCCTAATCATAAGCA 388 826838 0.947575908 17 359 1522 0.928455285 1.853546121 0.22601626 0.412371134 0.629268293 388 37 7 571 3L:826751-826872 6 515 1999 FBgn0035162 4015.156667 113.57 173.3966667 0.128263986 4.534648235 2.970068629 3 4 3.5 0.2 dme-miR-307a-3p 6mer2-7 GTTGTG 3L 826976 826981 - 3L_826976_826981_- 0.999982634 0.99520409 0.997593362 0.00337891 CG13900 FBtr0331404|FBtr0072597 826718|826718 830720|827877 3L - 826950 827003 intron-3'utr CG13900 FlyBase G33125.1 AGATCTTCTTACGTTGGGGTATGTTGTGGCGCTTAATTCTAACTAAATTATACA 12 826979 0.988546395 7 12 114 1 1.113943352 0.230769231 0.083333333 0.153846154 12 0 0 13 3L:826950-827003 6 CG13900 FBtr0072597|FBtr0331404 826718|826718 827877|830720 GTTGTG 6mer2-7 dme-miR-307a-3p 3L - 826954 827003 intron-3'utr CG13900 FlyBase G25064.1 AGATCTTCTTACGTTGGGGTATGTTGTGGCGCTTAATTCTAACTAAATTA 11 826978 0.982079479 7 11 89 1 1.176091259 0.333333333 0.272727273 0.466666667 11 0 0 15 3L:826954-827003 6 11.5 2000 FBgn0035162 4015.156667 113.57 173.3966667 0.002864147 0.101259135 0.066321921 -2 -3 -2.5 0.2 dme-miR-33-5p 7mer-A1 AATGCAA 3L 8282717 8282723 - 3L_8282717_8282723_- 0.745339157 0.782911797 0.764125477 0.02656784 cert FBtr0345035|FBtr0332136|FBtr0076717 8282526|8282526|8282526 8283085|8283085|8283085 3L - 8282654 8282798 3'utr cert FlyBase G35311.1 TGAAACACAATCATTGTATAGATCTTAGTTCCAAAACTTTCTATCTGTAGTGTATATCTTTATGGAAATGCTTTAAATGCAACAATTGCAAGAATGATGTGAGGGATGCATAGCTACATATACGAAAGCTTTTCTTTTGGTGTGA 29 8282730 0.980490007 12 29 211 1 1.531478917 0.117647059 0.172413793 0.294117647 29 0 0 34 3L:8282654-8282798 7 cert FBtr0345035|FBtr0332136|FBtr0076717 8282526|8282526|8282526 8283085|8283085|8283085 AATGCAA 7mer-A1 dme-miR-33-5p 3L - 8282703 8282750 3'utr cert FlyBase G26720.1 AGTGTATATCTTTATGGAAATGCTTTAAATGCAACAATTGCAAGAATG 7 8282722 0.991769521 4 5 56 0.888888889 0.903089987 0.111111111 0.285714286 0.444444444 7 1 0 8 3L:8282703-8282750 7 10 2001 FBgn0027569 860.3466667 42.59 65.35666667 0.011623222 0.234796901 0.153006579 7 -1 3 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 8298258 8298263 + 3L_8298258_8298263_+ 0.9974777 0.996619216 0.997048458 0.000607051 Rab19 FBtr0076705|FBtr0076705|FBtr0076705|FBtr0331832|FBtr0331832|FBtr0331832 8298223|8298223|8298223|8298223|8298223|8298223 8298506|8298506|8298506|8298506|8298506|8298506 3L + 8298192 8298309 stop_codon Rab19 FlyBase G28696.1 AAGAGTTGCAGCAGCTCATGCAATCTCACCTAGACCTAAATCCGCTCTTTAGTTTGCTTTTACTTTTGTGATCAAATTGTTCTTGTGGCTATATATTAGTATTCTAATGCTTTAACCT 91 8298256 0.960949404 17 82 1009 0.901960784 1.361727836 0.156862745 0.10989011 0.205882353 91 7 3 92 3L:8298192-8298309 6 Rab19 FBtr0331832|FBtr0331832|FBtr0331832|FBtr0076705|FBtr0076705|FBtr0076705 8298223|8298223|8298223|8298223|8298223|8298223 8298506|8298506|8298506|8298506|8298506|8298506 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 8298234 8298301 3'utr Rab19 FlyBase G21730.1 CGCTCTTTAGTTTGCTTTTACTTTTGTGATCAAATTGTTCTTGTGGCTATATATTAGTATTCTAATGC 69 8298256 0.714657309 12 68 762 0.989795918 1.685741739 0.183673469 0.31884058 0.520408163 69 0 1 97 3L:8298234-8298301 6 63.5 2002 FBgn0015793 126.0033333 15.34 23.52333333 0.503954922 4.139504563 2.699447357 2 2 2 0.2 dme-miR-13b-2-5p 8mer-A1 TTTGACGA 3L 8298349 8298356 + 3L_8298349_8298356_+ 0.598430074 0.601172387 0.599801231 0.001939099 Rab19 FBtr0076705|FBtr0331832 8298223|8298223 8298506|8298506 3L + 8298342 8298375 3'utr Rab19 FlyBase G28697.1 ATTTATTTTTGACGATAGAGTACAAACAATCTCA 5 8298356 0.777445187 3 5 28 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 3L:8298342-8298375 8 Rab19 FBtr0331832|FBtr0076705 8298223|8298223 8298506|8298506 TTTGACGA 8mer-A1 dme-miR-13b-2-5p 3L + 8298315 8298379 3'utr Rab19 FlyBase G21731.1 TAGACACTAACTTTTACACAACCATGTATTTATTTTTGACGATAGAGTACAAACAATCTCACACA 7 8298351 0.98568958 6 6 56 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 3L:8298315-8298379 8 5 2003 FBgn0015793 126.0033333 15.34 23.52333333 0.03968149 0.325945241 0.21255491 -7 -2 -4.5 0.2 dme-miR-283-5p 8mer-m1 TGATATTT 3L 8302254 8302261 + 3L_8302254_8302261_+ 0.555391663 0.555589757 0.55549071 0.000140078 CG13671 FBtr0076706 8302211 8302341 3L + 8302238 8302288 3'utr CG13671 FlyBase G28703.1 AGTTAAAAGTTACCGTTGATATTTCCTGTAGATCGTAAGGCTAAAGTTGTC 28 8302254 0.751566411 7 26 251 0.914285714 1.505149978 0.314285714 0.25 0.4 28 3 0 32 3L:8302238-8302288 8 CG13671 FBtr0076706 8302211 8302341 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 8302238 8302286 3'utr CG13671 FlyBase G21734.1 AGTTAAAAGTTACCGTTGATATTTCCTGTAGATCGTAAGGCTAAAGTTG 16 8302258 0.669530582 7 12 124 0.75862069 1.041392685 0.137931034 0.6875 0.827586207 16 6 1 22 3L:8302238-8302286 8 17.5 2004 FBgn0035867 449.54 23.89 36.41666667 0.038928683 0.732524069 0.480549199 0 -4 -2 0.2 dme-bantam-3p 6mer2-7 GATCTC 3L 836596 836601 + 3L_836596_836601_+ 0.580135624 0.564219585 0.572177605 0.011254312 CG42554 FBtr0301253 836552 836770 3L + 836579 836651 3'utr CG42554 FlyBase G26909.1 CTTCAACTAATTTGAAAGATCTCGTGGTAATGCAGTGCCCGCTGAGTGGTGATTAGGATTTAATTTTAGGCAC 45 836603 0.639228599 14 41 322 0.890909091 0.991226076 0.254545455 0.222222222 0.363636364 45 2 4 49 3L:836579-836651 6 CG42554 FBtr0301253 836552 836770 GATCTC 6mer2-7 dme-bantam-3p 3L + 836572 836644 3'utr CG42554 FlyBase G20367.1 TGTAAAACTTCAACTAATTTGAAAGATCTCGTGGTAATGCAGTGCCCGCTGAGTGGTGATTAGGATTTAATTT 34 836603 0.856427737 13 33 242 0.980392157 1.698970004 0.156862745 0.382352941 0.588235294 34 1 0 50 3L:836572-836644 6 27 2005 FBgn0260756 37.16 4.52 6.893333333 0.726587729 5.973451327 3.916827853 -7 -7 -7 0.2 dme-miR-14-3p 6mer3-8 AAGACT 3L 839469 839474 + 3L_839469_839474_+ 0.415169577 0.35199096 0.383580268 0.044674016 CG13887 FBtr0304797|FBtr0072584|FBtr0345588|FBtr0072583 839152|839431|839431|839431 839747|839747|839931|839747 3L + 839446 839513 3'utr CG13887 FlyBase G26916.1 AAGTCCAACATTTAAATAACGATAAGACTTATAAGCATGGCGGTGGGGCAGCGAAAGCAGGCACATTT 389 839482 0.809432961 8 330 1595 0.844444444 2.102662342 0.433333333 0.143958869 0.26 389 68 2 380 3L:839446-839513 6 CG13887 FBtr0072583|FBtr0345588|FBtr0072584|FBtr0304797 839431|839431|839431|839152 839747|839931|839747|839747 AAGACT 6mer3-8 dme-miR-14-3p 3L + 839369 839515 stop_codon CG13887 FlyBase G20372.1 CGAGGAGTACAGCAAGCTGCAGAAGAAGATAACCATCGGCGGAGGCGGAAACAAGGATGATTAAACTCACTGGAGCCAAGTCCAACATTTAAATAACGATAAGACTTATAAGCATGGCGGTGGGGCAGCGAAAGCAGGCACATTTAA 320 839482 0.965389827 15 235 1239 0.738947368 2.068185862 0.412631579 0.35625 0.566315789 320 122 2 351 3L:839369-839515 6 267 2006 FBgn0035165 3558.06 375.0733333 574.87 0.075040893 0.711860792 0.464452833 -13 -13 -13 0.2 dme-bantam-3p 7mer-m8 TGATCTC 3L 840010 840016 - 3L_840010_840016_- 0.661086071 0.661327361 0.661206716 0.000170625 CG13902 FBtr0331402|FBtr0300712 839978|839978 840057|840057 3L - 839995 840028 3'utr CG13902 FlyBase G33156.1 ATTTATGTAGGATGATCTCTGTTCAAGTTAAGAT 13 840016 0.746872939 3 13 104 1 1.176091259 0.066666667 0.153846154 0.266666667 13 0 0 15 3L:839995-840028 7 CG13902 FBtr0300712|FBtr0331402 839978|839978 840057|840057 TGATCTC 7mer-m8 dme-bantam-3p 3L - 839990 840024 3'utr CG13902 FlyBase G25084.1 ATGTAGGATGATCTCTGTTCAAGTTAAGATTAAAG 6 840016 0.981906274 3 6 41 1 1 0 0.333333333 0.6 6 0 0 10 3L:839990-840024 7 9 2007 FBgn0035166 125.3433333 11.64666667 17.69 0.071802782 0.772753291 0.508762012 0 0 0 0.2 dme-miR-184-3p 8mer-A1 TCCGTCCA 3L 8407329 8407336 - 3L_8407329_8407336_- 0.631002123 0.631020704 0.631011413 1.32E-05 Oseg1 FBtr0345038|FBtr0076663 8407266|8407266 8407370|8407370 3L - 8407307 8407360 3'utr Oseg1 FlyBase G35375.1 AGAAGTGTGTGCAAATATATAATTTCCGTCCAAAACTGTACAAATAGGAACTAT 123 8407337 0.721228656 3 123 872 1 2.167317335 0.040816327 0.146341463 0.285714286 123 0 0 147 3L:8407307-8407360 8 Oseg1 FBtr0076663|FBtr0345038 8407266|8407266 8407370|8407370 TCCGTCCA 8mer-A1 dme-miR-184-3p 3L - 8407305 8407358 3'utr Oseg1 FlyBase G26767.1 AAGTGTGTGCAAATATATAATTTCCGTCCAAAACTGTACAAATAGGAACTATAC 99 8407337 0.701736893 5 96 665 0.964788732 2.136720567 0.070422535 0.333333333 0.535211268 99 5 0 137 3L:8407305-8407358 8 111 2008 FBgn0265102 118.8066667 3.826666667 5.82 0.934291005 29.00696864 19.07216495 1 1 1 0.2 dme-miR-970-3p 8mer-A1 TCTTATGA 3L 8427483 8427490 + 3L_8427483_8427490_+ 0.630097979 0.630320795 0.630209387 0.000157543 Cbl FBtr0076614 8427408 8428655 3L + 8427401 8427581 lincRNA_exon-lincRNA_intron Cbl FlyBase G28745.1 GAGGTATAGTTTTGTTCACAGCCTGATCAGCCTGATCCGCCTGCTCCGCTGCCGCCTGTGCTGCTATTTATATACATATTACTCTTATGATTACCTTTGGTTCGTTTATACAGTTATATATGCCTATATATACATTATATATTTTAGATTTTACAACTGCTATTGTTTATATAAGTTTAAT 61 8427491 0.987756108 26 59 536 0.971014493 1.348953548 0.15942029 0.098360656 0.202898551 61 0 2 67 3L:8427401-8427581 8 Cbl FBtr0076614 8427408 8428655 TCTTATGA 8mer-A1 dme-miR-970-3p 3L + 8427406 8427504 stop_codon Cbl FlyBase G21771.1 ATAGTTTTGTTCACAGCCTGATCAGCCTGATCCGCCTGCTCCGCTGCCGCCTGTGCTGCTATTTATATACATATTACTCTTATGATTACCTTTGGTTCG 35 8427497 0.989904453 16 31 305 0.884615385 1.185636577 0.096153846 0.342857143 0.557692308 35 4 2 46 3L:8427406-8427504 8 21.5 2009 FBgn0020224 1487.473333 60.45 92.97666667 0.014454041 0.35566584 0.231240813 -8 -14 -11 0.2 dme-miR-1006-3p 7mer-A1 GAATTTA 3L 8427989 8427995 + 3L_8427989_8427995_+ 0.698330797 0.692927549 0.695629173 0.00382071 Cbl FBtr0076614 8427408 8428655 3L + 8427971 8428044 3'utr Cbl FlyBase G28747.1 TTGTACATAGGCACTATGGAATTTATAATTGTAACCTGTTCTGTATTATTCGTTGAATTTTCTCTTTCACATCC 9 8427987 0.984746636 5 7 76 0.888888889 0.903089987 0.222222222 0 0 9 1 0 8 3L:8427971-8428044 7 Cbl FBtr0076614 8427408 8428655 GAATTTA 7mer-A1 dme-miR-1006-3p 3L + 8427976 8428023 3'utr Cbl FlyBase G21772.1 CATAGGCACTATGGAATTTATAATTGTAACCTGTTCTGTATTATTCGT 7 8427987 0.87987295 4 7 67 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 3L:8427976-8428023 7 4 2010 FBgn0020224 1487.473333 60.45 92.97666667 0.002689124 0.066170389 0.043021547 2 2 2 0.2 dme-miR-14-3p 7mer-m8 AAGACTG 3L 8428258 8428264 + 3L_8428258_8428264_+ 0.671791218 0.671795201 0.671793209 2.83E-06 Cbl FBtr0076614 8427408 8428655 3L + 8428231 8428285 3'utr Cbl FlyBase G28749.1 ATTTGTAAGCAGCCAACGCGCTGCCCTAAGACTGTAATTTATTATTAACAAAAAA 68 8428257 0.800300049 9 55 480 0.805194805 0.83814918 0 0.132352941 0.233766234 68 7 8 62 3L:8428231-8428285 7 Cbl FBtr0076614 8427408 8428655 AAGACTG 7mer-m8 dme-miR-14-3p 3L + 8428234 8428287 3'utr Cbl FlyBase G21774.1 TGTAAGCAGCCAACGCGCTGCCCTAAGACTGTAATTTATTATTAACAAAAAAAA 48 8428257 0.76662485 10 40 309 0.824324324 1.183269844 0 0.333333333 0.567567568 48 10 3 61 3L:8428234-8428287 7 56 2011 FBgn0020224 1487.473333 60.45 92.97666667 0.037647734 0.926385443 0.602301653 1 1 1 0.2 dme-bantam-3p 6mer3-8 TGATCT 3L 8433535 8433540 - 3L_8433535_8433540_- 0.998846733 0.998810975 0.998828854 2.52E-05 Unr FBtr0345595|FBtr0308954|FBtr0332984|FBtr0114592 8432320|8432320|8433230|8433230 8434468|8434468|8434468|8434468 3L - 8433517 8433554 3'utr Unr FlyBase G35387.1 TATTTCCCATGATTTGATCTTCGCTTGTATAAACACGT 30 8433540 0.688667363 6 26 290 0.897435897 1.243038049 0.128205128 0.2 0.384615385 30 3 1 35 3L:8433517-8433554 6 Unr FBtr0114592|FBtr0308954|FBtr0332984|FBtr0345595 8433230|8432320|8433230|8432320 8434468|8434468|8434468|8434468 TGATCT 6mer3-8 dme-bantam-3p 3L - 8433505 8433556 3'utr Unr FlyBase G26776.1 ATTATTTCCCATGATTTGATCTTCGCTTGTATAAACACGTCAAGTGGTTTTG 20 8433541 0.783196371 11 20 206 1 1.491361694 0.096774194 0.4 0.612903226 20 0 0 31 3L:8433505-8433556 6 23 2012 FBgn0263352 12905.48667 184.7766667 285.27 0.001782188 0.124474591 0.080625372 0 1 0.5 0.2 dme-bantam-3p 6mer3-8 TGATCT 3L 8433800 8433805 - 3L_8433800_8433805_- 0.889907642 0.999896631 0.944902137 0.077773968 Unr FBtr0345595|FBtr0308954|FBtr0332984|FBtr0114592 8432320|8432320|8433230|8433230 8434468|8434468|8434468|8434468 3L - 8433791 8433846 3'utr Unr FlyBase G35389.1 ATTTATCTATGGCTGGCATAGTTCCTGCTTCTATTGTATCTTGATCTACTCGTATT 8 8433827 0.74579482 7 7 91 0.9 0.653212514 0.3 0.25 0.4 8 0 1 9 3L:8433791-8433846 6 Unr FBtr0114592|FBtr0308954|FBtr0332984|FBtr0345595 8433230|8432320|8433230|8432320 8434468|8434468|8434468|8434468 TGATCT 6mer3-8 dme-bantam-3p 3L - 8433791 8433834 3'utr Unr FlyBase G26779.1 CTGGCATAGTTCCTGCTTCTATTGTATCTTGATCTACTCGTATT 7 8433806 0.913247696 3 4 70 0.75 0.77815125 0.25 0.142857143 0.25 7 2 0 6 3L:8433791-8433834 6 5 2013 FBgn0263352 12905.48667 184.7766667 285.27 0.000387432 0.027059694 0.017527255 22 1 11.5 0.2 dme-miR-184-5p 6mer2-7 GATAAG 3L 8433968 8433973 - 3L_8433968_8433973_- 0.987928248 0.926253291 0.957090769 0.04361074 Unr FBtr0345595|FBtr0308954|FBtr0332984|FBtr0114592 8432320|8432320|8433230|8433230 8434468|8434468|8434468|8434468 3L - 8433956 8433985 3'utr Unr FlyBase G35391.1 AAAACCGATTGGGATAAGTGATGAGAGCAA 8 8433977 0.851583007 2 4 29 0.666666667 0.77815125 0.111111111 0.125 0.222222222 8 3 0 6 3L:8433956-8433985 6 Unr FBtr0114592|FBtr0308954|FBtr0332984|FBtr0345595 8433230|8432320|8433230|8432320 8434468|8434468|8434468|8434468 GATAAG 6mer2-7 dme-miR-184-5p 3L - 8433944 8433990 3'utr Unr FlyBase G26781.1 AATTAAAAACCGATTGGGATAAGTGATGAGAGCAAGGAAACGAGCAA 12 8433977 0.95559408 3 10 42 0.833333333 0.875061263 0 0.5 0.666666667 12 2 1 15 3L:8433944-8433990 6 9.5 2014 FBgn0263352 12905.48667 184.7766667 285.27 0.000736121 0.051413418 0.033301784 4 4 4 0.2 dme-miR-317-3p 8mer-A1 TGTGTTCA 3L 8470858 8470865 + 3L_8470858_8470865_+ 0.610403298 0.625461401 0.617932349 0.010647685 Gug FBtr0305699|FBtr0076618|FBtr0305696|FBtr0305697|FBtr0305698|FBtr0076616|FBtr0333048|FBtr0076619 8470769|8470769|8470769|8470769|8470769|8470769|8470769|8470769 8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669 3L + 8470756 8470887 stop_codon Gug FlyBase G28769.1 CAACGGCCCAGATAAGTGGACAGACAGCAATTGTAGAGAGCAAGCAACTGAACAAAGACAATACTCGGGCCGCGGCCGTGAGGAACTGCTTTGTGTGATTTTTGTGTTCAAGCGTTTACATTTTGTTTTCCA 92 8470857 0.974565337 18 86 533 0.930434783 2.029383778 0.32173913 0.195652174 0.356521739 92 8 0 107 3L:8470756-8470887 8 Gug FBtr0076619|FBtr0076616|FBtr0333048|FBtr0305697|FBtr0305698|FBtr0305699|FBtr0076618|FBtr0305696 8470769|8470769|8470769|8470769|8470769|8470769|8470769|8470769 8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669 TGTGTTCA 8mer-A1 dme-miR-317-3p 3L + 8470784 8470875 3'utr Gug FlyBase G21793.1 AATTGTAGAGAGCAAGCAACTGAACAAAGACAATACTCGGGCCGCGGCCGTGAGGAACTGCTTTGTGTGATTTTTGTGTTCAAGCGTTTACA 45 8470857 0.962856331 9 40 254 0.873239437 1.792391689 0.169014085 0.444444444 0.647887324 45 9 0 62 3L:8470784-8470875 8 28 2015 FBgn0010825 1916.706667 26.53 40.64 0.014608391 1.055408971 0.688976378 1 1 1 0.2 dme-miR-305-5p 7mer-A1 GTACAAA 3L 8471665 8471671 + 3L_8471665_8471671_+ 0.576666948 0.585903396 0.581285172 0.006531192 Gug FBtr0305699|FBtr0076618|FBtr0305696|FBtr0305697|FBtr0305698|FBtr0076616|FBtr0333048|FBtr0333049|FBtr0076619 8470769|8470769|8470769|8470769|8470769|8470769|8470769|8471166|8470769 8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669 3L + 8471642 8471690 3'utr Gug FlyBase G28772.1 TCATATATATATTCGAGAGTATTGTACAAATGGATTCGGAGATAGTTTT 48 8471663 0.720444816 8 45 337 0.943396226 1.698970004 0.301886792 0.083333333 0.169811321 48 3 0 50 3L:8471642-8471690 7 Gug FBtr0333049|FBtr0076619|FBtr0076616|FBtr0333048|FBtr0305697|FBtr0305698|FBtr0305699|FBtr0076618|FBtr0305696 8471166|8470769|8470769|8470769|8470769|8470769|8470769|8470769|8470769 8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669 GTACAAA 7mer-A1 dme-miR-305-5p 3L + 8471644 8471691 3'utr Gug FlyBase G21796.1 ATATATATATTCGAGAGTATTGTACAAATGGATTCGGAGATAGTTTTC 31 8471663 0.693939081 6 30 191 0.97826087 1.653212514 0.239130435 0.387096774 0.586956522 31 1 0 45 3L:8471644-8471691 7 38.5 2016 FBgn0010825 1916.706667 26.53 40.64 0.020086537 1.451187335 0.94734252 2 2 2 0.2 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 8472551 8472557 + 3L_8472551_8472557_+ 0.631443221 0.682291639 0.65686743 0.035955248 Gug FBtr0305699|FBtr0076618|FBtr0305696|FBtr0305697|FBtr0305698|FBtr0076616|FBtr0333048|FBtr0333049|FBtr0076619 8470769|8470769|8470769|8470769|8470769|8470769|8470769|8471166|8470769 8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669 3L + 8472514 8472603 3'utr Gug FlyBase G28780.1 ATACAAAAAAAAACAAAACAAATGCAGCTATATTATTGCAGCTATATTACTAAATAAATTATAAAACAAAAAGATCATACTGAAAAGATA 154 8472549 0.983698849 13 143 1111 0.935483871 2.240549248 0.02688172 0.142857143 0.290322581 154 12 0 174 3L:8472514-8472603 7 Gug FBtr0333049|FBtr0076619|FBtr0076616|FBtr0333048|FBtr0305697|FBtr0305698|FBtr0305699|FBtr0076618|FBtr0305696 8471166|8470769|8470769|8470769|8470769|8470769|8470769|8470769|8470769 8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669 GCAGCTA 7mer-A1 dme-miR-980-3p 3L + 8472502 8472606 3'utr Gug FlyBase G21800.1 ATTTATATATATATACAAAAAAAAACAAAACAAATGCAGCTATATTATTGCAGCTATATTACTAAATAAATTATAAAACAAAAAGATCATACTGAAAAGATAAAT 98 8472549 0.981530708 10 93 680 0.960264901 1.860338007 0.046357616 0.387755102 0.602649007 98 5 1 145 3L:8472502-8472606 7 76 2017 FBgn0010825 1916.706667 26.53 40.64 0.039651346 2.864681493 1.87007874 2 2 2 0.2 dme-bantam-3p 6mer3-8 TGATCT 3L 8533492 8533497 + 3L_8533492_8533497_+ 0.495902002 0.663814976 0.579858489 0.118732421 foi FBtr0331417|FBtr0345601|FBtr0331418|FBtr0076624 8533104|8533104|8533104|8533104 8533984|8534503|8533984|8533984 3L + 8533470 8533636 3'utr foi FlyBase G28803.1 TGAAATTGGCTAGGTTATAAAGTGATCTTGAATTTAGATGAAAACATTTGAAAAGCATGCCGTGATGCTGTCAAATGAGAAAAGGAAGTAACAAAAAATGGATTGGATCTGGATCCCACAATCCTCTAATTACTGATCTTATACACGAAAGAGAACCTAAAAATTAC 122 8533496 0.978077291 20 120 989 0.972222222 2.146128036 0.25 0.147540984 0.277777778 122 4 0 140 3L:8533470-8533636 6 foi FBtr0331418|FBtr0076624|FBtr0331417|FBtr0345601 8533104|8533104|8533104|8533104 8533984|8533984|8533984|8534503 TGATCT 6mer3-8 dme-bantam-3p 3L + 8533422 8533545 3'utr foi FlyBase G21817.1 TGAACTGCGTTCGAATCCATTTCACACCCAATTTAATGTAAGATGTCTTGAAATTGGCTAGGTTATAAAGTGATCTTGAATTTAGATGAAAACATTTGAAAAGCATGCCGTGATGCTGTCAAAT 75 8533494 0.987547831 15 71 641 0.939655172 2.037426498 0.172413793 0.413333333 0.620689655 75 7 0 109 3L:8533422-8533545 6 74 2018 FBgn0024236 2703.683333 97.23 149.9066667 0.027370069 0.761081971 0.493640487 -4 -2 -3 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 8533795 8533802 + 3L_8533795_8533802_+ 0.500120288 0.474234114 0.487177201 0.018304308 foi FBtr0331417|FBtr0345601|FBtr0331418|FBtr0076624 8533104|8533104|8533104|8533104 8533984|8534503|8533984|8533984 3L + 8533768 8533847 3'utr foi FlyBase G28805.1 TGTCCACCGCTGTTATGATTTTCTACAGTACTTAACGACTTGAACGCATATTTCCTCTTTCGGGAAATGTACACAAAACC 18 8533799 0.978441286 9 15 107 0.869565217 1.301029996 0.347826087 0.277777778 0.434782609 18 3 0 20 3L:8533768-8533847 8 foi FBtr0331418|FBtr0076624|FBtr0331417|FBtr0345601 8533104|8533104|8533104|8533104 8533984|8533984|8533984|8534503 GTACTTAA 8mer-A1 dme-miR-252-5p 3L + 8533772 8533836 3'utr foi FlyBase G21820.1 CACCGCTGTTATGATTTTCTACAGTACTTAACGACTTGAACGCATATTTCCTCTTTCGGGAAATG 15 8533799 0.975530423 6 15 96 1 1.342422681 0.272727273 0.333333333 0.545454545 15 0 0 22 3L:8533772-8533836 8 12.5 2019 FBgn0024236 2703.683333 97.23 149.9066667 0.004623323 0.128561144 0.083385217 -4 -4 -4 0.2 dme-miR-14-3p 6mer3-8 AAGACT 3L 8537247 8537252 + 3L_8537247_8537252_+ 0.977716631 0.95748935 0.967602991 0.01430279 ergic53 FBtr0301629|FBtr0076626 8537117|8537117 8537581|8538013 3L + 8537194 8537274 3'utr ergic53 FlyBase G28812.1 AGATTCGCACACCTGACTAGGCAGCAACTAAATTTAGTTAAAATGAAAGATTTAAGACTTCAGCGTAGCATGCTCTACCAT 278 8537245 0.823812781 14 260 1773 0.938271605 2.181843588 0.330246914 0.143884892 0.265432099 278 19 1 304 3L:8537194-8537274 6 ergic53 FBtr0076626|FBtr0301629 8537117|8537117 8538013|8537581 AAGACT 6mer3-8 dme-miR-14-3p 3L + 8537184 8537275 3'utr ergic53 FlyBase G21826.1 ACGAGGAAACAGATTCGCACACCTGACTAGGCAGCAACTAAATTTAGTTAAAATGAAAGATTTAAGACTTCAGCGTAGCATGCTCTACCATT 131 8537245 0.980179067 12 118 829 0.900990099 1.481920138 0.262376238 0.381679389 0.599009901 131 15 5 182 3L:8537184-8537275 6 194 2020 FBgn0035909 3502.546667 181.83 278.43 0.05538827 1.06693065 0.696763998 2 2 2 0.2 dme-bantam-3p 7mer-m8 TGATCTC 3L 8564459 8564465 + 3L_8564459_8564465_+ 0.643325371 0.648120017 0.645722694 0.003390294 rhea FBtr0333109 8564005 8574409 3L + 8564441 8564486 3'utr rhea FlyBase G28835.1 TTTGTGCAGTGCCTTCAGTGATCTCCTCAAGGCAGCCGAGCCAGAA 53 8564459 0.977387238 5 50 331 0.942028986 1.335792102 0.057971014 0.283018868 0.449275362 53 2 2 65 3L:8564441-8564486 7 rhea FBtr0333109 8564005 8574409 TGATCTC 7mer-m8 dme-bantam-3p 3L + 8564443 8564485 3'utr rhea FlyBase G21840.1 TGTGCAGTGCCTTCAGTGATCTCCTCAAGGCAGCCGAGCCAGA 30 8564459 0.973834817 5 30 184 1 1.643452676 0.022727273 0.266666667 0.5 30 0 0 44 3L:8564443-8564485 7 41.5 2021 FBgn0260442 4425.776667 56.13 85.46 0.009376885 0.739355069 0.485607302 0 0 0 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT 3L 8564909 8564915 + 3L_8564909_8564915_+ 0.642962891 0.629816879 0.636389885 0.009295626 rhea FBtr0333109 8564005 8574409 3L + 8564882 8564936 3'utr rhea FlyBase G28837.1 TGATCCTAAGCTGAAGGCCGATCTCCTGGCAGCTGCTCGTGATGTGTCCAAGAGC 33 8564908 0.845735018 4 32 151 0.973684211 1.568201724 0.342105263 0.121212121 0.236842105 33 1 0 37 3L:8564882-8564936 7 rhea FBtr0333109 8564005 8574409 GGCAGCT 7mer-m8 dme-miR-980-3p 3L + 8564882 8564956 3'utr rhea FlyBase G21842.1 TGATCCTAAGCTGAAGGCCGATCTCCTGGCAGCTGCTCGTGATGTGTCCAAGAGCCTCACTGATATGTTGGAGCA 24 8564908 0.931830374 5 23 91 1 1.612783857 0.414634146 0.416666667 0.658536585 24 0 0 41 3L:8564882-8564956 7 27 2022 FBgn0260442 4425.776667 56.13 85.46 0.006100624 0.481026189 0.315937281 1 1 1 0.2 dme-miR-14-3p 6mer2-7 AGACTG 3L 8566049 8566054 + 3L_8566049_8566054_+ 0.978309298 0.998723506 0.988516402 0.014435019 rhea FBtr0333109 8564005 8574409 3L + 8566034 8566061 3'utr rhea FlyBase G28846.1 GAATCCAGCTATCATAGACTGTGCTGAT 14 8566048 0.739556424 3 11 78 0.866666667 1.113943352 0.066666667 0.071428571 0.133333333 14 2 0 13 3L:8566034-8566061 6 rhea FBtr0333109 8564005 8574409 AGACTG 6mer2-7 dme-miR-14-3p 3L + 8566035 8566063 3'utr rhea FlyBase G21847.1 AATCCAGCTATCATAGACTGTGCTGATGA 7 8566048 0.703734284 4 7 39 1 0.954242509 0.222222222 0.142857143 0.333333333 7 0 0 9 3L:8566035-8566063 6 10.5 2023 FBgn0260442 4425.776667 56.13 85.46 0.002372465 0.18706574 0.122864498 1 1 1 0.2 dme-miR-184-3p 7mer-A1 CCGTCCA 3L 8566280 8566286 + 3L_8566280_8566286_+ 0.736994633 0.797497373 0.767246003 0.04278194 rhea FBtr0333109 8564005 8574409 3L + 8566256 8566300 3'utr rhea FlyBase G28847.1 AATGAGTGAATTCCCACCTTCAAGCCGTCCATATGCCACTCTGCA 36 8566287 0.710957753 6 35 215 0.975609756 1.602059991 0.195121951 0.111111111 0.219512195 36 1 0 40 3L:8566256-8566300 7 rhea FBtr0333109 8564005 8574409 CCGTCCA 7mer-A1 dme-miR-184-3p 3L + 8566259 8566303 3'utr rhea FlyBase G21848.1 GAGTGAATTCCCACCTTCAAGCCGTCCATATGCCACTCTGCAATC 8 8566287 0.951168645 2 7 38 1 1 0.6 0.25 0.4 8 0 0 10 3L:8566259-8566303 7 21 2024 FBgn0260442 4425.776667 56.13 85.46 0.00474493 0.37413148 0.245728996 -7 -7 -7 0.2 dme-miR-1007-3p 7mer-A1 GAGCTTA 3L 8567694 8567700 + 3L_8567694_8567700_+ 0.8233466 0.823349395 0.823347997 1.98E-06 rhea FBtr0333109 8564005 8574409 3L + 8567667 8567706 3'utr rhea FlyBase G28853.1 AGTGGCCAGACGATGAACTCTGCTTCCGAGCTTATTGACA 6 8567701 0.815675635 5 5 43 0.833333333 0.698970004 0.166666667 0 0 6 1 0 5 3L:8567667-8567706 7 rhea FBtr0333109 8564005 8574409 GAGCTTA 7mer-A1 dme-miR-1007-3p 3L + 8567652 8567711 3'utr rhea FlyBase G21851.1 AACTTGCATGGATTCAGTGGCCAGACGATGAACTCTGCTTCCGAGCTTATTGACAAACTG 5 8567690 0.972506348 4 5 31 1 0.84509804 0.285714286 0.2 0.428571429 5 0 0 7 3L:8567652-8567711 7 4 2025 FBgn0260442 4425.776667 56.13 85.46 0.000903796 0.071263139 0.046805523 -7 4 -1.5 0.2 dme-miR-14-3p 7mer-m8 AAGACTG 3L 8570998 8571004 + 3L_8570998_8571004_+ 0.667087927 0.650103966 0.658595947 0.012009431 rhea FBtr0333109 8564005 8574409 3L + 8570981 8571069 3'utr rhea FlyBase G28858.1 ATGTGTCCTCACTACTAAAGACTGTGAAGGCTGTCGAGGATGAGCACACTCGCGGAACTCGTGCAATGGAGGCCACCGTAGAAGCCATC 31 8571005 0.988873903 4 29 166 0.944444444 1.230448921 0.472222222 0.161290323 0.277777778 31 1 1 34 3L:8570981-8571069 7 rhea FBtr0333109 8564005 8574409 AAGACTG 7mer-m8 dme-miR-14-3p 3L + 8570983 8571046 3'utr rhea FlyBase G21854.1 GTGTCCTCACTACTAAAGACTGTGAAGGCTGTCGAGGATGAGCACACTCGCGGAACTCGTGCAA 11 8571005 0.971328084 5 9 55 0.952380952 1.301029996 0.476190476 0.636363636 0.80952381 11 1 0 20 3L:8570983-8571046 7 17.5 2026 FBgn0260442 4425.776667 56.13 85.46 0.003954108 0.311776234 0.204774163 -7 -7 -7 0.2 dme-miR-282-5p 6mer2-7 GAGGCT 3L 8572060 8572065 + 3L_8572060_8572065_+ 0.415438844 0.550800557 0.483119701 0.095715247 rhea FBtr0333109 8564005 8574409 3L + 8572037 8572076 3'utr rhea FlyBase G28863.1 TGAAGTTTGACGAAATGATCTTGGAGGCTGCCAAGGGCAT 27 8572052 0.863490363 3 24 131 0.866666667 1.113943352 0.366666667 0.111111111 0.2 27 3 1 26 3L:8572037-8572076 6 rhea FBtr0333109 8564005 8574409 GAGGCT 6mer2-7 dme-miR-282-5p 3L + 8572036 8572077 3'utr rhea FlyBase G21858.1 ATGAAGTTTGACGAAATGATCTTGGAGGCTGCCAAGGGCATA 12 8572052 0.91152815 2 12 62 1 1.301029996 0.3 0.5 0.7 12 0 0 20 3L:8572036-8572077 6 18.5 2027 FBgn0260442 4425.776667 56.13 85.46 0.004180057 0.329592019 0.216475544 8 8 8 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 8574024 8574030 + 3L_8574024_8574030_+ 0.661593654 0.660661646 0.66112765 0.000659094 rhea FBtr0333109|FBtr0333108|FBtr0333106|FBtr0333107|FBtr0333105|FBtr0305210 8564005|8573788|8573788|8573788|8573788|8573788 8574409|8574409|8574409|8574409|8574409|8574409 3L + 8573997 8574046 3'utr rhea FlyBase G28873.1 AATCAAGTTTCAATGTTTTCGTATATCTGTGTTCTACGTGTTTATTTGCC 11 8574022 0.992622032 5 9 121 0.916666667 1.041392685 0.083333333 0.090909091 0.166666667 11 1 0 11 3L:8573997-8574046 7 rhea FBtr0333105|FBtr0305210|FBtr0333109|FBtr0333108|FBtr0333106|FBtr0333107 8573788|8573788|8564005|8573788|8573788|8573788 8574409|8574409|8574409|8574409|8574409|8574409 TGTGTTC 7mer-m8 dme-miR-317-3p 3L + 8574008 8574070 3'utr rhea FlyBase G21864.1 AATGTTTTCGTATATCTGTGTTCTACGTGTTTATTTGCCATTAAATTGCCCATATATATTTAT 13 8574022 0.991195885 7 13 138 1 1.322219295 0.19047619 0.384615385 0.619047619 13 0 0 21 3L:8574008-8574070 7 8.5 2028 FBgn0260442 4425.776667 56.13 85.46 0.001920567 0.151434171 0.099461736 2 2 2 0.2 dme-miR-305-3p 7mer-m8 ATGTGCC 3L 8574434 8574440 - 3L_8574434_8574440_- 0.673914376 0.667148138 0.670531257 0.004784497 CG6638 FBtr0076651 8574405 8574574 3L - 8574419 8574451 3'utr CG6638 FlyBase G35451.1 TATGTATATGTATGTGCCTTAATAAAAGAAGTA 8 8574438 0.880945592 5 8 67 1 1 0.1 0.25 0.4 8 0 0 10 3L:8574419-8574451 7 CG6638 FBtr0076651 8574405 8574574 ATGTGCC 7mer-m8 dme-miR-305-3p 3L - 8574417 8574446 3'utr CG6638 FlyBase G26825.1 ATATGTATGTGCCTTAATAAAAGAAGTAAA 6 8574438 0.698774397 3 6 39 1 0.954242509 0 0.5 0.666666667 6 0 0 9 3L:8574417-8574446 7 7 2029 FBgn0035911 221 17.94666667 27.59333333 0.031674208 0.390044577 0.253684465 -2 -2 -2 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA 3L 8574495 8574502 - 3L_8574495_8574502_- 0.619367894 0.617473567 0.61842073 0.001339472 CG6638 FBtr0076651 8574405 8574574 3L - 8574483 8574563 3'utr CG6638 FlyBase G35452.1 CATCTCTTTTTCCAATGTGGCAATAACGTGGACCAACTCTACTACCTGACAGACTAAATGTTGCATTTATTTTTTGAAGAT 41 8574504 0.885115464 12 37 318 0.916666667 1.643452676 0.125 0.170731707 0.291666667 41 4 0 44 3L:8574483-8574563 8 CG6638 FBtr0076651 8574405 8574574 TGCATTTA 8mer-A1 dme-miR-277-3p 3L - 8574485 8574536 3'utr CG6638 FlyBase G26826.1 GTGGACCAACTCTACTACCTGACAGACTAAATGTTGCATTTATTTTTTGAAG 14 8574503 0.849276496 5 13 125 0.909090909 1.301029996 0.318181818 0.5 0.681818182 14 2 0 20 3L:8574485-8574536 8 17 2030 FBgn0035911 221 17.94666667 27.59333333 0.076923077 0.947251114 0.616090843 2 1 1.5 0.2 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 8678483 8678490 + 3L_8678483_8678490_+ 0.643401522 0.643405979 0.643403751 3.18E-06 h FBtr0100153|FBtr0076569 8678422|8678422 8679253|8679253 3L + 8678265 8678585 stop_codon h FlyBase G28893.1 AGCTGTAGCTACGCCCCGCCCAGTCCGGCCAACTCTAGCTACGAGCCCATGGACATCAAGCCATCGGTCATCCAGCGCGTGCCAATGGAGCAGCAGCCCCTGTCGCTGGTGATCAAGAAGCAGATCAAGGAGGAGGAGCAGCCCTGGCGGCCCTGGTAGAGGGTGTCTGCATATGCATATCATATAGCATAGCCACCCCTATCGAATCTCCCGCTTTTAAGACTGACCCCCCACAACTCATCCAACTCGCACACATGCGCAGGCGTTGTGCGCATGCGCGTAGACATTTCACATCATTCGCCGGGATTGCGCAAATGTTGC 1311 8678481 0.94834906 48 1139 6193 0.867421719 1.596097044 0.113257828 0.118230359 0.229846769 1311 167 32 1302 3L:8678265-8678585 8 h FBtr0076569|FBtr0100153 8678422|8678422 8679253|8679253 AAGACTGA 8mer-A1 dme-miR-14-3p 3L + 8678259 8678596 stop_codon h FlyBase G21885.1 AGCAGCAGCTGTAGCTACGCCCCGCCCAGTCCGGCCAACTCTAGCTACGAGCCCATGGACATCAAGCCATCGGTCATCCAGCGCGTGCCAATGGAGCAGCAGCCCCTGTCGCTGGTGATCAAGAAGCAGATCAAGGAGGAGGAGCAGCCCTGGCGGCCCTGGTAGAGGGTGTCTGCATATGCATATCATATAGCATAGCCACCCCTATCGAATCTCCCGCTTTTAAGACTGACCCCCCACAACTCATCCAACTCGCACACATGCGCAGGCGTTGTGCGCATGCGCGTAGACATTTCACATCATTCGCCGGGATTGCGCAAATGTTGCTTTGAAGTGTT 885 8678481 0.928873114 47 731 4117 0.827932099 1.729569726 0.143518519 0.340112994 0.549382716 885 204 19 1073 3L:8678259-8678596 8 715 2031 FBgn0001168 3068.926667 171.7433333 259.7866667 0.232980477 4.163189255 2.752258263 2 2 2 0.2 dme-bantam-3p 6mer3-8 TGATCT 3L 8725790 8725795 + 3L_8725790_8725795_+ 0.99889845 0.956241815 0.977570132 0.030162771 CG6511 FBtr0333887|FBtr0076570 8725510|8725510 8726108|8726108 3L + 8725764 8725865 3'utr CG6511 FlyBase G28919.1 TTTGTAAGCGTTTGGAGACAGTTTTCTGATCTTGTCATCGGCAGCTCGGCTCTTATAAAGTCTGAGGGCCCTGGCCCAAACGTGTCGTTTATCTAGATTAGC 30 8725790 0.808227039 13 28 236 0.921052632 1.544068044 0.131578947 0.233333333 0.394736842 30 3 0 35 3L:8725764-8725865 6 CG6511 FBtr0333887|FBtr0076570 8725510|8725510 8726108|8726108 TGATCT 6mer3-8 dme-bantam-3p 3L + 8725770 8725841 3'utr CG6511 FlyBase G21903.1 AGCGTTTGGAGACAGTTTTCTGATCTTGTCATCGGCAGCTCGGCTCTTATAAAGTCTGAGGGCCCTGGCCCA 23 8725790 0.675211494 8 16 169 0.717948718 1.447158031 0.205128205 0.652173913 0.794871795 23 11 0 28 3L:8725770-8725841 6 15 2032 FBgn0035923 413.53 11.23333333 17.25666667 0.036273064 1.335311573 0.869229283 0 0 0 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3L 8890906 8890912 + 3L_8890906_8890912_+ 0.442288368 0.441083407 0.441685888 0.000852064 dally FBtr0305901 8889317 8891192 3L + 8890877 8890932 3'utr dally FlyBase G28925.1 ATTTGTATCATTATTATTTAACTATTGCATGTGATTAATAATATTTAAGTTAAACG 47 8890902 0.785910368 5 43 526 0.921568627 1.371067862 0.058823529 0.042553191 0.117647059 47 3 1 47 3L:8890877-8890932 7 dally FBtr0305901 8889317 8891192 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 8890886 8890930 3'utr dally FlyBase G21910.1 ATTATTATTTAACTATTGCATGTGATTAATAATATTTAAGTTAAA 22 8890902 0.769376841 4 18 236 0.842105263 1.505149978 0 0.454545455 0.684210526 22 6 0 32 3L:8890886-8890930 7 33.5 2033 FBgn0263930 612.92 16.66666667 25.74 0.054656399 2.01 1.301476301 4 4 4 0.2 dme-miR-986-5p 7mer-m8 ATTCGAG 3L 892325 892331 + 3L_892325_892331_+ 0.665474285 0.641986831 0.653730558 0.016608171 CG32479 FBtr0333267|FBtr0333266|FBtr0072589 892174|892174|892174 895313|893520|893520 3L + 892275 892357 3'utr CG32479 FlyBase G26957.1 GCGAGTTTGGTTTTATATGCATATACATATACAAATTAACAATTAGATATATTCGAGCGGTATATAGTTAAGCCCAAAGTCCA 15 892323 0.72800944 11 13 104 0.894736842 0.929418926 0.105263158 0.133333333 0.315789474 15 1 1 17 3L:892275-892357 7 CG32479 FBtr0072589|FBtr0333266|FBtr0333267 892174|892174|892174 893520|893520|895313 ATTCGAG 7mer-m8 dme-miR-986-5p 3L + 892267 892343 3'utr CG32479 FlyBase G20405.1 GCGAGAATGCGAGTTTGGTTTTATATGCATATACATATACAAATTAACAATTAGATATATTCGAGCGGTATATAGTT 9 892310 0.987675896 6 7 73 0.857142857 1.079181246 0.142857143 0.333333333 0.571428571 9 2 0 12 3L:892267-892343 7 6 2034 FBgn0052479 4815.663333 78.18666667 119.8133333 0.001245934 0.076739427 0.050077899 2 15 8.5 0.2 dme-miR-305-5p 7mer-A1 GTACAAA 3L 892480 892486 + 3L_892480_892486_+ 0.772180913 0.773067937 0.772624425 0.000627204 CG32479 FBtr0333267|FBtr0333266|FBtr0072589 892174|892174|892174 895313|893520|893520 3L + 892425 892521 3'utr CG32479 FlyBase G26958.2 TTAAGGTTGAGTAGAAAAATAGGCAGCAAAAGAAACTCGTTGGAACGAAAACTTTGTACAAAGAGAAACGAAAGAACTCTGTAAACTAAACAGCGAG 313 892478 0.989908944 14 307 1020 0.98944591 1.971971276 0.319261214 0.166134185 0.311345646 313 1 3 375 3L:892425-892521 7 CG32479 FBtr0072589|FBtr0333266|FBtr0333267 892174|892174|892174 893520|893520|895313 GTACAAA 7mer-A1 dme-miR-305-5p 3L + 892416 892521 3'utr CG32479 FlyBase G20406.2 AGACTAGAATTAAGGTTGAGTAGAAAAATAGGCAGCAAAAGAAACTCGTTGGAACGAAAACTTTGTACAAAGAGAAACGAAAGAACTCTGTAAACTAAACAGCGAG 243 892478 0.940600746 14 238 821 0.983002833 2.06320822 0.348441926 0.33744856 0.543909348 243 4 2 347 3L:892416-892521 7 201.5 2035 FBgn0052479 4815.663333 78.18666667 119.8133333 0.041842626 2.577165757 1.681782773 2 2 2 0.2 dme-miR-986-5p 7mer-m8 ATTCGAG 3L 893255 893261 + 3L_893255_893261_+ 0.602294609 0.504484642 0.553389625 0.069162114 CG32479 FBtr0333267|FBtr0333266|FBtr0072589 892174|892174|892174 895313|893520|893520 3L + 893214 893307 3'utr CG32479 FlyBase G26962.1 GATTGTCTCCCCGGCTTGGATGCGATGTTTGCCTTCATGATATTCGAGTCCTTAACTTTCTTTTCTCAGACCTAGAGCATTTAGTTTGTACATC 37 893256 0.989470011 10 36 349 0.955555556 1.633468456 0.044444444 0.162162162 0.311111111 37 2 0 43 3L:893214-893307 7 CG32479 FBtr0072589|FBtr0333266|FBtr0333267 892174|892174|892174 893520|893520|895313 ATTCGAG 7mer-m8 dme-miR-986-5p 3L + 893217 893276 3'utr CG32479 FlyBase G20411.1 TGTCTCCCCGGCTTGGATGCGATGTTTGCCTTCATGATATTCGAGTCCTTAACTTTCTTT 28 893255 0.759927122 7 26 255 0.961538462 1.397940009 0.038461538 0.5 0.730769231 28 1 1 50 3L:893217-893276 7 28 2036 FBgn0052479 4815.663333 78.18666667 119.8133333 0.00581436 0.358117326 0.233696862 -1 0 -0.5 0.2 dme-bantam-3p 6mer2-7 GATCTC 3L 8932914 8932919 - 3L_8932914_8932919_- 0.997230497 0.995339913 0.996285205 0.001336856 CG43783 FBtr0331518|FBtr0331519|FBtr0331516|FBtr0331517 8932233|8932233|8932233|8932233 8933062|8933062|8933062|8933062 3L - 8932890 8932938 5'utr-coding CG43783 FlyBase G35494.1 AAGCTTAGATTAAATTTTCGATCTCCAGTTCCGGTTTCGAATACTTAAT 19 8932923 0.985993081 6 18 186 0.954545455 1.021189299 0.045454545 0.157894737 0.272727273 19 0 1 21 3L:8932890-8932938 6 CG43783 FBtr0331517|FBtr0331516|FBtr0331519|FBtr0331518 8932233|8932233|8932233|8932233 8933062|8933062|8933062|8933062 GATCTC 6mer2-7 dme-bantam-3p 3L - 8932897 8932937 5'utr-coding CG43783 FlyBase G26856.1 AGCTTAGATTAAATTTTCGATCTCCAGTTCCGGTTTCGAAT 14 8932923 0.686548543 5 11 136 0.8 1.204119983 0 0.357142857 0.55 14 4 0 16 3L:8932897-8932937 6 16 2037 FBgn0264305 845.6866667 21.05333333 32.24666667 0.018919537 0.759974668 0.496175315 4 4 4 0.2 dme-miR-263a-5p 6mer3-8 GTGCCA 3L 893491 893496 + 3L_893491_893496_+ 0.999999989 0.999926378 0.999963183 5.20E-05 CG32479 FBtr0333267|FBtr0333266|FBtr0072589 892174|892174|892174 895313|893520|893520 3L + 893469 893526 3'utr-intron CG32479 FlyBase G26964.1 ATATATATTATTTATAGATATCGTGCCAATGTTAAAACATCTAAAAATTTTCAAAAAA 12 893499 0.708699866 8 12 106 1 1.079181246 0.166666667 0 0 12 0 0 12 3L:893469-893526 6 CG32479 FBtr0072589|FBtr0333266|FBtr0333267 892174|892174|892174 893520|893520|895313 GTGCCA 6mer3-8 dme-miR-263a-5p 3L + 893473 893518 3'utr CG32479 FlyBase G20413.1 ATATTATTTATAGATATCGTGCCAATGTTAAAACATCTAAAAATTT 11 893492 0.771565008 4 10 87 0.9375 1.176091259 0 0.363636364 0.5625 11 1 0 15 3L:893473-893518 6 10.5 2038 FBgn0052479 4815.663333 78.18666667 119.8133333 0.002180385 0.134293997 0.087636323 -8 -1 -4.5 0.2 dme-miR-79-3p 7mer-A1 AGCTTTA 3L 8939394 8939400 - 3L_8939394_8939400_- 0.823348493 0.823349282 0.823348888 5.66E-07 orb2 FBtr0331515|FBtr0331514 8937098|8939063 8942890|8942890 3L - 8939376 8939411 3'utr orb2 FlyBase G35506.1 GTCGGATTGACAGCTTTAGTTTTATAGAGAATCTTG 12 8939395 0.870360101 5 12 109 1 1.204119983 0.25 0.25 0.4375 12 0 0 16 3L:8939376-8939411 7 orb2 FBtr0331515|FBtr0331514 8937098|8939063 8942890|8942890 AGCTTTA 7mer-A1 dme-miR-79-3p 3L - 8939380 8939410 3'utr orb2 FlyBase G26863.1 TCGGATTGACAGCTTTAGTTTTATAGAGAAT 5 8939396 0.78121999 2 4 47 0.769230769 1 0.230769231 0.8 0.923076923 5 3 0 10 3L:8939380-8939410 7 8.5 2039 FBgn0264307 292.6133333 6.573333333 10.15 0.029048574 1.293103448 0.837438424 -5 -4 -4.5 0.2 dme-miR-8-3p 8mer-A1 CAGTATTA 3L 8941261 8941268 - 3L_8941261_8941268_- 0.471418804 0.441541392 0.456480098 0.021126512 orb2 FBtr0331515|FBtr0331514 8937098|8939063 8942890|8942890 3L - 8941247 8941294 3'utr orb2 FlyBase G35508.1 AACAAAACAGTCAAATTGCTTGTGTTCAGTATTATGATTTATTTATGA 48 8941273 0.617789618 7 48 460 1 1.77815125 0.233333333 0.1875 0.35 48 0 0 60 3L:8941247-8941294 8 orb2 FBtr0331515|FBtr0331514 8937098|8939063 8942890|8942890 CAGTATTA 8mer-A1 dme-miR-8-3p 3L - 8941249 8941290 3'utr orb2 FlyBase G26865.1 AAACAGTCAAATTGCTTGTGTTCAGTATTATGATTTATTTAT 40 8941274 0.659603857 5 38 390 0.962962963 1.716003344 0.203703704 0.275 0.462962963 40 2 0 52 3L:8941249-8941290 8 44 2040 FBgn0264307 292.6133333 6.573333333 10.15 0.150369088 6.693711968 4.334975369 5 6 5.5 0.2 dme-miR-277-3p 7mer-m8 TGCATTT 3L 8941368 8941374 - 3L_8941368_8941374_- 0.618429423 0.613878966 0.616154194 0.003217619 orb2 FBtr0331515|FBtr0331513|FBtr0331514 8937098|8941311|8939063 8942890|8942890|8942890 3L - 8941350 8941402 3'utr orb2 FlyBase G35509.1 AACAACACATTTACACTGAAAGTCTGTTTGCATTTGTTGCCATTTGGCTTAAT 14 8941375 0.870932845 5 13 118 0.941176471 1.204119983 0.176470588 0.214285714 0.352941176 14 1 0 16 3L:8941350-8941402 7 orb2 FBtr0331515|FBtr0331513|FBtr0331514 8937098|8941311|8939063 8942890|8942890|8942890 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 8941350 8941402 3'utr orb2 FlyBase G26866.1 AACAACACATTTACACTGAAAGTCTGTTTGCATTTGTTGCCATTTGGCTTAAT 11 8941375 0.858351224 5 11 102 1 1.176091259 0.066666667 0.272727273 0.466666667 11 0 0 15 3L:8941350-8941402 7 9.5 2041 FBgn0264307 292.6133333 6.573333333 10.15 0.032466053 1.445233266 0.935960591 1 1 1 0.2 dme-miR-282-5p 7mer-A1 GAGGCTA 3L 8942186 8942192 - 3L_8942186_8942192_- 0.801483976 0.791861414 0.796672695 0.006804206 orb2 FBtr0331515|FBtr0331513|FBtr0331514 8937098|8941311|8939063 8942890|8942890|8942890 3L - 8942147 8942205 3'utr orb2 FlyBase G35513.1 TTGTATGCCAATCGAGGCTAGTCCTAAAATTATTAGTGAGCTGCTCACCCTCTCTCGAA 12 8942195 0.971319829 5 10 65 0.823529412 1.146128036 0.235294118 0.333333333 0.529411765 12 3 0 14 3L:8942147-8942205 7 orb2 FBtr0331515|FBtr0331513|FBtr0331514 8937098|8941311|8939063 8942890|8942890|8942890 GAGGCTA 7mer-A1 dme-miR-282-5p 3L - 8942133 8942208 3'utr orb2 FlyBase G26867.1 ATCTTGTATGCCAATCGAGGCTAGTCCTAAAATTATTAGTGAGCTGCTCACCCTCTCTCGAAAAGGCTTTTTGCTT 10 8942181 0.974224651 7 10 63 1 1.113943352 0.153846154 0.3 0.461538462 10 0 0 13 3L:8942133-8942208 7 8 2042 FBgn0264307 292.6133333 6.573333333 10.15 0.027339834 1.21703854 0.78817734 3 -11 -4 0.2 dme-miR-252-5p 6mer3-8 GTACTT 3L 8942359 8942364 - 3L_8942359_8942364_- 0.915952337 0.885067692 0.900510014 0.02183871 orb2 FBtr0331515|FBtr0331513|FBtr0331514|FBtr0331512 8937098|8941311|8939063|8942309 8942890|8942890|8942890|8942890 3L - 8942343 8942392 3'utr orb2 FlyBase G35515.1 TGCGTTCGATGCCTGCACAGTATTTTTTGTACTTTATATTTTTAGCAACA 24 8942368 0.989622435 8 20 181 0.935483871 1.462397998 0.258064516 0.208333333 0.387096774 24 2 0 29 3L:8942343-8942392 6 orb2 FBtr0331515|FBtr0331513|FBtr0331514|FBtr0331512 8937098|8941311|8939063|8942309 8942890|8942890|8942890|8942890 GTACTT 6mer3-8 dme-miR-252-5p 3L - 8942362 8942397 3'utr orb2 FlyBase G26869.1 GATTTTGCGTTCGATGCCTGCACAGTATTTTTTGTA 20 8942367 0.643246597 7 19 190 0.933333333 1.447158031 0.1 0.4 0.6 20 2 0 28 3L:8942362-8942397 2 14 2043 FBgn0264307 292.6133333 6.573333333 10.15 0.04784471 2.129817444 1.379310345 4 3 3.5 0.2 dme-miR-1008-3p 6mer2-7 GCTGTG 3L 894753 894758 + 3L_894753_894758_+ 0.999998799 0.999981528 0.999990164 1.22E-05 CG32479 FBtr0333267 892174 895313 3L + 894685 894776 3'utr CG32479 FlyBase G26971.1 TTGTAATACCCAAGTCACATTCTGTTGTCCCCGATTAATGTATGTTTTAGTTTTAAGTAGTTTCTAAGGCTGTGTAACTAACTAACATAAGT 49 894746 0.98993941 14 45 542 0.927272727 1.707570176 0.036363636 0.102040816 0.2 49 4 0 51 3L:894685-894776 6 CG32479 FBtr0333267 892174 895313 GCTGTG 6mer2-7 dme-miR-1008-3p 3L + 894689 894776 3'utr CG32479 FlyBase G20419.1 AATACCCAAGTCACATTCTGTTGTCCCCGATTAATGTATGTTTTAGTTTTAAGTAGTTTCTAAGGCTGTGTAACTAACTAACATAAGT 42 894747 0.993944659 14 35 451 0.852459016 1.414973348 0.081967213 0.357142857 0.557377049 42 8 1 52 3L:894689-894776 6 40.5 2044 FBgn0052479 4815.663333 78.18666667 119.8133333 0.008410056 0.517991132 0.338025818 7 6 6.5 0.2 dme-miR-14-3p 7mer-m8 AAGACTG 3L 8961313 8961319 - 3L_8961313_8961319_- 0.670928723 0.670520036 0.670724379 0.000288995 CG5660 FBtr0346542|FBtr0076560 8961272|8961272 8961399|8961399 3L - 8961298 8961336 3'utr CG5660 FlyBase G35523.1 CTGTTTGTTTAGAATTAAAGACTGCAATATTTATTAAAT 14 8961322 0.755189438 5 14 114 1 1.176091259 0.133333333 0.071428571 0.133333333 14 0 0 15 3L:8961298-8961336 7 CG5660 FBtr0346542|FBtr0076560 8961272|8961272 8961399|8961399 AAGACTG 7mer-m8 dme-miR-14-3p 3L - 8961298 8961330 3'utr CG5660 FlyBase G26875.1 GTTTAGAATTAAAGACTGCAATATTTATTAAAT 8 8961322 0.73731544 5 8 54 1 1.041392685 0.272727273 0.375 0.545454545 8 0 0 11 3L:8961298-8961330 7 11 2045 FBgn0035942 106.3333333 4.03 6.186666667 0.103448276 2.729528536 1.778017241 3 3 3 0.2 dme-miR-8-3p 7mer-A1 AGTATTA 3L 8971682 8971688 + 3L_8971682_8971688_+ 0.820420664 0.823346953 0.821883809 0.002069207 CG5026 FBtr0076516 8971179 8971752 3L + 8971584 8971694 3'utr CG5026 FlyBase G28965.1 TTTTATGGAATTTTTAGCGTATAAGTCTCCAAAATTACCTATTTATAGTACTTACTTGTGTCAGTTATTTAGTGGTCAACAAGCCACAGATCAAATTAAGTATTATAAACT 9 8971680 0.984019702 6 9 78 1 0.954242509 0 0 0 9 0 0 9 3L:8971584-8971694 7 CG5026 FBtr0076516 8971179 8971752 AGTATTA 7mer-A1 dme-miR-8-3p 3L + 8971661 8971697 3'utr CG5026 FlyBase G21935.1 AACAAGCCACAGATCAAATTAAGTATTATAAACTCAA 5 8971680 0.976598387 3 5 34 1 0.698970004 0 0 0 5 0 0 5 3L:8971661-8971697 7 4.5 2046 FBgn0035945 330 15.41 23.52 0.013636364 0.29201817 0.191326531 2 2 2 0.2 dme-miR-252-5p 6mer3-8 GTACTT 3L 8972165 8972170 - 3L_8972165_8972170_- 0.99519357 0.98637989 0.99078673 0.006232227 pix FBtr0076557|FBtr0076558 8972054|8972054 8972332|8972332 3L - 8972145 8972256 3'utr pix FlyBase G35527.1 TTCTTTCGTTGAAGAACACATTTGCTTTCAAATTAATTTGTTATTGTTGTCGAGGATTGCGTACAATCGAAAATTGGGGATTAATTGTACTTGATTAAAGTGAGTTTTATAT 32 8972171 0.769394638 12 30 265 0.972222222 1.243038049 0.361111111 0.125 0.222222222 32 0 1 35 3L:8972145-8972256 6 pix FBtr0076557|FBtr0076558 8972054|8972054 8972332|8972332 GTACTT 6mer3-8 dme-miR-252-5p 3L - 8972143 8972196 3'utr pix FlyBase G26878.1 GTACAATCGAAAATTGGGGATTAATTGTACTTGATTAAAGTGAGTTTTATATAC 21 8972171 0.980609178 6 20 182 1 1.447158031 0.464285714 0.238095238 0.428571429 21 0 0 28 3L:8972143-8972196 6 21 2047 FBgn0086706 1403.55 77.59666667 118.19 0.01496206 0.270630182 0.177680007 1 1 1 0.2 dme-miR-190-5p 6mer3-8 ACATAT 3L 8991030 8991035 - 3L_8991030_8991035_- 0.859224843 0.997701445 0.928463144 0.097917743 smg FBtr0076550|FBtr0076551|FBtr0076549|FBtr0290103|FBtr0290104 8990315|8990315|8990315|8990315|8990315 8991495|8991495|8991495|8992080|8991495 3L - 8991009 8991048 3'utr smg FlyBase G35549.1 GAGAATCGGAACCACATATTGTATTTTGCATATTTAAGCG 7 8991032 0.983461999 2 6 50 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 3L:8991009-8991048 6 smg FBtr0290104|FBtr0076549|FBtr0290103|FBtr0076550|FBtr0076551 8990315|8990315|8990315|8990315|8990315 8991495|8991495|8992080|8991495|8991495 ACATAT 6mer3-8 dme-miR-190-5p 3L - 8991004 8991054 3'utr smg FlyBase G26896.1 GTGTTTGAGAATCGGAACCACATATTGTATTTTGCATATTTAAGCGTAAGC 6 8991031 0.976975838 3 5 43 1 1.113943352 0.461538462 0.666666667 0.846153846 6 0 0 13 3L:8991004-8991054 6 5 2048 FBgn0016070 840.7666667 21.58333333 33.01666667 0.005946953 0.231660232 0.151438667 -3 -4 -3.5 0.2 dme-miR-932-5p 8mer-A1 GGAATTGA 3L 8991290 8991297 - 3L_8991290_8991297_- 0.569501254 0.674926517 0.622213886 0.074546874 smg FBtr0076550|FBtr0076551|FBtr0076549|FBtr0290103|FBtr0290104 8990315|8990315|8990315|8990315|8990315 8991495|8991495|8991495|8992080|8991495 3L - 8991255 8991320 3'utr smg FlyBase G35552.1 AAGGAAGAAAGCTGGATGGAGAGGGAATTGAAAAGTGAGAATTGAGAAACGAGAGCTGATAATTGT 18 8991293 0.867540953 7 16 63 0.909090909 1 0.045454545 0.166666667 0.318181818 18 1 1 20 3L:8991255-8991320 8 smg FBtr0290104|FBtr0076549|FBtr0290103|FBtr0076550|FBtr0076551 8990315|8990315|8990315|8990315|8990315 8991495|8991495|8992080|8991495|8991495 GGAATTGA 8mer-A1 dme-miR-932-5p 3L - 8991278 8991320 3'utr smg FlyBase G26899.1 AAGGAAGAAAGCTGGATGGAGAGGGAATTGAAAAGTGAGAATT 6 8991293 0.856498459 3 6 16 1 1.113943352 0 0.666666667 0.846153846 6 0 0 13 3L:8991278-8991320 8 10 2049 FBgn0016070 840.7666667 21.58333333 33.01666667 0.011893906 0.463320463 0.302877335 -4 -4 -4 0.2 dme-miR-14-3p 7mer-A1 AGACTGA 3L 8991353 8991359 - 3L_8991353_8991359_- 0.743868911 0.768080451 0.755974681 0.017120187 smg FBtr0076550|FBtr0076551|FBtr0076549|FBtr0290103|FBtr0290104 8990315|8990315|8990315|8990315|8990315 8991495|8991495|8991495|8992080|8991495 3L - 8991331 8991386 3'utr smg FlyBase G35553.1 TAAAATGAACTCTGCATCGTGACCATGAGACTGACTAAGATTACTTTTCGCAACTA 934 8991361 0.948247331 10 919 6276 0.98394712 2.540746464 0.271010387 0.124197002 0.227573182 934 15 2 1042 3L:8991331-8991386 7 smg FBtr0290104|FBtr0076549|FBtr0290103|FBtr0076550|FBtr0076551 8990315|8990315|8990315|8990315|8990315 8991495|8991495|8992080|8991495|8991495 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 8991332 8991384 3'utr smg FlyBase G26900.1 AAATGAACTCTGCATCGTGACCATGAGACTGACTAAGATTACTTTTCGCAACT 481 8991361 0.932388816 7 466 3020 0.973262032 2.862131379 0.279411765 0.376299376 0.598930481 481 20 0 728 3L:8991332-8991384 7 702.5 2050 FBgn0016070 840.7666667 21.58333333 33.01666667 0.835546921 32.54826255 21.27713276 2 2 2 0.2 dme-miR-1008-3p 8mer-A1 AGCTGTGA 3L 9002317 9002324 + 3L_9002317_9002324_+ 0.492640643 0.449592718 0.47111668 0.030439462 CG5087 FBtr0076520|FBtr0333908 9002128|9002128 9002566|9002566 3L + 9002293 9002344 3'utr CG5087 FlyBase G28992.1 ATTAAGAAGTAAACATAAACGTATAGCTGTGATAAAACTATAATAAACTAAC 156 9002316 0.768287288 6 145 932 0.932960894 1.921686475 0.005586592 0.128205128 0.240223464 156 11 1 167 3L:9002293-9002344 8 CG5087 FBtr0076520|FBtr0333908 9002128|9002128 9002566|9002566 AGCTGTGA 8mer-A1 dme-miR-1008-3p 3L + 9002296 9002342 3'utr CG5087 FlyBase G21949.1 AAGAAGTAAACATAAACGTATAGCTGTGATAAAACTATAATAAACTA 90 9002316 0.721167928 8 79 520 0.893129771 1.591064607 0.007633588 0.322222222 0.534351145 90 12 2 117 3L:9002296-9002342 8 123 2051 FBgn0035953 365.8866667 11.12666667 17.00666667 0.33616967 11.05452367 7.23245786 1 1 1 0.2 dme-miR-1008-3p 8mer-A1 AGCTGTGA 3L 9067849 9067856 - 3L_9067849_9067856_- 0.409231007 0.435122948 0.422176977 0.018308338 CG4911 FBtr0345351 9067193 9070515 3L - 9067834 9067884 3'utr CG4911 FlyBase G35572.1 TAAAAGTTATAAGAGCAAAAGTGAAGAAAGCTGTGATACAACAAGATCCAA 13 9067863 0.920346242 5 11 38 0.941176471 1.204119983 0.117647059 0.230769231 0.411764706 13 1 0 16 3L:9067834-9067884 8 CG4911 FBtr0345351 9067193 9070515 AGCTGTGA 8mer-A1 dme-miR-1008-3p 3L - 9067843 9067899 3'utr CG4911 FlyBase G26917.1 TATGCAAGTTATGCTTAAAAGTTATAAGAGCAAAAGTGAAGAAAGCTGTGATACAAC 10 9067853 0.957703963 4 8 39 0.733333333 0.740362689 0.066666667 0.4 0.6 10 3 1 11 3L:9067843-9067899 8 8 2052 FBgn0035959 1732.163333 43.72333333 67.07666667 0.004618502 0.182968667 0.119266511 7 -3 2 0.2 dme-miR-1008-3p 6mer2-7 GCTGTG 3L 9068853 9068858 - 3L_9068853_9068858_- 0.345422697 0.348827909 0.347125303 0.00240784 CG4911 FBtr0345351 9067193 9070515 3L - 9068830 9068885 3'utr CG4911 FlyBase G35578.1 TTATGTAACCAGACCTGTTTGTATGTGGCTGTGCATTTAATTTAAGTCTAGTACGT 55 9068860 0.848040432 5 54 615 0.983050847 1.763427994 0.084745763 0.072727273 0.13559322 55 1 0 58 3L:9068830-9068885 6 CG4911 FBtr0345351 9067193 9070515 GCTGTG 6mer2-7 dme-miR-1008-3p 3L - 9068813 9068882 3'utr CG4911 FlyBase G26920.1 TGTAACCAGACCTGTTTGTATGTGGCTGTGCATTTAATTTAAGTCTAGTACGTACCAAACACAACAACCA 43 9068860 0.991976752 6 43 474 1 1.77815125 0.066666667 0.325581395 0.516666667 43 0 0 60 3L:9068813-9068882 6 46.5 2053 FBgn0035959 1732.163333 43.72333333 67.07666667 0.026845043 1.063505375 0.693236595 2 2 2 0.2 dme-miR-92b-3p 7mer-A1 TGCAATA 3L 9069042 9069048 - 3L_9069042_9069048_- 0.782910219 0.758940066 0.770925142 0.01694942 CG4911 FBtr0345351 9067193 9070515 3L - 9069027 9069073 3'utr CG4911 FlyBase G35580.1 ATGCATGTAATCATTTTTTATGAACTGCAATAGCAAATATTATTTTT 5 9069043 0.978364312 4 5 42 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3L:9069027-9069073 7 CG4911 FBtr0345351 9067193 9070515 TGCAATA 7mer-A1 dme-miR-92b-3p 3L - 9069037 9069082 3'utr CG4911 FlyBase G26921.1 ATGTAACCAATGCATGTAATCATTTTTTATGAACTGCAATAGCAAA 5 9069054 0.984929473 4 5 35 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3L:9069037-9069082 7 3 2054 FBgn0035959 1732.163333 43.72333333 67.07666667 0.001731938 0.06861325 0.044724942 -5 6 0.5 0.2 dme-bantam-3p 7mer-A1 GATCTCA 3L 9069143 9069149 - 3L_9069143_9069149_- 0.817664618 0.816214649 0.816939633 0.001025305 CG4911 FBtr0345351 9067193 9070515 3L - 9069108 9069178 3'utr CG4911 FlyBase G35581.1 GGGACAAGTAACAACCGCAAACAAAATGCGATCTCACAGATAACTCCTACAACTATCCAATCGACCATCTA 75 9069152 0.969327952 5 70 230 0.927710843 1.40936947 0.048192771 0.093333333 0.180722892 75 4 2 77 3L:9069108-9069178 7 CG4911 FBtr0345351 9067193 9070515 GATCTCA 7mer-A1 dme-bantam-3p 3L - 9069120 9069187 3'utr CG4911 FlyBase G26922.1 TTGGTTTCTGGGACAAGTAACAACCGCAAACAAAATGCGATCTCACAGATAACTCCTACAACTATCCA 51 9069152 0.951964142 5 44 173 0.817073171 1.826074803 0.048780488 0.450980392 0.658536585 51 15 0 67 3L:9069120-9069187 7 59.5 2055 FBgn0035959 1732.163333 43.72333333 67.07666667 0.034350109 1.360829458 0.887044675 3 3 3 0.2 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 3L 9069343 9069350 - 3L_9069343_9069350_- 0.673825806 0.67376702 0.673796413 4.16E-05 CG4911 FBtr0345351 9067193 9070515 3L - 9069327 9069372 3'utr CG4911 FlyBase G35583.1 AACAGCAACAACAACAAAAATGGTACCTGAAGATCATGCCGAGCAT 23 9069352 0.935337378 2 19 70 0.833333333 1.301029996 0.041666667 0.043478261 0.083333333 23 4 0 20 3L:9069327-9069372 8 CG4911 FBtr0345351 9067193 9070515 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3L - 9069318 9069370 3'utr CG4911 FlyBase G26924.1 CAGCAACAACAACAAAAATGGTACCTGAAGATCATGCCGAGCATTTAGAGAAC 17 9069352 0.927031509 3 14 47 0.833333333 1.301029996 0 0.411764706 0.583333333 17 4 0 20 3L:9069318-9069370 8 19 2056 FBgn0035959 1732.163333 43.72333333 67.07666667 0.010968942 0.434550583 0.283257964 2 2 2 0.2 dme-miR-283-5p 8mer-A1 TGATATTA 3L 9069700 9069707 - 3L_9069700_9069707_- 0.592156104 0.592188017 0.592172061 2.26E-05 CG4911 FBtr0345351|FBtr0331549|FBtr0076542 9067193|9069647|9069647 9070515|9070515|9070515 3L - 9069676 9069738 3'utr CG4911 FlyBase G35586.1 CGCTAAGCGCCGCCATTTGTGTAGTTTAAAGTGATATTACCAGCAACAGCAAAGCAAAATGTA 29 9069701 0.986657182 8 26 216 0.918918919 1.531478917 0.27027027 0.206896552 0.378378378 29 3 0 34 3L:9069676-9069738 8 CG4911 FBtr0076542|FBtr0345351|FBtr0331549 9069647|9067193|9069647 9070515|9070515|9070515 TGATATTA 8mer-A1 dme-miR-283-5p 3L - 9069681 9069746 3'utr CG4911 FlyBase G26926.1 TCCTCGTTCGCTAAGCGCCGCCATTTGTGTAGTTTAAAGTGATATTACCAGCAACAGCAAAGCAAA 18 9069713 0.982269566 6 17 127 0.956521739 1.342422681 0.52173913 0.222222222 0.391304348 18 1 0 22 3L:9069681-9069746 8 20 2057 FBgn0035959 1732.163333 43.72333333 67.07666667 0.011546255 0.457421667 0.298166277 -6 6 0 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 9069795 9069801 - 3L_9069795_9069801_- 0.625542895 0.590622341 0.608082618 0.024692593 CG4911 FBtr0345351|FBtr0345351|FBtr0345351|FBtr0331549|FBtr0331549|FBtr0331549|FBtr0076542|FBtr0076542|FBtr0076542 9067193|9067193|9067193|9069647|9069647|9069647|9069647|9069647|9069647 9070515|9070515|9070515|9070515|9070515|9070515|9070515|9070515|9070515 3L - 9069784 9069841 3'utr CG4911 FlyBase G35587.1 TTTGTAGTAGTGTGAATAAGTACAGAATCTGGCGCTCAATTGTGATAAACCAACAAAC 81 9069802 0.707621314 10 73 435 0.894736842 1.327358934 0.168421053 0.135802469 0.263157895 81 7 3 85 3L:9069784-9069841 7 CG4911 FBtr0076542|FBtr0076542|FBtr0076542|FBtr0345351|FBtr0345351|FBtr0345351|FBtr0331549|FBtr0331549|FBtr0331549 9069647|9069647|9069647|9067193|9067193|9067193|9069647|9069647|9069647 9070515|9070515|9070515|9070515|9070515|9070515|9070515|9070515|9070515 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 9069762 9069823 3'utr CG4911 FlyBase G26927.1 AGTACAGAATCTGGCGCTCAATTGTGATAAACCAACAAACAACAACATAAGCAAATGTAACA 57 9069802 0.973574064 5 51 308 0.898876404 1.301029996 0.191011236 0.421052632 0.629213483 57 6 3 80 3L:9069762-9069823 7 65 2058 FBgn0035959 1732.163333 43.72333333 67.07666667 0.03752533 1.486620416 0.969040402 1 1 1 0.2 dme-miR-305-5p 8mer-A1 AGTACAAA 3L 9070214 9070221 - 3L_9070214_9070221_- 0.60536159 0.605360704 0.605361147 6.36E-07 CG4911 FBtr0345351|FBtr0331549|FBtr0076542 9067193|9069647|9069647 9070515|9070515|9070515 3L - 9070152 9070253 3'utr CG4911 FlyBase G35591.1 GTAATCAAAATCGCGATTAGCCCTTGTTTATTAGTACAAAAGCGACAGATCAAGAGCGACAGGAATGTTAGGAGCAAAGCAAAAGACTTGAGCACTTCACAA 46 9070222 0.859118576 9 39 275 0.862745098 1.342422681 0.235294118 0.108695652 0.196078431 46 6 1 44 3L:9070152-9070253 8 CG4911 FBtr0076542|FBtr0345351|FBtr0331549 9069647|9067193|9069647 9070515|9070515|9070515 AGTACAAA 8mer-A1 dme-miR-305-5p 3L - 9070153 9070283 3'utr CG4911 FlyBase G26929.1 ATGTTAAATTTTCCTAATTTCTTAGCCTTTGTAATCAAAATCGCGATTAGCCCTTGTTTATTAGTACAAAAGCGACAGATCAAGAGCGACAGGAATGTTAGGAGCAAAGCAAAAGACTTGAGCACTTCACA 26 9070222 0.980559667 11 21 160 0.761904762 1.505149978 0.261904762 0.423076923 0.642857143 26 10 0 32 3L:9070153-9070283 8 24.5 2059 FBgn0035959 1732.163333 43.72333333 67.07666667 0.014144163 0.560341542 0.36525369 1 1 1 0.2 dme-miR-276a-3p 6mer3-8 AGTTCC 3L 9097232 9097237 + 3L_9097232_9097237_+ 0.729267216 0.941587675 0.835427445 0.150133265 CG13315 FBtr0076530|FBtr0340709 9097219|9097219 9097494|9097374 3L + 9097225 9097275 3'utr CG13315 FlyBase G29046.1 TAGTTTTAGTTCCGGCCTTGACATGTTCCTAATGTCGCACTAGACATACAT 77 9097234 0.73005564 8 76 572 0.989361702 1.968482949 0.138297872 0.194805195 0.340425532 77 1 0 93 3L:9097225-9097275 6 CG13315 FBtr0340709|FBtr0076530 9097219|9097219 9097374|9097494 AGTTCC 6mer3-8 dme-miR-276a-3p 3L + 9097225 9097273 3'utr CG13315 FlyBase G21984.1 TAGTTTTAGTTCCGGCCTTGACATGTTCCTAATGTCGCACTAGACATAC 47 9097234 0.716352278 9 44 369 0.918918919 1.832508913 0.22972973 0.361702128 0.594594595 47 6 0 68 3L:9097225-9097273 6 54.5 2060 FBgn0040827 102.6933333 24.86 37.96 0.53070631 2.19227675 1.435721812 -2 -2 -2 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 9097398 9097403 + 3L_9097398_9097403_+ 0.654896007 0.841836704 0.748366356 0.132187037 CG13315 FBtr0076530 9097219 9097494 3L + 9097360 9097419 3'utr CG13315 FlyBase G29047.2 AATCGAATCTAAACGAAGCTGGCGCTACGACTTTTCATGTACCTTGGCATTATATATATA 145 9097397 0.833298411 10 139 1317 0.956790123 1.713210443 0.055555556 0.110344828 0.203703704 145 5 2 155 3L:9097360-9097419 6 CG13315 FBtr0076530 9097219 9097494 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 9097360 9097418 3'utr CG13315 FlyBase G21986.1 AATCGAATCTAAACGAAGCTGGCGCTACGACTTTTCATGTACCTTGGCATTATATATAT 78 9097397 0.840911965 8 73 679 0.946153846 2.089905111 0.023076923 0.474358974 0.684615385 78 7 0 123 3L:9097360-9097418 6 103 2061 FBgn0040827 102.6933333 24.86 37.96 1.002986237 4.143201931 2.713382508 1 1 1 0.2 dme-miR-283-5p 8mer-A1 TGATATTA 3L 9348311 9348318 + 3L_9348311_9348318_+ 0.586505043 0.586527414 0.586516228 1.58E-05 PGRP-LC FBtr0308349|FBtr0089492|FBtr0346814|FBtr0089491 9348174|9347217|9348174|9348174 9348336|9348336|9348336|9348336 3L + 9348291 9348330 3'utr PGRP-LC FlyBase G29076.1 ATTCGTTTAAAAAGAAAATGTGATATTAAATAAAACAAAA 80 9348316 0.667474309 7 73 446 0.914893617 1.33243846 0 0.1375 0.265957447 80 5 3 86 3L:9348291-9348330 8 PGRP-LC FBtr0089491|FBtr0346814|FBtr0089492|FBtr0308349 9348174|9348174|9347217|9348174 9348336|9348336|9348336|9348336 TGATATTA 8mer-A1 dme-miR-283-5p 3L + 9348291 9348332 3'utr PGRP-LC FlyBase G22004.1 ATTCGTTTAAAAAGAAAATGTGATATTAAATAAAACAAAATG 58 9348316 0.658098571 6 53 335 0.91954023 1.425968732 0.011494253 0.362068966 0.574712644 58 5 2 80 3L:9348291-9348332 8 68.5 2062 FBgn0035976 208.34 13.13 20.06 0.328789479 5.217060168 3.414755733 -5 -5 -5 0.2 dme-miR-92b-3p 6mer3-8 GTGCAA 3L 9359565 9359570 + 3L_9359565_9359570_+ 0.994578262 0.996344985 0.995461623 0.001249246 CG32039 FBtr0345605|FBtr0076441 9359489|9359489 9359996|9359747 3L + 9359541 9359602 3'utr CG32039 FlyBase G29083.1 GTTCCCACATCTTTACTGACTTTTGTGCAAAGTTTTTGTACTACTCCGTATTTGTATTTGTA 34 9359563 0.740841541 8 33 377 0.973684211 1.568201724 0.184210526 0.117647059 0.210526316 34 1 0 37 3L:9359541-9359602 6 CG32039 FBtr0076441|FBtr0345605 9359489|9359489 9359747|9359996 GTGCAA 6mer3-8 dme-miR-92b-3p 3L + 9359534 9359603 3'utr CG32039 FlyBase G22012.1 CAAATTTGTTCCCACATCTTTACTGACTTTTGTGCAAAGTTTTTGTACTACTCCGTATTTGTATTTGTAT 23 9359563 0.991557721 6 23 252 1 1.505149978 0.125 0.304347826 0.5 23 0 0 32 3L:9359534-9359603 6 23 2063 FBgn0052039 133.9666667 27.61666667 42.45333333 0.171684499 0.832830416 0.541771357 2 2 2 0.2 dme-bantam-3p 7mer-A1 GATCTCA 3L 9369143 9369149 + 3L_9369143_9369149_+ 0.427343663 0.661241739 0.544292701 0.165390862 CG4452 FBtr0333883 9369104 9370300 3L + 9369093 9369171 stop_codon CG4452 FlyBase G29090.1 AATAGCGGCGTGAATGCCGTAAGCGGAGCTGGATTGGATCTACCTGATAAGATCTCACGCGGAAATGGTGGTAATGGGA 19 9369139 0.974562639 6 16 96 0.826086957 0.977723605 0.52173913 0.210526316 0.347826087 19 3 1 19 3L:9369093-9369171 7 CG4452 FBtr0333883 9369104 9370300 GATCTCA 7mer-A1 dme-bantam-3p 3L + 9369116 9369178 3'utr CG4452 FlyBase G22019.1 CGGAGCTGGATTGGATCTACCTGATAAGATCTCACGCGGAAATGGTGGTAATGGGACCATTGC 15 9369139 0.925827438 9 14 78 0.958333333 1.361727836 0.25 0.4 0.625 15 1 0 23 3L:9369116-9369178 7 13 2064 FBgn0035981 206.7633333 15.1 22.93333333 0.062873817 0.860927152 0.566860465 4 4 4 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3L 9374893 9374899 + 3L_9374893_9374899_+ 0.32054335 0.40819732 0.364370335 0.061980738 Hsp67Bb FBtr0100655 9373443 9374964 3L + 9374874 9374920 3'utr Hsp67Bb FlyBase G29098.1 AAGTTAATTTTAAAACAATTGTGATTCGGTAGCCCGCAAGCCCAATA 140 9374892 0.700553342 9 128 965 0.910828025 1.456366033 0.286624204 0.107142857 0.203821656 140 10 4 143 3L:9374874-9374920 7 Hsp67Bb FBtr0100655 9373443 9374964 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 9374874 9374917 3'utr Hsp67Bb FlyBase G22024.1 AAGTTAATTTTAAAACAATTGTGATTCGGTAGCCCGCAAGCCCA 61 9374892 0.944811498 9 53 418 0.906976744 1.414973348 0.162790698 0.327868852 0.523255814 61 6 2 78 3L:9374874-9374917 7 100.5 2065 FBgn0001228 1.666666667 0.403333333 0.57 60.3 249.1735537 176.3157895 1 1 1 0.2 dme-miR-308-3p 8mer-m1 CTGTGATT 3L 9387233 9387240 - 3L_9387233_9387240_- 0.384298011 0.384506053 0.384402032 0.000147149 CG4080 FBtr0309506 9386825 9387784 3L - 9387145 9387359 3'utr CG4080 FlyBase G35644.1 ACTAAGTTGTCCATGCCAAAAAGCCCAAAAACCAACCAGAGACGGTAATTATTTAGTCCATGTGTAGGATGTGTTTTGTTTCTTAACTTCTAAGTCAAATGAAATTTTAAAAAATTGATCTGTGATTAAGCGTCATTGAATATACATACATAACGTGCATAAATGCAAGCAAAAACATATTGACAGCAGCCGCAGCCGTAGAAAATGCAGAAAAA 153 9387241 0.979650894 20 149 1026 0.973958333 2.271841607 0.052083333 0.215686275 0.375 153 5 0 187 3L:9387145-9387359 8 CG4080 FBtr0309506 9386825 9387784 CTGTGATT 8mer-m1 dme-miR-308-3p 3L - 9387185 9387255 3'utr CG4080 FlyBase G26958.1 TTTTAAAAAATTGATCTGTGATTAAGCGTCATTGAATATACATACATAACGTGCATAAATGCAAGCAAAAA 70 9387241 0.840737221 10 68 476 0.981481481 1.72427587 0.018518519 0.4 0.611111111 70 1 1 106 3L:9387185-9387255 8 84.5 2066 FBgn0035983 376.7 13.10666667 19.99333333 0.224316432 6.447100712 4.226408803 1 1 1 0.2 dme-bantam-3p 6mer3-8 TGATCT 3L 9387739 9387744 - 3L_9387739_9387744_- 0.993447929 0.99155799 0.992502959 0.001336361 CG4080 FBtr0309506 9386825 9387784 3L - 9387660 9387784 3'utr CG4080 FlyBase G35646.1 AATGGAGTATCCTGCCCAACTGATCTGATGTGATCCACTATGATCTGCGCGCTCTTTCTCCCCCCAATAAGCTCTGCTCTCTCAAGTATTCACCGCTGGTCGACGGAGACCCCGAGATCCACATA 95 9387726 0.980145537 20 89 626 0.948717949 1.744292983 0.213675214 0.178947368 0.333333333 95 5 1 111 3L:9387660-9387784 6 CG4080 FBtr0076494|FBtr0309506 9387507|9386825 9387784|9387784 TGATCT 6mer3-8 dme-bantam-3p 3L - 9387670 9387788 stop_codon CG4080 FlyBase G26961.1 GTGAAATGGAGTATCCTGCCCAACTGATCTGATGTGATCCACTATGATCTGCGCGCTCTTTCTCCCCCCAATAAGCTCTGCTCTCTCAAGTATTCACCGCTGGTCGACGGAGACCCCGA 76 9387727 0.977708638 15 70 489 0.922330097 1.67669361 0.174757282 0.289473684 0.475728155 76 7 1 95 3L:9387670-9387788 6 42.5 2067 FBgn0035983 376.7 13.10666667 19.99333333 0.112821874 3.242624619 2.12570857 -18 -17 -17.5 0.2 dme-bantam-3p 7mer-m8 TGATCTC 3L 9407489 9407495 - 3L_9407489_9407495_- 0.439666569 0.434697331 0.43718195 0.003513826 CG4022 FBtr0309089 9406177 9408212 3L - 9407467 9407567 3'utr CG4022 FlyBase G35671.2 ATATCCATATCCATATCCGTGCAAAAGTATTAAGAAACTTCGCAGATCCAAGAACCCTAACCCTGGATCGATTGATCTCCACGCTTTGAAGTTGAGGGGCA 285 9407496 0.984614598 8 271 2191 0.956140351 2.037426498 0.064327485 0.161403509 0.301169591 285 13 2 327 3L:9407467-9407567 7 CG4022 FBtr0309089 9406177 9408212 TGATCTC 7mer-m8 dme-bantam-3p 3L - 9407459 9407550 3'utr CG4022 FlyBase G26976.1 CGTGCAAAAGTATTAAGAAACTTCGCAGATCCAAGAACCCTAACCCTGGATCGATTGATCTCCACGCTTTGAAGTTGAGGGGCAGTGAAAAC 155 9407496 0.976225355 11 146 1116 0.931623932 2.338456494 0.068376068 0.367741935 0.581196581 155 16 0 218 3L:9407459-9407550 7 199.5 2068 FBgn0035986 448.2433333 14.32333333 21.92 0.445070758 13.92832209 9.101277372 1 1 1 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3L 9412348 9412354 + 3L_9412348_9412354_+ 0.523892484 0.515079586 0.519486035 0.006231661 CG3689 FBtr0076456 9412188 9413637 3L + 9412306 9412378 3'utr CG3689 FlyBase G29117.1 ATCGCAAAAGCTGGCGCAGGCGACTCCTTAGTTAGTTTTGATTCTAGTCCAATTGTACAACATGTCGAAAATC 82 9412347 0.975292757 6 79 809 0.972222222 2.021189299 0.5 0.256097561 0.435185185 82 3 0 105 3L:9412306-9412378 7 CG3689 FBtr0076456 9412188 9413637 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 9412317 9412421 3'utr CG3689 FlyBase G22034.1 TGGCGCAGGCGACTCCTTAGTTAGTTTTGATTCTAGTCCAATTGTACAACATGTCGAAAATCAAATTCAAATTGTATTTTTGCTCAGGACTGAGTGTTGGCATAT 68 9412347 0.970091217 10 65 662 0.979591837 1.982271233 0.428571429 0.382352941 0.571428571 68 2 0 96 3L:9412317-9412421 7 68.5 2069 FBgn0035987 792 73.75 112.5233333 0.086489899 0.928813559 0.608762627 1 1 1 0.2 dme-miR-1003-3p 7mer-A1 TGTGAGA 3L 9412500 9412506 + 3L_9412500_9412506_+ 0.629658072 0.670475774 0.650066923 0.028862472 CG3689 FBtr0076456 9412188 9413637 3L + 9412447 9412523 3'utr CG3689 FlyBase G29119.1 TCGAAATTCAAAGATTGTTCTTGTACTTAATTTTGTAAATATGTCGACATACTTGTGAGACTGAGCGCAGCAATGTT 85 9412501 0.965089625 8 80 584 0.946808511 1.949390007 0.308510638 0.094117647 0.180851064 85 5 0 89 3L:9412447-9412523 7 CG3689 FBtr0076456 9412188 9413637 TGTGAGA 7mer-A1 dme-miR-1003-3p 3L + 9412449 9412533 3'utr CG3689 FlyBase G22035.1 GAAATTCAAAGATTGTTCTTGTACTTAATTTTGTAAATATGTCGACATACTTGTGAGACTGAGCGCAGCAATGTTATCCTTCTAT 57 9412501 0.872860357 8 49 409 0.821917808 1.301029996 0.328767123 0.228070175 0.397260274 57 11 2 60 3L:9412449-9412533 7 58.5 2070 FBgn0035987 792 73.75 112.5233333 0.073863636 0.793220339 0.519892171 -1 -1 -1 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3L 9414949 9414955 - 3L_9414949_9414955_- 0.519406459 0.520389423 0.519897941 0.000695015 CG3967 FBtr0076480|FBtr0331584 9414836|9414836 9415286|9415286 3L - 9414915 9414974 3'utr CG3967 FlyBase G35677.1 ACGAAAATACCTGACAAATTGTGATTACAACATATATAACTTATCATTTAACATTTAACT 35 9414956 0.975144011 4 34 216 0.97826087 1.653212514 0.065217391 0.228571429 0.413043478 35 1 0 45 3L:9414915-9414974 7 CG3967 FBtr0076480|FBtr0331584 9414836|9414836 9415286|9415286 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 9414934 9414973 3'utr CG3967 FlyBase G26981.1 CGAAAATACCTGACAAATTGTGATTACAACATATATAACT 23 9414956 0.681656845 3 23 126 1 1.491361694 0.032258065 0.347826087 0.516129032 23 0 0 31 3L:9414934-9414973 7 28.5 2071 FBgn0035989 353.1 23.02 35.35666667 0.080713679 1.238053866 0.806071462 1 1 1 0.2 dme-miR-305-5p 7mer-A1 GTACAAA 3L 9415180 9415186 - 3L_9415180_9415186_- 0.565155533 0.536441155 0.550798344 0.020304076 CG3967 FBtr0076480|FBtr0331584 9414836|9414836 9415286|9415286 3L - 9415175 9415225 3'utr CG3967 FlyBase G35678.1 CGACACTAGATAAACTGATATATCAACTAAATAACCATTGTACAAAGCTTT 8 9415188 0.971316898 4 7 43 0.833333333 1 0 0.375 0.583333333 8 2 0 10 3L:9415175-9415225 7 CG3967 FBtr0076480|FBtr0331584 9414836|9414836 9415286|9415286 GTACAAA 7mer-A1 dme-miR-305-5p 3L - 9415148 9415197 3'utr CG3967 FlyBase G26982.1 AAATAACCATTGTACAAAGCTTTGATTTTAGCCAATTATTTATATTTTCG 11 9415188 0.973106305 3 11 73 1 1.204119983 0 0.272727273 0.5 11 0 0 16 3L:9415148-9415197 7 8.5 2072 FBgn0035989 353.1 23.02 35.35666667 0.024072501 0.369244136 0.240407278 2 2 2 0.2 dme-miR-8-3p 6mer2-7 AGTATT 3L 9424401 9424406 + 3L_9424401_9424406_+ 0.998706179 0.999000305 0.998853242 0.00020796 aay FBtr0076457 9424361 9424781 3L + 9424371 9424438 3'utr aay FlyBase G29129.1 TACGTAAGGCGGTGGGGGAGTGGCGAATTTAGTATTTGAAATCAACGTGTTATAGCTCGTAGTGATGC 14 9424407 0.973040404 7 12 101 0.9375 0.875061263 0.25 0.142857143 0.25 14 0 1 15 3L:9424371-9424438 6 aay FBtr0076457 9424361 9424781 AGTATT 6mer2-7 dme-miR-8-3p 3L + 9424370 9424454 3'utr aay FlyBase G22041.1 ATACGTAAGGCGGTGGGGGAGTGGCGAATTTAGTATTTGAAATCAACGTGTTATAGCTCGTAGTGATGCACATGTTTATGCCCAA 16 9424409 0.979943091 7 14 102 0.869565217 1.301029996 0.52173913 0.375 0.565217391 16 3 0 20 3L:9424370-9424454 6 7.5 2073 FBgn0023129 178.6666667 14.14 21.50666667 0.041977612 0.530410184 0.348729076 -6 -8 -7 0.2 dme-miR-8-3p 7mer-m8 CAGTATT 3L 9428632 9428638 + 3L_9428632_9428638_+ 0.661496996 0.61714997 0.639323483 0.031358064 Shc FBtr0076458 9428433 9428671 3L + 9428612 9428673 3'utr Shc FlyBase G29140.1 TACAAATATGTGCATGTCTACAGTATTTTCCATTCGAATGCGAATAAAGATGATAAACGGAA 21 9428639 0.991320174 5 19 195 0.916666667 1.342422681 0.208333333 0.142857143 0.25 21 2 0 22 3L:9428612-9428673 7 Shc FBtr0076458 9428433 9428671 CAGTATT 7mer-m8 dme-miR-8-3p 3L + 9428615 9428658 3'utr Shc FlyBase G22052.1 AAATATGTGCATGTCTACAGTATTTTCCATTCGAATGCGAATAA 22 9428639 0.693836988 4 20 193 0.911764706 1.491361694 0.205882353 0.409090909 0.617647059 22 3 0 31 3L:9428615-9428658 7 20 2074 FBgn0015296 548 41.97 64.36666667 0.03649635 0.476530855 0.310719834 -7 -7 -7 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 9438111 9438116 + 3L_9438111_9438116_+ 0.714431821 0.723355605 0.718893713 0.006310079 MTF-1 FBtr0113323|FBtr0113323|FBtr0113323|FBtr0344237|FBtr0344237|FBtr0344237|FBtr0113324|FBtr0113324|FBtr0113324|FBtr0113322|FBtr0113322|FBtr0113322|FBtr0076459|FBtr0076459|FBtr0076459|FBtr0076460|FBtr0076460|FBtr0076460 9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921 9438711|9438711|9438711|9438711|9438711|9438711|9438704|9438704|9438704|9438711|9438711|9438711|9438711|9438711|9438711|9438711|9438711|9438711 3L + 9438067 9438156 3'utr MTF-1 FlyBase G29149.1 ACAAAAAATATCAAAGTGCATTTAAGTGAAACGATTCAATCATATGTGATCCCAGCGGAGGCTGGCCGCGCTATCCCAAAACCTACTATA 83 9438109 0.876780308 15 61 459 0.739130435 1.355387658 0.195652174 0.096385542 0.184782609 83 22 2 68 3L:9438067-9438156 6 MTF-1 FBtr0076460|FBtr0076460|FBtr0076460|FBtr0076459|FBtr0076459|FBtr0076459|FBtr0113322|FBtr0113322|FBtr0113322|FBtr0113324|FBtr0113324|FBtr0113324|FBtr0344237|FBtr0344237|FBtr0344237|FBtr0113323|FBtr0113323|FBtr0113323 9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921 9438711|9438711|9438711|9438711|9438711|9438711|9438711|9438711|9438711|9438704|9438704|9438704|9438711|9438711|9438711|9438711|9438711|9438711 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 9438070 9438155 3'utr MTF-1 FlyBase G22058.1 AAAAATATCAAAGTGCATTTAAGTGAAACGATTCAATCATATGTGATCCCAGCGGAGGCTGGCCGCGCTATCCCAAAACCTACTAT 64 9438110 0.785474249 13 44 323 0.673076923 1.544068044 0.240384615 0.40625 0.634615385 64 33 1 70 3L:9438070-9438155 6 62 2075 FBgn0040305 420.6966667 14.72 22.57 0.147374593 4.211956522 2.747009304 2 1 1.5 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3L 9452604 9452610 + 3L_9452604_9452610_+ 0.65743565 0.809979299 0.733707475 0.107864685 ghi FBtr0076462 9452442 9452790 3L + 9452557 9452633 3'utr ghi FlyBase G29164.1 TATACACCGCAATCAATGAATGGAACGTAGCTGTAGGCGACACATGTCCAAAGAGGCGATCTAATCGCTTGCTGATC 10 9452574 0.938015005 6 10 41 1 1.041392685 0.363636364 0.1 0.181818182 10 0 0 11 3L:9452557-9452633 7 ghi FBtr0076462 9452442 9452790 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 9452572 9452620 3'utr ghi FlyBase G22070.1 ATGAATGGAACGTAGCTGTAGGCGACACATGTCCAAAGAGGCGATCTAA 7 9452601 0.923469352 4 6 21 1 1.113943352 0.307692308 0.714285714 0.846153846 7 0 0 13 3L:9452572-9452620 7 5 2076 FBgn0266124 200.3333333 37.04333333 56.53333333 0.024958403 0.134977054 0.088443396 30 3 16.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 9452758 9452763 + 3L_9452758_9452763_+ 0.904015831 0.925440032 0.914727932 0.015149197 ghi FBtr0076462|FBtr0076462|FBtr0076462 9452442|9452442|9452442 9452790|9452790|9452790 3L + 9452731 9452778 3'utr ghi FlyBase G29166.1 AATAAATCTAACGCTTACACAATCGCACTGTGAAATAGTTAAAAAAAG 17 9452766 0.711981419 5 14 86 0.884615385 1.361727836 0.192307692 0.352941176 0.576923077 17 3 0 23 3L:9452731-9452778 6 ghi FBtr0076462|FBtr0076462|FBtr0076462 9452442|9452442|9452442 9452790|9452790|9452790 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 9452637 9452774 3'utr ghi FlyBase G22071.1 ATCTGAAGTGGACAACACCCGGCGACTGTCCATCAATAGCTGCCTCACCGTTTAATGTAGTTATCTAGCAGTAGTTACAAGTTTAAAGTCAGTTAATAAATCTAACGCTTACACAATCGCACTGTGAAATAGTTAAAA 22 9452766 0.93214717 12 19 129 0.909090909 1.477121255 0.121212121 0.409090909 0.606060606 22 3 0 30 3L:9452637-9452774 6 12 2077 FBgn0266124 200.3333333 37.04333333 56.53333333 0.059900166 0.323944929 0.212264151 -8 -8 -8 0.2 dme-bantam-3p 6mer3-8 TGATCT 3L 9453120 9453125 - 3L_9453120_9453125_- 0.990651907 0.991889624 0.991270765 0.000875186 phol FBtr0076475|FBtr0345600 9453046|9452801 9453529|9453529 3L - 9453086 9453238 3'utr phol FlyBase G35697.1 AGTTCTAAGAGTTTAGCTTGTACCGTAGGCTAAGTGAGTCCCCCCGCAAAACCAAAACTGAACCGTAATCCCCGAAGAACTCAGCCAAACTGTCACCTTAAAAAGCCCCAATTTGATCTGATACTAATCGTGTGCGATCTTCGCTCGAATAAC 163 9453126 0.970284628 14 157 899 0.971014493 1.826074803 0.004830918 0.226993865 0.391304348 163 4 2 201 3L:9453086-9453238 6 phol FBtr0076475|FBtr0345600 9453046|9452801 9453529|9453529 TGATCT 6mer3-8 dme-bantam-3p 3L - 9453103 9453143 3'utr phol FlyBase G26995.1 CCTTAAAAAGCCCCAATTTGATCTGATACTAATCGTGTGCG 100 9453126 0.961073316 6 98 546 0.980645161 2.181843588 0.012903226 0.38 0.6 100 3 0 152 3L:9453103-9453143 6 121.5 2078 FBgn0035997 881.8933333 31.6 48.47 0.137771764 3.844936709 2.506705178 1 1 1 0.2 dme-miR-283-5p 7mer-m1 GATATTT 3L 9475735 9475741 - 3L_9475735_9475741_- 0.506039005 0.548736521 0.527387763 0.030191692 Uch-L5 FBtr0076472 9475491 9475793 3L - 9475723 9475810 stop_codon Uch-L5 FlyBase G35723.1 AAAAGGATACCGACTAAGCATTTACAGTATATATTTAAAATTTCCCGTTGGACAATTTAAAATTGCTGCGATATTTGAAATAAAAGAA 74 9475748 0.909836493 12 70 665 0.941860465 1.908485019 0.069767442 0.162162162 0.279069767 74 5 0 81 3L:9475723-9475810 7 Uch-L5 FBtr0076472 9475491 9475793 GATATTT 7mer-m1 dme-miR-283-5p 3L - 9475721 9475795 stop_codon Uch-L5 FlyBase G27011.1 AAGCATTTACAGTATATATTTAAAATTTCCCGTTGGACAATTTAAAATTGCTGCGATATTTGAAATAAAAGAAAA 47 9475748 0.990377203 7 42 443 0.911764706 1.315270435 0.058823529 0.361702128 0.558823529 47 4 2 62 3L:9475721-9475795 7 55.5 2079 FBgn0011327 635.3333333 61.73666667 94.22333333 0.087355719 0.898979537 0.589026073 7 7 7 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3L 9485714 9485720 + 3L_9485714_9485720_+ 0.441198211 0.443130843 0.442164527 0.001366555 Jarid2 FBtr0076468 9485591 9486530 3L + 9485696 9485767 3'utr Jarid2 FlyBase G29207.1 AAGAAATGTGTATACCTATGTGATTCGCCATCGCTAGTGAGCAGATAATTGATAATTGGGTGAAATATAGAA 41 9485720 0.735398812 9 40 294 0.981481481 1.72427587 0.148148148 0.219512195 0.407407407 41 1 0 53 3L:9485696-9485767 7 Jarid2 FBtr0076468 9485591 9486530 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 9485700 9485740 3'utr Jarid2 FlyBase G22094.1 AATGTGTATACCTATGTGATTCGCCATCGCTAGTGAGCAGA 25 9485719 0.861979896 6 24 168 0.96875 1.491361694 0.1875 0.2 0.375 25 1 0 31 3L:9485700-9485740 7 29.5 2080 FBgn0036004 1195.756667 17.17 26.52666667 0.024670571 1.718112988 1.112088464 -6 -5 -5.5 0.2 dme-miR-1012-3p 8mer-A1 TTGACTAA 3L 9485831 9485838 + 3L_9485831_9485838_+ 0.440041966 0.396418787 0.418230376 0.030846261 Jarid2 FBtr0076468 9485591 9486530 3L + 9485794 9485868 3'utr Jarid2 FlyBase G29208.1 ACAAAACACACATATTAATGCAACGTTTATCTCCCAGTTGACTAACTGACACTATTACTAACTGTAAGATAAGAG 16 9485831 0.962604106 8 15 102 0.954545455 1.021189299 0.318181818 0.3125 0.5 16 0 1 21 3L:9485794-9485868 8 Jarid2 FBtr0076468 9485591 9486530 TTGACTAA 8mer-A1 dme-miR-1012-3p 3L + 9485760 9485853 3'utr Jarid2 FlyBase G22095.1 ATATAGAAATGTCTACGAGTTAATCCATGGACACACAAAACACACATATTAATGCAACGTTTATCTCCCAGTTGACTAACTGACACTATTACTA 19 9485808 0.995888613 7 17 109 0.913043478 1.021189299 0 0.210526316 0.347826087 19 1 1 21 3L:9485760-9485853 8 9 2081 FBgn0036004 1195.756667 17.17 26.52666667 0.007526615 0.524170064 0.339281226 0 23 11.5 0.2 dme-miR-79-3p 7mer-m8 TAGCTTT 3L 9486099 9486105 + 3L_9486099_9486105_+ 0.439260341 0.593277076 0.516268709 0.108906324 Jarid2 FBtr0076468 9485591 9486530 3L + 9486056 9486179 3'utr Jarid2 FlyBase G29210.1 TATTGTATATAGAGAGCCTTAGTGTATGTACGTACTACGTAGTTAGCTTTCGAATTAAGTCAAAGACCCTCAAAGAAACCATGCTAACGTGTTGCAATTTCTACTACCTTTTATACGCTAAGAT 26 9486076 0.988620572 15 24 224 0.965517241 1.447158031 0.103448276 0.076923077 0.172413793 26 1 0 28 3L:9486056-9486179 7 Jarid2 FBtr0076468 9485591 9486530 TAGCTTT 7mer-m8 dme-miR-79-3p 3L + 9486061 9486115 3'utr Jarid2 FlyBase G22097.1 TATATAGAGAGCCTTAGTGTATGTACGTACTACGTAGTTAGCTTTCGAATTAAGT 11 9486074 0.986847544 6 10 95 0.928571429 1.113943352 0.142857143 0.272727273 0.428571429 11 1 0 13 3L:9486061-9486115 7 8.5 2082 FBgn0036004 1195.756667 17.17 26.52666667 0.00710847 0.495049505 0.320432269 23 25 24 0.2 dme-miR-965-3p 6mer3-8 TACGCT 3L 9486169 9486174 + 3L_9486169_9486174_+ 0.935046211 0.94523802 0.940142115 0.007206691 Jarid2 FBtr0076468 9485591 9486530 3L + 9486056 9486179 3'utr Jarid2 FlyBase G29210.1 TATTGTATATAGAGAGCCTTAGTGTATGTACGTACTACGTAGTTAGCTTTCGAATTAAGTCAAAGACCCTCAAAGAAACCATGCTAACGTGTTGCAATTTCTACTACCTTTTATACGCTAAGAT 26 9486166 0.988620572 15 24 224 0.965517241 1.447158031 0.103448276 0.076923077 0.172413793 26 1 0 28 3L:9486056-9486179 6 Jarid2 FBtr0076468 9485591 9486530 TACGCT 6mer3-8 dme-miR-965-3p 3L + 9486144 9486170 3'utr Jarid2 FlyBase G22098.1 GTGTTGCAATTTCTACTACCTTTTATA 6 9486166 0.677102956 2 6 59 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3L:9486144-9486170 2 5.5 2083 FBgn0036004 1195.756667 17.17 26.52666667 0.004599598 0.32032615 0.207338527 3 3 3 0.2 dme-miR-307a-3p 7mer-A1 GTTGTGA 3L 9486340 9486346 + 3L_9486340_9486346_+ 0.523166881 0.753922765 0.638544823 0.163169062 Jarid2 FBtr0076468 9485591 9486530 3L + 9486311 9486382 3'utr Jarid2 FlyBase G29211.1 GAAAGCCAGAGTTACTATCGCTGACTGAAGTTGTGAGGCGGGACAACCCAAGACGTACTGTTCATTCAACCA 7 9486342 0.93294359 5 7 29 1 0.903089987 0.5 0.142857143 0.25 7 0 0 8 3L:9486311-9486382 7 Jarid2 FBtr0076468 9485591 9486530 GTTGTGA 7mer-A1 dme-miR-307a-3p 3L + 9486317 9486362 3'utr Jarid2 FlyBase G22099.1 CAGAGTTACTATCGCTGACTGAAGTTGTGAGGCGGGACAACCCAAG 11 9486344 0.973219582 5 9 56 0.928571429 1.113943352 0.285714286 0.272727273 0.428571429 11 1 0 13 3L:9486317-9486362 7 8 2084 FBgn0036004 1195.756667 17.17 26.52666667 0.006690324 0.465928946 0.301583312 -2 -4 -3 0.2 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3L 9486489 9486495 - 3L_9486489_9486495_- 0.808726105 0.808640436 0.80868327 6.06E-05 pall FBtr0076471|FBtr0076471 9486446|9486446 9486622|9486622 3L - 9486448 9486554 3'utr pall FlyBase G35731.1 AGCATTAATTAGGCAGTGCATCTTCGATATATCGCGTTAAGATTTATTGTTGCACTTGTTACTTAAATATTGTATTACTACTATATAAATACATTGAACATCTAGTG 12 9486498 0.99437503 7 11 120 0.916666667 0.740362689 0.083333333 0 0 12 0 1 11 3L:9486448-9486554 7 pall FBtr0076471|FBtr0076471 9486446|9486446 9486622|9486622 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3L - 9486465 9486509 3'utr pall FlyBase G27015.1 ATTGTTGCACTTGTTACTTAAATATTGTATTACTACTATATAAAT 8 9486485 0.787775698 5 8 95 1 1.041392685 0 0.375 0.545454545 8 0 0 11 3L:9486465-9486509 7 7.5 2085 FBgn0036005 105.5133333 10.81333333 16.61 0.071081064 0.693588163 0.45153522 3 -10 -3.5 0.2 dme-miR-932-5p 6mer2-7 GAATTG 3L 9494988 9494993 - 3L_9494988_9494993_- 0.992094394 0.86851074 0.930302567 0.087386872 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 3L - 9494884 9495010 3'utr path FlyBase G35739.1 GAGTAATAAGTTACATTGAATTGCCCCGATATTCACTATGTGTAAACATACTTATTTTGTTGCATACATATTTTTGTATTTTAATTATAGCTATTAAAGAGAAATACTTAGCGAAACTATCAAGTAA 28 9494990 0.986577132 11 22 211 0.878787879 1.462397998 0.060606061 0.178571429 0.303030303 28 4 0 29 3L:9494884-9495010 6 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 GAATTG 6mer2-7 dme-miR-932-5p 3L - 9494974 9495005 3'utr path FlyBase G27021.1 ATAAGTTACATTGAATTGCCCCGATATTCACT 11 9494991 0.649993773 4 10 76 0.947368421 1.255272505 0.052631579 0.545454545 0.736842105 11 1 0 18 3L:9494974-9495005 6 13 2086 FBgn0036007 512.66 22.65333333 35.05666667 0.025357937 0.573866981 0.370828183 -3 -2 -2.5 0.2 dme-miR-276a-3p 6mer3-8 AGTTCC 3L 9495066 9495071 - 3L_9495066_9495071_- 0.985002216 0.967796728 0.976399472 0.012166126 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 3L - 9495044 9495088 3'utr path FlyBase G35740.1 CTATTTTGCAATCGATCAGTTCCAAATATGTTGAGCTAAATTACT 24 9495069 0.846063913 5 23 196 0.96 1.079181246 0.08 0.041666667 0.08 24 0 1 24 3L:9495044-9495088 6 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 AGTTCC 6mer3-8 dme-miR-276a-3p 3L - 9495052 9495086 3'utr path FlyBase G27022.1 ATTTTGCAATCGATCAGTTCCAAATATGTTGAGCT 14 9495069 0.853252409 2 11 93 0.85 0.929418926 0.2 0.357142857 0.55 14 2 1 17 3L:9495052-9495086 6 15 2087 FBgn0036007 512.66 22.65333333 35.05666667 0.029259158 0.662154208 0.427878673 -2 -2 -2 0.2 dme-miR-995-5p 6mer3-8 AATTCG 3L 9495160 9495165 - 3L_9495160_9495165_- 0.999758188 0.999207915 0.999483051 0.000389121 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 3L - 9495144 9495190 3'utr path FlyBase G35741.1 CCCACTTTTACTTTGTTCCGTGGCAAATTCGCGTGATTTGCGTACAT 40 9495177 0.586167386 14 35 338 0.875 1.62324929 0.104166667 0.15 0.291666667 40 6 0 42 3L:9495144-9495190 6 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 AATTCG 6mer3-8 dme-miR-995-5p 3L - 9495108 9495189 3'utr path FlyBase G27023.1 CCACTTTTACTTTGTTCCGTGGCAAATTCGCGTGATTTGCGTACATTATTTAACATTTTAGCATGTTTAGTAAGTAAGCGTA 36 9495177 0.681578625 15 33 360 0.905660377 1.681241237 0.188679245 0.361111111 0.566037736 36 5 0 48 3L:9495108-9495189 6 26 2088 FBgn0036007 512.66 22.65333333 35.05666667 0.050715874 1.147733961 0.741656366 12 12 12 0.2 dme-miR-282-5p 7mer-m8 AGAGGCT 3L 9495298 9495304 - 3L_9495298_9495304_- 0.631347958 0.631482795 0.631415376 9.53E-05 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 3L - 9495235 9495509 3'utr path FlyBase G35742.1 CTACCGAGCACCATTATGCCGTTTTAGCACGTTTTAGTACACTCGCGATTATATAATGTAGAGAGTAAGCTAGTTGATAGCCGTTCAGAAACACTTTTAGAACAGTTCTGAACGATTCAAGCGGCATTCAAACTGGAACTTTACTAAGTGCACTTTAATAGTTTCCTATTGATTTCCTATTAATACCATTTAGTATGGATCTGTAAGAGGCTTAGTTACGTACCATCCTCCAAAAATCCCCACCCTTTCCTCTCTGTTCTAAAATAGTATTACTC 153 9495297 0.925718003 52 145 1226 0.95212766 1.775731776 0.14893617 0.189542484 0.340425532 153 7 2 179 3L:9495235-9495509 7 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 AGAGGCT 7mer-m8 dme-miR-282-5p 3L - 9495290 9495353 3'utr path FlyBase G27024.2 AATAGTTTCCTATTGATTTCCTATTAATACCATTTAGTATGGATCTGTAAGAGGCTTAGTTACG 47 9495297 0.679395505 14 45 391 0.96875 1.792391689 0.078125 0.319148936 0.5 47 2 0 62 3L:9495290-9495353 7 42 2089 FBgn0036007 512.66 22.65333333 35.05666667 0.081925643 1.854031783 1.198060283 -7 -7 -7 0.2 dme-miR-34-5p 7mer-A1 ACTGCCA 3L 9507401 9507407 - 3L_9507401_9507407_- 0.659063771 0.679795066 0.669429418 0.014659243 CG3408 FBtr0076426|FBtr0333863 9506816|9506816 9507578|9507578 3L - 9507354 9507484 3'utr CG3408 FlyBase G35760.1 AATTCAAAATGAGATACGTGTTGACCACCTGAACGAGTTATACGACTGCTACTTTGATATACCATTATCTGTAATTTACTGCCATTTATTTTGATAGACACTAAGCCCACTACGTCCATTGAAGGGAGATT 98 9507435 0.804423284 23 93 690 0.947826087 2.037426498 0.295652174 0.153061224 0.27826087 98 6 0 109 3L:9507354-9507484 7 CG3408 FBtr0076426|FBtr0333863 9506816|9506816 9507578|9507578 ACTGCCA 7mer-A1 dme-miR-34-5p 3L - 9507354 9507484 3'utr CG3408 FlyBase G27043.1 AATTCAAAATGAGATACGTGTTGACCACCTGAACGAGTTATACGACTGCTACTTTGATATACCATTATCTGTAATTTACTGCCATTTATTTTGATAGACACTAAGCCCACTACGTCCATTGAAGGGAGATT 90 9507436 0.987277269 25 82 724 0.920863309 1.26211193 0.258992806 0.4 0.611510791 90 5 6 128 3L:9507354-9507484 7 26 2090 FBgn0036008 265.6766667 17.37666667 26.79 0.097863318 1.496259352 0.970511385 28 29 28.5 0.2 dme-miR-1002-5p 6mer3-8 CTACTT 3L 9507431 9507436 - 3L_9507431_9507436_- 0.456984082 0.506845956 0.481915019 0.035257688 CG3408 FBtr0076426|FBtr0333863 9506816|9506816 9507578|9507578 3L - 9507354 9507484 3'utr CG3408 FlyBase G35760.1 AATTCAAAATGAGATACGTGTTGACCACCTGAACGAGTTATACGACTGCTACTTTGATATACCATTATCTGTAATTTACTGCCATTTATTTTGATAGACACTAAGCCCACTACGTCCATTGAAGGGAGATT 98 9507435 0.804423284 23 93 690 0.947826087 2.037426498 0.295652174 0.153061224 0.27826087 98 6 0 109 3L:9507354-9507484 6 CG3408 FBtr0076426|FBtr0333863 9506816|9506816 9507578|9507578 CTACTT 6mer3-8 dme-miR-1002-5p 3L - 9507354 9507484 3'utr CG3408 FlyBase G27043.1 AATTCAAAATGAGATACGTGTTGACCACCTGAACGAGTTATACGACTGCTACTTTGATATACCATTATCTGTAATTTACTGCCATTTATTTTGATAGACACTAAGCCCACTACGTCCATTGAAGGGAGATT 90 9507436 0.987277269 25 82 724 0.920863309 1.26211193 0.258992806 0.4 0.611510791 90 5 6 128 3L:9507354-9507484 6 39.5 2091 FBgn0036008 265.6766667 17.37666667 26.79 0.148676963 2.273163246 1.474430758 -1 0 -0.5 0.2 dme-miR-14-3p 7mer-A1 AGACTGA 3L 9596485 9596491 + 3L_9596485_9596491_+ 0.821908345 0.822058406 0.821983376 0.000106137 CG42673 FBtr0302711 9595238 9596713 3L + 9596463 9596513 3'utr CG42673 FlyBase G29216.1 AATTTATGCAAAACGATTTTTGAGACTGAAACTGAAATTTGTACTAAGCAT 59 9596483 0.771565812 4 59 355 1 1.819543936 0.348484848 0.101694915 0.196969697 59 0 0 66 3L:9596463-9596513 7 CG42673 FBtr0302711 9595238 9596713 AGACTGA 7mer-A1 dme-miR-14-3p 3L + 9596463 9596500 3'utr CG42673 FlyBase G22103.1 AATTTATGCAAAACGATTTTTGAGACTGAAACTGAAAT 69 9596483 0.712520464 4 68 417 0.989010989 1.954242509 0.395604396 0.289855072 0.461538462 69 1 0 90 3L:9596463-9596500 7 63.5 2092 FBgn0261555 60.33333333 2.016666667 3.083333333 1.052486188 31.48760331 20.59459459 2 2 2 0.2 dme-miR-79-3p 7mer-A1 AGCTTTA 3L 9623600 9623606 + 3L_9623600_9623606_+ 0.820908898 0.818511992 0.819710445 0.001694864 LanB2 FBtr0076382|FBtr0345031 9623389|9623389 9623980|9623980 3L + 9623576 9623671 3'utr LanB2 FlyBase G29254.3 AAGGAGACCAACTGAGCAACGTTAAGCTTTAACGCATCATCGTTCGCCTACTGTATGCCATATACTATAATGATACAACGGATACAAGAGGATGGA 57 9623598 0.97239241 10 50 323 0.884057971 1.183269844 0.376811594 0.175438596 0.31884058 57 5 3 61 3L:9623576-9623671 7 LanB2 FBtr0345031|FBtr0076382 9623389|9623389 9623980|9623980 AGCTTTA 7mer-A1 dme-miR-79-3p 3L + 9623577 9623638 3'utr LanB2 FlyBase G22134.3 AGGAGACCAACTGAGCAACGTTAAGCTTTAACGCATCATCGTTCGCCTACTGTATGCCATAT 38 9623598 0.823802956 5 30 215 0.833333333 1.22184875 0.25 0.394736842 0.616666667 38 8 2 50 3L:9623577-9623638 7 38 2093 FBgn0267348 4568.76 93.89666667 143.73 0.008317355 0.404700202 0.26438461 2 2 2 0.2 dme-miR-305-3p 8mer-A1 ATGTGCCA 3L 9623890 9623897 + 3L_9623890_9623897_+ 0.513026282 0.611825167 0.562425724 0.069861372 LanB2 FBtr0076382|FBtr0345031 9623389|9623389 9623980|9623980 3L + 9623817 9623935 3'utr LanB2 FlyBase G29255.1 ATATCTCTACCGTAGCTCCACCTGAAGTCTATTCTAAACACTTATATATTAACATATTTGTCATCTACGTTTAATGTGCCAATACAATTACCATGTATCTTTGTGTATAAGTCGCTTAA 68 9623917 0.84241447 22 67 587 0.987654321 1.903089987 0.111111111 0.176470588 0.308641975 68 1 0 80 3L:9623817-9623935 8 LanB2 FBtr0345031|FBtr0076382 9623389|9623389 9623980|9623980 ATGTGCCA 8mer-A1 dme-miR-305-3p 3L + 9623862 9623932 3'utr LanB2 FlyBase G22138.1 ATATTAACATATTTGTCATCTACGTTTAATGTGCCAATACAATTACCATGTATCTTTGTGTATAAGTCGCT 13 9623917 0.98815038 7 12 118 0.95 1.278753601 0.1 0.384615385 0.6 13 1 0 19 3L:9623862-9623932 8 12.5 2094 FBgn0267348 4568.76 93.89666667 143.73 0.002735972 0.133125067 0.086968622 -27 -27 -27 0.2 dme-miR-33-5p 6mer3-8 CAATGC 3L 9716249 9716254 + 3L_9716249_9716254_+ 0.981474075 0.941590465 0.96153227 0.028201964 vsg FBtr0076399|FBtr0076400|FBtr0076398|FBtr0076401 9716221|9716221|9716221|9716221 9717716|9717716|9717716|9717716 3L + 9716196 9716339 stop_codon vsg FlyBase G29291.1 AACGAGCGCAACTACCACACCCTTTGAGCCGCCACCGCCTTTACGTCGGCCTTCAATGCGGCAGCCGGAGCTGCGGCGGCCAGCAGCAGTGCCGCATCCACGGATGCGGAGCGCGTGCGGTTTGTCCAGCCTTCGATACCGCTA 63 9716252 0.971479196 14 61 244 0.972972973 1.556302501 0.324324324 0.158730159 0.283783784 63 1 1 72 3L:9716196-9716339 6 vsg FBtr0076401|FBtr0076398|FBtr0076399|FBtr0076400 9716221|9716221|9716221|9716221 9717716|9717716|9717716|9717716 CAATGC 6mer3-8 dme-miR-33-5p 3L + 9716205 9716282 stop_codon vsg FlyBase G22165.1 AACTACCACACCCTTTGAGCCGCCACCGCCTTTACGTCGGCCTTCAATGCGGCAGCCGGAGCTGCGGCGGCCAGCAGC 19 9716252 0.980689344 5 19 61 1 1.414973348 0.423076923 0.315789474 0.5 19 0 0 26 3L:9716205-9716282 6 17.5 2095 FBgn0045823 8137.983333 435.5866667 668.4 0.00215041 0.040175702 0.026181927 -3 -3 -3 0.2 dme-miR-1003-3p 8mer-A1 ATGTGAGA 3L 9716931 9716938 + 3L_9716931_9716938_+ 0.557470342 0.481638415 0.519554379 0.053621251 vsg FBtr0076399|FBtr0076400|FBtr0330097|FBtr0076398|FBtr0076401 9716221|9716221|9716461|9716221|9716221 9717716|9717716|9717716|9717716|9717716 3L + 9716840 9716964 3'utr vsg FlyBase G29295.1 AGGGTCTTCCCAGGGCGACCATGAACCGAGAAATGAGTTATGAGATCGAAACGAAACGAGACGAGAGGAGTAAGAACAAATAACAGCAAATATGTGAGACTGCTTGATAGCGAGAAAGTGAAGAG 573 9716934 0.909584948 12 550 3109 0.96257485 1.853968463 0.359281437 0.144851658 0.266467066 573 17 8 643 3L:9716840-9716964 8 vsg FBtr0076401|FBtr0330097|FBtr0076398|FBtr0076399|FBtr0076400 9716221|9716461|9716221|9716221|9716221 9717716|9717716|9717716|9717716|9717716 ATGTGAGA 8mer-A1 dme-miR-1003-3p 3L + 9716821 9716968 3'utr vsg FlyBase G22170.1 AGTCCGGGGAGCCTGTCACAGGGTCTTCCCAGGGCGACCATGAACCGAGAAATGAGTTATGAGATCGAAACGAAACGAGACGAGAGGAGTAAGAACAAATAACAGCAAATATGTGAGACTGCTTGATAGCGAGAAAGTGAAGAGATCA 526 9716934 0.968363719 13 512 2794 0.974452555 2.301572525 0.412408759 0.418250951 0.627737226 526 18 3 801 3L:9716821-9716968 8 500.5 2096 FBgn0045823 8137.983333 435.5866667 668.4 0.061501723 1.14902507 0.748803112 -3 -3 -3 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 9721102 9721108 - 3L_9721102_9721108_- 0.67040619 0.628171879 0.649289034 0.02986416 nbs FBtr0306041|FBtr0306041|FBtr0306041 9720412|9720412|9720412 9722003|9722003|9722003 3L - 9721089 9721133 5'utr nbs FlyBase G35833.1 GCTAAACGAAAGCGACAGCGATGATTGTGATAATCTTTTTAACTT 40 9721110 0.982852556 2 36 276 0.934782609 1.33243846 0.152173913 0.153846154 0.282608696 39 2 1 43 3L:9721089-9721133 7 nbs FBtr0306041|FBtr0306041|FBtr0306041 9720412|9720412|9720412 9722003|9722003|9722003 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 9721084 9721129 5'utr nbs FlyBase G27102.1 AACGAAAGCGACAGCGATGATTGTGATAATCTTTTTAACTTTGCAG 33 9721109 0.984256654 6 29 231 0.914893617 1.633468456 0.191489362 0.393939394 0.574468085 33 4 0 43 3L:9721084-9721129 7 35.5 2097 FBgn0261530 423 19.85333333 30.51333333 0.08392435 1.788112827 1.163425825 2 1 1.5 0.2 dme-miR-932-5p 6mer3-8 GGAATT 3L 9729294 9729299 + 3L_9729294_9729299_+ 0.913819291 0.905737278 0.909778284 0.005714837 Naa60 FBtr0089410|FBtr0089411 9728844|9728844 9729650|9729650 3L + 9729215 9729309 3'utr Naa60 FlyBase G29317.1 AAAAGATATCTATCTGTTCACTACTGCTGTAAATAGTCTTATGATGTTTTGTTTGAATCGAGCTGTAACCGAGTGATTTGGAATTAGCATAGCCC 27 9729292 0.755131322 8 25 202 0.96875 1.491361694 0.5 0.148148148 0.28125 27 1 0 31 3L:9729215-9729309 6 Naa60 FBtr0089411|FBtr0089410 9728844|9728844 9729650|9729650 GGAATT 6mer3-8 dme-miR-932-5p 3L + 9729265 9729302 3'utr Naa60 FlyBase G22185.1 GTTTGAATCGAGCTGTAACCGAGTGATTTGGAATTAGC 10 9729292 0.961810727 3 10 57 1 1.278753601 0.157894737 0.5 0.736842105 10 0 0 19 3L:9729265-9729302 6 12.5 2098 FBgn0036039 253.3733333 14.26 21.89 0.049334316 0.87657784 0.571037003 2 2 2 0.2 dme-miR-305-5p 7mer-A1 GTACAAA 3L 9839158 9839164 - 3L_9839158_9839164_- 0.759050065 0.757239256 0.75814466 0.001280429 RasGAP1 FBtr0076368 9839091 9840561 3L - 9839145 9839187 3'utr RasGAP1 FlyBase G35847.1 CATGCCTAGCTGATAAGTTGTTGGTACAAAGAATCGAAAATAA 72 9839166 0.717684998 6 63 499 0.87804878 1.556302501 0.146341463 0.125 0.231707317 72 9 1 72 3L:9839145-9839187 7 RasGAP1 FBtr0076368 9839091 9840561 GTACAAA 7mer-A1 dme-miR-305-5p 3L - 9839096 9839189 3'utr RasGAP1 FlyBase G27116.1 ACCATGCCTAGCTGATAAGTTGTTGGTACAAAGAATCGAAAATAAAAACATAGATATTTTCCAAGGGAAAAATAAAGCGTATCGCCAATGGATA 85 9839166 0.980065407 8 79 551 0.952 1.598425707 0.192 0.364705882 0.568 85 4 2 119 3L:9839096-9839189 7 75.5 2099 FBgn0004390 1606.046667 35.75666667 55.00333333 0.047009842 2.11149436 1.372644082 2 2 2 0.2 dme-miR-277-3p 7mer-m8 TGCATTT 3L 9839216 9839222 - 3L_9839216_9839222_- 0.619175881 0.620189892 0.619682886 0.000717006 RasGAP1 FBtr0076368 9839091 9840561 3L - 9839201 9839265 3'utr RasGAP1 FlyBase G35848.1 TGTTTGGAGTTTCCAACGTGGTTCATATACATATAATTTCACTTGCATTTTAAGGACACAATTAT 8 9839224 0.986844698 6 8 69 1 1 0.2 0.25 0.4 8 0 0 10 3L:9839201-9839265 7 RasGAP1 FBtr0076368 9839091 9840561 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 9839203 9839230 3'utr RasGAP1 FlyBase G27117.1 ATTTCACTTGCATTTTAAGGACACAATT 5 9839216 0.97312014 4 5 37 1 0.698970004 0 0 0 5 0 0 5 3L:9839203-9839230 7 4.5 2100 FBgn0004390 1606.046667 35.75666667 55.00333333 0.002801911 0.125850657 0.081813223 2 -6 -2 0.2 dme-miR-7-5p 7mer-m8 GTCTTCC 3L 9839410 9839416 - 3L_9839410_9839416_- 0.692091621 0.705001908 0.698546764 0.009128961 RasGAP1 FBtr0076368 9839091 9840561 3L - 9839357 9839436 3'utr RasGAP1 FlyBase G35849.1 CATCAATCGCATTGAAAAGTGTCTTCCTTCGCCGCGTTCAATCATATTGCCTTTTGTTTATGCATTCCAATCCAATAATT 16 9839417 0.989993035 4 14 134 0.882352941 0.875061263 0.117647059 0.0625 0.117647059 16 1 1 15 3L:9839357-9839436 7 RasGAP1 FBtr0076368 9839091 9840561 GTCTTCC 7mer-m8 dme-miR-7-5p 3L - 9839397 9839432 3'utr RasGAP1 FlyBase G27118.1 AATCGCATTGAAAAGTGTCTTCCTTCGCCGCGTTCA 16 9839417 0.775990243 3 16 117 1 1.477121255 0.1 0.75 0.866666667 16 0 0 30 3L:9839397-9839432 7 14 2101 FBgn0004390 1606.046667 35.75666667 55.00333333 0.008717057 0.391535378 0.254530028 1 1 1 0.2 dme-miR-278-3p 7mer-A1 CCACCGA 3L 9839535 9839541 - 3L_9839535_9839541_- 0.816506126 0.816084418 0.816295272 0.000298187 RasGAP1 FBtr0076368 9839091 9840561 3L - 9839500 9839565 3'utr RasGAP1 FlyBase G35850.1 GATTTGGTTAGCTTCGACTTACTTCCACCGATTTGTTTCCAAAGCTCTTCCATATTAATTACACAT 37 9839543 0.782668924 11 37 302 1 1.69019608 0.081632653 0.243243243 0.428571429 37 0 0 49 3L:9839500-9839565 7 RasGAP1 FBtr0076368 9839091 9840561 CCACCGA 7mer-A1 dme-miR-278-3p 3L - 9839510 9839560 3'utr RasGAP1 FlyBase G27119.1 GGTTAGCTTCGACTTACTTCCACCGATTTGTTTCCAAAGCTCTTCCATATT 17 9839543 0.98754403 4 16 144 0.925925926 1.397940009 0.037037037 0.470588235 0.666666667 17 2 0 25 3L:9839510-9839560 7 24.5 2102 FBgn0004390 1606.046667 35.75666667 55.00333333 0.015254849 0.685186912 0.44542755 2 2 2 0.2 dme-miR-252-5p 6mer3-8 GTACTT 3L 9860626 9860631 - 3L_9860626_9860631_- 0.999426423 0.581096221 0.790261322 0.295804121 iPLA2-VIA FBtr0076363|FBtr0076362|FBtr0076364|FBtr0076365 9860215|9860215|9860215|9860215 9860704|9860704|9860704|9860704 3L - 9860593 9860688 3'utr iPLA2-VIA FlyBase G35881.1 AGACCGCATTTGCTGTAGAGATCTCTCATTCGAGGGATCCTTTCGATTCATGTCCGTGTACTTTAGACTCGTTTAACCCTCTTCGTTTTTATTAAG 35 9860627 0.746402216 12 33 318 0.95 1.579783597 0.35 0.114285714 0.225 35 2 0 38 3L:9860593-9860688 6 iPLA2-VIA FBtr0076365|FBtr0076364|FBtr0076362|FBtr0076363 9860215|9860215|9860215|9860215 9860704|9860704|9860704|9860704 GTACTT 6mer3-8 dme-miR-252-5p 3L - 9860606 9860688 3'utr iPLA2-VIA FlyBase G27145.1 AGACCGCATTTGCTGTAGAGATCTCTCATTCGAGGGATCCTTTCGATTCATGTCCGTGTACTTTAGACTCGTTTAACCCTCTT 27 9860626 0.764961691 11 26 239 0.975 1.290034611 0.125 0.296296296 0.525 27 0 1 39 3L:9860606-9860688 6 20.5 2103 FBgn0036053 1579.763333 56.89333333 87.11666667 0.012976627 0.360323412 0.235316625 -4 -5 -4.5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 3L 9892397 9892402 + 3L_9892397_9892402_+ 0.960709291 0.984878718 0.972794005 0.017090347 CalpB FBtr0076343|FBtr0304675 9892344|9892344 9893319|9893011 3L + 9892355 9892415 3'utr CalpB FlyBase G29359.1 AATTGCTACTAATCTAATCCTAAGTGCGACGTATACTTAATCTACCTGTGCATCATATTAT 90 9892403 0.911279172 10 87 716 0.973684211 2.045322979 0.00877193 0.211111111 0.377192982 90 3 0 111 3L:9892355-9892415 6 CalpB FBtr0304675|FBtr0076343 9892344|9892344 9893011|9893319 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 3L + 9892373 9892424 3'utr CalpB FlyBase G22210.1 CCTAAGTGCGACGTATACTTAATCTACCTGTGCATCATATTATTCATGCATT 44 9892403 0.851781486 8 43 353 0.985915493 1.84509804 0.014084507 0.477272727 0.676056338 44 1 0 70 3L:9892373-9892424 6 64.5 2104 FBgn0025866 591.89 16.56333333 25.20333333 0.108972951 3.894143691 2.559185293 -6 -6 -6 0.2 dme-miR-282-5p 7mer-m8 AGAGGCT 3L 9893175 9893181 + 3L_9893175_9893181_+ 0.631524565 0.631524277 0.631524421 2.12E-07 CalpB FBtr0076343 9892344 9893319 3L + 9893160 9893188 3'utr CalpB FlyBase G29363.1 TAACCAATCGGGTTTAGAGGCTCTTTTTG 5 9893174 0.641428468 3 4 43 0.888888889 0.903089987 0.222222222 0.6 0.777777778 5 1 0 8 3L:9893160-9893188 7 CalpB FBtr0076343 9892344 9893319 AGAGGCT 7mer-m8 dme-miR-282-5p 3L + 9893154 9893188 3'utr CalpB FlyBase G22213.1 TGAAATTAACCAATCGGGTTTAGAGGCTCTTTTTG 8 9893174 0.980765952 4 8 64 1 1 0.6 0.125 0.3 8 0 0 10 3L:9893154-9893188 7 6 2105 FBgn0025866 591.89 16.56333333 25.20333333 0.010137019 0.362245925 0.238063748 1 1 1 0.2 dme-miR-283-5p 8mer-A1 TGATATTA 3L 9895667 9895674 - 3L_9895667_9895674_- 0.592160109 0.59170911 0.59193461 0.000318905 CG6707 FBtr0076356|FBtr0076358|FBtr0076357 9894805|9894805|9894805 9895759|9895759|9895759 3L - 9895656 9895736 3'utr CG6707 FlyBase G35913.1 AAGGAAGAAAGTGCATTGTTTTATTTTTATATATATATATTATTCATATATATCATTCCTTTTGATATTAAATTTAAAACT 17 9895675 0.963762983 10 16 186 0.95 1.278753601 0.1 0.176470588 0.3 17 1 0 19 3L:9895656-9895736 8 CG6707 FBtr0076357|FBtr0076356|FBtr0076358 9894805|9894805|9894805 9895759|9895759|9895759 TGATATTA 8mer-A1 dme-miR-283-5p 3L - 9895658 9895691 3'utr CG6707 FlyBase G27171.1 ATATATATCATTCCTTTTGATATTAAATTTAAAA 5 9895676 0.918878124 3 5 56 1 0.84509804 0 0.4 0.571428571 5 0 0 7 3L:9895658-9895691 8 7.5 2106 FBgn0036058 1005.72 59.74 91.51 0.007457344 0.125544024 0.081958256 1 2 1.5 0.2 dme-miR-283-5p 7mer-A1 GATATTA 3L 9902465 9902471 + 3L_9902465_9902471_+ 0.782911541 0.782793428 0.782852484 8.35E-05 nudE FBtr0345694|FBtr0076344|FBtr0113158|FBtr0345695 9902278|9902337|9902278|9902278 9902965|9902965|9902965|9903031 3L + 9902430 9902531 3'utr nudE FlyBase G29378.1 ATTTGAACTAAAATGACTTTGTATAAACCACTTGCGATATTATGAATTACACAACAGTTGATGTTGTTGTTTCGAGCCCAACATATATAACATGCCTTAGTA 108 9902461 0.98142893 16 106 772 0.985185185 1.822821645 0.081481481 0.231481481 0.385185185 108 1 1 133 3L:9902430-9902531 7 nudE FBtr0345694|FBtr0076344|FBtr0113158|FBtr0345695 9902278|9902337|9902278|9902278 9902965|9902965|9902965|9903031 GATATTA 7mer-A1 dme-miR-283-5p 3L + 9902400 9902481 3'utr nudE FlyBase G22228.1 ATTAATTAAGTTTCTGCTGCCTCTTTATTTATTTGAACTAAAATGACTTTGTATAAACCACTTGCGATATTATGAATTACAC 87 9902449 0.831453804 11 86 641 0.992125984 1.799340549 0.007874016 0.344827586 0.551181102 87 0 1 126 3L:9902400-9902481 7 46.5 2107 FBgn0036059 1404.16 85.35333333 130.67 0.033115884 0.544794189 0.355858269 4 16 10 0.2 dme-miR-277-3p 7mer-A1 GCATTTA 3L 9970794 9970800 + 3L_9970794_9970800_+ 0.467686137 0.554414875 0.511050506 0.061326523 Dronc FBtr0076347 9970748 9971002 3L + 9970739 9970856 stop_codon Dronc FlyBase G29393.1 TCAACGAATAGTTGCCGCCACTGGACATTTTATCATTCCGGATGCATTTTTAACCGCATTTATGTTCTTATCGTCGCATTTAGTATGTCTTTTAGATTATGTGTTCTGTGCTCGCGTG 44 9970806 0.989297246 14 41 399 0.936170213 1.643452676 0.14893617 0.045454545 0.106382979 44 3 0 44 3L:9970739-9970856 7 Dronc FBtr0076347 9970748 9971002 GCATTTA 7mer-A1 dme-miR-277-3p 3L + 9970732 9970823 stop_codon Dronc FlyBase G22242.1 GGGTTTTTCAACGAATAGTTGCCGCCACTGGACATTTTATCATTCCGGATGCATTTTTAACCGCATTTATGTTCTTATCGTCGCATTTAGTA 22 9970787 0.989524333 11 20 192 0.9375 1.477121255 0.15625 0.409090909 0.59375 22 2 0 30 3L:9970732-9970823 7 21.5 2108 FBgn0026404 332.5566667 20.05666667 30.72333333 0.064650636 1.071962772 0.699793859 -12 7 -2.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 9970951 9970957 + 3L_9970951_9970957_+ 0.751897444 0.752535982 0.752216713 0.000451558 Dronc FBtr0076347|FBtr0076347|FBtr0076347 9970748|9970748|9970748 9971002|9971002|9971002 3L + 9970935 9970974 3'utr Dronc FlyBase G29394.1 GAAATTATGTAATTTATGTGATAACTGCCAGAAATCTACA 35 9970948 0.642870553 6 31 267 0.87804878 1.255272505 0.414634146 0.142857143 0.268292683 35 4 1 36 3L:9970935-9970974 7 Dronc FBtr0076347|FBtr0076347|FBtr0076347 9970748|9970748|9970748 9971002|9971002|9971002 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 9970928 9970971 3'utr Dronc FlyBase G22243.1 AAGGTACGAAATTATGTAATTTATGTGATAACTGCCAGAAATCT 22 9970948 0.899930366 5 21 183 0.962962963 1.414973348 0.333333333 0.227272727 0.37037037 22 1 0 26 3L:9970928-9970971 7 28.5 2109 FBgn0026404 332.5566667 20.05666667 30.72333333 0.08569968 1.420973907 0.92763372 3 3 3 0.2 dme-miR-184-3p 6mer3-8 TCCGTC 3L 997929 997934 - 3L_997929_997934_- 0.978129233 0.97599818 0.977063706 0.001506845 trio FBtr0072646|FBtr0072645|FBtr0072649|FBtr0072648|FBtr0072647|FBtr0072644 995980|995980|997208|995980|995980|995980 998084|998084|998084|998084|998084|998084 3L - 997891 997959 3'utr trio FlyBase G33174.1 TGAGCATTAGCCTCGCACTTGTTTTTCCGTCTGTGCGTTTGTTTACGGATAGTTTTGCTCACTCACACC 79 997935 0.77147714 7 76 972 0.965517241 1.924279286 0.057471264 0.088607595 0.172413793 79 3 0 84 3L:997891-997959 6 trio FBtr0072647|FBtr0072644|FBtr0072646|FBtr0072645|FBtr0072649|FBtr0072648 995980|995980|995980|995980|997208|995980 998084|998084|998084|998084|998084|998084 TCCGTC 6mer3-8 dme-miR-184-3p 3L - 997837 997961 3'utr trio FlyBase G25102.1 AGTGAGCATTAGCCTCGCACTTGTTTTTCCGTCTGTGCGTTTGTTTACGGATAGTTTTGCTCACTCACACCCAGAAACACTCGCATACTCAATCCTAATTTGTATGTAACTTGTAATTGTAATTT 65 997935 0.987691095 10 64 769 0.97 1.986771734 0.09 0.369230769 0.59 65 3 0 97 3L:997837-997961 6 64.5 2110 FBgn0024277 3958.67 117.21 180.3966667 0.016293351 0.550294343 0.357545409 1 1 1 0.2 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 10002284 10002289 - 3R_10002284_10002289_- 0.6823518 0.743272421 0.71281211 0.043077369 Mical FBtr0347211|FBtr0082207|FBtr0347214|FBtr0347212|FBtr0082213|FBtr0082212|FBtr0082208|FBtr0082209|FBtr0306608|FBtr0347213|FBtr0082210|FBtr0306609 10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552 10009621|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434 3R - 10002262 10002302 3'utr Mical FlyBase G49745.1 ACTAAAACCCGTGAGCTGTAACCGAAACGAGCAACTAACTA 22 10002291 0.895274207 3 22 58 1 1.477121255 0 0.272727273 0.466666667 22 0 0 30 3R:10002262-10002302 6 Mical FBtr0306609|FBtr0306608|FBtr0347213|FBtr0082210|FBtr0082209|FBtr0082208|FBtr0082212|FBtr0082213|FBtr0347212|FBtr0347214|FBtr0082207|FBtr0347211 10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552 10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10009621 AGCTGT 6mer3-8 dme-miR-1008-3p 3R - 10002269 10002356 3'utr Mical FlyBase G37603.1 AGGGAACAGGGGAGAGCGTACCAAAAAGGCAGCTGAATATACAGAATTAACAATACTAAAACCCGTGAGCTGTAACCGAAACGAGCAA 29 10002291 0.900392162 6 27 72 0.953488372 1.612783857 0.162790698 0.413793103 0.604651163 29 2 0 41 3R:10002269-10002356 6 19.5 2111 FBgn0053208 877.6666667 10.30333333 15.81666667 0.022218002 1.892591394 1.232876712 2 2 2 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 10047344 10047350 - 3R_10047344_10047350_- 0.554033511 0.619274098 0.586653805 0.046132071 CG12811 FBtr0082204 10047250 10047380 3R - 10047320 10047374 3'utr CG12811 FlyBase G49764.1 TTAACATTATGTGCTTAAATGTATTGTGTTCTGTTTGGTAATGTGTGGAGGCCAG 13 10047351 0.949943185 4 13 154 1 1.146128036 0.428571429 0.076923077 0.142857143 13 0 0 14 3R:10047320-10047374 7 CG12811 FBtr0082204 10047250 10047380 TGTGTTC 7mer-m8 dme-miR-317-3p 3R - 10047308 10047373 3'utr CG12811 FlyBase G37619.1 TAACATTATGTGCTTAAATGTATTGTGTTCTGTTTGGTAATGTGTGGAGGCCAGTGAAGAATAGCG 10 10047351 0.991319331 4 10 102 1 1.079181246 0.5 0.2 0.333333333 10 0 0 12 3R:10047308-10047373 7 8.5 2112 FBgn0037779 320.7766667 40.53 62.69666667 0.026498187 0.209721194 0.135573396 1 1 1 0.2 dme-miR-283-5p 8mer-m1 TGATATTT 3R 10051478 10051485 + 3R_10051478_10051485_+ 0.554159418 0.555593182 0.5548763 0.00101385 CG3925 FBtr0082174 10051320 10051527 3R + 10051414 10051502 3'utr CG3925 FlyBase G41687.1 ATTCGTTTCACAACTACTTTTAGCAAAAACACACGGCGTTTGATGGCGTGGATGTAAACCTAATTGATATTTACGATTATTTGAATAAT 22 10051477 0.984328457 11 20 163 0.92 0.884606581 0.32 0.136363636 0.24 22 0 2 23 3R:10051414-10051502 8 CG3925 FBtr0082174 10051320 10051527 TGATATTT 8mer-m1 dme-miR-283-5p 3R + 10051413 10051489 3'utr CG3925 FlyBase G31461.1 AATTCGTTTCACAACTACTTTTAGCAAAAACACACGGCGTTTGATGGCGTGGATGTAAACCTAATTGATATTTACGA 16 10051477 0.982135605 8 15 114 0.961538462 1.397940009 0.230769231 0.4375 0.653846154 16 1 0 25 3R:10051413-10051489 8 9.5 2113 FBgn0037780 153.6666667 8.94 13.53666667 0.061822126 1.062639821 0.701797587 1 1 1 0.2 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 10073728 10073733 + 3R_10073728_10073733_+ 0.946586051 0.934985023 0.940785537 0.008203216 nerfin-2 FBtr0082177 10073452 10073761 3R + 10073668 10073749 stop_codon nerfin-2 FlyBase G41691.1 AGTCCGGCGGAAATGTTATCATGTGACTTAACAACTATTAGCAGCATTGAATCAACGATCTCTAGTTAAAGTTTAATAAATC 73 10073731 0.91463315 12 70 522 0.965909091 1.929418926 0.056818182 0.150684932 0.295454545 73 3 0 85 3R:10073668-10073749 6 nerfin-2 FBtr0082177 10073452 10073761 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 10073662 10073744 stop_codon nerfin-2 FlyBase G31463.1 CTGCAGAGTCCGGCGGAAATGTTATCATGTGACTTAACAACTATTAGCAGCATTGAATCAACGATCTCTAGTTAAAGTTTAAT 49 10073730 0.981557683 12 47 346 0.970149254 1.511883361 0.044776119 0.265306122 0.462686567 49 1 1 65 3R:10073662-10073744 6 36 2114 FBgn0041105 0.666666667 0.036666667 0.056666667 54 981.8181818 635.2941176 -3 -2 -2.5 0.2 dme-miR-305-3p 6mer3-8 ATGTGC 3R 10101533 10101538 - 3R_10101533_10101538_- 0.714234893 0.939510166 0.82687253 0.159293692 Fmr1 FBtr0082200|FBtr0082198|FBtr0308123 10101418|10101418|10101418 10103231|10103231|10103231 3R - 10101487 10101562 3'utr Fmr1 FlyBase G49770.1 AATAATATAAATATAATGAGAAAAATGTGCGATTTAAATTTATTATTTATATAAAGATGAACTTATAAAGAATAGA 26 10101537 0.981745345 4 26 190 1 1.462397998 0.655172414 0.115384615 0.206896552 26 0 0 29 3R:10101487-10101562 6 Fmr1 FBtr0308123|FBtr0082200|FBtr0082198 10101418|10101418|10101418 10103231|10103231|10103231 ATGTGC 6mer3-8 dme-miR-305-3p 3R - 10101510 10101547 3'utr Fmr1 FlyBase G37623.1 ATGAGAAAAATGTGCGATTTAAATTTATTATTTATATA 26 10101537 0.932913922 3 26 171 1 1.579783597 0.736842105 0.346153846 0.552631579 26 0 0 38 3R:10101510-10101547 6 25 2115 FBgn0028734 4744.61 148.7233333 229.5766667 0.005269137 0.168097362 0.108896084 -1 -1 -1 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 3R 10119215 10119222 + 3R_10119215_10119222_+ 0.630137081 0.639199034 0.634668058 0.006407731 CG3940 FBtr0344391|FBtr0082179|FBtr0344392 10119168|10119168|10119168 10119424|10119424|10120081 3R + 10119169 10119257 3'utr CG3940 FlyBase G41707.1 GATTTGAGATGGACAACTTGAAGGGAGCAGCCAATGACATACTCGTACCAAAGAATCGTTTAAGACAACGAATTTGTTTACCAACTATT 157 10119214 0.896310599 13 153 718 0.978609626 1.961421094 0.28342246 0.146496815 0.28342246 157 3 1 183 3R:10119169-10119257 8 CG3940 FBtr0082179|FBtr0344392|FBtr0344391 10119168|10119168|10119168 10119424|10120081|10119424 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 10119187 10119275 3'utr CG3940 FlyBase G31474.1 TGAAGGGAGCAGCCAATGACATACTCGTACCAAAGAATCGTTTAAGACAACGAATTTGTTTACCAACTATTTTAACAATTTAACAAAAA 64 10119214 0.976016478 7 60 282 0.956521739 1.643452676 0.097826087 0.328125 0.532608696 64 3 1 88 3R:10119187-10119275 8 99.5 2116 FBgn0037788 7.956666667 0.546666667 0.833333333 12.5052367 182.0121951 119.4 1 1 1 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3R 10119358 10119364 + 3R_10119358_10119364_+ 0.77544359 0.506127733 0.640785661 0.190435099 CG3940 FBtr0344391|FBtr0082179|FBtr0344392 10119168|10119168|10119168 10119424|10119424|10120081 3R + 10119282 10119387 3'utr CG3940 FlyBase G41708.1 GGAGACACAGGAGAGCAACGTCAGACCAGACAATTTATACTCATTAATTGTAATGCAGAACAGAACAAGAATTCAGCTAGTCAGTTTGTGTAAAGTTCATTAAGTG 141 10119354 0.982351544 14 122 913 0.865853659 1.67516709 0.18902439 0.14893617 0.268292683 141 20 2 142 3R:10119282-10119387 7 CG3940 FBtr0082179|FBtr0344392|FBtr0344391 10119168|10119168|10119168 10119424|10120081|10119424 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 10119278 10119379 3'utr CG3940 FlyBase G31474.2 AAACGGAGACACAGGAGAGCAACGTCAGACCAGACAATTTATACTCATTAATTGTAATGCAGAACAGAACAAGAATTCAGCTAGTCAGTTTGTGTAAAGTTC 86 10119354 0.976016478 12 71 552 0.868217054 1.447158031 0.209302326 0.360465116 0.573643411 86 14 3 112 3R:10119278-10119379 7 87.5 2117 FBgn0037788 7.956666667 0.546666667 0.833333333 10.99706745 160.0609756 105 4 4 4 0.2 dme-miR-970-3p 7mer-m8 TCTTATG 3R 10128050 10128056 - 3R_10128050_10128056_- 0.629977756 0.643383917 0.636680837 0.009479544 tws FBtr0082187|FBtr0082190|FBtr0082192|FBtr0082191|FBtr0082193|FBtr0345177|FBtr0082188|FBtr0082189|FBtr0082186 10126127|10126127|10127649|10127642|10127642|10126127|10127125|10126803|10127642 10128146|10128146|10128146|10128146|10128146|10128146|10128146|10128146|10128146 3R - 10128028 10128211 stop_codon tws FlyBase G49802.1 CCGAAGAAAATATCATCGCCGTGGCTGCGACCAATAACCTCTTCATATTTCAGGATAAATTTTAGCCAACACTCCTCACAAGAACCACACCATACGCCACAATCACACAAGCAACTATATCTACAGAAACACCAAGAAGTACGATCACGCCTCATTCTTATGTTAAATTAATCGGTTTGCTTCA 41 10128057 0.980352169 12 39 282 0.955555556 1.633468456 0.111111111 0.097560976 0.177777778 41 2 0 43 3R:10128028-10128211 7 tws FBtr0082189|FBtr0082186|FBtr0345177|FBtr0082188|FBtr0082191|FBtr0082193|FBtr0082187|FBtr0082190|FBtr0082192 10126803|10127642|10126127|10127125|10127642|10127642|10126127|10126127|10127649 10128146|10128146|10128146|10128146|10128146|10128146|10128146|10128146|10128146 TCTTATG 7mer-m8 dme-miR-970-3p 3R - 10128035 10128075 3'utr tws FlyBase G37651.1 AAGTACGATCACGCCTCATTCTTATGTTAAATTAATCGGTT 20 10128057 0.743410919 6 19 177 0.961538462 1.397940009 0.153846154 0.25 0.423076923 20 1 0 25 3R:10128035-10128075 7 21 2118 FBgn0004889 1118.713333 47.59666667 73.08666667 0.018771565 0.441207367 0.28733011 1 1 1 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3R 10158850 10158855 + 3R_10158850_10158855_+ 0.978560721 0.999969092 0.989264906 0.015138025 Invadolysin FBtr0082181 10158308 10159134 3R + 10158783 10158861 3'utr Invadolysin FlyBase G41714.1 AGCCAATCATTTTCGGGTGGATCATCCAAAGGCAGTTCTATGCTTCTTGAATATCGATCTGTACATTCCAAAGCCTATT 14 10158846 0.967226416 8 14 90 1 1.204119983 0.1875 0.142857143 0.25 14 0 0 16 3R:10158783-10158861 6 Invadolysin FBtr0082181 10158308 10159134 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 10158812 10158859 3'utr Invadolysin FlyBase G31480.1 AGGCAGTTCTATGCTTCTTGAATATCGATCTGTACATTCCAAAGCCTA 5 10158847 0.982929752 4 5 38 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:10158812-10158859 6 5 2119 FBgn0086359 69.66666667 2.306666667 3.503333333 0.071770335 2.167630058 1.427212179 4 3 3.5 0.2 dme-miR-305-5p 8mer-m1 AGTACAAT 3R 10302596 10302603 + 3R_10302596_10302603_+ 0.378443466 0.401019669 0.389731567 0.015963784 CG43143 FBtr0305356|FBtr0337049 10302298|10302298 10302898|10302898 3R + 10302566 10302638 3'utr CG43143 FlyBase G41728.1 AAGGCAGCAGTAGCGCAACCACATTCCCTCAGTACAATGAATATTGTATTATTGTGATTTTGATTTTAAAATT 65 10302589 0.918488346 6 63 438 0.973333333 1.86332286 0.186666667 0.138461538 0.253333333 65 2 0 73 3R:10302566-10302638 8 CG43143 FBtr0337049|FBtr0305356 10302298|10302298 10302898|10302898 AGTACAAT 8mer-m1 dme-miR-305-5p 3R + 10302574 10302638 3'utr CG43143 FlyBase G31490.1 AGTAGCGCAACCACATTCCCTCAGTACAATGAATATTGTATTATTGTGATTTTGATTTTAAAATT 49 10302589 0.93364133 6 47 387 0.970588235 1.51851394 0.161764706 0.265306122 0.470588235 49 1 1 66 3R:10302574-10302638 8 39 2120 FBgn0262617 452.3433333 9.223333333 14.24666667 0.086217696 4.228406216 2.737482452 7 7 7 0.2 dme-miR-999-3p 6mer3-8 AGTTAA 3R 10312110 10312115 - 3R_10312110_10312115_- 0.92041596 0.933308181 0.92686207 0.009116162 Bruce FBtr0331684|FBtr0331682|FBtr0082239|FBtr0331683|FBtr0331681 10312037|10312037|10312037|10312037|10312037 10312643|10312643|10312643|10312643|10312643 3R - 10312093 10312135 3'utr Bruce FlyBase G49875.1 ATGTATGAACGTAGTGATTTAGTTAAATATTGACACAAGAATA 40 10312117 0.890763749 5 36 333 0.918367347 1.352182518 0.142857143 0.225 0.367346939 40 3 1 45 3R:10312093-10312135 6 Bruce FBtr0331681|FBtr0331683|FBtr0082239|FBtr0331682|FBtr0331684 10312037|10312037|10312037|10312037|10312037 10312643|10312643|10312643|10312643|10312643 AGTTAA 6mer3-8 dme-miR-999-3p 3R - 10312101 10312139 3'utr Bruce FlyBase G37702.1 AACTATGTATGAACGTAGTGATTTAGTTAAATATTGACA 18 10312117 0.704239503 4 18 149 1 1.380211242 0.125 0.333333333 0.5 18 0 0 24 3R:10312101-10312139 6 29 2121 FBgn0266717 4248.75 33.1 50.67666667 0.006825537 0.876132931 0.572255476 2 2 2 0.2 dme-miR-965-3p 8mer-A1 TACGCTTA 3R 10360332 10360339 + 3R_10360332_10360339_+ 0.618772416 0.62232489 0.620548653 0.002511997 jumu FBtr0082237 10360257 10361612 3R + 10360291 10360360 3'utr jumu FlyBase G41772.1 ATCAATTAGTTTTAGACCTTTGGCATTTAAGAAACCCATGCTACGCTTAAACGTAATCCTAGAAGCCCCA 54 10360332 0.79811269 7 53 237 1 1.826074803 0.298507463 0.203703704 0.358208955 54 0 0 67 3R:10360291-10360360 8 jumu FBtr0082237 10360257 10361612 TACGCTTA 8mer-A1 dme-miR-965-3p 3R + 10360294 10360355 3'utr jumu FlyBase G31514.1 AATTAGTTTTAGACCTTTGGCATTTAAGAAACCCATGCTACGCTTAAACGTAATCCTAGAAG 55 10360332 0.768103162 8 50 250 0.918604651 1.2955671 0.348837209 0.309090909 0.558139535 55 4 3 79 3R:10360294-10360355 8 45 2122 FBgn0015396 1426.553333 44.76666667 68.68333333 0.031544562 1.005212211 0.655180781 0 0 0 0.2 dme-bantam-3p 7mer-m8 TGATCTC 3R 10360735 10360741 + 3R_10360735_10360741_+ 0.659849101 0.661066695 0.660457898 0.000860973 jumu FBtr0082237 10360257 10361612 3R + 10360707 10360817 3'utr jumu FlyBase G41776.2 GAGCTGGTTTGAGTTGCAACTTTTGATTTGATCTCCCTACTGACAAATAAATTTTCATCCTTCAATCGATAAGAAACTTGACAATGCATTTATGACAAACGATTCCACGCT 95 10360734 0.769639749 17 90 867 0.946902655 2.029383778 0.088495575 0.147368421 0.283185841 95 6 0 107 3R:10360707-10360817 7 jumu FBtr0082237 10360257 10361612 TGATCTC 7mer-m8 dme-bantam-3p 3R + 10360663 10360815 3'utr jumu FlyBase G31516.1 CCACTGACGACGCATGAAGCATGTTAATACTTTTTACCAGACTCGAGCTGGTTTGAGTTGCAACTTTTGATTTGATCTCCCTACTGACAAATAAATTTTCATCCTTCAATCGATAAGAAACTTGACAATGCATTTATGACAAACGATTCCACG 80 10360734 0.954561351 21 75 714 0.922330097 1.375663614 0.067961165 0.2625 0.427184466 80 5 3 95 3R:10360663-10360815 7 68 2123 FBgn0015396 1426.553333 44.76666667 68.68333333 0.047667338 1.518987342 0.990050959 1 1 1 0.2 dme-miR-8-3p 7mer-m8 CAGTATT 3R 10361004 10361010 + 3R_10361004_10361010_+ 0.641620047 0.638743201 0.640181624 0.002034205 jumu FBtr0082237 10360257 10361612 3R + 10360968 10361027 3'utr jumu FlyBase G41778.1 AATTGAAAGAGAATTGATCACACATACTTGCCGGTCCAGTATTCGTAAGCGAGGTATATT 95 10360997 0.849758722 10 92 592 0.983471074 2.075546961 0.132231405 0.210526316 0.380165289 95 2 0 119 3R:10360968-10361027 7 jumu FBtr0082237 10360257 10361612 CAGTATT 7mer-m8 dme-miR-8-3p 3R + 10360967 10361038 3'utr jumu FlyBase G31517.1 AAATTGAAAGAGAATTGATCACACATACTTGCCGGTCCAGTATTCGTAAGCGAGGTATATTGAGGATTTTTA 73 10360997 0.853718753 11 72 437 0.962616822 2.012837225 0.112149533 0.301369863 0.523364486 73 4 0 103 3R:10360967-10361038 7 72.5 2124 FBgn0015396 1426.553333 44.76666667 68.68333333 0.050821794 1.619508563 1.055569037 7 7 7 0.2 dme-miR-14-3p 6mer3-8 AAGACT 3R 10361265 10361270 + 3R_10361265_10361270_+ 0.5211422 0.558494106 0.539818153 0.026411782 jumu FBtr0082237 10360257 10361612 3R + 10361218 10361339 3'utr jumu FlyBase G41779.1 TGTAAACGAAATCCGAATTCCAAATAATACAAGATACGAAAACCAATAAGACTTAAAAGAAGCGTACCAGACTAATGAACATGATCAGGCCTCAGAAGTAAATAGTACAAAGAGCTAGACTT 141 10361264 0.980647242 12 116 397 0.866666667 1.377184787 0.218181818 0.113475177 0.242424242 141 17 5 143 3R:10361218-10361339 6 jumu FBtr0082237 10360257 10361612 AAGACT 6mer3-8 dme-miR-14-3p 3R + 10361248 10361334 3'utr jumu FlyBase G31519.1 AAGATACGAAAACCAATAAGACTTAAAAGAAGCGTACCAGACTAATGAACATGATCAGGCCTCAGAAGTAAATAGTACAAAGAGCTA 82 10361264 0.947483738 7 67 196 0.879032258 2.037426498 0.346774194 0.37804878 0.588709677 82 15 0 109 3R:10361248-10361334 6 69.5 2125 FBgn0015396 1426.553333 44.76666667 68.68333333 0.048718823 1.552494415 1.011890318 1 1 1 0.2 dme-miR-11-3p 7mer-m1 TGTGATG 3R 10361417 10361423 + 3R_10361417_10361423_+ 0.611650064 0.611966945 0.611808505 0.000224011 jumu FBtr0082237 10360257 10361612 3R + 10361396 10361509 3'utr jumu FlyBase G41780.1 TTTGTTATTACCCTTTTCTTTTGTGATGCTTCGACTTAGCTTGCGCATTTAACAATTCCATTTACGAACCAGGAACATTTATGCATTTTTTGTTGTAATATTAGCACCTAAATA 52 10361415 0.94948096 19 51 525 0.969230769 1.799340549 0.307692308 0.230769231 0.384615385 52 2 0 63 3R:10361396-10361509 7 jumu FBtr0082237 10360257 10361612 TGTGATG 7mer-m1 dme-miR-11-3p 3R + 10361370 10361556 3'utr jumu FlyBase G31520.1 AGGATGGCTGATGGAATTAAACCGTTTTTGTTATTACCCTTTTCTTTTGTGATGCTTCGACTTAGCTTGCGCATTTAACAATTCCATTTACGAACCAGGAACATTTATGCATTTTTTGTTGTAATATTAGCACCTAAATATTGTATTTAATCATTAAGTGAAGCTCTGTAAATCTTTAAGCTAAGAA 45 10361415 0.991478366 25 41 442 0.921875 1.469822016 0.375 0.311111111 0.515625 45 4 1 59 3R:10361370-10361556 7 22.5 2126 FBgn0015396 1426.553333 44.76666667 68.68333333 0.015772281 0.502606106 0.327590391 2 2 2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 10399396 10399401 + 3R_10399396_10399401_+ 0.999959369 0.999961152 0.99996026 1.27E-06 cwo FBtr0082246|FBtr0082246|FBtr0082246|FBtr0305152|FBtr0305152|FBtr0305152|FBtr0305151|FBtr0305151|FBtr0305151 10399337|10399337|10399337|10399337|10399337|10399337|10399337|10399337|10399337 10400752|10400752|10400752|10400752|10400752|10400752|10400752|10400752|10400752 3R + 10399279 10399422 stop_codon cwo FlyBase G41802.1 GTGGCCGCCGCAGCGGTGGCTAAGGCCAAACTGGAGCAGGCCATGAACCAGAGCTGGTAAAGCAAAGCAATCGCAATGCAATGGGTCGACAGATGGAACAACACTACCTCAGTACTTCTGTGAATAATCATTAAATGATTAATC 78 10399395 0.9785535 14 73 483 0.944444444 1.929418926 0.344444444 0.08974359 0.211111111 78 5 0 85 3R:10399279-10399422 6 cwo FBtr0305151|FBtr0305151|FBtr0305151|FBtr0082246|FBtr0082246|FBtr0082246|FBtr0305152|FBtr0305152|FBtr0305152 10399337|10399337|10399337|10399337|10399337|10399337|10399337|10399337|10399337 10400752|10400752|10400752|10400752|10400752|10400752|10400752|10400752|10400752 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 10399307 10399411 stop_codon cwo FlyBase G31537.1 AACTGGAGCAGGCCATGAACCAGAGCTGGTAAAGCAAAGCAATCGCAATGCAATGGGTCGACAGATGGAACAACACTACCTCAGTACTTCTGTGAATAATCATTA 38 10399395 0.976328673 13 35 224 0.896551724 1.716003344 0.24137931 0.421052632 0.620689655 38 6 0 52 3R:10399307-10399411 6 33 2127 FBgn0259938 1085.47 27.38 41.65666667 0.030401577 1.205259313 0.792190126 1 1 1 0.2 dme-miR-8-3p 6mer2-7 AGTATT 3R 10403397 10403402 - 3R_10403397_10403402_- 0.993122913 0.608726747 0.80092483 0.27180916 CG6325 FBtr0082260 10402965 10403647 3R - 10403308 10403479 3'utr CG6325 FlyBase G49962.2 AGTTTTTAGTTTGCAAAACTCGATAAGGTTGCGTGCATCTAGTTCAGTTCTAAACACAAACAACGTGTGCTGTATTTAGTATTTAGTTACCTATACCTTACTTAGTGCAACGAAACGCTTTTCAAAAACATGAAACGCGTCCTTATTTCGACTGAAGTCATTTAAGTAATCT 293 10403414 0.859314629 32 274 2305 0.947513812 2.058172865 0.132596685 0.184300341 0.339779006 293 17 2 343 3R:10403308-10403479 6 CG6325 FBtr0082260 10402965 10403647 AGTATT 6mer2-7 dme-miR-8-3p 3R - 10403309 10403472 3'utr CG6325 FlyBase G37774.1 AGTTTGCAAAACTCGATAAGGTTGCGTGCATCTAGTTCAGTTCTAAACACAAACAACGTGTGCTGTATTTAGTATTTAGTTACCTATACCTTACTTAGTGCAACGAAACGCTTTTCAAAAACATGAAACGCGTCCTTATTTCGACTGAAGTCATTTAAGTAATC 218 10403413 0.884402294 25 212 1702 0.975683891 1.728353782 0.170212766 0.366972477 0.580547112 218 3 5 321 3R:10403309-10403472 6 84.5 2128 FBgn0037814 441 14.70666667 22.57666667 0.191609977 5.745693563 3.742802303 12 11 11.5 0.2 dme-miR-970-3p 7mer-A1 CTTATGA 3R 10766323 10766329 + 3R_10766323_10766329_+ 0.656956542 0.517282393 0.587119467 0.098764503 Cap-H2 FBtr0301310|FBtr0302571|FBtr0301311 10765896|10765896|10765896 10766756|10766756|10766756 3R + 10766297 10766325 3'utr Cap-H2 FlyBase G41830.1 TTAACTTTTTACGACGCTTTTAGTTGCTT 5 10766317 0.684581017 3 5 56 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 3R:10766297-10766325 3 Cap-H2 FBtr0302571|FBtr0301311|FBtr0301310 10765896|10765896|10765896 10766756|10766756|10766756 CTTATGA 7mer-A1 dme-miR-970-3p 3R + 10766295 10766329 3'utr Cap-H2 FlyBase G31562.1 TTTTAACTTTTTACGACGCTTTTAGTTGCTTATGA 6 10766316 0.76784728 2 6 72 1 1.079181246 0.25 0.5 0.75 6 0 0 12 3R:10766295-10766329 7 3 2129 FBgn0037831 545.8533333 16.72666667 25.64 0.005495982 0.179354324 0.11700468 6 7 6.5 0.2 dme-bantam-3p 7mer-m8 TGATCTC 3R 10766554 10766560 + 3R_10766554_10766560_+ 0.242313899 0.313808493 0.278061196 0.050554316 Cap-H2 FBtr0301310|FBtr0302571|FBtr0301311 10765896|10765896|10765896 10766756|10766756|10766756 3R + 10766449 10766688 stop_codon Cap-H2 FlyBase G41832.1 CTATACCTCCTTTGATTTAGAACAAAAATAGACAAATGACTTTTTGATTGACGAAGCGCGTGTTTTGGAAATCCTCATGAGCTGATAGTACTAAATTCAAGTACCTGATCTCGTCTGTACAAAAGTATAAACATAAGAACTCTTCGGACATAAGACAAAGTTCAAGATAAATTAAGGATAAAGTGTATATATACGTATGTATTTACCAGAGTGCAAGCTAGTGTCTATTTACAATCATTT 205 10766554 0.858930827 32 182 1387 0.881355932 1.363820826 0.233050847 0.131707317 0.245762712 205 20 8 208 3R:10766449-10766688 7 Cap-H2 FBtr0302571|FBtr0301311|FBtr0301310 10765896|10765896|10765896 10766756|10766756|10766756 TGATCTC 7mer-m8 dme-bantam-3p 3R + 10766467 10766744 stop_codon Cap-H2 FlyBase G31563.1 AGAACAAAAATAGACAAATGACTTTTTGATTGACGAAGCGCGTGTTTTGGAAATCCTCATGAGCTGATAGTACTAAATTCAAGTACCTGATCTCGTCTGTACAAAAGTATAAACATAAGAACTCTTCGGACATAAGACAAAGTTCAAGATAAATTAAGGATAAAGTGTATATATACGTATGTATTTACCAGAGTGCAAGCTAGTGTCTATTTACAATCATTTTAAGATATAATGTTTTTTTCGTAAGTATAACGTGTAGTTCTTAAGGAATAAAACGG 153 10766555 0.983348056 33 136 1043 0.8647343 1.349763044 0.173913043 0.287581699 0.473429952 153 21 7 179 3R:10766467-10766744 7 113.5 2130 FBgn0037831 545.8533333 16.72666667 25.64 0.207931312 6.785571941 4.426677067 0 -1 -0.5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 10786616 10786621 - 3R_10786616_10786621_- 0.772318793 0.999681633 0.886000213 0.160769778 Art1 FBtr0082304 10786479 10786765 3R - 10786566 10786639 3'utr Art1 FlyBase G50013.1 TTCTCCTAAGTTTAAAGTGTACCTTTGTTAGTATACATAATATTTTACACTCGTGCGCCTGTTTAAATTATTAT 43 10786622 0.886610587 4 42 430 0.980392157 1.397940009 0.058823529 0.162790698 0.294117647 43 0 1 50 3R:10786566-10786639 6 Art1 FBtr0082304 10786479 10786765 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 10786566 10786684 3'utr Art1 FlyBase G37813.1 AAGGTTTATTCCAGTGCGAAATGTGCAACGAATTCGTGTTGCGTCTTCTCCTAAGTTTAAAGTGTACCTTTGTTAGTATACATAATATTTTACACTCGTGCGCCTGTTTAAATTATTAT 42 10786622 0.98844668 10 38 386 0.948275862 1.740362689 0.068965517 0.357142857 0.534482759 42 3 0 55 3R:10786566-10786684 6 36 2131 FBgn0037834 664.3333333 53.06 81.07333333 0.054189664 0.678477196 0.444042431 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 10817146 10817151 + 3R_10817146_10817151_+ 0.999806917 0.999858242 0.999832579 3.63E-05 CG4089 FBtr0082281|FBtr0082281|FBtr0082281 10817111|10817111|10817111 10817490|10817490|10817490 3R + 10817120 10817177 3'utr CG4089 FlyBase G41844.1 TAATTATCTTCTTATGTAAATACTTACTGTGACATGGTAACCTCTTATGCTCAGCATT 21 10817144 0.887322493 6 21 150 1 1.342422681 0.045454545 0.047619048 0.090909091 21 0 0 22 3R:10817120-10817177 6 CG4089 FBtr0082281|FBtr0082281|FBtr0082281 10817111|10817111|10817111 10817490|10817490|10817490 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 10817129 10817188 3'utr CG4089 FlyBase G31575.1 TCTTATGTAAATACTTACTGTGACATGGTAACCTCTTATGCTCAGCATTAGTTAATTGGC 19 10817144 0.982143272 9 19 132 1 1.491361694 0.225806452 0.421052632 0.64516129 19 0 0 31 3R:10817129-10817188 6 16.5 2132 FBgn0037838 56.27 3.373333333 5.153333333 0.293229074 4.891304348 3.201811125 2 2 2 0.2 dme-bantam-3p 6mer3-8 TGATCT 3R 10856097 10856102 + 3R_10856097_10856102_+ 0.999868499 0.999977266 0.999922882 7.69E-05 CG4511 FBtr0302202|FBtr0082286 10855766|10855766 10856412|10856412 3R + 10856080 10856121 3'utr CG4511 FlyBase G41852.2 TAAGCGAACTCAAAATTTGATCTTTATGGTATTTGCAATTCC 37 10856096 0.671803122 10 37 337 1 1.602059991 0.375 0.081081081 0.15 37 0 0 40 3R:10856080-10856121 6 CG4511 FBtr0302202|FBtr0082286 10855766|10855766 10856412|10856412 TGATCT 6mer3-8 dme-bantam-3p 3R + 10856072 10856115 3'utr CG4511 FlyBase G31583.1 AGCGAGCTTAAGCGAACTCAAAATTTGATCTTTATGGTATTTGC 31 10856096 0.945136748 7 31 256 1 1.69019608 0.183673469 0.419354839 0.632653061 31 0 0 49 3R:10856072-10856115 6 31.5 2133 FBgn0037843 1348.566667 118.0666667 181.7 0.023358133 0.266798419 0.173362686 1 1 1 0.2 dme-bantam-3p 6mer3-8 TGATCT 3R 10857909 10857914 + 3R_10857909_10857914_+ 0.998670741 0.996894439 0.99778259 0.001256034 CG4570 FBtr0082287 10857844 10858066 3R + 10857890 10857920 3'utr CG4570 FlyBase G41860.1 TTGAAAATAACGACGTTCATGATCTTGTTTA 12 10857909 0.681254338 4 12 101 1 1.278753601 0 0.416666667 0.631578947 12 0 0 19 3R:10857890-10857920 6 CG4570 FBtr0082287 10857844 10858066 TGATCT 6mer3-8 dme-bantam-3p 3R + 10857897 10857922 3'utr CG4570 FlyBase G31587.1 TAACGACGTTCATGATCTTGTTTAAT 8 10857917 0.572137203 4 8 65 1 1.113943352 0 0.25 0.538461538 8 0 0 13 3R:10857897-10857922 6 10 2134 FBgn0037844 66 6.4 9.756666667 0.151515152 1.5625 1.024940212 0 -8 -4 0.2 dme-miR-965-3p 7mer-m8 TACGCTT 3R 10895356 10895362 + 3R_10895356_10895362_+ 0.617120481 0.618478463 0.617799472 0.000960251 Leash FBtr0082325 10895233 10896418 3R + 10895340 10895443 3'utr Leash FlyBase G41875.1 TATATCCTAGACCTTCTACGCTTCGAGCACAAACCATATGCAAATTGTGCACAAATCAAGTTATACGCTGATATACCCTATTTATGTTTACCTTTGATTTCACC 39 10895356 0.848308308 12 37 240 0.941176471 1.204119983 0.058823529 0.205128205 0.392156863 39 1 2 48 3R:10895340-10895443 7 Leash FBtr0082325 10895233 10896418 TACGCTT 7mer-m8 dme-miR-965-3p 3R + 10895339 10895376 3'utr Leash FlyBase G31600.1 ATATATCCTAGACCTTCTACGCTTCGAGCACAAACCAT 17 10895356 0.950258499 3 17 84 1 1.380211242 0.291666667 0.235294118 0.458333333 17 0 0 24 3R:10895339-10895376 7 21 2135 FBgn0037856 180.5566667 6.93 10.65333333 0.116306977 3.03030303 1.971214018 0 0 0 0.2 dme-miR-79-3p 7mer-A1 AGCTTTA 3R 10896174 10896180 + 3R_10896174_10896180_+ 0.593500899 0.697439224 0.645470061 0.073495477 Leash FBtr0082325 10895233 10896418 3R + 10896148 10896196 3'utr Leash FlyBase G41878.1 AGACGCGAAGAATCAATGAATCAATAAGCTTTAGTGCCTCTGTATGATG 62 10896172 0.889442763 3 61 445 0.984848485 1.812913357 0.575757576 0.064516129 0.121212121 62 1 0 65 3R:10896148-10896196 7 Leash FBtr0082325 10895233 10896418 AGCTTTA 7mer-A1 dme-miR-79-3p 3R + 10896149 10896199 3'utr Leash FlyBase G31604.1 GACGCGAAGAATCAATGAATCAATAAGCTTTAGTGCCTCTGTATGATGAAC 33 10896172 0.886276381 5 33 243 1 1.672097858 0.446808511 0.333333333 0.531914894 33 0 0 47 3R:10896149-10896199 7 47 2136 FBgn0037856 180.5566667 6.93 10.65333333 0.26030609 6.782106782 4.411764706 2 2 2 0.2 "dme-miR-995-3p,dme-miR-998-3p" 6mer2-7 GGTGCT 3R 10896323 10896328 + 3R_10896323_10896328_+ 0.652712813 0.876723108 0.764717961 0.158399202 Leash FBtr0082325 10895233 10896418 3R + 10896302 10896340 3'utr Leash FlyBase G41879.1 ACGATCAAACGATTTCGTTAAGGTGCTTTACAAATCACT 18 10896329 0.764825833 2 16 138 0.869565217 0.823908741 0.086956522 0.277777778 0.434782609 18 1 2 20 3R:10896302-10896340 6 Leash FBtr0082325 10895233 10896418 GGTGCT 6mer2-7 "dme-miR-995-3p,dme-miR-998-3p" 3R + 10896302 10896337 3'utr Leash FlyBase G31605.1 ACGATCAAACGATTTCGTTAAGGTGCTTTACAAATC 13 10896329 0.936913917 3 12 109 0.857142857 0.653212514 0 0.538461538 0.714285714 13 0 3 18 3R:10896302-10896337 6 15 2137 FBgn0037856 180.5566667 6.93 10.65333333 0.083076412 2.164502165 1.408010013 -6 -6 -6 0.2 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 11212513 11212518 - 3R_11212513_11212518_- 0.9436119 0.923081946 0.933346923 0.014516902 ZnT86D FBtr0082371 11212306 11212867 3R - 11212499 11212537 3'utr ZnT86D FlyBase G50069.1 AAGCTAAGCGAAAGATTTTGTGCAAAGGTAAATATAAAT 7 11212520 0.839247432 3 6 35 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 3R:11212499-11212537 6 ZnT86D FBtr0082371 11212306 11212867 GTGCAA 6mer3-8 dme-miR-92b-3p 3R - 11212509 11212550 3'utr ZnT86D FlyBase G37860.1 TTAGTGTAATTGTAAGCTAAGCGAAAGATTTTGTGCAAAGGT 6 11212520 0.622986519 4 6 33 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 3R:11212509-11212550 6 4.5 2138 FBgn0037875 198.6666667 12.00333333 18.26333333 0.022651007 0.374895862 0.246395328 2 2 2 0.2 dme-bantam-3p 6mer3-8 TGATCT 3R 11212826 11212831 - 3R_11212826_11212831_- 0.800431415 0.863699459 0.832065437 0.044737303 ZnT86D FBtr0082371 11212306 11212867 3R - 11212811 11212859 3'utr ZnT86D FlyBase G50071.1 GGATCGACCCACCGGTGTCCTTGTACAATGATCTGTATAGTTATCAGCG 27 11212831 0.987790576 6 26 247 0.965517241 1.447158031 0.206896552 0.074074074 0.137931034 27 1 0 28 3R:11212811-11212859 6 ZnT86D FBtr0082371 11212306 11212867 TGATCT 6mer3-8 dme-bantam-3p 3R - 11212812 11212859 3'utr ZnT86D FlyBase G37862.1 GGATCGACCCACCGGTGTCCTTGTACAATGATCTGTATAGTTATCAGC 23 11212831 0.989071878 6 19 185 0.838709677 1.113943352 0.225806452 0.260869565 0.451612903 23 4 1 26 3R:11212812-11212859 6 24.5 2139 FBgn0037875 198.6666667 12.00333333 18.26333333 0.123322148 2.041099695 1.341485673 0 0 0 0.2 dme-miR-2a-2-5p 7mer-m1 GATGAGG 3R 11223253 11223259 + 3R_11223253_11223259_+ 0.786660541 0.82403729 0.805348916 0.026429389 RpL3 FBtr0302586 11223138 11224944 3R + 11223193 11223269 3'utr RpL3 FlyBase G41912.1 AAATTGCCTGACGAGTGAGCATGACAAGGAAGACTGCATCTCCGCTCGCCATTCGTTTGCGATGAGGCGCACTTCCT 10 11223249 0.95222705 7 10 48 1 1.113943352 0.076923077 0.3 0.461538462 10 0 0 13 3R:11223193-11223269 7 RpL3 FBtr0302586 11223138 11224944 GATGAGG 7mer-m1 dme-miR-2a-2-5p 3R + 11223223 11223264 3'utr RpL3 FlyBase G31633.1 AGACTGCATCTCCGCTCGCCATTCGTTTGCGATGAGGCGCAC 7 11223249 0.966904424 4 7 36 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 3R:11223223-11223264 7 6 2140 FBgn0020910 9247.463333 756.2966667 1140.143333 0.000648827 0.007933395 0.005262496 4 4 4 0.2 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3R 11224118 11224123 + 3R_11224118_11224123_+ 0.991394119 0.704114728 0.847754423 0.203137212 RpL3 FBtr0302586 11223138 11224944 3R + 11224093 11224143 3'utr RpL3 FlyBase G41916.1 AGGGTCTGCGCAAGGTGGCCTGTATTGGTGCCTGGCATCCGTCGCGTGTGT 10 11224118 0.724960622 7 10 61 1 1.041392685 0.272727273 0.1 0.181818182 10 0 0 11 3R:11224093-11224143 6 RpL3 FBtr0302586 11223138 11224944 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3R + 11224099 11224170 3'utr RpL3 FlyBase G31636.1 TGCGCAAGGTGGCCTGTATTGGTGCCTGGCATCCGTCGCGTGTGTCCACCACCGTGGCCCGTGCCGGTCAGA 14 11224118 0.980073277 6 12 83 0.863636364 1.278753601 0.181818182 0.428571429 0.636363636 14 3 0 19 3R:11224099-11224170 6 10 2141 FBgn0020910 9247.463333 756.2966667 1140.143333 0.001081378 0.013222325 0.008770827 0 0 0 0.2 dme-miR-980-3p 6mer2-7 GCAGCT 3R 11230719 11230724 - 3R_11230719_11230724_- 0.998925812 0.999089048 0.99900743 0.0001154 CG17187 FBtr0082365 11230615 11230808 3R - 11230701 11230738 3'utr CG17187 FlyBase G50088.1 AATTTAGCAACTATGCAGCTGATTTATAATACATTTAC 22 11230726 0.833959911 4 22 145 1 1.556302501 0 0.363636364 0.611111111 22 0 0 36 3R:11230701-11230738 6 CG17187 FBtr0082365 11230615 11230808 GCAGCT 6mer2-7 dme-miR-980-3p 3R - 11230709 11230738 3'utr CG17187 FlyBase G37874.1 AATTTAGCAACTATGCAGCTGATTTATAAT 28 11230726 0.78404609 5 28 170 1 1.62324929 0 0.321428571 0.547619048 28 0 0 42 3R:11230709-11230738 6 25 2142 FBgn0037882 159.3333333 15.59 23.78333333 0.156903766 1.603592046 1.051156272 2 2 2 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3R 11232501 11232507 - 3R_11232501_11232507_- 0.82314738 0.82333374 0.82324056 0.000131734 Arfip FBtr0082364 11232427 11233081 3R - 11232455 11232538 3'utr Arfip FlyBase G50091.1 CGAGCTTGCATAATTTGAAATCATTGTTTTACTAGTCATCGTATTATTTACACTAAAATGAAGTCTATATATATATAAAAATAT 59 11232511 0.825922262 16 53 630 0.922077922 1.851258349 0.077922078 0.271186441 0.441558442 59 6 0 71 3R:11232455-11232538 7 Arfip FBtr0082364 11232427 11233081 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R - 11232460 11232550 3'utr Arfip FlyBase G37877.1 AAACTGTTTTTGCGAGCTTGCATAATTTGAAATCATTGTTTTACTAGTCATCGTATTATTTACACTAAAATGAAGTCTATATATATATAAA 54 11232510 0.800969827 19 47 529 0.91011236 1.607455023 0.224719101 0.462962963 0.674157303 54 7 1 81 3R:11232460-11232550 7 43.5 2143 FBgn0037884 616.2333333 37.68 58.01666667 0.070590144 1.154458599 0.749784545 4 3 3.5 0.2 dme-miR-968-5p 6mer3-8 ACTACT 3R 11232764 11232769 - 3R_11232764_11232769_- 0.999992185 0.737344021 0.868668103 0.185720323 Arfip FBtr0082364 11232427 11233081 3R - 11232724 11232783 3'utr Arfip FlyBase G50094.1 ATGTAACTCGCTGTACTACTCACATTTCCACAGCTGGTACGCTGACGTTCCTTTAACTTG 8 11232760 0.963007183 6 7 57 0.875 0.84509804 0 0 0 8 1 0 7 3R:11232724-11232783 6 Arfip FBtr0082364 11232427 11233081 ACTACT 6mer3-8 dme-miR-968-5p 3R - 11232759 11232800 3'utr Arfip FlyBase G37879.1 CAACCGCTTTCCATTGTATGTAACTCGCTGTACTACTCACAT 7 11232772 0.976346405 3 6 43 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3R:11232759-11232800 6 5.5 2144 FBgn0037884 616.2333333 37.68 58.01666667 0.008925191 0.14596603 0.094800345 -9 3 -3 0.2 dme-miR-8-3p 6mer3-8 CAGTAT 3R 11232927 11232932 - 3R_11232927_11232932_- 0.940100861 0.935114917 0.937607889 0.003525634 Arfip FBtr0082364 11232427 11233081 3R - 11232808 11232954 3'utr Arfip FlyBase G50095.1 AAGATCGGTGGCAGAGATGATTCAGTATGCGATGCAGTGGACAGAAACACTGCATGGCGAACCATAACAATATTTTCGTGCTAAGTTTAAGTCGAATTCCTAAGCCGTAAGCAGAAAGTGAGAGTGGTAGGTGTATGTTATTTATAT 83 11232934 0.979877153 13 74 527 0.888888889 1.903089987 0.3 0.084337349 0.155555556 83 10 0 80 3R:11232808-11232954 6 Arfip FBtr0082364 11232427 11233081 CAGTAT 6mer3-8 dme-miR-8-3p 3R - 11232876 11232953 3'utr Arfip FlyBase G37880.1 AGATCGGTGGCAGAGATGATTCAGTATGCGATGCAGTGGACAGAAACACTGCATGGCGAACCATAACAATATTTTCGT 66 11232934 0.981257469 8 58 418 0.894117647 1.403692338 0.552941176 0.212121212 0.388235294 66 7 2 76 3R:11232876-11232953 6 66 2145 FBgn0037884 616.2333333 37.68 58.01666667 0.107102288 1.751592357 1.137604137 2 2 2 0.2 dme-miR-283-5p 8mer-A1 TGATATTA 3R 11240079 11240086 + 3R_11240079_11240086_+ 0.352046263 0.560476823 0.456261543 0.14738262 CG31388 FBtr0304709|FBtr0082356 11238876|11240036 11240114|11240114 3R + 11240051 11240114 3'utr CG31388 FlyBase G41936.1 AGTTGCATGTTAATTATATATACCGAATTGATATTAATAAAGCTTCCGTTCCGCGTTCATGTTT 28 11240078 0.856489537 4 26 256 0.931034483 1.431363764 0.103448276 0.035714286 0.068965517 28 2 0 27 3R:11240051-11240114 8 CG31388 FBtr0082356|FBtr0304709 11240036|11238876 11240114|11240114 TGATATTA 8mer-A1 dme-miR-283-5p 3R + 11240051 11240109 3'utr CG31388 FlyBase G31650.1 AGTTGCATGTTAATTATATATACCGAATTGATATTAATAAAGCTTCCGTTCCGCGTTCA 20 11240078 0.981645834 2 20 150 1 1.531478917 0.323529412 0.5 0.705882353 20 0 0 34 3R:11240051-11240109 8 22.5 2146 FBgn0051388 90 7.313333333 11.29666667 0.25 3.07657247 1.991737976 1 1 1 0.2 dme-miR-283-5p 7mer-m8 TGATATT 3R 11242319 11242325 - 3R_11242319_11242325_- 0.560353197 0.564641312 0.562497254 0.003032145 CG17734 FBtr0082361|FBtr0082360|FBtr0308073 11242206|11242206|11242206 11242819|11242541|11243554 3R - 11242263 11242351 3'utr CG17734 FlyBase G50101.2 CAGTTTTGTAAACCTGCGTAAGATTGTGATATTGTGTGTTTTAATGTACAAGTTGAACATCCAAACGAAAGCTGTCGAAGCAGACGACA 85 11242328 0.97097103 9 79 680 0.920353982 1.318063335 0.513274336 0.282352941 0.460176991 85 5 4 104 3R:11242263-11242351 7 CG17734 FBtr0308073|FBtr0082360|FBtr0082361 11242206|11242206|11242206 11243554|11242541|11242819 TGATATT 7mer-m8 dme-miR-283-5p 3R - 11242305 11242343 3'utr CG17734 FlyBase G37885.1 TAAACCTGCGTAAGATTGTGATATTGTGTGTTTTAATGT 47 11242328 0.702732431 7 44 389 0.914285714 1.329058719 0.428571429 0.446808511 0.628571429 47 4 2 64 3R:11242305-11242343 7 63 2147 FBgn0037890 228.3333333 38.00666667 58.52666667 0.275912409 1.657603929 1.076432395 3 3 3 0.2 dme-miR-184-5p 6mer3-8 TGATAA 3R 11348467 11348472 - 3R_11348467_11348472_- 0.982851049 0.999722102 0.991286575 0.011929669 KP78a FBtr0301426 11346292 11348527 3R - 11348429 11348519 5'utr KP78a FlyBase G50109.1 CGGGTTGTTTGGGGCAATGTCAAGGTGATAGAGATAGAATGATAGAGTGATAAAGAAAGTGATACAGTCGGCCCTGACCGAGCATTCTAAC 42 11348445 0.962122559 11 34 173 0.803921569 1.135662602 0.215686275 0.214285714 0.352941176 42 8 2 41 3R:11348429-11348519 6 KP78a FBtr0301426 11346292 11348527 TGATAA 6mer3-8 dme-miR-184-5p 3R - 11348434 11348509 5'utr KP78a FlyBase G37890.1 GGGGCAATGTCAAGGTGATAGAGATAGAATGATAGAGTGATAAAGAAAGTGATACAGTCGGCCCTGACCGAGCATT 40 11348474 0.96677576 9 30 159 0.803278689 1.213074825 0.295081967 0.4 0.606557377 40 10 2 49 3R:11348434-11348509 6 28 2148 FBgn0026064 259.0966667 6.236666667 9.53 0.108067774 4.489577766 2.938090241 -27 2 -12.5 0.2 dme-miR-184-5p 8mer-m1 TGATAAGG 3R 11465776 11465783 + 3R_11465776_11465783_+ 0.50540519 0.527979585 0.516692387 0.015962511 CG17230 FBtr0339376 11465566 11467372 3R + 11465758 11465812 3'utr CG17230 FlyBase G41998.1 ACTATGTGCACTTGTAGTTGATAAGGCTGATAGATAGGCGCACCCCCCTACCCCC 134 11465779 0.864715658 4 129 891 0.966442953 2.158362492 0.167785235 0.089552239 0.181208054 134 5 0 144 3R:11465758-11465812 8 CG17230 FBtr0339376 11465566 11467372 TGATAAGG 8mer-m1 dme-miR-184-5p 3R + 11465748 11465807 3'utr CG17230 FlyBase G31687.1 AGCGAACACCACTATGTGCACTTGTAGTTGATAAGGCTGATAGATAGGCGCACCCCCCTA 85 11465779 0.856076045 5 81 552 0.96350365 2.120573931 0.328467153 0.423529412 0.642335766 85 5 0 132 3R:11465748-11465807 8 106.5 2149 FBgn0046225 82.24 4.006666667 6.103333333 1.294990272 26.58069884 17.44948116 -3 -3 -3 0.2 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 11466578 11466585 + 3R_11466578_11466585_+ 0.629568519 0.629510812 0.629539666 4.08E-05 CG17230 FBtr0339376 11465566 11467372 3R + 11466561 11466601 3'utr CG17230 FlyBase G41999.1 TGATATCTGCATTTGTTTCCGTCCAGAGTCGAGCCATCGAA 38 11466577 0.71232571 2 37 301 0.975609756 1.602059991 0.097560976 0.078947368 0.146341463 38 1 0 40 3R:11466561-11466601 8 CG17230 FBtr0339376 11465566 11467372 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R + 11466562 11466597 3'utr CG17230 FlyBase G31688.1 GATATCTGCATTTGTTTCCGTCCAGAGTCGAGCCAT 14 11466577 0.700897143 2 14 113 1 1.322219295 0.142857143 0.5 0.666666667 14 0 0 21 3R:11466562-11466597 8 26 2150 FBgn0046225 82.24 4.006666667 6.103333333 0.31614786 6.489184692 4.259967231 1 1 1 0.2 dme-miR-92b-3p 7mer-A1 TGCAATA 3R 11560055 11560061 - 3R_11560055_11560061_- 0.721373379 0.76074142 0.741057399 0.02783738 sea FBtr0100462|FBtr0100465|FBtr0100461|FBtr0100464 11559894|11559894|11559894|11559894 11560164|11560164|11560164|11560164 3R - 11559961 11560111 3'utr sea FlyBase G50134.1 AAACCCACTCGTGCATTTTCCTCTGTTCCCATTGTTCCCTAGTCGACTGTTGCAATAGTTTCTAGTTTTGTGACATATTCCAAGAAAGCATTTTATATACACTCTATACCCGCAATGGGTAAGTGGCTATAGAAATTATACAGCTTGTTTT 43 11560062 0.985722729 20 43 362 1 1.707570176 0.176470588 0.186046512 0.31372549 43 0 0 51 3R:11559961-11560111 7 sea FBtr0100461|FBtr0100464|FBtr0100462|FBtr0100465 11559894|11559894|11559894|11559894 11560164|11560164|11560164|11560164 TGCAATA 7mer-A1 dme-miR-92b-3p 3R - 11560028 11560114 3'utr sea FlyBase G37915.1 AAAAAACCCACTCGTGCATTTTCCTCTGTTCCCATTGTTCCCTAGTCGACTGTTGCAATAGTTTCTAGTTTTGTGACATATTCCAAG 20 11560062 0.988905702 10 18 173 0.923076923 1.380211242 0.115384615 0.3 0.461538462 20 2 0 24 3R:11560028-11560114 7 20 2151 FBgn0037912 356.1766667 26.12 39.85 0.05615191 0.765696784 0.501882058 1 1 1 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 11575748 11575753 + 3R_11575748_11575753_+ 0.991793744 0.986159774 0.988976759 0.003983769 Mrp4 FBtr0302027 11575669 11575937 3R + 11575633 11575845 lincRNA_intron-lincRNA_exon Mrp4 FlyBase G42027.1 AGGCTCATTTGGAATCAATGAAACCGAAATCGGAGTAGATTAAGCATCTGGTTATTGGTTACTAAACTGGGAGCCAACAAGGTCTCATTTCCTGGCTGTAAGCGTCTTCAAAGTTGTACCTAATCCAGTCAGCTGCATTTAAGCTAGTTTTCTACTTAAAGTATTATGCCTTCGAACCGTACATACTTGTATAACTCAATCCTTATAGATATA 573 11575724 0.838123886 37 543 4331 0.951145038 2.016336796 0.198473282 0.115183246 0.225954198 573 27 5 623 3R:11575633-11575845 6 Mrp4 FBtr0302027 11575669 11575937 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 11575633 11575849 lincRNA_intron-lincRNA_exon Mrp4 FlyBase G31713.1 AGGCTCATTTGGAATCAATGAAACCGAAATCGGAGTAGATTAAGCATCTGGTTATTGGTTACTAAACTGGGAGCCAACAAGGTCTCATTTCCTGGCTGTAAGCGTCTTCAAAGTTGTACCTAATCCAGTCAGCTGCATTTAAGCTAGTTTTCTACTTAAAGTATTATGCCTTCGAACCGTACATACTTGTATAACTCAATCCTTATAGATATACTAT 380 11575724 0.765042843 42 364 2866 0.955035971 2.424064525 0.284172662 0.339473684 0.548561151 380 24 1 531 3R:11575633-11575849 6 173 2152 FBgn0263316 1433.733333 36.35333333 55.55 0.120664001 4.75884834 3.114311431 24 24 24 0.2 dme-miR-92b-3p 6mer2-7 TGCAAT 3R 11584842 11584847 + 3R_11584842_11584847_+ 0.571773508 0.992465856 0.782119682 0.297474449 wkd FBtr0082413|FBtr0082414 11584642|11584642 11585305|11585305 3R + 11584809 11584867 3'utr wkd FlyBase G42036.1 AGTTGGTCAGTCAATTACGGAGACATCATTCCATGCAATCAGTTTGCTAATTTTAAGAC 10 11584837 0.972611558 4 9 59 1 1 0 0 0 10 0 0 10 3R:11584809-11584867 6 wkd FBtr0082413|FBtr0082414 11584642|11584642 11585305|11585305 TGCAAT 6mer2-7 dme-miR-92b-3p 3R + 11584825 11584860 3'utr wkd FlyBase G31717.1 ACGGAGACATCATTCCATGCAATCAGTTTGCTAATT 7 11584838 0.715576098 3 7 46 1 1 0 0.285714286 0.5 7 0 0 10 3R:11584825-11584860 6 7.5 2153 FBgn0037917 354.31 20.74 31.50666667 0.021167904 0.361620058 0.238044858 5 4 4.5 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 11585088 11585094 + 3R_11585088_11585094_+ 0.658708642 0.658851932 0.658780287 0.000101328 wkd FBtr0082413|FBtr0082414 11584642|11584642 11585305|11585305 3R + 11585004 11585227 3'utr wkd FlyBase G42038.1 GCGTAACATTTAAAACCGTAGCGTTAGCTTTGAGTTGAGGACCCCGAACATATCGTATGATTATCATGATGATTACCACCCTGAGGCAGCTGACACAAGGACTGGAGGATTATATAGTTTGAAACTTTGACTACTTTATCCGTATTAACTCTGAGACGAGAATGTTGATATTTACCTACGATAATGCGTTACGAACGACTTCTGTTGTGCCCCCGAGCCTGAAA 160 11585085 0.975565849 39 149 925 0.943589744 1.787696568 0.143589744 0.16875 0.317948718 160 9 2 184 3R:11585004-11585227 7 wkd FBtr0082413|FBtr0082414 11584642|11584642 11585305|11585305 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 11585004 11585179 3'utr wkd FlyBase G31719.1 GCGTAACATTTAAAACCGTAGCGTTAGCTTTGAGTTGAGGACCCCGAACATATCGTATGATTATCATGATGATTACCACCCTGAGGCAGCTGACACAAGGACTGGAGGATTATATAGTTTGAAACTTTGACTACTTTATCCGTATTAACTCTGAGACGAGAATGTTGATATTTACC 144 11585085 0.837263679 27 130 815 0.928571429 1.444936571 0.19047619 0.326388889 0.538095238 144 9 6 195 3R:11585004-11585179 7 62 2154 FBgn0037917 354.31 20.74 31.50666667 0.174988005 2.989392478 1.967837495 3 3 3 0.2 dme-miR-277-3p 6mer3-8 TGCATT 3R 11633900 11633905 - 3R_11633900_11633905_- 0.948683795 0.73501436 0.841849078 0.151087082 Csk FBtr0299728|FBtr0299729|FBtr0300549|FBtr0335449|FBtr0300547|FBtr0300546|FBtr0300548 11633276|11633276|11633276|11633276|11633276|11633276|11633276 11634819|11634819|11634819|11634819|11634819|11634819|11634819 3R - 11633827 11633937 3'utr Csk FlyBase G50194.1 AAACGAAAAAGAGAAAAACACTTGTGAAAATATGCATTACATTAAAACGTCTACATATACATAATACAATACACATTACCTACGTATTTAGCTTATAAATCGATTAATAAT 54 11633916 0.972678928 10 52 316 0.951612903 1.469822016 0.209677419 0.148148148 0.258064516 54 2 1 59 3R:11633827-11633937 6 Csk FBtr0300546|FBtr0300548|FBtr0335449|FBtr0300547|FBtr0299729|FBtr0300549|FBtr0299728 11633276|11633276|11633276|11633276|11633276|11633276|11633276 11634819|11634819|11634819|11634819|11634819|11634819|11634819 TGCATT 6mer3-8 dme-miR-277-3p 3R - 11633888 11633972 3'utr Csk FlyBase G37963.1 GGCGGCTGATAGGCTGCGTGTCCTTAAACTCAAGAAAACGAAAAAGAGAAAAACACTTGTGAAAATATGCATTACATTAAAACGT 36 11633915 0.9183125 8 33 130 0.979166667 1.672097858 0.166666667 0.25 0.4375 36 1 0 47 3R:11633888-11633972 6 14 2155 FBgn0262081 3599.453333 94.44666667 145.5866667 0.00388948 0.148231806 0.096162652 11 10 10.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 11673703 11673709 + 3R_11673703_11673709_+ 0.789518678 0.791991792 0.790755235 0.001748746 CG42327 FBtr0299789|FBtr0299789|FBtr0299789 11673461|11673461|11673461 11673974|11673974|11673974 3R + 11673690 11673720 3'utr CG42327 FlyBase G42072.1 ATTCCTTTATTATTGTGATATAATCGTACAT 9 11673702 0.680148299 2 9 97 1 1.079181246 0 0.222222222 0.416666667 9 0 0 12 3R:11673690-11673720 7 CG42327 FBtr0299789|FBtr0299789|FBtr0299789 11673461|11673461|11673461 11673974|11673974|11673974 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 11673686 11673721 3'utr CG42327 FlyBase G31753.1 ATGTATTCCTTTATTATTGTGATATAATCGTACATT 12 11673702 0.689120412 4 11 137 0.9 1.255272505 0.15 0.5 0.7 12 2 0 18 3R:11673686-11673721 7 10.5 2156 FBgn0259227 1487.13 32.72666667 50.52333333 0.00706058 0.320839275 0.207824767 1 1 1 0.2 dme-miR-184-5p 6mer3-8 TGATAA 3R 11743989 11743994 + 3R_11743989_11743994_+ 0.996405763 0.999962651 0.998184207 0.002515108 CG14722 FBtr0082431 11743724 11744027 3R + 11743979 11744016 3'utr CG14722 FlyBase G42095.1 GAAATGTTATTGATAATAGAACTGATTTAAAATAAAAT 11 11743990 0.690436529 5 11 85 1 1.113943352 0 0.181818182 0.307692308 11 0 0 13 3R:11743979-11744016 6 CG14722 FBtr0082431 11743724 11744027 TGATAA 6mer3-8 dme-miR-184-5p 3R + 11743934 11744017 3'utr CG14722 FlyBase G31775.1 AATCCCTAATATGTTGGACGAAGATTTTACACAAAGTTTCACAATGAAATGTTATTGATAATAGAACTGATTTAAAATAAAATA 17 11743992 0.984957361 10 16 123 0.958333333 1.361727836 0.166666667 0.352941176 0.541666667 17 1 0 23 3R:11743934-11744017 6 11.5 2157 FBgn0037943 542.9533333 32.08666667 49.30666667 0.021180457 0.358404322 0.233234181 -1 -3 -2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 11744632 11744638 - 3R_11744632_11744638_- 0.563850106 0.731647483 0.647748795 0.118650679 CG6923 FBtr0330169|FBtr0330169|FBtr0330169|FBtr0082433|FBtr0082433|FBtr0082433|FBtr0082432|FBtr0082432|FBtr0082432|FBtr0307892|FBtr0307892|FBtr0307892 11744481|11744481|11744481|11744481|11744481|11744481|11744227|11744227|11744227|11744481|11744481|11744481 11744911|11744911|11744911|11744938|11744938|11744938|11744938|11744938|11744938|11744938|11744938|11744938 3R - 11744625 11744649 3'utr CG6923 FlyBase G50234.1 AACAAAATTCTTGTGATAAGAATTT 5 11744638 0.628718048 2 4 32 1 0.698970004 0 0 0 5 0 0 5 3R:11744625-11744649 7 CG6923 FBtr0082432|FBtr0082432|FBtr0082432|FBtr0307892|FBtr0307892|FBtr0307892|FBtr0330169|FBtr0330169|FBtr0330169|FBtr0082433|FBtr0082433|FBtr0082433 11744227|11744227|11744227|11744481|11744481|11744481|11744481|11744481|11744481|11744481|11744481|11744481 11744938|11744938|11744938|11744938|11744938|11744938|11744911|11744911|11744911|11744938|11744938|11744938 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 11744626 11744714 3'utr CG6923 FlyBase G37989.1 AAGTATATTAAGTGATTCGGCAAATAATTTCCTATACATATGTACAAATTGTCTACGTTTTGTGAAACAAAATTCTTGTGATAAGAATT 12 11744640 0.989360084 8 9 86 0.8125 1.113943352 0.125 0.333333333 0.5 12 3 0 13 3R:11744626-11744714 7 4 2158 FBgn0037944 206.3266667 5.293333333 8.143333333 0.019386733 0.755667506 0.491199345 0 2 1 0.2 dme-miR-14-3p 7mer-A1 AGACTGA 3R 11744898 11744904 - 3R_11744898_11744904_- 0.782530534 0.797958906 0.79024472 0.010909526 CG6923 FBtr0330169|FBtr0082433|FBtr0082432|FBtr0307892 11744481|11744481|11744227|11744481 11744911|11744938|11744938|11744938 3R - 11744883 11744936 stop_codon CG6923 FlyBase G50237.1 TTGTGTGCACGGCATCTTTATGTAAATCCCTCAGACTGAGTTTGTTCTCGGCAT 49 11744906 0.982589196 7 42 319 0.842105263 0.903089987 0.087719298 0.12244898 0.245614035 49 4 5 48 3R:11744883-11744936 7 CG6923 FBtr0082432|FBtr0307892|FBtr0330169|FBtr0082433 11744227|11744481|11744481|11744481 11744938|11744938|11744911|11744938 AGACTGA 7mer-A1 dme-miR-14-3p 3R - 11744883 11744917 stop_codon CG6923 FlyBase G37990.1 ATGTAAATCCCTCAGACTGAGTTTGTTCTCGGCAT 24 11744906 0.868775497 3 24 139 1 1.491361694 0.032258065 0.25 0.419354839 24 0 0 31 3R:11744883-11744917 7 35.5 2159 FBgn0037944 206.3266667 5.293333333 8.143333333 0.172057255 6.706549118 4.359394187 2 2 2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 11751836 11751842 - 3R_11751836_11751842_- 0.637228417 0.594966985 0.616097701 0.029883323 Lk6 FBtr0082534|FBtr0082534|FBtr0082534 11750929|11750929|11750929 11752971|11752971|11752971 3R - 11751712 11751867 3'utr Lk6 FlyBase G50256.1 CATACACCTATAATATTTAAAAAATTGTGATATAAAATGTAAATGTAAATGCACCTGAAGAAATCTATCTATCAAATGACGCTGTGCCATCAACAACCACTTCAATCTACTGATAAGAGGAGTATCATTTTCCACAGACCTTATTTGTTTACGTCC 80 11751843 0.981087449 18 76 625 0.955555556 1.457377197 0.022222222 0.1125 0.211111111 80 2 2 86 3R:11751712-11751867 7 Lk6 FBtr0082534|FBtr0082534|FBtr0082534 11750929|11750929|11750929 11752971|11752971|11752971 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 11751745 11751861 3'utr Lk6 FlyBase G37998.1 CCTATAATATTTAAAAAATTGTGATATAAAATGTAAATGTAAATGCACCTGAAGAAATCTATCTATCAAATGACGCTGTGCCATCAACAACCACTTCAATCTACTGATAAGAGGAGT 68 11751843 0.985836117 13 63 524 0.926315789 1.467361417 0 0.308823529 0.505263158 68 5 2 88 3R:11751745-11751861 7 55 2160 FBgn0017581 12415.55667 253.5666667 388.6133333 0.004429926 0.216905482 0.141528855 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 11781589 11781595 - 3R_11781589_11781595_- 0.680991131 0.64308649 0.662038811 0.0268026 CG17360 FBtr0082531|FBtr0082531|FBtr0082531|FBtr0333819|FBtr0333819|FBtr0333819 11781129|11781129|11781129|11781129|11781129|11781129 11781819|11781819|11781819|11781819|11781819|11781819 3R - 11781519 11781658 3'utr CG17360 FlyBase G50296.1 TGCGTGCCTCCGCTTGACTCATTCATTCGTTTGCGCTTAGTAACATCTCATTTGAATAATTTTTGTGATATTAAACTTAAAGTCGCTGATCTTTGGTATGCTCTTTTGTAGGATATTTAGTTTCTATTGATTTTCTACAT 167 11781597 0.910691985 30 153 1641 0.909090909 1.67669361 0.224880383 0.221556886 0.377990431 167 16 3 190 3R:11781519-11781658 7 CG17360 FBtr0333819|FBtr0333819|FBtr0333819|FBtr0082531|FBtr0082531|FBtr0082531 11781129|11781129|11781129|11781129|11781129|11781129 11781819|11781819|11781819|11781819|11781819|11781819 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 11781530 11781663 3'utr CG17360 FlyBase G38028.1 TGTAATGCGTGCCTCCGCTTGACTCATTCATTCGTTTGCGCTTAGTAACATCTCATTTGAATAATTTTTGTGATATTAAACTTAAAGTCGCTGATCTTTGGTATGCTCTTTTGTAGGATATTTAGTTTCTATTG 100 11781597 0.746402167 24 91 974 0.919708029 2.100370545 0.116788321 0.29 0.481751825 100 11 0 126 3R:11781530-11781663 7 57.5 2161 FBgn0037949 382.3133333 8.926666667 13.76333333 0.150400195 6.44137416 4.177767014 2 2 2 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 3R 11789463 11789470 - 3R_11789463_11789470_- 0.640915174 0.643435172 0.642175173 0.001781909 Sbf FBtr0082529|FBtr0082530 11789291|11789291 11789928|11789928 3R - 11789369 11789492 3'utr Sbf FlyBase G50302.1 TATATAGGTTTATAGTGAATTTACCAAAGAATATTCCACCTTTGTTGCGCAATTGAAATGCATTTCTTGATTGCTTCCTTTAAACTAAACCCTATTATTAAACGCTTTCCTTTATTTATACACT 131 11789441 0.874316674 18 123 1075 0.953333333 1.854306042 0.326666667 0.106870229 0.22 131 6 1 143 3R:11789369-11789492 8 Sbf FBtr0082529|FBtr0082530 11789291|11789291 11789928|11789928 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 11789403 11789493 3'utr Sbf FlyBase G38031.1 CTATATAGGTTTATAGTGAATTTACCAAAGAATATTCCACCTTTGTTGCGCAATTGAAATGCATTTCTTGATTGCTTCCTTTAAACTAAAC 64 11789471 0.852379275 16 64 514 1 1.934498451 0.197674419 0.234375 0.430232558 64 0 0 86 3R:11789403-11789493 8 49.5 2162 FBgn0025802 636.01 11.3 17.24 0.077828965 4.380530973 2.871229698 -29 1 -14 0.2 dme-miR-184-5p 6mer3-8 TGATAA 3R 11789576 11789581 - 3R_11789576_11789581_- 0.549476317 0.921375016 0.735425667 0.262972093 Sbf FBtr0082529|FBtr0082530 11789291|11789291 11789928|11789928 3R - 11789545 11789635 3'utr Sbf FlyBase G50303.1 ATGTAAAGAAACTATAAAATTATGTGATTATATAAACAAACAAAAATCAGACTATGATAAATTTACGATAAAATGGAAAAGCCACGCCCGC 27 11789589 0.976840609 9 26 167 0.966666667 1.462397998 0.033333333 0.111111111 0.2 27 1 0 29 3R:11789545-11789635 6 Sbf FBtr0082529|FBtr0082530 11789291|11789291 11789928|11789928 TGATAA 6mer3-8 dme-miR-184-5p 3R - 11789562 11789624 3'utr Sbf FlyBase G38032.1 CTATAAAATTATGTGATTATATAAACAAACAAAAATCAGACTATGATAAATTTACGATAAAAT 14 11789589 0.979362188 7 12 83 0.913043478 1.322219295 0 0.5 0.695652174 14 2 0 21 3R:11789562-11789624 6 9 2163 FBgn0025802 636.01 11.3 17.24 0.014150721 0.796460177 0.522041763 8 8 8 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3R 11789607 11789613 - 3R_11789607_11789613_- 0.434899538 0.315070738 0.374985138 0.084731757 Sbf FBtr0082529|FBtr0082530 11789291|11789291 11789928|11789928 3R - 11789545 11789635 3'utr Sbf FlyBase G50303.1 ATGTAAAGAAACTATAAAATTATGTGATTATATAAACAAACAAAAATCAGACTATGATAAATTTACGATAAAATGGAAAAGCCACGCCCGC 27 11789616 0.976840609 9 26 167 0.966666667 1.462397998 0.033333333 0.111111111 0.2 27 1 0 29 3R:11789545-11789635 7 Sbf FBtr0082529|FBtr0082530 11789291|11789291 11789928|11789928 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 11789562 11789624 3'utr Sbf FlyBase G38032.1 CTATAAAATTATGTGATTATATAAACAAACAAAAATCAGACTATGATAAATTTACGATAAAAT 14 11789589 0.979362188 7 12 83 0.913043478 1.322219295 0 0.5 0.695652174 14 2 0 21 3R:11789562-11789624 7 10.5 2164 FBgn0025802 636.01 11.3 17.24 0.016509174 0.92920354 0.609048724 3 -24 -10.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 11964971 11964978 - 3R_11964971_11964978_- 0.649811111 0.649780409 0.64979576 2.17E-05 CG12213 FBtr0334155|FBtr0334155|FBtr0334155|FBtr0113223|FBtr0113223|FBtr0113223|FBtr0334156|FBtr0334156|FBtr0334156 11964672|11964672|11964672|11964672|11964672|11964672|11964672|11964672|11964672 11965424|11965424|11965424|11965424|11965424|11965424|11965424|11965424|11965424 3R - 11964929 11965003 3'utr CG12213 FlyBase G50394.1 AAATATACTCTATATACTTGGTTTTCTGTGATAAAAATAAACGCTGCGCTGCATTTGGGCAATGTTGCCTGTTTT 304 11964980 0.709617965 17 279 2986 0.915068493 1.62065648 0.046575342 0.151315789 0.293150685 304 24 7 334 3R:11964929-11965003 8 CG12213 FBtr0334156|FBtr0334156|FBtr0334156|FBtr0113223|FBtr0113223|FBtr0113223|FBtr0334155|FBtr0334155|FBtr0334155 11964672|11964672|11964672|11964672|11964672|11964672|11964672|11964672|11964672 11965424|11965424|11965424|11965424|11965424|11965424|11965424|11965424|11965424 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 11964943 11965031 3'utr CG12213 FlyBase G38088.1 TTGCTAAATCCTTACAAGTTTCATTAACAAATATACTCTATATACTTGGTTTTCTGTGATAAAAATAAACGCTGCGCTGCATTTGGGCA 178 11964980 0.692796783 15 163 1662 0.931174089 2.06069784 0.052631579 0.275280899 0.477732794 178 16 1 230 3R:11964943-11965031 8 230.5 2165 FBgn0260742 1391.876667 80.28333333 122.6666667 0.165603753 2.871081586 1.879076087 2 2 2 0.2 dme-miR-14-3p 7mer-m8 AAGACTG 3R 11965085 11965091 - 3R_11965085_11965091_- 0.669039864 0.670610133 0.669824998 0.001110299 CG12213 FBtr0334155|FBtr0113223|FBtr0334156 11964672|11964672|11964672 11965424|11965424|11965424 3R - 11965012 11965152 3'utr CG12213 FlyBase G50395.1 CTCGCAGGAAATACAATACTCTGAGATGGAGCTACGAACAAATGCAGACAGATTTAAAATGAAGACTGTTTCAGTTCTGCCTTGCAAATTATTAGTCCCGAATTAGCAGTAATCGAAATCGTTGCTAAATCCTTACAAGTT 33 11965094 0.974567835 18 32 197 0.977272727 1.633468456 0.113636364 0.272727273 0.454545455 33 1 0 43 3R:11965012-11965152 7 CG12213 FBtr0334156|FBtr0113223|FBtr0334155 11964672|11964672|11964672 11965424|11965424|11965424 AAGACTG 7mer-m8 dme-miR-14-3p 3R - 11965066 11965207 3'utr CG12213 FlyBase G38089.1 AACGTCATGACTACCATCATTTCGTTAATAGCAAATGAAGAACAAGAAATTAAAACTCGCAGGAAATACAATACTCTGAGATGGAGCTACGAACAAATGCAGACAGATTTAAAATGAAGACTGTTTCAGTTCTGCCTTGCAA 23 11965084 0.976204513 13 22 143 0.96875 1.491361694 0.15625 0.347826087 0.53125 23 1 0 31 3R:11965066-11965207 7 11 2166 FBgn0260742 1391.876667 80.28333333 122.6666667 0.007902999 0.137014739 0.089673913 3 -7 -2 0.2 dme-miR-304-5p 6mer3-8 TGAGAT 3R 11965126 11965131 - 3R_11965126_11965131_- 0.996142075 0.905578855 0.950860465 0.064037853 CG12213 FBtr0334155|FBtr0113223|FBtr0334156 11964672|11964672|11964672 11965424|11965424|11965424 3R - 11965012 11965152 3'utr CG12213 FlyBase G50395.1 CTCGCAGGAAATACAATACTCTGAGATGGAGCTACGAACAAATGCAGACAGATTTAAAATGAAGACTGTTTCAGTTCTGCCTTGCAAATTATTAGTCCCGAATTAGCAGTAATCGAAATCGTTGCTAAATCCTTACAAGTT 33 11965131 0.974567835 18 32 197 0.977272727 1.633468456 0.113636364 0.272727273 0.454545455 33 1 0 43 3R:11965012-11965152 6 CG12213 FBtr0334156|FBtr0113223|FBtr0334155 11964672|11964672|11964672 11965424|11965424|11965424 TGAGAT 6mer3-8 dme-miR-304-5p 3R - 11965066 11965207 3'utr CG12213 FlyBase G38089.1 AACGTCATGACTACCATCATTTCGTTAATAGCAAATGAAGAACAAGAAATTAAAACTCGCAGGAAATACAATACTCTGAGATGGAGCTACGAACAAATGCAGACAGATTTAAAATGAAGACTGTTTCAGTTCTGCCTTGCAA 23 11965128 0.976204513 13 22 143 0.96875 1.491361694 0.15625 0.347826087 0.53125 23 1 0 31 3R:11965066-11965207 6 8.5 2167 FBgn0260742 1391.876667 80.28333333 122.6666667 0.006106863 0.105875026 0.069293478 0 -3 -1.5 0.2 dme-miR-305-5p 7mer-m1 GTACAAT 3R 12014686 12014692 + 3R_12014686_12014692_+ 0.765577667 0.762944968 0.764261318 0.0018616 GCC185 FBtr0113224 12014585 12015059 3R + 12014675 12014695 3'utr GCC185 FlyBase G42163.1 CTGTAAATCTTGTACAATTTC 5 12014685 0.607191249 4 5 40 1 0.903089987 0 0.6 0.75 5 0 0 8 3R:12014675-12014695 7 GCC185 FBtr0113224 12014585 12015059 GTACAAT 7mer-m1 dme-miR-305-5p 3R + 12014674 12014696 3'utr GCC185 FlyBase G31820.1 TCTGTAAATCTTGTACAATTTCC 6 12014684 0.670810293 3 5 48 0.875 0.84509804 0 0.333333333 0.5 6 1 0 7 3R:12014674-12014696 7 5.5 2168 FBgn0037979 856.9066667 25.72 39.52333333 0.006418435 0.213841369 0.139158303 1 2 1.5 0.2 dme-bantam-3p 6mer3-8 TGATCT 3R 12015178 12015183 - 3R_12015178_12015183_- 0.975345253 0.979279611 0.977312432 0.00278197 CG3313 FBtr0335433|FBtr0082555 12014941|12014941 12015246|12015246 3R - 12015162 12015199 3'utr CG3313 FlyBase G50438.1 GTAGTTATTCGACTTGTGATCTTTAATCTTTTGGCGCA 33 12015184 0.643515628 5 31 345 0.952380952 1.124938737 0.214285714 0.212121212 0.380952381 33 0 2 40 3R:12015162-12015199 6 CG3313 FBtr0335433|FBtr0082555 12014941|12014941 12015246|12015246 TGATCT 6mer3-8 dme-bantam-3p 3R - 12015163 12015197 3'utr CG3313 FlyBase G38113.1 AGTTATTCGACTTGTGATCTTTAATCTTTTGGCGC 20 12015179 0.615368066 6 18 186 0.961538462 1.397940009 0 0.315789474 0.5 19 1 0 25 3R:12015163-12015197 6 26 2169 FBgn0037980 81.43333333 5.28 7.943333333 0.319279574 4.924242424 3.273185061 1 -4 -1.5 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 12068947 12068954 - 3R_12068947_12068954_- 0.450203635 0.442478676 0.446341156 0.005462329 ATP8B FBtr0339645|FBtr0339646|FBtr0300351|FBtr0307016|FBtr0307015|FBtr0339644|FBtr0339643 12068373|12068373|12068373|12068373|12068373|12068373|12068373 12069582|12069582|12069582|12069582|12069582|12069582|12069582 3R - 12068806 12069119 3'utr ATP8B FlyBase G50444.1 ATACCCAAACTCCTCAAAAAAGCACAAAAATCCCTTCTCGCGTATTTATATCATCGTTGACTGCATTTAAGAGAGTGAGCCCCCTGAATGATTGATTGTGTGGTTGGTTTTGAGGACTTAGAATAGGTTATATTAAGTTTATACTGTCTTTGGGAAACTGAAAGTGTACTTAATTGCTTAAATATGTGCTGTGTGCTTAGCCAATATAACTGCGGTGCTTGCCACCGATCAGAGTAGCTTATCTACAAATAGCTGAACGAACTCTCGTCTCAAAGTCCAATGCTATATGCTATATACCATATACTACCCCCAAC 933 12068955 0.986438504 62 912 7764 0.976525822 2.238882089 0.36713615 0.120042872 0.229107981 933 20 5 1040 3R:12068806-12069119 8 ATP8B FBtr0339643|FBtr0339644|FBtr0307015|FBtr0307016|FBtr0300351|FBtr0339646|FBtr0339645 12068373|12068373|12068373|12068373|12068373|12068373|12068373 12069582|12069582|12069582|12069582|12069582|12069582|12069582 GTACTTAA 8mer-A1 dme-miR-252-5p 3R - 12068886 12069078 3'utr ATP8B FlyBase G38118.1 GTATTTATATCATCGTTGACTGCATTTAAGAGAGTGAGCCCCCTGAATGATTGATTGTGTGGTTGGTTTTGAGGACTTAGAATAGGTTATATTAAGTTTATACTGTCTTTGGGAAACTGAAAGTGTACTTAATTGCTTAAATATGTGCTGTGTGCTTAGCCAATATAACTGCGGTGCTTGCCACCGATCAGAG 720 12068955 0.895378629 40 693 5933 0.964545455 2.071472874 0.398181818 0.375521558 0.591818182 719 31 8 1061 3R:12068886-12069078 8 486 2170 FBgn0037989 9025.686667 173.8733333 265.4733333 0.053846319 2.795138223 1.830692348 1 1 1 0.2 "dme-miR-995-3p,dme-miR-998-3p" 6mer2-7 GGTGCT 3R 12069565 12069570 - 3R_12069565_12069570_- 0.97571958 0.953752303 0.964735941 0.015533227 ATP8B FBtr0339645|FBtr0339646|FBtr0300351|FBtr0307016|FBtr0307015|FBtr0339644|FBtr0339643 12068373|12068373|12068373|12068373|12068373|12068373|12068373 12069582|12069582|12069582|12069582|12069582|12069582|12069582 3R - 12069497 12069722 stop_codon ATP8B FlyBase G50447.1 AGAACCAAAACCACTCGTCGATGGCAGACATAACGGCCGATGGGCGGGGCAATGGGGGAGATGATGGCAGAGGAAGTGGAGGCTCAGATGATATGAGTCCTCGTGCTCCCTGCCAGGACCTGGATACGATTAATCTCTAAGCTTTAGATGCAGGTGCTGGATCGGTAGCGGGTTTAGTAACAAACACCAAAAACTATAGGGAATTTAAGTTAGCGAACACTAAGAT 203 12069593 0.977334803 31 166 1161 0.82278481 1.68797462 0.23628692 0.142857143 0.265822785 203 39 3 195 3R:12069497-12069722 6 ATP8B FBtr0339643|FBtr0339644|FBtr0307015|FBtr0307016|FBtr0300351|FBtr0339646|FBtr0339645 12068373|12068373|12068373|12068373|12068373|12068373|12068373 12069582|12069582|12069582|12069582|12069582|12069582|12069582 GGTGCT 6mer2-7 "dme-miR-995-3p,dme-miR-998-3p" 3R - 12069480 12069694 stop_codon ATP8B FlyBase G38122.1 CATAACGGCCGATGGGCGGGGCAATGGGGGAGATGATGGCAGAGGAAGTGGAGGCTCAGATGATATGAGTCCTCGTGCTCCCTGCCAGGACCTGGATACGATTAATCTCTAAGCTTTAGATGCAGGTGCTGGATCGGTAGCGGGTTTAGTAACAAACACCAAAAACTATAGGGAATTTAAGTTAGCGAACACTAAGATAAGGATTTAAGTTTTAT 140 12069593 0.978811119 36 118 804 0.848780488 1.939519253 0.258536585 0.378571429 0.575609756 140 30 1 174 3R:12069480-12069694 6 75.5 2171 FBgn0037989 9025.686667 173.8733333 265.4733333 0.008365015 0.434224148 0.28439768 23 23 23 0.2 dme-miR-965-3p 7mer-A1 ACGCTTA 3R 12411560 12411566 + 3R_12411560_12411566_+ 0.823345952 0.814165148 0.81875555 0.006491877 CG5196 FBtr0082585|FBtr0082584 12411468|12411468 12411768|12411768 3R + 12411491 12411594 3'utr CG5196 FlyBase G42196.1 TCGATGGCATTCTGTGCCACATTCGGCTTGTATATAGAATTAGATTCCGCTTGGAGACTCGACTGTTTAACGCTTAGCCAGGCCGTCATCCCGTTTACTCTGTT 63 12411557 0.666139571 14 57 417 0.930555556 1.826074803 0.180555556 0.111111111 0.222222222 63 5 0 67 3R:12411491-12411594 7 CG5196 FBtr0082585|FBtr0082584 12411468|12411468 12411768|12411768 ACGCTTA 7mer-A1 dme-miR-965-3p 3R + 12411512 12411562 3'utr CG5196 FlyBase G31842.1 TTCGGCTTGTATATAGAATTAGATTCCGCTTGGAGACTCGACTGTTTAACG 42 12411556 0.968215978 7 39 266 0.956521739 1.819543936 0.072463768 0.523809524 0.710144928 42 3 0 66 3R:12411512-12411562 3 20.5 2172 FBgn0038039 509 36.03 54.94 0.040275049 0.568970303 0.373134328 3 4 3.5 0.2 dme-miR-33-5p 8mer-A1 CAATGCAA 3R 12421149 12421156 + 3R_12421149_12421156_+ 0.631348709 0.619062382 0.625205546 0.008687726 pps FBtr0304744|FBtr0082586 12420906|12420906 12421251|12421251 3R + 12421110 12421214 3'utr pps FlyBase G42215.1 AACCCGCCCCGAGCTCCAAATGGATCATCCTTCGCATTGCAATGCAAATTTAGATTCGGTTTTTACATTACGCTCTAACAAATCGTGTACATTTCCTCCGAAAAT 41 12421146 0.985695043 12 40 335 1 1.672097858 0.042553191 0.146341463 0.255319149 41 0 0 47 3R:12421110-12421214 8 pps FBtr0304744|FBtr0082586 12420906|12420906 12421251|12421251 CAATGCAA 8mer-A1 dme-miR-33-5p 3R + 12421124 12421190 3'utr pps FlyBase G31855.1 TCCAAATGGATCATCCTTCGCATTGCAATGCAAATTTAGATTCGGTTTTTACATTACGCTCTAACAA 25 12421145 0.776797677 10 24 214 0.911764706 1.491361694 0.176470588 0.28 0.470588235 25 3 0 31 3R:12421124-12421190 8 19.5 2173 FBgn0082831 827.4033333 14.92333333 22.97333333 0.023567708 1.306678579 0.848810215 3 4 3.5 0.2 dme-miR-79-3p 6mer2-7 AGCTTT 3R 12458370 12458375 + 3R_12458370_12458375_+ 0.949729284 0.999998348 0.974863816 0.035545551 trus FBtr0082634 12458206 12458444 3R + 12458309 12458386 3'utr trus FlyBase G42260.1 AAAGCTAAGCTTCTCGATTGTCCTAGGAAGATTTTATGCTCTAGTTGTTAAGAACGTTGTAAGCTTTTAGACACTCCA 10 12458367 0.987154186 8 9 81 1 1 0.1 0 0 10 0 0 10 3R:12458309-12458386 6 trus FBtr0082634 12458206 12458444 AGCTTT 6mer2-7 dme-miR-79-3p 3R + 12458358 12458386 3'utr trus FlyBase G31901.1 AAGAACGTTGTAAGCTTTTAGACACTCCA 6 12458376 0.858390259 4 6 35 1 0.77815125 0 0 0 6 0 0 6 3R:12458358-12458386 6 4.5 2174 FBgn0038055 142.6666667 10.03 15.44333333 0.031542056 0.448654038 0.29138787 3 -6 -1.5 0.2 dme-bantam-3p 6mer3-8 TGATCT 3R 12511283 12511288 + 3R_12511283_12511288_+ 0.932248626 0.981972398 0.957110512 0.035160036 Hsp70Bc FBtr0082638 12511242 12511461 3R + 12511258 12511363 3'utr Hsp70Bc FlyBase G42295.1 TTATTTCGGCTTAAGTTTTTAAAAGTGATCTTAATAGTTGAGTGCCATAAAAAAATGTACATATCTTCAACTATAGTATTATACTCATATGTTAGCAACCCATTGT 190 12511283 0.842225106 22 173 1799 0.915178571 2.311753861 0.375 0.136842105 0.267857143 190 19 0 205 3R:12511258-12511363 6 Hsp70Bc FBtr0082638 12511242 12511461 TGATCT 6mer3-8 dme-bantam-3p 3R + 12511262 12511417 3'utr Hsp70Bc FlyBase G31924.1 TTCGGCTTAAGTTTTTAAAAGTGATCTTAATAGTTGAGTGCCATAAAAAAATGTACATATCTTCAACTATAGTATTATACTCATATGTTAGCAACCCATTGTTTTAACTACAAATAATAGCAAAAATAATAATAAATGCAATACTCTTAAGCATTA 115 12511283 0.851973 25 102 1017 0.886904762 1.696065014 0.291666667 0.339130435 0.547619048 115 17 2 149 3R:12511262-12511417 6 115 2175 FBgn0013279 309.6566667 15.58666667 23.73666667 0.371379054 7.378100941 4.844825165 0 0 0 0.2 dme-miR-33-5p 8mer-A1 CAATGCAA 3R 12629492 12629499 + 3R_12629492_12629499_+ 0.622689872 0.611438161 0.617064016 0.007956153 Snx3 FBtr0082642|FBtr0082641 12629451|12629451 12630495|12630061 3R + 12629305 12629529 stop_codon Snx3 FlyBase G42297.1 CATCGAGGAGCGGCGCAAGGGACTGGAGGCCTTCATCAACAAGATAGCCGGACATCCGCTGGCGCAGAACGAGCGCTGCCTGCATATGTTCCTGCAGGAGAATGTCATAGATAAGAACTACGTGCCCGGCAAGATTCGGAACACATAAGCAGCTTAGTCCGGCGCAATCGAAACCCCCTAACCATAGCAATGCAATGAAGCAAAAACTCGAACGAACAAACCTGC 50 12629489 0.919818627 17 48 163 0.980769231 1.40654018 0.326923077 0.04 0.076923077 50 0 1 51 3R:12629305-12629529 8 Snx3 FBtr0082642|FBtr0082641 12629451|12629451 12630495|12630061 CAATGCAA 8mer-A1 dme-miR-33-5p 3R + 12629376 12629667 stop_codon Snx3 FlyBase G31927.1 AGCGCTGCCTGCATATGTTCCTGCAGGAGAATGTCATAGATAAGAACTACGTGCCCGGCAAGATTCGGAACACATAAGCAGCTTAGTCCGGCGCAATCGAAACCCCCTAACCATAGCAATGCAATGAAGCAAAAACTCGAACGAACAAACCTGCTACGAAATCTTTATGGGAAGCCGTGTGAATGTGTGTGCTTGCCCGGATTGGAGGAGGATGGAGCAGATGAGCGATGATGTAGGTTGGTGGAGAAGGGATCTGTTATGCGACGCGATACGAGGCGGGAAGTGCTGCTGC 49 12629500 0.949701721 27 46 196 0.974025974 1.875061263 0.324675325 0.448979592 0.649350649 49 2 0 75 3R:12629376-12629667 8 11 2176 FBgn0038065 1577.186667 135.3066667 207.25 0.006974444 0.081296807 0.053075995 3 -8 -2.5 0.2 dme-miR-980-3p 6mer2-7 GCAGCT 3R 12704567 12704572 + 3R_12704567_12704572_+ 0.988382471 0.99211075 0.99024661 0.002636236 Past1 FBtr0082655 12704080 12704875 3R + 12704398 12704631 3'utr Past1 FlyBase G42337.1 AAAGCAGGATGTAGAGTAGCAGCCTAGTGGAATAAGACAAGGAGTGTGTGTTAAGCGCCTAATTGTCATTGTTGACTTAAGGAAAGTGAAGTGTGGATAAACAATTGTTCAATGCCAATGAAAAAAGCATGAGTTAAACTGTATACAATATCTAGGTTAATGTCGATGTGCAGCTTGAAGGGCCATTAATTTGCAATCGTACCACTTTTGATACACAATAAATGTATTTTTGTT 473 12704564 0.976979186 34 459 3347 0.971751412 2.411619706 0.199623352 0.109936575 0.207156309 473 14 1 516 3R:12704398-12704631 6 Past1 FBtr0082655 12704080 12704875 GCAGCT 6mer2-7 dme-miR-980-3p 3R + 12704388 12704616 3'utr Past1 FlyBase G31961.1 AATCGATTGTAAAGCAGGATGTAGAGTAGCAGCCTAGTGGAATAAGACAAGGAGTGTGTGTTAAGCGCCTAATTGTCATTGTTGACTTAAGGAAAGTGAAGTGTGGATAAACAATTGTTCAATGCCAATGAAAAAAGCATGAGTTAAACTGTATACAATATCTAGGTTAATGTCGATGTGCAGCTTGAAGGGCCATTAATTTGCAATCGTACCACTTTTGATACACAAT 317 12704564 0.978762787 25 307 2085 0.965092402 1.973127854 0.170431211 0.372239748 0.59137577 317 13 4 470 3R:12704388-12704616 6 319 2177 FBgn0016693 1355.16 61.20333333 93.61666667 0.235396558 5.212134415 3.407512907 3 3 3 0.2 dme-miR-34-5p 6mer2-7 ACTGCC 3R 12704760 12704765 + 3R_12704760_12704765_+ 0.995550853 0.999855196 0.997703025 0.0030436 Past1 FBtr0082655 12704080 12704875 3R + 12704742 12704809 3'utr Past1 FlyBase G42339.1 AAGAGAAACGTGCAATTTACTGCCTGTGCTTCGACTATTTTGTAATTAGTGAATTCTTGAATATTAAA 14 12704777 0.901953916 10 14 127 1 1.380211242 0.083333333 0.357142857 0.625 14 0 0 24 3R:12704742-12704809 6 Past1 FBtr0082655 12704080 12704875 ACTGCC 6mer2-7 dme-miR-34-5p 3R + 12704747 12704777 3'utr Past1 FlyBase G31962.1 AAACGTGCAATTTACTGCCTGTGCTTCGACT 8 12704759 0.611920348 6 8 59 1 1.041392685 0.181818182 0.375 0.545454545 8 0 0 11 3R:12704747-12704777 6 9 2178 FBgn0016693 1355.16 61.20333333 93.61666667 0.006641282 0.147050814 0.096136728 -17 1 -8 0.2 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 12705588 12705595 - 3R_12705588_12705595_- 0.631123538 0.631030236 0.631076887 6.60E-05 mus308 FBtr0082662 12705521 12705670 3R - 12705527 12705658 3'utr mus308 FlyBase G50655.1 TTTTATAGATTTGTAATCAATTTGTTTAAAGACTGAATGTTTTAGGACTGCTTGGCCTGCCACTCCGTCCATGATCCGGCATAAGCCTTGGCGCTGCAATTGATTAATAAATAATTGTACATATCTTTTAAA 210 12705595 0.982086269 23 192 1423 0.905882353 1.886490725 0.101960784 0.19047619 0.333333333 210 22 2 231 3R:12705527-12705658 8 mus308 FBtr0082662 12705521 12705670 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R - 12705560 12705653 3'utr mus308 FlyBase G38284.1 TAGATTTGTAATCAATTTGTTTAAAGACTGAATGTTTTAGGACTGCTTGGCCTGCCACTCCGTCCATGATCCGGCATAAGCCTTGGCGCTGCAA 136 12705595 0.732745538 20 126 897 0.923423423 2.010723865 0.207207207 0.463235294 0.671171171 136 16 1 205 3R:12705560-12705653 8 104 2179 FBgn0002905 561.1366667 10.60333333 16.29666667 0.185338094 9.808236404 6.381673144 0 0 0 0.2 dme-miR-283-5p 6mer2-7 GATATT 3R 12713187 12713192 - 3R_12713187_12713192_- 0.606408335 0.617301628 0.611854981 0.007702726 Men FBtr0082661|FBtr0330025|FBtr0082660 12713101|12713101|12713101 12713471|12713471|12713471 3R - 12713143 12713251 3'utr Men FlyBase G50663.1 AAATGGAATGTCATCAGCTTGCGGCGCGCGATTTTGTATAATGCTAACTATGTAAATGGGATATTGATCTAATAGATATGTAAACAAATTTTATGTAATCTTGAACAAC 818 12713188 0.760165803 21 802 6506 0.979360165 2.375206221 0.682146543 0.163814181 0.294117647 818 17 3 949 3R:12713143-12713251 6 Men FBtr0330025|FBtr0082660|FBtr0082661 12713101|12713101|12713101 12713471|12713471|12713471 GATATT 6mer2-7 dme-miR-283-5p 3R - 12713157 12713244 3'utr Men FlyBase G38290.1 ATGTCATCAGCTTGCGGCGCGCGATTTTGTATAATGCTAACTATGTAAATGGGATATTGATCTAATAGATATGTAAACAAATTTTATG 494 12713188 0.771595117 19 479 3950 0.974160207 2.57634135 0.666666667 0.410931174 0.624031008 494 19 1 754 3R:12713157-12713244 6 636 2180 FBgn0002719 1553 77.69 118.1366667 0.409529942 8.186381774 5.383595271 -4 -4 -4 0.2 dme-miR-305-3p 7mer-A1 TGTGCCA 3R 12950172 12950178 - 3R_12950172_12950178_- 0.780001643 0.728911828 0.754456736 0.036125944 grsm FBtr0082730|FBtr0344095 12950040|12950040 12950195|12950195 3R - 12950139 12950213 stop_codon grsm FlyBase G50683.1 CGCTGGTGCCGCGATTAACTCAGCCTGCCTTTTACTGTGCCACGTGCCTGACTGGATTAACATTTCCATCATTTT 16 12950183 0.982459633 11 14 107 0.842105263 0.726998728 0.315789474 0.1875 0.315789474 16 1 2 16 3R:12950139-12950213 7 grsm FBtr0082730|FBtr0344095 12950040|12950040 12950195|12950195 TGTGCCA 7mer-A1 dme-miR-305-3p 3R - 12950154 12950209 stop_codon grsm FlyBase G38306.1 GGTGCCGCGATTAACTCAGCCTGCCTTTTACTGTGCCACGTGCCTGACTGGATTAA 10 12950195 0.988853232 5 8 64 0.764705882 0.812913357 0.411764706 0.5 0.705882353 10 3 1 13 3R:12950154-12950209 7 4 2181 FBgn0040493 1111.996667 68.50333333 104.3933333 0.003597133 0.058391319 0.038316623 5 17 11 0.2 dme-miR-304-5p 7mer-m8 TGAGATT 3R 12984373 12984379 + 3R_12984373_12984379_+ 0.590017406 0.595784235 0.592900821 0.004077743 Paip2 FBtr0082693 12984239 12985488 3R + 12984113 12984480 stop_codon Paip2 FlyBase G42354.1 CGGACGAGCAGAACACGGCACTTTCCGCACTACCCAAGAGCCAGTGTGATGTTGAAAAGTCTGTTCTGAATCCGATGGCTGATGAGTTTGTTCCGCGTTGTCATGTTATAGATTTCCCTGCCTCATAAAGCCAGCCCATATCTCCTGCCCGCCACAGAATCACAAACTACCCCGAACCCGTACCACGTGGACCTCATACGCGAAAAACCTTAGATAAACTGAAGACCCATTGCTAAGACTAGACTAACAGATTCCGCTAATGAGATTGATATTGATATTCTGACCAAGTTGAGCCAGATGGAGCATTGGGAGCAGTGGCTCATGAATATCTTATTTCTAGATACCAAAATGCTGGAAAAGAAAACTAA 582 12984373 0.96967329 55 560 3164 0.964285714 1.829303773 0.205714286 0.161512027 0.302857143 582 16 9 675 3R:12984113-12984480 7 Paip2 FBtr0082693 12984239 12985488 TGAGATT 7mer-m8 dme-miR-304-5p 3R + 12984213 12984483 stop_codon Paip2 FlyBase G31972.1 TCATGTTATAGATTTCCCTGCCTCATAAAGCCAGCCCATATCTCCTGCCCGCCACAGAATCACAAACTACCCCGAACCCGTACCACGTGGACCTCATACGCGAAAAACCTTAGATAAACTGAAGACCCATTGCTAAGACTAGACTAACAGATTCCGCTAATGAGATTGATATTGATATTCTGACCAAGTTGAGCCAGATGGAGCATTGGGAGCAGTGGCTCATGAATATCTTATTTCTAGATACCAAAATGCTGGAAAAGAAAACTAAATA 347 12984373 0.948630023 33 333 1728 0.954022989 2.220108088 0.168582375 0.342939481 0.563218391 347 22 2 498 3R:12984213-12984483 7 158.5 2182 FBgn0038100 1800.366667 110.8333333 168.6533333 0.088037622 1.430075188 0.939797612 0 0 0 0.2 dme-miR-999-3p 6mer2-7 GTTAAC 3R 12985120 12985125 + 3R_12985120_12985125_+ 0.999932137 0.999941694 0.999936915 6.79E-06 Paip2 FBtr0082693 12984239 12985488 3R + 12985061 12985184 3'utr Paip2 FlyBase G42357.1 TAATCTTTCACCATTGTTAACTCGTTGTACGTTCTATGCCCAAGTAACAAGAAGCGCTTGTTAACCTTCCCTACTGACTCGCAATATTTGTAATTTACCAATATAATCTAGTGAACTAAACGAA 62 12985127 0.754702992 16 60 435 0.974025974 1.875061263 0.155844156 0.177419355 0.337662338 62 2 0 75 3R:12985061-12985184 6 Paip2 FBtr0082693 12984239 12985488 GTTAAC 6mer2-7 dme-miR-999-3p 3R + 12985065 12985151 3'utr Paip2 FlyBase G31974.1 CTTTCACCATTGTTAACTCGTTGTACGTTCTATGCCCAAGTAACAAGAAGCGCTTGTTAACCTTCCCTACTGACTCGCAATATTTGT 39 12985128 0.979524652 12 39 271 1 1.77815125 0.033333333 0.435897436 0.633333333 39 0 0 60 3R:12985065-12985151 6 37 2183 FBgn0038100 1800.366667 110.8333333 168.6533333 0.020551369 0.333834586 0.219384932 -7 -8 -7.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 12985241 12985246 + 3R_12985241_12985246_+ 0.980504637 0.890206127 0.935355382 0.063850682 Paip2 FBtr0082693 12984239 12985488 3R + 12985192 12985305 3'utr Paip2 FlyBase G42358.1 ACTAATGTTTAACGCCTCTTTATACAAACATCATGCATAAATATGTATATCTAGTGTTAATGGAGGAGACAACAGACAACAACAACGCTGCAATAACAAGTAGTTTGTAATTTT 47 12985251 0.951726401 13 44 247 0.944444444 1.707570176 0.111111111 0.14893617 0.259259259 47 3 0 51 3R:12985192-12985305 6 Paip2 FBtr0082693 12984239 12985488 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 12985192 12985305 3'utr Paip2 FlyBase G31975.1 ACTAATGTTTAACGCCTCTTTATACAAACATCATGCATAAATATGTATATCTAGTGTTAATGGAGGAGACAACAGACAACAACAACGCTGCAATAACAAGTAGTTTGTAATTTT 55 12985252 0.961866216 11 43 292 0.811764706 1.537819095 0.070588235 0.381818182 0.6 55 15 1 69 3R:12985192-12985305 6 15.5 2184 FBgn0038100 1800.366667 110.8333333 168.6533333 0.008609357 0.139849624 0.091904498 -10 -11 -10.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 12985473 12985479 + 3R_12985473_12985479_+ 0.724168289 0.721109811 0.72263905 0.002162686 Paip2 FBtr0082693|FBtr0082693|FBtr0082693 12984239|12984239|12984239 12985488|12985488|12985488 3R + 12985356 12985494 3'utr Paip2 FlyBase G42359.1 AATATCGTTAAAATTCGTTTCGGCATGTAGACAAAGATGAATTTCTATTTTTTCAATCAACTTAGATTTAGTGACTTAAGACAGCATTATAAGATCTACTACATTACTTACGTTACGTGTGATATAAAGATACAAAAAA 266 12985468 0.985411281 29 227 1871 0.847560976 1.745074792 0.176829268 0.203007519 0.353658537 266 46 4 278 3R:12985356-12985494 7 Paip2 FBtr0082693|FBtr0082693|FBtr0082693 12984239|12984239|12984239 12985488|12985488|12985488 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 12985409 12985493 3'utr Paip2 FlyBase G31976.2 CAATCAACTTAGATTTAGTGACTTAAGACAGCATTATAAGATCTACTACATTACTTACGTTACGTGTGATATAAAGATACAAAAA 179 12985468 0.692630658 20 160 1228 0.891525424 1.942834494 0.183050847 0.430167598 0.654237288 179 30 2 263 3R:12985409-12985493 7 167.5 2185 FBgn0038100 1800.366667 110.8333333 168.6533333 0.093036604 1.511278195 0.993161515 5 5 5 0.2 dme-miR-965-3p 6mer3-8 TACGCT 3R 12990268 12990273 + 3R_12990268_12990273_+ 0.999811462 0.805557354 0.902684408 0.137358391 CG31342 FBtr0113404 12990027 12991543 3R + 12990256 12990278 3'utr-intron CG31342 FlyBase G42376.1 AAGGAACACCAATACGCTATTTG 14 12990268 0.933052288 3 12 58 0.857142857 0.77815125 0.428571429 0 0 14 1 1 12 3R:12990256-12990278 6 CG31342 FBtr0113404 12990027 12991543 TACGCT 6mer3-8 dme-miR-965-3p 3R + 12990248 12990279 3'utr-intron CG31342 FlyBase G31995.1 AAGATAATAAGGAACACCAATACGCTATTTGT 10 12990268 0.957266759 3 9 43 0.933333333 1.146128036 0.333333333 0.5 0.666666667 10 1 0 14 3R:12990248-12990279 6 12 2186 FBgn0051342 1698.813333 51.87 79.48333333 0.007063754 0.2313476 0.150975047 0 0 0 0.2 dme-miR-7-5p 7mer-m8 GTCTTCC 3R 12990486 12990492 + 3R_12990486_12990492_+ 0.393940222 0.400212618 0.39707642 0.004435257 CG31342 FBtr0113404 12990027 12991543 3R + 12990468 12990499 3'utr CG31342 FlyBase G42378.1 GTTTGGCTGCACGTCACGGTCTTCCGCCCAAG 28 12990489 0.723575395 2 27 141 0.9375 1 0.71875 0.142857143 0.25 28 0 2 30 3R:12990468-12990499 7 CG31342 FBtr0113404 12990027 12991543 GTCTTCC 7mer-m8 dme-miR-7-5p 3R + 12990438 12990499 3'utr CG31342 FlyBase G31997.1 CTTCGACAATCGTGGATGTGGTGCCAAATAGTTTGGCTGCACGTCACGGTCTTCCGCCCAAG 10 12990489 0.780740184 4 10 56 1 1.255272505 0.444444444 0.7 0.833333333 10 0 0 18 3R:12990438-12990499 7 17 2187 FBgn0051342 1698.813333 51.87 79.48333333 0.010006985 0.327742433 0.213881317 -3 -3 -3 0.2 dme-miR-252-5p 7mer-m1 TACTTAG 3R 12990754 12990760 + 3R_12990754_12990760_+ 0.65955791 0.698004251 0.67878108 0.02718571 CG31342 FBtr0113404 12990027 12991543 3R + 12990631 12990771 stop_codon CG31342 FlyBase G42380.1 AAGGATTTCGAGATACGCGACCGCCTGAACTCCGTGGGACGCGATATATCCATTTTGGTGCAACCGTCGGATTTGATAACCAAGCTGAAAAAGCAGCTGAAGTCGCTGCGCGGCTACAAGGATTACTTAGTGCAGTAGTCA 36 12990753 0.965213092 13 33 200 0.931818182 1.612783857 0.318181818 0.222222222 0.363636364 36 3 0 41 3R:12990631-12990771 7 CG31342 FBtr0113404 12990027 12991543 TACTTAG 7mer-m1 dme-miR-252-5p 3R + 12990673 12990818 stop_codon CG31342 FlyBase G31999.1 GATATATCCATTTTGGTGCAACCGTCGGATTTGATAACCAAGCTGAAAAAGCAGCTGAAGTCGCTGCGCGGCTACAAGGATTACTTAGTGCAGTAGTCACTAGCTATAACGAACGATTCCATATAACCACAAATAACTCTCAACTG 42 12990754 0.892877914 17 36 207 0.85483871 0.821185883 0.209677419 0.357142857 0.564516129 42 2 7 53 3R:12990673-12990818 7 17 2188 FBgn0051342 1698.813333 51.87 79.48333333 0.010006985 0.327742433 0.213881317 1 0 0.5 0.2 dme-miR-1002-5p 8mer-A1 CTACTTAA 3R 12990985 12990992 + 3R_12990985_12990992_+ 0.383590644 0.314845348 0.349217996 0.048610268 CG31342 FBtr0113404|FBtr0113403 12990027|12990767 12991543|12991543 3R + 12990936 12991080 3'utr CG31342 FlyBase G42383.1 TTTCGCTATATTACGTACTACACACTACATATATTAACTATGATCGAAACTACTTAAAGGACTTAGGTGTAGCGTTGAGGAACATATACAAAAGCAACCTATATATTTTTTGCAAAACTTTATATAAACTCGTACATATATATAC 45 12990988 0.647602234 21 42 302 0.93220339 1.740362689 0.118644068 0.244444444 0.423728814 45 4 0 55 3R:12990936-12991080 8 CG31342 FBtr0113403|FBtr0113404 12990767|12990027 12991543|12991543 CTACTTAA 8mer-A1 dme-miR-1002-5p 3R + 12990938 12991086 3'utr CG31342 FlyBase G32001.1 TCGCTATATTACGTACTACACACTACATATATTAACTATGATCGAAACTACTTAAAGGACTTAGGTGTAGCGTTGAGGAACATATACAAAAGCAACCTATATATTTTTTGCAAAACTTTATATAAACTCGTACATATATATACAAATTG 34 12990976 0.975967789 20 32 213 0.966101695 1.45484486 0.254237288 0.588235294 0.762711864 34 1 1 57 3R:12990938-12991086 8 21 2189 FBgn0051342 1698.813333 51.87 79.48333333 0.01236157 0.4048583 0.264206333 -3 9 3 0.2 dme-miR-999-3p 7mer-A1 GTTAACA 3R 12991234 12991240 + 3R_12991234_12991240_+ 0.809604169 0.81409861 0.811851389 0.003178021 CG31342 FBtr0113404|FBtr0113403 12990027|12990767 12991543|12991543 3R + 12991173 12991247 3'utr CG31342 FlyBase G42385.1 GAATTTGTTTAGATGCGGAAAAGTTATGAGAAATTTACAACATGAAATTCAAGTATTTTAGGTTAACATATACAC 232 12991230 0.977655096 13 231 2038 0.996183206 2.416640507 0.049618321 0.099137931 0.202290076 232 1 0 261 3R:12991173-12991247 7 CG31342 FBtr0113403|FBtr0113404 12990767|12990027 12991543|12991543 GTTAACA 7mer-A1 dme-miR-999-3p 3R + 12991168 12991251 3'utr CG31342 FlyBase G32003.1 ACCTCGAATTTGTTTAGATGCGGAAAAGTTATGAGAAATTTACAACATGAAATTCAAGTATTTTAGGTTAACATATACACGCGT 187 12991230 0.904181126 12 181 1610 0.971631206 1.738780558 0.042553191 0.368983957 0.581560284 187 4 4 274 3R:12991168-12991251 7 184.5 2190 FBgn0051342 1698.813333 51.87 79.48333333 0.108605222 3.556969346 2.32124135 4 4 4 0.2 dme-miR-79-3p 6mer2-7 AGCTTT 3R 12996927 12996932 - 3R_12996927_12996932_- 0.987508185 0.967074577 0.977291381 0.014448737 CG44194 FBtr0336814|FBtr0344448 12996874|12996874 12997324|12997324 3R - 12996879 12997108 3'utr CG44194 FlyBase G50704.1 GCGCGTGGACAACTTCGAGCAGCTAAACTCCCTGGAGCGACAGGCCCAAGAGTCGAACGTGGTGGCCGCCTTGGTGAGGGATGCCGGGCGCACTCAGCTGGAATCTGGGACAGCAACGGTCCTCGGACTGGGTCCAGCCCCTGCCGAAGATCTAGACAAATTGGTGGCGCATTTGAAGCTTTTGTGAACTCTTAGGTTTATGCAACGTTACAAATAAAGTACAAGTAATC 448 12996917 0.991141742 31 429 4519 0.964552239 1.868392503 0.235074627 0.171875 0.307835821 448 13 6 517 3R:12996879-12997108 6 CG44194 FBtr0344448|FBtr0336814 12996874|12996874 12997324|12997324 AGCTTT 6mer2-7 dme-miR-79-3p 3R - 12996876 12996994 3'utr CG44194 FlyBase G38319.1 AACGGTCCTCGGACTGGGTCCAGCCCCTGCCGAAGATCTAGACAAATTGGTGGCGCATTTGAAGCTTTTGTGAACTCTTAGGTTTATGCAACGTTACAAATAAAGTACAAGTAATCAAC 280 12996917 0.834872537 21 271 2728 0.96882494 2.606381365 0.24940048 0.360714286 0.570743405 280 13 0 404 3R:12996876-12996994 6 328 2191 FBgn0265083 203.1666667 36.95 56.61333333 1.614438064 8.876860622 5.793688177 -15 -15 -15 0.2 dme-bantam-3p 8mer-A1 TGATCTCA 3R 13022979 13022986 + 3R_13022979_13022986_+ 0.631133414 0.631136023 0.631134719 1.84E-06 CtBP FBtr0334513|FBtr0082700|FBtr0082702|FBtr0082699 13021676|13021676|13021676|13021676 13024097|13024097|13024097|13024097 3R + 13022943 13023009 3'utr CtBP FlyBase G42481.1 TATTCTGTTGCTCAAGCTCTGCTCTAATTTACAATATGATCTCATCATTCAAGTTTATTTTCGCCTT 84 13022978 0.759827641 12 81 734 0.973684211 2.045322979 0 0.261904762 0.456140351 84 3 0 111 3R:13022943-13023009 8 CtBP FBtr0082702|FBtr0082699|FBtr0334513|FBtr0082700 13021676|13021676|13021676|13021676 13024097|13024097|13024097|13024097 TGATCTCA 8mer-A1 dme-bantam-3p 3R + 13022944 13023006 3'utr CtBP FlyBase G32078.1 ATTCTGTTGCTCAAGCTCTGCTCTAATTTACAATATGATCTCATCATTCAAGTTTATTTTCGC 63 13022978 0.735181047 11 61 538 0.979381443 1.977723605 0 0.380952381 0.597938144 63 2 0 95 3R:13022944-13023006 8 68 2192 FBgn0020496 3905.446667 142.2566667 217.6 0.017411581 0.478009232 0.3125 1 1 1 0.2 dme-miR-2b-2-5p 6mer2-7 TGAAGA 3R 13025506 13025511 + 3R_13025506_13025511_+ 0.995657593 0.999993703 0.997825648 0.003066086 CtBP FBtr0334515|FBtr0334516|FBtr0100161|FBtr0334517|FBtr0334514 13025471|13025410|13025471|13025471|13025471 13026275|13026275|13026275|13026275|13026275 3R + 13025471 13025562 stop_codon CtBP FlyBase G42494.1 AGGCATCTGCTGTCCAACTGGCTGCACCTGAGAGCTGAAGAGCTGGAGTTGACGATGACAACGGGCAGTGGCGCAATGGAGTCCAGCACACA 33 13025498 0.871761709 11 33 126 1 1.556302501 0.5 0.090909091 0.166666667 33 0 0 36 3R:13025471-13025562 6 CtBP FBtr0334517|FBtr0334514|FBtr0334515|FBtr0334516|FBtr0100161 13025471|13025471|13025471|13025410|13025471 13026275|13026275|13026275|13026275|13026275 TGAAGA 6mer2-7 dme-miR-2b-2-5p 3R + 13025472 13025522 3'utr CtBP FlyBase G32087.1 GGCATCTGCTGTCCAACTGGCTGCACCTGAGAGCTGAAGAGCTGGAGTTGA 15 13025505 0.850097209 4 15 62 1 1.322219295 0.523809524 0.4 0.571428571 15 0 0 21 3R:13025472-13025522 6 17.5 2193 FBgn0020496 3905.446667 142.2566667 217.6 0.004480922 0.123017082 0.080422794 8 1 4.5 0.2 dme-miR-995-5p 7mer-m8 AATTCGG 3R 13025648 13025654 + 3R_13025648_13025654_+ 0.427198272 0.547736122 0.487467197 0.085233096 CtBP FBtr0334515|FBtr0334516|FBtr0100161|FBtr0334517|FBtr0334514 13025471|13025410|13025471|13025471|13025471 13026275|13026275|13026275|13026275|13026275 3R + 13025593 13025684 3'utr CtBP FlyBase G42495.1 GAGGAGGAGGAGTAGGCGGCGTAGTACGAGCATTGTGGAGCAGTAGACCCCATGGAATTCGGTCCCCAAGGATAAAACTTAACGAGAAACAA 16 13025650 0.957682406 6 14 67 0.857142857 1.255272505 0.19047619 0.25 0.428571429 16 3 0 18 3R:13025593-13025684 7 CtBP FBtr0334517|FBtr0334514|FBtr0334515|FBtr0334516|FBtr0100161 13025471|13025471|13025471|13025410|13025471 13026275|13026275|13026275|13026275|13026275 AATTCGG 7mer-m8 dme-miR-995-5p 3R + 13025625 13025659 3'utr CtBP FlyBase G32088.1 TTGTGGAGCAGTAGACCCCATGGAATTCGGTCCCC 10 13025650 0.726968154 5 9 34 0.941176471 1.204119983 0.176470588 0.5 0.705882353 10 1 0 16 3R:13025625-13025659 7 8.5 2194 FBgn0020496 3905.446667 142.2566667 217.6 0.002176448 0.059751154 0.0390625 -2 -2 -2 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 13031554 13031559 + 3R_13031554_13031559_+ 0.594975721 0.883468044 0.739221882 0.203994862 l(3)87Df FBtr0082703 13031448 13031598 3R + 13031532 13031588 3'utr l(3)87Df FlyBase G42502.1 GTGTTGTAAACTACCTTTTGTTACCAAACTTTATAGTAGCCAATATATTATATATAT 6 13031549 0.992026771 4 6 57 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 3R:13031532-13031588 6 l(3)87Df FBtr0082703 13031448 13031598 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 13031517 13031593 3'utr l(3)87Df FlyBase G32095.1 ATTGTTAAATCCCTTGTGTTGTAAACTACCTTTTGTTACCAAACTTTATAGTAGCCAATATATTATATATATGTTGT 13 13031549 0.98811462 9 13 120 1 1.431363764 0 0.692307692 0.851851852 13 0 0 27 3R:13031517-13031593 6 3 2195 FBgn0002354 69.66666667 16.79 25.5 0.043062201 0.178677784 0.117647059 5 5 5 0.2 dme-miR-184-5p 6mer3-8 TGATAA 3R 13262162 13262167 + 3R_13262162_13262167_+ 0.999999672 0.98801898 0.994009326 0.008471634 CG11686 FBtr0082735|FBtr0335222 13262120|13262120 13262227|13262227 3R + 13262143 13262190 3'utr CG11686 FlyBase G42527.1 AATTAACTAAGTGCCTTACTGATAACTCTTGTTTTCAATCATTTTTTA 17 13262159 0.658410539 7 17 153 1 1.322219295 0.047619048 0.176470588 0.333333333 17 0 0 21 3R:13262143-13262190 6 CG11686 FBtr0335222|FBtr0082735 13262120|13262120 13262227|13262227 TGATAA 6mer3-8 dme-miR-184-5p 3R + 13262143 13262182 3'utr CG11686 FlyBase G32118.1 AATTAACTAAGTGCCTTACTGATAACTCTTGTTTTCAATC 20 13262159 0.718139279 5 18 169 0.928571429 1.414973348 0.321428571 0.35 0.535714286 20 2 0 26 3R:13262143-13262182 6 18.5 2196 FBgn0040551 12.66666667 4.276666667 6.6 1.460526316 4.325798909 2.803030303 3 3 3 0.2 dme-miR-184-3p 7mer-A1 CCGTCCA 3R 13269681 13269687 + 3R_13269681_13269687_+ 0.794753181 0.787033753 0.790893467 0.00545844 Su(var)3-7 FBtr0082736 13268891 13270038 3R + 13269653 13269708 3'utr Su(var)3-7 FlyBase G42548.1 GTCCAGAAAGCTGCATAGCTCTTCAATCCCGTCCAGTGTCCGACCGAGTTCTTCGC 168 13269679 0.853542176 4 159 1157 0.950819672 1.638489257 0.371584699 0.089285714 0.163934426 168 6 3 174 3R:13269653-13269708 7 Su(var)3-7 FBtr0082736 13268891 13270038 CCGTCCA 7mer-A1 dme-miR-184-3p 3R + 13269652 13269710 3'utr Su(var)3-7 FlyBase G32132.1 CGTCCAGAAAGCTGCATAGCTCTTCAATCCCGTCCAGTGTCCGACCGAGTTCTTCGCTA 67 13269679 0.80390213 5 60 464 0.918604651 1.596597096 0.313953488 0.268656716 0.430232558 67 6 1 79 3R:13269652-13269710 7 115 2197 FBgn0003598 516.8066667 14.16 21.58 0.222520349 8.121468927 5.329008341 2 2 2 0.2 dme-miR-970-3p 7mer-A1 CTTATGA 3R 13312756 13312762 + 3R_13312756_13312762_+ 0.810374262 0.758697863 0.784536062 0.036540733 CG32473 FBtr0082742|FBtr0082743|FBtr0082744 13312627|13312627|13312627 13312785|13312785|13312785 3R + 13312738 13312767 3'utr CG32473 FlyBase G42559.1 AACGAAGAATTGTGATTGCTTATGATATTT 6 13312754 0.783158235 3 6 45 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3R:13312738-13312767 7 CG32473 FBtr0082744|FBtr0082743|FBtr0082742 13312627|13312627|13312627 13312785|13312785|13312785 CTTATGA 7mer-A1 dme-miR-970-3p 3R + 13312738 13312759 3'utr CG32473 FlyBase G32140.1 AACGAAGAATTGTGATTGCTTA 7 13312754 0.789544453 2 7 42 1 1.176091259 0 0.714285714 0.866666667 7 0 0 15 3R:13312738-13312759 4 6.5 2198 FBgn0052473 306.7266667 12.40666667 19.06 0.021191506 0.523911875 0.341028332 2 2 2 0.2 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 13368808 13368815 + 3R_13368808_13368815_+ 0.576201881 0.578943355 0.577572618 0.001938533 Dic1 FBtr0346113 13368692 13369278 3R + 13368687 13368893 stop_codon Dic1 FlyBase G42565.1 GAATTAGCCGCGATGCCAATCGATACCTTAACTAGGCAATAATTCTCCTTGGCTGGCTGGCAGATTCCCTTGAGCAATGCAACATTCCAGCAGCAATTCGTTCACCGTGTAGAACATAACTTAGCTTTAGCCCGTTCCAGTTGTTAACCAAGATGCTTTTATGCTAGCAAAATATTTGTTGTTAAGCGTTCAATGCCCGCTATCCCG 214 13368807 0.938636262 25 212 1540 0.992125984 1.924279286 0.255905512 0.135514019 0.271653543 214 0 2 252 3R:13368687-13368893 8 Dic1 FBtr0082748|FBtr0082747|FBtr0346113 13368692|13368692|13368692 13369091|13369091|13369278 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R + 13368780 13368832 3'utr Dic1 FlyBase G32146.1 CAATTCGTTCACCGTGTAGAACATAACTTAGCTTTAGCCCGTTCCAGTTGTTA 112 13368807 0.797299998 6 108 746 0.98816568 2.222716471 0.26035503 0.392857143 0.597633136 112 2 0 167 3R:13368780-13368832 8 127 2199 FBgn0027610 272.8866667 21.36 32.8 0.465394669 5.945692884 3.87195122 1 1 1 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 13429312 13429319 - 3R_13429312_13429319_- 0.457450994 0.481748679 0.469599836 0.017181068 yrt FBtr0114375|FBtr0114374|FBtr0114376|FBtr0082793 13428865|13428865|13428865|13428865 13429604|13429604|13430186|13429604 3R - 13429309 13429369 3'utr yrt FlyBase G50773.2 TATATCATATACACCGATGCGATATCGAGGAACGAAATGTGCTAAACCGTGTACTTAATAA 44 13429320 0.827045185 6 39 221 0.892857143 1.096910013 0.553571429 0.227272727 0.392857143 44 3 3 50 3R:13429309-13429369 8 yrt FBtr0114376|FBtr0082793|FBtr0114375|FBtr0114374 13428865|13428865|13428865|13428865 13430186|13429604|13429604|13429604 GTACTTAA 8mer-A1 dme-miR-252-5p 3R - 13429309 13429359 3'utr yrt FlyBase G38379.1 ACACCGATGCGATATCGAGGAACGAAATGTGCTAAACCGTGTACTTAATAA 28 13429320 0.803492703 5 26 135 0.977272727 1.633468456 0.727272727 0.464285714 0.659090909 28 1 0 43 3R:13429309-13429359 8 24.5 2200 FBgn0004049 300.3333333 8.753333333 13.46333333 0.081576027 2.79893374 1.819757366 1 1 1 0.2 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 13429721 13429728 - 3R_13429721_13429728_- 0.630315315 0.630227956 0.630271635 6.17E-05 yrt FBtr0114376 13428865 13430186 3R - 13429603 13429761 stop_codon yrt FlyBase G50776.1 GAGCAATTATCCGGACAGCAGTCGCATTCCGTTTCCGTCCAGCAGCAACAGCAAAGACATGGTATCGCCCTGGCTGGTTTCCTCGGAGGTGGTATCGGCACCCAAGGGACGCGAGTCGGCCATCATTCGAAAATCCGTTATTACAACCCAGTTGTAATT 421 13429729 0.970743294 14 415 2392 0.985263158 1.971275849 0.170526316 0.116389549 0.216842105 421 3 4 468 3R:13429603-13429761 8 yrt FBtr0114376 13428865 13430186 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R - 13429659 13429767 3'utr yrt FlyBase G38382.1 AACTCCGAGCAATTATCCGGACAGCAGTCGCATTCCGTTTCCGTCCAGCAGCAACAGCAAAGACATGGTATCGCCCTGGCTGGTTTCCTCGGAGGTGGTATCGGCACCC 252 13429729 0.987630833 10 251 1384 0.997409326 2.284430734 0.170984456 0.396825397 0.606217617 252 0 1 385 3R:13429659-13429767 8 326 2201 FBgn0004049 300.3333333 8.753333333 13.46333333 1.085460599 37.24295506 24.21391434 1 1 1 0.2 dme-miR-965-3p 6mer3-8 TACGCT 3R 13635299 13635304 - 3R_13635299_13635304_- 0.876779638 0.506641757 0.691710697 0.261726948 sqd FBtr0309094|FBtr0082856 13634860|13635190 13636454|13636454 3R - 13635262 13635320 3'utr sqd FlyBase G50790.1 TTCCGGATATGTGTATTACGCTCATAGACTACATATATACATACATAATACATAATACA 40 13635305 0.669475145 5 38 313 0.954545455 1.62324929 0.136363636 0.1 0.181818182 40 2 0 42 3R:13635262-13635320 6 sqd FBtr0309094|FBtr0082856 13634860|13635190 13636454|13636454 TACGCT 6mer3-8 dme-miR-965-3p 3R - 13635257 13635317 3'utr sqd FlyBase G38391.1 CGGATATGTGTATTACGCTCATAGACTACATATATACATACATAATACATAATACATCTAT 14 13635296 0.980421074 5 13 98 0.952380952 1.301029996 0.142857143 0.357142857 0.571428571 14 1 0 20 3R:13635257-13635317 6 25 2202 FBgn0263396 13095.56667 400.09 616.6433333 0.001909043 0.062485941 0.040542075 1 -8 -3.5 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 3R 13639898 13639903 - 3R_13639898_13639903_- 0.714296469 0.686431836 0.700364152 0.019703318 sqd FBtr0082854 13637716 13642188 3R - 13639792 13639926 3'utr sqd FlyBase G50804.1 TGTTGTCAATGTGCGTCGACAATTTGACTGTATACCAATTATATATACATTTGTACATTTACATACACCTTTAATCATAAACTTTGAGTAAATTGTTTTACAAAGAAATTGCATGTTTCTCAATGTTTTTAGCAA 22 13639896 0.984377038 13 22 174 1 1.462397998 0.275862069 0.227272727 0.413793103 22 0 0 29 3R:13639792-13639926 6 sqd FBtr0082854 13637716 13642188 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 13639881 13639923 3'utr sqd FlyBase G38403.1 TGTCAATGTGCGTCGACAATTTGACTGTATACCAATTATATAT 20 13639902 0.962089656 5 17 137 0.928571429 1.414973348 0.428571429 0.4 0.571428571 20 2 0 26 3R:13639881-13639923 6 15.5 2203 FBgn0263396 13095.56667 400.09 616.6433333 0.001183607 0.038741283 0.025136086 -7 -1 -4 0.2 dme-miR-277-3p 7mer-m8 TGCATTT 3R 13640404 13640410 - 3R_13640404_13640410_- 0.619935122 0.620204256 0.620069689 0.000190353 sqd FBtr0082854 13637716 13642188 3R - 13640378 13640472 3'utr sqd FlyBase G50806.1 ACCACTGCTGCAGCACCCCCCCGCAGCCTCATTCGTTAGATCGTTCTTTTATTTGCTTTATTTGCATTTCCGCTGCACTTTCTTGACCAAAACGT 26 13640411 0.930024362 10 25 268 0.939393939 1.491361694 0.303030303 0.230769231 0.393939394 26 2 0 31 3R:13640378-13640472 7 sqd FBtr0082854 13637716 13642188 TGCATTT 7mer-m8 dme-miR-277-3p 3R - 13640393 13640430 3'utr sqd FlyBase G38407.1 GTTCTTTTATTTGCTTTATTTGCATTTCCGCTGCACTT 7 13640412 0.646496213 5 7 88 1 1 0.6 0.428571429 0.6 7 0 0 10 3R:13640393-13640430 7 12.5 2204 FBgn0263396 13095.56667 400.09 616.6433333 0.000954522 0.03124297 0.020271037 1 2 1.5 0.2 dme-miR-33-5p 7mer-m8 CAATGCA 3R 13640735 13640741 - 3R_13640735_13640741_- 0.672864854 0.670905613 0.671885234 0.001385434 sqd FBtr0082854 13637716 13642188 3R - 13640728 13640779 3'utr sqd FlyBase G50809.1 TTATTATTCCGGCAACGGGATAATATTCACGTTCTTTGCAATGCATATGTTT 7 13640734 0.892321635 5 6 64 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 3R:13640728-13640779 7 sqd FBtr0082854 13637716 13642188 CAATGCA 7mer-m8 dme-miR-33-5p 3R - 13640720 13640752 3'utr sqd FlyBase G38410.1 CACGTTCTTTGCAATGCATATGTTTTCGTATGC 8 13640745 0.686614291 6 7 63 0.833333333 1 0 0.5 0.666666667 8 2 0 10 3R:13640720-13640752 7 6 2205 FBgn0263396 13095.56667 400.09 616.6433333 0.00045817 0.014996626 0.009730098 -7 4 -1.5 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 13641265 13641271 - 3R_13641265_13641271_- 0.820754445 0.82041754 0.820585993 0.000238224 sqd FBtr0082854 13637716 13642188 3R - 13641254 13641294 3'utr sqd FlyBase G50812.1 CTTGGTTGCCTTCAACAGACTTTCCAAAGATGACAAATACC 14 13641273 0.673489021 4 14 59 1 1.278753601 0.052631579 0.214285714 0.421052632 14 0 0 19 3R:13641254-13641294 7 sqd FBtr0082854 13637716 13642188 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 13641247 13641285 3'utr sqd FlyBase G38414.1 CTTCAACAGACTTTCCAAAGATGACAAATACCTCAAACG 8 13641273 0.912057784 3 8 26 1 1.204119983 0.1875 0.375 0.6875 8 0 0 16 3R:13641247-13641285 7 10.5 2206 FBgn0263396 13095.56667 400.09 616.6433333 0.000801798 0.026244095 0.017027671 2 2 2 0.2 dme-miR-7-5p 7mer-A1 TCTTCCA 3R 13651681 13651687 + 3R_13651681_13651687_+ 0.649470742 0.529825466 0.589648104 0.084601932 rin FBtr0346347|FBtr0082797|FBtr0082799|FBtr0346346 13651565|13651565|13651565|13651565 13654527|13652413|13652413|13652413 3R + 13651596 13651734 3'utr rin FlyBase G42600.1 AAAGCATCAACAAATGAGCAACGGCAGCAGTAGCGACTATAACATCAAGAACAGCAGCAACAACCCAACGTTAAAAACATCGACTTCTTCCACAATGCAATCAATCAATTACATTCAAGAACATCTCATGCAATTAAAC 68 13651683 0.952372698 13 64 291 0.951219512 1.591064607 0.036585366 0.191176471 0.329268293 68 3 1 78 3R:13651596-13651734 7 rin FBtr0082799|FBtr0346346|FBtr0346347|FBtr0082797 13651565|13651565|13651565|13651565 13652413|13652413|13654527|13652413 TCTTCCA 7mer-A1 dme-miR-7-5p 3R + 13651642 13651772 3'utr rin FlyBase G32182.2 AAGAACAGCAGCAACAACCCAACGTTAAAAACATCGACTTCTTCCACAATGCAATCAATCAATTACATTCAAGAACATCTCATGCAATTAAACACACGCAAATCACACACTCATACACTAAGATAAAGTAG 40 13651683 0.956057617 15 37 191 0.933333333 1.748188027 0.066666667 0.325 0.55 40 4 0 56 3R:13651642-13651772 7 24 2207 FBgn0015778 4641.9 120.1133333 185.17 0.005170297 0.199811289 0.129610628 -2 -2 -2 0.2 dme-miR-276a-3p 6mer2-7 GTTCCT 3R 13651808 13651813 + 3R_13651808_13651813_+ 0.998669958 0.986880666 0.992775312 0.008336294 rin FBtr0346347|FBtr0082797|FBtr0082799|FBtr0346346 13651565|13651565|13651565|13651565 13654527|13652413|13652413|13652413 3R + 13651785 13651825 3'utr rin FlyBase G42601.1 AAAACGTCAACTGTCCTTTAAATGTTCCTGAGCGCAACTCT 17 13651806 0.685274808 4 14 127 0.80952381 1.230448921 0.19047619 0.235294118 0.380952381 17 4 0 17 3R:13651785-13651825 6 rin FBtr0082799|FBtr0346346|FBtr0346347|FBtr0082797 13651565|13651565|13651565|13651565 13652413|13652413|13654527|13652413 GTTCCT 6mer2-7 dme-miR-276a-3p 3R + 13651785 13651825 3'utr rin FlyBase G32183.1 AAAACGTCAACTGTCCTTTAAATGTTCCTGAGCGCAACTCT 21 13651806 0.728463717 4 18 142 0.806451613 0.795880017 0.193548387 0.380952381 0.580645161 21 3 3 25 3R:13651785-13651825 6 14.5 2208 FBgn0015778 4641.9 120.1133333 185.17 0.003123721 0.120719321 0.078306421 2 2 2 0.2 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3R 13652792 13652797 + 3R_13652792_13652797_+ 0.840427462 0.622487381 0.731457421 0.154106923 rin FBtr0346347 13651565 13654527 3R + 13652756 13652832 3'utr rin FlyBase G42608.1 AAACCTTTTGCTACTTAAATCTAATTTGCAGACTAGCTAGTCTATATAGGTATCGTATCGGTTCGAAACGGTTCGGT 10 13652799 0.985772016 6 9 77 1 1.041392685 0.181818182 0.1 0.181818182 10 0 0 11 3R:13652756-13652832 6 rin FBtr0346347 13651565 13654527 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3R + 13652736 13652819 3'utr rin FlyBase G32190.1 CGCCGCATTTTAGAGCCTGTAAACCTTTTGCTACTTAAATCTAATTTGCAGACTAGCTAGTCTATATAGGTATCGTATCGGTTC 8 13652764 0.982417017 7 7 60 1 0.954242509 0.111111111 0.125 0.222222222 8 0 0 9 3R:13652736-13652819 6 4.5 2209 FBgn0015778 4641.9 120.1133333 185.17 0.000969431 0.037464617 0.024301993 -7 28 10.5 0.2 dme-miR-304-5p 6mer2-7 GAGATT 3R 13663476 13663481 + 3R_13663476_13663481_+ 0.769370771 0.803022031 0.786196401 0.023794992 B52 FBtr0300588|FBtr0082804 13663107|13663107 13666891|13666891 3R + 13663458 13663505 stop_codon B52 FlyBase G42618.1 TTGATGTGCTTTGACTGAGAGATTCCCTCCTCGGCTTGGGGCCGAATC 16 13663480 0.813463016 3 14 103 0.913043478 1.322219295 0 0.375 0.565217391 16 2 0 21 3R:13663458-13663505 6 B52 FBtr0082804|FBtr0300588 13663107|13663107 13666891|13666891 GAGATT 6mer2-7 dme-miR-304-5p 3R + 13663453 13663505 stop_codon B52 FlyBase G32198.1 AGAGTTTGATGTGCTTTGACTGAGAGATTCCCTCCTCGGCTTGGGGCCGAATC 11 13663480 0.97292806 3 11 70 1 1.230448921 0.352941176 0.363636364 0.588235294 11 0 0 17 3R:13663453-13663505 6 13 2210 FBgn0004587 2711.693333 191.7166667 292.1666667 0.004794052 0.067808398 0.044495151 -4 -4 -4 0.2 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 13663539 13663545 + 3R_13663539_13663545_+ 0.636316174 0.509279345 0.572797759 0.089828653 B52 FBtr0300588|FBtr0082804|FBtr0300586|FBtr0082803 13663107|13663107|13663474|13663474 13666891|13666891|13666891|13666891 3R + 13663518 13663557 5'utr B52 FlyBase G42619.1 AGAATCAAATCTAATTGAATCGCTGTGAGAAAGACAAGCT 7 13663535 0.964573348 3 6 31 0.857142857 0.77815125 0 0 0 7 1 0 6 3R:13663518-13663557 7 B52 FBtr0082803|FBtr0300586|FBtr0082804|FBtr0300588 13663474|13663474|13663107|13663107 13666891|13666891|13666891|13666891 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R + 13663513 13663584 5'utr B52 FlyBase G32199.1 GAAAGAGAATCAAATCTAATTGAATCGCTGTGAGAAAGACAAGCTAGTCTAGTGACCGACCGACCGGTTCAG 8 13663534 0.945741218 4 7 35 0.923076923 0.77815125 0.307692308 0.25 0.538461538 8 0 1 12 3R:13663513-13663584 7 5.5 2211 FBgn0004587 2711.693333 191.7166667 292.1666667 0.002028253 0.028688168 0.018824872 4 5 4.5 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3R 13675253 13675259 - 3R_13675253_13675259_- 0.520256121 0.519446471 0.519851296 0.000572474 CG9588 FBtr0082849 13675090 13675502 3R - 13675114 13675292 3'utr CG9588 FlyBase G50842.1 AAGGTGCACAGGTGACAGGCAAAAGGATGATATTGTGATTCGGTGGATTCTGTCGACATGACCGATTTTTTTTGCATTTAATTTTCATTCAATATGAAATGATGCGTAACAAAATGATGAGGCGGTTTTACTAACAAATAAGTTTTTATAGCGCTTTTACTGGTAAATAAAGAAGGATA 169 13675260 0.902794834 20 160 1327 0.940594059 1.433655561 0.361386139 0.159763314 0.297029703 169 6 6 190 3R:13675114-13675292 7 CG9588 FBtr0082849 13675090 13675502 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 13675208 13675276 3'utr CG9588 FlyBase G38439.1 AGGCAAAAGGATGATATTGTGATTCGGTGGATTCTGTCGACATGACCGATTTTTTTTGCATTTAATTTT 115 13675260 0.692813686 10 108 891 0.941176471 1.505149978 0.294117647 0.365217391 0.570588235 115 6 4 160 3R:13675208-13675276 7 111 2212 FBgn0038166 196.9933333 19.93666667 30.61666667 0.563470845 5.567630831 3.62547632 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 13692361 13692366 + 3R_13692361_13692366_+ 0.592991913 0.780068247 0.68653008 0.13228292 flfl FBtr0114604|FBtr0114604|FBtr0114604 13691732|13691732|13691732 13693905|13693905|13693905 3R + 13692346 13692424 3'utr flfl FlyBase G42665.1 ATGAGTTAACAGATCCTGTGAAGTTGGCTGCTGGCCCAGAATGTTTGTGCAATACTTTCGTGTCGATATTTAAATAACA 11 13692370 0.983799174 5 10 89 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 3R:13692346-13692424 6 flfl FBtr0114604|FBtr0114604|FBtr0114604 13691732|13691732|13691732 13693905|13693905|13693905 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 13692328 13692405 3'utr flfl FlyBase G32232.1 TCTATCGTATGAGATCGTATGAGTTAACAGATCCTGTGAAGTTGGCTGCTGGCCCAGAATGTTTGTGCAATACTTTCG 9 13692390 0.981659948 7 9 66 1 1.113943352 0.384615385 0.333333333 0.538461538 9 0 0 13 3R:13692328-13692405 6 6 2213 FBgn0024555 2089.806667 50.89333333 77.96333333 0.002871079 0.117893634 0.076959254 -9 -29 -19 0.2 dme-miR-34-5p 6mer2-7 ACTGCC 3R 13692856 13692861 + 3R_13692856_13692861_+ 0.721883933 0.618309627 0.67009678 0.07323809 flfl FBtr0114604 13691732 13693905 3R + 13692778 13692882 3'utr flfl FlyBase G42667.1 GAGTTAAATGCAGATAACACTTGAACCCAATGAACCTTGTATATAATTTAGTCACTCTCAATGCGCGATTAGTTGATAACTGCCCTTGCACCACTGACGCCGACA 17 13692864 0.975233214 11 15 94 0.925925926 1.397940009 0.111111111 0.411764706 0.62962963 17 2 0 25 3R:13692778-13692882 6 flfl FBtr0114604 13691732 13693905 ACTGCC 6mer2-7 dme-miR-34-5p 3R + 13692783 13692877 3'utr flfl FlyBase G32233.1 AAATGCAGATAACACTTGAACCCAATGAACCTTGTATATAATTTAGTCACTCTCAATGCGCGATTAGTTGATAACTGCCCTTGCACCACTGACGC 16 13692856 0.974059463 9 14 95 0.916666667 1.342422681 0.041666667 0.375 0.583333333 16 2 0 22 3R:13692783-13692877 6 5.5 2214 FBgn0024555 2089.806667 50.89333333 77.96333333 0.002631822 0.108069164 0.070545983 -8 0 -4 0.2 dme-miR-283-5p 6mer3-8 TGATAT 3R 13693724 13693729 + 3R_13693724_13693729_+ 0.982869818 0.999991677 0.991430747 0.012107012 flfl FBtr0114604 13691732 13693905 3R + 13693671 13693771 3'utr flfl FlyBase G42672.1 AGCGACAACACTATAGTTTATACATAGTATTTATATGAATCGTGTATTGTATATGATATGCTGTCTAATCCCTAATCCTAACACATACCCATTACGTCTAT 15 13693729 0.987087292 8 15 133 1 1.204119983 0.0625 0.066666667 0.125 15 0 0 16 3R:13693671-13693771 6 flfl FBtr0114604 13691732 13693905 TGATAT 6mer3-8 dme-miR-283-5p 3R + 13693706 13693773 3'utr flfl FlyBase G32239.1 TGAATCGTGTATTGTATATGATATGCTGTCTAATCCCTAATCCTAACACATACCCATTACGTCTATAA 16 13693728 0.84123054 8 13 133 0.92 1.361727836 0.08 0.4375 0.64 16 2 0 23 3R:13693706-13693773 6 11 2215 FBgn0024555 2089.806667 50.89333333 77.96333333 0.005263645 0.216138329 0.141091966 -5 -4 -4.5 0.2 dme-miR-184-3p 7mer-m8 TCCGTCC 3R 13838462 13838468 - 3R_13838462_13838468_- 0.589464871 0.507489248 0.548477059 0.057965573 CG31495 FBtr0082882|FBtr0344765 13838238|13838433 13838773|13838773 3R - 13838435 13838479 3'utr CG31495 FlyBase G50877.1 ACGGAGAGCATTCCGTCCTCCAGGAGTTCGGTGACCGGTGGGCCC 16 13838469 0.957978414 3 15 79 0.947368421 1.255272505 0.157894737 0.1875 0.315789474 16 1 0 18 3R:13838435-13838479 7 CG31495 FBtr0344765|FBtr0082882 13838433|13838238 13838773|13838773 TCCGTCC 7mer-m8 dme-miR-184-3p 3R - 13838446 13838479 3'utr CG31495 FlyBase G38461.1 ACGGAGAGCATTCCGTCCTCCAGGAGTTCGGTGA 11 13838469 0.934862986 2 11 57 1 1.176091259 0.4 0.272727273 0.466666667 11 0 0 15 3R:13838446-13838479 7 13 2216 FBgn0051495 85.87 7.076666667 10.89333333 0.151391639 1.837023081 1.193390453 1 1 1 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3R 13838559 13838565 - 3R_13838559_13838565_- 0.443114771 0.438660215 0.440887493 0.003149878 CG31495 FBtr0082882|FBtr0344765 13838238|13838433 13838773|13838773 3R - 13838545 13838582 3'utr CG31495 FlyBase G50878.1 AATGAACAGCCCGATAATGTGATTGCAAAGATACTAGA 12 13838559 0.70531292 3 11 70 0.916666667 1.041392685 0.166666667 0 0 12 1 0 11 3R:13838545-13838582 7 CG31495 FBtr0344765|FBtr0082882 13838433|13838238 13838773|13838773 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 13838545 13838581 3'utr CG31495 FlyBase G38462.1 ATGAACAGCCCGATAATGTGATTGCAAAGATACTAGA 15 13838559 0.763889428 3 14 84 0.92 1.361727836 0 0.533333333 0.72 15 2 0 23 3R:13838545-13838581 7 13.5 2217 FBgn0051495 85.87 7.076666667 10.89333333 0.157214394 1.907677814 1.239290086 -6 -6 -6 0.2 dme-miR-11-3p 7mer-m1 TGTGATG 3R 13968379 13968385 - 3R_13968379_13968385_- 0.61090133 0.61069868 0.610800005 0.00014326 rdx FBtr0334298|FBtr0301632|FBtr0301634|FBtr0100361 13967059|13967953|13967953|13967953 13969185|13969185|13969185|13969185 3R - 13968349 13968408 3'utr rdx FlyBase G50886.1 AATTACAAAGCGTACACTTTGATTGTGATGTATATTCGATGAGTATGACTAATGAGTAAC 39 13968386 0.890507163 9 36 344 0.94 1.194976603 0.24 0.256410256 0.42 39 1 2 47 3R:13968349-13968408 7 rdx FBtr0301634|FBtr0100361|FBtr0301632|FBtr0334298 13967953|13967953|13967953|13967059 13969185|13969185|13969185|13969185 TGTGATG 7mer-m1 dme-miR-11-3p 3R - 13968349 13968408 3'utr rdx FlyBase G38468.1 AATTACAAAGCGTACACTTTGATTGTGATGTATATTCGATGAGTATGACTAATGAGTAAC 27 13968386 0.987803012 10 27 264 1 1.579783597 0.157894737 0.37037037 0.552631579 27 0 0 38 3R:13968349-13968408 7 29 2218 FBgn0264493 1241.27 56.45333333 86.81 0.023363168 0.51369863 0.334062896 1 1 1 0.2 dme-miR-33-5p 7mer-A1 AATGCAA 3R 13968850 13968856 - 3R_13968850_13968856_- 0.747152139 0.717455301 0.73230372 0.020998809 rdx FBtr0334298|FBtr0301632|FBtr0301633|FBtr0301634|FBtr0100361 13967059|13967953|13968623|13967953|13967953 13969185|13969185|13969185|13969185|13969185 3R - 13968810 13968875 3'utr rdx FlyBase G50889.1 ATGTTAAACGCAGACAGATAATGCAAATGCAGGAGCAAAAGCATAGCGAGCCGTACCGTTTATTGT 46 13968857 0.838817188 7 45 117 0.980769231 1.707570176 0.192307692 0.108695652 0.211538462 46 1 0 51 3R:13968810-13968875 7 rdx FBtr0301634|FBtr0100361|FBtr0301632|FBtr0301633|FBtr0334298 13967953|13967953|13967953|13968623|13967059 13969185|13969185|13969185|13969185|13969185 AATGCAA 7mer-A1 dme-miR-33-5p 3R - 13968812 13968870 3'utr rdx FlyBase G38470.1 AAACGCAGACAGATAATGCAAATGCAGGAGCAAAAGCATAGCGAGCCGTACCGTTTATT 16 13968857 0.849053774 4 16 38 1 1.342422681 0.227272727 0.3125 0.5 16 0 0 22 3R:13968812-13968870 7 27.5 2219 FBgn0264493 1241.27 56.45333333 86.81 0.022154729 0.487128011 0.316783781 1 1 1 0.2 dme-miR-307a-3p 7mer-m8 GGTTGTG 3R 14034560 14034566 + 3R_14034560_14034566_+ 0.697820962 0.688818078 0.69331952 0.006366012 CG3061 FBtr0082869 14034491 14035041 3R + 14034496 14034615 3'utr CG3061 FlyBase G42701.1 AGTTAATGCTATCACACGAAAAGCTACTCCTCAAATCCACCACTATTTGAAACCTTAACTGCTGGGTTGTGTAGTTATTGCATATTTTGCTTTAGTTGTTATAAATGAATTTCATTGTCT 21 14034573 0.991038884 15 18 177 0.913043478 1.021189299 0.217391304 0.095238095 0.173913043 21 1 1 21 3R:14034496-14034615 7 CG3061 FBtr0082869 14034491 14035041 GGTTGTG 7mer-m8 dme-miR-307a-3p 3R + 14034545 14034579 3'utr CG3061 FlyBase G32265.2 AAACCTTAACTGCTGGGTTGTGTAGTTATTGCATA 5 14034564 0.530392835 3 3 41 0.8 0.903089987 0.3 0.8 0.9 5 2 0 8 3R:14034545-14034579 7 5 2220 FBgn0038195 1209.576667 74.17333333 113.5466667 0.004133678 0.067409671 0.044034758 -13 -4 -8.5 0.2 dme-miR-965-3p 6mer3-8 TACGCT 3R 14119310 14119315 - 3R_14119310_14119315_- 0.743805705 0.955662009 0.849733857 0.149805026 Abi FBtr0112896|FBtr0337096|FBtr0082910|FBtr0337097|FBtr0307077|FBtr0307076 14119260|14119260|14119260|14119260|14119260|14119260 14120064|14120064|14120064|14120064|14120064|14120064 3R - 14119295 14119329 3'utr Abi FlyBase G50912.1 AATACAAGTACACATACGCTCTATATGGTAAAAAT 24 14119315 0.90643634 3 23 137 0.888888889 1.380211242 0 0.083333333 0.185185185 24 3 0 24 3R:14119295-14119329 6 Abi FBtr0307077|FBtr0307076|FBtr0082910|FBtr0337097|FBtr0112896|FBtr0337096 14119260|14119260|14119260|14119260|14119260|14119260 14120064|14120064|14120064|14120064|14120064|14120064 TACGCT 6mer3-8 dme-miR-965-3p 3R - 14119294 14119350 3'utr Abi FlyBase G38486.1 AGGAATCAAATTAAATTAAACAATACAAGTACACATACGCTCTATATGGTAAAAATA 16 14119315 0.95948439 5 14 73 0.928571429 1.414973348 0.071428571 0.4375 0.678571429 16 2 0 26 3R:14119294-14119350 6 19 2221 FBgn0020510 1356.63 69.31 106.3 0.014005293 0.274130717 0.178739417 0 0 0 0.2 dme-miR-283-5p 6mer3-8 TGATAT 3R 14119533 14119538 - 3R_14119533_14119538_- 0.97794279 0.999278983 0.988610886 0.015086972 Abi FBtr0112896|FBtr0337096|FBtr0082910|FBtr0337097|FBtr0307077|FBtr0307076 14119260|14119260|14119260|14119260|14119260|14119260 14120064|14120064|14120064|14120064|14120064|14120064 3R - 14119486 14119587 3'utr Abi FlyBase G50913.2 AAATATTTGCTCACAGTTTTATCAAGCGATTTCTGTTTGCCTTGCGCTTTGATATGCCCGGCTATTATACACCAATACTACCCGAACCTATGCCCCCAGCAA 33 14119533 0.939595014 10 30 221 0.897435897 1.06694679 0.230769231 0.181818182 0.307692308 33 2 2 35 3R:14119486-14119587 6 Abi FBtr0307077|FBtr0307076|FBtr0082910|FBtr0337097|FBtr0112896|FBtr0337096 14119260|14119260|14119260|14119260|14119260|14119260 14120064|14120064|14120064|14120064|14120064|14120064 TGATAT 6mer3-8 dme-miR-283-5p 3R - 14119458 14119556 3'utr Abi FlyBase G38487.1 TCTGTTTGCCTTGCGCTTTGATATGCCCGGCTATTATACACCAATACTACCCGAACCTATGCCCCCAGCAATACTGTAGGTTATATAAATTTCAGTTAG 11 14119533 0.988293534 7 10 89 0.933333333 1.146128036 0.2 0.363636364 0.533333333 11 1 0 14 3R:14119458-14119556 6 14 2222 FBgn0020510 1356.63 69.31 106.3 0.010319689 0.201991055 0.131702728 -5 -5 -5 0.2 dme-miR-2b-2-5p 7mer-m8 TTGAAGA 3R 14235033 14235039 - 3R_14235033_14235039_- 0.475094924 0.548919512 0.512007218 0.052201875 CG43291 FBtr0347150 14234982 14236679 3R - 14234881 14235071 3'utr CG43291 FlyBase G50928.1 AGGGGAGCCATAGCTGAAGCTGCACCCAGACTTTGAAGATACACTTGTAGAACGAGTGGTTACACCACCAAGATGGAGTATTTAAGTTAAAAACTTTAAGGATGTCACAACATGTATAGATTTAAGTGTATGTTTGCAAGGAAAAATGCCATAATATGTAAGGGAAAAAGTTATAGTTCCTTTAAAATTCT 32 14235038 0.97276967 14 31 185 0.96969697 1.204119983 0.272727273 0.03125 0.060606061 32 0 1 32 3R:14234881-14235071 7 CG43291 FBtr0347150 14234982 14236679 TTGAAGA 7mer-m8 dme-miR-2b-2-5p 3R - 14234965 14235060 3'utr CG43291 FlyBase G38496.1 AGCTGAAGCTGCACCCAGACTTTGAAGATACACTTGTAGAACGAGTGGTTACACCACCAAGATGGAGTATTTAAGTTAAAAACTTTAAGGATGTCA 18 14235038 0.93381821 5 18 72 1 1.462397998 0.206896552 0.444444444 0.655172414 18 0 0 29 3R:14234965-14235060 7 15 2223 FBgn0262983 11.66666667 1.006666667 1.546666667 1.285714286 14.90066225 9.698275862 -1 -1 -1 0.2 dme-miR-11-3p 7mer-m1 TGTGATG 3R 14235886 14235892 - 3R_14235886_14235892_- 0.463958912 0.471646202 0.467802557 0.005435742 CG43291 FBtr0347150 14234982 14236679 3R - 14235814 14235981 3'utr CG43291 FlyBase G50931.1 AGAAAGCACTCAAGGACCTGTGGGGCGGAATGAATGCAGCACTCAAAAGGAGGAGGACTCGGGTTACGTCGATTCAAGTAACCGAAGATTGTGATGGTGTCATGAATTTATGGTGCAGGGATATTAAAATGTCCCTCATCCTGAAAACTGGTTTACATTTGACCTATA 179 14235893 0.961521296 16 169 1039 0.948598131 1.353253528 0.186915888 0.173184358 0.308411215 179 3 8 203 3R:14235814-14235981 7 CG43291 FBtr0347150 14234982 14236679 TGTGATG 7mer-m1 dme-miR-11-3p 3R - 14235821 14236111 3'utr CG43291 FlyBase G38498.1 GAATCAACGATACTTGCAATTTCCGTGTCGAATCTTTATGCGAATGCATCTCGGAATGCTGGAGATGAATCTGGACCTGGTAACGGAGCCGAAGGAGGATGACAGCGACAGCGGATGCGGGAGCTTACCCAGAAAGCACTCAAGGACCTGTGGGGCGGAATGAATGCAGCACTCAAAAGGAGGAGGACTCGGGTTACGTCGATTCAAGTAACCGAAGATTGTGATGGTGTCATGAATTTATGGTGCAGGGATATTAAAATGTCCCTCATCCTGAAAACTGGTTTACATTTG 153 14235893 0.969897876 19 150 851 0.983122363 1.668385917 0.168776371 0.418300654 0.624472574 153 0 4 233 3R:14235821-14236111 7 141.5 2224 FBgn0262983 11.66666667 1.006666667 1.546666667 12.12857143 140.5629139 91.48706897 1 1 1 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 14256901 14256907 + 3R_14256901_14256907_+ 0.622033945 0.623077982 0.622555963 0.00073829 CG43179 FBtr0306052 14256732 14256930 3R + 14256885 14256942 3'utr CG43179 FlyBase G42746.1 ATTCAGGCGTTCTTATGGCAGCTTTAAAAAAGCCATAATGACGGTTAAGGTCTCTGCA 14 14256900 0.981767122 4 14 100 1 1.204119983 0 0.142857143 0.25 14 0 0 16 3R:14256885-14256942 7 CG43179 FBtr0306052 14256732 14256930 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 14256886 14256913 3'utr CG43179 FlyBase G32298.1 TTCAGGCGTTCTTATGGCAGCTTTAAAA 6 14256900 0.726681212 3 5 43 0.833333333 0.698970004 0 0 0 6 1 0 5 3R:14256886-14256913 7 9 2225 FBgn0262808 15 2.723333333 4.116666667 0.6 3.304773562 2.186234818 1 1 1 0.2 dme-miR-980-3p 6mer3-8 GGCAGC 3R 14263455 14263460 - 3R_14263455_14263460_- 0.996695173 0.999494331 0.998094752 0.001979263 trx FBtr0082950|FBtr0082948|FBtr0082947|FBtr0082949 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 3R - 14263435 14263514 3'utr trx FlyBase G50948.2 TCCTATCGGGGCGATCGGTCAGACTTGTACAGGCAAAGTTCCATAGCATTTTTTGGCAGCCATTCAAGACGCGCGCACTT 62 14263461 0.781601175 9 51 404 0.826086957 1.278753601 0.086956522 0.096774194 0.188405797 62 10 2 57 3R:14263435-14263514 6 trx FBtr0082947|FBtr0082949|FBtr0082950|FBtr0082948 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 14263436 14263520 3'utr trx FlyBase G38508.1 GTATATTCCTATCGGGGCGATCGGTCAGACTTGTACAGGCAAAGTTCCATAGCATTTTTTGGCAGCCATTCAAGACGCGCGCACT 30 14263461 0.983629459 9 24 197 0.76744186 1.041392685 0.093023256 0.366666667 0.558139535 30 8 2 33 3R:14263436-14263520 6 36 2226 FBgn0003862 1984.743333 17.36 26.62333333 0.018138365 2.073732719 1.352197321 1 1 1 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 3R 14264069 14264074 - 3R_14264069_14264074_- 0.969088355 0.922772497 0.945930426 0.032750287 trx FBtr0082950|FBtr0082948|FBtr0082947|FBtr0082949 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 3R - 14264058 14264091 3'utr trx FlyBase G50952.1 AATTACTTACAGGGGCTTGTGTTAGATTGTACAT 6 14264073 0.686116203 5 6 50 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 3R:14264058-14264091 6 trx FBtr0082947|FBtr0082949|FBtr0082950|FBtr0082948 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 14264053 14264089 3'utr trx FlyBase G38513.1 TTACTTACAGGGGCTTGTGTTAGATTGTACATATATT 11 14264073 0.687467593 4 9 97 0.894736842 0.929418926 0 0.363636364 0.631578947 11 1 1 17 3R:14264053-14264089 6 8.5 2227 FBgn0003862 1984.743333 17.36 26.62333333 0.00428267 0.489631336 0.319268812 -1 -1 -1 0.2 dme-miR-8-3p 7mer-m8 CAGTATT 3R 14264299 14264305 - 3R_14264299_14264305_- 0.408200492 0.407579956 0.407890224 0.00043876 trx FBtr0082950|FBtr0082948|FBtr0082947|FBtr0082949 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 3R - 14264280 14264328 3'utr trx FlyBase G50955.1 AAAGAACAGAAACTCGATGACGTCAGTATTCAAGGGGAGATAATTAATA 164 14264306 0.845182834 6 156 814 0.95959596 1.977723605 0.580808081 0.164634146 0.308080808 164 7 1 190 3R:14264280-14264328 7 trx FBtr0082947|FBtr0082949|FBtr0082950|FBtr0082948 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 CAGTATT 7mer-m8 dme-miR-8-3p 3R - 14264283 14264348 3'utr trx FlyBase G38514.1 ATATCCGAGCGATCGGAGTGAAAGAACAGAAACTCGATGACGTCAGTATTCAAGGGGAGATAATTA 98 14264306 0.835554401 7 94 460 0.973856209 2.173186268 0.424836601 0.448979592 0.647058824 98 4 0 149 3R:14264283-14264348 7 129.5 2228 FBgn0003862 1984.743333 17.36 26.62333333 0.065247731 7.459677419 4.864154251 1 1 1 0.2 dme-miR-932-5p 6mer2-7 GAATTG 3R 14302262 14302267 + 3R_14302262_14302267_+ 0.917510638 0.763386699 0.840448668 0.108982055 CG12207 FBtr0309999|FBtr0309998|FBtr0082922|FBtr0344157|FBtr0082923|FBtr0309997|FBtr0082921 14301482|14301482|14301482|14301482|14301482|14301482|14301482 14302276|14302276|14302276|14302276|14302276|14302276|14302276 3R + 14302196 14302277 3'utr CG12207 FlyBase G42758.1 TATCGAACTGCACTCATATCGAGCCAAGTCATGTTGTACGTGAGAATGTTTTTTAAAATAAAGTGAGAATTGTGTTGGAACA 17 14302266 0.980212426 11 15 107 0.88 1.342422681 0.32 0.294117647 0.52 17 3 0 22 3R:14302196-14302277 6 CG12207 FBtr0344157|FBtr0082922|FBtr0309998|FBtr0309999|FBtr0082921|FBtr0309997|FBtr0082923 14301482|14301482|14301482|14301482|14301482|14301482|14301482 14302276|14302276|14302276|14302276|14302276|14302276|14302276 GAATTG 6mer2-7 dme-miR-932-5p 3R + 14302225 14302278 3'utr CG12207 FlyBase G32312.1 CATGTTGTACGTGAGAATGTTTTTTAAAATAAAGTGAGAATTGTGTTGGAACAA 13 14302266 0.977309024 6 13 89 1 1.255272505 0 0.153846154 0.388888889 13 0 0 18 3R:14302225-14302278 6 9 2229 FBgn0038220 244.6666667 14.73 22.60333333 0.036784741 0.610997963 0.398171361 -4 -4 -4 0.2 dme-miR-34-5p 7mer-A1 ACTGCCA 3R 14319837 14319843 + 3R_14319837_14319843_+ 0.776136715 0.763481145 0.76980893 0.008948861 pr-set7 FBtr0082930 14318757 14320494 3R + 14319720 14319876 3'utr pr-set7 FlyBase G42774.1 AAGAGATGATGATGTTGATGAAGCCACGCATTCACATTGACAAGAATCGATTGTACACTATTTATATAGATATTTATATTAGATACATGTGTAATTTCTAACTATTACGTACTATTTACTGCCATAGAGCTATACACTCCCCCTCGCACCTGTCCCA 125 14319835 0.982639671 11 119 899 0.929032258 2.158362492 0.135483871 0.184 0.341935484 125 11 0 144 3R:14319720-14319876 7 pr-set7 FBtr0082930 14318757 14320494 ACTGCCA 7mer-A1 dme-miR-34-5p 3R + 14319806 14319864 3'utr pr-set7 FlyBase G32324.1 ATGTGTAATTTCTAACTATTACGTACTATTTACTGCCATAGAGCTATACACTCCCCCTC 56 14319835 0.983604819 7 50 391 0.94047619 1.420505837 0.202380952 0.375 0.583333333 56 3 2 79 3R:14319806-14319864 7 80.5 2230 FBgn0011474 544.8566667 15.96333333 24.49 0.147745279 5.042806431 3.287055941 2 2 2 0.2 dme-bantam-3p 7mer-m8 TGATCTC 3R 14320604 14320610 - 3R_14320604_14320610_- 0.459738875 0.443514606 0.45162674 0.011472313 Afti FBtr0310001 14320189 14321785 3R - 14320521 14320662 3'utr Afti FlyBase G51003.1 AGAAGAACTCCCATGCATTCCAAGTGTAAATGAGTGTGACTGGTTGCCATGATGATCTCCAGGTAATCGCTGGAAAACGAAACCCAATCCGCTCCAGTTCTTGATTATTGTTTTGTTCGTGTTAATGTGTTTTCATTTATTT 172 14320610 0.986334636 13 162 1176 0.947368421 1.77815125 0.336842105 0.093023256 0.178947368 172 8 2 180 3R:14320521-14320662 7 Afti FBtr0310001 14320189 14321785 TGATCTC 7mer-m8 dme-bantam-3p 3R - 14320525 14320635 3'utr Afti FlyBase G38537.1 AAATGAGTGTGACTGGTTGCCATGATGATCTCCAGGTAATCGCTGGAAAACGAAACCCAATCCGCTCCAGTTCTTGATTATTGTTTTGTTCGTGTTAATGTGTTTTCATTT 117 14320610 0.992688842 13 113 743 0.950819672 2.240549248 0.273224044 0.41025641 0.62295082 117 9 0 174 3R:14320525-14320635 7 108.5 2231 FBgn0038223 625.08 17.01666667 26.15666667 0.173577782 6.376101861 4.14808207 0 0 0 0.2 dme-miR-8-3p 8mer-A1 CAGTATTA 3R 14321636 14321643 - 3R_14321636_14321643_- 0.665340624 0.658343006 0.661841815 0.00494805 Afti FBtr0310001|FBtr0310000|FBtr0273391 14320189|14321075|14321377 14321785|14321785|14321785 3R - 14321469 14321680 3'utr Afti FlyBase G51009.1 TAGGCGAAAGGATCGATCGCGCACCCGGGTAGCCAGTCAGTATTATGAATCCGTCTGATATTCACCATAATCCGAACCGTCACACATTGTAGTTTTGAGGCAAGCTGTGTTCCATGTTGTTGTCGTTGTTGTTAACCTTGTCGTTGGCATAATTGTTGTTGTTGTTGTGCATGCATGTTGTAGTCTTAGGCGTAAAAATCAGGATTTAGAAC 207 14321644 0.93296828 36 192 1460 0.923076923 1.755874856 0.295546559 0.169082126 0.303643725 207 16 3 228 3R:14321469-14321680 8 Afti FBtr0310001|FBtr0310000|FBtr0273391 14320189|14321075|14321377 14321785|14321785|14321785 CAGTATTA 8mer-A1 dme-miR-8-3p 3R - 14321483 14321678 3'utr Afti FlyBase G38542.1 GGCGAAAGGATCGATCGCGCACCCGGGTAGCCAGTCAGTATTATGAATCCGTCTGATATTCACCATAATCCGAACCGTCACACATTGTAGTTTTGAGGCAAGCTGTGTTCCATGTTGTTGTCGTTGTTGTTAACCTTGTCGTTGGCATAATTGTTGTTGTTGTTGTGCATGCATGTTGTAGTCTTAGGCGTAAAAA 124 14321644 0.981708501 25 108 858 0.882926829 2.257678575 0.27804878 0.411290323 0.643902439 124 24 0 181 3R:14321483-14321678 8 70 2232 FBgn0038223 625.08 17.01666667 26.15666667 0.111985666 4.113614104 2.67618198 1 1 1 0.2 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 14327697 14327702 + 3R_14327697_14327702_+ 0.98488046 0.999318236 0.992099348 0.010208996 CG3321 FBtr0082931|FBtr0082932|FBtr0303795 14327535|14327535|14327535 14327735|14327735|14327735 3R + 14327671 14327724 3'utr CG3321 FlyBase G42778.1 CGTTTTTGTGTTTTCCTCTGATGCTTGTGCAAAAAACAGAATGTTCGAAATTAA 15 14327693 0.989141134 6 14 129 0.894736842 1.230448921 0.315789474 0.266666667 0.421052632 15 2 0 17 3R:14327671-14327724 6 CG3321 FBtr0303795|FBtr0082931|FBtr0082932 14327535|14327535|14327535 14327735|14327735|14327735 GTGCAA 6mer3-8 dme-miR-92b-3p 3R + 14327668 14327705 3'utr CG3321 FlyBase G32325.1 TATCGTTTTTGTGTTTTCCTCTGATGCTTGTGCAAAAA 5 14327692 0.984175576 4 5 41 1 0.903089987 0 0.6 0.75 5 0 0 8 3R:14327668-14327705 6 8 2233 FBgn0038224 1345.333333 334.8866667 513.9866667 0.005946482 0.023888679 0.015564606 4 5 4.5 0.2 dme-miR-305-5p 7mer-A1 GTACAAA 3R 14329789 14329795 - 3R_14329789_14329795_- 0.763524719 0.763177127 0.763350923 0.00024579 NK7.1 FBtr0306742 14329411 14330223 3R - 14329783 14329810 3'utr NK7.1 FlyBase G51024.1 ATTTATTGAGTGTTTGTACAAAAAAGGA 32 14329797 0.60890308 3 31 164 0.977272727 1.33243846 0.363636364 0.28125 0.477272727 32 0 1 43 3R:14329783-14329810 7 NK7.1 FBtr0306742 14329411 14330223 GTACAAA 7mer-A1 dme-miR-305-5p 3R - 14329782 14329810 3'utr NK7.1 FlyBase G38550.1 ATTTATTGAGTGTTTGTACAAAAAAGGAA 11 14329797 0.931052901 2 10 61 0.857142857 1.079181246 0.214285714 0.272727273 0.428571429 11 2 0 12 3R:14329782-14329810 7 21.5 2234 FBgn0024321 1080.813333 40.77666667 62.79666667 0.019892427 0.527262323 0.342374861 2 2 2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 14329921 14329927 - 3R_14329921_14329927_- 0.748788338 0.748894909 0.748841623 7.54E-05 NK7.1 FBtr0306742|FBtr0306742|FBtr0306742 14329411|14329411|14329411 14330223|14330223|14330223 3R - 14329816 14329964 3'utr NK7.1 FlyBase G51025.1 CTATGGCAAATTGTAATCTGAACTTTTGAGAATTTCATGTGATAATGTATACGAGGCGATTACAAAATTGATTTTACTACTTGAACTATGAACTATACTATGTATGTAGGCCTGTAAGCTCTGCTACCCTGTAAATTGCAATTGAATGA 50 14329931 0.985662963 17 44 364 0.911764706 1.491361694 0.588235294 0.22 0.426470588 50 5 1 62 3R:14329816-14329964 7 NK7.1 FBtr0306742|FBtr0306742|FBtr0306742 14329411|14329411|14329411 14330223|14330223|14330223 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 14329885 14329962 3'utr NK7.1 FlyBase G38552.1 ATGGCAAATTGTAATCTGAACTTTTGAGAATTTCATGTGATAATGTATACGAGGCGATTACAAAATTGATTTTACTAC 46 14329931 0.988247724 10 38 348 0.825396825 0.937852093 0.492063492 0.304347826 0.492063492 46 6 5 52 3R:14329885-14329962 7 36 2235 FBgn0024321 1080.813333 40.77666667 62.79666667 0.033308249 0.882857844 0.573278836 4 4 4 0.2 dme-miR-263a-5p 6mer3-8 GTGCCA 3R 14330190 14330195 - 3R_14330190_14330195_- 0.942493141 0.935409979 0.93895156 0.005008508 NK7.1 FBtr0306742|FBtr0082941|FBtr0082942|FBtr0347151 14329411|14330138|14330138|14330138 14330223|14330223|14330223|14330223 3R - 14330161 14330212 3'utr NK7.1 FlyBase G51028.1 CACAGTCAAATTAACTTGTGCCAAAAAGTCGAATATTGCTCATCCACAAAGA 12 14330194 0.964303215 3 12 62 1 1.230448921 0 0.333333333 0.529411765 12 0 0 17 3R:14330161-14330212 6 NK7.1 FBtr0347151|FBtr0082942|FBtr0082941|FBtr0306742 14330138|14330138|14330138|14329411 14330223|14330223|14330223|14330223 GTGCCA 6mer3-8 dme-miR-263a-5p 3R - 14330175 14330205 3'utr NK7.1 FlyBase G38554.1 AAATTAACTTGTGCCAAAAAGTCGAATATTG 7 14330195 0.757781504 3 6 33 0.888888889 0.903089987 0 0.142857143 0.333333333 7 1 0 8 3R:14330175-14330205 6 8.5 2236 FBgn0024321 1080.813333 40.77666667 62.79666667 0.007864448 0.208452546 0.135357503 -1 0 -0.5 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 3R 14358544 14358549 - 3R_14358544_14358549_- 0.982738562 0.985578189 0.984158375 0.0020079 CG31320 FBtr0082943 14358354 14358599 3R - 14358537 14358570 5'utr CG31320 FlyBase G51039.1 ATTAGATTTATTTTACCAATTTGTGTTGCAAATT 12 14358550 0.783606642 3 11 143 0.923076923 1.079181246 0 0.083333333 0.153846154 12 1 0 12 3R:14358537-14358570 6 CG31320 FBtr0082943 14358354 14358599 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 14358532 14358566 5'utr CG31320 FlyBase G38560.1 GATTTATTTTACCAATTTGTGTTGCAAATTAAGCT 6 14358549 0.747476916 2 6 62 1 0.954242509 0.222222222 0.5 0.666666667 6 0 0 9 3R:14358532-14358566 6 9 2237 FBgn0051320 281 9.873333333 15.10666667 0.03202847 0.911546253 0.59576346 1 0 0.5 0.2 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3R 14619499 14619505 - 3R_14619499_14619505_- 0.566700065 0.571195993 0.568948029 0.003179081 put FBtr0334030 14619028 14621033 3R - 14619482 14619523 3'utr put FlyBase G51116.1 AATTTGTATATTTTCCATTGGTGCTGAAACATCATTACGACG 36 14619506 0.779326452 2 35 298 0.976744186 1.62324929 0.023255814 0.166666667 0.302325581 36 1 0 42 3R:14619482-14619523 7 put FBtr0334030 14619028 14621033 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3R - 14619488 14619527 3'utr put FlyBase G38611.1 ATTTAATTTGTATATTTTCCATTGGTGCTGAAACATCATT 24 14619506 0.78849297 2 24 213 1 1.531478917 0.029411765 0.333333333 0.529411765 24 0 0 34 3R:14619488-14619527 7 30 2238 FBgn0003169 711.0033333 31.18333333 47.85 0.042193895 0.962052378 0.626959248 1 1 1 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 3R 14620629 14620634 - 3R_14620629_14620634_- 0.955844881 0.948838849 0.952341865 0.004954061 put FBtr0330227|FBtr0082977|FBtr0334030 14620328|14620328|14619028 14621021|14621033|14621033 3R - 14620602 14620700 3'utr put FlyBase G51120.1 AACTTTGAACAAAGAGCATTAGCTATGTCCAGAGACGTGGTAGTTGCTAATCCGACATTGACTTCATTGACTGATAACCATATATAGTTCTATATAAAT 669 14620634 0.717071033 20 623 5039 0.933174224 1.570987458 0.087112172 0.191330344 0.354415274 669 36 20 782 3R:14620602-14620700 6 put FBtr0334030|FBtr0330227|FBtr0082977 14619028|14620328|14620328 14621033|14621021|14621033 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 14620451 14620686 3'utr put FlyBase G38612.1 AGCATTAGCTATGTCCAGAGACGTGGTAGTTGCTAATCCGACATTGACTTCATTGACTGATAACCATATATAGTTCTATATAAATCATACATATAACGTACAATTTGTTTTGCCCTCTGGCAGTAGCCTGTGTGCATATGTAAACTGTTGAAAATTATCGTCAAGCCTTTTAAAGTATAATTTTATTTGTACGTTATCGAATGTCTTCATATAGTAGTAGTTTTATATTTAAAGTT 551 14620634 0.826500775 27 505 4201 0.921857305 1.419262711 0.07587769 0.406533575 0.629671574 551 39 30 814 3R:14620451-14620686 6 573 2239 FBgn0003169 711.0033333 31.18333333 47.85 0.805903395 18.37520043 11.97492163 0 0 0 0.2 dme-miR-980-3p 7mer-A1 GCAGCTA 3R 14620882 14620888 - 3R_14620882_14620888_- 0.823314192 0.823349561 0.823331877 2.50E-05 put FBtr0330227|FBtr0082977|FBtr0334030 14620328|14620328|14619028 14621021|14621033|14621033 3R - 14620860 14621005 3'utr put FlyBase G51122.1 CGGATCTGTGGCTCTGCAAAAAAATCAGTTGAAGCTTTTTGCTTCGTAGTGGATAGTTGATCGTCGAGGTCGTAAGACGTTTCGTTTTTAGTTTAATAGTTTGTAGTACCATTATAAGCAGCTATAGAATGGGTTGATTTATACGA 84 14620881 0.972997113 21 71 721 0.862745098 1.467361417 0.176470588 0.178571429 0.323529412 84 12 2 88 3R:14620860-14621005 7 put FBtr0334030|FBtr0330227|FBtr0082977 14619028|14620328|14620328 14621033|14621021|14621033 GCAGCTA 7mer-A1 dme-miR-980-3p 3R - 14620862 14620916 3'utr put FlyBase G38614.1 AGTTTAATAGTTTGTAGTACCATTATAAGCAGCTATAGAATGGGTTGATTTATAC 38 14620892 0.794423129 12 30 352 0.777777778 1.322219295 0.018518519 0.342105263 0.537037037 38 11 1 42 3R:14620862-14620916 7 43.5 2240 FBgn0003169 711.0033333 31.18333333 47.85 0.061181148 1.394975949 0.909090909 -7 4 -1.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 14642862 14642867 - 3R_14642862_14642867_- 0.895211235 0.875567623 0.885389429 0.013890123 l(3)L1231 FBtr0344158|FBtr0344158|FBtr0344158 14642670|14642670|14642670 14644934|14644934|14644934 3R - 14642836 14642890 3'utr l(3)L1231 FlyBase G51131.1 ATTTTGTAATTTACGTGCATTTTTGTGATCTAATTTGTGTAACTATTATAAACGA 674 14642868 0.652736499 18 646 7278 0.958041958 1.914871818 0.350815851 0.221068249 0.388111888 674 27 9 822 3R:14642836-14642890 6 l(3)L1231 FBtr0344158|FBtr0344158|FBtr0344158 14642670|14642670|14642670 14644934|14644934|14644934 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 14642807 14643189 3'utr l(3)L1231 FlyBase G38623.1 TATGAATTCGTTCTTGAGTTAGTTGATTACCGATTACCGGGTTCACTTGATTACCGATTGAGTTGGCCCGCACTTTACTCTGATCTACTTCGCTGTGCAAGTGACGCGAACAAAATTAATGTCCTTTTTGTAGCGAAACTACAAAACCATGTATTTGATTATATGCTTTAAACCCTATTTTTATAACACTTTAATTTGTAAGAACTGTAGCGATGAACCTACAACCCCGCATCCCTCCAGTAGCCGCCTCTTTTTCACCATTTGAAGTTTTGTCTGTTTTCGGTATGAGGTACAATTTCATTTTGTAATTTACGTGCATTTTTGTGATCTAATTTGTGTAACTATTATAAACGAAAAAAAAAAGAAATACAAAATACTTTAAG 663 14642868 0.990762597 60 621 6423 0.947013487 1.816462259 0.265895954 0.404223228 0.619460501 663 41 14 983 3R:14642807-14643189 6 567 2241 FBgn0086686 1443.953333 29.16666667 44.69666667 0.39267197 19.44 12.68550973 1 1 1 0.2 dme-miR-283-5p 6mer3-8 TGATAT 3R 14643255 14643260 - 3R_14643255_14643260_- 0.997021324 0.99999728 0.998509302 0.00210435 l(3)L1231 FBtr0344158 14642670 14644934 3R - 14643208 14643383 3'utr l(3)L1231 FlyBase G51133.1 ACGTTAATGCACCACCCATGGCACACTCAAACACTTGCATCTTTCATAGGAACTTTCGTTTGGGCATAGCGAAACGATAGAGCAGAAGGAACTACTTTAAAGATAATGGAACTCTGTAAAATATGATATATAATAATTCCCCCACACTCTCACTCTCTATCTCTAAAACCCTATAT 28 14643269 0.943638896 17 27 173 0.96875 1.491361694 0.125 0.107142857 0.21875 28 1 0 31 3R:14643208-14643383 6 l(3)L1231 FBtr0344158 14642670 14644934 TGATAT 6mer3-8 dme-miR-283-5p 3R - 14643207 14643331 3'utr l(3)L1231 FlyBase G38624.1 CTTTCGTTTGGGCATAGCGAAACGATAGAGCAGAAGGAACTACTTTAAAGATAATGGAACTCTGTAAAATATGATATATAATAATTCCCCCACACTCTCACTCTCTATCTCTAAAACCCTATATA 25 14643287 0.802808474 14 24 161 0.942857143 1.51851394 0.085714286 0.36 0.542857143 25 2 0 33 3R:14643207-14643331 6 4 2242 FBgn0086686 1443.953333 29.16666667 44.69666667 0.002770173 0.137142857 0.089492132 9 27 18 0.2 dme-miR-965-3p 7mer-m8 TACGCTT 3R 14643610 14643616 - 3R_14643610_14643616_- 0.564893722 0.577165813 0.571029768 0.008677685 l(3)L1231 FBtr0344158 14642670 14644934 3R - 14643557 14643656 3'utr l(3)L1231 FlyBase G51134.1 ATATTTATACAACAATACACAAAACAAGCAAGAAAACTGTTACGCTTTAAAATACGATATATACCGCTCACTGGAGACCGATCCCCAAATCACAGCCCTC 854 14643617 0.968733296 12 842 4678 0.986434109 2.229596528 0.076550388 0.162763466 0.307170543 854 9 5 1018 3R:14643557-14643656 7 l(3)L1231 FBtr0344158 14642670 14644934 TACGCTT 7mer-m8 dme-miR-965-3p 3R - 14643508 14643638 3'utr l(3)L1231 FlyBase G38625.1 ACAAAACAAGCAAGAAAACTGTTACGCTTTAAAATACGATATATACCGCTCACTGGAGACCGATCCCCAAATCACAGCCCTCAAGAAAACAAAACAAAAAAATTCACACCCAAACCATTCCATCTCCATCC 604 14643617 0.968729591 13 595 3317 0.982778416 2.330413773 0.09184845 0.324503311 0.531572905 604 12 3 856 3R:14643508-14643638 7 713 2243 FBgn0086686 1443.953333 29.16666667 44.69666667 0.493783271 24.44571429 15.95197256 1 1 1 0.2 dme-miR-988-3p 8mer-A1 ACAAGGGA 3R 14644095 14644102 - 3R_14644095_14644102_- 0.602271031 0.609894236 0.606082634 0.005390416 l(3)L1231 FBtr0344158 14642670 14644934 3R - 14644045 14644129 3'utr l(3)L1231 FlyBase G51138.1 AAACACCAACACACATACATACAACGTACAAGGGACTAGTTTGAAACCGCGAATCGTATTACTAAATATATATACAACTATATAT 330 14644103 0.925916552 13 301 1526 0.920716113 2.255272505 0.046035806 0.151515152 0.283887468 330 30 1 360 3R:14644045-14644129 8 l(3)L1231 FBtr0344158 14642670 14644934 ACAAGGGA 8mer-A1 dme-miR-988-3p 3R - 14644047 14644125 3'utr l(3)L1231 FlyBase G38630.1 ACCAACACACATACATACAACGTACAAGGGACTAGTTTGAAACCGCGAATCGTATTACTAAATATATATACAACTATAT 191 14644103 0.864646904 14 164 922 0.868327402 1.387389826 0.088967972 0.35078534 0.558718861 191 28 9 244 3R:14644047-14644125 8 225.5 2244 FBgn0086686 1443.953333 29.16666667 44.69666667 0.156168482 7.731428571 5.04511895 1 1 1 0.2 dme-miR-932-5p 6mer2-7 GAATTG 3R 14644229 14644234 - 3R_14644229_14644234_- 0.999151764 0.964157324 0.981654544 0.024744848 l(3)L1231 FBtr0344158 14642670 14644934 3R - 14644204 14644294 3'utr l(3)L1231 FlyBase G51140.1 TGTTTAAAAATTTTGTGAACGCATTTACAACAACAACCACAACACCATACACTCAAATGAGAATTGCAAGAACTACGAAAACAAAACAGGT 42 14644230 0.957889115 8 40 193 0.962264151 1.707570176 0.150943396 0.214285714 0.377358491 42 2 0 51 3R:14644204-14644294 6 l(3)L1231 FBtr0344158 14642670 14644934 GAATTG 6mer2-7 dme-miR-932-5p 3R - 14644212 14644293 3'utr l(3)L1231 FlyBase G38631.1 GTTTAAAAATTTTGTGAACGCATTTACAACAACAACCACAACACCATACACTCAAATGAGAATTGCAAGAACTACGAAAACA 14 14644230 0.96623267 5 13 74 0.916666667 1.342422681 0.208333333 0.642857143 0.791666667 14 2 0 22 3R:14644212-14644293 6 16 2245 FBgn0086686 1443.953333 29.16666667 44.69666667 0.011080691 0.548571429 0.357968529 -4 -4 -4 0.2 dme-miR-79-3p 7mer-A1 AGCTTTA 3R 14644451 14644457 - 3R_14644451_14644457_- 0.629539968 0.802634861 0.716087414 0.122396578 l(3)L1231 FBtr0344158 14642670 14644934 3R - 14644348 14644486 3'utr l(3)L1231 FlyBase G51141.1 AGTGAACCAACAAAAGGATTGTAGAGATCAGCTTTATTATACATATAAACGAGAAATTATAAAACAATACCAGAGCAAACAGATAAAATGAAACCGAAATTGTAGGAAATCTAGCAACAAATTTTGAATTCTGAATTAA 32 14644459 0.988820663 10 30 273 0.972222222 1.243038049 0.194444444 0.125 0.222222222 32 0 1 35 3R:14644348-14644486 7 l(3)L1231 FBtr0344158 14642670 14644934 AGCTTTA 7mer-A1 dme-miR-79-3p 3R - 14644437 14644476 3'utr l(3)L1231 FlyBase G38632.1 CAAAAGGATTGTAGAGATCAGCTTTATTATACATATAAAC 7 14644459 0.896624985 2 5 59 0.909090909 0.698970004 0 0.428571429 0.636363636 7 0 1 10 3R:14644437-14644476 7 14.5 2246 FBgn0086686 1443.953333 29.16666667 44.69666667 0.010041876 0.497142857 0.324408979 2 2 2 0.2 dme-miR-278-3p 6mer3-8 CCCACC 3R 14697842 14697847 - 3R_14697842_14697847_- 0.982718762 0.993220451 0.987969607 0.007425823 kibra FBtr0344383 14697687 14698883 3R - 14697713 14697881 3'utr kibra FlyBase G51202.1 TGTTTATGTTTTCACTAACCAGACCCAGCCTCTTCCCACCCCAAAATGTAGCAAGTAGTAGTATGAGTAGAATGAGAGTCGCCACACATATTTTTTCAATACCATAGTAATTTTAGTTGTAATAAATTATATGAAAGTGAACCTGTATATTGTAATTGTGCAATAAACA 30 14697849 0.975370804 14 27 167 0.951219512 1.591064607 0.073170732 0.2 0.414634146 30 2 0 39 3R:14697713-14697881 6 kibra FBtr0344383 14697687 14698883 CCCACC 6mer3-8 dme-miR-278-3p 3R - 14697816 14697868 3'utr kibra FlyBase G38686.1 ACTAACCAGACCCAGCCTCTTCCCACCCCAAAATGTAGCAAGTAGTAGTATGA 13 14697849 0.73934675 4 11 38 0.708333333 1.230448921 0 0.538461538 0.75 13 7 0 17 3R:14697816-14697868 6 11 2247 FBgn0262127 353.3166667 7.533333333 11.64333333 0.031133544 1.460176991 0.944746636 2 2 2 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 3R 14698004 14698009 - 3R_14698004_14698009_- 0.97770146 0.999402561 0.98855201 0.015344995 kibra FBtr0344383 14697687 14698883 3R - 14697978 14698076 3'utr kibra FlyBase G51204.1 CATAAAAGTGAGAGAAAATATAAAATTAAACCTTGTTATGCTTTCCCAAGCGGACCTGTTAAAACTGTTGACTTTGAAACTGTGCCGTGGTGCACTGAG 22 14698003 0.806828484 13 22 151 1 1.397940009 0.2 0.136363636 0.24 22 0 0 25 3R:14697978-14698076 6 kibra FBtr0344383 14697687 14698883 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 14697981 14698051 3'utr kibra FlyBase G38687.1 TTAAACCTTGTTATGCTTTCCCAAGCGGACCTGTTAAAACTGTTGACTTTGAAACTGTGCCGTGGTGCACT 16 14698009 0.983872482 8 15 117 0.961538462 1.397940009 0.153846154 0.375 0.615384615 16 1 0 25 3R:14697981-14698051 6 13.5 2248 FBgn0262127 353.3166667 7.533333333 11.64333333 0.038209349 1.792035398 1.159461781 -6 0 -3 0.2 dme-miR-980-3p 7mer-A1 GCAGCTA 3R 14698372 14698378 - 3R_14698372_14698378_- 0.82330367 0.823180264 0.823241967 8.73E-05 kibra FBtr0344383 14697687 14698883 3R - 14698300 14698514 3'utr kibra FlyBase G51207.1 AAAAACCAAGAAACAAGGAATATCAACACAATAACGCGCACATTGTGCGTTCAATGCCTTCAAATTCATATTGAAACCAACTGTATTCTTAAGACTTGAGCAAAAATTATACGAATGTTTATGAATATTTTTATACGCAGCTAGTTAGGATAGTTAACCCAAGCCACATATACACAAAACGTGAGGAGAACGTAAAATATTTATTATACTGATGG 73 14698383 0.99947005 30 68 537 0.938271605 1.880813592 0.160493827 0.109589041 0.197530864 73 5 0 76 3R:14698300-14698514 7 kibra FBtr0344383 14697687 14698883 GCAGCTA 7mer-A1 dme-miR-980-3p 3R - 14698205 14698473 3'utr kibra FlyBase G38689.1 ATTGTGCGTTCAATGCCTTCAAATTCATATTGAAACCAACTGTATTCTTAAGACTTGAGCAAAAATTATACGAATGTTTATGAATATTTTTATACGCAGCTAGTTAGGATAGTTAACCCAAGCCACATATACACAAAACGTGAGGAGAACGTAAAATATTTATTATACTGATGGATCGATCGACGTCGCGCTCGAATCCAGTCGTTTAGGTTAGTTAGCTTGCGTTTTTGTTAAGCTTAAAACGAATTCTTATACTGTAATTTTTTTTA 41 14698383 0.986053456 23 37 338 0.929824561 1.72427587 0.175438596 0.341463415 0.526315789 41 4 0 53 3R:14698205-14698473 7 23 2249 FBgn0262127 353.3166667 7.533333333 11.64333333 0.06509741 3.053097345 1.97537933 5 5 5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 14725087 14725092 - 3R_14725087_14725092_- 0.93747169 0.867277552 0.902374621 0.049634724 CG7530 FBtr0083021|FBtr0083020|FBtr0333277|FBtr0083019 14724758|14724758|14724758|14724758 14725158|14725158|14725158|14725158 3R - 14725030 14725160 stop_codon CG7530 FlyBase G51234.2 AGAACTTGAAGATCCGAACATCTGAGTTAAGATCCGAAGATCCGAGGAGCGGAGATGGAATCCGGGACTCTAGTAGACTAAAGCTTAGTGTAAATAGTTTATGGGGCGCTCTTTATCCGCTAATAACTAAT 72 14725089 0.853455756 12 68 342 0.962025316 1.880813592 0.455696203 0.097222222 0.17721519 72 3 0 76 3R:14725030-14725160 6 CG7530 FBtr0333277|FBtr0083019|FBtr0083021|FBtr0083020 14724758|14724758|14724758|14724758 14725158|14725158|14725158|14725158 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R - 14725000 14725125 3'utr CG7530 FlyBase G38711.1 GAAGATCCGAGGAGCGGAGATGGAATCCGGGACTCTAGTAGACTAAAGCTTAGTGTAAATAGTTTATGGGGCGCTCTTTATCCGCTAATAACTAATATTTAGTTGTAGTTGTTGACCGATATGATT 49 14725088 0.970372793 10 41 236 0.855072464 1.293730757 0.47826087 0.367346939 0.550724638 49 8 2 59 3R:14725000-14725125 6 43.5 2250 FBgn0038256 709.2933333 50.04333333 76.62666667 0.061328646 0.869246653 0.567687489 -3 -4 -3.5 0.2 dme-miR-980-5p 6mer3-8 GAAAAA 3R 14732766 14732771 - 3R_14732766_14732771_- 0.82924104 0.951364741 0.890302891 0.086354496 eff FBtr0336876|FBtr0083018|FBtr0310554 14732412|14732703|14732703 14733494|14733494|14733494 3R - 14732738 14732795 3'utr eff FlyBase G51245.1 AAAACTACAAATAAAAATCAGCTGGAAAAATTATTATTATTATTATTATATTATATTT 16 14732778 0.963372229 4 14 102 0.894736842 1.230448921 0 0.1875 0.315789474 16 2 0 17 3R:14732738-14732795 6 eff FBtr0083018|FBtr0310554|FBtr0336876 14732703|14732703|14732412 14733494|14733494|14733494 GAAAAA 6mer3-8 dme-miR-980-5p 3R - 14732754 14732854 3'utr eff FlyBase G38719.1 AAAGCTAGACAGCTACCAACAACAGCATCAACATAATAAGTTTAAATACAAAGAAAAACAAAACTACAAATAAAAATCAGCTGGAAAAATTATTATTATTA 10 14732778 0.929790846 6 9 38 1 1.113943352 0 0.2 0.384615385 10 0 0 13 3R:14732754-14732854 6 10 2251 FBgn0011217 11311.32 849.8066667 1308.386667 0.00088407 0.011767382 0.007643001 7 7 7 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 3R 14791755 14791760 + 3R_14791755_14791760_+ 0.999818831 0.999986409 0.99990262 0.000118511 jvl FBtr0305694 14791293 14793735 3R + 14791741 14791773 3'utr jvl FlyBase G42822.1 AATTTAACAATGACTGTGTTGCCAATAGGAGTA 12 14791759 0.649346572 4 11 77 0.928571429 0.812913357 0.142857143 0.166666667 0.285714286 12 0 1 13 3R:14791741-14791773 6 jvl FBtr0305694 14791293 14793735 TGTGTT 6mer3-8 dme-miR-317-3p 3R + 14791741 14791772 3'utr jvl FlyBase G32355.1 AATTTAACAATGACTGTGTTGCCAATAGGAGT 12 14791758 0.667274197 5 11 74 0.941176471 1.204119983 0.176470588 0.25 0.470588235 12 1 0 16 3R:14791741-14791772 6 12 2252 FBgn0263929 908.0433333 17.64333333 26.93 0.013215228 0.680143586 0.445599703 -4 -3 -3.5 0.2 dme-miR-34-5p 7mer-m8 CACTGCC 3R 14792248 14792254 + 3R_14792248_14792254_+ 0.673395611 0.70542493 0.68941027 0.022648135 jvl FBtr0305694 14791293 14793735 3R + 14792179 14792271 3'utr jvl FlyBase G42823.1 TGCTATTGCTTTGGGTTTGGGTCGTTGACTCAACACTTGGCTAGTGAAAGGTGCATCCTATCAAACTCTCACTGCCTATCGATGCCTTAGGTG 15 14792247 0.973657867 6 15 94 1 1.255272505 0.277777778 0.2 0.333333333 15 0 0 18 3R:14792179-14792271 7 jvl FBtr0305694 14791293 14793735 CACTGCC 7mer-m8 dme-miR-34-5p 3R + 14792233 14792258 3'utr jvl FlyBase G32356.1 ATCCTATCAAACTCTCACTGCCTATC 5 14792247 0.746062544 2 5 27 1 0.903089987 0 0.6 0.75 5 0 0 8 3R:14792233-14792258 7 6 2253 FBgn0263929 908.0433333 17.64333333 26.93 0.006607614 0.340071793 0.222799851 1 1 1 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 14792541 14792547 + 3R_14792541_14792547_+ 0.566443096 0.56495491 0.565699003 0.001052316 jvl FBtr0305694 14791293 14793735 3R + 14792516 14792577 3'utr jvl FlyBase G42824.1 ATTGTTGGATCAGCCAGTTTCTCATTGTGTTCGAAAGTGAGTTTAAGCATAATTATTAGTTT 472 14792540 0.752758835 9 463 4416 0.980802792 2.272615061 0.422338569 0.167372881 0.314136126 472 9 2 562 3R:14792516-14792577 7 jvl FBtr0305694 14791293 14793735 TGTGTTC 7mer-m8 dme-miR-317-3p 3R + 14792515 14792563 3'utr jvl FlyBase G32357.1 CATTGTTGGATCAGCCAGTTTCTCATTGTGTTCGAAAGTGAGTTTAAGC 270 14792540 0.745441033 9 267 2446 0.990384615 2.31386722 0.408653846 0.374074074 0.59375 270 3 1 412 3R:14792515-14792563 7 367 2254 FBgn0263929 908.0433333 17.64333333 26.93 0.404165734 20.801058 13.62792425 1 1 1 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 3R 14793554 14793559 + 3R_14793554_14793559_+ 0.951093917 0.941968012 0.946530965 0.006452986 jvl FBtr0305690|FBtr0305694|FBtr0305693 14793489|14791293|14793489 14795868|14793735|14795868 3R + 14793523 14793613 3'utr jvl FlyBase G42826.1 CCATATTCGTGGACTAAAGGTGGTGTACTGATTGACTGATTGATTGACGTGTTGGTGGTGAATACATATATTTCGACTGCATGCCAAAAAT 22 14793554 0.985002362 8 22 178 1 1.414973348 0.538461538 0.181818182 0.307692308 22 0 0 26 3R:14793523-14793613 6 jvl FBtr0305691|FBtr0305689|FBtr0305694|FBtr0305690|FBtr0305693 14793489|14793489|14791293|14793489|14793489 14793607|14793607|14793735|14795868|14795868 TTGACT 6mer3-8 dme-miR-1012-3p 3R + 14793531 14793571 3'utr jvl FlyBase G32359.1 GTGGACTAAAGGTGGTGTACTGATTGACTGATTGATTGACG 12 14793554 0.953379137 4 12 99 1 1.255272505 0.5 0.416666667 0.611111111 12 0 0 18 3R:14793531-14793571 6 14 2255 FBgn0263929 908.0433333 17.64333333 26.93 0.015417766 0.79350085 0.51986632 0 0 0 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 3R 14889144 14889149 - 3R_14889144_14889149_- 0.998321359 0.999404986 0.998863173 0.000766221 CycC FBtr0083010 14889002 14889193 3R - 14889100 14889182 3'utr CycC FlyBase G51267.1 AATCATTCATCATTAGCTGGTATTGCCCAATTGTGTGTTTGTACTCATATTACCAATGTATTTATGCCAATTAAACGAAAGTT 16 14889152 0.937424872 9 14 149 0.904761905 0.801632346 0.095238095 0.1875 0.380952381 16 0 2 19 3R:14889100-14889182 6 CycC FBtr0083010 14889002 14889193 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 14889096 14889170 3'utr CycC FlyBase G38736.1 TTAGCTGGTATTGCCCAATTGTGTGTTTGTACTCATATTACCAATGTATTTATGCCAATTAAACGAAAGTTTAAG 15 14889152 0.990981206 6 15 155 1 1.278753601 0.210526316 0.266666667 0.421052632 15 0 0 19 3R:14889096-14889170 6 10 2256 FBgn0004597 134.3233333 14.61666667 22.44333333 0.074447229 0.684150513 0.445566612 3 3 3 0.2 dme-miR-14-3p 7mer-A1 AGACTGA 3R 14896416 14896422 + 3R_14896416_14896422_+ 0.822578278 0.823144432 0.822861355 0.000400293 CG14860 FBtr0289976 14895685 14896446 3R + 14896374 14896437 3'utr CG14860 FlyBase G42849.1 ACTGGCGGAAGAGTCCACTAAAAACACAAGAGACTAGACTTTAGACTGACTGAATAAATGTAAC 25 14896414 0.964034274 6 25 129 1 1.431363764 0.259259259 0.08 0.148148148 25 0 0 27 3R:14896374-14896437 7 CG14860 FBtr0289976 14895685 14896446 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 14896391 14896437 3'utr CG14860 FlyBase G32381.1 CTAAAAACACAAGAGACTAGACTTTAGACTGACTGAATAAATGTAAC 19 14896414 0.959361002 5 19 95 1 1.491361694 0.096774194 0.526315789 0.709677419 19 0 0 31 3R:14896391-14896437 7 21.5 2257 FBgn0038273 26.21 2.003333333 3.093333333 0.820297596 10.73211314 6.950431034 2 2 2 0.2 dme-miR-980-3p 6mer3-8 GGCAGC 3R 14902401 14902406 - 3R_14902401_14902406_- 0.700052606 0.989643085 0.844847846 0.204771406 VhaPPA1-1 FBtr0083005|FBtr0308030 14902328|14902328 14903233|14903233 3R - 14902342 14902422 3'utr VhaPPA1-1 FlyBase G51287.1 TCAAGCTACTGTTTGAGGCAGCAGTTGTAGATGGTTGCACAGTCGCATTATTATTATTATAGAAAGTATTCCATATTAAAA 20 14902409 0.992721159 7 14 166 0.782608696 1.255272505 0.304347826 0.1 0.217391304 20 5 0 18 3R:14902342-14902422 6 VhaPPA1-1 FBtr0308030|FBtr0083005 14902328|14902328 14903233|14903233 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 14902318 14902455 3'utr VhaPPA1-1 FlyBase G38747.1 ATTTACTACCGCAAAACGATAAACTTGTATATTTCAAGCTACTGTTTGAGGCAGCAGTTGTAGATGGTTGCACAGTCGCATTATTATTATTATAGAAAGTATTCCATATTAAAACAAATAAAATATATACGTTTTGTT 25 14902410 0.986804833 14 24 203 0.96969697 1.505149978 0.212121212 0.28 0.454545455 25 1 0 32 3R:14902318-14902455 6 11.5 2258 FBgn0028662 780.9733333 70.53333333 107.34 0.014725215 0.163043478 0.107136203 3 4 3.5 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 3R 14902524 14902529 - 3R_14902524_14902529_- 0.939022144 0.991789565 0.965405855 0.037312257 VhaPPA1-1 FBtr0083005|FBtr0308030 14902328|14902328 14903233|14903233 3R - 14902508 14902626 3'utr VhaPPA1-1 FlyBase G51289.1 ATCACTCAATCGACTGTGGAGTGTGCACGGTGTGAAAACGACCGTGATTTGTTTATTTCATTTCTTTGCCAAACGAAAGACATCGTGTGTGTGTGTCTGTGTTTGATTTTAAGCAGTTT 34 14902533 0.949568744 16 32 274 0.947368421 1.556302501 0.184210526 0.117647059 0.210526316 34 2 0 36 3R:14902508-14902626 6 VhaPPA1-1 FBtr0308030|FBtr0083005 14902328|14902328 14903233|14903233 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 14902510 14902550 3'utr VhaPPA1-1 FlyBase G38749.1 AAGACATCGTGTGTGTGTGTCTGTGTTTGATTTTAAGCAGT 7 14902533 0.847637649 5 7 79 1 1.079181246 0 0.285714286 0.583333333 7 0 0 12 3R:14902510-14902550 6 9 2259 FBgn0028662 780.9733333 70.53333333 107.34 0.011524081 0.127599244 0.083845724 4 4 4 0.2 dme-miR-965-3p 6mer2-7 ACGCTT 3R 14902713 14902718 - 3R_14902713_14902718_- 0.999999192 0.999999996 0.999999594 5.66E-07 VhaPPA1-1 FBtr0083005|FBtr0308030 14902328|14902328 14903233|14903233 3R - 14902631 14902791 3'utr VhaPPA1-1 FlyBase G51290.1 GGAAATTACGACTCGCTATACGCAGTTACTGCTTGCAGGAGACGCCCGACAAACCGAAATCCGATCAGCCGTAACGCTTTAAACTAGGACTTAGTTACTCATTAAGATGATAGTTGGTTAAGTTGGCAGTTGGTTTTCACGCCTCGCACGCTCGCAGTCAC 128 14902712 0.858986765 26 119 899 0.935064935 1.681241237 0.155844156 0.1640625 0.305194805 128 8 2 144 3R:14902631-14902791 6 VhaPPA1-1 FBtr0308030|FBtr0083005 14902328|14902328 14903233|14903233 ACGCTT 6mer2-7 dme-miR-965-3p 3R - 14902667 14902793 3'utr VhaPPA1-1 FlyBase G38752.1 TTGGAAATTACGACTCGCTATACGCAGTTACTGCTTGCAGGAGACGCCCGACAAACCGAAATCCGATCAGCCGTAACGCTTTAAACTAGGACTTAGTTACTCATTAAGATGATAGTTGGTTAAGTTG 65 14902720 0.931094502 21 61 433 0.913043478 1.62324929 0.195652174 0.323076923 0.52173913 65 7 1 84 3R:14902667-14902793 6 59 2260 FBgn0028662 780.9733333 70.53333333 107.34 0.075546754 0.836483932 0.549655301 -6 2 -2 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 15079704 15079710 - 3R_15079704_15079710_- 0.589331821 0.398716428 0.494024124 0.134785442 CG6966 FBtr0344380 15079318 15081197 3R - 15079689 15079732 3'utr CG6966 FlyBase G51299.1 TGTGCATGTGTCTAGCCACCAATGTGTTCTGAAATGCAATTCGA 87 15079710 0.808859472 10 58 715 0.684210526 1.034762106 0.336842105 0.08045977 0.157894737 87 25 5 65 3R:15079689-15079732 7 CG6966 FBtr0344380 15079318 15081197 TGTGTTC 7mer-m8 dme-miR-317-3p 3R - 15079682 15079733 3'utr CG6966 FlyBase G38756.1 ATGTGCATGTGTCTAGCCACCAATGTGTTCTGAAATGCAATTCGATGTGCAT 66 15079709 0.820935604 11 39 543 0.59223301 1.086359831 0.466019417 0.424242424 0.631067961 66 38 4 61 3R:15079682-15079733 7 75.5 2261 FBgn0038286 1338.856667 38.3 58.94666667 0.056391399 1.971279373 1.280818819 0 -1 -0.5 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 15080753 15080759 - 3R_15080753_15080759_- 0.651138365 0.566366626 0.608752496 0.059942715 CG6966 FBtr0344380|FBtr0113236 15079318|15080451 15081197|15081197 3R - 15080602 15080782 3'utr CG6966 FlyBase G51302.1 ATGTTTTGAAACTTTCTTTAATATGTGTTCTTGCTACAACATTTTGTATGACTTATCATTAATAGAATATTGTATGTACTTGTACTATATGACCAAAAGCCTGGGCGTGATTGAGCAGCTTAATTTTAATTATCCTGGCATCAAGCCGACTCCTCAACGCTGCAGCAATCACGCCCAAGCC 80 15080752 0.900498151 22 76 655 0.950980392 1.685741739 0.019607843 0.2125 0.382352941 80 4 1 97 3R:15080602-15080782 7 CG6966 FBtr0344380|FBtr0113236 15079318|15080451 15081197|15081197 TGTGTTC 7mer-m8 dme-miR-317-3p 3R - 15080662 15080783 3'utr CG6966 FlyBase G38759.1 AATGTTTTGAAACTTTCTTTAATATGTGTTCTTGCTACAACATTTTGTATGACTTATCATTAATAGAATATTGTATGTACTTGTACTATATGACCAAAAGCCTGGGCGTGATTGAGCAGCTT 50 15080752 0.876621769 18 49 466 0.971428571 1.832508913 0.071428571 0.34 0.528571429 50 2 0 68 3R:15080662-15080783 7 25 2262 FBgn0038286 1338.856667 38.3 58.94666667 0.018672649 0.652741514 0.424112192 -7 -7 -7 0.2 dme-miR-11-3p 7mer-m1 TGTGATG 3R 15080947 15080953 - 3R_15080947_15080953_- 0.565787854 0.580225707 0.573006781 0.010209066 CG6966 FBtr0344380|FBtr0113236 15079318|15080451 15081197|15081197 3R - 15080893 15081078 3'utr CG6966 FlyBase G51303.1 TATCTAATACTACTATGACTACCGTCTATTTACTGTATAATTAGAGATGGAGAGAGAGTTCGAAACTATGCTGAATGATGAATGATGATATGGACGAGATCGTTACTAACGACTGGAAACTGATTTGTGATGTTAGCAAGCGAAGTGCCTGAATCGACGGATCAGGACGATAACTACTACAACTGA 783 15080955 0.979421794 36 718 4953 0.92513369 1.895623422 0.28342246 0.153256705 0.290909091 783 60 10 865 3R:15080893-15081078 7 CG6966 FBtr0344380|FBtr0113236 15079318|15080451 15081197|15081197 TGTGATG 7mer-m1 dme-miR-11-3p 3R - 15080891 15081048 3'utr CG6966 FlyBase G38760.1 TACTGTATAATTAGAGATGGAGAGAGAGTTCGAAACTATGCTGAATGATGAATGATGATATGGACGAGATCGTTACTAACGACTGGAAACTGATTTGTGATGTTAGCAAGCGAAGTGCCTGAATCGACGGATCAGGACGATAACTACTACAACTGACA 541 15080955 0.976444114 29 503 3251 0.931456548 2.103233406 0.298653611 0.390018484 0.596083231 541 51 5 761 3R:15080891-15081048 7 283.5 2263 FBgn0038286 1338.856667 38.3 58.94666667 0.211747835 7.402088773 4.809432255 2 2 2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 15096529 15096535 - 3R_15096529_15096535_- 0.680647874 0.678754127 0.679701 0.001339119 CG42788 FBtr0303485|FBtr0303485|FBtr0303485|FBtr0303486|FBtr0303486|FBtr0303486 15095955|15095955|15095955|15095955|15095955|15095955 15097627|15097627|15097627|15097627|15097627|15097627 3R - 15096512 15096551 3'utr CG42788 FlyBase G51320.1 AATCAAAATTTTAACTTGTGATATAAAAAAATGGAAAAAG 23 15096536 0.986396303 4 22 191 0.962962963 1.113943352 0 0.173913043 0.296296296 23 0 1 26 3R:15096512-15096551 7 CG42788 FBtr0303486|FBtr0303486|FBtr0303486|FBtr0303485|FBtr0303485|FBtr0303485 15095955|15095955|15095955|15095955|15095955|15095955 15097627|15097627|15097627|15097627|15097627|15097627 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 15096516 15096554 3'utr CG42788 FlyBase G38768.1 AATAATCAAAATTTTAACTTGTGATATAAAAAAATGGAA 21 15096537 0.664596539 6 20 179 0.96875 1.190331698 0 0.333333333 0.5625 21 0 1 31 3R:15096516-15096554 7 22 2264 FBgn0261859 601.7 10.87666667 16.7 0.036563071 2.022678517 1.317365269 1 2 1.5 0.2 dme-miR-283-5p 6mer3-8 TGATAT 3R 15191142 15191147 - 3R_15191142_15191147_- 0.477122839 0.838730661 0.65792675 0.255695398 CG6752 FBtr0306246|FBtr0083029 15191056|15191056 15191305|15191305 3R - 15191101 15191173 3'utr CG6752 FlyBase G51358.1 TATGCTTGCCATTATAAGTTCAGATGTGATATGCCGAAAGTGCAATGAAAAGAAGTTTAAATAATGAGCTATT 23 15191142 0.981720688 7 19 130 0.884615385 1.361727836 0.192307692 0.086956522 0.192307692 23 3 0 23 3R:15191101-15191173 6 CG6752 FBtr0306246|FBtr0083029 15191056|15191056 15191305|15191305 TGATAT 6mer3-8 dme-miR-283-5p 3R - 15191128 15191159 3'utr CG6752 FlyBase G38806.1 TAAGTTCAGATGTGATATGCCGAAAGTGCAAT 14 15191142 0.783931973 4 10 69 0.736842105 1.146128036 0.105263158 0.384615385 0.578947368 13 5 0 14 3R:15191128-15191159 6 16 2265 FBgn0038296 195.79 5.47 8.353333333 0.08172021 2.925045704 1.915403033 -5 -5 -5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 15191257 15191264 - 3R_15191257_15191264_- 0.627922984 0.623705035 0.625814009 0.002982576 CG6752 FBtr0306246|FBtr0083029 15191056|15191056 15191305|15191305 3R - 15191236 15191306 stop_codon CG6752 FlyBase G51359.1 AGGAAAAACCCACCGATAGCAATCAAGGAAAGCCCAACCAAATCTAGTCAAACTCCTATGCTTTAAGTGTA 25 15191264 0.943774718 7 22 90 0.888888889 1.079181246 0.222222222 0.08 0.148148148 25 2 1 24 3R:15191236-15191306 8 CG6752 FBtr0306246|FBtr0083029 15191056|15191056 15191305|15191305 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R - 15191236 15191336 stop_codon CG6752 FlyBase G38807.1 AGTCCAGACGCCAATGATCGAGCGGGCCTAAGGAAAAACCCACCGATAGCAATCAAGGAAAGCCCAACCAAATCTAGTCAAACTCCTATGCTTTAAGTGTA 12 15191264 0.936155972 5 9 38 0.888888889 0.903089987 0.166666667 0.5 0.666666667 12 1 1 16 3R:15191236-15191336 8 12.5 2266 FBgn0038296 195.79 5.47 8.353333333 0.063843914 2.285191956 1.496408619 0 0 0 0.2 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3R 15202886 15202892 + 3R_15202886_15202892_+ 0.633104585 0.808661072 0.720882829 0.124137192 CG42542 FBtr0301101|FBtr0301101|FBtr0301104|FBtr0301104|FBtr0301102|FBtr0301102|FBtr0302325|FBtr0302325|FBtr0301103|FBtr0301103|FBtr0302324|FBtr0302324 15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444 15202977|15202977|15202977|15202977|15202977|15202977|15202973|15202973|15202977|15202977|15203074|15203074 3R + 15202823 15202897 3'utr CG42542 FlyBase G42873.1 GAGTTGTATCCTTTCCTTCATAACGCAGATCCTTATTCGCATATTTGTTTACGTAGCCGTGTTTACTTAATGGAA 7 15202884 0.915389841 6 6 68 0.857142857 0.77815125 0 0 0 7 1 0 6 3R:15202823-15202897 7 CG42542 FBtr0302325|FBtr0302325|FBtr0301102|FBtr0301102|FBtr0301104|FBtr0301104|FBtr0301101|FBtr0301101|FBtr0302324|FBtr0302324|FBtr0301103|FBtr0301103 15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444|15202444 15202973|15202973|15202977|15202977|15202977|15202977|15202977|15202977|15203074|15203074|15202977|15202977 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3R + 15202869 15202902 3'utr CG42542 FlyBase G32398.1 GTTTACGTAGCCGTGTTTACTTAATGGAAACAAC 8 15202883 0.81190218 4 7 54 1 1.204119983 0.125 0.625 0.8125 8 0 0 16 3R:15202869-15202902 7 5 2267 FBgn0260659 161.8666667 9.733333333 14.87666667 0.030889621 0.51369863 0.336096796 2 3 2.5 0.2 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3R 15222197 15222203 + 3R_15222197_15222203_+ 0.658357922 0.808490373 0.733424147 0.106159709 CG12241 FBtr0083051|FBtr0083051 15221954|15221954 15222371|15222371 3R + 15222121 15222226 3'utr CG12241 FlyBase G42898.1 TAAGTGCTTTACCATAACGATCTGTAGCTGTAACTATACCTTTAAAACGCCCTATGTATAGCTCGAGCCGTTTGTTTACTTAATGTCCATCCATTATTATAAATCC 31 15222214 0.791892975 16 28 255 0.885714286 1.491361694 0.085714286 0.129032258 0.228571429 31 4 0 31 3R:15222121-15222226 7 CG12241 FBtr0083051|FBtr0083051 15221954|15221954 15222371|15222371 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3R + 15222104 15222217 3'utr CG12241 FlyBase G32411.1 TTGTCGTACACCTAACTTAAGTGCTTTACCATAACGATCTGTAGCTGTAACTATACCTTTAAAACGCCCTATGTATAGCTCGAGCCGTTTGTTTACTTAATGTCCATCCATTAT 24 15222193 0.98696807 14 21 188 0.857142857 1.477121255 0.114285714 0.291666667 0.514285714 24 5 0 30 3R:15222104-15222217 7 9.5 2268 FBgn0038304 479.84 19.50666667 29.96333333 0.019798266 0.487012987 0.317054177 -17 4 -6.5 0.2 dme-miR-277-3p 7mer-m8 TGCATTT 3R 15222341 15222347 + 3R_15222341_15222347_+ 0.473312548 0.480844966 0.477078757 0.005326282 CG12241 FBtr0083051 15221954 15222371 3R + 15222325 15222363 3'utr CG12241 FlyBase G42899.1 TGTTTAACTGTCTAAATGCATTTCATTAAAGTTTAATAT 6 15222341 0.827373312 2 6 62 1 0.77815125 0 0 0 6 0 0 6 3R:15222325-15222363 7 CG12241 FBtr0083051 15221954 15222371 TGCATTT 7mer-m8 dme-miR-277-3p 3R + 15222316 15222363 3'utr CG12241 FlyBase G32412.1 ACACATAGATGTTTAACTGTCTAAATGCATTTCATTAAAGTTTAATAT 5 15222341 0.988230361 2 5 50 1 1 0 0.6 0.8 5 0 0 10 3R:15222316-15222363 7 5.5 2269 FBgn0038304 479.84 19.50666667 29.96333333 0.011462154 0.281954887 0.183557682 0 0 0 0.2 dme-miR-317-3p 8mer-A1 TGTGTTCA 3R 15257050 15257057 + 3R_15257050_15257057_+ 0.607375049 0.608542568 0.607958809 0.000825618 CG42404 FBtr0305614|FBtr0345173 15255666|15252205 15257765|15257765 3R + 15257013 15257074 3'utr CG42404 FlyBase G42920.1 TTTTGGTTGTAATAGATCTCTGACCTGAAAACTGTATTGTGTTCAACGGATGCTCAAAAAAA 30 15257049 0.709878547 4 30 231 1 1.568201724 0.297297297 0.2 0.351351351 30 0 0 37 3R:15257013-15257074 8 CG42404 FBtr0345173|FBtr0305614 15252205|15255666 15257765|15257765 TGTGTTCA 8mer-A1 dme-miR-317-3p 3R + 15256994 15257071 3'utr CG42404 FlyBase G32430.1 AAAACGGTTCCTGTTCCGCTTTTGGTTGTAATAGATCTCTGACCTGAAAACTGTATTGTGTTCAACGGATGCTCAAAA 28 15257049 0.982652144 5 28 218 1 1.612783857 0.219512195 0.392857143 0.585365854 28 0 0 41 3R:15256994-15257071 8 21.5 2270 FBgn0259823 5.333333333 0.116666667 0.176666667 4.03125 184.2857143 121.6981132 1 1 1 0.2 dme-miR-980-3p 6mer3-8 GGCAGC 3R 15258305 15258310 - 3R_15258305_15258310_- 0.669475299 0.761402194 0.715438746 0.065002134 eIF-2gamma FBtr0337054|FBtr0310386|FBtr0310387 15257842|15257982|15257982 15258366|15258366|15258366 3R - 15258262 15258334 3'utr eIF-2gamma FlyBase G51437.2 AAGAACAACATCAGCGGCAAAAGTGGCAGCATCATCTTTATTAGGCCTCTTCACACTGCTCCTTCTTGTCCCA 37 15258311 0.960374812 11 36 146 1 1.602059991 0.125 0.054054054 0.125 37 0 0 40 3R:15258262-15258334 6 eIF-2gamma FBtr0310386|FBtr0337054|FBtr0310387 15257982|15257842|15257982 15258366|15258366|15258366 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 15258218 15258329 3'utr eIF-2gamma FlyBase G38860.1 CAACATCAGCGGCAAAAGTGGCAGCATCATCTTTATTAGGCCTCTTCACACTGCTCCTTCTTGTCCCACAGCTCCATTCTTCCCGTGTCCGTTGATCAAACCGAAACTAATT 28 15258311 0.966559253 12 27 143 0.973684211 1.267171728 0.078947368 0.321428571 0.5 28 0 1 37 3R:15258218-15258329 6 19.5 2271 FBgn0263740 1282.026667 78.22 119.4766667 0.015210292 0.249296855 0.163211785 1 1 1 0.2 dme-miR-92b-3p 7mer-m1 TGCAATT 3R 15265039 15265045 + 3R_15265039_15265045_+ 0.707178575 0.745699195 0.726438885 0.027238177 Set FBtr0083062 15265028 15265253 3R + 15265024 15265055 stop_codon Set FlyBase G42925.1 AAGTAAACTGATTAATGCAATTTCAAATCGCT 23 15265035 0.738934862 5 23 157 1 1.447158031 0.035714286 0.217391304 0.357142857 23 0 0 28 3R:15265024-15265055 7 Set FBtr0083062 15265028 15265253 TGCAATT 7mer-m1 dme-miR-92b-3p 3R + 15265024 15265051 stop_codon Set FlyBase G32436.1 AAGTAAACTGATTAATGCAATTTCAAAT 13 15265035 0.657963821 4 12 89 0.9375 1.176091259 0 0.153846154 0.3125 13 1 0 15 3R:15265024-15265051 7 18 2272 FBgn0014879 1526.92 162.5266667 250.57 0.011788437 0.110751056 0.071836213 4 4 4 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 15270283 15270289 + 3R_15270283_15270289_+ 0.657651621 0.658596338 0.65812398 0.000668004 Zip88E FBtr0290018 15270194 15270532 3R + 15270189 15270310 stop_codon Zip88E FlyBase G42935.1 GGATTAGACATCTTTTCGTTGAGAAATCGTTTCAGCGCTGTGAGAAAATGTGCCGCTTTTTAAACTTAGAACACTTAGGATAATATTATGGATTGGCAGCTGTTAATCTCTTGTGTAAGACT 91 15270282 0.836167379 17 84 783 0.912621359 1.371067862 0.126213592 0.098901099 0.203883495 91 6 3 94 3R:15270189-15270310 7 Zip88E FBtr0290018 15270194 15270532 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 15270184 15270321 stop_codon Zip88E FlyBase G32446.1 GATGAGGATTAGACATCTTTTCGTTGAGAAATCGTTTCAGCGCTGTGAGAAAATGTGCCGCTTTTTAAACTTAGAACACTTAGGATAATATTATGGATTGGCAGCTGTTAATCTCTTGTGTAAGACTTGTTACTTGTG 75 15270281 0.836996111 22 73 663 0.971962617 2.017033339 0.121495327 0.346666667 0.542056075 75 3 0 104 3R:15270184-15270321 7 51.5 2273 FBgn0038312 158.6266667 12.80333333 19.79 0.324661679 4.022390003 2.602324406 1 2 1.5 0.2 dme-miR-184-5p 6mer2-7 GATAAG 3R 15270368 15270373 + 3R_15270368_15270373_+ 0.988442328 0.968792364 0.978617346 0.013894578 Zip88E FBtr0290018 15270194 15270532 3R + 15270329 15270464 3'utr Zip88E FlyBase G42936.1 AACTAATCTTGTTTTAGGTACATTGTCGATCTGCCGTAGGATAAGTAAAAAGTTCAGTCTTCTCGTCTACATTTATATTTTCTCTTTCTCCAAAGTTTGTGTTATTTTTTATGCTTTTATTATATGTAATAAACCT 32 15270351 0.987003131 12 28 269 0.942857143 1.51851394 0.2 0.129032258 0.228571429 31 2 0 33 3R:15270329-15270464 6 Zip88E FBtr0290018 15270194 15270532 GATAAG 6mer2-7 dme-miR-184-5p 3R + 15270337 15270383 3'utr Zip88E FlyBase G32447.1 TTGTTTTAGGTACATTGTCGATCTGCCGTAGGATAAGTAAAAAGTTC 15 15270351 0.672447414 5 14 114 1 1.447158031 0.071428571 0.6 0.785714286 15 0 0 28 3R:15270337-15270383 6 14 2274 FBgn0038312 158.6266667 12.80333333 19.79 0.088257544 1.093465243 0.707427994 17 17 17 0.2 dme-miR-2b-2-5p 6mer2-7 TGAAGA 3R 15270928 15270933 - 3R_15270928_15270933_- 0.999392015 0.99008423 0.994738122 0.006581608 Cp190 FBtr0083127|FBtr0083126 15270430|15270430 15271042|15271042 3R - 15270863 15271020 3'utr Cp190 FlyBase G51457.1 AAGTTTGGCGATTCAACGCAGGTCAGCAGATAAACGCACCTGAGCTCGGCGCGAATTTTCGGTTTCTATTGTAAATTAAATTGTTAATGAAGATCAAGGTGAATGATAAGATATGCATATGCACTGGTTTAAGTGTATAAGATCTAATCTACTCATCT 82 15270933 0.858714814 25 82 444 1 1.995635195 0.050505051 0.146341463 0.292929293 82 0 0 99 3R:15270863-15271020 6 Cp190 FBtr0083126|FBtr0083127 15270430|15270430 15271042|15271042 TGAAGA 6mer2-7 dme-miR-2b-2-5p 3R - 15270884 15271006 3'utr Cp190 FlyBase G38876.1 AACGCAGGTCAGCAGATAAACGCACCTGAGCTCGGCGCGAATTTTCGGTTTCTATTGTAAATTAAATTGTTAATGAAGATCAAGGTGAATGATAAGATATGCATATGCACTGGTTTAAGTGTA 37 15270933 0.974210245 8 35 190 1 1.748188027 0.053571429 0.378378378 0.589285714 37 0 0 56 3R:15270884-15271006 6 34.5 2275 FBgn0000283 4864.516667 141.61 217.1233333 0.007092174 0.243626863 0.158895866 0 0 0 0.2 dme-miR-980-3p 8mer-A1 GGCAGCTA 3R 15304166 15304173 + 3R_15304166_15304173_+ 0.615734325 0.616890327 0.616312326 0.000817415 Tm1 FBtr0089968|FBtr0089960 15303722|15303722 15304972|15304529 3R + 15304115 15304199 5'utr Tm1 FlyBase G42962.1 CGATTACGTCGATATTTTCGATACCATTTCGCAAAATTCGAACGGTTGACTGGCAGCTAGCGCCATTTTACTATACTGTTGCAAT 881 15304165 0.945565852 9 863 3587 0.977055449 2.106360909 0.078393881 0.157775255 0.290630975 881 17 7 1022 3R:15304115-15304199 8 Tm1 FBtr0089960|FBtr0089968 15303722|15303722 15304529|15304972 GGCAGCTA 8mer-A1 dme-miR-980-3p 3R + 15304102 15304187 5'utr Tm1 FlyBase G32465.2 ATTTCGATATTTTCGATTACGTCGATATTTTCGATACCATTTCGCAAAATTCGAACGGTTGACTGGCAGCTAGCGCCATTTTACTA 536 15304165 0.864957285 10 527 2046 0.984486874 2.615423953 0.076372315 0.391791045 0.61097852 536 12 1 825 3R:15304102-15304187 8 704 2276 FBgn0003721 5849.68 316.09 484.7266667 0.120348464 2.227213768 1.452364907 1 1 1 0.2 dme-bantam-3p 6mer3-8 TGATCT 3R 15304848 15304853 + 3R_15304848_15304853_+ 0.999288272 0.999882223 0.999585247 0.000419951 Tm1 FBtr0089968 15303722 15304972 3R + 15304815 15304887 3'utr Tm1 FlyBase G42966.1 CTGCAACAAGAAATGGCATTAAAAATTCTAATTTGATCTATTTACGATTTACATAAATTAATTATTTATACTT 55 15304847 0.990927098 10 53 558 0.971014493 1.826074803 0.014492754 0.218181818 0.376811594 55 2 0 67 3R:15304815-15304887 6 Tm1 FBtr0089968 15303722 15304972 TGATCT 6mer3-8 dme-bantam-3p 3R + 15304772 15304888 3'utr Tm1 FlyBase G32470.1 TGATTCTGAATGCCGTGACACCCAAATGAAGATAAAACGAATGCTGCAACAAGAAATGGCATTAAAAATTCTAATTTGATCTATTTACGATTTACATAAATTAATTATTTATACTTT 44 15304847 0.988145618 12 41 379 0.953125 1.484299839 0.015625 0.363636364 0.5625 44 2 1 61 3R:15304772-15304888 6 41.5 2277 FBgn0003721 5849.68 316.09 484.7266667 0.007094405 0.131291721 0.085615261 1 1 1 0.2 dme-miR-1008-3p 6mer2-7 GCTGTG 3R 15318315 15318320 - 3R_15318315_15318320_- 0.998851882 0.982459709 0.990655795 0.011591036 CG6276 FBtr0083123 15318201 15318439 3R - 15318263 15318338 3'utr CG6276 FlyBase G51492.1 AAGAATCCTTTAAGCTTCGCTGTGCAAGAACAAAGTATCCTTAAAAACGTTTTGAAAACTATCCGGTATGTTTATT 10 15318323 0.976179382 5 9 60 0.9 0.653212514 0 0 0 10 0 1 9 3R:15318263-15318338 6 CG6276 FBtr0083123 15318201 15318439 GCTGTG 6mer2-7 dme-miR-1008-3p 3R - 15318303 15318338 3'utr CG6276 FlyBase G38902.1 AAGAATCCTTTAAGCTTCGCTGTGCAAGAACAAAGT 7 15318323 0.958332996 3 7 37 1 1 0 0.285714286 0.5 7 0 0 10 3R:15318303-15318338 6 7.5 2278 FBgn0038316 98.66666667 6.676666667 10.25333333 0.076013514 1.123315027 0.731469441 3 3 3 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 3R 15324537 15324542 + 3R_15324537_15324542_+ 0.936657914 0.976665462 0.956661688 0.028289645 ear FBtr0334695 15324283 15325279 3R + 15324504 15324562 3'utr ear FlyBase G42978.1 ATTGAAGTCGTCCTTTAGTTTTTGAGACTCATTTGTGTTAAGACTCGTTTCGTTTAAGA 203 15324526 0.738728478 16 197 2210 0.966527197 2.36361198 0.167364017 0.157635468 0.284518828 203 8 0 231 3R:15324504-15324562 6 ear FBtr0334695 15324283 15325279 TGTGTT 6mer3-8 dme-miR-317-3p 3R + 15324475 15324558 3'utr ear FlyBase G32479.1 AAGACCCAATCGATTTCGTTTTTCAAAATATTGAAGTCGTCCTTTAGTTTTTGAGACTCATTTGTGTTAAGACTCGTTTCGTTT 94 15324526 0.99162419 18 89 967 0.944444444 2.133538908 0.097222222 0.372340426 0.590277778 94 8 0 136 3R:15324475-15324558 6 137.5 2279 FBgn0026441 968.99 34.99666667 53.49 0.141900329 3.928945614 2.570573939 11 11 11 0.2 dme-miR-92b-3p 7mer-m1 TGCAATT 3R 15324580 15324586 + 3R_15324580_15324586_+ 0.734069066 0.500860993 0.617465029 0.164903029 ear FBtr0334695 15324283 15325279 3R + 15324580 15324616 3'utr ear FlyBase G42979.1 TGCAATTATACACTAACGCGACGATTTTAACGTTCTA 8 15324586 0.886065438 2 8 40 1 0.954242509 0.333333333 0.125 0.222222222 8 0 0 9 3R:15324580-15324616 6 ear FBtr0334695 15324283 15325279 TGCAATT 7mer-m1 dme-miR-92b-3p 3R + 15324583 15324627 3'utr ear FlyBase G32480.1 AATTATACACTAACGCGACGATTTTAACGTTCTACGCATTTGCTA 7 15324586 0.979053742 4 6 41 0.818181818 0.954242509 0 0.571428571 0.727272727 7 2 0 9 3R:15324583-15324627 3 7 2280 FBgn0026441 968.99 34.99666667 53.49 0.007224017 0.200019049 0.130865582 -6 -6 -6 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 15325437 15325443 - 3R_15325437_15325443_- 0.802271708 0.79790086 0.800086284 0.003090622 CG6236 FBtr0083122|FBtr0083121 15325323|15325323 15325538|15325538 3R - 15325418 15325501 3'utr CG6236 FlyBase G51496.1 GCTAAGCAATCAACTGGAATAGATTTCTGCACTGATTGTAGATTTTAGATTACTCCTTCCAAAGAATATTGTCACTGGCTCCTT 95 15325445 0.7932172 18 90 749 0.964285714 1.73239376 0.241071429 0.159574468 0.294642857 94 3 1 108 3R:15325418-15325501 7 CG6236 FBtr0083122|FBtr0083121 15325323|15325323 15325538|15325538 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 15325411 15325534 3'utr CG6236 FlyBase G38907.1 TGCACAAAATGACAAGTCCAAAACATAGAAACTGCTAAGCAATCAACTGGAATAGATTTCTGCACTGATTGTAGATTTTAGATTACTCCTTCCAAAGAATATTGTCACTGGCTCCTTAAGTTAA 68 15325445 0.987197544 19 61 526 0.913043478 1.447158031 0.119565217 0.235294118 0.434782609 68 6 2 84 3R:15325411-15325534 7 62 2281 FBgn0038318 770.0133333 38.62666667 58.75333333 0.080518086 1.605108733 1.055259276 2 2 2 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 3R 15342110 15342115 + 3R_15342110_15342115_+ 0.418823754 0.40048595 0.409654852 0.012966853 Aats-ser FBtr0334589 15342088 15343218 3R + 15342046 15342149 stop_codon Aats-ser FlyBase G43022.1 AACGGATACCGGAGACGAAGCTGGTCAAATTCATCAAGGCCTAGGCTTAACACATTCTGTACCTTTGACTGTTATCATTAAATCGTTGGGCTTATCAACGAAAG 222 15342103 0.987810636 18 216 1941 0.975 1.959041392 0.189285714 0.202702703 0.367857143 222 5 2 273 3R:15342046-15342149 6 Aats-ser FBtr0334589 15342088 15343218 TTGACT 6mer3-8 dme-miR-1012-3p 3R + 15342071 15342136 stop_codon Aats-ser FlyBase G32510.1 CAAATTCATCAAGGCCTAGGCTTAACACATTCTGTACCTTTGACTGTTATCATTAAATCGTTGGGC 127 15342103 0.985296864 9 124 1069 0.978947368 1.968482949 0.226315789 0.362204724 0.573684211 127 3 1 186 3R:15342071-15342136 6 169.5 2282 FBgn0021750 239.2133333 16.63 25.6 0.708572543 10.19242333 6.62109375 7 7 7 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 3R 15344215 15344220 - 3R_15344215_15344220_- 0.657514047 0.68357132 0.670542683 0.018425294 Surf4 FBtr0083117 15343651 15344263 3R - 15344057 15344272 stop_codon Surf4 FlyBase G51515.1 AAGTGGTAGAGGCCAGGCAACGGTCGCTCCTTGAACGAAACACTTTCAACATTTGACTTTTACCGTGTTTTACTCCTTCTGAGAAATGTTAGTTAGGAATTACCATAAAATGGGACAACAACAGGAGCAGCATCAGCAGCACAACACCGGCACGTATAAGAACTTGACAATTTTCAATAAAGGGACTTCCGCAATACCCCTCTCCAATGGCTCACT 65 15344213 0.985419434 23 62 495 0.949367089 1.875061263 0.075949367 0.184615385 0.329113924 65 4 0 75 3R:15344057-15344272 6 Surf4 FBtr0083117 15343651 15344263 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 15344165 15344236 3'utr Surf4 FlyBase G38920.1 GAAACACTTTCAACATTTGACTTTTACCGTGTTTTACTCCTTCTGAGAAATGTTAGTTAGGAATTACCATAA 34 15344214 0.987185341 6 33 289 0.98 1.69019608 0.06 0.352941176 0.56 34 1 0 49 3R:15344165-15344236 6 35.5 2283 FBgn0019925 766.2766667 57.29666667 87.82333333 0.046327915 0.619582291 0.404220594 -7 -6 -6.5 0.2 dme-bantam-3p 7mer-m8 TGATCTC 3R 15349509 15349515 + 3R_15349509_15349515_+ 0.661614406 0.66161524 0.661614823 5.66E-07 CG42726 FBtr0303074 15349502 15350391 3R + 15349468 15349553 stop_codon CG42726 FlyBase G43033.1 AAATATTGGTACCAAAAAGAAGAAAACACAAAGTGACGATATGATCTCTAATGAGTTGGCCCTTTTTCAAAGGGGTCCTCTAATTT 123 15349509 0.929379053 9 117 837 0.959459459 1.67516709 0.304054054 0.170731707 0.310810811 123 4 2 142 3R:15349468-15349553 7 CG42726 FBtr0303074 15349502 15350391 TGATCTC 7mer-m8 dme-bantam-3p 3R + 15349491 15349544 stop_codon CG42726 FlyBase G32519.2 AAACACAAAGTGACGATATGATCTCTAATGAGTTGGCCCTTTTTCAAAGGGGTC 79 15349509 0.629600397 6 74 529 0.93495935 2.06069784 0.422764228 0.405063291 0.617886179 79 8 0 115 3R:15349491-15349544 7 95.5 2284 FBgn0261679 36.5 1.936666667 2.98 2.616438356 49.31153184 32.04697987 0 0 0 0.2 dme-miR-317-5p 7mer-A1 TATCCCA 3R 15353678 15353684 + 3R_15353678_15353684_+ 0.744517798 0.821193724 0.782855761 0.054218049 CG5038 FBtr0083089 15353467 15353926 3R + 15353669 15353712 3'utr CG5038 FlyBase G43044.1 ATACATTCATATCCCATCAGCTAAAATCTCATGACACCCTAATT 38 15353690 0.791775568 6 35 232 0.926829268 1.579783597 0 0.078947368 0.146341463 38 3 0 38 3R:15353669-15353712 7 CG5038 FBtr0083089 15353467 15353926 TATCCCA 7mer-A1 dme-miR-317-5p 3R + 15353636 15353713 3'utr CG5038 FlyBase G32523.1 AATTTTAATTCCGTGCAATATTGTATCTATATCATACATTCATATCCCATCAGCTAAAATCTCATGACACCCTAATTG 30 15353690 0.771969573 8 30 195 1 1.643452676 0.022727273 0.4 0.590909091 30 0 0 44 3R:15353636-15353713 7 27.5 2285 FBgn0038324 139.0933333 6.273333333 9.646666667 0.197708972 4.383634431 2.850725639 -12 -12 -12 0.2 dme-miR-7-5p 7mer-m8 GTCTTCC 3R 15358864 15358870 + 3R_15358864_15358870_+ 0.703618893 0.698950035 0.701284464 0.003301411 CG5044 FBtr0083091|FBtr0083090 15358810|15358810 15359263|15359263 3R + 15358834 15358903 3'utr CG5044 FlyBase G43056.1 TTGTTTGAGCCTTGGCATCCAATCCTGTTTGTCTTCCGTTGAGCCGCTCATTCTTATATGCACACAACTT 33 15358872 0.988527127 8 32 296 0.941176471 1.028028724 0.029411765 0.03030303 0.058823529 33 0 2 32 3R:15358834-15358903 7 CG5044 FBtr0083091|FBtr0083090 15358810|15358810 15359263|15359263 GTCTTCC 7mer-m8 dme-miR-7-5p 3R + 15358839 15358916 3'utr CG5044 FlyBase G32535.1 TGAGCCTTGGCATCCAATCCTGTTTGTCTTCCGTTGAGCCGCTCATTCTTATATGCACACAACTTAATATCTTTGTAT 32 15358884 0.988470746 8 29 277 0.957446809 1.653212514 0.106382979 0.40625 0.595744681 32 2 0 45 3R:15358839-15358916 7 19 2286 FBgn0038326 271.75 19.3 29.30333333 0.069917203 0.984455959 0.648390399 -8 -20 -14 0.2 dme-miR-33-5p 7mer-m8 CAATGCA 3R 15359125 15359131 + 3R_15359125_15359131_+ 0.662862789 0.662226445 0.662544617 0.000450003 CG5044 FBtr0083091|FBtr0083090 15358810|15358810 15359263|15359263 3R + 15359076 15359159 3'utr CG5044 FlyBase G43059.1 CGAGGAAGAATCCTATTCGCCGGTATTTACCAATAACGATTGTGAAATTCAATGCATTTAAATATATGATATACATATATGCCT 248 15359124 0.747358497 19 239 2059 0.963934426 1.866287339 0.055737705 0.185483871 0.337704918 248 8 3 294 3R:15359076-15359159 7 CG5044 FBtr0083091|FBtr0083090 15358810|15358810 15359263|15359263 CAATGCA 7mer-m8 dme-miR-33-5p 3R + 15359076 15359147 3'utr CG5044 FlyBase G32537.1 CGAGGAAGAATCCTATTCGCCGGTATTTACCAATAACGATTGTGAAATTCAATGCATTTAAATATATGATAT 138 15359123 0.734142341 17 132 1103 0.97029703 1.593286067 0.059405941 0.333333333 0.544554455 138 2 4 196 3R:15359076-15359147 7 163 2287 FBgn0038326 271.75 19.3 29.30333333 0.599816007 8.445595855 5.56250711 1 2 1.5 0.2 dme-miR-305-3p 6mer2-7 TGTGCC 3R 15359203 15359208 + 3R_15359203_15359208_+ 0.92358124 0.724689818 0.824135529 0.140637458 CG5044 FBtr0083091|FBtr0083090 15358810|15358810 15359263|15359263 3R + 15359174 15359237 3'utr CG5044 FlyBase G43060.1 CAATTCGTAGTCCTAATACAATCAATAATTGTGCCTAAAGAATCGTTAGAATTCGTTTACCAAG 28 15359203 0.974200209 7 27 169 1 1.556302501 0.222222222 0.214285714 0.388888889 28 0 0 36 3R:15359174-15359237 6 CG5044 FBtr0083091|FBtr0083090 15358810|15358810 15359263|15359263 TGTGCC 6mer2-7 dme-miR-305-3p 3R + 15359182 15359230 3'utr CG5044 FlyBase G32538.1 AGTCCTAATACAATCAATAATTGTGCCTAAAGAATCGTTAGAATTCGTT 28 15359203 0.946681984 6 24 162 0.925 1.267171728 0.075 0.259259259 0.5 27 2 1 37 3R:15359182-15359230 6 23.5 2288 FBgn0038326 271.75 19.3 29.30333333 0.086476541 1.21761658 0.801956546 0 0 0 0.2 dme-miR-184-3p 7mer-A1 CCGTCCA 3R 15362964 15362970 - 3R_15362964_15362970_- 0.526732984 0.543101092 0.534917038 0.011573995 CG6171 FBtr0083113 15362794 15363143 3R - 15362940 15362989 3'utr CG6171 FlyBase G51546.1 ATGACAGGGATGCGGACTACCGTCCAGGCGCAGACATAAACGAAGATGAG 32 15362972 0.843204968 3 30 81 0.925 1.568201724 0.3 0.15625 0.325 32 3 0 37 3R:15362940-15362989 7 CG6171 FBtr0083113 15362794 15363143 CCGTCCA 7mer-A1 dme-miR-184-3p 3R - 15362933 15362987 3'utr CG6171 FlyBase G38945.1 GACAGGGATGCGGACTACCGTCCAGGCGCAGACATAAACGAAGATGAGGATGATG 19 15362972 0.852261304 4 19 45 1 1.447158031 0.357142857 0.368421053 0.571428571 19 0 0 28 3R:15362933-15362987 7 24.5 2289 FBgn0026737 228.3266667 29.69333333 45.44333333 0.107302403 0.825101033 0.539132986 2 2 2 0.2 dme-bantam-3p 6mer3-8 TGATCT 3R 15417160 15417165 + 3R_15417160_15417165_+ 0.955463236 0.961888193 0.958675714 0.004543161 Atx2 FBtr0083100|FBtr0344377 15415551|15415551 15417277|15417277 3R + 15417099 15417188 3'utr Atx2 FlyBase G43090.1 TAACAAGAACAATCCGTATTACTTCTTTGCCCGTCATAAATCGGTTTGGTTATATTTCGTATGATCTAGAAGCATCTGTTGTGGTCTGTT 216 15417160 0.989513633 9 213 2063 0.987654321 2.380211242 0.432098765 0.111111111 0.209876543 216 3 0 240 3R:15417099-15417188 6 Atx2 FBtr0083100|FBtr0344377 15415551|15415551 15417277|15417277 TGATCT 6mer3-8 dme-bantam-3p 3R + 15417123 15417188 3'utr Atx2 FlyBase G32559.1 CTTTGCCCGTCATAAATCGGTTTGGTTATATTTCGTATGATCTAGAAGCATCTGTTGTGGTCTGTT 100 15417160 0.919584414 7 95 910 0.952662722 2.206825876 0.455621302 0.46 0.680473373 100 8 0 161 3R:15417123-15417188 6 154.5 2290 FBgn0041188 1154.45 29.14333333 44.74333333 0.133829962 5.301383964 3.453028384 0 0 0 0.2 dme-miR-34-5p 8mer-A1 CACTGCCA 3R 15442401 15442408 - 3R_15442401_15442408_- 0.676389059 0.674483138 0.675436098 0.001347746 AdamTS-A FBtr0334629|FBtr0339398|FBtr0083160 15442244|15442244|15442244 15443238|15443238|15443238 3R - 15442350 15442423 3'utr AdamTS-A FlyBase G51563.1 TTGATTGATTGTTATCACTGCCAGATTTTCAACGTTCAATCGATTGTATCCCAAATCGCCTAAGTCCCGGTACC 62 15442410 0.748186109 15 55 491 0.884057971 1.183269844 0.536231884 0.112903226 0.202898551 62 5 3 61 3R:15442350-15442423 8 AdamTS-A FBtr0083160|FBtr0339398|FBtr0334629 15442244|15442244|15442244 15443238|15443238|15443238 CACTGCCA 8mer-A1 dme-miR-34-5p 3R - 15442277 15442427 3'utr AdamTS-A FlyBase G38954.1 ACTCTTGATTGATTGTTATCACTGCCAGATTTTCAACGTTCAATCGATTGTATCCCAAATCGCCTAAGTCCCGGTACCAAGTATCCTCGCTGTATTTTCATTTAACTAGCTAGGCTAATGCAAAACCAATGTTAACAATTAATTTAATGTC 64 15442409 0.985814981 23 59 493 0.94 1.672097858 0.43 0.34375 0.58 64 5 1 94 3R:15442277-15442427 8 45 2291 FBgn0038341 333.3333333 5.796666667 8.936666667 0.135 7.763082231 5.035434539 2 1 1.5 0.2 dme-miR-1003-3p 7mer-m8 ATGTGAG 3R 15442900 15442906 - 3R_15442900_15442906_- 0.585438926 0.67084335 0.628141138 0.06039003 AdamTS-A FBtr0334629|FBtr0339398|FBtr0083160 15442244|15442244|15442244 15443238|15443238|15443238 3R - 15442807 15442959 3'utr AdamTS-A FlyBase G51566.1 AGTAACTAGATATTATTGCCATGTAATGTATTAAGTATTGTAAATACTAGAGGATGTGAGCCTTTGAATTAGCAAATAGGGATTATCCATCATCATAGGTCGTCGCTCAGATAAGCCCGTATTTGTGCCAACTCCGGTATGCAGTGATGGAAG 31 15442903 0.97447262 19 31 225 1 1.544068044 0.142857143 0.096774194 0.2 31 0 0 35 3R:15442807-15442959 7 AdamTS-A FBtr0083160|FBtr0339398|FBtr0334629 15442244|15442244|15442244 15443238|15443238|15443238 ATGTGAG 7mer-m8 dme-miR-1003-3p 3R - 15442877 15442957 3'utr AdamTS-A FlyBase G38958.1 TAACTAGATATTATTGCCATGTAATGTATTAAGTATTGTAAATACTAGAGGATGTGAGCCTTTGAATTAGCAAATAGGGAT 19 15442903 0.962982093 8 17 136 0.904761905 0.977723605 0 0.105263158 0.19047619 19 1 1 19 3R:15442877-15442957 7 15 2292 FBgn0038341 333.3333333 5.796666667 8.936666667 0.045 2.587694077 1.67847818 -3 -3 -3 0.2 dme-miR-282-5p 6mer2-7 GAGGCT 3R 15493037 15493042 + 3R_15493037_15493042_+ 0.983369984 0.817896903 0.900633443 0.117007151 CG5205 FBtr0083147 15492984 15493310 3R + 15493003 15493063 3'utr CG5205 FlyBase G43107.1 AAATCTAAAGTGTACCGTAGCATTCTGTAGAGTTGAGGCTTAACTTTTAGTTAATGGAGTT 15 15493036 0.968047578 8 15 112 1 1.255272505 0 0.2 0.333333333 15 0 0 18 3R:15493003-15493063 6 CG5205 FBtr0083147 15492984 15493310 GAGGCT 6mer2-7 dme-miR-282-5p 3R + 15493003 15493057 3'utr CG5205 FlyBase G32565.1 AAATCTAAAGTGTACCGTAGCATTCTGTAGAGTTGAGGCTTAACTTTTAGTTAAT 23 15493036 0.836384674 6 23 197 1 1.602059991 0 0.434782609 0.675 23 0 0 40 3R:15493003-15493057 6 16 2293 FBgn0038344 937.8966667 16.18666667 24.77666667 0.017059449 0.988467875 0.645768869 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 15493142 15493147 + 3R_15493142_15493147_+ 0.999957803 0.999997336 0.99997757 2.79E-05 CG5205 FBtr0083147|FBtr0083147|FBtr0083147 15492984|15492984|15492984 15493310|15493310|15493310 3R + 15493130 15493161 3'utr CG5205 FlyBase G43108.1 GCGTATTTATTGTGTGATCCTCCAAGACATGT 11 15493141 0.915054294 4 9 103 0.857142857 0.602059991 0.142857143 0.181818182 0.357142857 11 0 2 12 3R:15493130-15493161 6 CG5205 FBtr0083147|FBtr0083147|FBtr0083147 15492984|15492984|15492984 15493310|15493310|15493310 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 15493121 15493159 3'utr CG5205 FlyBase G32566.1 ACTGAACTTGCGTATTTATTGTGTGATCCTCCAAGACAT 11 15493142 0.971903474 5 10 94 0.944444444 1.230448921 0.166666667 0.454545455 0.666666667 11 1 0 17 3R:15493121-15493159 6 10.5 2294 FBgn0038344 937.8966667 16.18666667 24.77666667 0.011195263 0.648682043 0.42378582 1 0 0.5 0.2 dme-bantam-3p 6mer2-7 GATCTC 3R 15798839 15798844 + 3R_15798839_15798844_+ 0.542000223 0.831554367 0.686777295 0.204745738 nsl1 FBtr0301732 15798480 15801925 3R + 15798807 15798860 stop_codon nsl1 FlyBase G43141.1 CGACAACGCCACCACAGTCCCTCCTCAACCTCGATCTCGGCACTGAGCGGCGCT 15 15798837 0.982812053 2 10 77 0.611111111 1.041392685 0.222222222 0.133333333 0.277777778 15 7 0 11 3R:15798807-15798860 6 nsl1 FBtr0301732 15798480 15801925 GATCTC 6mer2-7 dme-bantam-3p 3R + 15798807 15798855 3'utr nsl1 FlyBase G32593.1 CGACAACGCCACCACAGTCCCTCCTCAACCTCGATCTCGGCACTGAGCG 11 15798837 0.96037655 3 10 49 0.944444444 1.230448921 0.444444444 0.454545455 0.666666667 11 1 0 17 3R:15798807-15798855 6 12 2295 FBgn0262527 2734.32 54.57333333 83.61333333 0.00438866 0.219887613 0.14351778 2 2 2 0.2 dme-miR-79-3p 7mer-A1 AGCTTTA 3R 15800876 15800882 + 3R_15800876_15800882_+ 0.440143344 0.474811691 0.457477517 0.024514261 nsl1 FBtr0309860|FBtr0301732|FBtr0309859 15798861|15798480|15798861 15801925|15801925|15801220 3R + 15800849 15800899 3'utr nsl1 FlyBase G43149.1 AGCCGTCGACACCAGATGTCGAGCATGAGCTTTACGACTCGGCGATCGATG 10 15800874 0.954359407 5 10 47 1 1.079181246 0.333333333 0.2 0.333333333 10 0 0 12 3R:15800849-15800899 7 nsl1 FBtr0309859|FBtr0309860|FBtr0301732 15798861|15798861|15798480 15801220|15801925|15801925 AGCTTTA 7mer-A1 dme-miR-79-3p 3R + 15800851 15800893 3'utr nsl1 FlyBase G32598.1 CCGTCGACACCAGATGTCGAGCATGAGCTTTACGACTCGGCGA 8 15800879 0.741676947 3 8 32 1 1 0.4 0.25 0.4 8 0 0 10 3R:15800851-15800893 7 7.5 2296 FBgn0262527 2734.32 54.57333333 83.61333333 0.002742912 0.137429758 0.089698613 2 -3 -0.5 0.2 dme-miR-14-3p 6mer3-8 AAGACT 3R 15801049 15801054 + 3R_15801049_15801054_+ 0.784951898 0.556177597 0.670564748 0.161767859 nsl1 FBtr0309860|FBtr0301732|FBtr0301726|FBtr0334592|FBtr0309863|FBtr0309862|FBtr0301727|FBtr0309859|FBtr0309861|FBtr0301731|FBtr0301728|FBtr0301730 15798861|15798480|15801020|15801020|15801020|15801020|15801020|15798861|15801020|15801020|15801020|15801020 15801925|15801925|15801220|15802102|15801925|15801220|15801925|15801220|15801220|15801925|15801925|15801925 3R + 15801037 15801061 3'utr nsl1 FlyBase G43150.1 TTTTCGTTATTTAAGACTTTTAAAC 10 15801056 0.740047979 4 10 84 1 1.113943352 0 0.2 0.384615385 10 0 0 13 3R:15801037-15801061 6 nsl1 FBtr0301730|FBtr0309863|FBtr0309859|FBtr0309862|FBtr0309861|FBtr0301727|FBtr0301728|FBtr0301731|FBtr0309860|FBtr0301732|FBtr0301726|FBtr0334592 15801020|15801020|15798861|15801020|15801020|15801020|15801020|15801020|15798861|15798480|15801020|15801020 15801925|15801925|15801220|15801220|15801220|15801925|15801925|15801925|15801925|15801925|15801220|15802102 AAGACT 6mer3-8 dme-miR-14-3p 3R + 15801004 15801072 stop_codon nsl1 FlyBase G32599.1 CGCAGCAGACGCATCTAAGACCAAAATCCAAAGTTTTCGTTATTTAAGACTTTTAAACGATTTGTCAAT 14 15801056 0.984066557 4 14 110 1 1.342422681 0.181818182 0.357142857 0.590909091 14 0 0 22 3R:15801004-15801072 6 10.5 2297 FBgn0262527 2734.32 54.57333333 83.61333333 0.003840077 0.192401661 0.125578058 -7 -7 -7 0.2 dme-miR-14-3p 7mer-A1 AGACTGA 3R 15823606 15823612 + 3R_15823606_15823612_+ 0.821887101 0.822838864 0.822362982 0.000673024 alpha-Man-IIb FBtr0083179|FBtr0345238|FBtr0334593 15822936|15822936|15822936 15824118|15824118|15824118 3R + 15823585 15823628 3'utr alpha-Man-IIb FlyBase G43158.1 AGCGTTCGCATCGATTTGTTTAGACTGATTAGCCTAAAACGATT 68 15823604 0.730388281 8 68 633 1 1.86332286 0.150684932 0.073529412 0.136986301 68 0 0 73 3R:15823585-15823628 7 alpha-Man-IIb FBtr0334593|FBtr0345238|FBtr0083179 15822936|15822936|15822936 15824118|15824118|15824118 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 15823585 15823626 3'utr alpha-Man-IIb FlyBase G32605.1 AGCGTTCGCATCGATTTGTTTAGACTGATTAGCCTAAAACGA 43 15823604 0.707266663 6 42 397 0.986111111 1.851258349 0.236111111 0.372093023 0.625 43 1 0 71 3R:15823585-15823626 7 55.5 2298 FBgn0026616 98.7 2.216666667 3.413333333 0.56231003 25.03759398 16.25976563 2 2 2 0.2 dme-bantam-3p 7mer-m8 TGATCTC 3R 15844299 15844305 + 3R_15844299_15844305_+ 0.644120419 0.661374636 0.652747527 0.012200562 spn-E FBtr0083183 15844105 15844415 3R + 15844281 15844330 3'utr spn-E FlyBase G43165.1 TTTCTATGTTATGTTGAATGATCTCTCTTCGTTCAATTACGAAGTGTAAA 23 15844299 0.823496831 4 22 270 0.961538462 1.397940009 0.153846154 0.130434783 0.230769231 23 1 0 25 3R:15844281-15844330 7 spn-E FBtr0083183 15844105 15844415 TGATCTC 7mer-m8 dme-bantam-3p 3R + 15844286 15844332 3'utr spn-E FlyBase G32609.1 ATGTTATGTTGAATGATCTCTCTTCGTTCAATTACGAAGTGTAAAAT 21 15844298 0.747508333 6 19 227 0.964285714 1.130333768 0.178571429 0.333333333 0.5 21 0 1 27 3R:15844286-15844332 7 21.5 2299 FBgn0003483 512.23 13.13666667 20.07333333 0.041973332 1.636640447 1.071072733 0 1 0.5 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3R 15854046 15854052 - 3R_15854046_15854052_- 0.404468856 0.442155951 0.423312403 0.026648804 Hmt-1 FBtr0083188 15853866 15854095 3R - 15853964 15854083 3'utr Hmt-1 FlyBase G51626.1 TACAGAGTAGTTTCTGATATTCCTGATTCCATGTGATTTGTGGTGTATTGTTATACGTATGAGAGCAGCTCGTCAAAGTCTTAGTTCGTCTATAAGTAACCTTATATGCTACTCTTATAC 111 15854046 0.990448997 15 109 1111 0.986013986 1.672097858 0.111888112 0.207207207 0.384615385 111 0 2 141 3R:15853964-15854083 7 Hmt-1 FBtr0083188 15853866 15854095 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 15853988 15854085 3'utr Hmt-1 FlyBase G39001.1 CATACAGAGTAGTTTCTGATATTCCTGATTCCATGTGATTTGTGGTGTATTGTTATACGTATGAGAGCAGCTCGTCAAAGTCTTAGTTCGTCTATAAG 82 15854046 0.989547903 14 81 786 0.992307692 2.11058971 0.161538462 0.402439024 0.623076923 82 1 0 129 3R:15853988-15854085 7 85.5 2300 FBgn0038376 648.03 26.12666667 39.84666667 0.131938336 3.2725185 2.14572528 -6 -6 -6 0.2 dme-miR-304-5p 7mer-m8 TGAGATT 3R 15962371 15962377 - 3R_15962371_15962377_- 0.620192999 0.619655362 0.619924181 0.000380141 CG4287 FBtr0083240|FBtr0301716 15962165|15962165 15962537|15962537 3R - 15962350 15962394 3'utr CG4287 FlyBase G51636.1 AAATATGGGGACACCTATGAGATTTACAGATTTTAGTCAATTGCA 22 15962377 0.747213711 4 21 147 0.964285714 1.431363764 0.25 0.227272727 0.392857143 22 1 0 27 3R:15962350-15962394 7 CG4287 FBtr0083240|FBtr0301716 15962165|15962165 15962537|15962537 TGAGATT 7mer-m8 dme-miR-304-5p 3R - 15962349 15962390 3'utr CG4287 FlyBase G39008.1 ATGGGGACACCTATGAGATTTACAGATTTTAGTCAATTGCAA 9 15962377 0.812112578 4 9 59 1 1.176091259 0.4 0.333333333 0.6 9 0 0 15 3R:15962349-15962390 7 15.5 2301 FBgn0038388 224 16.66 25.57666667 0.069196429 0.930372149 0.606021113 0 0 0 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 3R 15962460 15962465 - 3R_15962460_15962465_- 0.548458334 0.61423919 0.581348762 0.04651412 CG4287 FBtr0083240|FBtr0301716 15962165|15962165 15962537|15962537 3R - 15962442 15962481 3'utr CG4287 FlyBase G51637.1 GAAAAATCATTGAAATTGTGTTACTAGCCGTAAGCAAAGC 89 15962466 0.754509994 6 81 707 0.900990099 1.356981401 0.059405941 0.078651685 0.188118812 89 7 3 91 3R:15962442-15962481 6 CG4287 FBtr0083240|FBtr0301716 15962165|15962165 15962537|15962537 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 15962440 15962478 3'utr CG4287 FlyBase G39010.1 AAATCATTGAAATTGTGTTACTAGCCGTAAGCAAAGCGA 49 15962466 0.74753803 6 45 386 0.945945946 1.367976785 0.040540541 0.367346939 0.581081081 49 2 2 70 3R:15962440-15962478 6 69 2302 FBgn0038388 224 16.66 25.57666667 0.308035714 4.141656663 2.697771406 1 1 1 0.2 dme-miR-276a-3p 6mer2-7 GTTCCT 3R 15983389 15983394 + 3R_15983389_15983394_+ 0.983701899 0.978318493 0.981010196 0.003806639 Hel89B FBtr0344471|FBtr0301715 15983324|15983324 15983451|15983451 3R + 15983359 15983431 3'utr Hel89B FlyBase G43231.1 AGGCTACGTTGATCATTTATATTGCCCTCTGTTCCTTTATAATCGCGAAAAGAAACTTTTAGAAATAAATATT 28 15983397 0.982343886 9 28 210 1 1.51851394 0.212121212 0.142857143 0.272727273 28 0 0 33 3R:15983359-15983431 6 Hel89B FBtr0344471|FBtr0301715 15983324|15983324 15983451|15983451 GTTCCT 6mer2-7 dme-miR-276a-3p 3R + 15983348 15983428 3'utr Hel89B FlyBase G32657.1 CTTCCAGTTTTAGGCTACGTTGATCATTTATATTGCCCTCTGTTCCTTTATAATCGCGAAAAGAAACTTTTAGAAATAAAT 25 15983398 0.914708736 10 22 204 0.914285714 1.204119983 0.342857143 0.32 0.514285714 25 2 1 32 3R:15983348-15983428 6 17 2303 FBgn0022787 1806.236667 33.54666667 51.41 0.009411834 0.506756757 0.330674966 -8 -9 -8.5 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 16003563 16003569 + 3R_16003563_16003569_+ 0.464295043 0.489507868 0.476901455 0.017828213 srp FBtr0335424 16003135 16004081 3R + 16003393 16003610 stop_codon srp FlyBase G43262.1 CAGCTGCAGCAGCAGACTGCCGCCCTCTTGGGTCAACATGAGCAGCATGTGACCAACTATGCGATGCATAAGTTCGGCGTTGACCGGGAAACAGTGGTGAAGATGGAGTAGGCGCGACACGCTGTATGTCGCACGACCAAAGATTCTGTTGTTACATTAATCTCATAGCTCCAAAGAATTTATAGCCTGTATACCAAGAGCAGTTCTCAAAGAACACT 531 16003549 0.855615541 36 497 3843 0.937791602 2.002166062 0.077760498 0.175141243 0.31881804 531 35 5 603 3R:16003393-16003610 7 srp FBtr0335424 16003135 16004081 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 16003379 16003671 stop_codon srp FlyBase G32683.2 AGCAGCAGCAGCAACAGCTGCAGCAGCAGACTGCCGCCCTCTTGGGTCAACATGAGCAGCATGTGACCAACTATGCGATGCATAAGTTCGGCGTTGACCGGGAAACAGTGGTGAAGATGGAGTAGGCGCGACACGCTGTATGTCGCACGACCAAAGATTCTGTTGTTACATTAATCTCATAGCTCCAAAGAATTTATAGCCTGTATACCAAGAGCAGTTCTCAAAGAACACTCATCTATCTAAAATCTATCGAATCATTAGTTGTACATACGGTCTAAATCGATTGATACTTA 337 16003549 0.9723129 41 313 2355 0.94 1.769007871 0.12 0.367952522 0.574 337 23 7 470 3R:16003379-16003671 7 262.5 2304 FBgn0003507 2528.6 69.84666667 106.7833333 0.103812386 3.758232318 2.45824879 14 14 14 0.2 dme-miR-92b-3p 7mer-m1 TGCAATT 3R 16003938 16003944 + 3R_16003938_16003944_+ 0.762774478 0.765586661 0.764180569 0.001988526 srp FBtr0335424 16003135 16004081 3R + 16003614 16003963 3'utr srp FlyBase G43262.2 CTATCTAAAATCTATCGAATCATTAGTTGTACATACGGTCTAAATCGATTGATACTTACATTTTCGTCGAATTTTAATGGTCCACTACTCGAAATTTGTTATGAAATACTAGTTTAATTGTTAGCAAAATGCCAACAGCATAAAATCGATTCAGAAACTAGGCTAAGAATGTTCATTTAAAATTTTGTTATCAAATCGAATACCTTTTGAGATTTCCTACAATCAAATTCCACTTAGATATTAGCCACAAATCATAGTTAAGTCAACCAAAAAAAGGCAAATGAAAACGAAAAAGAATAACAATCGAAGTAACCAATAATCTCATGCAATTAGCTATTAATTTATATATT 365 16003930 0.999999402 54 346 2252 0.966442953 2.033423755 0.089485459 0.175342466 0.326621924 365 12 3 432 3R:16003614-16003963 7 srp FBtr0335424 16003135 16004081 TGCAATT 7mer-m1 dme-miR-92b-3p 3R + 16003715 16003963 3'utr srp FlyBase G32683.4 TGAAATACTAGTTTAATTGTTAGCAAAATGCCAACAGCATAAAATCGATTCAGAAACTAGGCTAAGAATGTTCATTTAAAATTTTGTTATCAAATCGAATACCTTTTGAGATTTCCTACAATCAAATTCCACTTAGATATTAGCCACAAATCATAGTTAAGTCAACCAAAAAAAGGCAAATGAAAACGAAAAAGAATAACAATCGAAGTAACCAATAATCTCATGCAATTAGCTATTAATTTATATATT 285 16003938 0.975782655 30 275 1584 0.964370546 2.608526034 0.087885986 0.343859649 0.555819477 285 15 0 406 3R:16003715-16003963 7 216.5 2305 FBgn0003507 2528.6 69.84666667 106.7833333 0.085620501 3.099646845 2.027469955 8 0 4 0.2 dme-miR-278-3p 6mer3-8 CCCACC 3R 16040803 16040808 + 3R_16040803_16040808_+ 0.992597507 0.998904189 0.995750848 0.00445951 pnr FBtr0083220|FBtr0335426|FBtr0083221|FBtr0335427 16040311|16040311|16040311|16040311 16040915|16041796|16040915|16041796 3R + 16040776 16040917 3'utr pnr FlyBase G43285.1 AAATATTTTATGAGTATTCCGCACTTCCCCACCAACCCACTTAATAGAACATTTAGCAGTTAGTCCTATGTAGAAGTCTAGAATTAATATCGTAGCTCTGATCCATTTAATATGAACGCTAAATAAAGATTGTATTAAACTA 63 16040800 0.815148863 20 59 420 0.93902439 1.187520721 0.036585366 0.238095238 0.414634146 63 1 4 77 3R:16040776-16040917 6 pnr FBtr0083221|FBtr0335427|FBtr0083220|FBtr0335426 16040311|16040311|16040311|16040311 16040915|16041796|16040915|16041796 CCCACC 6mer3-8 dme-miR-278-3p 3R + 16040780 16040916 3'utr pnr FlyBase G32705.1 ATTTTATGAGTATTCCGCACTTCCCCACCAACCCACTTAATAGAACATTTAGCAGTTAGTCCTATGTAGAAGTCTAGAATTAATATCGTAGCTCTGATCCATTTAATATGAACGCTAAATAAAGATTGTATTAAACT 58 16040800 0.772440948 24 51 373 0.870588235 1.86923172 0.094117647 0.344827586 0.552941176 58 11 0 74 3R:16040780-16040916 6 17.5 2306 FBgn0003117 3353.65 145.2033333 222.1433333 0.005218195 0.120520649 0.078777966 3 3 3 0.2 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 16046449 16046456 - 3R_16046449_16046456_- 0.615139741 0.608451842 0.611795792 0.004729059 ird5 FBtr0304804 16046345 16046579 3R - 16046408 16046484 3'utr ird5 FlyBase G51670.1 TTTGTTATTGCCCGCTTATCCAATTAATTAGCTTTATTAGTTTCATAGAATCTTTAATGTTCTCATTTGGAAACGTT 228 16046457 0.836164252 14 219 2868 0.964143426 2.383815366 0.067729084 0.087719298 0.171314741 228 9 0 242 3R:16046408-16046484 8 ird5 FBtr0304804 16046345 16046579 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R - 16046410 16046471 3'utr ird5 FlyBase G39032.1 GCTTATCCAATTAATTAGCTTTATTAGTTTCATAGAATCTTTAATGTTCTCATTTGGAAACG 141 16046457 0.8355184 10 136 1738 0.954545455 2.276461804 0.060606061 0.290780142 0.494949495 141 9 0 189 3R:16046410-16046471 8 164 2307 FBgn0024222 780.2833333 38.32666667 59.02333333 0.210180063 4.279005044 2.778562151 1 1 1 0.2 dme-miR-304-5p 8mer-A1 TGAGATTA 3R 16060192 16060199 + 3R_16060192_16060199_+ 0.55889906 0.589105946 0.574002503 0.021359433 msps FBtr0301479|FBtr0304803|FBtr0304802|FBtr0301480|FBtr0304801 16059818|16059818|16059818|16059818|16059818 16060675|16060675|16060675|16060675|16060675 3R + 16060162 16060255 3'utr msps FlyBase G43320.1 TGCGATTCAATAAGATTCGATTGGCTGAGTTGAGATTAAAGTGGCGACTGTGACTGAGACCGGGTTCCATTAGACAGCTTGTTAGTTTATGCCT 70 16060191 0.974911574 11 69 456 0.988372093 1.929418926 0.255813953 0.171428571 0.325581395 70 1 0 85 3R:16060162-16060255 8 msps FBtr0304803|FBtr0304802|FBtr0301480|FBtr0304801|FBtr0301479 16059818|16059818|16059818|16059818|16059818 16060675|16060675|16060675|16060675|16060675 TGAGATTA 8mer-A1 dme-miR-304-5p 3R + 16060152 16060256 3'utr msps FlyBase G32731.2 GTGTTTCGTATGCGATTCAATAAGATTCGATTGGCTGAGTTGAGATTAAAGTGGCGACTGTGACTGAGACCGGGTTCCATTAGACAGCTTGTTAGTTTATGCCTA 56 16060191 0.980019838 12 54 360 0.952941176 1.908485019 0.2 0.303571429 0.541176471 56 4 0 81 3R:16060152-16060256 8 34.5 2308 FBgn0027948 3925.543333 64.62 99.02333333 0.008788592 0.533890436 0.348402733 1 1 1 0.2 dme-miR-932-5p 7mer-A1 GAATTGA 3R 16103308 16103314 + 3R_16103308_16103314_+ 0.635003758 0.732372495 0.683688126 0.068850068 Akt1 FBtr0344717|FBtr0083228|FBtr0083226|FBtr0344470|FBtr0083227 16103113|16103113|16103113|16103113|16103113 16105670|16104515|16104515|16104515|16104515 3R + 16103240 16103330 3'utr Akt1 FlyBase G43341.1 ATACCATGATAACGAAGGCAAGCAAAGGGTTTTCTTGCTAGTTTATATACACCAATAATAAGAGAATTGAATTGATAGTAACTTATTTTTG 21 16103306 0.986393958 7 18 153 0.884615385 1.361727836 0.230769231 0.238095238 0.384615385 21 3 0 23 3R:16103240-16103330 7 Akt1 FBtr0083227|FBtr0344717|FBtr0083228|FBtr0083226|FBtr0344470 16103113|16103113|16103113|16103113|16103113 16104515|16105670|16104515|16104515|16104515 GAATTGA 7mer-A1 dme-miR-932-5p 3R + 16103284 16103328 3'utr Akt1 FlyBase G32751.1 ATATACACCAATAATAAGAGAATTGAATTGATAGTAACTTATTTT 16 16103306 0.984172648 5 14 113 0.869565217 1.301029996 0.130434783 0.3125 0.52173913 16 3 0 20 3R:16103284-16103328 7 15.5 2309 FBgn0010379 3175.29 102.15 156.83 0.004881444 0.151737641 0.098833131 2 2 2 0.2 dme-miR-1008-3p 6mer2-7 GCTGTG 3R 16103826 16103831 + 3R_16103826_16103831_+ 0.496696442 0.49441867 0.495557556 0.001610577 Akt1 FBtr0344717|FBtr0083228|FBtr0083226|FBtr0344470|FBtr0083227 16103113|16103113|16103113|16103113|16103113 16105670|16104515|16104515|16104515|16104515 3R + 16103792 16103846 3'utr Akt1 FlyBase G43344.1 AAGTTATATATAATGTTAAAATTGCCTCTAATGTGCTGTGCTTTATGCAAAACTA 23 16103823 0.988760011 5 23 222 1 1.414973348 0.076923077 0.130434783 0.230769231 23 0 0 26 3R:16103792-16103846 6 Akt1 FBtr0083227|FBtr0344717|FBtr0083228|FBtr0083226|FBtr0344470 16103113|16103113|16103113|16103113|16103113 16104515|16105670|16104515|16104515|16104515 GCTGTG 6mer2-7 dme-miR-1008-3p 3R + 16103810 16103846 3'utr Akt1 FlyBase G32753.1 AAATTGCCTCTAATGTGCTGTGCTTTATGCAAAACTA 18 16103823 0.770886143 4 15 151 0.807692308 1.021189299 0.115384615 0.444444444 0.615384615 18 4 1 21 3R:16103810-16103846 6 19 2310 FBgn0010379 3175.29 102.15 156.83 0.005983705 0.186000979 0.12115029 3 3 3 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 16149241 16149247 + 3R_16149241_16149247_+ 0.6597407 0.660892607 0.660316653 0.000814516 CG5916 FBtr0083251|FBtr0344009 16148765|16148765 16149389|16149636 3R + 16149221 16149273 3'utr CG5916 FlyBase G43359.1 TTACCCAACAACAAACATTTTGTGTTCTAAGTTATCTTGTTGATCAAAGAAGT 17 16149240 0.707334732 4 17 149 1 1.342422681 0.136363636 0.176470588 0.363636364 17 0 0 22 3R:16149221-16149273 7 CG5916 FBtr0083251|FBtr0344009 16148765|16148765 16149389|16149636 TGTGTTC 7mer-m8 dme-miR-317-3p 3R + 16149222 16149282 3'utr CG5916 FlyBase G32761.1 TACCCAACAACAAACATTTTGTGTTCTAAGTTATCTTGTTGATCAAAGAAGTATTTATTTT 17 16149240 0.98841743 6 16 152 0.96 1.380211242 0.48 0.352941176 0.56 17 1 0 24 3R:16149222-16149282 7 13.5 2311 FBgn0038401 127.6666667 7.303333333 11.36 0.105744125 1.848471018 1.188380282 1 1 1 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3R 16197053 16197059 + 3R_16197053_16197059_+ 0.521141445 0.508105607 0.514623526 0.009217703 sra FBtr0344473|FBtr0083255 16196914|16196914 16197584|16197584 3R + 16196927 16197076 3'utr sra FlyBase G43368.1 TGACGAAACTAAAGCTGAAAACCTGAGTTGTAAAACCAAACGATCGGGACAACGGGTTGGGACTCATGCTCTGCGGATGGTTGGGGCTTCGATTGAGTATTTTTTGTAAATATTTTCCGATTCAATTGTGATTAATTTACACATACATAT 91 16197052 0.822085075 21 87 770 0.964285714 1.431363764 0.026785714 0.208791209 0.357142857 91 1 3 108 3R:16196927-16197076 7 sra FBtr0344473|FBtr0083255 16196914|16196914 16197584|16197584 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 16196927 16197073 3'utr sra FlyBase G32768.1 TGACGAAACTAAAGCTGAAAACCTGAGTTGTAAAACCAAACGATCGGGACAACGGGTTGGGACTCATGCTCTGCGGATGGTTGGGGCTTCGATTGAGTATTTTTTGTAAATATTTTCCGATTCAATTGTGATTAATTTACACATACA 48 16197052 0.987946693 15 47 421 0.971428571 1.832508913 0.028571429 0.375 0.571428571 48 2 0 68 3R:16196927-16197073 7 54 2312 FBgn0086370 863.5966667 56.39333333 86.18 0.06252919 0.957559995 0.626595498 1 1 1 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 16197550 16197555 + 3R_16197550_16197555_+ 0.996346221 0.99376055 0.995053385 0.001828366 sra FBtr0344473|FBtr0083255 16196914|16196914 16197584|16197584 3R + 16197520 16197566 3'utr sra FlyBase G43370.1 TTCAAATTCGAAATGAATGTTCTCAAATGTACCAAACAAAACAAAAT 26 16197537 0.967535914 3 25 142 1 1.51851394 0.363636364 0.24 0.424242424 25 0 0 33 3R:16197520-16197566 6 sra FBtr0344473|FBtr0083255 16196914|16196914 16197584|16197584 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 16197483 16197567 3'utr sra FlyBase G32770.1 ATGCCTACGTGTAGTTAAAATTTAAATTGAAAATATATTCAAATTCGAAATGAATGTTCTCAAATGTACCAAACAAAACAAAATG 23 16197537 0.968053673 7 22 129 1 1.544068044 0.428571429 0.454545455 0.657142857 22 0 0 35 3R:16197483-16197567 6 12 2313 FBgn0086370 863.5966667 56.39333333 86.18 0.013895376 0.21279111 0.139243444 13 13 13 0.2 dme-miR-1003-3p 7mer-m8 ATGTGAG 3R 16261385 16261391 - 3R_16261385_16261391_- 0.671796207 0.67178759 0.671791899 6.08E-06 bor FBtr0305998|FBtr0083276 16261353|16261353 16261833|16261833 3R - 16261380 16261442 3'utr bor FlyBase G51707.1 AACTTCTCGCTGGCTCTTCCACCAATTTCACTTGTCCGCAGTGTTTCCTATATGTGAGTATGA 9 16261392 0.991699553 7 8 82 0.8125 1.113943352 0 0.333333333 0.625 9 3 0 13 3R:16261380-16261442 7 bor FBtr0305998|FBtr0083276 16261353|16261353 16261833|16261833 ATGTGAG 7mer-m8 dme-miR-1003-3p 3R - 16261376 16261413 3'utr bor FlyBase G39057.1 ACTTGTCCGCAGTGTTTCCTATATGTGAGTATGAAGTA 7 16261394 0.63094883 5 6 58 1 0.954242509 0.333333333 0.285714286 0.444444444 7 0 0 9 3R:16261376-16261413 7 6 2314 FBgn0040237 972.07 49.02666667 75.33333333 0.006172395 0.122382377 0.079646018 1 3 2 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 16261629 16261635 - 3R_16261629_16261635_- 0.602368935 0.633074657 0.617721796 0.021712279 bor FBtr0305998|FBtr0083276 16261353|16261353 16261833|16261833 3R - 16261599 16261653 3'utr bor FlyBase G51710.1 TAATCGTTGGCGGGAAGATGTGTTCGTCTATAGATACAATTAAGTTTGACCCACA 17 16261635 0.981362043 6 17 122 1 1.255272505 0.222222222 0.058823529 0.111111111 17 0 0 18 3R:16261599-16261653 7 bor FBtr0305998|FBtr0083276 16261353|16261353 16261833|16261833 TGTGTTC 7mer-m8 dme-miR-317-3p 3R - 16261614 16261657 3'utr bor FlyBase G39060.1 TACATAATCGTTGGCGGGAAGATGTGTTCGTCTATAGATACAAT 17 16261635 0.875882511 3 16 126 0.961538462 1.397940009 0.461538462 0.411764706 0.615384615 17 1 0 25 3R:16261614-16261657 7 16 2315 FBgn0040237 972.07 49.02666667 75.33333333 0.01645972 0.326353005 0.212389381 0 0 0 0.2 dme-bantam-3p 6mer3-8 TGATCT 3R 16266854 16266859 + 3R_16266854_16266859_+ 0.9144766 0.70928506 0.81188083 0.145092301 asun FBtr0083259 16266545 16266891 3R + 16266834 16266866 3'utr asun FlyBase G43394.1 TTTTTTTTAACTTGTGATTGTGATCTTTGGCAC 9 16266852 0.653972491 3 7 100 0.8 0.602059991 0.3 0.111111111 0.2 9 1 1 8 3R:16266834-16266866 6 asun FBtr0083259 16266545 16266891 TGATCT 6mer3-8 dme-bantam-3p 3R + 16266838 16266870 3'utr asun FlyBase G32785.1 TTTTAACTTGTGATTGTGATCTTTGGCACGGTA 6 16266853 0.67946575 4 6 59 1 0.903089987 0.25 0.333333333 0.5 6 0 0 8 3R:16266838-16266870 6 7.5 2316 FBgn0020407 250 12.17666667 18.69333333 0.03 0.615932111 0.401212553 2 1 1.5 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 16303469 16303475 + 3R_16303469_16303475_+ 0.657714765 0.653646146 0.655680456 0.002877005 gish FBtr0334606 16301873 16304768 3R + 16303447 16303492 3'utr gish FlyBase G43416.1 AGATATACAGTATGAATCAATAGGCAGCTTGGTTTAGCTCTGTTTT 20 16303467 0.936824512 2 19 151 0.961538462 1.397940009 0.076923077 0.25 0.423076923 20 1 0 25 3R:16303447-16303492 7 gish FBtr0334606 16301873 16304768 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 16303455 16303490 3'utr gish FlyBase G32809.1 AGTATGAATCAATAGGCAGCTTGGTTTAGCTCTGTT 19 16303467 0.930434057 2 19 123 1 1.361727836 0.043478261 0.157894737 0.304347826 19 0 0 23 3R:16303455-16303490 7 19.5 2317 FBgn0250823 3945.283333 157.2966667 241.69 0.004942611 0.123969569 0.080681865 2 2 2 0.2 dme-miR-14-3p 7mer-m8 AAGACTG 3R 16311066 16311072 - 3R_16311066_16311072_- 0.434433577 0.56105598 0.497744779 0.089535558 Sulf1 FBtr0334699|FBtr0083273|FBtr0334700 16310540|16310540|16310540 16311180|16311180|16311180 3R - 16311047 16311155 3'utr Sulf1 FlyBase G51728.1 ACATATCCAATGCGTATCCTTTGTACCTTGCTTGCCCGCTTCTAATCTTTGGTTTGCCCCATTTAATGTTTTCATACATAAATAAGACTGTGTTTTAATCTATATTCGT 126 16311064 0.688923571 17 117 1143 0.939189189 2.1430148 0.27027027 0.134920635 0.263513514 126 9 0 139 3R:16311047-16311155 7 Sulf1 FBtr0334700|FBtr0083273|FBtr0334699 16310540|16310540|16310540 16311180|16311180|16311180 AAGACTG 7mer-m8 dme-miR-14-3p 3R - 16311048 16311091 3'utr Sulf1 FlyBase G39072.1 AATGTTTTCATACATAAATAAGACTGTGTTTTAATCTATATTCG 62 16311064 0.651622545 8 56 492 0.896551724 1.591064607 0.022988506 0.322580645 0.517241379 62 8 1 78 3R:16311048-16311091 7 63 2318 FBgn0040271 314.1 7.876666667 12.08 0.200573066 7.998307237 5.215231788 -8 -8 -8 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 16311128 16311133 - 3R_16311128_16311133_- 0.993166554 0.977249104 0.985207829 0.011255372 Sulf1 FBtr0334699|FBtr0083273|FBtr0334700 16310540|16310540|16310540 16311180|16311180|16311180 3R - 16311047 16311155 3'utr Sulf1 FlyBase G51728.1 ACATATCCAATGCGTATCCTTTGTACCTTGCTTGCCCGCTTCTAATCTTTGGTTTGCCCCATTTAATGTTTTCATACATAAATAAGACTGTGTTTTAATCTATATTCGT 126 16311134 0.688923571 17 117 1143 0.939189189 2.1430148 0.27027027 0.134920635 0.263513514 126 9 0 139 3R:16311047-16311155 6 Sulf1 FBtr0334700|FBtr0083273|FBtr0334699 16310540|16310540|16310540 16311180|16311180|16311180 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 16311105 16311152 3'utr Sulf1 FlyBase G39073.1 TATCCAATGCGTATCCTTTGTACCTTGCTTGCCCGCTTCTAATCTTTG 30 16311134 0.659523187 7 28 303 0.936170213 1.643452676 0.574468085 0.466666667 0.659574468 30 3 0 44 3R:16311105-16311152 6 45.5 2319 FBgn0040271 314.1 7.876666667 12.08 0.144858325 5.776555226 3.766556291 1 1 1 0.2 dme-miR-317-5p 6mer3-8 GTATCC 3R 16345443 16345448 + 3R_16345443_16345448_+ 0.982833312 0.991880739 0.987357025 0.006397478 pad FBtr0301514 16345403 16345829 3R + 16345407 16345551 3'utr pad FlyBase G43431.1 AGTCCTTAAGCTCGAAAAGTGAATCCACCTTACCTCGTATCCTAGTCCGCGGTCTATTCCAACATCTGGTCGCCAGTTCCTTGTATTGTATAGTTTTCGGTAAATTTTCCTTTTAATTTTCTTTGTGCAATATTATTTATAGCAA 66 16345446 0.844306844 20 61 588 0.906666667 1.531478917 0.066666667 0.136363636 0.24 66 6 1 68 3R:16345407-16345551 6 pad FBtr0301514 16345403 16345829 GTATCC 6mer3-8 dme-miR-317-5p 3R + 16345398 16345464 stop_codon pad FlyBase G32816.1 AAAGTAATTAGTCCTTAAGCTCGAAAAGTGAATCCACCTTACCTCGTATCCTAGTCCGCGGTCTATT 27 16345445 0.986547304 9 24 177 0.861111111 1.491361694 0.027777778 0.259259259 0.444444444 27 5 0 31 3R:16345398-16345464 6 25.5 2320 FBgn0038418 118 4.38 6.753333333 0.216101695 5.821917808 3.775913129 -3 -2 -2.5 0.2 dme-miR-1006-3p 8mer-A1 CGAATTTA 3R 16350969 16350976 - 3R_16350969_16350976_- 0.669527786 0.555711628 0.612619707 0.080480207 CG10311 FBtr0083324|FBtr0345202 16350904|16350784 16351129|16351129 3R - 16350916 16351061 3'utr CG10311 FlyBase G51743.1 TCCTAGCTTCCTATGTTCGTTTTTAGTGATTATGTCTAACTAATAATTATAATTTAGTTGAGGCGAGCCAGCCCTTCGCTCACATCGAATTTACGCGGCCCGTGGCATTAAGTGCAATGGAATTATGTATTTAACATTTAAATAAA 17 16350977 0.986917487 9 14 128 0.888888889 1.204119983 0 0.058823529 0.111111111 17 2 0 16 3R:16350916-16351061 8 CG10311 FBtr0345202|FBtr0083324 16350784|16350904 16351129|16351129 CGAATTTA 8mer-A1 dme-miR-1006-3p 3R - 16350926 16351004 3'utr CG10311 FlyBase G39084.1 TTGAGGCGAGCCAGCCCTTCGCTCACATCGAATTTACGCGGCCCGTGGCATTAAGTGCAATGGAATTATGTATTTAACA 19 16350977 0.971104192 9 16 95 0.793103448 1.361727836 0.310344828 0.421052632 0.620689655 19 6 0 23 3R:16350926-16351004 8 8.5 2321 FBgn0038420 2 0.253333333 0.403333333 4.25 33.55263158 21.07438017 1 1 1 0.2 dme-miR-283-5p 7mer-A1 GATATTA 3R 16358359 16358365 - 3R_16358359_16358365_- 0.764290506 0.658042299 0.711166402 0.075128823 CG17931 FBtr0332177|FBtr0345208|FBtr0083323 16357608|16357533|16358138 16358541|16358541|16358541 3R - 16358148 16358383 3'utr CG17931 FlyBase G51748.1 TGTATACAACTACGCATAGATATTACCGGGCTGTACAGCACGCGACATAGCAATAGCAATAGCAAGTGCCACCCAAGGACTTCGATTCTGTTCCGGTTTTTGTTCATTTTCGTTTGCAGTGCTGCTGTACGATAATTAAGTAATCTTACATTTTATTTCTCCACCTACCTGACTAAATTATTTACTGTAATGTATATATATAAATTTTCAAATAAAACATAATATGCAGCCGACAG 233 16358361 0.897830772 39 216 1412 0.919413919 1.320492475 0.124542125 0.141630901 0.267399267 233 11 11 251 3R:16358148-16358383 7 CG17931 FBtr0083323|FBtr0345208|FBtr0332177 16358138|16357533|16357608 16358541|16358541|16358541 GATATTA 7mer-A1 dme-miR-283-5p 3R - 16358240 16358378 3'utr CG17931 FlyBase G39091.1 ACAACTACGCATAGATATTACCGGGCTGTACAGCACGCGACATAGCAATAGCAATAGCAAGTGCCACCCAAGGACTTCGATTCTGTTCCGGTTTTTGTTCATTTTCGTTTGCAGTGCTGCTGTACGATAATTAAGTAAT 85 16358352 0.74668833 15 80 465 0.937984496 2.08278537 0.108527132 0.458823529 0.643410853 85 8 0 121 3R:16358240-16358378 7 89 2322 FBgn0038421 429.6933333 71.91666667 110.2133333 0.207124461 1.237543453 0.8075248 -4 -13 -8.5 0.2 dme-miR-252-5p 7mer-m8 GTACTTA 3R 16434643 16434649 + 3R_16434643_16434649_+ 0.585115648 0.569954723 0.577535185 0.010720375 CG17565 FBtr0083286 16434515 16434740 3R + 16434624 16434668 3'utr CG17565 FlyBase G43447.1 TTTCGCTTCTTGTATAAATGTACTTATTGGAAAAGGAATTGATTA 14 16434642 0.987908723 4 14 131 1 1.204119983 0.1875 0.071428571 0.1875 14 0 0 16 3R:16434624-16434668 7 CG17565 FBtr0083286 16434515 16434740 GTACTTA 7mer-m8 dme-miR-252-5p 3R + 16434616 16434661 3'utr CG17565 FlyBase G32828.1 ATTGTATTTTTCGCTTCTTGTATAAATGTACTTATTGGAAAAGGAA 17 16434642 0.986627752 3 16 140 0.954545455 1.322219295 0.227272727 0.235294118 0.409090909 17 1 0 21 3R:16434616-16434661 7 15.5 2323 FBgn0038424 261 20.12666667 30.60666667 0.059386973 0.770122557 0.506425615 1 1 1 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3R 16446862 16446868 - 3R_16446862_16446868_- 0.487886545 0.520928329 0.504407437 0.023364081 Pak3 FBtr0330047|FBtr0083312|FBtr0305003 16445005|16446744|16445005 16451158|16451200|16451200 3R - 16446820 16447121 3'utr Pak3 FlyBase G51784.1 GGACAGAGAGATGAGCAGGGGCCGAAAAACTCGAAGGAAACCGTCGCCAAACCGTGGATCCATATCGCATCGCTCGAGCAGTTCATCGATGGCAGGGGGGCGGGGTTATCGCTTAGATTAGATTGTCCTATGGCAAATTAGCTTACTTCAACAACGCACACAAACACGCACATATGATATACATAGATACTGTATTATTAAATGTAGGGACATAAGTTTGATTACTCTTTATATACCCGTATATATACATAATTGTGATTTAAGCGATTTTATCAAATCAGCATTATGCGACTCTTTATAAA 195 16446844 0.985377625 40 186 1526 0.960352423 1.861335239 0.145374449 0.138461538 0.259911894 195 7 2 218 3R:16446820-16447121 7 Pak3 FBtr0330047|FBtr0083312|FBtr0305003 16445005|16446744|16445005 16451158|16451200|16451200 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 16446798 16446902 3'utr Pak3 FlyBase G39114.1 GATTACTCTTTATATACCCGTATATATACATAATTGTGATTTAAGCGATTTTATCAAATCAGCATTATGCGACTCTTTATAAAATTCGTCGTAGTCAGTAAGTGC 46 16446862 0.984882078 10 44 400 0.971830986 1.838849091 0.070422535 0.413043478 0.61971831 46 2 0 69 3R:16446798-16446902 7 43 2324 FBgn0044826 2696.55 65.35333333 100.3933333 0.015946302 0.657961848 0.428315293 -24 -6 -15 0.2 dme-miR-305-5p 6mer2-7 GTACAA 3R 16451021 16451026 - 3R_16451021_16451026_- 0.779521359 0.999996521 0.88975894 0.155899438 Pak3 FBtr0330047|FBtr0083312|FBtr0305003 16445005|16446744|16445005 16451158|16451200|16451200 3R - 16451018 16451090 5'utr Pak3 FlyBase G51785.1 GTTTTGTGTGGACGAAACCGGAACTGGAACTGGAATAGAATGCTGACCGTAGTCTTTGTAGTATGTACAACCG 15 16451035 0.716082658 9 13 87 0.888888889 1.204119983 0.166666667 0.133333333 0.277777778 15 2 0 16 3R:16451018-16451090 6 Pak3 FBtr0330047|FBtr0083312|FBtr0305003 16445005|16446744|16445005 16451158|16451200|16451200 GTACAA 6mer2-7 dme-miR-305-5p 3R - 16451023 16451086 5'utr Pak3 FlyBase G39115.1 TGTGTGGACGAAACCGGAACTGGAACTGGAATAGAATGCTGACCGTAGTCTTTGTAGTATGTAC 18 16451035 0.92171435 9 17 110 0.958333333 1.06069784 0.208333333 0.277777778 0.458333333 18 0 1 23 3R:16451023-16451086 3 2 2325 FBgn0044826 2696.55 65.35333333 100.3933333 0.000741688 0.030602877 0.019921642 9 9 9 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 16457729 16457736 + 3R_16457729_16457736_+ 0.620043142 0.624516048 0.622279595 0.003162818 CG14883 FBtr0083291 16457662 16458233 3R + 16457716 16457917 3'utr CG14883 FlyBase G43455.1 TACACAAACTGTTTGCATTTAGCTGGCAGAGCTTAGCCCTTAAGACAAACTTAAGTACGCATGTGTTTTTGTAGAAGCTTTAGAAAGTATTATCCCAAGCTTACCGGTACCAGTGAAATGGAAGATATAATTTAGATAGTTTATGTGCTTTACTTTTGTTTACCTGAAGCTTTTATTCATTTTATTGACGTCCTAATTTATT 210 16457728 0.876746571 28 204 1817 0.971428571 2.376576957 0.155102041 0.142857143 0.265306122 210 7 0 238 3R:16457716-16457917 8 CG14883 FBtr0083291 16457662 16458233 TGCATTTA 8mer-A1 dme-miR-277-3p 3R + 16457653 16457756 stop_codon CG14883 FlyBase G32834.1 TGAAAGCCTAAGAGTCCTTCAGGATTTGAACGAACGATAACGACTTAGATCGACGCACACACATACACAAACTGTTTGCATTTAGCTGGCAGAGCTTAGCCCTT 53 16457728 0.984126712 11 50 389 0.935064935 1.556302501 0.220779221 0.320754717 0.532467532 53 4 1 72 3R:16457653-16457756 8 51 2326 FBgn0038432 123 8.256666667 12.72666667 0.414634146 6.176826807 4.007333683 1 1 1 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 16458164 16458169 + 3R_16458164_16458169_+ 0.306161003 0.444722829 0.375441916 0.097977988 CG14883 FBtr0083291 16457662 16458233 3R + 16458135 16458252 3'utr CG14883 FlyBase G43458.1 GTTTACCAGCATTATATGTATATGTCTATACCAAAAACCAGAATTAAAAACTACTTTTATTGTGATTATAAAAGAAAATAAAGATGATTGCAACGATTGATTTAAGTTCATACACCTG 33 16458163 0.955762528 13 30 236 0.9 1.255272505 0.275 0.181818182 0.325 33 3 1 36 3R:16458135-16458252 6 CG14883 FBtr0083291 16457662 16458233 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 16458150 16458209 3'utr CG14883 FlyBase G32839.1 ATGTATATGTCTATACCAAAAACCAGAATTAAAAACTACTTTTATTGTGATTATAAAAGA 9 16458163 0.917966287 5 9 67 1 1.079181246 0.25 0.222222222 0.416666667 9 0 0 12 3R:16458150-16458209 6 9 2327 FBgn0038432 123 8.256666667 12.72666667 0.073170732 1.09002826 0.707176532 1 1 1 0.2 dme-miR-980-5p 7mer-m1 AAAAACT 3R 16458393 16458399 - 3R_16458393_16458399_- 0.761190072 0.663621882 0.712405977 0.068991136 CG42232 FBtr0290134 16458278 16458598 3R - 16458373 16458505 3'utr CG42232 FlyBase G51802.1 ATTTATGTATCAATTAATGAAGGCGTGTTATTTTTTAATTTCTCTTGTTAATCCAACCCATTTCGGTGGGATACCGTTGAATGGAATGGCTCCCCTCGCTCAGAACAAAAACTAACCTTAATAGATTTAAGGC 36 16458392 0.971108051 16 34 228 0.947368421 1.255272505 0.105263158 0.055555556 0.105263158 36 1 1 36 3R:16458373-16458505 7 CG42232 FBtr0290134 16458278 16458598 AAAAACT 7mer-m1 dme-miR-980-5p 3R - 16458363 16458428 3'utr CG42232 FlyBase G39127.1 TGAATGGAATGGCTCCCCTCGCTCAGAACAAAAACTAACCTTAATAGATTTAAGGCATTTAAAAAT 20 16458420 0.960929876 11 19 95 0.966666667 1.462397998 0.333333333 0.45 0.633333333 20 1 0 29 3R:16458363-16458428 7 16 2328 FBgn0250754 5895.886667 65.18333333 100.1066667 0.002713756 0.245461519 0.159829515 -7 21 7 0.2 dme-bantam-3p 8mer-A1 TGATCTCA 3R 16642258 16642265 + 3R_16642258_16642265_+ 0.628097306 0.629874383 0.628985845 0.001256599 nonA-l FBtr0333727|FBtr0083335 16642219|16642219 16643112|16642773 3R + 16642183 16642323 stop_codon nonA-l FlyBase G43468.1 ACGGACACATTGATTCATGGGGACACCGACGCTTCTAGACACTGAAACCTATATAGATAGCGACGAAAACAATAGTGATCTCATTAGTTACGCATAATATCGGACATTTCGCTCGGCTATGCGTGAACAATAACATAAATA 632 16642255 0.928516887 20 623 4300 0.987359551 2.545925329 0.130617978 0.109177215 0.209269663 632 8 1 703 3R:16642183-16642323 8 nonA-l FBtr0333727|FBtr0083335 16642219|16642219 16643112|16642773 TGATCTCA 8mer-A1 dme-bantam-3p 3R + 16642125 16642324 stop_codon nonA-l FlyBase G32850.1 AGCAACAATTCAACAATGGCTGGACCTGGAGGTCCAGATAATAGCGACGGAAACCAACACGGACACATTGATTCATGGGGACACCGACGCTTCTAGACACTGAAACCTATATAGATAGCGACGAAAACAATAGTGATCTCATTAGTTACGCATAATATCGGACATTTCGCTCGGCTATGCGTGAACAATAACATAAATAA 350 16642256 0.97857187 21 336 2267 0.960227273 1.75076545 0.164772727 0.388571429 0.59469697 350 13 8 507 3R:16642125-16642324 8 469.5 2329 FBgn0015520 285.6666667 13.51 20.79666667 1.643523921 34.75203553 22.57573329 3 2 2.5 0.2 dme-miR-31a-5p 7mer-A1 CTTGCCA 3R 16644817 16644823 + 3R_16644817_16644823_+ 0.369588804 0.671398745 0.520493775 0.213411827 CG10326 FBtr0083336|FBtr0333728 16644750|16644750 16645171|16645171 3R + 16644768 16644882 3'utr CG10326 FlyBase G43474.1 AAACTCATCACCATTTGACCAAAAATATAAAACATGCCTAAGTCATCTACTTGCCATTATGCACACATCGCATCACTAAATCACACATTAGGCGCATTGAATTTGAAACTATAAA 19 16644815 0.758719376 13 16 106 0.875 1.021189299 0.291666667 0.210526316 0.375 19 2 1 21 3R:16644768-16644882 7 CG10326 FBtr0333728|FBtr0083336 16644750|16644750 16645171|16645171 CTTGCCA 7mer-A1 dme-miR-31a-5p 3R + 16644750 16644840 stop_codon CG10326 FlyBase G32854.1 AAAGGAAAGCAACCAGATAAACTCATCACCATTTGACCAAAAATATAAAACATGCCTAAGTCATCTACTTGCCATTATGCACACATCGCAT 11 16644816 0.991697811 7 8 78 0.777777778 1.146128036 0.055555556 0.545454545 0.722222222 11 4 0 14 3R:16644750-16644840 7 6.5 2330 FBgn0038453 605.7533333 63.22 96.46 0.01073044 0.102815565 0.067385445 2 1 1.5 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3R 16645060 16645066 + 3R_16645060_16645066_+ 0.520742564 0.518861985 0.519802274 0.001329785 CG10326 FBtr0083336|FBtr0333728 16644750|16644750 16645171|16645171 3R + 16644930 16645149 3'utr CG10326 FlyBase G43475.1 AACTAGCAAATCCGTGGTTCTGGCCCCATCACATCTCCTACTATAAGTTTGTAACATGTAAGACAGAAGTATTCTCGAAACGAGGCGTACGGAGAGAGAAAAAAACGCGCAACAAAAGACAAGGCATTTTTGTGATTATTTTGTGAGTTAATTGAAATTTATGATAATCCCAAGTAAGATAAAAAAAGGAACTTAAGCGTCTAATGAACTATATTTAAAT 229 16645059 0.989504324 28 216 2102 0.952702703 2.149219113 0.097972973 0.227074236 0.402027027 229 13 1 282 3R:16644930-16645149 7 CG10326 FBtr0333728|FBtr0083336 16644750|16644750 16645171|16645171 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 16644978 16645135 3'utr CG10326 FlyBase G32855.1 TTGTAACATGTAAGACAGAAGTATTCTCGAAACGAGGCGTACGGAGAGAGAAAAAAACGCGCAACAAAAGACAAGGCATTTTTGTGATTATTTTGTGAGTTAATTGAAATTTATGATAATCCCAAGTAAGATAAAAAAAGGAACTTAAGCGTCTAATG 134 16645059 0.989444456 17 124 1189 0.93442623 1.755874856 0.202185792 0.305970149 0.491803279 134 10 2 171 3R:16644978-16645135 7 146 2331 FBgn0038453 605.7533333 63.22 96.46 0.241022198 2.309395761 1.513580759 1 1 1 0.2 dme-miR-277-3p 6mer3-8 TGCATT 3R 16989923 16989928 + 3R_16989923_16989928_+ 0.844318922 0.990360384 0.917339653 0.103266935 MESK4 FBtr0337059|FBtr0083367 16989884|16989884 16990419|16990321 3R + 16989893 16990007 3'utr MESK4 FlyBase G43490.1 TGCCGAAGGAGGGAGGGGTATTCCACTGATTGCATTCTGTCCCATTGTTGGACTATTTTTAACCGTCCGCTGGATTATCAGCGCTGCCCTCGCTGCCCTGCAGTCGTCGATTGCA 26 16989922 0.982296852 13 26 197 1 1.491361694 0.258064516 0.192307692 0.322580645 26 0 0 31 3R:16989893-16990007 6 MESK4 FBtr0083367|FBtr0337059 16989884|16989884 16990321|16990419 TGCATT 6mer3-8 dme-miR-277-3p 3R + 16989896 16990018 3'utr MESK4 FlyBase G32871.1 CGAAGGAGGGAGGGGTATTCCACTGATTGCATTCTGTCCCATTGTTGGACTATTTTTAACCGTCCGCTGGATTATCAGCGCTGCCCTCGCTGCCCTGCAGTCGTCGATTGCACCTACAGTGCT 34 16989926 0.982284608 17 33 254 0.961538462 1.698970004 0.480769231 0.382352941 0.596153846 34 2 0 50 3R:16989896-16990018 6 18.5 2332 FBgn0043069 8.44 0.73 1.12 2.191943128 25.34246575 16.51785714 1 -3 -1 0.2 dme-miR-277-3p 6mer3-8 TGCATT 3R 16994135 16994140 + 3R_16994135_16994140_+ 0.969449434 0.999461135 0.984455285 0.021221477 CG31274 FBtr0083369 16994096 16994532 3R + 16994101 16994219 3'utr CG31274 FlyBase G43495.1 AATATGCCGAAGGAGGGAGGGGTATTCCACTGATTGCATTCTGTCCCATTGTTGGACTATTTTTAACCGTCCGCTGGATTATCAGCGCTGCCCTCGCTGCCCTGCAGTCGTCGATTGCA 32 16994134 0.98470536 15 31 249 0.970588235 1.51851394 0.264705882 0.0625 0.117647059 32 1 0 33 3R:16994101-16994219 6 CG31274 FBtr0083369 16994096 16994532 TGCATT 6mer3-8 dme-miR-277-3p 3R + 16994101 16994159 3'utr CG31274 FlyBase G32875.1 AATATGCCGAAGGAGGGAGGGGTATTCCACTGATTGCATTCTGTCCCATTGTTGGACTA 18 16994134 0.984050713 7 17 131 1 1.397940009 0.2 0.388888889 0.56 18 0 0 25 3R:16994101-16994159 6 18 2333 FBgn0051274 0 0 0 Inf Inf Inf 1 1 1 0.2 dme-miR-8-3p 6mer2-7 AGTATT 3R 16994627 16994632 - 3R_16994627_16994632_- 0.717674113 0.849644075 0.783659094 0.093316882 CG17556 FBtr0083375 16994540 16994810 3R - 16994550 16994681 3'utr CG17556 FlyBase G51890.1 AAAAACAATTTTATAGTCAGTGCATCCAAGCAACTGTTTTTGGTGGTCTAGTATTGTTGACGGCATTGAAACCGGATAATTTAAAACATTTATTATTGAGGTAGGCAAAAATAGTCCTGTAATAAATTTAGA 35 16994641 0.987332024 15 34 293 0.97826087 1.653212514 0.130434783 0.228571429 0.413043478 35 1 0 45 3R:16994550-16994681 6 CG17556 FBtr0083375 16994540 16994810 AGTATT 6mer2-7 dme-miR-8-3p 3R - 16994596 16994655 3'utr CG17556 FlyBase G39189.2 CAAGCAACTGTTTTTGGTGGTCTAGTATTGTTGACGGCATTGAAACCGGATAATTTAAAA 14 16994641 0.985346728 5 12 104 0.888888889 1.204119983 0 0.214285714 0.388888889 14 2 0 16 3R:16994596-16994655 6 16.5 2334 FBgn0038462 431.2066667 43.27333333 66.41 0.038264715 0.381297181 0.248456558 9 9 9 0.2 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 16999384 16999391 + 3R_16999384_16999391_+ 0.381722685 0.36642286 0.374072772 0.010818592 CG3534 FBtr0083370 16999271 16999449 3R + 16999295 16999421 3'utr CG3534 FlyBase G43509.1 CATTCCAGTTTATACTCCGTACATTCACAAACTGATTCCTTCTTAAACGTCTCCTGTAATTGACAGAACTTAAGTGCAATTAACAAATTCTGTGATTGACGATTTATTACAAATTTATGCGAAACCA 89 16999383 0.982934586 17 84 636 0.92920354 1.322219295 0.309734513 0.179775281 0.353982301 89 4 4 105 3R:16999295-16999421 8 CG3534 FBtr0083370 16999271 16999449 CTGTGATT 8mer-m1 dme-miR-308-3p 3R + 16999317 16999409 3'utr CG3534 FlyBase G32883.1 ATTCACAAACTGATTCCTTCTTAAACGTCTCCTGTAATTGACAGAACTTAAGTGCAATTAACAAATTCTGTGATTGACGATTTATTACAAATT 59 16999383 0.761703922 13 56 393 0.957746479 1.832508913 0.225352113 0.169491525 0.309859155 59 3 0 68 3R:16999317-16999409 8 54 2335 FBgn0038463 327.35 20.21 30.99 0.164961051 2.671944582 1.74249758 1 1 1 0.2 dme-miR-92b-3p 7mer-A1 TGCAATA 3R 17087931 17087937 + 3R_17087931_17087937_+ 0.700786489 0.776147204 0.738466846 0.053288062 GckIII FBtr0083399 17087725 17087988 3R + 17087902 17087951 3'utr GckIII FlyBase G43566.1 AGCATATAATATGTATTCGTTTGTTTATCTGCAATATTAATCTAATGTAA 16 17087929 0.990468693 3 16 189 1 1.230448921 0.058823529 0.0625 0.117647059 16 0 0 17 3R:17087902-17087951 7 GckIII FBtr0083399 17087725 17087988 TGCAATA 7mer-A1 dme-miR-92b-3p 3R + 17087920 17087948 3'utr GckIII FlyBase G32932.1 GTTTGTTTATCTGCAATATTAATCTAATG 5 17087929 0.759707324 2 5 50 1 0.84509804 0.428571429 0.4 0.571428571 5 0 0 7 3R:17087920-17087948 7 10 2336 FBgn0266465 620.1 30.44666667 46.71666667 0.016126431 0.328443179 0.214056368 2 2 2 0.2 dme-bantam-3p 6mer3-8 TGATCT 3R 17389770 17389775 + 3R_17389770_17389775_+ 0.967868093 0.565520615 0.766694354 0.284502646 lute FBtr0306209|FBtr0306210|FBtr0083435|FBtr0330037 17388979|17388979|17388979|17389153 17390265|17390265|17390265|17390265 3R + 17389759 17389789 3'utr lute FlyBase G43607.1 ATACACACATCTGATCTGATAATGATAAACT 6 17389769 0.854373975 3 5 37 0.857142857 0.77815125 0.142857143 0.166666667 0.285714286 6 1 0 6 3R:17389759-17389789 6 lute FBtr0306209|FBtr0306210|FBtr0083435|FBtr0330037 17388979|17388979|17388979|17389153 17390265|17390265|17390265|17390265 TGATCT 6mer3-8 dme-bantam-3p 3R + 17389723 17389801 3'utr lute FlyBase G32960.1 ATACCAAACATATTTTTGCCAGCATATACCTAACATATACACACATCTGATCTGATAATGATAAACTATAGTCCTAAAC 9 17389769 0.984205745 7 8 63 0.9 0.653212514 0.3 0.111111111 0.2 9 0 1 9 3R:17389723-17389801 6 6.5 2337 FBgn0262871 490.37 16.86 25.93333333 0.013255297 0.385527877 0.250642674 1 1 1 0.2 dme-miR-12-5p 6mer2-7 ATACTC 3R 17395270 17395275 - 3R_17395270_17395275_- 0.696314883 0.67656104 0.686437961 0.013968117 Sur-8 FBtr0083447|FBtr0339531|FBtr0083448 17395197|17395197|17395197 17397335|17397176|17397335 3R - 17395253 17395298 3'utr Sur-8 FlyBase G51982.1 AGATGATTAAGTCAAGCATAATGATACTCCTAAAAACAAAAATCAT 56 17395277 0.948712545 4 51 254 0.931506849 1.531478917 0.109589041 0.214285714 0.397260274 56 4 1 68 3R:17395253-17395298 6 Sur-8 FBtr0083448|FBtr0339531|FBtr0083447 17395197|17395197|17395197 17397335|17397176|17397335 ATACTC 6mer2-7 dme-miR-12-5p 3R - 17395258 17395292 3'utr Sur-8 FlyBase G39249.1 TTAAGTCAAGCATAATGATACTCCTAAAAACAAAA 42 17395277 0.734667913 4 38 194 0.929577465 1.819543936 0.098591549 0.476190476 0.690140845 42 5 0 66 3R:17395258-17395292 6 48.5 2338 FBgn0038504 2699.363333 76.09666667 116.9633333 0.0179672 0.637347234 0.414659865 2 2 2 0.2 dme-miR-980-5p 6mer3-8 GAAAAA 3R 17396625 17396630 - 3R_17396625_17396630_- 0.93994052 0.939227904 0.939584212 0.000503884 Sur-8 FBtr0083447|FBtr0339531|FBtr0083448 17395197|17395197|17395197 17397335|17397176|17397335 3R - 17396627 17396659 3'utr Sur-8 FlyBase G51989.1 AAAAAAACGCAAGCGCCAAGGAATTGTTTGAAA 18 17396633 0.97268292 4 12 70 0.666666667 1.146128036 0.142857143 0.166666667 0.285714286 18 7 0 14 3R:17396627-17396659 3 Sur-8 FBtr0083448|FBtr0339531|FBtr0083447 17395197|17395197|17395197 17397335|17397176|17397335 GAAAAA 6mer3-8 dme-miR-980-5p 3R - 17396576 17396654 3'utr Sur-8 FlyBase G39255.1 AACGCAAGCGCCAAGGAATTGTTTGAAAAAATTTAAAACTAAAAACAAAAAGTGGTTAAGAAATTATTAATCTGTATAC 14 17396632 0.951801818 6 13 57 0.888888889 1.204119983 0.111111111 0.214285714 0.388888889 14 2 0 16 3R:17396576-17396654 6 13.5 2339 FBgn0038504 2699.363333 76.09666667 116.9633333 0.005001179 0.177405931 0.115420787 3 2 2.5 0.2 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 17396895 17396902 - 3R_17396895_17396902_- 0.597100422 0.601501902 0.599301162 0.00311233 Sur-8 FBtr0083447|FBtr0339531|FBtr0083448|FBtr0339532 17395197|17395197|17395197|17396664 17397335|17397176|17397335|17397335 3R - 17396824 17396999 3'utr Sur-8 FlyBase G51991.1 TGATATCAGCTACTTTCCCCAAAGCGATTCTAATTGCTTAACCTTCTACTTAGGCTTACTCCCTTAAACCGACTGGAGTGCGTTGGCTGACAAACGATAGCTTTAAAACGTTATACCAATGTCCCGCGTATTGTAAACTGCCCCGATTTGCTTTTTATTCTTTCTGTGTTCAATCA 82 17396902 0.939516592 26 80 537 0.988636364 1.638489257 0.284090909 0.048780488 0.113636364 82 0 1 87 3R:17396824-17396999 8 Sur-8 FBtr0339532|FBtr0083448|FBtr0339531|FBtr0083447 17396664|17395197|17395197|17395197 17397335|17397335|17397176|17397335 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R - 17396837 17396949 3'utr Sur-8 FlyBase G39257.1 TAGGCTTACTCCCTTAAACCGACTGGAGTGCGTTGGCTGACAAACGATAGCTTTAAAACGTTATACCAATGTCCCGCGTATTGTAAACTGCCCCGATTTGCTTTTTATTCTTT 68 17396902 0.926844242 18 63 395 0.947916667 1.260071388 0.427083333 0.352941176 0.541666667 68 1 4 91 3R:17396837-17396949 8 46.5 2340 FBgn0038504 2699.363333 76.09666667 116.9633333 0.017226284 0.611064874 0.397560489 0 0 0 0.2 dme-miR-1007-3p 6mer3-8 TGAGCT 3R 17532337 17532342 - 3R_17532337_17532342_- 0.998483277 0.978150696 0.988316987 0.014377319 CG5823 FBtr0083505|FBtr0321266 17532323|17532323 17532719|17532719 3R - 17532321 17532357 3'utr CG5823 FlyBase G52005.1 AAGCCCGGCAACATATGAGCTCGTGTACAAATTAACC 11 17532342 0.948921814 4 10 49 0.933333333 1.146128036 0.2 0.272727273 0.466666667 11 1 0 14 3R:17532321-17532357 6 CG5823 FBtr0083505|FBtr0321266 17532323|17532323 17532719|17532719 TGAGCT 6mer3-8 dme-miR-1007-3p 3R - 17532320 17532403 3'utr CG5823 FlyBase G39270.1 AATGCAACGTGAATAATGCCAGAAATATGTTTGTAAATGAATAAAGAAGCCCGGCAACATATGAGCTCGTGTACAAATTAACCA 24 17532342 0.88281547 5 22 95 0.864864865 1.505149978 0.189189189 0.291666667 0.540540541 24 5 0 32 3R:17532320-17532403 6 12 2341 FBgn0038515 447.3266667 29.51666667 45.11666667 0.026826033 0.406549972 0.265977096 0 0 0 0.2 dme-bantam-3p 7mer-m8 TGATCTC 3R 17544044 17544050 + 3R_17544044_17544050_+ 0.494512959 0.49251784 0.4935154 0.001410819 SF1 FBtr0331707 17543545 17545148 3R + 17544016 17544084 3'utr SF1 FlyBase G43624.1 AGGGTATCGAAGTGCCCGAGGGCCATAATGATCTCCGCAGAATGCAGTTGCGAGAACTGGCTCAGCTGA 119 17544044 0.730581036 6 115 399 0.965986395 1.45331834 0.401360544 0.201680672 0.353741497 119 1 4 142 3R:17544016-17544084 7 SF1 FBtr0331707 17543545 17545148 TGATCTC 7mer-m8 dme-bantam-3p 3R + 17544016 17544063 3'utr SF1 FlyBase G32972.1 AGGGTATCGAAGTGCCCGAGGGCCATAATGATCTCCGCAGAATGCAGT 60 17544044 0.697515398 2 58 201 0.977272727 1.934498451 0.431818182 0.35 0.556818182 60 2 0 86 3R:17544016-17544063 7 84.5 2342 FBgn0025571 727 34.72 53.27 0.116231087 2.43375576 1.586258682 0 0 0 0.2 dme-miR-980-3p 6mer3-8 GGCAGC 3R 17544575 17544580 + 3R_17544575_17544580_+ 0.999006734 0.958637099 0.978821917 0.028545618 SF1 FBtr0331707 17543545 17545148 3R + 17544534 17544594 3'utr SF1 FlyBase G43627.1 ATGGAGCACGGTATGGGATTGGACCAGCACGGTCACGGTTTGGCAGCGATGGATCACGGCA 11 17544574 0.95117855 4 10 44 1 1.079181246 0.333333333 0.090909091 0.166666667 11 0 0 12 3R:17544534-17544594 6 SF1 FBtr0331707 17543545 17545148 GGCAGC 6mer3-8 dme-miR-980-3p 3R + 17544551 17544607 3'utr SF1 FlyBase G32974.1 ATTGGACCAGCACGGTCACGGTTTGGCAGCGATGGATCACGGCATGAGCCTTGGCAT 7 17544574 0.956565382 3 7 33 1 1.041392685 0.181818182 0.428571429 0.636363636 7 0 0 11 3R:17544551-17544607 6 6.5 2343 FBgn0025571 727 34.72 53.27 0.008940853 0.187211982 0.122019899 1 1 1 0.2 dme-miR-980-5p 6mer3-8 GAAAAA 3R 17673893 17673898 - 3R_17673893_17673898_- 0.817859279 0.999997114 0.908928196 0.128790873 alt FBtr0335026|FBtr0335027 17673730|17673730 17674823|17674823 3R - 17673853 17673928 3'utr alt FlyBase G52043.1 ATTGTCGGAACCTGTTGCATGCGACATACTGAAAAATTAGGAAAACCAACAAATTCAAGCCCATCAGCAACCACAA 9 17673909 0.920816002 6 9 29 1 1.041392685 0.090909091 0.111111111 0.272727273 9 0 0 11 3R:17673853-17673928 6 alt FBtr0335027|FBtr0335026 17673730|17673730 17674823|17674823 GAAAAA 6mer3-8 dme-miR-980-5p 3R - 17673872 17673924 3'utr alt FlyBase G39298.1 TCGGAACCTGTTGCATGCGACATACTGAAAAATTAGGAAAACCAACAAATTCA 6 17673892 0.950685687 4 5 26 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3R:17673872-17673924 6 4 2344 FBgn0038535 6868.54 219.92 337.8266667 0.000582365 0.018188432 0.011840392 11 -6 2.5 0.2 dme-miR-980-3p 6mer3-8 GGCAGC 3R 17674044 17674049 - 3R_17674044_17674049_- 0.589236939 0.589403005 0.589319972 0.00011745 alt FBtr0335026|FBtr0335027 17673730|17673730 17674823|17674823 3R - 17674023 17674068 3'utr alt FlyBase G52045.1 AATCCCAGGAAGAGCAAATGGCAGCAGCAACATTTAATTAAGCGTA 64 17674050 0.917603596 2 60 34 0.9625 1.58546073 0.1 0.203125 0.3625 64 2 1 77 3R:17674023-17674068 6 alt FBtr0335027|FBtr0335026 17673730|17673730 17674823|17674823 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 17674030 17674068 3'utr alt FlyBase G39299.1 AATCCCAGGAAGAGCAAATGGCAGCAGCAACATTTAATT 45 17674050 0.999590906 2 45 18 1 1.880813592 0.184210526 0.488888889 0.697368421 45 0 0 76 3R:17674030-17674068 6 53 2345 FBgn0038535 6868.54 219.92 337.8266667 0.007716341 0.240996726 0.156885188 1 1 1 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 17674291 17674298 - 3R_17674291_17674298_- 0.598872343 0.61269146 0.605781901 0.00977165 alt FBtr0089412|FBtr0089413|FBtr0335026|FBtr0089415|FBtr0089414|FBtr0089417|FBtr0335027|FBtr0089416 17674184|17674184|17673730|17674184|17674184|17674184|17673730|17674184 17674823|17674823|17674823|17674823|17674823|17674823|17674823|17674823 3R - 17674219 17674343 3'utr alt FlyBase G52047.1 ATTTAACACATACTTTGCATGCGATTATTATTTTTGTGTTACACTTGCATTTAAAAACGCGCTTTAAACAATTGTATATGTATCTTATGTTAAGCAAATGAATTTAAAACCCAGCTACTTAAAAT 39 17674299 0.983518202 13 39 299 1 1.681241237 0.520833333 0.179487179 0.333333333 39 0 0 48 3R:17674219-17674343 8 alt FBtr0335027|FBtr0089416|FBtr0089414|FBtr0089417|FBtr0335026|FBtr0089415|FBtr0089412|FBtr0089413 17673730|17674184|17674184|17674184|17673730|17674184|17674184|17674184 17674823|17674823|17674823|17674823|17674823|17674823|17674823|17674823 TGCATTTA 8mer-A1 dme-miR-277-3p 3R - 17674234 17674310 3'utr alt FlyBase G39301.1 TTGTGTTACACTTGCATTTAAAAACGCGCTTTAAACAATTGTATATGTATCTTATGTTAAGCAAATGAATTTAAAAC 25 17674299 0.985353548 8 24 184 0.971428571 1.531478917 0.571428571 0.32 0.514285714 25 1 0 34 3R:17674234-17674310 8 24 2346 FBgn0038535 6868.54 219.92 337.8266667 0.003494192 0.109130593 0.071042349 1 1 1 0.2 dme-miR-2b-2-5p 7mer-A1 TGAAGAA 3R 17674567 17674573 - 3R_17674567_17674573_- 0.817814821 0.820816339 0.81931558 0.002122381 alt FBtr0089412|FBtr0089413|FBtr0335026|FBtr0089415|FBtr0089414|FBtr0089417|FBtr0335027|FBtr0089416 17674184|17674184|17673730|17674184|17674184|17674184|17673730|17674184 17674823|17674823|17674823|17674823|17674823|17674823|17674823|17674823 3R - 17674553 17674601 3'utr alt FlyBase G52051.1 TAGTAGCGAGAACCAACAATTATGAGAATGAAGAACTATGGAACGCTTT 35 17674563 0.676865933 5 34 151 0.975609756 1.602059991 0.12195122 0.142857143 0.268292683 35 1 0 40 3R:17674553-17674601 7 alt FBtr0335027|FBtr0089416|FBtr0089414|FBtr0089417|FBtr0335026|FBtr0089415|FBtr0089412|FBtr0089413 17673730|17674184|17674184|17674184|17673730|17674184|17674184|17674184 17674823|17674823|17674823|17674823|17674823|17674823|17674823|17674823 TGAAGAA 7mer-A1 dme-miR-2b-2-5p 3R - 17674552 17674597 3'utr alt FlyBase G39302.1 AGCGAGAACCAACAATTATGAGAATGAAGAACTATGGAACGCTTTA 21 17674578 0.950765909 5 19 86 0.967741935 1.477121255 0.161290323 0.285714286 0.516129032 21 1 0 30 3R:17674552-17674597 7 27 2347 FBgn0038535 6868.54 219.92 337.8266667 0.003930966 0.122771917 0.079922643 -10 5 -2.5 0.2 dme-miR-999-3p 6mer2-7 GTTAAC 3R 17688456 17688461 - 3R_17688456_17688461_- 0.784106699 0.967353607 0.875730153 0.129575126 osa FBtr0089582|FBtr0089581|FBtr0335025|FBtr0301487|FBtr0089583|FBtr0335024 17687816|17687816|17687816|17687816|17687816|17687816 17689817|17689817|17689817|17689817|17689817|17689817 3R - 17688369 17688492 3'utr osa FlyBase G52075.1 AAAAAATGAAACCCTAATGCTGTAATCTTATGTTAACTGTATTATTTGCTGGAAGTGCTGCTGCTTCGTTTTATTTTATATCGAACTTACTTAAGGCGTAAATGACAAGATAAATAATTAGGTT 45 17688475 0.978230577 17 43 376 0.924242424 1.785329835 0.242424242 0.311111111 0.53030303 45 5 0 61 3R:17688369-17688492 6 osa FBtr0089583|FBtr0335024|FBtr0335025|FBtr0301487|FBtr0089582|FBtr0089581 17687816|17687816|17687816|17687816|17687816|17687816 17689817|17689817|17689817|17689817|17689817|17689817 GTTAAC 6mer2-7 dme-miR-999-3p 3R - 17688425 17688489 3'utr osa FlyBase G39320.2 AAATGAAACCCTAATGCTGTAATCTTATGTTAACTGTATTATTTGCTGGAAGTGCTGCTGCTTCG 31 17688475 0.687210709 12 28 274 0.930232558 1.301029996 0.139534884 0.322580645 0.511627907 31 2 1 40 3R:17688425-17688489 6 19 2348 FBgn0261885 4320.86 50.56333333 77.47333333 0.004397273 0.375766366 0.245245676 14 14 14 0.2 dme-miR-305-3p 6mer3-8 ATGTGC 3R 17688989 17688994 - 3R_17688989_17688994_- 0.798396253 0.812787139 0.805591696 0.010175832 osa FBtr0089582|FBtr0089581|FBtr0335025|FBtr0301487|FBtr0089583|FBtr0335024 17687816|17687816|17687816|17687816|17687816|17687816 17689817|17689817|17689817|17689817|17689817|17689817 3R - 17688952 17689044 3'utr osa FlyBase G52079.1 GAGGATAGTTTTTAAATTCTACCACTTACTAATACCTACATATTACCACAATGTGCAGCATAGGAACTCATAAACTGATCGAACTGAACGAAC 131 17688993 0.949704923 11 129 625 0.980769231 1.707570176 0.038461538 0.167938931 0.301282051 131 1 2 153 3R:17688952-17689044 6 osa FBtr0089583|FBtr0335024|FBtr0335025|FBtr0301487|FBtr0089582|FBtr0089581 17687816|17687816|17687816|17687816|17687816|17687816 17689817|17689817|17689817|17689817|17689817|17689817 ATGTGC 6mer3-8 dme-miR-305-3p 3R - 17688952 17689014 3'utr osa FlyBase G39324.1 AATACCTACATATTACCACAATGTGCAGCATAGGAACTCATAAACTGATCGAACTGAACGAAC 84 17688992 0.811985864 7 81 385 0.971631206 2.136720567 0 0.416666667 0.65248227 84 4 0 137 3R:17688952-17689014 6 92 2349 FBgn0261885 4320.86 50.56333333 77.47333333 0.021292058 1.819500297 1.187505378 -1 -2 -1.5 0.2 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 17803390 17803397 - 3R_17803390_17803397_- 0.280376148 0.259976175 0.270176162 0.014424908 CG17802 FBtr0083526 17803223 17803529 3R - 17803344 17803417 3'utr CG17802 FlyBase G52142.1 AAATATCATAAGATATCTGACTGTGATTTGGGTGTATCGATCAGTTTTGAAAGTGGATCTTTCATCCTCTTAAA 84 17803390 0.986174666 7 82 696 0.980392157 1.698970004 0.401960784 0.214285714 0.352941176 84 1 1 100 3R:17803344-17803417 8 CG17802 FBtr0083526 17803223 17803529 CTGTGATT 8mer-m1 dme-miR-308-3p 3R - 17803375 17803417 3'utr CG17802 FlyBase G39369.1 AAATATCATAAGATATCTGACTGTGATTTGGGTGTATCGATCA 73 17803390 0.700876462 5 70 602 0.955752212 2.033423755 0.442477876 0.397260274 0.610619469 73 5 0 108 3R:17803375-17803417 8 78 2350 FBgn0038549 243.33 17.45666667 26.79 0.320552336 4.468206989 2.911534155 -7 -7 -7 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 17809699 17809705 - 3R_17809699_17809705_- 0.821861102 0.822460779 0.822160941 0.000424052 CG18012 FBtr0332430 17809399 17810834 3R - 17809681 17809745 3'utr CG18012 FlyBase G52154.1 TCAGCTGGCCGAGCAGCTGAGGATTTGGTTCGAAAATTTTCCAAAGAATCCCAGCATCCTGGAGA 19 17809707 0.8401087 7 19 94 1 1.322219295 0.238095238 0.105263158 0.19047619 19 0 0 21 3R:17809681-17809745 7 CG18012 FBtr0332430 17809399 17810834 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 17809681 17809721 3'utr CG18012 FlyBase G39379.1 TTGGTTCGAAAATTTTCCAAAGAATCCCAGCATCCTGGAGA 11 17809708 0.678133153 3 9 60 0.75 1.079181246 0.125 0.363636364 0.5625 11 4 0 12 3R:17809681-17809721 7 13 2351 FBgn0038552 964.0066667 73.48333333 112.6866667 0.013485384 0.176910864 0.115364137 2 3 2.5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 3R 17810339 17810346 - 3R_17810339_17810346_- 0.596796619 0.610173356 0.603484988 0.009458826 CG18012 FBtr0332430 17809399 17810834 3R - 17810220 17810409 5'utr CG18012 FlyBase G52158.1 AGTTCTGTATGATCGTGCGCCCGCGCAATTCCATCCCATCGACTTGACTCACAAGCACGAGCTGTACCTGAAGCTGGCCAAAGACTACCCACAGTTCCAGGCCAAGGACGCCGAACAATCCGATGTTCTGGAGGCCACCGCTCTTACCCAAAAGCTGGCCAGCGGTGTTGTGCAGTACAGACCACAGCGA 742 17810347 0.934530663 17 734 2772 0.989784336 2.639486489 0.114642452 0.150943396 0.284903519 742 8 1 872 3R:17810220-17810409 8 CG18012 FBtr0332430 17809399 17810834 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R - 17810268 17810405 5'utr CG18012 FlyBase G39381.1 CTGTATGATCGTGCGCCCGCGCAATTCCATCCCATCGACTTGACTCACAAGCACGAGCTGTACCTGAAGCTGGCCAAAGACTACCCACAGTTCCAGGCCAAGGACGCCGAACAATCCGATGTTCTGGAGGCCACCGCT 377 17810347 0.92399419 14 366 1278 0.976311337 2.460145817 0.116751269 0.395225464 0.614213198 377 13 1 577 3R:17810268-17810405 8 416 2352 FBgn0038552 964.0066667 73.48333333 112.6866667 0.431532285 5.661147653 3.691652369 1 1 1 0.2 dme-miR-184-3p 6mer2-7 CCGTCC 3R 17810744 17810749 - 3R_17810744_17810749_- 0.977598206 0.972293302 0.974945754 0.003751131 CG18012 FBtr0332430 17809399 17810834 3R - 17810708 17810799 5'utr CG18012 FlyBase G52161.1 AAGGCCTTTTGGCAGACGCTCAGTCTGCTGATGGCTCTCATCTCCATTGGCCGTCCCAGCTTCCTACTCGTCCAGAATCCGCCCGGCATTCC 63 17810752 0.97856051 10 60 427 0.961038961 1.86923172 0.025974026 0.174603175 0.324675325 63 3 0 74 3R:17810708-17810799 6 CG18012 FBtr0332430 17809399 17810834 CCGTCC 6mer2-7 dme-miR-184-3p 3R - 17810711 17810860 intron-5'utr CG18012 FlyBase G39382.1 AATCCACGAGCTAACTGCCGTCCCAGTGACGAACCTAACACCCAAACTGCGCCTGCTCTTCAAGGCCTTTTGGCAGACGCTCAGTCTGCTGATGGCTCTCATCTCCATTGGCCGTCCCAGCTTCCTACTCGTCCAGAATCCGCCCGGCAT 57 17810753 0.975184987 13 55 344 0.961038961 1.568201724 0.090909091 0.263157895 0.454545455 57 2 1 74 3R:17810711-17810860 6 43 2353 FBgn0038552 964.0066667 73.48333333 112.6866667 0.044605501 0.585166704 0.381589067 3 4 3.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 18023164 18023171 + 3R_18023164_18023171_+ 0.624241691 0.526071846 0.575156769 0.069416602 CG7785 FBtr0083539 18022826 18023689 3R + 18023135 18023210 3'utr CG7785 FlyBase G43675.1 TTTTAGTTATTCCTTTGCCATATTTCTTCTCTAGTCAAAAAGAAAAGTTCCCAAGCTGAATTCTATCTCACAACCA 15 18023159 0.988209255 8 13 134 0.866666667 1.113943352 0.333333333 0 0 15 2 0 13 3R:18023135-18023210 8 CG7785 FBtr0083539 18022826 18023689 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 18023122 18023175 3'utr CG7785 FlyBase G33013.1 ATTTTAGTTTTAGTTTTAGTTATTCCTTTGCCATATTTCTTCTCTAGTCAAAAA 7 18023158 0.992553353 5 5 70 0.727272727 0.903089987 0 0.428571429 0.636363636 7 3 0 8 3R:18023122-18023175 8 7.5 2354 FBgn0038564 104 7.253333333 11.1 0.072115385 1.034007353 0.675675676 5 6 5.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3R 18023353 18023359 + 3R_18023353_18023359_+ 0.509919147 0.451220726 0.480569937 0.041506037 CG7785 FBtr0083539 18022826 18023689 3R + 18023291 18023399 3'utr CG7785 FlyBase G43676.1 TAGTCGTAAAATGCACTGTTCTGTTCTCATTTAGACATCAGGTGTATAAACTTTGTAAACTCTCTAGTCCTTGCACTATCCAAACCGAAAGTATTTGTATAATTTTATT 71 18023361 0.828377223 10 67 581 0.914893617 0.980255942 0.234042553 0.253521127 0.436170213 71 0 8 86 3R:18023291-18023399 7 CG7785 FBtr0083539 18022826 18023689 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 18023302 18023390 3'utr CG7785 FlyBase G33014.1 TGCACTGTTCTGTTCTCATTTAGACATCAGGTGTATAAACTTTGTAAACTCTCTAGTCCTTGCACTATCCAAACCGAAAGTATTTGTAT 36 18023361 0.984854319 9 34 273 0.9375 1.051152522 0.291666667 0.25 0.4375 36 0 3 45 3R:18023302-18023390 7 45.5 2355 FBgn0038564 104 7.253333333 11.1 0.4375 6.272977941 4.099099099 -8 -8 -8 0.2 dme-miR-14-3p 6mer3-8 AAGACT 3R 18045381 18045386 - 3R_18045381_18045386_- 0.968657423 0.810147028 0.889402225 0.112083779 htl FBtr0083548|FBtr0083550|FBtr0083549 18045214|18045214|18045214 18045730|18045730|18045730 3R - 18045254 18045413 3'utr htl FlyBase G52166.1 GTATATGCGTAGTTCTAAGTTGAACTTAAGACTCGGTTGTATTTGCTGTTGTATTTCATATTGTACTGATCTTTGTAGTATTCGCAGTTTTATACTCGCTAAATTATACTCGTAGCCCATAAACATAAATGTTCTATCTTAGCGTTAGTTGCATGCCGCA 233 18045388 0.823965657 31 226 2282 0.971326165 2.432969291 0.254480287 0.158798283 0.297491039 233 8 0 271 3R:18045254-18045413 6 htl FBtr0083549|FBtr0083548|FBtr0083550 18045214|18045214|18045214 18045730|18045730|18045730 AAGACT 6mer3-8 dme-miR-14-3p 3R - 18045291 18045408 3'utr htl FlyBase G39386.1 TGCGTAGTTCTAAGTTGAACTTAAGACTCGGTTGTATTTGCTGTTGTATTTCATATTGTACTGATCTTTGTAGTATTCGCAGTTTTATACTCGCTAAATTATACTCGTAGCCCATAAA 182 18045388 0.822774116 27 168 1819 0.925795053 1.8162413 0.233215548 0.368131868 0.593639576 182 18 3 262 3R:18045291-18045408 6 84.5 2356 FBgn0010389 31.66666667 1.04 1.59 2.668421053 81.25 53.14465409 2 2 2 0.2 dme-miR-2a-2-5p 7mer-A1 GATGAGA 3R 18045707 18045713 - 3R_18045707_18045713_- 0.781296218 0.776227244 0.778761731 0.003584324 htl FBtr0083548|FBtr0083550|FBtr0083549 18045214|18045214|18045214 18045730|18045730|18045730 3R - 18045646 18045754 stop_codon htl FlyBase G52168.1 CTGCAGAAGTGGTGTAATTATTAAACGAATCAGGATCCTTAGATGAGATCAGGACAATTCAAGCCTGGTTTTTGAACCAAAGTCAAATTGTTAACTAGAGATTATGAAG 19 18045715 0.967657918 10 18 98 0.954545455 1.322219295 0.045454545 0.157894737 0.272727273 19 1 0 21 3R:18045646-18045754 7 htl FBtr0083549|FBtr0083548|FBtr0083550 18045214|18045214|18045214 18045730|18045730|18045730 GATGAGA 7mer-A1 dme-miR-2a-2-5p 3R - 18045677 18045723 3'utr htl FlyBase G39389.1 AGGATCCTTAGATGAGATCAGGACAATTCAAGCCTGGTTTTTGAACC 5 18045711 0.943060064 2 5 22 1 1 0 0.6 0.8 5 0 0 10 3R:18045677-18045723 7 4.5 2357 FBgn0010389 31.66666667 1.04 1.59 0.142105263 4.326923077 2.830188679 2 -2 0 0.2 dme-miR-184-5p 6mer3-8 TGATAA 3R 18179762 18179767 - 3R_18179762_18179767_- 0.999586368 0.983069593 0.99132798 0.011679141 cdm FBtr0083619|FBtr0336472 18179711|18179273 18179916|18179916 3R - 18179753 18179820 3'utr cdm FlyBase G52191.1 GTCAGCTCTGTAAATTGTCTCCAATTTTAACTTAAGTTCAAAAGTTCTCGACTTGATAAACTTTTATT 12 18179768 0.985539527 8 11 87 0.933333333 0.84509804 0.2 0.166666667 0.333333333 12 0 1 14 3R:18179753-18179820 6 cdm FBtr0083619|FBtr0336472 18179711|18179273 18179916|18179916 TGATAA 6mer3-8 dme-miR-184-5p 3R - 18179756 18179786 3'utr cdm FlyBase G39406.1 AGTTCAAAAGTTCTCGACTTGATAAACTTTT 6 18179768 0.733099961 3 5 41 1 0.954242509 0.111111111 0.5 0.666666667 6 0 0 9 3R:18179756-18179786 6 7 2358 FBgn0261532 596.8733333 20.49333333 31.33 0.011727781 0.341574496 0.223428024 1 1 1 0.2 dme-bantam-3p 6mer3-8 TGATCT 3R 18179860 18179865 - 3R_18179860_18179865_- 0.997243162 0.994838507 0.996040834 0.00170038 cdm FBtr0083619|FBtr0336472 18179711|18179273 18179916|18179916 3R - 18179851 18179899 3'utr cdm FlyBase G52192.1 AGTGGCCAAATGACATCTTTATCCATCCGGATTTTGATCTAGTTTCTAT 11 18179880 0.767583024 8 10 101 0.928571429 1.113943352 0.071428571 0.181818182 0.357142857 11 1 0 13 3R:18179851-18179899 6 cdm FBtr0083619|FBtr0336472 18179711|18179273 18179916|18179916 TGATCT 6mer3-8 dme-bantam-3p 3R - 18179837 18179927 stop_codon cdm FlyBase G39407.1 AGTTCCAGTGAAATGAGTGTATGCAATAAGTGGCCAAATGACATCTTTATCCATCCGGATTTTGATCTAGTTTCTATAATTGTATTTAGTT 11 18179865 0.993141179 7 9 108 0.846153846 1.041392685 0.076923077 0.090909091 0.230769231 11 2 0 11 3R:18179837-18179927 6 5.5 2359 FBgn0261532 596.8733333 20.49333333 31.33 0.009214685 0.268379961 0.17555059 15 0 7.5 0.2 dme-miR-8-3p 6mer2-7 AGTATT 3R 18192595 18192600 - 3R_18192595_18192600_- 0.999408339 0.999976676 0.999692508 0.000401919 Ssdp FBtr0330051|FBtr0083612 18192492|18192492 18194983|18195175 3R - 18192573 18192653 3'utr Ssdp FlyBase G52208.1 AATGAAGGGAATACAAAACAAAAAACCGATTGAATATGGAATATGTTTAAATAAGTATTTTAGTGTTAATTATACAATTTA 22 18192594 0.987054277 7 22 191 1 1.397940009 0.28 0.136363636 0.24 22 0 0 25 3R:18192573-18192653 6 Ssdp FBtr0330051|FBtr0083612 18192492|18192492 18194983|18195175 AGTATT 6mer2-7 dme-miR-8-3p 3R - 18192580 18192609 3'utr Ssdp FlyBase G39418.1 GTTTAAATAAGTATTTTAGTGTTAATTATA 7 18192594 0.632720012 4 7 72 1 0.954242509 0.222222222 0.285714286 0.444444444 7 0 0 9 3R:18192580-18192609 6 10.5 2360 FBgn0011481 1276.61 30.31666667 46.89333333 0.008224908 0.346344145 0.223912425 -6 -6 -6 0.2 dme-miR-276a-3p 7mer-m8 AGTTCCT 3R 18193769 18193775 - 3R_18193769_18193775_- 0.630758155 0.6287298 0.629743978 0.001434295 Ssdp FBtr0330051|FBtr0083612 18192492|18192492 18194983|18195175 3R - 18193722 18193803 3'utr Ssdp FlyBase G52215.1 AAACAACTAAAATGAAAATCGTTATTTAAGTTCCTTCCAAACGGCGAGCAATAATACCATTTGTATGGCATGAGCATGAGAT 38 18193773 0.983620513 7 37 286 0.977272727 1.33243846 0.227272727 0.131578947 0.25 38 0 1 43 3R:18193722-18193803 7 Ssdp FBtr0330051|FBtr0083612 18192492|18192492 18194983|18195175 AGTTCCT 7mer-m8 dme-miR-276a-3p 3R - 18193754 18193799 3'utr Ssdp FlyBase G39422.1 AACTAAAATGAAAATCGTTATTTAAGTTCCTTCCAAACGGCGAGCA 21 18193773 0.978717758 2 21 142 1 1.505149978 0.25 0.380952381 0.59375 21 0 0 32 3R:18193754-18193799 7 28 2361 FBgn0011481 1276.61 30.31666667 46.89333333 0.021933088 0.923584387 0.597099801 -2 -2 -2 0.2 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 3R 18239827 18239834 - 3R_18239827_18239834_- 0.659389822 0.659991389 0.659690606 0.000425395 CG7156 FBtr0083606|FBtr0083607 18239418|18239418 18239891|18241598 3R - 18239771 18239871 3'utr CG7156 FlyBase G52239.2 GCTATTGAGTCCGTAAAGTATTTTCTTATTTCGTACTGTACCTGAAATCCCATTTGTGATTCCTTGCTCAGTTCTGATTGGCATTGATTTTGATTACTTTC 393 18239835 0.807096895 22 389 2966 0.992125984 2.702430536 0.035433071 0.226463104 0.401574803 393 4 0 504 3R:18239771-18239871 8 CG7156 FBtr0083606|FBtr0083607 18239418|18239418 18239891|18241598 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R - 18239706 18239877 3'utr CG7156 FlyBase G39446.1 TGCTTTGCTATTGAGTCCGTAAAGTATTTTCTTATTTCGTACTGTACCTGAAATCCCATTTGTGATTCCTTGCTCAGTTCTGATTGGCATTGATTTTGATTACTTTCAAAGAATCTGAAGTCGCTCCATAGCGATTAATTATGTTGTGAATCTGCTATATTATTTTCTATGC 265 18239835 0.983908563 21 260 2036 0.983827493 1.86332286 0.064690027 0.309433962 0.506738544 265 2 4 365 3R:18239706-18239877 8 302.5 2362 FBgn0038588 127.6666667 6.006666667 9.273333333 2.369451697 50.36071032 32.62041697 1 1 1 0.2 dme-miR-184-3p 7mer-A1 CCGTCCA 3R 18241233 18241239 - 3R_18241233_18241239_- 0.728930166 0.73524939 0.732089778 0.004468349 CG7156 FBtr0083607 18239418 18241598 3R - 18241207 18241278 5'utr CG7156 FlyBase G52244.1 GCGACTACATATATGAGGCGGCTCTAGAGTTCAGTCATGCCGTCCAAGCGGAGGTTAACCTGGAGTATGCCG 79 18241241 0.848274654 5 76 419 0.95505618 1.929418926 0.359550562 0.126582278 0.224719101 79 4 0 85 3R:18241207-18241278 7 CG7156 FBtr0083607 18239418 18241598 CCGTCCA 7mer-A1 dme-miR-184-3p 3R - 18241197 18241265 5'utr CG7156 FlyBase G39449.1 TGAGGCGGCTCTAGAGTTCAGTCATGCCGTCCAAGCGGAGGTTAACCTGGAGTATGCCGAAGCCCACGA 35 18241241 0.966857282 4 32 168 0.918367347 1.176091259 0.224489796 0.285714286 0.489795918 35 2 2 45 3R:18241197-18241265 7 54 2363 FBgn0038588 127.6666667 6.006666667 9.273333333 0.422976501 8.990011099 5.823148814 2 2 2 0.2 dme-miR-33-5p 6mer3-8 CAATGC 3R 18248433 18248438 + 3R_18248433_18248438_+ 0.976949336 0.999057503 0.98800342 0.015632858 14-3-3epsilon FBtr0083565|FBtr0083567|FBtr0083568|FBtr0083566 18248287|18248287|18248287|18248287 18248579|18248579|18250550|18250279 3R + 18248390 18248441 3'utr 14-3-3epsilon FlyBase G43729.1 CAACAACAACACGACAACAACTTCAAGAACAACAACATGGAACCAATGCGGC 11 18248427 0.797135019 3 8 8 0.928571429 1.113943352 0.142857143 0.272727273 0.428571429 11 1 0 13 3R:18248390-18248441 6 14-3-3epsilon FBtr0083566|FBtr0083568|FBtr0083567|FBtr0083565 18248287|18248287|18248287|18248287 18250279|18250550|18248579|18248579 CAATGC 6mer3-8 dme-miR-33-5p 3R + 18248415 18248445 3'utr 14-3-3epsilon FlyBase G33047.1 AGAACAACAACATGGAACCAATGCGGCAACA 6 18248427 0.597286818 2 5 5 0.875 0.84509804 0 0.333333333 0.5 6 1 0 7 3R:18248415-18248445 6 6 2364 FBgn0020238 26098.09667 2256.556667 3469.193333 0.000229902 0.002658918 0.001729509 6 6 6 0.2 dme-miR-1006-3p 6mer2-7 GAATTT 3R 18248773 18248778 + 3R_18248773_18248778_+ 0.996341588 0.585603774 0.790972681 0.290435484 14-3-3epsilon FBtr0083568|FBtr0083566 18248287|18248287 18250550|18250279 3R + 18248702 18248773 3'utr 14-3-3epsilon FlyBase G43732.2 ATTAAGTTGGCGTCGCTTCGCAATTTGGCTCCTTAACGTTAGAAAACTGCAACATCAAGTCTACTACATTTG 18 18248762 0.745611948 12 16 115 0.95 1.278753601 0.2 0.111111111 0.2 18 1 0 19 3R:18248702-18248773 1 14-3-3epsilon FBtr0083566|FBtr0083568 18248287|18248287 18250279|18250550 GAATTT 6mer2-7 dme-miR-1006-3p 3R + 18248741 18248815 3'utr 14-3-3epsilon FlyBase G33050.1 TAGAAAACTGCAACATCAAGTCTACTACATTTGAATTTTTTGCATTCGAGAAACCAAGCATTTTATTATATTTGA 7 18248758 0.991670987 6 6 55 0.875 0.84509804 0.125 0.142857143 0.25 7 1 0 7 3R:18248741-18248815 6 2.5 2365 FBgn0020238 26098.09667 2256.556667 3469.193333 9.58E-05 0.001107883 0.000720629 11 15 13 0.2 dme-miR-980-3p 6mer3-8 GGCAGC 3R 18256341 18256346 + 3R_18256341_18256346_+ 0.897078063 0.929417585 0.913247824 0.02286748 moi FBtr0299938 18256210 18257677 3R + 18256314 18256368 3'utr moi FlyBase G43740.1 TTCAAAACGTTACCTGGAAAGAATTCTGGCAGCGTGAGGGGCATGAGCTGCTCGA 8 18256340 0.941656517 4 8 33 1 0.903089987 0.5 0 0 8 0 0 8 3R:18256314-18256368 6 moi FBtr0299938 18256210 18257677 GGCAGC 6mer3-8 dme-miR-980-3p 3R + 18256319 18256367 3'utr moi FlyBase G33055.1 AACGTTACCTGGAAAGAATTCTGGCAGCGTGAGGGGCATGAGCTGCTCG 6 18256340 0.930580219 2 6 26 1 0.84509804 0.857142857 0.166666667 0.285714286 6 0 0 7 3R:18256319-18256367 6 6 2366 FBgn0261019 238.14 13.89333333 21.31333333 0.025195263 0.431861804 0.281513919 1 1 1 0.2 dme-miR-34-5p 7mer-A1 ACTGCCA 3R 18256673 18256679 + 3R_18256673_18256679_+ 0.8204836 0.820043972 0.820263786 0.000310844 moi FBtr0299938 18256210 18257677 3R + 18256651 18256702 3'utr moi FlyBase G43742.1 AGAGGAGGACGAATCATACTTGACTGCCAACGACGATCCCGAGGATTGTGAC 21 18256670 0.954755784 5 20 93 0.956521739 1.041392685 0.086956522 0.095238095 0.173913043 21 0 1 22 3R:18256651-18256702 7 moi FBtr0299938 18256210 18257677 ACTGCCA 7mer-A1 dme-miR-34-5p 3R + 18256650 18256688 3'utr moi FlyBase G33056.1 AAGAGGAGGACGAATCATACTTGACTGCCAACGACGATC 9 18256670 0.939734668 3 9 36 1 1.301029996 0.3 0.555555556 0.8 9 0 0 20 3R:18256650-18256688 7 15 2367 FBgn0261019 238.14 13.89333333 21.31333333 0.062988158 1.079654511 0.703784798 3 3 3 0.2 dme-miR-8-3p 7mer-m8 CAGTATT 3R 18390505 18390511 - 3R_18390505_18390511_- 0.405509451 0.343092166 0.374300808 0.044135696 Vha100-2 FBtr0083656|FBtr0083657 18390321|18390321 18390624|18390624 3R - 18390446 18390527 3'utr Vha100-2 FlyBase G52289.1 ATTTTTTGGATATTGTCAGTATTGTGGTGCTCTTCCCACATTTTTGTATCCTCCGTTGTGTATTCCATTTGTAGTCAAAGTA 112 18390512 0.794389871 17 103 1249 0.912698413 2.06069784 0.30952381 0.098214286 0.198412698 112 11 0 115 3R:18390446-18390527 7 Vha100-2 FBtr0083657|FBtr0083656 18390321|18390321 18390624|18390624 CAGTATT 7mer-m8 dme-miR-8-3p 3R - 18390479 18390580 3'utr Vha100-2 FlyBase G39481.2 TACCCCCAGCCCGAACTATTTTGATTGTTTGTTAAATGTTTTTGTTTTGTTTAATTTTTTGGATATTGTCAGTATTGTGGTGCTCTTCCCACATTTTTGTAT 78 18390512 0.993026676 14 70 878 0.890909091 1.514104821 0.309090909 0.333333333 0.527272727 78 10 2 98 3R:18390479-18390580 7 88 2368 FBgn0028670 809.4533333 32.13666667 48.88333333 0.108715347 2.738305155 1.800204569 1 1 1 0.2 dme-miR-305-3p 6mer3-8 ATGTGC 3R 18390609 18390614 - 3R_18390609_18390614_- 0.535095983 0.562011292 0.548553637 0.019031991 Vha100-2 FBtr0083656|FBtr0083657 18390321|18390321 18390624|18390624 3R - 18390552 18390666 stop_codon Vha100-2 FlyBase G52290.1 TTCAGCTTCAAGGCCATTCTCGATGGCGAAGAGGAGGAGTAAACCCATCCAAATGTGCTCAAACTAGGGAAACGTGTATACAATTATACCCCCAGCCCGAACTATTTTGATTGTT 159 18390613 0.948550113 6 156 680 0.983050847 1.939519253 0.276836158 0.088050314 0.18079096 159 2 1 174 3R:18390552-18390666 6 Vha100-2 FBtr0083657|FBtr0083656 18390321|18390321 18390624|18390624 ATGTGC 6mer3-8 dme-miR-305-3p 3R - 18390586 18390642 stop_codon Vha100-2 FlyBase G39482.1 GGCGAAGAGGAGGAGTAAACCCATCCAAATGTGCTCAAACTAGGGAAACGTGTATAC 77 18390613 0.926793328 3 76 319 1 2.053078443 0.274336283 0.38961039 0.584070796 77 0 0 113 3R:18390586-18390642 6 113 2369 FBgn0028670 809.4533333 32.13666667 48.88333333 0.139600389 3.516232756 2.311626321 -1 -1 -1 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 3R 18400472 18400477 - 3R_18400472_18400477_- 0.999939742 0.999999946 0.999969844 4.26E-05 CG12333 FBtr0083655 18400371 18400826 3R - 18400421 18400569 3'utr CG12333 FlyBase G52310.1 TATCATTGTTATAGCATACGTATGTATATGCGTTGGGACTGGGCTAAACTCTTCGGAGTGCAGAGCTTCCGATGTCCAGACCCGATTTTATCTGTGTTTTACTACCATAATACATATTATAGACGTCTAAGGCATTAACGCTTTAGCCA 30 18400479 0.990918103 12 28 303 0.885714286 1.491361694 0.228571429 0.166666667 0.285714286 30 4 0 31 3R:18400421-18400569 6 CG12333 FBtr0083655 18400371 18400826 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 18400463 18400544 3'utr CG12333 FlyBase G39497.1 ATATGCGTTGGGACTGGGCTAAACTCTTCGGAGTGCAGAGCTTCCGATGTCCAGACCCGATTTTATCTGTGTTTTACTACCA 17 18400480 0.99169923 8 15 173 0.923076923 1.079181246 0.384615385 0.411764706 0.615384615 17 1 1 24 3R:18400463-18400544 6 16 2370 FBgn0038617 154.6666667 8.656666667 13.23 0.103448276 1.848286484 1.209372638 2 3 2.5 0.2 dme-miR-263a-5p 6mer2-7 TGCCAT 3R 18404478 18404483 + 3R_18404478_18404483_+ 0.982556446 0.965847348 0.974201897 0.011815118 koko FBtr0334146|FBtr0334148|FBtr0334149|FBtr0334147 18404444|18404444|18404444|18404444 18404726|18404726|18404726|18404726 3R + 18404416 18404491 stop_codon koko FlyBase G43770.1 AAGAACGAGGGCTTCCTGAATGCCACCTAATCGCTGAGAGAGACTGCCAAAACCATTCCTTCTGCCATCTGAACTT 7 18404471 0.963368552 5 7 38 1 1 0.2 0.285714286 0.5 7 0 0 10 3R:18404416-18404491 6 koko FBtr0334146|FBtr0334148|FBtr0334149|FBtr0334147 18404444|18404444|18404444|18404444 18404726|18404726|18404726|18404726 TGCCAT 6mer2-7 dme-miR-263a-5p 3R + 18404444 18404491 stop_codon koko FlyBase G33079.1 AATCGCTGAGAGAGACTGCCAAAACCATTCCTTCTGCCATCTGAACTT 6 18404471 0.723209429 4 6 31 1 0.954242509 0 0.5 0.666666667 6 0 0 9 3R:18404444-18404491 6 3 2371 FBgn0264816 41 4.086666667 6.296666667 0.073170732 0.734094617 0.476442562 7 7 7 0.2 dme-miR-1003-3p 7mer-A1 TGTGAGA 3R 18406767 18406773 - 3R_18406767_18406773_- 0.761158699 0.738777051 0.749967875 0.015826181 CG31122 FBtr0083653|FBtr0301432|FBtr0333831 18406629|18406629|18406062 18407464|18407881|18407881 3R - 18406751 18406794 3'utr CG31122 FlyBase G52315.1 CTGGGGGCAAAGTATCAAATTTGTGAGACGAGAGCGTCGATAGC 19 18406774 0.87305092 4 18 112 0.961538462 1.096910013 0.346153846 0.263157895 0.461538462 19 0 1 25 3R:18406751-18406794 7 CG31122 FBtr0333831|FBtr0301432|FBtr0083653 18406062|18406629|18406629 18407881|18407881|18407464 TGTGAGA 7mer-A1 dme-miR-1003-3p 3R - 18406748 18406789 3'utr CG31122 FlyBase G39502.1 GGCAAAGTATCAAATTTGTGAGACGAGAGCGTCGATAGCAAT 12 18406774 0.690453005 2 11 64 1 1.255272505 0.444444444 0.416666667 0.611111111 12 0 0 18 3R:18406748-18406789 7 15 2372 FBgn0051122 626.0666667 23.62 36.17666667 0.02395911 0.635055038 0.414631899 1 1 1 0.2 dme-miR-8-3p 7mer-A1 AGTATTA 3R 18406894 18406900 - 3R_18406894_18406900_- 0.811233766 0.803119513 0.807176639 0.005737677 CG31122 FBtr0083653|FBtr0301432|FBtr0333831 18406629|18406629|18406062 18407464|18407881|18407881 3R - 18406844 18406925 3'utr CG31122 FlyBase G52316.1 ACACACCCACAAAGCCCTCTGATTAAGTATTACTTAGCGTACGTAAGCTAACTTTAAGTTGCAACTGGCAAAAAGCAAGCCA 49 18406903 0.989206283 7 43 409 0.873015873 1.263241435 0.079365079 0.244897959 0.412698413 49 6 2 55 3R:18406844-18406925 7 CG31122 FBtr0333831|FBtr0301432|FBtr0083653 18406062|18406629|18406629 18407881|18407881|18407464 AGTATTA 7mer-A1 dme-miR-8-3p 3R - 18406865 18406988 3'utr CG31122 FlyBase G39503.1 CCAATGAATTTATACATCATCCGCACAGACGCATTAATCTAACCAGCCTAAAATCTAAATCACACACACCCACAAAGCCCTCTGATTAAGTATTACTTAGCGTACGTAAGCTAACTTTAAGTTG 35 18406903 0.985723309 12 33 260 0.96 1.681241237 0.02 0.285714286 0.5 35 2 0 48 3R:18406865-18406988 7 37 2373 FBgn0051122 626.0666667 23.62 36.17666667 0.059099137 1.566469094 1.022758684 3 3 3 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3R 18407070 18407076 - 3R_18407070_18407076_- 0.521217185 0.521217553 0.521217369 2.83E-07 CG31122 FBtr0083653|FBtr0301432|FBtr0333831 18406629|18406629|18406062 18407464|18407881|18407881 3R - 18407015 18407147 3'utr CG31122 FlyBase G52318.1 GCTGATTTTACAGACCTCTCTTATTTTATACAAACACTCCATGCTATTTATTTGTAATTGATGAAAAGATTTGTGATTTGCGCACATGATATAAAGTAAACATCGTAGAGCAAGCACTGTAATCGTAGCGTGT 109 18407077 0.845944009 16 106 824 0.977272727 1.633468456 0.431818182 0.155963303 0.303030303 109 1 2 129 3R:18407015-18407147 7 CG31122 FBtr0333831|FBtr0301432|FBtr0083653 18406062|18406629|18406629 18407881|18407881|18407464 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 18407020 18407092 3'utr CG31122 FlyBase G39504.1 AATTGATGAAAAGATTTGTGATTTGCGCACATGATATAAAGTAAACATCGTAGAGCAAGCACTGTAATCGTAG 67 18407070 0.979814043 7 67 468 1 2.004321374 0.514851485 0.402985075 0.603960396 67 0 0 101 3R:18407020-18407092 7 79 2374 FBgn0051122 626.0666667 23.62 36.17666667 0.126184645 3.344623201 2.183728001 1 -6 -2.5 0.2 dme-miR-995-5p 6mer3-8 AATTCG 3R 18407244 18407249 - 3R_18407244_18407249_- 0.644934188 0.611810099 0.628372143 0.023422276 CG31122 FBtr0083653|FBtr0301432|FBtr0333831 18406629|18406629|18406062 18407464|18407881|18407881 3R - 18407184 18407259 3'utr CG31122 FlyBase G52319.1 GCATTTTTGTAATTCGTCCCAAACTGAAAGCAAAATCTCATCAGTGCAATAATATACATAATCCGAATATATATAT 18 18407247 0.985734683 5 15 134 0.80952381 1.230448921 0.142857143 0.166666667 0.285714286 18 4 0 17 3R:18407184-18407259 6 CG31122 FBtr0333831|FBtr0301432|FBtr0083653 18406062|18406629|18406629 18407881|18407881|18407464 AATTCG 6mer3-8 dme-miR-995-5p 3R - 18407217 18407276 3'utr CG31122 FlyBase G39505.1 TTGTATCTTTGATCATCGCATTTTTGTAATTCGTCCCAAACTGAAAGCAAAATCTCATCA 13 18407247 0.987769864 5 12 109 0.9375 1.176091259 0.0625 0.153846154 0.3125 13 1 0 15 3R:18407217-18407276 6 10 2375 FBgn0051122 626.0666667 23.62 36.17666667 0.01597274 0.423370025 0.276421266 -2 -2 -2 0.2 dme-miR-965-3p 7mer-m8 TACGCTT 3R 18407474 18407480 - 3R_18407474_18407480_- 0.620204848 0.620191538 0.620198193 9.40E-06 CG31122 FBtr0301432|FBtr0333831 18406629|18406062 18407881|18407881 3R - 18407307 18407517 3'utr CG31122 FlyBase G52320.1 AGTGTCGCTCGAAACGCAAACTGCAGAAATTGTATTATACGCTTTGCCGTTAGATCTGTAGCCTAACTATATCTATGTGTACTTGTACGAGAGAAAGTTTCTTAGAACCACCAGCAGCATCAGCACTTAGCTTAAGTGGAGTCACACCTACCACGTCCTATATATATTATATGTATGTCCAGTCCCTTCGTCCCTTCATTTTTTGTACATG 77 18407474 0.986065146 27 70 615 0.917647059 1.591064607 0.129411765 0.090909091 0.176470588 77 6 1 78 3R:18407307-18407517 7 CG31122 FBtr0333831|FBtr0301432 18406062|18406629 18407881|18407881 TACGCTT 7mer-m8 dme-miR-965-3p 3R - 18407349 18407525 3'utr CG31122 FlyBase G39506.1 TCATCATCAGTGTCGCTCGAAACGCAAACTGCAGAAATTGTATTATACGCTTTGCCGTTAGATCTGTAGCCTAACTATATCTATGTGTACTTGTACGAGAGAAAGTTTCTTAGAACCACCAGCAGCATCAGCACTTAGCTTAAGTGGAGTCACACCTACCACGTCCTATATATATTA 65 18407473 0.986390105 20 61 519 0.948453608 1.662757832 0.164948454 0.384615385 0.587628866 65 4 1 92 3R:18407349-18407525 7 42.5 2376 FBgn0051122 626.0666667 23.62 36.17666667 0.067884144 1.799322608 1.174790381 -6 -7 -6.5 0.2 dme-bantam-3p 7mer-m8 TGATCTC 3R 18407706 18407712 - 3R_18407706_18407712_- 0.66142765 0.661552169 0.661489909 8.81E-05 CG31122 FBtr0301432|FBtr0333831 18406629|18406062 18407881|18407881 3R - 18407662 18407776 3'utr CG31122 FlyBase G52321.1 CAGCAGCTGCTGGCTGCCGCCCCGGAGCTCGCGCTGGCCTCCTCATCGCGCCTGGCTGCGGCCCTGATCTCGTCGGCGGTGGCTCTGAGCGCCTCGTCCGCGAGCCTTGTAAATA 105 18407704 0.975645542 9 101 639 0.962962963 2.017033339 0.287037037 0.028571429 0.055555556 105 4 0 104 3R:18407662-18407776 7 CG31122 FBtr0333831|FBtr0301432 18406062|18406629 18407881|18407881 TGATCTC 7mer-m8 dme-bantam-3p 3R - 18407685 18407741 3'utr CG31122 FlyBase G39507.1 GGCCTCCTCATCGCGCCTGGCTGCGGCCCTGATCTCGTCGGCGGTGGCTCTGAGCGC 59 18407704 0.672863931 7 57 332 0.989130435 1.959041392 0.369565217 0.305084746 0.554347826 59 1 0 91 3R:18407685-18407741 7 77.5 2377 FBgn0051122 626.0666667 23.62 36.17666667 0.123788734 3.281117697 2.142264812 -8 -8 -8 0.2 dme-miR-283-5p 8mer-m1 TGATATTT 3R 18415187 18415194 - 3R_18415187_18415194_- 0.480143223 0.496919636 0.488531429 0.011862706 fru FBtr0083644 18414271 18416776 3R - 18415174 18415210 3'utr fru FlyBase G52333.1 AATATAAAATTAAATGTGATATTTTCGGCACAAAACT 8 18415188 0.981056465 5 6 71 0.727272727 0.602059991 0 0.25 0.454545455 8 2 1 8 3R:18415174-18415210 8 fru FBtr0083644 18414271 18416776 TGATATTT 8mer-m1 dme-miR-283-5p 3R - 18415181 18415217 3'utr fru FlyBase G39515.1 AATATAAAATATAAAATTAAATGTGATATTTTCGGCA 11 18415187 0.650741089 6 11 98 1 1.176091259 0 0.272727273 0.466666667 11 0 0 15 3R:18415181-18415217 8 9.5 2378 FBgn0004652 1186.113333 24.98 38.30666667 0.008009353 0.380304243 0.247998608 -6 -7 -6.5 0.2 dme-miR-31a-5p 6mer3-8 TCTTGC 3R 18416530 18416535 - 3R_18416530_18416535_- 0.738821548 0.679120856 0.708971202 0.042214699 fru FBtr0083641|FBtr0083644 18415471|18414271 18416776|18416776 3R - 18416507 18416561 3'utr fru FlyBase G52342.1 AATCGCTGCAGTTCTAGGTGGATTTTTCTTGCATTTAGTCGTCGTCCAGTCGTGT 32 18416533 0.907746261 5 32 390 1 1.556302501 0.277777778 0.09375 0.194444444 32 0 0 36 3R:18416507-18416561 6 fru FBtr0083644|FBtr0083641 18414271|18415471 18416776|18416776 TCTTGC 6mer3-8 dme-miR-31a-5p 3R - 18416491 18416546 3'utr fru FlyBase G39525.1 AGGTGGATTTTTCTTGCATTTAGTCGTCGTCCAGTCGTGTACATTACCCACTAGCT 17 18416533 0.993504078 2 16 195 0.956521739 1.342422681 0.695652174 0.294117647 0.47826087 17 1 0 22 3R:18416491-18416546 6 23.5 2379 FBgn0004652 1186.113333 24.98 38.30666667 0.019812609 0.940752602 0.61347024 -2 -2 -2 0.2 dme-miR-79-3p 7mer-A1 AGCTTTA 3R 18416733 18416739 - 3R_18416733_18416739_- 0.823349246 0.76107776 0.792213503 0.044032529 fru FBtr0083641|FBtr0083644 18415471|18414271 18416776|18416776 3R - 18416728 18416777 stop_codon fru FlyBase G52343.1 AGGGCGTGGCCGGGGCCCAAGTGCAGCCCATCACCGCCAGCTTTACCAGC 10 18416747 0.836871863 3 10 26 1 1.079181246 0.166666667 0.2 0.333333333 10 0 0 12 3R:18416728-18416777 7 fru FBtr0083644|FBtr0083641 18414271|18415471 18416776|18416776 AGCTTTA 7mer-A1 dme-miR-79-3p 3R - 18416724 18416758 3'utr fru FlyBase G39526.1 AGTGCAGCCCATCACCGCCAGCTTTACCAGCAGCA 6 18416747 0.821158962 3 5 16 0.875 0.84509804 0 0.333333333 0.5 6 1 0 7 3R:18416724-18416758 7 5 2380 FBgn0004652 1186.113333 24.98 38.30666667 0.004215449 0.200160128 0.130525583 8 8 8 0.2 dme-miR-92b-3p 8mer-A1 GTGCAATA 3R 18419914 18419921 - 3R_18419914_18419921_- 0.55460675 0.615642361 0.585124555 0.043158687 fru FBtr0330040|FBtr0083640|FBtr0083650|FBtr0083645 18418714|18418714|18418714|18418714 18422076|18422637|18422637|18422637 3R - 18419865 18419935 3'utr fru FlyBase G52347.1 GAATCGTATCGTATGTGCAATATGACTAGTTTTCGTTTAAGGTGCAGGAGGATGGATAATGGATGATGAAT 8 18419922 0.980097056 4 8 55 1 0.954242509 0.111111111 0.125 0.222222222 8 0 0 9 3R:18419865-18419935 8 fru FBtr0083650|FBtr0083645|FBtr0083640|FBtr0330040 18418714|18418714|18418714|18418714 18422637|18422637|18422637|18422076 GTGCAATA 8mer-A1 dme-miR-92b-3p 3R - 18419893 18419931 3'utr fru FlyBase G39528.1 CGTATCGTATGTGCAATATGACTAGTTTTCGTTTAAGGT 9 18419922 0.942952494 4 9 60 1 1.255272505 0.166666667 0.555555556 0.777777778 9 0 0 18 3R:18419893-18419931 8 7.5 2381 FBgn0004652 1186.113333 24.98 38.30666667 0.006323173 0.300240192 0.195788375 1 1 1 0.2 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 3R 18419992 18419999 - 3R_18419992_18419999_- 0.621113928 0.617415762 0.619264845 0.002614952 fru FBtr0330040|FBtr0083640|FBtr0083650|FBtr0083645 18418714|18418714|18418714|18418714 18422076|18422637|18422637|18422637 3R - 18419937 18420034 3'utr fru FlyBase G52348.1 TCGAAAGAATTCTATCATTTGTGTGGTATGCAAAATGGTGCTAAATCCAAATATACTTTAAAGTATACCGAGTAGAACGAGAGGAGGCCAGTACTCCT 68 18419999 0.981125282 10 65 467 0.948051948 1.86332286 0.337662338 0.132352941 0.233766234 68 4 0 73 3R:18419937-18420034 8 fru FBtr0083650|FBtr0083645|FBtr0083640|FBtr0330040 18418714|18418714|18418714|18418714 18422637|18422637|18422637|18422076 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 3R - 18419975 18420023 3'utr fru FlyBase G39529.1 CTATCATTTGTGTGGTATGCAAAATGGTGCTAAATCCAAATATACTTTA 32 18419999 0.885883284 4 31 215 0.975 1.591064607 0.275 0.21875 0.375 32 1 0 39 3R:18419975-18420023 8 45.5 2382 FBgn0004652 1186.113333 24.98 38.30666667 0.038360584 1.821457166 1.187782805 0 0 0 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 18420163 18420169 - 3R_18420163_18420169_- 0.744034274 0.740222286 0.74212828 0.002695491 fru FBtr0330040|FBtr0330040|FBtr0330040|FBtr0083640|FBtr0083640|FBtr0083640|FBtr0083650|FBtr0083650|FBtr0083650|FBtr0083645|FBtr0083645|FBtr0083645 18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714 18422076|18422076|18422076|18422637|18422637|18422637|18422637|18422637|18422637|18422637|18422637|18422637 3R - 18420146 18420223 3'utr fru FlyBase G52350.1 ATTTTTAACGCTGTTTTGTTAAACAAAAATTTAAGAAATTTATCTATTATATGATGTGATAACTATAGTAAAACTAAA 38 18420172 0.651270559 12 30 348 0.840909091 1.568201724 0.045454545 0.105263158 0.227272727 38 7 0 37 3R:18420146-18420223 7 fru FBtr0083650|FBtr0083650|FBtr0083650|FBtr0083645|FBtr0083645|FBtr0083645|FBtr0083640|FBtr0083640|FBtr0083640|FBtr0330040|FBtr0330040|FBtr0330040 18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714 18422637|18422637|18422637|18422637|18422637|18422637|18422637|18422637|18422637|18422076|18422076|18422076 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 18420146 18420191 3'utr fru FlyBase G39531.1 AAGAAATTTATCTATTATATGATGTGATAACTATAGTAAAACTAAA 34 18420172 0.622556018 8 29 299 0.823529412 1.021189299 0 0.382352941 0.588235294 34 6 3 42 3R:18420146-18420191 7 32 2383 FBgn0004652 1186.113333 24.98 38.30666667 0.026978872 1.28102482 0.835363731 3 3 3 0.2 dme-miR-34-5p 6mer2-7 ACTGCC 3R 18420250 18420255 - 3R_18420250_18420255_- 0.504784172 0.740751219 0.622767695 0.166853866 fru FBtr0330040|FBtr0083640|FBtr0083650|FBtr0083645 18418714|18418714|18418714|18418714 18422076|18422637|18422637|18422637 3R - 18420241 18420272 3'utr fru FlyBase G52350.2 ATAATGCTACATCAAATACTGCCCCCGACTTA 24 18420256 0.806921699 4 18 118 0.8 1 0.08 0.041666667 0.08 24 4 1 20 3R:18420241-18420272 6 fru FBtr0083650|FBtr0083645|FBtr0083640|FBtr0330040 18418714|18418714|18418714|18418714 18422637|18422637|18422637|18422076 ACTGCC 6mer2-7 dme-miR-34-5p 3R - 18420238 18420311 3'utr fru FlyBase G39532.1 CTTAACATGAAATGTTTAGGAATTAAATTTACATTATTAATAATGCTACATCAAATACTGCCCCCGACTTAATG 19 18420256 0.98587592 9 15 121 0.741935484 1.361727836 0.290322581 0.421052632 0.64516129 19 8 0 23 3R:18420238-18420311 6 18.5 2384 FBgn0004652 1186.113333 24.98 38.30666667 0.01559716 0.740592474 0.482944657 1 1 1 0.2 dme-miR-12-5p 6mer2-7 ATACTC 3R 18421268 18421273 - 3R_18421268_18421273_- 0.757267253 0.652131338 0.704699295 0.074342379 fru FBtr0330040|FBtr0083640|FBtr0083650|FBtr0083645 18418714|18418714|18418714|18418714 18422076|18422637|18422637|18422637 3R - 18421256 18421288 3'utr fru FlyBase G52355.1 CCGGAAACCACTCTGATACTCTATAGGAAATGA 19 18421275 0.73834928 3 18 90 0.956521739 1.342422681 0.260869565 0.210526316 0.347826087 19 1 0 22 3R:18421256-18421288 6 fru FBtr0083650|FBtr0083645|FBtr0083640|FBtr0330040 18418714|18418714|18418714|18418714 18422637|18422637|18422637|18422076 ATACTC 6mer2-7 dme-miR-12-5p 3R - 18421256 18421292 3'utr fru FlyBase G39535.1 CCACCCGGAAACCACTCTGATACTCTATAGGAAATGA 7 18421275 0.969082126 2 6 35 0.857142857 0.77815125 0.142857143 0 0 7 1 0 6 3R:18421256-18421292 6 12.5 2385 FBgn0004652 1186.113333 24.98 38.30666667 0.010538622 0.50040032 0.326313958 2 2 2 0.2 dme-miR-12-5p 7mer-A1 ATACTCA 3R 18422039 18422045 - 3R_18422039_18422045_- 0.820731218 0.820736105 0.820733662 3.46E-06 fru FBtr0330040|FBtr0083640|FBtr0083650|FBtr0083645 18418714|18418714|18418714|18418714 18422076|18422637|18422637|18422637 3R - 18422015 18422075 3'utr fru FlyBase G52356.1 AACAGCAACAGCAGCAACAGCAACCAATTGATACTCAAAGCAAATGTAATTTAGACGAGAA 351 18422047 0.909494402 5 347 1100 0.990498812 2.620136055 0.042755344 0.179487179 0.315914489 351 4 0 417 3R:18422015-18422075 7 fru FBtr0083650|FBtr0083645|FBtr0083640|FBtr0330040 18418714|18418714|18418714|18418714 18422637|18422637|18422637|18422076 ATACTCA 7mer-A1 dme-miR-12-5p 3R - 18422022 18422072 3'utr fru FlyBase G39536.1 AGCAACAGCAGCAACAGCAACCAATTGATACTCAAAGCAAATGTAATTTAG 195 18422047 0.913703431 5 189 614 0.971061093 2.178976947 0.064308682 0.41025641 0.63022508 195 8 1 302 3R:18422022-18422072 7 271.5 2386 FBgn0004652 1186.113333 24.98 38.30666667 0.228898869 10.86869496 7.087539158 2 2 2 0.2 dme-miR-980-3p 8mer-A1 GGCAGCTA 3R 18431318 18431325 - 3R_18431318_18431325_- 0.668580313 0.668610232 0.668595273 2.11E-05 fru FBtr0083647 18431231 18431446 3R - 18431303 18431350 5'utr fru FlyBase G52369.1 AATATATTTAGTAACCTAAGAACTTGGCAGCTACTATGAACAAAAGCA 119 18431326 0.83458356 6 115 727 0.95035461 1.826074803 0.014184397 0.168067227 0.29787234 119 6 1 134 3R:18431303-18431350 8 fru FBtr0083647 18431231 18431446 GGCAGCTA 8mer-A1 dme-miR-980-3p 3R - 18431303 18431350 5'utr fru FlyBase G39543.1 AATATATTTAGTAACCTAAGAACTTGGCAGCTACTATGAACAAAAGCA 63 18431326 0.819567414 6 61 363 0.968421053 1.963787827 0.063157895 0.333333333 0.557894737 63 3 0 92 3R:18431303-18431350 8 91 2387 FBgn0004652 1186.113333 24.98 38.30666667 0.076721168 3.642914331 2.375565611 1 1 1 0.2 dme-miR-92b-3p 8mer-A1 GTGCAATA 3R 18650739 18650746 - 3R_18650739_18650746_- 0.591004021 0.628895554 0.609949787 0.026793407 CG31224 FBtr0344327|FBtr0083691|FBtr0344326 18650119|18650119|18650119 18651140|18651140|18651140 3R - 18650702 18650770 3'utr CG31224 FlyBase G52400.1 TAGTAAAATGTTATACCTAGTTCAGTGCAATATACATCGATTAAATACTATATGCCGCGATACTTTTTC 16 18650750 0.767806301 6 15 119 0.952380952 1.301029996 0.047619048 0.1875 0.380952381 16 1 0 20 3R:18650702-18650770 8 CG31224 FBtr0344326|FBtr0083691|FBtr0344327 18650119|18650119|18650119 18651140|18651140|18651140 GTGCAATA 8mer-A1 dme-miR-92b-3p 3R - 18650733 18650761 3'utr CG31224 FlyBase G39567.1 GTTATACCTAGTTCAGTGCAATATACATC 8 18650749 0.668143395 5 7 51 0.818181818 0.954242509 0.090909091 0.25 0.454545455 8 2 0 9 3R:18650733-18650761 8 9.5 2388 FBgn0051224 1247.72 20.83666667 31.93333333 0.007613888 0.455927052 0.297494781 4 3 3.5 0.2 dme-miR-7-5p 6mer2-7 TCTTCC 3R 18650839 18650844 - 3R_18650839_18650844_- 0.9984075 0.999086311 0.998746905 0.000479984 CG31224 FBtr0344327|FBtr0083691|FBtr0344326 18650119|18650119|18650119 18651140|18651140|18651140 3R - 18650782 18650875 3'utr CG31224 FlyBase G52401.1 ACGTAGCTAAATGTGAAAGTGTTCCCCATTCTCTTCCTCCGGATTCGAATCACAATTCGCGTCAACCGCTTTAATCCCGTTTAGGTTTTAGATT 22 18650842 0.985943217 9 21 182 0.958333333 1.361727836 0.291666667 0.090909091 0.166666667 22 1 0 23 3R:18650782-18650875 6 CG31224 FBtr0344326|FBtr0083691|FBtr0344327 18650119|18650119|18650119 18651140|18651140|18651140 TCTTCC 6mer2-7 dme-miR-7-5p 3R - 18650782 18650861 3'utr CG31224 FlyBase G39568.1 GAAAGTGTTCCCCATTCTCTTCCTCCGGATTCGAATCACAATTCGCGTCAACCGCTTTAATCCCGTTTAGGTTTTAGATT 10 18650844 0.982479117 8 10 79 1 1.146128036 0.071428571 0.3 0.5 10 0 0 14 3R:18650782-18650861 6 10 2389 FBgn0051224 1247.72 20.83666667 31.93333333 0.008014619 0.479923212 0.313152401 -2 0 -1 0.2 dme-miR-8-3p 7mer-A1 AGTATTA 3R 18650998 18651004 - 3R_18650998_18651004_- 0.783028388 0.664681236 0.723854812 0.083684108 CG31224 FBtr0344327|FBtr0083691|FBtr0344326 18650119|18650119|18650119 18651140|18651140|18651140 3R - 18650947 18651095 3'utr CG31224 FlyBase G52402.1 ATATAATCATTACCTAGGTAGTTGTTCATGACTCTTCTATGTGTGTACTGTGTGTGTCTGTGGTTAAAACAACAAAACAAAACAACAAATTAGTATTACCTATCGAACTATATATTTAGTTAACATATGCGATTGCCAATTCTTGTTGA 51 18651006 0.953493428 21 45 417 0.9 1.73239376 0.1 0.156862745 0.283333333 51 6 0 54 3R:18650947-18651095 7 CG31224 FBtr0344326|FBtr0083691|FBtr0344327 18650119|18650119|18650119 18651140|18651140|18651140 AGTATTA 7mer-A1 dme-miR-8-3p 3R - 18650933 18651093 3'utr CG31224 FlyBase G39569.1 ATAATCATTACCTAGGTAGTTGTTCATGACTCTTCTATGTGTGTACTGTGTGTGTCTGTGGTTAAAACAACAAAACAAAACAACAAATTAGTATTACCTATCGAACTATATATTTAGTTAACATATGCGATTGCCAATTCTTGTTGATTAAACCAACAAGA 27 18651006 0.987107022 18 25 229 0.953488372 1.612783857 0.069767442 0.37037037 0.604651163 27 2 0 41 3R:18650933-18651093 7 9 2390 FBgn0051224 1247.72 20.83666667 31.93333333 0.007213157 0.431930891 0.281837161 2 2 2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 18665277 18665283 + 3R_18665277_18665283_+ 0.801740408 0.799777148 0.800758778 0.001388263 Gos28 FBtr0083661|FBtr0083661|FBtr0083661 18665169|18665169|18665169 18665307|18665307|18665307 3R + 18665237 18665301 3'utr Gos28 FlyBase G43803.1 TTAGTTTGTTTTTTCCGACGGTATATGTGTATGATTAACTTGTGATAGCAATAAAATGTACTATA 67 18665274 0.66452229 13 61 524 0.898734177 1.374137094 0.063291139 0.164179104 0.291139241 67 6 2 71 3R:18665237-18665301 7 Gos28 FBtr0083661|FBtr0083661|FBtr0083661 18665169|18665169|18665169 18665307|18665307|18665307 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 18665251 18665302 3'utr Gos28 FlyBase G33101.1 CCGACGGTATATGTGTATGATTAACTTGTGATAGCAATAAAATGTACTATAT 32 18665276 0.671890215 8 28 253 0.888888889 0.903089987 0 0.34375 0.533333333 32 1 4 40 3R:18665251-18665302 7 44.5 2391 FBgn0044871 146.6666667 20.69333333 31.63666667 0.303409091 2.150451031 1.406595722 3 1 2 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 18674633 18674640 + 3R_18674633_18674640_+ 0.500115568 0.49968646 0.499901014 0.00030342 CG7702 FBtr0083665|FBtr0083664 18674410|18674410 18674679|18674679 3R + 18674606 18674648 3'utr CG7702 FlyBase G43809.1 TAGTGAAGCCATCGATGTTTGTGTATTGTACTTAAGATCCGCA 9 18674632 0.961283387 6 9 82 1 1.041392685 0.090909091 0.111111111 0.272727273 9 0 0 11 3R:18674606-18674648 8 CG7702 FBtr0083665|FBtr0083664 18674410|18674410 18674679|18674679 GTACTTAA 8mer-A1 dme-miR-252-5p 3R + 18674610 18674648 3'utr CG7702 FlyBase G33103.1 GAAGCCATCGATGTTTGTGTATTGTACTTAAGATCCGCA 6 18674632 0.988110251 3 5 56 1 1 0 0.333333333 0.6 6 0 0 10 3R:18674610-18674648 8 6.5 2392 FBgn0038638 520.81 26.77666667 41.05 0.012480559 0.242748662 0.158343484 1 1 1 0.2 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 18759343 18759350 - 3R_18759343_18759350_- 0.381168781 0.379741774 0.380455278 0.001009041 CG7720 FBtr0083679|FBtr0301200|FBtr0301199|FBtr0339167|FBtr0301201|FBtr0083678 18759234|18759234|18759234|18759234|18759234|18759234 18759467|18759467|18759467|18759467|18759467|18759467 3R - 18759261 18759378 3'utr CG7720 FlyBase G52513.1 AGCCAAGTGTTTCATGTCTATAAAGATGCTGTGATTTTCTGTGCGCGACTGTTGTTGAGCAATTGCTCGCGCATTTCATTCGCATGTACTTAACGCATATGTGTGTGCGTGTCAGCAT 93 18759352 0.858397016 14 89 865 0.964285714 2.033423755 0.080357143 0.193548387 0.330357143 93 4 0 108 3R:18759261-18759378 8 CG7720 FBtr0301201|FBtr0083678|FBtr0301199|FBtr0339167|FBtr0083679|FBtr0301200 18759234|18759234|18759234|18759234|18759234|18759234 18759467|18759467|18759467|18759467|18759467|18759467 CTGTGATT 8mer-m1 dme-miR-308-3p 3R - 18759324 18759374 3'utr CG7720 FlyBase G39641.1 AAGTGTTTCATGTCTATAAAGATGCTGTGATTTTCTGTGCGCGACTGTTGT 69 18759352 0.867694423 8 68 678 0.981981982 2.037426498 0.081081081 0.376811594 0.612612613 69 2 0 109 3R:18759324-18759374 8 72.5 2393 FBgn0038652 105.2733333 4.686666667 7.096666667 0.688683427 15.46941679 10.21606388 2 2 2 0.2 dme-miR-33-5p 6mer3-8 CAATGC 3R 18909107 18909112 + 3R_18909107_18909112_+ 0.998857965 0.7334762 0.866167082 0.18765327 EndoA FBtr0083698|FBtr0334522|FBtr0083699 18908375|18908375|18908375 18910348|18910755|18910348 3R + 18909097 18909136 3'utr EndoA FlyBase G43825.1 CAACCTACGCCAATGCGCTCTCTATGCAAATGTCCCTTTA 6 18909112 0.976850932 4 5 36 1 0.77815125 0 0 0 6 0 0 6 3R:18909097-18909136 6 EndoA FBtr0083699|FBtr0334522|FBtr0083698 18908375|18908375|18908375 18910348|18910755|18910348 CAATGC 6mer3-8 dme-miR-33-5p 3R + 18909097 18909134 3'utr EndoA FlyBase G33116.1 CAACCTACGCCAATGCGCTCTCTATGCAAATGTCCCTT 6 18909110 0.972798488 3 5 33 1 1 0.2 0.5 0.7 6 0 0 10 3R:18909097-18909134 6 4 2394 FBgn0038659 593.6566667 19.89333333 30.41666667 0.006737901 0.201072386 0.131506849 -5 -3 -4 0.2 dme-miR-14-3p 6mer3-8 AAGACT 3R 19045871 19045876 - 3R_19045871_19045876_- 0.998781461 0.906332432 0.952556947 0.065371386 cdi FBtr0305321|FBtr0083716 19044880|19045692 19047703|19046616 3R - 19045842 19045913 3'utr cdi FlyBase G52542.1 TTTAAATAATTACATAGACTTACCGACTTGAGGTTTTAAGACTTAAAGCCCCCTTTCCCTCGAAAATTGTAC 59 19045878 0.704452325 10 55 400 0.940298507 1.799340549 0.089552239 0.118644068 0.223880597 59 4 0 63 3R:19045842-19045913 6 cdi FBtr0305321|FBtr0083716 19044880|19045692 19047703|19046616 AAGACT 6mer3-8 dme-miR-14-3p 3R - 19045821 19045912 3'utr cdi FlyBase G39657.2 TTAAATAATTACATAGACTTACCGACTTGAGGTTTTAAGACTTAAAGCCCCCTTTCCCTCGAAAATTGTACAGATGATCCCGGATCGATTTG 32 19045859 0.771551338 12 28 179 0.906976744 1.591064607 0.069767442 0.21875 0.418604651 32 4 0 39 3R:19045821-19045912 6 26 2395 FBgn0004876 813.04 17.12 26.29666667 0.031978746 1.518691589 0.988718469 2 -17 -7.5 0.2 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 19046594 19046599 - 3R_19046594_19046599_- 0.715438194 0.642507985 0.67897309 0.051569439 cdi FBtr0305321|FBtr0083716 19044880|19045692 19047703|19046616 3R - 19046407 19046627 stop_codon cdi FlyBase G52545.1 AAGGCGGCTAGCTGTGGTGGGGACCTTGTGATGAAAACCCCGACCTGATTCATATTTAATAACTTATTTCTTCGATTCTTTGAGATTTTTATCCCCATACACGATTCCTTTATACCTGGCAGTACCACTTGATAAAAATACAAAAAATAATCGCAAATAATTTTGCCCACAAAAGTTGGTTAGTTTACGATGCCTAAAGGTTTAATTTGTAAGTAAATAGT 51 19046601 0.980927444 23 48 360 0.938461538 1.183269844 0.2 0.235294118 0.4 51 1 3 61 3R:19046407-19046627 6 cdi FBtr0305321|FBtr0083716 19044880|19045692 19047703|19046616 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R - 19046502 19046626 stop_codon cdi FlyBase G39660.1 AGGCGGCTAGCTGTGGTGGGGACCTTGTGATGAAAACCCCGACCTGATTCATATTTAATAACTTATTTCTTCGATTCTTTGAGATTTTTATCCCCATACACGATTCCTTTATACCTGGCAGTACC 32 19046602 0.823727324 13 31 227 0.978723404 1.662757832 0.404255319 0.34375 0.553191489 32 1 0 46 3R:19046502-19046626 6 14.5 2396 FBgn0004876 813.04 17.12 26.29666667 0.017834301 0.846962617 0.551400684 2 3 2.5 0.2 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 19139080 19139087 - 3R_19139080_19139087_- 0.625323746 0.62536365 0.625343698 2.83E-05 Ppcs FBtr0083752|FBtr0330044 19139052|19139052 19141595|19141415 3R - 19139068 19139108 3'utr Ppcs FlyBase G52566.1 TGTATTAAACTGGAAATGAAATAGCTTTAAATGTATAGACA 6 19139088 0.869527985 3 6 46 1 0.77815125 0.166666667 0 0 6 0 0 6 3R:19139068-19139108 8 Ppcs FBtr0083752|FBtr0330044 19139052|19139052 19141595|19141415 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R - 19139069 19139109 3'utr Ppcs FlyBase G39679.1 GTGTATTAAACTGGAAATGAAATAGCTTTAAATGTATAGAC 5 19139087 0.980026608 4 4 29 0.777777778 0.84509804 0.333333333 0.8 0.888888889 5 2 0 7 3R:19139069-19139109 8 5 2397 FBgn0261285 111.1666667 3.44 5.32 0.044977511 1.453488372 0.939849624 1 0 0.5 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 19139918 19139924 - 3R_19139918_19139924_- 0.530641703 0.520848409 0.525745056 0.006924909 Ppcs FBtr0083752|FBtr0330044 19139052|19139052 19141595|19141415 3R - 19139896 19139955 3'utr Ppcs FlyBase G52569.1 ATGTATAACTAGCCAAGTGTGCGAACAAGATGGCAGCTGCGAATGGATGGTATTTGCTTT 256 19139925 0.97985026 6 252 649 0.987341772 2.494154594 0.607594937 0.19140625 0.344936709 256 4 0 312 3R:19139896-19139955 7 Ppcs FBtr0083752|FBtr0330044 19139052|19139052 19141595|19141415 GGCAGCT 7mer-m8 dme-miR-980-3p 3R - 19139888 19139950 3'utr Ppcs FlyBase G39680.1 TAACTAGCCAAGTGTGCGAACAAGATGGCAGCTGCGAATGGATGGTATTTGCTTTTACTGGCA 201 19139925 0.983077454 7 199 451 0.993846154 2.509202522 0.593846154 0.437810945 0.652307692 201 2 0 323 3R:19139888-19139950 7 226 2398 FBgn0261285 111.1666667 3.44 5.32 2.032983508 65.69767442 42.48120301 1 1 1 0.2 dme-miR-184-3p 7mer-m8 TCCGTCC 3R 19140425 19140431 - 3R_19140425_19140431_- 0.539261502 0.538619335 0.538940418 0.000454104 Ppcs FBtr0083752|FBtr0330044 19139052|19139052 19141595|19141415 3R - 19140406 19140492 3'utr Ppcs FlyBase G52570.1 GAACCTCTGGCGAAGGGTTGGCGGTGGATTTGTATCCTCCTTTCATGGAGTTGTAACCACTTCCGTCCCGCCCGCATTTGTGGTTTA 276 19140432 0.817876031 7 274 1467 0.993650794 2.194514342 0.225396825 0.123188406 0.231746032 276 1 1 313 3R:19140406-19140492 7 Ppcs FBtr0083752|FBtr0330044 19139052|19139052 19141595|19141415 TCCGTCC 7mer-m8 dme-miR-184-3p 3R - 19140406 19140458 3'utr Ppcs FlyBase G39681.1 TCCTCCTTTCATGGAGTTGTAACCACTTCCGTCCCGCCCGCATTTGTGGTTTA 123 19140432 0.809536684 4 121 637 0.988304094 2.227886705 0.18128655 0.276422764 0.479532164 123 2 0 169 3R:19140406-19140458 7 196.5 2399 FBgn0261285 111.1666667 3.44 5.32 1.767616192 57.12209302 36.93609023 1 1 1 0.2 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3R 19140901 19140907 - 3R_19140901_19140907_- 0.536431758 0.595461854 0.565946806 0.041740584 Ppcs FBtr0083752|FBtr0330044 19139052|19139052 19141595|19141415 3R - 19140880 19140961 3'utr Ppcs FlyBase G52572.1 TAGCGACAGAGTGCATGCAATCGCAATTTGCCGGACGTTGTGTCCCTGGACAACTGGTGCTGTGTGTCAGTGGCAGGCGACG 10 19140905 0.977463626 8 10 65 1 1.041392685 0.181818182 0.1 0.181818182 10 0 0 11 3R:19140880-19140961 7 Ppcs FBtr0083752|FBtr0330044 19139052|19139052 19141595|19141415 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3R - 19140896 19140934 3'utr Ppcs FlyBase G39682.1 TTGCCGGACGTTGTGTCCCTGGACAACTGGTGCTGTGTG 5 19140904 0.918301843 4 5 35 1 0.84509804 0.428571429 0.2 0.428571429 5 0 0 7 3R:19140896-19140934 7 5 2400 FBgn0261285 111.1666667 3.44 5.32 0.044977511 1.453488372 0.939849624 -2 -3 -2.5 0.2 dme-miR-276a-3p 6mer3-8 AGTTCC 3R 19141331 19141336 - 3R_19141331_19141336_- 0.991541312 0.985862513 0.988701913 0.004015518 Ppcs FBtr0347007|FBtr0083752|FBtr0330044 19140994|19139052|19139052 19141595|19141595|19141415 3R - 19141181 19141363 3'utr Ppcs FlyBase G52573.1 TCGATTCATCCTTGCCCTTGGACTTTGAGTTCCCGCCACAATTTAGCTATCTATTTATGGTCGCGCCTCATAATTGAGGTGGCACCGCTCCATTAGTCCATTATCCTGTTGTTATTATTATTTTGGTATTAGTTAATGTATTGGCCCTATTGTTGTCCTGAGAAATGATGTCACTTGTATGTA 90 19141334 0.823114811 24 87 740 0.953703704 1.711807229 0.175925926 0.144444444 0.287037037 90 4 1 103 3R:19141181-19141363 6 Ppcs FBtr0347007|FBtr0083752|FBtr0330044 19140994|19139052|19139052 19141595|19141595|19141415 AGTTCC 6mer3-8 dme-miR-276a-3p 3R - 19141253 19141359 3'utr Ppcs FlyBase G39684.1 TTCATCCTTGCCCTTGGACTTTGAGTTCCCGCCACAATTTAGCTATCTATTTATGGTCGCGCCTCATAATTGAGGTGGCACCGCTCCATTAGTCCATTATCCTGTTG 46 19141334 0.799076176 15 44 355 0.971428571 1.531478917 0.085714286 0.391304348 0.6 46 1 1 68 3R:19141253-19141359 6 45.5 2401 FBgn0261285 111.1666667 3.44 5.32 0.409295352 13.22674419 8.552631579 -2 -2 -2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 19148727 19148734 - 3R_19148727_19148734_- 0.643892685 0.635260011 0.639576348 0.006104241 CG5835 FBtr0083751|FBtr0083751|FBtr0083751 19148630|19148630|19148630 19149037|19149037|19149037 3R - 19148654 19148757 3'utr CG5835 FlyBase G52579.1 AAGACCAATTAGTTAGTAAGTTTCTGTGATATTGTTCTAGAGATTCTTTTGTACGTCCTTGCACTAACAATACGCATAGAACCCACGTTGCTAATCGATAATAA 65 19148735 0.993584955 20 60 743 0.950617284 1.58546073 0.061728395 0.2 0.358024691 65 3 1 77 3R:19148654-19148757 8 CG5835 FBtr0083751|FBtr0083751|FBtr0083751 19148630|19148630|19148630 19149037|19149037|19149037 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 19148691 19148755 3'utr CG5835 FlyBase G39688.1 GACCAATTAGTTAGTAAGTTTCTGTGATATTGTTCTAGAGATTCTTTTGTACGTCCTTGCACTAA 47 19148735 0.660163736 11 42 567 0.893333333 1.348953548 0.093333333 0.468085106 0.666666667 47 6 2 67 3R:19148691-19148755 8 50.5 2402 FBgn0038682 101.3333333 9.206666667 14.04333333 0.498355263 5.485155684 3.596012343 1 1 1 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 3R 19154505 19154510 - 3R_19154505_19154510_- 0.999943326 0.980051742 0.989997534 0.014065485 CG11779 FBtr0083750|FBtr0335020|FBtr0083749 19154095|19154095|19154403 19155132|19155132|19155132 3R - 19154487 19154545 3'utr CG11779 FlyBase G52582.1 ATGGAATTCGCTCAGGGCGGCTTGGGCATCGTAAATTGACTGTACACACAGAATCCAAA 7 19154509 0.980416204 4 6 42 0.888888889 0.602059991 0.444444444 0.285714286 0.444444444 7 0 1 8 3R:19154487-19154545 6 CG11779 FBtr0083749|FBtr0335020|FBtr0083750 19154403|19154095|19154095 19155132|19155132|19155132 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 19154494 19154522 3'utr CG11779 FlyBase G39690.1 GGGCATCGTAAATTGACTGTACACACAGA 6 19154503 0.903547297 3 6 29 1 1.079181246 0.666666667 0.5 0.75 6 0 0 12 3R:19154494-19154522 6 5.5 2403 FBgn0038683 227.2933333 11.68666667 17.73333333 0.024197806 0.470621791 0.310150376 -1 -7 -4 0.2 dme-miR-34-5p 7mer-m8 CACTGCC 3R 19170090 19170096 + 3R_19170090_19170096_+ 0.661570712 0.659786336 0.660678524 0.001261761 sqz FBtr0083733 19169821 19170576 3R + 19170077 19170226 3'utr sqz FlyBase G43909.1 AAATCAACTCCATCACTGCCCAAAACCAATAAGAAAATCAACTGCAATCCTACAGTTTCTGTGCTATTTTCAACTGCCATATGAAAGTAATATGTAATATCTAGATCAACTCAGGATTTTAAATACGATAATTATGCACACTTTTAGATA 321 19170089 0.807926662 22 304 1125 0.95 1.579783597 0.04 0.193146417 0.3525 321 11 9 380 3R:19170077-19170226 7 sqz FBtr0083733 19169821 19170576 CACTGCC 7mer-m8 dme-miR-34-5p 3R + 19170077 19170110 3'utr sqz FlyBase G33184.1 AAATCAACTCCATCACTGCCCAAAACCAATAAGA 155 19170089 0.796445737 3 140 378 0.916666667 1.597695186 0.00462963 0.324675325 0.518518519 154 14 4 198 3R:19170077-19170110 7 206.5 2404 FBgn0010768 210.2766667 7.726666667 11.73666667 0.982039535 26.72562554 17.5944334 1 1 1 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3R 19178150 19178156 - 3R_19178150_19178156_- 0.443118353 0.442860837 0.442989595 0.000182151 CG5555 FBtr0083746|FBtr0332165 19178083|19178083 19178257|19178257 3R - 19178093 19178177 3'utr CG5555 FlyBase G52594.1 AAGGTTTATAACAGCTCTATATGTGATTTCCTTTGTATAACGAAAACCTAAGGATTAAATATAACTACTACTACGTAGAAAACCA 142 19178150 0.98510694 12 137 1194 0.962765957 1.78055732 0.053191489 0.253521127 0.436170213 142 5 2 181 3R:19178093-19178177 7 CG5555 FBtr0083746|FBtr0332165 19178083|19178083 19178257|19178257 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 19178106 19178177 3'utr CG5555 FlyBase G39700.1 AAGGTTTATAACAGCTCTATATGTGATTTCCTTTGTATAACGAAAACCTAAGGATTAAATATAACTACTACT 114 19178150 0.860162087 13 107 926 0.936781609 1.73506635 0.040229885 0.385964912 0.597701149 114 9 2 163 3R:19178106-19178177 7 94.5 2405 FBgn0038686 438.3333333 26.99 41.29333333 0.215589354 3.501296777 2.288505005 -6 -6 -6 0.2 dme-miR-317-3p 7mer-A1 GTGTTCA 3R 19405089 19405095 + 3R_19405089_19405095_+ 0.81334738 0.705079553 0.759213466 0.076556896 CG5316 FBtr0083759 19404158 19406294 3R + 19405063 19405101 3'utr CG5316 FlyBase G43918.1 CTTTCAAATTGCGTATATGATGCTCAGTGTTCAGGGATC 11 19405080 0.814293571 3 9 80 0.846153846 1.041392685 0.384615385 0.181818182 0.307692308 11 2 0 11 3R:19405063-19405101 7 CG5316 FBtr0083759 19404158 19406294 GTGTTCA 7mer-A1 dme-miR-317-3p 3R + 19405069 19405103 3'utr CG5316 FlyBase G33193.1 AATTGCGTATATGATGCTCAGTGTTCAGGGATCCA 7 19405080 0.815865428 3 7 53 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 3R:19405069-19405103 7 9 2406 FBgn0038704 1029.49 52.37666667 80.40666667 0.008742193 0.171832241 0.111931017 9 9 9 0.2 dme-miR-2a-2-5p 7mer-m1 GATGAGG 3R 19405301 19405307 + 3R_19405301_19405307_+ 0.654152248 0.821921827 0.738037037 0.118631022 CG5316 FBtr0083759 19404158 19406294 3R + 19405273 19405317 3'utr CG5316 FlyBase G43919.1 AATCCAAATGATATCTGAGACCAAACTGGATGAGGCAGAGGCAAA 11 19405303 0.921496364 3 11 21 1 1.041392685 0.363636364 0 0 11 0 0 11 3R:19405273-19405317 7 CG5316 FBtr0083759 19404158 19406294 GATGAGG 7mer-m1 dme-miR-2a-2-5p 3R + 19405272 19405318 3'utr CG5316 FlyBase G33194.1 TAATCCAAATGATATCTGAGACCAAACTGGATGAGGCAGAGGCAAAG 11 19405303 0.918799379 3 10 35 0.888888889 1.204119983 0.611111111 0.363636364 0.611111111 11 2 0 16 3R:19405272-19405318 7 8.5 2407 FBgn0038704 1029.49 52.37666667 80.40666667 0.008256515 0.162286005 0.105712627 -2 -2 -2 0.2 dme-miR-14-3p 6mer2-7 AGACTG 3R 19606384 19606389 + 3R_19606384_19606389_+ 0.729968412 0.968401551 0.849184981 0.168597733 CG7342 FBtr0304745|FBtr0083777 19606277|19606277 19606475|19606475 3R + 19606362 19606408 3'utr CG7342 FlyBase G43952.1 ACAAGCAGCGGTATCAAAAATTAGACTGTATTTGTAGAATAAGTTTT 19 19606382 0.878180842 3 17 170 0.9 1.255272505 0.35 0.052631579 0.1 19 2 0 18 3R:19606362-19606408 6 CG7342 FBtr0304745|FBtr0083777 19606277|19606277 19606475|19606475 AGACTG 6mer2-7 dme-miR-14-3p 3R + 19606351 19606406 3'utr CG7342 FlyBase G33211.1 TATTTTGTAGTACAAGCAGCGGTATCAAAAATTAGACTGTATTTGTAGAATAAGTT 10 19606382 0.988301512 3 10 90 1 1.079181246 0.083333333 0.1 0.25 10 0 0 12 3R:19606351-19606406 6 13.5 2408 FBgn0038716 2 0.116666667 0.186666667 6.75 115.7142857 72.32142857 2 2 2 0.2 dme-bantam-3p 6mer3-8 TGATCT 3R 19633731 19633736 - 3R_19633731_19633736_- 0.999997913 0.999407877 0.999702895 0.000417193 subdued FBtr0334922|FBtr0083806|FBtr0334921|FBtr0083805|FBtr0302492 19633416|19633416|19633416|19633416|19633416 19633928|19633928|19633928|19633928|19633928 3R - 19633668 19633756 3'utr subdued FlyBase G52653.1 ATTTAGGTAATCCAATTTTATGATCTGTTAATTGAAAATGATTTATTAAGTGGCTCAAACTTATATTTATGCAGCCCAAGTGAGTGCCA 21 19633735 0.990438205 6 21 213 1 1.361727836 0.043478261 0.095238095 0.173913043 21 0 0 23 3R:19633668-19633756 6 subdued FBtr0334922|FBtr0302492|FBtr0083805|FBtr0334921|FBtr0083806 19633416|19633416|19633416|19633416|19633416 19633928|19633928|19633928|19633928|19633928 TGATCT 6mer3-8 dme-bantam-3p 3R - 19633693 19633753 3'utr subdued FlyBase G39737.1 TAGGTAATCCAATTTTATGATCTGTTAATTGAAAATGATTTATTAAGTGGCTCAAACTTAT 15 19633736 0.988004308 7 13 134 0.96 1.380211242 0 0.466666667 0.68 15 1 0 24 3R:19633693-19633753 6 14.5 2409 FBgn0038721 940.6666667 28.25333333 43.49 0.0154146 0.51321378 0.333409979 -1 0 -0.5 0.2 dme-miR-276a-3p 6mer2-7 GTTCCT 3R 19633885 19633890 - 3R_19633885_19633890_- 0.99059106 0.918718987 0.954655023 0.050821249 subdued FBtr0334922|FBtr0083806|FBtr0334921|FBtr0083805|FBtr0302492 19633416|19633416|19633416|19633416|19633416 19633928|19633928|19633928|19633928|19633928 3R - 19633856 19633912 3'utr subdued FlyBase G52654.1 AGTGATTATTTGTGTTACGAATGTTCCTTTCAGTCACTTAATTAGGCCTTAGCTATG 38 19633891 0.753159584 6 36 336 0.979591837 1.681241237 0.469387755 0.210526316 0.387755102 38 1 0 48 3R:19633856-19633912 6 subdued FBtr0334922|FBtr0302492|FBtr0083805|FBtr0334921|FBtr0083806 19633416|19633416|19633416|19633416|19633416 19633928|19633928|19633928|19633928|19633928 GTTCCT 6mer2-7 dme-miR-276a-3p 3R - 19633842 19633922 3'utr subdued FlyBase G39738.1 AATCATTCAAAGTGATTATTTGTGTTACGAATGTTCCTTTCAGTCACTTAATTAGGCCTTAGCTATGACACTTTTATTATT 37 19633884 0.670737474 10 36 306 0.967213115 1.770852012 0.344262295 0.459459459 0.672131148 37 2 0 59 3R:19633842-19633922 6 30.5 2410 FBgn0038721 940.6666667 28.25333333 43.49 0.032423813 1.079518641 0.701310646 1 -6 -2.5 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 19643286 19643292 - 3R_19643286_19643292_- 0.661610412 0.661039621 0.661325017 0.000403617 Vha13 FBtr0083804|FBtr0346100 19643256|19643016 19643507|19643507 3R - 19643265 19643322 3'utr Vha13 FlyBase G52668.1 CACTCGCGCGGGATTGTATTATCATTGTTTTGTGTTCTGCCCAATACACGTTGTTGTT 11 19643294 0.987991914 10 11 112 1 1.113943352 0.076923077 0.181818182 0.307692308 11 0 0 13 3R:19643265-19643322 7 Vha13 FBtr0346100|FBtr0083804 19643016|19643256 19643507|19643507 TGTGTTC 7mer-m8 dme-miR-317-3p 3R - 19643273 19643321 3'utr Vha13 FlyBase G39753.1 ACTCGCGCGGGATTGTATTATCATTGTTTTGTGTTCTGCCCAATACACG 6 19643309 0.985991727 3 6 55 1 0.954242509 0.333333333 0.333333333 0.555555556 6 0 0 9 3R:19643273-19643321 7 5.5 2411 FBgn0026753 1193.436667 217.27 330.9333333 0.004608539 0.025314125 0.016619662 2 17 9.5 0.2 dme-miR-283-5p 8mer-A1 TGATATTA 3R 19698583 19698590 + 3R_19698583_19698590_+ 0.592167677 0.59219057 0.592179124 1.62E-05 Naam FBtr0335415 19698182 19698742 3R + 19698548 19698603 3'utr Naam FlyBase G43962.1 CTTAATGTTGTGCGCTGCACCTGTTTGAATCAAATTGATATTATATACAACCAACA 32 19698582 0.745180718 8 21 294 0.641025641 1.397940009 0.256410256 0.1875 0.333333333 32 14 0 25 3R:19698548-19698603 8 Naam FBtr0335415 19698182 19698742 TGATATTA 8mer-A1 dme-miR-283-5p 3R + 19698542 19698593 3'utr Naam FlyBase G33215.1 AGGGTTCTTAATGTTGTGCGCTGCACCTGTTTGAATCAAATTGATATTATAT 19 19698573 0.96710979 6 12 191 0.535714286 0.875061263 0.035714286 0.263157895 0.5 19 12 1 15 3R:19698542-19698593 8 24 2412 FBgn0051216 617.35 42.02 64.22 0.03887584 0.571156592 0.373715353 1 10 5.5 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 19698675 19698682 + 3R_19698675_19698682_+ 0.494317063 0.470669706 0.482493385 0.016721237 Naam FBtr0335415 19698182 19698742 3R + 19698652 19698701 3'utr Naam FlyBase G43963.1 TGCTTCAGTGAGAAATATTGTATGTACTTAAAAATGTTCAAATAAAAGTA 11 19698674 0.982829168 3 11 87 1 1.146128036 0.357142857 0.272727273 0.428571429 11 0 0 14 3R:19698652-19698701 8 Naam FBtr0335415 19698182 19698742 GTACTTAA 8mer-A1 dme-miR-252-5p 3R + 19698643 19698691 3'utr Naam FlyBase G33216.1 TAGAACAACTGCTTCAGTGAGAAATATTGTATGTACTTAAAAATGTTCA 6 19698674 0.984116513 2 6 44 1 0.903089987 0.25 0.166666667 0.375 6 0 0 8 3R:19698643-19698691 8 7.5 2413 FBgn0051216 617.35 42.02 64.22 0.0121487 0.178486435 0.116786048 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 19854208 19854215 - 3R_19854208_19854215_- 0.629841437 0.627424048 0.628632742 0.00170936 Ire1 FBtr0113248|FBtr0113248|FBtr0113248 19853906|19853906|19853906 19854439|19854439|19854439 3R - 19854037 19854369 3'utr Ire1 FlyBase G52691.1 TTAATCGTGCAATTTGTGTATATGCAACTATTCCAAAATGATTCCCAATTCAGTTCTTAGCAAAAATATTCAACGGTAAGTAAACAAATGAAACTATTTTGTATACCAAGTAAGAATAATGTAGTGTGTCTTCTGTCGAATGCACGGAATTTAACTGTGATAATTTTTGATTTTGTTCAATGCCCAAGTGCAAGTTGATCTAGACAAATAGTTCGAGTTTTATATATAGTACCTAGACTTATTGTATATTTATGCATTAGTTAAGACACACCTACCTATCCCAACACTCCTCCCATTCGTGGAGATCCTTGACAAGCGAAGTTTTTAGTTTTT 873 19854219 0.834446738 64 805 6870 0.922800718 1.898049762 0.31508079 0.213058419 0.383303411 873 74 12 1028 3R:19854037-19854369 8 Ire1 FBtr0113248|FBtr0113248|FBtr0113248 19853906|19853906|19853906 19854439|19854439|19854439 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 19854032 19854368 3'utr Ire1 FlyBase G39769.1 TAATCGTGCAATTTGTGTATATGCAACTATTCCAAAATGATTCCCAATTCAGTTCTTAGCAAAAATATTCAACGGTAAGTAAACAAATGAAACTATTTTGTATACCAAGTAAGAATAATGTAGTGTGTCTTCTGTCGAATGCACGGAATTTAACTGTGATAATTTTTGATTTTGTTCAATGCCCAAGTGCAAGTTGATCTAGACAAATAGTTCGAGTTTTATATATAGTACCTAGACTTATTGTATATTTATGCATTAGTTAAGACACACCTACCTATCCCAACACTCCTCCCATTCGTGGAGATCCTTGACAAGCGAAGTTTTTAGTTTTTATATC 625 19854219 0.942288322 59 570 4917 0.919732441 1.962211439 0.275362319 0.3248 0.529542921 625 64 8 825 3R:19854032-19854368 8 416.5 2414 FBgn0261984 824.9233333 24.51333333 37.36 0.504895404 16.99075333 11.14828694 4 4 4 0.2 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 19899195 19899202 - 3R_19899195_19899202_- 0.380638724 0.362152895 0.371395809 0.013071435 CG4538 FBtr0083855|FBtr0344261|FBtr0344262 19898827|19897370|19898542 19899595|19899291|19899595 3R - 19899155 19899230 3'utr CG4538 FlyBase G52721.1 AAAGAATGTCCTCAATCCCCAAATGCATCTGTGATTCATAAACGACGAGCAGCGCAGTCTTTTGAGCCCGAAGCAA 37 19899203 0.982723831 6 34 252 0.926829268 1.278753601 0.097560976 0.108108108 0.195121951 37 2 1 38 3R:19899155-19899230 8 CG4538 FBtr0344262|FBtr0083855|FBtr0344261 19898542|19898827|19897370 19899595|19899595|19899291 CTGTGATT 8mer-m1 dme-miR-308-3p 3R - 19899189 19899225 3'utr CG4538 FlyBase G39789.1 ATGTCCTCAATCCCCAAATGCATCTGTGATTCATAAA 22 19899203 0.802509403 2 19 147 0.878787879 1.161368002 0 0.363636364 0.575757576 22 3 1 29 3R:19899189-19899225 8 27 2415 FBgn0038745 776.53 28.94666667 44.57666667 0.034770067 0.932749885 0.605698048 1 1 1 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3R 19913530 19913536 + 3R_19913530_19913536_+ 0.520876294 0.521223431 0.521049863 0.000245437 RhoGAP92B FBtr0344352|FBtr0344351|FBtr0344353|FBtr0344354|FBtr0083821 19913083|19913083|19913083|19913083|19913083 19913730|19913730|19913730|19914272|19913730 3R + 19913341 19913548 3'utr RhoGAP92B FlyBase G44025.1 ATGTATGCATATATAGTCTTTAGTAGGCCACCATAAATCAATTGTCGAAATTCGATTTGTTAGCCCAAGCCAGCTCTCAATTGTTAATCCTTGTTTGAAAGGTTGTGATACTTCAGAAAGGTTTTGTGTTTCCTTAATTTTTTGCATTGCTCTTGAGTACGTTTTGTTAACTTCTCCAACGAAAGACATTGTGATTTCCTTTTATTAA 185 19913536 0.70833306 33 172 1511 0.934782609 1.48734042 0.156521739 0.183783784 0.343478261 185 9 6 215 3R:19913341-19913548 7 RhoGAP92B FBtr0344352|FBtr0083821|FBtr0344354|FBtr0344353|FBtr0344351 19913083|19913083|19913083|19913083|19913083 19913730|19913730|19914272|19913730|19913730 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 19913476 19913552 3'utr RhoGAP92B FlyBase G33265.2 AATTTTTTGCATTGCTCTTGAGTACGTTTTGTTAACTTCTCCAACGAAAGACATTGTGATTTCCTTTTATTAAAAGT 62 19913530 0.793786307 10 58 489 0.98 1.991226076 0.03 0.370967742 0.61 62 2 0 98 3R:19913476-19913552 7 65.5 2416 FBgn0038747 1846.786667 74.18 113.18 0.035467009 0.882987328 0.578724156 -6 0 -3 0.2 dme-miR-970-3p 8mer-A1 TCTTATGA 3R 19913878 19913885 + 3R_19913878_19913885_+ 0.630215453 0.627152319 0.628683886 0.002166009 RhoGAP92B FBtr0344354 19913083 19914272 3R + 19913850 19913890 3'utr RhoGAP92B FlyBase G44028.1 GCGCGTAGTGTATGTTAGAATGTGGATCTCTTATGAAATTG 11 19913880 0.864861084 3 11 93 1 1.079181246 0.333333333 0.090909091 0.166666667 11 0 0 12 3R:19913850-19913890 8 RhoGAP92B FBtr0344354 19913083 19914272 TCTTATGA 8mer-A1 dme-miR-970-3p 3R + 19913856 19913884 3'utr RhoGAP92B FlyBase G33268.1 AGTGTATGTTAGAATGTGGATCTCTTATG 6 19913880 0.70697278 3 6 55 1 1.041392685 0.454545455 0.666666667 0.818181818 6 0 0 11 3R:19913856-19913884 7 8.5 2417 FBgn0038747 1846.786667 74.18 113.18 0.004602589 0.114586142 0.075101608 -2 -2 -2 0.2 dme-miR-932-5p 6mer2-7 GAATTG 3R 20018957 20018962 - 3R_20018957_20018962_- 0.99294934 0.790953649 0.891951494 0.142832529 CG4433 FBtr0344139|FBtr0083843|FBtr0307345 20018267|20018580|20018580 20018985|20018985|20018985 3R - 20018895 20018981 3'utr CG4433 FlyBase G52747.1 AGGAGGAGGGCGAGCGATTGAATTGCAAAAGACAAACTACCTTCATGATCGGATGCTCCGCTCCGAGTGGCAGAGCAAGTGGTTTTT 14 20018963 0.95868457 7 13 63 0.941176471 0.903089987 0.294117647 0.214285714 0.352941176 14 0 1 16 3R:20018895-20018981 6 CG4433 FBtr0307345|FBtr0344139|FBtr0083843 20018580|20018267|20018580 20018985|20018985|20018985 GAATTG 6mer2-7 dme-miR-932-5p 3R - 20018895 20019007 stop_codon CG4433 FlyBase G39808.1 AATGCAGATACATGACAACTAACAGGAGGAGGAGGGCGAGCGATTGAATTGCAAAAGACAAACTACCTTCATGATCGGATGCTCCGCTCCGAGTGGCAGAGCAAGTGGTTTTT 14 20018963 0.982817464 7 13 48 0.904761905 1.278753601 0.047619048 0.357142857 0.571428571 14 2 0 19 3R:20018895-20019007 6 6 2418 FBgn0038763 673 36.29333333 55.97666667 0.008915305 0.165319618 0.107187519 1 1 1 0.2 dme-miR-932-5p 6mer2-7 GAATTG 3R 20301533 20301538 + 3R_20301533_20301538_+ 0.996001034 0.966232227 0.981116631 0.02104972 cic FBtr0334305 20300626 20303942 3R + 20301442 20301549 3'utr cic FlyBase G44096.1 CGCACATCTACAAGCGCTTTTAAACTGTTTGCTTTTGTTCTCAAAGTTTATGCAACACGCGAACCTTTTTAAATTGTATGTACATTTCCTTGAATTGGCTTTTTACAC 18 20301510 0.986352539 12 16 139 0.947368421 1.255272505 0.368421053 0.055555556 0.105263158 18 1 0 18 3R:20301442-20301549 6 cic FBtr0334305 20300626 20303942 GAATTG 6mer2-7 dme-miR-932-5p 3R + 20301418 20301562 3'utr cic FlyBase G33315.1 AAAACCCCCAAACTAACACCCAATCGCACATCTACAAGCGCTTTTAAACTGTTTGCTTTTGTTCTCAAAGTTTATGCAACACGCGAACCTTTTTAAATTGTATGTACATTTCCTTGAATTGGCTTTTTACACTGTTGTCTAATTG 18 20301536 0.98932963 11 16 162 1 1.361727836 0.086956522 0.277777778 0.434782609 18 0 0 23 3R:20301418-20301562 6 6.5 2419 FBgn0262582 2700.526667 30.66 46.83666667 0.002406938 0.212002609 0.138780158 23 -3 10 0.2 dme-miR-7-5p 8mer-A1 GTCTTCCA 3R 20301716 20301723 + 3R_20301716_20301723_+ 0.675345777 0.675340359 0.675343068 3.82E-06 cic FBtr0334305 20300626 20303942 3R + 20301608 20301738 3'utr cic FlyBase G44097.1 TAAATTGTAAACATACCGAAAAATAAACTCTAAAAAGAAAATAATTCAAAAAACTTATTACCGACGATTGAAAGAATACAAACCAGAGAGAGAATGAGAGAACTAACTGTCTTCCACTGTTGCTGCAATAT 384 20301702 0.928908577 21 359 1960 0.939953811 1.831443159 0.233256351 0.1171875 0.217090069 384 21 5 407 3R:20301608-20301738 8 cic FBtr0334305 20300626 20303942 GTCTTCCA 8mer-A1 dme-miR-7-5p 3R + 20301647 20301850 3'utr cic FlyBase G33316.1 AATAATTCAAAAAACTTATTACCGACGATTGAAAGAATACAAACCAGAGAGAGAATGAGAGAACTAACTGTCTTCCACTGTTGCTGCAATATACTATTTAATATTGTTTACCATTTCGGTTCGATTAAATTTAGTTGTAAATTAATGTTTTAAGTATGGACTGCATTTTATTCATATGCAAAATTCTGTTCATTGTGAGTTGTT 221 20301702 0.9341476 31 208 1341 0.93993994 1.893484346 0.243243243 0.371040724 0.582582583 221 17 3 313 3R:20301647-20301850 8 231 2420 FBgn0262582 2700.526667 30.66 46.83666667 0.08553887 7.534246575 4.932033307 14 14 14 0.2 dme-miR-1012-3p 6mer2-7 TGACTA 3R 20325113 20325118 - 3R_20325113_20325118_- 0.81625654 0.998025338 0.907140939 0.128529951 CG4360 FBtr0083899|FBtr0113252 20324272|20324272 20325628|20326217 3R - 20325067 20325192 3'utr CG4360 FlyBase G52775.1 GCTTTTCAAAGCTTTGTAAATGAATCATCGGCGTCTTTTTAAGTTTGGTTGCTGTTTTCGAATGGCAAGGAAAATGACTACAATAAATTTAGATGTGACCTACTTTGCACAATAACCTTTTATGCC 16 20325118 0.985350791 11 15 129 0.944444444 1.230448921 0.222222222 0.0625 0.166666667 16 1 0 17 3R:20325067-20325192 6 CG4360 FBtr0083899|FBtr0113252 20324272|20324272 20325628|20326217 TGACTA 6mer2-7 dme-miR-1012-3p 3R - 20325094 20325151 3'utr CG4360 FlyBase G39828.1 AGTTTGGTTGCTGTTTTCGAATGGCAAGGAAAATGACTACAATAAATTTAGATGTGAC 6 20325130 0.869581263 5 6 42 1 0.903089987 0.5 0.333333333 0.5 6 0 0 8 3R:20325094-20325151 6 4 2421 FBgn0038787 2517.203333 86.49333333 132.24 0.001589065 0.046246339 0.030248034 0 12 6 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 3R 20325438 20325443 - 3R_20325438_20325443_- 0.830789386 0.832494037 0.831641712 0.001205334 CG4360 FBtr0083899|FBtr0113252 20324272|20324272 20325628|20326217 3R - 20325408 20325465 3'utr CG4360 FlyBase G52777.1 ATATATACTCGAAAGTGTTATTTACCTGCTGTGCAGAGCGCAATTGTATGTAACTATA 54 20325445 0.975460906 7 52 445 0.984126984 1.792391689 0.253968254 0.148148148 0.26984127 54 1 0 62 3R:20325408-20325465 6 CG4360 FBtr0083899|FBtr0113252 20324272|20324272 20325628|20326217 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 3R - 20325304 20325580 3'utr CG4360 FlyBase G39829.1 AGCCAGCCAGTCAAGCAGCCATTGAGGAATAGTGCAATATGCATGCCACATAGCACATACACTTATAGATCGCATATACGGCATACGAATACGATTACATGAATACTATATTTGAATATATACTCGAAAGTGTTATTTACCTGCTGTGCAGAGCGCAATTGTATGTAACTATATCGTAGAGAGCTGATCCACATGCGTGTCCAATTGTAAATTAAGGCTAGCCGTGTTGGCATAAGCCACAGATGATATGATACAGGGTGTTTAGGCCTAAACTCTA 96 20325445 0.980148801 29 92 635 0.95890411 1.669006781 0.226027397 0.427083333 0.623287671 96 4 2 140 3R:20325304-20325580 6 49 2422 FBgn0038787 2517.203333 86.49333333 132.24 0.019466048 0.566517651 0.370538415 2 2 2 0.2 dme-miR-276a-3p 6mer2-7 GTTCCT 3R 20325694 20325699 - 3R_20325694_20325699_- 0.999798115 0.993032325 0.99641522 0.004784143 CG4360 FBtr0113252 20324272 20326217 3R - 20325674 20325719 3'utr CG4360 FlyBase G52779.1 CGGTGAAAAGCCCTACAACTGTTCCTTTTGTCCTAAACAGTTCCGG 15 20325699 0.979081807 6 13 126 0.882352941 0.698970004 0 0.133333333 0.235294118 15 0 2 15 3R:20325674-20325719 6 CG4360 FBtr0113252 20324272 20326217 GTTCCT 6mer2-7 dme-miR-276a-3p 3R - 20325673 20325711 3'utr CG4360 FlyBase G39830.1 AGCCCTACAACTGTTCCTTTTGTCCTAAACAGTTCCGGC 6 20325695 0.984407809 4 5 43 0.888888889 0.903089987 0 0.5 0.666666667 6 1 0 8 3R:20325673-20325711 6 10.5 2423 FBgn0038787 2517.203333 86.49333333 132.24 0.004171296 0.121396639 0.079401089 0 -4 -2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 20325771 20325776 - 3R_20325771_20325776_- 0.754809076 0.74325468 0.749031878 0.008170195 CG4360 FBtr0113252|FBtr0113252|FBtr0113252 20324272|20324272|20324272 20326217|20326217|20326217 3R - 20325742 20325795 3'utr CG4360 FlyBase G52780.1 AGCCCTACAAGTGCAAGATCTGTGAGGTCAACTTCCGGCAGGTGGCCACGCTGA 12 20325777 0.912384647 6 12 62 1 1.146128036 0 0.166666667 0.285714286 12 0 0 14 3R:20325742-20325795 6 CG4360 FBtr0113252|FBtr0113252|FBtr0113252 20324272|20324272|20324272 20326217|20326217|20326217 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 20325748 20325795 3'utr CG4360 FlyBase G39831.1 AGCCCTACAAGTGCAAGATCTGTGAGGTCAACTTCCGGCAGGTGGCCA 8 20325777 0.910315001 3 8 41 1 1.113943352 0.307692308 0.375 0.615384615 8 0 0 13 3R:20325748-20325795 6 10 2424 FBgn0038787 2517.203333 86.49333333 132.24 0.003972663 0.115615847 0.075620085 1 1 1 0.2 dme-miR-932-5p 6mer2-7 GAATTG 3R 20536017 20536022 - 3R_20536017_20536022_- 0.981201319 0.913591156 0.947396237 0.04780756 Stat92E FBtr0334584|FBtr0089486|FBtr0089485|FBtr0089487|FBtr0100457|FBtr0334582|FBtr0334586|FBtr0334581|FBtr0334583|FBtr0089484 20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535321|20535691|20535691 20537408|20537408|20537408|20537408|20537408|20538528|20537408|20537408|20537408|20537408 3R - 20535953 20536115 3'utr Stat92E FlyBase G52795.1 AAGCCTATGTTAAACGAAAGTGGAAAAACAATCAACGAGAGCAGCAACGCAGGGATTGATTGCTTTAATTTTAGTTATAATCTAAGTAAGATTGAATTGCTTTATGTAACCCCATCCTTTATTGGCTTCCAATGCTGAAAATGCGCAAAAATTTGAACTAATC 60 20536020 0.999984639 18 58 474 0.97260274 1.550228353 0.232876712 0.166666667 0.315068493 60 1 1 71 3R:20535953-20536115 6 Stat92E FBtr0100457|FBtr0089487|FBtr0334581|FBtr0089485|FBtr0334584|FBtr0089486|FBtr0089484|FBtr0334583|FBtr0334586|FBtr0334582 20535691|20535691|20535321|20535691|20535691|20535691|20535691|20535691|20535691|20535691 20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20538528 GAATTG 6mer2-7 dme-miR-932-5p 3R - 20535934 20536066 3'utr Stat92E FlyBase G39846.1 CAGGGATTGATTGCTTTAATTTTAGTTATAATCTAAGTAAGATTGAATTGCTTTATGTAACCCCATCCTTTATTGGCTTCCAATGCTGAAAATGCGCAAAAATTTGAACTAATCAATGTATATTTTTTTGAAA 44 20536020 0.986791595 20 42 366 0.966101695 1.45484486 0.084745763 0.272727273 0.457627119 44 1 1 57 3R:20535934-20536066 6 28.5 2425 FBgn0016917 6780.14 209.8333333 320.8166667 0.004203453 0.135822081 0.088835784 -2 -2 -2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 20536257 20536262 - 3R_20536257_20536262_- 0.999673266 0.997620583 0.998646925 0.001451478 Stat92E FBtr0334584|FBtr0334584|FBtr0334584|FBtr0089486|FBtr0089486|FBtr0089486|FBtr0089485|FBtr0089485|FBtr0089485|FBtr0089487|FBtr0089487|FBtr0089487|FBtr0100457|FBtr0100457|FBtr0100457|FBtr0334582|FBtr0334582|FBtr0334582|FBtr0334586|FBtr0334586|FBtr0334586|FBtr0334581|FBtr0334581|FBtr0334581|FBtr0334583|FBtr0334583|FBtr0334583|FBtr0089484|FBtr0089484|FBtr0089484 20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535321|20535321|20535321|20535691|20535691|20535691|20535691|20535691|20535691 20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20538528|20538528|20538528|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408 3R - 20536129 20536314 3'utr Stat92E FlyBase G52796.1 CTTTTATATATGTATACATATGATTTCAATTTGTGCACTATGACGTGTTCGTCTGTGACAAAGCATTACGTTTAGATGATACTGACAAAATAATCGGTTTAGTTAGTGAGTAACTATTTGTTGAATCTAAATTTTTGATTTTGATTTTAATTTTATGGCCTAATTTTAAAACTTTGATATACAATT 276 20536263 0.855399416 35 263 2215 0.953216374 2.212187604 0.266081871 0.202898551 0.356725146 276 15 1 326 3R:20536129-20536314 6 Stat92E FBtr0100457|FBtr0100457|FBtr0100457|FBtr0089487|FBtr0089487|FBtr0089487|FBtr0334581|FBtr0334581|FBtr0334581|FBtr0089485|FBtr0089485|FBtr0089485|FBtr0334584|FBtr0334584|FBtr0334584|FBtr0089486|FBtr0089486|FBtr0089486|FBtr0089484|FBtr0089484|FBtr0089484|FBtr0334583|FBtr0334583|FBtr0334583|FBtr0334586|FBtr0334586|FBtr0334586|FBtr0334582|FBtr0334582|FBtr0334582 20535691|20535691|20535691|20535691|20535691|20535691|20535321|20535321|20535321|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691 20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20538528|20538528|20538528 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 20536200 20536313 3'utr Stat92E FlyBase G39849.1 TTTTATATATGTATACATATGATTTCAATTTGTGCACTATGACGTGTTCGTCTGTGACAAAGCATTACGTTTAGATGATACTGACAAAATAATCGGTTTAGTTAGTGAGTAACT 150 20536263 0.812100701 24 142 1134 0.935779817 1.832508913 0.23853211 0.36 0.559633028 150 12 2 204 3R:20536200-20536313 6 127.5 2426 FBgn0016917 6780.14 209.8333333 320.8166667 0.018804921 0.607625099 0.397423243 1 1 1 0.2 dme-miR-970-3p 6mer2-7 CTTATG 3R 20536388 20536393 - 3R_20536388_20536393_- 0.794937679 0.575420276 0.685178977 0.155222242 Stat92E FBtr0334584|FBtr0089486|FBtr0089485|FBtr0089487|FBtr0100457|FBtr0334582|FBtr0334586|FBtr0334581|FBtr0334583|FBtr0089484 20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535321|20535691|20535691 20537408|20537408|20537408|20537408|20537408|20538528|20537408|20537408|20537408|20537408 3R - 20536333 20536516 3'utr Stat92E FlyBase G52797.1 AACATCAACATCAATAAGATCTAGCCGATCAATGCATGCAAATTGAGCACCTCAACACAAACACCTTCAGCTCACAGCCAGAACATTGTCTATATAATATATCGTGATTATGATTGTGTCTGACTTATGCAAAATTTAGAATTTCTGTGTTGTATAAACCTTTGGAATGTGTCCGCACGTTGTT 128 20536407 0.84850031 40 123 1037 0.95 2.181843588 0.13125 0.1796875 0.34375 128 8 0 152 3R:20536333-20536516 6 Stat92E FBtr0100457|FBtr0089487|FBtr0334581|FBtr0089485|FBtr0334584|FBtr0089486|FBtr0089484|FBtr0334583|FBtr0334586|FBtr0334582 20535691|20535691|20535321|20535691|20535691|20535691|20535691|20535691|20535691|20535691 20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20538528 CTTATG 6mer2-7 dme-miR-970-3p 3R - 20536335 20536501 3'utr Stat92E FlyBase G39850.1 AAGATCTAGCCGATCAATGCATGCAAATTGAGCACCTCAACACAAACACCTTCAGCTCACAGCCAGAACATTGTCTATATAATATATCGTGATTATGATTGTGTCTGACTTATGCAAAATTTAGAATTTCTGTGTTGTATAAACCTTTGGAATGTGTCCGCACGTTG 78 20536405 0.987633102 28 76 679 0.966386555 2.06069784 0.243697479 0.384615385 0.596638655 78 4 0 115 3R:20536335-20536501 6 29.5 2427 FBgn0016917 6780.14 209.8333333 320.8166667 0.004350943 0.140587768 0.091952829 14 12 13 0.2 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 20572792 20572797 + 3R_20572792_20572797_+ 0.868721356 0.727512606 0.798116981 0.0998497 CG5191 FBtr0345213|FBtr0083907|FBtr0083904|FBtr0083906|FBtr0083905|FBtr0083908 20572462|20572462|20572462|20572462|20572462|20572462 20573000|20573000|20573000|20573000|20573000|20573000 3R + 20572791 20572836 3'utr CG5191 FlyBase G44144.1 GAGCTGTACATCGTATTCGTATTCGTAATCGTATTATCTTTACCTA 6 20572806 0.968920589 5 6 56 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3R:20572791-20572836 6 CG5191 FBtr0083905|FBtr0083908|FBtr0083904|FBtr0083906|FBtr0345213|FBtr0083907 20572462|20572462|20572462|20572462|20572462|20572462 20573000|20573000|20573000|20573000|20573000|20573000 AGCTGT 6mer3-8 dme-miR-1008-3p 3R + 20572790 20572837 3'utr CG5191 FlyBase G33360.1 TGAGCTGTACATCGTATTCGTATTCGTAATCGTATTATCTTTACCTAT 6 20572806 0.993222152 4 5 64 0.888888889 0.903089987 0 0.5 0.666666667 6 1 0 8 3R:20572790-20572837 6 3 2428 FBgn0038803 157 7.076666667 10.67333333 0.01910828 0.423928403 0.281074329 -14 -14 -14 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 20581843 20581849 - 3R_20581843_20581849_- 0.774381315 0.792584814 0.783483064 0.012871818 CG16953 FBtr0300803|FBtr0300803|FBtr0300803 20581768|20581768|20581768 20582499|20582499|20582499 3R - 20581815 20581885 3'utr CG16953 FlyBase G52839.1 CATCACACACTTAACACGCGCGACACAAATATTCATTGTGATAGAAATAGAACAAACAGTATGTACGTTTA 98 20581850 0.684349813 9 86 609 0.868421053 1.393575203 0.289473684 0.12244898 0.245614035 98 12 3 99 3R:20581815-20581885 7 CG16953 FBtr0300803|FBtr0300803|FBtr0300803 20581768|20581768|20581768 20582499|20582499|20582499 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 20581779 20581877 3'utr CG16953 FlyBase G39887.1 ACTTAACACGCGCGACACAAATATTCATTGTGATAGAAATAGAACAAACAGTATGTACGTTTACTAAAACGAAAAGTTTGAAGAAAACCCGTATACTTA 47 20581850 0.801804783 10 44 305 0.953846154 1.315270435 0.184615385 0.319148936 0.507692308 47 1 2 62 3R:20581779-20581877 7 67 2429 FBgn0038809 1215.62 52.09333333 79.63 0.055115908 1.286153059 0.841391435 1 1 1 0.2 dme-miR-14-3p 7mer-m8 AAGACTG 3R 20582041 20582047 - 3R_20582041_20582047_- 0.670295706 0.670117092 0.670206399 0.000126289 CG16953 FBtr0300803 20581768 20582499 3R - 20582004 20582158 3'utr CG16953 FlyBase G52841.1 ACGCACACACTTGCTCATCGATGGCCAAAATGTGGAGTAACAAGCATCCATTGGACCGCAATCAGTTCCAGGATTTGGGAACGCAACTGCAGATCCCTTTGGATATTGATAAAGACTGTCTTTGTTCTAAAAGCAAAAGTAAATCTGGTTAAAAA 84 20582050 0.905696364 22 80 529 0.958762887 1.968482949 0.092783505 0.119047619 0.237113402 84 4 0 93 3R:20582004-20582158 7 CG16953 FBtr0300803 20581768 20582499 AAGACTG 7mer-m8 dme-miR-14-3p 3R - 20582025 20582096 3'utr CG16953 FlyBase G39889.1 CAGTTCCAGGATTTGGGAACGCAACTGCAGATCCCTTTGGATATTGATAAAGACTGTCTTTGTTCTAAAAGC 27 20582050 0.908371874 10 24 224 0.928571429 1.290034611 0.238095238 0.333333333 0.571428571 27 2 1 39 3R:20582025-20582096 7 25 2430 FBgn0038809 1215.62 52.09333333 79.63 0.020565637 0.479907858 0.313952028 3 3 3 0.2 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 3R 20582201 20582206 - 3R_20582201_20582206_- 0.713897268 0.763863926 0.738880597 0.035331722 CG16953 FBtr0300803|FBtr0300803 20581768|20581768 20582499|20582499 3R - 20582159 20582228 3'utr CG16953 FlyBase G52842.1 GAATCTTTTTTACGTTTCCAAATACTTATCGTCCCCTACGTTACCATTGTAATCATCTCCTTTGAACATT 10 20582202 0.989512395 7 7 80 0.714285714 1 0.142857143 0.2 0.428571429 10 4 0 10 3R:20582159-20582228 6 CG16953 FBtr0300803|FBtr0300803 20581768|20581768 20582499|20582499 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 3R - 20582172 20582238 3'utr CG16953 FlyBase G39891.1 AGAGATGATAGAATCTTTTTTACGTTTCCAAATACTTATCGTCCCCTACGTTACCATTGTAATCATC 10 20582202 0.985316298 8 9 71 0.882352941 1.176091259 0.176470588 0.5 0.705882353 10 2 0 15 3R:20582172-20582238 6 4.5 2431 FBgn0038809 1215.62 52.09333333 79.63 0.003701815 0.086383414 0.056511365 -4 -4 -4 0.2 dme-miR-8-3p 6mer2-7 AGTATT 3R 20586141 20586146 - 3R_20586141_20586146_- 0.968930713 0.999999055 0.984464884 0.021968676 2-Sep FBtr0334579|FBtr0083945 20586127|20586127 20586345|20586345 3R - 20586131 20586210 3'utr 2-Sep FlyBase G52853.1 TACACGCATATGTACGCAGGCATATAATGATTATGTATTTACAACTAACGAATAAATCGAACTTAGTATTTTAACAAAGT 19 20586140 0.757763503 10 19 129 1 1.397940009 0.04 0.315789474 0.48 19 0 0 25 3R:20586131-20586210 6 2-Sep FBtr0334579|FBtr0083945 20586127|20586127 20586345|20586345 AGTATT 6mer2-7 dme-miR-8-3p 3R - 20586135 20586170 3'utr 2-Sep FlyBase G39899.1 ACAACTAACGAATAAATCGAACTTAGTATTTTAACA 6 20586140 0.976731561 2 6 46 1 1 0.2 0.666666667 0.8 6 0 0 10 3R:20586135-20586170 6 8 2432 FBgn0014029 1104 83.25 126.7633333 0.007246377 0.096096096 0.063109732 -6 -6 -6 0.2 dme-miR-2535b-3p 7mer-A1 CGTGAGA 3R 20611137 20611143 + 3R_20611137_20611143_+ 0.624007344 0.749759847 0.686883596 0.088920446 bon FBtr0334639|FBtr0334637|FBtr0330043|FBtr0300617|FBtr0334638|FBtr0083912 20610835|20610835|20611057|20610835|20610835|20610835 20612540|20612540|20612540|20611624|20612540|20612540 3R + 20611104 20611154 3'utr bon FlyBase G44184.1 TGAGAAATCGATCCGTAGGCTTGCCCCCACAATCGTGAGACACACATACAT 11 20611139 0.938032697 3 11 42 1 1.176091259 0 0.272727273 0.466666667 11 0 0 15 3R:20611104-20611154 7 bon FBtr0334638|FBtr0083912|FBtr0330043|FBtr0300617|FBtr0334639|FBtr0334637 20610835|20610835|20611057|20610835|20610835|20610835 20612540|20612540|20612540|20611624|20612540|20612540 CGTGAGA 7mer-A1 dme-miR-2535b-3p 3R + 20611111 20611162 3'utr bon FlyBase G33384.1 TCGATCCGTAGGCTTGCCCCCACAATCGTGAGACACACATACATCTAAACAA 7 20611139 0.897487346 3 7 23 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 3R:20611111-20611162 7 7 2433 FBgn0023097 953.03 20.03333333 30.79333333 0.007344994 0.349417637 0.227321931 -2 -2 -2 0.2 dme-miR-932-5p 7mer-A1 GAATTGA 3R 20611312 20611318 + 3R_20611312_20611318_+ 0.518900139 0.6119532 0.56542667 0.065798478 bon FBtr0334639|FBtr0334637|FBtr0330043|FBtr0300617|FBtr0334638|FBtr0083912 20610835|20610835|20611057|20610835|20610835|20610835 20612540|20612540|20612540|20611624|20612540|20612540 3R + 20611273 20611440 3'utr bon FlyBase G44185.1 ACGTACAATGGAATAAATTGAATCCCCTTGGGCGATCGAGAATTGAAATGAGATATGTTTAGCTAAATTTTAAGTGTTGAATATCCATAAACATTGATATAAATATAACTATAAATATGTATACCTTTCATTAGGGATCCACTAGAGATTAAAAATAGGTGTAAGTGT 30 20611315 0.978607654 15 29 205 0.96969697 1.505149978 0.181818182 0.1 0.181818182 30 1 0 32 3R:20611273-20611440 7 bon FBtr0334638|FBtr0083912|FBtr0330043|FBtr0300617|FBtr0334639|FBtr0334637 20610835|20610835|20611057|20610835|20610835|20610835 20612540|20612540|20612540|20611624|20612540|20612540 GAATTGA 7mer-A1 dme-miR-932-5p 3R + 20611273 20611338 3'utr bon FlyBase G33386.1 ACGTACAATGGAATAAATTGAATCCCCTTGGGCGATCGAGAATTGAAATGAGATATGTTTAGCTAA 18 20611315 0.972968995 7 18 108 1 1.431363764 0.185185185 0.388888889 0.592592593 18 0 0 27 3R:20611273-20611338 7 14.5 2434 FBgn0023097 953.03 20.03333333 30.79333333 0.015214631 0.723793677 0.470881143 -3 -3 -3 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 20611535 20611541 + 3R_20611535_20611541_+ 0.801092892 0.801404848 0.80124887 0.000220547 bon FBtr0334639|FBtr0334639|FBtr0334639|FBtr0334637|FBtr0334637|FBtr0334637|FBtr0330043|FBtr0330043|FBtr0330043|FBtr0300617|FBtr0300617|FBtr0300617|FBtr0334638|FBtr0334638|FBtr0334638|FBtr0083912|FBtr0083912|FBtr0083912 20610835|20610835|20610835|20610835|20610835|20610835|20611057|20611057|20611057|20610835|20610835|20610835|20610835|20610835|20610835|20610835|20610835|20610835 20612540|20612540|20612540|20612540|20612540|20612540|20612540|20612540|20612540|20611624|20611624|20611624|20612540|20612540|20612540|20612540|20612540|20612540 3R + 20611448 20611553 3'utr bon FlyBase G44186.1 CGAGTGAAATTGACATCCTTGTTTCACCGATTTGTGTTTGGGATGGAACCCGTTCTAACCAATCTTTGTTGGAATTGTATTTACTTTTGTGATAGCGAAAAACAAT 89 20611533 0.988943185 18 82 774 0.914529915 1.330413773 0.179487179 0.213483146 0.401709402 89 6 4 107 3R:20611448-20611553 7 bon FBtr0334638|FBtr0334638|FBtr0334638|FBtr0083912|FBtr0083912|FBtr0083912|FBtr0330043|FBtr0330043|FBtr0330043|FBtr0300617|FBtr0300617|FBtr0300617|FBtr0334639|FBtr0334639|FBtr0334639|FBtr0334637|FBtr0334637|FBtr0334637 20610835|20610835|20610835|20610835|20610835|20610835|20611057|20611057|20611057|20610835|20610835|20610835|20610835|20610835|20610835|20610835|20610835|20610835 20612540|20612540|20612540|20612540|20612540|20612540|20612540|20612540|20612540|20611624|20611624|20611624|20612540|20612540|20612540|20612540|20612540|20612540 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 20611514 20611577 3'utr bon FlyBase G33387.2 TGTTGGAATTGTATTTACTTTTGTGATAGCGAAAAACAATAAGATGAACAAATTACCGTTTATT 54 20611533 0.797691555 12 49 448 0.905405405 1.224014811 0.189189189 0.296296296 0.486486486 54 4 3 67 3R:20611514-20611577 7 49.5 2435 FBgn0023097 953.03 20.03333333 30.79333333 0.051939603 2.470881864 1.607490799 2 2 2 0.2 dme-miR-305-3p 6mer3-8 ATGTGC 3R 20611711 20611716 + 3R_20611711_20611716_+ 0.643553848 0.847665657 0.745609753 0.144328909 bon FBtr0334639|FBtr0334637|FBtr0330043|FBtr0334638|FBtr0083912 20610835|20610835|20611057|20610835|20610835 20612540|20612540|20612540|20612540|20612540 3R + 20611600 20611735 3'utr bon FlyBase G44188.1 AAATTAAACAATGTGGCAAAGTTCTACCATCATTTCGAATTTGACATGTACGATATTTATTGACTATTGACCGCTAACCCCATCCATCGGTAGAATCTAATTAGGACGCTCATGTGCAGCTCCCTAAGCTCCTAAG 24 20611712 0.976847418 12 23 149 0.958333333 1.06069784 0.291666667 0 0 24 0 1 23 3R:20611600-20611735 6 bon FBtr0334638|FBtr0083912|FBtr0330043|FBtr0334639|FBtr0334637 20610835|20610835|20611057|20610835|20610835 20612540|20612540|20612540|20612540|20612540 ATGTGC 6mer3-8 dme-miR-305-3p 3R + 20611651 20611728 3'utr bon FlyBase G33388.1 GATATTTATTGACTATTGACCGCTAACCCCATCCATCGGTAGAATCTAATTAGGACGCTCATGTGCAGCTCCCTAAGC 15 20611711 0.702053639 7 12 84 0.833333333 1.301029996 0.125 0.4 0.625 15 4 0 20 3R:20611651-20611728 6 7.5 2436 FBgn0023097 953.03 20.03333333 30.79333333 0.007869637 0.37437604 0.243559212 -1 0 -0.5 0.2 dme-miR-1002-5p 7mer-m8 CTACTTA 3R 20612493 20612499 + 3R_20612493_20612499_+ 0.387301498 0.420969869 0.404135684 0.023807154 bon FBtr0334639|FBtr0334637|FBtr0330043|FBtr0334638|FBtr0083912 20610835|20610835|20611057|20610835|20610835 20612540|20612540|20612540|20612540|20612540 3R + 20612455 20612514 3'utr bon FlyBase G44191.1 TTACGATAACTAAAGATTAACCACTGTATATGAATGTACTACTTACTATCGAGTGGATTA 110 20612489 0.987030846 7 109 960 0.992592593 1.826074803 0.096296296 0.190909091 0.340740741 110 0 1 134 3R:20612455-20612514 7 bon FBtr0334638|FBtr0083912|FBtr0330043|FBtr0334639|FBtr0334637 20610835|20610835|20611057|20610835|20610835 20612540|20612540|20612540|20612540|20612540 CTACTTA 7mer-m8 dme-miR-1002-5p 3R + 20612421 20612513 3'utr bon FlyBase G33393.1 ATGGAAATTATTTTATCTGTTTTAGCCGTAAGTTTTACGATAACTAAAGATTAACCACTGTATATGAATGTACTACTTACTATCGAGTGGATT 43 20612489 0.98762028 7 43 390 1 1.806179974 0.109375 0.372093023 0.578125 43 0 0 64 3R:20612421-20612513 7 74.5 2437 FBgn0023097 953.03 20.03333333 30.79333333 0.078171726 3.718801997 2.419354839 4 4 4 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 3R 20620566 20620571 + 3R_20620566_20620571_+ 0.489617619 0.549922133 0.519769876 0.042641721 CG5466 FBtr0083913 20620354 20621269 3R + 20620531 20620588 3'utr CG5466 FlyBase G44193.1 GTTCAACACAAGACTTGATTTCACATTTTCCACATTTGACTGACCTTTAGGCATACAT 24 20620565 0.807187818 7 24 202 1 1.431363764 0.037037037 0.125 0.222222222 24 0 0 27 3R:20620531-20620588 6 CG5466 FBtr0083913 20620354 20621269 TTGACT 6mer3-8 dme-miR-1012-3p 3R + 20620525 20620588 3'utr CG5466 FlyBase G33394.1 TGCCATGTTCAACACAAGACTTGATTTCACATTTTCCACATTTGACTGACCTTTAGGCATACAT 24 20620566 0.741562548 12 22 201 0.948717949 1.267171728 0 0.375 0.615384615 24 1 1 37 3R:20620525-20620588 6 17.5 2438 FBgn0038815 41.00333333 1.706666667 2.616666667 0.42679457 10.25390625 6.687898089 1 0 0.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 20620700 20620707 + 3R_20620700_20620707_+ 0.512771847 0.475551695 0.494161771 0.026318585 CG5466 FBtr0083913|FBtr0083913|FBtr0083913 20620354|20620354|20620354 20621269|20621269|20621269 3R + 20620673 20620724 3'utr CG5466 FlyBase G44194.1 AAATTAGTTAAACAATTGGCAAAACGTCTGTGATATTTGAATTATGTTGGCA 162 20620699 0.870506695 8 154 1270 0.955665025 1.685741739 0.463054187 0.228395062 0.384236453 162 6 3 194 3R:20620673-20620724 8 CG5466 FBtr0083913|FBtr0083913|FBtr0083913 20620354|20620354|20620354 20621269|20621269|20621269 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 20620669 20620719 3'utr CG5466 FlyBase G33395.1 CGGCAAATTAGTTAAACAATTGGCAAAACGTCTGTGATATTTGAATTATGT 114 20620699 0.849975028 9 107 857 0.943037975 1.474216264 0.525316456 0.289473684 0.487341772 114 5 4 149 3R:20620669-20620719 8 136 2439 FBgn0038815 41.00333333 1.706666667 2.616666667 3.316803512 79.6875 51.97452229 1 1 1 0.2 dme-miR-14-3p 7mer-A1 AGACTGA 3R 20627229 20627235 + 3R_20627229_20627235_+ 0.823288103 0.822923204 0.823105653 0.000258023 H FBtr0083914|FBtr0083916|FBtr0083917|FBtr0083915 20626787|20626787|20626787|20626787 20628915|20627251|20628915|20627251 3R + 20627212 20627251 3'utr H FlyBase G44217.1 AAACATTTCCTTGAAACAGACTGAACCTGAATTTTTTTAG 14 20627220 0.790730145 4 12 91 0.857142857 1.079181246 0.071428571 0 0 14 2 0 12 3R:20627212-20627251 7 H FBtr0083916|FBtr0083914|FBtr0083915|FBtr0083917 20626787|20626787|20626787|20626787 20627251|20628915|20627251|20628915 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 20627216 20627246 3'utr H FlyBase G33409.1 ATTTCCTTGAAACAGACTGAACCTGAATTTT 15 20627233 0.804078651 5 14 79 0.956521739 1.342422681 0.086956522 0.4 0.608695652 15 1 0 22 3R:20627216-20627246 7 14.5 2440 FBgn0001169 717.03 17.48666667 26.88666667 0.020222306 0.829203202 0.539300769 9 -4 2.5 0.2 dme-miR-12-5p 6mer3-8 AATACT 3R 20628857 20628862 + 3R_20628857_20628862_+ 0.559954532 0.573470036 0.566712284 0.009556902 H FBtr0083914|FBtr0083917 20626787|20626787 20628915|20628915 3R + 20628837 20628880 3'utr H FlyBase G44223.1 AGGTATATATACTGCAACTGAATACTTGATGTCAATAAAAACTT 9 20628862 0.960188034 3 9 59 1 1.041392685 0.090909091 0.222222222 0.363636364 9 0 0 11 3R:20628837-20628880 6 H FBtr0083914|FBtr0083917 20626787|20626787 20628915|20628915 AATACT 6mer3-8 dme-miR-12-5p 3R + 20628837 20628879 3'utr H FlyBase G33412.1 AGGTATATATACTGCAACTGAATACTTGATGTCAATAAAAACT 10 20628862 0.733194985 2 8 64 0.75 0.954242509 0 0.2 0.333333333 10 3 0 9 3R:20628837-20628879 6 9 2441 FBgn0001169 717.03 17.48666667 26.88666667 0.012551776 0.51467785 0.334738408 -5 -5 -5 0.2 dme-miR-317-5p 6mer3-8 GTATCC 3R 20629292 20629297 - 3R_20629292_20629297_- 0.996336491 0.990799066 0.993567778 0.003915533 Pi3K92E FBtr0083941|FBtr0083940|FBtr0334643 20628970|20628970|20628970 20629746|20629746|20629746 3R - 20629260 20629359 3'utr Pi3K92E FlyBase G52869.1 ATTCATTTGTTGTTTGAACACCCCCCCGCACATGCACATTGGCGCATGAACGTGCAAAAATTGTATCCTATTATGCTATATTAATTTAAGAGACATTAAC 92 20629298 0.986139433 13 90 754 0.983193277 2.068185862 0.529411765 0.260869565 0.428571429 92 2 0 117 3R:20629260-20629359 6 Pi3K92E FBtr0334643|FBtr0083940|FBtr0083941 20628970|20628970|20628970 20629746|20629746|20629746 GTATCC 6mer3-8 dme-miR-317-5p 3R - 20629268 20629346 3'utr Pi3K92E FlyBase G39914.1 TTGAACACCCCCCCGCACATGCACATTGGCGCATGAACGTGCAAAAATTGTATCCTATTATGCTATATTAATTTAAGAG 41 20629298 0.988292215 9 36 333 0.878787879 1.286306739 0.424242424 0.414634146 0.636363636 41 6 2 58 3R:20629268-20629346 6 57.5 2442 FBgn0015279 1152.983333 31.04666667 47.44333333 0.049870625 1.852050676 1.211972177 1 1 1 0.2 dme-miR-970-3p 6mer3-8 TCTTAT 3R 20629400 20629405 - 3R_20629400_20629405_- 0.996445235 0.999854822 0.998150029 0.002410951 Pi3K92E FBtr0083941|FBtr0083940|FBtr0334643 20628970|20628970|20628970 20629746|20629746|20629746 3R - 20629364 20629413 3'utr Pi3K92E FlyBase G52870.1 CCGCCCCCTCTTATACAGTGATTTTTGATCCTAAAAATTGTTTTGTTGTC 7 20629400 0.990739511 4 7 74 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 3R:20629364-20629413 6 Pi3K92E FBtr0334643|FBtr0083940|FBtr0083941 20628970|20628970|20628970 20629746|20629746|20629746 TCTTAT 6mer3-8 dme-miR-970-3p 3R - 20629375 20629437 3'utr Pi3K92E FlyBase G39915.1 TTGTAACTGTAATCATTTATCGCCCCGCCCCCTCTTATACAGTGATTTTTGATCCTAAAAATT 9 20629390 0.983713444 6 8 69 1 1.041392685 0.272727273 0.222222222 0.363636364 9 0 0 11 3R:20629375-20629437 6 6 2443 FBgn0015279 1152.983333 31.04666667 47.44333333 0.005203891 0.193257462 0.126466662 -5 -15 -10 0.2 dme-bantam-3p 7mer-A1 GATCTCA 3R 20644139 20644145 + 3R_20644139_20644145_+ 0.823347632 0.823339465 0.823343549 5.73E-06 Lrrk FBtr0334641|FBtr0334640|FBtr0112788 20644133|20644133|20644133 20644279|20644279|20644279 3R + 20644091 20644157 stop_codon Lrrk FlyBase G44228.1 ATCACATTCATTGCCTGCTGTGGCGCGCCAAGCACTGGACCTAAATTCGATCTCATTCAAAATATTT 52 20644136 0.698673896 10 50 359 0.966101695 1.755874856 0.084745763 0.115384615 0.220338983 52 2 0 57 3R:20644091-20644157 7 Lrrk FBtr0334641|FBtr0334640|FBtr0112788 20644133|20644133|20644133 20644279|20644279|20644279 GATCTCA 7mer-A1 dme-bantam-3p 3R + 20644093 20644170 stop_codon Lrrk FlyBase G33415.1 CACATTCATTGCCTGCTGTGGCGCGCCAAGCACTGGACCTAAATTCGATCTCATTCAAAATATTTGTTGACGTATTTA 45 20644136 0.981245242 7 44 317 0.984615385 1.806179974 0.015384615 0.355555556 0.553846154 45 1 0 64 3R:20644093-20644170 7 44.5 2444 FBgn0038816 197.3233333 3.033333333 4.62 0.225518185 14.67032967 9.632034632 3 3 3 0.2 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 20757447 20757454 - 3R_20757447_20757454_- 0.625169934 0.627494671 0.626332302 0.001643882 CG31195 FBtr0302188 20757267 20758623 3R - 20757249 20757605 3'utr CG31195 FlyBase G52894.1 TGTCCGCTTTTGGTTTTGTTTCTGGAAGTCTTGCCCCCCTGAACATTCCGCAATTTATTTGTAGATCAGTACAAAGCAATGAGAAGAAATCGAATGTGTAAATTGTGCCTTAAACTGAATATTTGTAACACAACAGACTATATCAAAAACATCCGTCCAATGAGTAGTCTACTTTGTATTATGTATCTACATATCTGAATTAGTGATAAGTGCCTTGAGACAAAATCGAATAACTTTTACAACCTGCTTGAGTAGTCTAATGTCTAGAATTTAAGTGTCTTATAATTTTAAAGCAATCCATCCATATATACAATGTTCAAATATATGATTTTGTAGTAAAAACCCCATTGACTTACC 206 20757445 0.981183262 56 192 1383 0.936170213 1.643452676 0.123404255 0.126213592 0.234042553 206 11 4 220 3R:20757249-20757605 8 CG31195 FBtr0302188 20757267 20758623 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R - 20757282 20757525 3'utr CG31195 FlyBase G39936.1 GAGAAGAAATCGAATGTGTAAATTGTGCCTTAAACTGAATATTTGTAACACAACAGACTATATCAAAAACATCCGTCCAATGAGTAGTCTACTTTGTATTATGTATCTACATATCTGAATTAGTGATAAGTGCCTTGAGACAAAATCGAATAACTTTTACAACCTGCTTGAGTAGTCTAATGTCTAGAATTTAAGTGTCTTATAATTTTAAAGCAATCCATCCATATATACAATGTTCAAATAT 161 20757445 0.978751233 42 146 1002 0.91025641 1.425289616 0.145299145 0.347826087 0.551282051 161 14 7 213 3R:20757282-20757525 8 67 2445 FBgn0051195 435.6633333 13.05 19.87666667 0.153788476 5.134099617 3.370786517 -9 -9 -9 0.2 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 20758586 20758593 - 3R_20758586_20758593_- 0.621937316 0.62197779 0.621957553 2.86E-05 CG31195 FBtr0302188 20757267 20758623 3R - 20758559 20758621 3'utr CG31195 FlyBase G52896.2 ACCGCACGCCAAATAACTAACGCAAACTTCCGTCCAAACAAAACTCACATCAAATCTCTCCAC 3573 20758594 0.791587169 7 3525 11201 0.986995516 2.301227357 0.010762332 0.192835153 0.353363229 3573 37 21 4402 3R:20758559-20758621 8 CG31195 FBtr0302188 20757267 20758623 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R - 20758559 20758621 3'utr CG31195 FlyBase G39937.1 ACCGCACGCCAAATAACTAACGCAAACTTCCGTCCAAACAAAACTCACATCAAATCTCTCCAC 2319 20758594 0.786185181 10 2292 6947 0.992256637 2.776701184 0.008573009 0.385942216 0.60619469 2319 23 5 3588 3R:20758559-20758621 8 2907 2446 FBgn0051195 435.6633333 13.05 19.87666667 6.67258357 222.7586207 146.2518866 1 1 1 0.2 dme-bantam-3p 7mer-A1 GATCTCA 3R 20807973 20807979 + 3R_20807973_20807979_+ 0.816434952 0.813885235 0.815160094 0.001802981 Syp FBtr0083961|FBtr0334713|FBtr0083963|FBtr0083959 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 3R + 20807925 20807993 3'utr Syp FlyBase G44267.1 TTGGTTGAAGACCGAAGAACCCTGTCGTTTACGTTTCCGCTATTGCTAGATCTCAAGTAAAGCAAAAAG 69 20807968 0.982791842 9 65 489 0.943181818 1.919078092 0.147727273 0.217391304 0.386363636 69 5 0 83 3R:20807925-20807993 7 Syp FBtr0083963|FBtr0083959|FBtr0083961|FBtr0334713 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 GATCTCA 7mer-A1 dme-bantam-3p 3R + 20807909 20807995 3'utr Syp FlyBase G33447.1 TCGACAACAAAATTGTTTGGTTGAAGACCGAAGAACCCTGTCGTTTACGTTTCCGCTATTGCTAGATCTCAAGTAAAGCAAAAAGTT 64 20807968 0.982620701 8 60 452 0.936842105 1.949390007 0.157894737 0.375 0.578947368 64 6 0 89 3R:20807909-20807995 7 64.5 2447 FBgn0038826 3810.263333 58.4 89.27 0.016927964 1.104452055 0.722527165 5 5 5 0.2 dme-miR-92b-3p 7mer-m1 TGCAATT 3R 20808650 20808656 + 3R_20808650_20808656_+ 0.68057981 0.492088139 0.586333974 0.133283759 Syp FBtr0083961|FBtr0334713|FBtr0083963|FBtr0083959 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 3R + 20808622 20808674 3'utr Syp FlyBase G44270.1 TTTTTTGAGAGAGAGCATTTCACGCAACTGCAATTGATTGTTGCCTTCGAAAA 16 20808662 0.703037512 6 14 115 0.909090909 1.301029996 0.136363636 0.3125 0.5 16 2 0 20 3R:20808622-20808674 7 Syp FBtr0083963|FBtr0083959|FBtr0083961|FBtr0334713 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 TGCAATT 7mer-m1 dme-miR-92b-3p 3R + 20808619 20808673 3'utr Syp FlyBase G33450.1 TTTTTTTTTGAGAGAGAGCATTTCACGCAACTGCAATTGATTGTTGCCTTCGAAA 10 20808640 0.720883064 7 10 73 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 3R:20808619-20808673 7 11 2448 FBgn0038826 3810.263333 58.4 89.27 0.00288694 0.188356164 0.123221687 -12 10 -1 0.2 dme-miR-986-5p 6mer3-8 ATTCGA 3R 20808912 20808917 + 3R_20808912_20808917_+ 0.592031249 0.724509491 0.65827037 0.093676304 Syp FBtr0083961|FBtr0334713|FBtr0083963|FBtr0083959 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 3R + 20808899 20808942 3'utr Syp FlyBase G44272.1 AACGATTTGTTTAATTCGATAACTGTACTGATTTTATATTGTTT 26 20808931 0.747317201 10 26 243 1 1.531478917 0.058823529 0.230769231 0.411764706 26 0 0 34 3R:20808899-20808942 6 Syp FBtr0083963|FBtr0083959|FBtr0083961|FBtr0334713 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 ATTCGA 6mer3-8 dme-miR-986-5p 3R + 20808910 20808977 3'utr Syp FlyBase G33451.1 TAATTCGATAACTGTACTGATTTTATATTGTTTTAAATTTGTAATTTAATTTGTAAGTTTTTATTGTT 31 20808931 0.685853445 11 28 329 0.893617021 1.62324929 0 0.35483871 0.574468085 31 5 0 42 3R:20808910-20808977 6 25 2449 FBgn0038826 3810.263333 58.4 89.27 0.006561226 0.428082192 0.280049289 -19 -19 -19 0.2 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 20809721 20809726 + 3R_20809721_20809726_+ 0.797322162 0.84362033 0.820471246 0.0327377 Syp FBtr0083961|FBtr0334713|FBtr0083963|FBtr0083959 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 3R + 20809664 20809803 3'utr Syp FlyBase G44279.1 AATTGCAAACTGCGCATGGAAACTGAGCGAAAAAAATGAAAAACTTTACATGAATTGTGATGATGCAAAGGCAAGATTTAATCATAATTACTAAATCTATATATACAGTAAATATATATATCTTTCTCTATAAATATATA 110 20809718 0.979907498 14 105 744 0.966216216 1.854306042 0.398648649 0.254545455 0.445945946 110 4 1 143 3R:20809664-20809803 6 Syp FBtr0083963|FBtr0083959|FBtr0083961|FBtr0334713 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R + 20809651 20809754 3'utr Syp FlyBase G33455.1 AAGGTGGACAAAAAATTGCAAACTGCGCATGGAAACTGAGCGAAAAAAATGAAAAACTTTACATGAATTGTGATGATGCAAAGGCAAGATTTAATCATAATTAC 77 20809718 0.880452781 16 71 522 0.925233645 1.393575203 0.448598131 0.298701299 0.495327103 77 5 3 99 3R:20809651-20809754 6 82 2450 FBgn0038826 3810.263333 58.4 89.27 0.021520822 1.404109589 0.918561667 3 3 3 0.2 dme-miR-14-3p 6mer2-7 AGACTG 3R 20809865 20809870 + 3R_20809865_20809870_+ 0.996647936 0.999001347 0.997824642 0.001664105 Syp FBtr0083961|FBtr0334713|FBtr0083963|FBtr0083959 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 3R + 20809809 20809900 3'utr Syp FlyBase G44280.1 GAGTATATAATGTATATGTAGGCGTAGGAGTGTATAATCTAACTTTACTTTTAAACAGACTGCGTACGTATTAAAAATTTTTAAAATTAATT 53 20809858 0.740886318 15 51 411 0.942028986 1.511883361 0.115942029 0.188679245 0.376811594 53 3 1 65 3R:20809809-20809900 6 Syp FBtr0083963|FBtr0083959|FBtr0083961|FBtr0334713 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 AGACTG 6mer2-7 dme-miR-14-3p 3R + 20809819 20809887 3'utr Syp FlyBase G33456.1 TGTATATGTAGGCGTAGGAGTGTATAATCTAACTTTACTTTTAAACAGACTGCGTACGTATTAAAAATT 18 20809857 0.984098653 7 17 138 0.956521739 1.041392685 0.173913043 0.222222222 0.391304348 18 0 1 22 3R:20809819-20809887 6 27 2451 FBgn0038826 3810.263333 58.4 89.27 0.007086124 0.462328767 0.302453232 7 8 7.5 0.2 dme-miR-305-5p 7mer-A1 GTACAAA 3R 20819758 20819764 - 3R_20819758_20819764_- 0.684330324 0.781648944 0.732989634 0.068814642 CG17271 FBtr0083993 20819624 20820192 3R - 20819752 20819819 3'utr CG17271 FlyBase G52914.1 AAGCGCGACTTTAGAGCAGCAAAAAAAACAGACTGATTGTGTAAACGTTTGTTTTGTACAAAAAGAAA 17 20819783 0.899680616 5 15 88 0.857142857 0.954242509 0.047619048 0.235294118 0.380952381 17 2 1 18 3R:20819752-20819819 7 CG17271 FBtr0083993 20819624 20820192 GTACAAA 7mer-A1 dme-miR-305-5p 3R - 20819749 20819795 3'utr CG17271 FlyBase G39947.1 AAAACAGACTGATTGTGTAAACGTTTGTTTTGTACAAAAAGAAAATG 7 20819767 0.97681865 5 7 48 1 1.176091259 0 0.285714286 0.666666667 7 0 0 15 3R:20819749-20819795 7 4 2452 FBgn0038829 298.4266667 26.90333333 40.93666667 0.013403628 0.148680461 0.097711913 19 3 11 0.2 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3R 20820025 20820031 - 3R_20820025_20820031_- 0.806213934 0.669100013 0.737656973 0.096954168 CG17271 FBtr0083993|FBtr0083993 20819624|20819624 20820192|20820192 3R - 20819987 20820050 3'utr CG17271 FlyBase G52917.1 GATAAATTTGAATGAAATTTACTTAACATGCTGCAAGCATTCCAATCGGAGAACTTCATTGAAC 13 20820033 0.980051835 5 13 93 1 1.230448921 0.647058824 0.230769231 0.411764706 13 0 0 17 3R:20819987-20820050 7 CG17271 FBtr0083993|FBtr0083993 20819624|20819624 20820192|20820192 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3R - 20820009 20820041 3'utr CG17271 FlyBase G39950.1 GAATGAAATTTACTTAACATGCTGCAAGCATTC 7 20820033 0.865739911 2 7 48 1 1 0.6 0.285714286 0.5 7 0 0 10 3R:20820009-20820041 7 9 2453 FBgn0038829 298.4266667 26.90333333 40.93666667 0.030158163 0.334531037 0.219851804 2 2 2 0.2 dme-miR-190-5p 6mer3-8 ACATAT 3R 20839536 20839541 + 3R_20839536_20839541_+ 0.905615891 0.999973872 0.952794882 0.066721182 Synd FBtr0083966|FBtr0334724|FBtr0334725 20839396|20839396|20839396 20839856|20840118|20840118 3R + 20839511 20839550 3'utr Synd FlyBase G44297.1 AGAGTCGTTGATGAAAAATTACCATACATATGTATTAGAA 6 20839539 0.979478684 4 6 38 1 1 0 0.5 0.7 6 0 0 10 3R:20839511-20839550 6 Synd FBtr0083966|FBtr0334724|FBtr0334725 20839396|20839396|20839396 20839856|20840118|20840118 ACATAT 6mer3-8 dme-miR-190-5p 3R + 20839524 20839576 3'utr Synd FlyBase G33472.1 AAAAATTACCATACATATGTATTAGAAATTGTTATGAGCAATCGCTTGCACTA 5 20839538 0.986221132 5 5 34 1 0.698970004 0.2 0 0 5 0 0 5 3R:20839524-20839576 6 4 2454 FBgn0053094 1119.136667 61.56 93.86 0.003574184 0.064977258 0.042616663 -3 -2 -2.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3R 20929150 20929156 + 3R_20929150_20929156_+ 0.563113094 0.575112925 0.569113009 0.00848514 hdly FBtr0113257 20929000 20929213 3R + 20929131 20929179 3'utr hdly FlyBase G44316.1 TATTAAATAATAAATAACTTCTAGTCGGCTTTGCCAGTGGGGCTGGCCC 15 20929149 0.77883771 4 14 126 0.933333333 1.146128036 0.2 0 0 15 1 0 14 3R:20929131-20929179 7 hdly FBtr0113257 20929000 20929213 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 20929136 20929175 3'utr hdly FlyBase G33493.1 AATAATAAATAACTTCTAGTCGGCTTTGCCAGTGGGGCTG 10 20929149 0.975297769 2 10 80 1 1.041392685 0.272727273 0.1 0.181818182 10 0 0 11 3R:20929136-20929175 7 12.5 2455 FBgn0038842 553.6666667 45.08666667 69.06666667 0.022576761 0.277243827 0.180984556 1 1 1 0.2 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 21051692 21051698 - 3R_21051692_21051698_- 0.81302214 0.805715495 0.809368818 0.005166546 Mvl FBtr0301478|FBtr0089521|FBtr0330046|FBtr0301477 21051560|21051381|21051381|21051381 21052187|21052187|21052058|21052187 3R - 21051650 21051724 3'utr Mvl FlyBase G52955.1 AAATAGTTTAAAAGTCTAATAATAAGGCTGTGAAATTAACTGAGTGTAAATCGAACCACTTCAATTGTCTAATCG 75 21051703 0.986650727 8 62 532 0.84375 1.431363764 0.041666667 0.213333333 0.385416667 75 13 2 81 3R:21051650-21051724 7 Mvl FBtr0330046|FBtr0301477|FBtr0089521|FBtr0301478 21051381|21051381|21051381|21051560 21052058|21052187|21052187|21052187 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R - 21051679 21051724 3'utr Mvl FlyBase G39979.1 AAATAGTTTAAAAGTCTAATAATAAGGCTGTGAAATTAACTGAGTG 46 21051706 0.698837865 7 38 318 0.825396825 1.414973348 0 0.282608696 0.476190476 46 10 1 52 3R:21051679-21051724 7 59.5 2456 FBgn0011672 484.1233333 17.95 27.56 0.122902566 3.314763231 2.15892598 5 8 6.5 0.2 dme-miR-968-5p 7mer-A1 CTACTTA 3R 21051806 21051812 - 3R_21051806_21051812_- 0.48507144 0.550742756 0.517907098 0.046436692 Mvl FBtr0301478|FBtr0089521|FBtr0330046|FBtr0301477 21051560|21051381|21051381|21051381 21052187|21052187|21052058|21052187 3R - 21051788 21051883 3'utr Mvl FlyBase G52956.1 AGGACCTGGGATCAGTGTAACACAATAACTAAATTCTAATTGAAAAGCGTACCAAAAACGGTTCATAAACTCTACTTACTGAGAAGCGCGAAGAGA 15 21051808 0.952626043 7 15 62 1 1.255272505 0.166666667 0.2 0.333333333 15 0 0 18 3R:21051788-21051883 7 Mvl FBtr0330046|FBtr0301477|FBtr0089521|FBtr0301478 21051381|21051381|21051381|21051560 21052058|21052187|21052187|21052187 CTACTTA 7mer-A1 dme-miR-968-5p 3R - 21051770 21051849 3'utr Mvl FlyBase G39980.1 TCTAATTGAAAAGCGTACCAAAAACGGTTCATAAACTCTACTTACTGAGAAGCGCGAAGAGACAAAATAGAAAATCCATG 13 21051834 0.931637713 6 12 47 1 1.301029996 0.05 0.384615385 0.6 13 0 0 20 3R:21051770-21051849 7 6 2457 FBgn0011672 484.1233333 17.95 27.56 0.012393536 0.334261838 0.217706821 -4 22 9 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 3R 21054752 21054757 - 3R_21054752_21054757_- 0.948543504 0.56804083 0.758292167 0.269056039 Mvl FBtr0306350 21054646 21054959 3R - 21054740 21054782 5'utr Mvl FlyBase G52963.1 CGATGGGGTCCTATAGATTATAAGCTTGACTGTGGTAAGTCTT 13 21054750 0.896236523 4 12 117 0.923076923 0.77815125 0 0 0 13 0 1 12 3R:21054740-21054782 6 Mvl FBtr0306350 21054646 21054959 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 21054747 21054773 5'utr Mvl FlyBase G39985.1 CCTATAGATTATAAGCTTGACTGTGGT 8 21054750 0.808036018 2 7 59 0.928571429 1.113943352 0 0.25 0.571428571 8 1 0 13 3R:21054747-21054773 6 10 2458 FBgn0011672 484.1233333 17.95 27.56 0.020655893 0.557103064 0.362844702 -7 -7 -7 0.2 dme-miR-283-5p 8mer-A1 TGATATTA 3R 21054906 21054913 - 3R_21054906_21054913_- 0.541386544 0.551919831 0.546653187 0.007448168 Mvl FBtr0306350 21054646 21054959 3R - 21054857 21054933 5'utr Mvl FlyBase G52965.1 CACTCCCCCACACACCCTTGTGATATTAACACTAAATCACACGCTTAACACTACTAACACGTACCTAGTAGGGCTCT 10 21054916 0.964914364 4 9 53 0.9 0.954242509 0.1 0 0 10 1 0 9 3R:21054857-21054933 8 Mvl FBtr0306350 21054646 21054959 TGATATTA 8mer-A1 dme-miR-283-5p 3R - 21054904 21054935 5'utr Mvl FlyBase G39986.1 CACACTCCCCCACACACCCTTGTGATATTAAC 5 21054916 0.834775427 2 5 29 1 0.84509804 0 0.4 0.571428571 5 0 0 7 3R:21054904-21054935 8 4.5 2459 FBgn0011672 484.1233333 17.95 27.56 0.009295152 0.250696379 0.163280116 3 3 3 0.2 dme-miR-12-5p 6mer3-8 AATACT 3R 21062155 21062160 - 3R_21062155_21062160_- 0.737023058 0.997225711 0.867124384 0.183991023 Cortactin FBtr0306347|FBtr0306348|FBtr0306349|FBtr0084039 21061678|21061678|21061678|21061678 21062225|21062225|21062225|21062225 3R - 21062138 21062169 3'utr Cortactin FlyBase G52978.1 GAAAACGATAATACTGATGTTGGATTATAAAC 11 21062152 0.831483943 2 10 80 0.9375 0.875061263 0.3125 0.363636364 0.5625 11 0 1 15 3R:21062138-21062169 6 Cortactin FBtr0084039|FBtr0306349|FBtr0306348|FBtr0306347 21061678|21061678|21061678|21061678 21062225|21062225|21062225|21062225 AATACT 6mer3-8 dme-miR-12-5p 3R - 21062136 21062169 3'utr Cortactin FlyBase G39996.1 GAAAACGATAATACTGATGTTGGATTATAAACCA 6 21062152 0.891972235 2 6 43 1 1.079181246 0.25 0.666666667 0.833333333 6 0 0 12 3R:21062136-21062169 6 8.5 2460 FBgn0025865 2939.633333 150.03 230.9266667 0.002891517 0.056655336 0.036808222 -8 -8 -8 0.2 dme-miR-92b-3p 8mer-A1 GTGCAATA 3R 21070529 21070536 + 3R_21070529_21070536_+ 0.628913062 0.628915239 0.628914151 1.48E-06 AnxB9 FBtr0089517 21070330 21070539 3R + 21070499 21070552 3'utr-intron AnxB9 FlyBase G44364.1 AATCTACAAAACGCTTAGTATTTTCCCTCTGTGCAATAACGTCTAACGTTCAAC 58 21070522 0.966970556 9 55 499 0.974683544 1.58546073 0.17721519 0.293103448 0.481012658 58 1 1 77 3R:21070499-21070552 8 AnxB9 FBtr0089517 21070330 21070539 GTGCAATA 8mer-A1 dme-miR-92b-3p 3R + 21070508 21070550 3'utr-intron AnxB9 FlyBase G33526.1 AACGCTTAGTATTTTCCCTCTGTGCAATAACGTCTAACGTTCA 46 21070534 0.836817315 7 43 425 0.9375 1.77815125 0.234375 0.326086957 0.515625 46 4 0 60 3R:21070508-21070550 8 47.5 2461 FBgn0000083 3186.973333 280.66 427.6933333 0.014904423 0.169243925 0.111060885 7 -5 1 0.2 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3R 21110770 21110776 + 3R_21110770_21110776_+ 0.80541159 0.807059395 0.806235492 0.001165171 rtet FBtr0084009|FBtr0084009 21110706|21110706 21110834|21110834 3R + 21110728 21110804 3'utr rtet FlyBase G44381.1 TTAAACTCACTAGAGATCAACGGAAGTATTAGCTGCACATTATACTTAATTTATCGTTTTTTACAAGTATTTTATAT 21 21110767 0.990413708 7 19 195 0.923076923 1.079181246 0.153846154 0.19047619 0.346153846 21 1 1 24 3R:21110728-21110804 7 rtet FBtr0084009|FBtr0084009 21110706|21110706 21110834|21110834 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3R + 21110729 21110802 3'utr rtet FlyBase G33536.1 TAAACTCACTAGAGATCAACGGAAGTATTAGCTGCACATTATACTTAATTTATCGTTTTTTACAAGTATTTTAT 23 21110767 0.981726444 10 22 193 0.944444444 1.531478917 0.083333333 0.391304348 0.611111111 23 2 0 34 3R:21110729-21110802 7 13.5 2462 FBgn0028468 207.3333333 14.48 21.91 0.06511254 0.932320442 0.616157006 3 3 3 0.2 dme-miR-999-3p 7mer-m8 AGTTAAC 3R 21115688 21115694 + 3R_21115688_21115694_+ 0.673973615 0.637269813 0.655621714 0.025953506 Rab11 FBtr0084011|FBtr0084010 21115383|21115383 21116146|21116146 3R + 21115658 21115717 3'utr Rab11 FlyBase G44387.1 AAAGAATCGAAAGCAACAACATCCGGCTGTAGTTAACTGCGGTTTAAACTGAAGTTTTAT 34 21115679 0.822651977 7 28 158 0.837209302 1.556302501 0.11627907 0.264705882 0.418604651 34 7 0 36 3R:21115658-21115717 7 Rab11 FBtr0084010|FBtr0084011 21115383|21115383 21116146|21116146 AGTTAAC 7mer-m8 dme-miR-999-3p 3R + 21115662 21115701 3'utr Rab11 FlyBase G33545.1 AATCGAAAGCAACAACATCCGGCTGTAGTTAACTGCGGTT 15 21115679 0.966826174 6 13 63 0.923076923 1.380211242 0.307692308 0.466666667 0.692307692 15 2 0 24 3R:21115662-21115701 7 24.5 2463 FBgn0015790 5922.233333 446.8466667 689.1166667 0.004136953 0.054828651 0.035552761 9 9 9 0.2 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 21115801 21115806 + 3R_21115801_21115806_+ 0.999827454 0.999975086 0.99990127 0.000104369 Rab11 FBtr0084011|FBtr0084010 21115383|21115383 21116146|21116146 3R + 21115769 21115813 3'utr Rab11 FlyBase G44388.1 CAAGCAAAACTAAACACTCCAAATTCAGTTTAAGCTGTAGAACTA 8 21115793 0.884779434 6 8 46 1 1 0.2 0.25 0.4 8 0 0 10 3R:21115769-21115813 6 Rab11 FBtr0084010|FBtr0084011 21115383|21115383 21116146|21116146 AGCTGT 6mer3-8 dme-miR-1008-3p 3R + 21115723 21115814 3'utr Rab11 FlyBase G33546.1 TACAGATCCATGAGTATCGCATAAATCGACCGCCGCGGAAAGAAAGCAAGCAAAACTAAACACTCCAAATTCAGTTTAAGCTGTAGAACTAT 8 21115791 0.987906754 5 6 49 0.777777778 0.84509804 0 0.125 0.222222222 8 2 0 7 3R:21115723-21115814 6 5 2464 FBgn0015790 5922.233333 446.8466667 689.1166667 0.000844276 0.011189521 0.007255665 8 10 9 0.2 dme-miR-184-5p 6mer3-8 TGATAA 3R 21116033 21116038 + 3R_21116033_21116038_+ 0.999794465 0.999998383 0.999896424 0.000144179 Rab11 FBtr0084011|FBtr0084010 21115383|21115383 21116146|21116146 3R + 21115987 21116043 3'utr Rab11 FlyBase G44390.1 GGTTTCTCGCAACATTTTAAACGATTGGCCACTTGGTAAAACTAGCTGATAAAGAGA 5 21116033 0.955132334 4 5 27 1 0.698970004 0.4 0 0 5 0 0 5 3R:21115987-21116043 6 Rab11 FBtr0084010|FBtr0084011 21115383|21115383 21116146|21116146 TGATAA 6mer3-8 dme-miR-184-5p 3R + 21116005 21116049 3'utr Rab11 FlyBase G33547.1 AAACGATTGGCCACTTGGTAAAACTAGCTGATAAAGAGAAATCAA 6 21116029 0.948312603 5 6 26 1 0.954242509 0.444444444 0.333333333 0.555555556 6 0 0 9 3R:21116005-21116049 6 4.5 2465 FBgn0015790 5922.233333 446.8466667 689.1166667 0.000759848 0.010070569 0.006530099 0 4 2 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3R 21116121 21116127 + 3R_21116121_21116127_+ 0.517483299 0.521215688 0.519349493 0.002639205 Rab11 FBtr0084011|FBtr0084010 21115383|21115383 21116146|21116146 3R + 21116088 21116146 3'utr Rab11 FlyBase G44391.1 CGAAATAACATCATTTGTGTTTGCTATGTTAAGTGTGATTAAATAAATATAATTTAAAT 13 21116128 0.904332942 8 11 119 0.8 1.079181246 0 0.153846154 0.266666667 13 3 0 12 3R:21116088-21116146 7 Rab11 FBtr0084010|FBtr0084011 21115383|21115383 21116146|21116146 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 21116092 21116131 3'utr Rab11 FlyBase G33548.1 ATAACATCATTTGTGTTTGCTATGTTAAGTGTGATTAAAT 6 21116129 0.989468937 5 5 48 0.818181818 0.954242509 0.181818182 0.666666667 0.818181818 6 2 0 9 3R:21116092-21116131 7 9 2466 FBgn0015790 5922.233333 446.8466667 689.1166667 0.001519697 0.020141137 0.013060198 -7 -8 -7.5 0.2 dme-bantam-3p 6mer3-8 TGATCT 3R 21119472 21119477 - 3R_21119472_21119477_- 0.579349527 0.550964927 0.565157227 0.020070943 slmb FBtr0330049|FBtr0084032 21119250|21119250 21120458|21120719 3R - 21119448 21119495 3'utr slmb FlyBase G53019.1 AAGTTCCAATGCTATACTTGATCTGGATCACGATCACGCCGCTTCCGC 59 21119478 0.728193433 5 55 444 0.93442623 1.153814864 0.163934426 0.033898305 0.06557377 59 1 3 57 3R:21119448-21119495 6 slmb FBtr0330049|FBtr0084032 21119250|21119250 21120458|21120719 TGATCT 6mer3-8 dme-bantam-3p 3R - 21119455 21119492 3'utr slmb FlyBase G40023.1 TTCCAATGCTATACTTGATCTGGATCACGATCACGCCG 21 21119478 0.740252078 2 17 160 0.878787879 0.860338007 0.333333333 0.428571429 0.636363636 21 1 3 29 3R:21119455-21119492 6 40 2467 FBgn0023423 1620.336667 64.75333333 99.38333333 0.024686228 0.617728817 0.402481972 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 21119535 21119540 - 3R_21119535_21119540_- 0.984645866 0.865066321 0.924856093 0.084555546 slmb FBtr0330049|FBtr0330049|FBtr0330049|FBtr0084032|FBtr0084032|FBtr0084032 21119250|21119250|21119250|21119250|21119250|21119250 21120458|21120458|21120458|21120719|21120719|21120719 3R - 21119527 21119559 3'utr slmb FlyBase G53020.1 ATGTATGCCGTTCGTTGATTGTGATCAATGGAT 8 21119542 0.716516843 5 8 66 1 0.954242509 0.333333333 0.125 0.222222222 8 0 0 9 3R:21119527-21119559 6 slmb FBtr0330049|FBtr0330049|FBtr0330049|FBtr0084032|FBtr0084032|FBtr0084032 21119250|21119250|21119250|21119250|21119250|21119250 21120458|21120458|21120458|21120719|21120719|21120719 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 21119496 21119551 3'utr slmb FlyBase G40024.1 CGTTCGTTGATTGTGATCAATGGATATTTTACTATGTGTATTGCTATTTGTAAGTT 6 21119540 0.990275944 5 6 67 1 0.954242509 0.111111111 0.5 0.666666667 6 0 0 9 3R:21119496-21119551 6 5.5 2468 FBgn0023423 1620.336667 64.75333333 99.38333333 0.003394356 0.084937712 0.055341271 2 0 1 0.2 dme-bantam-3p 6mer3-8 TGATCT 3R 21119642 21119647 - 3R_21119642_21119647_- 0.810036223 0.858492237 0.83426423 0.034263566 slmb FBtr0330049|FBtr0084032 21119250|21119250 21120458|21120719 3R - 21119579 21119692 3'utr slmb FlyBase G53021.1 AATGGATCCATTGTACTGCAATATATAACCGATTCTTTGATTGATTGATCTATGCTAACTATAGGTTTTAGATATACCGATGTATGTAGAAAATAGCAAATTCCCAGGCAATTT 65 21119648 0.989110557 16 63 594 0.973333333 1.86332286 0.386666667 0.123076923 0.24 65 2 0 73 3R:21119579-21119692 6 slmb FBtr0330049|FBtr0084032 21119250|21119250 21120458|21120719 TGATCT 6mer3-8 dme-bantam-3p 3R - 21119597 21119692 3'utr slmb FlyBase G40025.1 AATGGATCCATTGTACTGCAATATATAACCGATTCTTTGATTGATTGATCTATGCTAACTATAGGTTTTAGATATACCGATGTATGTAGAAAATAG 41 21119648 0.748865972 10 40 367 0.984126984 1.792391689 0.142857143 0.365853659 0.587301587 41 1 0 62 3R:21119597-21119692 6 34 2469 FBgn0023423 1620.336667 64.75333333 99.38333333 0.020983294 0.525069494 0.342109676 1 1 1 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 21120011 21120017 - 3R_21120011_21120017_- 0.653951737 0.656087114 0.655019426 0.001509956 slmb FBtr0330049|FBtr0084032 21119250|21119250 21120458|21120719 3R - 21119878 21120033 3'utr slmb FlyBase G53022.1 ACAAGTATCGCGTTTAGGCAGCTGCCGCCTCAAGAATCGCAGCAGGAATCTTCAGCGCGGCCAGAAGAATCAGTCTTTAGCATAAATGTTAGTTAGAGTTGCATCATTGAAATTGGCAGAGCGCGTTGCCGTTTTGCACATTTGTAACCTATTTTA 58 21120019 0.980102631 14 54 315 0.970149254 1.812913357 0.164179104 0.157894737 0.28358209 57 2 0 65 3R:21119878-21120033 7 slmb FBtr0330049|FBtr0084032 21119250|21119250 21120458|21120719 GGCAGCT 7mer-m8 dme-miR-980-3p 3R - 21119999 21120044 3'utr slmb FlyBase G40029.1 AGCTCAAATACACAAGTATCGCGTTTAGGCAGCTGCCGCCTCAAGA 28 21120020 0.686424971 6 27 152 0.961538462 1.698970004 0.269230769 0.535714286 0.75 28 2 0 50 3R:21119999-21120044 7 31 2470 FBgn0023423 1620.336667 64.75333333 99.38333333 0.019131827 0.478739833 0.311923528 2 3 2.5 0.2 dme-bantam-3p 6mer3-8 TGATCT 3R 21140199 21140204 + 3R_21140199_21140204_+ 0.54431952 0.620797029 0.582558275 0.054077759 meigo FBtr0084017|FBtr0113259 21140038|21140038 21140365|21140365 3R + 21140089 21140229 3'utr meigo FlyBase G44422.2 AGAAGACAATGCTTCCGGCTCGAGCGGCTGCAGCGCCAAAGTTTCCCCATTTCCTAGAACTGCTTATCGTACAAAGGATTCTAGCTATAGCGAACACAGCATTCGATACTTGATCTGCAACCCATAGACCGTCGTTTAAGT 380 21140199 0.976958796 20 357 2321 0.940919037 1.633468456 0.111597374 0.168421053 0.308533917 380 18 9 430 3R:21140089-21140229 6 meigo FBtr0113259|FBtr0084017 21140038|21140038 21140365|21140365 TGATCT 6mer3-8 dme-bantam-3p 3R + 21140089 21140228 3'utr meigo FlyBase G33560.1 AGAAGACAATGCTTCCGGCTCGAGCGGCTGCAGCGCCAAAGTTTCCCCATTTCCTAGAACTGCTTATCGTACAAAGGATTCTAGCTATAGCGAACACAGCATTCGATACTTGATCTGCAACCCATAGACCGTCGTTTAAG 234 21140199 0.80781479 25 217 1375 0.93982808 1.737722593 0.111747851 0.363247863 0.573065903 234 16 5 328 3R:21140089-21140228 6 267 2471 FBgn0250820 369.6666667 29.78 45.5 0.722272317 8.965748825 5.868131868 0 0 0 0.2 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 21140271 21140276 + 3R_21140271_21140276_+ 0.950569117 0.950726856 0.950647987 0.000111581 meigo FBtr0084017|FBtr0113259 21140038|21140038 21140365|21140365 3R + 21140249 21140323 3'utr meigo FlyBase G44423.1 TATTAGAAAAGGAACAAATATTGTGCAAAAGTTTACACCAGACCTGCGGGTCTCTAACATACAGGATCATTCAAT 63 21140269 0.888460313 5 61 294 0.971428571 1.531478917 0.185714286 0.111111111 0.2 63 1 1 68 3R:21140249-21140323 6 meigo FBtr0113259|FBtr0084017 21140038|21140038 21140365|21140365 GTGCAA 6mer3-8 dme-miR-92b-3p 3R + 21140250 21140289 3'utr meigo FlyBase G33561.1 ATTAGAAAAGGAACAAATATTGTGCAAAAGTTTACACCAG 52 21140269 0.665891228 2 49 237 0.972222222 1.544068044 0.208333333 0.307692308 0.5 52 1 1 70 3R:21140250-21140289 6 53.5 2472 FBgn0250820 369.6666667 29.78 45.5 0.144724977 1.796507723 1.175824176 2 2 2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 21159358 21159363 - 3R_21159358_21159363_- 0.730851449 0.730944399 0.730897924 6.58E-05 CG10824 FBtr0084028|FBtr0084028|FBtr0084028 21159236|21159236|21159236 21159389|21159389|21159389 3R - 21159320 21159375 3'utr CG10824 FlyBase G53041.1 GCCCATTTTTTATGTGATCACTACATTTTCAAAGCTTTACAATTATATGTATACAT 32 21159366 0.978663783 9 23 301 0.785714286 0.740362689 0.119047619 0.1875 0.380952381 32 4 5 33 3R:21159320-21159375 6 CG10824 FBtr0084028|FBtr0084028|FBtr0084028 21159236|21159236|21159236 21159389|21159389|21159389 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 21159332 21159375 3'utr CG10824 FlyBase G40046.1 GCCCATTTTTTATGTGATCACTACATTTTCAAAGCTTTACAATT 31 21159366 0.587900496 11 26 280 0.818181818 0.711204461 0.090909091 0.322580645 0.522727273 31 2 6 36 3R:21159332-21159375 6 28.5 2473 FBgn0038865 99.77666667 6.58 10.09 0.285637925 4.331306991 2.824578791 3 3 3 0.2 dme-miR-283-5p 6mer2-7 GATATT 3R 21213975 21213980 + 3R_21213975_21213980_+ 0.987770254 0.995299824 0.991535039 0.005324161 SNF4Agamma FBtr0301586|FBtr0301588 21212526|21212526 21214269|21214269 3R + 21213947 21214006 3'utr SNF4Agamma FlyBase G44457.1 ATTACTAGATTAAACAATGAGAAATTTGGATATTGAATTAATAATGGTAAAAGGCTTAAC 24 21213973 0.955261367 7 24 187 1 1.477121255 0 0.25 0.4 24 0 0 30 3R:21213947-21214006 6 SNF4Agamma FBtr0301588|FBtr0301586 21212526|21212526 21214269|21214269 GATATT 6mer2-7 dme-miR-283-5p 3R + 21213952 21213987 3'utr SNF4Agamma FlyBase G33590.1 TAGATTAAACAATGAGAAATTTGGATATTGAATTAA 21 21213973 0.862708028 5 21 164 1 1.462397998 0.034482759 0.285714286 0.482758621 21 0 0 29 3R:21213952-21213987 6 21.5 2474 FBgn0264357 1601.583333 44.32333333 67.41333333 0.013424216 0.485071821 0.318928006 2 2 2 0.2 dme-miR-1002-5p 7mer-m8 CTACTTA 3R 21266397 21266403 - 3R_21266397_21266403_- 0.535899164 0.571308202 0.553603683 0.025037944 Rab1 FBtr0084104 21266027 21266947 3R - 21266385 21266466 3'utr Rab1 FlyBase G53065.1 TAACTACACATTAATTGAGCGCAGGCGACGGCAGGAGCAATTGTACTTGTCCTGTGTCAGCTACTACTTACCACTATGTATA 21 21266399 0.965452715 7 21 127 1 1.361727836 0.347826087 0.095238095 0.173913043 21 0 0 23 3R:21266385-21266466 7 Rab1 FBtr0084104 21266027 21266947 CTACTTA 7mer-m8 dme-miR-1002-5p 3R - 21266372 21266454 3'utr Rab1 FlyBase G40068.1 AATTGAGCGCAGGCGACGGCAGGAGCAATTGTACTTGTCCTGTGTCAGCTACTACTTACCACTATGTATACATATGTATGTGT 11 21266399 0.963019567 7 10 58 0.928571429 0.812913357 0.428571429 0.181818182 0.357142857 11 0 1 13 3R:21266372-21266454 7 8 2475 FBgn0016700 3065.546667 206.5566667 315.7 0.002609649 0.038730292 0.025340513 -4 -4 -4 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 21271338 21271343 - 3R_21271338_21271343_- 0.730939151 0.730894195 0.730916673 3.18E-05 CG3308 FBtr0084102|FBtr0084102|FBtr0084102 21271076|21271076|21271076 21271954|21271954|21271954 3R - 21271323 21271391 3'utr CG3308 FlyBase G53081.1 TTCTTGTTGCGACGATGACGATGATGATGATGATTATGGGAAACGTAATGTGATCATTTTAAAAGCTAA 36 21271345 0.704356967 14 34 253 0.953488372 1.311753861 0.558139535 0.138888889 0.279069767 36 1 1 41 3R:21271323-21271391 6 CG3308 FBtr0084102|FBtr0084102|FBtr0084102 21271076|21271076|21271076 21271954|21271954|21271954 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 21271317 21271443 3'utr CG3308 FlyBase G40081.1 ACTTTTAGTTTGTGTCTCTGTTAGCCTGTAGTCGTACTTTTGTACATATTTATTCTTGTTGCGACGATGACGATGATGATGATGATTATGGGAAACGTAATGTGATCATTTTAAAAGCTAATTAGTT 37 21271335 0.988787621 16 34 342 0.903225806 1.748188027 0.483870968 0.486486486 0.693548387 37 6 0 56 3R:21271317-21271443 6 22 2476 FBgn0038877 892.1133333 50.83666667 77.60666667 0.024660544 0.432758508 0.283480801 2 -8 -3 0.2 dme-miR-980-3p 6mer2-7 GCAGCT 3R 21271485 21271490 - 3R_21271485_21271490_- 0.999933477 0.996684662 0.99830907 0.002297249 CG3308 FBtr0084102 21271076 21271954 3R - 21271474 21271523 3'utr CG3308 FlyBase G53083.1 CTCCCGAAGCGATATATGTTAATGTTAAGTGCTGCAGCTTGTCTTTTGTT 16 21271482 0.967894432 10 15 143 0.95 0.977723605 0.05 0.25 0.4 16 0 1 19 3R:21271474-21271523 6 CG3308 FBtr0084102 21271076 21271954 GCAGCT 6mer2-7 dme-miR-980-3p 3R - 21271462 21271508 3'utr CG3308 FlyBase G40082.1 ATGTTAATGTTAAGTGCTGCAGCTTGTCTTTTGTTTGTTTCTTCTGT 23 21271482 0.90662099 8 23 237 1 1.531478917 0.294117647 0.260869565 0.5 23 0 0 34 3R:21271462-21271508 6 17.5 2477 FBgn0038877 892.1133333 50.83666667 77.60666667 0.019616342 0.344239722 0.225496091 -8 -8 -8 0.2 dme-miR-932-5p 6mer3-8 GGAATT 3R 21271650 21271655 - 3R_21271650_21271655_- 0.505637715 0.583319841 0.544478778 0.05492954 CG3308 FBtr0084102 21271076 21271954 3R - 21271571 21271680 3'utr CG3308 FlyBase G53084.1 TTGCAGGGTCTAGCTTTAAGTTGTTGGAATTTCCGAGCAATTGCTTTATTTACTCGAGTACCCAGAGAAACGGTGCCAAGGTGGTGCCTCGTGAACGTCGACTCCGGATT 16 21271640 0.986028902 11 15 123 0.947368421 1.255272505 0.052631579 0.0625 0.210526316 16 1 0 18 3R:21271571-21271680 6 CG3308 FBtr0084102 21271076 21271954 GGAATT 6mer3-8 dme-miR-932-5p 3R - 21271630 21271689 3'utr CG3308 FlyBase G40083.1 GATCGAAGTTTGCAGGGTCTAGCTTTAAGTTGTTGGAATTTCCGAGCAATTGCTTTATTT 9 21271650 0.759354835 5 8 79 0.833333333 1 0.333333333 0.333333333 0.5 9 2 0 10 3R:21271630-21271689 6 6 2478 FBgn0038877 892.1133333 50.83666667 77.60666667 0.006725603 0.118025048 0.077312946 -15 -5 -10 0.2 dme-miR-305-3p 7mer-m8 ATGTGCC 3R 21271836 21271842 - 3R_21271836_21271842_- 0.674408292 0.674513855 0.674461074 7.47E-05 CG3308 FBtr0084102 21271076 21271954 3R - 21271770 21272096 lincRNA_intron-lincRNA_exon CG3308 FlyBase G53085.1 CAGATATTGTACCTTCCAACGCAACGAGCCGTGCAGTTTGCCCGCCATTGTAGAGATGATAGCCGCCTTCATGAAGAAAAGCCCGGACGAGGTGGCTTTGGCCACTGCCTTTAATGCCCTGAAACTGTTTGGCTTGTCCTAGAAAATGGTAAAGGAGCCACATGGAACTGAACGACAAAGTGTGCCACCCAGCAGCTTTAAACCCGTAACTCTATAGATTCAACGAGCCTGAGATTCACGATAGACTCATACCTATGTGCCTTAACCACTAATCGAATTCAGGATGAAGCGCTTATCCTGATCCCCACACATACACACATCCACAAA 194 21271841 0.984368764 32 189 994 0.974137931 2.053078443 0.254310345 0.164948454 0.301724138 194 5 1 226 3R:21271770-21272096 7 CG3308 FBtr0084102 21271076 21271954 ATGTGCC 7mer-m8 dme-miR-305-3p 3R - 21271789 21271946 3'utr CG3308 FlyBase G40084.1 AAAGGAGCCACATGGAACTGAACGACAAAGTGTGCCACCCAGCAGCTTTAAACCCGTAACTCTATAGATTCAACGAGCCTGAGATTCACGATAGACTCATACCTATGTGCCTTAACCACTAATCGAATTCAGGATGAAGCGCTTATCCTGATCCCCAC 121 21271841 0.981685715 13 116 574 0.938888889 1.625826713 0.261111111 0.363636364 0.572222222 121 8 3 169 3R:21271789-21271946 7 65.5 2479 FBgn0038877 892.1133333 50.83666667 77.60666667 0.073421165 1.288440102 0.843999656 -1 -1 -1 0.2 dme-miR-14-3p 6mer3-8 AAGACT 3R 21320908 21320913 - 3R_21320908_21320913_- 0.622780256 0.57440859 0.598594423 0.034203957 CG16791 FBtr0343807|FBtr0343805|FBtr0084095|FBtr0343806 21318298|21320758|21318298|21320758 21321053|21321053|21321053|21321053 3R - 21320877 21320990 3'utr CG16791 FlyBase G53092.1 AAAGCGCTACGTATACATCACTAATTCCCCGAAACCAAATCCCATTATGATCATCGACATGTATACAAGACACATCTAAGACTTATTGTATATTTCGTGTAGTATGTGTAAGGC 162 21320905 0.976922097 11 154 1008 0.964102564 1.797036595 0.071794872 0.166666667 0.307692308 162 5 2 188 3R:21320877-21320990 6 CG16791 FBtr0343806|FBtr0084095|FBtr0343805|FBtr0343807 21320758|21318298|21320758|21318298 21321053|21321053|21321053|21321053 AAGACT 6mer3-8 dme-miR-14-3p 3R - 21320881 21320962 3'utr CG16791 FlyBase G40094.1 CCGAAACCAAATCCCATTATGATCATCGACATGTATACAAGACACATCTAAGACTTATTGTATATTTCGTGTAGTATGTGTA 121 21320905 0.752327661 8 111 726 0.924324324 1.931966115 0.081081081 0.380165289 0.594594595 121 13 1 171 3R:21320881-21320962 6 107.5 2480 FBgn0038881 628.8366667 15.01 23.02333333 0.170950591 7.161892072 4.669176198 -8 -8 -8 0.2 dme-miR-317-3p 6mer2-7 GTGTTC 3R 21361863 21361868 + 3R_21361863_21361868_+ 0.991578864 0.988655202 0.990117033 0.002067368 pre-mod(mdg4)-Z FBtr0303402 21361829 21362131 3R + 21361839 21361882 3'utr pre-mod(mdg4)-Z FlyBase G44529.1 TATACATTCCCAACCCAAACGTTCGTGTTCTGTTAGGGCTAAGC 8 21361869 0.983086829 3 8 63 1 0.954242509 0 0.125 0.222222222 8 0 0 9 3R:21361839-21361882 6 pre-mod(mdg4)-Z FBtr0303402 21361829 21362131 GTGTTC 6mer2-7 dme-miR-317-3p 3R + 21361843 21361883 3'utr pre-mod(mdg4)-Z FlyBase G33639.1 CATTCCCAACCCAAACGTTCGTGTTCTGTTAGGGCTAAGCT 8 21361869 0.654697288 2 8 70 1 1.041392685 0.181818182 0.25 0.454545455 8 0 0 11 3R:21361843-21361883 6 8 2481 FBgn0261838 149.3333333 9.943333333 15.14333333 0.053571429 0.804559169 0.528285274 -6 -6 -6 0.2 dme-miR-14-3p 7mer-A1 AGACTGA 3R 21361925 21361931 + 3R_21361925_21361931_+ 0.820805411 0.822082066 0.821443738 0.000902763 pre-mod(mdg4)-Z FBtr0303402 21361829 21362131 3R + 21361905 21361993 3'utr pre-mod(mdg4)-Z FlyBase G44530.1 TGAGCGTATATCATTGATTTAGACTGAGTGTCCCGAGCCTAGTTAGGATGGGTAAGTAGCCTGTTCATCTGGGATCTCAAAGTACCATT 96 21361923 0.888712736 17 88 710 0.923076923 1.73239376 0.247863248 0.166666667 0.316239316 96 8 1 108 3R:21361905-21361993 7 pre-mod(mdg4)-Z FBtr0303402 21361829 21362131 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 21361902 21361987 3'utr pre-mod(mdg4)-Z FlyBase G33640.1 TCTTGAGCGTATATCATTGATTTAGACTGAGTGTCCCGAGCCTAGTTAGGATGGGTAAGTAGCCTGTTCATCTGGGATCTCAAAGT 65 21361923 0.791859326 10 62 475 0.927083333 1.347330015 0.364583333 0.323076923 0.541666667 65 4 3 89 3R:21361902-21361987 7 65.5 2482 FBgn0261838 149.3333333 9.943333333 15.14333333 0.438616071 6.587328193 4.325335681 2 2 2 0.2 dme-miR-305-5p 7mer-A1 GTACAAA 3R 21527137 21527143 + 3R_21527137_21527143_+ 0.743193223 0.781577795 0.762385509 0.027142011 CG7956 FBtr0334664 21526920 21527691 3R + 21527097 21527147 3'utr CG7956 FlyBase G44556.1 TTATCTTTACAATAAATACCTAAGACTAGCATGTATTATTGTACAAAAAAA 8 21527135 0.974888575 3 8 56 1 0.954242509 0 0.125 0.222222222 8 0 0 9 3R:21527097-21527147 7 CG7956 FBtr0334664 21526920 21527691 GTACAAA 7mer-A1 dme-miR-305-5p 3R + 21527109 21527147 3'utr CG7956 FlyBase G33659.1 TAAATACCTAAGACTAGCATGTATTATTGTACAAAAAAA 5 21527133 0.98405328 5 5 33 1 0.698970004 0 0 0 5 0 0 5 3R:21527109-21527147 7 4.5 2483 FBgn0038890 1061.573333 33.39 51.31 0.004238991 0.134770889 0.087702202 2 4 3 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3R 21527808 21527814 + 3R_21527808_21527814_+ 0.521222876 0.520773137 0.520998006 0.000318057 CG7956 FBtr0301211 21527595 21528598 3R + 21527782 21527836 3'utr CG7956 FlyBase G44558.1 ATAATGTAGTTGATATACGCCATATTTGTGATTGTTATAGCACCAAGCTGTAGTG 48 21527814 0.590203976 7 46 452 0.981818182 1.431363764 0.072727273 0.125 0.236363636 48 0 1 54 3R:21527782-21527836 7 CG7956 FBtr0301211 21527595 21528598 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 21527793 21527858 3'utr CG7956 FlyBase G33660.1 GATATACGCCATATTTGTGATTGTTATAGCACCAAGCTGTAGTGAGTTTATAGATTTTTGGGCAAC 25 21527814 0.988218921 6 24 217 0.977777778 1.643452676 0.044444444 0.56 0.755555556 25 1 0 44 3R:21527793-21527858 7 34 2484 FBgn0038890 1061.573333 33.39 51.31 0.032027933 1.018268943 0.662638862 -6 -6 -6 0.2 dme-miR-276a-3p 7mer-m8 AGTTCCT 3R 21570773 21570779 - 3R_21570773_21570779_- 0.443984072 0.505681394 0.474832733 0.043626579 InR FBtr0084121|FBtr0290232|FBtr0290230|FBtr0290231 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 3R - 21570714 21570921 3'utr InR FlyBase G53139.2 ATTAATTTAACAATGTAATACGCTATATGCATAACGAAACAATAGATATTCTACACAAACACACATGCACACAGACACCCACACACCCATACACACATTTACATATATTACACACATACACACTAAAAAGACTGAAAGATATAGTTCCTTTTGTTTTTATGTACATAAAAAAATGTGAAAAGAAAAAAGAGAAATTCTAACGAAAATC 303 21570805 0.999945463 24 268 1646 0.883333333 1.461034435 0.111111111 0.138613861 0.275 303 32 10 318 3R:21570714-21570921 7 InR FBtr0290230|FBtr0290231|FBtr0084121|FBtr0290232 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 AGTTCCT 7mer-m8 dme-miR-276a-3p 3R - 21570728 21570817 3'utr InR FlyBase G40139.1 ATATTACACACATACACACTAAAAAGACTGAAAGATATAGTTCCTTTTGTTTTTATGTACATAAAAAAATGTGAAAAGAAAAAAGAGAAA 239 21570772 0.975740556 16 211 1338 0.872881356 1.410777233 0.076271186 0.372384937 0.576271186 239 34 11 309 3R:21570728-21570817 7 125 2485 FBgn0013984 3333.303333 37.67666667 58.15666667 0.037500338 3.317703265 2.149366653 26 -7 9.5 0.2 dme-miR-1012-3p 7mer-A1 TGACTAA 3R 21571281 21571287 - 3R_21571281_21571287_- 0.580491999 0.565868593 0.573180296 0.010340305 InR FBtr0084121|FBtr0290232|FBtr0290230|FBtr0290231 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 3R - 21571257 21571362 3'utr InR FlyBase G53142.1 ACAACAAAAGTATTCGATATTTGCCTTCGCTCTTTATATTATTATATATTTAACTATACAAACACATATATTTAATGACTAAATGAAAGCAAAGCAAAGCAAAGAA 53 21571279 0.979477025 7 51 209 0.970588235 1.51851394 0.014705882 0.20754717 0.382352941 53 1 1 66 3R:21571257-21571362 7 InR FBtr0290230|FBtr0290231|FBtr0084121|FBtr0290232 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 TGACTAA 7mer-A1 dme-miR-1012-3p 3R - 21571259 21571304 3'utr InR FlyBase G40143.1 CAAACACATATATTTAATGACTAAATGAAAGCAAAGCAAAGCAAAG 33 21571279 0.969058928 3 31 111 0.948717949 1.091080469 0.025641026 0.181818182 0.307692308 33 0 2 37 3R:21571259-21571304 7 39.5 2486 FBgn0013984 3333.303333 37.67666667 58.15666667 0.011850107 1.048394232 0.679199862 -8 -8 -8 0.2 dme-miR-7-5p 6mer3-8 GTCTTC 3R 21572393 21572398 - 3R_21572393_21572398_- 0.997792795 0.989877239 0.993835017 0.005597174 InR FBtr0084121|FBtr0290232|FBtr0290230|FBtr0290231 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 3R - 21572317 21572416 3'utr InR FlyBase G53148.1 AAAAACAAAACAGCAACTGTCTTCACTGAGTTAGCTAGCAATAGTTATAATTATCCAAACACCCGAACTACACGTAACTAGGTTTAAATGTTATTCAGCT 39 21572398 0.973760682 14 35 214 0.884615385 1.662757832 0 0.230769231 0.423076923 39 6 0 46 3R:21572317-21572416 6 InR FBtr0290230|FBtr0290231|FBtr0084121|FBtr0290232 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 GTCTTC 6mer3-8 dme-miR-7-5p 3R - 21572336 21572453 3'utr InR FlyBase G40151.1 GAAATAGATGAACTCTACAACAGCAAACAAGCAATACAAAAACAAAACAGCAACTGTCTTCACTGAGTTAGCTAGCAATAGTTATAATTATCCAAACACCCGAACTACACGTAACTAG 25 21572399 0.981590083 10 19 139 0.714285714 1.397940009 0.171428571 0.32 0.514285714 25 10 0 25 3R:21572336-21572453 6 18 2487 FBgn0013984 3333.303333 37.67666667 58.15666667 0.005400049 0.47774927 0.309508798 0 1 0.5 0.2 dme-miR-8-3p 6mer2-7 AGTATT 3R 21572798 21572803 - 3R_21572798_21572803_- 0.684817776 0.997615738 0.841216757 0.221181516 InR FBtr0084121|FBtr0290232|FBtr0290230|FBtr0290231 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 3R - 21572786 21572821 3'utr InR FlyBase G53151.1 ATGTTTACGTATTCGTTTAGTATTTACTCTACATTT 6 21572799 0.907974838 3 4 58 0.777777778 0.84509804 0.222222222 0.5 0.666666667 6 2 0 7 3R:21572786-21572821 6 InR FBtr0290230|FBtr0290231|FBtr0084121|FBtr0290232 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 AGTATT 6mer2-7 dme-miR-8-3p 3R - 21572757 21572850 3'utr InR FlyBase G40155.1 AATACCAATAGTTTCGATTAAGCCTATTTATGTTTACGTATTCGTTTAGTATTTACTCTACATTTTTTGTTTGTTTAAATTAATGCACTAGAGC 8 21572806 0.992650458 6 7 79 0.928571429 1.113943352 0 0.375 0.642857143 8 1 0 13 3R:21572757-21572850 6 4 2488 FBgn0013984 3333.303333 37.67666667 58.15666667 0.001200011 0.106166504 0.068779733 -4 3 -0.5 0.2 dme-miR-965-3p 7mer-A1 ACGCTTA 3R 21786170 21786176 - 3R_21786170_21786176_- 0.792295257 0.809583289 0.800939273 0.012224462 CASK FBtr0084162|FBtr0112873|FBtr0301327|FBtr0301328|FBtr0084161|FBtr0330368|FBtr0112872 21785760|21785760|21783398|21785760|21785760|21785760|21785760 21786682|21786682|21786682|21786682|21786682|21786589|21786682 3R - 21786109 21786210 3'utr CASK FlyBase G53257.1 TGTTTTATTCAGCATTTAGTCAAAACAGCATTAAACGCTTATGTAAATCTTGCACTTGTTAGTGTCTAAGTTAAATGGAGTTAGACAAATCGAAACTGAAGC 37 21786153 0.987016403 15 35 297 0.955555556 1.633468456 0.111111111 0.216216216 0.355555556 37 2 0 43 3R:21786109-21786210 7 CASK FBtr0301328|FBtr0084161|FBtr0330368|FBtr0112872|FBtr0084162|FBtr0112873|FBtr0301327 21785760|21785760|21785760|21785760|21785760|21785760|21783398 21786682|21786682|21786589|21786682|21786682|21786682|21786682 ACGCTTA 7mer-A1 dme-miR-965-3p 3R - 21786125 21786226 3'utr CASK FlyBase G40239.1 ATTGTTTTGTTGTATTTGTTTTATTCAGCATTTAGTCAAAACAGCATTAAACGCTTATGTAAATCTTGCACTTGTTAGTGTCTAAGTTAAATGGAGTTAGAC 24 21786179 0.984813899 14 23 189 0.96875 1.491361694 0.0625 0.291666667 0.46875 24 1 0 31 3R:21786125-21786226 7 16 2489 FBgn0013759 1781.206667 49.49333333 75.88666667 0.008982675 0.323275862 0.210840727 -23 3 -10 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 3R 21786240 21786245 - 3R_21786240_21786245_- 0.946818622 0.925894282 0.936356452 0.014795714 CASK FBtr0084162|FBtr0112873|FBtr0301327|FBtr0301328|FBtr0084161|FBtr0330368|FBtr0112872 21785760|21785760|21783398|21785760|21785760|21785760|21785760 21786682|21786682|21786682|21786682|21786682|21786589|21786682 3R - 21786224 21786278 3'utr CASK FlyBase G53258.1 TTTAATCGATTGTATTTGCCATTCCATGCTCAATGTGTTATATTTTACGATTATT 9 21786245 0.891542328 5 8 82 1 1.146128036 0.357142857 0.333333333 0.571428571 9 0 0 14 3R:21786224-21786278 6 CASK FBtr0301328|FBtr0084161|FBtr0330368|FBtr0112872|FBtr0084162|FBtr0112873|FBtr0301327 21785760|21785760|21785760|21785760|21785760|21785760|21783398 21786682|21786682|21786589|21786682|21786682|21786682|21786682 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 21786232 21786275 3'utr CASK FlyBase G40240.1 AATCGATTGTATTTGCCATTCCATGCTCAATGTGTTATATTTTA 14 21786245 0.723780237 4 13 136 0.875 1.322219295 0.125 0.571428571 0.75 14 3 0 21 3R:21786232-21786275 6 8.5 2490 FBgn0013759 1781.206667 49.49333333 75.88666667 0.004772046 0.171740302 0.112009136 0 0 0 0.2 dme-bantam-3p 8mer-A1 TGATCTCA 3R 21851167 21851174 - 3R_21851167_21851174_- 0.630887962 0.630988425 0.630938193 7.10E-05 glec FBtr0084157 21850692 21851709 3R - 21851137 21851363 3'utr glec FlyBase G53271.1 GATATCGGTCTTATAATGGAAATTATTAAGTTAATGGATATGTGCTAATGTTAGACAAGCGATCGACAGCGCCATGCATCCACTATATATAGACTAAACCCCAACCCAAACCAATTCAAGCGTTCTCAGCGTGTTTTCGGGTCCAGATGCACGCGTGTGCCAAAAGTATTTACAATTTACTTTGTGTCATGATCTCAATTATTAAAAACAATTTTATTATTTTGTTT 358 21851174 0.987084384 40 342 2981 0.971365639 2.042378598 0.167400881 0.198879552 0.370044053 357 10 3 441 3R:21851137-21851363 8 glec FBtr0084157 21850692 21851709 TGATCTCA 8mer-A1 dme-bantam-3p 3R - 21851154 21851329 3'utr glec FlyBase G40253.1 TGGATATGTGCTAATGTTAGACAAGCGATCGACAGCGCCATGCATCCACTATATATAGACTAAACCCCAACCCAAACCAATTCAAGCGTTCTCAGCGTGTTTTCGGGTCCAGATGCACGCGTGTGCCAAAAGTATTTACAATTTACTTTGTGTCATGATCTCAATTATTAAAAACA 230 21851174 0.897124119 29 221 1929 0.962427746 2.045322979 0.161849711 0.382608696 0.589595376 230 11 2 333 3R:21851154-21851329 8 205.5 2491 FBgn0015229 300 18.05666667 27.87 0.685 11.3808381 7.373519914 0 0 0 0.2 dme-miR-283-5p 8mer-A1 TGATATTA 3R 21851645 21851652 - 3R_21851645_21851652_- 0.500458877 0.590598509 0.545528693 0.063738322 glec FBtr0084157 21850692 21851709 3R - 21851623 21851696 3'utr glec FlyBase G53273.1 TGACGATGACAAATAGCCCCTGGCGGAGCAATAATTGCAATATATGATATTAATTGTAAATGTAATTTTAATTT 24 21851656 0.858994323 8 23 158 0.964285714 1.431363764 0.142857143 0.125 0.25 24 1 0 27 3R:21851623-21851696 8 glec FBtr0084157 21850692 21851709 TGATATTA 8mer-A1 dme-miR-283-5p 3R - 21851624 21851696 3'utr glec FlyBase G40256.1 TGACGATGACAAATAGCCCCTGGCGGAGCAATAATTGCAATATATGATATTAATTGTAAATGTAATTTTAATT 18 21851664 0.931655859 10 18 110 1 1.51851394 0.121212121 0.555555556 0.757575758 18 0 0 33 3R:21851624-21851696 8 9 2492 FBgn0015229 300 18.05666667 27.87 0.03 0.498430866 0.322927879 4 12 8 0.2 dme-miR-1008-3p 8mer-A1 AGCTGTGA 3R 22016456 22016463 - 3R_22016456_22016463_- 0.447637446 0.615950585 0.531794015 0.119015405 CG6439 FBtr0084190 22016389 22016987 3R - 22016450 22016491 3'utr CG6439 FlyBase G53277.1 ATGGCTTTGAGTGGACCCACTCCACTGGAGCTGTGAGAAAGA 7 22016466 0.862281452 3 7 43 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3R:22016450-22016491 8 CG6439 FBtr0084190 22016389 22016987 AGCTGTGA 8mer-A1 dme-miR-1008-3p 3R - 22016451 22016484 3'utr CG6439 FlyBase G40259.1 TGAGTGGACCCACTCCACTGGAGCTGTGAGAAAG 5 22016466 0.930631675 3 5 18 1 0.903089987 0.125 0.4 0.625 5 0 0 8 3R:22016451-22016484 8 6 2493 FBgn0038922 288 18.82 28.82333333 0.020833333 0.318809777 0.208164681 3 3 3 0.2 dme-miR-184-5p 8mer-A1 TGATAAGA 3R 22077747 22077754 + 3R_22077747_22077754_+ 0.517130394 0.491798057 0.504464225 0.017912641 how FBtr0301402|FBtr0335195|FBtr0301401|FBtr0084177 22074557|22074557|22074557|22074557 22078463|22079321|22079321|22079321 3R + 22077727 22077758 3'utr how FlyBase G44601.1 AAGGCAATTAAGCAAACGATTGATAAGAGAAT 5 22077746 0.889513448 2 4 14 1 0.698970004 0 0 0 5 0 0 5 3R:22077727-22077758 8 how FBtr0301401|FBtr0084177|FBtr0301402|FBtr0335195 22074557|22074557|22074557|22074557 22079321|22079321|22078463|22079321 TGATAAGA 8mer-A1 dme-miR-184-5p 3R + 22077727 22077759 3'utr how FlyBase G33689.1 AAGGCAATTAAGCAAACGATTGATAAGAGAATC 5 22077746 0.876565913 2 5 15 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:22077727-22077759 8 4.5 2494 FBgn0264491 669.8 25.87 39.62333333 0.006718423 0.173946656 0.113569446 1 1 1 0.2 dme-miR-33-5p 7mer-A1 AATGCAA 3R 22077848 22077854 + 3R_22077848_22077854_+ 0.413460996 0.46758045 0.440520723 0.038268195 how FBtr0301402|FBtr0335195|FBtr0301401|FBtr0084177 22074557|22074557|22074557|22074557 22078463|22079321|22079321|22079321 3R + 22077824 22077860 3'utr how FlyBase G44602.1 AGTTCAACGAACAAAAACATACTTAATGCAAGCATAT 31 22077846 0.664302466 3 31 124 1 1.531478917 0 0.096774194 0.176470588 31 0 0 34 3R:22077824-22077860 7 how FBtr0301401|FBtr0084177|FBtr0301402|FBtr0335195 22074557|22074557|22074557|22074557 22079321|22079321|22078463|22079321 AATGCAA 7mer-A1 dme-miR-33-5p 3R + 22077803 22077873 3'utr how FlyBase G33690.1 CAAGTTAGTTCTTAGTGTAAAAGTTCAACGAACAAAAACATACTTAATGCAAGCATATACATATATATATA 17 22077846 0.962764322 4 15 85 0.9 0.954242509 0 0.470588235 0.7 17 1 2 27 3R:22077803-22077873 7 23 2495 FBgn0264491 669.8 25.87 39.62333333 0.034338609 0.889060688 0.580466055 2 2 2 0.2 dme-miR-1003-3p 8mer-A1 ATGTGAGA 3R 22078843 22078850 + 3R_22078843_22078850_+ 0.610056016 0.627552071 0.618804044 0.012371611 how FBtr0335195|FBtr0301401|FBtr0084177 22074557|22074557|22074557 22079321|22079321|22079321 3R + 22078819 22078894 3'utr how FlyBase G44606.1 ACTCTGTTGAAATTATTCTGCGAAATGTGAGACTTATACTCAGAAACAAAACGATGTTCAACCACATGGGAGTTGA 27 22078846 0.969065254 5 26 149 1 1.477121255 0.033333333 0.111111111 0.2 27 0 0 30 3R:22078819-22078894 8 how FBtr0301401|FBtr0084177|FBtr0335195 22074557|22074557|22074557 22079321|22079321|22079321 ATGTGAGA 8mer-A1 dme-miR-1003-3p 3R + 22078809 22078862 3'utr how FlyBase G33692.1 GTATACAGAAACTCTGTTGAAATTATTCTGCGAAATGTGAGACTTATACTCAGA 25 22078846 0.964281605 4 25 135 1 1.51851394 0.03030303 0.24 0.424242424 25 0 0 33 3R:22078809-22078862 8 24.5 2496 FBgn0264491 669.8 25.87 39.62333333 0.036578083 0.947042907 0.618322537 -3 -3 -3 0.2 dme-miR-1012-3p 7mer-m8 TTGACTA 3R 22364500 22364506 + 3R_22364500_22364506_+ 0.630780383 0.630774609 0.630777496 4.10E-06 Muted FBtr0110878|FBtr0344526 22363523|22363523 22364580|22364580 3R + 22364474 22364535 stop_codon Muted FlyBase G44628.1 TCAAGTCCAGACATTGAAACCCCATGTTGACTAGATAGATGATCTGCGAGTAAAAATCGTTC 8 22364513 0.977173596 2 7 51 1 1.079181246 0 0.375 0.583333333 8 0 0 12 3R:22364474-22364535 7 Muted FBtr0344526|FBtr0110878 22363523|22363523 22364580|22364580 TTGACTA 7mer-m8 dme-miR-1012-3p 3R + 22364466 22364524 stop_codon Muted FlyBase G33710.1 GAGGGAAGTCAAGTCCAGACATTGAAACCCCATGTTGACTAGATAGATGATCTGCGAGT 9 22364513 0.957884778 5 9 44 1 1.113943352 0.153846154 0.444444444 0.615384615 9 0 0 13 3R:22364466-22364524 7 7 2497 FBgn0083967 164.1666667 13.59 20.94666667 0.042639594 0.515084621 0.33418205 -13 -13 -13 0.2 dme-miR-184-3p 7mer-m8 TCCGTCC 3R 22418799 22418805 + 3R_22418799_22418805_+ 0.660959238 0.636290733 0.648624986 0.017443264 lqfR FBtr0299515 22418577 22419051 3R + 22418774 22418829 3'utr lqfR FlyBase G44679.1 CCGGATCAAACCCATTAATTCCACATCCGTCCTGATCGTCCACTCGGAATTTGAAA 51 22418806 0.968644362 7 46 328 0.918032787 1.447158031 0.180327869 0.117647059 0.262295082 51 4 1 56 3R:22418774-22418829 7 lqfR FBtr0299515 22418577 22419051 TCCGTCC 7mer-m8 dme-miR-184-3p 3R + 22418788 22418826 3'utr lqfR FlyBase G33751.1 TTAATTCCACATCCGTCCTGATCGTCCACTCGGAATTTG 24 22418806 0.713692323 4 21 148 0.842105263 1.505149978 0.131578947 0.458333333 0.657894737 24 6 0 32 3R:22418788-22418826 7 37 2498 FBgn0261279 676.23 25.48666667 39.00333333 0.054715112 1.451739472 0.948636869 -7 -7 -7 0.2 dme-miR-11-3p 7mer-m1 TGTGATG 3R 22422748 22422754 + 3R_22422748_22422754_+ 0.364747593 0.465140549 0.414944071 0.0709885 mats FBtr0084229|FBtr0345205|FBtr0337044 22422673|22422673|22422673 22422846|22422846|22423302 3R + 22422674 22422802 3'utr mats FlyBase G44686.1 GGAATCACTGCATGGAGCCGCGAATTTTCGCGATTCCGGCGGCGGTGGTGGTGGTCTGCGCTTGCAGTTGGACTTGTGATGAAAGCGCTCTGGCAGACTCGTGTATTACGCTTTAGTTAGTTACCGCCA 98 22422747 0.97055308 19 92 744 0.928571429 1.539912085 0.303571429 0.12244898 0.232142857 98 6 2 104 3R:22422674-22422802 7 mats FBtr0084229|FBtr0345205|FBtr0337044 22422673|22422673|22422673 22422846|22422846|22423302 TGTGATG 7mer-m1 dme-miR-11-3p 3R + 22422700 22422795 3'utr mats FlyBase G33759.1 TTCGCGATTCCGGCGGCGGTGGTGGTGGTCTGCGCTTGCAGTTGGACTTGTGATGAAAGCGCTCTGGCAGACTCGTGTATTACGCTTTAGTTAGTT 78 22422747 0.779046785 15 74 549 0.937007874 1.598425707 0.417322835 0.41025641 0.637795276 78 6 2 119 3R:22422700-22422795 7 63.5 2499 FBgn0038965 132.6666667 9.696666667 14.72333333 0.478643216 6.548642145 4.312882047 1 1 1 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 22460604 22460610 + 3R_22460604_22460610_+ 0.758302394 0.758544857 0.758423625 0.000171473 CG34376 FBtr0112609 22460499 22460749 3R + 22460515 22460626 3'utr CG34376 FlyBase G44706.1 AAATAGCAGGTCAAATGACAGTTAAGTACAAAAGTGGAATGATTGCAATAATACTCAAATACACTAAAGACGGCGTAACCAAAACAATTCCAAAGAATTTAGTTAATACATA 54 22460602 0.889745512 6 53 297 0.983050847 1.462397998 0.06779661 0.074074074 0.152542373 54 0 1 58 3R:22460515-22460626 7 CG34376 FBtr0112609 22460499 22460749 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 22460567 22460630 3'utr CG34376 FlyBase G33775.1 ACTCAAATACACTAAAGACGGCGTAACCAAAACAATTCCAAAGAATTTAGTTAATACATAATAA 24 22460602 0.969706051 2 23 129 0.974358974 1.579783597 0 0.5 0.692307692 24 1 0 38 3R:22460567-22460630 7 31.5 2500 FBgn0085405 134.82 6.636666667 10.25333333 0.23364486 4.746358614 3.072171651 2 2 2 0.2 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 22460697 22460704 + 3R_22460697_22460704_+ 0.563828405 0.564110045 0.563969225 0.000199121 CG34376 FBtr0112609 22460499 22460749 3R + 22460672 22460727 3'utr CG34376 FlyBase G44707.1 TCGTTTTTATTATTGTACGTTGCATTAGCTTTACACTGTAATAAATGTTGAATTTG 13 22460696 0.913471599 2 11 128 0.882352941 0.698970004 0.588235294 0.230769231 0.411764706 13 0 2 15 3R:22460672-22460727 8 CG34376 FBtr0112609 22460499 22460749 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R + 22460670 22460712 3'utr CG34376 FlyBase G33776.1 TATCGTTTTTATTATTGTACGTTGCATTAGCTTTACACTGTAA 10 22460696 0.98369017 2 10 82 1 1.079181246 0.333333333 0.2 0.333333333 10 0 0 12 3R:22460670-22460712 8 10.5 2501 FBgn0085405 134.82 6.636666667 10.25333333 0.07788162 1.582119538 1.024057217 1 1 1 0.2 dme-miR-1006-3p 7mer-A1 GAATTTA 3R 22464083 22464089 + 3R_22464083_22464089_+ 0.821682323 0.820978349 0.821330336 0.000497803 AP-2mu FBtr0084253|FBtr0301866|FBtr0084252 22464039|22464039|22464039 22464603|22464603|22464603 3R + 22464068 22464106 5'utr AP-2mu FlyBase G44715.1 AAGATTATCACAATTGAATTTAACGAGATGAATGGAGAA 6 22464082 0.727082637 3 4 36 0.875 0.84509804 0.25 0.333333333 0.5 6 1 0 7 3R:22464068-22464106 7 AP-2mu FBtr0301866|FBtr0084252|FBtr0084253 22464039|22464039|22464039 22464603|22464603|22464603 GAATTTA 7mer-A1 dme-miR-1006-3p 3R + 22464048 22464098 5'utr AP-2mu FlyBase G33781.1 AAGCATCCCCATCACGGAGCAAGATTATCACAATTGAATTTAACGAGATGA 6 22464072 0.965656417 4 6 31 1 1.041392685 0.090909091 0.5 0.727272727 6 0 0 11 3R:22464048-22464098 7 5 2502 FBgn0263351 730.8 44.74666667 67.98333333 0.006841817 0.111740167 0.073547438 1 11 6 0.2 dme-miR-283-5p 7mer-m8 TGATATT 3R 22464543 22464549 + 3R_22464543_22464549_+ 0.511993714 0.609397553 0.560695633 0.068874958 AP-2mu FBtr0084253|FBtr0301866|FBtr0084252 22464039|22464039|22464039 22464603|22464603|22464603 3R + 22464523 22464597 3'utr AP-2mu FlyBase G44719.1 TCTGTCAGCGCTATCAATATTGATATTCAAGTGTTAATAATATTCGAATTGTTTAATAAATAAATTAGCATGATA 29 22464542 0.974462635 3 27 254 0.942857143 1.51851394 0.457142857 0.206896552 0.342857143 29 2 0 33 3R:22464523-22464597 7 AP-2mu FBtr0301866|FBtr0084252|FBtr0084253 22464039|22464039|22464039 22464603|22464603|22464603 TGATATT 7mer-m8 dme-miR-283-5p 3R + 22464513 22464561 3'utr AP-2mu FlyBase G33784.2 AGACCAAAACTCTGTCAGCGCTATCAATATTGATATTCAAGTGTTAATA 15 22464542 0.747257157 5 13 125 0.956521739 1.342422681 0.304347826 0.4 0.608695652 15 1 0 22 3R:22464513-22464561 7 19.5 2503 FBgn0263351 730.8 44.74666667 67.98333333 0.026683087 0.435786651 0.286835009 1 1 1 0.2 dme-miR-932-5p 7mer-A1 GAATTGA 3R 22608087 22608093 + 3R_22608087_22608093_+ 0.812825664 0.823316128 0.818070896 0.007417833 Efa6 FBtr0334560|FBtr0113396|FBtr0113395|FBtr0302187|FBtr0334559 22605937|22607217|22607217|22606893|22607217 22608471|22608471|22608471|22608842|22608471 3R + 22608024 22608122 3'utr Efa6 FlyBase G44766.1 AATGAACAATATCTCTACACAACCACAAGATGGAGAACATCGGCAGTAACAATAACGAAATGAGAATTGAGAAGAGGACAAGCGCATTAGCATTAAGCT 23 22608090 0.749156598 9 22 62 1 1.431363764 0.222222222 0.130434783 0.259259259 23 0 0 27 3R:22608024-22608122 7 Efa6 FBtr0113396|FBtr0113395|FBtr0302187|FBtr0334559|FBtr0334560 22607217|22607217|22606893|22607217|22605937 22608471|22608471|22608842|22608471|22608471 GAATTGA 7mer-A1 dme-miR-932-5p 3R + 22608076 22608107 3'utr Efa6 FlyBase G33821.1 TAACGAAATGAGAATTGAGAAGAGGACAAGCG 6 22608090 0.796929093 3 6 13 1 1 0.8 0.5 0.7 6 0 0 10 3R:22608076-22608107 7 8 2504 FBgn0051158 976.3733333 19.19333333 29.44333333 0.008193587 0.416811393 0.271708366 -3 -3 -3 0.2 dme-miR-1003-3p 6mer3-8 ATGTGA 3R 22608670 22608675 + 3R_22608670_22608675_+ 0.9489103 0.976348376 0.962629338 0.019401667 Efa6 FBtr0302187 22606893 22608842 3R + 22608632 22608719 3'utr Efa6 FlyBase G44769.1 AGGGAAACAAGAAGACGAACGTGGAGACGGTGATTTTTATGTGAACATTTATTACTAACTGATAAGCTTTGATTAAACTTAGGAAAGC 25 22608666 0.982650419 7 24 180 0.939393939 1.491361694 0 0.2 0.393939394 25 2 0 31 3R:22608632-22608719 6 Efa6 FBtr0302187 22606893 22608842 ATGTGA 6mer3-8 dme-miR-1003-3p 3R + 22608641 22608681 3'utr Efa6 FlyBase G33823.1 AGAAGACGAACGTGGAGACGGTGATTTTTATGTGAACATTT 15 22608667 0.902985717 4 15 101 1 1.278753601 0 0.266666667 0.421052632 15 0 0 19 3R:22608641-22608681 6 5 2505 FBgn0051158 976.3733333 19.19333333 29.44333333 0.005120992 0.260507121 0.169817729 4 3 3.5 0.2 dme-miR-14-3p 7mer-A1 AGACTGA 3R 22681901 22681907 + 3R_22681901_22681907_+ 0.738455642 0.758219183 0.748337412 0.013974976 wake FBtr0344409|FBtr0344403|FBtr0344405|FBtr0344407|FBtr0344408|FBtr0344406|FBtr0344404 22681578|22681578|22681578|22681578|22681578|22681578|22681578 22682176|22682176|22683827|22682176|22682176|22682176|22682176 3R + 22681880 22681923 3'utr wake FlyBase G44782.1 TCGTTGACCAATTCCAGAATTAGACTGAATTACTTATGTATGCT 170 22681899 0.842890564 7 166 1175 0.971962617 2.318063335 0.08411215 0.223529412 0.38317757 170 6 0 208 3R:22681880-22681923 7 wake FBtr0344408|FBtr0344406|FBtr0344404|FBtr0344409|FBtr0344403|FBtr0344405|FBtr0344407 22681578|22681578|22681578|22681578|22681578|22681578|22681578 22682176|22682176|22682176|22682176|22682176|22683827|22682176 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 22681879 22681941 3'utr wake FlyBase G33830.1 ATCGTTGACCAATTCCAGAATTAGACTGAATTACTTATGTATGCTGCAATGGCAAACTGATGA 104 22681899 0.980325128 7 101 715 0.981012658 1.889301703 0.139240506 0.375 0.588607595 104 2 1 155 3R:22681879-22681941 7 135.5 2506 FBgn0266418 402.2066667 8.453333333 12.89666667 0.336891482 16.02917981 10.50659085 2 2 2 0.2 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3R 22731169 22731174 + 3R_22731169_22731174_+ 0.981181885 0.839541062 0.910361473 0.10015517 CG45049 FBtr0344360|FBtr0344361|FBtr0344359 22730106|22730106|22730106 22732362|22732362|22732362 3R + 22731144 22731188 3'utr CG45049 FlyBase G44806.1 CGCAACTGACAGCAATAAAAACGTTTTTGACACCTTTTGTTAACA 14 22731170 0.648597243 5 11 94 0.8 1.079181246 0 0.071428571 0.133333333 14 3 0 12 3R:22731144-22731188 6 CG45049 FBtr0344360|FBtr0344359|FBtr0344361 22730106|22730106|22730106 22732362|22732362|22732362 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3R + 22731132 22731183 3'utr CG45049 FlyBase G33849.1 AAACATATCACACGCAACTGACAGCAATAAAAACGTTTTTGACACCTTTTGT 7 22731159 0.984734749 4 6 45 0.777777778 0.84509804 0.111111111 0.285714286 0.444444444 7 2 0 7 3R:22731132-22731183 6 9.5 2507 FBgn0266409 707.48 41.45666667 63.71333333 0.013427941 0.229154941 0.149105368 -1 10 4.5 0.2 dme-miR-305-5p 7mer-A1 GTACAAA 3R 22734034 22734040 - 3R_22734034_22734040_- 0.711355843 0.721315294 0.716335568 0.00704243 Dcr-1 FBtr0084324 22734005 22734108 3R - 22734027 22734064 3'utr Dcr-1 FlyBase G53522.1 TTTTTAGACATAAGAACTTTAATTGTACAAATCTTAAA 11 22734042 0.759029527 3 11 110 1 1.041392685 0 0 0 11 0 0 11 3R:22734027-22734064 7 Dcr-1 FBtr0084324 22734005 22734108 GTACAAA 7mer-A1 dme-miR-305-5p 3R - 22734006 22734064 3'utr Dcr-1 FlyBase G40449.1 TTTTTAGACATAAGAACTTTAATTGTACAAATCTTAAATAGATTGTCTATGGTCGAATA 14 22734042 0.985401633 5 14 130 1 1.301029996 0 0.285714286 0.5 14 0 0 20 3R:22734006-22734064 7 11.5 2508 FBgn0039016 718.3333333 12.47 19.05666667 0.016009281 0.922213312 0.603463355 2 2 2 0.2 dme-miR-92b-3p 6mer2-7 TGCAAT 3R 22734092 22734097 - 3R_22734092_22734097_- 0.902478278 0.949052018 0.925765148 0.032932579 Dcr-1 FBtr0084324 22734005 22734108 3R - 22734068 22734137 stop_codon Dcr-1 FlyBase G53523.1 AGCAGGGCTTGATAGCCAAAAAAGACTAAGAAGTCATCGCTGCAATCGTGTTTCATTAGATTTAATGATT 18 22734086 0.920577005 8 17 146 0.95 1.278753601 0.2 0.055555556 0.15 18 1 0 19 3R:22734068-22734137 6 Dcr-1 FBtr0084324 22734005 22734108 TGCAAT 6mer2-7 dme-miR-92b-3p 3R - 22734068 22734181 stop_codon Dcr-1 FlyBase G40450.1 TGCCAAGTGCACGGCGGCCAAATGCGCATTGCGCCAACTCAAAAAGCAGGGCTTGATAGCCAAAAAAGACTAAGAAGTCATCGCTGCAATCGTGTTTCATTAGATTTAATGATT 19 22734083 0.986918323 8 16 138 0.807692308 0.720159303 0.153846154 0.315789474 0.5 19 2 3 21 3R:22734068-22734181 6 10 2509 FBgn0039016 718.3333333 12.47 19.05666667 0.013921114 0.801924619 0.524750743 -11 -14 -12.5 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 22793921 22793926 + 3R_22793921_22793926_+ 0.623950328 0.84725686 0.735603594 0.157901611 CG7029 FBtr0310037|FBtr0113271|FBtr0344297|FBtr0084312|FBtr0310038|FBtr0113270 22792678|22792678|22792678|22792678|22792678|22792678 22794030|22794030|22794030|22794030|22794030|22794030 3R + 22793849 22793959 3'utr CG7029 FlyBase G44849.1 TGTATAGCTACTCTTATTGTATTATGTACAAGCGGACGAAACACATATTATAGATTTGCGGGAGAATTTATCACCAAATGGATATGCGGGAGTATATTATGTATTAAAACG 26 22793931 0.902254448 13 25 173 0.962962963 1.113943352 0.259259259 0.038461538 0.074074074 26 0 1 26 3R:22793849-22793959 6 CG7029 FBtr0310038|FBtr0113270|FBtr0344297|FBtr0084312|FBtr0310037|FBtr0113271 22792678|22792678|22792678|22792678|22792678|22792678 22794030|22794030|22794030|22794030|22794030|22794030 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 22793911 22793956 3'utr CG7029 FlyBase G33878.2 AGAATTTATCACCAAATGGATATGCGGGAGTATATTATGTATTAAA 10 22793931 0.980977883 5 8 48 1 1.176091259 0 0.4 0.6 10 0 0 15 3R:22793911-22793956 6 10.5 2510 FBgn0039026 1187.603333 21.31 32.52666667 0.008841336 0.49272642 0.322812052 -10 -10 -10 0.2 dme-miR-305-5p 7mer-A1 GTACAAA 3R 23049704 23049710 - 3R_23049704_23049710_- 0.782406926 0.782668521 0.782537723 0.000184979 p53 FBtr0345262|FBtr0084360|FBtr0301765|FBtr0084359 23049655|23049655|23049655|23049655 23049964|23049964|23049964|23049964 3R - 23049682 23049726 3'utr p53 FlyBase G53557.1 ACAACAAACATACTCTGTACAAAAAAGCCAAAAGTGAATTTATTA 11 23049712 0.724762631 4 11 37 1 1.041392685 0 0 0 11 0 0 11 3R:23049682-23049726 7 p53 FBtr0301765|FBtr0084359|FBtr0345262|FBtr0084360 23049655|23049655|23049655|23049655 23049964|23049964|23049964|23049964 GTACAAA 7mer-A1 dme-miR-305-5p 3R - 23049664 23049726 3'utr p53 FlyBase G40468.1 ACAACAAACATACTCTGTACAAAAAAGCCAAAAGTGAATTTATTAAAGAGTTGTCATATTTTG 8 23049712 0.936389874 6 8 31 1 1.041392685 0.181818182 0.25 0.454545455 8 0 0 11 3R:23049664-23049726 7 7.5 2511 FBgn0039044 93.11333333 6.436666667 9.84 0.080547004 1.165199379 0.762195122 2 2 2 0.2 dme-miR-283-5p 7mer-m8 TGATATT 3R 23049831 23049837 - 3R_23049831_23049837_- 0.620175014 0.619322448 0.619748731 0.000602879 p53 FBtr0345262|FBtr0084360|FBtr0301765|FBtr0084359 23049655|23049655|23049655|23049655 23049964|23049964|23049964|23049964 3R - 23049797 23049986 stop_codon p53 FlyBase G53559.1 ACGTGCCTACGAGCTGCCATGACTTCTGATCTGGTCGACAATCTCCCAGGTATCAGATACCTTTGAAATGTGTTGCATCTGTGGGGTATACTACATAGCTATTAGTATCTTAAGTTTGTATTAGTCCTTGTTCGTAAGGCGTTTAACGGTGATATTCCCCTTTTGGCATGTTCGATGGCCGAAAAGAAAA 127 23049832 0.976635608 29 120 1008 0.957055215 1.716003344 0.233128834 0.204724409 0.380368098 127 5 2 156 3R:23049797-23049986 7 p53 FBtr0301765|FBtr0084359|FBtr0345262|FBtr0084360 23049655|23049655|23049655|23049655 23049964|23049964|23049964|23049964 TGATATT 7mer-m8 dme-miR-283-5p 3R - 23049819 23049918 3'utr p53 FlyBase G40469.1 TGTGTTGCATCTGTGGGGTATACTACATAGCTATTAGTATCTTAAGTTTGTATTAGTCCTTGTTCGTAAGGCGTTTAACGGTGATATTCCCCTTTTGGCA 52 23049832 0.742390358 13 49 419 0.921052632 1.544068044 0.223684211 0.346153846 0.552631579 52 5 1 70 3R:23049819-23049918 7 56.5 2512 FBgn0039044 93.11333333 6.436666667 9.84 0.606787428 8.777835318 5.741869919 -5 -5 -5 0.2 dme-miR-14-3p 6mer3-8 AAGACT 3R 23114369 23114374 - 3R_23114369_23114374_- 0.999713307 0.999862859 0.999788083 0.000105783 Rassf FBtr0084407 23114012 23114672 3R - 23114347 23114394 3'utr Rassf FlyBase G53574.1 CATTCGTTTAGAAAGCGTTTAAGACTTGTAACTAACCAAAAAATAATT 14 23114376 0.980246234 4 13 96 0.947368421 1.255272505 0.157894737 0.214285714 0.421052632 14 1 0 18 3R:23114347-23114394 6 Rassf FBtr0084407 23114012 23114672 AAGACT 6mer3-8 dme-miR-14-3p 3R - 23114323 23114409 3'utr Rassf FlyBase G40479.1 AATTCCAGGCATTTCCATTCGTTTAGAAAGCGTTTAAGACTTGTAACTAACCAAAAAATAATTATTAATCCACAACATTACCATACA 19 23114376 0.98397587 8 18 138 0.964285714 1.130333768 0.178571429 0.421052632 0.607142857 19 0 1 27 3R:23114323-23114409 6 15 2513 FBgn0039055 618.9666667 21.53666667 33.01666667 0.024233938 0.696486612 0.454316002 2 2 2 0.2 dme-miR-305-5p 7mer-m1 GTACAAT 3R 23123990 23123996 - 3R_23123990_23123996_- 0.760190166 0.764857049 0.762523607 0.003299926 CG31365 FBtr0084406 23123960 23124296 3R - 23123971 23124006 3'utr CG31365 FlyBase G53587.1 ATAAGACGATGTACAATTTTATAGGCAAATATACGT 5 23123997 0.976482437 3 5 32 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:23123971-23124006 7 CG31365 FBtr0084406 23123960 23124296 GTACAAT 7mer-m1 dme-miR-305-5p 3R - 23123971 23124014 3'utr CG31365 FlyBase G40491.1 AATACCACATAAGACGATGTACAATTTTATAGGCAAATATACGT 13 23123990 0.633657946 4 11 86 0.75 1.176091259 0 0.461538462 0.65 13 5 0 15 3R:23123971-23124014 7 8.5 2514 FBgn0051365 445.6766667 23.35333333 35.95666667 0.019072123 0.363973737 0.236395661 1 -6 -2.5 0.2 dme-miR-970-3p 7mer-m8 TCTTATG 3R 23124001 23124007 + 3R_23124001_23124007_+ 0.409498077 0.491077715 0.450287896 0.057685488 CenB1A FBtr0084369|FBtr0084368 23123628|23123628 23124217|23124217 3R + 23123971 23124025 3'utr CenB1A FlyBase G44878.1 ACGTATATTTGCCTATAAAATTGTACATCGTCTTATGTGGTATTTATTAAACGAT 7 23124003 0.991194347 5 6 68 0.9 0.954242509 0.2 0.428571429 0.6 7 1 0 9 3R:23123971-23124025 7 CenB1A FBtr0084369|FBtr0084368 23123628|23123628 23124217|23124217 TCTTATG 7mer-m8 dme-miR-970-3p 3R + 23123981 23124018 3'utr CenB1A FlyBase G33900.1 GCCTATAAAATTGTACATCGTCTTATGTGGTATTTATT 5 23124004 0.988207458 3 5 52 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:23123981-23124018 7 5 2515 FBgn0039056 579.2733333 23.55666667 35.98 0.008631504 0.212254139 0.138966092 -2 -3 -2.5 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3R 23151617 23151623 - 3R_23151617_23151623_- 0.409049382 0.442846393 0.425947887 0.023898088 unk FBtr0084402|FBtr0305573|FBtr0337052 23151562|23150239|23149651 23153939|23153939|23153939 3R - 23151574 23151647 3'utr unk FlyBase G53602.1 ACGCTACTGTAAGAGTGATTTTTATGTGATTTTGAAACTACTTGAATATGTGATCCAGAAATATATAAAAAACA 18 23151628 0.971416864 8 18 158 1 1.342422681 0.363636364 0.222222222 0.363636364 18 0 0 22 3R:23151574-23151647 7 unk FBtr0305573|FBtr0337052|FBtr0084402 23150239|23149651|23151562 23153939|23153939|23153939 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 23151611 23151647 3'utr unk FlyBase G40506.1 ACGCTACTGTAAGAGTGATTTTTATGTGATTTTGAAA 16 23151616 0.775366016 7 14 167 0.896551724 1.113943352 0.275862069 0.625 0.793103448 16 2 1 26 3R:23151611-23151647 7 9 2516 FBgn0004395 913.0833333 29.83666667 45.42666667 0.009856713 0.301642275 0.198121515 5 -7 -1 0.2 dme-miR-8-3p 6mer2-7 AGTATT 3R 23152636 23152641 - 3R_23152636_23152641_- 0.999318711 0.919709563 0.959514137 0.056292134 unk FBtr0305572|FBtr0084402|FBtr0305571|FBtr0305573|FBtr0337052 23152090|23151562|23152090|23150239|23149651 23153939|23153939|23153939|23153939|23153939 3R - 23152630 23152714 3'utr unk FlyBase G53606.1 TTTACTTTCATAGTCTCAACTGGACGCTTCCAAATTAGTAAAAGCATAAAATGAATCGTCAATGTCAAAACGTAGTATTTAAGTC 10 23152663 0.952063577 8 9 73 1 1.079181246 0 0.2 0.333333333 10 0 0 12 3R:23152630-23152714 6 unk FBtr0305573|FBtr0337052|FBtr0305571|FBtr0305572|FBtr0084402 23150239|23149651|23152090|23152090|23151562 23153939|23153939|23153939|23153939|23153939 AGTATT 6mer2-7 dme-miR-8-3p 3R - 23152630 23152672 3'utr unk FlyBase G40509.1 AGCATAAAATGAATCGTCAATGTCAAAACGTAGTATTTAAGTC 5 23152635 0.962851323 4 5 28 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:23152630-23152672 6 3 2517 FBgn0004395 913.0833333 29.83666667 45.42666667 0.003285571 0.100547425 0.066040505 22 -6 8 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3R 23152762 23152768 - 3R_23152762_23152768_- 0.520855436 0.521068006 0.520961721 0.000150331 unk FBtr0305572|FBtr0084402|FBtr0305571|FBtr0305573|FBtr0337052 23152090|23151562|23152090|23150239|23149651 23153939|23153939|23153939|23153939|23153939 3R - 23152725 23152793 3'utr unk FlyBase G53607.1 ACGTATATAATCTATTAGGTTACTTTGTGATTTGAATAGTGCTTTAAGTACTTACTTTGCAGATGACTT 63 23152762 0.992289151 12 60 681 0.952941176 1.306425028 0.082352941 0.253968254 0.447058824 63 1 3 81 3R:23152725-23152793 7 unk FBtr0305573|FBtr0337052|FBtr0305571|FBtr0305572|FBtr0084402 23150239|23149651|23152090|23152090|23151562 23153939|23153939|23153939|23153939|23153939 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 23152728 23152793 3'utr unk FlyBase G40511.1 ACGTATATAATCTATTAGGTTACTTTGTGATTTGAATAGTGCTTTAAGTACTTACTTTGCAGATGA 47 23152762 0.991115233 9 45 476 0.97260274 1.550228353 0.054794521 0.340425532 0.575342466 47 1 1 71 3R:23152728-23152793 7 53.5 2518 FBgn0004395 913.0833333 29.83666667 45.42666667 0.05859268 1.793095743 1.177722336 -6 -6 -6 0.2 dme-miR-1012-3p 7mer-m8 TTGACTA 3R 23153237 23153243 - 3R_23153237_23153243_- 0.629562238 0.509709575 0.569635906 0.084748586 unk FBtr0305572|FBtr0084402|FBtr0084403|FBtr0305571|FBtr0305573|FBtr0337052 23152090|23151562|23153040|23152090|23150239|23149651 23153939|23153939|23153939|23153939|23153939|23153939 3R - 23153224 23153262 3'utr unk FlyBase G53610.1 TTCTAGACACTTTTAGCAATTGACTATTAACAAATTTAT 23 23153236 0.754473532 5 22 188 0.967741935 1.176091259 0 0.347826087 0.516129032 23 0 1 30 3R:23153224-23153262 7 unk FBtr0305573|FBtr0337052|FBtr0084403|FBtr0305571|FBtr0305572|FBtr0084402 23150239|23149651|23153040|23152090|23152090|23151562 23153939|23153939|23153939|23153939|23153939|23153939 TTGACTA 7mer-m8 dme-miR-1012-3p 3R - 23153224 23153254 3'utr unk FlyBase G40514.1 ACTTTTAGCAATTGACTATTAACAAATTTAT 17 23153236 0.854580238 4 17 131 1 1.491361694 0.032258065 0.588235294 0.774193548 17 0 0 31 3R:23153224-23153254 7 20 2519 FBgn0004395 913.0833333 29.83666667 45.42666667 0.021903806 0.670316166 0.440270032 -7 -7 -7 0.2 dme-miR-283-5p 8mer-A1 TGATATTA 3R 23185294 23185301 + 3R_23185294_23185301_+ 0.56406445 0.558709406 0.561386928 0.003786557 Irk1 FBtr0336479|FBtr0336475|FBtr0336478|FBtr0336476|FBtr0336474|FBtr0336473|FBtr0336477 23184958|23184958|23184958|23184958|23184958|23184958|23184958 23185642|23185562|23185642|23185562|23185642|23185642|23185642 3R + 23185091 23185409 3'utr Irk1 FlyBase G44901.1 GAGCTGCTGCAGCTGTGAACATCCCTCAAAAAAATCCCCCTATCCTGCTGAAGTGGAGGCAATCTGATTGTTATCCACCTATCTACTATACTTACTACTAACCCTGAAACGATTGTACATGTTTATGTCTAGGCTAAGCTGATGAATGATTCACGTTGTTAGCTTTAGCTTTGTGTTGAATTTACTATAGTTAAGTTACAAATTGATATTAACGCAAAGTAAGATGTGAGACCCAGAAACCAAAATGCTGCAACTTAGACAACTAGATAAGTCATTAAACGGCTCACTTAACATGAAATTTATGCGAAGACGCAGCGGA 424 23185293 0.979824116 55 406 2960 0.951219512 1.859909919 0.234521576 0.198113208 0.362101313 424 20 6 507 3R:23185091-23185409 8 Irk1 FBtr0336474|FBtr0336473|FBtr0336477|FBtr0336479|FBtr0336475|FBtr0336478|FBtr0336476 23184958|23184958|23184958|23184958|23184958|23184958|23184958 23185642|23185642|23185642|23185642|23185562|23185642|23185562 TGATATTA 8mer-A1 dme-miR-283-5p 3R + 23185172 23185369 3'utr Irk1 FlyBase G33921.2 TCTACTATACTTACTACTAACCCTGAAACGATTGTACATGTTTATGTCTAGGCTAAGCTGATGAATGATTCACGTTGTTAGCTTTAGCTTTGTGTTGAATTTACTATAGTTAAGTTACAAATTGATATTAACGCAAAGTAAGATGTGAGACCCAGAAACCAAAATGCTGCAACTTAGACAACTAGATAAGTCATTAAA 206 23185293 0.976004611 35 197 1511 0.961805556 1.965358514 0.239583333 0.291262136 0.493055556 206 9 2 277 3R:23185172-23185369 8 120 2520 FBgn0265042 1730.336667 66.08666667 101.7066667 0.069350666 1.815797438 1.17986366 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 23187025 23187031 - 3R_23187025_23187031_- 0.615676519 0.610174201 0.61292536 0.003890714 cnc FBtr0306755|FBtr0306755|FBtr0306755|FBtr0308226|FBtr0308226|FBtr0308226|FBtr0330372|FBtr0330372|FBtr0330372|FBtr0306744|FBtr0306744|FBtr0306744|FBtr0306747|FBtr0306747|FBtr0306747|FBtr0308227|FBtr0308227|FBtr0308227|FBtr0306752|FBtr0306752|FBtr0306752|FBtr0306754|FBtr0306754|FBtr0306754|FBtr0306751|FBtr0306751|FBtr0306751|FBtr0306749|FBtr0306749|FBtr0306749|FBtr0306745|FBtr0306745|FBtr0306745|FBtr0306746|FBtr0306746|FBtr0306746|FBtr0336455|FBtr0336455|FBtr0336455|FBtr0306750|FBtr0306750|FBtr0306750|FBtr0306748|FBtr0306748|FBtr0306748|FBtr0306753|FBtr0306753|FBtr0306753 23185578|23185578|23185578|23186410|23186410|23186410|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23186410|23186410|23186410|23186410|23186410|23186410|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578 23187443|23187443|23187443|23187443|23187443|23187443|23187302|23187302|23187302|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443 3R - 23186980 23187085 3'utr cnc FlyBase G53625.1 TGGACAGCGTATGCGAAGCCTTTTACTTAATTGCAATTAATGAAAAACAAAACTTGTGATAAAACAGCTCTTTTACTCCGAAATATTTGCGCCCCAAAGGTCAAGC 77 23187032 0.856437025 8 72 370 0.954022989 1.618048097 0.103448276 0.12987013 0.229885057 77 3 1 83 3R:23186980-23187085 7 cnc FBtr0306751|FBtr0306751|FBtr0306751|FBtr0336455|FBtr0336455|FBtr0336455|FBtr0306748|FBtr0306748|FBtr0306748|FBtr0306746|FBtr0306746|FBtr0306746|FBtr0306752|FBtr0306752|FBtr0306752|FBtr0306750|FBtr0306750|FBtr0306750|FBtr0306754|FBtr0306754|FBtr0306754|FBtr0306749|FBtr0306749|FBtr0306749|FBtr0306745|FBtr0306745|FBtr0306745|FBtr0306753|FBtr0306753|FBtr0306753|FBtr0306747|FBtr0306747|FBtr0306747|FBtr0308226|FBtr0308226|FBtr0308226|FBtr0306744|FBtr0306744|FBtr0306744|FBtr0308227|FBtr0308227|FBtr0308227|FBtr0306755|FBtr0306755|FBtr0306755|FBtr0330372|FBtr0330372|FBtr0330372 23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23186410|23186410|23186410|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23186410|23186410|23186410|23185578|23185578|23185578|23186410|23186410|23186410|23185578|23185578|23185578|23185578|23185578|23185578 23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187302|23187302|23187302 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 23186975 23187133 3'utr cnc FlyBase G40531.1 TGATTATTTGGACTCGTCCAAGTCCGTCTTGCATGGTGTTGTCCCTTCTGGACAGCGTATGCGAAGCCTTTTACTTAATTGCAATTAATGAAAAACAAAACTTGTGATAAAACAGCTCTTTTACTCCGAAATATTTGCGCCCCAAAGGTCAAGCTGACA 59 23187032 0.966387214 14 57 307 0.975308642 1.596597096 0.098765432 0.322033898 0.50617284 59 1 1 79 3R:23186975-23187133 7 53.5 2521 FBgn0262975 1286.603333 24.08333333 36.96666667 0.041582358 2.221453287 1.447249775 1 1 1 0.2 dme-miR-12-5p 7mer-A1 ATACTCA 3R 23254478 23254484 + 3R_23254478_23254484_+ 0.726099991 0.744608073 0.735354032 0.013087203 EloA FBtr0084374|FBtr0084375 23254447|23254447 23255071|23255071 3R + 23254447 23254564 stop_codon EloA FlyBase G44911.1 AGATGCGCTTACTCATTATAGCTACAATCTTATACTCAACTTCTTCAGCGACAACTTAAGCAGCAGCAGTAGCAGCAACCTCGATCTATTAGGCATTCACGGTGGGATTACCTTCCAA 42 23254476 0.978661593 11 41 287 0.97826087 1.653212514 0.195652174 0.095238095 0.173913043 42 1 0 45 3R:23254447-23254564 7 EloA FBtr0084374|FBtr0084375 23254447|23254447 23255071|23255071 ATACTCA 7mer-A1 dme-miR-12-5p 3R + 23254441 23254565 stop_codon EloA FlyBase G33929.1 AACGATAGATGCGCTTACTCATTATAGCTACAATCTTATACTCAACTTCTTCAGCGACAACTTAAGCAGCAGCAGTAGCAGCAACCTCGATCTATTAGGCATTCACGGTGGGATTACCTTCCAAC 30 23254476 0.982136022 9 27 196 0.916666667 1.166331422 0.125 0.4 0.625 30 2 2 44 3R:23254441-23254565 7 20 2522 FBgn0039066 571.72 24.26333333 37.16333333 0.034982159 0.824289051 0.538164858 2 2 2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 23254605 23254611 + 3R_23254605_23254611_+ 0.801791519 0.801398834 0.801595176 0.000277681 EloA FBtr0084374|FBtr0084374|FBtr0084374|FBtr0084375|FBtr0084375|FBtr0084375 23254447|23254447|23254447|23254447|23254447|23254447 23255071|23255071|23255071|23255071|23255071|23255071 3R + 23254588 23254644 3'utr EloA FlyBase G44912.1 TCTGAATAAAGTGACATTGTGATACTAGACCTTCTACTTCCCAGTGCGCTGTGGAAT 30 23254604 0.652152423 5 28 193 0.918918919 1.054357662 0.135135135 0.133333333 0.297297297 30 1 2 34 3R:23254588-23254644 7 EloA FBtr0084374|FBtr0084374|FBtr0084374|FBtr0084375|FBtr0084375|FBtr0084375 23254447|23254447|23254447|23254447|23254447|23254447 23255071|23255071|23255071|23255071|23255071|23255071 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 23254584 23254634 3'utr EloA FlyBase G33930.1 CAGGTCTGAATAAAGTGACATTGTGATACTAGACCTTCTACTTCCCAGTGC 26 23254604 0.666304242 6 26 170 1 1.62324929 0.095238095 0.384615385 0.619047619 26 0 0 42 3R:23254584-23254634 7 26 2523 FBgn0039066 571.72 24.26333333 37.16333333 0.045476807 1.071575766 0.699614315 1 1 1 0.2 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 23255452 23255457 - 3R_23255452_23255457_- 0.987098361 0.998017037 0.992557699 0.007720616 wda FBtr0084387 23255068 23255493 3R - 23255434 23255480 3'utr wda FlyBase G53644.1 AAGTTCAGCCCGAATTTAGACTTTCTAGTGACGACTTATGTTTGAAA 34 23255464 0.691882377 9 33 263 0.951219512 1.113943352 0.195121951 0.205882353 0.341463415 34 0 2 39 3R:23255434-23255480 6 wda FBtr0084387 23255068 23255493 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R - 23255426 23255479 3'utr wda FlyBase G40547.1 AGTTCAGCCCGAATTTAGACTTTCTAGTGACGACTTATGTTTGAAAATAATTTA 18 23255459 0.965605775 6 17 141 0.954545455 1.021189299 0.045454545 0.222222222 0.363636364 18 0 1 21 3R:23255426-23255479 6 26 2524 FBgn0039067 161 7.11 10.86333333 0.161490683 3.656821378 2.3933722 7 2 4.5 0.2 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3R 23263542 23263548 - 3R_23263542_23263548_- 0.611511149 0.620054389 0.615782769 0.006041025 orb FBtr0334498 23260608 23265852 3R - 23263525 23263562 3'utr orb FlyBase G53650.1 TTATACAGATAAAATGGTGCTTTAGCTGAATTATTAGT 15 23263541 0.652886182 3 15 115 1 1.204119983 0.0625 0.066666667 0.125 15 0 0 16 3R:23263525-23263562 7 orb FBtr0334498 23260608 23265852 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3R - 23263527 23263562 3'utr orb FlyBase G40552.1 TTATACAGATAAAATGGTGCTTTAGCTGAATTATTA 10 23263548 0.778724095 3 9 78 0.941176471 1.204119983 0.176470588 0.5 0.705882353 10 1 0 16 3R:23263527-23263562 7 12.5 2525 FBgn0004882 75.63666667 1.15 1.746666667 0.165263761 10.86956522 7.15648855 -7 0 -3.5 0.2 dme-miR-283-5p 8mer-A1 TGATATTA 3R 23290837 23290844 - 3R_23290837_23290844_- 0.438012009 0.587803072 0.51290754 0.105918303 pnt FBtr0334554|FBtr0089717 23290229|23290229 23291364|23291364 3R - 23290818 23290890 3'utr pnt FlyBase G53659.1 AGGATCGAACGTTGATAGAGGCCATAAAGCATGTGTCCCCCAAAAGTGATATTAGAGCGCAACATTTTGTTAT 51 23290839 0.96504244 9 49 258 0.931034483 1.255272505 0.24137931 0.137254902 0.24137931 51 2 2 54 3R:23290818-23290890 8 pnt FBtr0334554|FBtr0089717 23290229|23290229 23291364|23291364 TGATATTA 8mer-A1 dme-miR-283-5p 3R - 23290825 23290893 3'utr pnt FlyBase G40556.1 GCAAGGATCGAACGTTGATAGAGGCCATAAAGCATGTGTCCCCCAAAAGTGATATTAGAGCGCAACATT 29 23290839 0.913230742 9 26 142 0.894736842 1.531478917 0.184210526 0.24137931 0.421052632 29 4 0 34 3R:23290825-23290893 8 33.5 2526 FBgn0003118 3507.63 110.36 169.3033333 0.009550608 0.303552012 0.197869701 -5 -5 -5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 23605903 23605908 - 3R_23605903_23605908_- 0.989338859 0.991192666 0.990265762 0.001310835 CG31145 FBtr0290056|FBtr0336459 23605749|23605749 23606850|23606850 3R - 23605824 23605930 3'utr CG31145 FlyBase G53713.1 ATTATTGTAACGTTTTTCAATTGTACCTTGAGTGGTTGAGATAGAGATCATTGATTGGCCAAGAAAAGAAAAAGTGACAGGTGAATTGAGTGTGAAAACTATGAGAA 123 23605909 0.824246802 19 117 1115 0.953642384 2.158362492 0.21192053 0.195121951 0.344370861 123 7 0 144 3R:23605824-23605930 6 CG31145 FBtr0336459|FBtr0290056 23605749|23605749 23606850|23606850 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 23605873 23605925 3'utr CG31145 FlyBase G40604.1 TGTAACGTTTTTCAATTGTACCTTGAGTGGTTGAGATAGAGATCATTGATTGG 61 23605909 0.792026983 6 58 586 0.947916667 1.959041392 0.239583333 0.409836066 0.625 61 5 0 91 3R:23605873-23605925 6 81 2527 FBgn0051145 14.00333333 0.44 0.683333333 5.784337063 184.0909091 118.5365854 1 1 1 0.2 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 23606086 23606093 - 3R_23606086_23606093_- 0.621415412 0.62269027 0.622052841 0.00090149 CG31145 FBtr0290056|FBtr0336459 23605749|23605749 23606850|23606850 3R - 23606057 23606154 3'utr CG31145 FlyBase G53715.1 AAGAAAAGTTGTTGCAAGTTTAGTTCGTAAGTTGACCTAACATTATGATCGATATCAGGCGTAGCTTTATCCGATTCAAGGATCGTCTTATTAGTTAG 25 23606109 0.991081207 11 21 218 0.870967742 1.431363764 0.161290323 0.2 0.35483871 25 4 0 27 3R:23606057-23606154 8 CG31145 FBtr0336459|FBtr0290056 23605749|23605749 23606850|23606850 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R - 23606058 23606137 3'utr CG31145 FlyBase G40606.1 GTTTAGTTCGTAAGTTGACCTAACATTATGATCGATATCAGGCGTAGCTTTATCCGATTCAAGGATCGTCTTATTAGTTA 17 23606088 0.88962346 11 16 122 0.875 1.322219295 0.416666667 0.352941176 0.541666667 17 3 0 21 3R:23606058-23606137 8 10 2528 FBgn0051145 14.00333333 0.44 0.683333333 0.714115687 22.72727273 14.63414634 16 -5 5.5 0.2 dme-miR-190-5p 6mer3-8 ACATAT 3R 23606215 23606220 - 3R_23606215_23606220_- 0.997167253 0.945917244 0.971542248 0.036239293 CG31145 FBtr0290056|FBtr0336459 23605749|23605749 23606850|23606850 3R - 23606200 23606240 3'utr CG31145 FlyBase G53716.1 GCATACATTTTATGACTTTTACATATACACTTTTGCATACA 20 23606222 0.722443994 6 18 196 0.888888889 1.380211242 0.037037037 0.25 0.444444444 20 3 0 24 3R:23606200-23606240 6 CG31145 FBtr0336459|FBtr0290056 23605749|23605749 23606850|23606850 ACATAT 6mer3-8 dme-miR-190-5p 3R - 23606206 23606234 3'utr CG31145 FlyBase G40607.1 ATTTTATGACTTTTACATATACACTTTTG 11 23606222 0.757130274 2 11 112 1 1.146128036 0 0.272727273 0.428571429 11 0 0 14 3R:23606206-23606234 6 15.5 2529 FBgn0051145 14.00333333 0.44 0.683333333 1.106879314 35.22727273 22.68292683 2 2 2 0.2 dme-miR-318-3p 8mer-A1 CCCAGTGA 3R 23712878 23712885 - 3R_23712878_23712885_- 0.677215261 0.675781644 0.676498452 0.001013779 nau FBtr0301445|FBtr0084472 23712812|23712812 23712945|23712945 3R - 23712822 23712919 3'utr nau FlyBase G53743.1 TTGTAAAGCTATTTTTAAGAGGATACACGAGATACCCAGTGACCCGAATAGGCCTTAAATTATTTGTATAGCATTAGAACTTAATTAAATGGTAATTC 48 23712880 0.948735073 10 48 213 1 1.73239376 0.37037037 0.083333333 0.185185185 48 0 0 54 3R:23712822-23712919 8 nau FBtr0301445|FBtr0084472 23712812|23712812 23712945|23712945 CCCAGTGA 8mer-A1 dme-miR-318-3p 3R - 23712859 23712903 3'utr nau FlyBase G40621.1 AAGAGGATACACGAGATACCCAGTGACCCGAATAGGCCTTAAATT 30 23712880 0.958694621 3 30 94 1 1.62324929 0.547619048 0.333333333 0.523809524 30 0 0 42 3R:23712859-23712903 8 35 2530 FBgn0002922 0 0 0 Inf Inf Inf -5 -5 -5 0.2 dme-miR-965-3p 7mer-m8 TACGCTT 3R 23751032 23751038 - 3R_23751032_23751038_- 0.577051435 0.487909168 0.532480302 0.063033054 RanBP3 FBtr0084468|FBtr0335003 23750935|23750935 23751241|23751241 3R - 23751016 23751096 3'utr RanBP3 FlyBase G53777.1 TAAATGAAGTGCTGATTTGTAAACCCGTGAGCAGCGTCGACAAAAGACATTTATCCATTACGCTTTGTGTTTATAATTTTT 43 23751039 0.816579694 9 42 443 0.97826087 1.653212514 0.130434783 0.069767442 0.130434783 43 1 0 45 3R:23751016-23751096 7 RanBP3 FBtr0084468|FBtr0335003 23750935|23750935 23751241|23751241 TACGCTT 7mer-m8 dme-miR-965-3p 3R - 23751010 23751053 3'utr RanBP3 FlyBase G40651.1 AAGACATTTATCCATTACGCTTTGTGTTTATAATTTTTTGTTAA 31 23751039 0.806933956 6 30 375 0.975609756 1.602059991 0.048780488 0.258064516 0.43902439 31 1 0 40 3R:23751010-23751053 7 33 2531 FBgn0039110 582.3333333 40.28333333 61.80666667 0.056668575 0.819197352 0.533922986 1 1 1 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 23809228 23809234 - 3R_23809228_23809234_- 0.821739468 0.821772107 0.821755787 2.31E-05 eIF4G2 FBtr0344335 23808283 23810293 3R - 23809202 23809282 5'utr eIF4G2 FlyBase G53863.1 AAAATTCGTAAAGACATGTAAAGTATTTAGCACACAAAGCATGATTATCCAAAGATAAATCTTAAAATTAGCTGTAAAAAG 47 23809238 0.694930987 13 42 273 0.890909091 1.69019608 0.036363636 0.14893617 0.272727273 47 6 0 49 3R:23809202-23809282 7 eIF4G2 FBtr0344335 23808283 23810293 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 23809207 23809270 5'utr eIF4G2 FlyBase G40707.1 GACATGTAAAGTATTTAGCACACAAAGCATGATTATCCAAAGATAAATCTTAAAATTAGCTGTA 23 23809238 0.982911985 8 18 143 0.84375 1.431363764 0.03125 0.304347826 0.5 23 5 0 27 3R:23809207-23809270 7 26 2532 FBgn0260634 1847.216667 30.65 47.06666667 0.01407523 0.848287113 0.552407932 4 4 4 0.2 dme-miR-305-5p 8mer-A1 AGTACAAA 3R 23809542 23809549 - 3R_23809542_23809549_- 0.604452617 0.604498912 0.604475765 3.27E-05 eIF4G2 FBtr0344335 23808283 23810293 3R - 23809465 23809594 5'utr eIF4G2 FlyBase G53865.1 ATACTTTTCTAGACTTTAAACAGAATTTTGTTTATTTTACCTTTCAGTACAAAGCATTATGAACTTCGTTTTGTTTGATTTTTTATAAAGAACTACCAACATTGATTTACCTATTTTCTATGCGAATGGC 83 23809551 0.987385384 12 80 715 0.970588235 1.694605199 0.029411765 0.192771084 0.343137255 83 2 1 99 3R:23809465-23809594 8 eIF4G2 FBtr0344335 23808283 23810293 AGTACAAA 8mer-A1 dme-miR-305-5p 3R - 23809518 23809592 5'utr eIF4G2 FlyBase G40709.1 ACTTTTCTAGACTTTAAACAGAATTTTGTTTATTTTACCTTTCAGTACAAAGCATTATGAACTTCGTTTTGTTTG 44 23809552 0.988108518 8 40 370 0.918032787 1.447158031 0.016393443 0.295454545 0.491803279 44 4 1 56 3R:23809518-23809592 8 57.5 2533 FBgn0260634 1847.216667 30.65 47.06666667 0.031127913 1.876019576 1.221671388 2 3 2.5 0.2 dme-miR-190-5p 6mer3-8 ACATAT 3R 23809684 23809689 - 3R_23809684_23809689_- 0.996553018 0.966877883 0.981715451 0.020983464 eIF4G2 FBtr0344335 23808283 23810293 3R - 23809634 23809802 5'utr eIF4G2 FlyBase G53866.1 GCAAAACTATGTAAAACTGAACCTACGATGCCGAAAAATATTTTGAAGAAATCAAATTCTGACAATGCCTTACCCAATGTGAACTGGGTATAGAAATATATTTATGTATATTTACATATGGACTATTAATTTTTGTAAACTCACAGTATTTCGTTAAACATTAAAATTA 126 23809684 0.919760887 28 119 1100 0.947712418 1.684246748 0.104575163 0.174603175 0.320261438 126 6 2 145 3R:23809634-23809802 6 eIF4G2 FBtr0344335 23808283 23810293 ACATAT 6mer3-8 dme-miR-190-5p 3R - 23809635 23809708 5'utr eIF4G2 FlyBase G40710.1 AATATATTTATGTATATTTACATATGGACTATTAATTTTTGTAAACTCACAGTATTTCGTTAAACATTAAAATT 54 23809684 0.83319595 10 51 541 0.93902439 1.58546073 0.048780488 0.462962963 0.646341463 54 4 1 77 3R:23809635-23809708 6 57.5 2534 FBgn0260634 1847.216667 30.65 47.06666667 0.031127913 1.876019576 1.221671388 -5 -5 -5 0.2 dme-miR-252-5p 6mer3-8 GTACTT 3R 23926479 23926484 - 3R_23926479_23926484_- 0.999973703 0.994964268 0.997468986 0.003542181 CG13601 FBtr0084522|FBtr0330369 23926370|23926370 23926628|23926562 3R - 23926478 23926590 stop_codon CG13601 FlyBase G53920.1 GATGGCAGTGGCGATGGAGGAACAGTAAGGCCGCCCGCTTGTACACATTCAACCTGCAGACCATTTCATCAGTGCTAGTTATGATCAAATCGCGTGTTACCATTTCGTACTTT 16 23926495 0.948123452 10 15 96 0.95 0.977723605 0.2 0.125 0.3 16 0 1 19 3R:23926478-23926590 6 CG13601 FBtr0330369|FBtr0084522 23926370|23926370 23926562|23926628 GTACTT 6mer3-8 dme-miR-252-5p 3R - 23926473 23926533 3'utr CG13601 FlyBase G40741.1 AGACCATTTCATCAGTGCTAGTTATGATCAAATCGCGTGTTACCATTTCGTACTTTAAGTA 12 23926509 0.718262507 7 11 91 0.947368421 1.255272505 0.052631579 0.5 0.684210526 12 1 0 18 3R:23926473-23926533 6 3 2535 FBgn0039126 158.33 17.96666667 27.49333333 0.018947767 0.166975881 0.109117362 11 25 18 0.2 dme-miR-277-3p 7mer-m8 TGCATTT 3R 23936062 23936068 - 3R_23936062_23936068_- 0.574078748 0.492269789 0.533174269 0.057847628 Gdh FBtr0089497|FBtr0335205|FBtr0089498|FBtr0089496 23935956|23935956|23935956|23935956 23936373|23936373|23936373|23936373 3R - 23935999 23936144 3'utr Gdh FlyBase G53934.1 AAGTTGAACAAGTTGCGAGCTTATTATTGTTGATTTTCTGTAATTTTTAAGTTAATGAGCGTCAAAGTGAAGCAATTGCATTTTCAATTATGTATCGCAACGTCTCGTACCGTCAAGTCACGTTTATCGTACGATCGCTCCGTTGC 51 23936069 0.989068525 16 47 447 0.935483871 1.286306739 0.403225806 0.156862745 0.306451613 51 2 2 58 3R:23935999-23936144 7 Gdh FBtr0089498|FBtr0089496|FBtr0089497|FBtr0335205 23935956|23935956|23935956|23935956 23936373|23936373|23936373|23936373 TGCATTT 7mer-m8 dme-miR-277-3p 3R - 23936035 23936091 3'utr Gdh FlyBase G40748.1 AATGAGCGTCAAAGTGAAGCAATTGCATTTTCAATTATGTATCGCAACGTCTCGTAC 14 23936069 0.987019837 3 11 103 0.714285714 0.875061263 0 0.428571429 0.619047619 14 5 1 15 3R:23936035-23936091 7 13 2536 FBgn0001098 137.9033333 7.62 11.54666667 0.094268932 1.706036745 1.125866051 1 1 1 0.2 dme-miR-1007-3p 7mer-A1 GAGCTTA 3R 23936122 23936128 - 3R_23936122_23936128_- 0.793239207 0.823170272 0.80820474 0.021164484 Gdh FBtr0089497|FBtr0335205|FBtr0089498|FBtr0089496 23935956|23935956|23935956|23935956 23936373|23936373|23936373|23936373 3R - 23935999 23936144 3'utr Gdh FlyBase G53934.1 AAGTTGAACAAGTTGCGAGCTTATTATTGTTGATTTTCTGTAATTTTTAAGTTAATGAGCGTCAAAGTGAAGCAATTGCATTTTCAATTATGTATCGCAACGTCTCGTACCGTCAAGTCACGTTTATCGTACGATCGCTCCGTTGC 51 23936118 0.989068525 16 47 447 0.935483871 1.286306739 0.403225806 0.156862745 0.306451613 51 2 2 58 3R:23935999-23936144 7 Gdh FBtr0089498|FBtr0089496|FBtr0089497|FBtr0335205 23935956|23935956|23935956|23935956 23936373|23936373|23936373|23936373 GAGCTTA 7mer-A1 dme-miR-1007-3p 3R - 23936107 23936172 3'utr Gdh FlyBase G40749.1 AAGCGAACTTTCGCCCGTGTTTCGTATTAAGTTGAACAAGTTGCGAGCTTATTATTGTTGATTTTC 17 23936118 0.811802963 5 16 152 0.903225806 1.447158031 0.322580645 0.529411765 0.741935484 17 3 0 28 3R:23936107-23936172 7 17 2537 FBgn0001098 137.9033333 7.62 11.54666667 0.123274758 2.230971129 1.472286374 -10 -10 -10 0.2 dme-miR-999-3p 6mer3-8 AGTTAA 3R 23936329 23936334 - 3R_23936329_23936334_- 0.984734317 0.963850918 0.974292618 0.014766794 Gdh FBtr0089497|FBtr0335205|FBtr0089498|FBtr0089496 23935956|23935956|23935956|23935956 23936373|23936373|23936373|23936373 3R - 23936267 23936449 stop_codon Gdh FlyBase G53936.1 CCTCAGAACCGCTGCCTACGTCAACTCCATTGAGAAGATCTTCACCACATACCGCGATGCCGGCCTGGCCTTCTAAGCCCGCTGAGTGTGCTGATTAGCCCCCAGACTCTTAACTAGTTAATTAAGCAATCGAACTCAAGAGCATAACTATTGCTATTGCTCCATGCACCGCCGTCTTAGATG 63 23936339 0.956534762 19 63 321 1 1.86332286 0.123287671 0.126984127 0.246575342 63 0 0 73 3R:23936267-23936449 6 Gdh FBtr0089498|FBtr0089496|FBtr0089497|FBtr0335205 23935956|23935956|23935956|23935956 23936373|23936373|23936373|23936373 AGTTAA 6mer3-8 dme-miR-999-3p 3R - 23936310 23936410 stop_codon Gdh FlyBase G40751.1 CTTCACCACATACCGCGATGCCGGCCTGGCCTTCTAAGCCCGCTGAGTGTGCTGATTAGCCCCCAGACTCTTAACTAGTTAATTAAGCAATCGAACTCAAG 29 23936356 0.969188146 12 26 144 0.960784314 1.69019608 0.117647059 0.482758621 0.705882353 29 2 0 49 3R:23936310-23936410 6 15.5 2538 FBgn0001098 137.9033333 7.62 11.54666667 0.112397573 2.034120735 1.342378753 5 22 13.5 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3R 23961085 23961091 + 3R_23961085_23961091_+ 0.438012032 0.518939267 0.478475649 0.057224243 AP-1sigma FBtr0305039 23960941 23961504 3R + 23961048 23961166 5'utr AP-1sigma FlyBase G45096.1 TTTACAGCACTGCTCCATCCACTCCTCAACACTAGTGTGTGATTTGGCTGTTGTACAGCACTGAAGCGCTGAAAAAAAAATTATAAGCAAGAAGACGCCAAGCAGCGTGAGGCTCCAAA 23 23961091 0.999506114 8 22 171 0.961538462 1.096910013 0.230769231 0.086956522 0.192307692 23 0 1 25 3R:23961048-23961166 7 AP-1sigma FBtr0305040|FBtr0305039 23960941|23960941 23961118|23961504 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 23961064 23961110 5'utr AP-1sigma FlyBase G34061.1 ATCCACTCCTCAACACTAGTGTGTGATTTGGCTGTTGTACAGCACTG 15 23961091 0.699287916 4 14 144 0.904761905 0.801632346 0.523809524 0.4 0.571428571 15 0 2 19 3R:23961064-23961110 7 14.5 2539 FBgn0039132 832.4666667 93.19333333 142.7733333 0.017418115 0.155590529 0.101559582 -6 -6 -6 0.2 dme-miR-79-3p 7mer-A1 AGCTTTA 3R 23961445 23961451 + 3R_23961445_23961451_+ 0.809083325 0.748847952 0.778965638 0.042592789 AP-1sigma FBtr0305039 23960941 23961504 3R + 23961369 23961464 3'utr AP-1sigma FlyBase G45097.1 AATCAATCACCAAATGGGCAATAACTAATTTAGTGGGGAAATATATGCAATACTATTCTTACAATAGAAACATGTAAGCTTTAATGTTGATTAAAT 23 23961443 0.986945063 6 22 158 0.962962963 1.414973348 0.259259259 0.173913043 0.296296296 23 1 0 26 3R:23961369-23961464 7 AP-1sigma FBtr0305039 23960941 23961504 AGCTTTA 7mer-A1 dme-miR-79-3p 3R + 23961430 23961464 3'utr AP-1sigma FlyBase G34062.2 CAATAGAAACATGTAAGCTTTAATGTTGATTAAAT 20 23961443 0.792994006 5 19 137 0.933333333 1.447158031 0.433333333 0.5 0.666666667 20 2 0 28 3R:23961430-23961464 7 18 2540 FBgn0039132 832.4666667 93.19333333 142.7733333 0.021622487 0.193146863 0.126073963 2 2 2 0.2 dme-miR-283-5p 6mer3-8 TGATAT 3R 23985283 23985288 - 3R_23985283_23985288_- 0.566351637 0.847302945 0.706827291 0.198662569 CG13603 FBtr0084510 23985211 23985472 3R - 23985262 23985402 3'utr CG13603 FlyBase G53976.1 TTGTATGTCATTTCGTCCTCGTCCTTATCATTGAGGCAGACAACCGGCAACACACATTATCTTTGTAGTGAAGGAAACTAGAGATATTAGCCCTATGTATTAAGCCAACATACGTGATATGTAATGTATATATATATATAT 243 23985292 0.9453854 18 232 1175 0.956140351 1.815577748 0.023391813 0.271604938 0.48245614 243 11 4 327 3R:23985262-23985402 6 CG13603 FBtr0084510 23985211 23985472 TGATAT 6mer3-8 dme-miR-283-5p 3R - 23985268 23985321 3'utr CG13603 FlyBase G40779.1 AGATATTAGCCCTATGTATTAAGCCAACATACGTGATATGTAATGTATATATAT 167 23985292 0.889342987 12 161 764 0.960854093 2.431363764 0.039145907 0.431137725 0.661921708 167 11 0 270 3R:23985268-23985321 6 194.5 2541 FBgn0039135 277 32.77 49.89333333 0.702166065 5.935306683 3.898316408 4 4 4 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 23985459 23985464 - 3R_23985459_23985464_- 0.939853185 0.913955513 0.926904349 0.018312439 CG13603 FBtr0084510|FBtr0084510|FBtr0084510 23985211|23985211|23985211 23985472|23985472|23985472 3R - 23985404 23985481 stop_codon CG13603 FlyBase G53977.1 AACAAATAGTTGACGTTTGTGATCAATCAGCAGCAGTTTGTAATTCTCTACGTATTTCTCATCATGTGCGTTATAATC 62 23985465 0.984361879 11 57 454 0.9 1.857332496 0.1375 0.225806452 0.4 62 8 0 72 3R:23985404-23985481 6 CG13603 FBtr0084510|FBtr0084510|FBtr0084510 23985211|23985211|23985211 23985472|23985472|23985472 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 23985354 23985483 stop_codon CG13603 FlyBase G40780.1 AGAACAAATAGTTGACGTTTGTGATCAATCAGCAGCAGTTTGTAATTCTCTACGTATTTCTCATCATGTGCGTTATAATCATTGTATGTCATTTCGTCCTCGTCCTTATCATTGAGGCAGACAACCGGCA 44 23985465 0.98365467 15 42 329 0.941176471 1.204119983 0.044117647 0.477272727 0.661764706 44 1 3 64 3R:23985354-23985483 6 41.5 2542 FBgn0039135 277 32.77 49.89333333 0.149819495 1.266402197 0.831774452 1 1 1 0.2 dme-miR-14-3p 7mer-A1 AGACTGA 3R 23989430 23989436 - 3R_23989430_23989436_- 0.815324897 0.815405825 0.815365361 5.72E-05 CG13604 FBtr0113275|FBtr0113276|FBtr0113277|FBtr0084509 23988804|23988804|23988804|23988804 23989471|23989471|23989471|23989471 3R - 23989408 23989452 3'utr CG13604 FlyBase G53982.1 TTCTCTGCAAGCATTGAGACTGAGACTCAACTCGATTGGGACGGA 26 23989438 0.81861698 2 25 128 0.965517241 1.447158031 0.172413793 0.076923077 0.172413793 26 1 0 28 3R:23989408-23989452 7 CG13604 FBtr0084509|FBtr0113277|FBtr0113276|FBtr0113275 23988804|23988804|23988804|23988804 23989471|23989471|23989471|23989471 AGACTGA 7mer-A1 dme-miR-14-3p 3R - 23989392 23989450 3'utr CG13604 FlyBase G40782.1 CTCTGCAAGCATTGAGACTGAGACTCAACTCGATTGGGACGGACCTGGAGGTGAATCAC 11 23989438 0.959921769 2 11 54 1 1.278753601 0.105263158 0.545454545 0.736842105 11 0 0 19 3R:23989392-23989450 7 17.5 2543 FBgn0039137 117.6666667 5.27 8.02 0.148725212 3.320683112 2.182044888 2 2 2 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3R 23995213 23995219 + 3R_23995213_23995219_+ 0.521223807 0.52122299 0.521223399 5.66E-07 Rab7 FBtr0308612|FBtr0084503|FBtr0308611 23994749|23994749|23994749 23995252|23995452|23995252 3R + 23995150 23995241 3'utr Rab7 FlyBase G45117.1 TGCAACAGAACAGCAACATTGAGAATACAACATCAGAGTATCTTCTAAACAAACAAAAAATCTTGTGATTGTAAATTTAATAAAAGAATAAC 337 23995212 0.988788597 12 310 2912 0.923273657 1.235287907 0.046035806 0.139465875 0.25831202 337 10 20 361 3R:23995150-23995241 7 Rab7 FBtr0308612|FBtr0084503|FBtr0308611 23994749|23994749|23994749 23995252|23995452|23995252 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 23995178 23995245 3'utr Rab7 FlyBase G34078.1 AACATCAGAGTATCTTCTAAACAAACAAAAAATCTTGTGATTGTAAATTTAATAAAAGAATAACTTTT 241 23995219 0.637495373 10 223 2106 0.928571429 1.348026558 0.041666667 0.290456432 0.491071429 241 11 13 312 3R:23995178-23995245 7 281 2544 FBgn0015795 908.47 85 130.1166667 0.30931126 3.305882353 2.159600359 1 -6 -2.5 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3R 23997874 23997880 - 3R_23997874_23997880_- 0.404283367 0.374813769 0.389548568 0.020838154 KrT95D FBtr0084507|FBtr0084508 23997536|23997536 23998637|23998637 3R - 23997866 23997920 3'utr KrT95D FlyBase G53984.1 TCTACCATATATACAAAACCATGTGTACTACTCTTATTGTTGTGATTTTTGAAAT 87 23997897 0.783029589 11 85 756 0.98245614 2.049218023 0.01754386 0.229885057 0.412280702 87 2 0 112 3R:23997866-23997920 7 KrT95D FBtr0084507|FBtr0084508 23997536|23997536 23998637|23998637 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 23997869 23997915 3'utr KrT95D FlyBase G40783.1 CATATATACAAAACCATGTGTACTACTCTTATTGTTGTGATTTTTGA 75 23997897 0.815281468 9 74 623 0.991935484 2.089905111 0 0.466666667 0.677419355 75 1 0 123 3R:23997869-23997915 7 29.5 2545 FBgn0020647 1157.06 25.70333333 39.3 0.025495653 1.147711062 0.750636132 17 17 17 0.2 dme-bantam-3p 8mer-A1 TGATCTCA 3R 23998101 23998108 - 3R_23998101_23998108_- 0.623848571 0.627310557 0.625579564 0.002448004 KrT95D FBtr0084507|FBtr0084508 23997536|23997536 23998637|23998637 3R - 23998055 23998135 3'utr KrT95D FlyBase G53986.1 CCAAGCAATCGGGAGCATTAGGCCCCATGATCTCAAAATCGCCGCTCCCGTTTGGCCAACTATCAAATGAACCTAAAAGTA 92 23998108 0.952704995 10 89 399 0.972477064 1.72427587 0.018348624 0.173913043 0.302752294 92 2 1 106 3R:23998055-23998135 8 KrT95D FBtr0084507|FBtr0084508 23997536|23997536 23998637|23998637 TGATCTCA 8mer-A1 dme-bantam-3p 3R - 23998080 23998133 3'utr KrT95D FlyBase G40785.1 AAGCAATCGGGAGCATTAGGCCCCATGATCTCAAAATCGCCGCTCCCGTTTGGC 63 23998108 0.838644418 5 59 271 0.93814433 1.959041392 0.051546392 0.365079365 0.587628866 63 6 0 91 3R:23998080-23998133 8 73 2546 FBgn0020647 1157.06 25.70333333 39.3 0.063090937 2.84009856 1.857506361 0 0 0 0.2 dme-miR-184-5p 7mer-m8 TGATAAG 3R 24034590 24034596 - 3R_24034590_24034596_- 0.64480414 0.658990626 0.651897383 0.01003137 Miro FBtr0084596|FBtr0084595|FBtr0303849|FBtr0321262 24034360|24034360|24034360|24034360 24034893|24034893|24034893|24034893 3R - 24034590 24034657 3'utr Miro FlyBase G54009.1 GAGCACATTGTGTACGCTGCATTTCTAATCGTATATTAACTTACATAAACCATGTTCTCTCTGATAAG 24 24034605 0.75765264 9 21 172 0.90625 1.462397998 0.125 0.291666667 0.46875 24 3 0 29 3R:24034590-24034657 6 Miro FBtr0084596|FBtr0084595|FBtr0303849|FBtr0321262 24034360|24034360|24034360|24034360 24034893|24034893|24034893|24034893 TGATAAG 7mer-m8 dme-miR-184-5p 3R - 24034556 24034687 3'utr Miro FlyBase G40799.1 GCAGGAATTGGGCTGGAGCAGTGGCCAGTCGAGCACATTGTGTACGCTGCATTTCTAATCGTATATTAACTTACATAAACCATGTTCTCTCTGATAAGTCAAATAAGCTATTGTTACCAGCATATTCGAGTA 14 24034598 0.987621698 9 14 114 1 1.361727836 0.043478261 0.357142857 0.608695652 14 0 0 23 3R:24034556-24034687 7 11.5 2547 FBgn0039140 543 24.22 36.88333333 0.021178637 0.474814203 0.311793945 9 2 5.5 0.2 dme-miR-276a-3p 7mer-m8 AGTTCCT 3R 24042327 24042333 + 3R_24042327_24042333_+ 0.631085557 0.412632804 0.521859181 0.154469456 spas FBtr0084533|FBtr0321260|FBtr0346099 24041623|24041623|24041623 24042654|24042386|24042982 3R + 24042274 24042339 3'utr spas FlyBase G45134.1 GAATCGTATTTAAGTTTTAATAGTTATCACTGTCCGTATGGTTAGTCTAGTTTAGTTCCTTTGTTT 7 24042297 0.995170563 7 7 96 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3R:24042274-24042339 7 spas FBtr0084533|FBtr0321260|FBtr0346099 24041623|24041623|24041623 24042654|24042386|24042982 AGTTCCT 7mer-m8 dme-miR-276a-3p 3R + 24042285 24042330 3'utr spas FlyBase G34091.1 AAGTTTTAATAGTTATCACTGTCCGTATGGTTAGTCTAGTTTAGTT 14 24042310 0.6483564 6 9 129 0.714285714 0.875061263 0.19047619 0.428571429 0.619047619 14 5 1 15 3R:24042285-24042330 4 4.5 2548 FBgn0039141 308.9966667 10.26 15.68 0.014563264 0.438596491 0.286989796 30 17 23.5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 24042416 24042421 + 3R_24042416_24042421_+ 0.961389996 0.985144051 0.973267023 0.016796685 spas FBtr0084533|FBtr0346099 24041623|24041623 24042654|24042982 3R + 24042365 24042445 3'utr spas FlyBase G45135.1 TACAATCGTCTCCGATTCACCTATATTATTAGTAACACACCCAAAAATGTTGTACCTAGCAGGTGCGTATGGATCTGGTGT 54 24042415 0.982767264 7 52 397 0.967213115 1.770852012 0.508196721 0.111111111 0.213114754 54 2 0 59 3R:24042365-24042445 6 spas FBtr0084533|FBtr0346099 24041623|24041623 24042654|24042982 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 24042394 24042442 3'utr spas FlyBase G34092.1 TAGTAACACACCCAAAAATGTTGTACCTAGCAGGTGCGTATGGATCTGG 41 24042415 0.711728743 6 33 257 0.793650794 1.397940009 0.507936508 0.341463415 0.571428571 41 12 1 50 3R:24042394-24042442 6 44 2549 FBgn0039141 308.9966667 10.26 15.68 0.142396358 4.288499025 2.806122449 1 1 1 0.2 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3R 24042549 24042554 + 3R_24042549_24042554_+ 0.696966599 0.751304259 0.724135429 0.038422556 spas FBtr0084533|FBtr0346099 24041623|24041623 24042654|24042982 3R + 24042505 24042570 3'utr spas FlyBase G45137.1 TTGAACCAGCTTCAACGCAGCTCGCCCACCCGGAATTTGAGTTCTTTGACTAGTTACTAAACACAG 11 24042541 0.973387977 6 10 62 0.923076923 1.079181246 0.461538462 0.181818182 0.307692308 11 1 0 12 3R:24042505-24042570 6 spas FBtr0084533|FBtr0346099 24041623|24041623 24042654|24042982 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3R + 24042517 24042554 3'utr spas FlyBase G34093.1 CAACGCAGCTCGCCCACCCGGAATTTGAGTTCTTTGAC 5 24042542 0.977658869 4 4 28 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:24042517-24042554 6 4 2550 FBgn0039141 308.9966667 10.26 15.68 0.012945123 0.389863548 0.255102041 8 7 7.5 0.2 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 24043528 24043533 - 3R_24043528_24043533_- 0.983183623 0.898790762 0.940987192 0.059674721 Rox8 FBtr0333201|FBtr0084594|FBtr0333202|FBtr0333200|FBtr0084592|FBtr0084591 24043054|24043054|24043054|24043054|24043054|24043054 24043963|24043963|24043963|24043963|24043963|24043963 3R - 24043511 24043633 3'utr Rox8 FlyBase G54026.1 AGTCGAACGTTAAGGCGGTGCGTGGAGCTCAACTTCAAGTGATCCACGCCGGCGACAACTGAAAGAACATCAATTGAAAAGCTCCGGGCGATGGGCGGGTAGCTGTAACAATCTAATCCAATC 28 24043542 0.924746377 11 26 94 0.967741935 1.477121255 0.064516129 0.107142857 0.193548387 28 1 0 30 3R:24043511-24043633 6 Rox8 FBtr0333202|FBtr0333200|FBtr0084592|FBtr0084591|FBtr0333201|FBtr0084594 24043054|24043054|24043054|24043054|24043054|24043054 24043963|24043963|24043963|24043963|24043963|24043963 AGCTGT 6mer3-8 dme-miR-1008-3p 3R - 24043500 24043560 3'utr Rox8 FlyBase G40812.1 TTGAAAAGCTCCGGGCGATGGGCGGGTAGCTGTAACAATCTAATCCAATCTAAGTACGTGT 10 24043542 0.941254379 5 9 39 0.823529412 1.146128036 0.117647059 0.5 0.705882353 10 3 0 14 3R:24043500-24043560 6 7.5 2551 FBgn0005649 2598.78 95.18666667 146.0933333 0.00288597 0.078792548 0.051337045 9 9 9 0.2 dme-miR-263a-5p 7mer-m1 TGCCATT 3R 24053535 24053541 + 3R_24053535_24053541_+ 0.761139085 0.763062581 0.762100833 0.00136012 CG5991 FBtr0084538|FBtr0084536|FBtr0084537 24053389|24053389|24053389 24053592|24053592|24053592 3R + 24053391 24053558 3'utr CG5991 FlyBase G45154.1 AAATGGGAGCCACAATTATGTACCGAATCAGTGCAAAGTCCTGTCCCCCAACTGCTCAGATCACTTGTTGTATTAGCATTAGACGCTCGTGTCCTAGGCAAATGTATTTTGTGAACATCCTGCGAAGCTAACTCTGTGTATTGTTGCCATTTCAGTAGTTTTAAGCTA 354 24053531 0.965449348 30 335 2437 0.940047962 1.894316063 0.230215827 0.149717514 0.278177458 354 21 4 392 3R:24053391-24053558 7 CG5991 FBtr0084536|FBtr0084537|FBtr0084538 24053389|24053389|24053389 24053592|24053592|24053592 TGCCATT 7mer-m1 dme-miR-263a-5p 3R + 24053465 24053569 3'utr CG5991 FlyBase G34106.1 AGCATTAGACGCTCGTGTCCTAGGCAAATGTATTTTGTGAACATCCTGCGAAGCTAACTCTGTGTATTGTTGCCATTTCAGTAGTTTTAAGCTATATTTTATACA 174 24053532 0.669943802 16 169 1460 0.971530249 2.436162647 0.434163701 0.408045977 0.633451957 174 8 0 273 3R:24053465-24053569 7 131 2552 FBgn0026576 379.7933333 22.07666667 33.86 0.344924433 5.933866828 3.868871825 4 3 3.5 0.2 dme-bantam-3p 8mer-A1 TGATCTCA 3R 24055167 24055174 - 3R_24055167_24055174_- 0.629644976 0.629436556 0.629540766 0.000147361 Hsp68 FBtr0084589 24055078 24055196 3R - 24055146 24055243 stop_codon Hsp68 FlyBase G54050.1 AGCAAGCTGGCGGTTATAAGGGTCCCACCGTCGAGGAGGTGGACTAATTCAAACGAAGTCCCCCTATATTGATCTCATAACCAAAAATACTCAAATAT 1368 24055175 0.876142772 14 1328 9596 0.971669681 1.952092532 0.177817963 0.159356725 0.306811332 1368 30 17 1612 3R:24055146-24055243 8 Hsp68 FBtr0084589 24055078 24055196 TGATCTCA 8mer-A1 dme-bantam-3p 3R - 24055105 24055193 3'utr Hsp68 FlyBase G40829.1 AAACGAAGTCCCCCTATATTGATCTCATAACCAAAAATACTCAAATATCTAAAAATATAGTTCCAATATGCTATTAAATAGTATTAATA 663 24055175 0.678258466 13 636 4675 0.962151394 1.984977126 0.156374502 0.34841629 0.569721116 663 29 9 966 3R:24055105-24055193 8 1005 2553 FBgn0001230 388.3333333 20.75333333 31.29666667 2.587982833 48.42595567 32.11204601 1 1 1 0.2 dme-miR-11-3p 7mer-m1 TGTGATG 3R 24067400 24067406 - 3R_24067400_24067406_- 0.535593559 0.535593422 0.535593491 1.41E-07 4EHP FBtr0300475|FBtr0303159 24067364|24064475 24101797|24068001 3R - 24067385 24067426 3'utr 4EHP FlyBase G54063.1 TTAATTAGTAATTATTATAATGTGATGTTATATATATAAATC 35 24067410 0.651195498 9 33 393 0.973684211 1.568201724 0.052631579 0.085714286 0.157894737 35 1 0 37 3R:24067385-24067426 7 4EHP FBtr0300475|FBtr0303159 24067364|24064475 24101797|24068001 TGTGATG 7mer-m1 dme-miR-11-3p 3R - 24067384 24067426 3'utr 4EHP FlyBase G40836.1 TTAATTAGTAATTATTATAATGTGATGTTATATATATAAATCA 34 24067399 0.652942345 7 31 396 0.913043478 1.62324929 0 0.294117647 0.47826087 34 4 0 42 3R:24067384-24067426 7 34 2554 FBgn0053100 1050.1 50.24 77.18 0.032377869 0.676751592 0.440528634 4 -7 -1.5 0.2 dme-miR-2535b-3p 8mer-A1 CCGTGAGA 3R 24167711 24167718 - 3R_24167711_24167718_- 0.620187855 0.638867464 0.62952766 0.013208472 CG5510 FBtr0084576 24167673 24167937 3R - 24167692 24167739 3'utr CG5510 FlyBase G54112.1 TGAACTATAGGAAAATTGAGACCGTGAGAATATTATTGCGTAGACAAG 18 24167723 0.760100224 6 17 89 0.958333333 1.361727836 0.125 0.333333333 0.5 18 1 0 23 3R:24167692-24167739 8 CG5510 FBtr0084576 24167673 24167937 CCGTGAGA 8mer-A1 dme-miR-2535b-3p 3R - 24167695 24167734 3'utr CG5510 FlyBase G40868.1 TATAGGAAAATTGAGACCGTGAGAATATTATTGCGTAGAC 6 24167715 0.937340613 3 5 32 0.857142857 0.77815125 0.142857143 0.166666667 0.285714286 6 1 0 6 3R:24167695-24167734 8 11.5 2555 FBgn0039160 449.3066667 40.31666667 61.58 0.025594991 0.285241835 0.186748944 5 -3 1 0.2 dme-miR-317-5p 8mer-A1 GTATCCCA 3R 24167839 24167846 - 3R_24167839_24167846_- 0.672814527 0.667654003 0.670234265 0.003649025 CG5510 FBtr0084576 24167673 24167937 3R - 24167823 24167948 stop_codon CG5510 FlyBase G54113.1 GTTTCTACTGAGCTCTCTAGCTAGTTCATCACAGTAGCATCATGTTAGGAGTTACCCGGACCTCAGTTGATCGCAACTTTTATTTATATTTATACCGCGACTGTATCCCATTTCTTATCACCCTTT 60 24167845 0.936914751 17 56 395 0.940298507 1.498310554 0.119402985 0.116666667 0.208955224 60 3 1 63 3R:24167823-24167948 8 CG5510 FBtr0084576 24167673 24167937 GTATCCCA 8mer-A1 dme-miR-317-5p 3R - 24167808 24167867 3'utr CG5510 FlyBase G40869.1 ATTTATATTTATACCGCGACTGTATCCCATTTCTTATCACCCTTTTTAGTTTCCTTAATT 15 24167845 0.982028415 6 15 118 1 1.380211242 0.041666667 0.4 0.625 15 0 0 24 3R:24167808-24167867 8 20 2556 FBgn0039160 449.3066667 40.31666667 61.58 0.044513027 0.496072757 0.324780773 -1 -1 -1 0.2 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3R 24248459 24248464 + 3R_24248459_24248464_+ 0.704695474 0.928536696 0.816616085 0.15827963 mask FBtr0345261|FBtr0084562|FBtr0334942|FBtr0305043|FBtr0334943|FBtr0084563 24248013|24248013|24248013|24248013|24248013|24248013 24250248|24250248|24250248|24250248|24250248|24248853 3R + 24248448 24248490 3'utr mask FlyBase G45299.1 ATGTTTGAAACTGGTGCCCAGGCAACTGGGTCCAATATATATT 15 24248462 0.860838539 3 14 61 0.9375 1.176091259 0.0625 0.066666667 0.125 15 1 0 15 3R:24248448-24248490 6 mask FBtr0334942|FBtr0305043|FBtr0334943|FBtr0084563|FBtr0345261|FBtr0084562 24248013|24248013|24248013|24248013|24248013|24248013 24250248|24250248|24250248|24248853|24250248|24250248 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3R + 24248446 24248493 3'utr mask FlyBase G34195.1 ACATGTTTGAAACTGGTGCCCAGGCAACTGGGTCCAATATATATTATT 8 24248462 0.971071257 4 7 40 1 1 0 0.428571429 0.6 7 0 0 10 3R:24248446-24248493 6 10.5 2557 FBgn0043884 5250.546667 44.06333333 67.82333333 0.001999792 0.238293366 0.154813977 -3 -3 -3 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 3R 24248551 24248556 + 3R_24248551_24248556_+ 0.554578243 0.796403196 0.67549072 0.170996097 mask FBtr0345261|FBtr0084562|FBtr0334942|FBtr0305043|FBtr0334943|FBtr0084563 24248013|24248013|24248013|24248013|24248013|24248013 24250248|24250248|24250248|24250248|24250248|24248853 3R + 24248500 24248572 3'utr mask FlyBase G45300.1 TAAATGTATTGATATTTTTTGAAGAAGCATGAAGTTAGTGGTAGCTTTTTGTGTGTTGAGCTATAGGGAAAAC 17 24248548 0.989378383 7 16 155 0.952380952 1.301029996 0.333333333 0.117647059 0.285714286 17 1 0 20 3R:24248500-24248572 6 mask FBtr0334942|FBtr0305043|FBtr0334943|FBtr0084563|FBtr0345261|FBtr0084562 24248013|24248013|24248013|24248013|24248013|24248013 24250248|24250248|24250248|24248853|24250248|24250248 TGTGTT 6mer3-8 dme-miR-317-3p 3R + 24248528 24248568 3'utr mask FlyBase G34196.1 ATGAAGTTAGTGGTAGCTTTTTGTGTGTTGAGCTATAGGGA 9 24248549 0.650071115 3 9 93 1 1.146128036 0.571428571 0.444444444 0.642857143 9 0 0 14 3R:24248528-24248568 6 8 2558 FBgn0043884 5250.546667 44.06333333 67.82333333 0.001523651 0.18155685 0.117953507 3 2 2.5 0.2 dme-miR-970-3p 8mer-A1 TCTTATGA 3R 24248707 24248714 + 3R_24248707_24248714_+ 0.630790205 0.630789803 0.630790004 2.83E-07 mask FBtr0345261|FBtr0084562|FBtr0334942|FBtr0305043|FBtr0334943|FBtr0084563 24248013|24248013|24248013|24248013|24248013|24248013 24250248|24250248|24250248|24250248|24250248|24248853 3R + 24248650 24248724 3'utr mask FlyBase G45302.1 ACACAAACCCACACACCCGCATATACACAAATACATTTACGTTAGGATAAAAGTCAGTCTTATGAATGAAACATT 21 24248707 0.972439039 9 20 120 0.916666667 1.342422681 0.125 0.142857143 0.25 21 2 0 22 3R:24248650-24248724 8 mask FBtr0334942|FBtr0305043|FBtr0334943|FBtr0084563|FBtr0345261|FBtr0084562 24248013|24248013|24248013|24248013|24248013|24248013 24250248|24250248|24250248|24248853|24250248|24250248 TCTTATGA 8mer-A1 dme-miR-970-3p 3R + 24248660 24248754 3'utr mask FlyBase G34197.1 ACACACCCGCATATACACAAATACATTTACGTTAGGATAAAAGTCAGTCTTATGAATGAAACATTAAATTGAAATGTTTAGCGCCAGCTAAAGTT 17 24248714 0.981160097 8 15 110 0.913043478 1.322219295 0.043478261 0.235294118 0.434782609 17 2 0 21 3R:24248660-24248754 8 11 2559 FBgn0043884 5250.546667 44.06333333 67.82333333 0.00209502 0.249640669 0.162186072 0 -7 -3.5 0.2 dme-miR-7-5p 6mer3-8 GTCTTC 3R 24291813 24291818 + 3R_24291813_24291818_+ 0.998730526 0.998559007 0.998644767 0.000121269 CG6364 FBtr0084602|FBtr0309095|FBtr0309097|FBtr0309096 24291623|24291623|24291623|24291623 24292251|24292599|24293111|24293371 3R + 24291797 24291894 3'utr CG6364 FlyBase G45335.1 CATCGCTTCTCATTTGGTCTTCTCATCGTAACCGATTAACGTAGTCCTAAGATTGAAAAGTATCTTTAGTATCTACTCTTGCATATGTTCAACAATAC 16 24291811 0.790952198 11 16 141 1 1.230448921 0.176470588 0.0625 0.117647059 16 0 0 17 3R:24291797-24291894 6 CG6364 FBtr0309097|FBtr0309096|FBtr0084602|FBtr0309095 24291623|24291623|24291623|24291623 24293111|24293371|24292251|24292599 GTCTTC 6mer3-8 dme-miR-7-5p 3R + 24291799 24291845 3'utr CG6364 FlyBase G34222.1 TCGCTTCTCATTTGGTCTTCTCATCGTAACCGATTAACGTAGTCCTA 8 24291811 0.704601409 5 8 64 1 1.041392685 0.181818182 0.375 0.545454545 8 0 0 11 3R:24291799-24291845 6 7 2560 FBgn0263398 498.7566667 32.38666667 49.51666667 0.0140349 0.216138329 0.141366543 2 2 2 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3R 24328578 24328584 - 3R_24328578_24328584_- 0.514387328 0.520808641 0.517597985 0.004540545 CG5728 FBtr0084632 24328453 24328688 3R - 24328514 24328593 3'utr CG5728 FlyBase G54186.1 TAAATGAAGTGTGATTCCGAGTGCTACCTTTAAATATATATGTATGATAGTACCTATATATTATAGAAATACATATAAAA 32 24328572 0.986496262 9 28 247 0.930232558 1.301029996 0.279069767 0.28125 0.465116279 32 2 1 40 3R:24328514-24328593 7 CG5728 FBtr0084632 24328453 24328688 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 24328536 24328641 3'utr CG5728 FlyBase G40919.1 AAGAGTTACATACAGTGTTTTTCATGATACTTTATTCTAAAACTATTTTAAATGAAGTGTGATTCCGAGTGCTACCTTTAAATATATATGTATGATAGTACCTATA 22 24328579 0.911690021 15 21 186 0.96969697 1.505149978 0.303030303 0.363636364 0.575757576 22 1 0 32 3R:24328536-24328641 7 19 2561 FBgn0039182 780.49 20.48333333 31.61333333 0.024343682 0.927583401 0.601012231 -12 -5 -8.5 0.2 dme-miR-14-3p 8mer-A1 AAGACTGA 3R 24344645 24344652 - 3R_24344645_24344652_- 0.643543366 0.642809118 0.643176242 0.000519229 CG5746 FBtr0334603 24343893 24346710 3R - 24344606 24344746 3'utr CG5746 FlyBase G54200.1 ATGTATACAATGATTTTATTTGTTATTATTAAGCCGAACCTAAACTACAGTCTTAAAAAGTATAAACAAGATATGCAAATGAAAATTTATTAAAAAGACTGATACTTCACGAGATACAATCTCCATAGATCCAAAGAAACT 58 24344658 0.980591959 18 53 375 0.897058824 1.30820858 0.044117647 0.155172414 0.279411765 58 5 2 61 3R:24344606-24344746 8 CG5746 FBtr0334603 24343893 24346710 AAGACTGA 8mer-A1 dme-miR-14-3p 3R - 24344598 24344745 3'utr CG5746 FlyBase G40927.1 TGTATACAATGATTTTATTTGTTATTATTAAGCCGAACCTAAACTACAGTCTTAAAAAGTATAAACAAGATATGCAAATGAAAATTTATTAAAAAGACTGATACTTCACGAGATACAATCTCCATAGATCCAAAGAAACTAAATATAA 43 24344658 0.988572706 18 36 313 0.84375 1.033423755 0.109375 0.279069767 0.515625 43 6 4 54 3R:24344598-24344745 8 34.5 2562 FBgn0039186 880.5666667 39.34 60.32 0.039179316 0.876970005 0.571949602 6 6 6 0.2 dme-miR-305-5p 8mer-A1 AGTACAAA 3R 24345262 24345269 - 3R_24345262_24345269_- 0.56706338 0.603452875 0.585258127 0.025731262 CG5746 FBtr0334603 24343893 24346710 3R - 24345256 24345328 3'utr CG5746 FlyBase G54203.1 CACGTACCATAACAATTCAATTAGATAAATATCTAAAATTACAAACTGAAAGCACTGAAAGTACAAAATGAAA 31 24345260 0.952942615 6 23 106 0.736842105 0.970036777 0.105263158 0.193548387 0.342105263 31 8 2 28 3R:24345256-24345328 8 CG5746 FBtr0334603 24343893 24346710 AGTACAAA 8mer-A1 dme-miR-305-5p 3R - 24345249 24345308 3'utr CG5746 FlyBase G40930.1 TTAGATAAATATCTAAAATTACAAACTGAAAGCACTGAAAGTACAAAATGAAAATATAAA 27 24345267 0.698878618 7 21 91 0.813953488 0.84509804 0.023255814 0.444444444 0.651162791 27 4 4 35 3R:24345249-24345308 8 24 2563 FBgn0039186 880.5666667 39.34 60.32 0.027255177 0.61006609 0.397877984 -9 -2 -5.5 0.2 dme-miR-14-3p 8mer-A1 AAGACTGA 3R 24345630 24345637 - 3R_24345630_24345637_- 0.641651535 0.638372313 0.640011924 0.002318745 CG5746 FBtr0334603 24343893 24346710 3R - 24345545 24345674 3'utr CG5746 FlyBase G54205.1 AGACGAATAATGAGTGAAAAATGTGAAAAAAAAACGTAAGACTGAATATATTCACGAACCGAAGCTGCACTGCAAGCATACAAGTCAAGAAAAATGAGAGACAAATGAATGAAATAACAGAGTTTTAAGT 42 24345638 0.930267726 12 41 151 0.978723404 1.662757832 0.170212766 0.119047619 0.212765957 42 1 0 46 3R:24345545-24345674 8 CG5746 FBtr0334603 24343893 24346710 AAGACTGA 8mer-A1 dme-miR-14-3p 3R - 24345597 24345648 3'utr CG5746 FlyBase G40932.1 AAAAAAAACGTAAGACTGAATATATTCACGAACCGAAGCTGCACTGCAAGCA 21 24345638 0.919651211 4 18 63 0.870967742 1.431363764 0 0.380952381 0.580645161 21 4 0 27 3R:24345597-24345648 8 20.5 2564 FBgn0039186 880.5666667 39.34 60.32 0.023280463 0.521098119 0.339854111 1 1 1 0.2 dme-bantam-3p 6mer3-8 TGATCT 3R 24346179 24346184 - 3R_24346179_24346184_- 0.998299452 0.999981676 0.999140564 0.001189495 CG5746 FBtr0334603|FBtr0334602|FBtr0273282|FBtr0084631|FBtr0084630|FBtr0334601|FBtr0273283 24343893|24345790|24345790|24345790|24345790|24345790|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 3R - 24346008 24346201 3'utr CG5746 FlyBase G54207.1 AATGAGAGTACGTAACATGATCTTTTGAATGAACTAAATTTAAACATTTTGTGAATCATGTAAAATTGTATACAAATGAATGCAATGTATATTTTAGTTTTTAAGCTGAAAACCGCAATCCACTCTCGACACAATTATTTTCTATCCCACATGCATCTGAAAGCGTTTATGATTTTGCAAGATTGTGTTTTTTT 61 24346184 0.980956857 17 60 438 0.987179487 1.886490725 0.166666667 0.229508197 0.397435897 61 1 0 77 3R:24346008-24346201 6 CG5746 FBtr0273283|FBtr0084630|FBtr0334601|FBtr0273282|FBtr0084631|FBtr0334603|FBtr0334602 24345790|24345790|24345790|24345790|24345790|24343893|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 TGATCT 6mer3-8 dme-bantam-3p 3R - 24346140 24346207 3'utr CG5746 FlyBase G40934.1 CGGAAAAATGAGAGTACGTAACATGATCTTTTGAATGAACTAAATTTAAACATTTTGTGAATCATGTA 40 24346183 0.981501476 5 39 287 0.983050847 1.763427994 0.271186441 0.4 0.593220339 40 1 0 58 3R:24346140-24346207 6 36.5 2565 FBgn0039186 880.5666667 39.34 60.32 0.041450581 0.927808846 0.605106101 0 -1 -0.5 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 3R 24346235 24346241 - 3R_24346235_24346241_- 0.650736104 0.659254889 0.654995496 0.006023701 CG5746 FBtr0334603|FBtr0334602|FBtr0273282|FBtr0084631|FBtr0084630|FBtr0334601|FBtr0273283 24343893|24345790|24345790|24345790|24345790|24345790|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 3R - 24346228 24346333 3'utr CG5746 FlyBase G54208.1 TAGACAAACGGAGCTAGACTGCACTGAGCTCCAGCCTAAGAAAATTAAATGTGCTCCTCCTTAGTTCCATTTACAATTACAAGTCAACTGTGACCAAAGTATGCTA 25 24346264 0.972417503 15 23 144 0.935483871 1.462397998 0.193548387 0.2 0.35483871 25 2 0 29 3R:24346228-24346333 7 CG5746 FBtr0273283|FBtr0084630|FBtr0334601|FBtr0273282|FBtr0084631|FBtr0334603|FBtr0334602 24345790|24345790|24345790|24345790|24345790|24343893|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 24346226 24346289 3'utr CG5746 FlyBase G40935.1 TTAAATGTGCTCCTCCTTAGTTCCATTTACAATTACAAGTCAACTGTGACCAAAGTATGCTACA 15 24346245 0.725993815 10 15 102 1 1.342422681 0.136363636 0.4 0.590909091 15 0 0 22 3R:24346226-24346289 7 7.5 2566 FBgn0039186 880.5666667 39.34 60.32 0.008517243 0.190645653 0.12433687 23 4 13.5 0.2 dme-miR-277-3p 7mer-A1 GCATTTA 3R 24346476 24346482 - 3R_24346476_24346482_- 0.821424613 0.790902105 0.806163359 0.021582667 CG5746 FBtr0334603|FBtr0334602|FBtr0273282|FBtr0084631|FBtr0084630|FBtr0334601|FBtr0273283 24343893|24345790|24345790|24345790|24345790|24345790|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 3R - 24346440 24346576 3'utr CG5746 FlyBase G54210.1 AATTAACTTGCTATACATAACACGCAAACACACACATACGCGGTCACTCAAAGCATACAATTTTAGTTTTAAGTATAAAGTTCTCTTTTTCTTAGCATTTAAGCAAACTAGTGTTTCGACGTCTTTCTACATAAACC 22 24346490 0.991484007 15 20 204 0.931034483 1.431363764 0.068965517 0.272727273 0.448275862 22 2 0 27 3R:24346440-24346576 7 CG5746 FBtr0273283|FBtr0084630|FBtr0334601|FBtr0273282|FBtr0084631|FBtr0334603|FBtr0334602 24345790|24345790|24345790|24345790|24345790|24343893|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 GCATTTA 7mer-A1 dme-miR-277-3p 3R - 24346448 24346506 3'utr CG5746 FlyBase G40938.1 AAGTATAAAGTTCTCTTTTTCTTAGCATTTAAGCAAACTAGTGTTTCGACGTCTTTCTA 6 24346491 0.994884186 5 5 63 0.857142857 0.77815125 0.285714286 0.166666667 0.285714286 6 1 0 6 3R:24346448-24346506 7 4 2567 FBgn0039186 880.5666667 39.34 60.32 0.004542529 0.101677682 0.066312997 8 9 8.5 0.2 dme-miR-7-5p 6mer2-7 TCTTCC 3R 24355848 24355853 + 3R_24355848_24355853_+ 0.999725082 0.999902123 0.999813602 0.000125158 CG6454 FBtr0273323|FBtr0273324|FBtr0330373 24355777|24355777|24355801 24356241|24356241|24356241 3R + 24355821 24355869 3'utr CG6454 FlyBase G45385.1 CGTCCCAAAAGCGTATACTCTCTATTTTCTTCCGCTTAGCTAGAACTAT 7 24355847 0.714462663 5 6 64 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3R:24355821-24355869 6 CG6454 FBtr0330373|FBtr0273323|FBtr0273324 24355801|24355777|24355777 24356241|24356241|24356241 TCTTCC 6mer2-7 dme-miR-7-5p 3R + 24355809 24355893 3'utr CG6454 FlyBase G34254.1 TTTTACGCGAATCGTCCCAAAAGCGTATACTCTCTATTTTCTTCCGCTTAGCTAGAACTATCAGCTCTGCCCAGCAACTGGAGTT 12 24355848 0.950465007 9 11 82 0.933333333 1.146128036 0.066666667 0.25 0.4 12 1 0 14 3R:24355809-24355893 6 4.5 2568 FBgn0039187 605.7933333 16.75333333 25.68 0.007428276 0.268603263 0.175233645 1 0 0.5 0.2 dme-miR-252-5p 6mer3-8 GTACTT 3R 24536417 24536422 - 3R_24536417_24536422_- 0.997995729 0.980233445 0.989114587 0.012559843 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 3R - 24536316 24536446 3'utr CG5789 FlyBase G54228.1 CTATATTCATACAACCGAAATATTGTACTTGAAACTCTAGATAGAAATTTAATAAATAATCGTCGGGTTTATTAAAATATAAATAAGTTTCACACAAATTGGTAATAAAATTGTACATTTAACTTATTGAG 15 24536423 0.978457433 10 14 105 1 1.255272505 0.111111111 0.2 0.333333333 15 0 0 18 3R:24536316-24536446 6 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 GTACTT 6mer3-8 dme-miR-252-5p 3R - 24536315 24536438 3'utr CG5789 FlyBase G40949.1 ATACAACCGAAATATTGTACTTGAAACTCTAGATAGAAATTTAATAAATAATCGTCGGGTTTATTAAAATATAAATAAGTTTCACACAAATTGGTAATAAAATTGTACATTTAACTTATTGAGT 19 24536423 0.981217905 10 19 141 1 1.380211242 0.041666667 0.210526316 0.375 19 0 0 24 3R:24536315-24536438 6 8 2569 FBgn0039207 633.5166667 14.68333333 22.4 0.012627923 0.544835414 0.357142857 1 1 1 0.2 dme-miR-34-5p 6mer2-7 ACTGCC 3R 24536690 24536695 - 3R_24536690_24536695_- 0.799365254 0.992375469 0.895870361 0.136478821 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 3R - 24536647 24536743 3'utr CG5789 FlyBase G54230.1 CATTTCCTTAGTTTAGTTAAGTTTGTTAACGAAAAGTCTAGAATGTGTACTGCCTTATACGTATTGTACTTAGATGTAATCTCCACCAGGGACTACG 76 24536689 0.64873482 15 67 595 0.88 1.643452676 0.08 0.263157895 0.44 76 11 1 88 3R:24536647-24536743 6 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 ACTGCC 6mer2-7 dme-miR-34-5p 3R - 24536640 24536720 3'utr CG5789 FlyBase G40951.1 TGTTAACGAAAAGTCTAGAATGTGTACTGCCTTATACGTATTGTACTTAGATGTAATCTCCACCAGGGACTACGTTGTAAT 67 24536689 0.985773058 10 60 502 0.908045977 1.420505837 0.16091954 0.23880597 0.413793103 67 6 2 79 3R:24536640-24536720 6 54 2570 FBgn0039207 633.5166667 14.68333333 22.4 0.085238484 3.677639047 2.410714286 -6 -6 -6 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 24536787 24536792 - 3R_24536787_24536792_- 0.998244477 0.997096214 0.997670345 0.000811971 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 3R - 24536759 24536843 3'utr CG5789 FlyBase G54231.1 CAACTCTTGGGCTCCCAATGGAAGAGGAATCTTGTCCAAAACAAAAACCGTACCAAAATGATTTTCTTGTGCACATACACATATT 32 24536785 0.864358553 10 31 204 0.974358974 1.579783597 0.025641026 0.1875 0.333333333 32 1 0 38 3R:24536759-24536843 6 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 24536765 24536891 3'utr CG5789 FlyBase G40952.1 CGGAAATCGCATTTAACCAAATCTGGTGCTTATAATGGCTCAAGGTTACAACTCTTGGGCTCCCAATGGAAGAGGAATCTTGTCCAAAACAAAAACCGTACCAAAATGATTTTCTTGTGCACATACA 38 24536784 0.985923419 14 33 271 0.875 1.146128036 0.0625 0.236842105 0.395833333 38 4 2 42 3R:24536765-24536891 6 23 2571 FBgn0039207 633.5166667 14.68333333 22.4 0.03630528 1.566401816 1.026785714 -7 -8 -7.5 0.2 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3R 24536862 24536868 - 3R_24536862_24536868_- 0.620147805 0.367326099 0.493736952 0.178771939 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 3R - 24536846 24536960 stop_codon CG5789 FlyBase G54232.1 CGGGACGAGCGAGATCGCGATCAGGATGAGAGCCAGGAGTGAGAAACGGTGGCCCAAAAAAATATCCATCGGAAATCGCATTTAACCAAATCTGGTGCTTATAATGGCTCAAGGT 18 24536868 0.969171997 8 18 102 1 1.322219295 0.047619048 0.166666667 0.285714286 18 0 0 21 3R:24536846-24536960 7 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3R - 24536765 24536891 3'utr CG5789 FlyBase G40952.1 CGGAAATCGCATTTAACCAAATCTGGTGCTTATAATGGCTCAAGGTTACAACTCTTGGGCTCCCAATGGAAGAGGAATCTTGTCCAAAACAAAAACCGTACCAAAATGATTTTCTTGTGCACATACA 38 24536860 0.985923419 14 33 271 0.875 1.146128036 0.0625 0.236842105 0.395833333 38 4 2 42 3R:24536765-24536891 7 12.5 2572 FBgn0039207 633.5166667 14.68333333 22.4 0.01973113 0.851305335 0.558035714 0 -8 -4 0.2 dme-miR-317-3p 8mer-A1 TGTGTTCA 3R 24558703 24558710 - 3R_24558703_24558710_- 0.62198906 0.616399072 0.619194066 0.003952727 CG13624 FBtr0084672 24557366 24560507 3R - 24558676 24558733 3'utr CG13624 FlyBase G54253.1 CTGCTATTTGTTGCTTAACGTGTTGTGTTCAATTGATATCAAAAGAATTAACTTTCGA 145 24558711 0.751239715 5 143 1366 1 2.292256071 0.433673469 0.289655172 0.474489796 145 0 0 196 3R:24558676-24558733 8 CG13624 FBtr0084672 24557366 24560507 TGTGTTCA 8mer-A1 dme-miR-317-3p 3R - 24558679 24558744 3'utr CG13624 FlyBase G40969.1 AGCCTTTCTTACTGCTATTTGTTGCTTAACGTGTTGTGTTCAATTGATATCAAAAGAATTAACTTT 142 24558711 0.755416847 9 141 1367 0.976303318 2.31386722 0.450236967 0.38028169 0.582938389 142 5 0 206 3R:24558679-24558744 8 141.5 2573 FBgn0039209 1863.993333 50.61333333 77.60666667 0.075912289 2.795706006 1.823296968 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 24558828 24558834 - 3R_24558828_24558834_- 0.762184204 0.761333118 0.761758661 0.000601819 CG13624 FBtr0084672|FBtr0084672|FBtr0084672 24557366|24557366|24557366 24560507|24560507|24560507 3R - 24558772 24558887 3'utr CG13624 FlyBase G54254.1 TTCTAATTTGCATTATCAAAATGAATACTTTTGCTCTGCTTCGATGCTAATTTTGTGATATTTGTATTCAAATTTTCTTTGTTGTGTAGTTCTTTGGGGCGGGATCCTCCTATTTT 179 24558836 0.99371934 18 168 2108 0.944954128 1.614897216 0.26146789 0.184357542 0.330275229 179 8 4 206 3R:24558772-24558887 7 CG13624 FBtr0084672|FBtr0084672|FBtr0084672 24557366|24557366|24557366 24560507|24560507|24560507 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 24558812 24558861 3'utr CG13624 FlyBase G40970.1 ACTTTTGCTCTGCTTCGATGCTAATTTTGTGATATTTGTATTCAAATTTT 126 24558836 0.715429481 11 113 1500 0.914893617 1.33243846 0.271276596 0.412698413 0.606382979 126 9 7 172 3R:24558812-24558861 7 147 2574 FBgn0039209 1863.993333 50.61333333 77.60666667 0.078862943 2.904373024 1.894167168 2 2 2 0.2 dme-miR-965-3p 6mer3-8 TACGCT 3R 24560392 24560397 - 3R_24560392_24560397_- 0.824955003 0.6543787 0.739666851 0.120615658 CG13624 FBtr0084674|FBtr0084673|FBtr0084672|FBtr0345204|FBtr0084675 24559278|24559278|24557366|24559787|24559787 24560507|24560507|24560507|24560507|24560507 3R - 24560382 24560448 5'utr CG13624 FlyBase G54262.1 AAGAACCTGGGCGAATCCACCGAGGAGGTGGACCAACAAATTGCACGCATTTACGCTACCGCCTCTT 8 24560398 0.917592041 6 7 27 1 0.903089987 0.25 0 0 8 0 0 8 3R:24560382-24560448 6 CG13624 FBtr0084673|FBtr0084674|FBtr0084675|FBtr0345204|FBtr0084672 24559278|24559278|24559787|24559787|24557366 24560507|24560507|24560507|24560507|24560507 TACGCT 6mer3-8 dme-miR-965-3p 3R - 24560385 24560434 5'utr CG13624 FlyBase G40976.1 ATCCACCGAGGAGGTGGACCAACAAATTGCACGCATTTACGCTACCGCCT 6 24560398 0.913816239 4 6 21 1 1.041392685 0 0.333333333 0.636363636 6 0 0 11 3R:24560385-24560434 6 3.5 2575 FBgn0039209 1863.993333 50.61333333 77.60666667 0.001877689 0.069151739 0.045099218 1 1 1 0.2 dme-miR-33-5p 7mer-A1 AATGCAA 3R 24623388 24623394 + 3R_24623388_24623394_+ 0.774227575 0.776177927 0.775202751 0.00137907 mld FBtr0304912|FBtr0304915|FBtr0304914|FBtr0304913|FBtr0111012 24623171|24623171|24623171|24623171|24623171 24623899|24623899|24623899|24623899|24623899 3R + 24623365 24623410 3'utr mld FlyBase G45457.1 AAAAGAACCAGCAGACTGCATTGAATGCAATCCCATATTGCACTAA 18 24623385 0.914976998 3 17 56 0.956521739 1.342422681 0.47826087 0.222222222 0.391304348 18 1 0 22 3R:24623365-24623410 7 mld FBtr0111012|FBtr0304914|FBtr0304913|FBtr0304912|FBtr0304915 24623171|24623171|24623171|24623171|24623171 24623899|24623899|24623899|24623899|24623899 AATGCAA 7mer-A1 dme-miR-33-5p 3R + 24623365 24623483 3'utr mld FlyBase G34297.1 AAAAGAACCAGCAGACTGCATTGAATGCAATCCCATATTGCACTAAAAACAAAAGAACACCTAGCGACTAAGCCAAGGATACACTCCCTCAGACACAAATCTTAAGGCTACAAAATATT 39 24623385 0.999256649 9 37 109 0.967213115 1.293730757 0.163934426 0.461538462 0.655737705 39 0 2 59 3R:24623365-24623483 7 15 2576 FBgn0263490 229.3433333 3.983333333 6.11 0.065404125 3.765690377 2.454991817 3 3 3 0.2 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 3R 24636299 24636306 - 3R_24636299_24636306_- 0.623849716 0.625356499 0.624603107 0.001065468 puf FBtr0084668|FBtr0330309|FBtr0330308|FBtr0306172|FBtr0339135 24635268|24635268|24635268|24635268|24635268 24636457|24636403|24636457|24636457|24636457 3R - 24636280 24636320 3'utr puf FlyBase G54298.1 AAGCAACCCAAGGTTGGTGCTAATGGTTGGGTTTGGGTGCG 10 24636307 0.973345582 6 10 67 1 1.146128036 0.071428571 0.4 0.571428571 10 0 0 14 3R:24636280-24636320 8 puf FBtr0339135|FBtr0330308|FBtr0306172|FBtr0084668|FBtr0330309 24635268|24635268|24635268|24635268|24635268 24636457|24636457|24636457|24636457|24636403 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 3R - 24636279 24636320 3'utr puf FlyBase G41008.1 AAGCAACCCAAGGTTGGTGCTAATGGTTGGGTTTGGGTGCGT 8 24636307 0.948334022 3 7 35 1 1 0 0.25 0.4 8 0 0 10 3R:24636279-24636320 8 8.5 2577 FBgn0039214 1184.2 11.81333333 18.17333333 0.007177842 0.719525959 0.467718269 1 1 1 0.2 dme-miR-14-3p 6mer3-8 AAGACT 3R 24653288 24653293 + 3R_24653288_24653293_+ 0.999725384 0.989531343 0.994628364 0.007208317 ash2 FBtr0084659|FBtr0306171|FBtr0084660 24653201|24653201|24653201 24653376|24653376|24653376 3R + 24653261 24653303 3'utr ash2 FlyBase G45491.1 CTATACTTTGGAAAGCAGAAATTTGAAAAGACTATCATCATAC 27 24653283 0.596601202 4 26 150 0.972972973 1.556302501 0.027027027 0.296296296 0.486486486 27 1 0 36 3R:24653261-24653303 6 ash2 FBtr0084659|FBtr0306171|FBtr0084660 24653201|24653201|24653201 24653376|24653376|24653376 AAGACT 6mer3-8 dme-miR-14-3p 3R + 24653256 24653302 3'utr ash2 FlyBase G34324.1 ATGCACTATACTTTGGAAAGCAGAAATTTGAAAAGACTATCATCATA 29 24653295 0.928222065 7 26 149 0.921052632 1.544068044 0.052631579 0.275862069 0.447368421 29 3 0 35 3R:24653256-24653302 6 24.5 2578 FBgn0000139 191.3333333 12.33666667 18.87 0.12804878 1.985949743 1.298357181 5 -7 -1 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 3R 24760277 24760282 + 3R_24760277_24760282_+ 0.57027057 0.585759106 0.578014838 0.010952023 asp FBtr0084692 24760231 24760513 3R + 24760167 24760373 stop_codon asp FlyBase G45533.1 ACGTTTATCTCGTCCGTTTACGCCTTCGATACGATTTTGTGCAAGCTGCAGATCGACATGTTTTAGATTTAGGAAAATTCATCTTTAAATGTTTAATGTTAAAACCATTCTGTGTTGTGTTTTAAAATAGTCACATAAATTCTTAGACCATGCTAGTTTTTTGGAGACAATTAGAAATAGTTTAAGATAATCTAAGACCGTCTTAAC 88 24760275 0.831793272 25 81 906 0.923076923 1.982271233 0.153846154 0.159090909 0.288461538 88 8 0 96 3R:24760167-24760373 6 asp FBtr0084692 24760231 24760513 TGTGTT 6mer3-8 dme-miR-317-3p 3R + 24760248 24760354 3'utr asp FlyBase G34349.1 TCTTTAAATGTTTAATGTTAAAACCATTCTGTGTTGTGTTTTAAAATAGTCACATAAATTCTTAGACCATGCTAGTTTTTTGGAGACAATTAGAAATAGTTTAAGAT 39 24760275 0.877326542 13 37 392 0.964912281 1.740362689 0.192982456 0.333333333 0.543859649 39 2 0 55 3R:24760248-24760354 6 44 2579 FBgn0000140 1001.803333 19.02666667 29.17333333 0.043920796 2.312543798 1.508226691 2 2 2 0.2 dme-miR-1008-3p 6mer2-7 GCTGTG 3R 24769845 24769850 + 3R_24769845_24769850_+ 0.996828507 0.997694224 0.997261366 0.000612142 CG13631 FBtr0084693|FBtr0339253 24769772|24769772 24770111|24770933 3R + 24769815 24769890 3'utr CG13631 FlyBase G45538.1 CGAACGGTCGCAGGAGCGGTCGAGTGCTGTGCTGTGGGTTGTCGGCGGGGGATCTCTGGCTGATCGGAGGAAGGAT 173 24769843 0.767996026 12 168 1129 0.955 1.980003372 0.545 0.12716763 0.245 173 8 1 191 3R:24769815-24769890 6 CG13631 FBtr0339253|FBtr0084693 24769772|24769772 24770933|24770111 GCTGTG 6mer2-7 dme-miR-1008-3p 3R + 24769815 24769915 3'utr CG13631 FlyBase G34353.1 CGAACGGTCGCAGGAGCGGTCGAGTGCTGTGCTGTGGGTTGTCGGCGGGGGATCTCTGGCTGATCGGAGGAAGGATAACACGGAGATATGGATTTGGATAT 206 24769843 0.770927398 13 199 1349 0.968944099 1.892094603 0.562111801 0.412621359 0.624223602 206 7 3 312 3R:24769815-24769915 6 165.5 2580 FBgn0040600 1409.473333 109.07 167.31 0.117419745 1.517374163 0.989181758 2 2 2 0.2 dme-miR-282-5p 7mer-m8 AGAGGCT 3R 24770042 24770048 + 3R_24770042_24770048_+ 0.631143521 0.631468182 0.631305851 0.000229598 CG13631 FBtr0084693|FBtr0339253 24769772|24769772 24770111|24770933 3R + 24769968 24770108 3'utr CG13631 FlyBase G45540.1 GTTCCCAAGATTCCAATGGGTAATCCAAATAGTTCGATTCGTATGACCCGAATGGGTGATCCCCGGATCACGTTAGAGGCTTCAAAGTGTTGGCAGGGGACAGGGCAATCTGTGTAACGACATTCCTTCTCAACAATAACT 147 24770041 0.975419638 16 136 859 0.920903955 1.911157609 0.271186441 0.170068027 0.310734463 147 13 1 163 3R:24769968-24770108 7 CG13631 FBtr0339253|FBtr0084693 24769772|24769772 24770933|24770111 AGAGGCT 7mer-m8 dme-miR-282-5p 3R + 24769998 24770102 3'utr CG13631 FlyBase G34355.1 AGTTCGATTCGTATGACCCGAATGGGTGATCCCCGGATCACGTTAGAGGCTTCAAAGTGTTGGCAGGGGACAGGGCAATCTGTGTAACGACATTCCTTCTCAACA 105 24770041 0.936151021 13 93 551 0.873493976 2.161368002 0.313253012 0.419047619 0.63253012 105 21 0 145 3R:24769998-24770102 7 98.5 2581 FBgn0040600 1409.473333 109.07 167.31 0.069884259 0.903089759 0.588727512 1 1 1 0.2 dme-miR-305-3p 6mer2-7 TGTGCC 3R 24770673 24770678 + 3R_24770673_24770678_+ 0.946116911 0.996912193 0.971514552 0.035917701 CG13631 FBtr0339253 24769772 24770933 3R + 24770600 24770744 3'utr CG13631 FlyBase G45545.2 TTAATATCTATACTACTGTTACTACTCTAATAATCATATTGTATGTGCCGCACGAGGAGAGGGAACTCAAAATTGTGCCCCCAAATGGGTGGTGGATGGTGTTTGCTCAAGTGATTCGTACTAAAATGGCAGCGGGAATGCGATT 57 24770674 0.962280244 20 52 302 0.936507937 1.770852012 0.206349206 0.087719298 0.174603175 57 4 0 59 3R:24770600-24770744 6 CG13631 FBtr0339253 24769772 24770933 TGTGCC 6mer2-7 dme-miR-305-3p 3R + 24770640 24770739 3'utr CG13631 FlyBase G34359.1 GTATGTGCCGCACGAGGAGAGGGAACTCAAAATTGTGCCCCCAAATGGGTGGTGGATGGTGTTTGCTCAAGTGATTCGTACTAAAATGGCAGCGGGAATG 35 24770674 0.9877235 14 32 172 0.928571429 1.716003344 0.321428571 0.371428571 0.607142857 35 4 0 52 3R:24770640-24770739 6 22 2582 FBgn0040600 1409.473333 109.07 167.31 0.015608667 0.201705327 0.131492439 -1 -1 -1 0.2 dme-miR-1006-3p 7mer-A1 GAATTTA 3R 24770792 24770798 + 3R_24770792_24770798_+ 0.768488739 0.807887685 0.788188212 0.0278593 CG13631 FBtr0339253 24769772 24770933 3R + 24770747 24770825 3'utr CG13631 FlyBase G45546.1 TCGCAGAGTGAGAAGTGCTGTAAGTGGCGAATGTTTCGAATGAGAGAATTTAGTTTAGAGAGCGGAGCATCTACAATAT 24 24770796 0.978983812 11 23 159 0.965517241 1.447158031 0.275862069 0.166666667 0.310344828 24 1 0 28 3R:24770747-24770825 7 CG13631 FBtr0339253 24769772 24770933 GAATTTA 7mer-A1 dme-miR-1006-3p 3R + 24770745 24770844 3'utr CG13631 FlyBase G34360.1 AATCGCAGAGTGAGAAGTGCTGTAAGTGGCGAATGTTTCGAATGAGAGAATTTAGTTTAGAGAGCGGAGCATCTACAATATATTTATTATACCTATGAAA 24 24770799 0.978507157 13 22 149 0.967741935 1.176091259 0.129032258 0.260869565 0.451612903 23 0 1 30 3R:24770745-24770844 7 16.5 2583 FBgn0040600 1409.473333 109.07 167.31 0.0117065 0.151278995 0.098619329 -4 -7 -5.5 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 24784792 24784798 - 3R_24784792_24784798_- 0.618441018 0.661499166 0.639970092 0.030446745 CG5805 FBtr0339255|FBtr0084743 24784550|24784735 24785395|24785395 3R - 24784737 24784855 3'utr CG5805 FlyBase G54348.1 GGGTCGCCCCTCCCCAGAGGTCGGGAGGCACTACACTTAGCTAAGCATTCGTGTGTGTGTGTTCTCTGAGTGGATAAACTAGTTTTAGTCTGCATTATAATAAAGTACAAACCAAGAAT 24 24784789 0.98179833 14 22 188 0.935483871 1.462397998 0.258064516 0.291666667 0.451612903 24 2 0 29 3R:24784737-24784855 7 CG5805 FBtr0339255|FBtr0084743 24784550|24784735 24785395|24785395 TGTGTTC 7mer-m8 dme-miR-317-3p 3R - 24784739 24784819 3'utr CG5805 FlyBase G41044.1 TTAGCTAAGCATTCGTGTGTGTGTGTTCTCTGAGTGGATAAACTAGTTTTAGTCTGCATTATAATAAAGTACAAACCAAGA 13 24784799 0.986793487 7 12 99 1 1.204119983 0.5 0.230769231 0.375 13 0 0 16 3R:24784739-24784819 7 9.5 2584 FBgn0039223 334.22 19.37333333 29.52666667 0.028424391 0.490364763 0.321743057 -9 1 -4 0.2 dme-miR-1006-3p 6mer3-8 CGAATT 3R 24784875 24784880 - 3R_24784875_24784880_- 0.999998294 0.862490799 0.931244546 0.097232486 CG5805 FBtr0339255|FBtr0084743 24784550|24784735 24785395|24785395 3R - 24784863 24784927 3'utr CG5805 FlyBase G54348.2 AGCACAGCAATGTTTGCGCCAAACAAAATACCACAAACTGGACATGCCGAATTAGAAATTAATAT 11 24784882 0.98179833 5 10 43 0.933333333 1.146128036 0 0.272727273 0.466666667 11 1 0 14 3R:24784863-24784927 6 CG5805 FBtr0339255|FBtr0084743 24784550|24784735 24785395|24785395 CGAATT 6mer3-8 dme-miR-1006-3p 3R - 24784862 24784901 3'utr CG5805 FlyBase G41045.1 AATACCACAAACTGGACATGCCGAATTAGAAATTAATATC 7 24784876 0.939945793 3 5 25 0.866666667 1.113943352 0 0.714285714 0.866666667 7 2 0 13 3R:24784862-24784901 6 7 2585 FBgn0039223 334.22 19.37333333 29.52666667 0.020944288 0.361321404 0.237073832 2 -4 -1 0.2 dme-miR-79-3p 6mer3-8 TAGCTT 3R 24785106 24785111 - 3R_24785106_24785111_- 0.739274052 0.575839024 0.657556538 0.115566067 CG5805 FBtr0339255|FBtr0084743 24784550|24784735 24785395|24785395 3R - 24785100 24785136 3'utr CG5805 FlyBase G54351.1 AATATGCAAATACCCCAAAGTGTTGTAGCTTAAAGTG 10 24785115 0.678201112 4 9 55 0.923076923 1.079181246 0.076923077 0.3 0.461538462 10 1 0 12 3R:24785100-24785136 6 CG5805 FBtr0339255|FBtr0084743 24784550|24784735 24785395|24785395 TAGCTT 6mer3-8 dme-miR-79-3p 3R - 24785097 24785136 3'utr CG5805 FlyBase G41047.1 AATATGCAAATACCCCAAAGTGTTGTAGCTTAAAGTGTAC 5 24785115 0.801735196 3 5 34 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:24785097-24785136 6 5.5 2586 FBgn0039223 334.22 19.37333333 29.52666667 0.016456226 0.283895389 0.186272296 4 4 4 0.2 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 24805499 24805506 - 3R_24805499_24805506_- 0.374371257 0.379790024 0.377080641 0.0038316 CG5807 FBtr0331697 24805443 24805557 3R - 24805486 24805534 3'utr CG5807 FlyBase G54386.2 AATTTAAGGAAAACTACCTACGATATTGCTGTGATTCAATGACTTAATT 19 24805509 0.981679455 7 18 145 0.958333333 1.361727836 0.083333333 0.157894737 0.333333333 19 1 0 23 3R:24805486-24805534 8 CG5807 FBtr0331697 24805443 24805557 CTGTGATT 8mer-m1 dme-miR-308-3p 3R - 24805451 24805529 3'utr CG5807 FlyBase G41070.1 AAGGAAAACTACCTACGATATTGCTGTGATTCAATGACTTAATTAAAACTTTAAATGATGCTTTAGGGATGCTATAATA 22 24805508 0.771724634 10 22 195 1 1.556302501 0.222222222 0.363636364 0.611111111 22 0 0 36 3R:24805451-24805529 8 15.5 2587 FBgn0027539 323.6833333 14.69666667 22.53666667 0.047886309 1.054660921 0.687768082 3 2 2.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 24805706 24805712 - 3R_24805706_24805712_- 0.751654649 0.751654051 0.75165435 3.54E-07 CG5807 FBtr0084739|FBtr0084739|FBtr0084739 24805665|24805665|24805665 24806410|24806410|24806410 3R - 24805666 24805734 3'utr CG5807 FlyBase G54387.1 ACTAACAAGCGTCTAAAACTTATGTGATAAAAAATAATAATAAACAAAGCATTTTACTAAATTAATCGA 84 24805714 0.976377962 5 80 517 0.95959596 1.977723605 0.090909091 0.130952381 0.262626263 84 4 0 95 3R:24805666-24805734 7 CG5807 FBtr0084739|FBtr0084739|FBtr0084739 24805665|24805665|24805665 24806410|24806410|24806410 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 24805689 24805736 3'utr CG5807 FlyBase G41071.1 ACACTAACAAGCGTCTAAAACTTATGTGATAAAAAATAATAATAAACA 64 24805714 0.803519252 7 61 386 0.966666667 1.939519253 0.133333333 0.359375 0.544444444 64 3 0 87 3R:24805689-24805736 7 73 2588 FBgn0027539 323.6833333 14.69666667 22.53666667 0.225529066 4.967112724 3.239165804 2 2 2 0.2 dme-miR-2a-2-5p 7mer-m1 GATGAGG 3R 24805795 24805801 - 3R_24805795_24805801_- 0.742470175 0.78864482 0.765557497 0.032650373 CG5807 FBtr0084739 24805665 24806410 3R - 24805774 24805836 3'utr CG5807 FlyBase G54388.1 ATAAGATTTTAACAATGTTCCTTAAGCAGCGAAACGATGAGGCGTGTTCATTTCATTTTACGG 110 24805821 0.977067508 9 107 648 0.9609375 1.788875116 0.0625 0.154545455 0.2734375 110 4 1 123 3R:24805774-24805836 7 CG5807 FBtr0084739 24805665 24806410 GATGAGG 7mer-m1 dme-miR-2a-2-5p 3R - 24805785 24805834 3'utr CG5807 FlyBase G41072.1 AAGATTTTAACAATGTTCCTTAAGCAGCGAAACGATGAGGCGTGTTCATT 70 24805821 0.983464342 4 68 395 0.982608696 1.752048448 0.113043478 0.471428571 0.67826087 70 1 1 113 3R:24805785-24805834 7 38 2589 FBgn0027539 323.6833333 14.69666667 22.53666667 0.117398692 2.585620322 1.686141103 20 20 20 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 24806206 24806212 - 3R_24806206_24806212_- 0.654138743 0.658090909 0.656114826 0.002794627 CG5807 FBtr0084739 24805665 24806410 3R - 24806106 24806315 3'utr CG5807 FlyBase G54391.2 TACCAAGTATCGTAACCTTAGTCGTAAGAGCAGTCGCAATACCACCGCTAGTCGCAAGGCAAACGAAATGAACTGTTAAGACACGAGAAAAACATGGGAGATGGGCAGCTGAAACTATATAATATACCTTTACATATGTTATATGATCACGTATAGTTGTGCAGAACTGATACTAATATTTAAATTTTGCAATGTTAACTGTTGTGCTTA 83 24806214 0.912604631 24 76 433 0.91 1.481920138 0.16 0.180722892 0.32 83 7 2 91 3R:24806106-24806315 7 CG5807 FBtr0084739 24805665 24806410 GGCAGCT 7mer-m8 dme-miR-980-3p 3R - 24806189 24806287 3'utr CG5807 FlyBase G41075.1 AGCAGTCGCAATACCACCGCTAGTCGCAAGGCAAACGAAATGAACTGTTAAGACACGAGAAAAACATGGGAGATGGGCAGCTGAAACTATATAATATAC 23 24806214 0.824993052 7 21 65 0.911764706 1.491361694 0.147058824 0.391304348 0.588235294 23 3 0 31 3R:24806189-24806287 7 20.5 2590 FBgn0027539 323.6833333 14.69666667 22.53666667 0.063333505 1.394874121 0.909628753 2 2 2 0.2 dme-bantam-3p 6mer3-8 TGATCT 3R 24854437 24854442 + 3R_24854437_24854442_+ 0.97409616 0.98295152 0.97852384 0.006261643 nct FBtr0301865|FBtr0306087|FBtr0334570|FBtr0084705 24854236|24854089|24854385|24854236 24854869|24854569|24854869|24854569 3R + 24854393 24854498 3'utr nct FlyBase G45585.1 AAAGAATATCTGATCACGTGCCGAAGATGATTGGTTGCTGAATATGATCTAAAACAAAAAACAGACTTAACAAAGACACTAAAATGATATTCTAACTCGTCTTATT 108 24854437 0.979653696 13 104 720 0.96031746 2.08278537 0.03968254 0.148148148 0.26984127 108 5 0 121 3R:24854393-24854498 6 nct FBtr0334570|FBtr0301865|FBtr0306087 24854385|24854236|24854089 24854869|24854869|24854569 TGATCT 6mer3-8 dme-bantam-3p 3R + 24854408 24854502 3'utr nct FlyBase G34380.2 ACGTGCCGAAGATGATTGGTTGCTGAATATGATCTAAAACAAAAAACAGACTTAACAAAGACACTAAAATGATATTCTAACTCGTCTTATTTAAA 81 24854437 0.747772255 16 76 525 0.915254237 1.556302501 0.033898305 0.345679012 0.550847458 81 8 2 108 3R:24854408-24854502 6 77 2591 FBgn0039234 994.94 43.80666667 67.10333333 0.077391602 1.75772333 1.14748398 0 0 0 0.2 dme-bantam-3p 6mer3-8 TGATCT 3R 24854785 24854790 + 3R_24854785_24854790_+ 0.613761558 0.539728446 0.576745002 0.052349378 nct FBtr0301865|FBtr0334570 24854236|24854385 24854869|24854869 3R + 24854647 24854808 3'utr nct FlyBase G45587.1 TAGGATTAACCAACCCAATTGAACCTCTGATAATGCCAAGGAAGAGATGTCTGTACAAATATTGACAAGAAACTGCTATAACTTATAAATCACTGGAAATATTTATACCTTCTGCATCTATTGCGATACTGAACTTAATGATCTGAAATCATTACTTCATAG 112 24854785 0.831493117 26 107 741 0.956834532 1.822821645 0.079136691 0.214285714 0.366906475 112 5 1 133 3R:24854647-24854808 6 nct FBtr0334570|FBtr0301865 24854385|24854236 24854869|24854869 TGATCT 6mer3-8 dme-bantam-3p 3R + 24854755 24854840 3'utr nct FlyBase G34382.1 CTTCTGCATCTATTGCGATACTGAACTTAATGATCTGAAATCATTACTTCATAGAAGACAAATAATTATTATAACGACTTTAAATT 50 24854785 0.976912572 7 49 329 0.973333333 1.86332286 0.053333333 0.4 0.6 50 2 0 73 3R:24854755-24854840 6 51.5 2592 FBgn0039234 994.94 43.80666667 67.10333333 0.051761915 1.175620149 0.767473052 0 0 0 0.2 dme-miR-965-3p 7mer-m8 TACGCTT 3R 24868756 24868762 - 3R_24868756_24868762_- 0.578319486 0.613783343 0.596051414 0.025076693 CycB3 FBtr0334578 24867932 24868800 3R - 24868585 24868800 3'utr CycB3 FlyBase G54409.1 GACAGCCTCAAAGTTTAGCCAAATTCAACATGATACGATACGCTTCACTTAGGCTCTAAGACGCTTCTATTCCCAATATTAGCCCCATCCCGACGAAACAGCGGATCCCCGCCTTAATCTAAAAACCCCTGATTTTACCCCTTACCTAGTGTTCCCGTCAAGTCCTCGCAATTTATTATATTTTAATTATTATTGTGACCTTCGCATTATTGACAT 260 24868762 0.999926671 28 239 1955 0.919732441 1.594234654 0.163879599 0.130769231 0.244147157 260 18 6 275 3R:24868585-24868800 7 CycB3 FBtr0084728|FBtr0334578 24868354|24867932 24868800|24868800 TACGCTT 7mer-m8 dme-miR-965-3p 3R - 24868631 24868801 stop_codon CycB3 FlyBase G41090.1 GGACAGCCTCAAAGTTTAGCCAAATTCAACATGATACGATACGCTTCACTTAGGCTCTAAGACGCTTCTATTCCCAATATTAGCCCCATCCCGACGAAACAGCGGATCCCCGCCTTAATCTAAAAACCCCTGATTTTACCCCTTACCTAGTGTTCCCGTCAAGTCCTCGCA 106 24868762 0.983092285 20 95 716 0.90797546 1.471291711 0.233128834 0.358490566 0.582822086 106 11 4 148 3R:24868631-24868801 7 122 2593 FBgn0015625 158.3333333 6.95 10.59666667 0.770526316 17.55395683 11.51305442 0 0 0 0.2 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3R 24922285 24922290 + 3R_24922285_24922290_+ 0.760234198 0.951920397 0.856077298 0.135542612 CG11168 FBtr0306089|FBtr0084715|FBtr0337009|FBtr0337010 24920050|24922185|24922185|24922185 24922385|24922385|24922385|24922385 3R + 24922272 24922352 3'utr CG11168 FlyBase G45600.1 TTTTACTCATTTGCTAGTCGTTGATGCCATCTCGATGCTGGCTTTGCTCCACATAAGGCAGCTCACATGTTAAGTATTTTG 31 24922283 0.773283678 12 30 262 0.973684211 1.568201724 0.157894737 0.193548387 0.342105263 31 1 0 37 3R:24922272-24922352 6 CG11168 FBtr0337010|FBtr0337009|FBtr0084715|FBtr0306089 24922185|24922185|24922185|24920050 24922385|24922385|24922385|24922385 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3R + 24922269 24922337 3'utr CG11168 FlyBase G34389.1 TTTTTTTACTCATTTGCTAGTCGTTGATGCCATCTCGATGCTGGCTTTGCTCCACATAAGGCAGCTCAC 28 24922282 0.946826023 9 27 216 0.888888889 1.602059991 0.311111111 0.392857143 0.622222222 28 5 0 40 3R:24922269-24922337 6 23.5 2594 FBgn0039249 138.3333333 5.443333333 8.356666667 0.169879518 4.317207593 2.812126047 2 3 2.5 0.2 dme-bantam-3p 6mer3-8 TGATCT 3R 24935214 24935219 - 3R_24935214_24935219_- 0.994741216 0.974321176 0.984531196 0.01443912 Osbp FBtr0084801 24934867 24935398 3R - 24935195 24935240 3'utr Osbp FlyBase G54445.1 GCATATTGTAGTACCACACTTTGATCTAGAGCATATTTATATATAT 43 24935220 0.715473304 6 42 296 0.962264151 1.707570176 0.132075472 0.209302326 0.358490566 43 2 0 51 3R:24935195-24935240 6 Osbp FBtr0084801 24934867 24935398 TGATCT 6mer3-8 dme-bantam-3p 3R - 24935194 24935279 3'utr Osbp FlyBase G41117.1 AGCGGGACACGCTCCGACTGATTTCGGAGCAGCACATACGCATATTGTAGTACCACACTTTGATCTAGAGCATATTTATATATATA 36 24935220 0.846820347 7 35 210 0.964912281 1.740362689 0.105263158 0.444444444 0.649122807 36 2 0 55 3R:24935194-24935279 6 32 2595 FBgn0020626 533.3433333 19.94666667 30.62 0.059998875 1.604278075 1.045068583 1 1 1 0.2 dme-miR-252-5p 6mer3-8 GTACTT 3R 24939081 24939086 - 3R_24939081_24939086_- 0.999949635 0.993249168 0.996599402 0.004737898 ssh FBtr0084799|FBtr0301612|FBtr0084800|FBtr0301613 24938708|24939001|24939001|24939001 24939428|24939804|24939428|24939804 3R - 24939010 24939126 3'utr ssh FlyBase G54460.1 GAGGGCAAACAAAACAACCTATGGAAATGAAACTGTATTTGTACTTTTAAATTACTTGTAACTGTATACATATTTATTTTATATTATGCAAGAACTGCCTACGAATAAACGATTTAT 48 24939105 0.982895212 16 45 339 0.925925926 1.698970004 0.074074074 0.125 0.222222222 48 4 0 50 3R:24939010-24939126 6 ssh FBtr0084800|FBtr0301613|FBtr0084799|FBtr0301612 24939001|24939001|24938708|24939001 24939428|24939804|24939428|24939804 GTACTT 6mer3-8 dme-miR-252-5p 3R - 24939006 24939128 3'utr ssh FlyBase G41125.1 GAGAGGGCAAACAAAACAACCTATGGAAATGAAACTGTATTTGTACTTTTAAATTACTTGTAACTGTATACATATTTATTTTATATTATGCAAGAACTGCCTACGAATAAACGATTTATTGTA 30 24939105 0.97558687 11 28 187 0.926829268 1.278753601 0.219512195 0.366666667 0.536585366 30 2 1 38 3R:24939006-24939128 6 11.5 2596 FBgn0029157 492.83 13.26666667 20.39666667 0.023334618 0.866834171 0.563817617 19 19 19 0.2 dme-miR-1012-3p 6mer2-7 TGACTA 3R 25029661 25029666 - 3R_25029661_25029666_- 0.95472371 0.998567525 0.976645617 0.031002248 Smg6 FBtr0084796 25029427 25029778 3R - 25029617 25029708 3'utr Smg6 FlyBase G54482.1 GGAGCGAGCTCGAGCTATTATATTACCTACATTATACATAAATGACTATGTAAGACGGGGTCGGCAGATGCGGACACATACGCTGGCTGCGG 11 25029686 0.968148557 6 10 58 0.846153846 1.041392685 0.461538462 0.181818182 0.307692308 11 2 0 11 3R:25029617-25029708 6 Smg6 FBtr0084796 25029427 25029778 TGACTA 6mer2-7 dme-miR-1012-3p 3R - 25029617 25029696 3'utr Smg6 FlyBase G41140.1 AGCTATTATATTACCTACATTATACATAAATGACTATGTAAGACGGGGTCGGCAGATGCGGACACATACGCTGGCTGCGG 7 25029677 0.988423747 6 6 41 0.9 0.954242509 0.1 0.428571429 0.6 7 1 0 9 3R:25029617-25029696 6 3.5 2597 FBgn0039260 358.6633333 12.99666667 19.73666667 0.009758455 0.26929982 0.17733491 20 11 15.5 0.2 dme-miR-14-3p 8mer-A1 AAGACTGA 3R 25033955 25033962 - 3R_25033955_25033962_- 0.480433525 0.542497077 0.511465301 0.043885592 CG6422 FBtr0084794 25033874 25034581 3R - 25033944 25033985 3'utr CG6422 FlyBase G54490.1 ATCCAATAATTATACGTTAGTGGAAGACTGAAACAGTATAAT 9 25033966 0.957546438 2 8 46 0.75 0.954242509 0 0.222222222 0.416666667 9 3 0 9 3R:25033944-25033985 8 CG6422 FBtr0084794 25033874 25034581 AAGACTGA 8mer-A1 dme-miR-14-3p 3R - 25033944 25033979 3'utr CG6422 FlyBase G41144.1 TAATTATACGTTAGTGGAAGACTGAAACAGTATAAT 8 25033967 0.933473657 3 7 35 1 1 0.1 0.125 0.3 8 0 0 10 3R:25033944-25033979 8 8 2598 FBgn0039261 1441.73 59.75 92.00666667 0.005548889 0.133891213 0.086950221 4 5 4.5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG 3R 25040529 25040535 - 3R_25040529_25040535_- 0.692566382 0.693073878 0.69282013 0.000358857 5PtaseI FBtr0299660|FBtr0299662 25040425|25040425 25040818|25040600 3R - 25040513 25040542 3'utr 5PtaseI FlyBase G54506.1 GTGTTATGTACCTGTTATGTTAAACGCGTC 18 25040536 0.736106242 4 17 181 0.947368421 1.255272505 0.842105263 0.055555556 0.105263158 18 1 0 18 3R:25040513-25040542 7 5PtaseI FBtr0299662|FBtr0299660 25040425|25040425 25040600|25040818 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 25040511 25040543 3'utr 5PtaseI FlyBase G41157.1 TGTGTTATGTACCTGTTATGTTAAACGCGTCCA 11 25040536 0.870601188 4 11 109 1 1.278753601 0.526315789 0.454545455 0.684210526 11 0 0 19 3R:25040511-25040543 7 14.5 2599 FBgn0259178 182.6666667 9.633333333 14.71333333 0.079379562 1.505190311 0.98550068 1 1 1 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 25041103 25041109 - 3R_25041103_25041109_- 0.66120817 0.661110723 0.661159446 6.89E-05 5PtaseI FBtr0299661 25041064 25041727 3R - 25041089 25041156 3'utr 5PtaseI FlyBase G54507.1 AAACTATTTCTTTGAATCTGTGTTTTAAGTATGTACATTGTTTATTATGTGTTCGTCTTCTTTAAGAA 25 25041109 0.707009066 10 22 307 0.833333333 1.397940009 0.366666667 0.16 0.3 25 5 0 25 3R:25041089-25041156 7 5PtaseI FBtr0299661 25041064 25041727 TGTGTTC 7mer-m8 dme-miR-317-3p 3R - 25041088 25041122 3'utr 5PtaseI FlyBase G41158.1 ACATTGTTTATTATGTGTTCGTCTTCTTTAAGAAA 18 25041111 0.683460874 8 14 224 0.826086957 0.801632346 0.260869565 0.166666667 0.347826087 18 2 2 19 3R:25041088-25041122 7 17 2600 FBgn0259178 182.6666667 9.633333333 14.71333333 0.093065693 1.764705882 1.15541459 0 2 1 0.2 dme-miR-276a-3p 6mer2-7 GTTCCT 3R 25041193 25041198 - 3R_25041193_25041198_- 0.934829151 0.566843929 0.75083654 0.260204901 5PtaseI FBtr0299661 25041064 25041727 3R - 25041171 25041288 3'utr 5PtaseI FlyBase G54508.1 TAAATATGTCGAGCGATTGTAGTTATAATCTTAAACTCATGTGCATTTAAAAGCCATACCGAAATCTCTTATATCCATCTTATGTACCCTGTTCCTTTTCGCAGTGAAAGCGATTCAG 72 25041192 0.936389645 15 71 582 0.988636364 1.939519253 0.079545455 0.180555556 0.329545455 72 1 0 87 3R:25041171-25041288 6 5PtaseI FBtr0299661 25041064 25041727 GTTCCT 6mer2-7 dme-miR-276a-3p 3R - 25041165 25041239 3'utr 5PtaseI FlyBase G41160.1 AAAGCCATACCGAAATCTCTTATATCCATCTTATGTACCCTGTTCCTTTTCGCAGTGAAAGCGATTCAGCCTAAG 32 25041192 0.719074125 8 31 258 1 1.716003344 0.038461538 0.46875 0.673076923 32 0 0 52 3R:25041165-25041239 6 27.5 2601 FBgn0259178 182.6666667 9.633333333 14.71333333 0.150547445 2.85467128 1.869053013 -6 -6 -6 0.2 dme-miR-277-3p 7mer-m8 TGCATTT 3R 25099527 25099533 + 3R_25099527_25099533_+ 0.32968485 0.31125374 0.320469295 0.013032756 CG33096 FBtr0301976|FBtr0301975|FBtr0114464 25099278|25099278|25099278 25099785|25099785|25099785 3R + 25099496 25099546 3'utr CG33096 FlyBase G45704.1 TTTATTCAGCCGCATCAATACATTCGAGAATTGCATTTTTTAAAAGATTAT 6 25099526 0.987448321 2 5 48 1 0.77815125 0.166666667 0 0 6 0 0 6 3R:25099496-25099546 7 CG33096 FBtr0301976|FBtr0114464|FBtr0301975 25099278|25099278|25099278 25099785|25099785|25099785 TGCATTT 7mer-m8 dme-miR-277-3p 3R + 25099491 25099541 3'utr CG33096 FlyBase G34463.1 AATTATTTATTCAGCCGCATCAATACATTCGAGAATTGCATTTTTTAAAAG 8 25099526 0.897773284 3 6 57 0.785714286 1.041392685 0.357142857 0.375 0.642857143 8 3 0 11 3R:25099491-25099541 7 5.5 2602 FBgn0053096 531.5033333 20.77333333 31.74 0.010348007 0.264762516 0.173282924 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 25099598 25099603 + 3R_25099598_25099603_+ 0.999999016 0.999162131 0.999580574 0.000591778 CG33096 FBtr0301976|FBtr0301976|FBtr0301976|FBtr0301975|FBtr0301975|FBtr0301975|FBtr0114464|FBtr0114464|FBtr0114464 25099278|25099278|25099278|25099278|25099278|25099278|25099278|25099278|25099278 25099785|25099785|25099785|25099785|25099785|25099785|25099785|25099785|25099785 3R + 25099584 25099626 3'utr CG33096 FlyBase G45705.1 CATTCTTACAGCATTGTGATCCTGGTCCCCGTATTAATTGAAT 22 25099597 0.632671549 7 22 168 1 1.414973348 0.269230769 0.181818182 0.307692308 22 0 0 26 3R:25099584-25099626 6 CG33096 FBtr0301976|FBtr0301976|FBtr0301976|FBtr0114464|FBtr0114464|FBtr0114464|FBtr0301975|FBtr0301975|FBtr0301975 25099278|25099278|25099278|25099278|25099278|25099278|25099278|25099278|25099278 25099785|25099785|25099785|25099785|25099785|25099785|25099785|25099785|25099785 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 25099578 25099631 3'utr CG33096 FlyBase G34464.1 GATCCCCATTCTTACAGCATTGTGATCCTGGTCCCCGTATTAATTGAATAAGCA 21 25099597 0.71950174 5 19 162 0.90625 1.161368002 0.5 0.380952381 0.59375 21 2 1 29 3R:25099578-25099631 6 21 2603 FBgn0053096 531.5033333 20.77333333 31.74 0.039510571 1.010911425 0.661625709 1 1 1 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 25101960 25101967 + 3R_25101960_25101967_+ 0.624837318 0.625007919 0.624922619 0.000120632 CG33095 FBtr0100204|FBtr0084774 25101745|25101745 25102146|25102146 3R + 25101921 25101979 3'utr CG33095 FlyBase G45710.1 TTTAGTAGTACCTTAAGTTTGAAATTTTTACAGTGATTTTGCATTTATATTAAGTAACA 34 25101959 0.991963354 7 34 383 1 1.633468456 0.046511628 0.264705882 0.418604651 34 0 0 43 3R:25101921-25101979 8 CG33095 FBtr0084774|FBtr0100204 25101745|25101745 25102146|25102146 TGCATTTA 8mer-A1 dme-miR-277-3p 3R + 25101935 25101978 3'utr CG33095 FlyBase G34468.1 AAGTTTGAAATTTTTACAGTGATTTTGCATTTATATTAAGTAAC 29 25101959 0.716080602 6 28 311 0.97826087 1.653212514 0.043478261 0.310344828 0.565217391 29 1 0 45 3R:25101935-25101978 8 31 2604 FBgn0053095 476.96 16.58 25.46 0.064994968 1.869722557 1.217596229 1 1 1 0.2 dme-miR-11-3p 7mer-m1 TGTGATG 3R 25233928 25233934 - 3R_25233928_25233934_- 0.577336694 0.579082196 0.578209445 0.001234255 CG10420 FBtr0084870 25233634 25234044 3R - 25233811 25233994 3'utr CG10420 FlyBase G54597.1 TGAGTTGGAATGAAATTCGCAGCCAAACCATAGAATACGATAGCTAAGATGCCAAGTACTTGTGATGCAAAAATAATGCTCTTTGTCATTAACTTAGGATAGCAATCAATCATGCCAAACATCTACAGGATTTTCGTTATCAAATATAGTCTCTTACTTAAGATTATTTTAAGTGTGATTTTTT 198 25233935 0.876666322 33 186 1262 0.918803419 1.429348473 0.179487179 0.136363636 0.269230769 198 12 7 215 3R:25233811-25233994 7 CG10420 FBtr0084870 25233634 25234044 TGTGATG 7mer-m1 dme-miR-11-3p 3R - 25233820 25233996 3'utr CG10420 FlyBase G41214.1 GCTGAGTTGGAATGAAATTCGCAGCCAAACCATAGAATACGATAGCTAAGATGCCAAGTACTTGTGATGCAAAAATAATGCTCTTTGTCATTAACTTAGGATAGCAATCAATCATGCCAAACATCTACAGGATTTTCGTTATCAAATATAGTCTCTTACTTAAGATTATTTTAAGTG 124 25233935 0.93320124 19 113 751 0.944723618 1.496006599 0.190954774 0.427419355 0.64321608 124 6 5 188 3R:25233820-25233996 7 116.5 2605 FBgn0039296 113.6666667 7.593333333 11.63333333 1.024926686 15.34240562 10.01432665 1 1 1 0.2 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 25260357 25260362 + 3R_25260357_25260362_+ 0.999962834 0.992791802 0.996377318 0.005070663 CG11857 FBtr0084814 25260035 25260759 3R + 25260330 25260401 3'utr CG11857 FlyBase G45796.1 CACTGTTGAGTTGTCGTACGGCGTCTTGTGCAAAATACCTTGTTTATTGTTTAATCTAACTGCTTGTTTAAA 30 25260356 0.899577833 12 29 245 1 1.556302501 0.055555556 0.133333333 0.277777778 30 0 0 36 3R:25260330-25260401 6 CG11857 FBtr0084814 25260035 25260759 GTGCAA 6mer3-8 dme-miR-92b-3p 3R + 25260329 25260403 3'utr CG11857 FlyBase G34546.1 TCACTGTTGAGTTGTCGTACGGCGTCTTGTGCAAAATACCTTGTTTATTGTTTAATCTAACTGCTTGTTTAAATT 35 25260355 0.738979637 11 29 279 0.795918367 1.290034611 0.020408163 0.285714286 0.489795918 35 9 1 39 3R:25260329-25260403 6 25.5 2606 FBgn0039303 1484.506667 100.39 153.7466667 0.017177424 0.254009363 0.165857254 1 2 1.5 0.2 dme-miR-12-5p 6mer3-8 AATACT 3R 25260455 25260460 + 3R_25260455_25260460_+ 0.999886705 0.999998643 0.999942674 7.91E-05 CG11857 FBtr0084814 25260035 25260759 3R + 25260424 25260488 3'utr CG11857 FlyBase G45797.1 TCTATCTATTGTAAATCCCAAACGATACCGAAATACTGCAGATCAGCTCTAATTTAGTTTTTCAT 35 25260449 0.923555346 7 33 215 0.952380952 1.602059991 0.166666667 0.171428571 0.30952381 35 2 0 40 3R:25260424-25260488 6 CG11857 FBtr0084814 25260035 25260759 AATACT 6mer3-8 dme-miR-12-5p 3R + 25260434 25260489 3'utr CG11857 FlyBase G34547.1 GTAAATCCCAAACGATACCGAAATACTGCAGATCAGCTCTAATTTAGTTTTTCATC 17 25260457 0.70451467 5 16 85 0.958333333 1.361727836 0.041666667 0.352941176 0.541666667 17 1 0 23 3R:25260434-25260489 6 23.5 2607 FBgn0039303 1484.506667 100.39 153.7466667 0.015830175 0.23408706 0.152848842 6 -2 2 0.2 dme-miR-8-3p 6mer2-7 AGTATT 3R 25261224 25261229 - 3R_25261224_25261229_- 0.999985559 0.999887402 0.99993648 6.94E-05 CG10425 FBtr0084867 25260961 25261255 3R - 25261203 25261247 3'utr CG10425 FlyBase G54611.1 TTGTCCCGCTGCCCTTAAAGTATTCCCAAGTGCCCATAATTAAAT 13 25261226 0.620116571 7 12 86 0.923076923 1.079181246 0.076923077 0 0 13 1 0 12 3R:25261203-25261247 6 CG10425 FBtr0084867 25260961 25261255 AGTATT 6mer2-7 dme-miR-8-3p 3R - 25261202 25261269 stop_codon CG10425 FlyBase G41225.1 TGGAGTCCAAGTGAAATCTCTCTTGTCCCGCTGCCCTTAAAGTATTCCCAAGTGCCCATAATTAAATC 12 25261225 0.984016065 5 10 76 0.851851852 1.361727836 0.407407407 0.833333333 0.925925926 12 4 0 23 3R:25261202-25261269 6 11 2608 FBgn0039304 196.3333333 17.07333333 25.98666667 0.056027165 0.644279578 0.423293997 -3 -4 -3.5 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 25303944 25303951 + 3R_25303944_25303951_+ 0.48851078 0.485831536 0.487171158 0.001894551 CG31370 FBtr0290055 25303865 25303986 3R + 25303926 25303984 3'utr CG31370 FlyBase G45812.1 ATGAGCGTTCCATTATATGTACTTAATAAAGTGTATAAGGCTATTGTTTTGATATCGCT 20 25303943 0.933594614 3 17 182 0.88 1.041392685 0.32 0.25 0.4 20 2 1 22 3R:25303926-25303984 8 CG31370 FBtr0290055 25303865 25303986 GTACTTAA 8mer-A1 dme-miR-252-5p 3R + 25303927 25303973 3'utr CG31370 FlyBase G34556.1 TGAGCGTTCCATTATATGTACTTAATAAAGTGTATAAGGCTATTGTT 18 25303943 0.765026138 3 17 153 0.914285714 1.505149978 0.314285714 0.555555556 0.771428571 18 3 0 32 3R:25303927-25303973 8 15.5 2609 FBgn0051370 220 19.25 29.63 0.070454545 0.805194805 0.523118461 1 1 1 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3R 25331532 25331538 - 3R_25331532_25331538_- 0.519304953 0.520874108 0.520089531 0.001109521 CG10669 FBtr0300687 25331361 25331774 3R - 25331507 25331559 3'utr CG10669 FlyBase G54646.1 TAATAAATTAAAACAATACTGTGTGATTAAAAGGGGAATAGTTTGTAGTTTGT 29 25331540 0.722624947 6 27 190 0.939393939 1.491361694 0.090909091 0.137931034 0.242424242 29 2 0 31 3R:25331507-25331559 7 CG10669 FBtr0300687 25331361 25331774 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 25331508 25331556 3'utr CG10669 FlyBase G41251.1 TAAATTAAAACAATACTGTGTGATTAAAAGGGGAATAGTTTGTAGTTTG 19 25331540 0.972831485 4 16 140 0.791666667 1.278753601 0.083333333 0.263157895 0.416666667 19 5 0 19 3R:25331508-25331556 7 22.5 2610 FBgn0039329 90.66666667 3.293333333 4.993333333 0.248161765 6.831983806 4.506008011 2 2 2 0.2 dme-miR-988-3p 7mer-m8 ACAAGGG 3R 25340067 25340073 + 3R_25340067_25340073_+ 0.670680821 0.657013259 0.66384704 0.009664382 CG11902 FBtr0300735 25339910 25340088 3R + 25340055 25340087 3'utr CG11902 FlyBase G45830.1 AAAAATAAAATTACAAGGGTTACAAATAAACGA 12 25340074 0.758450375 2 12 50 1 1.176091259 0 0.166666667 0.333333333 12 0 0 15 3R:25340055-25340087 7 CG11902 FBtr0300735 25339910 25340088 ACAAGGG 7mer-m8 dme-miR-988-3p 3R + 25340044 25340084 3'utr CG11902 FlyBase G34568.1 AATGTAAAGATAAAAATAAAATTACAAGGGTTACAAATAAA 18 25340074 0.946825159 2 18 78 1 1.361727836 0 0.222222222 0.391304348 18 0 0 23 3R:25340044-25340084 7 15 2611 FBgn0028647 178 4.693333333 7.203333333 0.084269663 3.196022727 2.082369273 -7 -7 -7 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 25486395 25486401 - 3R_25486395_25486401_- 0.562020554 0.635683717 0.598852136 0.052087678 Dhap-at FBtr0084897|FBtr0330374 25485616|25485616 25486603|25486603 3R - 25486306 25486425 3'utr Dhap-at FlyBase G54700.1 TCATCGTGGTGTTGTCGCCGCTGTGGCAGCTGCTCCACTGGATCATCGTATCCACCCACTCATTCACGTAGGTTAACGGGGTGTCTGGTTAGGATGGGTCGATACTAATAGTATCCTATT 16 25486402 0.982202586 6 14 111 0.857142857 0.954242509 0.047619048 0.25 0.428571429 16 2 1 18 3R:25486306-25486425 7 Dhap-at FBtr0330374|FBtr0084897 25485616|25485616 25486603|25486603 GGCAGCT 7mer-m8 dme-miR-980-3p 3R - 25486343 25486423 3'utr Dhap-at FlyBase G41290.1 ATCGTGGTGTTGTCGCCGCTGTGGCAGCTGCTCCACTGGATCATCGTATCCACCCACTCATTCACGTAGGTTAACGGGGTG 14 25486402 0.972233932 6 14 85 1 1.176091259 0.133333333 0.071428571 0.133333333 14 0 0 15 3R:25486343-25486423 7 10.5 2612 FBgn0040212 241.5966667 8.49 13.08666667 0.043460865 1.236749117 0.802343352 1 1 1 0.2 dme-miR-14-3p 7mer-m8 AAGACTG 3R 25493192 25493198 + 3R_25493192_25493198_+ 0.670011281 0.669888751 0.669950016 8.66E-05 CG5112 FBtr0084878 25493128 25493262 3R + 25493133 25493204 3'utr CG5112 FlyBase G45851.1 GTTTATGATGTATGATCGATCAACTTATTGTTAGAGAACATAGGGTGTGGGTAACGCTGAAGACTGTCGCTT 33 25493190 0.970304922 10 30 174 0.918918919 1.531478917 0.378378378 0.090909091 0.189189189 33 3 0 34 3R:25493133-25493204 7 CG5112 FBtr0084878 25493128 25493262 AAGACTG 7mer-m8 dme-miR-14-3p 3R + 25493136 25493204 3'utr CG5112 FlyBase G34581.1 TATGATGTATGATCGATCAACTTATTGTTAGAGAACATAGGGTGTGGGTAACGCTGAAGACTGTCGCTT 30 25493190 0.966748859 10 30 163 1 1.602059991 0.25 0.3 0.475 30 0 0 40 3R:25493136-25493204 7 25 2613 FBgn0039341 334.3133333 22.37333333 33.99666667 0.074780146 1.117401669 0.735366212 2 2 2 0.2 dme-miR-304-5p 8mer-A1 TGAGATTA 3R 25493955 25493962 - 3R_25493955_25493962_- 0.624730291 0.624852806 0.624791549 8.66E-05 CG33494 FBtr0089607|FBtr0336802 25493577|25493479 25494014|25494014 3R - 25493909 25494021 stop_codon CG33494 FlyBase G54708.1 TGGGTAACCAGTTCCAAAGTCCACTTAGTCTTTGCTCTCGAATCGGTCATCCAAGCCTTTGAGATTACATTTAAATATGTCATGAAATACATAGCATGATATACATACATATA 64 25493963 0.9826232 14 60 522 0.930555556 1.826074803 0.125 0.109375 0.208333333 64 5 0 67 3R:25493909-25494021 8 CG33494 FBtr0336802|FBtr0089607 25493479|25493577 25494014|25494014 TGAGATTA 8mer-A1 dme-miR-304-5p 3R - 25493947 25494006 3'utr CG33494 FlyBase G41296.1 AAAGTCCACTTAGTCTTTGCTCTCGAATCGGTCATCCAAGCCTTTGAGATTACATTTAAA 25 25493963 0.763605717 8 22 199 0.921052632 1.243038049 0.131578947 0.4 0.605263158 25 2 1 35 3R:25493947-25494006 8 32 2614 FBgn0053494 1664.706667 279.3966667 423.6866667 0.019222606 0.114532505 0.075527512 1 1 1 0.2 dme-miR-8-3p 7mer-A1 AGTATTA 3R 25600961 25600967 + 3R_25600961_25600967_+ 0.822340661 0.818600583 0.820470622 0.00264465 msi FBtr0305219|FBtr0333664|FBtr0084881|FBtr0333665|FBtr0084882|FBtr0333663|FBtr0305218 25600746|25600746|25600746|25600746|25600746|25600746|25600746 25601136|25608423|25601136|25601136|25602421|25601136|25601136 3R + 25600901 25600982 5'utr msi FlyBase G45863.1 GAAGTTGGTTTTCCTTTGAGTTTGGCTAAGTTAGTAGTCCGATACACGGAAGGCAAATTAAGTATTATATTTAAGGCGCCCT 20 25600958 0.916346268 9 19 162 0.956521739 1.342422681 0.304347826 0.15 0.260869565 20 1 0 22 3R:25600901-25600982 7 msi FBtr0333663|FBtr0305218|FBtr0084882|FBtr0084881|FBtr0333665|FBtr0305219|FBtr0333664 25600746|25600746|25600746|25600746|25600746|25600746|25600746 25601136|25601136|25602421|25601136|25601136|25601136|25608423 AGTATTA 7mer-A1 dme-miR-8-3p 3R + 25600914 25600972 5'utr msi FlyBase G34587.1 CTTTGAGTTTGGCTAAGTTAGTAGTCCGATACACGGAAGGCAAATTAAGTATTATATTT 7 25600958 0.899608728 6 7 52 1 1.113943352 0.076923077 0.571428571 0.769230769 7 0 0 13 3R:25600914-25600972 7 7 2615 FBgn0011666 1019.796667 32.88 50.09666667 0.006864113 0.212895377 0.139729856 3 3 3 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 25601698 25601705 + 3R_25601698_25601705_+ 0.499763689 0.499940738 0.499852213 0.000125158 msi FBtr0333664|FBtr0084882 25600746|25600746 25608423|25602421 3R + 25601676 25601729 3'utr msi FlyBase G45869.1 CTATCTACCCAAATCTGTTATTGTACTTAATTATATAACAATTACAAATACCAC 38 25601697 0.760864444 5 38 424 1 1.681241237 0.020833333 0.184210526 0.354166667 38 0 0 48 3R:25601676-25601729 8 msi FBtr0084882|FBtr0333664 25600746|25600746 25602421|25608423 GTACTTAA 8mer-A1 dme-miR-252-5p 3R + 25601668 25601720 3'utr msi FlyBase G34590.1 CCTACCTTCTATCTACCCAAATCTGTTATTGTACTTAATTATATAACAATTAC 24 25601697 0.956187348 5 24 260 1 1.579783597 0 0.375 0.605263158 24 0 0 38 3R:25601668-25601720 8 30 2616 FBgn0011666 1019.796667 32.88 50.09666667 0.029417629 0.912408759 0.598842238 1 1 1 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 3R 25602762 25602769 + 3R_25602762_25602769_+ 0.634907044 0.626298667 0.630602856 0.006086987 msi FBtr0333664 25600746 25608423 3R + 25602742 25602788 3'utr msi FlyBase G45874.1 AATGTAATATTGTTTCGTATACCAAAGATAACGCATATTAACCCAAA 71 25602761 0.877322409 4 64 465 0.913043478 1.924279286 0.163043478 0.197183099 0.380434783 71 8 0 84 3R:25602742-25602788 8 msi FBtr0333664 25600746 25608423 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 25602721 25602784 3'utr msi FlyBase G34593.1 TTCGACTCGGGGGGTGAGTATAATGTAATATTGTTTCGTATACCAAAGATAACGCATATTAACC 54 25602761 0.977073429 4 51 335 0.933333333 1.84509804 0.173333333 0.277777778 0.48 54 5 0 70 3R:25602721-25602784 8 61.5 2617 FBgn0011666 1019.796667 32.88 50.09666667 0.060306139 1.870437956 1.227626589 1 1 1 0.2 dme-miR-263a-5p 8mer-m1 GTGCCATT 3R 25602908 25602915 + 3R_25602908_25602915_+ 0.536313999 0.483118132 0.509716065 0.037615182 msi FBtr0333664 25600746 25608423 3R + 25602803 25602924 3'utr msi FlyBase G45875.1 GCTGGGCCTAAGTCGAGGCTCAAATACCACATCTCCATTTGCAGAAACTAATTTATTTATTTATTATTTACGCTTAAGAATCTAACACATTCCAGACATGCTATGGTGCCATTTACTTATCC 35 25602906 0.951635923 12 34 266 0.976190476 1.612783857 0.023809524 0.171428571 0.30952381 35 1 0 41 3R:25602803-25602924 8 msi FBtr0333664 25600746 25608423 GTGCCATT 8mer-m1 dme-miR-263a-5p 3R + 25602857 25602916 3'utr msi FlyBase G34594.1 ATTTATTTATTATTTACGCTTAAGAATCTAACACATTCCAGACATGCTATGGTGCCATTT 19 25602906 0.715734264 6 19 127 1 1.431363764 0 0.315789474 0.518518519 19 0 0 27 3R:25602857-25602916 8 16 2618 FBgn0011666 1019.796667 32.88 50.09666667 0.015689402 0.486618005 0.319382527 2 2 2 0.2 dme-bantam-3p 6mer2-7 GATCTC 3R 25602961 25602966 + 3R_25602961_25602966_+ 0.862867491 0.947361634 0.905114563 0.059746351 msi FBtr0333664 25600746 25608423 3R + 25602943 25603021 3'utr msi FlyBase G45876.1 TTTTTAACTCGTCTGTCAGATCTCGATCTCAGAACAATTGCTTTTAGCATAAGGTTGATTTTACCCTGCCAATCCAAGA 46 25602964 0.780918125 10 41 292 0.903225806 1.748188027 0.016129032 0.282608696 0.467741935 46 6 0 56 3R:25602943-25603021 6 msi FBtr0333664 25600746 25608423 GATCTC 6mer2-7 dme-bantam-3p 3R + 25602947 25602999 3'utr msi FlyBase G34595.1 TAACTCGTCTGTCAGATCTCGATCTCAGAACAATTGCTTTTAGCATAAGGTTG 30 25602964 0.660960243 11 28 194 0.921052632 1.06694679 0.210526316 0.233333333 0.394736842 30 1 2 35 3R:25602947-25602999 6 32 2619 FBgn0011666 1019.796667 32.88 50.09666667 0.031378804 0.97323601 0.638765054 -3 -3 -3 0.2 dme-miR-33-5p 6mer2-7 AATGCA 3R 25653206 25653211 - 3R_25653206_25653211_- 0.77572559 0.672571865 0.724148727 0.072940681 Tnks FBtr0330383|FBtr0084890 25653089|25653089 25653514|25654531 3R - 25653198 25653236 3'utr Tnks FlyBase G54731.1 CGAGGTTACAAGTTCTTTGCCGATGAATGCATTACATTA 9 25653213 0.968433525 5 8 64 0.888888889 0.903089987 0 0 0 9 1 0 8 3R:25653198-25653236 6 Tnks FBtr0330383|FBtr0084890 25653089|25653089 25653514|25654531 AATGCA 6mer2-7 dme-miR-33-5p 3R - 25653198 25653241 3'utr Tnks FlyBase G41316.1 TTATACGAGGTTACAAGTTCTTTGCCGATGAATGCATTACATTA 8 25653205 0.866970566 4 8 62 1 1.146128036 0.071428571 0.375 0.642857143 8 0 0 14 3R:25653198-25653241 6 7 2620 FBgn0027508 387.6333333 8.48 12.93666667 0.018058303 0.825471698 0.541097655 2 -6 -2 0.2 dme-bantam-3p 7mer-m8 TGATCTC 3R 25653482 25653488 - 3R_25653482_25653488_- 0.660771369 0.660951031 0.6608612 0.000126996 Tnks FBtr0330383|FBtr0084890 25653089|25653089 25653514|25654531 3R - 25653430 25653522 stop_codon Tnks FlyBase G54733.1 AGTTGTGACGGTGGTACGACATGCTGGTGGTTATTGATCTCTATGTCTCCGTTGGCCTCCCGTCTATTTTATTACAATTACTAGCTATAGATG 352 25653489 0.713909296 21 327 3618 0.926108374 2.274157849 0.201970443 0.136363636 0.251231527 352 29 1 376 3R:25653430-25653522 7 Tnks FBtr0330383|FBtr0084890 25653089|25653089 25653514|25654531 TGATCTC 7mer-m8 dme-bantam-3p 3R - 25653448 25653518 stop_codon Tnks FlyBase G41319.1 GTGACGGTGGTACGACATGCTGGTGGTTATTGATCTCTATGTCTCCGTTGGCCTCCCGTCTATTTTATTAC 233 25653489 0.663587543 15 213 2298 0.933884298 1.928139707 0.201101928 0.407725322 0.619834711 233 21 3 339 3R:25653448-25653518 7 262.5 2621 FBgn0027508 387.6333333 8.48 12.93666667 0.677186344 30.95518868 20.29116207 1 1 1 0.2 dme-miR-33-5p 6mer3-8 CAATGC 3R 25653600 25653605 - 3R_25653600_25653605_- 0.991080214 0.99848523 0.994782722 0.005236126 Tnks FBtr0084890 25653089 25654531 3R - 25653553 25653675 3'utr Tnks FlyBase G54734.1 GAGCCGGGCACGGGAATGCTCCGTACAGCAGCTCGCTGCAACATCATCGACTAAGACGCTGTTCGTCGTACAATGCGGAGAATGCCTACGAGCACTTTGCGGCCCCCTTCAAGGCGCGCAAGA 12 25653593 0.943599686 8 11 45 1 1.041392685 0.272727273 0 0 11 0 0 11 3R:25653553-25653675 6 Tnks FBtr0084890 25653089 25654531 CAATGC 6mer3-8 dme-miR-33-5p 3R - 25653567 25653623 3'utr Tnks FlyBase G41320.1 AAGACGCTGTTCGTCGTACAATGCGGAGAATGCCTACGAGCACTTTGCGGCCCCCTT 8 25653593 0.950260607 3 6 28 0.818181818 0.954242509 0 0.25 0.454545455 8 2 0 9 3R:25653567-25653623 6 5 2622 FBgn0027508 387.6333333 8.48 12.93666667 0.012898788 0.589622642 0.386498325 -12 -12 -12 0.2 dme-bantam-3p 6mer2-7 GATCTC 3R 25664877 25664882 + 3R_25664877_25664882_+ 0.948884247 0.927282649 0.938083448 0.015274638 RASSF8 FBtr0084898 25664654 25665640 3R + 25664850 25664976 3'utr RASSF8 FlyBase G45891.1 ATGTTTACATTCCAATCACACTCTATGGATCTCTCAATGCAATGATATATGTTACAAATTTGAAATCACAATCGTTTTATTACTCTACATTCCGCACTGTACTTTGTATTTAATAGTAGTTAATGAG 460 25664873 0.731628957 19 451 3253 0.981718464 2.42894429 0.219378428 0.169565217 0.301645338 460 9 1 537 3R:25664850-25664976 6 RASSF8 FBtr0084898 25664654 25665640 GATCTC 6mer2-7 dme-bantam-3p 3R + 25664855 25664912 3'utr RASSF8 FlyBase G34608.1 TACATTCCAATCACACTCTATGGATCTCTCAATGCAATGATATATGTTACAAATTTGA 266 25664873 0.733875348 8 259 1826 0.9825 2.117271296 0.1825 0.383458647 0.59 266 5 2 393 3R:25664855-25664912 6 347 2623 FBgn0261986 768.6366667 27.28 42.04333333 0.451448669 12.71994135 8.25338936 4 4 4 0.2 dme-miR-252-5p 8mer-m1 GTACTTAG 3R 25665245 25665252 + 3R_25665245_25665252_+ 0.631362736 0.634196829 0.632779783 0.002004011 RASSF8 FBtr0084898 25664654 25665640 3R + 25665211 25665295 3'utr RASSF8 FlyBase G45893.1 TAGAATTCACAATTCGAATTACACAAAACTTATTGTACTTAGCAATTAGCGCAGCTTTAAAAAAACAAATTAGCAATGCTTTGTT 13 25665244 0.971758721 7 13 78 1 1.204119983 0.0625 0.153846154 0.3125 13 0 0 16 3R:25665211-25665295 8 RASSF8 FBtr0084898 25664654 25665640 GTACTTAG 8mer-m1 dme-miR-252-5p 3R + 25665233 25665275 3'utr RASSF8 FlyBase G34611.1 ACAAAACTTATTGTACTTAGCAATTAGCGCAGCTTTAAAAAAA 7 25665243 0.761161954 4 7 41 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 3R:25665233-25665275 8 7.5 2624 FBgn0261986 768.6366667 27.28 42.04333333 0.009757536 0.274926686 0.178387378 1 2 1.5 0.2 dme-miR-7-5p 6mer3-8 GTCTTC 3R 25679281 25679286 + 3R_25679281_25679286_+ 0.909132584 0.909257121 0.909194852 8.80E-05 CG5039 FBtr0084900 25679239 25679529 3R + 25679224 25679335 stop_codon CG5039 FlyBase G45896.1 ACGCCTCCAATGCCTAGTGAATCTCAAAAGTCTTCCATACACTTTATTGTCCACGTTGTCTTCAAACGGTGGTTGTCATCGGTTTAGTTACTACTGCAAACTACGTGCCTCT 45 25679279 0.983528738 8 42 330 0.962962963 1.414973348 0.203703704 0.2 0.333333333 45 1 1 52 3R:25679224-25679335 6 CG5039 FBtr0084900 25679239 25679529 GTCTTC 6mer3-8 dme-miR-7-5p 3R + 25679223 25679323 stop_codon CG5039 FlyBase G34614.1 AACGCCTCCAATGCCTAGTGAATCTCAAAAGTCTTCCATACACTTTATTGTCCACGTTGTCTTCAAACGGTGGTTGTCATCGGTTTAGTTACTACTGCAAA 31 25679279 0.824513547 7 30 244 0.977272727 1.633468456 0.318181818 0.322580645 0.522727273 31 1 0 43 3R:25679223-25679323 6 18 2625 FBgn0039356 51.46666667 9.296666667 14.23333333 0.349740933 1.936177842 1.264637002 2 2 2 0.2 dme-miR-317-3p 8mer-A1 TGTGTTCA 3R 25683350 25683357 + 3R_25683350_25683357_+ 0.62991363 0.630668339 0.630290985 0.000533653 CG5028 FBtr0113289 25683087 25683780 3R + 25683310 25683381 3'utr CG5028 FlyBase G45907.2 AACCCAAACAAAATATGTTACCCCGGCTAAATGTCCATTGTGTGTTCATTCGATGTCCAAGTGTGATAATTC 12 25683348 0.916947305 9 11 80 0.866666667 1.113943352 0.2 0.166666667 0.333333333 12 2 0 13 3R:25683310-25683381 8 CG5028 FBtr0113289 25683087 25683780 TGTGTTCA 8mer-A1 dme-miR-317-3p 3R + 25683332 25683383 3'utr CG5028 FlyBase G34623.1 CCGGCTAAATGTCCATTGTGTGTTCATTCGATGTCCAAGTGTGATAATTCAG 8 25683348 0.778352957 5 8 69 1 1 0.5 0.25 0.4 8 0 0 10 3R:25683332-25683383 8 6 2626 FBgn0039358 738.9366667 46.93 71.87666667 0.008119776 0.127849989 0.083476325 2 2 2 0.2 dme-miR-276a-3p 6mer2-7 GTTCCT 3R 25698848 25698853 - 3R_25698848_25698853_- 0.98987314 0.987867597 0.988870369 0.001418103 LpR2 FBtr0113387|FBtr0113385|FBtr0113384 25698725|25698725|25698725 25699984|25699984|25699984 3R - 25698791 25698874 3'utr LpR2 FlyBase G54761.1 AATGTGTATTGGCAATTTTTGGTTCCTGTAAAATGTATTTTAATTTAAGCATGAAAAGTATTTGCTTTAATGCTTTTTTGAAAC 55 25698855 0.993485907 10 50 625 0.898305085 1.423245874 0.152542373 0.072727273 0.13559322 55 5 1 53 3R:25698791-25698874 6 LpR2 FBtr0113387|FBtr0113385|FBtr0113384 25698725|25698725|25698725 25699984|25699984|25699984 GTTCCT 6mer2-7 dme-miR-276a-3p 3R - 25698801 25698874 3'utr LpR2 FlyBase G41345.1 AATGTGTATTGGCAATTTTTGGTTCCTGTAAAATGTATTTTAATTTAAGCATGAAAAGTATTTGCTTTAATGCT 47 25698855 0.991830186 7 46 513 0.985294118 1.826074803 0.102941176 0.382978723 0.573529412 47 1 0 67 3R:25698801-25698874 6 48.5 2627 FBgn0051092 94.66666667 3.816666667 5.916666667 0.512323944 12.70742358 8.197183099 2 2 2 0.2 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 25699011 25699017 - 3R_25699011_25699017_- 0.702613259 0.696085445 0.699349352 0.004615922 LpR2 FBtr0113387|FBtr0113385|FBtr0113384 25698725|25698725|25698725 25699984|25699984|25699984 3R - 25698949 25699045 3'utr LpR2 FlyBase G54762.1 TTTCTTTCTTGGGTATTCAAAACAATTTGCTGTGATCAGTTTAAAAGCATTAGACCTGCATTAAATCATCTTATTCGTAGTGATTTTACTATTCTTC 537 25699019 0.773574578 19 522 4419 0.969984202 1.788168371 0.120063191 0.143389199 0.273301738 537 10 9 614 3R:25698949-25699045 7 LpR2 FBtr0113387|FBtr0113385|FBtr0113384 25698725|25698725|25698725 25699984|25699984|25699984 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R - 25698908 25699044 3'utr LpR2 FlyBase G41346.1 TTCTTTCTTGGGTATTCAAAACAATTTGCTGTGATCAGTTTAAAAGCATTAGACCTGCATTAAATCATCTTATTCGTAGTGATTTTACTATTCTTCATTTATTTAGTGTATAAACAAGCTTTCAATCATTTTAACTT 355 25699019 0.764855459 19 343 2872 0.970260223 1.939519253 0.128252788 0.397183099 0.602230483 355 11 5 522 3R:25698908-25699044 7 425 2628 FBgn0051092 94.66666667 3.816666667 5.916666667 4.48943662 111.3537118 71.83098592 2 2 2 0.2 dme-miR-14-3p 8mer-A1 AAGACTGA 3R 25741857 25741864 - 3R_25741857_25741864_- 0.643020358 0.637329256 0.640174807 0.004024215 LpR1 FBtr0301467|FBtr0335236|FBtr0113480|FBtr0301470|FBtr0335235|FBtr0335237|FBtr0301469|FBtr0301466|FBtr0335238|FBtr0301471 25741346|25741346|25741346|25741346|25741346|25741346|25741346|25741346|25741346|25741346 25741979|25741979|25741979|25741979|25741979|25741979|25741979|25741979|25741979|25741979 3R - 25741836 25741878 3'utr LpR1 FlyBase G54784.1 AACACACACGCCTGAAGACTGAGCAACTCTGTGTATTGTGTAA 11 25741866 0.959682383 4 9 53 0.866666667 1.113943352 0.066666667 0.272727273 0.466666667 11 2 0 13 3R:25741836-25741878 8 LpR1 FBtr0335237|FBtr0335235|FBtr0301466|FBtr0301469|FBtr0335238|FBtr0301471|FBtr0301467|FBtr0335236|FBtr0113480|FBtr0301470 25741346|25741346|25741346|25741346|25741346|25741346|25741346|25741346|25741346|25741346 25741979|25741979|25741979|25741979|25741979|25741979|25741979|25741979|25741979|25741979 AAGACTGA 8mer-A1 dme-miR-14-3p 3R - 25741843 25741873 3'utr LpR1 FlyBase G41358.1 ACACGCCTGAAGACTGAGCAACTCTGTGTAT 5 25741866 0.904113456 2 4 19 0.833333333 0.698970004 0 0.2 0.333333333 5 1 0 5 3R:25741843-25741873 8 8 2629 FBgn0066101 6 0.153333333 0.226666667 1.333333333 52.17391304 35.29411765 2 2 2 0.2 dme-miR-2b-2-5p 7mer-A1 TGAAGAA 3R 25887418 25887424 + 3R_25887418_25887424_+ 0.747838743 0.803330407 0.775584575 0.039238557 SppL FBtr0084911|FBtr0344118|FBtr0084909|FBtr0300820|FBtr0300819|FBtr0084910 25887365|25887365|25887365|25887365|25887365|25887365 25888071|25888071|25888230|25888071|25888230|25887564 3R + 25887396 25887461 3'utr SppL FlyBase G45918.1 AAAAAACCAACAGCATACAATGTGAAGAACACACACACATAAGATCTAATACTAACGTTTGTCTCT 12 25887416 0.949648491 6 10 47 0.846153846 1.041392685 0.230769231 0.083333333 0.153846154 12 2 0 11 3R:25887396-25887461 7 SppL FBtr0084909|FBtr0300820|FBtr0300819|FBtr0084910|FBtr0084911|FBtr0344118 25887365|25887365|25887365|25887365|25887365|25887365 25888230|25888071|25888230|25887564|25888071|25888071 TGAAGAA 7mer-A1 dme-miR-2b-2-5p 3R + 25887393 25887479 3'utr SppL FlyBase G34631.1 AACAAAAAACCAACAGCATACAATGTGAAGAACACACACACATAAGATCTAATACTAACGTTTGTCTCTTAAATAACGTATTGAGTA 9 25887416 0.994121909 4 9 45 1 1.230448921 0.352941176 0.555555556 0.764705882 9 0 0 17 3R:25887393-25887479 7 5 2630 FBgn0039381 696.8266667 34.86 53.62333333 0.007175386 0.143430866 0.093242991 2 2 2 0.2 dme-miR-184-3p 7mer-m8 TCCGTCC 3R 25887949 25887955 + 3R_25887949_25887955_+ 0.660880163 0.660993076 0.660936619 7.98E-05 SppL FBtr0084911|FBtr0344118|FBtr0084909|FBtr0300820|FBtr0300819 25887365|25887365|25887365|25887365|25887365 25888071|25888071|25888230|25888071|25888230 3R + 25887916 25888043 3'utr SppL FlyBase G45924.1 AATCGAGATCCGTTTCCGTTTCACACGCTCATTTCCGTCCTTCGATTTTTTCGTTTTGTCACCCAATGTTTCCCACACATCTTCACAACCATAATGATGTTTTGCCAAAATGCATGTGTTCGTTGCAA 618 25887948 0.984084791 15 613 5045 0.990691489 2.872156273 0.167553191 0.165048544 0.313829787 618 7 0 745 3R:25887916-25888043 7 SppL FBtr0084909|FBtr0300820|FBtr0300819|FBtr0084911|FBtr0344118 25887365|25887365|25887365|25887365|25887365 25888230|25888071|25888230|25888071|25888071 TCCGTCC 7mer-m8 dme-miR-184-3p 3R + 25887922 25887976 3'utr SppL FlyBase G34634.1 GATCCGTTTCCGTTTCACACGCTCATTTCCGTCCTTCGATTTTTTCGTTTTGTCA 396 25887948 0.725859129 8 386 3013 0.977309562 2.002166062 0.141004862 0.396464646 0.612641815 396 9 5 603 3R:25887922-25887976 7 501 2631 FBgn0039381 696.8266667 34.86 53.62333333 0.718973633 14.37177281 9.342947722 1 1 1 0.2 dme-miR-317-3p 6mer2-7 GTGTTC 3R 25892477 25892482 + 3R_25892477_25892482_+ 0.999696294 0.939188493 0.969442394 0.042785476 Lnk FBtr0339162|FBtr0339161 25892042|25892042 25893270|25893270 3R + 25892456 25892495 3'utr Lnk FlyBase G45936.1 AAGTGATTACCATGAATTTGAGTGTTCGCCTAAAGACAAA 5 25892473 0.972335777 4 5 35 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 3R:25892456-25892495 6 Lnk FBtr0339161|FBtr0339162 25892042|25892042 25893270|25893270 GTGTTC 6mer2-7 dme-miR-317-3p 3R + 25892458 25892490 3'utr Lnk FlyBase G34641.1 GTGATTACCATGAATTTGAGTGTTCGCCTAAAG 5 25892473 0.726289796 3 4 38 0.666666667 0.602059991 0.166666667 0.2 0.333333333 5 2 0 4 3R:25892458-25892490 6 5 2632 FBgn0028717 647.6666667 24.78 37.87333333 0.007720021 0.201775626 0.132019011 4 4 4 0.2 dme-miR-263a-5p 8mer-m1 GTGCCATT 3R 25892861 25892868 + 3R_25892861_25892868_+ 0.456680128 0.50519208 0.480936104 0.034303164 Lnk FBtr0339160|FBtr0339162|FBtr0084937|FBtr0339161|FBtr0084935|FBtr0084936 25892801|25892042|25892801|25892042|25892801|25892801 25893270|25893270|25893270|25893270|25893270|25893270 3R + 25892826 25892871 3'utr Lnk FlyBase G45937.1 GCATTTCGCGGCTTAACCAGCGGAACTTTACTTTTGTGCCATTTTA 9 25892860 0.982325781 4 8 90 0.888888889 0.903089987 0 0 0 9 1 0 8 3R:25892826-25892871 8 Lnk FBtr0084935|FBtr0084936|FBtr0084937|FBtr0339161|FBtr0339160|FBtr0339162 25892801|25892801|25892801|25892042|25892801|25892042 25893270|25893270|25893270|25893270|25893270|25893270 GTGCCATT 8mer-m1 dme-miR-263a-5p 3R + 25892825 25892886 3'utr Lnk FlyBase G34642.1 TGCATTTCGCGGCTTAACCAGCGGAACTTTACTTTTGTGCCATTTTAATCATTGTCCTAAAG 8 25892860 0.993731794 4 5 65 0.8 1.079181246 0.066666667 0.5 0.733333333 8 3 0 12 3R:25892825-25892886 8 7 2633 FBgn0028717 647.6666667 24.78 37.87333333 0.010808029 0.282485876 0.184826615 1 1 1 0.2 dme-miR-317-3p 8mer-A1 TGTGTTCA 3R 25893028 25893035 + 3R_25893028_25893035_+ 0.630471978 0.630673218 0.630572598 0.00014227 Lnk FBtr0339160|FBtr0339162|FBtr0084937|FBtr0339161|FBtr0084935|FBtr0084936 25892801|25892042|25892801|25892042|25892801|25892801 25893270|25893270|25893270|25893270|25893270|25893270 3R + 25892917 25893043 3'utr Lnk FlyBase G45937.3 ATGTGCGTTCTTTGCTTTCTTGATTCACTTGTTTCTATTTTAGTTAGTACCTCTTTTGGAAGACATGAAGTAACTGAACATTATTATGTATACATTATATAGCTAAATGTGTGTGTTCATTTTAAGT 25 25893030 0.770772092 15 24 224 0.964285714 1.431363764 0.142857143 0.12 0.214285714 25 1 0 27 3R:25892917-25893043 8 Lnk FBtr0084935|FBtr0084936|FBtr0084937|FBtr0339161|FBtr0339160|FBtr0339162 25892801|25892801|25892801|25892042|25892801|25892042 25893270|25893270|25893270|25893270|25893270|25893270 TGTGTTCA 8mer-A1 dme-miR-317-3p 3R + 25893009 25893034 3'utr Lnk FlyBase G34644.1 CATTATATAGCTAAATGTGTGTGTTC 9 25893030 0.735286682 2 9 73 1 1.204119983 0.0625 0.444444444 0.6875 9 0 0 16 3R:25893009-25893034 7 9.5 2634 FBgn0028717 647.6666667 24.78 37.87333333 0.014668039 0.383373688 0.25083612 -2 -2 -2 0.2 dme-miR-968-5p 6mer3-8 ACTACT 3R 25894983 25894988 + 3R_25894983_25894988_+ 0.999975639 0.999999911 0.999987775 1.72E-05 CG5913 FBtr0084938 25894933 25895026 3R + 25894950 25894991 3'utr CG5913 FlyBase G45945.1 AATGTAGACCATAAACGACTGATCCTCTTGTAAACTACTAAC 54 25894961 0.812882482 8 48 285 0.916666667 1.138302698 0.1 0.111111111 0.2 54 2 3 55 3R:25894950-25894991 6 CG5913 FBtr0084938 25894933 25895026 ACTACT 6mer3-8 dme-miR-968-5p 3R + 25894942 25894992 3'utr CG5913 FlyBase G34651.1 TTCCCAAAAATGTAGACCATAAACGACTGATCCTCTTGTAAACTACTAACA 48 25894961 0.78499005 8 46 285 0.955223881 1.806179974 0.119402985 0.291666667 0.492537313 48 3 0 64 3R:25894942-25894992 6 11.5 2635 FBgn0039385 97.66666667 7.92 12.23 0.11774744 1.452020202 0.940310711 22 22 22 0.2 dme-miR-7-5p 8mer-A1 GTCTTCCA 3R 26022783 26022790 + 3R_26022783_26022790_+ 0.675336241 0.675325475 0.675330858 7.57E-06 E(spl)m3-HLH FBtr0084958 26022693 26023127 3R + 26022749 26022794 3'utr E(spl)m3-HLH FlyBase G45962.1 AATGGCTATTGACCGTTCTGCAACAAGATCCGTTGTCTTCCAAAGT 8 26022782 0.976566965 5 8 54 1 0.954242509 0.333333333 0.125 0.222222222 8 0 0 9 3R:26022749-26022794 8 E(spl)m3-HLH FBtr0084958 26022693 26023127 GTCTTCCA 8mer-A1 dme-miR-7-5p 3R + 26022762 26022796 3'utr E(spl)m3-HLH FlyBase G34665.1 CGTTCTGCAACAAGATCCGTTGTCTTCCAAAGTAA 5 26022783 0.614741982 3 5 34 1 0.84509804 0.571428571 0.2 0.428571429 5 0 0 7 3R:26022762-26022796 8 6 2636 FBgn0002609 41.66666667 4.113333333 6.463333333 0.144 1.458670989 0.928313564 1 0 0.5 0.2 dme-miR-980-3p 7mer-A1 GCAGCTA 3R 26049609 26049615 + 3R_26049609_26049615_+ 0.821543662 0.819986097 0.820764879 0.00110139 gro FBtr0337057|FBtr0305047|FBtr0339900 26048604|26048604|26048604 26049911|26049911|26049911 3R + 26049587 26049625 3'utr gro FlyBase G45976.1 AGTGTAAAATCCTATATTTTGAGCAGCTAAACCCAACAC 15 26049606 0.718880605 4 15 87 1 1.204119983 0 0.066666667 0.125 15 0 0 16 3R:26049587-26049625 7 gro FBtr0337057|FBtr0339900|FBtr0305047 26048604|26048604|26048604 26049911|26049911|26049911 GCAGCTA 7mer-A1 dme-miR-980-3p 3R + 26049593 26049626 3'utr gro FlyBase G34681.1 AAATCCTATATTTTGAGCAGCTAAACCCAACACA 6 26049606 0.944704627 2 6 32 1 0.954242509 0 0.5 0.666666667 6 0 0 9 3R:26049593-26049626 7 10.5 2637 FBgn0001139 2815.8 93.08 143.0433333 0.003728958 0.112806188 0.07340433 3 3 3 0.2 dme-miR-965-3p 7mer-m8 TACGCTT 3R 26054491 26054497 - 3R_26054491_26054497_- 0.620191817 0.620186222 0.62018902 3.96E-06 Dak1 FBtr0084976 26054235 26054574 3R - 26054476 26054616 stop_codon Dak1 FlyBase G54802.1 TTCGGGGAGGTGGAAAAGATATTTGTGGCCAGCGGCTTCTAGATTTCCTGTTCATATTCCGGTTATGTGTGTAGTGCTATCCTTACCTTTCATTTGTACCCTCTAAAAAAATACATATATACGCTTGTTAATAGTAATGCA 57 26054489 0.891698128 20 54 469 0.957142857 1.525044807 0.1 0.210526316 0.357142857 57 2 1 67 3R:26054476-26054616 7 Dak1 FBtr0084976 26054235 26054574 TACGCTT 7mer-m8 dme-miR-965-3p 3R - 26054477 26054552 3'utr Dak1 FlyBase G41368.1 ATGTGTGTAGTGCTATCCTTACCTTTCATTTGTACCCTCTAAAAAAATACATATATACGCTTGTTAATAGTAATGC 38 26054488 0.674912521 14 34 332 0.933333333 1.447158031 0.15 0.394736842 0.616666667 38 3 1 56 3R:26054477-26054552 7 22 2638 FBgn0028833 760.9966667 77.71 118.7166667 0.028909456 0.283103848 0.185315176 -8 -9 -8.5 0.2 dme-miR-965-3p 7mer-m8 TACGCTT 3R 26130354 26130360 + 3R_26130354_26130360_+ 0.617948068 0.615907519 0.616927794 0.001442922 CG31324 FBtr0333925 26129613 26130674 3R + 26130332 26130374 3'utr CG31324 FlyBase G45994.1 AGCATAATCAATGGAACCCTACTACGCTTTTCGCTTTATACAA 89 26130361 0.607114703 5 86 598 0.973684211 1.744292983 0.219298246 0.247191011 0.412280702 89 2 1 111 3R:26130332-26130374 7 CG31324 FBtr0333925 26129613 26130674 TACGCTT 7mer-m8 dme-miR-965-3p 3R + 26130332 26130374 3'utr CG31324 FlyBase G34699.1 AGCATAATCAATGGAACCCTACTACGCTTTTCGCTTTATACAA 72 26130361 0.615389224 4 70 490 0.963302752 2.021189299 0.174311927 0.402777778 0.605504587 72 4 0 105 3R:26130332-26130374 7 79.5 2639 FBgn0051324 1208.083333 49.80333333 76.73666667 0.065806719 1.596278696 1.036010599 -7 -7 -7 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3R 26184875 26184881 + 3R_26184875_26184881_+ 0.443119588 0.443130895 0.443125242 7.99E-06 CG31323 FBtr0084988|FBtr0307339 26184611|26184611 26187307|26184974 3R + 26184854 26184905 3'utr CG31323 FlyBase G45999.1 ATGGAATTCATCAAGCAATTATGTGATTTTTAAGCGAATACTTAACAACTAT 39 26184872 0.990043342 7 39 384 1 1.785329835 0 0.41025641 0.62295082 39 0 0 61 3R:26184854-26184905 7 CG31323 FBtr0307339|FBtr0084988 26184611|26184611 26184974|26187307 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 26184815 26184899 3'utr CG31323 FlyBase G34701.1 ACGCTCGGAAACACACTCTCTCTTACACACAATAACATTATGGAATTCATCAAGCAATTATGTGATTTTTAAGCGAATACTTAAC 31 26184872 0.990095896 11 28 285 0.909090909 1.602059991 0 0.290322581 0.5 31 4 0 40 3R:26184815-26184899 7 31 2640 FBgn0051323 9.51 0.34 0.533333333 3.259726604 91.17647059 58.125 3 3 3 0.2 dme-miR-980-3p 7mer-A1 GCAGCTA 3R 26233996 26234002 + 3R_26233996_26234002_+ 0.470547771 0.823343755 0.646945763 0.249464444 CG12290 FBtr0339612 26233100 26234700 3R + 26233913 26234018 3'utr CG12290 FlyBase G46014.1 CAGCAGTTAGTTAGCCTTTGGTTAGCCAACGGCTATTGGGCCATTAAGTCAATTTGCTTTTTAGAACACCGCGGGCATTGCGTGCAGCTAAATACCTCATTAGTTA 22 26233991 0.966719795 13 21 117 0.961538462 1.397940009 0.153846154 0.136363636 0.269230769 22 1 0 25 3R:26233913-26234018 7 CG12290 FBtr0339612 26233100 26234700 GCAGCTA 7mer-A1 dme-miR-980-3p 3R + 26233958 26234002 3'utr CG12290 FlyBase G34712.1 AAGTCAATTTGCTTTTTAGAACACCGCGGGCATTGCGTGCAGCTA 6 26233998 0.969751968 5 5 31 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3R:26233958-26234002 7 8 2641 FBgn0039419 2058.006667 56.21 86.04666667 0.003887257 0.14232343 0.092972805 5 -2 1.5 0.2 dme-miR-11-3p 7mer-m1 TGTGATG 3R 26234358 26234364 + 3R_26234358_26234364_+ 0.612024157 0.612058972 0.612041564 2.46E-05 CG12290 FBtr0339612 26233100 26234700 3R + 26234341 26234514 3'utr CG12290 FlyBase G46018.1 ATTTCAAAACCAATTATTGTGATGTTGAGCAAGGGGGCAACCAAGAATGTAATTTCGAAATGCATTAAAAATAACTTAAAACATGTATTAATAGTTATAATATATACAAGCTTATGTGTGTATACATACTTTACTAAATAGTGATATTTTTTCAAATTTATTCAACTGTCATTC 71 26234357 0.984499027 18 68 545 0.938271605 1.579783597 0.172839506 0.126760563 0.234567901 71 4 1 76 3R:26234341-26234514 7 CG12290 FBtr0339612 26233100 26234700 TGTGATG 7mer-m1 dme-miR-11-3p 3R + 26234311 26234382 3'utr CG12290 FlyBase G34715.1 ATTCATGCATGTGTGTCGGACAAAGGAAATATTTCAAAACCAATTATTGTGATGTTGAGCAAGGGGGCAACC 25 26234357 0.980170331 8 24 171 0.923076923 1.556302501 0.512820513 0.36 0.58974359 25 3 0 36 3R:26234311-26234382 7 38 2642 FBgn0039419 2058.006667 56.21 86.04666667 0.018464469 0.676036292 0.441620826 1 1 1 0.2 dme-miR-79-3p 7mer-m8 TAGCTTT 3R 26234580 26234586 + 3R_26234580_26234586_+ 0.41249215 0.608172145 0.510332148 0.138366584 CG12290 FBtr0339612 26233100 26234700 3R + 26234550 26234590 3'utr CG12290 FlyBase G46019.1 TAAAACCAAACCAAGTTCAATGTGACAAATTAGCTTTTAAT 12 26234570 0.971173251 3 12 72 1 1.230448921 0.235294118 0.333333333 0.529411765 12 0 0 17 3R:26234550-26234590 7 CG12290 FBtr0339612 26233100 26234700 TAGCTTT 7mer-m8 dme-miR-79-3p 3R + 26234560 26234596 3'utr CG12290 FlyBase G34716.1 CCAAGTTCAATGTGACAAATTAGCTTTTAATCCGAAA 9 26234579 0.760241708 3 8 73 0.909090909 0.698970004 0.181818182 0.222222222 0.363636364 9 0 1 10 3R:26234560-26234596 7 9 2643 FBgn0039419 2058.006667 56.21 86.04666667 0.004373164 0.160113859 0.104594406 10 1 5.5 0.2 dme-miR-184-5p 7mer-m8 TGATAAG 3R 26254725 26254731 - 3R_26254725_26254731_- 0.658999336 0.658997761 0.658998549 1.06E-06 Ald FBtr0084994|FBtr0339614 26254067|26254601 26255341|26255341 3R - 26254692 26254792 3'utr Ald FlyBase G54819.1 GATCCACTATGAAAATCGATGTTTTACCATTATTATTATTATTAAACTTTATATTTATGATTGATAAGTATAAGTGAAACAAATGACGAGAATAAACAAAC 12 26254709 0.992094115 9 10 114 0.769230769 1 0.230769231 0.083333333 0.153846154 12 3 0 10 3R:26254692-26254792 7 Ald FBtr0339614|FBtr0084994 26254601|26254067 26255341|26255341 TGATAAG 7mer-m8 dme-miR-184-5p 3R - 26254692 26254796 3'utr Ald FlyBase G41383.1 AAAAGATCCACTATGAAAATCGATGTTTTACCATTATTATTATTATTAAACTTTATATTTATGATTGATAAGTATAAGTGAAACAAATGACGAGAATAAACAAAC 13 26254761 0.989412884 9 12 114 1 1.301029996 0.05 0.384615385 0.6 13 0 0 20 3R:26254692-26254796 7 3 2644 FBgn0000064 2998.926667 179.2266667 272.1633333 0.001000358 0.016738581 0.011022793 -22 30 4 0.2 dme-miR-282-5p 6mer2-7 GAGGCT 3R 26254847 26254852 - 3R_26254847_26254852_- 0.999323829 0.999844053 0.999583941 0.000367908 Ald FBtr0084994|FBtr0339614 26254067|26254601 26255341|26255341 3R - 26254808 26254881 3'utr Ald FlyBase G54820.1 CAATCACTATCAGCAACACCTAAATGTATGAGGCTTGTAACATTGAAGTCGCACAACGTTTTTTGAATTTTTTT 186 26254853 0.914834612 10 185 1192 0.995495495 2.344392274 0.018018018 0.150537634 0.288288288 186 1 0 221 3R:26254808-26254881 6 Ald FBtr0339614|FBtr0084994 26254601|26254067 26255341|26255341 GAGGCT 6mer2-7 dme-miR-282-5p 3R - 26254826 26254876 3'utr Ald FlyBase G41384.1 ACTATCAGCAACACCTAAATGTATGAGGCTTGTAACATTGAAGTCGCACAA 67 26254853 0.946240926 8 67 408 1 2.012837225 0 0.417910448 0.621359223 67 0 0 103 3R:26254826-26254876 6 125 2645 FBgn0000064 2998.926667 179.2266667 272.1633333 0.041681579 0.697440857 0.459283029 1 1 1 0.2 dme-miR-2a-2-5p 7mer-m8 TGATGAG 3R 26255088 26255094 - 3R_26255088_26255094_- 0.64769891 0.652969348 0.650334129 0.003726736 Ald FBtr0084994|FBtr0339614 26254067|26254601 26255341|26255341 3R - 26255067 26255122 3'utr Ald FlyBase G54822.1 TATAACATTATTTTAGAGAACAACTAAATGATGAGTGCAGAAGAAAGGATTGAATA 25 26255092 0.73773295 5 24 106 1 1.477121255 0 0.16 0.3 25 0 0 30 3R:26255067-26255122 7 Ald FBtr0339614|FBtr0084994 26254601|26254067 26255341|26255341 TGATGAG 7mer-m8 dme-miR-2a-2-5p 3R - 26255053 26255110 3'utr Ald FlyBase G41386.1 TTAGAGAACAACTAAATGATGAGTGCAGAAGAAAGGATTGAATATGTTCGATGGAGAA 15 26255092 0.924426397 7 15 54 1 1.278753601 0.368421053 0.2 0.368421053 15 0 0 19 3R:26255053-26255110 7 17.5 2646 FBgn0000064 2998.926667 179.2266667 272.1633333 0.005835421 0.09764172 0.064299624 -2 -2 -2 0.2 dme-miR-184-3p 6mer3-8 TCCGTC 3R 26256258 26256263 - 3R_26256258_26256263_- 0.702379369 0.750898201 0.726638785 0.034307972 Ald FBtr0114544|FBtr0085000 26255964|26255964 26256527|26256527 3R - 26256240 26256288 3'utr Ald FlyBase G54829.1 AGGGTATTTACGTGCCCGGCTCAATTCCGTCGTTTGCCGGCAATGCCAA 84 26256264 0.789324862 3 84 576 1 1.968482949 0.268817204 0.107142857 0.193548387 84 0 0 93 3R:26256240-26256288 6 Ald FBtr0085000|FBtr0114544 26255964|26255964 26256527|26256527 TCCGTC 6mer3-8 dme-miR-184-3p 3R - 26256235 26256288 3'utr Ald FlyBase G41391.1 AGGGTATTTACGTGCCCGGCTCAATTCCGTCGTTTGCCGGCAATGCCAACCTCT 33 26256264 0.796186436 3 33 241 1 1.643452676 0.136363636 0.242424242 0.431818182 33 0 0 44 3R:26256235-26256288 6 58.5 2647 FBgn0000064 2998.926667 179.2266667 272.1633333 0.019506979 0.326402321 0.214944457 1 1 1 0.2 dme-miR-1003-3p 8mer-A1 ATGTGAGA 3R 26453743 26453750 + 3R_26453743_26453750_+ 0.626227972 0.618013153 0.622120563 0.005808741 CG5447 FBtr0085012 26453708 26454585 3R + 26453708 26453821 stop_codon CG5447 FlyBase G46024.1 GACTTCCGCTTTCCCATTCAGCCAACGAGTTTTTCATGTGAGATCGAGCAGCTACAGTCGCATCAACAGGCATGTGAAGGAGAAGAGTCCGTTTCAGCAATTATCAAGCAAAAG 34 26453745 0.970220556 11 32 180 0.945945946 1.544068044 0.216216216 0.088235294 0.162162162 34 2 0 35 3R:26453708-26453821 8 CG5447 FBtr0085012 26453708 26454585 ATGTGAGA 8mer-A1 dme-miR-1003-3p 3R + 26453731 26453772 stop_codon CG5447 FlyBase G34720.1 AACGAGTTTTTCATGTGAGATCGAGCAGCTACAGTCGCATCA 13 26453745 0.711705003 4 12 74 0.952380952 1.301029996 0.19047619 0.461538462 0.666666667 13 1 0 20 3R:26453731-26453772 8 15 2648 FBgn0039427 734.0633333 64.46 98.42666667 0.020434204 0.232702451 0.152397724 -2 -2 -2 0.2 dme-miR-11-3p 7mer-m1 TGTGATG 3R 26469771 26469777 + 3R_26469771_26469777_+ 0.603404532 0.602333007 0.602868769 0.000757665 CG5455 FBtr0085015|FBtr0085016 26469401|26469401 26470008|26470008 3R + 26469603 26469788 3'utr CG5455 FlyBase G46036.1 CATATAATTATATACGCCTATCCATAGCTCAAGTTAGTTATACACATATTATGTTGCCTTTAGTTTAAGCTTAAAACGAGCAGATATATATGCTCAGACATCCCATCTGGTGTCAATGATATTTTGGAATTTTTGTGATCGATTGTGATCATTTTTCAAGCACTTTATTGTGATGATCCCCTAAAT 72 26469769 0.988761666 21 68 622 0.956521739 1.643452676 0.054347826 0.236111111 0.402173913 72 3 1 88 3R:26469603-26469788 7 CG5455 FBtr0085015|FBtr0085016 26469401|26469401 26470008|26470008 TGTGATG 7mer-m1 dme-miR-11-3p 3R + 26469695 26469786 3'utr CG5455 FlyBase G34735.1 CTCAGACATCCCATCTGGTGTCAATGATATTTTGGAATTTTTGTGATCGATTGTGATCATTTTTCAAGCACTTTATTGTGATGATCCCCTAA 47 26469770 0.987461187 15 45 402 0.970588235 1.342422681 0.220588235 0.361702128 0.558823529 47 0 2 66 3R:26469695-26469786 7 36 2649 FBgn0039430 151.6666667 6.406666667 9.843333333 0.237362637 5.619146722 3.657297663 2 1 1.5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 3R 26472059 26472066 - 3R_26472059_26472066_- 0.667566262 0.669782917 0.668674589 0.001567373 plum FBtr0302210|FBtr0305049|FBtr0302209|FBtr0344120 26471101|26470076|26471101|26471101 26472978|26472978|26472978|26472978 3R - 26472042 26472123 3'utr plum FlyBase G54845.1 AATTTCCGCATATTTACTGCTGCATTTTGTTTTGTTTACACAACCGATATATCAAATGTACCTGATTATATTCATTTTGCAT 674 26472067 0.985346554 9 664 5491 0.989384289 2.492294658 0.527600849 0.24925816 0.462845011 674 8 2 932 3R:26472042-26472123 8 plum FBtr0302210|FBtr0305049|FBtr0302209|FBtr0344120 26471101|26470076|26471101|26471101 26472978|26472978|26472978|26472978 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R - 26472044 26472092 3'utr plum FlyBase G41400.1 TTGTTTACACAACCGATATATCAAATGTACCTGATTATATTCATTTTGC 448 26472067 0.847330742 8 439 3595 0.98694517 2.878521796 0.54308094 0.407158837 0.654046997 447 10 0 756 3R:26472044-26472092 8 557.5 2650 FBgn0039431 3110.826667 52.34666667 80.39 0.179212814 10.65015283 6.934942157 1 1 1 0.2 dme-miR-282-5p 6mer2-7 GAGGCT 3R 26472560 26472565 - 3R_26472560_26472565_- 0.796527567 0.785146515 0.790837041 0.008047653 plum FBtr0302210|FBtr0305049|FBtr0302209|FBtr0344120 26471101|26470076|26471101|26471101 26472978|26472978|26472978|26472978 3R - 26472541 26472583 3'utr plum FlyBase G54846.1 TTGTTTTTTTCGTTAATTGAGGCTCATTTTTACATGTAACTTT 85 26472567 0.837523237 7 85 883 1 2.041392685 0.127272727 0.223529412 0.4 85 0 0 110 3R:26472541-26472583 6 plum FBtr0302210|FBtr0305049|FBtr0302209|FBtr0344120 26471101|26470076|26471101|26471101 26472978|26472978|26472978|26472978 GAGGCT 6mer2-7 dme-miR-282-5p 3R - 26472540 26472586 3'utr plum FlyBase G41401.1 TGTTTGTTTTTTTCGTTAATTGAGGCTCATTTTTACATGTAACTTTT 70 26472567 0.83958246 6 68 721 0.969072165 1.973127854 0.164948454 0.271428571 0.474226804 70 3 0 94 3R:26472540-26472586 6 77.5 2651 FBgn0039431 3110.826667 52.34666667 80.39 0.024912992 1.480514519 0.964050255 2 2 2 0.2 dme-miR-986-5p 7mer-A1 TTCGAGA 3R 26594944 26594950 + 3R_26594944_26594950_+ 0.822575698 0.821738883 0.822157291 0.000591707 scrib FBtr0308622|FBtr0308620|FBtr0335522|FBtr0308621|FBtr0308625 26594814|26594814|26594814|26594814|26594814 26595018|26596188|26596188|26596188|26596188 3R + 26594919 26594954 3'utr scrib FlyBase G46052.1 AGTGTTTATTTCGAACGAGACTTTTTTCGAGACTAA 7 26594942 0.730538459 2 6 49 0.875 0.84509804 0.25 0.142857143 0.25 7 1 0 7 3R:26594919-26594954 7 scrib FBtr0308625|FBtr0308621|FBtr0335522|FBtr0308620|FBtr0308622 26594814|26594814|26594814|26594814|26594814 26596188|26596188|26596188|26596188|26595018 TTCGAGA 7mer-A1 dme-miR-986-5p 3R + 26594926 26594959 3'utr scrib FlyBase G34742.1 ATTTCGAACGAGACTTTTTTCGAGACTAAGCTAC 8 26594942 0.975840858 3 7 52 1 0.954242509 0.222222222 0.125 0.222222222 8 0 0 9 3R:26594926-26594959 7 6.5 2652 FBgn0263289 2418.266667 41.02 62.81333333 0.002687876 0.158459288 0.103481214 2 2 2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 26595943 26595948 + 3R_26595943_26595948_+ 0.830351236 0.807856281 0.819103759 0.015906296 scrib FBtr0308620|FBtr0308620|FBtr0308620|FBtr0335522|FBtr0335522|FBtr0335522|FBtr0308621|FBtr0308621|FBtr0308621|FBtr0308625|FBtr0308625|FBtr0308625 26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814 26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188 3R + 26595928 26595993 3'utr scrib FlyBase G46054.1 TTTATATGTTAATATCTGTGAACAAAGCAACCACATAAATAAGAACTGCTTAACGATGTATTAAAA 85 26595942 0.794530027 8 83 489 0.981132075 2.017033339 0.132075472 0.188235294 0.349056604 85 2 0 104 3R:26595928-26595993 6 scrib FBtr0308625|FBtr0308625|FBtr0308625|FBtr0308621|FBtr0308621|FBtr0308621|FBtr0335522|FBtr0335522|FBtr0335522|FBtr0308620|FBtr0308620|FBtr0308620 26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814|26594814 26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188|26596188 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 26595931 26596014 3'utr scrib FlyBase G34743.1 ATATGTTAATATCTGTGAACAAAGCAACCACATAAATAAGAACTGCTTAACGATGTATTAAAATAACTACTGACTACGGTTATG 36 26595942 0.769942051 8 32 207 0.928571429 1.716003344 0.196428571 0.416666667 0.625 36 4 0 52 3R:26595931-26596014 6 49 2653 FBgn0263289 2418.266667 41.02 62.81333333 0.020262447 1.194539249 0.780089153 1 1 1 0.2 dme-miR-263a-5p 8mer-A1 GTGCCATA 3R 26596098 26596105 + 3R_26596098_26596105_+ 0.623339378 0.625461796 0.624400587 0.001500763 scrib FBtr0308620|FBtr0335522|FBtr0308621|FBtr0308625 26594814|26594814|26594814|26594814 26596188|26596188|26596188|26596188 3R + 26596043 26596121 3'utr scrib FlyBase G46055.1 CCATTACCATTACTATTATTAATCATCCACATATGTACGTATTTGTCATCGATTTGTGCCATACATATTTTATGTAACT 19 26596096 0.806837107 7 16 178 0.913043478 1.322219295 0 0.210526316 0.347826087 19 2 0 21 3R:26596043-26596121 8 scrib FBtr0308625|FBtr0308621|FBtr0335522|FBtr0308620 26594814|26594814|26594814|26594814 26596188|26596188|26596188|26596188 GTGCCATA 8mer-A1 dme-miR-263a-5p 3R + 26596081 26596122 3'utr scrib FlyBase G34744.1 GTATTTGTCATCGATTTGTGCCATACATATTTTATGTAACTC 20 26596097 0.739332137 6 20 184 1 1.447158031 0 0.3 0.5 20 0 0 28 3R:26596081-26596122 8 17.5 2654 FBgn0263289 2418.266667 41.02 62.81333333 0.007236588 0.42662116 0.278603269 2 1 1.5 0.2 dme-miR-2a-2-5p 7mer-m8 TGATGAG 3R 26715952 26715958 - 3R_26715952_26715958_- 0.585488105 0.580888179 0.583188142 0.00325262 CG6425 FBtr0085047 26715163 26716018 3R - 26715933 26716009 3'utr CG6425 FlyBase G54861.1 AGGTAACCAGCCCCTGAATACAATCAGCTTCCCTTCAGCGAGTACCAATTGTGATGAGCAAAGTTAGAGTTTAAGAT 76 26715961 0.748998765 8 70 433 0.936170213 1.245512668 0.489361702 0.184210526 0.340425532 76 2 4 88 3R:26715933-26716009 7 CG6425 FBtr0085047 26715163 26716018 TGATGAG 7mer-m8 dme-miR-2a-2-5p 3R - 26715883 26716002 3'utr CG6425 FlyBase G41414.1 CAGCCCCTGAATACAATCAGCTTCCCTTCAGCGAGTACCAATTGTGATGAGCAAAGTTAGAGTTTAAGATATTTCGTTTTGTTTCGCTTGACTTGCGTGCCCCCTTGCCTGAGCATTCTG 77 26715961 0.764524821 13 72 454 0.933333333 1.204119983 0.425 0.402597403 0.616666667 77 2 6 112 3R:26715883-26716002 7 61.5 2655 FBgn0039449 117.6666667 6.803333333 10.38 0.52266289 9.039686428 5.924855491 3 3 3 0.2 dme-miR-980-3p 6mer3-8 GGCAGC 3R 26784976 26784981 + 3R_26784976_26784981_+ 0.984162207 0.984509119 0.984335663 0.000245295 CG42790 FBtr0310469 26784837 26785753 3R + 26784960 26784994 3'utr CG42790 FlyBase G46066.1 ACACACCCATCTATTTGGCAGCCAGACTTTGATTC 15 26784974 0.723764838 3 14 78 0.941176471 1.204119983 0 0.133333333 0.235294118 15 1 0 16 3R:26784960-26784994 6 CG42790 FBtr0310469 26784837 26785753 GGCAGC 6mer3-8 dme-miR-980-3p 3R + 26784961 26784988 3'utr CG42790 FlyBase G34754.1 CACACCCATCTATTTGGCAGCCAGACTT 6 26784974 0.945017399 2 6 28 1 1 0 0.5 0.7 6 0 0 10 3R:26784961-26784988 6 10.5 2656 FBgn0261861 0.333333333 0.033333333 0.05 31.5 315 210 2 2 2 0.2 dme-miR-252-5p 7mer-m8 GTACTTA 3R 26842575 26842581 - 3R_26842575_26842581_- 0.525382365 0.53003033 0.527706348 0.003286562 Lerp FBtr0334310|FBtr0085099|FBtr0300939|FBtr0085097 26842460|26842460|26842460|26842460 26843181|26843181|26843181|26843181 3R - 26842554 26842706 3'utr Lerp FlyBase G54881.1 ATAACCAGTATAGCGCAGCAGCTTTTTCCTTCCATAAAAGATGTGATTTCATTTTTAAAACTTTCAAGTGCAGCTTGTTAGTGGTATTCCTTTGAAACGATTTGTATTTTACTCTAAGGCAATCTGTACTTACATTTATGTTTGTGTCTTGAG 126 26842582 0.978177495 19 122 1114 0.962962963 2.193124598 0.080246914 0.246031746 0.413580247 126 6 0 156 3R:26842554-26842706 7 Lerp FBtr0334310|FBtr0085099|FBtr0300939|FBtr0085097 26842460|26842460|26842460|26842460 26843181|26843181|26843181|26843181 GTACTTA 7mer-m8 dme-miR-252-5p 3R - 26842533 26842705 3'utr Lerp FlyBase G41428.1 TAACCAGTATAGCGCAGCAGCTTTTTCCTTCCATAAAAGATGTGATTTCATTTTTAAAACTTTCAAGTGCAGCTTGTTAGTGGTATTCCTTTGAAACGATTTGTATTTTACTCTAAGGCAATCTGTACTTACATTTATGTTTGTGTCTTGAGTTGTTTTTAGTTCAATAAGGC 80 26842582 0.987529309 15 78 706 0.982300885 2.045322979 0.03539823 0.3 0.504424779 80 2 0 111 3R:26842533-26842705 7 39 2657 FBgn0051072 373.47 12.92333333 19.75 0.104426058 3.017797266 1.974683544 1 1 1 0.2 dme-miR-1007-3p 6mer3-8 TGAGCT 3R 26842997 26843002 - 3R_26842997_26843002_- 0.886269004 0.925855037 0.90606202 0.027991529 Lerp FBtr0334310|FBtr0085099|FBtr0300939|FBtr0085097 26842460|26842460|26842460|26842460 26843181|26843181|26843181|26843181 3R - 26842961 26843033 3'utr Lerp FlyBase G54884.1 AGAAGACATTACTGAAAACTGGAACTGATTGTGAGCTAAACAAACCAATTGAAAACTAAAGAAAACCGTAGTA 39 26843005 0.962489045 8 37 187 0.94 1.371067862 0.12 0.256410256 0.42 39 2 1 47 3R:26842961-26843033 6 Lerp FBtr0334310|FBtr0085099|FBtr0300939|FBtr0085097 26842460|26842460|26842460|26842460 26843181|26843181|26843181|26843181 TGAGCT 6mer3-8 dme-miR-1007-3p 3R - 26842959 26843023 3'utr Lerp FlyBase G41431.1 ACTGAAAACTGGAACTGATTGTGAGCTAAACAAACCAATTGAAAACTAAAGAAAACCGTAGTAGA 33 26843005 0.958388219 8 30 156 0.9375 1.176091259 0.083333333 0.303030303 0.520833333 33 1 2 45 3R:26842959-26843023 6 27.5 2658 FBgn0051072 373.47 12.92333333 19.75 0.073633759 2.12793397 1.392405063 3 3 3 0.2 dme-miR-14-3p 7mer-A1 AGACTGA 3R 26869202 26869208 + 3R_26869202_26869208_+ 0.822620953 0.823208265 0.822914609 0.000415284 His2Av FBtr0334311 26868585 26869220 3R + 26869164 26869223 3'utr His2Av FlyBase G46096.1 CACAACTGTAGCTTTTCATCCGAAAGATAATAATGAATAGACTGACCTGACGTTTTTCAA 20 26869200 0.958613419 6 19 95 0.96875 1.491361694 0.46875 0.4 0.625 20 1 0 31 3R:26869164-26869223 7 His2Av FBtr0334311 26868585 26869220 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 26869170 26869216 3'utr His2Av FlyBase G34775.1 TGTAGCTTTTCATCCGAAAGATAATAATGAATAGACTGACCTGACGT 10 26869201 0.704427486 7 9 51 0.882352941 1.176091259 0.294117647 0.6 0.764705882 10 2 0 15 3R:26869170-26869216 7 12.5 2659 FBgn0001197 5513.57 740.2033333 1128.183333 0.002267134 0.016887252 0.011079759 2 1 1.5 0.2 dme-bantam-3p 7mer-A1 GATCTCA 3R 26872393 26872399 - 3R_26872393_26872399_- 0.77726569 0.823343328 0.800304509 0.032581783 Rb97D FBtr0085093 26872127 26873864 3R - 26872373 26872420 3'utr Rb97D FlyBase G54913.1 TCGTAAGGTAAGTTAGTAACGGATCTCATCTAGGATAAACTAGAGTTT 35 26872391 0.690347602 6 32 251 0.923076923 1.255272505 0.128205128 0.114285714 0.205128205 35 2 1 36 3R:26872373-26872420 7 Rb97D FBtr0085093 26872127 26873864 GATCTCA 7mer-A1 dme-bantam-3p 3R - 26872371 26872420 3'utr Rb97D FlyBase G41456.1 TCGTAAGGTAAGTTAGTAACGGATCTCATCTAGGATAAACTAGAGTTTTT 23 26872391 0.697244343 8 23 161 1 1.531478917 0.117647059 0.47826087 0.647058824 23 0 0 34 3R:26872371-26872420 7 28.5 2660 FBgn0004903 1478.54 66.86666667 102.46 0.019275772 0.426221336 0.27815733 -8 -8 -8 0.2 dme-miR-932-5p 7mer-A1 GAATTGA 3R 26872736 26872742 - 3R_26872736_26872742_- 0.813437923 0.812298719 0.812868321 0.000805536 Rb97D FBtr0100336|FBtr0100334|FBtr0085092|FBtr0085093|FBtr0100335|FBtr0100340|FBtr0100338|FBtr0100337 26872581|26872581|26872581|26872127|26872581|26872581|26872581|26872581 26873961|26873864|26873864|26873864|26873961|26873864|26873864|26873864 3R - 26872717 26872813 3'utr Rb97D FlyBase G54915.1 GGATTAACTAGACTTACGATTTATTCTCGACTCTCTCCTATTATTAAGCTGTTGTGCACGCCAAGGGCTTTGAATTGATCTTTATATATAATGCAGT 25 26872739 0.901085019 9 22 230 0.857142857 1.380211242 0.392857143 0.12 0.214285714 25 4 0 24 3R:26872717-26872813 7 Rb97D FBtr0100337|FBtr0100338|FBtr0100340|FBtr0100335|FBtr0085093|FBtr0085092|FBtr0100334|FBtr0100336 26872581|26872581|26872581|26872581|26872127|26872581|26872581|26872581 26873864|26873864|26873864|26873961|26873864|26873864|26873864|26873961 GAATTGA 7mer-A1 dme-miR-932-5p 3R - 26872712 26872768 3'utr Rb97D FlyBase G41457.1 AAGCTGTTGTGCACGCCAAGGGCTTTGAATTGATCTTTATATATAATGCAGTACTGA 27 26872739 0.767320575 8 23 247 0.789473684 1.176091259 0.263157895 0.259259259 0.473684211 27 7 1 30 3R:26872712-26872768 7 19.5 2661 FBgn0004903 1478.54 66.86666667 102.46 0.013188686 0.291625125 0.190318173 -3 -3 -3 0.2 dme-miR-8-3p 6mer3-8 CAGTAT 3R 26950357 26950362 - 3R_26950357_26950362_- 0.995356195 0.999936015 0.997646105 0.003238408 CG6330 FBtr0085085|FBtr0085084 26950121|26949690 26950424|26950424 3R - 26950270 26950379 3'utr CG6330 FlyBase G54933.1 ATATGTGCGCATCTCTCCAGTATACAATGATGTTTCAACATTCCCTAGTTTAGCTCTGATTAAGTTCCTAGCTTTATTTCTGTGTATATCGCCCACAACCTCATCGGATA 19 26950352 0.78842745 9 17 135 0.961538462 1.397940009 0.153846154 0.315789474 0.5 19 1 0 25 3R:26950270-26950379 6 CG6330 FBtr0085085|FBtr0085084 26950121|26949690 26950424|26950424 CAGTAT 6mer3-8 dme-miR-8-3p 3R - 26950270 26950384 3'utr CG6330 FlyBase G41474.1 ACATTATATGTGCGCATCTCTCCAGTATACAATGATGTTTCAACATTCCCTAGTTTAGCTCTGATTAAGTTCCTAGCTTTATTTCTGTGTATATCGCCCACAACCTCATCGGATA 16 26950364 0.98081386 10 15 109 0.933333333 1.447158031 0.166666667 0.625 0.8 16 2 0 28 3R:26950270-26950384 6 9 2662 FBgn0039464 58.00333333 3.87 5.813333333 0.155163496 2.325581395 1.548165138 -10 2 -4 0.2 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 26961441 26961447 - 3R_26961441_26961447_- 0.685073074 0.631855204 0.658464139 0.037630738 Tsp97E FBtr0344665|FBtr0336726|FBtr0344664|FBtr0273310 26961062|26961399|26961399|26961062 26962355|26962355|26963005|26963005 3R - 26961412 26961473 3'utr Tsp97E FlyBase G54943.1 ATTAGATAATATTCTCTGTATTCTGTGCTGTGATTGAAGTAAATATGATCTTTAAAACAACA 80 26961450 0.8333937 7 78 767 0.979591837 1.982271233 0.091836735 0.175 0.326530612 80 2 0 96 3R:26961412-26961473 7 Tsp97E FBtr0344664|FBtr0273310|FBtr0336726|FBtr0344665 26961399|26961062|26961399|26961062 26963005|26963005|26962355|26962355 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R - 26961416 26961475 3'utr Tsp97E FlyBase G41480.1 CCATTAGATAATATTCTCTGTATTCTGTGCTGTGATTGAAGTAAATATGATCTTTAAAAC 77 26961450 0.704298682 10 75 741 0.982142857 1.740362689 0.125 0.337662338 0.544642857 77 1 1 110 3R:26961416-26961475 7 72.5 2663 FBgn0039465 1547.256667 107.7333333 165.9533333 0.046857126 0.672957921 0.436869803 3 3 3 0.2 dme-bantam-3p 6mer3-8 TGATCT 3R 26961931 26961936 - 3R_26961931_26961936_- 0.843508533 0.999756473 0.921632503 0.11048402 Tsp97E FBtr0344665|FBtr0085082|FBtr0336726|FBtr0344664|FBtr0273310 26961062|26961723|26961399|26961399|26961062 26962355|26962355|26962355|26963005|26963005 3R - 26961891 26961952 3'utr Tsp97E FlyBase G54945.1 AAACATTTCAACAACCTGATCTTACTGTAGAACTAACAACCAGTCAACAATTGTAACTAGCA 25 26961936 0.986643653 4 21 179 0.866666667 0.716003344 0 0.16 0.3 25 0 4 26 3R:26961891-26961952 6 Tsp97E FBtr0344664|FBtr0273310|FBtr0085082|FBtr0336726|FBtr0344665 26961399|26961062|26961723|26961399|26961062 26963005|26963005|26962355|26962355|26962355 TGATCT 6mer3-8 dme-bantam-3p 3R - 26961913 26961957 3'utr Tsp97E FlyBase G41482.1 GAGACAAACATTTCAACAACCTGATCTTACTGTAGAACTAACAAC 20 26961936 0.7814658 5 18 133 0.90625 0.860338007 0.09375 0.4 0.625 20 0 3 29 3R:26961913-26961957 6 22 2664 FBgn0039465 1547.256667 107.7333333 165.9533333 0.014218714 0.204207921 0.132567388 0 0 0 0.2 dme-miR-304-5p 8mer-A1 TGAGATTA 3R 26962097 26962104 - 3R_26962097_26962104_- 0.615128748 0.614579459 0.614854104 0.000388343 Tsp97E FBtr0344665|FBtr0085082|FBtr0336726|FBtr0344664|FBtr0273310 26961062|26961723|26961399|26961399|26961062 26962355|26962355|26962355|26963005|26963005 3R - 26962078 26962130 3'utr Tsp97E FlyBase G54947.1 ATGTTATTTAATTACAAAACCTCCATTGAGATTATGTTTAGATGTAATAATGT 59 26962105 0.932759732 5 57 562 0.985294118 1.826074803 0.029411765 0.13559322 0.25 59 1 0 67 3R:26962078-26962130 8 Tsp97E FBtr0344664|FBtr0273310|FBtr0085082|FBtr0336726|FBtr0344665 26961399|26961062|26961723|26961399|26961062 26963005|26963005|26962355|26962355|26962355 TGAGATTA 8mer-A1 dme-miR-304-5p 3R - 26962014 26962121 3'utr Tsp97E FlyBase G41483.1 AATTACAAAACCTCCATTGAGATTATGTTTAGATGTAATAATGTAATCTAAGTTTAACCGTTTAAAAGTCCTTAGTTAGCTCTTAATGCCTTTCTTTGCAACTCGCAA 45 26962105 0.834999223 12 45 406 1 1.886490725 0.077922078 0.488888889 0.701298701 45 0 0 77 3R:26962014-26962121 8 47.5 2665 FBgn0039465 1547.256667 107.7333333 165.9533333 0.030699496 0.440903465 0.286225043 1 1 1 0.2 dme-miR-965-3p 7mer-m8 TACGCTT 3R 26977159 26977165 + 3R_26977159_26977165_+ 0.615504996 0.619582419 0.617543708 0.002883157 CG5521 FBtr0301134|FBtr0085069 26976544|26976544 26977878|26977878 3R + 26977135 26977180 3'utr CG5521 FlyBase G46133.1 TTTCTTTCCTTTTATGTCACATTTTACGCTTGGCCACAAGACGCAA 32 26977158 0.975931853 2 32 236 1 1.579783597 0.026315789 0.1875 0.315789474 32 0 0 38 3R:26977135-26977180 7 CG5521 FBtr0301134|FBtr0085069 26976544|26976544 26977878|26977878 TACGCTT 7mer-m8 dme-miR-965-3p 3R + 26977146 26977183 3'utr CG5521 FlyBase G34797.1 TTATGTCACATTTTACGCTTGGCCACAAGACGCAAATT 25 26977158 0.975116231 5 25 161 1 1.612783857 0.12195122 0.4 0.634146341 25 0 0 41 3R:26977146-26977183 7 28.5 2666 FBgn0039466 1133.8 17.58666667 26.86 0.025136708 1.620545868 1.061057334 1 1 1 0.2 dme-miR-8-3p 7mer-A1 AGTATTA 3R 26977290 26977296 + 3R_26977290_26977296_+ 0.5892598 0.667524114 0.628391957 0.055341217 CG5521 FBtr0301134|FBtr0085069 26976544|26976544 26977878|26977878 3R + 26977246 26977325 3'utr CG5521 FlyBase G46134.1 CATAGAAACTTGCTCTGCCCATTCAAAGCAAAACATCAACTACTAGTATTATGTAATCGAGCTATATGTATAGGTATAGG 13 26977267 0.970643767 7 13 77 1 1.204119983 0.1875 0.153846154 0.3125 13 0 0 16 3R:26977246-26977325 7 CG5521 FBtr0301134|FBtr0085069 26976544|26976544 26977878|26977878 AGTATTA 7mer-A1 dme-miR-8-3p 3R + 26977241 26977320 3'utr CG5521 FlyBase G34798.1 TCGAACATAGAAACTTGCTCTGCCCATTCAAAGCAAAACATCAACTACTAGTATTATGTAATCGAGCTATATGTATAGGT 11 26977281 0.977281985 7 10 71 0.944444444 1.230448921 0.166666667 0.363636364 0.611111111 11 1 0 17 3R:26977241-26977320 7 5.5 2667 FBgn0039466 1133.8 17.58666667 26.86 0.004850944 0.312736922 0.20476545 23 9 16 0.2 dme-miR-1003-3p 6mer2-7 TGTGAG 3R 26977395 26977400 + 3R_26977395_26977400_+ 1 0.920856257 0.960428128 0.055963047 CG5521 FBtr0301134|FBtr0085069 26976544|26976544 26977878|26977878 3R + 26977353 26977416 3'utr CG5521 FlyBase G46135.1 TCCAAAACCCTATCAACTGTCGATGGCAATCGTCACTAGGAGTGTGAGTCTTAGAAAGGAAAAC 13 26977397 0.938369143 8 12 71 0.923076923 1.079181246 0.230769231 0 0 13 1 0 12 3R:26977353-26977416 6 CG5521 FBtr0301134|FBtr0085069 26976544|26976544 26977878|26977878 TGTGAG 6mer2-7 dme-miR-1003-3p 3R + 26977373 26977408 3'utr CG5521 FlyBase G34799.1 CGATGGCAATCGTCACTAGGAGTGTGAGTCTTAGAA 10 26977397 0.752140934 6 9 55 0.857142857 1.079181246 0.285714286 0.4 0.571428571 10 2 0 12 3R:26977373-26977408 6 7.5 2668 FBgn0039466 1133.8 17.58666667 26.86 0.006614923 0.426459439 0.279225614 -2 -2 -2 0.2 dme-miR-307a-3p 6mer2-7 GTTGTG 3R 26985305 26985310 + 3R_26985305_26985310_+ 0.514453338 0.820499686 0.667476512 0.216407485 CG14253 FBtr0085072|FBtr0085073|FBtr0085071|FBtr0085070|FBtr0085074|FBtr0331701 26985256|26985256|26985256|26985256|26985256|26985256 26985706|26985706|26985706|26985706|26985706|26985706 3R + 26985277 26985326 3'utr CG14253 FlyBase G46142.1 ATCAGCAATCTCAGGTTTATTTTTATACGTTGTGTTAGTGTTTAGTATAT 6 26985311 0.996960673 4 4 55 0.857142857 0.77815125 0.285714286 0.166666667 0.285714286 6 1 0 6 3R:26985277-26985326 6 CG14253 FBtr0085070|FBtr0085071|FBtr0085073|FBtr0085072|FBtr0331701|FBtr0085074 26985256|26985256|26985256|26985256|26985256|26985256 26985706|26985706|26985706|26985706|26985706|26985706 GTTGTG 6mer2-7 dme-miR-307a-3p 3R + 26985279 26985322 3'utr CG14253 FlyBase G34804.1 CAGCAATCTCAGGTTTATTTTTATACGTTGTGTTAGTGTTTAGT 5 26985311 0.989110198 3 4 41 0.9 0.653212514 0.3 0.6 0.8 5 0 1 9 3R:26985279-26985322 6 3.5 2669 FBgn0039467 5123.18 287.6366667 442.6666667 0.000683169 0.012168129 0.007906627 -6 -6 -6 0.2 dme-miR-1007-3p 7mer-m8 TGAGCTT 3R 26985554 26985560 + 3R_26985554_26985560_+ 0.620190305 0.6158705 0.618030403 0.00305456 CG14253 FBtr0085072|FBtr0085073|FBtr0085071|FBtr0085070|FBtr0085074|FBtr0331701 26985256|26985256|26985256|26985256|26985256|26985256 26985706|26985706|26985706|26985706|26985706|26985706 3R + 26985519 26985605 3'utr CG14253 FlyBase G46144.1 TATTGTTGCATACTCTTGGGCTTATAAGTTCAATCTGAGCTTGAAATATGCCTGGTTAGGCCACATTGTCCAGTCGATTCCTTTGAC 17 26985535 0.985374742 10 16 148 0.913043478 1.322219295 0.173913043 0.294117647 0.47826087 17 2 0 21 3R:26985519-26985605 7 CG14253 FBtr0085070|FBtr0085071|FBtr0085073|FBtr0085072|FBtr0331701|FBtr0085074 26985256|26985256|26985256|26985256|26985256|26985256 26985706|26985706|26985706|26985706|26985706|26985706 TGAGCTT 7mer-m8 dme-miR-1007-3p 3R + 26985507 26985586 3'utr CG14253 FlyBase G34806.1 CTACAATACCATTATTGTTGCATACTCTTGGGCTTATAAGTTCAATCTGAGCTTGAAATATGCCTGGTTAGGCCACATTG 16 26985534 0.941184812 9 15 145 0.954545455 1.322219295 0.136363636 0.3125 0.5 16 1 0 21 3R:26985507-26985586 7 5.5 2670 FBgn0039467 5123.18 287.6366667 442.6666667 0.001073552 0.019121345 0.012424699 19 20 19.5 0.2 dme-miR-980-5p 6mer3-8 GAAAAA 3R 27065047 27065052 - 3R_27065047_27065052_- 0.993438144 0.800514616 0.89697638 0.136417515 spz FBtr0114372|FBtr0112834 27064988|27064988 27065853|27065853 3R - 27064990 27065075 3'utr spz FlyBase G54968.1 AAGAAAGATAGAAATAACGATTTGAAAAATGTATGTTAAAAAAAGATAATGTATAATAAATGTATGCAAGTACATGCCAGCAAAGT 20 27065054 0.896865833 13 19 121 0.96 1.380211242 0.08 0.25 0.4 20 1 0 24 3R:27064990-27065075 6 spz FBtr0114372|FBtr0112834 27064988|27064988 27065853|27065853 GAAAAA 6mer3-8 dme-miR-980-5p 3R - 27064992 27065074 3'utr spz FlyBase G41496.1 AGAAAGATAGAAATAACGATTTGAAAAATGTATGTTAAAAAAAGATAATGTATAATAAATGTATGCAAGTACATGCCAGCAAA 13 27065027 0.956480641 8 11 67 0.8125 1.113943352 0 0.230769231 0.375 13 3 0 13 3R:27064992-27065074 6 7 2671 FBgn0003495 2700.523333 165.5533333 254.8866667 0.00259209 0.042282447 0.027463186 2 -25 -11.5 0.2 dme-miR-283-5p 7mer-m8 TGATATT 3R 27065806 27065812 - 3R_27065806_27065812_- 0.577809919 0.57347742 0.575643669 0.00306354 spz FBtr0114372|FBtr0112834 27064988|27064988 27065853|27065853 3R - 27065780 27065931 stop_codon spz FlyBase G54971.1 AGTGATGGCGAACTGGACGTGGTGCAGAATTCCTTCAAGATCCCTTCCTGCTGCAAGTGCGCGTTGAAGACTGGGTGATTCTGGAAAATGGGATTCTCCAGTCGATGGCTGCGACAATGTGATATTGAGGTGAGGCCACGATTTATTCGTAC 643 27065826 0.976300899 25 616 3948 0.950904393 1.662757832 0.288113695 0.161741835 0.303617571 643 23 15 736 3R:27065780-27065931 7 spz FBtr0114372|FBtr0085137|FBtr0085138|FBtr0085145|FBtr0085140|FBtr0085146|FBtr0112834|FBtr0085139 27064988|27065086|27065086|27065086|27065086|27065086|27064988|27065086 27065853|27065853|27065853|27065853|27065853|27065853|27065853|27065853 TGATATT 7mer-m8 dme-miR-283-5p 3R - 27065792 27065883 stop_codon spz FlyBase G41500.1 TGCTGCAAGTGCGCGTTGAAGACTGGGTGATTCTGGAAAATGGGATTCTCCAGTCGATGGCTGCGACAATGTGATATTGAGGTGAGGCCACG 458 27065826 0.851919049 19 428 2742 0.949567723 1.915795428 0.282420749 0.366812227 0.582132565 458 28 7 659 3R:27065792-27065883 7 325 2672 FBgn0003495 2700.523333 165.5533333 254.8866667 0.120347044 1.963113599 1.275076505 14 14 14 0.2 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 27114831 27114836 + 3R_27114831_27114836_+ 0.637319924 0.613528122 0.625424023 0.016823343 CG5815 FBtr0339262|FBtr0085106 27114631|27114631 27115126|27115126 3R + 27114809 27114850 3'utr CG5815 FlyBase G46153.1 GTGCACAGGAAGAAGCGAATTCTGATGAAGATTGGTTTGCTG 7 27114840 0.97487744 4 7 44 1 0.954242509 0.444444444 0.285714286 0.444444444 7 0 0 9 3R:27114809-27114850 6 CG5815 FBtr0339262|FBtr0085106 27114631|27114631 27115126|27115126 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R + 27114798 27114850 3'utr CG5815 FlyBase G34811.1 AAACCAGAGAAGTGCACAGGAAGAAGCGAATTCTGATGAAGATTGGTTTGCTG 7 27114840 0.949350225 4 7 36 1 1.041392685 0.545454545 0.285714286 0.545454545 7 0 0 11 3R:27114798-27114850 6 6.5 2673 FBgn0027574 396.19 21.08 32.38333333 0.01640627 0.308349146 0.200720535 -9 -9 -9 0.2 dme-miR-965-3p 6mer2-7 ACGCTT 3R 27118486 27118491 + 3R_27118486_27118491_+ 0.9007241 0.566114705 0.733419402 0.236604576 CG5880 FBtr0085108 27118289 27118532 3R + 27118453 27118501 3'utr CG5880 FlyBase G46159.1 TTGTTTCCATGACGACTAGGACTAGGCACAATGACGCTTTTATACTACT 58 27118492 0.636881498 6 56 371 0.942857143 1.217483944 0 0.103448276 0.257142857 58 1 3 66 3R:27118453-27118501 6 CG5880 FBtr0085108 27118289 27118532 ACGCTT 6mer2-7 dme-miR-965-3p 3R + 27118453 27118509 3'utr CG5880 FlyBase G34816.1 TTGTTTCCATGACGACTAGGACTAGGCACAATGACGCTTTTATACTACTACTAGCTT 42 27118492 0.758240575 7 40 277 0.956521739 1.819543936 0 0.404761905 0.637681159 42 3 0 66 3R:27118453-27118509 6 48 2674 FBgn0039489 95.00666667 7.643333333 11.70333333 0.505227703 6.279982556 4.101395614 -6 -6 -6 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3R 27125025 27125031 - 3R_27125025_27125031_- 0.521223849 0.521223631 0.52122374 1.41E-07 CG6051 FBtr0305050|FBtr0339264 27124757|27124757 27125642|27125642 3R - 27125004 27125049 3'utr CG6051 FlyBase G55035.1 TTTTTGCGAAACATTTTTTGTGATTTATCGTAATTTTATATGTATT 71 27125025 0.635087439 10 69 829 0.978723404 1.662757832 0.361702128 0.267605634 0.446808511 71 1 1 92 3R:27125004-27125049 7 CG6051 FBtr0339264|FBtr0305050 27124757|27124757 27125642|27125642 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 27124989 27125094 3'utr CG6051 FlyBase G41560.1 ATTGCGCGATCAAGCTGATTTAGTAGGCGTTAACTGTAGCAGAAATTTTTGCGAAACATTTTTTGTGATTTATCGTAATTTTATATGTATTAATTCGCTTATGTTA 47 27125025 0.992890002 11 45 519 0.970588235 1.51851394 0.308823529 0.319148936 0.529411765 47 1 1 66 3R:27124989-27125094 7 55.5 2675 FBgn0039492 806.82 24.12 36.87 0.068788577 2.300995025 1.505288853 -6 -6 -6 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 27156744 27156750 + 3R_27156744_27156750_+ 0.801429485 0.801813481 0.801621483 0.000271529 Men-b FBtr0085110|FBtr0085110|FBtr0085110 27156373|27156373|27156373 27157603|27157603|27157603 3R + 27156721 27156769 3'utr Men-b FlyBase G46176.1 AAAAATTATCATGTTATTAATTTTGTGATACCGAAACGTACGATACTAA 27 27156742 0.8680529 5 24 244 0.909090909 0.875061263 0.181818182 0.148148148 0.303030303 27 0 3 30 3R:27156721-27156769 7 Men-b FBtr0085110|FBtr0085110|FBtr0085110 27156373|27156373|27156373 27157603|27157603|27157603 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 27156709 27156846 3'utr Men-b FlyBase G34826.1 TTTTATATATGTAAAAATTATCATGTTATTAATTTTGTGATACCGAAACGTACGATACTAAATGACGACATTGACATGACGACTGTGACGGTGACTACGCCTTCGAAAAAGCAATTACGCAGTATTCTATTCTATCCT 29 27156742 0.987137413 15 26 228 0.875 0.942008053 0.075 0.310344828 0.5 29 2 3 35 3R:27156709-27156846 7 20.5 2676 FBgn0029155 3172.966667 116.5433333 178.2166667 0.006460831 0.175900237 0.115028523 2 2 2 0.2 dme-miR-980-3p 6mer2-7 GCAGCT 3R 27157450 27157455 + 3R_27157450_27157455_+ 0.981957464 0.989844986 0.985901225 0.005577305 Men-b FBtr0301708|FBtr0085110 27157162|27156373 27157603|27157603 3R + 27157436 27157474 3'utr Men-b FlyBase G46179.1 ATTAACGCAATTAAGCAGCTTTGTTATAATTTATTGTTA 10 27157457 0.619581124 5 9 80 0.933333333 0.84509804 0 0.5 0.666666667 10 0 1 14 3R:27157436-27157474 6 Men-b FBtr0085110|FBtr0301708 27156373|27157162 27157603|27157603 GCAGCT 6mer2-7 dme-miR-980-3p 3R + 27157434 27157478 3'utr Men-b FlyBase G34827.1 TTATTAACGCAATTAAGCAGCTTTGTTATAATTTATTGTTAAAAG 6 27157456 0.976406744 5 5 41 1 0.84509804 0.428571429 0.4 0.571428571 5 0 0 7 3R:27157434-27157478 6 7 2677 FBgn0029155 3172.966667 116.5433333 178.2166667 0.002206137 0.060063496 0.039278032 -7 -6 -6.5 0.2 dme-miR-12-5p 6mer3-8 AATACT 3R 27172369 27172374 - 3R_27172369_27172374_- 0.469463667 0.479411144 0.474437405 0.007033874 Ser FBtr0085128|FBtr0344121 27172088|27172088 27172990|27172990 3R - 27172372 27172427 3'utr Ser FlyBase G55056.1 TGTATATAGTTCTCATTTAGGATCGTCGCGCTCTATATTGTGTATAAGCTGTAAAT 18 27172390 0.715436033 9 17 144 0.958333333 1.361727836 0.25 0.222222222 0.416666667 18 1 0 23 3R:27172372-27172427 2 Ser FBtr0085128|FBtr0344121 27172088|27172088 27172990|27172990 AATACT 6mer3-8 dme-miR-12-5p 3R - 27172320 27172426 3'utr Ser FlyBase G41571.1 GTATATAGTTCTCATTTAGGATCGTCGCGCTCTATATTGTGTATAAGCTGTAAATACTGTAAATTAGCAGTTACCGTTATTGTATTTTGTCTATAGTTAGATTGGTA 46 27172391 0.730521557 15 45 457 0.985915493 1.84509804 0.267605634 0.413043478 0.61971831 46 1 0 70 3R:27172320-27172426 6 4 2678 FBgn0004197 511.3333333 10.63 16.37666667 0.007822686 0.376293509 0.244249949 16 17 16.5 0.2 dme-miR-283-5p 8mer-m1 TGATATTT 3R 27172513 27172520 - 3R_27172513_27172520_- 0.519404412 0.515593888 0.51749915 0.00269443 Ser FBtr0085128|FBtr0344121 27172088|27172088 27172990|27172990 3R - 27172485 27172581 3'utr Ser FlyBase G55057.1 ATTTAAGTTAGATAGTGTAATTCCGAACTCTTCTCTTCGCTAAGCAACATCCTACACAGTGTGATATTTAGTGTAACCCAGGCGCGCATTTACATTC 93 27172514 0.668737143 14 88 691 0.954954955 2.025305865 0.063063063 0.161290323 0.297297297 93 5 0 106 3R:27172485-27172581 8 Ser FBtr0085128|FBtr0344121 27172088|27172088 27172990|27172990 TGATATTT 8mer-m1 dme-miR-283-5p 3R - 27172483 27172612 3'utr Ser FlyBase G41572.1 GCAGTGCCATGTCGATGTGGAAGCCCAAAATATTTAAGTTAGATAGTGTAATTCCGAACTCTTCTCTTCGCTAAGCAACATCCTACACAGTGTGATATTTAGTGTAACCCAGGCGCGCATTTACATTCAT 84 27172514 0.985359712 16 78 630 0.95620438 1.8162413 0.072992701 0.404761905 0.635036496 84 5 1 131 3R:27172483-27172612 8 65.5 2679 FBgn0004197 511.3333333 10.63 16.37666667 0.12809648 6.161806209 3.999592917 -6 -6 -6 0.2 dme-miR-276a-3p 6mer3-8 AGTTCC 3R 27172927 27172932 - 3R_27172927_27172932_- 0.817494243 0.911397242 0.864445742 0.066399448 Ser FBtr0085128|FBtr0344121 27172088|27172088 27172990|27172990 3R - 27172840 27172957 3'utr Ser FlyBase G55061.1 AACCAGCCGCCCACAGCCAGCTCAAAGTTCCAATTGCCACAGCACGGGCGCTATTTCCAAGTGCATTAGTAGCGTAATTAAAACTAGGATATTGTTAAGGATACCAAGGTAGGCCACA 38 27172923 0.958965659 13 37 180 0.976190476 1.311753861 0.023809524 0.105263158 0.19047619 38 0 1 41 3R:27172840-27172957 6 Ser FBtr0085128|FBtr0344121 27172088|27172088 27172990|27172990 AGTTCC 6mer3-8 dme-miR-276a-3p 3R - 27172870 27172950 3'utr Ser FlyBase G41574.1 CGCCCACAGCCAGCTCAAAGTTCCAATTGCCACAGCACGGGCGCTATTTCCAAGTGCATTAGTAGCGTAATTAAAACTAGG 20 27172924 0.951459693 6 17 83 0.888888889 1.380211242 0 0.35 0.518518519 20 3 0 24 3R:27172870-27172950 6 18.5 2680 FBgn0004197 511.3333333 10.63 16.37666667 0.036179922 1.740357479 1.129656015 -9 -8 -8.5 0.2 dme-miR-970-3p 7mer-A1 CTTATGA 3R 27227490 27227496 - 3R_27227490_27227496_- 0.815723599 0.67064152 0.74318256 0.102588537 CG42813 FBtr0303825|FBtr0347068 27227438|27227068 27227706|27227706 3R - 27227450 27227577 3'utr CG42813 FlyBase G55075.1 ATGCTTTCCAACCGAGCGCATTGTGAGTGCGCCTAGCGCACACGATATAATACTGAAATTCCCGTGCCTGTCGAGGCTTACCTTATGATATGTATACCGTGTAATATGTAATAAACCCTGGCCAGCTG 18 27227499 0.977203213 9 18 120 1 1.301029996 0.05 0.111111111 0.2 18 0 0 20 3R:27227450-27227577 7 CG42813 FBtr0347068|FBtr0303825 27227068|27227438 27227706|27227706 CTTATGA 7mer-A1 dme-miR-970-3p 3R - 27227489 27227516 3'utr CG42813 FlyBase G41582.1 CCGTGCCTGTCGAGGCTTACCTTATGAT 6 27227499 0.656531759 3 5 41 0.888888889 0.903089987 0.111111111 0.5 0.666666667 6 1 0 8 3R:27227489-27227516 7 7 2681 FBgn0261995 209.3266667 26.48666667 40.32666667 0.033440555 0.264283916 0.17358241 3 3 3 0.2 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 27242373 27242378 - 3R_27242373_27242378_- 0.995662672 0.999128392 0.997395532 0.00245062 CG18766 FBtr0333327|FBtr0085122|FBtr0085123 27242333|27242333|27242333 27242709|27242709|27242709 3R - 27242365 27242489 3'utr CG18766 FlyBase G55085.1 CGATCGCGCCCTCGATACAGAGTTGACTTCCGTAAAGAGGGGGCTGGATCGATCAATCGTGCATAGAGATCCTAGGGAGTACATTACATTTAGACACCATTTCCTACTGTTAGCTGTAAACTATT 64 27242389 0.828264264 17 58 498 0.935897436 1.562292864 0.141025641 0.1875 0.333333333 64 4 1 73 3R:27242365-27242489 6 CG18766 FBtr0085123|FBtr0085122|FBtr0333327 27242333|27242333|27242333 27242709|27242709|27242709 AGCTGT 6mer3-8 dme-miR-1008-3p 3R - 27242359 27242452 3'utr CG18766 FlyBase G41586.1 AGGGGGCTGGATCGATCAATCGTGCATAGAGATCCTAGGGAGTACATTACATTTAGACACCATTTCCTACTGTTAGCTGTAAACTATTATGCAT 40 27242389 0.862003502 10 38 310 0.98 1.69019608 0.22 0.2 0.36 40 1 0 49 3R:27242359-27242452 6 36 2682 FBgn0042111 927.4033333 71.10333333 109.1233333 0.038818062 0.506305377 0.329901946 11 11 11 0.2 dme-miR-8-3p 7mer-m8 CAGTATT 3R 27242531 27242537 - 3R_27242531_27242537_- 0.661613526 0.661611642 0.661612584 1.34E-06 CG18766 FBtr0333327|FBtr0085122|FBtr0085123 27242333|27242333|27242333 27242709|27242709|27242709 3R - 27242490 27242549 3'utr CG18766 FlyBase G55085.2 ACACACGGCATACAGTATTTTTTGTATAGTTAAAATATACATTGGAGTTTTAGTTCTCGA 58 27242539 0.907122899 11 53 523 0.925373134 1.315270435 0 0.155172414 0.268656716 58 3 2 62 3R:27242490-27242549 7 CG18766 FBtr0085123|FBtr0085122|FBtr0333327 27242333|27242333|27242333 27242709|27242709|27242709 CAGTATT 7mer-m8 dme-miR-8-3p 3R - 27242476 27242548 3'utr CG18766 FlyBase G41587.1 CACACGGCATACAGTATTTTTTGTATAGTTAAAATATACATTGGAGTTTTAGTTCTCGACGATCGCGCCCTCG 27 27242529 0.990119859 7 25 250 0.925 1.568201724 0.05 0.333333333 0.55 27 3 0 37 3R:27242476-27242548 7 36 2683 FBgn0042111 927.4033333 71.10333333 109.1233333 0.038818062 0.506305377 0.329901946 2 -8 -3 0.2 dme-miR-970-3p 6mer3-8 TCTTAT 3R 27256336 27256341 + 3R_27256336_27256341_+ 0.990338585 0.991157371 0.990747978 0.000578979 TfIIA-L FBtr0085156|FBtr0085155|FBtr0085154 27256140|27256140|27256140 27256463|27256463|27256463 3R + 27256314 27256423 3'utr TfIIA-L FlyBase G46196.1 ACGTACTCGGGCCGACACTGTATCTTATTTTAGTTCCATCTGTTTTGTATTACGATAGCTTAAGGGTGTGTTGCAACCAACCATCTCGATTAAATGTATTAGAGTGCCGC 19 27256336 0.982208629 10 18 141 1 1.322219295 0.238095238 0.105263158 0.19047619 19 0 0 21 3R:27256314-27256423 6 TfIIA-L FBtr0085154|FBtr0085155|FBtr0085156 27256140|27256140|27256140 27256463|27256463|27256463 TCTTAT 6mer3-8 dme-miR-970-3p 3R + 27256310 27256346 3'utr TfIIA-L FlyBase G34842.1 AGCAACGTACTCGGGCCGACACTGTATCTTATTTTAG 9 27256333 0.783779911 6 9 56 1 1.255272505 0.166666667 0.333333333 0.666666667 9 0 0 18 3R:27256310-27256346 6 8.5 2684 FBgn0011289 653.3333333 54.7 83.7 0.013010204 0.155393053 0.101553166 0 3 1.5 0.2 dme-miR-1012-3p 8mer-A1 TTGACTAA 3R 27257031 27257038 - 3R_27257031_27257038_- 0.626318465 0.621619257 0.623968861 0.003322836 woc FBtr0085178|FBtr0334730|FBtr0112857|FBtr0334731 27256593|27256593|27256593|27256593 27257305|27257305|27257305|27257305 3R - 27256966 27257130 5'utr-coding woc FlyBase G55098.1 ACGCATATTTCGATTGTCTCTAGTTGCGATAACGCTGATGGAGGTGACCTTGTATAAAATGTGAACGCCAACCAAGCACATCTCACTTTCGATTGACTAAACTTAATCTAGGAATCAAAAAAATCCAAGCAGCAATATACACAACTAAACTTAACACCCACTCAC 44 27257038 0.898756544 18 41 267 0.957446809 1.352182518 0.234042553 0.068181818 0.127659574 44 1 1 45 3R:27256966-27257130 8 woc FBtr0112857|FBtr0334731|FBtr0085178|FBtr0334730 27256593|27256593|27256593|27256593 27257305|27257305|27257305|27257305 TTGACTAA 8mer-A1 dme-miR-1012-3p 3R - 27256964 27257130 5'utr-coding woc FlyBase G41595.1 ACGCATATTTCGATTGTCTCTAGTTGCGATAACGCTGATGGAGGTGACCTTGTATAAAATGTGAACGCCAACCAAGCACATCTCACTTTCGATTGACTAAACTTAATCTAGGAATCAAAAAAATCCAAGCAGCAATATACACAACTAAACTTAACACCCACTCACAT 31 27257038 0.977449356 15 31 200 1 1.672097858 0.085106383 0.419354839 0.617021277 31 0 0 47 3R:27256964-27257130 8 14 2685 FBgn0010328 3628.043333 70.90333333 108.5766667 0.003858829 0.19745193 0.128941148 0 0 0 0.2 dme-miR-14-3p 6mer3-8 AAGACT 3R 27277424 27277429 - 3R_27277424_27277429_- 0.999958968 0.996331602 0.998145285 0.002564959 mrt FBtr0305972|FBtr0085174|FBtr0305971|FBtr0305974|FBtr0305975|FBtr0305973 27277247|27277247|27277247|27277247|27277247|27277247 27277589|27277589|27277589|27277589|27277589|27277589 3R - 27277394 27277467 3'utr mrt FlyBase G55151.1 ATATATATATTCCTAGAGCCAGACCCGCGCATTGTTAAAAGACTTGATTATATTTAAGCATTAATACATAAATG 90 27277421 0.960337608 13 80 707 0.897196262 1.505149978 0.242990654 0.155555556 0.289719626 90 9 2 96 3R:27277394-27277467 6 mrt FBtr0305975|FBtr0305973|FBtr0305971|FBtr0305974|FBtr0305972|FBtr0085174 27277247|27277247|27277247|27277247|27277247|27277247 27277589|27277589|27277589|27277589|27277589|27277589 AAGACT 6mer3-8 dme-miR-14-3p 3R - 27277383 27277469 3'utr mrt FlyBase G41635.1 ATATATATATATTCCTAGAGCCAGACCCGCGCATTGTTAAAAGACTTGATTATATTTAAGCATTAATACATAAATGAAACCTAAAGT 67 27277421 0.989928223 11 58 572 0.901098901 1.311753861 0.428571429 0.208955224 0.417582418 67 6 3 82 3R:27277383-27277469 6 66 2686 FBgn0039507 449.7733333 19.81666667 30.52666667 0.14674058 3.330529857 2.162044114 -8 -8 -8 0.2 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 27548254 27548261 - 3R_27548254_27548261_- 0.385556228 0.378025617 0.381790922 0.005324938 Klp98A FBtr0085211|FBtr0304671 27547773|27547773 27548733|27548733 3R - 27548235 27548309 3'utr Klp98A FlyBase G55172.1 TATACGCATAGGTGTACGACTTCCAAAAAGTTATTCCAGTTATTTAGTCTGTGATTGCCAACTGAAGTTATAGAT 51 27548254 0.852845016 12 49 468 0.967741935 1.77815125 0.064516129 0.117647059 0.274193548 51 2 0 60 3R:27548235-27548309 8 Klp98A FBtr0085211|FBtr0304671 27547773|27547773 27548733|27548733 CTGTGATT 8mer-m1 dme-miR-308-3p 3R - 27548234 27548278 3'utr Klp98A FlyBase G41649.1 TATTCCAGTTATTTAGTCTGTGATTGCCAACTGAAGTTATAGATC 32 27548254 0.81003435 5 28 296 0.894736842 1.707570176 0.01754386 0.5 0.719298246 32 6 0 51 3R:27548234-27548278 8 38 2687 FBgn0004387 717.51 15.74333333 24.23 0.052960934 2.413720093 1.568303756 -7 -7 -7 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 27562765 27562770 - 3R_27562765_27562770_- 0.997535046 0.995129978 0.996332512 0.001700592 wdb FBtr0085205|FBtr0085205|FBtr0085205|FBtr0085204|FBtr0085204|FBtr0085204|FBtr0085208|FBtr0085208|FBtr0085208 27561673|27561673|27561673|27561673|27561673|27561673|27561673|27561673|27561673 27565568|27565568|27565568|27565568|27565568|27565568|27565568|27565568|27565568 3R - 27562728 27562780 3'utr wdb FlyBase G55187.1 TCGTTTGTTTTGTGATCAACACCTTTGTTGCACTCTGAGTTAATCTGTTTAGT 9 27562771 0.990109938 6 9 96 1 1.079181246 0.666666667 0.222222222 0.416666667 9 0 0 12 3R:27562728-27562780 6 wdb FBtr0085208|FBtr0085208|FBtr0085208|FBtr0085204|FBtr0085204|FBtr0085204|FBtr0085205|FBtr0085205|FBtr0085205 27561673|27561673|27561673|27561673|27561673|27561673|27561673|27561673|27561673 27565568|27565568|27565568|27565568|27565568|27565568|27565568|27565568|27565568 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 27562754 27562807 3'utr wdb FlyBase G41661.1 AATGATTATTGCCTCTTCATCATCATTTCGTTTGTTTTGTGATCAACACCTTTG 12 27562771 0.994136184 4 9 124 0.888888889 0.726998728 0.277777778 0.333333333 0.555555556 12 0 2 16 3R:27562754-27562807 6 8.5 2688 FBgn0027492 2914.523333 83.19 128.17 0.002916429 0.102175742 0.066318171 1 1 1 0.2 dme-miR-2535b-3p 7mer-m1 CGTGAGT 3R 27563627 27563633 - 3R_27563627_27563633_- 0.716269622 0.618902401 0.667586012 0.068849007 wdb FBtr0085205|FBtr0085204|FBtr0085208 27561673|27561673|27561673 27565568|27565568|27565568 3R - 27563618 27563653 3'utr wdb FlyBase G55189.1 TGATAATTGTGTCTGTGAATCGTGAGTTATTATACA 12 27563627 0.791279343 4 11 108 0.928571429 1.113943352 0.357142857 0.166666667 0.285714286 12 1 0 13 3R:27563618-27563653 7 wdb FBtr0085208|FBtr0085204|FBtr0085205 27561673|27561673|27561673 27565568|27565568|27565568 CGTGAGT 7mer-m1 dme-miR-2535b-3p 3R - 27563614 27563655 3'utr wdb FlyBase G41663.1 AATGATAATTGTGTCTGTGAATCGTGAGTTATTATACACATA 15 27563645 0.700494477 6 15 136 1 1.322219295 0.238095238 0.266666667 0.476190476 15 0 0 21 3R:27563614-27563655 7 13 2689 FBgn0027492 2914.523333 83.19 128.17 0.004460421 0.156268782 0.101427791 -6 12 3 0.2 dme-bantam-3p 6mer3-8 TGATCT 3R 27564381 27564386 - 3R_27564381_27564386_- 0.99170949 0.785135072 0.888422281 0.146070159 wdb FBtr0085205|FBtr0085204|FBtr0085208 27561673|27561673|27561673 27565568|27565568|27565568 3R - 27564341 27564395 3'utr wdb FlyBase G55193.1 GATAAACGCTGATCTATATAAATGTATGTAAAGTGTAAAGCGGCGGATACACAAA 8 27564378 0.97757128 6 8 55 1 1 0.5 0.25 0.4 8 0 0 10 3R:27564341-27564395 6 wdb FBtr0085208|FBtr0085204|FBtr0085205 27561673|27561673|27561673 27565568|27565568|27565568 TGATCT 6mer3-8 dme-bantam-3p 3R - 27564373 27564405 3'utr wdb FlyBase G41664.1 TATAACGTACGATAAACGCTGATCTATATAAAT 7 27564379 0.741171191 4 7 43 1 1.041392685 0 0.285714286 0.545454545 7 0 0 11 3R:27564373-27564405 6 7 2690 FBgn0027492 2914.523333 83.19 128.17 0.002401765 0.084144729 0.054614965 -8 -7 -7.5 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 27585541 27585546 + 3R_27585541_27585546_+ 0.974651996 0.986625059 0.980638527 0.00846626 pins FBtr0085189 27585321 27586376 3R + 27585479 27585565 3'utr pins FlyBase G46255.1 AAGATTTATATATACACACGTACACGAAAAGCATTAATTTATGAATAGCAACTAACCACGTAACCAAATATTAGGGGTGTATAGGGC 8 27585549 0.942401673 6 8 37 1 0.903089987 0.5 0 0 8 0 0 8 3R:27585479-27585565 6 pins FBtr0085189 27585321 27586376 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 27585525 27585568 3'utr pins FlyBase G34896.1 AGCAACTAACCACGTAACCAAATATTAGGGGTGTATAGGGCCTC 5 27585549 0.971052433 3 4 24 0.857142857 0.77815125 0.142857143 0.4 0.571428571 5 1 0 6 3R:27585525-27585568 6 4 2691 FBgn0040080 1104.993333 40.80333333 62.47 0.003619931 0.098031207 0.064030735 -8 -8 -8 0.2 dme-miR-7-5p 6mer3-8 GTCTTC 3R 27585774 27585779 + 3R_27585774_27585779_+ 0.999269341 0.891792642 0.945530991 0.075997503 pins FBtr0085189 27585321 27586376 3R + 27585701 27585786 3'utr pins FlyBase G46257.1 AATTGCATGTGCAAGTAGTTTAAGCCGGATAATACTAATGTACTAATCCAATTTGCTCAATAGACGGAACCAAGTCTTCTCTACGA 11 27585754 0.965539612 9 11 60 1 1.146128036 0.214285714 0.272727273 0.428571429 11 0 0 14 3R:27585701-27585786 6 pins FBtr0085189 27585321 27586376 GTCTTC 6mer3-8 dme-miR-7-5p 3R + 27585738 27585778 3'utr pins FlyBase G34898.1 ATGTACTAATCCAATTTGCTCAATAGACGGAACCAAGTCTT 5 27585753 0.977323709 4 4 25 0.8 0.602059991 0 0 0 5 1 0 4 3R:27585738-27585778 5 3 2692 FBgn0040080 1104.993333 40.80333333 62.47 0.002714949 0.073523405 0.048023051 20 21 20.5 0.2 dme-miR-980-3p 6mer3-8 GGCAGC 3R 27598074 27598079 - 3R_27598074_27598079_- 0.991654514 0.992079123 0.991866819 0.000300238 dsd FBtr0335247|FBtr0301390 27597561|27597759 27599034|27599034 3R - 27598058 27598103 3'utr dsd FlyBase G55223.1 AAACTAATCGTAAGGTTTCCTCTTGGCAGCAGCAAACAAACAAAAA 40 27598080 0.966817754 2 40 216 1 1.698970004 0.06 0.2 0.36 40 0 0 50 3R:27598058-27598103 6 dsd FBtr0335247|FBtr0301390 27597561|27597759 27599034|27599034 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 27598059 27598104 3'utr dsd FlyBase G41686.1 CAAACTAATCGTAAGGTTTCCTCTTGGCAGCAGCAAACAAACAAAA 28 27598080 0.970932985 2 28 162 1 1.556302501 0.222222222 0.285714286 0.444444444 28 0 0 36 3R:27598059-27598104 6 34 2693 FBgn0039528 2636.286667 54.87666667 84.28333333 0.012896928 0.61957116 0.403401226 1 1 1 0.2 dme-bantam-3p 6mer3-8 TGATCT 3R 27598484 27598489 - 3R_27598484_27598489_- 0.500671027 0.577907829 0.539289428 0.054614665 dsd FBtr0335247|FBtr0301390 27597561|27597759 27599034|27599034 3R - 27598439 27598507 3'utr dsd FlyBase G55225.1 AAACAAAAGACATTCAATTGATCTTAGCAAAAAAAAAAGTGATGAACCAAACCAGAGGACAGGCAGACA 20 27598489 0.970494347 4 20 110 1 1.462397998 0 0.35 0.551724138 20 0 0 29 3R:27598439-27598507 6 dsd FBtr0335247|FBtr0301390 27597561|27597759 27599034|27599034 TGATCT 6mer3-8 dme-bantam-3p 3R - 27598443 27598506 3'utr dsd FlyBase G41688.2 AACAAAAGACATTCAATTGATCTTAGCAAAAAAAAAAGTGATGAACCAAACCAGAGGACAGGCA 22 27598489 0.974488327 5 21 116 0.96969697 1.505149978 0.090909091 0.409090909 0.606060606 22 1 0 32 3R:27598443-27598506 6 18.5 2694 FBgn0039528 2636.286667 54.87666667 84.28333333 0.007017446 0.337119602 0.219497726 0 0 0 0.2 dme-miR-1003-3p 6mer2-7 TGTGAG 3R 27598556 27598561 - 3R_27598556_27598561_- 0.794285902 0.69619077 0.745238336 0.06936371 dsd FBtr0335247|FBtr0301390 27597561|27597759 27599034|27599034 3R - 27598509 27598575 3'utr dsd FlyBase G55226.1 ATTTATGCAAATTTTGTGAGCTGCCCCGGCAGCAGTTGCACCATATGCCGCGACAGAAACAGAGTTA 35 27598562 0.976797909 6 33 211 0.928571429 1.290034611 0.238095238 0.2 0.333333333 35 2 1 39 3R:27598509-27598575 6 dsd FBtr0335247|FBtr0301390 27597561|27597759 27599034|27599034 TGTGAG 6mer2-7 dme-miR-1003-3p 3R - 27598538 27598572 3'utr dsd FlyBase G41689.1 TATGCAAATTTTGTGAGCTGCCCCGGCAGCAGTTG 15 27598562 0.580762985 4 12 94 0.826086957 0.801632346 0.086956522 0.533333333 0.695652174 15 2 2 19 3R:27598538-27598572 6 24 2695 FBgn0039528 2636.286667 54.87666667 84.28333333 0.009103714 0.437344348 0.284753807 1 1 1 0.2 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 27639105 27639112 + 3R_27639105_27639112_+ 0.631071477 0.63111336 0.631092418 2.96E-05 Mtl FBtr0085192|FBtr0085193 27638699|27638699 27639871|27639871 3R + 27639078 27639156 3'utr Mtl FlyBase G46263.1 AAATCTAATGCACTACATATGTAGAAATCTAGTCAATTGAATCGAATGTATTGTACGAATAGTATCTGGCAGAAAGAGA 45 27639105 0.984277687 10 42 334 0.928571429 1.113943352 0.517857143 0.155555556 0.321428571 45 1 3 52 3R:27639078-27639156 8 Mtl FBtr0085193|FBtr0085192 27638699|27638699 27639871|27639871 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 27639078 27639153 3'utr Mtl FlyBase G34904.1 AAATCTAATGCACTACATATGTAGAAATCTAGTCAATTGAATCGAATGTATTGTACGAATAGTATCTGGCAGAAAG 48 27639114 0.985072996 10 42 334 0.902777778 1.511883361 0.430555556 0.416666667 0.611111111 48 6 1 65 3R:27639078-27639153 8 44 2696 FBgn0039532 1160.21 67.97 104.5233333 0.037924169 0.647344417 0.420958638 0 -9 -4.5 0.2 dme-miR-283-5p 7mer-m8 TGATATT 3R 27639341 27639347 + 3R_27639341_27639347_+ 0.616683335 0.593139077 0.604911206 0.016648263 Mtl FBtr0085192|FBtr0085193 27638699|27638699 27639871|27639871 3R + 27639306 27639361 3'utr Mtl FlyBase G46265.1 ACTTGACGACGAGCTCTTAGAGAAGCCACTTTTTATGATATTCAAGCATGCGCATT 7 27639341 0.986785929 3 7 56 1 0.84509804 0 0 0 7 0 0 7 3R:27639306-27639361 7 Mtl FBtr0085193|FBtr0085192 27638699|27638699 27639871|27639871 TGATATT 7mer-m8 dme-miR-283-5p 3R + 27639287 27639352 3'utr Mtl FlyBase G34906.1 TCTGAAACCAGGCCAATTCACTTGACGACGAGCTCTTAGAGAAGCCACTTTTTATGATATTCAAGC 7 27639322 0.977519334 3 6 40 0.928571429 1.113943352 0.357142857 0.714285714 0.857142857 7 1 0 13 3R:27639287-27639352 7 4 2697 FBgn0039532 1160.21 67.97 104.5233333 0.003447652 0.058849492 0.038268967 0 19 9.5 0.2 dme-miR-2535b-3p 6mer3-8 CCGTGA 3R 27639809 27639814 + 3R_27639809_27639814_+ 0.658959932 0.787630613 0.723295272 0.090983925 Mtl FBtr0085192|FBtr0085193 27638699|27638699 27639871|27639871 3R + 27639753 27639831 3'utr Mtl FlyBase G46267.1 AAGTCTTATGTAAATGAAATGTAAACGAAGGCCGTTTGGCTCCAGCGATGTAGTAGCCGTGAAACAGATTTAATACTTA 11 27639806 0.957128157 6 11 56 1 1.113943352 0.153846154 0.181818182 0.307692308 11 0 0 13 3R:27639753-27639831 6 Mtl FBtr0085193|FBtr0085192 27638699|27638699 27639871|27639871 CCGTGA 6mer3-8 dme-miR-2535b-3p 3R + 27639789 27639816 3'utr Mtl FlyBase G34908.1 TGGCTCCAGCGATGTAGTAGCCGTGAAA 5 27639806 0.770466242 2 5 19 1 0.903089987 0.375 0.6 0.75 5 0 0 8 3R:27639789-27639816 6 6 2698 FBgn0039532 1160.21 67.97 104.5233333 0.005171478 0.088274239 0.057403451 3 3 3 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 27696484 27696491 + 3R_27696484_27696491_+ 0.649310876 0.649006836 0.649158856 0.000215031 CG43320 FBtr0306924|FBtr0306924|FBtr0306924 27696450|27696450|27696450 27696531|27696531|27696531 3R + 27696460 27696503 3'utr CG43320 FlyBase G46282.1 ACGTGTCTAGGGTAAGAACGTTTACTGTGATACGTGATAATAAT 61 27696481 0.756387817 6 60 503 0.985294118 1.826074803 0.455882353 0.114754098 0.205882353 61 1 0 67 3R:27696460-27696503 8 CG43320 FBtr0306924|FBtr0306924|FBtr0306924 27696450|27696450|27696450 27696531|27696531|27696531 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 27696459 27696500 3'utr CG43320 FlyBase G34922.1 CACGTGTCTAGGGTAAGAACGTTTACTGTGATACGTGATAAT 39 27696481 0.761456478 4 38 315 0.98245614 1.748188027 0.596491228 0.333333333 0.543859649 39 1 0 56 3R:27696459-27696500 8 50 2699 FBgn0263025 42.64 4.076666667 6.266666667 1.17260788 12.26492232 7.978723404 3 3 3 0.2 dme-miR-307a-3p 7mer-A1 GTTGTGA 3R 27933007 27933013 - 3R_27933007_27933013_- 0.819222954 0.823349512 0.821286233 0.002917876 Mes-4 FBtr0085267|FBtr0335014 27932980|27932980 27933182|27933182 3R - 27933001 27933038 3'utr Mes-4 FlyBase G55292.1 TGGAGATTGTGCTGAACAGATGGATGTTGTGAAAATAA 6 27933014 0.71400301 4 5 33 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3R:27933001-27933038 7 Mes-4 FBtr0335014|FBtr0085267 27932980|27932980 27933182|27933182 GTTGTGA 7mer-A1 dme-miR-307a-3p 3R - 27932989 27933035 3'utr Mes-4 FlyBase G41727.1 AGATTGTGCTGAACAGATGGATGTTGTGAAAATAAAGTGAGACGATT 12 27933017 0.861487842 7 10 64 0.875 0.84509804 0.375 0.25 0.4375 12 1 1 14 3R:27932989-27933035 7 6.5 2700 FBgn0039559 1839.39 48.38 74.15333333 0.00353378 0.134353038 0.087656208 1 4 2.5 0.2 dme-bantam-3p 7mer-m8 TGATCTC 3R 27942649 27942655 + 3R_27942649_27942655_+ 0.653063382 0.658437448 0.655750415 0.003799992 CG5514 FBtr0301143 27942441 27942778 3R + 27942554 27942675 intron-3'utr CG5514 FlyBase G46349.1 TGCGTGTGACTAAAGTGCTTGTTTTTATCAGCAGACGCCCTGTCCGCCAGGCGACTCAGCAAGAAGCTCTGCCAGCAGCAGCGGTACACCAACGATGATCTCTACAAGCCCCGTCCAATCCT 155 27942649 0.945020675 10 151 617 0.97740113 1.937016107 0.192090395 0.103225806 0.214689266 155 3 1 173 3R:27942554-27942675 7 CG5514 FBtr0085252|FBtr0301143 27942441|27942441 27942778|27942778 TGATCTC 7mer-m8 dme-bantam-3p 3R + 27942622 27942724 stop_codon CG5514 FlyBase G34979.1 CTGCCAGCAGCAGCGGTACACCAACGATGATCTCTACAAGCCCCGTCCAATCCTGTCGCAGCGCTCTCGTCGCCGGGGCCTGGACTCCATTCTCTAGCCAACG 80 27942649 0.939774268 11 78 318 0.9609375 2.089905111 0.25 0.425 0.640625 80 5 0 123 3R:27942622-27942724 7 109 2701 FBgn0039560 308.5966667 10.24 15.73 0.353211851 10.64453125 6.929434202 0 0 0 0.2 dme-bantam-3p 6mer3-8 TGATCT 3R 28319903 28319908 - 3R_28319903_28319908_- 0.553258531 0.563780391 0.558519461 0.007440107 larp FBtr0306389|FBtr0306390|FBtr0306388|FBtr0301181|FBtr0301180|FBtr0089682|FBtr0089680 28318160|28318160|28318160|28318160|28318160|28318160|28318160 28320581|28320581|28320581|28320581|28320581|28320581|28320581 3R - 28319879 28319992 3'utr larp FlyBase G55332.1 CGATATAACCTATGCAAATATTACCTAACGAAAACTGAAAACCAATCAATCGAAATTGATACGCAAGCAACAACAAAAACCAAATGATCTTAATGCAAATAAATTTTGTAAATT 1150 28319908 0.979048701 16 1138 4999 0.9886121 2.239612259 0.019217082 0.175652174 0.325266904 1150 9 7 1389 3R:28319879-28319992 6 larp FBtr0301181|FBtr0301180|FBtr0089682|FBtr0089680|FBtr0306389|FBtr0306390|FBtr0306388 28318160|28318160|28318160|28318160|28318160|28318160|28318160 28320581|28320581|28320581|28320581|28320581|28320581|28320581 TGATCT 6mer3-8 dme-bantam-3p 3R - 28319880 28319953 3'utr larp FlyBase G41762.1 AACCAATCAATCGAAATTGATACGCAAGCAACAACAAAAACCAAATGATCTTAATGCAAATAAATTTTGTAAAT 815 28319908 0.977454823 10 801 3509 0.984100418 2.769377326 0.011715481 0.319018405 0.535564854 815 18 1 1176 3R:28319880-28319953 6 967 2702 FBgn0261618 9245.076667 138.0666667 210.28 0.104596212 7.003862868 4.598630398 0 0 0 0.2 dme-miR-986-5p 7mer-m8 ATTCGAG 3R 28320445 28320451 - 3R_28320445_28320451_- 0.449638685 0.433292261 0.441465473 0.01155865 larp FBtr0306389|FBtr0306390|FBtr0306388|FBtr0301181|FBtr0301180|FBtr0089682|FBtr0089680 28318160|28318160|28318160|28318160|28318160|28318160|28318160 28320581|28320581|28320581|28320581|28320581|28320581|28320581 3R - 28320405 28320648 stop_codon larp FlyBase G55334.2 AGCAACATCAACAGCAGCGACGCCAGCGGTAACGGTATCTTCGGGGTCATCGTCGTCGAAGAAGTAGTTACACGATAATGCAGAGACACTTTTTGGATTAGGCTTAAGTTAATATCTACCGCTTAGTTTTCAGGGGGCACTCGCATTTGATGGCTCCACACTCTTTTGTTTATTCATTCTTATTATTCTTTTGTAGTATTCGAGTCAAACGTAAAGTGGGAAGAGTTGTTAGCGTTTAGCATAA 283 28320450 0.935001739 39 273 1947 0.974504249 1.837588438 0.141643059 0.183745583 0.345609065 283 5 4 344 3R:28320405-28320648 7 larp FBtr0301181|FBtr0301180|FBtr0089682|FBtr0089680|FBtr0306389|FBtr0306390|FBtr0306388 28318160|28318160|28318160|28318160|28318160|28318160|28318160 28320581|28320581|28320581|28320581|28320581|28320581|28320581 ATTCGAG 7mer-m8 dme-miR-986-5p 3R - 28320390 28320481 3'utr larp FlyBase G41764.1 GTTTATTCATTCTTATTATTCTTTTGTAGTATTCGAGTCAAACGTAAAGTGGGAAGAGTTGTTAGCGTTTAGCATAATTAAGTGAAATTTTT 152 28320450 0.933300818 12 148 1019 0.960869565 2.344392274 0.07826087 0.361842105 0.57826087 152 9 0 221 3R:28320390-28320481 7 160.5 2703 FBgn0261618 9245.076667 138.0666667 210.28 0.017360592 1.162481893 0.763268024 -1 -1 -1 0.2 dme-miR-276a-3p 7mer-A1 GTTCCTA 3R 28520850 28520856 - 3R_28520850_28520856_- 0.495751933 0.541726696 0.518739314 0.032509093 Ppn FBtr0301837|FBtr0300337|FBtr0301839|FBtr0301838 28520663|28520663|28520663|28520663 28521128|28521128|28521128|28521128 3R - 28520835 28520912 3'utr Ppn FlyBase G55383.1 AGTATTTTACTCTCTTCCAGGACAAAAGCAAATAGTATTAGTGATTTTATGTTTGTGTTCCTATTTATTCTTGATAAC 13 28520859 0.91937244 10 12 151 0.9375 1.176091259 0.3125 0.230769231 0.375 13 1 0 15 3R:28520835-28520912 7 Ppn FBtr0301839|FBtr0301838|FBtr0301837|FBtr0300337 28520663|28520663|28520663|28520663 28521128|28521128|28521128|28521128 GTTCCTA 7mer-A1 dme-miR-276a-3p 3R - 28520823 28520889 3'utr Ppn FlyBase G41808.1 AAAAGCAAATAGTATTAGTGATTTTATGTTTGTGTTCCTATTTATTCTTGATAACGAGTAACCTTAA 9 28520859 0.990984146 7 8 83 0.909090909 1 0.090909091 0.111111111 0.272727273 9 1 0 10 3R:28520823-28520889 7 6 2704 FBgn0003137 888.9833333 12.49 19.08666667 0.006749283 0.480384307 0.314355571 3 3 3 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 28609248 28609254 - 3R_28609248_28609254_- 0.801101849 0.801757898 0.801429873 0.000463933 CG10011 FBtr0085319|FBtr0085319|FBtr0085319 28607937|28607937|28607937 28609394|28609394|28609394 3R - 28609241 28609283 3'utr CG10011 FlyBase G55402.1 TTAGTACTTTTCAGAAAGTATTTGTTTTTTGTGATAGTTTCAA 13 28609255 0.707454133 3 11 173 0.947368421 1.255272505 0.210526316 0.307692308 0.526315789 13 1 0 18 3R:28609241-28609283 7 CG10011 FBtr0085319|FBtr0085319|FBtr0085319 28607937|28607937|28607937 28609394|28609394|28609394 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 28609241 28609270 3'utr CG10011 FlyBase G41818.1 GAAAGTATTTGTTTTTTGTGATAGTTTCAA 5 28609255 0.666793151 3 5 64 1 0.84509804 0.571428571 0.4 0.571428571 5 0 0 7 3R:28609241-28609270 7 8.5 2705 FBgn0039590 962.0733333 13.5 20.90333333 0.008835085 0.62962963 0.406633711 1 1 1 0.2 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 28695565 28695572 + 3R_28695565_28695572_+ 0.385560617 0.385557839 0.385559228 1.98E-06 CG9990 FBtr0085309|FBtr0305087|FBtr0336787|FBtr0303343|FBtr0305088|FBtr0085308 28695157|28695157|28695157|28695157|28695157|28695157 28695939|28695939|28695939|28695939|28695939|28695939 3R + 28695543 28695578 3'utr CG9990 FlyBase G46413.1 AATTTTATATATTTTCAATGGACTGTGATTGTTTTT 15 28695561 0.736746895 5 14 159 0.95 1.278753601 0.05 0.266666667 0.45 15 1 0 19 3R:28695543-28695578 8 CG9990 FBtr0305088|FBtr0085308|FBtr0336787|FBtr0303343|FBtr0085309|FBtr0305087 28695157|28695157|28695157|28695157|28695157|28695157 28695939|28695939|28695939|28695939|28695939|28695939 CTGTGATT 8mer-m1 dme-miR-308-3p 3R + 28695548 28695583 3'utr CG9990 FlyBase G35026.1 TATATATTTTCAATGGACTGTGATTGTTTTTTCTAC 13 28695560 0.745503027 6 13 126 1 1.230448921 0.352941176 0.230769231 0.411764706 13 0 0 17 3R:28695548-28695583 8 14 2706 FBgn0039594 1 0.036666667 0.056666667 14 381.8181818 247.0588235 4 5 4.5 0.2 dme-bantam-3p 7mer-m8 TGATCTC 3R 28816496 28816502 + 3R_28816496_28816502_+ 0.639235396 0.632305178 0.635770287 0.004900391 CG1646 FBtr0113301 28814209 28817354 3R + 28816478 28816524 3'utr CG1646 FlyBase G46438.1 CCTCAATAAAATCTGTCATGATCTCGACGCCGGCTTGGCCGCCCTGC 71 28816496 0.711954305 7 63 410 0.880952381 1.86923172 0.392857143 0.169014085 0.297619048 71 10 0 74 3R:28816478-28816524 7 CG1646 FBtr0113301 28814209 28817354 TGATCTC 7mer-m8 dme-bantam-3p 3R + 28816472 28816551 3'utr CG1646 FlyBase G35043.1 CCGTTTCCTCAATAAAATCTGTCATGATCTCGACGCCGGCTTGGCCGCCCTGCAGCAGGCGCTGGAACGTGATCCAGCCA 46 28816496 0.987401779 9 45 254 0.985294118 1.826074803 0.323529412 0.282608696 0.514705882 46 1 0 67 3R:28816472-28816551 7 55 2707 FBgn0039600 1138.88 36.74333333 56.61666667 0.04829306 1.496870181 0.971445393 0 0 0 0.2 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3R 28816868 28816873 + 3R_28816868_28816873_+ 0.998205489 0.979535739 0.988870614 0.013201542 CG1646 FBtr0113301 28814209 28817354 3R + 28816855 28816892 3'utr CG1646 FlyBase G46439.1 AGTGATGGCAGTCCTAGTCGCAAAAACTCATCAAGCAG 6 28816865 0.923141336 4 6 18 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3R:28816855-28816892 6 CG1646 FBtr0113301 28814209 28817354 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3R + 28816855 28816884 3'utr CG1646 FlyBase G35044.1 AGTGATGGCAGTCCTAGTCGCAAAAACTCA 6 28816867 0.912319201 3 6 23 1 0.903089987 0 0.333333333 0.5 6 0 0 8 3R:28816855-28816884 6 5.5 2708 FBgn0039600 1138.88 36.74333333 56.61666667 0.004829306 0.149687018 0.097144539 3 1 2 0.2 dme-miR-33-5p 7mer-A1 AATGCAA 3R 28824625 28824631 - 3R_28824625_28824631_- 0.78043931 0.773566869 0.777003089 0.004859521 WASp FBtr0085354|FBtr0085352|FBtr0085353|FBtr0336768 28824504|28824504|28824504|28824504 28825449|28825449|28825449|28825449 3R - 28824606 28824665 3'utr WASp FlyBase G55426.1 CGCATAAGTATTTTCTTTTAGTTCGAGCGCATTTAATGCAAACTTGTAGTCATTTTTCTT 17 28824633 0.819089351 5 15 150 0.944444444 1.230448921 0.166666667 0.058823529 0.111111111 17 1 0 17 3R:28824606-28824665 7 WASp FBtr0085354|FBtr0085352|FBtr0085353|FBtr0336768 28824504|28824504|28824504|28824504 28825449|28825449|28825449|28825449 AATGCAA 7mer-A1 dme-miR-33-5p 3R - 28824593 28824650 3'utr WASp FlyBase G41841.1 TTTTAGTTCGAGCGCATTTAATGCAAACTTGTAGTCATTTTTCTTCTGTGTGTTTGTA 14 28824633 0.982650081 4 13 104 0.952380952 1.301029996 0.285714286 0.285714286 0.523809524 14 1 0 20 3R:28824593-28824650 7 13.5 2709 FBgn0024273 698.2566667 30.35666667 46.61666667 0.019333865 0.444712858 0.289595996 2 2 2 0.2 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3R 28869775 28869780 + 3R_28869775_28869780_+ 0.506425927 0.816136594 0.66128126 0.218998536 spg FBtr0330304|FBtr0336766 28869617|28869062 28870439|28870439 3R + 28869755 28869838 3'utr spg FlyBase G46479.1 ATTTTTACTCAAATTATTTTTGGTGCCAAATTTTTGCTGCAAGTCCAAAGCGCAATATAAACAAATGTTGTAATGATATAGGTT 15 28869775 0.976788254 8 15 132 1 1.204119983 0.125 0.066666667 0.125 15 0 0 16 3R:28869755-28869838 6 spg FBtr0336766|FBtr0330304 28869062|28869617 28870439|28870439 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3R + 28869765 28869793 3'utr spg FlyBase G35070.1 AAATTATTTTTGGTGCCAAATTTTTGCTG 10 28869774 0.71298109 2 10 95 1 1.204119983 0.3125 0.5 0.6875 10 0 0 16 3R:28869765-28869793 6 9.5 2710 FBgn0264324 552.3333333 8.306666667 12.79 0.017199759 1.143659711 0.742767787 0 1 0.5 0.2 dme-miR-33-5p 7mer-m8 CAATGCA 3R 28870069 28870075 + 3R_28870069_28870075_+ 0.63635752 0.580328973 0.608343247 0.039618132 spg FBtr0330304|FBtr0336766 28869617|28869062 28870439|28870439 3R + 28869996 28870099 3'utr spg FlyBase G46481.1 TCAGAACGCTAATCAAAAACGATCAACGCAAAATATATACACTGAAAACAAAGCAGGACACCGACAAAATGTGCAATGCAGTTTTTACTTTAACGAATATAGCC 22 28870067 0.950259749 7 19 90 0.875 1.021189299 0.125 0.090909091 0.166666667 22 2 1 21 3R:28869996-28870099 7 spg FBtr0336766|FBtr0330304 28869062|28869617 28870439|28870439 CAATGCA 7mer-m8 dme-miR-33-5p 3R + 28870046 28870081 3'utr spg FlyBase G35072.1 AAGCAGGACACCGACAAAATGTGCAATGCAGTTTTT 9 28870066 0.906629325 4 8 26 0.846153846 1.041392685 0.538461538 0.333333333 0.538461538 9 2 0 11 3R:28870046-28870081 7 11.5 2711 FBgn0264324 552.3333333 8.306666667 12.79 0.02082076 1.384430177 0.899139953 2 3 2.5 0.2 dme-miR-79-3p 6mer3-8 TAGCTT 3R 28870177 28870182 + 3R_28870177_28870182_+ 0.707809812 0.712234034 0.710021923 0.003128382 spg FBtr0330304|FBtr0336766 28869617|28869062 28870439|28870439 3R + 28870143 28870194 3'utr spg FlyBase G46482.1 ATGCGAACGGCAATTAGGAATTTTAAAGTGCTACTAGCTTCATAACGAATCA 16 28870164 0.975066441 9 15 111 0.952380952 1 0.095238095 0.25 0.428571429 16 0 1 20 3R:28870143-28870194 6 spg FBtr0336766|FBtr0330304 28869062|28869617 28870439|28870439 TAGCTT 6mer3-8 dme-miR-79-3p 3R + 28870156 28870190 3'utr spg FlyBase G35073.1 TTAGGAATTTTAAAGTGCTACTAGCTTCATAACGA 5 28870165 0.767774407 4 4 39 0.857142857 0.77815125 0.142857143 0.4 0.571428571 5 1 0 6 3R:28870156-28870190 6 9 2712 FBgn0264324 552.3333333 8.306666667 12.79 0.016294508 1.083467095 0.703674746 13 12 12.5 0.2 dme-miR-31a-5p 6mer3-8 TCTTGC 3R 28921833 28921838 + 3R_28921833_28921838_+ 0.661336564 0.60217471 0.631755637 0.041833781 Doa FBtr0299742|FBtr0299749|FBtr0299748|FBtr0308600|FBtr0308599|FBtr0336461|FBtr0299747|FBtr0299744|FBtr0299753|FBtr0299743|FBtr0299752|FBtr0299751|FBtr0299745|FBtr0308598|FBtr0299750 28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741 28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28921965|28922772|28921965|28922772|28921965 3R + 28921794 28921840 3'utr Doa FlyBase G46524.1 CTCATGCAAACATACACTCAAGGCAGTCGTCCAGCAACGTCTTGCAC 8 28921834 0.935135252 3 7 29 0.888888889 0.903089987 0 0.125 0.222222222 8 1 0 8 3R:28921794-28921840 6 Doa FBtr0308598|FBtr0299751|FBtr0299750|FBtr0299752|FBtr0299745|FBtr0299749|FBtr0299747|FBtr0308599|FBtr0299753|FBtr0299744|FBtr0299742|FBtr0299748|FBtr0299743|FBtr0308600|FBtr0336461 28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741|28921741 28922772|28922772|28921965|28921965|28921965|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772|28922772 TCTTGC 6mer3-8 dme-miR-31a-5p 3R + 28921809 28921858 3'utr Doa FlyBase G35107.1 ACTCAAGGCAGTCGTCCAGCAACGTCTTGCACCCGACTCGTAGAGTAGAC 5 28921835 0.938897014 4 4 17 1 0.954242509 0 0.6 0.777777778 5 0 0 9 3R:28921809-28921858 6 4.5 2713 FBgn0265998 2384.633333 84.60666667 129.7833333 0.001887083 0.053187298 0.034673173 -1 -2 -1.5 0.2 dme-miR-318-3p 7mer-m8 CCCAGTG 3R 29046697 29046703 + 3R_29046697_29046703_+ 0.555183575 0.53625526 0.545719418 0.013384329 Pkc98E FBtr0085359|FBtr0339149|FBtr0339150|FBtr0301516 29046223|29046223|29046223|29046223 29049148|29047034|29047034|29047034 3R + 29046657 29046718 3'utr Pkc98E FlyBase G46554.1 AAGAAAGAAGGAAGAGATACCCCCACCCATCTAGTCAATGCCCAGTGGCTGAGTGCATTTTG 85 29046686 0.958026863 8 78 359 0.928571429 1.959041392 0.224489796 0.141176471 0.255102041 85 7 0 91 3R:29046657-29046718 7 Pkc98E FBtr0339150|FBtr0301516|FBtr0085359|FBtr0339149 29046223|29046223|29046223|29046223 29047034|29047034|29049148|29047034 CCCAGTG 7mer-m8 dme-miR-318-3p 3R + 29046660 29046729 3'utr Pkc98E FlyBase G35122.1 AAAGAAGGAAGAGATACCCCCACCCATCTAGTCAATGCCCAGTGGCTGAGTGCATTTTGTTATTAGTTAT 61 29046686 0.929056765 9 55 287 0.925531915 1.638489257 0.329787234 0.393442623 0.606382979 61 6 1 87 3R:29046660-29046729 7 58 2714 FBgn0003093 985.62 22.17 34.02333333 0.058846208 2.616147948 1.704712452 11 11 11 0.2 dme-miR-8-3p 7mer-A1 AGTATTA 3R 29046965 29046971 + 3R_29046965_29046971_+ 0.805141686 0.82334792 0.814244803 0.012873727 Pkc98E FBtr0085359|FBtr0339149|FBtr0339150|FBtr0301516 29046223|29046223|29046223|29046223 29049148|29047034|29047034|29047034 3R + 29046945 29046992 3'utr Pkc98E FlyBase G46555.1 CTTGCACAACTTCCTTCTCAAGTATTAAAGCGATATTATTTTAAAGTT 12 29046961 0.908393151 7 8 103 0.769230769 0.698970004 0.307692308 0.083333333 0.153846154 12 2 1 10 3R:29046945-29046992 7 Pkc98E FBtr0339150|FBtr0301516|FBtr0085359|FBtr0339149 29046223|29046223|29046223|29046223 29047034|29047034|29049148|29047034 AGTATTA 7mer-A1 dme-miR-8-3p 3R + 29046894 29047002 3'utr Pkc98E FlyBase G35123.1 AATACATGCGACCACACGGATCTAGTTTCATTTGTTTTACATATTCGAAATCTTGCACAACTTCCTTCTCAAGTATTAAAGCGATATTATTTTAAAGTTACCTTATTGT 15 29046961 0.992828398 11 13 141 0.826086957 1.278753601 0.086956522 0.4 0.608695652 15 4 0 19 3R:29046894-29047002 7 8 2715 FBgn0003093 985.62 22.17 34.02333333 0.008116718 0.360847993 0.235132752 4 4 4 0.2 dme-miR-305-5p 7mer-m1 GTACAAT 3R 29050677 29050683 + 3R_29050677_29050683_+ 0.765586097 0.765586653 0.765586375 4.24E-07 CG11837 FBtr0085360 29050645 29050721 3R + 29050662 29050693 3'utr CG11837 FlyBase G46562.1 AGATCGTTAAACTTTGTACAATTTACCAACAT 8 29050675 0.626237893 4 8 70 1 0.903089987 0 0 0 8 0 0 8 3R:29050662-29050693 7 CG11837 FBtr0085360 29050645 29050721 GTACAAT 7mer-m1 dme-miR-305-5p 3R + 29050657 29050694 3'utr CG11837 FlyBase G35126.1 TCTATAGATCGTTAAACTTTGTACAATTTACCAACATT 9 29050683 0.596077959 4 9 72 1 1.113943352 0 0.333333333 0.538461538 9 0 0 13 3R:29050657-29050694 7 8 2716 FBgn0039627 323 36.6 56.57333333 0.024767802 0.218579235 0.14140938 2 -6 -2 0.2 dme-bantam-3p 6mer3-8 TGATCT 3R 29058766 29058771 + 3R_29058766_29058771_+ 0.985535267 0.981483896 0.983509581 0.002864772 Sirt7 FBtr0085364 29058678 29059204 3R + 29058723 29058791 3'utr Sirt7 FlyBase G46565.1 GGTGAAATGATTACCCTTGAGTCAATGGCTTTTTGGAAACGTTTGATCTTATACTTGATATGAAGGAGC 22 29058774 0.854690217 10 22 177 1 1.431363764 0.296296296 0.181818182 0.333333333 22 0 0 27 3R:29058723-29058791 6 Sirt7 FBtr0085364 29058678 29059204 TGATCT 6mer3-8 dme-bantam-3p 3R + 29058690 29058779 3'utr Sirt7 FlyBase G35128.1 ATGTACGGCCGTGATTCCTCCCTAAGATAAGAAGGTGAAATGATTACCCTTGAGTCAATGGCTTTTTGGAAACGTTTGATCTTATACTTG 23 29058765 0.987055649 12 21 181 0.90625 1.462397998 0.125 0.347826087 0.53125 23 3 0 29 3R:29058690-29058779 6 14 2717 FBgn0039631 118 4.676666667 7.163333333 0.118644068 2.993585175 1.954397394 -8 1 -3.5 0.2 dme-miR-980-3p 6mer3-8 GGCAGC 3R 29059718 29059723 - 3R_29059718_29059723_- 0.998060215 0.999489873 0.998775044 0.001010951 Cul5 FBtr0085417 29059270 29059952 3R - 29059680 29059744 3'utr Cul5 FlyBase G55498.1 TAAAAGACCCACACTCCAATCGGCAGCCATTTTCTCGTGTCCACGTCCTGTATTTGTGAAACTTT 43 29059725 0.931828011 7 42 222 0.980769231 1.707570176 0.096153846 0.186046512 0.326923077 43 1 0 51 3R:29059680-29059744 6 Cul5 FBtr0085417 29059270 29059952 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 29059710 29059744 3'utr Cul5 FlyBase G41879.2 TAAAAGACCCACACTCCAATCGGCAGCCATTTTCT 15 29059725 0.966945703 3 13 62 0.952380952 1.301029996 0.047619048 0.266666667 0.476190476 15 1 0 20 3R:29059710-29059744 6 27 2718 FBgn0039632 438.4633333 15.78333333 23.95 0.061578695 1.710665259 1.127348643 2 2 2 0.2 dme-bantam-3p 6mer3-8 TGATCT 3R 29108426 29108431 + 3R_29108426_29108431_+ 0.501597339 0.981827811 0.741712575 0.339574243 CG11873 FBtr0330299|FBtr0330301|FBtr0330300 29106782|29106701|29106701 29108948|29108948|29108948 3R + 29108410 29108443 3'utr CG11873 FlyBase G46588.1 TCCCGTGTGAGTTGCATGATCTTGTATTTCTATT 12 29108426 0.831970843 2 11 108 1 1.146128036 0 0.181818182 0.357142857 11 0 0 14 3R:29108410-29108443 6 CG11873 FBtr0330300|FBtr0330301|FBtr0330299 29106701|29106701|29106782 29108948|29108948|29108948 TGATCT 6mer3-8 dme-bantam-3p 3R + 29108395 29108437 3'utr CG11873 FlyBase G35142.1 CCCACCTGCCTAGCGTCCCGTGTGAGTTGCATGATCTTGTATT 9 29108426 0.98706224 3 9 71 1 1.176091259 0.066666667 0.444444444 0.666666667 9 0 0 15 3R:29108395-29108437 6 9.5 2719 FBgn0039633 879.82 9.466666667 14.51 0.010797663 1.003521127 0.654720882 0 0 0 0.2 dme-miR-184-5p 6mer3-8 TGATAA 3R 29109378 29109383 - 3R_29109378_29109383_- 0.99755685 0.989240107 0.993398478 0.005880795 alpha-Man-Ib FBtr0085416 29109051 29109880 3R - 29109362 29109407 3'utr alpha-Man-Ib FlyBase G55513.1 TCGATTGTATAATATTCTGTGTACTGATAATTGTTATTTTGTAATT 24 29109390 0.643471361 6 23 257 1 1.397940009 0.08 0.041666667 0.08 24 0 0 25 3R:29109362-29109407 6 alpha-Man-Ib FBtr0085416 29109051 29109880 TGATAA 6mer3-8 dme-miR-184-5p 3R - 29109367 29109399 3'utr alpha-Man-Ib FlyBase G41889.1 ATAATATTCTGTGTACTGATAATTGTTATTTTG 13 29109387 0.695193212 6 11 155 0.863636364 1.278753601 0 0.461538462 0.681818182 13 3 0 19 3R:29109367-29109399 6 18 2720 FBgn0039634 927.67 35.07666667 53.86333333 0.019403452 0.513161646 0.334179095 7 4 5.5 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 29145582 29145589 + 3R_29145582_29145589_+ 0.606174567 0.615573081 0.610873824 0.006645743 CG14516 FBtr0085383|FBtr0085382|FBtr0335406 29145497|29145497|29145497 29145787|29145787|29145787 3R + 29145540 29145594 3'utr CG14516 FlyBase G46650.1 TATTAGATTTCGCAGCTGCAACTGCATGGGTTGGGCCACCAATGCATTTATGTGT 14 29145582 0.76462622 7 13 99 0.941176471 0.903089987 0.352941176 0.214285714 0.352941176 14 0 1 16 3R:29145540-29145594 8 CG14516 FBtr0335406|FBtr0085382|FBtr0085383 29145497|29145497|29145497 29145787|29145787|29145787 TGCATTTA 8mer-A1 dme-miR-277-3p 3R + 29145567 29145601 3'utr CG14516 FlyBase G35187.1 GGGTTGGGCCACCAATGCATTTATGTGTAATATTT 6 29145587 0.736312023 4 6 42 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3R:29145567-29145601 8 8.5 2721 FBgn0039640 168.03 5.77 8.72 0.050586205 1.473136915 0.974770642 0 -5 -2.5 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 29145737 29145744 + 3R_29145737_29145744_+ 0.500120315 0.498737192 0.499428754 0.000977999 CG14516 FBtr0085383|FBtr0085382|FBtr0335406 29145497|29145497|29145497 29145787|29145787|29145787 3R + 29145634 29145791 3'utr CG14516 FlyBase G46651.2 AAGAGAGAAAGCCCTTGGCAGATCGTCCAGAGCATCACGTTTTTCATTACTTTTAATGTATGCCTTCTTTTCATAACAATTATGAGTCTTGTAATTTTAATTTGTACTTAAATGTAATTGTAAATGTAAATGGAATTATAACATTGTTCGTCACAAAA 53 29145716 0.990092391 22 51 496 0.967213115 1.770852012 0.245901639 0.132075472 0.245901639 53 2 0 59 3R:29145634-29145791 8 CG14516 FBtr0335406|FBtr0085382|FBtr0085383 29145497|29145497|29145497 29145787|29145787|29145787 GTACTTAA 8mer-A1 dme-miR-252-5p 3R + 29145704 29145760 3'utr CG14516 FlyBase G35188.1 TCATAACAATTATGAGTCTTGTAATTTTAATTTGTACTTAAATGTAATTGTAAATGT 11 29145716 0.790802347 5 10 117 0.928571429 1.113943352 0.142857143 0.272727273 0.428571429 11 1 0 13 3R:29145704-29145760 8 13.5 2722 FBgn0039640 168.03 5.77 8.72 0.080342796 2.339688042 1.548165138 21 21 21 0.2 dme-miR-965-3p 7mer-m8 TACGCTT 3R 29149797 29149803 + 3R_29149797_29149803_+ 0.620171852 0.620200181 0.620186017 2.00E-05 Pglym78 FBtr0100483|FBtr0100482|FBtr0085384 29149734|29149734|29149734 29149901|29149901|29149901 3R + 29149739 29149869 3'utr Pglym78 FlyBase G46655.1 CGCAGGCCACACCTCATGAGAATCCACTCAAATACGGCACAAGTCAGAGCATTCTGATTACGCTTCTGTTCAAGATGTAGCCAATCCCATTCGTTGTTGTTGTTCGCGTAGCAGTAATTGGTTCATCCCCA 70 29149796 0.986152669 14 68 579 0.987951807 1.913813852 0.409638554 0.157142857 0.289156627 70 1 0 82 3R:29149739-29149869 7 Pglym78 FBtr0085384|FBtr0100482|FBtr0100483 29149734|29149734|29149734 29149901|29149901|29149901 TACGCTT 7mer-m8 dme-miR-965-3p 3R + 29149742 29149846 3'utr Pglym78 FlyBase G35189.1 AGGCCACACCTCATGAGAATCCACTCAAATACGGCACAAGTCAGAGCATTCTGATTACGCTTCTGTTCAAGATGTAGCCAATCCCATTCGTTGTTGTTGTTCGCG 33 29149797 0.986685174 8 31 258 0.963636364 1.247154615 0.309090909 0.40625 0.654545455 32 0 2 53 3R:29149742-29149846 7 41 2723 FBgn0014869 753.3333333 91.53 139.47 0.054424779 0.447940566 0.293970029 1 0 0.5 0.2 dme-miR-8-3p 7mer-A1 AGTATTA 3R 29164609 29164615 + 3R_29164609_29164615_+ 0.823283509 0.821091471 0.82218749 0.001549978 CG11897 FBtr0085386|FBtr0085387 29164548|29164548 29164966|29164966 3R + 29164563 29164625 3'utr CG11897 FlyBase G46685.1 TCATCTACTTGTAGATTTGCTTAAGGTTTAGATCATAAGAACTGAAAGTATTATGTACATAGC 24 29164598 0.979632951 6 22 159 0.90625 1.161368002 0.0625 0.291666667 0.46875 24 2 1 29 3R:29164563-29164625 7 CG11897 FBtr0085387|FBtr0085386 29164548|29164548 29164966|29164966 AGTATTA 7mer-A1 dme-miR-8-3p 3R + 29164562 29164624 3'utr CG11897 FlyBase G35211.1 CTCATCTACTTGTAGATTTGCTTAAGGTTTAGATCATAAGAACTGAAAGTATTATGTACATAG 23 29164598 0.979230709 7 22 154 0.967741935 1.176091259 0.419354839 0.347826087 0.516129032 23 0 1 30 3R:29164562-29164624 7 20.5 2724 FBgn0039644 385.6666667 9.473333333 14.69333333 0.05315471 2.163969036 1.395190563 11 11 11 0.2 dme-miR-252-5p 7mer-m8 GTACTTA 3R 29164664 29164670 + 3R_29164664_29164670_+ 0.588172869 0.567555901 0.577864385 0.014578421 CG11897 FBtr0085386|FBtr0085387 29164548|29164548 29164966|29164966 3R + 29164643 29164687 3'utr CG11897 FlyBase G46686.1 TAACGAAATACCTATTGCCTTGTACTTACGGAATATTTGTAAGCT 18 29164662 0.690893157 5 17 133 1 1.301029996 0.15 0.111111111 0.2 18 0 0 20 3R:29164643-29164687 7 CG11897 FBtr0085387|FBtr0085386 29164548|29164548 29164966|29164966 GTACTTA 7mer-m8 dme-miR-252-5p 3R + 29164641 29164676 3'utr CG11897 FlyBase G35212.1 GCTAACGAAATACCTATTGCCTTGTACTTACGGAAT 14 29164658 0.697929763 3 10 92 0.818181818 0.77815125 0.045454545 0.428571429 0.636363636 14 2 2 18 3R:29164641-29164676 7 13.5 2725 FBgn0039644 385.6666667 9.473333333 14.69333333 0.035004322 1.42505278 0.918784029 2 6 4 0.2 dme-miR-304-5p 7mer-m8 TGAGATT 3R 29221864 29221870 + 3R_29221864_29221870_+ 0.618624843 0.618767903 0.618696373 0.000101187 Ef1gamma FBtr0085393|FBtr0085392|FBtr0302442 29221775|29221775|29221775 29222109|29222109|29222109 3R + 29221745 29222006 stop_codon Ef1gamma FlyBase G46701.1 GCAAGTTCAACCAGGGCAAGATCTTCAAGTAATCATCTCTGCCTAGCCCAGCTCCGCTCAAAGCAGCAGCCGCCCTCATTTAGACCAACAACAACAACAGCAGCAGTAACAATAAAGTTTGAGATTTAAAATGCAGGAAGAGCACAATGCCCATTTCTTAAGTTCCAACTGATAAGTACACTAAAGATATCCAATATCTGTCGTGCTGCCTCCCACGTTTGGCGGAATCGTGTGTCTCGCCTCCTGCATTTTGTACTGGAGA 65 29221863 0.975518867 26 57 360 0.871794872 1.054357662 0.205128205 0.169230769 0.307692308 65 5 5 68 3R:29221745-29222006 7 Ef1gamma FBtr0302442|FBtr0085392|FBtr0085393 29221775|29221775|29221775 29222109|29222109|29222109 TGAGATT 7mer-m8 dme-miR-304-5p 3R + 29221752 29221924 stop_codon Ef1gamma FlyBase G35225.1 CAACCAGGGCAAGATCTTCAAGTAATCATCTCTGCCTAGCCCAGCTCCGCTCAAAGCAGCAGCCGCCCTCATTTAGACCAACAACAACAACAGCAGCAGTAACAATAAAGTTTGAGATTTAAAATGCAGGAAGAGCACAATGCCCATTTCTTAAGTTCCAACTGATAAGTACA 32 29221863 0.97091587 13 29 168 0.954545455 1.62324929 0.295454545 0.375 0.545454545 32 2 0 42 3R:29221752-29221924 7 17 2726 FBgn0029176 8118.963333 592.2866667 901.75 0.002093863 0.028702318 0.018852232 1 1 1 0.2 dme-miR-283-5p 8mer-A1 TGATATTA 3R 29235069 29235076 + 3R_29235069_29235076_+ 0.585747607 0.569265403 0.577506505 0.011654675 CG15817 FBtr0300833|FBtr0333818|FBtr0300832 29233962|29233962|29233962 29235162|29235302|29235162 3R + 29235037 29235120 3'utr CG15817 FlyBase G46717.1 AGTTCTATTTTTTTCCAAGAGCGCTGCTATAGTGATATTAACATTTACAGAGCAAAGATTTGTGTACATTGTAATTTGTAAAGT 101 29235065 0.71315795 10 96 729 0.935483871 1.763427994 0.088709677 0.178217822 0.330645161 101 7 1 116 3R:29235037-29235120 8 CG15817 FBtr0300832|FBtr0333818|FBtr0300833 29233962|29233962|29233962 29235162|29235302|29235162 TGATATTA 8mer-A1 dme-miR-283-5p 3R + 29235037 29235128 3'utr CG15817 FlyBase G35239.1 AGTTCTATTTTTTTCCAAGAGCGCTGCTATAGTGATATTAACATTTACAGAGCAAAGATTTGTGTACATTGTAATTTGTAAAGTTTACATAT 62 29235097 0.961602065 12 62 458 1 1.986771734 0.12371134 0.338709677 0.577319588 62 0 0 97 3R:29235037-29235128 8 54 2727 FBgn0028476 401.67 10.06 15.48 0.134438718 5.367793241 3.488372093 4 -28 -12 0.2 dme-miR-317-3p 6mer2-7 GTGTTC 3R 29315599 29315604 - 3R_29315599_29315604_- 0.945690793 0.917924858 0.931807825 0.019633456 Cnx99A FBtr0085438|FBtr0334873|FBtr0085437 29315252|29315252|29315252 29315834|29315834|29315834 3R - 29315572 29315669 3'utr Cnx99A FlyBase G55596.1 ACACACTCGTTTCGGTTTAGTCAACTCTGTACGTACTTTTGCCGTATTATCGTTGCATTTCTGTCGTGTTCGACCCTCTGTCGTCCCCATATCTCCTA 17 29315590 0.672654886 12 14 148 0.842105263 0.726998728 0.052631579 0.117647059 0.210526316 17 1 2 16 3R:29315572-29315669 6 Cnx99A FBtr0085437|FBtr0085438|FBtr0334873 29315252|29315252|29315252 29315834|29315834|29315834 GTGTTC 6mer2-7 dme-miR-317-3p 3R - 29315576 29315671 3'utr Cnx99A FlyBase G41952.1 ACACACACTCGTTTCGGTTTAGTCAACTCTGTACGTACTTTTGCCGTATTATCGTTGCATTTCTGTCGTGTTCGACCCTCTGTCGTCCCCATATCT 11 29315590 0.986944929 9 10 95 0.947368421 1.255272505 0.105263158 0.545454545 0.736842105 11 1 0 18 3R:29315576-29315671 6 6.5 2728 FBgn0015622 4351.313333 201.68 309.1566667 0.001493802 0.032229274 0.021024939 -14 -14 -14 0.2 dme-miR-184-3p 7mer-m8 TCCGTCC 3R 29485121 29485127 + 3R_29485121_29485127_+ 0.661431311 0.661515374 0.661473342 5.95E-05 Ptp99A FBtr0303148|FBtr0303454|FBtr0085422|FBtr0085424 29484488|29484488|29484488|29484488 29486704|29487131|29486704|29486704 3R + 29485107 29485145 5'utr Ptp99A FlyBase G46727.1 TCGAATCGATTCAGTCCGTCCTAGTATCTGTTATTCTTT 10 29485116 0.688481828 5 10 82 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 3R:29485107-29485145 7 Ptp99A FBtr0085422|FBtr0085424|FBtr0303148|FBtr0303454 29484488|29484488|29484488|29484488 29486704|29486704|29486704|29487131 TCCGTCC 7mer-m8 dme-miR-184-3p 3R + 29485106 29485142 5'utr Ptp99A FlyBase G35249.1 TTCGAATCGATTCAGTCCGTCCTAGTATCTGTTATTC 9 29485117 0.718774042 5 8 62 0.916666667 0.740362689 0.333333333 0.333333333 0.5 9 0 1 11 3R:29485106-29485142 7 9.5 2729 FBgn0004369 285.67 6.166666667 9.486666667 0.033255155 1.540540541 1.001405481 5 4 4.5 0.2 dme-miR-79-3p 7mer-m8 TAGCTTT 3R 29485312 29485318 - 3R_29485312_29485318_- 0.27123656 0.45568985 0.363463205 0.130428179 CG2321 FBtr0334339 29484781 29487140 3R - 29485260 29485364 3'utr CG2321 FlyBase G55610.1 TTTTCGTGATGCTCTTGTGCTTTGTGCGGAAATCGTGTGATTTACTTAGCTTTGATTGGGATTTACAGTGATGTGTGTGGTGTGGGTGGTGTAGAGTGCTCGGTA 10 29485320 0.988811525 8 9 94 0.9 0.653212514 0.3 0 0 10 0 1 9 3R:29485260-29485364 7 CG2321 FBtr0334339 29484781 29487140 TAGCTTT 7mer-m8 dme-miR-79-3p 3R - 29485262 29485355 3'utr CG2321 FlyBase G41959.1 TGCTCTTGTGCTTTGTGCGGAAATCGTGTGATTTACTTAGCTTTGATTGGGATTTACAGTGATGTGTGTGGTGTGGGTGGTGTAGAGTGCTCGG 15 29485321 0.989180221 7 14 129 1 1.230448921 0.764705882 0.133333333 0.235294118 15 0 0 17 3R:29485262-29485355 7 4.5 2730 FBgn0039663 234.51 8.906666667 13.64 0.019188947 0.505239521 0.329912023 2 3 2.5 0.2 dme-miR-965-3p 6mer3-8 TACGCT 3R 29599189 29599194 + 3R_29599189_29599194_+ 0.535070141 0.59142266 0.5632464 0.039847306 alph FBtr0085445|FBtr0085443|FBtr0085446|FBtr0085442 29598177|29597798|29598177|29598177 29599231|29599234|29599231|29599231 3R + 29599164 29599211 5'utr alph FlyBase G46750.2 AAATCTTAAGAGAGAAAAGCAAAATTACGCTCGAGTTTGTAGTAAATG 159 29599188 0.881126017 6 154 790 0.971098266 1.62324929 0.144508671 0.088050314 0.161849711 159 2 3 168 3R:29599164-29599211 6 alph FBtr0085443|FBtr0085446|FBtr0085442|FBtr0085445 29597798|29598177|29598177|29598177 29599234|29599231|29599231|29599231 TACGCT 6mer3-8 dme-miR-965-3p 3R + 29599164 29599209 5'utr alph FlyBase G35264.1 AAATCTTAAGAGAGAAAAGCAAAATTACGCTCGAGTTTGTAGTAAA 65 29599188 0.958281791 4 63 302 0.956989247 1.472268752 0.096774194 0.369230769 0.559139785 65 2 2 89 3R:29599164-29599209 6 110.5 2731 FBgn0086361 5795.586667 263.87 406.87 0.019066232 0.418766817 0.271585519 1 1 1 0.2 dme-miR-33-5p 7mer-A1 AATGCAA 3R 29753170 29753176 + 3R_29753170_29753176_+ 0.763998402 0.741201003 0.752599703 0.016120196 yata FBtr0333822|FBtr0085477 29752956|29752956 29754528|29753328 3R + 29753116 29753202 3'utr yata FlyBase G46828.1 CATTTGGCCGCTCTGTGTGTGCTTTGTGTTTGTATTGGGTGCCAGTTTGCATTAAATGCAATCTCAGTGTCTCGAGCCTCCATTTCG 35 29753172 0.776217084 10 32 263 0.926829268 1.579783597 0.219512195 0.114285714 0.243902439 35 3 0 38 3R:29753116-29753202 7 yata FBtr0333822|FBtr0085477 29752956|29752956 29754528|29753328 AATGCAA 7mer-A1 dme-miR-33-5p 3R + 29753114 29753205 3'utr yata FlyBase G35323.1 CCCATTTGGCCGCTCTGTGTGTGCTTTGTGTTTGTATTGGGTGCCAGTTTGCATTAAATGCAATCTCAGTGTCTCGAGCCTCCATTTCGATT 23 29753183 0.979708004 14 23 185 1 1.505149978 0.25 0.304347826 0.5 23 0 0 32 3R:29753114-29753205 7 19.5 2732 FBgn0260990 1641.69 44.94333333 68.84666667 0.011878004 0.4338797 0.283238114 -2 -13 -7.5 0.2 dme-miR-1006-3p 6mer2-7 GAATTT 3R 29753657 29753662 + 3R_29753657_29753662_+ 0.999393196 0.9998205 0.999606848 0.000302147 yata FBtr0333822 29752956 29754528 3R + 29753567 29753674 3'utr yata FlyBase G46832.1 GATGCCAATCCACGCGATTTTCGAGGGACAGTGAATATTTAGAAATCTAAACTAAACGTATTTTTGCGAATGGAGCGTAACCAAAATTGTGAATTTTAATACATAAAT 99 29753653 0.98167078 12 98 719 0.991935484 2.089905111 0.072580645 0.191919192 0.35483871 99 1 0 123 3R:29753567-29753674 6 yata FBtr0333822 29752956 29754528 GAATTT 6mer2-7 dme-miR-1006-3p 3R + 29753569 29753674 3'utr yata FlyBase G35327.1 TGCCAATCCACGCGATTTTCGAGGGACAGTGAATATTTAGAAATCTAAACTAAACGTATTTTTGCGAATGGAGCGTAACCAAAATTGTGAATTTTAATACATAAAT 64 29753653 0.981141553 10 64 470 1 2.008600172 0.049019608 0.453125 0.656862745 64 0 0 102 3R:29753569-29753674 6 71 2733 FBgn0260990 1641.69 44.94333333 68.84666667 0.043248116 1.579767114 1.031277234 4 4 4 0.2 dme-miR-307a-3p 7mer-A1 GTTGTGA 3R 29793449 29793455 + 3R_29793449_29793455_+ 0.379121276 0.366638666 0.372879971 0.008826531 kay FBtr0099990|FBtr0099988|FBtr0290076|FBtr0099989|FBtr0339165 29793023|29793023|29793023|29793023|29793023 29794113|29794113|29794113|29794113|29794113 3R + 29793243 29793681 3'utr kay FlyBase G46861.3 TGATTTCGCTATGTCTTTTACATACGCCGAGGAGCTATGTACATATGTTATGTACTTGTAATTTGTGCAATTTTCAAACCTCTTCATTGCGCGTTGTATATTTTCAAAAAATATAAGAACGCGAACGCGAACGCGAACGACCGACGATGCATGATGAGAATGATAAGGATAATGATGATAATAGGGCGTGTAGATTTGCAGGATGCGTTGTGATATTTATTATAAAACGAATACAAAAGATGCGAGGATGAAACAAAGTAGAAAGCAAACAGGAGCGTCTAATGAAAGGAACTAAGCCGGTTTTAAAATTGTACATTTAAACGAATCGTAAAGCGTAAATATACTATAAAACAAAACAAAGTGAATATATATTCAGCATACAAACTAAATACAATGCCTTGAGAGAGAATTAAGAAATGCAAACCTTTATATATAGAGA 1895 29793449 0.982144577 81 1793 12918 0.946983547 1.811239773 0.099634369 0.131926121 0.248171846 1895 85 31 2072 3R:29793243-29793681 7 kay FBtr0099989|FBtr0339165|FBtr0099988|FBtr0290076|FBtr0099990 29793023|29793023|29793023|29793023|29793023 29794113|29794113|29794113|29794113|29794113 GTTGTGA 7mer-A1 dme-miR-307a-3p 3R + 29793372 29793565 3'utr kay FlyBase G35357.1 AACGCGAACGACCGACGATGCATGATGAGAATGATAAGGATAATGATGATAATAGGGCGTGTAGATTTGCAGGATGCGTTGTGATATTTATTATAAAACGAATACAAAAGATGCGAGGATGAAACAAAGTAGAAAGCAAACAGGAGCGTCTAATGAAAGGAACTAAGCCGGTTTTAAAATTGTACATTTAAACG 707 29793450 0.982516699 35 668 6088 0.945641987 1.623679925 0.112464855 0.374823197 0.585754452 707 35 23 1009 3R:29793372-29793565 7 654.5 2734 FBgn0001297 8038.743333 271.3133333 416.43 0.081418198 2.412339976 1.571692721 0 -1 -0.5 0.2 dme-miR-304-5p 6mer3-8 TGAGAT 3R 29793772 29793777 + 3R_29793772_29793777_+ 0.714919173 0.573066652 0.643992913 0.100304865 kay FBtr0099990|FBtr0099988|FBtr0290076|FBtr0099989|FBtr0339165 29793023|29793023|29793023|29793023|29793023 29794113|29794113|29794113|29794113|29794113 3R + 29793713 29793807 3'utr kay FlyBase G46862.1 AAAGCTAAACAATAATGGCGTTGAAGCGAGTTTTATATTGAGCAAAAGCAAATGTGAAATGAGATAAATATACTTATTGTGTACTCTGTAAGCTG 338 29793772 0.863552508 18 318 1418 0.94188862 1.686859614 0.457627119 0.162721893 0.314769976 338 17 7 389 3R:29793713-29793807 6 kay FBtr0099989|FBtr0339165|FBtr0099988|FBtr0290076|FBtr0099990 29793023|29793023|29793023|29793023|29793023 29794113|29794113|29794113|29794113|29794113 TGAGAT 6mer3-8 dme-miR-304-5p 3R + 29793712 29793814 3'utr kay FlyBase G35358.1 TAAAGCTAAACAATAATGGCGTTGAAGCGAGTTTTATATTGAGCAAAAGCAAATGTGAAATGAGATAAATATACTTATTGTGTACTCTGTAAGCTGCAGTAGA 251 29793772 0.882069315 19 239 974 0.942465753 2.536558443 0.534246575 0.326693227 0.536986301 251 21 0 344 3R:29793712-29793814 6 239 2735 FBgn0001297 8038.743333 271.3133333 416.43 0.029731015 0.880900312 0.57392599 0 0 0 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 29800958 29800964 + 3R_29800958_29800964_+ 0.481236726 0.422335184 0.451785955 0.04164965 Drice FBtr0085482|FBtr0085482|FBtr0085482 29800916|29800916|29800916 29801584|29801584|29801584 3R + 29800902 29800976 stop_codon Drice FlyBase G46870.1 AGCCGGACGGGTTTGATGGCTAATGGTATGGATCAAACGGTGGGTACGGCGAGGTGTGTGATAAACCAAGTCGCA 84 29800956 0.961690115 10 77 383 0.920454545 1.306425028 0.079545455 0.035714286 0.079545455 84 4 3 81 3R:29800902-29800976 7 Drice FBtr0085482|FBtr0085482|FBtr0085482 29800916|29800916|29800916 29801584|29801584|29801584 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 29800901 29800978 stop_codon Drice FlyBase G35369.1 CAGCCGGACGGGTTTGATGGCTAATGGTATGGATCAAACGGTGGGTACGGCGAGGTGTGTGATAAACCAAGTCGCAAT 51 29800956 0.946941896 5 49 210 0.95 1.880813592 0.075 0.392156863 0.6125 51 4 0 76 3R:29800901-29800978 7 61 2736 FBgn0019972 801.2566667 50.41666667 76.82666667 0.076130412 1.209917355 0.793995141 2 2 2 0.2 dme-miR-31a-5p 7mer-A1 CTTGCCA 3R 29801236 29801242 + 3R_29801236_29801242_+ 0.820744598 0.436988038 0.628866318 0.271356894 Drice FBtr0085482 29800916 29801584 3R + 29801185 29801364 3'utr Drice FlyBase G46872.1 TTAGAAATCTAAGAGGTTTTTACTCCGGCCAAAATTTTTTGACAATTTTAACTTGCCAACTGAACAAAGACGATCTCAAAATTTTAAATTCTCTACTAAACCTTATCATAGAACAACTTGCGCCTCTTTGATTCTCGATCAGGAATGTCGGCCCACCCTTATCTATATCTACCTTAGACC 203 29801245 0.899714444 33 181 1315 0.890688259 1.740362689 0.052631579 0.192118227 0.336032389 203 24 3 220 3R:29801185-29801364 7 Drice FBtr0085482 29800916 29801584 CTTGCCA 7mer-A1 dme-miR-31a-5p 3R + 29801187 29801348 3'utr Drice FlyBase G35371.1 AGAAATCTAAGAGGTTTTTACTCCGGCCAAAATTTTTTGACAATTTTAACTTGCCAACTGAACAAAGACGATCTCAAAATTTTAAATTCTCTACTAAACCTTATCATAGAACAACTTGCGCCTCTTTGATTCTCGATCAGGAATGTCGGCCCACCCTTATCT 171 29801245 0.843688429 31 151 1063 0.891050584 1.514737442 0.038910506 0.374269006 0.583657588 171 22 6 229 3R:29801187-29801348 7 52 2737 FBgn0019972 801.2566667 50.41666667 76.82666667 0.064898056 1.031404959 0.676848317 -9 -9 -9 0.2 dme-miR-33-5p 7mer-m1 AATGCAC 3R 29801526 29801532 + 3R_29801526_29801532_+ 0.8194103 0.821068294 0.820239297 0.001172383 Drice FBtr0085482 29800916 29801584 3R + 29801494 29801580 3'utr Drice FlyBase G46874.1 ATACTATTTCTATGCCATTTGTACTCTTATATAATGCACATTAGCAAATGTTCTCCTTTCAAGTTAACCGCTAATAAATCCGATTGA 17 29801542 0.987907305 11 17 153 1 1.342422681 0 0.235294118 0.409090909 17 0 0 22 3R:29801494-29801580 7 Drice FBtr0085482 29800916 29801584 AATGCAC 7mer-m1 dme-miR-33-5p 3R + 29801528 29801581 3'utr Drice FlyBase G35374.1 TGCACATTAGCAAATGTTCTCCTTTCAAGTTAACCGCTAATAAATCCGATTGAA 6 29801542 0.979483929 5 6 41 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3R:29801528-29801581 4 3 2738 FBgn0019972 801.2566667 50.41666667 76.82666667 0.003744119 0.059504132 0.039048941 -16 -16 -16 0.2 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 29804321 29804326 - 3R_29804321_29804326_- 0.981723845 0.99269024 0.987207043 0.007754416 ncd FBtr0344976|FBtr0085534 29804288|29804288 29804405|29804405 3R - 29804291 29804362 3'utr ncd FlyBase G55721.1 ACCTGTTATTGCTTAATTTATGTGTGTTTACTTTTAGTGCAAATAAACTAATAAAGTGCTGGAATTCAAAGC 15 29804328 0.989524394 6 15 145 1 1.278753601 0.368421053 0.266666667 0.421052632 15 0 0 19 3R:29804291-29804362 6 ncd FBtr0344976|FBtr0085534 29804288|29804288 29804405|29804405 GTGCAA 6mer3-8 dme-miR-92b-3p 3R - 29804294 29804352 3'utr ncd FlyBase G42042.1 GCTTAATTTATGTGTGTTTACTTTTAGTGCAAATAAACTAATAAAGTGCTGGAATTCAA 9 29804329 0.989776452 5 8 77 1 1.230448921 0.470588235 0.333333333 0.647058824 9 0 0 17 3R:29804294-29804352 6 9.5 2739 FBgn0002924 2335.956667 120.6666667 184.3066667 0.004066856 0.078729282 0.051544527 2 3 2.5 0.2 dme-miR-965-3p 7mer-A1 ACGCTTA 3R 29827492 29827498 - 3R_29827492_29827498_- 0.81841639 0.81811858 0.818267485 0.000210576 Atg16 FBtr0339144|FBtr0085528|FBtr0085529|FBtr0085530 29827279|29827279|29827279|29827279 29827559|29827559|29827559|29827559 3R - 29827417 29827536 3'utr Atg16 FlyBase G55743.2 CTCGAGCCAGTCGGATGCAATCCAATTCCGAAACTGAAACGCTTAAGAAGTCAGAGCAGTGCTGCAATCTGCTGTACATAGTAAATTCGGTCGACGTTTTAACAACTTTACTTGATTATT 30 29827511 0.855641554 10 27 154 0.918918919 1.531478917 0.189189189 0.2 0.351351351 30 3 0 34 3R:29827417-29827536 7 Atg16 FBtr0085530|FBtr0085529|FBtr0085528|FBtr0339144 29827279|29827279|29827279|29827279 29827559|29827559|29827559|29827559 ACGCTTA 7mer-A1 dme-miR-965-3p 3R - 29827456 29827535 3'utr Atg16 FlyBase G42060.2 TCGAGCCAGTCGGATGCAATCCAATTCCGAAACTGAAACGCTTAAGAAGTCAGAGCAGTGCTGCAATCTGCTGTACATAG 19 29827511 0.811113343 9 14 70 0.8 1.301029996 0.08 0.315789474 0.48 19 5 0 20 3R:29827456-29827535 7 9 2740 FBgn0039705 890.6666667 49.85333333 76.6 0.01010479 0.180529553 0.117493473 13 13 13 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 3R 29874914 29874919 + 3R_29874914_29874919_+ 0.983013772 0.985277852 0.984145812 0.00160096 CG34133 FBtr0301073|FBtr0335004 29874565|29874565 29875159|29875159 3R + 29874872 29874941 3'utr CG34133 FlyBase G46948.1 CGAAAGTCAATTGTATATTGTTATGCCCTTGTAAGTTACATTTTGACTGTACAGATGCTTTGATTTCGTT 21 29874931 0.689624384 11 20 200 0.958333333 1.361727836 0.416666667 0.095238095 0.208333333 21 1 0 23 3R:29874872-29874941 6 CG34133 FBtr0335004|FBtr0301073 29874565|29874565 29875159|29875159 TTGACT 6mer3-8 dme-miR-1012-3p 3R + 29874868 29874941 3'utr CG34133 FlyBase G35429.1 ATTTCGAAAGTCAATTGTATATTGTTATGCCCTTGTAAGTTACATTTTGACTGTACAGATGCTTTGATTTCGTT 10 29874931 0.99052473 6 10 104 1 1.146128036 0.214285714 0.4 0.571428571 10 0 0 14 3R:29874868-29874941 6 12 2741 FBgn0083969 922.7466667 26.26 40.29 0.013004653 0.456968774 0.297840655 -17 -17 -17 0.2 dme-bantam-3p 6mer3-8 TGATCT 3R 29902981 29902986 + 3R_29902981_29902986_+ 0.930612734 0.906216391 0.918414563 0.017250789 CG31038 FBtr0085494|FBtr0333274|FBtr0333275|FBtr0085497|FBtr0085498 29902590|29902590|29902590|29902590|29902590 29903231|29903231|29903231|29903231|29903231 3R + 29902953 29903000 3'utr CG31038 FlyBase G46952.1 ACCAGCCTCTGTGGTTAGGAGTCCTTTGTGATCTTCAGTTGTAAGTTT 14 29902986 0.961245604 5 11 140 0.785714286 0.740362689 0.285714286 0 0 14 2 1 11 3R:29902953-29903000 6 CG31038 FBtr0085494|FBtr0085498|FBtr0085497|FBtr0333275|FBtr0333274 29902590|29902590|29902590|29902590|29902590 29903231|29903231|29903231|29903231|29903231 TGATCT 6mer3-8 dme-bantam-3p 3R + 29902955 29903000 3'utr CG31038 FlyBase G35432.1 CAGCCTCTGTGGTTAGGAGTCCTTTGTGATCTTCAGTTGTAAGTTT 13 29902978 0.659194469 4 13 151 1 1.301029996 0.1 0.384615385 0.6 13 0 0 20 3R:29902955-29903000 6 13 2742 FBgn0051038 142.6666667 4.59 7.016666667 0.091121495 2.832244009 1.852731591 -5 3 -1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 29991254 29991259 - 3R_29991254_29991259_- 0.705495014 0.729714805 0.717604909 0.017125985 Acph-1 FBtr0085610|FBtr0085610|FBtr0085610|FBtr0085609|FBtr0085609|FBtr0085609 29991142|29991142|29991142|29991142|29991142|29991142 29991583|29991583|29991583|29991583|29991583|29991583 3R - 29991227 29991283 3'utr Acph-1 FlyBase G55798.1 AGTGAAAGATATGGAATACAAAGACTGTGAATAGCGATCTTGAAGTTGCATACATAT 45 29991256 0.957190171 5 44 178 1 1.72427587 0.150943396 0.181818182 0.320754717 44 0 0 53 3R:29991227-29991283 6 Acph-1 FBtr0085610|FBtr0085610|FBtr0085610|FBtr0085609|FBtr0085609|FBtr0085609 29991142|29991142|29991142|29991142|29991142|29991142 29991583|29991583|29991583|29991583|29991583|29991583 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 29991238 29991290 3'utr Acph-1 FlyBase G42100.1 GTTATTCAGTGAAAGATATGGAATACAAAGACTGTGAATAGCGATCTTGAAGT 49 29991255 0.806846915 7 48 193 0.984375 1.799340549 0.25 0.224489796 0.40625 49 1 0 63 3R:29991238-29991290 6 44.5 2743 FBgn0000032 305.1533333 19.16 28.97333333 0.145828327 2.322546973 1.535895076 -3 -4 -3.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 30016092 30016099 - 3R_30016092_30016099_- 0.629386643 0.630891911 0.630139277 0.001064408 Mgat2 FBtr0334705|FBtr0085602|FBtr0100418 30015511|30015511|30015511 30016371|30016371|30016371 3R - 30016063 30016117 3'utr Mgat2 FlyBase G55839.1 TCATACTATAAGTAACCCTCTAGTCACACATTCAATTGGAATCGCCGTGTTGTTG 42 30016099 0.726505363 8 37 207 0.884615385 1.185636577 0 0.19047619 0.346153846 42 4 2 46 3R:30016063-30016117 8 Mgat2 FBtr0100418|FBtr0085602|FBtr0334705 30015511|30015511|30015511 30016371|30016371|30016371 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R - 30016053 30016115 3'utr Mgat2 FlyBase G42129.1 ATACTATAAGTAACCCTCTAGTCACACATTCAATTGGAATCGCCGTGTTGTTGCAACCTCCAA 32 30016099 0.827681364 8 30 139 0.941176471 1.681241237 0 0.40625 0.62745098 32 3 0 48 3R:30016053-30016115 8 32.5 2744 FBgn0039738 328.6966667 12.42333333 18.86666667 0.098875356 2.616045076 1.722614841 0 0 0 0.2 dme-miR-304-5p 6mer2-7 GAGATT 3R 30034240 30034245 + 3R_30034240_30034245_+ 0.878431788 0.793064344 0.835748066 0.060363938 Axn FBtr0300600 30031347 30035311 3R + 30034200 30034372 stop_codon Axn FlyBase G46997.1 GACGCACTGCGAGGACCCGGACAGTCCAGTGATTCAGGAAGAGATTGTTAACGACTCCGACATACTGCCGCTATTCGGAGACAAAGCGATGGGTCTTGTCAAGCCATCCGATTAATATTAAGCATTTAGCGTAGATTTTGTATTAAGGCAAATCGTGAGTGTGGCTTGGTGCA 48 30034233 0.955991947 17 48 229 1 1.748188027 0.160714286 0.145833333 0.267857143 48 0 0 56 3R:30034200-30034372 6 Axn FBtr0300600 30031347 30035311 GAGATT 6mer2-7 dme-miR-304-5p 3R + 30034186 30034288 intron-3'utr Axn FlyBase G35462.1 AGGTTCTTCTTCAAGACGCACTGCGAGGACCCGGACAGTCCAGTGATTCAGGAAGAGATTGTTAACGACTCCGACATACTGCCGCTATTCGGAGACAAAGCGA 30 30034232 0.950631355 11 26 113 0.833333333 1.653212514 0.222222222 0.5 0.722222222 30 9 0 45 3R:30034186-30034288 6 20.5 2745 FBgn0026597 1043.036667 27.21666667 41.75333333 0.019654151 0.753214942 0.490978764 7 8 7.5 0.2 dme-miR-92b-3p 7mer-A1 TGCAATA 3R 30034828 30034834 + 3R_30034828_30034834_+ 0.566740881 0.600788905 0.583764893 0.024075572 Axn FBtr0085553|FBtr0290030|FBtr0085554|FBtr0334703|FBtr0334702|FBtr0300600|FBtr0085555 30034313|30034313|30034313|30034313|30034313|30031347|30034313 30035311|30035311|30034919|30035311|30035311|30035311|30035311 3R + 30034803 30034848 3'utr Axn FlyBase G47000.1 TACCTTTTACTAACTACGGACTGCCTGCAATAAATTTTGTTAATAT 51 30034828 0.906043811 6 48 260 0.983050847 1.763427994 0 0.137254902 0.254237288 51 1 0 58 3R:30034803-30034848 7 Axn FBtr0300600|FBtr0085555|FBtr0334702|FBtr0085554|FBtr0334703|FBtr0085553|FBtr0290030 30031347|30034313|30034313|30034313|30034313|30034313|30034313 30035311|30035311|30035311|30034919|30035311|30035311|30035311 TGCAATA 7mer-A1 dme-miR-92b-3p 3R + 30034783 30034845 3'utr Axn FlyBase G35466.1 CTCGATTGGGATTTGTTTGTTACCTTTTACTAACTACGGACTGCCTGCAATAAATTTTGTTAA 35 30034828 0.971899113 6 34 211 0.955555556 1.156347201 0.088888889 0.228571429 0.4 35 0 2 43 3R:30034783-30034845 7 39 2746 FBgn0026597 1043.036667 27.21666667 41.75333333 0.037390824 1.432945499 0.934057161 0 0 0 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 30042986 30042992 + 3R_30042986_30042992_+ 0.619902387 0.645647447 0.632774917 0.018204464 Sry-alpha FBtr0085557|FBtr0346862 30042853|30042853 30043071|30043071 3R + 30042965 30042998 3'utr Sry-alpha FlyBase G47010.1 TAATTAGCTACCTAAGTCAATTGTGTTCTTTACA 22 30042985 0.801680176 2 22 228 1 1.361727836 0 0.045454545 0.086956522 22 0 0 23 3R:30042965-30042998 7 Sry-alpha FBtr0346862|FBtr0085557 30042853|30042853 30043071|30043071 TGTGTTC 7mer-m8 dme-miR-317-3p 3R + 30042965 30042997 3'utr Sry-alpha FlyBase G35473.1 TAATTAGCTACCTAAGTCAATTGTGTTCTTTAC 7 30042985 0.794980966 2 7 77 1 1.176091259 0 0.714285714 0.866666667 7 0 0 15 3R:30042965-30042997 7 14.5 2747 FBgn0003510 16.33666667 1.003333333 1.446666667 0.887573964 14.45182724 10.02304147 1 1 1 0.2 dme-miR-252-5p 6mer3-8 GTACTT 3R 30044839 30044844 + 3R_30044839_30044844_+ 0.993125881 0.990996858 0.992061369 0.00150543 Sry-delta FBtr0085558 30044779 30044886 3R + 30044818 30044868 3'utr Sry-delta FlyBase G47019.1 CTAGTGTATTTCCTCCTCTTTGTACTTGATTATTGTAGATTCCTACAAAAT 84 30044838 0.783664992 10 84 1163 1 1.982271233 0.052083333 0.130952381 0.239583333 84 0 0 96 3R:30044818-30044868 6 Sry-delta FBtr0085558 30044779 30044886 GTACTT 6mer3-8 dme-miR-252-5p 3R + 30044802 30044859 3'utr Sry-delta FlyBase G35479.1 AATTGTTTATCTTTCCCTAGTGTATTTCCTCCTCTTTGTACTTGATTATTGTAGATTC 58 30044838 0.994172369 6 58 754 1 1.913813852 0.024390244 0.344827586 0.536585366 58 0 0 82 3R:30044802-30044859 6 70 2748 FBgn0003512 609.7433333 48.67 74.76 0.114802403 1.438257654 0.936329588 1 1 1 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3R 30048581 30048587 + 3R_30048581_30048587_+ 0.514070105 0.518710048 0.516390076 0.003280905 CG7943 FBtr0085560|FBtr0085559 30048217|30048217 30048665|30048665 3R + 30048565 30048646 3'utr CG7943 FlyBase G47026.1 TGTTCGCCAATAACTTTGTGATTGATTGAAGATACTACAACTGATTAATTAACGCGGTAGATTCAATGTTCTTAAACGAAAA 131 30048580 0.754764705 8 123 1114 0.957575758 1.596597096 0.254545455 0.213740458 0.375757576 131 4 3 158 3R:30048565-30048646 7 CG7943 FBtr0085560|FBtr0085559 30048217|30048217 30048665|30048665 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 30048565 30048607 3'utr CG7943 FlyBase G35484.1 TGTTCGCCAATAACTTTGTGATTGATTGAAGATACTACAACTG 84 30048580 0.707214988 6 81 699 0.968992248 2.096910013 0.333333333 0.345238095 0.573643411 84 4 0 125 3R:30048565-30048607 7 103 2749 FBgn0039741 255.38 18.77666667 28.61666667 0.403320542 5.485531688 3.599301107 1 1 1 0.2 dme-miR-305-5p 7mer-A1 GTACAAA 3R 30057972 30057978 + 3R_30057972_30057978_+ 0.775187337 0.779380498 0.777283918 0.00296504 CG7950 FBtr0085563|FBtr0085564 30057934|30057934 30058131|30058131 3R + 30057955 30057983 3'utr CG7950 FlyBase G47036.1 GAGCTAGGTGTGACTTCGTACAAAATAAA 6 30057970 0.717180945 2 6 31 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 3R:30057955-30057983 7 CG7950 FBtr0085563|FBtr0085564 30057934|30057934 30058131|30058131 GTACAAA 7mer-A1 dme-miR-305-5p 3R + 30057955 30057988 3'utr CG7950 FlyBase G35489.1 GAGCTAGGTGTGACTTCGTACAAAATAAATAAAA 17 30057970 0.712796543 4 15 99 0.913043478 1.322219295 0 0.235294118 0.434782609 17 2 0 21 3R:30057955-30057988 7 11.5 2750 FBgn0260468 214.1466667 22.56333333 34.67333333 0.053701513 0.509676466 0.331666987 2 2 2 0.2 dme-miR-34-5p 6mer2-7 ACTGCC 3R 30121077 30121082 + 3R_30121077_30121082_+ 0.998660463 0.998427611 0.998544037 0.000164685 sima FBtr0344376|FBtr0344374|FBtr0344373|FBtr0344375 30120757|30120757|30120757|30120149 30121798|30121798|30121798|30121798 3R + 30121059 30121095 3'utr sima FlyBase G47060.1 AGTTTTGTAGCCATGTTAACTGCCTAGAACAGAAGAA 19 30121083 0.956777077 5 17 115 0.904761905 1.278753601 0.19047619 0.105263158 0.19047619 19 2 0 19 3R:30121059-30121095 6 sima FBtr0344376|FBtr0344374|FBtr0344373|FBtr0344375 30120757|30120757|30120757|30120149 30121798|30121798|30121798|30121798 ACTGCC 6mer2-7 dme-miR-34-5p 3R + 30121057 30121124 3'utr sima FlyBase G35504.1 ATAGTTTTGTAGCCATGTTAACTGCCTAGAACAGAAGAATATACACGTATGTAATTTAGTCTTAATGT 17 30121083 0.976756264 6 15 106 0.956521739 1.342422681 0.391304348 0.176470588 0.391304348 17 1 0 22 3R:30121057-30121124 6 17 2751 FBgn0266411 1469.71 34.50666667 52.49333333 0.011566908 0.492658423 0.323850648 -6 -6 -6 0.2 dme-miR-12-5p 7mer-A1 ATACTCA 3R 30213387 30213393 - 3R_30213387_30213393_- 0.820169988 0.821912726 0.821041357 0.001232275 CecB FBtr0085640 30213313 30213475 3R - 30213368 30213404 3'utr CecB FlyBase G55877.1 AATGAAAATAGATACTCAATGCCAATGTCAAATTATT 8 30213385 0.946256182 4 8 34 1 1.146128036 0.071428571 0.375 0.642857143 8 0 0 14 3R:30213368-30213404 7 CecB FBtr0085640 30213313 30213475 ATACTCA 7mer-A1 dme-miR-12-5p 3R - 30213366 30213404 3'utr CecB FlyBase G42159.1 AATGAAAATAGATACTCAATGCCAATGTCAAATTATTAA 11 30213396 0.891514199 4 11 55 1 1.176091259 0 0.272727273 0.466666667 11 0 0 15 3R:30213366-30213404 7 9.5 2752 FBgn0000278 26.33333333 8.696666667 13.18 0.360759494 1.092372557 0.720789074 -8 3 -2.5 0.2 dme-miR-1008-3p 6mer2-7 GCTGTG 3R 30362338 30362343 + 3R_30362338_30362343_+ 0.99900672 0.965940931 0.982473825 0.023381051 hdc FBtr0330311 30360539 30372382 3R + 30362321 30362409 3'utr hdc FlyBase G47092.1 AACAAATCATGATAATTGCTGTGCTGCTCAATAACACAAAAAATCATTAAAATAAAAGGAGAAGGAGTAGAGTAGGAGAGTAAAACAGG 22 30362337 0.973597643 10 19 105 0.88 1.041392685 0.12 0.136363636 0.24 22 2 1 22 3R:30362321-30362409 6 hdc FBtr0330311 30360539 30372382 GCTGTG 6mer2-7 dme-miR-1008-3p 3R + 30362254 30362379 3'utr hdc FlyBase G35523.1 ATTTACATCACGATTGAGGGAAAAGTTTTATTTAGCAAAAATTGAAGGCAGGGCATTAAATTGTTTAAACAAATCATGATAATTGCTGTGCTGCTCAATAACACAAAAAATCATTAAAATAAAAGG 24 30362336 0.974045984 11 21 134 0.911764706 1.491361694 0.088235294 0.375 0.558823529 24 3 0 31 3R:30362254-30362379 6 11 2753 FBgn0010113 3260.306667 58.23333333 89.73 0.003373916 0.188895249 0.122589992 1 2 1.5 0.2 dme-bantam-3p 6mer2-7 GATCTC 3R 30362933 30362938 + 3R_30362933_30362938_+ 0.859853836 0.698967291 0.779410563 0.113763935 hdc FBtr0330311 30360539 30372382 3R + 30362847 30362998 3'utr hdc FlyBase G47095.1 AGTCTAAGTGTTAGGTTATAGCGATCTTCTTGTATATGTCTAGGGTTCTTCTCTTTGTCTAAATAGCAGAGCAGCCGTATGTGATGGATCTCTAAAGGTAGAGTGAGGACCCCGCAGGTGCGAGCAAACCACATGCAGGCACTCACTATCGA 375 30362939 0.939350247 27 334 2464 0.913242009 1.488116639 0.351598174 0.149333333 0.271689498 375 26 12 400 3R:30362847-30362998 6 hdc FBtr0330311 30360539 30372382 GATCTC 6mer2-7 dme-bantam-3p 3R + 30362842 30362994 3'utr hdc FlyBase G35525.1 TATTAAGTCTAAGTGTTAGGTTATAGCGATCTTCTTGTATATGTCTAGGGTTCTTCTCTTTGTCTAAATAGCAGAGCAGCCGTATGTGATGGATCTCTAAAGGTAGAGTGAGGACCCCGCAGGTGCGAGCAAACCACATGCAGGCACTCACTA 297 30362939 0.794945248 26 269 2013 0.907756813 1.335457901 0.381551363 0.420875421 0.639412998 297 25 19 433 3R:30362842-30362994 6 224.5 2754 FBgn0010113 3260.306667 58.23333333 89.73 0.068858553 3.855180309 2.501950295 -6 -6 -6 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 30363285 30363290 + 3R_30363285_30363290_+ 0.999798281 0.977545175 0.988671728 0.015735318 hdc FBtr0330311|FBtr0330311|FBtr0330311 30360539|30360539|30360539 30372382|30372382|30372382 3R + 30363269 30363300 3'utr hdc FlyBase G47097.1 AAAATAACTTTCCCGTCTGTGAAATTTTTAAT 10 30363283 0.635331799 7 9 88 0.818181818 0.954242509 0.090909091 0.1 0.181818182 10 2 0 9 3R:30363269-30363300 6 hdc FBtr0330311|FBtr0330311|FBtr0330311 30360539|30360539|30360539 30372382|30372382|30372382 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 30363273 30363294 3'utr hdc FlyBase G35528.1 TAACTTTCCCGTCTGTGAAATT 5 30363284 0.744774703 2 5 37 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:30363273-30363294 6 7 2755 FBgn0010113 3260.306667 58.23333333 89.73 0.002147037 0.120206068 0.078011813 2 1 1.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 30364315 30364320 + 3R_30364315_30364320_+ 0.999501629 0.956757612 0.97812962 0.030224572 hdc FBtr0330311|FBtr0330311|FBtr0330311 30360539|30360539|30360539 30372382|30372382|30372382 3R + 30364296 30364336 3'utr hdc FlyBase G47104.1 GAAAAACCTCCTCGAATAACTGTGAAATCCCCTTCCTTAGA 78 30364323 0.788175108 6 70 525 0.898876404 1.903089987 0.02247191 0.102564103 0.213483146 78 9 0 80 3R:30364296-30364336 6 hdc FBtr0330311|FBtr0330311|FBtr0330311 30360539|30360539|30360539 30372382|30372382|30372382 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 30364294 30364333 3'utr hdc FlyBase G35534.1 TTGAAAAACCTCCTCGAATAACTGTGAAATCCCCTTCCTT 38 30364323 0.827664009 5 35 241 0.947368421 1.431363764 0 0.368421053 0.578947368 38 2 1 54 3R:30364294-30364333 6 58 2756 FBgn0010113 3260.306667 58.23333333 89.73 0.017789738 0.995993131 0.646383595 -8 -8 -8 0.2 dme-miR-277-3p 7mer-A1 GCATTTA 3R 30364756 30364762 + 3R_30364756_30364762_+ 0.823349523 0.823349451 0.823349487 0 hdc FBtr0330311 30360539 30372382 3R + 30364673 30364803 3'utr hdc FlyBase G47106.1 AAGTACATACCCTATACCATATACCCTATACCGTATAAAACGTACACCTAACTAACCTAAATTGATAGAAACTACACTTTTTGGCATTTACTTGAGAGGATTATATATAAGTTTGGCACAGTTATATATAA 68 30364759 0.976689973 16 59 624 0.85 1.531478917 0.2875 0.132352941 0.2625 68 11 1 68 3R:30364673-30364803 7 hdc FBtr0330311 30360539 30372382 GCATTTA 7mer-A1 dme-miR-277-3p 3R + 30364705 30364785 3'utr hdc FlyBase G35537.1 GTATAAAACGTACACCTAACTAACCTAAATTGATAGAAACTACACTTTTTGGCATTTACTTGAGAGGATTATATATAAGTT 30 30364760 0.994444207 11 20 263 0.708333333 1.054357662 0.291666667 0.566666667 0.729166667 30 12 2 34 3R:30364705-30364785 7 34.5 2757 FBgn0010113 3260.306667 58.23333333 89.73 0.010581827 0.59244419 0.384486794 -3 -4 -3.5 0.2 dme-bantam-3p 6mer3-8 TGATCT 3R 30365656 30365661 + 3R_30365656_30365661_+ 0.999978992 0.975125449 0.98755222 0.017574149 hdc FBtr0330311 30360539 30372382 3R + 30365639 30365687 3'utr hdc FlyBase G47111.1 CCTTTTGAATCTTTTCGTGATCTTCAGTTACTGAAACATGCCAAAATCC 10 30365652 0.84015546 6 9 79 0.909090909 0.698970004 0.090909091 0.1 0.181818182 10 0 1 10 3R:30365639-30365687 6 hdc FBtr0330311 30360539 30372382 TGATCT 6mer3-8 dme-bantam-3p 3R + 30365599 30365687 3'utr hdc FlyBase G35542.1 ATATTTTATGTTCAACAAATGAAATATTTGCGCGCCTTTCCCTTTTGAATCTTTTCGTGATCTTCAGTTACTGAAACATGCCAAAATCC 12 30365655 0.990645419 8 12 112 1 1.204119983 0.0625 0.333333333 0.5 12 0 0 16 3R:30365599-30365687 6 8 2758 FBgn0010113 3260.306667 58.23333333 89.73 0.002453757 0.137378363 0.089156358 4 1 2.5 0.2 dme-miR-305-5p 7mer-A1 GTACAAA 3R 30365802 30365808 + 3R_30365802_30365808_+ 0.680235468 0.513912158 0.597073813 0.117608333 hdc FBtr0330311 30360539 30372382 3R + 30365779 30365856 3'utr hdc FlyBase G47113.1 CTCAGATCATCTGATGACGAAATGTACAAATTGGTGAAGTTTAGGCACTTTCAACCGCAGTCCTCATCCGAATTCCCA 22 30365809 0.85876262 8 21 149 0.961538462 1.397940009 0.346153846 0.136363636 0.269230769 22 1 0 25 3R:30365779-30365856 7 hdc FBtr0330311 30360539 30372382 GTACAAA 7mer-A1 dme-miR-305-5p 3R + 30365777 30365817 3'utr hdc FlyBase G35543.1 TTCTCAGATCATCTGATGACGAAATGTACAAATTGGTGAAG 17 30365810 0.715907938 6 15 125 0.904761905 1.278753601 0.714285714 0.235294118 0.380952381 17 2 0 19 3R:30365777-30365817 7 17.5 2759 FBgn0010113 3260.306667 58.23333333 89.73 0.005367593 0.300515169 0.195029533 -7 -8 -7.5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 30366074 30366079 + 3R_30366074_30366079_+ 0.989490526 0.997031123 0.993260825 0.005332009 hdc FBtr0330311 30360539 30372382 3R + 30366051 30366103 3'utr hdc FlyBase G47114.1 AATGTGTAATATATGTATACTTTGTACCTTTTTATGTTATACACAAGTCCCCA 79 30366081 0.903100435 10 75 978 0.970588235 1.995635195 0.098039216 0.227848101 0.401960784 79 3 0 99 3R:30366051-30366103 6 hdc FBtr0330311 30360539 30372382 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 30366045 30366095 3'utr hdc FlyBase G35544.1 ATTCGTAATGTGTAATATATGTATACTTTGTACCTTTTTATGTTATACACA 65 30366081 0.827728355 9 65 833 1 1.954242509 0.233333333 0.307692308 0.5 65 0 0 90 3R:30366045-30366095 6 71.5 2760 FBgn0010113 3260.306667 58.23333333 89.73 0.021930452 1.227819118 0.796834949 -7 -7 -7 0.2 dme-miR-283-5p 8mer-m1 TGATATTT 3R 30368998 30369005 + 3R_30368998_30369005_+ 0.495229088 0.469289406 0.482259247 0.018342138 hdc FBtr0330311 30360539 30372382 3R + 30368980 30369017 3'utr hdc FlyBase G47119.1 AAAGAGCTCCCCGATATGTGATATTTAATTGGTAATTG 14 30368994 0.800616335 4 14 110 1 1.230448921 0.058823529 0.214285714 0.352941176 14 0 0 17 3R:30368980-30369017 8 hdc FBtr0330311 30360539 30372382 TGATATTT 8mer-m1 dme-miR-283-5p 3R + 30368982 30369005 3'utr hdc FlyBase G35546.1 AGAGCTCCCCGATATGTGATATTT 5 30368994 0.81224685 2 5 35 1 0.84509804 0 0.4 0.571428571 5 0 0 7 3R:30368982-30369005 8 9.5 2761 FBgn0010113 3260.306667 58.23333333 89.73 0.002913836 0.163136806 0.105873175 4 4 4 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3R 30385761 30385767 - 3R_30385761_30385767_- 0.490933328 0.48522666 0.488079994 0.004035176 Fer1HCH FBtr0085635 30385571 30386297 3R - 30385639 30385793 3'utr Fer1HCH FlyBase G55884.2 ACGTCTGTTCTTTCTTATCAACCACTTGTGATTTCCGTACACCTCGGGAGGGGGCTCCACATTATGCAATCGCCGAGATTTCGCCTAGGCTTAAGTGGAATCGCTCATTCGCATAGTAAGACACTCAGCACAACCCATTCAATACATCCTATATC 411 30385761 0.830147327 27 377 2895 0.915662651 1.579783597 0.06626506 0.175182482 0.319277108 411 31 11 456 3R:30385639-30385793 7 Fer1HCH FBtr0085631|FBtr0085634|FBtr0306588|FBtr0085635|FBtr0085633|FBtr0085632 30385571|30385571|30385571|30385571|30385571|30385571 30385983|30385983|30385983|30386297|30385983|30385983 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 30385655 30385863 NoAnnotation G42166.1 AGCCAAGTCGGCGACTGGCCAATAAATTATCCGTTCGACTGCGATCCTCAAACCAGCACAGCAAAATTCCACGTCTGTTCTTTCTTATCAACCACTTGTGATTTCCGTACACCTCGGGAGGGGGCTCCACATTATGCAATCGCCGAGATTTCGCCTAGGCTTAAGTGGAATCGCTCATTCGCATAGTAAGACACTCAGCACAACCCATT 289 30385761 0.969122581 39 278 1979 0.968609865 2.334453751 0.047085202 0.401384083 0.612107623 289 13 1 432 3R:30385655-30385863 7 223.5 2762 FBgn0015222 3048.623333 308.1333333 465.1 0.073311779 0.725335353 0.480541819 -6 -6 -6 0.2 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 3R 30386109 30386115 - 3R_30386109_30386115_- 0.823273477 0.822300377 0.822786927 0.000688086 Fer1HCH FBtr0085635 30385571 30386297 3R - 30386085 30386144 5'utr Fer1HCH FlyBase G55885.1 AGCCCTACAACCACTACCACCTGGTGGACTACCTGACCGGTGTCTATCTGGAGGAGCAGC 16 30386121 0.958667426 6 15 75 0.947368421 1.255272505 0 0.1875 0.315789474 16 1 0 18 3R:30386085-30386144 7 Fer1HCH FBtr0085635 30385571 30386297 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R - 30386073 30386148 5'utr Fer1HCH FlyBase G42167.1 AACAAGCCCTACAACCACTACCACCTGGTGGACTACCTGACCGGTGTCTATCTGGAGGAGCAGCTCCACGGACAGC 10 30386119 0.934152345 6 8 41 0.789473684 1.176091259 0 0.4 0.684210526 10 4 0 15 3R:30386073-30386148 7 11 2763 FBgn0015222 3048.623333 308.1333333 465.1 0.003608186 0.035698832 0.023650828 6 4 5 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3R 30456795 30456801 - 3R_30456795_30456801_- 0.442957495 0.443110003 0.443033749 0.000107834 CG2224 FBtr0331358 30456439 30457058 3R - 30456787 30456852 3'utr CG2224 FlyBase G55921.1 TTGCGTTCCGGCCTCTTGGTTCGTTGCATTCTTTCACTTAAGAACCTCTAATGTGATTTTCAATTG 37 30456795 0.826107322 10 37 283 1 1.73239376 0.111111111 0.378378378 0.574074074 37 0 0 54 3R:30456787-30456852 7 CG2224 FBtr0331358 30456439 30457058 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 30456765 30456857 3'utr CG2224 FlyBase G42194.1 GTTTATTGCGTTCCGGCCTCTTGGTTCGTTGCATTCTTTCACTTAAGAACCTCTAATGTGATTTTCAATTGTGGCTTACCCTTGCGTTCGTTA 31 30456795 0.98484663 13 29 239 0.875 1.243038049 0.15 0.225806452 0.4 31 4 1 35 3R:30456765-30456857 7 28.5 2764 FBgn0039773 322.3166667 18.33333333 28.13666667 0.088422359 1.554545455 1.012913162 -6 -6 -6 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 30786718 30786725 + 3R_30786718_30786725_+ 0.442579083 0.435175528 0.438877305 0.005235136 zfh1 FBtr0331180|FBtr0085701|FBtr0085702 30786658|30786202|30786202 30789202|30789202|30787177 3R + 30786690 30786765 3'utr zfh1 FlyBase G47224.1 AAGCCAGCCAAGCCAGCACTTACAGGCTGTACTTAAAAACCGACGAACAGAAAATCTCAAAATGTGCAGGAACACA 200 30786717 0.947028463 9 188 797 0.950207469 1.882714228 0.290456432 0.165 0.307053942 200 10 2 229 3R:30786690-30786765 8 zfh1 FBtr0331180|FBtr0085701|FBtr0085702 30786658|30786202|30786202 30789202|30789202|30787177 GTACTTAA 8mer-A1 dme-miR-252-5p 3R + 30786691 30786753 3'utr zfh1 FlyBase G35627.1 AGCCAGCCAAGCCAGCACTTACAGGCTGTACTTAAAAACCGACGAACAGAAAATCTCAAAATG 96 30786717 0.943372587 6 93 382 0.98540146 2.130333768 0.248175182 0.302083333 0.510948905 96 2 0 135 3R:30786691-30786753 8 137.5 2765 FBgn0004606 2785.276667 51.94333333 79.77333333 0.04936673 2.647115446 1.723633629 1 1 1 0.2 dme-miR-8-3p 6mer2-7 AGTATT 3R 30786939 30786944 + 3R_30786939_30786944_+ 0.970798844 0.997688392 0.984243618 0.019013819 zfh1 FBtr0331180|FBtr0085701|FBtr0085702 30786658|30786202|30786202 30789202|30789202|30787177 3R + 30786835 30787005 3'utr zfh1 FlyBase G47226.1 TTTTTTATAGCCATATAGACAGGGGAAATGTAAGAAGCCGTAGTTGAAAACCTTTCGTTTGAGCGAATTTATTATTTTTACAATGTTGCAACCACTTTGTTCTTAGTATTTTATTAGTTTAGCTTAACTTAGCTTACCGCCTAAGTTCGAGCGCAGGGCTGAATCATTTTG 139 30786937 0.929754304 33 134 1188 0.964497041 1.911157609 0.272189349 0.18705036 0.331360947 139 5 1 163 3R:30786835-30787005 6 zfh1 FBtr0331180|FBtr0085701|FBtr0085702 30786658|30786202|30786202 30789202|30789202|30787177 AGTATT 6mer2-7 dme-miR-8-3p 3R + 30786834 30787013 3'utr zfh1 FlyBase G35628.1 ATTTTTTATAGCCATATAGACAGGGGAAATGTAAGAAGCCGTAGTTGAAAACCTTTCGTTTGAGCGAATTTATTATTTTTACAATGTTGCAACCACTTTGTTCTTAGTATTTTATTAGTTTAGCTTAACTTAGCTTACCGCCTAAGTTCGAGCGCAGGGCTGAATCATTTTGTTTGGCCC 97 30786937 0.989411513 27 87 860 0.919708029 1.401400541 0.328467153 0.288659794 0.496350365 97 7 4 126 3R:30786834-30787013 6 61.5 2766 FBgn0004606 2785.276667 51.94333333 79.77333333 0.022080392 1.183982545 0.770934314 2 2 2 0.2 dme-miR-965-3p 7mer-m8 TACGCTT 3R 30787553 30787559 + 3R_30787553_30787559_+ 0.539602019 0.620190143 0.579896081 0.056984392 zfh1 FBtr0331180|FBtr0085701 30786658|30786202 30789202|30789202 3R + 30787527 30787647 3'utr zfh1 FlyBase G47231.1 AAGGAAAACCCCAGTCGTTCGCGAACTACGCTTTAAATTTAAACTTCTTCCCCACTAAGTCGCGAAATGAGCACAAAACACCTACAAGATCATTCCAATTTGGCCAGAGCCGCCGCGCCCC 79 30787559 0.982949211 14 76 360 0.969387755 1.977723605 0.040816327 0.164556962 0.326530612 79 3 0 95 3R:30787527-30787647 7 zfh1 FBtr0331180|FBtr0085701 30786658|30786202 30789202|30789202 TACGCTT 7mer-m8 dme-miR-965-3p 3R + 30787527 30787572 3'utr zfh1 FlyBase G35632.2 AAGGAAAACCCCAGTCGTTCGCGAACTACGCTTTAAATTTAAACTT 38 30787554 0.747952944 6 35 233 0.964912281 1.740362689 0.035087719 0.315789474 0.543859649 38 2 0 55 3R:30787527-30787572 7 35.5 2767 FBgn0004606 2785.276667 51.94333333 79.77333333 0.012745592 0.683437079 0.445010864 -6 -1 -3.5 0.2 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3R 30788299 30788305 + 3R_30788299_30788305_+ 0.645624916 0.668323313 0.656974115 0.016050193 zfh1 FBtr0331180|FBtr0331180|FBtr0085701|FBtr0085701 30786658|30786658|30786202|30786202 30789202|30789202|30789202|30789202 3R + 30788263 30788373 3'utr zfh1 FlyBase G47237.1 CGAGAGGAAGAAAAACTCACAAAAAAATGCATTTAATACTTAATTAGTTTTTATATTCTTGTATTTTAACGAGGAGGAGGCCGATCGGCGGCGATATATATATATATATAT 61 30788295 0.985373517 15 50 420 0.847222222 1.484299839 0.125 0.163934426 0.291666667 61 10 1 61 3R:30788263-30788373 7 zfh1 FBtr0331180|FBtr0331180|FBtr0085701|FBtr0085701 30786658|30786658|30786202|30786202 30789202|30789202|30789202|30789202 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3R + 30788272 30788346 3'utr zfh1 FlyBase G35635.1 GAAAAACTCACAAAAAAATGCATTTAATACTTAATTAGTTTTTATATTCTTGTATTTTAACGAGGAGGAGGCCGA 20 30788293 0.985168379 9 17 134 0.954545455 1.322219295 0 0.157894737 0.272727273 19 1 0 21 3R:30788272-30788346 7 21 2768 FBgn0004606 2785.276667 51.94333333 79.77333333 0.007539646 0.404286723 0.263245863 4 6 5 0.2 dme-miR-283-5p 7mer-m1 GATATTT 3R 30788675 30788681 + 3R_30788675_30788681_+ 0.71430233 0.449287857 0.581795093 0.187393479 zfh1 FBtr0331180|FBtr0085701 30786658|30786202 30789202|30789202 3R + 30788583 30788700 3'utr zfh1 FlyBase G47240.1 AAAAAAAAAAACCCTTAACAACAACAAAATGTTAACTTAAACACTAAAAGAAGAACTTATTTTTAAGCGCAAATACTATGTGGTTTGTGATGGATATTTGCACTCTAGGGCCTTATAT 16 30788679 0.988876104 13 15 123 0.941176471 0.903089987 0.176470588 0.0625 0.117647059 16 0 1 16 3R:30788583-30788700 7 zfh1 FBtr0331180|FBtr0085701 30786658|30786202 30789202|30789202 GATATTT 7mer-m1 dme-miR-283-5p 3R + 30788648 30788712 3'utr zfh1 FlyBase G35638.1 AGCGCAAATACTATGTGGTTTGTGATGGATATTTGCACTCTAGGGCCTTATATGAAATACACACT 6 30788681 0.984989414 5 6 42 1 1.041392685 0.181818182 0.666666667 0.818181818 6 0 0 11 3R:30788648-30788712 7 7 2769 FBgn0004606 2785.276667 51.94333333 79.77333333 0.002513215 0.134762241 0.087748621 -4 -6 -5 0.2 dme-miR-1003-3p 6mer3-8 ATGTGA 3R 30790164 30790169 - 3R_30790164_30790169_- 0.986638179 0.993250049 0.989944114 0.004675249 wts FBtr0085720 30789623 30790974 3R - 30790118 30790192 3'utr wts FlyBase G55945.1 AAGAACAAACTTAGACGTAGCCTATGTGAAAAGCTAGCAATGTTAGACCAACTTGTTGAATGCCAAATGAAATTG 14 30790140 0.899057861 7 13 82 0.956521739 1.342422681 0.304347826 0.285714286 0.565217391 14 1 0 22 3R:30790118-30790192 6 wts FBtr0085720 30789623 30790974 ATGTGA 6mer3-8 dme-miR-1003-3p 3R - 30790117 30790192 3'utr wts FlyBase G42206.1 AAGAACAAACTTAGACGTAGCCTATGTGAAAAGCTAGCAATGTTAGACCAACTTGTTGAATGCCAAATGAAATTGT 14 30790168 0.919738153 7 14 63 1 1.301029996 0.2 0.357142857 0.55 14 0 0 20 3R:30790117-30790192 6 6 2770 FBgn0011739 1493.683333 31.27666667 48.31 0.004016916 0.1918363 0.124197889 -29 -1 -15 0.2 dme-miR-283-5p 8mer-m1 TGATATTT 3R 31054978 31054985 - 3R_31054978_31054985_- 0.477142569 0.444968438 0.461055503 0.022750595 dco FBtr0334548 31054083 31056528 3R - 31054975 31055010 3'utr dco FlyBase G55989.1 AAAACTTAAATAAAAGTACATTACGTGATATTTCTT 9 31054990 0.983442932 4 9 74 1 1.079181246 0 0.333333333 0.5 9 0 0 12 3R:31054975-31055010 8 dco FBtr0334548 31054083 31056528 TGATATTT 8mer-m1 dme-miR-283-5p 3R - 31054972 31055003 3'utr dco FlyBase G42251.1 AAATAAAAGTACATTACGTGATATTTCTTACA 16 31054990 0.775267441 5 15 127 0.956521739 1.041392685 0.043478261 0.4375 0.608695652 16 0 1 22 3R:31054972-31055003 8 12.5 2771 FBgn0002413 1939.763333 65.62333333 100.4966667 0.006444085 0.190481028 0.124382235 5 5 5 0.2 dme-miR-277-3p 6mer3-8 TGCATT 3R 31055331 31055336 - 3R_31055331_31055336_- 0.714568068 0.999995151 0.857281609 0.201827438 dco FBtr0085743|FBtr0085742|FBtr0085744|FBtr0334548 31055184|31055184|31055184|31054083 31056528|31056528|31056528|31056528 3R - 31055321 31055371 3'utr dco FlyBase G55991.1 ATATAAATTGCGTTAGACATACACAACAAAACAATTGCATTAACGTTTCGA 7 31055337 0.863259506 4 7 39 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 3R:31055321-31055371 6 dco FBtr0085744|FBtr0334548|FBtr0085743|FBtr0085742 31055184|31054083|31055184|31055184 31056528|31056528|31056528|31056528 TGCATT 6mer3-8 dme-miR-277-3p 3R - 31055280 31055364 3'utr dco FlyBase G42252.1 TTGCGTTAGACATACACAACAAAACAATTGCATTAACGTTTCGATTTAACAATGTAAGTAATGGCCCTGCGGAGGAAAGTTACAC 10 31055336 0.945193932 7 10 48 1 1.146128036 0.214285714 0.3 0.5 10 0 0 14 3R:31055280-31055364 6 4 2772 FBgn0002413 1939.763333 65.62333333 100.4966667 0.002062107 0.060953929 0.039802315 1 0 0.5 0.2 dme-miR-317-3p 8mer-A1 TGTGTTCA 3R 31055508 31055515 - 3R_31055508_31055515_- 0.631136783 0.631133585 0.631135184 2.26E-06 dco FBtr0085743|FBtr0085742|FBtr0085744|FBtr0334548 31055184|31055184|31055184|31054083 31056528|31056528|31056528|31056528 3R - 31055502 31055540 3'utr dco FlyBase G55992.1 CTTTCGTGGTCTGCACTTTGCTGCCTGTGTTCATATATA 6 31055524 0.981246061 4 4 44 0.875 0.84509804 0.125 0.166666667 0.375 6 1 0 7 3R:31055502-31055540 8 dco FBtr0085744|FBtr0334548|FBtr0085743|FBtr0085742 31055184|31054083|31055184|31055184 31056528|31056528|31056528|31056528 TGTGTTCA 8mer-A1 dme-miR-317-3p 3R - 31055505 31055541 3'utr dco FlyBase G42254.1 ACTTTCGTGGTCTGCACTTTGCTGCCTGTGTTCATAT 7 31055525 0.755162635 4 5 55 0.75 0.77815125 0 0.142857143 0.25 7 2 0 6 3R:31055505-31055541 8 3.5 2773 FBgn0002413 1939.763333 65.62333333 100.4966667 0.001804344 0.053334688 0.034827026 9 10 9.5 0.2 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 31055692 31055699 - 3R_31055692_31055699_- 0.624422148 0.625363794 0.624892971 0.000665882 dco FBtr0085743|FBtr0085742|FBtr0085744|FBtr0334548 31055184|31055184|31055184|31054083 31056528|31056528|31056528|31056528 3R - 31055624 31055748 3'utr dco FlyBase G55993.1 GTAACCTAAGTTGATGGTAAAATGATTGCGATTACCACGTGCAGTTCTCTAGCTTTAAGCAACGCTCTGACTTATAAGGCCCTCCTATGTTATATTATGTAACCTTCTGTACCGCCTACTCCCCT 59 31055709 0.90956727 18 53 479 0.910447761 1.30820858 0.313432836 0.101694915 0.208955224 59 4 2 61 3R:31055624-31055748 8 dco FBtr0085744|FBtr0334548|FBtr0085743|FBtr0085742 31055184|31054083|31055184|31055184 31056528|31056528|31056528|31056528 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R - 31055658 31055813 3'utr dco FlyBase G42255.1 AGGCTCTAGCTCTAGCGAATCCAATCCATACAAAAGCATATGCCACACAGCAAGGCACCCACATTGTAACCTAAGTTGATGGTAAAATGATTGCGATTACCACGTGCAGTTCTCTAGCTTTAAGCAACGCTCTGACTTATAAGGCCCTCCTATGTT 35 31055709 0.981664305 15 32 233 0.964285714 1.255272505 0.285714286 0.485714286 0.678571429 35 0 2 54 3R:31055658-31055813 8 32 2774 FBgn0002413 1939.763333 65.62333333 100.4966667 0.016496858 0.487631432 0.318418521 10 10 10 0.2 dme-miR-14-3p 6mer2-7 AGACTG 3R 31228017 31228022 + 3R_31228017_31228022_+ 0.999901759 0.999979413 0.999940586 5.49E-05 CG12054 FBtr0085758 31227841 31228491 3R + 31227902 31228062 3'utr CG12054 FlyBase G47283.1 AAATTGACCAGCTTGTCCGTATACGAAAGACATTCTAGACTCGACAGAATGCCGATCTTCTTGGGGGCAGTCCAGCCCACTCACTCACCAAAACACACATTTGGAAACATTTCGTAGACTGCTTACTTGTTCTTAGTTTAGACTTCGAGTCCAATCAATTG 130 31228016 0.984629081 24 125 993 0.968944099 2.193124598 0.099378882 0.2 0.354037267 130 5 0 156 3R:31227902-31228062 6 CG12054 FBtr0085758 31227841 31228491 AGACTG 6mer2-7 dme-miR-14-3p 3R + 31227992 31228058 3'utr CG12054 FlyBase G35667.1 AAACACACATTTGGAAACATTTCGTAGACTGCTTACTTGTTCTTAGTTTAGACTTCGAGTCCAATCA 74 31228015 0.919267044 14 68 579 0.923076923 2.033423755 0.025641026 0.445945946 0.64957265 74 9 0 108 3R:31227992-31228058 6 81.5 2775 FBgn0039831 3333.656667 103.7033333 158.5733333 0.024447629 0.785895664 0.51395779 1 2 1.5 0.2 dme-bantam-3p 7mer-m8 TGATCTC 3R 31228214 31228220 + 3R_31228214_31228220_+ 0.657080154 0.657980201 0.657530178 0.000636396 CG12054 FBtr0085758 31227841 31228491 3R + 31228160 31228245 3'utr CG12054 FlyBase G47285.1 ATTCATCGATTGTATGTATGACTTTCATGCTTGTATTAAACTATTTACAACTGCTGATCTCCTCTTAATTTAATTAGGCTATGCAA 340 31228213 0.828338802 19 323 3019 0.955916473 1.836745966 0.011600928 0.217647059 0.382830626 340 14 5 412 3R:31228160-31228245 7 CG12054 FBtr0085758 31227841 31228491 TGATCTC 7mer-m8 dme-bantam-3p 3R + 31228156 31228245 3'utr CG12054 FlyBase G35668.1 ATTTATTCATCGATTGTATGTATGACTTTCATGCTTGTATTAAACTATTTACAACTGCTGATCTCCTCTTAATTTAATTAGGCTATGCAA 215 31228212 0.83012683 19 196 1897 0.912052117 1.84509804 0.016286645 0.339534884 0.537459283 215 24 3 280 3R:31228156-31228245 7 253.5 2776 FBgn0039831 3333.656667 103.7033333 158.5733333 0.076042624 2.444473016 1.598629446 1 2 1.5 0.2 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 31229157 31229163 + 3R_31229157_31229163_+ 0.810038392 0.810495294 0.810266843 0.000323077 CG12054 FBtr0335408|FBtr0113312|FBtr0335409 31229123|31229123|31229123 31231259|31229387|31229387 3R + 31229132 31229188 3'utr CG12054 FlyBase G47288.1 ATCGGATGAGAAGGCAAGAGAGTTGGCTGTGATGAAGTAGTAACTAACTGACTAACA 385 31229155 0.780017737 10 378 2042 0.977375566 1.857332496 0.332579186 0.124675325 0.237556561 385 5 5 432 3R:31229132-31229188 7 CG12054 FBtr0335409|FBtr0113312|FBtr0335408 31229123|31229123|31229123 31229387|31229387|31231259 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R + 31229127 31229245 3'utr CG12054 FlyBase G35673.1 GGCATATCGGATGAGAAGGCAAGAGAGTTGGCTGTGATGAAGTAGTAACTAACTGACTAACAAACCTGACAAGAGGCGGAGAAAGAGGATTCGTCAATAAGGCAGATGGGAAAAGGATG 345 31229155 0.837597036 10 336 1742 0.974854932 2.225309282 0.353965184 0.344927536 0.562862669 345 11 2 504 3R:31229127-31229245 7 358.5 2777 FBgn0039831 3333.656667 103.7033333 158.5733333 0.107539569 3.456976632 2.260783654 2 2 2 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3R 31229651 31229657 + 3R_31229651_31229657_+ 0.805757776 0.808151346 0.806954561 0.00169246 CG12054 FBtr0335408 31229123 31231259 3R + 31229608 31229678 3'utr CG12054 FlyBase G47293.1 AGCGACAACATTTTAGTAAATACATTTGGAGAATTTTCTTCAACTAGTCATTATTGTAGTTAAATTAAATT 91 31229633 0.770142959 16 89 930 0.980392157 2 0.078431373 0.10989011 0.205882353 91 2 0 100 3R:31229608-31229678 7 CG12054 FBtr0335408 31229123 31231259 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 31229592 31229678 3'utr CG12054 FlyBase G35677.1 AAAAATTAATTATACAAGCGACAACATTTTAGTAAATACATTTGGAGAATTTTCTTCAACTAGTCATTATTGTAGTTAAATTAAATT 44 31229659 0.989950037 15 44 435 1 1.819543936 0.075757576 0.454545455 0.636363636 44 0 0 66 3R:31229592-31229678 7 38.5 2778 FBgn0039831 3333.656667 103.7033333 158.5733333 0.01154888 0.371251326 0.242789876 18 -8 5 0.2 dme-miR-305-5p 7mer-m1 GTACAAT 3R 31229775 31229781 + 3R_31229775_31229781_+ 0.765586655 0.741555881 0.753571268 0.016992342 CG12054 FBtr0335408 31229123 31231259 3R + 31229701 31229835 3'utr CG12054 FlyBase G47294.1 ACATAACTTTCTAACCTACTGGTTGGTGGAATTCCCGAACCCTATATTTATAACTTAAGAAACCTCTATCCTGTGTACAATTTCAATGAAATCTTAGTGAAGGGTCTTTCCCCAATCAGTTGTTTGCGTCATTTT 50 31229795 0.987434289 19 44 404 0.901639344 1.439332694 0.37704918 0.18 0.327868852 50 5 1 55 3R:31229701-31229835 7 CG12054 FBtr0335408 31229123 31231259 GTACAAT 7mer-m1 dme-miR-305-5p 3R + 31229759 31229822 3'utr CG12054 FlyBase G35679.1 GAAACCTCTATCCTGTGTACAATTTCAATGAAATCTTAGTGAAGGGTCTTTCCCCAATCAGTTG 22 31229794 0.668951611 8 19 170 0.838709677 1.414973348 0.483870968 0.318181818 0.516129032 22 5 0 26 3R:31229759-31229822 7 19.5 2779 FBgn0039831 3333.656667 103.7033333 158.5733333 0.005849433 0.188036386 0.122971496 -20 -19 -19.5 0.2 dme-miR-1008-3p 7mer-m8 AGCTGTG 3R 31230131 31230137 + 3R_31230131_31230137_+ 0.626161933 0.59527963 0.610720781 0.021837084 CG12054 FBtr0335408 31229123 31231259 3R + 31230108 31230153 3'utr CG12054 FlyBase G47298.1 TATAGAGCAGAGCATGCATCTGTAGCTGTGTGAGTGTTTGTCCGTG 45 31230138 0.663285063 7 43 337 0.964285714 1.431363764 0.482142857 0.2 0.357142857 45 1 1 54 3R:31230108-31230153 7 CG12054 FBtr0335408 31229123 31231259 AGCTGTG 7mer-m8 dme-miR-1008-3p 3R + 31230110 31230153 3'utr CG12054 FlyBase G35681.1 TAGAGCAGAGCATGCATCTGTAGCTGTGTGAGTGTTTGTCCGTG 31 31230138 0.742704348 7 31 209 1 1.662757832 0.608695652 0.322580645 0.543478261 31 0 0 46 3R:31230110-31230153 7 38 2780 FBgn0039831 3333.656667 103.7033333 158.5733333 0.011398894 0.36642988 0.239636761 -7 -7 -7 0.2 dme-miR-14-3p 7mer-m8 AAGACTG 3R 31230801 31230807 + 3R_31230801_31230807_+ 0.671759606 0.671674911 0.671717259 5.99E-05 CG12054 FBtr0335408 31229123 31231259 3R + 31230775 31230831 3'utr CG12054 FlyBase G47303.1 AATAAAATGAGTATGTCATCTTATATAAGACTGCTGTTATGTTCGTAAATATATTTA 90 31230799 0.703281641 9 84 844 0.904761905 1.977723605 0.142857143 0.144444444 0.266666667 90 10 0 95 3R:31230775-31230831 7 CG12054 FBtr0335408 31229123 31231259 AAGACTG 7mer-m8 dme-miR-14-3p 3R + 31230777 31230830 3'utr CG12054 FlyBase G35684.1 TAAAATGAGTATGTCATCTTATATAAGACTGCTGTTATGTTCGTAAATATATTT 75 31230799 0.701161977 9 61 664 0.836538462 1.939519253 0.115384615 0.293333333 0.490384615 75 17 0 87 3R:31230777-31230830 7 80 2781 FBgn0039831 3333.656667 103.7033333 158.5733333 0.023997672 0.771431327 0.504498444 2 2 2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 31231220 31231225 + 3R_31231220_31231225_+ 0.514759773 0.667715947 0.59123786 0.108156296 CG12054 FBtr0335408|FBtr0335408|FBtr0335408 31229123|31229123|31229123 31231259|31231259|31231259 3R + 31231202 31231239 3'utr CG12054 FlyBase G47305.1 TATTCTCTTTTTGCTTTATGTGATCTATTACATACTAC 23 31231221 0.684373941 7 22 271 0.965517241 1.146128036 0 0.173913043 0.344827586 23 0 1 28 3R:31231202-31231239 6 CG12054 FBtr0335408|FBtr0335408|FBtr0335408 31229123|31229123|31229123 31231259|31231259|31231259 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 31231192 31231239 3'utr CG12054 FlyBase G35686.1 AGTAGTAAAATATTCTCTTTTTGCTTTATGTGATCTATTACATACTAC 14 31231218 0.899099265 10 13 160 0.958333333 1.361727836 0 0.5 0.708333333 14 1 0 23 3R:31231192-31231239 6 17.5 2782 FBgn0039831 3333.656667 103.7033333 158.5733333 0.005249491 0.168750603 0.110359035 -1 2 0.5 0.2 dme-miR-1002-5p 8mer-A1 CTACTTAA 3R 31401470 31401477 + 3R_31401470_31401477_+ 0.611292901 0.622456347 0.616874624 0.007893716 Gcn2 FBtr0334552|FBtr0085787|FBtr0334551 31401376|31401376|31401376 31401560|31402013|31401560 3R + 31401416 31401501 3'utr Gcn2 FlyBase G47330.1 AGACCAGCCAGTAGTGTAAGCTCGAAAGTGTCACAAATTATTTTCGCCGAAATTCTACTTAACTGGCTGCCCTCCGTGCCATTAAC 11 31401487 0.945997837 8 11 66 1 1.113943352 0.076923077 0.090909091 0.230769231 11 0 0 13 3R:31401416-31401501 8 Gcn2 FBtr0334552|FBtr0085787|FBtr0334551 31401376|31401376|31401376 31401560|31402013|31401560 CTACTTAA 8mer-A1 dme-miR-1002-5p 3R + 31401458 31401496 3'utr Gcn2 FlyBase G35701.1 TTCGCCGAAATTCTACTTAACTGGCTGCCCTCCGTGCCA 8 31401468 0.953398027 5 6 50 0.642857143 0.954242509 0.285714286 0.625 0.785714286 8 5 0 9 3R:31401458-31401496 8 7 2783 FBgn0019990 1106.633333 23.54666667 35.94666667 0.006325492 0.297281993 0.194732938 -17 2 -7.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 31401608 31401613 + 3R_31401608_31401613_+ 0.999958509 0.994499585 0.997229047 0.003860025 Gcn2 FBtr0085787 31401376 31402013 3R + 31401594 31401629 3'utr Gcn2 FlyBase G47331.1 TTATTGAATGCCTTTCTAGTGGAAGCTCTCATTCAT 18 31401607 0.614506343 5 16 143 0.904761905 1.278753601 0.19047619 0.111111111 0.238095238 18 2 0 19 3R:31401594-31401629 6 Gcn2 FBtr0085787 31401376 31402013 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 31401596 31401626 3'utr Gcn2 FlyBase G35702.1 ATTGAATGCCTTTCTAGTGGAAGCTCTCATT 7 31401607 0.662043147 2 7 52 1 1.079181246 0.25 0.571428571 0.75 7 0 0 12 3R:31401596-31401626 6 12.5 2784 FBgn0019990 1106.633333 23.54666667 35.94666667 0.011295521 0.530860702 0.347737389 1 1 1 0.2 dme-miR-282-5p 8mer-A1 AGAGGCTA 3R 31401801 31401808 + 3R_31401801_31401808_+ 0.627182955 0.633684948 0.630433952 0.004597538 Gcn2 FBtr0085787 31401376 31402013 3R + 31401783 31401829 3'utr Gcn2 FlyBase G47332.1 TCGAAATTAAAGTTAAGTAGAGGCTAATATTTTCAGAGAAAATTCTT 48 31401800 0.893086411 7 46 326 0.949152542 1.271066772 0.084745763 0.229166667 0.372881356 48 1 2 56 3R:31401783-31401829 8 Gcn2 FBtr0085787 31401376 31402013 AGAGGCTA 8mer-A1 dme-miR-282-5p 3R + 31401783 31401821 3'utr Gcn2 FlyBase G35704.1 TCGAAATTAAAGTTAAGTAGAGGCTAATATTTTCAGAGA 35 31401800 0.870531403 5 34 228 0.979166667 1.672097858 0 0.285714286 0.479166667 35 1 0 47 3R:31401783-31401821 8 41.5 2785 FBgn0019990 1106.633333 23.54666667 35.94666667 0.03750113 1.762457531 1.154488131 1 1 1 0.2 dme-miR-252-5p 6mer3-8 GTACTT 3R 31456662 31456667 + 3R_31456662_31456667_+ 0.538858895 0.769021808 0.653940352 0.162749747 Gprk2 FBtr0334555|FBtr0085788 31456465|31456465 31456776|31457873 3R + 31456614 31456672 3'utr Gprk2 FlyBase G47357.1 TACATCGGTTTATCCTTCAGTTGACGCGCAAGAAGCATTTTTGAAATTGTACTTTTACA 9 31456654 0.707698896 6 9 65 1 1.113943352 0.153846154 0.333333333 0.538461538 9 0 0 13 3R:31456614-31456672 6 Gprk2 FBtr0085788|FBtr0334555 31456465|31456465 31457873|31456776 GTACTT 6mer3-8 dme-miR-252-5p 3R + 31456632 31456679 3'utr Gprk2 FlyBase G35730.1 AGTTGACGCGCAAGAAGCATTTTTGAAATTGTACTTTTACATCAAATT 7 31456654 0.975940677 5 7 50 1 1 0.2 0.428571429 0.6 7 0 0 10 3R:31456632-31456679 6 3 2786 FBgn0261988 1488.626667 40.02 61.47666667 0.00201528 0.074962519 0.048799002 8 8 8 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 31456999 31457004 + 3R_31456999_31457004_+ 0.701024784 0.561445771 0.631235278 0.098697257 Gprk2 FBtr0085788|FBtr0085788|FBtr0085788 31456465|31456465|31456465 31457873|31457873|31457873 3R + 31456983 31457098 3'utr Gprk2 FlyBase G47360.1 TTTTTGTATAGTAGTTTGTGATCGACGGGACAGCGTTGGACGATAGATGTTCTAGTTAGCATTTGTAAGTTAAGAAAATGACATGAATACTCGAAAACTTGAATGCATTTTTAACA 66 31456998 0.719675097 21 59 480 0.898734177 1.851258349 0.341772152 0.181818182 0.316455696 66 8 0 71 3R:31456983-31457098 6 Gprk2 FBtr0085788|FBtr0085788|FBtr0085788 31456465|31456465|31456465 31457873|31457873|31457873 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 31456950 31457059 3'utr Gprk2 FlyBase G35733.1 ACAGCACTACGTAGACGGCTGAGTAATATGTAATTTTTGTATAGTAGTTTGTGATCGACGGGACAGCGTTGGACGATAGATGTTCTAGTTAGCATTTGTAAGTTAAGAAA 52 31456998 0.98585672 11 45 372 0.879518072 1.562292864 0.481927711 0.5 0.686746988 52 9 1 73 3R:31456950-31457059 6 35 2787 FBgn0261988 1488.626667 40.02 61.47666667 0.023511604 0.874562719 0.569321694 1 1 1 0.2 dme-miR-1006-3p 7mer-A1 GAATTTA 3R 31457481 31457487 + 3R_31457481_31457487_+ 0.757274213 0.823349562 0.790311888 0.046722363 Gprk2 FBtr0085788 31456465 31457873 3R + 31457453 31457512 3'utr Gprk2 FlyBase G47364.1 AGAAAGAAACAAAAGTAAACCAATTGGAGAATTTATTATGTTAGTATGAAAATTAATTAT 10 31457476 0.989455083 6 10 92 1 1.041392685 0.363636364 0.1 0.181818182 10 0 0 11 3R:31457453-31457512 7 Gprk2 FBtr0085788 31456465 31457873 GAATTTA 7mer-A1 dme-miR-1006-3p 3R + 31457452 31457500 3'utr Gprk2 FlyBase G35738.1 AAGAAAGAAACAAAAGTAAACCAATTGGAGAATTTATTATGTTAGTATG 7 31457484 0.98631948 4 6 47 0.909090909 1 0.363636364 0.285714286 0.545454545 7 1 0 10 3R:31457452-31457500 7 7.5 2788 FBgn0261988 1488.626667 40.02 61.47666667 0.005038201 0.187406297 0.121997506 5 -3 1 0.2 dme-miR-1003-3p 8mer-A1 ATGTGAGA 3R 31575989 31575996 - 3R_31575989_31575996_- 0.641918766 0.641312783 0.641615774 0.000428507 pygo FBtr0085806 31575833 31576891 3R - 31575922 31576012 3'utr pygo FlyBase G56037.1 AAGAAATTATGAATTCATGTGAGAAAGGTTAATTTGTAATTTAAGACGAATGTGGAGGACGCAGCGAACATAAACGATTCAAACGAGAAAA 25 31575999 0.951748212 6 22 141 0.888888889 1.380211242 0.37037037 0.08 0.148148148 25 3 0 24 3R:31575922-31576012 8 pygo FBtr0085806 31575833 31576891 ATGTGAGA 8mer-A1 dme-miR-1003-3p 3R - 31575942 31576012 3'utr pygo FlyBase G42287.1 AAGAAATTATGAATTCATGTGAGAAAGGTTAATTTGTAATTTAAGACGAATGTGGAGGACGCAGCGAACAT 13 31575999 0.973276884 3 13 84 1 1.278753601 0.263157895 0.384615385 0.578947368 13 0 0 19 3R:31575942-31576012 8 14.5 2789 FBgn0043900 862.0266667 23.10666667 35.35666667 0.016820825 0.627524524 0.410106533 3 3 3 0.2 dme-miR-980-3p 8mer-A1 GGCAGCTA 3R 31576686 31576693 - 3R_31576686_31576693_- 0.668724094 0.668214108 0.668469101 0.000360624 pygo FBtr0085806 31575833 31576891 3R - 31576661 31576713 3'utr pygo FlyBase G56043.1 GACCCACCAGTCCCCATCCCGGCAGCTAAGCCCCGTAGCCAGAATGCGAACCA 16 31576698 0.835690792 5 16 35 1 1.230448921 0.058823529 0.0625 0.117647059 16 0 0 17 3R:31576661-31576713 8 pygo FBtr0085806 31575833 31576891 GGCAGCTA 8mer-A1 dme-miR-980-3p 3R - 31576672 31576709 3'utr pygo FlyBase G42290.1 CACCAGTCCCCATCCCGGCAGCTAAGCCCCGTAGCCAG 7 31576698 0.733471962 2 5 19 0.666666667 0.77815125 0 0.285714286 0.444444444 7 3 0 6 3R:31576672-31576709 8 11.5 2790 FBgn0043900 862.0266667 23.10666667 35.35666667 0.013340655 0.497691864 0.325256906 5 5 5 0.2 dme-miR-1007-3p 8mer-A1 TGAGCTTA 3R 31596910 31596917 - 3R_31596910_31596917_- 0.625042156 0.62503014 0.625036148 8.56E-06 CycG FBtr0333328 31596640 31599272 3R - 31596869 31597076 3'utr CycG FlyBase G56057.2 ATTTTACATTGTATTTAGCGCGGAGTTAGTTAAATATTTGCAAGTATCAACATCAAAAACATGAATGAAAATCTCAATTATTGTATATTTAGTTTTTATTTGACGACTACTTTTATTCATGATAACAATGATGGTGGGCAATTGCCCATCGTCAAGTTTTGAGCTTATATTCGGTTGAGGTTTACACTTTAGGATTAGTTACCACACG 224 31596917 0.867040235 34 214 2256 0.957198444 2.390935107 0.089494163 0.133928571 0.245136187 224 11 0 246 3R:31596869-31597076 8 CycG FBtr0333328 31596640 31599272 TGAGCTTA 8mer-A1 dme-miR-1007-3p 3R - 31596874 31597077 3'utr CycG FlyBase G42303.1 AATTTTACATTGTATTTAGCGCGGAGTTAGTTAAATATTTGCAAGTATCAACATCAAAAACATGAATGAAAATCTCAATTATTGTATATTTAGTTTTTATTTGACGACTACTTTTATTCATGATAACAATGATGGTGGGCAATTGCCCATCGTCAAGTTTTGAGCTTATATTCGGTTGAGGTTTACACTTTAGGATTAGTTACC 133 31596917 0.779429794 29 131 1301 0.974619289 2.283301229 0.121827411 0.368421053 0.573604061 133 5 0 192 3R:31596874-31597077 8 111 2791 FBgn0039858 20619.65667 595.7166667 909.0766667 0.005383213 0.186330191 0.122101913 0 0 0 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 31597223 31597229 - 3R_31597223_31597229_- 0.651993269 0.658055213 0.655024241 0.004286411 CycG FBtr0333328 31596640 31599272 3R - 31597130 31597277 3'utr CycG FlyBase G56058.1 AGTCGAAATGCGAAACAAATAATTATATTTAAGCGACGGAGATCATCATGTGTTCGTTTAAGCTTAGTCCACTATAAATAACAGCCAATTGACGATTAGGCGATTAAGAGAAAGGTGAAAGCGGTGAAAATATGTCTAGCACTAAGTT 195 31597229 0.987348193 21 182 1601 0.944700461 1.533602611 0.235023041 0.112820513 0.202764977 195 7 5 205 3R:31597130-31597277 7 CycG FBtr0333328 31596640 31599272 TGTGTTC 7mer-m8 dme-miR-317-3p 3R - 31597127 31597351 3'utr CycG FlyBase G42304.1 CTGAACCACAGCCTGAAGATCAGTTCTGTGAAAGCTGTGAGTGAGAAAGCAGAATCCGAATACATTGTTAACACAGTCGAAATGCGAAACAAATAATTATATTTAAGCGACGGAGATCATCATGTGTTCGTTTAAGCTTAGTCCACTATAAATAACAGCCAATTGACGATTAGGCGATTAAGAGAAAGGTGAAAGCGGTGAAAATATGTCTAGCACTAAGTTTTT 154 31597229 0.975900291 31 143 1078 0.931914894 1.437354128 0.170212766 0.402597403 0.608510638 154 9 7 219 3R:31597127-31597351 7 121 2792 FBgn0039858 20619.65667 595.7166667 909.0766667 0.005868187 0.203116694 0.133102085 0 0 0 0.2 dme-miR-980-3p 6mer3-8 GGCAGC 3R 31597661 31597666 - 3R_31597661_31597666_- 0.992375633 0.992348419 0.992362026 1.92E-05 CycG FBtr0333328 31596640 31599272 3R - 31597639 31597692 3'utr CycG FlyBase G56061.1 CAGAAAACTTTTATTTAAATCCACTTGGCAGCGGAATGTGCAAACTCCTGTCTG 102 31597667 0.834565582 5 97 515 0.976190476 2.089905111 0.03968254 0.176470588 0.333333333 102 3 0 123 3R:31597639-31597692 6 CycG FBtr0333328 31596640 31599272 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 31597599 31597688 3'utr CycG FlyBase G42306.1 AAACTTTTATTTAAATCCACTTGGCAGCGGAATGTGCAAACTCCTGTCTGTAAATTTGAATAAAATGCGTTTGCCCCGCCAAAGGGGCAT 90 31597667 0.949070601 6 88 402 0.993055556 1.854306042 0.020833333 0.444444444 0.652777778 90 0 1 143 3R:31597599-31597688 6 90.5 2793 FBgn0039858 20619.65667 595.7166667 909.0766667 0.004389016 0.151917858 0.09955156 1 1 1 0.2 dme-miR-1012-3p 8mer-A1 TTGACTAA 3R 31598272 31598279 - 3R_31598272_31598279_- 0.626899505 0.62693628 0.626917892 2.60E-05 CycG FBtr0333328 31596640 31599272 3R - 31598186 31598309 3'utr CycG FlyBase G56063.1 AGAAAACTAAAGTATAATTCGCCGCCTGTATTGACTAAGAACTCTTAACAATAATATAATAACTTTAAACAAGGTACAATATGTAGTGTGTGTCTAGTAGATTTTTCTCTGTATAACAAAATCA 40 31598282 0.980977245 13 37 274 0.942307692 1.69019608 0.057692308 0.25 0.423076923 40 3 0 49 3R:31598186-31598309 8 CycG FBtr0333328 31596640 31599272 TTGACTAA 8mer-A1 dme-miR-1012-3p 3R - 31598253 31598323 3'utr CycG FlyBase G42309.1 ACGAGAAAGCCCATAGAAAACTAAAGTATAATTCGCCGCCTGTATTGACTAAGAACTCTTAACAATAATAT 35 31598282 0.999737317 10 32 186 0.941176471 1.681241237 0.098039216 0.382352941 0.588235294 34 3 0 48 3R:31598253-31598323 8 21.5 2794 FBgn0039858 20619.65667 595.7166667 909.0766667 0.001042694 0.036090983 0.023650371 3 3 3 0.2 dme-miR-980-3p 8mer-A1 GGCAGCTA 3R 31614950 31614957 + 3R_31614950_31614957_+ 0.648629044 0.659713298 0.654171171 0.007837784 Med FBtr0085815|FBtr0085816|FBtr0337030 31614900|31614900|31614900 31615200|31615200|31615375 3R + 31614865 31614990 stop_codon Med FlyBase G47426.1 CGCCATGCCGATCGATGGCCCGCGTGCCGCCGCCTAATCCGTATTTATTATTGGCCCACATCTATGCTAAGGACTCAGTTTTAGCGGCAGCTATCCGTCAGCTATTTGCGGATTTTGTGTTTTTCA 52 31614945 0.986976867 22 47 404 0.901639344 1.263241435 0.31147541 0.173076923 0.295081967 52 4 2 55 3R:31614865-31614990 8 Med FBtr0337030|FBtr0085815|FBtr0085816 31614900|31614900|31614900 31615375|31615200|31615200 GGCAGCTA 8mer-A1 dme-miR-980-3p 3R + 31614887 31614980 stop_codon Med FlyBase G35778.1 CGTGCCGCCGCCTAATCCGTATTTATTATTGGCCCACATCTATGCTAAGGACTCAGTTTTAGCGGCAGCTATCCGTCAGCTATTTGCGGATTTT 47 31614944 0.987822594 14 37 321 0.863013699 1.322219295 0.260273973 0.425531915 0.630136986 47 8 2 63 3R:31614887-31614980 8 36 2795 FBgn0011655 590.06 20.83333333 31.85 0.061010745 1.728 1.130298273 5 6 5.5 0.2 dme-miR-980-3p 6mer2-7 GCAGCT 3R 31615080 31615085 + 3R_31615080_31615085_+ 0.994784878 0.992905079 0.993844979 0.001329219 Med FBtr0085815|FBtr0085816|FBtr0337030 31614900|31614900|31614900 31615200|31615200|31615375 3R + 31615047 31615100 3'utr Med FlyBase G47428.1 AAAAAATTGAAACAACTTAGAAGTCTTAAGTATGCAGCTGTAAAGCACTAAGCA 14 31615079 0.976095096 6 12 72 0.8125 0.812913357 0.1875 0.142857143 0.25 14 2 1 13 3R:31615047-31615100 6 Med FBtr0337030|FBtr0085815|FBtr0085816 31614900|31614900|31614900 31615375|31615200|31615200 GCAGCT 6mer2-7 dme-miR-980-3p 3R + 31615060 31615100 3'utr Med FlyBase G35779.1 AACTTAGAAGTCTTAAGTATGCAGCTGTAAAGCACTAAGCA 10 31615079 0.770884507 3 8 63 0.8125 1.113943352 0 0.5 0.6875 10 3 0 13 3R:31615060-31615100 6 10 2796 FBgn0011655 590.06 20.83333333 31.85 0.016947429 0.48 0.313971743 1 1 1 0.2 dme-bantam-3p 6mer3-8 TGATCT 3R 31662121 31662126 + 3R_31662121_31662126_+ 0.921599363 0.971049568 0.946324465 0.034966572 kek6 FBtr0330107|FBtr0085821 31661629|31661608 31664646|31664646 3R + 31662103 31662140 3'utr kek6 FlyBase G47438.1 AGGTATAGCGACCAAAACTGATCTTCATAAGGTGTATA 10 31662121 0.908221345 2 10 50 1 1.041392685 0.454545455 0.1 0.181818182 10 0 0 11 3R:31662103-31662140 6 kek6 FBtr0330107|FBtr0085821 31661629|31661608 31664646|31664646 TGATCT 6mer3-8 dme-bantam-3p 3R + 31662101 31662142 3'utr kek6 FlyBase G35786.1 TAAGGTATAGCGACCAAAACTGATCTTCATAAGGTGTATAGT 8 31662121 0.90908133 3 8 50 1 1 0.2 0.25 0.4 8 0 0 10 3R:31662101-31662142 6 9 2797 FBgn0039862 176.9033333 3.166666667 4.81 0.050875243 2.842105263 1.871101871 0 0 0 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 31676639 31676644 + 3R_31676639_31676644_+ 0.996084048 0.992001627 0.994042837 0.002886693 CG1815 FBtr0085823|FBtr0085823|FBtr0085823 31675699|31675699|31675699 31677971|31677971|31677971 3R + 31676589 31676675 3'utr CG1815 FlyBase G47457.1 GCGAATTGCATGCGTGAGGCGCAGTTGTACTGCTGTTGGAACACATCCTACTGTGACTATCCCTGCCAGCAGCTTCACTGGCCTGGA 14 31676637 0.967580579 8 13 74 1 1.204119983 0.1875 0.142857143 0.25 14 0 0 16 3R:31676589-31676675 6 CG1815 FBtr0085823|FBtr0085823|FBtr0085823 31675699|31675699|31675699 31677971|31677971|31677971 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 31676594 31676658 3'utr CG1815 FlyBase G35798.1 TTGCATGCGTGAGGCGCAGTTGTACTGCTGTTGGAACACATCCTACTGTGACTATCCCTGCCAGC 5 31676646 0.981573819 3 4 39 0.857142857 0.77815125 0.428571429 0.4 0.571428571 5 1 0 6 3R:31676594-31676658 6 4.5 2798 FBgn0039863 1117.306667 23.11666667 35.54333333 0.004027542 0.194664744 0.126606021 2 -7 -2.5 0.2 dme-miR-92b-3p 8mer-m1 GTGCAATT 3R 31730930 31730937 + 3R_31730930_31730937_+ 0.590704272 0.36082018 0.475762226 0.162552606 ttk FBtr0085826|FBtr0303228|FBtr0085828|FBtr0085830 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 3R + 31730879 31730979 3'utr ttk FlyBase G47480.1 TGGCTTCGATGGAGCTGCAGAAATCTCCAAGCCAGCAGACGTTTTTATGTTGTGCAATTTACCTTTTCAGTTACAATTACACTTATTTTCTAAACCCCCTT 26 31730944 0.904045697 10 26 215 1 1.568201724 0.081081081 0.384615385 0.567567568 26 0 0 37 3R:31730879-31730979 8 ttk FBtr0085830|FBtr0303228|FBtr0085828|FBtr0085826 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 GTGCAATT 8mer-m1 dme-miR-92b-3p 3R + 31730925 31730969 3'utr ttk FlyBase G35814.1 ATGTTGTGCAATTTACCTTTTCAGTTACAATTACACTTATTTTCT 10 31730955 0.949634349 4 10 91 1 1.079181246 0 0.1 0.25 10 0 0 12 3R:31730925-31730969 8 7.5 2799 FBgn0003870 1332.35 36.30666667 55.43333333 0.005629151 0.206573632 0.135297655 -14 -25 -19.5 0.2 dme-miR-282-5p 6mer2-7 GAGGCT 3R 31731787 31731792 + 3R_31731787_31731792_+ 0.983353001 0.999818753 0.991585877 0.011643079 ttk FBtr0085826|FBtr0303228|FBtr0085828|FBtr0085830 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 3R + 31731760 31731826 3'utr ttk FlyBase G47484.1 CTATCAAACGATTTATGTTGTATATCGGAGGCTTAAATTATCGCCAAAGAAAATGAAAATCAAAAAC 27 31731775 0.95655443 8 24 199 0.911764706 1.190331698 0.235294118 0.148148148 0.323529412 27 2 1 31 3R:31731760-31731826 6 ttk FBtr0085830|FBtr0303228|FBtr0085828|FBtr0085826 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 GAGGCT 6mer2-7 dme-miR-282-5p 3R + 31731759 31731810 3'utr ttk FlyBase G35819.1 TCTATCAAACGATTTATGTTGTATATCGGAGGCTTAAATTATCGCCAAAGAA 14 31731776 0.965029601 6 13 109 0.857142857 1.255272505 0.238095238 0.428571429 0.619047619 14 3 0 18 3R:31731759-31731810 6 18.5 2800 FBgn0003870 1332.35 36.30666667 55.43333333 0.01388524 0.509548292 0.333734215 12 11 11.5 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 31732508 31732514 + 3R_31732508_31732514_+ 0.815901182 0.820037273 0.817969228 0.002924664 ttk FBtr0085826|FBtr0303228|FBtr0085828|FBtr0085830 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 3R + 31732488 31732519 3'utr ttk FlyBase G47489.1 ATAGAGTCATGCTTTGATGCCCAAAGAAAATG 7 31732505 0.931405691 2 7 40 1 0.84509804 0.142857143 0 0 7 0 0 7 3R:31732488-31732519 7 ttk FBtr0085830|FBtr0303228|FBtr0085828|FBtr0085826 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 31732442 31732524 3'utr ttk FlyBase G35823.1 AAAAATGTCCAAACTCGAAACCTGAACGAGGAATATAGCTACATATATAGAGTCATGCTTTGATGCCCAAAGAAAATGAAAGA 12 31732505 0.925752224 6 12 43 1 1.322219295 0.19047619 0.416666667 0.666666667 12 0 0 21 3R:31732442-31732524 7 6 2801 FBgn0003870 1332.35 36.30666667 55.43333333 0.004503321 0.165258906 0.108238124 3 3 3 0.2 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 31734686 31734693 + 3R_31734686_31734693_+ 0.629934356 0.630647959 0.630291158 0.000504591 ttk FBtr0085827|FBtr0303227|FBtr0085825|FBtr0085829 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 3R + 31734595 31734703 3'utr ttk FlyBase G47492.1 AAGCAATCGTGGCACTCAAACGCAACACACCAGACTCAAAACGATTTTTAGTTAATGTAAACCCGTAAGCAATATTAATTCTAACACTTGCTCCGTCCAGAACGCCTTT 44 31734684 0.969524576 11 42 253 0.923076923 1.681241237 0.134615385 0.136363636 0.269230769 44 4 0 48 3R:31734595-31734703 8 ttk FBtr0085825|FBtr0085829|FBtr0303227|FBtr0085827 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R + 31734665 31734705 3'utr ttk FlyBase G35827.1 AATATTAATTCTAACACTTGCTCCGTCCAGAACGCCTTTTT 26 31734684 0.672753714 6 23 155 0.842105263 1.204119983 0.157894737 0.346153846 0.552631579 26 5 1 32 3R:31734665-31734705 8 31.5 2802 FBgn0003870 1332.35 36.30666667 55.43333333 0.023642436 0.867609254 0.56825015 2 2 2 0.2 dme-miR-995-5p 6mer3-8 AATTCG 3R 31734813 31734818 + 3R_31734813_31734818_+ 0.64467967 0.63249562 0.638587645 0.00861546 ttk FBtr0085827|FBtr0303227|FBtr0085825|FBtr0085829 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 3R + 31734767 31734904 3'utr ttk FlyBase G47493.1 TGAGCAGTTCAGTGAACTTTAATGACTTTCGGCTTTAATTATAAACAATTCGACTGGCCGCTTACTGGATCCGCACACGATCCGTAAGGCAAGCAACTTTAGAACTTTTCATTTCTCTTTGTGATTTTGTTAAACCTT 57 31734816 0.944035694 18 54 533 0.956521739 1.819543936 0.289855072 0.210526316 0.347826087 57 3 0 66 3R:31734767-31734904 6 ttk FBtr0085825|FBtr0085829|FBtr0303227|FBtr0085827 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 AATTCG 6mer3-8 dme-miR-995-5p 3R + 31734764 31734841 3'utr ttk FlyBase G35828.1 AATTGAGCAGTTCAGTGAACTTTAATGACTTTCGGCTTTAATTATAAACAATTCGACTGGCCGCTTACTGGATCCGCA 25 31734816 0.980015146 11 23 162 0.951219512 1.591064607 0.097560976 0.48 0.682926829 25 2 0 39 3R:31734764-31734841 6 15.5 2803 FBgn0003870 1332.35 36.30666667 55.43333333 0.01163358 0.42691884 0.279615153 -3 -3 -3 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3R 31734886 31734892 + 3R_31734886_31734892_+ 0.515266976 0.521222437 0.518244707 0.004211104 ttk FBtr0085827|FBtr0303227|FBtr0085825|FBtr0085829 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 3R + 31734767 31734904 3'utr ttk FlyBase G47493.1 TGAGCAGTTCAGTGAACTTTAATGACTTTCGGCTTTAATTATAAACAATTCGACTGGCCGCTTACTGGATCCGCACACGATCCGTAAGGCAAGCAACTTTAGAACTTTTCATTTCTCTTTGTGATTTTGTTAAACCTT 57 31734892 0.944035694 18 54 533 0.956521739 1.819543936 0.289855072 0.210526316 0.347826087 57 3 0 66 3R:31734767-31734904 7 ttk FBtr0085825|FBtr0085829|FBtr0303227|FBtr0085827 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 31734873 31734901 3'utr ttk FlyBase G35829.1 TTTCATTTCTCTTTGTGATTTTGTTAAAC 13 31734892 0.61239851 6 13 166 1 1.204119983 0.25 0.230769231 0.375 13 0 0 16 3R:31734873-31734901 7 16.5 2804 FBgn0003870 1332.35 36.30666667 55.43333333 0.012384133 0.45446199 0.297654841 -6 -6 -6 0.2 dme-miR-14-3p 6mer3-8 AAGACT 3R 31735290 31735295 + 3R_31735290_31735295_+ 0.999897374 0.999992709 0.999945042 6.74E-05 ttk FBtr0085827|FBtr0303227|FBtr0085825|FBtr0085829 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 3R + 31735271 31735310 3'utr ttk FlyBase G47496.1 AACGCAACAAATACGACTTAAGACTTGTGCGCTCAATGAC 15 31735298 0.948357808 6 14 71 0.954545455 1.322219295 0.090909091 0.266666667 0.5 15 1 0 21 3R:31735271-31735310 6 ttk FBtr0085825|FBtr0085829|FBtr0303227|FBtr0085827 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 AAGACT 6mer3-8 dme-miR-14-3p 3R + 31735253 31735314 3'utr ttk FlyBase G35831.1 GATTTTTACAGTTTACTTAACGCAACAAATACGACTTAAGACTTGTGCGCTCAATGACTAGA 15 31735297 0.972504993 6 13 67 0.947368421 1.255272505 0.157894737 0.214285714 0.421052632 14 1 0 18 3R:31735253-31735314 6 13.5 2805 FBgn0003870 1332.35 36.30666667 55.43333333 0.010132473 0.371832538 0.243535779 -8 -7 -7.5 0.2 dme-miR-278-3p 8mer-A1 CCCACCGA 3R 31750719 31750726 + 3R_31750719_31750726_+ 0.678004638 0.633719232 0.655861935 0.031314507 CG1910 FBtr0085840|FBtr0085839|FBtr0085841 31750711|31750711|31750711 31751894|31751894|31751894 3R + 31750699 31750755 stop_codon CG1910 FlyBase G47529.1 AAGTGTGTAACTAAACCAATCCCACCGATGGACAATCAACAACTTTAATGCGTTGCA 37 31750727 0.748846817 7 34 139 0.926829268 1.102662342 0.243902439 0.108108108 0.195121951 37 1 2 38 3R:31750699-31750755 8 CG1910 FBtr0085841|FBtr0085840|FBtr0085839 31750711|31750711|31750711 31751894|31751894|31751894 CCCACCGA 8mer-A1 dme-miR-278-3p 3R + 31750700 31750743 stop_codon CG1910 FlyBase G35853.2 AGTGTGTAACTAAACCAATCCCACCGATGGACAATCAACAACTT 19 31750718 0.842783658 4 18 48 1 1.505149978 0.15625 0.473684211 0.6875 19 0 0 32 3R:31750700-31750743 8 25.5 2806 FBgn0022349 2973.373333 120.6666667 184.89 0.008576118 0.211325967 0.137919844 -8 1 -3.5 0.2 dme-bantam-3p 7mer-m8 TGATCTC 3R 31799548 31799554 + 3R_31799548_31799554_+ 0.394319861 0.40685097 0.400585416 0.008860826 Acf1 FBtr0085845 31799537 31799799 3R + 31799516 31799578 stop_codon Acf1 FlyBase G47617.1 ACGGGGAAGTCAAAGCTTGCTGAGCCGGACGCTGATCTCCACCAGCTATCGTGTAAATTAGTT 59 31799548 0.898505178 6 59 247 1 1.86923172 0.135135135 0.186440678 0.351351351 59 0 0 74 3R:31799516-31799578 7 Acf1 FBtr0085845 31799537 31799799 TGATCTC 7mer-m8 dme-bantam-3p 3R + 31799511 31799568 stop_codon Acf1 FlyBase G35921.1 TATGAACGGGGAAGTCAAAGCTTGCTGAGCCGGACGCTGATCTCCACCAGCTATCGTG 31 31799548 0.942977895 4 28 114 0.909090909 1.301029996 0.159090909 0.258064516 0.477272727 31 3 1 40 3R:31799511-31799568 7 41 2807 FBgn0027620 2508.1 60.07666667 92.65666667 0.016347036 0.682461299 0.442493794 0 0 0 0.2 dme-miR-980-3p 6mer3-8 GGCAGC 3R 31851752 31851757 - 3R_31851752_31851757_- 0.991497667 0.992450859 0.991974263 0.000674014 heph FBtr0300267|FBtr0300268|FBtr0300266|FBtr0346192|FBtr0300269|FBtr0300265|FBtr0085880|FBtr0112864|FBtr0085888|FBtr0112866|FBtr0085881|FBtr0085884|FBtr0085883|FBtr0112865|FBtr0085887|FBtr0085878|FBtr0300270|FBtr0085879|FBtr0300263|FBtr0300264|FBtr0306692|FBtr0085885|FBtr0085886|FBtr0306693|FBtr0085882 31851018|31851018|31851018|31851482|31846985|31851482|31851018|31850247|31851018|31846985|31850980|31851018|31851018|31851482|31851018|31851482|31851482|31851018|31850980|31851482|31851018|31851018|31851018|31851018|31851018 31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854 3R - 31851709 31851778 5'utr heph FlyBase G56121.1 AGCAACACCTTCAGATCCATTGGCAGCAACAAATACAAACTATAATCCGTAGTACAAGAAAAATGCACGC 58 31851758 0.931350159 3 56 207 0.971014493 1.525044807 0.043478261 0.172413793 0.304347826 58 1 1 67 3R:31851709-31851778 6 heph FBtr0085882|FBtr0085883|FBtr0306693|FBtr0300270|FBtr0085885|FBtr0306692|FBtr0300264|FBtr0300263|FBtr0085879|FBtr0085878|FBtr0085887|FBtr0085886|FBtr0112865|FBtr0085884|FBtr0300267|FBtr0085881|FBtr0112864|FBtr0300266|FBtr0300269|FBtr0085880|FBtr0346192|FBtr0300265|FBtr0112866|FBtr0085888|FBtr0300268 31851018|31851018|31851018|31851482|31851018|31851018|31851482|31850980|31851018|31851482|31851018|31851018|31851482|31851018|31851018|31850980|31850247|31851018|31846985|31851018|31851482|31851482|31846985|31851018|31851018 31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 31851740 31851777 5'utr heph FlyBase G42363.1 GCAACACCTTCAGATCCATTGGCAGCAACAAATACAAA 32 31851758 0.771111603 3 31 101 0.943396226 1.698970004 0.018867925 0.46875 0.679245283 32 3 0 50 3R:31851740-31851777 6 44 2808 FBgn0011224 1726 50.21 76.84333333 0.025492468 0.876319458 0.572593589 1 1 1 0.2 dme-miR-8-3p 7mer-m8 CAGTATT 3R 32045473 32045479 - 3R_32045473_32045479_- 0.635699902 0.655219673 0.645459788 0.013802583 krz FBtr0085877 32045312 32049027 3R - 32045450 32045499 3'utr krz FlyBase G56126.1 TTTAATTTTTATATATTTGTCAGTATTGTTGCACCTCTTAGGTAGTAATT 20 32045481 0.782789772 5 18 244 0.904761905 1.278753601 0 0.05 0.095238095 20 2 0 19 3R:32045450-32045499 7 krz FBtr0085877 32045312 32049027 CAGTATT 7mer-m8 dme-miR-8-3p 3R - 32045449 32045496 3'utr krz FlyBase G42366.1 AATTTTTATATATTTGTCAGTATTGTTGCACCTCTTAGGTAGTAATTA 20 32045482 0.750792569 6 18 256 0.911764706 1.491361694 0 0.45 0.676470588 20 3 0 31 3R:32045449-32045496 7 19.5 2809 FBgn0040206 850.0433333 33.93333333 51.95666667 0.022940007 0.574656189 0.375312761 2 3 2.5 0.2 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3R 32046205 32046210 - 3R_32046205_32046210_- 0.502011281 0.516130627 0.509070954 0.009983853 krz FBtr0085877 32045312 32049027 3R - 32046186 32046226 3'utr krz FlyBase G56128.1 ATGGAGAAAGAACATTTTTGACTGACACGTTGGAGCTCCAT 9 32046210 0.646443106 4 9 64 1 1 0.1 0.111111111 0.2 9 0 0 10 3R:32046186-32046226 6 krz FBtr0085877 32045312 32049027 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3R - 32046108 32046229 3'utr krz FlyBase G42367.1 AATATGGAGAAAGAACATTTTTGACTGACACGTTGGAGCTCCATAAGAGAGGAAAAAAGAGTGGACTTTTGGAAAAGACTATGTTTGAAAAGCTTTAATATTGTATAATTAACAATGCATTG 20 32046210 0.961309543 11 19 151 0.964285714 1.431363764 0.285714286 0.3 0.5 20 1 0 27 3R:32046108-32046229 6 9.5 2810 FBgn0040206 850.0433333 33.93333333 51.95666667 0.011175901 0.279960707 0.182844678 0 0 0 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3R 32046688 32046694 - 3R_32046688_32046694_- 0.516444778 0.418228185 0.467336481 0.069449624 krz FBtr0085877 32045312 32049027 3R - 32046662 32046728 3'utr krz FlyBase G56130.1 ACTGTGAGTTACATGTTCTTATTTGTTAAAATGGTGTGATTTTTAAGAAGCTAAGATAACTTTTAAG 16 32046688 0.990882122 6 16 162 1 1.278753601 0.263157895 0.1875 0.315789474 16 0 0 19 3R:32046662-32046728 7 krz FBtr0085877 32045312 32049027 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 32046636 32046749 3'utr krz FlyBase G42368.1 TATGAGCAACATCACTTTTGTACTGTGAGTTACATGTTCTTATTTGTTAAAATGGTGTGATTTTTAAGAAGCTAAGATAACTTTTAAGATAAGTTGTAATGGTTTTGATAATAC 23 32046687 0.98952881 13 22 213 0.971428571 1.531478917 0.342857143 0.391304348 0.6 23 1 0 34 3R:32046636-32046749 7 14 2811 FBgn0040206 850.0433333 33.93333333 51.95666667 0.016469749 0.412573674 0.269455315 -6 -7 -6.5 0.2 dme-miR-184-3p 6mer3-8 TCCGTC 3R 32048094 32048099 - 3R_32048094_32048099_- 0.989119019 0.998540845 0.993829932 0.006662219 krz FBtr0085877 32045312 32049027 3R - 32048080 32048116 3'utr krz FlyBase G56135.1 AAGTCGATCTGACCATTTCCGTCTGTCTGTATAAACG 8 32048100 0.757744421 2 8 59 1 1.079181246 0.083333333 0.375 0.583333333 8 0 0 12 3R:32048080-32048116 6 krz FBtr0085877 32045312 32049027 TCCGTC 6mer3-8 dme-miR-184-3p 3R - 32048088 32048109 3'utr krz FlyBase G42371.1 TCTGACCATTTCCGTCTGTCTG 6 32048100 0.696338536 2 6 44 1 0.954242509 0.111111111 0.5 0.666666667 6 0 0 9 3R:32048088-32048109 6 6.5 2812 FBgn0040206 850.0433333 33.93333333 51.95666667 0.007646669 0.191552063 0.125104254 1 1 1 0.2 dme-bantam-3p 6mer3-8 TGATCT 3R 32048592 32048597 - 3R_32048592_32048597_- 0.784987185 0.909881658 0.847434422 0.088313748 krz FBtr0085877 32045312 32049027 3R - 32048575 32048614 3'utr krz FlyBase G56136.1 TCATTTACAAATTCTAATGATCTTTTTATTATGCCTCTTC 28 32048597 0.819447854 2 28 300 1 1.568201724 0 0.285714286 0.459459459 28 0 0 37 3R:32048575-32048614 6 krz FBtr0085877 32045312 32049027 TGATCT 6mer3-8 dme-bantam-3p 3R - 32048575 32048610 3'utr krz FlyBase G42372.1 TTACAAATTCTAATGATCTTTTTATTATGCCTCTTC 29 32048597 0.793438864 4 27 294 0.944444444 1.531478917 0 0.172413793 0.333333333 29 2 0 34 3R:32048575-32048610 6 28.5 2813 FBgn0040206 850.0433333 33.93333333 51.95666667 0.033527703 0.839882122 0.548534035 0 0 0 0.2 dme-miR-14-3p 8mer-A1 AAGACTGA 3R 4241694 4241701 - 3R_4241694_4241701_- 0.642250048 0.640834247 0.641542147 0.001001122 CG14642 FBtr0089688 4241043 4241883 3R - 4241688 4241712 5'utr CG14642 FlyBase G47748.1 CACGATTCTCTAAGACTGACGGAAT 7 4241704 0.610135787 3 7 29 1 1.041392685 0.636363636 0.285714286 0.545454545 7 0 0 11 3R:4241688-4241712 8 CG14642 FBtr0089688 4241043 4241883 AAGACTGA 8mer-A1 dme-miR-14-3p 3R - 4241663 4241714 5'utr CG14642 FlyBase G36027.1 AACACGATTCTCTAAGACTGACGGAATACGTTAGACCTGTCCGCCTGTGGGT 11 4241703 0.965671453 5 9 47 0.909090909 1 0.181818182 0.1 0.181818182 10 1 0 10 3R:4241663-4241714 8 8.5 2814 FBgn0037222 149 13.89666667 21.19333333 0.05704698 0.611657472 0.401069519 3 2 2.5 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 3R 4309916 4309921 - 3R_4309916_4309921_- 0.971370759 0.974285778 0.972828269 0.002061216 Vps24 FBtr0078958 4309645 4309972 3R - 4309900 4310158 stop_codon Vps24 FlyBase G47755.1 AAGGAGGTGGACAAGGTTTTGTGGGAGATCACAGATGGCAAGCTCGGGGAAGCTCCCCTGCCTCCAGAGGCTACACCGGCGGACAAGGCGTCTGCGTCTGCTGCGCGCGTCGAGGCTGAGCAGGACGATGAGGAGGGTGAGGAACTGCAAGAGATGCAAAGCCGCCTGGCCTCGCTGCGATCTTAAAACAACTGCTATGGGTATTTTATTTAGATTTGAAATTAAAGGCAAGTGATTTTGACTGGCAGACCTTATCAAA 70 4309922 0.927576483 28 68 373 0.962025316 1.278753601 0.265822785 0.128571429 0.227848101 70 0 3 76 3R:4309900-4310158 6 Vps24 FBtr0078958 4309645 4309972 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 4309902 4309948 3'utr Vps24 FlyBase G36030.1 TAGATTTGAAATTAAAGGCAAGTGATTTTGACTGGCAGACCTTATCA 27 4309922 0.602196842 7 25 171 1 1.568201724 0.081081081 0.307692308 0.513513514 26 0 0 37 3R:4309902-4309948 6 27 2815 FBgn0037231 389.0533333 43.63 67.21 0.069399225 0.618840248 0.401725934 1 1 1 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 4326194 4326199 + 3R_4326194_4326199_+ 0.521933332 0.501052691 0.511493012 0.014764814 CG9795 FBtr0100617 4325834 4326379 3R + 4326176 4326255 3'utr CG9795 FlyBase G39927.1 GATTAACTAAGAAAACCTGTACCTATCGAAATGAACAAAAATCAAAATCTATATAGACGCAAAAAGCCTAGAATTTAAAT 119 4326193 0.925950816 5 119 426 1 2.193124598 0.153846154 0.260504202 0.435897436 119 0 0 156 3R:4326176-4326255 6 CG9795 FBtr0100617 4325834 4326379 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 4326170 4326270 3'utr CG9795 FlyBase G30160.1 GTGGATGATTAACTAAGAAAACCTGTACCTATCGAAATGAACAAAAATCAAAATCTATATAGACGCAAAAAGCCTAGAATTTAAATAATAATTAAGTAGGT 118 4326193 0.926434285 7 115 421 0.97515528 1.894869657 0.204968944 0.271186441 0.465838509 118 3 1 157 3R:4326170-4326270 6 108 2816 FBgn0037234 468.08 20.74666667 31.52333333 0.23072979 5.205655527 3.426033626 1 1 1 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 4381017 4381024 + 3R_4381017_4381024_+ 0.614543204 0.594752981 0.604648093 0.013993785 CG11739 FBtr0078916|FBtr0078914|FBtr0078915|FBtr0078913 4380946|4380946|4380946|4380946 4381210|4381210|4381210|4381210 3R + 4381004 4381072 3'utr CG11739 FlyBase G39945.1 TTATTTCCCTTCTTGCATTTATTGGCATTTTGCCTGTTGACTTCTGTTCGAAATACTCCTGATATTAGC 24 4381016 0.731158188 9 23 244 0.961538462 1.096910013 0.230769231 0.083333333 0.153846154 24 0 1 25 3R:4381004-4381072 8 CG11739 FBtr0078913|FBtr0078915|FBtr0078914|FBtr0078916 4380946|4380946|4380946|4380946 4381210|4381210|4381210|4381210 TGCATTTA 8mer-A1 dme-miR-277-3p 3R + 4380995 4381078 3'utr CG11739 FlyBase G30171.1 AGCAACTATTTATTTCCCTTCTTGCATTTATTGGCATTTTGCCTGTTGACTTCTGTTCGAAATACTCCTGATATTAGCCTGACC 17 4381016 0.995153955 4 14 189 0.857142857 1.380211242 0.107142857 0.411764706 0.642857143 17 4 0 24 3R:4380995-4381078 8 15.5 2817 FBgn0037239 393.3433333 36.01 54.94333333 0.039405778 0.43043599 0.282108839 1 1 1 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 4389455 4389461 + 3R_4389455_4389461_+ 0.657238962 0.657480876 0.657359919 0.000171049 tub FBtr0302338 4389383 4389813 3R + 4389432 4389478 3'utr tub FlyBase G39971.2 ATGCAACCCAGATGTATTCATTTGGCAGCTGGGTGTGGACCTTCTTA 321 4389454 0.790789293 8 314 2679 0.980769231 2.552668216 0.271978022 0.118380062 0.222527473 321 7 0 357 3R:4389432-4389478 7 tub FBtr0302338 4389383 4389813 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 4389382 4389496 stop_codon tub FlyBase G30187.1 TAGATAAAAGCACCGACCATCGGCGGAGATGACATTCCGTTCGATAACTTATGCAACCCAGATGTATTCATTTGGCAGCTGGGTGTGGACCTTCTTATGTTATGCATGAGGTCCA 242 4389453 0.986216904 15 234 1977 0.972826087 2.076761772 0.320652174 0.400826446 0.605978261 242 8 2 358 3R:4389382-4389496 7 274 2818 FBgn0003882 635 38.28 58.43666667 0.431496063 7.157784744 4.688836917 1 2 1.5 0.2 dme-miR-304-5p 7mer-A1 GAGATTA 3R 4391721 4391727 + 3R_4391721_4391727_+ 0.821469448 0.822319471 0.82189446 0.000601111 CG14646 FBtr0078919|FBtr0302339 4391706|4391706 4392111|4391999 3R + 4391686 4391793 stop_codon CG14646 FlyBase G39980.2 AGATACTAATGACACCACGTGATTTATGACTGTTAGAGATTAAAGGACTCTTAAATCGAACCTGGTTCTTTATTGGTCTTATTTAAGTGTAATCATTTTCAATACAGT 387 4391718 0.985353884 12 377 3097 0.971800434 1.95230801 0.444685466 0.162790698 0.297180043 387 9 4 448 3R:4391686-4391793 7 CG14646 FBtr0302339|FBtr0078919 4391706|4391706 4391999|4392111 GAGATTA 7mer-A1 dme-miR-304-5p 3R + 4391686 4391779 stop_codon CG14646 FlyBase G30192.1 AGATACTAATGACACCACGTGATTTATGACTGTTAGAGATTAAAGGACTCTTAAATCGAACCTGGTTCTTTATTGGTCTTATTTAAGTGTAATC 340 4391718 0.726478229 16 329 2643 0.976608187 2.222716471 0.442495127 0.361764706 0.576998051 340 10 2 501 3R:4391686-4391779 7 310.5 2819 FBgn0037241 543.83 41.31666667 62.96 0.570950481 7.515127067 4.931702668 3 3 3 0.2 dme-miR-305-5p 8mer-m1 AGTACAAT 3R 4391906 4391913 + 3R_4391906_4391913_+ 0.52822814 0.493722639 0.510975389 0.024399073 CG14646 FBtr0078919|FBtr0302339 4391706|4391706 4392111|4391999 3R + 4391853 4391997 3'utr CG14646 FlyBase G39981.1 CACTTTTTAATACTTTAACAATCTAAGCAATCCTAATATTTTTATTTTACTTAAGTACAATTGATCTAAGCATAGACAGAAAGAGTGTTCATATGAGAAATATGCCTTAATATGCTCTGCATAGGAAACCTGTAGTGCAATAAGT 66 4391914 0.979407576 17 66 464 1 1.886490725 0.311688312 0.151515152 0.272727273 66 0 0 77 3R:4391853-4391997 8 CG14646 FBtr0302339|FBtr0078919 4391706|4391706 4391999|4392111 AGTACAAT 8mer-m1 dme-miR-305-5p 3R + 4391896 4391977 3'utr CG14646 FlyBase G30193.1 ATTTTACTTAAGTACAATTGATCTAAGCATAGACAGAAAGAGTGTTCATATGAGAAATATGCCTTAATATGCTCTGCATAGG 29 4391914 0.822069698 10 29 176 1 1.681241237 0.229166667 0.586206897 0.75 29 0 0 48 3R:4391896-4391977 8 20.5 2820 FBgn0037241 543.83 41.31666667 62.96 0.037695603 0.49616781 0.325603558 -8 -8 -8 0.2 dme-miR-31a-5p 6mer3-8 TCTTGC 3R 4396297 4396302 - 3R_4396297_4396302_- 0.999479156 0.448066465 0.723772811 0.389907659 CG9855 FBtr0339552|FBtr0078950 4395977|4396162 4396375|4396375 3R - 4396269 4396308 3'utr CG9855 FlyBase G47790.1 TTTACCTCTTGCACTTTCAAGACGCTCACATCACCACCTA 6 4396298 0.880053025 3 5 36 0.833333333 0.698970004 0.166666667 0 0 6 1 0 5 3R:4396269-4396308 6 CG9855 FBtr0339552|FBtr0078950 4395977|4396162 4396375|4396375 TCTTGC 6mer3-8 dme-miR-31a-5p 3R - 4396229 4396336 3'utr CG9855 FlyBase G36053.1 GAGTTATGGTTTGTTTTAAGTTAATTGTTTTACCTCTTGCACTTTCAAGACGCTCACATCACCACCTAATTTAGGTGGACAAAAATTTTTAATTGTCTGCAGATAACA 11 4396299 0.985564542 7 11 93 1 1.176091259 0.2 0.363636364 0.533333333 11 0 0 15 3R:4396229-4396336 6 4 2821 FBgn0037242 314.87 22.8 34.92 0.012703655 0.175438596 0.114547537 -4 -3 -3.5 0.2 dme-miR-965-3p 6mer2-7 ACGCTT 3R 4406576 4406581 + 3R_4406576_4406581_+ 0.567981856 0.558896848 0.563439352 0.006424136 lost FBtr0078921 4406254 4407182 3R + 4406556 4406604 3'utr lost FlyBase G40000.1 AACGAGAACACAAATCATTGACGCTTTTTCTAAACAATTGCATTTGTTT 19 4406574 0.986775884 5 18 154 0.958333333 1.361727836 0 0.210526316 0.375 19 1 0 23 3R:4406556-4406604 6 lost FBtr0078921 4406254 4407182 ACGCTT 6mer2-7 dme-miR-965-3p 3R + 4406558 4406605 3'utr lost FlyBase G30215.1 CGAGAACACAAATCATTGACGCTTTTTCTAAACAATTGCATTTGTTTT 18 4406574 0.941683695 7 16 153 0.888888889 1.380211242 0 0.388888889 0.592592593 18 3 0 24 3R:4406558-4406605 6 15 2822 FBgn0263594 9369.39 424.1766667 652.24 0.001600958 0.035362624 0.02299767 2 2 2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 4423176 4423182 - 3R_4423176_4423182_- 0.69130232 0.667914275 0.679608297 0.016537813 srl FBtr0301244|FBtr0301244|FBtr0301244|FBtr0078946|FBtr0078946|FBtr0078946|FBtr0336458|FBtr0336458|FBtr0336458 4422886|4422886|4422886|4422481|4422481|4422481|4422886|4422886|4422886 4423464|4423464|4423464|4423464|4423464|4423464|4423464|4423464|4423464 3R - 4423135 4423300 3'utr srl FlyBase G47814.1 CTTAAAATAGTTGACAGAGCTATACAATGCAAGCAATAAAAACATTGCAATGTACATTAGGATAATTGTAATTACCGTGAAGGAAACCTAACAACAAGAATTGAAAAGAAAATGAAATTGTGATAACCGCGTAATGCATACAAAGTCATTTAAAGCACGTAAGTTA 223 4423183 0.960075895 21 210 1122 0.945525292 1.431363764 0.186770428 0.139013453 0.252918288 223 6 8 243 3R:4423135-4423300 7 srl FBtr0336458|FBtr0336458|FBtr0336458|FBtr0301244|FBtr0301244|FBtr0301244|FBtr0078946|FBtr0078946|FBtr0078946 4422886|4422886|4422886|4422886|4422886|4422886|4422481|4422481|4422481 4423464|4423464|4423464|4423464|4423464|4423464|4423464|4423464|4423464 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 4423154 4423357 3'utr srl FlyBase G36072.1 AATTTCCGAAGTCTCTATCTATAAACCTGAGAAGCCTGATTACAATTCTTAATTTATCTTAAAATAGTTGACAGAGCTATACAATGCAAGCAATAAAAACATTGCAATGTACATTAGGATAATTGTAATTACCGTGAAGGAAACCTAACAACAAGAATTGAAAAGAAAATGAAATTGTGATAACCGCGTAATGCATACAAAGTC 169 4423183 0.829477446 19 157 848 0.95 1.915575699 0.157692308 0.426035503 0.626923077 169 11 2 247 3R:4423154-4423357 7 136.5 2823 FBgn0037248 2796.273333 78.52666667 121.16 0.04881497 1.73826301 1.126609442 1 1 1 0.2 dme-miR-79-3p 6mer2-7 AGCTTT 3R 4465433 4465438 - 3R_4465433_4465438_- 0.900122607 0.916761277 0.908441942 0.011765338 CG31523 FBtr0078938|FBtr0078935|FBtr0335430|FBtr0335429|FBtr0078937|FBtr0345142|FBtr0078936 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 3R - 4465419 4465571 3'utr CG31523 FlyBase G47867.1 TCAGCGCAGTGAGAAGTATTGGTGACAAATTATTTGTAAGTGTAATTCTGTCTGTTAATCCGTGCGTATGGTTTCGTTGTTAGATTATGTGGCTTAAGCTGACAAGTTCAAAAACTATAGAAAACCTAAATAAAGCTTTTTAATTTATATTAA 58 4465432 0.984281754 19 56 448 0.970588235 1.819543936 0.205882353 0.155172414 0.279411765 58 2 0 66 3R:4465419-4465571 6 CG31523 FBtr0335429|FBtr0335430|FBtr0078935|FBtr0078938|FBtr0078936|FBtr0345142|FBtr0078937 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 AGCTTT 6mer2-7 dme-miR-79-3p 3R - 4465418 4465571 3'utr CG31523 FlyBase G36112.1 TCAGCGCAGTGAGAAGTATTGGTGACAAATTATTTGTAAGTGTAATTCTGTCTGTTAATCCGTGCGTATGGTTTCGTTGTTAGATTATGTGGCTTAAGCTGACAAGTTCAAAAACTATAGAAAACCTAAATAAAGCTTTTTAATTTATATTAAA 39 4465432 0.987187196 17 35 313 0.951612903 1.469822016 0.193548387 0.384615385 0.612903226 39 2 1 59 3R:4465418-4465571 6 16.5 2824 FBgn0051523 3326.983333 148.2633333 227.5733333 0.004959448 0.111288473 0.072504101 -6 -6 -6 0.2 dme-miR-79-3p 6mer2-7 AGCTTT 3R 4465781 4465786 - 3R_4465781_4465786_- 0.999700197 0.750912683 0.87530644 0.175919328 CG31523 FBtr0078938|FBtr0078935|FBtr0335430|FBtr0335429|FBtr0078937|FBtr0345142|FBtr0078936 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 3R - 4465750 4465802 3'utr CG31523 FlyBase G47868.1 AAGATCATGGAGATAAAGCTTTTATACTGTAAGTGCAAACCGGCTTAAGGACG 8 4465781 0.982255773 5 8 62 1 0.903089987 0.25 0 0 8 0 0 8 3R:4465750-4465802 6 CG31523 FBtr0335429|FBtr0335430|FBtr0078935|FBtr0078938|FBtr0078936|FBtr0345142|FBtr0078937 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 AGCTTT 6mer2-7 dme-miR-79-3p 3R - 4465745 4465812 3'utr CG31523 FlyBase G36113.1 AAGAGTGACAAAGATCATGGAGATAAAGCTTTTATACTGTAAGTGCAAACCGGCTTAAGGACGAAGAC 8 4465773 0.974210484 6 7 46 0.9 0.954242509 0.2 0.25 0.4 8 1 0 9 3R:4465745-4465812 6 6 2825 FBgn0051523 3326.983333 148.2633333 227.5733333 0.001803436 0.040468536 0.026365128 -5 -13 -9 0.2 dme-miR-92b-3p 7mer-A1 TGCAATA 3R 4465969 4465975 - 3R_4465969_4465975_- 0.780374544 0.719559762 0.749967153 0.043002487 CG31523 FBtr0078938|FBtr0078935|FBtr0335430|FBtr0335429|FBtr0078937|FBtr0345142|FBtr0078936 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 3R - 4465947 4466000 3'utr CG31523 FlyBase G47870.1 ATATTGAGAGAGAACGGCATTTTGTTGCAATACTTTGTAAAGGTCTAATAGTTA 14 4465979 0.985731281 7 13 105 0.9375 1.176091259 0.1875 0.071428571 0.1875 14 1 0 15 3R:4465947-4466000 7 CG31523 FBtr0335429|FBtr0335430|FBtr0078935|FBtr0078938|FBtr0078936|FBtr0345142|FBtr0078937 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 TGCAATA 7mer-A1 dme-miR-92b-3p 3R - 4465958 4466004 3'utr CG31523 FlyBase G36115.1 TTGTATATTGAGAGAGAACGGCATTTTGTTGCAATACTTTGTAAAGG 5 4465980 0.966410597 3 5 33 1 0.84509804 0 0.2 0.428571429 5 0 0 7 3R:4465958-4466004 7 6.5 2826 FBgn0051523 3326.983333 148.2633333 227.5733333 0.001953722 0.043840914 0.028562222 4 5 4.5 0.2 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA 3R 4466612 4466619 - 3R_4466612_4466619_- 0.591169027 0.597191184 0.594180106 0.004258338 CG31523 FBtr0078938|FBtr0078935|FBtr0335430|FBtr0335429|FBtr0078937|FBtr0345142|FBtr0078936 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 3R - 4466553 4466817 stop_codon CG31523 FlyBase G47873.1 AAGCAAGGGGCAATCGAATGGTGCCTACAAGGAGGGCTTCTTCAAGGAGGGCGTGTTATCCAACAACGATGCCATCTTCAACCCGGACAGCAGTAGTTCTAGTCTGCACCAGCGCAAAGTCAAATAACTGCTGATTAGGTGTACTACGATGATATTCATTATGTTTATGTTAAGTGATTAGCGTGTAACTGAACCAGATTGAAGAACAAGACGAGCAAGAAACTTGGCAGAAGTAGCAGAAGACGATTGGCACGACAGCAGCGAA 410 4466619 0.96314446 35 384 1963 0.936440678 1.800324229 0.177966102 0.136585366 0.25 410 24 6 442 3R:4466553-4466817 8 CG31523 FBtr0335429|FBtr0335430|FBtr0078935|FBtr0078938|FBtr0078936|FBtr0345142|FBtr0078937 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p 3R - 4466554 4466756 stop_codon CG31523 FlyBase G36118.1 AACAACGATGCCATCTTCAACCCGGACAGCAGTAGTTCTAGTCTGCACCAGCGCAAAGTCAAATAACTGCTGATTAGGTGTACTACGATGATATTCATTATGTTTATGTTAAGTGATTAGCGTGTAACTGAACCAGATTGAAGAACAAGACGAGCAAGAAACTTGGCAGAAGTAGCAGAAGACGATTGGCACGACAGCAGCGA 267 4466619 0.961991588 27 239 1210 0.894484412 1.45776548 0.189448441 0.4082397 0.621103118 267 32 12 373 3R:4466554-4466756 8 96 2827 FBgn0051523 3326.983333 148.2633333 227.5733333 0.028854969 0.647496571 0.421842044 0 0 0 0.2 dme-bantam-3p 6mer3-8 TGATCT 3R 4492581 4492586 - 3R_4492581_4492586_- 0.94528853 0.975463989 0.960376259 0.021337301 CG34357 FBtr0303867|FBtr0335239 4492524|4491941 4493403|4493403 3R - 4492568 4492602 3'utr CG34357 FlyBase G47888.1 GACATGGGTAGATTGCTGATCTTAATAAAATATTA 23 4492587 0.724694815 5 22 184 0.962962963 1.113943352 0.37037037 0.173913043 0.296296296 23 0 1 26 3R:4492568-4492602 6 CG34357 FBtr0335239|FBtr0303867 4491941|4492524 4493403|4493403 TGATCT 6mer3-8 dme-bantam-3p 3R - 4492562 4492609 3'utr CG34357 FlyBase G36129.1 GGCTGACGACATGGGTAGATTGCTGATCTTAATAAAATATTATTATTT 14 4492587 0.985948719 6 13 111 0.947368421 1.255272505 0.473684211 0.285714286 0.473684211 14 1 0 18 3R:4492562-4492609 6 18.5 2828 FBgn0085386 22.73666667 0.763333333 1.17 0.813663686 24.23580786 15.81196581 1 1 1 0.2 dme-miR-8-3p 6mer3-8 CAGTAT 3R 4638351 4638356 - 3R_4638351_4638356_- 0.996256072 0.999166181 0.997711127 0.002057751 CG9775 FBtr0301297 4638008 4638430 3R - 4638310 4638388 stop_codon CG9775 FlyBase G47907.1 TTAAGCGCGAGGATCTTGACATGGAACTGGATCAGTATATGTCCACCACTAAGTCGGAGATGGACTACTTGCTGAAGTA 25 4638357 0.964787478 9 23 142 0.928571429 1.414973348 0.142857143 0.04 0.142857143 25 2 0 26 3R:4638310-4638388 6 CG9775 FBtr0301297 4638008 4638430 CAGTAT 6mer3-8 dme-miR-8-3p 3R - 4638312 4638385 3'utr CG9775 FlyBase G36142.1 AGCGCGAGGATCTTGACATGGAACTGGATCAGTATATGTCCACCACTAAGTCGGAGATGGACTACTTGCTGAAG 16 4638357 0.922163559 5 14 90 0.95 1.278753601 0.15 0.25 0.4 16 1 0 19 3R:4638312-4638385 6 13.5 2829 FBgn0037261 1038.666667 62.08666667 94.64333333 0.012997433 0.21743799 0.142640792 1 1 1 0.2 dme-miR-12-5p 6mer3-8 AATACT 3R 4644659 4644664 - 3R_4644659_4644664_- 0.995856429 0.961184459 0.978520444 0.024516736 Dip2 FBtr0078893 4644647 4644783 3R - 4644644 4644677 3'utr Dip2 FlyBase G47914.1 TACTTGGAGAATAAATACTGATAAATATTAATTA 29 4644665 0.881629115 4 27 216 0.939393939 1.491361694 0.272727273 0.137931034 0.242424242 29 2 0 31 3R:4644644-4644677 6 Dip2 FBtr0078893 4644647 4644783 AATACT 6mer3-8 dme-miR-12-5p 3R - 4644644 4644684 3'utr Dip2 FlyBase G36147.1 TTTATTATACTTGGAGAATAAATACTGATAAATATTAATTA 10 4644664 0.754319206 4 9 74 0.875 1.146128036 0.5 0.5 0.6875 10 2 0 14 3R:4644644-4644684 6 19.5 2830 FBgn0040466 185 25.7 39.05333333 0.105405405 0.758754864 0.499317173 1 0 0.5 0.2 dme-miR-980-5p 8mer-m1 GAAAAACT 3R 4786579 4786586 - 3R_4786579_4786586_- 0.607835129 0.435504649 0.521669889 0.121856065 ctrip FBtr0334903|FBtr0334902|FBtr0344029 4786282|4786282|4786282 4787826|4787826|4787826 3R - 4786548 4786721 3'utr ctrip FlyBase G47947.1 TGTATAACTTCTATTGTACTTGATGCATACGCATACGAAAGAGAACAGAATGCTGGTAATAAAAATTGATTAACATTTAAACCGAGAAGCGAAATCGATCTTACATTAAAACTAGATACAAATCTTTGCAGTACTGAAAAACTGATTACAGACATGTGGTATATATACATATAA 56 4786576 0.975718129 22 52 323 0.943661972 1.525044807 0.183098592 0.178571429 0.352112676 56 3 1 67 3R:4786548-4786721 8 ctrip FBtr0344029|FBtr0334902|FBtr0334903 4786282|4786282|4786282 4787826|4787826|4787826 GAAAAACT 8mer-m1 dme-miR-980-5p 3R - 4786545 4786602 3'utr ctrip FlyBase G36173.1 AAATCTTTGCAGTACTGAAAAACTGATTACAGACATGTGGTATATATACATATAACTT 21 4786577 0.779210138 9 20 149 0.96875 1.190331698 0 0.380952381 0.59375 21 0 1 31 3R:4786545-4786602 8 20.5 2831 FBgn0260794 5155.516667 58.3 89.56666667 0.003976323 0.351629503 0.228879792 -10 -9 -9.5 0.2 dme-miR-1008-3p 7mer-m8 AGCTGTG 3R 4786937 4786943 - 3R_4786937_4786943_- 0.522947792 0.634030023 0.578488908 0.078546977 ctrip FBtr0334903|FBtr0334902|FBtr0344029 4786282|4786282|4786282 4787826|4787826|4787826 3R - 4786923 4786998 3'utr ctrip FlyBase G47949.1 AAAACGTAATTATCTATCTTGCAAGTCTAAGAGAAAATTTAATGCAAATTTTGCAAGCTGTGTTACATAAAGAAAC 21 4786936 0.812928463 10 20 161 0.956521739 1.041392685 0 0.095238095 0.173913043 21 0 1 22 3R:4786923-4786998 7 ctrip FBtr0344029|FBtr0334902|FBtr0334903 4786282|4786282|4786282 4787826|4787826|4787826 AGCTGTG 7mer-m8 dme-miR-1008-3p 3R - 4786925 4786959 3'utr ctrip FlyBase G36177.1 TAATGCAAATTTTGCAAGCTGTGTTACATAAAGAA 9 4786936 0.668053539 5 9 70 1 1.146128036 0 0.333333333 0.571428571 9 0 0 14 3R:4786925-4786959 7 12.5 2832 FBgn0260794 5155.516667 58.3 89.56666667 0.002424587 0.214408233 0.139560849 -7 -7 -7 0.2 dme-miR-965-3p 7mer-A1 ACGCTTA 3R 4787182 4787188 - 3R_4787182_4787188_- 0.823336043 0.823313817 0.82332493 1.57E-05 ctrip FBtr0301437|FBtr0303914|FBtr0344030|FBtr0334903|FBtr0303911|FBtr0303917|FBtr0303915|FBtr0303912|FBtr0334902|FBtr0344028|FBtr0344029 4787043|4787043|4787043|4786282|4787043|4787043|4787043|4787043|4786282|4787043|4786282 4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826 3R - 4787125 4787217 3'utr ctrip FlyBase G47951.1 AATTATTTGTAAGCATACAATGTGCATAAACGCTTATTAGAAAGAAACGTGAATGAAAATACAATGAAGGGGAAACACTGAAGCATTGGAGGT 125 4787181 0.892332085 13 119 664 0.972789116 2.155336037 0.142857143 0.152 0.278911565 125 4 0 143 3R:4787125-4787217 7 ctrip FBtr0344029|FBtr0344028|FBtr0334902|FBtr0303915|FBtr0303912|FBtr0303917|FBtr0303911|FBtr0334903|FBtr0344030|FBtr0303914|FBtr0301437 4786282|4787043|4786282|4787043|4787043|4787043|4787043|4786282|4787043|4787043|4787043 4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826 ACGCTTA 7mer-A1 dme-miR-965-3p 3R - 4787126 4787207 3'utr ctrip FlyBase G36179.1 AAGCATACAATGTGCATAAACGCTTATTAGAAAGAAACGTGAATGAAAATACAATGAAGGGGAAACACTGAAGCATTGGAGG 76 4787181 0.889613743 8 71 391 0.943396226 2 0.20754717 0.355263158 0.537735849 76 6 0 100 3R:4787126-4787207 7 77.5 2833 FBgn0260794 5155.516667 58.3 89.56666667 0.015032441 1.329331046 0.865277261 -7 -7 -7 0.2 dme-miR-277-3p 6mer3-8 TGCATT 3R 4787366 4787371 - 3R_4787366_4787371_- 0.665723663 0.994382279 0.830052971 0.232396725 ctrip FBtr0301437|FBtr0303914|FBtr0344030|FBtr0334903|FBtr0303911|FBtr0303917|FBtr0303915|FBtr0303912|FBtr0334902|FBtr0344028|FBtr0344029 4787043|4787043|4787043|4786282|4787043|4787043|4787043|4787043|4786282|4787043|4786282 4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826 3R - 4787285 4787406 3'utr ctrip FlyBase G47952.1 AACGCACAAAGCGGTATATTTGTCGATTAGGGCTTTGCATTCGTTCTAGTTAAATTTGTTTAGTTTGCTTTTCCCATTCTTATTATCCTCAAGCAAATTCTAACTCATATTATTCATAATCA 27 4787363 0.989709444 9 25 251 0.96969697 1.204119983 0.212121212 0.185185185 0.333333333 27 0 1 32 3R:4787285-4787406 6 ctrip FBtr0344029|FBtr0344028|FBtr0334902|FBtr0303915|FBtr0303912|FBtr0303917|FBtr0303911|FBtr0334903|FBtr0344030|FBtr0303914|FBtr0301437 4786282|4787043|4786282|4787043|4787043|4787043|4787043|4786282|4787043|4787043|4787043 4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826 TGCATT 6mer3-8 dme-miR-277-3p 3R - 4787351 4787388 3'utr ctrip FlyBase G36180.1 TTTGTCGATTAGGGCTTTGCATTCGTTCTAGTTAAATT 13 4787363 0.685260619 5 12 106 0.944444444 1.230448921 0.166666667 0.307692308 0.5 13 1 0 17 3R:4787351-4787388 6 12.5 2834 FBgn0260794 5155.516667 58.3 89.56666667 0.002424587 0.214408233 0.139560849 -8 -8 -8 0.2 dme-miR-8-3p 7mer-A1 AGTATTA 3R 4818685 4818691 - 3R_4818685_4818691_- 0.53481683 0.705686395 0.620251612 0.120823053 CG14657 FBtr0334901|FBtr0078875|FBtr0334900 4818273|4818539|4817978 4820262|4819106|4819106 3R - 4818665 4818712 3'utr CG14657 FlyBase G48022.1 TTTAACCCTCATTGAGCAAAAAGTATTAAATGTATAAAGAAACTAGTT 12 4818701 0.987402577 5 7 77 0.583333333 0.84509804 0.166666667 0 0 12 5 0 7 3R:4818665-4818712 7 CG14657 FBtr0334900|FBtr0078875|FBtr0334901 4817978|4818539|4818273 4819106|4819106|4820262 AGTATTA 7mer-A1 dme-miR-8-3p 3R - 4818675 4818739 3'utr CG14657 FlyBase G36239.1 GATACAAAATGATATATGCAAAAGAAATTTAACCCTCATTGAGCAAAAAGTATTAAATGTATAAA 7 4818701 0.967854345 6 7 43 1 1.041392685 0.454545455 0.428571429 0.636363636 7 0 0 11 3R:4818675-4818739 7 6.5 2835 FBgn0037282 892.63 37.31666667 57.47333333 0.007281853 0.174184904 0.113095929 10 10 10 0.2 dme-miR-14-3p 8mer-A1 AAGACTGA 3R 4818773 4818780 - 3R_4818773_4818780_- 0.638398442 0.637129391 0.637763917 0.000897319 CG14657 FBtr0334901|FBtr0078875|FBtr0334900 4818273|4818539|4817978 4820262|4819106|4819106 3R - 4818759 4818805 3'utr CG14657 FlyBase G48023.1 ATTACAGAATTCTGGCTTGGTCTTCAAGACTGATATAACAAAAAGCA 76 4818784 0.640526233 9 67 599 0.862068966 1.875061263 0.149425287 0.131578947 0.24137931 76 12 0 75 3R:4818759-4818805 8 CG14657 FBtr0334900|FBtr0078875|FBtr0334901 4817978|4818539|4818273 4819106|4819106|4820262 AAGACTGA 8mer-A1 dme-miR-14-3p 3R - 4818747 4818803 3'utr CG14657 FlyBase G36240.1 TACAGAATTCTGGCTTGGTCTTCAAGACTGATATAACAAAAAGCATCCGCTACGAAT 45 4818784 0.933472837 9 41 351 0.930555556 1.525044807 0.194444444 0.4 0.625 45 4 1 67 3R:4818747-4818803 8 56 2836 FBgn0037282 892.63 37.31666667 57.47333333 0.06273596 1.500669942 0.974364923 4 4 4 0.2 dme-miR-184-5p 6mer2-7 GATAAG 3R 4818915 4818920 - 3R_4818915_4818920_- 0.837649967 0.942529897 0.890089932 0.074161289 CG14657 FBtr0334901|FBtr0078875|FBtr0334900 4818273|4818539|4817978 4820262|4819106|4819106 3R - 4818871 4818959 3'utr CG14657 FlyBase G48024.1 ACGTAATACATATTTCCGTTGAAGTAGGTGGAAATGTAAGATAAGCCAGTAATCATGTAAAGTACACGTAGTGTTCAACTCGTTTCGTA 31 4818925 0.959341189 5 30 138 0.972222222 1.544068044 0.277777778 0.129032258 0.25 31 1 0 35 3R:4818871-4818959 6 CG14657 FBtr0334900|FBtr0078875|FBtr0334901 4817978|4818539|4818273 4819106|4819106|4820262 GATAAG 6mer2-7 dme-miR-184-5p 3R - 4818906 4818947 3'utr CG14657 FlyBase G36241.3 TTTCCGTTGAAGTAGGTGGAAATGTAAGATAAGCCAGTAATC 23 4818924 0.820315852 6 23 104 1 1.544068044 0.257142857 0.434782609 0.628571429 23 0 0 35 3R:4818906-4818947 6 24 2837 FBgn0037282 892.63 37.31666667 57.47333333 0.02688684 0.643144261 0.417584967 5 4 4.5 0.2 dme-miR-14-3p 7mer-A1 AGACTGA 3R 4938248 4938254 + 3R_4938248_4938254_+ 0.823349542 0.823229453 0.823289497 8.49E-05 Cdep FBtr0336812 4938074 4940218 3R + 4938232 4938258 3'utr Cdep FlyBase G40137.1 AACTTATTTGTAACTGAGACTGATTTA 6 4938243 0.694031952 4 6 52 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3R:4938232-4938258 7 Cdep FBtr0336812 4938074 4940218 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 4938237 4938267 3'utr Cdep FlyBase G30329.1 ATTTGTAACTGAGACTGATTTACGACTAACA 7 4938246 0.827758969 4 7 50 1 1.079181246 0 0.428571429 0.666666667 7 0 0 12 3R:4938237-4938267 7 6.5 2838 FBgn0265082 2047.223333 54.77333333 83.9 0.003175032 0.118670886 0.077473182 5 2 3.5 0.2 dme-miR-34-5p 7mer-A1 ACTGCCA 3R 5226951 5226957 + 3R_5226951_5226957_+ 0.815615868 0.817398688 0.816507278 0.00126063 Vps37B FBtr0078777|FBtr0305002 5226913|5226913 5227526|5227526 3R + 5226912 5226989 stop_codon Vps37B FlyBase G40174.1 TGAGGTCTTGGTCCTTGGTCCTTGGTCCTCAGCGAATTAACTGCCATGGCGCATCAGTCTGCAGCAGGCAAGTTTGTA 24 5226971 0.727038355 9 19 142 0.806451613 1.397940009 0.258064516 0.291666667 0.451612903 24 6 0 25 3R:5226912-5226989 7 Vps37B FBtr0078777|FBtr0305002|FBtr0305001 5226913|5226913|5226913 5227526|5227526|5227526 ACTGCCA 7mer-A1 dme-miR-34-5p 3R + 5226912 5226983 stop_codon Vps37B FlyBase G30347.1 TGAGGTCTTGGTCCTTGGTCCTTGGTCCTCAGCGAATTAACTGCCATGGCGCATCAGTCTGCAGCAGGCAAG 20 5226948 0.953393778 10 20 119 1 1.447158031 0.392857143 0.35 0.535714286 20 0 0 28 3R:5226912-5226983 7 12 2839 FBgn0037299 170.3333333 20.86666667 31.67333333 0.070450098 0.575079872 0.378867607 -20 3 -8.5 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 5227334 5227341 - 3R_5227334_5227341_- 0.476418807 0.47771421 0.477066508 0.000915986 Kat60 FBtr0078827|FBtr0334909 5227287|5227287 5227991|5227991 3R - 5227314 5227441 3'utr Kat60 FlyBase G48076.1 ATATATCATAGTTTAGTGCAGGCAGAGATGTGTGTACCAGAAAGTTCCCTCTGATTTGCAATTAACCCACTGTAATCAGAAGATGAAACTGAAGCAATATGTACTTAAAGAGAGGATTCTGAAATTTT 473 5227342 0.729365226 20 464 2411 0.980251346 2.737192643 0.122082585 0.143763214 0.272890485 473 11 0 546 3R:5227314-5227441 8 Kat60 FBtr0334909|FBtr0078827 5227287|5227287 5227991|5227991 GTACTTAA 8mer-A1 dme-miR-252-5p 3R - 5227307 5227373 3'utr Kat60 FlyBase G36284.1 ACTGTAATCAGAAGATGAAACTGAAGCAATATGTACTTAAAGAGAGGATTCTGAAATTTTAAACAAT 314 5227342 0.728860425 11 300 1623 0.953333333 2.331427297 0.111111111 0.340764331 0.54 314 20 1 429 3R:5227307-5227373 8 359 2840 FBgn0040208 671.9533333 31.69333333 48.73 0.534263292 11.32730332 7.367124974 1 1 1 0.2 dme-miR-1003-3p 6mer3-8 ATGTGA 3R 5227448 5227453 + 3R_5227448_5227453_+ 0.686103441 0.992301726 0.839202583 0.216514894 Vps37B FBtr0078777|FBtr0305002 5226913|5226913 5227526|5227526 3R + 5227336 5227470 coding-3'utr Vps37B FlyBase G40176.1 AAGTACATATTGCTTCAGTTTCATCTTCTGATTACAGTGGGTTAATTGCAAATCAGAGGGAACTTTCTGGTACACACATCTCTGCCTGCACTAAACTATGATATATATGTATATGTGAAAGTATAAATTAAGCGA 56 5227446 0.984861482 18 53 424 0.953125 1.484299839 0.21875 0.107142857 0.21875 56 2 1 61 3R:5227336-5227470 6 Vps37B FBtr0078777|FBtr0305002|FBtr0305001 5226913|5226913|5226913 5227526|5227526|5227526 ATGTGA 6mer3-8 dme-miR-1003-3p 3R + 5227372 5227469 3'utr Vps37B FlyBase G30350.1 GTGGGTTAATTGCAAATCAGAGGGAACTTTCTGGTACACACATCTCTGCCTGCACTAAACTATGATATATATGTATATGTGAAAGTATAAATTAAGCG 41 5227447 0.987656272 13 33 295 0.810344828 1.371067862 0.413793103 0.365853659 0.551724138 41 10 1 47 3R:5227372-5227469 6 26.5 2841 FBgn0037299 170.3333333 20.86666667 31.67333333 0.155577299 1.269968051 0.836665965 2 1 1.5 0.2 dme-miR-277-3p 7mer-m8 TGCATTT 3R 5236189 5236195 + 3R_5236189_5236195_+ 0.597848989 0.620072998 0.608960994 0.015714741 Mms19 FBtr0078778 5236033 5236288 3R + 5236149 5236204 3'utr Mms19 FlyBase G40186.1 TTTGGAAAAAGCAAAATTATAAAGTAAACGCGAAATTGTATGCATTTTATATTACT 15 5236185 0.990857872 4 14 147 0.9375 1.176091259 0.0625 0.066666667 0.125 15 1 0 15 3R:5236149-5236204 7 Mms19 FBtr0078778 5236033 5236288 TGCATTT 7mer-m8 dme-miR-277-3p 3R + 5236160 5236200 3'utr Mms19 FlyBase G30357.1 CAAAATTATAAAGTAAACGCGAAATTGTATGCATTTTATAT 14 5236185 0.76767203 4 14 133 1 1.322219295 0 0.285714286 0.523809524 14 0 0 21 3R:5236160-5236200 7 14 2842 FBgn0037301 547.33 20.46333333 31.32 0.025578719 0.684150513 0.446998723 4 4 4 0.2 dme-miR-263a-5p 6mer2-7 TGCCAT 3R 5268059 5268064 + 3R_5268059_5268064_+ 0.654484175 0.682970984 0.668727579 0.020143209 Hph FBtr0334275|FBtr0344333 5267839|5267839 5268598|5269046 3R + 5267894 5268399 5'utr Hph FlyBase G40198.1 CAAACACACATGTATAAAGCTAGTTAAAAACTATTTATAGCTTCGGAGGGGCGGCAGCGCAAGCCCGCATTGCGAAAGTTAATCAAAGCTCCTTTAGTCGTTAAGCCTTCTAGTTTAGTCTCTAAGTCGTACCCTTAGTCATTTTCGCATTAACCATTAGCTTACTGCCATGTCAGCGTCCGAGTTGGTTGTTTATTAATTTTAGTTTGTTGCATCTTTGTCAGGACCTTTTGCCTAGCTCATTCTTAGTTTTTGGCTGCCAAAGTATTATACCTAAAGAGAAGTTAACTAGATTCAATAACATAAGCAACTGTCGCGACGCTCATTGCATCTTATCTCAAAATTATTTAACAAGCCAGTAAATCGTGGACAAACGCGGTCACTGGCTAACACTCAATCTGTCGACTCTCATGCATCTTGTTAGACATCTTTTTCATATCGTTTACATCTAATAACAAACGGAAATAAATGTTTGTCCAAATACGTTCTCTTGTTATCTGTAAATC 530 5268055 0.8643311 102 500 4289 0.945773525 1.596963434 0.145135566 0.150943396 0.282296651 530 20 14 593 3R:5267894-5268399 6 Hph FBtr0344333|FBtr0334275 5267839|5267839 5269046|5268598 TGCCAT 6mer2-7 dme-miR-263a-5p 3R + 5267895 5268399 5'utr Hph FlyBase G30371.1 AAACACACATGTATAAAGCTAGTTAAAAACTATTTATAGCTTCGGAGGGGCGGCAGCGCAAGCCCGCATTGCGAAAGTTAATCAAAGCTCCTTTAGTCGTTAAGCCTTCTAGTTTAGTCTCTAAGTCGTACCCTTAGTCATTTTCGCATTAACCATTAGCTTACTGCCATGTCAGCGTCCGAGTTGGTTGTTTATTAATTTTAGTTTGTTGCATCTTTGTCAGGACCTTTTGCCTAGCTCATTCTTAGTTTTTGGCTGCCAAAGTATTATACCTAAAGAGAAGTTAACTAGATTCAATAACATAAGCAACTGTCGCGACGCTCATTGCATCTTATCTCAAAATTATTTAACAAGCCAGTAAATCGTGGACAAACGCGGTCACTGGCTAACACTCAATCTGTCGACTCTCATGCATCTTGTTAGACATCTTTTTCATATCGTTTACATCTAATAACAAACGGAAATAAATGTTTGTCCAAATACGTTCTCTTGTTATCTGTAAATC 372 5268055 0.909777146 86 346 2965 0.925476603 1.882443217 0.131715771 0.379032258 0.59965338 372 37 6 534 3R:5267895-5268399 6 78 2843 FBgn0264785 976.6833333 49.43666667 74.10666667 0.079862118 1.577776279 1.052536884 4 4 4 0.2 dme-miR-33-5p 6mer3-8 CAATGC 3R 5397500 5397505 + 3R_5397500_5397505_+ 0.881965481 0.795563551 0.838764516 0.061095369 CG1172 FBtr0309312|FBtr0333810 5396179|5396179 5397614|5399510 3R + 5397484 5397521 3'utr CG1172 FlyBase G40230.1 ACACTGTGCGAAAGTGCAATGCCAAAGTTGAAATAAAT 22 5397501 0.776059234 5 21 93 0.923076923 1.380211242 0.307692308 0.181818182 0.307692308 22 2 0 24 3R:5397484-5397521 6 CG1172 FBtr0333810|FBtr0309312 5396179|5396179 5399510|5397614 CAATGC 6mer3-8 dme-miR-33-5p 3R + 5397487 5397532 3'utr CG1172 FlyBase G30399.1 CTGTGCGAAAGTGCAATGCCAAAGTTGAAATAAATATTGATGGGTG 6 5397502 0.931761248 4 6 26 1 0.954242509 0.444444444 0.5 0.666666667 6 0 0 9 3R:5397487-5397532 6 12.5 2844 FBgn0264712 391.6633333 23.33 36.07 0.031915165 0.535790827 0.346548378 -1 -2 -1.5 0.2 dme-miR-307a-3p 8mer-A1 GGTTGTGA 3R 5458900 5458907 - 3R_5458900_5458907_- 0.623836508 0.627923956 0.625880232 0.002890299 PEK FBtr0078770|FBtr0330027|FBtr0330026 5458561|5458561|5458561 5459391|5459391|5459391 3R - 5458883 5458928 3'utr PEK FlyBase G48172.1 CTAATTGCCCATAGAGATAATGGTTGTGACTAATCGCTTGGCATAC 70 5458908 0.798438518 3 67 491 0.953488372 1.436692598 0.093023256 0.171428571 0.325581395 70 2 2 82 3R:5458883-5458928 8 PEK FBtr0330027|FBtr0330026|FBtr0078770 5458561|5458561|5458561 5459391|5459391|5459391 GGTTGTGA 8mer-A1 dme-miR-307a-3p 3R - 5458884 5458924 3'utr PEK FlyBase G36375.1 TTGCCCATAGAGATAATGGTTGTGACTAATCGCTTGGCATA 55 5458908 0.796734868 3 53 371 0.975609756 1.903089987 0.158536585 0.381818182 0.585365854 55 2 0 80 3R:5458884-5458924 8 62.5 2845 FBgn0037327 1339.34 35.69 54.59666667 0.046664775 1.75119081 1.144758532 1 1 1 0.2 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 5469515 5469520 + 3R_5469515_5469520_+ 0.822121855 0.917701914 0.869911885 0.067585266 CG12162 FBtr0078680|FBtr0078681 5469438|5469438 5469539|5469566 3R + 5469497 5469534 3'utr CG12162 FlyBase G40235.1 CATGCGTACATGTGTTTAGTGCAAATTACAATAATCAA 20 5469511 0.713485644 3 20 169 1 1.322219295 0 0.05 0.095238095 20 0 0 21 3R:5469497-5469534 6 CG12162 FBtr0078681|FBtr0078680 5469438|5469438 5469566|5469539 GTGCAA 6mer3-8 dme-miR-92b-3p 3R + 5469493 5469532 3'utr CG12162 FlyBase G30403.1 AATGCATGCGTACATGTGTTTAGTGCAAATTACAATAATC 13 5469512 0.740069938 3 13 107 1 1.361727836 0 0.461538462 0.695652174 13 0 0 23 3R:5469493-5469532 6 16.5 2846 FBgn0037329 203.12 15.37666667 23.49666667 0.081232769 1.073054411 0.702227266 4 3 3.5 0.2 dme-miR-34-5p 7mer-A1 ACTGCCA 3R 5485110 5485116 + 3R_5485110_5485116_+ 0.394949097 0.39474113 0.394845113 0.000147078 Hcs FBtr0078683|FBtr0345254|FBtr0345253|FBtr0336769 5484906|5484906|5484906|5484906 5485393|5485393|5485393|5485393 3R + 5485098 5485146 3'utr Hcs FlyBase G40256.1 ACTAAATTAAATACTGCCAAAGAGAATTATATGTTAAAGGAAGTCTCAA 12 5485111 0.958529711 4 12 57 1 1.176091259 0.066666667 0.166666667 0.333333333 12 0 0 15 3R:5485098-5485146 7 Hcs FBtr0345253|FBtr0336769|FBtr0078683|FBtr0345254 5484906|5484906|5484906|5484906 5485393|5485393|5485393|5485393 ACTGCCA 7mer-A1 dme-miR-34-5p 3R + 5485092 5485124 3'utr Hcs FlyBase G30417.1 TAATCCACTAAATTAAATACTGCCAAAGAGAAT 7 5485111 0.938792776 2 7 31 1 0.84509804 0.285714286 0 0 7 0 0 7 3R:5485092-5485124 7 8.5 2847 FBgn0037332 392.2933333 11.98 18.24666667 0.02166746 0.70951586 0.465838509 -1 -1 -1 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 5540463 5540468 - 3R_5540463_5540468_- 0.992361269 0.995464174 0.993912722 0.002194082 CG2519 FBtr0078761|FBtr0336771|FBtr0078762 5539508|5539508|5539508 5541031|5541031|5541031 3R - 5540452 5540483 3'utr CG2519 FlyBase G48229.1 ATGAGATTTTTCTTTGTACCTAACCAACAACA 12 5540469 0.865896085 2 11 94 1 1.176091259 0.333333333 0.166666667 0.333333333 12 0 0 15 3R:5540452-5540483 6 CG2519 FBtr0078762|FBtr0078761|FBtr0336771 5539508|5539508|5539508 5541031|5541031|5541031 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 5540451 5540493 3'utr CG2519 FlyBase G36413.1 AACATAAGCCATGAGATTTTTCTTTGTACCTAACCAACAACAA 16 5540469 0.981978876 3 15 113 1 1.361727836 0 0.375 0.565217391 16 0 0 23 3R:5540451-5540493 6 12.5 2848 FBgn0037336 963.7466667 20.52333333 31.41666667 0.012970213 0.609062855 0.397877984 1 1 1 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3R 5540650 5540656 - 3R_5540650_5540656_- 0.581181023 0.66039819 0.620789606 0.056015019 CG2519 FBtr0078761|FBtr0336771|FBtr0078762 5539508|5539508|5539508 5541031|5541031|5541031 3R - 5540513 5540985 3'utr CG2519 FlyBase G48230.1 TCATATAGATTTCTCGTGGCTGCTCGCTGTTGAAAAAAATCCGTTCTATCGAATGAAATCTCGAATATTGTGTTATTAAAGCGATGTTTTAAAAAGGAATCCGATTGTTCACACAAGAGTCCGAATCTCAATTAGAAAAACAAAATTACAGACCAGGGAACAATCGTAAATACTTCAAATTTTCTTCCCTTCTCAATATGAAATCCAAGGCAGCTAGCTAAAGTGTAATAAGAGCAAATTTATCTAACTATATTTACAGTATATGATATACATATATGATTCGGTAATCTACACCGCATAGGCGAAAAATCGAAAAGTAAAAACTTCAATCTAGTCGCAAGCAAATTTTATGCAGCAATCTAATTCGTTTTCGTATGCAATCTATAGGCATATTCTAATCAAAGCTTCATGACAGTTTTACATCCGAGTTTAGTTTATTGCGATATCCGTTCTAAAAGCCAATAAAGAAACAT 351 5540657 0.980791009 67 305 2176 0.871733967 1.610423555 0.123515439 0.170940171 0.308788599 351 46 8 367 3R:5540513-5540985 7 CG2519 FBtr0078762|FBtr0078761|FBtr0336771 5539508|5539508|5539508 5541031|5541031|5541031 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3R - 5540623 5540671 3'utr CG2519 FlyBase G36415.1 AAGTAAAAACTTCAATCTAGTCGCAAGCAAATTTTATGCAGCAATCTAA 44 5540659 0.765630006 6 39 226 0.915492958 1.511883361 0.028169014 0.409090909 0.633802817 44 5 1 65 3R:5540623-5540671 7 49 2849 FBgn0037336 963.7466667 20.52333333 31.41666667 0.050843237 2.387526393 1.559681698 1 3 2 0.2 dme-miR-980-3p 8mer-A1 GGCAGCTA 3R 5540770 5540777 - 3R_5540770_5540777_- 0.635458122 0.65729953 0.646378826 0.015444202 CG2519 FBtr0078761|FBtr0336771|FBtr0078762 5539508|5539508|5539508 5541031|5541031|5541031 3R - 5540513 5540985 3'utr CG2519 FlyBase G48230.1 TCATATAGATTTCTCGTGGCTGCTCGCTGTTGAAAAAAATCCGTTCTATCGAATGAAATCTCGAATATTGTGTTATTAAAGCGATGTTTTAAAAAGGAATCCGATTGTTCACACAAGAGTCCGAATCTCAATTAGAAAAACAAAATTACAGACCAGGGAACAATCGTAAATACTTCAAATTTTCTTCCCTTCTCAATATGAAATCCAAGGCAGCTAGCTAAAGTGTAATAAGAGCAAATTTATCTAACTATATTTACAGTATATGATATACATATATGATTCGGTAATCTACACCGCATAGGCGAAAAATCGAAAAGTAAAAACTTCAATCTAGTCGCAAGCAAATTTTATGCAGCAATCTAATTCGTTTTCGTATGCAATCTATAGGCATATTCTAATCAAAGCTTCATGACAGTTTTACATCCGAGTTTAGTTTATTGCGATATCCGTTCTAAAAGCCAATAAAGAAACAT 351 5540784 0.980791009 67 305 2176 0.871733967 1.610423555 0.123515439 0.170940171 0.308788599 351 46 8 367 3R:5540513-5540985 8 CG2519 FBtr0078762|FBtr0078761|FBtr0336771 5539508|5539508|5539508 5541031|5541031|5541031 GGCAGCTA 8mer-A1 dme-miR-980-3p 3R - 5540748 5540871 3'utr CG2519 FlyBase G36417.1 AAGAGTCCGAATCTCAATTAGAAAAACAAAATTACAGACCAGGGAACAATCGTAAATACTTCAAATTTTCTTCCCTTCTCAATATGAAATCCAAGGCAGCTAGCTAAAGTGTAATAAGAGCAAA 106 5540782 0.854997342 22 90 520 0.838709677 1.414973348 0.064516129 0.349056604 0.55483871 106 21 4 130 3R:5540748-5540871 8 85.5 2850 FBgn0037336 963.7466667 20.52333333 31.41666667 0.08871626 4.16598993 2.721485411 7 5 6 0.2 dme-miR-970-3p 6mer3-8 TCTTAT 3R 5570196 5570201 + 3R_5570196_5570201_+ 0.999979774 0.999999608 0.999989691 1.40E-05 Rheb FBtr0078694|FBtr0078693 5570116|5570116 5570491|5570491 3R + 5570140 5570294 3'utr Rheb FlyBase G40293.1 CGGCCGAACTGTTGGAAATACGGCAAATCGCTATGGCAATACGAAAATCGATTATCTCTTATCTACACAGTTGGGTCAGCGTGCATGGCGGGGCCGTACCCTTTGTGCGCAGCAGGAAAATCTAAAAATCTAATAGACCTAGTATTCTTAAGACC 61 5570198 0.983994104 16 59 455 0.96969697 1.505149978 0.075757576 0.081967213 0.151515152 61 1 1 64 3R:5570140-5570294 6 Rheb FBtr0078694|FBtr0078693 5570116|5570116 5570491|5570491 TCTTAT 6mer3-8 dme-miR-970-3p 3R + 5570180 5570247 3'utr Rheb FlyBase G30441.1 ACGAAAATCGATTATCTCTTATCTACACAGTTGGGTCAGCGTGCATGGCGGGGCCGTACCCTTTGTGC 25 5570191 0.983910273 7 24 185 0.954545455 1.62324929 0 0.6 0.772727273 25 2 0 42 3R:5570180-5570247 6 30.5 2851 FBgn0041191 427.6933333 44.04666667 67.49 0.071312779 0.692447404 0.451918803 -2 5 1.5 0.2 dme-miR-282-5p 7mer-A1 GAGGCTA 3R 5582119 5582125 - 3R_5582119_5582125_- 0.81942891 0.819460969 0.81944494 2.27E-05 CG2926 FBtr0336762 5579299 5584787 3R - 5582099 5582179 5'utr CG2926 FlyBase G48289.1 ATTTGCAGTGCTGTGGGAGCAGTAAAGAAGACGAAGCGCAAGCGTAAAAAGTTGGAGGCTAAGCCAGTGGCTATCATCGAT 123 5582127 0.951597146 7 121 561 0.978571429 2.136720567 0.428571429 0.12195122 0.228571429 123 3 0 137 3R:5582099-5582179 7 CG2926 FBtr0336762 5579299 5584787 GAGGCTA 7mer-A1 dme-miR-282-5p 3R - 5582099 5582148 5'utr CG2926 FlyBase G36458.1 CGAAGCGCAAGCGTAAAAAGTTGGAGGCTAAGCCAGTGGCTATCATCGAT 87 5582127 0.817003252 4 83 401 0.944444444 2.075546961 0.531746032 0.356321839 0.555555556 87 7 0 119 3R:5582099-5582148 7 101.5 2852 FBgn0037344 2023.256667 29.51333333 45.14 0.050166646 3.43912356 2.248560035 2 2 2 0.2 dme-miR-305-5p 8mer-m1 AGTACAAT 3R 5584645 5584652 - 3R_5584645_5584652_- 0.57034249 0.570360561 0.570351526 1.28E-05 CG2926 FBtr0336762 5579299 5584787 3R - 5584595 5584680 intron-5'utr CG2926 FlyBase G48294.1 AGGATGATGACGATATGAATGAAGATTTAGTACAATTAGATGATGATGATGAGGATACGGATATACCATTGCCTTTGGGGCCTGAG 52 5584654 0.724643409 14 52 383 1 1.763427994 0.172413793 0.115384615 0.206896552 52 0 0 58 3R:5584595-5584680 8 CG2926 FBtr0336762 5579299 5584787 AGTACAAT 8mer-m1 dme-miR-305-5p 3R - 5584534 5584670 5'utr CG2926 FlyBase G36463.1 CGATATGAATGAAGATTTAGTACAATTAGATGATGATGATGAGGATACGGATATACCATTGCCTTTGGGGCCTGAGCCCGAACCCGTTCCCGAAAAAGTCCCGAAAAGTAGTGATGATGACCTCTACGAGCCAGAGA 40 5584654 0.955552208 15 34 251 0.85 1.008600172 0.316666667 0.375 0.583333333 40 5 4 51 3R:5584534-5584670 8 31.5 2853 FBgn0037344 2023.256667 29.51333333 45.14 0.015568959 1.067314208 0.697828977 2 2 2 0.2 dme-miR-79-3p 6mer2-7 AGCTTT 3R 5594277 5594282 + 3R_5594277_5594282_+ 0.875164275 0.873103715 0.874133995 0.001457064 Vha26 FBtr0346137|FBtr0078701|FBtr0078700 5593353|5593353|5593353 5595356|5594699|5594699 3R + 5594245 5594305 3'utr Vha26 FlyBase G40316.1 TAGCTAAGTTTGTTGACCTGACCATCAAGTGCAGCTTTCACACCCTCATATAACTACTTAA 25 5594281 0.961779259 7 20 152 0.827586207 1.380211242 0.103448276 0.16 0.275862069 25 5 0 24 3R:5594245-5594305 6 Vha26 FBtr0078700|FBtr0078701|FBtr0346137 5593353|5593353|5593353 5594699|5594699|5595356 AGCTTT 6mer2-7 dme-miR-79-3p 3R + 5594136 5594299 3'utr Vha26 FlyBase G30454.1 ATGTCTGTTGTTGTTGAGATACCGAGAGTAGAGAATACACACTGCTTAGCACGCGACACTTAATACCCATTCATTACACATGCACCAACGACGATGAAGTTTTGCCAAGTAGCTAAGTTTGTTGACCTGACCATCAAGTGCAGCTTTCACACCCTCATATAACT 29 5594281 0.978436069 12 27 177 0.934782609 1.33243846 0.043478261 0.448275862 0.652173913 29 2 1 43 3R:5594136-5594299 6 16.5 2854 FBgn0015324 3424.973333 191.1566667 292.79 0.004817556 0.086316634 0.056354384 -4 -4 -4 0.2 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 3R 5603024 5603031 + 3R_5603024_5603031_+ 0.67454503 0.670755621 0.672650325 0.00267951 CG1427 FBtr0333279 5601975 5603185 3R + 5603005 5603045 3'utr CG1427 FlyBase G40324.1 GCAGCAACCTGCAAGTTCCGTACCTGACTGTAGCGGCAGGA 7 5603020 0.874591877 3 7 29 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 3R:5603005-5603045 8 CG1427 FBtr0333279 5601975 5603185 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R + 5602988 5603045 intron-3'utr CG1427 FlyBase G30458.1 AGATTTCGGCTCCCACCGCAGCAACCTGCAAGTTCCGTACCTGACTGTAGCGGCAGGA 5 5603035 0.972291768 3 4 24 0.857142857 0.77815125 0.285714286 0.4 0.571428571 5 1 0 6 3R:5602988-5603045 8 5.5 2855 FBgn0037347 155.3333333 12.17666667 18.71333333 0.035407725 0.451683548 0.293908087 4 -11 -3.5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 5616811 5616816 - 3R_5616811_5616816_- 0.850659439 0.874753292 0.862706365 0.01703696 Spec2 FBtr0078739 5616642 5617640 3R - 5616793 5616853 3'utr Spec2 FlyBase G48356.1 CTGGGCCAGCGACAATGCACCTAAGATGGACTATGGAGTACCTTTGTAGAACCCTGATTTA 22 5616827 0.96561233 4 22 119 1 1.380211242 0.083333333 0.090909091 0.166666667 22 0 0 24 3R:5616793-5616853 6 Spec2 FBtr0078739 5616642 5617640 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 5616795 5616852 3'utr Spec2 FlyBase G36505.1 TGGGCCAGCGACAATGCACCTAAGATGGACTATGGAGTACCTTTGTAGAACCCTGATT 25 5616809 0.966914639 4 24 141 0.952380952 1.602059991 0.30952381 0.44 0.666666667 25 2 0 40 3R:5616795-5616852 6 19 2856 FBgn0044823 199.1233333 13.74666667 20.92333333 0.09541825 1.382153249 0.908077107 11 -7 2 0.2 dme-miR-34-5p 7mer-A1 ACTGCCA 3R 5625661 5625667 + 3R_5625661_5625667_+ 0.554856737 0.717534172 0.636195455 0.115030363 RpL13A FBtr0335214 5625375 5625947 3R + 5625565 5625713 3'utr RpL13A FlyBase G40338.1 GTGTGTTCGACGGCATCCCATCGCCCTACGACAAGCGTCGCCGCGTCGTCGTGCCCATCGCTATGCGTGTGCTGACCCTGCGCTCCGACCGCAAGTACTGCCAGGTGGGTCGCCTGTCGCACGAGGTCGGCTGGCACTACCAGGACGTG 93 5625660 0.900201278 22 87 372 0.930434783 2.029383778 0.295652174 0.204301075 0.356521739 93 8 0 107 3R:5625565-5625713 7 RpL13A FBtr0335214 5625375 5625947 ACTGCCA 7mer-A1 dme-miR-34-5p 3R + 5625565 5625686 3'utr RpL13A FlyBase G30469.1 GTGTGTTCGACGGCATCCCATCGCCCTACGACAAGCGTCGCCGCGTCGTCGTGCCCATCGCTATGCGTGTGCTGACCCTGCGCTCCGACCGCAAGTACTGCCAGGTGGGTCGCCTGTCGCAC 64 5625660 0.837979753 17 56 282 0.884955752 1.301029996 0.247787611 0.515625 0.725663717 64 9 4 100 3R:5625565-5625686 7 34 2857 FBgn0037351 13566.65333 2375.826667 3587.31 0.002506145 0.014310808 0.009477854 1 1 1 0.2 dme-miR-277-3p 7mer-A1 GCATTTA 3R 5633191 5633197 + 3R_5633191_5633197_+ 0.767657748 0.631884305 0.699771026 0.096006292 CG31549 FBtr0078707|FBtr0335215 5633168|5633168 5633321|5633321 3R + 5633129 5633210 stop_codon CG31549 FlyBase G40345.1 TGCCCGTCGATGGAGGTCGTCACGCCATGTGCCCGCGATAGGATGCGGATGAGCAAATGGTGGCATTTATCGAATTTAGCGT 34 5633186 0.810633139 8 29 206 0.860465116 1.091080469 0.348837209 0.176470588 0.348837209 34 4 2 37 3R:5633129-5633210 7 CG31549 FBtr0335215|FBtr0078707 5633168|5633168 5633321|5633321 GCATTTA 7mer-A1 dme-miR-277-3p 3R + 5633168 5633199 stop_codon CG31549 FlyBase G30475.1 AGGATGCGGATGAGCAAATGGTGGCATTTATC 7 5633186 0.865596495 2 6 40 0.875 0.84509804 0.125 0.142857143 0.25 7 1 0 7 3R:5633168-5633199 7 17 2858 FBgn0051549 46.66666667 5.68 8.726666667 0.364285714 2.992957746 1.948051948 5 5 5 0.2 dme-miR-7-5p 6mer3-8 GTCTTC 3R 5640367 5640372 - 3R_5640367_5640372_- 0.997841297 0.940991137 0.969416217 0.040199162 MTA1-like FBtr0078733|FBtr0290206|FBtr0078734 5639117|5638653|5639117 5640428|5640428|5640428 3R - 5640353 5640393 3'utr MTA1-like FlyBase G48371.1 ATCGGCAACCAAGTTGTTATCGTCTTCAGCAAGTAGGTTCG 8 5640374 0.707407518 2 5 47 0.666666667 0.77815125 0.111111111 0.125 0.222222222 8 3 0 6 3R:5640353-5640393 6 MTA1-like FBtr0078734|FBtr0290206|FBtr0078733 5639117|5638653|5639117 5640428|5640428|5640428 GTCTTC 6mer3-8 dme-miR-7-5p 3R - 5640347 5640383 3'utr MTA1-like FlyBase G36518.1 AAGTTGTTATCGTCTTCAGCAAGTAGGTTCGAGCAGC 8 5640374 0.983903798 2 8 61 1 1.041392685 0 0.375 0.545454545 8 0 0 11 3R:5640347-5640383 6 7 2859 FBgn0027951 1255.973333 34.05666667 52.26666667 0.005573367 0.205539787 0.133928571 2 2 2 0.2 dme-miR-968-5p 8mer-A1 ACTACTTA 3R 5678828 5678835 + 3R_5678828_5678835_+ 0.619398141 0.605692623 0.612545382 0.009691252 Atg17 FBtr0078716|FBtr0334946 5678800|5678800 5679930|5679930 3R + 5678812 5678868 3'utr Atg17 FlyBase G40433.1 TTGGGACTAACATATAACTACTTATATACATAAACGGAGTGTGTATCTAGGCTAAAT 17 5678836 0.77576922 5 14 122 0.823529412 0.84509804 0.411764706 0 0 17 2 1 14 3R:5678812-5678868 8 Atg17 FBtr0334946|FBtr0078716 5678800|5678800 5679930|5679930 ACTACTTA 8mer-A1 dme-miR-968-5p 3R + 5678793 5678892 stop_codon Atg17 FlyBase G30533.1 TCCGAGTAGTGTACGACAGTTGGGACTAACATATAACTACTTATATACATAAACGGAGTGTGTATCTAGGCTAAATCTTGTACTCTATGTAGGAACCGCA 22 5678836 0.977926325 8 19 127 0.9 1.431363764 0.366666667 0.318181818 0.5 22 3 0 27 3R:5678793-5678892 8 12 2860 FBgn0037363 1350.75 25.94 39.87666667 0.008883953 0.462606014 0.300927861 -8 -8 -8 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 5712022 5712028 + 3R_5712022_5712028_+ 0.611629835 0.611398186 0.61151401 0.000163766 plx FBtr0302092|FBtr0302091|FBtr0334947|FBtr0302090|FBtr0334948 5711955|5711955|5711955|5711955|5711955 5712837|5712837|5712837|5712837|5712837 3R + 5712003 5712101 3'utr plx FlyBase G40454.1 AAGGCCCGCCGGCAGAACGGGCAGCTTTCAAACCCAACGCTACTCATAACCTCTTCTGTTGCGGCTTAGATACGATTAACCCAACCTATAAGATACAAA 40 5712049 0.97420217 10 40 246 1 1.707570176 0.176470588 0.175 0.352941176 40 0 0 51 3R:5712003-5712101 7 plx FBtr0302090|FBtr0334948|FBtr0302091|FBtr0334947|FBtr0302092 5711955|5711955|5711955|5711955|5711955 5712837|5712837|5712837|5712837|5712837 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 5712003 5712074 3'utr plx FlyBase G30546.1 AAGGCCCGCCGGCAGAACGGGCAGCTTTCAAACCCAACGCTACTCATAACCTCTTCTGTTGCGGCTTAGATA 27 5712029 0.978762343 7 23 157 0.847826087 1.113943352 0.282608696 0.444444444 0.673913043 27 5 2 39 3R:5712003-5712074 7 7.5 2861 FBgn0261261 331.2833333 6.486666667 9.993333333 0.022639231 1.156217883 0.750500334 -27 -7 -17 0.2 dme-miR-12-5p 7mer-m8 AATACTC 3R 5780371 5780377 + 3R_5780371_5780377_+ 0.668730635 0.668319322 0.668524979 0.000290833 jagn FBtr0078624|FBtr0078625 5780365|5780365 5781308|5780763 3R + 5780357 5780447 stop_codon jagn FlyBase G40487.1 GTTCCAGTAATCTAAATACTCGCCAAACTAGTAAACGCCGGAATGCAGGGCTAGTTGTAAATAATTTGGAAACTTGAAACTAACTCAAAAC 37 5780373 0.830340841 8 35 177 0.94 1.672097858 0.16 0.243243243 0.44 37 3 0 47 3R:5780357-5780447 7 jagn FBtr0078624|FBtr0078625 5780365|5780365 5781308|5780763 AATACTC 7mer-m8 dme-miR-12-5p 3R + 5780360 5780432 stop_codon jagn FlyBase G30566.1 CCAGTAATCTAAATACTCGCCAAACTAGTAAACGCCGGAATGCAGGGCTAGTTGTAAATAATTTGGAAACTTG 28 5780373 0.996941906 5 27 134 0.975609756 1.602059991 0.097560976 0.25 0.487804878 28 1 0 40 3R:5780360-5780432 7 26.5 2862 FBgn0037374 792.6 64.87666667 99.02 0.033434267 0.408467348 0.267622702 -2 -2 -2 0.2 dme-miR-970-3p 6mer3-8 TCTTAT 3R 5780626 5780631 + 3R_5780626_5780631_+ 0.998077491 0.999923764 0.999000627 0.001305531 jagn FBtr0078624|FBtr0078625 5780365|5780365 5781308|5780763 3R + 5780469 5780641 3'utr jagn FlyBase G40488.1 GAAACTATGGTAAACTAAAGTTATGCAGCTGTTAAGGTATCGCACACTTAGTCATACAGGAAGGGAAACATATGGTCGAAACTGAGCGAAGCGTCGGCGGTAAGGTTATTGTTAGTTGAAAGTTAGTTGATACCGTTTTCAAATTGATTAAATAGACTCTTATCCATATACAC 81 5780621 0.986560022 19 78 658 0.98019802 1.51851394 0.089108911 0.222222222 0.376237624 81 0 2 99 3R:5780469-5780641 6 jagn FBtr0078624|FBtr0078625 5780365|5780365 5781308|5780763 TCTTAT 6mer3-8 dme-miR-970-3p 3R + 5780582 5780648 3'utr jagn FlyBase G30568.1 AGTTGAAAGTTAGTTGATACCGTTTTCAAATTGATTAAATAGACTCTTATCCATATACACATGTACA 35 5780621 0.986078145 6 35 295 1 1.662757832 0.043478261 0.285714286 0.456521739 35 0 0 46 3R:5780582-5780648 6 46 2863 FBgn0037374 792.6 64.87666667 99.02 0.058036841 0.709037661 0.464552616 5 5 5 0.2 dme-miR-8-3p 7mer-A1 AGTATTA 3R 5798593 5798599 + 3R_5798593_5798599_+ 0.774109547 0.70662098 0.740365263 0.047721576 CG10979 FBtr0078631|FBtr0335518 5798393|5798393 5798749|5799994 3R + 5798530 5798683 3'utr CG10979 FlyBase G40526.1 AGTGTCCTTATTGTAAAACCAACTAAGCAAGAAACAGAATCCCTAAATGATAAATACGCTTCGAGTATTACGCGGTAAAAACAACCAAAACGAATTGAAAATCGTAGCATAATTTTGGGCTATTAGCAAATGTTTGTTGTTTGTGTGAAAAAGT 58 5798589 0.946079535 18 53 393 0.925373134 1.315270435 0.164179104 0.137931034 0.253731343 58 3 2 62 3R:5798530-5798683 7 CG10979 FBtr0335518|FBtr0078631 5798393|5798393 5799994|5798749 AGTATTA 7mer-A1 dme-miR-8-3p 3R + 5798567 5798611 3'utr CG10979 FlyBase G30589.1 AATCCCTAAATGATAAATACGCTTCGAGTATTACGCGGTAAAAAC 22 5798588 0.774667251 3 21 146 0.941176471 1.505149978 0.088235294 0.318181818 0.558823529 22 2 0 32 3R:5798567-5798611 7 31.5 2864 FBgn0037379 1005.826667 25.93333333 39.53 0.031317523 1.214652956 0.796863142 4 5 4.5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 5798721 5798726 + 3R_5798721_5798726_+ 0.613822959 0.592074201 0.60294858 0.015378724 CG10979 FBtr0078631|FBtr0335518 5798393|5798393 5798749|5799994 3R + 5798697 5798777 3'utr CG10979 FlyBase G40527.1 AATGTTATAGTTAATAATGTATATGTACCTAATTTTATAATCCCGCATAAAGTAAAACACGCAAGTGTATACGGTTGTTGA 77 5798720 0.991226121 5 74 782 0.968085106 1.959041392 0.021276596 0.194805195 0.340425532 77 3 0 91 3R:5798697-5798777 6 CG10979 FBtr0335518|FBtr0078631 5798393|5798393 5799994|5798749 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 5798700 5798744 3'utr CG10979 FlyBase G30591.1 GTTATAGTTAATAATGTATATGTACCTAATTTTATAATCCCGCAT 43 5798720 0.814240558 2 42 454 0.98245614 1.748188027 0 0.23255814 0.421052632 43 1 0 56 3R:5798700-5798744 6 58.5 2865 FBgn0037379 1005.826667 25.93333333 39.53 0.058161115 2.255784062 1.479888692 1 1 1 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 3R 5799020 5799027 + 3R_5799020_5799027_+ 0.642974681 0.638248027 0.640611354 0.003342282 CG10979 FBtr0335518 5798393 5799994 3R + 5798973 5799046 3'utr CG10979 FlyBase G40528.1 TTGTTGAACTTTTGTTTGCTCGCATTTGTAGGTCTCTTCTAAAGCATACCAAAGAATTACTCTTTGTCGACCAA 17 5799019 0.983384985 7 15 126 0.842105263 0.726998728 0.105263158 0.117647059 0.210526316 17 1 2 16 3R:5798973-5799046 8 CG10979 FBtr0335518 5798393 5799994 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 5798995 5799034 3'utr CG10979 FlyBase G30592.1 CATTTGTAGGTCTCTTCTAAAGCATACCAAAGAATTACTC 7 5799019 0.964070263 2 7 49 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3R:5798995-5799034 8 9.5 2866 FBgn0037379 1005.826667 25.93333333 39.53 0.009444967 0.366323907 0.240323805 1 1 1 0.2 dme-bantam-3p 6mer3-8 TGATCT 3R 5799436 5799441 + 3R_5799436_5799441_+ 0.979487186 0.94888692 0.964187053 0.02163768 CG10979 FBtr0335518 5798393 5799994 3R + 5799418 5799462 3'utr CG10979 FlyBase G40530.1 AGACATTTGGCAGAGTCCTGATCTACACGAGTGGTTCAACGTATT 8 5799425 0.976524514 4 7 52 0.916666667 1.041392685 0 0.375 0.583333333 8 1 0 11 3R:5799418-5799462 6 CG10979 FBtr0335518 5798393 5799994 TGATCT 6mer3-8 dme-bantam-3p 3R + 5799410 5799466 3'utr CG10979 FlyBase G30593.1 TCCCTCGCAGACATTTGGCAGAGTCCTGATCTACACGAGTGGTTCAACGTATTTATA 8 5799437 0.96422517 5 8 47 1 1.230448921 0.117647059 0.625 0.823529412 8 0 0 17 3R:5799410-5799466 6 7.5 2867 FBgn0037379 1005.826667 25.93333333 39.53 0.007456553 0.289203085 0.18972932 11 -1 5 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3R 5826342 5826348 + 3R_5826342_5826348_+ 0.52119788 0.521213711 0.521205796 1.12E-05 dgrn FBtr0078638|FBtr0078639|FBtr0344116 5826237|5826237|5826237 5826576|5826576|5826576 3R + 5826284 5826402 3'utr dgrn FlyBase G40537.1 AATATAGTTTAAAAAAAAACGCTTAACTATGTTAGAGACGGCAAATAATGTCTGTTCTTGTGATTCAGAAAAAATTAGTTATTTAAGTTGTCCTATGTAATCAGTGGCGCCCAAAAATA 83 5826341 0.99890242 16 73 711 0.871287129 1.467361417 0.297029703 0.168674699 0.316831683 83 11 2 88 3R:5826284-5826402 7 dgrn FBtr0078638|FBtr0078639|FBtr0344116 5826237|5826237|5826237 5826576|5826576|5826576 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 5826258 5826373 3'utr dgrn FlyBase G30596.1 ATTTTTTGCTCTGTGAGCCTTAATATAATATAGTTTAAAAAAAAACGCTTAACTATGTTAGAGACGGCAAATAATGTCTGTTCTTGTGATTCAGAAAAAATTAGTTATTTAAGTTG 48 5826341 0.802247247 13 43 434 0.925373134 1.315270435 0.208955224 0.270833333 0.47761194 48 3 2 62 3R:5826258-5826373 7 48.5 2868 FBgn0037384 485 36.97 56.92333333 0.1 1.311874493 0.852023189 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 5849859 5849866 - 3R_5849859_5849866_- 0.648587092 0.648680468 0.64863378 6.60E-05 disp FBtr0078665|FBtr0078665|FBtr0078665 5849695|5849695|5849695 5850520|5850520|5850520 3R - 5849838 5849887 3'utr disp FlyBase G48474.1 ACGTTTGTAATAACCATGTAACTGTGATACAGAAGGTGAGAATCTTAATG 23 5849869 0.710328348 5 19 140 0.807692308 1.322219295 0.076923077 0.130434783 0.230769231 23 5 0 21 3R:5849838-5849887 8 disp FBtr0078665|FBtr0078665|FBtr0078665 5849695|5849695|5849695 5850520|5850520|5850520 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 5849806 5849897 3'utr disp FlyBase G36594.1 ACACACGCTCACGTTTGTAATAACCATGTAACTGTGATACAGAAGGTGAGAATCTTAATGAAATTGGTGTTTATACAGACATAGTGTTATAT 28 5849870 0.989007898 9 18 178 0.684210526 0.812913357 0.157894737 0.296296296 0.5 27 9 3 26 3R:5849806-5849897 8 22 2869 FBgn0029088 548.99 13.48 20.58 0.04007359 1.632047478 1.068999028 3 4 3.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 6000820 6000826 - 3R_6000820_6000826_- 0.750029345 0.750140426 0.750084885 7.86E-05 Rm62 FBtr0309321|FBtr0309321|FBtr0309321|FBtr0078653|FBtr0078653|FBtr0078653|FBtr0078650|FBtr0078650|FBtr0078650|FBtr0078651|FBtr0078651|FBtr0078651|FBtr0302597|FBtr0302597|FBtr0302597|FBtr0309322|FBtr0309322|FBtr0309322|FBtr0078654|FBtr0078654|FBtr0078654|FBtr0309320|FBtr0309320|FBtr0309320|FBtr0078649|FBtr0078649|FBtr0078649|FBtr0301947|FBtr0301947|FBtr0301947|FBtr0078652|FBtr0078652|FBtr0078652|FBtr0309319|FBtr0309319|FBtr0309319 6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000424|6000424|6000424|6000429|6000429|6000429|6000429|6000429|6000429|6000424|6000424|6000424|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429 6003027|6003027|6003027|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6002635|6002635|6002635|6001162|6001162|6001162|6002646|6002646|6002646|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6003646|6003646|6003646 3R - 6000799 6000924 3'utr Rm62 FlyBase G48504.2 AAGTTATTTGACGCTGGCCGCGAGGTCGGTACAACACAATCCAATTGAGAACATCAAAAACACTTTACTTAAACGCAAAAACCAATTTTCAAATATCATGTGATAATTTCTTAATTTAACGCAACG 195 6000829 0.807415952 23 177 1847 0.918103448 1.629409599 0.043103448 0.174358974 0.306034483 195 15 4 213 3R:6000799-6000924 7 Rm62 FBtr0078654|FBtr0078654|FBtr0078654|FBtr0309320|FBtr0309320|FBtr0309320|FBtr0301947|FBtr0301947|FBtr0301947|FBtr0078649|FBtr0078649|FBtr0078649|FBtr0309319|FBtr0309319|FBtr0309319|FBtr0078652|FBtr0078652|FBtr0078652|FBtr0309321|FBtr0309321|FBtr0309321|FBtr0078650|FBtr0078650|FBtr0078650|FBtr0078651|FBtr0078651|FBtr0078651|FBtr0302597|FBtr0302597|FBtr0302597|FBtr0078653|FBtr0078653|FBtr0078653|FBtr0309322|FBtr0309322|FBtr0309322 6000429|6000429|6000429|6000424|6000424|6000424|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000424|6000424|6000424|6000429|6000429|6000429|6000429|6000429|6000429 6001162|6001162|6001162|6002646|6002646|6002646|6001162|6001162|6001162|6001162|6001162|6001162|6003646|6003646|6003646|6001162|6001162|6001162|6003027|6003027|6003027|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6002635|6002635|6002635 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 6000802 6000878 3'utr Rm62 FlyBase G36612.1 GAGAACATCAAAAACACTTTACTTAAACGCAAAAACCAATTTTCAAATATCATGTGATAATTTCTTAATTTAACGCA 138 6000830 0.776641012 15 123 1287 0.893939394 1.946943271 0.065656566 0.369565217 0.560606061 138 20 1 177 3R:6000802-6000878 7 145.5 2870 FBgn0003261 4149.96 168.6633333 258.5433333 0.035060579 0.86266527 0.56276833 3 4 3.5 0.2 dme-miR-1002-5p 6mer3-8 CTACTT 3R 6001037 6001042 - 3R_6001037_6001042_- 0.630105357 0.642337111 0.636221234 0.008649118 Rm62 FBtr0309321|FBtr0078653|FBtr0078650|FBtr0078651|FBtr0302597|FBtr0309322|FBtr0078654|FBtr0309320|FBtr0078649|FBtr0301947|FBtr0078652|FBtr0309319 6000429|6000429|6000429|6000429|6000424|6000429|6000429|6000424|6000429|6000429|6000429|6000429 6003027|6001162|6001162|6001162|6001162|6002635|6001162|6002646|6001162|6001162|6001162|6003646 3R - 6000934 6001232 3'utr Rm62 FlyBase G48505.1 GAGCAACGGACGAGGCTTCGGAGGAGGCGGCGGCGGCGGCGGCGAAGGCAGACACTCGCGCTTCGACTAGATCGCGGACAATTAGATGAGCAGTAAAAGAAGCTATAGGAACAGGAGATTTCAGTAGCTAAACTAAACCGCACTAGGTCCTAAGTTAAATTAAGTTCATAGCTTAAGTTAAGATTTCGTACTACTTTCACCAAACCGCTGACGGTTATTTTTAGACTTAAATTCAGACTCCCTGATTAATGAAACACTACAAAATGCGAGCTATTTGAACATAGCGAATTTATGTTTAA 348 6001037 0.983484194 54 331 2553 0.95754717 2.307496038 0.169811321 0.189655172 0.33490566 348 17 1 406 3R:6000934-6001232 6 Rm62 FBtr0078654|FBtr0309320|FBtr0301947|FBtr0078649|FBtr0309319|FBtr0078652|FBtr0309321|FBtr0078650|FBtr0078651|FBtr0302597|FBtr0078653|FBtr0309322 6000429|6000424|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000424|6000429|6000429 6001162|6002646|6001162|6001162|6003646|6001162|6003027|6001162|6001162|6001162|6001162|6002635 CTACTT 6mer3-8 dme-miR-1002-5p 3R - 6000888 6001190 3'utr Rm62 FlyBase G36612.2 CGAAGGCAGACACTCGCGCTTCGACTAGATCGCGGACAATTAGATGAGCAGTAAAAGAAGCTATAGGAACAGGAGATTTCAGTAGCTAAACTAAACCGCACTAGGTCCTAAGTTAAATTAAGTTCATAGCTTAAGTTAAGATTTCGTACTACTTTCACCAAACCGCTGACGGTTATTTTTAGACTTAAATTCAGACTCCCTGATTAATGAAACACTACAAAATGCGAGCTATTTGAACATAGCGAATTTATGTTTAAATGATTTGTAAGTTATTTGACGCTGGCCGCGAGGTCGGTACAACAC 251 6001037 0.92983781 46 229 1764 0.910994764 1.696481204 0.193717277 0.362549801 0.581151832 251 28 6 348 3R:6000888-6001190 6 129 2871 FBgn0003261 4149.96 168.6633333 258.5433333 0.031084637 0.76483725 0.498949241 -5 -5 -5 0.2 dme-miR-33-5p 6mer3-8 CAATGC 3R 6001604 6001609 - 3R_6001604_6001609_- 0.999999966 0.99809099 0.999045478 0.001349867 Rm62 FBtr0309321|FBtr0309322|FBtr0309320|FBtr0309319 6000429|6000429|6000424|6000429 6003027|6002635|6002646|6003646 3R - 6001560 6001646 5'utr Rm62 FlyBase G48507.1 ACACAAAGGGCACCTCTTTCGCCTTCTTCACCAAGAACAATGCCAAGCAAGCCAAGGCGCTGGTCGACGTACTCCGAGAAGCTAATC 19 6001606 0.950158793 9 17 77 0.863636364 1.278753601 0.045454545 0.157894737 0.272727273 19 3 0 19 3R:6001560-6001646 6 Rm62 FBtr0309320|FBtr0309319|FBtr0309321|FBtr0309322 6000424|6000429|6000429|6000429 6002646|6003646|6003027|6002635 CAATGC 6mer3-8 dme-miR-33-5p 3R - 6001570 6001652 5'utr Rm62 FlyBase G36613.1 GATCCAACACAAAGGGCACCTCTTTCGCCTTCTTCACCAAGAACAATGCCAAGCAAGCCAAGGCGCTGGTCGACGTACTCCGA 11 6001620 0.934921823 5 10 38 0.866666667 1.113943352 0.133333333 0.363636364 0.533333333 11 2 0 13 3R:6001570-6001652 6 6.5 2872 FBgn0003261 4149.96 168.6633333 258.5433333 0.00156628 0.038538311 0.025140853 -3 11 4 0.2 dme-miR-1012-3p 7mer-m8 TTGACTA 3R 6001700 6001706 - 3R_6001700_6001706_- 0.534666414 0.48912882 0.511897617 0.032199946 Rm62 FBtr0309321|FBtr0309322|FBtr0309320|FBtr0309319 6000429|6000429|6000424|6000429 6003027|6002635|6002646|6003646 3R - 6001688 6001735 5'utr Rm62 FlyBase G48508.1 CGTGGACGGCATCAAGTATGTCATCAACTTTGACTACCCGCAAAACAG 16 6001706 0.971660604 3 16 96 1 1.230448921 0.176470588 0.0625 0.117647059 16 0 0 17 3R:6001688-6001735 7 Rm62 FBtr0309320|FBtr0309319|FBtr0309321|FBtr0309322 6000424|6000429|6000429|6000429 6002646|6003646|6003027|6002635 TTGACTA 7mer-m8 dme-miR-1012-3p 3R - 6001690 6001734 5'utr Rm62 FlyBase G36614.1 GTGGACGGCATCAAGTATGTCATCAACTTTGACTACCCGCAAAAC 17 6001706 0.974502547 4 16 98 0.913043478 0.84509804 0.130434783 0.294117647 0.47826087 17 0 2 21 3R:6001690-6001734 7 16 2873 FBgn0003261 4149.96 168.6633333 258.5433333 0.003855459 0.094863535 0.061885177 0 0 0 0.2 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 6359603 6359608 + 3R_6359603_6359608_+ 0.833319695 0.999982251 0.916650973 0.117848255 Pak FBtr0334543|FBtr0334544|FBtr0081716|FBtr0334539|FBtr0334542|FBtr0081714|FBtr0334540|FBtr0081715|FBtr0334541 6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464 6361614|6361614|6360248|6360248|6361614|6360248|6360248|6360248|6360050 3R + 6359557 6359637 3'utr Pak FlyBase G40562.1 AACACCAACCACAATAGCAACAATAACTGTTATGCATACGAACAGATGATGAATTATTAATGATTATGAGTACTATTATTA 14 6359603 0.974891896 7 14 84 1 1.322219295 0.047619048 0.428571429 0.619047619 14 0 0 21 3R:6359557-6359637 6 Pak FBtr0081715|FBtr0334541|FBtr0081714|FBtr0334540|FBtr0334539|FBtr0334542|FBtr0334543|FBtr0334544|FBtr0081716 6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464 6360248|6360050|6360248|6360248|6360248|6361614|6361614|6361614|6360248 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R + 6359554 6359644 3'utr Pak FlyBase G30615.1 AACAACACCAACCACAATAGCAACAATAACTGTTATGCATACGAACAGATGATGAATTATTAATGATTATGAGTACTATTATTAATTATTT 7 6359603 0.97256129 5 7 48 1 1.079181246 0.083333333 0.571428571 0.75 7 0 0 12 3R:6359554-6359644 6 7 2874 FBgn0267698 1697.123333 60.89666667 93.02666667 0.004124627 0.11494882 0.075247241 0 0 0 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 6360006 6360013 + 3R_6360006_6360013_+ 0.591872384 0.596582204 0.594227294 0.003330332 Pak FBtr0334543|FBtr0334544|FBtr0081716|FBtr0334539|FBtr0334542|FBtr0081714|FBtr0334540|FBtr0081715|FBtr0334541 6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464 6361614|6361614|6360248|6360248|6361614|6360248|6360248|6360248|6360050 3R + 6359958 6360028 3'utr Pak FlyBase G40564.1 CACACACACTATAGTTGTCAACATTAAAACATTAGAATTTGTAACTCTTGCATTTAAAGGAAATGAAAATA 121 6360005 0.767290277 6 120 962 0.993710692 2.198657087 0.528301887 0.223140496 0.408805031 121 1 0 158 3R:6359958-6360028 8 Pak FBtr0081715|FBtr0334541|FBtr0081714|FBtr0334540|FBtr0334539|FBtr0334542|FBtr0334543|FBtr0334544|FBtr0081716 6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464 6360248|6360050|6360248|6360248|6360248|6361614|6361614|6361614|6360248 TGCATTTA 8mer-A1 dme-miR-277-3p 3R + 6359989 6360028 3'utr Pak FlyBase G30616.1 TTAGAATTTGTAACTCTTGCATTTAAAGGAAATGAAAATA 84 6360005 0.751355944 5 84 635 1 2.100370545 0.595238095 0.345238095 0.563492063 84 0 0 126 3R:6359989-6360028 8 100 2875 FBgn0267698 1697.123333 60.89666667 93.02666667 0.058923237 1.642126006 1.074960585 1 1 1 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3R 6387608 6387614 + 3R_6387608_6387614_+ 0.521133211 0.521209762 0.521171487 5.42E-05 godzilla FBtr0081721|FBtr0081720|FBtr0113198|FBtr0081722 6387311|6387311|6387311|6387311 6388304|6387789|6388304|6388304 3R + 6387555 6387641 3'utr godzilla FlyBase G40601.1 AATCCACACAGACACGATACACACACACGCGTCATTTATGTGCGTATAGAAATTGTGATTTATTTTATATACATTTTACAATTAACC 725 6387614 0.991288275 16 718 7646 0.992027335 2.4628969 0.002277904 0.172413793 0.316628702 725 5 2 871 3R:6387555-6387641 7 godzilla FBtr0081722|FBtr0113198|FBtr0081720|FBtr0081721 6387311|6387311|6387311|6387311 6388304|6388304|6387789|6388304 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 6387570 6387632 3'utr godzilla FlyBase G30642.1 GATACACACACACGCGTCATTTATGTGCGTATAGAAATTGTGATTTATTTTATATACATTTTA 452 6387614 0.991809986 15 435 4792 0.958778626 1.651831608 0 0.340707965 0.545038168 452 14 13 628 3R:6387570-6387632 7 585.5 2876 FBgn0037442 1202.333333 48.23 73.77 0.486969781 12.13974705 7.93683069 -6 -6 -6 0.2 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 3R 6387752 6387758 + 3R_6387752_6387758_+ 0.823334812 0.593453717 0.708394265 0.162550485 godzilla FBtr0081721|FBtr0081720|FBtr0113198|FBtr0081722 6387311|6387311|6387311|6387311 6388304|6387789|6388304|6388304 3R + 6387656 6387779 3'utr godzilla FlyBase G40602.1 CGAAATACAGCCTCGCCGGCAAACTCCCAACCAAAAATGTAAACGATAGATGGAAGAGAAAAAATACCAAGTTACCACATCTAAGATTAAATTGTTTACCTGATTCGCATGAATCTTTGATTCA 34 6387759 0.907605931 15 34 184 1 1.633468456 0.139534884 0.205882353 0.372093023 34 0 0 43 3R:6387656-6387779 7 godzilla FBtr0081722|FBtr0113198|FBtr0081720|FBtr0081721 6387311|6387311|6387311|6387311 6388304|6388304|6387789|6388304 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R + 6387664 6387765 3'utr godzilla FlyBase G30643.1 AGCCTCGCCGGCAAACTCCCAACCAAAAATGTAAACGATAGATGGAAGAGAAAAAATACCAAGTTACCACATCTAAGATTAAATTGTTTACCTGATTCGCAT 19 6387759 0.978322026 6 17 109 0.931034483 1.130333768 0.482758621 0.368421053 0.586206897 19 1 1 27 3R:6387664-6387765 7 12.5 2877 FBgn0037442 1202.333333 48.23 73.77 0.010396451 0.259174787 0.169445574 -7 -7 -7 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 6656385 6656390 - 3R_6656385_6656390_- 0.795072313 0.994926951 0.894999632 0.141318614 CG1307 FBtr0346140|FBtr0346140|FBtr0346140|FBtr0301623|FBtr0301623|FBtr0301623|FBtr0339933|FBtr0339933|FBtr0339933 6656028|6656028|6656028|6656288|6656288|6656288|6656288|6656288|6656288 6656521|6656521|6656521|6656521|6656521|6656521|6656521|6656521|6656521 3R - 6656357 6656412 3'utr CG1307 FlyBase G48589.2 AAGGCCACCGGGTGGAGGACGACTGTGACATGCAAGCTAAGCTAAGATTTACGTTA 39 6656383 0.817325859 3 37 131 0.977272727 1.33243846 0.431818182 0.102564103 0.204545455 39 0 1 43 3R:6656357-6656412 6 CG1307 FBtr0339933|FBtr0339933|FBtr0339933|FBtr0346140|FBtr0346140|FBtr0346140|FBtr0301623|FBtr0301623|FBtr0301623 6656288|6656288|6656288|6656028|6656028|6656028|6656288|6656288|6656288 6656521|6656521|6656521|6656521|6656521|6656521|6656521|6656521|6656521 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 6656367 6656412 3'utr CG1307 FlyBase G36665.1 AAGGCCACCGGGTGGAGGACGACTGTGACATGCAAGCTAAGCTAAG 23 6656385 0.755450089 3 23 73 1 1.51851394 0.454545455 0.347826087 0.545454545 23 0 0 33 3R:6656367-6656412 6 30 2878 FBgn0026566 301 40.07666667 61.29666667 0.099667774 0.74856525 0.489423025 -7 -5 -6 0.2 dme-miR-965-3p 7mer-m8 TACGCTT 3R 7088652 7088658 + 3R_7088652_7088658_+ 0.619560745 0.615658752 0.617609748 0.00275906 alphaTub84B FBtr0081639 7088582 7088839 3R + 7088590 7088691 3'utr alphaTub84B FlyBase G40713.1 CGCCACTTCAACGCTCGATGGGAGCGTCATTGGTGGGCGGGGTAACCGTCGAAATCAGTGTTTACGCTTCCAATCGCAACAAAAAATTCACTGCAACACTGA 27 7088651 0.787850221 12 25 138 0.967741935 1.477121255 0.225806452 0.148148148 0.258064516 27 1 0 30 3R:7088590-7088691 7 alphaTub84B FBtr0081639 7088582 7088839 TACGCTT 7mer-m8 dme-miR-965-3p 3R + 7088620 7088664 3'utr alphaTub84B FlyBase G30737.1 TGGTGGGCGGGGTAACCGTCGAAATCAGTGTTTACGCTTCCAATC 8 7088651 0.741372395 4 8 47 1 1.041392685 0.090909091 0.375 0.545454545 8 0 0 11 3R:7088620-7088664 7 10 2879 FBgn0003884 10969.09667 757.73 1153.946667 0.000911652 0.013197313 0.008665912 1 1 1 0.2 dme-miR-8-3p 6mer2-7 AGTATT 3R 7088733 7088738 + 3R_7088733_7088738_+ 0.888179934 0.56325352 0.725716727 0.229757661 alphaTub84B FBtr0081639 7088582 7088839 3R + 7088711 7088840 3'utr alphaTub84B FlyBase G40714.1 AAGATTGTACGAGAAACCATAAAGTATTTTATCCACAAAGACACGTATAGCAGAAAAGCCAAGTTAACTCGGCGATAAGTTGTGTACACAAGAATAAAATCGGCCAGATTCAGTGTTGTCAGAAATAAGA 95 7088739 0.829249804 18 90 530 0.96031746 1.781755375 0.174603175 0.2 0.396825397 95 4 1 121 3R:7088711-7088840 6 alphaTub84B FBtr0081639 7088582 7088839 AGTATT 6mer2-7 dme-miR-8-3p 3R + 7088715 7088836 3'utr alphaTub84B FlyBase G30738.1 TTGTACGAGAAACCATAAAGTATTTTATCCACAAAGACACGTATAGCAGAAAAGCCAAGTTAACTCGGCGATAAGTTGTGTACACAAGAATAAAATCGGCCAGATTCAGTGTTGTCAGAAAT 52 7088739 0.965984233 13 49 290 0.961038961 1.86923172 0.142857143 0.365384615 0.571428571 52 3 0 74 3R:7088715-7088836 6 42.5 2880 FBgn0003884 10969.09667 757.73 1153.946667 0.003874521 0.05608858 0.036830125 -6 -6 -6 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 7097964 7097971 - 3R_7097964_7097971_- 0.6024843 0.613251563 0.607867932 0.007613631 Alh FBtr0334672|FBtr0081613|FBtr0081612|FBtr0113200|FBtr0334677|FBtr0081614|FBtr0334673 7097681|7097681|7097681|7097681|7097681|7097681|7097681 7098310|7098310|7098310|7098310|7098310|7098310|7098310 3R - 7097949 7098053 3'utr Alh FlyBase G48633.2 AAATAATGTACATATATACATACACAGCTGTAAATCAAATTACAGATTGTTGCACAAAAGCAGTGATTGAGAAATTATCCATTGCATTTATCGACTACATTGACA 94 7097972 0.80524409 11 93 737 0.973913043 2.049218023 0.252173913 0.170212766 0.32173913 94 3 0 112 3R:7097949-7098053 8 Alh FBtr0334673|FBtr0334677|FBtr0081614|FBtr0081612|FBtr0113200|FBtr0334672|FBtr0081613 7097681|7097681|7097681|7097681|7097681|7097681|7097681 7098310|7098310|7098310|7098310|7098310|7098310|7098310 TGCATTTA 8mer-A1 dme-miR-277-3p 3R - 7097947 7098012 3'utr Alh FlyBase G36708.1 ACAGATTGTTGCACAAAAGCAGTGATTGAGAAATTATCCATTGCATTTATCGACTACATTGACAAC 68 7097972 0.772359325 9 64 524 0.962962963 1.716003344 0.25 0.411764706 0.62962963 68 3 1 104 3R:7097947-7098012 8 65 2881 FBgn0261238 489.5366667 11.73666667 17.96333333 0.132778614 5.538199375 3.618482093 1 1 1 0.2 dme-miR-1006-3p 6mer2-7 GAATTT 3R 7126736 7126741 - 3R_7126736_7126741_- 0.602499351 0.987344374 0.794921862 0.272126509 CG10068 FBtr0081611 7126269 7126771 3R - 7126705 7126756 3'utr CG10068 FlyBase G48646.1 AATTAATGTGAAAATGAATTTGTATCTCGCTGTATCTGAATAATTTCTAACT 20 7126736 0.903672223 7 19 173 0.958333333 1.361727836 0.333333333 0.2 0.333333333 20 1 0 23 3R:7126705-7126756 6 CG10068 FBtr0081611 7126269 7126771 GAATTT 6mer2-7 dme-miR-1006-3p 3R - 7126707 7126760 3'utr CG10068 FlyBase G36713.1 GGTCAATTAATGTGAAAATGAATTTGTATCTCGCTGTATCTGAATAATTTCTAA 8 7126726 0.983427133 6 8 65 1 1 0.3 0.25 0.4 8 0 0 10 3R:7126707-7126760 6 12.5 2882 FBgn0037473 157.0666667 11.75666667 18.12 0.079584041 1.063226538 0.689845475 -5 -15 -10 0.2 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3R 7184145 7184151 - 3R_7184145_7184151_- 0.616127392 0.530246671 0.573187032 0.060726825 CG10055 FBtr0081605 7184099 7184593 3R - 7184126 7184288 3'utr CG10055 FlyBase G48673.1 ACTTCGATTATAATTACACATACAAGTAAATCAGAACTTTAGCATTTAGTATGGCATTAGAGTATGAAACATTTGAATTTTGAATTCTGAAAAGCGAAATCTAGTTGTGCATTTGTATATACATCTATCGATATTGTTGGTGCTGCAAGCAAAGAAAACAAAA 34 7184152 0.975699461 20 33 221 1 1.602059991 0.2 0.147058824 0.275 34 0 0 40 3R:7184126-7184288 7 CG10055 FBtr0081605 7184099 7184593 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3R - 7184109 7184166 3'utr CG10055 FlyBase G36734.1 ATCTATCGATATTGTTGGTGCTGCAAGCAAAGAAAACAAAATATGAATAAAATAAAAT 12 7184152 0.980778745 4 12 83 1 1.204119983 0.4375 0.25 0.4375 12 0 0 16 3R:7184109-7184166 7 14 2883 FBgn0037482 992.8933333 50.03666667 76.9 0.014100205 0.279794817 0.182054616 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 7194832 7194838 + 3R_7194832_7194838_+ 0.574170505 0.622089095 0.5981298 0.033883567 lap FBtr0305153|FBtr0305153|FBtr0305153 7194510|7194510|7194510 7195358|7195358|7195358 3R + 7194794 7194843 3'utr lap FlyBase G40755.1 GGAAAAAAGTATTTAATGTGTGTTTCATGTGATAACTGTGTGATAACTAT 6 7194829 0.989990095 4 5 45 0.9 0.653212514 0.1 0.333333333 0.6 6 0 1 9 3R:7194794-7194843 7 lap FBtr0305153|FBtr0305153|FBtr0305153 7194510|7194510|7194510 7195358|7195358|7195358 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 7194810 7194843 3'utr lap FlyBase G30764.1 TGTGTGTTTCATGTGATAACTGTGTGATAACTAT 5 7194830 0.97987106 3 5 40 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 3R:7194810-7194843 7 5 2884 FBgn0086372 620.47 21.26666667 32.51 0.008058407 0.235109718 0.153798831 3 2 2.5 0.2 dme-miR-79-3p 7mer-A1 AGCTTTA 3R 7495031 7495037 - 3R_7495031_7495037_- 0.451069173 0.806305313 0.628687243 0.251189855 alpha-Est9 FBtr0302354|FBtr0302355 7494095|7493919 7495070|7495070 3R - 7495007 7495088 stop_codon alpha-Est9 FlyBase G48711.1 CGCGATGAGCTGTTGTAGGGATCTGCAGGAATCCATTTAGGCTAGACATGCAGCTTTAATAGTACAAGGGTGGGGGTCACAT 44 7495030 0.750769538 9 44 260 1 1.72427587 0.150943396 0.204545455 0.339622642 44 0 0 53 3R:7495007-7495088 7 alpha-Est9 FBtr0302355|FBtr0302354 7493919|7494095 7495070|7495070 AGCTTTA 7mer-A1 dme-miR-79-3p 3R - 7495000 7495110 stop_codon alpha-Est9 FlyBase G36764.1 GGTCTGGGAGAGTTTCTTTCGACGCGATGAGCTGTTGTAGGGATCTGCAGGAATCCATTTAGGCTAGACATGCAGCTTTAATAGTACAAGGGTGGGGGTCACATTTGGAGA 33 7495031 0.97739308 10 29 192 0.916666667 1.166331422 0.145833333 0.333333333 0.541666667 33 2 2 44 3R:7495000-7495110 7 28.5 2885 FBgn0015577 852.0066667 30.18666667 46.17 0.033450442 0.944125442 0.617283951 -7 -6 -6.5 0.2 dme-miR-92b-3p 7mer-m1 TGCAATT 3R 7519662 7519668 - 3R_7519662_7519668_- 0.76558434 0.76558664 0.76558549 1.63E-06 alpha-Est7 FBtr0081550 7519561 7519750 3R - 7519642 7519730 3'utr alpha-Est7 FlyBase G48721.1 CAGCCTAACAAAGAAGTCTCTAGAAACTGTAAATAGGTCAAAATGCTTTATAAAATATATTCTGCAATTGGATTGTTTTGCTTTATAAC 41 7519680 0.818083473 13 39 298 0.96 1.380211242 0.06 0.219512195 0.36 41 1 1 48 3R:7519642-7519730 7 alpha-Est7 FBtr0081550 7519561 7519750 TGCAATT 7mer-m1 dme-miR-92b-3p 3R - 7519614 7519734 3'utr alpha-Est7 FlyBase G36770.1 TGTACAGCCTAACAAAGAAGTCTCTAGAAACTGTAAATAGGTCAAAATGCTTTATAAAATATATTCTGCAATTGGATTGTTTTGCTTTATAACTAGTTTGCCCAATGATTGCATGTGGATG 28 7519682 0.982265086 12 27 210 1 1.612783857 0.097560976 0.25 0.487804878 28 0 0 41 3R:7519614-7519734 7 7.5 2886 FBgn0015575 416.1433333 24.78333333 37.7 0.018022636 0.30262273 0.198938992 12 14 13 0.2 dme-miR-34-5p 7mer-m8 CACTGCC 3R 7857595 7857601 - 3R_7857595_7857601_- 0.708942528 0.708730905 0.708836716 0.000149624 CG17816 FBtr0333829|FBtr0113202 7855585|7855580 7858911|7858173 3R - 7857585 7857611 3'utr CG17816 FlyBase G48753.1 AAGACACTTTCACTGCCTGAACCCAAT 6 7857594 0.904793495 3 6 25 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 3R:7857585-7857611 7 CG17816 FBtr0113202|FBtr0333829 7855580|7855585 7858173|7858911 CACTGCC 7mer-m8 dme-miR-34-5p 3R - 7857586 7857611 3'utr CG17816 FlyBase G36796.1 AAGACACTTTCACTGCCTGAACCCAA 5 7857594 0.941084292 2 4 19 0.818181818 0.954242509 0.181818182 0.8 0.909090909 5 2 0 9 3R:7857586-7857611 7 5.5 2887 FBgn0037525 90 2.533333333 3.903333333 0.061111111 2.171052632 1.409052092 -7 -7 -7 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 7916011 7916016 + 3R_7916011_7916016_+ 0.966757829 0.999926425 0.983342127 0.023453742 CG2678 FBtr0304703 7915277 7916550 3R + 7915987 7916040 3'utr CG2678 FlyBase G40816.1 ATCGCCAACATCATCTTAAAAAATGTACCTATTGTTCCGAGGAGTTCAAAACAG 20 7916010 0.855888185 5 20 173 1 1.361727836 0.130434783 0.15 0.260869565 20 0 0 23 3R:7915987-7916040 6 CG2678 FBtr0304703 7915277 7916550 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 7915992 7916039 3'utr CG2678 FlyBase G30806.1 CAACATCATCTTAAAAAATGTACCTATTGTTCCGAGGAGTTCAAAACA 9 7916010 0.803827853 4 9 66 1 1.176091259 0.133333333 0.222222222 0.533333333 9 0 0 15 3R:7915992-7916039 6 14.5 2888 FBgn0014931 371 24.70666667 37.91 0.039083558 0.586886131 0.382484832 1 1 1 0.2 dme-miR-283-5p 6mer3-8 TGATAT 3R 7916757 7916762 - 3R_7916757_7916762_- 0.950896472 0.978428648 0.96466256 0.019468135 CG10445 FBtr0304704 7916597 7916927 3R - 7916700 7916813 3'utr CG10445 FlyBase G48777.1 CAATTGTGTATTAATACTACACAGACTACCTTTAACGTTATACGTTACATTTGATATAGTCGCACGTCCATAAAGCATAAAGCATATATATTCCCTTTTTTTCTATATTAAGAA 67 7916757 0.969975107 12 65 373 0.974025974 1.574031268 0.402597403 0.119402985 0.233766234 67 1 1 75 3R:7916700-7916813 6 CG10445 FBtr0304704 7916597 7916927 TGATAT 6mer3-8 dme-miR-283-5p 3R - 7916723 7916798 3'utr CG10445 FlyBase G36818.1 ACTACACAGACTACCTTTAACGTTATACGTTACATTTGATATAGTCGCACGTCCATAAAGCATAAAGCATATATAT 41 7916757 0.815368837 7 38 216 0.949152542 1.447158031 0.288135593 0.243902439 0.474576271 41 2 1 56 3R:7916723-7916798 6 45.5 2889 FBgn0037531 329.1333333 12.96 20.04666667 0.138241847 3.510802469 2.269704024 -5 -5 -5 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 3R 7916841 7916847 - 3R_7916841_7916847_- 0.656606014 0.671786824 0.664196419 0.010734447 CG10445 FBtr0304704 7916597 7916927 3R - 7916823 7916853 3'utr CG10445 FlyBase G48778.1 AATTTCACCAAAGTGTTTTTTAACGGATTGA 13 7916835 0.626213475 4 13 121 1 1.176091259 0 0.076923077 0.2 13 0 0 15 3R:7916823-7916853 7 CG10445 FBtr0304704 7916597 7916927 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 7916815 7916857 3'utr CG10445 FlyBase G36819.1 TTACAATTTCACCAAAGTGTTTTTTAACGGATTGAATTCGTTT 9 7916838 0.862477825 5 7 76 1 1.079181246 0 0.333333333 0.5 9 0 0 12 3R:7916815-7916857 7 9.5 2890 FBgn0037531 329.1333333 12.96 20.04666667 0.028863682 0.733024691 0.473894247 -12 -9 -10.5 0.2 dme-miR-276a-3p 6mer2-7 GTTCCT 3R 8004459 8004464 + 3R_8004459_8004464_+ 0.884618128 0.397739799 0.641178963 0.344274948 CG2698 FBtr0308075 8003875 8005719 3R + 8004435 8004482 3'utr CG2698 FlyBase G40845.1 TACGGTTTTCGGGGCCCGGATTGTGTTCCTGCCGTCCGCCTTGGCAGC 20 8004455 0.813994194 4 18 131 0.958333333 1.06069784 0.208333333 0.15 0.291666667 20 0 1 23 3R:8004435-8004482 6 CG2698 FBtr0308075 8003875 8005719 GTTCCT 6mer2-7 dme-miR-276a-3p 3R + 8004394 8004473 3'utr CG2698 FlyBase G30830.1 AGGTGCTCCACCTTTACGGGTCTGTTCACCTGGTTAGTCCATACGGTTTTCGGGGCCCGGATTGTGTTCCTGCCGTCCGC 8 8004455 0.977426509 5 8 56 1 1 0.1 0.25 0.4 8 0 0 10 3R:8004394-8004473 6 10.5 2891 FBgn0037536 142.6833333 5.336666667 8.11 0.073589534 1.9675203 1.294697904 4 4 4 0.2 dme-miR-1008-3p 7mer-m8 AGCTGTG 3R 8005344 8005350 + 3R_8005344_8005350_+ 0.6717832 0.671777326 0.671780263 4.17E-06 CG2698 FBtr0335228|FBtr0308075|FBtr0335225|FBtr0335226|FBtr0081784 8005015|8003875|8005283|8005283|8005283 8005719|8005719|8005719|8005719|8005719 3R + 8005300 8005428 3'utr CG2698 FlyBase G40847.1 AAACTACGAATTTCCTTTTAATACTCGAACTGCGAACTAACATAAGCTGTGTGGCCAAATACCTGACAATCAAAATGAGATTGGCCCGAATATCATAACCTAGACATAGGCTGGAGCTTCCTTTAACTA 55 8005351 0.956982528 12 52 248 0.9375 1.176091259 0.03125 0.163636364 0.28125 55 1 3 60 3R:8005300-8005428 7 CG2698 FBtr0081784|FBtr0335225|FBtr0335226|FBtr0335228|FBtr0308075 8005283|8005283|8005283|8005015|8003875 8005719|8005719|8005719|8005719|8005719 AGCTGTG 7mer-m8 dme-miR-1008-3p 3R + 8005315 8005390 3'utr CG2698 FlyBase G30831.1 TTTTAATACTCGAACTGCGAACTAACATAAGCTGTGTGGCCAAATACCTGACAATCAAAATGAGATTGGCCCGAAT 39 8005351 0.956495156 10 36 170 0.93877551 1.361727836 0 0.230769231 0.387755102 39 2 1 46 3R:8005315-8005390 7 31.5 2892 FBgn0037536 142.6833333 5.336666667 8.11 0.220768602 5.902560899 3.884093711 -7 -7 -7 0.2 dme-miR-184-3p 6mer3-8 TCCGTC 3R 8005499 8005504 + 3R_8005499_8005504_+ 0.839886624 0.818852562 0.829369593 0.014873284 CG2698 FBtr0335228|FBtr0308075|FBtr0335225|FBtr0335226|FBtr0081784 8005015|8003875|8005283|8005283|8005283 8005719|8005719|8005719|8005719|8005719 3R + 8005474 8005526 3'utr CG2698 FlyBase G40848.1 TGATTTTTATGATATTATTCAATATTCCGTCTATGCAGCAAGCGCTCCTTAAT 206 8005498 0.764296872 9 196 1633 0.976095618 1.91204483 0.262948207 0.180487805 0.330677291 205 4 2 245 3R:8005474-8005526 6 CG2698 FBtr0081784|FBtr0335225|FBtr0335226|FBtr0335228|FBtr0308075 8005283|8005283|8005283|8005015|8003875 8005719|8005719|8005719|8005719|8005719 TCCGTC 6mer3-8 dme-miR-184-3p 3R + 8005475 8005527 3'utr CG2698 FlyBase G30833.1 GATTTTTATGATATTATTCAATATTCCGTCTATGCAGCAAGCGCTCCTTAATA 164 8005498 0.744289014 6 159 1264 0.9765625 2.397940009 0.22265625 0.417177914 0.62890625 163 6 0 250 3R:8005475-8005527 6 178 2893 FBgn0037536 142.6833333 5.336666667 8.11 1.247517813 33.35415365 21.94821208 1 1 1 0.2 dme-miR-79-3p 6mer3-8 TAGCTT 3R 8011031 8011036 - 3R_8011031_8011036_- 0.989648957 0.684788511 0.837218734 0.215568927 CG10435 FBtr0081820 8010905 8011108 3R - 8011002 8011087 3'utr CG10435 FlyBase G48808.1 TGTACGGCCGGCTTTTACCCCCATGCCCAAACTCCGCAATCCCACCCCAATTAGCTTACAAAGATGACTCCTCTAAACGTATATTT 17 8011037 0.922857619 9 16 85 1 1.397940009 0.08 0.235294118 0.48 17 0 0 25 3R:8011002-8011087 6 CG10435 FBtr0081820 8010905 8011108 TAGCTT 6mer3-8 dme-miR-79-3p 3R - 8010999 8011039 3'utr CG10435 FlyBase G36840.1 AATTAGCTTACAAAGATGACTCCTCTAAACGTATATTTAAT 11 8011023 0.764027289 3 10 73 0.941176471 0.903089987 0 0.272727273 0.529411765 11 0 1 16 3R:8010999-8011039 6 9 2894 FBgn0037539 188.4766667 12.81 19.71666667 0.047751269 0.702576112 0.45646661 1 -13 -6 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 8036608 8036615 + 3R_8036608_8036615_+ 0.482741441 0.484091274 0.483416357 0.000954523 unc-45 FBtr0081788 8036503 8036652 3R + 8036596 8036633 3'utr unc-45 FlyBase G40867.1 AAAATATCAAATGTACTTAACTGTTTTATAAATATTGT 57 8036607 0.861064477 3 57 512 1 1.857332496 0.097222222 0.192982456 0.361111111 57 0 0 72 3R:8036596-8036633 8 unc-45 FBtr0081788 8036503 8036652 GTACTTAA 8mer-A1 dme-miR-252-5p 3R + 8036596 8036632 3'utr unc-45 FlyBase G30845.1 AAAATATCAAATGTACTTAACTGTTTTATAAATATTG 30 8036607 0.850857656 3 30 266 1 1.612783857 0.195121951 0.266666667 0.463414634 30 0 0 41 3R:8036596-8036632 8 43.5 2895 FBgn0010812 498 18.51666667 28.27333333 0.087349398 2.349234923 1.538552228 1 1 1 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 3R 8121526 8121531 + 3R_8121526_8121531_+ 0.999936217 0.976913663 0.98842494 0.016279366 puc FBtr0081792|FBtr0339722 8121334|8121334 8122294|8122294 3R + 8121515 8121562 3'utr puc FlyBase G40882.2 AAGGAATTTTTTACCTGGCTGAAAAAATTTAGATTTTATTAAGTCAGA 26 8121526 0.683281508 9 23 210 0.90625 1.161368002 0.15625 0.115384615 0.28125 26 2 1 29 3R:8121515-8121562 6 puc FBtr0081792|FBtr0339722 8121334|8121334 8122294|8122294 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 3R + 8121506 8121594 3'utr puc FlyBase G30855.1 ACTGAAACTAAGGAATTTTTTACCTGGCTGAAAAAATTTAGATTTTATTAAGTCAGAAACGGCGAGAGGGCTGATACTTCCTATTAAAC 15 8121530 0.983019731 7 14 107 0.95 1.278753601 0.1 0.333333333 0.5 15 1 0 19 3R:8121506-8121594 6 16.5 2896 FBgn0243512 1835.12 76.61666667 117.5466667 0.008991238 0.215357842 0.140369782 0 -4 -2 0.2 dme-miR-980-3p 6mer2-7 GCAGCT 3R 8121709 8121714 + 3R_8121709_8121714_+ 0.927242978 0.978474391 0.952858685 0.03622607 puc FBtr0081792|FBtr0339722 8121334|8121334 8122294|8122294 3R + 8121640 8121751 3'utr puc FlyBase G40883.1 ATAAAAACGTTCAATATCTGTACATACAAACGTACCTAAAACAAAACACAAGGGAAAGAAATACCAATTGCAGCTTAAACTATGTACTTGCAATACCTTTTAAGAGCTTTTG 101 8121707 0.801135091 13 99 543 0.982905983 2.06069784 0.076923077 0.148514851 0.264957265 101 2 0 115 3R:8121640-8121751 6 puc FBtr0081792|FBtr0339722 8121334|8121334 8122294|8122294 GCAGCT 6mer2-7 dme-miR-980-3p 3R + 8121688 8121746 3'utr puc FlyBase G30857.1 CAAGGGAAAGAAATACCAATTGCAGCTTAAACTATGTACTTGCAATACCTTTTAAGAGC 56 8121707 0.802543346 7 53 288 1 1.908485019 0.024691358 0.303571429 0.518518519 56 0 0 81 3R:8121688-8121746 6 63 2897 FBgn0243512 1835.12 76.61666667 117.5466667 0.03433018 0.822275397 0.53595735 2 2 2 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 3R 8122148 8122153 + 3R_8122148_8122153_+ 0.691366896 0.996128764 0.84374783 0.215499206 puc FBtr0081792|FBtr0339722 8121334|8121334 8122294|8122294 3R + 8122096 8122210 3'utr puc FlyBase G40887.1 TCCGCTATAGCCACTCTAATAGTTTAGTTACTTCTTGAAAGTGAAAAAAGTTTGTGTTTTCTAGTTTTAATTATTTATATGAAGCGAGTGTGTGAGAGGATTATGATTCATTTCG 53 8122147 0.983405532 19 50 439 0.953125 1.785329835 0.234375 0.150943396 0.296875 53 3 0 61 3R:8122096-8122210 6 puc FBtr0081792|FBtr0339722 8121334|8121334 8122294|8122294 TGTGTT 6mer3-8 dme-miR-317-3p 3R + 8122123 8122168 3'utr puc FlyBase G30860.1 TTACTTCTTGAAAGTGAAAAAAGTTTGTGTTTTCTAGTTTTAATTA 6 8122146 0.986585453 4 6 59 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3R:8122123-8122168 6 13 2898 FBgn0243512 1835.12 76.61666667 117.5466667 0.007084005 0.169675876 0.110594374 1 2 1.5 0.2 dme-miR-31a-5p 7mer-A1 CTTGCCA 3R 8125187 8125193 + 3R_8125187_8125193_+ 0.809042132 0.818436073 0.813739103 0.006642561 CG7878 FBtr0113205 8125137 8125273 3R + 8125168 8125217 3'utr CG7878 FlyBase G40902.1 CTAGAGCGCATTGAAGTGCCTTGCCAAAAATTGTTTAACTATTTATCTAT 27 8125189 0.869886937 2 26 202 0.96875 1.491361694 0.0625 0.148148148 0.28125 27 1 0 31 3R:8125168-8125217 7 CG7878 FBtr0113205 8125137 8125273 CTTGCCA 7mer-A1 dme-miR-31a-5p 3R + 8125153 8125215 3'utr CG7878 FlyBase G30869.1 TCTAGTTATAAGAGACTAGAGCGCATTGAAGTGCCTTGCCAAAAATTGTTTAACTATTTATCT 23 8125189 0.981144917 5 21 155 0.972222222 1.544068044 0.111111111 0.391304348 0.611111111 23 1 0 35 3R:8125153-8125215 7 24 2899 FBgn0037549 1708.053333 87.89666667 135.3866667 0.014051083 0.273047897 0.177270041 -2 -2 -2 0.2 dme-miR-277-3p 7mer-m8 TGCATTT 3R 8237390 8237396 - 3R_8237390_8237396_- 0.619928073 0.61946472 0.619696397 0.000327673 Ada2b FBtr0334315|FBtr0081807|FBtr0100368 8236630|8237112|8237112 8237918|8237918|8237437 3R - 8237369 8237410 3'utr Ada2b FlyBase G48853.1 GATTAAGAGCCACATGCATTTCCAAGGACTTCACTTTATTTT 13 8237394 0.985746298 6 9 76 0.714285714 1 0.071428571 0.076923077 0.142857143 13 4 0 10 3R:8237369-8237410 7 Ada2b FBtr0100368|FBtr0081807|FBtr0334315 8237112|8237112|8236630 8237437|8237918|8237918 TGCATTT 7mer-m8 dme-miR-277-3p 3R - 8237375 8237408 3'utr Ada2b FlyBase G36877.1 TTAAGAGCCACATGCATTTCCAAGGACTTCACTT 7 8237395 0.882334126 3 6 40 0.909090909 1 0.090909091 0.428571429 0.636363636 7 1 0 10 3R:8237375-8237408 7 9 2900 FBgn0037555 444.2066667 24.31 37.33666667 0.02026084 0.370218017 0.241049906 -2 -1 -1.5 0.2 dme-miR-14-3p 7mer-m8 AAGACTG 3R 8237527 8237533 - 3R_8237527_8237533_- 0.67179583 0.671795709 0.67179577 7.07E-08 Ada2b FBtr0334315|FBtr0081807 8236630|8237112 8237918|8237918 3R - 8237471 8237558 3'utr Ada2b FlyBase G48854.1 TACGCCCACCACCTACCTCTCGGTTAAGACTGTCTGCTTGAGCGGAGCACCATCGTTGGGTAGTCCTATGGAGACTTCGCTGCGCAAG 34 8237534 0.946006529 12 30 235 0.880952381 1.568201724 0.119047619 0.205882353 0.357142857 34 5 0 37 3R:8237471-8237558 7 Ada2b FBtr0081807|FBtr0334315 8237112|8236630 8237918|8237918 AAGACTG 7mer-m8 dme-miR-14-3p 3R - 8237473 8237596 3'utr Ada2b FlyBase G36878.1 AGTCACAACGAGCTGGATCTGTGCAAGAAGCATAATATTACGCCCACCACCTACCTCTCGGTTAAGACTGTCTGCTTGAGCGGAGCACCATCGTTGGGTAGTCCTATGGAGACTTCGCTGCGCA 24 8237534 0.983305192 15 18 137 0.75 1.079181246 0.28125 0.25 0.4375 24 7 1 24 3R:8237473-8237596 7 21 2901 FBgn0037555 444.2066667 24.31 37.33666667 0.047275292 0.86384204 0.562449781 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 8240818 8240824 - 3R_8240818_8240824_- 0.78833356 0.794717288 0.791525424 0.004513958 CG9636 FBtr0081806|FBtr0081806|FBtr0081806 8240745|8240745|8240745 8242389|8242389|8242389 3R - 8240810 8240850 3'utr CG9636 FlyBase G48864.1 ATTTTATATATATTAATATTATTTTTTGTGATAATTTAAAA 19 8240826 0.616078792 6 17 260 0.913043478 0.84509804 0 0.210526316 0.347826087 19 0 2 21 3R:8240810-8240850 7 CG9636 FBtr0081806|FBtr0081806|FBtr0081806 8240745|8240745|8240745 8242389|8242389|8242389 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 8240804 8240850 3'utr CG9636 FlyBase G36884.1 ATTTTATATATATTAATATTATTTTTTGTGATAATTTAAAAAAGGCA 18 8240827 0.6500114 8 15 242 0.769230769 1 0 0.333333333 0.538461538 18 5 1 20 3R:8240804-8240850 7 18 2902 FBgn0037556 751.8933333 33.43666667 51.34666667 0.023939566 0.538331173 0.350558297 2 3 2.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 8241671 8241676 - 3R_8241671_8241676_- 0.999049659 0.995819977 0.997434818 0.002283743 CG9636 FBtr0081806|FBtr0081806|FBtr0081806|FBtr0306301|FBtr0306301|FBtr0306301 8240745|8240745|8240745|8240907|8240907|8240907 8242389|8242389|8242389|8242389|8242389|8242389 3R - 8241497 8241752 3'utr CG9636 FlyBase G48870.1 TATGACGACTGGGGTCGCGCCTGCGCTGTGACTTTTCCTTAGTTCCTTACGCAAGCGAATTCAAATCGAACCGTATCTGTGAAAATCGTGAATCTCAAACTCTTGAATGTCCTCGAACAGTATTGTTAAACATACTTCAGTCCCTAGGATCAGACGCAGGTGCGACACCAAAACCGAATTTGGCGCTCAAATAGACTTATTTAGACGTTTTTAGGTACTCGAATTGATAAATTTTGTTGGCCGTGTGCGTGTTTTT 281 8241677 0.826200735 33 269 1838 0.961538462 2.511883361 0.25739645 0.163701068 0.304733728 281 13 0 325 3R:8241497-8241752 6 CG9636 FBtr0081806|FBtr0081806|FBtr0081806|FBtr0306301|FBtr0306301|FBtr0306301 8240745|8240745|8240745|8240907|8240907|8240907 8242389|8242389|8242389|8242389|8242389|8242389 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 8241535 8241777 3'utr CG9636 FlyBase G36887.1 TCTGTTTCCGTTGCCAGTCGTCAATTATGACGACTGGGGTCGCGCCTGCGCTGTGACTTTTCCTTAGTTCCTTACGCAAGCGAATTCAAATCGAACCGTATCTGTGAAAATCGTGAATCTCAAACTCTTGAATGTCCTCGAACAGTATTGTTAAACATACTTCAGTCCCTAGGATCAGACGCAGGTGCGACACCAAAACCGAATTTGGCGCTCAAATAGACTTATTTAGACGTTTTTAGGTAC 190 8241677 0.823370133 28 181 1149 0.944029851 1.925999266 0.291044776 0.315789474 0.514925373 190 13 2 253 3R:8241535-8241777 6 111 2903 FBgn0037556 751.8933333 33.43666667 51.34666667 0.147627323 3.319708902 2.161776162 1 1 1 0.2 dme-miR-307a-3p 6mer3-8 GGTTGT 3R 8262256 8262261 - 3R_8262256_8262261_- 0.969850032 0.905969374 0.937909703 0.045170405 RpA-70 FBtr0081867 8262118 8262361 3R - 8262237 8262286 3'utr RpA-70 FlyBase G48886.1 ACGTTATTTCCAAATATTGTGAATGGGTTGTTATTCAGCTACGCTTCCCT 157 8262270 0.734602452 7 152 1447 0.965714286 1.449735454 0.057142857 0.108280255 0.2 157 1 5 169 3R:8262237-8262286 6 RpA-70 FBtr0081867 8262118 8262361 GGTTGT 6mer3-8 dme-miR-307a-3p 3R - 8262232 8262292 3'utr RpA-70 FlyBase G36896.1 TTACATACGTTATTTCCAAATATTGTGAATGGGTTGTTATTCAGCTACGCTTCCCTTAATT 86 8262270 0.704613687 9 80 780 0.935483871 1.161368002 0.096774194 0.325581395 0.532258065 86 1 7 116 3R:8262232-8262292 6 119 2904 FBgn0010173 2297.653333 131.1433333 201.0833333 0.051791973 0.907404113 0.591794447 9 9 9 0.2 dme-miR-14-3p 6mer2-7 AGACTG 3R 8302765 8302770 - 3R_8302765_8302770_- 0.999676762 0.999779006 0.999727884 7.23E-05 nac FBtr0081863 8302684 8302798 3R - 8302745 8302788 3'utr nac FlyBase G48900.1 AAGCTGCCAAAGTAAAGTAGACTGTTTAGGACTCTAGGAGATGT 19 8302763 0.894385741 4 17 124 0.916666667 1.342422681 0.083333333 0.210526316 0.375 19 2 0 22 3R:8302745-8302788 6 nac FBtr0081863 8302684 8302798 AGACTG 6mer2-7 dme-miR-14-3p 3R - 8302741 8302788 3'utr nac FlyBase G36911.1 AAGCTGCCAAAGTAAAGTAGACTGTTTAGGACTCTAGGAGATGTAAGT 20 8302771 0.958973438 7 20 124 1 1.447158031 0.107142857 0.3 0.5 20 0 0 28 3R:8302741-8302788 6 19 2905 FBgn0265351 61.36333333 6.03 9.073333333 0.309631159 3.150912106 2.094048494 -7 1 -3 0.2 dme-miR-304-5p 7mer-A1 GAGATTA 3R 8304539 8304545 - 3R_8304539_8304545_- 0.823324342 0.820869962 0.822097152 0.001735452 Sgt1 FBtr0081862 8304188 8304585 3R - 8304514 8304582 3'utr Sgt1 FlyBase G48904.1 AAATGGCCATACTCCTTTATTTATAGAGTCAGCGAGAGAGATTAACAGAGAATAATTACTATAACGTGT 100 8304540 0.791933202 13 86 505 0.876106195 1.217483944 0.185840708 0.12 0.221238938 100 9 5 99 3R:8304514-8304582 7 Sgt1 FBtr0081862 8304188 8304585 GAGATTA 7mer-A1 dme-miR-304-5p 3R - 8304515 8304562 3'utr Sgt1 FlyBase G36912.1 TTATAGAGTCAGCGAGAGAGATTAACAGAGAATAATTACTATAACGTG 66 8304541 0.557150092 6 54 298 0.816326531 1.057991947 0.081632653 0.393939394 0.591836735 66 12 6 80 3R:8304515-8304562 7 79 2906 FBgn0265101 762 87.04666667 133.2433333 0.103674541 0.907559164 0.592900208 -5 -4 -4.5 0.2 dme-miR-2535b-3p 6mer3-8 CCGTGA 3R 8340466 8340471 - 3R_8340466_8340471_- 0.999974871 0.999934778 0.999954824 2.84E-05 CG9603 FBtr0081855|FBtr0305680 8339942|8339942 8340519|8340519 3R - 8340429 8340625 stop_codon CG9603 FlyBase G48919.1 CGTCGTGGACAACGTGCTCTACCGCGTCACCGTCGCTCTCGCCCTCGTCGGCATCGGTGGCATGGGCAAGCTTTTCTACGAGCTGAGTGTTCCCAAGAAGGAGTGAAGTCGCAGTACCGAACCCTAAGCTAAGCCATTAAACCCCGCGCAAGATCCGTGATTCAGCGTAGTCGCCTTATATTTCAATGTTTTGATTG 119 8340464 0.966881188 17 102 551 0.856115108 1.297395711 0.323741007 0.159663866 0.28057554 119 15 5 119 3R:8340429-8340625 6 CG9603 FBtr0081855|FBtr0305680 8339942|8339942 8340519|8340519 CCGTGA 6mer3-8 dme-miR-2535b-3p 3R - 8340442 8340487 5'utr CG9603 FlyBase G36925.1 AAACCCCGCGCAAGATCCGTGATTCAGCGTAGTCGCCTTATATTTC 64 8340464 0.949002874 6 58 285 0.921052632 1.419129308 0.570175439 0.53125 0.736842105 64 6 3 105 3R:8340442-8340487 6 83 2907 FBgn0040529 1087.99 255.58 391.3733333 0.076287466 0.324751546 0.212073723 -7 -7 -7 0.2 dme-miR-283-5p 8mer-A1 TGATATTA 3R 8352141 8352148 + 3R_8352141_8352148_+ 0.592121124 0.592172088 0.592146606 3.61E-05 Atg13 FBtr0081843 8351704 8352817 3R + 8352094 8352153 3'utr Atg13 FlyBase G41016.1 ATATTTATATATGCCATTGTGTTAAGTAGAGTTGATAGGCTGCTATTTGATATTACCCAC 176 8352129 0.675267041 16 167 1457 0.946341463 1.50965048 0.209756098 0.142045455 0.263414634 176 6 5 194 3R:8352094-8352153 8 Atg13 FBtr0081843 8351704 8352817 TGATATTA 8mer-A1 dme-miR-283-5p 3R + 8352085 8352158 3'utr Atg13 FlyBase G30956.1 CCCGCCCTCATATTTATATATGCCATTGTGTTAAGTAGAGTTGATAGGCTGCTATTTGATATTACCCACTATGT 115 8352137 0.888949192 14 110 954 0.956284153 2.243038049 0.224043716 0.382608696 0.612021858 115 8 0 175 3R:8352085-8352158 8 80.5 2908 FBgn0261108 690.5733333 27.67666667 42.22333333 0.116569807 2.908587258 1.906528776 12 4 8 0.2 dme-miR-184-3p 6mer3-8 TCCGTC 3R 8359853 8359858 + 3R_8359853_8359858_+ 0.99284164 0.978718931 0.985780286 0.009986257 stck FBtr0081846|FBtr0081845|FBtr0081844|FBtr0306260 8359725|8359725|8359725|8359725 8359960|8359964|8359964|8359964 3R + 8359804 8359886 3'utr stck FlyBase G41033.1 ATTTGAGAAACTAAAACCAAACAAACTAAAACCTCTTGTGCATGTCCTTTCCGTCTGTTGTAATCCGGTTGTGTGTAACTTAA 57 8359852 0.991784635 9 50 548 0.914634146 1.273001272 0.402439024 0.245614035 0.475609756 57 4 3 75 3R:8359804-8359886 6 stck FBtr0081846|FBtr0081845|FBtr0081844|FBtr0306260 8359725|8359725|8359725|8359725 8359960|8359964|8359964|8359964 TCCGTC 6mer3-8 dme-miR-184-3p 3R + 8359704 8359865 stop_codon stck FlyBase G30969.1 TGACAATGAAAAAGAACACCTAATGCCTTGGAGCGAGTCTCAGATCCACACCAAACAGTGCCTTTGTCGTTGTAGACCCGCTTTCACTACCATTTTTAACATTTGAGAAACTAAAACCAAACAAACTAAAACCTCTTGTGCATGTCCTTTCCGTCTGTTGTA 63 8359852 0.98422314 12 63 496 1 1.924279286 0.452380952 0.26984127 0.452380952 63 0 0 84 3R:8359704-8359865 6 43 2909 FBgn0020249 375.3333333 31.76 48.60666667 0.114564831 1.353904282 0.884652311 1 1 1 0.2 dme-miR-1003-3p 6mer3-8 ATGTGA 3R 8647820 8647825 - 3R_8647820_8647825_- 0.999987096 0.998047422 0.999017259 0.001371575 Mkk4 FBtr0334320|FBtr0081892|FBtr0300443 8646170|8647582|8647755 8648721|8648721|8648721 3R - 8647809 8647840 3'utr Mkk4 FlyBase G48953.1 ACAAAAACAAAAGTCATGTGAAAACTACAAAT 7 8647825 0.894502451 3 6 19 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3R:8647809-8647840 6 Mkk4 FBtr0334320|FBtr0081892|FBtr0300443 8646170|8647582|8647755 8648721|8648721|8648721 ATGTGA 6mer3-8 dme-miR-1003-3p 3R - 8647803 8647844 3'utr Mkk4 FlyBase G36950.1 AGCTACAAAAACAAAAGTCATGTGAAAACTACAAATAAAACA 7 8647815 0.928447892 4 7 23 1 1.041392685 0 0.571428571 0.727272727 7 0 0 11 3R:8647803-8647844 6 6.5 2910 FBgn0024326 1503.63 65.79666667 100.66 0.004322872 0.098789199 0.064573813 0 -10 -5 0.2 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 8655106 8655111 - 3R_8655106_8655111_- 0.966467486 0.999988674 0.98322808 0.023703068 bel FBtr0334319 8654973 8655784 3R - 8655098 8655138 3'utr bel FlyBase G48974.1 TGAAAGCGCAAATCCTTGAACTTCAATTGATGATTTTAAAC 10 8655111 0.961488311 4 10 84 1 1.113943352 0.076923077 0.3 0.461538462 10 0 0 13 3R:8655098-8655138 6 bel FBtr0334319 8654973 8655784 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R - 8655079 8655127 3'utr bel FlyBase G36964.1 ATCCTTGAACTTCAATTGATGATTTTAAACGAAGAAAACATAAAAATAG 6 8655112 0.983124136 5 6 47 1 0.954242509 0.111111111 0.333333333 0.555555556 6 0 0 9 3R:8655079-8655127 6 7 2911 FBgn0263231 3598.653333 111.0166667 171.27 0.001945172 0.063053596 0.040871139 0 1 0.5 0.2 dme-bantam-3p 7mer-m8 TGATCTC 3R 8714893 8714899 + 3R_8714893_8714899_+ 0.539514432 0.570203195 0.554858813 0.021700259 CG8112 FBtr0343149 8713899 8715263 3R + 8714864 8715219 stop_codon CG8112 FlyBase G41107.2 CAAGGTGGCCGCCTCGCTGGCAGTGTTCATGATCTCCGCTGTGGTCCATGAGCAGGTTCTCGGCTTTGCCCTGCAAATGTTCTTCCCAGTGATGTTCTTCTTCTTTGGGGTCGTGGGTGTTGCCTTGGTATTCCTAATGCGGAGTGCTCCAAAAGTGATGGGCAACATCTTTCTGTGGTTCTCTCTGATCCTGGGAAATGCCACGCTGATCTCACTATACGCCATGGAGCATTACGCCCTAAAGAACTGCAACCTAAGCAACGAGAGTTGGACGTATCGCCTGCTGCCGGCGGTATGGCGCTGCTACAATTAGTCAATTAGTTAAACACTACTTTTAAACTGTCTGTACACAGGGC 207 8714893 0.847350264 51 199 1465 0.966101695 1.880813592 0.25 0.120772947 0.228813559 207 6 2 228 3R:8714864-8715219 7 CG8112 FBtr0343149 8713899 8715263 TGATCTC 7mer-m8 dme-bantam-3p 3R + 8714833 8714984 3'utr CG8112 FlyBase G31014.1 AGGATATGTACACTCATGTGTTCCGAGGTTCCAAGGTGGCCGCCTCGCTGGCAGTGTTCATGATCTCCGCTGTGGTCCATGAGCAGGTTCTCGGCTTTGCCCTGCAAATGTTCTTCCCAGTGATGTTCTTCTTCTTTGGGGTCGTGGGTGTT 65 8714893 0.987779797 16 57 517 0.876404494 1.892094603 0.359550562 0.323076923 0.505617978 65 11 0 78 3R:8714833-8714984 7 64 2912 FBgn0037612 294.1433333 19.15333333 28.95666667 0.217580998 3.341454925 2.210199148 0 0 0 0.2 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 8715319 8715326 - 3R_8715319_8715326_- 0.624733245 0.625295847 0.625014546 0.000397818 Cks85A FBtr0081949|FBtr0305339|FBtr0337074 8715198|8715198|8712904 8715436|8715436|8715436 3R - 8715269 8715335 3'utr Cks85A FlyBase G49018.1 AAGAAACCATAGCTTTAGGGTTCAGCTGGGAAGTTCAAAGACACGAAACGAACTGAAGACATCGTTT 25 8715326 0.968230572 8 24 130 0.925925926 1.397940009 0.148148148 0.08 0.148148148 25 2 0 25 3R:8715269-8715335 8 Cks85A FBtr0305339|FBtr0337074|FBtr0081949 8715198|8712904|8715198 8715436|8715436|8715436 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R - 8715284 8715336 3'utr Cks85A FlyBase G36998.1 TAAGAAACCATAGCTTTAGGGTTCAGCTGGGAAGTTCAAAGACACGAAACGAA 15 8715326 0.961883877 4 14 71 0.925925926 1.397940009 0 0.466666667 0.703703704 15 2 0 25 3R:8715284-8715336 8 16.5 2913 FBgn0037613 139.0166667 24.61 37.97 0.118690804 0.670459163 0.434553595 0 0 0 0.2 dme-miR-33-5p 6mer3-8 CAATGC 3R 8715382 8715387 - 3R_8715382_8715387_- 0.835791608 0.572385868 0.704088738 0.186255957 Cks85A FBtr0081949|FBtr0305339|FBtr0337074 8715198|8715198|8712904 8715436|8715436|8715436 3R - 8715341 8715462 stop_codon Cks85A FlyBase G49019.1 AGGCCATCGCGAATCTCTGCGGTTAGGCGGAGGATGCCATGCCGCCGAGGAATGCTCTTCCAAGGACGCACTCGTCAATGCTCACGTAGTATTTCATAAGTTAGCATCAGGCAGCCTGATGT 26 8715384 0.965005246 14 24 127 0.942857143 1.217483944 0.285714286 0.230769231 0.428571429 26 1 1 33 3R:8715341-8715462 6 Cks85A FBtr0305339|FBtr0337074|FBtr0081949 8715198|8712904|8715198 8715436|8715436|8715436 CAATGC 6mer3-8 dme-miR-33-5p 3R - 8715341 8715428 3'utr Cks85A FlyBase G36999.1 TGCCATGCCGCCGAGGAATGCTCTTCCAAGGACGCACTCGTCAATGCTCACGTAGTATTTCATAAGTTAGCATCAGGCAGCCTGATGT 20 8715409 0.9735531 10 19 110 0.942857143 1.51851394 0.371428571 0.5 0.714285714 20 2 0 33 3R:8715341-8715428 6 10 2914 FBgn0037613 139.0166667 24.61 37.97 0.071933821 0.406338887 0.263365815 -3 22 9.5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 3R 8719929 8719935 + 3R_8719929_8719935_+ 0.774934861 0.682236675 0.728585768 0.065547526 CG8116 FBtr0300544|FBtr0081905|FBtr0300543 8718041|8718041|8718041 8720339|8720339|8721320 3R + 8719874 8719951 3'utr CG8116 FlyBase G41112.1 CCAGACCTACCGACTGCGCCTGGAGTACTGCCTGTGCACGCTGCAGATCGCCCTTTACCTGACCGAGGTGTGGTATGC 17 8719927 0.964984666 5 17 93 1 1.255272505 0.388888889 0.058823529 0.111111111 17 0 0 18 3R:8719874-8719951 7 CG8116 FBtr0081905|FBtr0300543|FBtr0300544 8718041|8718041|8718041 8720339|8721320|8720339 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R + 8719906 8719947 3'utr CG8116 FlyBase G31019.1 TGTGCACGCTGCAGATCGCCCTTTACCTGACCGAGGTGTGGT 24 8719927 0.747641304 2 23 142 0.973684211 1.568201724 0.631578947 0.375 0.605263158 24 1 0 37 3R:8719906-8719947 7 19.5 2915 FBgn0037614 544.57 26.27333333 40.6 0.035808069 0.742197412 0.480295567 2 2 2 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 8720123 8720129 + 3R_8720123_8720129_+ 0.657127752 0.65891894 0.658023346 0.001266499 CG8116 FBtr0300544|FBtr0081905|FBtr0300543 8718041|8718041|8718041 8720339|8720339|8721320 3R + 8720103 8720168 5'utr CG8116 FlyBase G41114.1 AATGAATTTGAAAAGCAGTAGGCAGCTGAATTGCTCATGGCCGTGGAGAAGAGAAACCAAACAGAA 30 8720140 0.945167452 5 29 122 0.972972973 1.556302501 0.324324324 0.166666667 0.324324324 30 1 0 36 3R:8720103-8720168 7 CG8116 FBtr0081905|FBtr0300543|FBtr0300544 8718041|8718041|8718041 8720339|8721320|8720339 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 8720073 8720162 5'utr CG8116 FlyBase G31020.1 AAAAGGATAATATGCGGTGTAAGGAAATTTAATGAATTTGAAAAGCAGTAGGCAGCTGAATTGCTCATGGCCGTGGAGAAGAGAAACCAA 26 8720121 0.947154766 6 26 111 1 1.62324929 0.19047619 0.5 0.69047619 26 0 0 42 3R:8720073-8720162 7 17.5 2916 FBgn0037614 544.57 26.27333333 40.6 0.032135446 0.6660746 0.431034483 -17 2 -7.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 8720513 8720520 + 3R_8720513_8720520_+ 0.630187103 0.631135131 0.630661117 0.000670337 CG8116 FBtr0300543 8718041 8721320 3R + 8720460 8720532 3'utr CG8116 FlyBase G41115.1 TAGCTCGAATCTTAAAAAGAATTGTAAAAAAATCAGTGGAATGTCTCACAAAATCTAGTCAGCATCAAAATCA 37 8720513 0.980800892 8 31 224 0.857142857 1.255272505 0 0.108108108 0.214285714 37 5 1 36 3R:8720460-8720532 8 CG8116 FBtr0300543 8718041 8721320 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 8720489 8720531 3'utr CG8116 FlyBase G31022.1 AAATCAGTGGAATGTCTCACAAAATCTAGTCAGCATCAAAATC 22 8720513 0.705455413 5 18 122 0.806451613 0.795880017 0 0.363636364 0.548387097 22 3 3 25 3R:8720489-8720531 8 27.5 2917 FBgn0037614 544.57 26.27333333 40.6 0.050498558 1.046688658 0.677339901 0 0 0 0.2 dme-miR-305-3p 6mer3-8 ATGTGC 3R 8735670 8735675 + 3R_8735670_8735675_+ 0.467901485 0.486795704 0.477348595 0.013360217 CG8202 FBtr0081914 8735615 8735837 3R + 8735628 8735687 3'utr CG8202 FlyBase G41138.1 GTAAATCCTATGGTTATTTATTTGCTGAGATTATATATTCTTATGTGCATGAATCTTTTA 24 8735664 0.991982066 6 23 274 0.965517241 1.447158031 0.275862069 0.166666667 0.310344828 24 1 0 28 3R:8735628-8735687 6 CG8202 FBtr0081914 8735615 8735837 ATGTGC 6mer3-8 dme-miR-305-3p 3R + 8735628 8735686 3'utr CG8202 FlyBase G31039.1 GTAAATCCTATGGTTATTTATTTGCTGAGATTATATATTCTTATGTGCATGAATCTTTT 31 8735663 0.993303019 7 30 361 0.98 1.389166084 0.32 0.387096774 0.62 31 0 1 49 3R:8735628-8735686 6 23.5 2918 FBgn0037622 349.97 13.58666667 20.66666667 0.067148613 1.729636899 1.137096774 6 7 6.5 0.2 dme-miR-932-5p 8mer-A1 GGAATTGA 3R 8774371 8774378 - 3R_8774371_8774378_- 0.631198889 0.607106017 0.619152453 0.017036253 Pif1B FBtr0332503|FBtr0091716|FBtr0091717|FBtr0332504 8774284|8774284|8774284|8774284 8774612|8774612|8774612|8774612 3R - 8774356 8774515 3'utr Pif1B FlyBase G49033.1 TATAGCGTATTGATATGTAGTGTTTGTTAAGAGTTCTTTATCTGGAGGATACCAATTGAAATCGTCTGTACGTAGTGCTTTGCATAGTGCCTTAAATCGTAATAGTATATCGTAAGCAAATATCAATGCATTGTAATGGAATTGAAAGCAGGTGGCTTCA 162 8774379 0.984877627 22 155 1255 0.943877551 2.267171728 0.076530612 0.179012346 0.321428571 162 11 0 185 3R:8774356-8774515 8 Pif1B FBtr0332504|FBtr0091717|FBtr0091716|FBtr0332503 8774284|8774284|8774284|8774284 8774612|8774612|8774612|8774612 GGAATTGA 8mer-A1 dme-miR-932-5p 3R - 8774356 8774418 3'utr Pif1B FlyBase G37011.1 CGTAATAGTATATCGTAAGCAAATATCAATGCATTGTAATGGAATTGAAAGCAGGTGGCTTCA 100 8774379 0.76898868 7 90 740 0.927631579 1.547159121 0.059210526 0.35 0.572368421 100 8 3 141 3R:8774356-8774418 8 68.5 2919 FBgn0046874 160.93 2.47 3.813333333 0.425650904 27.73279352 17.96328671 1 1 1 0.2 dme-miR-277-3p 7mer-m8 TGCATTT 3R 8806074 8806080 + 3R_8806074_8806080_+ 0.618356293 0.619162773 0.618759533 0.000570282 Tcp-1eta FBtr0081918 8806018 8806234 3R + 8806037 8806111 3'utr Tcp-1eta FlyBase G41163.1 TCCAGAGAACACTACACCCTAATCATCAAAACTCACTTGCATTTCTCTCCTAATTTAACACGTACACGTATTACT 65 8806073 0.945176488 10 59 501 0.952941176 1.908485019 0.035294118 0.261538462 0.435294118 65 4 0 81 3R:8806037-8806111 7 Tcp-1eta FBtr0081918 8806018 8806234 TGCATTT 7mer-m8 dme-miR-277-3p 3R + 8806039 8806143 3'utr Tcp-1eta FlyBase G31058.1 CAGAGAACACTACACCCTAATCATCAAAACTCACTTGCATTTCTCTCCTAATTTAACACGTACACGTATTACTCGGTCATACCTTCGCATTTCGCACGCTTCGAA 34 8806073 0.986595955 13 32 271 0.954545455 1.62324929 0.068181818 0.235294118 0.409090909 34 2 0 42 3R:8806039-8806143 7 36 2920 FBgn0037632 3686.506667 229.3533333 352.0766667 0.009765342 0.156963056 0.102250457 1 1 1 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 8807216 8807223 + 3R_8807216_8807223_+ 0.594224867 0.551243447 0.572734157 0.03039251 hng2 FBtr0081919 8807182 8807581 3R + 8807187 8807258 3'utr hng2 FlyBase G41170.1 TTCACTACAGAAGTCAAATCATTTACAAATGCATTTACAAGAAGGGCAAAATTCGTTTAACAGCAAGTTAAC 16 8807216 0.96443678 5 15 79 1 1.278753601 0.315789474 0.1875 0.315789474 16 0 0 19 3R:8807187-8807258 8 hng2 FBtr0081919 8807182 8807581 TGCATTTA 8mer-A1 dme-miR-277-3p 3R + 8807195 8807249 3'utr hng2 FlyBase G31063.1 AGAAGTCAAATCATTTACAAATGCATTTACAAGAAGGGCAAAATTCGTTTAACAG 12 8807220 0.952218411 6 11 53 0.866666667 1.113943352 0.466666667 0.25 0.4 12 2 0 13 3R:8807195-8807249 8 8.5 2921 FBgn0037634 138.6666667 14.15666667 21.7 0.061298077 0.600423829 0.391705069 0 -4 -2 0.2 dme-miR-276a-3p 7mer-A1 GTTCCTA 3R 8814045 8814051 - 3R_8814045_8814051_- 0.679437283 0.794056367 0.736746825 0.081047943 CG9821 FBtr0334659 8813488 8817862 3R - 8814032 8814095 3'utr CG9821 FlyBase G49074.1 GAACCATTTCCAACTCCGTTTCGATGTGAAAAACTATCCTGATTGTTCCTATGTTAGTTCTGAG 9 8814053 0.992959407 3 7 89 0.916666667 1.041392685 0.416666667 0.333333333 0.5 9 1 0 11 3R:8814032-8814095 7 CG9821 FBtr0334659 8813488 8817862 GTTCCTA 7mer-A1 dme-miR-276a-3p 3R - 8813991 8814068 3'utr CG9821 FlyBase G37039.1 GAAAAACTATCCTGATTGTTCCTATGTTAGTTCTGAGTAGATGCAACCGCAATCGGATCGGCGAATCCATTAACAACT 10 8814053 0.993970706 4 8 95 0.785714286 1.041392685 0.214285714 0.4 0.571428571 10 3 0 11 3R:8813991-8814068 7 7.5 2922 FBgn0037636 4388.82 121.91 186.95 0.001708888 0.061520794 0.040117679 2 2 2 0.2 dme-miR-33-5p 6mer2-7 AATGCA 3R 8814154 8814159 - 3R_8814154_8814159_- 0.978012779 0.991398091 0.984705435 0.009464836 CG9821 FBtr0334659 8813488 8817862 3R - 8814107 8814176 3'utr CG9821 FlyBase G49075.1 CCAGATATTGCGACATAAATGCATGCAAAGTAAAATAAAACGATAAGCAACTTTACAGAGCCGAAGGGCA 25 8814156 0.962702372 8 25 125 1 1.462397998 0 0.16 0.275862069 25 0 0 29 3R:8814107-8814176 6 CG9821 FBtr0334659 8813488 8817862 AATGCA 6mer2-7 dme-miR-33-5p 3R - 8814145 8814182 3'utr CG9821 FlyBase G37040.1 AAACACCCAGATATTGCGACATAAATGCATGCAAAGTA 14 8814156 0.850563049 5 11 72 0.84 1.322219295 0.08 0.5 0.72 14 4 0 21 3R:8814145-8814182 6 18.5 2923 FBgn0037636 4388.82 121.91 186.95 0.004215256 0.151751292 0.09895694 -3 -3 -3 0.2 dme-miR-277-3p 7mer-m8 TGCATTT 3R 8815492 8815498 - 3R_8815492_8815498_- 0.619584523 0.619488923 0.619536723 6.76E-05 CG9821 FBtr0081931|FBtr0334660|FBtr0334659 8814683|8814683|8813488 8817862|8817862|8817862 3R - 8815244 8815536 3'utr CG9821 FlyBase G49081.1 ACCCCACAGAAAGACCCAAAACTTGTCGCGCAGAATTTTGCATTTTTTTTAAGTGTAAGCAAAACGTTTGTTACTTACTGGACGTCAGTTTAAGCGGAGAACAGCTTAGATTTCATTGAAGCAGGATAGAGATACAGATGCAAAACCTATTTGTAAAATTCAAAAGAAGAGAAAACCACTTTACTTAAAACAGACCAAAACAGCCCAGATTCGCCCGCTCTGCCTTGGACTGTGGGCACAAACGTTCCGGCCCGCTGACTTTTTCAACACCAATCAGTACAAAATAATTTCCA 284 8815499 0.984709519 42 268 2152 0.93982808 1.913813852 0.283667622 0.169014085 0.323782235 284 18 3 328 3R:8815244-8815536 7 CG9821 FBtr0334659|FBtr0081931|FBtr0334660 8813488|8814683|8814683 8817862|8817862|8817862 TGCATTT 7mer-m8 dme-miR-277-3p 3R - 8815375 8815525 3'utr CG9821 FlyBase G37046.1 AGACCCAAAACTTGTCGCGCAGAATTTTGCATTTTTTTTAAGTGTAAGCAAAACGTTTGTTACTTACTGGACGTCAGTTTAAGCGGAGAACAGCTTAGATTTCATTGAAGCAGGATAGAGATACAGATGCAAAACCTATTTGTAAAATTCA 115 8815499 0.983829572 26 107 1106 0.915662651 2.181843588 0.391566265 0.339130435 0.542168675 115 14 0 152 3R:8815375-8815525 7 98.5 2924 FBgn0037636 4388.82 121.91 186.95 0.02244339 0.807973095 0.526878845 1 1 1 0.2 dme-miR-12-5p 6mer3-8 AATACT 3R 8816157 8816162 - 3R_8816157_8816162_- 0.819890364 0.830980603 0.825435483 0.007841956 CG9821 FBtr0081931|FBtr0334660|FBtr0334659 8814683|8814683|8813488 8817862|8817862|8817862 3R - 8816098 8816326 3'utr CG9821 FlyBase G49083.1 TATGTTTGATCTTGCGCCGAGCGGAAACAACAATTGTGAAAACAACTAAAAACTATATAAGTTGCAATCCCCAAAGCGAAGGCTTTACGAGAGAGGAAAAGATATAGTAATCGCGAGATGAGAATGAAATGAAACTACTTTATGTAAACTATTCGTTGATGCTCAATACTGAAACACTTGAACCCAGTACCTTATTTTCATTATTAGCATTACTTATTAATTGTTAATA 970 8816170 0.933809347 49 921 6839 0.948497854 2.140272291 0.098712446 0.16185567 0.302145923 970 53 7 1105 3R:8816098-8816326 6 CG9821 FBtr0334659|FBtr0081931|FBtr0334660 8813488|8814683|8814683 8817862|8817862|8817862 AATACT 6mer3-8 dme-miR-12-5p 3R - 8815675 8816324 3'utr CG9821 FlyBase G37047.2 TGTTTGATCTTGCGCCGAGCGGAAACAACAATTGTGAAAACAACTAAAAACTATATAAGTTGCAATCCCCAAAGCGAAGGCTTTACGAGAGAGGAAAAGATATAGTAATCGCGAGATGAGAATGAAATGAAACTACTTTATGTAAACTATTCGTTGATGCTCAATACTGAAACACTTGAACCCAGTACCTTATTTTCATTATTAGCATTACTTATTAATTGTTAATATTAATATGTATGTAAATTATTTAAGCCATCCCAAGCCTCCCACACTTCCAGATATCCTCAGCCAATCCAAAGTTATTTGTATTTTGCGTAGAAAGAGGCAGCGTGAGTTTTGTTATGTGTTTTTGCCAAGTGAATTGGCACCGAAGTGATAAGCCAAAAACAAAAGGAACCCCAAAATGTAAATGATAGTGGAAAATCCCAGAAATAAGATCGCACTTGAGTTTTGTTTACGCATATTGTTTAACTTCCCGAACCATCTAAATTATGAAACACGAGAATGAGAGATGAAAAGATATGAAACTATAACAAAACACTCGATGATAGTTTTAAAAATGTTGAAAAGCCAAAAAAGTCAAGTACTGTTTAGGTTTACTGAGCAAGTTGTCATATATTGGTAGCTTTAAAGCTTGTATCTTCAAGTTA 1043 8816170 0.932668009 110 962 7064 0.926234766 1.904294688 0.12508018 0.37008629 0.57857601 1043 98 17 1444 3R:8815675-8816324 6 512 2925 FBgn0037636 4388.82 121.91 186.95 0.116660059 4.199819539 2.738700187 8 8 8 0.2 dme-bantam-3p 8mer-A1 TGATCTCA 3R 8817547 8817554 - 3R_8817547_8817554_- 0.627409938 0.627246459 0.627328199 0.000115541 CG9821 FBtr0081931|FBtr0334660|FBtr0334659 8814683|8814683|8813488 8817862|8817862|8817862 3R - 8817404 8817579 3'utr CG9821 FlyBase G49088.1 AAAAAAAAAACAAGAGTAATGTTTGTGATCTCAAGTGTGTATCATAAAACAATTAAACCAATTTGAGAAGCTATTAGGTGAGAAGAGAAAAACTGTTTCAAGAAAAGAAAACTGAAAGCAAACAAAATACAAGTAAAAAACACACAAACTACTGTCCTCACACAACCGACCGACAA 1553 8817555 0.986457162 31 1472 12650 0.950578339 2.143255074 0.087276551 0.186735351 0.335962145 1553 82 12 1808 3R:8817404-8817579 8 CG9821 FBtr0334659|FBtr0081931|FBtr0334660 8813488|8814683|8814683 8817862|8817862|8817862 TGATCTCA 8mer-A1 dme-bantam-3p 3R - 8817411 8817633 3'utr CG9821 FlyBase G37051.1 AAAAAAAGCGAAAACATTTCAACTGGAAATTTGAACTTTTTTAAACAAAAACAAAAAAAAAAAACAAGAGTAATGTTTGTGATCTCAAGTGTGTATCATAAAACAATTAAACCAATTTGAGAAGCTATTAGGTGAGAAGAGAAAAACTGTTTCAAGAAAAGAAAACTGAAAGCAAACAAAATACAAGTAAAAAACACACAAACTACTGTCCTCACACAACCGA 1326 8817555 0.977850059 33 1250 10639 0.949243533 1.92719177 0.105417277 0.386877828 0.603221083 1326 82 22 1945 3R:8817411-8817633 8 1295 2926 FBgn0037636 4388.82 121.91 186.95 0.295067923 10.62259044 6.926985825 1 1 1 0.2 dme-bantam-3p 6mer3-8 TGATCT 3R 8822988 8822993 - 3R_8822988_8822993_- 0.987256038 0.999277769 0.993266903 0.008500696 CG9836 FBtr0081930 8822847 8823423 3R - 8822950 8823063 3'utr CG9836 FlyBase G49097.1 CGCGTGACTGCTGATAAGTGCATAGAAGTTTAGGAATCGTCTGTCATTGATACTAAAGGATAGCTGGAACTGATCTTGTATGAATGCATATGCACGTGTGTGTTTTGTAGGGGA 62 8822991 0.979749146 16 58 406 0.930555556 1.826074803 0.097222222 0.129032258 0.25 62 5 0 67 3R:8822950-8823063 6 CG9836 FBtr0081930 8822847 8823423 TGATCT 6mer3-8 dme-bantam-3p 3R - 8822968 8823048 3'utr CG9836 FlyBase G37067.1 AAGTGCATAGAAGTTTAGGAATCGTCTGTCATTGATACTAAAGGATAGCTGGAACTGATCTTGTATGAATGCATATGCACG 46 8822992 0.97224604 14 45 277 0.985915493 1.84509804 0.126760563 0.391304348 0.605633803 46 1 0 70 3R:8822968-8823048 6 38.5 2927 FBgn0037637 411.3666667 53.83333333 81.98666667 0.093590471 0.715170279 0.469588551 -2 -1 -1.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 8823403 8823408 - 3R_8823403_8823408_- 0.999936251 0.999984436 0.999960343 3.40E-05 CG9836 FBtr0081930|FBtr0081930|FBtr0081930 8822847|8822847|8822847 8823423|8823423|8823423 3R - 8823365 8823437 stop_codon CG9836 FlyBase G49099.1 AGGTGGCCAACTGAGAGGCGGAACGGAATCTGTGAATGTAGTGGAGCGTTTCTCTGAACAACTACTAAAAAAA 315 8823409 0.955159775 9 307 1417 0.978378378 2.257678575 0.467567568 0.142857143 0.27027027 315 7 1 362 3R:8823365-8823437 6 CG9836 FBtr0081930|FBtr0081930|FBtr0081930 8822847|8822847|8822847 8823423|8823423|8823423 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 8823372 8823446 stop_codon CG9836 FlyBase G37069.1 AGCAGAAGAAGGTGGCCAACTGAGAGGCGGAACGGAATCTGTGAATGTAGTGGAGCGTTTCTCTGAACAACTACT 212 8823409 0.902667077 8 208 953 0.987878788 2.5132176 0.442424242 0.391509434 0.609090909 212 4 0 326 3R:8823372-8823446 6 253.5 2928 FBgn0037637 411.3666667 53.83333333 81.98666667 0.616238554 4.708978328 3.091966173 1 1 1 0.2 dme-miR-33-5p 7mer-A1 AATGCAA 3R 8827831 8827837 - 3R_8827831_8827837_- 0.778455835 0.778971694 0.778713764 0.000364796 pyd FBtr0305301|FBtr0310205|FBtr0305297|FBtr0305304|FBtr0305298|FBtr0305299|FBtr0305296|FBtr0305295 8827496|8827066|8827496|8827496|8827496|8827496|8827496|8827066 8828314|8828094|8828094|8828314|8828314|8828314|8828314|8828314 3R - 8827783 8827858 3'utr pyd FlyBase G49103.1 GAGCTAGAAATTAATCAATCGAATGCAATGGATACTTGTATAAAGCGACTAGAATTTAATTTCATACACAAATTAT 26 8827835 0.973883204 7 26 163 1 1.531478917 0.117647059 0.230769231 0.411764706 26 0 0 34 3R:8827783-8827858 7 pyd FBtr0305296|FBtr0305295|FBtr0305298|FBtr0305299|FBtr0305297|FBtr0305304|FBtr0305301|FBtr0310205 8827496|8827066|8827496|8827496|8827496|8827496|8827496|8827066 8828314|8828314|8828314|8828314|8828094|8828314|8828314|8828094 AATGCAA 7mer-A1 dme-miR-33-5p 3R - 8827788 8827925 3'utr pyd FlyBase G37074.1 AATTCGATATTGTCTGTTAATTGTGCCTTTAAGTGATCGTTTGGCTCTGCCTCTGAACTATTATATCGAGCTAGAAATTAATCAATCGAATGCAATGGATACTTGTATAAAGCGACTAGAATTTAATTTCATACACAA 48 8827835 0.982303009 23 45 371 0.961038961 1.392110465 0.12987013 0.375 0.61038961 48 1 2 74 3R:8827788-8827925 7 22.5 2929 FBgn0262614 694.76 11.98333333 18.49333333 0.032385284 1.877607789 1.21665465 -2 -2 -2 0.2 dme-miR-1007-3p 6mer3-8 TGAGCT 3R 8827972 8827977 - 3R_8827972_8827977_- 0.588698448 0.693367911 0.641033179 0.074012513 pyd FBtr0305301|FBtr0310205|FBtr0305297|FBtr0305304|FBtr0305298|FBtr0305299|FBtr0305296|FBtr0305295 8827496|8827066|8827496|8827496|8827496|8827496|8827496|8827066 8828314|8828094|8828094|8828314|8828314|8828314|8828314|8828314 3R - 8827904 8828033 3'utr pyd FlyBase G49104.2 TAGATCCGTAGTATCATATGTGTAGTCTTAGGGCCGCAATTCCAGGGCAGACGAAATGAGCTGAGCAAAGAGGTAGTATAGGCATTGCTTATATAATATAATAAATTTAATTCGATATTGTCTGTTAATT 55 8827977 0.987064342 13 51 311 0.984848485 1.812913357 0.136363636 0.127272727 0.272727273 55 1 0 65 3R:8827904-8828033 6 pyd FBtr0305296|FBtr0305295|FBtr0305298|FBtr0305299|FBtr0305297|FBtr0305304|FBtr0305301|FBtr0310205 8827496|8827066|8827496|8827496|8827496|8827496|8827496|8827066 8828314|8828314|8828314|8828314|8828094|8828314|8828314|8828094 TGAGCT 6mer3-8 dme-miR-1007-3p 3R - 8827942 8828182 stop_codon pyd FlyBase G37075.1 GAAGAATCTGCACACCGAGTGGGACAACATCGACCTGCCCAGCAATGCCGCCGCTCACACGGTCTCCGTCAAGGTGGATCACTTCTAATCATTAAGATTCATAGCACTACCATTCACCAGCCAACTTGAACGATATACGAAATTGTAAATAGATCCGTAGTATCATATGTGTAGTCTTAGGGCCGCAATTCCAGGGCAGACGAAATGAGCTGAGCAAAGAGGTAGTATAGGCATTGCTTAT 44 8827977 0.963941579 22 40 204 0.917808219 1.525044807 0.164383562 0.386363636 0.630136986 44 5 1 67 3R:8827942-8828182 6 11 2930 FBgn0262614 694.76 11.98333333 18.49333333 0.015832806 0.917941586 0.59480894 0 0 0 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3R 8942452 8942458 + 3R_8942452_8942458_+ 0.496441535 0.521039475 0.508740505 0.017393413 skap FBtr0334328|FBtr0334327 8942073|8942073 8942557|8942557 3R + 8942412 8942471 3'utr skap FlyBase G41209.1 ACGTGAATAATAGAAAATGGAAATGAAAATACGTTTTAATTGTGATTTTTGCAAAAGTTC 29 8942458 0.991705167 6 27 299 0.948717949 1.267171728 0.358974359 0.206896552 0.41025641 29 1 1 37 3R:8942412-8942471 7 skap FBtr0334328|FBtr0334327 8942073|8942073 8942557|8942557 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 8942403 8942539 3'utr skap FlyBase G31087.1 ATTAATTGCACGTGAATAATAGAAAATGGAAATGAAAATACGTTTTAATTGTGATTTTTGCAAAAGTTCATTTAAATTTTATTTATTGAAATGTGACCCTGCTTTTAAAGCAGATCCATCATCTTGTGTATTATCCT 41 8942451 0.991400554 16 39 410 0.943396226 1.698970004 0.264150943 0.219512195 0.396226415 41 3 0 50 3R:8942403-8942539 7 26.5 2931 FBgn0037643 1428.996667 91.75333333 140.5033333 0.01854448 0.288817845 0.188607625 -6 1 -2.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 8982673 8982680 + 3R_8982673_8982680_+ 0.6369023 0.630233021 0.63356766 0.004715907 CAHbeta FBtr0340014|FBtr0340014|FBtr0340014 8981922|8981922|8981922 8982793|8982793|8982793 3R + 8982587 8982709 3'utr CAHbeta FlyBase G41212.1 GATGAAGACACCGTGGATCGATTGTCCGAGGAGGTCAGAAGATTCTATTCGTAGGCGAAACATGCCAAGAGGACCAAATGGATTATCTGTGATATGTGGGCCTTATACCGCGATCGGCATTTA 144 8982672 0.964113334 14 134 1299 0.93452381 1.894869657 0.107142857 0.118055556 0.244047619 144 10 1 157 3R:8982587-8982709 8 CAHbeta FBtr0340014|FBtr0340014|FBtr0340014 8981922|8981922|8981922 8982793|8982793|8982793 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 8982639 8982699 3'utr CAHbeta FlyBase G31089.1 AGGCGAAACATGCCAAGAGGACCAAATGGATTATCTGTGATATGTGGGCCTTATACCGCGA 97 8982672 0.869174298 11 92 907 0.955128205 1.571126277 0.102564103 0.381443299 0.615384615 97 4 3 149 3R:8982639-8982699 8 113 2932 FBgn0037646 43.33333333 4.79 7.23 2.607692308 23.5908142 15.62932227 1 1 1 0.2 dme-miR-283-5p 7mer-m8 TGATATT 3R 9007898 9007904 + 3R_9007898_9007904_+ 0.45546883 0.453461563 0.454465197 0.001419305 CG11982 FBtr0081965 9007855 9008030 3R + 9007874 9007933 3'utr CG11982 FlyBase G41249.1 AATCGAAGTGGAGCGATGATCGATTGATATTCAAAATTAAGCCAAATATTGGCCGCATAT 24 9007897 0.981757562 5 23 166 0.965517241 1.447158031 0.034482759 0.166666667 0.310344828 24 1 0 28 3R:9007874-9007933 7 CG11982 FBtr0081965 9007855 9008030 TGATATT 7mer-m8 dme-miR-283-5p 3R + 9007872 9007912 3'utr CG11982 FlyBase G31115.1 TAAATCGAAGTGGAGCGATGATCGATTGATATTCAAAATTA 13 9007897 0.776921424 3 13 102 1 1.361727836 0 0.461538462 0.695652174 13 0 0 23 3R:9007872-9007912 7 16.5 2933 FBgn0037653 203.22 15.85333333 24.31666667 0.081192796 1.04079058 0.67854695 1 1 1 0.2 dme-miR-965-3p 6mer2-7 ACGCTT 3R 9017195 9017200 - 3R_9017195_9017200_- 0.557944208 0.847036054 0.702490131 0.204418843 tgo FBtr0082005 9016771 9017753 3R - 9017184 9017226 3'utr tgo FlyBase G49212.1 AGCAACTCAGCAAGTGTACCACTTCCACGCTTTTCCCGCGAAC 10 9017194 0.707454545 2 10 59 1 1.079181246 0 0.2 0.333333333 10 0 0 12 3R:9017184-9017226 6 tgo FBtr0082005 9016771 9017753 ACGCTT 6mer2-7 dme-miR-965-3p 3R - 9017186 9017239 3'utr tgo FlyBase G37153.1 ATTGATAGTTGTAAGCAACTCAGCAAGTGTACCACTTCCACGCTTTTCCCGCGA 5 9017220 0.948781538 4 5 26 1 1 0.3 0.6 0.8 5 0 0 10 3R:9017186-9017239 6 6 2934 FBgn0264075 208 8.796666667 13.4 0.028846154 0.682076544 0.447761194 -6 20 7 0.2 dme-miR-7-5p 6mer2-7 TCTTCC 3R 9017720 9017725 - 3R_9017720_9017725_- 0.757082234 0.906549751 0.831815992 0.105689554 tgo FBtr0082005|FBtr0336755 9016771|9017245 9017753|9017753 3R - 9017665 9017743 3'utr tgo FlyBase G49217.1 ATTTCTTTCGATTCCCACTCTTCCCCCGTCCCGCAACTTAATCTGTGTCTCTCTTAACCACTTCTCAAGTGCAATCCAT 12 9017723 0.981112032 7 12 89 1 1.146128036 0.142857143 0.166666667 0.285714286 12 0 0 14 3R:9017665-9017743 6 tgo FBtr0082005|FBtr0336755 9016771|9017245 9017753|9017753 TCTTCC 6mer2-7 dme-miR-7-5p 3R - 9017688 9017741 3'utr tgo FlyBase G37157.1 TTCTTTCGATTCCCACTCTTCCCCCGTCCCGCAACTTAATCTGTGTCTCTCTTA 8 9017732 0.983815836 4 7 64 0.9 0.954242509 0.2 0.25 0.4 8 1 0 9 3R:9017688-9017741 6 7.5 2935 FBgn0264075 208 8.796666667 13.4 0.036057692 0.85259568 0.559701493 -2 7 2.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 9020972 9020979 - 3R_9020972_9020979_- 0.630423461 0.63040831 0.630415885 1.07E-05 neur FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002|FBtr0300414 9020346|9020346|9020346|9020346|9020721 9021792|9021792|9021792|9021792|9021792 3R - 9020954 9021023 3'utr neur FlyBase G49227.1 GTTTAAAGTTAATATTAGTCTAGCCCTAAGTACTTAAGTTAATTTCTAGTCAACGAATTATGCTGAAGTT 100 9020980 0.98176363 8 93 688 0.936507937 1.594760753 0.03968254 0.18 0.349206349 100 6 2 118 3R:9020954-9021023 8 neur FBtr0300414|FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002 9020721|9020346|9020346|9020346|9020346 9021792|9021792|9021792|9021792|9021792 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R - 9020953 9020989 3'utr neur FlyBase G37163.1 TAAGTTAATTTCTAGTCAACGAATTATGCTGAAGTTA 95 9020980 0.80044952 4 93 619 0.973509934 2.167317335 0.039735099 0.410526316 0.629139073 95 4 0 147 3R:9020953-9020989 8 95.5 2936 FBgn0002932 466.07 14.63 22.51666667 0.204904843 6.527682843 4.241302739 1 1 1 0.2 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 3R 9021265 9021272 - 3R_9021265_9021272_- 0.625194139 0.625146317 0.625170228 3.38E-05 neur FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002|FBtr0300414 9020346|9020346|9020346|9020346|9020721 9021792|9021792|9021792|9021792|9021792 3R - 9021251 9021291 3'utr neur FlyBase G49229.1 ATTTGGCGATTAATCATTTTGGTGCTAAATGTTTTGAAAGG 37 9021273 0.723439899 5 37 361 1 1.681241237 0.270833333 0.243243243 0.416666667 37 0 0 48 3R:9021251-9021291 8 neur FBtr0300414|FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002 9020721|9020346|9020346|9020346|9020346 9021792|9021792|9021792|9021792|9021792 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 3R - 9021250 9021290 3'utr neur FlyBase G37164.1 TTTGGCGATTAATCATTTTGGTGCTAAATGTTTTGAAAGGC 31 9021273 0.725945473 2 31 290 1 1.662757832 0.347826087 0.322580645 0.543478261 31 0 0 46 3R:9021250-9021290 8 34 2937 FBgn0002932 466.07 14.63 22.51666667 0.072950415 2.323991798 1.509992598 1 1 1 0.2 dme-miR-11-3p 7mer-m1 TGTGATG 3R 9021555 9021561 - 3R_9021555_9021561_- 0.611811496 0.612003325 0.611907411 0.000135623 neur FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002|FBtr0300414 9020346|9020346|9020346|9020346|9020721 9021792|9021792|9021792|9021792|9021792 3R - 9021504 9021579 3'utr neur FlyBase G49230.1 ACGTATGTTTAATTTTTTTGTGATGTTATAAGTAAGTGCGCCCCAGAGCCAAAACTATGTATTGTTCAATCCAACA 26 9021562 0.804586544 7 22 304 0.866666667 1.113943352 0.233333333 0.115384615 0.233333333 26 3 1 26 3R:9021504-9021579 7 neur FBtr0300414|FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002 9020721|9020346|9020346|9020346|9020346 9021792|9021792|9021792|9021792|9021792 TGTGATG 7mer-m1 dme-miR-11-3p 3R - 9021503 9021611 3'utr neur FlyBase G37165.1 TTAGTGTATGAAACTATCAACTAATTTATCACACGTATGTTTAATTTTTTTGTGATGTTATAAGTAAGTGCGCCCCAGAGCCAAAACTATGTATTGTTCAATCCAACAA 24 9021563 0.993717466 12 22 268 0.925 1.267171728 0.2 0.5 0.7 24 2 1 37 3R:9021503-9021611 7 20 2938 FBgn0002932 466.07 14.63 22.51666667 0.042912009 1.367053999 0.88823094 1 2 1.5 0.2 dme-miR-317-5p 6mer3-8 GTATCC 3R 9042309 9042314 + 3R_9042309_9042314_+ 0.516215023 0.996709688 0.756462356 0.339761061 hyx FBtr0300415|FBtr0081968 9041940|9041940 9042349|9042349 3R + 9042287 9042344 3'utr hyx FlyBase G41258.2 AAACACAAACATCTGAGAGCAAGTATCCTTTGTATTTTTAGTGATAATAAACAGTTAA 16 9042318 0.859263488 8 15 134 0.952380952 1 0.095238095 0.1875 0.380952381 16 0 1 20 3R:9042287-9042344 6 hyx FBtr0300415|FBtr0081968 9041940|9041940 9042349|9042349 GTATCC 6mer3-8 dme-miR-317-5p 3R + 9042291 9042330 3'utr hyx FlyBase G31123.1 ACAAACATCTGAGAGCAAGTATCCTTTGTATTTTTAGTGA 9 9042316 0.70232995 4 9 74 1 1.230448921 0 0.555555556 0.764705882 9 0 0 17 3R:9042291-9042330 6 9.5 2939 FBgn0037657 511.6666667 27.83666667 42.89666667 0.018566775 0.341276494 0.221462429 -9 -7 -8 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 9062211 9062217 + 3R_9062211_9062217_+ 0.439153086 0.566153966 0.502653526 0.089803198 Kdm2 FBtr0300691|FBtr0336760|FBtr0336759|FBtr0336758 9062203|9062203|9062203|9062203 9063245|9063245|9063245|9063245 3R + 9062184 9062232 stop_codon Kdm2 FlyBase G41288.1 CGAAGCTGGCACCACGACTGAGCCACTGGCAGCTGGAGGAGGGCCAATA 43 9062210 0.94716337 3 42 82 0.98 1.389166084 0.32 0.162790698 0.28 43 0 1 49 3R:9062184-9062232 7 Kdm2 FBtr0300691|FBtr0336760|FBtr0336759|FBtr0336758 9062203|9062203|9062203|9062203 9063245|9063245|9063245|9063245 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 9062186 9062244 stop_codon Kdm2 FlyBase G31153.1 AAGCTGGCACCACGACTGAGCCACTGGCAGCTGGAGGAGGGCCAATACATCTTAATCAT 20 9062210 0.836495522 5 19 46 0.964285714 1.431363764 0.178571429 0.3 0.5 20 1 0 27 3R:9062186-9062244 7 27.5 2940 FBgn0037659 729.05 16.58333333 25.47333333 0.037720321 1.658291457 1.079560325 1 1 1 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3R 9062375 9062381 + 3R_9062375_9062381_+ 0.705366024 0.796430172 0.750898098 0.064392113 Kdm2 FBtr0300691|FBtr0336760|FBtr0336759|FBtr0336758 9062203|9062203|9062203|9062203 9063245|9063245|9063245|9063245 3R + 9062235 9062392 3'utr Kdm2 FlyBase G41289.1 TCTTAATCATATGCATTAAGACACCAAACTTTCTAAGCCCCAATCCAGTACCATGTACTCCGAATCCCTCGCCGGAATGCAAGCCAAAGAGTGTCGTCGGGCCCTTTGCATTGCGTGTGGTTATATTCTTAAATGCTAAGCTAGTCAGGATAGGGCTC 34 9062371 0.975682334 12 31 197 0.918918919 1.531478917 0.135135135 0.088235294 0.162162162 34 3 0 34 3R:9062235-9062392 7 Kdm2 FBtr0300691|FBtr0336760|FBtr0336759|FBtr0336758 9062203|9062203|9062203|9062203 9063245|9063245|9063245|9063245 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 9062287 9062445 3'utr Kdm2 FlyBase G31154.1 ATGTACTCCGAATCCCTCGCCGGAATGCAAGCCAAAGAGTGTCGTCGGGCCCTTTGCATTGCGTGTGGTTATATTCTTAAATGCTAAGCTAGTCAGGATAGGGCTCAGGTCATATTCAGGTTCAGGTCTGTTTTTCCGATACCTTTTGAGAATCTCAAA 27 9062371 0.88351406 14 23 190 0.860465116 1.568201724 0.069767442 0.333333333 0.581395349 27 6 0 37 3R:9062287-9062445 7 11.5 2941 FBgn0037659 729.05 16.58333333 25.47333333 0.015773952 0.693467337 0.451452499 4 4 4 0.2 dme-miR-33-5p 8mer-m1 CAATGCAC 3R 9068884 9068891 - 3R_9068884_9068891_- 0.589859427 0.50935018 0.549604803 0.056928601 pum FBtr0081993|FBtr0333668|FBtr0333667 9067576|9066341|9066341 9070944|9070944|9070944 3R - 9068869 9068943 3'utr pum FlyBase G49275.2 ATTTGTTTGGTACTTTTAGTTATTAACTTGTCAACTGCCTGTCTCTAGAGCGCAATGCACTGATAATTTTAATTT 46 9068904 0.759314812 11 39 380 0.86 1.33243846 0.14 0.086956522 0.16 46 6 1 43 3R:9068869-9068943 8 pum FBtr0333667|FBtr0333668|FBtr0081993 9066341|9066341|9067576 9070944|9070944|9070944 CAATGCAC 8mer-m1 dme-miR-33-5p 3R - 9068868 9068935 3'utr pum FlyBase G37214.1 GGTACTTTTAGTTATTAACTTGTCAACTGCCTGTCTCTAGAGCGCAATGCACTGATAATTTTAATTTA 28 9068888 0.837034004 12 27 234 0.977777778 1.643452676 0.311111111 0.357142857 0.6 28 1 0 44 3R:9068868-9068935 8 21.5 2942 FBgn0003165 2989.103333 65.03333333 99.94333333 0.007192792 0.330599692 0.215121902 13 -3 5 0.2 dme-miR-1006-3p 8mer-A1 CGAATTTA 3R 9069318 9069325 - 3R_9069318_9069325_- 0.661703686 0.671696332 0.666700009 0.007065835 pum FBtr0081993|FBtr0333668|FBtr0333667 9067576|9066341|9066341 9070944|9070944|9070944 3R - 9069292 9069416 3'utr pum FlyBase G49277.1 CATTTTTGATATAAATTTAGATTACTTCGCGACGCCTTATTCCAAATACTAAAATACTGAAAATAATGAAAACGAGAGATGGTAAGAAAATCGAATTTAGACTTTTTTGTCGGTTTCGTCGAAAC 27 9069325 0.908371165 9 24 200 0.931034483 1.431363764 0.413793103 0.074074074 0.137931034 27 2 0 27 3R:9069292-9069416 8 pum FBtr0333667|FBtr0333668|FBtr0081993 9066341|9066341|9067576 9070944|9070944|9070944 CGAATTTA 8mer-A1 dme-miR-1006-3p 3R - 9069306 9069337 3'utr pum FlyBase G37215.1 TGGTAAGAAAATCGAATTTAGACTTTTTTGTC 7 9069326 0.970650807 3 6 53 0.857142857 0.77815125 0.285714286 0 0 7 1 0 6 3R:9069306-9069337 8 9 2943 FBgn0003165 2989.103333 65.03333333 99.94333333 0.003010936 0.138390569 0.090051029 0 1 0.5 0.2 dme-miR-2b-2-5p 6mer2-7 TGAAGA 3R 9070370 9070375 - 3R_9070370_9070375_- 0.9975844 0.963691482 0.980637941 0.023965899 pum FBtr0081993|FBtr0305197|FBtr0333668|FBtr0081994|FBtr0081990|FBtr0081992|FBtr0333667|FBtr0081991 9067576|9069755|9066341|9069755|9069755|9069755|9066341|9069755 9070944|9070944|9070944|9070944|9070944|9070944|9070944|9070944 3R - 9070369 9070442 3'utr pum FlyBase G49281.1 AATTATTATATAGCAAGTCTATCTGTAAATGATTAATGTTTCGACTGTAAATTAATAAGAAGACAACTGAAGAG 10 9070403 0.98930707 7 9 86 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 3R:9070369-9070442 6 pum FBtr0333667|FBtr0081991|FBtr0081990|FBtr0081992|FBtr0333668|FBtr0081994|FBtr0081993|FBtr0305197 9066341|9069755|9069755|9069755|9066341|9069755|9067576|9069755 9070944|9070944|9070944|9070944|9070944|9070944|9070944|9070944 TGAAGA 6mer2-7 dme-miR-2b-2-5p 3R - 9070358 9070416 3'utr pum FlyBase G37220.1 AAATGATTAATGTTTCGACTGTAAATTAATAAGAAGACAACTGAAGAGCCGGCGAGCTG 10 9070395 0.972702496 6 10 49 1 1.322219295 0.19047619 0.7 0.857142857 10 0 0 21 3R:9070358-9070416 6 2.5 2944 FBgn0003165 2989.103333 65.03333333 99.94333333 0.000836371 0.038441825 0.025014175 28 20 24 0.2 dme-miR-965-3p 7mer-m8 TACGCTT 3R 9262231 9262237 + 3R_9262231_9262237_+ 0.619802315 0.620178748 0.619990532 0.000266155 VhaM8.9 FBtr0081978 9262171 9262590 3R + 9262202 9262590 3'utr VhaM8.9 FlyBase G41311.1 GGAGCAGGAGGAGCGAGAGGAGCTTGCGTTACGCTTTGTTATTTCGTCCCCCTTTTAAGTTGAAATTTGCCAACTTCTACTTCAATCCAACAGCGGATAAATTGTGTGTTTGTGTGTGTGCGGACAGCTGTCGCAGTAGTTGGTTTTATTATCTATAAATAAGTATTAAAAAACTTTTCAGTTTTCAATGCAGTTGCGGGCGTCGCAACAATTCCATAGAAATTTGTTACATTTTCCTGTTTTGTTGTACTTTTTAGGTTTATATATATATACGAATATGCACAACATACTCGCCAAGTCAGTCAGTTCTTCAAACGATTCATCATATGTAAATTATCAAAATGTGAAGTGTTGAAAAGTAAAGTTAAATATATATAGCCTAAAAAGAC 245 9262243 0.986978018 54 234 2045 0.954063604 1.954242509 0.130742049 0.126530612 0.243816254 245 11 2 270 3R:9262202-9262590 7 VhaM8.9 FBtr0081978 9262171 9262590 TACGCTT 7mer-m8 dme-miR-965-3p 3R + 9262203 9262537 3'utr VhaM8.9 FlyBase G31173.1 GAGCAGGAGGAGCGAGAGGAGCTTGCGTTACGCTTTGTTATTTCGTCCCCCTTTTAAGTTGAAATTTGCCAACTTCTACTTCAATCCAACAGCGGATAAATTGTGTGTTTGTGTGTGTGCGGACAGCTGTCGCAGTAGTTGGTTTTATTATCTATAAATAAGTATTAAAAAACTTTTCAGTTTTCAATGCAGTTGCGGGCGTCGCAACAATTCCATAGAAATTTGTTACATTTTCCTGTTTTGTTGTACTTTTTAGGTTTATATATATATACGAATATGCACAACATACTCGCCAAGTCAGTCAGTTCTTCAAACGATTCATCATATGTAAATTA 196 9262240 0.987083951 41 182 1597 0.942028986 2.414973348 0.09057971 0.31122449 0.510869565 196 16 0 260 3R:9262203-9262537 7 119 2945 FBgn0037671 995.7833333 82.36 125.1466667 0.119503908 1.444876153 0.950884296 -12 -9 -10.5 0.2 dme-miR-932-5p 7mer-A1 GAATTGA 3R 9265156 9265162 - 3R_9265156_9265162_- 0.626576707 0.649274838 0.637925773 0.01604998 Aats-trp FBtr0081981 9265025 9265303 3R - 9265098 9265182 3'utr Aats-trp FlyBase G49330.1 TCTATGTAAATAGCTATACAGAATTGATCTATGCCTTGGCTCTGAGTCCGTGTGGCGCCCACTTAATGCATCGTTGTACTCGCTA 188 9265159 0.816930697 15 173 1501 0.92760181 1.834632606 0.045248869 0.14893617 0.2760181 188 14 2 205 3R:9265098-9265182 7 Aats-trp FBtr0081981 9265025 9265303 GAATTGA 7mer-A1 dme-miR-932-5p 3R - 9265097 9265182 3'utr Aats-trp FlyBase G37261.1 TCTATGTAAATAGCTATACAGAATTGATCTATGCCTTGGCTCTGAGTCCGTGTGGCGCCCACTTAATGCATCGTTGTACTCGCTAT 115 9265159 0.825906891 12 108 907 0.924731183 2.235528447 0.032258065 0.426086957 0.64516129 115 14 0 172 3R:9265097-9265182 7 129.5 2946 FBgn0010803 589.9133333 43.03333333 65.91666667 0.219523772 3.00929512 1.96460177 -3 -3 -3 0.2 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 9337092 9337099 + 3R_9337092_9337099_+ 0.62292977 0.623205747 0.623067758 0.000195091 CG8121 FBtr0082019|FBtr0082017|FBtr0082018 9336879|9336879|9336879 9337256|9337459|9337256 3R + 9337060 9337123 3'utr CG8121 FlyBase G41326.1 CCGCGAATCAGCGTAATTAGTTGTAAGTCTATTCCGTCCAAACGCATATGTTTTTTGTATACTG 2080 9337091 0.771501834 9 2052 17253 0.987304274 2.367914739 0.185780787 0.118269231 0.223867964 2080 21 9 2333 3R:9337060-9337123 8 CG8121 FBtr0082018|FBtr0082019|FBtr0082017 9336879|9336879|9336879 9337256|9337256|9337459 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R + 9337063 9337146 3'utr CG8121 FlyBase G31184.1 CGAATCAGCGTAATTAGTTGTAAGTCTATTCCGTCCAAACGCATATGTTTTTTGTATACTGTTGAAGAATCGCTGTCTTTATGT 1227 9337091 0.793610762 11 1204 9760 0.984324324 2.260309946 0.165945946 0.380603097 0.589189189 1227 20 9 1821 3R:9337063-9337146 8 1650 2947 FBgn0037680 158.3566667 13.87333333 21.06666667 10.41951712 118.9332052 78.32278481 1 1 1 0.2 dme-miR-263a-5p 6mer3-8 GTGCCA 3R 9358416 9358421 + 3R_9358416_9358421_+ 0.689657757 0.450219268 0.569938512 0.169308587 CG45050 FBtr0344364|FBtr0344370|FBtr0344363|FBtr0344367|FBtr0344369|FBtr0344365|FBtr0344368|FBtr0344366 9358403|9358403|9358403|9358403|9358403|9358403|9358403|9358403 9359189|9359189|9362994|9362994|9359189|9362994|9359189|9362994 3R + 9358398 9358516 stop_codon CG45050 FlyBase G41342.2 GATTTGAATTTCGATATTGTGCCAGTAACAGTAACAGTAGCCGTAGAATGATAATAACCAACTACACATGATAAGAGTACATATATATATATATGCTGCGCTATAACAAGGAAAGCAAC 57 9358415 0.973300235 18 53 331 0.9375 1.77815125 0.1875 0.105263158 0.203125 57 4 0 60 3R:9358398-9358516 6 CG45050 FBtr0344367|FBtr0344363|FBtr0344370|FBtr0344364|FBtr0344366|FBtr0344368|FBtr0344365|FBtr0344369 9358403|9358403|9358403|9358403|9358403|9358403|9358403|9358403 9362994|9362994|9359189|9359189|9362994|9359189|9362994|9359189 GTGCCA 6mer3-8 dme-miR-263a-5p 3R + 9358394 9358516 stop_codon CG45050 FlyBase G31201.1 AAAAGATTTGAATTTCGATATTGTGCCAGTAACAGTAACAGTAGCCGTAGAATGATAATAACCAACTACACATGATAAGAGTACATATATATATATATGCTGCGCTATAACAAGGAAAGCAAC 33 9358414 0.970867391 13 31 182 0.944444444 1.707570176 0.222222222 0.484848485 0.685185185 33 3 0 51 3R:9358394-9358516 6 20.5 2948 FBgn0266410 13462.35667 672.7966667 1034.65 0.001522765 0.03046983 0.019813463 1 2 1.5 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 3R 9368024 9368029 - 3R_9368024_9368029_- 0.962435748 0.999979811 0.98120778 0.026547688 FER FBtr0333295|FBtr0082054|FBtr0082053|FBtr0082051|FBtr0082052|FBtr0333296 9367601|9367601|9367601|9367601|9367601|9367601 9368240|9368240|9368240|9368240|9368240|9368240 3R - 9367962 9368079 3'utr FER FlyBase G49345.1 ATATATATTTTCTAGCCATGTAAATGTAAATTTCGATGTGTACTGTAGTGTGTGTTTGCCTGACTGAGCGTATGTTATAAATCCTTAATGTGCCAAAAACCGCAAGAGATCTTAAAAC 50 9368022 0.983521793 18 49 380 0.981481481 1.72427587 0.185185185 0.08 0.148148148 50 1 0 53 3R:9367962-9368079 6 FER FBtr0082052|FBtr0333296|FBtr0082053|FBtr0082051|FBtr0333295|FBtr0082054 9367601|9367601|9367601|9367601|9367601|9367601 9368240|9368240|9368240|9368240|9368240|9368240 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 9367976 9368077 3'utr FER FlyBase G37273.1 ATATATTTTCTAGCCATGTAAATGTAAATTTCGATGTGTACTGTAGTGTGTGTTTGCCTGACTGAGCGTATGTTATAAATCCTTAATGTGCCAAAAACCGCA 26 9368021 0.988657695 13 24 224 0.888888889 1.505149978 0.416666667 0.346153846 0.527777778 26 4 0 32 3R:9367976-9368077 6 23 2949 FBgn0000723 580.6066667 19.26 29.57333333 0.039613737 1.194184839 0.777727683 -7 -8 -7.5 0.2 dme-miR-276a-3p 6mer2-7 GTTCCT 3R 9407808 9407813 + 3R_9407808_9407813_+ 0.999408161 0.997279737 0.998343949 0.001505077 CG8135 FBtr0082030 9407708 9407857 3R + 9407741 9407825 3'utr CG8135 FlyBase G41359.1 TCGTTACCGAGTATCTCAATATTTCGCTCGCGCTTAAGTATTTCCCGATGCCACTGCTGCTGCTGCTGTTCCTTTACACCCATGT 39 9407814 0.982540892 12 37 357 0.954545455 1.62324929 0.045454545 0.128205128 0.227272727 39 2 0 42 3R:9407741-9407825 6 CG8135 FBtr0082030 9407708 9407857 GTTCCT 6mer2-7 dme-miR-276a-3p 3R + 9407765 9407825 3'utr CG8135 FlyBase G31212.1 CGCTCGCGCTTAAGTATTTCCCGATGCCACTGCTGCTGCTGCTGTTCCTTTACACCCATGT 32 9407802 0.766737283 11 29 303 0.953488372 1.311753861 0 0.25 0.441860465 32 1 1 41 3R:9407765-9407825 6 27.5 2950 FBgn0037689 259 11.38666667 17.50333333 0.106177606 2.415105386 1.571129309 -6 6 0 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 9417032 9417038 + 3R_9417032_9417038_+ 0.734681846 0.762204965 0.748443406 0.019461841 alpha-Man-II FBtr0082031|FBtr0082031|FBtr0082031|FBtr0334302|FBtr0334302|FBtr0334302 9416737|9416737|9416737|9416737|9416737|9416737 9417264|9417264|9417264|9417264|9417264|9417264 3R + 9417023 9417061 3'utr alpha-Man-II FlyBase G41367.1 ACGTTTTTTTGTGATATCCATCCAGTCCCACAGCAAGCA 10 9417043 0.954162842 4 10 57 1 1 0.3 0 0 10 0 0 10 3R:9417023-9417061 7 alpha-Man-II FBtr0334302|FBtr0334302|FBtr0334302|FBtr0082031|FBtr0082031|FBtr0082031 9416737|9416737|9416737|9416737|9416737|9416737 9417264|9417264|9417264|9417264|9417264|9417264 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 9417023 9417060 3'utr alpha-Man-II FlyBase G31216.1 ACGTTTTTTTGTGATATCCATCCAGTCCCACAGCAAGC 12 9417031 0.958834939 3 12 90 1 1.255272505 0.166666667 0.5 0.666666667 12 0 0 18 3R:9417023-9417060 7 10.5 2951 FBgn0011740 533.3733333 16.09 24.62333333 0.019686024 0.652579242 0.4264248 -11 1 -5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 9446922 9446929 + 3R_9446922_9446929_+ 0.630506447 0.630519282 0.630512864 9.12E-06 ps FBtr0082037|FBtr0111030 9446525|9446525 9449468|9449468 3R + 9446714 9446998 3'utr ps FlyBase G41395.1 TAATTTGGCCCTAGAGCCCATTAGACATAGAAACAAAAGCCAAGCAGACACAGGCACATCATTGCAGACTCATTCCAGAGAGAGAAAAGAGGGTACGACTTATTGAGAGAGATATCCCATTCTAAGCATACAACGCATTCCGTGAGACATTCCGATAGACATTCGCAAAGGCTTTCCCAATAAATTCATTGACACTTATAGCGAAATTTCTAGTCAAGTTCTTGCCTCTCACCCATCCGCCAGCATATATGATCCATGATCCATGATCCGTCTTCGATATTGCAC 1093 9446921 0.966116545 44 1050 8281 0.965883245 2.628048173 0.081122062 0.16010979 0.304018196 1093 43 2 1274 3R:9446714-9446998 8 ps FBtr0082037|FBtr0111030 9446525|9446525 9449468|9449468 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 9446751 9446954 3'utr ps FlyBase G31242.1 AGCCAAGCAGACACAGGCACATCATTGCAGACTCATTCCAGAGAGAGAAAAGAGGGTACGACTTATTGAGAGAGATATCCCATTCTAAGCATACAACGCATTCCGTGAGACATTCCGATAGACATTCGCAAAGGCTTTCCCAATAAATTCATTGACACTTATAGCGAAATTTCTAGTCAAGTTCTTGCCTCTCACCCATCCGCC 612 9446921 0.982250215 24 587 4363 0.962039046 2.470802365 0.093275488 0.35130719 0.569414317 612 33 2 887 3R:9446751-9446954 8 755 2952 FBgn0261552 4666.596667 115.7866667 177.5266667 0.161788141 6.520612621 4.252882196 1 1 1 0.2 dme-miR-92b-3p 8mer-m1 GTGCAATT 3R 9447239 9447246 + 3R_9447239_9447246_+ 0.56389307 0.576729601 0.570311335 0.009076776 ps FBtr0082037|FBtr0111030 9446525|9446525 9449468|9449468 3R + 9447049 9447262 3'utr ps FlyBase G41396.1 CCCAACCCAGAAAATTCGCACAGAACAGCAGCATCCGATAGCTTAGGATTATAAGGCAGTAATTAGGTTTAGCAGTTAGGTTGTGCATTGAGTAGATTGAATAAAACACATTCACTTTTCCATGTTGTTTAGGCCTAACGAATTTGTTCGATATACTTACGTGTAGCTGGGCGGATCGCCCAGTTGGCTAGTGCAATTCGTGGGTAACCATGCG 97 9447233 0.984852961 35 84 664 0.885964912 2.004321374 0.201754386 0.164948454 0.289473684 97 13 0 101 3R:9447049-9447262 8 ps FBtr0082037|FBtr0111030 9446525|9446525 9449468|9449468 GTGCAATT 8mer-m1 dme-miR-92b-3p 3R + 9447166 9447264 3'utr ps FlyBase G31245.1 TTCCATGTTGTTTAGGCCTAACGAATTTGTTCGATATACTTACGTGTAGCTGGGCGGATCGCCCAGTTGGCTAGTGCAATTCGTGGGTAACCATGCGTA 33 9447233 0.975344911 14 33 207 1 1.755874856 0.192982456 0.424242424 0.666666667 33 0 0 57 3R:9447166-9447264 8 29.5 2953 FBgn0261552 4666.596667 115.7866667 177.5266667 0.006321523 0.254778904 0.166172218 6 6 6 0.2 dme-miR-980-5p 7mer-A1 AAAAACA 3R 9449286 9449292 + 3R_9449286_9449292_+ 0.644490792 0.774706361 0.709598577 0.092076334 ps FBtr0111032|FBtr0302692|FBtr0082037|FBtr0344283|FBtr0111030 9447848|9447848|9446525|9447848|9446525 9455500|9455500|9449468|9455500|9449468 3R + 9449282 9449346 5'utr ps FlyBase G41408.1 AAAAAAAAACACATTGCGATTTGTTAGTTGCCAGTCTGAGAACTGCACTTCTTACCTTTTTACTT 43 9449309 0.918239051 12 42 333 0.965517241 1.271066772 0.189655172 0.255813953 0.448275862 43 0 2 56 3R:9449282-9449346 7 ps FBtr0111032|FBtr0344283|FBtr0082037|FBtr0111030|FBtr0302692 9447848|9447848|9446525|9446525|9447848 9455500|9455500|9449468|9449468|9455500 AAAAACA 7mer-A1 dme-miR-980-5p 3R + 9449281 9449342 5'utr ps FlyBase G31252.1 AAAAAAAAAACACATTGCGATTTGTTAGTTGCCAGTCTGAGAACTGCACTTCTTACCTTTTT 16 9449308 0.979999002 10 16 118 1 1.361727836 0.217391304 0.3125 0.52173913 16 0 0 23 3R:9449281-9449342 7 21.5 2954 FBgn0261552 4666.596667 115.7866667 177.5266667 0.004607212 0.18568632 0.121108566 -23 -22 -22.5 0.2 dme-miR-1012-3p 7mer-m8 TTGACTA 3R 9449927 9449933 + 3R_9449927_9449933_+ 0.501774607 0.517291083 0.509532845 0.010971822 ps FBtr0111032|FBtr0302692|FBtr0344283 9447848|9447848|9447848 9455500|9455500|9455500 3R + 9449918 9449944 3'utr ps FlyBase G41412.1 AAATAAAATTTGACTACAAAACCAACA 7 9449927 0.95609763 3 5 23 0.8 0.903089987 0 0.428571429 0.6 7 2 0 8 3R:9449918-9449944 7 ps FBtr0111032|FBtr0344283|FBtr0302692 9447848|9447848|9447848 9455500|9455500|9455500 TTGACTA 7mer-m8 dme-miR-1012-3p 3R + 9449910 9449940 3'utr ps FlyBase G31255.1 CGAAATTTAAATAAAATTTGACTACAAAACC 5 9449927 0.900985604 2 5 22 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:9449910-9449940 7 5.5 2955 FBgn0261552 4666.596667 115.7866667 177.5266667 0.001178589 0.047501152 0.030981261 0 0 0 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 9451274 9451281 + 3R_9451274_9451281_+ 0.612126965 0.605357093 0.608742029 0.004787042 ps FBtr0111032|FBtr0111032|FBtr0111032|FBtr0302692|FBtr0302692|FBtr0302692|FBtr0344283|FBtr0344283|FBtr0344283 9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848 9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500 3R + 9451253 9451297 3'utr ps FlyBase G41415.2 ATACTTATATTTGTACTGGATCTGTGATATGTATTTAAAAACAAC 198 9451273 0.833646553 11 193 2175 0.974358974 2.357934847 0.05982906 0.176767677 0.303418803 198 6 0 228 3R:9451253-9451297 8 ps FBtr0111032|FBtr0111032|FBtr0111032|FBtr0344283|FBtr0344283|FBtr0344283|FBtr0302692|FBtr0302692|FBtr0302692 9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848 9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 9451253 9451301 3'utr ps FlyBase G31256.1 ATACTTATATTTGTACTGGATCTGTGATATGTATTTAAAAACAACAAAG 159 9451273 0.795989041 12 153 1644 0.974895397 2.367355921 0.129707113 0.364779874 0.577405858 159 6 0 233 3R:9451253-9451301 8 177.5 2956 FBgn0261552 4666.596667 115.7866667 177.5266667 0.038036285 1.532991709 0.999849788 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 9453053 9453059 + 3R_9453053_9453059_+ 0.796286433 0.800352859 0.798319646 0.00287545 ps FBtr0111032|FBtr0111032|FBtr0111032|FBtr0302692|FBtr0302692|FBtr0302692|FBtr0344283|FBtr0344283|FBtr0344283 9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848 9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500 3R + 9453030 9453070 3'utr ps FlyBase G41419.1 AAGGTATAAAACGTAGTCGTTAGTGTGATAAATAAAATTAA 11 9453051 0.976462237 6 11 78 1 1.113943352 0.076923077 0.181818182 0.307692308 11 0 0 13 3R:9453030-9453070 7 ps FBtr0111032|FBtr0111032|FBtr0111032|FBtr0344283|FBtr0344283|FBtr0344283|FBtr0302692|FBtr0302692|FBtr0302692 9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848 9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 9453016 9453071 3'utr ps FlyBase G31258.1 ATACACATACACTAAAGGTATAAAACGTAGTCGTTAGTGTGATAAATAAAATTAAT 8 9453052 0.975598725 4 8 52 1 1.041392685 0.181818182 0.375 0.545454545 8 0 0 11 3R:9453016-9453071 7 8.5 2957 FBgn0261552 4666.596667 115.7866667 177.5266667 0.001821456 0.073410871 0.047880131 2 1 1.5 0.2 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3R 9506042 9506047 - 3R_9506042_9506047_- 0.889328222 0.907297885 0.898313053 0.012706497 rump FBtr0304684|FBtr0082123 9505851|9505851 9507316|9506143 3R - 9506025 9506155 stop_codon rump FlyBase G49389.1 ACATACTTTTAAGTCAGGCAATTCAGTTCAAAAGTTATTCTACGTTTCTTGTCGCCAATTCACACTTCAAACAGCGCGATGACCAATGAAATGAGCTGATATTCCTTATTTGACTCGCAATACGGAATTAA 30 9506045 0.984167922 11 29 228 0.96875 1.491361694 0.3125 0.066666667 0.125 30 1 0 31 3R:9506025-9506155 6 rump FBtr0304684|FBtr0082123 9505851|9505851 9507316|9506143 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3R - 9506025 9506084 3'utr rump FlyBase G37306.1 CAGCGCGATGACCAATGAAATGAGCTGATATTCCTTATTTGACTCGCAATACGGAATTAA 15 9506046 0.828823174 8 15 100 1 1.322219295 0.238095238 0.266666667 0.476190476 15 0 0 21 3R:9506025-9506084 6 11.5 2958 FBgn0267790 1132.323333 61.17 93.53666667 0.01015611 0.188000654 0.122946438 -2 -1 -1.5 0.2 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 9507272 9507278 - 3R_9507272_9507278_- 0.739778079 0.737155613 0.738466846 0.001854388 rump FBtr0304684 9505851 9507316 3R - 9507095 9507364 stop_codon rump FlyBase G49398.2 AGAAGCTCAAGCAGGTCTTCAAGCTGGCCGGCAAGGTGCAGAGCGTAGACCTTTCACTGGACAAGGAGGGCAACAGCCGCGGTTTTGCTGTGATCGAGTACGACCATCCGGTGGAGGCTGTTCAGGCCATTTCCATGCTGGATCGTCAGATGCTATTCGACCGTCGTATGACCGTGCGCCTGGACCGAATTCCGGATAAGAATGAAGGCATAAAGCTGCCCGAGGGCTTGGGAGGTGTGGGCATCGGCCTGGGACCCAACGGCGAGCCAC 159 9507280 0.994492437 32 153 828 0.97382199 1.792391689 0.188481675 0.169811321 0.308900524 159 3 2 186 3R:9507095-9507364 7 rump FBtr0304684 9505851 9507316 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R - 9507131 9507318 stop_codon rump FlyBase G37314.1 AGACCTTTCACTGGACAAGGAGGGCAACAGCCGCGGTTTTGCTGTGATCGAGTACGACCATCCGGTGGAGGCTGTTCAGGCCATTTCCATGCTGGATCGTCAGATGCTATTCGACCGTCGTATGACCGTGCGCCTGGACCGAATTCCGGATAAGAATGAAGGCATAAAGCTGCCCGAGGGCTTGGGAG 89 9507280 0.973948721 21 82 503 0.943262411 2.123851641 0.219858156 0.449438202 0.65248227 89 8 0 133 3R:9507131-9507318 7 67.5 2959 FBgn0267790 1132.323333 61.17 93.53666667 0.059611948 1.103482099 0.721642137 2 2 2 0.2 dme-miR-92b-3p 8mer-m1 GTGCAATT 3R 9511342 9511349 - 3R_9511342_9511349_- 0.587311145 0.378906745 0.483108945 0.147364164 Ras85D FBtr0082122 9510559 9511507 3R - 9511330 9511379 3'utr Ras85D FlyBase G49409.1 AAACACACACATGTGGGAGCGTGTTGGTCGGTGCAATTGTCAGATAAAAG 28 9511343 0.864359564 6 27 156 0.967741935 1.477121255 0.258064516 0.107142857 0.193548387 28 1 0 30 3R:9511330-9511379 8 Ras85D FBtr0082122 9510559 9511507 GTGCAATT 8mer-m1 dme-miR-92b-3p 3R - 9511325 9511365 3'utr Ras85D FlyBase G37327.1 GGGAGCGTGTTGGTCGGTGCAATTGTCAGATAAAAGAAGAG 8 9511343 0.828602163 3 7 46 1 1.079181246 0.5 0.25 0.5 8 0 0 12 3R:9511325-9511365 8 15.5 2960 FBgn0003205 1314.34 81.98666667 125.6566667 0.011792991 0.189055131 0.123351991 -6 -6 -6 0.2 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 9536064 9536070 - 3R_9536064_9536070_- 0.441972664 0.402867493 0.422420079 0.027651552 mura FBtr0082116 9535623 9539095 3R - 9536022 9536096 3'utr mura FlyBase G49422.1 ACAAACAAAAAAAATTATAAAGTTTTGCTGTGATGTACGTTATATATATTTAATTACATAAAATGCAATAAAATT 185 9536072 0.991835807 10 178 1989 0.964444444 2.035429738 0.062222222 0.183783784 0.328888889 185 7 1 217 3R:9536022-9536096 7 mura FBtr0082116 9535623 9539095 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R - 9536043 9536096 3'utr mura FlyBase G37344.1 ACAAACAAAAAAAATTATAAAGTTTTGCTGTGATGTACGTTATATATATTTAAT 135 9536072 0.891468887 10 128 1418 0.930693069 2.274157849 0.059405941 0.333333333 0.554455446 135 14 0 188 3R:9536043-9536096 7 158.5 2961 FBgn0037705 215.4033333 4.16 6.31 0.73582891 38.10096154 25.11885895 2 2 2 0.2 dme-miR-79-3p 6mer3-8 TAGCTT 3R 9538817 9538822 - 3R_9538817_9538822_- 0.999887552 0.977440218 0.988663885 0.015872709 mura FBtr0082118|FBtr0082117|FBtr0082116 9538152|9538152|9535623 9539095|9539095|9539095 3R - 9538766 9538840 3'utr mura FlyBase G49428.1 AACTCGCCGCCTCTTCAATAGCTTGTCTTAGACATTAGTTCGTATGTGAGTAATGGTAACCGTAATTAGGAGTAA 24 9538822 0.987243422 7 24 208 1 1.397940009 0 0.041666667 0.08 24 0 0 25 3R:9538766-9538840 6 mura FBtr0082118|FBtr0082117|FBtr0082116 9538152|9538152|9535623 9539095|9539095|9539095 TAGCTT 6mer3-8 dme-miR-79-3p 3R - 9538795 9538838 3'utr mura FlyBase G37348.1 CTCGCCGCCTCTTCAATAGCTTGTCTTAGACATTAGTTCGTATG 13 9538813 0.845101812 4 10 116 0.823529412 0.84509804 0.058823529 0.230769231 0.411764706 13 2 1 14 3R:9538795-9538838 6 16.5 2962 FBgn0037705 215.4033333 4.16 6.31 0.076600486 3.966346154 2.614896989 0 -9 -4.5 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 9557507 9557514 + 3R_9557507_9557514_+ 0.625364264 0.618396913 0.621880589 0.004926696 CG8199 FBtr0082067 9557435 9557776 3R + 9557435 9557527 stop_codon CG8199 FlyBase G41466.2 AGATTCCAGATAGGTGCCATAAAGATGCTAACAAATCAGAAATCAAAACGAACCGAGAGACTCGATCGAAAGTGCATTTATTATGATTAAGCA 26 9557513 0.873772367 11 21 135 0.909090909 1.176091259 0.212121212 0.153846154 0.333333333 26 2 1 30 3R:9557435-9557527 8 CG8199 FBtr0082067 9557435 9557776 TGCATTTA 8mer-A1 dme-miR-277-3p 3R + 9557471 9557533 3'utr CG8199 FlyBase G31285.2 CAGAAATCAAAACGAACCGAGAGACTCGATCGAAAGTGCATTTATTATGATTAAGCAATAGGC 14 9557513 0.979985702 6 10 72 0.857142857 1.255272505 0.380952381 0.428571429 0.619047619 14 3 0 18 3R:9557471-9557533 8 10.5 2963 FBgn0037709 100.1133333 7.073333333 10.93 0.104881135 1.484448633 0.960658737 -6 -6 -6 0.2 dme-miR-79-3p 7mer-A1 AGCTTTA 3R 9561840 9561846 - 3R_9561840_9561846_- 0.411723343 0.79718388 0.604453611 0.272561804 CG9393 FBtr0332808 9561581 9562069 3R - 9561833 9562018 3'utr CG9393 FlyBase G49459.1 TTGATTCATCCTTGCAGCTAACGACACGCTCTTCGACGGACTACGATGGCATAGATTACGAGGATGACGAGATGGAGGAGGGCCTAGACTAATCGCATCTCTGCAACGATATCTATGTGTATAGTATATATATTTTAAAATACAATGTGGGGATGAAGCACAAAAACTGTCCAGCTTTAAAGGTTT 32 9561873 0.959580768 16 31 163 0.972972973 1.556302501 0.27027027 0.15625 0.27027027 32 1 0 36 3R:9561833-9562018 7 CG9393 FBtr0082113|FBtr0332808 9561581|9561581 9561926|9562069 AGCTTTA 7mer-A1 dme-miR-79-3p 3R - 9561832 9561882 3'utr CG9393 FlyBase G37375.1 AAAATACAATGTGGGGATGAAGCACAAAAACTGTCCAGCTTTAAAGGTTTA 10 9561871 0.821919384 5 7 54 0.769230769 1 0.076923077 0.3 0.461538462 10 3 0 10 3R:9561832-9561882 7 5 2964 FBgn0037710 257.9966667 21.42 32.78333333 0.019380095 0.233426704 0.152516523 27 25 26 0.2 dme-miR-965-3p 7mer-m8 TACGCTT 3R 9575015 9575021 - 3R_9575015_9575021_- 0.619315242 0.619533806 0.619424524 0.000154574 Kap-alpha3 FBtr0301189|FBtr0082108|FBtr0082106|FBtr0082107 9574962|9574482|9574962|9574482 9575473|9575473|9575473|9575473 3R - 9574972 9575075 3'utr Kap-alpha3 FlyBase G49473.1 AGATTTCAAAAAGAATGTAGACCTATTTGATTTATATGAAATTATTTAAATATTTACGCTTCTGATTTGTAATTGAAATTACATATGTATACATTTCTAACATG 76 9575022 0.990178922 12 76 761 1 1.954242509 0.033333333 0.171052632 0.3 76 0 0 90 3R:9574972-9575075 7 Kap-alpha3 FBtr0082108|FBtr0301189|FBtr0082107|FBtr0082106 9574482|9574962|9574482|9574962 9575473|9575473|9575473|9575473 TACGCTT 7mer-m8 dme-miR-965-3p 3R - 9574992 9575070 3'utr Kap-alpha3 FlyBase G37387.1 TCAAAAAGAATGTAGACCTATTTGATTTATATGAAATTATTTAAATATTTACGCTTCTGATTTGTAATTGAAATTACAT 36 9575022 0.843972863 10 35 331 0.955555556 1.633468456 0.044444444 0.25 0.4 36 2 0 43 3R:9574992-9575070 7 47 2965 FBgn0027338 3256.33 173.6 265.9533333 0.014433427 0.270737327 0.176722733 1 1 1 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 3R 9575200 9575205 - 3R_9575200_9575205_- 0.579345171 0.577655972 0.578500571 0.001194445 Kap-alpha3 FBtr0301189|FBtr0082108|FBtr0082106|FBtr0082107 9574962|9574482|9574962|9574482 9575473|9575473|9575473|9575473 3R - 9575186 9575236 3'utr Kap-alpha3 FlyBase G49475.1 CCGCTGCAGCCGTTTTAGCTTCTCTCAATTCTGTGTTAACAAAATTACAAA 45 9575208 0.750132505 4 41 459 0.92 1.662757832 0.08 0.111111111 0.2 45 4 0 46 3R:9575186-9575236 6 Kap-alpha3 FBtr0082108|FBtr0301189|FBtr0082107|FBtr0082106 9574482|9574962|9574482|9574962 9575473|9575473|9575473|9575473 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 9575185 9575228 3'utr Kap-alpha3 FlyBase G37389.1 GCCGTTTTAGCTTCTCTCAATTCTGTGTTAACAAAATTACAAAA 23 9575208 0.770431835 5 22 235 0.965517241 1.447158031 0.172413793 0.260869565 0.413793103 23 1 0 28 3R:9575185-9575228 6 33 2966 FBgn0027338 3256.33 173.6 265.9533333 0.010134108 0.190092166 0.124081919 3 3 3 0.2 dme-miR-11-3p 7mer-m1 TGTGATG 3R 9589304 9589310 + 3R_9589304_9589310_+ 0.610341259 0.612058541 0.6111999 0.001214244 P58IPK FBtr0082074 9589281 9589581 3R + 9589238 9589339 stop_codon P58IPK FlyBase G41500.1 TTCCAACACGGGTCGCCGTTCCAGTTCAAGTTCCACTTCAATTAGTCAGCCAGCAGCCATTTGCTTTGTGATGTCCTAGCCGCGATCCCCGATATCCTTTAA 31 9589303 0.984221303 14 29 226 0.942857143 1.51851394 0.114285714 0.129032258 0.228571429 31 2 0 33 3R:9589238-9589339 7 P58IPK FBtr0082074 9589281 9589581 TGTGATG 7mer-m1 dme-miR-11-3p 3R + 9589277 9589328 stop_codon P58IPK FlyBase G31308.1 AATTAGTCAGCCAGCAGCCATTTGCTTTGTGATGTCCTAGCCGCGATCCCCG 15 9589303 0.666256852 5 12 99 0.92 1.06069784 0.24 0.466666667 0.68 15 1 1 23 3R:9589277-9589328 7 17.5 2967 FBgn0037718 1190.153333 64.61333333 98.40666667 0.014703988 0.270841931 0.17783348 1 1 1 0.2 dme-miR-980-5p 6mer3-8 GAAAAA 3R 9589517 9589522 - 3R_9589517_9589522_- 0.752223428 0.790429951 0.77132669 0.027016146 bocksbeutel FBtr0100537|FBtr0082105 9589466|9589466 9589729|9589773 3R - 9589479 9589586 3'utr bocksbeutel FlyBase G49488.1 CAACTCAATTTGCCAAGTCTTTAATTGCTTGTTCTCGCATATTGTTTCTTTTTATACATAATTAGAAAAATGTACTACATTATAATTATTGTATTGTATTAAATAAAC 174 9589516 0.982220096 8 173 1289 0.99537037 2.33243846 0.041666667 0.224137931 0.375 174 1 0 215 3R:9589479-9589586 6 bocksbeutel FBtr0100537|FBtr0082105 9589466|9589466 9589729|9589773 GAAAAA 6mer3-8 dme-miR-980-5p 3R - 9589494 9589572 3'utr bocksbeutel FlyBase G37406.1 AAGTCTTTAATTGCTTGTTCTCGCATATTGTTTCTTTTTATACATAATTAGAAAAATGTACTACATTATAATTATTGTA 117 9589516 0.901874706 8 114 824 0.994117647 2.227886705 0.047058824 0.35042735 0.552941176 117 1 0 169 3R:9589494-9589572 6 138 2968 FBgn0037719 379.4166667 31.98333333 49.09 0.363716231 4.314747264 2.81116317 -6 -6 -6 0.2 dme-miR-986-5p 6mer3-8 ATTCGA 3R 9633826 9633831 - 3R_9633826_9633831_- 0.999848797 0.599804257 0.799826527 0.282874179 Scm FBtr0082102|FBtr0306008 9633357|9633659 9634337|9634337 3R - 9633780 9633863 3'utr Scm FlyBase G49505.1 ATGTGAAATAGTTCTCAATTGGACACAAAATGATTCGACTTTTTCGAAAACTGGAGCTCGGCTACCAAAATCGCAATGCACATA 27 9633822 0.975357758 13 25 176 0.945945946 1.544068044 0.459459459 0.222222222 0.432432432 27 2 0 35 3R:9633780-9633863 6 Scm FBtr0082102|FBtr0306008 9633357|9633659 9634337|9634337 ATTCGA 6mer3-8 dme-miR-986-5p 3R - 9633799 9633863 3'utr Scm FlyBase G37428.1 ATGTGAAATAGTTCTCAATTGGACACAAAATGATTCGACTTTTTCGAAAACTGGAGCTCGGCTAC 17 9633821 0.671716618 12 17 111 1 1.397940009 0.16 0.294117647 0.52 17 0 0 25 3R:9633799-9633863 6 8.5 2969 FBgn0003334 1178.256667 35.08 53.90333333 0.007214048 0.242303307 0.157689691 -9 -10 -9.5 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 3R 9634290 9634295 - 3R_9634290_9634295_- 0.628820362 0.436338697 0.532579529 0.136105115 Scm FBtr0082102|FBtr0306008 9633357|9633659 9634337|9634337 3R - 9634210 9634324 3'utr Scm FlyBase G49507.1 AAGTTTCAGGCAGCGGACTCGGTTCGGGTTTGACTTATATAGAAATTGTTAACAAATTAGTACCTCCCTTTAACGTAAAGCAAAGCAAACATGAACGATATTCATAGATGTGTTA 30 9634295 0.98122841 12 27 195 0.909090909 1.477121255 0.181818182 0.1 0.181818182 30 3 0 30 3R:9634210-9634324 6 Scm FBtr0082102|FBtr0306008 9633357|9633659 9634337|9634337 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 9634244 9634317 3'utr Scm FlyBase G37430.1 AGGCAGCGGACTCGGTTCGGGTTTGACTTATATAGAAATTGTTAACAAATTAGTACCTCCCTTTAACGTAAAGC 14 9634295 0.98226369 6 11 86 0.9 1.255272505 0.4 0.428571429 0.6 14 2 0 18 3R:9634244-9634317 6 11 2970 FBgn0003334 1178.256667 35.08 53.90333333 0.009335827 0.313568985 0.204069012 0 0 0 0.2 dme-miR-305-5p 7mer-A1 GTACAAA 3R 9684472 9684478 - 3R_9684472_9684478_- 0.687940097 0.631455889 0.659697993 0.039940361 eca FBtr0082098 9684467 9684666 3R - 9684467 9684492 3'utr eca FlyBase G49522.1 TAATAAAATCCATTGTACAAAACGAG 25 9684480 0.623698592 3 25 87 1 1.591064607 0 0.44 0.641025641 25 0 0 39 3R:9684467-9684492 7 eca FBtr0082098 9684467 9684666 GTACAAA 7mer-A1 dme-miR-305-5p 3R - 9684468 9684498 3'utr eca FlyBase G37441.1 GTAATTTAATAAAATCCATTGTACAAAACGA 20 9684480 0.699485405 2 19 77 1 1.462397998 0.034482759 0.4 0.586206897 20 0 0 29 3R:9684468-9684498 7 22 2971 FBgn0069242 341.4133333 44.61 67.42 0.064438022 0.493162968 0.326312667 2 2 2 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 3R 9684601 9684606 - 3R_9684601_9684606_- 0.994812088 0.999868576 0.997340332 0.003575485 eca FBtr0082098 9684467 9684666 3R - 9684503 9684635 3'utr eca FlyBase G49523.1 ACTGGCCAACCACTGGCCTCATTGTTCCGTGTGTTTCCCTCATTTGGCAGGAATTGCGAATTTCATCGATGGATCGTCATCCACCCAACCAGCCACTGGCCTCGACTCCAAGCACTTCTAGTTGTAATTTCTT 64 9684612 0.882363629 22 60 474 0.902777778 1.812913357 0.111111111 0.125 0.222222222 64 7 0 65 3R:9684503-9684635 6 eca FBtr0082098 9684467 9684666 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 9684581 9684633 3'utr eca FlyBase G37442.1 TGGCCAACCACTGGCCTCATTGTTCCGTGTGTTTCCCTCATTTGGCAGGAATT 21 9684611 0.777805302 9 20 178 0.966666667 1.462397998 0.166666667 0.380952381 0.566666667 21 1 0 29 3R:9684581-9684633 6 27.5 2972 FBgn0069242 341.4133333 44.61 67.42 0.080547528 0.61645371 0.407890834 6 5 5.5 0.2 dme-miR-92b-3p 8mer-A1 GTGCAATA 3R 9686731 9686738 + 3R_9686731_9686738_+ 0.625187791 0.623034216 0.624111004 0.001522825 CG18542 FBtr0082084 9686716 9687141 3R + 9686685 9686757 stop_codon CG18542 FlyBase G41532.1 ACCGACGGAGCAGCTTTGCACAAGCAAAACTAGTGCGTTACCAATGGTGCAATATAGATGATAGATAAATGGA 47 9686729 0.978039317 6 46 295 0.981132075 1.716003344 0.094339623 0.127659574 0.226415094 47 1 0 52 3R:9686685-9686757 8 CG18542 FBtr0082084 9686716 9687141 GTGCAATA 8mer-A1 dme-miR-92b-3p 3R + 9686716 9686771 stop_codon CG18542 FlyBase G31333.1 AGTGCGTTACCAATGGTGCAATATAGATGATAGATAAATGGATTCTGTGGAATCTT 16 9686729 0.976444182 2 16 112 1 1.447158031 0.178571429 0.4375 0.678571429 16 0 0 28 3R:9686716-9686771 8 29 2973 FBgn0037731 342.2866667 33.38666667 51.05666667 0.084724305 0.868610224 0.567996344 2 2 2 0.2 dme-miR-190-5p 6mer3-8 ACATAT 3R 9686816 9686821 + 3R_9686816_9686821_+ 0.999551267 0.991001258 0.995276263 0.006045763 CG18542 FBtr0082084 9686716 9687141 3R + 9686779 9686850 3'utr CG18542 FlyBase G41533.1 ATTTACGTATTTATTCTGTGAACTTTACATTCCAGTCACATATTGCGTCCCGAACTCAAATCACACCGAATT 84 9686808 0.797150919 13 82 510 0.981981982 1.736396502 0 0.238095238 0.423423423 84 1 1 109 3R:9686779-9686850 6 CG18542 FBtr0082084 9686716 9687141 ACATAT 6mer3-8 dme-miR-190-5p 3R + 9686784 9686842 3'utr CG18542 FlyBase G31334.1 CGTATTTATTCTGTGAACTTTACATTCCAGTCACATATTGCGTCCCGAACTCAAATCAC 54 9686808 0.76140962 8 51 343 0.974358974 1.880813592 0 0.333333333 0.538461538 54 2 0 76 3R:9686784-9686842 6 63.5 2974 FBgn0037731 342.2866667 33.38666667 51.05666667 0.185517013 1.901956869 1.243716132 8 8 8 0.2 dme-miR-190-5p 6mer3-8 ACATAT 3R 9694136 9694141 + 3R_9694136_9694141_+ 0.999960795 0.999967102 0.999963948 4.45E-06 CG32939 FBtr0082085 9694036 9694461 3R + 9694100 9694204 3'utr CG32939 FlyBase G41538.1 TTTACGTATTTATTCTGTGAACTTTACATTCCAGTCACATATTGCGTCCCGAACTCAAATCACACCGAATTATGCCCTTGATGGCGTTTCTTTATCGATTCGACA 87 9694128 0.979524128 7 78 548 0.887850467 1.977723605 0 0.172413793 0.327102804 87 12 0 95 3R:9694100-9694204 6 CG32939 FBtr0082085 9694036 9694461 ACATAT 6mer3-8 dme-miR-190-5p 3R + 9694114 9694159 3'utr CG32939 FlyBase G31337.1 CTGTGAACTTTACATTCCAGTCACATATTGCGTCCCGAACTCAAAT 64 9694128 0.731084878 6 54 370 0.901098901 1.612783857 0 0.3125 0.516483516 64 8 1 82 3R:9694114-9694159 6 71.5 2975 FBgn0052939 2.536666667 0.266666667 0.413333333 28.18659658 268.125 172.983871 8 8 8 0.2 dme-miR-184-5p 8mer-m1 TGATAAGG 3R 9714167 9714174 + 3R_9714167_9714174_+ 0.607563772 0.593916011 0.600739891 0.009650452 dmt FBtr0082086 9714126 9714675 3R + 9714155 9714186 3'utr dmt FlyBase G41554.1 TTTTTGTGTCGCTGATAAGGGGAAGTAGTCGT 5 9714169 0.819876762 3 5 31 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 3R:9714155-9714186 8 dmt FBtr0082086 9714126 9714675 TGATAAGG 8mer-m1 dme-miR-184-5p 3R + 9714156 9714201 3'utr dmt FlyBase G31351.1 TTTTGTGTCGCTGATAAGGGGAAGTAGTCGTTTTTAATTTAATGTG 9 9714180 0.796017454 5 9 71 1 1.113943352 0.307692308 0.333333333 0.538461538 9 0 0 13 3R:9714156-9714201 8 6.5 2976 FBgn0016792 1049.153333 39.87 61.16 0.006195472 0.163029847 0.106278613 -2 -13 -7.5 0.2 dme-miR-1008-3p 6mer2-7 GCTGTG 3R 9742021 9742026 + 3R_9742021_9742026_+ 0.993936401 0.999750595 0.996843498 0.00411126 Pnn FBtr0082126 9741975 9742156 3R + 9741993 9742051 3'utr Pnn FlyBase G41561.1 GGGCTTGAAATATGATCGTGCGGATATCGCTGTGTAGGGCAATTGGGTTTCAATTTATA 11 9742023 0.980493779 6 10 70 0.933333333 1.146128036 0.266666667 0.272727273 0.466666667 11 1 0 14 3R:9741993-9742051 6 Pnn FBtr0082126 9741975 9742156 GCTGTG 6mer2-7 dme-miR-1008-3p 3R + 9741982 9742040 3'utr Pnn FlyBase G31358.1 AGTTTGCACTAGGGCTTGAAATATGATCGTGCGGATATCGCTGTGTAGGGCAATTGGGT 17 9742027 0.963697146 7 17 94 1 1.397940009 0.2 0.352941176 0.56 17 0 0 25 3R:9741982-9742040 6 9.5 2977 FBgn0037737 459.6666667 41.47666667 63.47666667 0.02066715 0.229044443 0.149661293 -2 -6 -4 0.2 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3R 9754786 9754792 - 3R_9754786_9754792_- 0.610516812 0.596052117 0.603284465 0.010228087 Rpt3R FBtr0332172|FBtr0301536 9754733|9754733 9754897|9754897 3R - 9754770 9754813 3'utr Rpt3R FlyBase G49636.1 TCGAAATATATTAGTCAATACTGGTGCTTTAAATAAAAGAAAAT 11 9754785 0.850362932 4 11 87 1 1.079181246 0 0.090909091 0.166666667 11 0 0 12 3R:9754770-9754813 7 Rpt3R FBtr0301536|FBtr0332172 9754733|9754733 9754897|9754897 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3R - 9754771 9754802 3'utr Rpt3R FlyBase G37533.1 TAGTCAATACTGGTGCTTTAAATAAAAGAAAA 11 9754785 0.70010988 4 11 78 1 1.230448921 0.117647059 0.454545455 0.647058824 11 0 0 17 3R:9754771-9754802 7 11 2978 FBgn0037742 43.66666667 3.773333333 5.77 0.251908397 2.915194346 1.906412478 -7 -7 -7 0.2 dme-miR-305-5p 7mer-A1 GTACAAA 3R 9761834 9761840 - 3R_9761834_9761840_- 0.782900882 0.749694898 0.76629789 0.023480188 Snap24 FBtr0082163 9761303 9762210 3R - 9761810 9761858 3'utr Snap24 FlyBase G49643.1 TACTATTACTACACTCGTGTACAAATGGCAACCAGATGGCGCCGGAAAC 26 9761833 0.948163519 6 23 100 0.918918919 1.230448921 0 0.32 0.540540541 25 2 1 34 3R:9761810-9761858 7 Snap24 FBtr0082163 9761303 9762210 GTACAAA 7mer-A1 dme-miR-305-5p 3R - 9761811 9761852 3'utr Snap24 FlyBase G37539.1 TACTACACTCGTGTACAAATGGCAACCAGATGGCGCCGGAAA 19 9761833 0.931244553 4 17 69 0.793103448 1.361727836 0 0.315789474 0.551724138 19 6 0 23 3R:9761811-9761852 7 20.5 2979 FBgn0266720 491.6633333 32.04666667 48.65666667 0.041695198 0.639692116 0.421319449 -7 -7 -7 0.2 dme-miR-1008-3p 7mer-m8 AGCTGTG 3R 9765892 9765898 + 3R_9765892_9765898_+ 0.647020111 0.664623883 0.655821997 0.012447766 CG8478 FBtr0301870|FBtr0301871|FBtr0332171|FBtr0082133 9765837|9765837|9765837|9765837 9766135|9766135|9766135|9766135 3R + 9765843 9765916 3'utr CG8478 FlyBase G41599.1 AGCGATTCGTGTGTAGCCTAGTCTATGTCTAAGTTAAGTGCTGTGGCGTAGCTGTGGTCCGGTAACGGCGCGTT 15 9765884 0.928174759 9 11 112 0.611111111 0.740362689 0.222222222 0.133333333 0.277777778 15 6 1 11 3R:9765843-9765916 7 CG8478 FBtr0332171|FBtr0082133|FBtr0301870|FBtr0301871 9765837|9765837|9765837|9765837 9766135|9766135|9766135|9766135 AGCTGTG 7mer-m8 dme-miR-1008-3p 3R + 9765873 9765912 3'utr CG8478 FlyBase G31382.1 AAGTTAAGTGCTGTGGCGTAGCTGTGGTCCGGTAACGGCG 9 9765885 0.581625969 6 9 60 1 1.146128036 0.285714286 0.444444444 0.642857143 9 0 0 14 3R:9765873-9765912 7 8.5 2980 FBgn0037746 785.14 44.18333333 67.65666667 0.010826095 0.192380234 0.12563433 8 7 7.5 0.2 dme-miR-1006-3p 6mer2-7 GAATTT 3R 9766043 9766048 + 3R_9766043_9766048_+ 0.999999987 1 0.999999993 0 CG8478 FBtr0301870|FBtr0301871|FBtr0332171|FBtr0082133 9765837|9765837|9765837|9765837 9766135|9766135|9766135|9766135 3R + 9766007 9766075 3'utr CG8478 FlyBase G41600.1 ATTGTACACTTCAGCTGCACGACTGGACTGCTTTGTGAATTTTTTAGGTTTTCGTATGACATTCACACA 25 9766046 0.790926277 10 24 204 0.962962963 1.414973348 0.111111111 0.08 0.148148148 25 1 0 26 3R:9766007-9766075 6 CG8478 FBtr0332171|FBtr0082133|FBtr0301870|FBtr0301871 9765837|9765837|9765837|9765837 9766135|9766135|9766135|9766135 GAATTT 6mer2-7 dme-miR-1006-3p 3R + 9765987 9766062 3'utr CG8478 FlyBase G31383.1 GGTTACTCGAATGCTTATTAATTGTACACTTCAGCTGCACGACTGGACTGCTTTGTGAATTTTTTAGGTTTTCGTA 16 9766038 0.98730842 8 15 143 1 1.380211242 0.208333333 0.375 0.583333333 16 0 0 24 3R:9765987-9766062 6 11 2981 FBgn0037746 785.14 44.18333333 67.65666667 0.01401024 0.248962656 0.162585604 -3 5 1 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 9766376 9766382 - 3R_9766376_9766382_- 0.657917532 0.657954384 0.657935958 2.61E-05 MED6 FBtr0301873|FBtr0339719|FBtr0082161|FBtr0082162|FBtr0301872 9766029|9766029|9766029|9766029|9766029 9766440|9766440|9766440|9766440|9766440 3R - 9766349 9766399 3'utr MED6 FlyBase G49653.1 ATTAGTCCGAGTCCTTTGGCAGCTGCATAAAAGGCGCTGAATGCTGCCTGC 41 9766383 0.974589705 4 40 246 0.97826087 1.653212514 0.239130435 0.12195122 0.217391304 41 1 0 45 3R:9766349-9766399 7 MED6 FBtr0339719|FBtr0082161|FBtr0082162|FBtr0301872|FBtr0301873 9766029|9766029|9766029|9766029|9766029 9766440|9766440|9766440|9766440|9766440 GGCAGCT 7mer-m8 dme-miR-980-3p 3R - 9766345 9766399 3'utr MED6 FlyBase G37544.1 ATTAGTCCGAGTCCTTTGGCAGCTGCATAAAAGGCGCTGAATGCTGCCTGCATTT 37 9766384 0.972933767 5 36 218 0.981132075 1.716003344 0.188679245 0.324324324 0.528301887 37 1 0 52 3R:9766345-9766399 7 38 2982 FBgn0024330 320.2133333 23.55 36.04333333 0.118670886 1.61358811 1.054286507 1 2 1.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3R 9769498 9769504 + 3R_9769498_9769504_+ 0.797350361 0.822391835 0.809871098 0.017706944 CG8481 FBtr0100583|FBtr0082134 9769425|9769425 9770027|9770027 3R + 9769431 9769619 3'utr CG8481 FlyBase G41603.1 CAACGCCAGTAGTAGTGGGCTTGGCTAAATTGGGCCATACCCAGCCCGATCAGAGAGTGGCAGTGAACTAGTCAAATTGGCAAATGCTTGAAATTCTTTACGGGTTTTACCTGCCAGCAGCTGCTTCGAGCCATAACCTGTGGATGCCAGGCAGTCTGCCAAGTGCATGTGTGATTGCCTCGTTGCTCT 113 9769489 0.964284717 22 102 534 0.929078014 1.8162413 0.120567376 0.203539823 0.361702128 113 9 1 131 3R:9769431-9769619 7 CG8481 FBtr0100583|FBtr0082134 9769425|9769425 9770027|9770027 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 9769429 9769559 3'utr CG8481 FlyBase G31387.1 GTCAACGCCAGTAGTAGTGGGCTTGGCTAAATTGGGCCATACCCAGCCCGATCAGAGAGTGGCAGTGAACTAGTCAAATTGGCAAATGCTTGAAATTCTTTACGGGTTTTACCTGCCAGCAGCTGCTTCGA 113 9769490 0.959591984 13 107 496 0.95212766 2.252853031 0.138297872 0.451327434 0.670212766 113 9 0 179 3R:9769429-9769559 7 93 2983 FBgn0037747 197.4366667 16.77 25.65666667 0.471037126 5.545617174 3.624788879 9 8 8.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 9779385 9779391 + 3R_9779385_9779391_+ 0.750009733 0.742135054 0.746072393 0.005568183 RpS29 FBtr0334681|FBtr0334681|FBtr0334681 9778784|9778784|9778784 9779528|9779528|9779528 3R + 9779349 9779428 3'utr RpS29 FlyBase G41613.1 CACCAGTTGCATAAAGGCTTTTGATGCGGACTTTGATGTGATATGCAAAACTGGCAGGCCACTGAACCCATTTTTTATAT 31 9779369 0.979946844 11 31 217 1 1.544068044 0.257142857 0.129032258 0.228571429 31 0 0 35 3R:9779349-9779428 7 RpS29 FBtr0334681|FBtr0334681|FBtr0334681 9778784|9778784|9778784 9779528|9779528|9779528 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 9779353 9779398 3'utr RpS29 FlyBase G31401.1 AGTTGCATAAAGGCTTTTGATGCGGACTTTGATGTGATATGCAAAA 21 9779382 0.937852622 9 20 150 0.911764706 1.491361694 0.088235294 0.333333333 0.588235294 21 3 0 31 3R:9779353-9779398 7 17 2984 FBgn0261599 23525.90667 6343.63 9678.496667 0.000722608 0.002679854 0.001756471 16 3 9.5 0.2 dme-miR-282-5p 6mer3-8 AGAGGC 3R 9783827 9783832 - 3R_9783827_9783832_- 0.545818466 0.975976509 0.760897487 0.304167639 MtnA FBtr0334686 9783405 9783858 3R - 9783774 9783861 stop_codon MtnA FlyBase G49663.1 TGAGCTTTCCCCCAAAAAAGATCTGGAGTAGAGGCGCTGCATCTTGTCTCTCTACACACCCTGCAATAAATGTCCAATTAAAGTAATT 39 9783855 0.723290385 11 35 225 0.875 1.62324929 0.208333333 0.179487179 0.333333333 39 6 0 42 3R:9783774-9783861 6 MtnA FBtr0334686 9783405 9783858 AGAGGC 6mer3-8 dme-miR-282-5p 3R - 9783776 9783885 stop_codon MtnA FlyBase G37551.1 AAATCCGCCTGCGGCTGCTCCGAGTGAGCTTTCCCCCAAAAAAGATCTGGAGTAGAGGCGCTGCATCTTGTCTCTCTACACACCCTGCAATAAATGTCCAATTAAAGTAA 38 9783834 0.919425703 15 37 194 0.979166667 1.672097858 0.1875 0.263157895 0.416666667 38 1 0 47 3R:9783776-9783885 6 21 2985 FBgn0002868 684.99 284.0066667 426.33 0.030657382 0.073941926 0.049257617 23 2 12.5 0.2 dme-miR-12-5p 7mer-m8 AATACTC 3R 9786958 9786964 + 3R_9786958_9786964_+ 0.56833227 0.342349125 0.455340698 0.159794253 CG8500 FBtr0082139 9786856 9789323 3R + 9786921 9786982 3'utr CG8500 FlyBase G41618.1 GTCGAGCTGAAGTGAACGGAGACGACGGTGACAGACAAATACTCGCCTTGGGGCAGCACCCT 17 9786960 0.910717331 3 17 58 1 1.255272505 0.166666667 0.058823529 0.111111111 17 0 0 18 3R:9786921-9786982 7 CG8500 FBtr0082139 9786856 9789323 AATACTC 7mer-m8 dme-miR-12-5p 3R + 9786942 9786977 3'utr CG8500 FlyBase G31408.1 ACGACGGTGACAGACAAATACTCGCCTTGGGGCAGC 6 9786968 0.612596804 3 6 21 1 0.954242509 0 0.166666667 0.444444444 6 0 0 9 3R:9786942-9786977 7 10.5 2986 FBgn0037754 1099.76 38.82 59.79333333 0.009547538 0.270479134 0.175604861 -2 -10 -6 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3R 9787236 9787242 + 3R_9787236_9787242_+ 0.658295413 0.657865741 0.658080577 0.000303844 CG8500 FBtr0082139 9786856 9789323 3R + 9787207 9787272 3'utr CG8500 FlyBase G41620.1 ATATATTCTATTCGAGCCGATCAGATCTTTCTAGTCGCACAGAGACACGATACCACGTACTGCATA 187 9787235 0.756873768 10 185 1090 0.990950226 2.340444115 0.366515837 0.14973262 0.280542986 187 2 0 219 3R:9787207-9787272 7 CG8500 FBtr0082139 9786856 9789323 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 9787202 9787269 3'utr CG8500 FlyBase G31410.1 AGGTTATATATTCTATTCGAGCCGATCAGATCTTTCTAGTCGCACAGAGACACGATACCACGTACTGC 126 9787235 0.677542435 6 118 728 0.91959799 1.961421094 0.361809045 0.388888889 0.613065327 126 15 1 183 3R:9787202-9787269 7 147 2987 FBgn0037754 1099.76 38.82 59.79333333 0.133665527 3.786707883 2.458468057 1 1 1 0.2 dme-miR-980-3p 6mer2-7 GCAGCT 3R 9787871 9787876 + 3R_9787871_9787876_+ 0.999974886 0.99368077 0.996827828 0.004450601 CG8500 FBtr0082139 9786856 9789323 3R + 9787827 9787905 3'utr CG8500 FlyBase G41624.1 AATATGTATGTACAATTTTACACTTATTTGCTGAACTTTATTGAGCAGCTTGAACTTTCTCAGTAGTAGCCAGATCGAT 15 9787867 0.98823545 8 14 120 0.882352941 1.176091259 0.235294118 0.133333333 0.235294118 15 2 0 15 3R:9787827-9787905 6 CG8500 FBtr0082139 9786856 9789323 GCAGCT 6mer2-7 dme-miR-980-3p 3R + 9787852 9787882 3'utr CG8500 FlyBase G31415.1 ATTTGCTGAACTTTATTGAGCAGCTTGAACT 8 9787867 0.770603678 4 8 60 1 1.079181246 0 0.375 0.583333333 8 0 0 12 3R:9787852-9787882 6 9.5 2988 FBgn0037754 1099.76 38.82 59.79333333 0.008638248 0.244719217 0.158880589 4 4 4 0.2 dme-miR-283-5p 8mer-A1 TGATATTA 3R 9788236 9788243 + 3R_9788236_9788243_+ 0.592167251 0.591517812 0.591842532 0.000459266 CG8500 FBtr0082139 9786856 9789323 3R + 9788207 9788337 3'utr CG8500 FlyBase G41626.1 CAAATTGTTTCGCATAGTTTGCTGTTGTTTGATATTAAGAGGATAAGTTTTTTTAAATTTTACCAATCGGACTAAGTGAATGATATGCTTTAAACGCTGCTATACCAATTAGCCAAATAGAGGGGCATGTA 19 9788234 0.991101359 15 19 193 1 1.322219295 0.380952381 0.105263158 0.19047619 19 0 0 21 3R:9788207-9788337 8 CG8500 FBtr0082139 9786856 9789323 TGATATTA 8mer-A1 dme-miR-283-5p 3R + 9788216 9788248 3'utr CG8500 FlyBase G31416.1 TCGCATAGTTTGCTGTTGTTTGATATTAAGAGG 7 9788234 0.637901778 5 7 69 1 0.954242509 0.555555556 0.285714286 0.444444444 7 0 0 9 3R:9788216-9788248 8 9 2989 FBgn0037754 1099.76 38.82 59.79333333 0.008183604 0.231839258 0.150518452 2 2 2 0.2 dme-miR-1003-3p 6mer2-7 TGTGAG 3R 9789053 9789058 - 3R_9789053_9789058_- 0.854689892 0.595340417 0.725015154 0.18338779 CG12945 FBtr0113214|FBtr0334685 9788850|9788850 9789429|9789429 3R - 9788984 9789150 3'utr CG12945 FlyBase G49668.1 AATTTTTATATGTAACTTGTTGATCATTTATATTTACAACTTGGCGCTCAGGCGATTATTAATAATAATATTATTAGCAGTGGGCGCTCATTTGTGAGTTGCGTATTAATTGAATGTAAGCGATAATTAAATATTCGGTTTTCGAATCTTGTAAAATCTAATTTAAT 26 9789052 0.987303378 13 26 236 1 1.447158031 0.392857143 0.076923077 0.142857143 26 0 0 28 3R:9788984-9789150 6 CG12945 FBtr0334685|FBtr0113214 9788850|9788850 9789429|9789429 TGTGAG 6mer2-7 dme-miR-1003-3p 3R - 9789023 9789076 3'utr CG12945 FlyBase G37554.1 TAGCAGTGGGCGCTCATTTGTGAGTTGCGTATTAATTGAATGTAAGCGATAATT 10 9789052 0.912623744 5 10 78 1 1.146128036 0.5 0.4 0.571428571 10 0 0 14 3R:9789023-9789076 6 12 2990 FBgn0037755 425.2633333 24.99 38.05666667 0.02821781 0.480192077 0.315319261 -6 -6 -6 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 9789276 9789283 - 3R_9789276_9789283_- 0.500067765 0.499986565 0.500027165 5.74E-05 CG12945 FBtr0113214|FBtr0334685 9788850|9788850 9789429|9789429 3R - 9789239 9789309 3'utr CG12945 FlyBase G49669.1 AAATTTTTATTTAAATTATTTTGCATGTACTTAATCTCATTTGCGCGATAAGTGTTATTAAGATAAATCTT 133 9789284 0.743506749 15 127 1299 0.968152866 2.181843588 0.038216561 0.135338346 0.267515924 133 5 0 152 3R:9789239-9789309 8 CG12945 FBtr0334685|FBtr0113214 9788850|9788850 9789429|9789429 GTACTTAA 8mer-A1 dme-miR-252-5p 3R - 9789241 9789307 3'utr CG12945 FlyBase G37556.2 ATTTTTATTTAAATTATTTTGCATGTACTTAATCTCATTTGCGCGATAAGTGTTATTAAGATAAATC 85 9789284 0.738066613 12 82 763 0.9609375 1.788875116 0.09375 0.364705882 0.578125 85 4 1 123 3R:9789241-9789307 8 100 2991 FBgn0037755 425.2633333 24.99 38.05666667 0.235148418 4.00160064 2.627660506 1 1 1 0.2 dme-miR-305-5p 7mer-A1 GTACAAA 3R 9797271 9797277 + 3R_9797271_9797277_+ 0.744929315 0.734725566 0.739827441 0.007215105 CG8516 FBtr0082141 9797002 9797754 3R + 9797239 9797339 3'utr CG8516 FlyBase G41640.1 TAGAATATAGCATAGCTTTAGGTTGAATTTGTGTACAAACTATTTGTATGAACGGCTCGACAATTGCTTCCGGGCGAGGGTGGGTAATCGCTCCAAGTATC 72 9797267 0.783196837 10 69 642 0.989010989 1.954242509 0.197802198 0.236111111 0.395604396 72 1 0 90 3R:9797239-9797339 7 CG8516 FBtr0082141 9797002 9797754 GTACAAA 7mer-A1 dme-miR-305-5p 3R + 9797231 9797326 3'utr CG8516 FlyBase G31430.1 TTGCCCTTTAGAATATAGCATAGCTTTAGGTTGAATTTGTGTACAAACTATTTGTATGAACGGCTCGACAATTGCTTCCGGGCGAGGGTGGGTAAT 45 9797267 0.794954015 9 40 361 0.942028986 1.812913357 0.202898551 0.4 0.608695652 45 4 0 65 3R:9797231-9797326 7 42 2992 FBgn0037757 595.6666667 20.49666667 31.43 0.070509233 2.049113677 1.336302895 4 4 4 0.2 dme-miR-318-3p 6mer2-7 CCAGTG 3R 9797369 9797374 + 3R_9797369_9797374_+ 0.695423543 0.934948903 0.815186223 0.169370035 CG8516 FBtr0082141 9797002 9797754 3R + 9797350 9797407 3'utr CG8516 FlyBase G41641.1 TTATTATTCTATCTCAGTACCAGTGCGTCCTATTTTAGGTAAATTAAAGGCAGGGGTC 16 9797380 0.980407145 7 15 122 1 1.278753601 0.157894737 0.125 0.263157895 16 0 0 19 3R:9797350-9797407 6 CG8516 FBtr0082141 9797002 9797754 CCAGTG 6mer2-7 dme-miR-318-3p 3R + 9797359 9797391 3'utr CG8516 FlyBase G31431.1 TATCTCAGTACCAGTGCGTCCTATTTTAGGTAA 6 9797381 0.622931107 3 4 51 0.461538462 0.77815125 0 0.5 0.769230769 6 7 0 6 3R:9797359-9797391 6 9.5 2993 FBgn0037757 595.6666667 20.49666667 31.43 0.015948517 0.463489998 0.302258988 -11 -12 -11.5 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 3R 9797915 9797921 - 3R_9797915_9797921_- 0.521137649 0.447634513 0.484386081 0.05197454 CG9467 FBtr0082156 9797767 9798459 3R - 9797867 9797963 3'utr CG9467 FlyBase G49680.1 AAACAGCCAATCAGTTGATTGTCAACCTTGAAGATGATTACTTGTGATTAAAATCGATAGAGCGACTGCTTCAAATTCGAATCTGTCCTGTTGCATG 62 9797923 0.762414697 20 60 494 0.961038961 1.568201724 0.051948052 0.209677419 0.363636364 62 2 1 74 3R:9797867-9797963 7 CG9467 FBtr0082156 9797767 9798459 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 9797909 9797962 3'utr CG9467 FlyBase G37561.2 AACAGCCAATCAGTTGATTGTCAACCTTGAAGATGATTACTTGTGATTAAAATC 18 9797926 0.656996925 9 17 130 0.925925926 1.397940009 0.037037037 0.277777778 0.518518519 18 2 0 25 3R:9797909-9797962 7 25.5 2994 FBgn0037758 388.19 14.69 22.38 0.065689482 1.735874745 1.139410188 2 5 3.5 0.2 dme-miR-14-3p 6mer3-8 AAGACT 3R 9798079 9798084 - 3R_9798079_9798084_- 0.99993147 0.979667917 0.989799694 0.014328529 CG9467 FBtr0082156 9797767 9798459 3R - 9797968 9798105 3'utr CG9467 FlyBase G49681.1 AAACCATGTAAACCAGAGTATAAGACTTCTGCAACCGATCATCTATAATTAGCACAACTCTCCTAAAGGGTGCTCCATCAGGACAGATACGAAATCGTTCGGCTTGGATAAGATTGGTTGCCTTAAGCAAAGAAAGTT 120 9798076 0.962533558 12 111 621 0.921428571 1.633468456 0.042857143 0.125 0.25 120 9 2 129 3R:9797968-9798105 6 CG9467 FBtr0082156 9797767 9798459 AAGACT 6mer3-8 dme-miR-14-3p 3R - 9798059 9798104 3'utr CG9467 FlyBase G37563.1 AACCATGTAAACCAGAGTATAAGACTTCTGCAACCGATCATCTATA 70 9798076 0.72754091 5 61 349 0.857142857 1.62324929 0.091836735 0.285714286 0.489795918 70 13 1 84 3R:9798059-9798104 6 89 2995 FBgn0037758 388.19 14.69 22.38 0.229269172 6.058543227 3.976764969 -8 -8 -8 0.2 dme-miR-305-3p 6mer3-8 ATGTGC 3R 9798239 9798244 - 3R_9798239_9798244_- 0.997750614 0.960017278 0.978883946 0.026681472 CG9467 FBtr0082156 9797767 9798459 3R - 9798202 9798300 3'utr CG9467 FlyBase G49683.1 ACTGGGCCGTGATGAACTGCCAGCAGGCATTTACCCAATCAATTAATCTCCATTATATGTGCTCGATGTGTTTGCAAATGCAATGTGTATCCCGTAAAC 25 9798243 0.980188227 11 25 207 1 1.447158031 0.107142857 0.12 0.214285714 25 0 0 28 3R:9798202-9798300 6 CG9467 FBtr0082156 9797767 9798459 ATGTGC 6mer3-8 dme-miR-305-3p 3R - 9798151 9798301 3'utr CG9467 FlyBase G37564.1 CACTGGGCCGTGATGAACTGCCAGCAGGCATTTACCCAATCAATTAATCTCCATTATATGTGCTCGATGTGTTTGCAAATGCAATGTGTATCCCGTAAACCCATTTTTTGTGCTCCTCCAAACTTGGATCGTACAGTTAGTAATTTAAAAA 32 9798243 0.990393691 14 23 224 0.673469388 1.041392685 0.040816327 0.375 0.591836735 32 14 2 33 3R:9798151-9798301 6 14.5 2996 FBgn0037758 388.19 14.69 22.38 0.037352843 0.987066031 0.647899911 -1 -1 -1 0.2 dme-miR-980-3p 6mer3-8 GGCAGC 3R 9804268 9804273 - 3R_9804268_9804273_- 0.843099865 0.933159538 0.888129701 0.063681754 FBXO11 FBtr0334684 9803484 9804888 3R - 9804260 9804338 3'utr FBXO11 FlyBase G49702.1 CCCCCTCCTGACTAACAACAATTCGAAGAAAGCAATTCTAAGTATTAACAACAAACTAGATTAGCGGCAGCCAATGCTT 15 9804302 0.966433388 7 13 69 0.875 0.84509804 0.0625 0.066666667 0.125 15 1 1 14 3R:9804260-9804338 6 FBXO11 FBtr0334684 9803484 9804888 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 9804254 9804315 3'utr FBXO11 FlyBase G37573.1 CGAAGAAAGCAATTCTAAGTATTAACAACAAACTAGATTAGCGGCAGCCAATGCTTCAGCAA 7 9804277 0.978236431 5 5 27 0.833333333 1 0 0.571428571 0.75 7 2 0 10 3R:9804254-9804315 6 6.5 2997 FBgn0037760 1562.243333 36.55333333 56.13333333 0.004160683 0.17782236 0.115795724 29 4 16.5 0.2 dme-miR-33-5p 8mer-A1 CAATGCAA 3R 9804607 9804614 - 3R_9804607_9804614_- 0.604524738 0.601048302 0.60278652 0.002458186 FBXO11 FBtr0334684 9803484 9804888 3R - 9804579 9804638 3'utr FBXO11 FlyBase G49705.1 TAACTGAGTATGTTACGGATAAATCAATGCAAAAACCACTGAAACTTTTCCCATTTATGT 80 9804615 0.791856305 4 78 257 0.980392157 2 0.274509804 0.2375 0.401960784 80 2 0 100 3R:9804579-9804638 8 FBXO11 FBtr0334684 9803484 9804888 CAATGCAA 8mer-A1 dme-miR-33-5p 3R - 9804601 9804633 3'utr FBXO11 FlyBase G37575.1 GAGTATGTTACGGATAAATCAATGCAAAAACCA 57 9804615 0.769030334 2 53 154 0.964285714 1.908485019 0.321428571 0.385964912 0.583333333 57 3 0 81 3R:9804601-9804633 8 66 2998 FBgn0037760 1562.243333 36.55333333 56.13333333 0.04224694 1.805580886 1.175771971 1 1 1 0.2 dme-miR-980-3p 8mer-A1 GGCAGCTA 3R 9804869 9804876 - 3R_9804869_9804876_- 0.598092627 0.667088892 0.63259076 0.048787752 FBXO11 FBtr0334684 9803484 9804888 3R - 9804788 9804910 stop_codon FBXO11 FlyBase G49707.1 ACACACACTGATGGTCAACTAGAGAACCCCCAACGGCAGCTAATCCACTATAGATATATCTTAAGTCGTTAAGGCCAATCTCTCAAATCTCTCGCACATCTCACGCGTTGCTGTAAATATTCA 43 9804868 0.768361185 17 38 185 0.901960784 1.361727836 0.215686275 0.162790698 0.294117647 43 4 1 46 3R:9804788-9804910 8 FBXO11 FBtr0334684 9803484 9804888 GGCAGCTA 8mer-A1 dme-miR-980-3p 3R - 9804788 9805011 stop_codon FBXO11 FlyBase G37577.1 TGCGACTGCGGTGCTGGCACCCTGTCCAATCAGTGTCAACTGCAGGGCGAACCCACTCAGGACACGGACACACTCTACGACTCGGCAGCCCCCATGGAATCACACACACTGATGGTCAACTAGAGAACCCCCAACGGCAGCTAATCCACTATAGATATATCTTAAGTCGTTAAGGCCAATCTCTCAAATCTCTCGCACATCTCACGCGTTGCTGTAAATATTCA 37 9804867 0.957714453 19 30 146 0.771929825 1.643452676 0.298245614 0.459459459 0.649122807 37 13 0 44 3R:9804788-9805011 8 18 2999 FBgn0037760 1562.243333 36.55333333 56.13333333 0.011521893 0.492431151 0.320665083 -8 -9 -8.5 0.2 dme-miR-283-5p 7mer-m1 GATATTT 3R 9983484 9983490 - 3R_9983484_9983490_- 0.719875255 0.489125177 0.604500216 0.16316496 Art4 FBtr0082150|FBtr0333687 9983184|9982814 9983912|9983912 3R - 9983395 9983507 3'utr Art4 FlyBase G49732.1 ATGTGAATTGTAATACCGATATTTAGCCCGCACGGGACTGCGCTTCAGGAAGTTTATTAGTTAATATGCCGATTGCCAATTGCAGATTTTGCCGTAAGCTTTGAACAAACCAA 14 9983497 0.981348367 10 12 88 0.894736842 1.230448921 0.210526316 0.285714286 0.473684211 14 2 0 17 3R:9983395-9983507 7 Art4 FBtr0082150|FBtr0333687 9983184|9982814 9983912|9983912 GATATTT 7mer-m1 dme-miR-283-5p 3R - 9983454 9983513 3'utr Art4 FlyBase G37592.1 TAACGTATGTGAATTGTAATACCGATATTTAGCCCGCACGGGACTGCGCTTCAGGAAGTT 9 9983498 0.975851168 7 9 53 1 1.079181246 0.416666667 0.222222222 0.416666667 9 0 0 12 3R:9983454-9983513 7 5 3000 FBgn0037770 662.43 26.1 40.01666667 0.007547967 0.191570881 0.124947938 7 8 7.5 0.2 dme-miR-304-5p 7mer-m8 TGAGATT 3R 9990038 9990044 + 3R_9990038_9990044_+ 0.481886411 0.443409988 0.462648199 0.027206923 Glut4EF FBtr0333686|FBtr0305157 9987787|9987787 9995364|9995364 3R + 9990016 9990060 3'utr Glut4EF FlyBase G41663.1 CCATCTAGGGATAGCTACGCATTGAGATTGAAGAGCAGGAGAATT 52 9990037 0.768017113 5 52 248 1 1.806179974 0.34375 0.211538462 0.359375 52 0 0 64 3R:9990016-9990060 7 Glut4EF FBtr0333686|FBtr0305157 9987787|9987787 9995364|9995364 TGAGATT 7mer-m8 dme-miR-304-5p 3R + 9990017 9990126 3'utr Glut4EF FlyBase G31445.1 CATCTAGGGATAGCTACGCATTGAGATTGAAGAGCAGGAGAATTTACGAATGAAGAAATGAAAATACACAAGGAATTCTTAACCAAATTGGAAGTACAAACTAAAGTCTA 56 9990037 0.958686242 8 54 262 0.954545455 1.924279286 0.397727273 0.392857143 0.613636364 56 4 0 84 3R:9990017-9990126 7 42 3001 FBgn0267336 810.6266667 20.61 31.68 0.051811767 2.037845706 1.325757576 1 1 1 0.2 dme-miR-1007-3p 8mer-A1 TGAGCTTA 3R 9990258 9990265 + 3R_9990258_9990265_+ 0.612331988 0.578527098 0.595429543 0.023903674 Glut4EF FBtr0333686|FBtr0305157 9987787|9987787 9995364|9995364 3R + 9990238 9990285 3'utr Glut4EF FlyBase G41665.1 AGGAGGAGCGGAGGGAAAATTGAGCTTAGGCGGCAGCAGCTTTAAAAA 11 9990257 0.918249382 4 11 37 1 1.041392685 0.272727273 0 0 11 0 0 11 3R:9990238-9990285 8 Glut4EF FBtr0333686|FBtr0305157 9987787|9987787 9995364|9995364 TGAGCTTA 8mer-A1 dme-miR-1007-3p 3R + 9990241 9990282 3'utr Glut4EF FlyBase G31446.1 AGGAGCGGAGGGAAAATTGAGCTTAGGCGGCAGCAGCTTTAA 7 9990257 0.922158899 4 7 21 1 1.079181246 0.416666667 0.571428571 0.75 7 0 0 12 3R:9990241-9990282 8 9 3002 FBgn0267336 810.6266667 20.61 31.68 0.011102522 0.436681223 0.284090909 1 1 1 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 4 1034707 1034712 + 4_1034707_1034712_+ 0.980319069 0.982146039 0.981232554 0.001291813 ATPsyn-beta FBtr0344754 1034412 1034917 4 + 1034691 1034731 3'utr ATPsyn-beta FlyBase G56605.1 ACACTATGTTATCATTTTGACTGACTGTCGAAAATAAACCA 17 1034706 0.666028667 8 16 152 1 1.301029996 0.15 0.176470588 0.3 17 0 0 20 4:1034691-1034731 6 ATPsyn-beta FBtr0344754 1034412 1034917 TTGACT 6mer3-8 dme-miR-1012-3p 4 + 1034678 1034723 3'utr ATPsyn-beta FlyBase G42754.1 TATATTAAAAATTACACTATGTTATCATTTTGACTGACTGTCGAAA 14 1034707 0.987529492 5 14 129 1 1.230448921 0.411764706 0.214285714 0.352941176 14 0 0 17 4:1034678-1034723 6 15 3003 FBgn0010217 4002.656667 288.0533333 441.7933333 0.003747511 0.05207369 0.033952527 1 0 0.5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 4 1035750 1035756 - 4_1035750_1035756_- 0.821926602 0.822217569 0.822072086 0.000205768 CaMKII FBtr0333673|FBtr0300378|FBtr0333674|FBtr0089218|FBtr0333675|FBtr0089219|FBtr0089217|FBtr0100146|FBtr0100148|FBtr0100147 1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286 1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277 4 - 1035744 1035786 3'utr CaMKII FlyBase G57302.1 ACTTAATCATTGTGAAATGATTATACATTTTACCTGATAGTAC 8 1035758 0.756657061 3 7 90 0.888888889 0.602059991 0 0.125 0.222222222 8 0 1 8 4:1035744-1035786 7 CaMKII FBtr0089217|FBtr0100146|FBtr0100148|FBtr0100147|FBtr0333675|FBtr0089219|FBtr0333674|FBtr0089218|FBtr0333673|FBtr0300378 1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286 1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 4 - 1035715 1035774 3'utr CaMKII FlyBase G43304.1 TGAAATGATTATACATTTTACCTGATAGTACATGTTAAAAAAAAACTTGGACTTAAACAC 11 1035758 0.858366592 4 10 74 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 4:1035715-1035774 7 6.5 3004 FBgn0264607 1116.67 52.21333333 80.09666667 0.005820878 0.124489275 0.081151941 2 2 2 0.2 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 4 108111 108118 + 4_108111_108118_+ 0.617304469 0.61757639 0.617440429 0.000192262 pan FBtr0308615 104412 110059 4 + 108033 108174 3'utr pan FlyBase G56193.1 TCCTATATTTGCATTGCCATCAATTGGTAATTGTAGTTTAAATATTTCTTCAATGCCAAACACATCCCGAAACCCTATTGGTGCTAACCCACGAGATATTAATAATCCCCTTAGCATCAATCAGCTGACTAAAAGACGTGAA 79 108110 0.957714487 11 78 379 0.989247312 1.963787827 0.086021505 0.151898734 0.279569892 79 1 0 92 4:108033-108174 8 pan FBtr0308615 104412 110059 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 4 + 108090 108131 3'utr pan FlyBase G42420.1 AAACACATCCCGAAACCCTATTGGTGCTAACCCACGAGATAT 33 108110 0.920295414 2 32 140 0.961538462 1.698970004 0.076923077 0.454545455 0.653846154 33 2 0 50 4:108090-108131 8 47.5 3005 FBgn0085432 3045.83 84.67333333 129.51 0.015595092 0.56097945 0.366767045 1 1 1 0.2 dme-miR-277-3p 7mer-m8 TGCATTT 4 108825 108831 + 4_108825_108831_+ 0.546662453 0.539147685 0.542905069 0.005313766 pan FBtr0309803|FBtr0100245|FBtr0308615|FBtr0089162|FBtr0112657|FBtr0089161 108491|108491|104412|108491|108491|108491 114270|109770|110059|110059|110059|110059 4 + 108736 108853 3'utr pan FlyBase G56197.2 AAAGAAACATGAGTCAAATCTCAGGCTAGGCCGTGCCAAATAGAATAAACAGACAATACACACTAAAACTTAGTTACATAAACATCTATTGCATTTGACACCTTATAAAATAATATTT 160 108824 0.994017517 10 156 1233 0.97382199 1.968482949 0.020942408 0.15 0.287958115 160 4 1 186 4:108736-108853 7 pan FBtr0089161|FBtr0089162|FBtr0112657|FBtr0308615|FBtr0309803|FBtr0100245 108491|108491|108491|104412|108491|108491 110059|110059|110059|110059|114270|109770 TGCATTT 7mer-m8 dme-miR-277-3p 4 + 108737 108856 3'utr pan FlyBase G42425.1 AAGAAACATGAGTCAAATCTCAGGCTAGGCCGTGCCAAATAGAATAAACAGACAATACACACTAAAACTTAGTTACATAAACATCTATTGCATTTGACACCTTATAAAATAATATTTTCA 93 108824 0.976874429 8 88 677 0.939189189 2.1430148 0.054054054 0.430107527 0.641891892 93 9 0 139 4:108737-108856 7 108.5 3006 FBgn0085432 3045.83 84.67333333 129.51 0.035622474 1.281395166 0.837773145 1 1 1 0.2 dme-miR-31a-5p 7mer-A1 CTTGCCA 4 108935 108941 + 4_108935_108941_+ 0.82281804 0.82334774 0.82308289 0.000374554 pan FBtr0309803|FBtr0100245|FBtr0308615|FBtr0089162|FBtr0112657|FBtr0089161 108491|108491|104412|108491|108491|108491 114270|109770|110059|110059|110059|110059 4 + 108877 108953 3'utr pan FlyBase G56198.1 TCTATTTATTTAGCTTAACACAACCAAATTATGTATTTTATTTTAAAATTAGACACAACTTGCCAAAATCCATTAAT 14 108914 0.98663349 9 13 118 0.928571429 1.113943352 0 0 0 14 1 0 13 4:108877-108953 7 pan FBtr0089161|FBtr0089162|FBtr0112657|FBtr0308615|FBtr0309803|FBtr0100245 108491|108491|108491|104412|108491|108491 110059|110059|110059|110059|114270|109770 CTTGCCA 7mer-A1 dme-miR-31a-5p 4 + 108896 108947 3'utr pan FlyBase G42426.1 ACAACCAAATTATGTATTTTATTTTAAAATTAGACACAACTTGCCAAAATCC 7 108905 0.933265951 5 6 51 1 1 0 0.285714286 0.5 7 0 0 10 4:108896-108947 7 4 3007 FBgn0085432 3045.83 84.67333333 129.51 0.001313271 0.047240375 0.030885646 21 30 25.5 0.2 dme-miR-1006-3p 8mer-A1 CGAATTTA 4 109902 109909 + 4_109902_109909_+ 0.671640376 0.577635387 0.624637882 0.066471573 pan FBtr0309803|FBtr0308615|FBtr0089162|FBtr0112657|FBtr0089161 108491|104412|108491|108491|108491 114270|110059|110059|110059|110059 4 + 109828 109949 3'utr pan FlyBase G56204.1 ATATGTGTACGATATATATTATAAGCTAAATGTAAATATGTATTTTCTTATATAGAACGTACTGATAATCTTTACGAATTTATTGACCATAAGACCTGATAGCCTTTATTCCATGTAAAACG 197 109917 0.870164064 21 179 1457 0.903361345 1.55428721 0.071428571 0.172588832 0.31512605 197 18 5 215 4:109828-109949 8 pan FBtr0089161|FBtr0089162|FBtr0112657|FBtr0308615|FBtr0309803 108491|108491|108491|104412|108491 110059|110059|110059|110059|114270 CGAATTTA 8mer-A1 dme-miR-1006-3p 4 + 109850 109972 3'utr pan FlyBase G42433.1 AAGCTAAATGTAAATATGTATTTTCTTATATAGAACGTACTGATAATCTTTACGAATTTATTGACCATAAGACCTGATAGCCTTTATTCCATGTAAAACGTAAAATCCACATCTACAAACGAA 126 109927 0.982028755 19 117 869 0.922680412 2.252853031 0.113402062 0.404761905 0.613402062 126 15 0 179 4:109850-109972 8 52 3008 FBgn0085432 3045.83 84.67333333 129.51 0.017072522 0.614124872 0.401513397 -15 -25 -20 0.2 dme-miR-190-5p 8mer-m1 ACATATCT 4 110236 110243 + 4_110236_110243_+ 0.545219153 0.37575152 0.460485336 0.11983176 pan FBtr0309803 108491 114270 4 + 110164 110279 3'utr pan FlyBase G56206.1 TTGTTTTTAATGTGTTAGTTATTTAAAATGCTTTAGGTTTAATTATCTCATATGTACACCGGTACTTAATATACATATCTTGATTTTCCGGAATGACAATCCTGTATATCCTATAA 22 110234 0.988908584 11 19 192 0.892857143 1.397940009 0.214285714 0.181818182 0.357142857 22 3 0 25 4:110164-110279 8 pan FBtr0309803 108491 114270 ACATATCT 8mer-m1 dme-miR-190-5p 4 + 110176 110263 3'utr pan FlyBase G42436.1 TGTTAGTTATTTAAAATGCTTTAGGTTTAATTATCTCATATGTACACCGGTACTTAATATACATATCTTGATTTTCCGGAATGACAAT 32 110233 0.980541349 15 30 323 0.9375 1.653212514 0.104166667 0.375 0.583333333 32 3 0 45 4:110176-110263 8 11 3009 FBgn0085432 3045.83 84.67333333 129.51 0.003611495 0.129911031 0.084935526 2 3 2.5 0.2 dme-miR-970-3p 6mer3-8 TCTTAT 4 110630 110635 + 4_110630_110635_+ 0.97799069 0.745327456 0.861659073 0.164517726 pan FBtr0309803 108491 114270 4 + 110493 110807 3'utr pan FlyBase G56209.1 TTTCAATTGTAATGCCAATAAATTTTTAAAATATCATTCTTACCCTCTGGGTTGATTAACGTGTATCTAGTAGTGTAGAAAATCAACTTTACTATAGTAACTAAAATTTAAATGGTAAACAACTTTTAAAACGTATCTCTTATTTTACTTTATATTAGGAGTATTATAATTTTTAAATTGTATAGACACAAAATCTTCATTGACCGTGCTAAAGTAAAGACATAAATGCGAGCATAACTAAGCATTTTAATAACCTTATTTTAACTAAGATATTTACAGTATTGCCAAATGTTGTTGCGAATATATATATAAAAA 181 110632 0.987794173 36 176 1586 0.967741935 2.322219295 0.129032258 0.165745856 0.304147465 181 7 0 210 4:110493-110807 6 pan FBtr0309803 108491 114270 TCTTAT 6mer3-8 dme-miR-970-3p 4 + 110604 110664 3'utr pan FlyBase G42438.2 ATGGTAAACAACTTTTAAAACGTATCTCTTATTTTACTTTATATTAGGAGTATTATAATTT 43 110632 0.693535057 7 40 439 0.964285714 1.73239376 0.017857143 0.285714286 0.464285714 42 2 0 54 4:110604-110664 6 57.5 3010 FBgn0085432 3045.83 84.67333333 129.51 0.01887827 0.679080387 0.44398116 -2 -2 -2 0.2 dme-miR-252-5p 6mer3-8 GTACTT 4 1115157 1115162 - 4_1115157_1115162_- 0.946752951 0.999205975 0.972979463 0.037089872 Cals FBtr0345193|FBtr0089208 1112872|1115077 1115826|1115826 4 - 1115137 1115231 3'utr Cals FlyBase G57337.1 AACTTAGATTAAGGAACATATCGAAGCTATAAAAAATTTATTTTCAACCGACCATAAACTTGTGAAATTGTACTTTTAAAATAGAATTTTTAATT 23 1115163 0.966308239 9 23 130 1 1.462397998 0.068965517 0.173913043 0.344827586 23 0 0 29 4:1115137-1115231 6 Cals FBtr0345193|FBtr0089208 1112872|1115077 1115826|1115826 GTACTT 6mer3-8 dme-miR-252-5p 4 - 1115152 1115183 3'utr Cals FlyBase G43324.1 CGACCATAAACTTGTGAAATTGTACTTTTAAA 6 1115163 0.697687705 2 6 41 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 4:1115152-1115183 6 8.5 3011 FBgn0039928 3212.163333 100.7466667 154.9366667 0.002646192 0.084370037 0.054861126 1 1 1 0.2 dme-miR-184-3p 7mer-m8 TCCGTCC 4 1115354 1115360 - 4_1115354_1115360_- 0.661437115 0.661527302 0.661482209 6.38E-05 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 4 - 1115271 1115478 3'utr Cals FlyBase G57338.1 AAATATACACATAAGATCTATTTAATTTATAGTTTGTCAGCCCTCACCTTAAGATGTAAAATGCACATGTCTACCAAATTTCAACTGAATTCTGTCGCAATGCATAGGAGGAAGTTTCTCCGTCCCAATAATTTAAGCCTAATAATAAAACATAAAAAAAATTTGAAATGGATCGTAATACCCAAACAATGTTGACTTATTTAATAAA 253 1115361 0.983445027 36 232 1788 0.918644068 1.8309093 0.088135593 0.134387352 0.257627119 253 21 3 271 4:1115271-1115478 7 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 TCCGTCC 7mer-m8 dme-miR-184-3p 4 - 1115338 1115477 3'utr Cals FlyBase G43326.1 AATATACACATAAGATCTATTTAATTTATAGTTTGTCAGCCCTCACCTTAAGATGTAAAATGCACATGTCTACCAAATTTCAACTGAATTCTGTCGCAATGCATAGGAGGAAGTTTCTCCGTCCCAATAATTTAAGCCTA 119 1115361 0.82768637 25 108 801 0.926966292 2.217483944 0.078651685 0.361344538 0.573033708 119 13 0 165 4:1115338-1115477 7 68 3012 FBgn0039928 3212.163333 100.7466667 154.9366667 0.021169534 0.674960296 0.438889008 1 1 1 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 4 1115401 1115406 - 4_1115401_1115406_- 0.687034948 0.569087766 0.628061357 0.083401194 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 4 - 1115271 1115478 3'utr Cals FlyBase G57338.1 AAATATACACATAAGATCTATTTAATTTATAGTTTGTCAGCCCTCACCTTAAGATGTAAAATGCACATGTCTACCAAATTTCAACTGAATTCTGTCGCAATGCATAGGAGGAAGTTTCTCCGTCCCAATAATTTAAGCCTAATAATAAAACATAAAAAAAATTTGAAATGGATCGTAATACCCAAACAATGTTGACTTATTTAATAAA 253 1115399 0.983445027 36 232 1788 0.918644068 1.8309093 0.088135593 0.134387352 0.257627119 253 21 3 271 4:1115271-1115478 6 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 4 - 1115338 1115477 3'utr Cals FlyBase G43326.1 AATATACACATAAGATCTATTTAATTTATAGTTTGTCAGCCCTCACCTTAAGATGTAAAATGCACATGTCTACCAAATTTCAACTGAATTCTGTCGCAATGCATAGGAGGAAGTTTCTCCGTCCCAATAATTTAAGCCTA 119 1115399 0.82768637 25 108 801 0.926966292 2.217483944 0.078651685 0.361344538 0.573033708 119 13 0 165 4:1115338-1115477 6 70.5 3013 FBgn0039928 3212.163333 100.7466667 154.9366667 0.021947825 0.699775013 0.455024634 -7 -7 -7 0.2 dme-miR-305-5p 8mer-m1 AGTACAAT 4 1115532 1115539 - 4_1115532_1115539_- 0.570363039 0.570363043 0.570363041 0 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 4 - 1115501 1115556 3'utr Cals FlyBase G57339.1 AAATATAGCTAAGGTATAGTACAATTATTATGTAACCAGCGTCGCTAGATCCATAA 15 1115531 0.721025649 5 12 107 0.85 1.230448921 0.05 0.266666667 0.45 15 3 0 17 4:1115501-1115556 8 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 AGTACAAT 8mer-m1 dme-miR-305-5p 4 - 1115511 1115558 3'utr Cals FlyBase G43327.1 AAAAATATAGCTAAGGTATAGTACAATTATTATGTAACCAGCGTCGCT 11 1115531 0.724160438 7 8 75 0.769230769 1 0.076923077 0.181818182 0.307692308 11 3 0 10 4:1115511-1115558 8 8.5 3014 FBgn0039928 3212.163333 100.7466667 154.9366667 0.002646192 0.084370037 0.054861126 -8 -8 -8 0.2 dme-miR-276a-3p 6mer3-8 AGTTCC 4 1115721 1115726 - 4_1115721_1115726_- 0.879720946 0.858327764 0.869024355 0.015127206 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 4 - 1115654 1115736 3'utr Cals FlyBase G57340.2 GTTATAAATGAGTTCCAAAGAGTCTGCATATATGGCTGCAGGCATAATTGTAAAGACGTGCATTTATAGTTTTTTTTGCAACA 31 1115724 0.825079658 7 27 186 0.909090909 1.176091259 0.212121212 0.032258065 0.090909091 31 2 1 30 4:1115654-1115736 6 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 AGTTCC 6mer3-8 dme-miR-276a-3p 4 - 1115692 1115738 3'utr Cals FlyBase G43328.1 AAGTTATAAATGAGTTCCAAAGAGTCTGCATATATGGCTGCAGGCAT 11 1115724 0.975506843 2 10 60 0.923076923 1.079181246 0.153846154 0.181818182 0.307692308 11 1 0 12 4:1115692-1115738 6 12.5 3015 FBgn0039928 3212.163333 100.7466667 154.9366667 0.003891458 0.124073584 0.080678127 -2 -2 -2 0.2 dme-miR-932-5p 7mer-m8 GGAATTG 4 1125061 1125067 + 4_1125061_1125067_+ 0.702959746 0.70229962 0.702629683 0.000466761 Arf102F FBtr0089192 1125035 1125325 4 + 1125040 1125142 3'utr Arf102F FlyBase G56613.1 TATTCCTTATATTGTAAGATAGGAATTGCTGTTCTCGTATGCTGAAAACTAGATTTTAAATAAACTTGTAAATGTATATAAACTCGTTTGGAACTTTGTTGTA 43 1125079 0.867436297 14 40 362 0.9375 1.352182518 0.291666667 0.11627907 0.208333333 43 2 1 45 4:1125040-1125142 7 Arf102F FBtr0089192 1125035 1125325 GGAATTG 7mer-m8 dme-miR-932-5p 4 + 1125050 1125102 3'utr Arf102F FlyBase G42763.1 ATTGTAAGATAGGAATTGCTGTTCTCGTATGCTGAAAACTAGATTTTAAATAA 40 1125067 0.690812684 8 36 293 0.938461538 1.183269844 0.215384615 0.5 0.692307692 40 1 3 61 4:1125050-1125102 7 31 3016 FBgn0013749 854.0466667 143.2933333 218.6 0.036297782 0.216339444 0.141811528 -18 -6 -12 0.2 dme-miR-31a-5p 6mer2-7 CTTGCC 4 1125186 1125191 + 4_1125186_1125191_+ 0.767024486 0.980587947 0.873806217 0.151012128 Arf102F FBtr0089192 1125035 1125325 4 + 1125152 1125217 3'utr Arf102F FlyBase G56614.1 TGTCCACGTTTTATGTGTTGGTGAGAAAACTGCACTTGCCTTAGTTGTATTTTTAAAAATTAGTGA 12 1125191 0.987250927 4 12 119 1 1.176091259 0.2 0.25 0.4 12 0 0 15 4:1125152-1125217 6 Arf102F FBtr0089192 1125035 1125325 CTTGCC 6mer2-7 dme-miR-31a-5p 4 + 1125136 1125204 3'utr Arf102F FlyBase G42764.1 TGTTGTAAATTTAAAATGTCCACGTTTTATGTGTTGGTGAGAAAACTGCACTTGCCTTAGTTGTATTTT 13 1125192 0.981910858 7 12 92 1 1.230448921 0.352941176 0.307692308 0.470588235 13 0 0 17 4:1125136-1125204 6 9.5 3017 FBgn0013749 854.0466667 143.2933333 218.6 0.011123514 0.066297571 0.043458371 -5 -6 -5.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 4 112846 112853 + 4_112846_112853_+ 0.606119703 0.629944966 0.618032335 0.016847031 pan FBtr0309803|FBtr0309803|FBtr0309803 108491|108491|108491 114270|114270|114270 4 + 112824 112867 3'utr pan FlyBase G56212.1 TAGAAATTCAACAAATACACTGCTGTGATAAATCTAATTAACGA 28 112844 0.834744802 3 26 167 0.933333333 1.447158031 0 0.071428571 0.133333333 28 2 0 28 4:112824-112867 8 pan FBtr0309803|FBtr0309803|FBtr0309803 108491|108491|108491 114270|114270|114270 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 4 + 112812 112859 3'utr pan FlyBase G42442.1 TTACATCAAGTTTAGAAATTCAACAAATACACTGCTGTGATAAATCTA 17 112844 0.977483512 5 16 107 0.966666667 1.462397998 0 0.411764706 0.666666667 17 1 0 29 4:112812-112859 8 21.5 3018 FBgn0085432 3045.83 84.67333333 129.51 0.007058831 0.253917014 0.166010347 2 2 2 0.2 dme-miR-14-3p 7mer-m8 AAGACTG 4 113107 113113 + 4_113107_113113_+ 0.456135177 0.587348212 0.521741694 0.092781602 pan FBtr0309803 108491 114270 4 + 113087 113126 3'utr pan FlyBase G56213.1 AAAGGCCATTGCCAATTTAAAAGACTGTTTAACACAAATT 22 113115 0.662937892 6 21 153 0.931034483 1.431363764 0 0.318181818 0.482758621 22 2 0 27 4:113087-113126 7 pan FBtr0309803 108491 114270 AAGACTG 7mer-m8 dme-miR-14-3p 4 + 113088 113124 3'utr pan FlyBase G42443.1 AAGGCCATTGCCAATTTAAAAGACTGTTTAACACAAA 13 113114 0.653518928 4 12 96 0.875 1.322219295 0 0.461538462 0.708333333 13 3 0 21 4:113088-113124 7 17.5 3019 FBgn0085432 3045.83 84.67333333 129.51 0.00574556 0.20667664 0.135124701 -8 -7 -7.5 0.2 dme-miR-184-5p 6mer3-8 TGATAA 4 1223214 1223219 + 4_1223214_1223219_+ 0.878488063 0.86329888 0.870893471 0.010740386 Mitf FBtr0307327|FBtr0307328|FBtr0307326|FBtr0307329 1222790|1222790|1222790|1222790 1223450|1223450|1224467|1224467 4 + 1223101 1223254 5'utr Mitf FlyBase G56627.1 TGTGTCAACACTTACTTCCAAGAACTACATAGACACAAACAAAATATACCGATGAGAAAAAAAGAATATAAAGTTTGTAAGTTATTGTGGATTTTTTCATAAGATTTGTGATTTGATAAAAAAAACACGAAATAAGAATGGTCTAATATTATAT 53 1223213 0.982291435 15 52 386 0.985294118 1.826074803 0.029411765 0.245283019 0.411764706 53 1 0 67 4:1223101-1223254 6 Mitf FBtr0307327|FBtr0307328|FBtr0307326|FBtr0307329 1222790|1222790|1222790|1222790 1223450|1223450|1224467|1224467 TGATAA 6mer3-8 dme-miR-184-5p 4 + 1223105 1223257 5'utr Mitf FlyBase G42776.1 TCAACACTTACTTCCAAGAACTACATAGACACAAACAAAATATACCGATGAGAAAAAAAGAATATAAAGTTTGTAAGTTATTGTGGATTTTTTCATAAGATTTGTGATTTGATAAAAAAAACACGAAATAAGAATGGTCTAATATTATATATA 36 1223213 0.946059324 14 35 305 0.965517241 1.748188027 0 0.444444444 0.655172414 36 2 0 56 4:1223105-1223257 6 24 3020 FBgn0263112 1506.45 56.91333333 87.3 0.015931495 0.421693803 0.274914089 1 1 1 0.2 dme-miR-184-5p 6mer3-8 TGATAA 4 1223318 1223323 + 4_1223318_1223323_+ 0.524744395 0.588880004 0.556812199 0.045350718 Mitf FBtr0307327|FBtr0307328|FBtr0307326|FBtr0307329 1222790|1222790|1222790|1222790 1223450|1223450|1224467|1224467 4 + 1223263 1223352 5'utr Mitf FlyBase G56628.1 AATCTAAATCATCAGGTATAATTTCAGAGCGCCTTCCTTTTCAAATAAGGAGTTGTGATAATTGTGTATATTAACATTGACAAATGTTTT 59 1223315 0.936208323 14 56 486 0.943661972 1.826074803 0.098591549 0.186440678 0.323943662 59 4 0 67 4:1223263-1223352 6 Mitf FBtr0307327|FBtr0307328|FBtr0307326|FBtr0307329 1222790|1222790|1222790|1222790 1223450|1223450|1224467|1224467 TGATAA 6mer3-8 dme-miR-184-5p 4 + 1223269 1223346 5'utr Mitf FlyBase G42777.1 AATCATCAGGTATAATTTCAGAGCGCCTTCCTTTTCAAATAAGGAGTTGTGATAATTGTGTATATTAACATTGACAAA 45 1223324 0.734396296 13 43 351 0.938461538 1.086359831 0.276923077 0.377777778 0.569230769 45 0 4 61 4:1223269-1223346 6 29 3021 FBgn0263112 1506.45 56.91333333 87.3 0.019250556 0.509546679 0.332187858 3 -6 -1.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 4 1223688 1223694 + 4_1223688_1223694_+ 0.750136904 0.733473661 0.741805282 0.011782662 Mitf FBtr0307326|FBtr0307326|FBtr0307326|FBtr0307329|FBtr0307329|FBtr0307329 1222790|1222790|1222790|1222790|1222790|1222790 1224467|1224467|1224467|1224467|1224467|1224467 4 + 1223622 1223708 3'utr Mitf FlyBase G56629.1 ATGATTCGTTAAAGTTGTCCGATCTTCATGAGTGCTACAGCATTGAAAATGTAGTCCAAAAACTAATGTGATAATATAATAAGAACT 33 1223685 0.863521711 12 30 222 0.95 1.579783597 0.25 0.212121212 0.35 33 2 0 38 4:1223622-1223708 7 Mitf FBtr0307326|FBtr0307326|FBtr0307326|FBtr0307329|FBtr0307329|FBtr0307329 1222790|1222790|1222790|1222790|1222790|1222790 1224467|1224467|1224467|1224467|1224467|1224467 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 4 + 1223629 1223711 3'utr Mitf FlyBase G42779.1 GTTAAAGTTGTCCGATCTTCATGAGTGCTACAGCATTGAAAATGTAGTCCAAAAACTAATGTGATAATATAATAAGAACTTAA 23 1223686 0.971937342 7 22 149 0.971428571 1.230448921 0.085714286 0.391304348 0.6 23 0 1 34 4:1223629-1223711 7 15.5 3022 FBgn0263112 1506.45 56.91333333 87.3 0.01028909 0.272343915 0.177548683 3 2 2.5 0.2 dme-bantam-3p 6mer3-8 TGATCT 4 1225679 1225684 - 4_1225679_1225684_- 0.999434094 0.961719883 0.980576988 0.026667967 Dyrk3 FBtr0100406 1225087 1226157 4 - 1225672 1225732 3'utr Dyrk3 FlyBase G57397.1 ATCGAATGTGTACATTATTTATTTAATAATTCCGAATTTTTAAAACAGTGATCTTTGCCAA 9 1225682 0.990629088 6 8 76 0.916666667 0.740362689 0 0.333333333 0.5 9 0 1 11 4:1225672-1225732 6 Dyrk3 FBtr0100406 1225087 1226157 TGATCT 6mer3-8 dme-bantam-3p 4 - 1225665 1225694 3'utr Dyrk3 FlyBase G43373.1 TTTAAAACAGTGATCTTTGCCAATTTTTTT 8 1225680 0.625997628 3 7 57 0.916666667 1.041392685 0 0.25 0.5 8 1 0 11 4:1225665-1225694 6 7.5 3023 FBgn0027101 1644.923333 56.32666667 86.10666667 0.004559483 0.133151852 0.08710127 -2 -4 -3 0.2 dme-miR-276a-3p 8mer-A1 AGTTCCTA 4 142899 142906 + 4_142899_142906_+ 0.637833356 0.635527401 0.636680379 0.001630588 CG32000 FBtr0089451|FBtr0089448|FBtr0089449|FBtr0333161|FBtr0113417 142794|142794|142794|142794|142794 143123|143123|143123|143123|143123 4 + 142850 143089 3'utr CG32000 FlyBase G56253.1 TTAGGAATTTCCATTATTAATACAGTAGAAAATGTAGGCAAAATTATTTAGTTCCTATTTAGTTTTTTTAGTAATCTTAGTATTTCTAATTGTACTTACATCAAAGATAACTTTGTATTAGCTATGAACACTTTTGTCTTTCTATGTTTAAAACGGCGTTGTTTCTTGATTATAATTAAGTGTTTGATGTTTATATACATAAGCAAAAATTCATATAGGCTGTATAATAAGCATTGGAGT 206 142897 0.934845437 41 188 2096 0.92519685 1.893946608 0.165354331 0.175609756 0.334645669 205 17 2 235 4:142850-143089 8 CG32000 FBtr0089451|FBtr0113417|FBtr0333161|FBtr0089449|FBtr0089448 142794|142794|142794|142794|142794 143123|143123|143123|143123|143123 AGTTCCTA 8mer-A1 dme-miR-276a-3p 4 + 142845 143032 3'utr CG32000 FlyBase G42466.1 TACTTTTAGGAATTTCCATTATTAATACAGTAGAAAATGTAGGCAAAATTATTTAGTTCCTATTTAGTTTTTTTAGTAATCTTAGTATTTCTAATTGTACTTACATCAAAGATAACTTTGTATTAGCTATGAACACTTTTGTCTTTCTATGTTTAAAACGGCGTTGTTTCTTGATTATAATTAAGTGT 105 142897 0.992228598 31 98 1136 0.944099379 2.181843588 0.198757764 0.40952381 0.614906832 105 9 0 152 4:142845-143032 8 41.5 3024 FBgn0052000 5598.68 138.82 213.5633333 0.007412462 0.298948278 0.194321747 2 2 2 0.2 dme-miR-999-3p 6mer3-8 AGTTAA 4 196970 196975 - 4_196970_196975_- 0.788416874 0.73615842 0.762287647 0.03695234 CG31998 FBtr0308249 196673 197877 4 - 196912 197077 3'utr CG31998 FlyBase G56757.2 GCTTATAAAAATAAAAAAATTCTTAAGACTACAACAACCTAAATTCGTTTAATATAAGTTAAAAGCCTGTTACAATTAAACGTTAATTACATAGTACTGATTAGTTAAGGGTATTGCATTTTCTATTGTTAAATCTTCCAAAATATACGGATCCTTATTAATAATT 400 196964 0.869040397 36 373 3310 0.942184154 1.865301426 0.143468951 0.1475 0.269807281 400 22 5 440 4:196912-197077 6 CG31998 FBtr0308249 196673 197877 AGTTAA 6mer3-8 dme-miR-999-3p 4 - 196892 197071 3'utr CG31998 FlyBase G42876.1 AAAAATAAAAAAATTCTTAAGACTACAACAACCTAAATTCGTTTAATATAAGTTAAAAGCCTGTTACAATTAAACGTTAATTACATAGTACTGATTAGTTAAGGGTATTGCATTTTCTATTGTTAAATCTTCCAAAATATACGGATCCTTATTAATAATTATATTTAGGTGTTCAATTGT 276 197005 0.986992216 33 258 2251 0.935866983 2.118374967 0.173396675 0.376811594 0.591448931 276 25 2 394 4:196892-197071 6 151.5 3025 FBgn0051998 3188.316667 75.81333333 116.5333333 0.047517237 1.99832923 1.300057208 -11 30 9.5 0.2 dme-miR-184-5p 6mer2-7 GATAAG 4 197149 197154 - 4_197149_197154_- 0.978119468 0.98358777 0.980853619 0.003866672 CG31998 FBtr0308249 196673 197877 4 - 197137 197191 3'utr CG31998 FlyBase G56758.1 TTTAAAGTTCATAAAAGAAATATTGGTTTTCATGTAAGATAAGTATTTTAAAAAG 14 197159 0.988962131 6 12 117 0.941176471 0.903089987 0.176470588 0.214285714 0.352941176 14 0 1 16 4:197137-197191 6 CG31998 FBtr0308249 196673 197877 GATAAG 6mer2-7 dme-miR-184-5p 4 - 197131 197169 3'utr CG31998 FlyBase G42878.1 TTGGTTTTCATGTAAGATAAGTATTTTAAAAAGGCCGTA 8 197159 0.977043385 2 8 71 1 1 0.2 0.25 0.4 8 0 0 10 4:197131-197169 6 9.5 3026 FBgn0051998 3188.316667 75.81333333 116.5333333 0.002979629 0.125307773 0.081521739 5 5 5 0.2 dme-miR-184-5p 7mer-A1 GATAAGA 4 212845 212851 + 4_212845_212851_+ 0.615882178 0.429847435 0.522864807 0.131546469 Crk FBtr0304871|FBtr0345065|FBtr0345064 212179|211892|212726 213165|213165|213165 4 + 212792 212878 3'utr Crk FlyBase G56261.1 GAAAACTACCTGCATACGCCCGCGTAAAACAGTCAAGGGTCCCTAACGCATACGATAAGACTGCATTAAAATTGGAAATAGGTGACA 126 212847 0.919134827 9 108 609 0.873417722 1.838849091 0.03164557 0.222222222 0.379746835 126 19 1 138 4:212792-212878 7 Crk FBtr0304871|FBtr0345065|FBtr0345064 212179|211892|212726 213165|213165|213165 GATAAGA 7mer-A1 dme-miR-184-5p 4 + 212827 212867 3'utr Crk FlyBase G42475.1 AGGGTCCCTAACGCATACGATAAGACTGCATTAAAATTGGA 68 212847 0.775801572 6 58 303 0.846153846 1.467361417 0 0.352941176 0.576923077 68 14 2 88 4:212827-212867 7 90 3027 FBgn0024811 1520.34 187.5933333 288.2066667 0.059197285 0.479761186 0.312275913 -2 -2 -2 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 4 212980 212986 + 4_212980_212986_+ 0.520812811 0.515394591 0.518103701 0.003831246 Crk FBtr0304871|FBtr0345065|FBtr0345064 212179|211892|212726 213165|213165|213165 4 + 212892 213006 3'utr Crk FlyBase G56262.1 TAAAACAAACATTAATGGGCAATGGGAGGGAGAATTAAATGGAAAAAATGGTCATTTTCCCTTCACGCACGTTGAATTTGTCGATGATTGTGATTTAAGCAAAAACTCCACAGAA 117 212980 0.952349745 11 109 972 0.944827586 1.291622527 0.379310345 0.179487179 0.337931034 117 2 6 137 4:212892-213006 7 Crk FBtr0304871|FBtr0345065|FBtr0345064 212179|211892|212726 213165|213165|213165 TGTGATT 7mer-m1 dme-miR-308-3p 4 + 212938 213102 stop_codon Crk FlyBase G42477.1 AATGGTCATTTTCCCTTCACGCACGTTGAATTTGTCGATGATTGTGATTTAAGCAAAAACTCCACAGAAATATGCTAAATAGGAAGGAATGGAAGGAATTTCTTTTGATAATTTTGATTTTTGAGCTAATTGTATGATTAATAAGTTGTGCATACCAATTGTTAA 86 212986 0.986669183 16 85 727 0.992248062 2.10720997 0.310077519 0.360465116 0.573643411 86 1 0 128 4:212938-213102 7 86.5 3028 FBgn0024811 1520.34 187.5933333 288.2066667 0.056895168 0.461103806 0.30013185 0 -6 -3 0.2 dme-miR-308-3p 7mer-m1 TGTGATT 4 241000 241006 + 4_241000_241006_+ 0.435363119 0.43589883 0.435630974 0.000378797 CG1674 FBtr0089119 240876 241318 4 + 240910 241026 5'utr CG1674 FlyBase G56268.1 ACACTGATTGCAACTTTTAGTACAGTGGTCAAGAAAAATCTCATTAGTCTAACTCTCCACTATAACAGGGATACCCCGTTTCCCATTGTATGTGATTTTTGTTAAAAATTTAAGTTT 46 240996 0.992683486 13 43 501 0.924528302 1.389166084 0.20754717 0.152173913 0.264150943 46 3 1 49 4:240910-241026 7 CG1674 FBtr0089119 240876 241318 TGTGATT 7mer-m1 dme-miR-308-3p 4 + 240974 241015 5'utr CG1674 FlyBase G42483.1 ACAGGGATACCCCGTTTCCCATTGTATGTGATTTTTGTTAAA 25 240996 0.786598585 4 22 313 0.794117647 1.431363764 0.205882353 0.32 0.5 25 7 0 27 4:240974-241015 7 27.5 3029 FBgn0039897 839.9 47.17666667 72.43333333 0.032741993 0.582915283 0.379659457 4 4 4 0.2 dme-bantam-3p 8mer-A1 TGATCTCA 4 280187 280194 - 4_280187_280194_- 0.580230933 0.62288761 0.601559272 0.030162842 Syt7 FBtr0089134 278683 280425 4 - 280152 280210 3'utr Syt7 FlyBase G56793.1 AAACATTGGCAGGACATGATCTCAAAGCCCAGACAAACTGTAGTACAATGGCATCGCTT 6 280194 0.899832612 3 6 26 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 4:280152-280210 8 Syt7 FBtr0089134 278683 280425 TGATCTCA 8mer-A1 dme-bantam-3p 4 - 280151 280210 3'utr Syt7 FlyBase G42902.1 AAACATTGGCAGGACATGATCTCAAAGCCCAGACAAACTGTAGTACAATGGCATCGCTTA 9 280194 0.942961179 4 9 40 1 1.041392685 0 0.111111111 0.272727273 9 0 0 11 4:280151-280210 8 5.5 3030 FBgn0039900 11 0.483333333 0.74 0.5 11.37931034 7.432432432 0 0 0 0.2 dme-miR-252-5p 6mer3-8 GTACTT 4 310320 310325 + 4_310320_310325_+ 0.999652272 0.999789762 0.999721017 9.72E-05 Rad23 FBtr0333679 310188 310822 4 + 310206 310340 3'utr Rad23 FlyBase G56282.1 AAGTTATGCAAATAACACCGGAAGCGTTACATTTAAAGTTAGATGTTCTTAAATTAAATGTAAAATGTCGATCATAAAAATTCTTTTATATTCTTTTAATACCGTCGGCGTATTGTACTTGTTATTTGTTAAAAA 38 310319 0.988544205 14 38 337 1 1.662757832 0.130434783 0.131578947 0.282608696 38 0 0 46 4:310206-310340 6 Rad23 FBtr0333679 310188 310822 GTACTT 6mer3-8 dme-miR-252-5p 4 + 310301 310341 3'utr Rad23 FlyBase G42496.1 TTAATACCGTCGGCGTATTGTACTTGTTATTTGTTAAAAAT 15 310319 0.735361194 6 12 167 0.866666667 0.937852093 0.033333333 0.733333333 0.866666667 15 2 2 26 4:310301-310341 6 19.5 3031 FBgn0026777 1534.613333 122.59 187.9666667 0.012706784 0.159066808 0.103741798 1 1 1 0.2 dme-miR-7-5p 6mer3-8 GTCTTC 4 310403 310408 + 4_310403_310408_+ 0.98847993 0.998325778 0.993402854 0.006962103 Rad23 FBtr0333679 310188 310822 4 + 310361 310454 3'utr Rad23 FlyBase G56283.1 GAGTTACGATGTCATTTTTACTAAATATTTCACCACGACATTGTCTTCAGCATAAGACTGCAAATGTCTACAAATTTATCTGTGCCAATCCATG 43 310401 0.978924784 10 43 294 1 1.69019608 0.020408163 0.139534884 0.244897959 43 0 0 49 4:310361-310454 6 Rad23 FBtr0333679 310188 310822 GTCTTC 6mer3-8 dme-miR-7-5p 4 + 310360 310429 3'utr Rad23 FlyBase G42497.1 AGAGTTACGATGTCATTTTTACTAAATATTTCACCACGACATTGTCTTCAGCATAAGACTGCAAATGTCT 40 310401 0.977940811 6 37 248 0.929824561 1.423245874 0.210526316 0.325 0.526315789 40 3 1 53 4:310360-310429 6 38 3032 FBgn0026777 1534.613333 122.59 187.9666667 0.024761938 0.309976344 0.202163504 2 2 2 0.2 dme-miR-304-5p 6mer2-7 GAGATT 4 311138 311143 - 4_311138_311143_- 0.999999851 0.999999475 0.999999663 2.83E-07 Zip102B FBtr0089133|FBtr0340652|FBtr0340653|FBtr0333681 310928|310928|310928|310928 312789|312789|312789|312789 4 - 311063 311237 3'utr Zip102B FlyBase G56795.1 TAATTCTTGTGTCTTTGAATCTACATTGAGTCAGGAAAGATTTATAATTGTAGCAACATTATAGAGGGGACCATAGCCATACATGAAACTATTAGAGATTTATTAATATTAAAGTGTAGAATTCTTTGCATTAATAATGCATATTACAATGTTCGAGTTTTATATTTGTCGTATT 29 311157 0.989731084 11 23 231 0.84375 1.130333768 0.15625 0.103448276 0.1875 29 4 1 27 4:311063-311237 6 Zip102B FBtr0333681|FBtr0340653|FBtr0340652|FBtr0089133 310928|310928|310928|310928 312789|312789|312789|312789 GAGATT 6mer2-7 dme-miR-304-5p 4 - 311110 311180 3'utr Zip102B FlyBase G42903.1 ATTATAGAGGGGACCATAGCCATACATGAAACTATTAGAGATTTATTAATATTAAAGTGTAGAATTCTTTG 12 311153 0.980001397 8 11 84 0.8125 1.113943352 0.125 0.25 0.4375 12 3 0 13 4:311110-311180 6 9 3033 FBgn0039902 844.14 35.44333333 54.17 0.010661739 0.253926455 0.166143622 14 10 12 0.2 dme-bantam-3p 7mer-m8 TGATCTC 4 311832 311838 - 4_311832_311838_- 0.661009776 0.661140988 0.661075382 9.28E-05 Zip102B FBtr0089133|FBtr0340652|FBtr0340653|FBtr0333681 310928|310928|310928|310928 312789|312789|312789|312789 4 - 311805 311917 3'utr Zip102B FlyBase G56799.2 GTTTTTGACTATGACGAGTCTGCTGGCGAAATTCGGCGCCGACTTGCGTACTATTCCTTTTCGTTGCCATTCCGAAACCTGATCTCGATTCTCTTCTCCTTGGGCACAATCGA 142 311838 0.854386643 19 128 1086 0.890243902 1.01822482 0.164634146 0.11971831 0.237804878 142 5 13 146 4:311805-311917 7 Zip102B FBtr0333681|FBtr0340653|FBtr0340652|FBtr0089133 310928|310928|310928|310928 312789|312789|312789|312789 TGATCTC 7mer-m8 dme-bantam-3p 4 - 311809 311902 3'utr Zip102B FlyBase G42906.1 GAGTCTGCTGGCGAAATTCGGCGCCGACTTGCGTACTATTCCTTTTCGTTGCCATTCCGAAACCTGATCTCGATTCTCTTCTCCTTGGGCACAA 92 311838 0.98512193 12 85 691 0.907142857 1.404833717 0.114285714 0.391304348 0.6 92 9 4 127 4:311809-311902 7 107.5 3034 FBgn0039902 844.14 35.44333333 54.17 0.127348544 3.033010439 1.984493262 0 0 0 0.2 dme-miR-1006-3p 7mer-A1 GAATTTA 4 312652 312658 - 4_312652_312658_- 0.82331402 0.81828871 0.820801365 0.003553424 Zip102B FBtr0089133|FBtr0340652|FBtr0340653|FBtr0333681 310928|310928|310928|310928 312789|312789|312789|312789 4 - 312643 312758 3'utr Zip102B FlyBase G56804.1 AAGATGAAGTAAAAGTTAAGGGATATTAAGCTATAAATATATTGGGTTTAATTTCTCGGATATACAATTATTAACATTAAGTGCTTTGCACAAAGATTTTGAATTTAATGAATTGT 21 312660 0.855593012 12 20 169 0.965517241 1.146128036 0.172413793 0.285714286 0.482758621 21 0 1 28 4:312643-312758 7 Zip102B FBtr0333681|FBtr0340653|FBtr0340652|FBtr0089133 310928|310928|310928|310928 312789|312789|312789|312789 GAATTTA 7mer-A1 dme-miR-1006-3p 4 - 312632 312695 3'utr Zip102B FlyBase G42909.1 ACAATTATTAACATTAAGTGCTTTGCACAAAGATTTTGAATTTAATGAATTGTCGCATGAAAGT 16 312660 0.988502865 8 15 133 0.954545455 1.322219295 0.090909091 0.3125 0.5 16 1 0 21 4:312632-312695 7 10 3035 FBgn0039902 844.14 35.44333333 54.17 0.011846376 0.282140506 0.184604024 2 2 2 0.2 dme-miR-1008-3p 8mer-A1 AGCTGTGA 4 329071 329078 - 4_329071_329078_- 0.606326083 0.632607348 0.619466715 0.018583615 PMCA FBtr0304046|FBtr0304049|FBtr0300555|FBtr0300554|FBtr0304047|FBtr0300557|FBtr0300556|FBtr0304048 328814|328814|328814|328814|328814|328814|328814|328191 329206|329206|331564|329206|329206|329206|329206|329206 4 - 329056 329094 3'utr PMCA FlyBase G56818.1 AGGATAACAGCAATGTAGCTGTGAATTGGTTAAAAAGCA 11 329080 0.762025845 4 10 69 1 1.176091259 0.2 0.272727273 0.466666667 11 0 0 15 4:329056-329094 8 PMCA FBtr0304047|FBtr0300554|FBtr0300556|FBtr0300557|FBtr0304048|FBtr0304046|FBtr0304049|FBtr0300555 328814|328814|328814|328814|328191|328814|328814|328814 329206|329206|329206|329206|329206|329206|329206|331564 AGCTGTGA 8mer-A1 dme-miR-1008-3p 4 - 329018 329110 3'utr PMCA FlyBase G42920.1 AAAAAAGGTTTTGTTCAGGATAACAGCAATGTAGCTGTGAATTGGTTAAAAAGCATTTTGTAATTCAGCAAAAATAATCCGTAAAAAAAATGT 11 329080 0.97955405 7 11 72 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 4:329018-329110 8 8.5 3036 FBgn0259214 5766.78 152.7933333 233.7433333 0.001473959 0.055630699 0.036364674 2 2 2 0.2 dme-miR-14-3p 6mer2-7 AGACTG 4 331503 331508 - 4_331503_331508_- 0.752755372 0.707861627 0.730308499 0.03174471 PMCA FBtr0300555|FBtr0304050|FBtr0300558 328814|329515|330854 331564|331564|331564 4 - 331448 331535 5'utr PMCA FlyBase G56825.1 TGGTTAAGCCTATAACAATTCCAAATTAGACTGGTTATGCTTCTCAAAGCGCAATCCCAAATCAATGGCCCAGCTCAATGTGGCTATT 446 331510 0.911479992 14 436 3056 0.978873239 2.1430148 0.001760563 0.210762332 0.38028169 446 9 3 556 4:331448-331535 6 PMCA FBtr0300558|FBtr0300555|FBtr0304050 330854|328814|329515 331564|331564|331564 AGACTG 6mer2-7 dme-miR-14-3p 4 - 331461 331609 stop_codon PMCA FlyBase G42928.1 ATCGAAACTAAACATTCCAATGGACAGAATGAGACTCGAATTTAAATGGTTTTAGTGGGTGTTTGCACCAAATATGGTTAAGCCTATAACAATTCCAAATTAGACTGGTTATGCTTCTCAAAGCGCAATCCCAAATCAATGGCCCAGCT 379 331510 0.972817175 14 369 2212 0.980506823 2.099507994 0.097465887 0.295514512 0.479532164 379 7 3 503 4:331461-331609 6 351 3037 FBgn0259214 5766.78 152.7933333 233.7433333 0.060865856 2.297220647 1.501647106 2 2 2 0.2 dme-miR-965-3p 6mer3-8 TACGCT 4 372497 372502 + 4_372497_372502_+ 0.999767808 0.999623169 0.999695488 0.000102248 Hcf FBtr0334479|FBtr0345284|FBtr0089126|FBtr0089125|FBtr0307379 372391|372391|372391|372391|372391 372784|375554|372784|374973|372784 4 + 372451 372540 3'utr Hcf FlyBase G56327.1 AAAGTATGCTATTAGCTTTTCCGTTTTTACAGCTTCCAATAGACTTTACGCTGAATTCAAAATGATTACAACGAAACTTGAATATTATTG 56 372490 0.794175169 8 55 386 0.98630137 1.857332496 0.150684932 0.196428571 0.383561644 56 1 0 72 4:372451-372540 6 Hcf FBtr0089125|FBtr0307379|FBtr0345284|FBtr0089126|FBtr0334479 372391|372391|372391|372391|372391 374973|372784|375554|372784|372784 TACGCT 6mer3-8 dme-miR-965-3p 4 + 372476 372547 3'utr Hcf FlyBase G42525.1 TTTACAGCTTCCAATAGACTTTACGCTGAATTCAAAATGATTACAACGAAACTTGAATATTATTGCTATTAA 30 372491 0.980375031 7 28 199 0.956521739 1.643452676 0.152173913 0.333333333 0.565217391 30 2 0 44 4:372476-372547 6 38 3038 FBgn0039904 2694.423333 58.45333333 89.53333333 0.014103203 0.650091241 0.424422934 7 6 6.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 4 372718 372723 + 4_372718_372723_+ 0.994471437 0.997141708 0.995806572 0.001888187 Hcf FBtr0334479|FBtr0345284|FBtr0089126|FBtr0089125|FBtr0307379 372391|372391|372391|372391|372391 372784|375554|372784|374973|372784 4 + 372677 372729 3'utr Hcf FlyBase G56329.1 AATAATATATAATATTTTCCTTATCATGAACTCTACAACACTCTAGTGTATAT 12 372704 0.984352927 6 10 84 0.9375 0.875061263 0 0.166666667 0.375 12 0 1 15 4:372677-372729 6 Hcf FBtr0089125|FBtr0307379|FBtr0345284|FBtr0089126|FBtr0334479 372391|372391|372391|372391|372391 374973|372784|375554|372784|372784 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 4 + 372687 372727 3'utr Hcf FlyBase G42527.1 AATATTTTCCTTATCATGAACTCTACAACACTCTAGTGTAT 5 372697 0.982720845 4 4 30 1 0.903089987 0 0.4 0.625 5 0 0 8 4:372687-372727 6 4.5 3039 FBgn0039904 2694.423333 58.45333333 89.53333333 0.001670116 0.076984489 0.050260611 14 21 17.5 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 4 437069 437074 - 4_437069_437074_- 0.984697511 0.964151771 0.974424641 0.014528004 lgs FBtr0089111 436955 437385 4 - 437049 437096 3'utr lgs FlyBase G56865.1 TTAATATGTGCGCTGCTCTCTCTGTGTTAAATGAAATTAAAATATATA 111 437076 0.982241423 10 106 967 0.95035461 1.649983544 0.517730496 0.216216216 0.382978723 111 5 2 134 4:437049-437096 6 lgs FBtr0089111 436955 437385 TGTGTT 6mer3-8 dme-miR-317-3p 4 - 437056 437094 3'utr lgs FlyBase G42953.1 AATATGTGCGCTGCTCTCTCTGTGTTAAATGAAATTAAA 77 437076 0.738180252 6 69 679 0.900826446 2.037426498 0.52892562 0.402597403 0.619834711 77 12 0 109 4:437056-437094 6 94 3040 FBgn0039907 1610.766667 36.50666667 56.17666667 0.058357304 2.574872169 1.673292589 2 2 2 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 4 453270 453276 + 4_453270_453276_+ 0.654969645 0.651021076 0.65299536 0.002792011 CaMKI FBtr0089067|FBtr0333670|FBtr0089069|FBtr0089063|FBtr0089065 453198|453198|453198|453198|453198 453947|453947|453947|453947|453947 4 + 453246 453349 3'utr CaMKI FlyBase G56343.1 ACATTTTTGAATTTTAACAATTGTTCTAGTCTAGTAAATATCTCGTACTAACGAATCCGATATAATTTCTCAATCGAAAATGCCAATCAAATAACATATAATGT 32 453268 0.98966367 8 30 286 0.952380952 1.602059991 0.119047619 0.1875 0.380952381 32 2 0 40 4:453246-453349 7 CaMKI FBtr0089065|FBtr0089063|FBtr0089069|FBtr0333670|FBtr0089067 453198|453198|453198|453198|453198 453947|453947|453947|453947|453947 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 4 + 453254 453284 3'utr CaMKI FlyBase G42538.1 GAATTTTAACAATTGTTCTAGTCTAGTAAAT 9 453269 0.611747169 5 7 75 0.75 1.079181246 0.4375 0.444444444 0.6875 9 4 0 12 4:453254-453284 7 18 3041 FBgn0016126 937.6466667 46.26 70.96333333 0.019196997 0.389105058 0.253652121 2 1 1.5 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 4 453799 453804 + 4_453799_453804_+ 0.937410121 0.971154794 0.954282457 0.023861106 CaMKI FBtr0089067|FBtr0333670|FBtr0089069|FBtr0089063|FBtr0089065 453198|453198|453198|453198|453198 453947|453947|453947|453947|453947 4 + 453778 453827 3'utr CaMKI FlyBase G56346.1 TCTTAAGCAGATGATTTGGTGTTGACTGGAAATTTTTAGTATTAAGATGT 13 453799 0.963684023 8 9 124 0.75 0.602059991 0.25 0.153846154 0.3125 13 2 2 12 4:453778-453827 6 CaMKI FBtr0089065|FBtr0089063|FBtr0089069|FBtr0333670|FBtr0089067 453198|453198|453198|453198|453198 453947|453947|453947|453947|453947 TTGACT 6mer3-8 dme-miR-1012-3p 4 + 453782 453826 3'utr CaMKI FlyBase G42539.1 AAGCAGATGATTTGGTGTTGACTGGAAATTTTTAGTATTAAGATG 10 453797 0.643485661 7 9 99 0.944444444 1.230448921 0.388888889 0.5 0.722222222 10 1 0 17 4:453782-453826 6 10 3042 FBgn0016126 937.6466667 46.26 70.96333333 0.010664998 0.216169477 0.140917845 0 2 1 0.2 dme-bantam-3p 7mer-m8 TGATCTC 4 453914 453920 + 4_453914_453920_+ 0.409616093 0.424609237 0.417112665 0.010601723 CaMKI FBtr0089067|FBtr0333670|FBtr0089069|FBtr0089063|FBtr0089065 453198|453198|453198|453198|453198 453947|453947|453947|453947|453947 4 + 453875 453930 3'utr CaMKI FlyBase G56347.1 CTTTCTTGTAACAAATATATATATTAAACATCCCAAGCGTGATCTCCCCAAAGATT 32 453914 0.946817697 3 30 129 0.88372093 1.579783597 0.023255814 0.25 0.441860465 32 5 0 38 4:453875-453930 7 CaMKI FBtr0089065|FBtr0089063|FBtr0089069|FBtr0333670|FBtr0089067 453198|453198|453198|453198|453198 453947|453947|453947|453947|453947 TGATCTC 7mer-m8 dme-bantam-3p 4 + 453888 453934 3'utr CaMKI FlyBase G42540.1 AATATATATATTAAACATCCCAAGCGTGATCTCCCCAAAGATTATGT 24 453914 0.922171525 3 23 88 0.911764706 0.889301703 0.058823529 0.291666667 0.5 24 0 3 31 4:453888-453934 7 27 3043 FBgn0016126 937.6466667 46.26 70.96333333 0.028795495 0.583657588 0.380478181 0 0 0 0.2 dme-miR-980-3p 6mer3-8 GGCAGC 4 471331 471336 - 4_471331_471336_- 0.997165355 0.998487454 0.997826405 0.000934866 Asator FBtr0332906|FBtr0300344|FBtr0332905|FBtr0300342 469407|471284|471284|471284 472288|474884|472288|472288 4 - 471315 471354 3'utr Asator FlyBase G56907.1 ATTTAAAAATAAAGCGTTGGCAGCGATTGTTCTTAAAAAC 8 471337 0.794746052 3 8 51 1 0.954242509 0 0.125 0.222222222 8 0 0 9 4:471315-471354 6 Asator FBtr0332905|FBtr0300342|FBtr0332906|FBtr0300344 471284|471284|469407|471284 472288|472288|472288|474884 GGCAGC 6mer3-8 dme-miR-980-3p 4 - 471313 471346 3'utr Asator FlyBase G42985.1 ATAAAGCGTTGGCAGCGATTGTTCTTAAAAACAA 5 471337 0.950841207 3 5 28 1 0.903089987 0 0.4 0.625 5 0 0 8 4:471313-471346 6 6.5 3044 FBgn0039908 319.3933333 7.256666667 11.06333333 0.020351082 0.895728066 0.587526363 1 1 1 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 4 471683 471690 - 4_471683_471690_- 0.491832448 0.483039132 0.48743579 0.006217802 Asator FBtr0332906|FBtr0300344|FBtr0332905|FBtr0300342 469407|471284|471284|471284 472288|474884|472288|472288 4 - 471673 471716 3'utr Asator FlyBase G56909.1 AAAGTCATGGATTATGACACATTGCTGTACTTAACTACATTTTT 30 471691 0.736390248 6 29 224 0.942857143 1.51851394 0.114285714 0.133333333 0.257142857 30 2 0 33 4:471673-471716 8 Asator FBtr0332905|FBtr0300342|FBtr0332906|FBtr0300344 471284|471284|469407|471284 472288|472288|472288|474884 GTACTTAA 8mer-A1 dme-miR-252-5p 4 - 471679 471714 3'utr Asator FlyBase G42987.1 AGTCATGGATTATGACACATTGCTGTACTTAACTAC 35 471691 0.747449474 4 32 276 0.909090909 1.22184875 0.072727273 0.342857143 0.581818182 35 3 2 50 4:471679-471714 8 31.5 3045 FBgn0039908 319.3933333 7.256666667 11.06333333 0.098624476 4.340836013 2.847243146 1 1 1 0.2 dme-bantam-3p 6mer3-8 TGATCT 4 537796 537801 + 4_537796_537801_+ 0.63915147 0.643589074 0.641370272 0.003137857 zfh2 FBtr0332913 536964 538373 4 + 537754 537819 3'utr zfh2 FlyBase G56438.1 ATCACCGGTAAGAGTTTCGGGAAGATACAAAAATCATCTACTTGATCTTATCTGTTGGTCAGATTA 31 537795 0.794894459 10 30 275 0.971428571 1.531478917 0.571428571 0.129032258 0.228571429 31 1 0 34 4:537754-537819 6 zfh2 FBtr0332913 536964 538373 TGATCT 6mer3-8 dme-bantam-3p 4 + 537768 537821 3'utr zfh2 FlyBase G42615.1 TTTCGGGAAGATACAAAAATCATCTACTTGATCTTATCTGTTGGTCAGATTAAA 19 537796 0.993000632 5 16 192 0.833333333 1.397940009 0.4 0.526315789 0.7 19 5 0 25 4:537768-537821 6 22 3046 FBgn0004607 3.003333333 0.04 0.056666667 7.325194229 550 388.2352941 1 0 0.5 0.2 dme-miR-276a-3p 7mer-A1 GTTCCTA 4 538876 538882 + 4_538876_538882_+ 0.489134457 0.604831665 0.546983061 0.081810275 zfh2 FBtr0307167|FBtr0089070 538553|538553 540874|539792 4 + 538832 539197 3'utr zfh2 FlyBase G56444.1 AACCTATTCCAACATTAGTAAGAATCTCTAAATTAAACGGAAGTGTTCCTAACTATTCGAAATATAAATTAGCAATAAACTTAAGGTATACACACTTGAGGCAATCCTTAACAATTCAAGATGGAGGGCGTTATCATGATAAGTTAAAATAACAAGTCGCTCCAAACAAAAATATGATATCATATAGATACATATATAATGAACTAGATTTAGTGAAATGTAAACTGAGTTCCTAGCATTTGATTGCTTTTGCCTTTGTTTTTATATTAGAATGTAGCCAATGAATACTAAGATCTGCTTCAGTATGCCGAATATAAAAGCTGAAATATATACATACGTGGTTCCTATTTTATTTAGAAACACTGT 507 538875 0.946271834 53 497 3521 0.982113821 2.303915684 0.045528455 0.169625247 0.315447154 507 9 2 604 4:538832-539197 7 zfh2 FBtr0307167|FBtr0089070 538553|538553 540874|539792 GTTCCTA 7mer-A1 dme-miR-276a-3p 4 + 538827 538902 3'utr zfh2 FlyBase G42622.1 GCGAAAACCTATTCCAACATTAGTAAGAATCTCTAAATTAAACGGAAGTGTTCCTAACTATTCGAAATATAAATTA 129 538875 0.976065097 6 128 822 0.994897959 2.290034611 0.005102041 0.356589147 0.576530612 129 1 0 195 4:538827-538902 7 206 3047 FBgn0004607 3.003333333 0.04 0.056666667 68.59045505 5150 3635.294118 1 1 1 0.2 dme-miR-970-3p 7mer-m8 TCTTATG 4 539232 539238 + 4_539232_539238_+ 0.60798684 0.489057704 0.548522272 0.084095573 zfh2 FBtr0307167|FBtr0089070 538553|538553 540874|539792 4 + 539221 539276 3'utr zfh2 FlyBase G56445.1 ATTTACGTCATTCTTATGGTGAGAGAATCGTGCCAATAATTTGTTCTGCAGAAAAT 20 539231 0.741441974 6 19 149 1 1.361727836 0.391304348 0.15 0.260869565 20 0 0 23 4:539221-539276 7 zfh2 FBtr0307167|FBtr0089070 538553|538553 540874|539792 TCTTATG 7mer-m8 dme-miR-970-3p 4 + 539221 539272 3'utr zfh2 FlyBase G42625.1 ATTTACGTCATTCTTATGGTGAGAGAATCGTGCCAATAATTTGTTCTGCAGA 6 539231 0.986592928 5 6 48 1 0.903089987 0.5 0.166666667 0.375 6 0 0 8 4:539221-539272 7 11 3048 FBgn0004607 3.003333333 0.04 0.056666667 3.662597114 275 194.1176471 1 1 1 0.2 dme-miR-13b-2-5p 6mer3-8 TTTGAC 4 539704 539709 + 4_539704_539709_+ 0.966546693 0.965133665 0.965840179 0.000999142 zfh2 FBtr0307167|FBtr0089070 538553|538553 540874|539792 4 + 539687 539733 3'utr zfh2 FlyBase G56447.1 TTTAAAAGAAAATAATATTTGACTGAAAATTAAAATATAAAAAAATT 89 539704 0.686349165 6 82 640 0.927272727 1.707570176 0 0.213483146 0.363636364 89 7 1 102 4:539687-539733 6 zfh2 FBtr0307167|FBtr0089070 538553|538553 540874|539792 TTTGAC 6mer3-8 dme-miR-13b-2-5p 4 + 539689 539736 3'utr zfh2 FlyBase G42627.1 TAAAAGAAAATAATATTTGACTGAAAATTAAAATATAAAAAAATTAAA 44 539704 0.660890058 7 42 323 0.936507937 1.293730757 0 0.318181818 0.523809524 44 2 2 59 4:539689-539736 6 66.5 3049 FBgn0004607 3.003333333 0.04 0.056666667 22.14206437 1662.5 1173.529412 0 0 0 0.2 dme-miR-276a-3p 8mer-A1 AGTTCCTA 4 539872 539879 + 4_539872_539879_+ 0.600918815 0.483002773 0.541960794 0.083379203 zfh2 FBtr0307167 538553 540874 4 + 539857 539918 3'utr zfh2 FlyBase G56448.1 AAGAATCTACTAAGAAGTTCCTATAGAATTTAATAAAAAGATATACAAATATATTTACGTGT 41 539863 0.8646097 9 24 357 0.565217391 0.812913357 0.065217391 0.12195122 0.217391304 41 17 3 26 4:539857-539918 8 zfh2 FBtr0307167 538553 540874 AGTTCCTA 8mer-A1 dme-miR-276a-3p 4 + 539858 539897 3'utr zfh2 FlyBase G42629.1 AGAATCTACTAAGAAGTTCCTATAGAATTTAATAAAAAGA 20 539864 0.804114552 8 17 157 0.88 0.865301426 0 0.2 0.36 20 1 2 22 4:539858-539897 8 29 3050 FBgn0004607 3.003333333 0.04 0.056666667 9.655937847 725 511.7647059 9 8 8.5 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 4 540045 540052 + 4_540045_540052_+ 0.468369632 0.453689128 0.46102938 0.010380681 zfh2 FBtr0307167 538553 540874 4 + 539988 540099 3'utr zfh2 FlyBase G56449.1 TGTAGAAATAATGTCATATATAAATATGTGAATGTTTGAAATCCCATTTAAATACATGTACTTAAGCCTTCACAATTGCCAACAAACACAGATATGGACAGAATACCATACT 64 540044 0.921574665 9 62 441 0.974025974 1.875061263 0.090909091 0.171875 0.311688312 64 2 0 75 4:539988-540099 8 zfh2 FBtr0307167 538553 540874 GTACTTAA 8mer-A1 dme-miR-252-5p 4 + 540027 540092 3'utr zfh2 FlyBase G42632.1 AATCCCATTTAAATACATGTACTTAAGCCTTCACAATTGCCAACAAACACAGATATGGACAGAATA 40 540044 0.890217003 5 38 232 0.920634921 1.161368002 0.015873016 0.4 0.619047619 40 2 3 58 4:540027-540092 8 42 3051 FBgn0004607 3.003333333 0.04 0.056666667 13.98446171 1050 741.1764706 1 1 1 0.2 dme-miR-184-3p 7mer-m8 TCCGTCC 4 542001 542007 - 4_542001_542007_- 0.659597315 0.659431368 0.659514341 0.000117309 Thd1 FBtr0345197|FBtr0333706 538330|540558 545662|545662 4 - 541984 542027 3'utr Thd1 FlyBase G56931.1 ATCGAGTCGAACTGGCCATTTCCGTCCGTCTGAGGGCTCATCTT 36 542008 0.753355223 4 35 258 0.976190476 1.612783857 0.238095238 0.166666667 0.285714286 36 1 0 41 4:541984-542027 7 Thd1 FBtr0333706|FBtr0345197 540558|538330 545662|545662 TCCGTCC 7mer-m8 dme-miR-184-3p 4 - 541984 542025 3'utr Thd1 FlyBase G42999.1 CGAGTCGAACTGGCCATTTCCGTCCGTCTGAGGGCTCATCTT 22 542008 0.762194712 3 22 158 1 1.477121255 0.233333333 0.318181818 0.5 22 0 0 30 4:541984-542025 7 29 3052 FBgn0026869 3486.926667 66.67 102.3333333 0.008316779 0.434978251 0.283387622 1 1 1 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA 4 545346 545353 - 4_545346_545353_- 0.499685798 0.499372905 0.499529351 0.000221254 Thd1 FBtr0345197|FBtr0089106|FBtr0333706 538330|545266|540558 545662|545662|545662 4 - 545333 545368 3'utr Thd1 FlyBase G56939.2 CCGAAACAATTGTTTGTACTTAAATCATTTAAGCAT 53 545354 0.697814862 4 48 487 0.938461538 1.785329835 0.076923077 0.188679245 0.338461538 53 4 0 61 4:545333-545368 8 Thd1 FBtr0333706|FBtr0345197 540558|538330 545662|545662 GTACTTAA 8mer-A1 dme-miR-252-5p 4 - 545266 545372 3'utr Thd1 FlyBase G43004.1 GATCCCGAAACAATTGTTTGTACTTAAATCATTTAAGCATACTTTATTTTACTCACACACAAATATTGCGAAACTTACTAGTATATAATAAAGTTTTAAAATAATAA 41 545354 0.978728484 10 38 385 0.927272727 1.40654018 0.163636364 0.268292683 0.454545455 41 3 1 51 4:545266-545372 8 41.5 3053 FBgn0026869 3486.926667 66.67 102.3333333 0.011901598 0.622468877 0.405537459 1 1 1 0.2 dme-miR-2535b-3p 6mer3-8 CCGTGA 4 565765 565770 + 4_565765_565770_+ 0.968644891 0.87148912 0.920067006 0.068699525 Pur-alpha FBtr0310640|FBtr0089995|FBtr0089994|FBtr0310639|FBtr0089993|FBtr0310638|FBtr0089996 565755|565755|565755|565755|565755|565755|565755 567257|565931|565931|565931|567257|567257|565931 4 + 565741 565795 stop_codon Pur-alpha FlyBase G56460.2 AAATAGTCTTAAATAAACAACATACCGTGATTTACTAAGTTATATAAGAAGGCGC 93 565772 0.650600224 7 92 544 0.991304348 2.056904851 0 0.204301075 0.356521739 93 1 0 114 4:565741-565795 6 Pur-alpha FBtr0310639|FBtr0089994|FBtr0089995|FBtr0310640|FBtr0089996|FBtr0310638|FBtr0089993 565755|565755|565755|565755|565755|565755|565755 565931|565931|565931|567257|565931|567257|567257 CCGTGA 6mer3-8 dme-miR-2535b-3p 4 + 565683 565789 stop_codon Pur-alpha FlyBase G42638.1 AGAAAATGAAAAAATCGTCCGACTCAATTACTGCCGAAATTAACTTACCTACATCTTCAAATAGTCTTAAATAAACAACATACCGTGATTTACTAAGTTATATAAGA 93 565772 0.916697773 11 90 496 0.972972973 1.857332496 0.027027027 0.451612903 0.655405405 93 3 1 144 4:565683-565789 6 82 3054 FBgn0022361 255.0033333 15.47333333 23.55666667 0.321564424 5.299439897 3.480967879 -7 -7 -7 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 4 566727 566732 + 4_566727_566732_+ 0.730915286 0.730941362 0.730928324 1.85E-05 Pur-alpha FBtr0310640|FBtr0310640|FBtr0310640|FBtr0089993|FBtr0089993|FBtr0089993|FBtr0310638|FBtr0310638|FBtr0310638 565755|565755|565755|565755|565755|565755|565755|565755|565755 567257|567257|567257|567257|567257|567257|567257|567257|567257 4 + 566697 566788 3'utr Pur-alpha FlyBase G56466.1 CCTAAACTCGTTTTTAAAACAAAAGTTTCATGTGATCACGTAGAATAAAAACTTACTAAGTACGATGAACATGCATAGCAAAATAACAACAT 166 566724 0.92125605 13 145 1139 0.875 1.604765885 0.130434783 0.096385542 0.184782609 166 20 3 161 4:566697-566788 6 Pur-alpha FBtr0310640|FBtr0310640|FBtr0310640|FBtr0310638|FBtr0310638|FBtr0310638|FBtr0089993|FBtr0089993|FBtr0089993 565755|565755|565755|565755|565755|565755|565755|565755|565755 567257|567257|567257|567257|567257|567257|567257|567257|567257 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 4 + 566700 566766 3'utr Pur-alpha FlyBase G42642.1 AAACTCGTTTTTAAAACAAAAGTTTCATGTGATCACGTAGAATAAAAACTTACTAAGTACGATGAAC 99 566724 0.98569285 7 79 673 0.817567568 1.605664116 0.101351351 0.333333333 0.554054054 99 25 2 121 4:566700-566766 6 124.5 3055 FBgn0022361 255.0033333 15.47333333 23.55666667 0.488228912 8.046100819 5.28512806 3 3 3 0.2 dme-miR-1006-3p 6mer2-7 GAATTT 4 566909 566914 + 4_566909_566914_+ 0.502208706 0.958978631 0.730593669 0.322985094 Pur-alpha FBtr0310640|FBtr0089993|FBtr0310638 565755|565755|565755 567257|567257|567257 4 + 566864 566931 3'utr Pur-alpha FlyBase G56467.1 AGTAATAAATTAGCTGTACTAATTATTAAGTATTGAAATTTATCAGAATTTGGGTTCAATAAAGAGAG 6 566913 0.978086135 2 6 48 1 0.77815125 0.5 0 0 6 0 0 6 4:566864-566931 6 Pur-alpha FBtr0310640|FBtr0310638|FBtr0089993 565755|565755|565755 567257|567257|567257 GAATTT 6mer2-7 dme-miR-1006-3p 4 + 566896 566932 3'utr Pur-alpha FlyBase G42643.1 TTGAAATTTATCAGAATTTGGGTTCAATAAAGAGAGA 5 566917 0.970693568 2 5 34 1 0.903089987 0.125 0.4 0.625 5 0 0 8 4:566896-566932 6 5 3056 FBgn0022361 255.0033333 15.47333333 23.55666667 0.019607587 0.323136579 0.212254139 -4 -8 -6 0.2 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 4 577873 577879 + 4_577873_577879_+ 0.823309556 0.822150783 0.822730169 0.000819395 Ephrin FBtr0089076|FBtr0089077|FBtr0089075 577321|577321|577321 578143|580122|578143 4 + 577861 577903 3'utr Ephrin FlyBase G56490.1 CAGCTATATTTTTACCTGACTTCGCGTCTATTAGCTAAAATGA 8 577871 0.868935113 4 6 55 0.777777778 0.84509804 0.222222222 0.125 0.222222222 8 2 0 7 4:577861-577903 7 Ephrin FBtr0089077|FBtr0089075|FBtr0089076 577321|577321|577321 580122|578143|578143 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 4 + 577860 577890 3'utr Ephrin FlyBase G42658.1 ACAGCTATATTTTTACCTGACTTCGCGTCTA 7 577871 0.675684281 2 7 63 1 1.146128036 0 0.714285714 0.857142857 7 0 0 14 4:577860-577890 7 6.5 3057 FBgn0040324 1976.393333 63.49666667 97.38666667 0.003288819 0.102367578 0.06674425 2 2 2 0.2 dme-miR-8-3p 6mer3-8 CAGTAT 4 578372 578377 + 4_578372_578377_+ 0.885698939 0.937051628 0.911375283 0.036311842 Ephrin FBtr0089077 577321 580122 4 + 578347 578395 3'utr Ephrin FlyBase G56494.1 AATTTTATTTTGTAAATGAACCAAGCAGTATAGAGAAGTGATTCTTAAC 21 578390 0.738015224 8 18 127 0.88 1.342422681 0.24 0.19047619 0.32 21 3 0 22 4:578347-578395 6 Ephrin FBtr0089077 577321 580122 CAGTAT 6mer3-8 dme-miR-8-3p 4 + 578347 578395 3'utr Ephrin FlyBase G42661.1 AATTTTATTTTGTAAATGAACCAAGCAGTATAGAGAAGTGATTCTTAAC 22 578390 0.95241322 6 18 111 0.857142857 1.477121255 0.114285714 0.409090909 0.628571429 22 5 0 30 4:578347-578395 6 21.5 3058 FBgn0040324 1976.393333 63.49666667 97.38666667 0.010878401 0.338600451 0.220769441 -18 -18 -18 0.2 dme-miR-932-5p 6mer3-8 GGAATT 4 620290 620295 + 4_620290_620295_+ 0.999998571 0.978627203 0.989312887 0.015111862 Eph FBtr0301285 620104 620734 4 + 620268 620360 5'utr Eph FlyBase G56526.1 AGCTCAACAACTTTCGGACATGGGAATTACTTTAGTTGGACATCAAAAAAAGATCTTACATCAAGCCCGGCAACTCGACACTATAATATAAAC 25 620296 0.886773682 11 19 138 0.709677419 1.342422681 0.322580645 0.2 0.35483871 25 9 0 22 4:620268-620360 6 Eph FBtr0301285 620104 620734 GGAATT 6mer3-8 dme-miR-932-5p 4 + 620260 620360 5'utr Eph FlyBase G42685.1 AGGTTAACAGCTCAACAACTTTCGGACATGGGAATTACTTTAGTTGGACATCAAAAAAAGATCTTACATCAAGCCCGGCAACTCGACACTATAATATAAAC 16 620303 0.958889895 11 14 70 0.913043478 1.021189299 0.260869565 0.375 0.565217391 16 1 1 21 4:620260-620360 6 5.5 3059 FBgn0025936 2044.833333 61.14666667 93.30666667 0.002689706 0.089947667 0.058945413 -6 -13 -9.5 0.2 dme-miR-307a-3p 7mer-A1 GTTGTGA 4 620793 620799 + 4_620793_620799_+ 0.669344889 0.662287912 0.6658164 0.004990053 Eph FBtr0089086|FBtr0089082|FBtr0089084|FBtr0089083 620357|620357|620357|620357 622470|620926|620926|620926 4 + 620680 620838 3'utr Eph FlyBase G56528.1 TATACCTTATATATCAATGTGTACCAATTATTTATTATACGAACAATTTTCAAGCTTATTATTATAAGAGTTTAGAGGCGCTATGATTGCCTTGCTATATTTTACCTTTTTTTGTTGTGATAGAAGTGGAATTAAAGAACTATTCATCTTTATTAGATT 190 620793 0.822310191 33 182 2146 0.960352423 1.639486489 0.383259912 0.163157895 0.299559471 190 5 4 218 4:620680-620838 7 Eph FBtr0089084|FBtr0089083|FBtr0089082|FBtr0089086 620357|620357|620357|620357 620926|620926|620926|622470 GTTGTGA 7mer-A1 dme-miR-307a-3p 4 + 620717 620882 3'utr Eph FlyBase G42688.1 TACGAACAATTTTCAAGCTTATTATTATAAGAGTTTAGAGGCGCTATGATTGCCTTGCTATATTTTACCTTTTTTTGTTGTGATAGAAGTGGAATTAAAGAACTATTCATCTTTATTAGATTATATTTCATGGTTTACTTTGCATAAAATAGTGAAAAACTCAATA 101 620793 0.992723967 25 93 1080 0.925170068 1.531478917 0.31292517 0.326732673 0.537414966 101 8 3 136 4:620717-620882 7 103 3060 FBgn0025936 2044.833333 61.14666667 93.30666667 0.050370853 1.684474488 1.103886825 0 0 0 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 4 649519 649524 - 4_649519_649524_- 0.947394375 0.934719277 0.941056826 0.008962649 gw FBtr0310542 649039 650256 4 - 649483 649548 3'utr gw FlyBase G57001.1 TGTTTCCAGTAAGGAAAAAATACCTGTGTTATATTCATTAGAGGAAGTTGTAATCGTATTACGGTT 29 649517 0.804503373 10 24 239 0.78125 1.397940009 0.09375 0.103448276 0.1875 29 7 0 25 4:649483-649548 6 gw FBtr0310542 649039 650256 TGTGTT 6mer3-8 dme-miR-317-3p 4 - 649443 649549 3'utr gw FlyBase G43060.1 GTGTTTCCAGTAAGGAAAAAATACCTGTGTTATATTCATTAGAGGAAGTTGTAATCGTATTACGGTTTTGCTTTCATCAAAGCATTCCCACCGAAAAAGTTCGGCTA 26 649520 0.982673745 10 23 181 0.852941176 1.462397998 0.323529412 0.269230769 0.441176471 26 5 0 29 4:649443-649549 6 20.5 3061 FBgn0051992 3462.52 78.52666667 120.4066667 0.005920543 0.261057815 0.170256353 -7 -4 -5.5 0.2 dme-miR-1012-3p 6mer3-8 TTGACT 4 649896 649901 - 4_649896_649901_- 0.869254567 0.892242129 0.880748348 0.016254617 gw FBtr0310542 649039 650256 4 - 649819 649957 3'utr gw FlyBase G57003.1 AAAAAAAAAATGGCATGCTTGATGGTTTGCAAACCTTCCTATTTAAGTAAAGTGTTTTGACTCTGGCTCCCAAAGCTTTCCTTGGGAAACGGGAAAAATTCTCTACAGTGTATATGTGCGCATGCAAACTCATTTGGTA 67 649894 0.907529511 21 67 444 1 1.903089987 0.2625 0.164179104 0.3 67 0 0 80 4:649819-649957 6 gw FBtr0310542 649039 650256 TTGACT 6mer3-8 dme-miR-1012-3p 4 - 649796 649913 3'utr gw FlyBase G43062.1 AAGTAAAGTGTTTTGACTCTGGCTCCCAAAGCTTTCCTTGGGAAACGGGAAAAATTCTCTACAGTGTATATGTGCGCATGCAAACTCATTTGGTAAATTACACATTAATAAATATGTA 45 649894 0.982177047 16 42 311 0.927536232 1.806179974 0.202898551 0.422222222 0.623188406 45 5 0 64 4:649796-649913 6 30 3062 FBgn0051992 3462.52 78.52666667 120.4066667 0.00866421 0.382035826 0.249155639 -7 -7 -7 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 4 686100 686106 + 4_686100_686106_+ 0.655765076 0.658156396 0.656960736 0.001690904 CG11360 FBtr0089091|FBtr0310540|FBtr0310539|FBtr0310541 686039|686039|686039|686039 689595|687565|690650|687565 4 + 686071 686152 3'utr CG11360 FlyBase G56563.1 TTGTTAGTTTTTAGTTAGTCGGTTACACATCTAGTCGTGGCTTCCGTGAAGTCTATTAACATTAGTTGAACGTTCAGGGATT 96 686100 0.980332826 14 94 780 0.983606557 1.77815125 0.319672131 0.197916667 0.368852459 96 1 1 120 4:686071-686152 7 CG11360 FBtr0310541|FBtr0310539|FBtr0310540|FBtr0089091 686039|686039|686039|686039 687565|690650|687565|689595 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 4 + 686071 686152 3'utr CG11360 FlyBase G42715.1 TTGTTAGTTTTTAGTTAGTCGGTTACACATCTAGTCGTGGCTTCCGTGAAGTCTATTAACATTAGTTGAACGTTCAGGGATT 63 686100 0.760560493 11 60 483 0.968421053 1.662757832 0.442105263 0.380952381 0.589473684 63 2 1 92 4:686071-686152 7 66 3063 FBgn0039920 1210.836667 29.66666667 45.19333333 0.054507765 2.224719101 1.460392388 0 0 0 0.2 dme-miR-317-3p 6mer3-8 TGTGTT 4 687363 687368 + 4_687363_687368_+ 0.999997374 0.999997235 0.999997304 1.41E-07 CG11360 FBtr0089091|FBtr0310540|FBtr0310539|FBtr0310541 686039|686039|686039|686039 689595|687565|690650|687565 4 + 687347 687383 3'utr CG11360 FlyBase G56564.1 GATATAAAAATTTTTCTGTGTTTTAGGAAGTCATCTA 16 687360 0.697213565 7 14 171 0.9 1.255272505 0.25 0.1875 0.35 16 2 0 18 4:687347-687383 6 CG11360 FBtr0310541|FBtr0310539|FBtr0310540|FBtr0089091 686039|686039|686039|686039 687565|690650|687565|689595 TGTGTT 6mer3-8 dme-miR-317-3p 4 + 687339 687385 3'utr CG11360 FlyBase G42717.1 GAATAGCGGATATAAAAATTTTTCTGTGTTTTAGGAAGTCATCTATA 10 687361 0.988469687 4 8 110 0.727272727 0.602059991 0.454545455 0.1 0.181818182 10 2 1 8 4:687339-687385 6 13 3064 FBgn0039920 1210.836667 29.66666667 45.19333333 0.010736378 0.438202247 0.287653046 3 2 2.5 0.2 dme-miR-2b-2-5p 7mer-A1 TGAAGAA 4 687457 687463 + 4_687457_687463_+ 0.82088753 0.822065374 0.821476452 0.000832901 CG11360 FBtr0089091|FBtr0310540|FBtr0310539|FBtr0310541 686039|686039|686039|686039 689595|687565|690650|687565 4 + 687421 687474 3'utr CG11360 FlyBase G56565.1 AAGTAGAACAAACCCAAATTCTATTGAAGACCTTAGTGAAGAATTTTAATAGTG 11 687454 0.976640334 6 11 74 1 1.146128036 0.071428571 0.272727273 0.428571429 11 0 0 14 4:687421-687474 7 CG11360 FBtr0310541|FBtr0310539|FBtr0310540|FBtr0089091 686039|686039|686039|686039 687565|690650|687565|689595 TGAAGAA 7mer-A1 dme-miR-2b-2-5p 4 + 687424 687470 3'utr CG11360 FlyBase G42718.1 TAGAACAAACCCAAATTCTATTGAAGACCTTAGTGAAGAATTTTAAT 7 687465 0.969190367 6 7 42 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 4:687424-687470 7 7.5 3065 FBgn0039920 1210.836667 29.66666667 45.19333333 0.006194064 0.252808989 0.16595368 3 -8 -2.5 0.2 dme-bantam-3p 6mer3-8 TGATCT 4 688446 688451 + 4_688446_688451_+ 0.811765248 0.999068441 0.905416845 0.132443363 CG11360 FBtr0089091|FBtr0310539 686039|686039 689595|690650 4 + 688427 688467 3'utr CG11360 FlyBase G56567.1 GTTGACGTTGTGAAATTCCTGATCTGTTATAAAACTTTAAA 18 688453 0.684799664 7 16 154 0.954545455 1.322219295 0.045454545 0.111111111 0.272727273 18 1 0 21 4:688427-688467 6 CG11360 FBtr0310539|FBtr0089091 686039|686039 690650|689595 TGATCT 6mer3-8 dme-bantam-3p 4 + 688427 688458 3'utr CG11360 FlyBase G42719.1 GTTGACGTTGTGAAATTCCTGATCTGTTATAA 6 688454 0.887859386 4 6 52 1 1 0 0.333333333 0.6 6 0 0 10 4:688427-688458 6 11.5 3066 FBgn0039920 1210.836667 29.66666667 45.19333333 0.009497565 0.387640449 0.25446231 -7 -8 -7.5 0.2 dme-miR-184-5p 6mer3-8 TGATAA 4 688895 688900 + 4_688895_688900_+ 0.992054123 0.898980218 0.945517171 0.065813186 CG11360 FBtr0089091|FBtr0310539 686039|686039 689595|690650 4 + 688857 688947 3'utr CG11360 FlyBase G56569.1 ACTTTATGATACTAATTCTCTGAAAAATTTAAAACGACTGATAAATTAGCATAAATATTAAGATCGGACACAATATATATATACATAAATA 41 688902 0.791741347 7 35 301 0.840909091 1.568201724 0.045454545 0.073170732 0.136363636 41 7 0 37 4:688857-688947 6 CG11360 FBtr0310539|FBtr0089091 686039|686039 690650|689595 TGATAA 6mer3-8 dme-miR-184-5p 4 + 688804 688914 3'utr CG11360 FlyBase G42720.1 ATTTATTTTTAAACAACAAACATGATGAAAAATATATTGTATCTATAAAGTAAACTTTATGATACTAATTCTCTGAAAAATTTAAAACGACTGATAAATTAGCATAAATAT 29 688884 0.987200865 11 24 211 0.880952381 1.568201724 0.071428571 0.344827586 0.547619048 29 5 0 37 4:688804-688914 6 27 3067 FBgn0039920 1210.836667 29.66666667 45.19333333 0.022298631 0.91011236 0.59743325 -7 11 2 0.2 dme-miR-282-5p 7mer-m8 AGAGGCT 4 689247 689253 + 4_689247_689253_+ 0.50459051 0.579272347 0.541931429 0.052808007 CG11360 FBtr0089091|FBtr0310539 686039|686039 689595|690650 4 + 689178 689278 3'utr CG11360 FlyBase G56572.1 TGTTATACCTGTGTTTTAAAATTGTGTACTGTGCTTCAAGGTTAAATGAATCAATCGAAAATTTGTAATAGAGGCTGGCTTATATATATTTAAATGTATAA 64 689246 0.987691718 10 62 557 0.972972973 1.857332496 0.081081081 0.15625 0.27027027 64 2 0 72 4:689178-689278 7 CG11360 FBtr0310539|FBtr0089091 686039|686039 690650|689595 AGAGGCT 7mer-m8 dme-miR-282-5p 4 + 689229 689273 3'utr CG11360 FlyBase G42724.1 CAATCGAAAATTTGTAATAGAGGCTGGCTTATATATATTTAAATG 30 689246 0.875599858 5 30 230 1 1.653212514 0.022222222 0.4 0.6 30 0 0 45 4:689229-689273 7 42.5 3068 FBgn0039920 1210.836667 29.66666667 45.19333333 0.035099697 1.43258427 0.940404189 1 1 1 0.2 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 4 689631 689637 + 4_689631_689637_+ 0.61941904 0.619974719 0.61969688 0.000392939 CG11360 FBtr0310539 686039 690650 4 + 689612 689657 3'utr CG11360 FlyBase G56576.1 TTAAATAAAACGGTATCTATGGTGCTTATAACAAACTTGAACCATA 36 689631 0.773776222 2 36 292 1 1.633468456 0 0.194444444 0.325581395 36 0 0 43 4:689612-689657 7 CG11360 FBtr0310539 686039 690650 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 4 + 689615 689651 3'utr CG11360 FlyBase G42727.1 AATAAAACGGTATCTATGGTGCTTATAACAAACTTGA 18 689631 0.723881904 5 17 132 0.964285714 1.431363764 0.071428571 0.388888889 0.607142857 18 1 0 27 4:689615-689651 7 26.5 3069 FBgn0039920 1210.836667 29.66666667 45.19333333 0.021885693 0.893258427 0.586369671 0 0 0 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC 4 690436 690442 + 4_690436_690442_+ 0.588421211 0.529365375 0.558893293 0.041758757 CG11360 FBtr0310539 686039 690650 4 + 690417 690460 3'utr CG11360 FlyBase G56578.1 AATATGAAAATATCCGTATTGTGTTCGACAAAAAGTAATATATC 19 690435 0.981184139 4 19 141 1 1.361727836 0 0.210526316 0.347826087 19 0 0 23 4:690417-690460 7 CG11360 FBtr0310539 686039 690650 TGTGTTC 7mer-m8 dme-miR-317-3p 4 + 690420 690448 3'utr CG11360 FlyBase G42729.1 ATGAAAATATCCGTATTGTGTTCGACAAA 11 690435 0.701129252 2 11 78 1 1.230448921 0 0.545454545 0.705882353 11 0 0 17 4:690420-690448 7 15 3070 FBgn0039920 1210.836667 29.66666667 45.19333333 0.012388128 0.505617978 0.331907361 1 1 1 0.2 dme-miR-263a-5p 6mer3-8 GTGCCA 4 691089 691094 - 4_691089_691094_- 0.640109309 0.997289991 0.81869965 0.252564895 myo FBtr0089095 690684 691990 4 - 690983 691145 3'utr myo FlyBase G57048.1 TGAAACTTATTCCGATTAGTTCCTACGATATAAGCTCGAATGCTTGGTTGAGTGCCAAAAAGAACTTATTTTTCTTATGCGTTATTTTCGAATCTTCTATTAACACTACTTGTCGCAGGATTGGCTTCTAAACGTTTGCAAGAGTACTTAGGAGTTGTCAATA 16 691100 0.983782635 12 16 133 1 1.204119983 0.1875 0 0 16 0 0 16 4:690983-691145 6 myo FBtr0089095 690684 691990 GTGCCA 6mer3-8 dme-miR-263a-5p 4 - 691074 691141 3'utr myo FlyBase G43111.1 ACTTATTCCGATTAGTTCCTACGATATAAGCTCGAATGCTTGGTTGAGTGCCAAAAAGAACTTATTTT 9 691094 0.972382134 7 8 55 1 1.079181246 0.416666667 0.222222222 0.416666667 9 0 0 12 4:691074-691141 6 5 3071 FBgn0026199 2431.316667 94.48333333 145.4933333 0.002056499 0.052919386 0.034365836 6 0 3 0.2 dme-miR-283-5p 6mer3-8 TGATAT 4 855396 855401 - 4_855396_855401_- 0.873716259 0.999659781 0.93668802 0.089055503 CG11148 FBtr0300886 853714 855509 4 - 855380 855469 5'utr CG11148 FlyBase G57100.1 AAATTTAAAATGTTATGAACTGCAGAATTGAAATAAACTTAGGTCACAAGATTATGTGCGTTAAACTCTGATATACCTAAATAAATATAT 32 855398 0.750894564 14 29 228 0.930232558 1.124938737 0.186046512 0.28125 0.465116279 32 1 2 40 4:855380-855469 6 CG11148 FBtr0300886 853714 855509 TGATAT 6mer3-8 dme-miR-283-5p 4 - 855379 855432 5'utr CG11148 FlyBase G43148.1 CTTAGGTCACAAGATTATGTGCGTTAAACTCTGATATACCTAAATAAATATATA 12 855400 0.985337594 5 9 89 0.666666667 1.079181246 0.111111111 0.25 0.5 12 6 0 12 4:855379-855432 6 13.5 3072 FBgn0039936 3661.476667 89.62 137.45 0.003687037 0.150636019 0.098217534 -3 -1 -2 0.2 dme-bantam-3p 7mer-m8 TGATCTC X 10077302 10077308 - X_10077302_10077308_- 0.66160692 0.661611988 0.661609454 3.61E-06 ZAP3 FBtr0308584 10077004 10077349 X - 10077244 10077335 5'utr ZAP3 FlyBase G66210.1 GGCAGCAGCAGCGCAGGACCTGATCTTTGATCTCTGAACTCTGAACTCTGAACTCTGAACTCTGAACTCTGAACTCTGAACTCTGAACTCTG 90 10077301 0.988264536 8 82 753 0.902912621 1.366422957 0.233009709 0.133333333 0.242718447 90 7 3 93 X:10077244-10077335 7 ZAP3 FBtr0308584 10077004 10077349 TGATCTC 7mer-m8 dme-bantam-3p X - 10077278 10077335 5'utr ZAP3 FlyBase G49842.1 GGCAGCAGCAGCGCAGGACCTGATCTTTGATCTCTGAACTCTGAACTCTGAACTCTGA 70 10077301 0.986149418 6 66 555 0.944444444 1.309630167 0.175925926 0.4 0.611111111 70 2 4 102 X:10077278-10077335 7 79 3073 FBgn0052685 2208 46.58 71.55666667 0.035778986 1.69600687 1.104020124 -7 -7 -7 0.2 dme-miR-14-3p 6mer3-8 AAGACT X 10264306 10264311 - X_10264306_10264311_- 0.999926693 0.996480444 0.998203569 0.002436902 CG12643 FBtr0071481 10264231 10264840 X - 10264283 10264332 3'utr CG12643 FlyBase G66241.1 TTTAATTTGTATTTAGAGCTAAAGACTACAGTTTATACATTTTATGAATT 22 10264313 0.844661757 7 20 173 0.884615385 1.361727836 0.230769231 0.181818182 0.307692308 22 3 0 23 X:10264283-10264332 6 CG12643 FBtr0071481 10264231 10264840 AAGACT 6mer3-8 dme-miR-14-3p X - 10264282 10264337 3'utr CG12643 FlyBase G49865.1 ACGTATTTAATTTGTATTTAGAGCTAAAGACTACAGTTTATACATTTTATGAATTT 14 10264322 0.82261246 7 13 146 0.9 1.255272505 0.15 0.428571429 0.6 14 2 0 18 X:10264282-10264337 6 17 3074 FBgn0040942 927.6666667 110.47 167.3433333 0.018325548 0.153887933 0.101587555 2 11 6.5 0.2 dme-miR-283-5p 8mer-A1 TGATATTA X 10277097 10277104 - X_10277097_10277104_- 0.570292624 0.564553165 0.567422894 0.004058369 alpha-Man-I FBtr0300512|FBtr0300514|FBtr0299633|FBtr0300513|FBtr0299632|FBtr0300516|FBtr0300515|FBtr0300511|FBtr0331759 10266790|10276053|10276053|10276053|10276616|10276053|10276053|10266790|10276616 10277555|10277555|10277555|10277555|10277555|10277555|10277555|10277555|10277555 X - 10277083 10277189 3'utr alpha-Man-I FlyBase G66252.1 AATCCAAATAGTTGACAGAGGTGGATGGTGGGAAGACCTCAATTTCCATTTAAATGCGAATGACGTAGACGTAGGCAAAAACTCTTGATATTAATTATGATATGATA 53 10277105 0.857335094 9 52 380 0.982758621 1.755874856 0.25862069 0.094339623 0.172413793 53 1 0 57 X:10277083-10277189 8 alpha-Man-I FBtr0300515|FBtr0331759|FBtr0300511|FBtr0299632|FBtr0300516|FBtr0299633|FBtr0300513|FBtr0300512|FBtr0300514 10276053|10276616|10266790|10276616|10276053|10276053|10276053|10266790|10276053 10277555|10277555|10277555|10277555|10277555|10277555|10277555|10277555|10277555 TGATATTA 8mer-A1 dme-miR-283-5p X - 10277086 10277131 3'utr alpha-Man-I FlyBase G49876.1 AATGACGTAGACGTAGGCAAAAACTCTTGATATTAATTATGATATG 21 10277105 0.752342287 5 21 144 1 1.579783597 0.131578947 0.666666667 0.815789474 21 0 0 38 X:10277086-10277131 8 27 3075 FBgn0259170 1144.146667 34.71333333 53.02333333 0.023598373 0.777799117 0.509209782 1 1 1 0.2 dme-bantam-3p 6mer3-8 TGATCT X 10357226 10357231 - X_10357226_10357231_- 0.998545592 0.999740563 0.999143078 0.000844993 l(1)G0289 FBtr0347009|FBtr0071470 10348678|10356827 10357744|10357744 X - 10357030 10357257 5'utr l(1)G0289 FlyBase G66273.2 GAAAGACGACTGGCAACAGCATGAAGTGATCTGTTAAATGTATCTTTTTACCTTTTTTACCGTACCGCCTGCCCATTAGAAGAAAAGCAAAAAAGAGAGAGAGAAAAAAAATGTATAATAATAATGAATAATACCCCAGAAGACAACTCAACTATTGTATAACTCTGAGACCAACGGCTCCCACCAGGCCACGCACACATCCATACCTAAAGCACACACACACACACT 104 10357226 0.965407144 23 93 494 0.880952381 1.744292983 0.158730159 0.201923077 0.341269841 104 14 1 111 X:10357030-10357257 6 l(1)G0289 FBtr0071470|FBtr0347009 10356827|10348678 10357744|10357744 TGATCT 6mer3-8 dme-bantam-3p X - 10357204 10357257 5'utr l(1)G0289 FlyBase G49889.2 GAAAGACGACTGGCAACAGCATGAAGTGATCTGTTAAATGTATCTTTTTACCTT 36 10357226 0.646513221 8 33 224 0.966101695 1.755874856 0.152542373 0.472222222 0.677966102 36 2 0 57 X:10357204-10357257 6 40.5 3076 FBgn0028331 5573.983333 212.8733333 325.9566667 0.007265899 0.190253985 0.124249645 -5 -5 -5 0.2 dme-miR-304-5p 7mer-m8 TGAGATT X 10357396 10357402 - X_10357396_10357402_- 0.620202092 0.620169769 0.62018593 2.28E-05 l(1)G0289 FBtr0347009|FBtr0071470|FBtr0347008 10348678|10356827|10357355 10357744|10357744|10357744 X - 10357273 10357411 5'utr-coding l(1)G0289 FlyBase G66274.1 ACTGATTGTTGAGATTTAGCTCAGAACGCTGCCGAAACCGAACAAAACAACAACTAAAAAAAGAAATGAAAGCAATTTAGAAGTGTAAAGTATAGACACAGGACCTGAGTTCTTGACTCCCAGTCCCCCGGAACCAACT 20 10357382 0.959457343 13 19 86 0.909090909 1.301029996 0.045454545 0.1 0.181818182 20 2 0 20 X:10357273-10357411 7 l(1)G0289 FBtr0347008|FBtr0071470|FBtr0347009 10357355|10356827|10348678 10357744|10357744|10357744 TGAGATT 7mer-m8 dme-miR-304-5p X - 10357372 10357417 5'utr l(1)G0289 FlyBase G49891.1 TTTTGAACTGATTGTTGAGATTTAGCTCAGAACGCTGCCGAAACCG 7 10357403 0.948855179 4 7 55 1 0.903089987 0 0.142857143 0.25 7 0 0 8 X:10357372-10357417 7 5.5 3077 FBgn0028331 5573.983333 212.8733333 325.9566667 0.000986727 0.025836961 0.016873409 -20 1 -9.5 0.2 dme-miR-11-3p 7mer-m1 TGTGATG X 10357459 10357465 - X_10357459_10357465_- 0.552503262 0.601292393 0.576897827 0.034499103 l(1)G0289 FBtr0347009|FBtr0071470|FBtr0347008 10348678|10356827|10357355 10357744|10357744|10357744 X - 10357427 10357478 5'utr l(1)G0289 FlyBase G66275.1 ACCCGTCTGTAATTGTGATGTGTTCCATGATGCGTCCACAATGTCAACCAAA 13 10357466 0.986179769 5 12 101 1 1.176091259 0.133333333 0.153846154 0.266666667 13 0 0 15 X:10357427-10357478 7 l(1)G0289 FBtr0347008|FBtr0071470|FBtr0347009 10357355|10356827|10348678 10357744|10357744|10357744 TGTGATG 7mer-m1 dme-miR-11-3p X - 10357439 10357485 5'utr l(1)G0289 FlyBase G49892.1 ATTTGAAACCCGTCTGTAATTGTGATGTGTTCCATGATGCGTCCACA 12 10357466 0.977470675 7 10 88 0.75 1.079181246 0.3125 0.25 0.4375 12 4 0 12 X:10357439-10357485 7 10 3078 FBgn0028331 5573.983333 212.8733333 325.9566667 0.001794049 0.046976293 0.030678925 1 1 1 0.2 dme-miR-33-5p 7mer-A1 AATGCAA X 10463983 10463989 - X_10463983_10463989_- 0.78148387 0.764908951 0.77319641 0.011720224 nocte FBtr0071460|FBtr0332953|FBtr0307488|FBtr0071461 10463816|10461863|10463816|10463816 10464452|10464452|10464452|10464452 X - 10463934 10464009 3'utr nocte FlyBase G66293.1 AAACGAGTAAGGAATACCTAAATGCAAGAAGAAATATTTAACAAAAATGAACAGAATACAACACCATGCCACACCA 12 10463989 0.917418033 6 12 40 1 1.113943352 0.384615385 0.083333333 0.153846154 12 0 0 13 X:10463934-10464009 7 nocte FBtr0071461|FBtr0307488|FBtr0332953|FBtr0071460 10463816|10463816|10461863|10463816 10464452|10464452|10464452|10464452 AATGCAA 7mer-A1 dme-miR-33-5p X - 10463975 10464034 3'utr nocte FlyBase G49902.1 AAGACGAAAGTTAAGAATCAACAGGAAACGAGTAAGGAATACCTAAATGCAAGAAGAAAT 8 10463988 0.801798429 3 7 17 1 1.113943352 0.076923077 0.5 0.692307692 8 0 0 13 X:10463975-10464034 7 7.5 3079 FBgn0261710 3253.496667 44.13333333 68.01666667 0.002305212 0.169939577 0.110267091 0 -1 -0.5 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA X 10482440 10482447 - X_10482440_10482447_- 0.640539767 0.635644924 0.638092346 0.003461217 CG32687 FBtr0336901|FBtr0071458 10482026|10482026 10482859|10482859 X - 10482411 10482474 3'utr CG32687 FlyBase G66325.1 TGTTACTCACACACCTACACAATCTATACCAAAGAAACTCGACTGGCTTTCACTGGGCAAAAAC 44 10482448 0.952694666 7 37 173 0.851851852 0.963787827 0.018518519 0.181818182 0.333333333 44 4 4 46 X:10482411-10482474 8 CG32687 FBtr0071458|FBtr0336901 10482026|10482026 10482859|10482859 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X - 10482405 10482464 3'utr CG32687 FlyBase G49922.1 ACACCTACACAATCTATACCAAAGAAACTCGACTGGCTTTCACTGGGCAAAAACAAATAG 40 10482448 0.949922093 5 34 149 0.821428571 1.185636577 0 0.325 0.517857143 40 8 2 46 X:10482405-10482464 8 40 3080 FBgn0052687 315.3033333 16.03666667 24.44666667 0.126861964 2.494283933 1.63621489 1 1 1 0.2 dme-miR-317-3p 6mer3-8 TGTGTT X 10482485 10482490 - X_10482485_10482490_- 0.949930043 0.909186442 0.929558242 0.028810076 CG32687 FBtr0336901|FBtr0071458 10482026|10482026 10482859|10482859 X - 10482476 10482566 3'utr CG32687 FlyBase G66326.1 CACACGTTACCAATTTGAACTAGTTTGCTAAGTGATTACACGACCTGTTTGCTTGCTCGCCTTGCGTGCCAATTTCTGTGTTTCTGTTTGC 20 10482519 0.697209296 12 19 168 0.913043478 1.322219295 0.173913043 0.15 0.260869565 20 2 0 21 X:10482476-10482566 6 CG32687 FBtr0071458|FBtr0336901 10482026|10482026 10482859|10482859 TGTGTT 6mer3-8 dme-miR-317-3p X - 10482473 10482570 3'utr CG32687 FlyBase G49923.1 TCTTCACACGTTACCAATTTGAACTAGTTTGCTAAGTGATTACACGACCTGTTTGCTTGCTCGCCTTGCGTGCCAATTTCTGTGTTTCTGTTTGCTTG 21 10482493 0.890878522 15 19 185 0.891891892 0.916453949 0.378378378 0.619047619 0.783783784 21 1 3 33 X:10482473-10482570 6 5.5 3081 FBgn0052687 315.3033333 16.03666667 24.44666667 0.01744352 0.342964041 0.224979547 29 3 16 0.2 dme-miR-8-3p 7mer-m8 CAGTATT X 10490625 10490631 - X_10490625_10490631_- 0.642621325 0.643877623 0.643249474 0.000888338 spri FBtr0336902|FBtr0310293|FBtr0310296|FBtr0310292|FBtr0336903|FBtr0112690|FBtr0310295|FBtr0336904|FBtr0310438 10490067|10490345|10490345|10490345|10490067|10490067|10490345|10490345|10490345 10490817|10490817|10490817|10490817|10490817|10490817|10490817|10490817|10490817 X - 10490576 10491026 stop_codon spri FlyBase G66339.1 TGTGCCGCATCATTGCGCACAAGGCGCGCATCACAAATCCGCAGGACTATGCGCTCTTTAAGCTGGTCGATGGCGAGGAGACGCTGCTGACGGACGCAGAGTGTCCGCAGGATGCCCGATTGGCGGCCAAGGGAAAGCATTGCATGCTGGCCTACAAGCGGATCGATGCCAAGATCGCCTGGCCGACCGCCCAGCTGGCAGGACACTGAATCATCAGCTCGGGGATGCACCCGATGCAAATATACGACATACCGCCCCGCCCGCTCTGCCCTTCTTGCTCACTAACCAAGCATATTTGATTAATAATTTATTATTATTACATTAAAATATACTTAGTAGCCTGTAAGTAAAGCTAATTAATGCTAATTAGAAAACATCTAATGTGTACTAAACATCAGTATTGAGTTAAGTGTGTTTTTTTTTCCTGACCCACGGGTCAAGCCCCCTTTTT 466 10490632 0.97491484 64 448 2790 0.961538462 2.021189299 0.166666667 0.135193133 0.261904762 466 17 4 525 X:10490576-10491026 7 spri FBtr0336903|FBtr0112690|FBtr0336904|FBtr0310295|FBtr0310438|FBtr0336902|FBtr0310293|FBtr0310296|FBtr0310292 10490067|10490067|10490345|10490345|10490345|10490067|10490345|10490345|10490345 10490817|10490817|10490817|10490817|10490817|10490817|10490817|10490817|10490817 CAGTATT 7mer-m8 dme-miR-8-3p X - 10490611 10490860 stop_codon spri FlyBase G49934.2 TGCCAAGATCGCCTGGCCGACCGCCCAGCTGGCAGGACACTGAATCATCAGCTCGGGGATGCACCCGATGCAAATATACGACATACCGCCCCGCCCGCTCTGCCCTTCTTGCTCACTAACCAAGCATATTTGATTAATAATTTATTATTATTACATTAAAATATACTTAGTAGCCTGTAAGTAAAGCTAATTAATGCTAATTAGAAAACATCTAATGTGTACTAAACATCAGTATTGAGTTAAGTGTGTT 280 10490632 0.928461665 40 255 1741 0.919047619 1.8876173 0.164285714 0.371428571 0.580952381 280 30 4 386 X:10490611-10490860 7 129 3082 FBgn0085443 1112.173333 25.35666667 38.71333333 0.115989114 5.087419482 3.332185294 1 1 1 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT X 10713644 10713650 - X_10713644_10713650_- 0.657204662 0.657492401 0.657348532 0.000203435 CG32676 FBtr0071503|FBtr0333017 10713113|10711161 10714398|10714398 X - 10713538 10713680 3'utr CG32676 FlyBase G66374.1 ACACGATCACACACACACACACCTGGCTTTGGCAGCTTTATGTTATGTTTAACTTTAATAACCGACGGCGGGCTGAATGAAAATCTGCACCAGCGACTGCGATGTGGCGCTTTAACCTAATTTGCCTTAATAGAAAATCGTTT 137 10713651 0.984223356 17 126 1046 0.924528302 1.69019608 0.044025157 0.116788321 0.238993711 137 10 2 147 X:10713538-10713680 7 CG32676 FBtr0333017|FBtr0071503 10711161|10713113 10714398|10714398 GGCAGCT 7mer-m8 dme-miR-980-3p X - 10713625 10713678 3'utr CG32676 FlyBase G49965.1 ACGATCACACACACACACACCTGGCTTTGGCAGCTTTATGTTATGTTTAACTTT 75 10713651 0.691063469 8 73 588 0.971962617 2.017033339 0.018691589 0.36 0.551401869 75 3 0 104 X:10713625-10713678 7 89 3083 FBgn0052676 977.3866667 21.50333333 32.91666667 0.091059151 4.138893195 2.703797468 1 1 1 0.2 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA X 10748666 10748671 + X_10748666_10748671_+ 0.999919817 0.9999279 0.999923859 5.73E-06 ras FBtr0332294|FBtr0332294|FBtr0071494|FBtr0071494|FBtr0071495|FBtr0071495|FBtr0343043|FBtr0343043 10748202|10748202|10748202|10748202|10748202|10748202|10748202|10748202 10749097|10749097|10748806|10748806|10748806|10748806|10748806|10748806 X + 10748615 10748686 3'utr ras FlyBase G60294.1 CTTCAACTATTCGCTATATATATCTAAAGCGCAACGCGTTGGTTGGCCGCTTACTTATTTTGCACGCTATAT 13 10748657 0.989709099 7 12 119 0.928571429 0.812913357 0.357142857 0.076923077 0.142857143 13 0 1 13 X:10748615-10748686 6 ras FBtr0071495|FBtr0071495|FBtr0343043|FBtr0343043|FBtr0332294|FBtr0332294|FBtr0071494|FBtr0071494 10748202|10748202|10748202|10748202|10748202|10748202|10748202|10748202 10748806|10748806|10748806|10748806|10749097|10749097|10748806|10748806 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" X + 10748649 10748685 3'utr ras FlyBase G45573.1 CGCGTTGGTTGGCCGCTTACTTATTTTGCACGCTATA 8 10748666 0.892106905 4 7 64 0.9 0.954242509 0.1 0.25 0.4 8 1 0 9 X:10748649-10748685 6 8.5 3084 FBgn0003204 319.3466667 15.79333333 24.27333333 0.026616843 0.538201773 0.350178522 9 0 4.5 0.2 dme-miR-1003-3p 6mer3-8 ATGTGA X 10748781 10748786 + X_10748781_10748786_+ 0.999996459 0.999325072 0.999660765 0.000474751 ras FBtr0332294|FBtr0071494|FBtr0071495|FBtr0343043 10748202|10748202|10748202|10748202 10749097|10748806|10748806|10748806 X + 10748742 10748797 3'utr ras FlyBase G60295.1 AGCTAGCTTCAAGTTTTAAAACTCTGCCAAACTTATTAAATGTGAACTGAAACTAA 12 10748781 0.958213695 7 12 62 1 1.146128036 0 0.166666667 0.285714286 12 0 0 14 X:10748742-10748797 6 ras FBtr0071495|FBtr0343043|FBtr0332294|FBtr0071494 10748202|10748202|10748202|10748202 10748806|10748806|10749097|10748806 ATGTGA 6mer3-8 dme-miR-1003-3p X + 10748773 10748801 3'utr ras FlyBase G45574.1 CTTATTAAATGTGAACTGAAACTAACTGA 9 10748781 0.634579243 5 9 51 1 1.146128036 0 0.333333333 0.571428571 9 0 0 14 X:10748773-10748801 6 8 3085 FBgn0003204 319.3466667 15.79333333 24.27333333 0.025051146 0.506542845 0.329579786 0 0 0 0.2 dme-miR-92b-3p 6mer3-8 GTGCAA X 10760146 10760151 - X_10760146_10760151_- 0.921265697 0.913725873 0.917495785 0.005331444 Tango5 FBtr0071501|FBtr0346377|FBtr0071499|FBtr0334457|FBtr0071500|FBtr0300569 10760046|10760046|10760046|10760046|10760046|10760046 10760485|10760485|10760485|10760485|10760485|10760485 X - 10760123 10760177 3'utr Tango5 FlyBase G66397.1 TAGTCGCGACTAATGAAAAGCAAATTGTGCAAAAGACAAACCAGCCAGAGTAAGC 42 10760153 0.869114202 4 42 110 1 1.755874856 0.157894737 0.238095238 0.438596491 42 0 0 57 X:10760123-10760177 6 Tango5 FBtr0071500|FBtr0300569|FBtr0071499|FBtr0334457|FBtr0071501|FBtr0346377 10760046|10760046|10760046|10760046|10760046|10760046 10760485|10760485|10760485|10760485|10760485|10760485 GTGCAA 6mer3-8 dme-miR-92b-3p X - 10760126 10760238 3'utr Tango5 FlyBase G49976.1 CCTTAGCAATTTTCCGTGTGAGTTCGTTTAACTAAAGTAACGAAAGTGAGGGAGACGCAGCTAGTCGCGACTAATGAAAAGCAAATTGTGCAAAAGACAAACCAGCCAGAGTA 30 10760153 0.914245324 5 29 102 0.979166667 1.371067862 0.166666667 0.333333333 0.583333333 30 0 1 47 X:10760126-10760238 6 33.5 3086 FBgn0052675 1144.95 61.17 93.45 0.02925892 0.547654079 0.358480471 2 2 2 0.2 dme-bantam-3p 6mer3-8 TGATCT X 10760456 10760461 - X_10760456_10760461_- 0.999492274 0.999185338 0.999338806 0.000217082 Tango5 FBtr0071501|FBtr0346377|FBtr0071499|FBtr0334457|FBtr0071500|FBtr0300569 10760046|10760046|10760046|10760046|10760046|10760046 10760485|10760485|10760485|10760485|10760485|10760485 X - 10760301 10760481 3'utr Tango5 FlyBase G66399.1 TCAGTGGATCAGTCTTCTGTTGATCTTTTTCCCCAACCCTTGGTTTTCGTTTAAATTATTTTGTATATTGCGGCTTTCGCTCTTAGTCAAATGATGTATCTTATGTGAGTGTGTCGGCGAGAGAAAAGGAGACGGCGTGGAAGCCTGAGGAATTTACCATGTAGACTAGACTAGGGAAAAA 65 10760454 0.982050376 22 63 567 0.948717949 1.86923172 0.256410256 0.138461538 0.282051282 65 4 0 74 X:10760301-10760481 6 Tango5 FBtr0071500|FBtr0300569|FBtr0071499|FBtr0334457|FBtr0071501|FBtr0346377 10760046|10760046|10760046|10760046|10760046|10760046 10760485|10760485|10760485|10760485|10760485|10760485 TGATCT 6mer3-8 dme-bantam-3p X - 10760436 10760482 3'utr Tango5 FlyBase G49978.2 ATCAGTGGATCAGTCTTCTGTTGATCTTTTTCCCCAACCCTTGGTTT 26 10760461 0.6119772 7 23 280 0.875 1.243038049 0.05 0.461538462 0.65 26 4 1 35 X:10760436-10760482 6 27 3087 FBgn0052675 1144.95 61.17 93.45 0.023581816 0.44139284 0.288924559 -7 0 -3.5 0.2 dme-bantam-3p 6mer3-8 TGATCT X 10765283 10765288 - X_10765283_10765288_- 0.835162183 0.8391076 0.837134891 0.002789819 Atg8a FBtr0346376|FBtr0346375|FBtr0071498 10764876|10764876|10764876 10765457|10765457|10765457 X - 10765258 10765367 3'utr Atg8a FlyBase G66408.1 AGCTTACAATATGGACGGCGAGTTAGCTAAACGAATTGAGGAAAACCGCAGGAAATGCCACATGAAAAGAACTTGAAATTGATCTGATACGCAGGGCAACAAAAAAAATC 193 10765289 0.968635469 12 189 1051 0.982142857 1.865301426 0.138392857 0.139896373 0.258928571 193 2 2 220 X:10765258-10765367 6 Atg8a FBtr0071498|FBtr0346375|FBtr0346376 10764876|10764876|10764876 10765457|10765457|10765457 TGATCT 6mer3-8 dme-bantam-3p X - 10765263 10765383 3'utr Atg8a FlyBase G49986.1 TTGTGTTTAGCATGCAAGCTTACAATATGGACGGCGAGTTAGCTAAACGAATTGAGGAAAACCGCAGGAAATGCCACATGAAAAGAACTTGAAATTGATCTGATACGCAGGGCAACAAAAA 86 10765289 0.970000449 13 81 461 0.953125 1.609238576 0.15625 0.38372093 0.5859375 86 4 2 122 X:10765263-10765383 6 122 3088 FBgn0052672 2319.966667 259.7 395.21 0.052586962 0.469772815 0.308696642 1 1 1 0.2 dme-miR-252-5p 6mer3-8 GTACTT X 10771103 10771108 + X_10771103_10771108_+ 0.56792373 0.416297755 0.492110743 0.107215702 BTBD9 FBtr0071497|FBtr0334456 10771071|10771071 10771699|10772154 X + 10771079 10771140 3'utr BTBD9 FlyBase G60303.1 CGCCGCTGCGGCCGATAATGTTTTGTACTTGAAATACTCCTGTGGTCTGTTAGCTGTTAGTC 44 10771127 0.686486621 11 43 388 1 1.740362689 0.236363636 0.159090909 0.327272727 44 0 0 55 X:10771079-10771140 6 BTBD9 FBtr0334456|FBtr0071497 10771071|10771071 10772154|10771699 GTACTT 6mer3-8 dme-miR-252-5p X + 10771082 10771140 3'utr BTBD9 FlyBase G45580.1 CGCTGCGGCCGATAATGTTTTGTACTTGAAATACTCCTGTGGTCTGTTAGCTGTTAGTC 23 10771127 0.988184706 8 23 216 1 1.51851394 0.333333333 0.347826087 0.545454545 23 0 0 33 X:10771082-10771140 6 13 3089 FBgn0030228 130.9633333 5.32 8.203333333 0.099264425 2.443609023 1.584721658 -24 -24 -24 0.2 dme-miR-1008-3p 6mer3-8 AGCTGT X 10771130 10771135 + X_10771130_10771135_+ 0.861252586 0.909007933 0.88513026 0.033768096 BTBD9 FBtr0071497|FBtr0334456 10771071|10771071 10771699|10772154 X + 10771079 10771140 3'utr BTBD9 FlyBase G60303.1 CGCCGCTGCGGCCGATAATGTTTTGTACTTGAAATACTCCTGTGGTCTGTTAGCTGTTAGTC 44 10771127 0.686486621 11 43 388 1 1.740362689 0.236363636 0.159090909 0.327272727 44 0 0 55 X:10771079-10771140 6 BTBD9 FBtr0334456|FBtr0071497 10771071|10771071 10772154|10771699 AGCTGT 6mer3-8 dme-miR-1008-3p X + 10771082 10771140 3'utr BTBD9 FlyBase G45580.1 CGCTGCGGCCGATAATGTTTTGTACTTGAAATACTCCTGTGGTCTGTTAGCTGTTAGTC 23 10771127 0.988184706 8 23 216 1 1.51851394 0.333333333 0.347826087 0.545454545 23 0 0 33 X:10771082-10771140 6 15.5 3090 FBgn0030228 130.9633333 5.32 8.203333333 0.118353738 2.913533835 1.889475823 3 3 3 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 10771183 10771189 + X_10771183_10771189_+ 0.397081631 0.55339419 0.475237911 0.110529699 BTBD9 FBtr0071497|FBtr0334456 10771071|10771071 10771699|10772154 X + 10771149 10771230 3'utr BTBD9 FlyBase G60304.1 TAGTTATATTTTGCAGACCGTGCTGCTCTTGTTATCTAGTCCTTCCCAGTGCCCCAATGCTTGGTGGTTCCAAAACCTGTGC 92 10771191 0.753327288 17 85 889 0.91509434 1.50965048 0.103773585 0.152173913 0.264150943 92 7 2 97 X:10771149-10771230 7 BTBD9 FBtr0334456|FBtr0071497 10771071|10771071 10772154|10771699 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X + 10771158 10771281 3'utr BTBD9 FlyBase G45581.1 TTTGCAGACCGTGCTGCTCTTGTTATCTAGTCCTTCCCAGTGCCCCAATGCTTGGTGGTTCCAAAACCTGTGCATTGCATATTGGTTTTGCGTTATTACCTTCGTTATATACTATATGTATATA 72 10771191 0.742343001 16 63 716 0.903508772 2.012837225 0.254385965 0.361111111 0.596491228 72 11 0 103 X:10771158-10771281 7 62 3091 FBgn0030228 130.9633333 5.32 8.203333333 0.473414951 11.65413534 7.557903291 -8 -8 -8 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 10771321 10771326 + X_10771321_10771326_+ 0.999545974 0.99772576 0.998635867 0.001287076 BTBD9 FBtr0071497|FBtr0071497|FBtr0071497|FBtr0334456|FBtr0334456|FBtr0334456 10771071|10771071|10771071|10771071|10771071|10771071 10771699|10771699|10771699|10772154|10772154|10772154 X + 10771304 10771400 3'utr BTBD9 FlyBase G60306.1 TGTTTTTATAATTTTATTGTGATCCAAAAATAATTCCTTATGTTTGCAAGGCAGCAGAGTTATTTATATAAGCAATATAACTGAATTCTATGCACAC 31 10771319 0.98590632 14 31 258 1 1.591064607 0.025641026 0.193548387 0.358974359 31 0 0 39 X:10771304-10771400 6 BTBD9 FBtr0334456|FBtr0334456|FBtr0334456|FBtr0071497|FBtr0071497|FBtr0071497 10771071|10771071|10771071|10771071|10771071|10771071 10772154|10772154|10772154|10771699|10771699|10771699 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X + 10771309 10771349 3'utr BTBD9 FlyBase G45582.1 TTATAATTTTATTGTGATCCAAAAATAATTCCTTATGTTTG 21 10771320 0.971924366 5 19 169 0.846153846 0.643452676 0.038461538 0.238095238 0.384615385 21 0 4 22 X:10771309-10771349 6 20.5 3092 FBgn0030228 130.9633333 5.32 8.203333333 0.156532363 3.853383459 2.498984153 2 1 1.5 0.2 dme-miR-970-3p 6mer2-7 CTTATG X 10771544 10771549 + X_10771544_10771549_+ 0.985794856 0.999973488 0.992884172 0.010025784 BTBD9 FBtr0071497|FBtr0334456 10771071|10771071 10771699|10772154 X + 10771460 10771567 3'utr BTBD9 FlyBase G60307.1 GCGAACTCGAATGCGATTTCCGAGCAGCTGAACCAAAATTGTATACGATATCCGATCGCATAGTATAAATCTGTACTGTCTAGCCTTATGTCCGGTCCATGTCCTTGT 18 10771550 0.97930014 12 18 122 1 1.342422681 0.181818182 0.222222222 0.363636364 18 0 0 22 X:10771460-10771567 6 BTBD9 FBtr0334456|FBtr0071497 10771071|10771071 10772154|10771699 CTTATG 6mer2-7 dme-miR-970-3p X + 10771510 10771564 3'utr BTBD9 FlyBase G45584.1 TCCGATCGCATAGTATAAATCTGTACTGTCTAGCCTTATGTCCGGTCCATGTCCT 12 10771549 0.738930404 6 9 92 0.8125 0.812913357 0.25 0.25 0.4375 12 2 1 13 X:10771510-10771564 6 8.5 3093 FBgn0030228 130.9633333 5.32 8.203333333 0.064903663 1.597744361 1.036164161 -6 -5 -5.5 0.2 dme-bantam-3p 6mer3-8 TGATCT X 10781452 10781457 - X_10781452_10781457_- 0.969953232 0.965855168 0.9679042 0.002897724 sesB FBtr0346384|FBtr0073423|FBtr0073422|FBtr0073421|FBtr0073424 10780991|10780991|10780991|10780991|10780891 10781620|10781620|10781620|10781620|10781620 X - 10781421 10781490 5'utr sesB FlyBase G66417.1 AGCAATAGCAACAGCAAAGGCATAAGCTAAGTTTGATCTGCAACCAACACCTCTTACCACGAACAACGGC 77 10781458 0.970164408 7 70 427 0.920454545 1.431363764 0.125 0.116883117 0.227272727 77 5 2 81 X:10781421-10781490 6 sesB FBtr0073424|FBtr0346384|FBtr0073423|FBtr0073422|FBtr0073421 10780891|10780991|10780991|10780991|10780991 10781620|10781620|10781620|10781620|10781620 TGATCT 6mer3-8 dme-bantam-3p X - 10781425 10781479 5'utr sesB FlyBase G49996.1 CAGCAAAGGCATAAGCTAAGTTTGATCTGCAACCAACACCTCTTACCACGAACAA 21 10781457 0.910193931 6 21 118 1 1.602059991 0.025 0.476190476 0.725 21 0 0 40 X:10781425-10781479 6 46.5 3094 FBgn0003360 11391.58667 829.71 1277.313333 0.00408196 0.056043678 0.036404537 1 0 0.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 10789827 10789833 - X_10789827_10789833_- 0.680701113 0.663727834 0.672214474 0.012001936 Imp FBtr0073414|FBtr0073414|FBtr0073414 10787867|10787867|10787867 10797068|10797068|10797068 X - 10789758 10789879 3'utr Imp FlyBase G66431.1 AATCAGACCTCCCCCCTTCTCACTTCTCCAGCGCCTGGTTTGCCTGTGTGATAGTAGTTTATAATTAAAACCATCCGCTGGGCACCCAACTCCCCTCATGGGACCTTAAGCAGTCCCCCCCC 295 10789835 0.989768634 24 281 2760 0.955621302 1.810232518 0.056213018 0.13220339 0.24260355 295 11 4 323 X:10789758-10789879 7 Imp FBtr0073414|FBtr0073414|FBtr0073414 10787867|10787867|10787867 10797068|10797068|10797068 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 10789773 10789878 3'utr Imp FlyBase G50009.1 ATCAGACCTCCCCCCTTCTCACTTCTCCAGCGCCTGGTTTGCCTGTGTGATAGTAGTTTATAATTAAAACCATCCGCTGGGCACCCAACTCCCCTCATGGGACCTT 211 10789835 0.840990894 17 195 2016 0.945619335 1.650446298 0.039274924 0.421800948 0.63141994 211 12 6 313 X:10789773-10789878 7 223.5 3095 FBgn0262735 4183.533333 61.35 94.29666667 0.053423741 3.643031785 2.370179222 2 2 2 0.2 dme-miR-14-3p 7mer-A1 AGACTGA X 10790375 10790381 - X_10790375_10790381_- 0.823127466 0.823071599 0.823099533 3.95E-05 Imp FBtr0073414 10787867 10797068 X - 10790300 10790418 3'utr Imp FlyBase G66434.1 TTCGATTTGTAATAGATTATATACGGTAATCAACTGGAGACTGAGCTACAACATATATTTAGTTACCGTTATATTTATTGCAGAGACACACACACATACATACACTAACACCAACCCCA 745 10790385 0.972319165 25 680 3989 0.913142857 1.94830427 0.138285714 0.139597315 0.267428571 745 68 8 799 X:10790300-10790418 7 Imp FBtr0073414 10787867 10797068 AGACTGA 7mer-A1 dme-miR-14-3p X - 10790333 10790415 3'utr Imp FlyBase G50014.1 GATTTGTAATAGATTATATACGGTAATCAACTGGAGACTGAGCTACAACATATATTTAGTTACCGTTATATTTATTGCAGAGA 546 10790385 0.718578684 21 493 2844 0.923255814 1.945577993 0.197674419 0.41025641 0.625581395 546 58 8 794 X:10790333-10790415 7 555.5 3096 FBgn0262735 4183.533333 61.35 94.29666667 0.132782496 9.054604727 5.890982361 4 4 4 0.2 dme-miR-277-3p 6mer3-8 TGCATT X 10790655 10790660 - X_10790655_10790660_- 0.77752096 0.574517294 0.676019127 0.143545293 Imp FBtr0073414 10787867 10797068 X - 10790635 10790691 3'utr Imp FlyBase G66436.1 AATGCATTAAAATGTTGTATGATGTAGACTATGCATTGGAACGAAACGAAACGAAAC 38 10790667 0.98417967 5 37 292 1 1.672097858 0.425531915 0.189189189 0.361702128 37 0 0 47 X:10790635-10790691 6 Imp FBtr0073414 10787867 10797068 TGCATT 6mer3-8 dme-miR-277-3p X - 10790643 10790728 3'utr Imp FlyBase G50016.1 ATATTGTATATGTACAATAGCAACAACGCAACATCAAAATGCATTAAAATGTTGTATGATGTAGACTATGCATTGGAACGAAACGA 20 10790667 0.980208271 6 20 141 1 1.462397998 0.137931034 0.45 0.620689655 20 0 0 29 X:10790643-10790728 6 26.5 3097 FBgn0262735 4183.533333 61.35 94.29666667 0.006334359 0.43194784 0.281027961 7 7 7 0.2 dme-miR-263a-5p 6mer3-8 GTGCCA X 10792594 10792599 - X_10792594_10792599_- 0.937001096 0.953404339 0.945202717 0.011598814 Imp FBtr0073418|FBtr0073416|FBtr0073414 10792506|10790803|10787867 10797068|10797068|10797068 X - 10792551 10792631 3'utr Imp FlyBase G66439.1 AATGAGAAAAGTACTTTTTTGTGTTGTAAGTTGTGCCAAGTACTGATAACGTTTAAGGTGTGATAAACTCGTTTTTAAATT 36 10792600 0.850214232 12 35 287 0.97826087 1.653212514 0.130434783 0.277777778 0.434782609 36 1 0 45 X:10792551-10792631 6 Imp FBtr0073416|FBtr0073414|FBtr0073418 10790803|10787867|10792506 10797068|10797068|10797068 GTGCCA 6mer3-8 dme-miR-263a-5p X - 10792539 10792623 3'utr Imp FlyBase G50020.1 AAGTACTTTTTTGTGTTGTAAGTTGTGCCAAGTACTGATAACGTTTAAGGTGTGATAAACTCGTTTTTAAATTTAACAACTATTT 34 10792591 0.983330066 10 32 259 0.94 1.672097858 0.34 0.352941176 0.56 34 3 0 47 X:10792539-10792623 6 25 3098 FBgn0262735 4183.533333 61.35 94.29666667 0.00597581 0.407497963 0.265120718 1 -8 -3.5 0.2 dme-miR-282-5p 8mer-A1 AGAGGCTA X 10793075 10793082 - X_10793075_10793082_- 0.637867865 0.637861075 0.63786447 4.81E-06 Imp FBtr0073418|FBtr0073416|FBtr0073414 10792506|10790803|10787867 10797068|10797068|10797068 X - 10793016 10793165 3'utr Imp FlyBase G66440.1 AGAGAACTCAGTTTGAAGAACGAAGAAAGAAAAGCGATTGTGAGTTGTGTGAAAAGCAGAAACGAAATTATTTTTTAGTATTTAGAGGCTATTTTATATCGTTATTAAAGCAGGTAGGCAAGTGAGGCAACGGTTAGGAAAAAAAGGAAG 235 10793083 0.984308871 24 222 1734 0.949090909 2.416640507 0.141818182 0.157446809 0.28 235 14 0 261 X:10793016-10793165 8 Imp FBtr0073416|FBtr0073414|FBtr0073418 10790803|10787867|10792506 10797068|10797068|10797068 AGAGGCTA 8mer-A1 dme-miR-282-5p X - 10793013 10793184 3'utr Imp FlyBase G50021.1 TAATGATAATGATGTAGAAAGAGAACTCAGTTTGAAGAACGAAGAAAGAAAAGCGATTGTGAGTTGTGTGAAAAGCAGAAACGAAATTATTTTTTAGTATTTAGAGGCTATTTTATATCGTTATTAAAGCAGGTAGGCAAGTGAGGCAACGGTTAGGAAAAAAAGGAAGTGA 196 10793083 0.987128278 29 181 1389 0.928082192 1.955848036 0.157534247 0.336734694 0.554794521 196 19 2 271 X:10793013-10793184 8 82.5 3099 FBgn0262735 4183.533333 61.35 94.29666667 0.019720173 1.344743276 0.87489837 1 1 1 0.2 dme-miR-307a-3p 6mer2-7 GTTGTG X 10793117 10793122 - X_10793117_10793122_- 0.768303638 0.97446461 0.871384124 0.145777841 Imp FBtr0073418|FBtr0073416|FBtr0073414 10792506|10790803|10787867 10797068|10797068|10797068 X - 10793016 10793165 3'utr Imp FlyBase G66440.1 AGAGAACTCAGTTTGAAGAACGAAGAAAGAAAAGCGATTGTGAGTTGTGTGAAAAGCAGAAACGAAATTATTTTTTAGTATTTAGAGGCTATTTTATATCGTTATTAAAGCAGGTAGGCAAGTGAGGCAACGGTTAGGAAAAAAAGGAAG 235 10793122 0.984308871 24 222 1734 0.949090909 2.416640507 0.141818182 0.157446809 0.28 235 14 0 261 X:10793016-10793165 6 Imp FBtr0073416|FBtr0073414|FBtr0073418 10790803|10787867|10792506 10797068|10797068|10797068 GTTGTG 6mer2-7 dme-miR-307a-3p X - 10793013 10793184 3'utr Imp FlyBase G50021.1 TAATGATAATGATGTAGAAAGAGAACTCAGTTTGAAGAACGAAGAAAGAAAAGCGATTGTGAGTTGTGTGAAAAGCAGAAACGAAATTATTTTTTAGTATTTAGAGGCTATTTTATATCGTTATTAAAGCAGGTAGGCAAGTGAGGCAACGGTTAGGAAAAAAAGGAAGTGA 196 10793121 0.987128278 29 181 1389 0.928082192 1.955848036 0.157534247 0.336734694 0.554794521 196 19 2 271 X:10793013-10793184 6 72 3100 FBgn0262735 4183.533333 61.35 94.29666667 0.017210333 1.173594132 0.763547669 0 -1 -0.5 0.2 dme-miR-1003-3p 6mer2-7 TGTGAG X 10793222 10793227 - X_10793222_10793227_- 0.539080492 0.915780285 0.727430389 0.266366983 Imp FBtr0073418|FBtr0073416|FBtr0073414 10792506|10790803|10787867 10797068|10797068|10797068 X - 10793198 10793266 3'utr Imp FlyBase G66441.1 ATAAATGAGGATAAAGATCGAGGTAACAACTAAAAAACTTGTGAGTTAGCGTGCGCGTTAAAAACGAAA 14 10793221 0.973597046 5 14 80 1 1.146128036 0.071428571 0 0 14 0 0 14 X:10793198-10793266 6 Imp FBtr0073416|FBtr0073414|FBtr0073418 10790803|10787867|10792506 10797068|10797068|10797068 TGTGAG 6mer2-7 dme-miR-1003-3p X - 10793203 10793260 3'utr Imp FlyBase G50022.1 GAGGATAAAGATCGAGGTAACAACTAAAAAACTTGTGAGTTAGCGTGCGCGTTAAAAA 14 10793221 0.969164241 4 14 73 1 1.380211242 0.208333333 0.357142857 0.625 14 0 0 24 X:10793203-10793260 6 12 3101 FBgn0262735 4183.533333 61.35 94.29666667 0.002868389 0.195599022 0.127257945 -6 -6 -6 0.2 dme-bantam-3p 6mer3-8 TGATCT X 10793754 10793759 - X_10793754_10793759_- 0.943931613 0.950882526 0.94740707 0.004915029 Imp FBtr0073418|FBtr0073416|FBtr0073414 10792506|10790803|10787867 10797068|10797068|10797068 X - 10793746 10793784 3'utr Imp FlyBase G66442.1 AAGAATGTTGCTGGGCATTTACCATTGATCTTTATATAC 10 10793760 0.612909663 4 7 108 0.75 0.954242509 0.25 0.2 0.333333333 10 3 0 9 X:10793746-10793784 6 Imp FBtr0073416|FBtr0073414|FBtr0073418 10790803|10787867|10792506 10797068|10797068|10797068 TGATCT 6mer3-8 dme-bantam-3p X - 10793740 10793781 3'utr Imp FlyBase G50024.1 AATGTTGCTGGGCATTTACCATTGATCTTTATATACGAGTAT 7 10793760 0.751734379 4 7 78 1 0.954242509 0.222222222 0.285714286 0.444444444 7 0 0 9 X:10793740-10793781 6 8 3102 FBgn0262735 4183.533333 61.35 94.29666667 0.001912259 0.130399348 0.08483863 1 1 1 0.2 dme-miR-276a-3p 6mer3-8 AGTTCC X 10833255 10833260 - X_10833255_10833260_- 0.877764748 0.761397598 0.819581173 0.082283966 sbr FBtr0073411 10832750 10833508 X - 10833234 10833286 3'utr sbr FlyBase G66468.1 TCGATAGATTAGTTTAGCTCTCTTTAAGTTCCGTCCGCAGATCCGCTGGTCTA 10 10833258 0.775412459 4 10 84 1 1.079181246 0.083333333 0.2 0.333333333 10 0 0 12 X:10833234-10833286 6 sbr FBtr0073411 10832750 10833508 AGTTCC 6mer3-8 dme-miR-276a-3p X - 10833235 10833316 3'utr sbr FlyBase G50045.1 CGGGCAATGTGCATCAACGATCACAGTTCTTCGATAGATTAGTTTAGCTCTCTTTAAGTTCCGTCCGCAGATCCGCTGGTCT 11 10833258 0.987117343 5 9 75 0.8 1.079181246 0.133333333 0.272727273 0.466666667 11 3 0 12 X:10833235-10833316 6 7.5 3103 FBgn0003321 977.3433333 36.05 55.19 0.007673864 0.208044383 0.135894184 -2 -2 -2 0.2 dme-miR-79-3p 8mer-A1 TAGCTTTA X 10862879 10862886 + X_10862879_10862886_+ 0.624522828 0.624995322 0.624759075 0.000334108 CG2186 FBtr0073381|FBtr0332961 10862782|10862782 10863580|10866246 X + 10862817 10862980 3'utr CG2186 FlyBase G60340.1 TATAACTATTATCGATTATAGATGTACGACGATGATGGGGAGTAGTGCAGTAAGCAGTACTTTAGCTTTAAGGTAAAAAGTTATAAATAGTTGAGCTTTCTTTATAAATAGCGGATTATACATATATCTAGATGTCATGTAATTGGTGGGTGTGCGTGAGGGTC 22 10862878 0.98390638 12 21 179 0.966666667 1.161368002 0.1 0.272727273 0.466666667 22 0 1 29 X:10862817-10862980 8 CG2186 FBtr0073381|FBtr0332961 10862782|10862782 10863580|10866246 TAGCTTTA 8mer-A1 dme-miR-79-3p X + 10862810 10862944 3'utr CG2186 FlyBase G45607.1 AGTTTTCTATAACTATTATCGATTATAGATGTACGACGATGATGGGGAGTAGTGCAGTAAGCAGTACTTTAGCTTTAAGGTAAAAAGTTATAAATAGTTGAGCTTTCTTTATAAATAGCGGATTATACATATATC 27 10862878 0.993591984 11 26 200 1 1.643452676 0.386363636 0.481481481 0.681818182 27 0 0 44 X:10862810-10862944 8 10 3104 FBgn0030243 1064.863333 20.89333333 32.09 0.009390876 0.47862157 0.311623559 1 1 1 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC X 10863491 10863497 + X_10863491_10863497_+ 0.632634012 0.634733607 0.633683809 0.001484641 CG2186 FBtr0073381|FBtr0332961 10862782|10862782 10863580|10866246 X + 10863438 10863545 3'utr CG2186 FlyBase G60345.1 ATTTTATACATTGTGCCCCGTTGATTGTAAATGAAATTTATTGTCTGTCCTGTTGTGTTCTTTGTAACTACTATAAACCACATACGAAACTATGTTAGCTTGTGAACT 88 10863490 0.790500796 16 87 1048 0.99047619 2.017033339 0.295238095 0.113636364 0.257142857 88 1 0 104 X:10863438-10863545 7 CG2186 FBtr0073381|FBtr0332961 10862782|10862782 10863580|10866246 TGTGTTC 7mer-m8 dme-miR-317-3p X + 10863443 10863512 3'utr CG2186 FlyBase G45611.1 ATACATTGTGCCCCGTTGATTGTAAATGAAATTTATTGTCTGTCCTGTTGTGTTCTTTGTAACTACTATA 49 10863490 0.992978706 6 49 582 1 1.838849091 0.231884058 0.285714286 0.492753623 49 0 0 69 X:10863443-10863512 7 61 3105 FBgn0030243 1064.863333 20.89333333 32.09 0.057284346 2.919591576 1.900903708 1 1 1 0.2 dme-miR-304-5p 6mer2-7 GAGATT X 10864011 10864016 + X_10864011_10864016_+ 0.998505099 0.989240987 0.993873043 0.006550708 CG2186 FBtr0332961 10862782 10866246 X + 10863981 10864040 3'utr CG2186 FlyBase G60349.1 TCGAAGATAATGCGAAATGCCTAGACTAAAGAGATTGTTAAATTATTGCCACTCCCGCTC 7 10864017 0.986355677 5 5 40 0.75 0.77815125 0.25 0.142857143 0.25 7 2 0 6 X:10863981-10864040 6 CG2186 FBtr0332961 10862782 10866246 GAGATT 6mer2-7 dme-miR-304-5p X + 10863978 10864037 3'utr CG2186 FlyBase G45613.1 GCGTCGAAGATAATGCGAAATGCCTAGACTAAAGAGATTGTTAAATTATTGCCACTCCCG 8 10864017 0.971664377 4 6 41 0.933333333 1.146128036 0.466666667 0.625 0.8 8 1 0 14 X:10863978-10864037 6 5.5 3106 FBgn0030243 1064.863333 20.89333333 32.09 0.005164982 0.263241863 0.171392957 -6 -6 -6 0.2 dme-miR-79-3p 7mer-m8 TAGCTTT X 10864685 10864691 + X_10864685_10864691_+ 0.61450649 0.616645353 0.615575921 0.001512431 CG2186 FBtr0332961 10862782 10866246 X + 10864577 10864735 3'utr CG2186 FlyBase G60353.1 AATATGATATAATATATGGATTAATAAAAACCAATTATACCACGTGCACACATAAAAGCGTGCGGCAGCATAACTGTATAAACATCTAAAAATTATTCCAAGTGATTTTAGCTTTTTAAGAACCAAGTCGAAACAAACTGAACACTCGTAGTGGAAAAC 56 10864683 0.989285765 14 56 530 1 1.819543936 0.151515152 0.160714286 0.287878788 56 0 0 66 X:10864577-10864735 7 CG2186 FBtr0332961 10862782 10866246 TAGCTTT 7mer-m8 dme-miR-79-3p X + 10864661 10864735 3'utr CG2186 FlyBase G45616.1 TCTAAAAATTATTCCAAGTGATTTTAGCTTTTTAAGAACCAAGTCGAAACAAACTGAACACTCGTAGTGGAAAAC 37 10864683 0.99987835 6 35 353 0.944444444 1.707570176 0.12962963 0.378378378 0.574074074 37 3 0 51 X:10864661-10864735 7 38 3107 FBgn0030243 1064.863333 20.89333333 32.09 0.035685331 1.818761966 1.184169523 2 2 2 0.2 dme-miR-308-3p 8mer-m1 CTGTGATT X 10864799 10864806 + X_10864799_10864806_+ 0.385453086 0.385553101 0.385503093 7.07E-05 CG2186 FBtr0332961 10862782 10866246 X + 10864760 10864823 3'utr CG2186 FlyBase G60354.1 AAACAAAAATTGAAATGATTCCAATTTGCAAATCCGAGTCTGTGATTATTTTTATATTATTCTT 44 10864798 0.988869372 12 44 416 1 1.763427994 0 0.25 0.431034483 44 0 0 58 X:10864760-10864823 8 CG2186 FBtr0332961 10862782 10866246 CTGTGATT 8mer-m1 dme-miR-308-3p X + 10864776 10864815 3'utr CG2186 FlyBase G45617.1 GATTCCAATTTGCAAATCCGAGTCTGTGATTATTTTTATA 32 10864798 0.75912235 10 29 304 0.872340426 1.311753861 0 0.28125 0.510638298 32 5 1 41 X:10864776-10864815 8 36 3108 FBgn0030243 1064.863333 20.89333333 32.09 0.033807155 1.723037652 1.121844811 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 10865093 10865099 + X_10865093_10865099_+ 0.760101289 0.777677059 0.768889174 0.012427967 CG2186 FBtr0332961|FBtr0332961|FBtr0332961 10862782|10862782|10862782 10866246|10866246|10866246 X + 10865055 10865119 3'utr CG2186 FlyBase G60355.1 TCAAATAGATTAGATTACTTGGGGATTCGTCATTTATGTGTGATATACCATATATATGTATAGTT 36 10865091 0.989506363 6 29 394 0.80952381 1.531478917 0.047619048 0.138888889 0.261904762 36 8 0 34 X:10865055-10865119 7 CG2186 FBtr0332961|FBtr0332961|FBtr0332961 10862782|10862782|10862782 10866246|10866246|10866246 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X + 10865016 10865113 3'utr CG2186 FlyBase G45618.1 AAATCGGTTTGCGATCAGGCTCCAACGCTCCATTCTCAGTCAAATAGATTAGATTACTTGGGGATTCGTCATTTATGTGTGATATACCATATATATGT 22 10865090 0.989701717 7 21 206 0.96969697 1.505149978 0.03030303 0.272727273 0.515151515 22 1 0 32 X:10865016-10865113 7 26.5 3109 FBgn0030243 1064.863333 20.89333333 32.09 0.024885823 1.26834716 0.825802431 2 3 2.5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 10865385 10865390 + X_10865385_10865390_+ 0.725790897 0.733210303 0.7295006 0.005246308 CG2186 FBtr0332961 10862782 10866246 X + 10865295 10865412 3'utr CG2186 FlyBase G60356.1 ATCGCCAATACATTTTACCTGTGTATAGTGTATAGTTAAGAACCGACTAGCAGAAATGCAAACACTATTCGATGTTAGTTATCTATATATGTACCTAGAAAGTTACTCTCTATGTGTG 54 10865384 0.946230999 11 49 461 0.921875 1.293730757 0.15625 0.185185185 0.3125 54 3 2 59 X:10865295-10865412 6 CG2186 FBtr0332961 10862782 10866246 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X + 10865361 10865403 3'utr CG2186 FlyBase G45621.1 ATTCGATGTTAGTTATCTATATATGTACCTAGAAAGTTACTCT 25 10865384 0.790406837 4 25 229 1 1.579783597 0.210526316 0.44 0.631578947 25 0 0 38 X:10865361-10865403 6 28 3110 FBgn0030243 1064.863333 20.89333333 32.09 0.026294454 1.340140396 0.872545964 1 1 1 0.2 dme-miR-252-5p 6mer3-8 GTACTT X 10874076 10874081 - X_10874076_10874081_- 0.582627341 0.673181564 0.627904453 0.06403156 CG1637 FBtr0339836|FBtr0073406 10873898|10873898 10874473|10874473 X - 10874057 10874094 3'utr CG1637 FlyBase G66509.1 ATGTGTATGGGATGTACTTGATATACTTATTAGGATCA 18 10874082 0.839540507 4 17 167 0.958333333 1.361727836 0.291666667 0.222222222 0.416666667 18 1 0 23 X:10874057-10874094 6 CG1637 FBtr0339836|FBtr0073406 10873898|10873898 10874473|10874473 GTACTT 6mer3-8 dme-miR-252-5p X - 10874058 10874091 3'utr CG1637 FlyBase G50078.1 TGTATGGGATGTACTTGATATACTTATTAGGATC 8 10874082 0.815908866 4 8 79 1 1.041392685 0.181818182 0.375 0.545454545 8 0 0 11 X:10874058-10874091 6 13 3111 FBgn0030245 450.3333333 29.93666667 45.6 0.028867506 0.434250084 0.285087719 1 1 1 0.2 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 11094392 11094399 + X_11094392_11094399_+ 0.630936438 0.630936 0.630936219 2.83E-07 CG2061 FBtr0073429|FBtr0332383|FBtr0073431 11094303|11094303|11094303 11094660|11094947|11094660 X + 11094366 11094448 3'utr CG2061 FlyBase G60372.1 TCGAATCAGGGAGAGTTATCATCATTTCTAGTCACTTGTTTGCCGATTTTTCTCTCATTGTTGCCTTTGCGTTCACCCAGCGA 209 11094391 0.794624299 12 200 2075 0.958174905 1.799340549 0.406844106 0.220095694 0.380228137 209 8 3 252 X:11094366-11094448 8 CG2061 FBtr0073431|FBtr0073429|FBtr0332383 11094303|11094303|11094303 11094660|11094660|11094947 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X + 11094366 11094414 3'utr CG2061 FlyBase G45629.1 TCGAATCAGGGAGAGTTATCATCATTTCTAGTCACTTGTTTGCCGATTT 126 11094391 0.961042815 6 123 1220 0.97740113 2.238046103 0.463276836 0.349206349 0.536723164 126 4 0 173 X:11094366-11094414 8 164 3112 FBgn0027498 98.96 5.68 8.753333333 1.657235247 28.87323944 18.73571973 1 1 1 0.2 dme-miR-2a-2-5p 8mer-A1 TGATGAGA X 11111872 11111879 + X_11111872_11111879_+ 0.600469618 0.60085853 0.600664074 0.000274994 Hsp60 FBtr0073434|FBtr0073435 11111824|11111824 11112308|11112308 X + 11111831 11111914 3'utr Hsp60 FlyBase G60388.1 TGCCACTGACTGGTCGACAGCCGGAGAGGGGGAGGGAGATGTGATGAGAACCGAAACCAGCATACTGTTTAAGTCACGATGTGG 64 11111875 0.887892394 7 60 171 0.941176471 1.329058719 0.25 0.0625 0.117647059 64 2 2 64 X:11111831-11111914 8 Hsp60 FBtr0073435|FBtr0073434 11111824|11111824 11112308|11112308 TGATGAGA 8mer-A1 dme-miR-2a-2-5p X + 11111831 11111915 3'utr Hsp60 FlyBase G45641.1 TGCCACTGACTGGTCGACAGCCGGAGAGGGGGAGGGAGATGTGATGAGAACCGAAACCAGCATACTGTTTAAGTCACGATGTGGA 50 11111874 0.889051715 7 49 142 0.985915493 1.84509804 0.281690141 0.26 0.478873239 50 1 0 70 X:11111831-11111915 8 45 3113 FBgn0015245 2987.88 154.9833333 236.8566667 0.015060846 0.290353801 0.189988319 -3 -2 -2.5 0.2 dme-miR-263a-5p 7mer-m1 TGCCATT X 11112690 11112696 - X_11112690_11112696_- 0.74830717 0.73159498 0.739951075 0.01181731 CG11122 FBtr0073481 11112393 11112850 X - 11112653 11112722 3'utr CG11122 FlyBase G66526.1 ATCGCCGCCATCGATCACATACGTACTGCCATTGTGTCATCGTTAATCGTTAACGCCGGCGCCAGGAGGG 29 11112691 0.980362346 6 28 198 0.974358974 1.278753601 0.076923077 0.172413793 0.384615385 29 0 1 38 X:11112653-11112722 7 CG11122 FBtr0073481 11112393 11112850 TGCCATT 7mer-m1 dme-miR-263a-5p X - 11112643 11112720 3'utr CG11122 FlyBase G50089.1 CGCCGCCATCGATCACATACGTACTGCCATTGTGTCATCGTTAATCGTTAACGCCGGCGCCAGGAGGGGATCAGGATC 14 11112691 0.97753838 4 14 95 1 1.477121255 0.2 0.714285714 0.866666667 14 0 0 30 X:11112643-11112720 7 20 3114 FBgn0030266 709.6566667 7.043333333 10.83 0.028182642 2.8395646 1.846722068 -5 -5 -5 0.2 dme-miR-277-3p 7mer-m8 TGCATTT X 11129983 11129989 - X_11129983_11129989_- 0.61924275 0.612449589 0.61584617 0.004803447 Klp10A FBtr0346270|FBtr0073479|FBtr0073477|FBtr0073478 11129360|11129360|11129360|11129360 11130979|11130979|11130979|11130979 X - 11129964 11130006 3'utr Klp10A FlyBase G66557.1 ATGATTTAGAGATGATTTGCATTTCATTTTGTACTAATATTTA 8 11129990 0.990776445 3 7 78 1 1 0.1 0.25 0.4 8 0 0 10 X:11129964-11130006 7 Klp10A FBtr0073478|FBtr0073477|FBtr0346270|FBtr0073479 11129360|11129360|11129360|11129360 11130979|11130979|11130979|11130979 TGCATTT 7mer-m8 dme-miR-277-3p X - 11129955 11130011 3'utr Klp10A FlyBase G50110.1 TTATTATGATTTAGAGATGATTTGCATTTCATTTTGTACTAATATTTATTGCATATA 6 11129990 0.990042897 3 6 63 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 X:11129955-11130011 7 5.5 3115 FBgn0030268 2688.253333 72.09666667 110.64 0.002045938 0.076286467 0.049710774 1 1 1 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 11139630 11139635 + X_11139630_11139635_+ 0.999881037 0.754458896 0.877169966 0.173539631 CG18292 FBtr0073437|FBtr0330387 11138901|11138943 11139689|11139689 X + 11139587 11139653 3'utr CG18292 FlyBase G60404.1 ACTATATGTATGAGAGCAAATACGACTAAGTTCAAGCATGTATACCAAACCGAAACCGAAATCGAAA 15 11139627 0.774037782 7 13 57 0.894736842 1.230448921 0.105263158 0.2 0.368421053 15 2 0 17 X:11139587-11139653 6 CG18292 FBtr0330387|FBtr0073437 11138943|11138901 11139689|11139689 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 11139605 11139647 3'utr CG18292 FlyBase G45653.1 AATACGACTAAGTTCAAGCATGTATACCAAACCGAAACCGAAA 8 11139627 0.928481755 2 8 30 1 1.079181246 0.333333333 0.375 0.583333333 8 0 0 12 X:11139605-11139647 6 8 3116 FBgn0030269 445.6566667 29.48666667 44.88 0.017951039 0.271309066 0.178253119 3 3 3 0.2 dme-miR-184-5p 6mer3-8 TGATAA X 11163453 11163458 + X_11163453_11163458_+ 0.878993125 0.994581336 0.93678723 0.0817332 Dlic FBtr0073444|FBtr0073443 11162784|11162784 11164670|11164670 X + 11163348 11163479 3'utr Dlic FlyBase G60426.1 TGTTGTGCTCCTCCCAGCGCAGCTAGCTCCGCTCTGCATGTGTTTAAAGGGCCTTGGCGAGATGACAGAGAGAGAGAGAGAGAGAGATAGAGAGAGAGAGGATAATGATAATGATAATGGTAACGATAATGA 41 11163451 0.96468802 11 35 183 0.844444444 1.278753601 0.155555556 0.097560976 0.177777778 41 6 1 38 X:11163348-11163479 6 Dlic FBtr0073444|FBtr0073443 11162784|11162784 11164670|11164670 TGATAA 6mer3-8 dme-miR-184-5p X + 11163392 11163473 3'utr Dlic FlyBase G45671.1 TAAAGGGCCTTGGCGAGATGACAGAGAGAGAGAGAGAGAGAGATAGAGAGAGAGAGGATAATGATAATGATAATGGTAACGA 34 11163451 0.947847317 6 29 122 0.875 1.213074825 0.178571429 0.5 0.696428571 34 5 2 49 X:11163392-11163473 6 28.5 3117 FBgn0030276 2529.746667 84.58333333 130.21 0.01126595 0.336945813 0.218877198 2 2 2 0.2 dme-miR-1008-3p 6mer3-8 AGCTGT X 11163566 11163571 + X_11163566_11163571_+ 0.842537744 0.85066907 0.846603407 0.005749768 Dlic FBtr0073444|FBtr0073443 11162784|11162784 11164670|11164670 X + 11163554 11163658 3'utr Dlic FlyBase G60427.1 AATTATTTAATGAGCTGTAAAATGTAATTAACAAATGGCAGACAAACGAGAGATTCGAACACGATTCAAGATCCCTGCGATGATGAGTATGGCTTGCTACTAGCC 13 11163564 0.967206905 9 12 64 1 1.230448921 0.470588235 0.230769231 0.411764706 13 0 0 17 X:11163554-11163658 6 Dlic FBtr0073444|FBtr0073443 11162784|11162784 11164670|11164670 AGCTGT 6mer3-8 dme-miR-1008-3p X + 11163540 11163577 3'utr Dlic FlyBase G45672.1 ACATTTGTATAATAAATTATTTAATGAGCTGTAAAATG 6 11163564 0.977534853 2 6 45 1 1.041392685 0.636363636 0.666666667 0.818181818 6 0 0 11 X:11163540-11163577 6 6 3118 FBgn0030276 2529.746667 84.58333333 130.21 0.002371779 0.070935961 0.04607941 2 2 2 0.2 dme-miR-283-5p 8mer-m1 TGATATTT X 11333669 11333676 + X_11333669_11333676_+ 0.554545664 0.526333871 0.540439768 0.019948755 CG1657 FBtr0073448 11333527 11334071 X + 11333648 11333684 3'utr CG1657 FlyBase G60461.1 ATGTATATGTATGTCTGTGTCTGATATTTGTGTAAAA 7 11333668 0.614516572 5 7 65 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 X:11333648-11333684 8 CG1657 FBtr0073448 11333527 11334071 TGATATTT 8mer-m1 dme-miR-283-5p X + 11333603 11333677 3'utr CG1657 FlyBase G45699.1 TCCCATCCCACTCTCTCCTCCAGTCGATATTTTCCATATTTATATATGTATATGTATGTCTGTGTCTGATATTTG 10 11333663 0.991519419 6 10 108 1 1.278753601 0.157894737 0.7 0.842105263 10 0 0 19 X:11333603-11333677 8 7 3119 FBgn0030286 666.2266667 13.88 21.43333333 0.010506935 0.504322767 0.32659409 1 6 3.5 0.2 dme-miR-8-3p 7mer-A1 AGTATTA X 11334360 11334366 - X_11334360_11334366_- 0.822835025 0.823227273 0.823031149 0.000277398 Kap3 FBtr0343145|FBtr0289956|FBtr0289954|FBtr0289955|FBtr0343146 11334185|11334185|11334185|11334185|11334185 11334788|11334788|11334788|11334788|11334788 X - 11334337 11334428 3'utr Kap3 FlyBase G66610.1 ATGGCTTAGCTTCCACTTTGGTTGTTCGCAACGCAATTACTGTGCAATAATCTCTCACTTAAAGTATTACGTCGAACGTTTTTAGTTGTACT 11 11334370 0.990975075 9 10 91 0.909090909 1 0.272727273 0 0 11 1 0 10 X:11334337-11334428 7 Kap3 FBtr0289956|FBtr0289954|FBtr0289955|FBtr0343146|FBtr0343145 11334185|11334185|11334185|11334185|11334185 11334788|11334788|11334788|11334788|11334788 AGTATTA 7mer-A1 dme-miR-8-3p X - 11334350 11334428 3'utr Kap3 FlyBase G50154.1 ATGGCTTAGCTTCCACTTTGGTTGTTCGCAACGCAATTACTGTGCAATAATCTCTCACTTAAAGTATTACGTCGAACGT 10 11334369 0.980381356 6 9 83 0.909090909 1 0.090909091 0.1 0.181818182 10 1 0 10 X:11334350-11334428 7 7 3120 FBgn0028421 198.6666667 6.38 9.766666667 0.035234899 1.097178683 0.716723549 4 3 3.5 0.2 dme-miR-1007-3p 7mer-m8 TGAGCTT X 11344132 11344138 + X_11344132_11344138_+ 0.605836923 0.586157492 0.595997208 0.013915437 CG34348 FBtr0112557 11344094 11344734 X + 11344108 11344204 3'utr CG34348 FlyBase G60467.2 TAGCGCATAGAGAGATTAACAGATTGAGCTTGGTCCTGGCCATACAAAACAGACTTTGTTCCATGTACTTGATGACAGTACTTCATGGCAGCGCCAT 80 11344124 0.966840782 16 56 537 0.714285714 0.967815317 0.120879121 0.125 0.230769231 80 20 6 65 X:11344108-11344204 7 CG34348 FBtr0112557 11344094 11344734 TGAGCTT 7mer-m8 dme-miR-1007-3p X + 11344088 11344222 stop_codon CG34348 FlyBase G45703.1 AGGAGTGATCCATGATCGTTTAGCGCATAGAGAGATTAACAGATTGAGCTTGGTCCTGGCCATACAAAACAGACTTTGTTCCATGTACTTGATGACAGTACTTCATGGCAGCGCCATATATGCATATATCTCACT 59 11344124 0.986234546 14 42 388 0.727272727 1.158362492 0.070707071 0.423728814 0.656565657 59 23 4 72 X:11344088-11344222 7 50 3121 FBgn0085377 250.7633333 13.94666667 21.41 0.199391192 3.585086042 2.33535731 8 8 8 0.2 dme-miR-33-5p 7mer-A1 AATGCAA X 11344532 11344538 + X_11344532_11344538_+ 0.774893256 0.774984691 0.774938974 6.46E-05 CG34348 FBtr0112557 11344094 11344734 X + 11344470 11344542 3'utr CG34348 FlyBase G60469.1 AGGCACATTAAGCAATTATGTCGCTAGTTTTCCATTAGGTATATCATTTTTGTACCTTTTTTAATGCAACAGT 5 11344529 0.988405962 5 5 58 1 0.698970004 0.2 0 0 5 0 0 5 X:11344470-11344542 7 CG34348 FBtr0112557 11344094 11344734 AATGCAA 7mer-A1 dme-miR-33-5p X + 11344510 11344542 3'utr CG34348 FlyBase G45705.1 ATATCATTTTTGTACCTTTTTTAATGCAACAGT 4 11344529 0.985609229 4 4 34 1 0.698970004 0.2 0.25 0.4 4 0 0 5 X:11344510-11344542 7 3 3122 FBgn0085377 250.7633333 13.94666667 21.41 0.011963472 0.215105163 0.140121439 3 3 3 0.2 dme-miR-317-3p 6mer3-8 TGTGTT X 11358250 11358255 + X_11358250_11358255_+ 0.993497352 0.964953618 0.979225485 0.020183515 dsh FBtr0073454 11358224 11358724 X + 11358158 11358271 stop_codon dsh FlyBase G60497.1 GAGGCGGTGGCGGTGGCGGCAACAATACCAACGATCAGGACGTATCCGTATTTAATTACGTATTGTAGAAACCTTTCTTTTTGCAATCAAATTGTGTTTTTAATTAATTAAATT 20 11358249 0.986814766 9 18 158 0.956521739 1.342422681 0.043478261 0.1 0.217391304 20 1 0 22 X:11358158-11358271 6 dsh FBtr0073454 11358224 11358724 TGTGTT 6mer3-8 dme-miR-317-3p X + 11358233 11358273 3'utr dsh FlyBase G45723.1 TCTTTTTGCAATCAAATTGTGTTTTTAATTAATTAAATTAA 5 11358249 0.975905947 2 5 73 1 0.903089987 0 0.6 0.75 5 0 0 8 X:11358233-11358273 6 7 3123 FBgn0000499 392 16.79 25.82333333 0.017857143 0.41691483 0.271072673 1 1 1 0.2 dme-miR-14-3p 6mer3-8 AAGACT X 11360437 11360442 + X_11360437_11360442_+ 0.955954403 0.922787398 0.939370901 0.023452611 Pa1 FBtr0073456 11359762 11360929 X + 11360397 11360634 3'utr Pa1 FlyBase G60505.1 TGACAATATTCTTGATAGTATTGTCCGAAACCGACGTTTGAAGACTAGAATATAGAATATAGGATAGAACGGATGTAAATTTAAATCCAATGCGAGTAAAGCAGATAACAAGATAGGCAACTGTAGATCAGTCAACTTCTGTACATAAAAGAACTGAATTTCACTAATAGCTGTTAAAACTAGAATATAGAATGTAGGATAGAACGGATGTACATTTAAATCCAAGATGAGTAAGATA 110 11360442 0.975511654 24 105 612 0.96031746 2.08278537 0.142857143 0.127272727 0.238095238 110 5 0 121 X:11360397-11360634 6 Pa1 FBtr0073456 11359762 11360929 AAGACT 6mer3-8 dme-miR-14-3p X + 11360409 11360467 3'utr Pa1 FlyBase G45732.1 TGATAGTATTGTCCGAAACCGACGTTTGAAGACTAGAATATAGAATATAGGATAGAACG 45 11360433 0.747640826 5 42 253 0.971014493 1.826074803 0.086956522 0.4 0.608695652 45 2 0 67 X:11360409-11360467 6 50.5 3124 FBgn0030294 242.3333333 18.24 28.02 0.208390646 2.768640351 1.802284083 -5 4 -0.5 0.2 dme-miR-1007-3p 6mer3-8 TGAGCT X 11360735 11360740 + X_11360735_11360740_+ 0.993039489 0.833702531 0.91337101 0.112668273 Pa1 FBtr0073456 11359762 11360929 X + 11360661 11360789 3'utr Pa1 FlyBase G60506.1 AGTCAACTTCCGTACATACAACTAATACGAAATGAATCAGCACAGTTGCCCTACTAAACAATATCAACTTCTCATGAGCTAAAAATAGACTACTAAGAATTATGATAAGCCAAGGTTGTTCCGGAAAAC 19 11360735 0.976716669 9 16 97 0.85 1.230448921 0.15 0.052631579 0.1 19 3 0 17 X:11360661-11360789 6 Pa1 FBtr0073456 11359762 11360929 TGAGCT 6mer3-8 dme-miR-1007-3p X + 11360701 11360764 3'utr Pa1 FlyBase G45734.1 CACAGTTGCCCTACTAAACAATATCAACTTCTCATGAGCTAAAAATAGACTACTAAGAATTATG 16 11360746 0.964495768 6 15 83 0.95 1.278753601 0.1 0.25 0.4 16 1 0 19 X:11360701-11360764 6 14 3125 FBgn0030294 242.3333333 18.24 28.02 0.057771664 0.76754386 0.499643112 0 -11 -5.5 0.2 dme-miR-317-3p 6mer3-8 TGTGTT X 11361418 11361423 - X_11361418_11361423_- 0.96568234 0.966517832 0.966100086 0.000590788 hop FBtr0073457 11360928 11361814 X - 11361402 11361456 3'utr hop FlyBase G66628.1 ATGTATATGTATAAACAAATTCTCAACCTACTTTGTGTTATACATTTTAGACAAC 30 11361425 0.728777607 6 29 268 0.970588235 1.51851394 0 0.133333333 0.235294118 30 1 0 33 X:11361402-11361456 6 hop FBtr0073457 11360928 11361814 TGTGTT 6mer3-8 dme-miR-317-3p X - 11361365 11361450 3'utr hop FlyBase G50168.1 ATGTATAAACAAATTCTCAACCTACTTTGTGTTATACATTTTAGACAACTTTGTTAAATATTGTTAAGCTTGAGCTTCAATTTTTT 22 11361425 0.983430569 5 22 173 1 1.556302501 0.055555556 0.454545455 0.666666667 22 0 0 36 X:11361365-11361450 6 15 3126 FBgn0004864 288.6033333 6.79 10.3 0.051974452 2.209131075 1.45631068 2 2 2 0.2 dme-miR-317-3p 7mer-A1 GTGTTCA X 11406703 11406709 + X_11406703_11406709_+ 0.82319758 0.773296547 0.798247063 0.035285406 dlg1 FBtr0330390|FBtr0301289|FBtr0073485|FBtr0112813|FBtr0073486|FBtr0073488|FBtr0308088|FBtr0073489|FBtr0073487|FBtr0308089|FBtr0333261|FBtr0112812|FBtr0073490|FBtr0333262 11406300|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177 11407751|11407751|11407751|11409776|11407751|11407751|11407985|11407751|11407751|11408338|11408338|11409776|11407751|11409776 X + 11406681 11406762 3'utr dlg1 FlyBase G60525.1 TGGCATATGAGATGAGATATGGGTGTTCAAACGGTAGCGGACAAAGGTGTATAGTTTTTAGTTAGAACAAAGTTGGATATAA 8 11406700 0.981467526 6 8 57 1 0.954242509 0.111111111 0.125 0.222222222 8 0 0 9 X:11406681-11406762 7 dlg1 FBtr0073487|FBtr0333261|FBtr0112812|FBtr0073490|FBtr0308089|FBtr0333262|FBtr0073489|FBtr0073485|FBtr0301289|FBtr0073486|FBtr0112813|FBtr0073488|FBtr0330390|FBtr0308088 11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406300|11406177 11407751|11408338|11409776|11407751|11408338|11409776|11407751|11407751|11407751|11407751|11409776|11407751|11407751|11407985 GTGTTCA 7mer-A1 dme-miR-317-3p X + 11406675 11406762 3'utr dlg1 FlyBase G45739.1 GGCATATGGCATATGAGATGAGATATGGGTGTTCAAACGGTAGCGGACAAAGGTGTATAGTTTTTAGTTAGAACAAAGTTGGATATAA 13 11406701 0.98017639 8 11 84 0.823529412 1.146128036 0.117647059 0.230769231 0.411764706 13 3 0 14 X:11406675-11406762 7 3.5 3127 FBgn0001624 7812.856667 177.1533333 273.5833333 0.00044798 0.019756896 0.012793177 3 2 2.5 0.2 dme-miR-13b-2-5p 7mer-m1 TTGACGC X 11407329 11407335 + X_11407329_11407335_+ 0.769590312 0.756986488 0.7632884 0.008912232 dlg1 FBtr0330390|FBtr0301289|FBtr0073485|FBtr0112813|FBtr0073486|FBtr0073488|FBtr0308088|FBtr0073489|FBtr0073487|FBtr0308089|FBtr0333261|FBtr0112812|FBtr0073490|FBtr0333262 11406300|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177 11407751|11407751|11407751|11409776|11407751|11407751|11407985|11407751|11407751|11408338|11408338|11409776|11407751|11409776 X + 11407318 11407377 3'utr dlg1 FlyBase G60531.1 ATTGATGAATATTGACGCTAATAACGATGGAGATGATGAAAAACGTTGGTGCATTTGTTG 22 11407329 0.767864433 6 20 125 0.935483871 1.462397998 0.322580645 0.227272727 0.451612903 22 2 0 29 X:11407318-11407377 7 dlg1 FBtr0073487|FBtr0333261|FBtr0112812|FBtr0073490|FBtr0308089|FBtr0333262|FBtr0073489|FBtr0073485|FBtr0301289|FBtr0073486|FBtr0112813|FBtr0073488|FBtr0330390|FBtr0308088 11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406300|11406177 11407751|11408338|11409776|11407751|11408338|11409776|11407751|11407751|11407751|11407751|11409776|11407751|11407751|11407985 TTGACGC 7mer-m1 dme-miR-13b-2-5p X + 11407309 11407423 3'utr dlg1 FlyBase G45743.1 TAAATATATATTGATGAATATTGACGCTAATAACGATGGAGATGATGAAAAACGTTGGTGCATTTGTTGTTAGATGTATGTAATTTTTCCCACTCGCCTTTGCCTAAAAGCAACA 27 11407329 0.861610961 10 26 188 0.974358974 1.278753601 0.358974359 0.333333333 0.538461538 27 0 1 38 X:11407309-11407423 7 14.5 3128 FBgn0001624 7812.856667 177.1533333 273.5833333 0.001855915 0.081849998 0.053000305 0 0 0 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT X 11432091 11432097 - X_11432091_11432097_- 0.658843442 0.658967621 0.658905531 8.78E-05 Evi5 FBtr0300733|FBtr0332620|FBtr0073547 11431331|11431331|11430521 11433279|11434760|11433279 X - 11432053 11432118 3'utr Evi5 FlyBase G66657.1 TGGTTCATTTAACCCATATTTGGCAGCTTGTCGCGTAAAACGATTTCGATTTTGACATCGACTTTC 310 11432098 0.7391194 10 302 2354 0.974093264 2.274157849 0.007772021 0.193548387 0.352331606 310 9 1 376 X:11432053-11432118 7 Evi5 FBtr0300733|FBtr0332620|FBtr0073547 11431331|11431331|11430521 11433279|11434760|11433279 GGCAGCT 7mer-m8 dme-miR-980-3p X - 11432058 11432127 3'utr Evi5 FlyBase G50187.1 TGATTTATATGGTTCATTTAACCCATATTTGGCAGCTTGTCGCGTAAAACGATTTCGATTTTGACATCGA 151 11432098 0.978917616 10 149 1096 0.99122807 2.354108439 0.00877193 0.370860927 0.583333333 151 2 0 226 X:11432058-11432127 7 226.5 3129 FBgn0262740 507.6533333 10.50666667 16.15 0.446170615 21.55774112 14.0247678 1 1 1 0.2 dme-miR-1003-3p 7mer-A1 TGTGAGA X 11432830 11432836 - X_11432830_11432836_- 0.819491994 0.819405656 0.819448825 6.10E-05 Evi5 FBtr0300733|FBtr0332620|FBtr0073547 11431331|11431331|11430521 11433279|11434760|11433279 X - 11432695 11432896 3'utr Evi5 FlyBase G66660.1 ATGTTTTGCAATCGAAACACACTCATATTTATTTATTTTAAATCCTAATTGAAACGATATTGTGAGAGTATTTTACACCCCTGTACATTAATCAATACGGCAACTAATCCGATTCGATGCGATGCGATGGATTGGAGTTAGGAGATTGGCATTTTGATATACCCTAGATGTATGGCACATATGCAATGCAATGAATTTTATG 80 11432837 0.900703208 25 75 580 0.943820225 1.225309282 0.101123596 0.1 0.191011236 80 1 4 84 X:11432695-11432896 7 Evi5 FBtr0300733|FBtr0332620|FBtr0073547 11431331|11431331|11430521 11433279|11434760|11433279 TGTGAGA 7mer-A1 dme-miR-1003-3p X - 11432781 11432850 3'utr Evi5 FlyBase G50188.2 AATTGAAACGATATTGTGAGAGTATTTTACACCCCTGTACATTAATCAATACGGCAACTAATCCGATTCG 31 11432837 0.767691074 5 28 190 0.954545455 1.62324929 0.295454545 0.35483871 0.545454545 31 2 0 42 X:11432781-11432850 7 31 3130 FBgn0262740 507.6533333 10.50666667 16.15 0.061065294 2.950507614 1.919504644 1 1 1 0.2 dme-bantam-3p 6mer3-8 TGATCT X 11433320 11433325 - X_11433320_11433325_- 0.50391454 0.585253644 0.544584092 0.057515429 Evi5 FBtr0332620 11431331 11434760 X - 11433253 11433352 stop_codon Evi5 FlyBase G66662.1 GATCGAATCGACCGAGATCGACTTCAATGATCTGAATATGGTGAGGCGCGGAAGTACGGAGCTCTCCACATAACCTACAGATGGATCAGATCTAGCATAT 64 11433325 0.976300365 5 64 412 1 1.880813592 0.328947368 0.15625 0.289473684 64 0 0 76 X:11433253-11433352 6 Evi5 FBtr0332620 11431331 11434760 TGATCT 6mer3-8 dme-bantam-3p X - 11433299 11433346 3'utr Evi5 FlyBase G50190.1 ATCGACCGAGATCGACTTCAATGATCTGAATATGGTGAGGCGCGGAAG 35 11433325 0.875833396 3 33 232 0.934782609 1.633468456 0.52173913 0.228571429 0.413043478 35 3 0 43 X:11433299-11433346 6 48 3131 FBgn0262740 507.6533333 10.50666667 16.15 0.094552713 4.568527919 2.972136223 0 0 0 0.2 dme-miR-92b-3p 6mer3-8 GTGCAA X 11458577 11458582 + X_11458577_11458582_+ 0.766431478 0.670958414 0.718694946 0.067509676 HP5 FBtr0073499 11458311 11459227 X + 11458564 11458586 3'utr HP5 FlyBase G60557.1 GAGAAAGCTATTGGTGCAAACGT 6 11458575 0.600288547 3 6 22 1 0.903089987 0 0.166666667 0.375 6 0 0 8 X:11458564-11458586 6 HP5 FBtr0073499 11458311 11459227 GTGCAA 6mer3-8 dme-miR-92b-3p X + 11458537 11458584 3'utr HP5 FlyBase G45762.1 GTTGAAAATACCAAAGTATTTTTGCAAGAGAAAGCTATTGGTGCAAAC 6 11458575 0.960394324 3 5 24 0.9 0.653212514 0.5 0.333333333 0.6 6 0 1 9 X:11458537-11458584 6 4.5 3132 FBgn0030301 1355.486667 49.67666667 76.80666667 0.003319841 0.090585788 0.058588664 2 2 2 0.2 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT X 11553276 11553282 + X_11553276_11553282_+ 0.369396944 0.339544471 0.354470707 0.021108834 Drak FBtr0301021|FBtr0340295|FBtr0301020 11552953|11552953|11552953 11555045|11555045|11555045 X + 11553218 11553302 3'utr Drak FlyBase G60586.1 AATAGGAAACGGGAACGGGAACTTAAACTTGAACTGGAATTGGAAGTGGAGCTGGAATTGGTGCTGCAGCGGGAGATGGAAGTGG 26 11553275 0.970333928 8 23 132 0.882352941 1.477121255 0.852941176 0.269230769 0.441176471 26 4 0 30 X:11553218-11553302 7 Drak FBtr0301021|FBtr0340295|FBtr0301020 11552953|11552953|11552953 11555045|11555045|11555045 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" X + 11553245 11553297 3'utr Drak FlyBase G45781.1 CTTGAACTGGAATTGGAAGTGGAGCTGGAATTGGTGCTGCAGCGGGAGATGGA 9 11553275 0.967972778 2 7 43 0.8 0.903089987 0.4 0.111111111 0.2 9 2 0 8 X:11553245-11553297 7 13 3133 FBgn0052666 1917.906667 50.05 76.71666667 0.006778223 0.25974026 0.169454703 1 1 1 0.2 dme-miR-14-3p 6mer3-8 AAGACT X 11563120 11563125 - X_11563120_11563125_- 0.581899409 0.774205137 0.678052273 0.135980665 RpII215 FBtr0073542 11562798 11563511 X - 11563091 11563164 3'utr RpII215 FlyBase G66678.1 CTTTGCACAACCCACTGTATGAAATTGTTTACTAACTGGAAGACTCTTGTCACTCTTCTGCAAAGTACTTTCAC 22 11563110 0.985400882 12 20 156 0.935483871 1.462397998 0.064516129 0.363636364 0.548387097 22 2 0 29 X:11563091-11563164 6 RpII215 FBtr0073542 11562798 11563511 AAGACT 6mer3-8 dme-miR-14-3p X - 11563091 11563151 3'utr RpII215 FlyBase G50202.1 ACTGTATGAAATTGTTTACTAACTGGAAGACTCTTGTCACTCTTCTGCAAAGTACTTTCAC 9 11563139 0.984892293 7 9 71 1 1.079181246 0.166666667 0.333333333 0.5 9 0 0 12 X:11563091-11563151 6 10 3134 FBgn0003277 4688.79 83.91 128.7166667 0.002132746 0.119175307 0.077690017 -15 14 -0.5 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG X 11605490 11605495 + X_11605490_11605495_+ 0.998904031 0.998745542 0.998824787 0.000112076 rho-4 FBtr0073518|FBtr0073519 11605445|11605445 11606288|11606000 X + 11605469 11605506 3'utr rho-4 FlyBase G60633.1 AGCCCTAACCCTTAACCATGTCCAAAGTGCACTTCGAT 11 11605487 0.673163228 4 9 59 0.916666667 0.740362689 0.166666667 0.090909091 0.166666667 11 0 1 11 X:11605469-11605506 6 rho-4 FBtr0073519|FBtr0073518 11605445|11605445 11606000|11606288 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" X + 11605438 11605524 stop_codon rho-4 FlyBase G45810.1 TACAACTAGCCCCATCACTAGCTCTAGCCCTAGCCCTAACCCTTAACCATGTCCAAAGTGCACTTCGATATTGAGCCGAGGTTGCAG 15 11605487 0.960185433 9 14 66 0.96 1.380211242 0.2 0.6 0.76 15 1 0 24 X:11605438-11605524 6 9 3135 FBgn0030318 1970.58 111.7533333 171.94 0.004567183 0.080534511 0.052343841 3 3 3 0.2 dme-miR-305-3p 7mer-m8 ATGTGCC X 11605560 11605566 + X_11605560_11605566_+ 0.674097258 0.54683396 0.610465609 0.089988742 rho-4 FBtr0073518|FBtr0073519 11605445|11605445 11606288|11606000 X + 11605526 11605582 3'utr rho-4 FlyBase G60634.1 ACGCACAGTACTATATATAGGATTTCTTCTGACCATGTGCCTATGCCAGCTGCAAAA 6 11605561 0.977025278 4 6 40 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 X:11605526-11605582 7 rho-4 FBtr0073519|FBtr0073518 11605445|11605445 11606000|11606288 ATGTGCC 7mer-m8 dme-miR-305-3p X + 11605535 11605573 3'utr rho-4 FlyBase G45811.1 ACTATATATAGGATTTCTTCTGACCATGTGCCTATGCCA 8 11605552 0.64287683 3 8 74 1 1.041392685 0.636363636 0.125 0.363636364 8 0 0 11 X:11605535-11605573 7 6.5 3136 FBgn0030318 1970.58 111.7533333 171.94 0.003298521 0.058163813 0.037803885 -1 8 3.5 0.2 dme-miR-14-3p 8mer-A1 AAGACTGA X 11606698 11606705 - X_11606698_11606705_- 0.638907342 0.639121897 0.639014619 0.000151745 CG2247 FBtr0306133|FBtr0306135|FBtr0073536|FBtr0306134 11606492|11606492|11606288|11606492 11606782|11606782|11606782|11606782 X - 11606667 11606774 3'utr CG2247 FlyBase G66713.1 AACGCACTAGTTATTCCTAGGTGCCATAAGTTAGCTCATATATAAGCCCTCCCAGTAGCAGAGAATGCCAAGACTGAGTCTTCTCGAGAAGCATCACCTCCGAACACC 118 11606709 0.874134005 12 98 581 0.810218978 1.568201724 0.160583942 0.144067797 0.262773723 118 24 2 111 X:11606667-11606774 8 CG2247 FBtr0073536|FBtr0306134|FBtr0306133|FBtr0306135 11606288|11606492|11606492|11606492 11606782|11606782|11606782|11606782 AAGACTGA 8mer-A1 dme-miR-14-3p X - 11606680 11606735 3'utr CG2247 FlyBase G50238.1 ATATAAGCCCTCCCAGTAGCAGAGAATGCCAAGACTGAGTCTTCTCGAGAAGCATC 81 11606709 0.875378357 6 60 402 0.736 1.486666573 0.152 0.395061728 0.608 81 31 2 92 X:11606680-11606735 8 89.5 3137 FBgn0030320 921.3333333 30.09666667 46.31666667 0.097141823 2.973751246 1.932349766 4 4 4 0.2 dme-miR-980-3p 6mer3-8 GGCAGC X 11693738 11693743 + X_11693738_11693743_+ 0.975331319 0.999946679 0.987638999 0.017405716 bif FBtr0334464|FBtr0073527|FBtr0334465 11689550|11692808|11691412 11694740|11694740|11694740 X + 11693641 11693804 3'utr bif FlyBase G60701.1 CAGCAGCAGTGGGAGCAGCAATGGCAGCCACAGTCCAGGCAGCAACGGGAGCAGTCCAGCCGGAGCTGCGGGCAGCCGGTTGATGTTCAACGGGAATGGCAGCATTATGGGCATCGGCGAGGGACTGATCAAGGAGGGCGACTTGGCGGCAACGGAAGCAGGAC 63 11693737 0.999821232 13 60 180 0.96 1.857332496 0.373333333 0.126984127 0.266666667 63 3 0 72 X:11693641-11693804 6 bif FBtr0334465|FBtr0334464|FBtr0073527 11691412|11689550|11692808 11694740|11694740|11694740 GGCAGC 6mer3-8 dme-miR-980-3p X + 11693642 11693856 3'utr bif FlyBase G45853.1 AGCAGCAGTGGGAGCAGCAATGGCAGCCACAGTCCAGGCAGCAACGGGAGCAGTCCAGCCGGAGCTGCGGGCAGCCGGTTGATGTTCAACGGGAATGGCAGCATTATGGGCATCGGCGAGGGACTGATCAAGGAGGGCGACTTGGCGGCAACGGAAGCAGGACCTGGAACTGCAGATGGAGCAGGTGCCTCCAAGAAGGGTTCAGCTGTGGACGA 39 11693737 0.952141623 16 37 108 0.950819672 1.763427994 0.393442623 0.333333333 0.573770492 39 3 0 58 X:11693642-11693856 6 18 3138 FBgn0014133 2033.663333 48.19333333 73.77666667 0.008851023 0.373495643 0.243979578 1 1 1 0.2 dme-miR-7-5p 6mer3-8 GTCTTC X 11694254 11694259 + X_11694254_11694259_+ 0.818176443 0.933285139 0.875730791 0.081394142 bif FBtr0334464|FBtr0073527|FBtr0334463|FBtr0334465|FBtr0073526 11689550|11692808|11693937|11691412|11693937 11694740|11694740|11694740|11694740|11694740 X + 11694210 11694265 3'utr bif FlyBase G60705.1 TAGAGATCCGATGTGTATGTGTACAACAGCAAGCGTGTGTGTCTGTCTTCTTTATA 38 11694228 0.650923563 11 36 280 0.934782609 1.633468456 0.130434783 0.210526316 0.347826087 38 3 0 43 X:11694210-11694265 6 bif FBtr0073526|FBtr0334463|FBtr0334465|FBtr0334464|FBtr0073527 11693937|11693937|11691412|11689550|11692808 11694740|11694740|11694740|11694740|11694740 GTCTTC 6mer3-8 dme-miR-7-5p X + 11694212 11694263 3'utr bif FlyBase G45857.1 GAGATCCGATGTGTATGTGTACAACAGCAAGCGTGTGTGTCTGTCTTCTTTA 15 11694252 0.693989373 7 13 107 0.92 1.06069784 0.12 0.4 0.64 15 1 1 23 X:11694212-11694263 6 15.5 3139 FBgn0014133 2033.663333 48.19333333 73.77666667 0.007621714 0.321621248 0.210093526 26 2 14 0.2 dme-miR-308-3p 7mer-m1 TGTGATT X 11704012 11704018 + X_11704012_11704018_+ 0.473217918 0.519285049 0.496251483 0.032574359 PhKgamma FBtr0301501|FBtr0301500|FBtr0090002|FBtr0343587|FBtr0343648 11703642|11703642|11703642|11703642|11703642 11704394|11704394|11704394|11704394|11704394 X + 11703983 11704039 3'utr PhKgamma FlyBase G60721.1 AACATTACCTCCCCTGCCTTCTTCGTCCTTGTGATTTTGTTTAATACTTTTTAATTC 99 11704018 0.686928454 10 94 1183 0.938596491 1.427323786 0.263157895 0.111111111 0.228070175 99 4 3 107 X:11703983-11704039 7 PhKgamma FBtr0343648|FBtr0343587|FBtr0090002|FBtr0301500|FBtr0301501 11703642|11703642|11703642|11703642|11703642 11704394|11704394|11704394|11704394|11704394 TGTGATT 7mer-m1 dme-miR-308-3p X + 11703984 11704030 3'utr PhKgamma FlyBase G45868.1 ACATTACCTCCCCTGCCTTCTTCGTCCTTGTGATTTTGTTTAATACT 85 11704018 0.660804767 12 84 982 0.991935484 1.788875116 0.282258065 0.294117647 0.516129032 85 0 1 123 X:11703984-11704030 7 82 3140 FBgn0011754 327.82 14.47333333 22.3 0.25013727 5.665591893 3.677130045 -6 -6 -6 0.2 dme-miR-14-3p 7mer-A1 AGACTGA X 11723711 11723717 + X_11723711_11723717_+ 0.762593373 0.762121534 0.762357454 0.000333684 Tango10 FBtr0073553|FBtr0332955|FBtr0073552 11722787|11722787|11722787 11723854|11723854|11723854 X + 11723634 11723779 3'utr Tango10 FlyBase G60749.1 TTGGCGTTAATGTAGTTGTTAAATAAAATGTCTCTTCAAAAATCAGCTGTGGTCTATTATTATTATGCGTTTTCATTAGACTGAACTAAAGAGTGTAGAATTACTGTCATTTAACGATATAATTTAGTGATTTCGGTTTTAATTAA 522 11723709 0.914210113 25 504 4182 0.968944099 1.95008655 0.046583851 0.185823755 0.340062112 522 14 6 624 X:11723634-11723779 7 Tango10 FBtr0073552|FBtr0332955|FBtr0073553 11722787|11722787|11722787 11723854|11723854|11723854 AGACTGA 7mer-A1 dme-miR-14-3p X + 11723657 11723821 3'utr Tango10 FlyBase G45886.1 TAAAATGTCTCTTCAAAAATCAGCTGTGGTCTATTATTATTATGCGTTTTCATTAGACTGAACTAAAGAGTGTAGAATTACTGTCATTTAACGATATAATTTAGTGATTTCGGTTTTAATTAAATTATTGCCTAACGTTGACCAGTCATTTTGTAAAATAACGTC 395 11723709 0.892218729 20 384 2984 0.976950355 1.963000348 0.044326241 0.293670886 0.505319149 395 8 5 551 X:11723657-11723821 7 378 3141 FBgn0030330 148.3733333 5.923333333 9.083333333 2.547627606 63.81541925 41.6146789 2 2 2 0.2 dme-miR-308-3p 7mer-m1 TGTGATT X 11763492 11763498 - X_11763492_11763498_- 0.443130401 0.443130769 0.443130585 2.83E-07 CG9360 FBtr0073613 11763472 11763643 X - 11763483 11763513 3'utr CG9360 FlyBase G66763.1 ATGTACCAAACGTTATGTGATTAAAATTCTT 25 11763501 0.694579367 4 22 174 0.884615385 1.361727836 0.115384615 0.04 0.076923077 25 3 0 23 X:11763483-11763513 7 CG9360 FBtr0073613 11763472 11763643 TGTGATT 7mer-m1 dme-miR-308-3p X - 11763483 11763516 3'utr CG9360 FlyBase G50276.1 TGCATGTACCAAACGTTATGTGATTAAAATTCTT 15 11763501 0.700413501 3 15 110 1 1.361727836 0.086956522 0.466666667 0.652173913 15 0 0 23 X:11763483-11763516 7 19.5 3142 FBgn0030332 279 33.07666667 49.99 0.069892473 0.589539454 0.390078016 3 3 3 0.2 dme-miR-980-3p 6mer3-8 GGCAGC X 11796942 11796947 + X_11796942_11796947_+ 0.988868172 0.963680878 0.976274525 0.017810111 CkIIbeta FBtr0073558|FBtr0307896|FBtr0333204 11795608|11795608|11796668 11797924|11797301|11797565 X + 11796910 11796973 5'utr CkIIbeta FlyBase G60768.1 AAGGATGTGGATCGAAGAAGAGGATGAAGATTGGCAGCAGGACACGAGCAACGAACCGAACGAA 50 11796941 0.786101956 3 49 97 0.949152542 1.748188027 0.186440678 0.16 0.288135593 50 3 0 56 X:11796910-11796973 6 CkIIbeta FBtr0333204|FBtr0073558|FBtr0307896 11796668|11795608|11795608 11797565|11797924|11797301 GGCAGC 6mer3-8 dme-miR-980-3p X + 11796918 11796969 5'utr CkIIbeta FlyBase G45906.1 GGATCGAAGAAGAGGATGAAGATTGGCAGCAGGACACGAGCAACGAACCGAA 36 11796941 0.785545432 3 35 64 0.982142857 1.740362689 0.196428571 0.388888889 0.607142857 36 1 0 55 X:11796918-11796969 6 43 3143 FBgn0000259 3146.093333 305.1066667 469.0433333 0.013667745 0.140934318 0.091675965 1 1 1 0.2 dme-miR-2a-2-5p 8mer-A1 TGATGAGA X 11801933 11801940 - X_11801933_11801940_- 0.564676513 0.596018587 0.58034755 0.022162211 Hsc70-3 FBtr0073609|FBtr0345166|FBtr0073608|FBtr0073610|FBtr0073611 11801694|11801694|11801694|11801694|11801694 11802612|11802612|11802612|11802612|11802612 X - 11801874 11801969 3'utr Hsc70-3 FlyBase G66766.1 ATATATCGGGGAATCGGACTGTATTGTATTGATGAGATATAGAAGAAAGAGAGAGAGAGAGGAGCCAGGGAGCTGCGGGTCGTGCGGAGGAGGAGA 45 11801930 0.961533878 10 43 216 0.962962963 1.238882089 0.240740741 0.133333333 0.277777778 45 0 2 52 X:11801874-11801969 8 Hsc70-3 FBtr0073610|FBtr0073608|FBtr0345166|FBtr0073609|FBtr0073611 11801694|11801694|11801694|11801694|11801694 11802612|11802612|11802612|11802612|11802612 TGATGAGA 8mer-A1 dme-miR-2a-2-5p X - 11801768 11801970 3'utr Hsc70-3 FlyBase G50278.1 AATATATCGGGGAATCGGACTGTATTGTATTGATGAGATATAGAAGAAAGAGAGAGAGAGAGGAGCCAGGGAGCTGCGGGTCGTGCGGAGGAGGAGAATAGGTCGATGAGGAATGGGAACGGCAGAAGAGCAAGAGATAAACCACGAAATCATACGGAAACCACTAGAGAGCAGCGGCACACAACATCGGCCAGGCTTCATAA 46 11801939 0.999950049 18 36 174 0.823529412 1.748188027 0.191176471 0.347826087 0.558823529 46 12 0 56 X:11801768-11801970 8 26 3144 FBgn0001218 13055.07 506.7333333 774.0533333 0.001991563 0.051309038 0.033589417 -10 -1 -5.5 0.2 dme-miR-14-3p 7mer-A1 AGACTGA X 11802532 11802538 - X_11802532_11802538_- 0.801343928 0.79410276 0.797723344 0.005120231 Hsc70-3 FBtr0073609|FBtr0345166|FBtr0073608|FBtr0073610|FBtr0073611 11801694|11801694|11801694|11801694|11801694 11802612|11802612|11802612|11802612|11802612 X - 11802480 11802597 3'utr Hsc70-3 FlyBase G66770.1 CTCACATAACTTACACACAGCCCAGCCTGCATCCATTCGAGATCATAGTGTTGGAATTCAGACTGAAAAAAAAAACAATTATAACTTAATTGCAAACGCAGTAGCCACAACAACAACA 1692 11802541 0.962294804 18 1612 8797 0.951461119 1.792165671 0.326399208 0.153664303 0.290737989 1692 68 30 1921 X:11802480-11802597 7 Hsc70-3 FBtr0073610|FBtr0073608|FBtr0345166|FBtr0073609|FBtr0073611 11801694|11801694|11801694|11801694|11801694 11802612|11802612|11802612|11802612|11802612 AGACTGA 7mer-A1 dme-miR-14-3p X - 11802483 11802602 3'utr Hsc70-3 FlyBase G50282.1 CCCCCCTCACATAACTTACACACAGCCCAGCCTGCATCCATTCGAGATCATAGTGTTGGAATTCAGACTGAAAAAAAAAACAATTATAACTTAATTGCAAACGCAGTAGCCACAACAACA 1303 11802541 0.815950152 19 1256 6595 0.961621622 1.818812184 0.318918919 0.324635457 0.524324324 1303 45 26 1779 X:11802483-11802602 7 1440 3145 FBgn0001218 13055.07 506.7333333 774.0533333 0.110301975 2.841731351 1.860336928 3 3 3 0.2 dme-miR-308-3p 7mer-m1 TGTGATT X 11833432 11833438 + X_11833432_11833438_+ 0.521188824 0.521193178 0.521191001 3.11E-06 rudhira FBtr0305606 11832923 11834386 X + 11833402 11833456 3'utr rudhira FlyBase G60795.1 AAAACAAAACACAAAACTCTGCAAAAAAATTGTGATTTATCGAAAAGAAAAACAA 157 11833431 0.97909335 6 154 1074 0.985294118 1.826074803 0.200980392 0.248407643 0.421568627 157 1 2 201 X:11833402-11833456 7 rudhira FBtr0305606 11832923 11834386 TGTGATT 7mer-m1 dme-miR-308-3p X + 11833406 11833453 3'utr rudhira FlyBase G45916.1 CAAAACACAAAACTCTGCAAAAAAATTGTGATTTATCGAAAAGAAAAA 102 11833432 0.779517959 4 97 694 0.958333333 1.537819095 0.222222222 0.323529412 0.520833333 102 3 3 138 X:11833406-11833453 7 128.5 3146 FBgn0266019 2080.863333 30.08666667 46.56 0.061753215 4.270994904 2.759879725 1 0 0.5 0.2 dme-miR-980-3p 7mer-A1 GCAGCTA X 11833902 11833908 + X_11833902_11833908_+ 0.768366079 0.789436238 0.778901159 0.014898811 rudhira FBtr0305606 11832923 11834386 X + 11833883 11833934 3'utr rudhira FlyBase G60798.1 CACACACACACACACACATGCAGCTAAAGCTGTTTGCAGAACACACAGTTGG 19 11833901 0.997671864 3 19 32 1 1.322219295 0.523809524 0.105263158 0.19047619 19 0 0 21 X:11833883-11833934 7 rudhira FBtr0305606 11832923 11834386 GCAGCTA 7mer-A1 dme-miR-980-3p X + 11833886 11833927 3'utr rudhira FlyBase G45918.1 ACACACACACACACATGCAGCTAAAGCTGTTTGCAGAACACA 15 11833901 0.998622171 4 15 38 1 1.361727836 0.260869565 0.466666667 0.652173913 15 0 0 23 X:11833886-11833927 7 13.5 3147 FBgn0266019 2080.863333 30.08666667 46.56 0.006487692 0.448703745 0.289948454 1 1 1 0.2 dme-miR-1002-5p 7mer-m8 CTACTTA X 11836035 11836041 + X_11836035_11836041_+ 0.330254816 0.361388118 0.345821467 0.022014568 rudhira FBtr0305605 11835262 11837460 X + 11836011 11836083 3'utr rudhira FlyBase G60808.1 TATGTAATAGCATAATAGCTCCATCTACTTACCCTAGACTAAAGAAGCCCAAATTTCGCTTATTTTTCCAACT 20 11836064 0.983612219 7 17 133 0.875 0.84509804 0.083333333 0.15 0.291666667 20 1 2 21 X:11836011-11836083 7 rudhira FBtr0305605 11835262 11837460 CTACTTA 7mer-m8 dme-miR-1002-5p X + 11836031 11836066 3'utr rudhira FlyBase G45925.1 CCATCTACTTACCCTAGACTAAAGAAGCCCAAATTT 6 11836035 0.869792899 4 5 28 0.909090909 0.698970004 0.272727273 0.5 0.727272727 6 0 1 10 X:11836031-11836066 7 8 3148 FBgn0266019 2080.863333 30.08666667 46.56 0.003844558 0.265898515 0.171821306 -29 0 -14.5 0.2 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA X 11837104 11837110 + X_11837104_11837110_+ 0.709277587 0.765416537 0.737347062 0.039696197 rudhira FBtr0305605|FBtr0305605 11835262|11835262 11837460|11837460 X + 11837072 11837130 3'utr rudhira FlyBase G60815.1 AGACATATAGATACGCAAATTGGCAGAACATTTACTTAAAACCCATACCTAAATATATG 26 11837102 0.795662072 6 25 150 0.965517241 1.146128036 0.068965517 0.115384615 0.206896552 26 0 1 28 X:11837072-11837130 7 rudhira FBtr0305605|FBtr0305605 11835262|11835262 11837460|11837460 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" X + 11837080 11837118 3'utr rudhira FlyBase G45929.1 AGATACGCAAATTGGCAGAACATTTACTTAAAACCCATA 10 11837102 0.910907485 3 10 49 1 1.146128036 0 0.2 0.428571429 10 0 0 14 X:11837080-11837118 7 15 3149 FBgn0266019 2080.863333 30.08666667 46.56 0.007208546 0.498559716 0.322164948 2 2 2 0.2 dme-miR-283-5p 6mer3-8 TGATAT X 11864981 11864986 - X_11864981_11864986_- 0.999996256 0.996554305 0.998275281 0.002433862 CG2025 FBtr0073601 11864649 11865104 X - 11864971 11865031 3'utr CG2025 FlyBase G66823.1 GCCAAAGGTAGACGATTAGTTACACAGGAAGCAACCTTTTTCTCATGATATCCTCCTGACC 12 11864993 0.990955716 7 10 81 0.857142857 1.079181246 0.214285714 0.166666667 0.285714286 12 2 0 12 X:11864971-11865031 6 CG2025 FBtr0073601 11864649 11865104 TGATAT 6mer3-8 dme-miR-283-5p X - 11864949 11864993 3'utr CG2025 FlyBase G50323.1 TTTCTCATGATATCCTCCTGACCAAGTCGGGAATTTGCTCTTATG 5 11864992 0.954531376 3 4 41 0.8 0.602059991 0 0 0 5 1 0 4 X:11864949-11864993 6 6 3150 FBgn0030344 443.1533333 13.33 20.59 0.013539332 0.450112528 0.291403594 7 6 6.5 0.2 dme-miR-283-5p 7mer-m1 GATATTT X 11870950 11870956 + X_11870950_11870956_+ 0.754539124 0.68271404 0.718626582 0.050788015 CG1847 FBtr0330413|FBtr0073567 11870497|11870431 11871168|11871168 X + 11870932 11870974 3'utr CG1847 FlyBase G60830.1 TTGTATATCCCTATATGCGATATTTACTCGTAGCTAGAATCTA 17 11870945 0.78826669 5 17 164 1 1.397940009 0.12 0.352941176 0.56 17 0 0 25 X:11870932-11870974 7 CG1847 FBtr0330413|FBtr0073567 11870497|11870431 11871168|11871168 GATATTT 7mer-m1 dme-miR-283-5p X + 11870890 11870965 3'utr CG1847 FlyBase G45938.2 CACATTTGTTGTCCATAGTCGTATATGTATGTTTGTATTGTATTGTATATCCCTATATGCGATATTTACTCGTAGC 21 11870945 0.813196203 5 16 202 0.827586207 1.380211242 0.103448276 0.333333333 0.517241379 21 5 0 24 X:11870890-11870965 7 15 3151 FBgn0030345 101 6.976666667 10.73666667 0.148514851 2.150023889 1.397081652 5 5 5 0.2 dme-miR-305-3p 7mer-m1 TGTGCCG X 11877805 11877811 - X_11877805_11877811_- 0.801907185 0.714491601 0.758199393 0.061812164 CG10353 FBtr0331591|FBtr0331594|FBtr0344702|FBtr0114451|FBtr0308070|FBtr0114452|FBtr0344703 11877735|11877735|11877735|11877735|11877735|11877735|11877735 11878742|11878742|11878742|11878742|11878742|11878742|11878742 X - 11877793 11877827 3'utr CG10353 FlyBase G66853.1 AAAACAAATTGTGTTGTGTGCCGGATAAAAAAAAA 10 11877810 0.717539577 5 10 62 1 1.041392685 0.181818182 0.1 0.181818182 10 0 0 11 X:11877793-11877827 7 CG10353 FBtr0344702|FBtr0331594|FBtr0331591|FBtr0344703|FBtr0114452|FBtr0308070|FBtr0114451 11877735|11877735|11877735|11877735|11877735|11877735|11877735 11878742|11878742|11878742|11878742|11878742|11878742|11878742 TGTGCCG 7mer-m1 dme-miR-305-3p X - 11877795 11877826 3'utr CG10353 FlyBase G50343.1 AAACAAATTGTGTTGTGTGCCGGATAAAAAAA 5 11877812 0.662485519 3 5 35 1 0.903089987 0 0.6 0.75 5 0 0 8 X:11877795-11877826 7 7.5 3152 FBgn0030349 1118.516667 30.53 46.76333333 0.006705309 0.245660007 0.160382066 -1 1 0 0.2 dme-miR-11-3p 8mer-m1 CTGTGATG X 11889011 11889018 + X_11889011_11889018_+ 0.462132494 0.462251855 0.462192174 8.44E-05 CG1840 FBtr0073571|FBtr0331590 11888967|11888967 11889186|11889186 X + 11888997 11889035 3'utr CG1840 FlyBase G60837.2 AATCCAACTCACCTCTGTGATGCGGCAATTAAAATAGAT 20 11889010 0.797048552 4 15 96 0.814814815 1.041392685 0.259259259 0.2 0.407407407 20 4 1 22 X:11888997-11889035 8 CG1840 FBtr0073571|FBtr0331590 11888967|11888967 11889186|11889186 CTGTGATG 8mer-m1 dme-miR-11-3p X + 11888997 11889026 3'utr CG1840 FlyBase G45942.1 AATCCAACTCACCTCTGTGATGCGGCAATT 19 11889010 0.67823952 4 14 101 0.740740741 1.301029996 0.185185185 0.315789474 0.518518519 19 7 0 20 X:11888997-11889026 8 19 3153 FBgn0030351 18.33333333 3.326666667 5.123333333 1.036363636 5.711422846 3.708523097 1 1 1 0.2 dme-miR-184-3p 8mer-A1 TCCGTCCA X 11907593 11907600 - X_11907593_11907600_- 0.631000417 0.63107363 0.631037024 5.18E-05 pot FBtr0073595|FBtr0305609 11907407|11907407 11908579|11908579 X - 11907574 11907650 3'utr pot FlyBase G66883.1 TACGATATACTTTCTCATGATAATCAATTTTCGCGTAACATTAGTACTAATCCGTCCAAGACATATACTATAAGTTT 79 11907602 0.78841305 10 71 591 0.905263158 1.33243846 0.210526316 0.151898734 0.294736842 79 6 3 86 X:11907574-11907650 8 pot FBtr0305609|FBtr0073595 11907407|11907407 11908579|11908579 TCCGTCCA 8mer-A1 dme-miR-184-3p X - 11907574 11907649 3'utr pot FlyBase G50359.1 ACGATATACTTTCTCATGATAATCAATTTTCGCGTAACATTAGTACTAATCCGTCCAAGACATATACTATAAGTTT 62 11907604 0.75493953 7 57 431 0.91011236 1.607455023 0.269662921 0.322580645 0.528089888 62 7 1 81 X:11907574-11907649 8 46 3154 FBgn0250871 1 0.03 0.05 46 1533.333333 920 2 4 3 0.2 dme-miR-308-3p 7mer-m1 TGTGATT X 12023151 12023157 - X_12023151_12023157_- 0.521062915 0.518123831 0.519593373 0.002078258 Usp7 FBtr0073641 12022835 12024307 X - 12023099 12023208 3'utr Usp7 FlyBase G66898.1 AGGCGTATGTATGGGAGATGAAAAATATAAGATTTGTTTCAAACAATTATTTGTGATTTTTAAACATGAAATGATAAAAATGTATGCAAAGGACTAGACAACATAAAATT 107 12023159 0.87340866 16 105 935 0.9765625 1.619788758 0.171875 0.168224299 0.3046875 107 1 2 125 X:12023099-12023208 7 Usp7 FBtr0073641 12022835 12024307 TGTGATT 7mer-m1 dme-miR-308-3p X - 12023087 12023202 3'utr Usp7 FlyBase G50369.1 ATGTATGGGAGATGAAAAATATAAGATTTGTTTCAAACAATTATTTGTGATTTTTAAACATGAAATGATAAAAATGTATGCAAAGGACTAGACAACATAAAATTAATTAATAAATT 59 12023159 0.918033586 14 59 461 1 1.949390007 0.06741573 0.389830508 0.595505618 59 0 0 89 X:12023087-12023202 7 46 3155 FBgn0030366 4316.233333 92.58333333 142.4366667 0.010657441 0.496849685 0.322950551 2 2 2 0.2 dme-miR-278-3p 6mer3-8 CCCACC X 1220356 1220361 - X_1220356_1220361_- 0.953916988 0.969676139 0.961796564 0.011143366 CG3638 FBtr0070249|FBtr0308707|FBtr0330207|FBtr0346960|FBtr0336978 1215712|1217947|1217081|1217081|1215287 1221459|1221459|1221459|1221459|1221459 X - 1220330 1220399 3'utr CG3638 FlyBase G63959.1 ATCCCGCCTCCATTGTGAACCAACCGTTGCCCGAGATTCCCACCAATCAACAACAGTCAAAGATCTCCGC 6 1220363 0.945988905 3 6 24 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 X:1220330-1220399 6 CG3638 FBtr0346960|FBtr0336978|FBtr0330207|FBtr0070249|FBtr0308707 1217081|1215287|1217081|1215712|1217947 1221459|1221459|1221459|1221459|1221459 CCCACC 6mer3-8 dme-miR-278-3p X - 1220345 1220378 3'utr CG3638 FlyBase G48215.1 AACCGTTGCCCGAGATTCCCACCAATCAACAACA 5 1220363 0.796871475 2 4 16 0.857142857 0.77815125 0 0.2 0.428571429 5 1 0 6 X:1220345-1220378 6 3.5 3156 FBgn0261444 352.62 5.606666667 8.55 0.009925699 0.624256837 0.409356725 2 2 2 0.2 dme-miR-14-3p 6mer2-7 AGACTG X 12331843 12331848 + X_12331843_12331848_+ 0.981918027 0.982200891 0.982059459 0.000200041 Ten-a FBtr0300203|FBtr0299860|FBtr0300201|FBtr0346129|FBtr0308222|FBtr0299858|FBtr0308221|FBtr0346335|FBtr0308223|FBtr0299859|FBtr0310078 12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182 12332165|12332165|12332165|12335214|12332165|12332165|12332165|12332165|12332165|12332165|12335214 X + 12331825 12331869 3'utr Ten-a FlyBase G60869.1 TGGTACTCGAGCTTTTTGAGACTGGCATAGTTTTAAACAAAACCA 140 12331841 0.790078963 9 134 1296 0.941558442 1.860338007 0.012987013 0.078571429 0.162337662 140 8 1 145 X:12331825-12331869 6 Ten-a FBtr0310078|FBtr0308223|FBtr0299859|FBtr0346335|FBtr0308221|FBtr0299858|FBtr0308222|FBtr0346129|FBtr0300201|FBtr0299860|FBtr0300203 12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182 12335214|12332165|12332165|12332165|12332165|12332165|12332165|12335214|12332165|12332165|12332165 AGACTG 6mer2-7 dme-miR-14-3p X + 12331825 12331867 3'utr Ten-a FlyBase G45964.1 TGGTACTCGAGCTTTTTGAGACTGGCATAGTTTTAAACAAAAC 72 12331841 0.789914029 6 68 692 0.943396226 2 0.018867925 0.375 0.575471698 72 6 0 100 X:12331825-12331867 6 106 3157 FBgn0267001 445.45 3.99 6.113333333 0.237961612 26.56641604 17.3391494 2 2 2 0.2 dme-miR-1007-3p 6mer3-8 TGAGCT X 12460293 12460298 - X_12460293_12460298_- 0.483180278 0.910637026 0.696908652 0.302257531 Rab40 FBtr0073668|FBtr0339841|FBtr0073669 12459794|12459794|12459794 12460365|12460365|12460365 X - 12460267 12460313 3'utr Rab40 FlyBase G66931.1 GACATTAACTTTAATTGAGCTCTACTTATGTACTCTAGGCTATAACA 26 12460298 0.783987042 5 25 232 0.972972973 1.556302501 0.216216216 0.384615385 0.567567568 26 1 0 36 X:12460267-12460313 6 Rab40 FBtr0073669|FBtr0339841|FBtr0073668 12459794|12459794|12459794 12460365|12460365|12460365 TGAGCT 6mer3-8 dme-miR-1007-3p X - 12460273 12460309 3'utr Rab40 FlyBase G50395.1 TTAACTTTAATTGAGCTCTACTTATGTACTCTAGGCT 13 12460299 0.97318688 4 12 112 0.952380952 1.301029996 0 0.384615385 0.619047619 13 1 0 20 X:12460273-12460309 6 18.5 3158 FBgn0030391 73.34 5.683333333 8.663333333 0.252249795 3.255131965 2.135436706 0 1 0.5 0.2 dme-miR-283-5p 7mer-m1 GATATTT X 12584651 12584657 - X_12584651_12584657_- 0.477370992 0.598944505 0.538157748 0.085965446 LIMK1 FBtr0073660|FBtr0073661 12584383|12584383 12585938|12585938 X - 12584621 12584798 3'utr LIMK1 FlyBase G66954.1 ATATAGGATCGAAACGCTTGCAATTAACTGCTTACATAAGACATTTGAGTCGGGCCCTTGTTATACGGACGTATGCCAGTAGAACAGTGGCCGCGCCGAACCGATCTAGCATTTAACTATCTATATACAACAAATATGTGCGATATTTTTTATATGCAGCTAATTTAATGTGTTGTAT 69 12584662 0.986754341 15 68 584 0.987951807 1.913813852 0.036144578 0.173913043 0.313253012 69 1 0 82 X:12584621-12584798 7 LIMK1 FBtr0073661|FBtr0073660 12584383|12584383 12585938|12585938 GATATTT 7mer-m1 dme-miR-283-5p X - 12584633 12584676 3'utr LIMK1 FlyBase G50411.1 ATATACAACAAATATGTGCGATATTTTTTATATGCAGCTAATTT 27 12584662 0.974713499 4 26 219 0.972972973 1.556302501 0 0.333333333 0.513513514 27 1 0 36 X:12584633-12584676 7 39.5 3159 FBgn0041203 1320 31.21333333 47.99333333 0.029924242 1.265484836 0.823030977 5 5 5 0.2 dme-miR-184-3p 6mer2-7 CCGTCC X 12585050 12585055 - X_12585050_12585055_- 0.576746009 0.999965996 0.788356003 0.299261732 LIMK1 FBtr0073660|FBtr0073661|FBtr0301831|FBtr0073659 12584383|12584383|12584943|12584943 12585938|12585938|12585938|12585938 X - 12585025 12585155 3'utr LIMK1 FlyBase G66957.1 AAATGTATTTGTATATCTATTCCATAATTATATAGATAAACGTATTCCATGTTAGTGCTTAAATCTAATTTATTATTTATCGATTCTCGACCCATTCACCCCGTCCCCTCATTCCAAGAACAATAATTAAC 17 12585046 0.990507784 9 11 123 0.65 0.636822098 0.05 0.176470588 0.3 17 5 2 13 X:12585025-12585155 6 LIMK1 FBtr0073659|FBtr0301831|FBtr0073661|FBtr0073660 12584943|12584943|12584383|12584383 12585938|12585938|12585938|12585938 CCGTCC 6mer2-7 dme-miR-184-3p X - 12585034 12585080 3'utr LIMK1 FlyBase G50414.1 TTTATCGATTCTCGACCCATTCACCCCGTCCCCTCATTCCAAGAACA 8 12585061 0.678903619 5 8 40 1 1.079181246 0 0.375 0.583333333 8 0 0 12 X:12585034-12585080 6 8 3160 FBgn0041203 1320 31.21333333 47.99333333 0.006060606 0.256300726 0.166689818 -9 6 -1.5 0.2 dme-miR-263a-5p 7mer-m8 GTGCCAT X 12585296 12585302 - X_12585296_12585302_- 0.649771974 0.647250235 0.648511105 0.001783182 LIMK1 FBtr0073660|FBtr0073661|FBtr0301831|FBtr0073659 12584383|12584383|12584943|12584943 12585938|12585938|12585938|12585938 X - 12585283 12585328 3'utr LIMK1 FlyBase G66959.1 CGGATAAAGAGAGAAGGAAGAAACTTGTGCCATGATGTTGATGCGA 27 12585303 0.953136275 2 27 123 1 1.462397998 0.517241379 0.037037037 0.103448276 27 0 0 29 X:12585283-12585328 7 LIMK1 FBtr0073659|FBtr0301831|FBtr0073661|FBtr0073660 12584943|12584943|12584383|12584383 12585938|12585938|12585938|12585938 GTGCCAT 7mer-m8 dme-miR-263a-5p X - 12585280 12585321 3'utr LIMK1 FlyBase G50416.1 AGAGAGAAGGAAGAAACTTGTGCCATGATGTTGATGCGAAAA 13 12585303 0.946782185 2 13 57 1 1.278753601 0.210526316 0.307692308 0.526315789 13 0 0 19 X:12585280-12585321 7 20 3161 FBgn0041203 1320 31.21333333 47.99333333 0.015151515 0.640751815 0.416724545 1 1 1 0.2 dme-miR-317-3p 6mer3-8 TGTGTT X 12609712 12609717 + X_12609712_12609717_+ 0.986777527 0.890818866 0.938798197 0.067852977 Sec16 FBtr0340106|FBtr0310304|FBtr0113445|FBtr0340104 12608756|12608756|12608756|12608756 12609910|12609910|12609910|12609910 X + 12609661 12609767 3'utr Sec16 FlyBase G60909.1 AGAAGCAAATGAATTGTTCTCCCTGGTTTCTCTTATCAATGTATTCTCCTCTGTGTTTCTTTTTTACAATTGGTGTGAAATATGCAAATGATTCCAATTATATATAT 21 12609687 0.901102045 13 21 204 1 1.380211242 0.041666667 0.095238095 0.208333333 21 0 0 24 X:12609661-12609767 6 Sec16 FBtr0340104|FBtr0113445|FBtr0310304|FBtr0340106 12608756|12608756|12608756|12608756 12609910|12609910|12609910|12609910 TGTGTT 6mer3-8 dme-miR-317-3p X + 12609660 12609721 3'utr Sec16 FlyBase G45985.1 AAGAAGCAAATGAATTGTTCTCCCTGGTTTCTCTTATCAATGTATTCTCCTCTGTGTTTCTT 9 12609704 0.964568856 6 6 99 0.769230769 0.698970004 0.153846154 0.444444444 0.615384615 9 2 1 10 X:12609660-12609721 6 5.5 3162 FBgn0052654 1220.54 20.34 31.29 0.004506202 0.270403147 0.175775008 25 8 16.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 12679537 12679542 + X_12679537_12679542_+ 0.493093067 0.510142209 0.501617638 0.012055534 Tis11 FBtr0073683|FBtr0073683|FBtr0073683|FBtr0345165|FBtr0345165|FBtr0345165|FBtr0333756|FBtr0333756|FBtr0333756 12679239|12679239|12679239|12679239|12679239|12679239|12679239|12679239|12679239 12679702|12679702|12679702|12679702|12679702|12679702|12682554|12682554|12682554 X + 12679484 12679593 5'utr Tis11 FlyBase G60958.1 AACACAGACACCCCTTAATTATGAACCGATCCTTGATATCAATTCTCTCATTGCTGTGACAGTCAAACGTAATCGTTATACAATAATCGTTATATGAGAAGGACCGAATT 389 12679534 0.918152102 20 381 3064 0.979638009 2.335457901 0.088235294 0.12596401 0.230769231 389 8 1 433 X:12679484-12679593 6 Tis11 FBtr0333756|FBtr0333756|FBtr0333756|FBtr0345165|FBtr0345165|FBtr0345165|FBtr0073683|FBtr0073683|FBtr0073683 12679239|12679239|12679239|12679239|12679239|12679239|12679239|12679239|12679239 12682554|12682554|12682554|12679702|12679702|12679702|12679702|12679702|12679702 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X + 12679489 12679561 5'utr Tis11 FlyBase G46019.1 AGACACCCCTTAATTATGAACCGATCCTTGATATCAATTCTCTCATTGCTGTGACAGTCAAACGTAATCGTTA 239 12679534 0.755531465 11 224 1903 0.942558747 1.955447211 0.093994778 0.426778243 0.64229765 239 19 3 361 X:12679489-12679561 6 274.5 3163 FBgn0011837 4912.7 119.65 184.0333333 0.055875588 2.294191392 1.491577613 3 3 3 0.2 dme-miR-970-3p 8mer-A1 TCTTATGA X 12679763 12679770 + X_12679763_12679770_+ 0.609907916 0.610193126 0.610050521 0.000201667 Tis11 FBtr0333756 12679239 12682554 X + 12679737 12679822 3'utr Tis11 FlyBase G60960.1 ATGAATGCTATAGCTAAACAAAACATTCTTATGAACTGGACAAGATACAAAGACGGAGATAACGAAAAGGACTATTTGGGAATCTT 927 12679762 0.862003026 11 920 5440 0.991493384 2.543654233 0.396975425 0.116504854 0.225897921 927 7 2 1049 X:12679737-12679822 8 Tis11 FBtr0333756 12679239 12682554 TCTTATGA 8mer-A1 dme-miR-970-3p X + 12679723 12679841 3'utr Tis11 FlyBase G46021.1 AAAACATAGCTAGCATGAATGCTATAGCTAAACAAAACATTCTTATGAACTGGACAAGATACAAAGACGGAGATAACGAAAAGGACTATTTGGGAATCTTCAGCGAATGTTGCTCAAAT 594 12679762 0.972471895 9 590 3508 0.995348837 2.330413773 0.404651163 0.326599327 0.534883721 594 1 3 856 X:12679723-12679841 8 751 3164 FBgn0011837 4912.7 119.65 184.0333333 0.152869094 6.276640201 4.080782467 1 1 1 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA X 12679888 12679895 + X_12679888_12679895_+ 0.607930829 0.62275123 0.61534103 0.010479605 Tis11 FBtr0333756 12679239 12682554 X + 12679836 12679962 3'utr Tis11 FlyBase G60961.1 TCAAATCAAATCAACAAACCCCACGGCCAACGACGAATGTGAAAATCGTTCCTGCATTTATAGAAACTACTGCAGTGCATCCATTAGTAAAACCCATGCACACGCACACCTGTCGCTTTTGTTCAAT 32 12679896 0.978553899 11 30 194 0.944444444 1.531478917 0.138888889 0.125 0.222222222 32 2 0 34 X:12679836-12679962 8 Tis11 FBtr0333756 12679239 12682554 TGCATTTA 8mer-A1 dme-miR-277-3p X + 12679865 12679917 3'utr Tis11 FlyBase G46022.1 ACGACGAATGTGAAAATCGTTCCTGCATTTATAGAAACTACTGCAGTGCATCC 14 12679888 0.837078106 7 12 98 0.857142857 1.255272505 0.238095238 0.357142857 0.571428571 14 3 0 18 X:12679865-12679917 8 16.5 3165 FBgn0011837 4912.7 119.65 184.0333333 0.003358642 0.137902215 0.089657671 -8 0 -4 0.2 dme-miR-7-5p 8mer-A1 GTCTTCCA X 12680143 12680150 + X_12680143_12680150_+ 0.658443323 0.654894268 0.656668796 0.002509522 Tis11 FBtr0333756 12679239 12682554 X + 12680054 12680168 3'utr Tis11 FlyBase G60963.1 ATATATATATATGCATATTTGGCCACCACCTGTGTATATATAACTTTTGATGTGGATAAATAGAGAGCGAGATAGAGAGTTGGTCCGATGTCTTCCAATCCAAGCCAAGCCAAGC 83 12680142 0.982557211 11 81 606 0.980392157 2 0.029411765 0.180722892 0.333333333 83 2 0 100 X:12680054-12680168 8 Tis11 FBtr0333756 12679239 12682554 GTCTTCCA 8mer-A1 dme-miR-7-5p X + 12680118 12680169 3'utr Tis11 FlyBase G46024.1 GAGCGAGATAGAGAGTTGGTCCGATGTCTTCCAATCCAAGCCAAGCCAAGCC 46 12680142 0.980509136 4 45 321 0.985507246 1.832508913 0.15942029 0.326086957 0.550724638 46 1 0 68 X:12680118-12680169 8 57.5 3166 FBgn0011837 4912.7 119.65 184.0333333 0.011704358 0.480568324 0.312443398 1 1 1 0.2 dme-miR-92b-3p 7mer-m1 TGCAATT X 12680654 12680660 + X_12680654_12680660_+ 0.765513918 0.689676036 0.727594977 0.053625493 Tis11 FBtr0333756 12679239 12682554 X + 12680625 12680694 3'utr Tis11 FlyBase G60967.1 TACATAAAACATACCAGATATATTTTATATGCAATTAATGTTAATAATTTATGAAAACAACACATGCGAC 10 12680636 0.987055853 7 9 76 0.933333333 1.146128036 0 0.5 0.666666667 10 1 0 14 X:12680625-12680694 7 Tis11 FBtr0333756 12679239 12682554 TGCAATT 7mer-m1 dme-miR-92b-3p X + 12680616 12680661 3'utr Tis11 FlyBase G46029.1 ACATCTATTTACATAAAACATACCAGATATATTTTATATGCAATTA 6 12680648 0.987143297 5 5 48 0.833333333 0.698970004 0 0 0 6 1 0 5 X:12680616-12680661 7 4 3167 FBgn0011837 4912.7 119.65 184.0333333 0.000814216 0.03343084 0.021735193 18 6 12 0.2 dme-miR-980-3p 6mer3-8 GGCAGC X 12681817 12681822 + X_12681817_12681822_+ 0.9498343 0.920401607 0.935117954 0.020812062 Tis11 FBtr0333756 12679239 12682554 X + 12681726 12681857 3'utr Tis11 FlyBase G60974.2 ACTTTGATTTTTACTTCCCATCGCAAAAAAACCCATTGTTTTCGTACTCCAATACGTATTGCAATCGAAATTGAACCGATTGGAATGTTATGGCAGCGTGCAAAAGTTTACTGTAATACCTATATTTAACAT 146 12681816 0.964546533 21 143 911 0.982142857 1.916453949 0.119047619 0.136986301 0.25 146 2 1 165 X:12681726-12681857 6 Tis11 FBtr0333756 12679239 12682554 GGCAGC 6mer3-8 dme-miR-980-3p X + 12681780 12681871 3'utr Tis11 FlyBase G46036.1 CGTATTGCAATCGAAATTGAACCGATTGGAATGTTATGGCAGCGTGCAAAAGTTTACTGTAATACCTATATTTAACATACTTATATATAATA 85 12681816 0.980100671 11 79 549 0.940397351 1.851258349 0.17218543 0.529411765 0.735099338 85 8 1 142 X:12681780-12681871 6 96 3168 FBgn0011837 4912.7 119.65 184.0333333 0.019541189 0.802340159 0.52164463 1 1 1 0.2 dme-miR-1007-3p 7mer-m8 TGAGCTT X 12681920 12681926 + X_12681920_12681926_+ 0.510176197 0.541554032 0.525865115 0.022187455 Tis11 FBtr0333756 12679239 12682554 X + 12681898 12681958 3'utr Tis11 FlyBase G60975.1 TTTAAAAAGCCTAACTTAGACCTGAGCTTTGGTTATCATCATGATGATTATTCTTATATTT 29 12681914 0.948881574 8 25 238 0.888888889 1.204119983 0.055555556 0.206896552 0.361111111 29 3 1 32 X:12681898-12681958 7 Tis11 FBtr0333756 12679239 12682554 TGAGCTT 7mer-m8 dme-miR-1007-3p X + 12681897 12681939 3'utr Tis11 FlyBase G46037.1 TTTTAAAAAGCCTAACTTAGACCTGAGCTTTGGTTATCATCAT 15 12681914 0.914918541 5 14 93 1 1.361727836 0.086956522 0.5 0.695652174 14 0 0 23 X:12681897-12681939 7 20.5 3169 FBgn0011837 4912.7 119.65 184.0333333 0.004172858 0.171333055 0.111392864 6 6 6 0.2 dme-miR-283-5p 6mer3-8 TGATAT X 12682267 12682272 + X_12682267_12682272_+ 0.777985983 0.636183207 0.707084595 0.100269721 Tis11 FBtr0333756 12679239 12682554 X + 12682255 12682290 3'utr Tis11 FlyBase G60977.1 AATATTTTTCATTGATATCCGCCTTGGCAACAACAA 33 12682267 0.719034318 5 32 269 1 1.568201724 0.054054054 0.090909091 0.189189189 33 0 0 37 X:12682255-12682290 6 Tis11 FBtr0333756 12679239 12682554 TGATAT 6mer3-8 dme-miR-283-5p X + 12682246 12682291 3'utr Tis11 FlyBase G46041.1 ATATACCATAATATTTTTCATTGATATCCGCCTTGGCAACAACAAA 24 12682267 0.886689218 4 22 204 0.941176471 1.505149978 0.029411765 0.333333333 0.529411765 24 2 0 32 X:12682246-12682291 6 28 3170 FBgn0011837 4912.7 119.65 184.0333333 0.005699514 0.23401588 0.15214635 0 0 0 0.2 dme-miR-14-3p 6mer3-8 AAGACT X 12685370 12685375 - X_12685370_12685375_- 0.999582242 0.981560077 0.990571159 0.012743549 Smr FBtr0333768|FBtr0333767 12684201|12684201 12687299|12687299 X - 12685328 12685399 3'utr Smr FlyBase G66986.1 TATATGAAGTAAACAACAAACGCTAAGACTTATTCAACAAAACAAAAATTGTAAAATATTAAAAGATAAACG 45 12685367 0.950580424 4 43 191 0.947368421 1.73239376 0.052631579 0.266666667 0.421052632 45 3 0 54 X:12685328-12685399 6 Smr FBtr0333767|FBtr0333768 12684201|12684201 12687299|12687299 AAGACT 6mer3-8 dme-miR-14-3p X - 12685353 12685397 3'utr Smr FlyBase G50432.1 TATGAAGTAAACAACAAACGCTAAGACTTATTCAACAAAACAAAA 35 12685367 0.945735132 3 34 144 0.966666667 1.763427994 0 0.571428571 0.75 35 2 0 58 X:12685353-12685397 6 39.5 3171 FBgn0265523 12357.95 106.01 163.76 0.003196323 0.372606358 0.241206644 -8 -8 -8 0.2 dme-miR-317-3p 6mer3-8 TGTGTT X 12685739 12685744 - X_12685739_12685744_- 0.799372577 0.882683945 0.841028261 0.058909985 Smr FBtr0333768|FBtr0333767 12684201|12684201 12687299|12687299 X - 12685708 12685756 3'utr Smr FlyBase G66987.1 ATGGAGCAAGATTGTGTTTTATTCCCTTCTTAGGCAAGCGCTATTGAAT 18 12685745 0.843340023 5 18 161 1 1.278753601 0.105263158 0.055555556 0.105263158 18 0 0 19 X:12685708-12685756 6 Smr FBtr0333767|FBtr0333768 12684201|12684201 12687299|12687299 TGTGTT 6mer3-8 dme-miR-317-3p X - 12685681 12685771 3'utr Smr FlyBase G50433.1 TGCAAGGCCTAATTTATGGAGCAAGATTGTGTTTTATTCCCTTCTTAGGCAAGCGCTATTGAATTATGTACGTTTAATTGCTAAGCTAATG 12 12685745 0.987012027 7 12 110 1 1.361727836 0.304347826 0.5 0.739130435 12 0 0 23 X:12685681-12685771 6 12.5 3172 FBgn0265523 12357.95 106.01 163.76 0.001011495 0.117913404 0.076331216 1 1 1 0.2 dme-miR-1008-3p 7mer-A1 GCTGTGA X 12774791 12774797 - X_12774791_12774797_- 0.805697503 0.798243477 0.80197049 0.005270774 CG32647 FBtr0346126|FBtr0340412 12771842|12773579 12776672|12776672 X - 12774770 12774891 3'utr CG32647 FlyBase G67064.1 ATTTTTTTCCACTTGACAGCACATCAAAGCAAATTAAATTTAACAATAAATACATATATAAAATGCGGGATATCCGAGAAAAACGTGGAGTACGGCTGTGAAATTATGTTTGCTTTAAAATA 43 12774801 0.980161692 13 36 262 0.826086957 1.102662342 0.347826087 0.069767442 0.130434783 43 6 2 38 X:12774770-12774891 7 CG32647 FBtr0340412|FBtr0346126 12773579|12771842 12776672|12776672 GCTGTGA 7mer-A1 dme-miR-1008-3p X - 12774762 12774816 3'utr CG32647 FlyBase G50491.1 GAGAAAAACGTGGAGTACGGCTGTGAAATTATGTTTGCTTTAAAATACATAAACG 22 12774803 0.983087058 5 15 117 0.636363636 1.021189299 0.363636364 0.272727273 0.515151515 22 11 1 21 X:12774762-12774816 7 25.5 3173 FBgn0052647 26.80666667 0.936666667 1.47 0.951255906 27.22419929 17.34693878 4 6 5 0.2 dme-miR-1008-3p 6mer3-8 AGCTGT X 12911753 12911758 + X_12911753_12911758_+ 0.972394276 1 0.986197138 0.019520178 CG4645 FBtr0343649|FBtr0346316|FBtr0073692 12911708|12911708|12911708 12911897|12912070|12911897 X + 12911722 12911763 3'utr CG4645 FlyBase G60994.1 GAGAAACCAGTTCGTCAACGTCGCTGAACTAAGCTGTAAATT 5 12911733 0.91649001 5 5 29 1 0.698970004 0 0 0 5 0 0 5 X:12911722-12911763 6 CG4645 FBtr0346316 12911708 12912070 AGCTGT 6mer3-8 dme-miR-1008-3p X + 12911708 12911758 stop_codon CG4645 FlyBase G46056.1 AGGATGCATTCCGCGAGAAACCAGTTCGTCAACGTCGCTGAACTAAGCTGT 8 12911745 0.975208718 6 6 38 0.833333333 1 0.083333333 0.25 0.5 8 2 0 10 X:12911708-12911758 6 3 3174 FBgn0030435 142.39 10.84666667 16.51 0.021068895 0.276582667 0.181708056 20 8 14 0.2 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 13081902 13081909 - X_13081902_13081909_- 0.630684567 0.600078513 0.61538154 0.021641781 hep FBtr0330397 13079729 13084554 X - 13081888 13081925 5'utr hep FlyBase G67104.1 ATCAACGCACTCCACCTCTAGTCAGTCCTCCACGCAGT 42 13081900 0.696249877 3 40 212 0.957446809 1.653212514 0.106382979 0.095238095 0.191489362 42 2 0 45 X:13081888-13081925 8 hep FBtr0330397 13079729 13084554 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X - 13081891 13081923 5'utr hep FlyBase G50515.1 CAACGCACTCCACCTCTAGTCAGTCCTCCACGC 19 13081900 0.734519201 4 19 94 1 1.51851394 0.121212121 0.421052632 0.666666667 19 0 0 33 X:13081891-13081923 8 30.5 3175 FBgn0010303 1946.036667 56.33 86.79333333 0.01567288 0.541452157 0.351409478 -9 -9 -9 0.2 dme-miR-1003-3p 7mer-A1 TGTGAGA X 13123232 13123238 - X_13123232_13123238_- 0.812593948 0.800253819 0.806423883 0.008725768 CG32638 FBtr0300453 13122874 13123472 X - 13123132 13123255 3'utr CG32638 FlyBase G67119.1 TTTTGTTAGTGCAATATTGTGAGAGAGACAACGATTAAGGTTAAGCATTGTAGTTAAATACGGCATCGGAATTTCATAAAGAAACGTGTAGGTGCGTGTTTTCCTTGTCCCATATACACAAACC 23 13123239 0.981113858 9 19 142 0.875 1.322219295 0.25 0.043478261 0.083333333 23 3 0 21 X:13123132-13123255 7 CG32638 FBtr0300453 13122874 13123472 TGTGAGA 7mer-A1 dme-miR-1003-3p X - 13123186 13123248 3'utr CG32638 FlyBase G50525.1 AGTGCAATATTGTGAGAGAGACAACGATTAAGGTTAAGCATTGTAGTTAAATACGGCATCGGA 14 13123239 0.891319201 6 13 73 0.95 0.977723605 0.35 0.357142857 0.55 14 0 1 19 X:13123186-13123248 7 11.5 3176 FBgn0052638 822.99 64.44 99.11666667 0.013973438 0.178460583 0.116024886 1 1 1 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA X 13123358 13123364 - X_13123358_13123364_- 0.806582184 0.806381749 0.806481966 0.000141775 CG32638 FBtr0300453 13122874 13123472 X - 13123321 13123436 3'utr CG32638 FlyBase G67120.1 ACACCACTACGATAATAGACAGCGGATTCCGCAATGGAACAGCAAAGACAACCCATGTGTAGAAAGACTTGACTAGTCAGTGTCGCTGCCGAAAGTAATCAGAATATTTGAATGCG 68 13123368 0.970191694 12 66 376 0.976190476 1.612783857 0.19047619 0.147058824 0.30952381 68 1 1 82 X:13123321-13123436 7 CG32638 FBtr0300453 13122874 13123472 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X - 13123331 13123391 3'utr CG32638 FlyBase G50526.1 AGACAACCCATGTGTAGAAAGACTTGACTAGTCAGTGTCGCTGCCGAAAGTAATCAGAATA 49 13123368 0.783315048 6 48 282 0.963855422 1.903089987 0.228915663 0.367346939 0.626506024 49 3 0 80 X:13123331-13123391 7 51 3177 FBgn0052638 822.99 64.44 99.11666667 0.061969161 0.791433892 0.514545149 4 4 4 0.2 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA X 13134356 13134362 + X_13134356_13134362_+ 0.81979766 0.796940595 0.808369127 0.01616241 CG15717 FBtr0339676 13129976 13134565 X + 13134274 13134385 3'utr CG15717 FlyBase G61016.1 CATCAATCATCGCGAGACTCTGACACAGTGGCATCTGGTCTTCTGGCTGGCGGCGGGCTTGAATATAGCCGGTAACTTCATCTACCTGATCTTCGCCAGCGCCGAGGAGCAA 39 13134354 0.983614642 12 37 285 0.953488372 1.311753861 0.302325581 0.102564103 0.186046512 39 1 1 41 X:13134274-13134385 7 CG15717 FBtr0339676 13129976 13134565 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" X + 13134300 13134382 3'utr CG15717 FlyBase G46077.1 AGTGGCATCTGGTCTTCTGGCTGGCGGCGGGCTTGAATATAGCCGGTAACTTCATCTACCTGATCTTCGCCAGCGCCGAGGAG 19 13134354 0.98484249 9 17 136 0.892857143 1.397940009 0.535714286 0.368421053 0.571428571 19 3 0 25 X:13134300-13134382 7 22.5 3178 FBgn0030451 195.7633333 20.76333333 31.87333333 0.1149347 1.083641034 0.705919264 2 2 2 0.2 dme-miR-282-5p 6mer3-8 AGAGGC X 13195603 13195608 - X_13195603_13195608_- 0.99999467 0.998005975 0.999000323 0.001406223 sno FBtr0340488|FBtr0340489 13195497|13195497 13196279|13196279 X - 13195588 13195632 3'utr sno FlyBase G67136.1 TGTAAGTTTAACCAACAGACATTGAGAGGCATCTGAATATAAGTT 14 13195610 0.624036428 4 13 66 1 1.255272505 0 0.214285714 0.388888889 14 0 0 18 X:13195588-13195632 6 sno FBtr0340488|FBtr0340489 13195497|13195497 13196279|13196279 AGAGGC 6mer3-8 dme-miR-282-5p X - 13195582 13195629 3'utr sno FlyBase G50540.1 AAGTTTAACCAACAGACATTGAGAGGCATCTGAATATAAGTTAAGAAA 10 13195610 0.954004645 3 10 51 1 1.176091259 0 0.4 0.6 10 0 0 15 X:13195582-13195629 6 11.5 3179 FBgn0265630 1551.576667 31.13333333 47.87666667 0.007411816 0.369379015 0.240200515 2 2 2 0.2 dme-miR-92b-3p 8mer-A1 GTGCAATA X 13263983 13263990 - X_13263983_13263990_- 0.627920387 0.628731207 0.628325797 0.000573322 HDAC4 FBtr0308576|FBtr0333331|FBtr0301299|FBtr0073798|FBtr0301298|FBtr0333333|FBtr0333332|FBtr0333334 13263753|13262685|13263753|13263753|13262887|13262887|13262887|13262887 13264981|13264981|13264981|13264981|13264981|13264981|13264981|13264981 X - 13263968 13264002 3'utr HDAC4 FlyBase G67160.1 AAAATATATATTGTGCAATAAATGTGAGAAAATGA 6 13263991 0.724042958 4 6 35 1 0.77815125 0.333333333 0 0 6 0 0 6 X:13263968-13264002 8 HDAC4 FBtr0333334|FBtr0333332|FBtr0333333|FBtr0301298|FBtr0073798|FBtr0301299|FBtr0333331|FBtr0308576 13262887|13262887|13262887|13262887|13263753|13263753|13262685|13263753 13264981|13264981|13264981|13264981|13264981|13264981|13264981|13264981 GTGCAATA 8mer-A1 dme-miR-92b-3p X - 13263970 13264004 3'utr HDAC4 FlyBase G50550.1 AAAAAATATATATTGTGCAATAAATGTGAGAAAAT 5 13263992 0.901998704 3 5 37 1 0.903089987 0 0.4 0.625 5 0 0 8 X:13263970-13264004 8 5.5 3180 FBgn0041210 5130.7 102.1166667 156.9133333 0.001071978 0.053859964 0.035051196 1 2 1.5 0.2 dme-miR-980-3p 6mer3-8 GGCAGC X 13287558 13287563 + X_13287558_13287563_+ 0.999203723 0.992752951 0.995978337 0.004561334 CG15743 FBtr0346123|FBtr0333330|FBtr0073755 13287493|13287493|13287493 13287741|13287741|13287741 X + 13287535 13287584 3'utr CG15743 FlyBase G61049.1 AATCCCCTCGCCCACATCGTTTAGGCAGCATTCAAAAATAGCTTTAAGTT 41 13287556 0.770775241 6 40 263 0.97826087 1.653212514 0.043478261 0.097560976 0.195652174 41 1 0 45 X:13287535-13287584 6 CG15743 FBtr0073755|FBtr0333330|FBtr0346123 13287493|13287493|13287493 13287741|13287741|13287741 GGCAGC 6mer3-8 dme-miR-980-3p X + 13287516 13287577 3'utr CG15743 FlyBase G46096.1 TTCTAACCCTTCCCGAGGAAATCCCCTCGCCCACATCGTTTAGGCAGCATTCAAAAATAGCT 29 13287556 0.978587066 5 29 184 1 1.69019608 0 0.448275862 0.673469388 29 0 0 49 X:13287516-13287577 6 33 3181 FBgn0030465 244.6633333 20.01333333 30.50666667 0.134879222 1.648900733 1.081730769 2 2 2 0.2 dme-miR-307a-3p 7mer-m8 GGTTGTG X 13287661 13287667 + X_13287661_13287667_+ 0.686955029 0.686658584 0.686806806 0.000209586 CG15743 FBtr0346123|FBtr0333330|FBtr0073755 13287493|13287493|13287493 13287741|13287741|13287741 X + 13287652 13287686 3'utr CG15743 FlyBase G61050.1 AATTACGTTGGTTGTGCGGCGGCGCGGCGGGGTCA 19 13287660 0.712804762 2 17 115 0.818181818 1.255272505 0.318181818 0.105263158 0.227272727 19 4 0 18 X:13287652-13287686 7 CG15743 FBtr0073755|FBtr0333330|FBtr0346123 13287493|13287493|13287493 13287741|13287741|13287741 GGTTGTG 7mer-m8 dme-miR-307a-3p X + 13287652 13287711 3'utr CG15743 FlyBase G46098.1 AATTACGTTGGTTGTGCGGCGGCGCGGCGGGGTCATGAACCCGGACCAAACCAAACCGCC 12 13287660 0.966796712 2 12 62 1 1.230448921 0.352941176 0.25 0.470588235 12 0 0 17 X:13287652-13287711 7 14.5 3182 FBgn0030465 244.6633333 20.01333333 30.50666667 0.059265113 0.724516989 0.475305944 1 1 1 0.2 dme-miR-1012-3p 6mer2-7 TGACTA X 13294202 13294207 + X_13294202_13294207_+ 0.983271619 0.991357069 0.987314344 0.005717312 CG15744 FBtr0073756 13293877 13294433 X + 13294088 13294221 3'utr CG15744 FlyBase G61056.1 ATATATATATATATGTATATATATGGGCAGTGGGCTTATATCTTAAGTTTCGCCCACTTAAAACCTAGCCAGCTAACTGAACTTGTAATTATAGTAAGGACTCCCTATTTATTATGACTAGTATTACTCCACAA 26 13294172 0.981870038 15 26 202 1 1.462397998 0.103448276 0.115384615 0.206896552 26 0 0 29 X:13294088-13294221 6 CG15744 FBtr0073756 13293877 13294433 TGACTA 6mer2-7 dme-miR-1012-3p X + 13294125 13294215 3'utr CG15744 FlyBase G46102.1 ATATCTTAAGTTTCGCCCACTTAAAACCTAGCCAGCTAACTGAACTTGTAATTATAGTAAGGACTCCCTATTTATTATGACTAGTATTACT 13 13294176 0.984352706 9 12 92 0.875 1.146128036 0.0625 0.230769231 0.375 13 2 0 14 X:13294125-13294215 6 5 3183 FBgn0030466 1200.416667 23.08666667 35.35 0.00416522 0.216575224 0.141442716 30 26 28 0.2 dme-miR-13b-2-5p 8mer-m1 TTTGACGC X 13294772 13294779 - X_13294772_13294779_- 0.615461727 0.604805545 0.610133636 0.007535071 CG1764 FBtr0339946|FBtr0073796 13294471|13294485 13294970|13294970 X - 13294706 13294872 3'utr CG1764 FlyBase G67187.1 CCCTGCTCTGTCCAGGCATCAGCAAAATTGTATTATCTTATTATAGTTTATACACACCATCTCTTGTTATTGTTACACAATTAAGATTAAACCTTTGACGCTAATCAAACTGATTGTCGCTGAGGCGTCGCTGCTGTTACTTTCCAGCTCATTGTTATTTTATAGGT 41 13294808 0.987971222 19 39 358 0.94 1.672097858 0.06 0.170731707 0.32 41 3 0 47 X:13294706-13294872 8 CG1764 FBtr0339946|FBtr0073796 13294471|13294485 13294970|13294970 TTTGACGC 8mer-m1 dme-miR-13b-2-5p X - 13294679 13294854 3'utr CG1764 FlyBase G50579.1 TCAGCAAAATTGTATTATCTTATTATAGTTTATACACACCATCTCTTGTTATTGTTACACAATTAAGATTAAACCTTTGACGCTAATCAAACTGATTGTCGCTGAGGCGTCGCTGCTGTTACTTTCCAGCTCATTGTTATTTTATAGGTTGTGTAATTCAATCAGAGTTGGAAAGT 32 13294758 0.982148016 12 30 233 0.955555556 1.633468456 0.066666667 0.3125 0.511111111 32 2 0 43 X:13294679-13294854 8 9 3184 FBgn0030467 288.8666667 25.22333333 38.49333333 0.031156243 0.356812475 0.23380672 29 -21 4 0.2 dme-miR-965-3p 6mer3-8 TACGCT X 13299842 13299847 + X_13299842_13299847_+ 0.851903514 0.568183045 0.710043279 0.20062069 CG1622 FBtr0073757|FBtr0310465|FBtr0339945 13299572|13298901|13297895 13299910|13299910|13299910 X + 13299821 13299861 3'utr CG1622 FlyBase G61063.1 TTTGTAATTTGTGACTACACTTACGCTGATAAAATAGTTTT 8 13299841 0.924473657 4 8 63 1 0.954242509 0 0.125 0.222222222 8 0 0 9 X:13299821-13299861 6 CG1622 FBtr0310465|FBtr0339945|FBtr0073757 13298901|13297895|13299572 13299910|13299910|13299910 TACGCT 6mer3-8 dme-miR-965-3p X + 13299781 13299861 3'utr CG1622 FlyBase G46105.1 CTAGACACAATCACATGCGGACACAGCAGCAAGGCTATATTTTGTAATTTGTGACTACACTTACGCTGATAAAATAGTTTT 10 13299841 0.973629031 5 10 60 1 1.113943352 0 0.3 0.461538462 10 0 0 13 X:13299781-13299861 6 7 3185 FBgn0030468 1094.686667 76.97333333 117.3766667 0.006394524 0.090940585 0.059637066 1 1 1 0.2 dme-miR-14-3p 8mer-A1 AAGACTGA X 13328933 13328940 + X_13328933_13328940_+ 0.643488654 0.64309863 0.643293642 0.000275842 IP3K2 FBtr0344168|FBtr0344171|FBtr0344170|FBtr0346133|FBtr0346134|FBtr0344169 13328764|13328764|13328764|13328764|13328764|13328764 13329069|13329303|13329303|13329303|13329303|13329303 X + 13328908 13328965 3'utr IP3K2 FlyBase G61091.1 ATTTAACCCCTTAAGTTTAAAATCAAAGACTGAAATCACAATATGCATACACATATTT 171 13328924 0.595304778 7 140 831 0.823232323 1.066059569 0.01010101 0.111111111 0.232323232 171 22 13 163 X:13328908-13328965 8 IP3K2 FBtr0344169|FBtr0346134|FBtr0346133|FBtr0344170|FBtr0344171|FBtr0344168 13328764|13328764|13328764|13328764|13328764|13328764 13329303|13329303|13329303|13329303|13329303|13329069 AAGACTGA 8mer-A1 dme-miR-14-3p X + 13328911 13328956 3'utr IP3K2 FlyBase G46128.1 TAACCCCTTAAGTTTAAAATCAAAGACTGAAATCACAATATGCATA 133 13328924 0.627803698 6 120 671 0.889473684 1.5289167 0 0.323308271 0.526315789 133 17 4 169 X:13328911-13328956 8 151.5 3186 FBgn0266375 946.9066667 46.57333333 71.42666667 0.159994649 3.25293444 2.121056562 9 9 9 0.2 dme-miR-184-3p 6mer2-7 CCGTCC X 13379599 13379604 + X_13379599_13379604_+ 0.992492761 0.862320717 0.927406739 0.092045575 CG1640 FBtr0073774|FBtr0073772|FBtr0073771|FBtr0073770|FBtr0073769|FBtr0339837|FBtr0073773 13379580|13379580|13379580|13379580|13379580|13379580|13379580 13380160|13380160|13380160|13380160|13380160|13380160|13380160 X + 13379576 13379650 stop_codon CG1640 FlyBase G61111.1 AAGTAGATCAGCTGCCAACTTCCCCGTCCTCGATCCCTGTGTTAAGTGTCAATCCTCCGGCTTAGGATTAAAAAT 45 13379608 0.759661754 15 40 308 0.907407407 1.389166084 0.12962963 0.2 0.333333333 45 4 1 49 X:13379576-13379650 6 CG1640 FBtr0339837|FBtr0073773|FBtr0073769|FBtr0073771|FBtr0073770|FBtr0073774|FBtr0073772 13379580|13379580|13379580|13379580|13379580|13379580|13379580 13380160|13380160|13380160|13380160|13380160|13380160|13380160 CCGTCC 6mer2-7 dme-miR-184-3p X + 13379569 13379653 stop_codon CG1640 FlyBase G46143.1 GAAGTACAAGTAGATCAGCTGCCAACTTCCCCGTCCTCGATCCCTGTGTTAAGTGTCAATCCTCCGGCTTAGGATTAAAAATTTA 30 13379609 0.765841305 11 27 225 0.904761905 1.579783597 0.261904762 0.366666667 0.547619048 30 4 0 38 X:13379569-13379653 6 26 3187 FBgn0030478 719.3333333 33.57333333 51.13 0.036144578 0.774424146 0.508507725 -9 -10 -9.5 0.2 dme-miR-14-3p 6mer3-8 AAGACT X 13380574 13380579 - X_13380574_13380579_- 0.522274567 0.881999093 0.70213683 0.254363633 Rbp1-like FBtr0339838 13380164 13380955 X - 13380555 13380596 3'utr Rbp1-like FlyBase G67198.1 ATTGGTTTTTAGGCCTTAAGACTTTGGTAGATTTTAATTCAG 23 13380572 0.768928257 6 23 241 1 1.431363764 0.074074074 0.130434783 0.259259259 23 0 0 27 X:13380555-13380596 6 Rbp1-like FBtr0339838 13380164 13380955 AAGACT 6mer3-8 dme-miR-14-3p X - 13380556 13380595 3'utr Rbp1-like FlyBase G50590.1 TTGGTTTTTAGGCCTTAAGACTTTGGTAGATTTTAATTCA 19 13380572 0.720135623 5 19 173 1 1.414973348 0.115384615 0.315789474 0.5 19 0 0 26 X:13380556-13380595 6 21 3188 FBgn0030479 464.9333333 40.22333333 61.53666667 0.045167766 0.522085025 0.341259953 -7 -7 -7 0.2 dme-miR-282-5p 6mer2-7 GAGGCT X 13386050 13386055 - X_13386050_13386055_- 0.558454328 0.576171882 0.567313105 0.012528235 Yippee FBtr0073789|FBtr0100168 13385912|13385912 13386343|13386533 X - 13385940 13386168 3'utr Yippee FlyBase G67203.1 CCGCCACGGAGCACATGCGACTACGGCCCTGTCTTAACGTGACTTAAACGTAATTGTAGGCACATCTAGCACGTAAGCAGCTGCGGCGCCCAATTCTACCATTTAAATGTCATGAGGCTGAAGTGCTAAAACGAAAAAGATGGGCTGCTACTCAGCTGGAACATATTCGAAACTGATGATCCACACTTGTCTTTTTCAAACAAGATCTCTAGGCCGTAATCAATCAGCA 537 13386056 0.998371706 28 524 2786 0.986686391 2.347004579 0.022189349 0.2141527 0.375739645 537 7 2 667 X:13385940-13386168 6 Yippee FBtr0073789|FBtr0100168 13385912|13385912 13386343|13386533 GAGGCT 6mer2-7 dme-miR-282-5p X - 13385990 13386086 3'utr Yippee FlyBase G50594.1 GCGGCGCCCAATTCTACCATTTAAATGTCATGAGGCTGAAGTGCTAAAACGAAAAAGATGGGCTGCTACTCAGCTGGAACATATTCGAAACTGATGA 328 13386056 0.956721014 11 323 1521 0.992110454 2.701567985 0.007889546 0.402439024 0.613412229 328 4 0 503 X:13385990-13386086 6 363.5 3189 FBgn0026749 336.1966667 36.58666667 56.19666667 1.081212386 9.935313411 6.468355181 1 1 1 0.2 dme-miR-184-3p 6mer3-8 TCCGTC X 13386369 13386374 - X_13386369_13386374_- 0.900781848 0.903441527 0.902111688 0.001880692 Yippee FBtr0100168 13385912 13386533 X - 13386332 13386390 stop_codon Yippee FlyBase G67205.1 CAGAGGCAGAGGGCTTTCCGTCGGAGGCCGCCACCACGAGTCATTGAGCCGATTGAATA 9 13386375 0.907862781 3 9 30 1 1 0.3 0.111111111 0.2 9 0 0 10 X:13386332-13386390 6 Yippee FBtr0100168 13385912 13386533 TCCGTC 6mer3-8 dme-miR-184-3p X - 13386335 13386388 stop_codon Yippee FlyBase G50597.1 GAGGCAGAGGGCTTTCCGTCGGAGGCCGCCACCACGAGTCATTGAGCCGATTGA 7 13386375 0.914543212 3 7 24 1 1 0.3 0.428571429 0.6 7 0 0 10 X:13386335-13386388 6 6.5 3190 FBgn0026749 336.1966667 36.58666667 56.19666667 0.019333922 0.17766035 0.115665223 1 1 1 0.2 dme-miR-304-5p 7mer-m8 TGAGATT X 13389068 13389074 + X_13389068_13389074_+ 0.472696048 0.430760274 0.451728161 0.029653018 CG1662 FBtr0342624 13388748 13389332 X + 13389034 13389084 3'utr CG1662 FlyBase G61116.1 CGGGCTAACAAACATGCGATGCGATGTGATGCGTTGAGATTGGAGGCGATG 7 13389068 0.959490653 4 7 35 1 0.954242509 0.444444444 0.142857143 0.333333333 7 0 0 9 X:13389034-13389084 7 CG1662 FBtr0342624 13388748 13389332 TGAGATT 7mer-m8 dme-miR-304-5p X + 13389059 13389084 3'utr CG1662 FlyBase G46147.1 GTGATGCGTTGAGATTGGAGGCGATG 5 13389067 0.708644764 3 4 24 0.833333333 0.698970004 0.5 0.2 0.333333333 5 1 0 5 X:13389059-13389084 7 5 3191 FBgn0030481 293.9633333 22.57333333 34.69666667 0.017008924 0.221500295 0.144106062 0 1 0.5 0.2 dme-miR-980-3p 6mer3-8 GGCAGC X 13389129 13389134 + X_13389129_13389134_+ 0.998017566 0.989720822 0.993869194 0.005866724 CG1662 FBtr0342624 13388748 13389332 X + 13389106 13389142 3'utr CG1662 FlyBase G61117.1 TTTTCACCTGATAAGCTCTGCTTGGCAGCGGTCTTAA 10 13389127 0.649378848 4 9 66 0.923076923 0.77815125 0.307692308 0.3 0.461538462 10 0 1 12 X:13389106-13389142 6 CG1662 FBtr0342624 13388748 13389332 GGCAGC 6mer3-8 dme-miR-980-3p X + 13389109 13389139 3'utr CG1662 FlyBase G46148.1 TCACCTGATAAGCTCTGCTTGGCAGCGGTCT 8 13389127 0.71628303 3 6 42 0.727272727 0.602059991 0.181818182 0.375 0.545454545 8 2 1 8 X:13389109-13389139 6 9 3192 FBgn0030481 293.9633333 22.57333333 34.69666667 0.030616063 0.398700532 0.259390912 2 2 2 0.2 dme-miR-7-5p 6mer2-7 TCTTCC X 13409149 13409154 + X_13409149_13409154_+ 0.999798735 0.999465093 0.999631914 0.000235891 GstT4 FBtr0073778 13409034 13409323 X + 13409133 13409235 3'utr GstT4 FlyBase G61143.1 TTGTGATTATACTTGCTCTTCCTATCCAATAAGTCTTAGCCTTTCCATCACACTTGTTTTAACAATACCATTTGTGTCACGTAATGCTCATCTGTTTAAACGT 66 13409146 0.810226373 14 57 563 0.890243902 1.08517161 0.317073171 0.212121212 0.365853659 66 4 5 73 X:13409133-13409235 6 GstT4 FBtr0073778 13409034 13409323 TCTTCC 6mer2-7 dme-miR-7-5p X + 13409135 13409186 3'utr GstT4 FlyBase G46175.1 GTGATTATACTTGCTCTTCCTATCCAATAAGTCTTAGCCTTTCCATCACACT 27 13409146 0.708215918 9 25 238 0.9 1.255272505 0.05 0.37037037 0.575 27 3 1 36 X:13409135-13409186 6 26.5 3193 FBgn0030484 325.7333333 32.05333333 48.2 0.081354892 0.826747088 0.549792531 3 3 3 0.2 dme-miR-965-3p 8mer-A1 TACGCTTA X 13409307 13409314 + X_13409307_13409314_+ 0.606956589 0.596246066 0.601601327 0.007573467 GstT4 FBtr0073778 13409034 13409323 X + 13409251 13409325 3'utr GstT4 FlyBase G61144.1 AATCTTATATATAAACTTAGTTGTTAATTATGTATTTTAATTATTCGTATATAAAGTACGCTTATGTTTGTTTAA 47 13409307 0.989824585 7 43 431 0.95 1.45484486 0.183333333 0.255319149 0.416666667 47 2 1 57 X:13409251-13409325 8 GstT4 FBtr0073778 13409034 13409323 TACGCTTA 8mer-A1 dme-miR-965-3p X + 13409289 13409328 3'utr GstT4 FlyBase G46177.2 AATTATTCGTATATAAAGTACGCTTATGTTTGTTTAAATA 32 13409307 0.855569098 6 26 272 0.868421053 1.217483944 0.105263158 0.15625 0.289473684 32 4 1 33 X:13409289-13409328 8 37 3194 FBgn0030484 325.7333333 32.05333333 48.2 0.113589849 1.154326123 0.767634855 0 0 0 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT X 1344056 1344062 + X_1344056_1344062_+ 0.58500358 0.405274148 0.495138864 0.127087948 CG11412 FBtr0310619|FBtr0070209 1343942|1343942 1344770|1344770 X + 1344005 1344106 3'utr CG11412 FlyBase G57908.1 GCGCTCTGCGGAGGACCAGGGCGCTCCCCTCGTCCTGGGTCCTGGCCAGCTGGCAGCTTGTATCGGCGCCCTCTTTTTTGTACCTATTTAACTAGGAAGCAT 21 1344055 0.983582594 7 21 161 1 1.380211242 0.083333333 0.142857143 0.25 21 0 0 24 X:1344005-1344106 7 CG11412 FBtr0070209|FBtr0310619 1343942|1343942 1344770|1344770 GGCAGCT 7mer-m8 dme-miR-980-3p X + 1344033 1344101 3'utr CG11412 FlyBase G43808.2 CTCGTCCTGGGTCCTGGCCAGCTGGCAGCTTGTATCGGCGCCCTCTTTTTTGTACCTATTTAACTAGGA 8 1344055 0.983836558 2 7 64 0.9 0.954242509 0 0.25 0.4 8 1 0 9 X:1344033-1344101 7 8.5 3195 FBgn0024362 306.67 16.69 25.75666667 0.02771709 0.509286998 0.330011647 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 1350142 1350148 - X_1350142_1350148_- 0.612187804 0.708070477 0.66012914 0.067799307 CG12773 FBtr0070235|FBtr0070235|FBtr0070235|FBtr0342738|FBtr0342738|FBtr0342738|FBtr0332287|FBtr0332287|FBtr0332287 1349885|1349885|1349885|1349621|1349621|1349621|1349885|1349885|1349885 1350877|1350877|1350877|1350877|1350877|1350877|1350877|1350877|1350877 X - 1350127 1350162 3'utr CG12773 FlyBase G63979.1 TTCGAGGAGACATATGTGATACTGAGATAATAAGTG 19 1350140 0.777748911 3 17 97 0.962962963 1.414973348 0.518518519 0.263157895 0.481481481 19 1 0 26 X:1350127-1350162 7 CG12773 FBtr0332287|FBtr0332287|FBtr0332287|FBtr0342738|FBtr0342738|FBtr0342738|FBtr0070235|FBtr0070235|FBtr0070235 1349885|1349885|1349885|1349621|1349621|1349621|1349885|1349885|1349885 1350877|1350877|1350877|1350877|1350877|1350877|1350877|1350877|1350877 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 1350117 1350162 3'utr CG12773 FlyBase G48228.1 TTCGAGGAGACATATGTGATACTGAGATAATAAGTGAAACCAAAAC 17 1350140 0.925374563 3 17 93 1 1.361727836 0.47826087 0.352941176 0.52173913 17 0 0 23 X:1350117-1350162 7 18 3196 FBgn0024365 573.3566667 17.87333333 27.26333333 0.031394071 1.007086908 0.660227412 -8 -8 -8 0.2 dme-miR-276a-3p 6mer2-7 GTTCCT X 1350263 1350268 - X_1350263_1350268_- 0.911598118 0.718320579 0.814959348 0.136667831 CG12773 FBtr0070235|FBtr0342738|FBtr0332287 1349885|1349621|1349885 1350877|1350877|1350877 X - 1350223 1350281 3'utr CG12773 FlyBase G63980.1 ATTCTTTCGATGTGTTCCTTGCTCTCGTAGTTCTTCAACGATTACTCCTTAGTTGAGAG 10 1350262 0.867142976 4 9 99 0.923076923 1.079181246 0 0.3 0.461538462 10 1 0 12 X:1350223-1350281 6 CG12773 FBtr0332287|FBtr0342738|FBtr0070235 1349885|1349621|1349885 1350877|1350877|1350877 GTTCCT 6mer2-7 dme-miR-276a-3p X - 1350241 1350286 3'utr CG12773 FlyBase G48229.1 TTCGCATTCTTTCGATGTGTTCCTTGCTCTCGTAGTTCTTCAACGA 7 1350262 0.989628485 4 7 77 1 0.84509804 0 0 0 7 0 0 7 X:1350241-1350286 6 6.5 3197 FBgn0024365 573.3566667 17.87333333 27.26333333 0.011336748 0.363670272 0.238415454 -6 -6 -6 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 1350580 1350585 - X_1350580_1350585_- 0.995975876 0.910215838 0.953095857 0.060641548 CG12773 FBtr0070235|FBtr0070235|FBtr0070235|FBtr0342738|FBtr0342738|FBtr0342738|FBtr0332287|FBtr0332287|FBtr0332287 1349885|1349885|1349885|1349621|1349621|1349621|1349885|1349885|1349885 1350877|1350877|1350877|1350877|1350877|1350877|1350877|1350877|1350877 X - 1350424 1350682 3'utr CG12773 FlyBase G63982.1 TGTATTTGATGTATAGTTAGGATAGCGACAGCTGAGGTCACGATGGTAGTATTCCAAACTCGGTCTTAGTTCGTTTTGCTTTAACAAAATTTGGAGTCTGTGACGCATTTTAACTGGGACTCTCCCACGATGTAGTGCTTAGATAAGAAAATGTTGATAGTGTATTGATTTTTAGCTTTTTACTAGTTGTTAAAACGTTCGGAGGTCAGCCAAATCAGAGCACATTTCAGTTGCGGAGGCTCCATTCTGACCACAGCTG 29 1350592 0.981713208 19 28 224 0.96875 1.491361694 0.28125 0.103448276 0.1875 29 1 0 31 X:1350424-1350682 6 CG12773 FBtr0332287|FBtr0332287|FBtr0332287|FBtr0342738|FBtr0342738|FBtr0342738|FBtr0070235|FBtr0070235|FBtr0070235 1349885|1349885|1349885|1349621|1349621|1349621|1349885|1349885|1349885 1350877|1350877|1350877|1350877|1350877|1350877|1350877|1350877|1350877 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X - 1350568 1350610 3'utr CG12773 FlyBase G48231.1 GTTTTGCTTTAACAAAATTTGGAGTCTGTGACGCATTTTAACT 11 1350582 0.771061075 5 11 82 1 1.230448921 0.294117647 0.363636364 0.588235294 11 0 0 17 X:1350568-1350610 6 9 3198 FBgn0024365 573.3566667 17.87333333 27.26333333 0.015697036 0.503543454 0.330113706 7 -3 2 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA X 1356596 1356603 - X_1356596_1356603_- 0.499685842 0.499294282 0.499490062 0.000276832 png FBtr0070234 1356486 1356657 X - 1356536 1356629 3'utr png FlyBase G63997.1 GAGGAGACCTCAACAAATATTTCATTGTACTTAAGAACTAGGCTAGCTTAAGCGATAAATTAAGGTGTGTGCTGTGCTTTGTGTGCGCCTGTGC 20 1356604 0.989153272 7 19 183 0.956521739 1.342422681 0.043478261 0.1 0.217391304 20 1 0 22 X:1356536-1356629 8 png FBtr0070234 1356486 1356657 GTACTTAA 8mer-A1 dme-miR-252-5p X - 1356575 1356618 3'utr png FlyBase G48241.1 AACAAATATTTCATTGTACTTAAGAACTAGGCTAGCTTAAGCGA 7 1356604 0.703754787 4 7 54 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 X:1356575-1356618 8 11 3199 FBgn0000826 56.66666667 6.136666667 9.246666667 0.194117647 1.792504074 1.18961788 1 1 1 0.2 dme-miR-317-3p 7mer-A1 GTGTTCA X 13590874 13590880 + X_13590874_13590880_+ 0.814731465 0.79526133 0.804996398 0.01376751 Tango13 FBtr0310433|FBtr0333723|FBtr0310432 13590373|13589952|13589952 13593224|13591760|13591760 X + 13590846 13590891 3'utr Tango13 FlyBase G61163.1 TTACTATTACCTTGATTACCAGCTAATCGTGTTCAATTGATAAGCT 44 13590872 0.792006086 8 39 425 0.867924528 1.361727836 0.433962264 0.159090909 0.301886792 44 6 1 46 X:13590846-13590891 7 Tango13 FBtr0310432|FBtr0333723|FBtr0310433 13589952|13589952|13590373 13591760|13591760|13593224 GTGTTCA 7mer-A1 dme-miR-317-3p X + 13590829 13590892 3'utr Tango13 FlyBase G46192.1 TGAAATGGTCAGTACAATTACTATTACCTTGATTACCAGCTAATCGTGTTCAATTGATAAGCTA 45 13590872 0.776597679 11 33 431 0.777777778 1.799340549 0.580246914 0.488888889 0.716049383 45 18 0 63 X:13590829-13590892 7 40 3200 FBgn0086674 1960.31 48.50666667 74.51333333 0.020404936 0.824628917 0.536816677 2 2 2 0.2 dme-miR-1012-3p 6mer3-8 TTGACT X 13591665 13591670 + X_13591665_13591670_+ 0.624249298 0.828588531 0.726418915 0.144489634 Tango13 FBtr0310433|FBtr0333723|FBtr0310432 13590373|13589952|13589952 13593224|13591760|13591760 X + 13591639 13591677 3'utr Tango13 FlyBase G61167.1 AACTTTTTTTTTTGTGTTGCAATAAATTGACTGAATGTA 22 13591665 0.866909578 6 21 185 0.92 1.361727836 0.4 0.136363636 0.24 22 2 0 23 X:13591639-13591677 6 Tango13 FBtr0310432|FBtr0333723|FBtr0310433 13589952|13589952|13590373 13591760|13591760|13593224 TTGACT 6mer3-8 dme-miR-1012-3p X + 13591646 13591686 3'utr Tango13 FlyBase G46196.1 TTTTTTGTGTTGCAATAAATTGACTGAATGTAAAGAAAACC 21 13591664 0.723449522 6 21 152 1 1.477121255 0.333333333 0.428571429 0.6 21 0 0 30 X:13591646-13591686 6 21.5 3201 FBgn0086674 1960.31 48.50666667 74.51333333 0.010967653 0.443238043 0.288538964 0 1 0.5 0.2 dme-miR-252-5p 7mer-m8 GTACTTA X 13592253 13592259 + X_13592253_13592259_+ 0.374280053 0.51969746 0.446988757 0.10282563 Tango13 FBtr0310433 13590373 13593224 X + 13592190 13592285 3'utr Tango13 FlyBase G61168.1 AGACACACGAGCCTTGTCCGTCCTAACTGCTGTGTGTGTGGGCGAACGGGATGGCTATATTATGTACTTACTTGCCGTTAGCTTTGTGCTCAAAGA 51 13592252 0.95608359 8 48 466 0.963636364 1.72427587 0.4 0.078431373 0.145454545 51 2 0 53 X:13592190-13592285 7 Tango13 FBtr0310433 13590373 13593224 GTACTTA 7mer-m8 dme-miR-252-5p X + 13592227 13592272 3'utr Tango13 FlyBase G46197.1 GTGGGCGAACGGGATGGCTATATTATGTACTTACTTGCCGTTAGCT 19 13592252 0.987410824 3 18 186 0.966666667 1.462397998 0.5 0.368421053 0.6 19 1 0 29 X:13592227-13592272 7 28.5 3202 FBgn0086674 1960.31 48.50666667 74.51333333 0.014538517 0.587548103 0.382481882 1 1 1 0.2 dme-miR-14-3p 6mer3-8 AAGACT X 13660541 13660546 + X_13660541_13660546_+ 0.999995551 0.999989884 0.999992718 4.03E-06 NFAT FBtr0301451 13658114 13661942 X + 13660491 13660578 3'utr NFAT FlyBase G61197.1 AGTGAAAGGCACTCGGATTTTACGGACCTCTCCCTTAGCAATCCCCTTCCAAGACTTATTCTCAGAAACCTGACCTAGGATTAAGAGG 14 13660549 0.98117135 8 13 99 0.933333333 1.146128036 0.4 0.071428571 0.133333333 14 1 0 14 X:13660491-13660578 6 NFAT FBtr0301451 13658114 13661942 AAGACT 6mer3-8 dme-miR-14-3p X + 13660513 13660564 3'utr NFAT FlyBase G46216.1 CGGACCTCTCCCTTAGCAATCCCCTTCCAAGACTTATTCTCAGAAACCTGAC 10 13660549 0.977973821 5 10 70 1 1.113943352 0.076923077 0.2 0.384615385 10 0 0 13 X:13660513-13660564 6 9.5 3203 FBgn0030505 2159.646667 45.51666667 69.65666667 0.004398868 0.208714756 0.136383213 -8 -8 -8 0.2 dme-miR-34-5p 7mer-A1 ACTGCCA X 13663145 13663151 + X_13663145_13663151_+ 0.734509471 0.736590259 0.735549865 0.001471348 NFAT FBtr0073808|FBtr0301450|FBtr0345127|FBtr0301449|FBtr0340396|FBtr0112980 13662758|13662758|13662758|13662758|13658114|13662758 13663657|13663657|13663657|13664568|13663657|13663657 X + 13663092 13663172 5'utr NFAT FlyBase G61209.1 AAAAAACAAATGATGAACTTATCTCAAAAGGTTAAATTAAAACAATGATAACGACTGCCATATACCTATGAAATATGAAGT 65 13663138 0.747232815 10 58 328 0.890243902 1.86332286 0.085365854 0.169230769 0.341463415 65 9 0 73 X:13663092-13663172 7 NFAT FBtr0301449|FBtr0340396|FBtr0112980|FBtr0073808|FBtr0301450|FBtr0345127 13662758|13658114|13662758|13662758|13662758|13662758 13664568|13663657|13663657|13663657|13663657|13663657 ACTGCCA 7mer-A1 dme-miR-34-5p X + 13663099 13663185 5'utr NFAT FlyBase G46224.1 AAATGATGAACTTATCTCAAAAGGTTAAATTAAAACAATGATAACGACTGCCATATACCTATGAAATATGAAGTGAAATCCCGAAAG 46 13663139 0.969119468 9 43 235 0.9375 1.477121255 0.09375 0.391304348 0.5625 46 3 1 60 X:13663099-13663185 7 35.5 3204 FBgn0030505 2159.646667 45.51666667 69.65666667 0.016437874 0.77993409 0.509642532 7 6 6.5 0.2 dme-miR-932-5p 6mer2-7 GAATTG X 13664246 13664251 + X_13664246_13664251_+ 0.999991469 0.999694447 0.999842958 0.000210081 NFAT FBtr0301449 13662758 13664568 X + 13664217 13664266 3'utr NFAT FlyBase G61214.2 GAGAGAGAGAGCGAAGAGCTCGCGCTTAAGAATTGTTAGTGTTAAATGTT 66 13664252 0.982067367 6 63 547 0.96 1.857332496 0.493333333 0.106060606 0.213333333 66 3 0 72 X:13664217-13664266 6 NFAT FBtr0301449 13662758 13664568 GAATTG 6mer2-7 dme-miR-932-5p X + 13664216 13664265 3'utr NFAT FlyBase G46229.1 AGAGAGAGAGAGCGAAGAGCTCGCGCTTAAGAATTGTTAGTGTTAAATGT 31 13664252 0.983544032 4 30 233 0.977777778 1.643452676 0.511111111 0.419354839 0.6 31 1 0 44 X:13664216-13664265 6 46 3205 FBgn0030505 2159.646667 45.51666667 69.65666667 0.021299781 1.010618821 0.660381873 -6 -6 -6 0.2 dme-miR-31a-5p 6mer3-8 TCTTGC X 13684305 13684310 + X_13684305_13684310_+ 0.767814526 0.881412083 0.824613305 0.080325633 CG11158 FBtr0073812 13684066 13684616 X + 13684284 13684319 3'utr CG11158 FlyBase G61216.1 CGAGTGATTGGCCAAATGATCTCTTGCATCACTATA 8 13684300 0.807112288 2 8 58 1 1.079181246 0.25 0.375 0.583333333 8 0 0 12 X:13684284-13684319 6 CG11158 FBtr0073812 13684066 13684616 TCTTGC 6mer3-8 dme-miR-31a-5p X + 13684282 13684317 3'utr CG11158 FlyBase G46230.1 TACGAGTGATTGGCCAAATGATCTCTTGCATCACTA 11 13684300 0.78245223 3 11 81 1 1.380211242 0 0.636363636 0.833333333 11 0 0 24 X:13684282-13684317 6 9.5 3206 FBgn0030511 119.0866667 8.99 13.68666667 0.079773834 1.0567297 0.694106186 5 5 5 0.2 dme-miR-1006-3p 6mer2-7 GAATTT X 13684451 13684456 - X_13684451_13684456_- 0.999974116 0.999916358 0.999945237 4.08E-05 CG9940 FBtr0073844 13684378 13685808 X - 13684417 13684478 3'utr CG9940 FlyBase G67256.1 ATGTAGATTTATAGCACATTGTGAATTTGAACACTCGCATCAGATCGATTTAATGGAACACT 12 13684460 0.986281462 5 12 102 1 1.146128036 0.071428571 0.166666667 0.285714286 12 0 0 14 X:13684417-13684478 6 CG9940 FBtr0073844 13684378 13685808 GAATTT 6mer2-7 dme-miR-1006-3p X - 13684442 13684482 3'utr CG9940 FlyBase G50633.1 AAGCATGTAGATTTATAGCACATTGTGAATTTGAACACTCG 7 13684452 0.847391069 5 7 58 1 1.113943352 0 0.428571429 0.692307692 7 0 0 13 X:13684442-13684482 6 8.5 3207 FBgn0030512 1001.65 27.86666667 42.76666667 0.008485998 0.305023923 0.198752923 4 -4 0 0.2 dme-miR-307a-3p 7mer-m8 GGTTGTG X 13685072 13685078 - X_13685072_13685078_- 0.702966973 0.702968578 0.702967776 1.13E-06 CG9940 FBtr0343352|FBtr0073844|FBtr0073845 13684551|13684378|13684551 13685808|13685808|13685808 X - 13685060 13685087 3'utr CG9940 FlyBase G67258.1 TGTGTTATTGGTTGTGTACGGTGCGGCT 6 13685073 0.656934328 3 5 56 1 0.954242509 0.444444444 0.333333333 0.555555556 6 0 0 9 X:13685060-13685087 7 CG9940 FBtr0073845|FBtr0343352|FBtr0073844 13684551|13684551|13684378 13685808|13685808|13685808 GGTTGTG 7mer-m8 dme-miR-307a-3p X - 13685059 13685088 3'utr CG9940 FlyBase G50634.1 TTGTGTTATTGGTTGTGTACGGTGCGGCTT 5 13685079 0.739103348 2 3 45 0.5 0.602059991 0.125 0.4 0.625 5 4 0 4 X:13685059-13685088 7 5 3208 FBgn0030512 1001.65 27.86666667 42.76666667 0.004991764 0.179425837 0.116913484 -5 1 -2 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 13717793 13717798 + X_13717793_13717798_+ 0.723047583 0.624941807 0.673994695 0.069371276 NnaD FBtr0340678|FBtr0340680|FBtr0340679 13717605|13717605|13717605 13717835|13717835|13717835 X + 13717776 13717808 3'utr NnaD FlyBase G61229.1 ATGTAAACCCGATCTCTGTACCTACAGTTAATC 9 13717792 0.833073886 2 8 52 0.888888889 0.903089987 0 0 0 9 1 0 8 X:13717776-13717808 6 NnaD FBtr0340680|FBtr0340678|FBtr0340679 13717605|13717605|13717605 13717835|13717835|13717835 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X + 13717749 13717802 3'utr NnaD FlyBase G46244.1 TAACACCTATAGGCGTATTTTATGCATATGTAAACCCGATCTCTGTACCTACAG 9 13717792 0.967355905 4 9 53 1 1.146128036 0.285714286 0.333333333 0.571428571 9 0 0 14 X:13717749-13717802 6 8 3209 FBgn0265726 100.7866667 2.52 3.85 0.079375579 3.174603175 2.077922078 1 1 1 0.2 dme-miR-79-3p 7mer-m8 TAGCTTT X 13719126 13719132 - X_13719126_13719132_- 0.619948983 0.620122937 0.62003596 0.000122966 CG9941 FBtr0073843 13718732 13719175 X - 13719108 13719151 3'utr CG9941 FlyBase G67268.2 GAAATTCGTTTTCTCGTTTTAGCTTTGCGTTTATACTATTTATT 11 13719130 0.610710672 4 8 125 0.866666667 1.113943352 0.333333333 0.181818182 0.4 11 2 0 13 X:13719108-13719151 7 CG9941 FBtr0073843 13718732 13719175 TAGCTTT 7mer-m8 dme-miR-79-3p X - 13719086 13719145 3'utr CG9941 FlyBase G50639.1 CGTTTTCTCGTTTTAGCTTTGCGTTTATACTATTTATTCGGAGTTCACCTAGATTTAGTT 6 13719133 0.98966561 4 6 60 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 X:13719086-13719145 7 6.5 3210 FBgn0030514 1053.746667 41.08333333 63.20333333 0.006168466 0.15821501 0.102842677 -2 1 -0.5 0.2 dme-miR-79-3p 6mer2-7 AGCTTT X 13736887 13736892 - X_13736887_13736892_- 0.996908025 0.949136544 0.973022284 0.033779552 Grip91 FBtr0073841 13736568 13737101 X - 13736861 13736900 3'utr Grip91 FlyBase G67297.1 ATATCTCAAGCTTTGCCGTCAATCGCCTGGCTGCAAGCCA 13 13736887 0.677060716 5 13 74 1 1.230448921 0.117647059 0.230769231 0.411764706 13 0 0 17 X:13736861-13736900 6 Grip91 FBtr0073841 13736568 13737101 AGCTTT 6mer2-7 dme-miR-79-3p X - 13736822 13736892 3'utr Grip91 FlyBase G50656.1 AGCTTTGCCGTCAATCGCCTGGCTGCAAGCCATCAACTTAAGATATCTCCAATACAAAATTATTGAGTAGT 6 13736889 0.97645154 5 6 39 1 0.954242509 0 0.5 0.666666667 6 0 0 9 X:13736822-13736892 6 7.5 3211 FBgn0001612 613.5433333 20.81666667 31.92333333 0.012224075 0.360288231 0.234937872 -5 -3 -4 0.2 dme-miR-980-3p 6mer3-8 GGCAGC X 1373777 1373782 + X_1373777_1373782_+ 0.961890798 0.959938421 0.96091461 0.001380555 ssx FBtr0339773|FBtr0339774|FBtr0339772|FBtr0070215 1373350|1373114|1371989|1373114 1374677|1375257|1374677|1374677 X + 1373766 1373795 3'utr ssx FlyBase G57923.1 ATCCAAGCATTGGCAGCAAGAGGCAAAGCA 6 1373776 0.635036294 2 6 7 1 0.903089987 0.25 0.166666667 0.375 6 0 0 8 X:1373766-1373795 6 ssx FBtr0339772|FBtr0070215|FBtr0339773|FBtr0339774 1371989|1373114|1373350|1373114 1374677|1374677|1374677|1375257 GGCAGC 6mer3-8 dme-miR-980-3p X + 1373763 1373801 3'utr ssx FlyBase G43819.1 CAAATCCAAGCATTGGCAGCAAGAGGCAAAGCAAAGGTG 16 1373776 0.704403669 2 15 24 0.96 1.380211242 0.08 0.4375 0.64 16 1 0 24 X:1373763-1373801 6 11 3212 FBgn0024987 898.8266667 36.91666667 56.86333333 0.012238177 0.297968397 0.193446275 1 1 1 0.2 dme-miR-2535b-3p 8mer-A1 CCGTGAGA X 1374558 1374565 + X_1374558_1374565_+ 0.606735333 0.632510984 0.619623159 0.018226172 ssx FBtr0339773|FBtr0339774|FBtr0339772|FBtr0070215 1373350|1373114|1371989|1373114 1374677|1375257|1374677|1374677 X + 1374454 1374582 3'utr ssx FlyBase G57928.1 ATGAATGATGTATAAATACCCGAACTTCGGGTAAACTTCCAACAGAAACCCGACAAGAAGATGGCTGAATATGAAATAAACTTGAAATTTTCCAACCAGCATACCCGTGAGACCCAGAGGTCCGAAATT 36 1374555 0.964340804 9 36 119 1 1.643452676 0.25 0.166666667 0.318181818 36 0 0 44 X:1374454-1374582 8 ssx FBtr0339772|FBtr0070215|FBtr0339773|FBtr0339774 1371989|1373114|1373350|1373114 1374677|1374677|1374677|1375257 CCGTGAGA 8mer-A1 dme-miR-2535b-3p X + 1374537 1374579 3'utr ssx FlyBase G43824.1 GAAATTTTCCAACCAGCATACCCGTGAGACCCAGAGGTCCGAA 14 1374555 0.837149664 3 11 36 0.8 1.204119983 0.05 0.357142857 0.55 14 4 0 16 X:1374537-1374579 8 16 3213 FBgn0024987 898.8266667 36.91666667 56.86333333 0.017800985 0.433408578 0.2813764 3 3 3 0.2 dme-miR-1012-3p 6mer3-8 TTGACT X 13745971 13745976 - X_13745971_13745976_- 0.97346561 0.918021456 0.945743533 0.039204899 Pdcd4 FBtr0331711|FBtr0331712|FBtr0112981 13745575|13745575|13745575 13746775|13746775|13746775 X - 13745958 13746027 3'utr Pdcd4 FlyBase G67310.1 TTATGCTATCAACGCAATCAAAACTCTGATGATTACACAAAACAAATTCCATTGACTTGAAATTGAGAAA 19 13745976 0.973292224 8 18 110 0.956521739 1.342422681 0.043478261 0.210526316 0.347826087 19 1 0 22 X:13745958-13746027 6 Pdcd4 FBtr0112981|FBtr0331712|FBtr0331711 13745575|13745575|13745575 13746775|13746775|13746775 TTGACT 6mer3-8 dme-miR-1012-3p X - 13745963 13746013 3'utr Pdcd4 FlyBase G50665.1 CAATCAAAACTCTGATGATTACACAAAACAAATTCCATTGACTTGAAATTG 12 13745979 0.756968307 7 12 67 1 1.278753601 0 0.25 0.526315789 12 0 0 19 X:13745963-13746013 6 10 3214 FBgn0030520 6370.806667 230.15 350.2466667 0.00156966 0.043449924 0.028551307 0 3 1.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC X 1374620 1374625 + X_1374620_1374625_+ 0.999638199 0.999894409 0.999766304 0.000181161 ssx FBtr0339773|FBtr0339774|FBtr0339772|FBtr0070215 1373350|1373114|1371989|1373114 1374677|1375257|1374677|1374677 X + 1374606 1374660 3'utr ssx FlyBase G57929.1 TCTAAACGTAAATCCTAGTCTCGTAGCAATATCATAGTTAAGGTGACTTTTTTTT 15 1374618 0.722758516 5 14 108 0.952380952 1.301029996 0.238095238 0.2 0.428571429 15 1 0 20 X:1374606-1374660 6 ssx FBtr0339772|FBtr0070215|FBtr0339773|FBtr0339774 1371989|1373114|1373350|1373114 1374677|1374677|1374677|1375257 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" X + 1374584 1374649 3'utr ssx FlyBase G43825.1 TTTTTTTTTAGTATTGATAATCTCTAAACGTAAATCCTAGTCTCGTAGCAATATCATAGTTAAGGT 11 1374626 0.985095887 4 9 80 0.833333333 1.176091259 0.166666667 0.545454545 0.722222222 11 3 0 15 X:1374584-1374649 6 10 3215 FBgn0024987 898.8266667 36.91666667 56.86333333 0.011125616 0.270880361 0.17586025 2 -6 -2 0.2 dme-bantam-3p 7mer-m8 TGATCTC X 13746439 13746445 - X_13746439_13746445_- 0.597364054 0.623207807 0.61028593 0.018274256 Pdcd4 FBtr0331711|FBtr0331712|FBtr0112981 13745575|13745575|13745575 13746775|13746775|13746775 X - 13746421 13746471 3'utr Pdcd4 FlyBase G67313.2 AAAAAAACAAACAATCAATCGGAATTTGATCTCCGTTTAAACTATATTCAT 243 13746446 0.79898818 11 230 2021 0.962068966 1.968482949 0.065517241 0.164609053 0.3 243 9 2 279 X:13746421-13746471 7 Pdcd4 FBtr0112981|FBtr0331712|FBtr0331711 13745575|13745575|13745575 13746775|13746775|13746775 TGATCTC 7mer-m8 dme-bantam-3p X - 13746389 13746469 3'utr Pdcd4 FlyBase G50669.1 AAAAACAAACAATCAATCGGAATTTGATCTCCGTTTAAACTATATTCATTATTATACTACATAAACACCTACAACGTATAT 169 13746446 0.985687804 11 166 1380 0.966942149 2.369215857 0.074380165 0.349112426 0.545454545 169 8 0 234 X:13746389-13746469 7 201.5 3216 FBgn0030520 6370.806667 230.15 350.2466667 0.031628648 0.875515968 0.57530883 1 1 1 0.2 dme-miR-317-3p 6mer3-8 TGTGTT X 13774084 13774089 + X_13774084_13774089_+ 0.99757376 0.967327278 0.982450519 0.021387505 rdgB FBtr0301532 13773981 13775189 X + 13774000 13774106 3'utr rdgB FlyBase G61262.1 CTGGCGCTGCTAGAGACGATCCACTGTACAGAGCGCACCCACTGTAACGCCCGATCCTCGCTGTGTATATATGTATCCTGTGTTTGTGTTTAGTGTAAATAGGTCAA 8 13774085 0.991785123 5 6 64 0.888888889 0.903089987 0.111111111 0.125 0.222222222 8 1 0 8 X:13774000-13774106 6 rdgB FBtr0301532 13773981 13775189 TGTGTT 6mer3-8 dme-miR-317-3p X + 13774029 13774107 3'utr rdgB FlyBase G46264.1 AGAGCGCACCCACTGTAACGCCCGATCCTCGCTGTGTATATATGTATCCTGTGTTTGTGTTTAGTGTAAATAGGTCAAC 9 13774083 0.988262605 7 8 75 0.875 1.146128036 0.5625 0.666666667 0.8125 9 2 0 14 X:13774029-13774107 6 5 3217 FBgn0003218 381.5 8.42 12.83 0.01310616 0.593824228 0.389711613 -1 1 0 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 13774428 13774433 + X_13774428_13774433_+ 0.643396556 0.999998922 0.821697739 0.252155905 rdgB FBtr0301532|FBtr0301532|FBtr0301532 13773981|13773981|13773981 13775189|13775189|13775189 X + 13774388 13774453 3'utr rdgB FlyBase G61263.1 ATTCCATTGGAAACTGCTTTGTTGGTGTTTAGACATTTTTCTGTGACTTTCTGTTGTTCTCTGTTT 8 13774449 0.99426576 5 7 92 0.777777778 0.84509804 0.111111111 0.125 0.222222222 8 2 0 7 X:13774388-13774453 6 rdgB FBtr0301532|FBtr0301532|FBtr0301532 13773981|13773981|13773981 13775189|13775189|13775189 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X + 13774395 13774452 3'utr rdgB FlyBase G46265.1 TGGAAACTGCTTTGTTGGTGTTTAGACATTTTTCTGTGACTTTCTGTTGTTCTCTGTT 6 13774437 0.992424449 6 6 75 1 1 0.5 0.333333333 0.6 6 0 0 10 X:13774395-13774452 6 6 3218 FBgn0003218 381.5 8.42 12.83 0.015727392 0.712589074 0.467653936 -21 -9 -15 0.2 dme-miR-8-3p 6mer2-7 AGTATT X 13780036 13780041 - X_13780036_13780041_- 0.98131275 0.985696009 0.983504379 0.003099461 CtsB1 FBtr0073838|FBtr0346091 13780014|13779845 13780176|13780176 X - 13780015 13780130 3'utr CtsB1 FlyBase G67327.1 ATTTTCTATCATCCCTCCTTTTATTTTCATTCCGATTCGCAACTGACGTTTGTAGTTAATGTAAACAACCTAAACCTGATTGATAATAAAGTATTGTATATGACTGTGGAACTGTA 221 13780060 0.897414174 26 207 1495 0.925531915 1.51355052 0.088652482 0.20361991 0.375886525 221 14 7 261 X:13780015-13780130 6 CtsB1 FBtr0346091|FBtr0073838 13779845|13780014 13780176|13780176 AGTATT 6mer2-7 dme-miR-8-3p X - 13780015 13780130 3'utr CtsB1 FlyBase G50687.1 ATTTTCTATCATCCCTCCTTTTATTTTCATTCCGATTCGCAACTGACGTTTGTAGTTAATGTAAACAACCTAAACCTGATTGATAATAAAGTATTGTATATGACTGTGGAACTGTA 136 13780051 0.81546364 23 128 896 0.930348259 2.271841607 0.084577114 0.338235294 0.552238806 136 14 0 187 X:13780015-13780130 6 76.5 3219 FBgn0030521 559.3 47.37666667 71.83333333 0.136778116 1.614718919 1.064965197 19 10 14.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 13807165 13807171 + X_13807165_13807171_+ 0.66157516 0.661615504 0.661595332 2.85E-05 inaE FBtr0073826 13805478 13807627 X + 13807148 13807187 3'utr inaE FlyBase G61282.1 AATTATGTTAAACGTTATCTAGTCTAAGGCCAACTATCGC 7 13807172 0.973002182 4 7 45 1 0.84509804 0 0 0 7 0 0 7 X:13807148-13807187 7 inaE FBtr0073826 13805478 13807627 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X + 13807152 13807187 3'utr inaE FlyBase G46278.1 ATGTTAAACGTTATCTAGTCTAAGGCCAACTATCGC 5 13807172 0.970308173 3 4 29 1 0.903089987 0 0.4 0.625 5 0 0 8 X:13807152-13807187 7 5 3220 FBgn0261244 812.34 24.45 37.46 0.006155058 0.204498978 0.133475707 -7 -7 -7 0.2 dme-miR-1012-3p 6mer3-8 TTGACT X 13813411 13813416 - X_13813411_13813416_- 0.476979144 0.723355034 0.600167089 0.17421407 Clic FBtr0073835 13812969 13813727 X - 13813391 13813444 3'utr Clic FlyBase G67339.1 ACACCAGCCACAATCTATCGAGAAGGCTTTGACTTACTTGGCCCGCCTGCATGT 32 13813407 0.960403298 7 30 198 0.95 1.579783597 0.3 0.1875 0.35 32 2 0 38 X:13813391-13813444 6 Clic FBtr0073835 13812969 13813727 TTGACT 6mer3-8 dme-miR-1012-3p X - 13813392 13813430 3'utr Clic FlyBase G50698.1 CTATCGAGAAGGCTTTGACTTACTTGGCCCGCCTGCATG 21 13813407 0.736937256 6 20 130 0.96 1.380211242 0.36 0.19047619 0.32 21 1 0 24 X:13813392-13813430 6 25.5 3221 FBgn0030529 12555.19667 953.18 1456.586667 0.002031032 0.026752555 0.017506682 -9 -9 -9 0.2 dme-miR-8-3p 6mer2-7 AGTATT X 13831402 13831407 - X_13831402_13831407_- 0.724359176 0.509374399 0.616866787 0.15201721 AMPdeam FBtr0309245 13830739 13834641 X - 13831344 13831525 5'utr AMPdeam FlyBase G67370.1 CTGTTGCGCAAAGTGCCCGTGCTGCAGTATCTGTATTATCTGACCCAGATTGGCATCGCCATGTCGCCGCTGTCGAACAACTCCCTGTTCCTCAACTATCATCGCAATCCGCTGCCAGAGTATTTGGCCCGTGGCCTCATCATTTCCCTCTCCACGGATGATCCCTTGCAATTCCACTTCAC 103 13831418 0.855457579 23 98 665 0.960629921 1.785329835 0.173228346 0.184466019 0.338582677 103 4 1 122 X:13831344-13831525 6 AMPdeam FBtr0309245 13830739 13834641 AGTATT 6mer2-7 dme-miR-8-3p X - 13831386 13831521 5'utr AMPdeam FlyBase G50721.1 TGCGCAAAGTGCCCGTGCTGCAGTATCTGTATTATCTGACCCAGATTGGCATCGCCATGTCGCCGCTGTCGAACAACTCCCTGTTCCTCAACTATCATCGCAATCCGCTGCCAGAGTATTTGGCCCGTGGCCTCAT 53 13831418 0.86398262 14 46 322 0.886075949 1.84509804 0.215189873 0.377358491 0.582278481 53 9 0 70 X:13831386-13831521 6 34.5 3222 FBgn0052626 1047.716667 41.85666667 63.94666667 0.03292875 0.824241459 0.539512093 11 11 11 0.2 dme-miR-305-5p 8mer-m1 AGTACAAT X 13832301 13832308 - X_13832301_13832308_- 0.564705343 0.570344403 0.567524873 0.003987446 AMPdeam FBtr0309245 13830739 13834641 X - 13832279 13832366 5'utr AMPdeam FlyBase G67376.1 ATGTTGGACGTCCATGCCGATCGCAACACGTTCCATCGCTTCGACAAGTTTAACTCCAAGTACAATCCCATCGGGGAGTCGCGGCTCA 17 13832302 0.847476229 7 13 83 0.789473684 0.698970004 0.157894737 0.058823529 0.157894737 17 2 2 15 X:13832279-13832366 8 AMPdeam FBtr0309245 13830739 13834641 AGTACAAT 8mer-m1 dme-miR-305-5p X - 13832224 13832320 5'utr AMPdeam FlyBase G50726.1 AGTTTAACTCCAAGTACAATCCCATCGGGGAGTCGCGGCTCAGGGAAGTCTTCCTGAAGACGGACAACTATCTGAATGGCAAATACTTTGCACAGAT 12 13832297 0.957759835 9 12 60 1 1.278753601 0 0.416666667 0.631578947 12 0 0 19 X:13832224-13832320 8 7.5 3223 FBgn0052626 1047.716667 41.85666667 63.94666667 0.007158424 0.179182926 0.117285238 -6 -11 -8.5 0.2 dme-miR-1008-3p 7mer-m8 AGCTGTG X 13851202 13851208 - X_13851202_13851208_- 0.625979135 0.642813769 0.634396452 0.011903931 mamo FBtr0346001|FBtr0346002 13846114|13850846 13854098|13854098 X - 13851188 13851222 3'utr mamo FlyBase G67389.1 AACAACAAGCTGTGAGCTGTGTATGTGAATGAATT 7 13851195 0.818136081 6 7 43 1 0.903089987 0.375 0.142857143 0.25 7 0 0 8 X:13851188-13851222 7 mamo FBtr0346001|FBtr0346002 13846114|13850846 13854098|13854098 AGCTGTG 7mer-m8 dme-miR-1008-3p X - 13851189 13851231 3'utr mamo FlyBase G50738.1 AACAACAACAACAACAAGCTGTGAGCTGTGTATGTGAATGAAT 5 13851205 0.958484462 3 5 27 1 0.77815125 0 0.2 0.333333333 5 0 0 6 X:13851189-13851231 7 6 3224 FBgn0267033 6198.503333 82.32 126.9666667 0.000967976 0.072886297 0.047256498 -13 -3 -8 0.2 dme-miR-305-5p 7mer-A1 GTACAAA X 13853450 13853456 - X_13853450_13853456_- 0.782690861 0.779792135 0.781241498 0.002049761 mamo FBtr0346001|FBtr0346002 13846114|13850846 13854098|13854098 X - 13853443 13853493 3'utr mamo FlyBase G67397.1 TTTACACCGATCTATAGAAGCTAACTAGCAACAATTTGTACAAAACAAACA 17 13853458 0.879365182 4 17 80 1 1.255272505 0.055555556 0.058823529 0.111111111 17 0 0 18 X:13853443-13853493 7 mamo FBtr0346001|FBtr0346002 13846114|13850846 13854098|13854098 GTACAAA 7mer-A1 dme-miR-305-5p X - 13853444 13853491 3'utr mamo FlyBase G50744.1 TACACCGATCTATAGAAGCTAACTAGCAACAATTTGTACAAAACAAAC 10 13853458 0.937335942 4 10 43 1 1.176091259 0 0.3 0.533333333 10 0 0 15 X:13853444-13853491 7 8.5 3225 FBgn0267033 6198.503333 82.32 126.9666667 0.001371299 0.103255588 0.066946705 2 2 2 0.2 dme-miR-282-5p 6mer2-7 GAGGCT X 13860274 13860279 - X_13860274_13860279_- 0.776998148 0.902967531 0.83998284 0.089073817 mamo FBtr0346003 13858015 13869553 X - 13860241 13860291 3'utr mamo FlyBase G67402.1 AAGTTCCCTATTGAGGCTCATTCATAAATAATTTTACGAATAATTTTTAAC 7 13860280 0.979979007 3 7 54 1 0.903089987 0 0.142857143 0.25 7 0 0 8 X:13860241-13860291 6 mamo FBtr0346003 13858015 13869553 GAGGCT 6mer2-7 dme-miR-282-5p X - 13860269 13860295 3'utr mamo FlyBase G50746.1 TTGTAAGTTCCCTATTGAGGCTCATTC 5 13860281 0.711883834 3 5 39 1 1.079181246 0 1 1 5 0 0 12 X:13860269-13860295 6 5.5 3226 FBgn0267033 6198.503333 82.32 126.9666667 0.000887311 0.066812439 0.043318456 1 2 1.5 0.2 dme-miR-1008-3p 7mer-A1 GCTGTGA X 13866926 13866932 - X_13866926_13866932_- 0.816870481 0.81642687 0.816648675 0.000313673 mamo FBtr0346003|FBtr0346006 13858015|13865860 13869553|13869553 X - 13866900 13866957 5'utr mamo FlyBase G67404.1 AAAAACTTTTGGATTAAACAATTTGGCTGTGATAGCATTACAAGAATAGTAAATAATT 71 13866934 0.985963621 9 68 568 0.964285714 1.908485019 0.071428571 0.154929577 0.285714286 71 3 0 81 X:13866900-13866957 7 mamo FBtr0346003|FBtr0346006 13858015|13865860 13869553|13869553 GCTGTGA 7mer-A1 dme-miR-1008-3p X - 13866900 13866949 5'utr mamo FlyBase G50747.1 TTGGATTAAACAATTTGGCTGTGATAGCATTACAAGAATAGTAAATAATT 38 13866934 0.869907644 8 35 255 0.9 1.176091259 0.18 0.263157895 0.44 38 3 2 45 X:13866900-13866949 7 53 3227 FBgn0267033 6198.503333 82.32 126.9666667 0.008550451 0.64382896 0.417432397 2 2 2 0.2 dme-bantam-3p 7mer-A1 GATCTCA X 13867332 13867338 - X_13867332_13867338_- 0.796069198 0.820757292 0.808413245 0.017457123 mamo FBtr0346003|FBtr0346006 13858015|13865860 13869553|13869553 X - 13867313 13867352 5'utr mamo FlyBase G67405.1 AAGAAATGCAAATCGATCTCAAAATTATAAACAAATGAAA 47 13867340 0.841370012 4 46 221 0.964285714 1.73239376 0.142857143 0.14893617 0.285714286 47 2 0 54 X:13867313-13867352 7 mamo FBtr0346003|FBtr0346006 13858015|13865860 13869553|13869553 GATCTCA 7mer-A1 dme-bantam-3p X - 13867320 13867393 5'utr mamo FlyBase G50748.1 ACTTAGGTGATTAGCCCGGCAACAACAGCAAACGAAACAACAAGAAATGCAAATCGATCTCAAAATTATAAACA 22 13867345 0.961314377 4 22 109 1 1.491361694 0.161290323 0.272727273 0.483870968 22 0 0 31 X:13867320-13867393 7 33.5 3228 FBgn0267033 6198.503333 82.32 126.9666667 0.00540453 0.406948494 0.263848779 2 7 4.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-m8 CTGTGAT X 13867828 13867834 - X_13867828_13867834_- 0.586994341 0.525801986 0.556398164 0.04326949 mamo FBtr0346003|FBtr0346003|FBtr0346003|FBtr0346006|FBtr0346006|FBtr0346006 13858015|13858015|13858015|13865860|13865860|13865860 13869553|13869553|13869553|13869553|13869553|13869553 X - 13867806 13867864 5'utr mamo FlyBase G67406.1 AAGCAGCAGCAGCAGAATTACATAGAATATCTGTGATCTTAACGATATTTATAAAAAAC 126 13867835 0.987236358 7 118 1070 0.937062937 2.127104798 0.111888112 0.119047619 0.223776224 126 9 0 134 X:13867806-13867864 7 mamo FBtr0346003|FBtr0346003|FBtr0346003|FBtr0346006|FBtr0346006|FBtr0346006 13858015|13858015|13858015|13865860|13865860|13865860 13869553|13869553|13869553|13869553|13869553|13869553 CTGTGAT 7mer-m8 "dme-miR-2a-3p,dme-miR-2b-3p" X - 13867808 13867858 5'utr mamo FlyBase G50749.1 CAGCAGCAGAATTACATAGAATATCTGTGATCTTAACGATATTTATAAAAA 88 13867835 0.738477231 5 84 749 0.971223022 1.829303773 0.115107914 0.420454545 0.633093525 88 3 1 135 X:13867808-13867858 7 105.5 3229 FBgn0267033 6198.503333 82.32 126.9666667 0.017020238 1.281584062 0.830926752 1 1 1 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA X 1392563 1392570 + X_1392563_1392570_+ 0.48465799 0.491687061 0.488172525 0.004970324 CG32813 FBtr0330319|FBtr0070222|FBtr0342737|FBtr0342736|FBtr0070219|FBtr0330317|FBtr0330320|FBtr0342735 1391564|1391564|1391564|1391564|1391564|1391564|1391564|1391564 1392843|1392843|1392843|1392843|1392843|1392843|1392843|1392843 X + 1392537 1392581 3'utr CG32813 FlyBase G57945.1 CATTGAAGGAACTGTAGCTAATTTATGTACTTAATGAACCAGTGA 26 1392562 0.752432733 2 26 255 1 1.462397998 0.172413793 0.115384615 0.206896552 26 0 0 29 X:1392537-1392581 8 CG32813 FBtr0342737|FBtr0330319|FBtr0342736|FBtr0330320|FBtr0070222|FBtr0330317|FBtr0070219|FBtr0342735 1391564|1391564|1391564|1391564|1391564|1391564|1391564|1391564 1392843|1392843|1392843|1392843|1392843|1392843|1392843|1392843 GTACTTAA 8mer-A1 dme-miR-252-5p X + 1392540 1392583 3'utr CG32813 FlyBase G43842.1 TGAAGGAACTGTAGCTAATTTATGTACTTAATGAACCAGTGAAA 22 1392562 0.72588109 3 22 203 1 1.568201724 0.108108108 0.363636364 0.621621622 22 0 0 37 X:1392540-1392583 8 24 3230 FBgn0052813 73.22 2.636666667 4.1 0.327779295 9.102402023 5.853658537 1 1 1 0.2 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC X 1392625 1392630 + X_1392625_1392630_+ 0.972909723 0.973677086 0.973293404 0.000542634 CG32813 FBtr0330319|FBtr0070222|FBtr0342737|FBtr0342736|FBtr0070219|FBtr0330317|FBtr0330320|FBtr0342735 1391564|1391564|1391564|1391564|1391564|1391564|1391564|1391564 1392843|1392843|1392843|1392843|1392843|1392843|1392843|1392843 X + 1392604 1392667 3'utr CG32813 FlyBase G57946.1 GGTGTAAAGAGAAGAAACTTGCTAGTCGCCGCTGCATAACTGTGTAAATGTGGCACACAAACCA 22 1392623 0.946083067 3 21 90 0.962962963 1.414973348 0.444444444 0.227272727 0.37037037 22 1 0 26 X:1392604-1392667 6 CG32813 FBtr0342737|FBtr0330319|FBtr0342736|FBtr0330320|FBtr0070222|FBtr0330317|FBtr0070219|FBtr0342735 1391564|1391564|1391564|1391564|1391564|1391564|1391564|1391564 1392843|1392843|1392843|1392843|1392843|1392843|1392843|1392843 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" X + 1392603 1392640 3'utr CG32813 FlyBase G43843.1 TGGTGTAAAGAGAAGAAACTTGCTAGTCGCCGCTGCAT 11 1392623 0.937397908 2 11 45 1 1.176091259 0.6 0.181818182 0.4 11 0 0 15 X:1392603-1392640 6 16 3231 FBgn0052813 73.22 2.636666667 4.1 0.21851953 6.068268015 3.902439024 2 2 2 0.2 dme-miR-34-5p 7mer-m8 CACTGCC X 1395468 1395474 + X_1395468_1395474_+ 0.703846255 0.707577563 0.705711909 0.002638428 CG11448 FBtr0332291|FBtr0070225 1395374|1395374 1397337|1397337 X + 1395397 1395496 3'utr CG11448 FlyBase G57951.1 TTGGCGTGCATTTCACTTTTCGTTTGTTTTCTGTTTTTCCGTTTCCGTTCCATTCCGTTCCGTTCCGTTTGCACTGCCCCCCGCACCCCTGCATCTTGCA 192 1395450 0.99058932 17 185 1899 0.948497854 1.566241023 0.201716738 0.1875 0.330472103 192 7 5 221 X:1395397-1395496 7 CG11448 FBtr0070225|FBtr0332291 1395374|1395374 1397337|1397337 CACTGCC 7mer-m8 dme-miR-34-5p X + 1395394 1395494 3'utr CG11448 FlyBase G43848.1 GAGTTGGCGTGCATTTCACTTTTCGTTTGTTTTCTGTTTTTCCGTTTCCGTTCCATTCCGTTCCGTTCCGTTTGCACTGCCCCCCGCACCCCTGCATCTTG 142 1395450 0.990163311 15 133 1333 0.936651584 1.713910354 0.199095023 0.401408451 0.615384615 142 11 3 207 X:1395394-1395494 7 46 3232 FBgn0024985 122.6666667 3.986666667 6.07 0.375 11.53846154 7.578253707 18 18 18 0.2 dme-miR-305-3p 6mer2-7 TGTGCC X 1395641 1395646 + X_1395641_1395646_+ 0.762362575 0.76254441 0.762453492 0.000128552 CG11448 FBtr0332291|FBtr0070225 1395374|1395374 1397337|1397337 X + 1395526 1395665 3'utr CG11448 FlyBase G57952.1 ACGTCTTACGATTACGTTTACATTTAGTTTAGGCAACAGCCTGTATCTGACCCTGTCCCTCGCCATTCACCTGCTCCGCCTGAGCTGTACATACATAGTTTACACACTCGATTGCTGTGCCCTCATAATTCTAAGTTGTT 1174 1395637 0.923214846 21 1166 9428 0.993621545 2.845718018 0.029057406 0.160988075 0.301913536 1174 8 1 1402 X:1395526-1395665 6 CG11448 FBtr0070225|FBtr0332291 1395374|1395374 1397337|1397337 TGTGCC 6mer2-7 dme-miR-305-3p X + 1395526 1395664 3'utr CG11448 FlyBase G43849.1 ACGTCTTACGATTACGTTTACATTTAGTTTAGGCAACAGCCTGTATCTGACCCTGTCCCTCGCCATTCACCTGCTCCGCCTGAGCTGTACATACATAGTTTACACACTCGATTGCTGTGCCCTCATAATTCTAAGTTGT 807 1395637 0.90858251 22 799 6322 0.990909091 2.514547753 0.028030303 0.416356877 0.643181818 807 9 3 1308 X:1395526-1395664 6 945 3233 FBgn0024985 122.6666667 3.986666667 6.07 7.703804348 237.0401338 155.6836903 4 4 4 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 1396725 1396731 + X_1396725_1396731_+ 0.623682049 0.681896047 0.652789048 0.041163514 CG11448 FBtr0332292|FBtr0332291|FBtr0070225 1395684|1395374|1395374 1397337|1397337|1397337 X + 1396668 1396743 3'utr CG11448 FlyBase G57959.1 AAAGCGAGGAAACTCCGTTTACATATCAGCTCCATCGCTATCGTCGATGCGAACGTGCCAAAGACTAATGGTCAGA 13 1396723 0.9652599 5 12 66 1 1.113943352 0 0 0 13 0 0 13 X:1396668-1396743 7 CG11448 FBtr0070225|FBtr0332291|FBtr0332292 1395374|1395374|1395684 1397337|1397337|1397337 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X + 1396678 1396746 3'utr CG11448 FlyBase G43853.1 AACTCCGTTTACATATCAGCTCCATCGCTATCGTCGATGCGAACGTGCCAAAGACTAATGGTCAGACCC 11 1396723 0.940431637 4 10 45 0.933333333 0.84509804 0.2 0.272727273 0.466666667 11 0 1 14 X:1396678-1396746 7 7.5 3234 FBgn0024985 122.6666667 3.986666667 6.07 0.061141304 1.881270903 1.235584843 2 2 2 0.2 dme-miR-8-3p 6mer2-7 AGTATT X 1396976 1396981 + X_1396976_1396981_+ 0.998905755 0.985506826 0.99220629 0.009474524 CG11448 FBtr0332292|FBtr0332291|FBtr0070225 1395684|1395374|1395374 1397337|1397337|1397337 X + 1396953 1397059 3'utr CG11448 FlyBase G57961.1 GAAAAGAAGATGGAGAGAAATTGAGTATTTGGTGAATTAATGTTAACTAAATTTATATACACATATACACATGCATTATACATAATATACTTTACTATATACTATGT 41 1396974 0.982932592 17 40 307 0.98 1.69019608 0.18 0.170731707 0.32 41 1 0 49 X:1396953-1397059 6 CG11448 FBtr0070225|FBtr0332291|FBtr0332292 1395374|1395374|1395684 1397337|1397337|1397337 AGTATT 6mer2-7 dme-miR-8-3p X + 1396956 1397012 3'utr CG11448 FlyBase G43855.1 AAGAAGATGGAGAGAAATTGAGTATTTGGTGAATTAATGTTAACTAAATTTATATAC 31 1396974 0.7763504 10 28 264 0.905660377 1.681241237 0.113207547 0.548387097 0.735849057 31 5 0 48 X:1396956-1397012 6 29.5 3235 FBgn0024985 122.6666667 3.986666667 6.07 0.24048913 7.399665552 4.859967051 2 2 2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 13999271 13999276 + X_13999271_13999276_+ 0.730877232 0.730900796 0.730889014 1.67E-05 ben FBtr0307296|FBtr0307296|FBtr0307296|FBtr0332844|FBtr0332844|FBtr0332844|FBtr0073855|FBtr0073855|FBtr0073855|FBtr0332843|FBtr0332843|FBtr0332843 13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615 13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805 X + 13999254 13999295 3'utr ben FlyBase G61311.1 TTTCAGAAAATTTAAGATGTGATCGTCCAACTTGTAGACTTT 10 13999266 0.888634882 5 8 77 0.916666667 1.041392685 0 0.2 0.333333333 10 1 0 11 X:13999254-13999295 6 ben FBtr0332843|FBtr0332843|FBtr0332843|FBtr0332844|FBtr0332844|FBtr0332844|FBtr0073855|FBtr0073855|FBtr0073855|FBtr0307296|FBtr0307296|FBtr0307296 13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615 13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X + 13999257 13999298 3'utr ben FlyBase G46304.1 CAGAAAATTTAAGATGTGATCGTCCAACTTGTAGACTTTACT 9 13999267 0.850713566 5 9 61 1 1.230448921 0.176470588 0.666666667 0.823529412 9 0 0 17 X:13999257-13999298 6 8.5 3236 FBgn0000173 1034.81 74.77333333 113.92 0.008214068 0.11367689 0.074613764 5 4 4.5 0.2 dme-miR-1006-3p 7mer-A1 GAATTTA X 14232321 14232327 - X_14232321_14232327_- 0.750864933 0.818690379 0.784777656 0.047959871 CG42271 FBtr0299614 14232280 14232720 X - 14232315 14232386 3'utr CG42271 FlyBase G67433.1 TGTAAACTTATGTGTAATCCCATCGGGAGCTGGTGTTGCATTGCGTTCCATGTGATTATGAATTTATTCTTG 8 14232330 0.99184049 5 7 72 0.888888889 0.903089987 0.333333333 0.125 0.222222222 8 1 0 8 X:14232315-14232386 7 CG42271 FBtr0299614 14232280 14232720 GAATTTA 7mer-A1 dme-miR-1006-3p X - 14232311 14232356 3'utr CG42271 FlyBase G50767.1 TGGTGTTGCATTGCGTTCCATGTGATTATGAATTTATTCTTGGAAT 6 14232328 0.983788489 4 5 41 0.9 0.954242509 0.4 0.5 0.7 6 1 0 9 X:14232311-14232356 7 3 3237 FBgn0259166 258.3166667 15.79666667 24.03666667 0.011613652 0.189913484 0.124809319 3 1 2 0.2 dme-miR-92b-3p 6mer2-7 TGCAAT X 14240016 14240021 + X_14240016_14240021_+ 0.662109822 0.604174234 0.633142028 0.040966656 CG1434 FBtr0073903|FBtr0339437 14239922|14239922 14240152|14240152 X + 14240008 14240100 3'utr CG1434 FlyBase G61334.1 TTGATTATTGCAATGGCTGTTGCAACTGCCTTAGGTGCTGGGAGCAGTATCTGGACTACCTCCATTGGGTTAACAAAGTTTGCATCTGAATAA 17 14240021 0.984598791 10 15 117 0.894736842 1.230448921 0.368421053 0.117647059 0.210526316 17 2 0 17 X:14240008-14240100 6 CG1434 FBtr0073903|FBtr0339437 14239922|14239922 14240152|14240152 TGCAAT 6mer2-7 dme-miR-92b-3p X + 14240010 14240070 3'utr CG1434 FlyBase G46320.1 GATTATTGCAATGGCTGTTGCAACTGCCTTAGGTGCTGGGAGCAGTATCTGGACTACCTCC 10 14240021 0.81496564 3 9 56 1 1.301029996 0.25 0.6 0.8 10 0 0 20 X:14240010-14240070 6 7.5 3238 FBgn0030554 88.66666667 6.353333333 9.766666667 0.084586466 1.180482686 0.767918089 -5 -5 -5 0.2 dme-miR-1012-3p 6mer3-8 TTGACT X 14258453 14258458 + X_14258453_14258458_+ 0.999996337 0.999967982 0.999982159 2.00E-05 mud FBtr0332622|FBtr0308325|FBtr0308329|FBtr0308327|FBtr0308328 14258229|14258229|14258383|14258229|14256264 14258595|14258595|14258595|14258595|14258595 X + 14258367 14258474 stop_codon mud FlyBase G61371.1 ATGTTCAAGCGCAAGTAGGCGTGGTCGCAGTCGCAGTATTATACATATATTCCCCCATTCGTGTACATCAATCGGAACTTGAATTCTTGACTTATTATTTATGTAACC 48 14258453 0.985231866 14 47 391 0.980769231 1.707570176 0.057692308 0.083333333 0.153846154 48 1 0 51 X:14258367-14258474 6 mud FBtr0308327|FBtr0308325|FBtr0308329|FBtr0308328|FBtr0332622 14258229|14258229|14258383|14256264|14258229 14258595|14258595|14258595|14258595|14258595 TTGACT 6mer3-8 dme-miR-1012-3p X + 14258374 14258474 stop_codon mud FlyBase G46345.1 AGCGCAAGTAGGCGTGGTCGCAGTCGCAGTATTATACATATATTCCCCCATTCGTGTACATCAATCGGAACTTGAATTCTTGACTTATTATTTATGTAACC 36 14258453 0.86437693 11 32 294 0.919354839 1.45484486 0.032258065 0.472222222 0.693548387 36 4 1 57 X:14258374-14258474 6 20 3239 FBgn0002873 2508.803333 43.92333333 67.46333333 0.007971928 0.455338848 0.296457335 0 0 0 0.2 dme-miR-33-5p 7mer-A1 AATGCAA X 14258564 14258570 + X_14258564_14258570_+ 0.73527964 0.685744003 0.710511821 0.035026959 mud FBtr0332622|FBtr0308325|FBtr0308329|FBtr0308327|FBtr0308328 14258229|14258229|14258383|14258229|14256264 14258595|14258595|14258595|14258595|14258595 X + 14258486 14258576 3'utr mud FlyBase G61372.1 TTTTGTACATCAGGACTTAGAGAGTTTAGTTTAAGTATGCATATGTTGCAGTGGTACAATATCGTGGGCGAACATAATAATGCAAATAAAA 13 14258563 0.963740803 7 12 66 0.923076923 1.079181246 0.230769231 0 0 13 1 0 12 X:14258486-14258576 7 mud FBtr0308327|FBtr0308325|FBtr0308329|FBtr0308328|FBtr0332622 14258229|14258229|14258383|14256264|14258229 14258595|14258595|14258595|14258595|14258595 AATGCAA 7mer-A1 dme-miR-33-5p X + 14258531 14258582 3'utr mud FlyBase G46346.2 TTGCAGTGGTACAATATCGTGGGCGAACATAATAATGCAAATAAAATTGTCT 10 14258563 0.970490291 5 9 43 0.823529412 1.146128036 0.176470588 0.5 0.705882353 10 3 0 14 X:14258531-14258582 7 8 3240 FBgn0002873 2508.803333 43.92333333 67.46333333 0.003188771 0.182135539 0.118582934 1 1 1 0.2 dme-miR-184-3p 8mer-A1 TCCGTCCA X 1455334 1455341 - X_1455334_1455341_- 0.384591995 0.39610333 0.390347662 0.008139718 CG14785 FBtr0070231 1455213 1455406 X - 1455313 1455369 3'utr CG14785 FlyBase G64003.1 ACTTCTGGGCAGTCGTGATTCTGTCAGTTCCGTCCATTGTCCTTTGCCGTGTCCATG 71 1455342 0.842382144 6 69 661 0.978947368 1.968482949 0.136842105 0.211267606 0.410526316 71 2 0 93 X:1455313-1455369 8 CG14785 FBtr0070231 1455213 1455406 TCCGTCCA 8mer-A1 dme-miR-184-3p X - 1455322 1455365 3'utr CG14785 FlyBase G48245.1 CTGGGCAGTCGTGATTCTGTCAGTTCCGTCCATTGTCCTTTGCC 34 1455342 0.818402752 4 33 305 0.958333333 1.662757832 0.1875 0.352941176 0.541666667 34 2 0 46 X:1455322-1455365 8 51 3241 FBgn0027795 22.33333333 1.63 2.503333333 2.28358209 31.28834356 20.37283622 1 1 1 0.2 dme-miR-282-5p 7mer-m8 AGAGGCT X 1478389 1478395 + X_1478389_1478395_+ 0.401496984 0.365075633 0.383286309 0.025753819 mei-38 FBtr0070258|FBtr0339588 1478255|1478255 1478482|1478482 X + 1478323 1478409 3'utr mei-38 FlyBase G57976.1 TGTGATGTGTGCTGCTGGTTTAGGTGGTTTCTTAGCAACTGACCGTGTGTTTAGTCATTAACTTGAAGAGGCTTAGTTGTTCCTACA 21 1478397 0.704970433 11 21 175 1 1.447158031 0.178571429 0.285714286 0.464285714 21 0 0 28 X:1478323-1478409 7 mei-38 FBtr0070258|FBtr0339588 1478255|1478255 1478482|1478482 AGAGGCT 7mer-m8 dme-miR-282-5p X + 1478328 1478405 3'utr mei-38 FlyBase G43863.1 TGTGTGCTGCTGGTTTAGGTGGTTTCTTAGCAACTGACCGTGTGTTTAGTCATTAACTTGAAGAGGCTTAGTTGTTCC 13 1478396 0.9491711 7 11 100 0.888888889 1.204119983 0.333333333 0.307692308 0.5 13 2 0 16 X:1478328-1478405 7 10.5 3242 FBgn0260986 265.3966667 24.39333333 37.29666667 0.039563421 0.430445477 0.281526499 -8 -7 -7.5 0.2 dme-bantam-3p 6mer3-8 TGATCT X 14788749 14788754 - X_14788749_14788754_- 0.968133237 0.962806735 0.965469986 0.003766404 rut FBtr0340467|FBtr0333656|FBtr0333655|FBtr0333654|FBtr0305581|FBtr0073992|FBtr0333657 14787476|14787476|14787476|14787476|14787476|14787476|14787476 14789669|14790548|14789669|14789669|14789669|14789669|14790548 X - 14788742 14788780 3'utr rut FlyBase G67465.1 CGCCCGTGCCCCACGCCAAGCGTCTTTGATCTTAAATGT 5 14788754 0.975080645 2 4 30 1 0.698970004 0.2 0 0 5 0 0 5 X:14788742-14788780 6 rut FBtr0073992|FBtr0333657|FBtr0333654|FBtr0305581|FBtr0333655|FBtr0340467|FBtr0333656 14787476|14787476|14787476|14787476|14787476|14787476|14787476 14789669|14790548|14789669|14789669|14789669|14789669|14790548 TGATCT 6mer3-8 dme-bantam-3p X - 14788739 14788767 3'utr rut FlyBase G50788.1 CGCCAAGCGTCTTTGATCTTAAATGTATG 8 14788754 0.695109832 2 8 61 1 1 0.1 0.25 0.4 8 0 0 10 X:14788739-14788767 6 6 3243 FBgn0003301 229.9033333 3.326666667 5.11 0.026097925 1.803607214 1.174168297 0 0 0 0.2 dme-miR-14-3p 6mer2-7 AGACTG X 14788934 14788939 - X_14788934_14788939_- 0.842545736 0.968221885 0.905383811 0.088866493 rut FBtr0340467|FBtr0333656|FBtr0333655|FBtr0333654|FBtr0305581|FBtr0073992|FBtr0333657 14787476|14787476|14787476|14787476|14787476|14787476|14787476 14789669|14790548|14789669|14789669|14789669|14789669|14790548 X - 14788922 14788961 3'utr rut FlyBase G67466.1 TTTAAGGCTATAAATTGCCCATAGACTGCTCCACCACCAT 24 14788940 0.847247003 4 23 114 0.964285714 1.431363764 0 0.125 0.25 24 1 0 27 X:14788922-14788961 6 rut FBtr0073992|FBtr0333657|FBtr0333654|FBtr0305581|FBtr0333655|FBtr0340467|FBtr0333656 14787476|14787476|14787476|14787476|14787476|14787476|14787476 14789669|14790548|14789669|14789669|14789669|14789669|14790548 AGACTG 6mer2-7 dme-miR-14-3p X - 14788924 14788951 3'utr rut FlyBase G50789.1 TAAATTGCCCATAGACTGCTCCACCACC 12 14788940 0.786874972 4 11 49 0.9375 1.176091259 0 0.25 0.4375 12 1 0 15 X:14788924-14788951 6 18 3244 FBgn0003301 229.9033333 3.326666667 5.11 0.078293776 5.410821643 3.522504892 1 1 1 0.2 dme-miR-282-5p 6mer2-7 GAGGCT X 1480438 1480443 + X_1480438_1480443_+ 0.995284587 0.996529845 0.995907216 0.000880489 rush FBtr0339589 1480188 1481420 X + 1480421 1480466 5'utr rush FlyBase G57986.1 AAGGACGTGCAAAATTTGAGGCTTATCGAGTTCTAAGTTGGGAGAG 31 1480437 0.761585231 4 30 208 0.972222222 1.544068044 0.027777778 0.161290323 0.277777778 31 1 0 35 X:1480421-1480466 6 rush FBtr0339589 1480188 1481420 GAGGCT 6mer2-7 dme-miR-282-5p X + 1480360 1480457 5'utr rush FlyBase G43870.1 TCTTCATTGCAAGACCTTCGGACCCAATTTCGGATCTTTCATTATACCTATGCGTTAGATAAAGGACGTGCAAAATTTGAGGCTTATCGAGTTCTAAG 21 1480437 0.979291784 8 20 140 1 1.505149978 0.125 0.428571429 0.625 21 0 0 32 X:1480360-1480457 6 22 3245 FBgn0025381 3553.903333 199.46 304.35 0.006190377 0.110297804 0.072285198 1 1 1 0.2 dme-miR-305-5p 7mer-A1 GTACAAA X 1481381 1481387 + X_1481381_1481387_+ 0.779108804 0.780930619 0.780019712 0.001288207 rush FBtr0070259|FBtr0339589 1480188|1480188 1481420|1481420 X + 1481262 1481420 3'utr rush FlyBase G57989.1 GTTCCCGTTTTTGGCGGATAAGAACCACTAAAATCGTATGTTTGGCGAGAGGATAAACTATATGGATATGTATACAACATAAGCAATTTGCAATTGCGATCATTAACTGTTTTCTATTTGTACAAAGCCCAAAAAACAATAAATTAATACTGTAAATTG 95 1481379 0.986358411 23 87 743 0.930434783 1.427323786 0.086956522 0.168421053 0.313043478 95 5 3 107 X:1481262-1481420 7 rush FBtr0070259|FBtr0339589 1480188|1480188 1481420|1481420 GTACAAA 7mer-A1 dme-miR-305-5p X + 1481018 1481399 3'utr rush FlyBase G43871.1 AACGGAAGCGATGCGAGCAGGAGGAGATTAAGGAGCTGCGCAAGATGACGGCATTCAAGGCTCGTCCGAATCCATTTAAATAGTGCTCGACGGAACCAATCGACTACCAAACGTTTGATAGCCCTGTCCAAATTTAAATGAAGTGAAGTCGATGCTACACATAATCGTGTTTACCGATGCATAGTTTTACCAGATTAACACAATTTTTGTCTCTTAACATTAACATTACTTTTACGCATATATCGTTCCCGTTTTTGGCGGATAAGAACCACTAAAATCGTATGTTTGGCGAGAGGATAAACTATATGGATATGTATACAACATAAGCAATTTGCAATTGCGATCATTAACTGTTTTCTATTTGTACAAAGCCCAAAAAACA 146 1481378 0.991576417 53 137 1106 0.948356808 2.305351369 0.079812207 0.363013699 0.563380282 146 11 0 202 X:1481018-1481399 7 31.5 3246 FBgn0025381 3553.903333 199.46 304.35 0.008863494 0.157926401 0.103499261 2 3 2.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA X 14827158 14827164 - X_14827158_14827164_- 0.784865926 0.763916908 0.774391417 0.01481318 CG14408 FBtr0073990|FBtr0339446|FBtr0305580|FBtr0340466 14827056|14827056|14827056|14826865 14827787|14827787|14827787|14827787 X - 14827148 14827183 3'utr CG14408 FlyBase G67476.1 AAAAGCAAATAACTAAATGCTAGTCAACAAAAACGA 41 14827166 0.734298194 3 40 160 0.978723404 1.662757832 0 0.12195122 0.234042553 41 1 0 46 X:14827148-14827183 7 CG14408 FBtr0340466|FBtr0305580|FBtr0339446|FBtr0073990 14826865|14827056|14827056|14827056 14827787|14827787|14827787|14827787 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X - 14827148 14827184 3'utr CG14408 FlyBase G50797.1 AAAAAGCAAATAACTAAATGCTAGTCAACAAAAACGA 29 14827166 0.747366754 2 27 114 0.952380952 1.602059991 0.047619048 0.310344828 0.523809524 29 2 0 40 X:14827148-14827184 7 35 3247 FBgn0030581 268.9266667 10.35333333 15.88666667 0.130147004 3.380553767 2.203105329 2 2 2 0.2 dme-miR-31a-5p 7mer-m8 TCTTGCC X 14851077 14851083 - X_14851077_14851083_- 0.661261833 0.65921356 0.660237696 0.001448296 CG9521 FBtr0073985 14851003 14851256 X - 14851047 14851176 3'utr CG9521 FlyBase G67488.1 ATCACACCTTAAATGCAATGGCCAGTGTAAAATGGGGCTTTAGTTTTAGTTAAGGCCTTCGAAAACTTTTTGTTATTATGTGTAGTAATTCTTTCTTGCCTGAACTGATTCTAGTTTAAGATTTAGTTAT 85 14851081 0.898483573 19 72 801 0.848484848 1.62324929 0.090909091 0.141176471 0.262626263 85 14 1 84 X:14851047-14851176 7 CG9521 FBtr0073985 14851003 14851256 TCTTGCC 7mer-m8 dme-miR-31a-5p X - 14851039 14851103 3'utr CG9521 FlyBase G50803.1 TATTATGTGTAGTAATTCTTTCTTGCCTGAACTGATTCTAGTTTAAGATTTAGTTATATAAGCAT 45 14851081 0.613340139 11 43 437 0.948275862 1.740362689 0.103448276 0.244444444 0.413793103 45 3 0 55 X:14851039-14851103 7 47 3248 FBgn0030588 765.0066667 37.97666667 54.6 0.061437373 1.237602036 0.860805861 -2 -2 -2 0.2 dme-miR-308-3p 7mer-m1 TGTGATT X 14934583 14934589 - X_14934583_14934589_- 0.520954923 0.521031073 0.520992998 5.39E-05 pdgy FBtr0303294|FBtr0343521|FBtr0073972|FBtr0308838 14933668|14934038|14934038|14934038 14934629|14934629|14934629|14934629 X - 14934576 14934612 3'utr pdgy FlyBase G67498.1 CTTCGTAGGCTAAGAAATATTTTTGTGATTTTTTTTT 21 14934591 0.701898922 5 21 265 1 1.397940009 0.12 0.142857143 0.28 21 0 0 25 X:14934576-14934612 7 pdgy FBtr0303294|FBtr0343521|FBtr0073972|FBtr0308838 14933668|14934038|14934038|14934038 14934629|14934629|14934629|14934629 TGTGATT 7mer-m1 dme-miR-308-3p X - 14934578 14934613 3'utr pdgy FlyBase G50810.1 TCTTCGTAGGCTAAGAAATATTTTTGTGATTTTTTT 10 14934591 0.677574682 6 10 121 1 1.113943352 0 0.3 0.461538462 10 0 0 13 X:14934578-14934613 7 15 3249 FBgn0027601 126.1633333 5.696666667 8.713333333 0.118893498 2.633118783 1.721499617 2 2 2 0.2 dme-miR-932-5p 8mer-A1 GGAATTGA X 15032858 15032865 + X_15032858_15032865_+ 0.478686437 0.425886341 0.452286389 0.037335309 be FBtr0073956 15032682 15042060 X + 15032797 15032874 3'utr be FlyBase G61413.1 ATGTAGCGGATATTGATTATTCAATATTTATGATGTAAAGCGACATCGCCAAAATGGTCTCGGAATTGATAATTGTTA 168 15032851 0.94541202 6 168 708 1 2.269512944 0.064516129 0.095238095 0.182795699 168 0 0 186 X:15032797-15032874 8 be FBtr0073956 15032682 15042060 GGAATTGA 8mer-A1 dme-miR-932-5p X + 15032830 15032876 3'utr be FlyBase G46374.1 TGTAAAGCGACATCGCCAAAATGGTCTCGGAATTGATAATTGTTAAT 105 15032851 0.889864131 2 105 417 1 2.204119983 0.01875 0.371428571 0.5875 105 0 0 160 X:15032830-15032876 8 134 3250 FBgn0052594 1740.783333 62.23 95.48 0.07697684 2.153302266 1.403435274 7 7 7 0.2 dme-miR-14-3p 7mer-A1 AGACTGA X 15032899 15032905 + X_15032899_15032905_+ 0.564276328 0.695440511 0.62985842 0.092747095 be FBtr0073956 15032682 15042060 X + 15032880 15032919 3'utr be FlyBase G61414.1 ATTAAAATAACCTTTGCAGAGACTGACCCAAATCCTCAGG 15 15032893 0.65624085 5 12 74 0.842105263 0.726998728 0.157894737 0.2 0.368421053 15 1 2 16 X:15032880-15032919 7 be FBtr0073956 15032682 15042060 AGACTGA 7mer-A1 dme-miR-14-3p X + 15032883 15032915 3'utr be FlyBase G46375.1 AAAATAACCTTTGCAGAGACTGACCCAAATCCT 11 15032893 0.596280687 5 10 47 0.961538462 1.397940009 0 0.545454545 0.807692308 11 1 0 25 X:15032883-15032915 7 13 3251 FBgn0052594 1740.783333 62.23 95.48 0.007467902 0.208902459 0.136154168 6 6 6 0.2 dme-bantam-3p 6mer3-8 TGATCT X 15032981 15032986 + X_15032981_15032986_+ 0.999736065 0.999596647 0.999666356 9.86E-05 be FBtr0073956 15032682 15042060 X + 15032937 15032995 3'utr be FlyBase G61415.1 GAAATACCTATTGAAAAAAACATGAAATACGCTAAACGAAACTTTGATCTGTATATAAA 20 15032981 0.972342583 7 20 118 1 1.342422681 0.090909091 0.05 0.136363636 20 0 0 22 X:15032937-15032995 6 be FBtr0073956 15032682 15042060 TGATCT 6mer3-8 dme-bantam-3p X + 15032949 15032995 3'utr be FlyBase G46376.1 GAAAAAAACATGAAATACGCTAAACGAAACTTTGATCTGTATATAAA 16 15032989 0.878212254 5 16 90 1 1.414973348 0 0.375 0.615384615 16 0 0 26 X:15032949-15032995 6 13.5 3252 FBgn0052594 1740.783333 62.23 95.48 0.007755129 0.216937169 0.141390867 0 -8 -4 0.2 dme-miR-263a-5p 6mer2-7 TGCCAT X 15033706 15033711 + X_15033706_15033711_+ 0.994957579 0.991722106 0.993339843 0.002287844 be FBtr0073956 15032682 15042060 X + 15033684 15033726 5'utr be FlyBase G61417.1 AGCCGTCGACGACGGCCAATTATGCCATCCCCGTTTGGAGGTC 19 15033705 0.730773617 4 19 107 1 1.322219295 0.19047619 0.052631579 0.142857143 19 0 0 21 X:15033684-15033726 6 be FBtr0073956 15032682 15042060 TGCCAT 6mer2-7 dme-miR-263a-5p X + 15033691 15033727 5'utr be FlyBase G46378.1 GACGACGGCCAATTATGCCATCCCCGTTTGGAGGTCC 9 15033706 0.932382037 3 9 49 1 1.079181246 0.25 0.333333333 0.5 9 0 0 12 X:15033691-15033727 6 14 3253 FBgn0052594 1740.783333 62.23 95.48 0.008042356 0.224971879 0.146627566 1 0 0.5 0.2 dme-miR-283-5p 7mer-m8 TGATATT X 15041738 15041744 + X_15041738_15041744_+ 0.599918443 0.603000047 0.601459245 0.00217902 be FBtr0073957|FBtr0073956 15034089|15032682 15042060|15042060 X + 15041627 15041845 3'utr be FlyBase G61420.1 ATATATATATACCTATGAATCTGCCACAATCTGTCACACCTGCCAGCCACAAAAAAGAGTATAAGATGAGTGAATGATTAGAGAGAAACAAAAAATACCGAAAACACAATGTGATATTCTCTGGATATGCGATGAACTGAGGAGACCTACGCATATACCTAATTAGCTAGGGAGAAGCGAACTAGGAGATATAAACCATAAGCTAGATTAAGTGAATTA 581 15041743 0.948861065 38 533 2628 0.91954023 2.028028724 0.202586207 0.166953528 0.304597701 581 51 5 640 X:15041627-15041845 7 be FBtr0073957|FBtr0073956 15034089|15032682 15042060|15042060 TGATATT 7mer-m8 dme-miR-283-5p X + 15041628 15041842 3'utr be FlyBase G46381.1 TATATATATACCTATGAATCTGCCACAATCTGTCACACCTGCCAGCCACAAAAAAGAGTATAAGATGAGTGAATGATTAGAGAGAAACAAAAAATACCGAAAACACAATGTGATATTCTCTGGATATGCGATGAACTGAGGAGACCTACGCATATACCTAATTAGCTAGGGAGAAGCGAACTAGGAGATATAAACCATAAGCTAGATTAAGTGAA 367 15041743 0.955283087 36 335 1540 0.91005291 2.11058971 0.218694885 0.386920981 0.603174603 367 48 3 516 X:15041628-15041842 7 157.5 3254 FBgn0052594 1740.783333 62.23 95.48 0.09047651 2.530933633 1.649560117 -5 -5 -5 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 15051306 15051311 + X_15051306_15051311_+ 0.999980406 0.999486647 0.999733526 0.000349169 CG5541 FBtr0073959|FBtr0073958 15051108|15051108 15051842|15051842 X + 15051275 15051338 3'utr CG5541 FlyBase G61430.1 ACAGAACCACCAATGCGTGACCTTTCGCTGTACCAAAACCATAGCCTACAGTTAGTCGTAATAT 21 15051316 0.962332074 6 20 118 0.956521739 1.342422681 0.130434783 0.095238095 0.173913043 21 1 0 22 X:15051275-15051338 6 CG5541 FBtr0073959|FBtr0073958 15051108|15051108 15051842|15051842 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 15051274 15051339 3'utr CG5541 FlyBase G46391.1 TACAGAACCACCAATGCGTGACCTTTCGCTGTACCAAAACCATAGCCTACAGTTAGTCGTAATATA 19 15051304 0.964291202 8 19 99 1 1.397940009 0.2 0.263157895 0.44 19 0 0 25 X:15051274-15051339 6 15.5 3255 FBgn0030603 416.6633333 20.09 30.71333333 0.037200298 0.771528123 0.504666811 -10 2 -4 0.2 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT X 15051502 15051508 + X_15051502_15051508_+ 0.62008895 0.620198627 0.620143788 7.75E-05 CG5541 FBtr0073959|FBtr0073958 15051108|15051108 15051842|15051842 X + 15051485 15051531 3'utr CG5541 FlyBase G61432.1 AATTTAAAGCCAAAATGTGGTGCTCTTAAATGTATATGCTACATATG 42 15051501 0.845618218 7 41 330 0.960784314 1.69019608 0.176470588 0.19047619 0.333333333 42 2 0 49 X:15051485-15051531 7 CG5541 FBtr0073959|FBtr0073958 15051108|15051108 15051842|15051842 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" X + 15051485 15051522 3'utr CG5541 FlyBase G46393.1 AATTTAAAGCCAAAATGTGGTGCTCTTAAATGTATATG 11 15051501 0.78149501 4 10 73 0.941176471 1.204119983 0.235294118 0.454545455 0.647058824 11 1 0 16 X:15051485-15051522 7 26.5 3256 FBgn0030603 416.6633333 20.09 30.71333333 0.063600509 1.319064211 0.862817452 1 1 1 0.2 dme-miR-34-5p 8mer-A1 CACTGCCA X 15064479 15064486 + X_15064479_15064486_+ 0.677358369 0.678074929 0.677716649 0.000506642 CG5548 FBtr0073960|FBtr0340425|FBtr0340424 15064402|15064402|15064402 15064548|15064548|15064926 X + 15064455 15064524 3'utr CG5548 FlyBase G61434.1 AGGCGACGCTCCTGGCCGCGGATTCACTGCCACTGCCCCATGTTGCAAGCTAGTTTCCAGCGGAAATGTC 23 15064477 0.954425967 5 23 104 1 1.491361694 0.193548387 0.217391304 0.419354839 23 0 0 31 X:15064455-15064524 8 CG5548 FBtr0340424 15064402 15064926 CACTGCCA 8mer-A1 dme-miR-34-5p X + 15064462 15064502 3'utr CG5548 FlyBase G46394.1 GCTCCTGGCCGCGGATTCACTGCCACTGCCCCATGTTGCAA 8 15064477 0.960478759 3 7 34 0.909090909 1 0.181818182 0.25 0.454545455 8 1 0 10 X:15064462-15064502 8 14 3257 FBgn0030605 769.6633333 180.22 277.04 0.018189771 0.077682832 0.050534219 2 2 2 0.2 dme-miR-79-3p 8mer-A1 TAGCTTTA X 15068873 15068880 + X_15068873_15068880_+ 0.571646308 0.607392751 0.58951953 0.025276593 dob FBtr0073961 15068864 15069091 X + 15068844 15068903 stop_codon dob FlyBase G61437.1 GGGGACATCCGGTGTTCATTAGGCGCCATTAGCTTTATCAGCGATCGTCCCATCGATCGG 37 15068872 0.984102479 2 34 270 0.931818182 1.612783857 0.25 0.162162162 0.295454545 37 3 0 41 X:15068844-15068903 8 dob FBtr0073961 15068864 15069091 TAGCTTTA 8mer-A1 dme-miR-79-3p X + 15068861 15068892 stop_codon dob FlyBase G46397.1 ATTAGGCGCCATTAGCTTTATCAGCGATCGTC 14 15068872 0.85355754 3 14 97 1 1.342422681 0.181818182 0.5 0.681818182 14 0 0 22 X:15068861-15068892 8 25 3258 FBgn0030607 31.33333333 1.986666667 2.963333333 0.79787234 12.58389262 8.436445444 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 15069031 15069036 + X_15069031_15069036_+ 0.79789933 0.829944644 0.813921987 0.022659449 dob FBtr0073961|FBtr0073961|FBtr0073961 15068864|15068864|15068864 15069091|15069091|15069091 X + 15069011 15069045 3'utr dob FlyBase G61438.1 TTTTTTTTATGTACTGACTGCTGTGAACAAAATAA 28 15069030 0.699729444 5 27 166 0.966666667 1.462397998 0.033333333 0.071428571 0.133333333 28 1 0 29 X:15069011-15069045 6 dob FBtr0073961|FBtr0073961|FBtr0073961 15068864|15068864|15068864 15069091|15069091|15069091 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X + 15069019 15069048 3'utr dob FlyBase G46398.1 ATGTACTGACTGCTGTGAACAAAATAAATT 23 15069030 0.691427492 4 22 114 0.972972973 1.556302501 0 0.47826087 0.675675676 23 1 0 36 X:15069019-15069048 6 25.5 3259 FBgn0030607 31.33333333 1.986666667 2.963333333 0.813829787 12.83557047 8.605174353 1 1 1 0.2 dme-miR-980-3p 6mer2-7 GCAGCT X 15082310 15082315 + X_15082310_15082315_+ 0.993057008 0.988561284 0.990809146 0.00317894 CG33177 FBtr0073962 15082192 15082369 X + 15082267 15082326 3'utr CG33177 FlyBase G61443.1 AGGTTTTGGGTGCTCATTTTCAGTGAAACGTATGGTTAATTTAGCAGCTTTTGTCCTATA 11 15082316 0.990071182 7 11 109 1 1.079181246 0.166666667 0.090909091 0.166666667 11 0 0 12 X:15082267-15082326 6 CG33177 FBtr0073962 15082192 15082369 GCAGCT 6mer2-7 dme-miR-980-3p X + 15082245 15082334 3'utr CG33177 FlyBase G46401.1 AGCACCAGTGATGTCAAGGTACAGGTTTTGGGTGCTCATTTTCAGTGAAACGTATGGTTAATTTAGCAGCTTTTGTCCTATAAGTAGGAA 7 15082317 0.989282418 7 7 65 1 1.146128036 0.214285714 0.571428571 0.785714286 7 0 0 14 X:15082245-15082334 6 6.5 3260 FBgn0053177 17.33333333 2.496666667 3.806666667 0.375 2.603471295 1.707530648 -6 -7 -6.5 0.2 dme-miR-2a-2-5p 7mer-m1 GATGAGG X 15088282 15088288 + X_15088282_15088288_+ 0.674168692 0.648478219 0.661323455 0.018165927 CG5599 FBtr0073964 15088247 15088629 X + 15088245 15088314 stop_codon CG5599 FlyBase G61446.1 CTAGAGAGCCTATTACTCGAAAACGCTTACTTTTACGGATGAGGCTCTTTCCCATGCATTTATCTAGACA 251 15088284 0.929656086 13 245 2070 0.975945017 2.152288344 0.024054983 0.147410359 0.264604811 251 6 1 284 X:15088245-15088314 7 CG5599 FBtr0073964 15088247 15088629 GATGAGG 7mer-m1 dme-miR-2a-2-5p X + 15088259 15088316 3'utr CG5599 FlyBase G46405.1 ACTCGAAAACGCTTACTTTTACGGATGAGGCTCTTTCCCATGCATTTATCTAGACATA 163 15088284 0.911829466 11 159 1299 0.97260274 2.328379603 0.146118721 0.282208589 0.465753425 163 6 0 213 X:15088259-15088316 7 199.5 3261 FBgn0030612 84.33666667 5.47 8.336666667 2.365519149 36.47166362 23.93042783 -2 -2 -2 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA X 15088496 15088503 + X_15088496_15088503_+ 0.621704906 0.614652454 0.61817868 0.0049868 CG5599 FBtr0073964 15088247 15088629 X + 15088477 15088509 3'utr CG5599 FlyBase G61448.1 ACTTTTATCGTTGTTAACCTGCATTTATATATC 11 15088490 0.665580778 4 11 110 1 1.041392685 0.090909091 0 0 11 0 0 11 X:15088477-15088509 8 CG5599 FBtr0073964 15088247 15088629 TGCATTTA 8mer-A1 dme-miR-277-3p X + 15088485 15088508 3'utr CG5599 FlyBase G46407.1 CGTTGTTAACCTGCATTTATATAT 8 15088489 0.667608041 4 5 79 0.727272727 0.602059991 0 0.375 0.545454545 8 2 1 8 X:15088485-15088508 8 9.5 3262 FBgn0030612 84.33666667 5.47 8.336666667 0.112643769 1.736745887 1.139544182 6 7 6.5 0.2 dme-miR-317-3p 8mer-A1 TGTGTTCA X 1515756 1515763 + X_1515756_1515763_+ 0.594655308 0.571970947 0.583313127 0.016040293 inc FBtr0339591|FBtr0070260|FBtr0339590 1515389|1515389|1515389 1517615|1517615|1517137 X + 1515734 1515805 3'utr inc FlyBase G57995.1 ACGAAGTGTGTGCGGGCGTGCATGTGTTCAACTTGTAGTAAACCAGATAGACCCGACTGTACGAGCAACAAG 45 1515756 0.944432882 8 43 296 0.965517241 1.748188027 0.172413793 0.266666667 0.431034483 45 2 0 56 X:1515734-1515805 8 inc FBtr0070260|FBtr0339590|FBtr0339591 1515389|1515389|1515389 1517615|1517137|1517615 TGTGTTCA 8mer-A1 dme-miR-317-3p X + 1515734 1515794 3'utr inc FlyBase G43877.1 ACGAAGTGTGTGCGGGCGTGCATGTGTTCAACTTGTAGTAAACCAGATAGACCCGACTGTA 21 1515756 0.980218697 4 21 146 1 1.491361694 0.322580645 0.380952381 0.580645161 21 0 0 31 X:1515734-1515794 8 30 3263 FBgn0025394 956.7333333 41.24 63.02 0.0313567 0.727449079 0.476039353 0 0 0 0.2 dme-miR-1003-3p 6mer3-8 ATGTGA X 1516418 1516423 + X_1516418_1516423_+ 0.998735019 0.993831291 0.996283155 0.00346744 inc FBtr0339591|FBtr0070260|FBtr0339590 1515389|1515389|1515389 1517615|1517615|1517137 X + 1516319 1516438 3'utr inc FlyBase G57997.1 GTTTTGTGTAGGCCCGGTTTTACTACCTTGAGCTTTATTTTAGAAAACGAGCAAGGCGAAGATCAACTTTAGGAAATCAATTGAATCACGACTGAATTTATGTGAACTTGCACTCAAAGA 22 1516416 0.983555366 11 20 159 0.884615385 1.06069784 0.115384615 0.090909091 0.230769231 22 2 1 23 X:1516319-1516438 6 inc FBtr0070260|FBtr0339590|FBtr0339591 1515389|1515389|1515389 1517615|1517137|1517615 ATGTGA 6mer3-8 dme-miR-1003-3p X + 1516388 1516476 3'utr inc FlyBase G43879.1 TAGGAAATCAATTGAATCACGACTGAATTTATGTGAACTTGCACTCAAAGAAAATACATACATGCGAATACATTATAGTGAGGATATAC 21 1516400 0.974942179 12 21 129 1 1.51851394 0.121212121 0.428571429 0.636363636 21 0 0 33 X:1516388-1516476 6 11.5 3264 FBgn0025394 956.7333333 41.24 63.02 0.012020068 0.27885548 0.182481752 2 18 10 0.2 dme-miR-1012-3p 6mer3-8 TTGACT X 1516684 1516689 + X_1516684_1516689_+ 0.758479601 0.988118895 0.873299248 0.162379506 inc FBtr0339591|FBtr0070260|FBtr0339590 1515389|1515389|1515389 1517615|1517615|1517137 X + 1516624 1516728 3'utr inc FlyBase G57999.1 AGCGAAAATTGAAGATGATCCAGAACGTCGCCACCTACTCGTACCCATTTTGTATCCATTTTGACTTATTTTACGAGCACAGCTGGTGCAGATTATATAGAGTAT 14 1516683 0.983791318 9 12 95 0.9375 0.875061263 0.125 0.071428571 0.1875 14 0 1 15 X:1516624-1516728 6 inc FBtr0070260|FBtr0339590|FBtr0339591 1515389|1515389|1515389 1517615|1517137|1517615 TTGACT 6mer3-8 dme-miR-1012-3p X + 1516671 1516765 3'utr inc FlyBase G43881.1 TTTTGTATCCATTTTGACTTATTTTACGAGCACAGCTGGTGCAGATTATATAGAGTATAACTTATGCTTACGAGGATTATTTCGACGAAGAACCT 8 1516684 0.986567326 5 7 66 1 1 0.2 0.25 0.4 8 0 0 10 X:1516671-1516765 6 3.5 3265 FBgn0025394 956.7333333 41.24 63.02 0.003658282 0.084869059 0.055537924 1 0 0.5 0.2 dme-miR-283-5p 6mer3-8 TGATAT X 15317815 15317820 + X_15317815_15317820_+ 0.468281832 0.538411478 0.503346655 0.049589186 gce FBtr0310308|FBtr0303199|FBtr0303198|FBtr0331765 15317764|15317764|15317764|15317764 15319074|15319074|15319074|15319074 X + 15317750 15317841 stop_codon gce FlyBase G61467.1 GGACGACCAGGACTAGAGTGATGGAGAGCGCCCGATCGGGTCTCGACTGAAGGGTTTCATCGATGTGATATGTAACTACTGTCCTGGCAGTC 45 15317791 0.961321726 14 38 257 0.854166667 1.311753861 0.208333333 0.066666667 0.125 45 6 1 41 X:15317750-15317841 6 gce FBtr0303198|FBtr0331765|FBtr0310308|FBtr0303199 15317764|15317764|15317764|15317764 15319074|15319074|15319074|15319074 TGATAT 6mer3-8 dme-miR-283-5p X + 15317753 15317840 stop_codon gce FlyBase G46420.1 CGACCAGGACTAGAGTGATGGAGAGCGCCCGATCGGGTCTCGACTGAAGGGTTTCATCGATGTGATATGTAACTACTGTCCTGGCAGT 27 15317792 0.975468614 10 26 163 0.96969697 1.505149978 0.303030303 0.222222222 0.363636364 27 1 0 32 X:15317753-15317840 6 15 3266 FBgn0261703 2542.05 55.46 85.10666667 0.005900749 0.2704652 0.176249413 24 23 23.5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 15319063 15319068 + X_15319063_15319068_+ 0.644288635 0.818354201 0.731321418 0.123082966 gce FBtr0310308|FBtr0303199|FBtr0303198|FBtr0331765 15317764|15317764|15317764|15317764 15319074|15319074|15319074|15319074 X + 15319040 15319080 3'utr gce FlyBase G61476.1 AATGTATTAGTGAATAAACTTGTGTACCTACATACAAAACA 42 15319062 0.73288839 4 41 324 0.956521739 1.643452676 0 0.095238095 0.173913043 42 2 0 44 X:15319040-15319080 6 gce FBtr0303198|FBtr0331765|FBtr0310308|FBtr0303199 15317764|15317764|15317764|15317764 15319074|15319074|15319074|15319074 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X + 15319043 15319079 3'utr gce FlyBase G46428.1 GTATTAGTGAATAAACTTGTGTACCTACATACAAAAC 32 15319062 0.707466968 4 31 236 0.960784314 1.213074825 0 0.5 0.68627451 32 0 2 49 X:15319043-15319079 6 37 3267 FBgn0261703 2542.05 55.46 85.10666667 0.014555182 0.667147494 0.434748551 1 1 1 0.2 dme-miR-970-3p 7mer-A1 CTTATGA X 15327101 15327107 + X_15327101_15327107_+ 0.756419181 0.545118351 0.650768766 0.149412229 Top1 FBtr0100294|FBtr0340434 15325917|15325917 15328029|15328029 X + 15327063 15327124 3'utr Top1 FlyBase G61499.1 TGGATGGATCTCGATGTGGTTTCGCTTTGATTTCGTACCTTATGATCATTTTAGTTAACATT 15 15327105 0.881818272 6 15 165 1 1.230448921 0 0.133333333 0.235294118 15 0 0 17 X:15327063-15327124 7 Top1 FBtr0100294|FBtr0340434 15325917|15325917 15328029|15328029 CTTATGA 7mer-A1 dme-miR-970-3p X + 15327051 15327124 3'utr Top1 FlyBase G46446.1 ACAAAGCCACATTGGATGGATCTCGATGTGGTTTCGCTTTGATTTCGTACCTTATGATCATTTTAGTTAACATT 14 15327105 0.964706856 6 14 143 1 1.397940009 0 0.357142857 0.64 14 0 0 25 X:15327051-15327124 7 10.5 3268 FBgn0004924 1711.443333 50.77666667 78.29333333 0.006135172 0.206787895 0.134111035 -4 -4 -4 0.2 dme-miR-1003-3p 6mer3-8 ATGTGA X 15327701 15327706 + X_15327701_15327706_+ 0.565908276 0.535068455 0.550488365 0.021807032 Top1 FBtr0100294|FBtr0340434 15325917|15325917 15328029|15328029 X + 15327675 15327756 3'utr Top1 FlyBase G61503.1 ACATATTATAATTAGTGATTGATATAATGTGAACGCAAACATCTGTGTGCGTTTGTCGTGGATTCGCATACGGAAGCGGGAG 11 15327696 0.978648405 7 11 80 1 1.079181246 0.25 0.090909091 0.166666667 11 0 0 12 X:15327675-15327756 6 Top1 FBtr0100294|FBtr0340434 15325917|15325917 15328029|15328029 ATGTGA 6mer3-8 dme-miR-1003-3p X + 15327666 15327712 3'utr Top1 FlyBase G46448.1 CGCCCAAACACATATTATAATTAGTGATTGATATAATGTGAACGCAA 7 15327694 0.979946123 3 7 51 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 X:15327666-15327712 6 4.5 3269 FBgn0004924 1711.443333 50.77666667 78.29333333 0.00262936 0.088623383 0.057476158 5 7 6 0.2 dme-bantam-3p 6mer3-8 TGATCT X 15340206 15340211 + X_15340206_15340211_+ 0.761196445 0.506570193 0.633883319 0.180047913 HDAC6 FBtr0074008|FBtr0301774|FBtr0330405|FBtr0074010|FBtr0307383|FBtr0074009 15340014|15339631|15340167|15340014|15340014|15340014 15340360|15340360|15340360|15340360|15340360|15340360 X + 15340181 15340242 3'utr HDAC6 FlyBase G61519.1 CAATCCTCTAGCCCGCACCCACAACTGATCTGAAAACTGCTGCAACTGGCAGCCGGTCGGTC 18 15340206 0.939116067 3 15 74 0.842105263 0.903089987 0.157894737 0.055555556 0.105263158 18 2 1 16 X:15340181-15340242 6 HDAC6 FBtr0074009|FBtr0307383|FBtr0074010|FBtr0330405|FBtr0301774|FBtr0074008 15340014|15340014|15340014|15340167|15339631|15340014 15340360|15340360|15340360|15340360|15340360|15340360 TGATCT 6mer3-8 dme-bantam-3p X + 15340189 15340230 3'utr HDAC6 FlyBase G46454.1 TAGCCCGCACCCACAACTGATCTGAAAACTGCTGCAACTGGC 6 15340206 0.930712466 2 4 15 0.909090909 0.698970004 0 0.333333333 0.636363636 6 0 1 10 X:15340189-15340230 6 10 3270 FBgn0026428 186.77 5.076666667 7.796666667 0.053541789 1.969796454 1.282599401 0 0 0 0.2 dme-bantam-3p 6mer3-8 TGATCT X 15340314 15340319 + X_15340314_15340319_+ 0.67292838 0.836193539 0.754560959 0.115445859 HDAC6 FBtr0074008|FBtr0301774|FBtr0330405|FBtr0074010|FBtr0307383|FBtr0074009 15340014|15339631|15340167|15340014|15340014|15340014 15340360|15340360|15340360|15340360|15340360|15340360 X + 15340268 15340331 3'utr HDAC6 FlyBase G61520.1 CACCATACCATTTATACAAATGCAAATTGTTAAAGTTATCAACTAATGATCTAATAAATAATTC 16 15340314 0.987328366 4 14 124 0.894736842 0.753327667 0 0.125 0.263157895 16 0 2 17 X:15340268-15340331 6 HDAC6 FBtr0074009|FBtr0307383|FBtr0074010|FBtr0330405|FBtr0301774|FBtr0074008 15340014|15340014|15340014|15340167|15339631|15340014 15340360|15340360|15340360|15340360|15340360|15340360 TGATCT 6mer3-8 dme-bantam-3p X + 15340295 15340326 3'utr HDAC6 FlyBase G46455.1 TGTTAAAGTTATCAACTAATGATCTAATAAAT 5 15340314 0.786498605 2 5 37 1 0.954242509 0 0.4 0.666666667 5 0 0 9 X:15340295-15340326 6 9.5 3271 FBgn0026428 186.77 5.076666667 7.796666667 0.0508647 1.871306632 1.218469431 0 0 0 0.2 dme-bantam-3p 7mer-A1 GATCTCA X 15381124 15381130 - X_15381124_15381130_- 0.790949887 0.82216567 0.806557779 0.022072904 CG9164 FBtr0074014|FBtr0074012|FBtr0343351 15380637|15380369|15380637 15381343|15381343|15381343 X - 15381107 15381147 3'utr CG9164 FlyBase G67543.1 CGACTCGTAGGACCATAGATCTCACTGGGGGTCAGCAAACA 14 15381132 0.895301659 2 13 56 0.941176471 1.204119983 0.235294118 0.142857143 0.294117647 14 1 0 16 X:15381107-15381147 7 CG9164 FBtr0074012|FBtr0343351|FBtr0074014 15380369|15380637|15380637 15381343|15381343|15381343 GATCTCA 7mer-A1 dme-bantam-3p X - 15381107 15381153 3'utr CG9164 FlyBase G50838.1 TCATCACGACTCGTAGGACCATAGATCTCACTGGGGGTCAGCAAACA 18 15381132 0.818915307 2 18 82 1 1.431363764 0.37037037 0.444444444 0.62962963 18 0 0 27 X:15381107-15381153 7 16 3272 FBgn0030634 21.68 1.186666667 1.78 0.73800738 13.48314607 8.988764045 2 2 2 0.2 dme-miR-986-5p 8mer-A1 ATTCGAGA X 15447953 15447960 - X_15447953_15447960_- 0.573673682 0.590567671 0.582120677 0.011945862 Scamp FBtr0332592 15446177 15449232 X - 15447935 15448020 5'utr Scamp FlyBase G67560.1 CACCATGACGTTGTTGGCCAACGTGATAGGCGGTCTAATTTTGCTGTTCCACGCTGGCGAATTCGAGACCTTCTTCCTGGCCATCT 16 15447980 0.913899054 8 16 116 1 1.278753601 0.052631579 0.1875 0.315789474 16 0 0 19 X:15447935-15448020 8 Scamp FBtr0332592 15446177 15449232 ATTCGAGA 8mer-A1 dme-miR-986-5p X - 15447911 15447995 5'utr Scamp FlyBase G50852.1 ATAGGCGGTCTAATTTTGCTGTTCCACGCTGGCGAATTCGAGACCTTCTTCCTGGCCATCTTCTACACGATGCTCTTCTCGCCCG 11 15447966 0.983772138 6 10 83 1 1.278753601 0.105263158 0.545454545 0.736842105 11 0 0 19 X:15447911-15447995 8 5 3273 FBgn0040285 2407.336667 124.0333333 190.8666667 0.002076984 0.040311744 0.026196298 20 6 13 0.2 dme-miR-986-5p 6mer3-8 ATTCGA X 15464923 15464928 + X_15464923_15464928_+ 0.981149611 0.895463053 0.938306332 0.060589505 CG6294 FBtr0308830 15464407 15465027 X + 15464888 15464945 5'utr CG6294 FlyBase G61549.1 TTTATTTATTGATAAGCCTTATCGCTGTTACTATGATTCGAAAATGCGTGATAGTTAA 11 15464932 0.9840066 5 10 80 0.928571429 1.113943352 0.071428571 0.272727273 0.428571429 11 1 0 13 X:15464888-15464945 6 CG6294 FBtr0308830 15464407 15465027 ATTCGA 6mer3-8 dme-miR-986-5p X + 15464905 15464945 5'utr CG6294 FlyBase G46481.1 CTTATCGCTGTTACTATGATTCGAAAATGCGTGATAGTTAA 5 15464932 0.979812771 3 5 35 1 0.903089987 0.125 0.6 0.75 5 0 0 8 X:15464905-15464945 6 7.5 3274 FBgn0030640 37.48 1.823333333 2.763333333 0.200106724 4.113345521 2.71411339 -9 -9 -9 0.2 dme-miR-307a-3p 6mer2-7 GTTGTG X 15579482 15579487 + X_15579482_15579487_+ 0.985688448 0.980388931 0.983038689 0.003747312 CG7872 FBtr0074046 15579434 15579857 X + 15579424 15579549 stop_codon CG7872 FlyBase G61572.1 TTTGAGGATTAGCCGCTGCTCTGCGATGTTCAAGTTTCATTGTTCCATCTAAAAGTCTGTTGTGTGCGTGTTGTAAAACCGATCCCAAATTCCTCGCCCTCGGCATCCCCATACCGTCTAAATTTT 75 15579483 0.987354063 14 69 602 0.929411765 1.596597096 0.294117647 0.133333333 0.235294118 75 5 1 79 X:15579424-15579549 6 CG7872 FBtr0074046 15579434 15579857 GTTGTG 6mer2-7 dme-miR-307a-3p X + 15579461 15579550 3'utr CG7872 FlyBase G46500.1 CATTGTTCCATCTAAAAGTCTGTTGTGTGCGTGTTGTAAAACCGATCCCAAATTCCTCGCCCTCGGCATCCCCATACCGTCTAAATTTTG 50 15579483 0.919210266 12 44 381 0.907894737 1.236789099 0.315789474 0.34 0.565789474 50 4 3 69 X:15579461-15579550 6 38.5 3275 FBgn0030658 603.0033333 44.82333333 68.86333333 0.063847077 0.858927642 0.559078368 -1 -1 -1 0.2 dme-bantam-3p 6mer3-8 TGATCT X 15585131 15585136 + X_15585131_15585136_+ 0.968517739 0.864256155 0.916386947 0.073724014 CG8097 FBtr0340344 15584989 15585249 X + 15585032 15585218 3'utr CG8097 FlyBase G61584.1 AAAAAACACAAAAACAAGAGGCTAATGCGAAACCATAGCAAAACTAAATGCTGGCTCAACAGTGGGCGGTAATAATATATGTAATAATATAATGACATGTGATCTTAAAAGGGCCATACAATATTGATATAACATAGTTACACCTCTCATTTTATCGATAATAATCAAAATATAGCAGTATCTACTT 122 15585131 0.965562643 23 120 637 0.986206897 2.155336037 0.131034483 0.147540984 0.282758621 122 2 0 143 X:15585032-15585218 6 CG8097 FBtr0340344 15584989 15585249 TGATCT 6mer3-8 dme-bantam-3p X + 15585026 15585179 3'utr CG8097 FlyBase G46509.1 AAAAAAAAAAAACACAAAAACAAGAGGCTAATGCGAAACCATAGCAAAACTAAATGCTGGCTCAACAGTGGGCGGTAATAATATATGTAATAATATAATGACATGTGATCTTAAAAGGGCCATACAATATTGATATAACATAGTTACACCTCTC 99 15585131 0.961362524 14 94 473 0.97260274 1.851258349 0.164383562 0.363636364 0.568493151 99 3 1 142 X:15585026-15585179 6 67 3276 FBgn0030660 130.6666667 8.276666667 12.6 0.512755102 8.095046315 5.317460317 0 0 0 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 15585646 15585651 - X_15585646_15585651_- 0.999882094 0.941977257 0.970929675 0.040944877 CG9220 FBtr0074064|FBtr0340347 15585287|15585287 15585993|15585993 X - 15585640 15585679 3'utr CG9220 FlyBase G67613.1 GGAACATTTATGGCGATTAAATGTAGTTACCAAAAATCAT 6 15585653 0.963419072 3 6 33 1 0.954242509 0.555555556 0.333333333 0.555555556 6 0 0 9 X:15585640-15585679 6 CG9220 FBtr0074064|FBtr0340347 15585287|15585287 15585993|15585993 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X - 15585598 15585716 3'utr CG9220 FlyBase G50883.1 ATGCTAAAAACAAATGAAATGTAAATAAGAGTAAAACGGAACATTTATGGCGATTAAATGTAGTTACCAAAAATCATTATTATGTATCTAATGATACATTGTTTTCTAACCAAAGTCGC 11 15585652 0.98168989 6 10 74 1 1.146128036 0.285714286 0.272727273 0.428571429 11 0 0 14 X:15585598-15585716 6 4 3277 FBgn0030662 132.6 4.106666667 6.293333333 0.030165913 0.974025974 0.63559322 2 1 1.5 0.2 dme-bantam-3p 7mer-m8 TGATCTC X 15702113 15702119 - X_15702113_15702119_- 0.64793475 0.661429893 0.654682321 0.009542547 Pis FBtr0074059 15701449 15703028 X - 15702053 15702137 3'utr Pis FlyBase G67632.1 TTGCCGTGCTCAAGGCCCTGATCTCGGTGATGCACGCCTACGTGGCGGGCATCGATCTGGCGGCCGTGGATGTACGCGAGCGGCA 46 15702110 0.970930719 7 42 238 0.918367347 1.051152522 0.244897959 0.043478261 0.102040816 46 1 3 45 X:15702053-15702137 7 Pis FBtr0074059 15701449 15703028 TGATCTC 7mer-m8 dme-bantam-3p X - 15702054 15702137 3'utr Pis FlyBase G50898.1 TTGCCGTGCTCAAGGCCCTGATCTCGGTGATGCACGCCTACGTGGCGGGCATCGATCTGGCGGCCGTGGATGTACGCGAGCGGC 20 15702110 0.967150286 6 18 98 0.9 1.431363764 0.166666667 0.4 0.6 20 3 0 27 X:15702054-15702137 7 29 3278 FBgn0030670 380.6666667 33.08333333 50.32333333 0.076182137 0.876574307 0.576273432 -9 -9 -9 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 15702290 15702295 - X_15702290_15702295_- 0.898028535 0.582455128 0.740241831 0.223144091 Pis FBtr0074059 15701449 15703028 X - 15702264 15702367 5'utr Pis FlyBase G67633.1 AATGCGATTGTATTACCAGAAGGACATACTCACATTCATGTGCTGCGTCAATGAGCTGTTTTACGTGTGCTTGTACCTCTTGCATTTCACCTACGGCCCGCTGA 43 15702288 0.837620263 10 38 362 0.905660377 1.204119983 0.301886792 0.186046512 0.339622642 43 3 2 48 X:15702264-15702367 6 Pis FBtr0074059 15701449 15703028 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X - 15702265 15702327 5'utr Pis FlyBase G50899.1 TGCTGCGTCAATGAGCTGTTTTACGTGTGCTTGTACCTCTTGCATTTCACCTACGGCCCGCTG 14 15702288 0.985631989 5 14 116 1 1.230448921 0.235294118 0.214285714 0.352941176 14 0 0 17 X:15702265-15702327 6 22 3279 FBgn0030670 380.6666667 33.08333333 50.32333333 0.057793345 0.664987406 0.437172948 -7 -7 -7 0.2 dme-miR-34-5p 6mer2-7 ACTGCC X 15706216 15706221 - X_15706216_15706221_- 0.980535147 0.970068528 0.975301837 0.007401004 CG9281 FBtr0074056|FBtr0074057 15705804|15705804 15706932|15706932 X - 15706195 15706257 3'utr CG9281 FlyBase G67636.1 AGTAGTCGCAGCAAATTGTGTGAGAAACGATGTTAAACTGCCCTCCCAAATCGGAACCGTGAT 133 15706219 0.872496801 9 126 624 0.987421384 1.894869657 0.616352201 0.172932331 0.308176101 133 1 1 157 X:15706195-15706257 6 CG9281 FBtr0074057|FBtr0074056 15705804|15705804 15706932|15706932 ACTGCC 6mer2-7 dme-miR-34-5p X - 15706149 15706257 3'utr CG9281 FlyBase G50902.1 AGTAGTCGCAGCAAATTGTGTGAGAAACGATGTTAAACTGCCCTCCCAAATCGGAACCGTGATTTAGTTGCTCGCGGATTCGAACAAGACAATTAAATATTCTTCGATT 84 15706219 0.965607003 7 79 423 0.96 1.602059991 0.664 0.357142857 0.568 84 3 2 120 X:15706149-15706257 6 96.5 3280 FBgn0030672 2569.26 100.7833333 155.7866667 0.037559453 0.957499587 0.619436837 -2 -2 -2 0.2 dme-miR-318-3p 6mer2-7 CCAGTG X 15706914 15706919 - X_15706914_15706919_- 0.999502403 0.91424183 0.956872116 0.060288348 CG9281 FBtr0074056|FBtr0074057|FBtr0340308 15705804|15705804|15706444 15706932|15706932|15706932 X - 15706881 15706929 3'utr CG9281 FlyBase G67641.1 TATCCCATATCCAGTGGATAGATAGCTGCCAACGGCCACACACTCGCAC 11 15706916 0.951827528 4 10 44 1 1.146128036 0 0.272727273 0.428571429 11 0 0 14 X:15706881-15706929 6 CG9281 FBtr0074057|FBtr0340308|FBtr0074056 15705804|15706444|15705804 15706932|15706932|15706932 CCAGTG 6mer2-7 dme-miR-318-3p X - 15706893 15706929 3'utr CG9281 FlyBase G50907.1 TATCCCATATCCAGTGGATAGATAGCTGCCAACGGCC 7 15706915 0.968875269 3 6 31 1 1.113943352 0 0.571428571 0.769230769 7 0 0 13 X:15706893-15706929 6 8 3281 FBgn0030672 2569.26 100.7833333 155.7866667 0.003113737 0.079378204 0.051352277 -3 -4 -3.5 0.2 dme-miR-8-3p 6mer3-8 CAGTAT X 15712115 15712120 + X_15712115_15712120_+ 0.962026238 0.990908859 0.976467549 0.020423153 CG15601 FBtr0074055|FBtr0339684|FBtr0339685|FBtr0339683 15712008|15712008|15712008|15712008 15712186|15712186|15712309|15712186 X + 15712083 15712137 3'utr CG15601 FlyBase G61595.1 TCCAGGGGATATTTATCAACCCGTTTGCCATTCAGTATATGTAGTCAAGCTAGTT 23 15712113 0.99188917 4 18 197 0.75 1.322219295 0.357142857 0.217391304 0.357142857 23 7 0 21 X:15712083-15712137 6 CG15601 FBtr0339683|FBtr0339685|FBtr0339684|FBtr0074055 15712008|15712008|15712008|15712008 15712186|15712309|15712186|15712186 CAGTAT 6mer3-8 dme-miR-8-3p X + 15712089 15712137 3'utr CG15601 FlyBase G46517.1 GGATATTTATCAACCCGTTTGCCATTCAGTATATGTAGTCAAGCTAGTT 16 15712113 0.988872975 4 14 135 0.884615385 1.361727836 0.346153846 0.375 0.615384615 16 3 0 23 X:15712089-15712137 6 16.5 3282 FBgn0030673 63.26333333 6.943333333 10.57666667 0.260814585 2.376380221 1.560037819 2 2 2 0.2 dme-miR-184-3p 7mer-A1 CCGTCCA X 15733336 15733342 + X_15733336_15733342_+ 0.815073951 0.812567606 0.813820778 0.001772292 CG8191 FBtr0074083 15733227 15733663 X + 15733293 15733365 3'utr CG8191 FlyBase G61667.1 CTTCTCGCCCTTCTCGGCCAGGATCTCCTCGATGTTGCGCTTGCCGTCCAGATCTGTGAACCAGTTCAGATTG 65 15733334 0.825457773 8 62 461 0.963855422 1.903089987 0.084337349 0.153846154 0.337349398 65 3 0 80 X:15733293-15733365 7 CG8191 FBtr0074083 15733227 15733663 CCGTCCA 7mer-A1 dme-miR-184-3p X + 15733293 15733361 3'utr CG8191 FlyBase G46564.1 CTTCTCGCCCTTCTCGGCCAGGATCTCCTCGATGTTGCGCTTGCCGTCCAGATCTGTGAACCAGTTCAG 37 15733334 0.974929206 5 34 264 0.905660377 1.079181246 0.188679245 0.351351351 0.547169811 37 2 3 48 X:15733293-15733361 7 47.5 3283 FBgn0030675 21.07666667 1.743333333 2.686666667 2.253677052 27.24665392 17.67990074 2 2 2 0.2 dme-miR-307a-3p 6mer2-7 GTTGTG X 15735658 15735663 + X_15735658_15735663_+ 0.789689184 0.801322286 0.795505735 0.008225844 l(1)G0136 FBtr0074084|FBtr0332613 15735491|15735491 15735780|15735780 X + 15735647 15735758 3'utr l(1)G0136 FlyBase G61671.1 CTAAATATTAAGTTGTGTTCTATAGTTAAATTTTAGTTGTAGCGCTAGGTAAGTGACGCACCCGCTTCCTTGCCGCAGGCTGGCAGTTTGTCCTCTTTAGCCCTAGTTCAAT 17 15735659 0.991393947 9 17 186 1 1.255272505 0.055555556 0.058823529 0.111111111 17 0 0 18 X:15735647-15735758 6 l(1)G0136 FBtr0332613|FBtr0074084 15735491|15735491 15735780|15735780 GTTGTG 6mer2-7 dme-miR-307a-3p X + 15735649 15735701 3'utr l(1)G0136 FlyBase G46567.1 AAATATTAAGTTGTGTTCTATAGTTAAATTTTAGTTGTAGCGCTAGGTAAGTG 11 15735659 0.993122932 7 10 115 0.842105263 1.204119983 0.105263158 0.454545455 0.684210526 11 3 0 16 X:15735649-15735701 6 8.5 3284 FBgn0026666 97.33333333 15.83666667 24.21333333 0.087328767 0.53672911 0.351046256 -1 -1 -1 0.2 dme-miR-304-5p 7mer-m8 TGAGATT X 15741420 15741426 - X_15741420_15741426_- 0.619672399 0.620118937 0.619895668 0.000315723 CG8944 FBtr0074201 15741341 15743214 X - 15741403 15741453 3'utr CG8944 FlyBase G67665.1 AATTTTATTTATCTTAGTAATACCGAATGAGATTTTAGTACCATACAATAT 50 15741426 0.877165987 4 49 390 0.983050847 1.763427994 0.169491525 0.14 0.271186441 50 1 0 58 X:15741403-15741453 7 CG8944 FBtr0074201 15741341 15743214 TGAGATT 7mer-m8 dme-miR-304-5p X - 15741407 15741447 3'utr CG8944 FlyBase G50924.1 ATTTATCTTAGTAATACCGAATGAGATTTTAGTACCATACA 23 15741426 0.853096921 4 22 173 1 1.62324929 0.023809524 0.608695652 0.785714286 23 0 0 42 X:15741407-15741447 7 35.5 3285 FBgn0030680 574.6266667 15.99666667 24.55666667 0.061779242 2.219212336 1.445635944 0 0 0 0.2 dme-miR-305-3p 6mer3-8 ATGTGC X 15742210 15742215 - X_15742210_15742215_- 0.85375996 0.973853261 0.913806611 0.084918787 CG8944 FBtr0074201 15741341 15743214 X - 15742184 15742217 3'utr CG8944 FlyBase G67670.1 TAATGTGCAGGACGTTGCGTGGCCATTGACGCAT 9 15742214 0.912502726 2 9 53 1 1 0 0.111111111 0.2 9 0 0 10 X:15742184-15742217 6 CG8944 FBtr0074201 15741341 15743214 ATGTGC 6mer3-8 dme-miR-305-3p X - 15742182 15742218 3'utr CG8944 FlyBase G50929.1 ATAATGTGCAGGACGTTGCGTGGCCATTGACGCATTG 8 15742212 0.854036745 4 8 57 1 1.176091259 0 0.625 0.8 8 0 0 15 X:15742182-15742218 6 8.5 3286 FBgn0030680 574.6266667 15.99666667 24.55666667 0.014792213 0.5313607 0.346138184 -1 -3 -2 0.2 dme-miR-184-3p 6mer2-7 CCGTCC X 15742467 15742472 - X_15742467_15742472_- 0.999817047 0.999020445 0.999418746 0.000563281 CG8944 FBtr0074201 15741341 15743214 X - 15742396 15742538 3'utr CG8944 FlyBase G67672.1 TCTTCTCTCCAGACACACACAGCATTACAATCTGATTATTGATGTAAGAATTGTATACATTCCTTCCCGTCCCGCGATAATCGATGTGAGCGAGTAGATGCATTCCAGAACTAAGTATTTCATAAAGTATTCTATGTACTAAC 57 15742476 0.977225945 12 56 368 0.985714286 1.838849091 0.085714286 0.210526316 0.357142857 57 1 0 69 X:15742396-15742538 6 CG8944 FBtr0074201 15741341 15743214 CCGTCC 6mer2-7 dme-miR-184-3p X - 15742392 15742520 3'utr CG8944 FlyBase G50931.1 ACAGCATTACAATCTGATTATTGATGTAAGAATTGTATACATTCCTTCCCGTCCCGCGATAATCGATGTGAGCGAGTAGATGCATTCCAGAACTAAGTATTTCATAAAGTATTCTATGTACTAACTATA 46 15742475 0.977517176 12 42 283 0.940298507 1.498310554 0.28358209 0.260869565 0.492537313 46 3 1 63 X:15742392-15742520 6 37 3287 FBgn0030680 574.6266667 15.99666667 24.55666667 0.064389633 2.312981871 1.506719153 4 3 3.5 0.2 dme-miR-33-5p 7mer-A1 AATGCAA X 15742708 15742714 - X_15742708_15742714_- 0.742304073 0.778653535 0.760478804 0.025702907 CG8944 FBtr0074201 15741341 15743214 X - 15742669 15742780 3'utr CG8944 FlyBase G67673.1 TCTATTCGAATCCACTTACCTGTAGACGTACTTAAACACAAAAAGTATTTAACAACAACGCCCATGAATGCAACTTTAGTTCTAAGAAATTGGTAGAACACTTACACTTCCT 138 15742716 0.961568986 15 124 764 0.896969697 1.392110465 0.066666667 0.173913043 0.309090909 138 12 5 148 X:15742669-15742780 7 CG8944 FBtr0074201 15741341 15743214 AATGCAA 7mer-A1 dme-miR-33-5p X - 15742661 15742737 3'utr CG8944 FlyBase G50932.1 AGTATTTAACAACAACGCCCATGAATGCAACTTTAGTTCTAAGAAATTGGTAGAACACTTACACTTCCTTTGACTTC 50 15742716 0.97091796 7 45 263 0.9 1.799340549 0 0.34 0.528571429 50 7 0 63 X:15742661-15742737 7 69.5 3288 FBgn0030680 574.6266667 15.99666667 24.55666667 0.120948094 4.344655136 2.830188679 2 2 2 0.2 dme-miR-79-3p 7mer-m8 TAGCTTT X 15743029 15743035 - X_15743029_15743035_- 0.573131045 0.438796861 0.505963953 0.094988553 CG8944 FBtr0074201 15741341 15743214 X - 15742979 15743101 3'utr CG8944 FlyBase G67675.1 ACTAAAATTGAAACTGTAACTGCAACTGTAACATCTTTAAATTGCCAGCTACTTAGGCAACTTAGTTAGCTTTCTTAATCTTAGTTTTAGATTCACTCGATGTTCAGATCTATTTTGCAATTT 38 15743036 0.98396837 16 38 331 1 1.681241237 0.145833333 0.236842105 0.395833333 38 0 0 48 X:15742979-15743101 7 CG8944 FBtr0074201 15741341 15743214 TAGCTTT 7mer-m8 dme-miR-79-3p X - 15743014 15743103 3'utr CG8944 FlyBase G50936.2 TAACTAAAATTGAAACTGTAACTGCAACTGTAACATCTTTAAATTGCCAGCTACTTAGGCAACTTAGTTAGCTTTCTTAATCTTAGTTTT 26 15743036 0.986012817 7 23 201 0.955555556 1.633468456 0.088888889 0.423076923 0.666666667 26 2 0 43 X:15743014-15743103 7 15.5 3289 FBgn0030680 574.6266667 15.99666667 24.55666667 0.026974035 0.968951865 0.631193159 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 15751631 15751637 + X_15751631_15751637_+ 0.590755364 0.552511833 0.571633599 0.027042309 CG8239 FBtr0346188|FBtr0346188|FBtr0346188 15750934|15750934|15750934 15751737|15751737|15751737 X + 15751612 15751654 3'utr CG8239 FlyBase G61696.1 TTTAGGTTTGCGACCAACTTGTGATAAAAAAAAACCGCCCAAA 17 15751630 0.967457038 3 16 89 0.95 0.977723605 0.1 0.176470588 0.3 17 0 1 19 X:15751612-15751654 7 CG8239 FBtr0346188|FBtr0346188|FBtr0346188 15750934|15750934|15750934 15751737|15751737|15751737 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X + 15751612 15751651 3'utr CG8239 FlyBase G46588.1 TTTAGGTTTGCGACCAACTTGTGATAAAAAAAAACCGCCC 13 15751630 0.977635094 3 11 76 0.913043478 1.021189299 0 0.384615385 0.652173913 13 1 1 21 X:15751612-15751651 7 15 3290 FBgn0030683 250.2766667 19.80666667 30.47 0.059933673 0.757320767 0.492287496 1 1 1 0.2 dme-miR-252-5p 7mer-m8 GTACTTA X 15751984 15751990 - X_15751984_15751990_- 0.544919491 0.495695113 0.520307302 0.034806907 Graf FBtr0074198|FBtr0340306|FBtr0074194|FBtr0345133|FBtr0340305|FBtr0340307|FBtr0074197 15751672|15751672|15751672|15751672|15751672|15751672|15751672 15752232|15752232|15752232|15752232|15752232|15752232|15752232 X - 15751922 15752019 3'utr Graf FlyBase G67686.2 TAACCTTTATAATACCATGACCATACAATGTACTTATTTTTAATTATTTAATAAGGAGTATAAACTCAGTGCAACTGCAAAGATTTATTTACTAATTG 49 15751991 0.953992865 9 46 455 0.983333333 1.770852012 0.116666667 0.224489796 0.366666667 49 1 0 59 X:15751922-15752019 7 Graf FBtr0340305|FBtr0340307|FBtr0074197|FBtr0074198|FBtr0340306|FBtr0074194|FBtr0345133 15751672|15751672|15751672|15751672|15751672|15751672|15751672 15752232|15752232|15752232|15752232|15752232|15752232|15752232 GTACTTA 7mer-m8 dme-miR-252-5p X - 15751924 15752015 3'utr Graf FlyBase G50941.3 CTTTATAATACCATGACCATACAATGTACTTATTTTTAATTATTTAATAAGGAGTATAAACTCAGTGCAACTGCAAAGATTTATTTACTAAT 31 15751991 0.871099308 7 26 269 0.86 1.156347201 0 0.451612903 0.66 31 5 2 43 X:15751924-15752015 7 27 3291 FBgn0030685 2113.673333 59.81666667 91.46666667 0.01277397 0.451379214 0.295189504 1 1 1 0.2 dme-miR-308-3p 7mer-m1 TGTGATT X 15793951 15793957 - X_15793951_15793957_- 0.521217108 0.519522819 0.520369963 0.001198051 CG8974 FBtr0074186|FBtr0074187|FBtr0074189|FBtr0074185|FBtr0074188 15793719|15793719|15793719|15793719|15793719 15794100|15794100|15794100|15794100|15794100 X - 15793916 15793976 3'utr CG8974 FlyBase G67727.1 GTTGGGCAATAGTCGTTGGTGTGATTAATTAACATAAATTGTTAGCATTCGGTTATAATTG 24 15793950 0.990269412 8 22 223 0.896551724 1.414973348 0.344827586 0.208333333 0.344827586 24 3 0 26 X:15793916-15793976 7 CG8974 FBtr0074185|FBtr0074188|FBtr0074187|FBtr0074189|FBtr0074186 15793719|15793719|15793719|15793719|15793719 15794100|15794100|15794100|15794100|15794100 TGTGATT 7mer-m1 dme-miR-308-3p X - 15793916 15793986 3'utr CG8974 FlyBase G50962.1 TCTTAAACTCGTTGGGCAATAGTCGTTGGTGTGATTAATTAACATAAATTGTTAGCATTCGGTTATAATTG 23 15793950 0.9882527 6 22 199 1 1.51851394 0.272727273 0.260869565 0.484848485 23 0 0 33 X:15793916-15793986 7 19 3292 FBgn0030693 519 47.39666667 72.25333333 0.036608863 0.400872073 0.262963646 -7 -7 -7 0.2 dme-miR-308-3p 7mer-m1 TGTGATT X 15797138 15797144 - X_15797138_15797144_- 0.519161627 0.504921111 0.512041369 0.010069554 CG32581 FBtr0113439|FBtr0074184 15796906|15796906 15797252|15797252 X - 15797103 15797155 3'utr CG32581 FlyBase G67735.1 ATAGTCGTTGGTGTGATTAATTAACATAAATTGTTAGCATTCGGTTATAATTG 8 15797137 0.986915946 5 8 75 1 1 0.2 0.25 0.4 8 0 0 10 X:15797103-15797155 7 CG32581 FBtr0074184|FBtr0113439 15796906|15796906 15797252|15797252 TGTGATT 7mer-m1 dme-miR-308-3p X - 15797123 15797154 3'utr CG32581 FlyBase G50969.1 TAGTCGTTGGTGTGATTAATTAACATAAATTG 9 15797136 0.74042703 3 9 75 1 1.113943352 0.076923077 0.222222222 0.461538462 9 0 0 13 X:15797123-15797154 7 8 3293 FBgn0052581 0 0 0 Inf Inf Inf -7 -8 -7.5 0.2 dme-miR-932-5p 6mer2-7 GAATTG X 15824574 15824579 + X_15824574_15824579_+ 0.805294055 0.812791104 0.809042579 0.00530118 sd FBtr0112826|FBtr0074101|FBtr0308134|FBtr0310311|FBtr0074100|FBtr0346799|FBtr0308133|FBtr0308130|FBtr0308129|FBtr0112824|FBtr0112825|FBtr0112827|FBtr0074099|FBtr0308128|FBtr0340115|FBtr0310312|FBtr0310313|FBtr0308131|FBtr0308132|FBtr0301543|FBtr0301544 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15825722|15825722|15825722|15825722|15825722|15827682|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825495|15825495|15827681|15826608|15825722|15825722 X + 15824551 15824605 3'utr sd FlyBase G61750.1 AATAGTATCATCAATACGGCTAAGAATTGCGATAATAAGACGAGTAATGAAATTG 19 15824577 0.802784441 4 12 93 0.681818182 0.698970004 0.136363636 0.105263158 0.227272727 19 5 2 15 X:15824551-15824605 6 sd FBtr0346799|FBtr0310313|FBtr0301543|FBtr0308130|FBtr0308132|FBtr0074101|FBtr0308129|FBtr0112824|FBtr0310311|FBtr0074099|FBtr0308128|FBtr0308131|FBtr0074100|FBtr0301544|FBtr0308133|FBtr0112825|FBtr0112827|FBtr0112826|FBtr0340115|FBtr0310312|FBtr0308134 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15827682|15825495|15825722|15825722|15826608|15825722|15825722|15825722|15825722|15825722|15825722|15827681|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825495|15825722 GAATTG 6mer2-7 dme-miR-932-5p X + 15824566 15824610 3'utr sd FlyBase G46625.1 ACGGCTAAGAATTGCGATAATAAGACGAGTAATGAAATTGCCAAC 14 15824577 0.95915564 4 11 64 0.818181818 0.653212514 0.045454545 0.5 0.681818182 14 1 3 18 X:15824566-15824610 6 13 3294 FBgn0003345 3188.213333 125.3966667 192.3633333 0.004077519 0.103671017 0.067580447 -3 -3 -3 0.2 dme-miR-282-5p 6mer2-7 GAGGCT X 15825052 15825057 + X_15825052_15825057_+ 0.897271754 0.902944783 0.900108269 0.004011417 sd FBtr0112826|FBtr0074101|FBtr0308134|FBtr0310311|FBtr0074100|FBtr0346799|FBtr0308133|FBtr0308130|FBtr0308129|FBtr0112824|FBtr0112825|FBtr0112827|FBtr0074099|FBtr0308128|FBtr0340115|FBtr0310312|FBtr0310313|FBtr0308131|FBtr0308132|FBtr0301543|FBtr0301544 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15825722|15825722|15825722|15825722|15825722|15827682|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825495|15825495|15827681|15826608|15825722|15825722 X + 15825032 15825073 3'utr sd FlyBase G61753.1 ACAAGCAACCACAACCATTCGAGGCTGAGCAACACGAACACG 42 15825049 0.803691446 2 41 83 0.980392157 1.698970004 0.156862745 0.214285714 0.352941176 42 1 0 50 X:15825032-15825073 6 sd FBtr0346799|FBtr0310313|FBtr0301543|FBtr0308130|FBtr0308132|FBtr0074101|FBtr0308129|FBtr0112824|FBtr0310311|FBtr0074099|FBtr0308128|FBtr0308131|FBtr0074100|FBtr0301544|FBtr0308133|FBtr0112825|FBtr0112827|FBtr0112826|FBtr0340115|FBtr0310312|FBtr0308134 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15827682|15825495|15825722|15825722|15826608|15825722|15825722|15825722|15825722|15825722|15825722|15827681|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825495|15825722 GAGGCT 6mer2-7 dme-miR-282-5p X + 15825034 15825064 3'utr sd FlyBase G46627.1 AAGCAACCACAACCATTCGAGGCTGAGCAAC 19 15825050 0.822868326 2 18 39 0.891891892 1.51851394 0.081081081 0.684210526 0.837837838 19 4 0 33 X:15825034-15825064 6 30.5 3295 FBgn0003345 3188.213333 125.3966667 192.3633333 0.009566487 0.243228156 0.158554125 3 2 2.5 0.2 dme-miR-282-5p 6mer2-7 GAGGCT X 15825420 15825425 + X_15825420_15825425_+ 0.681548935 0.988085551 0.834817243 0.216754179 sd FBtr0112826|FBtr0074101|FBtr0308134|FBtr0310311|FBtr0074100|FBtr0346799|FBtr0308133|FBtr0308130|FBtr0308129|FBtr0112824|FBtr0112825|FBtr0112827|FBtr0074099|FBtr0308128|FBtr0340115|FBtr0310312|FBtr0310313|FBtr0308131|FBtr0308132|FBtr0301543|FBtr0301544 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15825722|15825722|15825722|15825722|15825722|15827682|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825495|15825495|15827681|15826608|15825722|15825722 X + 15825338 15825503 3'utr sd FlyBase G61756.1 GAGGACCCAACGCCGATGGAATCAGTAACAAAGGCCGTGAGCCGTGAGCGCCATATAATACCACCAGCCTTTAAGCAAGGTTGAGGCTTATTTTAAGGGTTAGAAATACGATTGCAAGGAACGACACAATCAGAGCTTTTTGTTTTCCACCCAAAACGAGAAAGAA 80 15825419 0.970365173 18 76 435 0.957894737 1.959041392 0.084210526 0.1625 0.294736842 80 4 0 91 X:15825338-15825503 6 sd FBtr0346799|FBtr0310313|FBtr0301543|FBtr0308130|FBtr0308132|FBtr0074101|FBtr0308129|FBtr0112824|FBtr0310311|FBtr0074099|FBtr0308128|FBtr0308131|FBtr0074100|FBtr0301544|FBtr0308133|FBtr0112825|FBtr0112827|FBtr0112826|FBtr0340115|FBtr0310312|FBtr0308134 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15827682|15825495|15825722|15825722|15826608|15825722|15825722|15825722|15825722|15825722|15825722|15827681|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825495|15825722 GAGGCT 6mer2-7 dme-miR-282-5p X + 15825346 15825479 3'utr sd FlyBase G46629.1 AACGCCGATGGAATCAGTAACAAAGGCCGTGAGCCGTGAGCGCCATATAATACCACCAGCCTTTAAGCAAGGTTGAGGCTTATTTTAAGGGTTAGAAATACGATTGCAAGGAACGACACAATCAGAGCTTTTTG 29 15825419 0.95973905 10 28 139 1 1.643452676 0.204545455 0.448275862 0.636363636 29 0 0 44 X:15825346-15825479 6 20.5 3296 FBgn0003345 3188.213333 125.3966667 192.3633333 0.006429934 0.16348122 0.106569166 1 1 1 0.2 dme-miR-317-3p 7mer-A1 GTGTTCA X 15825573 15825579 + X_15825573_15825579_+ 0.819669593 0.82200762 0.820838606 0.001653216 sd FBtr0112826|FBtr0074101|FBtr0308134|FBtr0310311|FBtr0074100|FBtr0346799|FBtr0308133|FBtr0308130|FBtr0308129|FBtr0112824|FBtr0112825|FBtr0112827|FBtr0074099|FBtr0308128|FBtr0340115|FBtr0308131|FBtr0308132|FBtr0301543|FBtr0301544 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15825722|15825722|15825722|15825722|15825722|15827682|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15827681|15826608|15825722|15825722 X + 15825515 15825616 3'utr sd FlyBase G61757.1 AAAAAAACCACATGGCAGGGGACAATGGAAGAGCCTCAAAACAAGAGATGATTGATTGGTGTTCAGTATCGAAATCAGATTTTTATTTGTGCAAAATAAAAA 36 15825568 0.94907559 15 33 206 0.928571429 1.591064607 0.166666667 0.111111111 0.238095238 36 3 0 39 X:15825515-15825616 7 sd FBtr0346799|FBtr0301543|FBtr0308130|FBtr0308132|FBtr0074101|FBtr0308129|FBtr0112824|FBtr0310311|FBtr0074099|FBtr0308128|FBtr0308131|FBtr0074100|FBtr0301544|FBtr0308133|FBtr0112825|FBtr0112827|FBtr0112826|FBtr0340115|FBtr0308134 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15827682|15825722|15825722|15826608|15825722|15825722|15825722|15825722|15825722|15825722|15827681|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722 GTGTTCA 7mer-A1 dme-miR-317-3p X + 15825557 15825613 3'utr sd FlyBase G46631.1 AAGAGATGATTGATTGGTGTTCAGTATCGAAATCAGATTTTTATTTGTGCAAAATAA 7 15825573 0.982724955 4 7 57 1 0.954242509 0.222222222 0.285714286 0.444444444 7 0 0 9 X:15825557-15825613 7 10 3297 FBgn0003345 3188.213333 125.3966667 192.3633333 0.003136553 0.079746936 0.051984959 5 0 2.5 0.2 dme-bantam-3p 8mer-A1 TGATCTCA X 15825755 15825762 + X_15825755_15825762_+ 0.630910695 0.630895132 0.630902914 1.10E-05 sd FBtr0346799|FBtr0308131|FBtr0308132 15824447|15824447|15824447 15827682|15827681|15826608 X + 15825728 15825784 3'utr sd FlyBase G61759.1 AAAAACAAAAAAAAAAATACATTTAAATGATCTCAAAGTTACTTAAAACATATTTTT 691 15825754 0.966940761 12 668 4799 0.97260274 2.152288344 0.180365297 0.218523878 0.383561644 691 19 5 852 X:15825728-15825784 8 sd FBtr0346799|FBtr0308132|FBtr0308131 15824447|15824447|15824447 15827682|15826608|15827681 TGATCTCA 8mer-A1 dme-bantam-3p X + 15825730 15825801 3'utr sd FlyBase G46633.1 AAACAAAAAAAAAAATACATTTAAATGATCTCAAAGTTACTTAAAACATATTTTTTGTGTATAATTTTTTTT 588 15825754 0.981386736 13 561 4084 0.957972806 1.986211716 0.196538937 0.294217687 0.487021014 588 27 7 775 X:15825730-15825801 8 637.5 3298 FBgn0003345 3188.213333 125.3966667 192.3633333 0.199955252 5.083867195 3.314041137 1 1 1 0.2 dme-miR-317-3p 6mer3-8 TGTGTT X 15826354 15826359 + X_15826354_15826359_+ 0.999553583 0.98225576 0.990904671 0.012231392 sd FBtr0346799|FBtr0308131|FBtr0308132 15824447|15824447|15824447 15827682|15827681|15826608 X + 15826323 15826363 3'utr sd FlyBase G61763.2 CAAAGGAGCGAGGGAGCGTAGGAGGATCTTGTGTGTTAAGC 7 15826353 0.976056522 5 6 31 0.875 0.84509804 0.375 0.142857143 0.25 7 1 0 7 X:15826323-15826363 6 sd FBtr0346799|FBtr0308132|FBtr0308131 15824447|15824447|15824447 15827682|15826608|15827681 TGTGTT 6mer3-8 dme-miR-317-3p X + 15826284 15826364 3'utr sd FlyBase G46637.1 TCCTGTCGTGGGAGCGCGAGTGTTGTGAGGTGAGGAGGGCAAAGGAGCGAGGGAGCGTAGGAGGATCTTGTGTGTTAAGCG 14 15826353 0.982937289 5 11 75 0.826086957 1.278753601 0.47826087 0.5 0.695652174 14 4 0 19 X:15826284-15826364 6 7 3299 FBgn0003345 3188.213333 125.3966667 192.3633333 0.002195587 0.055822855 0.036389471 1 1 1 0.2 dme-miR-278-3p 6mer2-7 CCACCG X 15826445 15826450 + X_15826445_15826450_+ 0.999921314 0.999243752 0.999582533 0.000479065 sd FBtr0346799|FBtr0308131|FBtr0308132 15824447|15824447|15824447 15827682|15827681|15826608 X + 15826391 15826464 3'utr sd FlyBase G61764.1 CATAGTGGCAAAAATGGATATGTAAGTAATTGAATTAAGCATGTGTCGAATGATCCACCGTTAATTAAATTATT 42 15826451 0.979624202 8 42 292 1 1.698970004 0 0.166666667 0.3 42 0 0 50 X:15826391-15826464 6 sd FBtr0346799|FBtr0308132|FBtr0308131 15824447|15824447|15824447 15827682|15826608|15827681 CCACCG 6mer2-7 dme-miR-278-3p X + 15826416 15826463 3'utr sd FlyBase G46638.1 GTAATTGAATTAAGCATGTGTCGAATGATCCACCGTTAATTAAATTAT 23 15826451 0.984871112 5 21 171 0.9375 1.477121255 0.0625 0.260869565 0.46875 23 2 0 30 X:15826416-15826463 6 31 3300 FBgn0003345 3188.213333 125.3966667 192.3633333 0.009723314 0.247215503 0.161153373 -6 -6 -6 0.2 dme-miR-999-3p 6mer2-7 GTTAAC X 15850014 15850019 - X_15850014_15850019_- 0.564571293 0.642832899 0.603702096 0.055339308 UBL3 FBtr0300787|FBtr0074174 15849729|15849729 15850363|15850363 X - 15850009 15850036 3'utr UBL3 FlyBase G67789.1 TTTTAGAAACCGGACTTGTTAACCTAAT 11 15850018 0.618038209 4 10 59 0.923076923 1.079181246 0.076923077 0.090909091 0.230769231 11 1 0 12 X:15850009-15850036 6 UBL3 FBtr0300787|FBtr0074174 15849729|15849729 15850363|15850363 GTTAAC 6mer2-7 dme-miR-999-3p X - 15849997 15850038 3'utr UBL3 FlyBase G51029.1 GCTTTTAGAAACCGGACTTGTTAACCTAATTAGAGAATGGGT 13 15850018 0.956789701 4 11 78 0.952380952 1.301029996 0.285714286 0.461538462 0.666666667 13 1 0 20 X:15849997-15850038 6 11.5 3301 FBgn0026076 761.7933333 45.88 70.04333333 0.015095958 0.25065388 0.164184077 -1 -1 -1 0.2 dme-miR-277-3p 6mer3-8 TGCATT X 15862920 15862925 + X_15862920_15862925_+ 0.653029085 0.561681855 0.60735547 0.064592225 Gbeta13F FBtr0074107|FBtr0074111|FBtr0074106|FBtr0346794|FBtr0074110|FBtr0331597|FBtr0074108 15862795|15862795|15862795|15862795|15862795|15862795|15862795 15863177|15866084|15866084|15866084|15866084|15866084|15866175 X + 15862906 15863043 3'utr Gbeta13F FlyBase G61788.1 AAAGAACTTGAAAATGCATTAAAGGGTGGGGTGGGGTGTCAGGTCAACGGTTGCGCAGTCTGCGGATAGTGTTTCACCCATCATCTACATTGTGATCTAATGTATATGATTCGGTGTTACCGTCTCTGTGGTAAATAT 36 15862923 0.82190442 14 36 247 1 1.662757832 0.282608696 0.25 0.413043478 36 0 0 46 X:15862906-15863043 6 Gbeta13F FBtr0074108|FBtr0331597|FBtr0074110|FBtr0346794|FBtr0074106|FBtr0074111|FBtr0074107 15862795|15862795|15862795|15862795|15862795|15862795|15862795 15866175|15866084|15866084|15866084|15866084|15866084|15863177 TGCATT 6mer3-8 dme-miR-277-3p X + 15862893 15862944 3'utr Gbeta13F FlyBase G46656.1 AGAGGAAAAAGAAAAAGAACTTGAAAATGCATTAAAGGGTGGGGTGGGGTGT 23 15862923 0.955168166 5 23 108 1 1.505149978 0.28125 0.304347826 0.5 23 0 0 32 X:15862893-15862944 6 18 3302 FBgn0001105 5526.04 154.0466667 236.8166667 0.003257305 0.116847708 0.076008164 -3 -3 -3 0.2 dme-miR-308-3p 7mer-m1 TGTGATT X 15864781 15864787 + X_15864781_15864787_+ 0.521219519 0.521207574 0.521213547 8.41E-06 Gbeta13F FBtr0074111|FBtr0074106|FBtr0346794|FBtr0074110|FBtr0331597|FBtr0074108 15862795|15862795|15862795|15862795|15862795|15862795 15866084|15866084|15866084|15866084|15866084|15866175 X + 15864698 15864809 3'utr Gbeta13F FlyBase G61796.1 TGTAATAAACTGATTGGTTTATTGACCTTCTTGAAGTATTCTTTAACGTTATAGTATCTTGGTCCGATAGGTAAATGGTAAATTGTGATTTAAAGTGAATAGTTTTTCAAGC 122 15864780 0.988532762 15 116 1074 0.963768116 1.646730386 0.282608696 0.123966942 0.231884058 121 3 2 133 X:15864698-15864809 7 Gbeta13F FBtr0074108|FBtr0331597|FBtr0074110|FBtr0346794|FBtr0074106|FBtr0074111 15862795|15862795|15862795|15862795|15862795|15862795 15866175|15866084|15866084|15866084|15866084|15866084 TGTGATT 7mer-m1 dme-miR-308-3p X + 15864760 15864803 3'utr Gbeta13F FlyBase G46666.1 TCCGATAGGTAAATGGTAAATTGTGATTTAAAGTGAATAGTTTT 80 15864780 0.653777165 6 80 661 1 2.045322979 0.297297297 0.325 0.513513514 80 0 0 111 X:15864760-15864803 7 97 3303 FBgn0001105 5526.04 154.0466667 236.8166667 0.017553257 0.629679318 0.40959955 1 1 1 0.2 dme-miR-14-3p 6mer3-8 AAGACT X 15876869 15876874 - X_15876869_15876874_- 0.829787521 0.941174676 0.885481099 0.078762644 tay FBtr0074167|FBtr0310065|FBtr0310066|FBtr0340414 15876681|15876366|15876681|15876681 15877234|15877234|15877234|15877234 X - 15876727 15876936 3'utr tay FlyBase G67818.1 GATTACGATGCAGATGCAGATGCAGATGTTTGTGGCAAACAAAAATCAAATTAAAAGAGGTTAAGACTTCCTTATACTTCAGACCTAGCATTCAACCTAAGCACTGAGTCCCCACATTGGCAAAATACTTTCCTCGATCTTAATATGGTCGCGCGTTGAAACGTCACATAAGTAATACGAACTTTACTTATTTTTAATGAATACAAATTA 173 15876876 0.978391699 22 161 1163 0.9375 1.653212514 0.015625 0.098265896 0.1875 173 9 3 180 X:15876727-15876936 6 tay FBtr0310066|FBtr0340414|FBtr0074167|FBtr0310065 15876681|15876681|15876681|15876366 15877234|15877234|15877234|15877234 AAGACT 6mer3-8 dme-miR-14-3p X - 15876757 15876951 3'utr tay FlyBase G51051.1 ACAGATGAAGATGAAGATTACGATGCAGATGCAGATGCAGATGTTTGTGGCAAACAAAAATCAAATTAAAAGAGGTTAAGACTTCCTTATACTTCAGACCTAGCATTCAACCTAAGCACTGAGTCCCCACATTGGCAAAATACTTTCCTCGATCTTAATATGGTCGCGCGTTGAAACGTCACATAAGTAATACGA 97 15876876 0.979746413 21 93 643 0.959459459 2.152288344 0.040540541 0.371134021 0.587837838 97 6 0 142 X:15876757-15876951 6 92 3304 FBgn0260938 850.7 11.95 18.32333333 0.108146233 7.69874477 5.020920502 2 2 2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 15887724 15887729 - X_15887724_15887729_- 0.527881033 0.486206179 0.507043606 0.029468534 MSBP FBtr0301598|FBtr0301598|FBtr0301598|FBtr0333719|FBtr0333719|FBtr0333719|FBtr0074166|FBtr0074166|FBtr0074166 15887565|15887565|15887565|15887565|15887565|15887565|15887565|15887565|15887565 15888035|15888035|15888035|15888035|15888035|15888035|15888035|15888035|15888035 X - 15887570 15887783 3'utr MSBP FlyBase G67853.1 CTTAGAGTGCAGCCTTGACAAAAGCTATAGTTGTTACTATAATTCACGTTGTGATGTGATCTTGTTCCATATATTATAGTCGTATATTCATACAAATGTAACAAACGGAAATCATAAAATTATTTAAGGAGGAGGCCAATGTGTGGAGGGTATGGGAGTCATTTTCGTGGCAATATAAATTTAAATGTAACTATATTTGAAATACAAATTAAAT 109 15887722 0.986928977 32 109 941 1 2.123851641 0.210526316 0.174311927 0.323308271 109 0 0 133 X:15887570-15887783 6 MSBP FBtr0301598|FBtr0301598|FBtr0301598|FBtr0333719|FBtr0333719|FBtr0333719|FBtr0074166|FBtr0074166|FBtr0074166 15887565|15887565|15887565|15887565|15887565|15887565|15887565|15887565|15887565 15888035|15888035|15888035|15888035|15888035|15888035|15888035|15888035|15888035 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 15887693 15887769 3'utr MSBP FlyBase G51080.1 TTGACAAAAGCTATAGTTGTTACTATAATTCACGTTGTGATGTGATCTTGTTCCATATATTATAGTCGTATATTCAT 55 15887722 0.991410554 12 50 541 0.931818182 1.436692598 0.125 0.454545455 0.659090909 55 4 2 82 X:15887693-15887769 6 60.5 3305 FBgn0030703 1227.653333 105.4533333 161.41 0.049281013 0.573713491 0.374821882 -7 -7 -7 0.2 dme-bantam-3p 6mer3-8 TGATCT X 15904409 15904414 + X_15904409_15904414_+ 0.819747494 0.677937927 0.748842711 0.10027453 shi FBtr0074119|FBtr0301597|FBtr0111037|FBtr0074122|FBtr0074118|FBtr0333718|FBtr0111036|FBtr0074121 15903798|15903798|15903798|15903798|15903798|15903798|15903798|15903798 15905068|15905068|15905068|15905068|15905068|15905667|15905068|15905068 X + 15904315 15904489 3'utr shi FlyBase G61854.1 CCTCCCCTAACTCTCCACACATTATCAACGGCATACGCTCAAAAGTTATGTAAACTATTTGTATGGGCAGATGCTTAGTGACGATATTAACCAATGATCTTAATTATATAGCTAACTATTAATAAATAGCTTTCGTTAACTGCATTGTGTTGTTGTTGATGTTAAACTATAAAAA 167 15904409 0.987375016 20 161 1424 0.971428571 2.008600172 0.071428571 0.203592814 0.366666667 167 5 1 204 X:15904315-15904489 6 shi FBtr0074118|FBtr0111036|FBtr0074121|FBtr0333718|FBtr0301597|FBtr0074122|FBtr0074119|FBtr0111037 15903798|15903798|15903798|15903798|15903798|15903798|15903798|15903798 15905068|15905068|15905068|15905667|15905068|15905068|15905068|15905068 TGATCT 6mer3-8 dme-bantam-3p X + 15904324 15904476 3'utr shi FlyBase G46713.1 ACTCTCCACACATTATCAACGGCATACGCTCAAAAGTTATGTAAACTATTTGTATGGGCAGATGCTTAGTGACGATATTAACCAATGATCTTAATTATATAGCTAACTATTAATAAATAGCTTTCGTTAACTGCATTGTGTTGTTGTTGATGT 96 15904409 0.929642359 18 94 789 0.98630137 1.857332496 0.04109589 0.364583333 0.582191781 96 1 1 144 X:15904324-15904476 6 110 3306 FBgn0003392 1552.753333 51.10333333 78.22666667 0.070841902 2.152501468 1.406170104 0 0 0 0.2 dme-bantam-3p 6mer3-8 TGATCT X 15906135 15906140 + X_15906135_15906140_+ 0.998539194 0.9761982 0.987368697 0.015797473 shi FBtr0333717|FBtr0340413|FBtr0301594|FBtr0301596|FBtr0074123|FBtr0301595|FBtr0074124 15905923|15905923|15905923|15905923|15905923|15905923|15905923 15906716|15906716|15906252|15906252|15906252|15906252|15906252 X + 15906118 15906154 3'utr shi FlyBase G61863.1 AAAAAGTGTTTTACACATGATCTTTTGGACAATTCAA 11 15906135 0.887108386 3 11 108 1 1.041392685 0.636363636 0 0 11 0 0 11 X:15906118-15906154 6 shi FBtr0074123|FBtr0301595|FBtr0340413|FBtr0074124|FBtr0301594|FBtr0301596|FBtr0333717 15905923|15905923|15905923|15905923|15905923|15905923|15905923 15906252|15906252|15906716|15906252|15906252|15906252|15906716 TGATCT 6mer3-8 dme-bantam-3p X + 15906120 15906225 3'utr shi FlyBase G46719.1 AAAGTGTTTTACACATGATCTTTTGGACAATTCAACATTCAAATTAGTGCTTTCGAATTAAGTTTATCGGGGATACCATTTACTTTTTAAAGTATATTTGAACGTG 9 15906135 0.988686838 7 9 84 1 1 0.3 0.111111111 0.2 9 0 0 10 X:15906120-15906225 6 7.5 3307 FBgn0003392 1552.753333 51.10333333 78.22666667 0.00483013 0.146761464 0.095875234 0 0 0 0.2 dme-miR-1003-3p 7mer-A1 TGTGAGA X 15935696 15935702 - X_15935696_15935702_- 0.758151802 0.47031771 0.614234756 0.203529444 Stim FBtr0308705 15934899 15938324 X - 15935676 15935723 5'utr Stim FlyBase G67900.1 CTACAGTCGGCCAGAGAGGCTTGTGAGAAATTGCGTAAGAAACGGTCA 11 15935702 0.950522658 6 9 40 0.818181818 0.954242509 0.090909091 0 0 11 2 0 9 X:15935676-15935723 7 Stim FBtr0308705 15934899 15938324 TGTGAGA 7mer-A1 dme-miR-1003-3p X - 15935696 15935725 5'utr Stim FlyBase G51116.1 AGCTACAGTCGGCCAGAGAGGCTTGTGAGA 8 15935702 0.621104993 2 8 26 1 1.041392685 0.090909091 0.375 0.545454545 8 0 0 11 X:15935696-15935725 6 9.5 3308 FBgn0045073 1420.51 79.57666667 121.2 0.006687739 0.119381728 0.078382838 0 0 0 0.2 dme-miR-282-5p 7mer-A1 GAGGCTA X 15937659 15937665 - X_15937659_15937665_- 0.626578942 0.74509909 0.685839016 0.083806437 Stim FBtr0308705 15934899 15938324 X - 15937638 15937684 5'utr Stim FlyBase G67907.1 TCAGGATCGCTTTGGCATGGAGGCTATTGCCAGCTTGCATCGTCAGC 15 15937667 0.935609347 2 13 102 0.947368421 1.255272505 0.105263158 0.2 0.368421053 15 1 0 18 X:15937638-15937684 7 Stim FBtr0308705 15934899 15938324 GAGGCTA 7mer-A1 dme-miR-282-5p X - 15937640 15937683 5'utr Stim FlyBase G51118.1 CAGGATCGCTTTGGCATGGAGGCTATTGCCAGCTTGCATCGTCA 7 15937667 0.978262545 2 7 48 1 1.146128036 0.357142857 0.857142857 0.928571429 7 0 0 14 X:15937640-15937683 7 9 3309 FBgn0045073 1420.51 79.57666667 121.2 0.006335753 0.113098479 0.074257426 2 2 2 0.2 dme-miR-965-3p 7mer-m8 TACGCTT X 15944222 15944228 + X_15944222_15944228_+ 0.585589076 0.619807816 0.602698446 0.024196275 CG8924 FBtr0074130 15944054 15944449 X + 15944203 15944279 3'utr CG8924 FlyBase G61872.1 ATACATAGGTTTACTTAATTACGCTTTGGAGATGCCACAGTTTTATCCTTGGTTGAAAAACTCTTGCCGTTCAATCA 38 15944221 0.833567663 6 36 342 0.954545455 1.62324929 0.431818182 0.131578947 0.25 38 2 0 42 X:15944203-15944279 7 CG8924 FBtr0074130 15944054 15944449 TACGCTT 7mer-m8 dme-miR-965-3p X + 15944203 15944243 3'utr CG8924 FlyBase G46725.1 ATACATAGGTTTACTTAATTACGCTTTGGAGATGCCACAGT 27 15944221 0.658914449 5 26 259 0.955555556 1.633468456 0.577777778 0.407407407 0.644444444 27 2 0 43 X:15944203-15944243 7 29.5 3310 FBgn0030710 226.3333333 10.62 16.19333333 0.130338733 2.777777778 1.82173734 1 1 1 0.2 dme-miR-79-3p 6mer2-7 AGCTTT X 15995132 15995137 + X_15995132_15995137_+ 0.962088943 0.987241648 0.974665295 0.017785645 exd FBtr0074137|FBtr0333322|FBtr0074135|FBtr0333323 15994971|15994971|15994971|15994971 15995996|15996509|15995996|15996509 X + 15995058 15995160 3'utr exd FlyBase G61892.1 AGTTTTTTCATAATTATGCGGCTTATATTTGCTTCTTCGCCAAGAACAACAATTCTTAAGGGATTTTTAAATTCAGCTTTCTGTCCTTTGGTTTCGAGTCAGA 42 15995136 0.97312565 14 37 397 0.910714286 1.40654018 0.267857143 0.214285714 0.410714286 42 4 1 51 X:15995058-15995160 6 exd FBtr0074135|FBtr0333323|FBtr0074137|FBtr0333322 15994971|15994971|15994971|15994971 15995996|15996509|15995996|15996509 AGCTTT 6mer2-7 dme-miR-79-3p X + 15995044 15995161 3'utr exd FlyBase G46740.1 AAAATCTAACATGCAGTTTTTTCATAATTATGCGGCTTATATTTGCTTCTTCGCCAAGAACAACAATTCTTAAGGGATTTTTAAATTCAGCTTTCTGTCCTTTGGTTTCGAGTCAGAT 28 15995136 0.993066792 11 23 279 0.88372093 1.579783597 0.162790698 0.321428571 0.558139535 28 5 0 38 X:15995044-15995161 6 20 3311 FBgn0000611 1497 64.64333333 99.30333333 0.013360053 0.309389986 0.201403108 -4 -4 -4 0.2 dme-miR-79-3p 6mer2-7 AGCTTT X 16078050 16078055 - X_16078050_16078055_- 0.879299425 0.880493437 0.879896431 0.000844285 Tob FBtr0301652|FBtr0310446 16074715|16077885 16079819|16079819 X - 16078037 16078074 5'utr Tob FlyBase G67976.1 AAGTTATTCAAGCTATGGAAGCTTTTACATATAAAAAC 13 16078059 0.850336211 2 12 104 0.888888889 1.204119983 0.055555556 0.307692308 0.5 13 2 0 16 X:16078037-16078074 6 Tob FBtr0310446|FBtr0301652 16077885|16074715 16079819|16079819 AGCTTT 6mer2-7 dme-miR-79-3p X - 16078036 16078074 5'utr Tob FlyBase G51168.1 AAGTTATTCAAGCTATGGAAGCTTTTACATATAAAAACA 8 16078059 0.975258079 2 8 62 1 0.954242509 0 0.125 0.222222222 8 0 0 9 X:16078036-16078074 6 10.5 3312 FBgn0028397 630.16 18.44 28.35666667 0.016662435 0.569414317 0.370283296 4 4 4 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 16093289 16093295 - X_16093289_16093295_- 0.784357698 0.794474499 0.789416098 0.007153658 CG42354 FBtr0299950|FBtr0299950|FBtr0299950|FBtr0310316|FBtr0310316|FBtr0310316|FBtr0299951|FBtr0299951|FBtr0299951|FBtr0310314|FBtr0310314|FBtr0310314|FBtr0310315|FBtr0310315|FBtr0310315|FBtr0299949|FBtr0299949|FBtr0299949 16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057 16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102 X - 16093272 16093305 3'utr CG42354 FlyBase G67989.1 TATATATATTTGTGATACCTATACTAATATTTTT 82 16093297 0.723195785 5 73 863 0.894736842 1.452297671 0 0.134146341 0.252631579 82 8 2 85 X:16093272-16093305 7 CG42354 FBtr0310316|FBtr0310316|FBtr0310316|FBtr0299950|FBtr0299950|FBtr0299950|FBtr0299949|FBtr0299949|FBtr0299949|FBtr0310315|FBtr0310315|FBtr0310315|FBtr0310314|FBtr0310314|FBtr0310314|FBtr0299951|FBtr0299951|FBtr0299951 16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057 16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 16093273 16093305 3'utr CG42354 FlyBase G51174.1 TATATATATTTGTGATACCTATACTAATATTTT 49 16093297 0.699319491 7 44 496 0.880597015 1.469822016 0 0.326530612 0.507462687 49 7 1 59 X:16093273-16093305 7 65.5 3313 FBgn0259700 906.0733333 39.32 60.44666667 0.072289954 1.665818922 1.083599868 2 2 2 0.2 dme-miR-276a-3p 7mer-A1 GTTCCTA X 16093917 16093923 - X_16093917_16093923_- 0.735193446 0.810714456 0.772953951 0.053401482 CG42354 FBtr0299950|FBtr0310316|FBtr0299951|FBtr0310314|FBtr0310315|FBtr0299949 16093057|16093057|16093057|16093057|16093057|16093057 16094102|16094102|16094102|16094102|16094102|16094102 X - 16093900 16094015 3'utr CG42354 FlyBase G67994.1 CGCAACAGAGGTCACATATACATATATACTTTAATCCCAAGATATACTTAAGGACAGAGTGTGCTAGTAAAGCGCACACCGAATTTGCGCTGGTTCCTAACTTATACATGTGTGTG 40 16093926 0.934980454 13 40 215 1 1.672097858 0.063829787 0.15 0.276595745 40 0 0 47 X:16093900-16094015 7 CG42354 FBtr0310316|FBtr0299950|FBtr0299949|FBtr0310315|FBtr0310314|FBtr0299951 16093057|16093057|16093057|16093057|16093057|16093057 16094102|16094102|16094102|16094102|16094102|16094102 GTTCCTA 7mer-A1 dme-miR-276a-3p X - 16093889 16093998 3'utr CG42354 FlyBase G51179.1 ATACATATATACTTTAATCCCAAGATATACTTAAGGACAGAGTGTGCTAGTAAAGCGCACACCGAATTTGCGCTGGTTCCTAACTTATACATGTGTGTGTTTGTAATATT 22 16093926 0.975771596 10 20 128 0.96875 1.491361694 0.15625 0.318181818 0.53125 22 1 0 31 X:16093889-16093998 7 11.5 3314 FBgn0259700 906.0733333 39.32 60.44666667 0.012692129 0.292472024 0.190250358 3 3 3 0.2 dme-bantam-3p 6mer3-8 TGATCT X 16277537 16277542 + X_16277537_16277542_+ 0.989713253 0.999796022 0.994754638 0.007129546 Prosalpha4 FBtr0074210 16277308 16277587 X + 16277487 16277553 3'utr Prosalpha4 FlyBase G61937.1 AATTACCACTTTCTATTCTTCGGAACCCTGTAAAACGGTATGAAAATATTTGATCTGTATAAAATAC 18 16277537 0.691296933 8 17 141 0.952380952 1.301029996 0.19047619 0.111111111 0.238095238 18 1 0 20 X:16277487-16277553 6 Prosalpha4 FBtr0074210 16277308 16277587 TGATCT 6mer3-8 dme-bantam-3p X + 16277523 16277551 3'utr Prosalpha4 FlyBase G46771.1 GGTATGAAAATATTTGATCTGTATAAAAT 6 16277536 0.720683801 2 5 51 0.9 0.954242509 0.1 0.5 0.7 6 1 0 9 X:16277523-16277551 6 8 3315 FBgn0004066 1281.22 133.8966667 204.6 0.006244049 0.059747567 0.039100684 0 1 0.5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA X 16284201 16284208 + X_16284201_16284208_+ 0.674956897 0.674980687 0.674968792 1.68E-05 eas FBtr0308617|FBtr0343520|FBtr0308618 16283732|16283732|16283732 16285618|16285618|16285618 X + 16284146 16284226 3'utr eas FlyBase G61942.1 GGCGACCAAACCCATGCCGATGATTTGGAAGAAGACGCAGAGCTTTCTTGATTTAGTACCTGAACGTTTTAGTGATGCTGA 23 16284198 0.98959922 11 22 208 0.931034483 1.431363764 0.172413793 0.260869565 0.413793103 23 2 0 27 X:16284146-16284226 8 eas FBtr0308618|FBtr0343520|FBtr0308617 16283732|16283732|16283732 16285618|16285618|16285618 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" X + 16284156 16284225 3'utr eas FlyBase G46774.1 CCCATGCCGATGATTTGGAAGAAGACGCAGAGCTTTCTTGATTTAGTACCTGAACGTTTTAGTGATGCTG 9 16284198 0.989194274 7 8 75 0.857142857 1.079181246 0.357142857 0.444444444 0.642857143 9 2 0 12 X:16284156-16284225 8 13 3316 FBgn0000536 1202.386667 57.26666667 87.69666667 0.01081183 0.227008149 0.148238245 3 3 3 0.2 dme-bantam-3p 6mer3-8 TGATCT X 16284434 16284439 + X_16284434_16284439_+ 0.971727478 0.976861229 0.974294354 0.003630074 eas FBtr0308617|FBtr0343520|FBtr0308618 16283732|16283732|16283732 16285618|16285618|16285618 X + 16284374 16284475 3'utr eas FlyBase G61943.1 ACCTCGAGGCTCTGGACAGTCCGATTGTCTTCTCCCACAACGATCTTCTGCTGGGAAATGTGATCTATACGCAGAGCCTGAATACGGTGAACTTCATCGACT 17 16284440 0.977931239 7 15 104 0.894736842 1.230448921 0.315789474 0.117647059 0.210526316 17 2 0 17 X:16284374-16284475 6 eas FBtr0308618|FBtr0343520|FBtr0308617 16283732|16283732|16283732 16285618|16285618|16285618 TGATCT 6mer3-8 dme-bantam-3p X + 16284369 16284457 3'utr eas FlyBase G46775.1 TGAATACCTCGAGGCTCTGGACAGTCCGATTGTCTTCTCCCACAACGATCTTCTGCTGGGAAATGTGATCTATACGCAGAGCCTGAATA 20 16284440 0.953240683 9 17 96 0.892857143 1.096910013 0.25 0.368421053 0.571428571 19 2 1 25 X:16284369-16284457 6 11 3317 FBgn0000536 1202.386667 57.26666667 87.69666667 0.009148471 0.192083818 0.125432362 -6 -6 -6 0.2 dme-miR-318-3p 8mer-A1 CCCAGTGA X 16285152 16285159 + X_16285152_16285159_+ 0.662937302 0.661718461 0.662327881 0.000861822 eas FBtr0308617|FBtr0343519|FBtr0074212|FBtr0343520|FBtr0308618|FBtr0074214|FBtr0074211|FBtr0308619 16283732|16285102|16285102|16283732|16283732|16285102|16285102|16285102 16285618|16285618|16285618|16285618|16285618|16285618|16285618|16285618 X + 16285146 16285196 3'utr eas FlyBase G61945.1 TATGTGCCCAGTGATATATGTATAAACTAAGGCTGGAACGGGTCTCAATGT 22 16285169 0.765860597 6 14 135 0.615384615 0.903089987 0.423076923 0.090909091 0.230769231 22 9 1 16 X:16285146-16285196 8 eas FBtr0074211|FBtr0308619|FBtr0308618|FBtr0074214|FBtr0074212|FBtr0343520|FBtr0308617|FBtr0343519 16285102|16285102|16283732|16285102|16285102|16283732|16283732|16285102 16285618|16285618|16285618|16285618|16285618|16285618|16285618|16285618 CCCAGTGA 8mer-A1 dme-miR-318-3p X + 16285144 16285206 3'utr eas FlyBase G46777.1 ATTATGTGCCCAGTGATATATGTATAAACTAAGGCTGGAACGGGTCTCAATGTTATACATATG 19 16285172 0.811143602 8 16 106 0.827586207 0.77815125 0.551724138 0.473684211 0.655172414 19 2 3 24 X:16285144-16285206 8 7 3318 FBgn0000536 1202.386667 57.26666667 87.69666667 0.005821755 0.122235157 0.079820594 -17 -20 -18.5 0.2 dme-miR-965-3p 7mer-m8 TACGCTT X 16293262 16293268 + X_16293262_16293268_+ 0.609123658 0.612641576 0.610882617 0.002487531 caz FBtr0334992|FBtr0334990|FBtr0334991|FBtr0074217 16292078|16293194|16293194|16293194 16293520|16293520|16293520|16293520 X + 16293162 16293336 stop_codon caz FlyBase G61967.1 AAACGATGGAGGCATGCGCTCGAGACCATATTAAGCGCATGGTAGCCAGCCGAACGCGGCACCTATTTTTTTCACTTTTACTTATTAATTGTAGCGAGAGTACGCTTTTAAATGTACTTTTAAAATTAACAGTCAGAGCAACTTTTAAATGATAATTGCCAGCACACGACTTCAT 71 16293269 0.985598263 25 68 552 0.966292135 1.633468456 0.337078652 0.183098592 0.348314607 71 2 1 86 X:16293162-16293336 7 caz FBtr0334991|FBtr0074217|FBtr0334992|FBtr0334990 16293194|16293194|16292078|16293194 16293520|16293520|16293520|16293520 TACGCTT 7mer-m8 dme-miR-965-3p X + 16293228 16293309 3'utr caz FlyBase G46789.1 TTTTTTCACTTTTACTTATTAATTGTAGCGAGAGTACGCTTTTAAATGTACTTTTAAAATTAACAGTCAGAGCAACTTTTAA 42 16293269 0.985810615 13 41 341 0.983870968 1.785329835 0.290322581 0.404761905 0.596774194 42 1 0 61 X:16293228-16293309 7 38 3319 FBgn0011571 288.6766667 20.94333333 31.84666667 0.131635163 1.814419863 1.193217501 -7 -7 -7 0.2 dme-miR-1012-3p 6mer3-8 TTGACT X 16293381 16293386 + X_16293381_16293386_+ 0.988860175 0.985947744 0.98740396 0.002059449 caz FBtr0334992|FBtr0334990|FBtr0334991|FBtr0074217 16292078|16293194|16293194|16293194 16293520|16293520|16293520|16293520 X + 16293365 16293492 3'utr caz FlyBase G61968.1 ACGGTTATCGCTCGTTTTGACTGAATTATATTATATAATTATGTAATCTAATTTAACAACTGTAACTGTAACATGGTACATACGAATAAACATATATATATGTATACATATATAGCTCATATATATGT 37 16293381 0.907989108 18 33 335 0.857142857 1.322219295 0.06122449 0.243243243 0.428571429 37 6 1 42 X:16293365-16293492 6 caz FBtr0334991|FBtr0074217|FBtr0334992|FBtr0334990 16293194|16293194|16292078|16293194 16293520|16293520|16293520|16293520 TTGACT 6mer3-8 dme-miR-1012-3p X + 16293360 16293492 3'utr caz FlyBase G46790.1 CACACACGGTTATCGCTCGTTTTGACTGAATTATATTATATAATTATGTAATCTAATTTAACAACTGTAACTGTAACATGGTACATACGAATAAACATATATATATGTATACATATATAGCTCATATATATGT 32 16293381 0.770261156 16 28 320 0.905660377 1.681241237 0 0.40625 0.641509434 32 5 0 48 X:16293360-16293492 6 20.5 3320 FBgn0011571 288.6766667 20.94333333 31.84666667 0.071013706 0.978831768 0.643709441 0 0 0 0.2 dme-miR-318-3p 6mer3-8 CCCAGT X 16302979 16302984 + X_16302979_16302984_+ 0.964718209 0.972947405 0.968832807 0.005818923 CG3632 FBtr0344216 16302932 16303308 X + 16302969 16303007 3'utr CG3632 FlyBase G61999.1 AGCTTTTTAACCCAGTTAGGCTATGTGGATCCTGCTACA 11 16302985 0.763209204 4 11 92 1 1.079181246 0.166666667 0.090909091 0.166666667 11 0 0 12 X:16302969-16303007 6 CG3632 FBtr0344216 16302932 16303308 CCCAGT 6mer3-8 dme-miR-318-3p X + 16302960 16303005 3'utr CG3632 FlyBase G46814.1 CAAACGAAAAGCTTTTTAACCCAGTTAGGCTATGTGGATCCTGCTA 9 16302993 0.974970901 5 9 60 1 1.079181246 0 0.222222222 0.416666667 9 0 0 12 X:16302960-16303005 6 9 3321 FBgn0030735 647.8533333 19.21 29.39333333 0.013892033 0.468505986 0.30619188 -6 -14 -10 0.2 dme-miR-7-5p 6mer3-8 GTCTTC X 16303078 16303083 + X_16303078_16303083_+ 0.998804048 0.985637641 0.992220845 0.009310051 CG3632 FBtr0344216 16302932 16303308 X + 16303059 16303096 stop_codon CG3632 FlyBase G62000.1 AGGCGAAGGACGATGAGACGTCTTCTGCGATTTCCTAA 43 16303082 0.93661744 5 42 285 0.980769231 1.707570176 0 0.209302326 0.346153846 43 1 0 51 X:16303059-16303096 6 CG3632 FBtr0344216 16302932 16303308 GTCTTC 6mer3-8 dme-miR-7-5p X + 16303028 16303094 stop_codon CG3632 FlyBase G46815.1 CAGGAGTACGCTGCGGTACCTGCAGAATCCCAGGCGAAGGACGATGAGACGTCTTCTGCGATTTCCT 14 16303082 0.977404326 4 14 90 1 1.414973348 0.153846154 0.571428571 0.769230769 14 0 0 26 X:16303028-16303094 6 27 3322 FBgn0030735 647.8533333 19.21 29.39333333 0.0416761 1.405517959 0.918575641 -4 -4 -4 0.2 dme-bantam-3p 6mer3-8 TGATCT X 16317820 16317825 - X_16317820_16317825_- 0.995280796 0.999173687 0.997227242 0.002752696 Cyp1 FBtr0074238 16317671 16318181 X - 16317798 16317874 3'utr Cyp1 FlyBase G68038.1 AAGAAAAACAATGAGACGACAAGAGTCGAGAGGGGCTTAGAAAAATGTTTGATCTTTTGATGTTGGCTTACTTACTA 37 16317826 0.999985575 10 36 351 0.978723404 1.662757832 0.14893617 0.243243243 0.404255319 37 1 0 46 X:16317798-16317874 6 Cyp1 FBtr0074238 16317671 16318181 TGATCT 6mer3-8 dme-bantam-3p X - 16317802 16317876 3'utr Cyp1 FlyBase G51208.1 AGAAGAAAAACAATGAGACGACAAGAGTCGAGAGGGGCTTAGAAAAATGTTTGATCTTTTGATGTTGGCTTACTT 29 16317819 0.987721101 9 27 250 0.934782609 1.156347201 0.239130435 0.379310345 0.608695652 29 1 2 43 X:16317802-16317876 6 27 3323 FBgn0004432 7157.433333 716.86 1097.683333 0.003772302 0.037664258 0.024597258 1 -6 -2.5 0.2 dme-miR-277-3p 7mer-m8 TGCATTT X 16318110 16318116 - X_16318110_16318116_- 0.618970858 0.620195918 0.619583388 0.000866206 Cyp1 FBtr0074238 16317671 16318181 X - 16318100 16318162 3'utr Cyp1 FlyBase G68041.1 AACAGCAACATTGCAAGAAGAAAAATCTGTTAAGACGAAAACCATTTGCATTTTCTCCAAAAC 26 16318117 0.850893062 8 24 139 0.9375 1.477121255 0.125 0.192307692 0.34375 26 2 0 30 X:16318100-16318162 7 Cyp1 FBtr0074238 16317671 16318181 TGCATTT 7mer-m8 dme-miR-277-3p X - 16318100 16318159 3'utr Cyp1 FlyBase G51210.1 AGCAACATTGCAAGAAGAAAAATCTGTTAAGACGAAAACCATTTGCATTTTCTCCAAAAC 19 16318116 0.80387963 8 18 109 0.958333333 1.361727836 0.041666667 0.263157895 0.416666667 19 1 0 23 X:16318100-16318159 7 15 3324 FBgn0004432 7157.433333 716.86 1097.683333 0.002095723 0.020924588 0.013665143 1 0 0.5 0.2 dme-miR-184-5p 6mer3-8 TGATAA X 16321441 16321446 - X_16321441_16321446_- 0.799950284 0.962846693 0.881398488 0.115185149 CG9917 FBtr0331756|FBtr0074237 16321429|16321429 16322047|16322047 X - 16321430 16321464 3'utr CG9917 FlyBase G68047.1 ATTATTGTAATAATAAAGTGATAAATGTAAAAAGA 20 16321452 0.759737074 6 17 145 0.869565217 1 0.043478261 0.15 0.260869565 20 2 1 20 X:16321430-16321464 6 CG9917 FBtr0331756|FBtr0074237 16321429|16321429 16322047|16322047 TGATAA 6mer3-8 dme-miR-184-5p X - 16321433 16321462 3'utr CG9917 FlyBase G51218.1 TATTGTAATAATAAAGTGATAAATGTAAAA 14 16321452 0.713158982 7 13 87 0.952380952 1.301029996 0 0.357142857 0.571428571 14 1 0 20 X:16321433-16321462 6 16 3325 FBgn0030740 1612.983333 110.1633333 169.58 0.009919507 0.145238888 0.094350749 6 6 6 0.2 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT X 16321797 16321803 - X_16321797_16321803_- 0.619382655 0.620137886 0.619760271 0.000534007 CG9917 FBtr0331756|FBtr0074237 16321429|16321429 16322047|16322047 X - 16321741 16321830 3'utr CG9917 FlyBase G68048.3 AGGCTAGCCAGCCATATCGTTTTTGTTTGGTGCTTCTAATTTATGTAATTAATTGCCAATTGATGTATGTATGTATGTAGTATTGTAAAC 48 16321804 0.81168328 13 47 592 1 1.770852012 0.169491525 0.166666667 0.322033898 48 0 0 59 X:16321741-16321830 7 CG9917 FBtr0331756|FBtr0074237 16321429|16321429 16322047|16322047 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" X - 16321655 16321831 3'utr CG9917 FlyBase G51220.1 CAGGCTAGCCAGCCATATCGTTTTTGTTTGGTGCTTCTAATTTATGTAATTAATTGCCAATTGATGTATGTATGTATGTAGTATTGTAAACAATGCTTATACTTCCTTCTAGTTTTACTTCTGAATCAGAAATTCTTCTGGCCTTTGTCATGCGTTTATCTAATGCTTTATTTCCGT 49 16321804 0.994765471 14 43 591 0.926470588 1.799340549 0.235294118 0.285714286 0.485294118 49 5 0 63 X:16321655-16321831 7 35.5 3326 FBgn0030740 1612.983333 110.1633333 169.58 0.022008907 0.322248782 0.209340724 1 1 1 0.2 dme-miR-965-3p 6mer2-7 ACGCTT X 16321984 16321989 - X_16321984_16321989_- 0.855342712 0.623724526 0.739533619 0.1637788 CG9917 FBtr0331756|FBtr0074237 16321429|16321429 16322047|16322047 X - 16321963 16322023 3'utr CG9917 FlyBase G68050.1 TATCTCGAATCCGAATCTGTAAAACGCCTTCTCAACGCTTTGACTTTGGCATTCCAAAGCG 12 16321984 0.979003954 7 11 79 0.928571429 1.113943352 0.142857143 0.166666667 0.285714286 12 1 0 13 X:16321963-16322023 6 CG9917 FBtr0331756|FBtr0074237 16321429|16321429 16322047|16322047 ACGCTT 6mer2-7 dme-miR-965-3p X - 16321962 16322001 3'utr CG9917 FlyBase G51222.1 AACGCCTTCTCAACGCTTTGACTTTGGCATTCCAAAGCGA 10 16321982 0.711417124 5 10 73 1 1.146128036 0.285714286 0.4 0.571428571 10 0 0 14 X:16321962-16322001 6 9 3327 FBgn0030740 1612.983333 110.1633333 169.58 0.005579723 0.081696874 0.053072296 -5 -7 -6 0.2 dme-miR-12-5p 7mer-m8 AATACTC X 16337819 16337825 + X_16337819_16337825_+ 0.674234296 0.672005143 0.673119719 0.001576282 Dsp1 FBtr0089259|FBtr0289960|FBtr0089263|FBtr0339766|FBtr0089261|FBtr0089262|FBtr0089260 16337806|16337806|16337806|16337806|16337806|16337806|16337806 16340443|16338771|16340624|16338884|16340443|16338771|16340443 X + 16337768 16337894 stop_codon Dsp1 FlyBase G62025.1 CGACGACGACGGCGATGGAGATGATGACGAGAACCAATAGGTTTAGCAGTAAATACTCTTCACTATTTATACACACGATCGTTGTCGCGATGGAGGAAAGAAACATGATAACGTTGGTTGATCTATT 51 16337821 0.977751035 17 46 313 0.915254237 1.431363764 0.220338983 0.137254902 0.254237288 51 4 1 54 X:16337768-16337894 7 Dsp1 FBtr0089261|FBtr0089262|FBtr0089260|FBtr0089259|FBtr0289960|FBtr0089263|FBtr0339766 16337806|16337806|16337806|16337806|16337806|16337806|16337806 16340443|16338771|16340443|16340443|16338771|16340624|16338884 AATACTC 7mer-m8 dme-miR-12-5p X + 16337765 16337894 stop_codon Dsp1 FlyBase G46837.1 CGACGACGACGACGGCGATGGAGATGATGACGAGAACCAATAGGTTTAGCAGTAAATACTCTTCACTATTTATACACACGATCGTTGTCGCGATGGAGGAAAGAAACATGATAACGTTGGTTGATCTATT 23 16337821 0.974605725 10 22 138 0.947368421 1.556302501 0.131578947 0.52173913 0.710526316 23 2 0 36 X:16337765-16337894 7 13.5 3328 FBgn0011764 2716.763333 96.47 148.13 0.004969148 0.139939878 0.091136164 -2 -2 -2 0.2 dme-miR-305-3p 6mer2-7 TGTGCC X 16337942 16337947 + X_16337942_16337947_+ 0.995492133 0.999999893 0.997746013 0.003187496 Dsp1 FBtr0089259|FBtr0289960|FBtr0089263|FBtr0339766|FBtr0089261|FBtr0089262|FBtr0089260 16337806|16337806|16337806|16337806|16337806|16337806|16337806 16340443|16338771|16340624|16338884|16340443|16338771|16340443 X + 16337935 16337973 5'utr Dsp1 FlyBase G62026.1 ATAAGGGTGTGCCCGCTTTAGAGGTTTCGCTTTCCGGTA 11 16337951 0.881112217 3 9 110 0.857142857 1.079181246 0 0.272727273 0.428571429 11 2 0 12 X:16337935-16337973 6 Dsp1 FBtr0089261|FBtr0089262|FBtr0089260|FBtr0089259|FBtr0289960|FBtr0089263|FBtr0339766 16337806|16337806|16337806|16337806|16337806|16337806|16337806 16340443|16338771|16340443|16340443|16338771|16340624|16338884 TGTGCC 6mer2-7 dme-miR-305-3p X + 16337895 16337973 5'utr Dsp1 FlyBase G46838.1 ATCAGGTTGGCCAATGTGTGTTGAATATAAATTTATATATATAAGGGTGTGCCCGCTTTAGAGGTTTCGCTTTCCGGTA 10 16337950 0.992114475 6 8 94 0.785714286 0.740362689 0.428571429 0.3 0.5 10 2 1 11 X:16337895-16337973 6 6.5 3329 FBgn0011764 2716.763333 96.47 148.13 0.002392553 0.06737846 0.043880375 -9 -8 -8.5 0.2 dme-miR-276a-3p 7mer-A1 GTTCCTA X 16338315 16338321 + X_16338315_16338321_+ 0.79627548 0.813270865 0.804773172 0.012017563 Dsp1 FBtr0089259|FBtr0289960|FBtr0089263|FBtr0339766|FBtr0089261|FBtr0089262|FBtr0089260 16337806|16337806|16337806|16337806|16337806|16337806|16337806 16340443|16338771|16340624|16338884|16340443|16338771|16340443 X + 16338295 16338326 5'utr Dsp1 FlyBase G62027.1 CGAAGAGAAGAGAAACCATTGTTCCTAGTGCA 22 16338314 0.961808214 4 22 109 1 1.397940009 0.48 0.136363636 0.24 22 0 0 25 X:16338295-16338326 7 Dsp1 FBtr0089261|FBtr0089262|FBtr0089260|FBtr0089259|FBtr0289960|FBtr0089263|FBtr0339766 16337806|16337806|16337806|16337806|16337806|16337806|16337806 16340443|16338771|16340443|16340443|16338771|16340624|16338884 GTTCCTA 7mer-A1 dme-miR-276a-3p X + 16338296 16338334 5'utr Dsp1 FlyBase G46839.1 GAAGAGAAGAGAAACCATTGTTCCTAGTGCATTTCGAAA 9 16338313 0.963563413 3 9 48 1 1.113943352 0.307692308 0.444444444 0.615384615 9 0 0 13 X:16338296-16338334 7 15.5 3330 FBgn0011764 2716.763333 96.47 148.13 0.005705318 0.160671711 0.104637818 1 2 1.5 0.2 dme-miR-2a-2-5p 7mer-A1 GATGAGA X 16339340 16339346 + X_16339340_16339346_+ 0.781602588 0.782036018 0.781819303 0.00030646 Dsp1 FBtr0089259|FBtr0089263|FBtr0089261|FBtr0089260 16337806|16337806|16337806|16337806 16340443|16340624|16340443|16340443 X + 16339190 16339521 3'utr Dsp1 FlyBase G62031.1 AGCCACGATCATAAGATACGGAAAGTTAGTCTTGGTTGGTTCGGTGCGCTTCGTGATGAGGTGGGAAGCAACCGCAACGCTGTCGTCGGACATTGCAACAATTGTTGTTGACTTGGCTGGCCATGTATATACTATTTGAAGTATTATTTAGATGAGACTACGTAGAAATTAACAAGAATCGAGAGCAAATAACGACATCATACAAGCCTAATATTAGAGTAGATTTCAGCGGGCCTGCAAAGTAATGTAAATTGCGTAGAAACCTTGAATATATTGTAGACTAGTTTTTTGAGGACTAGTATTGCCCAAAATGTTCCAGGCACAGAAACAGA 333 16339342 0.980574246 46 322 2376 0.971279373 2.57054294 0.224543081 0.138138138 0.250652742 333 11 0 372 X:16339190-16339521 7 Dsp1 FBtr0089261|FBtr0089260|FBtr0089259|FBtr0089263 16337806|16337806|16337806|16337806 16340443|16340443|16340443|16340624 GATGAGA 7mer-A1 dme-miR-2a-2-5p X + 16339276 16339442 3'utr Dsp1 FlyBase G46848.1 CGGACATTGCAACAATTGTTGTTGACTTGGCTGGCCATGTATATACTATTTGAAGTATTATTTAGATGAGACTACGTAGAAATTAACAAGAATCGAGAGCAAATAACGACATCATACAAGCCTAATATTAGAGTAGATTTCAGCGGGCCTGCAAAGTAATGTAAATT 167 16339342 0.978834893 22 159 1207 0.953846154 2.394451681 0.207692308 0.407185629 0.619230769 167 12 0 248 X:16339276-16339442 7 182.5 3331 FBgn0011764 2716.763333 96.47 148.13 0.067175524 1.891779828 1.232025923 -2 -2 -2 0.2 dme-miR-278-3p 7mer-A1 CCACCGA X 16339913 16339919 + X_16339913_16339919_+ 0.697588796 0.809979694 0.753784245 0.079472368 Dsp1 FBtr0089259|FBtr0089263|FBtr0089261|FBtr0089260 16337806|16337806|16337806|16337806 16340443|16340624|16340443|16340443 X + 16339870 16339952 3'utr Dsp1 FlyBase G62034.1 TACATATATATTTTTTAGCATGATTTTGATAGAGAATAACTCGCCACCGAGATTATATTCATAGAAGTGTGTCTAGGTTAAAC 77 16339922 0.847999238 19 75 569 0.966292135 1.33243846 0.269662921 0.142857143 0.258426966 77 0 3 86 X:16339870-16339952 7 Dsp1 FBtr0089261|FBtr0089260|FBtr0089259|FBtr0089263 16337806|16337806|16337806|16337806 16340443|16340443|16340443|16340624 CCACCGA 7mer-A1 dme-miR-278-3p X + 16339877 16339945 3'utr Dsp1 FlyBase G46851.1 ATATTTTTTAGCATGATTTTGATAGAGAATAACTCGCCACCGAGATTATATTCATAGAAGTGTGTCTAG 31 16339923 0.784384777 8 28 210 0.869565217 1.602059991 0.239130435 0.387096774 0.586956522 31 6 0 40 X:16339877-16339945 7 43 3332 FBgn0011764 2716.763333 96.47 148.13 0.015827658 0.445734425 0.29028556 -9 -10 -9.5 0.2 dme-miR-276a-3p 6mer3-8 AGTTCC X 16340026 16340031 + X_16340026_16340031_+ 0.747036769 0.99999999 0.873518379 0.178871994 Dsp1 FBtr0089259|FBtr0089263|FBtr0089261|FBtr0089260 16337806|16337806|16337806|16337806 16340443|16340624|16340443|16340443 X + 16339970 16340096 3'utr Dsp1 FlyBase G62034.2 CTACAATTCGACGGTAATCCATCCCCTCTATATTAATAAATTACTATGAAAATTCCAGTTCCCTGTGCGCTTTGTTATAAGAACTAAACTATTATGAAATAAACTTTTAGAAATGAGATTCTTATTA 116 16340034 0.79397151 22 112 924 0.973856209 1.696065014 0.052287582 0.25862069 0.437908497 116 2 2 149 X:16339970-16340096 6 Dsp1 FBtr0089261|FBtr0089260|FBtr0089259|FBtr0089263 16337806|16337806|16337806|16337806 16340443|16340443|16340443|16340624 AGTTCC 6mer3-8 dme-miR-276a-3p X + 16340012 16340059 3'utr Dsp1 FlyBase G46853.1 ACTATGAAAATTCCAGTTCCCTGTGCGCTTTGTTATAAGAACTAAACT 64 16340042 0.601572389 7 59 519 0.942307692 1.514104821 0.115384615 0.46875 0.673076923 64 4 2 98 X:16340012-16340059 6 71 3333 FBgn0011764 2716.763333 96.47 148.13 0.026134039 0.735980097 0.479308715 -8 -16 -12 0.2 dme-miR-965-3p 7mer-m8 TACGCTT X 16340176 16340182 + X_16340176_16340182_+ 0.612851221 0.615524704 0.614187963 0.00189045 Dsp1 FBtr0089259|FBtr0089263|FBtr0089261|FBtr0089260 16337806|16337806|16337806|16337806 16340443|16340624|16340443|16340443 X + 16340121 16340198 3'utr Dsp1 FlyBase G62035.1 GATGATGAATGATGTGTTCTTCAAAACCATTTGTCTTAAATCTTAATTTTTGATTTACGCTTGGTACATACGTAATAG 10 16340175 0.985029416 5 10 100 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 X:16340121-16340198 7 Dsp1 FBtr0089261|FBtr0089260|FBtr0089259|FBtr0089263 16337806|16337806|16337806|16337806 16340443|16340443|16340443|16340624 TACGCTT 7mer-m8 dme-miR-965-3p X + 16340165 16340196 3'utr Dsp1 FlyBase G46855.1 AATTTTTGATTTACGCTTGGTACATACGTAAT 8 16340175 0.775072616 4 7 63 0.75 0.954242509 0 0.375 0.583333333 8 3 0 9 X:16340165-16340196 7 7.5 3334 FBgn0011764 2716.763333 96.47 148.13 0.002760638 0.077744376 0.050631202 1 1 1 0.2 dme-miR-79-3p 7mer-m8 TAGCTTT X 16340244 16340250 + X_16340244_16340250_+ 0.615488841 0.610849493 0.613169167 0.00328048 Dsp1 FBtr0089259|FBtr0089263|FBtr0089261|FBtr0089260 16337806|16337806|16337806|16337806 16340443|16340624|16340443|16340443 X + 16340212 16340273 3'utr Dsp1 FlyBase G62036.1 ATGTTGTTACAAATCCCAATAATGAACAGCTTTAGCTTTTATATTTGATAGACAACAACACT 35 16340243 0.982887649 6 32 332 0.921052632 1.544068044 0.105263158 0.085714286 0.157894737 35 3 0 35 X:16340212-16340273 7 Dsp1 FBtr0089261|FBtr0089260|FBtr0089259|FBtr0089263 16337806|16337806|16337806|16337806 16340443|16340443|16340443|16340624 TAGCTTT 7mer-m8 dme-miR-79-3p X + 16340212 16340265 3'utr Dsp1 FlyBase G46856.1 ATGTTGTTACAAATCCCAATAATGAACAGCTTTAGCTTTTATATTTGATAGACA 19 16340243 0.758336317 5 18 174 0.964285714 1.431363764 0 0.368421053 0.571428571 19 1 0 27 X:16340212-16340265 7 25 3335 FBgn0011764 2716.763333 96.47 148.13 0.009202127 0.259147922 0.168770674 1 1 1 0.2 dme-miR-13b-2-5p 7mer-m8 TTTGACG X 16367055 16367061 + X_16367055_16367061_+ 0.523268776 0.435583788 0.479426282 0.062002658 nonA FBtr0340313|FBtr0074232|FBtr0100586 16367010|16367010|16365743 16371525|16368526|16368526 X + 16367036 16367074 5'utr nonA FlyBase G62065.1 CATACATATAAGGATGAGATTTGACGTACTCTCAAATAT 15 16367056 0.694216999 4 15 94 1 1.301029996 0.05 0.333333333 0.5 15 0 0 20 X:16367036-16367074 7 nonA FBtr0340313|FBtr0074232|FBtr0100586 16367010|16367010|16365743 16371525|16368526|16368526 TTTGACG 7mer-m8 dme-miR-13b-2-5p X + 16367000 16367072 stop_codon nonA FlyBase G46876.1 CGACGTTTTTAGACACTGGATCGATCGAACAATATACATACATATAAGGATGAGATTTGACGTACTCTCAAAT 8 16367056 0.969108838 6 8 44 1 1.041392685 0.181818182 0.375 0.545454545 8 0 0 11 X:16367000-16367072 7 10 3336 FBgn0004227 554.3866667 22.83 35.39333333 0.018037952 0.438020149 0.282539085 -1 -1 -1 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT X 16378190 16378196 + X_16378190_16378196_+ 0.658437466 0.562633426 0.610535446 0.067743729 Fur2 FBtr0301300 16377374 16381545 X + 16378168 16378202 3'utr Fur2 FlyBase G62083.1 CAGCCGGGCATCCTGTCCAAGTGGCAGCTGATATT 7 16378189 0.822002147 4 7 32 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 X:16378168-16378202 7 Fur2 FBtr0301300 16377374 16381545 GGCAGCT 7mer-m8 dme-miR-980-3p X + 16378165 16378201 3'utr Fur2 FlyBase G46886.1 AATCAGCCGGGCATCCTGTCCAAGTGGCAGCTGATAT 5 16378189 0.955258602 2 5 23 1 0.954242509 0 0.6 0.777777778 5 0 0 9 X:16378165-16378201 7 5.5 3337 FBgn0004598 1868.423333 38.93666667 59.46333333 0.002943658 0.14125503 0.092493974 1 1 1 0.2 dme-bantam-3p 6mer2-7 GATCTC X 16378849 16378854 + X_16378849_16378854_+ 0.996972342 0.996759763 0.996866052 0.00015026 Fur2 FBtr0301300 16377374 16381545 X + 16378762 16378892 3'utr Fur2 FlyBase G62085.1 TGGCCCTGTCACGACACCTGCGAAACGTGCGCCGGTGCCGGACCCGACAGCTGCCTCACATGTGCTCCGGCCCACCTGCACGTCATCGATCTCGCCGTCTGCCTGCAATTCTGCCCGGACGGATATTTTGA 110 16378847 0.970546132 15 105 603 0.959349593 2.071882007 0.284552846 0.109090909 0.203252033 110 5 0 118 X:16378762-16378892 6 Fur2 FBtr0301300 16377374 16381545 GATCTC 6mer2-7 dme-bantam-3p X + 16378809 16378891 3'utr Fur2 FlyBase G46888.1 CAGCTGCCTCACATGTGCTCCGGCCCACCTGCACGTCATCGATCTCGCCGTCTGCCTGCAATTCTGCCCGGACGGATATTTTG 56 16378846 0.943741831 12 53 310 0.946808511 1.949390007 0.393617021 0.392857143 0.638297872 56 5 0 89 X:16378809-16378891 6 64.5 3338 FBgn0004598 1868.423333 38.93666667 59.46333333 0.034521085 1.656536255 1.084702057 2 3 2.5 0.2 dme-miR-1008-3p 8mer-A1 AGCTGTGA X 16379038 16379045 + X_16379038_16379045_+ 0.595408871 0.509762418 0.552585645 0.060561221 Fur2 FBtr0301300 16377374 16381545 X + 16378985 16379052 3'utr Fur2 FlyBase G62086.1 TTCCCTGCGAGCCCAACTGTGCCTCATGCCAGGACCATCCCGAGTACTGCACTAGCTGTGATCACCAT 15 16379037 0.966416038 7 13 70 0.933333333 0.84509804 0 0 0 15 0 1 14 X:16378985-16379052 8 Fur2 FBtr0301300 16377374 16381545 AGCTGTGA 8mer-A1 dme-miR-1008-3p X + 16379021 16379058 3'utr Fur2 FlyBase G46889.1 ATCCCGAGTACTGCACTAGCTGTGATCACCATTTGGTT 14 16379037 0.781898946 6 14 90 1 1.301029996 0.1 0.428571429 0.6 14 0 0 20 X:16379021-16379058 8 12.5 3339 FBgn0004598 1868.423333 38.93666667 59.46333333 0.006690133 0.321034158 0.210213577 1 1 1 0.2 dme-miR-184-5p 6mer3-8 TGATAA X 16380973 16380978 + X_16380973_16380978_+ 0.999978623 0.530981757 0.76548019 0.331630818 Fur2 FBtr0301300 16377374 16381545 X + 16380943 16381015 3'utr Fur2 FlyBase G62093.1 TAACATTGGCGAGGACGATGATACAGATGGTGATAATTCCGATGACGAGTTGGACGGCAACGTGGGCACAGAT 29 16380970 0.703454166 9 24 148 0.794117647 1.431363764 0.205882353 0.178571429 0.323529412 28 7 0 27 X:16380943-16381015 6 Fur2 FBtr0301300 16377374 16381545 TGATAA 6mer3-8 dme-miR-184-5p X + 16380942 16380990 3'utr Fur2 FlyBase G46892.1 TTAACATTGGCGAGGACGATGATACAGATGGTGATAATTCCGATGACGA 9 16380970 0.740560533 4 7 50 0.818181818 0.653212514 0.272727273 0.111111111 0.272727273 9 1 1 9 X:16380942-16380990 6 12.5 3340 FBgn0004598 1868.423333 38.93666667 59.46333333 0.006690133 0.321034158 0.210213577 3 3 3 0.2 dme-miR-8-3p 7mer-A1 AGTATTA X 16382126 16382132 - X_16382126_16382132_- 0.387730562 0.788510841 0.588120702 0.283394397 CG9992 FBtr0074309|FBtr0074310|FBtr0074307|FBtr0074306|FBtr0074308 16381952|16381952|16381952|16381952|16381952 16382257|16382257|16382257|16382257|16382257 X - 16382091 16382181 3'utr CG9992 FlyBase G68076.1 GATTTTGTATACTTAGCGTACGCAGCTAAATAGGACAGAAGAAGACATAAGTATTAACGAATTTCTAATGATTTACAAGGAAAAACTAACA 17 16382151 0.862998463 8 14 90 0.777777778 0.669006781 0.111111111 0.058823529 0.111111111 17 2 2 14 X:16382091-16382181 7 CG9992 FBtr0074306|FBtr0074308|FBtr0074310|FBtr0074307|FBtr0074309 16381952|16381952|16381952|16381952|16381952 16382257|16382257|16382257|16382257|16382257 AGTATTA 7mer-A1 dme-miR-8-3p X - 16382103 16382173 3'utr CG9992 FlyBase G51244.1 ATACTTAGCGTACGCAGCTAAATAGGACAGAAGAAGACATAAGTATTAACGAATTTCTAATGATTTACAAG 14 16382134 0.967241802 6 11 67 0.894736842 0.929418926 0.105263158 0.214285714 0.421052632 14 1 1 17 X:16382103-16382173 7 8 3341 FBgn0030744 1109.82 99.53333333 152.75 0.007208376 0.080375084 0.052373159 19 2 10.5 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA X 16388000 16388007 + X_16388000_16388007_+ 0.499757847 0.500119451 0.499938649 0.000255761 CG4239 FBtr0340314|FBtr0074268|FBtr0074270|FBtr0074269 16387959|16387959|16387959|16387959 16388702|16388702|16388702|16388702 X + 16387950 16388035 stop_codon CG4239 FlyBase G62102.1 AGAGCAACTAAAACTATTTGTAGTCAGCCCCATCTTCCCCCGGACAAATAGTACTTAACGCTGCCAGCCAAAGCTAACGCCTAAAA 39 16387998 0.958284295 8 35 168 0.925 1.568201724 0.15 0.025641026 0.05 39 3 0 37 X:16387950-16388035 8 CG4239 FBtr0074270|FBtr0074269|FBtr0340314|FBtr0074268 16387959|16387959|16387959|16387959 16388702|16388702|16388702|16388702 GTACTTAA 8mer-A1 dme-miR-252-5p X + 16387972 16388024 3'utr CG4239 FlyBase G46901.1 GTCAGCCCCATCTTCCCCCGGACAAATAGTACTTAACGCTGCCAGCCAAAGCT 17 16387998 0.932983327 6 15 66 0.875 1.322219295 0.166666667 0.294117647 0.5 17 3 0 21 X:16387972-16388024 8 20.5 3342 FBgn0030745 456.7933333 30.29666667 46.16666667 0.044878063 0.676642095 0.444043321 2 2 2 0.2 dme-miR-14-3p 7mer-m8 AAGACTG X 16436783 16436789 + X_16436783_16436789_+ 0.642002726 0.411460279 0.526731503 0.163018094 hang FBtr0074276 16436732 16438454 X + 16436767 16436798 3'utr hang FlyBase G62140.1 CAGCAAGACAAGCAGTAAGACTGTGGCAGCAG 20 16436782 0.843587723 2 18 42 0.863636364 1.278753601 0.545454545 0.1 0.181818182 20 3 0 19 X:16436767-16436798 7 hang FBtr0074276 16436732 16438454 AAGACTG 7mer-m8 dme-miR-14-3p X + 16436758 16436798 3'utr hang FlyBase G46929.1 CAATAATAACAGCAAGACAAGCAGTAAGACTGTGGCAGCAG 16 16436790 0.852672449 3 14 33 0.894736842 1.230448921 0.473684211 0.1875 0.315789474 16 2 0 17 X:16436758-16436798 7 17.5 3343 FBgn0026575 3688.81 55.80333333 85.77333333 0.004744077 0.313601338 0.204026115 1 -7 -3 0.2 dme-miR-33-5p 8mer-A1 CAATGCAA X 16436888 16436895 + X_16436888_16436895_+ 0.556263935 0.528965717 0.542614826 0.019302742 hang FBtr0343571|FBtr0290069|FBtr0074276 16436811|16436811|16436732 16438454|16438454|16438454 X + 16436808 16436927 stop_codon hang FlyBase G62141.1 ATTGAGTGATCATACTCCAACTACAACTCCAACTACCACTACCACTACCAACCACAACTACCAACCACACCTCATCATCTCAATGCAAAATCACTTGAAATGTACAAAGCCAATCCAATC 48 16436908 0.949845876 13 47 206 0.983050847 1.763427994 0.033898305 0.208333333 0.355932203 48 1 0 58 X:16436808-16436927 8 hang FBtr0343571|FBtr0290069|FBtr0074276 16436811|16436811|16436732 16438454|16438454|16438454 CAATGCAA 8mer-A1 dme-miR-33-5p X + 16436801 16436926 stop_codon hang FlyBase G46930.1 GCGACAAATTGAGTGATCATACTCCAACTACAACTCCAACTACCACTACCACTACCAACCACAACTACCAACCACACCTCATCATCTCAATGCAAAATCACTTGAAATGTACAAAGCCAATCCAAT 23 16436908 0.810966884 10 22 96 0.970588235 1.217483944 0 0.347826087 0.558823529 23 0 1 33 X:16436801-16436926 8 14 3344 FBgn0026575 3688.81 55.80333333 85.77333333 0.003795262 0.25088107 0.163220892 -20 -20 -20 0.2 dme-miR-14-3p 6mer3-8 AAGACT X 16437147 16437152 + X_16437147_16437152_+ 0.991412392 0.537312131 0.764362262 0.321097401 hang FBtr0343571|FBtr0290069|FBtr0074276 16436811|16436811|16436732 16438454|16438454|16438454 X + 16437087 16437201 3'utr hang FlyBase G62143.1 AACTTTTTTTTCTTGCTTCTAGTCTTAAGAACTTAAATTACATATATGTACATCATATATAAGACTTTTTTTTTAAATGTTAACCTAGTATGTACCGCGCACACACCCACACACA 73 16437154 0.992570651 18 63 730 0.875 1.146128036 0.010416667 0.273972603 0.447916667 73 7 5 84 X:16437087-16437201 6 hang FBtr0343571|FBtr0290069|FBtr0074276 16436811|16436811|16436732 16438454|16438454|16438454 AAGACT 6mer3-8 dme-miR-14-3p X + 16437076 16437166 3'utr hang FlyBase G46932.1 TTATATAACAAAACTTTTTTTTCTTGCTTCTAGTCTTAAGAACTTAAATTACATATATGTACATCATATATAAGACTTTTTTTTTAAATGT 41 16437154 0.991006703 14 40 432 0.983333333 1.770852012 0.066666667 0.341463415 0.55 41 1 0 59 X:16437076-16437166 6 28 3345 FBgn0026575 3688.81 55.80333333 85.77333333 0.007590524 0.501762141 0.326441785 -7 -7 -7 0.2 dme-miR-1012-3p 6mer2-7 TGACTA X 16445250 16445255 + X_16445250_16445255_+ 0.999693172 0.998243902 0.998968537 0.00102481 rngo FBtr0343349 16444757 16445367 X + 16445212 16445268 3'utr rngo FlyBase G62161.1 TGAAACAAGTAAATACAAAAGAAAAACGAAAGAATGCCTGACTATTAAATAATATTA 13 16445255 0.903037769 5 12 57 0.933333333 1.146128036 0.066666667 0.153846154 0.266666667 13 1 0 14 X:16445212-16445268 6 rngo FBtr0343349 16444757 16445367 TGACTA 6mer2-7 dme-miR-1012-3p X + 16445238 16445268 3'utr rngo FlyBase G46943.1 CGAAAGAATGCCTGACTATTAAATAATATTA 9 16445256 0.762802238 3 6 53 0.769230769 1 0 0.333333333 0.538461538 9 3 0 10 X:16445238-16445268 6 10 3346 FBgn0030753 1218.62 66.64333333 101.9733333 0.008206004 0.150052518 0.098064854 -5 -6 -5.5 0.2 dme-bantam-3p 7mer-A1 GATCTCA X 1649339 1649345 + X_1649339_1649345_+ 0.817744802 0.817932407 0.817838604 0.000132653 br FBtr0070261|FBtr0330406|FBtr0300427|FBtr0300428|FBtr0332293|FBtr0070263 1648712|1649105|1648712|1648712|1648712|1648712 1649378|1649378|1649378|1649378|1649378|1649378 X + 1649280 1649357 3'utr br FlyBase G58005.1 GAAAAAGGAGCAGAGGGAGATTAGGACTATACTACTACCACGTAGACATTTCAATTTCGGATCTCACAGAACGGAAAA 40 1649335 0.974229974 7 39 240 1 1.653212514 0.4 0.125 0.222222222 40 0 0 45 X:1649280-1649357 7 br FBtr0300427|FBtr0070261|FBtr0330406|FBtr0070263|FBtr0300428|FBtr0332293 1648712|1648712|1649105|1648712|1648712|1648712 1649378|1649378|1649378|1649378|1649378|1649378 GATCTCA 7mer-A1 dme-bantam-3p X + 1649282 1649362 3'utr br FlyBase G43884.1 AAAAGGAGCAGAGGGAGATTAGGACTATACTACTACCACGTAGACATTTCAATTTCGGATCTCACAGAACGGAAAATTCAA 33 1649335 0.982257346 8 29 214 0.895833333 1.633468456 0.3125 0.333333333 0.541666667 33 5 0 43 X:1649282-1649362 7 25.5 3347 FBgn0000210 1688.696667 27.97 43.00333333 0.015100403 0.911691098 0.592977289 4 4 4 0.2 dme-bantam-3p 8mer-A1 TGATCTCA X 16543637 16543644 - X_16543637_16543644_- 0.620888497 0.622251463 0.62156998 0.000963787 CG9902 FBtr0074296|FBtr0334035 16543568|16542122 16543682|16543682 X - 16543620 16543672 3'utr CG9902 FlyBase G68143.1 AGTCCCCAGGAGATGTCATAGAAACTAGTGATCTCAAACAGGTCCCCCTAAAT 145 16543644 0.73443773 7 141 637 0.98245614 2.225309282 0.087719298 0.166666667 0.298245614 144 3 0 168 X:16543620-16543672 8 CG9902 FBtr0334035 16542122 16543682 TGATCTCA 8mer-A1 dme-bantam-3p X - 16543581 16543771 stop_codon CG9902 FlyBase G51293.1 TGATCCATGACGCCCTAAAAACTACAAACGTGCCACAGAAGACTCTGGACTTACAGTTCTTGTCCAAGAAGCACATAAGAACTGGATAACAGACCCAGGAGTCCCCAGGAGATGTCATAGAAACTAGTGATCTCAAACAGGTCCCCCTAAATAGCCTGTTCAAAGTAGAGGGACTGGATGCAAGACAGGCG 112 16543644 0.956704622 14 106 480 0.950310559 1.883661435 0.093167702 0.383928571 0.571428571 112 7 1 153 X:16543581-16543771 8 115.5 3348 FBgn0030757 334.18 9.023333333 13.79333333 0.34562212 12.80014777 8.37361044 0 0 0 0.2 dme-miR-276a-3p 6mer2-7 GTTCCT X 16556788 16556793 - X_16556788_16556793_- 0.882295414 0.676530138 0.779412776 0.145498039 Pp2B-14D FBtr0074294|FBtr0309793|FBtr0305593 16556762|16554625|16555464 16557694|16557694|16557694 X - 16556774 16556806 3'utr Pp2B-14D FlyBase G68170.1 ATAGTCCATAAATGTTCCTTATACGAATTAAAC 8 16556794 0.903501627 2 8 62 1 1.113943352 0 0.375 0.615384615 8 0 0 13 X:16556774-16556806 6 Pp2B-14D FBtr0305593|FBtr0309793|FBtr0074294 16555464|16554625|16556762 16557694|16557694|16557694 GTTCCT 6mer2-7 dme-miR-276a-3p X - 16556784 16556832 3'utr Pp2B-14D FlyBase G51313.1 CGAAACCATTTGCAATATGTGCCGCAATAGTCCATAAATGTTCCTTATA 5 16556787 0.984620057 4 5 36 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 X:16556784-16556832 6 5.5 3349 FBgn0011826 681.1066667 22.76 35.00666667 0.008075093 0.241652021 0.157112931 1 -6 -2.5 0.2 dme-miR-932-5p 6mer2-7 GAATTG X 16557616 16557621 - X_16557616_16557621_- 0.927468756 0.779625945 0.853547351 0.104540717 Pp2B-14D FBtr0074294|FBtr0309793|FBtr0305593 16556762|16554625|16555464 16557694|16557694|16557694 X - 16557592 16557658 3'utr Pp2B-14D FlyBase G68175.1 AGATGCAGATGCGGCACGGTGGAGTCTGGCGAGGTCTGAATTGGTCTGAAGGAGGGGCTGAGTGGAG 13 16557618 0.732007478 6 12 71 1 1.113943352 0.461538462 0 0 13 0 0 13 X:16557592-16557658 6 Pp2B-14D FBtr0305593|FBtr0309793|FBtr0074294 16555464|16554625|16556762 16557694|16557694|16557694 GAATTG 6mer2-7 dme-miR-932-5p X - 16557581 16557655 3'utr Pp2B-14D FlyBase G51315.1 TGCAGATGCGGCACGGTGGAGTCTGGCGAGGTCTGAATTGGTCTGAAGGAGGGGCTGAGTGGAGCGGAGCGGAGG 8 16557618 0.954280191 5 8 38 1 1 0.3 0.25 0.4 8 0 0 10 X:16557581-16557655 6 7 3350 FBgn0011826 681.1066667 22.76 35.00666667 0.010277392 0.307557118 0.199961912 -3 -3 -3 0.2 dme-miR-995-5p 6mer3-8 AATTCG X 16595302 16595307 + X_16595302_16595307_+ 0.501256551 0.539015037 0.520135794 0.026699221 Ubc7 FBtr0074283|FBtr0340157 16594808|16594808 16595416|16595867 X + 16595286 16595323 3'utr Ubc7 FlyBase G62184.1 TAGTCATTACACACTTAATTCGACTGATCATTAACTGA 14 16595304 0.70042807 6 14 102 1 1.230448921 0 0.142857143 0.294117647 14 0 0 17 X:16595286-16595323 6 Ubc7 FBtr0074283|FBtr0340157 16594808|16594808 16595416|16595867 AATTCG 6mer3-8 dme-miR-995-5p X + 16595293 16595324 3'utr Ubc7 FlyBase G46962.2 TACACACTTAATTCGACTGATCATTAACTGAA 8 16595304 0.72110378 4 7 47 0.928571429 1.113943352 0 0.375 0.642857143 8 1 0 13 X:16595293-16595324 6 10 3351 FBgn0267384 316.29 26.46 40.41666667 0.031616554 0.377928949 0.24742268 -2 -2 -2 0.2 dme-miR-317-5p 6mer2-7 TATCCC X 1659883 1659888 + X_1659883_1659888_+ 0.8096297 0.898057968 0.853843834 0.062528251 br FBtr0070265|FBtr0303562 1659601|1654641 1664869|1664869 X + 1659844 1659888 3'utr br FlyBase G58011.1 ATATTAGGCATATTTTGGCGTCAACTGTTTTATTACTCTTATCCC 15 1659876 0.850632795 5 12 156 0.866666667 1.113943352 0 0 0 15 2 0 13 X:1659844-1659888 6 br FBtr0070265|FBtr0303562 1659601|1654641 1664869|1664869 TATCCC 6mer2-7 dme-miR-317-5p X + 1659850 1659883 3'utr br FlyBase G43888.1 GGCATATTTTGGCGTCAACTGTTTTATTACTCTT 9 1659876 0.91975619 4 7 80 0.818181818 0.954242509 0.090909091 0.222222222 0.363636364 9 2 0 9 X:1659850-1659883 1 5 3352 FBgn0000210 1688.696667 27.97 43.00333333 0.002960863 0.17876296 0.116270057 7 7 7 0.2 dme-miR-980-3p 6mer3-8 GGCAGC X 16609165 16609170 + X_16609165_16609170_+ 0.988732006 0.99922916 0.993980583 0.007422641 Nup153 FBtr0074284|FBtr0340158|FBtr0299587 16609097|16609097|16609097 16610459|16610459|16610459 X + 16609106 16609184 3'utr Nup153 FlyBase G62212.1 ATCGCAGTCGGCCATCACGATAGCAAATGAGGCCGCCGTCGGATTAGGATTAAGATATTGGCAGCCATTGCCGAGAGTA 15 16609164 0.994684754 6 14 66 1 1.146128036 0.142857143 0 0 14 0 0 14 X:16609106-16609184 6 Nup153 FBtr0299587|FBtr0074284|FBtr0340158 16609097|16609097|16609097 16610459|16610459|16610459 GGCAGC 6mer3-8 dme-miR-980-3p X + 16609127 16609181 3'utr Nup153 FlyBase G46977.1 AGCAAATGAGGCCGCCGTCGGATTAGGATTAAGATATTGGCAGCCATTGCCGAGA 6 16609164 0.948960344 3 5 25 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 X:16609127-16609181 6 5.5 3353 FBgn0061200 3129.656667 47.90333333 73.78666667 0.001757381 0.114814557 0.074539212 1 1 1 0.2 dme-miR-2a-2-5p 6mer3-8 TGATGA X 16609733 16609738 + X_16609733_16609738_+ 0.946542449 0.845184677 0.895863563 0.071670717 Nup153 FBtr0074284|FBtr0340158|FBtr0299587 16609097|16609097|16609097 16610459|16610459|16610459 X + 16609719 16609754 3'utr Nup153 FlyBase G62214.1 CATACTACGCATATTGATGATTACAAATTATAAAAA 8 16609733 0.670631461 4 8 54 1 0.954242509 0 0.125 0.222222222 8 0 0 9 X:16609719-16609754 6 Nup153 FBtr0299587|FBtr0074284|FBtr0340158 16609097|16609097|16609097 16610459|16610459|16610459 TGATGA 6mer3-8 dme-miR-2a-2-5p X + 16609722 16609751 3'utr Nup153 FlyBase G46978.1 ACTACGCATATTGATGATTACAAATTATAA 5 16609733 0.638750851 4 5 35 1 0.954242509 0 0.6 0.777777778 5 0 0 9 X:16609722-16609751 6 6.5 3354 FBgn0061200 3129.656667 47.90333333 73.78666667 0.002076905 0.135689931 0.088091796 0 0 0 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT X 16614135 16614141 + X_16614135_16614141_+ 0.658908311 0.65890185 0.658905081 4.53E-06 mbt FBtr0074285 16614013 16614856 X + 16613967 16614180 stop_codon mbt FlyBase G62229.1 CCGTCGCTGCTGGTTCCGCTGATGCGCAATGCGCGACACCATCCGTAGTTGGATGCCACTGGACAACCCAGACGATCCGGCTGCTCGATGAAAGCAATCATTCCCACAGACAACGGATCCCGGCCCGTGGGCATCCATCTATTAAATTCTAGTATTAACATTCAGTTTGGCAGCTGTACTTAAATCCCCGGAGAATCCTCGAAACGTTGTAAAG 633 16614133 0.953262788 26 615 5004 0.970914127 2.146748014 0.159279778 0.129541864 0.236842105 633 17 4 701 X:16613967-16614180 7 mbt FBtr0074285 16614013 16614856 GGCAGCT 7mer-m8 dme-miR-980-3p X + 16614110 16614168 3'utr mbt FlyBase G46987.1 AAATTCTAGTATTAACATTCAGTTTGGCAGCTGTACTTAAATCCCCGGAGAATCCTCGA 455 16614133 0.737649622 10 444 3565 0.979885057 2.231724383 0.139367816 0.384615385 0.597701149 455 11 3 682 X:16614110-16614168 7 529 3355 FBgn0025743 524.9733333 19.44666667 29.74666667 1.007670231 27.20260542 17.78350515 2 2 2 0.2 dme-miR-277-3p 7mer-A1 GCATTTA X 16614318 16614324 + X_16614318_16614324_+ 0.823333336 0.787424632 0.805378984 0.025391285 mbt FBtr0074285 16614013 16614856 X + 16614299 16614334 3'utr mbt FlyBase G62231.1 CGGATGGAGAAACGATATAGCATTTATCTGCCCGAG 7 16614316 0.684407251 4 7 41 1 1.079181246 0.25 0.571428571 0.75 7 0 0 12 X:16614299-16614334 7 mbt FBtr0074285 16614013 16614856 GCATTTA 7mer-A1 dme-miR-277-3p X + 16614283 16614338 3'utr mbt FlyBase G46988.1 CATCCTGCAACCGATACGGATGGAGAAACGATATAGCATTTATCTGCCCGAGAACC 6 16614326 0.965924525 4 5 27 0.714285714 0.698970004 0.285714286 0.166666667 0.285714286 6 2 0 5 X:16614283-16614338 7 5.5 3356 FBgn0025743 524.9733333 19.44666667 29.74666667 0.010476723 0.28282482 0.184894666 2 -8 -3 0.2 dme-miR-2a-2-5p 6mer3-8 TGATGA X 16624331 16624336 - X_16624331_16624336_- 0.997864526 0.993778411 0.995821468 0.002889309 Rok FBtr0074286|FBtr0340151 16624209|16624209 16626162|16626162 X - 16624297 16624346 3'utr Rok FlyBase G68217.1 ACTATTATTATGATGATCATTCGTATTACGTTTATGTTTAATTGTACTCT 12 16624336 0.990467617 5 11 125 1 1.176091259 0 0.166666667 0.333333333 12 0 0 15 X:16624297-16624346 6 Rok FBtr0074286|FBtr0340151 16624209|16624209 16626162|16626162 TGATGA 6mer3-8 dme-miR-2a-2-5p X - 16624319 16624346 3'utr Rok FlyBase G51339.1 ACTATTATTATGATGATCATTCGTATTA 11 16624336 0.752953059 2 10 104 0.9375 1.176091259 0 0.272727273 0.5 11 1 0 15 X:16624319-16624346 6 10.5 3357 FBgn0026181 1648.443333 28.48333333 43.82 0.006369646 0.36863663 0.239616613 0 0 0 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA X 16624512 16624519 - X_16624512_16624519_- 0.480795014 0.482751403 0.481773209 0.001383384 Rok FBtr0074286|FBtr0340151 16624209|16624209 16626162|16626162 X - 16624492 16624566 3'utr Rok FlyBase G68218.1 GTTTTACAGAGCAGAGTGTATGTACAGAGTGAGAGGCGCCAGCGGATTGCATTTAAAAGTAACAATAATAGCGAA 193 16624520 0.910514222 4 190 915 0.995391705 2.033423755 0.400921659 0.10880829 0.207373272 193 0 1 216 X:16624492-16624566 8 Rok FBtr0074286|FBtr0340151 16624209|16624209 16626162|16626162 TGCATTTA 8mer-A1 dme-miR-277-3p X - 16624496 16624561 3'utr Rok FlyBase G51340.1 ACAGAGCAGAGTGTATGTACAGAGTGAGAGGCGCCAGCGGATTGCATTTAAAAGTAACAATAATAG 117 16624520 0.907027154 5 116 560 0.98757764 1.72427587 0.341614907 0.324786325 0.50931677 117 0 2 159 X:16624496-16624561 8 149 3358 FBgn0026181 1648.443333 28.48333333 43.82 0.090388306 5.231129315 3.400273848 1 1 1 0.2 dme-miR-33-5p 8mer-A1 CAATGCAA X 16625779 16625786 - X_16625779_16625786_- 0.619846784 0.531250921 0.575548852 0.062646762 Rok FBtr0340153|FBtr0074286|FBtr0340151 16625107|16624209|16624209 16626162|16626162|16626162 X - 16625767 16625810 3'utr Rok FlyBase G68225.1 TGTATCTTAAAGAACATGTAATGCCAATGCAACTCGTTTAACGC 26 16625789 0.827796051 6 24 150 0.933333333 1.146128036 0.066666667 0.115384615 0.233333333 26 1 1 28 X:16625767-16625810 8 Rok FBtr0074286|FBtr0340151|FBtr0340153 16624209|16624209|16625107 16626162|16626162|16626162 CAATGCAA 8mer-A1 dme-miR-33-5p X - 16625758 16625815 3'utr Rok FlyBase G51347.1 AAAGCTGTATCTTAAAGAACATGTAATGCCAATGCAACTCGTTTAACGCTTACCTAAC 19 16625789 0.964536286 3 18 102 1 1.531478917 0.382352941 0.421052632 0.676470588 19 0 0 34 X:16625758-16625815 8 21 3359 FBgn0026181 1648.443333 28.48333333 43.82 0.012739291 0.737273259 0.479233227 3 3 3 0.2 dme-miR-980-3p 6mer2-7 GCAGCT X 16626085 16626090 - X_16626085_16626090_- 0.627552494 0.84357356 0.735563027 0.152749985 Rok FBtr0340153|FBtr0074286|FBtr0340151 16625107|16624209|16624209 16626162|16626162|16626162 X - 16626054 16626113 3'utr Rok FlyBase G68227.1 TGCCAGATCGCAGGCGTGGCAATGCAGCTTGAGCCGGAGCAGTCGCGACTCTCCAGCCCC 80 16626084 0.728811412 4 73 263 0.923076923 1.225309282 0.285714286 0.1375 0.241758242 80 3 4 84 X:16626054-16626113 6 Rok FBtr0074286|FBtr0340151|FBtr0340153 16624209|16624209|16625107 16626162|16626162|16626162 GCAGCT 6mer2-7 dme-miR-980-3p X - 16626064 16626113 3'utr Rok FlyBase G51349.1 TGCCAGATCGCAGGCGTGGCAATGCAGCTTGAGCCGGAGCAGTCGCGACT 52 16626084 0.709587782 4 50 164 0.964285714 1.306425028 0.345238095 0.403846154 0.630952381 52 0 3 81 X:16626064-16626113 6 64.5 3360 FBgn0026181 1648.443333 28.48333333 43.82 0.039127824 2.264482153 1.471930625 -6 -6 -6 0.2 dme-bantam-3p 6mer3-8 TGATCT X 1662652 1662657 + X_1662652_1662657_+ 0.59671959 0.773940217 0.685329904 0.125313888 br FBtr0070265|FBtr0303562 1659601|1654641 1664869|1664869 X + 1662617 1662671 3'utr br FlyBase G58016.1 GAAAACGAAAAATAATGCAAATGCAAAACAAACTGTGATCTTACAAGTTTTTGAA 37 1662657 0.956516728 5 34 175 0.93877551 1.361727836 0 0.216216216 0.408163265 37 2 1 46 X:1662617-1662671 6 br FBtr0070265|FBtr0303562 1659601|1654641 1664869|1664869 TGATCT 6mer3-8 dme-bantam-3p X + 1662634 1662660 3'utr br FlyBase G43891.1 CAAATGCAAAACAAACTGTGATCTTAC 19 1662657 0.698437328 4 18 87 0.96 1.380211242 0 0.157894737 0.36 19 1 0 24 X:1662634-1662660 6 26.5 3361 FBgn0000210 1688.696667 27.97 43.00333333 0.015692576 0.94744369 0.6162313 -5 -5 -5 0.2 dme-miR-8-3p 8mer-A1 CAGTATTA X 1674224 1674231 - X_1674224_1674231_- 0.671328462 0.6713883 0.671358381 4.23E-05 CG32809 FBtr0308321|FBtr0333117|FBtr0333120|FBtr0333118|FBtr0308323|FBtr0333119|FBtr0308324 1673336|1673108|1673336|1673336|1673336|1673336|1673336 1675880|1675880|1675880|1677054|1675880|1675880|1677238 X - 1674202 1674267 3'utr CG32809 FlyBase G64043.1 ATTTGTTAACCTTACTGCCCGGCCAGTATTAGACTTCAGTATTATAGGCTAATTTACATTTAAATA 41 1674232 0.884651353 10 37 364 0.93877551 1.662757832 0.142857143 0.146341463 0.285714286 41 3 0 46 X:1674202-1674267 8 CG32809 FBtr0333120|FBtr0333117|FBtr0308321|FBtr0308324|FBtr0333119|FBtr0308323|FBtr0333118 1673336|1673108|1673336|1673336|1673336|1673336|1673336 1675880|1675880|1675880|1677238|1675880|1675880|1677054 CAGTATTA 8mer-A1 dme-miR-8-3p X - 1674179 1674282 3'utr CG32809 FlyBase G48272.1 CGTGCACACACATAGATTTGTTAACCTTACTGCCCGGCCAGTATTAGACTTCAGTATTATAGGCTAATTTACATTTAAATAAACTTGTAACACACGACTTGAGA 28 1674232 0.990554333 13 23 235 0.863636364 1.278753601 0.25 0.392857143 0.613636364 28 5 1 38 X:1674179-1674282 8 25 3362 FBgn0023531 281.8933333 6.233333333 9.576666667 0.088686028 4.010695187 2.61051166 1 1 1 0.2 dme-miR-14-3p 7mer-A1 AGACTGA X 1674797 1674803 - X_1674797_1674803_- 0.534750266 0.546998491 0.540874379 0.008660785 CG32809 FBtr0308321|FBtr0333117|FBtr0333120|FBtr0333118|FBtr0308323|FBtr0333119|FBtr0308324 1673336|1673108|1673336|1673336|1673336|1673336|1673336 1675880|1675880|1675880|1677054|1675880|1675880|1677238 X - 1674770 1674827 3'utr CG32809 FlyBase G64044.1 ATTATTACCTTGGTATGGGACGTGAGACTGATAGTTCTATATATGTAGCTCATCAAGA 150 1674805 0.963442001 9 148 1182 0.993975904 2.217483944 0.409638554 0.093333333 0.180722892 150 1 0 165 X:1674770-1674827 7 CG32809 FBtr0333120|FBtr0333117|FBtr0308321|FBtr0308324|FBtr0333119|FBtr0308323|FBtr0333118 1673336|1673108|1673336|1673336|1673336|1673336|1673336 1675880|1675880|1675880|1677238|1675880|1675880|1677054 AGACTGA 7mer-A1 dme-miR-14-3p X - 1674779 1674826 3'utr CG32809 FlyBase G48273.1 TTATTACCTTGGTATGGGACGTGAGACTGATAGTTCTATATATGTAGC 102 1674805 0.957475816 6 95 848 0.90625 1.860338007 0.4375 0.421568627 0.63125 102 14 1 145 X:1674779-1674826 7 124.5 3363 FBgn0023531 281.8933333 6.233333333 9.576666667 0.441656419 19.97326203 13.00034807 2 2 2 0.2 dme-miR-282-5p 8mer-A1 AGAGGCTA X 16785427 16785434 - X_16785427_16785434_- 0.622468871 0.609728134 0.616098502 0.009009106 CG9609 FBtr0074356 16785113 16785478 X - 16785376 16785460 3'utr CG9609 FlyBase G68258.1 GGGACGGGAGTGAGAAGGTCTGGTCAAGAGGCTAACAATTGAATGACTACTTTAATTTAAACCACAACTTCTAAAAGAGAAACAA 28 16785438 0.967379161 10 26 140 0.933333333 1.447158031 0.366666667 0.035714286 0.1 28 2 0 28 X:16785376-16785460 8 CG9609 FBtr0074356 16785113 16785478 AGAGGCTA 8mer-A1 dme-miR-282-5p X - 16785390 16785456 3'utr CG9609 FlyBase G51372.1 CGGGAGTGAGAAGGTCTGGTCAAGAGGCTAACAATTGAATGACTACTTTAATTTAAACCACAACTTC 18 16785439 0.959681276 7 16 87 0.92 1.361727836 0.6 0.222222222 0.44 18 2 0 23 X:16785390-16785456 8 17.5 3364 FBgn0030787 206.1233333 13.74333333 21.09 0.084900626 1.273344652 0.829777146 4 5 4.5 0.2 dme-miR-14-3p 7mer-A1 AGACTGA X 16789595 16789601 + X_16789595_16789601_+ 0.821457908 0.822097905 0.821777906 0.000452548 Sap30 FBtr0074331|FBtr0344089 16788694|16788694 16789644|16789644 X + 16789562 16789616 3'utr Sap30 FlyBase G62279.1 GAATTACGCATTAAACGATTTATGTTAAAGCCTAGACTGATTTTAGCCATACATA 29 16789603 0.979262646 8 29 200 1 1.544068044 0.2 0.172413793 0.314285714 29 0 0 35 X:16789562-16789616 7 Sap30 FBtr0344089|FBtr0074331 16788694|16788694 16789644|16789644 AGACTGA 7mer-A1 dme-miR-14-3p X + 16789550 16789617 3'utr Sap30 FlyBase G47024.1 ACAAATCAATTGGAATTACGCATTAAACGATTTATGTTAAAGCCTAGACTGATTTTAGCCATACATAT 22 16789602 0.9864013 6 18 148 0.8125 0.937852093 0.09375 0.318181818 0.53125 22 4 2 26 X:16789550-16789617 7 24.5 3365 FBgn0030788 191.5866667 13.93666667 21.27333333 0.127879463 1.757952643 1.15167659 -8 -7 -7.5 0.2 dme-miR-1008-3p 7mer-m8 AGCTGTG X 16795818 16795824 + X_16795818_16795824_+ 0.568013437 0.63452462 0.601269028 0.047030521 CG4768 FBtr0074332|FBtr0347029|FBtr0305899 16795317|16795317|16795317 16796023|16797742|16796756 X + 16795702 16795875 3'utr CG4768 FlyBase G62289.1 AAGATGTTTATGTTATAAGGATAATGCCGATGGTGGGCACAAACTGTTAATCATTGTCATCATGCATTAATGCGAACGGAGTGAAAAGCTTAGGAGTACGATATCTGTTATATGCCAGCTGTGCGTCTGATTTACGATTACGATTAAGCGAAGCAGTAATAGTGAATGGTATTG 46 16795821 0.98572663 19 44 352 0.961538462 1.698970004 0.134615385 0.130434783 0.230769231 46 2 0 50 X:16795702-16795875 7 CG4768 FBtr0305899|FBtr0074332|FBtr0347029 16795317|16795317|16795317 16796756|16796023|16797742 AGCTGTG 7mer-m8 dme-miR-1008-3p X + 16795656 16795834 3'utr CG4768 FlyBase G47029.1 TTGATAGCACTTAAGAAAAAAGTCATGTCGATTGTAATGACACCAGAAGATGTTTATGTTATAAGGATAATGCCGATGGTGGGCACAAACTGTTAATCATTGTCATCATGCATTAATGCGAACGGAGTGAAAAGCTTAGGAGTACGATATCTGTTATATGCCAGCTGTGCGTCTGATTT 38 16795822 0.986139149 16 35 286 0.93220339 1.263241435 0.050847458 0.447368421 0.644067797 38 2 2 55 X:16795656-16795834 7 25.5 3366 FBgn0030790 591.9266667 27.66333333 42.73 0.043079661 0.921797807 0.596770419 -3 -4 -3.5 0.2 dme-miR-1008-3p 7mer-m8 AGCTGTG X 16795949 16795955 + X_16795949_16795955_+ 0.671245911 0.665952228 0.668599069 0.003743211 CG4768 FBtr0074332|FBtr0347029|FBtr0305899 16795317|16795317|16795317 16796023|16797742|16796756 X + 16795923 16795970 3'utr CG4768 FlyBase G62290.1 TTTTGCATTATGCAAACGACAAATGAAGCTGTGTAAATAACAACAAAA 48 16795946 0.875741007 4 44 204 0.945454545 1.238882089 0 0.125 0.236363636 48 1 2 52 X:16795923-16795970 7 CG4768 FBtr0305899|FBtr0074332|FBtr0347029 16795317|16795317|16795317 16796756|16796023|16797742 AGCTGTG 7mer-m8 dme-miR-1008-3p X + 16795923 16795970 3'utr CG4768 FlyBase G47031.1 TTTTGCATTATGCAAACGACAAATGAAGCTGTGTAAATAACAACAAAA 31 16795946 0.909399037 4 29 134 0.968253968 1.484299839 0.015873016 0.548387097 0.777777778 31 1 1 61 X:16795923-16795970 7 38 3367 FBgn0030790 591.9266667 27.66333333 42.73 0.064197142 1.373659477 0.889304938 3 3 3 0.2 dme-miR-307a-3p 6mer3-8 GGTTGT X 16798265 16798270 - X_16798265_16798270_- 0.68816874 0.997773852 0.842971296 0.218923936 CG9132 FBtr0074353|FBtr0074354|FBtr0306801 16796900|16797514|16797514 16798632|16798632|16798632 X - 16798250 16798359 3'utr CG9132 FlyBase G68271.1 CGTAGTTGCATCTCGCTCTAATTGAAGGAGTACGATGAGCGTGGGCAGAGTTCTCAGTGGGCGGGGATCTGTAGCGAACTATTTAGCCTGGTTGTTAATTGTATAAGTCA 38 16798277 0.935865827 13 31 257 0.829268293 1.230448921 0.390243902 0.078947368 0.146341463 38 6 1 34 X:16798250-16798359 6 CG9132 FBtr0306801|FBtr0074353|FBtr0074354 16797514|16796900|16797514 16798632|16798632|16798632 GGTTGT 6mer3-8 dme-miR-307a-3p X - 16798251 16798290 3'utr CG9132 FlyBase G51377.1 TGTAGCGAACTATTTAGCCTGGTTGTTAATTGTATAAGTC 13 16798271 0.77572534 5 13 126 1 1.301029996 0.05 0.384615385 0.6 13 0 0 20 X:16798251-16798290 6 14 3368 FBgn0030791 552.37 33.83666667 51.63333333 0.02534533 0.41375234 0.271142673 7 1 4 0.2 dme-miR-276a-3p 6mer2-7 GTTCCT X 16798613 16798618 - X_16798613_16798618_- 0.976770286 0.999983733 0.988377009 0.016414353 CG9132 FBtr0074353|FBtr0074354|FBtr0306801 16796900|16797514|16797514 16798632|16798632|16798632 X - 16798560 16798628 3'utr CG9132 FlyBase G68273.1 ACATCATCCTGTTCCTCCTGCTGCTGCTGCTGCTGCGCTCCTATCACCCAGAACTTTATGTTTTAAGAC 19 16798619 0.765540447 8 17 152 0.888888889 0.903089987 0.074074074 0.315789474 0.518518519 19 1 2 24 X:16798560-16798628 6 CG9132 FBtr0306801|FBtr0074353|FBtr0074354 16797514|16796900|16797514 16798632|16798632|16798632 GTTCCT 6mer2-7 dme-miR-276a-3p X - 16798583 16798635 stop_codon CG9132 FlyBase G51379.1 TAGATATACATCATCCTGTTCCTCCTGCTGCTGCTGCTGCTGCGCTCCTATCA 7 16798621 0.91438085 5 6 48 0.777777778 0.84509804 0.222222222 0.285714286 0.444444444 7 2 0 7 X:16798583-16798635 6 8 3369 FBgn0030791 552.37 33.83666667 51.63333333 0.014483046 0.236429908 0.15493867 1 3 2 0.2 dme-miR-304-5p 8mer-A1 TGAGATTA X 16826266 16826273 + X_16826266_16826273_+ 0.60355342 0.588275654 0.595914537 0.010802965 CG4829 FBtr0335278|FBtr0112994|FBtr0074336|FBtr0112995|FBtr0074338|FBtr0074337 16826137|16826137|16826137|16826137|16826137|16826137 16826494|16826494|16826494|16826494|16826494|16826494 X + 16826242 16826291 3'utr CG4829 FlyBase G62306.1 CACACACGCACGGAAACATTGCATTGAGATTAGAGTAGAACTGCCCGAAA 27 16826265 0.971224266 5 27 157 1 1.431363764 0.444444444 0 0 27 0 0 27 X:16826242-16826291 8 CG4829 FBtr0074338|FBtr0074337|FBtr0074336|FBtr0112995|FBtr0335278|FBtr0112994 16826137|16826137|16826137|16826137|16826137|16826137 16826494|16826494|16826494|16826494|16826494|16826494 TGAGATTA 8mer-A1 dme-miR-304-5p X + 16826241 16826285 3'utr CG4829 FlyBase G47043.1 ACACACACGCACGGAAACATTGCATTGAGATTAGAGTAGAACTGC 21 16826265 0.968202391 4 21 117 1 1.579783597 0.394736842 0.571428571 0.763157895 21 0 0 38 X:16826241-16826285 8 24 3370 FBgn0030796 2560.61 104.38 159.97 0.009372767 0.229929105 0.15002813 1 1 1 0.2 dme-miR-304-5p 6mer2-7 GAGATT X 16827323 16827328 - X_16827323_16827328_- 0.950519275 0.959428227 0.954973751 0.006299544 CG13004 FBtr0112996|FBtr0308682|FBtr0074351 16826679|16826679|16826679 16827398|16827398|16827398 X - 16827252 16827391 3'utr CG13004 FlyBase G68283.1 GTGGTGGCGAGGGAGGGAGTTGAATGGAACTAATGGAGCAGTAGATGGAGGAGAGAGAATTAAGAGATTTTTTCCCAACTGGCAGCGCAACGGATTTCTGTACTTGACCCACTTAAAATAACCATATGCAAAAAAAACTG 633 16827321 0.983165853 23 560 4273 0.882014388 1.833217965 0.381294964 0.088467615 0.169784173 633 74 8 613 X:16827252-16827391 6 CG13004 FBtr0112996|FBtr0074351|FBtr0308682|FBtr0304152 16826679|16826679|16826679|16827115 16827398|16827398|16827398|16827398 GAGATT 6mer2-7 dme-miR-304-5p X - 16827224 16827389 3'utr CG13004 FlyBase G51388.1 GGTGGCGAGGGAGGGAGTTGAATGGAACTAATGGAGCAGTAGATGGAGGAGAGAGAATTAAGAGATTTTTTCCCAACTGGCAGCGCAACGGATTTCTGTACTTGACCCACTTAAAATAACCATATGCAAAAAAAACTGTAACAACGACATCGATAAGTGGTGTTCT 394 16827321 0.980725651 21 350 2543 0.881602914 1.906694111 0.43715847 0.314720812 0.508196721 394 60 5 484 X:16827224-16827389 6 394.5 3371 FBgn0030797 333.0633333 17.96666667 27.55 1.184459412 21.95732839 14.31941924 -7 -7 -7 0.2 dme-miR-999-3p 8mer-A1 AGTTAACA X 16885831 16885838 + X_16885831_16885838_+ 0.534207424 0.601384923 0.567796174 0.047501666 Rcp FBtr0074341 16885515 16885859 X + 16885804 16885846 3'utr Rcp FlyBase G62309.1 GGAACAGACAGGGAATGTATTATGCTTAGTTAACAATAAAGCT 11 16885823 0.98298179 2 11 86 1 1.041392685 0 0 0 11 0 0 11 X:16885804-16885846 8 Rcp FBtr0074341 16885515 16885859 AGTTAACA 8mer-A1 dme-miR-999-3p X + 16885802 16885839 3'utr Rcp FlyBase G47046.1 CTGGAACAGACAGGGAATGTATTATGCTTAGTTAACAA 6 16885823 0.983245378 3 6 46 1 1.079181246 0 0.833333333 0.916666667 6 0 0 12 X:16885802-16885839 8 7.5 3372 FBgn0030801 124.5266667 14.28333333 21.93 0.060228064 0.525087515 0.341997264 8 8 8 0.2 dme-miR-184-5p 6mer3-8 TGATAA X 16888280 16888285 + X_16888280_16888285_+ 0.668995754 0.999976142 0.834485948 0.234038415 CG4880 FBtr0074342|FBtr0310519 16888233|16888233 16888729|16888597 X + 16888251 16888289 3'utr CG4880 FlyBase G62315.1 ACGTTTTAGACAATTCTGCAAACCAGTCGTGATAAATTT 12 16888277 0.968174902 5 11 67 0.846153846 1.041392685 0 0.083333333 0.153846154 12 2 0 11 X:16888251-16888289 6 CG4880 FBtr0074342|FBtr0310519 16888233|16888233 16888729|16888597 TGATAA 6mer3-8 dme-miR-184-5p X + 16888251 16888290 3'utr CG4880 FlyBase G47049.1 ACGTTTTAGACAATTCTGCAAACCAGTCGTGATAAATTTA 8 16888278 0.781788114 5 8 58 1 1.146128036 0 0.5 0.714285714 8 0 0 14 X:16888251-16888290 6 9 3373 FBgn0030803 567.3333333 44.24666667 68.27666667 0.01586369 0.203405153 0.131816628 3 2 2.5 0.2 dme-miR-317-3p 6mer3-8 TGTGTT X 16937154 16937159 + X_16937154_16937159_+ 0.999276751 0.999828108 0.999552429 0.000389828 CG4928 FBtr0074345|FBtr0074344 16936676|16936676 16938209|16937411 X + 16937144 16937178 5'utr CG4928 FlyBase G62329.1 AAATCCTTTGTGTGTTAGTCTAGGTGTAAGCACAC 5 16937157 0.720739342 3 4 41 1 0.84509804 0.285714286 0.2 0.428571429 5 0 0 7 X:16937144-16937178 6 CG4928 FBtr0074345|FBtr0074344 16936676|16936676 16938209|16937411 TGTGTT 6mer3-8 dme-miR-317-3p X + 16937141 16937171 5'utr CG4928 FlyBase G47056.1 TGCAAATCCTTTGTGTGTTAGTCTAGGTGTA 5 16937156 0.630679204 4 4 42 0.833333333 0.698970004 0.833333333 0.2 0.333333333 5 1 0 5 X:16937141-16937171 6 4 3374 FBgn0027556 126.41 4.513333333 6.916666667 0.031643066 0.886262925 0.578313253 -3 -2 -2.5 0.2 dme-miR-1003-3p 7mer-A1 TGTGAGA X 16938168 16938174 + X_16938168_16938174_+ 0.783772085 0.775722449 0.779747267 0.005691997 CG4928 FBtr0074345 16936676 16938209 X + 16938138 16938185 3'utr CG4928 FlyBase G62332.1 AATGGAAAAAATACACGCACATAACAAATTTGTGAGAAAAAAAATTAC 13 16938167 0.948106588 4 12 48 0.9375 1.176091259 0 0.230769231 0.375 13 1 0 15 X:16938138-16938185 7 CG4928 FBtr0074345 16936676 16938209 TGTGAGA 7mer-A1 dme-miR-1003-3p X + 16938152 16938183 3'utr CG4928 FlyBase G47058.1 ACGCACATAACAAATTTGTGAGAAAAAAAATT 12 16938166 0.919781942 2 12 49 1 1.278753601 0 0.333333333 0.578947368 12 0 0 19 X:16938152-16938183 7 11.5 3375 FBgn0027556 126.41 4.513333333 6.916666667 0.090973815 2.548005908 1.662650602 1 2 1.5 0.2 dme-miR-14-3p 7mer-m8 AAGACTG X 16938531 16938537 - X_16938531_16938537_- 0.668507581 0.662532164 0.665519872 0.004225246 wus FBtr0074418|FBtr0342974 16938494|16938242 16938752|16938752 X - 16938506 16938593 3'utr wus FlyBase G68308.1 TAGCTGTATCTGTTTCCACATGTATTTATTACCATAAATCTGCGTTGTTTATTGTCAAGACTGTGTTTAAAAATATTAAAGCACCCCA 7 16938555 0.986654004 5 7 73 1 1 0.1 0.285714286 0.5 7 0 0 10 X:16938506-16938593 7 wus FBtr0074418|FBtr0342974 16938494|16938242 16938752|16938752 AAGACTG 7mer-m8 dme-miR-14-3p X - 16938523 16938555 3'utr wus FlyBase G51402.1 TCTGCGTTGTTTATTGTCAAGACTGTGTTTAAA 5 16938530 0.805695826 2 5 48 1 0.698970004 0.2 0 0 5 0 0 5 X:16938523-16938555 7 4 3376 FBgn0030805 139 7.906666667 12.04333333 0.028776978 0.505902192 0.332133961 18 -7 5.5 0.2 dme-miR-277-3p 7mer-m8 TGCATTT X 16955511 16955517 + X_16955511_16955517_+ 0.620155734 0.620143838 0.620149786 8.41E-06 RhoGAP15B FBtr0110990|FBtr0290096 16955463|16955463 16955995|16956234 X + 16955459 16955572 stop_codon RhoGAP15B FlyBase G62359.1 AAGTAGAAGTGCCCTCTCCCAGCTGCCAAACATAGATTTAACCGCCGTCTTGTGCATTTTTCTGTAGATATTCTGAATTTATTCGCAATATTAGGGAATATATACGTTTAGCAA 51 16955508 0.901497505 19 49 495 0.952380952 1.77815125 0.238095238 0.176470588 0.333333333 51 3 0 60 X:16955459-16955572 7 RhoGAP15B FBtr0290096|FBtr0110990 16955463|16955463 16956234|16955995 TGCATTT 7mer-m8 dme-miR-277-3p X + 16955464 16955600 3'utr RhoGAP15B FlyBase G47072.1 GAAGTGCCCTCTCCCAGCTGCCAAACATAGATTTAACCGCCGTCTTGTGCATTTTTCTGTAGATATTCTGAATTTATTCGCAATATTAGGGAATATATACGTTTAGCAATATTTTTACGAACAATTTCGGGAATTTT 36 16955508 0.989428055 14 32 353 0.927272727 1.40654018 0.145454545 0.416666667 0.618181818 36 3 1 51 X:16955464-16955600 7 31.5 3377 FBgn0030808 1485.72 31.16 47.79666667 0.021201842 1.010911425 0.659041774 3 3 3 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 16955677 16955682 + X_16955677_16955682_+ 0.999994714 0.99868026 0.999337487 0.000929421 RhoGAP15B FBtr0110990|FBtr0290096 16955463|16955463 16955995|16956234 X + 16955657 16955694 3'utr RhoGAP15B FlyBase G62360.1 ATAATCACGTTTGATCAAATACCAAATTGTACATAAGC 15 16955684 0.62908066 5 14 92 0.941176471 1.204119983 0.058823529 0.133333333 0.235294118 15 1 0 16 X:16955657-16955694 6 RhoGAP15B FBtr0290096|FBtr0110990 16955463|16955463 16956234|16955995 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 16955648 16955697 3'utr RhoGAP15B FlyBase G47073.1 TTTCTGTAAATAATCACGTTTGATCAAATACCAAATTGTACATAAGCTTA 10 16955684 0.981726887 5 10 74 1 1.255272505 0.055555556 0.6 0.777777778 10 0 0 18 X:16955648-16955697 6 12.5 3378 FBgn0030808 1485.72 31.16 47.79666667 0.008413429 0.401155327 0.261524514 -7 -7 -7 0.2 dme-miR-190-5p 8mer-m1 ACATATCT X 16955758 16955765 + X_16955758_16955765_+ 0.554240651 0.536449179 0.545344915 0.01258049 RhoGAP15B FBtr0110990|FBtr0290096 16955463|16955463 16955995|16956234 X + 16955720 16955770 3'utr RhoGAP15B FlyBase G62361.1 AGTATATGCCCTTTGTCTTCAACATAGCTCGATATCTGACATATCTAGTGT 15 16955745 0.986126358 6 9 116 0.666666667 0.77815125 0.222222222 0.133333333 0.277777778 15 5 1 12 X:16955720-16955770 8 RhoGAP15B FBtr0290096|FBtr0110990 16955463|16955463 16956234|16955995 ACATATCT 8mer-m1 dme-miR-190-5p X + 16955713 16955779 3'utr RhoGAP15B FlyBase G47074.1 ATATCTAAGTATATGCCCTTTGTCTTCAACATAGCTCGATATCTGACATATCTAGTGTTTATCTACA 18 16955732 0.984737045 8 10 136 0.615384615 0.602059991 0.230769231 0.333333333 0.538461538 18 7 3 16 X:16955713-16955779 8 8 3379 FBgn0030808 1485.72 31.16 47.79666667 0.005384595 0.256739409 0.167375689 13 26 19.5 0.2 dme-miR-13b-2-5p 6mer3-8 TTTGAC X 16956622 16956627 - X_16956622_16956627_- 0.990072775 0.999898467 0.994985621 0.006947819 CG9086 FBtr0346190 16956230 16957493 X - 16956529 16956639 3'utr CG9086 FlyBase G68316.1 TTCAGAGCCCTGTTTGACATCCATCTCACTCTAACCCGAGGAACTCGATAATATTAGTCAAACCATGTTTACTTGATCAATATACTTAACACCCTATACGACTATATATTT 15 16956625 0.984174298 10 14 102 0.9375 1.176091259 0.25 0.066666667 0.125 15 1 0 15 X:16956529-16956639 6 CG9086 FBtr0346190 16956230 16957493 TTTGAC 6mer3-8 dme-miR-13b-2-5p X - 16956607 16956654 3'utr CG9086 FlyBase G51407.1 ACAGACACCCTCTCTTTCAGAGCCCTGTTTGACATCCATCTCACTCTA 5 16956626 0.964289719 4 5 27 1 0.903089987 0 0.4 0.625 5 0 0 8 X:16956607-16956654 6 6 3380 FBgn0030809 889.67 15.31666667 23.47 0.006744074 0.391730141 0.255645505 -2 -1 -1.5 0.2 dme-miR-308-3p 7mer-m1 TGTGATT X 16957424 16957430 - X_16957424_16957430_- 0.442505503 0.443128616 0.442817059 0.000440598 CG9086 FBtr0346190|FBtr0074415|FBtr0308839 16956230|16956943|16956943 16957493|16957493|16957493 X - 16957386 16957473 3'utr CG9086 FlyBase G68321.1 GGAAGCAGAGGACAGGCAGCAAAATGGAAATGGCGGCAGTCTATGTGATTATTACATACTAACATTAGGAGAGCCTATTTTTACGTCT 87 16957424 0.985897983 12 81 647 0.932038835 1.505149978 0.194174757 0.149425287 0.281553398 87 5 2 96 X:16957386-16957473 7 CG9086 FBtr0074415|FBtr0308839|FBtr0346190 16956943|16956943|16956230 16957493|16957493|16957493 TGTGATT 7mer-m1 dme-miR-308-3p X - 16957365 16957453 3'utr CG9086 FlyBase G51411.1 AAAATGGAAATGGCGGCAGTCTATGTGATTATTACATACTAACATTAGGAGAGCCTATTTTTACGTCTAAGCATTTTACTACTTATCCG 56 16957424 0.985419332 13 53 435 0.96 1.556302501 0.133333333 0.25 0.44 56 2 1 72 X:16957365-16957453 7 65.5 3381 FBgn0030809 889.67 15.31666667 23.47 0.073622804 4.276387378 2.790796762 -6 -6 -6 0.2 dme-miR-14-3p 7mer-m8 AAGACTG X 17079812 17079818 + X_17079812_17079818_+ 0.671280497 0.671382871 0.671331684 7.24E-05 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 X + 17079767 17079843 3'utr CG4949 FlyBase G62366.1 AAAGCTGGAACGAATTTTCCAATCTCGAACGAATTTCGAGTTATTAAGACTGCATTTCCATTTTATTGACTTAAAGC 46 17079810 0.875800685 12 43 407 0.951612903 1.770852012 0.016129032 0.260869565 0.451612903 46 3 0 59 X:17079767-17079843 7 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 AAGACTG 7mer-m8 dme-miR-14-3p X + 17079797 17079844 3'utr CG4949 FlyBase G47078.1 GAATTTCGAGTTATTAAGACTGCATTTCCATTTTATTGACTTAAAGCT 22 17079810 0.988156665 7 21 191 0.931034483 0.954242509 0 0.318181818 0.482758621 22 0 2 27 X:17079797-17079844 7 29.5 3382 FBgn0030813 105.3333333 6.336666667 9.69 0.280063291 4.655444503 3.044375645 2 2 2 0.2 dme-miR-14-3p 6mer3-8 AAGACT X 17080072 17080077 + X_17080072_17080077_+ 0.994305151 0.999996877 0.997151014 0.00402464 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 X + 17080053 17080091 3'utr CG4949 FlyBase G62367.1 CGAATGCTCGATCAAATATAAGACTTTATTATAGTATAC 24 17080080 0.603818201 6 23 212 0.96875 1.190331698 0.03125 0.25 0.4375 24 0 1 31 X:17080053-17080091 6 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 AAGACT 6mer3-8 dme-miR-14-3p X + 17080045 17080091 3'utr CG4949 FlyBase G47079.1 GAAGCAATCGAATGCTCGATCAAATATAAGACTTTATTATAGTATAC 16 17080080 0.712191201 4 14 127 0.954545455 1.322219295 0.181818182 0.25 0.454545455 16 1 0 21 X:17080045-17080091 6 19 3383 FBgn0030813 105.3333333 6.336666667 9.69 0.180379747 2.998421883 1.960784314 -8 -8 -8 0.2 dme-bantam-3p 8mer-A1 TGATCTCA X 17080449 17080456 + X_17080449_17080456_+ 0.629935124 0.630357552 0.630146338 0.000298753 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 X + 17080394 17080470 3'utr CG4949 FlyBase G62369.1 GATTGGAATCCGATCTCCGCATCCCAGCCTCATATGTAGTCCAGCATGCCGCTTATGATCTCAAAGGCATCCCGAGC 30 17080449 0.974939437 6 30 186 1 1.51851394 0.696969697 0.1 0.181818182 30 0 0 33 X:17080394-17080470 8 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 TGATCTCA 8mer-A1 dme-bantam-3p X + 17080429 17080460 3'utr CG4949 FlyBase G47081.1 GTAGTCCAGCATGCCGCTTATGATCTCAAAGG 10 17080448 0.689326875 3 9 61 0.9 1.255272505 0.7 0.7 0.85 10 2 0 18 X:17080429-17080460 8 19 3384 FBgn0030813 105.3333333 6.336666667 9.69 0.180379747 2.998421883 1.960784314 0 1 0.5 0.2 dme-miR-317-5p 6mer2-7 TATCCC X 17150398 17150403 + X_17150398_17150403_+ 0.999999874 0.999693049 0.999846461 0.000217011 CG5010 FBtr0343291|FBtr0074387 17150298|17150298 17150647|17150647 X + 17150277 17150526 stop_codon CG5010 FlyBase G62399.1 AGCAGAGCCACCATCTCCAGTAGAGGGCCCAGCTCCGGTAGAATATCATCTGGCCAAGCACCGGCGGATGAACGCAGCCGGATGAACCCATCGGATGAACACCTCCGGATGAACTCTGTCCTATCCCTTCGTTTAGTTCTTAATTGTTTAATTGCAAGCATCTGAAAGAAAGCATTGTTTAATTGTAGTGCAAAATGAAATGTTAAATAGAAAATCCCGTTGGCAGCCCAAAACCCTTTCCAAAAAAAAA 111 17150398 0.999986539 32 107 651 0.965034965 2.139879086 0.251748252 0.198198198 0.377622378 111 5 0 138 X:17150277-17150526 6 CG5010 FBtr0343291|FBtr0074387 17150298|17150298 17150647|17150647 TATCCC 6mer2-7 dme-miR-317-5p X + 17150352 17150423 3'utr CG5010 FlyBase G47099.1 AGCCGGATGAACCCATCGGATGAACACCTCCGGATGAACTCTGTCCTATCCCTTCGTTTAGTTCTTAATTGT 34 17150398 0.982637935 11 31 228 0.928571429 1.716003344 0.035714286 0.382352941 0.625 34 4 0 52 X:17150352-17150423 6 32.5 3385 FBgn0260747 667.7266667 81.68 125.22 0.048672611 0.397894221 0.259543204 0 0 0 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 17241577 17241583 - X_17241577_17241583_- 0.775104718 0.771391779 0.773248249 0.002625417 CG8915 FBtr0339780|FBtr0339780|FBtr0339780|FBtr0074447|FBtr0074447|FBtr0074447 17240466|17240466|17240466|17241265|17241265|17241265 17241817|17241817|17241817|17241817|17241817|17241817 X - 17241563 17241657 3'utr CG8915 FlyBase G68397.1 TCCACTGCACTTCTTACATATTAAGGTATATCTAAGGTAGCACACACGATATCTTAACTATATTCCTTACATGTTGTGATACAAGAAGGCGCAAA 84 17241584 0.95910057 9 77 554 0.907407407 1.146128036 0.018518519 0.238095238 0.407407407 84 4 6 98 X:17241563-17241657 7 CG8915 FBtr0339780|FBtr0339780|FBtr0339780|FBtr0074447|FBtr0074447|FBtr0074447 17240466|17240466|17240466|17241265|17241265|17241265 17241817|17241817|17241817|17241817|17241817|17241817 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 17241565 17241623 3'utr CG8915 FlyBase G51462.1 AGGTAGCACACACGATATCTTAACTATATTCCTTACATGTTGTGATACAAGAAGGCGCA 54 17241585 0.981921612 9 48 364 0.87654321 0.897015839 0 0.388888889 0.592592593 54 2 8 71 X:17241565-17241623 7 64 3386 FBgn0030833 168.33 5.216666667 8 0.380205549 12.26837061 8 1 2 1.5 0.2 dme-miR-79-3p 7mer-A1 AGCTTTA X 17305161 17305167 + X_17305161_17305167_+ 0.804902186 0.819606854 0.81225452 0.010397793 CG5445 FBtr0074427|FBtr0074428|FBtr0339777|FBtr0339778|FBtr0074425 17304836|17304836|17304836|17304836|17304836 17305475|17305475|17305475|17305475|17305475 X + 17305144 17305198 3'utr CG5445 FlyBase G62414.1 TCGGTGTCAGACAGATCAGCTTTATATATATATATCGATATGTCGCGAAGGGAGC 23 17305159 0.97624235 6 18 164 0.848484848 1.447158031 0.121212121 0.347826087 0.545454545 23 5 0 28 X:17305144-17305198 7 CG5445 FBtr0339778|FBtr0074425|FBtr0074428|FBtr0339777|FBtr0074427 17304836|17304836|17304836|17304836|17304836 17305475|17305475|17305475|17305475|17305475 AGCTTTA 7mer-A1 dme-miR-79-3p X + 17305131 17305189 3'utr CG5445 FlyBase G47110.1 CCACTCCTTAATTTCGGTGTCAGACAGATCAGCTTTATATATATATATCGATATGTCGC 10 17305159 0.985392029 4 10 83 1 1.113943352 0.153846154 0.3 0.461538462 10 0 0 13 X:17305131-17305189 7 14.5 3387 FBgn0030838 342.0933333 22.24 33.86 0.042386093 0.651978417 0.428233904 2 2 2 0.2 dme-miR-8-3p 7mer-m8 CAGTATT X 17623353 17623359 - X_17623353_17623359_- 0.630806855 0.63523073 0.633018793 0.003128099 stas FBtr0074487 17623219 17623694 X - 17623328 17623423 3'utr stas FlyBase G68462.1 ACTTTTGCATCATATATTTCCATCAATCGTTTTTAAGTTAGTGAATTTTTGTTTAGTGCTATTGCAGTATTTACTAGAAAAGTTCTCCTCTAAGTA 112 17623362 0.83031074 8 111 1260 0.9921875 2.103803721 0.234375 0.142857143 0.25 112 1 0 127 X:17623328-17623423 7 stas FBtr0074487 17623219 17623694 CAGTATT 7mer-m8 dme-miR-8-3p X - 17623333 17623538 3'utr stas FlyBase G51501.1 TTTTCGGAATGCCACTTTGGGTCTCGATCCACTATGTTTAAGACAACTACAAAATATCTGTGTTTATCCTATTATTAAAATTATTAATGTTTTCTGAACTTGTTCTTACCAAACAACTTTTGCATCATATATTTCCATCAATCGTTTTTAAGTTAGTGAATTTTTGTTTAGTGCTATTGCAGTATTTACTAGAAAAGTTCTCCTCT 110 17623362 0.990887901 21 104 1104 0.957055215 2.193124598 0.214723926 0.327272727 0.54601227 110 7 0 156 X:17623333-17623538 7 81.5 3388 FBgn0030850 1912.336667 122.8733333 188.6933333 0.042618019 0.663284683 0.43191775 3 3 3 0.2 dme-miR-305-3p 6mer3-8 ATGTGC X 17640474 17640479 - X_17640474_17640479_- 0.786290355 0.774381137 0.780335746 0.008421147 RhoGAPp190 FBtr0333661|FBtr0333659|FBtr0333662|FBtr0333660|FBtr0074482|FBtr0074483 17639145|17639145|17639145|17639145|17639145|17639145 17641617|17641617|17641617|17641617|17641617|17641617 X - 17640449 17640503 3'utr RhoGAPp190 FlyBase G68487.1 AATCTAATTTTCGAGCTAAACTAAATGTGCATCTCAGTGTGTGTGTCTGTCTGTA 61 17640477 0.870920746 7 57 547 0.944444444 1.531478917 0.277777778 0.163934426 0.291666667 61 3 1 68 X:17640449-17640503 6 RhoGAPp190 FBtr0333660|FBtr0333662|FBtr0074483|FBtr0074482|FBtr0333659|FBtr0333661 17639145|17639145|17639145|17639145|17639145|17639145 17641617|17641617|17641617|17641617|17641617|17641617 ATGTGC 6mer3-8 dme-miR-305-3p X - 17640449 17640493 3'utr RhoGAPp190 FlyBase G51518.1 TCGAGCTAAACTAAATGTGCATCTCAGTGTGTGTGTCTGTCTGTA 21 17640476 0.833026673 3 20 193 0.970588235 1.51851394 0.294117647 0.476190476 0.676470588 21 1 0 33 X:17640449-17640493 6 38 3389 FBgn0026375 866.7733333 14.19333333 21.75666667 0.043840758 2.677313293 1.746591083 -2 -3 -2.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT X 17640635 17640640 - X_17640635_17640640_- 0.999999674 0.920745434 0.960372554 0.056041253 RhoGAPp190 FBtr0074481|FBtr0333661|FBtr0333659|FBtr0333662|FBtr0333660|FBtr0074482|FBtr0074483 17640504|17639145|17639145|17639145|17639145|17639145|17639145 17641617|17641617|17641617|17641617|17641617|17641617|17641617 X - 17640573 17640664 3'utr RhoGAPp190 FlyBase G68488.1 TAAATACCACTAAATGTCTGTGTGTCTAGTATAGGAGAAAGTAGGAGAGGTGGAGCCGTAGGAGCAGGGGGAGGGGGAGAGAAAGGATGAGC 18 17640641 0.984977476 9 17 128 0.95 1.278753601 0.25 0.111111111 0.2 18 1 0 19 X:17640573-17640664 6 RhoGAPp190 FBtr0333660|FBtr0333662|FBtr0074483|FBtr0074482|FBtr0074481|FBtr0333659|FBtr0333661 17639145|17639145|17639145|17639145|17640504|17639145|17639145 17641617|17641617|17641617|17641617|17641617|17641617|17641617 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" X - 17640566 17640665 3'utr RhoGAPp190 FlyBase G51519.1 TTAAATACCACTAAATGTCTGTGTGTCTAGTATAGGAGAAAGTAGGAGAGGTGGAGCCGTAGGAGCAGGGGGAGGGGGAGAGAAAGGATGAGCGAAGCGA 8 17640640 0.9804256 5 8 53 1 1.176091259 0.4 0.625 0.8 8 0 0 15 X:17640566-17640665 6 10.5 3390 FBgn0026375 866.7733333 14.19333333 21.75666667 0.012113894 0.739783936 0.482610694 1 0 0.5 0.2 dme-miR-318-3p 7mer-A1 CCAGTGA X 17668624 17668630 + X_17668624_17668630_+ 0.758926809 0.683018834 0.720972821 0.053675062 beta-Spec FBtr0334405 17667960 17669371 X + 17668568 17668660 3'utr beta-Spec FlyBase G62494.1 ATTGACCTTCCGCGGTGAGCCCAGCTACGATCTGCAAAACGCTGCCATCGAAATTGCCAGTGATTACACCAAGAAGAAGCACGTTCTGCGAGT 24 17668632 0.896149945 6 23 95 0.965517241 1.447158031 0.24137931 0.166666667 0.310344828 24 1 0 28 X:17668568-17668660 7 beta-Spec FBtr0334405 17667960 17669371 CCAGTGA 7mer-A1 dme-miR-318-3p X + 17668613 17668648 3'utr beta-Spec FlyBase G47158.1 CATCGAAATTGCCAGTGATTACACCAAGAAGAAGCA 9 17668632 0.954673847 2 8 36 0.928571429 1.113943352 0.285714286 0.444444444 0.642857143 9 1 0 13 X:17668613-17668648 7 13 3391 FBgn0250788 4584.71 71.70666667 109.7433333 0.002835512 0.181294161 0.118458221 -8 -8 -8 0.2 dme-miR-980-3p 7mer-A1 GCAGCTA X 17668969 17668975 + X_17668969_17668975_+ 0.818665715 0.807128231 0.812896973 0.008158244 beta-Spec FBtr0334404|FBtr0074454|FBtr0334405 17668936|17668936|17667960 17669371|17669371|17669371 X + 17668943 17669050 3'utr beta-Spec FlyBase G62496.1 CAGCCGTAACGCAACCATAAGCAAGAGCAGCTAATTAAAACAAATAACAAATAACATGAAATGATATAATACAAATGCAAAACGACAACAAATTATACAGCAAAAATT 36 17668977 0.943899992 8 29 116 0.842105263 1.505149978 0 0.055555556 0.105263158 36 6 0 32 X:17668943-17669050 7 beta-Spec FBtr0334405|FBtr0074454|FBtr0334404 17667960|17668936|17668936 17669371|17669371|17669371 GCAGCTA 7mer-A1 dme-miR-980-3p X + 17668943 17668980 3'utr beta-Spec FlyBase G47160.1 CAGCCGTAACGCAACCATAAGCAAGAGCAGCTAATTAA 8 17668960 0.949219321 3 6 24 0.727272727 0.903089987 0 0.375 0.545454545 8 3 0 8 X:17668943-17668980 7 16 3392 FBgn0250788 4584.71 71.70666667 109.7433333 0.003489861 0.223131276 0.145794733 -8 9 0.5 0.2 dme-miR-932-5p 7mer-A1 GAATTGA X 17706628 17706634 + X_17706628_17706634_+ 0.403770325 0.526150841 0.464960583 0.086536081 par-6 FBtr0074455 17705418 17707096 X + 17706606 17706652 3'utr par-6 FlyBase G62513.1 ACGTACCCCTGTACACACAATTGAATTGAAGTCTGTGTATTCGCTTT 21 17706631 0.776636868 4 21 180 1 1.380211242 0 0.095238095 0.208333333 21 0 0 24 X:17706606-17706652 7 par-6 FBtr0074455 17705418 17707096 GAATTGA 7mer-A1 dme-miR-932-5p X + 17706615 17706652 3'utr par-6 FlyBase G47175.1 TGTACACACAATTGAATTGAAGTCTGTGTATTCGCTTT 12 17706631 0.870498979 5 11 106 0.941176471 1.204119983 0 0.166666667 0.411764706 12 1 0 16 X:17706615-17706652 7 16 3393 FBgn0026192 952.7333333 39.83333333 61.04 0.016793786 0.40167364 0.262123198 -3 -3 -3 0.2 dme-miR-33-5p 7mer-m1 AATGCAC X 17707476 17707482 - X_17707476_17707482_- 0.829677278 0.688359729 0.759018503 0.099926633 CG8173 FBtr0074475 17707399 17707634 X - 17707459 17707516 3'utr CG8173 FlyBase G68531.1 AACAAACCAATTACGGTTAAAGCCCCAAAACGCGAATGCACACTTAAGCAAATTGTAC 9 17707479 0.912550339 4 8 26 1 1 0.1 0.111111111 0.2 9 0 0 10 X:17707459-17707516 7 CG8173 FBtr0074475 17707399 17707634 AATGCAC 7mer-m1 dme-miR-33-5p X - 17707458 17707498 3'utr CG8173 FlyBase G51550.1 AAAGCCCCAAAACGCGAATGCACACTTAAGCAAATTGTACA 7 17707480 0.908424206 2 7 17 1 1.146128036 0.071428571 0.571428571 0.785714286 7 0 0 14 X:17707458-17707498 7 6.5 3394 FBgn0030864 922.93 68.84666667 105.6433333 0.007042788 0.094412705 0.061527782 -3 -2 -2.5 0.2 dme-miR-252-5p 8mer-m1 GTACTTAG X 17821339 17821346 - X_17821339_17821346_- 0.635823229 0.63621342 0.636018325 0.000275913 Socs16D FBtr0310310|FBtr0074473 17820762|17820773 17822326|17822326 X - 17821279 17821382 3'utr Socs16D FlyBase G68544.1 AAAGCGAGCGAATTATGATATAACCATTAACGCATTGTACTTAGTTTAATCCATGTCATGTACACAAATGATCGATTGCCAGATGGAAAGAATGGCGAACACAC 43 17821347 0.982730105 8 42 317 0.982142857 1.740362689 0.053571429 0.279069767 0.446428571 43 1 0 55 X:17821279-17821382 8 Socs16D FBtr0074473|FBtr0310310 17820773|17820762 17822326|17822326 GTACTTAG 8mer-m1 dme-miR-252-5p X - 17821282 17821408 3'utr Socs16D FlyBase G51559.1 GCAACGCCCGTGCCCAAAGGTCCTTGAAAGCGAGCGAATTATGATATAACCATTAACGCATTGTACTTAGTTTAATCCATGTCATGTACACAAATGATCGATTGCCAGATGGAAAGAATGGCGAACA 33 17821347 0.975830784 10 33 208 1 1.73239376 0.092592593 0.454545455 0.666666667 33 0 0 54 X:17821282-17821408 8 17.5 3395 FBgn0030869 790.3733333 19.79 30.42 0.022141435 0.884284992 0.575279421 1 1 1 0.2 dme-miR-1008-3p 8mer-A1 AGCTGTGA X 17821556 17821563 - X_17821556_17821563_- 0.63919156 0.638273548 0.638732554 0.000649195 Socs16D FBtr0310310|FBtr0074473 17820762|17820773 17822326|17822326 X - 17821513 17821582 3'utr Socs16D FlyBase G68545.1 ACTTTTATGCTTGCCTTTTAGCTGTGATTTAAATAAGTCGTCGAATGTTAATTGGAAGACGATGTGCAGT 61 17821565 0.992139498 12 56 632 0.931506849 1.531478917 0.178082192 0.163934426 0.301369863 61 4 1 68 X:17821513-17821582 8 Socs16D FBtr0074473|FBtr0310310 17820773|17820762 17822326|17822326 AGCTGTGA 8mer-A1 dme-miR-1008-3p X - 17821535 17821576 3'utr Socs16D FlyBase G51560.1 ATGCTTGCCTTTTAGCTGTGATTTAAATAAGTCGTCGAATGT 52 17821554 0.62935682 11 48 531 0.933333333 1.62324929 0.244444444 0.538461538 0.733333333 52 5 1 84 X:17821535-17821576 8 54 3396 FBgn0030869 790.3733333 19.79 30.42 0.068322143 2.728650834 1.775147929 2 -9 -3.5 0.2 "dme-miR-995-3p,dme-miR-998-3p" 7mer-A1 GGTGCTA X 17821924 17821930 - X_17821924_17821930_- 0.823096338 0.823336744 0.823216541 0.000169988 Socs16D FBtr0310310|FBtr0074473 17820762|17820773 17822326|17822326 X - 17821913 17821940 3'utr Socs16D FlyBase G68548.1 TTTTGTACTCGGTGCTATACTATAAATA 9 17821934 0.71350446 5 8 80 0.888888889 0.903089987 0 0 0 9 1 0 8 X:17821913-17821940 7 Socs16D FBtr0074473|FBtr0310310 17820773|17820762 17822326|17822326 GGTGCTA 7mer-A1 "dme-miR-995-3p,dme-miR-998-3p" X - 17821911 17821940 3'utr Socs16D FlyBase G51561.1 TTTTGTACTCGGTGCTATACTATAAATATT 9 17821936 0.627289222 6 8 83 0.857142857 1.079181246 0.071428571 0.444444444 0.642857143 9 2 0 12 X:17821911-17821940 7 9 3397 FBgn0030869 790.3733333 19.79 30.42 0.011387024 0.454775139 0.295857988 4 6 5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA X 1785854 1785861 + X_1785854_1785861_+ 0.313030019 0.647938035 0.480484027 0.236815718 Adar FBtr0305499|FBtr0305499|FBtr0305499|FBtr0339272|FBtr0339272|FBtr0339272|FBtr0070300|FBtr0070300|FBtr0070300 1783753|1783753|1783753|1783753|1783753|1783753|1783753|1783753|1783753 1788065|1788065|1788065|1788065|1788065|1788065|1788065|1788065|1788065 X + 1785822 1785857 3'utr Adar FlyBase G58051.1 TGGATAAACCAAAGTTGATCTTATATAAAATACTGT 17 1785836 0.875302419 4 14 114 0.894736842 0.753327667 0.052631579 0.117647059 0.210526316 17 0 2 17 X:1785822-1785857 4 Adar FBtr0070300|FBtr0070300|FBtr0070300|FBtr0305499|FBtr0305499|FBtr0305499|FBtr0339272|FBtr0339272|FBtr0339272 1783753|1783753|1783753|1783753|1783753|1783753|1783753|1783753|1783753 1788065|1788065|1788065|1788065|1788065|1788065|1788065|1788065|1788065 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X + 1785822 1785870 3'utr Adar FlyBase G43913.1 TGGATAAACCAAAGTTGATCTTATATAAAATACTGTGATACTAAATTTT 16 1785837 0.840277577 6 12 113 0.695652174 0.903089987 0 0.375 0.565217391 16 6 1 16 X:1785822-1785870 8 9 3398 FBgn0026086 1030.723333 39.3 60.36 0.008731732 0.229007634 0.149105368 18 17 17.5 0.2 dme-miR-305-5p 7mer-m1 GTACAAT X 17858578 17858584 - X_17858578_17858584_- 0.765586302 0.765586121 0.765586211 1.41E-07 Arp8 FBtr0074544 17858377 17858769 X - 17858540 17858602 3'utr Arp8 FlyBase G68565.1 ACAAATTTATACAAGATTGTACAATTATTTTATTTTTAAAGACACCTAACAAATATGCAGAAT 7 17858579 0.99459099 6 6 63 0.777777778 0.84509804 0.111111111 0.285714286 0.444444444 7 2 0 7 X:17858540-17858602 7 Arp8 FBtr0074544 17858377 17858769 GTACAAT 7mer-m1 dme-miR-305-5p X - 17858573 17858643 3'utr Arp8 FlyBase G51575.1 AGCATTACCCTGGAGGAAGGAAACACTCCGGATGGGGTCATACAAATTTATACAAGATTGTACAATTATTT 11 17858584 0.87856763 7 11 55 1 1.146128036 0 0.181818182 0.357142857 11 0 0 14 X:17858573-17858643 7 4.5 3399 FBgn0030877 203.0033333 10.82333333 16.55 0.022167124 0.415768402 0.271903323 -5 0 -2.5 0.2 dme-bantam-3p 7mer-A1 GATCTCA X 17924507 17924513 - X_17924507_17924513_- 0.822375032 0.822051623 0.822213328 0.000228678 Sh FBtr0089658 17924305 17930123 X - 17924496 17924534 3'utr Sh FlyBase G68596.1 AAATTGAAACCAACCAAATTGGATCTCAAATCAAAGCAG 54 17924515 0.777553198 3 50 223 0.9375 1.477121255 0.046875 0.148148148 0.28125 54 3 1 60 X:17924496-17924534 7 Sh FBtr0089658 17924305 17930123 GATCTCA 7mer-A1 dme-bantam-3p X - 17924495 17924530 3'utr Sh FlyBase G51593.1 TGAAACCAACCAAATTGGATCTCAAATCAAAGCAGC 34 17924515 0.934119463 2 31 135 0.921568627 1.371067862 0.039215686 0.411764706 0.607843137 34 3 1 47 X:17924495-17924530 7 44 3400 FBgn0003380 28.61666667 0.493333333 0.783333333 1.537565521 89.18918919 56.17021277 2 2 2 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC X 18078953 18078959 - X_18078953_18078959_- 0.661439553 0.661599148 0.66151935 0.000112784 CG7536 FBtr0343317|FBtr0343318|FBtr0074530 18078489|18078861|18078861 18079653|18079653|18079653 X - 18078916 18079015 3'utr CG7536 FlyBase G68597.1 AACTAGAGCTGATCCCGAACGGAATTGTACATAGTATACGTATGCTAGTGCCTGTGTGTGTTCTTTTCGCTCTGCGTGTGTGTGTGTGTGTGTGAGTGTG 28 18078952 0.991302797 8 26 277 0.96969697 1.505149978 0.212121212 0.142857143 0.272727273 28 1 0 32 X:18078916-18079015 7 CG7536 FBtr0074530|FBtr0343317|FBtr0343318 18078861|18078489|18078861 18079653|18079653|18079653 TGTGTTC 7mer-m8 dme-miR-317-3p X - 18078916 18079031 5'utr-coding CG7536 FlyBase G51596.1 AAGTTTAAAGAACTTAAACTAGAGCTGATCCCGAACGGAATTGTACATAGTATACGTATGCTAGTGCCTGTGTGTGTTCTTTTCGCTCTGCGTGTGTGTGTGTGTGTGTGAGTGTG 20 18078952 0.984385208 14 20 176 1 1.431363764 0.185185185 0.25 0.444444444 20 0 0 27 X:18078916-18079031 7 16 3401 FBgn0030890 573.73 20 30.81333333 0.027887682 0.8 0.519255733 -7 -7 -7 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 18079078 18079083 - X_18079078_18079083_- 0.779260635 0.712947447 0.746104041 0.046890513 CG7536 FBtr0343317|FBtr0343317|FBtr0343317|FBtr0343318|FBtr0343318|FBtr0343318|FBtr0074531|FBtr0074531|FBtr0074531|FBtr0074530|FBtr0074530|FBtr0074530 18078489|18078489|18078489|18078861|18078861|18078861|18079015|18079015|18079015|18078861|18078861|18078861 18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653 X - 18079056 18079115 5'utr CG7536 FlyBase G68598.1 CTGTCCACCTGTTGATTGATATACGACATAGACTGTGACCAAATCGAAACTTAAACTAAA 147 18079086 0.781455878 12 122 714 0.971428571 1.929418926 0.297142857 0.143835616 0.285714286 146 4 1 170 X:18079056-18079115 6 CG7536 FBtr0074531|FBtr0074531|FBtr0074531|FBtr0074530|FBtr0074530|FBtr0074530|FBtr0343317|FBtr0343317|FBtr0343317|FBtr0343318|FBtr0343318|FBtr0343318 18079015|18079015|18079015|18078861|18078861|18078861|18078489|18078489|18078489|18078861|18078861|18078861 18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X - 18079060 18079140 5'utr CG7536 FlyBase G51597.1 TAGATCTGCCTTATCTGTTATCTGTCTGTCCACCTGTTGATTGATATACGACATAGACTGTGACCAAATCGAAACTTAAAC 101 18079081 0.750316737 14 97 571 0.99378882 1.903089987 0.298136646 0.356435644 0.596273292 101 0 1 160 X:18079060-18079140 6 101 3402 FBgn0030890 573.73 20 30.81333333 0.176040995 5.05 3.277801817 3 -2 0.5 0.2 dme-miR-252-5p 8mer-m1 GTACTTAG X 18079247 18079254 - X_18079247_18079254_- 0.636772771 0.630871467 0.633822119 0.004172849 CG7536 FBtr0343317|FBtr0343318|FBtr0074531|FBtr0074530 18078489|18078861|18079015|18078861 18079653|18079653|18079653|18079653 X - 18079236 18079299 5'utr CG7536 FlyBase G68600.1 AATCCATACCTTCCACAGAAATTGGAGTAGAGAACGGCAGTATTAGTACTTAGAAAAGGCGAAC 10 18079252 0.967788521 5 10 52 1 1.041392685 0.181818182 0.1 0.181818182 10 0 0 11 X:18079236-18079299 8 CG7536 FBtr0074531|FBtr0074530|FBtr0343317|FBtr0343318 18079015|18078861|18078489|18078861 18079653|18079653|18079653|18079653 GTACTTAG 8mer-m1 dme-miR-252-5p X - 18079245 18079300 5'utr CG7536 FlyBase G51598.1 TAATCCATACCTTCCACAGAAATTGGAGTAGAGAACGGCAGTATTAGTACTTAGAA 6 18079257 0.952381365 3 6 25 1 1 0 0.5 0.7 6 0 0 10 X:18079245-18079300 8 5.5 3403 FBgn0030890 573.73 20 30.81333333 0.009586391 0.275 0.178494158 -2 3 0.5 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA X 18079495 18079502 - X_18079495_18079502_- 0.472093661 0.384329031 0.428211346 0.062059015 CG7536 FBtr0343317|FBtr0343318|FBtr0074531|FBtr0074530 18078489|18078861|18079015|18078861 18079653|18079653|18079653|18079653 X - 18079452 18079532 5'utr CG7536 FlyBase G68603.1 GTTTAGCTAATTTGTATATTTAGTGACTAAGTACTTAAAATTGAGGAGAGACAATGTCCAGCAATAATTAGTGCATAAGAT 38 18079477 0.659099148 12 34 199 0.905660377 1.380211242 0.20754717 0.315789474 0.509433962 38 4 1 48 X:18079452-18079532 8 CG7536 FBtr0074531|FBtr0074530|FBtr0343317|FBtr0343318 18079015|18078861|18078489|18078861 18079653|18079653|18079653|18079653 GTACTTAA 8mer-A1 dme-miR-252-5p X - 18079458 18079518 5'utr CG7536 FlyBase G51601.1 TATATTTAGTGACTAAGTACTTAAAATTGAGGAGAGACAATGTCCAGCAATAATTAGTGCA 26 18079491 0.685501035 8 25 126 0.911764706 1.491361694 0.117647059 0.230769231 0.411764706 26 3 0 31 X:18079458-18079518 8 17.5 3404 FBgn0030890 573.73 20 30.81333333 0.030502153 0.875 0.567935958 -25 -11 -18 0.2 dme-miR-14-3p 6mer2-7 AGACTG X 18087933 18087938 + X_18087933_18087938_+ 0.96988767 0.629302591 0.79959513 0.240830034 dik FBtr0339540|FBtr0074510 18087677|18087581 18088418|18088418 X + 18087844 18087985 3'utr dik FlyBase G62595.1 GAGTTTTGGCATTCGTTTTCCCCAAATCGAACGCCACTTTTGAGTCGTTTTCGACTAGCTTCCAAACCCGTATTCTTATCTTCGTCACCAGACTGTACATTAACAAAGATACATTAGCTCATAGAATGTAGTGTTCAAGATT 47 18087939 0.979101437 19 45 303 0.961538462 1.397940009 0.096153846 0.106382979 0.192307692 47 1 1 50 X:18087844-18087985 6 dik FBtr0339540|FBtr0074510 18087677|18087581 18088418|18088418 AGACTG 6mer2-7 dme-miR-14-3p X + 18087894 18087978 3'utr dik FlyBase G47223.1 TCGACTAGCTTCCAAACCCGTATTCTTATCTTCGTCACCAGACTGTACATTAACAAAGATACATTAGCTCATAGAATGTAGTGTT 41 18087938 0.777740845 14 39 268 0.967741935 1.477121255 0.129032258 0.390243902 0.596774194 41 1 1 60 X:18087894-18087978 6 29.5 3405 FBgn0030891 215.6666667 9.88 15.20666667 0.136785162 2.98582996 1.939938623 -6 -5 -5.5 0.2 dme-miR-34-5p 7mer-A1 ACTGCCA X 18088759 18088765 - X_18088759_18088765_- 0.82063621 0.819956334 0.820296272 0.000480762 CG7206 FBtr0089576|FBtr0308352 18088723|18088723 18089007|18089869 X - 18088733 18088826 3'utr CG7206 FlyBase G68622.1 GGCCACTGACGACGTGTTCACCCAAGACTAAAAACTTGCACATATTAGAAGATCAGATTTGACTGCCATTTGCTACGTATAATAAAGTTTGTTT 73 18088768 0.98128655 14 69 502 0.93902439 1.886490725 0.195121951 0.109589041 0.207317073 73 5 0 77 X:18088733-18088826 7 CG7206 FBtr0089576|FBtr0308352 18088723|18088723 18089007|18089869 ACTGCCA 7mer-A1 dme-miR-34-5p X - 18088749 18088826 3'utr CG7206 FlyBase G51613.1 GGCCACTGACGACGTGTTCACCCAAGACTAAAAACTTGCACATATTAGAAGATCAGATTTGACTGCCATTTGCTACGT 55 18088768 0.978579715 12 52 368 0.946808511 1.171238756 0.287234043 0.454545455 0.680851064 55 0 5 89 X:18088749-18088826 7 53 3406 FBgn0030892 243 18.00333333 27.36 0.218106996 2.943899278 1.937134503 3 3 3 0.2 dme-miR-2a-2-5p 7mer-m1 GATGAGG X 18089607 18089613 - X_18089607_18089613_- 0.398441235 0.399745425 0.39909333 0.000922209 CG7206 FBtr0308352 18088723 18089869 X - 18089499 18089634 5'utr CG7206 FlyBase G68627.1 GAGGCGCCACAGAAAGGTCAGGATGAGGCTAAGGAAGAGGACGACACTATATTGATGCTGCAGGCGGCCGATGCCGAGGAGCTGCCCCCAAGGCTTGAGGATTACATGTACTTTGTGCTGGACACCAACGTCCTCA 125 18089611 0.894010264 11 121 311 0.97826087 2.130333768 0.260869565 0.096 0.18115942 125 3 0 135 X:18089499-18089634 7 CG7206 FBtr0308352 18088723 18089869 GATGAGG 7mer-m1 dme-miR-2a-2-5p X - 18089564 18089635 5'utr CG7206 FlyBase G51619.1 GGAGGCGCCACAGAAAGGTCAGGATGAGGCTAAGGAAGAGGACGACACTATATTGATGCTGCAGGCGGCCGA 56 18089611 0.87827535 4 54 120 0.967391304 1.949390007 0.315217391 0.428571429 0.652173913 56 3 0 89 X:18089564-18089635 7 79 3407 FBgn0030892 243 18.00333333 27.36 0.325102881 4.388076282 2.887426901 -2 -2 -2 0.2 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG X 18097086 18097092 + X_18097086_18097092_+ 0.626432799 0.618845058 0.622638929 0.005365314 RhoGAP16F FBtr0074513|FBtr0307200|FBtr0307201|FBtr0343310 18096876|18096876|18096876|18096876 18097413|18097413|18097413|18097413 X + 18097057 18097112 3'utr RhoGAP16F FlyBase G62618.1 ATCCTCAACCCGAAACCGAACACCCCACTGTACCTGCCACACCTCTATACCCATTC 172 18097085 0.975605003 3 171 493 0.995024876 2.301029996 0 0.139534884 0.263681592 172 1 0 200 X:18097057-18097112 7 RhoGAP16F FBtr0307201|FBtr0074513|FBtr0343310|FBtr0307200 18096876|18096876|18096876|18096876 18097413|18097413|18097413|18097413 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" X + 18097060 18097109 3'utr RhoGAP16F FlyBase G47244.1 CTCAACCCGAAACCGAACACCCCACTGTACCTGCCACACCTCTATACCCA 84 18097085 0.972804142 2 82 245 0.968992248 1.795880017 0.007751938 0.357142857 0.581395349 84 3 1 125 X:18097060-18097109 7 127.5 3408 FBgn0030893 601.22 27.60666667 42.25333333 0.212068793 4.61844965 3.017513411 1 1 1 0.2 dme-miR-14-3p 6mer2-7 AGACTG X 18097710 18097715 - X_18097710_18097715_- 0.687595143 0.876044501 0.781819822 0.133253849 CG7192 FBtr0074528|FBtr0074527|FBtr0310272 18097556|18097556|18097556 18098391|18098391|18098391 X - 18097631 18097750 3'utr CG7192 FlyBase G68632.1 CATATATCTATTACATATTAGCTCTAGTGACGATTAGACTGTATTGCAAAATCATAGATTCTTCCCAGCTGCCTCCGTCCCCGTCATCCGCATTCCCAGCTCCTTTTCGCCCCTCTTCCT 1121 18097717 0.987311583 18 1096 9676 0.979607251 2.635818721 0.069486405 0.149866191 0.28021148 1121 25 2 1297 X:18097631-18097750 6 CG7192 FBtr0074527|FBtr0310272|FBtr0074528 18097556|18097556|18097556 18098391|18098391|18098391 AGACTG 6mer2-7 dme-miR-14-3p X - 18097655 18097744 3'utr CG7192 FlyBase G51623.1 TCTATTACATATTAGCTCTAGTGACGATTAGACTGTATTGCAAAATCATAGATTCTTCCCAGCTGCCTCCGTCCCCGTCATCCGCATTCC 715 18097717 0.811940449 17 690 5858 0.970588235 1.909720566 0.061580882 0.384615385 0.595588235 715 20 12 1056 X:18097655-18097744 6 890 3409 FBgn0030894 672.5866667 40.63666667 62.49666667 1.323249544 21.90140267 14.24075951 2 2 2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 18098008 18098013 - X_18098008_18098013_- 0.729258607 0.78211574 0.755687173 0.037375614 CG7192 FBtr0074528|FBtr0074528|FBtr0074528|FBtr0074527|FBtr0074527|FBtr0074527|FBtr0310272|FBtr0310272|FBtr0310272 18097556|18097556|18097556|18097556|18097556|18097556|18097556|18097556|18097556 18098391|18098391|18098391|18098391|18098391|18098391|18098391|18098391|18098391 X - 18097979 18098049 3'utr CG7192 FlyBase G68635.1 ATATACATACATGCATCGATTAACCCCAAATCAAATTGTGATCAAAGGAGCGAGCGCAATGTTTTGTCATT 380 18098014 0.742963396 7 367 1673 0.967517401 1.620136055 0.062645012 0.121052632 0.225058005 380 5 9 417 X:18097979-18098049 6 CG7192 FBtr0074527|FBtr0074527|FBtr0074527|FBtr0310272|FBtr0310272|FBtr0310272|FBtr0074528|FBtr0074528|FBtr0074528 18097556|18097556|18097556|18097556|18097556|18097556|18097556|18097556|18097556 18098391|18098391|18098391|18098391|18098391|18098391|18098391|18098391|18098391 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 18097977 18098042 3'utr CG7192 FlyBase G51625.1 TACATGCATCGATTAACCCCAAATCAAATTGTGATCAAAGGAGCGAGCGCAATGTTTTGTCATTAA 210 18098014 0.954500981 6 200 915 0.959876543 1.53851788 0.067901235 0.419047619 0.62345679 210 5 8 311 X:18097977-18098042 6 291.5 3410 FBgn0030894 672.5866667 40.63666667 62.49666667 0.433401396 7.173324584 4.66424876 1 1 1 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT X 18098258 18098264 - X_18098258_18098264_- 0.510138705 0.472669403 0.491404054 0.026494796 CG7192 FBtr0074528|FBtr0074527|FBtr0310272 18097556|18097556|18097556 18098391|18098391|18098391 X - 18098234 18098287 3'utr CG7192 FlyBase G68636.2 TAATCGCAAATAGATGCGCGTGTGGCAGCTGCCATGGTTAACCCAGTAGTTATT 171 18098265 0.841304419 9 167 783 0.99009901 2.301029996 0.287128713 0.152046784 0.282178218 171 2 0 200 X:18098234-18098287 7 CG7192 FBtr0074527|FBtr0310272|FBtr0074528 18097556|18097556|18097556 18098391|18098391|18098391 GGCAGCT 7mer-m8 dme-miR-980-3p X - 18098139 18098286 3'utr CG7192 FlyBase G51626.1 AATCGCAAATAGATGCGCGTGTGGCAGCTGCCATGGTTAACCCAGTAGTTATTCAGTTGGTATTAAGTTCTGAGGACCCCGGCCCCTTAGAGTAAAATGTGTGTAATATTCCTGTGCCTTCGATATGTATCTAATTTGGATGCTCGCC 134 18098265 0.841770574 21 131 638 0.984293194 2.274157849 0.308900524 0.305970149 0.513089005 134 3 0 188 X:18098139-18098286 7 139 3411 FBgn0030894 672.5866667 40.63666667 62.49666667 0.206664816 3.420556148 2.22411862 1 1 1 0.2 dme-miR-308-3p 8mer-m1 CTGTGATT X 18240797 18240804 - X_18240797_18240804_- 0.384170378 0.385559291 0.384864835 0.000982101 upd2 FBtr0300182 18240652 18241347 X - 18240784 18240818 3'utr upd2 FlyBase G68658.1 AATGCTTAAATCTACTGTGATTTATTTTAAGTACT 24 18240797 0.713651948 3 23 254 0.965517241 1.447158031 0.310344828 0.166666667 0.310344828 24 1 0 28 X:18240784-18240818 8 upd2 FBtr0300182 18240652 18241347 CTGTGATT 8mer-m1 dme-miR-308-3p X - 18240786 18240816 3'utr upd2 FlyBase G51649.1 TGCTTAAATCTACTGTGATTTATTTTAAGTA 9 18240797 0.655473911 3 9 99 1 1 0.3 0.111111111 0.2 9 0 0 10 X:18240786-18240816 8 16.5 3412 FBgn0030904 6 0.38 0.586666667 2.75 43.42105263 28.125 -7 -7 -7 0.2 dme-miR-8-3p 8mer-A1 CAGTATTA X 18241279 18241286 - X_18241279_18241286_- 0.671635363 0.670537858 0.67108661 0.00077605 upd2 FBtr0300182 18240652 18241347 X - 18241267 18241311 3'utr upd2 FlyBase G68661.1 CAGCCGGGTCAACATCACGCCCTTCCAGTATTATAGCGAGTACTT 13 18241288 0.774020328 4 11 83 0.866666667 0.812913357 0 0.153846154 0.266666667 13 1 1 13 X:18241267-18241311 8 upd2 FBtr0300182 18240652 18241347 CAGTATTA 8mer-A1 dme-miR-8-3p X - 18241273 18241301 3'utr upd2 FlyBase G51651.1 AACATCACGCCCTTCCAGTATTATAGCGA 6 18241288 0.838403907 2 5 32 0.888888889 0.903089987 0 0.333333333 0.555555556 6 1 0 8 X:18241273-18241301 8 9.5 3413 FBgn0030904 6 0.38 0.586666667 1.583333333 25 16.19318182 2 2 2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA X 18284395 18284402 + X_18284395_18284402_+ 0.637916233 0.632451649 0.635183941 0.003864056 upd3 FBtr0113465|FBtr0113465|FBtr0113465 18283950|18283950|18283950 18284596|18284596|18284596 X + 18284359 18284417 3'utr upd3 FlyBase G62630.1 AAGTATACTAGATATACTTTGCCTTGTATTACGATGCTGTGATAGTAGATGATTAAAGT 34 18284393 0.766648922 8 27 289 0.8 1.028028724 0.55 0.176470588 0.3 34 6 2 32 X:18284359-18284417 8 upd3 FBtr0113465|FBtr0113465|FBtr0113465 18283950|18283950|18283950 18284596|18284596|18284596 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X + 18284368 18284419 3'utr upd3 FlyBase G47255.1 AGATATACTTTGCCTTGTATTACGATGCTGTGATAGTAGATGATTAAAGTAA 30 18284393 0.839112212 7 29 274 0.978723404 1.662757832 0.340425532 0.366666667 0.595744681 30 1 0 46 X:18284368-18284419 8 30 3414 FBgn0053542 45.60666667 2.493333333 3.816666667 0.657798567 12.03208556 7.860262009 2 2 2 0.2 dme-miR-283-5p 8mer-m1 TGATATTT X 18495772 18495779 - X_18495772_18495779_- 0.55043561 0.431178742 0.490807176 0.084327363 GalNAc-T2 FBtr0346082|FBtr0074625 18495065|18495182 18496408|18496408 X - 18495674 18495854 3'utr GalNAc-T2 FlyBase G68714.1 GAAAATCATCACAATTAGCTGATAGTGAACCCATTCCCATTTCGATCGGCGAATCTCATACAATAGATATTCAATTGATATTTGGGAGGATCCAAGCCTGGGGGATTTCCGTGCCGACCTCGTGTGTGTGTGTCCTTGCGTATGAGTGAGAGAATGCGATGGGTATAGAGCGGAAGCGAAT 23 18495781 0.986558614 15 20 163 0.888888889 1.079181246 0.111111111 0.173913043 0.296296296 23 2 1 24 X:18495674-18495854 8 GalNAc-T2 FBtr0074625|FBtr0346082 18495182|18495065 18496408|18496408 TGATATTT 8mer-m1 dme-miR-283-5p X - 18495727 18495811 3'utr GalNAc-T2 FlyBase G51688.1 GATCGGCGAATCTCATACAATAGATATTCAATTGATATTTGGGAGGATCCAAGCCTGGGGGATTTCCGTGCCGACCTCGTGTGTG 12 18495780 0.985284187 6 12 74 1 1.380211242 0.25 0.583333333 0.791666667 12 0 0 24 X:18495727-18495811 8 5.5 3415 FBgn0030930 489.5666667 17.31333333 26.39333333 0.011234425 0.31767424 0.208385956 2 1 1.5 0.2 dme-miR-1012-3p 7mer-A1 TGACTAA X 18501798 18501804 - X_18501798_18501804_- 0.816552963 0.758710652 0.787631807 0.040900683 Wnt5 FBtr0343046|FBtr0074623 18501399|18501554 18501837|18501837 X - 18501770 18501812 3'utr Wnt5 FlyBase G68723.1 AATGTTTGTGACTAAGCCATGAAGGAAATAATCGTATTTAAAC 6 18501809 0.982473773 4 6 32 1 0.954242509 0 0.5 0.666666667 6 0 0 9 X:18501770-18501812 7 Wnt5 FBtr0343046|FBtr0074623 18501399|18501554 18501837|18501837 TGACTAA 7mer-A1 dme-miR-1012-3p X - 18501782 18501839 stop_codon Wnt5 FlyBase G51694.1 AGAGCGTTGATTGAATTCGAATGTCTTAATGTTTGTGACTAAGCCATGAAGGAAATAA 8 18501793 0.933876318 5 7 36 1 1.230448921 0.588235294 0.875 0.941176471 8 0 0 17 X:18501782-18501839 7 5.5 3416 FBgn0010194 534.6666667 16.08666667 24.67666667 0.010286783 0.341898052 0.222882615 5 -11 -3 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 18520394 18520399 + X_18520394_18520399_+ 0.765054486 0.757683732 0.761369109 0.005211943 Aats-his FBtr0333806|FBtr0333804|FBtr0074593|FBtr0333805 18520197|18520197|18520197|18520197 18520445|18520445|18520445|18520445 X + 18520300 18520408 3'utr Aats-his FlyBase G62663.1 ACGTTTTGTATTCTTGGTGTCCTGGCCGGAGGCGCCGCGTGCTACTATGCTTAGGTCTACAGTGTAACCATAGGAATAAGTGCGGACAACTTATACCAAAATGAACACT 72 18520393 0.876923305 17 69 393 0.9625 1.58546073 0.275 0.097222222 0.1875 72 2 1 77 X:18520300-18520408 6 Aats-his FBtr0333805|FBtr0074593|FBtr0333804|FBtr0333806 18520197|18520197|18520197|18520197 18520445|18520445|18520445|18520445 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 18520300 18520405 3'utr Aats-his FlyBase G47277.2 ACGTTTTGTATTCTTGGTGTCCTGGCCGGAGGCGCCGCGTGCTACTATGCTTAGGTCTACAGTGTAACCATAGGAATAAGTGCGGACAACTTATACCAAAATGAAC 56 18520393 0.907422703 15 52 310 0.92 1.361727836 0.12 0.232142857 0.426666667 56 4 2 69 X:18520300-18520405 6 25.5 3417 FBgn0027087 817.9566667 44.05 67.41 0.031175246 0.578887628 0.378282154 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 1852482 1852487 + X_1852482_1852487_+ 0.587314728 0.979551745 0.783433237 0.277353443 CG42666 FBtr0332901|FBtr0332901|FBtr0332901|FBtr0302657|FBtr0302657|FBtr0302657|FBtr0302656|FBtr0302656|FBtr0302656|FBtr0302655|FBtr0302655|FBtr0302655|FBtr0309968|FBtr0309968|FBtr0309968|FBtr0309967|FBtr0309967|FBtr0309967|FBtr0309969|FBtr0309969|FBtr0309969|FBtr0302654|FBtr0302654|FBtr0302654|FBtr0302658|FBtr0302658|FBtr0302658|FBtr0309966|FBtr0309966|FBtr0309966|FBtr0302659|FBtr0302659|FBtr0302659 1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459 1853667|1853667|1853667|1852866|1852866|1852866|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1853667|1853667|1853667 X + 1852426 1852619 stop_codon CG42666 FlyBase G58062.1 GTGAGCTGGATCCCGCTTGGAGCTGGGACGATTAGAGGACTCGTTCGGGTGCGAATCTGTGACATTTGGGGTGGGGTGGGGCATTGGGGGATGGGCAGCAAGTACTTTTAGTTGTTAAGCCAGCTCGTAATAGTACTGTATTCAAAAAGAAAAACACAATCGTAAAATCTCAGCTGGGTATCTCTCCTGGCAAT 133 1852481 0.813179732 34 113 825 0.871794872 1.531478917 0.384615385 0.165413534 0.288461538 133 17 3 136 X:1852426-1852619 6 CG42666 FBtr0309967|FBtr0309967|FBtr0309967|FBtr0309969|FBtr0309969|FBtr0309969|FBtr0302655|FBtr0302655|FBtr0302655|FBtr0309968|FBtr0309968|FBtr0309968|FBtr0302657|FBtr0302657|FBtr0302657|FBtr0332901|FBtr0332901|FBtr0332901|FBtr0302659|FBtr0302659|FBtr0302659|FBtr0309966|FBtr0309966|FBtr0309966|FBtr0302656|FBtr0302656|FBtr0302656|FBtr0302658|FBtr0302658|FBtr0302658|FBtr0302654|FBtr0302654|FBtr0302654 1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459|1852459 1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852866|1852866|1852866|1853667|1853667|1853667|1853667|1853667|1853667|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933|1852933 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X + 1852428 1852619 stop_codon CG42666 FlyBase G43925.1 GAGCTGGATCCCGCTTGGAGCTGGGACGATTAGAGGACTCGTTCGGGTGCGAATCTGTGACATTTGGGGTGGGGTGGGGCATTGGGGGATGGGCAGCAAGTACTTTTAGTTGTTAAGCCAGCTCGTAATAGTACTGTATTCAAAAAGAAAAACACAATCGTAAAATCTCAGCTGGGTATCTCTCCTGGCAAT 89 1852481 0.981583078 24 77 555 0.888888889 1.630088715 0.243055556 0.449438202 0.659722222 89 14 2 128 X:1852428-1852619 6 41 3418 FBgn0261548 1054.043333 36.35 55.79666667 0.038897832 1.127922971 0.734810921 1 1 1 0.2 dme-miR-12-5p 6mer2-7 ATACTC X 1853220 1853225 + X_1853220_1853225_+ 0.560870629 0.744343009 0.652606819 0.129734578 CG42666 FBtr0332901|FBtr0302659 1852459|1852459 1853667|1853667 X + 1853196 1853234 3'utr CG42666 FlyBase G58065.1 TTTTTTTAACGAATAAAGCATCTCATACTCGTATACAAA 17 1853221 0.747268691 3 17 91 1 1.322219295 0 0.235294118 0.380952381 17 0 0 21 X:1853196-1853234 6 CG42666 FBtr0332901|FBtr0302659 1852459|1852459 1853667|1853667 ATACTC 6mer2-7 dme-miR-12-5p X + 1853196 1853230 3'utr CG42666 FlyBase G43929.1 TTTTTTTAACGAATAAAGCATCTCATACTCGTATA 9 1853221 0.741003281 2 9 53 1 1.146128036 0.071428571 0.444444444 0.642857143 9 0 0 14 X:1853196-1853230 6 13 3419 FBgn0261548 1054.043333 36.35 55.79666667 0.012333459 0.357634113 0.232988828 -1 -1 -1 0.2 dme-miR-276a-3p 7mer-A1 GTTCCTA X 1853525 1853531 + X_1853525_1853531_+ 0.533341253 0.576211941 0.554776597 0.030314092 CG42666 FBtr0332901|FBtr0302659 1852459|1852459 1853667|1853667 X + 1853499 1853551 3'utr CG42666 FlyBase G58068.1 GAGGAGCACTTTAATTGAAAATCGATGTTCCTAGCAGAATAAGTTTCAGCACA 53 1853524 0.949692328 2 52 278 0.985074627 1.819543936 0.447761194 0.188679245 0.358208955 53 1 0 66 X:1853499-1853551 7 CG42666 FBtr0332901|FBtr0302659 1852459|1852459 1853667|1853667 GTTCCTA 7mer-A1 dme-miR-276a-3p X + 1853511 1853550 3'utr CG42666 FlyBase G43930.1 AATTGAAAATCGATGTTCCTAGCAGAATAAGTTTCAGCAC 38 1853524 0.726038478 4 37 199 0.983333333 1.469822016 0.4 0.421052632 0.633333333 38 0 1 59 X:1853511-1853550 7 45 3420 FBgn0261548 1054.043333 36.35 55.79666667 0.042692742 1.237964237 0.806499791 1 1 1 0.2 dme-miR-13b-2-5p 6mer3-8 TTTGAC X 18571344 18571349 + X_18571344_18571349_+ 0.554599948 0.491338616 0.522969282 0.044732494 Bx FBtr0340365|FBtr0340364|FBtr0340366|FBtr0340363|FBtr0340367 18570935|18570935|18570935|18570935|18571268 18571726|18571726|18572809|18571726|18571726 X + 18571197 18571367 stop_codon Bx FlyBase G62666.1 AGGAGGAGGAGGCGTTGGCAGCATCGGAAGCGGCTGCAAGCGCTACCAAAGAAAGTTTTACAACCGCAACTGAGGAAATCGACGGGCGAGAAAACGCTAGCGGAAAGGATGCAGAAATCCAGAATCGATATTCAAATCTTCGTTTGCTTTGACTGAGTTCAAGTTTTATAG 39 18571345 0.986008934 17 35 277 0.880952381 1.568201724 0.119047619 0.076923077 0.142857143 39 5 0 37 X:18571197-18571367 6 Bx FBtr0340366|FBtr0340363|FBtr0340365|FBtr0340364|FBtr0340367 18570935|18570935|18570935|18570935|18571268 18572809|18571726|18571726|18571726|18571726 TTTGAC 6mer3-8 dme-miR-13b-2-5p X + 18571328 18571376 3'utr Bx FlyBase G47281.1 TCAAATCTTCGTTTGCTTTGACTGAGTTCAAGTTTTATAGTTTTAAAGG 15 18571346 0.968178929 4 12 169 0.863636364 0.801632346 0.090909091 0.333333333 0.545454545 15 1 2 19 X:18571328-18571376 6 18 3421 FBgn0265598 121.1466667 5.323333333 8.24 0.148580233 3.381340013 2.184466019 -1 -2 -1.5 0.2 dme-miR-13b-2-5p 6mer2-7 TTGACG X 18571554 18571559 + X_18571554_18571559_+ 0.633377565 0.553843991 0.593610778 0.056238748 Bx FBtr0340365|FBtr0340364|FBtr0340366|FBtr0340363|FBtr0340367 18570935|18570935|18570935|18570935|18571268 18571726|18571726|18572809|18571726|18571726 X + 18571519 18571574 3'utr Bx FlyBase G62668.1 CCACTACATACTGTACATATTTTCCTTGTAAACTGTTGACGTATTAGCGGGATCCT 12 18571555 0.984178398 4 12 98 1 1.079181246 0.083333333 0 0 12 0 0 12 X:18571519-18571574 6 Bx FBtr0340366|FBtr0340363|FBtr0340365|FBtr0340364|FBtr0340367 18570935|18570935|18570935|18570935|18571268 18572809|18571726|18571726|18571726|18571726 TTGACG 6mer2-7 dme-miR-13b-2-5p X + 18571541 18571575 3'utr Bx FlyBase G47282.1 TCCTTGTAAACTGTTGACGTATTAGCGGGATCCTT 5 18571555 0.974366194 2 5 43 1 0.903089987 0.625 0.6 0.75 5 0 0 8 X:18571541-18571575 6 7.5 3422 FBgn0265598 121.1466667 5.323333333 8.24 0.061908431 1.408891672 0.910194175 -1 -1 -1 0.2 dme-bantam-3p 7mer-A1 GATCTCA X 1862231 1862237 - X_1862231_1862237_- 0.820264632 0.82189765 0.821081141 0.001154705 CG14814 FBtr0070369|FBtr0070370|FBtr0339494 1862133|1862133|1862007 1862327|1862327|1862327 X - 1862212 1862272 3'utr CG14814 FlyBase G64071.1 TGGTATATCATAGACAATTTGAAAAACTTAACTGAGATCTCAGTTCGTGCGAAGTAGTAGA 12 1862240 0.973021708 4 12 80 1 1.146128036 0.142857143 0.166666667 0.285714286 12 0 0 14 X:1862212-1862272 7 CG14814 FBtr0339494|FBtr0070370|FBtr0070369 1862007|1862133|1862133 1862327|1862327|1862327 GATCTCA 7mer-A1 dme-bantam-3p X - 1862222 1862253 3'utr CG14814 FlyBase G48303.1 TGAAAAACTTAACTGAGATCTCAGTTCGTGCG 5 1862240 0.706221503 2 5 32 1 0.77815125 0 0.2 0.333333333 5 0 0 6 X:1862222-1862253 7 7 3423 FBgn0023515 470.3333333 16.16 24.75 0.014883062 0.433168317 0.282828283 3 3 3 0.2 dme-miR-999-3p 7mer-A1 GTTAACA X 18624336 18624342 - X_18624336_18624342_- 0.811413913 0.804653268 0.80803359 0.004780466 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 X - 18624265 18624364 3'utr wgn FlyBase G68734.1 AACGCATATAGACGCACGTATTGTTAACATCACCCATATCCCATATCCTAGTACTAGTATCCAGAGTAAACAGTATCCTATAATCCCACCAACAACACAC 18 18624341 0.978538704 9 16 103 0.894736842 1.230448921 0 0.055555556 0.105263158 18 2 0 17 X:18624265-18624364 7 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 GTTAACA 7mer-A1 dme-miR-999-3p X - 18624314 18624363 3'utr wgn FlyBase G51702.1 ACGCATATAGACGCACGTATTGTTAACATCACCCATATCCCATATCCTAG 15 18624342 0.985775645 5 13 102 0.882352941 0.875061263 0 0.133333333 0.235294118 15 1 1 15 X:18624314-18624363 7 12 3424 FBgn0030941 765.4933333 38.51666667 59.04666667 0.015676165 0.31155344 0.203229084 -1 0 -0.5 0.2 dme-miR-190-5p 8mer-A1 ACATATCA X 18624381 18624388 - X_18624381_18624388_- 0.57820075 0.612594431 0.595397591 0.024319948 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 X - 18624365 18624426 3'utr wgn FlyBase G68735.1 ATCGTTGCGGAGTGGAACGAAACCAAGTAATATTGGCAACATATCAGCTTCTATATGCATGG 14 18624394 0.987569503 8 10 114 0.705882353 1.079181246 0.058823529 0.214285714 0.352941176 14 5 0 12 X:18624365-18624426 8 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 ACATATCA 8mer-A1 dme-miR-190-5p X - 18624366 18624407 3'utr wgn FlyBase G51703.1 AAACCAAGTAATATTGGCAACATATCAGCTTCTATATGCATG 7 18624398 0.851995796 6 7 52 1 1.079181246 0 0.428571429 0.666666667 7 0 0 12 X:18624366-18624407 8 9.5 3425 FBgn0030941 765.4933333 38.51666667 59.04666667 0.012410297 0.246646473 0.160889692 6 10 8 0.2 dme-miR-2a-2-5p 7mer-m1 GATGAGG X 18624546 18624552 - X_18624546_18624552_- 0.656929435 0.61698519 0.636957312 0.028244815 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 X - 18624454 18624599 3'utr wgn FlyBase G68736.1 TGGGAATCCCGAGCGATGCGGCAAAATGTTTTGTACATACTCGTAGAGATGAGGCATGTGGCACCGCCCACGTATACCCACGTATATGATAGAAGCGATTTAGATTAACAAATCTCTACTTAATGTAAATATTAAGGCGATCGAAC 153 18624550 0.912189723 20 146 744 0.952095808 1.599337133 0.191616766 0.091503268 0.167664671 153 5 3 159 X:18624454-18624599 7 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 GATGAGG 7mer-m1 dme-miR-2a-2-5p X - 18624474 18624652 3'utr wgn FlyBase G51704.1 TGTTGACTTGTTTGTAATGCGCGGACAGTTGAGGACGCGGGCTTCCCGTTGTGTGGGAATCCCGAGCGATGCGGCAAAATGTTTTGTACATACTCGTAGAGATGAGGCATGTGGCACCGCCCACGTATACCCACGTATATGATAGAAGCGATTTAGATTAACAAATCTCTACTTAATGT 124 18624550 0.924158568 21 121 586 0.983783784 2.260071388 0.308108108 0.379032258 0.583783784 124 3 0 182 X:18624474-18624652 7 101 3426 FBgn0030941 765.4933333 38.51666667 59.04666667 0.131941058 2.622241454 1.71051146 -2 -2 -2 0.2 dme-miR-305-5p 7mer-A1 GTACAAA X 18624777 18624783 - X_18624777_18624783_- 0.77698441 0.777504202 0.777244306 0.000367554 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 X - 18624707 18624833 3'utr wgn FlyBase G68738.1 ACGATACGCAAACGGAACCGGAAACGTAAATGGATTAGAGAAAGAACTTTGTACAAACAGCCGCTTAAAAGTAGGAGGAGGACGGAGGAAGGAAACCGAAACTATTATTATTTTTTATATTATTAAT 192 18624785 0.949667208 10 183 734 0.956896552 2.045322979 0.211206897 0.171875 0.314655172 192 9 1 222 X:18624707-18624833 7 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 GTACAAA 7mer-A1 dme-miR-305-5p X - 18624727 18624862 3'utr wgn FlyBase G51705.1 GCGGGACGAAGCGAGAATGGATCCGGAACACGATACGCAAACGGAACCGGAAACGTAAATGGATTAGAGAAAGAACTTTGTACAAACAGCCGCTTAAAAGTAGGAGGAGGACGGAGGAAGGAAACCGAAACTATTA 161 18624785 0.931806281 12 153 561 0.94893617 2.047274867 0.293617021 0.354037267 0.557446809 161 11 1 223 X:18624727-18624862 7 152.5 3427 FBgn0030941 765.4933333 38.51666667 59.04666667 0.199217934 3.959324968 2.582702947 2 2 2 0.2 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA X 18635679 18635684 - X_18635679_18635684_- 0.999881944 0.979993417 0.98993768 0.014063293 Rip11 FBtr0343020|FBtr0343020|FBtr0343021|FBtr0343021|FBtr0301545|FBtr0301545|FBtr0343019|FBtr0343019|FBtr0074616|FBtr0074616 18635640|18635640|18635640|18635640|18635640|18635640|18635640|18635640|18635640|18635640 18636833|18636833|18636312|18636312|18636312|18636312|18636833|18636833|18637354|18637354 X - 18635667 18635717 3'utr Rip11 FlyBase G68744.1 CACAGTTGAAATATGTTGATACTACAATGATTTTACTTATTGATATAAACG 20 18635689 0.745427231 11 17 180 0.863636364 1.278753601 0.318181818 0.1 0.181818182 20 3 0 19 X:18635667-18635717 6 Rip11 FBtr0074616|FBtr0074616|FBtr0343019|FBtr0343019|FBtr0301545|FBtr0301545|FBtr0343021|FBtr0343021|FBtr0343020|FBtr0343020 18635640|18635640|18635640|18635640|18635640|18635640|18635640|18635640|18635640|18635640 18637354|18637354|18636833|18636833|18636312|18636312|18636312|18636312|18636833|18636833 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" X - 18635660 18635720 3'utr Rip11 FlyBase G51709.1 ACACACAGTTGAAATATGTTGATACTACAATGATTTTACTTATTGATATAAACGCAAGCAA 12 18635690 0.978335919 7 12 99 1 1.278753601 0 0.5 0.684210526 12 0 0 19 X:18635660-18635720 6 8.5 3428 FBgn0027335 6668.076667 280.47 431.2966667 0.00127473 0.030306272 0.019708012 5 6 5.5 0.2 dme-miR-317-3p 6mer3-8 TGTGTT X 18635907 18635912 - X_18635907_18635912_- 0.617966823 0.956994802 0.787480812 0.239728998 Rip11 FBtr0343020|FBtr0343021|FBtr0301545|FBtr0343019|FBtr0074616 18635640|18635640|18635640|18635640|18635640 18636833|18636312|18636312|18636833|18637354 X - 18635896 18635968 3'utr Rip11 FlyBase G68746.1 AAGCGATTTGTCGTGTTGCGAGTCCTTGTCAATTGATTGAAATTATCCGAAAGTATTGTGTTTGTTTTTTTGT 15 18635913 0.829821829 9 15 139 1 1.255272505 0.111111111 0.2 0.333333333 15 0 0 18 X:18635896-18635968 6 Rip11 FBtr0074616|FBtr0343019|FBtr0301545|FBtr0343021|FBtr0343020 18635640|18635640|18635640|18635640|18635640 18637354|18636833|18636312|18636312|18636833 TGTGTT 6mer3-8 dme-miR-317-3p X - 18635902 18635961 3'utr Rip11 FlyBase G51711.1 TTGTCGTGTTGCGAGTCCTTGTCAATTGATTGAAATTATCCGAAAGTATTGTGTTTGTTT 14 18635926 0.984816777 7 14 115 1 1.342422681 0.227272727 0.428571429 0.636363636 14 0 0 22 X:18635902-18635961 6 8 3429 FBgn0027335 6668.076667 280.47 431.2966667 0.001199746 0.02852355 0.018548717 1 14 7.5 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA X 18636806 18636813 - X_18636806_18636813_- 0.58449527 0.602578973 0.593537121 0.012787107 Rip11 FBtr0343020|FBtr0343019|FBtr0074616 18635640|18635640|18635640 18636833|18636833|18637354 X - 18636755 18636833 5'utr Rip11 FlyBase G68750.1 GTGCTGCGCATGTTGCAAATTGCATTTAAGTAGACACTTAACCAACAAATCCCAACAACAACAACATCACCACCACCAA 47 18636814 0.983310187 5 45 344 0.981818182 1.73239376 0.309090909 0.170212766 0.290909091 47 1 0 54 X:18636755-18636833 8 Rip11 FBtr0074616|FBtr0343019|FBtr0343020 18635640|18635640|18635640 18637354|18636833|18636833 TGCATTTA 8mer-A1 dme-miR-277-3p X - 18636784 18636835 stop_codon Rip11 FlyBase G51716.1 AAGTGCTGCGCATGTTGCAAATTGCATTTAAGTAGACACTTAACCAACAAAT 27 18636814 0.844795357 4 25 202 0.973684211 1.568201724 0.421052632 0.37037037 0.552631579 27 1 0 37 X:18636784-18636835 8 35.5 3430 FBgn0027335 6668.076667 280.47 431.2966667 0.005323874 0.126573252 0.082309934 1 1 1 0.2 dme-miR-283-5p 6mer3-8 TGATAT X 18653779 18653784 - X_18653779_18653784_- 0.999997094 0.999939698 0.999968396 4.06E-05 CG6659 FBtr0074613|FBtr0074612 18653390|18653390 18653985|18653985 X - 18653741 18653818 3'utr CG6659 FlyBase G68779.1 AATCCCAAATCCCGATCCCGCGTAGTAGCTGATTTGATATGGCAGATTGGCGATTAGAAGGAGGCCCCTTCCGCTAGA 10 18653772 0.958460538 6 10 49 1 1.041392685 0.363636364 0.1 0.181818182 10 0 0 11 X:18653741-18653818 6 CG6659 FBtr0074613|FBtr0074612 18653390|18653390 18653985|18653985 TGATAT 6mer3-8 dme-miR-283-5p X - 18653743 18653844 3'utr CG6659 FlyBase G51741.1 CGGATGCCCGAACACATCTCGCACCCAATCCCAAATCCCGATCCCGCGTAGTAGCTGATTTGATATGGCAGATTGGCGATTAGAAGGAGGCCCCTTCCGCTA 8 18653779 0.974690541 7 8 41 1 1.204119983 0.125 0.625 0.8125 8 0 0 16 X:18653743-18653844 6 4 3431 FBgn0030946 482.2966667 17.24333333 26.43666667 0.008293651 0.23197371 0.151305006 -12 -5 -8.5 0.2 dme-miR-1008-3p 7mer-m8 AGCTGTG X 18653909 18653915 - X_18653909_18653915_- 0.605327413 0.628752973 0.617040193 0.016564401 CG6659 FBtr0074613|FBtr0074612 18653390|18653390 18653985|18653985 X - 18653831 18653992 stop_codon CG6659 FlyBase G68780.1 CATATAGGGCTGGCCGTCCACGGAGGCGGCGCGATGATGGAATGCTGGAATCGTGTTGTGTTGTACGTAGCTGTGTGAGCTGTGTGACTAGGATTTAGCATTTTACGATGTGTGTGTATTATGATTACGTTTAGTATTGCCCCAACCTCGGATGCCCGAACA 45 18653917 0.882371976 19 41 353 0.92 1.662757832 0.22 0.111111111 0.2 45 4 0 46 X:18653831-18653992 7 CG6659 FBtr0074613|FBtr0074612 18653390|18653390 18653985|18653985 AGCTGTG 7mer-m8 dme-miR-1008-3p X - 18653857 18654001 stop_codon CG6659 FlyBase G51742.1 CGAGATGTCCATATAGGGCTGGCCGTCCACGGAGGCGGCGCGATGATGGAATGCTGGAATCGTGTTGTGTTGTACGTAGCTGTGTGAGCTGTGTGACTAGGATTTAGCATTTTACGATGTGTGTGTATTATGATTACGTTTAGTA 43 18653917 0.982407413 15 40 306 0.954545455 1.799340549 0.303030303 0.348837209 0.575757576 43 3 0 63 X:18653857-18654001 7 26 3432 FBgn0030946 482.2966667 17.24333333 26.43666667 0.053908728 1.507829113 0.983482537 2 2 2 0.2 dme-miR-92b-3p 6mer3-8 GTGCAA X 18661019 18661024 + X_18661019_18661024_+ 0.923476534 0.999999976 0.961738255 0.054110286 fu FBtr0074602 18660455 18661204 X + 18661004 18661049 3'utr fu FlyBase G62688.1 ATTCAAGTGTGGTTTGTGCAAAATAGATTGATAGCATTATAGTTTG 10 18661017 0.72867858 3 8 86 0.909090909 1 0.181818182 0.1 0.181818182 10 1 0 10 X:18661004-18661049 6 fu FBtr0074602 18660455 18661204 GTGCAA 6mer3-8 dme-miR-92b-3p X + 18661002 18661058 3'utr fu FlyBase G47299.1 ATATTCAAGTGTGGTTTGTGCAAAATAGATTGATAGCATTATAGTTTGTATATCGAA 12 18661016 0.84731103 6 11 110 0.947368421 1.255272505 0.421052632 0.333333333 0.578947368 12 1 0 18 X:18661002-18661058 6 8.5 3433 FBgn0001079 159.36 5.946666667 9.103333333 0.053338353 1.429372197 0.933723911 2 3 2.5 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 18781249 18781254 + X_18781249_18781254_+ 0.999989801 0.999997098 0.999993449 5.16E-06 CG6891 FBtr0074631|FBtr0334453|FBtr0074632 18781193|18781193|18781193 18781345|18781345|18781345 X + 18781229 18781320 3'utr CG6891 FlyBase G62699.1 TTTGCAACTCTTAACTGCTTACCAAACTGCTCCTTTCTCTTTAATTATTATGAATTAATTTTATGAAATTTAAAAACTGTACATTTTATGAA 47 18781263 0.788561177 13 40 418 0.859649123 1.088136089 0.087719298 0.14893617 0.298245614 47 5 3 49 X:18781229-18781320 6 CG6891 FBtr0334453|FBtr0074632|FBtr0074631 18781193|18781193|18781193 18781345|18781345|18781345 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 18781239 18781283 3'utr CG6891 FlyBase G47310.1 TTAACTGCTTACCAAACTGCTCCTTTCTCTTTAATTATTATGAAT 33 18781257 0.721924709 8 32 306 0.977272727 1.33243846 0.022727273 0.272727273 0.454545455 33 0 1 43 X:18781239-18781283 6 34.5 3434 FBgn0030955 851.42 106.5933333 161.8266667 0.040520542 0.323660016 0.213191069 -14 -8 -11 0.2 dme-miR-986-5p 7mer-m8 ATTCGAG X 18786361 18786367 - X_18786361_18786367_- 0.612532264 0.326949599 0.469740931 0.201937464 CG6961 FBtr0074660 18786140 18786460 X - 18786333 18786376 3'utr CG6961 FlyBase G68801.2 GCTTATAAAATTCGAGTCGATCCATCCAGCGTATGTTTAGCAAA 10 18786366 0.767929484 5 10 55 1 1.041392685 0.727272727 0.1 0.181818182 10 0 0 11 X:18786333-18786376 7 CG6961 FBtr0074660 18786140 18786460 ATTCGAG 7mer-m8 dme-miR-986-5p X - 18786340 18786390 3'utr CG6961 FlyBase G51753.1 CATTTTCATTTCGCGCTTATAAAATTCGAGTCGATCCATCCAGCGTATGTT 8 18786376 0.758290143 4 7 69 0.888888889 0.602059991 0.111111111 0.125 0.222222222 8 0 1 8 X:18786340-18786390 7 8.5 3435 FBgn0030959 210.0433333 13.48333333 20.56333333 0.04046784 0.630407911 0.413357108 -1 9 4 0.2 dme-miR-252-5p 6mer3-8 GTACTT X 18793314 18793319 + X_18793314_18793319_+ 0.733217774 0.713178119 0.723197947 0.014170208 Atg101 FBtr0074635 18792553 18793517 X + 18793253 18793405 3'utr Atg101 FlyBase G62716.1 TGTTTAGATCGAGGCAAGTAGCGGTGAGGCGGTAGAAATGTATGTATAAAAGATTGTGATTGTACTTGTAGTGATTAAACTATAGTACGGACTCCATGTATCCATGGATATCCAATATGTAGACATGTATGTATGTAAATCAATGTTTATCTA 428 18793313 0.99077693 22 402 4174 0.941176471 1.490426721 0.348884381 0.140186916 0.253549696 428 15 14 464 X:18793253-18793405 6 Atg101 FBtr0074635 18792553 18793517 GTACTT 6mer3-8 dme-miR-252-5p X + 18793255 18793389 3'utr Atg101 FlyBase G47323.1 TTTAGATCGAGGCAAGTAGCGGTGAGGCGGTAGAAATGTATGTATAAAAGATTGTGATTGTACTTGTAGTGATTAAACTATAGTACGGACTCCATGTATCCATGGATATCCAATATGTAGACATGTATGTATGTA 347 18793313 0.990353791 18 328 3332 0.940740741 1.927712462 0.368518519 0.409221902 0.62037037 347 27 5 508 X:18793255-18793389 6 372.5 3436 FBgn0030960 179.3333333 11.9 18.35333333 2.077137546 31.30252101 20.29604068 1 1 1 0.2 dme-miR-252-5p 6mer3-8 GTACTT X 18793437 18793442 + X_18793437_18793442_+ 0.853130063 0.724326849 0.788728456 0.091077687 Atg101 FBtr0074635 18792553 18793517 X + 18793428 18793468 3'utr Atg101 FlyBase G62717.1 ACGATAAATGTACTTTACGACTTAACTAATATTGTAAAATC 17 18793442 0.736639763 6 16 125 1 1.255272505 0.055555556 0.058823529 0.111111111 17 0 0 18 X:18793428-18793468 6 Atg101 FBtr0074635 18792553 18793517 GTACTT 6mer3-8 dme-miR-252-5p X + 18793427 18793454 3'utr Atg101 FlyBase G47324.1 AACGATAAATGTACTTTACGACTTAACT 6 18793441 0.796787092 3 6 41 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 X:18793427-18793454 6 10.5 3437 FBgn0030960 179.3333333 11.9 18.35333333 0.058550186 0.882352941 0.57210316 -5 -4 -4.5 0.2 dme-miR-184-5p 8mer-m1 TGATAAGG X 1881446 1881453 - X_1881446_1881453_- 0.614423637 0.604772039 0.609597838 0.006824712 trr FBtr0070362|FBtr0070363 1881311|1881311 1882155|1882155 X - 1881418 1881483 3'utr trr FlyBase G64099.1 TCGTGCGCAACCTTCTTTGAATATATACACTGATAAGGATATGAACACCTACTTCTATTTTATTTT 21 1881460 0.961421611 9 20 159 0.958333333 1.361727836 0.25 0.142857143 0.25 21 1 0 23 X:1881418-1881483 8 trr FBtr0070362|FBtr0070363 1881311|1881311 1882155|1882155 TGATAAGG 8mer-m1 dme-miR-184-5p X - 1881430 1881477 3'utr trr FlyBase G48319.1 GCAACCTTCTTTGAATATATACACTGATAAGGATATGAACACCTACTT 15 1881459 0.954735205 6 13 96 0.818181818 0.954242509 0.318181818 0.4 0.590909091 15 3 1 18 X:1881430-1881477 8 14 3438 FBgn0023518 907.1566667 13.24 20.31 0.015432836 1.057401813 0.689315608 7 6 6.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA X 18831927 18831933 + X_18831927_18831933_+ 0.790801975 0.757504777 0.774153376 0.023544676 CG7101 FBtr0074639 18831799 18832123 X + 18831868 18831974 3'utr CG7101 FlyBase G62725.1 ATACTTAAGCAATGGATAAATGTAACGTTTTAATAGCGTTAATATTTTGAATTTATATCCTAGTCATCGGAAATGTTTTTCCAAACGAACTTGAATTTAAAATCGTA 150 18831925 0.884279782 16 145 1192 0.964071856 2.206825876 0.233532934 0.093333333 0.185628743 150 6 0 161 X:18831868-18831974 7 CG7101 FBtr0074639 18831799 18832123 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X + 18831752 18831972 stop_codon CG7101 FlyBase G47329.1 CTTCCGGGCCATCGATCTCGAACGGCATGTGTGTGAGGAACATCCGTAGGGCAGTCAACCTAGCCGGAATCGTAGATACCTGAGCGACATCTCACGTCCAGAACTACGATTAATATATACTTAAGCAATGGATAAATGTAACGTTTTAATAGCGTTAATATTTTGAATTTATATCCTAGTCATCGGAAATGTTTTTCCAAACGAACTTGAATTTAAAATCG 153 18831925 0.983825919 29 132 1005 0.884057971 1.359361103 0.289855072 0.296052632 0.483091787 152 17 7 183 X:18831752-18831972 7 113.5 3439 FBgn0030963 43.33333333 3.66 5.636666667 2.619230769 31.01092896 20.13601419 2 2 2 0.2 dme-miR-252-5p 7mer-m8 GTACTTA X 18832091 18832097 + X_18832091_18832097_+ 0.491487765 0.529015497 0.510251631 0.026536091 CG7101 FBtr0074639 18831799 18832123 X + 18831986 18832115 3'utr CG7101 FlyBase G62726.1 GCTGTAAAATTAATGCTTATGAGACGATTTACATTTACATCTTAGGAACTATAGACATAAGCGAATAGTTACTTTAATATAGCAAGCAGATGGCTGAAAGACAATGTACTTATATGAATAAAAAAATATC 186 18832090 0.881927067 14 179 1100 0.966346154 2.002166062 0.240384615 0.107526882 0.201923077 186 6 1 201 X:18831986-18832115 7 CG7101 FBtr0074639 18831799 18832123 GTACTTA 7mer-m8 dme-miR-252-5p X + 18832056 18832110 3'utr CG7101 FlyBase G47330.1 ACTTTAATATAGCAAGCAGATGGCTGAAAGACAATGTACTTATATGAATAAAAAA 120 18832090 0.867756336 8 116 656 0.975490196 2.298853076 0.205882353 0.408333333 0.651960784 120 5 0 199 X:18832056-18832110 7 120 3440 FBgn0030963 43.33333333 3.66 5.636666667 2.769230769 32.78688525 21.289178 1 1 1 0.2 dme-miR-307a-3p 7mer-m8 GGTTGTG X 18841222 18841228 + X_18841222_18841228_+ 0.455753674 0.695508909 0.575631291 0.169532528 Pvf1 FBtr0343604 18841137 18842901 X + 18841157 18841373 3'utr Pvf1 FlyBase G62736.1 CAGGGATCCACGGGCAGGGATTGGTTGCGATCCGGTCTGGTCTGATCTGGTCTGGTCTGGGGAACGGTTGTGCTCGTCCTTGGTTGGTTTGCGGTTGGTTCCTGGTGGTGGCTCCCTAGCTTAAGCTGTCCCAACAAGTTCCTCGCTTATTTATTATAGCCATTTCGTACAGTTGATAGTTTTCTGGCAAATAATAGAATTACTTAATAGAATTTAA 93 18841213 0.98972878 38 87 760 0.943396226 1.397940009 0.377358491 0.129032258 0.235849057 93 3 3 100 X:18841157-18841373 7 Pvf1 FBtr0343604 18841137 18842901 GGTTGTG 7mer-m8 dme-miR-307a-3p X + 18841184 18841273 3'utr Pvf1 FlyBase G47336.1 CGATCCGGTCTGGTCTGATCTGGTCTGGTCTGGGGAACGGTTGTGCTCGTCCTTGGTTGGTTTGCGGTTGGTTCCTGGTGGTGGCTCCCT 31 18841225 0.740815313 17 28 241 0.895833333 1.33243846 0.5625 0.419354839 0.625 31 4 1 43 X:18841184-18841273 7 20 3441 FBgn0030964 2.333333333 0.133333333 0.206666667 8.571428571 150 96.77419355 9 -3 3 0.2 dme-miR-8-3p 7mer-A1 AGTATTA X 18841758 18841764 + X_18841758_18841764_+ 0.823258824 0.776425963 0.799842394 0.03311579 Pvf1 FBtr0343604 18841137 18842901 X + 18841716 18841788 3'utr Pvf1 FlyBase G62738.1 ACTTCTGTTTCTTTTGTGTTTCGTTTTAGATTAAAAATGTCGAGTATTATTCTTAGAGTCCACAAAAAAAAAA 17 18841753 0.988638716 6 17 164 1 1.278753601 0.105263158 0.117647059 0.210526316 17 0 0 19 X:18841716-18841788 7 Pvf1 FBtr0343604 18841137 18842901 AGTATTA 7mer-A1 dme-miR-8-3p X + 18841708 18841765 3'utr Pvf1 FlyBase G47338.1 ATGTTTTTACTTCTGTTTCTTTTGTGTTTCGTTTTAGATTAAAAATGTCGAGTATTAT 5 18841753 0.986884832 3 5 54 1 0.77815125 0 0.2 0.333333333 5 0 0 6 X:18841708-18841765 7 9.5 3442 FBgn0030964 2.333333333 0.133333333 0.206666667 4.071428571 71.25 45.96774194 5 5 5 0.2 dme-miR-8-3p 7mer-A1 AGTATTA X 18861866 18861872 - X_18861866_18861872_- 0.57211094 0.654736209 0.613423574 0.05842491 CG7326 FBtr0074653|FBtr0333159 18861558|18861195 18862233|18862233 X - 18861838 18861878 3'utr CG7326 FlyBase G68814.1 GCAACAAGTATTAGCTGGATAAACGACTTCTATATATATGT 5 18861868 0.963782656 3 4 25 1 0.84509804 0.571428571 0.4 0.571428571 5 0 0 7 X:18861838-18861878 7 CG7326 FBtr0074653|FBtr0333159 18861558|18861195 18862233|18862233 AGTATTA 7mer-A1 dme-miR-8-3p X - 18861832 18861883 3'utr CG7326 FlyBase G51764.1 GTTTTGCAACAAGTATTAGCTGGATAAACGACTTCTATATATATGTATGTAC 8 18861878 0.890229103 6 8 58 1 1.113943352 0.230769231 0.5 0.692307692 8 0 0 13 X:18861832-18861883 7 4.5 3443 FBgn0030970 277.82 13.14 20.1 0.016197538 0.342465753 0.223880597 -4 6 1 0.2 dme-miR-2b-2-5p 7mer-A1 TGAAGAA X 18861952 18861958 - X_18861952_18861958_- 0.823282165 0.573589271 0.698435718 0.176559543 CG7326 FBtr0074653|FBtr0333159 18861558|18861195 18862233|18862233 X - 18861935 18862008 3'utr CG7326 FlyBase G68815.1 GAATTAACAGTACGCGGAATTGATAACGCCAAAGACTATTTATTGTTTTGTGAAGAAAATTTTGATTTTATTGC 14 18861947 0.92902097 9 13 112 0.904761905 1.278753601 0.285714286 0.357142857 0.571428571 14 2 0 19 X:18861935-18862008 7 CG7326 FBtr0074653|FBtr0333159 18861558|18861195 18862233|18862233 TGAAGAA 7mer-A1 dme-miR-2b-2-5p X - 18861919 18861958 3'utr CG7326 FlyBase G51765.1 TGAAGAAAATTTTGATTTTATTGCTTGACTCGATCGTTAT 5 18861946 0.988548577 4 4 47 1 0.84509804 0.142857143 0.4 0.571428571 5 0 0 7 X:18861919-18861958 7 4.5 3444 FBgn0030970 277.82 13.14 20.1 0.016197538 0.342465753 0.223880597 -11 -12 -11.5 0.2 dme-miR-14-3p 7mer-A1 AGACTGA X 18879407 18879413 + X_18879407_18879413_+ 0.819008367 0.821666015 0.820337191 0.001879207 CG34401 FBtr0112653|FBtr0333160 18878120|18878120 18880636|18884075 X + 18879390 18879431 3'utr CG34401 FlyBase G62782.1 GTGCGTGTGAGCATTTTAGACTGAGATATCTGCCAACAACAA 81 18879405 0.674951499 9 81 560 1 1.973127854 0.021276596 0.160493827 0.276595745 81 0 0 94 X:18879390-18879431 7 CG34401 FBtr0333160|FBtr0112653 18878120|18878120 18884075|18880636 AGACTGA 7mer-A1 dme-miR-14-3p X + 18879380 18879468 3'utr CG34401 FlyBase G47365.1 GTGTGTGTGTGTGCGTGTGAGCATTTTAGACTGAGATATCTGCCAACAACAACAAATACCGATGCCCACACACAGGCACACACCCACGC 39 18879405 0.977934613 11 37 251 0.965517241 1.447158031 0 0.384615385 0.586206897 39 1 1 56 X:18879380-18879468 7 57.5 3445 FBgn0085430 1429.756667 16.81 26.06 0.040216634 3.420582986 2.206446662 2 2 2 0.2 dme-miR-317-3p 8mer-A1 TGTGTTCA X 18879539 18879546 + X_18879539_18879546_+ 0.617220831 0.627754567 0.622487699 0.007448521 CG34401 FBtr0112653|FBtr0333160 18878120|18878120 18880636|18884075 X + 18879504 18879664 3'utr CG34401 FlyBase G62784.1 GGAAGTTGGAAAAGCTCTGTTTGATTTTTCAAAAATGTGTTCAGTTAAACTAACGTATTTATAGAGATGATCTATCAAATAGTTTTCTACACCGACAGCTATATGAAAAAGAACTCGGACTTTTACATATATGCTTACGATCCCTAGACCTAACTTTAAAT 53 18879539 0.874685887 18 47 447 0.887096774 1.263241435 0.048387097 0.150943396 0.274193548 53 5 2 55 X:18879504-18879664 8 CG34401 FBtr0333160|FBtr0112653 18878120|18878120 18884075|18880636 TGTGTTCA 8mer-A1 dme-miR-317-3p X + 18879506 18879579 3'utr CG34401 FlyBase G47366.1 AAGTTGGAAAAGCTCTGTTTGATTTTTCAAAAATGTGTTCAGTTAAACTAACGTATTTATAGAGATGATCTATC 25 18879539 0.830932442 9 22 227 0.923076923 1.556302501 0.025641026 0.4 0.615384615 25 3 0 36 X:18879506-18879579 8 21 3446 FBgn0085430 1429.756667 16.81 26.06 0.014687814 1.249256395 0.805832694 0 0 0 0.2 dme-bantam-3p 7mer-A1 GATCTCA X 18879923 18879929 + X_18879923_18879929_+ 0.643939282 0.807130632 0.725534957 0.115393675 CG34401 FBtr0112653|FBtr0333160 18878120|18878120 18880636|18884075 X + 18879912 18879938 3'utr CG34401 FlyBase G62786.1 AACTAGCAAACGATCTCAACTAAAGTA 20 18879915 0.872009704 2 18 61 0.925925926 1.397940009 0.222222222 0.2 0.407407407 20 2 0 25 X:18879912-18879938 7 CG34401 FBtr0333160|FBtr0112653 18878120|18878120 18884075|18880636 GATCTCA 7mer-A1 dme-bantam-3p X + 18879911 18879936 3'utr CG34401 FlyBase G47368.1 CAACTAGCAAACGATCTCAACTAAAG 9 18879915 0.815933272 2 8 26 0.928571429 1.113943352 0.071428571 0.555555556 0.714285714 9 1 0 13 X:18879911-18879936 7 14.5 3447 FBgn0085430 1429.756667 16.81 26.06 0.010141586 0.862581797 0.556408289 8 8 8 0.2 dme-miR-11-3p 8mer-m1 CTGTGATG X 18887517 18887524 + X_18887517_18887524_+ 0.462273897 0.462273677 0.462273787 1.41E-07 CG7332 FBtr0342877|FBtr0074647 18887445|18887445 18888860|18887605 X + 18887481 18887547 3'utr CG7332 FlyBase G62800.1 AGGTGTGCCAGAATCGCATGGAACGGCATGGACATACTGTGATGGAGGAAACACTGATGTAAACAGA 46 18887515 0.957914001 7 40 190 0.884615385 1.361727836 0.403846154 0.130434783 0.230769231 46 5 1 46 X:18887481-18887547 8 CG7332 FBtr0342877|FBtr0074647 18887445|18887445 18888860|18887605 CTGTGATG 8mer-m1 dme-miR-11-3p X + 18887495 18887549 3'utr CG7332 FlyBase G47376.1 CGCATGGAACGGCATGGACATACTGTGATGGAGGAAACACTGATGTAAACAGAAG 34 18887511 0.765145744 5 29 136 0.890625 1.755874856 0.59375 0.558823529 0.765625 34 7 0 57 X:18887495-18887549 8 38 3448 FBgn0030973 1168.416667 41.72 64.31666667 0.032522645 0.910834132 0.590826639 2 6 4 0.2 dme-miR-1012-3p 6mer3-8 TTGACT X 1891898 1891903 - X_1891898_1891903_- 0.518334078 0.605898496 0.562116287 0.061917381 arm FBtr0089990 1891399 1892098 X - 1891787 1891924 stop_codon arm FlyBase G64126.1 TTGATGCCGGTGCATTGAACTTTGACTTGGACGCCATGCCGACGCCACCCAATGACAACAACAACCTGGCTGCCTGGTACGATACCGATTGTTAGACAAGCCGAGCTAAGGGTAAGGGTCGAGTATCCATTCGACCCC 54 1891903 0.879473949 15 51 278 0.936507937 1.293730757 0.19047619 0.166666667 0.285714286 54 2 2 59 X:1891787-1891924 6 arm FBtr0089990 1891399 1892098 TTGACT 6mer3-8 dme-miR-1012-3p X - 1891873 1891959 3'utr arm FlyBase G48336.2 TTCGCCCTATTCCATGGACATGGACGTTGGCGAGATTGATGCCGGTGCATTGAACTTTGACTTGGACGCCATGCCGACGCCACCCAA 27 1891903 0.970933498 7 23 156 0.916666667 1.217483944 0.166666667 0.307692308 0.5 26 2 1 33 X:1891873-1891959 6 23 3449 FBgn0000117 5213.67 200.9433333 306.79 0.00441148 0.11446013 0.074969849 0 0 0 0.2 dme-miR-263a-5p 6mer2-7 TGCCAT X 19025639 19025644 + X_19025639_19025644_+ 0.880240015 0.941983672 0.911111843 0.043659389 CG43759 FBtr0331156|FBtr0332994|FBtr0343982 19013347|19013347|19013347 19026872|19028629|19026872 X + 19025614 19025693 3'utr CG43759 FlyBase G62814.1 GGAATACAATACAAAGACTGCCTCATGCCATGCCATCCACTATTACCACCAACCCAACAGCGGCAGCAGCTATAGCAACT 26 19025644 0.964802389 7 24 114 0.878787879 1.462397998 0.060606061 0.192307692 0.363636364 26 4 0 29 X:19025614-19025693 6 CG43759 FBtr0343982|FBtr0332994|FBtr0331156 19013347|19013347|19013347 19026872|19028629|19026872 TGCCAT 6mer2-7 dme-miR-263a-5p X + 19025614 19025719 3'utr CG43759 FlyBase G47384.1 GGAATACAATACAAAGACTGCCTCATGCCATGCCATCCACTATTACCACCAACCCAACAGCGGCAGCAGCTATAGCAACTACAGTAGCCGTCGTCACCATCAGCAT 23 19025644 0.964634068 7 19 103 0.823529412 0.748188027 0.147058824 0.304347826 0.529411765 23 2 4 28 X:19025614-19025719 6 17.5 3450 FBgn0264090 9.64 0.236666667 0.363333333 1.815352697 73.94366197 48.16513761 -5 -5 -5 0.2 dme-miR-283-5p 8mer-m1 TGATATTT X 19028303 19028310 + X_19028303_19028310_+ 0.517014638 0.538715617 0.527865127 0.015344924 CG43759 FBtr0332994 19013347 19028629 X + 19028285 19028323 3'utr CG43759 FlyBase G62823.1 AACAAAAAGCTTAAAATGTGATATTTTATAAAAACTAAT 9 19028297 0.831170776 4 8 79 0.888888889 0.602059991 0 0 0 9 0 1 8 X:19028285-19028323 8 CG43759 FBtr0332994 19013347 19028629 TGATATTT 8mer-m1 dme-miR-283-5p X + 19028288 19028322 3'utr CG43759 FlyBase G47391.1 AAAAAGCTTAAAATGTGATATTTTATAAAAACTAA 7 19028308 0.670984184 4 6 58 0.818181818 0.954242509 0 0.428571429 0.636363636 7 2 0 9 X:19028288-19028322 8 8 3451 FBgn0264090 9.64 0.236666667 0.363333333 0.829875519 33.8028169 22.01834862 6 -5 0.5 0.2 dme-miR-283-5p 7mer-m8 TGATATT X 19136286 19136292 - X_19136286_19136292_- 0.539875557 0.537018223 0.53844689 0.002020487 RhoGAP18B FBtr0299623 19136105 19143584 X - 19136184 19136311 3'utr RhoGAP18B FlyBase G68832.1 TTACATCGTGTATAAGATGTGATATTCGCTGCAAATCGCAAAGCGTGAATATAATTTGTATTTATACCTATATTAATGAACCATATAAAATATACGAATAAAGTCCAATACAGTAGATAGGCTACACA 108 19136287 0.860845719 15 103 806 0.946153846 1.788875116 0.469230769 0.175925926 0.315384615 108 6 1 123 X:19136184-19136311 7 RhoGAP18B FBtr0299623 19136105 19143584 TGATATT 7mer-m8 dme-miR-283-5p X - 19136251 19136309 3'utr RhoGAP18B FlyBase G51775.2 ACATCGTGTATAAGATGTGATATTCGCTGCAAATCGCAAAGCGTGAATATAATTTGTAT 80 19136287 0.725032888 9 77 588 0.968992248 2.096910013 0.472868217 0.45 0.658914729 80 4 0 125 X:19136251-19136309 7 84.5 3452 FBgn0261461 2047.33 61.32666667 94.48 0.041273268 1.377867159 0.894369179 -5 -5 -5 0.2 dme-miR-34-5p 7mer-m8 CACTGCC X 19136353 19136359 - X_19136353_19136359_- 0.610564775 0.692510578 0.651537677 0.057944431 RhoGAP18B FBtr0299623 19136105 19143584 X - 19136337 19136380 3'utr RhoGAP18B FlyBase G68833.1 ACATTGTGGCGGTACAGTGAGCACTGCCTGCGGCCAACCTAAAA 27 19136352 0.818924862 4 27 112 1 1.505149978 0.4375 0.185185185 0.3125 27 0 0 32 X:19136337-19136380 7 RhoGAP18B FBtr0299623 19136105 19143584 CACTGCC 7mer-m8 dme-miR-34-5p X - 19136336 19136382 3'utr RhoGAP18B FlyBase G51776.1 AAACATTGTGGCGGTACAGTGAGCACTGCCTGCGGCCAACCTAAAAA 25 19136352 0.811062377 4 24 106 0.95 1.579783597 0.4 0.44 0.65 25 2 0 38 X:19136336-19136382 7 26 3453 FBgn0261461 2047.33 61.32666667 94.48 0.012699467 0.423959126 0.275190517 -7 -7 -7 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 19136463 19136468 - X_19136463_19136468_- 0.97560779 0.976497216 0.976052503 0.000628901 RhoGAP18B FBtr0299623 19136105 19143584 X - 19136412 19136509 3'utr RhoGAP18B FlyBase G68834.1 AAATGGGAATTCGCATAGACGAGCCCATCACGAAAATACTTACCAAAAAAGACAGTAGACTAAGTTTATACTAAAGATAATTAGGGGAAACCGCAAGA 289 19136469 0.957733101 11 257 1219 0.887537994 1.766412847 0.285714286 0.131487889 0.237082067 289 33 4 292 X:19136412-19136509 6 RhoGAP18B FBtr0299623 19136105 19143584 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X - 19136412 19136481 3'utr RhoGAP18B FlyBase G51777.1 CACGAAAATACTTACCAAAAAAGACAGTAGACTAAGTTTATACTAAAGATAATTAGGGGAAACCGCAAGA 199 19136469 0.952415018 9 167 757 0.833876221 1.806179974 0.231270358 0.40201005 0.61237785 199 48 3 256 X:19136412-19136481 6 223.5 3454 FBgn0261461 2047.33 61.32666667 94.48 0.109166573 3.644417872 2.365580017 1 1 1 0.2 dme-miR-79-3p 7mer-A1 AGCTTTA X 19136566 19136572 - X_19136566_19136572_- 0.823053866 0.82231677 0.822685318 0.000521208 RhoGAP18B FBtr0299623 19136105 19143584 X - 19136534 19136581 3'utr RhoGAP18B FlyBase G68835.1 TTTGTTGTCAGCTTTAAATGTACGTGTTTTATTGCTAATTTTAATGTT 9 19136568 0.984049746 7 9 92 1 1.230448921 0.058823529 0.444444444 0.705882353 9 0 0 17 X:19136534-19136581 7 RhoGAP18B FBtr0299623 19136105 19143584 AGCTTTA 7mer-A1 dme-miR-79-3p X - 19136533 19136579 3'utr RhoGAP18B FlyBase G51778.1 TGTTGTCAGCTTTAAATGTACGTGTTTTATTGCTAATTTTAATGTTC 7 19136575 0.995096408 5 5 64 0.636363636 0.84509804 0 0.285714286 0.545454545 7 4 0 7 X:19136533-19136579 7 6 3455 FBgn0261461 2047.33 61.32666667 94.48 0.002930646 0.097836721 0.063505504 -4 3 -0.5 0.2 dme-miR-2535b-3p 7mer-m1 CGTGAGT X 1915556 1915562 + X_1915556_1915562_+ 0.765585309 0.760290728 0.762938018 0.003743848 Rbcn-3B FBtr0070316|FBtr0344155 1915333|1915333 1916174|1916825 X + 1915525 1915572 5'utr Rbcn-3B FlyBase G58117.1 GAAAATAAAAGTGCGGTAATGTATGGCGTTTCGTGAGTAGTTAAGGTA 10 1915547 0.939869701 6 9 73 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 X:1915525-1915572 7 Rbcn-3B FBtr0344155|FBtr0070316 1915333|1915333 1916825|1916174 CGTGAGT 7mer-m1 dme-miR-2535b-3p X + 1915535 1915572 5'utr Rbcn-3B FlyBase G43968.1 GTGCGGTAATGTATGGCGTTTCGTGAGTAGTTAAGGTA 5 1915546 0.763833871 4 4 39 1 1 0.1 0.6 0.8 5 0 0 10 X:1915535-1915572 7 6 3456 FBgn0023510 935.05 16.80666667 25.86333333 0.006416769 0.35700119 0.231988658 9 10 9.5 0.2 dme-miR-970-3p 6mer3-8 TCTTAT X 1915784 1915789 + X_1915784_1915789_+ 0.977793762 0.899492822 0.938643292 0.055367168 Rbcn-3B FBtr0070316|FBtr0344155 1915333|1915333 1916174|1916825 X + 1915740 1915901 5'utr Rbcn-3B FlyBase G58118.1 CGTATCTGTATGTATTTTAATGTATTACACGATTTTAATATGTCTCTTATTCGCCCCTCTGCGTTCTTTTTAATTTTTAGTGCCTAACTTTTACCCATACTCTTAGAACACGTATTTCTGTTTCTGTTTCTGTTTCTGTTTGTCGTTAATTTCCAATGCGGA 25 1915797 0.990431798 14 25 258 1 1.531478917 0.117647059 0.28 0.470588235 25 0 0 34 X:1915740-1915901 6 Rbcn-3B FBtr0344155|FBtr0070316 1915333|1915333 1916825|1916174 TCTTAT 6mer3-8 dme-miR-970-3p X + 1915786 1915809 5'utr Rbcn-3B FlyBase G43969.1 TTATTCGCCCCTCTGCGTTCTTTT 6 1915806 0.640503434 3 6 51 1 1.041392685 0 0.666666667 0.818181818 6 0 0 11 X:1915786-1915809 3 6 3457 FBgn0023510 935.05 16.80666667 25.86333333 0.006416769 0.35700119 0.231988658 -13 -22 -17.5 0.2 dme-miR-1008-3p 6mer3-8 AGCTGT X 1916032 1916037 + X_1916032_1916037_+ 0.988362819 0.754684542 0.871523681 0.165235511 Rbcn-3B FBtr0070316|FBtr0344155 1915333|1915333 1916174|1916825 X + 1915965 1916080 5'utr Rbcn-3B FlyBase G58119.1 AAGCAAACACAACTACACGAGAAAAGCAAAGGAAATGAAAAACGAAAAAAAAAAACAAAGAATGAAAAGCTGTTATTATTATTACTCAACTATTATTATTACTATTGTATGCTACT 24 1916040 0.989185921 9 20 167 0.833333333 1.096910013 0 0.208333333 0.366666667 24 4 1 25 X:1915965-1916080 6 Rbcn-3B FBtr0344155|FBtr0070316 1915333|1915333 1916825|1916174 AGCTGT 6mer3-8 dme-miR-1008-3p X + 1916013 1916089 5'utr Rbcn-3B FlyBase G43970.1 AAAAAAACAAAGAATGAAAAGCTGTTATTATTATTACTCAACTATTATTATTACTATTGTATGCTACTATTATTATT 11 1916040 0.995025947 6 8 108 0.571428571 0.903089987 0.071428571 0.181818182 0.357142857 11 6 0 8 X:1916013-1916089 6 12 3458 FBgn0023510 935.05 16.80666667 25.86333333 0.012833538 0.71400238 0.463977317 -8 -8 -8 0.2 dme-miR-252-5p 6mer3-8 GTACTT X 19176929 19176934 - X_19176929_19176934_- 0.991571867 0.993086538 0.992329203 0.001070984 CG7556 FBtr0343313 19176107 19177281 X - 19176910 19176968 3'utr CG7556 FlyBase G68880.1 TGTCAGGGATAAAGCCATCGATGATAGATACGGTGTACTTCCAGGTTAGTAACTAATAA 6 19176932 0.985865214 4 6 44 1 0.77815125 0.333333333 0 0 6 0 0 6 X:19176910-19176968 6 CG7556 FBtr0343313 19176107 19177281 GTACTT 6mer3-8 dme-miR-252-5p X - 19176920 19176959 3'utr CG7556 FlyBase G51808.1 TAAAGCCATCGATGATAGATACGGTGTACTTCCAGGTTAG 7 19176938 0.789307022 3 5 42 0.8 0.602059991 0.4 0.285714286 0.5 7 1 1 8 X:19176920-19176959 6 5 3459 FBgn0030990 550.2733333 27.66666667 42.21666667 0.009086393 0.180722892 0.118436636 -2 4 1 0.2 dme-miR-14-3p 6mer3-8 AAGACT X 19177182 19177187 - X_19177182_19177187_- 0.980229975 0.916868352 0.948549163 0.044803417 CG7556 FBtr0074697|FBtr0343313 19176995|19176107 19177281|19177281 X - 19176997 19177204 3'utr CG7556 FlyBase G68881.1 TTTTATACTTTGCATTAAAGACTCTCTGGCATAGCATTTTGGACCTTGCCAATCCTAATCCGCGGCCCGATCCTCTGCCCCTTCCCTGACCTTCTGTTTCCATCACCGTGTGTAGCGCTTATCTTATGTTTTGTACATAATTCTATATTGTAAACATCTAAATGTCGATTAATTCCTTTGCTAAGTAAACGAAATGTAAGAGGAAGTG 139 19177179 0.922892446 35 131 949 0.937888199 2.178976947 0.167701863 0.143884892 0.260869565 139 10 0 151 X:19176997-19177204 6 CG7556 FBtr0074697|FBtr0343313 19176995|19176107 19177281|19177281 AAGACT 6mer3-8 dme-miR-14-3p X - 19177112 19177200 3'utr CG7556 FlyBase G51809.2 ATACTTTGCATTAAAGACTCTCTGGCATAGCATTTTGGACCTTGCCAATCCTAATCCGCGGCCCGATCCTCTGCCCCTTCCCTGACCTT 66 19177179 0.789691898 15 56 404 0.842105263 1.124938737 0.115789474 0.333333333 0.536842105 66 10 5 80 X:19177112-19177200 6 64.5 3460 FBgn0030990 550.2733333 27.66666667 42.21666667 0.117214475 2.331325301 1.52783261 -8 -8 -8 0.2 dme-miR-995-5p 6mer3-8 AATTCG X 19181511 19181516 + X_19181511_19181516_+ 0.714684124 0.7724171 0.743550612 0.040823396 CG7453 FBtr0074666 19181192 19182024 X + 19181221 19181685 3'utr CG7453 FlyBase G62831.1 AAGGGCGGCCACTTCACCGGGTGCTCCAACGCCTCCTCCGGCGCACTCGGATGATTATTAGTTGTTTAAGTTATACACGACTGGACGTGCTTGCATTCAATGCAAGATCGCCGGATCGAAAGCAGAGTGAGAGTAGCGGAGAGCAGAGGAGGCGGTGGGAAAACGAAACGAAACTATGATATTGCTCAGTCAATTAGAGGAGGAGGAGAAAGGGATTCGCTTTGCAGCGTGGCTAGGATACCCTTCCGAGCGGCCAAATTGAATTTAAAGCCAACTGATTTTCAACACTAAATTCGAGTGGACTCTTAAGTTTAAGCATTTGGATTATTGTCAAGCATTTGTTAGCAATCAAAAATTGATACCGGCACTTATATGTACCCTATATATACATATATCTACTTAGGCTGCTGCTGTACATCGAAGGCTGCGGACTCTCAACCATCAACCATCAACATCAACATCAGC 372 19181519 0.977527574 68 357 2353 0.963218391 2.622214023 0.222988506 0.14516129 0.268965517 372 16 0 419 X:19181221-19181685 6 CG7453 FBtr0074666 19181192 19182024 AATTCG 6mer3-8 dme-miR-995-5p X + 19181225 19181670 3'utr CG7453 FlyBase G47396.1 GCGGCCACTTCACCGGGTGCTCCAACGCCTCCTCCGGCGCACTCGGATGATTATTAGTTGTTTAAGTTATACACGACTGGACGTGCTTGCATTCAATGCAAGATCGCCGGATCGAAAGCAGAGTGAGAGTAGCGGAGAGCAGAGGAGGCGGTGGGAAAACGAAACGAAACTATGATATTGCTCAGTCAATTAGAGGAGGAGGAGAAAGGGATTCGCTTTGCAGCGTGGCTAGGATACCCTTCCGAGCGGCCAAATTGAATTTAAAGCCAACTGATTTTCAACACTAAATTCGAGTGGACTCTTAAGTTTAAGCATTTGGATTATTGTCAAGCATTTGTTAGCAATCAAAAATTGATACCGGCACTTATATGTACCCTATATATACATATATCTACTTAGGCTGCTGCTGTACATCGAAGGCTGCGGACTCTCAACCATCAACCATC 247 19181519 0.978740321 64 228 1549 0.930294906 2.06320822 0.222520107 0.380566802 0.589812332 247 24 2 347 X:19181225-19181670 6 67.5 3461 FBgn0030991 1383.076667 90.74333333 138.8333333 0.048804236 0.743856298 0.486194478 -8 -8 -8 0.2 dme-miR-277-3p 7mer-A1 GCATTTA X 19181804 19181810 + X_19181804_19181810_+ 0.818663897 0.759392512 0.789028205 0.041911209 CG7453 FBtr0074666 19181192 19182024 X + 19181706 19181846 3'utr CG7453 FlyBase G62832.1 GCATCCACAATCTAGCCGTAATGTGCCTTACGAACCAGCTCTATATACACCTTTACACATGATATTCTCCATCGCCGGGTCTTCGAGGTGATTTCTTCGCATTTACTTTACGCAACCAAGCAGCAGCACTCACTCAAAAAA 87 19181798 0.878989673 20 72 593 0.831858407 1.672097858 0.17699115 0.218390805 0.398230088 87 18 1 94 X:19181706-19181846 7 CG7453 FBtr0074666 19181192 19182024 GCATTTA 7mer-A1 dme-miR-277-3p X + 19181714 19181814 3'utr CG7453 FlyBase G47397.1 AATCTAGCCGTAATGTGCCTTACGAACCAGCTCTATATACACCTTTACACATGATATTCTCCATCGCCGGGTCTTCGAGGTGATTTCTTCGCATTTACTTT 26 19181798 0.948156797 13 25 194 0.975 1.290034611 0.225 0.384615385 0.6 26 0 1 39 X:19181714-19181814 7 6 3462 FBgn0030991 1383.076667 90.74333333 138.8333333 0.004338154 0.06612056 0.043217287 6 6 6 0.2 dme-miR-1006-3p 6mer2-7 GAATTT X 19195673 19195678 + X_19195673_19195678_+ 0.999989624 0.999727691 0.999858657 0.000185191 CG14194 FBtr0074671|FBtr0336701 19195450|19195450 19196037|19196037 X + 19195652 19195723 3'utr CG14194 FlyBase G62849.1 CGTAGCTTTTAGACTTGTACTGAATTTTAATTGTAAGACAAACGCTAACACCGCCCACGAACCATGTCCAAC 30 19195668 0.99173232 11 25 263 0.828571429 0.985276743 0.085714286 0.1 0.228571429 30 4 2 29 X:19195652-19195723 6 CG14194 FBtr0336701|FBtr0074671 19195450|19195450 19196037|19196037 GAATTT 6mer2-7 dme-miR-1006-3p X + 19195649 19195693 3'utr CG14194 FlyBase G47405.1 CGTCGTAGCTTTTAGACTTGTACTGAATTTTAATTGTAAGACAAA 11 19195668 0.740565461 8 9 95 0.785714286 1.041392685 0.071428571 0.272727273 0.428571429 11 3 0 11 X:19195649-19195693 6 17 3463 FBgn0030996 477.9966667 30.26333333 46.23333333 0.035565102 0.561735874 0.367700072 5 5 5 0.2 dme-miR-190-5p 7mer-m1 CATATCT X 19202690 19202696 - X_19202690_19202696_- 0.697566184 0.710758924 0.704162554 0.009328648 Ulp1 FBtr0074693 19202101 19202871 X - 19202584 19202731 3'utr Ulp1 FlyBase G68895.2 TGGCTGAGACCCCTGCTGGTGCATTAACTTGTTCTCATATCTGATTGTAAAAGAGAATCTATTTCTTCAATAAAATGTCACCAAGTAAAAGCGATGCGAATAAGGATGTATTAATCGCCGAATATCTTCAAGTTTATAATTAATATTT 53 19202703 0.931505506 17 49 429 0.935483871 1.763427994 0.338709677 0.169811321 0.290322581 53 4 0 58 X:19202584-19202731 7 Ulp1 FBtr0074693 19202101 19202871 CATATCT 7mer-m1 dme-miR-190-5p X - 19202684 19202734 3'utr Ulp1 FlyBase G51821.1 AGATGGCTGAGACCCCTGCTGGTGCATTAACTTGTTCTCATATCTGATTGT 19 19202703 0.989708999 7 19 181 1 1.431363764 0.222222222 0.368421053 0.555555556 19 0 0 27 X:19202684-19202734 7 16.5 3464 FBgn0027603 2154.723333 47.38666667 72.81666667 0.007657596 0.348199212 0.226596475 7 7 7 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 19245030 19245036 + X_19245030_19245036_+ 0.82251869 0.823091312 0.822805001 0.000404889 CG7889 FBtr0074675 19244824 19245224 X + 19245016 19245051 3'utr CG7889 FlyBase G62859.1 TTTGTATCTAATTTCCAAAGAATTTGACTTAAGCAG 16 19245028 0.782570765 3 16 133 1 1.230448921 0.235294118 0.0625 0.117647059 16 0 0 17 X:19245016-19245051 7 CG7889 FBtr0074675 19244824 19245224 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X + 19245015 19245052 3'utr CG7889 FlyBase G47411.1 TTTTGTATCTAATTTCCAAAGAATTTGACTTAAGCAGT 11 19245028 0.781801197 3 11 116 1 1.146128036 0.428571429 0.181818182 0.357142857 11 0 0 14 X:19245015-19245052 7 13.5 3465 FBgn0031003 189 15.83 24.33666667 0.071428571 0.852811118 0.554718532 2 2 2 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA X 19252280 19252287 - X_19252280_19252287_- 0.483504743 0.493488027 0.488496385 0.007059259 rictor FBtr0074689|FBtr0343634|FBtr0343635 19252109|19252109|19252109 19252721|19252721|19252721 X - 19252263 19252312 3'utr rictor FlyBase G68918.1 AACCACCGCAATTTATTTAATTAATGTACTTAAAACTAAAAGAGACCCAG 42 19252288 0.978746993 2 41 298 0.980392157 1.397940009 0 0.19047619 0.333333333 42 0 1 50 X:19252263-19252312 8 rictor FBtr0343634|FBtr0343635|FBtr0074689 19252109|19252109|19252109 19252721|19252721|19252721 GTACTTAA 8mer-A1 dme-miR-252-5p X - 19252273 19252300 3'utr rictor FlyBase G51841.1 TTATTTAATTAATGTACTTAAAACTAAA 22 19252288 0.731338914 2 22 170 1 1.51851394 0 0.409090909 0.606060606 22 0 0 33 X:19252273-19252300 8 32 3466 FBgn0031006 604.1266667 11.03 16.89666667 0.052969024 2.901178604 1.893864668 1 1 1 0.2 dme-miR-34-5p 7mer-m8 CACTGCC X 19252673 19252679 - X_19252673_19252679_- 0.708138057 0.708790973 0.708464515 0.00046167 rictor FBtr0074689|FBtr0343634|FBtr0343635 19252109|19252109|19252109 19252721|19252721|19252721 X - 19252639 19252730 stop_codon rictor FlyBase G68921.1 AACTCCTAGACGCACTGGCGGAAGATCAATTGAAGTAGCCCAATGGGGACGCACTGCCTACTCTTACATCTCGTTTACTGGCCGCCCGCCTT 16 19252672 0.95481563 8 15 76 0.947368421 1.255272505 0.105263158 0.1875 0.315789474 16 1 0 18 X:19252639-19252730 7 rictor FBtr0343634|FBtr0343635|FBtr0074689 19252109|19252109|19252109 19252721|19252721|19252721 CACTGCC 7mer-m8 dme-miR-34-5p X - 19252636 19252688 3'utr rictor FlyBase G51844.1 ATGGGGACGCACTGCCTACTCTTACATCTCGTTTACTGGCCGCCCGCCTTCCT 7 19252670 0.966802684 7 7 36 1 0.84509804 0 0 0 7 0 0 7 X:19252636-19252688 7 6 3467 FBgn0031006 604.1266667 11.03 16.89666667 0.009931692 0.543970988 0.355099625 -7 -9 -8 0.2 dme-miR-980-3p 7mer-A1 GCAGCTA X 19271799 19271805 + X_19271799_19271805_+ 0.742501249 0.75077354 0.746637395 0.005849399 Vav FBtr0074678|FBtr0333759|FBtr0113316|FBtr0074677 19271577|19271577|19271577|19271577 19273280|19272089|19272089|19272089 X + 19271770 19271830 3'utr Vav FlyBase G62875.1 CGATGTCGCCAGTCACAGCAACAACAATTGCAGCTAGATCGTAGCCTAGTTAAATGTATAC 213 19271797 0.827167595 5 209 843 0.98015873 2.392696953 0.130952381 0.145539906 0.277777778 213 5 0 247 X:19271770-19271830 7 Vav FBtr0113316|FBtr0074677|FBtr0074678|FBtr0333759 19271577|19271577|19271577|19271577 19272089|19272089|19273280|19272089 GCAGCTA 7mer-A1 dme-miR-980-3p X + 19271759 19271825 3'utr Vav FlyBase G47422.1 GAGGCCGTGGCCGATGTCGCCAGTCACAGCAACAACAATTGCAGCTAGATCGTAGCCTAGTTAAATG 138 19271797 0.932630892 3 135 504 0.982758621 2.357934847 0.163793103 0.463768116 0.681034483 138 4 0 228 X:19271759-19271825 7 174.5 3468 FBgn0040068 329.8133333 9.073333333 13.89 0.52908716 19.23218222 12.56299496 2 2 2 0.2 dme-miR-263a-5p 6mer3-8 GTGCCA X 19271941 19271946 + X_19271941_19271946_+ 0.965079259 0.965586342 0.965332801 0.000358503 Vav FBtr0074678|FBtr0333759|FBtr0113316|FBtr0074677 19271577|19271577|19271577|19271577 19273280|19272089|19272089|19272089 X + 19271916 19271963 3'utr Vav FlyBase G62876.1 TTTGCGTCGTCTGCTCGAAACATTTGTGCCAATCACCGGAAAATTACA 6 19271939 0.957373768 5 6 33 1 0.954242509 0 0.5 0.666666667 6 0 0 9 X:19271916-19271963 6 Vav FBtr0113316|FBtr0074677|FBtr0074678|FBtr0333759 19271577|19271577|19271577|19271577 19272089|19272089|19273280|19272089 GTGCCA 6mer3-8 dme-miR-263a-5p X + 19271918 19271960 3'utr Vav FlyBase G47423.1 TGCGTCGTCTGCTCGAAACATTTGTGCCAATCACCGGAAAATT 5 19271948 0.956761419 3 5 30 1 0.84509804 0 0.2 0.428571429 5 0 0 7 X:19271918-19271960 6 5.5 3469 FBgn0040068 329.8133333 9.073333333 13.89 0.0166761 0.606171932 0.395968323 2 -7 -2.5 0.2 dme-miR-252-5p 6mer3-8 GTACTT X 19272255 19272260 + X_19272255_19272260_+ 0.999157385 0.952910529 0.976033957 0.032701497 Vav FBtr0074678 19271577 19273280 X + 19272250 19272310 3'utr Vav FlyBase G62877.1 TTATTGTACTTGTACTGGTAGATATTTAACCCTAGTTGAAACGCAAATGTTAACATAACGA 10 19272259 0.995386593 6 7 95 0.538461538 0.84509804 0.076923077 0.1 0.307692308 10 6 0 7 X:19272250-19272310 6 Vav FBtr0074678 19271577 19273280 GTACTT 6mer3-8 dme-miR-252-5p X + 19272252 19272287 3'utr Vav FlyBase G47424.1 ATTGTACTTGTACTGGTAGATATTTAACCCTAGTTG 5 19272261 0.958274403 4 5 52 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 X:19272252-19272287 6 5.5 3470 FBgn0040068 329.8133333 9.073333333 13.89 0.0166761 0.606171932 0.395968323 -4 -6 -5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 19272508 19272513 + X_19272508_19272513_+ 0.999983362 0.894719986 0.947351674 0.074432464 Vav FBtr0074678 19271577 19273280 X + 19272451 19272563 3'utr Vav FlyBase G62879.1 TATAGATATCTATACCTATAACTATAACTATACCTAATAACTATAACTAACTATAATGTACCTATTTATATAGCCAACGAATCACCTTGCGAACTTGATGGATGATGAGTCGA 14 19272507 0.982620591 8 14 105 1 1.204119983 0.125 0.142857143 0.25 14 0 0 16 X:19272451-19272563 6 Vav FBtr0074678 19271577 19273280 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X + 19272482 19272524 3'utr Vav FlyBase G47425.1 ACCTAATAACTATAACTAACTATAATGTACCTATTTATATAGC 5 19272507 0.984288311 2 5 51 1 0.698970004 0 0 0 5 0 0 5 X:19272482-19272524 6 6 3471 FBgn0040068 329.8133333 9.073333333 13.89 0.018192109 0.661278472 0.431965443 1 1 1 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT X 19273140 19273146 + X_19273140_19273146_+ 0.658892173 0.658999526 0.658945849 7.59E-05 Vav FBtr0074678 19271577 19273280 X + 19273108 19273165 3'utr Vav FlyBase G62880.1 CGCTCGCCTGCTGTCCCTTTCCCTTTCGCATCGGCAGCTCCAAAATTATTGTTAAGTA 15 19273138 0.892096526 5 14 132 0.933333333 1.146128036 0 0 0 15 1 0 14 X:19273108-19273165 7 Vav FBtr0074678 19271577 19273280 GGCAGCT 7mer-m8 dme-miR-980-3p X + 19273117 19273164 3'utr Vav FlyBase G47426.1 GCTGTCCCTTTCCCTTTCGCATCGGCAGCTCCAAAATTATTGTTAAGT 13 19273137 0.795250234 8 12 102 0.952380952 1.301029996 0 0.307692308 0.571428571 13 1 0 20 X:19273117-19273164 7 12.5 3472 FBgn0040068 329.8133333 9.073333333 13.89 0.037900226 1.377663483 0.899928006 2 3 2.5 0.2 dme-miR-14-3p 7mer-A1 AGACTGA X 19485920 19485926 - X_19485920_19485926_- 0.77508316 0.782699302 0.778891231 0.005385396 pcm FBtr0302082|FBtr0074784 19485757|19485878 19486102|19486102 X - 19485901 19485952 3'utr pcm FlyBase G69024.1 TTGCGGATTATGTGAATACTAAAATGAGACTGACTCGTCTTTATATTTTTTC 220 19485928 0.932390553 8 214 1370 0.98467433 2.409933123 0.340996169 0.154545455 0.287356322 220 4 0 257 X:19485901-19485952 7 pcm FBtr0302082|FBtr0074784 19485757|19485878 19486102|19486102 AGACTGA 7mer-A1 dme-miR-14-3p X - 19485880 19485960 3'utr pcm FlyBase G51910.1 TTTTAGAGTTGCGGATTATGTGAATACTAAAATGAGACTGACTCGTCTTTATATTTTTTCAATAAACTGGACTTTACCCAT 122 19485928 0.922353502 11 118 715 0.963190184 2.195899652 0.306748466 0.303278689 0.478527607 122 6 0 157 X:19485880-19485960 7 154.5 3473 FBgn0020261 395.3566667 9.006666667 13.76666667 0.390786379 17.15396003 11.22276029 2 2 2 0.2 dme-miR-980-3p 6mer3-8 GGCAGC X 19493374 19493379 - X_19493374_19493379_- 0.994767417 0.992444559 0.993605988 0.001642468 CG12204 FBtr0074783 19493290 19493407 X - 19493341 19493393 3'utr CG12204 FlyBase G69031.1 GTGCCGCTTCCATTGGCAGCGAAACTGGTGGCCATTACATGGTGCTGTGGTCA 7 19493380 0.967141724 4 7 42 1 0.954242509 0.666666667 0.285714286 0.444444444 7 0 0 9 X:19493341-19493393 6 CG12204 FBtr0074783 19493290 19493407 GGCAGC 6mer3-8 dme-miR-980-3p X - 19493357 19493401 3'utr CG12204 FlyBase G51915.2 ATGTGATGGTGCCGCTTCCATTGGCAGCGAAACTGGTGGCCATTA 8 19493381 0.810611491 2 7 39 0.9375 0.875061263 0.5625 0.375 0.6875 8 0 1 15 X:19493357-19493401 6 6 3474 FBgn0031022 64 7.23 11.12666667 0.09375 0.829875519 0.539245057 1 2 1.5 0.2 dme-miR-308-3p 7mer-m1 TGTGATT X 19508833 19508839 + X_19508833_19508839_+ 0.521069723 0.520180282 0.520625002 0.000628901 Pfrx FBtr0074713|FBtr0074717|FBtr0074715|FBtr0307193|FBtr0074716|FBtr0074714|FBtr0074720|FBtr0307194|FBtr0339439|FBtr0339440|FBtr0074718|FBtr0307192|FBtr0074719 19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526 19509350|19509350|19509350|19509350|19508902|19509350|19509350|19509350|19509350|19509350|19509350|19509350|19509350 X + 19508723 19508869 3'utr Pfrx FlyBase G62900.1 AGACACGGACGTGGTCATGCGAGGGCAACACTGACAACTGCTCCTGCACCTGCTCCAAGGATGTGGTGGCATCTCTACTTAACGTGGCGTCGAAGGACTGCGTATGAAATTGTGATTGATCCATTGTGCTGTTTTATTATGTACTTT 182 19508832 0.988207279 16 177 1612 0.964912281 1.643452676 0.057017544 0.203296703 0.364035088 182 4 4 220 X:19508723-19508869 7 Pfrx FBtr0074714|FBtr0074716|FBtr0074719|FBtr0339440|FBtr0307194|FBtr0074718|FBtr0339439|FBtr0307192|FBtr0074720|FBtr0074713|FBtr0074717|FBtr0074715|FBtr0307193 19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526 19509350|19508902|19509350|19509350|19509350|19509350|19509350|19509350|19509350|19509350|19509350|19509350|19509350 TGTGATT 7mer-m1 dme-miR-308-3p X + 19508773 19508873 3'utr Pfrx FlyBase G47437.1 TGCTCCAAGGATGTGGTGGCATCTCTACTTAACGTGGCGTCGAAGGACTGCGTATGAAATTGTGATTGATCCATTGTGCTGTTTTATTATGTACTTTAATG 122 19508832 0.965571548 18 117 1095 0.957894737 1.561101384 0.068421053 0.409836066 0.621052632 122 4 4 182 X:19508773-19508873 7 125.5 3475 FBgn0027621 67 2.486666667 3.756666667 1.873134328 50.4691689 33.40727595 1 1 1 0.2 dme-miR-33-5p 7mer-A1 AATGCAA X 19518469 19518475 - X_19518469_19518475_- 0.766266591 0.743688088 0.754977339 0.01596541 l(1)G0156 FBtr0307904 19518426 19519286 X - 19518436 19518516 3'utr l(1)G0156 FlyBase G69036.1 ATGAAATGAAGGCAATTGTTATTAATAGTTAAGCGAATTGTAATGCAAAGTCATCATGCAATTGTTAAAACTCAATAAAGG 30 19518478 0.98233379 8 29 221 0.914285714 1.505149978 0.057142857 0.133333333 0.257142857 30 3 0 32 X:19518436-19518516 7 l(1)G0156 FBtr0307904 19518426 19519286 AATGCAA 7mer-A1 dme-miR-33-5p X - 19518453 19518527 3'utr l(1)G0156 FlyBase G51919.1 ATACAAATGCTATGAAATGAAGGCAATTGTTATTAATAGTTAAGCGAATTGTAATGCAAAGTCATCATGCAATTG 17 19518478 0.986283148 6 15 130 0.956521739 1.342422681 0.173913043 0.294117647 0.47826087 17 1 0 22 X:19518453-19518527 7 19.5 3476 FBgn0027291 1766.01 106.06 162.5666667 0.01104184 0.183858193 0.119950789 3 3 3 0.2 dme-miR-304-5p 7mer-A1 GAGATTA X 19529975 19529981 + X_19529975_19529981_+ 0.822044136 0.818851344 0.82044774 0.002257651 CoRest FBtr0302864|FBtr0307903|FBtr0302862|FBtr0302863 19529756|19529756|19529756|19529756 19530896|19530896|19530896|19530896 X + 19529941 19530015 3'utr CoRest FlyBase G62931.1 AAAAGAAAGCATCACGGCTTTATCTAGGCTTGTAGAGATTAGTTCGTTTGTATTTGAGGTAACCTTGAGACAGTT 14 19529971 0.987418659 7 14 123 1 1.204119983 0.1875 0.142857143 0.25 14 0 0 16 X:19529941-19530015 7 CoRest FBtr0302862|FBtr0302863|FBtr0302864|FBtr0307903 19529756|19529756|19529756|19529756 19530896|19530896|19530896|19530896 GAGATTA 7mer-A1 dme-miR-304-5p X + 19529900 19530016 3'utr CoRest FlyBase G47462.1 TTCTCTTAATTGTCTTTAAACTTGGGACGCATTTATCGTAAAAAAGAAAGCATCACGGCTTTATCTAGGCTTGTAGAGATTAGTTCGTTTGTATTTGAGGTAACCTTGAGACAGTTC 21 19529971 0.986639322 12 20 173 0.941176471 1.505149978 0.117647059 0.428571429 0.647058824 21 2 0 32 X:19529900-19530016 7 10 3477 FBgn0261573 1764.736667 66.82333333 102.5833333 0.005666568 0.149648326 0.097481722 4 4 4 0.2 dme-miR-283-5p 8mer-A1 TGATATTA X 19570999 19571006 - X_19570999_19571006_- 0.591225321 0.592146167 0.591685744 0.000651175 Tao FBtr0304000|FBtr0303999 19570645|19569719 19571580|19571580 X - 19570967 19571018 5'utr Tao FlyBase G69059.1 TAAAGTCTAATTTGATATTATTACCGGATAACTGAATCAATCACACAATTTT 8 19571007 0.995075438 3 6 73 0.8 0.903089987 0.4 0.25 0.4 8 2 0 8 X:19570967-19571018 8 Tao FBtr0304000|FBtr0303999 19570645|19569719 19571580|19571580 TGATATTA 8mer-A1 dme-miR-283-5p X - 19570974 19571030 5'utr Tao FlyBase G51935.1 AAGTGTTTAAATTAAAGTCTAATTTGATATTATTACCGGATAACTGAATCAATCACA 8 19571007 0.983233516 4 7 72 1 1.146128036 0.142857143 0.625 0.785714286 8 0 0 14 X:19570974-19571030 8 6.5 3478 FBgn0031030 4262.23 160.5366667 246.0233333 0.001525023 0.040489193 0.026420258 1 1 1 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG X 19615481 19615486 + X_19615481_19615486_+ 0.999994835 0.999985724 0.999990279 6.43E-06 Shawn FBtr0074739|FBtr0344069|FBtr0074738|FBtr0074737 19615415|19615415|19615415|19615415 19615617|19615617|19615596|19615617 X + 19615419 19615512 3'utr Shawn FlyBase G62963.1 GCGCTCCCAATGCGGTGACCACAGCATGTCGACGTGAATCTTTGTACATATGTAGATTAATGCCAAAGTTGCCAGGAAATCGGTGGGCAGGTGG 18 19615479 0.969877113 6 16 96 0.947368421 1.255272505 0.473684211 0.055555556 0.105263158 18 1 0 18 X:19615419-19615512 6 Shawn FBtr0074737|FBtr0074738|FBtr0344069|FBtr0074739 19615415|19615415|19615415|19615415 19615617|19615596|19615617|19615617 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" X + 19615462 19615501 3'utr Shawn FlyBase G47491.1 GTACATATGTAGATTAATGCCAAAGTTGCCAGGAAATCGG 11 19615479 0.721593854 5 9 59 0.866666667 1.113943352 0.466666667 0.363636364 0.533333333 11 2 0 13 X:19615462-19615501 6 12.5 3479 FBgn0031039 175.68 13.25333333 20.26333333 0.071152095 0.943158954 0.616877776 2 2 2 0.2 dme-miR-2535b-3p 6mer3-8 CCGTGA X 19622029 19622034 - X_19622029_19622034_- 0.931011629 0.968721991 0.94986681 0.02666528 NAA20 FBtr0332483|FBtr0332484|FBtr0074763 19621449|19621449|19621449 19622172|19622172|19622172 X - 19622011 19622047 5'utr NAA20 FlyBase G69082.1 ATAACCCATAATCCCGTGATCTGCCCGGTGATAACAT 32 19622027 0.718237669 4 32 165 1 1.579783597 0 0.125 0.263157895 32 0 0 38 X:19622011-19622047 6 NAA20 FBtr0074763|FBtr0332484|FBtr0332483 19621449|19621449|19621449 19622172|19622172|19622172 CCGTGA 6mer3-8 dme-miR-2535b-3p X - 19622012 19622047 5'utr NAA20 FlyBase G51951.1 ATAACCCATAATCCCGTGATCTGCCCGGTGATAACA 21 19622026 0.765807665 4 20 93 1 1.556302501 0 0.523809524 0.722222222 21 0 0 36 X:19622012-19622047 6 25.5 3480 FBgn0031043 449.0266667 46.18333333 70.71 0.0567895 0.552147239 0.360627917 -7 -8 -7.5 0.2 dme-miR-283-5p 7mer-m1 GATATTT X 19625414 19625420 + X_19625414_19625420_+ 0.764414508 0.753502381 0.758958445 0.00771602 MKP-4 FBtr0074741 19624630 19625729 X + 19625390 19625428 3'utr MKP-4 FlyBase G62973.1 CACACAAACTATGAATGTATTTTAGATATTTAAACCTTT 9 19625411 0.83348416 5 8 89 1 1 0 0.111111111 0.2 9 0 0 10 X:19625390-19625428 7 MKP-4 FBtr0074741 19624630 19625729 GATATTT 7mer-m1 dme-miR-283-5p X + 19625389 19625418 3'utr MKP-4 FlyBase G47503.1 ACACACAAACTATGAATGTATTTTAGATAT 5 19625411 0.893212536 2 5 41 1 1 0.1 0.8 0.9 5 0 0 10 X:19625389-19625418 5 6.5 3481 FBgn0031044 267.6933333 13.86333333 21.32666667 0.024281516 0.468862707 0.304782745 3 3 3 0.2 dme-miR-970-3p 7mer-m8 TCTTATG X 19626599 19626605 - X_19626599_19626605_- 0.65404094 0.578875368 0.616458154 0.053150035 e(y)3 FBtr0334278 19626546 19628098 X - 19626560 19626617 3'utr e(y)3 FlyBase G69087.1 AAGTGGAATTATTCTTATGTATACATACTGAAAGATTTATTTTTAAGTCGAATAAAAC 20 19626606 0.849427319 6 19 185 1 1.477121255 0.033333333 0.25 0.5 20 0 0 30 X:19626560-19626617 7 e(y)3 FBtr0334278 19626546 19628098 TCTTATG 7mer-m8 dme-miR-970-3p X - 19626566 19626653 3'utr e(y)3 FlyBase G51954.1 CTTTATGCGAAAAGTAAATCTTAAGTCCTTCATATTAAGTGGAATTATTCTTATGTATACATACTGAAAGATTTATTTTTAAGTCGAA 12 19626581 0.98775482 9 11 99 0.947368421 1.255272505 0.105263158 0.416666667 0.631578947 12 1 0 18 X:19626566-19626653 7 11.5 3482 FBgn0087008 1841.593333 29.13666667 44.69333333 0.006244593 0.394691683 0.257309069 1 -24 -11.5 0.2 dme-miR-305-3p 6mer3-8 ATGTGC X 19627148 19627153 - X_19627148_19627153_- 0.999865252 0.999993212 0.999929232 9.04E-05 e(y)3 FBtr0334278 19626546 19628098 X - 19627067 19627172 3'utr e(y)3 FlyBase G69091.1 CAGCCTAAGTAGTGTCTTCATGTGCGGTAGCTGCTTGTCCTTTTTTTTTTCGATTCGTTTAGTTTAGATTCGGTAGATTCGTAAGCGGGGTAGGGACTTGGCTCGG 34 19627151 0.98567455 12 30 290 0.897435897 1.544068044 0.179487179 0.088235294 0.205128205 34 4 0 35 X:19627067-19627172 6 e(y)3 FBtr0334278 19626546 19628098 ATGTGC 6mer3-8 dme-miR-305-3p X - 19627126 19627216 3'utr e(y)3 FlyBase G51957.1 ATTTATAAGAACCACGCCCTCTAGCCCATGTAAGTAGTTAAGCACAGCCTAAGTAGTGTCTTCATGTGCGGTAGCTGCTTGTCCTTTTTTT 19 19627141 0.980642167 7 19 140 1 1.491361694 0.451612903 0.368421053 0.612903226 19 0 0 31 X:19627126-19627216 6 18 3483 FBgn0087008 1841.593333 29.13666667 44.69333333 0.009774145 0.617778286 0.40274463 -2 -12 -7 0.2 dme-miR-1006-3p 7mer-m8 CGAATTT X 19627241 19627247 - X_19627241_19627247_- 0.481941852 0.477928959 0.479935405 0.002837549 e(y)3 FBtr0334278 19626546 19628098 X - 19627238 19627306 3'utr e(y)3 FlyBase G69092.1 CGCACTGTGCATCTGTATTTTCTATAGACATTATATTTGATTTTAAACGTCTTATGCGCCGAATTTTTG 19 19627252 0.827323731 11 18 160 0.956521739 1.342422681 0.043478261 0.157894737 0.304347826 19 1 0 22 X:19627238-19627306 7 e(y)3 FBtr0334278 19626546 19628098 CGAATTT 7mer-m8 dme-miR-1006-3p X - 19627232 19627262 3'utr e(y)3 FlyBase G51958.1 AAACGTCTTATGCGCCGAATTTTTGAACATG 5 19627253 0.735662856 3 5 28 1 0.698970004 0 0 0 5 0 0 5 X:19627232-19627262 7 7 3484 FBgn0087008 1841.593333 29.13666667 44.69333333 0.003801056 0.240247111 0.156622912 5 6 5.5 0.2 dme-miR-14-3p 6mer3-8 AAGACT X 19627662 19627667 - X_19627662_19627667_- 0.868298448 0.961328095 0.914813271 0.065781932 e(y)3 FBtr0334278 19626546 19628098 X - 19627598 19627693 3'utr e(y)3 FlyBase G69094.1 AACACCAAGTAGACCACGTTATGCTTAAGACTTTTTTAACGCCTAAGTTGAATAGCCTAGCACTAAGTCACAACTTCATTTGTTTCTAGTGAATTC 28 19627660 0.98952807 10 25 244 0.852941176 1.462397998 0.235294118 0.178571429 0.323529412 28 5 0 29 X:19627598-19627693 6 e(y)3 FBtr0334278 19626546 19628098 AAGACT 6mer3-8 dme-miR-14-3p X - 19627637 19627690 3'utr e(y)3 FlyBase G51961.1 ACCAAGTAGACCACGTTATGCTTAAGACTTTTTTAACGCCTAAGTTGAATAGCC 17 19627660 0.9905921 4 15 152 0.92 1.361727836 0.04 0.352941176 0.56 17 2 0 23 X:19627637-19627690 6 20.5 3485 FBgn0087008 1841.593333 29.13666667 44.69333333 0.011131665 0.703580826 0.458681384 -7 -7 -7 0.2 dme-miR-305-3p 7mer-m1 TGTGCCG X 19641392 19641398 - X_19641392_19641398_- 0.810990421 0.805395772 0.808193096 0.00395598 CG12237 FBtr0074761 19641189 19641776 X - 19641374 19641409 3'utr CG12237 FlyBase G69125.1 ATTTATATCTGTGTGCCGGGACTTTACCTGCAAAAC 20 19641396 0.827919462 5 20 160 1 1.397940009 0.12 0.25 0.4 20 0 0 25 X:19641374-19641409 7 CG12237 FBtr0074761 19641189 19641776 TGTGCCG 7mer-m1 dme-miR-305-3p X - 19641377 19641409 3'utr CG12237 FlyBase G51983.2 ATTTATATCTGTGTGCCGGGACTTTACCTGCAA 24 19641397 0.833313328 7 22 173 0.965517241 1.447158031 0.068965517 0.208333333 0.344827586 24 1 0 28 X:19641377-19641409 7 20.5 3486 FBgn0031048 357.4333333 25.82 39.46333333 0.057353353 0.793958172 0.51946955 -2 -1 -1.5 0.2 dme-miR-7-5p 6mer3-8 GTCTTC X 19644330 19644335 + X_19644330_19644335_+ 0.856507932 0.814298448 0.83540319 0.029846624 Sec61gamma FBtr0340610 19644092 19644518 X + 19644255 19644409 3'utr Sec61gamma FlyBase G62988.1 ACGTATTGTAATGTTTCGATATTCCATTCATGAACAAGTTAGTTAATAAGATTCAAATGTAAAAAGGAATCACCCGTCTTCATAGCATTTGTTTGGGGTGCGCATCCCCGCTAATAAATGTTAAATTGATTTTCCGTGTACAAATGAGATTCTTT 28 19644334 0.977875513 13 26 180 0.9375 1.477121255 0.1875 0.107142857 0.21875 28 2 0 30 X:19644255-19644409 6 Sec61gamma FBtr0074745|FBtr0344986|FBtr0340610 19644092|19644092|19644092 19644395|19644395|19644518 GTCTTC 6mer3-8 dme-miR-7-5p X + 19644309 19644364 3'utr Sec61gamma FlyBase G47521.1 AAATGTAAAAAGGAATCACCCGTCTTCATAGCATTTGTTTGGGGTGCGCATCCCCG 10 19644335 0.968631695 5 8 53 0.909090909 1 0.181818182 0.1 0.181818182 10 1 0 10 X:19644309-19644364 6 12 3487 FBgn0031049 488 95.01 145.01 0.024590164 0.126302494 0.082752914 -4 -5 -4.5 0.2 dme-miR-965-3p 8mer-A1 TACGCTTA X 19646812 19646819 - X_19646812_19646819_- 0.588490457 0.624834117 0.606662287 0.025698806 Ranbp21 FBtr0340614|FBtr0074759 19646304|19646587 19647574|19647574 X - 19646783 19646836 3'utr Ranbp21 FlyBase G69132.1 AGGAATATTTCTGAAATTACGCTTAGGTTTAGTTGATAGGCAAAAGTTATTATT 45 19646820 0.864449139 8 37 452 0.826923077 1.031408464 0.038461538 0.133333333 0.25 45 6 3 43 X:19646783-19646836 8 Ranbp21 FBtr0074759|FBtr0340614 19646587|19646304 19647574|19647574 TACGCTTA 8mer-A1 dme-miR-965-3p X - 19646790 19646842 3'utr Ranbp21 FlyBase G51991.1 ATTTGAAGGAATATTTCTGAAATTACGCTTAGGTTTAGTTGATAGGCAAAAGT 20 19646820 0.943693021 8 17 174 0.903225806 1.447158031 0.129032258 0.4 0.612903226 20 3 0 28 X:19646790-19646842 8 29.5 3488 FBgn0031051 883.0066667 17.98 27.40666667 0.033408581 1.640711902 1.076380443 1 1 1 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT X 19676314 19676320 - X_19676314_19676320_- 0.655532528 0.652461272 0.6539969 0.002171666 dome FBtr0074756 19676059 19676538 X - 19676265 19676454 3'utr dome FlyBase G69149.1 CTTCAGCCGCATATCCTTCCAACGCCATGATCTGGTCACCGGATCGCCCCAGCAACCAAAATCCAGGACGAGGAACCCAGAACCCAGAACCTGTAAACTAGAATCTGGAATCTGGAAACTAGAAACCACTGTCGGGCAGCTGTTTATAGTAATTAGTGAAAACTCCTCGGACGAATGTAGTTTTACGTTT 138 19676311 0.979771602 26 126 868 0.905660377 1.857332496 0.100628931 0.123188406 0.238993711 138 14 1 144 X:19676265-19676454 7 dome FBtr0074756 19676059 19676538 GGCAGCT 7mer-m8 dme-miR-980-3p X - 19676264 19676339 3'utr dome FlyBase G52002.1 AAACTAGAAACCACTGTCGGGCAGCTGTTTATAGTAATTAGTGAAAACTCCTCGGACGAATGTAGTTTTACGTTTG 58 19676311 0.751639616 10 53 404 0.896551724 1.892094603 0.068965517 0.344827586 0.563218391 58 9 0 78 X:19676264-19676339 7 70.5 3489 FBgn0043903 649.3333333 16.12333333 24.73333333 0.108572895 4.372544966 2.850404313 -9 -9 -9 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG X 19686435 19686441 + X_19686435_19686441_+ 0.671002516 0.670598594 0.670800555 0.0002856 Ubqn FBtr0074750|FBtr0340612 19686065|19686065 19687240|19687658 X + 19686344 19686472 3'utr Ubqn FlyBase G63041.1 AACGAGCATAGTTGCCTCGAGATCGGAGAGATACTAGATATAGGTGGGTGATATGAATGACGCCGGTGAGAATGTTAGATAGGGATCGCATACCAAAGTGTTAGCACTTTCGTAGTTGATATCAGATTT 50 19686434 0.97752748 13 48 315 0.965517241 1.748188027 0.24137931 0.12 0.24137931 50 2 0 56 X:19686344-19686472 7 Ubqn FBtr0074750|FBtr0340612 19686065|19686065 19687240|19687658 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 19686353 19686460 3'utr Ubqn FlyBase G47549.1 AGTTGCCTCGAGATCGGAGAGATACTAGATATAGGTGGGTGATATGAATGACGCCGGTGAGAATGTTAGATAGGGATCGCATACCAAAGTGTTAGCACTTTCGTAGTT 40 19686442 0.962332356 13 36 226 0.916666667 1.439332694 0.166666667 0.375 0.583333333 40 4 1 55 X:19686353-19686460 7 25 3490 FBgn0031057 2464.196667 86.81666667 133.1533333 0.010145294 0.287963141 0.187753467 1 -7 -3 0.2 dme-miR-79-3p 6mer2-7 AGCTTT X 19687401 19687406 + X_19687401_19687406_+ 0.635740036 0.989526956 0.812633496 0.250165187 Ubqn FBtr0340612 19686065 19687658 X + 19687391 19687534 3'utr Ubqn FlyBase G63047.1 ACTTTCGAAAAGCTTTCCTTCGCGCGCTCACCGTTTATATAAGATATGGATTCAGTGTATACCCTGTAAGTGCTACCACCACATAGCCTCGCTCGTCCGCTGTGGGATTGGCTGGTCGGCCGGCTGGCTGGCTGGCCGGCTGGC 27 19687406 0.981930927 16 25 179 0.928571429 1.414973348 0.214285714 0.037037037 0.071428571 27 2 0 26 X:19687391-19687534 6 Ubqn FBtr0340612 19686065 19687658 AGCTTT 6mer2-7 dme-miR-79-3p X + 19687396 19687482 3'utr Ubqn FlyBase G47552.1 CGAAAAGCTTTCCTTCGCGCGCTCACCGTTTATATAAGATATGGATTCAGTGTATACCCTGTAAGTGCTACCACCACATAGCCTCGC 16 19687407 0.981339348 9 14 94 0.80952381 1.230448921 0.285714286 0.25 0.428571429 16 4 0 17 X:19687396-19687482 6 8 3491 FBgn0031057 2464.196667 86.81666667 133.1533333 0.003246494 0.092148205 0.060081109 -5 -6 -5.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 19694392 19694398 - X_19694392_19694398_- 0.792692268 0.790771349 0.791731808 0.001358352 CG14229 FBtr0335023|FBtr0335023|FBtr0335023|FBtr0074753|FBtr0074753|FBtr0074753|FBtr0344968|FBtr0344968|FBtr0344968 19693975|19693975|19693975|19694196|19694196|19694196|19694196|19694196|19694196 19694566|19694566|19694566|19694566|19694566|19694566|19694566|19694566|19694566 X - 19694348 19694462 3'utr CG14229 FlyBase G69165.1 CGCCTCCGTTCAGTCTTCTCTGCGCACGGATTCGGATATCCGTGTCTGGAGTCACTTGCGTTTGTGTGATAAGCATTGTTTACTTGCATGGCATTAGCATCACCCCTGATGCATA 74 19694400 0.718083136 18 69 579 0.939759036 1.591064607 0.13253012 0.121621622 0.21686747 74 4 1 78 X:19694348-19694462 7 CG14229 FBtr0344968|FBtr0344968|FBtr0344968|FBtr0074753|FBtr0074753|FBtr0074753|FBtr0335023|FBtr0335023|FBtr0335023 19694196|19694196|19694196|19694196|19694196|19694196|19693975|19693975|19693975 19694566|19694566|19694566|19694566|19694566|19694566|19694566|19694566|19694566 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 19694354 19694426 3'utr CG14229 FlyBase G52014.1 TATCCGTGTCTGGAGTCACTTGCGTTTGTGTGATAAGCATTGTTTACTTGCATGGCATTAGCATCACCCCTGA 42 19694400 0.896901871 9 35 332 0.861538462 1.748188027 0.092307692 0.333333333 0.569230769 42 9 0 56 X:19694354-19694426 7 37 3492 FBgn0031059 134 20.55333333 31.35333333 0.276119403 1.800194616 1.18009781 2 2 2 0.2 dme-miR-7-5p 7mer-m8 GTCTTCC X 19699007 19699013 + X_19699007_19699013_+ 0.48851615 0.461355284 0.474935717 0.019205586 Cdc42 FBtr0309215|FBtr0074751|FBtr0309214 19698593|19698593|19698593 19699938|19699252|19699938 X + 19698958 19699065 3'utr Cdc42 FlyBase G63059.1 TTGGTCCACTGTGACCAGGCGGCTGGGCAGTTGCCCCCAACTCGGGACAGTCTTCCGCCCCACAAGCTTCAGCTCCAATCCCCGCCAGGATCCAATCGCAGCCAATCG 38 19699010 0.92036885 9 36 149 0.952380952 1.602059991 0.047619048 0.105263158 0.19047619 38 2 0 40 X:19698958-19699065 7 Cdc42 FBtr0309214|FBtr0074751|FBtr0309215 19698593|19698593|19698593 19699938|19699252|19699938 GTCTTCC 7mer-m8 dme-miR-7-5p X + 19698937 19699038 3'utr Cdc42 FlyBase G47559.1 TATTTTGGTCGGTTTCTATGTTTGGTCCACTGTGACCAGGCGGCTGGGCAGTTGCCCCCAACTCGGGACAGTCTTCCGCCCCACAAGCTTCAGCTCCAATCC 27 19699010 0.932785867 4 25 106 1 1.568201724 0.027027027 0.333333333 0.513513514 27 0 0 37 X:19698937-19699038 7 25.5 3493 FBgn0010341 5859.21 357.3733333 549.4666667 0.004352123 0.071353953 0.046408639 -3 -3 -3 0.2 dme-miR-8-3p 6mer2-7 AGTATT X 19699536 19699541 + X_19699536_19699541_+ 0.999975759 0.999771418 0.999873589 0.000144533 Cdc42 FBtr0309215|FBtr0309214 19698593|19698593 19699938|19699938 X + 19699287 19699658 3'utr Cdc42 FlyBase G63061.1 AAAAACAATCCAGAACAGAACAGAATGTGGGGCGATTCGAAAAGAACCATGCACTTATTCGTTTTGCCTCAGTCGATGAAATCCGCGGGAATCCACGTCGATATTGTCCCGAAAGGAGCAACGTGCGAGAATTATATTAAATATTTATGATAACTGATCGCGTAATGTTTAAACAGCGGAGGTCGGATGGAATTCGCTAGCATGCAGATATGAAAGTGAAGCTTATTATGTAATAAAACTAAGCGTATGAGTATTGAAATATGATTAAAAGTAAATTAAATGAACCTAAAGGAGGAGATAAAGGATCAGCAAGAGATGCGAGAACCGAACTAGGCGTTGCAACCACAACACAAACACACATCTGAAATCTAC 81 19699534 0.965086363 37 76 399 0.951456311 1.69019608 0.213592233 0.222222222 0.388349515 81 4 1 98 X:19699287-19699658 6 Cdc42 FBtr0309214|FBtr0309215 19698593|19698593 19699938|19699938 AGTATT 6mer2-7 dme-miR-8-3p X + 19699424 19699657 3'utr Cdc42 FlyBase G47561.1 TAAATATTTATGATAACTGATCGCGTAATGTTTAAACAGCGGAGGTCGGATGGAATTCGCTAGCATGCAGATATGAAAGTGAAGCTTATTATGTAATAAAACTAAGCGTATGAGTATTGAAATATGATTAAAAGTAAATTAAATGAACCTAAAGGAGGAGATAAAGGATCAGCAAGAGATGCGAGAACCGAACTAGGCGTTGCAACCACAACACAAACACACATCTGAAATCTA 42 19699534 0.965544632 22 39 211 0.93220339 1.263241435 0.220338983 0.333333333 0.525423729 42 2 2 55 X:19699424-19699657 6 15.5 3494 FBgn0010341 5859.21 357.3733333 549.4666667 0.002645408 0.043372011 0.028209173 2 2 2 0.2 dme-miR-277-3p 7mer-m8 TGCATTT X 19699819 19699825 + X_19699819_19699825_+ 0.577865337 0.544381635 0.561123486 0.023676551 Cdc42 FBtr0309215|FBtr0309214 19698593|19698593 19699938|19699938 X + 19699784 19699841 3'utr Cdc42 FlyBase G63062.1 AAAACGACAAAAGATGAAAGGAAAATAAGAACTAATGCATTTTTTAATATTTTTATAT 25 19699809 0.968571233 6 24 147 0.931034483 1.431363764 0.068965517 0.12 0.24137931 25 2 0 27 X:19699784-19699841 7 Cdc42 FBtr0309214|FBtr0309215 19698593|19698593 19699938|19699938 TGCATTT 7mer-m8 dme-miR-277-3p X + 19699799 19699842 3'utr Cdc42 FlyBase G47562.1 GAAAGGAAAATAAGAACTAATGCATTTTTTAATATTTTTATATG 16 19699809 0.954251777 6 15 81 1 1.380211242 0.166666667 0.4375 0.625 16 0 0 24 X:19699799-19699842 7 18.5 3495 FBgn0010341 5859.21 357.3733333 549.4666667 0.003157422 0.051766593 0.033669012 10 10 10 0.2 dme-miR-2b-2-5p 7mer-m8 TTGAAGA X 19734300 19734306 + X_19734300_19734306_+ 0.629363925 0.458066987 0.543715456 0.1211252 AP-1-2beta FBtr0074789 19734229 19734581 X + 19734229 19734315 stop_codon AP-1-2beta FlyBase G63090.1 AAGCGTTCCATGGCGCACATCCGATGGCATAGGATAAGCACAAAGCAATTGGAGCTATCGATTTGCGTGTGTTGAAGATTAGCTCAA 26 19734307 0.939278263 7 26 158 1 1.531478917 0.058823529 0.269230769 0.441176471 26 0 0 34 X:19734229-19734315 7 AP-1-2beta FBtr0074789 19734229 19734581 TTGAAGA 7mer-m8 dme-miR-2b-2-5p X + 19734287 19734319 3'utr AP-1-2beta FlyBase G47580.1 CGATTTGCGTGTGTTGAAGATTAGCTCAACAAT 11 19734307 0.819959957 2 11 82 1 1.204119983 0.0625 0.363636364 0.5625 11 0 0 16 X:19734287-19734319 7 12 3496 FBgn0010380 943.23 35.09 53.51 0.012722242 0.341977771 0.224257148 -7 -7 -7 0.2 dme-miR-308-3p 7mer-m1 TGTGATT X 19741426 19741432 - X_19741426_19741432_- 0.520722436 0.521123522 0.520922979 0.000283621 CG18809 FBtr0331746|FBtr0331747|FBtr0074811|FBtr0074810 19741222|19741222|19741222|19741222 19741779|19741779|19741779|19741779 X - 19741401 19741454 3'utr CG18809 FlyBase G69186.1 CGCAAACTGAAGAACTAACCATTGTGATTTATATATCTATCTCTTCCTTCCCGT 14 19741433 0.983668026 5 14 110 1 1.255272505 0 0.285714286 0.444444444 14 0 0 18 X:19741401-19741454 7 CG18809 FBtr0074810|FBtr0074811|FBtr0331747|FBtr0331746 19741222|19741222|19741222|19741222 19741779|19741779|19741779|19741779 TGTGATT 7mer-m1 dme-miR-308-3p X - 19741399 19741450 3'utr CG18809 FlyBase G52035.1 AACTGAAGAACTAACCATTGTGATTTATATATCTATCTCTTCCTTCCCGTTT 7 19741433 0.989581504 3 7 68 1 0.954242509 0.222222222 0.142857143 0.333333333 7 0 0 9 X:19741399-19741450 7 10 3497 FBgn0042132 250.6633333 14.18333333 21.89333333 0.039894148 0.705052879 0.456760049 1 1 1 0.2 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG X 19745346 19745352 + X_19745346_19745352_+ 0.670757899 0.616367844 0.643562871 0.038459609 Rpp20 FBtr0091935|FBtr0346040 19745104|19745104 19745747|19745898 X + 19745222 19745365 3'utr Rpp20 FlyBase G63095.1 AGGCCAGGGCCGGACCCGGTGGCATACTCCCGGAGCCCATGGGCGACTGGTTCACCGTCTTCAGCCCCCTGTTCTTCATCGACATCTGCAACGCGTACTTTTGCGTCATTGTGGGCATCCGCATGTACCTGGACTCTAACAACA 71 19745345 0.972000771 10 71 410 1 1.939519253 0.091954023 0.183098592 0.333333333 71 0 0 87 X:19745222-19745365 7 Rpp20 FBtr0346040|FBtr0091935 19745104|19745104 19745898|19745747 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" X + 19745321 19745368 3'utr Rpp20 FlyBase G47585.2 TTTGCGTCATTGTGGGCATCCGCATGTACCTGGACTCTAACAACAAGC 49 19745345 0.830790965 4 49 277 1 1.86923172 0 0.367346939 0.581081081 49 0 0 74 X:19745321-19745368 7 55.5 3498 FBgn0066304 95 9.253333333 14.03666667 0.584210526 5.997838617 3.953930183 1 1 1 0.2 dme-miR-308-3p 7mer-m1 TGTGATT X 19758906 19758912 + X_19758906_19758912_+ 0.521198374 0.521177799 0.521188086 1.46E-05 Pmp70 FBtr0335155|FBtr0074795|FBtr0335157|FBtr0335156 19758756|19758756|19758756|19758756 19759280|19759280|19759280|19759280 X + 19758879 19758925 3'utr Pmp70 FlyBase G63114.1 AAGTTGGAAATGCTTCCTTGTTTCGATTGTGATTGTTTCTTTTGTAC 47 19758905 0.687773863 6 45 588 0.960784314 1.389166084 0.098039216 0.085106383 0.156862745 47 1 1 49 X:19758879-19758925 7 Pmp70 FBtr0335156|FBtr0335157|FBtr0074795|FBtr0335155 19758756|19758756|19758756|19758756 19759280|19759280|19759280|19759280 TGTGATT 7mer-m1 dme-miR-308-3p X + 19758875 19758919 3'utr Pmp70 FlyBase G47596.1 TTGCAAGTTGGAAATGCTTCCTTGTTTCGATTGTGATTGTTTCTT 39 19758912 0.876690919 8 36 468 0.925925926 1.096910013 0 0.307692308 0.5 39 1 3 50 X:19758875-19758919 7 42 3499 FBgn0031069 864.5033333 34.21666667 52.20333333 0.048582809 1.227471992 0.804546325 1 -6 -2.5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG X 19759091 19759096 + X_19759091_19759096_+ 0.781866596 0.673921184 0.72789389 0.076328924 Pmp70 FBtr0335155|FBtr0074795|FBtr0335157|FBtr0335156 19758756|19758756|19758756|19758756 19759280|19759280|19759280|19759280 X + 19759021 19759173 3'utr Pmp70 FlyBase G63115.1 AAAGTAGTCGGCGCACAGCCACAAGCGATGGATGAGCGTTTAGAAAAGCTTTTAGTGAATAACACACCCATACCTGTAGTAGACCTGCATACCGCACAAGTCCCAAATCGCGCATAGAGAACTTATAGTAATTTGTAAAATACGCTTGGCTTA 35 19759096 0.975478859 15 33 208 0.951219512 1.591064607 0.12195122 0.142857143 0.268292683 35 2 0 39 X:19759021-19759173 6 Pmp70 FBtr0335156|FBtr0335157|FBtr0074795|FBtr0335155 19758756|19758756|19758756|19758756 19759280|19759280|19759280|19759280 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" X + 19759037 19759111 3'utr Pmp70 FlyBase G47598.1 AGCCACAAGCGATGGATGAGCGTTTAGAAAAGCTTTTAGTGAATAACACACCCATACCTGTAGTAGACCTGCATA 9 19759097 0.9629874 5 7 42 0.9375 1.176091259 0.0625 0.444444444 0.6875 9 1 0 15 X:19759037-19759111 6 10 3500 FBgn0031069 864.5033333 34.21666667 52.20333333 0.011567335 0.292255236 0.191558649 -5 -6 -5.5 0.2 dme-miR-79-3p 6mer3-8 TAGCTT X 19759339 19759344 - X_19759339_19759344_- 0.917935597 0.999438336 0.958686966 0.057631112 CG12702 FBtr0074809|FBtr0335137|FBtr0346378 19759171|19759171|19759171 19759370|19759370|19759370 X - 19759296 19759348 3'utr CG12702 FlyBase G69188.1 AATATAGCTTAGACTAGTAGCATCTATCGATGAACTCCACTCCGCCGGCATCA 17 19759340 0.892375292 4 15 111 0.842105263 1.204119983 0.052631579 0.117647059 0.210526316 17 3 0 16 X:19759296-19759348 6 CG12702 FBtr0346378|FBtr0335137|FBtr0074809 19759171|19759171|19759171 19759370|19759370|19759370 TAGCTT 6mer3-8 dme-miR-79-3p X - 19759297 19759350 3'utr CG12702 FlyBase G52036.1 TTAATATAGCTTAGACTAGTAGCATCTATCGATGAACTCCACTCCGCCGGCATC 6 19759340 0.980243268 3 6 45 1 0.903089987 0 0.333333333 0.5 6 0 0 8 X:19759297-19759350 6 7.5 3501 FBgn0031070 235.6866667 9.673333333 14.61 0.03182191 0.77532736 0.513347023 -4 -4 -4 0.2 dme-miR-8-3p 6mer2-7 AGTATT X 19832499 19832504 - X_19832499_19832504_- 0.997672133 0.99999999 0.998836061 0.001646074 pico FBtr0074804|FBtr0303995|FBtr0074805|FBtr0303996 19831605|19831605|19830213|19831605 19833338|19833338|19833338|19833338 X - 19832410 19832526 3'utr pico FlyBase G69207.1 TTTTAATTGTTTAGTTGCTCGTAGTATTGATTTTATACATTATATCTTTTTTTTGCGATTATCTTTGTAACGGTAGAGTGAACGTTTTGTGAGCGCATGAAATGCGCTGCGCTAGCA 31 19832495 0.993480905 11 30 371 0.972972973 1.556302501 0.189189189 0.161290323 0.297297297 31 1 0 36 X:19832410-19832526 6 pico FBtr0074804|FBtr0303995|FBtr0074805|FBtr0303996 19831605|19831605|19830213|19831605 19833338|19833338|19833338|19833338 AGTATT 6mer2-7 dme-miR-8-3p X - 19832481 19832525 3'utr pico FlyBase G52052.1 TTTAATTGTTTAGTTGCTCGTAGTATTGATTTTATACATTATATC 13 19832495 0.871755906 8 11 153 0.772727273 1.230448921 0 0.538461538 0.727272727 13 5 0 17 X:19832481-19832525 6 18.5 3502 FBgn0261811 2157.516667 40.99333333 63.13 0.008574673 0.451292893 0.293046095 -9 -9 -9 0.2 dme-miR-277-3p 7mer-m8 TGCATTT X 19832607 19832613 - X_19832607_19832613_- 0.614325249 0.612703739 0.613514494 0.001146574 pico FBtr0074804|FBtr0303995|FBtr0074805|FBtr0303996 19831605|19831605|19830213|19831605 19833338|19833338|19833338|19833338 X - 19832592 19832637 3'utr pico FlyBase G69208.1 ATTTTAGTTTGTAAAAAGGAAAAATGCATTTTAGAAACGATAGTGC 19 19832610 0.85823377 6 18 151 0.956521739 1.342422681 0.086956522 0.210526316 0.347826087 19 1 0 22 X:19832592-19832637 7 pico FBtr0074804|FBtr0303995|FBtr0074805|FBtr0303996 19831605|19831605|19830213|19831605 19833338|19833338|19833338|19833338 TGCATTT 7mer-m8 dme-miR-277-3p X - 19832584 19832637 3'utr pico FlyBase G52053.1 ATTTTAGTTTGTAAAAAGGAAAAATGCATTTTAGAAACGATAGTGCATTATTTA 13 19832611 0.978217934 5 12 94 0.941176471 1.204119983 0 0.230769231 0.411764706 13 1 0 16 X:19832584-19832637 7 14.5 3503 FBgn0261811 2157.516667 40.99333333 63.13 0.00672069 0.353716051 0.229684777 -3 -2 -2.5 0.2 dme-miR-8-3p 7mer-m8 CAGTATT X 19905160 19905166 + X_19905160_19905166_+ 0.661578308 0.661581605 0.661579957 2.33E-06 Hers FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800|FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19906687|19906687|19906687|19906687|19908108|19908108|19906687|19906687 X + 19905142 19905178 3'utr Hers FlyBase G63193.1 ATTGTTTTGATCAGTCTACAGTATTGTTAAAGATATT 19 19905158 0.612760804 6 17 186 0.9 1.255272505 0 0.052631579 0.1 19 2 0 18 X:19905142-19905178 7 Hers FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523|FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19908108|19908108|19906687|19906687|19906687|19906687|19906687|19906687 CAGTATT 7mer-m8 dme-miR-8-3p X + 19905127 19905180 3'utr Hers FlyBase G47652.1 TAGAGAGAAAGTTACATTGTTTTGATCAGTCTACAGTATTGTTAAAGATATTTT 19 19905157 0.989674669 8 18 176 0.961538462 1.397940009 0.192307692 0.263157895 0.461538462 19 1 0 25 X:19905127-19905180 7 18 3504 FBgn0052529 4274.003333 62.55666667 96.43 0.004211508 0.287739117 0.186663901 2 3 2.5 0.2 dme-miR-932-5p 7mer-m8 GGAATTG X 19905694 19905700 + X_19905694_19905700_+ 0.701410843 0.702972564 0.702191704 0.001104359 Hers FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800|FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19906687|19906687|19906687|19906687|19908108|19908108|19906687|19906687 X + 19905608 19905705 3'utr Hers FlyBase G63197.1 AAGTTGTATGTATTTATTATCATTAATATCGAGTAAGTCAGCATTCTGTGTACAGTTTTCCGCTCGCTTTTGCTCTAATCGCTCAAGGAATTGGTTTA 22 19905678 0.777246745 14 20 205 0.916666667 1.041392685 0.208333333 0.090909091 0.166666667 22 1 1 22 X:19905608-19905705 7 Hers FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523|FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19908108|19908108|19906687|19906687|19906687|19906687|19906687|19906687 GGAATTG 7mer-m8 dme-miR-932-5p X + 19905638 19905711 3'utr Hers FlyBase G47656.1 GAGTAAGTCAGCATTCTGTGTACAGTTTTCCGCTCGCTTTTGCTCTAATCGCTCAAGGAATTGGTTTAACCACC 12 19905665 0.985472996 9 11 95 0.947368421 1.255272505 0.263157895 0.5 0.684210526 12 1 0 18 X:19905638-19905711 7 3.5 3505 FBgn0052529 4274.003333 62.55666667 96.43 0.000818904 0.055949273 0.036295759 16 29 22.5 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC X 19906402 19906408 + X_19906402_19906408_+ 0.66104893 0.661102415 0.661075672 3.78E-05 Hers FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800|FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19906687|19906687|19906687|19906687|19908108|19908108|19906687|19906687 X + 19906234 19906460 3'utr Hers FlyBase G63201.1 TCTAACTATAATTTCTGACATATTTGAGATTTCTGGCTCCAGAGGCGGAAAACTGGATGGCTTGACATCGATCCTTGCTAGGCGCTGTTGGTATATATTTTTATTTGTTGTTAGTTTTTGTAAGCGATTGAACACACATTTTGTACTCTTGATTTGACATTTATCTTTTGTGTTCGCCTTAGTTTGGAAATTTGATTTCAGAGACATGATTTTCTTTCGGTTAACTA 99 19906401 0.965066754 35 93 938 0.947826087 2.037426498 0.252173913 0.141414141 0.260869565 99 6 0 109 X:19906234-19906460 7 Hers FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523|FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19908108|19908108|19906687|19906687|19906687|19906687|19906687|19906687 TGTGTTC 7mer-m8 dme-miR-317-3p X + 19906244 19906445 3'utr Hers FlyBase G47659.1 ATTTCTGACATATTTGAGATTTCTGGCTCCAGAGGCGGAAAACTGGATGGCTTGACATCGATCCTTGCTAGGCGCTGTTGGTATATATTTTTATTTGTTGTTAGTTTTTGTAAGCGATTGAACACACATTTTGTACTCTTGATTTGACATTTATCTTTTGTGTTCGCCTTAGTTTGGAAATTTGATTTCAGAGACATGATTT 41 19906401 0.989288363 20 40 390 0.984375 1.799340549 0.171875 0.43902439 0.640625 41 1 0 63 X:19906244-19906445 7 14 3506 FBgn0052529 4274.003333 62.55666667 96.43 0.003275617 0.223797091 0.145183034 1 1 1 0.2 dme-miR-995-5p 7mer-A1 ATTCGGA X 20157242 20157248 - X_20157242_20157248_- 0.753254613 0.782911823 0.768083218 0.020970807 Rab35 FBtr0070028|FBtr0333549|FBtr0333548|FBtr0303258 20156477|20155764|20157143|20157088 20157582|20157582|20157582|20157582 X - 20157214 20157254 3'utr Rab35 FlyBase G69239.1 AGTTTTATTCGGAATAATGCCAGATAGCCGTAAATTAAAGT 13 20157237 0.808350991 3 12 73 0.941176471 1.204119983 0 0.230769231 0.411764706 13 1 0 16 X:20157214-20157254 7 Rab35 FBtr0303258|FBtr0333548|FBtr0333549|FBtr0070028 20157088|20157143|20155764|20156477 20157582|20157582|20157582|20157582 ATTCGGA 7mer-A1 dme-miR-995-5p X - 20157224 20157264 3'utr Rab35 FlyBase G52073.1 TTTCCTCCTCAGTTTTATTCGGAATAATGCCAGATAGCCGT 5 20157237 0.980659776 3 5 42 1 0.903089987 0 0.4 0.625 5 0 0 8 X:20157224-20157264 7 8.5 3507 FBgn0031090 1038.15 62.16666667 96 0.008187641 0.136729223 0.088541667 -11 -11 -11 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA X 20168120 20168126 - X_20168120_20168126_- 0.823344249 0.823341342 0.823342796 2.05E-06 CG9581 FBtr0070026 20168040 20168150 X - 20168093 20168150 3'utr CG9581 FlyBase G69253.1 GAGCTCACAACGAAAACCAAATTCCTAGTCATAAGCCTTTCATTCTCCCGACAACCTT 29 20168129 0.96095212 4 28 138 0.945945946 1.544068044 0.216216216 0.275862069 0.432432432 29 2 0 35 X:20168093-20168150 7 CG9581 FBtr0070026 20168040 20168150 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X - 20168043 20168144 3'utr CG9581 FlyBase G52079.1 ACAACGAAAACCAAATTCCTAGTCATAAGCCTTTCATTCTCCCGACAACCTTATGAGCTGATTTGGGTCCTAAAGTAAAGGCAGATGCTGTATTTATAAATG 20 20168128 0.975116322 6 18 113 0.884615385 1.361727836 0.153846154 0.25 0.423076923 20 3 0 23 X:20168043-20168144 7 21.5 3508 FBgn0031093 169.6733333 10.98333333 16.82 0.126714078 1.957511381 1.27824019 3 2 2.5 0.2 dme-miR-305-3p 6mer2-7 TGTGCC X 20171524 20171529 - X_20171524_20171529_- 0.921930252 0.999999568 0.96096491 0.055203331 AnxB10 FBtr0070025|FBtr0301931 20171443|20171443 20171591|20171591 X - 20171468 20171552 3'utr AnxB10 FlyBase G69260.1 CGTGTTAATAGCTTTGATCGTAGTGTGCCTTTTAGGAAAATCGCTTTTAATGTCGTCTGCGCATGCGCACACTGTTGGCAATAAA 32 20171521 0.89442581 12 30 259 0.951219512 1.591064607 0.219512195 0.1875 0.365853659 32 2 0 39 X:20171468-20171552 6 AnxB10 FBtr0070025|FBtr0301931 20171443|20171443 20171591|20171591 TGTGCC 6mer2-7 dme-miR-305-3p X - 20171474 20171539 3'utr AnxB10 FlyBase G52084.1 TTGATCGTAGTGTGCCTTTTAGGAAAATCGCTTTTAATGTCGTCTGCGCATGCGCACACTGTTGGC 19 20171521 0.981546168 10 17 125 0.925925926 1.397940009 0.296296296 0.421052632 0.592592593 19 2 0 25 X:20171474-20171539 6 17 3509 FBgn0000084 609.39 60.31 92.3 0.027896749 0.281876969 0.184182015 -8 -8 -8 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 20182235 20182240 - X_20182235_20182240_- 0.995339557 0.988616153 0.991977855 0.004754162 Sdic2 FBtr0345925|FBtr0345925|FBtr0345925|FBtr0089610|FBtr0089610|FBtr0089610|FBtr0345926|FBtr0345926|FBtr0345926 20181741|20181741|20181741|20182036|20182036|20182036|20181588|20181588|20181588 20182337|20182337|20182337|20182337|20182337|20182337|20182337|20182337|20182337 X - 20182216 20182249 3'utr Sdic2 FlyBase G69266.1 TGTATCTTTTGTGATCCCGCTACTGTGTATAGCC 11 20182241 0.879786836 4 11 103 1 1.146128036 0.142857143 0.181818182 0.357142857 11 0 0 14 X:20182216-20182249 6 Sdic2 FBtr0345926|FBtr0345926|FBtr0345926|FBtr0089610|FBtr0089610|FBtr0089610|FBtr0345925|FBtr0345925|FBtr0345925 20181588|20181588|20181588|20182036|20182036|20182036|20181741|20181741|20181741 20182337|20182337|20182337|20182337|20182337|20182337|20182337|20182337|20182337 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 20182224 20182250 3'utr Sdic2 FlyBase G52087.1 TTGTATCTTTTGTGATCCCGCTACTGT 6 20182242 0.677388768 2 6 60 1 1.041392685 0.181818182 0.833333333 0.909090909 6 0 0 11 X:20182224-20182250 6 8.5 3510 FBgn0053497 6.756666667 0.41 0.633333333 1.258016774 20.73170732 13.42105263 1 2 1.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 20228616 20228621 - X_20228616_20228621_- 0.993585682 0.992570134 0.993077908 0.000718138 sw FBtr0089402|FBtr0089402|FBtr0089402|FBtr0340361|FBtr0340361|FBtr0340361|FBtr0089397|FBtr0089397|FBtr0089397|FBtr0089409|FBtr0089409|FBtr0089409|FBtr0089399|FBtr0089399|FBtr0089399|FBtr0089403|FBtr0089403|FBtr0089403|FBtr0089407|FBtr0089407|FBtr0089407|FBtr0089408|FBtr0089408|FBtr0089408|FBtr0089398|FBtr0089398|FBtr0089398|FBtr0089401|FBtr0089401|FBtr0089401|FBtr0089400|FBtr0089400|FBtr0089400|FBtr0089404|FBtr0089404|FBtr0089404|FBtr0089406|FBtr0089406|FBtr0089406|FBtr0340360|FBtr0340360|FBtr0340360|FBtr0089405|FBtr0089405|FBtr0089405 20227959|20227959|20227959|20227959|20227959|20227959|20228122|20228122|20228122|20228122|20228122|20228122|20227959|20227959|20227959|20227959|20227959|20227959|20228122|20228122|20228122|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20228122|20228122|20228122|20228122|20228122|20228122|20227959|20227959|20227959|20228122|20228122|20228122 20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718 X - 20228606 20228632 3'utr sw FlyBase G69279.1 TTTGTATCTTTTGTGATCCCGCTACTG 7 20228622 0.655741663 2 6 62 0.875 0.84509804 0.375 0.142857143 0.25 7 1 0 7 X:20228606-20228632 6 sw FBtr0089403|FBtr0089403|FBtr0089403|FBtr0089404|FBtr0089404|FBtr0089404|FBtr0089407|FBtr0089407|FBtr0089407|FBtr0340360|FBtr0340360|FBtr0340360|FBtr0089402|FBtr0089402|FBtr0089402|FBtr0340361|FBtr0340361|FBtr0340361|FBtr0089408|FBtr0089408|FBtr0089408|FBtr0089409|FBtr0089409|FBtr0089409|FBtr0089399|FBtr0089399|FBtr0089399|FBtr0089401|FBtr0089401|FBtr0089401|FBtr0089406|FBtr0089406|FBtr0089406|FBtr0089405|FBtr0089405|FBtr0089405|FBtr0089398|FBtr0089398|FBtr0089398|FBtr0089400|FBtr0089400|FBtr0089400|FBtr0089397|FBtr0089397|FBtr0089397 20227959|20227959|20227959|20228122|20228122|20228122|20228122|20228122|20228122|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20228122|20228122|20228122|20227959|20227959|20227959|20227959|20227959|20227959|20228122|20228122|20228122|20228122|20228122|20228122|20227959|20227959|20227959|20227959|20227959|20227959|20228122|20228122|20228122 20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 20228608 20228632 3'utr sw FlyBase G52093.1 TTTGTATCTTTTGTGATCCCGCTAC 7 20228622 0.694488948 2 6 61 0.9 0.954242509 0.2 0.285714286 0.5 7 1 0 9 X:20228608-20228632 6 7 3511 FBgn0003654 899.0166667 37.47 57.48333333 0.007786285 0.18681612 0.121774427 1 1 1 0.2 dme-miR-14-3p 6mer3-8 AAGACT X 20248355 20248360 - X_20248355_20248360_- 0.9956383 0.998864572 0.997251436 0.002281339 CG17068 FBtr0077341 20248307 20248868 X - 20248345 20248371 3'utr CG17068 FlyBase G69281.1 AAGATTTACACAAGACTAAATTGGTAT 13 20248366 0.585355024 4 13 69 1 1.230448921 0.058823529 0.307692308 0.470588235 13 0 0 17 X:20248345-20248371 6 CG17068 FBtr0077341 20248307 20248868 AAGACT 6mer3-8 dme-miR-14-3p X - 20248341 20248376 3'utr CG17068 FlyBase G52095.1 ATTTTAAGATTTACACAAGACTAAATTGGTATATTT 9 20248367 0.766538447 3 8 54 0.916666667 1.041392685 0.083333333 0.222222222 0.416666667 9 1 0 11 X:20248341-20248376 6 11 3512 FBgn0031098 134.3766667 5.846666667 8.906666667 0.08185945 1.881413911 1.23502994 6 7 6.5 0.2 dme-miR-184-3p 6mer3-8 TCCGTC X 2025349 2025354 - X_2025349_2025354_- 0.973981393 0.973293759 0.973637576 0.000486207 Actn FBtr0070343|FBtr0310659|FBtr0310657|FBtr0070345|FBtr0070344|FBtr0310658|FBtr0333802|FBtr0333801|FBtr0303048 2025114|2025114|2024754|2023820|2025114|2025114|2025114|2025114|2025114 2025540|2025540|2025540|2025540|2025540|2025540|2025540|2025540|2025540 X - 2025316 2025364 3'utr Actn FlyBase G64175.1 TTTATTAATTTCCGTCTCGAGCCGATGTATGCGACCCACACATACAAAA 9 2025355 0.98348232 3 9 72 1 0.954242509 0 0 0 9 0 0 9 X:2025316-2025364 6 Actn FBtr0310658|FBtr0333802|FBtr0333801|FBtr0303048|FBtr0070343|FBtr0310657|FBtr0310659|FBtr0070345|FBtr0070344 2025114|2025114|2025114|2025114|2025114|2024754|2025114|2023820|2025114 2025540|2025540|2025540|2025540|2025540|2025540|2025540|2025540|2025540 TCCGTC 6mer3-8 dme-miR-184-3p X - 2025336 2025363 3'utr Actn FlyBase G48376.1 TTATTAATTTCCGTCTCGAGCCGATGTA 9 2025355 0.706860117 2 9 67 1 1.113943352 0 0.222222222 0.461538462 9 0 0 13 X:2025336-2025363 6 9 3513 FBgn0000667 602.5766667 20.25333333 31.07 0.014935859 0.444371297 0.289668491 1 1 1 0.2 dme-miR-968-5p 7mer-A1 CTACTTA X 20254010 20254016 + X_20254010_20254016_+ 0.637755691 0.395250152 0.516502921 0.171477284 Rab10 FBtr0077337 20253262 20254691 X + 20253901 20254037 3'utr Rab10 FlyBase G63216.1 GCACTCCCCAGCCGCCCCACTTAGTGTTTCGTTTTTGTTTTGCGTTTCAGCCTAGATATAAATAACACCTATACATATTATACATCGGATAGTAGTATATAGCCTATACCTACTTAGCTTGCTTTCGCTTTCTATGT 27 20254014 0.989341826 14 26 254 0.96875 1.491361694 0.1875 0.185185185 0.3125 27 1 0 31 X:20253901-20254037 7 Rab10 FBtr0077337 20253262 20254691 CTACTTA 7mer-A1 dme-miR-968-5p X + 20254000 20254033 3'utr Rab10 FlyBase G47668.1 TAGCCTATACCTACTTAGCTTGCTTTCGCTTTCT 7 20254014 0.72095455 4 6 59 0.866666667 1.113943352 0 0.571428571 0.8 7 2 0 13 X:20254000-20254033 7 8.5 3514 FBgn0015789 1230.126667 63.84666667 97.75 0.006909858 0.133131461 0.086956522 -4 -4 -4 0.2 dme-bantam-3p 6mer3-8 TGATCT X 2039002 2039007 - X_2039002_2039007_- 0.954148877 0.957384706 0.955766792 0.002288056 usp FBtr0070346|FBtr0333803 2038796|2038796 2039386|2039386 X - 2038981 2039033 5'utr usp FlyBase G64186.1 TAACGGTTAAAATTAATGCATAGTTATGATCTACAGACGTATGTAAACATACA 85 2039007 0.722550715 5 80 571 0.923809524 1.986771734 0.19047619 0.188235294 0.342857143 85 8 0 97 X:2038981-2039033 6 usp FBtr0070346|FBtr0333803 2038796|2038796 2039386|2039386 TGATCT 6mer3-8 dme-bantam-3p X - 2038982 2039029 5'utr usp FlyBase G48383.1 GGTTAAAATTAATGCATAGTTATGATCTACAGACGTATGTAAACATAC 44 2039007 0.707469333 4 42 273 0.971428571 1.832508913 0.357142857 0.340909091 0.585714286 44 2 0 68 X:2038982-2039029 6 63.5 3515 FBgn0003964 1386.533333 66.48333333 101.85 0.045797673 0.955126598 0.623465881 0 0 0 0.2 dme-miR-308-3p 7mer-m1 TGTGATT X 2039331 2039337 - X_2039331_2039337_- 0.506928063 0.454923034 0.480925549 0.036773159 usp FBtr0070346|FBtr0333803 2038796|2038796 2039386|2039386 X - 2039291 2039360 5'utr usp FlyBase G64188.1 TCTCCATCCGAAAAATGTTTCATTGTGATTGCGTTTGTTTGCATTTCTCCTCTCTATCCCTTATACCCTA 295 2039338 0.629756868 17 277 3251 0.938172043 1.542825427 0.206989247 0.210169492 0.373655914 295 14 9 349 X:2039291-2039360 7 usp FBtr0070346|FBtr0333803 2038796|2038796 2039386|2039386 TGTGATT 7mer-m1 dme-miR-308-3p X - 2039295 2039356 5'utr usp FlyBase G48385.1 CATCCGAAAAATGTTTCATTGTGATTGCGTTTGTTTGCATTTCTCCTCTCTATCCCTTATAC 199 2039332 0.691215852 11 191 2120 0.969798658 1.682746592 0.241610738 0.346733668 0.563758389 199 4 5 289 X:2039295-2039356 7 210.5 3516 FBgn0003964 1386.533333 66.48333333 101.85 0.151817482 3.166207069 2.06676485 1 -5 -2 0.2 dme-miR-283-5p 7mer-m1 GATATTT X 20421328 20421334 - X_20421328_20421334_- 0.704937538 0.762832195 0.733884866 0.040937735 Pp4-19C FBtr0346620|FBtr0077324|FBtr0345017|FBtr0340403|FBtr0077325 20421085|20421085|20421085|20421085|20421085 20421864|20421864|20421864|20421864|20421864 X - 20421290 20421359 3'utr Pp4-19C FlyBase G69291.1 ACTAGGAGCCCAAGTTGAGCAAATAGATATTTTTACCGACAGATTGCGTTAAGTCGGCTAAGCTAGGACA 11 20421345 0.97456021 5 10 63 0.916666667 1.041392685 0.25 0.090909091 0.166666667 11 1 0 11 X:20421290-20421359 7 Pp4-19C FBtr0340403|FBtr0345017|FBtr0077324|FBtr0346620|FBtr0077325 20421085|20421085|20421085|20421085|20421085 20421864|20421864|20421864|20421864|20421864 GATATTT 7mer-m1 dme-miR-283-5p X - 20421300 20421362 3'utr Pp4-19C FlyBase G52103.1 TATACTAGGAGCCCAAGTTGAGCAAATAGATATTTTTACCGACAGATTGCGTTAAGTCGGCTA 15 20421345 0.977233831 6 13 88 0.916666667 1.342422681 0.125 0.466666667 0.666666667 15 2 0 22 X:20421300-20421362 7 8 3517 FBgn0023177 682.52 42.84666667 65.32666667 0.011721268 0.186712307 0.122461476 11 11 11 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA X 20426559 20426566 - X_20426559_20426566_- 0.64998377 0.649067921 0.649525846 0.000647639 CG15456 FBtr0077323|FBtr0077323|FBtr0077323 20426507|20426507|20426507 20426645|20426645|20426645 X - 20426541 20426608 3'utr CG15456 FlyBase G69304.1 GCTTCACGCTTACACCAACATTTGTGGAACCCATTTGAAATCCTGTGATATATGGTATATACATATAT 39 20426568 0.815469078 8 34 326 0.88372093 1.102662342 0.186046512 0.102564103 0.186046512 39 3 2 38 X:20426541-20426608 8 CG15456 FBtr0077323|FBtr0077323|FBtr0077323 20426507|20426507|20426507 20426645|20426645|20426645 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 20426531 20426602 3'utr CG15456 FlyBase G52110.1 CGCTTACACCAACATTTGTGGAACCCATTTGAAATCCTGTGATATATGGTATATACATATATAATAATAAAT 24 20426568 0.964384997 10 23 201 1 1.568201724 0.162162162 0.333333333 0.567567568 24 0 0 37 X:20426531-20426602 8 27 3518 FBgn0040650 15.33333333 4.38 6.593333333 1.760869565 6.164383562 4.095045501 2 2 2 0.2 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT X 20470493 20470499 - X_20470493_20470499_- 0.500230185 0.588452202 0.544341194 0.062382374 RhoGAP19D FBtr0304906|FBtr0301537|FBtr0340405|FBtr0345015 20469953|20469953|20469953|20469953 20472033|20472033|20472033|20472033 X - 20470483 20470510 3'utr RhoGAP19D FlyBase G69309.1 TATTTGGAGAATGGTGCTGGCGGAAATG 13 20470499 0.818407676 3 12 53 1 1.176091259 0.066666667 0.153846154 0.266666667 13 0 0 15 X:20470483-20470510 7 RhoGAP19D FBtr0345015|FBtr0340405|FBtr0301537|FBtr0304906 20469953|20469953|20469953|20469953 20472033|20472033|20472033|20472033 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" X - 20470456 20470518 3'utr RhoGAP19D FlyBase G52113.1 GTATTATTTATTTGGAGAATGGTGCTGGCGGAAATGCATGATATAGGTGCAGCTACAAAGCTA 9 20470499 0.962620947 5 9 50 1 1.113943352 0.153846154 0.333333333 0.538461538 9 0 0 13 X:20470456-20470518 7 9.5 3519 FBgn0031118 1322.826667 17.35333333 26.62 0.007181591 0.547445255 0.35687453 0 0 0 0.2 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG X 20470644 20470650 - X_20470644_20470650_- 0.621423212 0.62839178 0.624907496 0.004927544 RhoGAP19D FBtr0304906|FBtr0301537|FBtr0340405|FBtr0345015 20469953|20469953|20469953|20469953 20472033|20472033|20472033|20472033 X - 20470633 20470673 3'utr RhoGAP19D FlyBase G69311.1 TTTCTTTTCTTCTTTGTACCTCTGTACCTGTTGTACAAAAA 31 20470651 0.802699252 4 31 287 1 1.62324929 0.285714286 0.193548387 0.404761905 31 0 0 42 X:20470633-20470673 7 RhoGAP19D FBtr0345015|FBtr0340405|FBtr0301537|FBtr0304906 20469953|20469953|20469953|20469953 20472033|20472033|20472033|20472033 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" X - 20470635 20470662 3'utr RhoGAP19D FlyBase G52114.1 CTTTGTACCTCTGTACCTGTTGTACAAA 18 20470651 0.786797628 2 18 142 1 1.342422681 0.227272727 0.222222222 0.363636364 18 0 0 22 X:20470635-20470662 7 24.5 3520 FBgn0031118 1322.826667 17.35333333 26.62 0.018520945 1.411832501 0.920360631 1 1 1 0.2 dme-miR-11-3p 7mer-m1 TGTGATG X 20514947 20514953 + X_20514947_20514953_+ 0.605699245 0.604910743 0.605304994 0.000557554 CG1812 FBtr0077312 20514813 20515828 X + 20514910 20514975 3'utr CG1812 FlyBase G63274.1 TGTGTAGCTAGCGTAGACCTATGTACATGCGAGATTTTGTGATGACTGCAGTAACGAAAATGTGCC 28 20514946 0.981450366 8 26 186 0.945945946 1.243038049 0.297297297 0.214285714 0.405405405 28 1 1 35 X:20514910-20514975 7 CG1812 FBtr0077312 20514813 20515828 TGTGATG 7mer-m1 dme-miR-11-3p X + 20514911 20514965 3'utr CG1812 FlyBase G47706.1 GTGTAGCTAGCGTAGACCTATGTACATGCGAGATTTTGTGATGACTGCAGTAACG 18 20514946 0.980803042 6 18 128 1 1.380211242 0.458333333 0.222222222 0.416666667 18 0 0 24 X:20514911-20514965 7 19.5 3521 FBgn0031119 225 8.363333333 12.75 0.086666667 2.331606218 1.529411765 1 1 1 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA X 20515531 20515538 + X_20515531_20515538_+ 0.483992028 0.479942114 0.481967071 0.002863712 CG1812 FBtr0077312 20514813 20515828 X + 20515506 20515560 3'utr CG1812 FlyBase G63277.1 ATAGAGTGTAAAATATGTAGAACATGTACTTAATTTGTATAAACTAGAAAAAGTT 57 20515530 0.895044842 5 56 521 0.984615385 1.806179974 0.246153846 0.122807018 0.230769231 57 1 0 64 X:20515506-20515560 8 CG1812 FBtr0077312 20514813 20515828 GTACTTAA 8mer-A1 dme-miR-252-5p X + 20515509 20515556 3'utr CG1812 FlyBase G47708.1 GAGTGTAAAATATGTAGAACATGTACTTAATTTGTATAAACTAGAAAA 47 20515530 0.886382602 4 47 406 1 1.84509804 0.157142857 0.382978723 0.585714286 47 0 0 70 X:20515509-20515556 8 51.5 3522 FBgn0031119 225 8.363333333 12.75 0.228888889 6.157831806 4.039215686 1 1 1 0.2 dme-miR-986-5p 6mer2-7 TTCGAG X 20515965 20515970 - X_20515965_20515970_- 0.970884166 0.90939927 0.940141718 0.04347639 Tak1 FBtr0077319|FBtr0340404 20515906|20515906 20516300|20516300 X - 20515922 20515998 3'utr Tak1 FlyBase G69331.1 ACACACTTAGCATTAGCACATGTATCTGTTCGAGGAAGCTGACAAGGAGTAGACCAAAAAAATATAAAAACCATCGA 77 20515978 0.983729794 9 77 590 1 1.963787827 0.043478261 0.181818182 0.315217391 77 0 0 92 X:20515922-20515998 6 Tak1 FBtr0077319|FBtr0340404 20515906|20515906 20516300|20516300 TTCGAG 6mer2-7 dme-miR-986-5p X - 20515928 20516000 3'utr Tak1 FlyBase G52125.1 AAACACACTTAGCATTAGCACATGTATCTGTTCGAGGAAGCTGACAAGGAGTAGACCAAAAAAATATAAAAAC 53 20515978 0.982303798 6 53 396 1 1.892094603 0.076923077 0.377358491 0.576923077 53 0 0 78 X:20515928-20516000 6 61.5 3523 FBgn0026323 737.6966667 30.11333333 45.87333333 0.083367599 2.042284702 1.340648162 8 8 8 0.2 dme-miR-970-3p 6mer3-8 TCTTAT X 20516257 20516262 - X_20516257_20516262_- 0.999870155 0.998693424 0.99928179 0.000832123 Tak1 FBtr0077319|FBtr0340404 20515906|20515906 20516300|20516300 X - 20516244 20516309 stop_codon Tak1 FlyBase G69333.1 AATGCGTAGTCTCGTGCGCTGCCGATTCGATCGATCGACTCTCTATGTCTTATAGGCTAGTACTCT 9 20516260 0.758871517 9 9 72 1 1 0.4 0.111111111 0.2 9 0 0 10 X:20516244-20516309 6 Tak1 FBtr0077319|FBtr0340404 20515906|20515906 20516300|20516300 TCTTAT 6mer3-8 dme-miR-970-3p X - 20516243 20516307 stop_codon Tak1 FlyBase G52127.1 TGCGTAGTCTCGTGCGCTGCCGATTCGATCGATCGACTCTCTATGTCTTATAGGCTAGTACTCTA 11 20516290 0.810567704 6 10 83 0.875 1.322219295 0.333333333 0.727272727 0.875 11 3 0 21 X:20516243-20516307 6 5 3524 FBgn0026323 737.6966667 30.11333333 45.87333333 0.006777854 0.166039407 0.108995785 -2 28 13 0.2 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 2055118 2055125 + X_2055118_2055125_+ 0.630885294 0.630733731 0.630809512 0.000107197 CG4313 FBtr0340109|FBtr0340108|FBtr0340107 2054944|2054944|2054944 2055414|2055414|2055414 X + 2055099 2055148 3'utr CG4313 FlyBase G58179.1 AGTGCCTCCAAAAAAGATTTCTAGTCACATGATCCGGCCGGTCGTCCCTT 14 2055117 0.976627208 4 13 87 0.882352941 1.176091259 0.235294118 0.142857143 0.294117647 14 2 0 15 X:2055099-2055148 8 CG4313 FBtr0340107|FBtr0340109|FBtr0340108 2054944|2054944|2054944 2055414|2055414|2055414 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X + 2055097 2055132 3'utr CG4313 FlyBase G44006.1 ATAGTGCCTCCAAAAAAGATTTCTAGTCACATGATC 8 2055117 0.978349085 2 6 35 0.777777778 0.84509804 0.222222222 0.125 0.222222222 8 2 0 7 X:2055097-2055132 8 9.5 3525 FBgn0025632 50.11333333 3.046666667 4.636666667 0.189570307 3.118161926 2.048885694 1 1 1 0.2 dme-miR-184-3p 6mer3-8 TCCGTC X 21038831 21038836 + X_21038831_21038836_+ 0.629101581 0.584480087 0.606790834 0.031552165 Ntf-2 FBtr0113007 21037719 21039543 X + 21038792 21038918 stop_codon Ntf-2 FlyBase G63291.1 AGGCCAACGCAGGCACCTTCTTTGTGGCCCACGACATCTTCCGTCTCAACATCCACAACTCTGCCTAGGAGCACTCCACTTACCTACGTATGCACACCACTCAGCACCACACATAATCGACATCCAA 191 21038830 0.9685458 13 184 1017 0.960352423 1.736396502 0.035242291 0.162303665 0.295154185 191 6 3 218 X:21038792-21038918 6 Ntf-2 FBtr0113007 21037719 21039543 TCCGTC 6mer3-8 dme-miR-184-3p X + 21038811 21038964 stop_codon Ntf-2 FlyBase G47722.1 CTTTGTGGCCCACGACATCTTCCGTCTCAACATCCACAACTCTGCCTAGGAGCACTCCACTTACCTACGTATGCACACCACTCAGCACCACACATAATCGACATCCAAAGATGCCCAGCGCCAGATGATAACAACAAGCTCGGCAGTGGAACTC 110 21038830 0.864498965 14 107 519 0.962566845 1.77815125 0.096256684 0.445454545 0.673796791 110 5 2 180 X:21038811-21038964 6 123.5 3526 FBgn0031145 2698.153333 430.73 661.49 0.045772047 0.286722541 0.186699723 1 1 1 0.2 dme-miR-1006-3p 7mer-m8 CGAATTT X 21039229 21039235 + X_21039229_21039235_+ 0.430660359 0.539999852 0.485330105 0.077314702 Ntf-2 FBtr0333760|FBtr0113007|FBtr0333762 21038858|21037719|21038858 21039543|21039543|21041467 X + 21039221 21039276 3'utr Ntf-2 FlyBase G63295.1 AGGACTATCGAATTTGGTGGTATGTGCCGTGCTACAAGCTCGTATTTCGAATTCCC 9 21039235 0.92334403 7 9 60 1 1.079181246 0.5 0.333333333 0.5 9 0 0 12 X:21039221-21039276 7 Ntf-2 FBtr0333762|FBtr0113007|FBtr0333760 21038858|21037719|21038858 21041467|21039543|21039543 CGAATTT 7mer-m8 dme-miR-1006-3p X + 21039197 21039251 3'utr Ntf-2 FlyBase G47725.1 TGGATCTCGCGATCTAATTTAGCTAGGACTATCGAATTTGGTGGTATGTGCCGTG 13 21039229 0.976713341 6 12 100 0.941176471 1.204119983 0.705882353 0.230769231 0.411764706 13 1 0 16 X:21039197-21039251 7 7.5 3527 FBgn0031145 2698.153333 430.73 661.49 0.002779679 0.0174123 0.01133804 -6 0 -3 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC X 21050232 21050238 - X_21050232_21050238_- 0.661614354 0.661615492 0.661614923 7.78E-07 CG1518 FBtr0345923|FBtr0077264 21049883|21049962 21050270|21050270 X - 21050109 21050316 stop_codon CG1518 FlyBase G69358.1 GGTGCGCATCTACAAGGTTAAGGATCTGCCGAATCGTGGAGTCTGAGAAATAAGTGTCGCAGTCATTCCGCTCTATTCTGTGTTCTGTACATTAGCTAACTCTGCCCGTCTCCCTCTATCTCGAATATTTGGCAATCTCTCTCGCTCTATGAGCACCAATTGCTGCATTCTCCTGCTTTGCCCATCATGCATTTAGTTCTACACTGGC 211 21050240 0.896288387 34 202 1959 0.957198444 2.390935107 0.13618677 0.184834123 0.3307393 211 11 0 246 X:21050109-21050316 7 CG1518 FBtr0345923|FBtr0077264 21049883|21049962 21050270|21050270 TGTGTTC 7mer-m8 dme-miR-317-3p X - 21050081 21050382 stop_codon CG1518 FlyBase G52149.1 CGAGATCGGCAACAAGGACTTTGAACTGGATGTCATGGAGGAGGCGTACACCACGGAGCACTGGCTGGTGCGCATCTACAAGGTTAAGGATCTGCCGAATCGTGGAGTCTGAGAAATAAGTGTCGCAGTCATTCCGCTCTATTCTGTGTTCTGTACATTAGCTAACTCTGCCCGTCTCCCTCTATCTCGAATATTTGGCAATCTCTCTCGCTCTATGAGCACCAATTGCTGCATTCTCCTGCTTTGCCCATCATGCATTTAGTTCTACACTGGCACAAAACCACAAAAACCAAGTATTTTTT 155 21050240 0.987604808 37 145 1296 0.94092827 1.503206823 0.126582278 0.35483871 0.578059072 155 8 6 223 X:21050081-21050382 7 92.5 3528 FBgn0031149 1278.48 56.59333333 86.55 0.072351542 1.634468135 1.068746389 2 2 2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA X 21062678 21062685 - X_21062678_21062685_- 0.649939607 0.64996268 0.649951143 1.63E-05 CG32512 FBtr0077262|FBtr0077262|FBtr0077262|FBtr0340438|FBtr0340438|FBtr0340438|FBtr0332848|FBtr0332848|FBtr0332848|FBtr0332847|FBtr0332847|FBtr0332847 21062382|21062382|21062382|21062275|21062275|21062275|21062382|21062382|21062382|21062420|21062420|21062420 21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966 X - 21062595 21063085 stop_codon CG32512 FlyBase G69375.1 AGCGCATCCACAAGGGATTCCGGCGCATTCACATGACCATCGCCATTGGCAATATGACGGTCATGCTGACCACCTGCCTGCAGCTGTATTTTCTGGCATCGAAAATACGCCTTAGCTAAGGCAAGCCCGAAGTGAAGAATTTATAGATTTAGGTATCCACCACATAACAACGCATACACACACACACACATTACTACTACTGTACGTTCCACGTTCGATAAATGTCTCAAATTCAAATATGGCTTATTGAACACTTGAGTTTTTGAACTGGTCCTCCATCCGGCCCCAAATGCCCTTCCTCCGCCCCACACACGCCCACACCACCCATACGCCCATGCACGAAAATATTTAATTTCTCCCAAGGACGCCTTGTTTGCGACGACCTTTCCAATCTGATTTCCTGTGATAAACTCAGCCCAAAACTCCCAAAACAAAACACCCACCCGCAAACCACAGCACATTTAGCCTAGAGTTGATAGCCAATAATTTAC 887 21062688 0.984465956 77 817 6566 0.924783028 1.867875255 0.107039537 0.145434047 0.269045323 887 66 12 959 X:21062595-21063085 8 CG32512 FBtr0332847|FBtr0332847|FBtr0332847|FBtr0332848|FBtr0332848|FBtr0332848|FBtr0340438|FBtr0340438|FBtr0340438|FBtr0077262|FBtr0077262|FBtr0077262 21062420|21062420|21062420|21062382|21062382|21062382|21062275|21062275|21062275|21062382|21062382|21062382 21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 21062645 21062732 3'utr CG32512 FlyBase G52166.1 TTCTCCCAAGGACGCCTTGTTTGCGACGACCTTTCCAATCTGATTTCCTGTGATAAACTCAGCCCAAAACTCCCAAAACAAAACACCC 443 21062688 0.986273785 17 403 3534 0.907378336 2.062957834 0.09733124 0.340857788 0.541601256 443 55 4 578 X:21062645-21062732 8 529 3529 FBgn0052512 150.89 8.04 12.13666667 3.5058652 65.7960199 43.58692667 3 3 3 0.2 dme-miR-184-3p 7mer-m8 TCCGTCC X 21077165 21077171 + X_21077165_21077171_+ 0.607701091 0.64915342 0.628427256 0.029311202 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 X + 21077097 21077221 stop_codon bves FlyBase G63325.1 GTGCAATCTGAATTTATGCAACCGCCCGCTGCTGCTCAACTTGCCACGAACAGAAATCAGAGCACCCATCCGTCCCTTCACCTTTGACCTGCACAAGAACTACCAGAAAAACAACCCCACCCACA 115 21077173 0.966688129 15 105 567 0.90647482 1.498310554 0.086330935 0.173913043 0.316546763 115 10 3 126 X:21077097-21077221 7 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 TCCGTCC 7mer-m8 dme-miR-184-3p X + 21077095 21077200 stop_codon bves FlyBase G47750.1 AAGTGCAATCTGAATTTATGCAACCGCCCGCTGCTGCTCAACTTGCCACGAACAGAAATCAGAGCACCCATCCGTCCCTTCACCTTTGACCTGCACAAGAACTACC 91 21077173 0.969378518 16 82 456 0.905797101 1.795880017 0.057971014 0.417582418 0.615942029 91 12 1 125 X:21077095-21077200 7 86 3530 FBgn0031150 459.0933333 15.14333333 23.32333333 0.187325743 5.679066696 3.687294555 -8 -8 -8 0.2 dme-bantam-3p 7mer-A1 GATCTCA X 21078423 21078429 + X_21078423_21078429_+ 0.823204995 0.735147263 0.779176129 0.062266197 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 X + 21078359 21078459 3'utr bves FlyBase G63328.1 AAGTATAATGACTAGCATTGAAACTGGTTTGATTACAGCTCTTCAGCTTCAATTACCGATTCTAGATCTCAAGATCGATCAGTCTAGTGACAGGTGATAGG 14 21078419 0.981095638 11 14 97 1 1.146128036 0.428571429 0 0 14 0 0 14 X:21078359-21078459 7 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 GATCTCA 7mer-A1 dme-bantam-3p X + 21078409 21078459 3'utr bves FlyBase G47753.1 AATTACCGATTCTAGATCTCAAGATCGATCAGTCTAGTGACAGGTGATAGG 8 21078419 0.885381313 5 7 50 0.857142857 1.079181246 0.285714286 0.75 0.857142857 8 2 0 12 X:21078409-21078459 7 6.5 3531 FBgn0031150 459.0933333 15.14333333 23.32333333 0.014158341 0.429231785 0.278690868 4 4 4 0.2 dme-miR-277-3p 7mer-A1 GCATTTA X 21078535 21078541 + X_21078535_21078541_+ 0.81742147 0.823321529 0.820371499 0.00417193 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 X + 21078525 21078594 3'utr bves FlyBase G63329.1 TTACCGCTTGGCATTTACTGGAAATTTACTGTGCTGGCACATCAATCAAGTCTCTAAATCTTCCATTAAC 12 21078533 0.856169551 8 12 76 1 1.204119983 0.25 0.333333333 0.5 12 0 0 16 X:21078525-21078594 7 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 GCATTTA 7mer-A1 dme-miR-277-3p X + 21078516 21078586 3'utr bves FlyBase G47754.1 TCTTATTTCTTACCGCTTGGCATTTACTGGAAATTTACTGTGCTGGCACATCAATCAAGTCTCTAAATCTT 10 21078533 0.989496815 3 8 91 0.9375 1.176091259 0.4375 0.4 0.625 10 1 0 15 X:21078516-21078586 7 6.5 3532 FBgn0031150 459.0933333 15.14333333 23.32333333 0.014158341 0.429231785 0.278690868 2 2 2 0.2 dme-miR-1007-3p 7mer-m8 TGAGCTT X 21078669 21078675 + X_21078669_21078675_+ 0.529530942 0.556062492 0.542796717 0.018760674 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 X + 21078646 21078704 3'utr bves FlyBase G63330.1 CGTTGATTGATTTGCATACAAATTGAGCTTGAAGAAAGCGTGAAAACTAATTAGAATTA 12 21078669 0.790891532 5 12 66 1 1.176091259 0.2 0.166666667 0.333333333 12 0 0 15 X:21078646-21078704 7 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 TGAGCTT 7mer-m8 dme-miR-1007-3p X + 21078638 21078750 3'utr bves FlyBase G47755.1 CGTTGATTCGTTGATTGATTTGCATACAAATTGAGCTTGAAGAAAGCGTGAAAACTAATTAGAATTAATATCGAATAATATTTGATAATGTTAAGCAATACATAGCCTAAGTT 20 21078669 0.98045255 10 18 116 0.956521739 1.342422681 0.173913043 0.15 0.260869565 20 1 0 22 X:21078638-21078750 7 10.5 3533 FBgn0031150 459.0933333 15.14333333 23.32333333 0.022871166 0.693374422 0.45019294 0 0 0 0.2 dme-miR-8-3p 7mer-A1 AGTATTA X 21080882 21080888 + X_21080882_21080888_+ 0.690028775 0.686677699 0.688353237 0.002369586 bves FBtr0332845|FBtr0332846 21080843|21080843 21082391|21082391 X + 21080845 21080922 3'utr bves FlyBase G63333.1 AAGGGATCCAGATGAAATGTTTAGACTTGTGTTTTTGAGTATTATTAGATGTATATTTTAGGCAATACTGAGGAACGA 205 21080865 0.844099422 19 191 2042 0.926640927 2.380211242 0.135135135 0.224390244 0.386100386 205 19 0 240 X:21080845-21080922 7 bves FBtr0332845|FBtr0332846 21080843|21080843 21082391|21082391 AGTATTA 7mer-A1 dme-miR-8-3p X + 21080846 21080914 3'utr bves FlyBase G47759.1 AGGGATCCAGATGAAATGTTTAGACTTGTGTTTTTGAGTATTATTAGATGTATATTTTAGGCAATACTG 167 21080865 0.766667626 19 154 1663 0.908333333 2.338456494 0.133333333 0.353293413 0.55 167 22 0 218 X:21080846-21080914 7 52.5 3534 FBgn0031150 459.0933333 15.14333333 23.32333333 0.114355832 3.466872111 2.250964699 17 17 17 0.2 dme-miR-305-3p 7mer-m8 ATGTGCC X 21081854 21081860 + X_21081854_21081860_+ 0.540074423 0.539118605 0.539596514 0.000675853 bves FBtr0332845|FBtr0332846 21080843|21080843 21082391|21082391 X + 21081822 21081872 3'utr bves FlyBase G63339.1 GACCTTTGATAGTCCTTGTTGCTTTTGTATCTATGTGCCTGAATTCATGCA 18 21081855 0.988981958 2 18 174 1 1.342422681 0 0.166666667 0.318181818 18 0 0 22 X:21081822-21081872 7 bves FBtr0332845|FBtr0332846 21080843|21080843 21082391|21082391 ATGTGCC 7mer-m8 dme-miR-305-3p X + 21081814 21081878 3'utr bves FlyBase G47763.1 TACCCATAGACCTTTGATAGTCCTTGTTGCTTTTGTATCTATGTGCCTGAATTCATGCATGTGCA 14 21081855 0.989525683 2 13 133 0.925925926 0.920818754 0.148148148 0.642857143 0.814814815 14 0 2 25 X:21081814-21081878 7 14.5 3535 FBgn0031150 459.0933333 15.14333333 23.32333333 0.031583992 0.957517059 0.621695012 -1 -1 -1 0.2 dme-miR-986-5p 7mer-m8 ATTCGAG X 2112760 2112766 + X_2112760_2112766_+ 0.326940169 0.324557875 0.325749022 0.00168454 csw FBtr0070379|FBtr0070380|FBtr0070378|FBtr0333260 2111732|2111800|2111800|2111800 2115701|2113664|2113664|2115701 X + 2112618 2112784 3'utr csw FlyBase G58239.1 TGAAACGGAAACGGGTTACCGGTTGGAGTGCAAATAAAGTTTTTAGTGTAGTAAGTGTTGACAAAATCGATAGAGAAGAAATTAGAGGAGTAACTGAGGCAGTAAGCACGTAACGATAATGATACAAAAAGCGTTGATTGTGATTCGAGTGACAGCGAGAACAGAAA 396 2112755 0.967813999 24 374 2421 0.945295405 1.594091062 0.396061269 0.131313131 0.24726477 396 15 10 432 X:2112618-2112784 7 csw FBtr0070378|FBtr0333260|FBtr0070379|FBtr0070380 2111800|2111800|2111732|2111800 2113664|2115701|2115701|2113664 ATTCGAG 7mer-m8 dme-miR-986-5p X + 2112618 2112784 3'utr csw FlyBase G44057.1 TGAAACGGAAACGGGTTACCGGTTGGAGTGCAAATAAAGTTTTTAGTGTAGTAAGTGTTGACAAAATCGATAGAGAAGAAATTAGAGGAGTAACTGAGGCAGTAAGCACGTAACGATAATGATACAAAAAGCGTTGATTGTGATTCGAGTGACAGCGAGAACAGAAA 275 2112755 0.974734241 22 250 1696 0.902147971 1.347042878 0.436754177 0.367272727 0.584725537 275 25 16 378 X:2112618-2112784 7 214 3536 FBgn0000382 593.5233333 15.53 24.04 0.360558697 13.77978107 8.901830283 5 5 5 0.2 dme-miR-317-3p 6mer3-8 TGTGTT X 2113125 2113130 + X_2113125_2113130_+ 0.918748983 0.791196463 0.854972723 0.090193238 csw FBtr0070379|FBtr0070380|FBtr0070378|FBtr0333260 2111732|2111800|2111800|2111800 2115701|2113664|2113664|2115701 X + 2112984 2113154 3'utr csw FlyBase G58242.1 ACAGATCCAGATTCAGATCCAGATCTATATCTCTAGCAGCCAATTTCTGATTTCCCCTTCCCTCTTAGTTTTCCCATTAATTTAGTGATTGTGTGTATATTTTTAATTGTATATTGAAGATTATTTATAGCGATTGTCCATTGTGTTACATTTCAAATGTTCGAAAGAATT 49 2113124 0.990338257 16 45 456 0.93220339 1.263241435 0.06779661 0.163265306 0.305084746 49 2 2 55 X:2112984-2113154 6 csw FBtr0070378|FBtr0333260|FBtr0070379|FBtr0070380 2111800|2111800|2111732|2111800 2113664|2115701|2115701|2113664 TGTGTT 6mer3-8 dme-miR-317-3p X + 2113090 2113164 3'utr csw FlyBase G44062.1 TTGTATATTGAAGATTATTTATAGCGATTGTCCATTGTGTTACATTTCAAATGTTCGAAAGAATTGTATTTAGAA 28 2113124 0.990204993 9 24 256 0.923076923 1.079181246 0.076923077 0.285714286 0.487179487 28 1 2 36 X:2113090-2113164 6 21 3537 FBgn0000382 593.5233333 15.53 24.04 0.035381928 1.352221507 0.873544093 1 1 1 0.2 dme-miR-92b-3p 6mer3-8 GTGCAA X 2113463 2113468 + X_2113463_2113468_+ 0.978125811 0.999999541 0.989062676 0.015467042 csw FBtr0070379|FBtr0070380|FBtr0070378|FBtr0333260 2111732|2111800|2111800|2111800 2115701|2113664|2113664|2115701 X + 2113432 2113473 3'utr csw FlyBase G58244.1 TAGCAGCGAAATGTAAATCAATTAGATTATTGTGCAAATTTG 5 2113461 0.9865841 3 5 42 1 0.698970004 0.4 0 0 5 0 0 5 X:2113432-2113473 6 csw FBtr0070378|FBtr0333260|FBtr0070379|FBtr0070380 2111800|2111800|2111732|2111800 2113664|2115701|2115701|2113664 GTGCAA 6mer3-8 dme-miR-92b-3p X + 2113433 2113502 3'utr csw FlyBase G44065.1 AGCAGCGAAATGTAAATCAATTAGATTATTGTGCAAATTTGAGTAATATATTTAAAACATACCCTTATTT 7 2113461 0.986680895 6 7 56 1 1.079181246 0.083333333 0.285714286 0.583333333 7 0 0 12 X:2113433-2113502 6 3.5 3538 FBgn0000382 593.5233333 15.53 24.04 0.005896988 0.225370251 0.145590682 2 2 2 0.2 dme-bantam-3p 6mer3-8 TGATCT X 2113554 2113559 + X_2113554_2113559_+ 0.634944927 0.628912338 0.631928632 0.004265692 csw FBtr0070379|FBtr0070380|FBtr0070378|FBtr0333260 2111732|2111800|2111800|2111800 2115701|2113664|2113664|2115701 X + 2113521 2113579 3'utr csw FlyBase G58245.1 GCTTTTGTAAGTGCTTTAAATTGTTATTCATCTTGATCTTGCAAAAAAATGAAAAAACC 200 2113553 0.756151155 9 190 1839 0.957692308 1.618048097 0.05 0.24 0.415384615 200 6 5 249 X:2113521-2113579 6 csw FBtr0070378|FBtr0333260|FBtr0070379|FBtr0070380 2111800|2111800|2111732|2111800 2113664|2115701|2115701|2113664 TGATCT 6mer3-8 dme-bantam-3p X + 2113531 2113574 3'utr csw FlyBase G44066.1 GTGCTTTAAATTGTTATTCATCTTGATCTTGCAAAAAAATGAAA 160 2113553 0.75117583 6 154 1474 0.968325792 1.631443769 0.013574661 0.2875 0.484162896 160 3 4 214 X:2113531-2113574 6 177.5 3539 FBgn0000382 593.5233333 15.53 24.04 0.299061536 11.42949131 7.383527454 1 1 1 0.2 dme-miR-34-5p 7mer-A1 ACTGCCA X 2116135 2116141 - X_2116135_2116141_- 0.820542521 0.820803128 0.820672825 0.000184272 ph-d FBtr0070433|FBtr0112843 2115725|2115725 2116865|2116865 X - 2116076 2116202 3'utr ph-d FlyBase G64261.1 TAGCAAGAGGGGTAATATCGTAGCTCAAATGACAGGACGCCACATGTATGATAGAGCATAGACTGCCATCCCAGTCATCAATTCATCACTTTGTATAGAAGTTCACAATTACTCATAATCACTAACG 1317 2116144 0.919919228 17 1284 5161 0.973951715 2.583482164 0.195679797 0.1579347 0.295425667 1317 38 3 1533 X:2116076-2116202 7 ph-d FBtr0070433|FBtr0112843 2115725|2115725 2116865|2116865 ACTGCCA 7mer-A1 dme-miR-34-5p X - 2116120 2116337 3'utr ph-d FlyBase G48452.2 TGACCATGCTGATCTCCCACGACCTTTGCATGGACCTTTGCCTACCTGTGGACCGGGTCCAACCGGGTCTGCCACCCAAGCTGAATTTGATTCACTTGAAGCGGACTTTCAATCCTTTTGTACGTAATCTAAACATAGCAAGAGGGGTAATATCGTAGCTCAAATGACAGGACGCCACATGTATGATAGAGCATAGACTGCCATCCCAGTCATCAATT 834 2116144 0.9406239 25 814 3229 0.978613569 2.423900919 0.205752212 0.42206235 0.644542773 834 25 4 1327 X:2116120-2116337 7 653 3540 FBgn0004860 503.0533333 10.12666667 15.45333333 1.2980731 64.48321264 42.25625539 3 3 3 0.2 dme-miR-1006-3p 7mer-A1 GAATTTA X 21205343 21205349 - X_21205343_21205349_- 0.651254515 0.39677807 0.524016292 0.179941988 CG32521 FBtr0077234|FBtr0331815|FBtr0077235|FBtr0331813|FBtr0310652 21205308|21205308|21205308|21205308|21205308 21205682|21205682|21205682|21205682|21205682 X - 21205340 21205367 3'utr CG32521 FlyBase G69392.1 AGAAAAGTAACTGATATTGAATTTAAAC 5 21205351 0.676871954 4 5 32 1 0.84509804 0.428571429 0.4 0.571428571 5 0 0 7 X:21205340-21205367 7 CG32521 FBtr0331813|FBtr0077235|FBtr0077234|FBtr0331815|FBtr0310652 21205308|21205308|21205308|21205308|21205308 21205682|21205682|21205682|21205682|21205682 GAATTTA 7mer-A1 dme-miR-1006-3p X - 21205340 21205371 3'utr CG32521 FlyBase G52181.1 AAATAGAAAAGTAACTGATATTGAATTTAAAC 5 21205351 0.890154572 3 4 25 1 0.84509804 0 0.4 0.571428571 5 0 0 7 X:21205340-21205371 7 4.5 3541 FBgn0052521 337.9966667 23.82333333 36.18 0.013313741 0.188890444 0.124378109 2 2 2 0.2 dme-miR-1012-3p 6mer3-8 TTGACT X 2126635 2126640 - X_2126635_2126640_- 0.836855078 0.906349624 0.871602351 0.049140032 ph-p FBtr0301515|FBtr0343589|FBtr0070432|FBtr0345598 2126208|2126208|2126208|2126208 2126808|2126808|2126808|2126808 X - 2126626 2126655 3'utr ph-p FlyBase G64274.1 CAGGTCTTAAACCCATTGACTTTGTACATA 10 2126640 0.750495144 2 10 79 1 1.113943352 0 0.2 0.384615385 10 0 0 13 X:2126626-2126655 6 ph-p FBtr0301515|FBtr0343589|FBtr0070432|FBtr0345598 2126208|2126208|2126208|2126208 2126808|2126808|2126808|2126808 TTGACT 6mer3-8 dme-miR-1012-3p X - 2126621 2126663 3'utr ph-p FlyBase G48460.1 CAGGCCATCAGGTCTTAAACCCATTGACTTTGTACATACTCCC 14 2126639 0.813840302 6 14 105 1 1.361727836 0.217391304 0.5 0.695652174 14 0 0 23 X:2126621-2126663 6 11.5 3542 FBgn0004861 584.37 11.91 18.33 0.019679313 0.965575147 0.627386798 0 -1 -0.5 0.2 dme-bantam-3p 7mer-m8 TGATCTC X 2126772 2126778 - X_2126772_2126778_- 0.652083903 0.661070623 0.656577263 0.006354557 ph-p FBtr0301515|FBtr0343589|FBtr0070432|FBtr0345598 2126208|2126208|2126208|2126208 2126808|2126808|2126808|2126808 X - 2126748 2126817 stop_codon ph-p FlyBase G64275.2 GCGCAGTAGGGCAGCTAGAGCACGAAAAGCCGAAAAAGATGATCTCCTAACCGAGCAGTGGACCTGGTTC 187 2126778 0.926166365 4 177 612 0.953051643 1.705436047 0.192488263 0.117647059 0.225352113 187 7 3 203 X:2126748-2126817 7 ph-p FBtr0301515|FBtr0343589|FBtr0070432|FBtr0345598 2126208|2126208|2126208|2126208 2126808|2126808|2126808|2126808 TGATCTC 7mer-m8 dme-bantam-3p X - 2126700 2126821 stop_codon ph-p FlyBase G48461.1 AGGAGCGCAGTAGGGCAGCTAGAGCACGAAAAGCCGAAAAAGATGATCTCCTAACCGAGCAGTGGACCTGGTTCAACCAAGTCTGTCGTGCCAGGTGATTCTGATTCAATCGGGCAGGCGAA 134 2126778 0.877258461 11 130 472 0.972826087 1.65079304 0.135869565 0.298507463 0.489130435 134 2 3 179 X:2126700-2126821 7 151.5 3543 FBgn0004861 584.37 11.91 18.33 0.259253555 12.72040302 8.265139116 0 0 0 0.2 dme-miR-252-5p 8mer-m1 GTACTTAG X 21292425 21292432 - X_21292425_21292432_- 0.614529614 0.597592437 0.606061025 0.011976409 CG1718 FBtr0306679 21292306 21293337 X - 21292396 21292448 3'utr CG1718 FlyBase G69406.1 GTGTATTTATTTCGATGTACTTAGACCGGCTTACCAAAGCGTGTAAATAAGTC 33 21292433 0.753608723 4 33 234 1 1.556302501 0.083333333 0.090909091 0.166666667 33 0 0 36 X:21292396-21292448 8 CG1718 FBtr0306679 21292306 21293337 GTACTTAG 8mer-m1 dme-miR-252-5p X - 21292404 21292449 3'utr CG1718 FlyBase G52188.1 TGTGTATTTATTTCGATGTACTTAGACCGGCTTACCAAAGCGTGTA 32 21292433 0.738927434 4 31 223 0.97826087 1.653212514 0.043478261 0.3125 0.52173913 32 1 0 45 X:21292404-21292449 8 32 3544 FBgn0031170 761.1566667 13.58333333 20.66333333 0.042041279 2.355828221 1.548636877 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 21292709 21292714 - X_21292709_21292714_- 0.995874339 0.998871175 0.997372757 0.002119128 CG1718 FBtr0306679|FBtr0306679|FBtr0306679 21292306|21292306|21292306 21293337|21293337|21293337 X - 21292660 21292935 stop_codon CG1718 FlyBase G69408.1 TCCAGTCGCCTCTCGGAATTGAGGAAGCTGTGCAAGTGCCTGCTAACTAATGAGTTTTGAACCAACTACCTGAGCGGGTCCGTTACGATCCGATTTTCACCTGATCTTACACTCACAGATAATAATGTTGTATACCAAAGCAACGCCGATGCCTGAACAGCTAACAAATAGTTTCTAAGCTCGACCTGACAATAGATAGCAGCTATTATGCCTTATTTCATTGTGATCATCTAGCGAAATTTGCACCAAACGACGAGAGATCTTTAATTTTTATGT 238 21292715 0.984718201 43 227 1827 0.95532646 1.489802286 0.18556701 0.18907563 0.336769759 238 5 8 278 X:21292660-21292935 6 CG1718 FBtr0306679|FBtr0306679|FBtr0306679 21292306|21292306|21292306 21293337|21293337|21293337 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 21292659 21292897 stop_codon CG1718 FlyBase G52191.1 CCTGCTAACTAATGAGTTTTGAACCAACTACCTGAGCGGGTCCGTTACGATCCGATTTTCACCTGATCTTACACTCACAGATAATAATGTTGTATACCAAAGCAACGCCGATGCCTGAACAGCTAACAAATAGTTTCTAAGCTCGACCTGACAATAGATAGCAGCTATTATGCCTTATTTCATTGTGATCATCTAGCGAAATTTGCACCAAACGACGAGAGATCTTTAATTTTTATGTA 168 21292715 0.984176359 41 155 1237 0.906015038 1.603865792 0.112781955 0.392857143 0.616541353 168 20 5 241 X:21292659-21292897 6 70 3545 FBgn0031170 761.1566667 13.58333333 20.66333333 0.091965298 5.153374233 3.387643168 1 1 1 0.2 dme-bantam-3p 6mer3-8 TGATCT X 21292829 21292834 - X_21292829_21292834_- 0.717716072 0.80379912 0.760757596 0.060869873 CG1718 FBtr0306679 21292306 21293337 X - 21292660 21292935 stop_codon CG1718 FlyBase G69408.1 TCCAGTCGCCTCTCGGAATTGAGGAAGCTGTGCAAGTGCCTGCTAACTAATGAGTTTTGAACCAACTACCTGAGCGGGTCCGTTACGATCCGATTTTCACCTGATCTTACACTCACAGATAATAATGTTGTATACCAAAGCAACGCCGATGCCTGAACAGCTAACAAATAGTTTCTAAGCTCGACCTGACAATAGATAGCAGCTATTATGCCTTATTTCATTGTGATCATCTAGCGAAATTTGCACCAAACGACGAGAGATCTTTAATTTTTATGT 238 21292834 0.984718201 43 227 1827 0.95532646 1.489802286 0.18556701 0.18907563 0.336769759 238 5 8 278 X:21292660-21292935 6 CG1718 FBtr0332489|FBtr0306679 21292712|21292306 21293337|21293337 TGATCT 6mer3-8 dme-bantam-3p X - 21292659 21292897 stop_codon CG1718 FlyBase G52191.1 CCTGCTAACTAATGAGTTTTGAACCAACTACCTGAGCGGGTCCGTTACGATCCGATTTTCACCTGATCTTACACTCACAGATAATAATGTTGTATACCAAAGCAACGCCGATGCCTGAACAGCTAACAAATAGTTTCTAAGCTCGACCTGACAATAGATAGCAGCTATTATGCCTTATTTCATTGTGATCATCTAGCGAAATTTGCACCAAACGACGAGAGATCTTTAATTTTTATGTA 168 21292834 0.984176359 41 155 1237 0.906015038 1.603865792 0.112781955 0.392857143 0.616541353 168 20 5 241 X:21292659-21292897 6 58.5 3546 FBgn0031170 761.1566667 13.58333333 20.66333333 0.076856714 4.306748466 2.831101791 0 0 0 0.2 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT X 21321214 21321220 - X_21321214_21321220_- 0.338558128 0.372282617 0.355420373 0.023846823 Dd FBtr0339624|FBtr0077226|FBtr0339623 21319789|21319789|21319789 21321321|21321321|21321321 X - 21321190 21321413 stop_codon Dd FlyBase G69428.2 TGTCGCTGCTGCCCATGCTGGATGCGCTGAGGTTCACGAACGACGTGAGATCGGTGCTGTCGAGGAACTTGCACCTGCACCGCCTCTGGTAGCAGGTGGGCCGCCTGTCGCTAGTTTAGTTTATCTATTTAGAAGGAGCACTGAGGGCCAGCGAAGTGGGGAGAATATCTTCTGAAATTAACAACAAACAAGGTGGTGCTGTGACACATTAACGAATTTGTTCA 202 21321219 0.952119205 22 191 893 0.954166667 1.514737442 0.058333333 0.163366337 0.295833333 202 5 6 229 X:21321190-21321413 7 Dd FBtr0077226|FBtr0339623|FBtr0339624 21319789|21319789|21319789 21321321|21321321|21321321 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" X - 21321191 21321259 3'utr Dd FlyBase G52211.2 AGTGGGGAGAATATCTTCTGAAATTAACAACAAACAAGGTGGTGCTGTGACACATTAACGAATTTGTTC 84 21321219 0.844775656 6 79 329 0.96124031 1.792391689 0.015503876 0.428571429 0.627906977 84 4 1 124 X:21321191-21321259 7 122.5 3547 FBgn0029067 2906.393333 121.66 187.2766667 0.042148459 1.006904488 0.654112454 -1 -1 -1 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 21327635 21327641 + X_21327635_21327641_+ 0.511925375 0.515894349 0.513909862 0.002806436 CG1486 FBtr0077190|FBtr0077191 21327402|21327402 21328150|21328150 X + 21327617 21327664 3'utr CG1486 FlyBase G63379.1 ACTTAAACGAAAAGAATTCCAAAGAGGATGATTGTTCGCCCGAAAAGA 24 21327633 0.906556673 3 24 71 1 1.462397998 0.310344828 0.208333333 0.344827586 24 0 0 29 X:21327617-21327664 7 CG1486 FBtr0077190|FBtr0077191 21327402|21327402 21328150|21328150 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X + 21327621 21327658 3'utr CG1486 FlyBase G47785.1 AAACGAAAAGAATTCCAAAGAGGATGATTGTTCGCCCG 21 21327633 0.865720789 3 21 52 1 1.544068044 0.514285714 0.476190476 0.685714286 21 0 0 35 X:21327621-21327658 7 22.5 3548 FBgn0031174 458.93 15.08666667 23.13333333 0.049027085 1.49138312 0.972622478 2 2 2 0.2 dme-bantam-3p 6mer3-8 TGATCT X 21327734 21327739 + X_21327734_21327739_+ 0.999833173 0.999988912 0.999911042 0.000110097 CG1486 FBtr0077190|FBtr0077191 21327402|21327402 21328150|21328150 X + 21327670 21327765 3'utr CG1486 FlyBase G63380.1 AGATGATGATGATATGATCCAATTGAATTGCTTTTATGTATTTATATGTATATGGCTATTTCTATGATCTTTTATATATCTCCATTATATATTATA 72 21327734 0.994667713 8 69 949 0.967032967 1.944482672 0 0.180555556 0.351648352 72 3 0 88 X:21327670-21327765 6 CG1486 FBtr0077190|FBtr0077191 21327402|21327402 21328150|21328150 TGATCT 6mer3-8 dme-bantam-3p X + 21327719 21327750 3'utr CG1486 FlyBase G47786.1 ATATGGCTATTTCTATGATCTTTTATATATCT 31 21327734 0.706210673 5 30 374 0.95 1.579783597 0 0.258064516 0.425 31 2 0 38 X:21327719-21327750 6 50 3549 FBgn0031174 458.93 15.08666667 23.13333333 0.108949077 3.314184711 2.161383285 0 0 0 0.2 dme-miR-965-3p 7mer-m8 TACGCTT X 21327843 21327849 + X_21327843_21327849_+ 0.620144666 0.620189538 0.620167102 3.17E-05 CG1486 FBtr0077190|FBtr0077191 21327402|21327402 21328150|21328150 X + 21327768 21327858 3'utr CG1486 FlyBase G63381.1 ATTTTACCTTATACTTTACTCCCACCATTATTGTTGATTATGATCAGAGGGAAATGTGCGTAACTTCGTCCTCTTTACGCTTTTATTTTTT 22 21327842 0.990855124 8 21 222 0.931034483 0.954242509 0.068965517 0.318181818 0.482758621 22 0 2 27 X:21327768-21327858 7 CG1486 FBtr0077190|FBtr0077191 21327402|21327402 21328150|21328150 TACGCTT 7mer-m8 dme-miR-965-3p X + 21327825 21327859 3'utr CG1486 FlyBase G47788.1 GCGTAACTTCGTCCTCTTTACGCTTTTATTTTTTT 9 21327842 0.824757672 4 9 99 1 1 0 0.111111111 0.2 9 0 0 10 X:21327825-21327859 7 12 3550 FBgn0031174 458.93 15.08666667 23.13333333 0.026147779 0.795404331 0.518731988 1 1 1 0.2 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC X 21344955 21344960 + X_21344955_21344960_+ 0.995816284 0.998649963 0.997233123 0.002003728 fliI FBtr0077192 21344184 21345088 X + 21344907 21345041 3'utr fliI FlyBase G63405.1 ATATATATATATATACATACGCTGAGCTGAGAGGATTACTCCCCTGTGCTAGTCCTTTTAAAATGTTAACCTACTTAAAGCTAGCCTGTAATAAAGTCAAGGAAGCACTAAAACTAATTGTACAAATGCCCACGT 69 21344953 0.962612703 14 64 514 0.912087912 1.618048097 0.021978022 0.217391304 0.406593407 69 7 1 83 X:21344907-21345041 6 fliI FBtr0077192 21344184 21345088 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" X + 21344908 21344975 3'utr fliI FlyBase G47802.1 TATATATATATATACATACGCTGAGCTGAGAGGATTACTCCCCTGTGCTAGTCCTTTTAAAATGTTAA 41 21344953 0.894726351 6 37 323 0.936507937 1.293730757 0.031746032 0.414634146 0.619047619 41 2 2 59 X:21344908-21344975 6 43 3551 FBgn0000709 400.18 10.03 15.43 0.107451647 4.287138584 2.786779002 2 2 2 0.2 dme-miR-968-5p 8mer-A1 ACTACTTA X 21346812 21346819 + X_21346812_21346819_+ 0.575474321 0.530691383 0.553082852 0.031666292 dod FBtr0077193 21346430 21346858 X + 21346760 21346836 3'utr dod FlyBase G63411.1 AAAGGGAATCGCAATTAGGAATTGGAATCTGAGTGAAGCTGTTTACTTTGCGACTACTTATTTATTAGACTAAAGCT 13 21346808 0.991094785 7 11 114 0.857142857 1.079181246 0.142857143 0.076923077 0.142857143 13 2 0 12 X:21346760-21346836 8 dod FBtr0077193 21346430 21346858 ACTACTTA 8mer-A1 dme-miR-968-5p X + 21346755 21346834 3'utr dod FlyBase G47807.1 AAGGGAAAGGGAATCGCAATTAGGAATTGGAATCTGAGTGAAGCTGTTTACTTTGCGACTACTTATTTATTAGACTAAAG 9 21346782 0.984918386 5 9 76 1 1.079181246 0.416666667 0.222222222 0.416666667 9 0 0 12 X:21346755-21346834 8 6.5 3552 FBgn0015379 457.9566667 55.63 84.90666667 0.014193483 0.11684343 0.076554648 4 30 17 0.2 dme-miR-276a-3p 7mer-A1 GTTCCTA X 21354267 21354273 + X_21354267_21354273_+ 0.81177544 0.821104382 0.816439911 0.006596599 sol FBtr0089679 21354101 21357912 X + 21354243 21354291 3'utr sol FlyBase G63418.1 GTAAGATGTGGATATGCATCAAATGTTCCTATGCCTACAACCGACTCTG 25 21354266 0.782480123 3 25 182 1 1.462397998 0.172413793 0.12 0.24137931 25 0 0 29 X:21354243-21354291 7 sol FBtr0089679 21354101 21357912 GTTCCTA 7mer-A1 dme-miR-276a-3p X + 21354247 21354305 3'utr sol FlyBase G47814.1 GATGTGGATATGCATCAAATGTTCCTATGCCTACAACCGACTCTGGCTCCAGACTTGCG 13 21354266 0.760785556 6 13 84 1 1.255272505 0.277777778 0.307692308 0.5 13 0 0 18 X:21354247-21354305 7 17.5 3553 FBgn0003464 838.5366667 18.14666667 27.72333333 0.02086969 0.964364438 0.631237225 1 1 1 0.2 dme-miR-263a-5p 6mer2-7 TGCCAT X 21355764 21355769 + X_21355764_21355769_+ 0.801115101 0.759571313 0.780343207 0.029375903 sol FBtr0089679 21354101 21357912 X + 21355729 21355784 3'utr sol FlyBase G63421.1 CGGCAAGTGGACGACGGTGCTGGTGGATGATCTGCTGCCATGCGACAAGCGTGGCC 13 21355756 0.721381707 3 12 81 0.928571429 1.113943352 0.428571429 0.076923077 0.142857143 13 1 0 13 X:21355729-21355784 6 sol FBtr0089679 21354101 21357912 TGCCAT 6mer2-7 dme-miR-263a-5p X + 21355740 21355773 3'utr sol FlyBase G47817.1 CGACGGTGCTGGTGGATGATCTGCTGCCATGCGA 5 21355757 0.705691392 3 5 32 1 0.698970004 0.2 0 0 5 0 0 5 X:21355740-21355773 6 8.5 3554 FBgn0003464 838.5366667 18.14666667 27.72333333 0.010136706 0.468405584 0.306600938 8 7 7.5 0.2 dme-miR-307a-3p 8mer-A1 GGTTGTGA X 21357059 21357066 + X_21357059_21357066_+ 0.657747798 0.625087689 0.641417744 0.023094178 sol FBtr0089679 21354101 21357912 X + 21357033 21357130 intron-3'utr sol FlyBase G63427.1 TTTCCTTTACAGGGCTGGGCGGGTCTGGTTGTGATGGTGGAAAATAGACATGAGAATAAGTGGATCCATGTGAAATGTGATTGCCAGGAGAGCTACAA 96 21357058 0.956625751 10 91 551 0.947826087 1.736396502 0.460869565 0.166666667 0.304347826 96 5 1 109 X:21357033-21357130 8 sol FBtr0089679 21354101 21357912 GGTTGTGA 8mer-A1 dme-miR-307a-3p X + 21357043 21357140 intron-3'utr sol FlyBase G47823.1 AGGGCTGGGCGGGTCTGGTTGTGATGGTGGAAAATAGACATGAGAATAAGTGGATCCATGTGAAATGTGATTGCCAGGAGAGCTACAATGTGGTGTCG 67 21357058 0.962499778 12 63 370 0.933962264 1.217483944 0.5 0.432835821 0.641509434 67 2 5 99 X:21357043-21357140 8 45.5 3555 FBgn0003464 838.5366667 18.14666667 27.72333333 0.054261193 2.507347539 1.641216785 1 1 1 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 21357546 21357552 + X_21357546_21357552_+ 0.527336337 0.548720043 0.53802819 0.015120559 sol FBtr0089679|FBtr0089678|FBtr0346608|FBtr0301583 21354101|21357433|21357433|21357433 21357912|21357912|21357912|21357912 X + 21357474 21357623 3'utr sol FlyBase G63430.1 TCGATGCTACCCCGCGATATGTCGCTGTTCGAATCCTGATTTGCATGCGTCTCCTCTCAATTCTACCCGTCTTCTAGTCGATGTTCTGTTAACGAATCACACATTACAGCGAAAAACCCAAAGTTGAAACCAATCAGCATGCGAAACAAT 185 21357545 0.986891627 17 178 1548 0.973333333 2.039414119 0.426666667 0.189189189 0.333333333 185 5 1 219 X:21357474-21357623 7 sol FBtr0346608|FBtr0301583|FBtr0089679|FBtr0089678 21357433|21357433|21354101|21357433 21357912|21357912|21357912|21357912 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X + 21357493 21357618 3'utr sol FlyBase G47825.1 TGTCGCTGTTCGAATCCTGATTTGCATGCGTCTCCTCTCAATTCTACCCGTCTTCTAGTCGATGTTCTGTTAACGAATCACACATTACAGCGAAAAACCCAAAGTTGAAACCAATCAGCATGCGAA 124 21357545 0.985303176 14 119 977 0.965517241 1.526339277 0.390804598 0.298387097 0.5 124 2 4 168 X:21357493-21357618 7 132.5 3556 FBgn0003464 838.5366667 18.14666667 27.72333333 0.158013365 7.301616458 4.77936756 1 1 1 0.2 dme-miR-317-3p 6mer3-8 TGTGTT X 21361347 21361352 + X_21361347_21361352_+ 0.997459259 0.999999886 0.998729573 0.001796475 1-Sep FBtr0077198 21360837 21361688 X + 21361184 21361381 3'utr 1-Sep FlyBase G63439.1 CTTCTATCAAGCGAAACCACACACGAAAACAATTGTATTCCTATTATGTATTTAGACGCGATTAACAATGAATTATTATTGTAATACGCATCTAGGCTAAGCGAATCCAATCCGATTTATATTGTATGTTAATTCATTTTTGTCTGTTTACCTTACCCTTATCTGTGTTGTCTCAAAGCGAGCAATTTATTTAGGTTA 115 21361336 0.990917614 28 107 1107 0.9375 1.829303773 0.215277778 0.208695652 0.368055556 115 8 1 135 X:21361184-21361381 6 1-Sep FBtr0077198 21360837 21361688 TGTGTT 6mer3-8 dme-miR-317-3p X + 21361320 21361370 3'utr 1-Sep FlyBase G47833.1 TTTTTGTCTGTTTACCTTACCCTTATCTGTGTTGTCTCAAAGCGAGCAATT 52 21361336 0.835280442 10 46 498 0.894736842 1.355387658 0.157894737 0.365384615 0.565789474 52 6 2 68 X:21361320-21361370 6 51.5 3557 FBgn0011710 1695 101.9 156.09 0.030383481 0.505397448 0.329937856 11 11 11 0.2 dme-miR-14-3p 6mer3-8 AAGACT X 21361626 21361631 + X_21361626_21361631_+ 0.56680984 0.706921631 0.636865736 0.099074004 1-Sep FBtr0077198 21360837 21361688 X + 21361563 21361654 3'utr 1-Sep FlyBase G63442.1 AGTGCACTCCTTTAACGGATGAAACAAAAACCAAAATGTGAAATCTCTTTTATTATGTATATGAAGACTTTTTTAACTCAATATAATCCTCT 122 21361633 0.782023511 16 117 1052 0.960784314 1.866287339 0.039215686 0.229508197 0.385620915 122 5 1 147 X:21361563-21361654 6 1-Sep FBtr0077198 21360837 21361688 AAGACT 6mer3-8 dme-miR-14-3p X + 21361483 21361646 3'utr 1-Sep FlyBase G47835.1 AAACAGTGATCCCTTCCTAGGCGGTCCCGGGAACCCATGGCCAGTTGCGGAAACTCGGTTTAGCAGGCTACTCGCTTAAAAGTGCACTCCTTTAACGGATGAAACAAAAACCAAAATGTGAAATCTCTTTTATTATGTATATGAAGACTTTTTTAACTCAATAT 84 21361633 0.983699791 21 83 681 0.991452991 2.064457989 0.153846154 0.321428571 0.512820513 84 1 0 116 X:21361483-21361646 6 65.5 3558 FBgn0011710 1695 101.9 156.09 0.038643068 0.642787046 0.419629701 -7 -7 -7 0.2 dme-miR-305-3p 6mer2-7 TGTGCC X 21384550 21384555 + X_21384550_21384555_+ 0.887545516 0.867814344 0.87767993 0.013952065 slgA FBtr0307529|FBtr0077204|FBtr0307527|FBtr0077207|FBtr0077210|FBtr0307526|FBtr0077206|FBtr0077205|FBtr0307524|FBtr0307525|FBtr0077208|FBtr0077209 21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904 21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159 X + 21384536 21384562 3'utr slgA FlyBase G63473.1 ATTAACTTCGTGATTGTGCCTGTTCCT 9 21384550 0.708698496 4 8 79 1 0.954242509 0 0 0 9 0 0 9 X:21384536-21384562 6 slgA FBtr0077205|FBtr0307524|FBtr0077208|FBtr0307525|FBtr0077209|FBtr0307529|FBtr0077206|FBtr0077204|FBtr0077210|FBtr0077207|FBtr0307527|FBtr0307526 21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904|21383904 21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159|21385159 TGTGCC 6mer2-7 dme-miR-305-3p X + 21384511 21384573 3'utr slgA FlyBase G47859.1 TATGGCTGCATTTTAGTCTAGATTCATTAACTTCGTGATTGTGCCTGTTCCTCAGTATCAGTT 11 21384551 0.986943706 4 11 100 1 1.278753601 0.210526316 0.363636364 0.631578947 11 0 0 19 X:21384511-21384573 6 9.5 3559 FBgn0003423 397.6533333 14.53333333 22.43333333 0.023890156 0.653669725 0.423476969 0 -1 -0.5 0.2 dme-miR-980-3p 7mer-A1 GCAGCTA X 2150460 2150466 - X_2150460_2150466_- 0.823348165 0.823340751 0.823344458 5.23E-06 wapl FBtr0070430|FBtr0344159|FBtr0070429 2150105|2149934|2150105 2150876|2150876|2150876 X - 2150437 2150477 3'utr wapl FlyBase G64288.1 AAGCAATATTAGCAGCTAAATGTCGGCTTACCCTCGAAAGC 15 2150449 0.696462347 5 13 78 0.761904762 1.204119983 0 0.333333333 0.523809524 15 5 0 16 X:2150437-2150477 7 wapl FBtr0070430|FBtr0344159|FBtr0070429 2150105|2149934|2150105 2150876|2150876|2150876 GCAGCTA 7mer-A1 dme-miR-980-3p X - 2150437 2150488 3'utr wapl FlyBase G48468.1 TATATAGTCATAAGCAATATTAGCAGCTAAATGTCGGCTTACCCTCGAAAGC 9 2150468 0.954417298 4 9 43 1 1.041392685 0.181818182 0.222222222 0.363636364 9 0 0 11 X:2150437-2150488 7 9.5 3560 FBgn0004655 814.8266667 14.46333333 22.20666667 0.011658921 0.656833372 0.42779946 -17 2 -7.5 0.2 dme-miR-995-5p 6mer3-8 AATTCG X 21621652 21621657 - X_21621652_21621657_- 0.983788784 0.723604343 0.853696563 0.183978224 CG32500 FBtr0077374 21621539 21621691 X - 21621615 21621669 3'utr CG32500 FlyBase G69504.1 GCTTACGTTGCTAATTCGCTAGTGAAACCAATAGTTAGTTGTATACATAACGTAC 8 21621656 0.98132456 4 8 58 1 1.041392685 0.090909091 0.375 0.545454545 8 0 0 11 X:21621615-21621669 6 CG32500 FBtr0077374 21621539 21621691 AATTCG 6mer3-8 dme-miR-995-5p X - 21621594 21621663 3'utr CG32500 FlyBase G52273.1 GTTGCTAATTCGCTAGTGAAACCAATAGTTAGTTGTATACATAACGTACATGTAGTTGATTACTTAAATA 6 21621635 0.984965601 5 5 46 0.8 0.903089987 0.1 0.333333333 0.6 6 2 0 8 X:21621594-21621663 6 5 3561 FBgn0052500 0 0 0 Inf Inf Inf -1 -22 -11.5 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT X 2172015 2172021 + X_2172015_2172021_+ 0.589819079 0.527368378 0.558593728 0.044159313 CG3630 FBtr0310076|FBtr0310500|FBtr0070385|FBtr0310501 2171927|2171927|2171927|2171927 2172281|2172281|2172281|2172281 X + 2171989 2172027 3'utr CG3630 FlyBase G58268.1 AAAGGAACTCTCGCAACTACTAAAGCGGCAGCTTTAAAT 7 2171999 0.692169268 3 6 27 0.888888889 0.903089987 0 0.285714286 0.444444444 7 1 0 8 X:2171989-2172027 7 CG3630 FBtr0070385|FBtr0310501|FBtr0310076|FBtr0310500 2171927|2171927|2171927|2171927 2172281|2172281|2172281|2172281 GGCAGCT 7mer-m8 dme-miR-980-3p X + 2171988 2172028 3'utr CG3630 FlyBase G44082.1 AAAAGGAACTCTCGCAACTACTAAAGCGGCAGCTTTAAATT 5 2172022 0.958119426 2 4 28 0.8 0.602059991 0 0 0 5 1 0 4 X:2171988-2172028 7 4.5 3562 FBgn0023540 152.6666667 11.14666667 17.14333333 0.029475983 0.403708134 0.262492709 16 -7 4.5 0.2 dme-miR-14-3p 7mer-A1 AGACTGA X 2237462 2237468 + X_2237462_2237468_+ 0.810699027 0.811629211 0.811164119 0.000657751 pcx FBtr0342766|FBtr0332381|FBtr0344153 2236594|2236594|2236594 2238045|2238045|2237961 X + 2237358 2237517 3'utr pcx FlyBase G58321.1 CTAAGATATTACACACAATTCCTAGATGATTAAGAGGATGAGGATGAGGACGAGGATCAAGTGGAATGACGACATGTAAAGCTCTCACGTTGCCTTAATATATTAGACTGATTTTTTCTACACACATTTGTAGACGTATGGTGGATGACATTTGAGAAGT 305 2237460 0.992172243 30 298 3345 0.977591036 2.241795431 0.019607843 0.144262295 0.268907563 305 7 1 349 X:2237358-2237517 7 pcx FBtr0344153|FBtr0342766|FBtr0332381 2236594|2236594|2236594 2237961|2238045|2238045 AGACTGA 7mer-A1 dme-miR-14-3p X + 2237398 2237514 3'utr pcx FlyBase G44118.1 AGGATGAGGACGAGGATCAAGTGGAATGACGACATGTAAAGCTCTCACGTTGCCTTAATATATTAGACTGATTTTTTCTACACACATTTGTAGACGTATGGTGGATGACATTTGAGA 142 2237460 0.991576035 18 137 1481 0.97235023 2.02325246 0.02764977 0.366197183 0.585253456 142 5 1 211 X:2237398-2237514 7 194.5 3563 FBgn0003048 2230.713333 22.34666667 34.36666667 0.08719184 8.70375895 5.659553831 2 2 2 0.2 dme-miR-1012-3p 6mer3-8 TTGACT X 22447570 22447575 - X_22447570_22447575_- 0.976355273 0.967663766 0.97200952 0.006145819 CG14615 FBtr0339499 22447181 22447925 X - 22447543 22447583 3'utr CG14615 FlyBase G69539.1 ACGCACTTTTGACTGAATCAAATTTGACATTTTCGAGTTAA 7 22447560 0.775937663 3 6 46 0.9 0.954242509 0.1 0.428571429 0.6 7 1 0 9 X:22447543-22447583 6 CG14615 FBtr0339499 22447181 22447925 TTGACT 6mer3-8 dme-miR-1012-3p X - 22447534 22447589 3'utr CG14615 FlyBase G52298.1 TATATTACGCACTTTTGACTGAATCAAATTTGACATTTTCGAGTTAATTAGCTAAA 16 22447576 0.984620951 5 14 115 0.913043478 1.322219295 0.130434783 0.25 0.47826087 16 2 0 21 X:22447534-22447589 6 9.5 3564 FBgn0031184 46.76333333 3.326666667 5.086666667 0.203150617 2.855711423 1.867627785 -15 1 -7 0.2 dme-miR-33-5p 8mer-A1 CAATGCAA X 22447609 22447616 + X_22447609_22447616_+ 0.581684443 0.606504392 0.594094417 0.01755039 CG14621 FBtr0339557 22446988 22447808 X + 22447562 22447635 3'utr CG14621 FlyBase G63513.1 TTTGATTCAGTCAAAAGTGCGTAATATATGTATATATACCTAGAATGCAATGCAATGCTGTAAATAAAATGTAT 14 22447617 0.890200114 5 12 104 0.928571429 1.113943352 0.214285714 0 0 14 1 0 13 X:22447562-22447635 8 CG14621 FBtr0339557 22446988 22447808 CAATGCAA 8mer-A1 dme-miR-33-5p X + 22447549 22447626 3'utr CG14621 FlyBase G47882.1 CGAAAATGTCAAATTTGATTCAGTCAAAAGTGCGTAATATATGTATATATACCTAGAATGCAATGCAATGCTGTAAAT 13 22447608 0.974828724 7 12 76 1 1.380211242 0.208333333 0.461538462 0.708333333 13 0 0 24 X:22447549-22447626 8 9 3565 FBgn0031183 252.9033333 14.79333333 22.64 0.03558672 0.608382154 0.397526502 -8 1 -3.5 0.2 dme-miR-1007-3p 8mer-A1 TGAGCTTA X 2244821 2244828 + X_2244821_2244828_+ 0.531076435 0.614923462 0.572999948 0.059288853 fs(1)K10 FBtr0070396 2244551 2246041 X + 2244791 2244828 3'utr fs(1)K10 FlyBase G58328.1 TTGTCACACGTTGCTTTTGCGACTGAGAACTGAGCTTA 5 2244814 0.955687275 2 5 41 1 0.698970004 0 0 0 5 0 0 5 X:2244791-2244828 8 fs(1)K10 FBtr0070396 2244551 2246041 TGAGCTTA 8mer-A1 dme-miR-1007-3p X + 2244798 2244832 3'utr fs(1)K10 FlyBase G44119.1 ACGTTGCTTTTGCGACTGAGAACTGAGCTTAGAAC 8 2244812 0.817967302 3 6 45 0.666666667 0.903089987 0 0.375 0.583333333 8 4 0 8 X:2244798-2244832 8 5.5 3566 FBgn0000810 232.2533333 9.176666667 14.05666667 0.023681038 0.599346168 0.391273417 7 9 8 0.2 dme-miR-184-5p 7mer-A1 GATAAGA X 22452192 22452198 - X_22452192_22452198_- 0.781926084 0.782911785 0.782418935 0.000696995 wap FBtr0309240|FBtr0339498|FBtr0305147|FBtr0077368 22451554|22451443|22451554|22451998 22453229|22453229|22453229|22453229 X - 22452164 22452222 3'utr wap FlyBase G69546.1 AGCAAACAAACTATGATCATTTCAGATAAGACACGACCCTCCATCAATAATCTCAAATC 10 22452209 0.965462633 5 10 53 1 1.079181246 0.083333333 0.2 0.333333333 10 0 0 12 X:22452164-22452222 7 wap FBtr0305147|FBtr0077368|FBtr0309240|FBtr0339498 22451554|22451998|22451554|22451443 22453229|22453229|22453229|22453229 GATAAGA 7mer-A1 dme-miR-184-5p X - 22452164 22452219 3'utr wap FlyBase G52303.1 AAACAAACTATGATCATTTCAGATAAGACACGACCCTCCATCAATAATCTCAAATC 6 22452209 0.973455655 5 6 34 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 X:22452164-22452219 7 5 3567 FBgn0266848 2356.2 87.30666667 134.59 0.002122061 0.057269395 0.037149863 11 11 11 0.2 dme-miR-14-3p 6mer3-8 AAGACT X 2245896 2245901 + X_2245896_2245901_+ 0.984546949 0.994457653 0.989502301 0.007007994 fs(1)K10 FBtr0070396 2244551 2246041 X + 2245852 2245917 3'utr fs(1)K10 FlyBase G58331.1 AACCCTCAGGTAGCAAAGTAATTTAATTGCAAATAGAGAGTCCTAAGACTAAATAATATATTTAAA 23 2245894 0.856266736 6 16 146 0.730769231 0.801632346 0 0.130434783 0.230769231 23 5 2 19 X:2245852-2245917 6 fs(1)K10 FBtr0070396 2244551 2246041 AAGACT 6mer3-8 dme-miR-14-3p X + 2245876 2245908 3'utr fs(1)K10 FlyBase G44121.1 AATTGCAAATAGAGAGTCCTAAGACTAAATAAT 11 2245895 0.732514331 3 7 60 0.692307692 0.954242509 0 0.181818182 0.307692308 11 4 0 9 X:2245876-2245908 6 15.5 3568 FBgn0000810 232.2533333 9.176666667 14.05666667 0.066737471 1.689066473 1.10267963 2 1 1.5 0.2 dme-miR-932-5p 6mer2-7 GAATTG X 22469100 22469105 + X_22469100_22469105_+ 0.846227315 0.812506721 0.829367018 0.023844065 CG14619 FBtr0339506 22468183 22470146 X + 22469088 22469137 3'utr CG14619 FlyBase G63533.1 AAGCTGAAATCTGAATTGTGAAAACGTACTTATGATAATTGCTAGTAGTA 10 22469103 0.721658443 4 9 64 1 1.113943352 0.230769231 0.3 0.461538462 10 0 0 13 X:22469088-22469137 6 CG14619 FBtr0339506 22468183 22470146 GAATTG 6mer2-7 dme-miR-932-5p X + 22469074 22469149 3'utr CG14619 FlyBase G47891.1 GGGGCCGCGAAGTGAAGCTGAAATCTGAATTGTGAAAACGTACTTATGATAATTGCTAGTAGTACAATTTAAAAAA 9 22469103 0.977015606 4 9 56 1 1.146128036 0.214285714 0.555555556 0.714285714 9 0 0 14 X:22469074-22469149 6 6.5 3569 FBgn0031187 1740.476667 50.81666667 78.19 0.003734609 0.12791079 0.083130835 -3 -3 -3 0.2 dme-miR-980-5p 7mer-A1 AAAAACA X 22474911 22474917 - X_22474911_22474917_- 0.728561538 0.682899666 0.705730602 0.032287768 CG12576 FBtr0077366|FBtr0346429|FBtr0077365|FBtr0335046 22474849|22474849|22474849|22474849 22475730|22475730|22475730|22475730 X - 22474904 22474996 3'utr CG12576 FlyBase G69567.1 TTGTATTCTTATTATTATTTGCGCTTAAAATACATAAGTTATCATTTAAATTGCGAAACAAAACGAAATGTGATTTTGTAAAAACAAAAACTG 95 22474922 0.894943606 13 92 605 0.991869919 2.086359831 0.18699187 0.252631579 0.422764228 95 1 0 122 X:22474904-22474996 7 CG12576 FBtr0335046|FBtr0077365|FBtr0346429|FBtr0077366 22474849|22474849|22474849|22474849 22475730|22475730|22475730|22475730 AAAAACA 7mer-A1 dme-miR-980-5p X - 22474903 22474992 3'utr CG12576 FlyBase G52319.1 ATTCTTATTATTATTTGCGCTTAAAATACATAAGTTATCATTTAAATTGCGAAACAAAACGAAATGTGATTTTGTAAAAACAAAAACTGA 62 22474922 0.964621739 7 60 382 0.989583333 1.977723605 0.15625 0.387096774 0.604166667 62 1 0 95 X:22474903-22474992 7 32.5 3570 FBgn0031190 668.0366667 33.82666667 51.78333333 0.048650024 0.960780449 0.627615063 5 5 5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 2252557 2252562 - X_2252557_2252562_- 0.5810092 0.646910606 0.613959903 0.046599327 CG3091 FBtr0342767|FBtr0342767|FBtr0342767|FBtr0070416|FBtr0070416|FBtr0070416 2252330|2252330|2252330|2252330|2252330|2252330 2252595|2252595|2252595|2252595|2252595|2252595 X - 2252458 2252599 stop_codon CG3091 FlyBase G64359.1 CTGATATCCTGATCATCGAACGTGATATAAACATAAATGTGATCAAGCATCGCGTCTTGCCAAGCGAAGATATCGATTAGTTGGGAAAGTCCCAGAAACACTTACAGGTTCTAGAGCTCAGTGAAGCTGGCCCTCCATTAAG 155 2252572 0.805095617 21 142 867 0.898395722 1.62324929 0.417112299 0.15483871 0.299465241 155 16 3 168 X:2252458-2252599 6 CG3091 FBtr0342767|FBtr0342767|FBtr0342767|FBtr0070416|FBtr0070416|FBtr0070416 2252330|2252330|2252330|2252330|2252330|2252330 2252595|2252595|2252595|2252595|2252595|2252595 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 2252454 2252598 stop_codon CG3091 FlyBase G48507.1 TGATATCCTGATCATCGAACGTGATATAAACATAAATGTGATCAAGCATCGCGTCTTGCCAAGCGAAGATATCGATTAGTTGGGAAAGTCCCAGAAACACTTACAGGTTCTAGAGCTCAGTGAAGCTGGCCCTCCATTAAGAATT 108 2252572 0.793880636 18 92 597 0.853333333 1.329058719 0.44 0.314814815 0.506666667 108 17 5 128 X:2252454-2252598 6 90 3571 FBgn0029608 227.6666667 23.33 35.96333333 0.395314788 3.857693956 2.502548892 10 10 10 0.2 dme-miR-283-5p 8mer-A1 TGATATTA X 2264611 2264618 + X_2264611_2264618_+ 0.480188742 0.566003652 0.523096197 0.060680368 CG3071 FBtr0070398 2264570 2264825 X + 2264585 2264645 3'utr CG3071 FlyBase G58340.1 AGAACAACGATATAGCCACATAGCTTTGATATTAAGTATATAAGTAGTAGTAGTTTAAGTA 12 2264597 0.880785553 5 10 93 0.8 0.602059991 0 0.25 0.4 12 1 2 12 X:2264585-2264645 8 CG3071 FBtr0070398 2264570 2264825 TGATATTA 8mer-A1 dme-miR-283-5p X + 2264579 2264621 3'utr CG3071 FlyBase G44124.1 CGACGTAGAACAACGATATAGCCACATAGCTTTGATATTAAGT 6 2264609 0.971427869 3 6 35 1 0.954242509 0 0.5 0.666666667 6 0 0 9 X:2264579-2264621 8 7.5 3572 FBgn0023527 429.3266667 27.48 42.32666667 0.017469215 0.272925764 0.177193259 14 2 8 0.2 dme-miR-34-5p 7mer-m8 CACTGCC X 2265654 2265660 - X_2265654_2265660_- 0.631753798 0.667724288 0.649739043 0.025434984 CG2924 FBtr0345315|FBtr0346648|FBtr0070412|FBtr0300793 2264989|2264655|2264989|2264989 2265784|2265784|2265784|2265784 X - 2265639 2265711 3'utr CG2924 FlyBase G64367.1 CACACCGCCAAAATTAGCCTGTCCACATCCGCCAAGCACACATCCCGCACTCACTGCCGGCTTGATCTGATAT 13 2265661 0.945534193 3 13 55 1 1.146128036 0 0.076923077 0.142857143 13 0 0 14 X:2265639-2265711 7 CG2924 FBtr0070412|FBtr0300793|FBtr0345315|FBtr0346648 2264989|2264989|2264989|2264655 2265784|2265784|2265784|2265784 CACTGCC 7mer-m8 dme-miR-34-5p X - 2265642 2265674 3'utr CG2924 FlyBase G48513.1 ACACATCCCGCACTCACTGCCGGCTTGATCTGA 6 2265661 0.851107621 2 5 28 0.666666667 0.77815125 0 0.333333333 0.555555556 6 3 0 6 X:2265642-2265674 7 7 3573 FBgn0023528 1233.12 56.31666667 86.87 0.005676658 0.124297129 0.080580177 1 1 1 0.2 dme-bantam-3p 6mer3-8 TGATCT X 2271138 2271143 - X_2271138_2271143_- 0.8990887 0.899043129 0.899065914 3.22E-05 CG2918 FBtr0300792 2271006 2271490 X - 2271120 2271236 3'utr CG2918 FlyBase G64374.1 ATTTTCCATTTCCATACCATTCCGCATAGGAAATACAAGACTTGAAGAAGTACTCACACGGTCCCCTCTATATGTATATCCACTATATCTTATTGATCTATTGTAGCGAAAGTAGCG 60 2271143 0.877547231 14 54 437 0.916666667 1.51851394 0.069444444 0.116666667 0.263888889 60 5 1 66 X:2271120-2271236 6 CG2918 FBtr0300792 2271006 2271490 TGATCT 6mer3-8 dme-bantam-3p X - 2271081 2271165 3'utr CG2918 FlyBase G48517.1 ATGTATATCCACTATATCTTATTGATCTATTGTAGCGAAAGTAGCGAAACGAATTGGGCGGGATGAGTTAATTGCCGAGATAAGA 29 2271143 0.992766432 6 24 271 0.871794872 0.832508913 0.025641026 0.24137931 0.435897436 29 1 4 34 X:2271081-2271165 6 26.5 3574 FBgn0023529 3854.556667 145.7 223.8466667 0.00687498 0.181880577 0.118384609 0 0 0 0.2 dme-miR-1008-3p 7mer-A1 GCTGTGA X 2280400 2280406 - X_2280400_2280406_- 0.568647819 0.657776291 0.613212055 0.063023367 CG2865 FBtr0332962 2278029 2281577 X - 2280371 2280432 3'utr CG2865 FlyBase G64396.2 AAATTTTTTCTTCGAAAAAAATTACGGCTGTGATAGAATTTTAAGTTTTTGGCTAAACAAAA 196 2280410 0.776511659 16 157 1700 0.814814815 1.291270158 0.268518519 0.102040816 0.185185185 196 32 8 176 X:2280371-2280432 7 CG2865 FBtr0332962 2278029 2281577 GCTGTGA 7mer-A1 dme-miR-1008-3p X - 2280364 2280429 3'utr CG2865 FlyBase G48532.1 TTTTTTCTTCGAAAAAAATTACGGCTGTGATAGAATTTTAAGTTTTTGGCTAAACAAAAAAAGAAG 158 2280411 0.989003778 15 135 1352 0.882629108 1.672097858 0.248826291 0.259493671 0.450704225 158 22 3 188 X:2280364-2280429 7 173.5 3575 FBgn0023526 330.04 10.34 15.85333333 0.525693855 16.7794971 10.94407065 4 5 4.5 0.2 dme-miR-33-5p 8mer-A1 CAATGCAA X 2280802 2280809 - X_2280802_2280809_- 0.633181498 0.630525819 0.631853659 0.001877863 CG2865 FBtr0332962 2278029 2281577 X - 2280789 2280827 3'utr CG2865 FlyBase G64400.1 AAACAAAAAAAAAACAAACAATGCAAGGTTTCATTTATT 50 2280806 0.922489444 3 49 172 1 1.785329835 0 0.1 0.262295082 50 0 0 61 X:2280789-2280827 8 CG2865 FBtr0332962 2278029 2281577 CAATGCAA 8mer-A1 dme-miR-33-5p X - 2280790 2280826 3'utr CG2865 FlyBase G48534.1 AACAAAAAAAAAACAAACAATGCAAGGTTTCATTTAT 30 2280806 0.915976108 2 29 98 0.976744186 1.62324929 0 0.333333333 0.534883721 30 1 0 42 X:2280790-2280826 8 39.5 3576 FBgn0023526 330.04 10.34 15.85333333 0.119682463 3.820116054 2.491589571 -3 -3 -3 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA X 2280908 2280914 - X_2280908_2280914_- 0.822160528 0.771122176 0.796641352 0.036089528 CG2865 FBtr0332962 2278029 2281577 X - 2280899 2280932 3'utr CG2865 FlyBase G64401.1 AAAACCTCCGAAGTTCTCCTAGTCATACAAAAAA 7 2280916 0.624495836 4 7 38 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 X:2280899-2280932 7 CG2865 FBtr0332962 2278029 2281577 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X - 2280902 2280929 3'utr CG2865 FlyBase G48535.1 ACCTCCGAAGTTCTCCTAGTCATACAAA 5 2280907 0.92735952 2 5 27 1 0.903089987 0.25 0.4 0.625 5 0 0 8 X:2280902-2280929 7 6 3577 FBgn0023526 330.04 10.34 15.85333333 0.018179615 0.580270793 0.378469302 2 -7 -2.5 0.2 dme-miR-305-5p 7mer-A1 GTACAAA X 2281375 2281381 - X_2281375_2281381_- 0.773543964 0.772266345 0.772905154 0.00090347 CG2865 FBtr0332962 2278029 2281577 X - 2281340 2281456 3'utr CG2865 FlyBase G64402.1 ATTATTATATAGGAAGGAGCAGGAAGATGATCGGGCGGATTGGCCAGTATTACTCATTAATGGCAGTCGCGATTTGTACAAACAAAAATACACAAAAAATTAGTTGTAGGCAATTGA 92 2281383 0.968749913 18 86 476 0.940594059 1.375663614 0.188118812 0.086956522 0.168316832 92 3 3 95 X:2281340-2281456 7 CG2865 FBtr0332962 2278029 2281577 GTACAAA 7mer-A1 dme-miR-305-5p X - 2281346 2281499 3'utr CG2865 FlyBase G48537.1 AAGCGAACATTTAGGCTATGACCCATATGCTAATCTCTAAGCTATTATTATATAGGAAGGAGCAGGAAGATGATCGGGCGGATTGGCCAGTATTACTCATTAATGGCAGTCGCGATTTGTACAAACAAAAATACACAAAAAATTAGTTGTAGGC 70 2281383 0.957083362 14 68 329 0.98245614 1.748188027 0.228070175 0.428571429 0.649122807 70 1 1 112 X:2281346-2281499 7 51 3578 FBgn0023526 330.04 10.34 15.85333333 0.154526724 4.932301741 3.216989066 2 2 2 0.2 dme-miR-277-3p 6mer2-7 GCATTT X 22826469 22826474 - X_22826469_22826474_- 0.998912522 0.971766698 0.98533961 0.019194979 fog FBtr0333180|FBtr0100538|FBtr0333179|FBtr0077342|FBtr0333182|FBtr0333181 22826160|22826160|22826160|22826160|22824315|22826160 22827046|22827046|22827046|22827046|22827046|22827046 X - 22826458 22826505 3'utr fog FlyBase G69600.2 AACTCATATATTCATTGTGCGTACAGTCTGAGCATTTGTTGTATATAC 31 22826485 0.75052404 9 25 213 0.897435897 1.544068044 0.179487179 0.258064516 0.41025641 31 4 0 35 X:22826458-22826505 6 fog FBtr0333182|FBtr0333181|FBtr0333179|FBtr0077342|FBtr0333180|FBtr0100538 22824315|22826160|22826160|22826160|22826160|22826160 22827046|22827046|22827046|22827046|22827046|22827046 GCATTT 6mer2-7 dme-miR-277-3p X - 22826449 22826525 3'utr fog FlyBase G52343.1 ACTACTATTATTACCATTGTAACTCATATATTCATTGTGCGTACAGTCTGAGCATTTGTTGTATATACATTAGTGAA 21 22826485 0.776502947 11 20 164 0.962962963 1.414973348 0.185185185 0.238095238 0.407407407 21 1 0 26 X:22826449-22826525 6 21 3579 FBgn0000719 1767.816667 49.34333333 75.43666667 0.01187906 0.425589408 0.278379214 11 11 11 0.2 dme-miR-308-3p 7mer-m1 TGTGATT X 22826605 22826611 - X_22826605_22826611_- 0.505825679 0.504802156 0.505313917 0.000723724 fog FBtr0333180|FBtr0100538|FBtr0333179|FBtr0077342|FBtr0333182|FBtr0333181 22826160|22826160|22826160|22826160|22824315|22826160 22827046|22827046|22827046|22827046|22827046|22827046 X - 22826565 22826674 3'utr fog FlyBase G69601.2 ACATTACAATAGTTTTATATGTGAGCGCTGCTGTCGCTGTTGCGAGCCTTAGCAATATTTCATTGTGATTACTTAGGCATATGAATTGATCGTTAGACTTAGGAAATCTT 402 22826612 0.878730335 28 349 4105 0.877083333 1.177124064 0.0625 0.167082294 0.304166667 401 32 27 421 X:22826565-22826674 7 fog FBtr0333182|FBtr0333181|FBtr0333179|FBtr0077342|FBtr0333180|FBtr0100538 22824315|22826160|22826160|22826160|22826160|22826160 22827046|22827046|22827046|22827046|22827046|22827046 TGTGATT 7mer-m1 dme-miR-308-3p X - 22826530 22826671 3'utr fog FlyBase G52344.1 TTACAATAGTTTTATATGTGAGCGCTGCTGTCGCTGTTGCGAGCCTTAGCAATATTTCATTGTGATTACTTAGGCATATGAATTGATCGTTAGACTTAGGAAATCTTATTTGTATATCCAGAATCTTTTGATGTATCTTTTT 235 22826612 0.744487624 30 212 2291 0.904494382 1.604765885 0.084269663 0.395744681 0.601123596 235 27 7 322 X:22826530-22826671 7 253 3580 FBgn0000719 1767.816667 49.34333333 75.43666667 0.143114388 5.127339053 3.353806725 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 23012360 23012366 - X_23012360_23012366_- 0.751730685 0.759562757 0.755646721 0.005538131 Rab21 FBtr0299903|FBtr0299903|FBtr0299903|FBtr0336924|FBtr0336924|FBtr0336924|FBtr0111134|FBtr0111134|FBtr0111134 23012138|23012138|23012138|23012138|23012138|23012138|23012138|23012138|23012138 23012376|23012376|23012376|23012376|23012376|23012376|23012376|23012376|23012376 X - 23012343 23012415 stop_codon Rab21 FlyBase G69625.1 GGAGATCCTGCGGGCCAGCGGTCCTGTTGCGGCATTTAGCCGTTCCCATTGTGATAGTAATCATAACTATAAA 97 23012367 0.740996206 12 90 684 0.919354839 1.278753601 0.088709677 0.237113402 0.403225806 97 5 5 114 X:23012343-23012415 7 Rab21 FBtr0111134|FBtr0111134|FBtr0111134|FBtr0336924|FBtr0336924|FBtr0336924|FBtr0299903|FBtr0299903|FBtr0299903 23012138|23012138|23012138|23012138|23012138|23012138|23012138|23012138|23012138 23012376|23012376|23012376|23012376|23012376|23012376|23012376|23012376|23012376 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 23012292 23012416 stop_codon Rab21 FlyBase G52364.1 CGGAGATCCTGCGGGCCAGCGGTCCTGTTGCGGCATTTAGCCGTTCCCATTGTGATAGTAATCATAACTATAAAATAGTAGACCTTTAACCGATGTTGATCTTGTGTATATATTATACATAGATA 94 23012367 0.977557566 19 89 737 0.961538462 1.397940009 0.084615385 0.319148936 0.507692308 94 1 4 125 X:23012292-23012416 7 69 3581 FBgn0039966 49 5.726666667 8.77 1.408163265 12.04889406 7.867730901 1 1 1 0.2 dme-bantam-3p 8mer-A1 TGATCTCA X 23080962 23080969 - X_23080962_23080969_- 0.631122791 0.631104646 0.631113719 1.29E-05 CG17163 FBtr0113727|FBtr0309316 23080869|23080757 23081631|23081631 X - 23080920 23081098 3'utr CG17163 FlyBase G69629.1 CTTATATATTTACAAATGTACTTATATATCTTTAAGATAAATAGTGTACACGCCTAGATACACTCCAATTAATTAACTTTGGGTATCGTTCTACGAATTTTGCATACTGGATGTGTATTAAGGTGTATTTGATCTCATTCAATGATATTATTTGTGATGTAACAACTTCAAGGTAATTT 191 23080970 0.991529555 25 180 1950 0.941176471 1.84094208 0.113122172 0.109947644 0.230769231 191 11 2 208 X:23080920-23081098 8 CG17163 FBtr0309316|FBtr0113727 23080757|23080869 23081631|23081631 TGATCTCA 8mer-A1 dme-bantam-3p X - 23080899 23080998 3'utr CG17163 FlyBase G52367.1 TGCATACTGGATGTGTATTAAGGTGTATTTGATCTCATTCAATGATATTATTTGTGATGTAACAACTTCAAGGTAATTTCAATTATTCCCCTAAATGAAA 103 23080970 0.992618809 18 100 1158 0.979452055 2.155336037 0.123287671 0.359223301 0.547945205 103 3 0 143 X:23080899-23080998 8 100.5 3582 FBgn0039942 110.9 8.843333333 13.50666667 0.906221821 11.36449303 7.44076999 1 1 1 0.2 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG X 2343442 2343448 + X_2343442_2343448_+ 0.67451993 0.674013045 0.674266487 0.000358432 phl FBtr0344007|FBtr0070401 2343430|2343430 2343870|2343870 X + 2343419 2343493 stop_codon phl FlyBase G58350.1 TGGGAATATCTAGACAGCGACCTGTACCTGTACTTACATATATCCTGCGTGATCAACGTGATCCTACATCTATAT 197 2343441 0.908237134 10 190 1127 0.96812749 2.084576278 0.011952191 0.208121827 0.378486056 197 7 1 243 X:2343419-2343493 7 phl FBtr0344007|FBtr0070401 2343430|2343430 2343870|2343870 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" X + 2343425 2343471 stop_codon phl FlyBase G44131.1 TATCTAGACAGCGACCTGTACCTGTACTTACATATATCCTGCGTGAT 130 2343441 0.905856282 6 126 716 0.961352657 2.298853076 0 0.415384615 0.632850242 130 8 0 199 X:2343425-2343471 7 160 3583 FBgn0003079 445.6666667 16.59666667 25.57666667 0.359012715 9.640490058 6.255701812 1 1 1 0.2 dme-miR-14-3p 6mer3-8 AAGACT X 2444528 2444533 - X_2444528_2444533_- 0.998426025 0.999653392 0.999039709 0.000867903 boi FBtr0070457|FBtr0334883|FBtr0303887|FBtr0303886|FBtr0070458 2444165|2444165|2444165|2444165|2444165 2445050|2445050|2445050|2445050|2445050 X - 2444477 2444607 3'utr boi FlyBase G64423.1 TGCTGCTTCGTTTTGTTTTAGTTAAATATTGAATTTGAAAATATACAAACTTTAGTATAAGGAATTGGTAATGTAAGACTTTTTTCGTTGCTGCCGGCCAGATAGTCAGTAGAATTACTAATGTTAAGTTT 137 2444536 0.990803267 24 129 1338 0.933333333 2.187520721 0.2 0.145985401 0.290909091 137 11 0 154 X:2444477-2444607 6 boi FBtr0303886|FBtr0070458|FBtr0334883|FBtr0303887|FBtr0070457 2444165|2444165|2444165|2444165|2444165 2445050|2445050|2445050|2445050|2445050 AAGACT 6mer3-8 dme-miR-14-3p X - 2444434 2444577 3'utr boi FlyBase G48554.1 GAATTTGAAAATATACAAACTTTAGTATAAGGAATTGGTAATGTAAGACTTTTTTCGTTGCTGCCGGCCAGATAGTCAGTAGAATTACTAATGTTAAGTTTTTTTTTTTATTATTGATAGAACTATTTCGGGGGCCAAATTTTA 109 2444536 0.790149557 19 98 988 0.917721519 1.860338007 0.208860759 0.348623853 0.550632911 109 12 1 145 X:2444434-2444577 6 93 3584 FBgn0040388 902.53 28.22 43.69666667 0.103043666 3.295535082 2.128308795 3 3 3 0.2 dme-miR-1007-3p 6mer3-8 TGAGCT X 2444683 2444688 - X_2444683_2444688_- 0.989101349 0.987158413 0.988129881 0.001373838 boi FBtr0070457|FBtr0334883|FBtr0303887|FBtr0303886|FBtr0070458 2444165|2444165|2444165|2444165|2444165 2445050|2445050|2445050|2445050|2445050 X - 2444661 2444707 3'utr boi FlyBase G64424.1 TCAAGTTTTGTTTTCATTTTGAGCTCATTAAAATGTATTTCGAGCAG 99 2444689 0.790743353 6 99 1251 1 2.041392685 0.154545455 0.090909091 0.181818182 99 0 0 110 X:2444661-2444707 6 boi FBtr0303886|FBtr0070458|FBtr0334883|FBtr0303887|FBtr0070457 2444165|2444165|2444165|2444165|2444165 2445050|2445050|2445050|2445050|2445050 TGAGCT 6mer3-8 dme-miR-1007-3p X - 2444667 2444705 3'utr boi FlyBase G48555.1 AAGTTTTGTTTTCATTTTGAGCTCATTAAAATGTATTTC 49 2444689 0.792873835 4 47 599 0.966666667 1.763427994 0.25 0.183673469 0.333333333 49 2 0 58 X:2444667-2444705 6 74 3585 FBgn0040388 902.53 28.22 43.69666667 0.081991734 2.622253721 1.69349302 1 1 1 0.2 dme-miR-79-3p 8mer-A1 TAGCTTTA X 2444846 2444853 - X_2444846_2444853_- 0.611982295 0.605058901 0.608520598 0.004895583 boi FBtr0070457|FBtr0334883|FBtr0303887|FBtr0303886|FBtr0070458 2444165|2444165|2444165|2444165|2444165 2445050|2445050|2445050|2445050|2445050 X - 2444808 2444875 3'utr boi FlyBase G64425.2 GCAGCTCGAAACCCTCGAATATTAGCTTTAAGGCACCCGGTACTGTTTAGTTTTCCAAAAAACCAATT 132 2444854 0.699320215 12 123 872 0.952702703 2.149219113 0.114864865 0.098484848 0.195945946 132 7 0 141 X:2444808-2444875 8 boi FBtr0303886|FBtr0070458|FBtr0334883|FBtr0303887|FBtr0070457 2444165|2444165|2444165|2444165|2444165 2445050|2445050|2445050|2445050|2445050 TAGCTTTA 8mer-A1 dme-miR-79-3p X - 2444737 2445082 stop_codon boi FlyBase G48556.1 CGTCGGGCAGTCTGAACAGTATTGAGGTGTGATGGCTCGCAGAGGAGGCAACTAACTAGTGGACTAGTGGGCGGAGCAGCACAACGAGGAGAAATATACCTAAGCGGCAAGCGAAAGTGGTTCCCCAAAAACAGACAGTTTCAAGTAGACTTAAGGATCCGAAACTAGATGTGTATTATTGAGATAATCGTAGGACAGGTCGGCAGAGCAGCTCGAAACCCTCGAATATTAGCTTTAAGGCACCCGGTACTGTTTAGTTTTCCAAAAAACCAATTAATTTGGCCAATCATTAAGCTTAGAACTAGGGAATTTGCCATTAACAGAAGTTTCTGTCGTTTCAAATGCT 176 2444854 0.971450702 42 168 956 0.966292135 2.411619706 0.183520599 0.380681818 0.5917603 176 9 0 258 X:2444737-2445082 8 80.5 3586 FBgn0040388 902.53 28.22 43.69666667 0.089193711 2.852586818 1.842245785 1 1 1 0.2 dme-miR-34-5p 7mer-A1 ACTGCCA X 253453 253459 + X_253453_253459_+ 0.738253289 0.699582656 0.718917973 0.027344243 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 X + 253422 253480 3'utr G9a FlyBase G57695.1 TCGAAGCCCGGTCGGCTTTCTTTCTTTTTTGACTGCCAAATGTTTCGTGGTTAACCACT 25 253450 0.936675989 8 23 248 0.935483871 1.462397998 0.193548387 0.24 0.387096774 25 2 0 29 X:253422-253480 7 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 ACTGCCA 7mer-A1 dme-miR-34-5p X + 253425 253472 3'utr G9a FlyBase G43659.1 AAGCCCGGTCGGCTTTCTTTCTTTTTTGACTGCCAAATGTTTCGTGGT 14 253450 0.70470411 5 14 157 1 1.146128036 0.428571429 0 0 14 0 0 14 X:253425-253472 7 17.5 3587 FBgn0040372 792.6533333 13.78666667 21.11333333 0.022077747 1.26934236 0.82886012 3 3 3 0.2 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG X 253581 253587 + X_253581_253587_+ 0.664271499 0.631929104 0.648100301 0.02286953 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 X + 253537 253598 3'utr G9a FlyBase G57696.1 TTGTATTAATGTTTTACGCCTTATTAATAATGTTTTTATTCTTAGTACCTGTAAAAACAAAT 9 253588 0.982593782 5 9 72 1 1 0 0.111111111 0.2 9 0 0 10 X:253537-253598 7 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" X + 253565 253609 3'utr G9a FlyBase G43660.1 AATGTTTTTATTCTTAGTACCTGTAAAAACAAATTAGTTTATACT 6 253587 0.985584871 4 5 49 0.714285714 0.698970004 0 0.166666667 0.285714286 6 2 0 5 X:253565-253609 7 6.5 3588 FBgn0040372 792.6533333 13.78666667 21.11333333 0.008200306 0.471470019 0.30786233 -7 -6 -6.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 253766 253773 + X_253766_253773_+ 0.62552172 0.63063144 0.62807658 0.003613104 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 X + 253730 253787 3'utr G9a FlyBase G57698.1 CAGGCATAAAATAGAATTGTAATGGAGGAAAGACCATCTAGTCATAAGAATGAAGGAG 50 253766 0.936809497 6 48 185 0.967741935 1.477121255 0.338709677 0.22 0.370967742 50 1 1 60 X:253730-253787 8 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X + 253742 253793 3'utr G9a FlyBase G43662.1 AGAATTGTAATGGAGGAAAGACCATCTAGTCATAAGAATGAAGGAGACAAAG 25 253766 0.913735943 5 25 98 1 1.62324929 0.428571429 0.52 0.714285714 25 0 0 42 X:253742-253793 8 37 3589 FBgn0040372 792.6533333 13.78666667 21.11333333 0.046678666 2.683752418 1.752447111 0 0 0 0.2 dme-miR-304-5p 8mer-A1 TGAGATTA X 2583759 2583766 - X_2583759_2583766_- 0.625299342 0.618833704 0.622066523 0.00457187 CG13760 FBtr0308567|FBtr0300707 2583743|2583743 2584291|2584291 X - 2583741 2583776 3'utr CG13760 FlyBase G64452.1 AGAAAATAAATGAGATTATTGTTCCAAATGTGAGCC 6 2583766 0.969312862 2 6 36 1 0.903089987 0.25 0.166666667 0.375 6 0 0 8 X:2583741-2583776 8 CG13760 FBtr0300707|FBtr0308567 2583743|2583743 2584291|2584291 TGAGATTA 8mer-A1 dme-miR-304-5p X - 2583751 2583786 3'utr CG13760 FlyBase G48573.1 ATGTATATGTAGAAAATAAATGAGATTATTGTTCCA 8 2583766 0.892965065 2 8 67 1 1.113943352 0.076923077 0.375 0.615384615 8 0 0 13 X:2583751-2583786 8 7 3590 FBgn0040375 102.9966667 8.843333333 13.49 0.067963365 0.791556728 0.518902891 0 0 0 0.2 dme-miR-283-5p 8mer-A1 TGATATTA X 2584160 2584167 - X_2584160_2584167_- 0.388848496 0.440529916 0.414689206 0.036544268 CG13760 FBtr0308567|FBtr0300707 2583743|2583743 2584291|2584291 X - 2584114 2584254 3'utr CG13760 FlyBase G64453.1 CAGATGAATTGATGAACAGATGAACAGAAGTACCTGCCGTCGCCAGGTTGCCAGGTGATGAGAACGGATGATTGGAATCTGCGCTTGTGATATTAGGACTTTAGGAGGAGACCTTGTAGGGGGGGACTTCGAGTGGGAGGT 257 2584171 0.986532939 24 233 1991 0.9 1.638489257 0.306896552 0.120622568 0.220689655 257 24 5 261 X:2584114-2584254 8 CG13760 FBtr0300707|FBtr0308567 2583743|2583743 2584291|2584291 TGATATTA 8mer-A1 dme-miR-283-5p X - 2584119 2584268 3'utr CG13760 FlyBase G48574.1 GATGAACAAATGAACAGATGAATTGATGAACAGATGAACAGAAGTACCTGCCGTCGCCAGGTTGCCAGGTGATGAGAACGGATGATTGGAATCTGCGCTTGTGATATTAGGACTTTAGGAGGAGACCTTGTAGGGGGGGACTTCGAGTGG 241 2584171 0.985010102 27 220 1786 0.924637681 1.901730692 0.31884058 0.315352697 0.52173913 241 23 3 319 X:2584119-2584268 8 171.5 3591 FBgn0040375 102.9966667 8.843333333 13.49 1.66510243 19.39313984 12.71312083 4 4 4 0.2 dme-bantam-3p 6mer3-8 TGATCT X 2588033 2588038 + X_2588033_2588038_+ 0.862853596 0.847899224 0.85537641 0.010574358 wds FBtr0308566 2587628 2588217 X + 2587936 2588067 3'utr wds FlyBase G58370.1 ATTAGCCTATTGTATTGGCCCACCATGCAAGCGAGAATATTCCCCCAAAATTGTTTGTAACCTTTGACACAGCCACGCAAACCAACATAACTTATAATGATCTTTCGGTGACGAGAAAACTAAATTTAAGCG 184 2588033 0.986420856 14 179 1531 0.976525822 2.318063335 0.34741784 0.114130435 0.234741784 184 5 0 208 X:2587936-2588067 6 wds FBtr0308566 2587628 2588217 TGATCT 6mer3-8 dme-bantam-3p X + 2588015 2588066 3'utr wds FlyBase G44142.1 AACCAACATAACTTATAATGATCTTTCGGTGACGAGAAAACTAAATTTAAGC 91 2588033 0.768524075 7 87 756 0.95862069 1.841984805 0.427586207 0.417582418 0.634482759 91 5 1 139 X:2588015-2588066 6 133 3592 FBgn0040066 310 19.74666667 30.31666667 0.429032258 6.735313977 4.387025838 0 0 0 0.2 dme-miR-14-3p 6mer3-8 AAGACT X 2606789 2606794 + X_2606789_2606794_+ 0.999859346 0.645821196 0.822840271 0.250342741 Zw10 FBtr0070441 2606528 2606824 X + 2606763 2606811 3'utr Zw10 FlyBase G58405.1 CCGCAACGCAACACAATATTTAACTTAAGACTTATTTAAATGAATAAAA 14 2606797 0.988322601 6 14 130 1 1.204119983 0.0625 0.142857143 0.25 14 0 0 16 X:2606763-2606811 6 Zw10 FBtr0070441 2606528 2606824 AAGACT 6mer3-8 dme-miR-14-3p X + 2606777 2606812 3'utr Zw10 FlyBase G44173.1 AATATTTAACTTAAGACTTATTTAAATGAATAAAAA 8 2606798 0.702054497 3 7 71 0.909090909 1 0 0.25 0.454545455 8 1 0 10 X:2606777-2606812 6 10.5 3593 FBgn0004643 521.4966667 24.47 37.23 0.020134357 0.429096853 0.28203062 -8 -9 -8.5 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA X 2617896 2617903 - X_2617896_2617903_- 0.623701129 0.622508364 0.623104747 0.000843366 Tsp3A FBtr0307159 2617756 2618435 X - 2617882 2617920 3'utr Tsp3A FlyBase G64495.1 TACTCGCTGAAATTCGATGCATTTATTTATATGTAATTC 20 2617904 0.788522122 6 17 203 0.869565217 1.301029996 0.47826087 0.15 0.260869565 20 3 0 20 X:2617882-2617920 8 Tsp3A FBtr0307159 2617756 2618435 TGCATTTA 8mer-A1 dme-miR-277-3p X - 2617822 2617920 3'utr Tsp3A FlyBase G48605.1 TACTCGCTGAAATTCGATGCATTTATTTATATGTAATTCCTTCGAAAAAAAAGCAACAAACAGTGCGCACAAATCTTGAATATCTATTCATCCAGAACC 30 2617904 0.978834267 11 24 220 0.80952381 0.929418926 0.285714286 0.333333333 0.523809524 30 5 3 34 X:2617822-2617920 8 17 3594 FBgn0040334 330.6633333 22.46333333 34.46666667 0.051411809 0.756788841 0.493230174 1 1 1 0.2 dme-miR-34-5p 6mer2-7 ACTGCC X 2618037 2618042 - X_2618037_2618042_- 0.999729107 0.99874576 0.999237433 0.000695298 Tsp3A FBtr0307159 2617756 2618435 X - 2618021 2618104 3'utr Tsp3A FlyBase G64497.1 TACTTGCATGTTTTGTGCGAGGTGTGTGTATTTTCAATTCCATATTACTTATGTTGTAATCGACTGCCTGGATAGCTGTATATA 26 2618036 0.817471291 10 25 216 0.96875 1.491361694 0.25 0.192307692 0.34375 26 1 0 31 X:2618021-2618104 6 Tsp3A FBtr0307159 2617756 2618435 ACTGCC 6mer2-7 dme-miR-34-5p X - 2618015 2618054 3'utr Tsp3A FlyBase G48607.1 ATGTTGTAATCGACTGCCTGGATAGCTGTATATACTCGTA 14 2618050 0.785712331 6 14 99 1 1.230448921 0.235294118 0.142857143 0.294117647 14 0 0 17 X:2618015-2618054 6 17 3595 FBgn0040334 330.6633333 22.46333333 34.46666667 0.051411809 0.756788841 0.493230174 -6 8 1 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 2621819 2621825 + X_2621819_2621825_+ 0.816612662 0.816203646 0.816408154 0.000289277 Seipin FBtr0070442 2621718 2622140 X + 2621754 2621887 3'utr Seipin FlyBase G58413.1 ATGGAACGAAAGAGGGACCACCATTAACCACCGAAGGCTAGACCAACGCCCGTGCGACGCTTGAGCCAAAGACTAAATAGATTTAGGACTAAGTTAGTGAACACAGCCAGCTGAAGTATTCCGGCGGATTAGCT 89 2621815 0.962228355 14 82 416 0.91 1.481920138 0.14 0.101123596 0.2 89 7 2 91 X:2621754-2621887 7 Seipin FBtr0070442 2621718 2622140 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X + 2621760 2621854 3'utr Seipin FlyBase G44177.1 CGAAAGAGGGACCACCATTAACCACCGAAGGCTAGACCAACGCCCGTGCGACGCTTGAGCCAAAGACTAAATAGATTTAGGACTAAGTTAGTGAA 61 2621815 0.958105488 10 56 267 0.928571429 1.658011397 0.102040816 0.426229508 0.642857143 61 6 1 91 X:2621760-2621854 7 61 3596 FBgn0040336 110.8766667 6.436666667 9.653333333 0.550160839 9.476954946 6.319060773 4 4 4 0.2 dme-miR-305-5p 6mer2-7 GTACAA X 2633606 2633611 + X_2633606_2633611_+ 0.708178856 0.820440769 0.764309812 0.079381151 PI4KIIIalpha FBtr0331587 2633296 2633672 X + 2633561 2633647 3'utr PI4KIIIalpha FlyBase G58443.1 ATTTATAAATATTAAATCAATTATAGGGCAATATGTTATATAATGGTACAACAAGAAATGTATTATTAGAGGGAAGTGGATGTCGTT 16 2633604 0.983540521 5 14 113 0.913043478 1.021189299 0.217391304 0.3125 0.52173913 16 1 1 21 X:2633561-2633647 6 PI4KIIIalpha FBtr0331587 2633296 2633672 GTACAA 6mer2-7 dme-miR-305-5p X + 2633559 2633656 3'utr PI4KIIIalpha FlyBase G44204.1 ATATTTATAAATATTAAATCAATTATAGGGCAATATGTTATATAATGGTACAACAAGAAATGTATTATTAGAGGGAAGTGGATGTCGTTTTTGGTGGT 13 2633603 0.983686763 7 13 104 1 1.230448921 0.470588235 0.307692308 0.470588235 13 0 0 17 X:2633559-2633656 6 8.5 3597 FBgn0267350 1055.98 18.11666667 27.74666667 0.008049395 0.469181233 0.306343104 2 3 2.5 0.2 dme-miR-7-5p 6mer3-8 GTCTTC X 2695020 2695025 - X_2695020_2695025_- 0.924348289 0.999990857 0.962169573 0.053487395 CG2658 FBtr0070502|FBtr0345716 2694721|2694390 2695063|2695063 X - 2694950 2695039 3'utr CG2658 FlyBase G64508.1 AAGTCATAGCCATAGTCTTCGTACGCCACGTGCCCCTAGTCGCTCACCTTTTCGCCCGCCCCTGGCTCATGTGCGTTGAATGTAAATAAA 12 2695032 0.969947572 9 11 62 0.933333333 1.146128036 0.133333333 0.166666667 0.333333333 12 1 0 14 X:2694950-2695039 6 CG2658 FBtr0070502|FBtr0345716 2694721|2694390 2695063|2695063 GTCTTC 6mer3-8 dme-miR-7-5p X - 2694946 2695049 3'utr CG2658 FlyBase G48614.1 CTCAGATCGCAAGTCATAGCCATAGTCTTCGTACGCCACGTGCCCCTAGTCGCTCACCTTTTCGCCCGCCCCTGGCTCATGTGCGTTGAATGTAAATAAAGTTG 15 2695033 0.973421513 8 15 90 1 1.342422681 0.090909091 0.266666667 0.5 15 0 0 22 X:2694946-2695049 6 6 3598 FBgn0024992 506.2333333 20.17 30.76333333 0.011852242 0.297471492 0.195037382 7 8 7.5 0.2 dme-miR-308-3p 7mer-m1 TGTGATT X 269695 269701 - X_269695_269701_- 0.498836749 0.497636691 0.49823672 0.000848528 ewg FBtr0332978|FBtr0332976|FBtr0332977|FBtr0308209|FBtr0089441|FBtr0308208 269590|269590|269590|269609|269609|269609 273303|270568|270568|270568|270568|270568 X - 269658 269728 3'utr ewg FlyBase G63738.1 AAATTTTATTTAAAAAAAAGCGATTGTTGTGATTTTAATATAATTTTACCTTAAAATATTTGCTTGTACAT 89 269704 0.98749666 8 88 922 0.990291262 2.008600172 0.097087379 0.146067416 0.262135922 89 1 0 102 X:269658-269728 7 ewg FBtr0089441|FBtr0308208|FBtr0332977|FBtr0308209|FBtr0332976|FBtr0332978 269609|269609|269590|269609|269590|269590 270568|270568|270568|270568|270568|273303 TGTGATT 7mer-m1 dme-miR-308-3p X - 269676 269728 3'utr ewg FlyBase G48050.1 AAATTTTATTTAAAAAAAAGCGATTGTTGTGATTTTAATATAATTTTACCTTA 55 269704 0.81827912 7 53 576 0.973684211 1.86923172 0.065789474 0.254545455 0.460526316 55 2 0 74 X:269676-269728 7 71.5 3599 FBgn0005427 485.9333333 14.70333333 22.51 0.147139525 4.862842893 3.17636606 3 3 3 0.2 dme-miR-2535b-3p 8mer-m1 CCGTGAGT X 270080 270087 - X_270080_270087_- 0.42821006 0.452570658 0.440390359 0.017225545 ewg FBtr0332978|FBtr0332976|FBtr0332977|FBtr0308209|FBtr0089441|FBtr0308208 269590|269590|269590|269609|269609|269609 273303|270568|270568|270568|270568|270568 X - 270066 270121 3'utr ewg FlyBase G63739.1 ATCAGCCAGCCTACAGTTAGACGTACCTGTAACCCCGTGAGTTCTCGCTCCATACC 32 270092 0.784666311 7 31 159 0.976744186 1.62324929 0.093023256 0.3125 0.488372093 32 1 0 42 X:270066-270121 8 ewg FBtr0089441|FBtr0308208|FBtr0332977|FBtr0308209|FBtr0332976|FBtr0332978 269609|269609|269590|269609|269590|269590 270568|270568|270568|270568|270568|273303 CCGTGAGT 8mer-m1 dme-miR-2535b-3p X - 270067 270119 3'utr ewg FlyBase G48051.1 CAGCCAGCCTACAGTTAGACGTACCTGTAACCCCGTGAGTTCTCGCTCCATAC 24 270092 0.719497235 5 20 128 0.853658537 1.243038049 0.048780488 0.416666667 0.658536585 24 5 1 35 X:270067-270119 8 20.5 3600 FBgn0005427 485.9333333 14.70333333 22.51 0.042186857 1.394241669 0.910706353 5 5 5 0.2 dme-bantam-3p 8mer-A1 TGATCTCA X 270995 271002 - X_270995_271002_- 0.612546258 0.562343602 0.58744493 0.03549867 ewg FBtr0332978 269590 273303 X - 270977 271032 3'utr ewg FlyBase G63747.1 TGGGAAATGGCGGCGTTCAGTGCTATTCGCTGATCTCAGCGGGATCGTCAGTCCTA 57 271002 0.781620344 6 52 383 0.955223881 1.329058719 0.253731343 0.175438596 0.298507463 57 1 2 64 X:270977-271032 8 ewg FBtr0332978 269590 273303 TGATCTCA 8mer-A1 dme-bantam-3p X - 270969 271041 3'utr ewg FlyBase G48057.1 CATCCTCTTTGGGAAATGGCGGCGTTCAGTGCTATTCGCTGATCTCAGCGGGATCGTCAGTCCTAAGCCGGCG 35 271002 0.814625189 5 31 219 0.898305085 1.72427587 0.220338983 0.558823529 0.745762712 34 6 0 53 X:270969-271041 8 41.5 3601 FBgn0005427 485.9333333 14.70333333 22.51 0.085402662 2.822489231 1.843625056 0 0 0 0.2 dme-bantam-3p 8mer-A1 TGATCTCA X 271178 271185 - X_271178_271185_- 0.629789419 0.627554058 0.628671739 0.001580596 ewg FBtr0332978|FBtr0100578|FBtr0100582 269590|268507|268507 273303|271561|271561 X - 271121 271211 intron-5'utr ewg FlyBase G63748.1 AGGATATCCCGTTTCGGTGAGCAATGTGATCTCAGTTCCCGTCTCTATGTACCAGTCGGTAATGGCCAACGTGCAGCAGATCCAGACGAAC 63 271185 0.987010927 12 61 528 0.958333333 1.838849091 0.166666667 0.142857143 0.25 63 3 0 69 X:271121-271211 8 ewg FBtr0100582|FBtr0332978|FBtr0100578 268507|269590|268507 271561|273303|271561 TGATCTCA 8mer-A1 dme-bantam-3p X - 271136 271211 intron-5'utr ewg FlyBase G48058.1 AGGATATCCCGTTTCGGTGAGCAATGTGATCTCAGTTCCCGTCTCTATGTACCAGTCGGTAATGGCCAACGTGCAG 53 271186 0.983633203 9 50 422 0.942857143 1.342422681 0.228571429 0.264150943 0.442857143 53 2 2 66 X:271136-271211 8 55 3602 FBgn0005427 485.9333333 14.70333333 22.51 0.11318425 3.740648379 2.443358507 0 1 0.5 0.2 dme-miR-1008-3p 7mer-A1 GCTGTGA X 2717226 2717232 + X_2717226_2717232_+ 0.469574219 0.459460949 0.464517584 0.007151183 CG2694 FBtr0070481|FBtr0070482|FBtr0310649 2717107|2717107|2717107 2717654|2717654|2717654 X + 2717194 2717288 3'utr CG2694 FlyBase G58487.1 AAAATGGAGCAGCCTCCAGTGAAAACGAACACGCTGTGACCTACTTTATATACCTACCTACATTTTATACAAACTTCTATAACCTGTACAATGGC 98 2717228 0.869808934 13 96 530 0.983870968 1.785329835 0 0.183673469 0.35483871 98 1 1 122 X:2717194-2717288 7 CG2694 FBtr0070482|FBtr0310649|FBtr0070481 2717107|2717107|2717107 2717654|2717654|2717654 GCTGTGA 7mer-A1 dme-miR-1008-3p X + 2717194 2717250 3'utr CG2694 FlyBase G44236.1 AAAATGGAGCAGCCTCCAGTGAAAACGAACACGCTGTGACCTACTTTATATACCTAC 65 2717228 0.878982731 8 61 325 0.965909091 1.62838893 0.022727273 0.261538462 0.454545455 65 2 1 85 X:2717194-2717250 7 76 3603 FBgn0024991 290.3333333 11.33666667 17.40333333 0.261768083 6.703910615 4.366979506 -2 -2 -2 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 2734792 2734797 - X_2734792_2734797_- 0.729951584 0.656723338 0.693337461 0.051780228 crm FBtr0070495|FBtr0070495|FBtr0070495|FBtr0070496|FBtr0070496|FBtr0070496 2734246|2734246|2734246|2734246|2734246|2734246 2735002|2735002|2735002|2735002|2735002|2735002 X - 2734715 2734817 3'utr crm FlyBase G64551.1 TATGTTTTTACGCGACTTTTTGTGATCTATACTCATTTTATGTATGCCAAGTATTAGCAAGCACTCACATTGTCTGAACATATATATTTATTTATACATTAAC 239 2734796 0.777182562 16 230 1811 0.967105263 1.62324929 0.381578947 0.217573222 0.384868421 239 4 6 294 X:2734715-2734817 6 crm FBtr0070495|FBtr0070495|FBtr0070495|FBtr0070496|FBtr0070496|FBtr0070496 2734246|2734246|2734246|2734246|2734246|2734246 2735002|2735002|2735002|2735002|2735002|2735002 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 2734779 2734816 3'utr crm FlyBase G48645.1 ATGTTTTTACGCGACTTTTTGTGATCTATACTCATTTT 108 2734796 0.648362768 10 108 942 1 2.176091259 0.806666667 0.314814815 0.506666667 108 0 0 150 X:2734779-2734816 6 115 3604 FBgn0000376 219.6566667 6.966666667 10.63 0.523544319 16.50717703 10.81843838 -1 -1 -1 0.2 dme-miR-283-5p 8mer-A1 TGATATTA X 2734865 2734872 - X_2734865_2734872_- 0.590967178 0.561966185 0.576466681 0.020506804 crm FBtr0070495|FBtr0070496 2734246|2734246 2735002|2735002 X - 2734840 2734898 3'utr crm FlyBase G64552.1 GTGTGCCTCCAAGCCTCATGTCCCACTGATATTACTCATTACTCACTCATCCCACCCAC 11 2734873 0.971848226 7 11 64 1 1.041392685 0.363636364 0 0 11 0 0 11 X:2734840-2734898 8 crm FBtr0070495|FBtr0070496 2734246|2734246 2735002|2735002 TGATATTA 8mer-A1 dme-miR-283-5p X - 2734838 2734873 3'utr crm FlyBase G48646.1 CTGATATTACTCATTACTCACTCATCCCACCCACCC 5 2734872 0.971902486 4 4 17 1 0.698970004 0.4 0 0 5 0 0 5 X:2734838-2734873 8 7 3605 FBgn0000376 219.6566667 6.966666667 10.63 0.031867915 1.004784689 0.658513641 1 0 0.5 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA X 2949079 2949086 + X_2949079_2949086_+ 0.609221301 0.616934918 0.613078109 0.005454339 CG3603 FBtr0332493 2948923 2949120 X + 2949060 2949098 3'utr CG3603 FlyBase G58505.1 AAGAGTAGGACCAGATTATTGCATTTACTTGTCAAGCCA 25 2949078 0.747567587 3 25 220 1 1.447158031 0.535714286 0.12 0.214285714 25 0 0 28 X:2949060-2949098 8 CG3603 FBtr0332493 2948923 2949120 TGCATTTA 8mer-A1 dme-miR-277-3p X + 2949060 2949092 3'utr CG3603 FlyBase G44249.1 AAGAGTAGGACCAGATTATTGCATTTACTTGTC 17 2949078 0.718231916 4 16 149 0.913043478 1.322219295 0.217391304 0.352941176 0.52173913 17 2 0 21 X:2949060-2949092 8 21 3606 FBgn0029648 25 3.55 5.413333333 0.84 5.915492958 3.879310345 1 1 1 0.2 dme-miR-308-3p 7mer-m1 TGTGATT X 3132826 3132832 + X_3132826_3132832_+ 0.521222997 0.521223707 0.521223352 4.95E-07 kirre FBtr0309501 3132424 3134532 X + 3132812 3132855 3'utr kirre FlyBase G58507.1 AACAAAAACCGTATTGTGATTTATAGCGTTAATTATTTTATGGC 25 3132825 0.743187544 4 23 264 0.928571429 1.414973348 0 0.12 0.214285714 25 2 0 26 X:3132812-3132855 7 kirre FBtr0309501 3132424 3134532 TGTGATT 7mer-m1 dme-miR-308-3p X + 3132815 3132847 3'utr kirre FlyBase G44251.1 AAAAACCGTATTGTGATTTATAGCGTTAATTAT 17 3132832 0.611854312 4 16 162 1 1.342422681 0.136363636 0.294117647 0.454545455 17 0 0 22 X:3132815-3132847 7 20.5 3607 FBgn0028369 20.34666667 0.466666667 0.723333333 1.007536042 43.92857143 28.34101382 1 -6 -2.5 0.2 dme-miR-988-3p 8mer-m1 ACAAGGGG X 3385571 3385578 + X_3385571_3385578_+ 0.625529443 0.627964753 0.626747098 0.001722088 dm FBtr0331605|FBtr0070525 3385311|3385311 3391697|3386011 X + 3385555 3385841 5'utr dm FlyBase G58551.1 TACCATACCATACCATACAAGGGGTTAGAGTTTACGAGTGATTTAACAAATTTGATTTCTTCAATGTGATATATATATGATTTTCTTTCCGCGCGATTTGATTTGGTAGGGAAAGGTTAACGAAAGCGGTTTTATGAAATCAATTTGAAGTGTTTTTTTTTCGCTGCATATATTACAATATACACGTATGGATTAGATTTAATTAACAATTAGCGGTCTGTATATAACATATGAAGTAGAATATCTTAATTATTTTTTTGAATTAGTTACTTAACCATGAAGTAAAC 664 3385570 0.977674322 62 611 4768 0.914540816 1.679427897 0.275510204 0.155120482 0.284438776 664 53 14 717 X:3385555-3385841 8 dm FBtr0331605|FBtr0070525 3385311|3385311 3391697|3386011 ACAAGGGG 8mer-m1 dme-miR-988-3p X + 3385555 3385714 5'utr dm FlyBase G44286.1 TACCATACCATACCATACAAGGGGTTAGAGTTTACGAGTGATTTAACAAATTTGATTTCTTCAATGTGATATATATATGATTTTCTTTCCGCGCGATTTGATTTGGTAGGGAAAGGTTAACGAAAGCGGTTTTATGAAATCAATTTGAAGTGTTTTTTTT 297 3385570 0.91509451 39 263 2207 0.891304348 1.567026366 0.20531401 0.32996633 0.519323671 297 36 9 369 X:3385555-3385714 8 282 3608 FBgn0262656 5210.653333 68.99333333 106.66 0.054119893 4.087351435 2.643915245 1 1 1 0.2 dme-miR-304-5p 6mer3-8 TGAGAT X 3386098 3386103 + X_3386098_3386103_+ 0.565618945 0.597728922 0.581673933 0.022705199 dm FBtr0331605 3385311 3391697 X + 3386051 3386137 3'utr dm FlyBase G58555.1 GAGCCACAAAGAGGAGATAGAGCACACAAAGTTGGGAGCGAGAACGATGAGATATATACTTATATAACATCTATATATCTATATATC 67 3386098 0.976643017 8 65 326 0.974683544 1.58546073 0.113924051 0.179104478 0.303797468 67 1 1 77 X:3386051-3386137 6 dm FBtr0331605 3385311 3391697 TGAGAT 6mer3-8 dme-miR-304-5p X + 3386042 3386119 3'utr dm FlyBase G44289.1 ACAACGAAGGAGCCACAAAGAGGAGATAGAGCACACAAAGTTGGGAGCGAGAACGATGAGATATATACTTATATAACA 53 3386098 0.959554018 9 50 226 0.96969697 1.806179974 0.090909091 0.20754717 0.363636364 53 2 0 64 X:3386042-3386119 6 50 3609 FBgn0262656 5210.653333 68.99333333 106.66 0.009595726 0.724707701 0.468779299 0 0 0 0.2 dme-miR-1008-3p 6mer3-8 AGCTGT X 3387014 3387019 + X_3387014_3387019_+ 0.572505694 0.583012427 0.577759061 0.007429359 dm FBtr0331605 3385311 3391697 X + 3386759 3387188 3'utr dm FlyBase G58557.2 ATATATTTTTTAACTGATAACTATGCATATGAAATGCGCAAAACTTAACGAAAACAAAACGGAATTAAGGAAACATTAAACTATATAATAGTGCTAAGCCGCGCCTAACCTCTCGAGATATATATAGTTAGGATGAGAGATAGGAAGAGTGTAGAAATTGGCTGCAAAGTTTGTGATTGGAGTTAAGAGAGGAGAGACCCAGAGAGAGATATATACACCCACGACCCAAGACCCAAGAAAACTCAAACTTTTGTGAGCTGTTTAACTGTCGATTTTTTGCTAATAAGTTATAGCCTTCCGGCGATATGTTATATATATATATATGTTATAACGATTCTACCAATTGTTTACACGCATCTAAGTATCAACTAAACTAAAAACTACTACTAAACTAATGGACATGAAGCATAAGGCAAATGCAAATGAAGTT 1579 3387033 0.918198984 82 1389 15981 0.884320175 1.67615545 0.270833333 0.132995567 0.249451754 1579 178 33 1613 X:3386759-3387188 6 dm FBtr0331605 3385311 3391697 AGCTGT 6mer3-8 dme-miR-1008-3p X + 3386817 3387087 3'utr dm FlyBase G44294.2 ACGGAATTAAGGAAACATTAAACTATATAATAGTGCTAAGCCGCGCCTAACCTCTCGAGATATATATAGTTAGGATGAGAGATAGGAAGAGTGTAGAAATTGGCTGCAAAGTTTGTGATTGGAGTTAAGAGAGGAGAGACCCAGAGAGAGATATATACACCCACGACCCAAGACCCAAGAAAACTCAAACTTTTGTGAGCTGTTTAACTGTCGATTTTTTGCTAATAAGTTATAGCCTTCCGGCGATATGTTATATATATATATATGTTAT 1147 3387033 0.992090859 53 1040 11654 0.912543153 1.768939419 0.284810127 0.380122058 0.590909091 1147 126 26 1586 X:3386817-3387087 6 822.5 3610 FBgn0262656 5210.653333 68.99333333 106.66 0.157849687 11.92144169 7.711419464 -19 -19 -19 0.2 dme-miR-968-5p 6mer3-8 ACTACT X 3388418 3388423 + X_3388418_3388423_+ 0.615645465 0.999094144 0.807369804 0.271139105 dm FBtr0331605 3385311 3391697 X + 3388402 3388450 3'utr dm FlyBase G58567.1 ATATACACACACACAAACTACTATTTGAATTAGTTGTTAAAAAATTTAT 7 3388424 0.987064162 5 7 57 1 0.954242509 0.222222222 0.285714286 0.444444444 7 0 0 9 X:3388402-3388450 6 dm FBtr0331605 3385311 3391697 ACTACT 6mer3-8 dme-miR-968-5p X + 3388362 3388442 3'utr dm FlyBase G44302.1 AGTTTAAATATATTTTTATGATTATCAAATTTTTTATATTATATACACACACACAAACTACTATTTGAATTAGTTGTTAAA 13 3388426 0.976669359 7 12 140 0.9375 1.176091259 0.1875 0.230769231 0.375 13 1 0 15 X:3388362-3388442 6 5.5 3611 FBgn0262656 5210.653333 68.99333333 106.66 0.00105553 0.079717847 0.051565723 -6 -8 -7 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 3388918 3388923 + X_3388918_3388923_+ 0.951429898 0.88696393 0.919196914 0.045584346 dm FBtr0331605 3385311 3391697 X + 3388891 3388962 3'utr dm FlyBase G58571.1 AAGTAAACACAATAAATTACATTTTATGTACCTTCTACATATATAAACTAAATATATTACACAGAACACACA 135 3388917 0.979817993 9 127 1467 0.945205479 2.139879086 0 0.074074074 0.143835616 135 8 0 138 X:3388891-3388962 6 dm FBtr0331605 3385311 3391697 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X + 3388885 3388948 3'utr dm FlyBase G44308.1 TGAGAAAAGTAAACACAATAAATTACATTTTATGTACCTTCTACATATATAAACTAAATATATT 83 3388917 0.992824373 11 76 891 0.923664122 1.480725379 0.022900763 0.481927711 0.671755725 83 7 3 121 X:3388885-3388948 6 105.5 3612 FBgn0262656 5210.653333 68.99333333 106.66 0.020246981 1.52913325 0.98912432 1 1 1 0.2 dme-miR-1012-3p 8mer-A1 TTGACTAA X 3489219 3489226 + X_3489219_3489226_+ 0.60066489 0.601230987 0.600947939 0.000400293 CG10803 FBtr0331612|FBtr0332285 3488215|3488215 3490915|3490915 X + 3489201 3489240 3'utr CG10803 FlyBase G58590.1 CGAGCAAACGCTACCAATTTGACTAAAATTAGTTAAGTGA 15 3489219 0.814163105 2 13 103 0.866666667 1.113943352 0.266666667 0 0 15 2 0 13 X:3489201-3489240 8 CG10803 FBtr0332285|FBtr0331612 3488215|3488215 3490915|3490915 TTGACTAA 8mer-A1 dme-miR-1012-3p X + 3489206 3489253 3'utr CG10803 FlyBase G44325.1 AAACGCTACCAATTTGACTAAAATTAGTTAAGTGAAATTATACTCAAA 13 3489219 0.984350701 4 11 82 0.9 0.954242509 0.15 0.384615385 0.6 13 1 1 18 X:3489206-3489253 8 12.5 3613 FBgn0029666 905.38 23.07666667 35.43666667 0.013806358 0.541672685 0.352741981 0 0 0 0.2 dme-miR-307a-3p 7mer-A1 GTTGTGA X 3489473 3489479 + X_3489473_3489479_+ 0.7622927 0.721630561 0.741961631 0.028752447 CG10803 FBtr0331612|FBtr0332285 3488215|3488215 3490915|3490915 X + 3489435 3489486 3'utr CG10803 FlyBase G58591.1 CTAACCAAATGTTTCCACACGCGTCTGTGAAGTAAACCGTTGTGATCGCTTT 7 3489474 0.978849824 3 7 49 1 0.84509804 0 0 0 7 0 0 7 X:3489435-3489486 7 CG10803 FBtr0332285|FBtr0331612 3488215|3488215 3490915|3490915 GTTGTGA 7mer-A1 dme-miR-307a-3p X + 3489443 3489485 3'utr CG10803 FlyBase G44326.1 ATGTTTCCACACGCGTCTGTGAAGTAAACCGTTGTGATCGCTT 11 3489474 0.98357939 4 9 69 0.823529412 0.84509804 0.117647059 0.545454545 0.705882353 11 2 1 14 X:3489443-3489485 7 8 3614 FBgn0029666 905.38 23.07666667 35.43666667 0.008836069 0.346670519 0.225754868 -1 -1 -1 0.2 dme-bantam-3p 7mer-m8 TGATCTC X 3508783 3508789 - X_3508783_3508789_- 0.659760373 0.656689772 0.658225073 0.002171242 CG32791 FBtr0333795 3507243 3513002 X - 3508763 3508805 3'utr CG32791 FlyBase G64593.1 TTTTTAATTAATTCATTGATCTCTTCTCACAAGGTTGGTTCTC 34 3508789 0.679050608 5 33 321 0.976190476 1.612783857 0 0.205882353 0.357142857 34 1 0 41 X:3508763-3508805 7 CG32791 FBtr0333795 3507243 3513002 TGATCTC 7mer-m8 dme-bantam-3p X - 3508763 3508805 3'utr CG32791 FlyBase G48671.1 TTTTTAATTAATTCATTGATCTCTTCTCACAAGGTTGGTTCTC 15 3508789 0.645855555 5 15 142 1 1.397940009 0 0.466666667 0.68 15 0 0 25 X:3508763-3508805 7 24.5 3615 FBgn0052791 287.9933333 6.18 9.406666667 0.085071414 3.964401294 2.60453579 0 0 0 0.2 dme-miR-277-3p 6mer3-8 TGCATT X 3705060 3705065 - X_3705060_3705065_- 0.517923842 0.812219571 0.665071706 0.208098556 Rala FBtr0070583|FBtr0070584|FBtr0070582 3704982|3704608|3704982 3707374|3707374|3706146 X - 3705037 3705075 3'utr Rala FlyBase G64618.1 TTTGTATAACTGCATTCTGTATTGTAATATTTAAGCTAT 10 3705061 0.780215803 5 10 111 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 X:3705037-3705075 6 Rala FBtr0070583|FBtr0070584|FBtr0070582 3704982|3704608|3704982 3707374|3707374|3706146 TGCATT 6mer3-8 dme-miR-277-3p X - 3705005 3705083 3'utr Rala FlyBase G48689.1 TGTTTACTTTTGTATAACTGCATTCTGTATTGTAATATTTAAGCTATTATTATTATGATAATTATTATTATTATTAAAT 13 3705060 0.99074505 7 13 144 1 1.361727836 0 0.461538462 0.695652174 13 0 0 23 X:3705005-3705083 6 10 3616 FBgn0015286 835.0366667 45.75666667 69.86666667 0.011975522 0.218547388 0.143129771 -4 -5 -4.5 0.2 dme-miR-965-3p 7mer-A1 ACGCTTA X 3705658 3705664 - X_3705658_3705664_- 0.723513874 0.620101546 0.67180771 0.073123609 Rala FBtr0070583|FBtr0070584|FBtr0070582 3704982|3704608|3704982 3707374|3707374|3706146 X - 3705639 3705683 3'utr Rala FlyBase G64620.1 AAACCTAAAGCTGAAGCTAACGCTTAAACATATTAAATATAATCA 6 3705666 0.940817106 2 6 31 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 X:3705639-3705683 7 Rala FBtr0070583|FBtr0070584|FBtr0070582 3704982|3704608|3704982 3707374|3707374|3706146 ACGCTTA 7mer-A1 dme-miR-965-3p X - 3705625 3705678 3'utr Rala FlyBase G48690.1 TAAAGCTGAAGCTAACGCTTAAACATATTAAATATAATCATCAATCGTAGACAA 5 3705666 0.938185392 3 5 22 1 0.77815125 0 0.2 0.333333333 5 0 0 6 X:3705625-3705678 7 5 3617 FBgn0015286 835.0366667 45.75666667 69.86666667 0.005987761 0.109273694 0.071564885 2 2 2 0.2 dme-bantam-3p 6mer3-8 TGATCT X 3706238 3706243 - X_3706238_3706243_- 0.995514736 0.999630654 0.997572695 0.002910452 Rala FBtr0070583|FBtr0070584 3704982|3704608 3707374|3707374 X - 3706216 3706253 intron-3'utr Rala FlyBase G64622.1 AGGTATTTTATGATCTAATCAGGGATATTTCATCGCGT 8 3706243 0.747518503 2 8 84 1 0.903089987 0.375 0 0 8 0 0 8 X:3706216-3706253 6 Rala FBtr0070583|FBtr0070584 3704982|3704608 3707374|3707374 TGATCT 6mer3-8 dme-bantam-3p X - 3706224 3706252 intron-3'utr Rala FlyBase G48692.1 GGTATTTTATGATCTAATCAGGGATATTT 5 3706244 0.963311441 3 5 40 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 X:3706224-3706252 6 6.5 3618 FBgn0015286 835.0366667 45.75666667 69.86666667 0.007784089 0.142055802 0.093034351 0 1 0.5 0.2 dme-miR-308-3p 7mer-m1 TGTGATT X 3787057 3787063 + X_3787057_3787063_+ 0.521186706 0.507439181 0.514312943 0.00972095 tlk FBtr0299581|FBtr0070596|FBtr0333753|FBtr0299582|FBtr0299580|FBtr0299579|FBtr0333751 3786403|3786403|3786403|3786403|3786403|3786403|3786403 3787977|3787977|3789770|3787977|3788818|3787977|3789770 X + 3787030 3787139 3'utr tlk FlyBase G58647.1 AACAAATTATTGCATTATCTGCTGGATTGTGATTGTGGTTCAAACATTAAAAATACACTTACTCATACACACAAGGTAGACACTGCAGACTAATTTTGCCTTAAAAGAAA 58 3787062 0.98275765 15 54 495 0.945945946 1.84509804 0.175675676 0.172413793 0.351351351 58 4 0 70 X:3787030-3787139 7 tlk FBtr0333751|FBtr0299582|FBtr0299580|FBtr0299579|FBtr0070596|FBtr0333753|FBtr0299581 3786403|3786403|3786403|3786403|3786403|3786403|3786403 3789770|3787977|3788818|3787977|3787977|3789770|3787977 TGTGATT 7mer-m1 dme-miR-308-3p X + 3787029 3787077 3'utr tlk FlyBase G44367.1 TAACAAATTATTGCATTATCTGCTGGATTGTGATTGTGGTTCAAACATT 38 3787063 0.80106654 9 35 391 0.915254237 1.431363764 0.203389831 0.421052632 0.627118644 38 4 1 54 X:3787029-3787077 7 37 3619 FBgn0086899 3401.553333 62.96 97.16333333 0.010877383 0.587674714 0.380802086 -5 -6 -5.5 0.2 dme-miR-14-3p 8mer-A1 AAGACTGA X 3791691 3791698 + X_3791691_3791698_+ 0.599641463 0.616217663 0.607929563 0.011721143 HIP-R FBtr0070597|FBtr0333764|FBtr0070598 3791667|3791667|3791667 3792477|3792477|3792477 X + 3791616 3791710 stop_codon HIP-R FlyBase G58657.1 AGCCTAAGCCTAAAAAGGACTCCGCCGACTTCGTCGATGACGGTTTGGACTAAGGTTTAGAAATGGGGCAGTAGTAAGACTGAAACATGCGTCGA 131 3791690 0.774859864 7 111 444 0.854304636 1.508529719 0.046357616 0.13740458 0.251655629 131 19 3 129 X:3791616-3791710 8 HIP-R FBtr0070598|FBtr0333764|FBtr0070597 3791667|3791667|3791667 3792477|3792477|3792477 AAGACTGA 8mer-A1 dme-miR-14-3p X + 3791656 3791725 stop_codon HIP-R FlyBase G44375.1 CGGTTTGGACTAAGGTTTAGAAATGGGGCAGTAGTAAGACTGAAACATGCGTCGATAAAAAGAAGTTAAC 91 3791690 0.929287388 6 81 304 0.905511811 1.759667845 0.023622047 0.274725275 0.480314961 91 11 1 115 X:3791656-3791725 8 104 3620 FBgn0029676 2406.406667 147.0733333 226.7733333 0.043217965 0.70713023 0.458607714 1 1 1 0.2 dme-miR-14-3p 8mer-A1 AAGACTGA X 3800774 3800781 + X_3800774_3800781_+ 0.600521839 0.607634477 0.604078158 0.005029438 HIP FBtr0070600 3800750 3801570 X + 3800738 3800796 stop_codon HIP FlyBase G58667.1 ACGGTTTGGACTAAGGTTTAGAAATGGGGCAGTAGTAAGACTGAAACATGCGTCGATAA 135 3800773 0.919593036 4 128 441 0.947976879 2.214843848 0 0.22962963 0.398843931 135 9 0 164 X:3800738-3800796 8 HIP FBtr0070600 3800750 3801570 AAGACTGA 8mer-A1 dme-miR-14-3p X + 3800739 3800793 stop_codon HIP FlyBase G44380.1 CGGTTTGGACTAAGGTTTAGAAATGGGGCAGTAGTAAGACTGAAACATGCGTCGA 83 3800773 0.912816725 5 77 256 0.959016393 1.767155866 0 0.34939759 0.557377049 83 4 1 117 X:3800739-3800793 8 107 3621 FBgn0260484 933.6966667 55.94 86.52333333 0.114598246 1.912763675 1.236660631 1 1 1 0.2 dme-miR-92b-3p 6mer3-8 GTGCAA X 3856620 3856625 + X_3856620_3856625_+ 0.641695802 0.571255821 0.606475811 0.049808602 ec FBtr0112801|FBtr0070606|FBtr0112802 3856584|3856584|3856584 3857621|3857621|3857621 X + 3856544 3856789 stop_codon ec FlyBase G58686.1 AACTGCGAGTACTACCTGCAGATGCTGAACCAGCGCAGATGATGATGATTCGACACTCGACCATCGACCATCTCTAGTGCAACTTTCTAGCCGTACATGGAACCCGTTAATCTCAAGCATTAAAATGCTGCCACGTCGCCAATAAGGAGCCGCCAAGGATGTACATAGCATGCTTACAAATACATAGATAGGTGTAAGGATATAAAGTGGTGCCAGCTAACAGGCGAATTGCATGGACCCGGACTC 191 3856628 0.970774783 25 181 1041 0.938016529 1.878904602 0.123966942 0.204188482 0.371900826 191 13 2 227 X:3856544-3856789 6 ec FBtr0112802|FBtr0112801|FBtr0070606 3856584|3856584|3856584 3857621|3857621|3857621 GTGCAA 6mer3-8 dme-miR-92b-3p X + 3856594 3856715 3'utr ec FlyBase G44391.1 CGACACTCGACCATCGACCATCTCTAGTGCAACTTTCTAGCCGTACATGGAACCCGTTAATCTCAAGCATTAAAATGCTGCCACGTCGCCAATAAGGAGCCGCCAAGGATGTACATAGCATG 133 3856628 0.932940516 14 124 696 0.935960591 1.801632346 0.108374384 0.406015038 0.610837438 133 11 2 190 X:3856594-3856715 6 81 3622 FBgn0000542 46.02 0.82 1.256666667 1.760104302 98.7804878 64.45623342 -8 -8 -8 0.2 dme-miR-1007-3p 7mer-m8 TGAGCTT X 3857276 3857282 + X_3857276_3857282_+ 0.620162645 0.486739426 0.553451036 0.094344449 ec FBtr0112801|FBtr0070606|FBtr0112802 3856584|3856584|3856584 3857621|3857621|3857621 X + 3857128 3857322 3'utr ec FlyBase G58688.1 ACCCAAAGCCTGACCAGTCGTCCGCCTCCATAAACCACATTAGTGCTTTTTGTTTCGACATCGAATTTTATTTACATTTTTTTACCTAAGCTAACTAAATACGATTTATTTCTCTGTGTGAGACGCCAGCAGTTTGAAACTTGGTCGTTGAGCTTCCTTGTGCGTGCTGTTGTCCAACGACACTCGCACTTCCAT 55 3857276 0.986226984 26 54 447 0.984126984 1.792391689 0.206349206 0.109090909 0.222222222 55 1 0 62 X:3857128-3857322 7 ec FBtr0112802|FBtr0112801|FBtr0070606 3856584|3856584|3856584 3857621|3857621|3857621 TGAGCTT 7mer-m8 dme-miR-1007-3p X + 3857263 3857303 3'utr ec FlyBase G44395.1 GAAACTTGGTCGTTGAGCTTCCTTGTGCGTGCTGTTGTCCA 31 3857285 0.703249831 6 28 295 0.913043478 1.322219295 0.304347826 0.322580645 0.543478261 31 3 1 42 X:3857263-3857303 7 24.5 3623 FBgn0000542 46.02 0.82 1.256666667 0.532377227 29.87804878 19.49602122 0 -9 -4.5 0.2 dme-miR-190-5p 6mer3-8 ACATAT X 3939838 3939843 + X_3939838_3939843_+ 0.822084381 0.770611637 0.796348009 0.036396766 CG2941 FBtr0070613|FBtr0345711 3939668|3939668 3940006|3940582 X + 3939807 3939860 3'utr CG2941 FlyBase G58719.1 TGTCCTTTAAAAGGATGACTGTATGCACATAACATATGTACTACTGCCTTGCAA 14 3939843 0.978329834 3 14 99 1 1.255272505 0.166666667 0.214285714 0.388888889 14 0 0 18 X:3939807-3939860 6 CG2941 FBtr0070613|FBtr0345711 3939668|3939668 3940006|3940582 ACATAT 6mer3-8 dme-miR-190-5p X + 3939817 3939860 3'utr CG2941 FlyBase G44420.1 AAGGATGACTGTATGCACATAACATATGTACTACTGCCTTGCAA 10 3939843 0.975294405 2 10 66 1 1.079181246 0.083333333 0.2 0.333333333 10 0 0 12 X:3939817-3939860 6 11 3624 FBgn0029686 285.74 9.48 14.62333333 0.038496535 1.160337553 0.752222475 -5 -5 -5 0.2 dme-miR-1012-3p 7mer-A1 TGACTAA X 3953149 3953155 + X_3953149_3953155_+ 0.823251605 0.821770251 0.822510928 0.001047437 Vap-33A FBtr0070618|FBtr0342739|FBtr0070617|FBtr0070616 3952921|3952921|3952921|3952921 3955442|3955442|3954086|3954086 X + 3953125 3953206 3'utr Vap-33A FlyBase G58731.1 AAACCACAGAGACGAATGTAAAGCTGACTAAACCGGGGACCGTATACATTTAAACGGTTGTATTGAAAATCAAAAATAATCA 19 3953149 0.930710976 6 18 69 0.95 0.977723605 0.1 0.052631579 0.1 19 0 1 19 X:3953125-3953206 7 Vap-33A FBtr0070616|FBtr0070617|FBtr0342739|FBtr0070618 3952921|3952921|3952921|3952921 3954086|3954086|3955442|3955442 TGACTAA 7mer-A1 dme-miR-1012-3p X + 3953131 3953176 3'utr Vap-33A FlyBase G44430.1 CAGAGACGAATGTAAAGCTGACTAAACCGGGGACCGTATACATTTA 9 3953149 0.941309821 4 6 24 0.8125 1.113943352 0.25 0.625 0.8125 8 3 0 13 X:3953131-3953176 7 12 3625 FBgn0029687 3606.676667 166.3933333 255.1133333 0.003327163 0.072118274 0.047037918 0 0 0 0.2 dme-miR-965-3p 6mer2-7 ACGCTT X 3953375 3953380 + X_3953375_3953380_+ 0.454957589 0.57822151 0.516589549 0.08716074 Vap-33A FBtr0070618|FBtr0342739|FBtr0070617|FBtr0070616 3952921|3952921|3952921|3952921 3955442|3955442|3954086|3954086 X + 3953362 3953393 3'utr Vap-33A FlyBase G58732.1 TTAAGCTGTATTGACGCTTCGTGTATTTCAAC 6 3953372 0.865413597 5 6 40 1 0.77815125 0.666666667 0 0 6 0 0 6 X:3953362-3953393 6 Vap-33A FBtr0070616|FBtr0070617|FBtr0342739|FBtr0070618 3952921|3952921|3952921|3952921 3954086|3954086|3955442|3955442 ACGCTT 6mer2-7 dme-miR-965-3p X + 3953361 3953394 3'utr Vap-33A FlyBase G44431.1 TTTAAGCTGTATTGACGCTTCGTGTATTTCAACC 7 3953372 0.730922732 3 7 53 1 1.079181246 0.5 0.428571429 0.666666667 7 0 0 12 X:3953361-3953394 6 6 3626 FBgn0029687 3606.676667 166.3933333 255.1133333 0.001663581 0.036059137 0.023518959 3 3 3 0.2 dme-miR-277-3p 7mer-m8 TGCATTT X 3953705 3953711 + X_3953705_3953711_+ 0.599364913 0.594958683 0.597161798 0.003115654 Vap-33A FBtr0070618|FBtr0342739|FBtr0070617|FBtr0070616 3952921|3952921|3952921|3952921 3955442|3955442|3954086|3954086 X + 3953689 3953727 3'utr Vap-33A FlyBase G58734.1 TGCTCAGATTTTCGATTGCATTTTTTCGCTATTATTAAT 11 3953704 0.812998988 2 11 138 1 1.113943352 0.153846154 0.181818182 0.307692308 11 0 0 13 X:3953689-3953727 7 Vap-33A FBtr0070616|FBtr0070617|FBtr0342739|FBtr0070618 3952921|3952921|3952921|3952921 3954086|3954086|3955442|3955442 TGCATTT 7mer-m8 dme-miR-277-3p X + 3953689 3953730 3'utr Vap-33A FlyBase G44433.1 TGCTCAGATTTTCGATTGCATTTTTTCGCTATTATTAATTTG 8 3953704 0.763923886 4 8 92 1 0.954242509 0.444444444 0.125 0.222222222 8 0 0 9 X:3953689-3953730 7 9 3627 FBgn0029687 3606.676667 166.3933333 255.1133333 0.002495372 0.054088705 0.035278438 1 1 1 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA X 3954292 3954299 + X_3954292_3954299_+ 0.6222927 0.619643982 0.620968341 0.001872914 Vap-33A FBtr0070618|FBtr0342739 3952921|3952921 3955442|3955442 X + 3954231 3954312 3'utr Vap-33A FlyBase G58735.1 CGCGGACGGCGGCTCTATATATACATATTTATATATAATCATTATTGTTTTGGTTGGCATTTGCATTTACTAAGTTTCGTTT 28 3954291 0.987945231 6 28 331 1 1.531478917 0.117647059 0.214285714 0.352941176 28 0 0 34 X:3954231-3954312 8 Vap-33A FBtr0342739|FBtr0070618 3952921|3952921 3955442|3955442 TGCATTTA 8mer-A1 dme-miR-277-3p X + 3954274 3954311 3'utr Vap-33A FlyBase G44434.1 ATTGTTTTGGTTGGCATTTGCATTTACTAAGTTTCGTT 10 3954291 0.7814271 3 10 113 1 1.113943352 0 0.3 0.461538462 10 0 0 13 X:3954274-3954311 8 17 3628 FBgn0029687 3606.676667 166.3933333 255.1133333 0.00471348 0.102167555 0.06663705 1 1 1 0.2 dme-miR-252-5p 6mer3-8 GTACTT X 3955039 3955044 + X_3955039_3955044_+ 0.966009049 0.999912492 0.98296077 0.023973395 Vap-33A FBtr0070618|FBtr0342739 3952921|3952921 3955442|3955442 X + 3955029 3955061 3'utr Vap-33A FlyBase G58738.1 TAAGCAAATTGTACTTGATGTCAGCTGTAGCAA 5 3955038 0.782655238 2 5 33 1 0.84509804 0 0.4 0.571428571 5 0 0 7 X:3955029-3955061 6 Vap-33A FBtr0342739|FBtr0070618 3952921|3952921 3955442|3955442 GTACTT 6mer3-8 dme-miR-252-5p X + 3955030 3955056 3'utr Vap-33A FlyBase G44435.1 AAGCAAATTGTACTTGATGTCAGCTGT 7 3955039 0.676958841 3 7 47 1 1.041392685 0.545454545 0.428571429 0.636363636 7 0 0 11 X:3955030-3955056 6 5.5 3629 FBgn0029687 3606.676667 166.3933333 255.1133333 0.00152495 0.033054209 0.021559046 1 0 0.5 0.2 dme-miR-1006-3p 6mer2-7 GAATTT X 4098114 4098119 - X_4098114_4098119_- 0.959676403 0.877523069 0.918599736 0.058091156 CG6379 FBtr0343297|FBtr0070671 4097590|4097916 4098173|4098173 X - 4098104 4098143 3'utr CG6379 FlyBase G64690.1 AACTATACATAAGGATACATATGTGAATTTCCTTTTTTTT 12 4098116 0.782979903 6 10 102 0.846153846 1.041392685 0 0.083333333 0.153846154 12 2 0 11 X:4098104-4098143 6 CG6379 FBtr0343297|FBtr0070671 4097590|4097916 4098173|4098173 GAATTT 6mer2-7 dme-miR-1006-3p X - 4098110 4098137 3'utr CG6379 FlyBase G48744.1 ACATAAGGATACATATGTGAATTTCCTT 6 4098115 0.783096857 3 6 43 1 1 0.3 0.333333333 0.6 6 0 0 10 X:4098110-4098137 6 9 3630 FBgn0029693 315.06 11.47 17.60333333 0.028565987 0.784655623 0.511266806 -3 -4 -3.5 0.2 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA X 4105606 4105613 + X_4105606_4105613_+ 0.529297044 0.532312919 0.530804982 0.002132563 brn FBtr0070638 4105462 4105791 X + 4105551 4105634 3'utr brn FlyBase G58739.1 ATTAGGAGCAGTGGATGATACCTCAACCGTTCAGTGAGACTTTAAACCAAGCAGCTGGTGCTAATAGTGCAAGATCGCAAGAGT 25 4105615 0.974113365 6 22 132 0.888888889 1.380211242 0.148148148 0.125 0.222222222 24 3 0 24 X:4105551-4105634 8 brn FBtr0070638 4105462 4105791 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" X + 4105554 4105627 3'utr brn FlyBase G44436.1 AGGAGCAGTGGATGATACCTCAACCGTTCAGTGAGACTTTAAACCAAGCAGCTGGTGCTAATAGTGCAAGATCG 16 4105592 0.968687245 6 14 77 0.904761905 0.977723605 0.142857143 0.25 0.428571429 16 1 1 19 X:4105554-4105627 8 11 3631 FBgn0000221 55.33333333 4.63 7.023333333 0.198795181 2.375809935 1.566207879 -9 14 2.5 0.2 dme-bantam-3p 8mer-A1 TGATCTCA X 4115169 4115176 - X_4115169_4115176_- 0.603748034 0.539154452 0.571451243 0.045674502 Tip60 FBtr0333185 4114798 4115309 X - 4115113 4115189 5'utr Tip60 FlyBase G64713.1 AAAAAAGAGGACGTGATCTCAACGCTGCAGAACCTGAACCTGATCAACTACTACAAGGGCCAGTACATCGTGTGCAT 41 4115176 0.92780075 9 38 137 0.9375 1.352182518 0.166666667 0.146341463 0.270833333 41 2 1 45 X:4115113-4115189 8 Tip60 FBtr0333185 4114798 4115309 TGATCTCA 8mer-A1 dme-bantam-3p X - 4115128 4115189 5'utr Tip60 FlyBase G48758.1 AAAAAAGAGGACGTGATCTCAACGCTGCAGAACCTGAACCTGATCAACTACTACAAGGGCCA 16 4115176 0.952559721 3 15 50 0.964285714 1.431363764 0.178571429 0.5625 0.75 16 1 0 27 X:4115128-4115189 8 17 3632 FBgn0026080 257.65 13.78333333 21.11666667 0.065980982 1.23337364 0.805051302 0 0 0 0.2 dme-miR-965-3p 7mer-m8 TACGCTT X 4126243 4126249 + X_4126243_4126249_+ 0.619706101 0.39198291 0.505844506 0.161024619 tyf FBtr0301124|FBtr0345713|FBtr0305179|FBtr0305180|FBtr0070643|FBtr0305184|FBtr0305183|FBtr0305185 4125993|4125993|4125993|4125993|4125993|4125993|4125993|4125993 4128947|4130016|4128947|4128947|4126742|4128947|4128947|4126742 X + 4126230 4126297 3'utr tyf FlyBase G58758.1 ATTGCAATAATGATACGCTTTAATGCTAATTAATGTAACGAGTCGATAGCCGAACTATTGATTAACTT 11 4126243 0.853841916 5 11 76 1 1.146128036 0 0.272727273 0.428571429 11 0 0 14 X:4126230-4126297 7 tyf FBtr0305183|FBtr0305185|FBtr0070643|FBtr0305184|FBtr0305179|FBtr0305180|FBtr0301124|FBtr0345713 4125993|4125993|4125993|4125993|4125993|4125993|4125993|4125993 4128947|4126742|4126742|4128947|4128947|4128947|4128947|4130016 TACGCTT 7mer-m8 dme-miR-965-3p X + 4126190 4126293 3'utr tyf FlyBase G44450.1 TGTTTATATATCTACCGATATCGTACACACACTATATATTATTGCAATAATGATACGCTTTAATGCTAATTAATGTAACGAGTCGATAGCCGAACTATTGATTA 12 4126244 0.981882681 10 12 83 1 1.255272505 0.111111111 0.416666667 0.611111111 12 0 0 18 X:4126190-4126293 7 5 3633 FBgn0026083 3003.736667 42.11 64.35333333 0.001664593 0.118736642 0.077696053 0 -1 -0.5 0.2 dme-miR-317-3p 6mer3-8 TGTGTT X 4126872 4126877 + X_4126872_4126877_+ 0.700801716 0.80393775 0.752369733 0.072928236 tyf FBtr0301124|FBtr0345713|FBtr0305179|FBtr0305180|FBtr0305184|FBtr0305183 4125993|4125993|4125993|4125993|4125993|4125993 4128947|4130016|4128947|4128947|4128947|4128947 X + 4126771 4126883 3'utr tyf FlyBase G58762.1 TTTGGGCGCGTTGTTTGGAGGAAATCCTAATCCTAGATATTAAACCGAGTCAACGTCGCGTGTACATAGTGGACCAGAAGTCGTGTGGGCAGTTCGATCTCTGTGTTATGGAT 37 4126872 0.978892241 10 37 255 1 1.633468456 0.511627907 0.135135135 0.255813953 37 0 0 43 X:4126771-4126883 6 tyf FBtr0305183|FBtr0305184|FBtr0305179|FBtr0305180|FBtr0301124|FBtr0345713 4125993|4125993|4125993|4125993|4125993|4125993 4128947|4128947|4128947|4128947|4128947|4130016 TGTGTT 6mer3-8 dme-miR-317-3p X + 4126838 4126884 3'utr tyf FlyBase G44452.1 AGTGGACCAGAAGTCGTGTGGGCAGTTCGATCTCTGTGTTATGGATT 21 4126872 0.723513697 4 21 177 1 1.531478917 0.676470588 0.380952381 0.617647059 21 0 0 34 X:4126838-4126884 6 23.5 3634 FBgn0026083 3003.736667 42.11 64.35333333 0.007823589 0.558062218 0.365171449 0 0 0 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC X 4132323 4132329 + X_4132323_4132329_+ 0.526301606 0.496994869 0.511648237 0.020722966 GlcAT-I FBtr0070644 4132268 4132833 X + 4132240 4132359 stop_codon GlcAT-I FlyBase G58771.1 CAGCGATCCGATGGCGGCATGGAGGTCTAACCCGGGACCTAATTGTATATATAGCAAACTATCATCCTAGTGAATTTACTTAATGTGTTCCGTCTCCTCATAGTTTAGCCCCAATTTATT 99 4132327 0.990482047 16 89 903 0.903508772 2.012837225 0.043859649 0.121212121 0.236842105 99 11 0 103 X:4132240-4132359 7 GlcAT-I FBtr0070644 4132268 4132833 TGTGTTC 7mer-m8 dme-miR-317-3p X + 4132283 4132354 3'utr GlcAT-I FlyBase G44458.1 TGTATATATAGCAAACTATCATCCTAGTGAATTTACTTAATGTGTTCCGTCTCCTCATAGTTTAGCCCCAAT 61 4132327 0.989215843 10 56 543 0.927710843 1.886490725 0.024096386 0.278688525 0.469879518 61 6 0 77 X:4132283-4132354 7 66.5 3635 FBgn0066114 187.3333333 14.82333333 22.83333333 0.354982206 4.486170452 2.912408759 -4 -4 -4 0.2 dme-miR-305-3p 6mer2-7 TGTGCC X 4132786 4132791 + X_4132786_4132791_+ 0.995837945 0.995311493 0.995574719 0.000372221 GlcAT-I FBtr0070644 4132268 4132833 X + 4132747 4132800 3'utr GlcAT-I FlyBase G58774.1 TGGAGATTAGTTACATTAGATATACATAAGCTTCCCCTGTGTGCCTCCCAATTG 16 4132786 0.777590729 6 16 112 1 1.301029996 0.25 0.25 0.4 16 0 0 20 X:4132747-4132800 6 GlcAT-I FBtr0070644 4132268 4132833 TGTGCC 6mer2-7 dme-miR-305-3p X + 4132731 4132808 3'utr GlcAT-I FlyBase G44459.1 AGGTTTTGCAAATTGTTGGAGATTAGTTACATTAGATATACATAAGCTTCCCCTGTGTGCCTCCCAATTGACGCAAAT 16 4132787 0.693920892 8 15 132 0.96 1.380211242 0.12 0.375 0.6 16 1 0 24 X:4132731-4132808 6 11.5 3636 FBgn0066114 187.3333333 14.82333333 22.83333333 0.0613879 0.775803913 0.503649635 0 -1 -0.5 0.2 dme-miR-1012-3p 6mer3-8 TTGACT X 4371034 4371039 + X_4371034_4371039_+ 0.99813773 0.999363073 0.998750401 0.000866489 CG3626 FBtr0070652 4370341 4371136 X + 4371017 4371066 3'utr CG3626 FlyBase G58804.1 TTTACTAACCCAGACGATTGACTTTGTAATTTATGGTGTGCTACTGTGTG 23 4371034 0.897441426 4 23 166 1 1.447158031 0.142857143 0.173913043 0.321428571 23 0 0 28 X:4371017-4371066 6 CG3626 FBtr0070652 4370341 4371136 TTGACT 6mer3-8 dme-miR-1012-3p X + 4371017 4371050 3'utr CG3626 FlyBase G44477.1 TTTACTAACCCAGACGATTGACTTTGTAATTTAT 18 4371035 0.751307921 3 17 122 0.95 1.278753601 0.05 0.111111111 0.2 18 1 0 19 X:4371017-4371050 6 20 3637 FBgn0029706 385.3333333 12.31666667 18.87333333 0.051903114 1.623815968 1.05969622 0 -1 -0.5 0.2 dme-miR-999-3p 6mer3-8 AGTTAA X 4553219 4553224 - X_4553219_4553224_- 0.903448345 0.98178058 0.942614462 0.055389301 CG11444 FBtr0070698|FBtr0343567 4553115|4553115 4553334|4553334 X - 4553213 4553246 3'utr CG11444 FlyBase G64747.1 CCTTTTGATGAACAGTGCAATTAGTTAAGCATAA 8 4553225 0.719776927 3 8 52 1 0.954242509 0.333333333 0.125 0.222222222 8 0 0 9 X:4553213-4553246 6 CG11444 FBtr0343567|FBtr0070698 4553115|4553115 4553334|4553334 AGTTAA 6mer3-8 dme-miR-999-3p X - 4553213 4553244 3'utr CG11444 FlyBase G48780.1 TTTTGATGAACAGTGCAATTAGTTAAGCATAA 5 4553225 0.727206407 3 5 36 1 0.903089987 0.25 0.4 0.625 5 0 0 8 X:4553213-4553244 6 6.5 3638 FBgn0029715 690.7566667 79.31666667 121.3466667 0.009409971 0.081949989 0.053565542 1 1 1 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 4638847 4638853 + X_4638847_4638853_+ 0.823166111 0.719220516 0.771193313 0.073500639 pon FBtr0070681 4638658 4639112 X + 4638831 4638859 3'utr pon FlyBase G58824.1 AAGTTTTTAATTGCACCCAAAGATTGTCA 5 4638842 0.7899537 3 5 27 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 X:4638831-4638859 7 pon FBtr0070681 4638658 4639112 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X + 4638813 4638861 3'utr pon FlyBase G44489.1 ATTTTTCAGCACCTAGTTAAGTTTTTAATTGCACCCAAAGATTGTCACA 8 4638854 0.985595571 4 5 48 0.5 0.84509804 0.357142857 0.25 0.571428571 8 7 0 7 X:4638813-4638861 7 6 3639 FBgn0025739 591.8333333 27.75666667 42.74666667 0.010137989 0.216164285 0.140361822 5 -7 -1 0.2 dme-miR-305-5p 8mer-A1 AGTACAAA X 4680590 4680597 - X_4680590_4680597_- 0.430865397 0.56634166 0.498603529 0.09579621 Pp2C1 FBtr0070685|FBtr0343531 4680402|4679986 4680631|4680631 X - 4680546 4680623 3'utr Pp2C1 FlyBase G64769.1 GTAACGAAACATGCGAGCAACTTGCAAGTACAAATCCTAAGCAACGGAAAATTTTAGATCCTAGTATACTACTTTACT 81 4680601 0.756303164 10 71 386 0.887640449 1.596597096 0.247191011 0.098765432 0.179775281 81 9 1 79 X:4680546-4680623 8 Pp2C1 FBtr0343531 4679986 4680631 AGTACAAA 8mer-A1 dme-miR-305-5p X - 4680539 4680645 stop_codon Pp2C1 FlyBase G48791.1 CGCGAAGGCGCTAGGCTAGATTGTAACGAAACATGCGAGCAACTTGCAAGTACAAATCCTAAGCAACGGAAAATTTTAGATCCTAGTATACTACTTTACTGAAAACG 54 4680601 0.956473552 11 50 241 0.855421687 1.851258349 0.277108434 0.425925926 0.626506024 54 12 0 71 X:4680539-4680645 8 58 3640 FBgn0022768 1391.28 29.69333333 45.54 0.04168823 1.953300404 1.273605621 4 4 4 0.2 dme-miR-2a-2-5p 6mer3-8 TGATGA X 4698733 4698738 + X_4698733_4698738_+ 0.997821494 0.999965703 0.998893599 0.001516178 ctp FBtr0070707|FBtr0070704|FBtr0070706|FBtr0307065 4698457|4698457|4698457|4698457 4702034|4699456|4699456|4702034 X + 4698695 4698742 3'utr ctp FlyBase G58846.1 ACTACAACCACCAGTAGAACATCTCAAGGATGCGGAAATGATGACCGA 6 4698733 0.914335817 3 6 20 1 0.77815125 0.333333333 0 0 6 0 0 6 X:4698695-4698742 6 ctp FBtr0070706|FBtr0307065|FBtr0070707|FBtr0070704 4698457|4698457|4698457|4698457 4699456|4702034|4702034|4699456 TGATGA 6mer3-8 dme-miR-2a-2-5p X + 4698691 4698742 3'utr ctp FlyBase G44504.1 AAACACTACAACCACCAGTAGAACATCTCAAGGATGCGGAAATGATGACCGA 10 4698725 0.929377927 6 8 31 0.909090909 1 0.272727273 0.1 0.181818182 10 1 0 10 X:4698691-4698742 6 4.5 3641 FBgn0011760 8034.93 648.8766667 999.3333333 0.000560055 0.006935062 0.004503002 0 8 4 0.2 dme-miR-190-5p 6mer3-8 ACATAT X 4699410 4699415 + X_4699410_4699415_+ 0.849167772 0.555486828 0.7023273 0.207663827 ctp FBtr0070707|FBtr0070704|FBtr0070706|FBtr0307065 4698457|4698457|4698457|4698457 4702034|4699456|4699456|4702034 X + 4699368 4699429 3'utr ctp FlyBase G58851.1 CAAATGTTTTATGTGCTGGAGCTTTGTTTGGACTTTTGATTTACATATGAAACCTGCGCAAT 20 4699404 0.659604972 8 18 219 0.965517241 1.447158031 0.344827586 0.25 0.482758621 20 1 0 28 X:4699368-4699429 6 ctp FBtr0070706|FBtr0307065|FBtr0070707|FBtr0070704 4698457|4698457|4698457|4698457 4699456|4702034|4702034|4699456 ACATAT 6mer3-8 dme-miR-190-5p X + 4699369 4699453 3'utr ctp FlyBase G44508.2 AAATGTTTTATGTGCTGGAGCTTTGTTTGGACTTTTGATTTACATATGAAACCTGCGCAATTAAACAATTGTTAACAAGAAAAGA 15 4699403 0.95902528 9 13 116 0.791666667 0.801632346 0 0.533333333 0.708333333 15 3 2 19 X:4699369-4699453 6 5 3642 FBgn0011760 8034.93 648.8766667 999.3333333 0.000622283 0.007705625 0.005003336 6 7 6.5 0.2 dme-miR-283-5p 7mer-A1 GATATTA X 4705047 4705053 + X_4705047_4705053_+ 0.539679301 0.779958305 0.659818803 0.16990291 l(1)G0334 FBtr0070709|FBtr0070711|FBtr0070708|FBtr0070710 4704769|4704769|4704769|4704769 4705123|4705265|4705123|4705123 X + 4705028 4705110 3'utr l(1)G0334 FlyBase G58859.1 ACTCTGGGGTACTGCATTGGATATTATATTGCGAACGTGTTCAATAAGGATAAAGCGAGGTGTAAATTGTTGAAAATATAAAA 14 4705072 0.981481815 8 10 105 0.75 0.77815125 0.1875 0.142857143 0.25 14 3 1 12 X:4705028-4705110 7 l(1)G0334 FBtr0070710|FBtr0070708|FBtr0070711|FBtr0070709 4704769|4704769|4704769|4704769 4705123|4705123|4705265|4705123 GATATTA 7mer-A1 dme-miR-283-5p X + 4705017 4705075 3'utr l(1)G0334 FlyBase G44516.1 CGCACCACATAACTCTGGGGTACTGCATTGGATATTATATTGCGAACGTGTTCAATAAG 9 4705044 0.978292364 4 8 56 0.9 0.954242509 0.1 0.111111111 0.2 9 1 0 9 X:4705017-4705075 7 6 3643 FBgn0028325 2302.306667 161.7833333 248.5566667 0.002606082 0.037086639 0.024139365 -25 3 -11 0.2 dme-bantam-3p 6mer3-8 TGATCT X 482668 482673 + X_482668_482673_+ 0.999997968 0.999463437 0.999730702 0.000378019 CG3176 FBtr0336920|FBtr0343501 482436|482580 482768|482768 X + 482623 482697 3'utr CG3176 FlyBase G57740.1 AAAGAATATAGAGCTATATAGTATTTAACATTAGGCAAAAATCTTTGATCTATTCTTCGTTAGCGCTGTGCGAGT 15 482667 0.985099664 9 15 127 1 1.301029996 0.1 0.333333333 0.5 15 0 0 20 X:482623-482697 6 CG3176 FBtr0336920|FBtr0343501 482436|482580 482768|482768 TGATCT 6mer3-8 dme-bantam-3p X + 482655 482706 3'utr CG3176 FlyBase G43687.1 AGGCAAAAATCTTTGATCTATTCTTCGTTAGCGCTGTGCGAGTACTGCCAGA 13 482674 0.804898776 7 11 87 0.909090909 1.301029996 0.318181818 0.538461538 0.727272727 13 2 0 20 X:482655-482706 6 9.5 3644 FBgn0029524 104.6533333 24.39 37.14333333 0.090775895 0.389503895 0.255765952 1 -6 -2.5 0.2 dme-miR-317-3p 8mer-A1 TGTGTTCA X 490671 490678 + X_490671_490678_+ 0.631136475 0.631136783 0.631136629 2.12E-07 CG3156 FBtr0070079 490570 490725 X + 490633 490684 3'utr CG3156 FlyBase G57746.1 TTGGTGGTGGACCAGCTAGTGCTATTGTTACCGGGATATGTGTTCATAAATC 11 490669 0.987272938 5 11 101 1 1.079181246 0.416666667 0.090909091 0.166666667 11 0 0 12 X:490633-490684 8 CG3156 FBtr0070079 490570 490725 TGTGTTCA 8mer-A1 dme-miR-317-3p X + 490618 490682 3'utr CG3156 FlyBase G43690.1 TGGCCCCACCGCTCCTTGGTGGTGGACCAGCTAGTGCTATTGTTACCGGGATATGTGTTCATAAA 14 490670 0.983922151 9 13 103 0.9 1.255272505 0.1 0.285714286 0.5 14 2 0 18 X:490618-490682 8 10.5 3645 FBgn0023536 204 10.62666667 16.39 0.051470588 0.988080301 0.640634533 2 1 1.5 0.2 dme-miR-79-3p 6mer3-8 TAGCTT X 4914175 4914180 + X_4914175_4914180_+ 0.933826975 0.982007615 0.957917295 0.034068829 CG32772 FBtr0342951|FBtr0343533|FBtr0300997|FBtr0342952 4914143|4914143|4914143|4914143 4914961|4915161|4914961|4915161 X + 4914138 4914256 stop_codon CG32772 FlyBase G58862.1 TAAGTAGGCTAGTTAAGAATGGAAAGAAGGTCTCTTTTAGCTTAAGCCCCGAACGATCAGCTGCTAAAGTCCCTGATTAGCATAGCCATAGCCAAAGTAGCATCACATTCAGCACATAC 64 4914173 0.977306137 8 63 413 0.971830986 1.838849091 0.154929577 0.109375 0.197183099 64 2 0 69 X:4914138-4914256 6 CG32772 FBtr0342952|FBtr0300997|FBtr0343533|FBtr0342951 4914143|4914143|4914143|4914143 4915161|4914961|4915161|4914961 TAGCTT 6mer3-8 dme-miR-79-3p X + 4914143 4914234 stop_codon CG32772 FlyBase G44518.1 AGGCTAGTTAAGAATGGAAAGAAGGTCTCTTTTAGCTTAAGCCCCGAACGATCAGCTGCTAAAGTCCCTGATTAGCATAGCCATAGCCAAAG 51 4914173 0.957867862 12 51 347 1 1.892094603 0.115384615 0.37254902 0.58974359 51 0 0 78 X:4914143-4914234 6 50.5 3646 FBgn0052772 546.74 21.57666667 33.00666667 0.092365658 2.340491271 1.529993941 2 2 2 0.2 dme-miR-14-3p 6mer3-8 AAGACT X 4921697 4921702 - X_4921697_4921702_- 0.97733819 0.997746845 0.987542518 0.014431059 CG44774 FBtr0343142 4921676 4927583 X - 4921685 4921777 3'utr CG44774 FlyBase G64792.1 AAACACAGAACCATACAAATTGTAGCCTTACAAACAGAAACAATTATTTATGTGTTAAGAGAACATGTTTTTGTAAAGACTAAATACAAATGA 29 4921705 0.956249217 11 28 189 0.96969697 1.505149978 0.03030303 0.137931034 0.242424242 29 1 0 32 X:4921685-4921777 6 CG44774 FBtr0343142 4921676 4927583 AAGACT 6mer3-8 dme-miR-14-3p X - 4921686 4921720 3'utr CG44774 FlyBase G48808.1 AGAGAACATGTTTTTGTAAAGACTAAATACAAATG 10 4921706 0.669483184 5 8 69 0.8125 0.812913357 0.375 0.5 0.6875 10 2 1 13 X:4921686-4921720 6 11 3647 FBgn0266000 3691.093333 67.20666667 103.37 0.002980147 0.163674239 0.106413853 3 4 3.5 0.2 dme-miR-8-3p 6mer3-8 CAGTAT X 4927350 4927355 - X_4927350_4927355_- 0.999993075 0.99998964 0.999991357 2.47E-06 CG44774 FBtr0343138|FBtr0343140|FBtr0343142|FBtr0343141|FBtr0343139|FBtr0343136|FBtr0345209|FBtr0343135|FBtr0343137 4926662|4926662|4921676|4926662|4926662|4926662|4926662|4926662|4926662 4927583|4927583|4927583|4927583|4927583|4927583|4927583|4927583|4927583 X - 4927331 4927423 3'utr CG44774 FlyBase G64808.1 AATATTTAACATTTCAAGGAACACCTTAGCCTAGACGTTACTTTAGCCTAGACTAGAGCACTGAACTACAGTATGGGCGAATGAGTCCACGCA 60 4927357 0.83351416 14 42 276 0.683544304 1.431363764 0.113924051 0.216666667 0.405063291 60 24 1 54 X:4927331-4927423 6 CG44774 FBtr0343139|FBtr0343141|FBtr0343142|FBtr0343138|FBtr0343140|FBtr0343137|FBtr0343135|FBtr0345209|FBtr0343136 4926662|4926662|4921676|4926662|4926662|4926662|4926662|4926662|4926662 4927583|4927583|4927583|4927583|4927583|4927583|4927583|4927583|4927583 CAGTAT 6mer3-8 dme-miR-8-3p X - 4927331 4927522 3'utr CG44774 FlyBase G48826.1 AGTAACCACCCTGTTACGTTTGTTATACACTAAGCTATTTAACGGCGACCGAAAGCCAAGCTCCCTTCCTTAGCCGCAGGTTCCATATCATTCAAGAGTAATATTTAACATTTCAAGGAACACCTTAGCCTAGACGTTACTTTAGCCTAGACTAGAGCACTGAACTACAGTATGGGCGAATGAGTCCACGCA 100 4927357 0.875410259 24 87 483 0.887323944 1.799340549 0.084507042 0.32 0.521126761 100 15 1 126 X:4927331-4927522 6 36.5 3648 FBgn0266000 3691.093333 67.20666667 103.37 0.009888669 0.543100883 0.353100513 2 2 2 0.2 dme-miR-11-3p 8mer-m1 CTGTGATG X 4955091 4955098 + X_4955091_4955098_+ 0.459362779 0.454985034 0.457173906 0.003095572 Ptp4E FBtr0301796|FBtr0343529|FBtr0070724|FBtr0301794|FBtr0343528|FBtr0301793 4954603|4954603|4954603|4954603|4955001|4954603 4955916|4955425|4955916|4955916|4955916|4955916 X + 4955068 4955111 3'utr Ptp4E FlyBase G58878.1 CATATACTATACGTAAAATCTGCCTGTGATGTGCTGGATGTGAT 54 4955088 0.758107803 8 45 393 0.887096774 1.439332694 0.35483871 0.111111111 0.225806452 54 6 1 55 X:4955068-4955111 8 Ptp4E FBtr0301793|FBtr0343528|FBtr0301794|FBtr0070724|FBtr0343529|FBtr0301796 4954603|4955001|4954603|4954603|4954603|4954603 4955916|4955916|4955916|4955916|4955425|4955916 CTGTGATG 8mer-m1 dme-miR-11-3p X + 4955069 4955144 3'utr Ptp4E FlyBase G44535.1 ATATACTATACGTAAAATCTGCCTGTGATGTGCTGGATGTGATTTGTCTACGAAGTGGCACTCGGAGTTGCTGTCA 49 4955087 0.982916455 9 45 374 0.915492958 1.511883361 0.436619718 0.346938776 0.549295775 49 5 1 65 X:4955069-4955144 8 49.5 3649 FBgn0004368 1052.996667 19.90333333 30.39 0.047008696 2.4870206 1.628825271 3 4 3.5 0.2 dme-miR-276a-3p 6mer2-7 GTTCCT X 503367 503372 + X_503367_503372_+ 0.98425426 0.998447666 0.991350963 0.010036249 svr FBtr0070086|FBtr0070085|FBtr0344737|FBtr0340146 502970|502970|502970|502970 504319|504319|504319|504319 X + 503331 503427 5'utr svr FlyBase G57756.1 TTTTTCGCATTTTCATACGCTTATATGCCAGCCTATGTTCCTTCCACGCCATTACTTCAGACGCGCACATATTTAGTGGATGCTTGATTTGTATATA 24 503368 0.963464403 7 21 187 0.888888889 1.380211242 0.148148148 0.125 0.222222222 24 3 0 24 X:503331-503427 6 svr FBtr0070085|FBtr0344737|FBtr0340146|FBtr0070086 502970|502970|502970|502970 504319|504319|504319|504319 GTTCCT 6mer2-7 dme-miR-276a-3p X + 503353 503391 5'utr svr FlyBase G43698.1 ATATGCCAGCCTATGTTCCTTCCACGCCATTACTTCAGA 12 503368 0.975682759 4 12 79 1 1.322219295 0.047619048 0.5 0.714285714 12 0 0 21 X:503353-503391 6 13 3650 FBgn0004648 2059.716667 56.39666667 86.34666667 0.006311548 0.230510077 0.150555899 -1 -1 -1 0.2 dme-miR-252-5p 8mer-m1 GTACTTAG X 503506 503513 + X_503506_503513_+ 0.632930982 0.633190734 0.633060858 0.000183636 svr FBtr0070086|FBtr0070085|FBtr0344737|FBtr0340146 502970|502970|502970|502970 504319|504319|504319|504319 X + 503489 503549 5'utr svr FlyBase G57757.1 AAGGAAATAAGCGAATTGTACTTAGGCAATATGCAGAAATTGGCCCACTTATGGTCATCGA 12 503505 0.983825368 3 11 59 0.916666667 1.041392685 0 0 0 12 1 0 11 X:503489-503549 8 svr FBtr0070085|FBtr0344737|FBtr0340146|FBtr0070086 502970|502970|502970|502970 504319|504319|504319|504319 GTACTTAG 8mer-m1 dme-miR-252-5p X + 503479 503539 5'utr svr FlyBase G43699.1 GAAATAAATTAAGGAAATAAGCGAATTGTACTTAGGCAATATGCAGAAATTGGCCCACTTA 7 503505 0.95680301 3 6 32 1 0.954242509 0.444444444 0.142857143 0.333333333 7 0 0 9 X:503479-503539 8 6.5 3651 FBgn0004648 2059.716667 56.39666667 86.34666667 0.003155774 0.115255039 0.075277949 1 1 1 0.2 dme-miR-304-5p 7mer-A1 GAGATTA X 5069248 5069254 + X_5069248_5069254_+ 0.823349167 0.823343354 0.823346261 4.10E-06 ovo FBtr0070738|FBtr0301914|FBtr0100408|FBtr0070739|FBtr0070740 5069079|5069079|5069079|5069079|5069079 5070772|5070929|5070772|5070929|5070929 X + 5069226 5069274 3'utr ovo FlyBase G58886.1 TGCGGAGGATACGGAATTATTGGAGATTATGCTTATTATGTATATTTTT 29 5069251 0.989747065 3 29 293 1 1.579783597 0.289473684 0.24137931 0.421052632 29 0 0 38 X:5069226-5069274 7 ovo FBtr0070740|FBtr0100408|FBtr0070739|FBtr0070738|FBtr0301914 5069079|5069079|5069079|5069079|5069079 5070929|5070772|5070929|5070772|5070929 GAGATTA 7mer-A1 dme-miR-304-5p X + 5069236 5069272 3'utr ovo FlyBase G44541.1 ACGGAATTATTGGAGATTATGCTTATTATGTATATTT 18 5069252 0.767705229 4 18 181 1 1.380211242 0 0.277777778 0.458333333 18 0 0 24 X:5069236-5069272 7 23.5 3652 FBgn0003028 7.666666667 0.146666667 0.23 3.065217391 160.2272727 102.173913 -3 -4 -3.5 0.2 dme-miR-1008-3p 6mer2-7 GCTGTG X 5069352 5069357 + X_5069352_5069357_+ 0.989842024 0.990500035 0.990171029 0.000465276 ovo FBtr0070738|FBtr0301914|FBtr0100408|FBtr0070739|FBtr0070740 5069079|5069079|5069079|5069079|5069079 5070772|5070929|5070772|5070929|5070929 X + 5069317 5069370 3'utr ovo FlyBase G58887.1 AGTACCCACTGTATCATGCTACCCCACTTCACTTTGCTGTGCAAATCTCTCTCA 19 5069350 0.985975946 5 19 160 1 1.342422681 0 0.157894737 0.272727273 19 0 0 22 X:5069317-5069370 6 ovo FBtr0070740|FBtr0100408|FBtr0070739|FBtr0070738|FBtr0301914 5069079|5069079|5069079|5069079|5069079 5070929|5070772|5070929|5070772|5070929 GCTGTG 6mer2-7 dme-miR-1008-3p X + 5069332 5069371 3'utr ovo FlyBase G44542.1 ATGCTACCCCACTTCACTTTGCTGTGCAAATCTCTCTCAC 6 5069350 0.982469194 2 5 57 0.888888889 0.903089987 0 0.333333333 0.555555556 6 1 0 8 X:5069332-5069371 6 11.5 3653 FBgn0003028 7.666666667 0.146666667 0.23 1.5 78.40909091 50 2 2 2 0.2 dme-bantam-3p 6mer3-8 TGATCT X 5069937 5069942 + X_5069937_5069942_+ 0.999547661 0.990471217 0.995009439 0.006418055 ovo FBtr0070738|FBtr0301914|FBtr0100408|FBtr0070739|FBtr0070740 5069079|5069079|5069079|5069079|5069079 5070772|5070929|5070772|5070929|5070929 X + 5069919 5069958 3'utr ovo FlyBase G58888.1 AATCGAATCGCGAGAATATGATCTACTGAATATATAGTTT 15 5069937 0.705586519 2 14 94 1 1.278753601 0.105263158 0.266666667 0.421052632 15 0 0 19 X:5069919-5069958 6 ovo FBtr0070740|FBtr0100408|FBtr0070739|FBtr0070738|FBtr0301914 5069079|5069079|5069079|5069079|5069079 5070929|5070772|5070929|5070772|5070929 TGATCT 6mer3-8 dme-bantam-3p X + 5069914 5069953 3'utr ovo FlyBase G44543.1 TGGAAAATCGAATCGCGAGAATATGATCTACTGAATATAT 11 5069937 0.958003785 4 11 62 1 1.230448921 0.176470588 0.363636364 0.588235294 11 0 0 17 X:5069914-5069953 6 12.5 3654 FBgn0003028 7.666666667 0.146666667 0.23 1.630434783 85.22727273 54.34782609 0 0 0 0.2 dme-bantam-3p 6mer3-8 TGATCT X 5069998 5070003 + X_5069998_5070003_+ 0.997143891 0.99999875 0.99857132 0.002018648 ovo FBtr0070738|FBtr0301914|FBtr0100408|FBtr0070739|FBtr0070740 5069079|5069079|5069079|5069079|5069079 5070772|5070929|5070772|5070929|5070929 X + 5069978 5070016 3'utr ovo FlyBase G58889.1 GGCAATACCACCAATTGTACTGATCTTTAATGAACAAAC 7 5070005 0.764810314 5 7 55 1 0.903089987 0 0.142857143 0.25 7 0 0 8 X:5069978-5070016 6 ovo FBtr0070740|FBtr0100408|FBtr0070739|FBtr0070738|FBtr0301914 5069079|5069079|5069079|5069079|5069079 5070929|5070772|5070929|5070772|5070929 TGATCT 6mer3-8 dme-bantam-3p X + 5069977 5070010 3'utr ovo FlyBase G44544.1 AGGCAATACCACCAATTGTACTGATCTTTAATGA 5 5069995 0.980426113 4 5 37 1 0.903089987 0.25 0.4 0.625 5 0 0 8 X:5069977-5070010 6 6 3655 FBgn0003028 7.666666667 0.146666667 0.23 0.782608696 40.90909091 26.08695652 -7 3 -2 0.2 dme-miR-8-3p 8mer-A1 CAGTATTA X 5072734 5072741 - X_5072734_5072741_- 0.613305163 0.598847792 0.606076477 0.010222926 CG32767 FBtr0331758 5071025 5077136 X - 5072729 5072776 3'utr CG32767 FlyBase G64823.1 CGTATTTATACACTATGAATGTCTAGTCGTATTTTCAGTATTATGTAA 21 5072744 0.655660895 8 20 228 0.961538462 1.397940009 0.076923077 0.142857143 0.307692308 21 1 0 25 X:5072729-5072776 8 CG32767 FBtr0331758 5071025 5077136 CAGTATTA 8mer-A1 dme-miR-8-3p X - 5072730 5072771 3'utr CG32767 FlyBase G48842.1 TTATACACTATGAATGTCTAGTCGTATTTTCAGTATTATGTA 12 5072757 0.842752395 4 9 113 0.785714286 0.740362689 0 0.166666667 0.285714286 12 2 1 11 X:5072730-5072771 8 1 3656 FBgn0052767 1383.503333 20.81666667 32.11666667 0.000722803 0.048038431 0.031136482 3 16 9.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 5072749 5072755 - X_5072749_5072755_- 0.338569392 0.623318691 0.480944041 0.201348161 CG32767 FBtr0331758 5071025 5077136 X - 5072729 5072776 3'utr CG32767 FlyBase G64823.1 CGTATTTATACACTATGAATGTCTAGTCGTATTTTCAGTATTATGTAA 21 5072744 0.655660895 8 20 228 0.961538462 1.397940009 0.076923077 0.142857143 0.307692308 21 1 0 25 X:5072729-5072776 7 CG32767 FBtr0331758 5071025 5077136 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X - 5072730 5072771 3'utr CG32767 FlyBase G48842.1 TTATACACTATGAATGTCTAGTCGTATTTTCAGTATTATGTA 12 5072757 0.842752395 4 9 113 0.785714286 0.740362689 0 0.166666667 0.285714286 12 2 1 11 X:5072730-5072771 7 6.5 3657 FBgn0052767 1383.503333 20.81666667 32.11666667 0.004698218 0.3122498 0.20238713 -11 2 -4.5 0.2 dme-miR-13b-2-5p 6mer3-8 TTTGAC X 5075251 5075256 - X_5075251_5075256_- 0.921910875 0.99784489 0.959877883 0.053693446 CG32767 FBtr0331757|FBtr0302118|FBtr0302119|FBtr0300995|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 X - 5075183 5075293 3'utr CG32767 FlyBase G64827.1 TCTTATGTGCAATCTCCCCCCATCACTGAAACTGAACTTTGACCTCTTTCTCACCTTCGCTCGAACACCTTGTGGTTTCCTTAATTAGTTGCTAAGTATCCACGATAAACA 43 5075255 0.950771816 12 40 338 0.943396226 1.698970004 0.264150943 0.23255814 0.377358491 43 3 0 50 X:5075183-5075293 6 CG32767 FBtr0300995|FBtr0302119|FBtr0302118|FBtr0331757|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 TTTGAC 6mer3-8 dme-miR-13b-2-5p X - 5075202 5075304 3'utr CG32767 FlyBase G48846.1 TTTTTAAAAGTTCTTATGTGCAATCTCCCCCCATCACTGAAACTGAACTTTGACCTCTTTCTCACCTTCGCTCGAACACCTTGTGGTTTCCTTAATTAGTTGC 34 5075255 0.90333967 14 30 282 0.849056604 1.653212514 0.264150943 0.441176471 0.641509434 34 8 0 45 X:5075202-5075304 6 19 3658 FBgn0052767 1383.503333 20.81666667 32.11666667 0.013733252 0.912730184 0.59159315 -1 -1 -1 0.2 dme-bantam-3p 7mer-m8 TGATCTC X 5075689 5075695 - X_5075689_5075695_- 0.629935938 0.62023838 0.625087159 0.006857168 CG32767 FBtr0331757|FBtr0302118|FBtr0302119|FBtr0300995|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 X - 5075544 5075720 3'utr CG32767 FlyBase G64829.1 AATTTTAGTTGTATAGTTTTGCATTTGATCTCTCGGCTTTAGTTTTTGCATTCAAAGCGAAAGAAAATTCAGTTCCTGTGTAATTGCAAAGATAACTTGAGAAATTGTATTATAATTTAATGGACTAGGCAATCAATGTGCTGCTTTCATGCGGAAAGATATGCATATATGTATGAA 302 5075696 0.987367697 35 289 3392 0.959128065 1.944482672 0.108991826 0.185430464 0.329700272 302 12 3 352 X:5075544-5075720 7 CG32767 FBtr0300995|FBtr0302119|FBtr0302118|FBtr0331757|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 TGATCTC 7mer-m8 dme-bantam-3p X - 5075671 5075720 3'utr CG32767 FlyBase G48849.1 AATTTTAGTTGTATAGTTTTGCATTTGATCTCTCGGCTTTAGTTTTTGCA 181 5075696 0.708418765 13 173 2079 0.96 2.421603927 0.101818182 0.397790055 0.603636364 181 11 0 264 X:5075671-5075720 7 219.5 3659 FBgn0052767 1383.503333 20.81666667 32.11666667 0.158655201 10.54443555 6.834457706 1 1 1 0.2 dme-miR-1003-3p 6mer3-8 ATGTGA X 5075844 5075849 - X_5075844_5075849_- 0.999996994 0.999986525 0.999991759 7.42E-06 CG32767 FBtr0331757|FBtr0302118|FBtr0302119|FBtr0300995|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 X - 5075834 5075897 3'utr CG32767 FlyBase G64831.1 TAGTGTAAAAAAAAAAATGAAGAAAATCTCAAATGAACTTGTAACTTGATGTGAAACACGAATT 15 5075851 0.970654228 6 14 82 1 1.255272505 0.166666667 0.2 0.333333333 15 0 0 18 X:5075834-5075897 6 CG32767 FBtr0300995|FBtr0302119|FBtr0302118|FBtr0331757|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 ATGTGA 6mer3-8 dme-miR-1003-3p X - 5075830 5075865 3'utr CG32767 FlyBase G48851.1 ATGAACTTGTAACTTGATGTGAAACACGAATTGTTT 9 5075849 0.991305702 5 6 57 0.727272727 0.602059991 0.090909091 0.222222222 0.363636364 9 2 1 8 X:5075830-5075865 6 8 3660 FBgn0052767 1383.503333 20.81666667 32.11666667 0.005782422 0.384307446 0.249091853 2 0 1 0.2 dme-bantam-3p 6mer3-8 TGATCT X 5075934 5075939 - X_5075934_5075939_- 0.999816736 0.999884572 0.999850654 4.80E-05 CG32767 FBtr0331757|FBtr0302118|FBtr0302119|FBtr0300995|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 X - 5075922 5075978 3'utr CG32767 FlyBase G64832.1 TGCTCTCGTGCCCTCTCTGTCACTGTCCCCATCTCACTCTGATCTGTTTATAAGAAG 42 5075940 0.789367719 10 39 418 0.931818182 1.311753861 0.181818182 0.047619048 0.090909091 42 2 1 41 X:5075922-5075978 6 CG32767 FBtr0300995|FBtr0302119|FBtr0302118|FBtr0331757|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 TGATCT 6mer3-8 dme-bantam-3p X - 5075925 5075956 3'utr CG32767 FlyBase G48852.1 CTGTCCCCATCTCACTCTGATCTGTTTATAAG 12 5075939 0.763357932 4 12 116 1 1.204119983 0 0.25 0.4375 12 0 0 16 X:5075925-5075956 6 24 3661 FBgn0052767 1383.503333 20.81666667 32.11666667 0.017347266 1.152922338 0.747275558 1 0 0.5 0.2 dme-bantam-3p 8mer-A1 TGATCTCA X 513791 513798 - X_513791_513798_- 0.602470262 0.616618447 0.609544354 0.010004217 elav FBtr0307173 509233 517791 X - 513711 513820 3'utr elav FlyBase G63820.1 AAGAGGTGCCATCGGAATCCGTTGATCTCAGCTAAAAAGACATCCCCAGACATTCCCAGTCGTGTTTGGTTTAGTCCTCGTAACTCCACGATTTAAGGGGGTATCCCCCG 76 513799 0.967675496 10 76 417 1 1.995635195 0.191919192 0.263157895 0.434343434 76 0 0 99 X:513711-513820 8 elav FBtr0307173 509233 517791 TGATCTCA 8mer-A1 dme-bantam-3p X - 513761 513820 3'utr elav FlyBase G48109.1 AAGAGGTGCCATCGGAATCCGTTGATCTCAGCTAAAAAGACATCCCCAGACATTCCCAGT 47 513799 0.970093052 7 45 255 0.966666667 1.763427994 0.266666667 0.234042553 0.4 47 2 0 58 X:513761-513820 8 59 3662 FBgn0260400 1799.413333 52.41 80.75 0.032788464 1.125739363 0.730650155 1 1 1 0.2 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 513834 513841 - X_513834_513841_- 0.62444967 0.618866359 0.621658014 0.003947989 elav FBtr0307173 509233 517791 X - 513821 513878 3'utr elav FlyBase G63821.1 TCCTCTGACAGTCACATGAAGAAGATGAAGGAATCGATCTAGTCAAGGCCCATCTAAC 44 513841 0.702031632 6 36 174 0.823529412 0.924279286 0.352941176 0.159090909 0.274509804 44 5 4 42 X:513821-513878 8 elav FBtr0307173 509233 517791 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X - 513821 513859 3'utr elav FlyBase G48110.1 AGAAGATGAAGGAATCGATCTAGTCAAGGCCCATCTAAC 24 513841 0.662849714 4 22 89 0.918918919 1.054357662 0.27027027 0.375 0.594594595 24 1 2 34 X:513821-513859 8 31.5 3663 FBgn0260400 1799.413333 52.41 80.75 0.017505706 0.601030338 0.390092879 0 0 0 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 514231 514236 - X_514231_514236_- 0.999976554 1.000000001 0.999988277 1.65E-05 elav FBtr0307173|FBtr0307173|FBtr0307173 509233|509233|509233 517791|517791|517791 X - 514210 514247 3'utr elav FlyBase G63822.1 ACTGCAAACTCCTGTGAATTCTATCGAATGAATATTTA 17 514229 0.629703102 5 16 112 0.958333333 1.361727836 0.041666667 0.294117647 0.5 17 1 0 23 X:514210-514247 6 elav FBtr0307173|FBtr0307173|FBtr0307173 509233|509233|509233 517791|517791|517791 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X - 514211 514288 3'utr elav FlyBase G48111.1 TTTAGTTGATATTCTAGCTATATACGATCTGTGCGTATGTTACTGCAAACTCCTGTGAATTCTATCGAATGAATATTT 13 514238 0.982575278 6 12 97 0.894736842 0.753327667 0.263157895 0.384615385 0.578947368 13 0 2 17 X:514211-514288 6 13.5 3664 FBgn0260400 1799.413333 52.41 80.75 0.007502445 0.25758443 0.167182663 -7 2 -2.5 0.2 dme-miR-33-5p 7mer-A1 AATGCAA X 515058 515064 - X_515058_515064_- 0.555015398 0.688977544 0.621996471 0.094725509 elav FBtr0307173 509233 517791 X - 514932 515082 3'utr elav FlyBase G63825.1 ATTGTGCAATAGTTTTAAAATGCAACTGAAGGCAAAACACAACAACAAATTTTCAAGTATCTCAAATTATAATTTCATTAGGCGAGGAAAACGAGAAATGAAATATTTGATCTTATGAAACATAATTGTATGATTACTCTATACACACCGC 48 515057 0.929408603 18 43 357 0.909090909 1.22184875 0.2 0.145833333 0.254545455 48 3 2 50 X:514932-515082 7 elav FBtr0307173 509233 517791 AATGCAA 7mer-A1 dme-miR-33-5p X - 514991 515121 3'utr elav FlyBase G48114.1 TTGTCACCGATGATCAAATTAATTGTATTAATTATAATTATTGTGCAATAGTTTTAAAATGCAACTGAAGGCAAAACACAACAACAAATTTTCAAGTATCTCAAATTATAATTTCATTAGGCGAGGAAAAC 19 515056 0.999365495 12 19 123 1 1.491361694 0.032258065 0.368421053 0.612903226 19 0 0 31 X:514991-515121 7 8 3665 FBgn0260400 1799.413333 52.41 80.75 0.004445893 0.152642625 0.099071207 -7 -8 -7.5 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 515404 515410 - X_515404_515410_- 0.822398153 0.821841134 0.822119644 0.000393929 elav FBtr0307173 509233 517791 X - 515397 515433 3'utr elav FlyBase G63829.1 AGAAGCCGCCTGCTCTTCCCTTTCCAAAGATTTACCC 23 515412 0.78318523 3 23 194 1 1.397940009 0.12 0.086956522 0.16 23 0 0 25 X:515397-515433 7 elav FBtr0307173 509233 517791 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X - 515397 515489 3'utr elav FlyBase G48116.1 TCAAAACCAAAAGAACTATGGCAATTTCTAGCTAATAAAATGATTGAATGATTGATAGAAGCCGCCTGCTCTTCCCTTTCCAAAGATTTACCC 20 515412 0.980244575 7 20 145 1 1.491361694 0.064516129 0.4 0.612903226 20 0 0 31 X:515397-515489 7 17 3666 FBgn0260400 1799.413333 52.41 80.75 0.009447524 0.324365579 0.210526316 2 2 2 0.2 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 515551 515558 - X_515551_515558_- 0.596868244 0.591896897 0.59438257 0.00351524 elav FBtr0307173 509233 517791 X - 515489 515576 3'utr elav FlyBase G63830.1 AAAATTCGCAACAAGAACTCTAGTCAGAAGATGGAAAACAAGAATATTATTATGATGAGGCAGCCGCATATAAGGAGGAATAGTAGAT 76 515558 0.903199156 10 70 284 0.947916667 1.481920138 0.09375 0.223684211 0.385416667 76 3 2 91 X:515489-515576 8 elav FBtr0307173 509233 517791 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X - 515540 515580 3'utr elav FlyBase G48117.2 GAACAAAATTCGCAACAAGAACTCTAGTCAGAAGATGGAAA 43 515558 0.84046978 4 33 131 0.845070423 1.176091259 0.169014085 0.348837209 0.605633803 43 8 3 60 X:515540-515580 8 48 3667 FBgn0260400 1799.413333 52.41 80.75 0.026675361 0.915855753 0.594427245 0 0 0 0.2 dme-miR-282-5p 6mer2-7 GAGGCT X 516919 516924 - X_516919_516924_- 0.838342545 0.821545683 0.829944114 0.011877131 elav FBtr0100254|FBtr0307173 516848|509233 517791|517791 X - 516891 516955 3'utr elav FlyBase G63833.1 GCGCATATAATAGGTATATATGCATAACATGGAGGCTGCTACAGTATTACAAGAAACATAAAAAT 390 516926 0.929410632 6 387 2004 0.993670886 2.371990911 0.276371308 0.171794872 0.318565401 390 2 1 471 X:516891-516955 6 elav FBtr0100254|FBtr0307173 516848|509233 517791|517791 GAGGCT 6mer2-7 dme-miR-282-5p X - 516874 516948 3'utr elav FlyBase G48118.1 TAATAGGTATATATGCATAACATGGAGGCTGCTACAGTATTACAAGAAACATAAAAATTAAAACTATATACTTAA 277 516926 0.959733538 5 272 1329 0.979498861 2.33243846 0.277904328 0.375451264 0.605922551 277 8 1 430 X:516874-516948 6 332.5 3668 FBgn0260400 1799.413333 52.41 80.75 0.184782448 6.34420912 4.117647059 2 2 2 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT X 517345 517351 - X_517345_517351_- 0.495826163 0.593991383 0.544908773 0.069413279 elav FBtr0114366|FBtr0070091|FBtr0100254|FBtr0307173 517234|517234|516848|509233 517791|517791|517791|517791 X - 517334 517368 3'utr elav FlyBase G63835.1 AAACACACTGTGGCAGTGGCAGCTGTGAAAGGTCA 24 517352 0.886232298 4 23 100 0.9375 1 0.09375 0.25 0.4375 24 0 2 30 X:517334-517368 7 elav FBtr0114366|FBtr0070091|FBtr0100254|FBtr0307173 517234|517234|516848|509233 517791|517791|517791|517791 GGCAGCT 7mer-m8 dme-miR-980-3p X - 517294 517367 3'utr elav FlyBase G48119.1 AACACACTGTGGCAGTGGCAGCTGTGAAAGGTCAAAGGTTGGCACAGTCGATCTAGTCACAAAGCAAAACAAAG 18 517352 0.956633838 6 17 80 0.857142857 1.380211242 0.392857143 0.333333333 0.571428571 18 4 0 24 X:517294-517367 7 17 3669 FBgn0260400 1799.413333 52.41 80.75 0.009447524 0.324365579 0.210526316 1 1 1 0.2 dme-miR-305-5p 7mer-A1 GTACAAA X 5319001 5319007 - X_5319001_5319007_- 0.509626056 0.493049188 0.501337622 0.011721638 Rnp4F FBtr0070753|FBtr0112876|FBtr0340477|FBtr0070752 5318926|5318926|5318926|5318926 5319135|5319135|5319135|5319135 X - 5318994 5319037 3'utr Rnp4F FlyBase G64855.1 CAACCTAAACAGACAAGGTTGGAGAACACTGTACAAAGAGAAAA 20 5319008 0.889598479 3 19 55 0.952380952 1 0.285714286 0.05 0.095238095 20 0 1 20 X:5318994-5319037 7 Rnp4F FBtr0070752|FBtr0340477|FBtr0112876|FBtr0070753 5318926|5318926|5318926|5318926 5319135|5319135|5319135|5319135 GTACAAA 7mer-A1 dme-miR-305-5p X - 5318986 5319111 3'utr Rnp4F FlyBase G48868.1 CGGTGCCAGCGGCCATGGTTTAGTTTGTAAGACGAAGACGAAGATTTGGAGCATATATTTTTTTAGATTTAAGGCAACCTAAACAGACAAGGTTGGAGAACACTGTACAAAGAGAAAAACTGTTGT 20 5319008 0.949601018 7 17 86 0.833333333 1.096910013 0.033333333 0.4 0.6 20 4 1 25 X:5318986-5319111 7 15 3670 FBgn0014024 860.4066667 33.54333333 51.90333333 0.017433617 0.447182749 0.28899878 1 1 1 0.2 dme-miR-308-3p 7mer-m1 TGTGATT X 5327209 5327215 - X_5327209_5327215_- 0.425169808 0.467985007 0.446577408 0.030274918 CG3309 FBtr0344827|FBtr0070798 5326673|5326673 5327305|5327305 X - 5327190 5327239 3'utr CG3309 FlyBase G64868.1 CTGTCTGCTAGTATCCTGTGATTGTGTGATTGTGCCTGGCGGTGCTCTTT 51 5327209 0.639092411 13 51 475 1 1.785329835 0.229508197 0.196078431 0.327868852 51 0 0 61 X:5327190-5327239 7 CG3309 FBtr0344827|FBtr0070798 5326673|5326673 5327305|5327305 TGTGATT 7mer-m1 dme-miR-308-3p X - 5327160 5327239 3'utr CG3309 FlyBase G48878.1 CTGTCTGCTAGTATCCTGTGATTGTGTGATTGTGCCTGGCGGTGCTCTTTATCAGTGTAAATAGATTTTAATCGGCGATT 47 5327209 0.990501456 13 43 443 0.914285714 1.10720997 0.285714286 0.382978723 0.585714286 47 2 4 64 X:5327160-5327239 7 47 3671 FBgn0029756 52.66666667 2.41 3.66 0.892405063 19.50207469 12.84153005 -6 -6 -6 0.2 dme-miR-184-5p 6mer3-8 TGATAA X 5412697 5412702 - X_5412697_5412702_- 0.775130976 0.583464808 0.679297892 0.13552847 spoon FBtr0070795 5412384 5414972 X - 5412528 5412738 3'utr spoon FlyBase G64872.1 TCGAATTCATTGTAGATTTGTCACTTGTACAATTGTTGATAAACTGATTAACTGATAACTGATTAACTGACATAGAGATAATGCAAACACGACAGACATGATGTAGAGCACATATTGAAACTAATCTTAGTCGATAGCGAGAAGAGAAGAAGAGACGTGAAGTGAAGAGTCCTCCCTCAAAGATCATCGTAAGTGTGTGGTACTTCTATTT 70 5412705 0.942223787 24 62 473 0.894117647 1.579783597 0.2 0.171428571 0.317647059 70 8 1 76 X:5412528-5412738 6 spoon FBtr0070795 5412384 5414972 TGATAA 6mer3-8 dme-miR-184-5p X - 5412605 5412730 3'utr spoon FlyBase G48882.1 ATTGTAGATTTGTCACTTGTACAATTGTTGATAAACTGATTAACTGATAACTGATTAACTGACATAGAGATAATGCAAACACGACAGACATGATGTAGAGCACATATTGAAACTAATCTTAGTCGA 36 5412705 0.984619078 20 35 280 0.927272727 1.707570176 0.181818182 0.388888889 0.6 36 4 0 51 X:5412605-5412730 6 19.5 3672 FBgn0263987 8368.983333 240.6166667 372.13 0.002330032 0.081041768 0.052401043 3 3 3 0.2 dme-miR-92b-3p 6mer3-8 GTGCAA X 5412925 5412930 - X_5412925_5412930_- 0.973141374 0.954119823 0.963630599 0.013450302 spoon FBtr0070795 5412384 5414972 X - 5412823 5412979 3'utr spoon FlyBase G64873.1 TATCCTAAACTAAAACAACTTTTGGAGGGGCTGCCCTCCACACACTGTAGTGCAAATTCGTTTAATGGTTCCTCGTTTTAATAATGTCGTTTAATGCCTTTGGAAATTCGAACTACATTTTAGTCTATGGAACACTAAATACATATTATTGGTTACT 60 5412932 0.983998334 23 59 464 1 1.857332496 0.208333333 0.166666667 0.305555556 60 0 0 72 X:5412823-5412979 6 spoon FBtr0070795 5412384 5414972 GTGCAA 6mer3-8 dme-miR-92b-3p X - 5412901 5412965 3'utr spoon FlyBase G48884.1 ACAACTTTTGGAGGGGCTGCCCTCCACACACTGTAGTGCAAATTCGTTTAATGGTTCCTCGTTTT 14 5412933 0.843143946 5 13 97 0.916666667 1.342422681 0.125 0.428571429 0.666666667 14 2 0 22 X:5412901-5412965 6 20.5 3673 FBgn0263987 8368.983333 240.6166667 372.13 0.002449521 0.085197756 0.055088276 2 3 2.5 0.2 dme-miR-999-3p 6mer3-8 AGTTAA X 5426559 5426564 + X_5426559_5426564_+ 0.999863211 0.999467492 0.999665351 0.000279802 CG4165 FBtr0070775|FBtr0340461|FBtr0070773|FBtr0340462|FBtr0070772 5426346|5426346|5426346|5426346|5426346 5426906|5426906|5426906|5427219|5426906 X + 5426542 5426615 3'utr CG4165 FlyBase G58932.1 TGGAACAAGCTTTAGTTAGTTAAATGATGCAAAGGAGTAGACACACGCACTCATGTTAAATTGTAGTTCTCAGG 15 5426566 0.986378326 10 11 92 0.722222222 0.812913357 0.333333333 0.133333333 0.277777778 15 4 1 13 X:5426542-5426615 6 CG4165 FBtr0340462|FBtr0070772|FBtr0340461|FBtr0070773|FBtr0070775 5426346|5426346|5426346|5426346|5426346 5427219|5426906|5426906|5426906|5426906 AGTTAA 6mer3-8 dme-miR-999-3p X + 5426536 5426584 3'utr CG4165 FlyBase G44572.1 TTTTTTTGGAACAAGCTTTAGTTAGTTAAATGATGCAAAGGAGTAGACA 6 5426561 0.977929237 6 6 42 1 1 0.1 0.5 0.7 6 0 0 10 X:5426536-5426584 6 7.5 3674 FBgn0029763 634.33 17.08666667 26.07333333 0.011823499 0.438938744 0.287650217 -7 -2 -4.5 0.2 dme-miR-277-3p 7mer-A1 GCATTTA X 5518321 5518327 + X_5518321_5518327_+ 0.45043498 0.494794768 0.472614874 0.031367115 CG12730 FBtr0345785|FBtr0070780 5518138|5518138 5518771|5518771 X + 5518234 5518435 3'utr CG12730 FlyBase G58945.1 GCGAACGAGTATCTGTGTGAGTGCCAGTGCGTGCGCGTGTGTGTGAGTTTGTTTTGAGAGAGCGAGTATCGCTTGCGTTTGCTTGAAGCATTTAAGTCTGAAGTTTGAAATTGTGGCAAGCTTTTGTCGCGGGAACAGTTACCGTATGTGTTATCTAATAGTCGCTAGATATAGGTCAAGAAGTGAAGAAGATAAAGCCAGT 170 5518325 0.987591101 33 157 1397 0.928229665 1.685741739 0.248803828 0.176470588 0.330143541 170 12 3 194 X:5518234-5518435 7 CG12730 FBtr0070780|FBtr0345785 5518138|5518138 5518771|5518771 GCATTTA 7mer-A1 dme-miR-277-3p X + 5518263 5518411 3'utr CG12730 FlyBase G44588.1 CGTGCGCGTGTGTGTGAGTTTGTTTTGAGAGAGCGAGTATCGCTTGCGTTTGCTTGAAGCATTTAAGTCTGAAGTTTGAAATTGTGGCAAGCTTTTGTCGCGGGAACAGTTACCGTATGTGTTATCTAATAGTCGCTAGATATAGGTCA 133 5518325 0.74017343 23 119 1063 0.893401015 1.546542663 0.253807107 0.409090909 0.604060914 132 17 4 176 X:5518263-5518411 7 114 3675 FBgn0029771 260.35 25.59333333 39.07333333 0.437872095 4.45428497 2.917590855 -4 -4 -4 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 5518507 5518513 + X_5518507_5518513_+ 0.62184495 0.613638575 0.617741763 0.005802801 CG12730 FBtr0345785|FBtr0070780 5518138|5518138 5518771|5518771 X + 5518452 5518528 3'utr CG12730 FlyBase G58946.1 GTAGATATAATAGCGAACAGAAAGCGAGAGAAAACCACTAACAAGAGAGCAAATTCCAAAGAGATAAGTTGTATTGT 165 5518505 0.899243026 5 162 360 0.976415094 1.713910354 0.028301887 0.2 0.377358491 165 2 3 207 X:5518452-5518528 7 CG12730 FBtr0070780|FBtr0345785 5518138|5518138 5518771|5518771 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X + 5518485 5518523 3'utr CG12730 FlyBase G44589.1 ACCACTAACAAGAGAGCAAATTCCAAAGAGATAAGTTGT 115 5518505 0.807079408 2 114 230 0.994505495 1.956648579 0.038461538 0.330434783 0.576923077 115 0 1 181 X:5518485-5518523 7 138.5 3676 FBgn0029771 260.35 25.59333333 39.07333333 0.531976186 5.411565512 3.54461696 2 2 2 0.2 dme-bantam-3p 7mer-m8 TGATCTC X 5685736 5685742 - X_5685736_5685742_- 0.640557319 0.66161262 0.651084969 0.014888345 CG3160 FBtr0070847 5685251 5685911 X - 5685665 5685776 3'utr CG3160 FlyBase G64925.1 CAGCGGGAAGTCCAAACTGAGCTCGGCTGGGCGTTGATCTCGATTTGCCCCGATCGCACGTTATATGTATTAATTGTTTTTACGCCTGCTGTCTGCTGCATTCGATTGGCGA 85 5685743 0.981849597 12 84 624 0.989473684 1.973127854 0.347368421 0.082352941 0.178947368 85 1 0 94 X:5685665-5685776 7 CG3160 FBtr0070847 5685251 5685911 TGATCTC 7mer-m8 dme-bantam-3p X - 5685700 5685761 3'utr CG3160 FlyBase G48928.1 ACTGAGCTCGGCTGGGCGTTGATCTCGATTTGCCCCGATCGCACGTTATATGTATTAATTGT 46 5685743 0.97796181 9 43 337 0.925 1.86923172 0.425 0.456521739 0.6875 46 6 0 74 X:5685700-5685761 7 60.5 3677 FBgn0029789 138.8966667 4.523333333 6.876666667 0.435575608 13.37509211 8.797867184 1 1 1 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA X 5708608 5708615 + X_5708608_5708615_+ 0.457657331 0.455177534 0.456417432 0.001753483 CG4096 FBtr0301084|FBtr0301083 5707646|5708513 5708633|5708633 X + 5708581 5708629 3'utr CG4096 FlyBase G58976.1 TTCAGCGAGTAAGCGATCATCCCAGATGTACTTAACTAACTATACGCAC 33 5708607 0.860656772 2 33 225 1 1.612783857 0 0.212121212 0.365853659 33 0 0 41 X:5708581-5708629 8 CG4096 FBtr0301084|FBtr0301083 5707646|5708513 5708633|5708633 GTACTTAA 8mer-A1 dme-miR-252-5p X + 5708582 5708629 3'utr CG4096 FlyBase G44613.1 TCAGCGAGTAAGCGATCATCCCAGATGTACTTAACTAACTATACGCAC 25 5708607 0.868937788 2 25 177 1 1.602059991 0.1 0.48 0.675 25 0 0 40 X:5708582-5708629 8 29 3678 FBgn0029791 34.02 1.16 1.753333333 0.852439741 25 16.53992395 1 1 1 0.2 dme-miR-283-5p 8mer-m1 TGATATTT X 5720040 5720047 - X_5720040_5720047_- 0.526236559 0.496744713 0.511490636 0.020853922 CG32758 FBtr0340670|FBtr0339525 5719372|5719734 5721627|5721627 X - 5720011 5720102 3'utr CG32758 FlyBase G64934.1 TTATAGAATGGCATATAGGCATACATTTATCAACGATGCAAGTGACGTCTGCTTGTGATATTTACAATTTACACGATTATTATGATTAATTT 171 5720050 0.848181391 16 160 1547 0.944186047 1.462397998 0.269767442 0.187134503 0.353488372 171 6 6 203 X:5720011-5720102 8 CG32758 FBtr0339525|FBtr0340670 5719734|5719372 5721627|5721627 TGATATTT 8mer-m1 dme-miR-283-5p X - 5720028 5720096 3'utr CG32758 FlyBase G48935.1 AATGGCATATAGGCATACATTTATCAACGATGCAAGTGACGTCTGCTTGTGATATTTACAATTTACACG 129 5720051 0.988979668 11 118 1168 0.878947368 1.377618431 0.273684211 0.317829457 0.536842105 129 17 6 167 X:5720028-5720096 8 141.5 3679 FBgn0052758 1999.443333 76.95666667 118.6333333 0.070769698 1.838697102 1.192750773 3 4 3.5 0.2 dme-miR-1007-3p 8mer-A1 TGAGCTTA X 5739327 5739334 - X_5739327_5739334_- 0.623716036 0.621046471 0.622381253 0.001887622 IntS6 FBtr0332400|FBtr0332399|FBtr0070842|FBtr0070841|FBtr0332401 5738661|5738661|5738661|5738661|5738661 5739981|5739981|5739981|5739981|5739981 X - 5739317 5739443 3'utr IntS6 FlyBase G64942.1 AAATTTACTCTTGAGCTTAGGAATAATTTTAAATAGACTTAGATAAATTAAGATAAATCTAAGTGTAGTGTATGTGTATAAAAAAAAAGGGAAAAGTTTAGGAAAAGCTTGAGCTTAATGAGCCCCA 17 5739334 0.979884822 11 17 119 1 1.301029996 0.25 0.176470588 0.3 17 0 0 20 X:5739317-5739443 8 IntS6 FBtr0332401|FBtr0070841|FBtr0070842|FBtr0332399|FBtr0332400 5738661|5738661|5738661|5738661|5738661 5739981|5739981|5739981|5739981|5739981 TGAGCTTA 8mer-A1 dme-miR-1007-3p X - 5739316 5739361 3'utr IntS6 FlyBase G48939.1 AAAAAAGGGAAAAGTTTAGGAAAAGCTTGAGCTTAATGAGCCCCAC 6 5739334 0.966603628 3 6 33 1 0.903089987 0 0.333333333 0.5 6 0 0 8 X:5739316-5739361 8 6.5 3680 FBgn0261383 1360.436667 27.15666667 41.81333333 0.004777878 0.239351909 0.155452806 0 0 0 0.2 dme-miR-11-3p 8mer-m1 CTGTGATG X 5739923 5739930 - X_5739923_5739930_- 0.461411885 0.452344606 0.456878245 0.006411549 IntS6 FBtr0332400|FBtr0332399|FBtr0070842|FBtr0070841|FBtr0332401 5738661|5738661|5738661|5738661|5738661 5739981|5739981|5739981|5739981|5739981 X - 5739911 5739958 3'utr IntS6 FlyBase G64946.1 AGCCCGCGGGGTCATCCAATCCATCTGTCTGTGATGTCAACAAAATCG 42 5739931 0.793148294 4 40 308 0.960784314 1.69019608 0.058823529 0.19047619 0.333333333 42 2 0 49 X:5739911-5739958 8 IntS6 FBtr0332401|FBtr0070841|FBtr0070842|FBtr0332399|FBtr0332400 5738661|5738661|5738661|5738661|5738661 5739981|5739981|5739981|5739981|5739981 CTGTGATG 8mer-m1 dme-miR-11-3p X - 5739911 5739963 3'utr IntS6 FlyBase G48942.2 CACTGAGCCCGCGGGGTCATCCAATCCATCTGTCTGTGATGTCAACAAAATCG 24 5739932 0.975410477 5 20 149 0.894736842 1.531478917 0.052631579 0.416666667 0.631578947 24 4 0 34 X:5739911-5739963 8 31 3681 FBgn0261383 1360.436667 27.15666667 41.81333333 0.022786801 1.141524488 0.741390306 1 2 1.5 0.2 dme-miR-2a-2-5p 7mer-m1 GATGAGG X 5760654 5760660 - X_5760654_5760660_- 0.441964871 0.821270966 0.631617919 0.268209915 MAPk-Ak2 FBtr0302940|FBtr0070839|FBtr0308577|FBtr0070837 5759906|5759906|5759906|5759906 5760715|5760715|5760715|5760715 X - 5760621 5760690 3'utr MAPk-Ak2 FlyBase G64972.2 CACGGCCAACCCGGGAGTGAGATGAGATGAGATGAGGAGAGATGGGCGTAGGATGTAGGATGGGCGAACC 18 5760667 0.940777874 4 18 60 1 1.278753601 0.315789474 0.055555556 0.105263158 18 0 0 19 X:5760621-5760690 7 MAPk-Ak2 FBtr0070837|FBtr0308577|FBtr0070839|FBtr0302940 5759906|5759906|5759906|5759906 5760715|5760715|5760715|5760715 GATGAGG 7mer-m1 dme-miR-2a-2-5p X - 5760573 5760678 3'utr MAPk-Ak2 FlyBase G48963.1 GGGAGTGAGATGAGATGAGATGAGGAGAGATGGGCGTAGGATGTAGGATGGGCGAACCATCGGTTTAACACTTAAGCGGATAACAATGTTGTACAATGCTTTACAA 15 5760648 0.971202314 9 14 78 0.904761905 1.278753601 0.523809524 0.333333333 0.523809524 15 2 0 19 X:5760573-5760678 7 10.5 3682 FBgn0013987 1196.673333 75.86 116.6 0.008774324 0.138412866 0.090051458 7 -12 -2.5 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC X 5873919 5873925 - X_5873919_5873925_- 0.661198689 0.661194702 0.661196696 2.83E-06 mof FBtr0070829 5873838 5874268 X - 5873868 5874046 3'utr mof FlyBase G64986.1 TTAAGGAGTTTTACGGATAGGCTGTTGTAACTCTTAATGATAGAACCAAATGTCTAATTCGTTTGGCTAATGTTTTTGGAGAGGGAATTTGGAACAACCATTTAAAAATTTTAAAAACTTCTGTGTTCTTGAAATATATATCTTTAACTACTTTATCTCGAAAAACTCTGGACTTGTTA 90 5873918 0.988649972 22 85 805 0.954545455 1.544068044 0.081818182 0.2 0.345454545 90 3 2 105 X:5873868-5874046 7 mof FBtr0070829 5873838 5874268 TGTGTTC 7mer-m8 dme-miR-317-3p X - 5873899 5873973 3'utr mof FlyBase G48975.1 TTTTGGAGAGGGAATTTGGAACAACCATTTAAAAATTTTAAAAACTTCTGTGTTCTTGAAATATATATCTTTAAC 50 5873927 0.799905759 12 46 445 0.892307692 1.763427994 0.015384615 0.26 0.430769231 50 7 0 58 X:5873899-5873973 7 51 3683 FBgn0014340 384.9966667 15.43 23.56333333 0.132468679 3.305249514 2.164379686 -7 2 -2.5 0.2 dme-miR-1008-3p 6mer3-8 AGCTGT X 5877095 5877100 - X_5877095_5877100_- 0.999999995 0.884596994 0.942298494 0.081602244 CG3016 FBtr0343537|FBtr0070828 5876998|5876998 5877429|5877429 X - 5877080 5877119 3'utr CG3016 FlyBase G64998.1 AAATTCATGCCGTGCTTTTAGCTGTCTGTATTTAGCAATG 11 5877102 0.647605168 7 11 111 1 1.230448921 0.470588235 0.272727273 0.529411765 11 0 0 17 X:5877080-5877119 6 CG3016 FBtr0343537|FBtr0070828 5876998|5876998 5877429|5877429 AGCTGT 6mer3-8 dme-miR-1008-3p X - 5877092 5877132 3'utr CG3016 FlyBase G48981.1 TTTTAAGAATTCCAAATTCATGCCGTGCTTTTAGCTGTCTG 7 5877102 0.98989689 3 5 52 0.875 0.84509804 0 0.142857143 0.25 7 1 0 7 X:5877092-5877132 6 7.5 3684 FBgn0029819 234.6666667 12.53666667 19.16 0.031960227 0.598245148 0.391440501 2 2 2 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 5877399 5877405 - X_5877399_5877405_- 0.61509409 0.629312088 0.622203089 0.010053644 CG3016 FBtr0343537|FBtr0070828 5876998|5876998 5877429|5877429 X - 5877327 5877461 stop_codon CG3016 FlyBase G65001.1 GTGGCCAGCAGAGGCAGCTAAATCTGCGCTAGTCAGGTGTAGGTCGTCGGTATTATTCTAGTCCATACTTTTGATGTGATGAATATGAATATCCGAAACCAAATCCTTTTCGTCGAACGGTGGCCATAGCAAACA 103 5877406 0.802965481 14 101 895 0.976377953 1.792391689 0.196850394 0.174757282 0.330708661 103 2 1 124 X:5877327-5877461 7 CG3016 FBtr0343537|FBtr0070828 5876998|5876998 5877429|5877429 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X - 5877378 5877461 stop_codon CG3016 FlyBase G48985.1 GTGGCCAGCAGAGGCAGCTAAATCTGCGCTAGTCAGGTGTAGGTCGTCGGTATTATTCTAGTCCATACTTTTGATGTGATGAAT 41 5877406 0.988379341 9 41 372 1 1.799340549 0.253968254 0.463414634 0.650793651 41 0 0 63 X:5877378-5877461 7 57 3685 FBgn0029819 234.6666667 12.53666667 19.16 0.242897727 4.546663122 2.974947808 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA X 5883108 5883115 + X_5883108_5883115_+ 0.637169677 0.633605151 0.635387414 0.002520482 CG16721 FBtr0339948|FBtr0339948|FBtr0339948|FBtr0345313|FBtr0345313|FBtr0345313|FBtr0070821|FBtr0070821|FBtr0070821 5882788|5882788|5882788|5882788|5882788|5882788|5882788|5882788|5882788 5883391|5883391|5883391|5883391|5883391|5883391|5883391|5883391|5883391 X + 5883041 5883212 3'utr CG16721 FlyBase G58998.1 AATCCCCCTGCAAAAAAGCCAGTGGGATCCGAGGCATCTGAAAGGAATCAAAAATGTGCTGGAGCGTCTGTGATAACAAGAATATTCAACACAAAATTCAAATTTTTGGGGGTTAAGAAAAGTGAACTCGTGAATTATGTGTGCTCCTCAATTTTCGTAATGTAAACCCCCT 116 5883107 0.982662307 22 107 773 0.918518519 1.491361694 0.066666667 0.146551724 0.266666667 116 8 3 124 X:5883041-5883212 8 CG16721 FBtr0070821|FBtr0070821|FBtr0070821|FBtr0345313|FBtr0345313|FBtr0345313|FBtr0339948|FBtr0339948|FBtr0339948 5882788|5882788|5882788|5882788|5882788|5882788|5882788|5882788|5882788 5883391|5883391|5883391|5883391|5883391|5883391|5883391|5883391|5883391 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X + 5883083 5883120 3'utr CG16721 FlyBase G44629.1 AGGAATCAAAAATGTGCTGGAGCGTCTGTGATAACAAG 43 5883107 0.719263795 5 39 229 0.919354839 1.755874856 0.080645161 0.325581395 0.532258065 43 5 0 57 X:5883083-5883120 8 61 3686 FBgn0029820 507.81 24.94 37.79666667 0.120123668 2.445870088 1.613898933 1 1 1 0.2 dme-miR-970-3p 6mer2-7 CTTATG X 5904390 5904395 + X_5904390_5904395_+ 0.872127103 0.675002859 0.773564981 0.139387859 Act5C FBtr0100663|FBtr0070823|FBtr0100662|FBtr0345894 5903827|5903827|5903827|5903827 5904464|5905227|5904788|5905399 X + 5904245 5904463 3'utr Act5C FlyBase G59005.1 AGCTTACACACACACATTCGCGGCATGACAAGGACATCAAGATAAAGAAGAACTTAAAGAAGATATTTCCCAAAGCGCAAAAAGAACACACACACATTGCAAAACACAAACAACACACTAGCGTTTTGTACAATTCGTCAGCAACCTTATGTATTATTTTTTAATTATGATGTAATTATAAACAAAGTGAAACAAAAATATGAAAACAAAAAGGAAAAT 238 5904392 0.956565088 39 219 1672 0.928057554 1.411619706 0.053956835 0.138655462 0.262589928 238 11 9 258 X:5904245-5904463 6 Act5C FBtr0345894|FBtr0100662|FBtr0070823|FBtr0100663 5903827|5903827|5903827|5903827 5905399|5904788|5905227|5904464 CTTATG 6mer2-7 dme-miR-970-3p X + 5904248 5904459 3'utr Act5C FlyBase G44637.1 TTACACACACACATTCGCGGCATGACAAGGACATCAAGATAAAGAAGAACTTAAAGAAGATATTTCCCAAAGCGCAAAAAGAACACACACACATTGCAAAACACAAACAACACACTAGCGTTTTGTACAATTCGTCAGCAACCTTATGTATTATTTTTTAATTATGATGTAATTATAAACAAAGTGAAACAAAAATATGAAAACAAAAAGGA 135 5904392 0.980176313 33 123 961 0.921052632 1.544068044 0.036842105 0.311111111 0.510526316 135 11 4 175 X:5904248-5904459 6 87.5 3687 FBgn0000042 40624.21333 2527.44 3863.87 0.002153888 0.034620011 0.022645689 -2 -2 -2 0.2 dme-miR-999-3p 6mer3-8 AGTTAA X 5910741 5910746 + X_5910741_5910746_+ 0.999973618 0.999948838 0.999961228 1.75E-05 CG12236 FBtr0070826 5910640 5911789 X + 5910620 5910825 stop_codon CG12236 FlyBase G59018.1 GGCCATCAAGACGGAGAACTGATGCGTCTTCATAAGTCTCGGTCGCCTGCGAGCCGCATCTGGATCTGCAACTGCATCTGGATTGAGATCGATAGGATATACGGATAGGGGAGAGAGATATAGTTAATTACGTCCAGCTTAGCGAGCAGCCAGCAAAACCAATCAACCCAACCAGCCCATTCCCTCGTGTTTCGATCAAAGGCCCC 82 5910740 0.977207903 21 75 494 0.913043478 1.924279286 0.141304348 0.085365854 0.184782609 82 8 0 84 X:5910620-5910825 6 CG12236 FBtr0070826 5910640 5911789 AGTTAA 6mer3-8 dme-miR-999-3p X + 5910684 5910825 3'utr CG12236 FlyBase G44649.1 TCTGCAACTGCATCTGGATTGAGATCGATAGGATATACGGATAGGGGAGAGAGATATAGTTAATTACGTCCAGCTTAGCGAGCAGCCAGCAAAACCAATCAACCCAACCAGCCCATTCCCTCGTGTTTCGATCAAAGGCCCC 43 5910747 0.973826228 11 43 267 1 1.838849091 0.028985507 0.465116279 0.666666667 43 0 0 69 X:5910684-5910825 6 43.5 3688 FBgn0029822 534.9233333 22.61666667 34.62 0.081320065 1.923360354 1.256499133 1 -6 -2.5 0.2 dme-miR-33-5p 7mer-A1 AATGCAA X 5910857 5910863 + X_5910857_5910863_+ 0.782447805 0.782865642 0.782656723 0.000295429 CG12236 FBtr0070826 5910640 5911789 X + 5910826 5910876 3'utr CG12236 FlyBase G59019.1 AAAACGAAAACTAGCCAAATTTGTCAACTTAAATGCAAAGCAGATAGGAGT 14 5910855 0.952703307 5 12 81 0.857142857 1.079181246 0.214285714 0 0 14 2 0 12 X:5910826-5910876 7 CG12236 FBtr0070826 5910640 5911789 AATGCAA 7mer-A1 dme-miR-33-5p X + 5910827 5910875 3'utr CG12236 FlyBase G44650.1 AAACGAAAACTAGCCAAATTTGTCAACTTAAATGCAAAGCAGATAGGAG 7 5910855 0.891859222 3 6 35 0.769230769 1 0.076923077 0.428571429 0.692307692 7 3 0 10 X:5910827-5910875 7 8 3689 FBgn0029822 534.9233333 22.61666667 34.62 0.014955414 0.353721444 0.2310803 2 2 2 0.2 dme-miR-283-5p 8mer-A1 TGATATTA X 5911354 5911361 + X_5911354_5911361_+ 0.588162125 0.590733656 0.58944789 0.001818396 CG12236 FBtr0070826 5910640 5911789 X + 5911290 5911360 3'utr CG12236 FlyBase G59023.1 CTTAGCCCATATCGATCACTTTATTTTAGCTCTTAAACAACCTCATATGTATTTTTTGAAACTCTGATATT 16 5911333 0.991304349 9 15 163 0.941176471 0.903089987 0.058823529 0.0625 0.117647059 16 0 1 16 X:5911290-5911360 7 CG12236 FBtr0070826 5910640 5911789 TGATATTA 8mer-A1 dme-miR-283-5p X + 5911307 5911434 3'utr CG12236 FlyBase G44654.1 ACTTTATTTTAGCTCTTAAACAACCTCATATGTATTTTTTGAAACTCTGATATTATTCAGTTTTTGTATATAGAGCTAGGCAACTTAACCTAAATTAAGGTAAACCCAAAAACAAAGTCCCCCCTCCA 17 5911334 0.986087962 11 16 140 1 1.322219295 0.285714286 0.235294118 0.380952381 17 0 0 21 X:5911307-5911434 8 1.5 3690 FBgn0029822 534.9233333 22.61666667 34.62 0.00280414 0.066322771 0.043327556 21 20 20.5 0.2 dme-miR-1012-3p 6mer3-8 TTGACT X 5911615 5911620 + X_5911615_5911620_+ 0.983669502 0.791751039 0.887710271 0.135706873 CG12236 FBtr0070826 5910640 5911789 X + 5911463 5911701 3'utr CG12236 FlyBase G59025.1 AGGAAGGAAGCTGTGTACTTTGCTCACAAGCAGAGATCAGGAGAATATGAGAAAATATATATATTACCCCTTGTGTACAAATTTAAATACGATTTAATCCAATTACCCGGCGCGCTTTTGACCATCTGTGTTCAGCATTAGAGCGTTGGCAGTTGACTGTAAATTAGCTAAATTAGTTTTAGTTTAGTTTAAGACACCACAAATTCGATTGGACATAGTTTAGTTATTCGGTGTAACTT 65 5911616 0.981049885 27 65 467 1 1.826074803 0.104477612 0.030769231 0.059701493 65 0 0 67 X:5911463-5911701 6 CG12236 FBtr0070826 5910640 5911789 TTGACT 6mer3-8 dme-miR-1012-3p X + 5911553 5911636 3'utr CG12236 FlyBase G44657.1 GATTTAATCCAATTACCCGGCGCGCTTTTGACCATCTGTGTTCAGCATTAGAGCGTTGGCAGTTGACTGTAAATTAGCTAAATT 33 5911616 0.943335195 13 31 215 0.916666667 1.041392685 0.0625 0.333333333 0.541666667 33 1 3 44 X:5911553-5911636 6 24 3691 FBgn0029822 534.9233333 22.61666667 34.62 0.044866243 1.061164333 0.693240901 -1 -1 -1 0.2 dme-miR-932-5p 6mer3-8 GGAATT X 5913105 5913110 - X_5913105_5913110_- 0.99219467 0.999676558 0.995935614 0.005290502 CG3011 FBtr0290235|FBtr0070827|FBtr0345317 5913065|5913065|5913065 5913196|5913196|5913196 X - 5913074 5913130 3'utr CG3011 FlyBase G65006.1 GCTTGTTAATATCATAAGTGGGAATTAGTAGTTAAGCCATTAAACGCATTTCAGTTT 17 5913116 0.989521122 6 15 147 0.9 0.954242509 0.3 0.117647059 0.25 17 1 1 18 X:5913074-5913130 6 CG3011 FBtr0070827|FBtr0345317|FBtr0290235 5913065|5913065|5913065 5913196|5913196|5913196 GGAATT 6mer3-8 dme-miR-932-5p X - 5913075 5913148 3'utr CG3011 FlyBase G48988.1 TACATCCTCGAAAAGTCCGCTTGTTAATATCATAAGTGGGAATTAGTAGTTAAGCCATTAAACGCATTTCAGTT 15 5913116 0.980095211 10 15 110 1 1.342422681 0 0.466666667 0.636363636 15 0 0 22 X:5913075-5913148 6 13 3692 FBgn0029823 724.9866667 47.58333333 72.74 0.017931364 0.273204904 0.178718724 6 6 6 0.2 dme-bantam-3p 6mer3-8 TGATCT X 5941596 5941601 + X_5941596_5941601_+ 0.991162752 0.998557003 0.994859878 0.005228489 CG3726 FBtr0343051|FBtr0070858 5941403|5941362 5941852|5941664 X + 5941492 5941622 3'utr CG3726 FlyBase G59037.1 AAAGACAGCTAGACGAGGCTAGTTTTGGATCCTGAGTAATGCTTTCCTGAATCCTGAATTCCCACATTAATGTGTTGTTCCCATCGGTGGGTCACAACTATAACTGATCTACACATTTAGGATCTTATTAT 29 5941596 0.745693469 15 28 195 0.96875 1.491361694 0.0625 0.103448276 0.1875 29 1 0 31 X:5941492-5941622 6 CG3726 FBtr0343051|FBtr0070858 5941403|5941362 5941852|5941664 TGATCT 6mer3-8 dme-bantam-3p X + 5941529 5941623 3'utr CG3726 FlyBase G44662.1 AATGCTTTCCTGAATCCTGAATTCCCACATTAATGTGTTGTTCCCATCGGTGGGTCACAACTATAACTGATCTACACATTTAGGATCTTATTATT 16 5941598 0.985706042 8 14 126 0.888888889 1.204119983 0.111111111 0.125 0.222222222 16 2 0 16 X:5941529-5941623 6 8.5 3693 FBgn0029824 462.5733333 18.42 28.35333333 0.018375465 0.46145494 0.299788385 0 -2 -1 0.2 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA X 5944411 5944418 + X_5944411_5944418_+ 0.625324017 0.624431517 0.624877767 0.000631093 CG12728 FBtr0343052 5944386 5945250 X + 5944260 5944448 stop_codon CG12728 FlyBase G59047.1 AGTCCGATCAGAATTGGGATTTAATTCTTCGAACTGTGCTGGAAGATATCAAAGCCGTACTGATTTACTCAACTGAACGCATCGAAAAAGCGATCCAGAGCTATATCAATAAGTTAGCGCAAAAATAATTTGGAAACGATCTCATTCTAAATGGTGCTACAAGCAAAACTTCACACTTAGTACATACGT 213 5944410 0.982954048 25 191 1452 0.911290323 1.655138435 0.177419355 0.14084507 0.262096774 213 18 4 226 X:5944260-5944448 8 CG12728 FBtr0070859|FBtr0343052 5944386|5944386 5944622|5945250 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" X + 5944287 5944441 stop_codon CG12728 FlyBase G44671.1 TTCGAACTGTGCTGGAAGATATCAAAGCCGTACTGATTTACTCAACTGAACGCATCGAAAAAGCGATCCAGAGCTATATCAATAAGTTAGCGCAAAAATAATTTGGAAACGATCTCATTCTAAATGGTGCTACAAGCAAAACTTCACACTTAGTA 125 5944410 0.855694508 20 113 848 0.920903955 1.367089564 0.169491525 0.304 0.508474576 125 8 6 163 X:5944287-5944441 8 76 3694 FBgn0029825 316.1666667 16.35666667 25.15 0.240379547 4.646423477 3.021868787 1 1 1 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 5944791 5944796 + X_5944791_5944796_+ 0.970087695 0.96914543 0.969616562 0.000666307 CG12728 FBtr0343052 5944386 5945250 X + 5944766 5944823 3'utr CG12728 FlyBase G59050.1 AGTGTTGTAGATTTTAAAACGTCTTACCAAAACACCCTCAGTACACAAACAAGTTGAG 6 5944789 0.948365264 3 4 29 0.857142857 0.77815125 0.285714286 0.166666667 0.285714286 6 1 0 6 X:5944766-5944823 6 CG12728 FBtr0343052 5944386 5945250 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 5944758 5944806 3'utr CG12728 FlyBase G44675.1 CAATGTATAGTGTTGTAGATTTTAAAACGTCTTACCAAAACACCCTCAG 10 5944790 0.916403571 4 10 40 1 1.204119983 0.125 0.6 0.75 10 0 0 16 X:5944758-5944806 6 6.5 3695 FBgn0029825 316.1666667 16.35666667 25.15 0.020558777 0.397391482 0.258449304 2 1 1.5 0.2 dme-miR-33-5p 7mer-m8 CAATGCA X 5944970 5944976 + X_5944970_5944976_+ 0.548520889 0.596312535 0.572416712 0.033793764 CG12728 FBtr0343052 5944386 5945250 X + 5944927 5944995 3'utr CG12728 FlyBase G59052.1 CGACCGATTAGTCAGGGCTTTCCAGCGGTTATAACCTCCTGATCAATGCATTTTATGTTAAATATTTTT 55 5944969 0.809215622 11 52 463 0.940298507 1.322219295 0.014925373 0.163636364 0.313432836 55 2 2 63 X:5944927-5944995 7 CG12728 FBtr0343052 5944386 5945250 CAATGCA 7mer-m8 dme-miR-33-5p X + 5944935 5944990 3'utr CG12728 FlyBase G44677.1 TAGTCAGGGCTTTCCAGCGGTTATAACCTCCTGATCAATGCATTTTATGTTAAATA 38 5944969 0.820869976 8 36 286 0.953125 1.183269844 0.03125 0.447368421 0.671875 38 0 3 61 X:5944935-5944990 7 43 3696 FBgn0029825 316.1666667 16.35666667 25.15 0.136004217 2.628897493 1.709741551 1 1 1 0.2 dme-bantam-3p 6mer3-8 TGATCT X 5945238 5945243 + X_5945238_5945243_+ 0.907074369 0.997980662 0.952527515 0.064280461 CG12728 FBtr0343052 5944386 5945250 X + 5945219 5945256 3'utr CG12728 FlyBase G59054.1 GGTGGGTCACAACTATAACTGATCTACACATTTAGGAT 6 5945237 0.965830062 4 6 33 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 X:5945219-5945256 6 CG12728 FBtr0343052 5944386 5945250 TGATCT 6mer3-8 dme-bantam-3p X + 5945202 5945247 3'utr CG12728 FlyBase G44679.1 AATGTGTTGTTCCCATCGGTGGGTCACAACTATAACTGATCTACAC 11 5945239 0.721349094 5 10 63 0.933333333 0.84509804 0 0.363636364 0.533333333 11 0 1 14 X:5945202-5945247 6 7 3697 FBgn0029825 316.1666667 16.35666667 25.15 0.022140221 0.427960057 0.27833002 1 -1 0 0.2 dme-miR-988-3p 6mer3-8 ACAAGG X 5947522 5947527 + X_5947522_5947527_+ 0.999972961 0.784658424 0.892315692 0.152250414 CG32756 FBtr0070860|FBtr0343295 5947414|5947414 5947851|5948353 X + 5947487 5947544 3'utr CG32756 FlyBase G59066.1 TTTTTTTTTTGAGATAAAAACAAATCCTCAGTGATACAAGGATAAAAGACATGATTCC 20 5947520 0.973748021 7 16 80 0.826086957 0.977723605 0.217391304 0.15 0.260869565 20 3 1 19 X:5947487-5947544 6 CG32756 FBtr0343295|FBtr0070860 5947414|5947414 5948353|5947851 ACAAGG 6mer3-8 dme-miR-988-3p X + 5947502 5947560 3'utr CG32756 FlyBase G44688.1 AAAAACAAATCCTCAGTGATACAAGGATAAAAGACATGATTCCATTTGTTGATTAGGTA 11 5947521 0.949583396 5 9 56 0.947368421 1.255272505 0.315789474 0.454545455 0.684210526 11 1 0 18 X:5947502-5947560 6 13.5 3698 FBgn0052756 250.4866667 13.61 20.71333333 0.053895084 0.991917708 0.651754104 2 1 1.5 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 5947639 5947644 + X_5947639_5947644_+ 0.901871832 0.991022418 0.946447125 0.063038994 CG32756 FBtr0070860|FBtr0343295 5947414|5947414 5947851|5948353 X + 5947590 5947663 3'utr CG32756 FlyBase G59067.1 AAATGAAACAAAACAATGTATAGTGTTGTAGATTTTAAAACGACATCTTACCAAAACACCCTCAGTACACAAAC 36 5947638 0.952006227 9 34 152 0.974358974 1.579783597 0.051282051 0.083333333 0.153846154 36 1 0 38 X:5947590-5947663 6 CG32756 FBtr0343295|FBtr0070860 5947414|5947414 5948353|5947851 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 5947627 5947663 3'utr CG32756 FlyBase G44689.1 AAACGACATCTTACCAAAACACCCTCAGTACACAAAC 21 5947638 0.702096727 3 19 63 0.942857143 1.51851394 0.028571429 0.476190476 0.685714286 21 2 0 33 X:5947627-5947663 6 25 3699 FBgn0052756 250.4866667 13.61 20.71333333 0.099805712 1.836884644 1.206952044 1 1 1 0.2 dme-miR-283-5p 8mer-A1 TGATATTA X 5947724 5947731 + X_5947724_5947731_+ 0.591120058 0.590052672 0.590586365 0.000754766 CG32756 FBtr0070860|FBtr0343295 5947414|5947414 5947851|5948353 X + 5947686 5947748 3'utr CG32756 FlyBase G59068.1 AGCAGCAACTAACTCCTATCTCTATGGAACATATCGACTGATATTAAAATGCGTCCGATTAGT 152 5947727 0.693801718 11 145 926 0.960591133 2.290034611 0.009852217 0.276315789 0.458128079 152 8 0 195 X:5947686-5947748 8 CG32756 FBtr0343295|FBtr0070860 5947414|5947414 5948353|5947851 TGATATTA 8mer-A1 dme-miR-283-5p X + 5947695 5947791 3'utr CG32756 FlyBase G44690.1 TAACTCCTATCTCTATGGAACATATCGACTGATATTAAAATGCGTCCGATTAGTCACGGCTTTCCAACGGTTATAGCCTCCTGATCAATGCATTTTA 131 5947727 0.616512411 12 125 830 0.967032967 1.944482672 0.027472527 0.290076336 0.489010989 131 5 1 176 X:5947695-5947791 8 135 3700 FBgn0052756 250.4866667 13.61 20.71333333 0.538950842 9.919177076 6.517541036 -3 -3 -3 0.2 dme-miR-1003-3p 7mer-A1 TGTGAGA X 6008577 6008583 - X_6008577_6008583_- 0.688818775 0.692804126 0.690811451 0.002818033 mab-21 FBtr0070890 6008181 6008807 X - 6008374 6008654 3'utr mab-21 FlyBase G65024.1 TCTACAACTAAAGACAAAGGATCGCAAGGATCAAGGGCGCTGGGAGGGTCGAAGCTGGAGAAGGAGAAATGTGTGAGAAAGATAGAGAGAAAGCAGTGAAATTGTAACCCAAATACTATTTGATATTTCGCTAGATCGTAACTTAAGTTTAGGTGCTTTCGAAAAGTATACGCCGCTTACAGAGTTTCCTATAATTAGAGCATACTTAGTGTTATCCATTTAGATCGTCATCGTCGCAAAACGCACAAAAGTTACCAACTAGTTACATTTGTATGTACGAC 1232 6008585 0.955179246 64 1147 6608 0.932238193 2.134177108 0.248459959 0.151785714 0.284736482 1232 90 9 1362 X:6008374-6008654 7 mab-21 FBtr0070890 6008181 6008807 TGTGAGA 7mer-A1 dme-miR-1003-3p X - 6008360 6008665 3'utr mab-21 FlyBase G49003.1 GATTTTTTTTTTCTACAACTAAAGACAAAGGATCGCAAGGATCAAGGGCGCTGGGAGGGTCGAAGCTGGAGAAGGAGAAATGTGTGAGAAAGATAGAGAGAAAGCAGTGAAATTGTAACCCAAATACTATTTGATATTTCGCTAGATCGTAACTTAAGTTTAGGTGCTTTCGAAAAGTATACGCCGCTTACAGAGTTTCCTATAATTAGAGCATACTTAGTGTTATCCATTTAGATCGTCATCGTCGCAAAACGCACAAAAGTTACCAACTAGTTACATTTGTATGTACGACATTTTTTTTTTTTT 825 6008585 0.966336813 55 753 4017 0.915213946 1.916453949 0.270206022 0.375757576 0.591917591 825 94 13 1155 X:6008360-6008665 7 536.5 3701 FBgn0029003 3 0.19 0.303333333 178.8333333 2823.684211 1768.681319 2 2 2 0.2 dme-miR-14-3p 8mer-A1 AAGACTGA X 6035871 6035878 - X_6035871_6035878_- 0.599113167 0.641305411 0.620209289 0.029834391 rux FBtr0307288|FBtr0070889 6035751|6035751 6035992|6035992 X - 6035849 6035893 3'utr rux FlyBase G65031.1 CGTAATTATTTGAACAAGACTGATTGCACCCGCTTTGGTTCCGCT 68 6035870 0.719913162 9 60 454 0.897435897 1.544068044 0.012820513 0.117647059 0.230769231 68 7 1 70 X:6035849-6035893 8 rux FBtr0307288|FBtr0070889 6035751|6035751 6035992|6035992 AAGACTGA 8mer-A1 dme-miR-14-3p X - 6035850 6035893 3'utr rux FlyBase G49011.1 CGTAATTATTTGAACAAGACTGATTGCACCCGCTTTGGTTCCGC 66 6035870 0.689173382 6 57 431 0.852941176 1.939519253 0.068627451 0.46969697 0.656862745 66 15 0 87 X:6035850-6035893 8 66.5 3702 FBgn0003302 80.70666667 7.456666667 11.36 0.823971584 8.91819401 5.853873239 -8 -8 -8 0.2 dme-miR-190-5p 6mer2-7 CATATC X 611021 611026 - X_611021_611026_- 0.882663796 0.964334497 0.923499146 0.057749906 CG13366 FBtr0339433|FBtr0110791|FBtr0339431|FBtr0339432|FBtr0070161|FBtr0339430 610547|610547|610547|610547|610547|610547 611251|611251|611251|611251|611251|611251 X - 610953 611093 3'utr CG13366 FlyBase G63851.1 TCTCCAATTCCTCTAGCTTGTACACTTTTTTCCTGTAAAGCCTCTTCTGCTTTAGTGCGTCTGATTCCATATCCTTGCCCATGTATAATGGTCGTCCGATGCAGCGCCCCATATTCAGACATCGCTACTTTTAAATATCAT 22 611040 0.989923359 14 19 196 0.923076923 1.079181246 0.153846154 0.181818182 0.307692308 22 1 1 24 X:610953-611093 6 CG13366 FBtr0110791|FBtr0339433|FBtr0339430|FBtr0070161|FBtr0339432|FBtr0339431 610547|610547|610547|610547|610547|610547 611251|611251|611251|611251|611251|611251 CATATC 6mer2-7 dme-miR-190-5p X - 610981 611067 3'utr CG13366 FlyBase G48128.1 TTTTTCCTGTAAAGCCTCTTCTGCTTTAGTGCGTCTGATTCCATATCCTTGCCCATGTATAATGGTCGTCCGATGCAGCGCCCCATA 12 611038 0.986741672 7 11 111 0.9375 1.176091259 0 0.333333333 0.5 12 1 0 15 X:610981-611067 6 6.5 3703 FBgn0025633 323.6666667 8.64 13.25333333 0.020082389 0.752314815 0.490442656 14 12 13 0.2 dme-miR-8-3p 7mer-A1 AGTATTA X 6223122 6223128 - X_6223122_6223128_- 0.818454091 0.823049054 0.820751573 0.003249156 sqh FBtr0339502|FBtr0339503|FBtr0070877|FBtr0339504|FBtr0345294 6223059|6223059|6223059|6223059|6223059 6223406|6223406|6223406|6223406|6223406 X - 6223103 6223220 3'utr sqh FlyBase G65056.2 AGTAGCCAACACCAGCGATTGTTATGTACGACAGTGTAGTGTGTGAGATGTTGGTGCCAGATAACACGATTTCCCGAAAAACTCCTTTCATAAGTATTAACTCATTGAATATACATAT 78 6223130 0.762012548 24 73 558 0.955555556 1.934498451 0.088888889 0.128205128 0.244444444 78 4 0 86 X:6223103-6223220 7 sqh FBtr0345294|FBtr0070877|FBtr0339504|FBtr0339502|FBtr0339503 6223059|6223059|6223059|6223059|6223059 6223406|6223406|6223406|6223406|6223406 AGTATTA 7mer-A1 dme-miR-8-3p X - 6223068 6223188 3'utr sqh FlyBase G49023.1 AGTGTAGTGTGTGAGATGTTGGTGCCAGATAACACGATTTCCCGAAAAACTCCTTTCATAAGTATTAACTCATTGAATATACATATATATTACCTATATACAAATACATACTTATACAAGA 48 6223130 0.985277353 16 44 360 0.942857143 1.51851394 0.185714286 0.291666667 0.514285714 48 3 1 66 X:6223068-6223188 7 38 3704 FBgn0003514 2178.836667 260.73 395.3566667 0.0174405 0.14574464 0.096115744 2 2 2 0.2 dme-miR-252-5p 7mer-m8 GTACTTA X 6223245 6223251 - X_6223245_6223251_- 0.56248242 0.580673158 0.571577789 0.012862838 sqh FBtr0339502|FBtr0339503|FBtr0070877|FBtr0339504|FBtr0345294 6223059|6223059|6223059|6223059|6223059 6223406|6223406|6223406|6223406|6223406 X - 6223232 6223290 3'utr sqh FlyBase G65057.1 TGGTTTCGCGCCTTCTGTTCTTTGATTCCTGATAATCCTGTACTTATCCGTGCATTTGA 34 6223252 0.743927985 11 31 313 0.921052632 1.544068044 0.263157895 0.117647059 0.210526316 34 3 0 35 X:6223232-6223290 7 sqh FBtr0345294|FBtr0070877|FBtr0339504|FBtr0339502|FBtr0339503 6223059|6223059|6223059|6223059|6223059 6223406|6223406|6223406|6223406|6223406 GTACTTA 7mer-m8 dme-miR-252-5p X - 6223197 6223299 3'utr sqh FlyBase G49024.1 TTTTTTTTTTGGTTTCGCGCCTTCTGTTCTTTGATTCCTGATAATCCTGTACTTATCCGTGCATTTGAATTAAACAAAAAGTAGCCAACACCAGCGATTGTTA 28 6223252 0.989476832 14 27 256 0.973684211 1.568201724 0.368421053 0.321428571 0.5 28 1 0 37 X:6223197-6223299 7 19.5 3705 FBgn0003514 2178.836667 260.73 395.3566667 0.00894973 0.074790013 0.049322553 1 1 1 0.2 dme-miR-305-3p 8mer-m1 ATGTGCCG X 6232071 6232078 + X_6232071_6232078_+ 0.61087441 0.605452421 0.608163415 0.003833933 CG14446 FBtr0339696|FBtr0307164|FBtr0307165|FBtr0339697 6231056|6231056|6231056|6231317 6236218|6236004|6233166|6233166 X + 6232044 6232122 5'utr CG14446 FlyBase G59085.1 GTTAAGAGAAAGAGGAGAGTTTCCAAAATGTGCCGGGCACCGCTCCCAAAAGTCGCTAGAACTTAAAAACTGAATAATA 20 6232073 0.941481757 8 18 74 0.9 1.255272505 0.05 0 0 20 2 0 18 X:6232044-6232122 8 CG14446 FBtr0339697|FBtr0307165|FBtr0307164|FBtr0339696 6231317|6231056|6231056|6231056 6233166|6233166|6236004|6236218 ATGTGCCG 8mer-m1 dme-miR-305-3p X + 6232061 6232104 5'utr CG14446 FlyBase G44702.1 AGTTTCCAAAATGTGCCGGGCACCGCTCCCAAAAGTCGCTAGAA 8 6232072 0.917495496 3 6 22 0.888888889 0.903089987 0.111111111 0.125 0.222222222 8 1 0 8 X:6232061-6232104 8 9.5 3706 FBgn0262730 931.1666667 14.78666667 22.41333333 0.010202255 0.642470694 0.423854848 -2 -1 -1.5 0.2 dme-miR-1007-3p 7mer-m8 TGAGCTT X 6232393 6232399 + X_6232393_6232399_+ 0.591807214 0.59335036 0.592578787 0.001091207 CG14446 FBtr0339696|FBtr0307164|FBtr0307165|FBtr0339697 6231056|6231056|6231056|6231317 6236218|6236004|6233166|6233166 X + 6232366 6232430 5'utr CG14446 FlyBase G59087.1 AGATCACAAATAATATATAGACGCTTATGAGCTTTATTTGATCGATTGCATTGAAAAGGAAGCAG 54 6232393 0.781181534 7 51 419 0.956521739 1.51851394 0.420289855 0.240740741 0.405797101 54 2 1 66 X:6232366-6232430 7 CG14446 FBtr0339697|FBtr0307165|FBtr0307164|FBtr0339696 6231317|6231056|6231056|6231056 6233166|6233166|6236004|6236218 TGAGCTT 7mer-m8 dme-miR-1007-3p X + 6232373 6232445 5'utr CG14446 FlyBase G44703.1 AAATAATATATAGACGCTTATGAGCTTTATTTGATCGATTGCATTGAAAAGGAAGCAGCTAAAAGCAGAACAG 49 6232393 0.985362777 5 48 396 0.987951807 1.612783857 0.457831325 0.469387755 0.686746988 49 0 1 82 X:6232373-6232445 7 41 3707 FBgn0262730 931.1666667 14.78666667 22.41333333 0.044030786 2.77276826 1.829268293 0 0 0 0.2 dme-bantam-3p 6mer2-7 GATCTC X 6233535 6233540 + X_6233535_6233540_+ 0.996218691 0.567301935 0.781760313 0.303289978 CG14446 FBtr0339696|FBtr0307164 6231056|6231056 6236218|6236004 X + 6233511 6233628 3'utr CG14446 FlyBase G59094.1 AGAGTCTTTGAATTAACTGAAATAGATCTCGACTTGGTCTTATAGCACGCAAACGCACTGTACCGTATTATTATACTTAGTCCTGAGTTGCTCCCTATCGATCTAAGGACTGCAAAGA 8 6233531 0.97316662 8 8 59 1 0.903089987 0 0 0 8 0 0 8 X:6233511-6233628 6 CG14446 FBtr0307164|FBtr0339696 6231056|6231056 6236004|6236218 GATCTC 6mer2-7 dme-bantam-3p X + 6233520 6233545 3'utr CG14446 FlyBase G44709.1 GAATTAACTGAAATAGATCTCGACTT 4 6233533 0.845280577 2 2 22 0.8 0.602059991 0 0.25 0.4 4 1 0 4 X:6233520-6233545 6 4 3708 FBgn0262730 931.1666667 14.78666667 22.41333333 0.004295686 0.270513977 0.178465199 4 2 3 0.2 dme-miR-34-5p 8mer-A1 CACTGCCA X 6233806 6233813 + X_6233806_6233813_+ 0.677262778 0.6770707 0.677166739 0.000135835 CG14446 FBtr0339696|FBtr0307164 6231056|6231056 6236218|6236004 X + 6233783 6234107 3'utr CG14446 FlyBase G59096.1 CACACACACTCTCAGTCGAGCTGCACTGCCATTGGTGAAAGTGAAAATGAGATTTAGGCCTATTGAAGCTTCCAGCATTTACCAGTGCCATAACTTTATAACTTTATATAACTTTACCCGCACGCCCAGCCCAGCCCAGTATGCCGATCAATCCGATCGATTGATCTCGGCTAGCATCGAGCTTAGCACTAGCTTTCTTCCGAGCTTGCTTGTTGGACAGACAGTGAGAACGAACGAAGAGACATCAGCCTCCATCCATTAAAGAACTTAGTCTTAGCCGATCTGGAGTCCAAAATTTCATTGGAAATTCCGCCATGCGGATCGG 125 6233814 0.97123952 35 119 742 0.95483871 1.86923172 0.367741935 0.2 0.35483871 125 6 1 148 X:6233783-6234107 8 CG14446 FBtr0307164|FBtr0339696 6231056|6231056 6236004|6236218 CACTGCCA 8mer-A1 dme-miR-34-5p X + 6233761 6233894 3'utr CG14446 FlyBase G44711.1 ATCGAAACATACACCAACACACCACACACACTCTCAGTCGAGCTGCACTGCCATTGGTGAAAGTGAAAATGAGATTTAGGCCTATTGAAGCTTCCAGCATTTACCAGTGCCATAACTTTATAACTTTATATAAC 44 6233814 0.971073238 12 42 245 0.948051948 1.86332286 0.480519481 0.454545455 0.688311688 44 4 0 73 X:6233761-6233894 8 34 3709 FBgn0262730 931.1666667 14.78666667 22.41333333 0.036513335 2.299368801 1.516954194 -8 -8 -8 0.2 dme-miR-33-5p 8mer-A1 CAATGCAA X 6234242 6234249 + X_6234242_6234249_+ 0.633334569 0.590061985 0.611698277 0.030598349 CG14446 FBtr0339696|FBtr0307164 6231056|6231056 6236218|6236004 X + 6234131 6234266 3'utr CG14446 FlyBase G59097.1 GGCGTGAGGCGATTGATGACTATTAGCATTTTTAATCTAGACAAATGCTTGGCTTCAATTCGCGGATCGGCTTAATCCTTCTTGTACTTGTATGTATGTGTTTAACGATTCCAATGCAAAGACTTTTATATATCTT 66 6234256 0.985656986 16 62 513 0.949367089 1.875061263 0.151898734 0.151515152 0.291139241 66 4 0 75 X:6234131-6234266 8 CG14446 FBtr0307164|FBtr0339696 6231056|6231056 6236004|6236218 CAATGCAA 8mer-A1 dme-miR-33-5p X + 6234179 6234274 3'utr CG14446 FlyBase G44713.1 TTGGCTTCAATTCGCGGATCGGCTTAATCCTTCTTGTACTTGTATGTATGTGTTTAACGATTCCAATGCAAAGACTTTTATATATCTTTTTTTTTT 62 6234256 0.744168607 13 58 510 0.951807229 1.420505837 0.072289157 0.290322581 0.469879518 62 2 2 79 X:6234179-6234274 8 46 3710 FBgn0262730 931.1666667 14.78666667 22.41333333 0.049400394 3.11091073 2.052349792 -14 -14 -14 0.2 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 6234381 6234388 + X_6234381_6234388_+ 0.63113515 0.631132872 0.631134011 1.56E-06 CG14446 FBtr0339696|FBtr0307164 6231056|6231056 6236218|6236004 X + 6234332 6234424 3'utr CG14446 FlyBase G59098.1 TATTGTTTAGCATGTTTCGACTGCAATTTAAGCCGAATTTTAGATCTTCTCTAGTCAGTTCAAAGCGTTTTTTGTTCGTTTTGTCACGCCCAT 71 6234380 0.986109137 16 62 598 0.894117647 1.579783597 0.164705882 0.183098592 0.317647059 71 8 1 76 X:6234332-6234424 8 CG14446 FBtr0307164|FBtr0339696 6231056|6231056 6236004|6236218 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X + 6234328 6234400 3'utr CG14446 FlyBase G44714.1 ACATTATTGTTTAGCATGTTTCGACTGCAATTTAAGCCGAATTTTAGATCTTCTCTAGTCAGTTCAAAGCGTT 47 6234380 0.989183898 12 41 394 0.904109589 1.217483944 0.191780822 0.446808511 0.643835616 47 4 3 66 X:6234328-6234400 8 53 3711 FBgn0262730 931.1666667 14.78666667 22.41333333 0.056917845 3.584310189 2.364663891 1 1 1 0.2 dme-miR-1008-3p 6mer3-8 AGCTGT X 6234539 6234544 + X_6234539_6234544_+ 0.955368598 0.92612057 0.940744584 0.020681459 CG14446 FBtr0339696|FBtr0307164 6231056|6231056 6236218|6236004 X + 6234513 6234557 3'utr CG14446 FlyBase G59099.1 CTGCCACGCCCCCGCCCCTAAACCTAAGCTGTATGTACTTGTATG 11 6234531 0.898269003 2 10 34 0.909090909 1 0.272727273 0 0 11 1 0 10 X:6234513-6234557 6 CG14446 FBtr0307164|FBtr0339696 6231056|6231056 6236004|6236218 AGCTGT 6mer3-8 dme-miR-1008-3p X + 6234525 6234558 3'utr CG14446 FlyBase G44716.1 CGCCCCTAAACCTAAGCTGTATGTACTTGTATGT 7 6234546 0.982149164 2 6 55 0.818181818 0.954242509 0.363636364 0.571428571 0.727272727 7 2 0 9 X:6234525-6234558 6 6 3712 FBgn0262730 931.1666667 14.78666667 22.41333333 0.00644353 0.405770965 0.267697799 8 -7 0.5 0.2 dme-miR-92b-3p 6mer3-8 GTGCAA X 6240861 6240866 - X_6240861_6240866_- 0.769242623 0.957196748 0.863219686 0.132903619 Rbcn-3A FBtr0303341 6240743 6241463 X - 6240836 6240885 3'utr Rbcn-3A FlyBase G65066.1 TGTCTTTATGTTGAGCTTTGTGCAAAAATTTGTCTGTTGTTGAATCAATC 18 6240868 0.984502225 5 18 152 1 1.361727836 0.260869565 0.277777778 0.434782609 18 0 0 23 X:6240836-6240885 6 Rbcn-3A FBtr0303341 6240743 6241463 GTGCAA 6mer3-8 dme-miR-92b-3p X - 6240812 6240885 3'utr Rbcn-3A FlyBase G49033.1 TGTCTTTATGTTGAGCTTTGTGCAAAAATTTGTCTGTTGTTGAATCAATCAAGATATATGTATACCTAAAACGA 23 6240868 0.986006175 9 22 188 1 1.531478917 0.205882353 0.434782609 0.617647059 23 0 0 34 X:6240812-6240885 6 19 3713 FBgn0023458 2065.706667 22.39 34.44 0.009197821 0.848593122 0.551684088 2 2 2 0.2 dme-miR-305-5p 7mer-A1 GTACAAA X 6274987 6274993 - X_6274987_6274993_- 0.715498306 0.641295262 0.678396784 0.052469444 CG3566 FBtr0305177|FBtr0089869|FBtr0089870 6274970|6274970|6274970 6275335|6276223|6275082 X - 6274975 6275005 3'utr CG3566 FlyBase G65122.1 ACGAAATAAATTGTACAAATTGCTTAAATTA 30 6274995 0.717764319 4 30 173 1 1.653212514 0.533333333 0.366666667 0.577777778 30 0 0 45 X:6274975-6275005 7 CG3566 FBtr0089869|FBtr0089870|FBtr0305177 6274970|6274970|6274970 6276223|6275082|6275335 GTACAAA 7mer-A1 dme-miR-305-5p X - 6274976 6275010 3'utr CG3566 FlyBase G49066.1 TTGACACGAAATAAATTGTACAAATTGCTTAAATT 16 6274995 0.731151875 3 16 87 1 1.255272505 0.277777778 0.125 0.222222222 16 0 0 18 X:6274976-6275010 7 22.5 3714 FBgn0029854 227.9933333 32.42666667 49.59666667 0.098687096 0.693873355 0.45365952 2 2 2 0.2 dme-bantam-3p 7mer-m8 TGATCTC X 6276109 6276115 - X_6276109_6276115_- 0.661611907 0.414667892 0.538139899 0.174615777 CG3566 FBtr0089869 6274970 6276223 X - 6276095 6276135 3'utr CG3566 FlyBase G65126.1 TTCTCCGCTCCCACACGGATTGATCTCCTTATCTCGCTAGA 13 6276107 0.693798181 2 13 88 1 1.113943352 0 0 0 13 0 0 13 X:6276095-6276135 7 CG3566 FBtr0089869 6274970 6276223 TGATCTC 7mer-m8 dme-bantam-3p X - 6276096 6276130 3'utr CG3566 FlyBase G49070.1 CGCTCCCACACGGATTGATCTCCTTATCTCGCTAG 5 6276116 0.867292799 2 5 34 1 0.954242509 0 0.6 0.777777778 5 0 0 9 X:6276096-6276130 7 9 3715 FBgn0029854 227.9933333 32.42666667 49.59666667 0.039474838 0.277549342 0.181463808 -8 1 -3.5 0.2 dme-miR-980-3p 8mer-A1 GGCAGCTA X 6298611 6298618 + X_6298611_6298618_+ 0.444082702 0.499787223 0.471934962 0.03938903 CG3815 FBtr0070899 6298491 6298970 X + 6298545 6298695 3'utr CG3815 FlyBase G59160.1 AAGACACAGAAACATATACGCGCTCAACCGCAGCCAACTCCAGTGGAGCAGCACCAATCTCAGTGGGGCAGCTAGCAGCCAGGCATAGGGTTAGGGTTAGCAGATACCAGTTCAACTTCATCGCATCAATCATCGCAATGCAAAGCCTCGG 86 6298608 0.896491981 10 82 265 0.959183673 1.496006599 0.397959184 0.127906977 0.234693878 86 2 2 94 X:6298545-6298695 8 CG3815 FBtr0070899 6298491 6298970 GGCAGCTA 8mer-A1 dme-miR-980-3p X + 6298545 6298703 3'utr CG3815 FlyBase G44756.1 AAGACACAGAAACATATACGCGCTCAACCGCAGCCAACTCCAGTGGAGCAGCACCAATCTCAGTGGGGCAGCTAGCAGCCAGGCATAGGGTTAGGGTTAGCAGATACCAGTTCAACTTCATCGCATCAATCATCGCAATGCAAAGCCTCGGCAGTACTT 56 6298608 0.998818654 8 53 170 0.957894737 1.959041392 0.378947368 0.535714286 0.726315789 56 4 0 91 X:6298545-6298703 8 43 3716 FBgn0029861 300.3333333 11.21333333 17.14666667 0.143174251 3.834720571 2.50777605 3 3 3 0.2 dme-miR-252-5p 7mer-m8 GTACTTA X 6299191 6299197 - X_6299191_6299197_- 0.426149032 0.415696308 0.42092267 0.007391175 CG12219 FBtr0070925 6299052 6299296 X - 6299167 6299219 3'utr CG12219 FlyBase G65165.1 TTGCATATTAGCCATACCGAATGTACTTATCCGACGTTTCGTGTACTCCACAA 80 6299198 0.871310806 3 79 523 0.989473684 1.973127854 0.010526316 0.1625 0.294736842 80 1 0 94 X:6299167-6299219 7 CG12219 FBtr0070925 6299052 6299296 GTACTTA 7mer-m8 dme-miR-252-5p X - 6299101 6299219 3'utr CG12219 FlyBase G49094.1 TTGCATATTAGCCATACCGAATGTACTTATCCGACGTTTCGTGTACTCCACAAAGTCAAGGCGTCCCGCCGCCTGGCACCTATTGTGTATACTCTTCTCGTTCTCTATAATGCCTTAAC 64 6299198 0.978817854 8 64 431 1 1.968482949 0.032258065 0.359375 0.559139785 64 0 0 93 X:6299101-6299219 7 69 3717 FBgn0043796 206.3333333 12.49333333 19.20666667 0.334410339 5.522945571 3.592502603 1 1 1 0.2 dme-miR-308-3p 8mer-m1 CTGTGATT X 633704 633711 - X_633704_633711_- 0.383612968 0.383423068 0.383518018 0.00013428 Dredd FBtr0114561 633620 634524 X - 633651 633731 stop_codon Dredd FlyBase G63872.1 ACGTGTACTTTCCACCTCGTCTGTGATTTTGGTTTTTAACGTTAGCGCAGTTGTACGTCCACTCAAATTGCTCTATAAAGG 32 633704 0.991231728 6 28 296 0.9 1.556302501 0.075 0.21875 0.375 32 4 0 36 X:633651-633731 8 Dredd FBtr0114561 633620 634524 CTGTGATT 8mer-m1 dme-miR-308-3p X - 633657 633747 stop_codon Dredd FlyBase G48146.1 AGCACATTTCGCCAGCACGTGTACTTTCCACCTCGTCTGTGATTTTGGTTTTTAACGTTAGCGCAGTTGTACGTCCACTCAAATTGCTCTA 27 633704 0.991268941 10 25 269 0.906976744 1.591064607 0.023255814 0.407407407 0.627906977 27 4 0 39 X:633657-633747 8 23.5 3718 FBgn0020381 93.66666667 6.923333333 10.50666667 0.25088968 3.394318729 2.236675127 -7 -7 -7 0.2 dme-miR-1012-3p 7mer-m8 TTGACTA X 6360818 6360824 + X_6360818_6360824_+ 0.540737426 0.63152571 0.586131568 0.064197023 kdn FBtr0070906|FBtr0070907 6360362|6360362 6361323|6361323 X + 6360804 6360852 3'utr kdn FlyBase G59187.1 ATATATATATACGATTGACTATATATATAGGGACAGGCAGAGAGAGTAA 12 6360827 0.958975385 5 11 61 1 1.146128036 0.357142857 0.166666667 0.285714286 12 0 0 14 X:6360804-6360852 7 kdn FBtr0070906|FBtr0070907 6360362|6360362 6361323|6361323 TTGACTA 7mer-m8 dme-miR-1012-3p X + 6360802 6360865 3'utr kdn FlyBase G44782.1 ATATATATATATACGATTGACTATATATATAGGGACAGGCAGAGAGAGTAAAATGTTTGCGCCT 6 6360819 0.989375842 3 3 39 0.75 0.77815125 0.25 0.166666667 0.375 6 2 0 6 X:6360802-6360865 7 5.5 3719 FBgn0261955 413.3133333 20.16333333 31.04333333 0.013307096 0.272772359 0.177171695 -9 -1 -5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 6371106 6371111 - X_6371106_6371111_- 0.990021783 0.992069887 0.991045835 0.001448225 PpV FBtr0070921|FBtr0070921|FBtr0070921|FBtr0331430|FBtr0331430|FBtr0331430|FBtr0331431|FBtr0331431|FBtr0331431|FBtr0331432|FBtr0331432|FBtr0331432 6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063 6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728 X - 6371096 6371127 3'utr PpV FlyBase G65179.1 AAGAATAACCCAATTGTGTGATCCCGATCAAA 12 6371114 0.78320391 2 12 66 1 1.079181246 0.25 0 0 12 0 0 12 X:6371096-6371127 6 PpV FBtr0331431|FBtr0331431|FBtr0331431|FBtr0331432|FBtr0331432|FBtr0331432|FBtr0070921|FBtr0070921|FBtr0070921|FBtr0331430|FBtr0331430|FBtr0331430 6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063 6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 6371085 6371125 3'utr PpV FlyBase G49105.1 GAATAACCCAATTGTGTGATCCCGATCAAAACGATATGATT 10 6371113 0.967605388 3 10 54 1 1.041392685 0.181818182 0.1 0.181818182 10 0 0 11 X:6371085-6371125 6 11 3720 FBgn0003139 501.9866667 38.39333333 58.97333333 0.021912933 0.286508074 0.186524983 3 2 2.5 0.2 dme-miR-79-3p 8mer-A1 TAGCTTTA X 649248 649255 - X_649248_649255_- 0.603280433 0.605333604 0.604307019 0.001451832 Hmt4-20 FBtr0070151|FBtr0308652 648481|648889 650049|650049 X - 649224 649267 5'utr Hmt4-20 FlyBase G63878.1 CGAAACCCAACTTAGCTTTACACCAAGCAAGCCCCTCTGTTTGT 14 649256 0.954141693 2 12 55 0.888888889 1.204119983 0.166666667 0.214285714 0.388888889 14 2 0 16 X:649224-649267 8 Hmt4-20 FBtr0308652|FBtr0070151 648889|648481 650049|650049 TAGCTTTA 8mer-A1 dme-miR-79-3p X - 649206 649281 5'utr Hmt4-20 FlyBase G48150.1 AGACGCCTTGCATCCGAAACCCAACTTAGCTTTACACCAAGCAAGCCCCTCTGTTTGTTGCAAGATAATGAAACAA 8 649256 0.981180479 3 6 44 0.818181818 0.653212514 0.181818182 0.375 0.545454545 8 1 1 9 X:649206-649281 8 8.5 3721 FBgn0025639 495.87 9.743333333 14.96 0.01714159 0.872391379 0.568181818 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 649666 649671 - X_649666_649671_- 0.976934197 0.986281708 0.981607952 0.006609681 Hmt4-20 FBtr0070151|FBtr0070151|FBtr0070151|FBtr0308652|FBtr0308652|FBtr0308652 648481|648481|648481|648889|648889|648889 650049|650049|650049|650049|650049|650049 X - 649646 649688 5'utr Hmt4-20 FlyBase G63879.1 ATTTCTCTCTTTCTCTTTGTGATCACTTCCCGTTTCTCCCAAC 29 649672 0.728207661 4 25 348 0.909090909 1.176091259 0 0.137931034 0.242424242 29 2 1 30 X:649646-649688 6 Hmt4-20 FBtr0308652|FBtr0308652|FBtr0308652|FBtr0070151|FBtr0070151|FBtr0070151 648889|648889|648889|648481|648481|648481 650049|650049|650049|650049|650049|650049 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 649647 649683 5'utr Hmt4-20 FlyBase G48151.1 TCTCTTTCTCTTTGTGATCACTTCCCGTTTCTCCCAA 8 649672 0.671721366 4 6 95 0.8 0.903089987 0 0.125 0.3 8 2 0 8 X:649647-649683 6 17 3722 FBgn0025639 495.87 9.743333333 14.96 0.034283179 1.744782757 1.136363636 1 1 1 0.2 dme-bantam-3p 7mer-m8 TGATCTC X 650035 650041 - X_650035_650041_- 0.51232854 0.522178939 0.517253739 0.006965285 Hmt4-20 FBtr0070151|FBtr0308652 648481|648889 650049|650049 X - 649885 650065 stop_codon Hmt4-20 FlyBase G63880.2 TCACGGCCAGAAATAACCAACGACTGATCTCCAAGCAAATTGACTAAGCACAGTTGCCATTTCCATGAGAAGAGGAGGAGCGCGTAGGGGGAGAGTACCGGGCGAGGACATGGTGAAGCACCAGGTGCAGAGAAGCAGGAATAACAAGGGATGGAGACTGAGAATGGCTGCGCTGCTGGCG 112 650041 0.931338677 12 102 317 0.947368421 1.799340549 0.07518797 0.151785714 0.285714286 112 6 1 126 X:649885-650065 7 Hmt4-20 FBtr0308652|FBtr0070151 648889|648481 650049|650049 TGATCTC 7mer-m8 dme-bantam-3p X - 649971 650063 stop_codon Hmt4-20 FlyBase G48153.1 ACGGCCAGAAATAACCAACGACTGATCTCCAAGCAAATTGACTAAGCACAGTTGCCATTTCCATGAGAAGAGGAGGAGCGCGTAGGGGGAGAG 78 650041 0.847298196 9 70 228 0.860869565 1.694605199 0.060869565 0.333333333 0.547826087 78 15 1 99 X:649971-650063 7 74 3723 FBgn0025639 495.87 9.743333333 14.96 0.149232662 7.594936709 4.946524064 0 0 0 0.2 dme-miR-2a-2-5p 6mer2-7 GATGAG X 6530957 6530962 - X_6530957_6530962_- 0.890648162 0.999968021 0.945308091 0.077300772 RpL7A FBtr0343329 6530895 6531125 X - 6530933 6530985 3'utr RpL7A FlyBase G65191.1 AAGTGCCTGTGAGAGTGCTTTTGGATGAGTCGATGATTTGGCGTCGGCTTGGA 8 6530966 0.987310221 5 7 56 0.888888889 0.903089987 0.222222222 0.125 0.222222222 8 1 0 8 X:6530933-6530985 6 RpL7A FBtr0343329 6530895 6531125 GATGAG 6mer2-7 dme-miR-2a-2-5p X - 6530924 6530985 3'utr RpL7A FlyBase G49115.1 AAGTGCCTGTGAGAGTGCTTTTGGATGAGTCGATGATTTGGCGTCGGCTTGGATTCAATAAA 11 6530965 0.657050249 8 11 83 1 1.176091259 0.2 0.363636364 0.533333333 11 0 0 15 X:6530924-6530985 6 7.5 3724 FBgn0014026 13933.55333 1778.546667 2702.97 0.000538269 0.004216926 0.002774726 4 3 3.5 0.2 dme-miR-7-5p 7mer-A1 TCTTCCA X 6537461 6537467 + X_6537461_6537467_+ 0.822386882 0.823261985 0.822824434 0.000618789 dx FBtr0070914 6537377 6538575 X + 6537437 6537546 3'utr dx FlyBase G59218.1 CCACCGAAGTCCCCTCGATCATTCTCTTCCATTCGTCGTTAAGTTACTTTCTACATAATCTCAGTGTGTGTGCAATCCTCGTTTACTATGATATATTTTTTTTATAGATA 147 6537458 0.79244303 21 133 1425 0.901734104 1.716003344 0.248554913 0.136054422 0.265895954 147 15 2 156 X:6537437-6537546 7 dx FBtr0070914 6537377 6538575 TCTTCCA 7mer-A1 dme-miR-7-5p X + 6537441 6537534 3'utr dx FlyBase G44802.1 CGAAGTCCCCTCGATCATTCTCTTCCATTCGTCGTTAAGTTACTTTCTACATAATCTCAGTGTGTGTGCAATCCTCGTTTACTATGATATATTT 52 6537458 0.765246965 11 44 499 0.864864865 1.204119983 0.135135135 0.307692308 0.513513514 52 7 3 64 X:6537441-6537534 7 43.5 3725 FBgn0000524 299.9366667 9.43 14.42 0.145030618 4.612937434 3.016643551 3 3 3 0.2 dme-miR-79-3p 6mer3-8 TAGCTT X 6537608 6537613 + X_6537608_6537613_+ 0.676340447 0.864068376 0.770204411 0.132743742 dx FBtr0070914 6537377 6538575 X + 6537583 6537635 3'utr dx FlyBase G59219.1 CAACAGCAAACCACAATTGCAATTGTAGCTTCCTTTCCGCTCTTCCAATTCGT 22 6537601 0.983738085 9 22 171 1 1.447158031 0 0.272727273 0.428571429 22 0 0 28 X:6537583-6537635 6 dx FBtr0070914 6537377 6538575 TAGCTT 6mer3-8 dme-miR-79-3p X + 6537588 6537641 3'utr dx FlyBase G44804.1 GCAAACCACAATTGCAATTGTAGCTTCCTTTCCGCTCTTCCAATTCGTATTTGT 12 6537616 0.942894823 9 11 97 0.95 1.278753601 0 0.583333333 0.75 12 1 0 19 X:6537588-6537641 6 14.5 3726 FBgn0000524 299.9366667 9.43 14.42 0.048343539 1.537645811 1.00554785 7 -8 -0.5 0.2 dme-miR-308-3p 7mer-m1 TGTGATT X 6538076 6538082 + X_6538076_6538082_+ 0.438353903 0.443117366 0.440735634 0.003368303 dx FBtr0070914 6537377 6538575 X + 6537954 6538098 3'utr dx FlyBase G59222.1 CTTTATATCGGATTTATATAGGATTAAAATAGTATTTTGAGAGAGGAAATGGAGATGGGTAAATTCGATAGACTTGTCTCACTTGTCTTGGCCATTTAATCTCTTTCATTCAGCGAATTTGATGTGATTTTAATTTGAATTATTC 231 6538072 0.988029273 25 226 2057 0.985663082 2.138302698 0.064516129 0.16017316 0.304659498 231 3 1 275 X:6537954-6538098 7 dx FBtr0070914 6537377 6538575 TGTGATT 7mer-m1 dme-miR-308-3p X + 6538001 6538149 3'utr dx FlyBase G44807.2 AATGGAGATGGGTAAATTCGATAGACTTGTCTCACTTGTCTTGGCCATTTAATCTCTTTCATTCAGCGAATTTGATGTGATTTTAATTTGAATTATTCATTATTAAACGGAGCATTTAGGAAGCATAGTTGTAACGCAGCCAGATATTC 145 6538072 0.989176125 20 138 1336 0.958715596 2.320146286 0.02293578 0.344827586 0.564220183 145 9 0 209 X:6538001-6538149 7 96 3727 FBgn0000524 299.9366667 9.43 14.42 0.32006757 10.18027572 6.65742025 4 4 4 0.2 dme-bantam-3p 6mer3-8 TGATCT X 657757 657762 + X_657757_657762_+ 0.944624964 0.9530849 0.948854932 0.005982053 SkpA FBtr0345314|FBtr0070128|FBtr0100530|FBtr0070123|FBtr0070126|FBtr0070124|FBtr0070129|FBtr0070125|FBtr0070127 657597|657597|657597|657597|657597|657597|657597|657597|657597 657899|657899|657899|657899|657899|657899|657899|657899|657899 X + 657709 657782 3'utr SkpA FlyBase G57834.1 TTTTTTATTTTTAACCCCAGCAGAGACTCGATTTAAATTGTGTATAAATGATCTGTTGCTGATTTGATTCGCGG 24 657746 0.881938661 8 23 225 0.923076923 0.903089987 0.307692308 0.083333333 0.153846154 24 0 2 24 X:657709-657782 6 SkpA FBtr0070126|FBtr0070129|FBtr0070124|FBtr0070125|FBtr0070127|FBtr0345314|FBtr0070128|FBtr0100530|FBtr0070123 657597|657597|657597|657597|657597|657597|657597|657597|657597 657899|657899|657899|657899|657899|657899|657899|657899|657899 TGATCT 6mer3-8 dme-bantam-3p X + 657719 657785 3'utr SkpA FlyBase G43752.1 TTAACCCCAGCAGAGACTCGATTTAAATTGTGTATAAATGATCTGTTGCTGATTTGATTCGCGGGGT 21 657746 0.986149737 8 20 170 0.967741935 1.477121255 0.225806452 0.285714286 0.516129032 21 1 0 30 X:657719-657785 6 17 3728 FBgn0025637 1511.546667 228.32 348.46 0.011246758 0.074456903 0.048786087 11 11 11 0.2 dme-miR-92b-3p 6mer3-8 GTGCAA X 6596532 6596537 + X_6596532_6596537_+ 0.962832142 0.915459641 0.939145891 0.033497416 Pat1 FBtr0331600|FBtr0070945|FBtr0331599 6595666|6595666|6595666 6596954|6596954|6596630 X + 6596512 6596555 3'utr Pat1 FlyBase G59246.1 AAGATTTAAAGTTGTATAGAGTGCAAGAAGTATGCCCATTGTAT 5 6596528 0.973416598 2 5 32 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 X:6596512-6596555 6 Pat1 FBtr0331600|FBtr0070945|FBtr0331599 6595666|6595666|6595666 6596954|6596954|6596630 GTGCAA 6mer3-8 dme-miR-92b-3p X + 6596512 6596565 3'utr Pat1 FlyBase G44827.1 AAGATTTAAAGTTGTATAGAGTGCAAGAAGTATGCCCATTGTATAGTCTAAGTC 9 6596544 0.981941051 4 7 54 0.916666667 1.041392685 0.25 0.333333333 0.5 9 1 0 11 X:6596512-6596565 6 5 3729 FBgn0029878 899.4033333 29.25 44.72333333 0.005559241 0.170940171 0.111798465 4 -12 -4 0.2 dme-miR-932-5p 7mer-m8 GGAATTG X 6650575 6650581 + X_6650575_6650581_+ 0.699369609 0.700813147 0.700091378 0.001020709 pigs FBtr0308653|FBtr0343375|FBtr0070948 6650412|6650412|6650412 6653015|6653015|6652098 X + 6650536 6650611 3'utr pigs FlyBase G59272.1 GTGGGTAGTGAATAGTTAAGATAGGATTAGAGCCAAGCTGGAATTGTCTGCTGCTGCTACGGCGTGTGTGTGTGCG 128 6650574 0.936510671 16 99 899 0.787671233 1.583576586 0.226027397 0.1328125 0.239726027 128 29 2 115 X:6650536-6650611 7 pigs FBtr0308653|FBtr0343375|FBtr0070948 6650412|6650412|6650412 6653015|6653015|6652098 GGAATTG 7mer-m8 dme-miR-932-5p X + 6650534 6650600 3'utr pigs FlyBase G44847.1 TTGTGGGTAGTGAATAGTTAAGATAGGATTAGAGCCAAGCTGGAATTGTCTGCTGCTGCTACGGCGT 87 6650574 0.937648929 15 67 573 0.774193548 1.681241237 0.25 0.287356322 0.5 87 27 1 96 X:6650534-6650600 7 58 3730 FBgn0029881 6856.753333 130.81 200.9766667 0.008458814 0.443391178 0.288590715 1 1 1 0.2 dme-miR-8-3p 6mer3-8 CAGTAT X 6651675 6651680 + X_6651675_6651680_+ 0.923728865 0.927351395 0.92554013 0.002561494 pigs FBtr0308653|FBtr0343375|FBtr0070948 6650412|6650412|6650412 6653015|6653015|6652098 X + 6651485 6651697 3'utr pigs FlyBase G59274.1 TACGATCGCAAACACATAGAGGACGCATACCTAGTTTTCTAGAAATTTTTAAAGTAAAGCCAACAAAATTCTTCAGATTCGATTTGTAGCGATGCAGAGAATACGTTTATTTTTGTACGCTTGAACAGAGGAACCGGCGGAGATCGTGGGATCTGGAAAGATGAATAGCTTTTAGACAACTCGACTTTTACAGTATAGCTCTATATATATATG 77 6651672 0.983949203 19 74 571 0.97 1.685741739 0.09 0.220779221 0.4 77 2 1 97 X:6651485-6651697 6 pigs FBtr0308653|FBtr0343375|FBtr0070948 6650412|6650412|6650412 6653015|6653015|6652098 CAGTAT 6mer3-8 dme-miR-8-3p X + 6651598 6651701 3'utr pigs FlyBase G44848.1 TGTACGCTTGAACAGAGGAACCGGCGGAGATCGTGGGATCTGGAAAGATGAATAGCTTTTAGACAACTCGACTTTTACAGTATAGCTCTATATATATATGTATA 43 6651672 0.980874827 12 42 303 0.933333333 1.748188027 0.183333333 0.279069767 0.483333333 43 4 0 56 X:6651598-6651701 6 38.5 3731 FBgn0029881 6856.753333 130.81 200.9766667 0.005614902 0.294320006 0.191564527 3 3 3 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 6652316 6652321 + X_6652316_6652321_+ 0.547160987 0.690727853 0.61894442 0.101517129 pigs FBtr0308653|FBtr0343375 6650412|6650412 6653015|6653015 X + 6652220 6652500 3'utr pigs FlyBase G59280.1 TAACTACAACTATTAAACATTTATTGTATGATTTCATTCTTTTTTTTTTTTTTGTTTCTTTAGATTTAGCAATGTTAACATATAGTTTAGTACATCGTACCTATGCATATAAATTACATACATCATATATAGATTGTAAATTGTGTTTGTCCAATTGCCCACATGTTGTATAGTTCTTATGTACTCGTAAAATCGGCCTTAATGTTCAGTCTGTCGATATCTTGTATCAGTTTCATTTTGTATTCTTTTCTTATCATTATAATTTGTATTTTGAATTTAAG 233 6652323 0.988872396 39 222 2101 0.949090909 1.939519253 0.04 0.154506438 0.283636364 233 12 2 261 X:6652220-6652500 6 pigs FBtr0308653|FBtr0343375 6650412|6650412 6653015|6653015 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X + 6652290 6652440 3'utr pigs FlyBase G44853.1 AATGTTAACATATAGTTTAGTACATCGTACCTATGCATATAAATTACATACATCATATATAGATTGTAAATTGTGTTTGTCCAATTGCCCACATGTTGTATAGTTCTTATGTACTCGTAAAATCGGCCTTAATGTTCAGTCTGTCGATATC 159 6652323 0.850347378 26 147 1313 0.946721311 2.36361198 0.032786885 0.402515723 0.610655738 159 13 0 231 X:6652290-6652440 6 154 3732 FBgn0029881 6856.753333 130.81 200.9766667 0.022459609 1.177280024 0.766258106 -7 -7 -7 0.2 dme-miR-2a-2-5p 7mer-m8 TGATGAG X 6652804 6652810 + X_6652804_6652810_+ 0.656225214 0.658944443 0.657584829 0.001922765 pigs FBtr0308653|FBtr0343375 6650412|6650412 6653015|6653015 X + 6652705 6652813 3'utr pigs FlyBase G59281.1 AGAAAATTAAGCAATTGCCCGATTTGCATGCCAAAAGGTTGATAAGAAATCGAGCAAAAAACAAGATGAAGTGCACCACGGGTTCTCGAGCGCTGGCCATGATGAGCAT 15 6652799 0.969187036 7 12 60 0.8125 1.113943352 0.3125 0.066666667 0.125 15 3 0 13 X:6652705-6652813 7 pigs FBtr0308653|FBtr0343375 6650412|6650412 6653015|6653015 TGATGAG 7mer-m8 dme-miR-2a-2-5p X + 6652767 6652812 3'utr pigs FlyBase G44855.1 AAGATGAAGTGCACCACGGGTTCTCGAGCGCTGGCCATGATGAGCA 7 6652806 0.760593471 5 6 23 0.941176471 1.204119983 0.176470588 0.714285714 0.882352941 7 1 0 16 X:6652767-6652812 7 5 3733 FBgn0029881 6856.753333 130.81 200.9766667 0.000729208 0.038223377 0.02487851 5 -2 1.5 0.2 dme-miR-318-3p 6mer3-8 CCCAGT X 6659215 6659220 + X_6659215_6659220_+ 0.999518237 0.877144204 0.938331221 0.086531485 l(1)G0148 FBtr0343377|FBtr0070950 6659154|6659154 6659709|6659709 X + 6659180 6659242 3'utr l(1)G0148 FlyBase G59291.1 ACATACACCACTTGTACATACATACATATACTATACCCAGTTCGCTGATCATGATTGTACATA 9 6659226 0.985920225 6 9 71 1 1 0.1 0.111111111 0.2 9 0 0 10 X:6659180-6659242 6 l(1)G0148 FBtr0070950|FBtr0343377 6659154|6659154 6659709|6659709 CCCAGT 6mer3-8 dme-miR-318-3p X + 6659182 6659237 3'utr l(1)G0148 FlyBase G44861.1 ATACACCACTTGTACATACATACATATACTATACCCAGTTCGCTGATCATGATTGT 7 6659234 0.984238198 5 7 55 1 1 0.7 0.285714286 0.5 7 0 0 10 X:6659182-6659237 6 6.5 3734 FBgn0028360 627.0766667 25.24 38.74333333 0.010365559 0.257527734 0.167770799 -11 -19 -15 0.2 dme-miR-33-5p 6mer3-8 CAATGC X 6659304 6659309 + X_6659304_6659309_+ 0.988066645 0.590220384 0.789143514 0.281319746 l(1)G0148 FBtr0343377|FBtr0070950 6659154|6659154 6659709|6659709 X + 6659262 6659348 3'utr l(1)G0148 FlyBase G59292.1 AGCATATCTCATTATTGCACCCAGAGCCAGAAGAAACTCGTCCAATGCCCCACTAGGCCACATTTACTTACCTCAAGCCGCAGGCAG 26 6659307 0.949235065 6 23 102 0.875 1.447158031 0.09375 0.192307692 0.34375 26 4 0 28 X:6659262-6659348 6 l(1)G0148 FBtr0070950|FBtr0343377 6659154|6659154 6659709|6659709 CAATGC 6mer3-8 dme-miR-33-5p X + 6659259 6659347 3'utr l(1)G0148 FlyBase G44862.1 AAGAGCATATCTCATTATTGCACCCAGAGCCAGAAGAAACTCGTCCAATGCCCCACTAGGCCACATTTACTTACCTCAAGCCGCAGGCA 12 6659307 0.954349558 5 11 52 0.944444444 1.230448921 0.111111111 0.333333333 0.555555556 12 1 0 17 X:6659259-6659347 6 14 3735 FBgn0028360 627.0766667 25.24 38.74333333 0.022325819 0.554675119 0.361352491 -3 -3 -3 0.2 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA X 6667159 6667166 + X_6667159_6667166_+ 0.565993041 0.558204518 0.562098779 0.005507301 Ctr1A FBtr0070951|FBtr0308593|FBtr0308592|FBtr0308594 6667050|6667050|6667050|6667050 6668258|6667628|6667628|6667628 X + 6667112 6667188 3'utr Ctr1A FlyBase G59297.1 GAGGCGTTGGAGGAGCAAATGTCCATCTGAATGAAAGGCAGAGGCATTGGTGCTAAGCTGGGAATCCCAGGAAGCTC 252 6667158 0.949332518 4 249 1079 0.992831541 2.141449773 0.35483871 0.083333333 0.172043011 252 1 1 277 X:6667112-6667188 8 Ctr1A FBtr0308594|FBtr0308592|FBtr0308593|FBtr0070951 6667050|6667050|6667050|6667050 6667628|6667628|6667628|6668258 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" X + 6667138 6667189 3'utr Ctr1A FlyBase G44866.1 CTGAATGAAAGGCAGAGGCATTGGTGCTAAGCTGGGAATCCCAGGAAGCTCT 133 6667158 0.884878544 3 131 561 0.985148515 1.997823081 0.292079208 0.37593985 0.589108911 133 2 1 199 X:6667138-6667189 8 190 3736 FBgn0062413 431.6666667 29.72666667 45.48333333 0.44015444 6.391567616 4.177354342 1 1 1 0.2 dme-miR-11-3p 7mer-m1 TGTGATG X 6669798 6669804 - X_6669798_6669804_- 0.610636009 0.608911916 0.609773962 0.001219123 CG3198 FBtr0070991 6668537 6671982 X - 6669789 6669918 3'utr CG3198 FlyBase G65217.2 ATGTATGTTCATGTTCCCCCCTCCTCTTCACCAACAGGTAAATTGCGACTGAACCCGACCCCATAAAAATTATGATACTGATATTTGATATCGATCTCGATTAAATCGAATTTTTGTGATGTGACGAGAT 54 6669805 0.971146207 19 49 371 0.933333333 1.146128036 0.15 0.111111111 0.2 54 1 3 56 X:6669789-6669918 7 CG3198 FBtr0070991 6668537 6671982 TGTGATG 7mer-m1 dme-miR-11-3p X - 6669789 6669914 3'utr CG3198 FlyBase G49132.1 ATGTTCATGTTCCCCCCTCCTCTTCACCAACAGGTAAATTGCGACTGAACCCGACCCCATAAAAATTATGATACTGATATTTGATATCGATCTCGATTAAATCGAATTTTTGTGATGTGACGAGAT 33 6669806 0.80084011 14 32 231 0.941176471 1.079181246 0.176470588 0.393939394 0.607843137 33 0 3 48 X:6669789-6669914 7 19.5 3737 FBgn0029887 782.61 18.86666667 28.88333333 0.024916625 1.033568905 0.675129833 1 2 1.5 0.2 dme-miR-980-3p 7mer-A1 GCAGCTA X 6689439 6689445 - X_6689439_6689445_- 0.721676614 0.728640462 0.725158538 0.004924221 CG14442 FBtr0070988|FBtr0339493|FBtr0300772|FBtr0339491 6689294|6689318|6689318|6689318 6689803|6689803|6689803|6689803 X - 6689341 6689497 3'utr CG14442 FlyBase G65234.1 AAATGAAATGAAACACTGTGACGCCCCGAAAGCCACTGAAAATCGAAGAAATGCAGCTAAAATAAAAAGATAACTACGATCGATGGTGGAGATCCAACTAAACCTAATCCAGAATATGTAGCGCGTAAACAGAGCACTAAGTAGTTGTATGTATTAA 95 6689446 0.956170855 14 93 311 0.983193277 1.591064607 0.201680672 0.189473684 0.352941176 95 0 2 117 X:6689341-6689497 7 CG14442 FBtr0339491|FBtr0300772|FBtr0339493|FBtr0070988 6689318|6689318|6689318|6689294 6689803|6689803|6689803|6689803 GCAGCTA 7mer-A1 dme-miR-980-3p X - 6689390 6689484 3'utr CG14442 FlyBase G49142.1 CACTGTGACGCCCCGAAAGCCACTGAAAATCGAAGAAATGCAGCTAAAATAAAAAGATAACTACGATCGATGGTGGAGATCCAACTAAACCTAAT 62 6689446 0.957393786 8 62 187 1 1.886490725 0.168831169 0.209677419 0.363636364 62 0 0 77 X:6689390-6689484 7 50 3738 FBgn0029893 971.2033333 28.72 44.23333333 0.051482525 1.740947075 1.130369254 1 1 1 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 6696116 6696122 - X_6696116_6696122_- 0.518980657 0.535974935 0.527477796 0.012016714 CG14440 FBtr0070987 6695864 6697328 X - 6696088 6696143 3'utr CG14440 FlyBase G65246.1 AATAAAGTGTAACCATTAAGTTCTAGTCGAAATTTCAAATTGTTTTTCTCCTGTCT 34 6696123 0.981979081 3 34 259 1 1.568201724 0.135135135 0.088235294 0.162162162 34 0 0 37 X:6696088-6696143 7 CG14440 FBtr0070987 6695864 6697328 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X - 6696108 6696143 3'utr CG14440 FlyBase G49150.1 AATAAAGTGTAACCATTAAGTTCTAGTCGAAATTTC 14 6696123 0.719570925 2 13 101 0.727272727 1.204119983 0 0.285714286 0.545454545 14 6 0 16 X:6696108-6696143 7 23.5 3739 FBgn0029894 265.63 13.82333333 21.15 0.088468923 1.700024114 1.111111111 1 1 1 0.2 dme-miR-980-3p 6mer3-8 GGCAGC X 6697074 6697079 - X_6697074_6697079_- 0.969240489 0.974936515 0.972088502 0.00402768 CG14440 FBtr0070987|FBtr0310419 6695864|6696764 6697328|6697328 X - 6697041 6697099 3'utr CG14440 FlyBase G65249.1 TGAGGACTTGCAAATGAATGGGCAGCAGGCACTCTAGGATTAAAGCCAGGCAATTTTTT 24 6697081 0.959687632 6 21 102 0.866666667 1.113943352 0.233333333 0.25 0.4 24 3 1 26 X:6697041-6697099 6 CG14440 FBtr0310419|FBtr0070987 6696764|6695864 6697328|6697328 GGCAGC 6mer3-8 dme-miR-980-3p X - 6697054 6697099 3'utr CG14440 FlyBase G49152.1 TGAGGACTTGCAAATGAATGGGCAGCAGGCACTCTAGGATTAAAGC 10 6697082 0.868282228 2 10 36 1 1.113943352 0.307692308 0.2 0.384615385 10 0 0 13 X:6697054-6697099 6 15 3740 FBgn0029894 265.63 13.82333333 21.15 0.056469525 1.085121775 0.709219858 2 3 2.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC X 6721473 6721478 - X_6721473_6721478_- 0.981594207 0.99171742 0.986655814 0.007158183 CG3168 FBtr0340265|FBtr0070984|FBtr0340267|FBtr0340266|FBtr0070986|FBtr0070985|FBtr0340268 6720473|6720473|6720473|6720473|6720473|6720473|6720002 6721551|6721551|6721551|6721551|6721551|6721551|6721551 X - 6721452 6721502 3'utr CG3168 FlyBase G65255.1 CCATAGAATCTTCTGCTTTAACTGCTAGTCTGCAAGGTCTTGTTTCGAGTC 11 6721488 0.742662216 5 9 95 0.8125 1.113943352 0.125 0.454545455 0.625 11 3 0 13 X:6721452-6721502 6 CG3168 FBtr0070985|FBtr0340268|FBtr0340266|FBtr0070986|FBtr0340267|FBtr0340265|FBtr0070984 6720473|6720002|6720473|6720473|6720473|6720473|6720473 6721551|6721551|6721551|6721551|6721551|6721551|6721551 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" X - 6721441 6721488 3'utr CG3168 FlyBase G49156.1 GCTTTAACTGCTAGTCTGCAAGGTCTTGTTTCGAGTCATGATACTATG 6 6721472 0.985759735 3 4 41 1 0.954242509 0.666666667 0.5 0.666666667 6 0 0 9 X:6721441-6721488 6 6 3741 FBgn0029896 793.0366667 27.79 42.01333333 0.007565854 0.215905002 0.142811806 10 -6 2 0.2 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA X 6781079 6781086 - X_6781079_6781086_- 0.475094393 0.535669822 0.505382107 0.042833276 C3G FBtr0340087|FBtr0299791 6780788|6780788 6782353|6782353 X - 6781048 6781108 3'utr C3G FlyBase G65273.1 AACAGAAAAAAAGGCTGCTTACTTGAAGAATTTAATTCCCGATCACCATAGCCATTTTAAT 11 6781090 0.953142618 4 11 55 1 1.176091259 0.066666667 0.363636364 0.533333333 11 0 0 15 X:6781048-6781108 8 C3G FBtr0299791|FBtr0340087 6780788|6780788 6782353|6782353 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p X - 6781064 6781107 3'utr C3G FlyBase G49169.1 ACAGAAAAAAAGGCTGCTTACTTGAAGAATTTAATTCCCGATCA 9 6781089 0.943563448 3 9 38 1 1.176091259 0 0.333333333 0.6 9 0 0 15 X:6781064-6781107 8 9 3742 FBgn0259228 1638.55 32.65333333 50.12 0.005492661 0.275622703 0.179569034 4 3 3.5 0.2 dme-miR-304-5p 6mer3-8 TGAGAT X 6781828 6781833 - X_6781828_6781833_- 0.547891807 0.552509652 0.550200729 0.003265348 C3G FBtr0300526|FBtr0334967|FBtr0299794|FBtr0299793|FBtr0334968|FBtr0340087|FBtr0299791|FBtr0299795|FBtr0299792|FBtr0334969 6781414|6781414|6781414|6781414|6781414|6780788|6780788|6781414|6781414|6781414 6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353 X - 6781806 6781858 3'utr C3G FlyBase G65276.1 AAATCAGCAATTTTCGCTTTTGTTTTGAGATCTCTTTTTTACACAAGAACACA 26 6781824 0.979570102 9 24 340 0.931034483 1.431363764 0.413793103 0.115384615 0.206896552 26 2 0 27 X:6781806-6781858 6 C3G FBtr0299792|FBtr0334969|FBtr0299791|FBtr0299795|FBtr0334968|FBtr0340087|FBtr0300526|FBtr0334967|FBtr0299794|FBtr0299793 6781414|6781414|6780788|6781414|6781414|6780788|6781414|6781414|6781414|6781414 6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353 TGAGAT 6mer3-8 dme-miR-304-5p X - 6781815 6781847 3'utr C3G FlyBase G49172.1 TTTCGCTTTTGTTTTGAGATCTCTTTTTTACAC 22 6781823 0.624662568 9 21 307 0.972222222 1.544068044 0.583333333 0.409090909 0.638888889 22 1 0 35 X:6781815-6781847 6 22 3743 FBgn0259228 1638.55 32.65333333 50.12 0.013426505 0.673744385 0.438946528 -9 -10 -9.5 0.2 dme-miR-190-5p 6mer3-8 ACATAT X 6812161 6812166 + X_6812161_6812166_+ 0.999999994 0.999996269 0.999998132 2.62E-06 pod1 FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228|FBtr0112956|FBtr0070964|FBtr0070966 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813830|6813830|6813830|6813830|6813520|6813830|6813830 X + 6812103 6812165 3'utr pod1 FlyBase G59407.1 TCAGTTTATGTGGCCATATAGGAAAAGTGAGGAGAAGGACTTAGATGATACTGCTTTTACATA 8 6812159 0.93192631 7 7 60 0.888888889 0.903089987 0 0.125 0.222222222 8 1 0 8 X:6812103-6812165 5 pod1 FBtr0112956|FBtr0070964|FBtr0070966|FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813520|6813830|6813830|6813830|6813830|6813830|6813830 ACATAT 6mer3-8 dme-miR-190-5p X + 6812107 6812191 3'utr pod1 FlyBase G44936.1 TTTATGTGGCCATATAGGAAAAGTGAGGAGAAGGACTTAGATGATACTGCTTTTACATATACGCAAAATGTATTTCCCTCTCTGT 8 6812144 0.984837052 8 8 65 1 1.041392685 0 0.375 0.545454545 8 0 0 11 X:6812107-6812191 6 2.5 3744 FBgn0029903 1544.65 31.03666667 47.70666667 0.00161849 0.080549887 0.052403577 2 17 9.5 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 6812373 6812379 + X_6812373_6812379_+ 0.661615258 0.661615107 0.661615183 1.41E-07 pod1 FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228|FBtr0112956|FBtr0070964|FBtr0070966 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813830|6813830|6813830|6813830|6813520|6813830|6813830 X + 6812358 6812404 3'utr pod1 FlyBase G59409.2 ACCCCCACCATTGTTTCTAGTCTTTCGCATCGTTCGATCCCCCAAAT 90 6812380 0.790910513 10 61 825 0.673267327 1.230448921 0.108910891 0.122222222 0.217821782 90 30 3 68 X:6812358-6812404 7 pod1 FBtr0112956|FBtr0070964|FBtr0070966|FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813520|6813830|6813830|6813830|6813830|6813830|6813830 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X + 6812359 6812403 3'utr pod1 FlyBase G44937.2 CCCCCACCATTGTTTCTAGTCTTTCGCATCGTTCGATCCCCCAAA 91 6812380 0.630473063 8 45 765 0.510948905 0.942008053 0.03649635 0.395604396 0.598540146 91 60 7 70 X:6812359-6812403 7 82.5 3745 FBgn0029903 1544.65 31.03666667 47.70666667 0.053410158 2.658146279 1.729318055 -7 -7 -7 0.2 dme-miR-14-3p 6mer2-7 AGACTG X 6812467 6812472 + X_6812467_6812472_+ 0.999817553 0.999938702 0.999878128 8.56E-05 pod1 FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228|FBtr0112956|FBtr0070964|FBtr0070966 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813830|6813830|6813830|6813830|6813520|6813830|6813830 X + 6812446 6812488 3'utr pod1 FlyBase G59410.1 AGACAGGAAACAAAAACATATAGACTGTAGCCAAACGAAAAAT 99 6812466 0.900310695 3 98 295 0.991869919 1.785329835 0.097560976 0.222222222 0.37398374 99 0 1 122 X:6812446-6812488 6 pod1 FBtr0112956|FBtr0070964|FBtr0070966|FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813520|6813830|6813830|6813830|6813830|6813830|6813830 AGACTG 6mer2-7 dme-miR-14-3p X + 6812450 6812488 3'utr pod1 FlyBase G44938.1 AGGAAACAAAAACATATAGACTGTAGCCAAACGAAAAAT 71 6812466 0.889506262 3 69 215 0.979166667 1.496006599 0.104166667 0.253521127 0.447916667 71 0 2 94 X:6812450-6812488 6 84.5 3746 FBgn0029903 1544.65 31.03666667 47.70666667 0.054704949 2.722586188 1.771240917 1 1 1 0.2 dme-bantam-3p 6mer2-7 GATCTC X 6813304 6813309 + X_6813304_6813309_+ 0.971863586 0.816690851 0.894277218 0.109723668 pod1 FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228|FBtr0112956|FBtr0070964|FBtr0070966 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813830|6813830|6813830|6813830|6813520|6813830|6813830 X + 6813190 6813325 3'utr pod1 FlyBase G59413.1 AAACGCCATGGAACGACTGACAGACAAGTATTCGCTAAACATTCTGATCCAAATCTGCCCGGCCCGTCAAAAAGTGTTCCACAGCACGAGTAGAATTGATCTGGGATCGATTGGGATCTCGGGATCGGGGTAGCGG 30 6813286 0.870300535 12 26 139 0.861111111 1.014240439 0.277777778 0.2 0.333333333 30 3 2 31 X:6813190-6813325 6 pod1 FBtr0112956|FBtr0070964|FBtr0070966|FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813520|6813830|6813830|6813830|6813830|6813830|6813830 GATCTC 6mer2-7 dme-bantam-3p X + 6813272 6813319 3'utr pod1 FlyBase G44942.1 AGCACGAGTAGAATTGATCTGGGATCGATTGGGATCTCGGGATCGGGG 7 6813300 0.977940622 4 6 43 0.8 0.903089987 0.7 0.428571429 0.6 7 2 0 8 X:6813272-6813319 6 6.5 3747 FBgn0029903 1544.65 31.03666667 47.70666667 0.004208073 0.209429707 0.136249301 18 4 11 0.2 dme-miR-970-3p 6mer3-8 TCTTAT X 6813451 6813456 + X_6813451_6813456_+ 0.925347897 0.950319185 0.937833541 0.017657376 pod1 FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228|FBtr0112956|FBtr0070964|FBtr0070966 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813830|6813830|6813830|6813830|6813520|6813830|6813830 X + 6813432 6813472 3'utr pod1 FlyBase G59414.1 ATTACGATTTTCGAACGTCTCTTATTTATATTTATATATAT 20 6813453 0.739894318 4 19 217 0.96 1.380211242 0 0.2 0.36 20 1 0 24 X:6813432-6813472 6 pod1 FBtr0112956|FBtr0070964|FBtr0070966|FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813520|6813830|6813830|6813830|6813830|6813830|6813830 TCTTAT 6mer3-8 dme-miR-970-3p X + 6813404 6813470 3'utr pod1 FlyBase G44943.1 GTCATTCTGTATTTATTAGCCATATTCGATTACGATTTTCGAACGTCTCTTATTTATATTTATATAT 18 6813453 0.990403806 6 18 189 1 1.447158031 0.035714286 0.444444444 0.642857143 18 0 0 28 X:6813404-6813470 6 16.5 3748 FBgn0029903 1544.65 31.03666667 47.70666667 0.010682032 0.531629256 0.345863611 -2 -2 -2 0.2 dme-miR-980-3p 6mer3-8 GGCAGC X 6818417 6818422 - X_6818417_6818422_- 0.59749845 0.716977373 0.657237912 0.08448434 Nf-YC FBtr0070974 6818176 6818700 X - 6818401 6818444 3'utr Nf-YC FlyBase G65292.1 ATTGCTGACCCTCCCGCCCCCTGGCAGCAGGTTTCACCTTCTCC 11 6818423 0.941393583 2 11 48 1 1.079181246 0.166666667 0.090909091 0.166666667 11 0 0 12 X:6818401-6818444 6 Nf-YC FBtr0070974 6818176 6818700 GGCAGC 6mer3-8 dme-miR-980-3p X - 6818408 6818473 3'utr Nf-YC FlyBase G49181.1 GTGTAGAAACGATTTCTCAATTGTAATTTATTGCTGACCCTCCCGCCCCCTGGCAGCAGGTTTCAC 9 6818423 0.99961713 4 8 46 0.928571429 1.113943352 0.071428571 0.333333333 0.571428571 9 1 0 13 X:6818408-6818473 6 7 3749 FBgn0029905 205.9466667 9.923333333 15.23333333 0.033989382 0.705408129 0.4595186 1 1 1 0.2 dme-miR-11-3p 7mer-m1 TGTGATG X 6839650 6839656 - X_6839650_6839656_- 0.526228131 0.532661677 0.529444904 0.004549242 CG14435 FBtr0071042|FBtr0343323 6839430|6838172 6840376|6840376 X - 6839636 6839683 3'utr CG14435 FlyBase G65305.1 ACCAACCAACAAAAGAATGTCAACCAATGTGATGTTAAATTTTATATT 58 6839649 0.986446574 7 53 460 0.929577465 1.51851394 0.112676056 0.206896552 0.352112676 58 4 1 66 X:6839636-6839683 7 CG14435 FBtr0343323|FBtr0071042 6838172|6839430 6840376|6840376 TGTGATG 7mer-m1 dme-miR-11-3p X - 6839635 6839682 3'utr CG14435 FlyBase G49188.2 CCAACCAACAAAAGAATGTCAACCAATGTGATGTTAAATTTTATATTT 45 6839649 0.987678926 9 39 361 0.880597015 1.469822016 0.23880597 0.355555556 0.567164179 45 7 1 59 X:6839635-6839682 7 48.5 3750 FBgn0029911 561.5333333 25.08 38.61666667 0.086370652 1.933811802 1.255934398 -7 -7 -7 0.2 dme-miR-282-5p 8mer-A1 AGAGGCTA X 6839994 6840001 - X_6839994_6840001_- 0.614067789 0.574146483 0.594107136 0.028228622 CG14435 FBtr0071042|FBtr0343323 6839430|6838172 6840376|6840376 X - 6839989 6840050 3'utr CG14435 FlyBase G65308.1 GACACTGCGACCAGTTGGAGCTTGGAAAGATTGGAGGATGGTACATGGGAGAGGCTATGCCA 8 6840019 0.831677519 6 7 34 1 0.903089987 0.25 0 0 8 0 0 8 X:6839989-6840050 8 CG14435 FBtr0343323|FBtr0071042 6838172|6839430 6840376|6840376 AGAGGCTA 8mer-A1 dme-miR-282-5p X - 6839986 6840051 3'utr CG14435 FlyBase G49191.1 GGACACTGCGACCAGTTGGAGCTTGGAAAGATTGGAGGATGGTACATGGGAGAGGCTATGCCACAA 6 6840005 0.946542835 3 5 25 1 0.954242509 0.444444444 0.5 0.666666667 6 0 0 9 X:6839986-6840051 8 3.5 3751 FBgn0029911 561.5333333 25.08 38.61666667 0.006232934 0.139553429 0.090634441 18 4 11 0.2 dme-miR-277-3p 8mer-A1 TGCATTTA X 6851746 6851753 + X_6851746_6851753_+ 0.624526086 0.604243723 0.614384905 0.014341823 CG4558 FBtr0070995|FBtr0300177 6851128|6851390 6851884|6851884 X + 6851685 6851839 3'utr CG4558 FlyBase G59445.1 CAGTTAACAGTTAGCTCCTGGCAGCCGCGCTTCATCCTTGTGTTCGTCGTTCTAACCATTTTGCATTTAAAACTCTCGACTCTACGTTCTGTTCACACCAACTAGCGTAGCCAACGGAAAGCGATTTTGTAAATATCCATTGCCAGACTTGAGTT 94 6851745 0.986301179 14 91 781 0.981481481 2.025305865 0.064814815 0.138297872 0.25 94 2 0 106 X:6851685-6851839 8 CG4558 FBtr0070995|FBtr0300177 6851128|6851390 6851884|6851884 TGCATTTA 8mer-A1 dme-miR-277-3p X + 6851688 6851814 3'utr CG4558 FlyBase G44966.1 TTAACAGTTAGCTCCTGGCAGCCGCGCTTCATCCTTGTGTTCGTCGTTCTAACCATTTTGCATTTAAAACTCTCGACTCTACGTTCTGTTCACACCAACTAGCGTAGCCAACGGAAAGCGATTTTGT 39 6851722 0.987748038 8 37 331 0.943396226 1.22184875 0.169811321 0.230769231 0.433962264 39 1 2 50 X:6851688-6851814 8 26 3752 FBgn0029914 220.6666667 13.97333333 21.30666667 0.117824773 1.860687023 1.220275344 1 24 12.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 6851938 6851943 - X_6851938_6851943_- 0.755245416 0.755339418 0.755292417 6.65E-05 CG14434 FBtr0345899|FBtr0345899|FBtr0345899|FBtr0343322|FBtr0343322|FBtr0343322|FBtr0071040|FBtr0071040|FBtr0071040 6851907|6851907|6851907|6851907|6851907|6851907|6851907|6851907|6851907 6852045|6852045|6852045|6852045|6852045|6852045|6852045|6852045|6852045 X - 6851926 6851955 3'utr CG14434 FlyBase G65314.1 CCATAAAACATTCTGTGAGGCAAACAAAAA 5 6851942 0.908657898 3 5 17 1 0.903089987 0 0.6 0.75 5 0 0 8 X:6851926-6851955 6 CG14434 FBtr0071040|FBtr0071040|FBtr0071040|FBtr0343322|FBtr0343322|FBtr0343322|FBtr0345899|FBtr0345899|FBtr0345899 6851907|6851907|6851907|6851907|6851907|6851907|6851907|6851907|6851907 6852045|6852045|6852045|6852045|6852045|6852045|6852045|6852045|6852045 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X - 6851927 6851962 3'utr CG14434 FlyBase G49195.1 TTGTTATCCATAAAACATTCTGTGAGGCAAACAAAA 10 6851942 0.95233215 3 8 41 0.875 1.146128036 0 0.4 0.625 10 2 0 14 X:6851927-6851962 6 7.5 3753 FBgn0029915 147.6666667 23.04333333 35.10666667 0.050790068 0.325473745 0.213634637 -1 -1 -1 0.2 dme-bantam-3p 6mer2-7 GATCTC X 6879019 6879024 + X_6879019_6879024_+ 0.999250442 0.99999836 0.999624401 0.000528916 CG43736 FBtr0345898|FBtr0330265|FBtr0330263|FBtr0330268|FBtr0330264 6878698|6878698|6878698|6878698|6878698 6881580|6880502|6880429|6881580|6880095 X + 6878965 6879061 3'utr CG43736 FlyBase G59476.1 CGCCACCGCCAGCTCCGGCAGTTCCAGCCACACCACCCGGAGCGGGAACCATTGGATCTCCTGCACTATCAGCAACACCTGTACACACCACCAGCAA 53 6879017 0.952118737 7 51 225 0.966666667 1.462397998 0.266666667 0.113207547 0.216666667 53 1 1 58 X:6878965-6879061 6 CG43736 FBtr0345898|FBtr0330265|FBtr0330268|FBtr0330263|FBtr0330264 6878698|6878698|6878698|6878698|6878698 6881580|6880502|6881580|6880429|6880095 GATCTC 6mer2-7 dme-bantam-3p X + 6878965 6879063 3'utr CG43736 FlyBase G44982.1 CGCCACCGCCAGCTCCGGCAGTTCCAGCCACACCACCCGGAGCGGGAACCATTGGATCTCCTGCACTATCAGCAACACCTGTACACACCACCAGCAACA 43 6879026 0.950015205 7 42 182 0.985294118 1.826074803 0.25 0.348837209 0.588235294 43 1 0 67 X:6878965-6879063 6 43.5 3754 FBgn0263993 1284.363333 32.20666667 49.73 0.033868921 1.350652039 0.874723507 2 -7 -2.5 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 6958287 6958292 - X_6958287_6958292_- 0.907951742 0.730709204 0.819330473 0.125329374 CG32732 FBtr0071039 6958030 6958448 X - 6958274 6958310 3'utr CG32732 FlyBase G65319.1 CAGGTTTTGAAGTTGGATACCAAAATAACTTATAATT 14 6958294 0.725897259 6 10 89 0.705882353 1.079181246 0.294117647 0.214285714 0.352941176 14 5 0 12 X:6958274-6958310 6 CG32732 FBtr0071039 6958030 6958448 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X - 6958279 6958308 3'utr CG32732 FlyBase G49198.1 GGTTTTGAAGTTGGATACCAAAATAACTTA 8 6958294 0.737993789 4 7 44 0.9 0.954242509 0.1 0.25 0.4 8 1 0 9 X:6958279-6958308 6 11 3755 FBgn0052732 209.6666667 11.63 17.8 0.052464229 0.945829751 0.617977528 2 2 2 0.2 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC X 7098625 7098630 - X_7098625_7098630_- 0.753928073 0.878905473 0.816416773 0.088372367 CG4615 FBtr0071020 7098576 7099373 X - 7098605 7098715 3'utr CG4615 FlyBase G65350.1 ATTTACAAATACGCTTGATATCTTGATATTTTCGGGGCCTGGCTCGCGATCGGCGGATATAGCTTTCGTGTACTACTCGTATTTATGGTGCAGATCGATTAGTTTTAATGG 38 7098647 0.911034282 11 32 327 0.860465116 1.267171728 0.139534884 0.105263158 0.209302326 38 5 1 37 X:7098605-7098715 6 CG4615 FBtr0071020 7098576 7099373 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" X - 7098616 7098738 3'utr CG4615 FlyBase G49212.1 CGCAGATACTGAAGAAGGTGACTATTTACAAATACGCTTGATATCTTGATATTTTCGGGGCCTGGCTCGCGATCGGCGGATATAGCTTTCGTGTACTACTCGTATTTATGGTGCAGATCGATT 30 7098647 0.886985773 12 26 228 0.866666667 1.591064607 0.288888889 0.333333333 0.555555556 30 6 0 39 X:7098616-7098738 6 8 3756 FBgn0029935 110.3333333 6.846666667 10.52 0.072507553 1.168451801 0.760456274 17 17 17 0.2 dme-miR-283-5p 8mer-A1 TGATATTA X 7099063 7099070 - X_7099063_7099070_- 0.572914865 0.589584129 0.581249497 0.011786904 CG4615 FBtr0071020 7098576 7099373 X - 7099048 7099082 3'utr CG4615 FlyBase G65352.1 TCAACTTTAACTTGATATTATTAGCGATATTCATA 12 7099071 0.808919566 2 11 125 1 1.146128036 0 0.166666667 0.285714286 12 0 0 14 X:7099048-7099082 8 CG4615 FBtr0071020 7098576 7099373 TGATATTA 8mer-A1 dme-miR-283-5p X - 7098972 7099092 3'utr CG4615 FlyBase G49213.1 CCTCTCCCTCTCAACTTTAACTTGATATTATTAGCGATATTCATATATTTAGTATCCATAACGACCCGTTTTGGCCATGTGTTTCTCAAAAGACTTTGAACCGTACTCAAAAGGCAAAGGA 38 7099071 0.985942427 9 35 343 0.933333333 1.447158031 0.316666667 0.394736842 0.616666667 38 3 1 56 X:7098972-7099092 8 13 3757 FBgn0029935 110.3333333 6.846666667 10.52 0.117824773 1.898734177 1.235741445 1 1 1 0.2 dme-miR-263a-5p 8mer-m1 GTGCCATT X 7106600 7106607 - X_7106600_7106607_- 0.32797389 0.343968948 0.335971419 0.011310173 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 X - 7106533 7106651 3'utr fz4 FlyBase G65363.1 AAACGCAATTGCAATCGTAGCCGTAATGCCTAATTGTATTCAGTGTGCCATTAGCTTTAGGGACTTAACTGAAACGAGTCAATATCATGAAATTACCTTAAAAGAGTCCTTTTCCAGCA 189 7106601 0.837215011 15 178 1536 0.946188341 2.02325246 0.098654709 0.142857143 0.273542601 189 11 1 211 X:7106533-7106651 8 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 GTGCCATT 8mer-m1 dme-miR-263a-5p X - 7106506 7106644 3'utr fz4 FlyBase G49223.1 ATTGCAATCGTAGCCGTAATGCCTAATTGTATTCAGTGTGCCATTAGCTTTAGGGACTTAACTGAAACGAGTCAATATCATGAAATTACCTTAAAAGAGTCCTTTTCCAGCAACGAACTTTGGCGGAATTACTGAGGGT 139 7106601 0.986372923 15 129 1095 0.917030568 1.84509804 0.15720524 0.431654676 0.655021834 139 17 2 210 X:7106506-7106644 8 124 3758 FBgn0027342 197.34 6.033333333 9.256666667 0.62835715 20.55248619 13.39575081 -6 -6 -6 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA X 7106666 7106673 - X_7106666_7106673_- 0.450791407 0.46223741 0.456514409 0.008093544 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 X - 7106655 7106702 3'utr fz4 FlyBase G65364.1 TGCTGTCTTCTCCCGATGCCGAAACAAGTGTACTTAACAATCGAAAAA 261 7106674 0.914030738 4 257 1204 0.99044586 2.191730393 0.207006369 0.16091954 0.302547771 261 2 1 311 X:7106655-7106702 8 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 GTACTTAA 8mer-A1 dme-miR-252-5p X - 7106654 7106702 3'utr fz4 FlyBase G49224.1 TGCTGTCTTCTCCCGATGCCGAAACAAGTGTACTTAACAATCGAAAAAA 165 7106674 0.9099972 5 162 763 0.988593156 2.414973348 0.19391635 0.43030303 0.642585551 165 3 0 260 X:7106654-7106702 8 208 3759 FBgn0027342 197.34 6.033333333 9.256666667 1.054018445 34.47513812 22.47029168 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA X 7106767 7106774 - X_7106767_7106774_- 0.650017497 0.650027502 0.6500225 7.07E-06 fz4 FBtr0071018|FBtr0071018|FBtr0071018|FBtr0071017|FBtr0071017|FBtr0071017 7106270|7106270|7106270|7106270|7106270|7106270 7107380|7107380|7107380|7107380|7107380|7107380 X - 7106737 7106793 3'utr fz4 FlyBase G65365.1 AACGCGCAGCAACCAAATACTGTGATACGCATGTTCATGTCTTCAAAAACAAAAAAA 70 7106776 0.954505714 6 66 265 0.939759036 1.892094603 0.301204819 0.171428571 0.301204819 70 5 0 78 X:7106737-7106793 8 fz4 FBtr0071018|FBtr0071018|FBtr0071018|FBtr0071017|FBtr0071017|FBtr0071017 7106270|7106270|7106270|7106270|7106270|7106270 7107380|7107380|7107380|7107380|7107380|7107380 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 7106755 7106798 3'utr fz4 FlyBase G49225.1 AGAGAAACGCGCAGCAACCAAATACTGTGATACGCATGTTCATG 33 7106776 0.929823187 3 28 104 0.847457627 1.22184875 0.271186441 0.484848485 0.711864407 33 7 2 50 X:7106755-7106798 8 50 3760 FBgn0027342 197.34 6.033333333 9.256666667 0.253369819 8.287292818 5.401512423 2 2 2 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA X 7106984 7106991 - X_7106984_7106991_- 0.453155862 0.46273429 0.457945076 0.006772952 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 X - 7106967 7107012 3'utr fz4 FlyBase G65366.2 TCATATCCTATTTTCCTGTGTGTACTTAATGTTGCTCCTAATTAGT 158 7106992 0.808230906 8 146 1920 0.924324324 2.23299611 0.021621622 0.139240506 0.264864865 158 14 0 171 X:7106967-7107012 8 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 GTACTTAA 8mer-A1 dme-miR-252-5p X - 7106971 7107017 3'utr fz4 FlyBase G49227.1 GGGCTTCATATCCTATTTTCCTGTGTGTACTTAATGTTGCTCCTAAT 123 7106992 0.799816306 7 119 1476 0.967914439 2.257678575 0.026737968 0.390243902 0.598930481 123 6 0 181 X:7106971-7107017 8 140 3761 FBgn0027342 197.34 6.033333333 9.256666667 0.709435492 23.20441989 15.12423479 1 1 1 0.2 dme-miR-276a-3p 6mer2-7 GTTCCT X 7107318 7107323 - X_7107318_7107323_- 0.557245762 0.935061423 0.746153592 0.267155973 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 X - 7107262 7107446 stop_codon fz4 FlyBase G65368.1 AAGTACAGCCAGCACGGCAGCTACTATCCCCACTTGCAGCAGTATGGCAATGAGACGCTACTCTAGACGGAATTGGATTAGGTACCATTTCAGGGCAGGAAATGCTTCCTGCTTCCAGTCAATGTTCCTGCAGCAGCTGCTGTGCCAAAGTCAATCCTCTACTATAACTTAATGCGGTTTCGGGT 61 7107324 0.977823112 19 56 369 0.927536232 1.806179974 0.101449275 0.114754098 0.217391304 61 5 0 64 X:7107262-7107446 6 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 GTTCCT 6mer2-7 dme-miR-276a-3p X - 7107297 7107378 3'utr fz4 FlyBase G49229.1 GGAATTGGATTAGGTACCATTTCAGGGCAGGAAATGCTTCCTGCTTCCAGTCAATGTTCCTGCAGCAGCTGCTGTGCCAAAG 32 7107324 0.981795499 8 28 203 0.924528302 1.69019608 0.169811321 0.34375 0.603773585 32 4 0 49 X:7107297-7107378 6 29.5 3762 FBgn0027342 197.34 6.033333333 9.256666667 0.149488193 4.889502762 3.18689233 1 1 1 0.2 dme-miR-33-5p 7mer-m8 CAATGCA X 7281196 7281202 - X_7281196_7281202_- 0.655500598 0.609253711 0.632377154 0.032701497 CG1677 FBtr0303415|FBtr0339819|FBtr0089712|FBtr0339820 7281087|7281087|7281087|7281087 7281438|7281438|7281438|7281438 X - 7281180 7281262 3'utr CG1677 FlyBase G65370.1 ATTCGCATCGTATTCGATATTGCCTTCGCCTGGGTGCAGCCGCTCGATCGCCATACAATTCAATGCATTTAGATTTAATAATC 53 7281203 0.990099778 12 50 506 0.948275862 1.740362689 0.103448276 0.094339623 0.172413793 53 3 0 55 X:7281180-7281262 7 CG1677 FBtr0089712|FBtr0339820|FBtr0303415|FBtr0339819 7281087|7281087|7281087|7281087 7281438|7281438|7281438|7281438 CAATGCA 7mer-m8 dme-miR-33-5p X - 7281133 7281248 3'utr CG1677 FlyBase G49232.1 CGATATTGCCTTCGCCTGGGTGCAGCCGCTCGATCGCCATACAATTCAATGCATTTAGATTTAATAATCATTATCCATTTTCCTACCCTGACTATTGCCAACTGAAGAGCATCAAT 51 7281195 0.985175751 15 38 397 0.784615385 1.707570176 0.138461538 0.254901961 0.415384615 51 14 0 51 X:7281133-7281248 7 37 3763 FBgn0029941 1454.373333 48.72333333 74.88666667 0.02544051 0.759389752 0.494079943 1 -7 -3 0.2 dme-miR-190-5p 7mer-m8 ACATATC X 7281310 7281316 - X_7281310_7281316_- 0.548286155 0.61276552 0.580525837 0.04559375 CG1677 FBtr0303415|FBtr0339819|FBtr0089712|FBtr0339820 7281087|7281087|7281087|7281087 7281438|7281438|7281438|7281438 X - 7281289 7281313 3'utr CG1677 FlyBase G65371.1 TATCCGATGGATATCGGAACGGCAT 5 7281311 0.958736298 3 3 21 0.5 0.602059991 0 0.6 0.75 5 4 0 4 X:7281289-7281313 4 CG1677 FBtr0089712|FBtr0339820|FBtr0303415|FBtr0339819 7281087|7281087|7281087|7281087 7281438|7281438|7281438|7281438 ACATATC 7mer-m8 dme-miR-190-5p X - 7281288 7281316 3'utr CG1677 FlyBase G49233.1 ACATATCCGATGGATATCGGAACGGCATC 8 7281306 0.924665961 2 6 30 0.923076923 1.079181246 0 0.375 0.615384615 8 1 0 12 X:7281288-7281316 7 6.5 3764 FBgn0029941 1454.373333 48.72333333 74.88666667 0.004469279 0.133406308 0.086797828 -5 -10 -7.5 0.2 dme-bantam-3p 7mer-m8 TGATCTC X 7288893 7288899 - X_7288893_7288899_- 0.661614964 0.661615192 0.661615078 1.41E-07 unc-119 FBtr0071066|FBtr0346619 7288678|7288365 7289145|7289145 X - 7288868 7288978 5'utr unc-119 FlyBase G65393.2 ATATTATCACAGCCATTTTAGCCTTAGCACACCAAAGTTTTACCCACCATTCCTGTTTGATGTATTTAGCATCAAGATATGATCTCCTGCAAACGGAAACTAACACACAAA 384 7288899 0.97740174 9 374 2174 0.975 2.369215857 0.05625 0.203125 0.3625 384 11 1 468 X:7288868-7288978 7 unc-119 FBtr0346619|FBtr0071066 7288365|7288678 7289145|7289145 TGATCTC 7mer-m8 dme-bantam-3p X - 7288873 7288946 5'utr unc-119 FlyBase G49250.2 CAAAGTTTTACCCACCATTCCTGTTTGATGTATTTAGCATCAAGATATGATCTCCTGCAAACGGAAACTAACAC 284 7288891 0.848882889 10 278 1575 0.972850679 2.633468456 0.076923077 0.383802817 0.604072398 284 12 0 430 X:7288873-7288946 7 327.5 3765 FBgn0025549 924.56 49.97333333 77.10666667 0.354222549 6.553495197 4.24736296 0 -8 -4 0.2 dme-miR-7-5p 7mer-A1 TCTTCCA X 7310806 7310812 + X_7310806_7310812_+ 0.817519432 0.484321572 0.650920502 0.235606424 brk FBtr0071048 7310586 7311132 X + 7310775 7310837 3'utr brk FlyBase G59506.1 AAAAAATTGTATATCTAAGCGCAAACATATATCTTCCAAGCATATCAGCAAAAAAAACCCCAA 15 7310807 0.9674289 5 14 79 1 1.230448921 0 0.133333333 0.235294118 15 0 0 17 X:7310775-7310837 7 brk FBtr0071048 7310586 7311132 TCTTCCA 7mer-A1 dme-miR-7-5p X + 7310791 7310852 3'utr brk FlyBase G45002.1 AAGCGCAAACATATATCTTCCAAGCATATCAGCAAAAAAAACCCCAAACCCTAGGTATAAAC 15 7310807 0.97708675 5 12 72 0.869565217 1.301029996 0 0.333333333 0.565217391 15 3 0 20 X:7310791-7310852 7 13 3766 FBgn0024250 227.5733333 8.686666667 13.37 0.057124443 1.496546431 0.972326103 -1 -1 -1 0.2 dme-miR-308-3p 8mer-m1 CTGTGATT X 7328137 7328144 + X_7328137_7328144_+ 0.385258283 0.385498823 0.385378553 0.000170059 Dok FBtr0071049 7327562 7328806 X + 7328114 7328344 3'utr Dok FlyBase G59524.1 GTTAATTATGTTAAATTCGTAATCTGTGATTGTATTGTTAATTGTGAAACTGTTACATTTTTAGCAAGCACTGCCCGCCACTTGATGATCGCACTCGAAAAATTCCCCCGGCTCTTACTTAAAATGTAGTGTTAAATTAAAGCAAGAGAAAAATGAAACTCAATCGAATCATGGACGTAACGAAAATTTACAAAATGTGTATGCGATTTATGCTAAATATATGTGTTTTTG 141 7328136 0.992598651 28 128 1472 0.904761905 2.181843588 0.369047619 0.177304965 0.30952381 141 16 0 152 X:7328114-7328344 8 Dok FBtr0071049 7327562 7328806 CTGTGATT 8mer-m1 dme-miR-308-3p X + 7328116 7328295 3'utr Dok FlyBase G45010.1 TAATTATGTTAAATTCGTAATCTGTGATTGTATTGTTAATTGTGAAACTGTTACATTTTTAGCAAGCACTGCCCGCCACTTGATGATCGCACTCGAAAAATTCCCCCGGCTCTTACTTAAAATGTAGTGTTAAATTAAAGCAAGAGAAAAATGAAACTCAATCGAATCATGGACGTAACG 108 7328136 0.999173397 20 97 1128 0.889570552 1.559308011 0.429447853 0.398148148 0.601226994 108 15 3 145 X:7328116-7328295 8 84 3767 FBgn0029944 523.09 18.16 27.87 0.160584221 4.625550661 3.013993541 1 1 1 0.2 dme-miR-308-3p 7mer-m1 TGTGATT X 758656 758662 + X_758656_758662_+ 0.43993283 0.502689221 0.471311025 0.044375476 CG5254 FBtr0070134|FBtr0343759 758553|758553 758719|758719 X + 758606 758671 3'utr CG5254 FlyBase G57841.1 AAGTCGATTAGTCGCGATCAATGCCATCAAGGGGATGCTACTCTTCCGATTGTGATTCGTCAATAA 47 758655 0.806305202 11 45 370 0.962264151 1.40654018 0.150943396 0.127659574 0.226415094 47 1 1 51 X:758606-758671 7 CG5254 FBtr0070134|FBtr0343759 758553|758553 758719|758719 TGTGATT 7mer-m1 dme-miR-308-3p X + 758596 758674 3'utr CG5254 FlyBase G43758.1 GTATAATAGTAAGTCGATTAGTCGCGATCAATGCCATCAAGGGGATGCTACTCTTCCGATTGTGATTCGTCAATAAATG 49 758655 0.971769121 7 49 380 1 1.886490725 0.181818182 0.326530612 0.571428571 49 0 0 77 X:758596-758674 7 35.5 3768 FBgn0040383 45.33333333 4.423333333 6.693333333 0.783088235 8.025621703 5.303784861 1 1 1 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 761419 761424 + X_761419_761424_+ 0.843296133 0.884635911 0.863966022 0.029231653 CG5273 FBtr0070137|FBtr0070136|FBtr0070135 761360|761360|761360 761939|761939|761939 X + 761383 761454 3'utr CG5273 FlyBase G57843.1 CCACTGTGCACCCACTCAATTACCCGACTACCTACTGTACCTTCCTCCCCAGCTGTTGTGGCCTTGGCGCGC 91 761418 0.75859921 10 89 574 0.981132075 2.017033339 0.245283019 0.153846154 0.273584906 91 2 0 104 X:761383-761454 6 CG5273 FBtr0070135|FBtr0070137|FBtr0070136 761360|761360|761360 761939|761939|761939 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X + 761387 761481 3'utr CG5273 FlyBase G43760.1 TGTGCACCCACTCAATTACCCGACTACCTACTGTACCTTCCTCCCCAGCTGTTGTGGCCTTGGCGCGCATATTTGCGCTGACCAACATCGATAAT 52 761418 0.759215953 10 50 312 0.987179487 1.886490725 0.217948718 0.346153846 0.564102564 52 1 0 77 X:761387-761481 6 62 3769 FBgn0040382 52 2.953333333 4.456666667 1.192307692 20.99322799 13.91174271 1 1 1 0.2 dme-miR-8-3p 7mer-m8 CAGTATT X 761536 761542 + X_761536_761542_+ 0.587140113 0.661615241 0.624377677 0.052661848 CG5273 FBtr0070137|FBtr0070136|FBtr0070135 761360|761360|761360 761939|761939|761939 X + 761507 761552 3'utr CG5273 FlyBase G57844.1 CTTGAATTATGCCGTACCATCTCCGACTACAGTATTTGTGGATAAA 9 761543 0.682774663 5 9 62 1 1 0.2 0.111111111 0.2 9 0 0 10 X:761507-761552 7 CG5273 FBtr0070135|FBtr0070137|FBtr0070136 761360|761360|761360 761939|761939|761939 CAGTATT 7mer-m8 dme-miR-8-3p X + 761496 761552 3'utr CG5273 FlyBase G43761.1 GGACAAAAACTCTTGAATTATGCCGTACCATCTCCGACTACAGTATTTGTGGATAAA 7 761543 0.982284897 6 7 53 1 0.84509804 0.428571429 0 0 7 0 0 7 X:761496-761552 7 5.5 3770 FBgn0040382 52 2.953333333 4.456666667 0.105769231 1.862302483 1.234106208 -7 -7 -7 0.2 dme-miR-308-3p 7mer-m1 TGTGATT X 761603 761609 + X_761603_761609_+ 0.521164414 0.521053427 0.521108921 7.85E-05 CG5273 FBtr0070137|FBtr0070136|FBtr0070135 761360|761360|761360 761939|761939|761939 X + 761574 761631 3'utr CG5273 FlyBase G57845.1 AAGCCCCCTTTTCCAATTTGGCCTTCAATTGTGATTGTTGCGGTGTGCATGGGCCCCG 98 761602 0.691776247 10 92 1007 0.929824561 1.326335861 0.394736842 0.112244898 0.236842105 98 4 4 106 X:761574-761631 7 CG5273 FBtr0070135|FBtr0070137|FBtr0070136 761360|761360|761360 761939|761939|761939 TGTGATT 7mer-m1 dme-miR-308-3p X + 761575 761637 3'utr CG5273 FlyBase G43762.1 AGCCCCCTTTTCCAATTTGGCCTTCAATTGTGATTGTTGCGGTGTGCATGGGCCCCGTAACCG 57 761602 0.991493225 5 54 573 0.947368421 1.653212514 0.357894737 0.543859649 0.726315789 57 4 1 90 X:761575-761637 7 76.5 3771 FBgn0040382 52 2.953333333 4.456666667 1.471153846 25.90293454 17.16529544 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 761863 761868 + X_761863_761868_+ 0.629212611 0.6198175 0.624515055 0.006643339 CG5273 FBtr0070137|FBtr0070137|FBtr0070137|FBtr0070136|FBtr0070136|FBtr0070136|FBtr0070135|FBtr0070135|FBtr0070135 761360|761360|761360|761360|761360|761360|761360|761360|761360 761939|761939|761939|761939|761939|761939|761939|761939|761939 X + 761811 761908 3'utr CG5273 FlyBase G57848.1 AGTGTGTATTTTTCTAGACTTGTTAGCGTAATTGTTGCTTGTTTTTGTATTGCTGTGAGCAAACGTATTTGTTGCACTCTTCAATTGTTGAATAAAAT 43 761833 0.993005276 10 39 473 0.903846154 1.070037867 0.211538462 0.214285714 0.365384615 42 2 3 47 X:761811-761908 6 CG5273 FBtr0070135|FBtr0070135|FBtr0070135|FBtr0070137|FBtr0070137|FBtr0070137|FBtr0070136|FBtr0070136|FBtr0070136 761360|761360|761360|761360|761360|761360|761360|761360|761360 761939|761939|761939|761939|761939|761939|761939|761939|761939 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X + 761797 761886 3'utr CG5273 FlyBase G43764.2 AAGTTCCCACTAAAAGTGTGTATTTTTCTAGACTTGTTAGCGTAATTGTTGCTTGTTTTTGTATTGCTGTGAGCAAACGTATTTGTTGCA 35 761833 0.990952476 11 33 355 0.94 1.672097858 0.22 0.371428571 0.56 35 3 0 47 X:761797-761886 6 13 3772 FBgn0040382 52 2.953333333 4.456666667 0.25 4.401805869 2.91697831 30 30 30 0.2 dme-miR-308-3p 7mer-m1 TGTGATT X 7674693 7674699 + X_7674693_7674699_+ 0.520286232 0.515537807 0.51791202 0.003357626 ct FBtr0305134|FBtr0114613|FBtr0331733|FBtr0071068 7674616|7674616|7674616|7674616 7678259|7678259|7678859|7678259 X + 7674621 7674744 3'utr ct FlyBase G59555.1 AAAAAAATTAACAGAACTAAATATAAATTCAGTGCAATGTGTAGAGAAGCGGAGATGGTTAACGCGTTTACTTGTGATTAAGTTTGAATGTTTAGACGATGTGAGGAGCCAGGAGACATACATA 63 7674692 0.937190466 16 56 444 0.903614458 1.273001272 0.313253012 0.26984127 0.445783133 63 5 3 75 X:7674621-7674744 7 ct FBtr0331733|FBtr0071068|FBtr0305134|FBtr0114613 7674616|7674616|7674616|7674616 7678859|7678259|7678259|7678259 TGTGATT 7mer-m1 dme-miR-308-3p X + 7674633 7674749 3'utr ct FlyBase G45026.1 AGAACTAAATATAAATTCAGTGCAATGTGTAGAGAAGCGGAGATGGTTAACGCGTTTACTTGTGATTAAGTTTGAATGTTTAGACGATGTGAGGAGCCAGGAGACATACATACATAT 37 7674692 0.985683366 11 33 271 0.868852459 1.72427587 0.409836066 0.432432432 0.655737705 37 8 0 53 X:7674633-7674749 7 28 3773 FBgn0004198 1981.64 22.68666667 34.95666667 0.014129711 1.234205113 0.800991704 1 1 1 0.2 dme-miR-14-3p 7mer-m8 AAGACTG X 7675081 7675087 + X_7675081_7675087_+ 0.66235276 0.658234394 0.660293577 0.002912149 ct FBtr0305134|FBtr0114613|FBtr0331733|FBtr0071068 7674616|7674616|7674616|7674616 7678259|7678259|7678859|7678259 X + 7675061 7675114 3'utr ct FlyBase G59558.1 TTTCGATTTGTTTCTACTTGAAGACTGTAAGCAAAGGCGGTAGGATTGATAACT 27 7675079 0.755817829 9 23 177 0.862068966 1.397940009 0.344827586 0.037037037 0.103448276 27 4 0 25 X:7675061-7675114 7 ct FBtr0331733|FBtr0071068|FBtr0305134|FBtr0114613 7674616|7674616|7674616|7674616 7678859|7678259|7678259|7678259 AAGACTG 7mer-m8 dme-miR-14-3p X + 7675064 7675101 3'utr ct FlyBase G45028.1 CGATTTGTTTCTACTTGAAGACTGTAAGCAAAGGCGGT 13 7675078 0.965829158 6 12 81 0.947368421 1.255272505 0.368421053 0.307692308 0.526315789 13 1 0 18 X:7675064-7675101 7 18.5 3774 FBgn0004198 1981.64 22.68666667 34.95666667 0.009335702 0.81545695 0.529226662 2 3 2.5 0.2 dme-bantam-3p 8mer-A1 TGATCTCA X 7675334 7675341 + X_7675334_7675341_+ 0.631018296 0.631086152 0.631052224 4.80E-05 ct FBtr0305134|FBtr0114613|FBtr0331733|FBtr0071068 7674616|7674616|7674616|7674616 7678259|7678259|7678859|7678259 X + 7675308 7675352 3'utr ct FlyBase G59559.1 AGCAACCGACTTGTTTAACTATCTTTTGATCTCAAGCAAAAAAAC 101 7675333 0.671724459 7 94 893 0.920634921 1.462397998 0.079365079 0.207920792 0.365079365 101 7 3 116 X:7675308-7675352 8 ct FBtr0331733|FBtr0071068|FBtr0305134|FBtr0114613 7674616|7674616|7674616|7674616 7678859|7678259|7678259|7678259 TGATCTCA 8mer-A1 dme-bantam-3p X + 7675307 7675354 3'utr ct FlyBase G45029.1 CAGCAACCGACTTGTTTAACTATCTTTTGATCTCAAGCAAAAAAACAA 64 7675333 0.97423803 8 60 507 0.944444444 1.62838893 0.033333333 0.34375 0.533333333 64 4 1 85 X:7675307-7675354 8 80 3775 FBgn0004198 1981.64 22.68666667 34.95666667 0.040370602 3.526300323 2.288547726 1 1 1 0.2 dme-miR-1012-3p 7mer-A1 TGACTAA X 7683998 7684004 - X_7683998_7684004_- 0.749035176 0.617341108 0.683188142 0.093121791 CHES-1-like FBtr0112946|FBtr0310287|FBtr0333203 7683456|7682336|7683456 7685914|7685914|7685914 X - 7683972 7684034 3'utr CHES-1-like FlyBase G65412.1 TGCCTTGATGCATATTTTGGGGAAAGAATGTGACTAAAATACCAGAAGCGAGAACAACAAAAT 33 7684006 0.972380031 4 32 189 0.975 1.591064607 0.25 0.121212121 0.275 33 1 0 39 X:7683972-7684034 7 CHES-1-like FBtr0310287|FBtr0333203|FBtr0112946 7682336|7683456|7683456 7685914|7685914|7685914 TGACTAA 7mer-A1 dme-miR-1012-3p X - 7683982 7684050 3'utr CHES-1-like FlyBase G49261.1 AATTACATAAAAATATTGCCTTGATGCATATTTTGGGGAAAGAATGTGACTAAAATACCAGAAGCGAGA 30 7684006 0.9206675 6 28 165 0.977272727 1.633468456 0.477272727 0.233333333 0.477272727 30 1 0 43 X:7683982-7684050 7 28 3776 FBgn0029504 1761.533333 36.18333333 55.28333333 0.015895243 0.773836942 0.506481761 2 2 2 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 7684309 7684314 - X_7684309_7684314_- 0.999937048 0.999997622 0.999967335 4.29E-05 CHES-1-like FBtr0112946|FBtr0310287|FBtr0333203 7683456|7682336|7683456 7685914|7685914|7685914 X - 7684251 7684363 3'utr CHES-1-like FlyBase G65414.1 CGAAAGGAAAAAAACTTGACAAAGAACGCCCTAAGTGTTTACACTTCATGTACCTTTTTAGCAAAAAGCAAAAAACGCAAAAGCAAAGATCGCATTAAAATTGTATACATACA 266 7684315 0.989886426 10 259 2554 0.975384615 1.898999271 0.101538462 0.191729323 0.338461538 266 5 3 317 X:7684251-7684363 6 CHES-1-like FBtr0310287|FBtr0333203|FBtr0112946 7682336|7683456|7683456 7685914|7685914|7685914 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X - 7684291 7684360 3'utr CHES-1-like FlyBase G49263.1 AAGGAAAAAAACTTGACAAAGAACGCCCTAAGTGTTTACACTTCATGTACCTTTTTAGCAAAAAGCAAAA 145 7684315 0.968389814 7 139 1381 0.963133641 1.621176282 0.119815668 0.35862069 0.571428571 145 4 4 209 X:7684291-7684360 6 198 3777 FBgn0029504 1761.533333 36.18333333 55.28333333 0.112402074 5.472132658 3.581549593 1 1 1 0.2 dme-miR-980-5p 7mer-A1 AAAAACA X 7684955 7684961 - X_7684955_7684961_- 0.572213658 0.374409626 0.473311642 0.13986862 CHES-1-like FBtr0112946|FBtr0071079|FBtr0310287|FBtr0333203 7683456|7684885|7682336|7683456 7685914|7685914|7685914|7685914 X - 7684935 7684990 3'utr CHES-1-like FlyBase G65417.1 AGATCCAAAACACCCTACTTACATGATCTAAAAACAAGCGATATAAAAATATATAC 19 7684967 0.963327577 5 18 97 0.95 0.977723605 0 0.052631579 0.1 19 0 1 19 X:7684935-7684990 7 CHES-1-like FBtr0310287|FBtr0333203|FBtr0112946|FBtr0071079 7682336|7683456|7683456|7684885 7685914|7685914|7685914|7685914 AAAAACA 7mer-A1 dme-miR-980-5p X - 7684941 7684991 3'utr CHES-1-like FlyBase G49267.1 AAGATCCAAAACACCCTACTTACATGATCTAAAAACAAGCGATATAAAAAT 15 7684968 0.683008575 3 12 73 0.807692308 1.322219295 0.076923077 0.466666667 0.692307692 15 5 0 21 X:7684941-7684991 7 16 3778 FBgn0029504 1761.533333 36.18333333 55.28333333 0.009082996 0.442192538 0.289418149 6 7 6.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 7685585 7685590 - X_7685585_7685590_- 0.999542809 0.829183564 0.914363186 0.120462146 CHES-1-like FBtr0112946|FBtr0112946|FBtr0112946|FBtr0071079|FBtr0071079|FBtr0071079|FBtr0310287|FBtr0310287|FBtr0310287|FBtr0333203|FBtr0333203|FBtr0333203 7683456|7683456|7683456|7684885|7684885|7684885|7682336|7682336|7682336|7683456|7683456|7683456 7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914 X - 7685564 7685602 3'utr CHES-1-like FlyBase G65419.1 AGGATTTTTTTTCTGTGACTTTACTGTGCCCCGCAATTA 7 7685592 0.99353295 5 7 78 1 1 0.2 0.428571429 0.6 7 0 0 10 X:7685564-7685602 6 CHES-1-like FBtr0310287|FBtr0310287|FBtr0310287|FBtr0333203|FBtr0333203|FBtr0333203|FBtr0112946|FBtr0112946|FBtr0112946|FBtr0071079|FBtr0071079|FBtr0071079 7682336|7682336|7682336|7683456|7683456|7683456|7683456|7683456|7683456|7684885|7684885|7684885 7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X - 7685564 7685605 3'utr CHES-1-like FlyBase G49269.1 TTTAGGATTTTTTTTCTGTGACTTTACTGTGCCCCGCAATTA 13 7685592 0.982777924 6 11 136 1 1.278753601 0.210526316 0.307692308 0.526315789 13 0 0 19 X:7685564-7685605 6 9 3779 FBgn0029504 1761.533333 36.18333333 55.28333333 0.005109185 0.248733303 0.162797709 2 2 2 0.2 dme-miR-79-3p 8mer-A1 TAGCTTTA X 7731283 7731290 + X_7731283_7731290_+ 0.609400259 0.609024016 0.609212137 0.000266084 CG12155 FBtr0071071 7731144 7731729 X + 7731255 7731350 3'utr CG12155 FlyBase G59573.1 CAAGTTCGTGGATTCCGCGTTCTTCAATTAGCTTTATCCTCCACCCACGAAACCCCGGATCCCTGTATCCTTCACCCCTCTACACCATCCATTCGA 107 7731282 0.814626075 8 104 1026 0.965811966 1.752048448 0.042735043 0.08411215 0.162393162 107 3 1 113 X:7731255-7731350 8 CG12155 FBtr0071071 7731144 7731729 TAGCTTTA 8mer-A1 dme-miR-79-3p X + 7731218 7731303 3'utr CG12155 FlyBase G45038.1 ATGTATAGGATTAGGATGCGTACCGTTTACCAGTTTGCAAGTTCGTGGATTCCGCGTTCTTCAATTAGCTTTATCCTCCACCCACG 46 7731282 0.990999509 5 43 450 0.935483871 1.286306739 0.096774194 0.260869565 0.451612903 46 2 2 58 X:7731218-7731303 8 72 3780 FBgn0029957 249.8233333 11.22666667 17.11333333 0.288203664 6.413301663 4.207245812 1 1 1 0.2 dme-miR-34-5p 6mer2-7 ACTGCC X 7896695 7896700 + X_7896695_7896700_+ 0.999195901 0.99669527 0.997945586 0.001768191 p115 FBtr0071089|FBtr0340162 7896636|7896636 7896786|7896991 X + 7896672 7896711 3'utr p115 FlyBase G59609.2 ATGTTACAACTGGAAATTGCTCGACTGCCCTAAAAACGTT 35 7896691 0.671608008 7 28 170 0.829268293 0.929418926 0.024390244 0.114285714 0.243902439 35 4 3 34 X:7896672-7896711 6 p115 FBtr0071089|FBtr0340162 7896636|7896636 7896786|7896991 ACTGCC 6mer2-7 dme-miR-34-5p X + 7896649 7896708 3'utr p115 FlyBase G45057.1 CGGATGAGTTGCTAGCCACGTACATGTTACAACTGGAAATTGCTCGACTGCCCTAAAAAC 28 7896690 0.971030347 6 25 144 0.885714286 0.792391689 0 0.214285714 0.371428571 28 0 4 31 X:7896649-7896708 6 28.5 3781 FBgn0040087 268.6666667 11.33 17.27666667 0.106079404 2.515445719 1.64962377 4 5 4.5 0.2 dme-miR-2a-2-5p 6mer3-8 TGATGA X 7921540 7921545 + X_7921540_7921545_+ 0.999884023 0.999999218 0.99994162 8.15E-05 Ykt6 FBtr0071093 7921363 7921966 X + 7921513 7921557 3'utr Ykt6 FlyBase G59657.1 TCCAAGGGAGCGGTGCGACTTGGGCTTTGATGATTGCTTTTTATA 9 7921553 0.986336974 6 9 81 1 0.954242509 0.111111111 0 0 9 0 0 9 X:7921513-7921557 6 Ykt6 FBtr0071093 7921363 7921966 TGATGA 6mer3-8 dme-miR-2a-2-5p X + 7921502 7921564 3'utr Ykt6 FlyBase G45102.1 ACCAAACAAACTCCAAGGGAGCGGTGCGACTTGGGCTTTGATGATTGCTTTTTATAAATGAAT 11 7921533 0.984549538 6 10 82 1 1.255272505 0.111111111 0.454545455 0.666666667 11 0 0 18 X:7921502-7921564 6 5.5 3782 FBgn0260858 601.62 50.32 77.46 0.009141983 0.109300477 0.071004389 -13 7 -3 0.2 dme-miR-965-3p 7mer-m8 TACGCTT X 7921678 7921684 + X_7921678_7921684_+ 0.543599221 0.620202433 0.581900827 0.054166642 Ykt6 FBtr0071093 7921363 7921966 X + 7921667 7921705 3'utr Ykt6 FlyBase G59658.1 CTGTATATGTCTACGCTTTGGATATCTAAATGTTAATTA 26 7921685 0.741762841 5 25 216 0.975 1.591064607 0.025 0.461538462 0.65 26 1 0 39 X:7921667-7921705 7 Ykt6 FBtr0071093 7921363 7921966 TACGCTT 7mer-m8 dme-miR-965-3p X + 7921663 7921697 3'utr Ykt6 FlyBase G45103.1 CTGTCTGTATATGTCTACGCTTTGGATATCTAAAT 12 7921685 0.648547452 3 12 103 1 1.278753601 0 0.5 0.684210526 12 0 0 19 X:7921663-7921697 7 19 3783 FBgn0260858 601.62 50.32 77.46 0.031581397 0.377583466 0.245287891 -7 -7 -7 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 7922994 7923000 - X_7922994_7923000_- 0.675672808 0.675649117 0.675660963 1.68E-05 CG10777 FBtr0071132|FBtr0071132|FBtr0071132 7922156|7922156|7922156 7927227|7927227|7927227 X - 7922982 7923020 3'utr CG10777 FlyBase G65464.1 AAGTTGAAACCAAAACCCATTGTGATAACAGCTGCGTAA 51 7923001 0.861246483 3 48 219 0.945454545 1.238882089 0.036363636 0.078431373 0.145454545 51 1 2 52 X:7922982-7923020 7 CG10777 FBtr0071132|FBtr0071132|FBtr0071132 7922156|7922156|7922156 7927227|7927227|7927227 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 7922951 7923017 3'utr CG10777 FlyBase G49299.1 TTGAAACCAAAACCCATTGTGATAACAGCTGCGTAAACGAAACACGTTAGAACCTTACTTGTACGTA 34 7923001 0.941499744 3 32 131 0.960784314 1.213074825 0.078431373 0.411764706 0.607843137 34 0 2 49 X:7922951-7923017 7 41.5 3784 FBgn0029979 3423.163333 51.95333333 79.74333333 0.012123289 0.798793789 0.52041968 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 7924519 7924525 - X_7924519_7924525_- 0.605018586 0.651854403 0.628436495 0.033117912 CG10777 FBtr0344137|FBtr0344137|FBtr0344137|FBtr0071132|FBtr0071132|FBtr0071132 7924137|7924137|7924137|7922156|7922156|7922156 7927227|7927227|7927227|7927227|7927227|7927227 X - 7924489 7924558 3'utr CG10777 FlyBase G65468.1 AATTATGATTTTGATGCAACCGAATTGTGATGATGTGATAGACTTATATAAACAAACGAAAATACAAAAA 364 7924520 0.807271543 10 345 2483 0.943478261 1.407040808 0.519565217 0.197802198 0.365217391 364 10 16 434 X:7924489-7924558 7 CG10777 FBtr0071132|FBtr0071132|FBtr0071132|FBtr0344137|FBtr0344137|FBtr0344137 7922156|7922156|7922156|7924137|7924137|7924137 7927227|7927227|7927227|7927227|7927227|7927227 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 7924488 7924554 3'utr CG10777 FlyBase G49303.1 ATGATTTTGATGCAACCGAATTGTGATGATGTGATAGACTTATATAAACAAACGAAAATACAAAAAT 291 7924520 0.979076325 10 287 1966 0.981351981 2.3232521 0.524475524 0.374570447 0.575757576 291 7 1 421 X:7924488-7924554 7 325 3785 FBgn0029979 3423.163333 51.95333333 79.74333333 0.094941424 6.255614013 4.075575806 -5 -5 -5 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT X 7925176 7925182 - X_7925176_7925182_- 0.657860407 0.657710715 0.657785561 0.000105854 CG10777 FBtr0344137|FBtr0071132 7924137|7922156 7927227|7927227 X - 7925147 7925210 3'utr CG10777 FlyBase G65472.1 GAGTAAATTAGTAGTAGTAACATTAATTGGCAGCTCCAGTCATATAGTTAGCAGTAATATATCC 750 7925184 0.821555035 10 731 5949 0.972619048 2.213252052 0.082142857 0.106666667 0.202380952 750 19 4 817 X:7925147-7925210 7 CG10777 FBtr0071132|FBtr0344137 7922156|7924137 7927227|7927227 GGCAGCT 7mer-m8 dme-miR-980-3p X - 7925119 7925210 3'utr CG10777 FlyBase G49308.1 GAGTAAATTAGTAGTAGTAACATTAATTGGCAGCTCCAGTCATATAGTTAGCAGTAATATATCCATATATCGTCTGTTCAAGCAGTTGTCCA 547 7925184 0.983931593 11 536 4195 0.978773585 2.317018101 0.091981132 0.402193784 0.614386792 547 15 3 830 X:7925119-7925210 7 639 3786 FBgn0029979 3423.163333 51.95333333 79.74333333 0.186669445 12.29949955 8.013209046 2 2 2 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC X 7926874 7926880 - X_7926874_7926880_- 0.659690592 0.661518493 0.660604542 0.00129252 CG10777 FBtr0344137|FBtr0071132 7924137|7922156 7927227|7927227 X - 7926853 7926946 5'utr CG10777 FlyBase G65475.1 ACCAAAATCGTTGCCTTTTTGTTTCTATATTTATTCACACCTCACTACTAATATTAGTAGAACATTTGTGTTCTCTTTCGCTTATTTAAGCATT 18 7926881 0.92980884 7 18 193 1 1.380211242 0 0.333333333 0.5 18 0 0 24 X:7926853-7926946 7 CG10777 FBtr0071132|FBtr0344137 7922156|7924137 7927227|7927227 TGTGTTC 7mer-m8 dme-miR-317-3p X - 7926857 7926893 5'utr CG10777 FlyBase G49309.1 TTAGTAGAACATTTGTGTTCTCTTTCGCTTATTTAAG 6 7926881 0.983584543 3 6 64 1 0.954242509 0.111111111 0.333333333 0.555555556 6 0 0 9 X:7926857-7926893 7 9.5 3787 FBgn0029979 3423.163333 51.95333333 79.74333333 0.002775211 0.18285641 0.119132216 1 1 1 0.2 dme-miR-33-5p 6mer2-7 AATGCA X 7953124 7953129 + X_7953124_7953129_+ 0.749271056 0.876774976 0.813023016 0.090158872 CG42593 FBtr0301748|FBtr0331298|FBtr0331299 7952244|7952295|7952244 7953883|7953883|7953883 X + 7953099 7953175 3'utr CG42593 FlyBase G59695.1 ACAATAAACGAAAAGCGAATTGTGAAATGCATAGAAACTAGTTTGCATGCCCCATTATACATAAATATTATGTAATT 258 7953118 0.822940245 7 254 979 0.981308411 2.498310554 0.23364486 0.201550388 0.358255452 258 6 0 315 X:7953099-7953175 6 CG42593 FBtr0331299|FBtr0331298|FBtr0301748 7952244|7952295|7952244 7953883|7953883|7953883 AATGCA 6mer2-7 dme-miR-33-5p X + 7953057 7953160 3'utr CG42593 FlyBase G45130.1 ATTGCAACATAAACGAAAAATGATACAAAAAAAAAAAAAAAAACAATAAACGAAAAGCGAATTGTGAAATGCATAGAAACTAGTTTGCATGCCCCATTATACAT 207 7953118 0.935431087 8 203 772 0.986531987 2.165837625 0.259259259 0.29468599 0.508417508 207 3 1 293 X:7953057-7953160 6 228.5 3788 FBgn0260970 1474.483333 18.93666667 29.07666667 0.154969537 12.06653758 7.858534908 6 6 6 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG X 8040319 8040324 - X_8040319_8040324_- 0.999207908 0.99950331 0.999355609 0.000208879 fs(1)h FBtr0071119|FBtr0333307 8038789|8037806 8040978|8040978 X - 8040256 8040469 3'utr fs(1)h FlyBase G65547.1 AAAAAAAATGGCAAATTTCCTTCGGTTAGCAAATGATTCTTCGCAATTTTTTTAAAAATCACTTACCATCTCGCTTATTATTTTGTATTAAAATTACGATTATGATGATAATGGATCGTGGCGACAAAGATGTCCGCACATGTTTCCAAAGCTTATTATTTTTAATATTATTGATTGCCTAGGCAAGTTTAGTTCGTAGGTATACACTTAATTG 59 8040327 0.854125527 29 55 523 0.893333333 1.826074803 0.253333333 0.220338983 0.386666667 59 8 0 67 X:8040256-8040469 6 fs(1)h FBtr0333307|FBtr0071119 8037806|8038789 8040978|8040978 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" X - 8040303 8040339 3'utr fs(1)h FlyBase G49359.2 TGTCCGCACATGTTTCCAAAGCTTATTATTTTTAATA 10 8040327 0.670952118 3 8 100 0.823529412 1.146128036 0 0.5 0.705882353 10 3 0 14 X:8040303-8040339 6 11 3789 FBgn0004656 6894.06 89.92333333 138.4833333 0.001595576 0.122326426 0.079431941 3 3 3 0.2 dme-miR-2a-2-5p 6mer3-8 TGATGA X 8040362 8040367 - X_8040362_8040367_- 0.989094263 0.896468242 0.942781252 0.065496543 fs(1)h FBtr0071119|FBtr0333307 8038789|8037806 8040978|8040978 X - 8040256 8040469 3'utr fs(1)h FlyBase G65547.1 AAAAAAAATGGCAAATTTCCTTCGGTTAGCAAATGATTCTTCGCAATTTTTTTAAAAATCACTTACCATCTCGCTTATTATTTTGTATTAAAATTACGATTATGATGATAATGGATCGTGGCGACAAAGATGTCCGCACATGTTTCCAAAGCTTATTATTTTTAATATTATTGATTGCCTAGGCAAGTTTAGTTCGTAGGTATACACTTAATTG 59 8040366 0.854125527 29 55 523 0.893333333 1.826074803 0.253333333 0.220338983 0.386666667 59 8 0 67 X:8040256-8040469 6 fs(1)h FBtr0333307|FBtr0071119 8037806|8038789 8040978|8040978 TGATGA 6mer3-8 dme-miR-2a-2-5p X - 8040342 8040369 3'utr fs(1)h FlyBase G49360.1 TATGATGATAATGGATCGTGGCGACAAA 8 8040360 0.600155971 4 8 37 1 0.954242509 0.222222222 0.125 0.222222222 8 0 0 9 X:8040342-8040369 6 11.5 3790 FBgn0004656 6894.06 89.92333333 138.4833333 0.001668103 0.127886718 0.083042484 -1 -7 -4 0.2 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 8047748 8047754 - X_8047748_8047754_- 0.660843698 0.660603731 0.660723715 0.000169706 fs(1)h FBtr0333309|FBtr0333308|FBtr0071118|FBtr0071120|FBtr0071121|FBtr0071122 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 X - 8047694 8047777 3'utr fs(1)h FlyBase G65563.1 TCTGTGCCAATTTCACATGTTTTTCTAGTCCTGTTTCTTGATAATTCAAATGTGTTAATCCAAGCTCCATTGTGACGATCCCTA 40 8047755 0.902335445 6 39 459 1 1.681241237 0.0625 0.125 0.270833333 40 0 0 48 X:8047694-8047777 7 fs(1)h FBtr0071121|FBtr0071122|FBtr0071120|FBtr0071118|FBtr0333309|FBtr0333308 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X - 8047736 8047769 3'utr fs(1)h FlyBase G49371.1 AATTTCACATGTTTTTCTAGTCCTGTTTCTTGAT 31 8047755 0.691819958 6 31 369 1 1.681241237 0.041666667 0.419354839 0.625 31 0 0 48 X:8047736-8047769 7 33 3791 FBgn0004656 6894.06 89.92333333 138.4833333 0.004786729 0.366979279 0.238295824 1 1 1 0.2 dme-miR-282-5p 6mer3-8 AGAGGC X 8048006 8048011 - X_8048006_8048011_- 0.935009907 0.843633643 0.889321775 0.064612801 fs(1)h FBtr0333309|FBtr0333308|FBtr0071118|FBtr0071120|FBtr0071121|FBtr0071122 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 X - 8047965 8048028 3'utr fs(1)h FlyBase G65564.1 ATGAGTATATATATCTCAGAGGCAGCTTACTAGCAATCTTCATCGATCATCATTATATCCATTC 37 8048000 0.978616371 5 33 229 0.871794872 1.054357662 0.025641026 0.054054054 0.102564103 37 3 2 34 X:8047965-8048028 6 fs(1)h FBtr0071121|FBtr0071122|FBtr0071120|FBtr0071118|FBtr0333309|FBtr0333308 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 AGAGGC 6mer3-8 dme-miR-282-5p X - 8047953 8048028 3'utr fs(1)h FlyBase G49372.1 ATGAGTATATATATCTCAGAGGCAGCTTACTAGCAATCTTCATCGATCATCATTATATCCATTCACCACTCCCCCA 30 8048000 0.975591747 7 27 176 0.913043478 1.62324929 0 0.433333333 0.630434783 30 4 0 42 X:8047953-8048028 6 32 3792 FBgn0004656 6894.06 89.92333333 138.4833333 0.004641677 0.355858694 0.231074738 -11 -11 -11 0.2 dme-miR-2a-2-5p 6mer3-8 TGATGA X 8049214 8049219 - X_8049214_8049219_- 0.957702844 0.997869786 0.977786315 0.028402358 fs(1)h FBtr0333309|FBtr0333308|FBtr0071118|FBtr0071120|FBtr0071121|FBtr0071122 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 X - 8049208 8049247 3'utr fs(1)h FlyBase G65569.1 AAATTGAAACTTCCATTTGCCAATCGTCTGATGACTGATA 6 8049231 0.964691336 4 4 49 0.625 0.698970004 0 0.333333333 0.5 6 3 0 5 X:8049208-8049247 6 fs(1)h FBtr0071121|FBtr0071122|FBtr0071120|FBtr0071118|FBtr0333309|FBtr0333308 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 TGATGA 6mer3-8 dme-miR-2a-2-5p X - 8049206 8049233 3'utr fs(1)h FlyBase G49376.1 ATTTGCCAATCGTCTGATGACTGATATG 6 8049231 0.738476468 5 5 39 0.8 0.903089987 0 0.5 0.7 6 2 0 8 X:8049206-8049233 6 6 3793 FBgn0004656 6894.06 89.92333333 138.4833333 0.000870314 0.066723505 0.043326513 12 12 12 0.2 dme-miR-34-5p 7mer-A1 ACTGCCA X 8069173 8069179 + X_8069173_8069179_+ 0.80460633 0.813840494 0.809223412 0.006529565 mys FBtr0340135|FBtr0340137|FBtr0071105|FBtr0340136 8068934|8068934|8068934|8068934 8070237|8070237|8070237|8070237 X + 8069129 8069211 3'utr mys FlyBase G59706.1 CATCGACGAAGCTGCTTTGCCCGGGTGCAAAACCACTGAAGTCAACTGCCATTGAAACGCGTTCTAAACTAAGTCAGCCCTAT 68 8069180 0.844709416 8 68 285 1 1.986771734 0.195876289 0.294117647 0.505154639 68 0 0 97 X:8069129-8069211 7 mys FBtr0071105|FBtr0340136|FBtr0340135|FBtr0340137 8068934|8068934|8068934|8068934 8070237|8070237|8070237|8070237 ACTGCCA 7mer-A1 dme-miR-34-5p X + 8069133 8069209 3'utr mys FlyBase G45139.1 GACGAAGCTGCTTTGCCCGGGTGCAAAACCACTGAAGTCAACTGCCATTGAAACGCGTTCTAAACTAAGTCAGCCCT 63 8069180 0.949332646 11 62 269 0.990196078 2.004321374 0.264705882 0.428571429 0.647058824 63 1 0 101 X:8069133-8069209 7 60 3794 FBgn0004657 3546.84 102.2566667 157.0266667 0.016916466 0.58675881 0.382100705 -7 -7 -7 0.2 dme-miR-33-5p 6mer3-8 CAATGC X 8069721 8069726 + X_8069721_8069726_+ 0.991582802 0.547473356 0.769528079 0.314032768 mys FBtr0340135|FBtr0340137|FBtr0071105|FBtr0340136 8068934|8068934|8068934|8068934 8070237|8070237|8070237|8070237 X + 8069684 8069743 3'utr mys FlyBase G59710.1 AACTAATCTGCTACCCTCCCAAAACGGTCGTCCTTCGCAATGCCAAACCCCCCAACGTCT 45 8069717 0.939313451 6 45 200 1 1.69019608 0.306122449 0.088888889 0.163265306 45 0 0 49 X:8069684-8069743 6 mys FBtr0071105|FBtr0340136|FBtr0340135|FBtr0340137 8068934|8068934|8068934|8068934 8070237|8070237|8070237|8070237 CAATGC 6mer3-8 dme-miR-33-5p X + 8069682 8069752 3'utr mys FlyBase G45141.1 TTAACTAATCTGCTACCCTCCCAAAACGGTCGTCCTTCGCAATGCCAAACCCCCCAACGTCTTAATGTTTT 24 8069717 0.748701495 8 21 125 0.810810811 1.477121255 0.351351351 0.416666667 0.621621622 24 7 0 30 X:8069682-8069752 6 17 3795 FBgn0004657 3546.84 102.2566667 157.0266667 0.004792999 0.166248329 0.108261866 4 4 4 0.2 dme-miR-263a-5p 7mer-m1 TGCCATT X 8070017 8070023 + X_8070017_8070023_+ 0.765528563 0.754185363 0.759856963 0.008020854 mys FBtr0340135|FBtr0340137|FBtr0071105|FBtr0340136 8068934|8068934|8068934|8068934 8070237|8070237|8070237|8070237 X + 8070007 8070052 3'utr mys FlyBase G59712.1 ATATATTTTTTGCCATTTGTACTGATTACTGATTAACATTTAAAGT 67 8070023 0.642860456 12 64 695 0.949367089 1.574031268 0.050632911 0.149253731 0.278481013 67 3 1 75 X:8070007-8070052 7 mys FBtr0071105|FBtr0340136|FBtr0340135|FBtr0340137 8068934|8068934|8068934|8068934 8070237|8070237|8070237|8070237 TGCCATT 7mer-m1 dme-miR-263a-5p X + 8070003 8070047 3'utr mys FlyBase G45143.1 AAATATATATTTTTTGCCATTTGTACTGATTACTGATTAACATTT 41 8070023 0.729219999 10 36 433 0.859375 1.439332694 0.046875 0.390243902 0.609375 41 8 1 55 X:8070003-8070047 7 48 3796 FBgn0004657 3546.84 102.2566667 157.0266667 0.013533173 0.469407048 0.305680564 -6 -6 -6 0.2 dme-miR-252-5p 6mer3-8 GTACTT X 8070346 8070351 - X_8070346_8070351_- 0.998994785 0.99940667 0.999200728 0.000291257 Upf2 FBtr0071117 8070242 8071284 X - 8070325 8070365 3'utr Upf2 FlyBase G65602.1 TGCATTGATGCTAGGTACTTTATCTCATGTTGTATAAGAAA 13 8070338 0.628639137 4 12 138 0.923076923 1.079181246 0.153846154 0 0 13 1 0 12 X:8070325-8070365 6 Upf2 FBtr0071117 8070242 8071284 GTACTT 6mer3-8 dme-miR-252-5p X - 8070326 8070364 3'utr Upf2 FlyBase G49403.1 GCATTGATGCTAGGTACTTTATCTCATGTTGTATAAGAA 6 8070338 0.640406874 3 6 60 1 1.041392685 0.363636364 0.666666667 0.818181818 6 0 0 11 X:8070326-8070364 6 9.5 3797 FBgn0029992 611.4266667 14.48666667 22.18333333 0.015537432 0.655775426 0.428249437 -13 -13 -13 0.2 dme-miR-986-5p 6mer3-8 ATTCGA X 8089060 8089065 - X_8089060_8089065_- 0.984908314 0.988046874 0.986477594 0.002219325 UbcE2H FBtr0071113|FBtr0071114|FBtr0071112 8088007|8088007|8087542 8089308|8089308|8089308 X - 8089034 8089105 5'utr UbcE2H FlyBase G65632.1 ATAATTGATAAATGATAATTGGATTTTAAGATAGAAAGTGATTCGATGATGGCGTGTGATGATCAGCGCACA 28 8089063 0.795574029 9 27 191 0.96875 1.491361694 0.25 0.142857143 0.25 28 1 0 31 X:8089034-8089105 6 UbcE2H FBtr0071114|FBtr0071112|FBtr0071113 8088007|8087542|8088007 8089308|8089308|8089308 ATTCGA 6mer3-8 dme-miR-986-5p X - 8089036 8089105 5'utr UbcE2H FlyBase G49421.1 ATAATTGATAAATGATAATTGGATTTTAAGATAGAAAGTGATTCGATGATGGCGTGTGATGATCAGCGCA 26 8089063 0.952230889 8 26 174 1 1.612783857 0.170731707 0.384615385 0.609756098 26 0 0 41 X:8089036-8089105 6 24 3798 FBgn0029996 2080.593333 98.34666667 150.9166667 0.011535171 0.244034707 0.159028161 -2 -2 -2 0.2 dme-miR-995-5p 7mer-m1 ATTCGGG X 8103466 8103472 - X_8103466_8103472_- 0.608633265 0.776558925 0.692596095 0.11874133 Gclc FBtr0071107|FBtr0340138|FBtr0071108|FBtr0340139 8102580|8102179|8102580|8102580 8103531|8103531|8103531|8103531 X - 8103449 8103534 stop_codon Gclc FlyBase G65652.1 TGATCGAGGAGCGCGCTGCGGACGCGTTCAGCGCAGCTGGCCGCCGGTGGCCGGCGCATGTGATTCGGGTTTTGTGGGTCCGTTCG 37 8103470 0.973353604 9 37 223 1 1.579783597 0.605263158 0.027027027 0.052631579 37 0 0 38 X:8103449-8103534 7 Gclc FBtr0071107|FBtr0340138|FBtr0071108|FBtr0340139 8102580|8102179|8102580|8102580 8103531|8103531|8103531|8103531 ATTCGGG 7mer-m1 dme-miR-995-5p X - 8103452 8103515 3'utr Gclc FlyBase G49434.1 GGACGCGTTCAGCGCAGCTGGCCGCCGGTGGCCGGCGCATGTGATTCGGGTTTTGTGGGTCCGT 20 8103470 0.978080341 5 20 137 1 1.431363764 0.518518519 0.3 0.481481481 20 0 0 27 X:8103452-8103515 7 25 3799 FBgn0040319 793.1366667 24.97666667 38.58666667 0.031520419 1.000934205 0.647892191 -2 -2 -2 0.2 dme-miR-277-3p 7mer-m8 TGCATTT X 8143958 8143964 - X_8143958_8143964_- 0.497404669 0.533804729 0.515604699 0.025738687 CG2263 FBtr0071190 8143902 8143998 X - 8143932 8143982 3'utr CG2263 FlyBase G65687.1 TAGGACCTGCGATCAAATTGCATTTTTTTTCACACATGAATGTTCCAAAAC 15 8143965 0.847275386 3 14 140 0.933333333 1.146128036 0.533333333 0 0 15 1 0 14 X:8143932-8143982 7 CG2263 FBtr0071190 8143902 8143998 TGCATTT 7mer-m8 dme-miR-277-3p X - 8143932 8143981 3'utr CG2263 FlyBase G49455.1 AGGACCTGCGATCAAATTGCATTTTTTTTCACACATGAATGTTCCAAAAC 5 8143965 0.984478007 3 5 39 1 0.84509804 0 0.4 0.571428571 5 0 0 7 X:8143932-8143981 7 8.5 3800 FBgn0030007 507.0733333 36.52333333 55.98333333 0.016762861 0.232727936 0.151830902 1 1 1 0.2 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 8154902 8154907 - X_8154902_8154907_- 0.999851134 0.999141377 0.999496256 0.000501834 Traf6 FBtr0071188 8154597 8155833 X - 8154889 8154953 3'utr Traf6 FlyBase G65698.1 AAAACTAGTAATGAGTGAACCGACCAGCGCATAGAATATAAAATATGTACCTTTTTTGAAAACAA 23 8154900 0.849004415 8 22 190 0.961538462 1.096910013 0.038461538 0.086956522 0.192307692 23 0 1 25 X:8154889-8154953 6 Traf6 FBtr0071188 8154597 8155833 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X - 8154893 8154952 3'utr Traf6 FlyBase G49467.1 AAACTAGTAATGAGTGAACCGACCAGCGCATAGAATATAAAATATGTACCTTTTTTGAAA 25 8154908 0.89132802 5 24 199 0.96969697 1.505149978 0.212121212 0.2 0.393939394 25 1 0 32 X:8154893-8154952 6 18.5 3801 FBgn0265464 124.9866667 5.45 8.333333333 0.148015788 3.394495413 2.22 -7 1 -3 0.2 dme-miR-2a-2-5p 6mer3-8 TGATGA X 8155326 8155331 - X_8155326_8155331_- 0.55125712 0.583545524 0.567401322 0.022831347 Traf6 FBtr0071188 8154597 8155833 X - 8155267 8155348 3'utr Traf6 FlyBase G65700.1 ATCACATTAAGCAATCTTGATGATATTCAAATACTAATCGATATTAGCCTAGTATCCTAGAACTATCTCTTATTCTCTATTT 19 8155332 0.735306946 9 18 135 0.96 1.380211242 0 0.263157895 0.44 19 1 0 24 X:8155267-8155348 6 Traf6 FBtr0071188 8154597 8155833 TGATGA 6mer3-8 dme-miR-2a-2-5p X - 8155264 8155350 3'utr Traf6 FlyBase G49469.1 GCATCACATTAAGCAATCTTGATGATATTCAAATACTAATCGATATTAGCCTAGTATCCTAGAACTATCTCTTATTCTCTATTTGTA 13 8155330 0.973907883 7 13 106 1 1.230448921 0.176470588 0.307692308 0.470588235 13 0 0 17 X:8155264-8155350 6 9.5 3802 FBgn0265464 124.9866667 5.45 8.333333333 0.076008108 1.743119266 1.14 1 -1 0 0.2 dme-miR-1003-3p 7mer-A1 TGTGAGA X 8158724 8158730 + X_8158724_8158730_+ 0.504025807 0.580649407 0.542337607 0.054181067 GIIIspla2 FBtr0303457|FBtr0345987 8158376|8158376 8159017|8159348 X + 8158708 8158750 3'utr GIIIspla2 FlyBase G59745.1 ACTTAGATGAACAGATTGTGAGAGGAGGAGGAGGAGAGACAGC 22 8158723 0.925315658 3 19 65 0.75862069 1.041392685 0.551724138 0.181818182 0.379310345 22 6 1 22 X:8158708-8158750 7 GIIIspla2 FBtr0345987|FBtr0303457 8158376|8158376 8159348|8159017 TGTGAGA 7mer-A1 dme-miR-1003-3p X + 8158690 8158750 3'utr GIIIspla2 FlyBase G45170.1 AACACCATCATCATCCGTACTTAGATGAACAGATTGTGAGAGGAGGAGGAGGAGAGACAGC 16 8158723 0.903345565 4 14 45 0.935483871 1.462397998 0.451612903 0.6875 0.838709677 16 2 0 29 X:8158690-8158750 7 18 3803 FBgn0030013 187 19.04 29.33333333 0.096256684 0.945378151 0.613636364 1 1 1 0.2 dme-miR-276a-3p 7mer-A1 GTTCCTA X 8171293 8171299 - X_8171293_8171299_- 0.555986234 0.629197913 0.592592073 0.05176849 slpr FBtr0303842|FBtr0303843|FBtr0303844|FBtr0071184 8170677|8170227|8170677|8170677 8171581|8171581|8171581|8171581 X - 8171285 8171315 3'utr slpr FlyBase G65706.1 TCATAATAACCGAATTGTTCCTAACGAATGC 12 8171300 0.694288973 3 11 65 0.933333333 1.146128036 0 0.166666667 0.333333333 12 1 0 14 X:8171285-8171315 7 slpr FBtr0303842|FBtr0303843|FBtr0303844|FBtr0071184 8170677|8170227|8170677|8170677 8171581|8171581|8171581|8171581 GTTCCTA 7mer-A1 dme-miR-276a-3p X - 8171274 8171313 3'utr slpr FlyBase G49473.1 ATAATAACCGAATTGTTCCTAACGAATGCAATATGTTGTG 10 8171300 0.963992488 4 10 53 1 1.204119983 0 0.4 0.625 10 0 0 16 X:8171274-8171313 7 11 3804 FBgn0030018 811.23 18.14 27.89 0.013559656 0.606394708 0.394406597 1 1 1 0.2 dme-miR-980-3p 7mer-m8 GGCAGCT X 8239111 8239117 + X_8239111_8239117_+ 0.653234239 0.653567141 0.65340069 0.000235396 sdt FBtr0100376|FBtr0089975|FBtr0089978|FBtr0340141|FBtr0333720|FBtr0333721|FBtr0308218|FBtr0308219|FBtr0340142|FBtr0308217|FBtr0111034|FBtr0100375|FBtr0308220|FBtr0089974 8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445 8239427|8239427|8240474|8239427|8240474|8239427|8239427|8239427|8240474|8239427|8239427|8239427|8239427|8240474 X + 8239073 8239130 3'utr sdt FlyBase G59752.1 AGCGACTCCGAATGTTAACAGAGCCAGAACAATCCGTAGGCAGCTGTGCGAGGGGAGA 11 8239109 0.899253583 2 11 33 1 1.041392685 0.636363636 0 0 11 0 0 11 X:8239073-8239130 7 sdt FBtr0308220|FBtr0089974|FBtr0111034|FBtr0100375|FBtr0308219|FBtr0089975|FBtr0308217|FBtr0333720|FBtr0100376|FBtr0089978|FBtr0308218|FBtr0340141|FBtr0333721|FBtr0340142 8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445 8239427|8240474|8239427|8239427|8239427|8239427|8239427|8240474|8239427|8240474|8239427|8239427|8239427|8240474 GGCAGCT 7mer-m8 dme-miR-980-3p X + 8239092 8239144 3'utr sdt FlyBase G45177.1 AGAGCCAGAACAATCCGTAGGCAGCTGTGCGAGGGGAGATCGATCCGTCGGAT 7 8239109 0.923354171 3 7 24 1 1.113943352 0.615384615 0.714285714 0.846153846 7 0 0 13 X:8239092-8239144 7 8 3805 FBgn0261873 288.2033333 5.556666667 8.47 0.02775818 1.439712058 0.944510035 2 2 2 0.2 dme-miR-282-5p 6mer2-7 GAGGCT X 8275823 8275828 + X_8275823_8275828_+ 0.836363213 0.581815423 0.709089318 0.179992476 CG1636 FBtr0339833|FBtr0071171 8275361|8275361 8276450|8276201 X + 8275771 8275856 3'utr CG1636 FlyBase G59775.1 AAATCAAACGTGCAGATAATCTCAAAGGCTATATACGCAAAAATCGAAAAGTGAGGCTTACAAAATTAATCTCCTAGAAGTATTTA 63 8275822 0.933545604 7 60 289 0.957746479 1.531478917 0.056338028 0.095238095 0.197183099 63 2 1 68 X:8275771-8275856 6 CG1636 FBtr0339833|FBtr0071171 8275361|8275361 8276450|8276201 GAGGCT 6mer2-7 dme-miR-282-5p X + 8275775 8275855 3'utr CG1636 FlyBase G45196.1 CAAACGTGCAGATAATCTCAAAGGCTATATACGCAAAAATCGAAAAGTGAGGCTTACAAAATTAATCTCCTAGAAGTATTT 45 8275822 0.948411095 5 45 180 1 1.819543936 0.090909091 0.422222222 0.606060606 45 0 0 66 X:8275775-8275855 6 41 3806 FBgn0030030 151.2133333 8.68 13.2 0.271140111 4.723502304 3.106060606 1 1 1 0.2 dme-miR-995-5p 7mer-m8 AATTCGG X 8403060 8403066 + X_8403060_8403066_+ 0.669629923 0.665951175 0.667790549 0.002601234 CG10555 FBtr0071174|FBtr0343353 8402563|8402563 8403942|8404516 X + 8402999 8403093 3'utr CG10555 FlyBase G59784.1 AGCAGCGAATTCCTCGAATTTCGAACTGAACTGTACGAAAGTTGCAGGCAGTTTTTTTTTAAATTCGGTGATAAATAGCAGAAGCAAGTAGCAGG 34 8403062 0.819490487 10 32 242 0.975 1.591064607 0.4 0.117647059 0.25 34 1 0 39 X:8402999-8403093 7 CG10555 FBtr0343353|FBtr0071174 8402563|8402563 8404516|8403942 AATTCGG 7mer-m8 dme-miR-995-5p X + 8403053 8403083 3'utr CG10555 FlyBase G45200.1 TTTTTTAAATTCGGTGATAAATAGCAGAAGC 11 8403062 0.767484927 2 10 71 0.933333333 1.146128036 0.533333333 0.363636364 0.533333333 11 1 0 14 X:8403053-8403083 7 17 3807 FBgn0030034 842.1066667 21.32333333 32.79333333 0.020187466 0.79724871 0.518398048 -2 -2 -2 0.2 dme-miR-1008-3p 6mer2-7 GCTGTG X 8408015 8408020 - X_8408015_8408020_- 0.906235907 0.781272193 0.84375405 0.08836268 lawc FBtr0071248|FBtr0302081|FBtr0307287|FBtr0307286 8408006|8408006|8408006|8408006 8409752|8409752|8409752|8409752 X - 8408008 8408041 3'utr lawc FlyBase G65738.1 TATACATAATAATAAATGATCGCTGTGTTTATGC 13 8408022 0.808062838 4 12 104 0.944444444 1.230448921 0 0.307692308 0.5 13 1 0 17 X:8408008-8408041 6 lawc FBtr0071248|FBtr0302081|FBtr0307287|FBtr0307286 8408006|8408006|8408006|8408006 8409752|8409752|8409752|8409752 GCTGTG 6mer2-7 dme-miR-1008-3p X - 8408008 8408041 3'utr lawc FlyBase G49498.1 TATACATAATAATAAATGATCGCTGTGTTTATGC 15 8408014 0.622255502 6 13 120 0.869565217 1.301029996 0 0.4 0.608695652 15 3 0 20 X:8408008-8408041 6 14 3808 FBgn0262976 211.98 11.61333333 17.8 0.066043966 1.205510907 0.786516854 2 -6 -2 0.2 dme-miR-14-3p 7mer-m8 AAGACTG X 8408092 8408098 - X_8408092_8408098_- 0.50765994 0.423368402 0.465514171 0.059603091 lawc FBtr0071248|FBtr0302081|FBtr0307287|FBtr0307286 8408006|8408006|8408006|8408006 8409752|8409752|8409752|8409752 X - 8408069 8408308 3'utr lawc FlyBase G65739.1 AATAATTTCAAGGAGAAGATGTTTTTGTGGTCAAAAACGTGCAGATGACTTCTAAGAAGTTGGAAAATCATGTATTTACTCGGAAAGAAGCCAGAACTGAAGTAGCATACTTATTAGTATTATCAAATGATGAGTTTTTTCATCATAGTTTTAGTTCTATATTTATAGAAAAAAAAAACTTTCCTTGTTACTTTTAGTTTTTTCATTTGAAAGACTGCCGTTGACTTTTTCATTTTATTC 59 8408103 0.982688276 23 56 436 0.938461538 1.785329835 0.092307692 0.101694915 0.184615385 59 4 0 61 X:8408069-8408308 7 lawc FBtr0071248|FBtr0302081|FBtr0307287|FBtr0307286 8408006|8408006|8408006|8408006 8409752|8409752|8409752|8409752 AAGACTG 7mer-m8 dme-miR-14-3p X - 8408078 8408146 3'utr lawc FlyBase G49499.1 TTATAGAAAAAAAAAACTTTCCTTGTTACTTTTAGTTTTTTCATTTGAAAGACTGCCGTTGACTTTTTC 30 8408103 0.728668305 14 29 265 0.979591837 1.681241237 0.040816327 0.466666667 0.673469388 30 1 0 48 X:8408078-8408146 7 27 3809 FBgn0262976 211.98 11.61333333 17.8 0.127370507 2.324913892 1.516853933 5 5 5 0.2 dme-miR-263a-5p 6mer3-8 GTGCCA X 8429129 8429134 + X_8429129_8429134_+ 0.994941818 0.999799382 0.9973706 0.003434842 Trf2 FBtr0300577|FBtr0330106|FBtr0333811|FBtr0330105|FBtr0112927|FBtr0333750 8429114|8429114|8429114|8429114|8429114|8429114 8433011|8433011|8430195|8430195|8430195|8430195 X + 8429030 8429141 stop_codon Trf2 FlyBase G59811.1 AACAGACCAGCTTCTCGCCCAGCGAATTCGATGTTGATGACTTGATCGAGGAGGAGGAGAACAACGAATTGGATATGCCCTTCTAAGCTAGCGCTGCCCGTGCCAAAAAAAA 13 8429129 0.952630486 10 13 62 1 1.146128036 0.142857143 0.076923077 0.142857143 13 0 0 14 X:8429030-8429141 6 Trf2 FBtr0112927|FBtr0333750|FBtr0300577|FBtr0330106|FBtr0333811|FBtr0330105 8429114|8429114|8429114|8429114|8429114|8429114 8430195|8430195|8433011|8433011|8430195|8430195 GTGCCA 6mer3-8 dme-miR-263a-5p X + 8429097 8429144 stop_codon Trf2 FlyBase G45213.1 ATTGGATATGCCCTTCTAAGCTAGCGCTGCCCGTGCCAAAAAAAAATT 6 8429127 0.906291225 3 5 22 1 0.954242509 0 0.8 0.888888889 5 0 0 9 X:8429097-8429144 6 5.5 3810 FBgn0261793 2407.63 30.94 47.70333333 0.002284404 0.177763413 0.115295926 0 2 1 0.2 dme-miR-2b-2-5p 7mer-A1 TGAAGAA X 8429966 8429972 + X_8429966_8429972_+ 0.82334953 0.616188459 0.719768994 0.146484948 Trf2 FBtr0300577|FBtr0330106|FBtr0333811|FBtr0330105|FBtr0112927|FBtr0333750 8429114|8429114|8429114|8429114|8429114|8429114 8433011|8433011|8430195|8430195|8430195|8430195 X + 8429909 8429988 3'utr Trf2 FlyBase G59818.1 ATCCGTGGAGAGGAGGTGGGGCCAGAGAAAAGCCCACTAGGATAGTTATCAATTATCTGAAGAACAACTGATTAATTTCT 20 8429980 0.97368226 10 18 102 0.928571429 1.414973348 0.071428571 0.3 0.5 20 2 0 26 X:8429909-8429988 7 Trf2 FBtr0112927|FBtr0333750|FBtr0300577|FBtr0330106|FBtr0333811|FBtr0330105 8429114|8429114|8429114|8429114|8429114|8429114 8430195|8430195|8433011|8433011|8430195|8430195 TGAAGAA 7mer-A1 dme-miR-2b-2-5p X + 8429952 8429985 3'utr Trf2 FlyBase G45218.1 AGTTATCAATTATCTGAAGAACAACTGATTAATT 9 8429980 0.647813594 4 9 48 1 1.204119983 0 0.666666667 0.8125 9 0 0 16 X:8429952-8429985 7 11 3811 FBgn0261793 2407.63 30.94 47.70333333 0.004568808 0.355526826 0.230591852 -14 -14 -14 0.2 dme-miR-276a-3p 6mer2-7 GTTCCT X 8430443 8430448 + X_8430443_8430448_+ 0.889994608 0.909690354 0.899842481 0.013927034 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 X + 8430418 8430462 3'utr Trf2 FlyBase G59822.1 CGCTTAAGTGTAGATTTACAAACTTGTTCCTGTGTTGTTAAAATC 189 8430443 0.745467116 12 184 2059 0.976851852 1.625312451 0.162037037 0.121693122 0.231481481 189 1 4 211 X:8430418-8430462 6 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 GTTCCT 6mer2-7 dme-miR-276a-3p X + 8430419 8430466 3'utr Trf2 FlyBase G45223.1 GCTTAAGTGTAGATTTACAAACTTGTTCCTGTGTTGTTAAAATCAGAA 121 8430442 0.76049186 9 115 1286 0.947916667 1.561101384 0.135416667 0.41322314 0.630208333 121 6 4 182 X:8430419-8430466 6 153.5 3812 FBgn0261793 2407.63 30.94 47.70333333 0.063755644 4.961215255 3.217804486 0 1 0.5 0.2 dme-miR-14-3p 7mer-m8 AAGACTG X 8431992 8431998 + X_8431992_8431998_+ 0.671215579 0.670453805 0.670834692 0.000538674 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 X + 8431959 8432106 3'utr Trf2 FlyBase G59829.1 CAAATAGCATAATTCTGTTTTTGTTTTGCCGTAAAGACTGCATTATACCAACAATTAATTATATACAAACATAATAAATAATTAACTGATAAATGGGGCGAGTAAGCTTTGCAACTAAGCTGAGAACAAAACGGATGGATAAACATTT 73 8432001 0.981840352 17 71 510 0.965116279 1.919078092 0.023255814 0.164383562 0.290697674 73 3 0 83 X:8431959-8432106 7 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 AAGACTG 7mer-m8 dme-miR-14-3p X + 8431961 8432014 3'utr Trf2 FlyBase G45229.1 AATAGCATAATTCTGTTTTTGTTTTGCCGTAAAGACTGCATTATACCAACAATT 42 8432001 0.970298474 12 41 314 0.982758621 1.755874856 0 0.30952381 0.5 42 1 0 57 X:8431961-8432014 7 51 3813 FBgn0261793 2407.63 30.94 47.70333333 0.021182657 1.648351648 1.069107679 -9 -9 -9 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 8432299 8432304 + X_8432299_8432304_+ 0.978561426 0.934128138 0.956344782 0.031419088 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 X + 8432277 8432319 3'utr Trf2 FlyBase G59831.1 AAAAGCAAGATGAAATTACCTTACCAAAATGTGCTAGCCCTCG 5 8432293 0.886551134 3 5 27 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 X:8432277-8432319 6 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 8432274 8432320 3'utr Trf2 FlyBase G45230.1 ACGAAAAGCAAGATGAAATTACCTTACCAAAATGTGCTAGCCCTCGA 6 8432306 0.973596674 3 6 38 1 0.903089987 0.375 0.333333333 0.5 6 0 0 8 X:8432274-8432320 6 5.5 3814 FBgn0261793 2407.63 30.94 47.70333333 0.002284404 0.177763413 0.115295926 6 -7 -0.5 0.2 dme-miR-277-3p 6mer3-8 TGCATT X 8441353 8441358 - X_8441353_8441358_- 0.982190719 0.99125869 0.986724705 0.006412044 CG12123 FBtr0071245 8441245 8441410 X - 8441336 8441371 3'utr CG12123 FlyBase G65747.1 AAAAATTGTAAATTGCATTAGGTGGTCACGATTCGA 5 8441355 0.878273102 4 5 30 1 0.84509804 0.142857143 0.4 0.571428571 5 0 0 7 X:8441336-8441371 6 CG12123 FBtr0071245 8441245 8441410 TGCATT 6mer3-8 dme-miR-277-3p X - 8441341 8441370 3'utr CG12123 FlyBase G49507.1 AAAATTGTAAATTGCATTAGGTGGTCACGA 7 8441358 0.681940397 4 6 47 0.916666667 1.041392685 0 0.571428571 0.75 7 1 0 11 X:8441341-8441370 6 6 3815 FBgn0030039 53.33333333 6.263333333 9.543333333 0.1125 0.95795636 0.628711142 -3 0 -1.5 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 8448086 8448092 - X_8448086_8448092_- 0.763576453 0.806304909 0.784940681 0.030213541 org-1 FBtr0345983|FBtr0071244 8447689|8447839 8448232|8448232 X - 8448064 8448106 3'utr org-1 FlyBase G65752.1 GTGTAAATCTCATGCCAAAGATTCGTTCTAAAATCAAGAATCT 11 8448094 0.944310903 2 9 79 0.833333333 1 0.25 0.090909091 0.166666667 11 2 0 10 X:8448064-8448106 7 org-1 FBtr0071244|FBtr0345983 8447839|8447689 8448232|8448232 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X - 8448074 8448108 3'utr org-1 FlyBase G49509.1 ATGTGTAAATCTCATGCCAAAGATTCGTTCTAAAA 8 8448094 0.854662071 2 7 47 0.916666667 1.041392685 0.166666667 0.5 0.666666667 8 1 0 11 X:8448074-8448108 7 9.5 3816 FBgn0021767 5 0.183333333 0.283333333 1.9 51.81818182 33.52941176 2 2 2 0.2 dme-miR-283-5p 8mer-A1 TGATATTA X 8558901 8558908 - X_8558901_8558908_- 0.591821964 0.592192285 0.592007124 0.000261842 CG12112 FBtr0071233|FBtr0331727 8558877|8558877 8559220|8559220 X - 8558884 8558930 3'utr CG12112 FlyBase G65765.1 AATATAATTATTAAATGCCTGGTGATATTAGCATTATCACTCTTGTG 42 8558903 0.646701988 7 40 325 0.945454545 1.716003344 0.018181818 0.261904762 0.436363636 42 3 0 52 X:8558884-8558930 8 CG12112 FBtr0331727|FBtr0071233 8558877|8558877 8559220|8559220 TGATATTA 8mer-A1 dme-miR-283-5p X - 8558883 8558935 3'utr CG12112 FlyBase G49515.1 AAAATAATATAATTATTAAATGCCTGGTGATATTAGCATTATCACTCTTGTGA 28 8558902 0.662221473 8 27 228 1 1.602059991 0 0.285714286 0.5 28 0 0 40 X:8558883-8558935 8 34.5 3817 FBgn0030048 960.5366667 106.9333333 163.9633333 0.035917421 0.322630923 0.210412897 -5 -6 -5.5 0.2 dme-miR-263a-5p 7mer-A1 TGCCATA X 8567613 8567619 + X_8567613_8567619_+ 0.774098416 0.781020811 0.777559613 0.004894876 Trf4-1 FBtr0112964|FBtr0331725 8566937|8566937 8570159|8570159 X + 8567583 8567624 3'utr Trf4-1 FlyBase G59860.1 CGTAACTAATTCCCTATCCACCCCATTTCCTGCCATACAAAA 24 8567609 0.722021287 3 24 138 1 1.531478917 0 0.375 0.558823529 24 0 0 34 X:8567583-8567624 7 Trf4-1 FBtr0331725|FBtr0112964 8566937|8566937 8570159|8570159 TGCCATA 7mer-A1 dme-miR-263a-5p X + 8567581 8567631 3'utr Trf4-1 FlyBase G45249.1 AACGTAACTAATTCCCTATCCACCCCATTTCCTGCCATACAAAAAAAAAAA 13 8567609 0.964592749 4 13 68 1 1.255272505 0 0.307692308 0.5 13 0 0 18 X:8567581-8567631 7 17.5 3818 FBgn0030049 670.8133333 17.65 27.06666667 0.026087734 0.991501416 0.646551724 4 4 4 0.2 dme-miR-980-5p 7mer-m1 AAAAACT X 8567795 8567801 + X_8567795_8567801_+ 0.764769117 0.761593453 0.763181285 0.002245488 Trf4-1 FBtr0112964|FBtr0331725 8566937|8566937 8570159|8570159 X + 8567771 8567808 3'utr Trf4-1 FlyBase G59861.1 TGCGCAATGACCCTTGTAACTTCCAAAAACTCGTTTAA 10 8567789 0.651641957 4 10 61 1 1 0.1 0 0 10 0 0 10 X:8567771-8567808 7 Trf4-1 FBtr0331725|FBtr0112964 8566937|8566937 8570159|8570159 AAAAACT 7mer-m1 dme-miR-980-5p X + 8567777 8567804 3'utr Trf4-1 FlyBase G45250.1 ATGACCCTTGTAACTTCCAAAAACTCGT 6 8567789 0.654332315 2 6 32 1 1.041392685 0 0.833333333 0.909090909 6 0 0 11 X:8567777-8567804 7 8 3819 FBgn0030049 670.8133333 17.65 27.06666667 0.011925821 0.45325779 0.295566502 6 6 6 0.2 dme-miR-317-3p 6mer3-8 TGTGTT X 8567994 8567999 + X_8567994_8567999_+ 0.927986383 0.999685375 0.963835879 0.050698849 Trf4-1 FBtr0112964|FBtr0331725 8566937|8566937 8570159|8570159 X + 8567927 8568013 3'utr Trf4-1 FlyBase G59863.1 AATTAAGGTAAAAAAAATTGTGAGCCTACTTAAATTGTTCGAACACATTGTCCAACCCCAAAGCAATTGTGTTTTAAAGCTAAAACA 32 8567993 0.85903393 10 32 186 1 1.556302501 0.055555556 0.125 0.222222222 32 0 0 36 X:8567927-8568013 6 Trf4-1 FBtr0331725|FBtr0112964 8566937|8566937 8570159|8570159 TGTGTT 6mer3-8 dme-miR-317-3p X + 8567923 8568011 3'utr Trf4-1 FlyBase G45252.1 TTATAATTAAGGTAAAAAAAATTGTGAGCCTACTTAAATTGTTCGAACACATTGTCCAACCCCAAAGCAATTGTGTTTTAAAGCTAAAA 20 8567994 0.950491038 7 18 119 0.923076923 1.380211242 0.384615385 0.25 0.423076923 20 2 0 24 X:8567923-8568011 6 13.5 3820 FBgn0030049 670.8133333 17.65 27.06666667 0.020124824 0.764872521 0.498768473 1 0 0.5 0.2 dme-miR-263a-5p 7mer-m1 TGCCATT X 8568162 8568168 + X_8568162_8568168_+ 0.748834074 0.7500683 0.749451187 0.000872711 Trf4-1 FBtr0112964|FBtr0331725 8566937|8566937 8570159|8570159 X + 8568139 8568183 3'utr Trf4-1 FlyBase G59864.1 GTTGTGCATTTTGCATAGATTCCTGCCATTTGTTTGTATAGTTGT 137 8568158 0.835097401 4 134 1343 0.988636364 2.240549248 0.477272727 0.240875912 0.409090909 137 2 0 174 X:8568139-8568183 7 Trf4-1 FBtr0331725|FBtr0112964 8566937|8566937 8570159|8570159 TGCCATT 7mer-m1 dme-miR-263a-5p X + 8568138 8568187 3'utr Trf4-1 FlyBase G45253.1 TGTTGTGCATTTTGCATAGATTCCTGCCATTTGTTTGTATAGTTGTTCAC 83 8568158 0.830157771 4 82 791 0.992248062 2.10720997 0.457364341 0.385542169 0.604651163 83 1 0 128 X:8568138-8568187 7 109.5 3821 FBgn0030049 670.8133333 17.65 27.06666667 0.16323468 6.203966006 4.045566502 4 4 4 0.2 dme-bantam-3p 7mer-m8 TGATCTC X 8591045 8591051 - X_8591045_8591051_- 0.37769034 0.548820211 0.463255276 0.121007113 CG12659 FBtr0332627 8590773 8591302 X - 8590979 8591089 3'utr CG12659 FlyBase G65774.1 ATATATATATATATATGCATACACTGCCTAAAAGGAGATGATCTCTGTAAATTAGTTATAGAGATTTGTCACTAGTTTGACCGCAAAAATAGATTAGGTAATTCCAAGGTG 54 8591051 0.985209668 9 52 420 0.966666667 1.286306739 0.05 0.092592593 0.183333333 54 0 2 58 X:8590979-8591089 7 CG12659 FBtr0332627 8590773 8591302 TGATCTC 7mer-m8 dme-bantam-3p X - 8591024 8591095 3'utr CG12659 FlyBase G49523.1 ATTACCATATATATATATATATGCATACACTGCCTAAAAGGAGATGATCTCTGTAAATTAGTTATAGAGATT 32 8591044 0.793825522 9 30 240 0.906976744 1.591064607 0.046511628 0.15625 0.372093023 32 4 0 39 X:8591024-8591095 7 17.5 3822 FBgn0040929 86.03333333 12.17 18.70333333 0.203409531 1.437962202 0.935662092 0 -7 -3.5 0.2 dme-miR-34-5p 7mer-m8 CACTGCC X 8591062 8591068 - X_8591062_8591068_- 0.679776646 0.65891811 0.669347378 0.014749187 CG12659 FBtr0332627 8590773 8591302 X - 8590979 8591089 3'utr CG12659 FlyBase G65774.1 ATATATATATATATATGCATACACTGCCTAAAAGGAGATGATCTCTGTAAATTAGTTATAGAGATTTGTCACTAGTTTGACCGCAAAAATAGATTAGGTAATTCCAAGGTG 54 8591051 0.985209668 9 52 420 0.966666667 1.286306739 0.05 0.092592593 0.183333333 54 0 2 58 X:8590979-8591089 7 CG12659 FBtr0332627 8590773 8591302 CACTGCC 7mer-m8 dme-miR-34-5p X - 8591024 8591095 3'utr CG12659 FlyBase G49523.1 ATTACCATATATATATATATATGCATACACTGCCTAAAAGGAGATGATCTCTGTAAATTAGTTATAGAGATT 32 8591044 0.793825522 9 30 240 0.906976744 1.591064607 0.046511628 0.15625 0.372093023 32 4 0 39 X:8591024-8591095 7 13.5 3823 FBgn0040929 86.03333333 12.17 18.70333333 0.156915924 1.109285127 0.721796471 -17 -24 -20.5 0.2 dme-bantam-3p 6mer3-8 TGATCT X 8601159 8601164 + X_8601159_8601164_+ 0.989098103 0.999348436 0.99422327 0.007248057 Crag FBtr0343356|FBtr0071219|FBtr0071220 8600627|8600627|8600627 8602036|8601231|8601231 X + 8601145 8601192 3'utr Crag FlyBase G59913.1 TTTTGTAAATGACTTGATCTTAACATTTAAGTACTTAACGATTTTTCG 14 8601161 0.986132383 6 12 123 0.894736842 1.230448921 0.052631579 0.357142857 0.526315789 14 2 0 17 X:8601145-8601192 6 Crag FBtr0343356|FBtr0071219|FBtr0071220 8600627|8600627|8600627 8602036|8601231|8601231 TGATCT 6mer3-8 dme-bantam-3p X + 8601083 8601177 3'utr Crag FlyBase G45290.1 CGAACTTTCCTAAGTGAAAGCCCCAACTTGACATGTGTTGCATTGTGAAAACATGCAAATGATTTTGTAAATGACTTGATCTTAACATTTAAGTA 12 8601159 0.986541982 9 12 92 1 1.255272505 0.055555556 0.333333333 0.555555556 12 0 0 18 X:8601083-8601177 6 9 3824 FBgn0025864 2284.02 39.50333333 60.84 0.003940421 0.227828875 0.147928994 -2 0 -1 0.2 dme-miR-305-3p 6mer3-8 ATGTGC X 8601554 8601559 + X_8601554_8601559_+ 0.525801767 0.753019779 0.639410773 0.160667389 Crag FBtr0343356 8600627 8602036 X + 8601515 8601575 3'utr Crag FlyBase G59915.1 ATAATATAACGATACATATTCGTGTACATACAAAGCTATATGTGCGATCCTGTAAATCAGC 10 8601555 0.97910455 2 10 74 1 1.113943352 0.538461538 0.3 0.461538462 10 0 0 13 X:8601515-8601575 6 Crag FBtr0343356 8600627 8602036 ATGTGC 6mer3-8 dme-miR-305-3p X + 8601542 8601579 3'utr Crag FlyBase G45291.1 ATACAAAGCTATATGTGCGATCCTGTAAATCAGCATTG 8 8601555 0.960105042 3 8 50 1 0.954242509 0.333333333 0.125 0.222222222 8 0 0 9 X:8601542-8601579 6 8.5 3825 FBgn0025864 2284.02 39.50333333 60.84 0.003721509 0.215171715 0.139710717 -1 -1 -1 0.2 dme-miR-2a-2-5p 6mer3-8 TGATGA X 8602193 8602198 - X_8602193_8602198_- 0.463219093 0.490345035 0.476782064 0.019180908 Caf1-180 FBtr0071228 8602135 8602511 X - 8602168 8602223 3'utr Caf1-180 FlyBase G65777.1 ATGCAATAATACACTACCTACCTGATGATGATCTTTCATTTGATGGCGATTTTGGG 18 8602198 0.976497014 5 17 114 0.958333333 1.361727836 0 0.277777778 0.458333333 18 1 0 23 X:8602168-8602223 6 Caf1-180 FBtr0071228 8602135 8602511 TGATGA 6mer3-8 dme-miR-2a-2-5p X - 8602185 8602219 3'utr Caf1-180 FlyBase G49526.1 AATAATACACTACCTACCTGATGATGATCTTTCAT 10 8602197 0.782452257 3 10 61 1 1.113943352 0 0.3 0.461538462 10 0 0 13 X:8602185-8602219 6 12 3826 FBgn0030054 1600.7 48.52 75.10666667 0.00749672 0.247320692 0.159772768 0 -1 -0.5 0.2 dme-miR-305-5p 7mer-A1 GTACAAA X 8712521 8712527 - X_8712521_8712527_- 0.767486257 0.752658636 0.760072447 0.010484767 CG2004 FBtr0332958|FBtr0071281|FBtr0332960|FBtr0346167|FBtr0332957 8712470|8712470|8712470|8712470|8712470 8712597|8712597|8712597|8712597|8712597 X - 8712500 8712542 3'utr CG2004 FlyBase G65795.1 TGTAACCCATATAATGTACAAAACGTAACTCCAGATAATTAAA 7 8712528 0.945332781 3 7 34 1 0.954242509 0.111111111 0.142857143 0.333333333 7 0 0 9 X:8712500-8712542 7 CG2004 FBtr0332957|FBtr0332960|FBtr0346167|FBtr0332958|FBtr0071281 8712470|8712470|8712470|8712470|8712470 8712597|8712597|8712597|8712597|8712597 GTACAAA 7mer-A1 dme-miR-305-5p X - 8712512 8712539 3'utr CG2004 FlyBase G49537.1 AACCCATATAATGTACAAAACGTAACTC 5 8712528 0.657908897 2 5 20 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 X:8712512-8712539 7 6 3827 FBgn0030060 282.3166667 21.61333333 33.1 0.02125273 0.277606416 0.181268882 1 1 1 0.2 dme-miR-277-3p 7mer-m8 TGCATTT X 8873294 8873300 - X_8873294_8873300_- 0.619457837 0.61900693 0.619232383 0.000318834 Moe FBtr0331601|FBtr0071269|FBtr0308193|FBtr0071274 8873010|8873010|8873010|8873010 8873946|8873946|8873946|8873946 X - 8873257 8873322 3'utr Moe FlyBase G65821.1 TACAACAAAACAAACAACTATTTGCATTTTCCCCCGTTATAATTATTATTTTTATTATTATATAAT 85 8873301 0.984996478 6 81 669 0.971153846 2.004321374 0 0.188235294 0.336538462 85 3 0 101 X:8873257-8873322 7 Moe FBtr0308193|FBtr0071274|FBtr0331601|FBtr0071269 8873010|8873010|8873010|8873010 8873946|8873946|8873946|8873946 TGCATTT 7mer-m8 dme-miR-277-3p X - 8873276 8873315 3'utr Moe FlyBase G49552.1 AAACAAACAACTATTTGCATTTTCCCCCGTTATAATTATT 50 8873301 0.70646742 4 48 401 0.971428571 1.531478917 0 0.34 0.528571429 50 1 1 68 X:8873276-8873315 7 65.5 3828 FBgn0011661 40921.94667 1697.71 2611.596667 0.001600608 0.038581383 0.025080442 1 1 1 0.2 dme-miR-307a-3p 8mer-A1 GGTTGTGA X 8898980 8898987 - X_8898980_8898987_- 0.674669679 0.674628601 0.67464914 2.91E-05 CG1885 FBtr0333606 8898552 8899226 X - 8898956 8899006 3'utr CG1885 FlyBase G65841.1 GTAGAAAATTTCGAGCTTTGGTTGTGATTCGATTCGATTGATTAGTTATCT 58 8898988 0.708201864 8 57 580 0.986111111 1.851258349 0.277777778 0.206896552 0.361111111 58 1 0 71 X:8898956-8899006 8 CG1885 FBtr0333606 8898552 8899226 GGTTGTGA 8mer-A1 dme-miR-307a-3p X - 8898952 8899007 3'utr CG1885 FlyBase G49569.1 TGTAGAAAATTTCGAGCTTTGGTTGTGATTCGATTCGATTGATTAGTTATCTTTAT 37 8898988 0.960006183 7 35 361 0.9375 1.352182518 0.208333333 0.297297297 0.458333333 37 2 1 45 X:8898952-8899007 8 47 3829 FBgn0030066 139.3333333 11.45 17.55333333 0.337320574 4.104803493 2.677554121 1 1 1 0.2 dme-miR-965-3p 7mer-A1 ACGCTTA X 8903415 8903421 + X_8903415_8903421_+ 0.822235706 0.822267212 0.822251459 2.23E-05 Rbm13 FBtr0346163|FBtr0071255 8903356|8903356 8903761|8903464 X + 8903403 8903441 3'utr Rbm13 FlyBase G59960.1 ACTTAGCTGTTAACGCTTATTGTTTAGCCGGTTAAGAAT 14 8903422 0.655924092 5 13 135 0.944444444 1.230448921 0.333333333 0.214285714 0.388888889 14 1 0 17 X:8903403-8903441 7 Rbm13 FBtr0071255|FBtr0346163 8903356|8903356 8903464|8903761 ACGCTTA 7mer-A1 dme-miR-965-3p X + 8903403 8903439 3'utr Rbm13 FlyBase G45332.1 ACTTAGCTGTTAACGCTTATTGTTTAGCCGGTTAAGA 12 8903423 0.616219647 5 11 110 0.875 1.146128036 0.25 0.25 0.4375 12 2 0 14 X:8903403-8903439 7 12.5 3830 FBgn0030067 1128.99 111.6733333 171.8733333 0.011071843 0.111933616 0.072727978 -7 -8 -7.5 0.2 dme-miR-317-3p 8mer-A1 TGTGTTCA X 8973005 8973012 - X_8973005_8973012_- 0.611849192 0.620149967 0.615999579 0.005869552 CG10962 FBtr0071263 8972906 8973203 X - 8973000 8973034 3'utr CG10962 FlyBase G65851.1 CGTTTCGTTTTATTTTTATTATTGTGTTCAGTTAC 50 8973013 0.766576934 3 49 665 0.984615385 1.806179974 0.030769231 0.24 0.415384615 50 1 0 64 X:8973000-8973034 8 CG10962 FBtr0071263 8972906 8973203 TGTGTTCA 8mer-A1 dme-miR-317-3p X - 8973000 8973050 3'utr CG10962 FlyBase G49578.1 CTGTTGGCACTCACCTCGTTTCGTTTTATTTTTATTATTGTGTTCAGTTAC 67 8973013 0.75951168 8 64 872 0.947916667 1.180890142 0.197916667 0.343283582 0.541666667 67 0 5 91 X:8973000-8973050 8 55.5 3831 FBgn0030073 904.93 102.5533333 154.9166667 0.061330711 0.541181824 0.358257127 1 1 1 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 9085739 9085745 + X_9085739_9085745_+ 0.798990938 0.798955483 0.798973211 2.50E-05 APC4 FBtr0071285|FBtr0071285|FBtr0071285|FBtr0309872|FBtr0309872|FBtr0309872 9085700|9085700|9085700|9085700|9085700|9085700 9085867|9085867|9085867|9085867|9085867|9085867 X + 9085728 9085750 3'utr APC4 FlyBase G59975.1 ATTGATTGTTGTGTGATAACTTA 9 9085736 0.697389284 3 8 82 0.9375 0.875061263 0 0.444444444 0.6875 9 0 1 15 X:9085728-9085750 7 APC4 FBtr0071285|FBtr0071285|FBtr0071285|FBtr0309872|FBtr0309872|FBtr0309872 9085700|9085700|9085700|9085700|9085700|9085700 9085867|9085867|9085867|9085867|9085867|9085867 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X + 9085727 9085751 3'utr APC4 FlyBase G45344.1 TATTGATTGTTGTGTGATAACTTAA 9 9085737 0.660400306 4 9 81 1 1.176091259 0 0.555555556 0.733333333 9 0 0 15 X:9085727-9085751 7 9 3832 FBgn0052707 194.3333333 9.046666667 13.88 0.046312178 0.994841562 0.648414986 3 2 2.5 0.2 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA X 9088039 9088045 + X_9088039_9088045_+ 0.771454344 0.818642944 0.795048644 0.033367379 CG32706 FBtr0071287 9088008 9088073 X + 9088023 9088049 3'utr CG32706 FlyBase G59979.1 CTTTGCTTCCAATGTCTACCTGACTGC 5 9088036 0.707473925 2 2 28 0.666666667 0.602059991 0.166666667 0.2 0.333333333 5 2 0 4 X:9088023-9088049 7 CG32706 FBtr0071287 9088008 9088073 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" X + 9088018 9088051 3'utr CG32706 FlyBase G45348.1 TAGACCTTTGCTTCCAATGTCTACCTGACTGCAA 5 9088037 0.931568935 3 5 35 1 0.698970004 0.2 0 0 5 0 0 5 X:9088018-9088051 7 4.5 3833 FBgn0052706 14.77333333 2.05 3.03 0.304602888 2.195121951 1.485148515 3 2 2.5 0.2 dme-miR-980-3p 8mer-A1 GGCAGCTA X 9093750 9093757 - X_9093750_9093757_- 0.665377517 0.666242059 0.665809788 0.000611365 CG7766 FBtr0114594|FBtr0309250|FBtr0343319|FBtr0071351|FBtr0071352|FBtr0114595|FBtr0309251 9093610|9093610|9093610|9093610|9093610|9093610|9093610 9094242|9094242|9094242|9094242|9094242|9094242|9094242 X - 9093721 9093895 3'utr CG7766 FlyBase G65868.1 TGTACGTATGTGTTGAGACCTTGGAAAGATACTCCAAAACTGCACCCAAAAAACCGATCCTAACCCCGCCACACCACCCAGCCAATCCATTTAGTAAGCCAACCCATGCTGCTCGGATACAGATTTGTTTTTTGTACTGGCAGCTATTTTACAGCGACAACACTTTCGATTGTTT 47 9093758 0.987847864 16 45 396 0.961538462 1.698970004 0.153846154 0.106382979 0.192307692 47 2 0 50 X:9093721-9093895 8 CG7766 FBtr0114595|FBtr0309251|FBtr0071351|FBtr0071352|FBtr0309250|FBtr0343319|FBtr0114594 9093610|9093610|9093610|9093610|9093610|9093610|9093610 9094242|9094242|9094242|9094242|9094242|9094242|9094242 GGCAGCTA 8mer-A1 dme-miR-980-3p X - 9093715 9093775 3'utr CG7766 FlyBase G49592.1 AGATTTGTTTTTTGTACTGGCAGCTATTTTACAGCGACAACACTTTCGATTGTTTTAACTT 26 9093758 0.880291063 5 25 244 0.945945946 1.544068044 0.054054054 0.307692308 0.513513514 26 2 0 35 X:9093715-9093775 8 29 3834 FBgn0030087 549.9233333 13.47666667 20.56666667 0.052734624 2.151867425 1.410048622 1 1 1 0.2 dme-miR-1003-3p 7mer-A1 TGTGAGA X 9108152 9108158 + X_9108152_9108158_+ 0.357352263 0.282158722 0.319755492 0.053169904 Arfrp1 FBtr0071293 9107931 9108354 X + 9108141 9108167 3'utr Arfrp1 FlyBase G59997.1 TGTTAGAAAGCTGTGAGACTTCTGCAT 6 9108154 0.75587212 2 6 31 1 1 0.3 0.333333333 0.6 6 0 0 10 X:9108141-9108167 7 Arfrp1 FBtr0071293 9107931 9108354 TGTGAGA 7mer-A1 dme-miR-1003-3p X + 9108103 9108166 3'utr Arfrp1 FlyBase G45368.1 TTTTCGGTTAACTACTGCTGAGAAAATGAGGAAAACAATGTTAGAAAGCTGTGAGACTTCTGCA 6 9108154 0.949285294 3 6 29 1 0.903089987 0 0.166666667 0.375 6 0 0 8 X:9108103-9108166 7 5 3835 FBgn0030088 100.3333333 11.22666667 17.08666667 0.049833887 0.445368171 0.292625829 -2 -2 -2 0.2 dme-miR-184-3p 6mer2-7 CCGTCC X 9117048 9117053 + X_9117048_9117053_+ 0.987304108 0.752033522 0.869668815 0.166361437 AP-1gamma FBtr0071298|FBtr0071294|FBtr0112965|FBtr0333808|FBtr0309254|FBtr0071296|FBtr0071297|FBtr0071295|FBtr0309255 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117739|9117739|9117739|9117741|9117741|9117739|9117739|9117739|9117744 X + 9117032 9117087 5'utr AP-1gamma FlyBase G60015.1 TAATTGTTTTTTTGTCCCGTCCTGAGACTCTTTGATCGGTTCCCGGCTTCTGTGGG 29 9117054 0.834023407 9 27 246 0.916666667 1.51851394 0.388888889 0.172413793 0.333333333 29 3 0 33 X:9117032-9117087 6 AP-1gamma FBtr0333808|FBtr0112965|FBtr0071294|FBtr0071298|FBtr0071295|FBtr0309255|FBtr0071297|FBtr0071296|FBtr0309254 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117741|9117739|9117739|9117739|9117739|9117744|9117739|9117739|9117741 CCGTCC 6mer2-7 dme-miR-184-3p X + 9117033 9117106 5'utr AP-1gamma FlyBase G45380.1 AATTGTTTTTTTGTCCCGTCCTGAGACTCTTTGATCGGTTCCCGGCTTCTGTGGGCCAGCCCCTGATATTCCTT 24 9117054 0.986595538 7 23 199 0.967741935 1.477121255 0.193548387 0.25 0.419354839 24 1 0 30 X:9117033-9117106 6 22 3836 FBgn0030089 1732.843333 43.93 67.95333333 0.012695897 0.500796722 0.323751594 -6 -6 -6 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA X 9117249 9117256 + X_9117249_9117256_+ 0.480648573 0.446548189 0.463598381 0.024112624 AP-1gamma FBtr0071298|FBtr0071294|FBtr0112965|FBtr0333808|FBtr0309254|FBtr0071296|FBtr0071297|FBtr0071295|FBtr0309255 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117739|9117739|9117739|9117741|9117741|9117739|9117739|9117739|9117744 X + 9117221 9117286 5'utr AP-1gamma FlyBase G60016.1 ATGATGTATTGTTATTTCCTGTGCGCACGTACTTAAAGCGGAAAATCAGCAGCAACCAGAGAAAGT 53 9117236 0.993922077 10 35 449 0.661016949 1.113943352 0.322033898 0.094339623 0.186440678 53 18 2 39 X:9117221-9117286 8 AP-1gamma FBtr0333808|FBtr0112965|FBtr0071294|FBtr0071298|FBtr0071295|FBtr0309255|FBtr0071297|FBtr0071296|FBtr0309254 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117741|9117739|9117739|9117739|9117739|9117744|9117739|9117739|9117741 GTACTTAA 8mer-A1 dme-miR-252-5p X + 9117223 9117269 5'utr AP-1gamma FlyBase G45381.1 GATGTATTGTTATTTCCTGTGCGCACGTACTTAAAGCGGAAAATCAG 40 9117236 0.860504341 8 26 322 0.656716418 1.342422681 0.447761194 0.45 0.671641791 40 22 1 44 X:9117223-9117269 8 45.5 3837 FBgn0030089 1732.843333 43.93 67.95333333 0.026257423 1.035738675 0.669577161 13 13 13 0.2 dme-miR-2a-2-5p 8mer-A1 TGATGAGA X 9117456 9117463 + X_9117456_9117463_+ 0.60032874 0.599462793 0.599895766 0.000612284 AP-1gamma FBtr0071298|FBtr0071294|FBtr0112965|FBtr0333808|FBtr0309254|FBtr0071296|FBtr0071297|FBtr0071295|FBtr0309255 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117739|9117739|9117739|9117741|9117741|9117739|9117739|9117739|9117744 X + 9117418 9117507 5'utr AP-1gamma FlyBase G60018.1 TTAGTTGCCGTCGCCGAGATGAGATGAGATGATGATGATGATGAGACGATGGATATGGAAATGACGATGATGATGATGGGGGGCATCGAG 17 9117467 0.861172467 8 15 74 0.833333333 1.176091259 0.5 0.058823529 0.111111111 17 3 0 15 X:9117418-9117507 8 AP-1gamma FBtr0333808|FBtr0112965|FBtr0071294|FBtr0071298|FBtr0071295|FBtr0309255|FBtr0071297|FBtr0071296|FBtr0309254 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117741|9117739|9117739|9117739|9117739|9117744|9117739|9117739|9117741 TGATGAGA 8mer-A1 dme-miR-2a-2-5p X + 9117388 9117486 5'utr AP-1gamma FlyBase G45382.1 GGACGCAGCTTAGAACTATATATTAACTGATTAGTTGCCGTCGCCGAGATGAGATGAGATGATGATGATGATGAGACGATGGATATGGAAATGACGATG 12 9117459 0.965962931 6 11 63 1 1.255272505 0.555555556 0.333333333 0.555555556 12 0 0 18 X:9117388-9117486 8 8 3838 FBgn0030089 1732.843333 43.93 67.95333333 0.00461669 0.182107899 0.117727852 -11 -3 -7 0.2 dme-miR-980-3p 6mer2-7 GCAGCT X 9117570 9117575 + X_9117570_9117575_+ 0.979104411 0.965038512 0.972071461 0.009946093 AP-1gamma FBtr0071298|FBtr0071294|FBtr0112965|FBtr0333808|FBtr0309254|FBtr0071296|FBtr0071297|FBtr0071295|FBtr0309255 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117739|9117739|9117739|9117741|9117741|9117739|9117739|9117739|9117744 X + 9117547 9117627 5'utr AP-1gamma FlyBase G60019.1 TATTACGATTATAAATGAATTGCGCAGCTGTATGAGAAGGAAAGAGAGGGAGAGAGATAAGAAAATAATAACATTAACATA 78 9117567 0.91955567 9 71 297 0.925531915 1.337459261 0.319148936 0.153846154 0.29787234 78 4 3 87 X:9117547-9117627 6 AP-1gamma FBtr0333808|FBtr0112965|FBtr0071294|FBtr0071298|FBtr0071295|FBtr0309255|FBtr0071297|FBtr0071296|FBtr0309254 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117741|9117739|9117739|9117739|9117739|9117744|9117739|9117739|9117741 GCAGCT 6mer2-7 dme-miR-980-3p X + 9117553 9117628 5'utr AP-1gamma FlyBase G45383.1 GATTATAAATGAATTGCGCAGCTGTATGAGAAGGAAAGAGAGGGAGAGAGATAAGAAAATAATAACATTAACATAT 48 9117567 0.884982527 8 45 167 0.931506849 1.832508913 0.328767123 0.416666667 0.616438356 48 5 0 68 X:9117553-9117628 6 32 3839 FBgn0030089 1732.843333 43.93 67.95333333 0.018466759 0.728431596 0.47091141 3 3 3 0.2 dme-miR-1008-3p 6mer3-8 AGCTGT X 9151749 9151754 + X_9151749_9151754_+ 0.988059708 0.999963435 0.994011571 0.008417187 dalao FBtr0071300 9151671 9151976 X + 9151718 9151802 3'utr dalao FlyBase G60039.1 ATATATGAATCGATCCCTGGTGTTGTAACATAGCTGTCCCCTCCCGGAACTTCCGGAAGGCAAACAACCGGAATGCTCTTAACTT 26 9151748 0.946513453 9 23 153 0.85 1.531478917 0.1 0.384615385 0.6 26 6 0 34 X:9151718-9151802 6 dalao FBtr0071300 9151671 9151976 AGCTGT 6mer3-8 dme-miR-1008-3p X + 9151723 9151768 3'utr dalao FlyBase G45394.1 TGAATCGATCCCTGGTGTTGTAACATAGCTGTCCCCTCCCGGAACT 5 9151740 0.984429879 4 4 29 0.5 0.602059991 0.125 0.2 0.5 5 4 0 4 X:9151723-9151768 6 9 3840 FBgn0030093 788.6633333 35.47 53.86 0.011411713 0.253735551 0.167099889 1 9 5 0.2 dme-miR-277-3p 7mer-m8 TGCATTT X 9153073 9153079 - X_9153073_9153079_- 0.619976611 0.620011646 0.619994129 2.47E-05 His3.3B FBtr0340343 9152521 9154111 X - 9152946 9153138 3'utr His3.3B FlyBase G65891.1 ACATAACGAAGGGATGGGCGTGACAGAGTTAGTTGATTAAATAAGATTTTAGATTTACATGCATTTTATACGTTTAGGCGGACGATAGAAGATGATTCTTCTTCGGGAGATGAAAAAAAGATATAAAGATGATTCAGCAATCAGATTAACTTACACATCTATAGATTTGGAAGAGCATCGAATAAAAATAACC 172 9153073 0.848434979 32 152 1447 0.905472637 1.658011397 0.164179104 0.156976744 0.278606965 172 16 3 182 X:9152946-9153138 7 His3.3B FBtr0340343 9152521 9154111 TGCATTT 7mer-m8 dme-miR-277-3p X - 9152949 9153134 3'utr His3.3B FlyBase G49612.1 AACGAAGGGATGGGCGTGACAGAGTTAGTTGATTAAATAAGATTTTAGATTTACATGCATTTTATACGTTTAGGCGGACGATAGAAGATGATTCTTCTTCGGGAGATGAAAAAAAGATATAAAGATGATTCAGCAATCAGATTAACTTACACATCTATAGATTTGGAAGAGCATCGAATAAAAATA 117 9153073 0.803406756 34 98 925 0.847058824 1.857332496 0.147058824 0.367521368 0.564705882 117 25 1 144 X:9152949-9153134 7 92.5 3841 FBgn0004828 21818.69667 1276.286667 1948.03 0.004239483 0.072475881 0.047483868 -6 -6 -6 0.2 dme-bantam-3p 7mer-m8 TGATCTC X 9171625 9171631 + X_9171625_9171631_+ 0.661319317 0.660819491 0.661069404 0.000353412 mei-P26 FBtr0333474|FBtr0333473|FBtr0333475 9170814|9170814|9170814 9189309|9189309|9175190 X + 9171581 9171657 3'utr mei-P26 FlyBase G60057.1 AAACCAATAACAGATGATAAACAAAATGCAACAAATACTATTTTTGATCTCTAATTTAAAAACAATTAGCGCTACTA 115 9171624 0.99202655 14 111 1231 0.965034965 1.838849091 0 0.2 0.356643357 115 4 1 138 X:9171581-9171657 7 mei-P26 FBtr0071303|FBtr0340341|FBtr0333475|FBtr0333473|FBtr0333474 9170814|9170814|9170814|9170814|9170814 9171659|9171659|9175190|9189309|9189309 TGATCTC 7mer-m8 dme-bantam-3p X + 9171604 9171643 3'utr mei-P26 FlyBase G45407.1 AAATGCAACAAATACTATTTTTGATCTCTAATTTAAAAAC 79 9171623 0.618583064 11 76 862 0.963636364 2.025305865 0 0.316455696 0.509090909 79 4 0 106 X:9171604-9171643 7 95 3842 FBgn0026206 3669.783333 46.77 72.34333333 0.025887087 2.031216592 1.313182509 1 2 1.5 0.2 dme-miR-79-3p 7mer-m8 TAGCTTT X 9171969 9171975 + X_9171969_9171975_+ 0.452202495 0.429392782 0.440797638 0.016128894 mei-P26 FBtr0333474|FBtr0333473|FBtr0333475 9170814|9170814|9170814 9189309|9189309|9175190 X + 9171948 9171998 3'utr mei-P26 FlyBase G60058.2 TATATTGTTATATCGACCGATTAGCTTTTTTGTGCATACCCTTCCAGAATC 136 9171968 0.896928082 6 135 1345 1 2.227886705 0.337278107 0.213235294 0.366863905 136 0 0 169 X:9171948-9171998 7 mei-P26 FBtr0333475|FBtr0333473|FBtr0333474 9170814|9170814|9170814 9175190|9189309|9189309 TAGCTTT 7mer-m8 dme-miR-79-3p X + 9171921 9171991 3'utr mei-P26 FlyBase G45408.1 ATGTTACTTATTATCTATATAGACATATATATTGTTATATCGACCGATTAGCTTTTTTGTGCATACCCTTC 102 9171968 0.989417039 5 102 990 1 2.176091259 0.433333333 0.37254902 0.573333333 102 0 0 150 X:9171921-9171991 7 115.5 3843 FBgn0026206 3669.783333 46.77 72.34333333 0.031473248 2.469531751 1.596553472 1 1 1 0.2 dme-miR-965-3p 6mer3-8 TACGCT X 9172294 9172299 + X_9172294_9172299_+ 0.668972898 0.982562159 0.825767529 0.221741121 mei-P26 FBtr0333474|FBtr0333473|FBtr0333475 9170814|9170814|9170814 9189309|9189309|9175190 X + 9172261 9172338 3'utr mei-P26 FlyBase G60060.1 CAGAAAATAACAAAAACTGTTTAGGTTTTTCCTTACGCTGCTTATATAAGGTGATATCTATTTATATATAAATCTATA 28 9172307 0.989789074 10 28 276 1 1.491361694 0.064516129 0.071428571 0.161290323 28 0 0 31 X:9172261-9172338 6 mei-P26 FBtr0333475|FBtr0333473|FBtr0333474 9170814|9170814|9170814 9175190|9189309|9189309 TACGCT 6mer3-8 dme-miR-965-3p X + 9172282 9172328 3'utr mei-P26 FlyBase G45409.1 TAGGTTTTTCCTTACGCTGCTTATATAAGGTGATATCTATTTATATA 13 9172294 0.789784295 6 12 129 0.95 1.278753601 0 0.307692308 0.55 13 1 0 19 X:9172282-9172328 6 14 3844 FBgn0026206 3669.783333 46.77 72.34333333 0.003814939 0.299337182 0.193521633 -13 0 -6.5 0.2 dme-miR-263a-5p 7mer-A1 TGCCATA X 9172415 9172421 + X_9172415_9172421_+ 0.782887474 0.782599661 0.782743567 0.000203505 mei-P26 FBtr0333474|FBtr0333473|FBtr0333475 9170814|9170814|9170814 9189309|9189309|9175190 X + 9172382 9172434 3'utr mei-P26 FlyBase G60061.1 ACATATATGTGAAATCCTATGACTATATGACTTTGCCATATAATATACAAAGC 12 9172413 0.992123385 6 8 96 0.714285714 1 0.071428571 0.083333333 0.214285714 12 4 0 10 X:9172382-9172434 7 mei-P26 FBtr0333475|FBtr0333473|FBtr0333474 9170814|9170814|9170814 9175190|9189309|9189309 TGCCATA 7mer-A1 dme-miR-263a-5p X + 9172371 9172430 3'utr mei-P26 FlyBase G45410.1 ATATATCTTAAACATATATGTGAAATCCTATGACTATATGACTTTGCCATATAATATACA 12 9172414 0.986068155 8 10 88 0.8125 0.812913357 0.125 0.333333333 0.5 12 2 1 13 X:9172371-9172430 7 7.5 3845 FBgn0026206 3669.783333 46.77 72.34333333 0.002043717 0.160359205 0.103672303 2 1 1.5 0.2 dme-miR-282-5p 7mer-A1 GAGGCTA X 9173864 9173870 + X_9173864_9173870_+ 0.819865372 0.819367408 0.81961639 0.000352139 mei-P26 FBtr0333474|FBtr0333473|FBtr0333475 9170814|9170814|9170814 9189309|9189309|9175190 X + 9173778 9173877 3'utr mei-P26 FlyBase G60070.1 ACCATCATTTACTATTGTCATTATTATTAATTATTATTAATTATTATTATTATTATTATTGTTTAGTTTTTACGTTGTTACATTGTGAGGCTACACACAA 29 9173863 0.985569042 9 28 256 0.96875 1.190331698 0.0625 0.103448276 0.1875 29 0 1 31 X:9173778-9173877 7 mei-P26 FBtr0333475|FBtr0333473|FBtr0333474 9170814|9170814|9170814 9175190|9189309|9189309 GAGGCTA 7mer-A1 dme-miR-282-5p X + 9173834 9173882 3'utr mei-P26 FlyBase G45419.1 TATTGTTTAGTTTTTACGTTGTTACATTGTGAGGCTACACACAATTCTG 23 9173862 0.979367917 4 23 170 1 1.579783597 0.105263158 0.434782609 0.657894737 23 0 0 38 X:9173834-9173882 7 20.5 3846 FBgn0026206 3669.783333 46.77 72.34333333 0.005586161 0.438315159 0.283370963 1 2 1.5 0.2 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 9176121 9176127 + X_9176121_9176127_+ 0.798532308 0.657950749 0.728241528 0.099406203 mei-P26 FBtr0333474|FBtr0333473 9170814|9170814 9189309|9189309 X + 9176086 9176139 3'utr mei-P26 FlyBase G60078.1 GCGAATGAAGGACGAACCTTTTGATAAAGATGCTGCCAAAGATTTTTTATACAA 12 9176118 0.976855653 5 12 77 1 1.204119983 0.0625 0.25 0.4375 12 0 0 16 X:9176086-9176139 7 mei-P26 FBtr0333473|FBtr0333474 9170814|9170814 9189309|9189309 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X + 9176091 9176140 3'utr mei-P26 FlyBase G45428.1 TGAAGGACGAACCTTTTGATAAAGATGCTGCCAAAGATTTTTTATACAAT 11 9176119 0.986456592 2 9 86 0.846153846 1.041392685 0 0.181818182 0.307692308 11 2 0 11 X:9176091-9176140 7 11 3847 FBgn0026206 3669.783333 46.77 72.34333333 0.002997452 0.2351935 0.152052712 3 2 2.5 0.2 dme-miR-999-3p 6mer2-7 GTTAAC X 9194832 9194837 - X_9194832_9194837_- 0.758275337 0.86686946 0.812572398 0.076787695 CG12118 FBtr0071340|FBtr0071339 9194748|9194748 9194918|9194918 X - 9194781 9194901 3'utr CG12118 FlyBase G65906.1 GTGGTTGCCATTGGAGTTGGACTCCAAATGATGAAGCCGTAGCCTTTTAAGCGATGATGACTGTGTTAACTGTTTAGGTTTCCTGTTCCGACACTGTATATAGCCGACAATGCTGGTGTTA 169 9194844 0.987365231 16 161 1415 0.95215311 1.997823081 0.119617225 0.189349112 0.344497608 169 9 1 199 X:9194781-9194901 6 CG12118 FBtr0071339|FBtr0071340 9194748|9194748 9194918|9194918 GTTAAC 6mer2-7 dme-miR-999-3p X - 9194821 9194862 3'utr CG12118 FlyBase G49627.2 TAGCCTTTTAAGCGATGATGACTGTGTTAACTGTTTAGGTTT 137 9194844 0.693953326 7 129 997 0.961206897 2.348304863 0.099137931 0.437956204 0.668103448 137 9 0 223 X:9194821-9194862 6 142 3848 FBgn0030101 135.7533333 13.14666667 20.01666667 1.046014831 10.80121704 7.09408826 7 7 7 0.2 dme-miR-965-3p 6mer2-7 ACGCTT X 9228908 9228913 - X_9228908_9228913_- 0.993083946 0.978655493 0.98586972 0.010202419 CG12121 FBtr0071334 9228794 9229267 X - 9228831 9228935 3'utr CG12121 FlyBase G65936.1 AATCCGCTTAACGGAATACTGAACGCTTGTGACACCCAGGCCCTATCCTTGGTTTAAGATATACATATACATATAAATAAATACACTTATGTAATTACCTATAAT 21 9228907 0.964455243 8 21 117 1 1.342422681 0.272727273 0.047619048 0.090909091 21 0 0 22 X:9228831-9228935 6 CG12121 FBtr0071334 9228794 9229267 ACGCTT 6mer2-7 dme-miR-965-3p X - 9228844 9228939 3'utr CG12121 FlyBase G49658.1 AATGAATCCGCTTAACGGAATACTGAACGCTTGTGACACCCAGGCCCTATCCTTGGTTTAAGATATACATATACATATAAATAAATACACTTATGT 17 9228908 0.975830396 5 15 96 0.875 1.021189299 0 0.294117647 0.5 17 2 1 21 X:9228844-9228939 6 14.5 3849 FBgn0030109 1482.023333 60.82 93.35 0.009783922 0.238408418 0.155329405 -6 -5 -5.5 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 923037 923043 - X_923037_923043_- 0.598621234 0.562920776 0.580771005 0.025243995 CG3711 FBtr0343361|FBtr0343361|FBtr0343361 922887|922887|922887 924213|924213|924213 X - 922984 923061 5'utr CG3711 FlyBase G63924.1 AATTCTTGTTTCCGAAATTGTGATAAATCAGTTTATTTATGATTGCATTGTGACTATGTTTAAGCAATATTTAAGAAT 37 923044 0.987956581 7 35 319 0.933333333 1.146128036 0.244444444 0.189189189 0.333333333 37 1 2 42 X:922984-923061 7 CG3711 FBtr0343361|FBtr0343361|FBtr0343361 922887|922887|922887 924213|924213|924213 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 923031 923059 5'utr CG3711 FlyBase G48188.1 TTCTTGTTTCCGAAATTGTGATAAATCAG 20 923044 0.814829715 2 20 159 1 1.505149978 0.375 0.4 0.625 20 0 0 32 X:923031-923059 7 26 3850 FBgn0040344 266.6666667 7.813333333 11.92 0.0975 3.327645051 2.181208054 1 1 1 0.2 dme-miR-988-3p 6mer2-7 CAAGGG X 923359 923364 - X_923359_923364_- 0.781247917 0.928767507 0.855007712 0.10431211 CG3711 FBtr0331303|FBtr0343361 923166|922887 924144|924213 X - 923319 923372 5'utr CG3711 FlyBase G63927.1 TTATTTTGCAAGGGTCATAGGCTTATAGTCTCCGAAGTCCGAGGGTCTTCCCTT 11 923355 0.854067926 4 11 92 1 1.041392685 0.090909091 0 0 11 0 0 11 X:923319-923372 6 CG3711 FBtr0331303|FBtr0343361 923166|922887 924144|924213 CAAGGG 6mer2-7 dme-miR-988-3p X - 923343 923372 5'utr CG3711 FlyBase G48191.1 TTATTTTGCAAGGGTCATAGGCTTATAGTC 7 923356 0.838362812 3 7 55 1 1.113943352 0 0.428571429 0.692307692 7 0 0 13 X:923343-923372 6 7 3851 FBgn0040344 266.6666667 7.813333333 11.92 0.02625 0.895904437 0.587248322 -9 -8 -8.5 0.2 dme-bantam-3p 6mer3-8 TGATCT X 923743 923748 - X_923743_923748_- 0.70338666 0.996274941 0.8498308 0.207103232 CG3711 FBtr0331303|FBtr0343361 923166|922887 924144|924213 X - 923726 923769 5'utr CG3711 FlyBase G63928.2 TATAGGTTTTGTTAAAACACTTGATCTTTAAACCTTATAGTTGC 41 923748 0.832309161 6 38 343 0.9375 1.352182518 0.0625 0.12195122 0.25 41 2 1 45 X:923726-923769 6 CG3711 FBtr0331303|FBtr0343361 923166|922887 924144|924213 TGATCT 6mer3-8 dme-bantam-3p X - 923724 923757 5'utr CG3711 FlyBase G48192.1 TAAAACACTTGATCTTTAAACCTTATAGTTGCAG 16 923748 0.767529471 4 14 134 0.869565217 1 0.173913043 0.3125 0.52173913 16 2 1 20 X:923724-923757 6 27.5 3852 FBgn0040344 266.6666667 7.813333333 11.92 0.103125 3.519624573 2.30704698 0 0 0 0.2 dme-miR-980-5p 6mer2-7 AAAAAC X 9246098 9246103 - X_9246098_9246103_- 0.990180329 0.999992285 0.995086307 0.006938132 amx FBtr0307281|FBtr0071331 9245913|9245913 9246206|9246206 X - 9246040 9246134 3'utr amx FlyBase G65962.1 ATGCAACCATTAGGAATAGCAAGATCTTCTCAAAAACGTGTACATAATTAATTAGGAAATGTATTTTATTAATAATGCCAAAAGTTCTTTTTTGT 30 9246105 0.882177299 9 29 193 0.970588235 1.51851394 0 0.133333333 0.235294118 30 1 0 33 X:9246040-9246134 6 amx FBtr0307281|FBtr0071331 9245913|9245913 9246206|9246206 AAAAAC 6mer2-7 dme-miR-980-5p X - 9246047 9246133 3'utr amx FlyBase G49675.1 TGCAACCATTAGGAATAGCAAGATCTTCTCAAAAACGTGTACATAATTAATTAGGAAATGTATTTTATTAATAATGCCAAAAGTTCT 14 9246106 0.969540756 6 14 83 1 1.278753601 0.105263158 0.214285714 0.421052632 14 0 0 19 X:9246047-9246133 6 15 3853 FBgn0000077 117.3333333 12.09666667 18.64666667 0.127840909 1.240011022 0.804433321 2 3 2.5 0.2 dme-miR-317-3p 7mer-m8 TGTGTTC X 9254901 9254907 + X_9254901_9254907_+ 0.598862544 0.661610522 0.630236533 0.044369536 CG17754 FBtr0071315|FBtr0340122 9254354|9254354 9255031|9255802 X + 9254865 9255018 5'utr-coding CG17754 FlyBase G60111.1 AACTGCAGCTCACCTTCGCCTCGCCTCGCTCTCGTCTGTGTTCTGACATGATTCCCTGTGGTATGGCATACACCCAGAACTCACCCACTTTCCGCACCGCACACCCCAACCCAGTATTTTCCCCATAACTCTGCTCTTTTCGGCTTGAATCTAA 27 9254899 0.905039927 13 25 176 0.9375 1.477121255 0 0.185185185 0.3125 27 2 0 30 X:9254865-9255018 7 CG17754 FBtr0071315 9254354 9255031 TGTGTTC 7mer-m8 dme-miR-317-3p X + 9254866 9254933 5'utr-coding CG17754 FlyBase G45445.1 ACTGCAGCTCACCTTCGCCTCGCCTCGCTCTCGTCTGTGTTCTGACATGATTCCCTGTGGTATGGCAT 7 9254900 0.984101072 5 7 55 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 X:9254866-9254933 7 6 3854 FBgn0030114 175.6666667 7.656666667 11.80666667 0.034155598 0.783630823 0.508187465 2 1 1.5 0.2 dme-miR-317-3p 8mer-A1 TGTGTTCA X 9258195 9258202 + X_9258195_9258202_+ 0.61942743 0.619553822 0.619490626 8.94E-05 ric8a FBtr0346166|FBtr0071317 9258082|9258082 9259202|9258670 X + 9258082 9258213 stop_codon ric8a FlyBase G60123.1 AAGCCACAAATGTATTGCGGGATCTGCTATGGCACAACTTCCAAATAGCTACCAAAAAATCACCTTAAACTCTGCATTTATTCCATAAGTTTACTGTCGAATGTAGCTTCGAATGTGTTCAAAAAGCAGATT 33 9258195 0.927909585 12 29 191 0.891891892 1.217483944 0.189189189 0.090909091 0.189189189 33 3 1 33 X:9258082-9258213 8 ric8a FBtr0071317|FBtr0346166 9258082|9258082 9258670|9259202 TGTGTTCA 8mer-A1 dme-miR-317-3p X + 9258175 9258208 3'utr ric8a FlyBase G45456.1 CTGTCGAATGTAGCTTCGAATGTGTTCAAAAAGC 10 9258195 0.676957862 4 10 66 1 1.113943352 0.153846154 0.2 0.384615385 10 0 0 13 X:9258175-9258208 8 13 3855 FBgn0028292 451.68 19.07666667 29.28333333 0.028781438 0.681460772 0.443938532 0 0 0 0.2 dme-miR-986-5p 8mer-A1 ATTCGAGA X 9258250 9258257 + X_9258250_9258257_+ 0.635053142 0.613071519 0.62406233 0.015543338 ric8a FBtr0346166|FBtr0071317 9258082|9258082 9259202|9258670 X + 9258236 9258276 3'utr ric8a FlyBase G60124.1 ATTTTATACCACATATTCGAGAACATCTCATTATAACCTAC 11 9258266 0.744928111 4 9 64 0.8125 1.113943352 0 0.454545455 0.625 11 3 0 13 X:9258236-9258276 8 ric8a FBtr0071317|FBtr0346166 9258082|9258082 9258670|9259202 ATTCGAGA 8mer-A1 dme-miR-986-5p X + 9258241 9258275 3'utr ric8a FlyBase G45457.1 ATACCACATATTCGAGAACATCTCATTATAACCTA 9 9258266 0.632791542 3 9 50 1 1.041392685 0 0.222222222 0.363636364 9 0 0 11 X:9258241-9258275 8 10 3856 FBgn0028292 451.68 19.07666667 29.28333333 0.022139568 0.524200594 0.341491178 -16 -16 -16 0.2 dme-miR-252-5p 7mer-m8 GTACTTA X 9258459 9258465 + X_9258459_9258465_+ 0.587985557 0.587633887 0.587809722 0.000248689 ric8a FBtr0346166|FBtr0071317 9258082|9258082 9259202|9258670 X + 9258436 9258479 3'utr ric8a FlyBase G60126.1 AACCATTAACCATGTAGAACGTTGTACTTATTAAGTTATTACGC 12 9258458 0.97863072 3 12 125 1 1.113943352 0 0.083333333 0.153846154 12 0 0 13 X:9258436-9258479 7 ric8a FBtr0071317|FBtr0346166 9258082|9258082 9258670|9259202 GTACTTA 7mer-m8 dme-miR-252-5p X + 9258441 9258475 3'utr ric8a FlyBase G45459.1 TTAACCATGTAGAACGTTGTACTTATTAAGTTATT 7 9258458 0.80285385 3 7 70 1 1 0 0.285714286 0.5 7 0 0 10 X:9258441-9258475 7 9.5 3857 FBgn0028292 451.68 19.07666667 29.28333333 0.021032589 0.497990564 0.324416619 1 1 1 0.2 dme-miR-317-3p 8mer-A1 TGTGTTCA X 9259075 9259082 + X_9259075_9259082_+ 0.59909397 0.607495092 0.603294531 0.005940475 ric8a FBtr0346166 9258082 9259202 X + 9259045 9259101 3'utr ric8a FlyBase G60127.1 ATATACAAGAAATCCTATCTAGAGCTTTATTGTGTTCAATTTGCTATAGCGATGATA 41 9259074 0.99074126 2 41 449 1 1.716003344 0.461538462 0.195121951 0.365384615 41 0 0 52 X:9259045-9259101 8 ric8a FBtr0346166 9258082 9259202 TGTGTTCA 8mer-A1 dme-miR-317-3p X + 9259058 9259101 3'utr ric8a FlyBase G45460.1 CCTATCTAGAGCTTTATTGTGTTCAATTTGCTATAGCGATGATA 23 9259074 0.76109212 2 22 258 0.941176471 1.028028724 0.411764706 0.347826087 0.558823529 23 0 2 32 X:9259058-9259101 8 32 3858 FBgn0028292 451.68 19.07666667 29.28333333 0.070846617 1.677441901 1.09277177 1 1 1 0.2 dme-miR-34-5p 7mer-A1 ACTGCCA X 9358432 9358438 + X_9358432_9358438_+ 0.821834291 0.821226783 0.821530537 0.000429567 BCL7-like FBtr0071358 9357680 9358594 X + 9358376 9358454 3'utr BCL7-like FlyBase G60146.1 AACCAGTAAACCTCTTTATAGTACACTTACCAACATAAATGTGACATTAACATTTAACTGCCAGCAGGGCGCGAAAAAT 27 9358429 0.701607745 7 24 148 0.939393939 1.190331698 0.272727273 0.148148148 0.303030303 27 1 1 31 X:9358376-9358454 7 BCL7-like FBtr0071358 9357680 9358594 ACTGCCA 7mer-A1 dme-miR-34-5p X + 9358380 9358474 3'utr BCL7-like FlyBase G45474.1 AGTAAACCTCTTTATAGTACACTTACCAACATAAATGTGACATTAACATTTAACTGCCAGCAGGGCGCGAAAAATATGCAAATGTTCGCTGAAGA 15 9358429 0.969032796 6 14 84 1 1.431363764 0.444444444 0.466666667 0.703703704 15 0 0 27 X:9358380-9358474 7 15.5 3859 FBgn0026149 221.2233333 16.18333333 24.75 0.070064942 0.957775489 0.626262626 3 3 3 0.2 dme-miR-92b-3p 6mer3-8 GTGCAA X 9358810 9358815 - X_9358810_9358815_- 0.892633635 0.998316497 0.945475066 0.074729095 mgl FBtr0343369 9358494 9360313 X - 9358791 9358937 3'utr mgl FlyBase G66012.1 ATATATAAATATTTTATTTTTTAATTATATCATCGATTTATGAATTGTATTATGATTTATGATTTATCTTTCTCTTCGAAAGTCGAAATGTGTGTGCATTTTTTTTTTCATTTTCGTTCTCTGTGCAAAATCTGTGCTTCCCTTCAT 54 9358806 0.985338275 19 48 562 0.897058824 1.484299839 0.382352941 0.203703704 0.367647059 54 6 1 61 X:9358791-9358937 6 mgl FBtr0343369 9358494 9360313 GTGCAA 6mer3-8 dme-miR-92b-3p X - 9358774 9358864 3'utr mgl FlyBase G49711.1 CTTCGAAAGTCGAAATGTGTGTGCATTTTTTTTTTCATTTTCGTTCTCTGTGCAAAATCTGTGCTTCCCTTCATTTAAGCGTGTTTTAGCA 39 9358806 0.989924429 13 37 365 0.962962963 1.716003344 0.240740741 0.307692308 0.5 39 2 0 52 X:9358774-9358864 6 36.5 3860 FBgn0261260 1607.083333 11.89333333 18.17 0.022711952 3.068946188 2.008805724 -9 -9 -9 0.2 dme-miR-282-5p 6mer2-7 GAGGCT X 939244 939249 + X_939244_939249_+ 0.992275217 0.991530292 0.991902755 0.000526724 CG32815 FBtr0307181|FBtr0345512 938011|938011 939424|939424 X + 939220 939259 3'utr CG32815 FlyBase G57881.1 TACAGAGTAAGTTACGCAAAGTATGAGGCTTGCATTTACA 13 939244 0.852187287 3 13 73 1 1.204119983 0 0.153846154 0.3125 13 0 0 16 X:939220-939259 6 CG32815 FBtr0345512|FBtr0307181 938011|938011 939424|939424 GAGGCT 6mer2-7 dme-miR-282-5p X + 939228 939254 3'utr CG32815 FlyBase G43788.1 AAGTTACGCAAAGTATGAGGCTTGCAT 5 939243 0.657457466 2 5 23 1 0.903089987 0 0.6 0.75 5 0 0 8 X:939228-939254 6 9 3861 FBgn0052815 22.11333333 0.906666667 1.36 0.406994272 9.926470588 6.617647059 0 1 0.5 0.2 dme-miR-79-3p 7mer-m8 TAGCTTT X 939309 939315 - X_939309_939315_- 0.61931141 0.617263708 0.618287559 0.001447943 CG3704 FBtr0070188 939168 939463 X - 939277 939368 3'utr CG3704 FlyBase G63941.1 GTGTGTTCGTCACTTGCACCTCCGATATTTGGTTTGTATATATGGACTTAGTTTAGCTTTGCAAATTAGTGATAACATATACATATGGAGGA 43 939303 0.924611062 12 41 418 0.98245614 1.748188027 0.140350877 0.186046512 0.385964912 43 1 0 56 X:939277-939368 7 CG3704 FBtr0070188 939168 939463 TAGCTTT 7mer-m8 dme-miR-79-3p X - 939255 939385 3'utr CG3704 FlyBase G48199.1 AAAACATTCAATATAGTGTGTGTTCGTCACTTGCACCTCCGATATTTGGTTTGTATATATGGACTTAGTTTAGCTTTGCAAATTAGTGATAACATATACATATGGAGGATATATCCCGCTCGTAAATGTAA 44 939303 0.98851116 16 43 391 0.983870968 1.785329835 0.209677419 0.295454545 0.5 44 1 0 61 X:939255-939385 7 29 3862 FBgn0040346 168.8866667 13.69666667 21.07 0.171712786 2.11730348 1.376364499 -12 -12 -12 0.2 dme-miR-986-5p 6mer2-7 TTCGAG X 939417 939422 - X_939417_939422_- 0.910846792 0.822865733 0.866856262 0.062212032 CG3704 FBtr0070188 939168 939463 X - 939412 939465 stop_codon CG3704 FlyBase G63942.1 AAATGGGCGGATTGTGATCCTCGATGGCTATGGATTTCGTGATTTCGAGTTTTC 84 939441 0.76280874 11 81 720 0.981132075 2.017033339 0.528301887 0.226190476 0.386792453 84 2 0 104 X:939412-939465 6 CG3704 FBtr0070188 939168 939463 TTCGAG 6mer2-7 dme-miR-986-5p X - 939412 939472 stop_codon CG3704 FlyBase G48200.1 CAGCCGTAAATGGGCGGATTGTGATCCTCGATGGCTATGGATTTCGTGATTTCGAGTTTTC 61 939441 0.912546469 10 60 499 0.989130435 1.959041392 0.52173913 0.442622951 0.630434783 61 1 0 91 X:939412-939472 6 31.5 3863 FBgn0040346 168.8866667 13.69666667 21.07 0.186515612 2.299829642 1.495016611 19 19 19 0.2 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 942565 942570 + X_942565_942570_+ 0.871512811 0.881136968 0.876324889 0.006805337 mus81 FBtr0070170|FBtr0070170|FBtr0070170 942473|942473|942473 943229|943229|943229 X + 942519 942614 3'utr mus81 FlyBase G57884.1 GAGTTTATACATAAGTGAGAGAGAGAATACGTTGGACATTGAATAGTGTGATCTAGTCTAAGCCAAAAAATGTACAAGTCAGCCGCCCTTAGATGT 264 942551 0.751229806 15 256 1614 0.969491525 2.155336037 0.122033898 0.117870722 0.213559322 263 8 1 286 X:942519-942614 6 mus81 FBtr0070170|FBtr0070170|FBtr0070170 942473|942473|942473 943229|943229|943229 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X + 942482 942600 3'utr mus81 FlyBase G43791.1 AATTGATTTTATGGGACATATCTAAGGTTATATACACGAGTTTATACATAAGTGAGAGAGAGAATACGTTGGACATTGAATAGTGTGATCTAGTCTAAGCCAAAAAATGTACAAGTCAG 203 942551 0.976842124 16 195 1264 0.950331126 2.156851901 0.132450331 0.36453202 0.572847682 203 14 1 287 X:942482-942600 6 99 3864 FBgn0040347 59.78 3.366666667 5.13 1.656072265 29.40594059 19.29824561 14 14 14 0.2 dme-miR-1012-3p 6mer3-8 TTGACT X 9555679 9555684 - X_9555679_9555684_- 0.99919804 0.69546782 0.84733293 0.214769684 CG15317 FBtr0071371 9555605 9555781 X - 9555634 9555707 3'utr CG15317 FlyBase G66070.1 TTATATATTAACTAACTGAGCTATTGACTTTTATTATAAAAATGTTACGTATATTTTCTGTGCAGCTCCAGCAG 179 9555677 0.8096055 11 177 1726 0.99122807 2.354108439 0.171052632 0.189944134 0.364035088 179 2 0 226 X:9555634-9555707 6 CG15317 FBtr0071371 9555605 9555781 TTGACT 6mer3-8 dme-miR-1012-3p X - 9555662 9555701 3'utr CG15317 FlyBase G49742.1 ATTAACTAACTGAGCTATTGACTTTTATTATAAAAATGTT 125 9555677 0.613556923 5 124 1201 0.989189189 2.26245109 0.259459459 0.368 0.572972973 125 2 0 183 X:9555662-9555701 6 148 3865 FBgn0030137 41 6.273333333 9.553333333 3.609756098 23.59192349 15.49197488 -7 -7 -7 0.2 dme-miR-252-5p 8mer-A1 GTACTTAA X 9571917 9571924 - X_9571917_9571924_- 0.392574631 0.393089029 0.39283183 0.000363736 CG32699 FBtr0110850 9571535 9573007 X - 9571858 9571948 3'utr CG32699 FlyBase G66082.1 GATCTAAACGACAGAGCACAGCCTGTACTTAAGTCAAGCCATCTTGGGCACACCCCAACCTCTCACACAGTCTGTTCTAAATATGTTATAA 21 9571925 0.98101319 4 20 108 0.961538462 1.096910013 0.230769231 0.19047619 0.346153846 21 0 1 25 X:9571858-9571948 8 CG32699 FBtr0110850 9571535 9573007 GTACTTAA 8mer-A1 dme-miR-252-5p X - 9571899 9571942 3'utr CG32699 FlyBase G49748.1 AACGACAGAGCACAGCCTGTACTTAAGTCAAGCCATCTTGGGCA 16 9571925 0.974578716 2 16 66 1 1.380211242 0.083333333 0.3125 0.541666667 16 0 0 24 X:9571899-9571942 8 16.5 3866 FBgn0052699 2538.573333 91.48333333 141.3333333 0.006499714 0.180360721 0.116745283 1 1 1 0.2 dme-miR-1006-3p 7mer-A1 GAATTTA X 9572113 9572119 - X_9572113_9572119_- 0.822837441 0.789746829 0.806292135 0.023398588 CG32699 FBtr0110850 9571535 9573007 X - 9572098 9572131 3'utr CG32699 FlyBase G66083.1 ATTGCTGAATTTGAATTTAAGGATCTCCGATCTG 7 9572115 0.845304947 5 7 54 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 X:9572098-9572131 7 CG32699 FBtr0110850 9571535 9573007 GAATTTA 7mer-A1 dme-miR-1006-3p X - 9572094 9572119 3'utr CG32699 FlyBase G49749.1 GAATTTAAGGATCTCCGATCTGTTGT 5 9572115 0.70810413 3 3 40 0.833333333 0.698970004 0.833333333 0.2 0.333333333 5 1 0 5 X:9572094-9572119 7 6 3867 FBgn0052699 2538.573333 91.48333333 141.3333333 0.002363532 0.065585717 0.04245283 -4 -4 -4 0.2 dme-miR-282-5p 6mer3-8 AGAGGC X 9572584 9572589 - X_9572584_9572589_- 0.614463089 0.977601811 0.79603245 0.256777837 CG32699 FBtr0110850 9571535 9573007 X - 9572571 9572625 3'utr CG32699 FlyBase G66085.1 ACTTAGAGGATATATAAACATGTATGTATCTCATTTAGAGGCAGGCAAATCAAAC 68 9572601 0.702815361 8 65 557 0.963414634 1.596597096 0.06097561 0.205882353 0.341463415 68 2 1 79 X:9572571-9572625 6 CG32699 FBtr0110850 9571535 9573007 AGAGGC 6mer3-8 dme-miR-282-5p X - 9572576 9572628 3'utr CG32699 FlyBase G49751.1 AAAACTTAGAGGATATATAAACATGTATGTATCTCATTTAGAGGCAGGCAAAT 53 9572601 0.814712527 6 51 445 0.973333333 1.86332286 0.026666667 0.320754717 0.52 53 2 0 73 X:9572576-9572628 6 43.5 3868 FBgn0052699 2538.573333 91.48333333 141.3333333 0.017135609 0.475496447 0.307783019 12 12 12 0.2 dme-miR-308-3p 7mer-m1 TGTGATT X 9572664 9572670 - X_9572664_9572670_- 0.507018908 0.514881074 0.510949991 0.005559415 CG32699 FBtr0110850 9571535 9573007 X - 9572643 9572691 3'utr CG32699 FlyBase G66086.1 AAACGCAAGTCATTTCATCTTTGTGATTCTTATTATACACAACTATGTT 77 9572671 0.682805888 9 68 881 0.913978495 1.452297671 0.021505376 0.184210526 0.333333333 76 6 2 85 X:9572643-9572691 7 CG32699 FBtr0110850 9571535 9573007 TGTGATT 7mer-m1 dme-miR-308-3p X - 9572649 9572773 3'utr CG32699 FlyBase G49752.1 AGTTTCATGTGAACAAATGCTCACAGCACATAGATCCGGATCTGATTGCGCCCAGCTATGTTATTATTTATACTCGGACTCCAAACGCAAGTCATTTCATCTTTGTGATTCTTATTATACACAAC 86 9572671 0.928619987 15 81 724 0.952830189 1.402261382 0.094339623 0.197674419 0.349056604 86 2 3 101 X:9572649-9572773 7 59 3869 FBgn0052699 2538.573333 91.48333333 141.3333333 0.023241401 0.644926216 0.41745283 1 1 1 0.2 dme-miR-184-5p 6mer3-8 TGATAA X 9588828 9588833 + X_9588828_9588833_+ 0.999654852 0.537986054 0.768820453 0.326449139 Hex-A FBtr0333335 9587843 9589813 X + 9588759 9588844 3'utr Hex-A FlyBase G60169.1 CTAGGTAATGCTACGGTGTCCTTTCTGTAATTGTAAATGTTTATATAGAACCTATTACGAAGCGTTATATGATAATACTGCATACA 18 9588824 0.703602259 11 17 145 0.952380952 1.301029996 0.095238095 0.166666667 0.285714286 18 1 0 20 X:9588759-9588844 6 Hex-A FBtr0333335 9587843 9589813 TGATAA 6mer3-8 dme-miR-184-5p X + 9588756 9588837 3'utr Hex-A FlyBase G45490.1 TTACTAGGTAATGCTACGGTGTCCTTTCTGTAATTGTAAATGTTTATATAGAACCTATTACGAAGCGTTATATGATAATACT 18 9588823 0.802294235 9 15 131 0.823529412 1.447158031 0.294117647 0.611111111 0.794117647 18 6 0 28 X:9588756-9588837 6 8 3870 FBgn0001186 1183.94 43.5 66.29 0.006757099 0.183908046 0.120681852 4 5 4.5 0.2 dme-miR-1007-3p 6mer3-8 TGAGCT X 9589018 9589023 + X_9589018_9589023_+ 0.886867014 0.93492609 0.910896552 0.033982916 Hex-A FBtr0333335 9587843 9589813 X + 9588976 9589045 3'utr Hex-A FlyBase G60171.1 AAACTGTTTTTTTTTTTCCTTTTGATATAGAAACGCACTTTGTGAGCTATTATTTATGTAATTGTACATT 99 9589015 0.984468024 11 96 766 0.975 1.591064607 0.033333333 0.202020202 0.341666667 99 1 2 117 X:9588976-9589045 6 Hex-A FBtr0333335 9587843 9589813 TGAGCT 6mer3-8 dme-miR-1007-3p X + 9588945 9589042 3'utr Hex-A FlyBase G45492.1 ACACTTAAGCAGGTAAACTCTAAACAAAAATAAACTGTTTTTTTTTTTCCTTTTGATATAGAAACGCACTTTGTGAGCTATTATTTATGTAATTGTAC 56 9589015 0.987737718 14 53 472 0.92 1.537819095 0.053333333 0.214285714 0.413333333 56 5 1 69 X:9588945-9589042 6 71.5 3871 FBgn0001186 1183.94 43.5 66.29 0.060391574 1.643678161 1.078594056 3 3 3 0.2 dme-miR-184-3p 7mer-A1 CCGTCCA X 9604044 9604050 + X_9604044_9604050_+ 0.763207265 0.77532873 0.769267997 0.008571124 Gga FBtr0071363 9604012 9604280 X + 9603978 9604069 stop_codon Gga FlyBase G60182.1 TCGATTGTGGCCAAAGGCATTGACTATGTGGACTAAAATACCCCGACATATAAGTATCACCCGCTCCCGTCCACTGAAAGCGCAGGAGGAAA 125 9604042 0.94823978 8 121 529 0.967532468 1.395035018 0.474025974 0.192 0.344155844 125 0 5 149 X:9603978-9604069 7 Gga FBtr0071363 9604012 9604280 CCGTCCA 7mer-A1 dme-miR-184-3p X + 9604029 9604268 3'utr Gga FlyBase G45496.1 AAGTATCACCCGCTCCCGTCCACTGAAAGCGCAGGAGGAAAATGAAAAGAACGAAAGACAGTCAATTTTCCCGCATCTATGTTGTGCTCCCCATTATCTTAAAGATACTTTTGGTTTTTCAATTTCTGTATTGTATGTGTATGTACGCTGATAAGATTTTTATTCAAATTGCATTTTGCATACAAACGATTTAGTCGTAATATAATTATGTATCAAAGGTTTATAAATTATGAAAAAGTC 98 9604042 0.952880804 17 94 443 0.95 2.123851641 0.514285714 0.316326531 0.521428571 98 7 0 133 X:9604029-9604268 7 91 3872 FBgn0030141 373.9333333 19.18333333 29.23 0.243358888 4.743701129 3.113239822 2 2 2 0.2 dme-miR-305-5p 7mer-m1 GTACAAT X 9604477 9604483 - X_9604477_9604483_- 0.681063938 0.765586564 0.723325251 0.059766574 Lst8 FBtr0071368 9604152 9604877 X - 9604467 9604529 3'utr Lst8 FlyBase G66103.1 AATTACGATCTATCTTAAGCCAGTTAAATCAACAAATATCTCAGATGTACAATCATCCGCAAA 9 9604501 0.975704172 6 8 50 0.888888889 0.903089987 0 0 0 9 1 0 8 X:9604467-9604529 7 Lst8 FBtr0071368 9604152 9604877 GTACAAT 7mer-m1 dme-miR-305-5p X - 9604468 9604502 3'utr Lst8 FlyBase G49764.1 ATCAACAAATATCTCAGATGTACAATCATCCGCAA 5 9604483 0.972030232 4 4 24 0.909090909 1 0 0.8 0.909090909 5 1 0 10 X:9604468-9604502 7 5.5 3873 FBgn0264691 581.5666667 40.63666667 62.58666667 0.009457213 0.135345747 0.087878142 18 0 9 0.2 dme-miR-965-3p 6mer2-7 ACGCTT X 9621751 9621756 + X_9621751_9621756_+ 0.999999068 0.999995288 0.999997178 2.69E-06 CG42797 FBtr0332963|FBtr0303708|FBtr0303709|FBtr0303710 9621666|9621666|9621666|9621666 9622441|9622441|9622166|9623243 X + 9621732 9621775 5'utr CG42797 FlyBase G60189.1 ACACAAAACACGCGCCTAAACGCTTTATTTCGATTTTAGAAGTT 29 9621748 0.97936369 4 27 188 0.90625 1.462397998 0.1875 0.103448276 0.1875 29 3 0 29 X:9621732-9621775 6 CG42797 FBtr0303710|FBtr0303709|FBtr0303708|FBtr0332963 9621666|9621666|9621666|9621666 9623243|9622166|9622441|9622441 ACGCTT 6mer2-7 dme-miR-965-3p X + 9621728 9621767 5'utr CG42797 FlyBase G45501.1 AGATACACAAAACACGCGCCTAAACGCTTTATTTCGATTT 12 9621748 0.969116415 4 12 70 1 1.204119983 0 0.25 0.4375 12 0 0 16 X:9621728-9621767 6 20.5 3874 FBgn0261931 415.6266667 8.42 12.89333333 0.04932311 2.434679335 1.589968976 3 3 3 0.2 dme-miR-1002-5p 6mer3-8 CTACTT X 9622176 9622181 + X_9622176_9622181_+ 0.517321569 0.857714823 0.687518196 0.24069434 CG42797 FBtr0332963|FBtr0303708|FBtr0303710 9621666|9621666|9621666 9622441|9622441|9623243 X + 9622153 9622225 5'utr-coding CG42797 FlyBase G60191.1 ATGCCTAGCCATAGACAGACTTGCTACTTTAGGCATGGCATCCCACTAGTTTGTAGACAATTTGCCTTCGCCT 7 9622181 0.973934829 6 6 44 0.875 0.84509804 0.125 0.142857143 0.25 7 1 0 7 X:9622153-9622225 6 CG42797 FBtr0303710|FBtr0303708|FBtr0332963 9621666|9621666|9621666 9623243|9622441|9622441 CTACTT 6mer2-7 dme-miR-968-5p X + 9622133 9622193 5'utr-coding CG42797 FlyBase G45503.1 CAAAATTGTAAAGCAAATAAATGCCTAGCCATAGACAGACTTGCTACTTTAGGCATGGCAT 6 9622175 0.965650451 6 6 32 1 1.079181246 0 0.5 0.75 6 0 0 12 X:9622133-9622193 6 4 3875 FBgn0261931 415.6266667 8.42 12.89333333 0.009624022 0.475059382 0.310237849 -5 1 -2 0.2 dme-miR-968-5p 8mer-A1 ACTACTTA X 9623132 9623139 + X_9623132_9623139_+ 0.51207478 0.495943491 0.504009135 0.011406552 CG42797 FBtr0303710 9621666 9623243 X + 9623027 9623139 3'utr CG42797 FlyBase G60196.2 TTACATGTATTTTTGGCATTAGTTAATACGGAAAGCGACGGAGATGGAGAGAGACAGAGCTAAAGGCAGTGAAAGAGACAGAGAAAGAAAGATAACGCTTTTTGAACTACTTA 152 9623127 0.946362888 11 126 441 0.921348315 1.913813852 0.224719101 0.157894737 0.280898876 152 13 1 164 X:9623027-9623139 8 CG42797 FBtr0303710 9621666 9623243 ACTACTTA 8mer-A1 dme-miR-968-5p X + 9623050 9623132 3'utr CG42797 FlyBase G45509.1 TAATACGGAAAGCGACGGAGATGGAGAGAGACAGAGCTAAAGGCAGTGAAAGAGACAGAGAAAGAAAGATAACGCTTTTTGAA 89 9623127 0.94349867 7 77 226 0.916666667 1.605664116 0.318181818 0.393258427 0.590909091 89 9 2 121 X:9623050-9623132 1 24.5 3876 FBgn0261931 415.6266667 8.42 12.89333333 0.058947132 2.909738717 1.900206825 5 5 5 0.2 dme-miR-283-5p 6mer3-8 TGATAT X 9628972 9628977 - X_9628972_9628977_- 0.688979945 0.537991876 0.61348591 0.106764639 l(1)G0232 FBtr0071405|FBtr0333427|FBtr0071406|FBtr0100193|FBtr0071407|FBtr0100192|FBtr0303559|FBtr0071404|FBtr0303558 9628720|9628720|9628720|9626293|9626292|9628720|9628720|9628720|9626293 9629105|9629105|9629105|9629105|9629105|9629105|9629105|9629105|9629105 X - 9628956 9628999 3'utr l(1)G0232 FlyBase G66119.1 TCGACTAGATAGATGTTCGTCCTGATATGATATAATATGGTATA 11 9628977 0.980432118 5 11 73 1 1.278753601 0 0.636363636 0.789473684 11 0 0 19 X:9628956-9628999 6 l(1)G0232 FBtr0100193|FBtr0071406|FBtr0333427|FBtr0071405|FBtr0303558|FBtr0071404|FBtr0303559|FBtr0071407|FBtr0100192 9626293|9628720|9628720|9628720|9626293|9628720|9628720|9626292|9628720 9629105|9629105|9629105|9629105|9629105|9629105|9629105|9629105|9629105 TGATAT 6mer3-8 dme-miR-283-5p X - 9628950 9629015 3'utr l(1)G0232 FlyBase G49777.1 GGAGTTGTAACTTTCTTCGACTAGATAGATGTTCGTCCTGATATGATATAATATGGTATATATGAT 16 9628977 0.972570574 10 15 129 0.956521739 1.041392685 0.217391304 0.3125 0.52173913 16 0 1 22 X:9628950-9629015 6 11.5 3877 FBgn0028341 422.0033333 16.54 25.49666667 0.02725097 0.69528416 0.451039352 0 0 0 0.2 dme-miR-308-3p 7mer-m1 TGTGATT X 9666507 9666513 - X_9666507_9666513_- 0.521142008 0.521170503 0.521156255 2.02E-05 nej FBtr0333521|FBtr0302723 9665671|9665440 9669706|9669706 X - 9666501 9666544 3'utr nej FlyBase G66134.1 AGAGAAAGAGAGAGCATATTCCAAAACTATTTGTGATTACAATT 22 9666515 0.968020355 5 22 123 1 1.462397998 0.172413793 0.272727273 0.448275862 22 0 0 29 X:9666501-9666544 7 nej FBtr0333521|FBtr0302723 9665671|9665440 9669706|9669706 TGTGATT 7mer-m1 dme-miR-308-3p X - 9666467 9666543 3'utr nej FlyBase G49788.1 GAGAAAGAGAGAGCATATTCCAAAACTATTTGTGATTACAATTATATATGATGATGATGAAGAGGAAGAAAGCGGAA 26 9666514 0.976159546 7 25 161 0.972972973 1.255272505 0.135135135 0.346153846 0.540540541 26 0 1 36 X:9666467-9666543 7 16.5 3878 FBgn0261617 2552.683333 20.01666667 30.83666667 0.006463786 0.824313072 0.535077289 2 1 1.5 0.2 dme-miR-34-5p 6mer3-8 CACTGC X 9667624 9667629 - X_9667624_9667629_- 0.910149748 0.980914825 0.945532287 0.050038482 nej FBtr0333521|FBtr0302723 9665671|9665440 9669706|9669706 X - 9667593 9667700 3'utr nej FlyBase G66139.1 GACAGCAAGAGAGCGAGACAGTAGATGAGCAGGAGAGGATTTTGTAAATTTTAGATACTAGGATACTTATTCACTGCGCATAAAAATGCCTTCAATTGCGACATCAGC 20 9667613 0.959421575 7 20 107 1 1.431363764 0.37037037 0.35 0.518518519 20 0 0 27 X:9667593-9667700 6 nej FBtr0333521|FBtr0302723 9665671|9665440 9669706|9669706 CACTGC 6mer3-8 dme-miR-34-5p X - 9667594 9667693 3'utr nej FlyBase G49790.1 AGAGAGCGAGACAGTAGATGAGCAGGAGAGGATTTTGTAAATTTTAGATACTAGGATACTTATTCACTGCGCATAAAAATGCCTTCAATTGCGACATCAG 19 9667614 0.964004892 8 19 105 1 1.414973348 0.153846154 0.315789474 0.5 19 0 0 26 X:9667594-9667693 6 10 3879 FBgn0261617 2552.683333 20.01666667 30.83666667 0.003917446 0.49958368 0.324289266 -16 -15 -15.5 0.2 dme-miR-305-3p 7mer-m8 ATGTGCC X 9668813 9668819 - X_9668813_9668819_- 0.674497699 0.672800555 0.673649127 0.001200031 nej FBtr0333521|FBtr0302723 9665671|9665440 9669706|9669706 X - 9668795 9668828 3'utr nej FlyBase G66145.1 ATAGTGAACATGTGCCTGTTGGCGATCGGCAGTT 8 9668818 0.696456039 4 8 48 1 1 0 0.125 0.3 8 0 0 10 X:9668795-9668828 7 nej FBtr0333521|FBtr0302723 9665671|9665440 9669706|9669706 ATGTGCC 7mer-m8 dme-miR-305-3p X - 9668797 9668837 3'utr nej FlyBase G49797.1 ATATAGCCTATAGTGAACATGTGCCTGTTGGCGATCGGCAG 5 9668818 0.936083545 3 4 33 0.833333333 0.698970004 0 0.2 0.333333333 5 1 0 5 X:9668797-9668837 7 6 3880 FBgn0261617 2552.683333 20.01666667 30.83666667 0.002350468 0.299750208 0.19457356 -1 -1 -1 0.2 dme-miR-14-3p 7mer-A1 AGACTGA X 9669618 9669624 - X_9669618_9669624_- 0.82302147 0.823325261 0.823173366 0.000214819 nej FBtr0333521|FBtr0302723|FBtr0071402|FBtr0302722 9665671|9665440|9669513|9669513 9669706|9669706|9669706|9669706 X - 9669529 9669660 5'utr nej FlyBase G66150.1 ATGGTTGGTAGGCGATGTGGCTAGAGGGCTAGGGCTAGACTGAATGAATGAATGAGTGTCCAGTAGCCGCAGACGGGATGACGACGAAGACCAACCGGCAGGGATAACCAGTGTGTGTTAAGCGAATTAACA 53 9669625 0.904449717 15 49 208 0.925373134 1.792391689 0.373134328 0.226415094 0.388059701 53 5 0 62 X:9669529-9669660 7 nej FBtr0071402|FBtr0302722|FBtr0333521|FBtr0302723 9669513|9669513|9665671|9665440 9669706|9669706|9669706|9669706 AGACTGA 7mer-A1 dme-miR-14-3p X - 9669569 9669664 5'utr nej FlyBase G49801.1 TACAATGGTTGGTAGGCGATGTGGCTAGAGGGCTAGGGCTAGACTGAATGAATGAATGAGTGTCCAGTAGCCGCAGACGGGATGACGACGAAGACC 42 9669625 0.93079366 9 41 155 0.985074627 1.819543936 0.343283582 0.380952381 0.611940299 42 1 0 66 X:9669569-9669664 7 31 3881 FBgn0261617 2552.683333 20.01666667 30.83666667 0.012144084 1.548709409 1.005296725 1 1 1 0.25 dme-miR-92b-3p 7mer-A1 TGCAATA 2L 10008039 10008045 + 2L_10008039_10008045_+ 0.510358086 0.378446962 0.444402524 0.093275233 CG4747 FBtr0079930|FBtr0303902 10007765|10007765 10008889|10008889 2L + 10007994 10008097 3'utr CG4747 FlyBase G3638.1 AACCTTCTGCATCTTCCCCAATCGCCCCATATGCAAAGCGTTTAATGCAATATGTCTACGATTCGCCGGGAATCGCAGAACCGTGTCGTCCTGCTTTCAACGCA 13 10008036 0.855021413 10 12 71 0.941176471 1.204119983 0.117647059 0.307692308 0.470588235 13 1 0 16 2L:10007994-10008097 7 CG4747 FBtr0079930|FBtr0303902 10007765|10007765 10008889|10008889 TGCAATA 7mer-A1 dme-miR-92b-3p 2L + 10008025 10008049 3'utr CG4747 FlyBase G2873.1 TGCAAAGCGTTTAATGCAATATGTC 4 10008038 0.716668906 2 3 20 0.857142857 0.77815125 0.428571429 0.5 0.714285714 4 1 0 6 2L:10008025-10008049 7 3.5 1 FBgn0043456 4161.81 159.8633333 245.0833333 0.00084098 0.021893701 0.014280857 3 1 2 0.25 dme-miR-305-5p 7mer-A1 GTACAAA 2L 10008362 10008368 + 2L_10008362_10008368_+ 0.755586851 0.757591592 0.756589222 0.001417537 CG4747 FBtr0079930|FBtr0303902 10007765|10007765 10008889|10008889 2L + 10008342 10008391 3'utr CG4747 FlyBase G3640.1 ATACTGCATCCGAATAAAATGTACAAAGCATACTTGTGAAAGACAACGCC 10 10008361 0.930338526 4 9 35 0.916666667 0.740362689 0.083333333 0.2 0.333333333 10 0 1 11 2L:10008342-10008391 7 CG4747 FBtr0079930|FBtr0303902 10007765|10007765 10008889|10008889 GTACAAA 7mer-A1 dme-miR-305-5p 2L + 10008331 10008373 3'utr CG4747 FlyBase G2874.1 AAGTGTATAGAATACTGCATCCGAATAAAATGTACAAAGCATA 6 10008358 0.865282217 3 5 18 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2L:10008331-10008373 7 7 2 FBgn0043456 4161.81 159.8633333 245.0833333 0.00168196 0.043787402 0.028561714 1 4 2.5 0.25 dme-miR-184-3p 6mer3-8 TCCGTC 2L 10011984 10011989 + 2L_10011984_10011989_+ 0.970699871 0.959203706 0.964951788 0.008129041 Trp1 FBtr0305986|FBtr0343741 10011911|10011911 10012118|10012118 2L + 10011956 10012010 3'utr Trp1 FlyBase G3649.1 CGAATTTGTATTTATAATTTCTTTTATTTCCGTCGAACTTTTGGTTGTATGTTTT 220 10011983 0.748555056 9 220 2429 1 2.440909082 0.054347826 0.190909091 0.355072464 220 0 0 276 2L:10011956-10012010 6 Trp1 FBtr0305986|FBtr0343741 10011911|10011911 10012118|10012118 TCCGTC 6mer3-8 dme-miR-184-3p 2L + 10011962 10012010 3'utr Trp1 FlyBase G2880.1 TGTATTTATAATTTCTTTTATTTCCGTCGAACTTTTGGTTGTATGTTTT 158 10011983 0.757499048 10 156 1705 0.982300885 2.045322979 0.088495575 0.310126582 0.517699115 158 3 1 222 2L:10011962-10012010 6 188 3 FBgn0011584 1171.806667 85.36666667 131.8133333 0.160436022 2.20226474 1.426259357 1 1 1 0.25 dme-miR-276a-3p 6mer2-7 GTTCCT 2L 10012081 10012086 + 2L_10012081_10012086_+ 0.999657133 0.998090571 0.998873852 0.001107683 Trp1 FBtr0305986|FBtr0343741 10011911|10011911 10012118|10012118 2L + 10012025 10012102 3'utr Trp1 FlyBase G3650.1 ATATTGAATAGCGCAAAAGACATACATTAACTTTAGCTTTTAATTGTAAATCCTTTGTTCCTTAATAAATATTATTGT 26 10012079 0.993348097 9 26 317 1 1.505149978 0.125 0.230769231 0.375 26 0 0 32 2L:10012025-10012102 6 Trp1 FBtr0305986|FBtr0343741 10011911|10011911 10012118|10012118 GTTCCT 6mer2-7 dme-miR-276a-3p 2L + 10012026 10012098 3'utr Trp1 FlyBase G2881.1 TATTGAATAGCGCAAAAGACATACATTAACTTTAGCTTTTAATTGTAAATCCTTTGTTCCTTAATAAATATTA 21 10012079 0.992228769 8 19 213 0.870967742 1.431363764 0.225806452 0.380952381 0.580645161 21 4 0 27 2L:10012026-10012098 6 17 4 FBgn0011584 1171.806667 85.36666667 131.8133333 0.014507513 0.199140961 0.128970261 2 2 2 0.25 dme-miR-1003-3p 8mer-A1 ATGTGAGA 2L 10013106 10013113 + 2L_10013106_10013113_+ 0.486581137 0.448031706 0.467306421 0.027258542 Trp1 FBtr0079931|FBtr0079932 10012492|10012492 10013170|10013170 2L + 10013080 10013120 3'utr Trp1 FlyBase G3652.1 AAATAAAGCTAGGCAATTCTGATCTGATGTGAGAGATATTT 50 10013099 0.613291843 6 45 346 0.907692308 1.071882007 0.369230769 0.28 0.446153846 50 2 4 59 2L:10013080-10013120 8 Trp1 FBtr0079931|FBtr0079932 10012492|10012492 10013170|10013170 ATGTGAGA 8mer-A1 dme-miR-1003-3p 2L + 10013065 10013120 3'utr Trp1 FlyBase G2883.1 AATTAACTATTATATAAATAAAGCTAGGCAATTCTGATCTGATGTGAGAGATATTT 53 10013099 0.622704741 8 50 341 0.915662651 1.880813592 0.313253012 0.396226415 0.614457831 53 7 0 76 2L:10013065-10013120 8 49 5 FBgn0011584 1171.806667 85.36666667 131.8133333 0.041815772 0.573994533 0.371737811 7 7 7 0.25 dme-miR-305-5p 6mer3-8 AGTACA 2L 10114 10119 - 2L_10114_10119_- 0.959396134 0.939053636 0.949224885 0.01438432 l(2)gl FBtr0078168|FBtr0306591|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0306590|FBtr0078170|FBtr0330655|FBtr0078171|FBtr0306592|FBtr0078166 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11214|11214|11214|11214|11309|11214|11214|11214 2L - 10108 10152 3'utr l(2)gl FlyBase G6257.1 TGAGAAGTAAGTTAATGAGCCTTCAAGTACTTTAGTACATAATGT 25 10137 0.747475541 5 23 187 0.961538462 1.096910013 0.269230769 0.04 0.076923077 25 0 1 25 2L:10108-10152 6 l(2)gl FBtr0306592|FBtr0306590|FBtr0078166|FBtr0330655|FBtr0078171|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0078170|FBtr0078168|FBtr0306591 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11309|11214|11214|11214|11214|11214|11214|11214 AGTACA 6mer3-8 dme-miR-305-5p 2L - 10108 10152 3'utr l(2)gl FlyBase G4879.1 TGAGAAGTAAGTTAATGAGCCTTCAAGTACTTTAGTACATAATGT 13 10121 0.637309891 6 13 93 1 1.322219295 0.142857143 0.461538462 0.666666667 13 0 0 21 2L:10108-10152 6 12.5 6 FBgn0002121 6538.69 148.3266667 227.85 0.001911698 0.08427345 0.054860654 18 2 10 0.25 dme-bantam-3p 6mer2-7 GATCTC 2L 102021 102026 + 2L_102021_102026_+ 0.948679834 0.978911793 0.963795814 0.021377252 Zir FBtr0078103 101917 102086 2L + 101952 102079 3'utr Zir FlyBase G440.1 ATCATACTTTTGGTCTTTCATGTCTAGCGTATCGGATTATTTTAAGTAAATCTTACATTTTAAATTATCGATCTCTATAATTGCTAATGTAATAGCATAACTTTTTTATGCATCTAATAGATTAAGCA 152 102029 0.990765267 18 144 1487 0.952380952 1.954242509 0.259259259 0.171052632 0.333333333 152 8 1 180 2L:101952-102079 6 Zir FBtr0078103 101917 102086 GATCTC 6mer2-7 dme-bantam-3p 2L + 101991 102079 3'utr Zir FlyBase G370.1 TTTTAAGTAAATCTTACATTTTAAATTATCGATCTCTATAATTGCTAATGTAATAGCATAACTTTTTTATGCATCTAATAGATTAAGCA 107 102029 0.974162651 13 97 1051 0.905660377 1.857332496 0.182389937 0.38317757 0.58490566 107 14 1 144 2L:101991-102079 6 122.5 7 FBgn0031216 988 18.33333333 28.1 0.123987854 6.681818182 4.359430605 -8 -8 -8 0.25 dme-miR-34-5p 8mer-A1 CACTGCCA 2L 10202680 10202687 - 2L_10202680_10202687_- 0.677013173 0.676815573 0.676914373 0.000139724 CG34159 FBtr0112350 10202518 10202882 2L - 10202635 10202704 3'utr CG34159 FlyBase G9506.1 AAAAAACGATTTAAATCCACTGCCAGCTGAAAGGCAAACCATGATTCAATAAAGTGTACATTGGCAAACG 41 10202689 0.9615275 7 39 196 0.957446809 1.653212514 0.319148936 0.146341463 0.255319149 41 2 0 45 2L:10202635-10202704 8 CG34159 FBtr0112350 10202518 10202882 CACTGCCA 8mer-A1 dme-miR-34-5p 2L - 10202613 10202703 3'utr CG34159 FlyBase G7375.1 AAAAACGATTTAAATCCACTGCCAGCTGAAAGGCAAACCATGATTCAATAAAGTGTACATTGGCAAACGATTTTTATCCCTGGCACCCTGA 15 10202689 0.970356615 5 12 69 0.782608696 0.954242509 0.304347826 0.4 0.608695652 15 4 1 18 2L:10202613-10202703 8 25 8 FBgn0085188 482 64.53 98.53333333 0.05186722 0.387416705 0.253721245 2 2 2 0.25 dme-miR-1012-3p 6mer3-8 TTGACT 2L 10204785 10204790 - 2L_10204785_10204790_- 0.999757972 0.999938647 0.999848309 0.000127703 CG5734 FBtr0079960 10204755 10205368 2L - 10204764 10204827 3'utr CG5734 FlyBase G9509.1 CTAAACAATGAACTATGAATGTACATTCCCTTATCTGTTGACTCACTTCCAAATAAATGACAAA 21 10204790 0.990806718 8 19 191 0.92 0.884606581 0.04 0.142857143 0.28 21 0 2 23 2L:10204764-10204827 6 CG5734 FBtr0079960 10204755 10205368 TTGACT 6mer3-8 dme-miR-1012-3p 2L - 10204758 10204818 3'utr CG5734 FlyBase G7377.1 GAACTATGAATGTACATTCCCTTATCTGTTGACTCACTTCCAAATAAATGACAAAAATGTT 16 10204790 0.969612823 8 14 138 0.904761905 1.278753601 0.238095238 0.3125 0.476190476 16 2 0 19 2L:10204758-10204818 6 16 9 FBgn0032191 425.53 23.29666667 35.42 0.037600169 0.686793533 0.451722191 0 0 0 0.25 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 10243 10248 - 2L_10243_10248_- 0.836704196 0.718728567 0.777716382 0.083421347 l(2)gl FBtr0078168|FBtr0306591|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0306590|FBtr0078170|FBtr0330655|FBtr0078171|FBtr0306592|FBtr0078166 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11214|11214|11214|11214|11309|11214|11214|11214 2L - 10221 10293 3'utr l(2)gl FlyBase G6258.1 TATTTAATTCTTTGGCTAATACGTCAGTTAAAAAAGGCTACATTTTGATGATACTCACAAATGTAATTTTTGC 52 10245 0.751064451 6 46 396 0.901639344 1.439332694 0.098360656 0.134615385 0.262295082 52 5 1 55 2L:10221-10293 6 l(2)gl FBtr0306592|FBtr0306590|FBtr0078166|FBtr0330655|FBtr0078171|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0078170|FBtr0078168|FBtr0306591 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11309|11214|11214|11214|11214|11214|11214|11214 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L - 10196 10262 3'utr l(2)gl FlyBase G4880.1 AAAAGGCTACATTTTGATGATACTCACAAATGTAATTTTTGCATTCTACACAGGTGCAATTAAAAAA 23 10245 0.983430263 3 22 169 0.948717949 1.568201724 0.102564103 0.47826087 0.692307692 23 2 0 37 2L:10196-10262 6 35 10 FBgn0002121 6538.69 148.3266667 227.85 0.005352754 0.235965661 0.153609831 -3 -3 -3 0.25 dme-miR-1006-3p 7mer-A1 GAATTTA 2L 10256920 10256926 - 2L_10256920_10256926_- 0.819959205 0.778311797 0.799135501 0.029449159 Pten FBtr0089905|FBtr0089901 10256317|10256317 10257117|10257117 2L - 10256912 10256960 5'utr Pten FlyBase G9592.1 GATCGATTACAGCTGCGCTCTGCACATCTGTTTAGAATTTAATGTACAT 9 10256931 0.977496252 7 9 66 1 1.041392685 0.181818182 0.222222222 0.363636364 9 0 0 11 2L:10256912-10256960 7 Pten FBtr0089905|FBtr0089901 10256317|10256317 10257117|10257117 GAATTTA 7mer-A1 dme-miR-1006-3p 2L - 10256917 10256962 5'utr Pten FlyBase G7439.1 ACGATCGATTACAGCTGCGCTCTGCACATCTGTTTAGAATTTAATG 8 10256931 0.980928934 5 8 59 1 0.903089987 0.125 0 0 8 0 0 8 2L:10256917-10256962 7 4 11 FBgn0026379 759.45 36.16 55.47 0.00526697 0.110619469 0.072111051 5 5 5 0.25 "dme-miR-995-3p,dme-miR-998-3p" 6mer2-7 GGTGCT 2L 10311174 10311179 - 2L_10311174_10311179_- 0.890414754 0.754403694 0.822409224 0.096174371 l(2)SH0834 FBtr0080062 10311048 10311329 2L - 10311163 10311221 3'utr l(2)SH0834 FlyBase G9702.1 AAAACAACCACCATTGCGTTTTCAGCACTGGCAGCGACTTTAGGTGCTGTACAGCACTG 14 10311181 0.961338805 5 14 74 1 1.204119983 0 0.071428571 0.1875 14 0 0 16 2L:10311163-10311221 6 l(2)SH0834 FBtr0080062 10311048 10311329 GGTGCT 6mer2-7 "dme-miR-995-3p,dme-miR-998-3p" 2L - 10311172 10311203 3'utr l(2)SH0834 FlyBase G7519.1 TTTTCAGCACTGGCAGCGACTTTAGGTGCTGT 6 10311181 0.858038448 2 6 30 1 1.113943352 0 0.666666667 0.846153846 6 0 0 13 2L:10311172-10311203 6 6.5 12 FBgn0267365 353.5433333 47.94666667 74.01666667 0.018385299 0.135567297 0.087818059 2 2 2 0.25 dme-miR-92b-3p 7mer-m1 TGCAATT 2L 10338710 10338716 + 2L_10338710_10338716_+ 0.581103176 0.678957712 0.630030444 0.069193581 GATAd FBtr0333098 10338407 10339185 2L + 10338633 10338733 3'utr GATAd FlyBase G3782.1 AAATTGAACCAGTATGTCAAAACTTTTAAATAATATCACACTAAATATAGACCTTAAGAGAGGACATCAATACTTAATGCAATTAAATTAAAAATAAAATT 53 10338705 0.974643649 10 51 344 0.970588235 1.819543936 0.014705882 0.226415094 0.397058824 53 2 0 66 2L:10338633-10338733 7 GATAd FBtr0333098 10338407 10339185 TGCAATT 7mer-m1 dme-miR-92b-3p 2L + 10338676 10338727 3'utr GATAd FlyBase G2993.1 AATATAGACCTTAAGAGAGGACATCAATACTTAATGCAATTAAATTAAAAAT 30 10338706 0.668591608 6 26 203 0.787234043 1.568201724 0 0.333333333 0.574468085 30 10 0 37 2L:10338676-10338727 7 38 13 FBgn0032223 1151.333333 44.42 68.51 0.033005211 0.855470509 0.554663553 5 4 4.5 0.25 dme-miR-8-3p 7mer-m8 CAGTATT 2L 10338765 10338771 + 2L_10338765_10338771_+ 0.658443761 0.657583834 0.658013797 0.000608112 GATAd FBtr0333098 10338407 10339185 2L + 10338740 10338788 3'utr GATAd FlyBase G3783.1 ATTTATATTTATTAAAACCATTTTACAGTATTTTTAATTTTTTAATAAC 17 10338762 0.770127933 7 15 206 0.952380952 1.301029996 0 0.176470588 0.333333333 17 1 0 20 2L:10338740-10338788 7 GATAd FBtr0333098 10338407 10339185 CAGTATT 7mer-m8 dme-miR-8-3p 2L + 10338740 10338785 3'utr GATAd FlyBase G2994.1 ATTTATATTTATTAAAACCATTTTACAGTATTTTTAATTTTTTAAT 8 10338761 0.96382894 3 6 85 0.818181818 0.954242509 0 0.375 0.545454545 8 2 0 9 2L:10338740-10338785 7 11.5 14 FBgn0032223 1151.333333 44.42 68.51 0.009988419 0.258892391 0.167858707 3 4 3.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 10338915 10338921 + 2L_10338915_10338921_+ 0.747679503 0.746567988 0.747123745 0.000785949 GATAd FBtr0333098|FBtr0333098|FBtr0333098 10338407|10338407|10338407 10339185|10339185|10339185 2L + 10338870 10338942 3'utr GATAd FlyBase G3784.1 CTAAAAAATAATAATGTTTTAAATCTCTTGCCTATACGAAAATCATGTGATAATATAATAATCTCCACAAAAC 49 10338912 0.909228285 10 46 316 0.954545455 1.799340549 0 0.265306122 0.454545455 49 3 0 63 2L:10338870-10338942 7 GATAd FBtr0333098|FBtr0333098|FBtr0333098 10338407|10338407|10338407 10339185|10339185|10339185 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 10338819 10338939 3'utr GATAd FlyBase G2995.1 AGTTTTAACAATGATTTTTCAGCTGTCTTTGCAATTGAACAACTTCTAAAGCTAAAAAATAATAATGTTTTAAATCTCTTGCCTATACGAAAATCATGTGATAATATAATAATCTCCACAA 40 10338912 0.980032957 11 37 264 0.965517241 1.748188027 0 0.325 0.534482759 40 2 0 56 2L:10338819-10338939 7 37.5 15 FBgn0032223 1151.333333 44.42 68.51 0.032570932 0.844214318 0.547365348 3 3 3 0.25 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2L 10392262 10392267 + 2L_10392262_10392267_+ 0.983909975 0.760829295 0.872369635 0.157741876 da FBtr0332195|FBtr0332196|FBtr0080008 10392193|10392193|10392193 10393228|10392728|10392787 2L + 10392218 10392278 3'utr da FlyBase G3839.1 CTGGAAATCGTCGTCGTCCCTCTCTTCCATAAAAACCGAATGTATTGAAGGCTCCGCGGCC 11 10392258 0.854687359 7 9 56 0.933333333 1.146128036 0.066666667 0.181818182 0.4 11 1 0 14 2L:10392218-10392278 6 da FBtr0080008|FBtr0332195|FBtr0332196 10392193|10392193|10392193 10392787|10393228|10392728 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2L + 10392226 10392282 3'utr da FlyBase G3035.1 CGTCGTCGTCCCTCTCTTCCATAAAAACCGAATGTATTGAAGGCTCCGCGGCCAAGT 6 10392263 0.950861397 5 6 27 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2L:10392226-10392282 6 4 16 FBgn0000413 2154.396667 82.52666667 127.39 0.001856668 0.048469182 0.031399639 4 -1 1.5 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2L 10402800 10402805 + 2L_10402800_10402805_+ 0.999802966 0.999942133 0.99987255 9.84E-05 Cnot4 FBtr0331638|FBtr0304112 10402769|10402769 10403206|10403206 2L + 10402746 10402832 stop_codon Cnot4 FlyBase G3859.1 TTTAAAAAGCCGTCAATTCGTTTAGCTACAATACATATAAATAATACATTTGTTTACCTGTACTCTTTATTAAATATTTCTTAAAGT 25 10402806 0.974140162 8 24 271 1 1.531478917 0 0.32 0.5 25 0 0 34 2L:10402746-10402832 6 Cnot4 FBtr0331638|FBtr0080014|FBtr0304112|FBtr0080013|FBtr0304113|FBtr0080010|FBtr0080012|FBtr0331639|FBtr0331637|FBtr0080009|FBtr0080011 10402769|10402769|10402769|10402769|10402769|10402769|10402769|10402769|10402769|10402769|10402769 10403206|10402882|10403206|10402882|10402882|10402882|10402882|10402882|10402882|10402882|10402882 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2L + 10402788 10402812 3'utr Cnot4 FlyBase G3051.1 AATACATTTGTTTACCTGTACTCTT 6 10402798 0.648814865 3 6 57 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2L:10402788-10402812 6 13.5 17 FBgn0051716 2626.393333 88.17666667 135.32 0.005140129 0.153101728 0.099763523 -6 2 -2 0.25 dme-miR-14-3p 6mer2-7 AGACTG 2L 10403152 10403157 + 2L_10403152_10403157_+ 0.55025299 0.986918632 0.768585811 0.308769207 Cnot4 FBtr0331638|FBtr0304112 10402769|10402769 10403206|10403206 2L + 10403120 10403161 3'utr Cnot4 FlyBase G3861.1 AGCAAAGAAAACCTCGTGATGTGAAATTATCGAGACTGTGTA 8 10403141 0.952754272 5 8 37 1 1.041392685 0.181818182 0.375 0.545454545 8 0 0 11 2L:10403120-10403161 6 Cnot4 FBtr0331638|FBtr0304112 10402769|10402769 10403206|10403206 AGACTG 6mer2-7 dme-miR-14-3p 2L + 10403126 10403171 3'utr Cnot4 FlyBase G3052.1 GAAAACCTCGTGATGTGAAATTATCGAGACTGTGTAAAAATGTCAA 9 10403147 0.97316529 6 9 55 1 1.079181246 0.083333333 0.222222222 0.416666667 9 0 0 12 2L:10403126-10403171 6 6 18 FBgn0051716 2626.393333 88.17666667 135.32 0.002284502 0.068045212 0.044339344 11 5 8 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 2L 104098 104104 - 2L_104098_104104_- 0.520667928 0.521191493 0.520929711 0.000370241 Nhe1 FBtr0301452 103960 104472 2L - 104079 104166 3'utr Nhe1 FlyBase G6295.1 AAAGCACACTACGTCAGTAATTTTAGTTAAAAATATTTATTCATACGAATATATGCTGTATTTGTGATTTTATACATTTTTGAAACCA 191 104105 0.992929741 16 182 2151 0.960869565 1.742332282 0.126086957 0.183246073 0.32173913 191 6 3 221 2L:104079-104166 7 Nhe1 FBtr0301452 103960 104472 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 104081 104130 3'utr Nhe1 FlyBase G4915.1 TTATTCATACGAATATATGCTGTATTTGTGATTTTATACATTTTTGAAAC 131 104105 0.595449411 9 123 1487 0.945355191 1.635986112 0.202185792 0.34351145 0.530054645 131 7 3 173 2L:104081-104130 7 155 19 FBgn0026787 273.9133333 13.01 19.93 0.565872417 11.91391238 7.777220271 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 10507952 10507959 - 2L_10507952_10507959_- 0.474136819 0.550158333 0.512147576 0.053755318 CG7384 FBtr0080135|FBtr0080135|FBtr0080135 10507857|10507857|10507857 10508086|10508086|10508086 2L - 10507919 10507969 3'utr CG7384 FlyBase G9821.1 CGTACAGAATCTGTGATAGTGCTAACCTGCAATGGCGTCCATAGCATAGTT 8 10507960 0.973488317 3 8 48 1 1.079181246 0.083333333 0.25 0.5 8 0 0 12 2L:10507919-10507969 8 CG7384 FBtr0080135|FBtr0080135|FBtr0080135 10507857|10507857|10507857 10508086|10508086|10508086 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 10507919 10507969 3'utr CG7384 FlyBase G7601.1 CGTACAGAATCTGTGATAGTGCTAACCTGCAATGGCGTCCATAGCATAGTT 6 10507937 0.869989424 2 4 38 0.666666667 0.77815125 0.333333333 0.5 0.666666667 6 3 0 6 2L:10507919-10507969 8 5.5 20 FBgn0032262 8.333333333 0.46 0.726666667 0.66 11.95652174 7.568807339 1 -22 -10.5 0.25 dme-miR-12-5p 7mer-A1 ATACTCA 2L 1051106 1051112 - 2L_1051106_1051112_- 0.816685709 0.823326908 0.820006309 0.004696038 S FBtr0077993 1049672 1052037 2L - 1051094 1051137 3'utr S FlyBase G6717.1 GCAAAATCTGCTTTCAACTCATCTCATACTCATAGTTACAACAT 16 1051111 0.743541404 5 15 139 0.941176471 1.204119983 0.235294118 0.0625 0.117647059 16 1 0 16 2L:1051094-1051137 7 S FBtr0077993 1049672 1052037 ATACTCA 7mer-A1 dme-miR-12-5p 2L - 1051099 1051138 3'utr S FlyBase G5253.1 TGCAAAATCTGCTTTCAACTCATCTCATACTCATAGTTAC 8 1051118 0.68791422 4 8 74 1 1.204119983 0 0.625 0.8125 8 0 0 16 2L:1051099-1051138 7 12 21 FBgn0003310 666.94 15.53666667 23.95 0.017992623 0.772366445 0.501043841 -1 6 2.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 10534 10540 - 2L_10534_10540_- 0.797777627 0.798356178 0.798066903 0.000409132 l(2)gl FBtr0078168|FBtr0078168|FBtr0078168|FBtr0306591|FBtr0306591|FBtr0306591|FBtr0078169|FBtr0078169|FBtr0078169|FBtr0078167|FBtr0078167|FBtr0078167|FBtr0306589|FBtr0306589|FBtr0306589|FBtr0306590|FBtr0306590|FBtr0306590|FBtr0078170|FBtr0078170|FBtr0078170|FBtr0330655|FBtr0330655|FBtr0330655|FBtr0078171|FBtr0078171|FBtr0078171|FBtr0306592|FBtr0306592|FBtr0306592|FBtr0078166|FBtr0078166|FBtr0078166 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11309|11309|11309|11214|11214|11214|11214|11214|11214|11214|11214|11214 2L - 10484 10562 3'utr l(2)gl FlyBase G6260.1 CTTTTATTTTCGGTTAAAATATTGTGATACAAAAAAATGCCCTTACAAAATTAGGACAACAACAATTTGCTTTATTATG 220 10541 0.852784174 12 203 1415 0.926199262 1.195553739 0.520295203 0.195454545 0.346863469 220 5 15 251 2L:10484-10562 7 l(2)gl FBtr0306592|FBtr0306592|FBtr0306592|FBtr0306590|FBtr0306590|FBtr0306590|FBtr0078166|FBtr0078166|FBtr0078166|FBtr0330655|FBtr0330655|FBtr0330655|FBtr0078171|FBtr0078171|FBtr0078171|FBtr0078169|FBtr0078169|FBtr0078169|FBtr0078167|FBtr0078167|FBtr0078167|FBtr0306589|FBtr0306589|FBtr0306589|FBtr0078170|FBtr0078170|FBtr0078170|FBtr0078168|FBtr0078168|FBtr0078168|FBtr0306591|FBtr0306591|FBtr0306591 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11214|11214|11214|11214|11214|11214|11309|11309|11309|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 10513 10561 3'utr l(2)gl FlyBase G4883.1 TTTTATTTTCGGTTAAAATATTGTGATACAAAAAAATGCCCTTACAAAA 112 10541 0.695107335 6 103 724 0.909090909 1.273001272 0.557575758 0.357142857 0.563636364 112 8 7 150 2L:10513-10561 7 154 22 FBgn0002121 6538.69 148.3266667 227.85 0.023552118 1.03824891 0.675883257 1 1 1 0.25 dme-miR-1003-3p 6mer2-7 TGTGAG 2L 10740454 10740459 + 2L_10740454_10740459_+ 0.842047577 0.805923862 0.82398572 0.025543313 CG12299 FBtr0080113 10740097 10740762 2L + 10740437 10740471 3'utr CG12299 FlyBase G3948.1 AAGATCAAAAGCGATTTTGTGAGCATTCCCAGTAC 9 10740453 0.674570334 2 9 62 1 1 0.1 0.111111111 0.2 9 0 0 10 2L:10740437-10740471 6 CG12299 FBtr0080113 10740097 10740762 TGTGAG 6mer2-7 dme-miR-1003-3p 2L + 10740431 10740469 3'utr CG12299 FlyBase G3121.1 AATCATAAGATCAAAAGCGATTTTGTGAGCATTCCCAGT 7 10740452 0.904794193 3 6 46 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 2L:10740431-10740469 6 8 23 FBgn0032295 396.6833333 14.49 22.2 0.02016722 0.5521049 0.36036036 1 2 1.5 0.25 dme-miR-33-5p 7mer-A1 AATGCAA 2L 1082999 1083005 + 2L_1082999_1083005_+ 0.632672363 0.461542818 0.547107591 0.121006901 Atg4a FBtr0332569|FBtr0077953 1082870|1082870 1085380|1083378 2L + 1082920 1083064 3'utr Atg4a FlyBase G955.1 AGCCCAGCCAGGCGAAAGTGGAGCACCCAATGAGGAGAAAGAGAGTGGGCCGGGAGGTCGAGCCCCTGCGGATGCTGCGAATGCAATAAACTAAGGCTAAAGTGCATAATTAGACGAGTGGTTGAGATTTAGATTTTAGTATGTT 70 1083011 0.962291889 14 68 345 0.975609756 1.602059991 0.268292683 0.157142857 0.280487805 70 1 1 80 2L:1082920-1083064 7 Atg4a FBtr0077953|FBtr0332569 1082870|1082870 1083378|1085380 AATGCAA 7mer-A1 dme-miR-33-5p 2L + 1082923 1083062 3'utr Atg4a FlyBase G769.1 CCAGCCAGGCGAAAGTGGAGCACCCAATGAGGAGAAAGAGAGTGGGCCGGGAGGTCGAGCCCCTGCGGATGCTGCGAATGCAATAAACTAAGGCTAAAGTGCATAATTAGACGAGTGGTTGAGATTTAGATTTTAGTATG 37 1083011 0.962104287 12 34 165 0.945454545 1.414973348 0.418181818 0.351351351 0.563636364 37 2 1 52 2L:1082923-1083062 7 34.5 24 FBgn0031298 484.5333333 26.74 40.88333333 0.071202532 1.290201945 0.843864656 -12 -12 -12 0.25 dme-miR-7-5p 7mer-m8 GTCTTCC 2L 10838165 10838171 - 2L_10838165_10838171_- 0.696020957 0.703437902 0.699729429 0.00524454 CG6700 FBtr0301710|FBtr0080187 10837858|10837730 10839315|10839315 2L - 10838145 10838225 3'utr CG6700 FlyBase G9859.1 CAAAATTATCGGAAGTTCAAACTCAACGTTTTGGAGTATGGCAAATTCAACCTGGTCTTCCCCGTCGCCACTAAACATCCG 14 10838168 0.695837135 6 13 83 0.875 1.146128036 0.0625 0.142857143 0.25 14 2 0 14 2L:10838145-10838225 7 CG6700 FBtr0301710|FBtr0080187 10837858|10837730 10839315|10839315 GTCTTCC 7mer-m8 dme-miR-7-5p 2L - 10838148 10838198 3'utr CG6700 FlyBase G7625.1 GTTTTGGAGTATGGCAAATTCAACCTGGTCTTCCCCGTCGCCACTAAACAT 8 10838168 0.977616939 2 8 61 1 1.041392685 0.090909091 0.25 0.454545455 8 0 0 11 2L:10838148-10838198 7 9 25 FBgn0032305 1004.78 26.73333333 40.84666667 0.008957185 0.336658354 0.220336217 -3 -3 -3 0.25 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 2L 10839257 10839264 - 2L_10839257_10839264_- 0.674859947 0.674850889 0.674855418 6.36E-06 CG6700 FBtr0301710|FBtr0080187 10837858|10837730 10839315|10839315 2L - 10839045 10839288 3'utr CG6700 FlyBase G9865.1 TGGCATGAAGCCCTATTCGATTTTGTACCTGATTTCCGAGCTTTTCGGATGTTAGTGTCCTTTTTCGGACTGCGGATGCAACTCTCTTGGCCCTGTTTAAAAATTTGTGTATATATTTCTCTAGATCGCGATTCCCTTTCGTTACAAAGTTAGGACTTGAATTACTCCCATTCTTAGGCTGAAGTCTTCGCTTATTTAGGACCAACTGTTCTTCGTAGGGTTTAAAGTTTTTAGATGGAAAATA 304 10839265 0.988364088 32 297 2794 0.980874317 2.254064453 0.163934426 0.174342105 0.31420765 304 6 1 359 2L:10839045-10839288 8 CG6700 FBtr0301710|FBtr0080187 10837858|10837730 10839315|10839315 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2L - 10839237 10839283 3'utr CG6700 FlyBase G7631.1 TGAAGCCCTATTCGATTTTGTACCTGATTTCCGAGCTTTTCGGATGT 116 10839265 0.699534517 11 113 1170 0.971428571 2.230448921 0.177142857 0.379310345 0.588571429 116 5 0 170 2L:10839237-10839283 8 137.5 26 FBgn0032305 1004.78 26.73333333 40.84666667 0.136845877 5.143391521 3.366247756 1 1 1 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA 2L 10847252 10847259 - 2L_10847252_10847259_- 0.596562184 0.601937991 0.599250087 0.003801265 porin FBtr0080183|FBtr0305260 10847225|10847225 10847867|10847867 2L - 10847237 10847272 3'utr porin FlyBase G9878.1 TACCTTTTCGTTGTGCATTTACCTGAGAAATAAATC 26 10847255 0.730343129 3 26 191 1 1.602059991 0.275 0.346153846 0.575 26 0 0 40 2L:10847237-10847272 8 porin FBtr0305260|FBtr0080183 10847225|10847225 10847867|10847867 TGCATTTA 8mer-A1 dme-miR-277-3p 2L - 10847242 10847278 3'utr porin FlyBase G7636.1 AATCTTTACCTTTTCGTTGTGCATTTACCTGAGAAAT 17 10847255 0.742718784 3 17 139 1 1.361727836 0.347826087 0.352941176 0.52173913 17 0 0 23 2L:10847242-10847278 8 21.5 27 FBgn0004363 5030.653333 426.6133333 653.96 0.004273799 0.050396925 0.032876629 -4 -4 -4 0.25 dme-miR-277-3p 6mer3-8 TGCATT 2L 10856854 10856859 - 2L_10856854_10856859_- 0.988008609 0.94745669 0.967732649 0.028674523 aurB FBtr0080180 10856795 10856872 2L - 10856827 10856865 3'utr aurB FlyBase G9895.1 CGAGTTTGCATTGTGTAACGACTTATTTCAGATTTTACT 15 10856852 0.681237911 6 14 134 0.944444444 1.230448921 0.833333333 0.133333333 0.277777778 15 1 0 17 2L:10856827-10856865 6 aurB FBtr0080180 10856795 10856872 TGCATT 6mer3-8 dme-miR-277-3p 2L - 10856828 10856864 3'utr aurB FlyBase G7648.1 GAGTTTGCATTGTGTAACGACTTATTTCAGATTTTAC 9 10856839 0.898906544 5 7 91 0.785714286 1.041392685 0.357142857 0.444444444 0.642857143 9 3 0 11 2L:10856828-10856864 6 9 28 FBgn0024227 390.6033333 40.1 60.70333333 0.023041278 0.224438903 0.148262039 -7 -20 -13.5 0.25 dme-miR-8-3p 6mer3-8 CAGTAT 2L 10982205 10982210 + 2L_10982205_10982210_+ 0.874861627 0.836797959 0.855829793 0.02691503 SCAR FBtr0305255|FBtr0329950|FBtr0305256|FBtr0329949|FBtr0340223 10981664|10981721|10981664|10981664|10981664 10982293|10982395|10982395|10982395|10982395 2L + 10982176 10982221 3'utr SCAR FlyBase G3989.1 ATTAAAATATATCGAACTCCGTAGCATTTCAGTATACTCAACAAGC 12 10982203 0.672943577 5 12 79 1 1.146128036 0.142857143 0.166666667 0.285714286 12 0 0 14 2L:10982176-10982221 6 SCAR FBtr0329949|FBtr0305255|FBtr0340223|FBtr0305256|FBtr0329950 10981664|10981664|10981664|10981664|10981721 10982395|10982293|10982395|10982395|10982395 CAGTAT 6mer3-8 dme-miR-8-3p 2L + 10982183 10982287 3'utr SCAR FlyBase G3149.1 TATATCGAACTCCGTAGCATTTCAGTATACTCAACAAGCTATGAAATTGTATTATCCTTGTGAAAGTTAAATACCTGTATAATTAATAAAATATGTTTCACGAAT 18 10982203 0.982929762 7 17 131 0.903225806 1.447158031 0 0.5 0.709677419 18 3 0 28 2L:10982183-10982287 6 11 29 FBgn0041781 1138.273333 48.57333333 74.31 0.00966376 0.226461707 0.148028529 2 2 2 0.25 dme-miR-8-3p 8mer-A1 CAGTATTA 2L 10989220 10989227 + 2L_10989220_10989227_+ 0.671271938 0.669783798 0.670527868 0.001052246 CG12253 FBtr0080149 10989166 10989241 2L + 10989204 10989232 3'utr CG12253 FlyBase G3994.1 TACAATTTGTAACTTTCAGTATTAAAATT 10 10989218 0.713310949 5 10 97 1 1.079181246 0 0.2 0.333333333 10 0 0 12 2L:10989204-10989232 8 CG12253 FBtr0080149 10989166 10989241 CAGTATTA 8mer-A1 dme-miR-8-3p 2L + 10989207 10989233 3'utr CG12253 FlyBase G3150.1 AATTTGTAACTTTCAGTATTAAAATTA 5 10989218 0.750055121 2 4 44 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2L:10989207-10989233 8 7.5 30 FBgn0026148 79.66666667 7.916666667 12.16 0.094142259 0.947368421 0.616776316 2 2 2 0.25 dme-miR-7-5p 8mer-A1 GTCTTCCA 2L 11013949 11013956 - 2L_11013949_11013956_- 0.67137092 0.675040575 0.673205748 0.00259487 Samuel FBtr0080161|FBtr0331197 11013204|11013204 11014199|11014199 2L - 11013943 11013978 3'utr Samuel FlyBase G9966.1 GAGAAACAACAATAATCGCAAAGTCTTCCATTTGCA 5 11013948 0.963936234 3 5 30 1 0.698970004 0.2 0 0 5 0 0 5 2L:11013943-11013978 8 Samuel FBtr0080161|FBtr0331197 11013204|11013204 11014199|11014199 GTCTTCCA 8mer-A1 dme-miR-7-5p 2L - 11013944 11013976 3'utr Samuel FlyBase G7699.1 GAAACAACAATAATCGCAAAGTCTTCCATTTGC 5 11013950 0.885494638 4 5 27 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 2L:11013944-11013976 8 5 31 FBgn0032330 367.82 9.873333333 15.09333333 0.013593606 0.506414585 0.331272085 -8 -6 -7 0.25 dme-miR-965-3p 6mer2-7 ACGCTT 2L 11095578 11095583 - 2L_11095578_11095583_- 0.999626375 0.980135909 0.989881142 0.013781865 Ge-1 FBtr0080232|FBtr0080231 11095148|11095351 11095687|11095687 2L - 11095563 11095603 3'utr Ge-1 FlyBase G9972.1 ACAAACACATTTATAAATACACGCTTGTAGTTAAGTCCAAA 9 11095586 0.849635666 3 8 73 0.888888889 0.903089987 0 0 0 9 1 0 8 2L:11095563-11095603 6 Ge-1 FBtr0080232|FBtr0080231 11095148|11095351 11095687|11095687 ACGCTT 6mer2-7 dme-miR-965-3p 2L - 11095520 11095601 3'utr Ge-1 FlyBase G7701.1 AAACACATTTATAAATACACGCTTGTAGTTAAGTCCAAAAAGAAGTTAGTATGCTAAAAAGCTCTCAGCTAAGTTCATCCCT 10 11095576 0.987074551 6 9 73 0.842105263 1.204119983 0 0.6 0.789473684 10 3 0 16 2L:11095520-11095601 6 8 32 FBgn0032340 1621.653333 39.62666667 60.70666667 0.004933237 0.201884253 0.131781243 3 -7 -2 0.25 dme-miR-965-3p 7mer-m8 TACGCTT 2L 11110556 11110562 + 2L_11110556_11110562_+ 0.612756885 0.608733139 0.610745012 0.002845256 l(2)gd1 FBtr0080197|FBtr0306138 11110434|11110434 11110851|11110851 2L + 11110512 11110605 3'utr l(2)gd1 FlyBase G4062.1 GTTTGTAAATATCCCTCACAGAAAATTCAATTTATCTAAGTATGTACGCTTTTGCCGATTCCTTCGCAGGAAGAAGGCATTTATATATTACGAA 155 11110563 0.989691289 10 145 1420 0.936507937 1.645913275 0.264550265 0.167741935 0.317460317 155 9 3 177 2L:11110512-11110605 7 l(2)gd1 FBtr0306138|FBtr0080197 11110434|11110434 11110851|11110851 TACGCTT 7mer-m8 dme-miR-965-3p 2L + 11110521 11110625 3'utr l(2)gd1 FlyBase G3192.1 TATCCCTCACAGAAAATTCAATTTATCTAAGTATGTACGCTTTTGCCGATTCCTTCGCAGGAAGAAGGCATTTATATATTACGAACACAACACATATAATGTACT 77 11110563 0.987945002 16 74 663 0.975 2.068185862 0.15 0.337662338 0.575 77 3 0 117 2L:11110521-11110625 7 104.5 33 FBgn0261983 621.6366667 24.99666667 38.09666667 0.168104627 4.180557408 2.743022137 -7 -7 -7 0.25 dme-miR-283-5p 7mer-m8 TGATATT 2L 11110662 11110668 + 2L_11110662_11110668_+ 0.620063352 0.567632755 0.593848053 0.037074033 l(2)gd1 FBtr0080197|FBtr0306138 11110434|11110434 11110851|11110851 2L + 11110653 11110715 3'utr l(2)gd1 FlyBase G4064.1 ATGTATATATGATATTGCCGGCGTTAAGGCGAAGGCGCAAGTCCAGAAGATTGTGCCGGTGAA 10 11110667 0.747844062 7 8 49 0.916666667 1.041392685 0.083333333 0.2 0.333333333 10 1 0 11 2L:11110653-11110715 7 l(2)gd1 FBtr0306138|FBtr0080197 11110434|11110434 11110851|11110851 TGATATT 7mer-m8 dme-miR-283-5p 2L + 11110651 11110719 3'utr l(2)gd1 FlyBase G3193.1 ATATGTATATATGATATTGCCGGCGTTAAGGCGAAGGCGCAAGTCCAGAAGATTGTGCCGGTGAAGTCA 8 11110676 0.886655924 6 8 31 1 1.079181246 0.166666667 0.25 0.5 8 0 0 12 2L:11110651-11110719 7 4.5 34 FBgn0261983 621.6366667 24.99666667 38.09666667 0.007238955 0.180024003 0.11812057 -5 -14 -9.5 0.25 dme-miR-79-3p 7mer-m8 TAGCTTT 2L 11110789 11110795 + 2L_11110789_11110795_+ 0.408967278 0.50338323 0.456175254 0.066762123 l(2)gd1 FBtr0080197|FBtr0306138 11110434|11110434 11110851|11110851 2L + 11110760 11110806 3'utr l(2)gd1 FlyBase G4065.1 ACTAGCGCCTAGCCGAAACCTGATTATGTTAGCTTTCACATTGCATA 15 11110787 0.741500413 4 14 119 0.875 1.146128036 0 0.066666667 0.125 15 2 0 14 2L:11110760-11110806 7 l(2)gd1 FBtr0306138|FBtr0080197 11110434|11110434 11110851|11110851 TAGCTTT 7mer-m8 dme-miR-79-3p 2L + 11110754 11110801 3'utr l(2)gd1 FlyBase G3194.1 CGGTCCACTAGCGCCTAGCCGAAACCTGATTATGTTAGCTTTCACATT 12 11110787 0.98590921 2 11 96 0.9375 1.176091259 0 0.333333333 0.5 12 1 0 15 2L:11110754-11110801 7 11 35 FBgn0261983 621.6366667 24.99666667 38.09666667 0.017695224 0.440058674 0.288739172 2 2 2 0.25 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 2L 11144 11149 - 2L_11144_11149_- 0.996248715 0.99870175 0.997475232 0.001734533 l(2)gl FBtr0078168|FBtr0306591|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0306590|FBtr0078170|FBtr0330655|FBtr0078171|FBtr0306592|FBtr0078166 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11214|11214|11214|11214|11309|11214|11214|11214 2L - 11126 11211 3'utr l(2)gl FlyBase G6264.1 TGACAGAAGCCGTAACCTACTAATTATTTTATACCTTTACAGAAATACGACGCAAACGAGTACTAGTCCTGATGTAATTTAATCTA 132 11150 0.942780601 10 126 653 0.956521739 1.710399466 0.167701863 0.174242424 0.322981366 132 5 2 154 2L:11126-11211 6 l(2)gl FBtr0306592|FBtr0306590|FBtr0078166|FBtr0330655|FBtr0078171|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0078170|FBtr0078168|FBtr0306591 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11309|11214|11214|11214|11214|11214|11214|11214 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 2L - 11075 11173 3'utr l(2)gl FlyBase G4888.1 ACAGAAATACGACGCAAACGAGTACTAGTCCTGATGTAATTTAATCTATAATTACAAACATGTCTCACTAAAAATCGAACGGGGACAGCAAAATAGGAA 109 11142 0.961532016 8 105 523 0.97752809 1.939519253 0.101123596 0.412844037 0.640449438 109 3 1 174 2L:11075-11173 6 115 36 FBgn0002121 6538.69 148.3266667 227.85 0.017587621 0.775315745 0.504718016 1 -7 -3 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 1114826 1114831 - 2L_1114826_1114831_- 0.965701164 0.989387135 0.977544149 0.016748461 Pino FBtr0077988|FBtr0077988|FBtr0077988|FBtr0332272|FBtr0332272|FBtr0332272|FBtr0077987|FBtr0077987|FBtr0077987 1114652|1114652|1114652|1114652|1114652|1114652|1114652|1114652|1114652 1115733|1115733|1115733|1115733|1115733|1115733|1115733|1115733|1115733 2L - 1114722 1114932 3'utr Pino FlyBase G6741.1 TCTCCAAGGGAAAAGTGAAAGCGCATAGAAATGAGCAATTAAGGATGTGAAAACACGCACAAGGAAACAATTGAAAAGCATTACTCAAAGTTGAAGATTTTCTGTGAAAATCCATATGACATGTAGAAGTTTATACCTAATATATACACCTATATATTATATACCACATAAATCTGCATACAATATACATAAATATATATATATTTTTAAT 160 1114833 0.982222612 24 151 1135 0.952380952 1.77815125 0.142857143 0.15625 0.285714286 160 7 2 180 2L:1114722-1114932 6 Pino FBtr0077988|FBtr0077988|FBtr0077988|FBtr0332272|FBtr0332272|FBtr0332272|FBtr0077987|FBtr0077987|FBtr0077987 1114652|1114652|1114652|1114652|1114652|1114652|1114652|1114652|1114652 1115733|1115733|1115733|1115733|1115733|1115733|1115733|1115733|1115733 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 1114781 1114967 3'utr Pino FlyBase G5268.1 AGTGCTCAACAAAGTAACTACAGGATTGAACAATTTCTCCAAGGGAAAAGTGAAAGCGCATAGAAATGAGCAATTAAGGATGTGAAAACACGCACAAGGAAACAATTGAAAAGCATTACTCAAAGTTGAAGATTTTCTGTGAAAATCCATATGACATGTAGAAGTTTATACCTAATATATACACCTA 87 1114834 0.984882169 26 77 623 0.888 1.142232992 0.112 0.356321839 0.552 87 7 7 111 2L:1114781-1114967 6 53 37 FBgn0016926 853.46 50.28 77.25 0.062100157 1.054097056 0.686084142 2 3 2.5 0.25 dme-miR-14-3p 7mer-m8 AAGACTG 2L 11180259 11180265 + 2L_11180259_11180265_+ 0.664249296 0.667213204 0.66573125 0.002095794 CG4788 FBtr0080202 11179989 11180430 2L + 11180237 11180278 3'utr CG4788 FlyBase G4104.1 ACATAGATGTTTTCAAACAATTAAGACTGGAAAAATACAAAA 11 11180257 0.95103807 2 10 47 1 1.146128036 0.071428571 0.090909091 0.285714286 11 0 0 14 2L:11180237-11180278 7 CG4788 FBtr0080202 11179989 11180430 AAGACTG 7mer-m8 dme-miR-14-3p 2L + 11180239 11180272 3'utr CG4788 FlyBase G3217.1 ATAGATGTTTTCAAACAATTAAGACTGGAAAAAT 9 11180257 0.808056068 3 7 55 0.8 0.903089987 0 0.111111111 0.2 9 2 0 8 2L:11180239-11180272 7 9.5 38 FBgn0032354 97.66666667 9.44 14.38333333 0.097269625 1.006355932 0.660486674 2 2 2 0.25 dme-miR-14-3p 8mer-A1 AAGACTGA 2L 11277478 11277485 + 2L_11277478_11277485_+ 0.529371558 0.471542767 0.500457162 0.040891137 cana FBtr0344017|FBtr0091678|FBtr0344016 11277334|11277334|11277334 11277846|11277846|11277846 2L + 11277439 11277526 intron-3'utr cana FlyBase G4113.1 AGGTGGCAATTGCCACTGCGAGCAGCGGAGCTGCAAACAAAGACTGAGTTCGGACTGGAGGCAAAACGTTGAGTTCAACGATGATAAA 54 11277493 0.945825481 7 48 189 0.916666667 1.439332694 0.316666667 0.092592593 0.183333333 54 4 1 55 2L:11277439-11277526 8 cana FBtr0344017|FBtr0091678|FBtr0344016 11277334|11277334|11277334 11277846|11277846|11277846 AAGACTGA 8mer-A1 dme-miR-14-3p 2L + 11277448 11277521 3'utr cana FlyBase G3221.1 TTGCCACTGCGAGCAGCGGAGCTGCAAACAAAGACTGAGTTCGGACTGGAGGCAAAACGTTGAGTTCAACGATG 37 11277488 0.942388917 6 32 128 0.915254237 1.130333768 0.576271186 0.378378378 0.610169492 37 2 3 54 2L:11277448-11277521 8 35.5 39 FBgn0040233 712.72 14.75333333 22.66 0.049809182 2.406235879 1.566637246 -15 -10 -12.5 0.25 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 11281713 11281719 + 2L_11281713_11281719_+ 0.694447663 0.767743584 0.731095624 0.051828028 Ppt2 FBtr0080212 11281669 11281920 2L + 11281593 11281750 stop_codon Ppt2 FlyBase G4121.1 AAACCCCATGTTCATCATCTTGCCTGGCACACGCGAAGGGATGTCATCCACGAAGTGATATTTCCATATCTGGACTGAATAAGAAACCAAAACTACTGAACTATACTGAGCGATCAAACGGCTGTGATCGGAAAGGCGGACAAAGGCTCACTCTCATC 86 11281698 0.969928004 18 70 398 0.83 1.317018101 0.25 0.127906977 0.25 86 14 3 83 2L:11281593-11281750 7 Ppt2 FBtr0080212 11281669 11281920 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L + 11281589 11281749 stop_codon Ppt2 FlyBase G3230.1 GGTCAAACCCCATGTTCATCATCTTGCCTGGCACACGCGAAGGGATGTCATCCACGAAGTGATATTTCCATATCTGGACTGAATAAGAAACCAAAACTACTGAACTATACTGAGCGATCAAACGGCTGTGATCGGAAAGGCGGACAAAGGCTCACTCTCAT 57 11281698 0.975088893 16 45 279 0.822222222 1.392110465 0.255555556 0.368421053 0.6 57 14 2 74 2L:11281589-11281749 7 36.5 40 FBgn0032358 64.33333333 6.69 10.29333333 0.567357513 5.455904335 3.545984456 15 15 15 0.25 dme-miR-1008-3p 6mer2-7 GCTGTG 2L 113734 113739 + 2L_113734_113739_+ 0.9802888 0.97352833 0.976908565 0.004780395 Sam-S FBtr0330656|FBtr0089429|FBtr0089431|FBtr0089430|FBtr0089436|FBtr0089434|FBtr0089435|FBtr0089437|FBtr0089432|FBtr0089428|FBtr0089433 112780|113541|113541|113541|113541|113541|113541|113541|113541|112740|113541 114432|114432|114432|114432|114210|114432|114432|114432|114210|114210|114432 2L + 113694 113904 3'utr Sam-S FlyBase G461.2 TAGGCTTGCCAACTCTTATGGGCTTTCTTCTCTAACTTATGCTGTGCTCTTCGCTATATAATTTAAACCATTCTGATGTGTGTAGTCTTCTCACACGGAACTAGTTTTAGTCGTCTTAATACCCGCATATATACCTAATAGAGAGCTCCAAAAGAATTGATGAGCTTTAGTTATGCATATACATAGTATAGTGTCGGTCAGTTCAGTAAAA 148 113733 0.951739125 30 141 1345 0.947674419 1.610127613 0.13372093 0.162162162 0.279069767 148 6 3 163 2L:113694-113904 6 Sam-S FBtr0089433|FBtr0089432|FBtr0089428|FBtr0089437|FBtr0089435|FBtr0089434|FBtr0089436|FBtr0089430|FBtr0089431|FBtr0089429|FBtr0330656 113541|113541|112740|113541|113541|113541|113541|113541|113541|113541|112780 114432|114210|114210|114432|114432|114432|114210|114432|114432|114432|114432 GCTGTG 6mer2-7 dme-miR-1008-3p 2L + 113675 113877 3'utr Sam-S FlyBase G387.2 GTCAGAGGAGAAGGCGGCATAGGCTTGCCAACTCTTATGGGCTTTCTTCTCTAACTTATGCTGTGCTCTTCGCTATATAATTTAAACCATTCTGATGTGTGTAGTCTTCTCACACGGAACTAGTTTTAGTCGTCTTAATACCCGCATATATACCTAATAGAGAGCTCCAAAAGAATTGATGAGCTTTAGTTATGCATATACAT 79 113733 0.939056871 21 71 694 0.896551724 1.716003344 0.137931034 0.316455696 0.534482759 79 11 1 104 2L:113675-113877 6 45 41 FBgn0005278 1886.66 102.5866667 157.21 0.023851674 0.438653496 0.286241333 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 11510219 11510226 - 2L_11510219_11510226_- 0.650171149 0.449919977 0.550045563 0.141598911 CG6509 FBtr0336630|FBtr0336630|FBtr0336630 11508397|11508397|11508397 11511170|11511170|11511170 2L - 11510184 11510250 5'utr CG6509 FlyBase G10068.1 ACTGCGTTCGGGTGAGGTGGTCGACTGTGATACGGGAACGGCCAGACGCGGCAGCACTTCGGCCAGA 6 11510233 0.979863718 4 4 27 0.714285714 0.698970004 0.428571429 0.166666667 0.285714286 6 2 0 5 2L:11510184-11510250 8 CG6509 FBtr0336630|FBtr0336630|FBtr0336630 11508397|11508397|11508397 11511170|11511170|11511170 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 11510210 11510245 5'utr CG6509 FlyBase G7759.1 GTTCGGGTGAGGTGGTCGACTGTGATACGGGAACGG 5 11510230 0.86229746 3 5 27 1 0.954242509 0.666666667 0.6 0.777777778 5 0 0 9 2L:11510210-11510245 8 4 42 FBgn0032363 893.76 15.01 22.98666667 0.004475474 0.266489007 0.174013921 7 4 5.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 11523071 11523077 - 2L_11523071_11523077_- 0.716293002 0.652777048 0.684535025 0.044912594 CG31705 FBtr0345719|FBtr0345719|FBtr0345719 11523019|11523019|11523019 11523549|11523549|11523549 2L - 11523054 11523094 3'utr CG31705 FlyBase G10102.1 CAGACCACTATAACATTTGTGATACAATAACAATTGGAAAA 11 11523079 0.970156949 3 11 79 1 1.041392685 0 0 0 11 0 0 11 2L:11523054-11523094 7 CG31705 FBtr0345719|FBtr0345719|FBtr0345719 11523019|11523019|11523019 11523549|11523549|11523549 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 11523064 11523093 3'utr CG31705 FlyBase G7779.1 AGACCACTATAACATTTGTGATACAATAAC 9 11523079 0.715347665 2 9 60 1 1.230448921 0 0.444444444 0.705882353 9 0 0 17 2L:11523064-11523093 7 10 43 FBgn0028490 1886.113333 87.62 132.81 0.005301908 0.114129194 0.075295535 2 2 2 0.25 dme-miR-14-3p 7mer-m8 AAGACTG 2L 1166384 1166390 + 2L_1166384_1166390_+ 0.671670648 0.670559634 0.671115141 0.000785596 IntS14 FBtr0077962 1166360 1166425 2L + 1166372 1166405 3'utr IntS14 FlyBase G990.1 TGTCCTTACTTTAAGACTGTGTTTACTTTGTAAT 6 1166381 0.895502368 5 6 63 1 0.903089987 0 0.166666667 0.375 6 0 0 8 2L:1166372-1166405 7 IntS14 FBtr0077962 1166360 1166425 AAGACTG 7mer-m8 dme-miR-14-3p 2L + 1166367 1166408 3'utr IntS14 FlyBase G793.1 TTTTATGTCCTTACTTTAAGACTGTGTTTACTTTGTAATACA 7 1166391 0.987049466 4 7 78 1 1.176091259 0 0.571428571 0.8 7 0 0 15 2L:1166367-1166408 7 6.5 44 FBgn0031314 268.3333333 16.95333333 25.93333333 0.024223602 0.383405427 0.250642674 3 -7 -2 0.25 dme-miR-980-3p 7mer-A1 GCAGCTA 2L 11796912 11796918 - 2L_11796912_11796918_- 0.727594167 0.578059234 0.6528267 0.105737213 crol FBtr0335474|FBtr0080262|FBtr0335475|FBtr0080263|FBtr0305262|FBtr0080261|FBtr0335473|FBtr0335476|FBtr0080260 11794325|11795170|11794325|11795170|11795170|11795494|11794325|11795167|11794325 11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124 2L - 11796907 11797013 3'utr crol FlyBase G10122.2 AGGCATGCGTGCCACCAGTGAGCCAGTGCTAGTGAGCCGAGCTGACGCGACTTCTCTAGATAGGACACACATCATAACAAGCGCACCCCATATAAGCAGCTAGTTGT 119 11796921 0.855509757 14 115 513 0.964285714 1.528273777 0.3 0.176470588 0.3 119 2 3 135 2L:11796907-11797013 7 crol FBtr0305262|FBtr0335473|FBtr0080261|FBtr0335476|FBtr0080260|FBtr0335474|FBtr0080262|FBtr0335475|FBtr0080263 11795170|11794325|11795494|11795167|11794325|11794325|11795170|11794325|11795170 11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124|11797124 GCAGCTA 7mer-A1 dme-miR-980-3p 2L - 11796821 11797006 3'utr crol FlyBase G7807.1 CGTGCCACCAGTGAGCCAGTGCTAGTGAGCCGAGCTGACGCGACTTCTCTAGATAGGACACACATCATAACAAGCGCACCCCATATAAGCAGCTAGTTGTATGTACAATAGTTTTAGCAGCGCGCTGGTTACGCTGATCGGTGGCCCCAAGCGGATATCGTGATACGCTGGGTTTCTAGGGTGTGT 126 11796921 0.844030463 28 112 658 0.880208333 1.324796718 0.276041667 0.365079365 0.583333333 126 16 7 169 2L:11796821-11797006 7 30 45 FBgn0020309 6740.04 140.5266667 216.61 0.004451012 0.213482613 0.138497761 3 3 3 0.25 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 11810369 11810376 - 2L_11810369_11810376_- 0.623551873 0.622900968 0.62322642 0.000460256 CycY FBtr0333425 11810090 11811116 2L - 11810365 11810420 3'utr CycY FlyBase G10151.1 AATAACTCAATATGATTTCGTGTGATTCTTATATAGTTTCCATTTAGCTTTATATA 20 11810377 0.820306031 5 20 206 1 1.380211242 0.083333333 0.15 0.291666667 20 0 0 24 2L:11810365-11810420 8 CycY FBtr0333425 11810090 11811116 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 11810365 11810420 3'utr CycY FlyBase G7830.1 AATAACTCAATATGATTTCGTGTGATTCTTATATAGTTTCCATTTAGCTTTATATA 25 11810377 0.779495814 6 25 256 1 1.491361694 0.064516129 0.2 0.35483871 25 0 0 31 2L:11810365-11810420 8 14 46 FBgn0032378 829.4 43.03666667 66.07 0.016879672 0.325304004 0.211896473 1 1 1 0.25 dme-miR-31a-5p 6mer2-7 CTTGCC 2L 1181655 1181660 + 2L_1181655_1181660_+ 0.575942075 0.849375323 0.712658699 0.19334647 CG4896 FBtr0335394|FBtr0335395|FBtr0308698 1179902|1179230|1179230 1182454|1182454|1182454 2L + 1181586 1181662 3'utr CG4896 FlyBase G1009.1 TTGAAGCTAGCGTTGGGACTAAACGAGCCATTAGCGATGAATCTGACTACGTGGACTTCCAAAAACTTACTTGCCTG 14 1181639 0.799321 10 12 69 0.888888889 1.204119983 0.277777778 0.285714286 0.444444444 14 2 0 16 2L:1181586-1181662 6 CG4896 FBtr0308698|FBtr0335394|FBtr0335395 1179230|1179902|1179230 1182454|1182454|1182454 CTTGCC 6mer2-7 dme-miR-31a-5p 2L + 1181627 1181672 3'utr CG4896 FlyBase G803.1 TCTGACTACGTGGACTTCCAAAAACTTACTTGCCTGCTCTGCATGC 8 1181654 0.755305304 5 7 48 0.846153846 1.041392685 0 0.375 0.615384615 8 2 0 11 2L:1181627-1181672 6 5.5 47 FBgn0031319 314.3566667 11.06666667 17.08 0.01749605 0.496987952 0.322014052 16 1 8.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 118176 118182 - 2L_118176_118182_- 0.489203776 0.494433829 0.491818802 0.003698168 CG4822 FBtr0100309|FBtr0100309|FBtr0100309|FBtr0100310|FBtr0100310|FBtr0100310|FBtr0330646|FBtr0330646|FBtr0330646 117077|117077|117077|117172|117172|117172|117077|117077|117077 119269|119269|119269|119426|119426|119426|119201|119201|119201 2L - 118136 118303 3'utr CG4822 FlyBase G6311.1 CGTACATCAAGCTTAAGTTCTACATGAACATCGTTCTTGCTTTACTGGTGGGTTCGCTCTACTTTGGTATGGGAACCTCGGCCTCTAAAGCGCTTTTTAACTTCGGTTTCATGTTCACCATTGTGATAGCATACCTCTACCTTCCTATGATGCCTGTGCTCTTATATT 677 118183 0.799572564 41 607 5604 0.90295858 1.174954362 0.146745562 0.209748892 0.366863905 677 32 50 763 2L:118136-118303 7 CG4822 FBtr0100310|FBtr0100310|FBtr0100310|FBtr0330646|FBtr0330646|FBtr0330646|FBtr0100309|FBtr0100309|FBtr0100309 117172|117172|117172|117077|117077|117077|117077|117077|117077 119426|119426|119426|119201|119201|119201|119269|119269|119269 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 118136 118245 3'utr CG4822 FlyBase G4927.1 CTACTTTGGTATGGGAACCTCGGCCTCTAAAGCGCTTTTTAACTTCGGTTTCATGTTCACCATTGTGATAGCATACCTCTACCTTCCTATGATGCCTGTGCTCTTATATT 400 118183 0.793520742 26 359 3210 0.904040404 1.252853031 0.131313131 0.3625 0.570707071 400 28 29 537 2L:118136-118245 7 441 48 FBgn0031220 2984.836667 134.1266667 204.7566667 0.147746778 3.287936776 2.153776027 1 1 1 0.25 dme-miR-276a-3p 8mer-A1 AGTTCCTA 2L 11827385 11827392 - 2L_11827385_11827392_- 0.637856689 0.62162279 0.629739739 0.011479101 esc FBtr0080325 11827202 11827459 2L - 11827335 11827448 5'utr esc FlyBase G10163.1 GGCGCAACCACAAACCAAATCTCACGTGGCCAAAACTTACAACATTTCCCTCAATTAGTTCCTAGTTGGTTAGCATTAAGATATAGAATTACGCTCCTGTGCTGTTCCAAATTA 83 11827403 0.988596207 15 76 710 0.911111111 1.612783857 0.044444444 0.084337349 0.155555556 83 7 1 82 2L:11827335-11827448 8 esc FBtr0080325 11827202 11827459 AGTTCCTA 8mer-A1 dme-miR-276a-3p 2L - 11827336 11827422 5'utr esc FlyBase G7840.1 TGGCCAAAACTTACAACATTTCCCTCAATTAGTTCCTAGTTGGTTAGCATTAAGATATAGAATTACGCTCCTGTGCTGTTCCAAATT 49 11827403 0.769280404 7 42 388 0.869565217 1.477121255 0.043478261 0.326530612 0.52173913 49 8 1 60 2L:11827336-11827422 8 34 49 FBgn0000588 215.62 15.44 23.56 0.157684816 2.202072539 1.443123939 11 11 11 0.25 dme-bantam-3p 6mer3-8 TGATCT 2L 118798 118803 - 2L_118798_118803_- 0.973964757 0.717109682 0.845537219 0.181623983 CG4822 FBtr0100309|FBtr0100310|FBtr0330646 117077|117172|117077 119269|119426|119201 2L - 118514 118873 3'utr CG4822 FlyBase G6313.1 GGTTTAGACGATTTATCGAGTTCACAATGCATTGCCCTACTCAAAGTTTTGGCCGCCGGGGGGCGCACTGTGATCTGCTCCATCCATACGCCATCTGCCAAGATCTTCGAGATGCTCGATGCAGTCTACGTTCTAGCCGAAGGCCAGTGCGTCTACCAAGGAAAGGGGTCCAACATTGTACCTTTCTTGAAGAACTTTGGGCTTTGTTGTCCAATAACCTACAACCCGGCTGACTTCATTATCGAAGTTGCTTGCCTTGAGTATGGCGGGTCCTATCACGAGCCAATGGTAGAAGCCGTGGGCAACGGCAAAGTTGCGCGATGGAGTCCTCCAGCAGTGGAAGGTGAAACAACAACAACC 356 118798 0.969903548 64 339 2197 0.956416465 1.897627091 0.341404358 0.137640449 0.256658596 356 14 4 395 2L:118514-118873 6 CG4822 FBtr0100310|FBtr0330646|FBtr0100309 117172|117077|117077 119426|119201|119269 TGATCT 6mer3-8 dme-bantam-3p 2L - 118491 118868 3'utr CG4822 FlyBase G4930.1 AGACGATTTATCGAGTTCACAATGCATTGCCCTACTCAAAGTTTTGGCCGCCGGGGGGCGCACTGTGATCTGCTCCATCCATACGCCATCTGCCAAGATCTTCGAGATGCTCGATGCAGTCTACGTTCTAGCCGAAGGCCAGTGCGTCTACCAAGGAAAGGGGTCCAACATTGTACCTTTCTTGAAGAACTTTGGGCTTTGTTGTCCAATAACCTACAACCCGGCTGACTTCATTATCGAAGTTGCTTGCCTTGAGTATGGCGGGTCCTATCACGAGCCAATGGTAGAAGCCGTGGGCAACGGCAAAGTTGCGCGATGGAGTCCTCCAGCAGTGGAAGGTGAAACAACAACAACCAAAACCGACACCACATCGGGGGC 243 118798 0.975629668 54 233 1471 0.948275862 2.51851394 0.353448276 0.341563786 0.540229885 243 18 0 330 2L:118491-118868 6 110.5 50 FBgn0031220 2984.836667 134.1266667 204.7566667 0.037020451 0.823848104 0.539664968 -5 -5 -5 0.25 dme-miR-278-3p 6mer3-8 CCCACC 2L 118958 118963 - 2L_118958_118963_- 0.40703898 0.488427192 0.447733086 0.057550148 CG4822 FBtr0100309|FBtr0100310|FBtr0330646 117077|117172|117077 119269|119426|119201 2L - 118935 119065 3'utr CG4822 FlyBase G6314.1 TTTGGGAATGTTGCGCCTAAAAGACACCCTAAACACCATGGCTCAAAAGCTATCTGGGGGTGAGCGAAAGCGTTTATGCATTGCCCTTGAGCTGGTCAACAACCCACCTGTCATCTTTCTAGATGAACCTA 50 118984 0.748559659 20 49 277 0.984375 1.799340549 0.125 0.26 0.421875 50 1 0 63 2L:118935-119065 6 CG4822 FBtr0100310|FBtr0330646|FBtr0100309 117172|117077|117077 119426|119201|119269 CCCACC 6mer3-8 dme-miR-278-3p 2L - 118932 119066 3'utr CG4822 FlyBase G4931.1 TTTTGGGAATGTTGCGCCTAAAAGACACCCTAAACACCATGGCTCAAAAGCTATCTGGGGGTGAGCGAAAGCGTTTATGCATTGCCCTTGAGCTGGTCAACAACCCACCTGTCATCTTTCTAGATGAACCTACAA 50 118956 0.745907414 20 48 271 0.947368421 1.857332496 0.065789474 0.42 0.618421053 50 4 0 72 2L:118932-119066 6 18.5 51 FBgn0031220 2984.836667 134.1266667 204.7566667 0.006197994 0.137929321 0.090351149 21 -7 7 0.25 dme-miR-14-3p 7mer-A1 AGACTGA 2L 119231 119237 - 2L_119231_119237_- 0.785438088 0.795308767 0.790373427 0.006979639 CG4822 FBtr0100309 117077 119269 2L - 119140 119282 lincRNA_intron-lincRNA_exon CG4822 FlyBase G6315.1 AGTGGATTACTGAATTGCGTTCCCATAAATATTGGTGTAATTCATAGACTGATGTCCTGGACTCACAGTTTACCGTACTAGAAATGATGATTTTGGCGGCAAACTTGAAGTTGGGAAAAGAACTAAATTTAAAACAAAAGCTA 189 119238 0.984613655 23 179 1440 0.947136564 1.48734042 0.348017621 0.169312169 0.308370044 189 6 6 215 2L:119140-119282 7 CG4822 FBtr0100309 117077 119269 AGACTGA 7mer-A1 dme-miR-14-3p 2L - 119140 119255 3'utr CG4822 FlyBase G4932.1 AATATTGGTGTAATTCATAGACTGATGTCCTGGACTCACAGTTTACCGTACTAGAAATGATGATTTTGGCGGCAAACTTGAAGTTGGGAAAAGAACTAAATTTAAAACAAAAGCTA 131 119238 0.921793217 20 123 950 0.921658986 1.397940009 0.313364055 0.419847328 0.649769585 131 10 7 200 2L:119140-119255 7 114.5 52 FBgn0031220 2984.836667 134.1266667 204.7566667 0.038360558 0.85367066 0.559200352 1 1 1 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 2L 11985976 11985982 - 2L_11985976_11985982_- 0.512413793 0.458023526 0.48521866 0.03845975 CG6686 FBtr0301171 11984325 11987330 2L - 11985857 11986018 5'utr CG6686 FlyBase G10176.1 TGAAATGGAAGGTCAGCCGAAAAAGCGCAAGAACTTTGTGATTGGTGAGAATATGGATGAGGAGCGGGAGCACAGACGCAAGCTCCTGGAGATTAAGACCAAATTAGCCGGCAAGCGTTTGGAAACCTTGGAGGACACCAATCTGCAGCTAGCATCGGACAC 302 11985976 0.765601636 18 295 1655 0.979591837 2.049218023 0.131195335 0.11589404 0.221574344 302 5 2 336 2L:11985857-11986018 7 CG6686 FBtr0301171 11984325 11987330 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 11985896 11986011 5'utr CG6686 FlyBase G7852.1 GAAGGTCAGCCGAAAAAGCGCAAGAACTTTGTGATTGGTGAGAATATGGATGAGGAGCGGGAGCACAGACGCAAGCTCCTGGAGATTAAGACCAAATTAGCCGGCAAGCGTTTGGA 181 11985976 0.969730041 13 178 1007 0.988847584 2.123851641 0.130111524 0.342541436 0.557620818 181 2 1 266 2L:11985896-11986011 7 183 53 FBgn0032388 1118.523333 42.80333333 65.72 0.163608567 4.275367962 2.784540475 -6 -6 -6 0.25 dme-miR-1006-3p 6mer2-7 GAATTT 2L 11996408 11996413 + 2L_11996408_11996413_+ 0.985939389 0.990255141 0.988097265 0.003051661 Qtzl FBtr0080288|FBtr0339524 11996242|11996242 11996469|11996723 2L + 11996377 11996451 3'utr Qtzl FlyBase G4156.1 GTCAATTAGGATGAGTGTTTCTAGGCTAAAAGAATTTTCCTTATCCTTCTAAATCCGATACCATATTTATGTAAC 15 11996430 0.956330228 11 14 152 0.882352941 1.176091259 0.058823529 0.133333333 0.235294118 15 2 0 15 2L:11996377-11996451 6 Qtzl FBtr0080288|FBtr0339524 11996242|11996242 11996469|11996723 GAATTT 6mer2-7 dme-miR-1006-3p 2L + 11996382 11996446 3'utr Qtzl FlyBase G3261.1 TTAGGATGAGTGTTTCTAGGCTAAAAGAATTTTCCTTATCCTTCTAAATCCGATACCATATTTAT 19 11996412 0.723687559 11 16 173 0.740740741 1.301029996 0 0.263157895 0.481481481 19 7 0 20 2L:11996382-11996446 6 11 54 FBgn0051864 168.2133333 28.36333333 43.04666667 0.065393152 0.387824656 0.255536627 -22 -4 -13 0.25 dme-miR-79-3p 6mer3-8 TAGCTT 2L 12045461 12045466 - 2L_12045461_12045466_- 0.911064497 0.793806868 0.852435682 0.082913644 CG6770 FBtr0080306 12045341 12045765 2L - 12045405 12045488 3'utr CG6770 FlyBase G10210.1 AAAGAAAGGCACATACTACTCTTAGCTTCTAATATATTCCTAAACTAATTCAGACTTGCAAGTTTTAGTTGCTAAGCCTTAGAG 55 12045467 0.907090788 16 54 414 0.985714286 1.537819095 0.085714286 0.218181818 0.385714286 55 0 1 69 2L:12045405-12045488 6 CG6770 FBtr0080306 12045341 12045765 TAGCTT 6mer3-8 dme-miR-79-3p 2L - 12045410 12045488 3'utr CG6770 FlyBase G7875.2 AAAGAAAGGCACATACTACTCTTAGCTTCTAATATATTCCTAAACTAATTCAGACTTGCAAGTTTTAGTTGCTAAGCCT 35 12045467 0.932264527 12 33 278 0.888888889 1.204119983 0.037037037 0.371428571 0.592592593 35 4 2 48 2L:12045410-12045488 6 26 55 FBgn0032400 867.8766667 144.29 222.0833333 0.029958174 0.180192668 0.117073171 1 1 1 0.25 dme-miR-1006-3p 8mer-A1 CGAATTTA 2L 12045681 12045688 - 2L_12045681_12045688_- 0.668842119 0.669431433 0.669136776 0.000416698 CG6770 FBtr0080306 12045341 12045765 2L - 12045668 12045787 stop_codon CG6770 FlyBase G10211.2 AGCCGCCGCCTGCAAGAACTGATGCAGGGCATCGACGGAGGCGGTGGAACAGGAGAGAAAGAAGTAACGGGGCCGCGCTGAAAGGAGAAAAGAAATCTTCGAATTTAAAAGGAAAGCAAA 122 12045689 0.979955211 8 116 547 0.951048951 2.133538908 0.181818182 0.163934426 0.286713287 122 7 0 136 2L:12045668-12045787 8 CG6770 FBtr0080306 12045341 12045765 CGAATTTA 8mer-A1 dme-miR-1006-3p 2L - 12045670 12045740 3'utr CG6770 FlyBase G7878.1 AACAGGAGAGAAAGAAGTAACGGGGCCGCGCTGAAAGGAGAAAAGAAATCTTCGAATTTAAAAGGAAAGCA 67 12045689 0.959389796 5 65 316 0.97826087 1.954242509 0.097826087 0.268656716 0.467391304 67 2 0 90 2L:12045670-12045740 8 84.5 56 FBgn0032400 867.8766667 144.29 222.0833333 0.097364065 0.58562617 0.380487805 1 1 1 0.25 dme-bantam-3p 7mer-m8 TGATCTC 2L 12100792 12100798 - 2L_12100792_12100798_- 0.657857083 0.661399683 0.659628383 0.002504996 Patsas FBtr0080362 12100763 12101247 2L - 12100777 12100819 3'utr Patsas FlyBase G10238.1 TGTATAAAATGTGTTATTTAATGATCTCTATATATTATATACC 15 12100798 0.929621022 6 13 180 0.894736842 1.230448921 0.684210526 0.266666667 0.421052632 15 2 0 17 2L:12100777-12100819 7 Patsas FBtr0080362 12100763 12101247 TGATCTC 7mer-m8 dme-bantam-3p 2L - 12100782 12100818 3'utr Patsas FlyBase G7899.1 GTATAAAATGTGTTATTTAATGATCTCTATATATTAT 10 12100791 0.887344079 5 9 113 0.933333333 1.146128036 0.6 0.4 0.6 10 1 0 14 2L:12100782-12100818 7 12.5 57 FBgn0029137 12.51333333 0.613333333 0.946666667 0.99893447 20.38043478 13.20422535 0 -7 -3.5 0.25 dme-miR-970-3p 8mer-A1 TCTTATGA 2L 12107479 12107486 - 2L_12107479_12107486_- 0.566502534 0.630789126 0.59864583 0.045457491 Rab6 FBtr0346437|FBtr0080361 12107219|12107285 12108172|12108172 2L - 12107475 12107540 3'utr Rab6 FlyBase G10239.1 GCGAACGCGACTGCTAACTGGAACTGTGGATGGCATAGGACTTGGCCACGTGCATCTTATGAATAA 10 12107498 0.938815867 6 9 54 0.9 0.954242509 0.4 0 0 10 1 0 9 2L:12107475-12107540 8 Rab6 FBtr0346437|FBtr0080361 12107219|12107285 12108172|12108172 TCTTATGA 8mer-A1 dme-miR-970-3p 2L - 12107470 12107548 3'utr Rab6 FlyBase G7901.1 TTAGCACAGCGAACGCGACTGCTAACTGGAACTGTGGATGGCATAGGACTTGGCCACGTGCATCTTATGAATAAATATA 10 12107516 0.963745132 8 10 55 1 1.079181246 0.083333333 0.2 0.333333333 10 0 0 12 2L:12107470-12107548 8 3 58 FBgn0015797 1477.666667 97.91333333 149.3266667 0.002030228 0.030639341 0.020090183 12 30 21 0.25 dme-miR-317-3p 8mer-A1 TGTGTTCA 2L 12107651 12107658 - 2L_12107651_12107658_- 0.629459479 0.629385027 0.629422253 5.27E-05 Rab6 FBtr0346437|FBtr0080361 12107219|12107285 12108172|12108172 2L - 12107636 12107688 3'utr Rab6 FlyBase G10240.1 CCAGCAGTCGTAGATACCACGCAGCCAGTCTGTGTTCAATGATTCCACCAGCC 63 12107659 0.828854345 9 58 416 0.943661972 1.826074803 0.183098592 0.111111111 0.211267606 63 4 0 67 2L:12107636-12107688 8 Rab6 FBtr0346437|FBtr0080361 12107219|12107285 12108172|12108172 TGTGTTCA 8mer-A1 dme-miR-317-3p 2L - 12107626 12107690 3'utr Rab6 FlyBase G7902.1 CTCCAGCAGTCGTAGATACCACGCAGCCAGTCTGTGTTCAATGATTCCACCAGCCAGGCATTTTG 26 12107659 0.97817345 8 24 159 0.941176471 1.505149978 0.205882353 0.269230769 0.441176471 26 2 0 32 2L:12107626-12107690 8 38 59 FBgn0015797 1477.666667 97.91333333 149.3266667 0.025716219 0.388098318 0.254475646 1 1 1 0.25 dme-miR-184-3p 8mer-A1 TCCGTCCA 2L 12173897 12173904 + 2L_12173897_12173904_+ 0.630398178 0.630407062 0.63040262 6.29E-06 crok FBtr0080342 12173602 12174091 2L + 12173829 12173970 3'utr crok FlyBase G4207.1 GAGCGATGTGTAATCAAGTGCCTTTTCTGTAACGGACTCGTATTGTAACTTAAGCCTGGAATACTATTTCCGTCCAAAAAATATCTTACGCCTATGACATTCCATCTCGTAAACTGAATCTTGTAATACTTTCTATTTTCTA 765 12173896 0.979153126 20 743 5110 0.973952435 2.633468456 0.005662514 0.130718954 0.246885617 765 22 1 860 2L:12173829-12173970 8 crok FBtr0080342 12173602 12174091 TCCGTCCA 8mer-A1 dme-miR-184-3p 2L + 12173828 12173960 3'utr crok FlyBase G3289.1 TGAGCGATGTGTAATCAAGTGCCTTTTCTGTAACGGACTCGTATTGTAACTTAAGCCTGGAATACTATTTCCGTCCAAAAAATATCTTACGCCTATGACATTCCATCTCGTAAACTGAATCTTGTAATACTTT 477 12173896 0.978275238 23 460 3084 0.958333333 2.139879086 0.005555556 0.368972746 0.581944444 477 26 4 690 2L:12173828-12173960 8 568.5 60 FBgn0032421 76 9.133333333 13.88666667 7.480263158 62.24452555 40.93855017 1 1 1 0.25 dme-miR-932-5p 6mer3-8 GGAATT 2L 122680 122685 - 2L_122680_122685_- 0.581801981 0.514374818 0.5480884 0.04767823 CG3164 FBtr0078153|FBtr0078155|FBtr0100379|FBtr0078154 122622|122622|122622|122622 123128|123128|123128|123128 2L - 122668 122710 3'utr CG3164 FlyBase G6327.1 TATTCAAGGTACTTTAAGACCCTTTGGAATTTTTTGTAATATT 11 122687 0.755698906 5 10 90 1 1.230448921 0 0.363636364 0.588235294 11 0 0 17 2L:122668-122710 6 CG3164 FBtr0100379|FBtr0078154|FBtr0078153|FBtr0078155 122622|122622|122622|122622 123128|123128|123128|123128 GGAATT 6mer3-8 dme-miR-932-5p 2L - 122639 122703 3'utr CG3164 FlyBase G4943.1 GGTACTTTAAGACCCTTTGGAATTTTTTGTAATATTTTCTTATTACAGGTTTAGAATAAACATTT 17 122678 0.819502112 10 15 162 0.863636364 0.67669361 0.090909091 0.294117647 0.454545455 17 0 3 19 2L:122639-122703 6 9 61 FBgn0025683 1716.21 73.79 112.3166667 0.005244113 0.121967746 0.080130583 2 -7 -2.5 0.25 dme-miR-277-3p 6mer2-7 GCATTT 2L 12403547 12403552 - 2L_12403547_12403552_- 0.771987214 0.965027107 0.86850716 0.136499822 vir-1 FBtr0100125|FBtr0334761|FBtr0080390|FBtr0080389|FBtr0305263 12403268|12403268|12403268|12403268|12403268 12403580|12403580|12403580|12403580|12403580 2L - 12403539 12403756 stop_codon vir-1 FlyBase G10255.1 ATATCGAGGAGAACTTTGTGCCCATTGACCTATCCAACGATATAGCCGTCAACGATTTGGCTGCCGCAGATCCCAATTTTCCCATCAATGAAGATGCCGAGTTCATTGTGCACCCAGCTGTAATCAGAACTATGCCTATGTTCGAGAAGCTTTCTTTAGGAGAGCCTGCGAAATGAGGTTTCTAAGTCTCTCCCACTAGTCTAGGCATTTTCTTTTAG 70 12403555 0.978626008 31 63 423 0.91025641 1.851258349 0.192307692 0.1 0.192307692 70 7 0 71 2L:12403539-12403756 6 vir-1 FBtr0305263|FBtr0080389|FBtr0080390|FBtr0334761|FBtr0100125 12403268|12403268|12403268|12403268|12403268 12403580|12403580|12403580|12403580|12403580 GCATTT 6mer2-7 dme-miR-277-3p 2L - 12403546 12403665 stop_codon vir-1 FlyBase G7915.1 AGATGCCGAGTTCATTGTGCACCCAGCTGTAATCAGAACTATGCCTATGTTCGAGAAGCTTTCTTTAGGAGAGCCTGCGAAATGAGGTTTCTAAGTCTCTCCCACTAGTCTAGGCATTTT 26 12403555 0.977444407 14 26 171 1 1.612783857 0.341463415 0.461538462 0.658536585 26 0 0 41 2L:12403546-12403665 6 16 62 FBgn0043841 3920.323333 419.3833333 639.8233333 0.004081296 0.038151254 0.025006903 3 3 3 0.25 dme-miR-1003-3p 6mer2-7 TGTGAG 2L 12426966 12426971 - 2L_12426966_12426971_- 0.979410532 0.932597447 0.956003989 0.03310186 CG5446 FBtr0080388|FBtr0333093|FBtr0333094 12426898|12426898|12426629 12427225|12427225|12427225 2L - 12426938 12426988 3'utr CG5446 FlyBase G10266.1 AAGTAAAGTAATTCTTTTGTGAGCAATGGCCAATAATTTTGAATTATTGCC 11 12426973 0.986215474 5 10 86 0.916666667 0.740362689 0 0.090909091 0.166666667 11 0 1 11 2L:12426938-12426988 6 CG5446 FBtr0333094|FBtr0080388|FBtr0333093 12426629|12426898|12426898 12427225|12427225|12427225 TGTGAG 6mer2-7 dme-miR-1003-3p 2L - 12426949 12426982 3'utr CG5446 FlyBase G7925.1 AGTAATTCTTTTGTGAGCAATGGCCAATAATTTT 5 12426972 0.643184605 3 5 44 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2L:12426949-12426982 6 7.5 63 FBgn0032429 186 33.08333333 50.87 0.040322581 0.226700252 0.147434637 2 1 1.5 0.25 dme-miR-1002-5p 8mer-A1 CTACTTAA 2L 12440481 12440488 + 2L_12440481_12440488_+ 0.35416266 0.364646083 0.359404371 0.007412883 Elf FBtr0333089|FBtr0080369|FBtr0344859|FBtr0333090 12439563|12439563|12439563|12439563 12441279|12440602|12440602|12440602 2L + 12440460 12440491 3'utr Elf FlyBase G4236.1 ATTTAAAACCATTTGATTTTGCTACTTAAAAC 6 12440479 0.956390759 3 6 51 1 0.903089987 0 0.166666667 0.375 6 0 0 8 2L:12440460-12440491 8 Elf FBtr0344859|FBtr0333090|FBtr0333089|FBtr0080369 12439563|12439563|12439563|12439563 12440602|12440602|12441279|12440602 CTACTTAA 8mer-A1 dme-miR-1002-5p 2L + 12440464 12440498 3'utr Elf FlyBase G3315.1 AAAACCATTTGATTTTGCTACTTAAAACACATTTG 5 12440479 0.976572703 2 4 39 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 2L:12440464-12440498 8 5.5 64 FBgn0020443 5168.45 195.0133333 300.5566667 0.001064149 0.0282032 0.018299378 2 2 2 0.25 dme-miR-970-3p 8mer-A1 TCTTATGA 2L 12452005 12452012 - 2L_12452005_12452012_- 0.630207493 0.630689879 0.630448686 0.000341108 CG5418 FBtr0080382 12451943 12452060 2L - 12451966 12452021 3'utr CG5418 FlyBase G10276.1 TTTAATTGTTCTTATGATTTGTCTTGGCACATTGGATCGATCTTAAGTTTACGAAT 10 12452012 0.9944873 6 9 113 0.833333333 1 0.083333333 0.2 0.333333333 10 2 0 10 2L:12451966-12452021 8 CG5418 FBtr0080382 12451943 12452060 TCTTATGA 8mer-A1 dme-miR-970-3p 2L - 12451972 12452029 3'utr CG5418 FlyBase G7931.1 AGAATAACTTTAATTGTTCTTATGATTTGTCTTGGCACATTGGATCGATCTTAAGTTT 8 12452010 0.988322705 7 8 81 1 1 0.3 0.125 0.3 8 0 0 10 2L:12451972-12452029 8 5.5 65 FBgn0032436 3.666666667 0.376666667 0.583333333 1.5 14.60176991 9.428571429 0 -2 -1 0.25 dme-miR-980-5p 7mer-m1 AAAAACT 2L 12456500 12456506 - 2L_12456500_12456506_- 0.675728106 0.487531591 0.581629849 0.133075021 bun FBtr0339528|FBtr0300523|FBtr0299652 12455538|12455538|12455538 12457755|12457755|12457755 2L - 12456494 12456538 3'utr bun FlyBase G10285.1 AGAAAGCTTATCAAAATTGTTTGTTAAACTCTAAAAACTATCTGC 5 12456517 0.987093955 4 5 39 1 0.698970004 0 0 0 5 0 0 5 2L:12456494-12456538 7 bun FBtr0299652|FBtr0300523|FBtr0339528 12455538|12455538|12455538 12457755|12457755|12457755 AAAAACT 7mer-m1 dme-miR-980-5p 2L - 12456445 12456538 3'utr bun FlyBase G7943.1 AGAAAGCTTATCAAAATTGTTTGTTAAACTCTAAAAACTATCTGCAAACAAAAAACCCAAAAATATCTGTAAATATTGTGTAAAACTAAAAACT 11 12456498 0.98448074 8 8 64 0.684210526 1.113943352 0 0.545454545 0.736842105 11 6 0 13 2L:12456445-12456538 7 3.5 66 FBgn0259176 10573.67 421.1233333 647.0833333 0.000331011 0.008311104 0.005408886 11 -8 1.5 0.25 dme-miR-988-3p 8mer-m1 ACAAGGGG 2L 12456705 12456712 - 2L_12456705_12456712_- 0.608488429 0.60075656 0.604622494 0.005467208 bun FBtr0339528|FBtr0299658|FBtr0346622|FBtr0300523|FBtr0300522|FBtr0299652|FBtr0300524|FBtr0299656 12455538|12456575|12456575|12455538|12456575|12455538|12456575|12456575 12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755 2L - 12456644 12456738 3'utr bun FlyBase G10287.1 TTAATCCTAACTTTTATTGTAAAAATACAAGGGGAAATATTAACTACATCATAAATATGAATATGTTTCAAATTAAACAATGGATAACAAAAAAA 88 12456713 0.965473444 13 80 418 0.95412844 2.017033339 0.027522936 0.215909091 0.366972477 88 5 0 104 2L:12456644-12456738 8 bun FBtr0300524|FBtr0299656|FBtr0300522|FBtr0299652|FBtr0346622|FBtr0300523|FBtr0339528|FBtr0299658 12456575|12456575|12456575|12455538|12456575|12455538|12455538|12456575 12457755|12457755|12457755|12457755|12457755|12457755|12457755|12457755 ACAAGGGG 8mer-m1 dme-miR-988-3p 2L - 12456647 12456735 3'utr bun FlyBase G7945.1 ATCCTAACTTTTATTGTAAAAATACAAGGGGAAATATTAACTACATCATAAATATGAATATGTTTCAAATTAAACAATGGATAACAAAA 59 12456713 0.973930095 10 53 322 0.916666667 1.58546073 0.05952381 0.355932203 0.547619048 59 6 1 77 2L:12456647-12456735 8 67 67 FBgn0259176 10573.67 421.1233333 647.0833333 0.006336494 0.159098285 0.103541533 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 12708635 12708640 + 2L_12708635_12708640_+ 0.915093181 0.999741879 0.95741753 0.05985567 CG6180 FBtr0080398|FBtr0080398|FBtr0080398 12708543|12708543|12708543 12708680|12708680|12708680 2L + 12708558 12708658 3'utr CG6180 FlyBase G4258.1 AACCATGCTTATATAAGCCAGTCTGAATTGGATTCAAATCTATTGTAACCTAGAAATTAAAGACACCTATGAACACTCTGTGAAACCCTCTGTTGCTGGCA 130 12708634 0.763928041 15 117 729 0.896774194 1.540954809 0.24516129 0.184615385 0.316129032 130 13 3 139 2L:12708558-12708658 6 CG6180 FBtr0080398|FBtr0080398|FBtr0080398 12708543|12708543|12708543 12708680|12708680|12708680 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 12708550 12708662 3'utr CG6180 FlyBase G3331.1 ACGCCAAAAACCATGCTTATATAAGCCAGTCTGAATTGGATTCAAATCTATTGTAACCTAGAAATTAAAGACACCTATGAACACTCTGTGAAACCCTCTGTTGCTGGCAATAA 62 12708633 0.961440018 17 59 339 0.955555556 1.633468456 0.144444444 0.274193548 0.5 62 3 1 86 2L:12708550-12708662 6 69 68 FBgn0032453 1365.473333 166.0266667 253.2533333 0.050531928 0.415595888 0.272454459 1 2 1.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 12713306 12713313 - 2L_12713306_12713313_- 0.359834063 0.338211023 0.349022543 0.015289841 Pih1D1 FBtr0089908|FBtr0089908|FBtr0089908 12713274|12713274|12713274 12713339|12713339|12713339 2L - 12713276 12713327 3'utr Pih1D1 FlyBase G10347.1 ATGAATAATGCCCGCTGTGATAATGTTAATAAAGGCGCAAATTTTACAATTT 35 12713319 0.977756556 6 33 220 0.959183673 1.672097858 0.204081633 0.285714286 0.489795918 35 2 0 47 2L:12713276-12713327 8 Pih1D1 FBtr0089908|FBtr0089908|FBtr0089908 12713274|12713274|12713274 12713339|12713339|12713339 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 12713276 12713327 3'utr Pih1D1 FlyBase G8000.1 ATGAATAATGCCCGCTGTGATAATGTTAATAAAGGCGCAAATTTTACAATTT 30 12713319 0.763971088 8 25 189 0.891304348 1.612783857 0.130434783 0.366666667 0.586956522 30 5 0 41 2L:12713276-12713327 8 31.5 69 FBgn0032455 841.0766667 43.54 66.97 0.037451996 0.723472669 0.470359863 6 6 6 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 12744636 12744643 + 2L_12744636_12744643_+ 0.478947337 0.490925885 0.484936611 0.008470149 MRP FBtr0090014|FBtr0090013|FBtr0090027|FBtr0090022|FBtr0090024|FBtr0090028|FBtr0090017|FBtr0090026|FBtr0090020|FBtr0090016|FBtr0090021|FBtr0090029|FBtr0090015|FBtr0090023|FBtr0090025|FBtr0090019|FBtr0090018 12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170 12744806|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807 2L + 12744614 12744771 3'utr MRP FlyBase G4271.1 CTTATGTATGCCACATATTTATGTACTTAAATTAACAAATCAGAAGATTGAGATACTACTTAAACTCCCTCAAGAATTTTTGCCTTCAACTGATAAGATCAGTACGAAAAACGGTCAATGTAGTTAAATCAATTTATTGAAACTTTTGTAGATTGTAT 56 12744635 0.854623124 15 52 464 0.935483871 1.462397998 0.064516129 0.107142857 0.193548387 56 3 1 58 2L:12744614-12744771 8 MRP FBtr0090015|FBtr0090023|FBtr0090026|FBtr0090019|FBtr0090018|FBtr0090016|FBtr0090020|FBtr0090029|FBtr0090021|FBtr0090025|FBtr0090014|FBtr0090028|FBtr0090027|FBtr0090017|FBtr0090024|FBtr0090013|FBtr0090022 12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170|12744170 12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744807|12744806|12744807|12744807|12744807|12744807|12744807|12744807 GTACTTAA 8mer-A1 dme-miR-252-5p 2L + 12744620 12744653 3'utr MRP FlyBase G3341.1 TATGCCACATATTTATGTACTTAAATTAACAAAT 13 12744634 0.690525964 3 12 122 0.888888889 1.204119983 0 0.307692308 0.5 13 2 0 16 2L:12744620-12744653 8 22 70 FBgn0032456 4513.983333 98.30333333 150.4066667 0.004873744 0.223797091 0.146270112 1 2 1.5 0.25 dme-miR-33-5p 6mer2-7 AATGCA 2L 12817079 12817084 - 2L_12817079_12817084_- 0.999906238 0.971083946 0.985495092 0.020380444 kek1 FBtr0332210 12816998 12819017 2L - 12817051 12817098 3'utr kek1 FlyBase G10356.1 AAAGGCGGGCATTGAATGCATGAAAGCAACTGAATGAACAACAAAGCA 7 12817085 0.914460605 5 6 20 0.857142857 0.77815125 0 0 0 7 1 0 6 2L:12817051-12817098 6 kek1 FBtr0332210 12816998 12819017 AATGCA 6mer2-7 dme-miR-33-5p 2L - 12817052 12817097 3'utr kek1 FlyBase G8009.1 AAGGCGGGCATTGAATGCATGAAAGCAACTGAATGAACAACAAAGC 6 12817085 0.882899209 3 5 14 0.857142857 0.77815125 0.285714286 0.166666667 0.285714286 6 1 0 6 2L:12817052-12817097 6 4.5 71 FBgn0015399 5185.06 109.4633333 168.6866667 0.000867878 0.041109656 0.026676679 1 1 1 0.25 dme-miR-277-3p 7mer-A1 GCATTTA 2L 12817260 12817266 - 2L_12817260_12817266_- 0.57995043 0.815360646 0.697655538 0.166460149 kek1 FBtr0332210 12816998 12819017 2L - 12817247 12817290 3'utr kek1 FlyBase G10358.1 AAAAAAGAGCAAGAAAAAACCGTAGCATTTAAGTTGAACTTATG 6 12817268 0.962192479 3 5 24 0.833333333 0.698970004 0.166666667 0 0 6 1 0 5 2L:12817247-12817290 7 kek1 FBtr0332210 12816998 12819017 GCATTTA 7mer-A1 dme-miR-277-3p 2L - 12817233 12817286 3'utr kek1 FlyBase G8011.1 AAGAGCAAGAAAAAACCGTAGCATTTAAGTTGAACTTATGTATTATGTATTGTA 7 12817265 0.986867539 5 6 56 0.875 0.84509804 0.125 0.142857143 0.25 7 1 0 7 2L:12817233-12817286 7 6 72 FBgn0015399 5185.06 109.4633333 168.6866667 0.001157171 0.054812875 0.035568905 2 -1 0.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 12818801 12818807 - 2L_12818801_12818807_- 0.450951942 0.516943614 0.483947778 0.046663179 kek1 FBtr0332210|FBtr0332210|FBtr0332210 12816998|12816998|12816998 12819017|12819017|12819017 2L - 12818785 12818864 3'utr kek1 FlyBase G10362.1 CTGATAGATAGCTCCGGGGTCCTAGGCGAGCAGCGATTATTGTGCAAGCGAACTGTTTGTGATAGTGTCTGACAAAAAGA 53 12818809 0.96985266 9 49 356 0.972972973 1.380211242 0.216216216 0.301886792 0.5 53 0 2 72 2L:12818785-12818864 7 kek1 FBtr0332210|FBtr0332210|FBtr0332210 12816998|12816998|12816998 12819017|12819017|12819017 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 12818743 12818843 3'utr kek1 FlyBase G8013.1 CTAGGCGAGCAGCGATTATTGTGCAAGCGAACTGTTTGTGATAGTGTCTGACAAAAAGATAATGCGAATGAAGATAATAATTGCCCAAAGCAAAGAGAAAG 25 12818809 0.97937753 8 21 153 0.928571429 1.591064607 0.095238095 0.48 0.69047619 25 3 0 39 2L:12818743-12818843 7 32.5 73 FBgn0015399 5185.06 109.4633333 168.6866667 0.006268008 0.296903073 0.192664901 2 2 2 0.25 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 13001290 13001297 - 2L_13001290_13001297_- 0.631083378 0.631100755 0.631092066 1.23E-05 Vha68-1 FBtr0080429|FBtr0336618 13000768|13000963 13001411|13001411 2L - 13001280 13001347 3'utr Vha68-1 FlyBase G10383.1 AAACGAAATAAGAAACCAAAGCTAGGTTATTATTCGAATTCCCCATTCAATCTAGTCATATTTACATA 15 13001299 0.990715221 5 13 131 0.866666667 0.812913357 0.133333333 0 0 15 1 1 13 2L:13001280-13001347 8 Vha68-1 FBtr0336618|FBtr0080429 13000963|13000768 13001411|13001411 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 13001260 13001312 3'utr Vha68-1 FlyBase G8028.1 GAATTCCCCATTCAATCTAGTCATATTTACATAATGCATAATAAGATATTTGA 9 13001298 0.993367954 5 7 83 0.75 0.653212514 0.083333333 0.333333333 0.5 9 2 1 9 2L:13001260-13001312 8 10.5 74 FBgn0265262 180.4566667 8.25 12.47 0.058185714 1.272727273 0.84202085 2 1 1.5 0.25 dme-miR-92b-3p 6mer2-7 TGCAAT 2L 13022627 13022632 - 2L_13022627_13022632_- 0.999397765 0.999995434 0.999696599 0.000422567 CG9932 FBtr0310277|FBtr0336617 13021866|13021866 13023322|13023322 2L - 13022604 13022654 3'utr CG9932 FlyBase G10414.1 AAGAAAGTGAGCGCGTATATCATGCAATGAATATGGTACTATATACATACT 24 13022636 0.66228318 6 23 124 0.965517241 1.447158031 0.344827586 0.166666667 0.310344828 24 1 0 28 2L:13022604-13022654 6 CG9932 FBtr0336617|FBtr0310277 13021866|13021866 13023322|13023322 TGCAAT 6mer2-7 dme-miR-92b-3p 2L - 13022601 13022652 3'utr CG9932 FlyBase G8054.1 GAAAGTGAGCGCGTATATCATGCAATGAATATGGTACTATATACATACTATA 19 13022635 0.979678543 6 15 106 0.740740741 1.301029996 0.481481481 0.315789474 0.518518519 19 7 0 20 2L:13022601-13022652 6 20.5 75 FBgn0262160 822.2633333 11.45 17.61 0.024931186 1.790393013 1.1641113 4 3 3.5 0.25 dme-miR-282-5p 6mer2-7 GAGGCT 2L 13168888 13168893 + 2L_13168888_13168893_+ 0.960003812 0.898423045 0.929213429 0.043544201 Sir2 FBtr0080434 13168640 13169551 2L + 13168864 13168964 3'utr Sir2 FlyBase G4323.1 CGGATCCACTAGTTTACTCAATTCGAGGCTTTAGAGATCTGACCCTCGTTGCTTTACCACCAACCCCTTATGCCCAATCCCGTTTTGATATTTTTGAAAAA 49 13168894 0.981189427 15 47 343 0.95 1.45484486 0.216666667 0.224489796 0.366666667 49 2 1 57 2L:13168864-13168964 6 Sir2 FBtr0080434 13168640 13169551 GAGGCT 6mer2-7 dme-miR-282-5p 2L + 13168843 13168956 3'utr Sir2 FlyBase G3368.1 GAAGTTTTCAAGAAATGAAACCGGATCCACTAGTTTACTCAATTCGAGGCTTTAGAGATCTGACCCTCGTTGCTTTACCACCAACCCCTTATGCCCAATCCCGTTTTGATATTT 35 13168894 0.974111332 15 35 214 1 1.672097858 0.340425532 0.257142857 0.446808511 35 0 0 47 2L:13168843-13168956 6 29.5 76 FBgn0024291 729.5333333 23.15666667 35.49 0.040436809 1.273931193 0.831220062 -6 -6 -6 0.25 dme-miR-283-5p 8mer-A1 TGATATTA 2L 13178947 13178954 + 2L_13178947_13178954_+ 0.483526738 0.450166952 0.466846845 0.02358887 CG5439 FBtr0080435 13178812 13178978 2L + 13178876 13178970 3'utr CG5439 FlyBase G4333.1 TTTATCTATTTCGTTGTAGATATCTTTATCTATATGTGTAATAACGGAGTTGGTCCAAGTGTTGTAATCATTGATATTAAATAAAGTTAAGCCTT 51 13178946 0.986672498 8 51 490 1 1.740362689 0.090909091 0.058823529 0.127272727 51 0 0 55 2L:13178876-13178970 8 CG5439 FBtr0080435 13178812 13178978 TGATATTA 8mer-A1 dme-miR-283-5p 2L + 13178901 13178969 3'utr CG5439 FlyBase G3378.1 TTATCTATATGTGTAATAACGGAGTTGGTCCAAGTGTTGTAATCATTGATATTAAATAAAGTTAAGCCT 33 13178946 0.989590839 5 32 311 0.980769231 1.707570176 0.019230769 0.424242424 0.634615385 33 1 0 51 2L:13178901-13178969 8 37.5 77 FBgn0032476 436.6666667 29.4 45.33 0.085877863 1.275510204 0.827266711 1 1 1 0.25 dme-miR-184-5p 8mer-A1 TGATAAGA 2L 13180749 13180756 - 2L_13180749_13180756_- 0.327945542 0.320742839 0.324344191 0.005093078 CG31849 FBtr0080490 13180396 13180988 2L - 13180720 13180786 3'utr CG31849 FlyBase G10472.1 AGCAGACAGGACAGACAGACCCGCCATCTGTGATAAGAAAAACCAGAACTAAACAATGAATTTATGA 48 13180760 0.95162593 4 46 143 0.947368421 1.73239376 0.157894737 0.145833333 0.280701754 48 3 0 54 2L:13180720-13180786 8 CG31849 FBtr0080490 13180396 13180988 TGATAAGA 8mer-A1 dme-miR-184-5p 2L - 13180746 13180783 3'utr CG31849 FlyBase G8088.1 AGACAGGACAGACAGACCCGCCATCTGTGATAAGAAAA 32 13180760 0.959104993 2 32 96 1 1.602059991 0.175 0.21875 0.375 32 0 0 40 2L:13180746-13180783 8 39 78 FBgn0051849 77.33333333 4.373333333 6.81 0.504310345 8.917682927 5.726872247 4 4 4 0.25 dme-bantam-3p 7mer-m8 TGATCTC 2L 13183895 13183901 - 2L_13183895_13183901_- 0.535808321 0.654873437 0.595340879 0.08419174 CG16974 FBtr0305555 13183847 13185416 2L - 13183856 13183930 3'utr CG16974 FlyBase G10475.1 GGCGACCCTTCCTGTAGTTCCCATCATACTGATCTCCGTTGGGCAGGATGGCCCAACCTCTACCTTGTCTCTGTC 32 13183901 0.999830633 7 30 220 0.973684211 1.267171728 0.078947368 0.15625 0.289473684 32 0 1 37 2L:13183856-13183930 7 CG16974 FBtr0305555 13183847 13185416 TGATCTC 7mer-m8 dme-bantam-3p 2L - 13183858 13183916 3'utr CG16974 FlyBase G8089.1 TAGTTCCCATCATACTGATCTCCGTTGGGCAGGATGGCCCAACCTCTACCTTGTCTCTG 20 13183901 0.985176194 7 18 147 0.857142857 1.380211242 0.178571429 0.3 0.5 20 4 0 24 2L:13183858-13183916 7 24 79 FBgn0032479 2807.686667 76.92 117.31 0.008547962 0.31201248 0.204586139 0 0 0 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 2L 13185071 13185077 - 2L_13185071_13185077_- 0.502194734 0.508687183 0.505440958 0.004590891 CG16974 FBtr0305555|FBtr0080489 13183847|13184945 13185416|13185416 2L - 13185059 13185097 3'utr CG16974 FlyBase G10477.1 TGAAAAGAGAGCCCCCCATTTGTGATTTCATTACTTAAC 15 13185078 0.981420804 4 15 110 1 1.361727836 0.304347826 0.333333333 0.565217391 15 0 0 23 2L:13185059-13185097 7 CG16974 FBtr0080489|FBtr0305555 13184945|13183847 13185416|13185416 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 13185065 13185093 3'utr CG16974 FlyBase G8090.1 AAGAGAGCCCCCCATTTGTGATTTCATTA 11 13185072 0.972060849 4 11 68 1 1.230448921 0.176470588 0.272727273 0.529411765 11 0 0 17 2L:13185065-13185093 7 13 80 FBgn0032479 2807.686667 76.92 117.31 0.004630146 0.16900676 0.110817492 1 -5 -2 0.25 dme-miR-277-3p 7mer-m8 TGCATTT 2L 13196492 13196498 + 2L_13196492_13196498_+ 0.561425447 0.589379624 0.575402535 0.019766604 Edem2 FBtr0080438|FBtr0333235 13196270|13196270 13197281|13197281 2L + 13196457 13196539 3'utr Edem2 FlyBase G4347.1 ATGCCACGAGTTATGGAACTCAGTTTAGGGATCTTTGCATTTCGTGGTTGGTTCTCAGGCAGGCAATTGGCTTCCTAGTGGCT 20 13196491 0.989274348 8 18 169 0.92 1.361727836 0.4 0.2 0.36 20 2 0 23 2L:13196457-13196539 7 Edem2 FBtr0333235|FBtr0080438 13196270|13196270 13197281|13197281 TGCATTT 7mer-m8 dme-miR-277-3p 2L + 13196382 13196540 3'utr Edem2 FlyBase G3385.1 GTAACGTGTGTACAGTAAGCGAACGTAACTAAATTGGAATTTCCTGTACTTTACTAGACATGTAAGAGCGATTTAATGCCACGAGTTATGGAACTCAGTTTAGGGATCTTTGCATTTCGTGGTTGGTTCTCAGGCAGGCAATTGGCTTCCTAGTGGCTA 43 13196491 0.988508391 18 40 372 0.9375 1.77815125 0.4375 0.348837209 0.5625 43 4 0 60 2L:13196382-13196540 7 17.5 81 FBgn0032480 836.01 24.70333333 37.89 0.020932764 0.708406423 0.461863288 1 1 1 0.25 dme-miR-1012-3p 6mer2-7 TGACTA 2L 13301106 13301111 + 2L_13301106_13301111_+ 0.928707386 0.500503248 0.714605317 0.302786094 CG31729 FBtr0080462|FBtr0344140|FBtr0080461|FBtr0344851 13301064|13301064|13301064|13301064 13301668|13301668|13301516|13301516 2L + 13301050 13301119 stop_codon CG31729 FlyBase G4407.1 CTTGAAGCTCTCTTAGATGGCGGCCTGGCAAATGAAATACAAATTACACATTATCCTGACTATAATTTCC 33 13301100 0.943179603 11 32 204 0.975609756 1.602059991 0.024390244 0.212121212 0.365853659 33 1 0 40 2L:13301050-13301119 6 CG31729 FBtr0344851|FBtr0080461|FBtr0344140|FBtr0080462 13301064|13301064|13301064|13301064 13301516|13301516|13301668|13301668 TGACTA 6mer2-7 dme-miR-1012-3p 2L + 13301088 13301122 3'utr CG31729 FlyBase G3429.2 ACAAATTACACATTATCCTGACTATAATTTCCATT 16 13301100 0.755958543 2 13 111 0.782608696 1.255272505 0 0.3125 0.52173913 16 5 0 18 2L:13301088-13301122 6 18 82 FBgn0051729 1443.476667 38.43 58.66333333 0.012469893 0.468384075 0.306835616 6 6 6 0.25 dme-miR-2a-2-5p 8mer-A1 TGATGAGA 2L 13376051 13376058 + 2L_13376051_13376058_+ 0.600189013 0.600663075 0.600426044 0.000335239 CG6565 FBtr0080468|FBtr0346420|FBtr0342631 13375839|13375839|13375839 13376165|13376404|13376165 2L + 13375998 13376072 3'utr CG6565 FlyBase G4433.1 TCAGAGCAAGTGTGCAATAGGTGGAAGTTTTGCTCTTAACATGAGTGCCACTTTGATGAGAAACTTAAAAATAAA 9 13376050 0.976265819 6 8 49 0.888888889 0.903089987 0.111111111 0 0 9 1 0 8 2L:13375998-13376072 8 CG6565 FBtr0342631|FBtr0080468|FBtr0346420 13375839|13375839|13375839 13376165|13376165|13376404 TGATGAGA 8mer-A1 dme-miR-2a-2-5p 2L + 13376016 13376062 3'utr CG6565 FlyBase G3445.1 AGGTGGAAGTTTTGCTCTTAACATGAGTGCCACTTTGATGAGAAACT 8 13376050 0.978307487 4 7 48 1 1.113943352 0 0.5 0.692307692 8 0 0 13 2L:13376016-13376062 8 6 83 FBgn0032513 608.7166667 34.34 52.78 0.009856803 0.174723355 0.113679424 1 1 1 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 134009 134014 + 2L_134009_134014_+ 0.996041732 0.901476829 0.948759281 0.066867482 Gs1 FBtr0078115|FBtr0078114 133681|133681 134472|134472 2L + 133997 134030 5'utr Gs1 FlyBase G475.1 CGTTAATTTTTTGTACCTTTTAGATCAAACAAAC 13 134016 0.70171495 3 13 147 1 1.204119983 0 0.153846154 0.3125 13 0 0 16 2L:133997-134030 6 Gs1 FBtr0078114|FBtr0078115 133681|133681 134472|134472 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 133996 134027 5'utr Gs1 FlyBase G395.1 ACGTTAATTTTTTGTACCTTTTAGATCAAACA 17 134016 0.742041269 2 17 193 1 1.447158031 0 0.470588235 0.678571429 17 0 0 28 2L:133996-134027 6 15 84 FBgn0001142 30.66666667 1.793333333 2.72 0.489130435 8.364312268 5.514705882 -7 -7 -7 0.25 dme-miR-1007-3p 6mer3-8 TGAGCT 2L 13410801 13410806 + 2L_13410801_13410806_+ 0.952093503 0.975509046 0.963801274 0.016557259 CG7110 FBtr0080500|FBtr0345438 13410635|13410635 13411047|13410955 2L + 13410765 13410857 3'utr CG7110 FlyBase G4481.1 ATTTTGTAAACAACTCATGTAGTTATAACTTTATAGTGAGCTGGTTCCAAGTGCTTCGGCTGTTTCATTCAGCGACTCTAATACATAAGGCAT 19 13410820 0.748782427 12 17 137 0.923076923 1.380211242 0.153846154 0.210526316 0.423076923 19 2 0 24 2L:13410765-13410857 6 CG7110 FBtr0080500|FBtr0345438 13410635|13410635 13411047|13410955 TGAGCT 6mer3-8 dme-miR-1007-3p 2L + 13410767 13410827 3'utr CG7110 FlyBase G3479.1 TTTGTAAACAACTCATGTAGTTATAACTTTATAGTGAGCTGGTTCCAAGTGCTTCGGCTGT 14 13410784 0.776642792 6 13 105 1 1.322219295 0.19047619 0.285714286 0.523809524 14 0 0 21 2L:13410767-13410827 6 9 85 FBgn0032521 924.9866667 37.5 57.29 0.00972987 0.24 0.157095479 -19 17 -1 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2L 13502806 13502812 - 2L_13502806_13502812_- 0.658001067 0.650308268 0.654154667 0.005439631 B4 FBtr0332509|FBtr0080514|FBtr0080513 13500622|13502654|13502654 13504503|13504503|13504503 2L - 13502752 13502841 3'utr B4 FlyBase G10603.1 AAGTAGAGTTTAGACACTAAGGTCCAGTTTCTAGTCTTAATTTGAAAACAAATATGAAGCCGTTTCGAAATGGAGACATGCCAAACTTTT 61 13502813 0.952635164 6 58 479 0.974025974 1.875061263 0.077922078 0.229508197 0.38961039 61 2 0 75 2L:13502752-13502841 7 B4 FBtr0080513|FBtr0332509|FBtr0080514 13502654|13500622|13502654 13504503|13504503|13504503 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2L - 13502793 13502840 3'utr B4 FlyBase G8172.1 AGTAGAGTTTAGACACTAAGGTCCAGTTTCTAGTCTTAATTTGAAAAC 45 13502813 0.73558114 2 44 376 0.983606557 1.77815125 0.06557377 0.333333333 0.508196721 45 1 0 60 2L:13502793-13502840 7 48 86 FBgn0023407 923.55 17.94 27.61666667 0.051973364 2.675585284 1.738080869 1 1 1 0.25 dme-bantam-3p 6mer2-7 GATCTC 2L 13503093 13503098 - 2L_13503093_13503098_- 0.989984917 0.999186725 0.994585821 0.006506655 B4 FBtr0332509|FBtr0080514|FBtr0080513 13500622|13502654|13502654 13504503|13504503|13504503 2L - 13503075 13503154 3'utr B4 FlyBase G10605.1 ATTGTATATTTGTAAAATAGCATAAACTTTTAGGGCAAAATGCCAAACTTTTACACGATCTCTCGTATTTTGTCGTTCTT 40 13503103 0.791648182 11 36 336 0.96 1.681241237 0.02 0.175 0.34 40 2 0 48 2L:13503075-13503154 6 B4 FBtr0080513|FBtr0332509|FBtr0080514 13502654|13500622|13502654 13504503|13504503|13504503 GATCTC 6mer2-7 dme-bantam-3p 2L - 13503074 13503137 3'utr B4 FlyBase G8173.1 TAGCATAAACTTTTAGGGCAAAATGCCAAACTTTTACACGATCTCTCGTATTTTGTCGTTCTTT 30 13503104 0.681875235 10 28 262 0.866666667 1.591064607 0 0.333333333 0.555555556 30 6 0 39 2L:13503074-13503137 6 29 87 FBgn0023407 923.55 17.94 27.61666667 0.031400574 1.616499443 1.050090525 5 6 5.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2L 13636744 13636750 + 2L_13636744_13636750_+ 0.481438022 0.81700756 0.649222791 0.23728354 kuz FBtr0080509|FBtr0080510|FBtr0342903 13636648|13636648|13636247 13638238|13639411|13636995 2L + 13636728 13636757 3'utr kuz FlyBase G4505.1 ATAGAATCGCCCGCTGCTAGTCATCGAACT 12 13636742 0.860059869 2 12 49 1 1.079181246 0.166666667 0 0 12 0 0 12 2L:13636728-13636757 7 kuz FBtr0342903|FBtr0080509|FBtr0080510 13636247|13636648|13636648 13636995|13638238|13639411 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L + 13636720 13636757 3'utr kuz FlyBase G3496.1 AACCACATATAGAATCGCCCGCTGCTAGTCATCGAACT 6 13636742 0.945611426 3 6 27 1 0.84509804 0.428571429 0.166666667 0.285714286 6 0 0 7 2L:13636720-13636757 7 9 88 FBgn0259984 6208.386667 134.8066667 206.8566667 0.001449652 0.066762277 0.043508387 2 2 2 0.25 dme-miR-79-3p 7mer-A1 AGCTTTA 2L 13637314 13637320 + 2L_13637314_13637320_+ 0.574660639 0.823214583 0.698937611 0.175754219 kuz FBtr0080509|FBtr0080510 13636648|13636648 13638238|13639411 2L + 13637289 13637339 stop_codon kuz FlyBase G4507.1 CGTCGCGCCGCCTCCGCTACAAGTAAGCTTTAGTCGGCCGACATCGTTGCA 10 13637312 0.961517742 2 9 58 0.833333333 1 0.416666667 0.2 0.333333333 10 2 0 10 2L:13637289-13637339 7 kuz FBtr0080509|FBtr0080510 13636648|13636648 13638238|13639411 AGCTTTA 7mer-A1 dme-miR-79-3p 2L + 13637298 13637331 stop_codon kuz FlyBase G3497.1 GCCTCCGCTACAAGTAAGCTTTAGTCGGCCGACA 5 13637321 0.894000975 3 5 26 1 0.903089987 0.125 0.2 0.5 5 0 0 8 2L:13637298-13637331 7 7.5 89 FBgn0259984 6208.386667 134.8066667 206.8566667 0.001208043 0.055635231 0.03625699 2 -7 -2.5 0.25 dme-miR-283-5p 8mer-m1 TGATATTT 2L 13637779 13637786 + 2L_13637779_13637786_+ 0.412682194 0.364728188 0.388705191 0.033908599 kuz FBtr0100660|FBtr0080509|FBtr0080510|FBtr0301412 13637320|13636648|13636648|13637495 13639411|13638238|13639411|13638238 2L + 13637747 13637786 3'utr kuz FlyBase G4509.1 AATTTCGTAATACAGAAAAAGCTGAAAGTGAATGATATTT 9 13637778 0.873734376 4 9 38 1 1.113943352 0.153846154 0.333333333 0.538461538 9 0 0 13 2L:13637747-13637786 8 kuz FBtr0301412|FBtr0080509|FBtr0080510|FBtr0100660 13637495|13636648|13636648|13637320 13638238|13638238|13639411|13639411 TGATATTT 8mer-m1 dme-miR-283-5p 2L + 13637755 13637786 3'utr kuz FlyBase G3500.1 AATACAGAAAAAGCTGAAAGTGAATGATATTT 5 13637779 0.915451934 2 5 19 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2L:13637755-13637786 8 6.5 90 FBgn0259984 6208.386667 134.8066667 206.8566667 0.001046971 0.0482172 0.031422724 1 0 0.5 0.25 dme-miR-968-5p 6mer3-8 ACTACT 2L 13638795 13638800 + 2L_13638795_13638800_+ 0.689722934 0.582461415 0.636092175 0.075845334 kuz FBtr0100660|FBtr0080510 13637320|13636648 13639411|13639411 2L + 13638724 13638808 3'utr kuz FlyBase G4511.3 TTTTGTCTGTGTTTCGTATTTGCATGCTCAAGAACTAATCGTGCAACTACTCACGGAGTCCCGACTGATGTACTACTCCAAGAAA 107 13638796 0.933798296 10 101 525 0.960629921 2.086359831 0.322834646 0.177570093 0.307086614 107 5 0 122 2L:13638724-13638808 6 kuz FBtr0080510|FBtr0100660 13636648|13637320 13639411|13639411 ACTACT 6mer3-8 dme-miR-968-5p 2L + 13638769 13638808 3'utr kuz FlyBase G3504.1 ACTACTCACGGAGTCCCGACTGATGTACTACTCCAAGAAA 64 13638796 0.703937022 4 62 307 0.990291262 1.707570176 0.40776699 0.40625 0.631067961 64 0 1 102 2L:13638769-13638808 6 73.5 91 FBgn0259984 6208.386667 134.8066667 206.8566667 0.011838824 0.545225261 0.355318498 -1 -1 -1 0.25 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 13782423 13782429 - 2L_13782423_13782429_- 0.806347359 0.699730479 0.753038919 0.075389533 CG16890 FBtr0343661|FBtr0329825 13782229|13782229 13782609|13782609 2L - 13782411 13782462 3'utr CG16890 FlyBase G10642.1 GACACCAAATCTAAAGTTGAACTGGACATTAAGGCTGTGACTCTGATTGATT 21 13782440 0.743182755 7 20 134 0.966666667 1.462397998 0.233333333 0.333333333 0.533333333 21 1 0 29 2L:13782411-13782462 7 CG16890 FBtr0329825|FBtr0343661 13782229|13782229 13782609|13782609 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L - 13782414 13782448 3'utr CG16890 FlyBase G8199.1 AGTTGAACTGGACATTAAGGCTGTGACTCTGATTG 9 13782433 0.73314951 3 9 56 1 1.041392685 0.272727273 0.222222222 0.363636364 9 0 0 11 2L:13782414-13782448 7 14 92 FBgn0028932 129.2066667 16.03333333 24.55666667 0.108353542 0.873180873 0.57010995 11 4 7.5 0.25 dme-miR-980-3p 6mer3-8 GGCAGC 2L 1380777 1380782 - 2L_1380777_1380782_- 0.996376445 0.987178706 0.991777576 0.006503756 lea FBtr0329985|FBtr0077941 1380084|1380084 1381443|1381611 2L - 1380723 1380813 3'utr lea FlyBase G6798.1 TAGTGTATACACCCACTTAGATAGATCGATGGGCAGCATTTTGTTTGTTACTTAAGGGGTTCGTAATTAGTCTAAGCGTCCAGGCAGATAT 31 1380774 0.704633136 12 30 190 0.972972973 1.556302501 0.135135135 0.161290323 0.297297297 31 1 0 36 2L:1380723-1380813 6 lea FBtr0329985|FBtr0077941 1380084|1380084 1381443|1381611 GGCAGC 6mer3-8 dme-miR-980-3p 2L - 1380700 1380814 3'utr lea FlyBase G5313.1 ATAGTGTATACACCCACTTAGATAGATCGATGGGCAGCATTTTGTTTGTTACTTAAGGGGTTCGTAATTAGTCTAAGCGTCCAGGCAGATATCAATTCAGTAGCCACGAATGTTT 27 1380773 0.981193301 11 26 191 0.974358974 1.579783597 0.076923077 0.37037037 0.564102564 27 1 0 38 2L:1380700-1380814 6 19 93 FBgn0002543 15.93666667 0.32 0.503333333 1.192219201 59.375 37.74834437 -8 -9 -8.5 0.25 dme-miR-184-5p 8mer-m1 TGATAAGG 2L 13819398 13819405 + 2L_13819398_13819405_+ 0.565694572 0.555834543 0.560764557 0.006972144 Sos FBtr0080541 13819377 13819824 2L + 13819333 13819416 lincRNA_intron-lincRNA_exon Sos FlyBase G4579.1 AGATAAAGGTACGATGTTTCTTTACCCAAGTACAAACGAAGAATAATTTAAATTGCCTGGCGATGTGATAAGGACGAAAACTAC 33 13819387 0.974682324 9 29 191 0.868421053 1.041392685 0.368421053 0.151515152 0.263157895 33 3 2 33 2L:13819333-13819416 8 Sos FBtr0080541 13819377 13819824 TGATAAGG 8mer-m1 dme-miR-184-5p 2L + 13819377 13819409 stop_codon Sos FlyBase G3558.1 AATTTAAATTGCCTGGCGATGTGATAAGGACGA 10 13819388 0.701574928 6 9 49 0.75 1.079181246 0.5625 0.3 0.5625 10 4 0 12 2L:13819377-13819409 8 15 94 FBgn0001965 887.1 19.05333333 29.30333333 0.016909029 0.787263821 0.511887157 11 10 10.5 0.25 dme-miR-282-5p 6mer2-7 GAGGCT 2L 13824070 13824075 - 2L_13824070_13824075_- 0.953370942 0.980484908 0.966927925 0.019172493 tam FBtr0080571 13823978 13824139 2L - 13824042 13824098 3'utr tam FlyBase G10648.1 ACTCAGGAAGTCAAGGAGACTTGGAGGCTGTTACTAGTTCCTCTTAAATTGTAAGGC 28 13824077 0.814754382 7 26 155 0.96875 1.491361694 0.125 0.107142857 0.21875 28 1 0 31 2L:13824042-13824098 6 tam FBtr0080571 13823978 13824139 GAGGCT 6mer2-7 dme-miR-282-5p 2L - 13824042 13824098 3'utr tam FlyBase G8204.1 ACTCAGGAAGTCAAGGAGACTTGGAGGCTGTTACTAGTTCCTCTTAAATTGTAAGGC 19 13824077 0.920677179 7 18 92 1 1.51851394 0.212121212 0.578947368 0.757575758 19 0 0 33 2L:13824042-13824098 6 21 95 FBgn0004406 477.07 15.66333333 23.98666667 0.044018697 1.34071079 0.875486381 2 2 2 0.25 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 13831862 13831868 - 2L_13831862_13831868_- 0.398238879 0.44029993 0.419269405 0.029741618 CG33649 FBtr0091626 13831480 13832624 2L - 13831830 13831884 intron-3'utr CG33649 FlyBase G10670.1 GCTCTGCTTCTGGATGGCTGTGATCATGGCCGGGACTCGCAATCCCTGCTCTTAC 45 13831858 0.841147265 5 44 281 0.981132075 1.716003344 0.698113208 0.155555556 0.283018868 45 1 0 52 2L:13831830-13831884 7 CG33649 FBtr0091626 13831480 13832624 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L - 13831831 13831882 3'utr CG33649 FlyBase G8220.1 TCTGCTTCTGGATGGCTGTGATCATGGCCGGGACTCGCAATCCCTGCTCTTA 34 13831858 0.859863205 4 32 205 0.929824561 1.72427587 0.561403509 0.529411765 0.719298246 34 4 0 53 2L:13831831-13831882 7 38.5 96 FBgn0064115 259.7433333 20.19 30.89333333 0.148223246 1.906884596 1.246223565 -10 -10 -10 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 13831960 13831967 - 2L_13831960_13831967_- 0.606440896 0.588763751 0.597602324 0.012499597 CG33649 FBtr0091626|FBtr0091626|FBtr0091626 13831480|13831480|13831480 13832624|13832624|13832624 2L - 13831945 13831991 5'utr CG33649 FlyBase G10671.1 TTGTGCAACCGACTGTCATAAGGTCTGTGATAGAGCTGGAAACTACC 41 13831968 0.738875031 8 35 257 0.85106383 1.124938737 0.468085106 0.146341463 0.255319149 41 5 2 40 2L:13831945-13831991 8 CG33649 FBtr0091626|FBtr0091626|FBtr0091626 13831480|13831480|13831480 13832624|13832624|13832624 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 13831947 13831982 5'utr CG33649 FlyBase G8221.1 CGACTGTCATAAGGTCTGTGATAGAGCTGGAAACTA 17 13831968 0.751527328 3 14 105 0.90625 1.161368002 0.09375 0.411764706 0.6875 17 2 1 29 2L:13831947-13831982 8 27.5 97 FBgn0064115 259.7433333 20.19 30.89333333 0.105873747 1.362060426 0.890159689 1 1 1 0.25 dme-bantam-3p 6mer3-8 TGATCT 2L 13899145 13899150 - 2L_13899145_13899150_- 0.918005387 0.548493552 0.73324947 0.2612843 Smg5 FBtr0080562 13898826 13899821 2L - 13899133 13899216 3'utr Smg5 FlyBase G10677.1 TGTACCATGTCGTATTCAAGATTTCGCATTTCCTGTGTCGGGCTGGACTATGGATCCAAAAACTCTTGATCTTTCCTGCAGTTG 20 13899150 0.787885031 11 20 153 1 1.342422681 0.136363636 0.1 0.181818182 20 0 0 22 2L:13899133-13899216 6 Smg5 FBtr0080562 13898826 13899821 TGATCT 6mer3-8 dme-bantam-3p 2L - 13899133 13899181 3'utr Smg5 FlyBase G8227.1 TGTCGGGCTGGACTATGGATCCAAAAACTCTTGATCTTTCCTGCAGTTG 9 13899150 0.979768736 4 9 61 1 1.079181246 0.083333333 0.222222222 0.416666667 9 0 0 12 2L:13899133-13899181 6 11 98 FBgn0019890 1083.97 27.57666667 42.05333333 0.010147882 0.398887949 0.261572606 0 0 0 0.25 dme-miR-1008-3p 6mer2-7 GCTGTG 2L 14048793 14048798 + 2L_14048793_14048798_+ 0.996664515 0.96366444 0.980164477 0.023334594 NimC4 FBtr0080592 14048763 14048863 2L + 14048771 14048818 3'utr NimC4 FlyBase G4599.1 CAGGTTCATCCCTTGGCGTTGGGCTGTGTTATATCAACATTGATTGTT 44 14048799 0.978310372 8 43 408 0.957446809 1.653212514 0 0.068181818 0.127659574 44 2 0 45 2L:14048771-14048818 6 NimC4 FBtr0080592 14048763 14048863 GCTGTG 6mer2-7 dme-miR-1008-3p 2L + 14048772 14048816 3'utr NimC4 FlyBase G3570.1 AGGTTCATCCCTTGGCGTTGGGCTGTGTTATATCAACATTGATTG 32 14048799 0.899308396 8 31 294 0.980769231 1.707570176 0.019230769 0.5 0.692307692 32 1 0 51 2L:14048772-14048816 6 37.5 99 FBgn0260011 2 0.196666667 0.31 18.75 190.6779661 120.9677419 -6 -6 -6 0.25 dme-miR-14-3p 6mer2-7 AGACTG 2L 14184939 14184944 - 2L_14184939_14184944_- 0.983828094 0.999251219 0.991539656 0.010905779 Dyrk2 FBtr0089290|FBtr0089289|FBtr0329933|FBtr0100448|FBtr0100447 14184476|14184476|14184476|14184476|14184476 14186137|14186137|14186065|14186137|14186137 2L - 14184927 14185000 3'utr Dyrk2 FlyBase G10700.1 AAGACGGCAGACAGTTTGATATGAACTTGAGCTGGGTAAGATTGCTTACCAAATCCAGACTGTAATTTGAACGA 9 14184947 0.97246596 6 9 57 1 1.041392685 0.545454545 0.222222222 0.363636364 9 0 0 11 2L:14184927-14185000 6 Dyrk2 FBtr0100447|FBtr0100448|FBtr0329933|FBtr0089289|FBtr0089290 14184476|14184476|14184476|14184476|14184476 14186137|14186137|14186065|14186137|14186137 AGACTG 6mer2-7 dme-miR-14-3p 2L - 14184910 14184968 3'utr Dyrk2 FlyBase G8244.1 TGGGTAAGATTGCTTACCAAATCCAGACTGTAATTTGAACGAAGTTTGTAACCTGTAAT 13 14184935 0.906287318 7 12 84 0.888888889 1.204119983 0.277777778 0.307692308 0.5 13 2 0 16 2L:14184910-14184968 6 7.5 100 FBgn0016930 948.1733333 27.29666667 41.49333333 0.007909946 0.274758823 0.180751928 3 -9 -3 0.25 dme-miR-7-5p 6mer2-7 TCTTCC 2L 14185712 14185717 - 2L_14185712_14185717_- 0.835820701 0.832830234 0.834325468 0.002114603 Dyrk2 FBtr0089288|FBtr0089290|FBtr0089289|FBtr0329933|FBtr0100448|FBtr0336949|FBtr0100447 14185024|14184476|14184476|14184476|14184476|14185660|14184476 14186137|14186137|14186137|14186065|14186137|14186137|14186137 2L - 14185664 14185790 3'utr Dyrk2 FlyBase G10704.1 TATTTCGCTACTGCCATAGCTAAAGGTATTCAAAATCGTATTCACACCCACAAACCCTTCCTGAAAAGTATTCTCTTCCCTCCAACTCCCTCCATCCTTTTACACTGTATTCAAAATGAACAAACCA 467 14185715 0.984860647 17 458 3806 0.979890311 2.428134794 0.142595978 0.139186296 0.265082267 467 10 1 536 2L:14185664-14185790 6 Dyrk2 FBtr0100447|FBtr0336949|FBtr0100448|FBtr0329933|FBtr0089289|FBtr0089290|FBtr0089288 14184476|14185660|14184476|14184476|14184476|14184476|14185024 14186137|14186137|14186137|14186065|14186137|14186137|14186137 TCTTCC 6mer2-7 dme-miR-7-5p 2L - 14185688 14185739 3'utr Dyrk2 FlyBase G8249.1 AAACCCTTCCTGAAAAGTATTCTCTTCCCTCCAACTCCCTCCATCCTTTTAC 223 14185715 0.74952948 6 215 1746 0.968847352 1.714609139 0.130841121 0.349775785 0.548286604 223 5 5 311 2L:14185688-14185739 6 335.5 101 FBgn0016930 948.1733333 27.29666667 41.49333333 0.353838257 12.29087801 8.085636247 -2 -2 -2 0.25 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 14325959 14325966 + 2L_14325959_14325966_+ 0.514986492 0.615711642 0.565349067 0.071223401 wb FBtr0305063 14325709 14326280 2L + 14325937 14326000 3'utr wb FlyBase G4600.1 CACTCTCATGGGCAGACTGATTTAGCTTTAAGCTAGCGCATCTTGATCCTCAGATAACCGAAAC 27 14325980 0.755398847 5 26 185 0.967741935 1.477121255 0.161290323 0.148148148 0.258064516 27 1 0 30 2L:14325937-14326000 8 wb FBtr0305063 14325709 14326280 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L + 14325935 14325996 3'utr wb FlyBase G3572.1 TTCACTCTCATGGGCAGACTGATTTAGCTTTAAGCTAGCGCATCTTGATCCTCAGATAACCG 18 14325957 0.752506779 4 18 130 1 1.568201724 0.108108108 0.611111111 0.810810811 18 0 0 37 2L:14325935-14325996 8 15.5 102 FBgn0261563 1083 12.21333333 18.64 0.014312096 1.269104803 0.831545064 -21 2 -9.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2L 14327834 14327839 + 2L_14327834_14327839_+ 0.982718199 0.968777008 0.975747604 0.009857917 wb FBtr0302732|FBtr0302732|FBtr0302732|FBtr0302734|FBtr0302734|FBtr0302734|FBtr0302731|FBtr0302731|FBtr0302731|FBtr0302733|FBtr0302733|FBtr0302733|FBtr0302735|FBtr0302735|FBtr0302735 14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750 14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262 2L + 14327814 14327918 3'utr wb FlyBase G4602.2 AAAACTTTTTCCAAATGTATTGTGATCAATAACGAGTTTAGAGCCACCTATTTATAGCCCTTCACTGCCATATAAGTTAGGTTACTGTAGGATTAGCTTTGAATG 113 14327833 0.861015229 16 103 969 0.916030534 1.602059991 0.083969466 0.123893805 0.244274809 113 9 2 120 2L:14327814-14327918 6 wb FBtr0302731|FBtr0302731|FBtr0302731|FBtr0302732|FBtr0302732|FBtr0302732|FBtr0302734|FBtr0302734|FBtr0302734|FBtr0302733|FBtr0302733|FBtr0302733|FBtr0302735|FBtr0302735|FBtr0302735 14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750 14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 14327782 14327860 3'utr wb FlyBase G3573.1 CGGGCGCATCTGGTTCCTGTTGACGCCACACCAAAACTTTTTCCAAATGTATTGTGATCAATAACGAGTTTAGAGCCAC 45 14327833 0.991308004 8 34 361 0.768115942 0.87917783 0 0.4 0.608695652 45 10 6 53 2L:14327782-14327860 6 49 103 FBgn0261563 1083 12.21333333 18.64 0.045244691 4.012008734 2.628755365 1 1 1 0.25 dme-miR-282-5p 6mer2-7 GAGGCT 2L 14345435 14345440 + 2L_14345435_14345440_+ 0.948760776 0.967745618 0.958253197 0.013424281 CG33090 FBtr0343673|FBtr0343675|FBtr0080624|FBtr0343674 14345339|14345339|14345339|14345339 14345795|14345795|14345790|14345790 2L + 14345416 14345485 3'utr CG33090 FlyBase G4608.1 TTAGTTCGATTCTTCTTTTGAGGCTGAATGTGTAACGAGCTTATCGAGATGGTGCGAGTCGAGGAAGATG 33 14345434 0.911428974 3 33 274 1 1.591064607 0.512820513 0.181818182 0.307692308 33 0 0 39 2L:14345416-14345485 6 CG33090 FBtr0343674|FBtr0080624|FBtr0343675|FBtr0343673 14345339|14345339|14345339|14345339 14345790|14345790|14345795|14345795 GAGGCT 6mer2-7 dme-miR-282-5p 2L + 14345394 14345483 3'utr CG33090 FlyBase G3578.1 AGCACAAAGATTTTCTTAGCGTTTAGTTCGATTCTTCTTTTGAGGCTGAATGTGTAACGAGCTTATCGAGATGGTGCGAGTCGAGGAAGA 40 14345434 0.987651497 8 38 336 0.984375 1.498310554 0.59375 0.375 0.609375 40 0 1 63 2L:14345394-14345483 6 27.5 104 FBgn0028916 435.3333333 15.55666667 24.00333333 0.063169985 1.767730876 1.145674212 1 1 1 0.25 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2L 14345611 14345616 + 2L_14345611_14345616_+ 0.704208023 0.62077409 0.662491056 0.058996676 CG33090 FBtr0343673|FBtr0343675|FBtr0080624|FBtr0343674 14345339|14345339|14345339|14345339 14345795|14345795|14345790|14345790 2L + 14345575 14345676 3'utr CG33090 FlyBase G4610.1 TTTAAAGCCAGTCACAAATCAAACTGCTACTCTCTGTTGAAGTACAACTACGCAATGGTATTCAAATGGAGCACAAGTCGTATTTAGATGTTAGCTAAGAGA 18 14345612 0.973984384 10 18 113 1 1.342422681 0.272727273 0.166666667 0.318181818 18 0 0 22 2L:14345575-14345676 6 CG33090 FBtr0343674|FBtr0080624|FBtr0343675|FBtr0343673 14345339|14345339|14345339|14345339 14345790|14345790|14345795|14345795 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2L + 14345562 14345626 3'utr CG33090 FlyBase G3580.1 TGTCTTCTCTAGCTTTAAAGCCAGTCACAAATCAAACTGCTACTCTCTGTTGAAGTACAACTACG 6 14345612 0.983750357 4 4 32 0.8 0.903089987 0.5 0.333333333 0.6 6 2 0 8 2L:14345562-14345626 6 6 105 FBgn0028916 435.3333333 15.55666667 24.00333333 0.013782542 0.385686737 0.249965283 -1 -1 -1 0.25 dme-miR-988-3p 6mer3-8 ACAAGG 2L 14365390 14365395 + 2L_14365390_14365395_+ 0.990531376 0.999998968 0.995265172 0.006694604 spel1 FBtr0309281|FBtr0080630 14365229|14365229 14366840|14365568 2L + 14365340 14365416 5'utr spel1 FlyBase G4638.1 ACTGAATATTGCTCATCCATGGTTACAAACCATATTCTCCTGATTTGATTACAAGGCTACATCGAAAATGTTGTTTA 22 14365374 0.83156888 9 20 174 0.92 1.361727836 0.28 0.136363636 0.24 22 2 0 23 2L:14365340-14365416 6 spel1 FBtr0080630|FBtr0309281 14365229|14365229 14365568|14366840 ACAAGG 6mer3-8 dme-miR-988-3p 2L + 14365340 14365401 5'utr spel1 FlyBase G3596.1 ACTGAATATTGCTCATCCATGGTTACAAACCATATTCTCCTGATTTGATTACAAGGCTACAT 11 14365374 0.979894701 6 10 78 1 1.301029996 0.1 0.636363636 0.8 11 0 0 20 2L:14365340-14365401 6 4 106 FBgn0015546 654.7233333 24.05333333 36.85 0.006109451 0.166297118 0.108548168 16 16 16 0.25 dme-miR-317-3p 8mer-A1 TGTGTTCA 2L 15011511 15011518 + 2L_15011511_15011518_+ 0.624963424 0.626770874 0.625867149 0.001278096 l(2)35Bd FBtr0080696 15011357 15011764 2L + 15011502 15011532 3'utr l(2)35Bd FlyBase G4656.1 ATGTTTGTTTGTGTTCATAGGTTTCAATTCA 45 15011510 0.73910665 3 45 557 1 1.698970004 0.08 0.111111111 0.2 45 0 0 50 2L:15011502-15011532 8 l(2)35Bd FBtr0080696 15011357 15011764 TGTGTTCA 8mer-A1 dme-miR-317-3p 2L + 15011500 15011531 3'utr l(2)35Bd FlyBase G3606.1 GTATGTTTGTTTGTGTTCATAGGTTTCAATTC 31 15011510 0.725946935 4 31 379 1 1.72427587 0.037735849 0.483870968 0.698113208 31 0 0 53 2L:15011500-15011531 8 38 107 FBgn0001974 148.6633333 10.34 15.90666667 0.255611112 3.675048356 2.388935457 1 1 1 0.25 dme-miR-1002-5p 6mer3-8 CTACTT 2L 15063436 15063441 - 2L_15063436_15063441_- 0.865406379 0.815952341 0.84067936 0.034969329 vig FBtr0080718|FBtr0080721 15062929|15062929 15064433|15064433 2L - 15063406 15063456 3'utr vig FlyBase G10759.1 TATGCATCATATATACTACTTTTAATTATAAATACCTAACTGAACTTACAC 9 15063443 0.994900684 4 8 108 0.9 0.954242509 0.2 0.111111111 0.2 9 1 0 9 2L:15063406-15063456 6 vig FBtr0080721|FBtr0080718 15062929|15062929 15064433|15064433 CTACTT 6mer3-8 dme-miR-1002-5p 2L - 15063407 15063460 3'utr vig FlyBase G8289.1 GGACTATGCATCATATATACTACTTTTAATTATAAATACCTAACTGAACTTACA 7 15063445 0.815062517 5 6 51 0.888888889 0.903089987 0.555555556 0.142857143 0.333333333 7 1 0 8 2L:15063407-15063460 6 6 108 FBgn0024183 3911.293333 182.2033333 280.32 0.001534019 0.032930243 0.02140411 2 4 3 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2L 15064064 15064070 - 2L_15064064_15064070_- 0.822773376 0.818864483 0.82081893 0.00276401 vig FBtr0080718|FBtr0080721 15062929|15062929 15064433|15064433 2L - 15064044 15064091 3'utr vig FlyBase G10763.1 AAGCAAGTGACCTCGTGTAAACTAGTCAGTGTCAGGCTAAGTTATCCT 10 15064069 0.795443369 5 10 62 1 1.079181246 0 0.2 0.333333333 10 0 0 12 2L:15064044-15064091 7 vig FBtr0080721|FBtr0080718 15062929|15062929 15064433|15064433 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 15064049 15064099 3'utr vig FlyBase G8290.1 TCGCGATCAAGCAAGTGACCTCGTGTAAACTAGTCAGTGTCAGGCTAAGTT 9 15064062 0.930467197 4 7 54 0.846153846 1.041392685 0.307692308 0.222222222 0.461538462 9 2 0 11 2L:15064049-15064099 7 8.5 109 FBgn0024183 3911.293333 182.2033333 280.32 0.002173194 0.046651177 0.030322489 -1 -8 -4.5 0.25 dme-miR-1012-3p 7mer-A1 TGACTAA 2L 15504068 15504074 + 2L_15504068_15504074_+ 0.810359289 0.823343808 0.816851549 0.009181428 lace FBtr0343735|FBtr0080738 15503914|15503914 15504591|15505018 2L + 15503931 15504149 3'utr lace FlyBase G4694.1 CATAGAAGTTAAGCTTGGGGAAATGGTAACCTCCCCGATTGGTAAACCAAAACTACAACACAGTCCAGATAGTGCTAAATCAATCACGAACGGTGGCTTACATTGACCAAGTTTCAGTTGCACTGGGCTTCTATTTATGACTAATTCTCTGGTTATATGCCTTAAAAGGGAAGATCACTACAGCAACAGAAACAAAACACTACAGCACATAGCTTAAAT 64 15504080 0.98263667 26 61 453 0.961038961 1.568201724 0.155844156 0.171875 0.311688312 64 2 1 74 2L:15503931-15504149 7 lace FBtr0343735|FBtr0080738 15503914|15503914 15504591|15505018 TGACTAA 7mer-A1 dme-miR-1012-3p 2L + 15503926 15504103 3'utr lace FlyBase G3637.1 ACACACATAGAAGTTAAGCTTGGGGAAATGGTAACCTCCCCGATTGGTAAACCAAAACTACAACACAGTCCAGATAGTGCTAAATCAATCACGAACGGTGGCTTACATTGACCAAGTTTCAGTTGCACTGGGCTTCTATTTATGACTAATTCTCTGGTTATATGCCTTAAAAGGGAAG 33 15504046 0.853527746 24 33 196 1 1.672097858 0.14893617 0.363636364 0.553191489 33 0 0 47 2L:15503926-15504103 7 12 110 FBgn0002524 4527.636667 202.88 309.75 0.002650389 0.059148265 0.03874092 -12 22 5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 15646806 15646811 - 2L_15646806_15646811_- 0.700554857 0.546200876 0.623377867 0.10914476 CG4587 FBtr0344778|FBtr0344778|FBtr0344778|FBtr0344775|FBtr0344775|FBtr0344775|FBtr0344773|FBtr0344773|FBtr0344773|FBtr0344774|FBtr0344774|FBtr0344774|FBtr0344776|FBtr0344776|FBtr0344776|FBtr0344777|FBtr0344777|FBtr0344777|FBtr0344779|FBtr0344779|FBtr0344779|FBtr0344780|FBtr0344780|FBtr0344780 15644181|15644181|15644181|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15644181|15644181|15644181|15646334|15646334|15646334|15646334|15646334|15646334 15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834 2L - 15646799 15646840 3'utr CG4587 FlyBase G10811.1 TGTAATCGTTCTAATTATTTTAGACTATACTGTGAGTTCTTT 10 15646804 0.985825752 2 9 85 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 2L:15646799-15646840 6 CG4587 FBtr0344779|FBtr0344779|FBtr0344779|FBtr0344780|FBtr0344780|FBtr0344780|FBtr0344776|FBtr0344776|FBtr0344776|FBtr0344777|FBtr0344777|FBtr0344777|FBtr0344773|FBtr0344773|FBtr0344773|FBtr0344774|FBtr0344774|FBtr0344774|FBtr0344778|FBtr0344778|FBtr0344778|FBtr0344775|FBtr0344775|FBtr0344775 15646334|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15646334|15644181|15644181|15644181|15646334|15646334|15646334|15646334|15646334|15646334|15644181|15644181|15644181|15646334|15646334|15646334 15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 15646777 15646822 3'utr CG4587 FlyBase G8318.1 TTTAGACTATACTGTGAGTTCTTTACGTTTCCTTTGTTAACTTATT 6 15646804 0.988047964 3 6 57 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 2L:15646777-15646822 6 7 111 FBgn0028863 451.99 9.723333333 14.98333333 0.015487068 0.719917724 0.467185762 -7 -7 -7 0.25 dme-miR-14-3p 6mer3-8 AAGACT 2L 15647128 15647133 - 2L_15647128_15647133_- 0.998057894 0.624739409 0.811398651 0.263976043 CG4587 FBtr0344778|FBtr0344775|FBtr0344773|FBtr0344774|FBtr0344776|FBtr0344777|FBtr0344779|FBtr0344780 15644181|15646334|15646334|15646334|15646334|15644181|15646334|15646334 15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834 2L - 15647112 15647146 3'utr CG4587 FlyBase G10812.1 ACTGAACAAATGGAAGACTTGAAATACCCGACAGC 5 15647122 0.903427731 2 4 20 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2L:15647112-15647146 6 CG4587 FBtr0344779|FBtr0344780|FBtr0344776|FBtr0344777|FBtr0344773|FBtr0344774|FBtr0344778|FBtr0344775 15646334|15646334|15646334|15644181|15646334|15646334|15644181|15646334 15647834|15647834|15647834|15647834|15647834|15647834|15647834|15647834 AAGACT 6mer3-8 dme-miR-14-3p 2L - 15647122 15647172 3'utr CG4587 FlyBase G8319.1 TTTACAACCAAAACTAAATCGAATTCACTGAACAAATGGAAGACTTGAAAT 6 15647136 0.94121709 3 5 26 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 2L:15647122-15647172 6 4.5 112 FBgn0028863 451.99 9.723333333 14.98333333 0.009955972 0.462804251 0.300333704 -11 3 -4 0.25 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 15727656 15727663 - 2L_15727656_15727663_- 0.621994089 0.62154897 0.62177153 0.000314733 CycE FBtr0080777|FBtr0080776|FBtr0080773 15727579|15727579|15727579 15728880|15728880|15728880 2L - 15727607 15727688 3'utr CycE FlyBase G10821.1 ATTTAATTTTAAATAATTTCAGAACTACGCTTATATCCATGATTTGATGTTAATAAATAAACGATCGCAAAATCGTAAACTA 23 15727663 0.975729288 8 23 158 1 1.544068044 0.028571429 0.391304348 0.6 23 0 0 35 2L:15727607-15727688 8 CycE FBtr0080776|FBtr0080773|FBtr0080777 15727579|15727579|15727579 15728880|15728880|15728880 TACGCTTA 8mer-A1 dme-miR-965-3p 2L - 15727638 15727674 3'utr CycE FlyBase G8325.1 AATTTCAGAACTACGCTTATATCCATGATTTGATGTT 9 15727663 0.960119302 4 8 60 1 0.954242509 0.111111111 0 0 9 0 0 9 2L:15727638-15727674 8 14 113 FBgn0010382 855.2666667 26.80666667 41.17666667 0.016369164 0.522258145 0.339998381 0 0 0 0.25 dme-miR-317-3p 7mer-A1 GTGTTCA 2L 15727818 15727824 - 2L_15727818_15727824_- 0.822334388 0.823349539 0.822841963 0.000717784 CycE FBtr0080775|FBtr0080777|FBtr0080774|FBtr0080776|FBtr0305561|FBtr0080773 15727782|15727579|15727782|15727579|15727782|15727579 15728880|15728880|15728880|15728880|15728880|15728880 2L - 15727797 15727852 3'utr CycE FlyBase G10822.1 CGTTAGCTTAGGCATAAATAACATGTAAGTGTTCATACGATTAAGGCTGGATTGAA 14 15727813 0.67459831 7 11 88 0.8125 0.812913357 0.0625 0.142857143 0.25 14 2 1 13 2L:15727797-15727852 7 CycE FBtr0080774|FBtr0080776|FBtr0305561|FBtr0080773|FBtr0080775|FBtr0080777 15727782|15727579|15727782|15727579|15727782|15727579 15728880|15728880|15728880|15728880|15728880|15728880 GTGTTCA 7mer-A1 dme-miR-317-3p 2L - 15727799 15727843 3'utr CycE FlyBase G8326.1 AGGCATAAATAACATGTAAGTGTTCATACGATTAAGGCTGGATTG 20 15727828 0.791528631 8 13 140 0.68 1.230448921 0.24 0.2 0.36 20 8 0 17 2L:15727799-15727843 7 15 114 FBgn0010382 855.2666667 26.80666667 41.17666667 0.01753839 0.559562298 0.36428398 -11 4 -3.5 0.25 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 2L 1594849 1594856 - 2L_1594849_1594856_- 0.620182862 0.567410393 0.593796628 0.037315793 CG31935 FBtr0077916 1594820 1595042 2L - 1594845 1594882 3'utr CG31935 FlyBase G6814.1 AATCATGCTACTCAAATTGGTGTTATTGGTGCTATGCA 48 1594857 0.784968798 6 47 417 0.982758621 1.755874856 0.224137931 0.145833333 0.293103448 48 1 0 57 2L:1594845-1594882 8 CG31935 FBtr0077916 1594820 1595042 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 2L - 1594845 1594878 3'utr CG31935 FlyBase G5325.1 ATGCTACTCAAATTGGTGTTATTGGTGCTATGCA 31 1594857 0.666701911 2 27 256 0.886363636 0.892094603 0.25 0.290322581 0.5 31 1 4 39 2L:1594845-1594878 8 39 115 FBgn0051935 254.24 10.08666667 15.46333333 0.153398364 3.866490416 2.522095279 1 1 1 0.25 dme-miR-252-5p 8mer-m1 GTACTTAG 2L 16040344 16040351 + 2L_16040344_16040351_+ 0.541435639 0.530789108 0.536112374 0.007528212 beat-Ic FBtr0343727|FBtr0080801|FBtr0343726 16039529|16039529|16039529 16041703|16040407|16041703 2L + 16040319 16040374 3'utr beat-Ic FlyBase G4730.1 GTGCTCAGTCACTGAAAATCAAAATGTACTTAGAATAAATACTATGTACTTCAAAC 11 16040343 0.96332242 3 10 64 1 1.041392685 0 0 0 11 0 0 11 2L:16040319-16040374 8 beat-Ic FBtr0343726|FBtr0080801|FBtr0343727 16039529|16039529|16039529 16041703|16040407|16041703 GTACTTAG 8mer-m1 dme-miR-252-5p 2L + 16040330 16040376 3'utr beat-Ic FlyBase G3665.1 CTGAAAATCAAAATGTACTTAGAATAAATACTATGTACTTCAAACTC 6 16040343 0.974847067 2 6 36 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2L:16040330-16040376 8 7 116 FBgn0028644 8.996666667 0.243333333 0.383333333 0.77806595 28.76712329 18.26086957 1 1 1 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 16246491 16246498 - 2L_16246491_16246498_- 0.380072823 0.389176599 0.384624711 0.006437359 PRL-1 FBtr0332358|FBtr0080856|FBtr0080857|FBtr0332357 16245833|16245833|16245833|16245833 16247074|16247074|16247074|16247074 2L - 16246386 16246523 3'utr PRL-1 FlyBase G10854.1 CATCTATATTCTAAAACTGTAAAATGTACTTAATCGCATATTAGTTTGAAGCTCAGCCCTCAAAAATTTGCATTATTTATATTTTGTTTTTTATCTTCTTTTCACTTCGTCCACTTTTCGCTATCAATGGGTGAAGGC 216 16246499 0.982459859 10 214 1606 0.988549618 2.413299764 0.053435115 0.171296296 0.316793893 216 3 0 259 2L:16246386-16246523 8 PRL-1 FBtr0332357|FBtr0080857|FBtr0080856|FBtr0332358 16245833|16245833|16245833|16245833 16247074|16247074|16247074|16247074 GTACTTAA 8mer-A1 dme-miR-252-5p 2L - 16246462 16246519 3'utr PRL-1 FlyBase G8350.1 TATATTCTAAAACTGTAAAATGTACTTAATCGCATATTAGTTTGAAGCTCAGCCCTCA 153 16246499 0.972799835 4 149 1111 0.980952381 1.836745966 0.052380952 0.274509804 0.471428571 153 2 2 206 2L:16246462-16246519 8 178 117 FBgn0024734 9266.433333 401.94 617.5566667 0.019209117 0.442852167 0.288232659 1 1 1 0.25 dme-miR-278-3p 6mer3-8 CCCACC 2L 16247046 16247051 - 2L_16247046_16247051_- 0.876471928 0.903342319 0.889907124 0.019000242 PRL-1 FBtr0332358|FBtr0080856|FBtr0080857|FBtr0332357 16245833|16245833|16245833|16245833 16247074|16247074|16247074|16247074 2L - 16246892 16247134 stop_codon PRL-1 FlyBase G10856.1 AAGCCAAAGGCGAGACTAAAGCACAAAAATGGTCATAAGAATTCATGTTCTGTGCAATAGATTTCCAACACCATATGTATATTCCCACCAGACAAAAAGTGTTCATTTTTTCAAAAACAAAAAAAAAAAATGCAAGCGGATAGAAAAGCGCATACACAAATATGAATTGATAGGCAGCAATCCGTAAAATTGAACTAACCACAGAGAGCCCAAAAATATGGAAGGAGAAATTGAGTTACAGCC 175 16247053 0.98599814 31 153 1335 0.874371859 1.939519253 0.08040201 0.125714286 0.231155779 175 24 1 174 2L:16246892-16247134 6 PRL-1 FBtr0332357|FBtr0080857|FBtr0080856|FBtr0332358 16245833|16245833|16245833|16245833 16247074|16247074|16247074|16247074 CCCACC 6mer3-8 dme-miR-278-3p 2L - 16247021 16247177 stop_codon PRL-1 FlyBase G8352.1 CGGAGCCATTAATGCCAAGCAGCTGTCCTTTTTGGAAAAATACAAGCCAAAGGCGAGACTAAAGCACAAAAATGGTCATAAGAATTCATGTTCTGTGCAATAGATTTCCAACACCATATGTATATTCCCACCAGACAAAAAGTGTTCATTTTTTCAA 131 16247053 0.952278126 24 105 1068 0.811428571 1.374137094 0.137142857 0.27480916 0.457142857 131 28 5 142 2L:16247021-16247177 6 114.5 118 FBgn0024734 9266.433333 401.94 617.5566667 0.012356426 0.284868388 0.185408087 2 2 2 0.25 dme-miR-307a-3p 7mer-A1 GTTGTGA 2L 16260057 16260063 - 2L_16260057_16260063_- 0.60332433 0.638255044 0.620789687 0.024699735 twe FBtr0331445|FBtr0331444|FBtr0080855|FBtr0331446 16259412|16259875|16259412|16259875 16260224|16260224|16260224|16260224 2L - 16260045 16260091 3'utr twe FlyBase G10871.1 GGTTCATTTCTTGTTGCGTTGTTCAAATGTTGTGAAAGCACTTTATA 19 16260062 0.984895325 4 19 164 1 1.361727836 0.652173913 0.210526316 0.347826087 19 0 0 23 2L:16260045-16260091 7 twe FBtr0080855|FBtr0331446|FBtr0331445|FBtr0331444 16259412|16259875|16259412|16259875 16260224|16260224|16260224|16260224 GTTGTGA 7mer-A1 dme-miR-307a-3p 2L - 16260042 16260076 3'utr twe FlyBase G8366.1 GCGTTGTTCAAATGTTGTGAAAGCACTTTATATTT 10 16260062 0.677341797 4 10 74 1 1.255272505 0.722222222 0.6 0.777777778 10 0 0 18 2L:16260042-16260076 7 14.5 119 FBgn0002673 160.84 8.683333333 13.39 0.090151704 1.669865643 1.082897685 -1 -1 -1 0.25 dme-miR-305-5p 7mer-A1 GTACAAA 2L 16290916 16290922 + 2L_16290916_16290922_+ 0.781864239 0.780796508 0.781330373 0.000754978 pkaap FBtr0080826 16290778 16291195 2L + 16290875 16290957 3'utr pkaap FlyBase G4749.1 AGAAGTCGCAACAGAAGCTCTCTCTAGTACCCTCTCCTTATGTACAAATTGTGTTGAACAAATCAAATACTTTACTTTAACTT 30 16290914 0.98682668 10 29 249 0.972972973 1.255272505 0.081081081 0.166666667 0.324324324 30 0 1 36 2L:16290875-16290957 7 pkaap FBtr0080826 16290778 16291195 GTACAAA 7mer-A1 dme-miR-305-5p 2L + 16290878 16290942 3'utr pkaap FlyBase G3682.1 AGTCGCAACAGAAGCTCTCTCTAGTACCCTCTCCTTATGTACAAATTGTGTTGAACAAATCAAAT 31 16290914 0.98586447 9 30 254 0.976190476 1.311753861 0.357142857 0.258064516 0.452380952 31 0 1 41 2L:16290878-16290942 7 26.5 120 FBgn0040079 291.3133333 14.45 22.03666667 0.090967343 1.833910035 1.202541219 2 2 2 0.25 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 16296371 16296378 - 2L_16296371_16296378_- 0.602008195 0.548170152 0.575089173 0.038069215 heix FBtr0080852 16296049 16297554 2L - 16296364 16296398 3'utr heix FlyBase G10902.1 AGCGTATGCATATAAACAAATAGCTTTAAATAACA 8 16296378 0.865181327 2 6 49 0.75 0.77815125 0 0 0 8 2 0 6 2L:16296364-16296398 8 heix FBtr0080852 16296049 16297554 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 16296360 16296401 3'utr heix FlyBase G8388.1 AATAGCGTATGCATATAAACAAATAGCTTTAAATAACAAACA 10 16296378 0.902756392 2 9 55 0.909090909 0.698970004 0 0.1 0.181818182 10 0 1 10 2L:16296360-16296401 8 9 121 FBgn0028375 808.1233333 31.42 48.33666667 0.011136914 0.286441757 0.186194056 0 0 0 0.25 dme-miR-190-5p 7mer-m8 ACATATC 2L 16297344 16297350 - 2L_16297344_16297350_- 0.665553787 0.446900028 0.556226908 0.154611585 heix FBtr0080852 16296049 16297554 2L - 16297328 16297398 3'utr heix FlyBase G10905.1 ATTTCGAATGCTGCTAGTCGCCCGTTTGATTCTAAACTTTTGAACTGAACATATCCTAGCCCTAATGGGTC 15 16297342 0.864212075 6 15 92 1 1.278753601 0.052631579 0.266666667 0.421052632 15 0 0 19 2L:16297328-16297398 7 heix FBtr0080852 16296049 16297554 ACATATC 7mer-m8 dme-miR-190-5p 2L - 16297326 16297387 3'utr heix FlyBase G8390.1 TGCTAGTCGCCCGTTTGATTCTAAACTTTTGAACTGAACATATCCTAGCCCTAATGGGTCGA 9 16297343 0.820352521 4 7 65 1 1.204119983 0.0625 0.555555556 0.75 9 0 0 16 2L:16297326-16297387 7 8.5 122 FBgn0028375 808.1233333 31.42 48.33666667 0.010518196 0.270528326 0.175849941 -8 -7 -7.5 0.25 dme-miR-92b-3p 7mer-m8 GTGCAAT 2L 16297495 16297501 - 2L_16297495_16297501_- 0.657755363 0.636666671 0.647211017 0.014911963 heix FBtr0080852 16296049 16297554 2L - 16297455 16297520 3'utr heix FlyBase G10906.1 CTGAATCAGTGAGAACCTGGTGCAATGTTTTAGGGAATTTCATTAGGTTTTAGTCAATGTGAGTAA 12 16297502 0.980502958 7 10 76 0.833333333 0.698970004 0.333333333 0 0 12 1 1 10 2L:16297455-16297520 7 heix FBtr0080852 16296049 16297554 GTGCAAT 7mer-m8 dme-miR-92b-3p 2L - 16297499 16297549 3'utr heix FlyBase G8391.1 GGGTTAAACGTACGGATCTGGCGGAAAATCTGAATCAGTGAGAACCTGGTG 5 16297518 0.973126781 3 3 27 0.833333333 0.698970004 0.166666667 0.2 0.333333333 5 1 0 5 2L:16297499-16297549 2 5 123 FBgn0028375 808.1233333 31.42 48.33666667 0.006187174 0.159134309 0.103441142 1 17 9 0.25 dme-miR-31a-5p 7mer-A1 CTTGCCA 2L 16301756 16301762 - 2L_16301756_16301762_- 0.767389095 0.64122789 0.704308492 0.08920944 CG5869 FBtr0080851 16301654 16302076 2L - 16301720 16301781 3'utr CG5869 FlyBase G10913.1 AATCTTAATAGAAGCTGTGCTTGCCAAATTTCTACATGTATTTATTGTAAAGATATAAAAGC 16 16301760 0.723374332 9 16 117 1 1.397940009 0.04 0.375 0.6 16 0 0 25 2L:16301720-16301781 7 CG5869 FBtr0080851 16301654 16302076 CTTGCCA 7mer-A1 dme-miR-31a-5p 2L - 16301741 16301819 3'utr CG5869 FlyBase G8394.1 GGAGTTTTTAGTGATTTTAGTTCTTGCATTTAAGTAATAATCTTAATAGAAGCTGTGCTTGCCAAATTTCTACATGTAT 14 16301760 0.772567062 7 14 130 1 1.342422681 0.181818182 0.428571429 0.636363636 14 0 0 22 2L:16301741-16301819 7 10 124 FBgn0028894 1010.62 123.5733333 189.1366667 0.009894916 0.080923608 0.052871821 -2 -2 -2 0.25 dme-miR-304-5p 7mer-m8 TGAGATT 2L 16305881 16305887 - 2L_16305881_16305887_- 0.440649823 0.619118647 0.529884235 0.126196499 CG5861 FBtr0080850 16305799 16305958 2L - 16305848 16305907 3'utr CG5861 FlyBase G10918.1 TTTGGTGTTGTCAGAGAAATTGAGATTTTGTAACAAAGACAACAATTACGGTTTAGAGAA 19 16305887 0.826703406 6 18 135 1 1.431363764 0.37037037 0.315789474 0.518518519 19 0 0 27 2L:16305848-16305907 7 CG5861 FBtr0080850 16305799 16305958 TGAGATT 7mer-m8 dme-miR-304-5p 2L - 16305874 16305904 3'utr CG5861 FlyBase G8398.1 GGTGTTGTCAGAGAAATTGAGATTTTGTAAC 5 16305888 0.800498582 2 5 45 1 0.84509804 0.571428571 0.4 0.571428571 5 0 0 7 2L:16305874-16305904 7 9.5 125 FBgn0015338 312.2366667 33.98666667 51.41 0.030425639 0.279521381 0.184788952 0 1 0.5 0.25 dme-bantam-3p 7mer-A1 GATCTCA 2L 16309879 16309885 - 2L_16309879_16309885_- 0.821913635 0.610793046 0.71635334 0.149284808 cni FBtr0080848|FBtr0080849|FBtr0337082 16309594|16309594|16309290 16309902|16309902|16309902 2L - 16309857 16309924 stop_codon cni FlyBase G10926.1 TTATTCGCTCATCTCGACATAGGCAAGCTCTTGCCTGGGGATCTCAGTGTTGGCGCCAACGCATCAGC 32 16309877 0.98253826 7 29 219 0.891891892 1.51851394 0.081081081 0.15625 0.27027027 32 4 0 33 2L:16309857-16309924 7 cni FBtr0080849|FBtr0337082|FBtr0080848 16309594|16309290|16309594 16309902|16309902|16309902 GATCTCA 7mer-A1 dme-bantam-3p 2L - 16309861 16309919 stop_codon cni FlyBase G8402.1 CGCTCATCTCGACATAGGCAAGCTCTTGCCTGGGGATCTCAGTGTTGGCGCCAACGCAT 33 16309877 0.919761546 5 31 218 0.962962963 1.414973348 0.018518519 0.545454545 0.722222222 33 1 1 52 2L:16309861-16309919 7 28 126 FBgn0000339 410.67 56.70333333 85.98333333 0.068181265 0.493798131 0.325644505 -8 -8 -8 0.25 dme-miR-305-3p 7mer-m8 ATGTGCC 2L 16312998 16313004 + 2L_16312998_16313004_+ 0.667825714 0.674504225 0.671164969 0.004722413 fzy FBtr0080833 16312826 16313097 2L + 16312976 16313019 3'utr fzy FlyBase G4772.1 AATTACGGATAAATCTCTGATTATGTGCCCCCGCCGACGATATA 7 16312992 0.979340395 4 6 46 0.888888889 0.903089987 0.222222222 0.142857143 0.333333333 7 1 0 8 2L:16312976-16313019 7 fzy FBtr0080833 16312826 16313097 ATGTGCC 7mer-m8 dme-miR-305-3p 2L + 16312969 16313021 3'utr fzy FlyBase G3699.1 ACTTTGTAATTACGGATAAATCTCTGATTATGTGCCCCCGCCGACGATATATG 8 16312994 0.972907743 6 7 45 1 0.954242509 0.333333333 0.125 0.222222222 8 0 0 9 2L:16312969-16313021 7 5.5 127 FBgn0001086 1113.016667 67.49 102.82 0.004941525 0.081493555 0.053491539 6 4 5 0.25 dme-miR-252-5p 7mer-m8 GTACTTA 2L 16313186 16313192 - 2L_16313186_16313192_- 0.502060555 0.41465945 0.458360002 0.061801981 cact FBtr0337081|FBtr0080844|FBtr0080845|FBtr0080847 16313095|16313095|16313034|16313095 16313378|16313378|16313378|16313378 2L - 16313141 16313216 3'utr cact FlyBase G10928.1 TGCATCCAGGAAATGGAACCTTATGTACTTACTGTCCCGGCACGTGGGAATCCGAAACGAATAGAATTCCTTGTGT 120 16313193 0.983688937 6 118 919 0.985815603 2.1430148 0.14893617 0.166666667 0.290780142 120 2 0 139 2L:16313141-16313216 7 cact FBtr0080847|FBtr0337081|FBtr0080844|FBtr0080845 16313095|16313095|16313095|16313034 16313378|16313378|16313378|16313378 GTACTTA 7mer-m8 dme-miR-252-5p 2L - 16313166 16313209 3'utr cact FlyBase G8404.1 AGGAAATGGAACCTTATGTACTTACTGTCCCGGCACGTGGGAAT 68 16313193 0.723457135 4 64 523 0.949494949 1.973127854 0.212121212 0.352941176 0.555555556 68 5 0 94 2L:16313166-16313209 7 92 128 FBgn0000250 1526.01 89.34 137.2866667 0.06028794 1.029773897 0.670130627 1 1 1 0.25 dme-miR-184-3p 6mer2-7 CCGTCC 2L 16354263 16354268 + 2L_16354263_16354268_+ 0.976137721 0.978171592 0.977154656 0.001438184 CG4455 FBtr0080836 16353552 16354539 2L + 16354168 16354436 3'utr CG4455 FlyBase G4781.1 ACGCAACCCAATTTGCATTAAGAATCCGAATCGTACTAACAGACGAACTCTTCGTGATGCCTCGAATTTTGCACTACATTTTAAAACGCCGATTCCCGTCCCTTTATATACACAGGTTGTACTTAAATCGAAACCAAGTACTTAATAATTGTACCATGCCAATCATAGTTTAAGCGCCAATCTGCCGCCACGAATACATTTAAGAAATCTTCAGTTTGTGCATTTAGACCAGCATGAGTATCCTTCTATATATTGTGTCAAAAAAAACG 505 16354260 0.976422367 41 484 3115 0.953895072 1.93305321 0.06200318 0.194059406 0.352941176 505 23 6 600 2L:16354168-16354436 6 CG4455 FBtr0080836 16353552 16354539 CCGTCC 6mer2-7 dme-miR-184-3p 2L + 16354204 16354396 3'utr CG4455 FlyBase G3707.1 TAACAGACGAACTCTTCGTGATGCCTCGAATTTTGCACTACATTTTAAAACGCCGATTCCCGTCCCTTTATATACACAGGTTGTACTTAAATCGAAACCAAGTACTTAATAATTGTACCATGCCAATCATAGTTTAAGCGCCAATCTGCCGCCACGAATACATTTAAGAAATCTTCAGTTTGTGCATTTAGAC 352 16354260 0.914340584 26 330 2000 0.940839695 1.613665673 0.041984733 0.372159091 0.578244275 352 20 11 493 2L:16354204-16354396 6 303.5 129 FBgn0028506 237.38 18.83333333 28.63666667 1.278540736 16.11504425 10.59830055 3 3 3 0.25 dme-miR-304-5p 8mer-A1 TGAGATTA 2L 16400411 16400418 - 2L_16400411_16400418_- 0.624653097 0.625016599 0.624834848 0.000257033 CG5888 FBtr0340234|FBtr0080880 16400173|16400173 16400500|16400500 2L - 16400395 16400440 3'utr CG5888 FlyBase G10974.1 TAGCTTATTTCTGAGACTATAATGAGATTAAAATAGGCTGAAGCTA 102 16400407 0.811007327 10 90 550 0.889830508 1.176091259 0.355932203 0.12745098 0.245762712 102 7 6 105 2L:16400395-16400440 8 CG5888 FBtr0340234|FBtr0080880 16400173|16400173 16400500|16400500 TGAGATTA 8mer-A1 dme-miR-304-5p 2L - 16400395 16400440 3'utr CG5888 FlyBase G8437.1 TAGCTTATTTCTGAGACTATAATGAGATTAAAATAGGCTGAAGCTA 71 16400407 0.764266672 8 66 350 0.921568627 1.194976603 0.450980392 0.352112676 0.549019608 71 3 5 94 2L:16400395-16400440 8 82.5 130 FBgn0028523 337.3833333 21.57333333 32.72 0.244528973 3.824165637 2.521393643 -11 -11 -11 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 16508867 16508872 - 2L_16508867_16508872_- 0.99645003 0.999917915 0.998183973 0.002452176 CG5953 FBtr0337091 16508076 16510135 2L - 16508848 16508895 3'utr CG5953 FlyBase G10985.1 AAAAATATATAATATATATCATTGTACCTTATTTTGAAACAGAGATGT 37 16508873 0.93267216 6 35 410 0.957446809 1.352182518 0 0.216216216 0.382978723 37 1 1 45 2L:16508848-16508895 6 CG5953 FBtr0337091 16508076 16510135 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L - 16508845 16508893 3'utr CG5953 FlyBase G8448.1 AAATATATAATATATATCATTGTACCTTATTTTGAAACAGAGATGTTTT 18 16508873 0.696121129 3 18 203 1 1.380211242 0 0.277777778 0.458333333 18 0 0 24 2L:16508845-16508893 6 27 131 FBgn0032587 1367.886667 37.83 57.85 0.019738477 0.71371927 0.466724287 1 1 1 0.25 dme-miR-8-3p 8mer-A1 CAGTATTA 2L 16509284 16509291 - 2L_16509284_16509291_- 0.592736896 0.617862021 0.605299459 0.017766129 CG5953 FBtr0337091|FBtr0301144|FBtr0080874|FBtr0080873 16508076|16509118|16509118|16509118 16510135|16510135|16510135|16510135 2L - 16509203 16509310 3'utr CG5953 FlyBase G10987.1 CGTCTAACTAGCAGAATCTCAGTATTAACTATAAAATACACTTTACATAGGGATCCAAGCATTTGCCATAGATCGTTTCCTTTGGGGCCCGATCGTCCACTTCTGGGT 29 16509292 0.986117033 8 24 210 0.833333333 1.397940009 0.2 0.034482759 0.066666667 29 5 0 25 2L:16509203-16509310 8 CG5953 FBtr0080874|FBtr0080873|FBtr0337091|FBtr0301144 16509118|16509118|16508076|16509118 16510135|16510135|16510135|16510135 CAGTATTA 8mer-A1 dme-miR-8-3p 2L - 16509272 16509313 3'utr CG5953 FlyBase G8451.1 AGACGTCTAACTAGCAGAATCTCAGTATTAACTATAAAATAC 20 16509292 0.781826373 4 19 127 0.961538462 1.397940009 0.153846154 0.25 0.423076923 20 1 0 25 2L:16509272-16509313 8 18 132 FBgn0032587 1367.886667 37.83 57.85 0.013158985 0.475812847 0.311149525 1 1 1 0.25 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 16663038 16663043 + 2L_16663038_16663043_+ 0.621070471 0.792055345 0.706562908 0.120904512 CG42389 FBtr0335497 16661777 16663218 2L + 16663009 16663078 3'utr CG42389 FlyBase G4882.1 AATGTAATTGTTTCTTTCCATAGCATTTAATGTGAATTATACAAAACGGATTCTTATCTAAAAAACCAAG 32 16663021 0.860041263 9 30 305 0.947368421 1.255272505 0.289473684 0.125 0.263157895 32 1 1 36 2L:16663009-16663078 6 CG42389 FBtr0335497 16661777 16663218 ATGTGA 6mer3-8 dme-miR-1003-3p 2L + 16663014 16663075 3'utr CG42389 FlyBase G3801.1 AATTGTTTCTTTCCATAGCATTTAATGTGAATTATACAAAACGGATTCTTATCTAAAAAACC 15 16663020 0.874298366 8 15 127 1 1.342422681 0.045454545 0.4 0.590909091 15 0 0 22 2L:16663014-16663075 6 13.5 133 FBgn0259735 3930.076667 62.35333333 96.36 0.003435047 0.216508072 0.140099626 17 18 17.5 0.25 dme-miR-305-3p 6mer3-8 ATGTGC 2L 16699762 16699767 + 2L_16699762_16699767_+ 0.99994324 0.996268469 0.998105854 0.002598405 grp FBtr0080886|FBtr0100459|FBtr0080884|FBtr0339514|FBtr0080885 16699640|16699640|16699640|16699640|16699640 16699926|16699926|16699926|16699926|16699926 2L + 16699750 16699773 3'utr grp FlyBase G4915.1 CTAAAATTCTCAATGTGCTAACTT 5 16699757 0.769838117 2 4 37 0.8 0.602059991 0 0 0 5 1 0 4 2L:16699750-16699773 6 grp FBtr0080885|FBtr0080884|FBtr0339514|FBtr0080886|FBtr0100459 16699640|16699640|16699640|16699640|16699640 16699926|16699926|16699926|16699926|16699926 ATGTGC 6mer3-8 dme-miR-305-3p 2L + 16699751 16699786 3'utr grp FlyBase G3833.1 TAAAATTCTCAATGTGCTAACTTATTTTTAATTCAT 10 16699763 0.746083946 4 8 100 0.785714286 1.041392685 0 0.2 0.428571429 10 3 0 11 2L:16699751-16699786 6 7.5 134 FBgn0261278 1105.166667 59.92666667 91.90666667 0.006786307 0.125152965 0.081604526 5 -1 2 0.25 dme-miR-317-3p 7mer-m8 TGTGTTC 2L 16723429 16723435 - 2L_16723429_16723435_- 0.661558832 0.661470239 0.661514536 6.26E-05 VhaSFD FBtr0080942|FBtr0335143|FBtr0080941|FBtr0080940 16723230|16722881|16723230|16723230 16723992|16723818|16723818|16723818 2L - 16723356 16723576 3'utr VhaSFD FlyBase G11016.1 AAGTATTGAGAGAAAAATTCGATTTTTTGTTGGCATTCCAAAAAGCAATTCACTGTAATGGCAGAACAAATACAAGCAACTATCCTCTACAAATTGTTCCATTCAATTCGATTGTTTATATATTTTGTTGTTATTATTATTTGTGTTCTTAATTTTATGAGTGCGCCGCTGTACAGAGTTTTTCTAAACCAGATGATATGCGCTTCTTACGTTTATATAGT 35 16723436 0.991898932 15 34 375 0.953488372 1.612783857 0.209302326 0.171428571 0.325581395 35 2 0 41 2L:16723356-16723576 7 VhaSFD FBtr0080941|FBtr0080940|FBtr0080942|FBtr0335143 16723230|16723230|16723230|16722881 16723818|16723818|16723992|16723818 TGTGTTC 7mer-m8 dme-miR-317-3p 2L - 16723415 16723455 3'utr VhaSFD FlyBase G8476.1 ATTTTGTTGTTATTATTATTTGTGTTCTTAATTTTATGAGT 15 16723436 0.803846157 2 11 209 0.740740741 1.301029996 0.222222222 0.428571429 0.703703704 14 7 0 20 2L:16723415-16723455 7 15 135 FBgn0027779 484.9333333 25.11333333 38.29666667 0.030932087 0.597292275 0.391678997 1 1 1 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2L 16835168 16835174 - 2L_16835168_16835174_- 0.823349548 0.823072597 0.823211073 0.000195798 CG13283 FBtr0080928 16835134 16835259 2L - 16835142 16835202 3'utr CG13283 FlyBase G11085.1 AAAAAATAAAATGTATTGTTATATTTACCTAGTCATTGGAAATATACTTGTTATCAACATT 15 16835181 0.989186626 8 15 142 1 1.230448921 0.058823529 0.133333333 0.235294118 15 0 0 17 2L:16835142-16835202 7 CG13283 FBtr0080928 16835134 16835259 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 16835160 16835190 3'utr CG13283 FlyBase G8531.1 GTATTGTTATATTTACCTAGTCATTGGAAAT 9 16835179 0.623950934 5 9 86 1 1.041392685 0.545454545 0.111111111 0.272727273 9 0 0 11 2L:16835160-16835190 7 10.5 136 FBgn0032613 497 28.40666667 43.38333333 0.021126761 0.369631542 0.242028429 7 5 6 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 2L 16886094 16886100 + 2L_16886094_16886100_+ 0.52052967 0.520425919 0.520477794 7.34E-05 CG31743 FBtr0080947|FBtr0340171 16886024|16886024 16886319|16886319 2L + 16885959 16886149 stop_codon CG31743 FlyBase G4977.1 ATATGAGGATGACTTTCGACTCTTTGACTACGCACTGGACGAGGTACTCGGCTTTGAGTTTGGCTAATTGTGAATGAAAAGCTGCTCTCTCAATATCCCCAAGTCACCACCATAACGCTTTCCACTGGAAAAGATTGTGATTTTAGGCTAGGACTTGTAGATTTAGGTGCACTCCCATGCGAATATTATTT 581 16886093 0.933615634 31 559 4781 0.963358779 1.896939372 0.116030534 0.111876076 0.21221374 581 17 7 631 2L:16885959-16886149 7 CG31743 FBtr0340171|FBtr0080947 16886024|16886024 16886319|16886319 TGTGATT 7mer-m1 dme-miR-308-3p 2L + 16885957 16886139 stop_codon CG31743 FlyBase G3873.1 ATATATGAGGATGACTTTCGACTCTTTGACTACGCACTGGACGAGGTACTCGGCTTTGAGTTTGGCTAATTGTGAATGAAAAGCTGCTCTCTCAATATCCCCAAGTCACCACCATAACGCTTTCCACTGGAAAAGATTGTGATTTTAGGCTAGGACTTGTAGATTTAGGTGCACTCCCATGCG 388 16886093 0.986406284 31 366 3119 0.933913043 1.775731776 0.114782609 0.360824742 0.568695652 388 30 8 537 2L:16885957-16886139 7 411 137 FBgn0032618 47.81666667 2.756666667 4.25 8.595329383 149.0931076 96.70588235 1 1 1 0.25 dme-miR-1012-3p 6mer3-8 TTGACT 2L 16886197 16886202 + 2L_16886197_16886202_+ 0.618720443 0.585536782 0.602128612 0.023464349 CG31743 FBtr0080947|FBtr0340171 16886024|16886024 16886319|16886319 2L + 16886177 16886224 3'utr CG31743 FlyBase G4978.1 ACAAATGTTTCCAAGGGTTTTTGACTGTAAAACTTAGTTATAATCATT 104 16886197 0.708366811 9 94 983 0.898305085 1.72427587 0.008474576 0.125 0.228813559 104 11 1 106 2L:16886177-16886224 6 CG31743 FBtr0340171|FBtr0080947 16886024|16886024 16886319|16886319 TTGACT 6mer3-8 dme-miR-1012-3p 2L + 16886146 16886224 3'utr CG31743 FlyBase G3874.1 ATTTTTGTTCTGTATACATACCTTCCCGCGCACAAATGTTTCCAAGGGTTTTTGACTGTAAAACTTAGTTATAATCATT 89 16886197 0.671865876 12 75 777 0.854700855 1.15490196 0.034188034 0.280898876 0.452991453 89 11 6 100 2L:16886146-16886224 6 84 138 FBgn0032618 47.81666667 2.756666667 4.25 1.756709655 30.47158404 19.76470588 0 0 0 0.25 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 16916732 16916738 + 2L_16916732_16916738_+ 0.434426134 0.422754669 0.428590401 0.008252926 tweek FBtr0304930|FBtr0304927|FBtr0304929|FBtr0340173|FBtr0304928|FBtr0340172 16916563|16916563|16916563|16916563|16916563|16916563 16917052|16917052|16917052|16917052|16917052|16917052 2L + 16916659 16916803 3'utr tweek FlyBase G5007.1 TTTTTATTATTTATTACCCTGGTTGACCTAGCATGCTTTAAGATTGAAACTGGCGGTATTATGTGGCCAGTATGGCAGCTTCATATATAATGTAAATGGTTTGCTCTCGTTCCCCTTCTTTTTAAGCGTATCTGTATACTCTTTC 349 16916731 0.863210858 24 343 2201 0.986516854 2.341434525 0.042696629 0.220630372 0.388764045 349 5 1 439 2L:16916659-16916803 7 tweek FBtr0340172|FBtr0304928|FBtr0340173|FBtr0304929|FBtr0304927|FBtr0304930 16916563|16916563|16916563|16916563|16916563|16916563 16917052|16917052|16917052|16917052|16917052|16917052 GGCAGCT 7mer-m8 dme-miR-980-3p 2L + 16916656 16916756 3'utr tweek FlyBase G3896.1 AAGTTTTTATTATTTATTACCCTGGTTGACCTAGCATGCTTTAAGATTGAAACTGGCGGTATTATGTGGCCAGTATGGCAGCTTCATATATAATGTAAATG 220 16916731 0.974763009 16 208 1257 0.979228487 2.51851394 0.059347181 0.406392694 0.614243323 219 7 0 330 2L:16916656-16916756 7 254 139 FBgn0261671 3032.533333 22.31666667 34.24333333 0.083758354 11.38162808 7.41750219 1 1 1 0.25 dme-miR-92b-3p 6mer2-7 TGCAAT 2L 1698806 1698811 + 2L_1698806_1698811_+ 0.550412494 0.589940635 0.570176565 0.027950588 chinmo FBtr0307047 1696148 1704682 2L + 1698791 1698857 3'utr chinmo FlyBase G1051.1 ATCTAAGATCCAAAATGCAATGGAAAATATTGAGAAAATCTGCCAAGGCTAGCAAGTTCTTGGCCTG 11 1698806 0.963622621 7 10 54 0.923076923 1.079181246 0.384615385 0.181818182 0.307692308 11 1 0 12 2L:1698791-1698857 6 chinmo FBtr0307047 1696148 1704682 TGCAAT 6mer2-7 dme-miR-92b-3p 2L + 1698790 1698858 3'utr chinmo FlyBase G830.1 AATCTAAGATCCAAAATGCAATGGAAAATATTGAGAAAATCTGCCAAGGCTAGCAAGTTCTTGGCCTGT 8 1698808 0.935412167 6 8 32 1 1.255272505 0.277777778 0.625 0.833333333 8 0 0 18 2L:1698790-1698858 6 5.5 140 FBgn0086758 5795.003333 67.42333333 103.87 0.000949094 0.081574134 0.052950804 0 -2 -1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 1699298 1699305 + 2L_1699298_1699305_+ 0.64902377 0.649167239 0.649095504 0.000101399 chinmo FBtr0307047|FBtr0307047|FBtr0307047 1696148|1696148|1696148 1704682|1704682|1704682 2L + 1699255 1699336 3'utr chinmo FlyBase G1054.1 ATGCAGATGCAGACTACCAGTGTCACCCGATCCCCAGTTTGTTCTGTGATATCGTTTTCAAGTTGCAAGAACGAGTGGCGTT 87 1699296 0.989004859 13 76 838 0.834951456 1.457377197 0.223300971 0.149425287 0.281553398 87 15 2 86 2L:1699255-1699336 8 chinmo FBtr0307047|FBtr0307047|FBtr0307047 1696148|1696148|1696148 1704682|1704682|1704682 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 1699242 1699322 3'utr chinmo FlyBase G832.1 CTAACCATAGAAGATGCAGATGCAGACTACCAGTGTCACCCGATCCCCAGTTTGTTCTGTGATATCGTTTTCAAGTTGCAA 42 1699296 0.991286337 12 35 397 0.85 1.707570176 0.183333333 0.333333333 0.533333333 42 9 0 51 2L:1699242-1699322 8 58.5 141 FBgn0086758 5795.003333 67.42333333 103.87 0.010094904 0.867652148 0.563204005 2 2 2 0.25 dme-miR-79-3p 7mer-A1 AGCTTTA 2L 1700007 1700013 + 2L_1700007_1700013_+ 0.822734386 0.759335429 0.791034907 0.044829863 chinmo FBtr0307047 1696148 1704682 2L + 1699969 1700139 3'utr chinmo FlyBase G1057.2 ACCGAATGTTTCGCTGTAATCGAAGATGCTATCAAGAAAGCTTTAGTTCTTAGTTCGATTATCGGTTAGCTAGCTAGCTAGTGGCTAAGTGGCACCTAAGTTTAGTAGGAGGATTTAATTTTAAATGCAAAAGACACAATCACACACAATGAACACACAATAGCAATAATA 43 1700011 0.918129811 23 37 286 0.882352941 1.176091259 0.235294118 0.186046512 0.31372549 43 4 2 45 2L:1699969-1700139 7 chinmo FBtr0307047 1696148 1704682 AGCTTTA 7mer-A1 dme-miR-79-3p 2L + 1699974 1700066 3'utr chinmo FlyBase G836.1 ATGTTTCGCTGTAATCGAAGATGCTATCAAGAAAGCTTTAGTTCTTAGTTCGATTATCGGTTAGCTAGCTAGCTAGTGGCTAAGTGGCACCTA 29 1700011 0.851577693 9 23 183 0.818181818 1.079181246 0.272727273 0.379310345 0.590909091 29 6 2 36 2L:1699974-1700066 7 15 142 FBgn0086758 5795.003333 67.42333333 103.87 0.002588437 0.22247491 0.144411283 -4 -4 -4 0.25 dme-miR-252-5p 7mer-m8 GTACTTA 2L 1701697 1701703 + 2L_1701697_1701703_+ 0.551221823 0.551125405 0.551173614 6.82E-05 chinmo FBtr0307047 1696148 1704682 2L + 1701675 1701712 3'utr chinmo FlyBase G1068.1 AAAGCCCCTCAACAAGCCAATTGTACTTACGATTACTT 32 1701696 0.771457759 2 32 191 1 1.602059991 0 0.21875 0.375 32 0 0 40 2L:1701675-1701712 7 chinmo FBtr0307047 1696148 1704682 GTACTTA 7mer-m8 dme-miR-252-5p 2L + 1701673 1701709 3'utr chinmo FlyBase G844.1 CGAAAGCCCCTCAACAAGCCAATTGTACTTACGATTA 19 1701696 0.783020989 2 18 111 1 1.477121255 0.033333333 0.526315789 0.7 19 0 0 30 2L:1701673-1701709 7 25.5 143 FBgn0086758 5795.003333 67.42333333 103.87 0.004400343 0.378207347 0.245499182 1 1 1 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 2L 1706843 1706849 + 2L_1706843_1706849_+ 0.521088167 0.521041629 0.521064898 3.30E-05 cpb FBtr0331630 1706226 1706962 2L + 1706817 1706869 3'utr cpb FlyBase G1082.1 AAGCAAAATATTAACTGAAATCGCTTTGTGATTGTATTATCTGAGGAAATGCA 20 1706848 0.931265133 7 20 168 1 1.414973348 0.038461538 0.2 0.384615385 20 0 0 26 2L:1706817-1706869 7 cpb FBtr0331630 1706226 1706962 TGTGATT 7mer-m1 dme-miR-308-3p 2L + 1706815 1706867 3'utr cpb FlyBase G857.1 CGAAGCAAAATATTAACTGAAATCGCTTTGTGATTGTATTATCTGAGGAAATG 22 1706848 0.970157702 7 22 179 1 1.544068044 0.057142857 0.454545455 0.657142857 22 0 0 35 2L:1706815-1706867 7 19.5 144 FBgn0011570 1677.946667 128.21 196.5033333 0.011621347 0.15209422 0.099234958 -5 -5 -5 0.25 dme-miR-7-5p 7mer-A1 TCTTCCA 2L 1707615 1707621 - 2L_1707615_1707621_- 0.796985496 0.817008775 0.806997135 0.014158611 CG17660 FBtr0077912 1707130 1707771 2L - 1707542 1707679 3'utr CG17660 FlyBase G6828.2 TAGTTCTATCCGCCATTGAGGAGGAAAACCCCTTATTGCTGCGCTGCGCTGACACTGATCTTCCAATTTCGAGAACCGTCTGTCCGGCCACGCCTTCTGAGCCCGTGTAAAATAATGTATGTAATCGTAGTTCCTTCT 180 1707631 0.801228029 29 162 1080 0.887892377 1.092545208 0.197309417 0.194444444 0.349775785 180 10 15 198 2L:1707542-1707679 7 CG17660 FBtr0077912 1707130 1707771 TCTTCCA 7mer-A1 dme-miR-7-5p 2L - 1707549 1707679 3'utr CG17660 FlyBase G5340.1 TAGTTCTATCCGCCATTGAGGAGGAAAACCCCTTATTGCTGCGCTGCGCTGACACTGATCTTCCAATTTCGAGAACCGTCTGTCCGGCCACGCCTTCTGAGCCCGTGTAAAATAATGTATGTAATCGTAGT 171 1707630 0.780137689 25 148 1006 0.88973384 1.290034611 0.16730038 0.409356725 0.615969582 171 18 11 234 2L:1707549-1707679 7 57 145 FBgn0031356 556.82 28.87 44.32666667 0.102367013 1.974367856 1.285907655 10 9 9.5 0.25 dme-miR-184-3p 6mer2-7 CCGTCC 2L 1711399 1711404 - 2L_1711399_1711404_- 0.964246861 0.914547424 0.939397142 0.035142853 frtz FBtr0333545|FBtr0077911 1711300|1711300 1711751|1711751 2L - 1711337 1711412 3'utr frtz FlyBase G6837.1 AACTATTGCCGTCCCAGTTAGTGCAAAGCTTTAAATAGGAAAGTTTTACTCATAGGTTCTCTATACTCTTTACACA 57 1711406 0.982518515 9 46 376 0.830985915 1.770852012 0.028169014 0.210526316 0.366197183 57 12 0 59 2L:1711337-1711412 6 frtz FBtr0333545|FBtr0077911 1711300|1711300 1711751|1711751 CCGTCC 6mer2-7 dme-miR-184-3p 2L - 1711378 1711412 3'utr frtz FlyBase G5348.2 AACTATTGCCGTCCCAGTTAGTGCAAAGCTTTAAA 38 1711406 0.683313038 6 31 206 0.833333333 0.954242509 0 0.342105263 0.537037037 38 5 4 45 2L:1711378-1711412 6 38.5 146 FBgn0086698 6514.663333 221.8366667 342.0966667 0.005909745 0.173551111 0.112541289 2 2 2 0.25 dme-miR-7-5p 8mer-A1 GTCTTCCA 2L 1711693 1711700 - 2L_1711693_1711700_- 0.674344031 0.66404298 0.669193505 0.007283907 frtz FBtr0333545|FBtr0077911|FBtr0333544 1711300|1711300|1711598 1711751|1711751|1711751 2L - 1711678 1711714 3'utr frtz FlyBase G6838.1 CGGTTAAGCGCTGCGTCTTCCAATCGTTTGTAACTAT 19 1711697 0.630435661 6 16 133 0.80952381 0.929418926 0.380952381 0.105263158 0.19047619 19 3 1 17 2L:1711678-1711714 8 frtz FBtr0333545|FBtr0077911|FBtr0333544 1711300|1711300|1711598 1711751|1711751|1711751 GTCTTCCA 8mer-A1 dme-miR-7-5p 2L - 1711650 1711713 3'utr frtz FlyBase G5349.1 GGTTAAGCGCTGCGTCTTCCAATCGTTTGTAACTATTGTAGTAGGCTGCTCCTTCTACCCTCTT 18 1711697 0.971354525 5 18 111 1 1.322219295 0.238095238 0.111111111 0.238095238 18 0 0 21 2L:1711650-1711713 8 18 147 FBgn0086698 6514.663333 221.8366667 342.0966667 0.002762998 0.081140779 0.052616707 -3 -3 -3 0.25 dme-miR-92b-3p 8mer-m1 GTGCAATT 2L 1711735 1711742 - 2L_1711735_1711742_- 0.596698049 0.596697962 0.596698005 0 frtz FBtr0333545|FBtr0077911|FBtr0333544 1711300|1711300|1711598 1711751|1711751|1711751 2L - 1711717 1711763 stop_codon frtz FlyBase G6839.1 GGCGTGGTCTAATAATTCATAGTGCAATTCCCAGGCGTACACCACAC 25 1711744 0.684334359 4 21 148 0.892857143 1.397940009 0.285714286 0.12 0.214285714 25 3 0 25 2L:1711717-1711763 8 frtz FBtr0333545|FBtr0077911|FBtr0333544 1711300|1711300|1711598 1711751|1711751|1711751 GTGCAATT 8mer-m1 dme-miR-92b-3p 2L - 1711720 1711778 stop_codon frtz FlyBase G5350.1 AAGGTGGTCCACTTCGGCGTGGTCTAATAATTCATAGTGCAATTCCCAGGCGTACACCA 7 1711744 0.802747528 5 7 38 1 1.079181246 0 0.571428571 0.75 7 0 0 12 2L:1711720-1711778 8 14 148 FBgn0086698 6514.663333 221.8366667 342.0966667 0.002148998 0.063109495 0.040924105 2 2 2 0.25 dme-miR-999-3p 6mer3-8 AGTTAA 2L 1716730 1716735 - 2L_1716730_1716735_- 0.84170255 0.976785358 0.909243954 0.095518035 Rim2 FBtr0305618|FBtr0306167 1716242|1716242 1717102|1717102 2L - 1716444 1716877 3'utr Rim2 FlyBase G6845.2 AAGAAAAAACCAATAATGGGAAACACGCACCAGGATCGAAGTGCACCATCCACACCCTAAACCCACTTGCTGCATGCCACAGAAGGATGTGGTATGCCACCGCAGGGCGAAACGTTATCAAAATTTGAAAAGGCTGCTATTTAGTTAAAGTTACAATATATATTGAGTGTATAAATGTGGTTGATACTTGGATAATATAGTGTACATAGGACTCGATTCGCTCAGAGTGCATTGTAAATAGTTAAAGAGTGAGTTCGCTGGCGTAGTTTTCTTAGTTGTAAGCACAAAATGTTGAATCGGCCGCAGTTGCCAGTAGATGCCGCTAAATATATATATATATAGATATAAAGCCGACCGATCCGATTCGTAAACTGTAAAAGTTTCCGTTAAGTTTCCTCAAATGCGATATACGATTTAGTTATCATTACTCTACT 656 1716739 0.997252881 77 585 5290 0.888020833 1.833784375 0.203125 0.149390244 0.2734375 656 77 9 682 2L:1716444-1716877 6 Rim2 FBtr0305618|FBtr0306167 1716242|1716242 1717102|1717102 AGTTAA 6mer3-8 dme-miR-999-3p 2L - 1716503 1716860 3'utr Rim2 FlyBase G5355.2 GGGAAACACGCACCAGGATCGAAGTGCACCATCCACACCCTAAACCCACTTGCTGCATGCCACAGAAGGATGTGGTATGCCACCGCAGGGCGAAACGTTATCAAAATTTGAAAAGGCTGCTATTTAGTTAAAGTTACAATATATATTGAGTGTATAAATGTGGTTGATACTTGGATAATATAGTGTACATAGGACTCGATTCGCTCAGAGTGCATTGTAAATAGTTAAAGAGTGAGTTCGCTGGCGTAGTTTTCTTAGTTGTAAGCACAAAATGTTGAATCGGCCGCAGTTGCCAGTAGATGCCGCTAAATATATATATATATAGATATAAAGCCGACCGATCCGATTCGTAAACTGT 284 1716739 0.989492683 50 255 2137 0.904761905 1.734685557 0.169047619 0.348591549 0.55952381 284 34 6 380 2L:1716503-1716860 6 121.5 149 FBgn0031359 376.9533333 20.33333333 30.89333333 0.322321065 5.975409836 3.932887354 4 4 4 0.25 dme-miR-190-5p 6mer3-8 ACATAT 2L 17367730 17367735 - 2L_17367730_17367735_- 0.875068852 0.843335233 0.859202042 0.022439114 Lrch FBtr0080968|FBtr0080969 17367509|17367509 17368196|17368196 2L - 17367698 17367814 3'utr Lrch FlyBase G11109.1 CACCCATACGAGCGAAATATCGGGCCAAAATTACGACTAGCGATTAGTTGCATATTGAATACTGTTTTAAGTATGAATCACATATGAACATCCAAATATTTAGATATTTATCGAATT 15 17367731 0.970578688 11 14 85 0.9375 0.875061263 0.125 0.066666667 0.125 15 0 1 15 2L:17367698-17367814 6 Lrch FBtr0080968|FBtr0080969 17367509|17367509 17368196|17368196 ACATAT 6mer3-8 dme-miR-190-5p 2L - 17367707 17367746 3'utr Lrch FlyBase G8545.1 AAGTATGAATCACATATGAACATCCAAATATTTAGATATT 7 17367730 0.741111066 3 6 37 1 0.954242509 0.222222222 0.142857143 0.333333333 7 0 0 9 2L:17367707-17367746 6 6.5 150 FBgn0032633 3134.436667 93.34666667 144.12 0.002073738 0.06963291 0.045101304 -4 -5 -4.5 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 17369156 17369163 - 2L_17369156_17369163_- 0.497494711 0.499692835 0.498593773 0.001554291 Lrch FBtr0339797 17368740 17370818 2L - 17369149 17369183 3'utr Lrch FlyBase G11114.1 ATTAATTTAGGCATACTATTGTACTTAAACGATGA 14 17369164 0.732390734 2 14 116 1 1.146128036 0 0 0 14 0 0 14 2L:17369149-17369183 8 Lrch FBtr0339797 17368740 17370818 GTACTTAA 8mer-A1 dme-miR-252-5p 2L - 17369146 17369181 3'utr Lrch FlyBase G8550.1 TAATTTAGGCATACTATTGTACTTAAACGATGAAAA 11 17369164 0.674633709 4 10 92 0.944444444 1.230448921 0.333333333 0.454545455 0.666666667 11 1 0 17 2L:17369146-17369181 8 12.5 151 FBgn0032633 3134.436667 93.34666667 144.12 0.003987957 0.133909442 0.086733278 1 1 1 0.25 dme-miR-1012-3p 7mer-A1 TGACTAA 2L 17370316 17370322 - 2L_17370316_17370322_- 0.647236043 0.49934417 0.573290106 0.104575295 Lrch FBtr0339797 17368740 17370818 2L - 17370262 17370339 3'utr Lrch FlyBase G11119.1 TATGACTATGATGACTATGACTAATAATGACTGTTTTAATTTAATAGATTTTATAATAATCTCCGGACTAAACATTAA 27 17370306 0.865440668 10 27 230 1 1.602059991 0.1 0.333333333 0.55 27 0 0 40 2L:17370262-17370339 7 Lrch FBtr0339797 17368740 17370818 TGACTAA 7mer-A1 dme-miR-1012-3p 2L - 17370290 17370338 3'utr Lrch FlyBase G8557.1 ATGACTATGATGACTATGACTAATAATGACTGTTTTAATTTAATAGATT 20 17370314 0.713741484 7 18 179 0.933333333 1.447158031 0.1 0.35 0.566666667 20 2 0 28 2L:17370290-17370338 7 21 152 FBgn0032633 3134.436667 93.34666667 144.12 0.006699768 0.224967862 0.145711907 -16 -8 -12 0.25 dme-miR-277-3p 7mer-A1 GCATTTA 2L 17370582 17370588 - 2L_17370582_17370588_- 0.532793509 0.536075999 0.534434754 0.002321078 Lrch FBtr0339797 17368740 17370818 2L - 17370561 17370621 3'utr Lrch FlyBase G11122.1 AAATTCCCCAAAAGACAAGCAGAACACATTGAGGCATTTAATGAGAGGAAACGCAAAGACT 108 17370592 0.760599074 6 99 433 0.949152542 2.049218023 0.025423729 0.074074074 0.152542373 108 6 0 112 2L:17370561-17370621 7 Lrch FBtr0339797 17368740 17370818 GCATTTA 7mer-A1 dme-miR-277-3p 2L - 17370523 17370619 3'utr Lrch FlyBase G8559.1 ATTCCCCAAAAGACAAGCAGAACACATTGAGGCATTTAATGAGAGGAAACGCAAAGACTTCAAATCAATATTTGGCTCCTATTTCTGTATGATTATT 90 17370592 0.951887446 7 86 387 0.969230769 1.62324929 0.084615385 0.377777778 0.569230769 90 2 2 126 2L:17370523-17370619 7 92.5 153 FBgn0032633 3134.436667 93.34666667 144.12 0.029510885 0.990929867 0.641826256 4 4 4 0.25 dme-miR-932-5p 7mer-A1 GAATTGA 2L 17413287 17413293 - 2L_17413287_17413293_- 0.787422699 0.823347664 0.805385182 0.025402811 Dif FBtr0081009|FBtr0081008|FBtr0301578 17413246|17413246|17413246 17413514|17413514|17413514 2L - 17413266 17413379 3'utr Dif FlyBase G11138.1 TTACCGCAATGTACATAAATTTAATGAGGGAAATGCGAATCTCATTGCCCGATGCCTTGTTACGACTTTTCGTTATTGACAAAAGTGAATTGAAAATGATTATTGTTTAAATAA 26 17413290 0.979002354 14 25 172 0.966666667 1.462397998 0.4 0.153846154 0.266666667 26 1 0 29 2L:17413266-17413379 7 Dif FBtr0081008|FBtr0301578|FBtr0081009 17413246|17413246|17413246 17413514|17413514|17413514 GAATTGA 7mer-A1 dme-miR-932-5p 2L - 17413275 17413382 3'utr Dif FlyBase G8572.1 ATTTTACCGCAATGTACATAAATTTAATGAGGGAAATGCGAATCTCATTGCCCGATGCCTTGTTACGACTTTTCGTTATTGACAAAAGTGAATTGAAAATGATTATTG 23 17413319 0.976773326 13 21 142 0.96875 1.190331698 0.21875 0.304347826 0.5 23 0 1 31 2L:17413275-17413382 7 5.5 154 FBgn0011274 1172.133333 42.98333333 65.76666667 0.004692299 0.127956572 0.083628991 -3 26 11.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2L 17415522 17415528 - 2L_17415522_17415528_- 0.65625987 0.655330944 0.655795407 0.000656902 Dif FBtr0301577 17414905 17415684 2L - 17415441 17415566 5'utr Dif FlyBase G11145.1 ACAGCAAAACACACAACTGCACCAACAAATTAAACTTTTCTAGTCGTCTTTTTGTTTCAGTATTAATTATAATGATTACACAAATTTCTAGCTAAGAACCCCTGAGATCGATCGCTCACCAAATTC 218 17415529 0.992561497 18 210 2415 0.955172414 2.141449773 0.044827586 0.252293578 0.437931034 218 12 1 277 2L:17415441-17415566 7 Dif FBtr0301577 17414905 17415684 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2L - 17415486 17415544 5'utr Dif FlyBase G8580.1 CAACAAATTAAACTTTTCTAGTCGTCTTTTTGTTTCAGTATTAATTATAATGATTACAC 167 17415529 0.730211041 15 160 1896 0.954166667 2.359835482 0.016666667 0.317365269 0.525 167 11 0 229 2L:17415486-17415544 7 178.5 155 FBgn0011274 1172.133333 42.98333333 65.76666667 0.152286429 4.152772392 2.714140902 1 1 1 0.25 dme-miR-304-5p 6mer2-7 GAGATT 2L 17438779 17438784 - 2L_17438779_17438784_- 0.701761858 0.66081229 0.681287074 0.02895574 dl FBtr0081007|FBtr0340250 17438644|17438644 17439788|17439788 2L - 17438734 17438816 3'utr dl FlyBase G11164.1 ATGATTAGTCGAAATTATAGTCAAGAAAATGAGAGATTGATTCGAAATCAATATGAAATTTTTGTCGCTTTTCTACTCGTTTA 18 17438780 0.969136251 9 18 106 1 1.322219295 0.142857143 0.111111111 0.238095238 18 0 0 21 2L:17438734-17438816 6 dl FBtr0340250|FBtr0081007 17438644|17438644 17439788|17439788 GAGATT 6mer2-7 dme-miR-304-5p 2L - 17438768 17438815 3'utr dl FlyBase G8592.1 TGATTAGTCGAAATTATAGTCAAGAAAATGAGAGATTGATTCGAAATC 16 17438780 0.78324676 6 16 77 1 1.447158031 0.178571429 0.4375 0.678571429 16 0 0 28 2L:17438768-17438815 6 10 156 FBgn0260632 1797.99 61.25333333 93.53666667 0.005561766 0.163256421 0.106909946 -4 -4 -4 0.25 dme-miR-33-5p 8mer-m1 CAATGCAC 2L 17438894 17438901 - 2L_17438894_17438901_- 0.654965707 0.507813578 0.581389642 0.104052248 dl FBtr0081007|FBtr0340250 17438644|17438644 17439788|17439788 2L - 17438877 17439067 3'utr dl FlyBase G11165.1 TGTTTTGAGATGGATGCTAGACATCTAACTGAATCCTACCTAGTCAAATAGCATCATATATATTTGATGTTTTCTTCGGTATACCAAAGACTACTTAACAAATCATCGCCCCCGATGACGTATTACTCGAATAGACTCTTTTAGAAACTATTAGAAAGCACTCAATCAATGCACAAATCCACTCACCCAGA 281 17438902 0.916373081 31 263 1689 0.949704142 1.904445041 0.159763314 0.170818505 0.310650888 281 14 3 321 2L:17438877-17439067 8 dl FBtr0340250|FBtr0081007 17438644|17438644 17439788|17439788 CAATGCAC 8mer-m1 dme-miR-33-5p 2L - 17438865 17439006 3'utr dl FlyBase G8593.1 ATTTGATGTTTTCTTCGGTATACCAAAGACTACTTAACAAATCATCGCCCCCGATGACGTATTACTCGAATAGACTCTTTTAGAAACTATTAGAAAGCACTCAATCAATGCACAAATCCACTCACCCAGAACACCATGAAAT 157 17438928 0.976044885 19 147 938 0.951020408 2.367355921 0.093877551 0.324840764 0.567346939 157 12 0 233 2L:17438865-17439006 8 51 157 FBgn0260632 1797.99 61.25333333 93.53666667 0.028365008 0.832607749 0.545240726 1 27 14 0.25 dme-miR-283-5p 7mer-m8 TGATATT 2L 17461215 17461221 - 2L_17461215_17461221_- 0.540974106 0.620036667 0.580505387 0.055905701 BicD FBtr0081002|FBtr0330225|FBtr0330226 17460815|17459603|17460815 17461725|17461725|17461665 2L - 17461198 17461240 3'utr BicD FlyBase G11189.1 GATGTTGAACAGATGGTATTGATATTGGCAACTGAAACATGCA 9 17461215 0.836989282 4 9 57 1 1.041392685 0.272727273 0.222222222 0.363636364 9 0 0 11 2L:17461198-17461240 7 BicD FBtr0081002|FBtr0330225|FBtr0330226 17460815|17459603|17460815 17461725|17461725|17461665 TGATATT 7mer-m8 dme-miR-283-5p 2L - 17461203 17461248 3'utr BicD FlyBase G8608.1 CACAAATTGATGTTGAACAGATGGTATTGATATTGGCAACTGAAAC 7 17461226 0.782233352 5 7 49 1 1.176091259 0 0.714285714 0.866666667 7 0 0 15 2L:17461203-17461248 7 6.5 158 FBgn0000183 544.58 15.32 23.58666667 0.011935804 0.424281984 0.275579423 -6 5 -0.5 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 2L 17461499 17461504 - 2L_17461499_17461504_- 0.706849141 0.745697909 0.726273525 0.02747025 BicD FBtr0081002|FBtr0330225|FBtr0305688|FBtr0330226 17460815|17459603|17461396|17460815 17461725|17461725|17462145|17461665 2L - 17461430 17461674 stop_codon BicD FlyBase G11191.1 AAGTTGTAAAGTCGTTGGAGTTCCTGCGGAAATGAGAGATTCCCAAAACCACATGATATACTGCGAACGTATTTGAGAACGAAGCTATATCCCAGCTGTATCCAACTACTATAACTATGTTTGTTTGTATTGTACTTGTATTTATTGAAAGTTTAGTTAGATGAAAGTTTTGTGTTAGGCAAGGGAGCAACAAACGGTTATTAACGGTTAGTTACTTAAACGTCCATTTAATTTAATTAAAAACA 159 17461505 0.943649442 31 154 1175 0.972677596 1.949390007 0.169398907 0.144654088 0.256830601 159 4 1 178 2L:17461430-17461674 6 BicD FBtr0081002|FBtr0330225|FBtr0305688|FBtr0330226 17460815|17459603|17461396|17460815 17461725|17461725|17462145|17461665 TGTGTT 6mer3-8 dme-miR-317-3p 2L - 17461431 17461525 3'utr BicD FlyBase G8609.1 AGTTTAGTTAGATGAAAGTTTTGTGTTAGGCAAGGGAGCAACAAACGGTTATTAACGGTTAGTTACTTAAACGTCCATTTAATTTAATTAAAAAC 72 17461505 0.756518576 14 68 614 0.944954128 2.012837225 0.247706422 0.416666667 0.614678899 72 6 0 103 2L:17461431-17461525 6 44.5 159 FBgn0000183 544.58 15.32 23.58666667 0.081714349 2.904699739 1.886659129 1 1 1 0.25 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 2L 17475521 17475526 - 2L_17475521_17475526_- 0.999990019 0.996922325 0.998456172 0.002169191 Aac11 FBtr0081001 17474910 17475587 2L - 17475510 17475548 3'utr Aac11 FlyBase G11207.1 ACTTCACTTGAATGGTTTGTCCCTAGTCCGTAGACATAC 7 17475518 0.975400187 5 7 52 1 0.954242509 0.444444444 0.142857143 0.333333333 7 0 0 9 2L:17475510-17475548 6 Aac11 FBtr0081001 17474910 17475587 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 2L - 17475511 17475540 3'utr Aac11 FlyBase G8624.1 TGAATGGTTTGTCCCTAGTCCGTAGACATA 11 17475532 0.55876014 6 10 80 0.956521739 1.342422681 0.173913043 0.636363636 0.826086957 11 1 0 22 2L:17475511-17475540 6 9 160 FBgn0027885 2398.67 116.9633333 177.4933333 0.003752079 0.076947191 0.05070613 -8 6 -1 0.25 dme-bantam-3p 8mer-A1 TGATCTCA 2L 17481931 17481938 + 2L_17481931_17481938_+ 0.618824847 0.623282676 0.621053761 0.003152211 CG5110 FBtr0306162 17481785 17482037 2L + 17481886 17481965 3'utr CG5110 FlyBase G5034.1 CACCATTGTACTATTCCGGGAATTTATTTCATATCCTGCGAAGGGTGATCTCAAAGATGAACAAAGTTCCGAGTCCTCCG 38 17481931 0.978760997 7 34 229 0.931818182 1.311753861 0.454545455 0.157894737 0.272727273 38 2 1 41 2L:17481886-17481965 8 CG5110 FBtr0306162 17481785 17482037 TGATCTCA 8mer-A1 dme-bantam-3p 2L + 17481890 17481944 3'utr CG5110 FlyBase G3918.1 ATTGTACTATTCCGGGAATTTATTTCATATCCTGCGAAGGGTGATCTCAAAGATG 19 17481931 0.971694183 6 18 109 0.962962963 1.414973348 0.518518519 0.368421053 0.555555556 19 1 0 26 2L:17481890-17481944 8 25.5 161 FBgn0032642 238.3333333 55.84666667 85.14666667 0.106993007 0.456607377 0.299483245 0 0 0 0.25 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 2L 17973602 17973608 + 2L_17973602_17973608_+ 0.595127904 0.617476928 0.606302416 0.015803129 CG5674 FBtr0290267|FBtr0081021|FBtr0340182|FBtr0081022 17973392|17973392|17973392|17972122 17974868|17974868|17974868|17974868 2L + 17973591 17973619 3'utr CG5674 FlyBase G5044.1 AGAGAGCTATGTGGTGCTGAAAATGCAAT 6 17973602 0.682697517 2 6 28 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2L:17973591-17973619 7 CG5674 FBtr0340182|FBtr0081022|FBtr0290267|FBtr0081021 17973392|17972122|17973392|17973392 17974868|17974868|17974868|17974868 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 2L + 17973587 17973616 3'utr CG5674 FlyBase G3923.1 AAGCAGAGAGCTATGTGGTGCTGAAAATGC 5 17973602 0.938693162 3 4 24 1 0.84509804 0.285714286 0.2 0.428571429 5 0 0 7 2L:17973587-17973616 7 5.5 162 FBgn0032656 133.77 5.08 7.833333333 0.041115347 1.082677165 0.70212766 0 0 0 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 17974325 17974331 + 2L_17974325_17974331_+ 0.486476993 0.482476051 0.484476522 0.002829064 CG5674 FBtr0290267|FBtr0290267|FBtr0290267|FBtr0081021|FBtr0081021|FBtr0081021|FBtr0340182|FBtr0340182|FBtr0340182|FBtr0081022|FBtr0081022|FBtr0081022 17973392|17973392|17973392|17973392|17973392|17973392|17973392|17973392|17973392|17972122|17972122|17972122 17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868 2L + 17974295 17974344 3'utr CG5674 FlyBase G5045.1 TTATTTTGTATCTTTGGACTAAAAACACATTGTGATAAAATGCACCATGA 101 17974324 0.830697806 5 93 569 0.93495935 1.28254659 0.154471545 0.188118812 0.333333333 101 3 5 115 2L:17974295-17974344 7 CG5674 FBtr0340182|FBtr0340182|FBtr0340182|FBtr0081022|FBtr0081022|FBtr0081022|FBtr0290267|FBtr0290267|FBtr0290267|FBtr0081021|FBtr0081021|FBtr0081021 17973392|17973392|17973392|17972122|17972122|17972122|17973392|17973392|17973392|17973392|17973392|17973392 17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868|17974868 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 17974288 17974353 3'utr CG5674 FlyBase G3924.1 AAATAGTTTATTTTGTATCTTTGGACTAAAAACACATTGTGATAAAATGCACCATGAGCTTTAGAG 75 17974324 0.810359648 6 72 415 0.971962617 1.414973348 0.186915888 0.32 0.523364486 75 0 3 104 2L:17974288-17974353 7 71.5 163 FBgn0032656 133.77 5.08 7.833333333 0.534499514 14.07480315 9.127659574 1 1 1 0.25 dme-miR-304-5p 7mer-m8 TGAGATT 2L 18129026 18129032 + 2L_18129026_18129032_+ 0.616132663 0.620141912 0.618137287 0.002834933 CG5758 FBtr0081037|FBtr0340577|FBtr0340575|FBtr0081036|FBtr0081035|FBtr0340576 18128943|18128943|18128943|18128943|18128943|18128943 18129862|18129862|18129862|18129862|18129862|18129862 2L + 18128986 18129128 3'utr CG5758 FlyBase G5059.1 TATCGCGATGGTAAATGCGAAAATAACACAGGCGGCACTTTGAGATTGTTTTTGGGATCCCTCAATCGGCCTTCGAGTCTTGTATCAGTCTATTTCCGAAGTAGGAGACATTCCAGGCCCTTCGACAATTAGTCTATTGTCGC 39 18129025 0.978304154 14 39 258 1 1.681241237 0.0625 0.179487179 0.333333333 39 0 0 48 2L:18128986-18129128 7 CG5758 FBtr0081035|FBtr0340576|FBtr0340575|FBtr0081036|FBtr0081037|FBtr0340577 18128943|18128943|18128943|18128943|18128943|18128943 18129862|18129862|18129862|18129862|18129862|18129862 TGAGATT 7mer-m8 dme-miR-304-5p 2L + 18129013 18129071 3'utr CG5758 FlyBase G3934.1 ACAGGCGGCACTTTGAGATTGTTTTTGGGATCCCTCAATCGGCCTTCGAGTCTTGTATC 9 18129025 0.954842385 7 9 67 1 1.146128036 0 0.444444444 0.642857143 9 0 0 14 2L:18129013-18129071 7 11 164 FBgn0032666 5 0.196666667 0.306666667 2.2 55.93220339 35.86956522 1 1 1 0.25 dme-miR-92b-3p 7mer-m1 TGCAATT 2L 18129175 18129181 + 2L_18129175_18129181_+ 0.554502792 0.489573728 0.52203826 0.045911807 CG5758 FBtr0081037|FBtr0340577|FBtr0340575|FBtr0081036|FBtr0081035|FBtr0340576 18128943|18128943|18128943|18128943|18128943|18128943 18129862|18129862|18129862|18129862|18129862|18129862 2L + 18129136 18129353 3'utr CG5758 FlyBase G5060.1 TATTTTGGCAATTAATTAGCAGTATGTACAATATTTTTTTGCAATTGATCTGCGTTAGAGGAACGAATGTGAGAGGGAGGCGAGCGCTAAAAGCGTTTTTGTATAGTTCTGGGCTAATTTTGTAACGAATTTTTCTAGTTTAGTTCTTAGTTTTTCATGTATGTTTTAAGTTTAGCATTGAACGAGGCGGTGAAACGAAGTATACTACAAAGTCAACA 213 18129182 0.98306767 26 209 1617 0.984063745 2.392696953 0.470119522 0.145539906 0.274900398 213 4 0 247 2L:18129136-18129353 7 CG5758 FBtr0081035|FBtr0340576|FBtr0340575|FBtr0081036|FBtr0081037|FBtr0340577 18128943|18128943|18128943|18128943|18128943|18128943 18129862|18129862|18129862|18129862|18129862|18129862 TGCAATT 7mer-m1 dme-miR-92b-3p 2L + 18129134 18129221 3'utr CG5758 FlyBase G3936.1 ATTATTTTGGCAATTAATTAGCAGTATGTACAATATTTTTTTGCAATTGATCTGCGTTAGAGGAACGAATGTGAGAGGGAGGCGAGCG 109 18129182 0.983885704 10 100 743 0.921212121 1.704722333 0.503030303 0.311926606 0.545454545 109 11 2 152 2L:18129134-18129221 7 136 165 FBgn0032666 5 0.196666667 0.306666667 27.2 691.5254237 443.4782609 -7 -7 -7 0.25 dme-bantam-3p 7mer-A1 GATCTCA 2L 18130470 18130476 - 2L_18130470_18130476_- 0.815417154 0.816279201 0.815848178 0.000609526 kel FBtr0081043|FBtr0081042 18129882|18129882 18130773|18133613 2L - 18130442 18130507 3'utr kel FlyBase G11247.1 TTTCTAATTACAACGCTGCTCTACAAAATTGGATCTCAAAACAATACAAGCATAACGAATCGACCA 383 18130478 0.984834489 5 375 3033 0.976905312 2.325310372 0.018475751 0.104438642 0.207852194 383 9 1 423 2L:18130442-18130507 7 kel FBtr0081043|FBtr0081042 18129882|18129882 18130773|18133613 GATCTCA 7mer-A1 dme-bantam-3p 2L - 18130442 18130506 3'utr kel FlyBase G8652.1 TTCTAATTACAACGCTGCTCTACAAAATTGGATCTCAAAACAATACAAGCATAACGAATCGACCA 192 18130478 0.951201856 8 184 1509 0.957692308 2.396199347 0.034615385 0.270833333 0.461538462 192 11 0 249 2L:18130442-18130506 7 280 166 FBgn0001301 597.3333333 13.11666667 20.1 0.46875 21.34688691 13.93034826 2 2 2 0.25 dme-miR-252-5p 6mer3-8 GTACTT 2L 18532142 18532147 - 2L_18532142_18532147_- 0.672178179 0.759332827 0.715755503 0.061627609 Pde11 FBtr0303163|FBtr0343830 18532023|18532023 18534130|18533334 2L - 18532120 18532171 3'utr Pde11 FlyBase G11321.1 TGTAATCCTTCTTTAGACTAGATTGTACTTTGTGAGTTTTGTTATTTATTGT 8 18532159 0.795966705 4 8 101 1 1 0 0.25 0.4 8 0 0 10 2L:18532120-18532171 6 Pde11 FBtr0343830|FBtr0303163 18532023|18532023 18533334|18534130 GTACTT 6mer3-8 dme-miR-252-5p 2L - 18532125 18532168 3'utr Pde11 FlyBase G8708.1 AATCCTTCTTTAGACTAGATTGTACTTTGTGAGTTTTGTTATTT 11 18532159 0.762208606 5 9 116 0.857142857 0.77815125 0.142857143 0.272727273 0.428571429 11 1 1 12 2L:18532125-18532168 6 8.5 167 FBgn0085370 2569.533333 47.93666667 73.66666667 0.003307994 0.177317294 0.115384615 12 12 12 0.25 dme-bantam-3p 6mer3-8 TGATCT 2L 18532881 18532886 - 2L_18532881_18532886_- 0.989765013 0.993785052 0.991775032 0.00284264 Pde11 FBtr0303162|FBtr0303163|FBtr0343830|FBtr0112544|FBtr0343831|FBtr0112545 18532726|18532023|18532023|18532726|18532726|18532726 18534130|18534130|18533334|18533334|18533334|18533334 2L - 18532857 18532899 3'utr Pde11 FlyBase G11326.1 TATGTGTATATTCTGATCTGTGTGTGTTTGTAACTTAAATTTT 14 18532886 0.735108972 5 10 164 0.6875 0.740362689 0.5 0.142857143 0.25 14 4 1 11 2L:18532857-18532899 6 Pde11 FBtr0112545|FBtr0343831|FBtr0112544|FBtr0343830|FBtr0303163|FBtr0303162 18532726|18532726|18532726|18532023|18532023|18532726 18533334|18533334|18533334|18533334|18534130|18534130 TGATCT 6mer3-8 dme-bantam-3p 2L - 18532869 18532900 3'utr Pde11 FlyBase G8711.1 GTATGTGTATATTCTGATCTGTGTGTGTTTGT 12 18532886 0.761587683 4 8 122 0.928571429 1.113943352 0.642857143 0.083333333 0.214285714 12 1 0 13 2L:18532869-18532900 6 11 168 FBgn0085370 2569.533333 47.93666667 73.66666667 0.004280933 0.229469439 0.149321267 0 0 0 0.25 dme-miR-14-3p 6mer3-8 AAGACT 2L 18599774 18599779 - 2L_18599774_18599779_- 0.773879348 0.996759988 0.885319668 0.157600454 CG10413 FBtr0081080|FBtr0343829 18599753|18599753 18600609|18600609 2L - 18599754 18599910 3'utr CG10413 FlyBase G11351.1 GGACGGACATTGATCGATTGTCGTAGACAAGTGTTTTGTGTGTGTAAACTTTATGGAACTGTGACCTAGCTAATAATATAATAATTGATCACAGCATTCATTGTAATCGGTTCTTTCCAATATTTTAAATAAAGACTTAGCGATATGTATTTATGTA 32 18599774 0.966256522 15 31 251 0.974358974 1.579783597 0.051282051 0.15625 0.307692308 32 1 0 38 2L:18599754-18599910 6 CG10413 FBtr0343829|FBtr0081080 18599753|18599753 18600609|18600609 AAGACT 6mer3-8 dme-miR-14-3p 2L - 18599759 18599824 3'utr CG10413 FlyBase G8729.1 GATCACAGCATTCATTGTAATCGGTTCTTTCCAATATTTTAAATAAAGACTTAGCGATATGTATTT 15 18599774 0.831795305 6 14 128 1 1.322219295 0.095238095 0.266666667 0.476190476 15 0 0 21 2L:18599759-18599824 6 13 169 FBgn0032689 528.2066667 16.84 25.75 0.024611579 0.771971496 0.504854369 -5 -5 -5 0.25 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 18599962 18599967 - 2L_18599962_18599967_- 0.94694175 0.897635872 0.922288811 0.034864466 CG10413 FBtr0081080|FBtr0343829 18599753|18599753 18600609|18600609 2L - 18599921 18599982 3'utr CG10413 FlyBase G11352.1 TTGTGGTTGTAAAATTGATGATTTCATATTGCACTTAGTTTGTAATCCATTTTTGGAAGACC 13 18599943 0.991598997 8 12 138 0.928571429 1.113943352 0.071428571 0.076923077 0.142857143 13 1 0 13 2L:18599921-18599982 6 CG10413 FBtr0343829|FBtr0081080 18599753|18599753 18600609|18600609 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L - 18599888 18599974 3'utr CG10413 FlyBase G8731.1 GTAAAATTGATGATTTCATATTGCACTTAGTTTGTAATCCATTTTTGGAAGACCTTCACAGCTCGGACGGACATTGATCGATTGTCG 10 18599964 0.994864959 6 8 90 0.866666667 1.113943352 0.266666667 0.3 0.533333333 10 2 0 13 2L:18599888-18599974 6 6 170 FBgn0032689 528.2066667 16.84 25.75 0.01135919 0.356294537 0.233009709 -24 -3 -13.5 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 2L 18600059 18600065 - 2L_18600059_18600065_- 0.520969742 0.511404032 0.516186887 0.006763971 CG10413 FBtr0081080|FBtr0343829 18599753|18599753 18600609|18600609 2L - 18600045 18600080 3'utr CG10413 FlyBase G11353.1 CGATATTAACCTCTTTGTGATTGATTATGAATATCT 24 18600066 0.621603319 4 22 235 0.911764706 0.889301703 0.058823529 0.291666667 0.5 24 0 3 31 2L:18600045-18600080 7 CG10413 FBtr0343829|FBtr0081080 18599753|18599753 18600609|18600609 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 18600045 18600094 3'utr CG10413 FlyBase G8732.1 AACGGAACTCACACCGATATTAACCTCTTTGTGATTGATTATGAATATCT 19 18600066 0.991504092 5 17 187 0.869565217 0.698970004 0 0.210526316 0.347826087 19 0 3 20 2L:18600045-18600094 7 21 171 FBgn0032689 528.2066667 16.84 25.75 0.039757166 1.247030879 0.815533981 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 18661256 18661263 + 2L_18661256_18661263_+ 0.63974406 0.643533429 0.641638745 0.00267944 MESR3 FBtr0343808|FBtr0343808|FBtr0343808|FBtr0329971|FBtr0329971|FBtr0329971|FBtr0329972|FBtr0329972|FBtr0329972|FBtr0081073|FBtr0081073|FBtr0081073 18661050|18661050|18661050|18661104|18661104|18661104|18661050|18661050|18661050|18661050|18661050|18661050 18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776 2L + 18661020 18661494 stop_codon MESR3 FlyBase G5088.1 TCGGACCCCCCAATCCCCAGCAGCATCGTTGAGTAGGGTCGGGCGCGTGGATCTGGAACACGAGCGCCCTATGGTGGCAGAACTGAATCTGCCTCGAAGCCACAACCCAACACAACCACGAAGAAATCCAGGAAAAACCAACCCTTAGTTCGTATGGCTAGTTATAGATCCATTTGTTATAGGCCTAAGTTATGCCAATGTGCGATCCGAGTGCGGAACTCGGCCAACACATTTATCTGTGATACGATTTAGGCGTCTTTACTTTAGAGAGGGATACTGATAACACAATTTGATAAAGAACATTTTTAAACGAAGAACATAGCAAATGAAGCGAGAGTTTTTGCAAGTTATTAAAACATATTAAGCGATTAACGTTTGTCGATAAGCAAGTTTTTTGTAAAACCTTTTCTAATATCACACATATACCCTTATGCATAATTATATTCGTACCATATAGTCCTGATATCTATCGAGT 1283 18661255 0.98555517 81 1160 9566 0.906088083 1.730844367 0.305051813 0.163678878 0.305051813 1283 120 25 1399 2L:18661020-18661494 8 MESR3 FBtr0081073|FBtr0081073|FBtr0081073|FBtr0329972|FBtr0329972|FBtr0329972|FBtr0329971|FBtr0329971|FBtr0329971|FBtr0343808|FBtr0343808|FBtr0343808 18661050|18661050|18661050|18661050|18661050|18661050|18661104|18661104|18661104|18661050|18661050|18661050 18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 18661173 18661408 3'utr MESR3 FlyBase G3962.2 ATGGCTAGTTATAGATCCATTTGTTATAGGCCTAAGTTATGCCAATGTGCGATCCGAGTGCGGAACTCGGCCAACACATTTATCTGTGATACGATTTAGGCGTCTTTACTTTAGAGAGGGATACTGATAACACAATTTGATAAAGAACATTTTTAAACGAAGAACATAGCAAATGAAGCGAGAGTTTTTGCAAGTTATTAAAACATATTAAGCGATTAACGTTTGTCGATAAGCAA 766 18661255 0.96837547 45 670 5377 0.886054422 1.762595214 0.308673469 0.392950392 0.604591837 766 117 17 1042 2L:18661173-18661408 8 589.5 172 FBgn0032694 1795.86 104.38 160.0933333 0.328254986 5.647633646 3.682227034 1 1 1 0.25 dme-miR-92b-3p 6mer3-8 GTGCAA 2L 18661728 18661733 + 2L_18661728_18661733_+ 0.999937858 0.999999922 0.99996889 4.38E-05 MESR3 FBtr0343808|FBtr0329971|FBtr0329972|FBtr0081073 18661050|18661104|18661050|18661050 18661776|18661776|18661776|18661776 2L + 18661629 18661772 3'utr MESR3 FlyBase G5090.1 ACATAAATATATATGCTATATTACACCTATCTATATATTATATATAGCTCTAAGCATTACATCATAGCCACTTGTCTGTATGAACTTCATATTTTGCCTGTGCAAAACAATCGCGAGAATCAAATAAAGCTGACAAAGAGAGCC 39 18661701 0.983022018 21 33 287 0.860465116 1.091080469 0.069767442 0.102564103 0.186046512 39 4 2 37 2L:18661629-18661772 6 MESR3 FBtr0081073|FBtr0329972|FBtr0329971|FBtr0343808 18661050|18661050|18661104|18661050 18661776|18661776|18661776|18661776 GTGCAA 6mer3-8 dme-miR-92b-3p 2L + 18661687 18661774 3'utr MESR3 FlyBase G3965.1 ACATCATAGCCACTTGTCTGTATGAACTTCATATTTTGCCTGTGCAAAACAATCGCGAGAATCAAATAAAGCTGACAAAGAGAGCCAA 15 18661704 0.982719571 8 13 102 0.846153846 1.342422681 0.076923077 0.466666667 0.692307692 15 4 0 22 2L:18661687-18661774 6 8 173 FBgn0032694 1795.86 104.38 160.0933333 0.00445469 0.076643035 0.04997085 27 24 25.5 0.25 dme-miR-79-3p 7mer-A1 AGCTTTA 2L 18684620 18684626 - 2L_18684620_18684626_- 0.756589476 0.756023068 0.756306272 0.000400505 msl-1 FBtr0081130 18683718 18685245 2L - 18684561 18684647 3'utr msl-1 FlyBase G11388.1 TTAGATTGGTTAACTCATCTCAGCTTTATCACCTTTAAAATCGCCCGCACTAAAGTGATAAGAACACGAAAGATATTCACATAAGTT 35 18684628 0.991579344 4 30 316 0.780487805 1.204119983 0.073170732 0.085714286 0.219512195 35 8 1 32 2L:18684561-18684647 7 msl-1 FBtr0081130 18683718 18685245 AGCTTTA 7mer-A1 dme-miR-79-3p 2L - 18684600 18684664 3'utr msl-1 FlyBase G8752.1 TCAAACCAGTCGCTTAGTTAGATTGGTTAACTCATCTCAGCTTTATCACCTTTAAAATCGCCCGC 23 18684630 0.990693712 6 20 213 0.9375 1.176091259 0.1875 0.260869565 0.46875 23 1 1 30 2L:18684600-18684664 7 26.5 174 FBgn0005617 2040.813333 60.53666667 92.9 0.012985019 0.437751225 0.28525296 2 4 3 0.25 dme-miR-2a-2-5p 7mer-A1 GATGAGA 2L 18684905 18684911 - 2L_18684905_18684911_- 0.621659929 0.652407792 0.63703386 0.021742049 msl-1 FBtr0081130 18683718 18685245 2L - 18684860 18684924 3'utr msl-1 FlyBase G11390.1 TCGTTTCTTATGCGATGAGAGATCTTAAAAGGCAAGTAAATTGAGCTGTCCTATTCAAACATTTT 7 18684914 0.988381823 5 6 51 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 2L:18684860-18684924 7 msl-1 FBtr0081130 18683718 18685245 GATGAGA 7mer-A1 dme-miR-2a-2-5p 2L - 18684891 18684931 3'utr msl-1 FlyBase G8753.1 AGTTTTGTCGTTTCTTATGCGATGAGAGATCTTAAAAGGCA 7 18684914 0.812968305 3 7 57 1 1.041392685 0.090909091 0.285714286 0.545454545 7 0 0 11 2L:18684891-18684931 7 4.5 175 FBgn0005617 2040.813333 60.53666667 92.9 0.002205003 0.074335114 0.048439182 3 3 3 0.25 dme-miR-283-5p 8mer-A1 TGATATTA 2L 18698010 18698017 + 2L_18698010_18698017_+ 0.390853498 0.395405556 0.393129527 0.003218821 CG10338 FBtr0343108|FBtr0081096 18697884|18697884 18698571|18698571 2L + 18697947 18698031 3'utr CG10338 FlyBase G5103.1 AATTTCATTAGACTTCATTATCATTCTCACATATCTCACATGGCTACCATAGAGCGAAAACATTGATATTAACTAAGTGCTATTG 16 18698009 0.897352355 4 16 108 1 1.255272505 0.222222222 0.125 0.222222222 16 0 0 18 2L:18697947-18698031 8 CG10338 FBtr0081096|FBtr0343108 18697884|18697884 18698571|18698571 TGATATTA 8mer-A1 dme-miR-283-5p 2L + 18697977 18698020 3'utr CG10338 FlyBase G3975.1 ATATCTCACATGGCTACCATAGAGCGAAAACATTGATATTAACT 8 18698009 0.968120893 2 7 41 0.928571429 1.113943352 0 0.5 0.714285714 8 1 0 13 2L:18697977-18698020 8 8.5 176 FBgn0032700 302.7966667 15.66333333 24.19 0.028071643 0.542668653 0.35138487 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 18701315 18701321 - 2L_18701315_18701321_- 0.75417491 0.753431849 0.753803379 0.000525451 CG10376 FBtr0081128|FBtr0081128|FBtr0081128 18700604|18700604|18700604 18701626|18701626|18701626 2L - 18701307 18701334 3'utr CG10376 FlyBase G11433.1 CGCAATCGTTTAATGTGATACAACGAAA 6 18701322 0.680065494 5 6 35 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2L:18701307-18701334 7 CG10376 FBtr0081128|FBtr0081128|FBtr0081128 18700604|18700604|18700604 18701626|18701626|18701626 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 18701309 18701368 3'utr CG10376 FlyBase G8783.1 ATATAATCCATTTTCTAAAAGATTATTGAACGTACGCAATCGTTTAATGTGATACAACGA 5 18701322 0.977643299 4 5 39 1 0.698970004 0 0 0 5 0 0 5 2L:18701309-18701368 7 4.5 177 FBgn0032702 2337.326667 113.6933333 174.6866667 0.001925276 0.039580157 0.025760409 1 1 1 0.25 dme-miR-305-5p 7mer-A1 GTACAAA 2L 18701559 18701565 - 2L_18701559_18701565_- 0.782674906 0.765731824 0.774203365 0.011980581 CG10376 FBtr0081128 18700604 18701626 2L - 18701546 18701587 3'utr CG10376 FlyBase G11434.1 CGCCTTGGGATGGGTTAATTTTGTACAAATTCAAAGCAACTT 10 18701568 0.925135535 5 8 87 0.923076923 0.77815125 0.076923077 0.2 0.384615385 10 0 1 12 2L:18701546-18701587 7 CG10376 FBtr0081128 18700604 18701626 GTACAAA 7mer-A1 dme-miR-305-5p 2L - 18701555 18701591 3'utr CG10376 FlyBase G8784.1 TACCCGCCTTGGGATGGGTTAATTTTGTACAAATTCA 6 18701567 0.917906071 3 5 48 1 0.84509804 0.428571429 0.166666667 0.285714286 6 0 0 7 2L:18701555-18701591 7 6.5 178 FBgn0032702 2337.326667 113.6933333 174.6866667 0.002780955 0.057171338 0.03720948 3 2 2.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 18704413 18704419 + 2L_18704413_18704419_+ 0.731174945 0.731127756 0.731151351 3.33E-05 CG10343 FBtr0081098|FBtr0081098|FBtr0081098 18704335|18704335|18704335 18704454|18704454|18704454 2L + 18704368 18704427 3'utr CG10343 FlyBase G5115.1 CATCGAGGAAACCTTAAATTGAAATCAAAAGCCAATACTATTTTATGTGATAGAATAAAC 13 18704409 0.975584137 4 11 100 0.857142857 1.079181246 0.142857143 0.076923077 0.142857143 13 2 0 12 2L:18704368-18704427 7 CG10343 FBtr0081098|FBtr0081098|FBtr0081098 18704335|18704335|18704335 18704454|18704454|18704454 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 18704372 18704452 3'utr CG10343 FlyBase G3989.1 GAGGAAACCTTAAATTGAAATCAAAAGCCAATACTATTTTATGTGATAGAATAAACGCGAGTAACTGCATGGGCGGCTATC 7 18704409 0.98105319 4 7 43 1 1 0 0.428571429 0.6 7 0 0 10 2L:18704372-18704452 7 7 179 FBgn0032703 216.33 32.94333333 50.78 0.032357972 0.212486087 0.137849547 4 4 4 0.25 dme-bantam-3p 6mer3-8 TGATCT 2L 18706342 18706347 - 2L_18706342_18706347_- 0.991520925 0.931874689 0.961697807 0.042176232 Faf FBtr0343115 18706008 18706532 2L - 18706325 18706360 3'utr Faf FlyBase G11452.1 TAGGTTGATTCTCTGATCTGCCCAACACCATCAACC 6 18706344 0.727158865 3 6 36 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2L:18706325-18706360 6 Faf FBtr0343115 18706008 18706532 TGATCT 6mer3-8 dme-bantam-3p 2L - 18706322 18706359 3'utr Faf FlyBase G8799.1 AGGTTGATTCTCTGATCTGCCCAACACCATCAACCAAC 5 18706342 0.964017397 2 5 27 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 2L:18706322-18706359 6 5.5 180 FBgn0025608 1253.34 66.89333333 102.5866667 0.004388275 0.08222045 0.053613205 -3 -5 -4 0.25 dme-miR-980-3p 6mer3-8 GGCAGC 2L 18711278 18711283 - 2L_18711278_18711283_- 0.968308536 0.999106058 0.983707297 0.021777192 Irk3 FBtr0081125|FBtr0343114 18711069|18711069 18711336|18711336 2L - 18711248 18711297 3'utr Irk3 FlyBase G11464.1 CGCATTACACTTTTGGCAGCACTATATTAATAACGAATTCAAAAACATTT 8 18711284 0.988187978 3 7 62 1 0.954242509 0 0.125 0.222222222 8 0 0 9 2L:18711248-18711297 6 Irk3 FBtr0081125|FBtr0343114 18711069|18711069 18711336|18711336 GGCAGC 6mer3-8 dme-miR-980-3p 2L - 18711262 18711297 3'utr Irk3 FlyBase G8807.1 CGCATTACACTTTTGGCAGCACTATATTAATAACGA 5 18711284 0.950480016 2 4 32 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2L:18711262-18711297 6 5 181 FBgn0032706 11.00333333 0.756666667 1.173333333 0.454407755 6.607929515 4.261363636 1 1 1 0.25 dme-miR-1008-3p 6mer3-8 AGCTGT 2L 18833929 18833934 - 2L_18833929_18833934_- 0.970960752 0.924339872 0.947650312 0.032965955 CG10600 FBtr0273228|FBtr0081120|FBtr0331194 18833708|18833708|18833708 18834497|18834497|18834497 2L - 18833915 18833962 3'utr CG10600 FlyBase G11474.1 AAGTTTTTTAATGCAGGCTGGTACACTGAGCTGTTATAGTGTGTATTT 5 18833936 0.9850188 3 4 39 0.8 0.602059991 0.2 0 0 5 1 0 4 2L:18833915-18833962 6 CG10600 FBtr0331194|FBtr0081120|FBtr0273228 18833708|18833708|18833708 18834497|18834497|18834497 AGCTGT 6mer3-8 dme-miR-1008-3p 2L - 18833916 18833962 3'utr CG10600 FlyBase G8816.1 AAGTTTTTTAATGCAGGCTGGTACACTGAGCTGTTATAGTGTGTATT 9 18833937 0.805101533 6 9 66 1 1.041392685 0.090909091 0.111111111 0.272727273 9 0 0 11 2L:18833916-18833962 6 5 182 FBgn0032717 1261.5 29.36666667 45.24666667 0.003963535 0.170261067 0.110505378 2 3 2.5 0.25 dme-miR-283-5p 6mer2-7 GATATT 2L 18834198 18834203 - 2L_18834198_18834203_- 0.996819977 0.995215597 0.996017787 0.001134482 CG10600 FBtr0273228|FBtr0081120|FBtr0331194 18833708|18833708|18833708 18834497|18834497|18834497 2L - 18834178 18834256 3'utr CG10600 FlyBase G11476.1 GCAGGAGTCGCTATTATACCATTTATTTTGAAAATTGTTATTCCTTGTTCTGCGATATTGAGCAGCCACAGTTTTGTGC 23 18834208 0.990206449 8 22 221 0.962962963 1.414973348 0.296296296 0.173913043 0.296296296 23 1 0 26 2L:18834178-18834256 6 CG10600 FBtr0331194|FBtr0081120|FBtr0273228 18833708|18833708|18833708 18834497|18834497|18834497 GATATT 6mer2-7 dme-miR-283-5p 2L - 18834183 18834226 3'utr CG10600 FlyBase G8818.1 AAAATTGTTATTCCTTGTTCTGCGATATTGAGCAGCCACAGTTT 18 18834208 0.991854551 4 14 163 0.878787879 0.860338007 0.090909091 0.555555556 0.757575758 18 1 3 29 2L:18834183-18834226 6 17.5 183 FBgn0032717 1261.5 29.36666667 45.24666667 0.013872374 0.595913734 0.386768823 5 5 5 0.25 dme-bantam-3p 7mer-A1 GATCTCA 2L 18834354 18834360 - 2L_18834354_18834360_- 0.771270732 0.512053707 0.641662219 0.183294098 CG10600 FBtr0273228|FBtr0081120|FBtr0331194 18833708|18833708|18833708 18834497|18834497|18834497 2L - 18834334 18834394 3'utr CG10600 FlyBase G11477.1 AACGGATTTCGAGTAGCTGAATCCTTTAAAGGAAGATCTCAACTCTGAAAGGGATTTCAAT 25 18834371 0.670145898 10 25 145 1 1.477121255 0.066666667 0.16 0.3 25 0 0 30 2L:18834334-18834394 7 CG10600 FBtr0331194|FBtr0081120|FBtr0273228 18833708|18833708|18833708 18834497|18834497|18834497 GATCTCA 7mer-A1 dme-bantam-3p 2L - 18834309 18834395 3'utr CG10600 FlyBase G8819.1 AAACGGATTTCGAGTAGCTGAATCCTTTAAAGGAAGATCTCAACTCTGAAAGGGATTTCAATACTTACTGAAGGTTGGCCATACAAT 21 18834373 0.930348484 9 18 128 0.766666667 0.662757832 0.1 0.333333333 0.533333333 21 3 4 23 2L:18834309-18834395 7 12.5 184 FBgn0032717 1261.5 29.36666667 45.24666667 0.009908839 0.425652667 0.276263445 11 13 12 0.25 dme-miR-282-5p 7mer-m8 AGAGGCT 2L 18834458 18834464 - 2L_18834458_18834464_- 0.609262347 0.579736093 0.59449922 0.020878176 CG10600 FBtr0273228|FBtr0081120|FBtr0331194 18833708|18833708|18833708 18834497|18834497|18834497 2L - 18834425 18834570 stop_codon CG10600 FlyBase G11478.1 CTCATCATCGACATCCTCGGCAACAACGAATAGTTCGCTCTCCTCTTACGCCGGTTCCAACAATAGCTTTTGAAACTGGGAAAAGAAATGGACGGAAAGCGAGAGTAGAGGCTCCTATTTGGACTTTATGTGAAACTATATATTTT 271 18834465 0.97438594 18 269 1661 0.993865031 2.51054501 0.457055215 0.162361624 0.303680982 271 2 0 324 2L:18834425-18834570 7 CG10600 FBtr0331194|FBtr0081120|FBtr0273228 18833708|18833708|18833708 18834497|18834497|18834497 AGAGGCT 7mer-m8 dme-miR-282-5p 2L - 18834419 18834523 stop_codon CG10600 FlyBase G8820.1 ACGCCGGTTCCAACAATAGCTTTTGAAACTGGGAAAAGAAATGGACGGAAAGCGAGAGTAGAGGCTCCTATTTGGACTTTATGTGAAACTATATATTTTGTAAAT 195 18834451 0.912020358 16 187 1261 0.964788732 1.960629308 0.461267606 0.317948718 0.531690141 195 8 2 274 2L:18834419-18834523 7 206 185 FBgn0032717 1261.5 29.36666667 45.24666667 0.163297662 7.014755959 4.552821571 1 -13 -6 0.25 dme-miR-92b-3p 6mer3-8 GTGCAA 2L 18958064 18958069 - 2L_18958064_18958069_- 0.852806636 0.894190587 0.873498611 0.029262907 Nak FBtr0340325|FBtr0081187 18957730|18957898 18958299|18958299 2L - 18957985 18958090 3'utr Nak FlyBase G11532.1 AATACCTATAACTGTTATTTAGTGCAAAAATTTAAACTAGTTTTAGAAGCGAAACATGTTTTAGAATTTATACAGTGCGTAAGTTTACCAAAGTTACATTTATTTT 21 18958072 0.985143957 8 20 171 0.96 1.380211242 0.04 0.19047619 0.32 21 1 0 24 2L:18957985-18958090 6 Nak FBtr0081187|FBtr0340325 18957898|18957730 18958299|18958299 GTGCAA 6mer3-8 dme-miR-92b-3p 2L - 18958058 18958096 3'utr Nak FlyBase G8856.1 AAGAACAATACCTATAACTGTTATTTAGTGCAAAAATTT 8 18958072 0.698491242 4 8 76 1 1.176091259 0 0.375 0.666666667 8 0 0 15 2L:18958058-18958096 6 11 186 FBgn0015772 651.1433333 17.45333333 26.77666667 0.016893362 0.630252101 0.410805428 3 3 3 0.25 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 18961469 18961476 - 2L_18961469_18961476_- 0.560855926 0.603570067 0.582212996 0.0302035 Nak FBtr0340326|FBtr0081189 18960925|18961114 18962750|18962873 2L - 18961463 18961492 3'utr Nak FlyBase G11544.1 AATTGAAATGTTCAATTAGCTTTAATTACT 12 18961477 0.785599795 2 12 109 1 1.204119983 0.25 0.166666667 0.375 12 0 0 16 2L:18961463-18961492 8 Nak FBtr0081189|FBtr0340326 18961114|18960925 18962873|18962750 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 18961453 18961525 3'utr Nak FlyBase G8866.1 TGATCACTTTTGTTCTCTACACACAGACACACCAATTGAAATGTTCAATTAGCTTTAATTACTACTCTTGTTA 10 18961477 0.985264676 5 9 84 0.9375 1.176091259 0.0625 0.3 0.5625 10 1 0 15 2L:18961453-18961525 8 8.5 187 FBgn0015772 651.1433333 17.45333333 26.77666667 0.013053961 0.487012987 0.317440558 1 1 1 0.25 dme-miR-8-3p 7mer-m8 CAGTATT 2L 18977655 18977661 - 2L_18977655_18977661_- 0.630380349 0.626955879 0.628668114 0.002421416 Swip-1 FBtr0340322 18977517 18978354 2L - 18977634 18977685 3'utr Swip-1 FlyBase G11555.2 AAAGTAAAACAATAAGTTTCGATTCAGTATTTCACGTTTAAAGTTAGCGATT 72 18977663 0.780386058 7 64 605 0.875 1.886490725 0.056818182 0.208333333 0.352272727 72 11 0 77 2L:18977634-18977685 7 Swip-1 FBtr0340322 18977517 18978354 CAGTATT 7mer-m8 dme-miR-8-3p 2L - 18977594 18977690 3'utr Swip-1 FlyBase G8872.1 AGCCTAAAGTAAAACAATAAGTTTCGATTCAGTATTTCACGTTTAAAGTTAGCGATTTAAGCAATACTAATGCGTTAAATACGAATACACAAGAAAA 69 18977663 0.98739128 9 65 564 0.944954128 1.53571597 0.082568807 0.449275362 0.651376147 69 4 2 103 2L:18977594-18977690 7 66 188 FBgn0032731 3016.77 219.0933333 334.6766667 0.021877704 0.30124148 0.197205263 2 2 2 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 19008169 19008176 + 2L_19008169_19008176_+ 0.483089532 0.426929915 0.455009724 0.039710834 CG31793 FBtr0340318|FBtr0081138 19008052|19008052 19008234|19008234 2L + 19008129 19008187 3'utr CG31793 FlyBase G5156.1 TCGTGGTCATAGATTCAGTTTTATAGAATACAAAACGTTTGTACTTAAGGGAGTAAAGC 19 19008168 0.797798843 3 19 146 1 1.342422681 0.045454545 0.157894737 0.272727273 19 0 0 22 2L:19008129-19008187 8 CG31793 FBtr0081138|FBtr0340318 19008052|19008052 19008234|19008234 GTACTTAA 8mer-A1 dme-miR-252-5p 2L + 19008131 19008187 3'utr CG31793 FlyBase G4010.1 GTGGTCATAGATTCAGTTTTATAGAATACAAAACGTTTGTACTTAAGGGAGTAAAGC 11 19008142 0.976547565 3 11 84 1 1.146128036 0.142857143 0.272727273 0.428571429 11 0 0 14 2L:19008131-19008187 8 8 189 FBgn0051793 240.37 6.446666667 9.863333333 0.033282024 1.240951396 0.811084826 1 27 14 0.25 dme-miR-305-3p 6mer3-8 ATGTGC 2L 19041244 19041249 + 2L_19041244_19041249_+ 0.953695298 0.947553192 0.950624245 0.004343121 mib2 FBtr0336840|FBtr0336841|FBtr0081142 19041121|19041121|19041121 19041473|19041541|19041541 2L + 19041211 19041257 3'utr mib2 FlyBase G5181.1 CACAAAACAAACACACACTCACATTGCCGTGTCATGTGCAAATCGAA 6 19041235 0.959420325 4 6 30 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 2L:19041211-19041257 6 mib2 FBtr0336840|FBtr0336841|FBtr0081142 19041121|19041121|19041121 19041473|19041541|19041541 ATGTGC 6mer3-8 dme-miR-305-3p 2L + 19041227 19041269 3'utr mib2 FlyBase G4026.1 ACTCACATTGCCGTGTCATGTGCAAATCGAAATTATTATTTAT 6 19041235 0.784715718 4 5 37 0.714285714 0.698970004 0.285714286 0.166666667 0.285714286 6 2 0 5 2L:19041227-19041269 6 4 190 FBgn0086442 1398.326667 43.78666667 67.22333333 0.002860562 0.09135201 0.059503149 9 9 9 0.25 dme-miR-932-5p 7mer-A1 GAATTGA 2L 19069567 19069573 + 2L_19069567_19069573_+ 0.820349588 0.821593774 0.820971681 0.000879782 CG17343 FBtr0081151 19065246 19069673 2L + 19069535 19069593 3'utr CG17343 FlyBase G5242.1 TTGTGCTTTTTCGCGCACTGCAAGCGAAATTAGAATTGATCGTCGTAGTTCACTAATAT 37 19069570 0.7690261 7 33 303 0.886363636 1.290034611 0.068181818 0.162162162 0.295454545 37 4 1 39 2L:19069535-19069593 7 CG17343 FBtr0081151 19065246 19069673 GAATTGA 7mer-A1 dme-miR-932-5p 2L + 19069534 19069597 3'utr CG17343 FlyBase G4075.1 CTTGTGCTTTTTCGCGCACTGCAAGCGAAATTAGAATTGATCGTCGTAGTTCACTAATATATTT 30 19069570 0.730505974 7 29 235 0.96969697 1.505149978 0.060606061 0.1 0.181818182 30 1 0 32 2L:19069534-19069597 7 29.5 191 FBgn0032751 35 7.813333333 11.57333333 0.842857143 3.77559727 2.548963134 -3 -3 -3 0.25 dme-miR-8-3p 6mer2-7 AGTATT 2L 19172669 19172674 + 2L_19172669_19172674_+ 0.967565133 0.999721187 0.98364316 0.022737796 brat FBtr0081160 19171258 19179758 2L + 19172635 19172683 3'utr brat FlyBase G5280.1 GTATCTTGAGGATGTGTGTGCATAGATCTAATTGAGTATTTAAAAGTAA 12 19172666 0.798441665 7 12 98 1 1.255272505 0.111111111 0.25 0.5 12 0 0 18 2L:19172635-19172683 6 brat FBtr0081160 19171258 19179758 AGTATT 6mer2-7 dme-miR-8-3p 2L + 19172630 19172684 3'utr brat FlyBase G4109.1 TCAAAGTATCTTGAGGATGTGTGTGCATAGATCTAATTGAGTATTTAAAAGTAAC 12 19172652 0.670140593 6 12 100 1 1.397940009 0.36 0.666666667 0.84 12 0 0 25 2L:19172630-19172684 6 4.5 192 FBgn0010300 4742.333333 86.64666667 133.0666667 0.0009489 0.051935062 0.033817635 3 17 10 0.25 dme-miR-304-5p 8mer-A1 TGAGATTA 2L 19173529 19173536 + 2L_19173529_19173536_+ 0.501110821 0.426404913 0.463757867 0.052825048 brat FBtr0081160 19171258 19179758 2L + 19173494 19173548 3'utr brat FlyBase G5288.1 GATAATTACCTATGTTTTGTGTGTATCTACTTAAGTGAGATTATTAAATATACGA 23 19173528 0.969755715 8 21 212 0.923076923 1.380211242 0.038461538 0.086956522 0.192307692 23 2 0 24 2L:19173494-19173548 8 brat FBtr0081160 19171258 19179758 TGAGATTA 8mer-A1 dme-miR-304-5p 2L + 19173507 19173549 3'utr brat FlyBase G4117.1 GTTTTGTGTGTATCTACTTAAGTGAGATTATTAAATATACGAA 22 19173528 0.748183524 6 18 181 0.848484848 1.447158031 0.03030303 0.363636364 0.575757576 22 5 0 28 2L:19173507-19173549 8 20.5 193 FBgn0010300 4742.333333 86.64666667 133.0666667 0.004322767 0.23659306 0.154058116 1 1 1 0.25 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 2L 19174189 19174194 + 2L_19174189_19174194_+ 0.54525757 0.939040149 0.742148859 0.278446276 brat FBtr0081160|FBtr0081160 19171258|19171258 19179758|19179758 2L + 19174136 19174208 3'utr brat FlyBase G5293.1 CAACCCAACAACAAATGCCACAAAAACCAACTGAAAAACCATTAAAGATTTTATACTTATTCTGATAAAAAGA 10 19174195 0.999834673 8 10 53 1 1.079181246 0.166666667 0.2 0.333333333 10 0 0 12 2L:19174136-19174208 6 brat FBtr0081160|FBtr0081160 19171258|19171258 19179758|19179758 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 2L + 19174140 19174199 3'utr brat FlyBase G4121.1 CCAACAACAAATGCCACAAAAACCAACTGAAAAACCATTAAAGATTTTATACTTATTCTG 8 19174177 0.962709418 6 8 40 1 1 0.2 0.25 0.4 8 0 0 10 2L:19174140-19174199 6 4.5 194 FBgn0010300 4742.333333 86.64666667 133.0666667 0.0009489 0.051935062 0.033817635 -6 12 3 0.25 dme-miR-14-3p 6mer2-7 AGACTG 2L 19174483 19174488 + 2L_19174483_19174488_+ 0.715129531 0.605855827 0.660492679 0.077268174 brat FBtr0081160 19171258 19179758 2L + 19174464 19174502 3'utr brat FlyBase G5294.1 GATGAATTGAGAATCTAATAGACTGTGCAACCACAAAAA 46 19174482 0.891133762 5 44 235 0.96 1.380211242 0 0.086956522 0.16 46 1 1 48 2L:19174464-19174502 6 brat FBtr0081160 19171258 19179758 AGACTG 6mer2-7 dme-miR-14-3p 2L + 19174459 19174503 3'utr brat FlyBase G4122.1 AAATTGATGAATTGAGAATCTAATAGACTGTGCAACCACAAAAAT 40 19174489 0.960105864 5 35 205 0.876923077 1.056904851 0 0.45 0.661538462 40 4 4 57 2L:19174459-19174503 6 42.5 195 FBgn0010300 4742.333333 86.64666667 133.0666667 0.008961833 0.490497807 0.319388778 1 -6 -2.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 19177915 19177922 + 2L_19177915_19177922_+ 0.631090827 0.620416036 0.625753431 0.007548223 brat FBtr0336627|FBtr0081160 19177522|19171258 19179758|19179758 2L + 19177881 19177935 3'utr brat FlyBase G5295.1 ATATAGTGCAACTAAGCCGATCATGGTATCATCATCTAGTCATCATGCATACATA 17 19177912 0.980899443 7 17 122 1 1.380211242 0.041666667 0.352941176 0.541666667 17 0 0 24 2L:19177881-19177935 8 brat FBtr0336627|FBtr0081160 19177522|19171258 19179758|19179758 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L + 19177876 19177930 3'utr brat FlyBase G4123.1 ACGCTATATAGTGCAACTAAGCCGATCATGGTATCATCATCTAGTCATCATGCAT 8 19177915 0.981039364 3 8 58 1 1.176091259 0 0.625 0.8 8 0 0 15 2L:19177876-19177930 8 11.5 196 FBgn0010300 4742.333333 86.64666667 133.0666667 0.002424967 0.132722936 0.086422846 3 0 1.5 0.25 dme-miR-318-3p 8mer-A1 CCCAGTGA 2L 19390517 19390524 - 2L_19390517_19390524_- 0.5389915 0.635076269 0.587033885 0.067942214 CG17544 FBtr0081216|FBtr0300822|FBtr0081218|FBtr0081217 19390368|19390368|19390368|19390368 19390668|19390668|19390668|19390668 2L - 19390510 19390542 3'utr CG17544 FlyBase G11650.1 ATGGCCAACTACATTGATCCCAGTGAAAGGTTT 12 19390529 0.694743677 2 12 61 1 1.113943352 0.153846154 0.083333333 0.153846154 12 0 0 13 2L:19390510-19390542 8 CG17544 FBtr0081217|FBtr0081218|FBtr0300822|FBtr0081216 19390368|19390368|19390368|19390368 19390668|19390668|19390668|19390668 CCCAGTGA 8mer-A1 dme-miR-318-3p 2L - 19390507 19390541 3'utr CG17544 FlyBase G8947.1 TGGCCAACTACATTGATCCCAGTGAAAGGTTTTTT 8 19390528 0.679659964 2 7 48 0.9 0.653212514 0 0.125 0.3 8 0 1 9 2L:19390507-19390541 8 10 197 FBgn0032775 1454.426667 69.89666667 107.4566667 0.006875562 0.143068339 0.093060769 5 4 4.5 0.25 dme-miR-31a-5p 8mer-A1 TCTTGCCA 2L 19429101 19429108 + 2L_19429101_19429108_+ 0.594162687 0.528358311 0.561260499 0.046530737 CG16771 FBtr0334164|FBtr0302874|FBtr0302938|FBtr0334165|FBtr0081204 19429037|19429037|19429037|19429037|19429037 19429224|19429224|19429224|19429224|19429224 2L + 19429057 19429161 3'utr CG16771 FlyBase G5315.1 AGCCAACAAAACACTTTGATATATGTAGTTATAATGAAAACTGTTCTTGCCAAGCTTACAAATTAGATATAAGTCAAAGATTGGGTCACCGAAATAGGACATGAG 42 19429100 0.974806979 13 40 272 0.97826087 1.653212514 0.260869565 0.095238095 0.173913043 42 1 0 45 2L:19429057-19429161 8 CG16771 FBtr0334165|FBtr0302938|FBtr0302874|FBtr0334164|FBtr0081204 19429037|19429037|19429037|19429037|19429037 19429224|19429224|19429224|19429224|19429224 TCTTGCCA 8mer-A1 dme-miR-31a-5p 2L + 19429056 19429114 3'utr CG16771 FlyBase G4133.1 TAGCCAACAAAACACTTTGATATATGTAGTTATAATGAAAACTGTTCTTGCCAAGCTTA 25 19429100 0.98478031 3 19 169 0.794117647 0.73239376 0.235294118 0.28 0.470588235 25 3 4 27 2L:19429056-19429114 8 23 198 FBgn0032779 937.25 47.39333333 72.85666667 0.024539877 0.485300324 0.315688338 1 1 1 0.25 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 19435335 19435342 + 2L_19435335_19435342_+ 0.545645377 0.581006186 0.563325781 0.025003861 Rab9 FBtr0081206 19435305 19435841 2L + 19435278 19435396 stop_codon Rab9 FlyBase G5327.1 AGGCGCCAGCCACCAATTATCGGCTATGAGCAGACAGACAGGAGCTGTCAGGAAACTTACGCTTAATTTAACCACTCACCCCGCCGGGTTGACCTTCAGATTCAATGCATTCCAGTCCG 230 19435334 0.980366963 11 226 1628 0.985185185 1.947760382 0.022222222 0.12173913 0.251851852 230 2 2 266 2L:19435278-19435396 8 Rab9 FBtr0081206 19435305 19435841 TACGCTTA 8mer-A1 dme-miR-965-3p 2L + 19435284 19435408 stop_codon Rab9 FlyBase G4142.1 CAGCCACCAATTATCGGCTATGAGCAGACAGACAGGAGCTGTCAGGAAACTTACGCTTAATTTAACCACTCACCCCGCCGGGTTGACCTTCAGATTCAATGCATTCCAGTCCGCGGAGGGGCAGG 104 19435334 0.979911182 11 100 697 0.966216216 2.155336037 0.060810811 0.307692308 0.513513514 104 5 0 143 2L:19435284-19435408 8 158.5 199 FBgn0032782 68.33333333 5.243333333 8.043333333 2.319512195 30.22886205 19.70576046 1 1 1 0.25 dme-bantam-3p 6mer2-7 GATCTC 2L 19435546 19435551 + 2L_19435546_19435551_+ 0.955835586 0.986456927 0.971146257 0.021652529 Rab9 FBtr0081206 19435305 19435841 2L + 19435521 19435580 3'utr Rab9 FlyBase G5329.1 GAGCTAGCTTCTATGTCAAGAATAGGATCTCCATTTTTACTTGCTATGCTTTAATATTAT 26 19435555 0.692278769 9 24 201 0.894736842 1.531478917 0.078947368 0.346153846 0.552631579 26 4 0 34 2L:19435521-19435580 6 Rab9 FBtr0081206 19435305 19435841 GATCTC 6mer2-7 dme-bantam-3p 2L + 19435436 19435561 3'utr Rab9 FlyBase G4143.1 ACCCAATGTTGATGGCTGTAGAGAGTGGATTGCCTCGTTGTGGTTGATATTCTAAGGGAACTATGCTTCACAGCGAGCTAACTATGAGCTAGCTTCTATGTCAAGAATAGGATCTCCATTTTTACT 33 19435554 0.777402925 11 30 217 0.886792453 1.672097858 0.264150943 0.393939394 0.622641509 33 6 0 47 2L:19435436-19435561 6 16 200 FBgn0032782 68.33333333 5.243333333 8.043333333 0.234146341 3.051493961 1.989225031 -9 -8 -8.5 0.25 dme-bantam-3p 6mer3-8 TGATCT 2L 19443187 19443192 - 2L_19443187_19443192_- 0.76218373 0.614823246 0.688503488 0.104199609 Hs2st FBtr0081288 19442831 19443303 2L - 19443105 19443229 3'utr Hs2st FlyBase G11682.1 TTGTATTGTAAATACGTAATTCTCCTTCGCATAGATTTGATCTGTACTTAAGAGTAACTCATCCGTACACTTAAGCGCTACCTAAGACTTTAGCATTGAATATCGTTGACATATTACTAACCCAA 139 19443187 0.717122147 23 133 1097 0.975 1.892094603 0.225 0.122302158 0.2375 139 3 1 156 2L:19443105-19443229 6 Hs2st FBtr0081288 19442831 19443303 TGATCT 6mer3-8 dme-bantam-3p 2L - 19443129 19443216 3'utr Hs2st FlyBase G8968.1 ACGTAATTCTCCTTCGCATAGATTTGATCTGTACTTAAGAGTAACTCATCCGTACACTTAAGCGCTACCTAAGACTTTAGCATTGAAT 87 19443187 0.785361728 11 83 710 0.961538462 2.096910013 0.176923077 0.379310345 0.584615385 87 5 0 125 2L:19443129-19443216 6 81 201 FBgn0024230 209.3333333 15.55 23.84 0.386942675 5.209003215 3.397651007 -5 -5 -5 0.25 dme-miR-33-5p 7mer-A1 AATGCAA 2L 19497920 19497926 + 2L_19497920_19497926_+ 0.653910811 0.707890771 0.680900791 0.038169624 swm FBtr0081245|FBtr0331325 19497383|19497383 19497978|19497978 2L + 19497901 19497944 3'utr swm FlyBase G5376.1 AAAAAATCGTAGCAACGTGAATGCAAAACAGCAAGTTATATAGA 13 19497919 0.841590246 2 12 40 0.928571429 1.113943352 0.214285714 0.076923077 0.142857143 13 1 0 13 2L:19497901-19497944 7 swm FBtr0331325|FBtr0081245 19497383|19497383 19497978|19497978 AATGCAA 7mer-A1 dme-miR-33-5p 2L + 19497898 19497933 3'utr swm FlyBase G4178.1 AGAAAAAAATCGTAGCAACGTGAATGCAAAACAGCA 14 19497920 0.778568695 2 14 34 1 1.230448921 0.117647059 0.214285714 0.352941176 14 0 0 17 2L:19497898-19497933 7 13 202 FBgn0002044 1462.05 43.20666667 66.00333333 0.008891625 0.300879494 0.19695975 1 0 0.5 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 19502970 19502975 - 2L_19502970_19502975_- 0.993087648 0.993495841 0.993291745 0.000288641 CG10188 FBtr0329963|FBtr0081283|FBtr0081282 19502333|19502333|19502333 19503098|19503128|19503128 2L - 19502956 19502999 3'utr CG10188 FlyBase G11737.1 ATGTACTTCCATACCTGTTGAACTGTACCTATACCATTCGAAAA 32 19502976 0.739775857 5 32 232 1 1.591064607 0.256410256 0.1875 0.333333333 32 0 0 39 2L:19502956-19502999 6 CG10188 FBtr0081282|FBtr0081283|FBtr0329963 19502333|19502333|19502333 19503128|19503128|19503098 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L - 19502957 19502998 3'utr CG10188 FlyBase G9023.1 TGTACTTCCATACCTGTTGAACTGTACCTATACCATTCGAAA 31 19502976 0.670337714 3 31 200 1 1.568201724 0.324324324 0.161290323 0.297297297 31 0 0 37 2L:19502957-19502998 6 27 203 FBgn0032796 423.2433333 9.72 14.90666667 0.06379309 2.777777778 1.811270125 1 1 1 0.25 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 19532732 19532739 + 2L_19532732_19532739_+ 0.485493325 0.481870685 0.483682005 0.002561565 CG10137 FBtr0081248 19532669 19532985 2L + 19532716 19532751 3'utr CG10137 FlyBase G5389.1 TTATTAGAGCAACTATTCTAGTCAGGATACCTACTC 87 19532731 0.691852162 7 84 505 0.970588235 1.995635195 0.078431373 0.126436782 0.254901961 87 3 0 99 2L:19532716-19532751 8 CG10137 FBtr0081248 19532669 19532985 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L + 19532670 19532756 3'utr CG10137 FlyBase G4187.1 GAAAGCGTACACTTAATCGATCTATTGGCCTAGCGAATTAGCGAATTTATTAGAGCAACTATTCTAGTCAGGATACCTACTCAAGGA 53 19532731 0.974949412 6 51 318 0.977272727 1.934498451 0.113636364 0.433962264 0.659090909 53 2 0 86 2L:19532670-19532756 8 68 204 FBgn0032800 178.3133333 6.72 10.33 0.38135118 10.11904762 6.582768635 1 1 1 0.25 dme-miR-1003-3p 7mer-A1 TGTGAGA 2L 19536554 19536560 + 2L_19536554_19536560_+ 0.388154105 0.407924283 0.398039194 0.013979642 CG33116 FBtr0081249 19536464 19537363 2L + 19536510 19536575 3'utr CG33116 FlyBase G5399.2 AAGTTTTTCTGTATATCAAGGAGGCTGTTTAGTTAAACAATTCTTGTGAGATTATGTATAATTTGT 103 19536539 0.612808769 16 89 921 0.884297521 1.330413773 0.099173554 0.165048544 0.289256198 103 10 4 107 2L:19536510-19536575 7 CG33116 FBtr0081249 19536464 19537363 TGTGAGA 7mer-A1 dme-miR-1003-3p 2L + 19536428 19536574 stop_codon CG33116 FlyBase G4194.1 AGCCACAAGCGGAGGAGCCATTGAAGAAAGATATATAAGGCATCGGATTGCGCTATTTTGGATTAGTTGCGAGTTATTTTGCAAGTTTTTCTGTATATCAAGGAGGCTGTTTAGTTAAACAATTCTTGTGAGATTATGTATAATTTG 94 19536538 0.990349243 23 86 857 0.930555556 1.649983544 0.069444444 0.404255319 0.611111111 94 8 2 134 2L:19536428-19536574 7 40 205 FBgn0053116 946.2166667 45.74 70.24333333 0.042273616 0.874508089 0.569449058 15 16 15.5 0.25 dme-miR-7-5p 7mer-A1 TCTTCCA 2L 19536674 19536680 + 2L_19536674_19536680_+ 0.52643128 0.619428363 0.572929821 0.06575888 CG33116 FBtr0081249 19536464 19537363 2L + 19536652 19536708 3'utr CG33116 FlyBase G5400.1 AATGACTATTCACGTAATGCTCTCTTCCAATGATAATTTTTAAACTCGGTTTACGGT 59 19536676 0.781261388 4 57 583 0.970149254 1.812913357 0.059701493 0.101694915 0.208955224 59 2 0 65 2L:19536652-19536708 7 CG33116 FBtr0081249 19536464 19537363 TCTTCCA 7mer-A1 dme-miR-7-5p 2L + 19536647 19536697 3'utr CG33116 FlyBase G4195.1 TTTCCAATGACTATTCACGTAATGCTCTCTTCCAATGATAATTTTTAAACT 24 19536676 0.917917245 4 23 225 0.971428571 1.531478917 0 0.25 0.485714286 24 1 0 34 2L:19536647-19536697 7 40 206 FBgn0053116 946.2166667 45.74 70.24333333 0.042273616 0.874508089 0.569449058 -2 -2 -2 0.25 dme-bantam-3p 6mer3-8 TGATCT 2L 19536803 19536808 + 2L_19536803_19536808_+ 0.980858237 0.581170831 0.781014534 0.282621671 CG33116 FBtr0081249 19536464 19537363 2L + 19536718 19536866 3'utr CG33116 FlyBase G5401.1 ACTTGACGTTATCTGTAATCCGTATTGTATCCAAACTTCAAAGACCCCTTGTAGATCGATTGAATTTACGAGTAATCATGACAAGTGATCTAATCTGCTGCTAAGATATCCAATAAGTATTAGGTAGTAGGCTAAAGTAGCGGCCAGGC 43 19536803 0.978171313 14 43 294 1 1.748188027 0.25 0.279069767 0.446428571 43 0 0 56 2L:19536718-19536866 6 CG33116 FBtr0081249 19536464 19537363 TGATCT 6mer3-8 dme-bantam-3p 2L + 19536711 19536859 3'utr CG33116 FlyBase G4196.1 AATTCCCACTTGACGTTATCTGTAATCCGTATTGTATCCAAACTTCAAAGACCCCTTGTAGATCGATTGAATTTACGAGTAATCATGACAAGTGATCTAATCTGCTGCTAAGATATCCAATAAGTATTAGGTAGTAGGCTAAAGTAGCG 36 19536803 0.982036807 11 32 240 0.929824561 1.423245874 0.210526316 0.388888889 0.614035088 36 3 1 53 2L:19536711-19536859 6 29 207 FBgn0053116 946.2166667 45.74 70.24333333 0.030648372 0.634018365 0.412850567 0 0 0 0.25 dme-miR-79-3p 7mer-m8 TAGCTTT 2L 19536934 19536940 + 2L_19536934_19536940_+ 0.611900582 0.591423995 0.601662289 0.014479143 CG33116 FBtr0081249 19536464 19537363 2L + 19536890 19536960 3'utr CG33116 FlyBase G5402.1 TTAACTTTGCAACTACAGAGCAGCTAACTACTTGTTCTAGCCTTTAGCTTTCCAACTTCATTGCTACGGTT 11 19536933 0.989966537 4 11 112 1 1.079181246 0 0.090909091 0.166666667 11 0 0 12 2L:19536890-19536960 7 CG33116 FBtr0081249 19536464 19537363 TAGCTTT 7mer-m8 dme-miR-79-3p 2L + 19536894 19536947 3'utr CG33116 FlyBase G4197.1 CTTTGCAACTACAGAGCAGCTAACTACTTGTTCTAGCCTTTAGCTTTCCAACTT 10 19536933 0.802010323 4 10 85 1 1.204119983 0 0.5 0.6875 10 0 0 16 2L:19536894-19536947 7 8 208 FBgn0053116 946.2166667 45.74 70.24333333 0.008454723 0.174901618 0.113889812 1 1 1 0.25 dme-miR-282-5p 6mer2-7 GAGGCT 2L 19580838 19580843 - 2L_19580838_19580843_- 0.951556664 0.922977385 0.937267024 0.020208617 Hakai FBtr0081263|FBtr0081264 19580610|19580610 19581331|19581331 2L - 19580830 19580869 3'utr Hakai FlyBase G11778.1 CGCTGTTGGCCCAGGTGCCCTGATTGGAGGCTCCACCGAC 6 19580845 0.759629189 2 5 29 1 0.77815125 0.333333333 0 0 6 0 0 6 2L:19580830-19580869 6 Hakai FBtr0081264|FBtr0081263 19580610|19580610 19581331|19581331 GAGGCT 6mer2-7 dme-miR-282-5p 2L - 19580822 19580866 3'utr Hakai FlyBase G9051.1 TGTTGGCCCAGGTGCCCTGATTGGAGGCTCCACCGACGCGCCAAC 6 19580845 0.959170192 3 6 29 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2L:19580822-19580866 6 5 209 FBgn0032812 276.3333333 19.83333333 30.45 0.018094089 0.25210084 0.164203612 2 2 2 0.25 dme-miR-184-3p 6mer2-7 CCGTCC 2L 19581228 19581233 - 2L_19581228_19581233_- 0.717981009 0.933142729 0.825561869 0.152142297 Hakai FBtr0081263|FBtr0081264 19580610|19580610 19581331|19581331 2L - 19581210 19581360 stop_codon Hakai FlyBase G11779.1 GCAAGGCGAGTGGTAGCTATGGCTCCTAAACTAAGCTGTCCTGTCTATAAAAAAACAACCGCTTGCCCCTTGCAGCTCTCCGAGTCGTCTGTCCCCATATCCGTTTCCGCCTCCATTGCGTCCCGTCCCGTCCTGTCGCGGCTGCCACTGA 51 19581235 0.976629298 13 47 315 0.950819672 1.763427994 0.295081967 0.176470588 0.31147541 51 3 0 58 2L:19581210-19581360 6 Hakai FBtr0081264|FBtr0081263 19580610|19580610 19581331|19581331 CCGTCC 6mer2-7 dme-miR-184-3p 2L - 19581200 19581271 3'utr Hakai FlyBase G9052.1 TGTCCCCATATCCGTTTCCGCCTCCATTGCGTCCCGTCCCGTCCTGTCGCGGCTGCCACTGACCGGCGGTGT 20 19581235 0.973533567 7 19 115 0.96 1.079181246 0.24 0.2 0.36 20 0 1 24 2L:19581200-19581271 6 24.5 210 FBgn0032812 276.3333333 19.83333333 30.45 0.088661037 1.235294118 0.804597701 2 2 2 0.25 dme-miR-8-3p 7mer-A1 AGTATTA 2L 19730291 19730297 + 2L_19730291_19730297_+ 0.7606034 0.811631688 0.786117544 0.036082457 Lar FBtr0331242|FBtr0112800|FBtr0331239|FBtr0331240|FBtr0081260|FBtr0331241|FBtr0305950 19730161|19730161|19730161|19730161|19730161|19730161|19730161 19732069|19732069|19731561|19731561|19731561|19731561|19731561 2L + 19730162 19730375 3'utr Lar FlyBase G5452.1 AGTGCATTTCTCAATGGGATTGCCAGGTCCACAGAGCTAAAATCTCATCGACCCTGCGTTCGTTGCATACTTATTTCGAACTCTACGCATAATACGCATTTACGATATACACGGATATCATAACTCTAAAGTATTATAGCCAGCTACTGCCCACACTTACTTAATACACCTATACTTATATACGTGGATATGTTTAGTTGATAAGCGCACCCCC 55 19730297 0.978948744 28 48 331 0.876923077 1.755874856 0.230769231 0.181818182 0.307692308 55 8 0 57 2L:19730162-19730375 7 Lar FBtr0305950|FBtr0081260|FBtr0331241|FBtr0331239|FBtr0331240|FBtr0331242|FBtr0112800 19730161|19730161|19730161|19730161|19730161|19730161|19730161 19731561|19731561|19731561|19731561|19731561|19732069|19732069 AGTATTA 7mer-A1 dme-miR-8-3p 2L + 19730161 19730331 stop_codon Lar FlyBase G4239.1 GAGTGCATTTCTCAATGGGATTGCCAGGTCCACAGAGCTAAAATCTCATCGACCCTGCGTTCGTTGCATACTTATTTCGAACTCTACGCATAATACGCATTTACGATATACACGGATATCATAACTCTAAAGTATTATAGCCAGCTACTGCCCACACTTACTTAATACACC 35 19730298 0.986041395 14 26 214 0.760869565 1.243038049 0.043478261 0.285714286 0.456521739 35 10 1 35 2L:19730161-19730331 7 24 211 FBgn0000464 569.28 8.026666667 12.27666667 0.042158516 2.990033223 1.954928048 -6 -7 -6.5 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 19731199 19731204 + 2L_19731199_19731204_+ 0.795578527 0.711481777 0.753530152 0.059465347 Lar FBtr0331242|FBtr0112800|FBtr0331239|FBtr0331240|FBtr0081260|FBtr0331241|FBtr0305950 19730161|19730161|19730161|19730161|19730161|19730161|19730161 19732069|19732069|19731561|19731561|19731561|19731561|19731561 2L + 19731117 19731223 3'utr Lar FlyBase G5458.1 ATTCCTGTATATACCACAGTCGATACCCGAGCTAGCCACTTATGTATGTGTAATTTAGATTGAAAAGCTATGAAAAGTTATTGTACCTAAGGTGTATGAAGACATAG 35 19731198 0.898902249 8 33 235 0.95 1.278753601 0.425 0.142857143 0.25 35 1 1 38 2L:19731117-19731223 6 Lar FBtr0305950|FBtr0081260|FBtr0331241|FBtr0331239|FBtr0331240|FBtr0331242|FBtr0112800 19730161|19730161|19730161|19730161|19730161|19730161|19730161 19731561|19731561|19731561|19731561|19731561|19732069|19732069 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 19731122 19731226 3'utr Lar FlyBase G4244.1 TGTATATACCACAGTCGATACCCGAGCTAGCCACTTATGTATGTGTAATTTAGATTGAAAAGCTATGAAAAGTTATTGTACCTAAGGTGTATGAAGACATAGAGA 40 19731198 0.933378582 8 37 265 0.947368421 1.431363764 0.298245614 0.375 0.561403509 40 2 1 54 2L:19731122-19731226 6 25.5 212 FBgn0000464 569.28 8.026666667 12.27666667 0.044793423 3.176910299 2.077111051 1 1 1 0.25 dme-miR-1012-3p 7mer-m8 TTGACTA 2L 19736823 19736829 + 2L_19736823_19736829_+ 0.584258295 0.54018527 0.562221782 0.031164317 Nf-YB FBtr0081289|FBtr0343854 19736722|19736722 19737088|19736956 2L + 19736806 19736837 3'utr Nf-YB FlyBase G5466.1 CTAACAGTACACCTTGATTGACTATTTAAGTT 6 19736823 0.874956832 4 6 39 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2L:19736806-19736837 7 Nf-YB FBtr0343854|FBtr0081289 19736722|19736722 19736956|19737088 TTGACTA 7mer-m8 dme-miR-1012-3p 2L + 19736806 19736842 3'utr Nf-YB FlyBase G4249.1 CTAACAGTACACCTTGATTGACTATTTAAGTTAATAT 7 19736824 0.654809606 5 7 62 1 1.079181246 0.083333333 0.428571429 0.666666667 7 0 0 12 2L:19736806-19736842 7 6.5 213 FBgn0032816 140.6666667 20.89666667 32.17 0.046208531 0.311054395 0.202051601 0 -1 -0.5 0.25 dme-miR-79-3p 6mer3-8 TAGCTT 2L 1976453 1976458 - 2L_1976453_1976458_- 0.597446466 0.617159982 0.607303224 0.01393955 CG15356 FBtr0077869 1975461 1976541 2L - 1976393 1976511 3'utr CG15356 FlyBase G6884.1 AGAACGCACACACACACAGCAGACCCGGTTTGAATTAGATTTAGTTGGTAGTTTAGCTTGAATGTCGAAGGTTTTCCCACTAATTTCCAATTATCGCAACCCGCAGCCTTGGAGCAAAG 63 1976459 0.987509438 10 57 511 0.901408451 1.505149978 0.14084507 0.095238095 0.197183099 63 6 1 64 2L:1976393-1976511 6 CG15356 FBtr0077869 1975461 1976541 TAGCTT 6mer3-8 dme-miR-79-3p 2L - 1976438 1976508 3'utr CG15356 FlyBase G5380.1 ACGCACACACACACAGCAGACCCGGTTTGAATTAGATTTAGTTGGTAGTTTAGCTTGAATGTCGAAGGTTT 37 1976459 0.985148426 6 37 303 1 1.755874856 0.263157895 0.486486486 0.666666667 37 0 0 57 2L:1976438-1976508 6 28 214 FBgn0031377 219.9966667 6.103333333 9.273333333 0.127274656 4.587657018 3.019410496 1 1 1 0.25 dme-miR-970-3p 6mer2-7 CTTATG 2L 19793783 19793788 - 2L_19793783_19793788_- 0.999999995 0.999352559 0.999676277 0.000457781 fs(2)ltoPP43 FBtr0332246|FBtr0081317 19793609|19793484 19794265|19794524 2L - 19793737 19793831 3'utr fs(2)ltoPP43 FlyBase G11855.1 AGTGTACTATTTGGAATCGTTTTAGGCAAATGTCTCTCATTACCTTATGTTCATAGAATTAATTAGCTATTAGATTAGAATAATTTACCCCCACA 23 19793801 0.990687535 11 20 204 0.884615385 1.06069784 0.192307692 0.130434783 0.230769231 23 2 1 23 2L:19793737-19793831 6 fs(2)ltoPP43 FBtr0081317|FBtr0332246 19793484|19793609 19794524|19794265 CTTATG 6mer2-7 dme-miR-970-3p 2L - 19793775 19793813 3'utr fs(2)ltoPP43 FlyBase G9106.1 GTTTTAGGCAAATGTCTCTCATTACCTTATGTTCATAGA 12 19793792 0.674375356 3 11 96 0.933333333 1.146128036 0.133333333 0.166666667 0.333333333 12 1 0 14 2L:19793775-19793813 6 12.5 215 FBgn0004811 606.5633333 48.93333333 75.4 0.020607906 0.255449591 0.165782493 13 4 8.5 0.25 dme-bantam-3p 6mer3-8 TGATCT 2L 1984546 1984551 - 2L_1984546_1984551_- 0.840928354 0.544981962 0.692955158 0.209265706 Got2 FBtr0077867|FBtr0077868 1984510|1984510 1984705|1984705 2L - 1984520 1984617 3'utr Got2 FlyBase G6898.1 TGCGAAGTCTAGATAAGCCAATGCATTTTGCACACTCTCTATCCATATCTCTGTATATAAGCTAAATGATCTGCCTTTTAAAAAATAAAGCATTTAAA 290 1984551 0.780995854 17 275 2269 0.953168044 1.693978059 0.060606061 0.196551724 0.358126722 290 11 6 346 2L:1984520-1984617 6 Got2 FBtr0077867|FBtr0077868 1984510|1984510 1984705|1984705 TGATCT 6mer3-8 dme-bantam-3p 2L - 1984527 1984621 3'utr Got2 FlyBase G5386.1 AAATTGCGAAGTCTAGATAAGCCAATGCATTTTGCACACTCTCTATCCATATCTCTGTATATAAGCTAAATGATCTGCCTTTTAAAAAATAAAGC 163 1984551 0.796026987 18 155 1210 0.963709677 1.901276646 0.056451613 0.374233129 0.588709677 163 7 2 239 2L:1984527-1984621 6 207.5 216 FBgn0001125 531.6666667 41.34 63.08 0.390282132 5.019351717 3.289473684 0 0 0 0.25 dme-miR-8-3p 7mer-m8 CAGTATT 2L 20058264 20058270 - 2L_20058264_20058270_- 0.599250422 0.647819339 0.62353488 0.034343399 barr FBtr0081348|FBtr0343850|FBtr0081349 20058161|20058161|20058161 20058384|20058384|20058384 2L - 20058234 20058365 3'utr barr FlyBase G11864.2 AATTCATAGTTCTAGTTGCCCTTAAATGCTGTTACAATTTATTTTCACGGCTACTCCTTAATCTCTTACCTCTATTTTTAACTCCCAATTCGTATCAGTATTCTGAAACAGATATCCTCACCCCAGTCGAAT 86 20058271 0.74930785 14 80 686 0.940594059 1.977723605 0.00990099 0.151162791 0.277227723 86 6 0 95 2L:20058234-20058365 7 barr FBtr0081348|FBtr0343850|FBtr0081349 20058161|20058161|20058161 20058384|20058384|20058384 CAGTATT 7mer-m8 dme-miR-8-3p 2L - 20058240 20058288 3'utr barr FlyBase G9115.2 TTAACTCCCAATTCGTATCAGTATTCTGAAACAGATATCCTCACCCCAG 32 20058271 0.734508833 7 24 227 0.803921569 1.612783857 0.078431373 0.4375 0.647058824 32 10 0 41 2L:20058240-20058288 7 31 217 FBgn0014127 727.3466667 33.53666667 51.05 0.042620667 0.924361395 0.607247796 1 1 1 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 2L 20063986 20063991 + 2L_20063986_20063991_+ 0.998922804 0.994531864 0.996727334 0.003104835 lok FBtr0081330|FBtr0306234|FBtr0081328|FBtr0081329 20063974|20063184|20063974|20063974 20064378|20064378|20064381|20064381 2L + 20063966 20064021 stop_codon lok FlyBase G5497.1 GCGACGCTAGGTTTCGTTTCTGTGTTTCCATCGTTAATACGTGAGGGTCGAGGCGC 49 20063984 0.73622517 10 24 381 0.545454545 1.176091259 0.327272727 0.12244898 0.218181818 49 24 1 30 2L:20063966-20064021 6 lok FBtr0081328|FBtr0081329|FBtr0081330|FBtr0306234 20063974|20063974|20063974|20063184 20064381|20064381|20064378|20064378 TGTGTT 6mer3-8 dme-miR-317-3p 2L + 20063938 20064006 stop_codon lok FlyBase G4276.1 ACTTCCTTGAGCCACCCACCAAGCGATCGCGACGCTAGGTTTCGTTTCTGTGTTTCCATCGTTAATACG 24 20063983 0.997549566 5 9 143 0.342857143 1.079181246 0.285714286 0.416666667 0.6 24 23 0 12 2L:20063938-20064006 6 16.5 218 FBgn0019686 524.4266667 29.24666667 44.53333333 0.031462931 0.564166857 0.370508982 2 3 2.5 0.25 dme-miR-1006-3p 6mer3-8 CGAATT 2L 20093153 20093158 - 2L_20093153_20093158_- 0.999907301 0.999560614 0.999733958 0.000245154 Taf13 FBtr0081340 20093086 20093223 2L - 20093124 20093196 3'utr Taf13 FlyBase G11903.1 CCAGGTATAAGCCAAACCTAGCAGTTAGCTCCAAGATGCGAATTATTTTTAATGTCTTTAATACTCTAAGCTA 18 20093188 0.967328873 8 18 99 1 1.322219295 0.095238095 0.166666667 0.285714286 18 0 0 21 2L:20093124-20093196 6 Taf13 FBtr0081340 20093086 20093223 CGAATT 6mer3-8 dme-miR-1006-3p 2L - 20093139 20093195 3'utr Taf13 FlyBase G9139.1 CAGGTATAAGCCAAACCTAGCAGTTAGCTCCAAGATGCGAATTATTTTTAATGTCTT 7 20093169 0.987594947 5 6 45 0.777777778 0.84509804 0.222222222 0.285714286 0.444444444 7 2 0 7 2L:20093139-20093195 6 6.5 219 FBgn0032847 298 62.63 96.09 0.021812081 0.103784129 0.067644916 30 11 20.5 0.25 dme-bantam-3p 8mer-A1 TGATCTCA 2L 201860 201867 + 2L_201860_201867_+ 0.627083195 0.627083892 0.627083543 4.95E-07 spen FBtr0332336|FBtr0330653|FBtr0078123|FBtr0078121 201413|201413|201413|201413 203250|203250|203250|203397 2L + 201800 201890 3'utr spen FlyBase G618.3 TTATATAACTCTCCGTAATTAAAAACCTTAAAGAAAAAGCTTGCAAAGTATCGTTAAGTTTGATCTCAAGAAAGAATGTTTTATTTTTGCT 1179 201859 0.786842431 15 1148 9915 0.973856209 2.086036093 0.328976035 0.146734521 0.269426289 1179 26 10 1341 2L:201800-201890 8 spen FBtr0078123|FBtr0078121|FBtr0332336|FBtr0330653 201413|201413|201413|201413 203250|203397|203250|203250 TGATCTCA 8mer-A1 dme-bantam-3p 2L + 201788 201902 3'utr spen FlyBase G495.1 TGTCTAAATTAATTATATAACTCTCCGTAATTAAAAACCTTAAAGAAAAAGCTTGCAAAGTATCGTTAAGTTTGATCTCAAGAAAGAATGTTTTATTTTTGCTTATTTAAAAAGA 710 201859 0.986641201 16 680 5881 0.957364341 1.994756945 0.304263566 0.322535211 0.533914729 710 35 9 988 2L:201788-201902 8 935 220 FBgn0016977 7307.703333 43.43 66.34333333 0.127947175 21.52889708 14.09335276 1 1 1 0.25 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 20345095 20345102 + 2L_20345095_20345102_+ 0.57237826 0.566605449 0.569491854 0.004082057 spir FBtr0339234 20344661 20348386 2L + 20345071 20345114 3'utr spir FlyBase G5542.1 TGTATTTTTAACTTGACAAAAAATTACGCTTACAAACAAAATAA 84 20345094 0.833271381 4 81 387 0.98019802 1.995635195 0 0.166666667 0.306930693 84 2 0 99 2L:20345071-20345114 8 spir FBtr0339234 20344661 20348386 TACGCTTA 8mer-A1 dme-miR-965-3p 2L + 20345039 20345114 3'utr spir FlyBase G4304.1 TTTCTCGGCTGCCAATAATCGTATAAAAATAATGTATTTTTAACTTGACAAAAAATTACGCTTACAAACAAAATAA 57 20345094 0.946662175 4 56 242 1 1.908485019 0 0.263157895 0.481481481 57 0 0 81 2L:20345039-20345114 8 68.5 221 FBgn0003475 1306.356667 49.26 74.34 0.05243591 1.390580593 0.921442023 1 1 1 0.25 dme-miR-305-3p 6mer2-7 TGTGCC 2L 20346153 20346158 + 2L_20346153_20346158_+ 0.826429532 0.901051838 0.863740685 0.052765934 spir FBtr0339234 20344661 20348386 2L + 20346135 20346169 3'utr spir FlyBase G5543.1 AGCGTCGCGTCTGCTTCCTGTGCCTGCGCACTCGG 7 20346153 0.813906897 2 7 51 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 2L:20346135-20346169 6 spir FBtr0339234 20344661 20348386 TGTGCC 6mer2-7 dme-miR-305-3p 2L + 20346133 20346166 3'utr spir FlyBase G4305.1 AAAGCGTCGCGTCTGCTTCCTGTGCCTGCGCACT 5 20346153 0.708734623 2 5 35 1 0.84509804 0 0.4 0.571428571 5 0 0 7 2L:20346133-20346166 6 6 222 FBgn0003475 1306.356667 49.26 74.34 0.004592926 0.12180268 0.08071025 0 0 0 0.25 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 2L 20361281 20361288 + 2L_20361281_20361288_+ 0.53440496 0.514317887 0.524361424 0.014203725 RtGEF FBtr0302106 20360849 20361429 2L + 20361255 20361314 3'utr RtGEF FlyBase G5562.1 AAGATCAACAAACTCAACTCTGCAATTGGTGCTAAGCAGCGAACAAAGGAATCCAAAGTT 151 20361280 0.765162728 4 146 773 0.981707317 2.206825876 0.237804878 0.079470199 0.152439024 151 3 0 161 2L:20361255-20361314 8 RtGEF FBtr0302106 20360849 20361429 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 2L + 20361198 20361308 3'utr RtGEF FlyBase G4319.1 ATGTTTAAGAGAAAAGATTGATTTTTTGGTTGAACCATTGGCCACTGATTTCGTTTTAAGATCAACAAACTCAACTCTGCAATTGGTGCTAAGCAGCGAACAAAGGAATCC 109 20361280 0.963488341 8 107 556 0.967567568 2.252853031 0.210810811 0.495412844 0.702702703 109 6 0 179 2L:20361198-20361308 8 125.5 223 FBgn0015803 1414.776667 51.74333333 79.37666667 0.08870658 2.425433228 1.581069164 1 1 1 0.25 dme-miR-184-3p 6mer2-7 CCGTCC 2L 2043247 2043252 + 2L_2043247_2043252_+ 0.997042638 0.999769056 0.998405847 0.001927927 Su(dx) FBtr0339529|FBtr0077823|FBtr0077822|FBtr0077824|FBtr0334778 2043182|2043182|2043182|2043182|2043182 2043677|2044372|2044372|2044372|2043677 2L + 2043182 2043412 stop_codon Su(dx) FlyBase G1147.1 GAGTGGCAGTCGATTTGTGGTCGGTTTGTTGATTAATGTTTAATTCCAGTTAAGCGCCTGCTTTACCGTCCCCTCCCCCTTTCCATTTGACGACCACGTTGCGTTAAATAGTTACTGTTATTATTATTATTACATACGTATGTATTACTACTGTATACTGTAAACACGAAACACACACTTCTGTCTGTCTATTCCTATGTTCGCAACCGATATCACACGAGATATTTGTTA 522 2043245 0.978794256 37 507 3452 0.972580645 2.081347308 0.022580645 0.155172414 0.288709677 522 13 4 603 2L:2043182-2043412 6 Su(dx) FBtr0077824|FBtr0334778|FBtr0077823|FBtr0077822|FBtr0339529 2043182|2043182|2043182|2043182|2043182 2044372|2043677|2044372|2044372|2043677 CCGTCC 6mer2-7 dme-miR-184-3p 2L + 2043182 2043269 stop_codon Su(dx) FlyBase G903.2 GAGTGGCAGTCGATTTGTGGTCGGTTTGTTGATTAATGTTTAATTCCAGTTAAGCGCCTGCTTTACCGTCCCCTCCCCCTTTCCATTT 243 2043245 0.697044065 14 232 1494 0.943243243 1.940765436 0.008108108 0.386831276 0.597297297 243 18 3 349 2L:2043182-2043269 6 337.5 224 FBgn0003557 1814.713333 49.05333333 75.26666667 0.185979787 6.880266377 4.484056687 2 2 2 0.25 dme-miR-283-5p 8mer-m1 TGATATTT 2L 2043558 2043565 + 2L_2043558_2043565_+ 0.350349528 0.555464595 0.452907062 0.145038278 Su(dx) FBtr0339529|FBtr0077823|FBtr0077822|FBtr0077824|FBtr0334778 2043182|2043182|2043182|2043182|2043182 2043677|2044372|2044372|2044372|2043677 2L + 2043486 2043576 3'utr Su(dx) FlyBase G1148.1 TTAGGCATAATTTATCCACTGCATAACTCTCCTGTGTAAATTTAAGACAAAGTTTGATTGATTCGCTTCTGTTGATATTTCTTACGACCAT 50 2043552 0.729324422 15 47 489 0.926470588 1.799340549 0.132352941 0.28 0.470588235 50 5 0 63 2L:2043486-2043576 8 Su(dx) FBtr0077824|FBtr0334778|FBtr0077823|FBtr0077822|FBtr0339529 2043182|2043182|2043182|2043182|2043182 2044372|2043677|2044372|2044372|2043677 TGATATTT 8mer-m1 dme-miR-283-5p 2L + 2043488 2043568 3'utr Su(dx) FlyBase G904.1 AGGCATAATTTATCCACTGCATAACTCTCCTGTGTAAATTTAAGACAAAGTTTGATTGATTCGCTTCTGTTGATATTTCTT 28 2043552 0.98874498 14 28 259 1 1.643452676 0.068181818 0.428571429 0.636363636 28 0 0 44 2L:2043488-2043568 8 19 225 FBgn0003557 1814.713333 49.05333333 75.26666667 0.010469973 0.387333515 0.252435784 6 6 6 0.25 dme-miR-92b-3p 6mer2-7 TGCAAT 2L 2044324 2044329 + 2L_2044324_2044329_+ 0.644640212 0.619992182 0.632316197 0.017428768 Su(dx) FBtr0077823|FBtr0077822|FBtr0077824 2043182|2043182|2043182 2044372|2044372|2044372 2L + 2044298 2044382 3'utr Su(dx) FlyBase G1151.1 TATTAAATAGATTTTATTTAGTTTAATGCAATGTGTACTGTATTATATAAAATAAATGCAAAATTATTTAGTGATACACGGCCGA 23 2044331 0.976351797 11 20 237 0.928571429 1.414973348 0.285714286 0.217391304 0.357142857 23 2 0 26 2L:2044298-2044382 6 Su(dx) FBtr0077824|FBtr0077823|FBtr0077822 2043182|2043182|2043182 2044372|2044372|2044372 TGCAAT 6mer2-7 dme-miR-92b-3p 2L + 2044313 2044355 3'utr Su(dx) FlyBase G905.1 ATTTAGTTTAATGCAATGTGTACTGTATTATATAAAATAAATG 14 2044330 0.74261912 7 12 150 0.913043478 1.322219295 0.173913043 0.571428571 0.739130435 14 2 0 21 2L:2044313-2044355 6 15 226 FBgn0003557 1814.713333 49.05333333 75.26666667 0.008265768 0.305789617 0.199291408 -7 -6 -6.5 0.25 dme-miR-34-5p 7mer-A1 ACTGCCA 2L 20647246 20647252 + 2L_20647246_20647252_+ 0.738810562 0.718240897 0.728525729 0.014544974 CG2608 FBtr0081384 20646861 20647381 2L + 20647182 20647267 3'utr CG2608 FlyBase G5619.1 TGACAGCCTTGTATCGAGTGAGATTAGTTTTGTTGATTCAGATTAGTCACATGAAAGGTCTCTGACTGCCATGTAAATCATAAGTA 14 20647244 0.984343313 6 12 101 0.882352941 0.875061263 0.176470588 0.214285714 0.352941176 14 1 1 15 2L:20647182-20647267 7 CG2608 FBtr0081384 20646861 20647381 ACTGCCA 7mer-A1 dme-miR-34-5p 2L + 20647221 20647268 3'utr CG2608 FlyBase G4365.1 AGATTAGTCACATGAAAGGTCTCTGACTGCCATGTAAATCATAAGTAA 9 20647253 0.956937515 4 9 57 1 1.230448921 0.235294118 0.777777778 0.882352941 9 0 0 17 2L:20647221-20647268 7 9 227 FBgn0032870 618.86 51.52 79.05666667 0.014542869 0.174689441 0.113842392 2 -7 -2.5 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 2L 20730913 20730919 - 2L_20730913_20730919_- 0.505724069 0.507481555 0.506602812 0.00124274 CG9318 FBtr0081393|FBtr0335149 20730643|20730414 20730999|20730999 2L - 20730809 20730974 3'utr CG9318 FlyBase G12008.1 TGCGAATGTATTTTTGTATGTGTAGCCACAAATTTACACTTAAGCCTAATGTGTGTGTGATTTCTGCGCTGTGCGCCCGGCACAGACAGTTTTCTGTTTACTATAATTACGATTGATATGTGTATAATAACATATGTTTGTATCAGGCAAGGAACAGTGGAGTAAC 93 20730913 0.985962272 25 92 775 0.990740741 2.029383778 0.231481481 0.139784946 0.259259259 93 1 0 107 2L:20730809-20730974 7 CG9318 FBtr0081393|FBtr0335149 20730643|20730414 20730999|20730999 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 20730886 20730957 3'utr CG9318 FlyBase G9212.1 ATGTGTAGCCACAAATTTACACTTAAGCCTAATGTGTGTGTGATTTCTGCGCTGTGCGCCCGGCACAGACAG 67 20730913 0.987733209 12 65 588 0.962264151 2.008600172 0.160377358 0.432835821 0.641509434 67 4 0 102 2L:20730886-20730957 7 65 228 FBgn0032880 1856.426667 79.74 121.9 0.035013503 0.815149235 0.533223954 -6 -6 -6 0.25 dme-miR-995-5p 6mer3-8 AATTCG 2L 20739317 20739322 + 2L_20739317_20739322_+ 0.962312854 0.940641989 0.951477421 0.01532364 Fs(2)Ket FBtr0305586|FBtr0305585|FBtr0081392|FBtr0305584 20738901|20738901|20738901|20738901 20750941|20750941|20739764|20739764 2L + 20739230 20739343 3'utr Fs(2)Ket FlyBase G5669.1 AAGTTTGTCCGATCTATTGTTGCTGTGCAACTTCTAAATGCTAAGACCACTTGTTTATAAAACTCCCTACCCACTAGCTGTAAGTTCAATTCGATCCACTGTTTCGACTCAATA 21 20739319 0.990909227 14 18 182 0.88 0.865301426 0.08 0.142857143 0.28 21 1 2 22 2L:20739230-20739343 6 Fs(2)Ket FBtr0305584|FBtr0081392|FBtr0305585|FBtr0305586 20738901|20738901|20738901|20738901 20739764|20739764|20750941|20750941 AATTCG 6mer3-8 dme-miR-995-5p 2L + 20739290 20739361 3'utr Fs(2)Ket FlyBase G4400.1 AACTCCCTACCCACTAGCTGTAAGTTCAATTCGATCCACTGTTTCGACTCAATATTTTAATTAAGGTCTGTT 11 20739332 0.991514087 6 10 112 0.928571429 1.113943352 0.285714286 0.272727273 0.428571429 11 1 0 13 2L:20739290-20739361 6 9.5 229 FBgn0262743 4510.123333 82.11666667 125.5566667 0.002106373 0.11568906 0.075663047 -2 -15 -8.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 20740044 20740050 + 2L_20740044_20740050_+ 0.753178257 0.74952238 0.751350319 0.002585112 Fs(2)Ket FBtr0305586|FBtr0305586|FBtr0305586|FBtr0305585|FBtr0305585|FBtr0305585 20738901|20738901|20738901|20738901|20738901|20738901 20750941|20750941|20750941|20750941|20750941|20750941 2L + 20739947 20740111 5'utr-coding Fs(2)Ket FlyBase G5673.1 TATGTACGTGGTATTTTGATTGCGACAAACCCCCGAAATGTTTGGAAACGGATGAGGATTCCCCCTTTCTGTGGCGCGCGTGTGCATCGGCGTGTTGTGTGATATTATGGATTAAGCGTAAGAACTTTTCTAGTGAAACGAATGATTTTAGACCTAAGCAAAACC 244 20740042 0.777988656 33 226 1966 0.929078014 2.117271296 0.460992908 0.118852459 0.237588652 244 19 1 262 2L:20739947-20740111 7 Fs(2)Ket FBtr0305585|FBtr0305585|FBtr0305585|FBtr0305586|FBtr0305586|FBtr0305586 20738901|20738901|20738901|20738901|20738901|20738901 20750941|20750941|20750941|20750941|20750941|20750941 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 20739895 20740106 5'utr-coding Fs(2)Ket FlyBase G4403.2 TACCCCTATGCCAATAGTTATGCTGTGATGGATGCTTGAGAGGAACTATGTCTATGTACGTGGTATTTTGATTGCGACAAACCCCCGAAATGTTTGGAAACGGATGAGGATTCCCCCTTTCTGTGGCGCGCGTGTGCATCGGCGTGTTGTGTGATATTATGGATTAAGCGTAAGAACTTTTCTAGTGAAACGAATGATTTTAGACCTAAGCA 159 20740042 0.986032248 32 146 1331 0.927419355 1.759667845 0.584677419 0.408805031 0.620967742 159 15 3 230 2L:20739895-20740106 7 114.5 230 FBgn0262743 4510.123333 82.11666667 125.5566667 0.025387332 1.394357621 0.911938832 2 2 2 0.25 dme-miR-932-5p 6mer3-8 GGAATT 2L 20749193 20749198 + 2L_20749193_20749198_+ 0.5904634 0.591334999 0.5908992 0.000616314 Fs(2)Ket FBtr0305586 20738901 20750941 2L + 20749151 20749217 3'utr Fs(2)Ket FlyBase G5679.1 AAGGGAACATTTGTTTTATCAGATTCGAACATATCAGAAATTGGAATTTGAAATGGCAACTTGGAGC 6 20749196 0.974645763 5 6 42 1 0.903089987 0.625 0.166666667 0.375 6 0 0 8 2L:20749151-20749217 6 Fs(2)Ket FBtr0305586 20738901 20750941 GGAATT 6mer3-8 dme-miR-932-5p 2L + 20749160 20749224 3'utr Fs(2)Ket FlyBase G4410.1 TTTGTTTTATCAGATTCGAACATATCAGAAATTGGAATTTGAAATGGCAACTTGGAGCACTTGAT 5 20749192 0.988272988 4 4 41 0.8 0.903089987 0.5 0.8 0.9 5 2 0 8 2L:20749160-20749224 6 4 231 FBgn0262743 4510.123333 82.11666667 125.5566667 0.000886894 0.048711183 0.031858125 -3 1 -1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 20749805 20749810 + 2L_20749805_20749810_+ 0.882588733 0.999620943 0.941104838 0.082754262 Fs(2)Ket FBtr0305587|FBtr0305587|FBtr0305587|FBtr0305586|FBtr0305586|FBtr0305586|FBtr0305585|FBtr0305585|FBtr0305585 20738901|20738901|20738901|20738901|20738901|20738901|20738901|20738901|20738901 20750941|20750941|20750941|20750941|20750941|20750941|20750941|20750941|20750941 2L + 20749786 20749818 3'utr Fs(2)Ket FlyBase G5682.1 AAGAGTAGTGTGTTTGGAACTGTGACTGAGTAA 8 20749807 0.708485111 4 7 57 0.909090909 1 0 0.25 0.454545455 8 1 0 10 2L:20749786-20749818 6 Fs(2)Ket FBtr0305585|FBtr0305585|FBtr0305585|FBtr0305586|FBtr0305586|FBtr0305586|FBtr0305587|FBtr0305587|FBtr0305587 20738901|20738901|20738901|20738901|20738901|20738901|20738901|20738901|20738901 20750941|20750941|20750941|20750941|20750941|20750941|20750941|20750941|20750941 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 20749795 20749824 3'utr Fs(2)Ket FlyBase G4414.1 GTGTTTGGAACTGTGACTGAGTAAATTTGT 8 20749801 0.630032987 5 8 55 1 1 0 0.25 0.4 8 0 0 10 2L:20749795-20749824 6 8 232 FBgn0262743 4510.123333 82.11666667 125.5566667 0.001773787 0.097422367 0.06371625 -2 4 1 0.25 dme-miR-308-3p 8mer-m1 CTGTGATT 2L 20750127 20750134 + 2L_20750127_20750134_+ 0.369747952 0.375059071 0.372403511 0.003755515 Fs(2)Ket FBtr0305587|FBtr0305586|FBtr0305585 20738901|20738901|20738901 20750941|20750941|20750941 2L + 20750104 20750186 3'utr Fs(2)Ket FlyBase G5683.1 TAAAAACACAACTGTAACATTGCCTGTGATTCATTCGATCATCTGTGTGTGGAGTGTACGCTGTGTGAAAGACTTGTGTGGAT 58 20750124 0.98960313 8 51 500 0.848484848 1.271066772 0.03030303 0.120689655 0.227272727 58 8 2 56 2L:20750104-20750186 8 Fs(2)Ket FBtr0305585|FBtr0305586|FBtr0305587 20738901|20738901|20738901 20750941|20750941|20750941 CTGTGATT 8mer-m1 dme-miR-308-3p 2L + 20750108 20750145 3'utr Fs(2)Ket FlyBase G4416.1 AACACAACTGTAACATTGCCTGTGATTCATTCGATCAT 31 20750124 0.774842722 7 29 254 0.9375 1.653212514 0.0625 0.483870968 0.666666667 31 3 0 45 2L:20750108-20750145 8 43.5 233 FBgn0262743 4510.123333 82.11666667 125.5566667 0.009644969 0.529734118 0.346457111 3 3 3 0.25 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 2L 20788624 20788629 + 2L_20788624_20788629_+ 0.958157983 0.991353206 0.974755594 0.023472551 Pomp FBtr0081414 20788537 20789098 2L + 20788551 20788666 3'utr Pomp FlyBase G5710.1 GAAGTTGCTAAATGCCTGGCATTCAGCCTTTAAACTCTAAGACACTCTTAAGATCAGCAAATAAAATATATTTTGGTGCGACCAGCTAGAGGTAAACAAAATTCACCATTTCTTTG 42 20788623 0.706173228 19 39 254 0.886792453 1.070037867 0.113207547 0.238095238 0.396226415 42 3 3 47 2L:20788551-20788666 6 Pomp FBtr0081414 20788537 20789098 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 2L + 20788550 20788644 3'utr Pomp FlyBase G4437.1 TGAAGTTGCTAAATGCCTGGCATTCAGCCTTTAAACTCTAAGACACTCTTAAGATCAGCAAATAAAATATATTTTGGTGCGACCAGCTAGAGGTA 21 20788624 0.776688047 8 20 118 0.967741935 1.176091259 0.258064516 0.428571429 0.612903226 21 0 1 30 2L:20788550-20788644 6 13.5 234 FBgn0032884 886.4133333 100.35 153.2666667 0.015229915 0.134529148 0.088081775 1 0 0.5 0.25 dme-miR-31a-5p 6mer3-8 TCTTGC 2L 20813959 20813964 + 2L_20813959_20813964_+ 0.836826527 0.852675396 0.844750961 0.011206865 CG9328 FBtr0081416 20813711 20814331 2L + 20813656 20814022 stop_codon CG9328 FlyBase G5718.1 AATCCCGAGTATCTGAACGTGCGGGCCAAGCTGCGCACGGCGCACGCCAACAATTAAGGAGCAGCCCACTCGGATACCCCTCATCCTGTAATCCTCAGCCTATTTAATGTTTAGTTTTAGTAAGAGACCTAACCAAATTATGTGTAAGGAAACCATGTGTTTTATATGTTAACTTTGTGAGCGGTTTTCATTTTGATATTATGCAAAACTAGAGTTGATTATTATAATTAAAAATGTACACCTAGACTAAGCCATTTACTTGTTTAGTTTGTTAGTCCTTATCTCTAATCTAAGTTGAAGCTTTCTTGCGCTAAATTCGTTGTGTATAAACCAAGTGTATAAAGTTTTAGTTTCTAAAAGGACCCCA 257 20813961 0.987709092 60 244 2185 0.950331126 1.980760642 0.086092715 0.147859922 0.274834437 257 13 2 287 2L:20813656-20814022 6 CG9328 FBtr0081415|FBtr0081416 20813711|20813711 20814030|20814331 TCTTGC 6mer3-8 dme-miR-31a-5p 2L + 20813915 20813988 5'utr CG9328 FlyBase G4443.1 TTGTTTAGTTTGTTAGTCCTTATCTCTAATCTAAGTTGAAGCTTTCTTGCGCTAAATTCGTTGTGTATAAACCA 51 20813961 0.706274107 9 50 466 1 1.77815125 0.166666667 0.18 0.316666667 50 0 0 60 2L:20813915-20813988 6 56 235 FBgn0032886 2087.65 162.9466667 249.96 0.02682442 0.343670731 0.224035846 -2 -2 -2 0.25 dme-miR-932-5p 6mer2-7 GAATTG 2L 20871824 20871829 - 2L_20871824_20871829_- 0.846154592 0.81113774 0.828646166 0.024760687 sky FBtr0081443|FBtr0330257|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081447|FBtr0081444|FBtr0330256|FBtr0081441|FBtr0081442|FBtr0081446 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 2L - 20871789 20871845 3'utr sky FlyBase G12037.1 AAATTGTTTTCTATCTGAATTGTTCTCAATGTGTAGTTTATATACAATATCTTGATA 58 20871826 0.98340103 9 57 639 0.987179487 1.886490725 0.115384615 0.293103448 0.474358974 58 1 0 77 2L:20871789-20871845 6 sky FBtr0081442|FBtr0081447|FBtr0081446|FBtr0330256|FBtr0081444|FBtr0081441|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081443|FBtr0330257 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 GAATTG 6mer2-7 dme-miR-932-5p 2L - 20871786 20871840 3'utr sky FlyBase G9231.1 GTTTTCTATCTGAATTGTTCTCAATGTGTAGTTTATATACAATATCTTGATAAAT 34 20871826 0.990208216 6 34 344 1 1.755874856 0.105263158 0.411764706 0.649122807 34 0 0 57 2L:20871786-20871840 6 43 236 FBgn0032901 1773.08 43.72 66.94 0.024251585 0.983531565 0.642366298 -3 -3 -3 0.25 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 20872586 20872593 - 2L_20872586_20872593_- 0.629997005 0.630416727 0.630206866 0.000296773 sky FBtr0081443|FBtr0330257|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081447|FBtr0081444|FBtr0330256|FBtr0081441|FBtr0081442|FBtr0081446 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 2L - 20872530 20872667 3'utr sky FlyBase G12041.1 ATTTTCAATACCAACGAAATTCTTTGCTCACCTCCACCTAAAAACTGCACGTACACAAAATTTTTGCACACTTTTCTAGTCAATTTTTATGTTTTACAAAAATAACATGGTGTGTCTCCTCCCATTTCCCTCTGGACG 186 20872594 0.914851519 22 176 1855 0.948717949 1.86923172 0.11965812 0.188172043 0.354700855 186 10 2 222 2L:20872530-20872667 8 sky FBtr0081442|FBtr0081447|FBtr0081446|FBtr0330256|FBtr0081444|FBtr0081441|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081443|FBtr0330257 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 20872526 20872625 3'utr sky FlyBase G9235.1 AACTGCACGTACACAAAATTTTTGCACACTTTTCTAGTCAATTTTTATGTTTTACAAAAATAACATGGTGTGTCTCCTCCCATTTCCCTCTGGACGAACA 138 20872594 0.990473723 17 133 1362 0.974358974 2.278753601 0.082051282 0.297101449 0.502564103 138 5 0 190 2L:20872526-20872625 8 141.5 237 FBgn0032901 1773.08 43.72 66.94 0.079804634 3.236505032 2.113833284 1 1 1 0.25 dme-bantam-3p 8mer-A1 TGATCTCA 2L 20872779 20872786 - 2L_20872779_20872786_- 0.485738088 0.491136069 0.488437079 0.003816962 sky FBtr0081443|FBtr0330257|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081447|FBtr0081444|FBtr0330256|FBtr0081441|FBtr0081442|FBtr0081446 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 2L - 20872764 20872844 3'utr sky FlyBase G12043.1 AAATAAGTTGAAGGAACGATTGGGCAGTGGAGAGCTGCCATGTGCCACCATGTGCAATTGATCTCAAAACGAAAAACGAAA 1074 20872787 0.830645749 11 1049 5578 0.979405034 1.932473765 0.439359268 0.175977654 0.324942792 1074 13 14 1284 2L:20872764-20872844 8 sky FBtr0081442|FBtr0081447|FBtr0081446|FBtr0330256|FBtr0081444|FBtr0081441|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081443|FBtr0330257 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 TGATCTCA 8mer-A1 dme-bantam-3p 2L - 20872766 20872872 3'utr sky FlyBase G9236.1 GCGGAATTTGTAGTCGGTTCAAAGTCCAAAATAAGTTGAAGGAACGATTGGGCAGTGGAGAGCTGCCATGTGCCACCATGTGCAATTGATCTCAAAACGAAAAACGA 647 20872787 0.963957029 13 634 3280 0.97718254 2.090346244 0.446428571 0.404945904 0.618055556 647 16 7 985 2L:20872766-20872872 8 842 238 FBgn0032901 1773.08 43.72 66.94 0.47487987 19.2589204 12.57842844 1 1 1 0.25 dme-miR-995-5p 6mer3-8 AATTCG 2L 20873117 20873122 - 2L_20873117_20873122_- 0.632885318 0.803040579 0.717962948 0.120317966 sky FBtr0081443|FBtr0330257|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081445|FBtr0081447|FBtr0081444|FBtr0330256|FBtr0081441|FBtr0081442|FBtr0081446 20871333|20871333|20871333|20871333|20871333|20872993|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 2L - 20873090 20873159 3'utr sky FlyBase G12045.1 TTTTTCTTTCTGTAAACCAAATTTACTGACTTGACTGAATTCGTTATTAATGTTATTAATATTATTATTG 97 20873132 0.983889909 10 91 844 0.933333333 1.748188027 0.041666667 0.18556701 0.341666667 97 7 1 112 2L:20873090-20873159 6 sky FBtr0081442|FBtr0081447|FBtr0081446|FBtr0330256|FBtr0081444|FBtr0081441|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081445|FBtr0081443|FBtr0330257 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20872993|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 AATTCG 6mer3-8 dme-miR-995-5p 2L - 20873104 20873177 3'utr sky FlyBase G9237.1 TTAATTTATGAAACTGTATTTTTCTTTCTGTAAACCAAATTTACTGACTTGACTGAATTCGTTATTAATGTTAT 64 20873132 0.66544607 13 62 539 0.975 1.414973348 0.0125 0.21875 0.375 64 0 2 78 2L:20873104-20873177 6 73.5 239 FBgn0032901 1773.08 43.72 66.94 0.04145329 1.68115279 1.097998207 10 10 10 0.25 dme-miR-304-5p 7mer-A1 GAGATTA 2L 20919169 20919175 - 2L_20919169_20919175_- 0.536809201 0.531220716 0.534014959 0.003951666 Mtp FBtr0081439 20919092 20919238 2L - 20919125 20919222 3'utr Mtp FlyBase G12065.1 TATTGGAGATTCCTTGCATAAAAACTATATTTCTATGTGAAAACTCAGAGATTAAGACTCGATATAGTTGTAAACTTAAACGAACAAAGACCATTTAA 50 20919171 0.982220912 9 46 337 0.93220339 1.439332694 0.271186441 0.18 0.305084746 50 3 1 55 2L:20919125-20919222 7 Mtp FBtr0081439 20919092 20919238 GAGATTA 7mer-A1 dme-miR-304-5p 2L - 20919131 20919198 3'utr Mtp FlyBase G9252.1 CTATATTTCTATGTGAAAACTCAGAGATTAAGACTCGATATAGTTGTAAACTTAAACGAACAAAGACC 22 20919171 0.977658197 5 21 141 0.965517241 1.447158031 0.413793103 0.272727273 0.448275862 22 1 0 28 2L:20919131-20919198 7 32.5 240 FBgn0266369 334.6733333 13.78 21.06333333 0.097109619 2.358490566 1.542965659 -4 -4 -4 0.25 dme-miR-14-3p 6mer2-7 AGACTG 2L 20965825 20965830 - 2L_20965825_20965830_- 0.906130169 0.993275975 0.949703072 0.061621386 CG42238 FBtr0290305|FBtr0331200|FBtr0331199|FBtr0290306 20965518|20965518|20965518|20965518 20967385|20967385|20967385|20967385 2L - 20965803 20965843 3'utr CG42238 FlyBase G12080.1 TCAAATCGCCTATAGACTGTAGCACTATAGCTAAAAGGTAT 10 20965832 0.955877721 2 10 51 1 1.113943352 0 0.3 0.461538462 10 0 0 13 2L:20965803-20965843 6 CG42238 FBtr0290306|FBtr0331199|FBtr0331200|FBtr0290305 20965518|20965518|20965518|20965518 20967385|20967385|20967385|20967385 AGACTG 6mer2-7 dme-miR-14-3p 2L - 20965811 20965848 3'utr CG42238 FlyBase G9258.1 AAACGTCAAATCGCCTATAGACTGTAGCACTATAGCTA 5 20965831 0.956116811 3 5 26 1 0.84509804 0 0.2 0.428571429 5 0 0 7 2L:20965811-20965848 6 7.5 241 FBgn0250867 324.93 11.38 17.49333333 0.023081895 0.659050967 0.428734756 2 1 1.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 210427 210432 + 2L_210427_210432_+ 0.997548771 0.999971934 0.998760353 0.00171339 Tbc1d15-17 FBtr0332339|FBtr0332339|FBtr0332339|FBtr0332338|FBtr0332338|FBtr0332338|FBtr0078125|FBtr0078125|FBtr0078125 209857|209857|209857|209857|209857|209857|209857|209857|209857 210725|210725|210725|210506|210506|210506|210506|210506|210506 2L + 210410 210448 3'utr Tbc1d15-17 FlyBase G643.1 TTAAGTTTAGTCAATTACTGTGAATATACATCCGTATAC 16 210434 0.732856639 4 12 143 0.705882353 1.079181246 0.058823529 0.0625 0.117647059 16 5 0 12 2L:210410-210448 6 Tbc1d15-17 FBtr0332338|FBtr0332338|FBtr0332338|FBtr0332339|FBtr0332339|FBtr0332339|FBtr0078125|FBtr0078125|FBtr0078125 209857|209857|209857|209857|209857|209857|209857|209857|209857 210506|210506|210506|210725|210725|210725|210506|210506|210506 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 210412 210448 3'utr Tbc1d15-17 FlyBase G517.1 AAGTTTAGTCAATTACTGTGAATATACATCCGTATAC 12 210425 0.676549666 5 11 100 0.9375 1.176091259 0 0.25 0.4375 12 1 0 15 2L:210412-210448 6 14 242 FBgn0031233 273.62 11.06666667 17.00333333 0.05116585 1.265060241 0.823367967 -7 2 -2.5 0.25 dme-miR-34-5p 7mer-A1 ACTGCCA 2L 210572 210578 + 2L_210572_210578_+ 0.812815871 0.796292841 0.804554356 0.011683596 Tbc1d15-17 FBtr0332339 209857 210725 2L + 210555 210593 3'utr Tbc1d15-17 FlyBase G645.1 AATCCATCAAGAACTTGACTGCCATTTGTATTCGGGTGG 5 210569 0.960334428 2 5 35 1 0.77815125 0.666666667 0.2 0.333333333 5 0 0 6 2L:210555-210593 7 Tbc1d15-17 FBtr0332339 209857 210725 ACTGCCA 7mer-A1 dme-miR-34-5p 2L + 210559 210593 3'utr Tbc1d15-17 FlyBase G518.1 CATCAAGAACTTGACTGCCATTTGTATTCGGGTGG 5 210580 0.930714971 2 3 32 0.571428571 0.602059991 0.571428571 0.4 0.571428571 5 3 0 4 2L:210559-210593 7 4.5 243 FBgn0031233 273.62 11.06666667 17.00333333 0.016446166 0.406626506 0.264653989 3 -8 -2.5 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 2L 21103985 21103991 + 2L_21103985_21103991_+ 0.474461 0.513390461 0.49392573 0.027527313 CG9257 FBtr0081465 21103925 21104321 2L + 21103851 21104023 stop_codon CG9257 FlyBase G5736.2 CTCATCGATCTTGCTACCAGTTTTCATCGCCATCGGGGCCTTTATACCACTGCTGTTCTGCCTCTGCAAGCTGTGATCCCCATCCGTTGCTCACTCAACGCTTTCGCCTGCGTTGGTTTCCTGCTTTGTGATTTTGTGATTTTGATAAAAGACTTAATTATATACTTATCGTT 218 21103991 0.988755642 36 196 2355 0.904411765 1.545837067 0.25 0.178899083 0.341911765 218 20 6 246 2L:21103851-21104023 7 CG9257 FBtr0081465 21103925 21104321 TGTGATT 7mer-m1 dme-miR-308-3p 2L + 21103884 21104029 stop_codon CG9257 FlyBase G4458.1 CGGGGCCTTTATACCACTGCTGTTCTGCCTCTGCAAGCTGTGATCCCCATCCGTTGCTCACTCAACGCTTTCGCCTGCGTTGGTTTCCTGCTTTGTGATTTTGTGATTTTGATAAAAGACTTAATTATATACTTATCGTTTAGTTC 167 21103983 0.879128559 31 159 1852 0.952380952 1.77815125 0.186507937 0.329341317 0.555555556 167 9 3 240 2L:21103884-21104029 7 143 244 FBgn0032916 272.05 21.3 32.82666667 0.525638669 6.713615023 4.35621446 -6 2 -2 0.25 dme-miR-34-5p 7mer-A1 ACTGCCA 2L 21136321 21136327 - 2L_21136321_21136327_- 0.816965006 0.816613994 0.8167895 0.000248194 Dap160 FBtr0333087|FBtr0333086 21135274|21135274 21137095|21137095 2L - 21136307 21136359 3'utr Dap160 FlyBase G12107.1 TGATTTATTGACTAAGTTAAGCGCTTATCTGAACTGCCATAACTGTATTAATT 49 21136330 0.795762379 7 47 358 0.962962963 1.238882089 0.111111111 0.040816327 0.12962963 49 0 2 52 2L:21136307-21136359 7 Dap160 FBtr0333086|FBtr0333087 21135274|21135274 21137095|21137095 ACTGCCA 7mer-A1 dme-miR-34-5p 2L - 21136306 21136352 3'utr Dap160 FlyBase G9277.1 TTGACTAAGTTAAGCGCTTATCTGAACTGCCATAACTGTATTAATTT 43 21136330 0.787847382 6 41 323 1 1.763427994 0.275862069 0.302325581 0.482758621 43 0 0 58 2L:21136306-21136352 7 44 245 FBgn0023388 1725.443333 51.01 78.44666667 0.025500693 0.862575965 0.560890626 3 3 3 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 2L 21137286 21137292 - 2L_21137286_21137292_- 0.518731193 0.519557371 0.519144282 0.000584212 Dap160 FBtr0081504|FBtr0081503|FBtr0301276 21137129|21137129|21137129 21137476|21137476|21137476 2L - 21137180 21137376 5'utr Dap160 FlyBase G12110.1 AAGTTCTCGCCTATTCTCGCTATTGAAACCCCCACTTTAGTGTTTATTTGTTGCAATATTTCCAAGATGTATCTAATTGTTAATTGTGATTATTTAGTTTTTAGATTTACTCCTAAGCTTATCACTAGCGACCTCTCTATTTTCGCTTAGCTAATTTCTAGTGTTATTTCATTTATGTATTTATTTAGTCGGCATAA 81 21137293 0.995423466 30 71 1049 0.87628866 1.62838893 0.164948454 0.172839506 0.309278351 81 11 1 85 2L:21137180-21137376 7 Dap160 FBtr0301276|FBtr0081503|FBtr0081504 21137129|21137129|21137129 21137476|21137476|21137476 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 21137212 21137320 5'utr Dap160 FlyBase G9278.1 TATTTCCAAGATGTATCTAATTGTTAATTGTGATTATTTAGTTTTTAGATTTACTCCTAAGCTTATCACTAGCGACCTCTCTATTTTCGCTTAGCTAATTTCTAGTGTT 58 21137293 0.995472367 22 53 786 0.928571429 1.414973348 0.130952381 0.362068966 0.55952381 58 4 2 78 2L:21137212-21137320 7 45 246 FBgn0023388 1725.443333 51.01 78.44666667 0.026080254 0.882179965 0.573638141 1 1 1 0.25 dme-miR-276a-3p 7mer-A1 GTTCCTA 2L 21145189 21145195 - 2L_21145189_21145195_- 0.764520327 0.768397176 0.766458751 0.002741382 del FBtr0333085|FBtr0333084|FBtr0081502 21145135|21145135|21145135 21145298|21145298|21145298 2L - 21145177 21145216 3'utr del FlyBase G12127.1 AAATTAAGTTATCAAATTATTGTTCCTATTTGATTATTAC 47 21145197 0.729575614 9 46 557 0.963636364 1.72427587 0.036363636 0.170212766 0.290909091 47 2 0 53 2L:21145177-21145216 7 del FBtr0333084|FBtr0081502|FBtr0333085 21145135|21145135|21145135 21145298|21145298|21145298 GTTCCTA 7mer-A1 dme-miR-276a-3p 2L - 21145176 21145263 3'utr del FlyBase G9290.1 CTTGACATATATCATAATCTCTTCATTATTGATGCACATAATTGAATAAATTAAGTTATCAAATTATTGTTCCTATTTGATTATTACA 38 21145197 0.910733043 13 38 443 1 1.770852012 0.203389831 0.368421053 0.593220339 38 0 0 59 2L:21145176-21145263 7 39 247 FBgn0086251 92 3.553333333 5.473333333 0.423913043 10.97560976 7.12545676 2 2 2 0.25 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 21160797 21160802 - 2L_21160797_21160802_- 0.570292844 0.784778747 0.677535796 0.151664434 Nbr FBtr0081499 21160634 21161011 2L - 21160764 21160816 3'utr Nbr FlyBase G12152.1 ATCAGAAGGAAACTATGTGACTGCGAGCAGGATATGAAAGAATGAATTTTATT 55 21160801 0.715927094 7 55 225 1 1.785329835 0.213114754 0.109090909 0.196721311 55 0 0 61 2L:21160764-21160816 6 Nbr FBtr0081499 21160634 21161011 ATGTGA 6mer3-8 dme-miR-1003-3p 2L - 21160721 21160825 3'utr Nbr FlyBase G9309.1 ATGTTACAAATCAGAAGGAAACTATGTGACTGCGAGCAGGATATGAAAGAATGAATTTTATTACGTTATGATTTCAAGCTCACTGTATCTCCATACTTTAAATAC 76 21160800 0.756674088 11 74 396 0.975409836 1.774516966 0.172131148 0.434210526 0.647540984 76 2 1 119 2L:21160721-21160825 6 45.5 248 FBgn0032924 175.9366667 9.03 13.69333333 0.25861579 5.03875969 3.32278481 -1 -2 -1.5 0.25 dme-miR-7-5p 6mer2-7 TCTTCC 2L 21172700 21172705 + 2L_21172700_21172705_+ 0.887924663 0.986424264 0.937174463 0.069649735 Acon FBtr0300425|FBtr0346587|FBtr0343871 21172647|21172647|21172647 21173017|21173184|21173185 2L + 21172631 21172761 stop_codon Acon FlyBase G5785.1 AAGGAGCTGGCCCAGTAAATGGTCCTGGACCTACTTAAGACACCCAGTCAAGAAGCCTGATCCCAACCTTCTTCCTGTAGGTGAACACACTCAAATTCACAACGGAAGCAATCGAATTATGGTATTGTTAT 21 21172701 0.967201718 14 19 103 0.964285714 1.431363764 0.071428571 0.285714286 0.464285714 21 1 0 27 2L:21172631-21172761 6 Acon FBtr0081473|FBtr0346587|FBtr0343871|FBtr0300425 21172647|21172647|21172647|21172647 21172895|21173184|21173185|21173017 TCTTCC 6mer2-7 dme-miR-7-5p 2L + 21172668 21172740 3'utr Acon FlyBase G4492.2 AGACACCCAGTCAAGAAGCCTGATCCCAACCTTCTTCCTGTAGGTGAACACACTCAAATTCACAACGGAAGCA 16 21172711 0.965395777 7 11 58 0.681818182 1.176091259 0.136363636 0.375 0.545454545 16 7 0 15 2L:21172668-21172740 6 7 249 FBgn0010100 1510.516667 65.87 100.8933333 0.004634176 0.106269926 0.069380204 -1 -11 -6 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 2L 21231227 21231232 + 2L_21231227_21231232_+ 0.493516534 0.842318668 0.667917601 0.246640401 CG8677 FBtr0346586|FBtr0331677 21231107|21231107 21232059|21231692 2L + 21231172 21231232 3'utr CG8677 FlyBase G5818.1 AATTTTACTTTAGGGCTAGAAATCAATCTTGGCAATACTTTACCAATATAAGCTTTGTGTT 10 21231200 0.894799332 5 10 79 1 1.041392685 0 0.1 0.181818182 10 0 0 11 2L:21231172-21231232 6 CG8677 FBtr0346586|FBtr0331677 21231107|21231107 21232059|21231692 TGTGTT 6mer3-8 dme-miR-317-3p 2L + 21231176 21231238 3'utr CG8677 FlyBase G4520.1 TTACTTTAGGGCTAGAAATCAATCTTGGCAATACTTTACCAATATAAGCTTTGTGTTTAAACT 5 21231223 0.991523085 5 5 51 1 0.84509804 0 0.4 0.571428571 5 0 0 7 2L:21231176-21231238 6 3 250 FBgn0026577 1892.863333 25.80333333 39.86666667 0.0015849 0.116264049 0.075250836 27 4 15.5 0.25 dme-miR-305-3p 6mer3-8 ATGTGC 2L 21231411 21231416 + 2L_21231411_21231416_+ 0.917304258 0.915452752 0.916378505 0.001309208 CG8677 FBtr0346586|FBtr0331677 21231107|21231107 21232059|21231692 2L + 21231401 21231488 3'utr CG8677 FlyBase G5819.2 AGTTCCCTTTATGTGCTGTTACAGTTTAGCTAAATCAAGCATCAACTACTTTTAGTATTTTAATTTAGCTCTATATGATTTGAGCCCT 14 21231412 0.879832397 7 13 137 0.944444444 1.230448921 0.166666667 0.142857143 0.333333333 14 1 0 17 2L:21231401-21231488 6 CG8677 FBtr0346586|FBtr0331677 21231107|21231107 21232059|21231692 ATGTGC 6mer3-8 dme-miR-305-3p 2L + 21231392 21231486 3'utr CG8677 FlyBase G4522.1 ATTTAACTTAGTTCCCTTTATGTGCTGTTACAGTTTAGCTAAATCAAGCATCAACTACTTTTAGTATTTTAATTTAGCTCTATATGATTTGAGCC 16 21231412 0.909646223 7 15 159 0.958333333 1.361727836 0 0.375 0.583333333 16 1 0 23 2L:21231392-21231486 6 5 251 FBgn0026577 1892.863333 25.80333333 39.86666667 0.002641501 0.193773414 0.12541806 -1 -1 -1 0.25 dme-miR-8-3p 6mer2-7 AGTATT 2L 21231454 21231459 + 2L_21231454_21231459_+ 0.997465834 0.880331406 0.93889862 0.082826529 CG8677 FBtr0346586|FBtr0331677 21231107|21231107 21232059|21231692 2L + 21231401 21231488 3'utr CG8677 FlyBase G5819.2 AGTTCCCTTTATGTGCTGTTACAGTTTAGCTAAATCAAGCATCAACTACTTTTAGTATTTTAATTTAGCTCTATATGATTTGAGCCCT 14 21231452 0.879832397 7 13 137 0.944444444 1.230448921 0.166666667 0.142857143 0.333333333 14 1 0 17 2L:21231401-21231488 6 CG8677 FBtr0346586|FBtr0331677 21231107|21231107 21232059|21231692 AGTATT 6mer2-7 dme-miR-8-3p 2L + 21231392 21231486 3'utr CG8677 FlyBase G4522.1 ATTTAACTTAGTTCCCTTTATGTGCTGTTACAGTTTAGCTAAATCAAGCATCAACTACTTTTAGTATTTTAATTTAGCTCTATATGATTTGAGCC 16 21231452 0.909646223 7 15 159 0.958333333 1.361727836 0 0.375 0.583333333 16 1 0 23 2L:21231392-21231486 6 6.5 252 FBgn0026577 1892.863333 25.80333333 39.86666667 0.003433951 0.251905439 0.163043478 2 2 2 0.25 dme-miR-305-3p 7mer-m8 ATGTGCC 2L 21257941 21257947 + 2L_21257941_21257947_+ 0.63326686 0.51140609 0.572336475 0.086168598 Hr39 FBtr0081479|FBtr0081481 21257828|21257828 21259675|21259675 2L + 21257904 21257984 3'utr Hr39 FlyBase G5836.2 TTCTATAGATAAGATCCTTACTGTAAGTTCTGAAAACATGTGCCTAAAAACCAAAGCCACGATAGCAGTCACATCAGGCCC 21 21257942 0.906102357 8 19 101 0.913043478 1.322219295 0 0.095238095 0.173913043 21 2 0 21 2L:21257904-21257984 7 Hr39 FBtr0081480|FBtr0081481|FBtr0081479 21257828|21257828|21257828 21258196|21259675|21259675 ATGTGCC 7mer-m8 dme-miR-305-3p 2L + 21257914 21257972 3'utr Hr39 FlyBase G4533.1 AAGATCCTTACTGTAAGTTCTGAAAACATGTGCCTAAAAACCAAAGCCACGATAGCAGT 8 21257942 0.938136675 3 8 36 1 1.041392685 0 0.375 0.545454545 8 0 0 11 2L:21257914-21257972 7 10 253 FBgn0261239 651.04 19.10333333 29.40333333 0.015360039 0.523468854 0.340097495 -1 -1 -1 0.25 dme-miR-33-5p 8mer-A1 CAATGCAA 2L 21259641 21259648 + 2L_21259641_21259648_+ 0.48034216 0.524320633 0.502331397 0.031097425 Hr39 FBtr0081479|FBtr0081481 21257828|21257828 21259675|21259675 2L + 21259575 21259663 3'utr Hr39 FlyBase G5842.1 AAAACTCAATTTTGCTTTTAAATAAATTTAATAAGTAAAATTCAACAATAATTGATATACAATTGTCAATGCAATATTTTGTAATAAAA 13 21259640 0.991411029 3 13 135 1 1.146128036 0.142857143 0.076923077 0.142857143 13 0 0 14 2L:21259575-21259663 8 Hr39 FBtr0081481|FBtr0081479 21257828|21257828 21259675|21259675 CAATGCAA 8mer-A1 dme-miR-33-5p 2L + 21259624 21259664 3'utr Hr39 FlyBase G4537.1 AATTGATATACAATTGTCAATGCAATATTTTGTAATAAAAA 10 21259640 0.821326769 2 10 88 1 1.113943352 0 0.3 0.461538462 10 0 0 13 2L:21259624-21259664 8 10 254 FBgn0261239 651.04 19.10333333 29.40333333 0.015360039 0.523468854 0.340097495 1 1 1 0.25 dme-miR-7-5p 7mer-A1 TCTTCCA 2L 21319125 21319131 + 2L_21319125_21319131_+ 0.798369419 0.761626932 0.779998175 0.025980871 crc FBtr0081512|FBtr0332001|FBtr0081513|FBtr0332002 21319056|21319056|21319056|21319056 21319527|21319527|21319527|21319527 2L + 21319086 21319133 3'utr crc FlyBase G5894.1 CGTCGTTTGCAAAGTTATTGTTATAGTTAAACCCAAGCCTCTTCCATA 7 21319103 0.930633238 4 6 58 0.888888889 0.602059991 0.222222222 0.285714286 0.444444444 7 0 1 8 2L:21319086-21319133 7 crc FBtr0081513|FBtr0332002|FBtr0081512|FBtr0332001 21319056|21319056|21319056|21319056 21319527|21319527|21319527|21319527 TCTTCCA 7mer-A1 dme-miR-7-5p 2L + 21319004 21319135 stop_codon crc FlyBase G4578.1 ATGCGCTATCTGCGCCAGCTGATTCGAGAGTTCTACCATGAACGCAAGCGCTAGGCTTTATTTTCTTTGAAATCAATTTTATCGTCGTTTGCAAAGTTATTGTTATAGTTAAACCCAAGCCTCTTCCATAAA 27 21319103 0.877541477 19 24 227 0.771428571 1.431363764 0.057142857 0.148148148 0.342857143 27 8 0 27 2L:21319004-21319135 7 3 255 FBgn0000370 8504.88 510.09 782.7766667 0.000352739 0.005881315 0.003832511 22 22 22 0.25 dme-miR-318-3p 6mer2-7 CCAGTG 2L 21319285 21319290 + 2L_21319285_21319290_+ 0.882726374 0.889162438 0.885944406 0.004550939 crc FBtr0081512|FBtr0332001|FBtr0081513|FBtr0332002 21319056|21319056|21319056|21319056 21319527|21319527|21319527|21319527 2L + 21319146 21319340 3'utr crc FlyBase G5895.1 TCATAATGTTTCAATGTAATACTATCAATAACAATCTCCGGGTTGCCCAAAATCTACAAATCACCAAAGTACGCAGCCTGTCCTTTGTCCTACATTTTTGGCACTAATGACGAGTCTCTGAATTCGGAAATATTTGTTGCCAGTGGGGCCTAAAGGCGACCCCATATCCCAAGCAGCACGGTCCAATGTAAAAAC 62 21319280 0.97814563 23 57 379 0.927536232 1.505149978 0.202898551 0.112903226 0.202898551 62 4 1 64 2L:21319146-21319340 6 crc FBtr0081513|FBtr0332002|FBtr0081512|FBtr0332001 21319056|21319056|21319056|21319056 21319527|21319527|21319527|21319527 CCAGTG 6mer2-7 dme-miR-318-3p 2L + 21319242 21319337 3'utr crc FlyBase G4580.1 TTTGGCACTAATGACGAGTCTCTGAATTCGGAAATATTTGTTGCCAGTGGGGCCTAAAGGCGACCCCATATCCCAAGCAGCACGGTCCAATGTAAA 24 21319279 0.901642514 10 22 140 0.875 1.544068044 0.175 0.416666667 0.65 24 5 0 35 2L:21319242-21319337 6 15 256 FBgn0000370 8504.88 510.09 782.7766667 0.001763693 0.029406575 0.019162554 5 6 5.5 0.25 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2L 21356913 21356918 + 2L_21356913_21356918_+ 0.731086835 0.499737145 0.61541199 0.163588942 Tsp39D FBtr0273404 21356804 21358271 2L + 21356898 21356965 3'utr Tsp39D FlyBase G5903.1 TATTTTACATGCCCATTGAAGGCTGATTATCTTATTTATAACTAGATATATTATATTAATTTAATTTA 68 21356914 0.811831203 14 63 602 0.933333333 1.367976785 0.026666667 0.102941176 0.186666667 68 3 2 70 2L:21356898-21356965 6 Tsp39D FBtr0273404 21356804 21358271 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2L + 21356856 21356940 3'utr Tsp39D FlyBase G4584.1 GCTTCACAAGAACTATTACAAAAATGAAATCACAAAATATTCTATTTTACATGCCCATTGAAGGCTGATTATCTTATTTATAACT 50 21356914 0.979807676 7 43 410 0.861111111 1.315270435 0.027777778 0.36 0.555555556 50 8 2 62 2L:21356856-21356940 6 52.5 257 FBgn0032943 321.6666667 16.54333333 25.32333333 0.163212435 3.17348378 2.073186784 -1 -1 -1 0.25 dme-miR-14-3p 7mer-A1 AGACTGA 2L 21357475 21357481 + 2L_21357475_21357481_+ 0.788033375 0.782843628 0.785438502 0.003669743 Tsp39D FBtr0273404 21356804 21358271 2L + 21357452 21357489 3'utr Tsp39D FlyBase G5907.1 TTAAAACATTTCTTTAGAATTCGAGACTGAATGACATA 12 21357471 0.788036854 4 11 79 0.9375 1.176091259 0.3125 0.25 0.4375 12 1 0 15 2L:21357452-21357489 7 Tsp39D FBtr0273404 21356804 21358271 AGACTGA 7mer-A1 dme-miR-14-3p 2L + 21357462 21357487 3'utr Tsp39D FlyBase G4588.1 TCTTTAGAATTCGAGACTGAATGACA 5 21357465 0.634183922 3 4 30 1 1.079181246 0.333333333 0.6 0.833333333 5 0 0 12 2L:21357462-21357487 7 8.5 258 FBgn0032943 321.6666667 16.54333333 25.32333333 0.02642487 0.513802136 0.335658813 4 10 7 0.25 dme-miR-282-5p 6mer2-7 GAGGCT 2L 21358089 21358094 + 2L_21358089_21358094_+ 0.969120441 0.664292983 0.816706712 0.215545522 Tsp39D FBtr0273404 21356804 21358271 2L + 21358030 21358108 3'utr Tsp39D FlyBase G5912.1 ATATACCTAAATATATCGAATTTACAATTTTCATATCGACTTATATGTAGATTAACTTCGAGGCTTTACAATAAAACAA 43 21358095 0.985229093 6 41 339 0.960784314 1.389166084 0.019607843 0.11627907 0.254901961 43 1 1 49 2L:21358030-21358108 6 Tsp39D FBtr0273404 21356804 21358271 GAGGCT 6mer2-7 dme-miR-282-5p 2L + 21358066 21358106 3'utr Tsp39D FlyBase G4590.1 CGACTTATATGTAGATTAACTTCGAGGCTTTACAATAAAAC 28 21358095 0.781068908 4 27 222 0.97826087 1.653212514 0 0.392857143 0.630434783 28 1 0 45 2L:21358066-21358106 6 35 259 FBgn0032943 321.6666667 16.54333333 25.32333333 0.10880829 2.115655853 1.382124523 -6 -6 -6 0.25 dme-miR-7-5p 7mer-A1 TCTTCCA 2L 2156563 2156569 - 2L_2156563_2156569_- 0.821870949 0.820075885 0.820973417 0.001269257 aop FBtr0077850|FBtr0330658|FBtr0077851 2156482|2156482|2156482 2158164|2158164|2158164 2L - 2156518 2156786 3'utr aop FlyBase G6954.1 TTGAAGCACTTTATTAATTACATTAAACGGAATGAACAGAGTTAGGAGAAGATATCATCGCTGCACGTTCATACAATTAGCCTGTAGTGCAACTGTAATTATTAATTATTGTGTAGATCTACGCTAAAGTTAATTTTCTATTTGTTTTTCGTACGCCTTAAGTTTAAACACCGCCAATAGCTAATAATTAGCACTCTAGTGTCGCCACAATACCTGTTCTTCCATTGAAAACGTTATCTTTCGATCAATACATAATTTATATATGTATA 166 2156570 0.986510365 32 163 1204 0.984615385 1.982271233 0.179487179 0.138554217 0.266666667 166 2 1 192 2L:2156518-2156786 7 aop FBtr0077851|FBtr0330658|FBtr0077850 2156482|2156482|2156482 2158164|2158164|2158164 TCTTCCA 7mer-A1 dme-miR-7-5p 2L - 2156529 2156643 3'utr aop FlyBase G5437.1 GTTTTTCGTACGCCTTAAGTTTAAACACCGCCAATAGCTAATAATTAGCACTCTAGTGTCGCCACAATACCTGTTCTTCCATTGAAAACGTTATCTTTCGATCAATACATAATTT 76 2156570 0.776862656 17 76 540 1 2.033423755 0.12037037 0.368421053 0.555555556 76 0 0 108 2L:2156529-2156643 7 91 260 FBgn0000097 634.18 16.10666667 24.79666667 0.143492384 5.649834437 3.669848098 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 2157269 2157275 - 2L_2157269_2157275_- 0.800520397 0.798113623 0.79931701 0.001701865 aop FBtr0077850|FBtr0077850|FBtr0077850|FBtr0330658|FBtr0330658|FBtr0330658|FBtr0330659|FBtr0330659|FBtr0330659|FBtr0077851|FBtr0077851|FBtr0077851 2156482|2156482|2156482|2156482|2156482|2156482|2156790|2156790|2156790|2156482|2156482|2156482 2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164 2L - 2157214 2157287 5'utr aop FlyBase G6956.1 AAATTGATTTCGTGTGATAACAACAGAATTATCTTTGATTCACATTGGCTGAATGCTAACGAAACCAGAGCAGT 12 2157282 0.977306607 11 12 78 1 1.255272505 0.055555556 0.333333333 0.555555556 12 0 0 18 2L:2157214-2157287 7 aop FBtr0330659|FBtr0330659|FBtr0330659|FBtr0077851|FBtr0077851|FBtr0077851|FBtr0330658|FBtr0330658|FBtr0330658|FBtr0077850|FBtr0077850|FBtr0077850 2156790|2156790|2156790|2156482|2156482|2156482|2156482|2156482|2156482|2156482|2156482|2156482 2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 2157222 2157288 5'utr aop FlyBase G5442.1 CAAATTGATTTCGTGTGATAACAACAGAATTATCTTTGATTCACATTGGCTGAATGCTAACGAAACC 14 2157283 0.98809634 8 11 102 0.833333333 0.698970004 0.166666667 0.5 0.708333333 14 1 3 20 2L:2157222-2157288 7 10 261 FBgn0000097 634.18 16.10666667 24.79666667 0.015768394 0.620860927 0.403280011 7 8 7.5 0.25 dme-miR-305-3p 8mer-A1 ATGTGCCA 2L 2157603 2157610 - 2L_2157603_2157610_- 0.611859064 0.611069385 0.611464224 0.000558402 aop FBtr0077850|FBtr0330660|FBtr0330658|FBtr0330659|FBtr0077851 2156482|2157425|2156482|2156790|2156482 2158164|2158164|2158164|2158164|2158164 2L - 2157588 2157859 3'utr aop FlyBase G6958.1 AATTCAATTCTTGATCAAAGGCTTCTTCTAACCATTGCTGCTTTATACTTTCTTTGCGGCTGTCAAACGACCTTTCCGACTTTCTGTACATAGAAATCACATCTGCATAAACCAACAAACAATCATACATAAATACATTTATTTTATACATCAAGCGTATTTATTAAGCTAAGCTAAGCAAGAGCAGAGTGCATGTAATTTCGTTGTTGTAAGTAGATTTCTTGAGCCGGCGCAGCGCAGCCTTCGATTATGTGCCAATTTCTACATTTATC 54 2157611 0.985471234 31 49 409 0.869565217 1.477121255 0.202898551 0.148148148 0.333333333 54 8 1 60 2L:2157588-2157859 8 aop FBtr0330659|FBtr0077851|FBtr0330660|FBtr0330658|FBtr0077850 2156790|2156482|2157425|2156482|2156482 2158164|2158164|2158164|2158164|2158164 ATGTGCCA 8mer-A1 dme-miR-305-3p 2L - 2157584 2157694 3'utr aop FlyBase G5445.1 AAGCTAAGCTAAGCAAGAGCAGAGTGCATGTAATTTCGTTGTTGTAAGTAGATTTCTTGAGCCGGCGCAGCGCAGCCTTCGATTATGTGCCAATTTCTACATTTATCAAAC 32 2157637 0.965322325 13 30 157 0.976190476 1.311753861 0.166666667 0.28125 0.452380952 32 0 1 41 2L:2157584-2157694 8 9 262 FBgn0000097 634.18 16.10666667 24.79666667 0.014191554 0.558774834 0.36295201 1 27 14 0.25 dme-miR-980-3p 7mer-A1 GCAGCTA 2L 21647196 21647202 + 2L_21647196_21647202_+ 0.814455126 0.812439143 0.813447135 0.001425527 Ac3 FBtr0085897 21646824 21647964 2L + 21647167 21647216 3'utr Ac3 FlyBase G5933.1 AGCTCTGTAATATTTAAGTGATTCGCTTTGCAGCTAATTGATGTGCAGAT 62 21647194 0.78478928 6 59 620 0.955882353 1.511883361 0.352941176 0.080645161 0.161764706 62 2 1 65 2L:21647167-21647216 7 Ac3 FBtr0085897 21646824 21647964 GCAGCTA 7mer-A1 dme-miR-980-3p 2L + 21647170 21647216 3'utr Ac3 FlyBase G4606.1 TCTGTAATATTTAAGTGATTCGCTTTGCAGCTAATTGATGTGCAGAT 41 21647193 0.796142289 5 41 432 1 1.755874856 0.333333333 0.268292683 0.473684211 41 0 0 57 2L:21647170-21647216 7 51.5 263 FBgn0023416 614.5733333 23.08666667 35.21333333 0.083797974 2.230724805 1.462514199 2 3 2.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2L 21664320 21664326 - 2L_21664320_21664326_- 0.823346737 0.823340525 0.823343631 4.38E-06 CG2225 FBtr0085917|FBtr0304885|FBtr0085915|FBtr0085914|FBtr0332967|FBtr0100618|FBtr0085918 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 2L - 21664178 21664371 3'utr CG2225 FlyBase G12241.1 GAAGTTGAGTGGTTGGAAAGGAAAATTGCAATATGTAAACGTTTACTAGTCATTAAATATAAAAAATGAACCATAAAAAATGTATAAGAAAGATAACATATTTTTTATTAACACTCAGTGGATGCCAAAAACATAAATATTGGAATCATTTTATCAGCGGGAGCTGTGGCACTCAAAAACAAGATAAAATTATT 108 21664328 0.983677919 21 99 767 0.9375 1.77815125 0.2578125 0.157407407 0.2890625 108 7 1 120 2L:21664178-21664371 7 CG2225 FBtr0100618|FBtr0085918|FBtr0085914|FBtr0332967|FBtr0304885|FBtr0085915|FBtr0085917 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 21664296 21664373 3'utr CG2225 FlyBase G9377.1 ATGAAGTTGAGTGGTTGGAAAGGAAAATTGCAATATGTAAACGTTTACTAGTCATTAAATATAAAAAATGAACCATAA 51 21664319 0.87925287 9 41 369 0.829268293 1.355387658 0.317073171 0.450980392 0.658536585 51 12 2 68 2L:21664296-21664373 7 59 264 FBgn0032957 1484.293333 32.49333333 50.1 0.039749555 1.815757078 1.177644711 2 -7 -2.5 0.25 dme-miR-304-5p 8mer-A1 TGAGATTA 2L 21664568 21664575 - 2L_21664568_21664575_- 0.475685766 0.481009457 0.478347612 0.003764424 CG2225 FBtr0085917|FBtr0304885|FBtr0085915|FBtr0085914|FBtr0332967|FBtr0100618|FBtr0085918 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 2L - 21664480 21664599 3'utr CG2225 FlyBase G12242.1 GAGTGCAACACAGGAAAATCAAGTTGAGATTATAAAAAAATTCTTAAAACTGATACGTATAGAATTTCCAAAAACTGAAACAGAATGAAGTTAAACCCTCCACATTTTAACGAATGTTTG 39 21664576 0.968466409 6 39 217 1 1.643452676 0.090909091 0.128205128 0.227272727 39 0 0 44 2L:21664480-21664599 8 CG2225 FBtr0100618|FBtr0085918|FBtr0085914|FBtr0332967|FBtr0304885|FBtr0085915|FBtr0085917 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 TGAGATTA 8mer-A1 dme-miR-304-5p 2L - 21664530 21664589 3'utr CG2225 FlyBase G9378.1 CAGGAAAATCAAGTTGAGATTATAAAAAAATTCTTAAAACTGATACGTATAGAATTTCCA 33 21664576 0.791235382 5 33 180 1 1.69019608 0.142857143 0.363636364 0.571428571 33 0 0 49 2L:21664530-21664589 8 31 265 FBgn0032957 1484.293333 32.49333333 50.1 0.02088536 0.954041855 0.618762475 1 1 1 0.25 dme-miR-14-3p 8mer-A1 AAGACTGA 2L 21665191 21665198 - 2L_21665191_21665198_- 0.638319473 0.643021631 0.640670552 0.003324887 CG2225 FBtr0085917|FBtr0304885|FBtr0085915|FBtr0085914|FBtr0332967|FBtr0100618|FBtr0085918 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 2L - 21665183 21665242 3'utr CG2225 FlyBase G12245.1 GAAGACAATTGGAAAATTCAAATGCACAAAAGCCGTGAATCGTAAAGACTGACAATGAAA 21 21665200 0.940429867 3 20 79 0.958333333 1.361727836 0.375 0.142857143 0.25 21 1 0 23 2L:21665183-21665242 8 CG2225 FBtr0100618|FBtr0085918|FBtr0085914|FBtr0332967|FBtr0304885|FBtr0085915|FBtr0085917 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 AAGACTGA 8mer-A1 dme-miR-14-3p 2L - 21665179 21665223 3'utr CG2225 FlyBase G9381.1 AAATGCACAAAAGCCGTGAATCGTAAAGACTGACAATGAAAAAAA 12 21665200 0.943823986 4 11 40 0.85 1.230448921 0.35 0.333333333 0.6 12 3 0 17 2L:21665179-21665223 8 14.5 266 FBgn0032957 1484.293333 32.49333333 50.1 0.009768959 0.446245384 0.289421158 2 2 2 0.25 dme-miR-79-3p 6mer3-8 TAGCTT 2L 21728586 21728591 + 2L_21728586_21728591_+ 0.998876655 0.988351508 0.993614082 0.00744244 CG31619 FBtr0085901|FBtr0339131|FBtr0110959|FBtr0339132|FBtr0307497|FBtr0301000 21728172|21728122|21728172|21728172|21728172|21728172 21729051|21729051|21729051|21729051|21729051|21729051 2L + 21728554 21728605 3'utr CG31619 FlyBase G5974.1 TGACATCCATTGTCGGTTCATAGCACTGAAATTAGCTTCGATTACCACTTAG 29 21728574 0.71678821 5 28 215 0.970588235 1.217483944 0.147058824 0.137931034 0.264705882 29 0 1 33 2L:21728554-21728605 6 CG31619 FBtr0339132|FBtr0110959|FBtr0339131|FBtr0085901|FBtr0301000|FBtr0307497 21728172|21728172|21728122|21728172|21728172|21728172 21729051|21729051|21729051|21729051|21729051|21729051 TAGCTT 6mer3-8 dme-miR-79-3p 2L + 21728562 21728601 3'utr CG31619 FlyBase G4638.1 ATTGTCGGTTCATAGCACTGAAATTAGCTTCGATTACCAC 13 21728586 0.72101481 6 12 83 0.944444444 1.230448921 0.055555556 0.307692308 0.5 13 1 0 17 2L:21728562-21728601 6 16.5 267 FBgn0051619 2354.866667 61.1 93.72666667 0.007006766 0.2700491 0.176043815 12 0 6 0.25 dme-miR-34-5p 6mer3-8 CACTGC 2L 21740337 21740342 - 2L_21740337_21740342_- 0.881124667 0.959438674 0.92028167 0.05537636 step FBtr0332471 21740039 21741582 2L - 21740316 21740384 3'utr step FlyBase G12275.1 AATTGCAATATTATAAATACTTTAGTTTGATTTGTACATATACACTGCTGTGCACTATCCATTTCGTAT 8 21740338 0.979079289 6 8 66 1 1.113943352 0.153846154 0.5 0.692307692 8 0 0 13 2L:21740316-21740384 6 step FBtr0332471 21740039 21741582 CACTGC 6mer3-8 dme-miR-34-5p 2L - 21740322 21740363 3'utr step FlyBase G9402.1 TTAGTTTGATTTGTACATATACACTGCTGTGCACTATCCATT 7 21740338 0.741299185 5 7 56 1 1.041392685 0.090909091 0.428571429 0.636363636 7 0 0 11 2L:21740322-21740363 6 5.5 268 FBgn0086779 2401.73 84.77 129.5966667 0.002290016 0.064881444 0.042439363 -4 -4 -4 0.25 dme-miR-14-3p 7mer-A1 AGACTGA 2L 21740514 21740520 - 2L_21740514_21740520_- 0.769375791 0.77247405 0.770924921 0.002190758 step FBtr0332471 21740039 21741582 2L - 21740505 21740702 3'utr step FlyBase G12276.2 AAGAATGTATAAATTGCCCGTTGATGTGTAAGCAAAAAACTATAAGTCAAAAAATCATCAAACAAGAACTCTGTTGCCAGCACTGATTTTATAGTAGCCTAAAGATGCTATTAGAAAATAGTTATAGTAAATTGTGTGTCGTGGCGCTGTGATATCATTGATAGGAAAGAGCTTCTGTGTTGAGACTGAAAAAACATT 859 21740523 0.81204467 35 833 5454 0.968335036 2.374748346 0.233912155 0.124563446 0.231869254 859 28 3 948 2L:21740505-21740702 7 step FBtr0332471 21740039 21741582 AGACTGA 7mer-A1 dme-miR-14-3p 2L - 21740505 21740649 3'utr step FlyBase G9404.1 ATCATCAAACAAGAACTCTGTTGCCAGCACTGATTTTATAGTAGCCTAAAGATGCTATTAGAAAATAGTTATAGTAAATTGTGTGTCGTGGCGCTGTGATATCATTGATAGGAAAGAGCTTCTGTGTTGAGACTGAAAAAACATT 500 21740523 0.732976311 24 482 3131 0.966942149 2.147367108 0.252066116 0.34 0.545454545 500 20 4 702 2L:21740505-21740649 7 610 269 FBgn0086779 2401.73 84.77 129.5966667 0.253983587 7.195941961 4.706911186 3 3 3 0.25 dme-miR-190-5p 8mer-A1 ACATATCA 2L 2210047 2210054 - 2L_2210047_2210054_- 0.410512838 0.581394543 0.495953691 0.120831609 CG15385 FBtr0077845|FBtr0331649 2209572|2209944 2210248|2210248 2L - 2210020 2210070 3'utr CG15385 FlyBase G6989.1 ACAAATCGAAAACGATACATATCAATGGAGCACTTGTTAGACTATAAGAAC 25 2210055 0.948275306 5 20 120 0.8125 1.414973348 0.15625 0.24 0.40625 25 6 0 26 2L:2210020-2210070 8 CG15385 FBtr0331649|FBtr0077845 2209944|2209572 2210248|2210248 ACATATCA 8mer-A1 dme-miR-190-5p 2L - 2210037 2210069 3'utr CG15385 FlyBase G5475.1 CAAATCGAAAACGATACATATCAATGGAGCACT 8 2210055 0.857112441 2 8 30 1 1.146128036 0.214285714 0.625 0.785714286 8 0 0 14 2L:2210037-2210069 8 15.5 270 FBgn0031397 4.333333333 0.213333333 0.323333333 3.576923077 72.65625 47.93814433 1 1 1 0.25 dme-miR-1008-3p 6mer2-7 GCTGTG 2L 22125633 22125638 + 2L_22125633_22125638_+ 0.837364526 0.654078813 0.745721669 0.129602561 CG3651 FBtr0331657 22124938 22126614 2L + 22125606 22125664 3'utr CG3651 FlyBase G6026.1 AGTGCTTAAACTTTTCTCATAAGGCTGGCTGTGTTCTGCACGTCGTTCAAGGGCCGTGA 46 22125629 0.898311189 6 44 432 0.964285714 1.431363764 0.375 0.152173913 0.303571429 46 1 1 54 2L:22125606-22125664 6 CG3651 FBtr0331657 22124938 22126614 GCTGTG 6mer2-7 dme-miR-1008-3p 2L + 22125589 22125652 3'utr CG3651 FlyBase G4689.1 TTAACGACTGCAATCCAAGTGCTTAAACTTTTCTCATAAGGCTGGCTGTGTTCTGCACGTCGTT 24 22125631 0.988125073 8 23 207 0.90625 0.860338007 0.40625 0.208333333 0.40625 24 0 3 29 2L:22125589-22125652 6 33.5 271 FBgn0032974 1358.31 57.56666667 88.28333333 0.024663 0.58193399 0.379460072 4 2 3 0.25 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 2L 22158795 22158800 + 2L_22158795_22158800_+ 0.690661135 0.988057893 0.839359514 0.210291294 CG42748 FBtr0333745|FBtr0303274|FBtr0303272|FBtr0333742|FBtr0303273|FBtr0303271 22157031|22158743|22158743|22158743|22156833|22158743 22159611|22161348|22159611|22159611|22159611|22159611 2L + 22158754 22158811 5'utr CG42748 FlyBase G6049.1 AGAGTAGAAATACTGGTAACCGGCAGTTTATGCTTTTTGTTTGGTGCACGGCATTTTT 8 22158795 0.991179188 3 6 69 0.888888889 0.903089987 0.111111111 0.125 0.222222222 8 1 0 8 2L:22158754-22158811 6 CG42748 FBtr0303274|FBtr0333745|FBtr0303271|FBtr0303273|FBtr0333742|FBtr0303272 22158743|22157031|22158743|22156833|22158743|22158743 22161348|22159611|22159611|22159611|22159611|22159611 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 2L + 22158783 22158828 5'utr CG42748 FlyBase G4706.1 ATGCTTTTTGTTTGGTGCACGGCATTTTTGTAGCCTATCTGCAAAC 7 22158811 0.970251608 5 7 64 1 1.176091259 0.2 0.571428571 0.8 7 0 0 15 2L:22158783-22158828 6 5 272 FBgn0261802 1164 24.91333333 38.18666667 0.004295533 0.200695745 0.130935754 0 -16 -8 0.25 dme-miR-184-5p 6mer2-7 GATAAG 2L 22166277 22166282 - 2L_22166277_22166282_- 0.921760173 0.869606882 0.895683528 0.036877952 Clamp FBtr0100407|FBtr0085964 22165718|22165964 22166551|22166551 2L - 22166226 22166411 3'utr Clamp FlyBase G12338.1 ATATATCACCACAATGATATTAAAGAATAGAAAACGATGTTCCATCGTTAACACTTCAGCTGCATATGTCCTTTCTCCACTTTCATGTGGGATCTTCAAAAATGGGCGAAACCCAAAAACGCTTTTTACGATAAGCATACAAATGAACCTAATTTATTTGATAGCTTGTATAATATACTTAAACAT 207 22166286 0.931790669 28 198 1369 0.948207171 1.899455702 0.131474104 0.178743961 0.322709163 207 11 2 238 2L:22166226-22166411 6 Clamp FBtr0085964|FBtr0100407 22165964|22165718 22166551|22166551 GATAAG 6mer2-7 dme-miR-184-5p 2L - 22166244 22166370 3'utr Clamp FlyBase G9452.2 CCATCGTTAACACTTCAGCTGCATATGTCCTTTCTCCACTTTCATGTGGGATCTTCAAAAATGGGCGAAACCCAAAAACGCTTTTTACGATAAGCATACAAATGAACCTAATTTATTTGATAGCTTG 123 22166286 0.915477747 22 115 751 0.968421053 1.963787827 0.121052632 0.422764228 0.626315789 123 5 1 184 2L:22166244-22166370 6 48 273 FBgn0032979 2178.656667 96.29333333 147.5566667 0.022031925 0.498476876 0.325298755 4 4 4 0.25 dme-miR-252-5p 8mer-m1 GTACTTAG 2L 2220526 2220533 + 2L_2220526_2220533_+ 0.63216089 0.633502687 0.632831788 0.000948796 mio FBtr0077835 2220409 2220625 2L + 2220463 2220553 3'utr mio FlyBase G1198.1 ATGCATTAAGTTGTTGATTTGTTCCAAACGCGTGCGCCTTAAACAAACTCAGAAGTGTTCATTGTACTTAGACAAGGGATGTGCCCGTAGC 29 2220524 0.757774811 7 26 191 0.948717949 1.267171728 0.153846154 0.172413793 0.384615385 29 1 1 37 2L:2220463-2220553 8 mio FBtr0077835 2220409 2220625 GTACTTAG 8mer-m1 dme-miR-252-5p 2L + 2220478 2220550 3'utr mio FlyBase G938.1 GATTTGTTCCAAACGCGTGCGCCTTAAACAAACTCAGAAGTGTTCATTGTACTTAGACAAGGGATGTGCCCGT 16 2220525 0.979047126 6 15 100 0.956521739 1.342422681 0.347826087 0.3125 0.52173913 16 1 0 22 2L:2220478-2220550 8 18.5 274 FBgn0031399 136 5.556666667 8.516666667 0.136029412 3.329334133 2.17221135 2 1 1.5 0.25 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 2230248 2230254 + 2L_2230248_2230254_+ 0.759194759 0.759822422 0.75950859 0.00044378 sau FBtr0100673|FBtr0077840 2230125|2230125 2231099|2231088 2L + 2230223 2230279 3'utr sau FlyBase G1218.2 TTGCTGCTTTTGTTTTAGAAACTTTGCTGTGAGTGGAACCGAATCGGGCGATAGGAT 393 2230246 0.736067226 8 377 2570 0.972457627 1.883661435 0.527542373 0.152671756 0.294491525 393 8 5 459 2L:2230223-2230279 7 sau FBtr0100674|FBtr0077840|FBtr0100673 2230125|2230125|2230125 2230413|2231088|2231099 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L + 2230188 2230299 3'utr sau FlyBase G953.1 AACACAGAAATACAGACCCACATCTGGAATACATTTTGCTGCTTTTGTTTTAGAAACTTTGCTGTGAGTGGAACCGAATCGGGCGATAGGATTTTCTTAAATGGCAACCACC 288 2230246 0.974789341 16 282 1886 0.967667436 1.844062773 0.51039261 0.361111111 0.575057737 288 9 5 419 2L:2230188-2230299 7 328 275 FBgn0267378 3863.503333 238.82 367.2833333 0.084897041 1.373419312 0.893043518 2 2 2 0.25 dme-miR-184-5p 6mer3-8 TGATAA 2L 2230630 2230635 + 2L_2230630_2230635_+ 0.994964932 0.958116472 0.976540702 0.026055754 sau FBtr0100673|FBtr0077840 2230125|2230125 2231099|2231088 2L + 2230620 2230661 3'utr sau FlyBase G1219.1 AAGAAAACTTTGATAAAGTCTGGGCAAGCTGCGTGCGATTGT 8 2230633 0.949137054 3 8 44 1 0.903089987 0.125 0 0 8 0 0 8 2L:2230620-2230661 6 sau FBtr0077840|FBtr0100673 2230125|2230125 2231088|2231099 TGATAA 6mer3-8 dme-miR-184-5p 2L + 2230621 2230649 3'utr sau FlyBase G955.1 AGAAAACTTTGATAAAGTCTGGGCAAGCT 5 2230632 0.724736941 2 3 25 0.666666667 0.77815125 0.333333333 0.4 0.666666667 5 3 0 6 2L:2230621-2230649 6 5.5 276 FBgn0267378 3863.503333 238.82 367.2833333 0.001423578 0.023029897 0.014974815 -3 -2 -2.5 0.25 dme-miR-1003-3p 7mer-A1 TGTGAGA 2L 2231425 2231431 - 2L_2231425_2231431_- 0.820833939 0.710670959 0.765752449 0.077896934 Sec24CD FBtr0329964 2231104 2232047 2L - 2231394 2231434 3'utr Sec24CD FlyBase G7001.1 TCGTGTGAGAATTACTCGACTTATATGGTATATTGCCCCTT 5 2231411 0.976544323 3 4 42 1 0.84509804 0.142857143 0.2 0.428571429 5 0 0 7 2L:2231394-2231434 7 Sec24CD FBtr0329964 2231104 2232047 TGTGAGA 7mer-A1 dme-miR-1003-3p 2L - 2231393 2231429 3'utr Sec24CD FlyBase G5488.1 TGAGAATTACTCGACTTATATGGTATATTGCCCCTTC 5 2231412 0.975355028 4 5 38 1 1 0.2 0.6 0.8 5 0 0 10 2L:2231393-2231429 5 3 277 FBgn0262126 1107.336667 30.21333333 46.15333333 0.002709203 0.09929391 0.065000722 -20 -19 -19.5 0.25 dme-bantam-3p 7mer-m8 TGATCTC 2L 22533675 22533681 - 2L_22533675_22533681_- 0.537569222 0.419000949 0.478285085 0.083840449 RpL5 FBtr0344793 22532277 22534868 2L - 22533592 22533705 3'utr RpL5 FlyBase G12384.1 ATCTAAACCTCTAATCGTGCAAACTGATCTCTTTCTGTACTATAAAGTTTAATTTTAATTTTGCGTAGCTAGAGATAGTTTTCGTTGAGCTGATGATCTCCTTTCTGTGCTAGA 43 22533673 0.817529416 13 41 376 0.958333333 1.662757832 0.375 0.11627907 0.208333333 43 2 0 46 2L:22533592-22533705 7 RpL5 FBtr0344793 22532277 22534868 TGATCTC 7mer-m8 dme-bantam-3p 2L - 22533591 22533693 3'utr RpL5 FlyBase G9489.1 AATCGTGCAAACTGATCTCTTTCTGTACTATAAAGTTTAATTTTAATTTTGCGTAGCTAGAGATAGTTTTCGTTGAGCTGATGATCTCCTTTCTGTGCTAGAT 34 22533674 0.988880417 14 32 301 0.941176471 1.681241237 0.352941176 0.294117647 0.529411765 34 3 0 48 2L:22533591-22533693 7 23 278 FBgn0064225 23918.45333 2812.8 4275.716667 0.000961601 0.008176906 0.005379215 -8 -7 -7.5 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 22534570 22534577 - 2L_22534570_22534577_- 0.379326848 0.393909245 0.386618046 0.010311314 RpL5 FBtr0344793|FBtr0332633 22532277|22533915 22534868|22534868 2L - 22534553 22534596 3'utr RpL5 FlyBase G12386.1 TGGTAAGATGGGAACTTGTGTACTTAATTCGGTTTCGGCCGCAG 33 22534578 0.740691695 6 31 310 0.972972973 1.556302501 0.432432432 0.121212121 0.216216216 33 1 0 36 2L:22534553-22534596 8 RpL5 FBtr0344793|FBtr0332633 22532277|22533915 22534868|22534868 GTACTTAA 8mer-A1 dme-miR-252-5p 2L - 22534525 22534596 3'utr RpL5 FlyBase G9490.1 TGGTAAGATGGGAACTTGTGTACTTAATTCGGTTTCGGCCGCAGTGGAACACTATTTCATCAATTCACTGCT 22 22534578 0.988479049 5 22 205 1 1.544068044 0.285714286 0.318181818 0.571428571 22 0 0 35 2L:22534525-22534596 8 26 279 FBgn0064225 23918.45333 2812.8 4275.716667 0.001087027 0.009243458 0.006080852 1 1 1 0.25 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2L 22540756 22540761 + 2L_22540756_22540761_+ 0.794276887 0.841896866 0.818086876 0.033672425 CG17490 FBtr0332629|FBtr0111259 22540487|22540487 22541293|22540900 2L + 22540727 22540762 5'utr CG17490 FlyBase G6140.1 CATCCCATCAGAACTATGCTATGTGATTTTTGAAGT 11 22540755 0.590841456 6 10 103 0.923076923 1.079181246 0.384615385 0.181818182 0.307692308 11 1 0 12 2L:22540727-22540762 6 CG17490 FBtr0111259|FBtr0332629 22540487|22540487 22540900|22541293 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2L + 22540732 22540809 5'utr CG17490 FlyBase G4785.1 CATCAGAACTATGCTATGTGATTTTTGAAGTAATAGCGCAAACATTGTTGTTGTCTGGACTTTAGATGATAAATCAAT 13 22540754 0.778974794 6 13 117 1 1.361727836 0.130434783 0.615384615 0.782608696 13 0 0 23 2L:22540732-22540809 6 9.5 280 FBgn0040009 384.5033333 18.73666667 28.78 0.024707198 0.507027219 0.330090341 1 2 1.5 0.25 dme-miR-1003-3p 8mer-A1 ATGTGAGA 2L 22992406 22992413 + 2L_22992406_22992413_+ 0.631343473 0.617516278 0.624429875 0.009777307 cta FBtr0334157 22991942 22992951 2L + 22992380 22992456 3'utr cta FlyBase G6224.1 CGTTTTGAAAAGCCATTAACCAATTTATGTGAGATTTTAAAAGCAGCTGAAATATTTTTAAATGGTCGTTAAAAGTA 48 22992404 0.827311584 10 43 400 0.870967742 1.73239376 0.064516129 0.229166667 0.403225806 48 8 0 54 2L:22992380-22992456 8 cta FBtr0334157 22991942 22992951 ATGTGAGA 8mer-A1 dme-miR-1003-3p 2L + 22992365 22992456 3'utr cta FlyBase G4851.1 TTTTGCGTGCATCTTCGTTTTGAAAAGCCATTAACCAATTTATGTGAGATTTTAAAAGCAGCTGAAATATTTTTAAATGGTCGTTAAAAGTA 41 22992404 0.988034305 15 38 348 0.901639344 1.740362689 0.098360656 0.390243902 0.590163934 41 6 0 55 2L:22992365-22992456 8 37 281 FBgn0000384 1592.86 81.62333333 124.9 0.023228658 0.453301752 0.29623699 2 2 2 0.25 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 22992669 22992674 + 2L_22992669_22992674_+ 0.986742754 0.875208947 0.93097585 0.078866377 cta FBtr0334157 22991942 22992951 2L + 22992652 22992719 3'utr cta FlyBase G6227.1 CGACTTCTAATGGAATGATGTGACTGTATACCACACTTTAAAACGGATTTAAAATAAATTAAAAAATT 18 22992670 0.970685795 8 18 116 1 1.342422681 0.045454545 0.222222222 0.363636364 18 0 0 22 2L:22992652-22992719 6 cta FBtr0334157 22991942 22992951 ATGTGA 6mer3-8 dme-miR-1003-3p 2L + 22992649 22992684 3'utr cta FlyBase G4853.1 TATCGACTTCTAATGGAATGATGTGACTGTATACCA 7 22992670 0.967233462 3 7 43 1 1.176091259 0 0.428571429 0.733333333 7 0 0 15 2L:22992649-22992684 6 11 282 FBgn0000384 1592.86 81.62333333 124.9 0.006905817 0.134765386 0.088070456 -1 -1 -1 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2L 23161222 23161228 - 2L_23161222_23161228_- 0.671534197 0.400302389 0.535918293 0.191789845 CG12567 FBtr0300704|FBtr0113705|FBtr0300703|FBtr0300702|FBtr0344847|FBtr0113704 23161120|23161120|23161120|23161120|23161120|23161120 23161957|23162856|23162903|23161957|23161957|23161957 2L - 23161167 23161246 3'utr CG12567 FlyBase G12434.1 CTTTTAATATATGTAGTAACCAAAGTGCTCAAAATTAAGAGATACATTATAGGTAGGATAATGTTACTTATGTACATTTT 14 23161221 0.985153247 7 14 110 1 1.176091259 0 0.071428571 0.133333333 14 0 0 15 2L:23161167-23161246 7 CG12567 FBtr0300702|FBtr0300703|FBtr0113705|FBtr0300704|FBtr0113704|FBtr0344847 23161120|23161120|23161120|23161120|23161120|23161120 23161957|23162903|23162856|23161957|23161957|23161957 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 23161206 23161238 3'utr CG12567 FlyBase G9526.1 ATATGTAGTAACCAAAGTGCTCAAAATTAAGAG 5 23161220 0.744184911 4 5 19 1 0.698970004 0 0 0 5 0 0 5 2L:23161206-23161238 7 7 283 FBgn0039958 1066.65 65.05666667 99.82333333 0.006562603 0.107598504 0.070123886 -7 -8 -7.5 0.25 dme-miR-31a-5p 8mer-A1 TCTTGCCA 2L 23162033 23162040 - 2L_23162033_23162040_- 0.558371384 0.506054452 0.532212918 0.036993635 CG12567 FBtr0113705|FBtr0300703 23161120|23161120 23162856|23162903 2L - 23161998 23162083 3'utr CG12567 FlyBase G12439.1 ACGTACAAGACACGCTTTGAGCAATCCATAAAACAACCTCAATTCTTGCCAGGTGATTCCAAAAACTGTAACTGTGCAATATTTCA 48 23162041 0.79079679 7 46 260 0.981481481 1.423245874 0.018518519 0.083333333 0.185185185 48 0 1 53 2L:23161998-23162083 8 CG12567 FBtr0300703|FBtr0113705 23161120|23161120 23162903|23162856 TCTTGCCA 8mer-A1 dme-miR-31a-5p 2L - 23162000 23162082 3'utr CG12567 FlyBase G9531.1 CGTACAAGACACGCTTTGAGCAATCCATAAAACAACCTCAATTCTTGCCAGGTGATTCCAAAAACTGTAACTGTGCAATATTT 40 23162041 0.968761512 5 39 216 1 1.799340549 0.031746032 0.375 0.603174603 40 0 0 63 2L:23162000-23162082 8 38 284 FBgn0039958 1066.65 65.05666667 99.82333333 0.035625557 0.584106164 0.380672521 1 1 1 0.25 dme-miR-305-3p 6mer2-7 TGTGCC 2L 23162361 23162366 - 2L_23162361_23162366_- 0.666192565 0.570422877 0.618307721 0.067719404 CG12567 FBtr0113705|FBtr0300703 23161120|23161120 23162856|23162903 2L - 23162315 23162434 5'utr CG12567 FlyBase G12442.1 TTTGAAAGCCGACAAGGACTTTTTCCCAATACCGAATATGTTTTCGACTTAGAGCTACCACTTGACTTTGTGCCTCAAAACGCTGACGGGGAGGTCCAGGCCTTTGAGCTGCTAACAGCC 60 23162366 0.840406626 14 59 416 0.987012987 1.880813592 0.116883117 0.233333333 0.402597403 60 1 0 76 2L:23162315-23162434 6 CG12567 FBtr0300703|FBtr0113705 23161120|23161120 23162903|23162856 TGTGCC 6mer2-7 dme-miR-305-3p 2L - 23162323 23162393 5'utr CG12567 FlyBase G9532.1 TTTCGACTTAGAGCTACCACTTGACTTTGTGCCTCAAAACGCTGACGGGGAGGTCCAGGCCTTTGAGCTGC 27 23162366 0.980996732 6 27 193 1 1.653212514 0.155555556 0.333333333 0.6 27 0 0 45 2L:23162323-23162393 6 34.5 285 FBgn0039958 1066.65 65.05666667 99.82333333 0.032344255 0.530306912 0.345610579 0 0 0 0.25 dme-miR-276a-3p 6mer3-8 AGTTCC 2L 2369659 2369664 + 2L_2369659_2369664_+ 0.76276064 0.528506822 0.645633731 0.16564245 Axud1 FBtr0077762|FBtr0330666|FBtr0330665|FBtr0077763 2368980|2368980|2368980|2368980 2370137|2370137|2370137|2370137 2L + 2369542 2369682 3'utr Axud1 FlyBase G1229.1 AATCGGACTCAAGTCGCCTTGTATAAATCATTTTATTGTTAAATTCGAGTTAGTCTCTAAGTACATACTGTAGTTTAGTTACTTTGTTGCTTAAGTTAAGTTCACTTCGCAAAATCAAGTTCCCTTCCTACTCAACTTTAA 20 2369661 0.990769375 10 16 170 0.833333333 1 0.041666667 0.15 0.291666667 20 3 1 20 2L:2369542-2369682 6 Axud1 FBtr0077763|FBtr0330665|FBtr0330666|FBtr0077762 2368980|2368980|2368980|2368980 2370137|2370137|2370137|2370137 AGTTCC 6mer3-8 dme-miR-276a-3p 2L + 2369630 2369676 3'utr Axud1 FlyBase G962.1 GCTTAAGTTAAGTTCACTTCGCAAAATCAAGTTCCCTTCCTACTCAA 6 2369661 0.969950406 3 6 36 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 2L:2369630-2369676 6 8 286 FBgn0261647 491.4533333 14.28 22 0.01627825 0.56022409 0.363636364 -2 -2 -2 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2L 2422637 2422642 + 2L_2422637_2422642_+ 0.921863777 0.830912883 0.87638833 0.064311998 CG9886 FBtr0077770|FBtr0077770|FBtr0077770|FBtr0335462|FBtr0335462|FBtr0335462 2422414|2422414|2422414|2422414|2422414|2422414 2422910|2422910|2422910|2424647|2424647|2424647 2L + 2422622 2422648 3'utr CG9886 FlyBase G1241.1 AAATTCAAATAATTTTGTGATCTTTAT 5 2422635 0.798768526 4 5 49 1 0.698970004 0 0 0 5 0 0 5 2L:2422622-2422648 6 CG9886 FBtr0077770|FBtr0077770|FBtr0077770|FBtr0335462|FBtr0335462|FBtr0335462 2422414|2422414|2422414|2422414|2422414|2422414 2422910|2422910|2422910|2424647|2424647|2424647 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 2422626 2422656 3'utr CG9886 FlyBase G971.1 TCAAATAATTTTGTGATCTTTATGCTCTGAG 5 2422636 0.685291148 3 4 49 0.857142857 0.77815125 0.857142857 0.4 0.571428571 5 1 0 6 2L:2422626-2422656 6 4.5 287 FBgn0031428 49.66666667 2.643333333 4.073333333 0.090604027 1.702395965 1.104746318 2 1 1.5 0.25 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 2497415 2497422 + 2L_2497415_2497422_+ 0.624841943 0.624821646 0.624831794 1.44E-05 oaf FBtr0077777|FBtr0077780|FBtr0077778 2496696|2497161|2496696 2498846|2498846|2498454 2L + 2497304 2497462 3'utr oaf FlyBase G1249.1 TATACTACAGCAAAAAAGGAGTAAAACGAAATAAATGTAAAAAAGTGCTTCTGTATACTATGTATATATATGTATATTTAACGATGATTAGCTTTTAGCCAGCTTACGTTTTACGCTTATGCCGGATTTAAGTTTAGACCTAGATTAGGTGTCCTTATT 46 2497391 0.989282309 15 44 412 0.962962963 1.716003344 0.240740741 0.152173913 0.277777778 46 2 0 52 2L:2497304-2497462 8 oaf FBtr0077780|FBtr0077778|FBtr0077777 2497161|2496696|2496696 2498846|2498454|2498846 TACGCTTA 8mer-A1 dme-miR-965-3p 2L + 2497373 2497467 3'utr oaf FlyBase G976.1 ATGTATATTTAACGATGATTAGCTTTTAGCCAGCTTACGTTTTACGCTTATGCCGGATTTAAGTTTAGACCTAGATTAGGTGTCCTTATTTAATT 21 2497414 0.988198333 6 20 189 0.970588235 1.217483944 0.411764706 0.428571429 0.647058824 21 0 1 33 2L:2497373-2497467 8 17 288 FBgn0011818 255.6 10.51666667 16.17333333 0.066510172 1.616481775 1.051112943 24 1 12.5 0.25 dme-bantam-3p 6mer3-8 TGATCT 2L 2497552 2497557 + 2L_2497552_2497557_+ 0.646641465 0.682362755 0.66450211 0.025258773 oaf FBtr0077777|FBtr0077780|FBtr0077778 2496696|2497161|2496696 2498846|2498846|2498454 2L + 2497534 2497563 3'utr oaf FlyBase G1250.1 TCCTTTCCTACTACAGTGTGATCTTTTATC 10 2497545 0.769796121 5 10 88 1 1.176091259 0 0.3 0.533333333 10 0 0 15 2L:2497534-2497563 6 oaf FBtr0077780|FBtr0077778|FBtr0077777 2497161|2496696|2496696 2498846|2498454|2498846 TGATCT 6mer3-8 dme-bantam-3p 2L + 2497531 2497563 3'utr oaf FlyBase G977.1 TAATCCTTTCCTACTACAGTGTGATCTTTTATC 9 2497546 0.782081952 4 9 97 1 1.113943352 0 0.444444444 0.615384615 9 0 0 13 2L:2497531-2497563 6 9.5 289 FBgn0011818 255.6 10.51666667 16.17333333 0.037167449 0.903328051 0.587386645 7 6 6.5 0.25 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2L 2756584 2756589 + 2L_2756584_2756589_+ 0.922499398 0.880607285 0.901553342 0.029622188 Bacc FBtr0307080|FBtr0335125 2756293|2756293 2757975|2757920 2L + 2756543 2756774 5'utr-coding Bacc FlyBase G1300.2 ACTTTTTTTATAAAAAACTACAAAACAAACAAAAATTGTAATTGAAGGCATTTTCGTATAAACGCAACCTATACGGAATCCAACAAAAAGTAAACATCCCCACTATATACAAGAACAAAACAAAACCAAAATCTTTCTTTCCTTTATCTCATAAGTCCTAATTTAAACGCCCAGTTGATGCGTAAACCAAGATATACAAAGATTTCAAATGTAGCGTAAACGAAGCCCGCGA 111 2756578 0.970383919 30 99 603 0.911764706 1.61630043 0.147058824 0.216216216 0.360294118 111 10 2 124 2L:2756543-2756774 6 Bacc FBtr0307080|FBtr0335125 2756293|2756293 2757975|2757920 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2L + 2756526 2756662 5'utr Bacc FlyBase G1011.1 AATTGTATTTTATGTGTACTTTTTTTATAAAAAACTACAAAACAAACAAAAATTGTAATTGAAGGCATTTTCGTATAAACGCAACCTATACGGAATCCAACAAAAAGTAAACATCCCCACTATATACAAGAACAAAA 53 2756578 0.967969085 18 47 264 0.911392405 1.857332496 0.253164557 0.396226415 0.594936709 53 7 0 72 2L:2756526-2756662 6 34.5 290 FBgn0031453 6284.453333 781.6066667 1192.22 0.005489738 0.044139849 0.028937612 6 6 6 0.25 dme-miR-8-3p 8mer-A1 CAGTATTA 2L 2757260 2757267 + 2L_2757260_2757267_+ 0.509609523 0.528118917 0.51886422 0.013088122 Bacc FBtr0307080|FBtr0335125 2756293|2756293 2757975|2757920 2L + 2757236 2757330 5'utr Bacc FlyBase G1304.1 ATGACTAATCTTAAGTACTTATGTCAGTATTAAAGCGAGGGCTTTATTATTCTGTTGATAAGTTGTGCGAGCGAGTCGTTGATAAGCCTAATTCA 217 2757257 0.858738949 9 214 1930 0.987234043 2.365487985 0.370212766 0.069124424 0.140425532 217 3 0 232 2L:2757236-2757330 8 Bacc FBtr0307080|FBtr0335125 2756293|2756293 2757975|2757920 CAGTATTA 8mer-A1 dme-miR-8-3p 2L + 2757236 2757329 5'utr Bacc FlyBase G1014.1 ATGACTAATCTTAAGTACTTATGTCAGTATTAAAGCGAGGGCTTTATTATTCTGTTGATAAGTTGTGCGAGCGAGTCGTTGATAAGCCTAATTC 113 2757257 0.867345377 14 105 951 0.943396226 1.875061263 0.402515723 0.309734513 0.509433962 113 8 1 150 2L:2757236-2757329 8 144.5 291 FBgn0031453 6284.453333 781.6066667 1192.22 0.022993249 0.184875598 0.121202463 3 3 3 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 2L 2763587 2763593 - 2L_2763587_2763593_- 0.521203098 0.521165786 0.521184442 2.64E-05 CG3077 FBtr0335129 2763414 2764305 2L - 2763565 2763609 3'utr CG3077 FlyBase G7083.1 TTCCAGCCCAATGTCTTGTGATTGCTTTTTCAATAAATAAATATT 58 2763594 0.601201452 6 54 474 0.941176471 1.329058719 0.029411765 0.155172414 0.279411765 58 2 2 64 2L:2763565-2763609 7 CG3077 FBtr0335129 2763414 2764305 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 2763555 2763611 3'utr CG3077 FlyBase G5559.1 TCTTCCAGCCCAATGTCTTGTGATTGCTTTTTCAATAAATAAATATTATACTCAAGT 35 2763594 0.986368474 7 34 284 0.961538462 1.22184875 0.038461538 0.428571429 0.615384615 35 0 2 50 2L:2763555-2763611 7 44.5 292 FBgn0031457 325.67 20.19 30.60333333 0.136641385 2.204061417 1.454089968 1 1 1 0.25 dme-miR-283-5p 6mer3-8 TGATAT 2L 2763811 2763816 - 2L_2763811_2763816_- 0.993650311 0.966268072 0.979959191 0.019362139 CG3077 FBtr0335129 2763414 2764305 2L - 2763784 2763838 3'utr CG3077 FlyBase G7084.1 ATGTTTCATGTTACGTATTGTTTGATATCTCTTCAATCGTCTAGTTTGTAGTTTG 11 2763828 0.816704759 5 9 122 0.769230769 1 0.076923077 0.181818182 0.307692308 11 3 0 10 2L:2763784-2763838 6 CG3077 FBtr0335129 2763414 2764305 TGATAT 6mer3-8 dme-miR-283-5p 2L - 2763764 2763884 3'utr CG3077 FlyBase G5560.1 CGTAACGTACTGCTTTGGTAACTTAAAGGTTAGTCTAAGCATATTTATGTTTCATGTTACGTATTGTTTGATATCTCTTCAATCGTCTAGTTTGTAGTTTGTACCCAGTGGGAGTTGTGAT 18 2763817 0.992229097 11 14 171 0.884615385 1.361727836 0.269230769 0.333333333 0.538461538 18 3 0 23 2L:2763764-2763884 6 6.5 293 FBgn0031457 325.67 20.19 30.60333333 0.019958854 0.321941555 0.212395164 12 1 6.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 2868509 2868515 + 2L_2868509_2868515_+ 0.795717935 0.795977584 0.795847759 0.000183636 CG2991 FBtr0077626|FBtr0077626|FBtr0077626|FBtr0077627|FBtr0077627|FBtr0077627|FBtr0077625|FBtr0077625|FBtr0077625 2867666|2867666|2867666|2867666|2867666|2867666|2867666|2867666|2867666 2868548|2868548|2868548|2868548|2868548|2868548|2868548|2868548|2868548 2L + 2868322 2868534 3'utr CG2991 FlyBase G1368.1 AAGTTTACTCCTTAAGAAACTGATTTGTATAAGCTGCGCCCATATATACATACACACGAACATATATAATATATATATATAAATTTTATTGTAGTTACTACACAAAATTTGTCAAAGCAAAGAAAAACAAAACAAAATCCACAAAAGGAAAGAATCCAACATACAATTTAAGTTACCATACAATTTTTGTGATAAAACTAACAAATAAAATAC 236 2868507 0.999997792 26 221 1812 0.940972222 1.65481804 0.038194444 0.177966102 0.326388889 236 12 5 271 2L:2868322-2868534 7 CG2991 FBtr0077627|FBtr0077627|FBtr0077627|FBtr0077625|FBtr0077625|FBtr0077625|FBtr0077626|FBtr0077626|FBtr0077626 2867666|2867666|2867666|2867666|2867666|2867666|2867666|2867666|2867666 2868548|2868548|2868548|2868548|2868548|2868548|2868548|2868548|2868548 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 2868490 2868533 3'utr CG2991 FlyBase G1072.1 TAAGTTACCATACAATTTTTGTGATAAAACTAACAAATAAAATA 112 2868507 0.651175358 8 108 917 0.95483871 1.693140461 0 0.276785714 0.477419355 112 5 2 148 2L:2868490-2868533 7 146.5 294 FBgn0031474 1557.266667 62.85666667 96.35333333 0.094075089 2.330699475 1.520445582 2 2 2 0.25 dme-miR-190-5p 6mer3-8 ACATAT 2L 2868670 2868675 - 2L_2868670_2868675_- 0.999141097 0.999985041 0.999563069 0.000596727 CG31694 FBtr0077685 2868625 2869170 2L - 2868648 2868724 3'utr CG31694 FlyBase G7116.1 TCATAACTTGACATGGCTTTTAATACGCATAATAAGCGGCTCTATGAATACATATATTTTGTAGTAAATAAGTGTAA 14 2868702 0.900111063 7 12 126 0.75 1.079181246 0.0625 0.071428571 0.1875 14 4 0 12 2L:2868648-2868724 6 CG31694 FBtr0077685 2868625 2869170 ACATAT 6mer3-8 dme-miR-190-5p 2L - 2868651 2868702 3'utr CG31694 FlyBase G5583.1 ATACGCATAATAAGCGGCTCTATGAATACATATATTTTGTAGTAAATAAGTG 6 2868669 0.98745762 6 6 39 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2L:2868651-2868702 6 4.5 295 FBgn0051694 1042 47.93 73.36 0.004318618 0.093886918 0.06134133 27 -6 10.5 0.25 dme-miR-965-3p 7mer-m8 TACGCTT 2L 2868815 2868821 - 2L_2868815_2868821_- 0.594077377 0.572360054 0.583218715 0.01535645 CG31694 FBtr0077685 2868625 2869170 2L - 2868733 2868859 3'utr CG31694 FlyBase G7117.1 GAATTTAAATTAACACTGCGATTGTTACGACTGGCATTTACGCTTTGCGATTTGGGTTAACCTCTTTTGTTGTTGATCTTTTTAAATTACAAGCGTAGGAAAACATAGTCTGCTTTAATGCTGCGAA 128 2868837 0.747326193 32 126 1043 0.9875 2.198657087 0.2375 0.1875 0.35 128 2 0 158 2L:2868733-2868859 7 CG31694 FBtr0077685 2868625 2869170 TACGCTT 7mer-m8 dme-miR-965-3p 2L - 2868724 2868855 3'utr CG31694 FlyBase G5584.1 TTAAATTAACACTGCGATTGTTACGACTGGCATTTACGCTTTGCGATTTGGGTTAACCTCTTTTGTTGTTGATCTTTTTAAATTACAAGCGTAGGAAAACATAGTCTGCTTTAATGCTGCGAAAAAGTTATT 99 2868837 0.780898553 23 92 734 0.938650307 1.707570176 0.263803681 0.454545455 0.668711656 99 8 2 153 2L:2868724-2868855 7 40 296 FBgn0051694 1042 47.93 73.36 0.038387716 0.834550386 0.54525627 16 16 16 0.25 dme-miR-79-3p 7mer-m8 TAGCTTT 2L 2876816 2876822 + 2L_2876816_2876822_+ 0.620155594 0.612238416 0.616197005 0.005598306 CG8814 FBtr0077629 2876361 2877168 2L + 2876787 2876841 3'utr CG8814 FlyBase G1379.1 TCTTCGGTTACGGGCACGAGCTTGGTCTTTAGCTTTCTTCTATCCTAGAAAGCGC 27 2876810 0.732747655 7 27 259 1 1.505149978 0 0.148148148 0.28125 27 0 0 32 2L:2876787-2876841 7 CG8814 FBtr0077629 2876361 2877168 TAGCTTT 7mer-m8 dme-miR-79-3p 2L + 2876788 2876826 3'utr CG8814 FlyBase G1079.1 CTTCGGTTACGGGCACGAGCTTGGTCTTTAGCTTTCTTC 23 2876809 0.750623232 6 21 186 0.972222222 1.544068044 0.138888889 0.434782609 0.638888889 23 1 0 35 2L:2876788-2876826 7 23 297 FBgn0031478 361.3733333 24.66 37.60666667 0.063646091 0.932684509 0.611593689 6 7 6.5 0.25 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 2877098 2877105 - 2L_2877098_2877105_- 0.623202868 0.622869988 0.623036428 0.000235396 Prx6005 FBtr0077684 2877089 2877187 2L - 2877090 2877115 3'utr Prx6005 FlyBase G7126.1 CAATAAAGTATACGCTTACAACCGTA 8 2877105 0.758865998 2 6 28 0.916666667 1.041392685 0 0.25 0.5 8 1 0 11 2L:2877090-2877115 8 Prx6005 FBtr0077684 2877089 2877187 TACGCTTA 8mer-A1 dme-miR-965-3p 2L - 2877090 2877116 3'utr Prx6005 FlyBase G5590.1 ACAATAAAGTATACGCTTACAACCGTA 6 2877105 0.731785716 2 6 28 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2L:2877090-2877116 8 6 298 FBgn0031479 67.29333333 9.753333333 14.81333333 0.089161878 0.615174299 0.405040504 0 0 0 0.25 dme-bantam-3p 6mer3-8 TGATCT 2L 2880714 2880719 - 2L_2880714_2880719_- 0.965174986 0.987001865 0.976088426 0.015433949 NTPase FBtr0332459|FBtr0332460|FBtr0077683|FBtr0077682|FBtr0077680 2880702|2880702|2880703|2880702|2880702 2881227|2881227|2881227|2881227|2881227 2L - 2880701 2880737 5'utr-coding NTPase FlyBase G7128.1 AATAAATCAAATGTTAACTGATCTGAATTAAAGTAAA 9 2880710 0.701303948 5 8 69 0.888888889 0.903089987 0.111111111 0 0 9 1 0 8 2L:2880701-2880737 6 NTPase FBtr0077682|FBtr0077680|FBtr0332460|FBtr0077683|FBtr0332459 2880702|2880702|2880702|2880703|2880702 2881227|2881227|2881227|2881227|2881227 TGATCT 6mer3-8 dme-bantam-3p 2L - 2880702 2880729 5'utr-coding NTPase FlyBase G5592.1 AAATGTTAACTGATCTGAATTAAAGTAA 9 2880710 0.660348524 4 8 64 1 1.113943352 0.076923077 0.333333333 0.538461538 9 0 0 13 2L:2880702-2880729 6 9 299 FBgn0024947 993.2366667 56.17666667 85.57666667 0.009061284 0.160208865 0.105168854 -9 -9 -9 0.25 dme-miR-184-5p 8mer-A1 TGATAAGA 2L 2974707 2974714 + 2L_2974707_2974714_+ 0.592069211 0.39598489 0.494027051 0.138652538 gammaTub23C FBtr0077641 2974603 2974858 2L + 2974692 2974733 3'utr gammaTub23C FlyBase G1415.1 ATCCTTAAGTAGTAGTGATAAGACGATTGTTGGTATGACTCG 6 2974722 0.678962101 4 6 38 1 0.77815125 0.666666667 0 0 6 0 0 6 2L:2974692-2974733 8 gammaTub23C FBtr0077641 2974603 2974858 TGATAAGA 8mer-A1 dme-miR-184-5p 2L + 2974699 2974751 3'utr gammaTub23C FlyBase G1100.1 AGTAGTAGTGATAAGACGATTGTTGGTATGACTCGCATGTATGTAAACGCTGT 6 2974718 0.986652589 3 4 39 0.909090909 1 0.363636364 0.5 0.727272727 6 1 0 10 2L:2974699-2974751 8 5 300 FBgn0260639 328 21.35666667 32.38 0.015243902 0.234118932 0.154416306 -15 -11 -13 0.25 dme-miR-980-3p 6mer2-7 GCAGCT 2L 2974991 2974996 - 2L_2974991_2974996_- 0.998754767 0.933532007 0.966143387 0.046119484 CG9641 FBtr0077677|FBtr0077676 2974857|2974857 2975177|2975177 2L - 2974978 2975024 3'utr CG9641 FlyBase G7155.1 GACAACGGAACAAGGACAGCAGTATCGTGCAGCTTCACAAGTGAATT 6 2974997 0.937676622 3 5 21 1 0.903089987 0.625 0.333333333 0.5 6 0 0 8 2L:2974978-2975024 6 CG9641 FBtr0077677|FBtr0077676 2974857|2974857 2975177|2975177 GCAGCT 6mer2-7 dme-miR-980-3p 2L - 2974986 2975026 3'utr CG9641 FlyBase G5611.1 ATGACAACGGAACAAGGACAGCAGTATCGTGCAGCTTCACA 8 2975002 0.948118601 3 7 25 0.909090909 1 0.272727273 0.375 0.545454545 8 1 0 10 2L:2974986-2975026 6 5.5 301 FBgn0031483 465.01 30.09666667 46.35666667 0.011827703 0.18274449 0.118645287 1 6 3.5 0.25 dme-miR-980-3p 7mer-A1 GCAGCTA 2L 2980009 2980015 - 2L_2980009_2980015_- 0.57116301 0.467066922 0.519114966 0.073607058 Chd1 FBtr0331654|FBtr0305980|FBtr0077674 2979560|2979697|2979697 2980175|2980175|2980175 2L - 2979964 2980069 3'utr Chd1 FlyBase G7171.1 ACCCGCATACAGTACGTTAAGCGTAGCTCCATACACCTGTACAAGTAATTCCTAGCAGCTAACTATACTTCTATAAATGACTATACATCCGATCGCACAGAGGGCC 21 2980038 0.965034444 14 21 120 1 1.380211242 0 0.142857143 0.25 21 0 0 24 2L:2979964-2980069 7 Chd1 FBtr0331654|FBtr0305980|FBtr0077674 2979560|2979697|2979697 2980175|2980175|2980175 GCAGCTA 7mer-A1 dme-miR-980-3p 2L - 2979957 2980065 3'utr Chd1 FlyBase G5623.1 GCATACAGTACGTTAAGCGTAGCTCCATACACCTGTACAAGTAATTCCTAGCAGCTAACTATACTTCTATAAATGACTATACATCCGATCGCACAGAGGGCCGGCATTG 21 2980038 0.972356882 13 20 111 0.964285714 1.431363764 0.5 0.238095238 0.428571429 21 1 0 27 2L:2979957-2980065 7 6 302 FBgn0250786 1504.04 28.31666667 43.57333333 0.003989256 0.211889347 0.137698898 23 23 23 0.25 dme-miR-999-3p 7mer-A1 GTTAACA 2L 2989543 2989549 + 2L_2989543_2989549_+ 0.803586158 0.81026066 0.806923409 0.004719584 Bem46 FBtr0077643 2989510 2990075 2L + 2989522 2989560 3'utr Bem46 FlyBase G1427.1 ATCAAGTGTTCAATTGACTGTGTTAACACTGCGAATGGT 21 2989536 0.723940947 6 21 174 1 1.397940009 0.16 0.142857143 0.28 21 0 0 25 2L:2989522-2989560 7 Bem46 FBtr0077643 2989510 2990075 GTTAACA 7mer-A1 dme-miR-999-3p 2L + 2989516 2989552 3'utr Bem46 FlyBase G1112.1 GAATACATCAAGTGTTCAATTGACTGTGTTAACACTG 15 2989536 0.947763754 6 13 124 0.875 0.84509804 0.041666667 0.4 0.625 15 1 2 21 2L:2989516-2989552 7 18 303 FBgn0025109 189.0366667 13.54 20.76666667 0.095219622 1.329394387 0.866773676 7 7 7 0.25 dme-miR-33-5p 7mer-m1 AATGCAC 2L 2998420 2998426 + 2L_2998420_2998426_+ 0.707802262 0.673521912 0.690662087 0.024239903 CG3558 FBtr0331653|FBtr0077644|FBtr0273230|FBtr0077645 2998247|2998247|2998247|2998247 2998726|2998726|2998726|2998726 2L + 2998407 2998443 3'utr CG3558 FlyBase G1447.1 AGATTTACAAGTTAATGCACACGGACTCAACTAAAAA 6 2998422 0.877258049 3 6 24 1 0.77815125 0 0 0 6 0 0 6 2L:2998407-2998443 7 CG3558 FBtr0273230|FBtr0077645|FBtr0331653|FBtr0077644 2998247|2998247|2998247|2998247 2998726|2998726|2998726|2998726 AATGCAC 7mer-m1 dme-miR-33-5p 2L + 2998383 2998438 3'utr CG3558 FlyBase G1128.1 TTAACGAACAATGCAGTTTTGAACAGATTTACAAGTTAATGCACACGGACTCAACT 11 2998421 0.886031998 7 11 49 1 1.301029996 0.05 0.545454545 0.75 11 0 0 20 2L:2998383-2998438 7 7 304 FBgn0025681 2409.06 69.7 106.8566667 0.002905698 0.100430416 0.065508313 -2 -1 -1.5 0.25 dme-miR-317-3p 7mer-A1 GTGTTCA 2L 2998524 2998530 + 2L_2998524_2998530_+ 0.82022945 0.822386143 0.821307797 0.001524946 CG3558 FBtr0331653|FBtr0077644|FBtr0273230|FBtr0077645 2998247|2998247|2998247|2998247 2998726|2998726|2998726|2998726 2L + 2998465 2998535 3'utr CG3558 FlyBase G1448.1 GCGTTAAACAAATAGATTTAGGTTAAATGTTTTAAGTGAATCGGGACGGTGGATCTTAAGTGTTCAGATGT 17 2998520 0.981275975 8 12 134 0.761904762 0.726998728 0.666666667 0.176470588 0.333333333 17 3 2 16 2L:2998465-2998535 7 CG3558 FBtr0273230|FBtr0077645|FBtr0331653|FBtr0077644 2998247|2998247|2998247|2998247 2998726|2998726|2998726|2998726 GTGTTCA 7mer-A1 dme-miR-317-3p 2L + 2998474 2998546 3'utr CG3558 FlyBase G1129.1 AAATAGATTTAGGTTAAATGTTTTAAGTGAATCGGGACGGTGGATCTTAAGTGTTCAGATGTAAACAAATATT 16 2998519 0.980150922 9 15 106 0.954545455 1.322219295 0.590909091 0.3125 0.5 16 1 0 21 2L:2998474-2998546 7 11.5 305 FBgn0025681 2409.06 69.7 106.8566667 0.004773646 0.164992826 0.1076208 4 5 4.5 0.25 dme-miR-8-3p 7mer-A1 AGTATTA 2L 2998696 2998702 + 2L_2998696_2998702_+ 0.697392912 0.556526988 0.62695995 0.099607233 CG3558 FBtr0331653|FBtr0077644|FBtr0273230|FBtr0077645 2998247|2998247|2998247|2998247 2998726|2998726|2998726|2998726 2L + 2998678 2998732 3'utr CG3558 FlyBase G1449.1 ATGTAAAGCCAACTTGAAAGTATTAAATTGGTCCAAGTAAATGCACAGCCAAGAA 15 2998691 0.959410576 6 15 77 1 1.230448921 0.235294118 0.133333333 0.235294118 15 0 0 17 2L:2998678-2998732 7 CG3558 FBtr0273230|FBtr0077645|FBtr0331653|FBtr0077644 2998247|2998247|2998247|2998247 2998726|2998726|2998726|2998726 AGTATTA 7mer-A1 dme-miR-8-3p 2L + 2998678 2998706 3'utr CG3558 FlyBase G1130.1 ATGTAAAGCCAACTTGAAAGTATTAAATT 6 2998691 0.835623903 3 6 41 1 0.77815125 0 0 0 6 0 0 6 2L:2998678-2998706 7 8.5 306 FBgn0025681 2409.06 69.7 106.8566667 0.003528347 0.12195122 0.079545809 5 5 5 0.25 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 3021310 3021315 + 2L_3021310_3021315_+ 0.328180237 0.399090649 0.363635443 0.050141225 CG17264 FBtr0331628|FBtr0077647 3021226|3021226 3021506|3021506 2L + 3021268 3021328 3'utr CG17264 FlyBase G1457.1 TTATTTTTCAATTATCGAAATAGAGTTAAGATACTGTGTTTGTGATGACTTAAATACTTCT 133 3021307 0.777493441 12 125 1318 0.937888199 1.701855693 0.049689441 0.165413534 0.310559006 133 8 2 151 2L:3021268-3021328 6 CG17264 FBtr0077647|FBtr0331628 3021226|3021226 3021506|3021506 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L + 3021271 3021375 3'utr CG17264 FlyBase G1132.1 TTTTTCAATTATCGAAATAGAGTTAAGATACTGTGTTTGTGATGACTTAAATACTTCTATTTTATTTGTAGGTTGATAGTAACATTCCCTGGATAAATAGTATGT 91 3021307 0.894286967 17 84 825 0.919117647 1.096910013 0.058823529 0.32967033 0.551470588 91 2 9 125 2L:3021271-3021375 6 96.5 307 FBgn0031490 217.3433333 9.67 14.60333333 0.443997976 9.979317477 6.608080347 3 3 3 0.25 dme-miR-8-3p 6mer2-7 AGTATT 2L 3021432 3021437 + 2L_3021432_3021437_+ 0.998223381 0.995398198 0.99681079 0.001997718 CG17264 FBtr0331628|FBtr0077647 3021226|3021226 3021506|3021506 2L + 3021412 3021446 3'utr CG17264 FlyBase G1459.1 AAACTACAATGATTCAAAATAGTATTCTAAGCGAC 13 3021432 0.90615954 4 12 78 0.933333333 0.84509804 0.733333333 0.153846154 0.266666667 13 0 1 14 2L:3021412-3021446 6 CG17264 FBtr0077647|FBtr0331628 3021226|3021226 3021506|3021506 AGTATT 6mer2-7 dme-miR-8-3p 2L + 3021416 3021445 3'utr CG17264 FlyBase G1133.1 TACAATGATTCAAAATAGTATTCTAAGCGA 6 3021432 0.712939716 4 5 36 0.777777778 0.84509804 0.222222222 0.5 0.666666667 6 2 0 7 2L:3021416-3021445 6 8.5 308 FBgn0031490 217.3433333 9.67 14.60333333 0.03910863 0.879007239 0.582058891 0 0 0 0.25 dme-miR-79-3p 6mer3-8 TAGCTT 2L 302727 302732 + 2L_302727_302732_+ 0.999924751 0.972174536 0.986049644 0.019622425 Pi3K21B FBtr0331206|FBtr0331207|FBtr0331208|FBtr0331205 302658|302658|302658|302658 305233|305233|305233|303934 2L + 302653 302765 stop_codon Pi3K21B FlyBase G695.1 GCAGTAGGAGCCGCACATCAAATTGCCGCTAAACGAGCCCTCAACCTCAGGCTAGCTATCTATCTCTCTAATTCTAGCTTGCTCTAAAGCCCTAACTCTCTCTAACTCTAGAT 36 302699 0.976526844 18 35 229 0.976190476 1.612783857 0.119047619 0.138888889 0.261904762 36 1 0 41 2L:302653-302765 6 Pi3K21B FBtr0331205|FBtr0331208|FBtr0331207|FBtr0331206 302658|302658|302658|302658 303934|305233|305233|305233 TAGCTT 6mer3-8 dme-miR-79-3p 2L + 302658 302767 stop_codon Pi3K21B FlyBase G558.1 AGGAGCCGCACATCAAATTGCCGCTAAACGAGCCCTCAACCTCAGGCTAGCTATCTATCTCTCTAATTCTAGCTTGCTCTAAAGCCCTAACTCTCTCTAACTCTAGATAT 29 302705 0.982144712 11 24 172 0.833333333 1.602059991 0.083333333 0.413793103 0.645833333 29 8 0 40 2L:302658-302767 6 4 309 FBgn0020622 2718.376667 71.30333333 109.6833333 0.001471466 0.056098359 0.036468622 28 22 25 0.25 dme-miR-8-3p 6mer3-8 CAGTAT 2L 302832 302837 + 2L_302832_302837_+ 0.997607919 0.687285207 0.842446563 0.219431286 Pi3K21B FBtr0331206|FBtr0331207|FBtr0331208|FBtr0331205 302658|302658|302658|302658 305233|305233|305233|303934 2L + 302797 302837 3'utr Pi3K21B FlyBase G696.1 TGCAGGCTCTGTCAAAAGGCTTAAGCTGGATATGCCAGTAT 9 302805 0.746797221 6 8 53 1 0.954242509 0.555555556 0 0 9 0 0 9 2L:302797-302837 6 Pi3K21B FBtr0331205|FBtr0331208|FBtr0331207|FBtr0331206 302658|302658|302658|302658 303934|305233|305233|305233 CAGTAT 6mer3-8 dme-miR-8-3p 2L + 302797 302837 3'utr Pi3K21B FlyBase G559.1 TGCAGGCTCTGTCAAAAGGCTTAAGCTGGATATGCCAGTAT 8 302828 0.75013305 5 8 48 1 1.113943352 0.153846154 0.5 0.692307692 8 0 0 13 2L:302797-302837 6 4.5 310 FBgn0020622 2718.376667 71.30333333 109.6833333 0.0016554 0.063110654 0.0410272 27 4 15.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2L 303748 303753 + 2L_303748_303753_+ 0.695245616 0.727653783 0.7114497 0.022916058 Pi3K21B FBtr0331206|FBtr0331206|FBtr0331206|FBtr0331207|FBtr0331207|FBtr0331207|FBtr0331208|FBtr0331208|FBtr0331208|FBtr0331205|FBtr0331205|FBtr0331205 302658|302658|302658|302658|302658|302658|302658|302658|302658|302658|302658|302658 305233|305233|305233|305233|305233|305233|305233|305233|305233|303934|303934|303934 2L + 303691 303792 3'utr Pi3K21B FlyBase G701.2 GTTATATTATAACTGATTTAAAGTAGTTTTAAGTGAAATCTACGTACGTTTACTCGATGTGATCAGTTGATTGTTGCTAACGTTAATTTTCCTTCAATTTTT 34 303741 0.719943953 16 30 334 0.909090909 1.124938737 0.295454545 0.264705882 0.431818182 34 2 2 40 2L:303691-303792 6 Pi3K21B FBtr0331205|FBtr0331205|FBtr0331205|FBtr0331208|FBtr0331208|FBtr0331208|FBtr0331207|FBtr0331207|FBtr0331207|FBtr0331206|FBtr0331206|FBtr0331206 302658|302658|302658|302658|302658|302658|302658|302658|302658|302658|302658|302658 303934|303934|303934|305233|305233|305233|305233|305233|305233|305233|305233|305233 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 303736 303790 3'utr Pi3K21B FlyBase G568.1 ACGTTTACTCGATGTGATCAGTTGATTGTTGCTAACGTTAATTTTCCTTCAATTT 14 303745 0.989052646 8 13 122 0.9375 1.176091259 0.5 0.142857143 0.25 14 1 0 15 2L:303736-303790 6 17 311 FBgn0020622 2718.376667 71.30333333 109.6833333 0.006253732 0.238418026 0.154991643 7 3 5 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2L 304490 304495 + 2L_304490_304495_+ 0.556066552 0.944619594 0.750343073 0.274748461 Pi3K21B FBtr0331206|FBtr0331207|FBtr0331208 302658|302658|302658 305233|305233|305233 2L + 304332 304626 3'utr Pi3K21B FlyBase G704.1 CTTCGTAAGCGTGTTGAAAGAATGTTGACCTTTCTGTTTGCATTCTCCCTATTGAATTTGAGCGATCCACTTACTAGCACACACAAAAACTGTCGCGTCTTTAAGATATTCTTACATATATAAATTCGATGTATTCATTATACTGTATCTGCATACTTTACCTGTAATTCCTAATTTAACTTATTTAACTTGTAATTTGTGTGTTTCATTTTGCTTAAATTCTATGAGATTTTGGCGGATCTCGTACGTTGTAGTATTTATAAGTTTTAAATTTAGTTTGTAAAATGCGTTTCAA 146 304488 0.989493447 46 141 1371 0.960227273 1.926856709 0.159090909 0.164383562 0.306818182 146 6 1 169 2L:304332-304626 6 Pi3K21B FBtr0331208|FBtr0331207|FBtr0331206 302658|302658|302658 305233|305233|305233 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2L + 304421 304503 3'utr Pi3K21B FlyBase G569.1 CTGTCGCGTCTTTAAGATATTCTTACATATATAAATTCGATGTATTCATTATACTGTATCTGCATACTTTACCTGTAATTCCT 33 304489 0.988718234 10 32 306 0.978723404 1.361727836 0.063829787 0.303030303 0.510638298 33 0 1 46 2L:304421-304503 6 36 312 FBgn0020622 2718.376667 71.30333333 109.6833333 0.013243198 0.504885232 0.328217596 2 1 1.5 0.25 dme-miR-304-5p 7mer-m8 TGAGATT 2L 304556 304562 + 2L_304556_304562_+ 0.581794531 0.613512573 0.597653552 0.022428084 Pi3K21B FBtr0331206|FBtr0331207|FBtr0331208 302658|302658|302658 305233|305233|305233 2L + 304332 304626 3'utr Pi3K21B FlyBase G704.1 CTTCGTAAGCGTGTTGAAAGAATGTTGACCTTTCTGTTTGCATTCTCCCTATTGAATTTGAGCGATCCACTTACTAGCACACACAAAAACTGTCGCGTCTTTAAGATATTCTTACATATATAAATTCGATGTATTCATTATACTGTATCTGCATACTTTACCTGTAATTCCTAATTTAACTTATTTAACTTGTAATTTGTGTGTTTCATTTTGCTTAAATTCTATGAGATTTTGGCGGATCTCGTACGTTGTAGTATTTATAAGTTTTAAATTTAGTTTGTAAAATGCGTTTCAA 146 304563 0.989493447 46 141 1371 0.960227273 1.926856709 0.159090909 0.164383562 0.306818182 146 6 1 169 2L:304332-304626 7 Pi3K21B FBtr0331208|FBtr0331207|FBtr0331206 302658|302658|302658 305233|305233|305233 TGAGATT 7mer-m8 dme-miR-304-5p 2L + 304517 304610 3'utr Pi3K21B FlyBase G570.1 TAACTTGTAATTTGTGTGTTTCATTTTGCTTAAATTCTATGAGATTTTGGCGGATCTCGTACGTTGTAGTATTTATAAGTTTTAAATTTAGTTT 73 304563 0.69179169 20 68 661 0.919191919 1.658011397 0.272727273 0.273972603 0.464646465 73 7 1 91 2L:304517-304610 7 54 313 FBgn0020622 2718.376667 71.30333333 109.6833333 0.019864797 0.757327848 0.492326394 -7 -7 -7 0.25 dme-miR-263a-5p 7mer-A1 TGCCATA 2L 304774 304780 + 2L_304774_304780_+ 0.486555579 0.765365399 0.625960489 0.1971483 Pi3K21B FBtr0331206|FBtr0331207|FBtr0331208 302658|302658|302658 305233|305233|305233 2L + 304745 304810 3'utr Pi3K21B FlyBase G705.2 TGTTTGCTAACTGATAGATGATGACTTTTTGCCATACCTAAATGTTAAATGGAAATATTTGTGAAT 43 304772 0.636625074 15 35 275 0.903846154 1.672097858 0.173076923 0.238095238 0.384615385 42 5 0 47 2L:304745-304810 7 Pi3K21B FBtr0331208|FBtr0331207|FBtr0331206 302658|302658|302658 305233|305233|305233 TGCCATA 7mer-A1 dme-miR-263a-5p 2L + 304736 304779 3'utr Pi3K21B FlyBase G571.1 TGTCAATAATGTTTGCTAACTGATAGATGATGACTTTTTGCCAT 13 304772 0.928410656 5 13 99 1 1.361727836 0.217391304 0.538461538 0.739130435 13 0 0 23 2L:304736-304779 6 13 314 FBgn0020622 2718.376667 71.30333333 109.6833333 0.004782266 0.182319667 0.118523021 2 2 2 0.25 dme-miR-1007-3p 6mer3-8 TGAGCT 2L 3067672 3067677 + 2L_3067672_3067677_+ 0.818450874 0.51058528 0.664518077 0.217693853 CG3523 FBtr0077659|FBtr0335387 3067501|3067501 3068177|3068177 2L + 3067555 3067688 3'utr CG3523 FlyBase G1510.1 CACACGATCATCACCCTCTCACCGTCACTCACCCAATACTCGGGTTCTATGCACCATGTGGAACCACGGAACACATCGACACCTAGTTAGCATACTTAGTGAATGAATTTACGTTGTTGAGCTGCAAGGAATGG 130 3067671 0.778646916 26 119 768 0.917721519 1.860338007 0.462025316 0.169230769 0.316455696 130 12 1 145 2L:3067555-3067688 6 CG3523 FBtr0077659|FBtr0335387 3067501|3067501 3068177|3068177 TGAGCT 6mer3-8 dme-miR-1007-3p 2L + 3067591 3067689 3'utr CG3523 FlyBase G1189.1 TACTCGGGTTCTATGCACCATGTGGAACCACGGAACACATCGACACCTAGTTAGCATACTTAGTGAATGAATTTACGTTGTTGAGCTGCAAGGAATGGC 101 3067670 0.777651789 18 92 615 0.926666667 1.36486355 0.48 0.366336634 0.573333333 101 6 5 139 2L:3067591-3067689 6 51.5 315 FBgn0027571 21016.13 290.6166667 443.8066667 0.002450499 0.177209382 0.11604152 1 2 1.5 0.25 dme-bantam-3p 6mer3-8 TGATCT 2L 3146647 3146652 - 2L_3146647_3146652_- 0.700027889 0.999654912 0.8498414 0.211868284 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 2L - 3146626 3146721 3'utr Mad FlyBase G7252.1 ACAAGAAAAGATACCAGCGAAATTTAAGAATGGAAAAATGCTACTGAATCAATACGTTTTCCCAGACAATGATCTTTTGTTATCTTAAGTAAAACT 178 3146652 0.950769641 8 175 1917 0.985294118 2.002166062 0.191176471 0.129213483 0.240196078 178 2 1 201 2L:3146626-3146721 6 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 TGATCT 6mer3-8 dme-bantam-3p 2L - 3146580 3146719 3'utr Mad FlyBase G5672.1 AAGAAAAGATACCAGCGAAATTTAAGAATGGAAAAATGCTACTGAATCAATACGTTTTCCCAGACAATGATCTTTTGTTATCTTAAGTAAAACTAATATTGTTTAGACCACGAGAAAATTGCCTTTTTATATAAATATAC 152 3146651 0.999995364 13 148 1524 0.981981982 2.037426498 0.256756757 0.322368421 0.536036036 152 3 1 218 2L:3146580-3146719 6 145.5 316 FBgn0011648 490.6766667 21.49 32.97333333 0.296529283 6.770590973 4.412656692 0 -1 -0.5 0.25 dme-miR-980-3p 8mer-A1 GGCAGCTA 2L 3147213 3147220 - 2L_3147213_3147220_- 0.668331118 0.594919748 0.631625433 0.051909699 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 2L - 3147182 3147243 3'utr Mad FlyBase G7255.1 GCAGATTTATATAGATGATGTACGGCAGCTACTCCAATACCCGCCCTTTGCCCATATTTTAT 71 3147227 0.718320133 9 68 366 0.962962963 1.892094603 0.209876543 0.14084507 0.24691358 71 3 0 78 2L:3147182-3147243 8 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 GGCAGCTA 8mer-A1 dme-miR-980-3p 2L - 3147149 3147239 3'utr Mad FlyBase G5675.1 ATTTATATAGATGATGTACGGCAGCTACTCCAATACCCGCCCTTTGCCCATATTTTATAGTTTATCGTATGATTTTCTATGCGAATGTCAT 46 3147227 0.969233548 12 44 259 0.971428571 1.832508913 0.285714286 0.347826087 0.571428571 46 2 0 68 2L:3147149-3147239 8 54 317 FBgn0011648 490.6766667 21.49 32.97333333 0.110052105 2.51279665 1.63768702 7 7 7 0.25 dme-miR-2a-2-5p 7mer-m1 GATGAGG 2L 3147406 3147412 - 2L_3147406_3147412_- 0.815490422 0.819070454 0.817280438 0.002531513 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 2L - 3147378 3147481 stop_codon Mad FlyBase G7257.1 TGGCTGGACAAGGTGCTCACCCAAATGGGCTCTCCGCATAATGCAATTAGTTCGGTATCCTAAGCTTAAGATGAGGCTCGAGTCCTCAATGGAGACGGAAGAGA 24 3147410 0.967203984 9 23 127 0.965517241 1.146128036 0.172413793 0.208333333 0.344827586 24 0 1 28 2L:3147378-3147481 7 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 GATGAGG 7mer-m1 dme-miR-2a-2-5p 2L - 3147351 3147459 stop_codon Mad FlyBase G5677.1 AAATGGGCTCTCCGCATAATGCAATTAGTTCGGTATCCTAAGCTTAAGATGAGGCTCGAGTCCTCAATGGAGACGGAAGAGAAGGAACACAAAACCGGTAGCTAAATGA 19 3147410 0.994928317 8 18 109 0.942857143 1.51851394 0.2 0.578947368 0.771428571 19 2 0 33 2L:3147351-3147459 7 9 318 FBgn0011648 490.6766667 21.49 32.97333333 0.018342017 0.418799442 0.272947837 -2 -2 -2 0.25 dme-miR-307a-3p 6mer3-8 GGTTGT 2L 3168259 3168264 + 2L_3168259_3168264_+ 0.965629893 0.986079553 0.975854723 0.014460122 Hydr2 FBtr0332371|FBtr0077576|FBtr0308315 3168200|3168200|3168200 3168988|3168988|3169462 2L + 3168216 3168275 3'utr Hydr2 FlyBase G1531.1 TTCACACGCATACACGACTATTTAACGCTTCTGTGTCAAAATTGGTTGTCGCTGTCGAAT 30 3168258 0.985161205 8 29 235 0.972222222 1.544068044 0.5 0.133333333 0.277777778 30 1 0 35 2L:3168216-3168275 6 Hydr2 FBtr0308315|FBtr0077576|FBtr0332371 3168200|3168200|3168200 3169462|3168988|3168988 GGTTGT 6mer3-8 dme-miR-307a-3p 2L + 3168222 3168365 3'utr Hydr2 FlyBase G1204.1 CGCATACACGACTATTTAACGCTTCTGTGTCAAAATTGGTTGTCGCTGTCGAATATAAATCTTTGAAGAACCATCGGAACGGAAGAGAGCCCGAAAGACCCCATACATATAGTTCTAACATATGATATCGTTGTGCAGCAATTA 33 3168258 0.980669903 16 32 232 0.94 1.672097858 0.46 0.363636364 0.58 33 3 0 47 2L:3168222-3168365 6 14 319 FBgn0014906 1672.66 89.72666667 137.1866667 0.008369902 0.156029423 0.102050734 1 1 1 0.25 dme-miR-283-5p 6mer3-8 TGATAT 2L 3168344 3168349 + 2L_3168344_3168349_+ 0.895547904 0.868923127 0.882235516 0.018826577 Hydr2 FBtr0332371|FBtr0077576|FBtr0308315 3168200|3168200|3168200 3168988|3168988|3169462 2L + 3168295 3168389 3'utr Hydr2 FlyBase G1532.1 TCGGAACGGAAGAGAGCCCGAAAGACCCCATACATATAGTTCTAACATATGATATCGTTGTGCAGCAATTATAAATTATCAGCCGCGCAAGCATA 19 3168344 0.978478789 10 19 126 1 1.447158031 0.071428571 0.368421053 0.571428571 19 0 0 28 2L:3168295-3168389 6 Hydr2 FBtr0308315|FBtr0077576|FBtr0332371 3168200|3168200|3168200 3169462|3168988|3168988 TGATAT 6mer3-8 dme-miR-283-5p 2L + 3168222 3168365 3'utr Hydr2 FlyBase G1204.1 CGCATACACGACTATTTAACGCTTCTGTGTCAAAATTGGTTGTCGCTGTCGAATATAAATCTTTGAAGAACCATCGGAACGGAAGAGAGCCCGAAAGACCCCATACATATAGTTCTAACATATGATATCGTTGTGCAGCAATTA 33 3168351 0.980669903 16 32 232 0.94 1.672097858 0.46 0.363636364 0.58 33 3 0 47 2L:3168222-3168365 6 13 320 FBgn0014906 1672.66 89.72666667 137.1866667 0.007772052 0.144884464 0.094761396 0 -7 -3.5 0.25 dme-miR-999-3p 7mer-m8 AGTTAAC 2L 3168520 3168526 + 2L_3168520_3168526_+ 0.5135952 0.535638874 0.524617037 0.01558725 Hydr2 FBtr0332371|FBtr0077576|FBtr0308315 3168200|3168200|3168200 3168988|3168988|3169462 2L + 3168484 3168563 3'utr Hydr2 FlyBase G1533.2 AACATACAATGTATCAGTTGAACTCGTACCTTAGTTAGTTAACGCGACCACATGTATCCATGTACTTATGTCTAAGCAAA 91 3168518 0.772219073 15 84 750 0.946902655 1.728353782 0.17699115 0.131868132 0.300884956 91 5 1 107 2L:3168484-3168563 7 Hydr2 FBtr0308315|FBtr0077576|FBtr0332371 3168200|3168200|3168200 3169462|3168988|3168988 AGTTAAC 7mer-m8 dme-miR-999-3p 2L + 3168444 3168561 3'utr Hydr2 FlyBase G1205.1 GAACGATTTTTATGCTTTTTAATGACTTTTTGAAGAGCCAAACATACAATGTATCAGTTGAACTCGTACCTTAGTTAGTTAACGCGACCACATGTATCCATGTACTTATGTCTAAGCA 56 3168517 0.985954201 15 52 438 0.91011236 1.063386979 0.101123596 0.339285714 0.584269663 56 2 6 81 2L:3168444-3168561 7 44.5 321 FBgn0014906 1672.66 89.72666667 137.1866667 0.026604331 0.495950665 0.324375547 2 3 2.5 0.25 dme-bantam-3p 6mer3-8 TGATCT 2L 3359554 3359559 - 2L_3359554_3359559_- 0.907434246 0.709081207 0.808257727 0.140256751 CG34394 FBtr0332409|FBtr0306333|FBtr0306335|FBtr0112638|FBtr0112641|FBtr0112639 3358638|3358638|3358638|3358638|3358638|3358638 3360717|3360717|3360717|3360717|3360717|3360717 2L - 3359525 3359578 3'utr CG34394 FlyBase G7275.1 GGTAAGAAAAGCGCGTGTATGATCTAAGTAGCTGCATTTTAGTTAGACTAGAGC 13 3359561 0.980829675 6 11 77 0.923076923 1.079181246 0.461538462 0 0 13 1 0 12 2L:3359525-3359578 6 CG34394 FBtr0112638|FBtr0306335|FBtr0306333|FBtr0332409|FBtr0112639|FBtr0112641 3358638|3358638|3358638|3358638|3358638|3358638 3360717|3360717|3360717|3360717|3360717|3360717 TGATCT 6mer3-8 dme-bantam-3p 2L - 3359526 3359586 3'utr CG34394 FlyBase G5688.1 GTTTTAATGGTAAGAAAAGCGCGTGTATGATCTAAGTAGCTGCATTTTAGTTAGACTAGAG 14 3359560 0.717420369 5 13 94 0.941176471 0.903089987 0.294117647 0.214285714 0.352941176 14 0 1 16 2L:3359526-3359586 6 10 322 FBgn0085423 1284.263333 25.49333333 39.12 0.007786565 0.392259414 0.255623722 2 1 1.5 0.25 dme-miR-317-5p 8mer-A1 GTATCCCA 2L 3360255 3360262 - 2L_3360255_3360262_- 0.626122774 0.543755077 0.584938926 0.058242759 CG34394 FBtr0332409|FBtr0306333|FBtr0306335|FBtr0112638|FBtr0112641|FBtr0112639 3358638|3358638|3358638|3358638|3358638|3358638 3360717|3360717|3360717|3360717|3360717|3360717 2L - 3360240 3360304 3'utr CG34394 FlyBase G7281.2 ATCCTCTGACACTGAATGTTAAGGTTAATGTTGAAAATTCATGTATCCCAATCAAGGTTTAACCT 11 3360246 0.789631528 5 9 69 0.785714286 1.041392685 0.142857143 0.181818182 0.357142857 11 3 0 11 2L:3360240-3360304 8 CG34394 FBtr0112638|FBtr0306335|FBtr0306333|FBtr0332409|FBtr0112639|FBtr0112641 3358638|3358638|3358638|3358638|3358638|3358638 3360717|3360717|3360717|3360717|3360717|3360717 GTATCCCA 8mer-A1 dme-miR-317-5p 2L - 3360239 3360291 3'utr CG34394 FlyBase G5692.1 GAATGTTAAGGTTAATGTTGAAAATTCATGTATCCCAATCAAGGTTTAACCTA 10 3360246 0.977205411 3 9 61 1 1.146128036 0.142857143 0.3 0.5 10 0 0 14 2L:3360239-3360291 8 7 323 FBgn0085423 1284.263333 25.49333333 39.12 0.005450596 0.27458159 0.178936605 -16 -16 -16 0.25 dme-bantam-3p 7mer-m8 TGATCTC 2L 3360367 3360373 - 2L_3360367_3360373_- 0.656325831 0.657994131 0.657159981 0.001179666 CG34394 FBtr0332409|FBtr0306333|FBtr0306335|FBtr0112638|FBtr0112641|FBtr0112639 3358638|3358638|3358638|3358638|3358638|3358638 3360717|3360717|3360717|3360717|3360717|3360717 2L - 3360306 3360421 3'utr CG34394 FlyBase G7282.1 AGGTCTGATAGTTTTGAAACGCACTGCACCAGCGGGCATTTGTTACTTTGATCTCCTAGTTAGCAATACACAAAACCCAAACTTGTGCATGTTCTATTCTCTCGGATTAAGATACA 496 3360374 0.807763879 18 476 5025 0.961148649 2.056142262 0.336148649 0.157258065 0.293918919 496 19 4 569 2L:3360306-3360421 7 CG34394 FBtr0112638|FBtr0306335|FBtr0306333|FBtr0332409|FBtr0112639|FBtr0112641 3358638|3358638|3358638|3358638|3358638|3358638 3360717|3360717|3360717|3360717|3360717|3360717 TGATCTC 7mer-m8 dme-bantam-3p 2L - 3360345 3360423 3'utr CG34394 FlyBase G5693.1 AAAGGTCTGATAGTTTTGAAACGCACTGCACCAGCGGGCATTTGTTACTTTGATCTCCTAGTTAGCAATACACAAAACC 266 3360374 0.720383739 16 249 2609 0.938931298 1.721928326 0.361323155 0.342105263 0.554707379 266 18 6 369 2L:3360345-3360423 7 367 324 FBgn0085423 1284.263333 25.49333333 39.12 0.285766938 14.3959205 9.381390593 1 1 1 0.25 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 3405151 3405157 - 2L_3405151_3405157_- 0.654490273 0.655574424 0.655032349 0.000766574 pgant2 FBtr0077592|FBtr0303992 3404458|3404458 3405576|3405576 2L - 3405145 3405180 3'utr pgant2 FlyBase G7299.1 ACTGTAACCCTAATGCAACCTTTGGCAGCTGATTAA 63 3405158 0.75787803 3 62 395 0.975308642 1.897627091 0.086419753 0.19047619 0.37037037 63 2 0 79 2L:3405145-3405180 7 pgant2 FBtr0077592|FBtr0303992 3404458|3404458 3405576|3405576 GGCAGCT 7mer-m8 dme-miR-980-3p 2L - 3405145 3405181 3'utr pgant2 FlyBase G5706.1 TACTGTAACCCTAATGCAACCTTTGGCAGCTGATTAA 60 3405158 0.740495215 5 59 373 0.978021978 1.949390007 0.131868132 0.366666667 0.582417582 60 2 0 89 2L:3405145-3405181 7 61.5 325 FBgn0031530 60.33333333 2.156666667 3.27 1.019337017 28.51622875 18.80733945 1 1 1 0.25 dme-miR-965-3p 7mer-m8 TACGCTT 2L 3453778 3453784 - 2L_3453778_3453784_- 0.619156117 0.620203756 0.619679937 0.000740836 Cog3 FBtr0077573 3453695 3453922 2L - 3453757 3453799 3'utr Cog3 FlyBase G7302.1 GTGTTAAAAACTATCTACGCTTTCCAAATGTAGACTTAACATT 14 3453784 0.751685691 4 12 103 0.875 0.84509804 0.375 0.142857143 0.25 14 1 1 14 2L:3453757-3453799 7 Cog3 FBtr0077573 3453695 3453922 TACGCTT 7mer-m8 dme-miR-965-3p 2L - 3453748 3453806 3'utr Cog3 FlyBase G5709.1 AAGATCCGTGTTAAAAACTATCTACGCTTTCCAAATGTAGACTTAACATTAATTTATTT 13 3453784 0.745647707 7 10 101 0.842105263 1.204119983 0.315789474 0.384615385 0.578947368 13 3 0 16 2L:3453748-3453806 7 11 326 FBgn0031536 124 5.03 7.693333333 0.088709677 2.186878728 1.429809359 0 0 0 0.25 dme-miR-8-3p 7mer-m8 CAGTATT 2L 345528 345534 + 2L_345528_345534_+ 0.57565282 0.630039281 0.602846051 0.038457063 Plc21C FBtr0078049|FBtr0078050|FBtr0330674|FBtr0078047|FBtr0330673|FBtr0078048 345447|345447|345447|345447|345447|345447 355566|347927|346255|346255|346255|346541 2L + 345515 345564 3'utr Plc21C FlyBase G717.1 AGTTGTTAGTCTTCAGTATTTACAGCAGAAACATAGGAATGAAAAGTCTT 12 345527 0.994932734 5 11 76 0.933333333 1.146128036 0.2 0.25 0.4 12 1 0 14 2L:345515-345564 7 Plc21C FBtr0330673|FBtr0078048|FBtr0330674|FBtr0078047|FBtr0078049|FBtr0078050 345447|345447|345447|345447|345447|345447 346255|346541|346255|346255|355566|347927 CAGTATT 7mer-m8 dme-miR-8-3p 2L + 345491 345555 3'utr Plc21C FlyBase G579.1 CCCTAGGATTAATTGTGGTTCTAAAGTTGTTAGTCTTCAGTATTTACAGCAGAAACATAGGAATG 9 345526 0.989069386 6 8 50 0.923076923 1.079181246 0.461538462 0.222222222 0.461538462 9 1 0 12 2L:345491-345555 7 7.5 327 FBgn0004611 260.3233333 5.52 8.483333333 0.028810326 1.358695652 0.884086444 1 2 1.5 0.25 dme-miR-307a-3p 7mer-m8 GGTTGTG 2L 346001 346007 + 2L_346001_346007_+ 0.550337668 0.694241014 0.622289341 0.101754999 Plc21C FBtr0078049|FBtr0078050|FBtr0330674|FBtr0078047|FBtr0330673|FBtr0078048 345447|345447|345447|345447|345447|345447 355566|347927|346255|346255|346255|346541 2L + 345963 346020 3'utr Plc21C FlyBase G719.1 AAGGAGACTGAGTGCTCCATTTGTCTAATGCTAATTGTGGTTGTGTGTATTTTACATC 26 345999 0.991496352 7 26 279 1 1.505149978 0.09375 0.192307692 0.34375 26 0 0 32 2L:345963-346020 7 Plc21C FBtr0330673|FBtr0078048|FBtr0330674|FBtr0078047|FBtr0078049|FBtr0078050 345447|345447|345447|345447|345447|345447 346255|346541|346255|346255|355566|347927 GGTTGTG 7mer-m8 dme-miR-307a-3p 2L + 345983 346022 3'utr Plc21C FlyBase G581.1 TTGTCTAATGCTAATTGTGGTTGTGTGTATTTTACATCAG 16 346001 0.701867721 5 15 177 0.964285714 1.431363764 0.321428571 0.5 0.714285714 16 1 0 27 2L:345983-346022 7 20.5 328 FBgn0004611 260.3233333 5.52 8.483333333 0.078748223 3.713768116 2.416502947 2 0 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 3462415 3462420 - 2L_3462415_3462420_- 0.690003439 0.6854007 0.68770207 0.0032546 msl-2 FBtr0077571|FBtr0077571|FBtr0077571|FBtr0077570|FBtr0077570|FBtr0077570 3462216|3462216|3462216|3462216|3462216|3462216 3463265|3463265|3463265|3463265|3463265|3463265 2L - 3462400 3462446 3'utr msl-2 FlyBase G7309.1 AGATTGCTTTGCCCAAAATGTGGATGCTGTGAGCTAAAAAAAACCTT 15 3462422 0.9208458 6 13 86 0.9375 0.875061263 0.375 0.066666667 0.125 15 0 1 15 2L:3462400-3462446 6 msl-2 FBtr0077570|FBtr0077570|FBtr0077570|FBtr0077571|FBtr0077571|FBtr0077571 3462216|3462216|3462216|3462216|3462216|3462216 3463265|3463265|3463265|3463265|3463265|3463265 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 3462403 3462446 3'utr msl-2 FlyBase G5714.1 AGATTGCTTTGCCCAAAATGTGGATGCTGTGAGCTAAAAAAAAC 10 3462421 0.692380795 4 10 60 1 1.113943352 0.230769231 0.3 0.461538462 10 0 0 13 2L:3462403-3462446 6 12 329 FBgn0005616 482.6633333 15.65666667 24.13 0.02486205 0.766446668 0.497306258 2 1 1.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 3621106 3621111 + 2L_3621106_3621111_+ 0.98252043 0.964777757 0.973649093 0.012545913 Dot FBtr0339571|FBtr0339571|FBtr0339571|FBtr0077532|FBtr0077532|FBtr0077532 3621072|3621072|3621072|3621072|3621072|3621072 3621573|3621573|3621573|3621171|3621171|3621171 2L + 3621087 3621126 3'utr Dot FlyBase G1591.1 ACGCATGACTTGACAATTTCTGTGACAACAAATATATATA 17 3621104 0.636724767 6 16 116 0.947368421 1.255272505 0 0.117647059 0.210526316 17 1 0 18 2L:3621087-3621126 6 Dot FBtr0339571|FBtr0339571|FBtr0339571|FBtr0077532|FBtr0077532|FBtr0077532 3621072|3621072|3621072|3621072|3621072|3621072 3621573|3621573|3621573|3621171|3621171|3621171 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 3621080 3621128 3'utr Dot FlyBase G1254.1 AAGATTTACGCATGACTTGACAATTTCTGTGACAACAAATATATATATT 12 3621104 0.95693276 5 12 93 1 1.230448921 0 0.333333333 0.529411765 12 0 0 17 2L:3621080-3621128 6 13.5 330 FBgn0015663 146.7833333 8.573333333 13.06 0.091972295 1.574650078 1.033690658 2 2 2 0.25 dme-miR-932-5p 8mer-A1 GGAATTGA 2L 3622414 3622421 - 2L_3622414_3622421_- 0.674517035 0.674195284 0.674356159 0.000227476 for FBtr0089307|FBtr0089304|FBtr0089310|FBtr0089312|FBtr0089306|FBtr0089308|FBtr0089309|FBtr0100363 3622072|3622072|3622072|3622072|3622072|3622072|3622072|3622072 3622777|3622777|3622777|3622777|3622777|3622777|3622777|3622777 2L - 3622326 3622437 3'utr for FlyBase G7353.1 TGTGTCTAGTTCGCTTGGAATTGATGTAAATTGTAAGTAGGTCTGTGACTCTGTTTCAGAGCTCTGTTAGCCATGTGCATTGTATAAATTCAGCTATTTGTATCTATTAAAT 19 3622422 0.990417228 8 17 176 0.92 1.361727836 0.24 0.210526316 0.4 19 2 0 23 2L:3622326-3622437 8 for FBtr0100363|FBtr0089306|FBtr0089308|FBtr0089309|FBtr0089310|FBtr0089312|FBtr0089307|FBtr0089304 3622072|3622072|3622072|3622072|3622072|3622072|3622072|3622072 3622777|3622777|3622777|3622777|3622777|3622777|3622777|3622777 GGAATTGA 8mer-A1 dme-miR-932-5p 2L - 3622394 3622443 3'utr for FlyBase G5751.1 GATATATGTGTCTAGTTCGCTTGGAATTGATGTAAATTGTAAGTAGGTCT 7 3622422 0.992924074 3 5 69 0.888888889 0.903089987 0.222222222 0.142857143 0.333333333 7 1 0 8 2L:3622394-3622443 8 10 331 FBgn0000721 694.3333333 18.66333333 28.79666667 0.014402304 0.535809966 0.347262415 1 1 1 0.25 dme-miR-305-5p 8mer-m1 AGTACAAT 2L 3783588 3783595 + 2L_3783588_3783595_+ 0.563272506 0.566179368 0.564725937 0.002055489 bowl FBtr0307029|FBtr0077490|FBtr0307027|FBtr0077492|FBtr0077491|FBtr0077493|FBtr0307028 3783283|3783283|3783283|3783283|3783283|3783283|3783283 3784121|3784121|3784121|3784121|3784121|3784121|3784121 2L + 3783564 3783645 3'utr bowl FlyBase G1619.1 TAGATCTACAATTTAATACTTTTTAGTACAATGTCTAGGCAAGGCAATAGACCTAAACTAAGTAATAAAATCAGTTAAGCGA 121 3783586 0.989399388 13 111 1090 0.935714286 1.8162413 0.192857143 0.123966942 0.242857143 121 8 1 131 2L:3783564-3783645 8 bowl FBtr0077491|FBtr0077493|FBtr0307028|FBtr0307029|FBtr0077490|FBtr0307027|FBtr0077492 3783283|3783283|3783283|3783283|3783283|3783283|3783283 3784121|3784121|3784121|3784121|3784121|3784121|3784121 AGTACAAT 8mer-m1 dme-miR-305-5p 2L + 3783538 3783704 3'utr bowl FlyBase G1283.1 GACCCACAAGTACATTAAAATAAATTTAGATCTACAATTTAATACTTTTTAGTACAATGTCTAGGCAAGGCAATAGACCTAAACTAAGTAATAAAATCAGTTAAGCGATAATTGTAAGCGAAACAAACTCCGTTGTTGCATTTTATAGAGCTCTTATGCGTTAGGAT 171 3783586 0.834758409 17 161 1556 0.937743191 1.603865792 0.155642023 0.385964912 0.591439689 171 11 5 241 2L:3783538-3783704 8 92.5 332 FBgn0004893 346.31 11.79 17.92333333 0.26710173 7.845631891 5.160870374 2 2 2 0.25 dme-miR-277-3p 7mer-m8 TGCATTT 2L 3783674 3783680 + 2L_3783674_3783680_+ 0.403622883 0.366069601 0.384846242 0.026554193 bowl FBtr0307029|FBtr0077490|FBtr0307027|FBtr0077492|FBtr0077491|FBtr0077493|FBtr0307028 3783283|3783283|3783283|3783283|3783283|3783283|3783283 3784121|3784121|3784121|3784121|3784121|3784121|3784121 2L + 3783646 3783859 3'utr bowl FlyBase G1619.2 TAATTGTAAGCGAAACAAACTCCGTTGTTGCATTTTATAGAGCTCTTATGCGTTAGGATTTTAGCTTAAATCTACCGATTTAAATGTTTAAGCCTTTAGTACGAGAGTCTATCGATTAGTTTTTAATGTGTGGCCCAACACTAAGTGTTGCTGTTTGCTGAGTGAATTCCAATTTTTTATTTATGTTTCCTTATCCGGTAAGCTAATCTTAATG 182 3783673 0.98939516 33 169 1736 0.925925926 1.698970004 0.162037037 0.159340659 0.291666667 182 13 3 200 2L:3783646-3783859 7 bowl FBtr0077491|FBtr0077493|FBtr0307028|FBtr0307029|FBtr0077490|FBtr0307027|FBtr0077492 3783283|3783283|3783283|3783283|3783283|3783283|3783283 3784121|3784121|3784121|3784121|3784121|3784121|3784121 TGCATTT 7mer-m8 dme-miR-277-3p 2L + 3783538 3783704 3'utr bowl FlyBase G1283.1 GACCCACAAGTACATTAAAATAAATTTAGATCTACAATTTAATACTTTTTAGTACAATGTCTAGGCAAGGCAATAGACCTAAACTAAGTAATAAAATCAGTTAAGCGATAATTGTAAGCGAAACAAACTCCGTTGTTGCATTTTATAGAGCTCTTATGCGTTAGGAT 171 3783673 0.834758409 17 161 1556 0.937743191 1.603865792 0.155642023 0.385964912 0.591439689 171 11 5 241 2L:3783538-3783704 7 102.5 333 FBgn0004893 346.31 11.79 17.92333333 0.295977592 8.693808312 5.718802306 1 1 1 0.25 dme-miR-7-5p 7mer-m8 GTCTTCC 2L 3784044 3784050 + 2L_3784044_3784050_+ 0.704769407 0.702491262 0.703630335 0.00161086 bowl FBtr0307029|FBtr0077490|FBtr0307027|FBtr0077492|FBtr0077491|FBtr0077493|FBtr0307028 3783283|3783283|3783283|3783283|3783283|3783283|3783283 3784121|3784121|3784121|3784121|3784121|3784121|3784121 2L + 3784018 3784101 3'utr bowl FlyBase G1620.1 ATATAAGCAACCCATAGAATTCCATGGTCTTCCTTCAATTTTAAATGATTTTATTCAAACCATAGCGAGTTAGTTGATTTCAAA 138 3784042 0.773076778 12 130 1064 0.947368421 1.364416975 0 0.195652174 0.350877193 138 3 6 162 2L:3784018-3784101 7 bowl FBtr0077491|FBtr0077493|FBtr0307028|FBtr0307029|FBtr0077490|FBtr0307027|FBtr0077492 3783283|3783283|3783283|3783283|3783283|3783283|3783283 3784121|3784121|3784121|3784121|3784121|3784121|3784121 GTCTTCC 7mer-m8 dme-miR-7-5p 2L + 3784016 3784103 3'utr bowl FlyBase G1286.1 TAATATAAGCAACCCATAGAATTCCATGGTCTTCCTTCAATTTTAAATGATTTTATTCAAACCATAGCGAGTTAGTTGATTTCAAATA 119 3784042 0.783192276 12 118 966 0.994444444 2.252853031 0.016666667 0.411764706 0.611111111 119 1 0 179 2L:3784016-3784103 7 119.5 334 FBgn0004893 346.31 11.79 17.92333333 0.345066559 10.13570823 6.667286591 2 2 2 0.25 dme-miR-283-5p 7mer-A1 GATATTA 2L 408978 408984 - 2L_408978_408984_- 0.747964929 0.668741431 0.70835318 0.056019474 AP-2alpha FBtr0089489|FBtr0089488 408874|408028 409387|409387 2L - 408959 409019 3'utr AP-2alpha FlyBase G6532.1 TATATTGTTGCATCATTTCGAGGCAGTAGCAATTGGATATTATATACCTATATACAGATCT 25 408987 0.832907339 7 21 188 0.892857143 1.397940009 0.214285714 0.12 0.214285714 25 3 0 25 2L:408959-409019 7 AP-2alpha FBtr0089488|FBtr0089489 408028|408874 409387|409387 GATATTA 7mer-A1 dme-miR-283-5p 2L - 408961 408999 3'utr AP-2alpha FlyBase G5105.1 AGGCAGTAGCAATTGGATATTATATACCTATATACAGAT 5 408979 0.996005565 2 2 31 0.461538462 0.77815125 0 0.8 0.923076923 5 7 0 6 2L:408961-408999 7 8.5 335 FBgn0264855 2009.92 51.58333333 79.16333333 0.004229024 0.164781906 0.107372942 3 -5 -1 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA 2L 417785 417792 + 2L_417785_417792_+ 0.535936982 0.54422177 0.540079376 0.005858238 ebi FBtr0078055 417633 418536 2L + 417764 417810 3'utr ebi FlyBase G752.1 TTTTACTTTTGATTCAAAAATTGCATTTAACTATATTTTTTAAAGAA 78 417784 0.876237012 2 76 713 0.989130435 1.658011397 0 0.153846154 0.282608696 78 0 1 91 2L:417764-417810 8 ebi FBtr0078055 417633 418536 TGCATTTA 8mer-A1 dme-miR-277-3p 2L + 417765 417813 3'utr ebi FlyBase G603.1 TTTACTTTTGATTCAAAAATTGCATTTAACTATATTTTTTAAAGAAGTG 50 417784 0.867074054 3 49 428 0.97260274 1.851258349 0.02739726 0.44 0.616438356 50 2 0 71 2L:417765-417813 8 63 336 FBgn0263933 724.51 26.33666667 40.32333333 0.086955322 2.392102266 1.562370836 1 1 1 0.25 dme-miR-317-5p 6mer2-7 TATCCC 2L 417893 417898 + 2L_417893_417898_+ 0.757167244 0.864479067 0.810823156 0.075880972 ebi FBtr0078055 417633 418536 2L + 417845 418008 3'utr ebi FlyBase G753.1 AGTCGATTTGGATCTGGAGTCCGGACCTTAGGTAACTCCTTTCTTAGCTATCCCGCCCTGCAATCGTATTTGTAATTGCTTTAAATTCTAATTAGTTCTTTAAGGTATACCTCTTGAGATGAGATCCTCCCGCTTTTGTCCACGTCTATTTCGTACGCTTAGTT 76 417895 0.823181114 19 74 560 0.977272727 1.934498451 0.068181818 0.131578947 0.25 76 2 0 86 2L:417845-418008 6 ebi FBtr0078055 417633 418536 TATCCC 6mer2-7 dme-miR-317-5p 2L + 417841 417912 3'utr ebi FlyBase G604.1 CATAAGTCGATTTGGATCTGGAGTCCGGACCTTAGGTAACTCCTTTCTTAGCTATCCCGCCCTGCAATCGTA 35 417895 0.773981067 12 34 234 1 1.681241237 0.145833333 0.371428571 0.541666667 35 0 0 48 2L:417841-417912 6 39 337 FBgn0263933 724.51 26.33666667 40.32333333 0.053829485 1.480825212 0.967181946 -2 -2 -2 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 2L 4345324 4345330 + 2L_4345324_4345330_+ 0.474582783 0.469691338 0.472137061 0.003458813 Atet FBtr0112898|FBtr0077426|FBtr0112899|FBtr0077427 4344479|4344479|4344479|4344479 4345776|4345411|4345776|4345411 2L + 4345274 4345349 3'utr Atet FlyBase G1646.1 TACTATTTTTACGATGGGATGCAATCGGATTTGTGTTAGCTGCGCGTATTTGTGATTATTACATTTTAATTTAGTA 254 4345323 0.973262597 18 247 2579 0.973684211 1.86923172 0.006578947 0.177165354 0.3125 254 5 3 296 2L:4345274-4345349 7 Atet FBtr0112898|FBtr0077426|FBtr0112899|FBtr0077427 4344479|4344479|4344479|4344479 4345776|4345411|4345776|4345411 TGTGATT 7mer-m1 dme-miR-308-3p 2L + 4345271 4345348 3'utr Atet FlyBase G1304.1 AATTACTATTTTTACGATGGGATGCAATCGGATTTGTGTTAGCTGCGCGTATTTGTGATTATTACATTTTAATTTAGT 164 4345323 0.796964753 19 152 1701 0.926829268 1.316542162 0.040650407 0.353658537 0.569105691 164 8 10 228 2L:4345271-4345348 7 196 338 FBgn0020762 413.91 11.67333333 17.79666667 0.473532894 16.79040548 11.01329837 1 1 1 0.25 dme-miR-980-3p 6mer3-8 GGCAGC 2L 4345435 4345440 + 2L_4345435_4345440_+ 0.94829928 0.948475655 0.948387467 0.000124734 Atet FBtr0112898|FBtr0112899 4344479|4344479 4345776|4345776 2L + 4345413 4345453 3'utr Atet FlyBase G1647.1 AACAGCACGCTCTCCTTCCTTCGGCAGCCACACCCAAAGTA 15 4345433 0.960407463 2 15 75 1 1.278753601 0.105263158 0.2 0.368421053 15 0 0 19 2L:4345413-4345453 6 Atet FBtr0112898|FBtr0112899 4344479|4344479 4345776|4345776 GGCAGC 6mer3-8 dme-miR-980-3p 2L + 4345416 4345453 3'utr Atet FlyBase G1306.1 AGCACGCTCTCCTTCCTTCGGCAGCCACACCCAAAGTA 7 4345433 0.904276849 2 6 31 0.833333333 1 0 0.571428571 0.75 7 2 0 10 2L:4345416-4345453 6 11 339 FBgn0020762 413.91 11.67333333 17.79666667 0.026575826 0.942318675 0.618093276 2 2 2 0.25 dme-miR-277-3p 6mer2-7 GCATTT 2L 4399866 4399871 + 2L_4399866_4399871_+ 0.999979202 0.996612266 0.998295734 0.002380758 l(2)k05819 FBtr0331447|FBtr0305968|FBtr0077432 4399732|4399732|4399732 4400487|4400105|4400105 2L + 4399852 4399882 3'utr l(2)k05819 FlyBase G1665.1 AGTTGTTTCTGTCAGCATTTGTTCTTAGGTG 5 4399871 0.717877533 4 5 50 1 0.698970004 0.2 0 0 5 0 0 5 2L:4399852-4399882 6 l(2)k05819 FBtr0305968|FBtr0331447|FBtr0077432 4399732|4399732|4399732 4400105|4400487|4400105 GCATTT 6mer2-7 dme-miR-277-3p 2L + 4399831 4399877 3'utr l(2)k05819 FlyBase G1323.1 AGTCTGGGTATCCTTAGACGAAGTTGTTTCTGTCAGCATTTGTTCTT 5 4399862 0.991013988 4 5 53 1 0.903089987 0.125 0.4 0.625 5 0 0 8 2L:4399831-4399877 6 4.5 340 FBgn0022153 937.2133333 22.65666667 34.38 0.004801468 0.198617037 0.130890052 -5 4 -0.5 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 2L 4461630 4461635 + 2L_4461630_4461635_+ 0.953914255 0.982689632 0.968301944 0.02034721 CG15435 FBtr0077441|FBtr0345632 4461558|4461558 4461746|4461746 2L + 4461612 4461645 3'utr CG15435 FlyBase G1682.1 TGTTGACCACTTTGCATCTGTGTTTTTGTCGTAT 13 4461628 0.793264365 3 11 146 0.882352941 1.176091259 0.294117647 0.307692308 0.470588235 13 2 0 15 2L:4461612-4461645 6 CG15435 FBtr0345632|FBtr0077441 4461558|4461558 4461746|4461746 TGTGTT 6mer3-8 dme-miR-317-3p 2L + 4461611 4461648 3'utr CG15435 FlyBase G1333.1 ATGTTGACCACTTTGCATCTGTGTTTTTGTCGTATTGT 9 4461628 0.753238236 4 8 95 0.923076923 1.079181246 0.153846154 0.333333333 0.538461538 9 1 0 12 2L:4461611-4461648 6 10 341 FBgn0031608 120.9866667 8.103333333 12.34333333 0.082653736 1.234060058 0.810153929 2 2 2 0.25 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 447725 447732 + 2L_447725_447732_+ 0.496615434 0.62833533 0.562475382 0.093140035 ex FBtr0329832|FBtr0078059 447248|447248 448701|448701 2L + 447696 447761 3'utr ex FlyBase G791.1 AAATACACATTCAAATAATCAGAACCCAGTCTAGTCACTTAAGGGAATTGGTAACGTAACCACAGC 33 447734 0.657979396 9 31 162 0.906976744 0.892094603 0.046511628 0.181818182 0.372093023 33 0 4 39 2L:447696-447761 8 ex FBtr0329832|FBtr0078059 447248|447248 448701|448701 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L + 447691 447744 3'utr ex FlyBase G632.1 CCTCAAAATACACATTCAAATAATCAGAACCCAGTCTAGTCACTTAAGGGAATT 31 447725 0.959012801 6 29 140 0.95 1.278753601 0.025 0.258064516 0.425 31 1 1 38 2L:447691-447744 8 29 342 FBgn0004583 1742.906667 31.79333333 48.95666667 0.016638871 0.91214091 0.592360591 -9 0 -4.5 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 2L 4478340 4478346 - 2L_4478340_4478346_- 0.462573009 0.442661419 0.452617214 0.014079627 dp FBtr0332354|FBtr0332350|FBtr0332348|FBtr0332349|FBtr0332352|FBtr0332345|FBtr0305142|FBtr0332351 4477460|4477460|4477460|4477460|4477460|4477460|4477460|4477460 4479537|4479537|4479537|4479537|4479537|4479537|4479537|4479537 2L - 4478307 4478383 3'utr dp FlyBase G7507.1 ATTTTTGTAGTTTTATAGTCAATTAATATTAAATTGTTGTGATTGTTTTTAATGCAAAAGAGATACTTCCACTAACT 30 4478340 0.992832346 8 29 344 0.973684211 1.568201724 0.184210526 0.2 0.368421053 30 1 0 37 2L:4478307-4478383 7 dp FBtr0332348|FBtr0332352|FBtr0305142|FBtr0332351|FBtr0332349|FBtr0332354|FBtr0332345|FBtr0332350 4477460|4477460|4477460|4477460|4477460|4477460|4477460|4477460 4479537|4479537|4479537|4479537|4479537|4479537|4479537|4479537 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 4478320 4478375 3'utr dp FlyBase G5850.1 AGTTTTATAGTCAATTAATATTAAATTGTTGTGATTGTTTTTAATGCAAAAGAGAT 25 4478340 0.883336653 8 25 286 1 1.544068044 0.114285714 0.32 0.514285714 25 0 0 35 2L:4478320-4478375 7 23.5 343 FBgn0053196 31 0.07 0.11 0.758064516 335.7142857 213.6363636 -6 -6 -6 0.25 dme-miR-34-5p 7mer-A1 ACTGCCA 2L 4478549 4478555 - 2L_4478549_4478555_- 0.795497378 0.822701664 0.809099521 0.019236345 dp FBtr0332354|FBtr0332350|FBtr0332348|FBtr0332349|FBtr0332352|FBtr0332345|FBtr0305142|FBtr0332351 4477460|4477460|4477460|4477460|4477460|4477460|4477460|4477460 4479537|4479537|4479537|4479537|4479537|4479537|4479537|4479537 2L - 4478534 4478579 3'utr dp FlyBase G7509.1 AATCGTTGAGGGAACATAACTATAACTGCCACTGAGGCGTCATCAG 7 4478557 0.96277779 4 7 37 1 0.954242509 0.222222222 0.285714286 0.444444444 7 0 0 9 2L:4478534-4478579 7 dp FBtr0332348|FBtr0332352|FBtr0305142|FBtr0332351|FBtr0332349|FBtr0332354|FBtr0332345|FBtr0332350 4477460|4477460|4477460|4477460|4477460|4477460|4477460|4477460 4479537|4479537|4479537|4479537|4479537|4479537|4479537|4479537 ACTGCCA 7mer-A1 dme-miR-34-5p 2L - 4478528 4478572 3'utr dp FlyBase G5852.1 GAGGGAACATAACTATAACTGCCACTGAGGCGTCATCAGCGCACA 12 4478557 0.71301643 2 10 55 0.928571429 1.113943352 0.642857143 0.166666667 0.285714286 12 1 0 13 2L:4478528-4478572 7 9 344 FBgn0053196 31 0.07 0.11 0.290322581 128.5714286 81.81818182 2 2 2 0.25 dme-miR-968-5p 7mer-m8 ACTACTT 2L 447935 447941 + 2L_447935_447941_+ 0.517088933 0.5159038 0.516496367 0.000837992 ex FBtr0329832|FBtr0078059 447248|447248 448701|448701 2L + 447898 447979 3'utr ex FlyBase G792.2 TACTTAGTTAGGCCAGAAATGCGAATACTTAAAACTAACTACTTCCGCCCAAACAACTGTGATTGATTTTTATTTAAACTTA 2898 447940 0.9175729 20 2867 12252 0.990640953 2.543198586 0.033465683 0.178743961 0.32501418 2898 24 9 3493 2L:447898-447979 7 ex FBtr0329832|FBtr0078059 447248|447248 448701|448701 ACTACTT 7mer-m8 dme-miR-968-5p 2L + 447895 447978 3'utr ex FlyBase G634.1 AAATACTTAGTTAGGCCAGAAATGCGAATACTTAAAACTAACTACTTCCGCCCAAACAACTGTGATTGATTTTTATTTAAACTT 1793 447940 0.847468128 16 1743 7292 0.97739066 2.46686762 0.026315789 0.357501394 0.57301705 1793 53 8 2637 2L:447895-447978 7 2137 345 FBgn0004583 1742.906667 31.79333333 48.95666667 1.226112701 67.21534913 43.65084769 -5 -5 -5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 448867 448873 - 2L_448867_448873_- 0.483460411 0.496668481 0.490064446 0.009339537 crq FBtr0078087|FBtr0078087|FBtr0078087|FBtr0331233|FBtr0331233|FBtr0331233 448252|448252|448252|448252|448252|448252 449020|449020|449020|449020|449020|449020 2L - 448816 449139 stop_codon crq FlyBase G6564.1 TATTCGGCTATTCCATGATAGCTTTTGCCAGTGTCTTTCTCATCACCGGCATCACGCTGACTGTGACGAAAAAGTGGGTGCGGCGAACTCCCGAGGATGAGGACATACTTACCAACTAGAGCAAAATAGTTTTTAAGCTTTGCCAAAGTGCCAGGAATTGTTAACTCTCCTAGTTCATTCTGATAGTCGCCCGTCAAATGCTGTTCTTTGTCAGTTATGCGTTATGTAATATGTAAGTGATACGAATCGACGTTCGTCTTGCAGTTTGTGATAGCAAAACCTACTCTAAAAAAAAAACTAAAAACTACTCTAACTCTAAAAAAA 807 448874 0.937649723 54 760 6212 0.944265809 1.564764667 0.175777063 0.133828996 0.250803859 807 29 23 881 2L:448816-449139 7 crq FBtr0331232|FBtr0331232|FBtr0331232|FBtr0078088|FBtr0078088|FBtr0078088|FBtr0078087|FBtr0078087|FBtr0078087|FBtr0331233|FBtr0331233|FBtr0331233|FBtr0304741|FBtr0304741|FBtr0304741 448714|448714|448714|448714|448714|448714|448252|448252|448252|448252|448252|448252|448714|448714|448714 449020|449020|449020|449020|449020|449020|449020|449020|449020|449020|449020|449020|449020|449020|449020 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 448819 449017 3'utr crq FlyBase G5128.1 AAAATAGTTTTTAAGCTTTGCCAAAGTGCCAGGAATTGTTAACTCTCCTAGTTCATTCTGATAGTCGCCCGTCAAATGCTGTTCTTTGTCAGTTATGCGTTATGTAATATGTAAGTGATACGAATCGACGTTCGTCTTGCAGTTTGTGATAGCAAAACCTACTCTAAAAAAAAAACTAAAAACTACTCTAACTCTAAAA 473 448874 0.938145021 44 452 3729 0.952574526 1.700827289 0.185636856 0.412262156 0.623306233 473 22 13 703 2L:448819-449017 7 372.5 346 FBgn0015924 1407.533333 61.27666667 93.41333333 0.264647374 6.07898602 3.98765344 1 1 1 0.25 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 458977 458984 - 2L_458977_458984_- 0.590126862 0.393002825 0.491564843 0.139387788 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 458932 459036 3'utr CG4297 FlyBase G6576.1 ACATATATGTCTGTAACTCTATACTTTTAAATCGGAGGTTTTCACTGTACCTTAGCTTTAAGATTTGTGACTTTATCAATGTGAGTGTCTTTGAGCAAACAAAAC 32 458985 0.990795798 16 31 320 0.972972973 1.556302501 0.162162162 0.15625 0.27027027 32 1 0 36 2L:458932-459036 8 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 458940 459008 3'utr CG4297 FlyBase G5137.1 AAATCGGAGGTTTTCACTGTACCTTAGCTTTAAGATTTGTGACTTTATCAATGTGAGTGTCTTTGAGCA 16 458985 0.950431636 8 13 145 0.857142857 1.255272505 0.142857143 0.3125 0.476190476 16 3 0 18 2L:458940-459008 8 17.5 347 FBgn0031258 226.3333333 3.93 5.996666667 0.077319588 4.452926209 2.918287938 1 1 1 0.25 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 459178 459185 - 2L_459178_459185_- 0.595604526 0.594799274 0.5952019 0.000569362 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 459149 459233 3'utr CG4297 FlyBase G6578.1 AGCTTCTAAATGTATGTTCATTCGTTGGTAACTTTTACGACTAAGTAATACGCTTAATTTTAGTACAAACAAAATACAAAGTGCA 32 459185 0.98377861 10 32 245 1 1.579783597 0.105263158 0.1875 0.315789474 32 0 0 38 2L:459149-459233 8 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 TACGCTTA 8mer-A1 dme-miR-965-3p 2L - 459158 459234 3'utr CG4297 FlyBase G5138.1 AAGCTTCTAAATGTATGTTCATTCGTTGGTAACTTTTACGACTAAGTAATACGCTTAATTTTAGTACAAACAAAATA 17 459185 0.964547922 6 16 130 0.875 1.322219295 0.083333333 0.294117647 0.5 17 3 0 21 2L:459158-459234 8 19.5 348 FBgn0031258 226.3333333 3.93 5.996666667 0.086156112 4.961832061 3.251806559 0 0 0 0.25 dme-bantam-3p 6mer3-8 TGATCT 2L 459745 459750 - 2L_459745_459750_- 0.601715517 0.810055983 0.70588575 0.14731898 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 459668 459767 3'utr CG4297 FlyBase G6582.1 CATCTGTTGCAATTGTTTGATCTGTTAGTAGCCGAAGACTTTGTTTTAGTGCAATTATTTGTTAGGTTCCTAGAGCAATTTGTTGTGTTTATTTTAAGAT 44 459726 0.770975045 15 43 409 0.979166667 1.672097858 0.104166667 0.090909091 0.166666667 44 1 0 47 2L:459668-459767 6 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 TGATCT 6mer3-8 dme-bantam-3p 2L - 459684 459768 3'utr CG4297 FlyBase G5141.1 ACATCTGTTGCAATTGTTTGATCTGTTAGTAGCCGAAGACTTTGTTTTAGTGCAATTATTTGTTAGGTTCCTAGAGCAATTTGTT 47 459726 0.989408011 12 44 424 0.947368421 1.857332496 0.157894737 0.468085106 0.671052632 47 4 0 72 2L:459684-459768 6 25 349 FBgn0031258 226.3333333 3.93 5.996666667 0.110456554 6.361323155 4.168982768 -24 -24 -24 0.25 dme-miR-14-3p 6mer3-8 AAGACT 2L 460327 460332 - 2L_460327_460332_- 0.64777833 0.70651484 0.677146585 0.041532977 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 460261 460425 3'utr CG4297 FlyBase G6585.1 ATAAAAGAAACACCACACGTACACTTTAGATACACCACAAAACAAGAAAACTAAAGATATGGATGCAAAAGCAGCTACACTTTACAGAATCTCAAGACTTTTTTTAACATTTGGATTTATTTAAGGAAACGAAATGTAGCGTAATATAGTCATTTTAGGAAAATC 251 460325 0.984723099 25 243 1953 0.974842767 1.889301703 0.034591195 0.219123506 0.383647799 251 5 3 310 2L:460261-460425 6 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 AAGACT 6mer3-8 dme-miR-14-3p 2L - 460273 460382 3'utr CG4297 FlyBase G5146.1 AAGAAAACTAAAGATATGGATGCAAAAGCAGCTACACTTTACAGAATCTCAAGACTTTTTTTAACATTTGGATTTATTTAAGGAAACGAAATGTAGCGTAATATAGTCAT 155 460325 0.987101545 20 150 1308 0.976851852 2.02325246 0.009259259 0.316129032 0.509259259 155 4 1 211 2L:460273-460382 6 172.5 350 FBgn0031258 226.3333333 3.93 5.996666667 0.762150221 43.89312977 28.7659811 -7 -7 -7 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 2L 460494 460501 - 2L_460494_460501_- 0.625431894 0.617368642 0.621400268 0.005701614 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 460451 460525 stop_codon CG4297 FlyBase G6586.1 AAGTCAAATAGGATTGCAGCTTCTACCAAAGATATTTCTGGTCCCTGGACAGGATCAGATGTGTTCGGCTCGTCG 32 460502 0.821810637 9 26 229 0.8 1.146128036 0.085714286 0.0625 0.142857143 32 6 1 28 2L:460451-460525 8 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 460450 460516 stop_codon CG4297 FlyBase G5147.1 AGGATTGCAGCTTCTACCAAAGATATTTCTGGTCCCTGGACAGGATCAGATGTGTTCGGCTCGTCGA 19 460502 0.849296098 7 18 141 0.961538462 1.397940009 0.153846154 0.315789474 0.5 19 1 0 25 2L:460450-460516 8 14.5 351 FBgn0031258 226.3333333 3.93 5.996666667 0.064064801 3.68956743 2.418010006 1 1 1 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2L 4841642 4841648 - 2L_4841642_4841648_- 0.600093989 0.461271066 0.530682528 0.098162614 mxt FBtr0077410|FBtr0332479 4841480|4841480 4842233|4842233 2L - 4841619 4841679 3'utr mxt FlyBase G7575.1 TTTTCAAGATTTGAAATTGTATTTTGTTTTCTCTAGTCTATGCATCATAGAAATTTGTATA 26 4841640 0.993160799 6 24 288 0.931034483 1.431363764 0.137931034 0.115384615 0.206896552 26 2 0 27 2L:4841619-4841679 7 mxt FBtr0332479|FBtr0077410 4841480|4841480 4842233|4842233 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2L - 4841629 4841658 3'utr mxt FlyBase G5894.1 TTTTGTTTTCTCTAGTCTATGCATCATAGA 18 4841640 0.826571868 3 18 178 1 1.361727836 0.217391304 0.277777778 0.434782609 18 0 0 23 2L:4841629-4841658 7 20.5 352 FBgn0031637 825.01 33.64666667 51.55333333 0.024848184 0.609272835 0.39764645 -8 -8 -8 0.25 dme-miR-980-3p 7mer-A1 GCAGCTA 2L 4841919 4841925 - 2L_4841919_4841925_- 0.730951891 0.687284342 0.709118116 0.030877656 mxt FBtr0077410|FBtr0332479 4841480|4841480 4842233|4842233 2L - 4841907 4841940 3'utr mxt FlyBase G7576.1 ACTAATTCAAAAAATGCAGCTAAATGAAAAGCCT 10 4841926 0.935437701 2 7 37 0.818181818 0.954242509 0 0.1 0.181818182 10 2 0 9 2L:4841907-4841940 7 mxt FBtr0332479|FBtr0077410 4841480|4841480 4842233|4842233 GCAGCTA 7mer-A1 dme-miR-980-3p 2L - 4841889 4841937 3'utr mxt FlyBase G5895.1 AATTCAAAAAATGCAGCTAAATGAAAAGCCTCGAAGCGGCCCTAACTTG 16 4841926 0.951671458 3 12 53 0.708333333 1.230448921 0.041666667 0.4375 0.625 16 7 0 17 2L:4841889-4841937 7 10.5 353 FBgn0031637 825.01 33.64666667 51.55333333 0.012727118 0.312066574 0.203672572 1 1 1 0.25 dme-miR-999-3p 6mer3-8 AGTTAA 2L 4841980 4841985 - 2L_4841980_4841985_- 0.742274413 0.761053595 0.751664004 0.0132789 mxt FBtr0077410|FBtr0332479 4841480|4841480 4842233|4842233 2L - 4841976 4842010 3'utr mxt FlyBase G7577.1 AACTAGAAAATTCAACGAAGCTCTTAGTTAAGTTC 26 4841987 0.732248944 2 25 168 1 1.477121255 0 0.153846154 0.266666667 26 0 0 30 2L:4841976-4842010 6 mxt FBtr0332479|FBtr0077410 4841480|4841480 4842233|4842233 AGTTAA 6mer3-8 dme-miR-999-3p 2L - 4841976 4842010 3'utr mxt FlyBase G5896.1 AACTAGAAAATTCAACGAAGCTCTTAGTTAAGTTC 12 4841987 0.712871479 3 11 82 0.941176471 1.204119983 0 0.25 0.470588235 12 1 0 16 2L:4841976-4842010 6 18.5 354 FBgn0031637 825.01 33.64666667 51.55333333 0.022423971 0.549831583 0.358851675 2 2 2 0.25 dme-miR-8-3p 7mer-m8 CAGTATT 2L 4842961 4842967 - 2L_4842961_4842967_- 0.661023621 0.560370882 0.610697251 0.071172207 mxt FBtr0300941 4842582 4843059 2L - 4842915 4843031 3'utr mxt FlyBase G7582.1 AATTTTACGTAGCCGGAATACGTATTATTGAATCTCAGTCACAGATAGGCTTTTCTTTTCATGTCAGTATTTTTGCTGTTTTAATTTTATATAACTTATCATTAAGAAAAGGTGAAG 99 4842970 0.990269486 14 95 956 0.964912281 1.740362689 0.061403509 0.131313131 0.245614035 99 3 1 110 2L:4842915-4843031 7 mxt FBtr0300941 4842582 4843059 CAGTATT 7mer-m8 dme-miR-8-3p 2L - 4842943 4843032 3'utr mxt FlyBase G5899.2 TAATTTTACGTAGCCGGAATACGTATTATTGAATCTCAGTCACAGATAGGCTTTTCTTTTCATGTCAGTATTTTTGCTGTTTTAATTTTA 87 4842979 0.722695713 18 83 801 0.960629921 2.086359831 0.086614173 0.310344828 0.527559055 87 5 0 122 2L:4842943-4843032 7 27 355 FBgn0031637 825.01 33.64666667 51.55333333 0.032726876 0.802456905 0.523729471 3 12 7.5 0.25 dme-miR-318-3p 7mer-A1 CCAGTGA 2L 4903164 4903170 + 2L_4903164_4903170_+ 0.771970933 0.812101187 0.79203606 0.028376407 CG3036 FBtr0077391|FBtr0336832 4903152|4903152 4903889|4903458 2L + 4903132 4903197 stop_codon CG3036 FlyBase G1738.1 GCCCCTCAAGAACGAGAAGTGATTGCACATCGCCAGTGAGACTCATTCGGTGCCACTGCTGTTCGT 43 4903168 0.967037442 4 43 236 1 1.707570176 0.137254902 0.186046512 0.31372549 43 0 0 51 2L:4903132-4903197 7 CG3036 FBtr0077391|FBtr0336832 4903152|4903152 4903889|4903458 CCAGTGA 7mer-A1 dme-miR-318-3p 2L + 4903139 4903211 stop_codon CG3036 FlyBase G1374.1 AAGAACGAGAAGTGATTGCACATCGCCAGTGAGACTCATTCGGTGCCACTGCTGTTCGTGATGAGCGGAAGGA 26 4903168 0.97092299 6 25 147 0.974358974 1.579783597 0.128205128 0.384615385 0.58974359 26 1 0 38 2L:4903139-4903211 7 32 356 FBgn0031645 281.25 12.45666667 19.09 0.113777778 2.568905539 1.676270299 -4 -4 -4 0.25 dme-miR-304-5p 8mer-A1 TGAGATTA 2L 4903289 4903296 + 2L_4903289_4903296_+ 0.493508903 0.532769935 0.513139419 0.027761719 CG3036 FBtr0077391|FBtr0336832 4903152|4903152 4903889|4903458 2L + 4903266 4903313 3'utr CG3036 FlyBase G1739.1 TAAAGTAGTTGTTACTCCCACATTGAGATTACGGGGCTTTCATTTGGC 65 4903288 0.879752084 2 64 520 0.95890411 1.84509804 0.082191781 0.092307692 0.191780822 65 3 0 70 2L:4903266-4903313 8 CG3036 FBtr0077391|FBtr0336832 4903152|4903152 4903889|4903458 TGAGATTA 8mer-A1 dme-miR-304-5p 2L + 4903269 4903311 3'utr CG3036 FlyBase G1375.1 AGTAGTTGTTACTCCCACATTGAGATTACGGGGCTTTCATTTG 32 4903288 0.847297904 4 32 230 1 1.707570176 0.137254902 0.46875 0.666666667 32 0 0 51 2L:4903269-4903311 8 48 357 FBgn0031645 281.25 12.45666667 19.09 0.170666667 3.853358309 2.514405448 1 1 1 0.25 dme-miR-965-3p 6mer2-7 ACGCTT 2L 4947905 4947910 + 2L_4947905_4947910_+ 0.936924828 0.978387944 0.957656386 0.029318839 betaggt-I FBtr0330714|FBtr0078991 4947866|4947832 4948324|4948324 2L + 4947847 4947930 stop_codon betaggt-I FlyBase G1751.1 AAAGCACGAGGGGAAAGTTAAAGCACACTATTGTATTTATATTGGCCACATTTTAGCCACGCTTTTTATGCCCTTGCAGTTAGT 43 4947911 0.991726943 11 35 385 0.829787234 1.290034611 0.212765957 0.093023256 0.170212766 43 7 1 39 2L:4947847-4947930 6 betaggt-I FBtr0078991|FBtr0330714 4947832|4947866 4948324|4948324 ACGCTT 6mer2-7 dme-miR-965-3p 2L + 4947842 4947930 stop_codon betaggt-I FlyBase G1380.1 CGCACAAAGCACGAGGGGAAAGTTAAAGCACACTATTGTATTTATATTGGCCACATTTTAGCCACGCTTTTTATGCCCTTGCAGTTAGT 23 4947912 0.989239742 11 20 195 0.875 1.06694679 0.375 0.47826087 0.7 23 3 2 35 2L:4947842-4947930 6 16 358 FBgn0015000 534.58 37.06666667 56.91333333 0.029930039 0.431654676 0.281129202 -6 -7 -6.5 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 2L 4975378 4975384 - 2L_4975378_4975384_- 0.43846857 0.446805315 0.442636942 0.005894937 Gmd FBtr0079049 4975298 4975578 2L - 4975371 4975400 3'utr Gmd FlyBase G7634.1 ACGTTCATGTTCAGTGTGTGATTCTACTTG 8 4975385 0.720897976 4 8 71 1 1.041392685 0.181818182 0.25 0.454545455 8 0 0 11 2L:4975371-4975400 7 Gmd FBtr0079049 4975298 4975578 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 4975358 4975394 3'utr Gmd FlyBase G5933.1 ATGTTCAGTGTGTGATTCTACTTGTTTTTATACAGTA 6 4975386 0.985209722 4 6 49 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 2L:4975358-4975394 7 7 359 FBgn0031661 247.5733333 19.21 29.15 0.028274451 0.364393545 0.240137221 1 2 1.5 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 2L 4992149 4992155 + 2L_4992149_4992155_+ 0.496084373 0.498069393 0.497076883 0.001403607 CG34126 FBtr0329975|FBtr0329977|FBtr0329976|FBtr0329974|FBtr0290010 4991661|4991610|4991597|4991610|4991610 4992702|4992435|4992435|4992702|4992435 2L + 4992115 4992224 3'utr CG34126 FlyBase G1812.1 ACCAATTCCACTAAGATTGGATAGGACATATTGTTGTGATTCATGATCATATCAAAACTGAATTCTAGAAGCTCTATGCATTGCTGTTGTAATCGTGTGCTAACCAAATA 29 4992147 0.986850387 16 26 224 0.911764706 1.491361694 0.147058824 0.172413793 0.294117647 29 3 0 31 2L:4992115-4992224 7 CG34126 FBtr0329974|FBtr0329976|FBtr0329977|FBtr0329975|FBtr0290010 4991610|4991597|4991610|4991661|4991610 4992702|4992435|4992435|4992702|4992435 TGTGATT 7mer-m1 dme-miR-308-3p 2L + 4992111 4992230 3'utr CG34126 FlyBase G1425.1 TAAAACCAATTCCACTAAGATTGGATAGGACATATTGTTGTGATTCATGATCATATCAAAACTGAATTCTAGAAGCTCTATGCATTGCTGTTGTAATCGTGTGCTAACCAAATATTTGGC 36 4992148 0.775562654 19 33 286 0.862745098 1.342422681 0.176470588 0.333333333 0.529411765 36 6 1 44 2L:4992111-4992230 7 14 360 FBgn0083962 1546.97 31.44666667 48.27666667 0.009049949 0.445198219 0.289995167 2 1 1.5 0.25 dme-miR-79-3p 6mer2-7 AGCTTT 2L 4993806 4993811 - 2L_4993806_4993811_- 0.800291279 0.959139827 0.879715553 0.112322852 Rtnl1 FBtr0079039|FBtr0079043|FBtr0079040|FBtr0079038|FBtr0079044|FBtr0079042|FBtr0332413|FBtr0301539|FBtr0301540 4993639|4993639|4993639|4993639|4992806|4993639|4993639|4993639|4992806 4994207|4994207|4994207|4994207|4994207|4994207|4994207|4994207|4994207 2L - 4993773 4993820 3'utr Rtnl1 FlyBase G7654.1 GATTTATTCAGCTTTCTTAGTTTTCATGTGACCCTTTTTAAATTAATT 7 4993813 0.995863691 6 6 81 0.857142857 0.77815125 0.285714286 0 0 7 1 0 6 2L:4993773-4993820 6 Rtnl1 FBtr0301540|FBtr0301539|FBtr0332413|FBtr0079042|FBtr0079044|FBtr0079038|FBtr0079040|FBtr0079043|FBtr0079039 4992806|4993639|4993639|4993639|4992806|4993639|4993639|4993639|4993639 4994207|4994207|4994207|4994207|4994207|4994207|4994207|4994207|4994207 AGCTTT 6mer2-7 dme-miR-79-3p 2L - 4993773 4993822 3'utr Rtnl1 FlyBase G5948.1 TCGATTTATTCAGCTTTCTTAGTTTTCATGTGACCCTTTTTAAATTAATT 10 4993813 0.9938489 7 10 115 1 1.176091259 0.266666667 0.3 0.533333333 10 0 0 15 2L:4993773-4993822 6 6.5 361 FBgn0053113 2720.043333 137.31 210.0133333 0.002389668 0.04733814 0.030950416 2 2 2 0.25 dme-miR-282-5p 6mer2-7 GAGGCT 2L 5010334 5010339 - 2L_5010334_5010339_- 0.839260145 0.852359693 0.845809919 0.009262816 Tfb5 FBtr0301130 5009929 5010486 2L - 5010315 5010362 3'utr Tfb5 FlyBase G7669.1 AGCGGCGTGCCCGCAAAGCCTTGGAGGCTCTGGAGCAGGACAACTACC 6 5010341 0.931640874 2 6 21 1 0.77815125 0.333333333 0 0 6 0 0 6 2L:5010315-5010362 6 Tfb5 FBtr0301130 5009929 5010486 GAGGCT 6mer2-7 dme-miR-282-5p 2L - 5010322 5010362 3'utr Tfb5 FlyBase G5954.1 AGCGGCGTGCCCGCAAAGCCTTGGAGGCTCTGGAGCAGGAC 5 5010341 0.747334656 2 5 14 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 2L:5010322-5010362 6 5 362 FBgn0265968 206.6566667 30.92333333 47.31 0.024194719 0.161690202 0.105685902 2 2 2 0.25 dme-miR-92b-3p 8mer-m1 GTGCAATT 2L 5072544 5072551 - 2L_5072544_5072551_- 0.550941227 0.38717851 0.469059868 0.115797716 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 2L - 5072517 5072647 3'utr pgant5 FlyBase G7737.1 ATTTTTAAAATCGATTATGTGTGACGAACCCATAGTTATAGAGAAACGACGATATATACACATACGGCAAAATAGCAACTATTTTAACTGGTGACGGTGCAATTTTTAATTAACATTTAAAATGAAACAGG 19 5072575 0.97653 11 18 121 0.947368421 1.255272505 0.105263158 0 0 19 1 0 18 2L:5072517-5072647 8 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 GTGCAATT 8mer-m1 dme-miR-92b-3p 2L - 5072534 5072605 3'utr pgant5 FlyBase G6028.1 GAAACGACGATATATACACATACGGCAAAATAGCAACTATTTTAACTGGTGACGGTGCAATTTTTAATTAAC 11 5072545 0.979459481 7 9 64 0.833333333 1.176091259 0.166666667 0.454545455 0.666666667 11 3 0 15 2L:5072534-5072605 8 4.5 363 FBgn0031681 2245.746667 62.23 95.52 0.002003788 0.07231239 0.047110553 24 -6 9 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA 2L 5072906 5072913 - 2L_5072906_5072913_- 0.599669217 0.624693682 0.61218145 0.017694994 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 2L - 5072884 5073118 3'utr pgant5 FlyBase G7740.1 AAAGAAAAAAAAATCTCTCAAAATTGCACGCATATCATAAATACAGTGTAAAAATATATATATAAGCTACATTCAAACGAGAACTAAACAAAAACAATGTAAATATGATTAATGTAGCTATTAAAAATATACATTTAAATAAAATATCTATGTAGTACCTATATGATATACACATATGCAAAGCAAGCAAAACTGTACTATAAATTGCATTTAGTTCTAGGCTTAACGTTAAGTT 55 5072914 0.988669298 20 47 441 0.867647059 1.770852012 0.058823529 0.218181818 0.367647059 55 9 0 59 2L:5072884-5073118 8 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 TGCATTTA 8mer-A1 dme-miR-277-3p 2L - 5072888 5072978 3'utr pgant5 FlyBase G6029.1 AAAATATCTATGTAGTACCTATATGATATACACATATGCAAAGCAAGCAAAACTGTACTATAAATTGCATTTAGTTCTAGGCTTAACGTTA 22 5072914 0.930655179 7 22 178 1 1.531478917 0 0.409090909 0.617647059 22 0 0 34 2L:5072888-5072978 8 22.5 364 FBgn0031681 2245.746667 62.23 95.52 0.01001894 0.361561948 0.235552764 1 1 1 0.25 dme-miR-252-5p 6mer3-8 GTACTT 2L 5073313 5073318 - 2L_5073313_5073318_- 0.999652692 0.997343078 0.998497885 0.001633134 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 2L - 5073267 5073338 3'utr pgant5 FlyBase G7742.2 TGACATTCCTAGCTAGAATTGTACTTGAGAAAATTTACGTTTGTTTTGTTTTAATTTTACCTTAAGTCACTT 18 5073304 0.797940764 5 15 140 0.952380952 1 0.142857143 0.111111111 0.238095238 18 0 1 20 2L:5073267-5073338 6 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 GTACTT 6mer3-8 dme-miR-252-5p 2L - 5073291 5073329 3'utr pgant5 FlyBase G6030.1 TAGCTAGAATTGTACTTGAGAAAATTTACGTTTGTTTTG 9 5073304 0.693871085 4 7 70 0.894736842 1.230448921 0.578947368 0.666666667 0.842105263 9 2 0 17 2L:5073291-5073329 6 7 365 FBgn0031681 2245.746667 62.23 95.52 0.003117003 0.112485939 0.073283082 -14 -14 -14 0.25 dme-miR-277-3p 7mer-A1 GCATTTA 2L 5073486 5073492 - 2L_5073486_5073492_- 0.822176641 0.812482442 0.817329542 0.006854835 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 2L - 5073470 5073514 3'utr pgant5 FlyBase G7744.2 TCGACCAAGTACCAATAAATTGGCATTTAACTGACGTTTTGTGCT 38 5073494 0.766249955 6 36 262 0.934782609 1.633468456 0.152173913 0.210526316 0.347826087 38 3 0 43 2L:5073470-5073514 7 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 GCATTTA 7mer-A1 dme-miR-277-3p 2L - 5073470 5073518 3'utr pgant5 FlyBase G6031.1 AGCTTCGACCAAGTACCAATAAATTGGCATTTAACTGACGTTTTGTGCT 30 5073494 0.809947269 4 29 212 1 1.653212514 0 0.266666667 0.511111111 30 0 0 45 2L:5073470-5073518 7 30 366 FBgn0031681 2245.746667 62.23 95.52 0.013358586 0.482082597 0.314070352 2 2 2 0.25 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 2L 5186355 5186361 + 2L_5186355_5186361_+ 0.810644255 0.798105737 0.804374996 0.008866129 Msp300 FBtr0303384 5186161 5186528 2L + 5186320 5186376 3'utr Msp300 FlyBase G1951.1 AAACGCATCCAATAGGCTTATGTTTTGAGTTTGTATACCTGAACGAAAAAGTTACTA 17 5186353 0.979338163 8 16 113 0.958333333 1.361727836 0.083333333 0.235294118 0.458333333 17 1 0 23 2L:5186320-5186376 7 Msp300 FBtr0303384 5186161 5186528 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2L + 5186323 5186370 3'utr Msp300 FlyBase G1537.1 CGCATCCAATAGGCTTATGTTTTGAGTTTGTATACCTGAACGAAAAAG 8 5186353 0.974249724 5 8 50 1 1.113943352 0.153846154 0.5 0.692307692 8 0 0 13 2L:5186323-5186370 7 9.5 367 FBgn0261836 15716.32333 95.7 146.9 0.000604467 0.099268548 0.064669843 2 2 2 0.25 dme-miR-980-5p 7mer-m1 AAAAACT 2L 5205844 5205850 + 2L_5205844_5205850_+ 0.72963334 0.765179473 0.747406407 0.025134959 Msp300 FBtr0303388|FBtr0303385|FBtr0303387|FBtr0332405 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 2L + 5205828 5205871 3'utr Msp300 FlyBase G2009.1 ACGTATATGATCCCAAAAAAACTATAGAGAACCCAAACATTTTG 8 5205834 0.933032584 5 7 25 0.9 0.954242509 0.1 0.125 0.3 8 1 0 9 2L:5205828-5205871 7 Msp300 FBtr0332405|FBtr0303385|FBtr0303387|FBtr0303388 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 AAAAACT 7mer-m1 dme-miR-980-5p 2L + 5205797 5205851 3'utr Msp300 FlyBase G1587.1 CAGCAAACAATTTATATATTCATATATACCCACGTATATGATCCCAAAAAAACTA 8 5205835 0.975254642 7 7 50 0.923076923 1.079181246 0 0.5 0.692307692 8 1 0 12 2L:5205797-5205851 7 6 368 FBgn0261836 15716.32333 95.7 146.9 0.000381769 0.062695925 0.040844112 10 9 9.5 0.25 dme-bantam-3p 8mer-A1 TGATCTCA 2L 5206021 5206028 + 2L_5206021_5206028_+ 0.628653357 0.627767265 0.628210311 0.000626567 Msp300 FBtr0303388|FBtr0303385|FBtr0303387|FBtr0332405 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 2L + 5206011 5206052 3'utr Msp300 FlyBase G2011.1 TCGCAGGATATGATCTCAAGTTCCTGCTGCCAGCGATGGGCT 9 5206020 0.96282156 5 9 49 1 1.113943352 0.153846154 0.333333333 0.538461538 9 0 0 13 2L:5206011-5206052 8 Msp300 FBtr0332405|FBtr0303385|FBtr0303387|FBtr0303388 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 TGATCTCA 8mer-A1 dme-bantam-3p 2L + 5205999 5206056 3'utr Msp300 FlyBase G1589.1 CGTGGAACATTTTCGCAGGATATGATCTCAAGTTCCTGCTGCCAGCGATGGGCTAGAA 13 5206019 0.84509398 8 13 77 1 1.146128036 0.5 0.076923077 0.142857143 13 0 0 14 2L:5205999-5206056 8 10.5 369 FBgn0261836 15716.32333 95.7 146.9 0.000668095 0.109717868 0.071477195 1 2 1.5 0.25 dme-miR-12-5p 7mer-A1 ATACTCA 2L 5206385 5206391 + 2L_5206385_5206391_+ 0.766144734 0.822800133 0.794472434 0.040061418 Msp300 FBtr0303388|FBtr0303385|FBtr0303387|FBtr0332405 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 2L + 5206368 5206419 3'utr Msp300 FlyBase G2016.1 CATTTCAAGCATTCCTGATACTCATTTCCAAATTACCAATAGACATTGACCA 48 5206382 0.981900934 5 46 343 0.983870968 1.785329835 0 0.229166667 0.403225806 48 1 0 61 2L:5206368-5206419 7 Msp300 FBtr0332405|FBtr0303385|FBtr0303387|FBtr0303388 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 ATACTCA 7mer-A1 dme-miR-12-5p 2L + 5206369 5206432 3'utr Msp300 FlyBase G1594.1 ATTTCAAGCATTCCTGATACTCATTTCCAAATTACCAATAGACATTGACCATCGAAGCCAGCTC 37 5206382 0.987366102 7 29 263 0.804347826 0.966141733 0.065217391 0.189189189 0.347826087 37 6 3 37 2L:5206369-5206432 7 40.5 370 FBgn0261836 15716.32333 95.7 146.9 0.002576939 0.423197492 0.275697754 3 3 3 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 5206966 5206971 + 2L_5206966_5206971_+ 0.737750222 0.733019336 0.735384779 0.003345251 Msp300 FBtr0303388|FBtr0303385|FBtr0303387|FBtr0332405 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 2L + 5206929 5206996 3'utr Msp300 FlyBase G2019.3 ATGTAGCATTTTAAGATTTCCTTTCTTGTGAACAACTGTACCTTTATATGCATTATGATTATTAAAAA 755 5206965 0.851126469 20 736 5897 0.982824427 2.167739185 0.055343511 0.274172185 0.477099237 755 12 6 1030 2L:5206929-5206996 6 Msp300 FBtr0332405|FBtr0303385|FBtr0303387|FBtr0303388 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 5206929 5206996 3'utr Msp300 FlyBase G1599.2 ATGTAGCATTTTAAGATTTCCTTTCTTGTGAACAACTGTACCTTTATATGCATTATGATTATTAAAAA 587 5206965 0.849661248 17 574 4508 0.982121573 2.915927212 0.063170441 0.313458262 0.519666269 587 15 0 824 2L:5206929-5206996 6 599 371 FBgn0261836 15716.32333 95.7 146.9 0.03811324 6.259143156 4.077603812 1 1 1 0.25 dme-miR-92b-3p 6mer3-8 GTGCAA 2L 5219535 5219540 - 2L_5219535_5219540_- 0.999947988 0.999997717 0.999972852 3.51E-05 tkv FBtr0079088|FBtr0079086|FBtr0079087|FBtr0079089 5218998|5218998|5218998|5218998 5220092|5220092|5220092|5220092 2L - 5219488 5219601 3'utr tkv FlyBase G7773.1 AGAACATGTCCTTATATGTTTTGTTTGTATCTAGTGTTTAAGTGTAAACTTTGCAGACTTTGTGCAAGTAAATGCTGCCTTTTGTAAAATCCACGGAATTAGTTGCCTTAAGAC 42 5219521 0.987873475 14 37 330 0.894736842 1.008600172 0.298245614 0.285714286 0.473684211 42 2 4 51 2L:5219488-5219601 6 tkv FBtr0079087|FBtr0079089|FBtr0079088|FBtr0079086 5218998|5218998|5218998|5218998 5220092|5220092|5220092|5220092 GTGCAA 6mer3-8 dme-miR-92b-3p 2L - 5219509 5219573 3'utr tkv FlyBase G6049.1 ATCTAGTGTTTAAGTGTAAACTTTGCAGACTTTGTGCAAGTAAATGCTGCCTTTTGTAAAATCCA 19 5219522 0.686550624 8 18 164 0.92 1.361727836 0.32 0.263157895 0.44 19 2 0 23 2L:5219509-5219573 6 24.5 372 FBgn0003716 310.6566667 12.88 19.87333333 0.0788652 1.902173913 1.232807783 -19 -18 -18.5 0.25 dme-miR-965-3p 7mer-m8 TACGCTT 2L 5219658 5219664 - 2L_5219658_5219664_- 0.619329505 0.620173669 0.619751587 0.00059694 tkv FBtr0079088|FBtr0079086|FBtr0079087|FBtr0079089 5218998|5218998|5218998|5218998 5220092|5220092|5220092|5220092 2L - 5219651 5219678 3'utr tkv FlyBase G7774.1 TGTGCCAGCTTTTGTACGCTTTAACTAA 11 5219665 0.663212313 5 10 91 0.909090909 1 0.272727273 0 0 11 1 0 10 2L:5219651-5219678 7 tkv FBtr0079087|FBtr0079089|FBtr0079088|FBtr0079086 5218998|5218998|5218998|5218998 5220092|5220092|5220092|5220092 TACGCTT 7mer-m8 dme-miR-965-3p 2L - 5219651 5219676 3'utr tkv FlyBase G6050.1 TGCCAGCTTTTGTACGCTTTAACTAA 5 5219664 0.629195756 4 5 37 1 0.903089987 0 0.6 0.75 5 0 0 8 2L:5219651-5219676 7 7.5 373 FBgn0003716 310.6566667 12.88 19.87333333 0.024142408 0.582298137 0.377390138 1 0 0.5 0.25 dme-miR-283-5p 7mer-m8 TGATATT 2L 5272044 5272050 - 2L_5272044_5272050_- 0.576719159 0.573355627 0.575037393 0.002378424 Bsg25D FBtr0079085|FBtr0310625|FBtr0310624|FBtr0302568|FBtr0079084 5271726|5271726|5271726|5271726|5271726 5272677|5272677|5272677|5272677|5272677 2L - 5272032 5272091 3'utr Bsg25D FlyBase G7786.2 TATTGATAGAGAAAATGGAAATGAGCGTAAAAAATGATCTATGATATTGATATTGATGTA 69 5272076 0.940221704 8 66 327 0.951807229 1.897627091 0.493975904 0.144927536 0.289156627 69 4 0 79 2L:5272032-5272091 7 Bsg25D FBtr0302568|FBtr0079084|FBtr0310624|FBtr0310625|FBtr0079085 5271726|5271726|5271726|5271726|5271726 5272677|5272677|5272677|5272677|5272677 TGATATT 7mer-m8 dme-miR-283-5p 2L - 5272030 5272100 3'utr Bsg25D FlyBase G6059.1 TGTTAATTTTATTGATAGAGAAAATGGAAATGAGCGTAAAAAATGATCTATGATATTGATATTGATGTAAT 66 5272056 0.959924864 7 64 340 0.989583333 1.977723605 0.416666667 0.363636364 0.5625 66 1 0 95 2L:5272030-5272100 7 40.5 374 FBgn0000228 499.75 17.04333333 26.20333333 0.08104052 2.376295717 1.545604885 26 6 16 0.25 dme-bantam-3p 6mer2-7 GATCTC 2L 5310099 5310104 + 2L_5310099_5310104_+ 0.998867087 0.999999999 0.999433543 0.000801081 vri FBtr0079071|FBtr0342936|FBtr0079070|FBtr0346579|FBtr0300020 5309719|5309719|5309719|5309719|5309719 5310996|5310996|5310625|5311223|5310610 2L + 5310045 5310223 3'utr vri FlyBase G2053.1 ATGTTTATCTATCCACTGTATTGAGTCTTGTAATCGTGAATGTTTAACTATATAGATCTCGTCAACTCGGAGCTAAAAAAAAATCCTTAGGGTCAGCCCAAAAGAATTTCTAATTTAACCTGTTTGTTGTATACACACAAGCTATTTGTTTGCATAGCTAGCTGGTGACCTGCGATGAG 122 5310096 0.927326496 32 104 917 0.854304636 1.156347201 0.178807947 0.18852459 0.344370861 122 14 8 129 2L:5310045-5310223 6 vri FBtr0346579|FBtr0300020|FBtr0342936|FBtr0079070|FBtr0079071 5309719|5309719|5309719|5309719|5309719 5311223|5310610|5310996|5310625|5310996 GATCTC 6mer2-7 dme-bantam-3p 2L + 5310036 5310186 3'utr vri FlyBase G1632.1 TCTGTGTGTATGTTTATCTATCCACTGTATTGAGTCTTGTAATCGTGAATGTTTAACTATATAGATCTCGTCAACTCGGAGCTAAAAAAAAATCCTTAGGGTCAGCCCAAAAGAATTTCTAATTTAACCTGTTTGTTGTATACACACAAGC 73 5310106 0.987533168 21 68 605 0.946902655 2.029383778 0.061946903 0.369863014 0.592920354 73 6 0 107 2L:5310036-5310186 6 59.5 375 FBgn0016076 178.9966667 5.846666667 8.973333333 0.332408425 10.17673888 6.630757801 3 -7 -2 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2L 5316842 5316848 - 2L_5316842_5316848_- 0.820723343 0.821315669 0.821019506 0.00041889 Ncoa6 FBtr0329969|FBtr0307041|FBtr0307040 5315424|5315288|5316236 5317209|5317812|5317812 2L - 5316764 5316874 3'utr Ncoa6 FlyBase G7816.1 AAAATCCACCCATTGGAAATGATTTGCTAGTCATGTGAAACAGGCAATTTAATGTATAGCTCAGAAGATGAAATTTGAACAAATTAGTTGAGTAACGTATTTGAGAAGCTC 165 5316851 0.985201458 14 156 1263 0.936585366 1.806179974 0.224390244 0.206060606 0.36097561 165 11 2 192 2L:5316764-5316874 7 Ncoa6 FBtr0307040|FBtr0307041|FBtr0329969 5316236|5315288|5315424 5317812|5317812|5317209 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 5316829 5316886 3'utr Ncoa6 FlyBase G6078.2 TTACTCCCCAAAAAAATCCACCCATTGGAAATGATTTGCTAGTCATGTGAAACAGGCA 124 5316851 0.655334878 10 119 918 0.975247525 2.294466226 0.267326733 0.451612903 0.663366337 124 5 0 197 2L:5316829-5316886 7 134 376 FBgn0031698 1745.396667 21.13666667 32.68333333 0.076773379 6.339694055 4.099949006 3 3 3 0.25 dme-miR-33-5p 6mer2-7 AATGCA 2L 540306 540311 + 2L_540306_540311_+ 0.844740504 0.60963287 0.727186687 0.166246178 ush FBtr0333012|FBtr0329895|FBtr0078063|FBtr0310027|FBtr0333013 539955|540018|539955|539955|539955 540532|540560|540560|540532|540532 2L + 540219 540355 3'utr ush FlyBase G853.1 ATATACAGTACACCTAAAGGAATAACACATAGATACTTAGGTACATTAATTTAGGCGCATACCCATTAAGTGGGAACCATGACATATAATGCATGCCAAAGCTTACCACTTAGACAGAAATTAAATTGAGGGCGAGA 156 540312 0.966895551 12 145 782 0.943502825 1.523746467 0.107344633 0.128205128 0.231638418 156 6 4 167 2L:540219-540355 6 ush FBtr0310027|FBtr0333013|FBtr0329895|FBtr0078063|FBtr0333012 539955|539955|540018|539955|539955 540532|540532|540560|540560|540532 AATGCA 6mer2-7 dme-miR-33-5p 2L + 540261 540523 3'utr ush FlyBase G683.1 ACATTAATTTAGGCGCATACCCATTAAGTGGGAACCATGACATATAATGCATGCCAAAGCTTACCACTTAGACAGAAATTAAATTGAGGGCGAGAAACTACAAGTTTGCAATGGTCTGCGGAGTAGAAGGAGGCGAAGTATTCCAATGTAGATCCAATACTATAATGTAAATTACTCGCTGTTCCCCATAAAGCGAGCAATTCTAACTGTGTAATTTAAATGAGTACATTATTTATTAAGTGTGTGCGACAATAAAAGTAATT 151 540312 0.964665094 28 146 765 0.978070175 2.348304863 0.105263158 0.373333333 0.587719298 150 5 0 223 2L:540261-540523 6 117 377 FBgn0003963 1303.193333 29.53666667 45.16666667 0.089779465 3.961178197 2.590405904 -6 -6 -6 0.25 dme-miR-304-5p 6mer2-7 GAGATT 2L 5545619 5545624 + 2L_5545619_5545624_+ 0.99560651 0.815819797 0.905713154 0.127128395 Lam FBtr0307058|FBtr0079100|FBtr0307059|FBtr0346460 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 2L + 5545565 5545631 3'utr Lam FlyBase G2114.1 AAGCACACACGAAGATCATAATTTAGAACCCAAAAACACACACACCGAGGTACAGAGATTTATTATT 14 5545628 0.965716974 6 13 66 0.882352941 1.176091259 0.058823529 0.214285714 0.352941176 14 2 0 15 2L:5545565-5545631 6 Lam FBtr0307059|FBtr0346460|FBtr0307058|FBtr0079100 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 GAGATT 6mer2-7 dme-miR-304-5p 2L + 5545601 5545635 3'utr Lam FlyBase G1680.2 CACACACACCGAGGTACAGAGATTTATTATTCAGC 8 5545627 0.968723613 4 7 43 0.916666667 1.041392685 0 0.375 0.583333333 8 1 0 11 2L:5545601-5545635 6 9 378 FBgn0002525 6943.616667 266.97 409.4166667 0.001296155 0.033711653 0.021982495 -9 -8 -8.5 0.25 dme-miR-252-5p 7mer-m8 GTACTTA 2L 5545939 5545945 + 2L_5545939_5545945_+ 0.507089139 0.538168936 0.522629038 0.021976737 Lam FBtr0307058|FBtr0079100|FBtr0307059|FBtr0346460 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 2L + 5545924 5546007 3'utr Lam FlyBase G2118.1 AACAATATTTTCGATGTACTTACGCTCCACCTACATATTTAGTAAATTAGTTTTTAAGCTATATCCCAGATAAACCAGTCGACG 11 5545938 0.985453426 6 10 91 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 2L:5545924-5546007 7 Lam FBtr0307059|FBtr0346460|FBtr0307058|FBtr0079100 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 GTACTTA 7mer-m8 dme-miR-252-5p 2L + 5545927 5545958 3'utr Lam FlyBase G1684.1 AATATTTTCGATGTACTTACGCTCCACCTACA 5 5545940 0.966843465 2 4 29 1 0.84509804 0 0.2 0.428571429 5 0 0 7 2L:5545927-5545958 7 6 379 FBgn0002525 6943.616667 266.97 409.4166667 0.000864103 0.022474435 0.014654997 1 -1 0 0.25 dme-miR-980-5p 7mer-m1 AAAAACT 2L 5546538 5546544 + 2L_5546538_5546544_+ 0.675403859 0.718215756 0.696809807 0.030272585 Lam FBtr0307058|FBtr0079100|FBtr0307059|FBtr0346460 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 2L + 5546421 5546574 3'utr Lam FlyBase G2122.1 ACGAAAGAAAATGGAAGTACACGTAGCGGCTCAGCGATCCGTCGCATTTTTTATGGGTGGGCGTGGTCGCGTTTTACGCCGGCCAAACAAATGCAACGCCCACACAGACTATTATACAAAAACTGATGAATACAACTAAATTTTAAGTACATCT 68 5546547 0.999986213 15 61 384 0.904109589 1.819543936 0.04109589 0.073529412 0.136986301 68 7 0 66 2L:5546421-5546574 7 Lam FBtr0307059|FBtr0346460|FBtr0307058|FBtr0079100 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 AAAAACT 7mer-m1 dme-miR-980-5p 2L + 5546512 5546571 3'utr Lam FlyBase G1690.1 TGCAACGCCCACACAGACTATTATACAAAAACTGATGAATACAACTAAATTTTAAGTACA 45 5546547 0.970508596 8 42 243 0.938461538 1.484299839 0.015384615 0.377777778 0.569230769 45 3 1 61 2L:5546512-5546571 7 34.5 380 FBgn0002525 6943.616667 266.97 409.4166667 0.004968592 0.129228003 0.084266232 -9 -9 -9 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 2L 5768512 5768517 - 2L_5768512_5768517_- 0.727937925 0.993551622 0.860744774 0.187817248 CG9171 FBtr0332038|FBtr0301235|FBtr0301236|FBtr0301234|FBtr0332039 5767590|5767000|5768251|5768251|5767590 5769315|5769315|5769315|5769315|5769315 2L - 5768478 5768629 3'utr CG9171 FlyBase G7904.1 ATTGGATATTCTTTTCAAAATACTCAAAAAGAGAAATTGAGAGCAACATTATTTTCGTATACCGGGGCGAGTTTCCTAGACATCAGCAAAACAAACAGTCTTACCACTTTTTTGTGTTTTATATATTTCCGCATTAAAGGCATAGATTAAAC 31 5768518 0.986638151 12 30 256 0.96875 1.491361694 0.03125 0.032258065 0.0625 31 1 0 31 2L:5768478-5768629 6 CG9171 FBtr0332039|FBtr0301236|FBtr0301234|FBtr0332038|FBtr0301235 5767590|5768251|5768251|5767590|5767000 5769315|5769315|5769315|5769315|5769315 TGTGTT 6mer3-8 dme-miR-317-3p 2L - 5768495 5768533 3'utr CG9171 FlyBase G6144.1 AGTCTTACCACTTTTTTGTGTTTTATATATTTCCGCATT 5 5768518 0.982122955 4 5 69 1 1 0 0.6 0.8 5 0 0 10 2L:5768495-5768533 6 6.5 381 FBgn0031738 813.1933333 26.58333333 40.79333333 0.007993179 0.244514107 0.159339761 1 1 1 0.25 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 5800817 5800824 - 2L_5800817_5800824_- 0.598405516 0.611496577 0.604951047 0.009256806 CG14005 FBtr0079160 5800515 5800869 2L - 5800700 5800859 coding-3'utr CG14005 FlyBase G7919.1 TAGCACCACGTGGTAAGGACATTGTATGACAGCTTTAGCTTTAAGTTGGGAATAGAGTCGCGGCGCTCGACCCTGTGTATGTTTTTCAATTCGTTCCTTTCTCAGACACAGATGTCTAATTCACTCGACGTACAAAGCAGCAGCATAGCGAACCGAAGAT 105 5800825 0.999996235 14 100 964 0.96124031 1.792391689 0.186046512 0.19047619 0.341085271 105 4 1 124 2L:5800700-5800859 8 CG14005 FBtr0079160 5800515 5800869 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 5800788 5800870 stop_codon CG14005 FlyBase G6159.1 ATCCCGACTACTAGCACCACGTGGTAAGGACATTGTATGACAGCTTTAGCTTTAAGTTGGGAATAGAGTCGCGGCGCTCGACC 55 5800825 0.989660082 6 52 502 0.957746479 1.832508913 0.183098592 0.2 0.38028169 55 3 0 68 2L:5800788-5800870 8 67 382 FBgn0031739 237 20.57 31.17666667 0.282700422 3.257170637 2.149043088 1 1 1 0.25 dme-bantam-3p 6mer3-8 TGATCT 2L 5955067 5955072 + 2L_5955067_5955072_+ 0.676206661 0.752292154 0.714249407 0.053800573 CG9044 FBtr0333231|FBtr0273412 5955000|5955000 5955235|5955235 2L + 5955016 5955162 3'utr CG9044 FlyBase G2192.1 TAGAAAATTGAATATAGCCTGTACCAATTATTGTGCAAAGTTTAAAATTGTTGATCTTAATTGACTATGTTATTTAATGTCAGATTAGTTTTATTAACTTAGGCTAGAGCTTTCAATCAATAAGAAATGGTGCTGTACCACGATTTA 136 5955065 0.885226338 25 129 1131 0.935294118 1.50242712 0.123529412 0.205882353 0.364705882 136 7 4 159 2L:5955016-5955162 6 CG9044 FBtr0333231|FBtr0273412 5955000|5955000 5955235|5955235 TGATCT 6mer3-8 dme-bantam-3p 2L + 5955016 5955095 3'utr CG9044 FlyBase G1739.1 TAGAAAATTGAATATAGCCTGTACCAATTATTGTGCAAAGTTTAAAATTGTTGATCTTAATTGACTATGTTATTTAATGT 79 5955065 0.840761897 12 76 675 0.972972973 1.73239376 0.171171171 0.316455696 0.513513514 79 2 1 108 2L:5955016-5955095 6 62.5 383 FBgn0031752 511 13.98 21.38 0.122309198 4.470672389 2.923292797 2 2 2 0.25 dme-miR-184-5p 8mer-A1 TGATAAGA 2L 5973473 5973480 - 2L_5973473_5973480_- 0.552532013 0.593007031 0.572769522 0.028620147 chic FBtr0079235|FBtr0309213|FBtr0079234|FBtr0079236 5972898|5973005|5972898|5972113 5973576|5973576|5973576|5973576 2L - 5973412 5973656 stop_codon chic FlyBase G7933.1 ACGAGGATCCCGTTCAGCCCCAGCAGGCCGCTTCCGTGGTAGAGAAACTTGGAGATTATCTGATTACTTGCGGGTACTAGGAGAATAGATCAACACAAACACCCCCATCAACCACAACAACAACAACACACACACACCAACAACTACAACTACAACAACAACAGCAGCAACAAATTTGATAAGAGCGAACCGTAAATGAACTAATAACACATAAAAAGTAATTATTAATATTTAAATTTATGGGA 90 5973481 0.964330644 25 84 434 0.935185185 1.305351369 0.259259259 0.166666667 0.305555556 90 3 4 101 2L:5973412-5973656 8 chic FBtr0079234|FBtr0079236|FBtr0079233|FBtr0309212|FBtr0079235|FBtr0309213 5972898|5972113|5973201|5973322|5972898|5973005 5973576|5973576|5973576|5973576|5973576|5973576 TGATAAGA 8mer-A1 dme-miR-184-5p 2L - 5973440 5973496 3'utr chic FlyBase G6171.1 ACAGCAGCAACAAATTTGATAAGAGCGAACCGTAAATGAACTAATAACACATAAAAA 19 5973481 0.932080192 7 19 74 1 1.431363764 0.148148148 0.263157895 0.481481481 19 0 0 27 2L:5973440-5973496 8 21 384 FBgn0000308 17707.58333 1966.28 3025.8 0.001185933 0.010680066 0.006940313 1 1 1 0.25 dme-miR-317-3p 7mer-m8 TGTGTTC 2L 5990208 5990214 - 2L_5990208_5990214_- 0.645935342 0.650581819 0.64825858 0.003285572 lid FBtr0307071|FBtr0345336 5989461|5989398 5990641|5990641 2L - 5990139 5990277 3'utr lid FlyBase G7940.1 AATTTTATAATATATTTTACCATTACCTGCTATTCTTAGTTTTTGTTAATTTAATTCACTTTTTGTGTTCGCCTCTCGAGTTTTGGTTCAGTGCGCACGCAAAGTTTTCTTACGTTTTATTTGACTTTTTCCTTTAATC 197 5990215 0.946594863 15 190 2416 0.969957082 1.655138435 0.060085837 0.137055838 0.270386266 197 3 4 226 2L:5990139-5990277 7 lid FBtr0307071|FBtr0345336 5989461|5989398 5990641|5990641 TGTGTTC 7mer-m8 dme-miR-317-3p 2L - 5990196 5990271 3'utr lid FlyBase G6180.1 ATAATATATTTTACCATTACCTGCTATTCTTAGTTTTTGTTAATTTAATTCACTTTTTGTGTTCGCCTCTCGAGTT 119 5990215 0.827908948 7 111 1396 0.943396226 1.574031268 0.006289308 0.277310924 0.459119497 119 6 3 150 2L:5990196-5990271 7 72 385 FBgn0031759 1960.226667 33.73333333 51.87 0.036730446 2.134387352 1.388085599 1 1 1 0.25 dme-miR-33-5p 7mer-A1 AATGCAA 2L 5990345 5990351 - 2L_5990345_5990351_- 0.781489494 0.700666734 0.741078114 0.05715035 lid FBtr0307071|FBtr0345336 5989461|5989398 5990641|5990641 2L - 5990331 5990378 3'utr lid FlyBase G7942.1 GGATTAATAATTAAGCAAAAGATATGAAATGCAAACAAAGCAACACAA 13 5990350 0.90985326 5 13 37 1 1.204119983 0.25 0.230769231 0.375 13 0 0 16 2L:5990331-5990378 7 lid FBtr0307071|FBtr0345336 5989461|5989398 5990641|5990641 AATGCAA 7mer-A1 dme-miR-33-5p 2L - 5990335 5990371 3'utr lid FlyBase G6181.1 TAATTAAGCAAAAGATATGAAATGCAAACAAAGCAAC 6 5990354 0.935340308 2 5 16 0.909090909 1 0.181818182 0.5 0.727272727 6 1 0 10 2L:5990335-5990371 7 6.5 386 FBgn0031759 1960.226667 33.73333333 51.87 0.003315943 0.192687747 0.125313283 -1 3 1 0.25 dme-miR-1008-3p 8mer-A1 AGCTGTGA 2L 6002422 6002429 + 2L_6002422_6002429_+ 0.372951709 0.457373039 0.415162374 0.059694874 Tsp26A FBtr0307300|FBtr0332600|FBtr0113024 6001736|6001736|6001736 6003738|6003738|6003738 2L + 6002409 6002448 3'utr Tsp26A FlyBase G2221.1 TATCTTGAAATGCAGCTGTGATATATTTTTAAAGAAAAGT 57 6002434 0.705512977 10 46 493 0.825 1.51851394 0.1125 0.263157895 0.475 57 13 1 66 2L:6002409-6002448 8 Tsp26A FBtr0332600|FBtr0113024|FBtr0307300 6001736|6001736|6001736 6003738|6003738|6003738 AGCTGTGA 8mer-A1 dme-miR-1008-3p 2L + 6002408 6002452 3'utr Tsp26A FlyBase G1771.1 TTATCTTGAAATGCAGCTGTGATATATTTTTAAAGAAAAGTATAG 52 6002435 0.961990547 11 47 484 0.9375 1.875061263 0.125 0.403846154 0.6125 52 5 0 75 2L:6002408-6002452 8 54.5 387 FBgn0031760 374.3466667 15.47666667 23.65666667 0.145586978 3.52143011 2.303790334 -12 -13 -12.5 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 6002839 6002844 + 2L_6002839_6002844_+ 0.999149722 0.99946801 0.999308866 0.000225072 Tsp26A FBtr0307300|FBtr0332600|FBtr0113024 6001736|6001736|6001736 6003738|6003738|6003738 2L + 6002817 6002860 3'utr Tsp26A FlyBase G2225.1 AGGAAAACATTGATTCGCTCTTGTACCTTTTTAAATCTATATTG 39 6002838 0.710189588 6 39 430 1 1.662757832 0.043478261 0.179487179 0.304347826 39 0 0 46 2L:6002817-6002860 6 Tsp26A FBtr0332600|FBtr0113024|FBtr0307300 6001736|6001736|6001736 6003738|6003738|6003738 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 6002825 6002861 3'utr Tsp26A FlyBase G1773.1 ATTGATTCGCTCTTGTACCTTTTTAAATCTATATTGC 26 6002838 0.72004263 5 26 302 1 1.544068044 0 0.307692308 0.485714286 26 0 0 35 2L:6002825-6002861 6 32.5 388 FBgn0031760 374.3466667 15.47666667 23.65666667 0.086817923 2.099935387 1.373819924 1 1 1 0.25 dme-miR-980-3p 8mer-A1 GGCAGCTA 2L 6003357 6003364 + 2L_6003357_6003364_+ 0.619100926 0.627897374 0.62349915 0.006220065 Tsp26A FBtr0307300|FBtr0332600|FBtr0113024 6001736|6001736|6001736 6003738|6003738|6003738 2L + 6003307 6003382 3'utr Tsp26A FlyBase G2227.1 TGCCCAAAAATCTTGTATGTACACTTGCAACTGAGCAATTGGCCAGATGTGGCAGCTAATACACTTTTTGGATATG 104 6003356 0.966414869 6 101 545 0.977777778 2.120573931 0.007407407 0.230769231 0.407407407 104 3 0 132 2L:6003307-6003382 8 Tsp26A FBtr0332600|FBtr0113024|FBtr0307300 6001736|6001736|6001736 6003738|6003738|6003738 GGCAGCTA 8mer-A1 dme-miR-980-3p 2L + 6003303 6003380 3'utr Tsp26A FlyBase G1775.1 AATATGCCCAAAAATCTTGTATGTACACTTGCAACTGAGCAATTGGCCAGATGTGGCAGCTAATACACTTTTTGGATA 58 6003356 0.965372589 4 57 307 0.988505747 1.934498451 0 0.362068966 0.574712644 58 1 0 86 2L:6003303-6003380 8 79 389 FBgn0031760 374.3466667 15.47666667 23.65666667 0.211034335 5.104458324 3.3394392 1 1 1 0.25 dme-miR-277-3p 7mer-A1 GCATTTA 2L 6041268 6041274 - 2L_6041268_6041274_- 0.821656562 0.823191897 0.82242423 0.001085621 ade2 FBtr0079219|FBtr0079220|FBtr0079221 6041179|6041179|6041179 6041313|6041313|6041313 2L - 6041228 6041289 3'utr ade2 FlyBase G7995.1 TTAAATAGGTTCTTGGCATTTATGACCTGATATATCTAAATACTATATACACGAATTTGTTT 63 6041270 0.987501565 14 59 593 0.929411765 1.897627091 0.258823529 0.238095238 0.435294118 63 6 0 79 2L:6041228-6041289 7 ade2 FBtr0079219|FBtr0079220|FBtr0079221 6041179|6041179|6041179 6041313|6041313|6041313 GCATTTA 7mer-A1 dme-miR-277-3p 2L - 6041248 6041289 3'utr ade2 FlyBase G6217.1 TTAAATAGGTTCTTGGCATTTATGACCTGATATATCTAAATA 30 6041269 0.652043457 8 30 277 1 1.716003344 0.173076923 0.6 0.769230769 30 0 0 52 2L:6041248-6041289 7 45 390 FBgn0000052 854.3333333 23.79 36.27666667 0.052672649 1.891551072 1.240466783 -4 -5 -4.5 0.25 dme-miR-79-3p 6mer2-7 AGCTTT 2L 6046713 6046718 - 2L_6046713_6046718_- 0.998738217 0.790161677 0.894449947 0.147485858 slmo FBtr0343130|FBtr0079218|FBtr0299810|FBtr0079217|FBtr0112945 6046514|6046652|6046649|6046652|6046649 6047052|6047052|6047052|6047052|6047052 2L - 6046678 6046732 3'utr slmo FlyBase G8015.1 ACATAGTCAATGTAAGCTTTGTAAGCCGCCGCAGATTTCGAAGAACGAGAGGAGC 12 6046719 0.970537166 7 12 69 1 1.113943352 0 0.083333333 0.153846154 12 0 0 13 2L:6046678-6046732 6 slmo FBtr0112945|FBtr0343130|FBtr0079218|FBtr0299810|FBtr0079217 6046649|6046514|6046652|6046649|6046652 6047052|6047052|6047052|6047052|6047052 AGCTTT 6mer2-7 dme-miR-79-3p 2L - 6046686 6046728 3'utr slmo FlyBase G6233.1 AGTCAATGTAAGCTTTGTAAGCCGCCGCAGATTTCGAAGAACG 6 6046720 0.822863583 3 5 35 0.933333333 0.84509804 0.066666667 0.833333333 0.933333333 6 0 1 14 2L:6046686-6046728 6 7 391 FBgn0029161 669.6266667 62.72666667 95.86333333 0.010453586 0.111595281 0.07302062 1 2 1.5 0.25 dme-miR-305-5p 7mer-m8 AGTACAA 2L 6046966 6046972 - 2L_6046966_6046972_- 0.633592294 0.63916733 0.636379812 0.00394212 slmo FBtr0343130|FBtr0079218|FBtr0299810|FBtr0079217|FBtr0112945 6046514|6046652|6046649|6046652|6046649 6047052|6047052|6047052|6047052|6047052 2L - 6046929 6047034 3'utr slmo FlyBase G8017.1 TGCAAGGTCGCGCGGGGGCTGTTCACTAGTGAATTATTTAGATGGCGCGCGGTCGTCGTTTTAGTACAACTAATTAATCGATGGCACGATGGACATGGACAGCAAC 82 6046974 0.942682906 14 80 621 0.978947368 1.667452953 0.336842105 0.146341463 0.263157895 82 1 1 93 2L:6046929-6047034 7 slmo FBtr0112945|FBtr0343130|FBtr0079218|FBtr0299810|FBtr0079217 6046649|6046514|6046652|6046649|6046652 6047052|6047052|6047052|6047052|6047052 AGTACAA 7mer-m8 dme-miR-305-5p 2L - 6046929 6047030 3'utr slmo FlyBase G6235.1 AGGTCGCGCGGGGGCTGTTCACTAGTGAATTATTTAGATGGCGCGCGGTCGTCGTTTTAGTACAACTAATTAATCGATGGCACGATGGACATGGACAGCAAC 56 6046974 0.882109073 11 54 384 0.948051948 1.164352856 0.376623377 0.267857143 0.467532468 56 0 4 73 2L:6046929-6047030 7 40.5 392 FBgn0029161 669.6266667 62.72666667 95.86333333 0.060481462 0.645658412 0.422476442 2 2 2 0.25 dme-miR-277-3p 7mer-m8 TGCATTT 2L 6053818 6053824 + 2L_6053818_6053824_+ 0.610610109 0.521386108 0.565998109 0.063090895 CG9135 FBtr0343121 6053257 6053877 2L + 6053717 6053866 3'utr CG9135 FlyBase G2252.1 ACTACAAAACACGTAAATTAACGAACTAAGCGCATAGGTTACATATAAAAAGTATACCATGGAAAAATCCAATACCAGTTGCAACTATTAATAGTACATCATGCATTTTAATCTTATACAAAGGAATATTTAAATAAAGAGAATGTTAGT 28 6053818 0.978030085 14 26 180 0.971428571 1.230448921 0.057142857 0.178571429 0.342857143 28 0 1 34 2L:6053717-6053866 7 CG9135 FBtr0343121 6053257 6053877 TGCATTT 7mer-m8 dme-miR-277-3p 2L + 6053760 6053834 3'utr CG9135 FlyBase G1794.1 TATAAAAAGTATACCATGGAAAAATCCAATACCAGTTGCAACTATTAATAGTACATCATGCATTTTAATCTTATA 18 6053818 0.987390213 7 17 148 0.961538462 1.397940009 0 0.333333333 0.538461538 18 1 0 25 2L:6053760-6053834 7 11.5 393 FBgn0031769 791.34 43.62666667 67.18666667 0.014532312 0.263600244 0.171164914 0 0 0 0.25 dme-miR-14-3p 7mer-m8 AAGACTG 2L 6095586 6095592 + 2L_6095586_6095592_+ 0.671771661 0.671285609 0.671528635 0.000343725 Kr-h1 FBtr0344438|FBtr0344437 6095555|6095555 6096498|6096498 2L + 6095552 6095743 stop_codon Kr-h1 FlyBase G2287.1 CCTAGGGGTCCAAGGCCGATCCCCAATCAGCATTAAGACTGTCCAAACAAATTCTAACTGAAATTAGCCTAAGTTTTTTCTCTGAGGTTCGGGGTTAGGCCTGGAAAAAGAAAGCATAGAAACGTATGGATATGGCAGTGAGATAGTTTTCCAGCAGCGAAAATGAAAATGCCAAAAGTATTAAAAAAGGGA 168 6095583 0.941213682 18 157 850 0.928205128 1.78055732 0.087179487 0.160714286 0.276923077 168 12 2 181 2L:6095552-6095743 7 Kr-h1 FBtr0344437|FBtr0344438 6095555|6095555 6096498|6096498 AAGACTG 7mer-m8 dme-miR-14-3p 2L + 6095544 6095661 stop_codon Kr-h1 FlyBase G1818.1 CAAGGCCTCCTAGGGGTCCAAGGCCGATCCCCAATCAGCATTAAGACTGTCCAAACAAATTCTAACTGAAATTAGCCTAAGTTTTTTCTCTGAGGTTCGGGGTTAGGCCTGGAAAAAG 106 6095584 0.999444007 16 101 522 0.953020134 1.851258349 0.053691275 0.320754717 0.516778523 106 6 1 142 2L:6095544-6095661 7 97 394 FBgn0266450 461.9366667 12.49333333 19.07 0.209985496 7.764140875 5.086523335 3 2 2.5 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 2L 6095894 6095899 + 2L_6095894_6095899_+ 0.99999996 0.999490185 0.999745072 0.000360483 Kr-h1 FBtr0344438|FBtr0344437 6095555|6095555 6096498|6096498 2L + 6095857 6095940 3'utr Kr-h1 FlyBase G2288.1 AGTTTGGCATATACAATGTAGGTATAGTTTGTTTTCCTGTGTTGTCCACTTAGTCAAATTGCAGCAATTGGCATTATGCGTATT 17 6095899 0.990520638 11 16 166 0.954545455 1.322219295 0.181818182 0.235294118 0.409090909 17 1 0 21 2L:6095857-6095940 6 Kr-h1 FBtr0344437|FBtr0344438 6095555|6095555 6096498|6096498 TGTGTT 6mer3-8 dme-miR-317-3p 2L + 6095856 6095929 3'utr Kr-h1 FlyBase G1820.1 TAGTTTGGCATATACAATGTAGGTATAGTTTGTTTTCCTGTGTTGTCCACTTAGTCAAATTGCAGCAATTGGCA 19 6095906 0.755073136 11 18 168 1 1.397940009 0.4 0.315789474 0.48 19 0 0 25 2L:6095856-6095929 6 10.5 395 FBgn0266450 461.9366667 12.49333333 19.07 0.022730389 0.840448239 0.550603041 -5 -12 -8.5 0.25 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 6096906 6096912 - 2L_6096906_6096912_- 0.639669931 0.639253392 0.639461662 0.00029451 CG9175 FBtr0079212|FBtr0079211 6096696|6096696 6097167|6097167 2L - 6096885 6096954 3'utr CG9175 FlyBase G8041.1 TGTTTATCTCTCTAGCCACCGCAAACGAAGCCTTGCTCGTTTGGCAGCTTTGCCCGTTGTACATGATTTT 1317 6096914 0.790274106 11 1305 11776 0.987991995 2.170555059 0.350233489 0.119210326 0.226150767 1317 9 9 1481 2L:6096885-6096954 7 CG9175 FBtr0079212|FBtr0079211 6096696|6096696 6097167|6097167 GGCAGCT 7mer-m8 dme-miR-980-3p 2L - 6096889 6096958 3'utr CG9175 FlyBase G6254.1 AATTTGTTTATCTCTCTAGCCACCGCAAACGAAGCCTTGCTCGTTTGGCAGCTTTGCCCGTTGTACATGA 891 6096914 0.851952976 11 886 7867 0.995780591 3.151063253 0.319268636 0.405162738 0.627285513 891 6 0 1416 2L:6096889-6096958 7 1092 396 FBgn0031779 121.6666667 7.2 10.92 8.975342466 151.6666667 100 2 2 2 0.25 dme-miR-970-3p 6mer3-8 TCTTAT 2L 6096990 6096995 - 2L_6096990_6096995_- 0.965697067 0.960173026 0.962935047 0.003906129 CG9175 FBtr0079212|FBtr0079211 6096696|6096696 6097167|6097167 2L - 6096956 6097024 3'utr CG9175 FlyBase G8042.1 AGTGCATAGTTTGTGCCGGCTGCCTTATCTCTTATACTAATTGCAATGTTTGCTTAGTTGTATCATAAT 115 6096993 0.988423229 12 109 1002 0.954545455 1.46834733 0.207792208 0.269565217 0.454545455 115 3 4 147 2L:6096956-6097024 6 CG9175 FBtr0079212|FBtr0079211 6096696|6096696 6097167|6097167 TCTTAT 6mer3-8 dme-miR-970-3p 2L - 6096981 6097031 3'utr CG9175 FlyBase G6255.1 TAGTTTAAGTGCATAGTTTGTGCCGGCTGCCTTATCTCTTATACTAATTGC 110 6096993 0.723822713 7 105 923 0.9625 1.710399466 0.31875 0.336363636 0.54375 110 4 2 154 2L:6096981-6097031 6 102.5 397 FBgn0031779 121.6666667 7.2 10.92 0.842465753 14.23611111 9.386446886 -2 -2 -2 0.25 dme-miR-277-3p 6mer3-8 TGCATT 2L 6097131 6097136 - 2L_6097131_6097136_- 0.788360808 0.900192682 0.844276745 0.079077095 CG9175 FBtr0079212|FBtr0079211 6096696|6096696 6097167|6097167 2L - 6097110 6097204 stop_codon CG9175 FlyBase G8043.1 CGCCGTGTTCGTGCTGTGCTCCTACATTGGCATCTGATGCTCAATGGCCAGAAGAGAGTTATTCGATTTGCATTATTAGTTTGTAAACAGGGTTT 44 6097138 0.809251049 12 43 476 0.980769231 1.707570176 0.173076923 0.181818182 0.307692308 44 1 0 51 2L:6097110-6097204 6 CG9175 FBtr0079212|FBtr0079211 6096696|6096696 6097167|6097167 TGCATT 6mer3-8 dme-miR-277-3p 2L - 6097097 6097186 stop_codon CG9175 FlyBase G6256.1 CTCCTACATTGGCATCTGATGCTCAATGGCCAGAAGAGAGTTATTCGATTTGCATTATTAGTTTGTAAACAGGGTTTAGTTTTCTGCAAT 26 6097138 0.793856487 9 24 286 0.945945946 1.243038049 0.108108108 0.346153846 0.540540541 26 1 1 35 2L:6097097-6097186 6 27.5 398 FBgn0031779 121.6666667 7.2 10.92 0.226027397 3.819444444 2.518315018 2 2 2 0.25 dme-miR-1008-3p 7mer-m8 AGCTGTG 2L 6123088 6123094 + 2L_6123088_6123094_+ 0.574289813 0.667732426 0.62101112 0.066073896 stai FBtr0333406|FBtr0079196|FBtr0079197|FBtr0304908|FBtr0079198 6123063|6123063|6123063|6123063|6123063 6123899|6123899|6124653|6124653|6123899 2L + 6123008 6123107 stop_codon stai FlyBase G2299.1 AAGGCCCAGGCCCAGGATTTGGATGGTCAGCAGAGCGCCATTGCCTCCTCAGGCTAAGTGGAGAACGATCCTGCATCGAGAGCTGTGCTCACCCACTGCA 43 6123093 0.955149943 14 39 180 0.884615385 1.662757832 0.173076923 0.186046512 0.326923077 43 6 0 46 2L:6123008-6123107 7 stai FBtr0079196|FBtr0079197|FBtr0304908|FBtr0079198|FBtr0333406 6123063|6123063|6123063|6123063|6123063 6123899|6124653|6124653|6123899|6123899 AGCTGTG 7mer-m8 dme-miR-1008-3p 2L + 6123008 6123108 stop_codon stai FlyBase G1827.1 AAGGCCCAGGCCCAGGATTTGGATGGTCAGCAGAGCGCCATTGCCTCCTCAGGCTAAGTGGAGAACGATCCTGCATCGAGAGCTGTGCTCACCCACTGCAA 30 6123093 0.972900263 15 24 144 0.853658537 1.544068044 0.243902439 0.266666667 0.463414634 30 6 0 35 2L:6123008-6123108 7 23 399 FBgn0266521 1156.12 73.38 111.3866667 0.019894129 0.313436904 0.20648791 -5 -5 -5 0.25 dme-miR-33-5p 6mer2-7 AATGCA 2L 6123429 6123434 + 2L_6123429_6123434_+ 0.993036269 0.992514162 0.992775216 0.00036918 stai FBtr0333406|FBtr0079196|FBtr0079197|FBtr0304908|FBtr0079198 6123063|6123063|6123063|6123063|6123063 6123899|6123899|6124653|6124653|6123899 2L + 6123414 6123445 3'utr stai FlyBase G2301.1 AGCCTATGCAAGTTGAATGCATGCCTGTCATT 7 6123431 0.706712033 4 6 45 0.9 0.653212514 0 0.285714286 0.5 7 0 1 9 2L:6123414-6123445 6 stai FBtr0079196|FBtr0079197|FBtr0304908|FBtr0079198|FBtr0333406 6123063|6123063|6123063|6123063|6123063 6123899|6124653|6124653|6123899|6123899 AATGCA 6mer2-7 dme-miR-33-5p 2L + 6123412 6123442 3'utr stai FlyBase G1829.1 AAAGCCTATGCAAGTTGAATGCATGCCTGTC 7 6123426 0.710015409 3 5 32 0.833333333 1 0.25 0.571428571 0.75 7 2 0 10 2L:6123412-6123442 6 6 400 FBgn0266521 1156.12 73.38 111.3866667 0.005189773 0.081766149 0.053866411 -2 3 0.5 0.25 dme-miR-307a-3p 7mer-m8 GGTTGTG 2L 6331071 6331077 + 2L_6331071_6331077_+ 0.437782725 0.702957657 0.570370191 0.187507041 PDZ-GEF FBtr0333242 6330837 6332789 2L + 6331044 6331158 3'utr PDZ-GEF FlyBase G2335.1 CAGATAGAGTTGCCAAAATTTGTGAATGGTTGTGGTTTCAATTTCGCCAGCAATCAGAAACAACGTATCCCCGATCACCTTTACCCTTTACGGAGCTGCAAAAATATTACTAGCA 67 6331063 0.956289151 15 66 529 0.986842105 1.875061263 0.276315789 0.134328358 0.236842105 67 1 0 75 2L:6331044-6331158 7 PDZ-GEF FBtr0300038|FBtr0079249|FBtr0300039|FBtr0333242 6330837|6330642|6330837|6330837 6331750|6331750|6331750|6332789 GGTTGTG 7mer-m8 dme-miR-307a-3p 2L + 6331045 6331082 3'utr PDZ-GEF FlyBase G1853.1 AGATAGAGTTGCCAAAATTTGTGAATGGTTGTGGTTTC 16 6331070 0.659142935 5 14 141 0.894736842 0.929418926 0.368421053 0.1875 0.315789474 16 1 1 17 2L:6331045-6331082 7 23 401 FBgn0265778 1055.34 20.3 30.87333333 0.021793924 1.133004926 0.744979486 8 1 4.5 0.25 dme-miR-2b-2-5p 7mer-m8 TTGAAGA 2L 6331355 6331361 + 2L_6331355_6331361_+ 0.53199294 0.544370647 0.538181793 0.008752356 PDZ-GEF FBtr0333242|FBtr0300039|FBtr0079249|FBtr0300038 6330837|6330837|6330642|6330837 6332789|6331750|6331750|6331750 2L + 6331184 6331398 3'utr PDZ-GEF FlyBase G2336.1 TAGTAACTGAGAATTTAATTTTAGTTAGGGCTTACCATTTATTATTTAATTTAGCTAAATTCTTTGTACACACTTTCTACCCATCATTCACCGCCAGCGTAGAAGTTGCCTTTTCTCTTAAAAGAAAACGTCTGCAGGCAGACCCTCTCAGCAGACCCAACTAAAACTCTTTTGAAGACTTTTCGTCGGCATTTACAAGTGTAAGAACAGAACAA 43 6331365 0.98260541 21 42 319 0.963636364 1.72427587 0.2 0.23255814 0.4 43 2 0 53 2L:6331184-6331398 7 PDZ-GEF FBtr0300038|FBtr0079249|FBtr0300039|FBtr0333242 6330837|6330642|6330837|6330837 6331750|6331750|6331750|6332789 TTGAAGA 7mer-m8 dme-miR-2b-2-5p 2L + 6331310 6331377 3'utr PDZ-GEF FlyBase G1856.1 AACGTCTGCAGGCAGACCCTCTCAGCAGACCCAACTAAAACTCTTTTGAAGACTTTTCGTCGGCATTT 10 6331330 0.840109877 7 9 59 0.888888889 1.204119983 0 0.6 0.777777778 10 2 0 16 2L:6331310-6331377 7 12.5 402 FBgn0265778 1055.34 20.3 30.87333333 0.011844524 0.615763547 0.404880155 -10 25 7.5 0.25 dme-miR-252-5p 6mer3-8 GTACTT 2L 6332132 6332137 + 2L_6332132_6332137_+ 0.629918767 0.958489834 0.7942043 0.232334782 PDZ-GEF FBtr0333242 6330837 6332789 2L + 6332079 6332185 3'utr PDZ-GEF FlyBase G2343.1 AAATCAAATCAAACGATATTGGATATGCTATATATGTATACATTGTGCTCTTTGTACTTTTAAGTTAGACTAAATACCAAATTTGCTTTTTAAGGCTTAAGAAAAAC 82 6332161 0.991359336 19 77 828 0.949494949 1.672097858 0.262626263 0.170731707 0.313131313 82 4 1 94 2L:6332079-6332185 6 PDZ-GEF FBtr0333242 6330837 6332789 GTACTT 6mer3-8 dme-miR-252-5p 2L + 6332056 6332201 3'utr PDZ-GEF FlyBase G1861.1 GCTGAATTCGAGAAAACAAAAACAAATCAAATCAAACGATATTGGATATGCTATATATGTATACATTGTGCTCTTTGTACTTTTAAGTTAGACTAAATACCAAATTTGCTTTTTAAGGCTTAAGAAAAACATTAGATCGAAGCCTA 58 6332121 0.990771662 22 55 562 0.975609756 1.903089987 0.158536585 0.310344828 0.512195122 58 2 0 80 2L:6332056-6332201 6 38 403 FBgn0265778 1055.34 20.3 30.87333333 0.036007353 1.871921182 1.230835673 -29 11 -9 0.25 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 6333148 6333154 - 2L_6333148_6333154_- 0.556279571 0.549209156 0.552744364 0.004999528 Pez FBtr0331226|FBtr0079284 6332879|6332879 6333292|6333292 2L - 6333124 6333235 3'utr Pez FlyBase G8066.1 TTGTTTATATCGAACAAATTTCCTTTAGTTCTCGTTTTAAAAAATCAGTACAACTCCGTTCAGCAATTTTATATTTCTACTGGCAGCTGTTGTCCCTATAATCGTTAAATTT 483 6333155 0.990083965 23 458 4598 0.953982301 2.129528774 0.02300885 0.144927536 0.269026549 483 23 3 539 2L:6333124-6333235 7 Pez FBtr0331226|FBtr0079284 6332879|6332879 6333292|6333292 GGCAGCT 7mer-m8 dme-miR-980-3p 2L - 6333118 6333197 3'utr Pez FlyBase G6276.1 AAAAAATCAGTACAACTCCGTTCAGCAATTTTATATTTCTACTGGCAGCTGTTGTCCCTATAATCGTTAAATTTTAATAC 281 6333155 0.902582566 17 264 2648 0.93627451 2.104942108 0.046568627 0.341637011 0.546568627 281 24 2 382 2L:6333118-6333197 7 367 404 FBgn0031799 375.3333333 10.13666667 15.53333333 0.977797513 36.20519566 23.62660944 1 1 1 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 2L 6415192 6415199 + 2L_6415192_6415199_+ 0.615671344 0.613962066 0.614816705 0.001208587 CG13982 FBtr0079256 6414070 6415335 2L + 6415167 6415298 3'utr CG13982 FlyBase G2382.1 TTGTAAATTTTTAAGTTTAACTGATACCAAAGATTTATTTTGAAACTTGAATGTTACTCTCCATAGACTACATACTAGTATTTAAGTACGTTCACTATTTTCGCTGCACAGTAAATGTCATTTATTTGTGTC 115 6415191 0.903363832 21 113 864 0.984732824 2.11058971 0.022900763 0.113043478 0.221374046 115 2 0 129 2L:6415167-6415298 8 CG13982 FBtr0079256 6414070 6415335 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2L + 6415168 6415253 3'utr CG13982 FlyBase G1887.1 TGTAAATTTTTAAGTTTAACTGATACCAAAGATTTATTTTGAAACTTGAATGTTACTCTCCATAGACTACATACTAGTATTTAAGT 72 6415191 0.904059583 10 71 546 0.990291262 1.707570176 0 0.305555556 0.514563107 72 0 1 102 2L:6415168-6415253 8 80 405 FBgn0031811 23.7 1.106666667 1.73 3.375527426 72.28915663 46.24277457 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-m8 CTGTGAT 2L 6426260 6426266 + 2L_6426260_6426266_+ 0.66142976 0.66137081 0.661400285 4.17E-05 Fic FBtr0079257|FBtr0079257|FBtr0079257 6426121|6426121|6426121 6426371|6426371|6426371 2L + 6426243 6426308 3'utr Fic FlyBase G2392.1 AAAATAACGATGTAATTCTGTGATCATATTTAAGCTAAAAGACAACCAAAAAATGTACATAATGCA 237 6426259 0.854317163 13 218 1974 0.93220339 1.962211439 0.06440678 0.219409283 0.372881356 237 18 2 275 2L:6426243-6426308 7 Fic FBtr0079257|FBtr0079257|FBtr0079257 6426121|6426121|6426121 6426371|6426371|6426371 CTGTGAT 7mer-m8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 6426241 6426318 3'utr Fic FlyBase G1893.1 GAAAAATAACGATGTAATTCTGTGATCATATTTAAGCTAAAAGACAACCAAAAAATGTACATAATGCACAATCCAACT 151 6426258 0.933418858 14 139 1229 0.922018349 1.604226053 0.050458716 0.298013245 0.513761468 151 13 4 201 2L:6426241-6426318 7 174.5 406 FBgn0263278 143.1166667 8.97 13.60333333 1.219284966 19.45373467 12.8277383 1 2 1.5 0.25 dme-miR-283-5p 8mer-A1 TGATATTA 2L 6448480 6448487 - 2L_6448480_6448487_- 0.541667641 0.483124743 0.512396192 0.041396082 retm FBtr0339788 6448462 6449851 2L - 6448467 6448513 3'utr retm FlyBase G8125.1 AAACATTTTGTGAAAACATTGAATTGTGATATTAAAGAAAATTAAAC 46 6448490 0.69888334 6 44 372 0.963636364 1.423245874 0.272727273 0.152173913 0.290909091 46 1 1 53 2L:6448467-6448513 8 retm FBtr0339788 6448462 6449851 TGATATTA 8mer-A1 dme-miR-283-5p 2L - 6448467 6448509 3'utr retm FlyBase G6317.1 ATTTTGTGAAAACATTGAATTGTGATATTAAAGAAAATTAAAC 24 6448491 0.716369219 5 22 187 0.921052632 1.544068044 0.526315789 0.416666667 0.631578947 24 3 0 35 2L:6448467-6448509 8 34 407 FBgn0031814 365.7 13.12 20.05 0.092972382 2.591463415 1.695760599 3 4 3.5 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 2L 6449682 6449687 - 2L_6449682_6449687_- 0.999614455 0.994928453 0.997271454 0.003313502 retm FBtr0329951|FBtr0339788|FBtr0079272 6448804|6448462|6448804 6449707|6449851|6449851 2L - 6449615 6449702 3'utr retm FlyBase G8130.1 AAAGTGGTAATATCTTGTGTTTTAGTTGTCTTTAGTTGTTTAGCAGAATGTTAGTTTGATTTTAAATTGTATTTAGCTCAAATAGGCC 62 6449688 0.71880178 19 57 754 0.909090909 1.146128036 0.324675325 0.193548387 0.350649351 62 3 4 70 2L:6449615-6449702 6 retm FBtr0329951|FBtr0339788|FBtr0079272 6448804|6448462|6448804 6449707|6449851|6449851 TGTGTT 6mer3-8 dme-miR-317-3p 2L - 6449640 6449702 3'utr retm FlyBase G6323.1 AAAGTGGTAATATCTTGTGTTTTAGTTGTCTTTAGTTGTTTAGCAGAATGTTAGTTTGATTTT 47 6449688 0.995314682 8 41 596 0.888888889 0.954242509 0.320987654 0.468085106 0.691358025 47 2 7 72 2L:6449640-6449702 6 45.5 408 FBgn0031814 365.7 13.12 20.05 0.124418923 3.467987805 2.269326683 1 1 1 0.25 dme-miR-999-3p 6mer3-8 AGTTAA 2L 6474464 6474469 - 2L_6474464_6474469_- 0.999887444 0.999999981 0.999943713 7.96E-05 CG9536 FBtr0303229|FBtr0079267 6474436|6474436 6474798|6474798 2L - 6474453 6474494 3'utr CG9536 FlyBase G8161.1 TGTAATTGAAAATGATGCTTTATTTAGTTAATAACTGTAAAT 44 6474474 0.688109184 9 39 472 0.901960784 1.361727836 0.137254902 0.159090909 0.274509804 44 4 1 46 2L:6474453-6474494 6 CG9536 FBtr0303229|FBtr0079267 6474436|6474436 6474798|6474798 AGTTAA 6mer3-8 dme-miR-999-3p 2L - 6474455 6474539 3'utr CG9536 FlyBase G6340.1 CTAGAGCCCTTACATAGATGCATACTTTCTGTTGTAGTCCTTACATGTAATTGAAAATGATGCTTTATTTAGTTAATAACTGTAA 45 6474472 0.807463949 17 36 465 0.788732394 0.84509804 0.267605634 0.422222222 0.633802817 45 8 7 56 2L:6474455-6474539 6 33 409 FBgn0031818 366.33 22.85 34.65666667 0.090082712 1.444201313 0.952197749 5 3 4 0.25 dme-miR-965-3p 7mer-m8 TACGCTT 2L 6474632 6474638 - 2L_6474632_6474638_- 0.411624487 0.463638254 0.43763137 0.036779311 CG9536 FBtr0303229|FBtr0079267 6474436|6474436 6474798|6474798 2L - 6474610 6474704 3'utr CG9536 FlyBase G8162.1 CGTACCCCCCATCAGTGTTCCCATTTTGTAATTACCGTTCGTGTGTTTCGTAGTGTCCTGTAGACTTACGCTTGCTTGCTGCGCACACCGCCGGC 44 6474639 0.985849807 16 41 374 0.921568627 1.194976603 0.254901961 0.136363636 0.254901961 44 2 2 47 2L:6474610-6474704 7 CG9536 FBtr0303229|FBtr0079267 6474436|6474436 6474798|6474798 TACGCTT 7mer-m8 dme-miR-965-3p 2L - 6474588 6474655 3'utr CG9536 FlyBase G6341.1 GTAGTGTCCTGTAGACTTACGCTTGCTTGCTGCGCACACCGCCGGCCATGCTGCTAGGAGCGGCGGAG 24 6474639 0.979784162 6 23 186 0.933333333 1.021189299 0.066666667 0.541666667 0.755555556 24 0 3 42 2L:6474588-6474655 7 25.5 410 FBgn0031818 366.33 22.85 34.65666667 0.069609369 1.115973742 0.73578917 1 1 1 0.25 dme-miR-283-5p 8mer-m1 TGATATTT 2L 6474759 6474766 - 2L_6474759_6474766_- 0.30958598 0.34964515 0.329615565 0.028326132 CG9536 FBtr0303229|FBtr0079267 6474436|6474436 6474798|6474798 2L - 6474710 6474774 3'utr CG9536 FlyBase G8163.1 TGAATTTTTGATATTTAAACGAATGATCTAATGATTTACGCCCATGTTTTGTATGATTCTGCATC 47 6474751 0.82828254 11 47 400 1 1.740362689 0.109090909 0.127659574 0.254545455 47 0 0 55 2L:6474710-6474774 8 CG9536 FBtr0303229|FBtr0079267 6474436|6474436 6474798|6474798 TGATATTT 8mer-m1 dme-miR-283-5p 2L - 6474662 6474783 3'utr CG9536 FlyBase G6342.1 ATATATTAATGAATTTTTGATATTTAAACGAATGATCTAATGATTTACGCCCATGTTTTGTATGATTCTGCATCAAGTACGTACCCCCCATCAGTGTTCCCATTTTGTAATTACCGTTCGTG 43 6474751 0.989597655 12 38 352 0.923076923 1.079181246 0.107692308 0.325581395 0.553846154 43 1 4 60 2L:6474662-6474783 8 21 411 FBgn0031818 366.33 22.85 34.65666667 0.057325362 0.919037199 0.605944022 -15 -15 -15 0.25 dme-miR-1007-3p 8mer-A1 TGAGCTTA 2L 6496457 6496464 + 2L_6496457_6496464_+ 0.53152858 0.580802283 0.556165431 0.034841767 CG31638 FBtr0079262|FBtr0113411 6496064|6496119 6496988|6496988 2L + 6496441 6496492 3'utr CG31638 FlyBase G2447.1 GCTGGCCATATTCTTATGAGCTTAACCCGCAGCTAAGACGGTTGTTAGGAGG 15 6496451 0.779152902 4 14 102 0.9375 1.176091259 0.3125 0.066666667 0.125 15 1 0 15 2L:6496441-6496492 8 CG31638 FBtr0113411|FBtr0079262 6496119|6496064 6496988|6496988 TGAGCTTA 8mer-A1 dme-miR-1007-3p 2L + 6496441 6496472 3'utr CG31638 FlyBase G1929.1 GCTGGCCATATTCTTATGAGCTTAACCCGCAG 7 6496451 0.724868643 2 7 46 1 0.954242509 0.555555556 0.285714286 0.444444444 7 0 0 9 2L:6496441-6496472 8 9.5 412 FBgn0051638 490.34 20.43333333 31.29333333 0.019374312 0.464926591 0.303579037 6 6 6 0.25 dme-miR-263a-5p 6mer3-8 GTGCCA 2L 6496629 6496634 + 2L_6496629_6496634_+ 0.96050537 0.992222518 0.976363944 0.022427376 CG31638 FBtr0079262|FBtr0113411 6496064|6496119 6496988|6496988 2L + 6496612 6496639 3'utr CG31638 FlyBase G2449.1 TTGCGGAATAGCATTTAGTGCCAGAAAT 14 6496630 0.907088606 2 14 71 1 1.278753601 0.315789474 0.285714286 0.473684211 14 0 0 19 2L:6496612-6496639 6 CG31638 FBtr0113411|FBtr0079262 6496119|6496064 6496988|6496988 GTGCCA 6mer3-8 dme-miR-263a-5p 2L + 6496586 6496636 3'utr CG31638 FlyBase G1931.1 ATTGAAGCATAATACAGGTTCGATGTTTGCGGAATAGCATTTAGTGCCAGA 6 6496629 0.95297376 4 6 31 1 0.903089987 0.375 0.333333333 0.5 6 0 0 8 2L:6496586-6496636 6 9 413 FBgn0051638 490.34 20.43333333 31.29333333 0.018354611 0.44045677 0.287601193 -1 0 -0.5 0.25 dme-bantam-3p 6mer3-8 TGATCT 2L 6496814 6496819 + 2L_6496814_6496819_+ 0.987955738 0.881907563 0.934931651 0.074987331 CG31638 FBtr0079262|FBtr0113411 6496064|6496119 6496988|6496988 2L + 6496745 6496825 3'utr CG31638 FlyBase G2450.1 ATTTTTGCAGTTGCCTAGTCCGAAATTCTTTTAGTTTTTCAAAAGTCTATCGATATTCAGCGGCATAGTTGATCTTTTACA 30 6496821 0.977348276 9 28 235 0.928571429 1.290034611 0 0.3 0.5 30 2 1 39 2L:6496745-6496825 6 CG31638 FBtr0113411|FBtr0079262 6496119|6496064 6496988|6496988 TGATCT 6mer3-8 dme-bantam-3p 2L + 6496795 6496825 3'utr CG31638 FlyBase G1932.1 CGATATTCAGCGGCATAGTTGATCTTTTACA 21 6496821 0.634827359 4 20 154 0.911764706 1.491361694 0 0.380952381 0.617647059 21 3 0 31 2L:6496795-6496825 6 23 414 FBgn0051638 490.34 20.43333333 31.29333333 0.046906228 1.125611746 0.734980827 -7 -7 -7 0.25 dme-miR-965-3p 7mer-A1 ACGCTTA 2L 6564093 6564099 + 2L_6564093_6564099_+ 0.802152882 0.82334954 0.812751211 0.01498826 Ent2 FBtr0343158|FBtr0079290 6564072|6564072 6564709|6564396 2L + 6564077 6564117 3'utr Ent2 FlyBase G2469.1 TACATTTATTAGTATGACGCTTACTAACAATTTTCATTGTT 9 6564091 0.987977865 4 9 79 1 1 0 0.111111111 0.2 9 0 0 10 2L:6564077-6564117 7 Ent2 FBtr0343158|FBtr0079290 6564072|6564072 6564709|6564396 ACGCTTA 7mer-A1 dme-miR-965-3p 2L + 6564080 6564114 3'utr Ent2 FlyBase G1945.1 ATTTATTAGTATGACGCTTACTAACAATTTTCATT 6 6564091 0.674662479 3 6 54 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 2L:6564080-6564114 7 7 415 FBgn0263916 786.86 45.64666667 69.53333333 0.008896119 0.153351833 0.100671141 2 2 2 0.25 dme-miR-1008-3p 8mer-A1 AGCTGTGA 2L 6564580 6564587 - 2L_6564580_6564587_- 0.476449425 0.564433688 0.520441556 0.062214295 CG13766 FBtr0343161|FBtr0079330 6564110|6564361 6565169|6565169 2L - 6564544 6564608 3'utr CG13766 FlyBase G8188.1 TTATTTCATTCAATCGGATGAAGCTGTGATAAAACGAACCAAATATTCCATTGACTTGTTAGACC 21 6564590 0.77547647 8 19 137 0.916666667 1.041392685 0.083333333 0.095238095 0.208333333 21 1 1 22 2L:6564544-6564608 8 CG13766 FBtr0079330|FBtr0343161 6564361|6564110 6565169|6565169 AGCTGTGA 8mer-A1 dme-miR-1008-3p 2L - 6564540 6564609 3'utr CG13766 FlyBase G6370.1 GTTATTTCATTCAATCGGATGAAGCTGTGATAAAACGAACCAAATATTCCATTGACTTGTTAGACCCCCT 24 6564590 0.862002143 7 17 119 0.625 0.920818754 0.3 0.458333333 0.675 24 13 2 25 2L:6564540-6564609 8 15.5 416 FBgn0031834 61.51666667 4.113333333 6.276666667 0.251964237 3.768233387 2.469463622 3 3 3 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 6633068 6633075 - 2L_6633068_6633075_- 0.44659813 0.379215068 0.412906599 0.047646976 CG31635 FBtr0331191|FBtr0331187 6632796|6632796 6634810|6634810 2L - 6633006 6633125 3'utr CG31635 FlyBase G8197.1 TGTTTCAACGTATCTTCATCAGTTAAGTGGAATTACTTAAAAAATGTACTGTACTTAATTTACAAATAGTTGATATTTCTGGTGCTTACCGGTCGCTAGAAGTTTGCCTTAAACTAGATC 79 6633076 0.790901547 18 76 710 0.966666667 1.939519253 0.088888889 0.139240506 0.244444444 79 3 0 87 2L:6633006-6633125 8 CG31635 FBtr0331187|FBtr0331191 6632796|6632796 6634810|6634810 GTACTTAA 8mer-A1 dme-miR-252-5p 2L - 6632999 6633091 3'utr CG31635 FlyBase G6376.1 ACTTAAAAAATGTACTGTACTTAATTTACAAATAGTTGATATTTCTGGTGCTTACCGGTCGCTAGAAGTTTGCCTTAAACTAGATCCCCGTTT 38 6633076 0.989174555 5 36 344 0.965517241 1.447158031 0.034482759 0.394736842 0.603448276 38 1 1 56 2L:6632999-6633091 8 44 417 FBgn0051635 607.7033333 10.19333333 15.53666667 0.07240375 4.316546763 2.832010298 1 1 1 0.25 dme-bantam-3p 8mer-A1 TGATCTCA 2L 6633661 6633668 - 2L_6633661_6633668_- 0.575840975 0.545183327 0.560512151 0.021678268 CG31635 FBtr0331191|FBtr0331187 6632796|6632796 6634810|6634810 2L - 6633592 6633723 3'utr CG31635 FlyBase G8200.1 TTAACAACGGAAATGAAGCGCAAACGAAAACAAAAGTACCCAAAATAAATCCAATTGATCTCATTATGTGATATTTGTCGTAGTGCCCAAAGCGTTCACTGTACGTGTATCTATAACCAAACCATACCATAT 484 6633669 0.989510946 23 450 4377 0.931389365 2.035829825 0.015437393 0.17768595 0.317324185 484 36 4 543 2L:6633592-6633723 8 CG31635 FBtr0331187|FBtr0331191 6632796|6632796 6634810|6634810 TGATCTCA 8mer-A1 dme-bantam-3p 2L - 6633542 6633721 3'utr CG31635 FlyBase G6379.1 AACAACGGAAATGAAGCGCAAACGAAAACAAAAGTACCCAAAATAAATCCAATTGATCTCATTATGTGATATTTGTCGTAGTGCCCAAAGCGTTCACTGTACGTGTATCTATAACCAAACCATACCATATGAGTTAAGTACAGGGTGTGTACATTCGAACACTTTTGCTCTAAGTAAACT 369 6633669 0.987791287 26 340 3224 0.919847328 1.984077034 0.04389313 0.319783198 0.520992366 369 38 4 482 2L:6633542-6633721 8 394.5 418 FBgn0051635 607.7033333 10.19333333 15.53666667 0.649165437 38.70176586 25.39154688 1 1 1 0.25 dme-miR-252-5p 7mer-m8 GTACTTA 2L 6634160 6634166 - 2L_6634160_6634166_- 0.570712721 0.581978559 0.57634564 0.007966194 CG31635 FBtr0331191|FBtr0331187 6632796|6632796 6634810|6634810 2L - 6634134 6634185 3'utr CG31635 FlyBase G8202.1 TCGTGTGGATGAAAAATTTGTACTTACCGATTCAAATGAATACTTACTGAAA 14 6634167 0.986717499 4 13 106 0.9375 1.176091259 0.6875 0.071428571 0.1875 14 1 0 15 2L:6634134-6634185 7 CG31635 FBtr0331187|FBtr0331191 6632796|6632796 6634810|6634810 GTACTTA 7mer-m8 dme-miR-252-5p 2L - 6634147 6634184 3'utr CG31635 FlyBase G6381.1 CGTGTGGATGAAAAATTTGTACTTACCGATTCAAATGA 11 6634167 0.70245094 3 11 86 1 1.230448921 0.294117647 0.454545455 0.647058824 11 0 0 17 2L:6634147-6634184 7 11.5 419 FBgn0051635 607.7033333 10.19333333 15.53666667 0.018923707 1.128188358 0.74018451 1 1 1 0.25 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 6635598 6635605 - 2L_6635598_6635605_- 0.562621584 0.55254287 0.557582227 0.007126717 CG31635 FBtr0079326|FBtr0331188|FBtr0331189|FBtr0331190 6635543|6635543|6635543|6635543 6635647|6635647|6635647|6635647 2L - 6635560 6635624 5'utr CG31635 FlyBase G8204.1 TATATACAAAGGGGATAATTCTAGTCATAAAGGAACCATAATATTTGAAGAATTCTCTATAAATG 125 6635606 0.700874894 8 121 720 0.950704225 1.653212514 0.232394366 0.112 0.218309859 125 5 2 135 2L:6635560-6635624 8 CG31635 FBtr0331188|FBtr0079326|FBtr0331190|FBtr0331189 6635543|6635543|6635543|6635543 6635647|6635647|6635647|6635647 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 6635564 6635619 5'utr CG31635 FlyBase G6382.1 ACAAAGGGGATAATTCTAGTCATAAAGGAACCATAATATTTGAAGAATTCTCTATA 52 6635606 0.973309407 6 47 288 0.915492958 1.210853365 0.197183099 0.346153846 0.521126761 52 3 3 65 2L:6635564-6635619 8 85.5 420 FBgn0051635 607.7033333 10.19333333 15.53666667 0.14069365 8.387835186 5.50311092 1 1 1 0.25 dme-miR-317-3p 8mer-A1 TGTGTTCA 2L 6661963 6661970 + 2L_6661963_6661970_+ 0.629049131 0.624662538 0.626855834 0.003101795 CG11070 FBtr0079297 6661698 6662033 2L + 6661921 6661994 3'utr CG11070 FlyBase G2512.1 AATAACATGCAAAGGATAAATTATTGTAGTCATATTTGGTTTTGTGTTCACAATATGTTTACATATATGTTTAA 29 6661962 0.992589672 8 28 324 0.970588235 1.217483944 0.058823529 0.137931034 0.264705882 29 0 1 33 2L:6661921-6661994 8 CG11070 FBtr0079297 6661698 6662033 TGTGTTCA 8mer-A1 dme-miR-317-3p 2L + 6661921 6661994 3'utr CG11070 FlyBase G1988.1 AATAACATGCAAAGGATAAATTATTGTAGTCATATTTGGTTTTGTGTTCACAATATGTTTACATATATGTTTAA 21 6661962 0.957462311 4 20 220 0.944444444 1.531478917 0.111111111 0.571428571 0.75 21 2 0 34 2L:6661921-6661994 8 21 421 FBgn0028467 522.98 18.67666667 28.61666667 0.040154499 1.124397644 0.73383809 1 1 1 0.25 dme-miR-79-3p 7mer-m8 TAGCTTT 2L 6678077 6678083 - 2L_6678077_6678083_- 0.613964551 0.439114134 0.526539343 0.123637974 Nhe3 FBtr0300327|FBtr0273247|FBtr0273248|FBtr0333348|FBtr0273250 6677833|6677833|6677833|6677833|6677833 6678146|6679193|6678723|6679064|6678723 2L - 6678064 6678097 3'utr Nhe3 FlyBase G8245.1 ACAACATAAACTTATAGCTTTTTCGTTCTAAGCC 16 6678076 0.625529767 4 15 148 0.954545455 1.322219295 0 0.375 0.545454545 16 1 0 21 2L:6678064-6678097 7 Nhe3 FBtr0273250|FBtr0300327|FBtr0273247|FBtr0273248|FBtr0333348 6677833|6677833|6677833|6677833|6677833 6678723|6678146|6679193|6678723|6679064 TAGCTTT 7mer-m8 dme-miR-79-3p 2L - 6678049 6678095 3'utr Nhe3 FlyBase G6412.1 AACATAAACTTATAGCTTTTTCGTTCTAAGCCAGTTAGTGTAAATAT 12 6678076 0.963675839 3 11 113 0.842105263 1.204119983 0 0.416666667 0.631578947 12 3 0 16 2L:6678049-6678095 7 13 422 FBgn0028703 495.63 20.01 30.39666667 0.026229244 0.649675162 0.427678474 -7 -7 -7 0.25 dme-miR-932-5p 6mer2-7 GAATTG 2L 6678682 6678687 - 2L_6678682_6678687_- 0.522609101 0.650638019 0.58662356 0.090530103 Nhe3 FBtr0273247|FBtr0273248|FBtr0273250 6677833|6677833|6677833 6679193|6678723|6678723 2L - 6678624 6678702 3'utr Nhe3 FlyBase G8247.2 CTTTTGTTATTTATTGAATTGGTCTCAACTGAAATCGAAAATGTGAAAACTGTACAAATTAGAATATTACTTTTCAGTT 259 6678684 0.724330692 19 240 2028 0.93015873 1.68871637 0.174603175 0.181467181 0.326984127 259 17 5 293 2L:6678624-6678702 6 Nhe3 FBtr0273250|FBtr0273247|FBtr0273248 6677833|6677833|6677833 6678723|6679193|6678723 GAATTG 6mer2-7 dme-miR-932-5p 2L - 6678630 6678709 3'utr Nhe3 FlyBase G6416.1 TAGTTTTCTTTTGTTATTTATTGAATTGGTCTCAACTGAAATCGAAAATGTGAAAACTGTACAAATTAGAATATTACTTT 182 6678684 0.722392589 16 177 1385 0.97080292 2.123851641 0.142335766 0.357142857 0.572992701 182 7 1 266 2L:6678630-6678709 6 159 423 FBgn0028703 495.63 20.01 30.39666667 0.320803825 7.946026987 5.230836715 -3 -3 -3 0.25 dme-miR-8-3p 6mer3-8 CAGTAT 2L 6679652 6679657 - 2L_6679652_6679657_- 0.990162322 0.980157982 0.985160152 0.007074108 Nhe3 FBtr0333347 6679319 6679922 2L - 6679631 6679707 3'utr Nhe3 FlyBase G8249.1 AATGTTAAATTTTGTGGTATAAGCGGAAGTGATGGATAAGTTACACCCTTCAGTATGGTTGACTAATTGTTTAAGTT 21 6679658 0.793852309 9 18 171 0.869565217 1.301029996 0.173913043 0.095238095 0.173913043 21 3 0 20 2L:6679631-6679707 6 Nhe3 FBtr0333347 6679319 6679922 CAGTAT 6mer3-8 dme-miR-8-3p 2L - 6679637 6679671 3'utr Nhe3 FlyBase G6418.1 TAAGTTACACCCTTCAGTATGGTTGACTAATTGTT 22 6679659 0.795544405 5 21 166 0.967741935 1.477121255 0.258064516 0.318181818 0.516129032 22 1 0 30 2L:6679637-6679671 6 17.5 424 FBgn0028703 495.63 20.01 30.39666667 0.035308597 0.874562719 0.575721022 1 2 1.5 0.25 dme-miR-318-3p 6mer3-8 CCCAGT 2L 6720349 6720354 - 2L_6720349_6720354_- 0.960599292 0.934548813 0.947574053 0.018420485 homer FBtr0329892|FBtr0333346|FBtr0079307 6719392|6719894|6719894 6721023|6721023|6721023 2L - 6720304 6720370 3'utr homer FlyBase G8262.1 TGAATGTATACCTATGCCCAGTATTTCGTCAAAATTCTTCGAGTCCTTGTGACACTGATGTAGGTCC 15 6720356 0.984437746 7 15 121 1 1.278753601 0 0.2 0.368421053 15 0 0 19 2L:6720304-6720370 6 homer FBtr0079307|FBtr0333346|FBtr0329892 6719894|6719894|6719392 6721023|6721023|6721023 CCCAGT 6mer3-8 dme-miR-318-3p 2L - 6720306 6720372 3'utr homer FlyBase G6429.1 ATTGAATGTATACCTATGCCCAGTATTTCGTCAAAATTCTTCGAGTCCTTGTGACACTGATGTAGGT 11 6720357 0.985145773 7 11 95 1 1.322219295 0 0.545454545 0.761904762 11 0 0 21 2L:6720306-6720372 6 10 425 FBgn0025777 829.61 37.73333333 57.58 0.012053857 0.265017668 0.173671414 2 3 2.5 0.25 dme-bantam-3p 6mer3-8 TGATCT 2L 6778791 6778796 - 2L_6778791_6778796_- 0.878400652 0.922117958 0.900259305 0.030912799 nrv1 FBtr0079384 6778553 6779372 2L - 6778772 6778815 3'utr nrv1 FlyBase G8266.1 CATGGAGAACGAAACATTTTGATCTAAGCTGAATGTCGATTATT 41 6778797 0.656066173 7 38 280 0.936170213 1.643452676 0.234042553 0.12195122 0.234042553 41 3 0 44 2L:6778772-6778815 6 nrv1 FBtr0079384 6778553 6779372 TGATCT 6mer3-8 dme-bantam-3p 2L - 6778772 6778814 3'utr nrv1 FlyBase G6432.1 ATGGAGAACGAAACATTTTGATCTAAGCTGAATGTCGATTATT 32 6778797 0.633711496 8 30 216 0.923076923 1.681241237 0.307692308 0.53125 0.711538462 32 4 0 48 2L:6778772-6778814 6 36 426 FBgn0015776 3384.113333 195.7933333 300.12 0.010637942 0.183867343 0.119952019 1 1 1 0.25 dme-miR-305-5p 7mer-A1 GTACAAA 2L 6778857 6778863 - 2L_6778857_6778863_- 0.770417268 0.773123318 0.771770293 0.001913431 nrv1 FBtr0332370|FBtr0079384 6778822|6778553 6779372|6779372 2L - 6778837 6778966 3'utr nrv1 FlyBase G8267.1 GATCATTATTTTCTGTCAGTTGTATTTAGTTTTAATTTATAAATGTTGAAACATGCCCGAAAAATTCTTTGTTTCCCGCACATCGCCTAGGCTTGTTCAATTTGTACAAAGAAGCAACTAAATAAATTAT 76 6778865 0.994659181 15 75 482 0.989583333 1.977723605 0.354166667 0.210526316 0.375 76 1 0 95 2L:6778837-6778966 7 nrv1 FBtr0332370|FBtr0079384 6778822|6778553 6779372|6779372 GTACAAA 7mer-A1 dme-miR-305-5p 2L - 6778844 6778927 3'utr nrv1 FlyBase G6433.1 TAAATGTTGAAACATGCCCGAAAAATTCTTTGTTTCCCGCACATCGCCTAGGCTTGTTCAATTTGTACAAAGAAGCAACTAAAT 59 6778865 0.987244447 7 58 353 0.9875 1.897627091 0.1875 0.271186441 0.4625 59 1 0 79 2L:6778844-6778927 7 34.5 427 FBgn0015776 3384.113333 195.7933333 300.12 0.010194694 0.176206204 0.114954018 2 2 2 0.25 dme-miR-305-5p 8mer-A1 AGTACAAA 2L 6906875 6906882 - 2L_6906875_6906882_- 0.528503048 0.575753414 0.552128231 0.033411078 CG13773 FBtr0079372 6906664 6906917 2L - 6906862 6906910 3'utr CG13773 FlyBase G8287.1 ACCTTTCGTTTTTAACATCTCTGTATATAGTACAAATTAACAATTACAT 46 6906885 0.781638653 6 45 438 0.980392157 1.397940009 0.098039216 0.086956522 0.176470588 46 0 1 50 2L:6906862-6906910 8 CG13773 FBtr0079372 6906664 6906917 AGTACAAA 8mer-A1 dme-miR-305-5p 2L - 6906870 6906908 3'utr CG13773 FlyBase G6451.1 CTTTCGTTTTTAACATCTCTGTATATAGTACAAATTAAC 14 6906885 0.726582326 5 12 129 0.909090909 1 0 0.428571429 0.636363636 14 1 1 20 2L:6906870-6906908 8 30 428 FBgn0042092 166.9866667 19.41666667 29.97666667 0.179655062 1.545064378 1.000778383 3 3 3 0.25 dme-miR-8-3p 6mer2-7 AGTATT 2L 6911429 6911434 - 2L_6911429_6911434_- 0.999987247 0.999933257 0.999960252 3.81E-05 Wee1 FBtr0332329|FBtr0079371 6911088|6911341 6911700|6911700 2L - 6911390 6911465 3'utr Wee1 FlyBase G8291.1 TAAACTTTAAGATTCTCGCATAGTTGTAATGAGTATTGTTTTCGAAATTAAAATATTTATTATGTTACATGGAAAT 11 6911432 0.986513279 8 11 96 1 1.176091259 0.133333333 0.272727273 0.466666667 11 0 0 15 2L:6911390-6911465 6 Wee1 FBtr0332329|FBtr0079371 6911088|6911341 6911700|6911700 AGTATT 6mer2-7 dme-miR-8-3p 2L - 6911413 6911448 3'utr Wee1 FlyBase G6455.1 GCATAGTTGTAATGAGTATTGTTTTCGAAATTAAAA 7 6911429 0.951315344 4 6 62 1 1 0.2 0.428571429 0.6 7 0 0 10 2L:6911413-6911448 6 6 429 FBgn0011737 492.04 24.44666667 37.58666667 0.012194131 0.245432233 0.159631075 -2 -5 -3.5 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 2L 6911628 6911633 - 2L_6911628_6911633_- 0.794250455 0.811433679 0.802842067 0.012150357 Wee1 FBtr0332329|FBtr0079371 6911088|6911341 6911700|6911700 2L - 6911609 6911700 3'utr Wee1 FlyBase G8293.1 TAAGCTCGCAACAGATGCCGAACCGATAGCTAAACTCTTCCGAATCGAACGTGAACTAAGCTCACATTGTGTTACCTTTTAAGCGTATTCAT 95 6911633 0.98104352 11 93 633 0.98245614 2.049218023 0.140350877 0.178947368 0.315789474 95 2 0 112 2L:6911609-6911700 6 Wee1 FBtr0332329|FBtr0079371 6911088|6911341 6911700|6911700 TGTGTT 6mer3-8 dme-miR-317-3p 2L - 6911608 6911708 stop_codon Wee1 FlyBase G6456.1 ATATCTGATAAGCTCGCAACAGATGCCGAACCGATAGCTAAACTCTTCCGAATCGAACGTGAACTAAGCTCACATTGTGTTACCTTTTAAGCGTATTCATA 53 6911634 0.962293907 9 52 361 0.977272727 1.934498451 0.284090909 0.433962264 0.659090909 53 2 0 86 2L:6911608-6911708 6 43.5 430 FBgn0011737 492.04 24.44666667 37.58666667 0.088407447 1.779383692 1.157325293 0 1 0.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 6914654 6914661 - 2L_6914654_6914661_- 0.631044131 0.630460209 0.63075217 0.00041288 x16 FBtr0079368|FBtr0332328 6914379|6914299 6915042|6915042 2L - 6914548 6914677 3'utr x16 FlyBase G8311.1 AGCCGCAGATTAACGATCTAGTCAGGATTGCTATGTAAATTGATTTGCCTTGGATTTTATTTTGCTTACCCTGGAATTATACTCGAATGTGCAGAGGACGAAGCATCGCCACCATTTTCATGTCAATTTT 31 6914661 0.934813068 10 29 222 0.941176471 1.204119983 0.205882353 0.096774194 0.176470588 31 1 1 32 2L:6914548-6914677 8 x16 FBtr0079368|FBtr0332328 6914379|6914299 6915042|6915042 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 6914622 6914703 3'utr x16 FlyBase G6467.1 AATTTAAGATATAGAAATGTATCGGCAGCCGCAGATTAACGATCTAGTCAGGATTGCTATGTAAATTGATTTGCCTTGGATT 28 6914667 0.972373818 9 27 162 0.977272727 1.633468456 0.318181818 0.464285714 0.659090909 28 1 0 43 2L:6914622-6914703 8 21 431 FBgn0028554 1073.163333 75.76666667 116.1166667 0.019568317 0.27716674 0.180852591 0 6 3 0.25 dme-miR-277-3p 6mer3-8 TGCATT 2L 6943939 6943944 - 2L_6943939_6943944_- 0.991294664 0.99878917 0.995041917 0.005299412 Fgop2 FBtr0079366|FBtr0332325 6943738|6943176 6944048|6944048 2L - 6943899 6943968 3'utr Fgop2 FlyBase G8332.1 CGCACGAAGAGGGCCCACATAACCTGCATTAGCTCTTAGCGATTGATAATCTCTAAGTAATTTATACATA 19 6943949 0.961067937 6 18 96 0.92 1.361727836 0.28 0.263157895 0.44 19 2 0 23 2L:6943899-6943968 6 Fgop2 FBtr0332325|FBtr0079366 6943176|6943738 6944048|6944048 TGCATT 6mer3-8 dme-miR-277-3p 2L - 6943911 6943963 3'utr Fgop2 FlyBase G6485.1 GAAGAGGGCCCACATAACCTGCATTAGCTCTTAGCGATTGATAATCTCTAAGT 13 6943940 0.974597509 3 12 79 0.882352941 1.176091259 0.176470588 0.230769231 0.411764706 13 2 0 15 2L:6943911-6943963 6 14.5 432 FBgn0031871 525 42.17 64.62333333 0.027619048 0.343846336 0.22437716 5 -4 0.5 0.25 dme-miR-276a-3p 6mer2-7 GTTCCT 2L 6954423 6954428 - 2L_6954423_6954428_- 0.431390739 0.527422275 0.479406507 0.067904596 CG13775 FBtr0343775 6954355 6954584 2L - 6954402 6954442 3'utr CG13775 FlyBase G8347.1 ATCAGGATCATTGTGTTCCTCTTCGTCTTCCTCCTCCTCCT 10 6954432 0.79288534 2 10 100 1 1.113943352 0 0.2 0.384615385 10 0 0 13 2L:6954402-6954442 6 CG13775 FBtr0343775 6954355 6954584 GTTCCT 6mer2-7 dme-miR-276a-3p 2L - 6954402 6954442 3'utr CG13775 FlyBase G6497.1 ATCAGGATCATTGTGTTCCTCTTCGTCTTCCTCCTCCTCCT 9 6954432 0.799558189 3 9 101 1 1.079181246 0 0.333333333 0.5 9 0 0 12 2L:6954402-6954442 6 9.5 433 FBgn0031874 57.8 3.896666667 5.98 0.164359862 2.43798118 1.588628763 4 4 4 0.25 dme-miR-305-5p 7mer-m8 AGTACAA 2L 6966868 6966874 - 2L_6966868_6966874_- 0.64075396 0.639533031 0.640143495 0.000863377 smt3 FBtr0079356|FBtr0346716 6966778|6966778 6967027|6967027 2L - 6966844 6966944 3'utr smt3 FlyBase G8372.2 CAAAAACACAACAACAACAACATGAAGAATCCAACAAACCAGGCCCTAAGAATCGATTGAATATGCTTTTAGTACAACTGTAGATTCTAAATGCGTCTGTG 79 6966876 0.987768481 17 75 701 0.955555556 1.633468456 0.177777778 0.139240506 0.244444444 79 3 1 86 2L:6966844-6966944 7 smt3 FBtr0079356|FBtr0346716 6966778|6966778 6967027|6967027 AGTACAA 7mer-m8 dme-miR-305-5p 2L - 6966850 6966944 3'utr smt3 FlyBase G6514.2 CAAAAACACAACAACAACAACATGAAGAATCCAACAAACCAGGCCCTAAGAATCGATTGAATATGCTTTTAGTACAACTGTAGATTCTAAATGCG 50 6966876 0.984249376 13 47 386 0.948051948 1.86332286 0.337662338 0.34 0.571428571 50 4 0 73 2L:6966850-6966944 7 55 434 FBgn0264922 12150.86667 2306.473333 3557.52 0.004526426 0.023845929 0.015460208 2 2 2 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 2L 7030904 7030909 - 2L_7030904_7030909_- 0.879806698 0.890090824 0.884948761 0.007271957 Rab30 FBtr0079428|FBtr0079426|FBtr0079427 7030491|7030491|7030491 7031433|7031433|7031433 2L - 7030883 7030956 3'utr Rab30 FlyBase G8407.1 AGATCCTATGGGAAACTAGCTGTCAATGACTAAGGATGCTAAATATTTGTGTTACAAGAACTCCATTGGAGGTG 90 7030911 0.821874347 9 83 693 0.935185185 1.703291378 0.333333333 0.177777778 0.314814815 90 6 1 101 2L:7030883-7030956 6 Rab30 FBtr0079427|FBtr0079426|FBtr0079428 7030491|7030491|7030491 7031433|7031433|7031433 TGTGTT 6mer3-8 dme-miR-317-3p 2L - 7030823 7030956 3'utr Rab30 FlyBase G6535.2 AGATCCTATGGGAAACTAGCTGTCAATGACTAAGGATGCTAAATATTTGTGTTACAAGAACTCCATTGGAGGTGTTTAAGACCGCCTGATTTTCTTGATTTGTATTATATAGACGTATGTATTGATCTGATTAT 83 7030911 0.946101567 15 79 662 0.959677419 2.075546961 0.403225806 0.313253012 0.540322581 83 5 0 119 2L:7030823-7030956 6 67 435 FBgn0031882 194.3333333 12.53666667 18.90666667 0.344768439 5.344323318 3.543723554 2 2 2 0.25 dme-miR-980-3p 7mer-A1 GCAGCTA 2L 7031105 7031111 - 2L_7031105_7031111_- 0.804116771 0.815640672 0.809878722 0.008148628 Rab30 FBtr0079428|FBtr0079426|FBtr0079427 7030491|7030491|7030491 7031433|7031433|7031433 2L - 7031079 7031152 3'utr Rab30 FlyBase G8408.2 AAACATTTAAAGTACAATGTGCAAACGGATCTGGAAACTGTGCAGCTAATCTGTTATCTGTTATCGTGATATTC 73 7031114 0.86851819 15 57 442 0.846153846 1.40936947 0.230769231 0.164383562 0.32967033 73 12 2 77 2L:7031079-7031152 7 Rab30 FBtr0079427|FBtr0079426|FBtr0079428 7030491|7030491|7030491 7031433|7031433|7031433 GCAGCTA 7mer-A1 dme-miR-980-3p 2L - 7031083 7031201 3'utr Rab30 FlyBase G6536.2 AAGGTATTTAGAGCAATTCTCTTCGCTTTCACTAAACTACGATAACAACAAACATTTAAAGTACAATGTGCAAACGGATCTGGAAACTGTGCAGCTAATCTGTTATCTGTTATCGTGAT 68 7031114 0.85457327 18 59 422 0.909090909 1.653212514 0.151515152 0.323529412 0.535353535 68 8 1 90 2L:7031083-7031201 7 40.5 436 FBgn0031882 194.3333333 12.53666667 18.90666667 0.208404803 3.230523797 2.142101551 3 3 3 0.25 dme-miR-283-5p 7mer-m8 TGATATT 2L 7031367 7031373 - 2L_7031367_7031373_- 0.618145122 0.612916511 0.615530816 0.003697179 Rab30 FBtr0079428|FBtr0079426|FBtr0079427 7030491|7030491|7030491 7031433|7031433|7031433 2L - 7031326 7031486 stop_codon Rab30 FlyBase G8410.1 ATTGCTGTGGCGGACTCGCCAGCGGCGGCTCCAACTCTAGTCAAGGCGGCTGAGCAGCTGCAAACTGAACTGGAAGCTGAGCAGCTAATCTGTAACTTGTTAAGGACTAATCGTGATATTCCATTTATCTTTTATTACCACAATGCTCCCACATTCTAACA 131 7031377 0.96686346 20 125 697 0.951219512 1.716003344 0.158536585 0.183206107 0.347560976 131 6 2 156 2L:7031326-7031486 7 Rab30 FBtr0079427|FBtr0079426|FBtr0079428 7030491|7030491|7030491 7031433|7031433|7031433 TGATATT 7mer-m8 dme-miR-283-5p 2L - 7031349 7031507 stop_codon Rab30 FlyBase G6538.1 GTGCCAAGGCAGCGCAGAGCAATTGCTGTGGCGGACTCGCCAGCGGCGGCTCCAACTCTAGTCAAGGCGGCTGAGCAGCTGCAAACTGAACTGGAAGCTGAGCAGCTAATCTGTAACTTGTTAAGGACTAATCGTGATATTCCATTTATCTTTTATTAC 119 7031377 0.971845675 18 109 631 0.891752577 1.459894853 0.12371134 0.428571429 0.649484536 119 16 5 173 2L:7031349-7031507 7 58.5 437 FBgn0031882 194.3333333 12.53666667 18.90666667 0.30102916 4.666312151 3.094146685 4 4 4 0.25 dme-bantam-3p 6mer3-8 TGATCT 2L 7034833 7034838 + 2L_7034833_7034838_+ 0.997988073 0.971844369 0.984916221 0.018486388 Caper FBtr0344708|FBtr0344712|FBtr0344709|FBtr0344711 7034209|7034497|7034209|7034497 7037613|7037613|7037613|7037878 2L + 7034813 7034842 5'utr Caper FlyBase G2689.1 GCTAAACATTCCCCCAAAACTGATCTGATT 6 7034833 0.755958728 3 6 27 1 0.903089987 0.25 0.333333333 0.5 6 0 0 8 2L:7034813-7034842 6 Caper FBtr0344711|FBtr0344709|FBtr0344712|FBtr0344708 7034497|7034209|7034497|7034209 7037878|7037613|7037613|7037613 TGATCT 6mer3-8 dme-bantam-3p 2L + 7034810 7034849 5'utr Caper FlyBase G2118.1 AGCGCTAAACATTCCCCCAAAACTGATCTGATTGAGAATG 8 7034841 0.889066532 3 8 39 1 1.041392685 0.727272727 0.375 0.545454545 8 0 0 11 2L:7034810-7034849 6 6.5 438 FBgn0031883 799.28 33.26666667 50.99666667 0.008132319 0.195390782 0.127459311 0 -8 -4 0.25 dme-miR-11-3p 7mer-m1 TGTGATG 2L 7054713 7054719 + 2L_7054713_7054719_+ 0.607958896 0.610055331 0.609007114 0.001482379 milt FBtr0306230|FBtr0306228|FBtr0306231|FBtr0306232|FBtr0306233|FBtr0306229 7054555|7054555|7054555|7054555|7054555|7054555 7054847|7054847|7056010|7054847|7056010|7056010 2L + 7054673 7054729 5'utr milt FlyBase G2717.1 TACGCGAGAACAAGTTGAATAACGAAACGTAATGTAATCGTGTGATGAACGTTTAGT 14 7054688 0.968250832 9 13 69 0.933333333 1.146128036 0.2 0.071428571 0.133333333 14 1 0 14 2L:7054673-7054729 7 milt FBtr0306233|FBtr0306229|FBtr0306230|FBtr0306228|FBtr0306231|FBtr0306232 7054555|7054555|7054555|7054555|7054555|7054555 7056010|7056010|7054847|7054847|7056010|7054847 TGTGATG 7mer-m1 dme-miR-11-3p 2L + 7054668 7054738 5'utr milt FlyBase G2144.1 AGCACTACGCGAGAACAAGTTGAATAACGAAACGTAATGTAATCGTGTGATGAACGTTTAGTTTAATTTTT 14 7054688 0.967299234 9 14 77 1 1.431363764 0.333333333 0.5 0.740740741 14 0 0 27 2L:7054668-7054738 7 8.5 439 FBgn0262872 1801.88 44.2 67.81666667 0.004717295 0.192307692 0.125337921 25 25 25 0.25 dme-miR-1008-3p 8mer-A1 AGCTGTGA 2L 7054811 7054818 + 2L_7054811_7054818_+ 0.440107449 0.471472585 0.455790017 0.022178546 milt FBtr0306230|FBtr0306228|FBtr0306231|FBtr0306232|FBtr0306233|FBtr0306229 7054555|7054555|7054555|7054555|7054555|7054555 7054847|7054847|7056010|7054847|7056010|7056010 2L + 7054738 7054884 5'utr-coding milt FlyBase G2718.1 TCTGTTTAATACCCCGCATAATGCCTGTCATCGCCACCTTAAGCAACACTGGAAAGAAGGTTTTAGTGTTTGTAGCTGTGATTTGTAAATACATATATAGAGAAATGTTTAAATTTAGTAGTTATTAATCGAGTACTTCGCATATTA 603 7054820 0.84434385 30 565 5992 0.936528497 1.95604831 0.325129534 0.225538972 0.39507772 603 42 7 723 2L:7054738-7054884 8 milt FBtr0306233|FBtr0306229|FBtr0306230|FBtr0306228|FBtr0306231|FBtr0306232 7054555|7054555|7054555|7054555|7054555|7054555 7056010|7056010|7054847|7054847|7056010|7054847 AGCTGTGA 8mer-A1 dme-miR-1008-3p 2L + 7054741 7054867 5'utr-coding milt FlyBase G2145.1 GTTTAATACCCCGCATAATGCCTGTCATCGCCACCTTAAGCAACACTGGAAAGAAGGTTTTAGTGTTTGTAGCTGTGATTTGTAAATACATATATAGAGAAATGTTTAAATTTAGTAGTTATTAATC 451 7054820 0.872320436 28 417 4539 0.935714286 1.774848615 0.312857143 0.399113082 0.612857143 451 35 10 655 2L:7054741-7054867 8 456 440 FBgn0262872 1801.88 44.2 67.81666667 0.253069017 10.31674208 6.724010813 -9 -9 -9 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 2L 7055019 7055024 + 2L_7055019_7055024_+ 0.491325177 0.965618101 0.728471639 0.335375726 milt FBtr0306231|FBtr0306233|FBtr0306229 7054555|7054555|7054555 7056010|7056010|7056010 2L + 7054991 7055031 3'utr milt FlyBase G2721.1 ATTTTGCCAATTTTGTATTTATTTTCCCTGTGTTTATTACC 19 7055003 0.763425606 9 19 248 1 1.322219295 0.047619048 0.105263158 0.19047619 19 0 0 21 2L:7054991-7055031 6 milt FBtr0306233|FBtr0306229|FBtr0306231 7054555|7054555|7054555 7056010|7056010|7056010 TGTGTT 6mer3-8 dme-miR-317-3p 2L + 7054946 7055030 3'utr milt FlyBase G2146.1 ATAGAGAAACCGAGTTCCAAAGCAGCTATTTTTAATTTAAACTACATTTTGCCAATTTTGTATTTATTTTCCCTGTGTTTATTAC 22 7055002 0.990666913 13 21 229 0.926829268 1.579783597 0.024390244 0.727272727 0.853658537 22 3 0 38 2L:7054946-7055030 6 7 441 FBgn0262872 1801.88 44.2 67.81666667 0.003884831 0.158371041 0.103219464 16 17 16.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2L 7055393 7055399 + 2L_7055393_7055399_+ 0.659551502 0.660852545 0.660202023 0.000919946 milt FBtr0306231|FBtr0306233|FBtr0306229 7054555|7054555|7054555 7056010|7056010|7056010 2L + 7055363 7055433 3'utr milt FlyBase G2724.1 ACATAAATTATAGCGAAAAACGATTATTTTTCTAGTCCTACACTGGGTGGGTGCTCGTTTGGCTATGCAGA 73 7055392 0.848475309 11 70 658 0.964285714 1.908485019 0.095238095 0.095890411 0.214285714 73 3 0 81 2L:7055363-7055433 7 milt FBtr0306233|FBtr0306229|FBtr0306231 7054555|7054555|7054555 7056010|7056010|7056010 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2L + 7055372 7055428 3'utr milt FlyBase G2149.1 ATAGCGAAAAACGATTATTTTTCTAGTCCTACACTGGGTGGGTGCTCGTTTGGCTAT 38 7055392 0.609120628 6 37 350 0.962264151 1.707570176 0.056603774 0.342105263 0.528301887 38 2 0 51 2L:7055372-7055428 7 49.5 442 FBgn0262872 1801.88 44.2 67.81666667 0.027471308 1.119909502 0.729909069 1 1 1 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 2L 7062286 7062291 + 2L_7062286_7062291_+ 0.999876227 0.992403493 0.99613986 0.005283997 Mnn1 FBtr0079401|FBtr0110978 7061720|7061720 7062665|7063586 2L + 7062227 7062303 3'utr Mnn1 FlyBase G2734.1 ATTTATGATGTATTTTTAGCTGTTATACTTTATCCCCTATGTATTTATTGCTACAACTATGTGTTTTCCCCTCAAGC 16 7062287 0.987224303 7 16 142 1 1.278753601 0.157894737 0.125 0.263157895 16 0 0 19 2L:7062227-7062303 6 Mnn1 FBtr0079401|FBtr0110978 7061720|7061720 7062665|7063586 TGTGTT 6mer3-8 dme-miR-317-3p 2L + 7062259 7062300 3'utr Mnn1 FlyBase G2158.1 TCCCCTATGTATTTATTGCTACAACTATGTGTTTTCCCCTCA 8 7062292 0.982090946 4 8 60 1 1.176091259 0 0.5 0.733333333 8 0 0 15 2L:7062259-7062300 6 10 443 FBgn0031885 716.3333333 17.91333333 27.53333333 0.013959981 0.558243394 0.363196126 -1 -6 -3.5 0.25 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 2L 7062349 7062355 + 2L_7062349_7062355_+ 0.500545534 0.550288082 0.525416808 0.03517333 Mnn1 FBtr0079401|FBtr0110978 7061720|7061720 7062665|7063586 2L + 7062323 7062425 3'utr Mnn1 FlyBase G2735.1 TTTATTGTGTTTAAGCGTAACTTAATTGGTGCTTTTCTTCGAAAACGAATGAGAAATATAGGTTCTGTGTTTGATTTGATCACACCTTGAGGCAAAAATCTTG 157 7062348 0.85260619 15 153 1482 0.967567568 1.951823035 0.07027027 0.133757962 0.264864865 157 5 1 179 2L:7062323-7062425 7 Mnn1 FBtr0079401|FBtr0110978 7061720|7061720 7062665|7063586 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 2L + 7062325 7062425 3'utr Mnn1 FlyBase G2159.1 TATTGTGTTTAAGCGTAACTTAATTGGTGCTTTTCTTCGAAAACGAATGAGAAATATAGGTTCTGTGTTTGATTTGATCACACCTTGAGGCAAAAATCTTG 113 7062348 0.903132634 10 108 1064 0.970930233 1.921686475 0.063953488 0.336283186 0.563953488 113 4 1 167 2L:7062325-7062425 7 114 444 FBgn0031885 716.3333333 17.91333333 27.53333333 0.159143788 6.363974693 4.140435835 1 1 1 0.25 dme-miR-282-5p 7mer-A1 GAGGCTA 2L 7062515 7062521 + 2L_7062515_7062521_+ 0.644046595 0.661802362 0.652924479 0.012555247 Mnn1 FBtr0079401|FBtr0110978 7061720|7061720 7062665|7063586 2L + 7062437 7062559 3'utr Mnn1 FlyBase G2736.1 TTGAACAATAACCGAATTGAAGTCCAAATGGATAGACGGACTGCTCGTATTTATGTATTTACTTTAAAGCATTTTATTGAGGCTAAGCTGATTAATTTAACTCTATTTACATATATATCCTCT 239 7062513 0.985110033 18 235 1917 0.989619377 2.456366033 0.429065744 0.179916318 0.321799308 239 3 0 286 2L:7062437-7062559 7 Mnn1 FBtr0079401|FBtr0110978 7061720|7061720 7062665|7063586 GAGGCTA 7mer-A1 dme-miR-282-5p 2L + 7062493 7062541 3'utr Mnn1 FlyBase G2160.2 ATTTACTTTAAAGCATTTTATTGAGGCTAAGCTGATTAATTTAACTCTA 138 7062513 0.746333047 9 133 1089 0.969387755 2.278753601 0.459183673 0.333333333 0.530612245 138 6 0 190 2L:7062493-7062541 7 179 445 FBgn0031885 716.3333333 17.91333333 27.53333333 0.249883667 9.992556755 6.501210654 2 2 2 0.25 dme-miR-11-3p 8mer-m1 CTGTGATG 2L 7062969 7062976 + 2L_7062969_7062976_+ 0.335125015 0.354885936 0.345005476 0.013973066 Mnn1 FBtr0110978 7061720 7063586 2L + 7062950 7062983 3'utr Mnn1 FlyBase G2738.1 TGATTTGTGCGTAGAGCATCTGTGATGAATAATA 26 7062968 0.81241145 2 23 151 0.90625 1.462397998 0 0.192307692 0.34375 26 3 0 29 2L:7062950-7062983 8 Mnn1 FBtr0110978 7061720 7063586 CTGTGATG 8mer-m1 dme-miR-11-3p 2L + 7062946 7062995 3'utr Mnn1 FlyBase G2163.1 AATTTGATTTGTGCGTAGAGCATCTGTGATGAATAATAATGTTTAAAAAA 35 7062968 0.952450363 4 33 211 0.959183673 1.672097858 0 0.314285714 0.510204082 35 2 0 47 2L:7062946-7062995 8 30.5 446 FBgn0031885 716.3333333 17.91333333 27.53333333 0.042577943 1.702642352 1.107748184 1 1 1 0.25 dme-miR-318-3p 7mer-A1 CCAGTGA 2L 7069854 7069860 - 2L_7069854_7069860_- 0.814585971 0.779708821 0.797147396 0.024661905 Pvf2 FBtr0079423 7069534 7070160 2L - 7069819 7069887 3'utr Pvf2 FlyBase G8420.1 AATCTTAATTAAGCTGAGTTTAAGATGCCAGTGAAACTAGATAAAATCAGACATTGAGAACTGAAAGTA 23 7069833 0.946241372 6 23 99 1 1.414973348 0.192307692 0.086956522 0.192307692 23 0 0 26 2L:7069819-7069887 7 Pvf2 FBtr0079423 7069534 7070160 CCAGTGA 7mer-A1 dme-miR-318-3p 2L - 7069817 7069877 3'utr Pvf2 FlyBase G6545.1 AAGCTGAGTTTAAGATGCCAGTGAAACTAGATAAAATCAGACATTGAGAACTGAAAGTATT 13 7069833 0.737697084 5 13 55 1 1.301029996 0.15 0.230769231 0.5 13 0 0 20 2L:7069817-7069877 7 8 447 FBgn0031888 877.1766667 51.15666667 78.84 0.00912017 0.156382355 0.101471334 -27 -27 -27 0.25 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 7099159 7099166 - 2L_7099159_7099166_- 0.629956226 0.630008278 0.629982252 3.68E-05 Pvf3 FBtr0112612|FBtr0342658 7098186|7098186 7100092|7100092 2L - 7099152 7099189 3'utr Pvf3 FlyBase G8436.1 AAATTAAATTTTCATATTTAATTTCTAGTCAAATTTTC 68 7099167 0.743921356 4 67 723 0.988372093 1.929418926 0 0.235294118 0.395348837 68 1 0 85 2L:7099152-7099189 8 Pvf3 FBtr0112612|FBtr0342658 7098186|7098186 7100092|7100092 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 7099151 7099178 3'utr Pvf3 FlyBase G6556.1 TCATATTTAATTTCTAGTCAAATTTTCA 32 7099167 0.738120811 2 32 330 1 1.544068044 0 0.09375 0.171428571 32 0 0 35 2L:7099151-7099178 8 49.5 448 FBgn0085407 30.66666667 0.876666667 1.326666667 1.614130435 56.46387833 37.31155779 1 1 1 0.25 dme-miR-1012-3p 6mer3-8 TTGACT 2L 7099396 7099401 - 2L_7099396_7099401_- 0.933298162 0.990255309 0.961776735 0.040274752 Pvf3 FBtr0112612|FBtr0342658 7098186|7098186 7100092|7100092 2L - 7099375 7099435 3'utr Pvf3 FlyBase G8438.1 ATGCGTATGCTAAATGAAATTCCAAATATATAAATTGACTGCGTTTTTAGTTTTAATTGAC 29 7099401 0.893762097 12 28 353 0.96875 1.491361694 0.09375 0.103448276 0.1875 29 1 0 31 2L:7099375-7099435 6 Pvf3 FBtr0112612|FBtr0342658 7098186|7098186 7100092|7100092 TTGACT 6mer3-8 dme-miR-1012-3p 2L - 7099376 7099428 3'utr Pvf3 FlyBase G6558.1 TGCTAAATGAAATTCCAAATATATAAATTGACTGCGTTTTTAGTTTTAATTGA 14 7099401 0.994798206 9 11 153 0.869565217 1.301029996 0 0.428571429 0.652173913 14 3 0 20 2L:7099376-7099428 6 18 449 FBgn0085407 30.66666667 0.876666667 1.326666667 0.586956522 20.53231939 13.5678392 0 0 0 0.25 dme-miR-14-3p 6mer3-8 AAGACT 2L 7099561 7099566 - 2L_7099561_7099566_- 0.934620829 0.73416489 0.834392859 0.141743726 Pvf3 FBtr0112612|FBtr0342658 7098186|7098186 7100092|7100092 2L - 7099549 7099594 3'utr Pvf3 FlyBase G8439.1 AAAAATCTGTATCTTAGCAAATGGAAATAAGACTTTTTTGCGCATG 62 7099559 0.755324505 6 61 536 0.960526316 1.86332286 0.026315789 0.161290323 0.315789474 62 3 0 73 2L:7099549-7099594 6 Pvf3 FBtr0112612|FBtr0342658 7098186|7098186 7100092|7100092 AAGACT 6mer3-8 dme-miR-14-3p 2L - 7099552 7099590 3'utr Pvf3 FlyBase G6559.1 ATCTGTATCTTAGCAAATGGAAATAAGACTTTTTTGCGC 28 7099559 0.69526919 4 23 213 0.904761905 1.579783597 0.047619048 0.321428571 0.547619048 28 4 0 38 2L:7099552-7099590 6 44.5 450 FBgn0085407 30.66666667 0.876666667 1.326666667 1.451086957 50.76045627 33.54271357 -7 -7 -7 0.25 dme-miR-190-5p 6mer2-7 CATATC 2L 7099946 7099951 - 2L_7099946_7099951_- 0.627938684 0.84014195 0.734040317 0.150050322 Pvf3 FBtr0112611|FBtr0112612|FBtr0301525|FBtr0342658 7099690|7098186|7099690|7098186 7100092|7100092|7100092|7100092 2L - 7099941 7099988 3'utr Pvf3 FlyBase G8441.1 AAGAGTAAAGGCGAAATGAGAGACGTGAATTTAGTTGCATATCCTATA 6 7099959 0.957615934 3 6 32 1 0.77815125 0.5 0 0 6 0 0 6 2L:7099941-7099988 6 Pvf3 FBtr0112611|FBtr0112612|FBtr0301525|FBtr0342658 7099690|7098186|7099690|7098186 7100092|7100092|7100092|7100092 CATATC 6mer2-7 dme-miR-190-5p 2L - 7099941 7099986 3'utr Pvf3 FlyBase G6560.1 GAGTAAAGGCGAAATGAGAGACGTGAATTTAGTTGCATATCCTATA 6 7099972 0.999004622 4 6 30 1 0.77815125 0.5 0 0 6 0 0 6 2L:7099941-7099986 6 2.5 451 FBgn0085407 30.66666667 0.876666667 1.326666667 0.081521739 2.851711027 1.884422111 8 21 14.5 0.25 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 7185351 7185358 + 2L_7185351_7185358_+ 0.459614666 0.425919317 0.442766991 0.023826246 CG4495 FBtr0079405|FBtr0113028 7185291|7185291 7185519|7185529 2L + 7185317 7185388 3'utr CG4495 FlyBase G2745.1 CGCTTCAAGCGCCCCAATCTTAGTCACTTTTTCCTACGCTTACGCTTTTTACTATTTATTTTTGTAGTTAAC 34 7185355 0.991689567 8 33 357 1 1.633468456 0.023255814 0.264705882 0.418604651 34 0 0 43 2L:7185317-7185388 8 CG4495 FBtr0079405|FBtr0113028 7185291|7185291 7185519|7185529 TACGCTTA 8mer-A1 dme-miR-965-3p 2L + 7185306 7185371 3'utr CG4495 FlyBase G2169.1 GTGGATTCTCCCGCTTCAAGCGCCCCAATCTTAGTCACTTTTTCCTACGCTTACGCTTTTTACTAT 21 7185356 0.912091063 9 20 199 0.967741935 1.477121255 0 0.380952381 0.580645161 21 1 0 30 2L:7185306-7185371 8 23.5 452 FBgn0031893 272.69 17.27 26.35 0.086178444 1.36074117 0.891840607 -4 -5 -4.5 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 2L 7190783 7190788 - 2L_7190783_7190788_- 0.977815655 0.891546362 0.934681008 0.061001607 CG4497 FBtr0079418|FBtr0302948 7190429|7190429 7191401|7191401 2L - 7190748 7190814 3'utr CG4497 FlyBase G8445.1 TAGCCAGAGTTTATTGCCTCGATCTTTGTGTTATAGAATGTTTTCCCATTTCCAATGTTTCGGTTAA 15 7190790 0.986409356 6 15 131 1 1.230448921 0.058823529 0.133333333 0.235294118 15 0 0 17 2L:7190748-7190814 6 CG4497 FBtr0079418|FBtr0302948 7190429|7190429 7191401|7191401 TGTGTT 6mer3-8 dme-miR-317-3p 2L - 7190773 7190809 3'utr CG4497 FlyBase G6562.1 AGAGTTTATTGCCTCGATCTTTGTGTTATAGAATGTT 10 7190789 0.694115088 5 10 98 1 1.204119983 0 0.6 0.75 10 0 0 16 2L:7190773-7190809 6 9 453 FBgn0031895 127.87 6.053333333 9.286666667 0.070383984 1.486784141 0.969131371 2 1 1.5 0.25 dme-miR-8-3p 7mer-A1 AGTATTA 2L 7195195 7195201 - 2L_7195195_7195201_- 0.807044028 0.81734285 0.812193439 0.007282351 CG4502 FBtr0079416|FBtr0079417 7194906|7194906 7195555|7195555 2L - 7195175 7195214 3'utr CG4502 FlyBase G8451.1 AAATGGATATTTAAGTATTATTAGTTAAACAGGAACAAAA 11 7195205 0.992192846 5 9 109 0.846153846 1.041392685 0.307692308 0.181818182 0.307692308 11 2 0 11 2L:7195175-7195214 7 CG4502 FBtr0079416|FBtr0079417 7194906|7194906 7195555|7195555 AGTATTA 7mer-A1 dme-miR-8-3p 2L - 7195176 7195236 3'utr CG4502 FlyBase G6566.1 ATAGGAAGTTTCGCCGAATACAAAATGGATATTTAAGTATTATTAGTTAAACAGGAACAAA 11 7195204 0.992249327 5 8 83 0.769230769 0.698970004 0.230769231 0.181818182 0.307692308 11 2 1 10 2L:7195176-7195236 7 10 454 FBgn0031896 751.2833333 44.36333333 68.21333333 0.013310557 0.225411376 0.146598905 4 3 3.5 0.25 dme-miR-33-5p 8mer-A1 CAATGCAA 2L 7195488 7195495 - 2L_7195488_7195495_- 0.572435402 0.506347712 0.539391557 0.046731061 CG4502 FBtr0079416|FBtr0079417 7194906|7194906 7195555|7195555 2L - 7195480 7195535 3'utr CG4502 FlyBase G8453.1 AGGAAACTCAGCTCAGATGCTCTGCGTTTGCCAACACAACCAATGCAATTTAATAA 16 7195518 0.774238376 7 14 78 0.904761905 0.977723605 0.047619048 0.3125 0.476190476 16 1 1 19 2L:7195480-7195535 8 CG4502 FBtr0079416|FBtr0079417 7194906|7194906 7195555|7195555 CAATGCAA 8mer-A1 dme-miR-33-5p 2L - 7195442 7195548 3'utr CG4502 FlyBase G6567.2 ATTCCGGACCGCAAGGAAACTCAGCTCAGATGCTCTGCGTTTGCCAACACAACCAATGCAATTTAATAATCAGCCACCCAGCCAAGTTCGCTCATAGTAATACATCA 23 7195518 0.971582171 8 21 121 0.95 1.579783597 0.1 0.434782609 0.675 23 2 0 38 2L:7195442-7195548 8 6 455 FBgn0031896 751.2833333 44.36333333 68.21333333 0.007986334 0.135246825 0.087959343 23 23 23 0.25 dme-miR-1003-3p 8mer-A1 ATGTGAGA 2L 7205677 7205684 - 2L_7205677_7205684_- 0.619423508 0.622837483 0.621130495 0.002414063 CG13784 FBtr0110799|FBtr0330197|FBtr0330199|FBtr0330198 7205251|7204536|7205251|7205251 7208015|7208015|7206347|7206347 2L - 7205634 7205714 3'utr CG13784 FlyBase G8460.1 AGAACATAAAACCAATGTACATTACTTCTTATGTGAGATGCAGCTACAAAAATTAGCTTACAATGTAAACTAGTTTTAAAC 95 7205677 0.828359519 13 90 691 0.946428571 1.72427587 0.017857143 0.147368421 0.276785714 95 5 1 106 2L:7205634-7205714 8 CG13784 FBtr0330198|FBtr0330199|FBtr0330197|FBtr0110799 7205251|7205251|7204536|7205251 7206347|7206347|7208015|7208015 ATGTGAGA 8mer-A1 dme-miR-1003-3p 2L - 7205582 7205717 3'utr CG13784 FlyBase G6573.1 ACTAGAACATAAAACCAATGTACATTACTTCTTATGTGAGATGCAGCTACAAAAATTAGCTTACAATGTAAACTAGTTTTAAACATTTAGTTTCGGACAATGTGAATTTAAAGAAAAGGGTTTCAGCTGGGGAAGG 77 7205677 0.984363879 17 71 562 0.924369748 1.740362689 0.12605042 0.38961039 0.605042017 77 8 1 110 2L:7205582-7205717 8 66 456 FBgn0031897 1244.07 88.35 137.0766667 0.053051677 0.747028862 0.481482382 -7 -7 -7 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 7220413 7220420 - 2L_7220413_7220420_- 0.635120732 0.623376873 0.629248802 0.008304121 ico FBtr0079413|FBtr0079413|FBtr0079413 7220367|7220367|7220367 7220532|7220532|7220532 2L - 7220382 7220440 3'utr ico FlyBase G8472.1 ACAACAATTTTCAGTTTTCACTGTGATAAATGCGAAGTGTACAGTTATTTGTATAATAA 23 7220425 0.987635954 8 20 183 0.870967742 1.431363764 0.096774194 0.304347826 0.483870968 23 4 0 27 2L:7220382-7220440 8 ico FBtr0079413|FBtr0079413|FBtr0079413 7220367|7220367|7220367 7220532|7220532|7220532 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 7220401 7220429 3'utr ico FlyBase G6584.1 CAGTTTTCACTGTGATAAATGCGAAGTGT 14 7220424 0.834684988 4 10 106 0.823529412 1.146128036 0 0.214285714 0.352941176 14 3 0 14 2L:7220401-7220429 8 18.5 457 FBgn0263133 394.38 19.21 29.5 0.046909072 0.963040083 0.627118644 5 4 4.5 0.25 dme-miR-277-3p 7mer-m8 TGCATTT 2L 7226705 7226711 - 2L_7226705_7226711_- 0.61979914 0.592341917 0.606070528 0.019415172 Ndae1 FBtr0331659|FBtr0331662|FBtr0299538|FBtr0331661|FBtr0331663|FBtr0331660|FBtr0299537 7226136|7226136|7226460|7226460|7226460|7226460|7226460 7226914|7226914|7226914|7226914|7226914|7226914|7226914 2L - 7226681 7226758 3'utr Ndae1 FlyBase G8477.1 ACAAAACCAACGATAAACTCAATTATTTATAGATTTTTTTAATAATTTGCATTTTGTCGGCCTTGATACATTTTATTG 12 7226695 0.987914998 5 11 113 0.916666667 1.041392685 0 0 0 12 1 0 11 2L:7226681-7226758 7 Ndae1 FBtr0299537|FBtr0331660|FBtr0331663|FBtr0331661|FBtr0299538|FBtr0331662|FBtr0331659 7226460|7226460|7226460|7226460|7226460|7226136|7226136 7226914|7226914|7226914|7226914|7226914|7226914|7226914 TGCATTT 7mer-m8 dme-miR-277-3p 2L - 7226673 7226759 3'utr Ndae1 FlyBase G6588.1 CACAAAACCAACGATAAACTCAATTATTTATAGATTTTTTTAATAATTTGCATTTTGTCGGCCTTGATACATTTTATTGAACTAGTT 8 7226712 0.989669798 6 8 78 1 1.041392685 0 0.25 0.454545455 8 0 0 11 2L:7226673-7226759 7 6.5 458 FBgn0259111 820.0933333 22.69 34.66 0.007925927 0.28646981 0.187536065 -16 1 -7.5 0.25 dme-miR-1003-3p 7mer-A1 TGTGAGA 2L 7384830 7384836 - 2L_7384830_7384836_- 0.655407106 0.463474018 0.559440562 0.135717197 CG5149 FBtr0079469 7384484 7384886 2L - 7384781 7384859 3'utr CG5149 FlyBase G8486.1 GTTTTGTTTTATCATCGAGAATTTGTGAGACCATGCCCGATATGGGTGTGCAGTTAATGATTCAATTCAGTTTCCTTAG 20 7384837 0.979498461 5 20 144 1 1.361727836 0.304347826 0.15 0.260869565 20 0 0 23 2L:7384781-7384859 7 CG5149 FBtr0079469 7384484 7384886 TGTGAGA 7mer-A1 dme-miR-1003-3p 2L - 7384818 7384860 3'utr CG5149 FlyBase G6592.1 AGTTTTGTTTTATCATCGAGAATTTGTGAGACCATGCCCGATA 14 7384838 0.93459576 3 14 76 1 1.255272505 0.166666667 0.214285714 0.388888889 14 0 0 18 2L:7384818-7384860 7 15.5 459 FBgn0031904 297.6666667 19.02666667 29.12333333 0.052071669 0.814646111 0.532219297 1 2 1.5 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2L 7472626 7472632 - 2L_7472626_7472632_- 0.66790922 0.670664581 0.6692869 0.001948362 Ziz FBtr0330722|FBtr0330726|FBtr0330724|FBtr0332201|FBtr0330721|FBtr0330728|FBtr0330723|FBtr0330725|FBtr0330727 7472511|7472511|7472511|7472511|7472511|7472511|7472511|7472511|7472511 7473645|7473645|7473645|7473110|7473645|7473645|7473645|7473645|7473645 2L - 7472604 7472682 3'utr Ziz FlyBase G8509.1 GAAATTAGTTTTAGTGTTAGACAAATAAGTTCCCGCAAGCAACAGAACTTACCAAAGTATTCAGATAAAGGAAAAACCT 109 7472633 0.796257468 8 108 470 0.991935484 2.089905111 0.048387097 0.119266055 0.225806452 109 1 0 123 2L:7472604-7472682 7 Ziz FBtr0330725|FBtr0330727|FBtr0330728|FBtr0330723|FBtr0332201|FBtr0330721|FBtr0330722|FBtr0330726|FBtr0330724 7472511|7472511|7472511|7472511|7472511|7472511|7472511|7472511|7472511 7473645|7473645|7473645|7473645|7473110|7473645|7473645|7473645|7473645 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 7472539 7472680 3'utr Ziz FlyBase G6606.1 AATTAGTTTTAGTGTTAGACAAATAAGTTCCCGCAAGCAACAGAACTTACCAAAGTATTCAGATAAAGGAAAAACCTATTTAACAGATCTACGGATATATATTTACATACATGCATTTTCTAGTGAAATCGTATAATGAACT 104 7472633 0.971371604 15 100 586 0.959183673 1.672097858 0.020408163 0.346153846 0.537414966 104 4 2 141 2L:7472539-7472680 7 83.5 460 FBgn0260486 1355.053333 19.13333333 29.37 0.061621191 4.364111498 2.843037113 1 1 1 0.25 dme-miR-980-5p 6mer2-7 AAAAAC 2L 7723243 7723248 - 2L_7723243_7723248_- 0.746274365 0.736704604 0.741489485 0.00676687 CG13795 FBtr0343407 7723043 7723555 2L - 7723238 7723286 3'utr CG13795 FlyBase G8579.1 TTACATAGTTTGTCTATCGAGAGAGAGAGAGAGCTTTTAAAAACGTGTA 26 7723250 0.74404892 6 25 125 0.965517241 1.447158031 0.103448276 0.115384615 0.206896552 26 1 0 28 2L:7723238-7723286 6 CG13795 FBtr0343407 7723043 7723555 AAAAAC 6mer2-7 dme-miR-980-5p 2L - 7723239 7723277 3'utr CG13795 FlyBase G6651.1 TTGTCTATCGAGAGAGAGAGAGAGCTTTTAAAAACGTGT 16 7723250 0.717494537 3 16 80 1 1.380211242 0.041666667 0.4375 0.625 16 0 0 24 2L:7723239-7723277 6 18.5 461 FBgn0031937 195.5733333 10.18333333 15.44666667 0.094593673 1.816693944 1.1976694 2 2 2 0.25 dme-miR-305-3p 7mer-m8 ATGTGCC 2L 7786514 7786520 - 2L_7786514_7786520_- 0.644188172 0.647338908 0.64576354 0.002227881 CG7149 FBtr0079496 7786158 7786899 2L - 7786496 7786537 3'utr CG7149 FlyBase G8600.1 ATGATCCGATAAGTATTATGTGCCTGAAGACAGCTACTGAAT 119 7786519 0.694548704 4 119 689 1 2.158362492 0.159722222 0.159663866 0.305555556 119 0 0 144 2L:7786496-7786537 7 CG7149 FBtr0079496 7786158 7786899 ATGTGCC 7mer-m8 dme-miR-305-3p 2L - 7786495 7786540 3'utr CG7149 FlyBase G6663.1 TGCATGATCCGATAAGTATTATGTGCCTGAAGACAGCTACTGAATG 79 7786519 0.688869565 4 79 451 1 2.06069784 0.243478261 0.291139241 0.513043478 79 0 0 115 2L:7786495-7786540 7 99 462 FBgn0031948 141.2833333 6.946666667 10.71666667 0.700719594 14.25143954 9.237947123 -1 -1 -1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 7786831 7786837 - 2L_7786831_7786837_- 0.794127803 0.795002817 0.79456531 0.000618718 CG7149 FBtr0079496|FBtr0079496|FBtr0079496|FBtr0343406|FBtr0343406|FBtr0343406 7786158|7786158|7786158|7786158|7786158|7786158 7786899|7786899|7786899|7786899|7786899|7786899 2L - 7786804 7786852 3'utr CG7149 FlyBase G8601.1 CAAAATCAACCATCTTGTGATATATAGTATATATACATATATATATAAA 27 7786839 0.9920715 6 20 234 0.724137931 0.720159303 0.034482759 0.074074074 0.137931034 27 5 3 21 2L:7786804-7786852 7 CG7149 FBtr0079496|FBtr0079496|FBtr0079496|FBtr0343406|FBtr0343406|FBtr0343406 7786158|7786158|7786158|7786158|7786158|7786158 7786899|7786899|7786899|7786899|7786899|7786899 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 7786814 7786852 3'utr CG7149 FlyBase G6665.1 CAAAATCAACCATCTTGTGATATATAGTATATATACATA 16 7786838 0.743488012 4 14 137 0.875 1.021189299 0 0.3125 0.541666667 16 2 1 21 2L:7786814-7786852 7 21 463 FBgn0031948 141.2833333 6.946666667 10.71666667 0.14863749 3.02303263 1.959564541 2 1 1.5 0.25 dme-miR-278-3p 7mer-m8 CCCACCG 2L 7791689 7791695 - 2L_7791689_7791695_- 0.603530339 0.56272111 0.583125725 0.028856462 LKR FBtr0079495|FBtr0343404 7791404|7791173 7791757|7791757 2L - 7791651 7791805 stop_codon LKR FlyBase G8606.1 CGCTCCGAGGGTCTGACTGCCACGGAAACCTCCAGATGGCTAAATTAAGTGATCTTAACTGATCCCGAGAAAATAGGCTTAAGTCTTCATTAATATTACTTTTTTGACTGCCCACCGCGTCGGGTGATACTTCTTGTTTTATCGCTCGGGTATTT 206 7791686 0.978352842 24 189 1276 0.925925926 1.653212514 0.152263374 0.165048544 0.29218107 206 14 4 225 2L:7791651-7791805 7 LKR FBtr0079495|FBtr0343404 7791404|7791173 7791757|7791757 CCCACCG 7mer-m8 dme-miR-278-3p 2L - 7791654 7791805 stop_codon LKR FlyBase G6669.1 CGCTCCGAGGGTCTGACTGCCACGGAAACCTCCAGATGGCTAAATTAAGTGATCTTAACTGATCCCGAGAAAATAGGCTTAAGTCTTCATTAATATTACTTTTTTGACTGCCCACCGCGTCGGGTGATACTTCTTGTTTTATCGCTCGGGTA 131 7791686 0.964811439 20 115 750 0.882051282 1.758407192 0.174358974 0.351145038 0.564102564 131 21 2 172 2L:7791654-7791805 7 87 464 FBgn0025687 1820.93 67.29333333 103.6233333 0.047777784 1.292847236 0.839579245 -9 -9 -9 0.25 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 7796640 7796645 - 2L_7796640_7796645_- 0.999179166 0.693574538 0.846376852 0.216095156 Herp FBtr0343403|FBtr0079493 7796312|7796544 7796929|7796929 2L - 7796624 7796665 3'utr Herp FlyBase G8627.1 AAGAACGTACTCTGTTTTTGATGTGAATAGTAGAATGTTTAT 7 7796650 0.986193808 7 7 59 1 1 0.3 0.285714286 0.5 7 0 0 10 2L:7796624-7796665 6 Herp FBtr0343403|FBtr0079493 7796312|7796544 7796929|7796929 ATGTGA 6mer3-8 dme-miR-1003-3p 2L - 7796571 7796657 3'utr Herp FlyBase G6686.1 ACTCTGTTTTTGATGTGAATAGTAGAATGTTTATAATCTGCACTGCAATCTGTGCTAGAGACGAACCTATGAAACCAAGATGCAATT 11 7796648 0.985970738 7 10 79 0.9375 1.176091259 0.0625 0.454545455 0.625 11 1 0 15 2L:7796571-7796657 6 5.5 465 FBgn0031950 371.7266667 21.11 32.2 0.014795818 0.260540028 0.170807453 5 3 4 0.25 dme-miR-14-3p 6mer3-8 AAGACT 2L 7892660 7892665 - 2L_7892660_7892665_- 0.592592547 0.879007755 0.735800151 0.202526201 Snoo FBtr0112719|FBtr0112718|FBtr0343409 7892323|7891185|7892323 7894084|7894084|7894084 2L - 7892606 7892685 3'utr Snoo FlyBase G8662.1 ACGTTTGCTAACTAGTTCTTAAGACTTCCCTCCGGCGAAGTTCTTTCCCTATTGTGAATGGCATCGAATGGTCCCCCTTT 25 7892660 0.843977212 5 24 196 0.964285714 1.431363764 0.035714286 0.12 0.214285714 25 1 0 27 2L:7892606-7892685 6 Snoo FBtr0112719|FBtr0112718|FBtr0343409 7892323|7891185|7892323 7894084|7894084|7894084 AAGACT 6mer3-8 dme-miR-14-3p 2L - 7892608 7892679 3'utr Snoo FlyBase G6717.1 GCTAACTAGTTCTTAAGACTTCCCTCCGGCGAAGTTCTTTCCCTATTGTGAATGGCATCGAATGGTCCCCCT 23 7892660 0.979164065 7 22 157 0.935483871 0.985276743 0.096774194 0.217391304 0.419354839 23 0 2 29 2L:7892608-7892679 6 12 466 FBgn0085450 1551.763333 25.89666667 39.58333333 0.007733138 0.4633801 0.303157895 -5 -5 -5 0.25 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 8039206 8039211 + 2L_8039206_8039211_+ 0.996676796 0.747198565 0.871937681 0.176407727 Cka FBtr0306001|FBtr0079537 8038200|8038200 8040826|8040826 2L + 8039176 8039241 3'utr Cka FlyBase G2898.1 ATTAATTAGAGGACAGTCGAGGTGAGACTTTGATGAACGGCGGCCGGGTTTATATACGCAGGTAGC 34 8039206 0.757407323 7 34 168 1 1.579783597 0.421052632 0.088235294 0.184210526 34 0 0 38 2L:8039176-8039241 6 Cka FBtr0079537|FBtr0306001 8038200|8038200 8040826|8040826 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L + 8039176 8039229 3'utr Cka FlyBase G2289.1 ATTAATTAGAGGACAGTCGAGGTGAGACTTTGATGAACGGCGGCCGGGTTTATA 23 8039206 0.959537009 6 23 115 1 1.491361694 0.516129032 0.260869565 0.451612903 23 0 0 31 2L:8039176-8039229 6 27 467 FBgn0044323 2376.946667 58.08333333 89.27666667 0.011359111 0.464849354 0.302430646 0 0 0 0.25 dme-miR-2a-2-5p 7mer-A1 GATGAGA 2L 8039372 8039378 + 2L_8039372_8039378_+ 0.709429253 0.728799979 0.719114616 0.013697153 Cka FBtr0306001|FBtr0079537 8038200|8038200 8040826|8040826 2L + 8039304 8039411 3'utr Cka FlyBase G2899.1 ATATAATTTCAATTGTCATTACCAAGGGGAGTACGCAATGCTTGATGGATTAACCACGACCATGTGAGGATGAGATATAAATAATAACTGCAGGCAAGCTATAAACGT 18 8039391 0.937994938 13 17 82 0.954545455 1.322219295 0.409090909 0.222222222 0.363636364 18 1 0 21 2L:8039304-8039411 7 Cka FBtr0079537|FBtr0306001 8038200|8038200 8040826|8040826 GATGAGA 7mer-A1 dme-miR-2a-2-5p 2L + 8039316 8039417 3'utr Cka FlyBase G2290.1 TTGTCATTACCAAGGGGAGTACGCAATGCTTGATGGATTAACCACGACCATGTGAGGATGAGATATAAATAATAACTGCAGGCAAGCTATAAACGTATGCTA 15 8039373 0.955696432 8 15 70 1 1.397940009 0.08 0.533333333 0.72 15 0 0 25 2L:8039316-8039417 7 6.5 468 FBgn0044323 2376.946667 58.08333333 89.27666667 0.002734601 0.111908178 0.072807378 -19 -1 -10 0.25 dme-miR-318-3p 6mer3-8 CCCAGT 2L 8053828 8053833 + 2L_8053828_8053833_+ 0.954729536 0.873374298 0.914051917 0.057526814 CG7466 FBtr0344789|FBtr0344788 8053047|8053047 8054326|8054326 2L + 8053804 8053849 3'utr CG7466 FlyBase G2914.1 AAAGTATTAATTATGATATTCCTTCCCAGTTGTGGTGGCTAGCATT 33 8053822 0.650022033 7 32 300 0.974358974 1.579783597 0.128205128 0.151515152 0.282051282 33 1 0 38 2L:8053804-8053849 6 CG7466 FBtr0344789|FBtr0344788 8053047|8053047 8054326|8054326 CCCAGT 6mer3-8 dme-miR-318-3p 2L + 8053809 8053848 3'utr CG7466 FlyBase G2301.1 ATTAATTATGATATTCCTTCCCAGTTGTGGTGGCTAGCAT 15 8053822 0.671704879 4 12 135 0.80952381 0.62838893 0.333333333 0.333333333 0.523809524 15 1 3 17 2L:8053809-8053848 6 23.5 469 FBgn0031981 647.3533333 7.71 11.75333333 0.036301659 3.047989624 1.999432785 6 6 6 0.25 dme-miR-184-3p 8mer-A1 TCCGTCCA 2L 8074805 8074812 - 2L_8074805_8074812_- 0.563319512 0.563798698 0.563559105 0.000338846 Mcr FBtr0079543 8074115 8074955 2L - 8074780 8074841 3'utr Mcr FlyBase G8830.2 AGTTTTTTTGTTTGCCAACGAAATTGCATTCCGTCCAAAAATGCTGGTCAACATTTTGGTTT 5777 8074813 0.742386623 15 5720 31649 0.991896976 2.689879423 0.277239184 0.157348105 0.295615685 5777 43 13 6855 2L:8074780-8074841 8 Mcr FBtr0079543 8074115 8074955 TCCGTCCA 8mer-A1 dme-miR-184-3p 2L - 8074764 8074841 3'utr Mcr FlyBase G6862.1 AGTTTTTTTGTTTGCCAACGAAATTGCATTCCGTCCAAAAATGCTGGTCAACATTTTGGTTTTATTTTTAGTTCTTTT 3688 8074813 0.924325697 17 3625 19427 0.983850481 2.558068254 0.288332426 0.369577007 0.578116494 3688 75 14 5422 2L:8074764-8074841 8 4719 470 FBgn0267488 1127.406667 21.51 32.91333333 4.185712343 219.3863319 143.3765445 1 1 1 0.25 dme-miR-304-5p 7mer-m8 TGAGATT 2L 8109358 8109364 + 2L_8109358_8109364_+ 0.510965734 0.618552148 0.564758941 0.076075073 Bsg FBtr0079570|FBtr0079567|FBtr0079571|FBtr0079568|FBtr0079566|FBtr0079572|FBtr0079569|FBtr0079573 8107883|8107883|8107883|8107883|8107883|8107883|8107883|8107883 8109458|8109458|8116531|8116531|8109458|8109458|8109458|8109458 2L + 8109288 8109413 stop_codon Bsg FlyBase G2938.2 TGTATCTAGTATCTAAACACTTGTGCTATTCTCTACCGATTACAACTATCCATTATGATTTTGTGAGTTTTGAGATTGATTTCTACCGAAATATAAAACAAACAACAACAACAAAAAATACAATTG 182 8109358 0.985359599 23 171 1745 0.952380952 1.823908741 0.076190476 0.142857143 0.257142857 182 8 2 200 2L:8109288-8109413 7 Bsg FBtr0079569|FBtr0079573|FBtr0079566|FBtr0079572|FBtr0079571|FBtr0079568|FBtr0079570|FBtr0079567 8107883|8107883|8107883|8107883|8107883|8107883|8107883|8107883 8109458|8109458|8109458|8109458|8116531|8116531|8109458|8109458 TGAGATT 7mer-m8 dme-miR-304-5p 2L + 8109283 8109386 stop_codon Bsg FlyBase G2327.1 TTCTTTGTATCTAGTATCTAAACACTTGTGCTATTCTCTACCGATTACAACTATCCATTATGATTTTGTGAGTTTTGAGATTGATTTCTACCGAAATATAAAAC 113 8109358 0.871448912 26 110 1107 0.973856209 1.872156273 0.078431373 0.283185841 0.470588235 113 3 1 149 2L:8109283-8109386 7 83.5 471 FBgn0261822 8004.233333 323.89 495.0033333 0.01043198 0.257803575 0.168685733 0 0 0 0.25 dme-miR-252-5p 7mer-m8 GTACTTA 2L 8117339 8117345 - 2L_8117339_8117345_- 0.586780907 0.571735399 0.579258153 0.010638775 mon2 FBtr0339674|FBtr0301229 8117290|8116963 8117519|8117519 2L - 8117311 8117357 3'utr mon2 FlyBase G8843.1 CTAAGCATCTATGTACTTACATACATACCTAAACATATATATATATA 8 8117346 0.979569678 3 8 61 1 0.954242509 0 0.125 0.222222222 8 0 0 9 2L:8117311-8117357 7 mon2 FBtr0339674|FBtr0301229 8117290|8116963 8117519|8117519 GTACTTA 7mer-m8 dme-miR-252-5p 2L - 8117333 8117396 3'utr mon2 FlyBase G6869.1 GAATGTTAATCTTAGCCCTCCCTCGCATAGATGTAACGACTAAGCATCTATGTACTTACATACA 9 8117346 0.733078333 5 7 57 0.941176471 1.204119983 0.705882353 0.444444444 0.705882353 9 1 0 16 2L:8117333-8117396 7 6.5 472 FBgn0031985 610.5 12.61 19.26333333 0.010647011 0.515463918 0.337428621 1 1 1 0.25 dme-miR-79-3p 7mer-A1 AGCTTTA 2L 8134398 8134404 - 2L_8134398_8134404_- 0.788678776 0.792239369 0.790459072 0.002517724 CG8552 FBtr0339673|FBtr0302595|FBtr0344863|FBtr0079641 8134245|8134245|8134245|8134245 8134622|8134622|8134622|8134622 2L - 8134308 8134424 3'utr CG8552 FlyBase G8873.1 AAAACCGTAGCAAGTTCTTGAGCTTTACAAAATTACCTATGTATTGATCGGATTGGCACCCATGAGACCTATTTGTTATTTTTGTAATATCGCCTGTGTAACAACTAACTTTGTAAC 37 8134406 0.971145721 11 36 275 0.979166667 1.672097858 0.104166667 0.243243243 0.416666667 37 1 0 47 2L:8134308-8134424 7 CG8552 FBtr0344863|FBtr0079641|FBtr0339673|FBtr0302595 8134245|8134245|8134245|8134245 8134622|8134622|8134622|8134622 AGCTTTA 7mer-A1 dme-miR-79-3p 2L - 8134305 8134424 3'utr CG8552 FlyBase G6888.1 AAAACCGTAGCAAGTTCTTGAGCTTTACAAAATTACCTATGTATTGATCGGATTGGCACCCATGAGACCTATTTGTTATTTTTGTAATATCGCCTGTGTAACAACTAACTTTGTAACATT 13 8134406 0.982793012 8 12 96 1 1.322219295 0.142857143 0.538461538 0.714285714 13 0 0 21 2L:8134305-8134424 7 13 473 FBgn0031990 1987.903333 36.46 55.94333333 0.006539553 0.356555129 0.232378002 2 2 2 0.25 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 818310 818317 - 2L_818310_818317_- 0.617282102 0.618574265 0.617928183 0.000913723 CG3876 FBtr0078039 818077 818506 2L - 818272 818375 3'utr CG3876 FlyBase G6659.1 GAGGGATTCCGAGAGGAGACGATTCAGTATGACAGGATCTGATGCATACACACGCTTTTAGCTTTAGGCTCTAACACGATTTTACACCTAAAGGATCTAGTTAA 243 818318 0.985040237 14 236 1911 0.966666667 2.115610512 0.22962963 0.090534979 0.181481481 243 8 1 261 2L:818272-818375 8 CG3876 FBtr0078039 818077 818506 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 818270 818376 3'utr CG3876 FlyBase G5208.1 CGAGGGATTCCGAGAGGAGACGATTCAGTATGACAGGATCTGATGCATACACACGCTTTTAGCTTTAGGCTCTAACACGATTTTACACCTAAAGGATCTAGTTAAAT 183 818318 0.894220167 17 178 1423 0.977198697 2.176091259 0.159609121 0.459016393 0.67752443 183 6 1 300 2L:818270-818376 8 170.5 474 FBgn0031284 55.33333333 4.87 7.336666667 3.081325301 35.01026694 23.23943662 1 1 1 0.25 dme-miR-2a-2-5p 6mer3-8 TGATGA 2L 8189487 8189492 + 2L_8189487_8189492_+ 0.387338067 0.823828773 0.60558342 0.308645534 Piezo FBtr0335176|FBtr0335178|FBtr0335182|FBtr0335183|FBtr0335175|FBtr0335177|FBtr0335180|FBtr0335179|FBtr0335181 8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128 8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137 2L + 8189483 8189518 3'utr Piezo FlyBase G2997.1 ATAATGATGAAAACTCATATTCAGGGAATTTAGCAT 8 8189502 0.727504568 2 5 50 0.75 0.954242509 0.083333333 0.5 0.666666667 8 3 0 9 2L:8189483-8189518 6 Piezo FBtr0335181|FBtr0335179|FBtr0335180|FBtr0335177|FBtr0335175|FBtr0335183|FBtr0335182|FBtr0335178|FBtr0335176 8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128|8189128 8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137|8190137 TGATGA 6mer3-8 dme-miR-2a-2-5p 2L + 8189479 8189516 3'utr Piezo FlyBase G2368.1 AATAATAATGATGAAAACTCATATTCAGGGAATTTAGC 7 8189489 0.825528972 3 6 43 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 2L:8189479-8189516 6 6 475 FBgn0264953 3209.976667 41.34 63.05333333 0.001869172 0.145137881 0.095157539 -15 -2 -8.5 0.25 dme-bantam-3p 6mer3-8 TGATCT 2L 8192604 8192609 - 2L_8192604_8192609_- 0.80577687 0.800225478 0.803001174 0.003925433 CG8475 FBtr0079639 8190952 8194921 2L - 8192578 8192638 5'utr CG8475 FlyBase G8910.1 ATCGAGCATCTTGACTTTATGAACCAAAGTGATCTGACCGACAACGAGAATGCGTTCTCGC 37 8192605 0.786975908 7 36 140 0.977777778 1.643452676 0.111111111 0.189189189 0.333333333 37 1 0 44 2L:8192578-8192638 6 CG8475 FBtr0079639 8190952 8194921 TGATCT 6mer3-8 dme-bantam-3p 2L - 8192590 8192627 5'utr CG8475 FlyBase G6907.1 TGACTTTATGAACCAAAGTGATCTGACCGACAACGAGA 25 8192606 0.922985833 4 23 82 1 1.62324929 0.023809524 0.4 0.642857143 25 0 0 42 2L:8192590-8192627 6 28 476 FBgn0031995 561.1466667 16.95666667 25.92 0.049897828 1.651267938 1.080246914 -4 -3 -3.5 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 2L 8200319 8200325 + 2L_8200319_8200325_+ 0.51487487 0.498509507 0.506692189 0.011572085 PGAP5 FBtr0079587 8200280 8200652 2L + 8200304 8200394 3'utr PGAP5 FlyBase G3007.1 AGGCATATCCTCTTTTGTGATTTACGCCTGATTGGGGCTTAGTTTAGACTAGATACGCCAGATTCCAGACTCAGATCCCAGATCCAGATCC 77 8200325 0.77869604 14 72 714 0.934782609 1.633468456 0.336956522 0.142857143 0.282608696 77 5 1 86 2L:8200304-8200394 7 PGAP5 FBtr0079587 8200280 8200652 TGTGATT 7mer-m1 dme-miR-308-3p 2L + 8200303 8200358 3'utr PGAP5 FlyBase G2375.1 AAGGCATATCCTCTTTTGTGATTTACGCCTGATTGGGGCTTAGTTTAGACTAGATA 53 8200325 0.712634575 12 50 479 0.942028986 1.335792102 0.434782609 0.264150943 0.434782609 53 2 2 65 2L:8200303-8200358 7 52.5 477 FBgn0031997 251.1233333 19.52 29.58 0.209060621 2.68954918 1.77484787 -6 -6 -6 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 8200491 8200498 - 2L_8200491_8200498_- 0.625768185 0.621324118 0.623546152 0.003142453 SLC5A11 FBtr0079637|FBtr0079637|FBtr0079637 8200463|8200463|8200463 8200884|8200884|8200884 2L - 8200474 8200605 3'utr SLC5A11 FlyBase G8915.1 CTTTACTTTCCAGCCTTTGTTCAAGCATTATTTTTTTGGCATTTTCGATTTGTAGTCAGCAGACTGTGTCTCATTATGTATTCCGTTTGACTTTACAAGCATAATGTCTGTGATAAATTCAATAAATAGATC 96 8200500 0.985436533 17 87 760 0.923728814 1.736396502 0.110169492 0.1875 0.338983051 96 8 1 109 2L:8200474-8200605 8 SLC5A11 FBtr0079637|FBtr0079637|FBtr0079637 8200463|8200463|8200463 8200884|8200884|8200884 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 8200482 8200518 3'utr SLC5A11 FlyBase G6910.1 TGACTTTACAAGCATAATGTCTGTGATAAATTCAATA 45 8200500 0.711099359 8 39 342 0.884057971 1.785329835 0.057971014 0.333333333 0.565217391 45 8 0 61 2L:8200482-8200518 8 60 478 FBgn0031998 248.32 11.31333333 17.32 0.241623711 5.303476724 3.464203233 2 2 2 0.25 dme-miR-184-5p 6mer3-8 TGATAA 2L 8209669 8209674 - 2L_8209669_8209674_- 0.918051867 0.851071511 0.884561689 0.047362295 Su(var)205 FBtr0079636|FBtr0079635 8209624|8209624 8209834|8209834 2L - 8209625 8209707 3'utr Su(var)205 FlyBase G8917.1 TCCATAAATGTCCAGAGTCAGTGTCTGTATTTATGATAACCATTTTCAATAAATAAAAAAAACCTTTATTCTGCTGGAGCCTA 18 8209664 0.676731094 12 18 127 1 1.431363764 0.333333333 0.333333333 0.555555556 18 0 0 27 2L:8209625-8209707 6 Su(var)205 FBtr0079635|FBtr0079636 8209624|8209624 8209834|8209834 TGATAA 6mer3-8 dme-miR-184-5p 2L - 8209625 8209688 3'utr Su(var)205 FlyBase G6914.1 AGTGTCTGTATTTATGATAACCATTTTCAATAAATAAAAAAAACCTTTATTCTGCTGGAGCCTA 10 8209676 0.98210971 6 10 75 1 1.176091259 0 0.4 0.6 10 0 0 15 2L:8209625-8209688 6 7.5 479 FBgn0003607 3176.68 396.8566667 605.5133333 0.002360955 0.018898511 0.012386185 -10 2 -4 0.25 dme-miR-277-3p 7mer-m8 TGCATTT 2L 821129 821135 + 2L_821129_821135_+ 0.607184724 0.605067683 0.606126203 0.001496945 Clp FBtr0078011 820968 821209 2L + 821046 821190 3'utr Clp FlyBase G896.1 AGTCCAGAGGTCGTAGGTTCCCAACTTCCGCAGGCGAACGTTTCAATCATTCTGTGTTTAAAGTGTATGTTAAGAAACTCATTTGCATTTTTGAAAAAAGTCCCTAGAACTGCCAGTAGAACGTATTGTGTTATCAGCGAAATAA 54 821128 0.839590949 13 49 388 0.915254237 1.255272505 0.338983051 0.092592593 0.169491525 54 3 2 54 2L:821046-821190 7 Clp FBtr0078011 820968 821209 TGCATTT 7mer-m8 dme-miR-277-3p 2L + 821049 821185 3'utr Clp FlyBase G715.1 CCAGAGGTCGTAGGTTCCCAACTTCCGCAGGCGAACGTTTCAATCATTCTGTGTTTAAAGTGTATGTTAAGAAACTCATTTGCATTTTTGAAAAAAGTCCCTAGAACTGCCAGTAGAACGTATTGTGTTATCAGCGA 44 821128 0.987021857 8 41 359 0.920634921 1.462397998 0.349206349 0.318181818 0.523809524 44 4 1 58 2L:821049-821185 7 21 480 FBgn0015621 194.6666667 19.23666667 29.43666667 0.107876712 1.091665223 0.713395991 1 1 1 0.25 dme-miR-318-3p 6mer2-7 CCAGTG 2L 824367 824372 - 2L_824367_824372_- 0.756413419 0.998461636 0.877437527 0.171153924 CG3862 FBtr0078038 824327 824432 2L - 824353 824419 3'utr CG3862 FlyBase G6664.1 TTTTAGATTAGTTAACTTAAAGTATACTCTAGTCGAAAATACTATTGCCAGTGGCAGCCCAACCAAT 30 824393 0.978085751 9 25 174 0.80952381 0.753327667 0.047619048 0.2 0.428571429 30 3 5 34 2L:824353-824419 6 CG3862 FBtr0078038 824327 824432 CCAGTG 6mer2-7 dme-miR-318-3p 2L - 824355 824412 3'utr CG3862 FlyBase G5212.1 TTAGTTAACTTAAAGTATACTCTAGTCGAAAATACTATTGCCAGTGGCAGCCCAACCA 14 824375 0.978881592 8 11 79 0.826086957 0.977723605 0 0.5 0.695652174 14 3 1 19 2L:824355-824412 6 7.5 481 FBgn0031286 219 17.47666667 26.73666667 0.034246575 0.42914362 0.280513652 21 3 12 0.25 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2L 8259591 8259597 - 2L_8259591_8259597_- 0.778680301 0.805740535 0.792210418 0.019134451 Btk29A FBtr0330693|FBtr0330693|FBtr0330692|FBtr0330692|FBtr0079618|FBtr0079618|FBtr0079615|FBtr0079615|FBtr0112835|FBtr0112835|FBtr0112836|FBtr0112836|FBtr0079617|FBtr0079617 8259503|8259503|8259503|8259503|8258753|8258753|8259503|8259503|8259503|8259503|8258371|8258371|8259503|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537 2L - 8259578 8259607 3'utr Btk29A FlyBase G8997.1 ATGAACGTTTTACTTAATTAATTTTATCAT 9 8259599 0.818557822 2 9 112 1 1.041392685 0.636363636 0.222222222 0.363636364 9 0 0 11 2L:8259578-8259607 7 Btk29A FBtr0112836|FBtr0112836|FBtr0079617|FBtr0079617|FBtr0079615|FBtr0079615|FBtr0112835|FBtr0112835|FBtr0079618|FBtr0079618|FBtr0330693|FBtr0330693|FBtr0330692|FBtr0330692 8258371|8258371|8259503|8259503|8259503|8259503|8259503|8259503|8258753|8258753|8259503|8259503|8259503|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2L - 8259580 8259608 3'utr Btk29A FlyBase G6987.1 TATGAACGTTTTACTTAATTAATTTTATC 7 8259599 0.725815484 3 6 82 0.888888889 0.903089987 0.333333333 0.285714286 0.444444444 7 1 0 8 2L:8259580-8259608 7 8 482 FBgn0003502 699.44 22.40333333 34.31333333 0.011437722 0.357089719 0.233145522 2 2 2 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 2L 8259816 8259822 - 2L_8259816_8259822_- 0.487570291 0.500800521 0.494185406 0.009355164 Btk29A FBtr0330693|FBtr0330692|FBtr0079618|FBtr0079615|FBtr0112835|FBtr0112836|FBtr0079617 8259503|8259503|8258753|8259503|8259503|8258371|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537 2L - 8259790 8260037 3'utr Btk29A FlyBase G9000.1 GTGCTAAGTAAAATATGATTATCTCTAAAGAATGATAGAAACAAACAAACAAGAAAACTGATTATGCATTAAATATTAAATGTAAGCCTCAAGTCGAAAGCGAAATGTTTGCACAACTGATAAAGGATGAAGGAACCGAAGGATGATAAGAAAAGAGTTCGCCAAGAAACATAAACGATTTTTAGACTAGATTTGTACGTGCGTAGTTTAAGTTTTGTGATTTATTGTTTAATTCTTGCAGACGATTT 516 8259816 0.98641716 35 504 6584 0.968152866 1.938805539 0.643312102 0.158914729 0.308917197 516 14 6 608 2L:8259790-8260037 7 Btk29A FBtr0112836|FBtr0079617|FBtr0079615|FBtr0112835|FBtr0079618|FBtr0330693|FBtr0330692 8258371|8259503|8259503|8259503|8258753|8259503|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 8259778 8259865 3'utr Btk29A FlyBase G6988.1 AAACGATTTTTAGACTAGATTTGTACGTGCGTAGTTTAAGTTTTGTGATTTATTGTTTAATTCTTGCAGACGATTTTTATTTTTATTT 409 8259816 0.994162455 17 405 5327 0.988906498 2.318063335 0.703645008 0.393643032 0.606973059 409 5 2 624 2L:8259778-8259865 7 430.5 483 FBgn0003502 699.44 22.40333333 34.31333333 0.615492394 19.21589049 12.54614338 -6 -6 -6 0.25 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA 2L 8260458 8260465 - 2L_8260458_8260465_- 0.574542938 0.472396612 0.523469775 0.072228341 Btk29A FBtr0330693|FBtr0330692|FBtr0079616|FBtr0079618|FBtr0079615|FBtr0112835|FBtr0112836|FBtr0079617 8259503|8259503|8260069|8258753|8259503|8259503|8258371|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537 2L - 8260420 8260537 3'utr Btk29A FlyBase G9004.1 GGAGCGGACCAGATTGCGGCACCCATCGCCTGAAATTAACACGCACTGAACACACTGAAGCATCTTAAGATATTGAAGAACGTTAAAGGCATTACATTTAAGGTTACAAAAGCGGCGA 29 8260482 0.958395383 15 27 141 0.933333333 1.146128036 0.266666667 0.034482759 0.066666667 29 1 1 28 2L:8260420-8260537 8 Btk29A FBtr0112836|FBtr0079617|FBtr0079615|FBtr0112835|FBtr0079616|FBtr0079618|FBtr0330693|FBtr0330692 8258371|8259503|8259503|8259503|8260069|8258753|8259503|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p 2L - 8260431 8260539 stop_codon Btk29A FlyBase G6992.1 AAGGAGCGGACCAGATTGCGGCACCCATCGCCTGAAATTAACACGCACTGAACACACTGAAGCATCTTAAGATATTGAAGAACGTTAAAGGCATTACATTTAAGGTTAC 24 8260482 0.958808004 10 19 95 0.857142857 1.176091259 0.2 0.375 0.571428571 24 4 1 30 2L:8260431-8260539 8 9 484 FBgn0003502 699.44 22.40333333 34.31333333 0.012867437 0.401725934 0.262288712 17 17 17 0.25 dme-miR-276a-3p 7mer-A1 GTTCCTA 2L 8316765 8316771 + 2L_8316765_8316771_+ 0.755899183 0.762640985 0.759270084 0.004767172 CG7806 FBtr0079600 8316672 8317011 2L + 8316735 8316784 3'utr CG7806 FlyBase G3042.1 ATTACTTTGTTTAATTTTTATCATACTTGTGTTCCTAACTAACAATTCCA 80 8316761 0.775187002 6 79 830 0.979166667 1.496006599 0 0.175 0.3125 80 0 2 94 2L:8316735-8316784 7 CG7806 FBtr0079600 8316672 8317011 GTTCCTA 7mer-A1 dme-miR-276a-3p 2L + 8316736 8316782 3'utr CG7806 FlyBase G2399.1 TTACTTTGTTTAATTTTTATCATACTTGTGTTCCTAACTAACAATTC 54 8316761 0.947220572 5 52 531 0.972972973 1.857332496 0 0.277777778 0.472972973 54 2 0 72 2L:8316736-8316782 7 66.5 485 FBgn0032018 954.6066667 23.09666667 35.38666667 0.069662199 2.879203348 1.879238885 4 4 4 0.25 dme-miR-304-5p 8mer-A1 TGAGATTA 2L 8317181 8317188 - 2L_8317181_8317188_- 0.621868149 0.559092233 0.590480191 0.044389265 mtsh FBtr0301169 8316887 8317538 2L - 8317171 8317225 stop_codon mtsh FlyBase G9035.1 TTCAACTATGAAATCTAAGTGAAAAAGTATTGACGGTTGAGATTATCAACTGAAA 11 8317188 0.742529854 5 10 65 0.923076923 1.079181246 0 0.090909091 0.230769231 11 1 0 12 2L:8317171-8317225 8 mtsh FBtr0301169 8316887 8317538 TGAGATTA 8mer-A1 dme-miR-304-5p 2L - 8317171 8317264 stop_codon mtsh FlyBase G7016.1 CAGTTTGATCACATCATGGGCAGGCCAGGCGAAAAGCTCTTCAACTATGAAATCTAAGTGAAAAAGTATTGACGGTTGAGATTATCAACTGAAA 13 8317189 0.970752231 6 11 72 1 1.204119983 0.25 0.230769231 0.375 13 0 0 16 2L:8317171-8317264 8 5 486 FBgn0262598 6.67 0.32 0.476666667 0.749625187 15.625 10.48951049 0 1 0.5 0.25 dme-bantam-3p 7mer-m8 TGATCTC 2L 8317316 8317322 - 2L_8317316_8317322_- 0.570181497 0.584175092 0.577178294 0.009894969 mtsh FBtr0301169 8316887 8317538 2L - 8317293 8317351 3'utr mtsh FlyBase G9036.1 TACACGGACGAGAACCTCCTCTACTACATTGATCTCTACGAGCGCTCTGTGAACGACAT 298 8317323 0.965429051 10 291 2147 0.973760933 2.222716471 0.049562682 0.127516779 0.241982507 298 8 1 334 2L:8317293-8317351 7 mtsh FBtr0301169 8316887 8317538 TGATCTC 7mer-m8 dme-bantam-3p 2L - 8317290 8317349 3'utr mtsh FlyBase G7017.1 CACGGACGAGAACCTCCTCTACTACATTGATCTCTACGAGCGCTCTGTGAACGACATGCT 180 8317323 0.840018044 10 173 1259 0.962199313 2.447158031 0.06185567 0.405555556 0.632302405 180 11 0 280 2L:8317290-8317349 7 229.5 487 FBgn0262598 6.67 0.32 0.476666667 34.4077961 717.1875 481.4685315 1 1 1 0.25 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 832022 832028 + 2L_832022_832028_+ 0.649801723 0.645307439 0.647554581 0.00317795 dock FBtr0332973|FBtr0078013|FBtr0078014|FBtr0078015 831922|831922|831922|831922 832331|833241|833241|833241 2L + 831979 832091 3'utr dock FlyBase G911.1 AACACACATATGCAACACAAAGATATACCAAGGCTAACTTGTAGGCAGCTCAGCTCAGCGCGACGTGTAGTTCAATATAGTTCGGTTTGGATATTTAATTATGGACTCAGTTT 38 832019 0.850271694 9 37 216 0.975609756 1.602059991 0.268292683 0.078947368 0.146341463 38 1 0 40 2L:831979-832091 7 dock FBtr0332973|FBtr0078013|FBtr0078014|FBtr0078015 831922|831922|831922|831922 832331|833241|833241|833241 GGCAGCT 7mer-m8 dme-miR-980-3p 2L + 831974 832042 3'utr dock FlyBase G727.1 TCAACAACACACATATGCAACACAAAGATATACCAAGGCTAACTTGTAGGCAGCTCAGCTCAGCGCGAC 13 832019 0.958801057 5 13 62 1 1.301029996 0.2 0.538461538 0.7 13 0 0 20 2L:831974-832042 7 17 488 FBgn0010583 684.1466667 22.6 34.75 0.024848473 0.752212389 0.489208633 3 3 3 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 8322382 8322387 - 2L_8322382_8322387_- 0.927429461 0.514850235 0.721139848 0.291737621 CG7781 FBtr0079609|FBtr0079609|FBtr0079609|FBtr0346462|FBtr0346462|FBtr0346462 8321278|8321278|8321278|8321278|8321278|8321278 8322487|8322487|8322487|8322487|8322487|8322487 2L - 8322355 8322453 5'utr CG7781 FlyBase G9045.1 TTGTTTGTTTTATCGATGCATCCACCCAGTTTTTCTTTCGTATTGCTGCTGCTGACTCTTTGACTTCTGTGACACTTTCACCGCTTTCTCCCGCCCCCC 40 8322389 0.81242058 13 38 386 0.958333333 1.361727836 0.270833333 0.15 0.291666667 40 1 1 46 2L:8322355-8322453 6 CG7781 FBtr0079609|FBtr0079609|FBtr0079609|FBtr0346462|FBtr0346462|FBtr0346462 8321278|8321278|8321278|8321278|8321278|8321278 8322487|8322487|8322487|8322487|8322487|8322487 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 8322353 8322451 5'utr CG7781 FlyBase G7021.1 GTTTGTTTTATCGATGCATCCACCCAGTTTTTCTTTCGTATTGCTGCTGCTGACTCTTTGACTTCTGTGACACTTTCACCGCTTTCTCCCGCCCCCCTT 31 8322393 0.989837963 15 27 268 0.860465116 1.568201724 0.162790698 0.35483871 0.534883721 31 6 0 37 2L:8322353-8322451 6 16 489 FBgn0032021 62 3.843333333 5.696666667 0.258064516 4.163052905 2.808660035 2 6 4 0.25 dme-miR-980-5p 7mer-A1 AAAAACA 2L 833599 833605 - 2L_833599_833605_- 0.764342255 0.780919471 0.772630863 0.011721851 drongo FBtr0302121|FBtr0302612|FBtr0078037|FBtr0302120 833582|833582|833585|833582 834544|834544|834544|834544 2L - 833595 833656 3'utr drongo FlyBase G6668.1 TGTCAAACATTATCGAAGCCTTAAAGTTATTTAAAACTACGAAATTTCAATAAAAACAAATA 14 833635 0.736506047 9 14 91 1 1.278753601 0.210526316 0.214285714 0.421052632 14 0 0 19 2L:833595-833656 7 drongo FBtr0078037|FBtr0302120|FBtr0302121|FBtr0302612 833585|833582|833582|833582 834544|834544|834544|834544 AAAAACA 7mer-A1 dme-miR-980-5p 2L - 833600 833657 3'utr drongo FlyBase G5214.1 GTGTCAAACATTATCGAAGCCTTAAAGTTATTTAAAACTACGAAATTTCAATAAAAAC 14 833612 0.75494106 8 14 85 1 1.447158031 0.178571429 0.642857143 0.821428571 14 0 0 28 2L:833600-833657 5 4 490 FBgn0020304 1071.886667 39.91333333 61.24666667 0.003731738 0.100217137 0.065309677 30 7 18.5 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 833930 833935 - 2L_833930_833935_- 0.742676634 0.818908615 0.780792625 0.053904164 drongo FBtr0302121|FBtr0302612|FBtr0078037|FBtr0302120 833582|833582|833585|833582 834544|834544|834544|834544 2L - 833876 833976 3'utr drongo FlyBase G6671.1 AGACACAGTTAGTACAGATACAGATATACATATACGCTTTTGTACCTAATGAATTGCTTCTTGTTTCCATTGCTAATCATCTGCTTTTCGTGTGCTAATTT 430 833936 0.68117376 18 422 3683 0.980988593 2.411619706 0.053231939 0.181395349 0.330798479 430 9 1 516 2L:833876-833976 6 drongo FBtr0078037|FBtr0302120|FBtr0302121|FBtr0302612 833585|833582|833582|833582 834544|834544|834544|834544 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L - 833910 834018 3'utr drongo FlyBase G5217.1 TATAACGTACGACTATACATATACGGATACAGATACAGATTCAGACACAGTTAGTACAGATACAGATATACATATACGCTTTTGTACCTAATGAATTGCTTCTTGTTTC 293 833936 0.852298231 18 281 2332 0.972157773 2.145092768 0.053364269 0.348122867 0.556844548 293 10 2 419 2L:833910-834018 6 342 491 FBgn0020304 1071.886667 39.91333333 61.24666667 0.319063583 8.568565225 5.583977359 1 1 1 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 2L 8388308 8388314 + 2L_8388308_8388314_+ 0.505188721 0.497350911 0.501269816 0.005542162 CG13384 FBtr0303469|FBtr0303468|FBtr0079655|FBtr0303470|FBtr0303467|FBtr0079658|FBtr0079653|FBtr0079657|FBtr0079654|FBtr0079656|FBtr0303471 8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134 8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804 2L + 8388119 8388333 stop_codon CG13384 FlyBase G3111.1 ACGACAGAACCCACTGAGTTTAATCGAAATAAGCGAATCGAAAACAGAACCTGGCTAGTTCTGCCTACAAATGTGTGCGAATTTATGACGAAGGCTTTATGTAGTTACACTCAGACTACGAATATGTTTACCATTAGTTGTTTACCATTTCCCAACTGGTATCGGTCCAGTCCAGTGGCGGTGCTTTAGTGTGATTAATTTATATTTATGGCAAA 396 8388304 0.959942088 39 386 2771 0.977505112 2.202306642 0.355828221 0.191919192 0.345603272 396 9 2 478 2L:8388119-8388333 7 CG13384 FBtr0303467|FBtr0079655|FBtr0303468|FBtr0303469|FBtr0303471|FBtr0303470|FBtr0079656|FBtr0079657|FBtr0079654|FBtr0079658|FBtr0079653 8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134|8388134 8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804|8388804 TGTGATT 7mer-m1 dme-miR-308-3p 2L + 8388267 8388329 3'utr CG13384 FlyBase G2454.2 TTCCCAACTGGTATCGGTCCAGTCCAGTGGCGGTGCTTTAGTGTGATTAATTTATATTTATGG 257 8388304 0.681702752 15 249 1796 0.97721519 2.10946605 0.432911392 0.373540856 0.592405063 257 7 2 386 2L:8388267-8388329 7 158 492 FBgn0032036 4208.186667 203.2133333 311 0.037545863 0.777508038 0.508038585 4 4 4 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 8412226 8412233 - 2L_8412226_8412233_- 0.401684455 0.407521799 0.404603127 0.004127594 CG13398 FBtr0331990 8412142 8413550 2L - 8412158 8412255 3'utr CG13398 FlyBase G9111.1 ATGAATGTTCTTTCGTTTACATGTACTTAAAATCGCTGCTTAGTCGGCGGCATAAACTAAATTATTGTTAGTGTCTAAGACGAAATACGTGCAATAAA 207 8412234 0.989014861 8 201 1909 0.963855422 2.380211242 0.297188755 0.164251208 0.305220884 207 9 0 240 2L:8412158-8412255 8 CG13398 FBtr0331990 8412142 8413550 GTACTTAA 8mer-A1 dme-miR-252-5p 2L - 8412202 8412255 3'utr CG13398 FlyBase G7070.1 ATGAATGTTCTTTCGTTTACATGTACTTAAAATCGCTGCTTAGTCGGCGGCATA 164 8412234 0.813761594 5 149 1436 0.920704846 1.718086295 0.268722467 0.298780488 0.49339207 164 15 3 209 2L:8412202-8412255 8 183.5 493 FBgn0032042 445.3533333 18.47333333 28.30333333 0.412032394 9.933237099 6.483335296 1 1 1 0.25 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 8412354 8412360 - 2L_8412354_8412360_- 0.817042829 0.818326184 0.817684507 0.000907501 CG13398 FBtr0331990 8412142 8413550 2L - 8412341 8412400 3'utr CG13398 FlyBase G9113.1 AAAAAAAAACAATGGTAGAAAGCATCGCGTTGCATTGTCCGCTGTGAGTTTATAATTTTT 35 8412365 0.98317773 8 31 285 0.909090909 1.602059991 0.295454545 0.257142857 0.409090909 35 4 0 40 2L:8412341-8412400 7 CG13398 FBtr0331990 8412142 8413550 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L - 8412281 8412383 3'utr CG13398 FlyBase G7071.1 GAAAGCATCGCGTTGCATTGTCCGCTGTGAGTTTATAATTTTTTACATATATATATCGCTGAATTGTTATTCAATTTGTTAGGAGTTATATACACTGAGCATT 23 8412365 0.979078631 11 21 203 0.864864865 1.505149978 0.27027027 0.434782609 0.648648649 23 5 0 32 2L:8412281-8412383 7 22.5 494 FBgn0032042 445.3533333 18.47333333 28.30333333 0.050521683 1.217971851 0.794959369 5 5 5 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2L 8412803 8412809 - 2L_8412803_8412809_- 0.787368906 0.699333015 0.743350961 0.062250782 CG13398 FBtr0079710|FBtr0331990 8412409|8412142 8413550|8413550 2L - 8412799 8412860 3'utr CG13398 FlyBase G9116.1 CGAATTTACTGCACGAGATTGTGGTAAAGTGAAATTTGAAGAGTGATTTGTCCAAAGATATG 13 8412812 0.988896323 5 10 88 0.846153846 0.740362689 0.615384615 0.083333333 0.153846154 12 1 1 11 2L:8412799-8412860 7 CG13398 FBtr0331990|FBtr0079710 8412142|8412409 8413550|8413550 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 8412799 8412859 3'utr CG13398 FlyBase G7073.1 GAATTTACTGCACGAGATTGTGGTAAAGTGAAATTTGAAGAGTGATTTGTCCAAAGATATG 13 8412813 0.864836602 5 12 83 1 1.380211242 0.333333333 0.461538462 0.708333333 13 0 0 24 2L:8412799-8412859 7 8 495 FBgn0032042 445.3533333 18.47333333 28.30333333 0.017963265 0.433056658 0.28265222 3 4 3.5 0.25 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 8449759 8449766 - 2L_8449759_8449766_- 0.617877634 0.615682728 0.616780181 0.001552029 fu12 FBtr0079703|FBtr0302160|FBtr0079704|FBtr0340242 8449689|8449689|8449689|8449689 8450088|8450088|8450088|8450088 2L - 8449702 8449787 3'utr fu12 FlyBase G9139.1 TAAGCGCATTTGTTGGATGTTTAGCTTTATGCAAATATTGTATTGATTTATATGTGAATAATGAAATGAGACCTATTTAATAAAAC 60 8449767 0.79673289 15 59 543 0.977272727 1.934498451 0.136363636 0.3 0.522727273 60 2 0 86 2L:8449702-8449787 8 fu12 FBtr0079703|FBtr0302160|FBtr0079704|FBtr0340242 8449689|8449689|8449689|8449689 8450088|8450088|8450088|8450088 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 8449689 8449786 3'utr fu12 FlyBase G7086.1 AAGCGCATTTGTTGGATGTTTAGCTTTATGCAAATATTGTATTGATTTATATGTGAATAATGAAATGAGACCTATTTAATAAAACATTTTGCACTGAA 46 8449767 0.98977421 11 45 441 0.986842105 1.875061263 0.25 0.434782609 0.657894737 46 1 0 75 2L:8449689-8449786 8 40.5 496 FBgn0026718 82 6.056666667 9.28 0.493902439 6.68684645 4.364224138 1 1 1 0.25 dme-miR-184-3p 7mer-m8 TCCGTCC 2L 8490388 8490394 + 2L_8490388_8490394_+ 0.661364629 0.661614203 0.661489416 0.000176494 CG13088 FBtr0079681 8490347 8490546 2L + 8490368 8490403 3'utr CG13088 FlyBase G3203.1 AAATGACATTTCTACCTCAATCCGTCCGGTATACGA 16 8490388 0.724762169 4 14 112 0.894736842 1.230448921 0 0.1875 0.315789474 16 2 0 17 2L:8490368-8490403 7 CG13088 FBtr0079681 8490347 8490546 TCCGTCC 7mer-m8 dme-miR-184-3p 2L + 8490367 8490400 3'utr CG13088 FlyBase G2532.1 TAAATGACATTTCTACCTCAATCCGTCCGGTATA 22 8490397 0.699608806 5 19 149 0.875 1.322219295 0 0.090909091 0.166666667 22 3 0 21 2L:8490367-8490400 7 19 497 FBgn0032047 48.33333333 4.033333333 6.113333333 0.393103448 4.710743802 3.107960742 0 -9 -4.5 0.25 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2L 8525625 8525630 - 2L_8525625_8525630_- 0.941006706 0.877898421 0.909452563 0.044624307 lmgB FBtr0333420|FBtr0112744 8524997|8525551 8526861|8526861 2L - 8525604 8525647 3'utr lmgB FlyBase G9171.1 AAATCCACACGATCATATTTGACTGTTCTTTATTTCGTTATCAT 13 8525629 0.951911594 5 13 139 1 1.255272505 0.111111111 0.384615385 0.555555556 13 0 0 18 2L:8525604-8525647 6 lmgB FBtr0333420|FBtr0112744 8524997|8525551 8526861|8526861 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2L - 8525617 8525639 3'utr lmgB FlyBase G7107.1 ACGATCATATTTGACTGTTCTTT 9 8525628 0.73741131 3 8 86 0.916666667 0.740362689 0.583333333 0.222222222 0.416666667 9 0 1 11 2L:8525617-8525639 6 11 498 FBgn0085470 298.48 19.26 29.45666667 0.036853391 0.57113188 0.373429897 -1 -2 -1.5 0.25 dme-miR-263a-5p 6mer3-8 GTGCCA 2L 8537640 8537645 + 2L_8537640_8537645_+ 0.752248924 0.663129888 0.707689406 0.063016649 CG17834 FBtr0079689|FBtr0079688|FBtr0333418 8537596|8537596|8537596 8537932|8537932|8537932 2L + 8537619 8537662 3'utr CG17834 FlyBase G3213.1 CAATGGGTACTAGCAGTATTTGTGCCAAAGATTGAGGAACTCTC 12 8537639 0.689971482 4 12 77 1 1.146128036 0.5 0.083333333 0.214285714 12 0 0 14 2L:8537619-8537662 6 CG17834 FBtr0333418|FBtr0079688|FBtr0079689 8537596|8537596|8537596 8537932|8537932|8537932 GTGCCA 6mer3-8 dme-miR-263a-5p 2L + 8537620 8537661 3'utr CG17834 FlyBase G2538.1 AATGGGTACTAGCAGTATTTGTGCCAAAGATTGAGGAACTCT 7 8537639 0.98098198 3 7 51 1 1.146128036 0.5 0.428571429 0.714285714 7 0 0 14 2L:8537620-8537661 6 9.5 499 FBgn0028394 84 8.063333333 12.40666667 0.113095238 1.178172799 0.765717356 1 1 1 0.25 dme-miR-14-3p 6mer2-7 AGACTG 2L 8668152 8668157 + 2L_8668152_8668157_+ 0.999722489 0.970923573 0.985323031 0.020363897 Sema-1a FBtr0303878|FBtr0303879|FBtr0329931|FBtr0303877|FBtr0329932 8666210|8664168|8664168|8666210|8666034 8672041|8670014|8671917|8671917|8670014 2L + 8668134 8668174 3'utr Sema-1a FlyBase G3219.1 ACATAGGGTTTGTATTATAGACTGGACGAACGGAGGGCAGA 9 8668149 0.992450258 3 4 49 0.454545455 0.698970004 0.454545455 0.111111111 0.272727273 9 6 0 5 2L:8668134-8668174 6 Sema-1a FBtr0303877|FBtr0329931|FBtr0303879|FBtr0303878|FBtr0329932 8666210|8664168|8664168|8666210|8666034 8671917|8671917|8670014|8672041|8670014 AGACTG 6mer2-7 dme-miR-14-3p 2L + 8668138 8668162 3'utr Sema-1a FlyBase G2545.1 AGGGTTTGTATTATAGACTGGACGA 5 8668149 0.729059413 2 4 32 0.857142857 0.77815125 0 0.2 0.428571429 5 1 0 6 2L:8668138-8668162 6 5.5 500 FBgn0011259 295.3333333 4.256666667 6.55 0.018623025 1.292090838 0.839694656 3 3 3 0.25 dme-miR-12-5p 7mer-A1 ATACTCA 2L 8668261 8668267 + 2L_8668261_8668267_+ 0.809120454 0.813548804 0.811334629 0.003131281 Sema-1a FBtr0303878|FBtr0303879|FBtr0329931|FBtr0303877|FBtr0329932 8666210|8664168|8664168|8666210|8666034 8672041|8670014|8671917|8671917|8670014 2L + 8668202 8668285 3'utr Sema-1a FlyBase G3220.1 GGGGCATTGCTAATGTTGTTCTCATATTAAAGTATATTAGAAATAGGATAAGCTAATTGATACTCAATATTTTGTATGAGAAAC 22 8668259 0.990017337 5 21 208 0.96 1.380211242 0.12 0.090909091 0.2 22 1 0 24 2L:8668202-8668285 7 Sema-1a FBtr0303877|FBtr0329931|FBtr0303879|FBtr0303878|FBtr0329932 8666210|8664168|8664168|8666210|8666034 8671917|8671917|8670014|8672041|8670014 ATACTCA 7mer-A1 dme-miR-12-5p 2L + 8668202 8668282 3'utr Sema-1a FlyBase G2546.1 GGGGCATTGCTAATGTTGTTCTCATATTAAAGTATATTAGAAATAGGATAAGCTAATTGATACTCAATATTTTGTATGAGA 15 8668259 0.987158117 5 14 122 0.952380952 1.301029996 0.142857143 0.333333333 0.523809524 15 1 0 20 2L:8668202-8668282 7 16 501 FBgn0011259 295.3333333 4.256666667 6.55 0.054176072 3.75880971 2.442748092 2 2 2 0.25 dme-miR-307a-3p 6mer3-8 GGTTGT 2L 8685274 8685279 - 2L_8685274_8685279_- 0.997837415 0.999938968 0.998888192 0.001486056 PrBP FBtr0079750 8684821 8685347 2L - 8685151 8685320 3'utr PrBP FlyBase G9186.1 TGATCGACCAGGTGTTCTCGCGTCCACCCACAAGTTTTTTTGGTTGTTCTTCAAGATGTTCTCTACAAAACATGCATACTTCGCTTTTGAGTACTTCAGCATTTCAATGCAATTGTTTGCGCGTTTATGAACTAGTTGTAGTCCAATGCATTTTAATCTAATCTAATTTT 52 8685263 0.977960038 23 51 475 0.983606557 1.77815125 0.262295082 0.173076923 0.295081967 52 1 0 60 2L:8685151-8685320 6 PrBP FBtr0079750 8684821 8685347 GGTTGT 6mer3-8 dme-miR-307a-3p 2L - 8685163 8685289 3'utr PrBP FlyBase G7120.1 AAGTTTTTTTGGTTGTTCTTCAAGATGTTCTCTACAAAACATGCATACTTCGCTTTTGAGTACTTCAGCATTTCAATGCAATTGTTTGCGCGTTTATGAACTAGTTGTAGTCCAATGCATTTTAATC 36 8685280 0.812420349 14 34 338 0.96 1.681241237 0.14 0.305555556 0.5 36 2 0 48 2L:8685163-8685289 6 17 502 FBgn0032059 209.34 22.80333333 34.73333333 0.081207605 0.745505043 0.489443378 -16 1 -7.5 0.25 dme-miR-276a-3p 6mer3-8 AGTTCC 2L 8710413 8710418 - 2L_8710413_8710418_- 0.970985986 0.984341518 0.977663752 0.009443765 raw FBtr0340231|FBtr0303868|FBtr0079746|FBtr0340232|FBtr0079745 8709878|8709878|8709878|8709878|8709878 8710434|8710434|8710434|8710434|8710434 2L - 8710398 8710458 stop_codon raw FlyBase G9211.1 TACAACAACCGCGACCGCTGCTAAATCGTACCTGTATTTAAGTTCCAGCACGTGACAATTT 70 8710423 0.985328005 10 65 537 0.933333333 1.84509804 0.293333333 0.057142857 0.12 70 5 0 70 2L:8710398-8710458 6 raw FBtr0340232|FBtr0079745|FBtr0303868|FBtr0079746|FBtr0340231 8709878|8709878|8709878|8709878|8709878 8710434|8710434|8710434|8710434|8710434 AGTTCC 6mer3-8 dme-miR-276a-3p 2L - 8710394 8710457 stop_codon raw FlyBase G7144.1 ACAACAACCGCGACCGCTGCTAAATCGTACCTGTATTTAAGTTCCAGCACGTGACAATTTAAGC 41 8710422 0.986824969 9 37 318 0.815384615 1.72427587 0.153846154 0.390243902 0.615384615 41 12 0 53 2L:8710394-8710457 6 8.5 503 FBgn0003209 722.0533333 20.74666667 31.84333333 0.011771984 0.40970437 0.266931854 5 4 4.5 0.25 dme-miR-14-3p 7mer-m8 AAGACTG 2L 876828 876834 + 2L_876828_876834_+ 0.670353175 0.670321821 0.670337498 2.22E-05 PNUTS FBtr0091489|FBtr0332000 876736|876736 877038|877038 2L + 876801 876854 3'utr PNUTS FlyBase G935.3 AGATTTCCGAAATCGAGTCCCCACATGAAGACTGTATCCAGGTTAGCCGCCGCA 328 876826 0.890271768 7 319 1537 0.9765625 2.096910013 0.111979167 0.131097561 0.2578125 328 7 2 375 2L:876801-876854 7 PNUTS FBtr0332000|FBtr0091489 876736|876736 877038|877038 AAGACTG 7mer-m8 dme-miR-14-3p 2L + 876736 876876 stop_codon PNUTS FlyBase G753.1 AGGACCTACCCGAATCTTCTGCGGAAGATTCAGCTGCATAGATCTCAGACGCGCAACGGAGGCCAAGATTTCCGAAATCGAGTCCCCACATGAAGACTGTATCCAGGTTAGCCGCCGCAAGTTAATCTAAGTGTATATATG 197 876826 0.960188933 16 181 895 0.932659933 1.965358514 0.131313131 0.355329949 0.572390572 197 18 2 277 2L:876736-876876 7 247.5 504 FBgn0053526 1548.73 47.96666667 73.53 0.159808359 5.159833218 3.365973072 2 2 2 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 8829076 8829082 + 2L_8829076_8829082_+ 0.796330775 0.796058501 0.796194638 0.000192545 SoxN FBtr0330210|FBtr0330210|FBtr0330210|FBtr0079733|FBtr0079733|FBtr0079733 8828778|8828778|8828778|8828211|8828211|8828211 8829670|8829670|8829670|8829670|8829670|8829670 2L + 8828888 8829143 3'utr SoxN FlyBase G3269.1 TCGAATTTCGAAGTGGCAGAGTAACACATGCGCATATAAATAAATGAGAATAGGATTAATGTTTAGTCATTTAAATGATGCATACGCACTGTTGTACCACAATAGTAAGATGACAACTCACTTGCATTCCATACCGTTCTGCTTCGATTTCCCTTGATTTCCCGCTTGTTGCATAGCTAAAACAATTGTGTGATACAAATAAACTGTTGCCAATTACGGGGACAACGGCAACAACAACAAATTCGTTTGGTTTAGC 161 8829074 0.974663391 25 153 954 0.954773869 1.579783597 0.070351759 0.180124224 0.336683417 161 5 4 190 2L:8828888-8829143 7 SoxN FBtr0330210|FBtr0330210|FBtr0330210|FBtr0079733|FBtr0079733|FBtr0079733 8828778|8828778|8828778|8828211|8828211|8828211 8829670|8829670|8829670|8829670|8829670|8829670 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 8829032 8829122 3'utr SoxN FlyBase G2583.3 CGATTTCCCTTGATTTCCCGCTTGTTGCATAGCTAAAACAATTGTGTGATACAAATAAACTGTTGCCAATTACGGGGACAACGGCAACAAC 68 8829074 0.969964895 8 64 382 0.969072165 1.973127854 0.020618557 0.323529412 0.525773196 68 3 0 94 2L:8829032-8829122 7 84.5 505 FBgn0029123 4.333333333 0.126666667 0.19 19.5 667.1052632 444.7368421 2 2 2 0.25 dme-miR-970-3p 7mer-m8 TCTTATG 2L 8829333 8829339 + 2L_8829333_8829339_+ 0.613944114 0.624066236 0.619005175 0.007157406 SoxN FBtr0330210|FBtr0079733 8828778|8828211 8829670|8829670 2L + 8829221 8829355 3'utr SoxN FlyBase G3271.1 GACGCGGAATCAAGCACAAGTTTAGTAGGAGTAAAGGCAGTTGTGGCGAGGCGATGAAAATATTTCAGAAAAGCAAAGAAAAATGTCAAAAAACATTCTATTTTATAAATTCTCTTATGCATTAAGTAATTATAA 42 8829335 0.990102542 11 40 382 0.943396226 1.698970004 0.245283019 0.238095238 0.396226415 42 3 0 50 2L:8829221-8829355 7 SoxN FBtr0330210|FBtr0079733 8828778|8828211 8829670|8829670 TCTTATG 7mer-m8 dme-miR-970-3p 2L + 8829315 8829349 3'utr SoxN FlyBase G2585.1 ATTCTATTTTATAAATTCTCTTATGCATTAAGTAA 24 8829335 0.757241616 3 24 249 1 1.544068044 0.314285714 0.333333333 0.542857143 24 0 0 35 2L:8829315-8829349 7 28 506 FBgn0029123 4.333333333 0.126666667 0.19 6.461538462 221.0526316 147.3684211 -2 -2 -2 0.25 dme-bantam-3p 6mer3-8 TGATCT 2L 8953627 8953632 - 2L_8953627_8953632_- 0.823144705 0.836411729 0.829778217 0.009381186 CG31886 FBtr0079787|FBtr0113029|FBtr0303885 8953479|8953479|8953479 8954021|8954021|8954021 2L - 8953513 8953806 3'utr CG31886 FlyBase G9261.1 GAATGTAGCCTAAGACGCAAGCATTTTTTGGTCTACAAATGAAAATGGGAAAATAGTAAGATAAAATATGTAAATTGTATATCGTGTACAAATAAATGTAGATACCAAGTAATTTTAAGATGAAATTGTAGTACTTATCAATTAATTCAATTATTCTCATTTTATAAACGACTTTGATCTTTTTGTTTACCTGAACACATTTTAAAGACAATTCTTATGTAGTCATTTGAAGAGGATTAGTTTTAATGCTTTTGTTGACTTTGTATAAGTGATTTGAATTTTAAGGAAATTTTC 969 8953624 0.831691 75 931 9074 0.963288109 1.905616011 0.106145251 0.226006192 0.401436552 969 32 14 1207 2L:8953513-8953806 6 CG31886 FBtr0303885|FBtr0113029|FBtr0079787 8953479|8953479|8953479 8954021|8954021|8954021 TGATCT 6mer3-8 dme-bantam-3p 2L - 8953513 8953805 3'utr CG31886 FlyBase G7179.1 AATGTAGCCTAAGACGCAAGCATTTTTTGGTCTACAAATGAAAATGGGAAAATAGTAAGATAAAATATGTAAATTGTATATCGTGTACAAATAAATGTAGATACCAAGTAATTTTAAGATGAAATTGTAGTACTTATCAATTAATTCAATTATTCTCATTTTATAAACGACTTTGATCTTTTTGTTTACCTGAACACATTTTAAAGACAATTCTTATGTAGTCATTTGAAGAGGATTAGTTTTAATGCTTTTGTTGACTTTGTATAAGTGATTTGAATTTTAAGGAAATTTTC 741 8953623 0.817424036 78 711 7034 0.960637301 1.96933118 0.11715089 0.326585695 0.532333646 741 32 10 1025 2L:8953513-8953805 6 526 507 FBgn0032079 1123.893333 53.47 82.11333333 0.468015945 9.837291939 6.405780628 -8 -9 -8.5 0.25 dme-miR-305-5p 7mer-A1 GTACAAA 2L 8970040 8970046 + 2L_8970040_8970046_+ 0.671187003 0.603203637 0.63719532 0.048071523 CG18088 FBtr0332187|FBtr0079759 8970025|8970025 8970627|8970259 2L + 8970028 8970072 3'utr CG18088 FlyBase G3294.1 TAAGTCTCTTATGTACAAAATAAAGTTTAAGTTTAGTTTAAAACT 48 8970038 0.679852743 7 43 378 0.893939394 1.16879202 0.045454545 0.3125 0.5 48 4 3 59 2L:8970028-8970072 7 CG18088 FBtr0079759|FBtr0332187 8970025|8970025 8970259|8970627 GTACAAA 7mer-A1 dme-miR-305-5p 2L + 8970029 8970060 3'utr CG18088 FlyBase G2604.1 AAGTCTCTTATGTACAAAATAAAGTTTAAGTT 14 8970037 0.657229584 3 12 100 0.857142857 0.77815125 0.19047619 0.428571429 0.619047619 14 1 2 18 2L:8970029-8970060 7 30.5 508 FBgn0032082 216 12.59666667 19.19 0.141203704 2.42127547 1.589369463 2 3 2.5 0.25 dme-miR-31a-5p 6mer3-8 TCTTGC 2L 9245858 9245863 + 2L_9245858_9245863_+ 0.817933511 0.833851575 0.825892543 0.011255796 tai FBtr0333405|FBtr0303872|FBtr0303871|FBtr0303873|FBtr0304974|FBtr0303870 9245807|9245807|9245807|9245807|9245807|9245807 9247186|9247186|9247186|9250211|9250211|9247186 2L + 9245819 9245897 3'utr tai FlyBase G3332.1 CCTAGTTCAGAACCAAGGATCACGTACAACCAAAACTTCTCTTGCGCACGCATTTATGGCTCTAGATACGAAAAACAAT 26 9245874 0.975721882 12 25 157 0.96969697 1.204119983 0.060606061 0.115384615 0.303030303 26 0 1 32 2L:9245819-9245897 6 tai FBtr0304974|FBtr0303870|FBtr0303871|FBtr0303873|FBtr0333405|FBtr0303872 9245807|9245807|9245807|9245807|9245807|9245807 9250211|9247186|9247186|9250211|9247186|9247186 TCTTGC 6mer3-8 dme-miR-31a-5p 2L + 9245832 9245885 3'utr tai FlyBase G2628.1 CAAGGATCACGTACAACCAAAACTTCTCTTGCGCACGCATTTATGGCTCTAGAT 12 9245860 0.970394221 6 12 70 1 1.255272505 0.222222222 0.333333333 0.555555556 12 0 0 18 2L:9245832-9245885 6 14.5 509 FBgn0041092 2562.806667 37.60666667 57.55666667 0.005657859 0.385569934 0.251925639 -16 -2 -9 0.25 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 9246846 9246851 + 2L_9246846_9246851_+ 0.934886331 0.973585274 0.954235802 0.027364325 tai FBtr0333405|FBtr0303872|FBtr0303871|FBtr0303873|FBtr0304974|FBtr0303870 9245807|9245807|9245807|9245807|9245807|9245807 9247186|9247186|9247186|9250211|9250211|9247186 2L + 9246808 9246874 3'utr tai FlyBase G3340.1 AAGCAAAGCGCGCAAAGCAAAGTTGGCGTTGCAATTTCATGTGAAGGCTATTTTACAGGTTTTGTTT 94 9246849 0.988618154 11 92 856 0.974358974 1.579783597 0.051282051 0.180851064 0.341880342 94 1 2 114 2L:9246808-9246874 6 tai FBtr0304974|FBtr0303870|FBtr0303871|FBtr0303873|FBtr0333405|FBtr0303872 9245807|9245807|9245807|9245807|9245807|9245807 9250211|9247186|9247186|9250211|9247186|9247186 ATGTGA 6mer3-8 dme-miR-1003-3p 2L + 9246822 9246871 3'utr tai FlyBase G2635.1 AAGCAAAGTTGGCGTTGCAATTTCATGTGAAGGCTATTTTACAGGTTTTG 47 9246849 0.843664743 7 47 435 1 1.832508913 0.073529412 0.340425532 0.544117647 47 0 0 68 2L:9246822-9246871 6 68 510 FBgn0041092 2562.806667 37.60666667 57.55666667 0.02653341 1.808190037 1.181444374 -3 -3 -3 0.25 dme-bantam-3p 6mer3-8 TGATCT 2L 9331906 9331911 + 2L_9331906_9331911_+ 0.800295124 0.728326023 0.764310573 0.050889839 Cks30A FBtr0079799 9331350 9331981 2L + 9331816 9331928 3'utr Cks30A FlyBase G3348.1 ATTTTATCATACTTTATGTTGCCATTTCGAAACGGAAGCGAAAAGAAGAATTTTGCTCACTTCTTTTAAGCTTAAATGAAATCTGATTTGTGATCTTGAAATTTTTAATCAAT 198 9331902 0.89813824 16 190 1752 0.965779468 1.705863712 0.326996198 0.247474747 0.433460076 198 5 4 254 2L:9331816-9331928 6 Cks30A FBtr0079799 9331350 9331981 TGATCT 6mer3-8 dme-bantam-3p 2L + 9331880 9331925 3'utr Cks30A FlyBase G2643.1 TTTAAGCTTAAATGAAATCTGATTTGTGATCTTGAAATTTTTAATC 140 9331902 0.68933827 7 135 1233 0.961722488 2.303196057 0.320574163 0.35 0.564593301 140 8 0 201 2L:9331880-9331925 6 160 511 FBgn0010314 382.0366667 41.23 63.10666667 0.418807968 3.880669415 2.535389816 4 4 4 0.25 dme-miR-8-3p 7mer-A1 AGTATTA 2L 9435242 9435248 + 2L_9435242_9435248_+ 0.819765653 0.819381338 0.819573495 0.000271812 scat FBtr0079809 9434914 9435341 2L + 9435200 9435266 3'utr scat FlyBase G3372.1 TGCGTACAAATCAATGGCGGTAAACGATTCCCTTGTTCCTTTAGTATTATTATCGTTAGCTGGATTT 46 9435240 0.92517206 10 46 453 1 1.73239376 0.314814815 0.173913043 0.296296296 46 0 0 54 2L:9435200-9435266 7 scat FBtr0079809 9434914 9435341 AGTATTA 7mer-A1 dme-miR-8-3p 2L + 9435183 9435261 3'utr scat FlyBase G2670.1 TAATCAACAAATTTCAATGCGTACAAATCAATGGCGGTAAACGATTCCCTTGTTCCTTTAGTATTATTATCGTTAGCTG 27 9435240 0.989730428 8 26 253 1 1.653212514 0.244444444 0.555555556 0.733333333 27 0 0 45 2L:9435183-9435261 7 30 512 FBgn0011232 207.99 7.106666667 10.93333333 0.144237704 4.221388368 2.743902439 2 2 2 0.25 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 2L 9492052 9492057 - 2L_9492052_9492057_- 0.843763388 0.979428341 0.911595864 0.095929571 Gdi FBtr0306169|FBtr0345433|FBtr0079862 9491174|9491174|9491934 9492083|9492083|9492083 2L - 9491957 9492073 3'utr Gdi FlyBase G9313.1 AGGCCTCATCTGGTTATGGTGCATTTGGACAGCTCAACATCAGCCACAAACATCGTAGATCGTCTCAGCGTCGTGGCCAAACCTTAAAAAAAAAAATACCCAAGATAAGAAAACCCA 48 9492049 0.98541852 13 48 228 1 1.72427587 0.113207547 0.104166667 0.188679245 48 0 0 53 2L:9491957-9492073 6 Gdi FBtr0345433|FBtr0079862|FBtr0306169 9491174|9491934|9491174 9492083|9492083|9492083 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 2L - 9492036 9492096 stop_codon Gdi FlyBase G7224.1 CGAGGAGCAGTAAACGGGAATGAAGGCCTCATCTGGTTATGGTGCATTTGGACAGCTCAAC 9 9492054 0.974722863 5 8 51 1 1.204119983 0.3125 0.555555556 0.75 9 0 0 16 2L:9492036-9492096 6 17.5 513 FBgn0004868 1474.943333 78.36666667 119.7266667 0.011864863 0.22330923 0.146166268 -8 -3 -5.5 0.25 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 2L 9519762 9519768 + 2L_9519762_9519768_+ 0.80373808 0.79798614 0.80086211 0.004067278 CG33298 FBtr0089854|FBtr0301065|FBtr0301064 9519753|9519753|9519753 9520696|9520696|9520696 2L + 9519743 9519815 stop_codon CG33298 FlyBase G3404.1 ATCAGATTATAACAACGATTACCTGATTAAGCGCCAAAATGCAATTCTTCGGCTATCTCAGCGGCAACTAAAA 59 9519769 0.653021631 10 56 306 0.957746479 1.531478917 0.112676056 0.152542373 0.295774648 59 2 1 68 2L:9519743-9519815 7 CG33298 FBtr0301064|FBtr0301065|FBtr0089854 9519753|9519753|9519753 9520696|9520696|9520696 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2L + 9519726 9519808 stop_codon CG33298 FlyBase G2690.1 CGATTATGGGTCTAAGAATCAGATTATAACAACGATTACCTGATTAAGCGCCAAAATGCAATTCTTCGGCTATCTCAGCGGCA 35 9519769 0.967301194 6 32 174 0.903846154 1.672097858 0.134615385 0.4 0.596153846 35 5 0 47 2L:9519726-9519808 7 39.5 514 FBgn0032120 1173.196667 22.66 34.66333333 0.033668694 1.743159753 1.139532647 -7 -7 -7 0.25 dme-miR-184-5p 6mer3-8 TGATAA 2L 9519895 9519900 + 2L_9519895_9519900_+ 0.808746572 0.95011163 0.879429101 0.09996015 CG33298 FBtr0089854|FBtr0301065|FBtr0089853|FBtr0301064 9519753|9519753|9519767|9519753 9520696|9520696|9520696|9520696 2L + 9519829 9519904 3'utr CG33298 FlyBase G3405.1 TAGCAACCCCCAAAACTTGTACACATGTGCTTTCGCTCTTAATATGTGGCCTTCGACACCGATTATTGATAATATT 20 9519891 0.983592534 8 19 151 1 1.431363764 0.111111111 0.25 0.444444444 20 0 0 27 2L:9519829-9519904 6 CG33298 FBtr0301064|FBtr0089853|FBtr0301065|FBtr0089854 9519753|9519767|9519753|9519753 9520696|9520696|9520696|9520696 TGATAA 6mer3-8 dme-miR-184-5p 2L + 9519842 9519903 3'utr CG33298 FlyBase G2691.1 AACTTGTACACATGTGCTTTCGCTCTTAATATGTGGCCTTCGACACCGATTATTGATAATAT 23 9519881 0.72833523 12 23 169 1 1.568201724 0 0.434782609 0.648648649 23 0 0 37 2L:9519842-9519903 6 8 515 FBgn0032120 1173.196667 22.66 34.66333333 0.006818976 0.353045013 0.230791422 4 14 9 0.25 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 9520288 9520294 + 2L_9520288_9520294_+ 0.675647417 0.662592924 0.669120171 0.009230925 CG33298 FBtr0089854|FBtr0301065|FBtr0089853|FBtr0301064 9519753|9519753|9519767|9519753 9520696|9520696|9520696|9520696 2L + 9520103 9520333 3'utr CG33298 FlyBase G3407.2 ACTAGGGAGCCAGAAGTGCTCGAGAATTGAACCCAACCTAACCGACTATTGTTAAATAGAAGCGAAAATGCAATGCTTATTTATGTGTACGATTATTTAAACTAGCGACTAATAGATGTATCACCCTAACAGAAATACTTGACAATTCAAACACAACAGAACTCCATTGCGAGTTCGATGATAAGGCTGTGATTCTACACTCATGAAGGATATACCTAAGCATATGATATA 667 9520284 0.872483124 32 627 5108 0.941634241 2.161966616 0.029831388 0.142428786 0.258106355 667 41 4 726 2L:9520103-9520333 7 CG33298 FBtr0301064|FBtr0089853|FBtr0301065|FBtr0089854 9519753|9519767|9519753|9519753 9520696|9520696|9520696|9520696 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L + 9520200 9520334 3'utr CG33298 FlyBase G2694.1 TAAACTAGCGACTAATAGATGTATCACCCTAACAGAAATACTTGACAATTCAAACACAACAGAACTCCATTGCGAGTTCGATGATAAGGCTGTGATTCTACACTCATGAAGGATATACCTAAGCATATGATATAT 441 9520283 0.813376428 19 414 3437 0.939882698 2.329736775 0.021994135 0.392290249 0.607038123 441 39 2 641 2L:9520200-9520334 7 510.5 516 FBgn0032120 1173.196667 22.66 34.66333333 0.435135911 22.52868491 14.72737763 4 5 4.5 0.25 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 9539238 9539244 + 2L_9539238_9539244_+ 0.759711671 0.762352 0.761031836 0.001866974 Oatp30B FBtr0079825|FBtr0079826|FBtr0079828|FBtr0079827 9538653|9538653|9538653|9538653 9540060|9540060|9540060|9540045 2L + 9539212 9539257 3'utr Oatp30B FlyBase G3412.1 ATTTAACCATTGTCAATGGAAATTGTGCTGTGAAACAATTTGTGAG 201 9539235 0.727564593 5 195 1097 0.977011494 1.62838893 0.011494253 0.23880597 0.413793103 201 1 5 255 2L:9539212-9539257 7 Oatp30B FBtr0079827|FBtr0079828|FBtr0079826|FBtr0079825 9538653|9538653|9538653|9538653 9540045|9540060|9540060|9540060 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L + 9539213 9539260 3'utr Oatp30B FlyBase G2697.1 TTTAACCATTGTCAATGGAAATTGTGCTGTGAAACAATTTGTGAGTAT 155 9539235 0.719439841 5 154 833 0.995594714 2.354108439 0 0.35483871 0.559471366 155 1 0 226 2L:9539213-9539260 7 177.5 517 FBgn0032123 86 1.96 2.986666667 2.063953488 90.56122449 59.43080357 3 3 3 0.25 dme-miR-305-5p 7mer-A1 GTACAAA 2L 9573472 9573478 + 2L_9573472_9573478_+ 0.781431008 0.781700274 0.781565641 0.000190424 CG3838 FBtr0079835|FBtr0079834 9572964|9572964 9573572|9573572 2L + 9573414 9573485 3'utr CG3838 FlyBase G3419.1 TGTTAGTTTAAGGACACTGTATATACGCTGCTATTGAAACCTAAACTATAGAATCTGTGTACAAATGAATTT 21 9573447 0.976981402 6 20 138 0.962962963 1.414973348 0 0.238095238 0.407407407 21 1 0 26 2L:9573414-9573485 7 CG3838 FBtr0079835|FBtr0079834 9572964|9572964 9573572|9573572 GTACAAA 7mer-A1 dme-miR-305-5p 2L + 9573424 9573484 3'utr CG3838 FlyBase G2703.1 AGGACACTGTATATACGCTGCTATTGAAACCTAAACTATAGAATCTGTGTACAAATGAATT 10 9573468 0.981415008 7 9 59 0.875 0.669006781 0.0625 0.3 0.5625 10 0 2 14 2L:9573424-9573484 7 7 518 FBgn0032130 513.3333333 25.81 39.59333333 0.013636364 0.271212708 0.176797441 25 4 14.5 0.25 dme-miR-1008-3p 6mer2-7 GCTGTG 2L 9573534 9573539 + 2L_9573534_9573539_+ 0.99995307 0.999939433 0.999946251 9.69E-06 CG3838 FBtr0079835|FBtr0079834 9572964|9572964 9573572|9573572 2L + 9573509 9573552 3'utr CG3838 FlyBase G3420.1 TAAAGAGATAGATCGATATCAAACTGCTGTGTGTAATAATAAAC 17 9573540 0.967257934 5 16 120 0.954545455 1.322219295 0.045454545 0.235294118 0.409090909 17 1 0 21 2L:9573509-9573552 6 CG3838 FBtr0079835|FBtr0079834 9572964|9572964 9573572|9573572 GCTGTG 6mer2-7 dme-miR-1008-3p 2L + 9573517 9573553 3'utr CG3838 FlyBase G2704.1 TAGATCGATATCAAACTGCTGTGTGTAATAATAAACA 8 9573540 0.672032578 3 7 58 0.9 0.954242509 0 0.25 0.4 8 1 0 9 2L:9573517-9573553 6 12.5 519 FBgn0032130 513.3333333 25.81 39.59333333 0.024350649 0.484308408 0.315709715 -6 -6 -6 0.25 dme-miR-184-3p 6mer2-7 CCGTCC 2L 9615705 9615710 + 2L_9615705_9615710_+ 0.980562078 0.977216032 0.978889055 0.00236605 Trx-2 FBtr0079839|FBtr0079840 9615680|9615680 9616404|9616047 2L + 9615577 9615781 stop_codon Trx-2 FlyBase G3425.1 TCCAGCATGCCCACCTTCGTGTTCCTCAAGAACGGCGTCAAGGTCGAAGAGTTCGCCGGAGCCAACGCCAAGCGTCTGGAGGATGTCATCAAGGCCAATATCTAAGTGGGCAGCGCATAGACGTCTGGCCGTCCCCCTGATCCACCTATGAGTTTTCTTCATAACATTTAGTTAATTAATTAATTCCATAAGTGCAGGGTTTTGC 90 9615702 0.980793021 26 83 594 0.923076923 1.380211242 0.230769231 0.155555556 0.269230769 90 5 3 96 2L:9615577-9615781 6 Trx-2 FBtr0079840|FBtr0079839 9615680|9615680 9616047|9616404 CCGTCC 6mer2-7 dme-miR-184-3p 2L + 9615616 9615741 stop_codon Trx-2 FlyBase G2707.1 AAGGTCGAAGAGTTCGCCGGAGCCAACGCCAAGCGTCTGGAGGATGTCATCAAGGCCAATATCTAAGTGGGCAGCGCATAGACGTCTGGCCGTCCCCCTGATCCACCTATGAGTTTTCTTCATAAC 47 9615702 0.885607615 16 42 263 0.944444444 1.531478917 0.166666667 0.361702128 0.583333333 47 3 1 68 2L:9615616-9615741 6 32 520 FBgn0040070 814.6666667 126.4433333 193.1533333 0.039279869 0.253077795 0.165671487 3 3 3 0.25 dme-miR-1002-5p 6mer3-8 CTACTT 2L 9682843 9682848 - 2L_9682843_9682848_- 0.467380502 0.733820677 0.60060059 0.188401672 Pka-C1 FBtr0079851|FBtr0079852 9682313|9682313 9696504|9696504 2L - 9682827 9682871 3'utr Pka-C1 FlyBase G9342.1 GATACATTATGCACTAATTTGTACTACTTTTATCGTCTATCTATT 16 9682852 0.80132787 2 16 205 1 1.230448921 0.117647059 0.0625 0.117647059 16 0 0 17 2L:9682827-9682871 6 Pka-C1 FBtr0079852|FBtr0079851 9682313|9682313 9696504|9696504 CTACTT 6mer3-8 dme-miR-1002-5p 2L - 9682831 9682864 3'utr Pka-C1 FlyBase G7262.1 TATGCACTAATTTGTACTACTTTTATCGTCTATC 13 9682852 0.693629994 2 12 137 0.894736842 1.230448921 0 0.461538462 0.631578947 13 2 0 17 2L:9682831-9682864 6 14.5 521 FBgn0000273 1905.386667 46.66 72.09 0.007610004 0.31075868 0.201137467 4 4 4 0.25 dme-miR-79-3p 7mer-A1 AGCTTTA 2L 9682919 9682925 - 2L_9682919_9682925_- 0.305473348 0.306192199 0.305832773 0.000508339 Pka-C1 FBtr0079851|FBtr0079852 9682313|9682313 9696504|9696504 2L - 9682875 9682947 3'utr Pka-C1 FlyBase G9343.1 AATATCTGAGGAGCCCAACCTGAGCTTTACTATCTGACTAACGATTTGAATGCATGCTTTACGTTATTGTATT 61 9682927 0.983869295 6 60 378 0.985074627 1.819543936 0.23880597 0.049180328 0.134328358 61 1 0 66 2L:9682875-9682947 7 Pka-C1 FBtr0079852|FBtr0079851 9682313|9682313 9696504|9696504 AGCTTTA 7mer-A1 dme-miR-79-3p 2L - 9682883 9682946 3'utr Pka-C1 FlyBase G7263.1 ATATCTGAGGAGCCCAACCTGAGCTTTACTATCTGACTAACGATTTGAATGCATGCTTTACGTT 43 9682927 0.98910942 3 43 283 1 1.755874856 0.315789474 0.302325581 0.473684211 43 0 0 57 2L:9682883-9682946 7 49.5 522 FBgn0000273 1905.386667 46.66 72.09 0.025978979 1.060865838 0.686641698 2 2 2 0.25 dme-miR-283-5p 7mer-m1 GATATTT 2L 9684995 9685001 - 2L_9684995_9685001_- 0.744208036 0.488374372 0.616291204 0.180901673 Pka-C1 FBtr0079851|FBtr0335495|FBtr0079852 9682313|9683360|9682313 9696504|9696504|9696504 2L - 9684964 9685020 3'utr Pka-C1 FlyBase G9351.1 ATTTAACCACGAGACTACAGATATTTAGTTGTAAACGTAGCTTAGTCTTAACTAAAG 9 9684993 0.863093103 6 8 73 0.9 0.954242509 0 0.111111111 0.2 9 1 0 9 2L:9684964-9685020 7 Pka-C1 FBtr0335495|FBtr0079852|FBtr0079851 9683360|9682313|9682313 9696504|9696504|9696504 GATATTT 7mer-m1 dme-miR-283-5p 2L - 9684964 9685018 3'utr Pka-C1 FlyBase G7267.1 TTAACCACGAGACTACAGATATTTAGTTGTAAACGTAGCTTAGTCTTAACTAAAG 6 9684996 0.982125427 4 6 50 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 2L:9684964-9685018 7 7 523 FBgn0000273 1905.386667 46.66 72.09 0.003673795 0.150021432 0.097100846 -8 -5 -6.5 0.25 dme-miR-277-3p 6mer2-7 GCATTT 2L 9708303 9708308 + 2L_9708303_9708308_+ 0.964938668 0.719860153 0.84239941 0.173296669 pelo FBtr0079847 9708268 9708883 2L + 9708265 9708345 stop_codon pelo FlyBase G3490.1 ACTAGGATCATAAATAGGAATAGCTTCATGGAATCTTGGCATTTGATAACGGAAAATTTTGACTTAGGAACTTAACTAGCG 40 9708293 0.974859371 8 39 281 0.980392157 1.397940009 0.215686275 0.225 0.392156863 40 0 1 50 2L:9708265-9708345 6 pelo FBtr0079847 9708268 9708883 GCATTT 6mer2-7 dme-miR-277-3p 2L + 9708254 9708346 stop_codon pelo FlyBase G2746.1 TAGCGATAGCGACTAGGATCATAAATAGGAATAGCTTCATGGAATCTTGGCATTTGATAACGGAAAATTTTGACTTAGGAACTTAACTAGCGA 27 9708323 0.98099544 8 24 170 0.923076923 1.255272505 0.025641026 0.296296296 0.512820513 27 2 1 36 2L:9708254-9708346 6 21 524 FBgn0011207 455.0266667 27.06 41.48666667 0.046151141 0.776053215 0.506186727 10 -20 -5 0.25 dme-miR-968-5p 7mer-A1 CTACTTA 2L 9762246 9762252 + 2L_9762246_9762252_+ 0.646042014 0.657626398 0.651834206 0.008191408 zf30C FBtr0079865 9762140 9762375 2L + 9762236 9762274 3'utr zf30C FlyBase G3518.1 ATAATAATATCTACTTAATGACTGGATTAATTAAATAAC 11 9762252 0.632889169 6 10 86 0.933333333 0.84509804 0.066666667 0.272727273 0.466666667 11 0 1 14 2L:9762236-9762274 7 zf30C FBtr0079865 9762140 9762375 CTACTTA 7mer-A1 dme-miR-968-5p 2L + 9762236 9762273 3'utr zf30C FlyBase G2770.1 ATAATAATATCTACTTAATGACTGGATTAATTAAATAA 10 9762250 0.728046111 8 10 76 1 1.255272505 0 0.6 0.777777778 10 0 0 18 2L:9762236-9762273 7 10 525 FBgn0022720 989.03 40.54 62.34666667 0.010110917 0.246669956 0.160393499 -6 -4 -5 0.25 dme-miR-317-3p 7mer-m8 TGTGTTC 2L 9935126 9935132 - 2L_9935126_9935132_- 0.405167117 0.618371906 0.511769511 0.15075856 CG31712 FBtr0079896|FBtr0331636 9934765|9934765 9935255|9937003 2L - 9935089 9935143 3'utr CG31712 FlyBase G9443.1 ATTGTTGTAATTGTGTTCTATATTATTTTTATTATTTTAAGGACGAGCTGTGGTG 13 9935133 0.992917741 3 13 159 1 1.176091259 0.333333333 0.153846154 0.266666667 13 0 0 15 2L:9935089-9935143 7 CG31712 FBtr0331636|FBtr0079896 9934765|9934765 9937003|9935255 TGTGTTC 7mer-m8 dme-miR-317-3p 2L - 9935107 9935147 3'utr CG31712 FlyBase G7341.1 TTTCATTGTTGTAATTGTGTTCTATATTATTTTTATTATTT 14 9935133 0.771693206 3 12 182 0.888888889 1.380211242 0.481481481 0.428571429 0.703703704 14 3 0 24 2L:9935107-9935147 7 12.5 526 FBgn0051712 467.1633333 25.39666667 38.91333333 0.026757237 0.492190576 0.321226658 1 1 1 0.25 dme-miR-1006-3p 6mer2-7 GAATTT 2L 9960548 9960553 - 2L_9960548_9960553_- 0.997297573 0.974496027 0.9858968 0.016123166 CG5850 FBtr0309209|FBtr0309210|FBtr0309211|FBtr0329986|FBtr0079890|FBtr0303901 9959246|9960448|9960448|9960448|9960448|9960448 9961354|9961354|9961354|9961003|9961354|9961354 2L - 9960458 9960620 3'utr CG5850 FlyBase G9459.1 ATGTAGGTCTCCAACTTTTTGTGTGGCGAAGTAGTTAATTAAAAAAAAACATGCCTGAACCGATTGTGAATTTTGTGACTGCCGCCGGTCAGAAAAGGGCGTGACTTGTATTTAAATAGAAATTCTTATTGTAAAACTAATATACACATCAATAATATAATAT 107 9960556 0.983290046 19 102 789 0.955555556 1.809559715 0.162962963 0.224299065 0.385185185 107 5 1 129 2L:9960458-9960620 6 CG5850 FBtr0079890|FBtr0303901|FBtr0309211|FBtr0329986|FBtr0309209|FBtr0309210 9960448|9960448|9960448|9960448|9959246|9960448 9961354|9961354|9961354|9961003|9961354|9961354 GAATTT 6mer2-7 dme-miR-1006-3p 2L - 9960460 9960579 3'utr CG5850 FlyBase G7350.1 AAAAAAAACATGCCTGAACCGATTGTGAATTTTGTGACTGCCGCCGGTCAGAAAAGGGCGTGACTTGTATTTAAATAGAAATTCTTATTGTAAAACTAATATACACATCAATAATATAAT 87 9960549 0.983647737 15 84 639 0.965517241 2.049218023 0.181034483 0.287356322 0.465517241 87 4 0 112 2L:9960460-9960579 6 80.5 527 FBgn0032172 968.71 41.72666667 64.24 0.083100205 1.92922192 1.253113325 3 -4 -0.5 0.25 dme-miR-33-5p 7mer-A1 AATGCAA 2L 9964511 9964517 - 2L_9964511_9964517_- 0.740756973 0.762398151 0.751577562 0.015302639 Dref FBtr0310483|FBtr0079889 9964278|9964145 9964544|9964544 2L - 9964498 9964557 stop_codon Dref FlyBase G9473.2 TCACAACAATTAGTCTGCACTGGCGACTACTGTTTCTTATAATGCAAATACTTTTTAATT 29 9964519 0.792664869 9 25 265 0.894736842 1.531478917 0.157894737 0.206896552 0.394736842 29 4 0 34 2L:9964498-9964557 7 Dref FBtr0310483|FBtr0079889 9964278|9964145 9964544|9964544 AATGCAA 7mer-A1 dme-miR-33-5p 2L - 9964442 9964546 stop_codon Dref FlyBase G7361.1 AGTCTGCACTGGCGACTACTGTTTCTTATAATGCAAATACTTTTTAATTACTTTTAACGTAATCCGATCTTGTGTATATGAAAATGACTACCAGGGGCGAGGCAA 17 9964518 0.991908626 11 14 142 0.793103448 1.361727836 0.24137931 0.529411765 0.724137931 17 6 0 23 2L:9964442-9964546 7 14.5 528 FBgn0015664 973.63 41.70666667 63.79666667 0.014892721 0.34766624 0.227284602 2 1 1.5 0.25 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 9994974 9994981 + 2L_9994974_9994981_+ 0.623189744 0.618981877 0.62108581 0.002975364 bib FBtr0329984|FBtr0079929 9994780|9994657 9995538|9995538 2L + 9994964 9994991 3'utr bib FlyBase G3617.1 AAAGATCATGTACGCTTAAGGAACTAAT 12 9994973 0.71476225 3 11 55 0.9375 1.176091259 0.125 0.333333333 0.5 12 1 0 15 2L:9994964-9994991 8 bib FBtr0329984|FBtr0079929 9994780|9994657 9995538|9995538 TACGCTTA 8mer-A1 dme-miR-965-3p 2L + 9994959 9994990 3'utr bib FlyBase G2856.1 CTAGCAAAGATCATGTACGCTTAAGGAACTAA 8 9994972 0.793843936 3 7 37 0.818181818 0.954242509 0.363636364 0.375 0.545454545 8 2 0 9 2L:9994959-9994990 8 10 529 FBgn0000180 1.333333333 0.05 0.08 7.5 200 125 1 2 1.5 0.25 dme-miR-14-3p 7mer-A1 AGACTGA 2L 9995043 9995049 + 2L_9995043_9995049_+ 0.81834837 0.818068457 0.818208413 0.000197919 bib FBtr0329984|FBtr0079929 9994780|9994657 9995538|9995538 2L + 9995002 9995066 3'utr bib FlyBase G3618.1 ATTCACCGAAGGCTAGACTAAACGAGTGATCTAGATGATCTAGACTGAAAGACAGGTGCATTTAA 15 9995040 0.952063857 5 15 65 1 1.278753601 0.157894737 0.266666667 0.421052632 15 0 0 19 2L:9995002-9995066 7 bib FBtr0329984|FBtr0079929 9994780|9994657 9995538|9995538 AGACTGA 7mer-A1 dme-miR-14-3p 2L + 9995001 9995065 3'utr bib FlyBase G2857.1 CATTCACCGAAGGCTAGACTAAACGAGTGATCTAGATGATCTAGACTGAAAGACAGGTGCATTTA 21 9995041 0.953744492 8 19 86 0.966666667 1.161368002 0.1 0.333333333 0.533333333 21 0 1 29 2L:9995001-9995065 7 15.5 530 FBgn0000180 1.333333333 0.05 0.08 11.625 310 193.75 3 2 2.5 0.25 dme-miR-14-3p 7mer-A1 AGACTGA 2L 9995216 9995222 + 2L_9995216_9995222_+ 0.818710521 0.794299888 0.806505204 0.017260901 bib FBtr0329984|FBtr0079929 9994780|9994657 9995538|9995538 2L + 9995193 9995242 3'utr bib FlyBase G3619.1 ATGTTTCTTGTAAATGCAAAACTAGACTGAACTTACCTAAAGCATTTTGT 18 9995215 0.916712645 6 17 102 0.95 0.977723605 0.15 0.111111111 0.2 18 0 1 19 2L:9995193-9995242 7 bib FBtr0329984|FBtr0079929 9994780|9994657 9995538|9995538 AGACTGA 7mer-A1 dme-miR-14-3p 2L + 9995200 9995230 3'utr bib FlyBase G2858.1 TTGTAAATGCAAAACTAGACTGAACTTACCT 9 9995215 0.869672552 3 9 40 1 1.230448921 0 0.555555556 0.764705882 9 0 0 17 2L:9995200-9995230 7 13.5 531 FBgn0000180 1.333333333 0.05 0.08 10.125 270 168.75 1 1 1 0.25 dme-miR-14-3p 6mer3-8 AAGACT 2R 10029424 10029429 - 2R_10029424_10029429_- 0.733852501 0.9642916 0.84907205 0.16294505 CG1407 FBtr0339418|FBtr0088436|FBtr0339420|FBtr0339419 10029261|10029261|10029261|10029261 10029804|10029804|10029804|10029804 2R - 10029377 10029502 3'utr CG1407 FlyBase G21603.1 TATCCTCCGAAGATTTGTACCTTGCTAATGCATTCATGAAACCAACTATCCTTGTAGATATCGAAAGATCTTCAAGACTTAAACCTAATGATAAGCAATGAGATTTCAGTACACACTATTAACACA 36 10029432 0.931954344 13 31 253 0.880952381 1.091080469 0.071428571 0.111111111 0.238095238 36 3 2 37 2R:10029377-10029502 6 CG1407 FBtr0339419|FBtr0088436|FBtr0339420|FBtr0339418 10029261|10029261|10029261|10029261 10029804|10029804|10029804|10029804 AAGACT 6mer3-8 dme-miR-14-3p 2R - 10029406 10029500 3'utr CG1407 FlyBase G16401.1 TCCTCCGAAGATTTGTACCTTGCTAATGCATTCATGAAACCAACTATCCTTGTAGATATCGAAAGATCTTCAAGACTTAAACCTAATGATAAGCA 26 10029432 0.743163647 10 21 161 0.756756757 1.447158031 0.243243243 0.346153846 0.540540541 26 9 0 28 2R:10029406-10029500 6 16 532 FBgn0033474 835.29 47.03 72.28 0.019155024 0.340208378 0.221361372 3 3 3 0.25 dme-miR-14-3p 7mer-A1 AGACTGA 2R 10036098 10036104 - 2R_10036098_10036104_- 0.816272009 0.8176169 0.816944455 0.000950988 oys FBtr0345630|FBtr0088434|FBtr0339416|FBtr0345629 10034593|10035771|10035534|10035534 10036943|10036943|10036943|10036943 2R - 10036088 10036126 3'utr oys FlyBase G21617.1 AAGTCAACCAAATCCTAACTTTAGACTGAAGCTATTGAC 45 10036106 0.688415768 5 45 251 1 1.748188027 0 0.177777778 0.339285714 45 0 0 56 2R:10036088-10036126 7 oys FBtr0339416|FBtr0345629|FBtr0345630|FBtr0088434 10035534|10035534|10034593|10035771 10036943|10036943|10036943|10036943 AGACTGA 7mer-A1 dme-miR-14-3p 2R - 10036067 10036121 3'utr oys FlyBase G16412.1 AACCAAATCCTAACTTTAGACTGAAGCTATTGACATTTACTAAGCAAACAAAAAG 20 10036106 0.967176757 6 20 108 1 1.544068044 0 0.45 0.685714286 20 0 0 35 2R:10036067-10036121 7 32 533 FBgn0033476 2953.663333 97.33666667 148.7366667 0.010834004 0.328755865 0.215145335 2 2 2 0.25 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 10071028 10071034 - 2R_10071028_10071034_- 0.646940796 0.648182668 0.647561732 0.000878156 CG1371 FBtr0088428 10070979 10071210 2R - 10070963 10071073 3'utr CG1371 FlyBase G21645.1 ATTTTTCACTTTCCATACATAGATTGAGGCAAGTTTATTTGTGTTCGTTATCCACTCTTATAGCTAAAATAAATAAATACAATTAAATAGATTAATTAGACAAGGCTGTTC 125 10071035 0.991200133 11 124 1316 0.993506494 2.184691431 0.181818182 0.16 0.318181818 125 1 0 153 2R:10070963-10071073 7 CG1371 FBtr0088428 10070979 10071210 TGTGTTC 7mer-m8 dme-miR-317-3p 2R - 10070995 10071064 3'utr CG1371 FlyBase G16436.1 TTTCCATACATAGATTGAGGCAAGTTTATTTGTGTTCGTTATCCACTCTTATAGCTAAAATAAATAAATA 71 10071035 0.851982903 7 70 724 0.99 1.995635195 0.18 0.323943662 0.52 71 1 0 99 2R:10070995-10071064 7 82 534 FBgn0033482 1240.746667 38.63666667 59.06666667 0.066089237 2.122336295 1.388261851 1 1 1 0.25 dme-miR-1003-3p 7mer-A1 TGTGAGA 2R 10071122 10071128 - 2R_10071122_10071128_- 0.574245352 0.584209968 0.57922766 0.007046036 CG1371 FBtr0088428 10070979 10071210 2R - 10071111 10071177 3'utr CG1371 FlyBase G21647.1 AGTCACATTTCGAGGTATTCGCGGTAGGTATTCATTTGGTTTTTGTTTCTGTGAGATTTTGTTTAAC 28 10071131 0.668112048 12 25 342 0.947368421 1.255272505 0.447368421 0.25 0.447368421 28 1 1 36 2R:10071111-10071177 7 CG1371 FBtr0088428 10070979 10071210 TGTGAGA 7mer-A1 dme-miR-1003-3p 2R - 10071110 10071251 stop_codon CG1371 FlyBase G16438.1 AGATAAATGCCATCAAGAAGAAAAAGACCAAGAAGATTTAGTTCCGACTGATAGTCGCATTAGTTGTTCAATTTAGTCACATTTCGAGGTATTCGCGGTAGGTATTCATTTGGTTTTTGTTTCTGTGAGATTTTGTTTAACC 32 10071132 0.991875272 16 29 315 0.962264151 1.707570176 0.113207547 0.46875 0.679245283 32 2 0 51 2R:10071110-10071251 7 17 535 FBgn0033482 1240.746667 38.63666667 59.06666667 0.013701427 0.439996549 0.287810384 3 4 3.5 0.25 dme-miR-980-3p 8mer-A1 GGCAGCTA 2R 10095831 10095838 + 2R_10095831_10095838_+ 0.667040594 0.665901634 0.666471114 0.000805395 CG2269 FBtr0088407|FBtr0305653|FBtr0088408|FBtr0088409 10095242|10095242|10095242|10095242 10096416|10096416|10096416|10096416 2R + 10095811 10095858 3'utr CG2269 FlyBase G14538.1 TGAAAGGCAGAGCTCACATTGGCAGCTAGTCCTCCAAAGTCACCGTCA 17 10095829 0.93294433 3 17 87 1 1.301029996 0.1 0.117647059 0.25 17 0 0 20 2R:10095811-10095858 8 CG2269 FBtr0088408|FBtr0088409|FBtr0088407|FBtr0305653 10095242|10095242|10095242|10095242 10096416|10096416|10096416|10096416 GGCAGCTA 8mer-A1 dme-miR-980-3p 2R + 10095810 10095857 3'utr CG2269 FlyBase G11062.1 ATGAAAGGCAGAGCTCACATTGGCAGCTAGTCCTCCAAAGTCACCGTC 8 10095829 0.968057719 3 8 43 1 1.146128036 0 0.5 0.714285714 8 0 0 14 2R:10095810-10095857 8 12.5 536 FBgn0033484 2.333333333 0.08 0.12 5.357142857 156.25 104.1666667 2 2 2 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 2R 10098489 10098494 + 2R_10098489_10098494_+ 0.651512124 0.660464432 0.655988278 0.006330232 Jra FBtr0088411|FBtr0088410 10098135|10098135 10098556|10098556 2R + 10098453 10098560 3'utr Jra FlyBase G14546.1 GTTATTAGTATAAGCTAGTGTTAATCAAGTATTATCTGTGTTGAACGTAAGATAATATGTAATGTACTTTTAAAATATACGTATATTTTCTGCACTTGATATATACAT 93 10098486 0.988045796 22 84 841 0.914529915 1.330413773 0.444444444 0.239130435 0.401709402 92 6 4 107 2R:10098453-10098560 6 Jra FBtr0088411|FBtr0088410 10098135|10098135 10098556|10098556 TGTGTT 6mer3-8 dme-miR-317-3p 2R + 10098313 10098546 3'utr Jra FlyBase G11068.1 CGAACTCCTGGAGGAGGAGAGCGATAACGAACAGCCTCTGGTGCTCTACATCCTCGCGGACGACGCAACCTGAGGCTTTGTGCCTTTCTTTGGTTTTAGCTGCAATATCTGAAATGCTTCTTAAGTGTTTTGTTTACTTAGTTATTAGTATAAGCTAGTGTTAATCAAGTATTATCTGTGTTGAACGTAAGATAATATGTAATGTACTTTTAAAATATACGTATATTTTCTGCA 109 10098487 0.989263631 39 93 869 0.875776398 0.973127854 0.329192547 0.376146789 0.577639752 109 6 14 141 2R:10098313-10098546 6 48.5 537 FBgn0001291 1037.55 83.52666667 128.0966667 0.046744735 0.580652885 0.378620313 3 2 2.5 0.25 dme-miR-34-5p 6mer3-8 CACTGC 2R 10137036 10137041 + 2R_10137036_10137041_+ 0.999761128 0.934742074 0.967251601 0.045975376 gem FBtr0346634|FBtr0089758|FBtr0339428|FBtr0089759 10137011|10137011|10137011|10137011 10137472|10137472|10137472|10137472 2R + 10136948 10137059 stop_codon gem FlyBase G14608.1 ACGCGCTGGAGGTGCAGGCCGGCAAGGTGATCCTTAAGCTGATCAACAAGCAGGACAACAACTAAGCGATGTTCTGGCAACGCGTATGCACTGCAGTAGAGACCACCCGAGC 18 10137037 0.946080813 8 16 63 0.9 1.255272505 0.35 0.111111111 0.2 18 2 0 18 2R:10136948-10137059 6 gem FBtr0339428|FBtr0089759|FBtr0346634|FBtr0089758 10137011|10137011|10137011|10137011 10137472|10137472|10137472|10137472 CACTGC 6mer3-8 dme-miR-34-5p 2R + 10136979 10137107 stop_codon gem FlyBase G11114.1 CCTTAAGCTGATCAACAAGCAGGACAACAACTAAGCGATGTTCTGGCAACGCGTATGCACTGCAGTAGAGACCACCCGAGCAATCAAGTATAGTTTATAGCATTTACACGCAGTAAGATGGCACATCGA 13 10137034 0.96976766 10 12 70 0.9375 1.176091259 0.125 0.153846154 0.3125 13 1 0 15 2R:10136979-10137107 6 6.5 538 FBgn0050011 3271.46 66.12333333 101.57 0.00198688 0.098301154 0.063995274 -1 2 0.5 0.25 dme-miR-277-3p 7mer-A1 GCATTTA 2R 10137078 10137084 + 2R_10137078_10137084_+ 0.819164019 0.823308275 0.821236147 0.002930463 gem FBtr0346634|FBtr0089758|FBtr0339428|FBtr0089759 10137011|10137011|10137011|10137011 10137472|10137472|10137472|10137472 2R + 10137064 10137168 3'utr gem FlyBase G14609.1 AAGTATAGTTTATAGCATTTACACGCAGTAAGATGGCACATCGAAACCGTTTTCTATATAGGTTTTAATTTGTATGAGATTTCGCGCAGCAATTTTGAACAAGTA 27 10137075 0.830986318 14 24 239 0.903225806 1.146128036 0.258064516 0.148148148 0.258064516 27 2 1 28 2R:10137064-10137168 7 gem FBtr0339428|FBtr0089759|FBtr0346634|FBtr0089758 10137011|10137011|10137011|10137011 10137472|10137472|10137472|10137472 GCATTTA 7mer-A1 dme-miR-277-3p 2R + 10136979 10137107 stop_codon gem FlyBase G11114.1 CCTTAAGCTGATCAACAAGCAGGACAACAACTAAGCGATGTTCTGGCAACGCGTATGCACTGCAGTAGAGACCACCCGAGCAATCAAGTATAGTTTATAGCATTTACACGCAGTAAGATGGCACATCGA 13 10137096 0.96976766 10 12 70 0.9375 1.176091259 0.125 0.153846154 0.3125 13 1 0 15 2R:10136979-10137107 7 7 539 FBgn0050011 3271.46 66.12333333 101.57 0.002139717 0.105862782 0.068917988 3 -18 -7.5 0.25 dme-miR-92b-3p 6mer3-8 GTGCAA 2R 10137220 10137225 + 2R_10137220_10137225_+ 0.888480354 0.953946481 0.921213417 0.046291523 gem FBtr0346634|FBtr0089758|FBtr0339428|FBtr0089759 10137011|10137011|10137011|10137011 10137472|10137472|10137472|10137472 2R + 10137172 10137239 3'utr gem FlyBase G14610.1 AGCAAGCAGCCTCTAACCCTGTTCCCTAAAATCTTTGTTAAAGAACTAGTGCAAAATATTTAAGTTTC 59 10137218 0.919208087 6 56 351 0.973684211 1.568201724 0 0.220338983 0.394736842 59 1 1 74 2R:10137172-10137239 6 gem FBtr0339428|FBtr0089759|FBtr0346634|FBtr0089758 10137011|10137011|10137011|10137011 10137472|10137472|10137472|10137472 GTGCAA 6mer3-8 dme-miR-92b-3p 2R + 10137114 10137238 3'utr gem FlyBase G11115.1 TTTCTATATAGGTTTTAATTTGTATGAGATTTCGCGCAGCAATTTTGAACAAGTAAAAAGCAAGCAGCCTCTAACCCTGTTCCCTAAAATCTTTGTTAAAGAACTAGTGCAAAATATTTAAGTTT 30 10137218 0.9808813 7 27 193 0.911764706 1.491361694 0.088235294 0.172413793 0.294117647 29 3 0 31 2R:10137114-10137238 6 28 540 FBgn0050011 3271.46 66.12333333 101.57 0.00855887 0.423451127 0.27567195 2 2 2 0.25 dme-miR-317-3p 8mer-A1 TGTGTTCA 2R 10145966 10145973 - 2R_10145966_10145973_- 0.629612753 0.629462019 0.629537386 0.000106632 KCNQ FBtr0310097|FBtr0310094|FBtr0299833|FBtr0301443|FBtr0310096|FBtr0310093|FBtr0310095|FBtr0301444 10145895|10145895|10145895|10145895|10145895|10145895|10145895|10145895 10146074|10146074|10146074|10146074|10146074|10146074|10146074|10146074 2R - 10145934 10145989 3'utr KCNQ FlyBase G21678.1 ATTTTGGGACATCATTTGTGTTCAATTAATTGGTAGCAAACAAATGAAAATCAAAC 6 10145974 0.990604435 3 6 60 1 0.77815125 0.166666667 0 0 6 0 0 6 2R:10145934-10145989 8 KCNQ FBtr0310096|FBtr0310093|FBtr0310095|FBtr0301444|FBtr0310097|FBtr0310094|FBtr0299833|FBtr0301443 10145895|10145895|10145895|10145895|10145895|10145895|10145895|10145895 10146074|10146074|10146074|10146074|10146074|10146074|10146074|10146074 TGTGTTCA 8mer-A1 dme-miR-317-3p 2R - 10145935 10145988 3'utr KCNQ FlyBase G16451.1 TTTTGGGACATCATTTGTGTTCAATTAATTGGTAGCAAACAAATGAAAATCAAA 7 10145974 0.987785899 4 7 55 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 2R:10145935-10145988 8 4.5 541 FBgn0033494 83.10666667 3.453333333 5.296666667 0.054147281 1.303088803 0.849590938 1 1 1 0.25 dme-bantam-3p 6mer3-8 TGATCT 2R 10156573 10156578 - 2R_10156573_10156578_- 0.977064458 0.96469214 0.970878299 0.008748608 mlt FBtr0088370|FBtr0331945|FBtr0088369 10156388|10155914|10156388 10156669|10156669|10156669 2R - 10156567 10156607 3'utr mlt FlyBase G21682.1 CTTCGTCCCCCGCCTGGTGCTACAACTTGTGATCTTGTACA 18 10156581 0.64123762 6 18 151 1 1.397940009 0.4 0.333333333 0.52 18 0 0 25 2R:10156567-10156607 6 mlt FBtr0331945|FBtr0088369|FBtr0088370 10155914|10156388|10156388 10156669|10156669|10156669 TGATCT 6mer3-8 dme-bantam-3p 2R - 10156569 10156592 3'utr mlt FlyBase G16454.1 GGTGCTACAACTTGTGATCTTGTA 10 10156572 0.675230975 4 8 74 0.833333333 0.698970004 0.416666667 0.2 0.333333333 10 1 1 10 2R:10156569-10156592 6 14 542 FBgn0265512 12.66666667 0.613333333 0.95 1.105263158 22.82608696 14.73684211 3 -6 -1.5 0.25 dme-miR-283-5p 8mer-m1 TGATATTT 2R 10307099 10307106 - 2R_10307099_10307106_- 0.473522406 0.47708163 0.475302018 0.002516734 JhI-1 FBtr0088360 10307028 10307304 2R - 10307089 10307145 3'utr JhI-1 FlyBase G21693.1 AATTAATAGGGCACCTTTGCTTGTATCTGTATATGCTTGTGATATTTGCATTTGCAT 26 10307109 0.993419074 8 22 278 0.805555556 0.763427994 0.194444444 0.346153846 0.527777778 26 3 4 29 2R:10307089-10307145 8 JhI-1 FBtr0088360 10307028 10307304 TGATATTT 8mer-m1 dme-miR-283-5p 2R - 10307090 10307121 3'utr JhI-1 FlyBase G16459.1 ATCTGTATATGCTTGTGATATTTGCATTTGCA 15 10307109 0.675132212 6 13 142 0.857142857 0.653212514 0.19047619 0.333333333 0.523809524 15 0 3 18 2R:10307090-10307121 8 18.5 543 FBgn0028426 503.2766667 22.61333333 34.73333333 0.036759105 0.818101415 0.532629559 3 3 3 0.25 dme-miR-965-3p 8mer-A1 TACGCTTA 2R 10469472 10469479 + 2R_10469472_10469479_+ 0.624328119 0.613068332 0.618698226 0.007961881 CG11777 FBtr0088273 10469445 10469643 2R + 10469375 10469489 stop_codon CG11777 FlyBase G14666.1 AAGAACTATCGTCCCCATGTGGACAAGAAGATCAATGGAGTAACTATACATGCCAATCCTTTGGCGACGTGATAGAGATAGAGACAAAGGCCAATCGTACGCTTAAAATGAAATA 26 10469470 0.94123465 13 26 99 1 1.491361694 0.129032258 0.192307692 0.322580645 26 0 0 31 2R:10469375-10469489 8 CG11777 FBtr0088273 10469445 10469643 TACGCTTA 8mer-A1 dme-miR-965-3p 2R + 10469432 10469486 stop_codon CG11777 FlyBase G11166.1 CCTTTGGCGACGTGATAGAGATAGAGACAAAGGCCAATCGTACGCTTAAAATGAA 17 10469471 0.907770258 4 13 57 0.857142857 0.954242509 0.142857143 0.235294118 0.380952381 17 2 1 18 2R:10469432-10469486 8 8.5 544 FBgn0033527 170.1366667 31.64666667 48.74 0.049959836 0.268590689 0.174394748 2 1 1.5 0.25 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 10481832 10481839 + 2R_10481832_10481839_+ 0.579473312 0.511164785 0.545319049 0.048301404 CG17765 FBtr0088274 10481588 10481886 2R + 10481747 10481856 3'utr CG17765 FlyBase G14674.2 ATCACTCCACAGTCATATTGCAATCTCCTGGTATCAGAATCAAATTTCAAAAGTATTTGTTAACGCAGTTCGACTCAATAATCATAGTACAAAGTCTCTTGCGCCTAATA 47 10481830 0.979817235 12 44 323 0.948275862 1.740362689 0.103448276 0.191489362 0.344827586 47 3 0 55 2R:10481747-10481856 8 CG17765 FBtr0088274 10481588 10481886 AGTACAAA 8mer-A1 dme-miR-305-5p 2R + 10481660 10481855 3'utr CG17765 FlyBase G11170.1 ACAGCCAACAGTGGATGATCATAAATTTCGCGACTGGTGCATTTTTCTTAAATTTTCAACGGTGTTAGCTTTTTAATATGTAAATGAATCACTCCACAGTCATATTGCAATCTCCTGGTATCAGAATCAAATTTCAAAAGTATTTGTTAACGCAGTTCGACTCAATAATCATAGTACAAAGTCTCTTGCGCCTAAT 36 10481830 0.984866267 19 35 289 0.98 1.69019608 0.12 0.25 0.46 36 1 0 49 2R:10481660-10481855 8 22 545 FBgn0033529 2313.66 293.68 451.0566667 0.009508744 0.074911468 0.048774359 2 2 2 0.25 dme-miR-31a-5p 8mer-A1 TCTTGCCA 2R 10491536 10491543 - 2R_10491536_10491543_- 0.607257968 0.561754216 0.584506092 0.032176046 lola FBtr0089361 10491258 10491941 2R - 10491523 10491581 5'utr lola FlyBase G21738.1 TAGTTCTACTGTGGTTGGTGTTCTCAAAACTCAAATATTCTTGCCAGCAATTAGGGCTT 11 10491544 0.982935464 5 10 82 0.916666667 1.041392685 0.083333333 0.090909091 0.166666667 11 1 0 11 2R:10491523-10491581 8 lola FBtr0089361 10491258 10491941 TCTTGCCA 8mer-A1 dme-miR-31a-5p 2R - 10491534 10491578 5'utr lola FlyBase G16492.1 TTCTACTGTGGTTGGTGTTCTCAAAACTCAAATATTCTTGCCAGC 6 10491544 0.982279788 3 5 40 0.888888889 0.602059991 0 0.333333333 0.555555556 6 0 1 8 2R:10491534-10491578 8 5.5 546 FBgn0005630 6593.74 266.74 407.4566667 0.000834124 0.02061933 0.013498368 1 1 1 0.25 dme-bantam-3p 8mer-A1 TGATCTCA 2R 10496614 10496621 - 2R_10496614_10496621_- 0.593877753 0.599564594 0.596721173 0.004021175 lola FBtr0089360 10496293 10497178 2R - 10496594 10496646 5'utr lola FlyBase G21752.1 TGTATAAATCCTTAGGAAAACTCAATGATCTCAATGAACTTTTTCTTGATTTT 473 10496621 0.767112619 8 457 2259 0.964028777 1.72916479 0.215827338 0.150105708 0.276978417 473 11 9 536 2R:10496594-10496646 8 lola FBtr0089360 10496293 10497178 TGATCTCA 8mer-A1 dme-bantam-3p 2R - 10496595 10496650 5'utr lola FlyBase G16503.1 GATGTGTATAAATCCTTAGGAAAACTCAATGATCTCAATGAACTTTTTCTTGATTT 375 10496621 0.763432461 6 366 1827 0.97810219 2.030194785 0.260948905 0.309333333 0.527372263 375 8 4 536 2R:10496595-10496650 8 422.5 547 FBgn0005630 6593.74 266.74 407.4566667 0.064075927 1.583939417 1.036920081 0 0 0 0.25 dme-miR-282-5p 6mer2-7 GAGGCT 2R 10507648 10507653 - 2R_10507648_10507653_- 0.980376811 0.959418782 0.969897797 0.014819544 lola FBtr0343132|FBtr0089350 10507241|10507421 10508346|10508346 2R - 10507630 10507688 5'utr lola FlyBase G21774.1 AAAAATTGAAGAAAATTGTAAACTTATCTATATTGGAGGCTTGCAAAAATAATTTTGTA 106 10507655 0.982049653 8 104 801 0.985507246 2.133538908 0 0.283018868 0.449275362 106 2 0 136 2R:10507630-10507688 6 lola FBtr0089350|FBtr0343132 10507421|10507241 10508346|10508346 GAGGCT 6mer2-7 dme-miR-282-5p 2R - 10507625 10507671 5'utr lola FlyBase G16523.1 GTAAACTTATCTATATTGGAGGCTTGCAAAAATAATTTTGTAAGAAT 81 10507655 0.799882612 4 79 595 1 2.08278537 0.008264463 0.3875 0.595041322 80 0 0 121 2R:10507625-10507671 6 91 548 FBgn0005630 6593.74 266.74 407.4566667 0.013800969 0.341156182 0.223336633 2 2 2 0.25 dme-miR-2a-2-5p 6mer3-8 TGATGA 2R 10515463 10515468 - 2R_10515463_10515468_- 0.775614518 0.594671848 0.685143183 0.12794581 lola FBtr0089348 10515012 10515540 2R - 10515423 10515601 stop_codon lola FlyBase G21804.1 ACAAAGCTCCCACCTAAAGCGACACCTTGAGAGCGGTGTCTGTGTCAAATATTACTTATGAGATAATGTTTTCTTTAAAATCAAATAGAATAAGCGTTATCCCAATAGGCAGAAGATCAACTGATGATCGAAATGATGATCATGAAAATGAAGATGTAGAACATGAACAAGATTATATA 38 10515467 0.969055673 16 37 211 0.97826087 1.653212514 0.239130435 0.184210526 0.326086957 38 1 0 45 2R:10515423-10515601 6 lola FBtr0089348 10515012 10515540 TGATGA 6mer3-8 dme-miR-2a-2-5p 2R - 10515452 10515495 5'utr lola FlyBase G16540.1 AGGCAGAAGATCAACTGATGATCGAAATGATGATCATGAAAATG 6 10515467 0.944063275 3 6 26 1 0.954242509 0.333333333 0.333333333 0.555555556 6 0 0 9 2R:10515452-10515495 6 8 549 FBgn0005630 6593.74 266.74 407.4566667 0.001213272 0.029991752 0.01963399 -1 -1 -1 0.25 dme-miR-1003-3p 7mer-A1 TGTGAGA 2R 10615726 10615732 + 2R_10615726_10615732_+ 0.795477521 0.794398221 0.794937871 0.00076318 psq FBtr0088278|FBtr0346958|FBtr0088282|FBtr0330607|FBtr0100606|FBtr0088281|FBtr0088277|FBtr0088276|FBtr0088275|FBtr0100607|FBtr0088280|FBtr0088279 10614840|10614840|10614840|10615080|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840 10616248|10617280|10616248|10617280|10616248|10616248|10616248|10616248|10616248|10616248|10616248|10616248 2R + 10615703 10615790 3'utr psq FlyBase G14696.1 GCTTTGTTATAATTTTCGCTTAGTGTGAGACTGAAAGTGCGCCTAAAACTGTTGAAAAACCCCATGCCCAATATTATAGTGAAGACGC 377 10615728 0.968846894 15 358 2591 0.947867299 1.903089987 0.462085308 0.103448276 0.199052133 377 18 4 400 2R:10615703-10615790 7 psq FBtr0088275|FBtr0088280|FBtr0088277|FBtr0100607|FBtr0088276|FBtr0088279|FBtr0100606|FBtr0088281|FBtr0088278|FBtr0346958|FBtr0088282|FBtr0330607 10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10615080 10616248|10616248|10616248|10616248|10616248|10616248|10616248|10616248|10616248|10617280|10616248|10617280 TGTGAGA 7mer-A1 dme-miR-1003-3p 2R + 10615704 10615758 3'utr psq FlyBase G11187.1 CTTTGTTATAATTTTCGCTTAGTGTGAGACTGAAAGTGCGCCTAAAACTGTTGAA 196 10615728 0.846520173 10 175 1334 0.904761905 1.822821645 0.510204082 0.397959184 0.598639456 196 25 3 266 2R:10615704-10615758 7 267.5 550 FBgn0263102 4429.833333 90.05333333 137.5466667 0.060386019 2.970461948 1.944794494 -2 -2 -2 0.25 dme-miR-33-5p 7mer-A1 AATGCAA 2R 10616732 10616738 + 2R_10616732_10616738_+ 0.509986018 0.453095329 0.481540674 0.0402278 psq FBtr0346958|FBtr0330607 10614840|10615080 10617280|10617280 2R + 10616615 10616759 3'utr psq FlyBase G14703.1 ATACATTTGAATAGATTTTTTTAGTTGTTAGCTGACCTAGGGGAACAGGTATCTGAATATTATAAAAATCAAATGTTGCAAATTAATTTATTTTAGCGTTATAGACCCGTAGAACTGAATGCAATATGCTTACCTTAAAACTCAA 73 10616731 0.802353941 22 71 417 0.988764045 1.944482672 0.123595506 0.205479452 0.348314607 73 1 0 88 2R:10616615-10616759 7 psq FBtr0346958|FBtr0330607 10614840|10615080 10617280|10617280 AATGCAA 7mer-A1 dme-miR-33-5p 2R + 10616621 10616754 3'utr psq FlyBase G11192.1 TTGAATAGATTTTTTTAGTTGTTAGCTGACCTAGGGGAACAGGTATCTGAATATTATAAAAATCAAATGTTGCAAATTAATTTATTTTAGCGTTATAGACCCGTAGAACTGAATGCAATATGCTTACCTTAAAA 67 10616732 0.971410383 18 62 370 0.923913043 1.929418926 0.195652174 0.28358209 0.47826087 67 7 0 85 2R:10616621-10616754 7 51.5 551 FBgn0263102 4429.833333 90.05333333 137.5466667 0.01162572 0.571883328 0.374418379 1 0 0.5 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 10640620 10640627 + 2R_10640620_10640627_+ 0.624184232 0.522799617 0.573491924 0.071689738 CG11883 FBtr0113063|FBtr0339461|FBtr0088283 10640587|10640587|10640587 10640990|10641807|10640990 2R + 10640566 10640634 stop_codon CG11883 FlyBase G14707.1 TCACCGAAGCTGAGGACGAGTAAAGAACTACCAAAAGTCATTTGATTTACAATTTGCATTTAATTTATT 13 10640619 0.987557989 5 12 103 0.9375 1.176091259 0 0.230769231 0.375 13 1 0 15 2R:10640566-10640634 8 CG11883 FBtr0088283|FBtr0339461|FBtr0113063 10640587|10640587|10640587 10640990|10641807|10640990 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 10640558 10640631 stop_codon CG11883 FlyBase G11194.1 TTCCACAATCACCGAAGCTGAGGACGAGTAAAGAACTACCAAAAGTCATTTGATTTACAATTTGCATTTAATTT 8 10640594 0.979241583 5 8 51 1 1.041392685 0 0.375 0.545454545 8 0 0 11 2R:10640558-10640631 8 5 552 FBgn0033538 276.0933333 9.15 14.24666667 0.018109818 0.546448087 0.350959289 1 26 13.5 0.25 dme-miR-34-5p 6mer2-7 ACTGCC 2R 10737392 10737397 + 2R_10737392_10737397_+ 0.917995729 0.897288815 0.907642272 0.014641989 CG7220 FBtr0088216|FBtr0088217|FBtr0339465|FBtr0088219 10737369|10737369|10737369|10737369 10738370|10738370|10738370|10738370 2R + 10737378 10737432 5'utr-coding CG7220 FlyBase G14718.1 TGCCATTTACTAATACTGCCTGCTATTGTTTGCTTTGCGCATCCAACCAAAAAAA 15 10737391 0.988080887 6 14 139 0.863636364 0.67669361 0.045454545 0.2 0.454545455 15 0 3 19 2R:10737378-10737432 6 CG7220 FBtr0339465|FBtr0088219|FBtr0088216|FBtr0088217 10737369|10737369|10737369|10737369 10738370|10738370|10738370|10738370 ACTGCC 6mer2-7 dme-miR-34-5p 2R + 10737363 10737424 stop_codon CG7220 FlyBase G11200.1 CTGTTTAGTTAAAATTGCCATTTACTAATACTGCCTGCTATTGTTTGCTTTGCGCATCCAAC 10 10737390 0.986760763 7 10 90 1 1.176091259 0 0.3 0.533333333 10 0 0 15 2R:10737363-10737424 6 10 553 FBgn0033544 368.3233333 29.77 45.41666667 0.027150058 0.335908633 0.220183486 1 2 1.5 0.25 dme-miR-965-3p 7mer-A1 ACGCTTA 2R 10738705 10738711 - 2R_10738705_10738711_- 0.82332159 0.823082983 0.823202287 0.000168716 Mat1 FBtr0088255 10738615 10738757 2R - 10738666 10738747 3'utr Mat1 FlyBase G21856.1 AAATATCCTTTAATGGTCGCACAACCAGAGCACTGAACGCTTAATTTTGTTGAACAAATGTGTCCTATACGAATCCATTCAG 53 10738703 0.967739616 10 51 303 0.95 1.755874856 0.116666667 0.113207547 0.216666667 53 3 0 57 2R:10738666-10738747 7 Mat1 FBtr0088255 10738615 10738757 ACGCTTA 7mer-A1 dme-miR-965-3p 2R - 10738625 10738736 3'utr Mat1 FlyBase G16585.1 AATGGTCGCACAACCAGAGCACTGAACGCTTAATTTTGTTGAACAAATGTGTCCTATACGAATCCATTCAGTTAACTCGTAACTTAATATATGTTAAATAAATAAATGCTAT 54 10738703 0.760862295 14 53 312 0.987951807 1.612783857 0.048192771 0.37037037 0.590361446 54 0 1 82 2R:10738625-10738736 7 43 554 FBgn0024956 305.3266667 31.30333333 48.17 0.140832769 1.373655628 0.892671787 -8 -8 -8 0.25 dme-miR-283-5p 8mer-m1 TGATATTT 2R 10740761 10740768 - 2R_10740761_10740768_- 0.523939816 0.532047581 0.527993699 0.00573308 CG33144 FBtr0088254|FBtr0302517 10740394|10740052 10740928|10740928 2R - 10740705 10740808 3'utr CG33144 FlyBase G21864.1 AGTTATTACAATTATAATTGTATATGTGTTAACTAAATTGTGATATTTACAGTGATTCGATTTCTAATTGAATCGACAAATTTGTTGAGAACCTATACAAAGAC 118 10740771 0.99070226 17 110 1145 0.946666667 1.45331834 0.573333333 0.220338983 0.386666667 118 4 4 142 2R:10740705-10740808 8 CG33144 FBtr0302517|FBtr0088254 10740052|10740394 10740928|10740928 TGATATTT 8mer-m1 dme-miR-283-5p 2R - 10740732 10740882 3'utr CG33144 FlyBase G16590.1 AGCCTGTAAATGCAGCTGCTGTAATTACTGGTAGTTTCTATTGTTAATGACGACAGCTTACGTACATTTATTTTAGTTATTACAATTATAATTGTATATGTGTTAACTAAATTGTGATATTTACAGTGATTCGATTTCTAATTGAATCGAC 94 10740771 0.990140207 20 90 895 0.950704225 2.130333768 0.521126761 0.361702128 0.577464789 94 7 0 135 2R:10740732-10740882 8 95 555 FBgn0053144 479.6233333 12.36 18.86333333 0.198072098 7.686084142 5.036225482 3 3 3 0.25 dme-bantam-3p 6mer3-8 TGATCT 2R 10815752 10815757 + 2R_10815752_10815757_+ 0.905266304 0.933224415 0.919245359 0.019769362 CG7222 FBtr0088223|FBtr0345945 10815109|10815109 10815781|10815781 2R + 10815711 10815807 3'utr CG7222 FlyBase G14735.1 ATACAGAGTTCATAAGCCGCATGTCTATCAAAACACCAAAATGATCTGTTATCAATAAATATATGTACTTGACATTCTGATATTTACACATGCATAA 282 10815752 0.908737901 17 275 1699 0.973529412 2.042706739 0.017647059 0.187943262 0.326470588 282 7 2 331 2R:10815711-10815807 6 CG7222 FBtr0088223|FBtr0345945 10815109|10815109 10815781|10815781 TGATCT 6mer3-8 dme-bantam-3p 2R + 10815729 10815797 3'utr CG7222 FlyBase G11215.1 GCATGTCTATCAAAACACCAAAATGATCTGTTATCAATAAATATATGTACTTGACATTCTGATATTTAC 149 10815752 0.899534462 9 144 862 0.958333333 2.315970345 0.009259259 0.33557047 0.541666667 149 9 0 207 2R:10815729-10815797 6 199 556 FBgn0033551 801.0633333 64.22666667 98.17333333 0.248419809 3.098401495 2.027027027 0 0 0 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 10839439 10839444 - 2R_10839439_10839444_- 0.755267633 0.752487342 0.753877488 0.001965969 CG30015 FBtr0113357|FBtr0113357|FBtr0113357|FBtr0306393|FBtr0306393|FBtr0306393|FBtr0331939|FBtr0331939|FBtr0331939|FBtr0088243|FBtr0088243|FBtr0088243|FBtr0113356|FBtr0113356|FBtr0113356|FBtr0331938|FBtr0331938|FBtr0331938|FBtr0088242|FBtr0088242|FBtr0088242 10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100 10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902 2R - 10839314 10839518 3'utr CG30015 FlyBase G21898.1 CTGTGCATGTCGAAAAATGTTTTGAAATAAACTAAATTACGTCTATTAATTGAGAGTCAAGAAAACTGTAAGGACTGTGAGTATAATTACGCGTAGCAAGGAGCCTGATATTCGAAACATTTGATTTACTTTAAGTTGATAATTTGCAAGCTTTTAATTGGTAGAAGAGATTGATTTTACTATTTAGACTAACTATTATTACTTA 61 10839451 0.980851047 19 54 398 0.918918919 1.531478917 0.202702703 0.163934426 0.310810811 61 5 1 68 2R:10839314-10839518 6 CG30015 FBtr0331939|FBtr0331939|FBtr0331939|FBtr0306393|FBtr0306393|FBtr0306393|FBtr0113357|FBtr0113357|FBtr0113357|FBtr0088242|FBtr0088242|FBtr0088242|FBtr0331938|FBtr0331938|FBtr0331938|FBtr0113356|FBtr0113356|FBtr0113356|FBtr0088243|FBtr0088243|FBtr0088243 10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100|10839100 10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902|10839902 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 10839349 10839480 3'utr CG30015 FlyBase G16612.1 ACGTCTATTAATTGAGAGTCAAGAAAACTGTAAGGACTGTGAGTATAATTACGCGTAGCAAGGAGCCTGATATTCGAAACATTTGATTTACTTTAAGTTGATAATTTGCAAGCTTTTAATTGGTAGAAGAGA 45 10839441 0.971497802 14 38 236 0.884057971 1.484299839 0.202898551 0.422222222 0.623188406 45 7 1 61 2R:10839349-10839480 6 31.5 557 FBgn0050015 810.93 16.1 24.71 0.03884429 1.956521739 1.274787535 7 -3 2 0.25 dme-miR-307a-3p 7mer-A1 GTTGTGA 2R 10892582 10892588 + 2R_10892582_10892588_+ 0.822234108 0.777659131 0.799946619 0.031519285 CG30020 FBtr0088235|FBtr0339521 10892557|10892557 10893191|10892787 2R + 10892544 10892592 stop_codon CG30020 FlyBase G14783.1 AATGGGCAGCCCTAAGGAGCTGACGATAATTCCAAGTAGTTGTGAACTT 6 10892572 0.971432831 4 6 35 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2R:10892544-10892592 7 CG30020 FBtr0339521|FBtr0088235 10892557|10892557 10892787|10893191 GTTGTGA 7mer-A1 dme-miR-307a-3p 2R + 10892558 10892593 3'utr CG30020 FlyBase G11252.1 AGGAGCTGACGATAATTCCAAGTAGTTGTGAACTTA 7 10892573 0.984597105 4 5 44 0.705882353 0.602059991 0.117647059 1 1 7 3 2 12 2R:10892558-10892593 7 5.5 558 FBgn0050020 876.3433333 22.63666667 34.61333333 0.006276079 0.242968635 0.158898305 10 9 9.5 0.25 dme-miR-970-3p 6mer3-8 TCTTAT 2R 10892735 10892740 + 2R_10892735_10892740_+ 0.858669361 0.87769082 0.86818009 0.013450161 CG30020 FBtr0088235|FBtr0339521 10892557|10892557 10893191|10892787 2R + 10892698 10892750 3'utr CG30020 FlyBase G14785.1 TCTTGTTAAGTTCTAGACTAGGACATTAAACACAATCTCTTATACAAAATTAG 23 10892737 0.970543825 3 22 155 0.9375 1 0.03125 0.217391304 0.4375 23 0 2 30 2R:10892698-10892750 6 CG30020 FBtr0339521|FBtr0088235 10892557|10892557 10892787|10893191 TCTTAT 6mer3-8 dme-miR-970-3p 2R + 10892706 10892754 3'utr CG30020 FlyBase G11254.1 AGTTCTAGACTAGGACATTAAACACAATCTCTTATACAAAATTAGTTGA 19 10892737 0.685025049 5 19 129 1 1.397940009 0.04 0.210526316 0.4 19 0 0 25 2R:10892706-10892754 6 20.5 559 FBgn0050020 876.3433333 22.63666667 34.61333333 0.023392658 0.905610367 0.592257319 -2 -2 -2 0.25 dme-miR-34-5p 8mer-A1 CACTGCCA 2R 10982737 10982744 - 2R_10982737_10982744_- 0.67817514 0.678205618 0.678190379 2.16E-05 luna FBtr0333066 10977954 10983297 2R - 10982717 10982767 3'utr luna FlyBase G21935.1 TTAATAATAATTTTGTTTTCATACACTGCCAAAATGAAAATGTAAAAAAAG 35 10982747 0.792800699 7 33 279 0.952380952 1.602059991 0.214285714 0.2 0.333333333 35 2 0 40 2R:10982717-10982767 8 luna FBtr0333066 10977954 10983297 CACTGCCA 8mer-A1 dme-miR-34-5p 2R - 10982726 10982762 3'utr luna FlyBase G16633.1 AATAATTTTGTTTTCATACACTGCCAAAATGAAAATG 24 10982747 0.750660855 7 24 161 1 1.505149978 0.5 0.291666667 0.46875 24 0 0 32 2R:10982726-10982762 8 29 560 FBgn0040765 1623.386667 50.45666667 77.46666667 0.017863889 0.574750611 0.374354561 3 3 3 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2R 10982848 10982854 - 2R_10982848_10982854_- 0.671573229 0.659708509 0.665640869 0.00838961 luna FBtr0333066|FBtr0088210|FBtr0345675 10977954|10982792|10982792 10983297|10983297|10983297 2R - 10982829 10982879 3'utr luna FlyBase G21936.1 AAACAGCAAAAATTGTGTACAATTTACCAAAGCTAAGCTGATTTCTTTAAT 20 10982855 0.946450111 4 17 119 0.92 1.361727836 0.36 0.2 0.36 20 2 0 23 2R:10982829-10982879 7 luna FBtr0333066|FBtr0088210|FBtr0345675 10977954|10982792|10982792 10983297|10983297|10983297 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 10982834 10982868 3'utr luna FlyBase G16634.1 ATTGTGTACAATTTACCAAAGCTAAGCTGATTTCT 10 10982855 0.676690805 5 9 63 0.923076923 1.079181246 0.538461538 0.3 0.461538462 10 1 0 12 2R:10982834-10982868 7 14.5 561 FBgn0040765 1623.386667 50.45666667 77.46666667 0.008931945 0.287375306 0.187177281 1 1 1 0.25 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 1120763 1120769 + 2R_1120763_1120769_+ 0.654007653 0.661689141 0.657848397 0.00543157 rl FBtr0329920|FBtr0113700|FBtr0113702|FBtr0329919|FBtr0113703 1120749|1120749|1120749|1120749|1120749 1125927|1121107|1121107|1121771|1121107 2R + 1120739 1120786 stop_codon rl FlyBase G12499.1 AATGCGCCTTAAGAATGCGCTGTAAGCTTTAAGAATTTGAGTATATAG 13 1120761 0.984171241 3 10 85 0.888888889 1.204119983 0.222222222 0.230769231 0.444444444 13 2 0 16 2R:1120739-1120786 7 rl FBtr0113702|FBtr0329919|FBtr0329920|FBtr0113700|FBtr0113703 1120749|1120749|1120749|1120749|1120749 1121107|1121771|1125927|1121107|1121107 AGCTTTA 7mer-A1 dme-miR-79-3p 2R + 1120749 1120773 stop_codon rl FlyBase G9573.1 AAGAATGCGCTGTAAGCTTTAAGAA 6 1120761 0.714694217 2 6 30 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2R:1120749-1120773 7 9 562 FBgn0003256 2023.603333 112.5466667 172.76 0.004447512 0.079966829 0.052095392 2 2 2 0.25 dme-miR-11-3p 7mer-m1 TGTGATG 2R 1120957 1120963 + 2R_1120957_1120963_+ 0.551194638 0.568079864 0.559637251 0.01193971 rl FBtr0329920|FBtr0113700|FBtr0113702|FBtr0329919|FBtr0113703 1120749|1120749|1120749|1120749|1120749 1125927|1121107|1121107|1121771|1121107 2R + 1120938 1120971 3'utr rl FlyBase G12500.1 GATAGGAACTTAAACTATGTGTGATGTTCGTAAA 8 1120955 0.741348628 2 7 67 0.888888889 0.903089987 0.111111111 0.125 0.222222222 8 1 0 8 2R:1120938-1120971 7 rl FBtr0113702|FBtr0329919|FBtr0329920|FBtr0113700|FBtr0113703 1120749|1120749|1120749|1120749|1120749 1121107|1121771|1125927|1121107|1121107 TGTGATG 7mer-m1 dme-miR-11-3p 2R + 1120936 1120968 3'utr rl FlyBase G9575.1 AAGATAGGAACTTAAACTATGTGTGATGTTCGT 6 1120955 0.936099245 2 6 48 1 1.041392685 0.363636364 0.5 0.727272727 6 0 0 11 2R:1120936-1120968 7 7 563 FBgn0003256 2023.603333 112.5466667 172.76 0.003459176 0.062196422 0.040518639 2 2 2 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 11216752 11216757 + 2R_11216752_11216757_+ 0.710591484 0.71637556 0.713483522 0.004089976 shn FBtr0330620|FBtr0330620|FBtr0330620|FBtr0330619|FBtr0330619|FBtr0330619|FBtr0088100|FBtr0088100|FBtr0088100|FBtr0088099|FBtr0088099|FBtr0088099|FBtr0088098|FBtr0088098|FBtr0088098|FBtr0088101|FBtr0088101|FBtr0088101 11216243|11216243|11216243|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213 11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394 2R + 11216657 11216779 3'utr shn FlyBase G14854.2 GCCAACCAACGAGCACACTTATAAATCTATCTATATTGTATACACTTAACCATAATTTGTTTTCGAAATGCATAAATGCAAAAACTCCTGAAGTGCTGTGAGTCTATCTACAAATGTAAAGAT 118 11216750 0.783147818 17 101 729 0.874074074 1.469822016 0.125925926 0.13559322 0.244444444 118 14 3 118 2R:11216657-11216779 6 shn FBtr0088098|FBtr0088098|FBtr0088098|FBtr0088101|FBtr0088101|FBtr0088101|FBtr0088100|FBtr0088100|FBtr0088100|FBtr0088099|FBtr0088099|FBtr0088099|FBtr0330620|FBtr0330620|FBtr0330620|FBtr0330619|FBtr0330619|FBtr0330619 11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216243|11216243|11216243|11216213|11216213|11216213 11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 11216665 11216846 3'utr shn FlyBase G11299.2 ACGAGCACACTTATAAATCTATCTATATTGTATACACTTAACCATAATTTGTTTTCGAAATGCATAAATGCAAAAACTCCTGAAGTGCTGTGAGTCTATCTACAAATGTAAAGATCCGAGAGCGAGAGAAGTGTGTTATTTTTAAGGCCTAGCCCCGAAAATGAACCTCCAAACCGAACCAG 98 11216748 0.97152353 23 90 618 0.921052632 1.447158031 0.125 0.387755102 0.605263158 98 8 4 140 2R:11216665-11216846 6 72.5 564 FBgn0003396 1305.2 16.31666667 25.01 0.055547043 4.443309499 2.898840464 2 4 3 0.25 dme-bantam-3p 6mer3-8 TGATCT 2R 11217302 11217307 + 2R_11217302_11217307_+ 0.999847712 0.999126637 0.999487175 0.000509895 shn FBtr0330620|FBtr0330619|FBtr0088100|FBtr0088099|FBtr0088098|FBtr0088101 11216243|11216213|11216213|11216213|11216213|11216213 11217394|11217394|11217394|11217394|11217394|11217394 2R + 11217279 11217329 3'utr shn FlyBase G14859.1 GGTTAAACAACAAGAAAATGAAGTGATCTATTACATTATTGTAAAATATAT 123 11217307 0.973741087 8 122 748 0.987096774 2.184691431 0.006451613 0.203252033 0.367741935 123 2 0 153 2R:11217279-11217329 6 shn FBtr0088098|FBtr0088101|FBtr0088100|FBtr0088099|FBtr0330620|FBtr0330619 11216213|11216213|11216213|11216213|11216243|11216213 11217394|11217394|11217394|11217394|11217394|11217394 TGATCT 6mer3-8 dme-bantam-3p 2R + 11217277 11217332 3'utr shn FlyBase G11305.1 GTGGTTAAACAACAAGAAAATGAAGTGATCTATTACATTATTGTAAAATATATCAA 99 11217297 0.978344205 10 94 629 0.96350365 1.643452676 0.04379562 0.313131313 0.503649635 99 3 2 132 2R:11217277-11217332 6 110.5 565 FBgn0003396 1305.2 16.31666667 25.01 0.084661355 6.772216547 4.418232707 -5 5 0 0.25 dme-miR-11-3p 7mer-m1 TGTGATG 2R 1125300 1125306 + 2R_1125300_1125306_+ 0.606152768 0.608577662 0.607365215 0.001714663 rl FBtr0329920|FBtr0345337 1120749|1125087 1125927|1125927 2R + 1125279 1125323 3'utr rl FlyBase G12503.1 AAGATAGGAACTTAAACTATGTGTGATGTTCGTAAAATGCAAAAC 12 1125298 0.689931011 3 12 94 1 1.146128036 0.357142857 0.166666667 0.285714286 12 0 0 14 2R:1125279-1125323 7 rl FBtr0329920|FBtr0345337 1120749|1125087 1125927|1125927 TGTGATG 7mer-m1 dme-miR-11-3p 2R + 1125279 1125322 3'utr rl FlyBase G9578.1 AAGATAGGAACTTAAACTATGTGTGATGTTCGTAAAATGCAAAA 9 1125298 0.90930168 4 9 78 1 1.146128036 0.357142857 0.444444444 0.642857143 9 0 0 14 2R:1125279-1125322 7 10.5 566 FBgn0003256 2023.603333 112.5466667 172.76 0.005188764 0.093294633 0.060777958 2 2 2 0.25 dme-miR-33-5p 8mer-A1 CAATGCAA 2R 11280594 11280601 - 2R_11280594_11280601_- 0.577048085 0.602469295 0.58975869 0.017975503 CG9062 FBtr0088181|FBtr0332422 11280482|11280482 11281265|11281106 2R - 11280579 11280650 3'utr CG9062 FlyBase G21953.1 ACATAGAACATACATAGGTATAAGAAATCTGTTAAATATACAGAAAAATCAATGCAATGGTAGTAGCCCAAC 60 11280602 0.944405863 4 58 255 0.985507246 1.832508913 0.057971014 0.133333333 0.246376812 60 1 0 68 2R:11280579-11280650 8 CG9062 FBtr0088181|FBtr0332422 11280482|11280482 11281265|11281106 CAATGCAA 8mer-A1 dme-miR-33-5p 2R - 11280552 11280626 3'utr CG9062 FlyBase G16646.1 AAATCTGTTAAATATACAGAAAAATCAATGCAATGGTAGTAGCCCAACTTGTAAAGAGCTCTATGCAAGCCAATT 50 11280602 0.945504715 6 48 201 0.95890411 1.84509804 0.054794521 0.32 0.534246575 50 3 0 70 2R:11280552-11280626 8 52 567 FBgn0033607 376.12 15.09333333 23.24 0.138253749 3.445229682 2.237521515 1 1 1 0.25 dme-miR-252-5p 6mer3-8 GTACTT 2R 11280832 11280837 - 2R_11280832_11280837_- 0.999446144 0.999901082 0.999673613 0.000321734 CG9062 FBtr0088181|FBtr0332422 11280482|11280482 11281265|11281106 2R - 11280690 11280854 3'utr CG9062 FlyBase G21954.1 TCGTTAGGAATAAATATGTACTTCAGATTCAGACTTATAACAATTAGGCTTGCGACACACGTAGATAAGCATTGCAAAGGAGTAACTGCAGACATACCATTAAATCGTATTTGCATCTGAAGCAACTAGACCTAGAGTATTGCGCATATATGTATGTATGTAATA 26 11280838 0.976936123 13 24 165 0.96875 1.190331698 0.1875 0.153846154 0.3125 26 0 1 31 2R:11280690-11280854 6 CG9062 FBtr0088181|FBtr0332422 11280482|11280482 11281265|11281106 GTACTT 6mer3-8 dme-miR-252-5p 2R - 11280798 11280873 3'utr CG9062 FlyBase G16647.1 ACTTTTGTTTGTTCACTTCTCGTTAGGAATAAATATGTACTTCAGATTCAGACTTATAACAATTAGGCTTGCGACA 12 11280827 0.799257652 8 11 92 0.941176471 0.903089987 0.058823529 0.333333333 0.529411765 12 0 1 16 2R:11280798-11280873 6 8.5 568 FBgn0033607 376.12 15.09333333 23.24 0.02259917 0.563162544 0.365748709 1 -10 -4.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2R 11309690 11309696 + 2R_11309690_11309696_+ 0.52111025 0.531435974 0.526273112 0.007301443 CG7745 FBtr0088119 11309524 11309829 2R + 11309671 11309717 3'utr CG7745 FlyBase G14891.1 CGAACACTTTTCAAATGTGCTAGTCAAGACCAGCAATTGGGATTCCA 18 11309687 0.971601645 3 18 108 1 1.322219295 0.238095238 0.166666667 0.285714286 18 0 0 21 2R:11309671-11309717 7 CG7745 FBtr0088119 11309524 11309829 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R + 11309644 11309704 3'utr CG7745 FlyBase G11325.1 AGTCATTTGCAAAGCTCTACGTTCTACCGAACACTTTTCAAATGTGCTAGTCAAGACCAGC 10 11309687 0.9763679 4 10 66 1 1.146128036 0.214285714 0.3 0.5 10 0 0 14 2R:11309644-11309704 7 13.5 569 FBgn0033616 171.0033333 10.95666667 16.76333333 0.07894583 1.232126559 0.805329091 3 3 3 0.25 dme-miR-282-5p 6mer3-8 AGAGGC 2R 11462912 11462917 + 2R_11462912_11462917_+ 0.624669172 0.755758043 0.690213607 0.092693779 E(Pc) FBtr0330622|FBtr0330621|FBtr0088140|FBtr0088139|FBtr0330623 11461842|11461812|11461812|11461812|11461842 11464030|11465270|11464030|11464030|11465270 2R + 11462898 11462933 3'utr E(Pc) FlyBase G14939.1 AGGAATGGAACTTCAGAGGCAACTGATCTGAGAGAG 5 11462923 0.866889009 3 5 16 1 0.77815125 0.833333333 0.2 0.333333333 5 0 0 6 2R:11462898-11462933 6 E(Pc) FBtr0330623|FBtr0088139|FBtr0088140|FBtr0330621|FBtr0330622 11461842|11461812|11461812|11461812|11461842 11465270|11464030|11464030|11465270|11464030 AGAGGC 6mer3-8 dme-miR-282-5p 2R + 11462890 11462965 3'utr E(Pc) FlyBase G11353.1 TTTAACTAAGGAATGGAACTTCAGAGGCAACTGATCTGAGAGAGATGTAGGGAGTTGCAGAAGAAAACTACTATTG 15 11462924 0.973128488 7 10 64 0.833333333 1 0.291666667 0.466666667 0.666666667 15 3 1 20 2R:11462890-11462965 6 7 570 FBgn0000581 1705.15 21.49666667 32.99 0.004105211 0.325631881 0.212185511 -11 -12 -11.5 0.25 dme-miR-252-5p 7mer-m8 GTACTTA 2R 11579041 11579047 - 2R_11579041_11579047_- 0.579568244 0.581193767 0.580381005 0.001149473 tou FBtr0333070|FBtr0113066|FBtr0088091|FBtr0333071 11577483|11578878|11578878|11578878 11579826|11579826|11579826|11579826 2R - 11578989 11579093 3'utr tou FlyBase G22043.1 TTTTAAGCACCAACGAAGCGCTCATTTAAGTTTTAAAGTGTATTTTGTACTTATAGCAACTCCGAAATCTGTATTTAAACGTATTATAACAAGTGCTAACAGTTG 46 11579048 0.98838123 10 42 389 0.918032787 1.447158031 0.131147541 0.260869565 0.442622951 46 4 1 56 2R:11578989-11579093 7 tou FBtr0333071|FBtr0113066|FBtr0088091|FBtr0333070 11578878|11578878|11578878|11577483 11579826|11579826|11579826|11579826 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 11578901 11579281 3'utr tou FlyBase G16721.1 AAGAAGCCATCTACAGTAGACGCCCGGACTGGATGAACGCTGACAAATGACAAATGAACACGTACAAAAACTGTCTACCAATTTCCGATCCGATCGATCGATCCATCGTTTGAACAGTATTTTGTGCACAAAGCCGCGTCGCTTTATTTTCTACACTTACAATTCGAACCCTAATTTTAACAACTATTTTTTAAGCACCAACGAAGCGCTCATTTAAGTTTTAAAGTGTATTTTGTACTTATAGCAACTCCGAAATCTGTATTTAAACGTATTATAACAAGTGCTAACAGTTGCCCAGGCAAAAATGCGAACAATTATACTCAAAAAGGCGGTGCGAGGAGGACTTGTAAATGTAAATGAAAGCAAATTAAAATTAAATGT 124 11579048 0.977775772 39 120 793 0.971590909 2.23299611 0.181818182 0.298387097 0.505681818 124 5 0 171 2R:11578901-11579281 7 24 571 FBgn0033636 2664.063333 30.46 46.92333333 0.009008795 0.787918582 0.511472615 1 1 1 0.25 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 2R 11619646 11619652 - 2R_11619646_11619652_- 0.821492412 0.82135116 0.821421786 9.98E-05 CG9005 FBtr0300945 11619477 11620844 2R - 11619612 11619665 3'utr CG9005 FlyBase G22107.1 ATTTTCCAATTGATACCTGACTATAACTATTGTATAACAACGTACTACACAGCT 12 11619656 0.989233326 7 10 97 0.857142857 1.079181246 0.071428571 0.166666667 0.285714286 12 2 0 12 2R:11619612-11619665 7 CG9005 FBtr0300945 11619477 11620844 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2R - 11619614 11619665 3'utr CG9005 FlyBase G16756.1 ATTTTCCAATTGATACCTGACTATAACTATTGTATAACAACGTACTACACAG 7 11619655 0.99192614 5 5 46 0.714285714 0.698970004 0.142857143 0 0 7 2 0 5 2R:11619614-11619665 7 7.5 572 FBgn0033638 313.34 6.546666667 10.11333333 0.023935661 1.145621181 0.741595254 4 3 3.5 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 2R 11642877 11642883 - 2R_11642877_11642883_- 0.496296163 0.50562717 0.500961667 0.006598013 CG9003 FBtr0330632|FBtr0330634|FBtr0113069|FBtr0113068|FBtr0330633|FBtr0088088|FBtr0113067 11642266|11641475|11642266|11642266|11642266|11642266|11641475 11643134|11643188|11643188|11643188|11643134|11643188|11643188 2R - 11642747 11642910 3'utr CG9003 FlyBase G22136.1 AAAAACTCGCAGAAACCAGCATCAAATTGTGATTATTTTATTTACTATGCTACGTTATCTAGACCCTCACTTGTGTAAACTGTATTAGCGCCCACACTCTGTTTGTTATTAACTGCAGCCCGATGAATTGCTAGCTTATATAGATCTGTATATATACATATATG 302 11642884 0.862518302 25 293 2501 0.962962963 1.812913357 0.054320988 0.268211921 0.454320988 302 10 5 390 2R:11642747-11642910 7 CG9003 FBtr0088088|FBtr0113067|FBtr0113068|FBtr0330633|FBtr0113069|FBtr0330632|FBtr0330634 11642266|11641475|11642266|11642266|11642266|11642266|11641475 11643188|11643188|11643188|11643134|11643188|11643134|11643188 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 11642864 11642911 3'utr CG9003 FlyBase G16782.1 CAAAAACTCGCAGAAACCAGCATCAAATTGTGATTATTTTATTTACTA 173 11642884 0.987401994 10 162 1437 0.9437751 1.525969822 0.048192771 0.312138728 0.522088353 173 8 6 235 2R:11642864-11642911 7 220 573 FBgn0033639 532.1833333 18.93 29.13 0.413391375 11.6217644 7.552351528 1 1 1 0.25 dme-miR-305-5p 7mer-A1 GTACAAA 2R 11688610 11688616 - 2R_11688610_11688616_- 0.779700519 0.732739085 0.756219802 0.033206724 wal FBtr0088083 11688567 11689078 2R - 11688604 11688636 3'utr wal FlyBase G22155.1 TGTGAAAATGTGAAAACTGTGTACAAAAAAAGA 7 11688619 0.877184095 5 7 27 1 1 0.7 0.285714286 0.5 7 0 0 10 2R:11688604-11688636 7 wal FBtr0088083 11688567 11689078 GTACAAA 7mer-A1 dme-miR-305-5p 2R - 11688591 11688638 3'utr wal FlyBase G16798.1 AGTGTGAAAATGTGAAAACTGTGTACAAAAAAAGATTATAGATCAAAT 8 11688619 0.912093297 3 8 31 1 1.079181246 0.583333333 0.375 0.583333333 8 0 0 12 2R:11688591-11688638 7 6.5 574 FBgn0010516 627.3333333 62.66 95.9 0.010361318 0.10373444 0.067778936 3 3 3 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 11689014 11689021 - 2R_11689014_11689021_- 0.554197433 0.574092939 0.564145186 0.014068243 wal FBtr0088083 11688567 11689078 2R - 11688990 11689087 stop_codon wal FlyBase G22158.1 AAGTTGTAAGGCGAGATTGTCACTTGCTGTAGTATAAAGATTGTGTACCGATGAATTGATAACTGTTGCATTTATTTGAATTTTGACATAAGTCCGTG 349 11689022 0.989842041 22 338 3491 0.966292135 1.934498451 0.359550562 0.212034384 0.382022472 349 11 4 430 2R:11688990-11689087 8 wal FBtr0088083|FBtr0088082 11688567|11688934 11689078|11689078 TGCATTTA 8mer-A1 dme-miR-277-3p 2R - 11688971 11689087 stop_codon wal FlyBase G16801.1 AAGTTGTAAGGCGAGATTGTCACTTGCTGTAGTATAAAGATTGTGTACCGATGAATTGATAACTGTTGCATTTATTTGAATTTTGACATAAGTCCGTGGAAGATTTTCCCTTAAATT 254 11689022 0.991362397 22 243 2604 0.960106383 1.858537198 0.29787234 0.374015748 0.57712766 254 11 4 361 2R:11688971-11689087 8 275 575 FBgn0010516 627.3333333 62.66 95.9 0.438363443 4.388764762 2.867570386 1 1 1 0.25 dme-miR-980-3p 7mer-A1 GCAGCTA 2R 11826991 11826997 + 2R_11826991_11826997_+ 0.597497272 0.665262112 0.631379692 0.04791695 CG13192 FBtr0088031 11826796 11827097 2R + 11826972 11827037 3'utr CG13192 FlyBase G14964.1 AATTAAAGGGCTTGGCAATGCAGCTATTTGTTACTTAGATGAACTTTGACCACCCTTGAAAAAGAA 32 11826990 0.835183514 10 28 216 0.888888889 1.204119983 0.25 0.09375 0.194444444 32 3 1 32 2R:11826972-11827037 7 CG13192 FBtr0088031 11826796 11827097 GCAGCTA 7mer-A1 dme-miR-980-3p 2R + 11826976 11827029 3'utr CG13192 FlyBase G11369.1 AAAGGGCTTGGCAATGCAGCTATTTGTTACTTAGATGAACTTTGACCACCCTTG 16 11826990 0.835828957 7 15 104 0.884615385 0.759667845 0.461538462 0.5 0.692307692 16 0 3 23 2R:11826976-11827029 7 18 576 FBgn0033653 156.6666667 14.10333333 21.37666667 0.114893617 1.27629402 0.842039607 1 1 1 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 11901057 11901064 + 2R_11901057_11901064_+ 0.424340303 0.440977092 0.432658698 0.011763994 Zip48C FBtr0088038 11900986 11901394 2R + 11901028 11901122 3'utr Zip48C FlyBase G15003.1 AATCTAGTGCTAAACTCAAAGATTCCACTGTACTTAACGCAAAACTCTGCTGTCTTGTAAATAGAAGCATGCTGTGTACAAATCTCAGAACCAGC 26 11901056 0.975057564 6 22 139 0.848484848 0.84509804 0.03030303 0.230769231 0.393939394 26 2 3 28 2R:11901028-11901122 8 Zip48C FBtr0088038 11900986 11901394 GTACTTAA 8mer-A1 dme-miR-252-5p 2R + 11901031 11901083 3'utr Zip48C FlyBase G11397.1 CTAGTGCTAAACTCAAAGATTCCACTGTACTTAACGCAAAACTCTGCTGTCTT 22 11901056 0.929426898 2 22 135 1 1.477121255 0.033333333 0.272727273 0.466666667 22 0 0 30 2R:11901031-11901083 8 21 577 FBgn0033665 71.33333333 4.603333333 6.97 0.294392523 4.561911658 3.012912482 1 1 1 0.25 dme-bantam-3p 6mer3-8 TGATCT 2R 11977211 11977216 + 2R_11977211_11977216_+ 0.997071016 0.997702588 0.997386802 0.000446609 ADD1 FBtr0088042 11977075 11977721 2R + 11977191 11977234 3'utr ADD1 FlyBase G15024.1 AACATTTTATGTAAATACTTTGATCTGTTTATAGTTTAAACAAT 15 11977210 0.641064807 7 13 167 0.9375 1.176091259 0.0625 0.066666667 0.125 15 1 0 15 2R:11977191-11977234 6 ADD1 FBtr0088042 11977075 11977721 TGATCT 6mer3-8 dme-bantam-3p 2R + 11977199 11977234 3'utr ADD1 FlyBase G11414.1 ATGTAAATACTTTGATCTGTTTATAGTTTAAACAAT 17 11977210 0.712294705 6 16 184 0.931034483 1.431363764 0 0.529411765 0.724137931 17 2 0 27 2R:11977199-11977234 6 15 578 FBgn0026573 1224.666667 33.41666667 51.42333333 0.012248231 0.448877805 0.291696376 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 11977302 11977307 + 2R_11977302_11977307_+ 0.987685077 0.988805233 0.988245155 0.00079203 ADD1 FBtr0088042|FBtr0088042|FBtr0088042 11977075|11977075|11977075 11977721|11977721|11977721 2R + 11977265 11977324 3'utr ADD1 FlyBase G15025.1 GACATTAACACCATTATATTAACTGAATCGCGTATTCCTGTGAATATAAGTCGGGCACGT 28 11977299 0.983292618 9 27 202 0.941176471 1.505149978 0.088235294 0.178571429 0.323529412 28 2 0 32 2R:11977265-11977324 6 ADD1 FBtr0088042|FBtr0088042|FBtr0088042 11977075|11977075|11977075 11977721|11977721|11977721 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 11977284 11977323 3'utr ADD1 FlyBase G11415.1 TAACTGAATCGCGTATTCCTGTGAATATAAGTCGGGCACG 25 11977299 0.699335887 7 23 184 0.95 1.579783597 0.2 0.48 0.675 25 2 0 38 2R:11977284-11977323 6 26 579 FBgn0026573 1224.666667 33.41666667 51.42333333 0.021230267 0.778054863 0.505607053 3 3 3 0.25 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2R 11991313 11991320 + 2R_11991313_11991320_+ 0.630939314 0.63095478 0.630947047 1.10E-05 CG8298 FBtr0306003 11991281 11992350 2R + 11991105 11991372 stop_codon CG8298 FlyBase G15033.1 GAAATGCCTGCACTGGAACAACTACGAGACGTACGAGGCTGATATTGAGCTGTTTGCTCAGCGAGAACTTGATCCCAATTTACCTGTAAGGCGTTCCGTACCGGGCAGTATATTCCTGACCACTTCTTTTGCGATGATTATCCTGGCTAACTACTTAAAGTCCAATCCCCTGAAATAGTGGCTGATGTAGGGAAGAACGGCTGCTCTATCTAGTCAACCAAACACGTTCAAATGTGTGCATTAAAATTTATTGTTTAGTTTAGCATAT 178 11991312 0.976302187 34 169 1094 0.941176471 1.806179974 0.132352941 0.106741573 0.220588235 178 10 2 192 2R:11991105-11991372 8 CG8298 FBtr0306003 11991281 11992350 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R + 11991126 11991364 stop_codon CG8298 FlyBase G11420.1 CTACGAGACGTACGAGGCTGATATTGAGCTGTTTGCTCAGCGAGAACTTGATCCCAATTTACCTGTAAGGCGTTCCGTACCGGGCAGTATATTCCTGACCACTTCTTTTGCGATGATTATCCTGGCTAACTACTTAAAGTCCAATCCCCTGAAATAGTGGCTGATGTAGGGAAGAACGGCTGCTCTATCTAGTCAACCAAACACGTTCAAATGTGTGCATTAAAATTTATTGTTTAGTT 126 11991312 0.750569599 34 117 779 0.948598131 2.006466042 0.130841121 0.436507937 0.668224299 126 10 1 203 2R:11991126-11991364 8 48 580 FBgn0033673 177.0033333 9.53 14.54 0.271181334 5.036726128 3.301237964 1 1 1 0.25 dme-miR-14-3p 7mer-A1 AGACTGA 2R 12049766 12049772 + 2R_12049766_12049772_+ 0.811132931 0.81213555 0.811634241 0.000708945 Drep-1 FBtr0330629|FBtr0087978 12049191|12049164 12050172|12050172 2R + 12049691 12049788 3'utr Drep-1 FlyBase G15086.1 GTAGAGTGGAAACGCACATCAAATATTGTTTTTAGACCAATGCCATTGTGAATGTCATTCGTTAAAGGCCAATTGAGACTGACTGAATTTATGTGTAA 137 12049764 0.942985892 7 134 550 0.965517241 2.225309282 0.373563218 0.233576642 0.396551724 137 6 0 168 2R:12049691-12049788 7 Drep-1 FBtr0330629|FBtr0087978 12049191|12049164 12050172|12050172 AGACTGA 7mer-A1 dme-miR-14-3p 2R + 12049743 12049790 3'utr Drep-1 FlyBase G11459.1 TGTCATTCGTTAAAGGCCAATTGAGACTGACTGAATTTATGTGTAATA 98 12049764 0.754699072 4 96 372 0.962264151 1.582631439 0.352201258 0.428571429 0.647798742 98 3 3 153 2R:12049743-12049790 7 116 581 FBgn0024732 75.66666667 4.37 6.78 1.533039648 26.54462243 17.10914454 2 2 2 0.25 dme-miR-12-5p 6mer2-7 ATACTC 2R 12146152 12146157 - 2R_12146152_12146157_- 0.951706796 0.98251458 0.967110688 0.021784404 CG8878 FBtr0088018|FBtr0088017 12146022|12146022 12146701|12146701 2R - 12146123 12146237 3'utr CG8878 FlyBase G22272.1 TAGTTTCGTTAGGCTATCAACAACCATATTATAGACCACATGTACGACTCGTTTCACCCACATTTCATGCAGCCAGGTACATACTCTCCTCAAAAAGTATTTAATATAACTAGAT 24 12146156 0.792361975 10 23 145 1 1.447158031 0.142857143 0.166666667 0.285714286 24 0 0 28 2R:12146123-12146237 6 CG8878 FBtr0088018|FBtr0088017 12146022|12146022 12146701|12146701 ATACTC 6mer2-7 dme-miR-12-5p 2R - 12146112 12146207 3'utr CG8878 FlyBase G16887.1 ATAGACCACATGTACGACTCGTTTCACCCACATTTCATGCAGCCAGGTACATACTCTCCTCAAAAAGTATTTAATATAACTAGATAATGGTTATTT 16 12146156 0.978456746 7 14 89 0.916666667 1.041392685 0.083333333 0.375 0.583333333 16 1 1 22 2R:12146112-12146207 6 9 582 FBgn0027504 1146.95 34.64 53.11333333 0.007846898 0.259815242 0.169448977 -1 -1 -1 0.25 dme-miR-7-5p 6mer3-8 GTCTTC 2R 12167170 12167175 - 2R_12167170_12167175_- 0.946476283 0.814128717 0.8803025 0.093583885 Oda FBtr0088015|FBtr0088013|FBtr0088014 12166293|12166574|12167027 12167397|12167397|12167397 2R - 12167064 12167225 5'utr Oda FlyBase G22345.1 CTTTTTGAATCTTCGCGTTGTTTATGTAGTCGAAAATCGTTTTGAAAATTGTCTTCGGAGCGGCTTCATTTTTGGTAGACTTTCAATTATGGCCAGCCACGTTAAGAGCCTGATCGCAAATTACTATATTAAACTATATCCAACAACAACAAAAATCGAACG 37 12167176 0.979509746 17 37 271 1 1.643452676 0.045454545 0.189189189 0.318181818 37 0 0 44 2R:12167064-12167225 6 Oda FBtr0088014|FBtr0088015|FBtr0088013 12167027|12166293|12166574 12167397|12167397|12167397 GTCTTC 6mer3-8 dme-miR-7-5p 2R - 12167058 12167186 5'utr Oda FlyBase G16952.1 TTTTGAAAATTGTCTTCGGAGCGGCTTCATTTTTGGTAGACTTTCAATTATGGCCAGCCACGTTAAGAGCCTGATCGCAAATTACTATATTAAACTATATCCAACAACAACAAAAATCGAACGAAAACG 35 12167177 0.985440326 12 27 223 0.87037037 1.194976603 0.074074074 0.382352941 0.611111111 34 5 2 47 2R:12167058-12167186 6 14 583 FBgn0014184 5981.923333 429.3966667 665.3566667 0.002340384 0.032603886 0.021041346 1 2 1.5 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2R 12177463 12177469 - 2R_12177463_12177469_- 0.820533969 0.823059312 0.821796641 0.001785657 EndoG FBtr0088012 12177428 12177540 2R - 12177449 12177483 3'utr EndoG FlyBase G22363.1 AATTTTCTTCTTTTCCAAAGAACTTGTGGATTAAT 6 12177471 0.892011484 2 6 69 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2R:12177449-12177483 7 EndoG FBtr0088012 12177428 12177540 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 12177449 12177482 3'utr EndoG FlyBase G16968.1 ATTTTCTTCTTTTCCAAAGAACTTGTGGATTAAT 5 12177472 0.747228632 2 5 60 1 0.698970004 0 0 0 5 0 0 5 2R:12177449-12177482 7 5.5 584 FBgn0033690 109.39 12.2 18.82333333 0.050278819 0.450819672 0.292190544 2 3 2.5 0.25 dme-miR-79-3p 8mer-A1 TAGCTTTA 2R 12182209 12182216 + 2R_12182209_12182216_+ 0.623115031 0.625248958 0.624181995 0.001508966 wash FBtr0339595|FBtr0087989 12182199|12182199 12182373|12182373 2R + 12182165 12182254 stop_codon wash FlyBase G15122.1 GAACACTCCGAGGACGACGAGGATGGGTGGAACTAGTGAATATTTAGCTTTAGTACCGGTTTAAGTGCCTTGGCTGGCTTAAAGCACTAG 24 12182208 0.974772391 7 23 141 1 1.531478917 0.147058824 0.333333333 0.529411765 24 0 0 34 2R:12182165-12182254 8 wash FBtr0339595|FBtr0087989 12182199|12182199 12182373|12182373 TAGCTTTA 8mer-A1 dme-miR-79-3p 2R + 12182164 12182268 stop_codon wash FlyBase G11488.1 CGAACACTCCGAGGACGACGAGGATGGGTGGAACTAGTGAATATTTAGCTTTAGTACCGGTTTAAGTGCCTTGGCTGGCTTAAAGCACTAGCAACCTAGGTTCTC 16 12182208 0.985694226 10 13 114 0.923076923 1.079181246 0.038461538 0.4375 0.653846154 16 1 1 24 2R:12182164-12182268 8 10 585 FBgn0033692 122.6666667 8.66 13.35666667 0.081521739 1.154734411 0.748689793 1 1 1 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 2R 12192420 12192426 - 2R_12192420_12192426_- 0.521223715 0.521223491 0.521223603 1.41E-07 CG8858 FBtr0088008 12192372 12192572 2R - 12192373 12192439 3'utr CG8858 FlyBase G22374.1 GATAATTTTCTATTGTGATTCATTGATCCAGGAGTGTAAGGAAACCTTAAATATACTATCATAAATA 14 12192418 0.991198907 6 14 148 1 1.255272505 0.277777778 0.214285714 0.388888889 14 0 0 18 2R:12192373-12192439 7 CG8858 FBtr0088008 12192372 12192572 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 12192412 12192437 3'utr CG8858 FlyBase G16978.1 TAATTTTCTATTGTGATTCATTGATC 7 12192429 0.571277289 4 5 60 0.7 0.84509804 0.1 0.428571429 0.6 7 3 0 7 2R:12192412-12192437 7 9.5 586 FBgn0033698 597.0133333 12.17333333 18.65666667 0.015912542 0.780394304 0.509201358 -8 3 -2.5 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 12275344 12275351 + 2R_12275344_12275351_+ 0.453394625 0.38514766 0.419271142 0.048257846 Cam FBtr0304963|FBtr0304964 12273793|12273793 12278809|12276621 2R + 12275325 12275363 3'utr Cam FlyBase G15139.1 ATACATATAAATACCTAATGTACTTAATGCAACAGGAAA 34 12275343 0.741351897 4 34 205 1 1.681241237 0.041666667 0.235294118 0.458333333 34 0 0 48 2R:12275325-12275363 8 Cam FBtr0304964|FBtr0304963 12273793|12273793 12276621|12278809 GTACTTAA 8mer-A1 dme-miR-252-5p 2R + 12275305 12275366 3'utr Cam FlyBase G11498.1 AACTCTATACATATATATATATACATATAAATACCTAATGTACTTAATGCAACAGGAAAACC 23 12275343 0.975109623 2 23 145 1 1.51851394 0.121212121 0.391304348 0.575757576 23 0 0 33 2R:12275305-12275366 8 28 587 FBgn0000253 25804.84 1958.443333 3036.34 0.001085068 0.014297069 0.009221629 1 1 1 0.25 dme-miR-305-3p 7mer-m1 TGTGCCG 2R 12322937 12322943 - 2R_12322937_12322943_- 0.798774015 0.780881594 0.789827804 0.012651837 CG8841 FBtr0087966|FBtr0087964|FBtr0087965 12322505|12322505|12322505 12323316|12323316|12323316 2R - 12322929 12322974 3'utr CG8841 FlyBase G22409.1 GTTTTTGTAATCTGTGACAGAAAATGTTCCTTGTGCCGTATATTTT 30 12322949 0.727617264 4 30 214 1 1.579783597 0.605263158 0.2 0.368421053 30 0 0 38 2R:12322929-12322974 7 CG8841 FBtr0087965|FBtr0087966|FBtr0087964 12322505|12322505|12322505 12323316|12323316|12323316 TGTGCCG 7mer-m1 dme-miR-305-3p 2R - 12322919 12322963 3'utr CG8841 FlyBase G17000.1 CTGTGACAGAAAATGTTCCTTGTGCCGTATATTTTATTGCATGGT 27 12322950 0.976292033 3 27 185 1 1.602059991 0.65 0.37037037 0.575 27 0 0 40 2R:12322919-12322963 7 27.5 588 FBgn0033713 204.63 7.073333333 10.83333333 0.134388897 3.887841659 2.538461538 6 7 6.5 0.25 dme-miR-277-3p 7mer-A1 GCATTTA 2R 12323254 12323260 - 2R_12323254_12323260_- 0.817976659 0.808279083 0.813127871 0.006857239 CG8841 FBtr0087966|FBtr0087964|FBtr0087965 12322505|12322505|12322505 12323316|12323316|12323316 2R - 12323234 12323382 stop_codon CG8841 FlyBase G22411.1 CGCAACGTGGAGCCTGCCATCTGGTACGATACGGAGGTCAAGCTCTTCGAGATTCAGCGCGTCTAGGTCAGTAAGTGGACTCCCAGCTACACCAGCAGCGCAATCGTAGCTTACACGCTTTGGCATTTACTGTAGTTAATTTATTTAGT 43 12323262 0.980589189 10 41 292 0.980392157 1.397940009 0.117647059 0.162790698 0.294117647 43 0 1 50 2R:12323234-12323382 7 CG8841 FBtr0087965|FBtr0087966|FBtr0087964 12322505|12322505|12322505 12323316|12323316|12323316 GCATTTA 7mer-A1 dme-miR-277-3p 2R - 12323240 12323283 3'utr CG8841 FlyBase G17002.1 GCAATCGTAGCTTACACGCTTTGGCATTTACTGTAGTTAATTTA 18 12323262 0.714205808 4 15 135 0.84 0.84509804 0.12 0.277777778 0.48 18 2 2 21 2R:12323240-12323283 7 25 589 FBgn0033713 204.63 7.073333333 10.83333333 0.122171725 3.534401508 2.307692308 2 2 2 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 12339635 12339642 - 2R_12339635_12339642_- 0.621910915 0.621770002 0.621840459 9.96E-05 CG8839 FBtr0087957|FBtr0087959|FBtr0087958|FBtr0087960 12339608|12339608|12339608|12339608 12339892|12339892|12339892|12339892 2R - 12339620 12339719 3'utr CG8839 FlyBase G22424.1 TCGATGTGGATTTATCTATTTTGTATGTGTTTTTAAATGTAATCTAATCATAGATCCGCGCGGATCCGTTCCCGTTTTGCATTTATAATAAATAATTGCA 26 12339643 0.991061188 8 24 260 0.933333333 1.146128036 0.166666667 0.153846154 0.266666667 26 1 1 28 2R:12339620-12339719 8 CG8839 FBtr0087958|FBtr0087960|FBtr0087957|FBtr0087959 12339608|12339608|12339608|12339608 12339892|12339892|12339892|12339892 TGCATTTA 8mer-A1 dme-miR-277-3p 2R - 12339626 12339704 3'utr CG8839 FlyBase G17018.1 CTATTTTGTATGTGTTTTTAAATGTAATCTAATCATAGATCCGCGCGGATCCGTTCCCGTTTTGCATTTATAATAAATA 20 12339643 0.748667447 7 17 180 0.911764706 1.014240439 0.176470588 0.5 0.705882353 20 1 2 31 2R:12339626-12339704 8 13.5 590 FBgn0033717 1014.353333 58.28666667 87.84 0.013308972 0.231613863 0.153688525 1 1 1 0.25 dme-miR-252-5p 7mer-m8 GTACTTA 2R 12425347 12425353 + 2R_12425347_12425353_+ 0.577245267 0.577425598 0.577335433 0.000127491 CG8520 FBtr0303222|FBtr0087926 12425250|12425250 12425459|12425459 2R + 12425333 12425376 3'utr CG8520 FlyBase G15212.1 ATTCACAATATCTTGTACTTACAAATTTCATATCGAAAATGCAA 16 12425346 0.939407031 2 16 150 1 1.342422681 0.045454545 0.25 0.454545455 16 0 0 22 2R:12425333-12425376 7 CG8520 FBtr0303222|FBtr0087926 12425250|12425250 12425459|12425459 GTACTTA 7mer-m8 dme-miR-252-5p 2R + 12425335 12425367 3'utr CG8520 FlyBase G11545.1 TCACAATATCTTGTACTTACAAATTTCATATCG 13 12425346 0.727559962 2 12 101 1 1.255272505 0.111111111 0.230769231 0.444444444 13 0 0 18 2R:12425335-12425367 7 14 591 FBgn0033734 185.89 13.06 20.03333333 0.075313357 1.071975498 0.698835275 1 1 1 0.25 dme-miR-1008-3p 8mer-A1 AGCTGTGA 2R 12436888 12436895 + 2R_12436888_12436895_+ 0.478500448 0.634271123 0.556385786 0.110146518 CG30051 FBtr0114521 12436846 12436990 2R + 12436864 12436958 3'utr CG30051 FlyBase G15218.1 ACATGCAGTTAAAAGCACAAGTAGAGCTGTGAAATTATATGTTATGCTTTAAATGGATTTTCCTGTCATCTAGATGTAGTTTGCTGCACAGCTCT 35 12436885 0.965363005 11 31 303 0.894736842 1.531478917 0.289473684 0.085714286 0.157894737 35 4 0 34 2R:12436864-12436958 8 CG30051 FBtr0114521 12436846 12436990 AGCTGTGA 8mer-A1 dme-miR-1008-3p 2R + 12436864 12436956 3'utr CG30051 FlyBase G11549.1 ACATGCAGTTAAAAGCACAAGTAGAGCTGTGAAATTATATGTTATGCTTTAAATGGATTTTCCTGTCATCTAGATGTAGTTTGCTGCACAGCT 25 12436898 0.787843206 12 23 182 0.925 1.267171728 0.2 0.44 0.65 25 2 1 37 2R:12436864-12436956 8 16.5 592 FBgn0050051 28.33333333 5.406666667 8.236666667 0.582352941 3.051787916 2.003237556 3 -10 -3.5 0.25 dme-miR-79-3p 7mer-m8 TAGCTTT 2R 12452116 12452122 + 2R_12452116_12452122_+ 0.402876287 0.408031459 0.405453873 0.003645277 Dyb FBtr0305077|FBtr0100298|FBtr0087929|FBtr0308613|FBtr0087930 12452039|12452039|12451987|12452039|12451987 12452916|12452916|12452916|12452916|12452916 2R + 12452028 12452156 stop_codon Dyb FlyBase G15221.1 GCAGAAGAACTAAGAACTGGCTACCAGTGGAAACCGCAGGACTGGGAATCTCCAGAGGCAGCTGGATGGATGAAGACGAATTCTCGCTTAGCTTTCTACCTTACCTTAACTCATACGTTGACTTAGAGC 22 12452115 0.983257715 12 22 141 1 1.361727836 0.260869565 0.045454545 0.086956522 22 0 0 23 2R:12452028-12452156 7 Dyb FBtr0087930|FBtr0087929|FBtr0308613|FBtr0305077|FBtr0100298 12451987|12451987|12452039|12452039|12452039 12452916|12452916|12452916|12452916|12452916 TAGCTTT 7mer-m8 dme-miR-79-3p 2R + 12452071 12452134 3'utr Dyb FlyBase G11550.1 GGGAATCTCCAGAGGCAGCTGGATGGATGAAGACGAATTCTCGCTTAGCTTTCTACCTTACCTT 17 12452115 0.98766672 5 17 151 1 1.380211242 0.083333333 0.294117647 0.5 17 0 0 24 2R:12452071-12452134 7 13 593 FBgn0033739 253.3333333 9.266666667 14.15666667 0.051315789 1.402877698 0.918295267 1 1 1 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 12487565 12487572 - 2R_12487565_12487572_- 0.499127529 0.491887455 0.495507492 0.005119453 fdl FBtr0346633 12487449 12488439 2R - 12487555 12487618 3'utr fdl FlyBase G22470.1 TTCAACATTTGGAATGATTGATAGGATCCTTATGCAACTTGTTTTCGTACTTAAGACTTTCAAA 11 12487588 0.669967709 10 11 89 1 1.041392685 0.181818182 0 0 11 0 0 11 2R:12487555-12487618 8 fdl FBtr0346633 12487449 12488439 GTACTTAA 8mer-A1 dme-miR-252-5p 2R - 12487546 12487616 3'utr fdl FlyBase G17050.1 CAACATTTGGAATGATTGATAGGATCCTTATGCAACTTGTTTTCGTACTTAAGACTTTCAAAGAAAATATC 11 12487600 0.98570665 8 10 88 0.928571429 1.113943352 0 0.181818182 0.357142857 11 1 0 13 2R:12487546-12487616 8 3.5 594 FBgn0045063 1364.66 46.87666667 71.74333333 0.002564741 0.074664012 0.048785021 16 28 22 0.25 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2R 12507934 12507940 - 2R_12507934_12507940_- 0.790263799 0.77401567 0.782139735 0.011489142 vis FBtr0087945|FBtr0087945|FBtr0087944|FBtr0087944 12507894|12507894|12507894|12507894 12508268|12508268|12508268|12508268 2R - 12507925 12507954 3'utr vis FlyBase G22491.1 GTGTACACTACTGATACTTAAATAAAACAA 5 12507943 0.798321824 2 5 32 1 0.698970004 0.6 0 0 5 0 0 5 2R:12507925-12507954 7 vis FBtr0087945|FBtr0087945|FBtr0087944|FBtr0087944 12507894|12507894|12507894|12507894 12508268|12508268|12508268|12508268 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2R - 12507928 12507970 3'utr vis FlyBase G17062.1 TTTTAAACTTAACATTGTGTACACTACTGATACTTAAATAAAA 6 12507943 0.982665454 2 5 40 1 1.041392685 0.272727273 0.333333333 0.636363636 6 0 0 11 2R:12507928-12507970 7 4.5 595 FBgn0033748 6.173333333 0.356666667 0.556666667 0.728941685 12.61682243 8.083832335 3 3 3 0.25 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2R 12511757 12511763 - 2R_12511757_12511763_- 0.799270595 0.776533372 0.787901984 0.016077628 achi FBtr0339635|FBtr0339635|FBtr0087942|FBtr0087942|FBtr0087943|FBtr0087943 12511532|12511532|12511532|12511532|12511532|12511532 12512070|12512070|12512070|12512070|12512070|12512070 2R - 12511728 12511820 3'utr achi FlyBase G22494.1 AACAAATCGACTTAGTTTTGGACCTGACTCTTTTAAACTTAACATGTACACTACTGATACTTAAATAAAACATAAACAAGCATTTGAAATACA 12 12511766 0.985463607 6 12 97 1 1.113943352 0.153846154 0.083333333 0.153846154 12 0 0 13 2R:12511728-12511820 7 achi FBtr0339635|FBtr0339635|FBtr0087942|FBtr0087942|FBtr0087943|FBtr0087943 12511532|12511532|12511532|12511532|12511532|12511532 12512070|12512070|12512070|12512070|12512070|12512070 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2R - 12511730 12511817 3'utr achi FlyBase G17065.1 AAATCGACTTAGTTTTGGACCTGACTCTTTTAAACTTAACATGTACACTACTGATACTTAAATAAAACATAAACAAGCATTTGAAATA 8 12511766 0.980265247 6 8 60 1 0.954242509 0 0.125 0.222222222 8 0 0 9 2R:12511730-12511817 7 4.5 596 FBgn0033749 292.4933333 16.57 25.38 0.015384966 0.271575136 0.177304965 3 3 3 0.25 dme-miR-12-5p 6mer3-8 AATACT 2R 12575330 12575335 - 2R_12575330_12575335_- 0.953722345 0.700360252 0.827041299 0.179153988 Sin3A FBtr0303565|FBtr0087889|FBtr0087890|FBtr0339651|FBtr0087887|FBtr0347014|FBtr0339650|FBtr0087888|FBtr0304683|FBtr0303566 12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238 12575974|12578533|12575974|12577703|12575974|12578162|12575974|12577560|12575974|12577560 2R - 12575314 12575363 3'utr Sin3A FlyBase G22506.1 ACATACAAACCGTGTACAATTCCTTGTGAATACTATTGTTTATATATTTT 38 12575341 0.71286501 10 35 333 0.941176471 1.681241237 0.411764706 0.210526316 0.411764706 38 3 0 48 2R:12575314-12575363 6 Sin3A FBtr0303566|FBtr0304683|FBtr0087888|FBtr0339650|FBtr0347014|FBtr0087887|FBtr0339651|FBtr0087890|FBtr0087889|FBtr0303565 12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238 12577560|12575974|12577560|12575974|12578162|12575974|12577703|12575974|12578533|12575974 AATACT 6mer3-8 dme-miR-12-5p 2R - 12575239 12575364 3'utr Sin3A FlyBase G17074.1 CACATACAAACCGTGTACAATTCCTTGTGAATACTATTGTTTATATATTTTACGCGTTTAAGGTTATTAAGTTAAATTGTAAAAATGTATTGCGCAGATATTAAAACAAAAGTTTATCAAAAGTGA 28 12575341 0.984253006 15 28 224 1 1.643452676 0.227272727 0.392857143 0.613636364 28 0 0 44 2R:12575239-12575364 6 22.5 597 FBgn0022764 4529.02 67.97 103.85 0.004967962 0.331028395 0.216658642 6 6 6 0.25 dme-miR-305-5p 7mer-A1 GTACAAA 2R 12575718 12575724 - 2R_12575718_12575724_- 0.682391071 0.588793487 0.635592279 0.066183498 Sin3A FBtr0303565|FBtr0087889|FBtr0087890|FBtr0339651|FBtr0087887|FBtr0347014|FBtr0339650|FBtr0087888|FBtr0304683|FBtr0303566 12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238 12575974|12578533|12575974|12577703|12575974|12578162|12575974|12577560|12575974|12577560 2R - 12575658 12575952 3'utr Sin3A FlyBase G22508.1 CGGCAGTGGTCGCTGCATGGCCAGATTCTTCATTCACATGACGACAATGAGAAGATGTGGGATGAATTGCCTGCATTGAAATAAATAGTGTTTTAAATGTGATACCAGTTCCTCGACGCGGTCATCGAGATTGCAGCTATACCAACGCGCGATCGACTGTTTAATGTCCGGCATGGCATTGGGCTCTGGAAATTGATTGATGAACGAAGGAAAGCTCTTTTTCATATTGTACAAAAAGTCATTTAATCTTAGGCGAAAGTGCTCCTAAATAAGAATTTTATAGTCTTACGTTGCA 413 12575726 0.840210234 60 385 2778 0.939516129 2.066325925 0.221774194 0.157384988 0.298387097 413 27 3 466 2R:12575658-12575952 7 Sin3A FBtr0303566|FBtr0304683|FBtr0087888|FBtr0339650|FBtr0347014|FBtr0087887|FBtr0339651|FBtr0087890|FBtr0087889|FBtr0303565 12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238|12575238 12577560|12575974|12577560|12575974|12578162|12575974|12577703|12575974|12578533|12575974 GTACAAA 7mer-A1 dme-miR-305-5p 2R - 12575667 12575952 3'utr Sin3A FlyBase G17076.1 CGGCAGTGGTCGCTGCATGGCCAGATTCTTCATTCACATGACGACAATGAGAAGATGTGGGATGAATTGCCTGCATTGAAATAAATAGTGTTTTAAATGTGATACCAGTTCCTCGACGCGGTCATCGAGATTGCAGCTATACCAACGCGCGATCGACTGTTTAATGTCCGGCATGGCATTGGGCTCTGGAAATTGATTGATGAACGAAGGAAAGCTCTTTTTCATATTGTACAAAAAGTCATTTAATCTTAGGCGAAAGTGCTCCTAAATAAGAATTTTATAGTCT 271 12575726 0.984678798 50 234 1867 0.871536524 1.760924848 0.214105793 0.332103321 0.544080605 271 46 5 346 2R:12575667-12575952 7 102 598 FBgn0022764 4529.02 67.97 103.85 0.022521428 1.500662057 0.982185845 2 2 2 0.25 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 12618007 12618013 + 2R_12618007_12618013_+ 0.371689567 0.418578232 0.395133899 0.033155247 CG45086 FBtr0344532|FBtr0344531 12613656|12613656 12619820|12619820 2R + 12617992 12618095 3'utr CG45086 FlyBase G15304.1 AATGGAGGAATCTAAAGCTTTATTTCGTACTATAATTACATACCCTTGGTTTCAAAATTCGTCAGTTATTCTTTTCCTGAATAAGAAGGACTTGTTGGAAGAGA 25 12618036 0.987974227 11 24 210 0.96969697 1.204119983 0.060606061 0.2 0.393939394 25 0 1 32 2R:12617992-12618095 7 CG45086 FBtr0344531|FBtr0344532 12613656|12613656 12619820|12619820 AGCTTTA 7mer-A1 dme-miR-79-3p 2R + 12617993 12618060 3'utr CG45086 FlyBase G11606.1 ATGGAGGAATCTAAAGCTTTATTTCGTACTATAATTACATACCCTTGGTTTCAAAATTCGTCAGTTAT 17 12618036 0.788994099 8 14 151 0.869565217 1 0.043478261 0.352941176 0.52173913 17 2 1 20 2R:12617993-12618060 7 8.5 599 FBgn0266487 1140.346667 45.66 70.03666667 0.007453874 0.186158563 0.121364999 -29 -29 -29 0.25 dme-miR-995-5p 6mer3-8 AATTCG 2R 12618047 12618052 + 2R_12618047_12618052_+ 0.98394723 0.864799157 0.924373194 0.084250359 CG45086 FBtr0344532|FBtr0344531 12613656|12613656 12619820|12619820 2R + 12617992 12618095 3'utr CG45086 FlyBase G15304.1 AATGGAGGAATCTAAAGCTTTATTTCGTACTATAATTACATACCCTTGGTTTCAAAATTCGTCAGTTATTCTTTTCCTGAATAAGAAGGACTTGTTGGAAGAGA 25 12618049 0.987974227 11 24 210 0.96969697 1.204119983 0.060606061 0.2 0.393939394 25 0 1 32 2R:12617992-12618095 6 CG45086 FBtr0344531|FBtr0344532 12613656|12613656 12619820|12619820 AATTCG 6mer3-8 dme-miR-995-5p 2R + 12617993 12618060 3'utr CG45086 FlyBase G11606.1 ATGGAGGAATCTAAAGCTTTATTTCGTACTATAATTACATACCCTTGGTTTCAAAATTCGTCAGTTAT 17 12618037 0.788994099 8 14 151 0.869565217 1 0.043478261 0.352941176 0.52173913 17 2 1 20 2R:12617993-12618060 6 10 600 FBgn0266487 1140.346667 45.66 70.03666667 0.008769263 0.219010074 0.142782352 -2 10 4 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 2R 12619174 12619180 + 2R_12619174_12619180_+ 0.52069105 0.52118243 0.52093674 0.000347402 CG45086 FBtr0344532|FBtr0344531 12613656|12613656 12619820|12619820 2R + 12619137 12619195 stop_codon CG45086 FlyBase G15306.1 TTTGGTCTAAACTGGATTTGGATCGAAAAACTATTTTTGTGATTTTTATACAAACACAC 34 12619172 0.865569687 9 33 412 0.976744186 1.62324929 0 0.176470588 0.348837209 34 1 0 42 2R:12619137-12619195 7 CG45086 FBtr0344531|FBtr0344532 12613656|12613656 12619820|12619820 TGTGATT 7mer-m1 dme-miR-308-3p 2R + 12619137 12619189 stop_codon CG45086 FlyBase G11608.1 TTTGGTCTAAACTGGATTTGGATCGAAAAACTATTTTTGTGATTTTTATACAA 18 12619173 0.993389353 5 18 219 1 1.431363764 0 0.388888889 0.592592593 18 0 0 27 2R:12619137-12619189 7 24 601 FBgn0266487 1140.346667 45.66 70.03666667 0.021046232 0.525624179 0.342677645 2 1 1.5 0.25 dme-miR-184-3p 8mer-A1 TCCGTCCA 2R 12621531 12621538 + 2R_12621531_12621538_+ 0.630233383 0.629542778 0.62988808 0.000488328 Galphaq FBtr0304955 12619145 12623197 2R + 12621497 12621551 3'utr Galphaq FlyBase G15313.1 GACATTCACACACTGACATACATATATATAGTTTTCCGTCCAATGAATTGCATCA 41 12621530 0.986135704 6 40 339 0.979591837 1.681241237 0.306122449 0.170731707 0.306122449 41 1 0 48 2R:12621497-12621551 8 Galphaq FBtr0304955 12619145 12623197 TCCGTCCA 8mer-A1 dme-miR-184-3p 2R + 12621511 12621545 3'utr Galphaq FlyBase G11613.1 GACATACATATATATAGTTTTCCGTCCAATGAATT 23 12621530 0.699414063 3 21 186 0.896551724 1.414973348 0.413793103 0.260869565 0.413793103 23 3 0 26 2R:12621511-12621545 8 31.5 602 FBgn0004435 2624.776667 94.95333333 145.51 0.012001021 0.331741908 0.216479967 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 12628846 12628852 - 2R_12628846_12628852_- 0.801793001 0.625409878 0.71360144 0.124721686 muskelin FBtr0087886|FBtr0087886|FBtr0087886|FBtr0333103|FBtr0333103|FBtr0333103 12628695|12628695|12628695|12628695|12628695|12628695 12629027|12629027|12629027|12629027|12629027|12629027 2R - 12628818 12628862 3'utr muskelin FlyBase G22558.1 ATGATTTTATTGTGATAGTTCACGTGTACTGAAACCCCGGCTAAA 35 12628837 0.786825647 7 34 301 0.977272727 1.33243846 0.386363636 0.228571429 0.386363636 35 0 1 43 2R:12628818-12628862 7 muskelin FBtr0333103|FBtr0333103|FBtr0333103|FBtr0087886|FBtr0087886|FBtr0087886 12628695|12628695|12628695|12628695|12628695|12628695 12629027|12629027|12629027|12629027|12629027|12629027 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 12628818 12628882 3'utr muskelin FlyBase G17109.1 ATGCAAAGCATGACATATATATGATTTTATTGTGATAGTTCACGTGTACTGAAACCCCGGCTAAA 22 12628838 0.90473748 7 20 158 0.935483871 1.462397998 0.35483871 0.272727273 0.483870968 22 2 0 29 2R:12628818-12628882 7 25 603 FBgn0033757 131.3333333 5.313333333 8.116666667 0.19035533 4.705144291 3.080082136 -15 -14 -14.5 0.25 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 12640583 12640589 + 2R_12640583_12640589_+ 0.658794614 0.655092827 0.65694372 0.002617568 Iswi FBtr0087843|FBtr0087842|FBtr0087841 12640336|12640336|12640336 12640628|12640628|12640628 2R + 12640538 12640622 3'utr Iswi FlyBase G15352.1 ACATTACTATTGCGTGCCGCTGTATTCTATTCCAAATAATTGTATTGTGTTCTAAGACTATAATCATTATATTTATATAAATCAA 64 12640582 0.719276264 16 63 566 0.973684211 1.86923172 0.118421053 0.1875 0.315789474 64 2 0 74 2R:12640538-12640622 7 Iswi FBtr0087843|FBtr0087842|FBtr0087841 12640336|12640336|12640336 12640628|12640628|12640628 TGTGTTC 7mer-m8 dme-miR-317-3p 2R + 12640504 12640623 3'utr Iswi FlyBase G11640.1 AAGTTTTTTTAAACACCCGCCTACACATCCGACTACATTACTATTGCGTGCCGCTGTATTCTATTCCAAATAATTGTATTGTGTTCTAAGACTATAATCATTATATTTATATAAATCAAC 44 12640582 0.987468251 16 43 378 0.985714286 1.838849091 0.2 0.409090909 0.628571429 44 1 0 69 2R:12640504-12640623 7 27 604 FBgn0011604 1337.66 45.99333333 70.94 0.020184501 0.5870416 0.380603327 1 1 1 0.25 dme-miR-34-5p 6mer2-7 ACTGCC 2R 1266501 1266506 + 2R_1266501_1266506_+ 0.800830662 0.949895948 0.875363305 0.105405014 CG40191 FBtr0113825 1266025 1267747 2R + 1266460 1266520 3'utr CG40191 FlyBase G12545.1 ATACATACAAGCTGTAATATGTTGCGCTATACTTCAAAGTTACTGCCTTACACTGACCGAA 22 1266499 0.961511361 6 22 164 1 1.414973348 0.115384615 0.181818182 0.307692308 22 0 0 26 2R:1266460-1266520 6 CG40191 FBtr0113825 1266025 1267747 ACTGCC 6mer2-7 dme-miR-34-5p 2R + 1266458 1266512 3'utr CG40191 FlyBase G9611.1 TTATACATACAAGCTGTAATATGTTGCGCTATACTTCAAAGTTACTGCCTTACAC 14 1266499 0.980579351 7 14 96 1 1.322219295 0.142857143 0.357142857 0.571428571 14 0 0 21 2R:1266458-1266512 6 15.5 605 FBgn0058191 1436.35 98.49 150.6766667 0.010791242 0.157376383 0.102869279 2 2 2 0.25 dme-miR-252-5p 6mer3-8 GTACTT 2R 12670961 12670966 - 2R_12670961_12670966_- 0.906049561 0.846845423 0.876447492 0.041863691 CG42708 FBtr0302976|FBtr0302977|FBtr0302975|FBtr0302974|FBtr0302973|FBtr0344191|FBtr0302972 12670481|12670481|12670481|12670481|12670604|12670481|12670604 12671175|12671175|12671175|12671175|12671175|12671175|12671175 2R - 12670817 12670996 3'utr CG42708 FlyBase G22583.1 CGAGGCGGATCCACTGCACGAGCGGCATTTGTACTTGTACTTGGTAGCGCTTAGTTAGCCACAAAAATTCCATGTTATCCTACGAAACAATGACAATAATCTTAACGGATATCTAACTTTCCCACATAACTGGGGTCTGTGACCTGCCTAAATGTATTGCATTCGTACTTGTCAATTGAT 105 12670968 0.984096722 21 102 806 0.959016393 2.068185862 0.073770492 0.161904762 0.278688525 105 5 0 117 2R:12670817-12670996 6 CG42708 FBtr0302974|FBtr0302975|FBtr0302977|FBtr0302976|FBtr0302972|FBtr0344191|FBtr0302973 12670481|12670481|12670481|12670481|12670604|12670481|12670604 12671175|12671175|12671175|12671175|12671175|12671175|12671175 GTACTT 6mer3-8 dme-miR-252-5p 2R - 12670926 12670991 3'utr CG42708 FlyBase G17127.1 CGGATCCACTGCACGAGCGGCATTTGTACTTGTACTTGGTAGCGCTTAGTTAGCCACAAAAATTCC 30 12670968 0.986021563 6 29 243 0.977272727 1.633468456 0.045454545 0.266666667 0.5 30 1 0 43 2R:12670926-12670991 6 54 606 FBgn0261625 1259.506667 54.11 83.17333333 0.042873929 0.997967104 0.649246553 2 2 2 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 12750677 12750683 + 2R_12750677_12750683_+ 0.495448824 0.489430287 0.492439555 0.004255722 CG42663 FBtr0302645|FBtr0302645|FBtr0302645|FBtr0302644|FBtr0302644|FBtr0302644|FBtr0310576|FBtr0310576|FBtr0310576 12750597|12750597|12750597|12750597|12750597|12750597|12750597|12750597|12750597 12751545|12751545|12751545|12751545|12751545|12751545|12751545|12751545|12751545 2R + 12750651 12750763 3'utr CG42663 FlyBase G15384.1 TATTTAAAGATTTAAAAAGACTAAATTGTGATATATTCAAACAAAACAAAACCGAATCGAGAGTTACAGAAGCATTAAGAGATGATGGCCAGGATGAGCAGGCACGTTTTGTA 394 12750676 0.982193439 16 369 2739 0.936734694 1.36078269 0.026530612 0.198473282 0.357142857 393 12 19 459 2R:12750651-12750763 7 CG42663 FBtr0310576|FBtr0310576|FBtr0310576|FBtr0302644|FBtr0302644|FBtr0302644|FBtr0302645|FBtr0302645|FBtr0302645 12750597|12750597|12750597|12750597|12750597|12750597|12750597|12750597|12750597 12751545|12751545|12751545|12751545|12751545|12751545|12751545|12751545|12751545 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 12750652 12750762 3'utr CG42663 FlyBase G11663.1 ATTTAAAGATTTAAAAAGACTAAATTGTGATATATTCAAACAAAACAAAACCGAATCGAGAGTTACAGAAGCATTAAGAGATGATGGCCAGGATGAGCAGGCACGTTTTGT 290 12750676 0.825928625 16 271 1963 0.935323383 1.53379516 0.017412935 0.3 0.495024876 290 16 10 376 2R:12750652-12750762 7 323 607 FBgn0261545 747.68 22.44 34.5 0.432002996 14.39393939 9.362318841 1 1 1 0.25 dme-miR-7-5p 7mer-m8 GTCTTCC 2R 12751040 12751046 + 2R_12751040_12751046_+ 0.686219843 0.675050788 0.680635315 0.007897676 CG42663 FBtr0302645|FBtr0302644|FBtr0310576 12750597|12750597|12750597 12751545|12751545|12751545 2R + 12751020 12751092 3'utr CG42663 FlyBase G15386.1 GTAGGTGAACCAAGACTGTAGTCTTCCGCACAAGTCGAGTGTATTCGTAGGACTTGGTTAGAGTTAACCACAT 26 12751038 0.716306019 7 24 131 0.935483871 1.462397998 0.129032258 0.115384615 0.258064516 26 2 0 29 2R:12751020-12751092 7 CG42663 FBtr0310576|FBtr0302644|FBtr0302645 12750597|12750597|12750597 12751545|12751545|12751545 GTCTTCC 7mer-m8 dme-miR-7-5p 2R + 12751009 12751050 3'utr CG42663 FlyBase G11665.1 ATGGTCACGTAGTAGGTGAACCAAGACTGTAGTCTTCCGCAC 14 12751038 0.911693186 4 14 59 1 1.342422681 0.227272727 0.5 0.681818182 14 0 0 22 2R:12751009-12751050 7 16 608 FBgn0261545 747.68 22.44 34.5 0.021399529 0.713012478 0.463768116 2 2 2 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 12751141 12751148 + 2R_12751141_12751148_+ 0.620983732 0.620542155 0.620762944 0.000312188 CG42663 FBtr0302645|FBtr0302644|FBtr0310576 12750597|12750597|12750597 12751545|12751545|12751545 2R + 12751094 12751199 3'utr CG42663 FlyBase G15387.1 AGCTAATCCGGATTAGTGCTCCTCAGACACAACAGCAGTTGAACATTTGCATTTAAGGGTGAAATATTTCAAAGTGTTTACGATGCAGTATATGATGCATATATAT 91 12751140 0.829062939 8 89 684 0.981481481 2.025305865 0.518518519 0.153846154 0.287037037 91 2 0 106 2R:12751094-12751199 8 CG42663 FBtr0310576|FBtr0302644|FBtr0302645 12750597|12750597|12750597 12751545|12751545|12751545 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 12751094 12751203 3'utr CG42663 FlyBase G11667.1 AGCTAATCCGGATTAGTGCTCCTCAGACACAACAGCAGTTGAACATTTGCATTTAAGGGTGAAATATTTCAAAGTGTTTACGATGCAGTATATGATGCATATATATATAT 63 12751140 0.931687536 7 60 479 0.953488372 1.612783857 0.453488372 0.253968254 0.453488372 63 3 1 82 2R:12751094-12751203 8 58 609 FBgn0261545 747.68 22.44 34.5 0.077573293 2.584670232 1.68115942 1 1 1 0.25 dme-miR-11-3p 7mer-m1 TGTGATG 2R 12849573 12849579 - 2R_12849573_12849579_- 0.534382296 0.506642908 0.520512602 0.019614718 CG17574 FBtr0306580|FBtr0087816|FBtr0306583|FBtr0344926|FBtr0306579|FBtr0306581|FBtr0337029|FBtr0306582|FBtr0331979 12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356 12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736 2R - 12849552 12849644 3'utr CG17574 FlyBase G22629.2 AACTCCAAACTCCTGGTAAAAAACCAAGTGAAAGCGATCGCACAACGAGCCATTTTTATATTCCATGTGATGTATGTAAAGTGTACATATAAC 35 12849585 0.984357853 14 31 306 0.957446809 1.653212514 0.042553191 0.285714286 0.468085106 35 2 0 45 2R:12849552-12849644 7 CG17574 FBtr0306579|FBtr0344926|FBtr0087816|FBtr0306583|FBtr0306580|FBtr0331979|FBtr0306582|FBtr0337029|FBtr0306581 12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356 12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736 TGTGATG 7mer-m1 dme-miR-11-3p 2R - 12849544 12849622 3'utr CG17574 FlyBase G17161.1 ACCAAGTGAAAGCGATCGCACAACGAGCCATTTTTATATTCCATGTGATGTATGTAAAGTGTACATATAACTTAAGCGC 32 12849585 0.848008398 13 30 251 0.897959184 1.643452676 0 0.34375 0.571428571 32 5 0 44 2R:12849544-12849622 7 25 610 FBgn0033777 586.8266667 68.93 105.5833333 0.042602018 0.362686784 0.236779795 6 6 6 0.25 dme-miR-184-3p 6mer3-8 TCCGTC 2R 12849703 12849708 - 2R_12849703_12849708_- 0.877555752 0.857795067 0.86767541 0.013972925 CG17574 FBtr0306580|FBtr0087816|FBtr0306583|FBtr0344926|FBtr0306579|FBtr0306581|FBtr0337029|FBtr0306582|FBtr0331979 12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356 12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736 2R - 12849659 12849758 stop_codon CG17574 FlyBase G22630.1 CAATCCCCACTTTGGCCAGTGAAATCGCACTGTGAACTGAGGATCCCCTTTCCGTCTCGTTATAGCTTTTTTACTCAGCTGAACACTTTACTTTCCATGT 490 12849709 0.794385924 20 483 3738 0.988391376 2.298125005 0.615257048 0.173469388 0.328358209 490 5 2 596 2R:12849659-12849758 6 CG17574 FBtr0306579|FBtr0344926|FBtr0087816|FBtr0306583|FBtr0306580|FBtr0331979|FBtr0306582|FBtr0337029|FBtr0306581 12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356|12849356 12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736|12849736 TCCGTC 6mer3-8 dme-miR-184-3p 2R - 12849670 12849738 stop_codon CG17574 FlyBase G17162.1 GAAATCGCACTGTGAACTGAGGATCCCCTTTCCGTCTCGTTATAGCTTTTTTACTCAGCTGAACACTTT 340 12849709 0.954244996 10 338 2607 0.996062992 2.704150517 0.572834646 0.376470588 0.582677165 340 2 0 506 2R:12849670-12849738 6 398 611 FBgn0033777 586.8266667 68.93 105.5833333 0.678224121 5.773973596 3.769534333 1 1 1 0.25 dme-miR-318-3p 7mer-m8 CCCAGTG 2R 12877548 12877554 - 2R_12877548_12877554_- 0.702148833 0.599962306 0.65105557 0.072256767 Nmda1 FBtr0089878|FBtr0089877|FBtr0309294|FBtr0089875|FBtr0332883|FBtr0089876|FBtr0089873|FBtr0089874|FBtr0309295 12877092|12877092|12877092|12877092|12877092|12877092|12877092|12877092|12877092 12877654|12877654|12877654|12877654|12877654|12877654|12877654|12877654|12877654 2R - 12877420 12877586 3'utr Nmda1 FlyBase G22638.1 ATTGTTGTCGCGTAATCTCATCGGTGTGCTCCCCCAGTGGAGGTAATCTTCAACTAACGAATTACTCAAATACTTACAAATCTATCTACTTCGTGTTGTGTTTGCCCATTTTCCCCGTTTCCTTCTAGTTCTAAATGTCAACTAAGGCTATATGAACTACTTACTTT 42 12877565 0.986632358 23 40 359 0.961538462 1.698970004 0.211538462 0.166666667 0.326923077 42 2 0 50 2R:12877420-12877586 7 Nmda1 FBtr0309295|FBtr0089874|FBtr0089873|FBtr0089876|FBtr0332883|FBtr0089875|FBtr0309294|FBtr0089877|FBtr0089878 12877092|12877092|12877092|12877092|12877092|12877092|12877092|12877092|12877092 12877654|12877654|12877654|12877654|12877654|12877654|12877654|12877654|12877654 CCCAGTG 7mer-m8 dme-miR-318-3p 2R - 12877495 12877595 3'utr Nmda1 FlyBase G17167.1 TACACGAATATTGTTGTCGCGTAATCTCATCGGTGTGCTCCCCCAGTGGAGGTAATCTTCAACTAACGAATTACTCAAATACTTACAAATCTATCTACTTC 23 12877566 0.991751118 8 16 167 0.694444444 0.920818754 0.305555556 0.434782609 0.638888889 23 9 2 25 2R:12877495-12877595 7 10 612 FBgn0013305 2589.41 187.14 285.2633333 0.003861884 0.05343593 0.035055329 11 12 11.5 0.25 dme-bantam-3p 6mer2-7 GATCTC 2R 12924544 12924549 + 2R_12924544_12924549_+ 0.94316552 0.802693182 0.872929351 0.099328916 CG13319 FBtr0087788|FBtr0300890 12924346|12924420 12924664|12924664 2R + 12924513 12924642 5'utr CG13319 FlyBase G15454.2 ACTCTACGCACTCCATCAGCTAACTATCTGGGATCTCCGATTCCCGATCTCCGCTCAGACGTCATGCGGCGGCCGAGTGAGCACGAACTTTAAACGTGTATCGGTGATACGAATTTTGTACAATAAATTT 92 12924540 0.980347566 19 76 578 0.844036697 1.264817823 0.100917431 0.152173913 0.28440367 92 13 4 92 2R:12924513-12924642 6 CG13319 FBtr0300890|FBtr0087788 12924420|12924346 12924664|12924664 GATCTC 6mer2-7 dme-bantam-3p 2R + 12924466 12924653 5'utr CG13319 FlyBase G11726.1 CGTCTATTTCGGGGACCGGCGGCTACCCCACGGACGCAGCTTCACGTACTCTACGCACTCCATCAGCTAACTATCTGGGATCTCCGATTCCCGATCTCCGCTCAGACGTCATGCGGCGGCCGAGTGAGCACGAACTTTAAACGTGTATCGGTGATACGAATTTTGTACAATAAATTTATTGCCCTAAG 94 12924540 0.984274652 21 86 571 0.938356164 1.835690571 0.212328767 0.404255319 0.616438356 94 8 1 137 2R:12924466-12924653 6 38 613 FBgn0033781 91.88 17.2 26.15333333 0.413582934 2.209302326 1.452969666 4 4 4 0.25 dme-miR-14-3p 6mer3-8 AAGACT 2R 12934462 12934467 - 2R_12934462_12934467_- 0.999987293 0.99963123 0.999809262 0.000251801 CG13322 FBtr0087803|FBtr0087804|FBtr0087805 12934232|12934232|12934232 12934751|12934751|12934751 2R - 12934455 12934507 3'utr CG13322 FlyBase G22669.1 CTGGCCGGAGCAACAACGGACGCATTTGTTTATGTAATTAAAGACTTATCGAC 7 12934459 0.962017095 5 6 33 1 1.041392685 0.090909091 0.428571429 0.636363636 7 0 0 11 2R:12934455-12934507 6 CG13322 FBtr0087805|FBtr0087804|FBtr0087803 12934232|12934232|12934232 12934751|12934751|12934751 AAGACT 6mer3-8 dme-miR-14-3p 2R - 12934445 12934476 3'utr CG13322 FlyBase G17189.1 ATGTAATTAAAGACTTATCGACAAGAATTTTG 11 12934470 0.759583719 6 9 68 0.846153846 0.740362689 0.307692308 0.181818182 0.307692308 11 1 1 11 2R:12934445-12934476 6 7.5 614 FBgn0033784 342.93 20 30.73333333 0.021870353 0.375 0.244034707 -8 3 -2.5 0.25 dme-bantam-3p 7mer-m8 TGATCTC 2R 13163108 13163114 + 2R_13163108_13163114_+ 0.319743618 0.529226051 0.424484834 0.148126496 Nrk FBtr0087728 13162649 13163484 2R + 13163098 13163149 3'utr Nrk FlyBase G15511.1 TTATACCCTCTGATCTCTCGATCTCGATCGAATAGTCTGCCACAACGAACGC 17 13163128 0.973396519 6 17 110 1 1.301029996 0.35 0.176470588 0.3 17 0 0 20 2R:13163098-13163149 7 Nrk FBtr0087728 13162649 13163484 TGATCTC 7mer-m8 dme-bantam-3p 2R + 13163099 13163150 3'utr Nrk FlyBase G11767.1 TATACCCTCTGATCTCTCGATCTCGATCGAATAGTCTGCCACAACGAACGCA 11 13163128 0.979659276 4 11 78 1 1.230448921 0.058823529 0.454545455 0.647058824 11 0 0 17 2R:13163099-13163150 7 9 615 FBgn0020391 38.01666667 1.393333333 2.09 0.236738273 6.459330144 4.306220096 -20 -20 -20 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 13163173 13163179 + 2R_13163173_13163179_+ 0.660443266 0.659422784 0.659933025 0.000721602 Nrk FBtr0087728 13162649 13163484 2R + 13163157 13163195 3'utr Nrk FlyBase G15512.1 ACGTCTCGTATCCATATCTAGTCTGTAGATTAAGTTTAT 27 13163180 0.728612195 6 22 282 0.84375 0.954242509 0.0625 0.111111111 0.25 27 3 2 27 2R:13163157-13163195 7 Nrk FBtr0087728 13162649 13163484 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 13163158 13163193 3'utr Nrk FlyBase G11768.1 CGTCTCGTATCCATATCTAGTCTGTAGATTAAGTTT 14 13163180 0.724604605 5 14 138 1 1.278753601 0.105263158 0.285714286 0.473684211 14 0 0 19 2R:13163158-13163193 7 20.5 616 FBgn0020391 38.01666667 1.393333333 2.09 0.539237177 14.71291866 9.80861244 -7 -7 -7 0.25 dme-miR-283-5p 8mer-A1 TGATATTA 2R 13177119 13177126 - 2R_13177119_13177126_- 0.446938871 0.415850111 0.431394491 0.021983101 CG17724 FBtr0339516|FBtr0310499|FBtr0334468|FBtr0087771|FBtr0344197 13176092|13176092|13176551|13176551|13176551 13177352|13177424|13177424|13177424|13177424 2R - 13177089 13177163 3'utr CG17724 FlyBase G22745.2 AGGAATATTAACTCAAACTTAAGCCAAGCTAACTCATTGATATTACCACACTGTTGGATGTGCATACGAAATTTA 96 13177127 0.980161189 8 93 660 0.972222222 1.720159303 0.12962963 0.125 0.222222222 96 2 1 105 2R:13177089-13177163 8 CG17724 FBtr0087771|FBtr0334468|FBtr0310499|FBtr0339516|FBtr0344197 13176551|13176551|13176092|13176092|13176551 13177424|13177424|13177424|13177352|13177424 TGATATTA 8mer-A1 dme-miR-283-5p 2R - 13177095 13177163 3'utr CG17724 FlyBase G17247.1 AGGAATATTAACTCAAACTTAAGCCAAGCTAACTCATTGATATTACCACACTGTTGGATGTGCATACGA 45 13177127 0.979371299 4 44 300 0.984375 1.498310554 0.078125 0.288888889 0.5 45 0 1 63 2R:13177095-13177163 8 65.5 617 FBgn0033802 568.9 19.27666667 29.39333333 0.11513447 3.397890368 2.228396462 1 1 1 0.25 dme-miR-31a-5p 7mer-A1 CTTGCCA 2R 13202654 13202660 + 2R_13202654_13202660_+ 0.652800318 0.586971508 0.619885913 0.046547991 Aats-val FBtr0087735|FBtr0087734|FBtr0333148 13202593|13202593|13202593 13202709|13202709|13202709 2R + 13202631 13202683 3'utr Aats-val FlyBase G15545.1 TAATTGATATTTAGTACGCTTGCCTTGCCAGCTGCTGGGCTTTACTTAAAAAA 16 13202645 0.692754513 9 15 127 0.944444444 1.230448921 0.166666667 0.125 0.222222222 16 1 0 17 2R:13202631-13202683 7 Aats-val FBtr0333148|FBtr0087734|FBtr0087735 13202593|13202593|13202593 13202709|13202709|13202709 CTTGCCA 7mer-A1 dme-miR-31a-5p 2R + 13202629 13202671 3'utr Aats-val FlyBase G11793.1 GGTAATTGATATTTAGTACGCTTGCCTTGCCAGCTGCTGGGCT 8 13202641 0.784879586 6 8 64 1 1.079181246 0.166666667 0.125 0.416666667 8 0 0 12 2R:13202629-13202671 7 11.5 618 FBgn0027079 605.9033333 21.83 33.28 0.018979925 0.526797984 0.345552885 9 13 11 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 2R 13408076 13408082 - 2R_13408076_13408082_- 0.443086576 0.440216384 0.44165148 0.002029538 CG18278 FBtr0087716 13408040 13408169 2R - 13408055 13408134 3'utr CG18278 FlyBase G22804.1 AAAACCAAATTCAAGTCCGCTGGGCGCATATAGATTTCATATTCAGATATCATGTGATTTATGTTGCTATATACATAGTC 31 13408076 0.916453104 13 31 283 1 1.602059991 0.075 0.225806452 0.4 31 0 0 40 2R:13408055-13408134 7 CG18278 FBtr0087716 13408040 13408169 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 13408063 13408097 3'utr CG18278 FlyBase G17296.1 CATATTCAGATATCATGTGATTTATGTTGCTATAT 12 13408076 0.64236075 6 11 115 0.95 1.278753601 0.05 0.5 0.7 12 1 0 19 2R:13408063-13408097 7 18 619 FBgn0033836 254.63 18.40666667 28.13666667 0.070690806 0.977906556 0.639734629 -6 -6 -6 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 2R 13412803 13412809 - 2R_13412803_13412809_- 0.429908381 0.425598741 0.427753561 0.003047418 CG30059 FBtr0087715 13412767 13412896 2R - 13412790 13412861 3'utr CG30059 FlyBase G22812.1 AAAACCAAATTCAAGTCCGCTGGGCGCATATAGATTTCATATTCAGATATCATGTGATTTATGTTGCTATAT 29 13412803 0.94115204 9 26 262 0.894736842 1.531478917 0.026315789 0.275862069 0.447368421 29 4 0 34 2R:13412790-13412861 7 CG30059 FBtr0087715 13412767 13412896 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 13412793 13412849 3'utr CG30059 FlyBase G17301.1 AAGTCCGCTGGGCGCATATAGATTTCATATTCAGATATCATGTGATTTATGTTGCTA 18 13412803 0.665547843 6 14 158 0.80952381 0.929418926 0 0.166666667 0.285714286 18 3 1 17 2R:13412793-13412849 7 17.5 620 FBgn0260475 435.0366667 31.53666667 48.24333333 0.040226494 0.554909629 0.362744421 -6 -6 -6 0.25 dme-bantam-3p 7mer-A1 GATCTCA 2R 13415490 13415496 - 2R_13415490_13415496_- 0.539062789 0.605254349 0.572158569 0.046804459 CG42321 FBtr0299763|FBtr0299755|FBtr0299757|FBtr0299762|FBtr0299761|FBtr0299754|FBtr0299764|FBtr0306698|FBtr0299758|FBtr0299759 13414976|13414976|13414976|13414976|13414976|13414976|13414976|13414976|13414976|13414976 13415517|13415517|13417569|13415517|13415517|13415517|13417569|13415517|13416931|13417569 2R - 13415482 13415519 stop_codon CG42321 FlyBase G22815.1 AAACCGAAAACGATGGGACTCTGGATCTCACGGTGCAC 13 13415498 0.951568484 4 12 57 0.888888889 1.204119983 0.722222222 0.307692308 0.5 13 2 0 16 2R:13415482-13415519 7 CG42321 FBtr0306698|FBtr0299764|FBtr0299762|FBtr0299761|FBtr0299755|FBtr0299759|FBtr0299754|FBtr0299757|FBtr0299758|FBtr0299763 13414976|13414976|13414976|13414976|13414976|13414976|13414976|13414976|13414976|13414976 13415517|13417569|13415517|13415517|13415517|13417569|13415517|13417569|13416931|13415517 GATCTCA 7mer-A1 dme-bantam-3p 2R - 13415470 13415518 stop_codon CG42321 FlyBase G17304.1 AACCGAAAACGATGGGACTCTGGATCTCACGGTGCACATGTATATAGGA 14 13415498 0.966578041 5 13 69 0.947368421 1.255272505 0.421052632 0.357142857 0.526315789 14 1 0 18 2R:13415470-13415518 7 13.5 621 FBgn0259221 191.07 4.566666667 6.95 0.070654734 2.95620438 1.942446043 2 2 2 0.25 dme-miR-14-3p 7mer-m8 AAGACTG 2R 13439843 13439849 - 2R_13439843_13439849_- 0.637637155 0.626056738 0.631846946 0.00818865 cnn FBtr0309891|FBtr0309889|FBtr0100656|FBtr0309893|FBtr0309892|FBtr0087703|FBtr0100654|FBtr0087704 13439312|13439312|13439312|13439312|13439312|13439312|13439312|13439312 13440071|13440071|13440071|13440071|13440071|13440071|13440071|13440071 2R - 13439815 13439867 3'utr cnn FlyBase G22833.1 ATACCCATGCATTTTCTAAAGACTGTTGAGGGAATCGAACCCATTGAATGAAC 72 13439842 0.769312979 8 69 532 0.9625 1.886490725 0.0375 0.111111111 0.2 72 3 0 77 2R:13439815-13439867 7 cnn FBtr0100654|FBtr0087704|FBtr0309892|FBtr0087703|FBtr0100656|FBtr0309893|FBtr0309891|FBtr0309889 13439312|13439312|13439312|13439312|13439312|13439312|13439312|13439312 13440071|13440071|13440071|13440071|13440071|13440071|13440071|13440071 AAGACTG 7mer-m8 dme-miR-14-3p 2R - 13439765 13439869 3'utr cnn FlyBase G17320.1 AAATACCCATGCATTTTCTAAAGACTGTTGAGGGAATCGAACCCATTGAATGAACTATCACACACACACACACACACACCTGTTTTAAGCACAAAACGAAACTAA 64 13439842 0.980833802 8 61 433 0.958333333 1.662757832 0.072916667 0.390625 0.59375 64 3 1 92 2R:13439765-13439869 7 60 622 FBgn0013765 2282.81 64.11 98.51 0.026283396 0.935891437 0.609075221 -7 -7 -7 0.25 dme-miR-307a-3p 7mer-A1 GTTGTGA 2R 13453361 13453367 + 2R_13453361_13453367_+ 0.538281778 0.490834834 0.514558306 0.033550095 cbs FBtr0087666|FBtr0309886|FBtr0309887 13453210|13453210|13453210 13453393|13453393|13453393 2R + 13453345 13453384 3'utr cbs FlyBase G15585.2 AGTATTTATTTCTACCGTTGTGATTTTTATAATAAACTAA 53 13453369 0.62152229 7 49 599 0.958333333 1.361727836 0 0.283018868 0.472222222 53 1 2 69 2R:13453345-13453384 7 cbs FBtr0309886|FBtr0309887|FBtr0087666 13453210|13453210|13453210 13453393|13453393|13453393 GTTGTGA 7mer-A1 dme-miR-307a-3p 2R + 13453345 13453385 3'utr cbs FlyBase G11826.1 AGTATTTATTTCTACCGTTGTGATTTTTATAATAAACTAAC 39 13453370 0.666561879 6 36 461 0.905660377 1.204119983 0 0.307692308 0.490566038 39 3 2 48 2R:13453345-13453385 7 45.5 623 FBgn0086757 496.6633333 26.83333333 41.18333333 0.091611353 1.695652174 1.104815864 -8 -9 -8.5 0.25 dme-miR-7-5p 6mer3-8 GTCTTC 2R 13453888 13453893 - 2R_13453888_13453893_- 0.712015545 0.999608875 0.85581221 0.203359243 arr FBtr0087702 13453638 13454435 2R - 13453874 13453929 3'utr arr FlyBase G22845.1 TGAAGCAATATTGACGAATATGCGACTAATTGAACTGTCTTCTTAATTGTTATAAA 8 13453910 0.974292148 5 7 50 1 0.954242509 0.444444444 0.125 0.222222222 8 0 0 9 2R:13453874-13453929 6 arr FBtr0087702 13453638 13454435 GTCTTC 6mer3-8 dme-miR-7-5p 2R - 13453843 13453920 3'utr arr FlyBase G17329.1 ATTGACGAATATGCGACTAATTGAACTGTCTTCTTAATTGTTATAAACACCAAAAAGTGCCTCATTAATACGTGTGTT 10 13453900 0.980594262 8 10 74 1 1.113943352 0.153846154 0.3 0.461538462 10 0 0 13 2R:13453843-13453920 6 4 624 FBgn0000119 295 5.866666667 8.943333333 0.013559322 0.681818182 0.447260529 17 7 12 0.25 dme-miR-283-5p 7mer-A1 GATATTA 2R 13495322 13495328 - 2R_13495322_13495328_- 0.597325871 0.605369005 0.601347438 0.005687331 drk FBtr0087696|FBtr0087697|FBtr0087698 13495220|13495220|13495220 13496977|13496977|13496977 2R - 13495316 13495355 3'utr drk FlyBase G22881.1 AATAAAGCAGGCAATTGACAAGGTTTAGATATTAACTAAC 38 13495331 0.937114394 3 38 233 1 1.662757832 0.130434783 0.131578947 0.282608696 38 0 0 46 2R:13495316-13495355 7 drk FBtr0087698|FBtr0087696|FBtr0087697 13495220|13495220|13495220 13496977|13496977|13496977 GATATTA 7mer-A1 dme-miR-283-5p 2R - 13495316 13495352 3'utr drk FlyBase G17359.1 AAAGCAGGCAATTGACAAGGTTTAGATATTAACTAAC 31 13495331 0.703441228 2 31 151 1 1.633468456 0.069767442 0.35483871 0.534883721 31 0 0 43 2R:13495316-13495352 7 34.5 625 FBgn0004638 2373.316667 149.8733333 229.7333333 0.014536619 0.230194386 0.150174115 3 3 3 0.25 dme-miR-980-3p 6mer3-8 GGCAGC 2R 13496891 13496896 - 2R_13496891_13496896_- 0.999965177 0.999992844 0.99997901 1.95E-05 drk FBtr0087695|FBtr0087696|FBtr0087697|FBtr0087694|FBtr0087698 13496439|13495220|13495220|13496764|13495220 13496977|13496977|13496977|13496977|13496977 2R - 13496866 13496923 3'utr drk FlyBase G22889.1 AAACACAACACACACCCATAACGATTAGGCAGCATTATCAGCAATTGCGAATAACAAC 40 13496898 0.946402215 7 38 166 0.955555556 1.633468456 0.022222222 0.1 0.2 40 2 0 43 2R:13496866-13496923 6 drk FBtr0087694|FBtr0087698|FBtr0087696|FBtr0087697|FBtr0087695 13496764|13495220|13495220|13495220|13496439 13496977|13496977|13496977|13496977|13496977 GGCAGC 6mer3-8 dme-miR-980-3p 2R - 13496868 13496919 3'utr drk FlyBase G17366.1 ACAACACACACCCATAACGATTAGGCAGCATTATCAGCAATTGCGAATAACA 27 13496898 0.941129823 6 27 127 1 1.662757832 0.065217391 0.555555556 0.739130435 27 0 0 46 2R:13496868-13496919 6 29.5 626 FBgn0004638 2373.316667 149.8733333 229.7333333 0.012429863 0.196832881 0.12840975 2 2 2 0.25 dme-miR-252-5p 7mer-m8 GTACTTA 2R 13580891 13580897 - 2R_13580891_13580897_- 0.575750048 0.544278981 0.560014514 0.022253358 CG6191 FBtr0330617|FBtr0087678 13580311|13580584 13580990|13580990 2R - 13580885 13580924 stop_codon CG6191 FlyBase G22914.2 CGCAAGGGCAGTCGCAAGTAGGCGTTCGTACTTATAGCAT 34 13580900 0.775550217 7 24 205 0.789473684 1.176091259 0.210526316 0.117647059 0.210526316 34 7 1 30 2R:13580885-13580924 7 CG6191 FBtr0330617|FBtr0087678 13580311|13580584 13580990|13580990 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 13580868 13580922 stop_codon CG6191 FlyBase G17390.1 CAAGGGCAGTCGCAAGTAGGCGTTCGTACTTATAGCATACTTTCGGGTGTTGGGT 13 13580900 0.985075084 3 11 91 0.8 1.204119983 0 0.461538462 0.65 13 4 0 16 2R:13580868-13580922 7 22.5 627 FBgn0027581 566.66 18.94333333 29.07333333 0.039706349 1.187752947 0.773905068 3 3 3 0.25 dme-miR-932-5p 7mer-A1 GAATTGA 2R 13820064 13820070 - 2R_13820064_13820070_- 0.781229092 0.814248403 0.797738747 0.023348171 fl(2)d FBtr0304697|FBtr0304696|FBtr0087647|FBtr0087648 13819622|13819622|13819622|13819622 13820154|13820154|13820154|13820154 2R - 13820002 13820184 stop_codon fl(2)d FlyBase G22925.1 GGCAGCGGAGCAGTCGACTACTCCACCTAAGCGCTGGCGAACCTTTTTCCAAAAAAGGGTGCACTCCATATGAGTTCGTCAAATTGATCGTTAATTCCTGACGTTTACTTTTGTGAATTGAGATTTCAAAACAGAGAGAGACTTCATTTTATATTTCTAACCTATCTTTTAGATTCTTTAATT 65 13820067 0.982831166 25 62 470 0.95 1.579783597 0.325 0.215384615 0.3625 65 3 1 76 2R:13820002-13820184 7 fl(2)d FBtr0087647|FBtr0087648|FBtr0304697|FBtr0304696 13819622|13819622|13819622|13819622 13820154|13820154|13820154|13820154 GAATTGA 7mer-A1 dme-miR-932-5p 2R - 13820010 13820174 stop_codon fl(2)d FlyBase G17396.1 CAGTCGACTACTCCACCTAAGCGCTGGCGAACCTTTTTCCAAAAAAGGGTGCACTCCATATGAGTTCGTCAAATTGATCGTTAATTCCTGACGTTTACTTTTGTGAATTGAGATTTCAAAACAGAGAGAGACTTCATTTTATATTTCTAACCTATCTTTTAGATT 58 13820067 0.986484706 21 56 478 0.97826087 1.954242509 0.239130435 0.448275862 0.652173913 58 2 0 90 2R:13820010-13820174 7 29 628 FBgn0000662 1153.03 55.06666667 84.32666667 0.025151124 0.526634383 0.343900704 -3 -3 -3 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 13863458 13863463 + 2R_13863458_13863463_+ 0.798746861 0.517989744 0.658368303 0.19852532 CG13344 FBtr0087586|FBtr0087586|FBtr0087586|FBtr0339953|FBtr0339953|FBtr0339953 13863344|13863344|13863344|13863344|13863344|13863344 13864156|13864156|13864156|13863579|13863579|13863579 2R + 13863433 13863491 3'utr CG13344 FlyBase G15662.1 AGGTTTAGTTTTATGAGGCGCACTTCTGTGACTTTGTTTGTGTTCGTACGTTCGTATAT 54 13863467 0.814667431 10 53 463 0.984375 1.799340549 0.3125 0.166666667 0.296875 54 1 0 63 2R:13863433-13863491 6 CG13344 FBtr0339953|FBtr0339953|FBtr0339953|FBtr0087586|FBtr0087586|FBtr0087586 13863344|13863344|13863344|13863344|13863344|13863344 13863579|13863579|13863579|13864156|13864156|13864156 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 13863439 13863489 3'utr CG13344 FlyBase G11878.1 AGTTTTATGAGGCGCACTTCTGTGACTTTGTTTGTGTTCGTACGTTCGTAT 37 13863467 0.615195605 9 33 319 0.886792453 1.194976603 0.339622642 0.378378378 0.566037736 37 4 2 47 2R:13863439-13863489 6 26 629 FBgn0033884 128.6733333 8.203333333 12.55333333 0.202062069 3.169443316 2.071163038 -9 -9 -9 0.25 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 13863471 13863477 + 2R_13863471_13863477_+ 0.443174893 0.466079746 0.45462732 0.016196139 CG13344 FBtr0087586|FBtr0339953 13863344|13863344 13864156|13863579 2R + 13863433 13863491 3'utr CG13344 FlyBase G15662.1 AGGTTTAGTTTTATGAGGCGCACTTCTGTGACTTTGTTTGTGTTCGTACGTTCGTATAT 54 13863467 0.814667431 10 53 463 0.984375 1.799340549 0.3125 0.166666667 0.296875 54 1 0 63 2R:13863433-13863491 7 CG13344 FBtr0339953|FBtr0087586 13863344|13863344 13863579|13864156 TGTGTTC 7mer-m8 dme-miR-317-3p 2R + 13863439 13863489 3'utr CG13344 FlyBase G11878.1 AGTTTTATGAGGCGCACTTCTGTGACTTTGTTTGTGTTCGTACGTTCGTAT 37 13863467 0.615195605 9 33 319 0.886792453 1.194976603 0.339622642 0.378378378 0.566037736 37 4 2 47 2R:13863439-13863489 7 4 630 FBgn0033884 128.6733333 8.203333333 12.55333333 0.031086472 0.487606664 0.318640467 4 4 4 0.25 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2R 13863903 13863910 + 2R_13863903_13863910_+ 0.622763814 0.623635656 0.623199735 0.000616526 CG13344 FBtr0087586 13863344 13864156 2R + 13863815 13863940 3'utr CG13344 FlyBase G15665.1 AACCCCCTCTGGCAGCCCATAGCACAAAGAAACGTATGAACCCAGCTTGTACTTGAGTTAGTTGGATGATTAAAGTTGAAGCGGCATTTCTAGTCAGTAAATGGTGGTCAGAATAGAGGGAACGTA 137 13863902 0.977503484 11 134 886 0.9625 2.187520721 0.0875 0.145985401 0.26875 137 6 0 154 2R:13863815-13863940 8 CG13344 FBtr0087586 13863344 13864156 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R + 13863886 13863980 3'utr CG13344 FlyBase G11881.1 AAAGTTGAAGCGGCATTTCTAGTCAGTAAATGGTGGTCAGAATAGAGGGAACGTAGAAGGAGGAGGAGGAGGAGGAGTAACCCCGATACAGGGCA 70 13863902 0.972006182 8 66 393 0.97 1.685741739 0.2 0.371428571 0.56 70 2 1 97 2R:13863886-13863980 8 97 631 FBgn0033884 128.6733333 8.203333333 12.55333333 0.753846951 11.8244616 7.727031333 1 1 1 0.25 dme-bantam-3p 6mer3-8 TGATCT 2R 13943680 13943685 - 2R_13943680_13943685_- 0.797675543 0.875586328 0.836630935 0.055091255 AGO1 FBtr0305592 13943385 13947971 2R - 13943618 13943697 3'utr AGO1 FlyBase G23018.1 AATGAAAGTTGATGATCTTTTCGATATAATTCTGTCAAGCTGTCTTAACAATTAGTTATAAGCGCTTCAATACAAGAAAC 20 13943678 0.855237785 8 20 165 1 1.414973348 0.115384615 0.15 0.346153846 20 0 0 26 2R:13943618-13943697 6 AGO1 FBtr0305592 13943385 13947971 TGATCT 6mer3-8 dme-bantam-3p 2R - 13943619 13943727 3'utr AGO1 FlyBase G17447.1 CAAAATGCGAGTTTGTGAAATATGCAATTTAATGAAAGTTGATGATCTTTTCGATATAATTCTGTCAAGCTGTCTTAACAATTAGTTATAAGCGCTTCAATACAAGAAA 16 13943679 0.985238221 7 14 124 0.923076923 1.380211242 0.192307692 0.3125 0.576923077 16 2 0 24 2R:13943619-13943727 6 10.5 632 FBgn0262739 6339.806667 111.4333333 171.8633333 0.001656202 0.094226742 0.061095056 -7 -6 -6.5 0.25 dme-bantam-3p 6mer3-8 TGATCT 2R 13943883 13943888 - 2R_13943883_13943888_- 0.999806333 0.917013353 0.958409843 0.058543421 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 2R - 13943866 13943930 3'utr AGO1 FlyBase G23020.1 AAGCAACGTGAGCAACGTAATATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGT 37 13943890 0.86445956 12 34 389 0.886363636 1.591064607 0.159090909 0.162162162 0.295454545 37 5 0 39 2R:13943866-13943930 6 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 TGATCT 6mer3-8 dme-bantam-3p 2R - 13943864 13943921 3'utr AGO1 FlyBase G17448.1 GAGCAACGTAATATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTAA 27 13943890 0.987717694 10 26 285 0.975 1.591064607 0.25 0.296296296 0.525 27 1 0 39 2R:13943864-13943921 6 29 633 FBgn0262739 6339.806667 111.4333333 171.8633333 0.004574272 0.260245289 0.168738727 2 2 2 0.25 dme-miR-305-3p 8mer-m1 ATGTGCCG 2R 13944588 13944595 - 2R_13944588_13944595_- 0.6287037 0.626414418 0.627559059 0.00161878 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 2R - 13944563 13944608 3'utr AGO1 FlyBase G23026.1 ATATTACTTATAAATGTGCCGTTTATAGATGTCTACAATTATATAC 17 13944593 0.738681045 6 16 164 1 1.255272505 0 0.058823529 0.111111111 17 0 0 18 2R:13944563-13944608 8 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 ATGTGCCG 8mer-m1 dme-miR-305-3p 2R - 13944560 13944605 3'utr AGO1 FlyBase G17453.1 TTACTTATAAATGTGCCGTTTATAGATGTCTACAATTATATACAAC 6 13944584 0.982702537 4 6 52 1 1 0.3 0.5 0.7 6 0 0 10 2R:13944560-13944605 8 9.5 634 FBgn0262739 6339.806667 111.4333333 171.8633333 0.001498468 0.085252767 0.055276479 -2 -11 -6.5 0.25 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 13944733 13944739 - 2R_13944733_13944739_- 0.794363971 0.802775844 0.798569907 0.005948041 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 2R - 13944714 13944832 3'utr AGO1 FlyBase G23027.1 TATGTTCTGCTCAGAGGCAAGGCCCAAATAAAAAGACAAAAAGCCGGGATATCCAAATGGGAACTTACATTTTTATCTGTCAAAATTCAATTGAGCTTTAAACTAAAGATAGATCGAGA 158 13944741 0.976271152 12 150 963 0.945054945 2.235528447 0.027472527 0.120253165 0.236263736 158 10 0 172 2R:13944714-13944832 7 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 AGCTTTA 7mer-A1 dme-miR-79-3p 2R - 13944708 13944758 3'utr AGO1 FlyBase G17454.1 ATCTGTCAAAATTCAATTGAGCTTTAAACTAAAGATAGATCGAGAAAAAAC 52 13944741 0.805553155 3 49 371 0.927536232 1.806179974 0 0.288461538 0.463768116 52 5 0 64 2R:13944708-13944758 7 79.5 635 FBgn0262739 6339.806667 111.4333333 171.8633333 0.012539815 0.71343105 0.462576854 2 2 2 0.25 dme-miR-1003-3p 7mer-m8 ATGTGAG 2R 13946084 13946090 - 2R_13946084_13946090_- 0.670690166 0.670554431 0.670622299 9.60E-05 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 2R - 13945974 13946162 3'utr AGO1 FlyBase G23034.1 CATCCTTCTTCACAGAACCTTTAATTTAGATTTAGTTTCCAAGTTTGCAAGCTGTTTTGCCAATCGTACATTATGTGAGCATTATAAAATACATAATATATATAAATCTATATGCTTATATTTAATCATTTACTGCACTTACAAATTAGTTGGTAATCCTCAAGAATATATGTATAAAGAAAAAAAGGG 88 13946090 0.940822388 37 76 698 0.900990099 1.356981401 0.108910891 0.125 0.237623762 88 7 3 91 2R:13945974-13946162 7 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 ATGTGAG 7mer-m8 dme-miR-1003-3p 2R - 13945981 13946170 3'utr AGO1 FlyBase G17459.1 ATTGTATACATCCTTCTTCACAGAACCTTTAATTTAGATTTAGTTTCCAAGTTTGCAAGCTGTTTTGCCAATCGTACATTATGTGAGCATTATAAAATACATAATATATATAAATCTATATGCTTATATTTAATCATTTACTGCACTTACAAATTAGTTGGTAATCCTCAAGAATATATGTATAAAGAAA 62 13946106 0.984202686 24 56 504 0.904255319 1.452297671 0.042553191 0.338709677 0.563829787 62 7 2 85 2R:13945981-13946170 7 19 636 FBgn0262739 6339.806667 111.4333333 171.8633333 0.002996937 0.170505534 0.110552959 0 16 8 0.25 dme-miR-999-3p 8mer-A1 AGTTAACA 2R 13946251 13946258 - 2R_13946251_13946258_- 0.623081195 0.643925818 0.633503507 0.014739358 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 2R - 13946182 13946304 3'utr AGO1 FlyBase G23034.2 ATGAAACGTATGCTTAGTAATTGTACTATATCGAGGACACAGTTCAAGTTAACATTATAATGAGTTGTTATTTATGCGGCGCGGGCGACGACGTTCTATCCACTCGGAATCGCCCGGGCCAAA 56 13946257 0.870147467 19 48 301 0.919354839 1.755874856 0.290322581 0.071428571 0.161290323 56 5 0 57 2R:13946182-13946304 8 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 AGTTAACA 8mer-A1 dme-miR-999-3p 2R - 13946214 13946293 3'utr AGO1 FlyBase G17460.1 GCTTAGTAATTGTACTATATCGAGGACACAGTTCAAGTTAACATTATAATGAGTTGTTATTTATGCGGCGCGGGCGACGA 39 13946255 0.98507182 11 29 236 0.745454545 0.913813852 0.418181818 0.358974359 0.545454545 39 10 4 41 2R:13946214-13946293 8 26 637 FBgn0262739 6339.806667 111.4333333 171.8633333 0.004101071 0.233323362 0.151282996 -1 -3 -2 0.25 dme-miR-988-3p 8mer-A1 ACAAGGGA 2R 13946936 13946943 - 2R_13946936_13946943_- 0.474818572 0.568802252 0.521810412 0.066456512 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 2R - 13946860 13947264 3'utr AGO1 FlyBase G23037.1 ACAGCAAACACCACATGAACACCAACCACTCGGATTCTCTGTACTGTGAACGAAGACCACCACCAAAATATAAACAAAAACCACAAGCGACATTAAAGCGACAAGCATTGAAAGAGTGTGTAGACACAACTTAGCATGTACTAATGAATTACTTCAATACTTCAACTAGGGCGCTGACAAAACCAAGCAAGAACATTTAATAGTTTGTAAGTTGGGCTCTACCAAAAACCGAACACAAAATGAGAGAGAGAGAGAGAGAGAAAAATGCAAGCAAGGCCAGATAAGTTAAGTGGGCAATGAATAACGAGAACTGCAATTTCAACAAGGGACAAACTTTTGGTCAAAACAATAGCTATACTTATAGAGCAGAGCCTAATATATACATACATAATTAGAATCTAAAAC 268 13946947 0.999995042 55 250 1217 0.938110749 1.681241237 0.182410423 0.130597015 0.241042345 268 14 5 288 2R:13946860-13947264 8 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 ACAAGGGA 8mer-A1 dme-miR-988-3p 2R - 13946845 13947073 3'utr AGO1 FlyBase G17462.1 AACATTTAATAGTTTGTAAGTTGGGCTCTACCAAAAACCGAACACAAAATGAGAGAGAGAGAGAGAGAGAAAAATGCAAGCAAGGCCAGATAAGTTAAGTGGGCAATGAATAACGAGAACTGCAATTTCAACAAGGGACAAACTTTTGGTCAAAACAATAGCTATACTTATAGAGCAGAGCCTAATATATACATACATAATTAGAATCTAAAACTAAAATTTAAAGTTT 142 13946947 0.947976752 26 132 504 0.932126697 1.614897216 0.221719457 0.401408451 0.615384615 142 11 4 206 2R:13946845-13947073 8 56 638 FBgn0262739 6339.806667 111.4333333 171.8633333 0.008833077 0.502542626 0.325840299 4 4 4 0.25 dme-miR-14-3p 6mer3-8 AAGACT 2R 13973086 13973091 - 2R_13973086_13973091_- 0.54262604 0.646152269 0.594389155 0.073204149 CG6701 FBtr0339957|FBtr0303991|FBtr0303990|FBtr0303989 13972982|13972982|13972982|13972982 13973652|13973652|13973652|13973652 2R - 13973033 13973129 3'utr CG6701 FlyBase G23078.1 AAGTAAAAACTTGCTGACTCCTTGTGTCATCGGTTCTGAAGACTTGAAACAATTTGACAATGTAGAAAACAATATGTATATGCCCGACAAACTATTT 24 13973093 0.975000055 11 23 150 1 1.505149978 0.15625 0.291666667 0.46875 24 0 0 32 2R:13973033-13973129 6 CG6701 FBtr0303990|FBtr0303989|FBtr0339957|FBtr0303991 13972982|13972982|13972982|13972982 13973652|13973652|13973652|13973652 AAGACT 6mer3-8 dme-miR-14-3p 2R - 13973080 13973107 3'utr CG6701 FlyBase G17496.1 TGTGTCATCGGTTCTGAAGACTTGAAAC 5 13973093 0.794693685 2 5 35 1 0.84509804 0.428571429 0.4 0.571428571 5 0 0 7 2R:13973080-13973107 6 10 639 FBgn0033889 5221.26 120.4433333 183.47 0.001915247 0.083026596 0.054504824 2 2 2 0.25 dme-miR-1012-3p 6mer3-8 TTGACT 2R 13973565 13973570 - 2R_13973565_13973570_- 0.51817813 0.416486386 0.467332258 0.071906891 CG6701 FBtr0339957|FBtr0303991|FBtr0303990|FBtr0303989 13972982|13972982|13972982|13972982 13973652|13973652|13973652|13973652 2R - 13973514 13973623 3'utr CG6701 FlyBase G23080.1 CTATAGGGACAACGTGATTGCTTGGCCGAACAAGTGATCTCGCTGTCCTCTTTTTGACTTTGCTATTGGCATTTGTGCGATCTGCGATCATCCATGCGCCAAGTAGCAAA 35 13973589 0.985100945 13 33 265 0.930232558 1.602059991 0.139534884 0.228571429 0.372093023 35 3 0 40 2R:13973514-13973623 6 CG6701 FBtr0303990|FBtr0303989|FBtr0339957|FBtr0303991 13972982|13972982|13972982|13972982 13973652|13973652|13973652|13973652 TTGACT 6mer3-8 dme-miR-1012-3p 2R - 13973552 13973622 3'utr CG6701 FlyBase G17500.1 TATAGGGACAACGTGATTGCTTGGCCGAACAAGTGATCTCGCTGTCCTCTTTTTGACTTTGCTATTGGCAT 22 13973563 0.874786682 6 19 149 0.870967742 1.431363764 0.032258065 0.318181818 0.516129032 22 4 0 27 2R:13973552-13973622 6 8.5 640 FBgn0033889 5221.26 120.4433333 183.47 0.00162796 0.070572607 0.0463291 19 -7 6 0.25 dme-miR-33-5p 7mer-A1 AATGCAA 2R 13985083 13985089 - 2R_13985083_13985089_- 0.782558097 0.782863725 0.782710911 0.000216092 RN-tre FBtr0087603|FBtr0330626|FBtr0330627 13984813|13984813|13984813 13985779|13985779|13985596 2R - 13985051 13985134 3'utr RN-tre FlyBase G23115.1 GTACCAAACAAAATACAAAGCAACGTTAAAAAGTTACGTCCATGAAATGCAAACGAATGTAAAGGCGAAAGGCAACCAAATATT 45 13985101 0.960432982 8 42 207 0.941176471 1.681241237 0.176470588 0.133333333 0.235294118 45 3 0 48 2R:13985051-13985134 7 RN-tre FBtr0330626|FBtr0330627|FBtr0087603 13984813|13984813|13984813 13985779|13985596|13985779 AATGCAA 7mer-A1 dme-miR-33-5p 2R - 13985031 13985121 3'utr RN-tre FlyBase G17524.1 TACAAAGCAACGTTAAAAAGTTACGTCCATGAAATGCAAACGAATGTAAAGGCGAAAGGCAACCAAATATTAATTGAAAACTATAGATAAC 35 13985101 0.957442506 7 35 166 1 1.748188027 0.25 0.514285714 0.696428571 35 0 0 56 2R:13985031-13985121 7 29 641 FBgn0020620 1475.656667 67.63 103.75 0.019652268 0.428803785 0.279518072 12 12 12 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 13986572 13986579 - 2R_13986572_13986579_- 0.494777857 0.454001392 0.474389624 0.02883334 RN-tre FBtr0087605 13986424 13987040 2R - 13986531 13986622 3'utr RN-tre FlyBase G23118.1 TACTAGCATAAACCAACTGATTAGGTAACTTAAGCTTTGCTCTTGCATTTACTTTATATTTGCATTACAAACAAAACTCAACTTTTAGTTTA 24 13986580 0.869135622 11 24 204 1 1.462397998 0.068965517 0.208333333 0.344827586 24 0 0 29 2R:13986531-13986622 8 RN-tre FBtr0087605 13986424 13987040 TGCATTTA 8mer-A1 dme-miR-277-3p 2R - 13986566 13986621 3'utr RN-tre FlyBase G17529.1 ACTAGCATAAACCAACTGATTAGGTAACTTAAGCTTTGCTCTTGCATTTACTTTAT 23 13986580 0.952413798 6 21 211 0.896551724 1.414973348 0.103448276 0.260869565 0.413793103 23 3 0 26 2R:13986566-13986621 8 13.5 642 FBgn0020620 1475.656667 67.63 103.75 0.009148469 0.199615555 0.130120482 1 1 1 0.25 dme-miR-252-5p 8mer-m1 GTACTTAG 2R 13986882 13986889 - 2R_13986882_13986889_- 0.591874739 0.601268984 0.596571862 0.006642773 RN-tre FBtr0087605 13986424 13987040 2R - 13986850 13986910 3'utr RN-tre FlyBase G23120.1 ATTCGGTAGTAATATCCACATGTACTTAGCTTTAATTTTTGTATTGTCGAACCGACAGAAA 13 13986889 0.989089527 4 13 123 1 1.255272505 0 0.230769231 0.444444444 13 0 0 18 2R:13986850-13986910 8 RN-tre FBtr0087605 13986424 13987040 GTACTTAG 8mer-m1 dme-miR-252-5p 2R - 13986843 13986909 3'utr RN-tre FlyBase G17530.1 TTCGGTAGTAATATCCACATGTACTTAGCTTTAATTTTTGTATTGTCGAACCGACAGAAACCTGAAA 10 13986890 0.98649581 3 10 90 1 1.176091259 0 0.4 0.6 10 0 0 15 2R:13986843-13986909 8 11 643 FBgn0020620 1475.656667 67.63 103.75 0.007454308 0.162649712 0.106024096 0 1 0.5 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 14058480 14058487 + 2R_14058480_14058487_+ 0.495110812 0.495490365 0.495300589 0.000268418 mam FBtr0339956|FBtr0087597|FBtr0087596 14057913|14057913|14057913 14060356|14060356|14058697 2R + 14058442 14058492 3'utr mam FlyBase G15706.1 TACAGATACTACAGACTCGTTGTGCAACTTAAGCACTTGTACTTAATGCAA 12 14058479 0.982339257 4 12 91 1 1.079181246 0.083333333 0 0 12 0 0 12 2R:14058442-14058492 8 mam FBtr0087596|FBtr0339956|FBtr0087597 14057913|14057913|14057913 14058697|14060356|14060356 GTACTTAA 8mer-A1 dme-miR-252-5p 2R + 14058442 14058492 3'utr mam FlyBase G11914.1 TACAGATACTACAGACTCGTTGTGCAACTTAAGCACTTGTACTTAATGCAA 7 14058479 0.980313255 3 7 52 1 1 0 0.285714286 0.5 7 0 0 10 2R:14058442-14058492 8 8 644 FBgn0002643 1627.19 27.33666667 41.79333333 0.004916451 0.292647238 0.191418089 1 1 1 0.25 dme-miR-33-5p 7mer-A1 AATGCAA 2R 14060560 14060566 - 2R_14060560_14060566_- 0.748999407 0.780368266 0.764683837 0.022181162 Prosap FBtr0339764 14060454 14062325 2R - 14060499 14060593 3'utr Prosap FlyBase G23139.1 AGCACACACCACCACACATACACTTTAAATGCAAGTATTTCAAATGGAATAATACGGAAATATATATCATAAGTCGTAAAATATGCAATTATGTA 11 14060575 0.974862043 8 11 61 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 2R:14060499-14060593 7 Prosap FBtr0339764 14060454 14062325 AATGCAA 7mer-A1 dme-miR-33-5p 2R - 14060535 14060578 3'utr Prosap FlyBase G17542.1 ACATACACTTTAAATGCAAGTATTTCAAATGGAATAATACGGAA 5 14060568 0.966030999 3 5 27 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2R:14060535-14060578 7 4.5 645 FBgn0040752 4396.62 61.27 94.33 0.001023514 0.073445406 0.047704866 9 2 5.5 0.25 dme-miR-12-5p 6mer2-7 ATACTC 2R 14060911 14060916 - 2R_14060911_14060916_- 0.983232318 0.749158028 0.866195173 0.165515525 Prosap FBtr0339764 14060454 14062325 2R - 14060860 14060930 3'utr Prosap FlyBase G23141.1 CGAGAATATATTGGATACTCTAGCGTATAACTAGATTTTAGCACACTTTTTAGTTCTCGCAATAGTTGCTA 12 14060920 0.633801613 7 11 99 0.923076923 1.079181246 0.076923077 0.083333333 0.153846154 12 1 0 12 2R:14060860-14060930 6 Prosap FBtr0339764 14060454 14062325 ATACTC 6mer2-7 dme-miR-12-5p 2R - 14060847 14060930 3'utr Prosap FlyBase G17544.1 CGAGAATATATTGGATACTCTAGCGTATAACTAGATTTTAGCACACTTTTTAGTTCTCGCAATAGTTGCTAATTATTTGTAAAT 19 14060920 0.787895924 9 17 143 0.958333333 1.361727836 0.5 0.263157895 0.416666667 19 1 0 23 2R:14060847-14060930 6 8.5 646 FBgn0040752 4396.62 61.27 94.33 0.001933303 0.138730211 0.090109191 4 4 4 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 14062073 14062079 - 2R_14062073_14062079_- 0.676955687 0.660965619 0.668960653 0.011306708 Prosap FBtr0339765|FBtr0339765|FBtr0339765|FBtr0339763|FBtr0339763|FBtr0339763|FBtr0087601|FBtr0087601|FBtr0087601|FBtr0339764|FBtr0339764|FBtr0339764 14061497|14061497|14061497|14061497|14061497|14061497|14061497|14061497|14061497|14060454|14060454|14060454 14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325 2R - 14062041 14062100 3'utr Prosap FlyBase G23151.1 ACTTTTATTATATTTATTGCGTGTGATATAAATTTATGCAAGCTGCCCGCGAGCAGCAAC 131 14062086 0.992824521 11 122 1457 0.91875 1.565257343 0.05 0.20610687 0.35 131 10 3 147 2R:14062041-14062100 7 Prosap FBtr0087601|FBtr0087601|FBtr0087601|FBtr0339764|FBtr0339764|FBtr0339764|FBtr0339765|FBtr0339765|FBtr0339765|FBtr0339763|FBtr0339763|FBtr0339763 14061497|14061497|14061497|14060454|14060454|14060454|14061497|14061497|14061497|14061497|14061497|14061497 14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325|14062325 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 14062040 14062135 3'utr Prosap FlyBase G17553.1 GAATTAGAATTTTCTTGATTTCGAAATCTTAAGTTACTTTTATTATATTTATTGCGTGTGATATAAATTTATGCAAGCTGCCCGCGAGCAGCAACT 95 14062086 0.992747966 14 87 1022 0.905109489 2.093421685 0.051094891 0.336842105 0.540145985 95 13 0 124 2R:14062040-14062135 7 105 647 FBgn0040752 4396.62 61.27 94.33 0.023881982 1.71372613 1.113113538 7 7 7 0.25 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 14166705 14166712 + 2R_14166705_14166712_+ 0.60452031 0.600715591 0.602617951 0.002690329 CG8323 FBtr0087521 14166669 14166991 2R + 14166653 14166715 stop_codon CG8323 FlyBase G15738.1 AAGTATAGTAATCAATGACCCCAAAGATCACTGGCTAGGTAGCATTAATTTAAGTACAAAATT 5 14166702 0.987759734 4 5 34 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2R:14166653-14166715 8 CG8323 FBtr0087521 14166669 14166991 AGTACAAA 8mer-A1 dme-miR-305-5p 2R + 14166675 14166718 3'utr CG8323 FlyBase G11935.1 AAAGATCACTGGCTAGGTAGCATTAATTTAAGTACAAAATTGTT 6 14166702 0.984168723 3 6 53 1 0.954242509 0 0.5 0.666666667 6 0 0 9 2R:14166675-14166718 8 4 648 FBgn0033903 176.6666667 14.75333333 22.46333333 0.022641509 0.271125169 0.178067963 3 3 3 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 14215232 14215239 - 2R_14215232_14215239_- 0.435415024 0.458809618 0.447112321 0.01654248 RpS23 FBtr0087575 14215094 14215434 2R - 14215216 14215280 3'utr RpS23 FlyBase G23204.1 GAATATAGTGATTCCAATCGATTCTGTTTTATAAGGCCGATGTACTTAATGAGTTACATACTTGC 48 14215240 0.984389598 9 44 342 0.909090909 1.397940009 0.2 0.145833333 0.254545455 48 4 1 50 2R:14215216-14215280 8 RpS23 FBtr0087575 14215094 14215434 GTACTTAA 8mer-A1 dme-miR-252-5p 2R - 14215184 14215267 3'utr RpS23 FlyBase G17590.1 CCAATCGATTCTGTTTTATAAGGCCGATGTACTTAATGAGTTACATACTTGCATATTTAAACTATAACAGTTTACAGTTTTCGT 30 14215240 0.988945282 7 26 246 0.82 1.135662602 0.16 0.466666667 0.68 30 7 2 41 2R:14215184-14215267 8 37 649 FBgn0033912 13740.81 3287.363333 4993.36 0.002692709 0.011255221 0.00740984 1 1 1 0.25 dme-miR-2b-2-5p 6mer2-7 TGAAGA 2R 14229591 14229596 + 2R_14229591_14229596_+ 0.999511963 0.675255422 0.837383692 0.229284041 CG8468 FBtr0087533|FBtr0087534|FBtr0087532 14229566|14229566|14229566 14230620|14230620|14230620 2R + 14229537 14229613 stop_codon CG8468 FlyBase G15802.1 CGAGAAGCTAACACCCCTGCCGGCGGCCTAAGGAGCTGCTTGGATCGGAGCGAATGAAGACATGCCAGACAGCCTGA 21 14229591 0.80576175 8 19 40 0.904761905 1.278753601 0.333333333 0 0 21 2 0 19 2R:14229537-14229613 6 CG8468 FBtr0087532|FBtr0087533|FBtr0087534 14229566|14229566|14229566 14230620|14230620|14230620 TGAAGA 6mer2-7 dme-miR-2b-2-5p 2R + 14229536 14229609 stop_codon CG8468 FlyBase G11989.1 ACGAGAAGCTAACACCCCTGCCGGCGGCCTAAGGAGCTGCTTGGATCGGAGCGAATGAAGACATGCCAGACAGC 16 14229591 0.991188258 6 15 31 0.956521739 1.342422681 0.47826087 0.375 0.565217391 16 1 0 22 2R:14229536-14229609 6 12 650 FBgn0033913 3375.036667 105.6 161.63 0.003555517 0.113636364 0.074243643 0 0 0 0.25 dme-miR-184-5p 7mer-A1 GATAAGA 2R 14229765 14229771 + 2R_14229765_14229771_+ 0.7797027 0.77856083 0.779131765 0.000807445 CG8468 FBtr0087533|FBtr0087534|FBtr0087532 14229566|14229566|14229566 14230620|14230620|14230620 2R + 14229632 14229825 3'utr CG8468 FlyBase G15803.1 AGCCACAACTATCTTCGATAGCACCTTTCGGTATTGGCAACATTAATTGACAATCACTCATCCTGTCGAAGGAACTCCCGATTTCGGAGGGAAGCGAGTGCGAAAGCGTGTTCCGAGTACTTAATACAATTAAGATAAGACTAATCGTAATGTTGTGCCTTCAGCGATATCGAGTGCCTACCACACACACCCCT 75 14229756 0.974011666 26 69 438 0.892857143 1.875061263 0.273809524 0.106666667 0.202380952 75 9 0 75 2R:14229632-14229825 7 CG8468 FBtr0087532|FBtr0087533|FBtr0087534 14229566|14229566|14229566 14230620|14230620|14230620 GATAAGA 7mer-A1 dme-miR-184-5p 2R + 14229724 14229822 3'utr CG8468 FlyBase G11990.2 AGCGAGTGCGAAAGCGTGTTCCGAGTACTTAATACAATTAAGATAAGACTAATCGTAATGTTGTGCCTTCAGCGATATCGAGTGCCTACCACACACACC 36 14229756 0.954831493 14 33 219 0.918367347 1.653212514 0.102040816 0.305555556 0.489795918 36 4 0 45 2R:14229724-14229822 7 17 651 FBgn0033913 3375.036667 105.6 161.63 0.005036982 0.160984848 0.105178494 9 9 9 0.25 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 2R 14230734 14230739 - 2R_14230734_14230739_- 0.915196199 0.975659915 0.945428057 0.042754292 Opa1 FBtr0339761|FBtr0339761 14230609|14230609 14232701|14232701 2R - 14230621 14230760 3'utr Opa1 FlyBase G23211.1 AAGACACAACACCCGAGGCGTTACTTATTTAACTTGATAGTTTAAGACCACATTTGAAATGTTTGTTCATAGTCACGCTTGAGCCCCTTAGTTAAGCATACTTTGTGCTCCGAAAGTAATAAACAAATAGATCGTTAGTT 52 14230732 0.985720637 20 48 393 0.93442623 1.45484486 0.229508197 0.134615385 0.262295082 52 3 1 57 2R:14230621-14230760 6 Opa1 FBtr0339759|FBtr0339759|FBtr0087574|FBtr0087574|FBtr0339760|FBtr0339760|FBtr0339761|FBtr0339761|FBtr0087573|FBtr0087573 14230609|14230609|14230609|14230609|14230609|14230609|14230609|14230609|14230609|14230609 14230773|14230773|14230773|14230773|14230773|14230773|14232701|14232701|14230773|14230773 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 2R - 14230712 14230759 3'utr Opa1 FlyBase G17597.2 AGACACAACACCCGAGGCGTTACTTATTTAACTTGATAGTTTAAGACC 12 14230740 0.980322849 4 11 64 1 1.278753601 0.263157895 0.5 0.684210526 12 0 0 19 2R:14230712-14230759 6 17.5 652 FBgn0261276 1194.833333 44.64 68.46666667 0.014646394 0.39202509 0.255598832 -7 1 -3 0.25 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 2R 14231557 14231564 - 2R_14231557_14231564_- 0.566092735 0.468938819 0.517515777 0.068698182 Opa1 FBtr0339761 14230609 14232701 2R - 14231544 14231586 5'utr Opa1 FlyBase G23215.1 TGCGACGAATTACCCACTGGCAGTACCTGACGCAGGATCAGCA 15 14231569 0.826937721 6 15 57 1 1.204119983 0.4375 0.066666667 0.125 15 0 0 16 2R:14231544-14231586 8 Opa1 FBtr0339761 14230609 14232701 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2R - 14231536 14231585 5'utr Opa1 FlyBase G17600.1 GCGACGAATTACCCACTGGCAGTACCTGACGCAGGATCAGCAGAAGAGGC 17 14231569 0.935518732 5 16 64 0.954545455 1.322219295 0.227272727 0.235294118 0.409090909 17 1 0 21 2R:14231536-14231585 8 16 653 FBgn0261276 1194.833333 44.64 68.46666667 0.013390989 0.358422939 0.23369036 5 5 5 0.25 dme-miR-965-3p 8mer-A1 TACGCTTA 2R 14235883 14235890 - 2R_14235883_14235890_- 0.519701981 0.542964924 0.531333453 0.016449354 CG8485 FBtr0087572|FBtr0087571|FBtr0087569 14235785|14235785|14235785 14236079|14236079|14236079 2R - 14235861 14235935 3'utr CG8485 FlyBase G23226.1 ATTTAAATTTAGTGGTAGCGTAATTGTTTTGTCTGTCGTCGTCATTACGCTTAAATTATTCTAAATATATTAATT 127 14235891 0.837384015 5 123 1266 0.979166667 1.672097858 0.138888889 0.134920635 0.243055556 126 1 2 141 2R:14235861-14235935 8 CG8485 FBtr0087569|FBtr0087572|FBtr0087571 14235785|14235785|14235785 14236079|14236079|14236079 TACGCTTA 8mer-A1 dme-miR-965-3p 2R - 14235866 14235913 3'utr CG8485 FlyBase G17610.1 ATTGTTTTGTCTGTCGTCGTCATTACGCTTAAATTATTCTAAATATAT 59 14235891 0.81672171 5 57 565 0.969387755 1.375663614 0.142857143 0.338983051 0.602040816 59 0 3 95 2R:14235866-14235913 8 90.5 654 FBgn0033915 1584.563333 63.64333333 98.23 0.057113527 1.421987116 0.921307136 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 14261079 14261085 + 2R_14261079_14261085_+ 0.797383551 0.552421064 0.674902307 0.173214645 beta4GalNAcTA FBtr0087539|FBtr0087539|FBtr0087539 14260628|14260628|14260628 14261150|14261150|14261150 2R + 14261033 14261088 3'utr beta4GalNAcTA FlyBase G15837.1 AGAAAGCTACACCTATTCCTACAAGGTGAAATGTAGATATTACTTTTGTGATATGC 5 14261077 0.987426376 5 5 43 1 0.903089987 0 0.4 0.625 5 0 0 8 2R:14261033-14261088 7 beta4GalNAcTA FBtr0087539|FBtr0087539|FBtr0087539 14260628|14260628|14260628 14261150|14261150|14261150 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 14261033 14261088 3'utr beta4GalNAcTA FlyBase G12023.1 AGAAAGCTACACCTATTCCTACAAGGTGAAATGTAGATATTACTTTTGTGATATGC 7 14261072 0.985747236 5 6 47 0.875 0.84509804 0 0.142857143 0.25 7 1 0 7 2R:14261033-14261088 7 2.5 655 FBgn0027538 201 13.15333333 20.18 0.012437811 0.19006589 0.123885035 2 7 4.5 0.25 dme-miR-14-3p 8mer-A1 AAGACTGA 2R 14357959 14357966 - 2R_14357959_14357966_- 0.643538856 0.64356268 0.643550768 1.68E-05 Arc1 FBtr0087560 14357925 14359435 2R - 14357950 14358001 3'utr Arc1 FlyBase G23277.1 CGTGGAACTGCTAAAAATATAAAACTGTAAAACTAAAGACTGAAACTAGAAA 252 14357968 0.765409429 9 222 851 0.886363636 1.290034611 0.090909091 0.174603175 0.324675325 252 22 13 273 2R:14357950-14358001 8 Arc1 FBtr0087560 14357925 14359435 AAGACTGA 8mer-A1 dme-miR-14-3p 2R - 14357950 14358031 3'utr Arc1 FlyBase G17650.1 TGGGGGCCTATGGAAGACCACAAGTGGTTGCGTGGAACTGCTAAAAATATAAAACTGTAAAACTAAAGACTGAAACTAGAAA 228 14357968 0.742143498 13 192 822 0.852090032 1.043034632 0.118971061 0.285087719 0.475884244 228 23 23 265 2R:14357950-14358031 8 219 656 FBgn0033926 17202.14 891.9533333 1379.15 0.012730974 0.24552854 0.15879346 2 2 2 0.25 dme-miR-2a-2-5p 7mer-m1 GATGAGG 2R 14511347 14511353 + 2R_14511347_14511353_+ 0.762768995 0.740726359 0.751747677 0.015586472 Asx FBtr0332930 14510482 14512493 2R + 14511312 14511391 3'utr Asx FlyBase G15903.1 CGGTGCGGCCAAGCTGTGTGTCGCCTGTGTGATTAGATGAGGTGGATAACGTTTTGTAGTTACTTAGAGACCCGTACTTT 16 14511345 0.982184086 8 16 120 1 1.278753601 0.578947368 0.1875 0.315789474 16 0 0 19 2R:14511312-14511391 7 Asx FBtr0332930 14510482 14512493 GATGAGG 7mer-m1 dme-miR-2a-2-5p 2R + 14511322 14511396 3'utr Asx FlyBase G12078.1 AAGCTGTGTGTCGCCTGTGTGATTAGATGAGGTGGATAACGTTTTGTAGTTACTTAGAGACCCGTACTTTTAGTC 18 14511345 0.984486375 7 17 132 0.965517241 1.447158031 0.275862069 0.388888889 0.620689655 18 1 0 28 2R:14511322-14511396 7 12.5 657 FBgn0261823 1306.773333 24.71666667 37.93 0.009565546 0.505731625 0.329554442 2 2 2 0.25 dme-miR-14-3p 6mer3-8 AAGACT 2R 14512142 14512147 + 2R_14512142_14512147_+ 0.990728843 0.997784789 0.994256816 0.004989345 Asx FBtr0087493|FBtr0332929|FBtr0332930 14511350|14511350|14510482 14512493|14512493|14512493 2R + 14512109 14512188 3'utr Asx FlyBase G15910.1 CTTTAAGTTTAGTATTATCCACCCAAACGATCTAAGACTCTTCATGCCCACATTTCTTTAGCATGTAGCGTATAAACGTA 29 14512149 0.751203212 9 27 182 0.970588235 1.51851394 0 0.172413793 0.294117647 29 1 0 33 2R:14512109-14512188 6 Asx FBtr0332929|FBtr0332930|FBtr0087493 14511350|14510482|14511350 14512493|14512493|14512493 AAGACT 6mer3-8 dme-miR-14-3p 2R + 14512109 14512180 3'utr Asx FlyBase G12083.1 CTTTAAGTTTAGTATTATCCACCCAAACGATCTAAGACTCTTCATGCCCACATTTCTTTAGCATGTAGCGTA 9 14512141 0.972481451 5 8 58 0.933333333 1.146128036 0.2 0.444444444 0.666666667 9 1 0 14 2R:14512109-14512180 6 13.5 658 FBgn0261823 1306.773333 24.71666667 37.93 0.010330789 0.546190155 0.355918798 -7 1 -3 0.25 dme-miR-190-5p 6mer3-8 ACATAT 2R 14584274 14584279 + 2R_14584274_14584279_+ 0.937931142 0.940928607 0.939429875 0.002119553 ttv FBtr0087495|FBtr0333165|FBtr0333164 14584225|14584225|14584225 14585321|14585321|14587917 2R + 14584247 14584282 3'utr ttv FlyBase G15921.1 TAGCTACAAGCGTTAATAGTACTGAATACATATACA 12 14584263 0.679981291 6 10 69 0.857142857 1.079181246 0 0.166666667 0.285714286 12 2 0 12 2R:14584247-14584282 6 ttv FBtr0333164|FBtr0087495|FBtr0333165 14584225|14584225|14584225 14587917|14585321|14585321 ACATAT 6mer3-8 dme-miR-190-5p 2R + 14584247 14584283 3'utr ttv FlyBase G12092.1 TAGCTACAAGCGTTAATAGTACTGAATACATATACAC 9 14584265 0.948368118 4 8 58 0.933333333 1.146128036 0 0.555555556 0.733333333 9 1 0 14 2R:14584247-14584283 6 9.5 659 FBgn0265974 763.1366667 22.67 34.72 0.012448622 0.419056021 0.273617512 11 9 10 0.25 dme-miR-13b-2-5p 8mer-m1 TTTGACGC 2R 14584400 14584407 + 2R_14584400_14584407_+ 0.618174311 0.618174411 0.618174361 7.07E-08 ttv FBtr0087495|FBtr0333165|FBtr0333164 14584225|14584225|14584225 14585321|14585321|14587917 2R + 14584378 14584427 3'utr ttv FlyBase G15922.1 ATGTTTAGATGAAATGCTGTTTTTTGACGCTGGCCAAGCGATGCAAGAAC 12 14584401 0.727431545 6 11 89 0.933333333 1.146128036 0.4 0.166666667 0.333333333 12 1 0 14 2R:14584378-14584427 8 ttv FBtr0333164|FBtr0087495|FBtr0333165 14584225|14584225|14584225 14587917|14585321|14585321 TTTGACGC 8mer-m1 dme-miR-13b-2-5p 2R + 14584380 14584431 3'utr ttv FlyBase G12093.1 GTTTAGATGAAATGCTGTTTTTTGACGCTGGCCAAGCGATGCAAGAACTATG 12 14584392 0.974310119 6 12 89 1 1.255272505 0.611111111 0.25 0.5 12 0 0 18 2R:14584380-14584431 8 11.5 660 FBgn0265974 763.1366667 22.67 34.72 0.015069385 0.507278341 0.331221198 -1 8 3.5 0.25 dme-miR-980-3p 7mer-A1 GCAGCTA 2R 14760435 14760441 - 2R_14760435_14760441_- 0.821390217 0.82105953 0.821224874 0.00023384 Spred FBtr0329880 14759644 14761759 2R - 14760416 14760470 3'utr Spred FlyBase G23385.1 GTTTTCAAAAAGTCAACAAACTCATATATGCAGCTATATATATATATAAAAATAA 62 14760443 0.846923084 4 58 513 0.943661972 1.826074803 0.028169014 0.080645161 0.197183099 62 4 0 67 2R:14760416-14760470 7 Spred FBtr0329880 14759644 14761759 GCAGCTA 7mer-A1 dme-miR-980-3p 2R - 14760415 14760464 3'utr Spred FlyBase G17721.1 AAAAAGTCAACAAACTCATATATGCAGCTATATATATATATAAAAATAAT 31 14760443 0.827300942 3 30 258 0.954545455 1.62324929 0 0.322580645 0.522727273 31 2 0 42 2R:14760415-14760464 7 46.5 661 FBgn0020767 764.69 30.76 47.25 0.060808955 1.511703511 0.984126984 2 2 2 0.25 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2R 14760846 14760852 - 2R_14760846_14760852_- 0.674795891 0.652361691 0.663578791 0.015863375 Spred FBtr0329880|FBtr0329880 14759644|14759644 14761759|14761759 2R - 14760833 14760872 3'utr Spred FlyBase G23386.1 TCGCTATGCTCGGCAATTGTTACTTAAATGTGCTTTAGTT 16 14760856 0.84422447 2 15 144 0.941176471 1.204119983 0.352941176 0.0625 0.117647059 16 1 0 16 2R:14760833-14760872 7 Spred FBtr0329880|FBtr0329880 14759644|14759644 14761759|14761759 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2R - 14760810 14760867 3'utr Spred FlyBase G17722.1 ATGCTCGGCAATTGTTACTTAAATGTGCTTTAGTTCAGAACTATGTACCCATTCGGTT 10 14760856 0.990263264 3 9 87 0.916666667 1.041392685 0.416666667 0.2 0.333333333 10 1 0 11 2R:14760810-14760867 7 12 662 FBgn0020767 764.69 30.76 47.25 0.015692634 0.390117035 0.253968254 4 4 4 0.25 dme-miR-980-5p 6mer2-7 AAAAAC 2R 14761334 14761339 - 2R_14761334_14761339_- 0.96194846 0.879412806 0.920680633 0.058361553 Spred FBtr0329880|FBtr0087468|FBtr0329879 14759644|14761154|14761154 14761759|14762038|14762038 2R - 14761320 14761356 3'utr Spred FlyBase G23388.1 CTTAATTATAGTTTTGTAAAAACGGGCTATTTGTTTT 5 14761343 0.96429907 3 5 47 1 0.84509804 0.428571429 0.2 0.428571429 5 0 0 7 2R:14761320-14761356 6 Spred FBtr0329879|FBtr0087468|FBtr0329880 14761154|14761154|14759644 14762038|14762038|14761759 AAAAAC 6mer2-7 dme-miR-980-5p 2R - 14761324 14761348 3'utr Spred FlyBase G17724.1 TAGTTTTGTAAAAACGGGCTATTTG 6 14761343 0.550193491 4 6 43 1 1 0.1 0.5 0.7 6 0 0 10 2R:14761324-14761348 6 5 663 FBgn0020767 764.69 30.76 47.25 0.006538597 0.162548765 0.105820106 4 4 4 0.25 dme-miR-932-5p 6mer2-7 GAATTG 2R 14761449 14761454 - 2R_14761449_14761454_- 0.80308569 0.919917654 0.861501672 0.082612699 Spred FBtr0329880|FBtr0087468|FBtr0329879 14759644|14761154|14761154 14761759|14762038|14762038 2R - 14761436 14761516 3'utr Spred FlyBase G23389.1 AAATCAGTTTGCCAAAATGGGTCTGGGGTTCGATTTTAGTATCATTTCGGTATACTCCATTTGAATTGCCATAATTAATTG 12 14761448 0.934017643 9 11 114 0.916666667 1.041392685 0.166666667 0 0 12 1 0 11 2R:14761436-14761516 6 Spred FBtr0329879|FBtr0087468|FBtr0329880 14761154|14761154|14759644 14762038|14762038|14761759 GAATTG 6mer2-7 dme-miR-932-5p 2R - 14761421 14761473 3'utr Spred FlyBase G17725.1 ATTTCGGTATACTCCATTTGAATTGCCATAATTAATTGTATATACAAAAGAGC 5 14761456 0.980386288 4 5 38 1 0.84509804 0.142857143 0.4 0.571428571 5 0 0 7 2R:14761421-14761473 6 4.5 664 FBgn0020767 764.69 30.76 47.25 0.005884738 0.146293888 0.095238095 -6 2 -2 0.25 dme-miR-2535b-3p 6mer3-8 CCGTGA 2R 14846178 14846183 - 2R_14846178_14846183_- 0.965468415 0.992446324 0.978957369 0.019076256 CG10209 FBtr0329883|FBtr0087462 14846062|14846062 14846330|14846417 2R - 14846151 14846200 3'utr CG10209 FlyBase G23400.1 TTTGTAGTAAGTGGATGCCGTGATCCTCATGTAAATGTTCCCGTGGCAAT 26 14846180 0.809774592 4 26 159 1 1.447158031 0.25 0.038461538 0.107142857 26 0 0 28 2R:14846151-14846200 6 CG10209 FBtr0087462|FBtr0329883 14846062|14846062 14846417|14846330 CCGTGA 6mer3-8 dme-miR-2535b-3p 2R - 14846103 14846200 3'utr CG10209 FlyBase G17730.1 TTTGTAGTAAGTGGATGCCGTGATCCTCATGTAAATGTTCCCGTGGCAATAACAGCGTAGCTCAACTGTGACTCAAGTTCTCAATAGATCGCGACGCA 26 14846181 0.980763921 7 24 166 0.953488372 1.612783857 0.162790698 0.538461538 0.720930233 26 2 0 41 2R:14846103-14846200 6 20.5 665 FBgn0033971 206.33 12.39 18.95 0.099355402 1.654560129 1.081794195 -3 -2 -2.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2R 14857343 14857350 + 2R_14857343_14857350_+ 0.629955256 0.629282799 0.629619028 0.000475529 HPS1 FBtr0087449 14857301 14857502 2R + 14857330 14857369 3'utr HPS1 FlyBase G15977.1 TTATAACATGATTTCTAGTCAATTTTCGAGACTCCTAGGC 66 14857342 0.719346163 5 64 592 0.988095238 1.919078092 0 0.196969697 0.369047619 66 1 0 83 2R:14857330-14857369 8 HPS1 FBtr0087449 14857301 14857502 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R + 14857330 14857372 3'utr HPS1 FlyBase G12133.1 TTATAACATGATTTCTAGTCAATTTTCGAGACTCCTAGGCGAG 50 14857342 0.73809567 6 48 461 0.985915493 1.84509804 0.056338028 0.32 0.521126761 50 1 0 70 2R:14857330-14857372 8 57 666 FBgn0033973 78.66666667 4.6 7.043333333 0.724576271 12.39130435 8.09275911 1 1 1 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2R 14866690 14866695 - 2R_14866690_14866695_- 0.949886274 0.562737213 0.756311743 0.273755754 Inr-a FBtr0301513 14866611 14867304 2R - 14866674 14866718 3'utr Inr-a FlyBase G23448.1 GATTTAACTGTGAAGTATTTTTTGTACCTTAAACTTCCTATTGAT 7 14866698 0.792076767 5 7 80 1 0.903089987 0.5 0.142857143 0.25 7 0 0 8 2R:14866674-14866718 6 Inr-a FBtr0301513 14866611 14867304 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2R - 14866684 14866773 3'utr Inr-a FlyBase G17765.1 ATGTCAAAACAATAAGTACAACTAAATTGAAAGCGAACCAAAAATAAACCAAAATGATTTAACTGTGAAGTATTTTTTGTACCTTAAACT 15 14866697 0.999905681 8 14 109 1 1.361727836 0.260869565 0.4 0.608695652 15 0 0 23 2R:14866684-14866773 6 8 667 FBgn0264962 1522.043333 60.58 92.41666667 0.005256092 0.132056784 0.086564472 3 2 2.5 0.25 dme-miR-184-5p 7mer-m8 TGATAAG 2R 14867260 14867266 - 2R_14867260_14867266_- 0.241436332 0.262457775 0.251947053 0.014864445 Inr-a FBtr0301513 14866611 14867304 2R - 14867175 14867375 stop_codon Inr-a FlyBase G23450.1 TCAACCAGAATGGCGGCACTCGATGGCTTAGGTTGGTGGAAGGGCGGGTTATTGGGACCGTATGTGGTTGACAAGTGGAAATCTTCTGCTCAACTCTAACCGAAGTCTGTGATAAGTACAATTGTGATACCAAAGTGGCGTTCCCAACAATGGAATGTGTTAAACTATAGATTTTGCTTGAATTCTGATAAATATCATATT 139 14867270 0.979531721 25 131 906 0.955307263 1.630936119 0.094972067 0.223021583 0.396648045 139 5 3 171 2R:14867175-14867375 7 Inr-a FBtr0301513 14866611 14867304 TGATAAG 7mer-m8 dme-miR-184-5p 2R - 14867196 14867324 stop_codon Inr-a FlyBase G17767.1 TTGGGACCGTATGTGGTTGACAAGTGGAAATCTTCTGCTCAACTCTAACCGAAGTCTGTGATAAGTACAATTGTGATACCAAAGTGGCGTTCCCAACAATGGAATGTGTTAAACTATAGATTTTGCTTG 110 14867270 0.85805092 18 98 710 0.887573964 1.477121255 0.147928994 0.409090909 0.615384615 110 15 4 150 2R:14867196-14867324 7 86 668 FBgn0264962 1522.043333 60.58 92.41666667 0.05650299 1.419610432 0.930568079 4 4 4 0.25 dme-miR-1007-3p 6mer3-8 TGAGCT 2R 14901679 14901684 - 2R_14901679_14901684_- 0.720998625 0.929736737 0.825367681 0.147600126 CG10249 FBtr0303758|FBtr0112929|FBtr0087429|FBtr0303757|FBtr0332856|FBtr0087430|FBtr0301334|FBtr0303756|FBtr0087431 14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473 14901972|14901972|14901972|14901972|14901972|14901972|14902362|14901972|14901972 2R - 14901652 14901731 3'utr CG10249 FlyBase G23465.1 TGAGACACATCGATCAACTAATGCAATTAAGTACTACTGCACAGGCCTGAGCTACCGATCTTAAAGTAGCCGACAAACCA 32 14901694 0.952747833 9 29 153 0.918918919 1.230448921 0.135135135 0.15625 0.27027027 32 2 1 34 2R:14901652-14901731 6 CG10249 FBtr0303757|FBtr0087429|FBtr0112929|FBtr0303758|FBtr0087431|FBtr0303756|FBtr0087430|FBtr0301334|FBtr0332856 14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473 14901972|14901972|14901972|14901972|14901972|14901972|14901972|14902362|14901972 TGAGCT 6mer3-8 dme-miR-1007-3p 2R - 14901658 14901749 3'utr CG10249 FlyBase G17780.1 AACTCTGTGTAATCATTCTGAGACACATCGATCAACTAATGCAATTAAGTACTACTGCACAGGCCTGAGCTACCGATCTTAAAGTAGCCGAC 22 14901680 0.935827302 11 18 99 0.9375 1.176091259 0.1875 0.363636364 0.5625 22 1 1 30 2R:14901658-14901749 6 10.5 669 FBgn0027596 1054.266667 34.76666667 52.75333333 0.00995953 0.302013423 0.199039555 10 -4 3 0.25 dme-miR-92b-3p 7mer-m1 TGCAATT 2R 14901704 14901710 - 2R_14901704_14901710_- 0.407429907 0.616742197 0.512086052 0.148006147 CG10249 FBtr0303758|FBtr0112929|FBtr0087429|FBtr0303757|FBtr0332856|FBtr0087430|FBtr0301334|FBtr0303756|FBtr0087431 14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473 14901972|14901972|14901972|14901972|14901972|14901972|14902362|14901972|14901972 2R - 14901652 14901731 3'utr CG10249 FlyBase G23465.1 TGAGACACATCGATCAACTAATGCAATTAAGTACTACTGCACAGGCCTGAGCTACCGATCTTAAAGTAGCCGACAAACCA 32 14901694 0.952747833 9 29 153 0.918918919 1.230448921 0.135135135 0.15625 0.27027027 32 2 1 34 2R:14901652-14901731 7 CG10249 FBtr0303757|FBtr0087429|FBtr0112929|FBtr0303758|FBtr0087431|FBtr0303756|FBtr0087430|FBtr0301334|FBtr0332856 14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473|14901473 14901972|14901972|14901972|14901972|14901972|14901972|14901972|14902362|14901972 TGCAATT 7mer-m1 dme-miR-92b-3p 2R - 14901658 14901749 3'utr CG10249 FlyBase G17780.1 AACTCTGTGTAATCATTCTGAGACACATCGATCAACTAATGCAATTAAGTACTACTGCACAGGCCTGAGCTACCGATCTTAAAGTAGCCGAC 22 14901681 0.935827302 11 18 99 0.9375 1.176091259 0.1875 0.363636364 0.5625 22 1 1 30 2R:14901658-14901749 7 9 670 FBgn0027596 1054.266667 34.76666667 52.75333333 0.00853674 0.258868648 0.170605333 -16 -29 -22.5 0.25 dme-miR-277-3p 7mer-m8 TGCATTT 2R 14939139 14939145 + 2R_14939139_14939145_+ 0.499345916 0.557073245 0.52820958 0.040819365 Lap1 FBtr0087407|FBtr0303759 14939080|14939080 14940722|14939959 2R + 14939055 14939147 stop_codon Lap1 FlyBase G16002.1 ATGAACATAATGTTGTCGAGAAAATGATGGACCATCTATTTACCGACCTAAGCCGATTCCCATCCCGAGACCGAAGACTTTTTGTGCATTTTT 91 14939135 0.968072193 13 89 470 0.990909091 2.037426498 0.472727273 0.175824176 0.318181818 91 1 0 109 2R:14939055-14939147 7 Lap1 FBtr0087407|FBtr0303759 14939080|14939080 14940722|14939959 TGCATTT 7mer-m8 dme-miR-277-3p 2R + 14939095 14939152 3'utr Lap1 FlyBase G12147.1 TACCGACCTAAGCCGATTCCCATCCCGAGACCGAAGACTTTTTGTGCATTTTTCTAAC 66 14939135 0.701910176 8 59 330 0.914893617 1.457377197 0.478723404 0.318181818 0.521276596 66 6 2 86 2R:14939095-14939152 7 38.5 671 FBgn0033984 772.6433333 22.73333333 35.04666667 0.049828942 1.693548387 1.098535286 4 4 4 0.25 dme-miR-8-3p 8mer-A1 CAGTATTA 2R 14940040 14940047 + 2R_14940040_14940047_+ 0.591369261 0.635911168 0.613640215 0.03149588 Lap1 FBtr0087407 14939080 14940722 2R + 14939983 14940059 3'utr Lap1 FlyBase G16005.1 ATTTTCAATGGTGAACTGTTAGCACAAACTGAATTCTCACGCTATTGGCATTGTGATCAGTATTATTATTTATCTGG 65 14940038 0.861331328 14 63 673 0.974025974 1.875061263 0.12987013 0.184615385 0.311688312 65 2 0 75 2R:14939983-14940059 8 Lap1 FBtr0087407 14939080 14940722 CAGTATTA 8mer-A1 dme-miR-8-3p 2R + 14939952 14940061 3'utr Lap1 FlyBase G12152.1 TATTGTCCAATCGATCGAAGTGTCAAACATTATTTTCAATGGTGAACTGTTAGCACAAACTGAATTCTCACGCTATTGGCATTGTGATCAGTATTATTATTTATCTGGTT 41 14940038 0.990487838 13 39 405 0.951612903 1.293730757 0.161290323 0.414634146 0.612903226 41 1 2 59 2R:14939952-14940061 8 43 672 FBgn0033984 772.6433333 22.73333333 35.04666667 0.055653104 1.891495601 1.226935515 2 2 2 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 2R 14945465 14945470 - 2R_14945465_14945470_- 0.978765107 0.900130747 0.939447927 0.055602917 aPKC FBtr0329887|FBtr0329890|FBtr0303431|FBtr0329888|FBtr0303433|FBtr0329889 14945112|14945112|14945112|14945112|14945112|14945112 14946515|14946046|14946515|14946515|14946515|14946063 2R - 14945431 14945490 3'utr aPKC FlyBase G23483.1 ACTCTAATGTAAAATGTGTGTGTGTTAGTATTAGAGAGCAGAGCATGGTTTTTAAAGGCG 10 14945476 0.960664226 5 8 79 0.916666667 1.041392685 0.5 0.1 0.25 10 1 0 11 2R:14945431-14945490 6 aPKC FBtr0329890|FBtr0303431|FBtr0303433|FBtr0329888|FBtr0329889|FBtr0329887 14945112|14945112|14945112|14945112|14945112|14945112 14946046|14946515|14946515|14946515|14946063|14946515 TGTGTT 6mer3-8 dme-miR-317-3p 2R - 14945444 14945485 3'utr aPKC FlyBase G17795.1 AATGTAAAATGTGTGTGTGTTAGTATTAGAGAGCAGAGCATG 5 14945475 0.989935165 4 4 40 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 2R:14945444-14945485 6 5.5 673 FBgn0261854 1305.743333 49.00666667 75.25333333 0.00421216 0.112229629 0.073086464 6 5 5.5 0.25 dme-miR-33-5p 8mer-A1 CAATGCAA 2R 14945723 14945730 - 2R_14945723_14945730_- 0.567456994 0.532717396 0.550087195 0.024564607 aPKC FBtr0329887|FBtr0329890|FBtr0303431|FBtr0329888|FBtr0303433|FBtr0329889 14945112|14945112|14945112|14945112|14945112|14945112 14946515|14946046|14946515|14946515|14946515|14946063 2R - 14945681 14945745 3'utr aPKC FlyBase G23485.1 AACCATTTCAAAACTCAATGCAAGACTTTTCACCAAGAAACTTAGGGGTTTGACGATCCCGCGAG 42 14945717 0.97226582 5 39 232 0.941176471 1.681241237 0.019607843 0.119047619 0.274509804 42 3 0 48 2R:14945681-14945745 8 aPKC FBtr0329890|FBtr0303431|FBtr0303433|FBtr0329888|FBtr0329889|FBtr0329887 14945112|14945112|14945112|14945112|14945112|14945112 14946046|14946515|14946515|14946515|14946063|14946515 CAATGCAA 8mer-A1 dme-miR-33-5p 2R - 14945703 14945772 3'utr aPKC FlyBase G17796.1 AGGCGAACTTTATGCAAGCAAAAGATAAACCATTTCAAAACTCAATGCAAGACTTTTCACCAAGAAACTT 35 14945717 0.885558642 6 34 172 0.979591837 1.681241237 0.040816327 0.285714286 0.489795918 35 1 0 48 2R:14945703-14945772 8 35 674 FBgn0261854 1305.743333 49.00666667 75.25333333 0.026804655 0.714188546 0.465095677 -13 -13 -13 0.25 dme-bantam-3p 7mer-A1 GATCTCA 2R 15142987 15142993 + 2R_15142987_15142993_+ 0.740825481 0.816927947 0.778876714 0.053812523 chn FBtr0305217 15140383 15143633 2R + 15142975 15143012 3'utr chn FlyBase G16024.1 AAACGGCAGTTGGATCTCAGCACACCTCGTCGGAGTCC 11 15142984 0.827527859 2 10 43 0.928571429 1.113943352 0 0.272727273 0.428571429 11 1 0 13 2R:15142975-15143012 7 chn FBtr0305217 15140383 15143633 GATCTCA 7mer-A1 dme-bantam-3p 2R + 15142975 15143012 3'utr chn FlyBase G12169.1 AAACGGCAGTTGGATCTCAGCACACCTCGTCGGAGTCC 9 15142985 0.850944964 3 8 38 0.9375 1.176091259 0 0.555555556 0.75 9 1 0 15 2R:15142975-15143012 7 10 675 FBgn0015371 413.87 9.896666667 15.28666667 0.024162177 1.010441226 0.65416485 3 2 2.5 0.25 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 2R 15143592 15143599 + 2R_15143592_15143599_+ 0.34822856 0.345588669 0.346908614 0.001866691 chn FBtr0305217|FBtr0305214|FBtr0111006|FBtr0305213|FBtr0087415|FBtr0305215|FBtr0087416|FBtr0305216 15140383|15143450|15143450|15143450|15143450|15143450|15143450|15143450 15143633|15144783|15143633|15144783|15144783|15144783|15143633|15144783 2R + 15143549 15143617 3'utr chn FlyBase G16025.1 ATTTAAAAAATTGCATTTAATTTTTTAAATTTTAAGTTGTGATGTACCTGAAATATGATTTCTCTTAAA 365 15143591 0.848455508 6 359 2596 0.987288136 2.668385917 0.006355932 0.235616438 0.408898305 365 6 0 466 2R:15143549-15143617 8 chn FBtr0087416|FBtr0305216|FBtr0087415|FBtr0305215|FBtr0111006|FBtr0305213|FBtr0305217|FBtr0305214 15143450|15143450|15143450|15143450|15143450|15143450|15140383|15143450 15143633|15144783|15144783|15144783|15143633|15144783|15143633|15144783 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2R + 15143549 15143619 3'utr chn FlyBase G12170.1 ATTTAAAAAATTGCATTTAATTTTTTAAATTTTAAGTTGTGATGTACCTGAAATATGATTTCTCTTAAACA 276 15143591 0.957782997 6 275 1914 0.997487437 2.598790507 0.005025126 0.358695652 0.555276382 276 1 0 397 2R:15143549-15143619 8 316 676 FBgn0015371 413.87 9.896666667 15.28666667 0.763524778 31.92994274 20.67160925 1 1 1 0.25 dme-miR-283-5p 8mer-m1 TGATATTT 2R 15204187 15204194 + 2R_15204187_15204194_+ 0.489378729 0.416396677 0.452887703 0.051606067 CG11807 FBtr0087363|FBtr0310139 15204105|15204105 15204466|15204466 2R + 15204172 15204212 3'utr CG11807 FlyBase G16044.1 ATAAGTATTGCCTATTGATATTTCTTGCAACTAAACCCTAT 15 15204186 0.754482161 4 13 155 0.882352941 1.176091259 0.117647059 0.133333333 0.235294118 15 2 0 15 2R:15204172-15204212 8 CG11807 FBtr0310139|FBtr0087363 15204105|15204105 15204466|15204466 TGATATTT 8mer-m1 dme-miR-283-5p 2R + 15204170 15204200 3'utr CG11807 FlyBase G12180.1 TTATAAGTATTGCCTATTGATATTTCTTGCA 7 15204186 0.772898109 2 7 82 1 0.954242509 0.333333333 0.285714286 0.444444444 7 0 0 9 2R:15204170-15204200 8 11 677 FBgn0033996 352.6333333 22.09 33.89 0.031193875 0.497962879 0.324579522 1 1 1 0.25 dme-bantam-3p 6mer2-7 GATCTC 2R 15222769 15222774 + 2R_15222769_15222774_+ 0.959283577 0.844158165 0.901720871 0.081405951 CG8079 FBtr0339995|FBtr0339994 15222101|15222101 15223671|15223671 2R + 15222738 15222779 3'utr CG8079 FlyBase G16051.1 CAATGGATCCCCAATGTCCAGCGACGCCATGGATCTCGTTCA 7 15222767 0.963412443 3 7 35 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 2R:15222738-15222779 6 CG8079 FBtr0339995|FBtr0339994 15222101|15222101 15223671|15223671 GATCTC 6mer2-7 dme-bantam-3p 2R + 15222751 15222786 3'utr CG8079 FlyBase G12187.1 ATGTCCAGCGACGCCATGGATCTCGTTCACGGCAGT 12 15222767 0.959183692 2 11 56 0.947368421 1.255272505 0.210526316 0.5 0.684210526 12 1 0 18 2R:15222751-15222786 6 9 678 FBgn0034002 425.32 23.75 36.47 0.021160538 0.378947368 0.246778174 2 2 2 0.25 dme-miR-252-5p 7mer-m8 GTACTTA 2R 15262867 15262873 - 2R_15262867_15262873_- 0.578267115 0.588111119 0.583189117 0.006960759 Trpm FBtr0339080|FBtr0339082|FBtr0339077|FBtr0339079|FBtr0339074|FBtr0339081|FBtr0339078|FBtr0339076 15262806|15262806|15262806|15262806|15262806|15262806|15262806|15262806 15263722|15263722|15263722|15263722|15263722|15263722|15263722|15263722 2R - 15262850 15262977 3'utr Trpm FlyBase G23564.1 AAATTGTTCATGTTTGGCCAATGTGTGCTAGTAACTTAAATTAGATTTTTAAATATTTTCAAGGATTAAGAATAACAATGCATTTTAATAAAATATTTATGATTGTACTTATTTATGTTAAGAATTGT 61 15262874 0.89564363 13 58 592 0.945205479 1.537819095 0.068493151 0.180327869 0.315068493 61 3 1 69 2R:15262850-15262977 7 Trpm FBtr0339074|FBtr0339081|FBtr0339078|FBtr0339076|FBtr0339080|FBtr0339077|FBtr0339082|FBtr0339079 15262806|15262806|15262806|15262806|15262806|15262806|15262806|15262806 15263722|15263722|15263722|15263722|15263722|15263722|15263722|15263722 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 15262852 15262915 3'utr Trpm FlyBase G17844.1 GGATTAAGAATAACAATGCATTTTAATAAAATATTTATGATTGTACTTATTTATGTTAAGAATT 26 15262874 0.798963332 8 26 242 1 1.591064607 0.128205128 0.461538462 0.641025641 26 0 0 39 2R:15262852-15262915 7 17 679 FBgn0265194 654.6833333 11.36 17.34333333 0.025966752 1.496478873 0.980203729 1 1 1 0.25 dme-miR-980-3p 6mer2-7 GCAGCT 2R 15263210 15263215 - 2R_15263210_15263215_- 0.902830015 0.852128963 0.877479489 0.035851021 Trpm FBtr0339080|FBtr0339082|FBtr0339077|FBtr0339079|FBtr0339074|FBtr0339081|FBtr0339078|FBtr0339076 15262806|15262806|15262806|15262806|15262806|15262806|15262806|15262806 15263722|15263722|15263722|15263722|15263722|15263722|15263722|15263722 2R - 15263185 15263242 3'utr Trpm FlyBase G23566.1 TTACCTCAGCTCAATTAGAAACCTATCGCAGCTCAATGTACTTTATGCCTGTCCCTGT 59 15263217 0.833470585 8 55 324 0.935897436 1.386201605 0.064102564 0.305084746 0.474358974 59 3 2 73 2R:15263185-15263242 6 Trpm FBtr0339074|FBtr0339081|FBtr0339078|FBtr0339076|FBtr0339080|FBtr0339077|FBtr0339082|FBtr0339079 15262806|15262806|15262806|15262806|15262806|15262806|15262806|15262806 15263722|15263722|15263722|15263722|15263722|15263722|15263722|15263722 GCAGCT 6mer2-7 dme-miR-980-3p 2R - 15263177 15263228 3'utr Trpm FlyBase G17846.1 TTAGAAACCTATCGCAGCTCAATGTACTTTATGCCTGTCCCTGTCGGAGTTC 31 15263206 0.718915996 5 30 165 0.976190476 1.612783857 0.119047619 0.322580645 0.5 31 1 0 41 2R:15263177-15263228 6 37.5 680 FBgn0265194 654.6833333 11.36 17.34333333 0.057279601 3.301056338 2.162214107 2 -9 -3.5 0.25 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2R 15266558 15266563 - 2R_15266558_15266563_- 0.895567041 0.757458282 0.826512661 0.097657598 Trpm FBtr0339075 15266379 15267776 2R - 15266540 15266582 3'utr Trpm FlyBase G23572.1 TGCTTTAGCTTCTAGGCTCTTTGACATCAGTAATATTATATAT 17 15266562 0.720090845 5 16 151 1 1.255272505 0.111111111 0.058823529 0.111111111 17 0 0 18 2R:15266540-15266582 6 Trpm FBtr0339075 15266379 15267776 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2R - 15266508 15266585 3'utr Trpm FlyBase G17849.1 ACATGCTTTAGCTTCTAGGCTCTTTGACATCAGTAATATTATATATTTTGCAGACTCTCTTTTAATTATTTTTAAACC 8 15266562 0.984523894 4 8 73 1 1.079181246 0.25 0.375 0.583333333 8 0 0 12 2R:15266508-15266585 6 9.5 681 FBgn0265194 654.6833333 11.36 17.34333333 0.014510832 0.836267606 0.547760907 -1 -1 -1 0.25 dme-miR-307a-3p 7mer-m8 GGTTGTG 2R 15312904 15312910 + 2R_15312904_15312910_+ 0.697769303 0.672833362 0.685301333 0.017632344 mus210 FBtr0308700 15312836 15312964 2R + 15312843 15312937 3'utr mus210 FlyBase G16063.1 CAGCCAGGCTCCCGGAAGAGTTGGCGTTGGCAGAAGGCAGTCGAGCATGCTTATCCAAGTTGGTTGTGGCGCTGGCATTTCTGGTATCTGATGAA 13 15312903 0.980783063 8 13 89 1 1.113943352 0.153846154 0 0 13 0 0 13 2R:15312843-15312937 7 mus210 FBtr0308700 15312836 15312964 GGTTGTG 7mer-m8 dme-miR-307a-3p 2R + 15312891 15312937 3'utr mus210 FlyBase G12192.1 GCTTATCCAAGTTGGTTGTGGCGCTGGCATTTCTGGTATCTGATGAA 6 15312903 0.983056415 4 6 48 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 2R:15312891-15312937 7 7 682 FBgn0004698 1924.22 65.94333333 101.31 0.003637838 0.106151746 0.069094857 1 1 1 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 15318102 15318108 - 2R_15318102_15318108_- 0.553605252 0.596875774 0.575240513 0.030596864 CG8155 FBtr0087391 15317815 15318579 2R - 15318058 15318170 3'utr CG8155 FlyBase G23588.1 TTTATCTGCACCTTTGCCAAACGATCAAATGCGAGCTGTTTGGCTGGAAATTGCTTTATTTCTCTAGTCTGCTAATGCATTCCATGCTGTTGTAAAAACTATATTTTAGATTT 100 15318101 0.797159459 17 92 965 0.911290323 2.053078443 0.274193548 0.19 0.346774194 100 11 0 113 2R:15318058-15318170 7 CG8155 FBtr0087391 15317815 15318579 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R - 15318042 15318167 3'utr CG8155 FlyBase G17862.1 ATCTGCACCTTTGCCAAACGATCAAATGCGAGCTGTTTGGCTGGAAATTGCTTTATTTCTCTAGTCTGCTAATGCATTCCATGCTGTTGTAAAAACTATATTTTAGATTTAAAATCGCGCCTAAAT 64 15318101 0.989255874 17 62 594 0.978723404 1.963787827 0.308510638 0.359375 0.563829787 64 2 0 92 2R:15318042-15318167 7 49.5 683 FBgn0034009 669.7533333 19.16666667 29.26666667 0.073907807 2.582608696 1.691343964 -7 -7 -7 0.25 dme-miR-304-5p 7mer-A1 GAGATTA 2R 15324693 15324699 + 2R_15324693_15324699_+ 0.820945563 0.735413062 0.778179312 0.060480611 Arf51F FBtr0087379|FBtr0087376|FBtr0087375|FBtr0087377|FBtr0087378 15324343|15324343|15324343|15324343|15324343 15324892|15324892|15325490|15324892|15324892 2R + 15324624 15324718 3'utr Arf51F FlyBase G16089.1 AAGCAGCCGGTAAATATCCGTAAAGTAAATTATGCGTGAAGCACAGAGACATAAAGCAAAACATCAACGGAGATTAGCCTTAAGTAAGTTTTTCT 21 15324698 0.958424837 9 20 97 0.966666667 1.161368002 0.066666667 0.285714286 0.5 21 0 1 29 2R:15324624-15324718 7 Arf51F FBtr0087378|FBtr0087375|FBtr0087377|FBtr0087379|FBtr0087376 15324343|15324343|15324343|15324343|15324343 15324892|15325490|15324892|15324892|15324892 GAGATTA 7mer-A1 dme-miR-304-5p 2R + 15324630 15324712 3'utr Arf51F FlyBase G12211.1 CCGGTAAATATCCGTAAAGTAAATTATGCGTGAAGCACAGAGACATAAAGCAAAACATCAACGGAGATTAGCCTTAAGTAAGT 12 15324697 0.951630036 6 11 46 0.956521739 1.041392685 0.173913043 0.583333333 0.782608696 12 0 1 22 2R:15324630-15324712 7 11.5 684 FBgn0013750 5123.97 471.35 724.4566667 0.002244353 0.024398006 0.015873965 -5 -4 -4.5 0.25 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2R 15324786 15324791 + 2R_15324786_15324791_+ 0.888893445 0.77978021 0.834336827 0.077154684 Arf51F FBtr0087379|FBtr0087376|FBtr0087375|FBtr0087377|FBtr0087378 15324343|15324343|15324343|15324343|15324343 15324892|15324892|15325490|15324892|15324892 2R + 15324758 15324806 3'utr Arf51F FlyBase G16090.1 AAGCTTGTTTATTGCAACTGTTACTATATTTGACTTGAGCAAGGGTGTA 6 15324787 0.994060431 4 4 45 0.555555556 0.698970004 0.333333333 0.5 0.666666667 6 4 0 5 2R:15324758-15324806 6 Arf51F FBtr0087378|FBtr0087375|FBtr0087377|FBtr0087379|FBtr0087376 15324343|15324343|15324343|15324343|15324343 15324892|15325490|15324892|15324892|15324892 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2R + 15324738 15324804 3'utr Arf51F FlyBase G12212.1 ACACGTAAGCAATAAGTTGAAAGCTTGTTTATTGCAACTGTTACTATATTTGACTTGAGCAAGGGTG 10 15324769 0.986719804 7 9 81 0.916666667 1.041392685 0.25 0.2 0.333333333 10 1 0 11 2R:15324738-15324804 6 5 685 FBgn0013750 5123.97 471.35 724.4566667 0.000975806 0.010607829 0.006901724 -1 17 8 0.25 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 15367647 15367653 + 2R_15367647_15367653_+ 0.459446055 0.486458729 0.472952392 0.019100793 unc-5 FBtr0087382|FBtr0339998 15367154|15367154 15368300|15368300 2R + 15367607 15367706 3'utr unc-5 FlyBase G16103.1 AAGTGTAGCTGTAGTCATAGTCACTAAGTTACTGTAGTGTTGTGTTCTAAGGTAACTTGCTCAACGAACTTTGTTCCCTATGGGTGCCATGCATTTTATA 26 15367646 0.735667145 14 24 230 0.9375 1.477121255 0.1875 0.153846154 0.3125 26 2 0 30 2R:15367607-15367706 7 unc-5 FBtr0339998|FBtr0087382 15367154|15367154 15368300|15368300 TGTGTTC 7mer-m8 dme-miR-317-3p 2R + 15367606 15367739 3'utr unc-5 FlyBase G12222.1 AAAGTGTAGCTGTAGTCATAGTCACTAAGTTACTGTAGTGTTGTGTTCTAAGGTAACTTGCTCAACGAACTTTGTTCCCTATGGGTGCCATGCATTTTATACACTAAACAGGAAGAATGTAGCGTTTAATTATA 27 15367646 0.771039974 15 24 231 0.95 1.579783597 0.15 0.481481481 0.65 27 2 0 38 2R:15367606-15367739 7 10.5 686 FBgn0034013 1156.016667 26.96666667 41.28333333 0.009082914 0.389369592 0.254339927 1 1 1 0.25 dme-miR-8-3p 6mer3-8 CAGTAT 2R 15387745 15387750 + 2R_15387745_15387750_+ 0.992463618 0.979993812 0.986228715 0.00881748 SRPK FBtr0087385|FBtr0087384 15385390|15385390 15387851|15387851 2R + 15387718 15387774 3'utr SRPK FlyBase G16131.1 AGGAACCCAGCTGCCGAATTGCAATTCCAGTATGTTCTCACGCTTTCAAAGAGTATA 12 15387750 0.987288356 8 11 94 0.923076923 0.77815125 0.153846154 0.083333333 0.153846154 12 0 1 12 2R:15387718-15387774 6 SRPK FBtr0087385|FBtr0087384 15385390|15385390 15387851|15387851 CAGTAT 6mer3-8 dme-miR-8-3p 2R + 15387726 15387775 3'utr SRPK FlyBase G12237.1 AGCTGCCGAATTGCAATTCCAGTATGTTCTCACGCTTTCAAAGAGTATAA 7 15387743 0.977105951 6 7 61 1 1.041392685 0.181818182 0.428571429 0.636363636 7 0 0 11 2R:15387726-15387775 6 9 687 FBgn0026370 1940.296667 50.52 77.84666667 0.004638466 0.178147268 0.115611887 -5 2 -1.5 0.25 dme-miR-1012-3p 7mer-A1 TGACTAA 2R 15515073 15515079 + 2R_15515073_15515079_+ 0.774881468 0.822947312 0.79891439 0.033987653 GalNAc-T1 FBtr0340001|FBtr0087332|FBtr0087331 15515017|15515017|15515017 15515597|15515597|15515597 2R + 15515013 15515099 stop_codon GalNAc-T1 FlyBase G16135.1 CACTGAGGAGATAGGGTGTAGCGGGGGAATGGGATGGGGACCAAAGCAACTGAGAGATACTGACTAACGCCGACTGAACGGAACTCG 77 15515070 0.936978837 8 67 256 0.894117647 1.579783597 0.305882353 0.077922078 0.164705882 77 8 1 76 2R:15515013-15515099 7 GalNAc-T1 FBtr0087331|FBtr0087332|FBtr0340001 15515017|15515017|15515017 15515597|15515597|15515597 TGACTAA 7mer-A1 dme-miR-1012-3p 2R + 15515055 15515105 3'utr GalNAc-T1 FlyBase G12239.1 AAAGCAACTGAGAGATACTGACTAACGCCGACTGAACGGAACTCGAATTCA 51 15515070 0.738278793 6 47 157 0.931034483 1.431363764 0.252873563 0.509803922 0.712643678 51 4 2 81 2R:15515055-15515105 7 60.5 688 FBgn0034025 414.2533333 21.30666667 32.93666667 0.146045898 2.839486859 1.836858618 3 3 3 0.25 dme-miR-11-3p 7mer-m1 TGTGATG 2R 15517768 15517774 - 2R_15517768_15517774_- 0.535569666 0.535591873 0.535580769 1.57E-05 Khc-73 FBtr0329957|FBtr0087357|FBtr0329956|FBtr0329955|FBtr0346265 15517705|15517705|15515776|15517705|15517705 15518577|15518751|15518751|15518751|15518751 2R - 15517747 15517797 3'utr Khc-73 FlyBase G23622.1 ATGTGTAAATTGTATTATTTTGATGTGATGTATTTATAATTTCCCTTTATA 55 15517779 0.662314028 12 50 715 0.904761905 1.755874856 0.222222222 0.145454545 0.253968254 55 6 0 57 2R:15517747-15517797 7 Khc-73 FBtr0329955|FBtr0346265|FBtr0087357|FBtr0329956|FBtr0329957 15517705|15517705|15517705|15515776|15517705 15518751|15518751|15518751|15518751|15518577 TGTGATG 7mer-m1 dme-miR-11-3p 2R - 15517754 15517813 3'utr Khc-73 FlyBase G17883.1 CGCACCGTCGCAGTTAATGTGTAAATTGTATTATTTTGATGTGATGTATTTATAATTTCC 46 15517778 0.619482257 9 42 572 0.920634921 1.286306739 0.174603175 0.282608696 0.476190476 46 3 2 58 2R:15517754-15517813 7 46.5 689 FBgn0019968 1323.716667 22.35333333 34.32 0.035128363 2.080226663 1.354895105 5 4 4.5 0.25 dme-miR-1007-3p 6mer3-8 TGAGCT 2R 15517964 15517969 - 2R_15517964_15517969_- 0.979252854 0.984224096 0.981738475 0.003515169 Khc-73 FBtr0329957|FBtr0087357|FBtr0329956|FBtr0329955|FBtr0346265 15517705|15517705|15515776|15517705|15517705 15518577|15518751|15518751|15518751|15518751 2R - 15517937 15517994 3'utr Khc-73 FlyBase G23623.1 AATTTCGTCTCCATATGACCTTTCCTGAGCTCATTTTCTTTTTAGCGCATTTATATAC 25 15517979 0.990037848 8 24 237 0.96969697 1.505149978 0.03030303 0.24 0.424242424 25 1 0 32 2R:15517937-15517994 6 Khc-73 FBtr0329955|FBtr0346265|FBtr0087357|FBtr0329956|FBtr0329957 15517705|15517705|15517705|15515776|15517705 15518751|15518751|15518751|15518751|15518577 TGAGCT 6mer3-8 dme-miR-1007-3p 2R - 15517946 15518008 3'utr Khc-73 FlyBase G17884.1 TAAGATCTTGCAATAATTTCGTCTCCATATGACCTTTCCTGAGCTCATTTTCTTTTTAGCGCA 12 15517960 0.989103882 8 11 108 1 1.342422681 0.045454545 0.583333333 0.772727273 12 0 0 22 2R:15517946-15518008 6 14 690 FBgn0019968 1323.716667 22.35333333 34.32 0.010576281 0.626304802 0.407925408 10 -9 0.5 0.25 dme-miR-1007-3p 8mer-A1 TGAGCTTA 2R 15518060 15518067 - 2R_15518060_15518067_- 0.584487979 0.551340676 0.567914327 0.023438681 Khc-73 FBtr0329957|FBtr0087357|FBtr0329956|FBtr0329955|FBtr0346265 15517705|15517705|15515776|15517705|15517705 15518577|15518751|15518751|15518751|15518751 2R - 15518019 15518168 3'utr Khc-73 FlyBase G23624.1 TTCGATTTTGGAATGAAGCGTTTTACTGATATATTTTCTAATGGTTCTTTGCCTTTAGTTTAGTTAAATTGTTTTTGATATCAATGTGACTTGTTTAACGATGAGCTTATATTTTTACTTGTTATTGACTATATTCAATATATTTGTATA 70 15518067 0.993028279 21 65 770 0.93902439 1.886490725 0.243902439 0.1 0.231707317 70 5 0 77 2R:15518019-15518168 8 Khc-73 FBtr0329955|FBtr0346265|FBtr0087357|FBtr0329956|FBtr0329957 15517705|15517705|15517705|15515776|15517705 15518751|15518751|15518751|15518751|15518577 TGAGCTTA 8mer-A1 dme-miR-1007-3p 2R - 15518047 15518098 3'utr Khc-73 FlyBase G17885.1 GTTTTTGATATCAATGTGACTTGTTTAACGATGAGCTTATATTTTTACTTGT 32 15518067 0.888361174 8 31 332 0.977272727 1.633468456 0.5 0.34375 0.522727273 32 1 0 43 2R:15518047-15518098 8 20.5 691 FBgn0019968 1323.716667 22.35333333 34.32 0.015486698 0.917089174 0.597319347 0 0 0 0.25 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 15518195 15518201 - 2R_15518195_15518201_- 0.642183408 0.413498152 0.52784078 0.161704856 Khc-73 FBtr0329957|FBtr0087357|FBtr0329956|FBtr0329955|FBtr0346265 15517705|15517705|15515776|15517705|15517705 15518577|15518751|15518751|15518751|15518751 2R - 15518179 15518219 3'utr Khc-73 FlyBase G23625.1 CTTTTGATTCCATTGTTTTGTGTTCGTGTAGTTAATTGTCG 15 15518202 0.755233482 4 15 228 1 1.230448921 0.176470588 0.133333333 0.235294118 15 0 0 17 2R:15518179-15518219 7 Khc-73 FBtr0329955|FBtr0346265|FBtr0087357|FBtr0329956|FBtr0329957 15517705|15517705|15517705|15515776|15517705 15518751|15518751|15518751|15518751|15518577 TGTGTTC 7mer-m8 dme-miR-317-3p 2R - 15518102 15518215 3'utr Khc-73 FlyBase G17886.1 TGATTCCATTGTTTTGTGTTCGTGTAGTTAATTGTCGTTTTTTGCTTTTCGATTTTGGAATGAAGCGTTTTACTGATATATTTTCTAATGGTTCTTTGCCTTTAGTTTAGTTAA 21 15518202 0.984626508 10 20 248 0.961538462 1.397940009 0.115384615 0.238095238 0.384615385 21 1 0 25 2R:15518102-15518215 7 11 692 FBgn0019968 1323.716667 22.35333333 34.32 0.008309935 0.49209663 0.320512821 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 15562855 15562861 - 2R_15562855_15562861_- 0.730659337 0.696234427 0.713446882 0.02434208 CG8195 FBtr0087353|FBtr0087353|FBtr0087353 15562695|15562695|15562695 15563163|15563163|15563163 2R - 15562828 15562887 3'utr CG8195 FlyBase G23655.2 TAGATCCCACGAATACCGTTTATCTATGTGATAGTCTACAACGTTTTGCTGAACTCCACC 22 15562865 0.989705506 6 18 194 0.888888889 1.380211242 0.481481481 0.227272727 0.37037037 22 3 0 24 2R:15562828-15562887 7 CG8195 FBtr0087353|FBtr0087353|FBtr0087353 15562695|15562695|15562695 15563163|15563163|15563163 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 15562848 15562890 3'utr CG8195 FlyBase G17905.1 CTTTAGATCCCACGAATACCGTTTATCTATGTGATAGTCTACA 17 15562864 0.992582069 3 13 153 0.8 1 0.44 0.411764706 0.6 17 4 1 20 2R:15562848-15562890 7 17 693 FBgn0034032 150.0733333 7.953333333 12.14666667 0.113277953 2.137468567 1.399560922 4 3 3.5 0.25 dme-miR-1007-3p 6mer3-8 TGAGCT 2R 15569895 15569900 - 2R_15569895_15569900_- 0.956057489 0.606821886 0.781439687 0.246946861 Cdk5 FBtr0087350 15569526 15570131 2R - 15569873 15569934 3'utr Cdk5 FlyBase G23670.1 AATCCCTACCAATGTGACACTTAATATAGCCATTTGAGCTGCCAAATTAACATTTATCGATA 30 15569901 0.964499519 7 29 199 0.947368421 1.556302501 0.026315789 0.266666667 0.421052632 30 2 0 36 2R:15569873-15569934 6 Cdk5 FBtr0087350 15569526 15570131 TGAGCT 6mer3-8 dme-miR-1007-3p 2R - 15569884 15569935 3'utr Cdk5 FlyBase G17916.1 CAATCCCTACCAATGTGACACTTAATATAGCCATTTGAGCTGCCAAATTAAC 17 15569901 0.968412684 4 16 94 1 1.414973348 0.038461538 0.5 0.692307692 16 0 0 26 2R:15569884-15569935 6 20 694 FBgn0013762 182.3333333 13.78 20.92333333 0.109689214 1.45137881 0.955870639 1 1 1 0.25 dme-miR-14-3p 7mer-A1 AGACTGA 2R 15572953 15572959 + 2R_15572953_15572959_+ 0.806160088 0.77461342 0.790386754 0.022306885 CG30466 FBtr0340004|FBtr0087339 15572925|15572925 15573170|15573170 2R + 15572941 15572964 3'utr CG30466 FlyBase G16152.1 GAACGAAGCTGTAGACTGATGACT 23 15572960 0.649982143 3 22 73 0.970588235 1.217483944 0.029411765 0.347826087 0.558823529 23 0 1 33 2R:15572941-15572964 7 CG30466 FBtr0087339|FBtr0340004 15572925|15572925 15573170|15573170 AGACTGA 7mer-A1 dme-miR-14-3p 2R + 15572941 15572965 3'utr CG30466 FlyBase G12258.1 GAACGAAGCTGTAGACTGATGACTA 18 15572960 0.660615026 3 17 64 0.928571429 0.937852093 0 0.5 0.678571429 18 0 2 26 2R:15572941-15572965 7 20 695 FBgn0050466 280.3266667 17.32333333 26.4 0.071345335 1.154512219 0.757575758 -7 -7 -7 0.25 dme-miR-317-3p 8mer-A1 TGTGTTCA 2R 15869650 15869657 - 2R_15869650_15869657_- 0.440956436 0.440888354 0.440922395 4.81E-05 sli FBtr0330732 15869493 15873378 2R - 15869633 15869703 3'utr sli FlyBase G23755.1 TTAACCTTTTTCCGGCGAAGCTTTCGACGGTTCACAGCCGCAAAATTGTGTTCAGCTAATTAATTAGGAAG 74 15869658 0.907520099 4 67 494 0.892857143 1.397940009 0.083333333 0.121621622 0.226190476 74 7 2 75 2R:15869633-15869703 8 sli FBtr0330732 15869493 15873378 TGTGTTCA 8mer-A1 dme-miR-317-3p 2R - 15869632 15869699 3'utr sli FlyBase G17980.1 CCTTTTTCCGGCGAAGCTTTCGACGGTTCACAGCCGCAAAATTGTGTTCAGCTAATTAATTAGGAAGA 38 15869658 0.979534386 4 36 242 0.967741935 1.477121255 0.14516129 0.394736842 0.629032258 38 1 1 60 2R:15869632-15869699 8 53.5 696 FBgn0264089 1642.536667 21.12333333 32.62 0.032571571 2.532744201 1.640098099 1 1 1 0.25 dme-bantam-3p 6mer2-7 GATCTC 2R 15873130 15873135 - 2R_15873130_15873135_- 0.999998615 0.918290751 0.959144683 0.057776139 sli FBtr0330730|FBtr0330729|FBtr0330733|FBtr0330732|FBtr0330731 15870052|15870052|15870052|15869493|15870052 15873378|15873378|15873378|15873378|15873378 2R - 15873057 15873284 3'utr sli FlyBase G23772.1 ATAGTAACGATAGTCTTAGCCATAGCACTAGGGATAGCACGGATGTTAGGGGGACGAAGGATGAAGCGGAGGAGAGTGCTGACGCGGGGGAGACAACGGAGGAGGTGAGGGACGAGAGTGATGATTACCCCACGGACGGCATGCAGTCCGATCTCTACGACGACACCATCGATGACGACGATGACGATGGTCTCGATGATGATTATGCAGACGAGGAGGATGGGGAGG 92 15873129 0.999981595 19 79 374 0.866071429 1.032529225 0.160714286 0.173913043 0.321428571 92 7 8 97 2R:15873057-15873284 6 sli FBtr0330731|FBtr0330733|FBtr0330732|FBtr0330730|FBtr0330729 15870052|15870052|15869493|15870052|15870052 15873378|15873378|15873378|15873378|15873378 GATCTC 6mer2-7 dme-bantam-3p 2R - 15873120 15873159 3'utr sli FlyBase G17993.1 TACCCCACGGACGGCATGCAGTCCGATCTCTACGACGACA 20 15873129 0.855016061 4 16 80 0.838709677 1.414973348 0.032258065 0.3 0.548387097 20 5 0 26 2R:15873120-15873159 6 33 697 FBgn0264089 1642.536667 21.12333333 32.62 0.020090876 1.562253432 1.011649295 -6 -6 -6 0.25 dme-miR-1012-3p 6mer2-7 TGACTA 2R 15936199 15936204 - 2R_15936199_15936204_- 0.552160732 0.70282826 0.627494496 0.106538082 Mlf FBtr0087292|FBtr0306650|FBtr0302149|FBtr0087294|FBtr0087295|FBtr0087293|FBtr0306649 15935891|15935891|15935891|15935891|15935891|15935891|15936089 15936459|15936459|15937286|15936459|15936459|15938254|15936459 2R - 15936183 15936256 3'utr Mlf FlyBase G23841.1 GATGTGCACGCAGGATACAGAACAACTTGCTTAAATTTACTTAAAACAAATGTGACTATTCAACGCCGAAATCA 26 15936199 0.675114678 9 23 128 0.931034483 1.431363764 0.275862069 0.076923077 0.172413793 26 2 0 27 2R:15936183-15936256 6 Mlf FBtr0087293|FBtr0306649|FBtr0087294|FBtr0087295|FBtr0306650|FBtr0302149|FBtr0087292 15935891|15936089|15935891|15935891|15935891|15935891|15935891 15938254|15936459|15936459|15936459|15936459|15937286|15936459 TGACTA 6mer2-7 dme-miR-1012-3p 2R - 15936182 15936256 3'utr Mlf FlyBase G18057.1 GATGTGCACGCAGGATACAGAACAACTTGCTTAAATTTACTTAAAACAAATGTGACTATTCAACGCCGAAATCAT 15 15936200 0.960857502 6 14 75 1 1.431363764 0.222222222 0.666666667 0.814814815 15 0 0 27 2R:15936182-15936256 6 14.5 698 FBgn0034051 2421.99 180.2466667 275.5966667 0.005986812 0.080445316 0.052613118 -5 -4 -4.5 0.25 dme-miR-970-3p 6mer3-8 TCTTAT 2R 15936314 15936319 - 2R_15936314_15936319_- 0.983355786 0.977272514 0.98031415 0.004301543 Mlf FBtr0087292|FBtr0306650|FBtr0302149|FBtr0087294|FBtr0087295|FBtr0087293|FBtr0306649 15935891|15935891|15935891|15935891|15935891|15935891|15936089 15936459|15936459|15937286|15936459|15936459|15938254|15936459 2R - 15936305 15936346 3'utr Mlf FlyBase G23842.1 AACAAACACAATTCTTTACCAGTTCTGTCTTATCCTGCGTGA 14 15936324 0.947104158 5 9 127 0.777777778 0.84509804 0 0.142857143 0.333333333 14 3 1 14 2R:15936305-15936346 6 Mlf FBtr0087293|FBtr0306649|FBtr0087294|FBtr0087295|FBtr0306650|FBtr0302149|FBtr0087292 15935891|15936089|15935891|15935891|15935891|15935891|15935891 15938254|15936459|15936459|15936459|15936459|15937286|15936459 TCTTAT 6mer3-8 dme-miR-970-3p 2R - 15936304 15936337 3'utr Mlf FlyBase G18058.1 AATTCTTTACCAGTTCTGTCTTATCCTGCGTGAG 10 15936317 0.606502231 3 10 91 1 1.146128036 0 0.4 0.571428571 10 0 0 14 2R:15936304-15936337 6 11 699 FBgn0034051 2421.99 180.2466667 275.5966667 0.00454172 0.061027481 0.0399134 5 -2 1.5 0.25 dme-miR-252-5p 7mer-m8 GTACTTA 2R 15989698 15989704 - 2R_15989698_15989704_- 0.395830518 0.444677187 0.420253852 0.034539833 CG8314 FBtr0087268 15989681 15989940 2R - 15989685 15989736 3'utr CG8314 FlyBase G23862.1 AAATATCCATTTCCGTGGCCGGGTGAAGATGTGTACTTACCTGACAGCCCTA 21 15989702 0.973605614 4 20 126 1 1.397940009 0.36 0.19047619 0.32 21 0 0 25 2R:15989685-15989736 7 CG8314 FBtr0087268 15989681 15989940 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 15989683 15989727 3'utr CG8314 FlyBase G18068.1 TTTCCGTGGCCGGGTGAAGATGTGTACTTACCTGACAGCCCTACT 17 15989705 0.706773237 6 16 109 0.896551724 1.414973348 0.344827586 0.529411765 0.724137931 17 3 0 26 2R:15989683-15989727 7 17.5 700 FBgn0034057 362 35.10666667 54.10333333 0.048342541 0.49848082 0.323455117 -2 1 -0.5 0.25 dme-miR-965-3p 8mer-A1 TACGCTTA 2R 15993469 15993476 + 2R_15993469_15993476_+ 0.61599936 0.542259229 0.579129294 0.052142195 CG8320 FBtr0087202 15993411 15993707 2R + 15993435 15993491 3'utr CG8320 FlyBase G16233.1 GGTGGTTAAGGGGTTCCTGGTTTTAATGAGATTCTACGCTTAGTTGTGTGTGCGTTT 18 15993461 0.737970341 8 17 175 0.952380952 1 0.142857143 0.111111111 0.238095238 18 0 1 20 2R:15993435-15993491 8 CG8320 FBtr0087202 15993411 15993707 TACGCTTA 8mer-A1 dme-miR-965-3p 2R + 15993442 15993490 3'utr CG8320 FlyBase G12324.1 AAGGGGTTCCTGGTTTTAATGAGATTCTACGCTTAGTTGTGTGTGCGTT 14 15993461 0.822717235 6 12 145 0.842105263 1.204119983 0.421052632 0.285714286 0.473684211 14 3 0 16 2R:15993442-15993490 8 13 701 FBgn0034059 68.78 8.71 13.22666667 0.189008433 1.492537313 0.982862903 8 8 8 0.25 dme-miR-1012-3p 8mer-A1 TTGACTAA 2R 16006868 16006875 + 2R_16006868_16006875_+ 0.610754878 0.297229584 0.453992231 0.221695866 CG8370 FBtr0087203|FBtr0340015 16006745|16006745 16006901|16006901 2R + 16006823 16006888 3'utr CG8370 FlyBase G16244.2 ACGCGACGATGGAGGAACGCTGAATGATCTTTTCCAATTTGACTTTTGACTAATAAACGCAAAGAT 85 16006847 0.744385576 11 82 600 0.944954128 2.012837225 0.064220183 0.235294118 0.403669725 85 6 0 103 2R:16006823-16006888 8 CG8370 FBtr0087203|FBtr0340015 16006745|16006745 16006901|16006901 TTGACTAA 8mer-A1 dme-miR-1012-3p 2R + 16006824 16006884 3'utr CG8370 FlyBase G12328.1 CGCGACGATGGAGGAACGCTGAATGATCTTTTCCAATTTGACTTTTGACTAATAAACGCAA 55 16006847 0.768294812 11 54 380 0.988372093 1.62838893 0.034883721 0.454545455 0.651162791 55 0 1 85 2R:16006824-16006884 8 17 702 FBgn0034060 699.34 15.97 24.45666667 0.024308634 1.06449593 0.695106992 21 21 21 0.25 dme-miR-307a-3p 7mer-A1 GTTGTGA 2R 16013663 16013669 + 2R_16013663_16013669_+ 0.821951612 0.821617181 0.821784396 0.000236457 CG8389 FBtr0087205|FBtr0087204 16013535|16013535 16013815|16013815 2R + 16013635 16013681 3'utr CG8389 FlyBase G16251.1 TTCCACTCTCGCCGCAGTAGTTATCTGAGTTGTGAGGAAGGACCAGT 10 16013658 0.971705354 6 10 62 1 1.079181246 0.416666667 0.1 0.25 10 0 0 12 2R:16013635-16013681 7 CG8389 FBtr0087205|FBtr0087204 16013535|16013535 16013815|16013815 GTTGTGA 7mer-A1 dme-miR-307a-3p 2R + 16013635 16013687 3'utr CG8389 FlyBase G12335.1 TTCCACTCTCGCCGCAGTAGTTATCTGAGTTGTGAGGAAGGACCAGTGTCAGG 9 16013660 0.96877785 6 9 53 1 1.146128036 0.5 0.444444444 0.642857143 9 0 0 14 2R:16013635-16013687 7 8 703 FBgn0034063 106.9966667 6.81 10.28666667 0.074768684 1.174743025 0.777705768 5 3 4 0.25 dme-miR-34-5p 7mer-A1 ACTGCCA 2R 16013773 16013779 + 2R_16013773_16013779_+ 0.666765077 0.688180849 0.677472963 0.015143187 CG8389 FBtr0087205|FBtr0087204 16013535|16013535 16013815|16013815 2R + 16013750 16013792 3'utr CG8389 FlyBase G16252.1 TAGCCCCTAGACCTAACTTTTGTACTGCCATAAGAGCCAAAAT 20 16013770 0.915043189 7 19 143 0.956521739 1.041392685 0.043478261 0.15 0.260869565 20 0 1 22 2R:16013750-16013792 7 CG8389 FBtr0087205|FBtr0087204 16013535|16013535 16013815|16013815 ACTGCCA 7mer-A1 dme-miR-34-5p 2R + 16013749 16013789 3'utr CG8389 FlyBase G12336.1 TTAGCCCCTAGACCTAACTTTTGTACTGCCATAAGAGCCAA 15 16013770 0.785004705 5 14 109 0.952380952 1.301029996 0.047619048 0.333333333 0.523809524 15 1 0 20 2R:16013749-16013789 7 17 704 FBgn0034063 106.9966667 6.81 10.28666667 0.158883454 2.496328928 1.652624757 3 3 3 0.25 dme-miR-79-3p 8mer-A1 TAGCTTTA 2R 16060133 16060140 + 2R_16060133_16060140_+ 0.62535275 0.625361874 0.625357312 6.43E-06 CG8405 FBtr0340020 16059325 16060835 2R + 16060091 16060163 3'utr CG8405 FlyBase G16263.1 GCCTCCACTGATGCTTCTACTGTTTGCCCAAGCTCTTTGCTTTAGCTTTATGGAATACCATAGGATTGTCAAC 11 16060130 0.991243007 5 9 103 0.9375 1.176091259 0.125 0.272727273 0.5 11 1 0 15 2R:16060091-16060163 8 CG8405 FBtr0340020 16059325 16060835 TAGCTTTA 8mer-A1 dme-miR-79-3p 2R + 16060100 16060174 3'utr CG8405 FlyBase G12340.2 GATGCTTCTACTGTTTGCCCAAGCTCTTTGCTTTAGCTTTATGGAATACCATAGGATTGTCAACTGTAATATATT 11 16060132 0.985149209 7 11 114 1 1.113943352 0.461538462 0.181818182 0.307692308 11 0 0 13 2R:16060100-16060174 8 7 705 FBgn0034071 1286.916667 39.81333333 61.00666667 0.005439358 0.175820496 0.114741558 3 1 2 0.25 dme-miR-184-3p 6mer2-7 CCGTCC 2R 16082067 16082072 - 2R_16082067_16082072_- 0.654640208 0.911441592 0.7830409 0.181586011 Dg FBtr0306238|FBtr0087256|FBtr0087258|FBtr0087257 16081174|16081665|16081665|16081665 16083271|16083271|16083271|16083271 2R - 16081986 16082137 3'utr Dg FlyBase G23940.1 ATGTAGCTGCTAGTTGGGCAGTACTTACTACACTACTACCTACTACTATCTACTACCTAATCCAACCGTCCCTTATCCCTGAATCGAACTAACATGTAGTGAGTAAAGCATTGATTTTATATGAACTTATAGTGGAAGTCCAGAGCCTAAGT 29 16082064 0.983456213 14 25 198 0.848484848 1.146128036 0.060606061 0.137931034 0.242424242 29 4 1 28 2R:16081986-16082137 6 Dg FBtr0087258|FBtr0087257|FBtr0306238|FBtr0087256 16081665|16081665|16081174|16081665 16083271|16083271|16083271|16083271 CCGTCC 6mer2-7 dme-miR-184-3p 2R - 16082015 16082089 3'utr Dg FlyBase G18122.1 TCTACTACCTAATCCAACCGTCCCTTATCCCTGAATCGAACTAACATGTAGTGAGTAAAGCATTGATTTTATATG 12 16082064 0.84238356 7 11 77 1 1.204119983 0.125 0.25 0.4375 12 0 0 16 2R:16082015-16082089 6 12 706 FBgn0034072 2596.65 61.60333333 94.99 0.004621339 0.194794654 0.126329087 -8 -8 -8 0.25 dme-miR-980-3p 8mer-A1 GGCAGCTA 2R 16082658 16082665 - 2R_16082658_16082665_- 0.660304142 0.650896599 0.65560037 0.006652107 Dg FBtr0306238|FBtr0087256|FBtr0087258|FBtr0087257 16081174|16081665|16081665|16081665 16083271|16083271|16083271|16083271 2R - 16082618 16082676 3'utr Dg FlyBase G23943.1 CCACGTCCCTGGGCAGCTATTAGACTTTCAGCTTGATTTGCTCAAGCTGAATTGCTTGC 31 16082657 0.841091109 6 29 179 0.947368421 1.255272505 0.236842105 0.193548387 0.342105263 31 1 1 36 2R:16082618-16082676 8 Dg FBtr0087258|FBtr0087257|FBtr0306238|FBtr0087256 16081665|16081665|16081174|16081665 16083271|16083271|16083271|16083271 GGCAGCTA 8mer-A1 dme-miR-980-3p 2R - 16082619 16082676 3'utr Dg FlyBase G18123.1 CCACGTCCCTGGGCAGCTATTAGACTTTCAGCTTGATTTGCTCAAGCTGAATTGCTTG 28 16082657 0.739482349 6 26 155 0.944444444 1.531478917 0.027777778 0.285714286 0.444444444 28 2 0 34 2R:16082619-16082676 8 25.5 707 FBgn0034072 2596.65 61.60333333 94.99 0.009820345 0.41393864 0.26844931 -8 -8 -8 0.25 dme-miR-999-3p 6mer3-8 AGTTAA 2R 16082709 16082714 - 2R_16082709_16082714_- 0.903781141 0.662173803 0.782977472 0.17084216 Dg FBtr0306238|FBtr0087256|FBtr0087258|FBtr0087257 16081174|16081665|16081665|16081665 16083271|16083271|16083271|16083271 2R - 16082692 16082726 3'utr Dg FlyBase G23944.1 GTACTAAAATTAAGTTAAACGCGAGAAAGAAGGCA 9 16082712 0.931765806 3 7 27 0.888888889 0.903089987 0.111111111 0 0 9 1 0 8 2R:16082692-16082726 6 Dg FBtr0087258|FBtr0087257|FBtr0306238|FBtr0087256 16081665|16081665|16081174|16081665 16083271|16083271|16083271|16083271 AGTTAA 6mer3-8 dme-miR-999-3p 2R - 16082693 16082724 3'utr Dg FlyBase G18124.1 ACTAAAATTAAGTTAAACGCGAGAAAGAAGGC 5 16082711 0.961968141 2 3 14 0.857142857 0.77815125 0.285714286 0.4 0.571428571 5 1 0 6 2R:16082693-16082724 6 6.5 708 FBgn0034072 2596.65 61.60333333 94.99 0.002503225 0.105513771 0.068428256 -2 -3 -2.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2R 16106360 16106365 + 2R_16106360_16106365_+ 0.816999035 0.565267025 0.69113303 0.178001404 Rho1 FBtr0087214|FBtr0087216|FBtr0087211|FBtr0087212|FBtr0087213|FBtr0087217 16106050|16106050|16106050|16106050|16106050|16106050 16106489|16107229|16106489|16107229|16107229|16107229 2R + 16106238 16106377 3'utr Rho1 FlyBase G16277.1 AACAAACATGAGCAGAAAACAGAGAGCTTGAGCTAGAAGATCAGCGGAGGAGGGATGCAGCGAGATATAAGGGAAGGCAGCACCAAGTAGAATGTCAAATGCGGATTTGATTTTATATACAGTCTAGTGTAGTTATAAAC 33 16106343 0.960980034 16 32 156 0.975609756 1.602059991 0.341463415 0.151515152 0.317073171 33 1 0 40 2R:16106238-16106377 6 Rho1 FBtr0087211|FBtr0087212|FBtr0087213|FBtr0087217|FBtr0087214|FBtr0087216 16106050|16106050|16106050|16106050|16106050|16106050 16106489|16107229|16107229|16107229|16106489|16107229 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 16106312 16106380 3'utr Rho1 FlyBase G12354.1 AGGCAGCACCAAGTAGAATGTCAAATGCGGATTTGATTTTATATACAGTCTAGTGTAGTTATAAACCGA 9 16106338 0.979705776 6 9 67 1 1.041392685 0 0.222222222 0.363636364 9 0 0 11 2R:16106312-16106380 6 4.5 709 FBgn0014020 13816.13667 1325.1 2048.813333 0.000325706 0.00339597 0.002196393 17 22 19.5 0.25 dme-miR-980-5p 7mer-m1 AAAAACT 2R 16106418 16106424 + 2R_16106418_16106424_+ 0.765316425 0.753854193 0.759585309 0.008104999 Rho1 FBtr0087214|FBtr0087216|FBtr0087211|FBtr0087212|FBtr0087213|FBtr0087217 16106050|16106050|16106050|16106050|16106050|16106050 16106489|16107229|16106489|16107229|16107229|16107229 2R + 16106385 16106452 3'utr Rho1 FlyBase G16278.1 AACAACAGTAATAACTCTGGCATTATTATTTGTAAAAACTAGGGCAGAGCAGATCAATCAGTCAGCCA 11 16106402 0.979376616 9 11 71 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 2R:16106385-16106452 7 Rho1 FBtr0087211|FBtr0087212|FBtr0087213|FBtr0087217|FBtr0087214|FBtr0087216 16106050|16106050|16106050|16106050|16106050|16106050 16106489|16107229|16107229|16107229|16106489|16107229 AAAAACT 7mer-m1 dme-miR-980-5p 2R + 16106386 16106438 3'utr Rho1 FlyBase G12355.1 ACAACAGTAATAACTCTGGCATTATTATTTGTAAAAACTAGGGCAGAGCAGAT 6 16106403 0.967776752 4 5 32 1 1 0 0.5 0.7 6 0 0 10 2R:16106386-16106438 7 3.5 710 FBgn0014020 13816.13667 1325.1 2048.813333 0.000253327 0.00264131 0.001708306 16 15 15.5 0.25 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 16106575 16106580 + 2R_16106575_16106580_+ 0.774205307 0.977667295 0.875936301 0.14386936 Rho1 FBtr0087216|FBtr0087212|FBtr0087213|FBtr0087217 16106050|16106050|16106050|16106050 16107229|16107229|16107229|16107229 2R + 16106556 16106623 3'utr Rho1 FlyBase G16280.1 GTTGTCAAGTGTAGAGTCGGCTGTGGCTGGACGAGATTGTGTCGTATGCGAGGGTGAGTGAGTCAGGT 12 16106572 0.982148918 6 9 66 0.769230769 0.698970004 0.692307692 0.083333333 0.153846154 12 2 1 10 2R:16106556-16106623 6 Rho1 FBtr0087212|FBtr0087213|FBtr0087217|FBtr0087216 16106050|16106050|16106050|16106050 16107229|16107229|16107229|16107229 GCTGTG 6mer2-7 dme-miR-1008-3p 2R + 16106531 16106592 3'utr Rho1 FlyBase G12357.1 TGTATGTTATTATTTCGTTAACTGTGTTGTCAAGTGTAGAGTCGGCTGTGGCTGGACGAGAT 6 16106565 0.970215811 3 6 46 1 1.113943352 0.615384615 0.5 0.769230769 6 0 0 13 2R:16106531-16106592 6 6.5 711 FBgn0014020 13816.13667 1325.1 2048.813333 0.000470464 0.00490529 0.003172568 3 10 6.5 0.25 dme-miR-2a-2-5p 7mer-A1 GATGAGA 2R 16106703 16106709 + 2R_16106703_16106709_+ 0.782526929 0.782813057 0.782669993 0.000202374 Rho1 FBtr0087216|FBtr0087212|FBtr0087213|FBtr0087217 16106050|16106050|16106050|16106050 16107229|16107229|16107229|16107229 2R + 16106650 16106732 3'utr Rho1 FlyBase G16281.1 GGAAACGGAATCGGATGTTGGATCCCGGGGTCCAAGGAGGTCGTAGGCGTCAAGATGAGAGTTATGTTCCCATTAAATCTATC 12 16106705 0.983969879 8 11 79 0.923076923 0.77815125 0.153846154 0.083333333 0.153846154 12 0 1 12 2R:16106650-16106732 7 Rho1 FBtr0087212|FBtr0087213|FBtr0087217|FBtr0087216 16106050|16106050|16106050|16106050 16107229|16107229|16107229|16107229 GATGAGA 7mer-A1 dme-miR-2a-2-5p 2R + 16106668 16106758 3'utr Rho1 FlyBase G12358.1 TGGATCCCGGGGTCCAAGGAGGTCGTAGGCGTCAAGATGAGAGTTATGTTCCCATTAAATCTATCAAATACAGAGAGACCAGGCCGCCAAT 12 16106714 0.975307998 5 10 72 1 1.255272505 0.111111111 0.416666667 0.611111111 12 0 0 18 2R:16106668-16106758 7 7.5 712 FBgn0014020 13816.13667 1325.1 2048.813333 0.000542844 0.00565995 0.003660656 -2 -11 -6.5 0.25 dme-bantam-3p 6mer3-8 TGATCT 2R 16107213 16107218 + 2R_16107213_16107218_+ 0.984868987 0.999932639 0.992400813 0.010651574 Rho1 FBtr0087216|FBtr0087212|FBtr0087213|FBtr0087217 16106050|16106050|16106050|16106050 16107229|16107229|16107229|16107229 2R + 16107117 16107231 3'utr Rho1 FlyBase G16285.1 ACCGTCAATCGTGTAATTCTCACACAGAAGTTGAAAAACTCGAAGATGCATCAGATACAACCAAACTATATTATACTTATGAATAAACAGTACATTTGATCTACTCTTGGTTTAA 32 16107212 0.984671253 13 31 248 0.975609756 1.602059991 0.219512195 0.28125 0.43902439 32 1 0 40 2R:16107117-16107231 6 Rho1 FBtr0087212|FBtr0087213|FBtr0087217|FBtr0087216 16106050|16106050|16106050|16106050 16107229|16107229|16107229|16107229 TGATCT 6mer3-8 dme-bantam-3p 2R + 16107179 16107225 3'utr Rho1 FlyBase G12360.1 AAACTATATTATACTTATGAATAAACAGTACATTTGATCTACTCTTG 12 16107212 0.98813775 6 10 93 0.8 1.079181246 0.066666667 0.25 0.4 12 3 0 12 2R:16107179-16107225 6 15 713 FBgn0014020 13816.13667 1325.1 2048.813333 0.001085687 0.0113199 0.007321311 1 1 1 0.25 dme-miR-277-3p 7mer-A1 GCATTTA 2R 16141707 16141713 + 2R_16141707_16141713_+ 0.811576118 0.816518247 0.814047183 0.003494592 Got1 FBtr0087231|FBtr0087232 16141592|16141592 16141928|16141928 2R + 16141672 16141794 3'utr Got1 FlyBase G16301.2 ATCCCAAAGCTGGATCACAGATGTCTGCACCATTGGCATTTAAATCAAACCAACAACAATTGCAATTACTAAACGTTTATACGCGGCTTTTAGATGGATATACACATATTATACACCGGAAAC 69 16141705 0.980309831 15 66 466 0.975 1.892094603 0.0875 0.130434783 0.25 69 2 0 78 2R:16141672-16141794 7 Got1 FBtr0087231|FBtr0087232 16141592|16141592 16141928|16141928 GCATTTA 7mer-A1 dme-miR-277-3p 2R + 16141678 16141768 3'utr Got1 FlyBase G12377.1 AAGCTGGATCACAGATGTCTGCACCATTGGCATTTAAATCAAACCAACAACAATTGCAATTACTAAACGTTTATACGCGGCTTTTAGATGG 29 16141705 0.918595857 8 29 185 1 1.672097858 0.063829787 0.413793103 0.638297872 29 0 0 47 2R:16141678-16141768 7 27 714 FBgn0001124 622.6666667 44.53666667 67.53 0.043361884 0.606242048 0.399822301 2 2 2 0.25 dme-miR-980-3p 7mer-m8 GGCAGCT 2R 16145990 16145996 - 2R_16145990_16145996_- 0.658680349 0.65875069 0.658715519 4.98E-05 Ext2 FBtr0100513 16145902 16146381 2R - 16145970 16146010 3'utr Ext2 FlyBase G23963.1 TAGGTCGTAATATTGGCAGCTTTTATCTAGACTTTATTTTG 118 16145997 0.783795038 12 103 1142 0.892307692 1.023065304 0.192307692 0.093220339 0.176923077 118 4 10 116 2R:16145970-16146010 7 Ext2 FBtr0100513 16145902 16146381 GGCAGCT 7mer-m8 dme-miR-980-3p 2R - 16145911 16146010 3'utr Ext2 FlyBase G18137.1 TAGGTCGTAATATTGGCAGCTTTTATCTAGACTTTATTTTGATTTTAAATCAATAATTTAAAAAACTGAAACTGGCCTGTAAATAAGAATTAAAATAATC 112 16145998 0.989554471 18 99 985 0.883040936 1.224734438 0.105263158 0.375 0.590643275 112 12 8 151 2R:16145911-16146010 7 98.5 715 FBgn0029175 123.3333333 5.64 8.726666667 0.798648649 17.46453901 11.28724217 1 2 1.5 0.25 dme-bantam-3p 6mer2-7 GATCTC 2R 16146227 16146232 - 2R_16146227_16146232_- 0.998991945 0.999944445 0.999468195 0.000673519 Ext2 FBtr0100513 16145902 16146381 2R - 16146202 16146247 3'utr Ext2 FlyBase G23966.1 AGGCCAACTTATCTGGATCTCGCTTAGAAAATCAATTTCGTCATTG 22 16146235 0.631600099 8 20 139 0.925925926 0.920818754 0.111111111 0.227272727 0.37037037 22 0 2 25 2R:16146202-16146247 6 Ext2 FBtr0100513 16145902 16146381 GATCTC 6mer2-7 dme-bantam-3p 2R - 16146203 16146290 3'utr Ext2 FlyBase G18139.1 AATGTTCGTTTATATCATAGCAATACCTTCTTAACGGATAAAGAGGCCAACTTATCTGGATCTCGCTTAGAAAATCAATTTCGTCATT 11 16146224 0.987250248 6 10 82 0.95 1.278753601 0.05 0.636363636 0.8 11 1 0 19 2R:16146203-16146290 6 12 716 FBgn0029175 123.3333333 5.64 8.726666667 0.097297297 2.127659574 1.375095493 3 -8 -2.5 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 2R 16146326 16146333 - 2R_16146326_16146333_- 0.600914791 0.561941862 0.581428327 0.027558002 Ext2 FBtr0100513 16145902 16146381 2R - 16146321 16146357 3'utr Ext2 FlyBase G23967.1 TTCCAGAGGAACCTATGCAGATATACCAAAGACTTCT 29 16146334 0.903560685 3 28 134 0.971428571 1.531478917 0.228571429 0.206896552 0.342857143 29 1 0 34 2R:16146321-16146357 8 Ext2 FBtr0100513 16145902 16146381 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 16146321 16146402 stop_codon Ext2 FlyBase G18140.1 AATGATATTGGTAGCTTATAAGGGTCCTTAGCTTTGAGGCCAACATTCCAGAGGAACCTATGCAGATATACCAAAGACTTCT 21 16146334 0.900705693 4 20 109 0.972222222 1.243038049 0.166666667 0.476190476 0.694444444 21 0 1 35 2R:16146321-16146402 8 21.5 717 FBgn0029175 123.3333333 5.64 8.726666667 0.174324324 3.812056738 2.463712758 1 1 1 0.25 dme-miR-988-3p 6mer2-7 CAAGGG 2R 16183693 16183698 + 2R_16183693_16183698_+ 0.990537883 0.990457641 0.990497762 5.68E-05 Lis-1 FBtr0087240|FBtr0087241|FBtr0304747|FBtr0087236 16183675|16183675|16183675|16183675 16185103|16185103|16183991|16185103 2R + 16183680 16183733 3'utr Lis-1 FlyBase G16359.1 AAGGAAGAATCGGCAAGGGTTCTGCTTACTTCTCAATTTAAACATAAATAAAGC 26 16183706 0.627784791 6 24 215 0.970588235 1.51851394 0.029411765 0.269230769 0.441176471 26 1 0 33 2R:16183680-16183733 6 Lis-1 FBtr0087236|FBtr0304747|FBtr0087241|FBtr0087240 16183675|16183675|16183675|16183675 16185103|16183991|16185103|16185103 CAAGGG 6mer2-7 dme-miR-988-3p 2R + 16183668 16183720 stop_codon Lis-1 FlyBase G12426.1 TGTCGTTAAATTAAGGAAGAATCGGCAAGGGTTCTGCTTACTTCTCAATTTAA 22 16183706 0.785535448 8 19 168 0.84 0.84509804 0.12 0.136363636 0.24 22 2 2 21 2R:16183668-16183720 6 20.5 718 FBgn0015754 1628.096667 94.36 143.8866667 0.01259139 0.217253073 0.142473243 -13 -13 -13 0.25 dme-miR-999-3p 6mer3-8 AGTTAA 2R 16183988 16183993 + 2R_16183988_16183993_+ 0.972846678 0.972944987 0.972895832 6.95E-05 Lis-1 FBtr0087240|FBtr0087241|FBtr0087236 16183675|16183675|16183675 16185103|16185103|16185103 2R + 16183975 16184012 3'utr Lis-1 FlyBase G16361.1 GATTATCGTTTAAAGTTAATGCCGCCCTCCTTTATAAA 5 16183993 0.717100882 3 5 43 1 0.903089987 0 0.4 0.625 5 0 0 8 2R:16183975-16184012 6 Lis-1 FBtr0087236|FBtr0087241|FBtr0087240 16183675|16183675|16183675 16185103|16185103|16185103 AGTTAA 6mer3-8 dme-miR-999-3p 2R + 16183975 16184008 3'utr Lis-1 FlyBase G12428.1 GATTATCGTTTAAAGTTAATGCCGCCCTCCTTTA 5 16183993 0.73429486 3 5 34 1 0.954242509 0 0.6 0.777777778 5 0 0 9 2R:16183975-16184008 6 5 719 FBgn0015754 1628.096667 94.36 143.8866667 0.003071071 0.052988554 0.034749571 -5 -5 -5 0.25 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 16184444 16184450 + 2R_16184444_16184450_+ 0.657610402 0.660833727 0.659222064 0.002279217 Lis-1 FBtr0087240|FBtr0087241|FBtr0087236 16183675|16183675|16183675 16185103|16185103|16185103 2R + 16184394 16184476 3'utr Lis-1 FlyBase G16363.1 GATAACAGTTTGCTTCTTTTAACCATATTCACTTTACACAATTCCTGTTTTGTGTTCTTTTTCGCGAAAGGATCTTCAACAAA 47 16184443 0.994858123 9 45 627 0.981818182 1.73239376 0.036363636 0.170212766 0.290909091 47 1 0 54 2R:16184394-16184476 7 Lis-1 FBtr0087236|FBtr0087241|FBtr0087240 16183675|16183675|16183675 16185103|16185103|16185103 TGTGTTC 7mer-m8 dme-miR-317-3p 2R + 16184409 16184460 3'utr Lis-1 FlyBase G12430.1 CTTTTAACCATATTCACTTTACACAATTCCTGTTTTGTGTTCTTTTTCGCGA 27 16184443 0.99430167 6 27 354 1 1.531478917 0.029411765 0.222222222 0.382352941 27 0 0 34 2R:16184409-16184460 7 34.5 720 FBgn0015754 1628.096667 94.36 143.8866667 0.021190388 0.365621026 0.239772043 1 1 1 0.25 dme-miR-33-5p 7mer-m8 CAATGCA 2R 16184972 16184978 + 2R_16184972_16184978_+ 0.667963951 0.609533242 0.638748597 0.041316815 Lis-1 FBtr0087240|FBtr0087241|FBtr0087236 16183675|16183675|16183675 16185103|16185103|16185103 2R + 16184938 16184991 3'utr Lis-1 FlyBase G16366.1 AAAAAACAAAATGCGCACTAAAGCCACGACAACTCAATGCATAATTCGCAAAAC 10 16184971 0.918386417 4 10 33 1 1.041392685 0.272727273 0.1 0.181818182 10 0 0 11 2R:16184938-16184991 7 Lis-1 FBtr0087236|FBtr0087241|FBtr0087240 16183675|16183675|16183675 16185103|16185103|16185103 CAATGCA 7mer-m8 dme-miR-33-5p 2R + 16184956 16184985 3'utr Lis-1 FlyBase G12433.1 TAAAGCCACGACAACTCAATGCATAATTCG 5 16184979 0.944892381 4 4 18 0.857142857 0.77815125 0.428571429 0.4 0.571428571 5 1 0 6 2R:16184956-16184985 7 7 721 FBgn0015754 1628.096667 94.36 143.8866667 0.004299499 0.074183976 0.0486494 1 -7 -3 0.25 dme-miR-980-3p 7mer-m8 GGCAGCT 2R 16194249 16194255 - 2R_16194249_16194255_- 0.654005184 0.653401177 0.653703181 0.000427092 calypso FBtr0087245|FBtr0087246 16194060|16194060 16194434|16194434 2R - 16194231 16194291 3'utr calypso FlyBase G23979.1 ACTCAAATGCGGTTCTTTTAAATACGAAATCAACTTGGCAGCTTCATTTTTATTTGATCGC 175 16194257 0.832030415 6 172 1135 0.985148515 1.696793085 0.475247525 0.131428571 0.247524752 175 0 3 199 2R:16194231-16194291 7 calypso FBtr0087246|FBtr0087245 16194060|16194060 16194434|16194434 GGCAGCT 7mer-m8 dme-miR-980-3p 2R - 16194231 16194268 3'utr calypso FlyBase G18147.1 ACGAAATCAACTTGGCAGCTTCATTTTTATTTGATCGC 147 16194257 0.838331054 4 146 982 0.990990991 2.342422681 0.436936937 0.367346939 0.581081081 147 2 0 220 2R:16194231-16194268 7 159.5 722 FBgn0262166 217.8466667 12.40333333 18.96 0.732166356 12.85944639 8.412447257 2 2 2 0.25 dme-miR-8-3p 7mer-m8 CAGTATT 2R 16194362 16194368 - 2R_16194362_16194368_- 0.652826849 0.633971254 0.643399052 0.013332852 calypso FBtr0087245|FBtr0087246 16194060|16194060 16194434|16194434 2R - 16194315 16194391 3'utr calypso FlyBase G23980.1 TGCATTTTTAAGACCATTCATTCCAGTATTGTTTTTCTACAATTTCCCCACCAAGAAGCACCATTAACCCATAAGAT 28 16194371 0.989152823 6 28 266 1 1.477121255 0.1 0.071428571 0.133333333 28 0 0 30 2R:16194315-16194391 7 calypso FBtr0087246|FBtr0087245 16194060|16194060 16194434|16194434 CAGTATT 7mer-m8 dme-miR-8-3p 2R - 16194335 16194392 3'utr calypso FlyBase G18148.1 TTGCATTTTTAAGACCATTCATTCCAGTATTGTTTTTCTACAATTTCCCCACCAAGAA 8 16194371 0.991667507 3 8 87 1 1.146128036 0.142857143 0.375 0.642857143 8 0 0 14 2R:16194335-16194392 7 15 723 FBgn0262166 217.8466667 12.40333333 18.96 0.06885577 1.209352325 0.791139241 3 3 3 0.25 dme-miR-277-3p 6mer3-8 TGCATT 2R 16199351 16199356 + 2R_16199351_16199356_+ 0.992868546 0.997691858 0.995280202 0.003410659 CG42837 FBtr0303860 16197515 16199378 2R + 16199318 16199372 3'utr CG42837 FlyBase G16402.1 TTACTTTTGTTACCACGTTTTATATAAAAGAACTGCATTAAATGTTTAAACATTG 22 16199341 0.983602483 6 21 168 0.956521739 1.342422681 0.086956522 0.045454545 0.086956522 22 1 0 22 2R:16199318-16199372 6 CG42837 FBtr0303860 16197515 16199378 TGCATT 6mer3-8 dme-miR-277-3p 2R + 16199333 16199370 3'utr CG42837 FlyBase G12456.1 CGTTTTATATAAAAGAACTGCATTAAATGTTTAAACAT 19 16199341 0.673189151 8 18 137 0.962962963 1.113943352 0 0.315789474 0.518518519 19 0 1 26 2R:16199333-16199370 6 20.5 724 FBgn0262026 104.31 5.966666667 9.106666667 0.196529575 3.43575419 2.251098097 10 10 10 0.25 dme-miR-2a-2-5p 7mer-A1 GATGAGA 2R 16267155 16267161 - 2R_16267155_16267161_- 0.64283906 0.78154394 0.7121915 0.098079105 Khc FBtr0087184 16266958 16267263 2R - 16267113 16267265 stop_codon Khc FlyBase G24030.1 AGATCCAATCACCACCTGTCGCCGCCCAGTTCAGCTCCGCTTTAAACTAAACTAAATGGATTACGTTATACATACTTAACATAACTGATAATTGCCTTCGCTTAGATGAGATGTGTCGCGATCATGTGCAGCGCTTTAAATATACATACATAT 38 16267171 0.83742286 18 37 278 0.978723404 1.662757832 0.14893617 0.236842105 0.382978723 38 1 0 46 2R:16267113-16267265 7 Khc FBtr0087184 16266958 16267263 GATGAGA 7mer-A1 dme-miR-2a-2-5p 2R - 16267121 16267265 stop_codon Khc FlyBase G18192.1 AGATCCAATCACCACCTGTCGCCGCCCAGTTCAGCTCCGCTTTAAACTAAACTAAATGGATTACGTTATACATACTTAACATAACTGATAATTGCCTTCGCTTAGATGAGATGTGTCGCGATCATGTGCAGCGCTTTAAATATAC 30 16267170 0.980552155 14 27 193 0.93877551 1.662757832 0.102040816 0.517241379 0.714285714 29 3 0 46 2R:16267121-16267265 7 8 725 FBgn0001308 2547 83.14 127.7566667 0.00314095 0.096223238 0.062619041 10 9 9.5 0.25 dme-miR-276a-3p 6mer2-7 GTTCCT 2R 16585157 16585162 + 2R_16585157_16585162_+ 0.994505426 0.999565057 0.997035242 0.003577748 Cdk4 FBtr0340063|FBtr0345340|FBtr0087103|FBtr0087104|FBtr0087102 16585034|16585034|16585034|16585034|16585034 16585448|16585448|16585448|16585448|16585448 2R + 16584952 16585184 stop_codon Cdk4 FlyBase G16478.1 AAAATGCTTTCCTACGACCTCCACCTGCGACCATCCGCCTTGGCCTGTTTGGAGCACGATTACTTTCAGCAGGAACCCCTATAGTCTCGATGCCCAGAAGGATAATGGATAATGGATTATGGATTATGGATTATGGATTATGGATGTGGAAGTGAAAGTGGCAGTGGACTGATCATTGCGGCCGCGCTTCGTTCTTGTTACCAATGTTCCTTTAAGTGTAGTGAAGCATTTTG 172 16585156 0.870702173 30 169 1631 0.984615385 1.806179974 0.517948718 0.11627907 0.220512821 172 1 2 192 2R:16584952-16585184 6 Cdk4 FBtr0087102|FBtr0340063|FBtr0345340|FBtr0087103|FBtr0087104 16585034|16585034|16585034|16585034|16585034 16585448|16585448|16585448|16585448|16585448 GTTCCT 6mer2-7 dme-miR-276a-3p 2R + 16585129 16585180 3'utr Cdk4 FlyBase G12519.2 GCGGCCGCGCTTCGTTCTTGTTACCAATGTTCCTTTAAGTGTAGTGAAGCAT 81 16585157 0.709733468 7 79 839 0.992 1.792391689 0.368 0.382716049 0.6 81 0 1 124 2R:16585129-16585180 6 107 726 FBgn0016131 414.8133333 26.95666667 40.80666667 0.25794735 3.969333498 2.622120569 1 0 0.5 0.25 dme-miR-14-3p 8mer-A1 AAGACTGA 2R 16791590 16791597 + 2R_16791590_16791597_+ 0.382889512 0.426245315 0.404567414 0.03065718 CG5522 FBtr0087030|FBtr0087029|FBtr0087031|FBtr0087028|FBtr0087026 16791350|16791350|16791350|16791350|16791350 16792472|16792472|16792472|16792472|16792472 2R + 16791477 16791638 3'utr CG5522 FlyBase G16511.1 ACATCGCTCACTCACTCCCTGAAACGAGGCAACCACAGAACATTCCCGCAACCACAACGAACGAACAAATTGCAGCTTGCATCAGATGAATCGATTTCAAAATGGTATTTCAAAAGACTGACACCGAATGAGAACACGAAGATATAGTAAAGGAGGAGCAGT 357 16791584 0.935187844 20 326 1563 0.920187793 1.639043558 0.241784038 0.145658263 0.284037559 357 26 8 392 2R:16791477-16791638 8 CG5522 FBtr0087026|FBtr0087031|FBtr0087028|FBtr0087030|FBtr0087029 16791350|16791350|16791350|16791350|16791350 16792472|16792472|16792472|16792472|16792472 AAGACTGA 8mer-A1 dme-miR-14-3p 2R + 16791435 16791628 3'utr CG5522 FlyBase G12555.2 CCTTGAAACGTGCACAGCCAAAAAAAAAAACACCCACCCACCACATCGCTCACTCACTCCCTGAAACGAGGCAACCACAGAACATTCCCGCAACCACAACGAACGAACAAATTGCAGCTTGCATCAGATGAATCGATTTCAAAATGGTATTTCAAAAGACTGACACCGAATGAGAACACGAAGATATAGTAAAG 275 16791584 0.964070358 18 243 1174 0.886419753 1.709996409 0.212345679 0.345454545 0.555555556 275 40 6 359 2R:16791435-16791628 8 184.5 727 FBgn0034158 1968.163333 68.45666667 105.0966667 0.09374222 2.695135609 1.755526658 6 6 6 0.25 dme-miR-263a-5p 8mer-A1 GTGCCATA 2R 16792035 16792042 + 2R_16792035_16792042_+ 0.573392735 0.561691659 0.567542197 0.008273856 CG5522 FBtr0087030|FBtr0087029|FBtr0087031|FBtr0087028|FBtr0087026 16791350|16791350|16791350|16791350|16791350 16792472|16792472|16792472|16792472|16792472 2R + 16792015 16792057 3'utr CG5522 FlyBase G16513.1 AACTTAATTTTGCGCAGACTGTGCCATATTAGTTTATAAATTT 37 16792050 0.710439854 10 17 398 0.454545455 0.823908741 0 0.189189189 0.318181818 37 22 2 20 2R:16792015-16792057 8 CG5522 FBtr0087026|FBtr0087031|FBtr0087028|FBtr0087030|FBtr0087029 16791350|16791350|16791350|16791350|16791350 16792472|16792472|16792472|16792472|16792472 GTGCCATA 8mer-A1 dme-miR-263a-5p 2R + 16792020 16792092 3'utr CG5522 FlyBase G12557.1 AATTTTGCGCAGACTGTGCCATATTAGTTTATAAATTTATGTGTCTACACAAACACTGTTGGCCAGCAAACGA 22 16792047 0.992254127 11 14 194 0.653846154 0.753327667 0.038461538 0.136363636 0.269230769 22 7 2 17 2R:16792020-16792092 8 26.5 728 FBgn0034158 1968.163333 68.45666667 105.0966667 0.01346433 0.387106199 0.252148815 -15 -12 -13.5 0.25 dme-miR-970-3p 6mer3-8 TCTTAT 2R 16860106 16860111 + 2R_16860106_16860111_+ 0.992399694 0.997146391 0.994773043 0.003356424 Dek FBtr0100438|FBtr0100436|FBtr0100437|FBtr0332946 16859863|16859863|16859863|16859863 16860358|16860358|16860270|16861738 2R + 16860006 16860108 3'utr Dek FlyBase G16546.1 CCAAGTAGTTGTCTCCTATAAGTATATGATTTGTACTCCTATCCTAAAAGCTATCTGCAGTTCACCTTAATCCTAACGTCAGCGGCAGTCGACTATCCATTCT 26 16860084 0.789470712 15 24 173 0.945945946 1.243038049 0.189189189 0.230769231 0.459459459 26 1 1 35 2R:16860006-16860108 3 Dek FBtr0100437|FBtr0332946|FBtr0100438|FBtr0100436 16859863|16859863|16859863|16859863 16860270|16861738|16860358|16860358 TCTTAT 6mer3-8 dme-miR-970-3p 2R + 16859978 16860175 3'utr Dek FlyBase G12583.1 AGTTGGGCATGGTTCGCGAAATGTAACTCCAAGTAGTTGTCTCCTATAAGTATATGATTTGTACTCCTATCCTAAAAGCTATCTGCAGTTCACCTTAATCCTAACGTCAGCGGCAGTCGACTATCCATTCTTATATATATTCATCTGTATATATAACTTTTTATTTGTCCAACCGTGCGCACGCATGCACATCATTTT 31 16860103 0.978654424 22 29 243 0.9375 1.352182518 0.145833333 0.483870968 0.666666667 31 2 1 45 2R:16859978-16860175 6 3.5 729 FBgn0026533 3518.623333 168.86 259.8033333 0.000994707 0.02072723 0.013471729 22 3 12.5 0.25 dme-miR-304-5p 7mer-m8 TGAGATT 2R 16952530 16952536 + 2R_16952530_16952536_+ 0.620199086 0.620151581 0.620175334 3.36E-05 CG34191 FBtr0112384|FBtr0340071 16952500|16952500 16952581|16952581 2R + 16952513 16952570 3'utr CG34191 FlyBase G16563.1 CCATCTTATTTACCCTTTGAGATTTTCCCCCTTTTTGATGCTTATTAAATGTTAAACA 56 16952529 0.805840238 10 54 619 0.971830986 1.838849091 0 0.232142857 0.394366197 56 2 0 69 2R:16952513-16952570 7 CG34191 FBtr0340071|FBtr0112384 16952500|16952500 16952581|16952581 TGAGATT 7mer-m8 dme-miR-304-5p 2R + 16952511 16952567 3'utr CG34191 FlyBase G12597.1 TCCCATCTTATTTACCCTTTGAGATTTTCCCCCTTTTTGATGCTTATTAAATGTTAA 24 16952529 0.765002373 7 24 248 1 1.544068044 0.085714286 0.291666667 0.514285714 24 0 0 35 2R:16952511-16952567 7 28.5 730 FBgn0085220 88.66666667 25.16333333 38.02 0.321428571 1.132600344 0.749605471 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 17008240 17008245 - 2R_17008240_17008245_- 0.886152394 0.879826981 0.882989687 0.004472733 Ehbp1 FBtr0114628|FBtr0114628|FBtr0114628|FBtr0340073|FBtr0340073|FBtr0340073|FBtr0114627|FBtr0114627|FBtr0114627|FBtr0087019|FBtr0087019|FBtr0087019 17007904|17007904|17007904|17007672|17007672|17007672|17007904|17007904|17007904|17007904|17007904|17007904 17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454 2R - 17008151 17008270 3'utr Ehbp1 FlyBase G24181.1 TGGTTATTAAAAAAAAAAAGGTATACTGTGAAACAAAACAAATTGCTTTTGTATTTAAGCAAAACAATTCAAGAAATAAGAACAAAACGTCCGTTAGTGAACTAAGTAAAAAGACAGGCA 413 17008247 0.787176222 15 393 1581 0.958515284 2.040404529 0.034934498 0.099273608 0.187772926 413 16 3 439 2R:17008151-17008270 6 Ehbp1 FBtr0087019|FBtr0087019|FBtr0087019|FBtr0114627|FBtr0114627|FBtr0114627|FBtr0340073|FBtr0340073|FBtr0340073|FBtr0114628|FBtr0114628|FBtr0114628 17007904|17007904|17007904|17007904|17007904|17007904|17007672|17007672|17007672|17007904|17007904|17007904 17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454|17008454 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 17008207 17008284 3'utr Ehbp1 FlyBase G18305.1 TGGACCACTTGGTATGGTTATTAAAAAAAAAAAGGTATACTGTGAAACAAAACAAATTGCTTTTGTATTTAAGCAAAA 160 17008247 0.922222315 5 156 541 0.973568282 1.645422269 0 0.3125 0.515418502 160 2 4 221 2R:17008207-17008284 6 199 731 FBgn0034180 1913.18 55.65333333 85.13666667 0.104015304 3.575706756 2.337418269 2 2 2 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 17016685 17016691 - 2R_17016685_17016691_- 0.801612322 0.800208226 0.800910274 0.000992849 CG8963 FBtr0087017|FBtr0087017|FBtr0087017|FBtr0300573|FBtr0300573|FBtr0300573|FBtr0340126|FBtr0340126|FBtr0340126|FBtr0087016|FBtr0087016|FBtr0087016 17016224|17016224|17016224|17016344|17016344|17016344|17016344|17016344|17016344|17016344|17016344|17016344 17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965 2R - 17016641 17016731 3'utr CG8963 FlyBase G24205.1 AATATGACATGTGTTAATGACTTTGTTCGAACGCTTTTTGTGTGATACGCCCGTTTTGTATCTCTGATAACTAACTCTCTGCCATGATAGC 29 17016693 0.987794464 14 29 257 1 1.602059991 0.3 0.24137931 0.45 29 0 0 40 2R:17016641-17016731 7 CG8963 FBtr0340126|FBtr0340126|FBtr0340126|FBtr0087016|FBtr0087016|FBtr0087016|FBtr0087017|FBtr0087017|FBtr0087017|FBtr0300573|FBtr0300573|FBtr0300573 17016344|17016344|17016344|17016344|17016344|17016344|17016224|17016224|17016224|17016344|17016344|17016344 17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 17016663 17016715 3'utr CG8963 FlyBase G18326.1 ATGACTTTGTTCGAACGCTTTTTGTGTGATACGCCCGTTTTGTATCTCTGATA 14 17016695 0.751333013 7 13 136 0.863636364 1.278753601 0.181818182 0.428571429 0.636363636 14 3 0 19 2R:17016663-17016715 7 15.5 732 FBgn0034181 880.38 38.95666667 59.94333333 0.017606034 0.397877984 0.258577545 2 4 3 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 17016757 17016763 - 2R_17016757_17016763_- 0.570244808 0.625492562 0.597868685 0.039066094 CG8963 FBtr0087017|FBtr0087017|FBtr0087017|FBtr0300573|FBtr0300573|FBtr0300573|FBtr0340126|FBtr0340126|FBtr0340126|FBtr0087016|FBtr0087016|FBtr0087016 17016224|17016224|17016224|17016344|17016344|17016344|17016344|17016344|17016344|17016344|17016344|17016344 17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965 2R - 17016738 17016896 3'utr CG8963 FlyBase G24206.1 GGTATAGGAGGGATGGTGGAGAGCGTAGGAGTGGAGCATTTCCAACAAATTCTCGGTTGTAGGATCGATGATTGCAGTTGCTTGGTTCAGAACCAATTGTGATTATCTTTTAAATTATTGATAGCAAATTGTTTGTGATATCTTCGTGTTTCATGCACC 49 17016765 0.988369235 18 46 421 0.949152542 1.748188027 0.288135593 0.183673469 0.322033898 49 3 0 56 2R:17016738-17016896 7 CG8963 FBtr0340126|FBtr0340126|FBtr0340126|FBtr0087016|FBtr0087016|FBtr0087016|FBtr0087017|FBtr0087017|FBtr0087017|FBtr0300573|FBtr0300573|FBtr0300573 17016344|17016344|17016344|17016344|17016344|17016344|17016224|17016224|17016224|17016344|17016344|17016344 17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 17016736 17016780 3'utr CG8963 FlyBase G18327.1 ATTGATAGCAAATTGTTTGTGATATCTTCGTGTTTCATGCACCTA 21 17016765 0.989504091 7 21 207 1 1.531478917 0.264705882 0.476190476 0.676470588 21 0 0 34 2R:17016736-17016780 7 24 733 FBgn0034181 880.38 38.95666667 59.94333333 0.027260955 0.616069137 0.400378135 2 2 2 0.25 dme-miR-283-5p 7mer-m8 TGATATT 2R 17025158 17025164 + 2R_17025158_17025164_+ 0.5446466 0.568744253 0.556695426 0.017039647 Dark FBtr0086967 17023336 17026703 2R + 17025100 17025178 3'utr Dark FlyBase G16608.1 CTCAAACAGGTCAGTCCCAACATTCTGGTGGCGTCGGCACACAGTGCCCAGAAGACTGTGATATTCCAGCTGGAAAAGA 23 17025162 0.96525622 7 22 117 0.964285714 1.130333768 0.142857143 0.173913043 0.321428571 23 0 1 27 2R:17025100-17025178 7 Dark FBtr0086967 17023336 17026703 TGATATT 7mer-m8 dme-miR-283-5p 2R + 17025111 17025177 3'utr Dark FlyBase G12631.1 CAGTCCCAACATTCTGGTGGCGTCGGCACACAGTGCCCAGAAGACTGTGATATTCCAGCTGGAAAAG 16 17025162 0.952402022 6 16 73 1 1.431363764 0.222222222 0.375 0.62962963 16 0 0 27 2R:17025111-17025177 7 17 734 FBgn0263864 792.71 19.97666667 30.85666667 0.021445421 0.850992825 0.550934428 -4 -4 -4 0.25 dme-miR-283-5p 6mer3-8 TGATAT 2R 17026612 17026617 + 2R_17026612_17026617_+ 0.77798423 0.919863242 0.848923736 0.100323603 Dark FBtr0086968|FBtr0086967 17026427|17023336 17026703|17026703 2R + 17026598 17026634 3'utr Dark FlyBase G16611.1 CAGCTAACCAAGTATGATATCTCAGAGGGCGGTGGGT 11 17026612 0.749278143 2 10 57 0.923076923 1.079181246 0.692307692 0.181818182 0.307692308 11 1 0 12 2R:17026598-17026634 6 Dark FBtr0086968|FBtr0086967 17026427|17023336 17026703|17026703 TGATAT 6mer3-8 dme-miR-283-5p 2R + 17026595 17026637 3'utr Dark FlyBase G12633.1 ATGCAGCTAACCAAGTATGATATCTCAGAGGGCGGTGGGTGCG 8 17026612 0.762766389 3 8 45 1 1.113943352 0.769230769 0.5 0.692307692 8 0 0 13 2R:17026595-17026637 6 9.5 735 FBgn0263864 792.71 19.97666667 30.85666667 0.011984206 0.475554814 0.307875122 0 0 0 0.25 dme-miR-968-5p 6mer3-8 ACTACT 2R 17044445 17044450 + 2R_17044445_17044450_+ 0.954985788 0.861606177 0.908295983 0.066029348 RhoGEF2 FBtr0086969|FBtr0086970|FBtr0305083|FBtr0340124|FBtr0086971 17044319|17044319|17044319|17044319|17044319 17044653|17044653|17044653|17044653|17044653 2R + 17044421 17044542 3'utr RhoGEF2 FlyBase G16657.1 AGCCTTTCTTAGAGCATGCCTTTTACTACTGTTAATGTAGCTTCATTTGTTTTCTTAAAATATTATGTATTCCACAAGAGCCGATAACACTTTAAATTAAGTCTAACATTGTCCCCTCGTAA 27 17044441 0.840200575 14 27 195 1 1.462397998 0.068965517 0.074074074 0.137931034 27 0 0 29 2R:17044421-17044542 6 RhoGEF2 FBtr0086969|FBtr0086971|FBtr0340124|FBtr0305083|FBtr0086970 17044319|17044319|17044319|17044319|17044319 17044653|17044653|17044653|17044653|17044653 ACTACT 6mer3-8 dme-miR-968-5p 2R + 17044416 17044451 3'utr RhoGEF2 FlyBase G12669.1 CGAGTAGCCTTTCTTAGAGCATGCCTTTTACTACTG 11 17044442 0.690506111 4 9 93 0.875 0.84509804 0.1875 0.272727273 0.5 11 1 1 14 2R:17044416-17044451 6 8 736 FBgn0023172 2916.61 41.36666667 63.45333333 0.00274291 0.193392425 0.126076907 4 3 3.5 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 17092972 17092979 + 2R_17092972_17092979_+ 0.625363603 0.625255035 0.625309319 7.68E-05 CG6984 FBtr0086979 17092926 17093070 2R + 17092942 17092992 3'utr CG6984 FlyBase G16685.1 ATGAAATAATGAATCAAAACTGACCAATTGTGCATTTATACTTTTAAGCTT 29 17092970 0.853743806 8 28 236 1 1.544068044 0 0.172413793 0.314285714 29 0 0 35 2R:17092942-17092992 8 CG6984 FBtr0086979 17092926 17093070 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 17092944 17093002 3'utr CG6984 FlyBase G12690.1 GAAATAATGAATCAAAACTGACCAATTGTGCATTTATACTTTTAAGCTTGAATTGTCCA 22 17092969 0.991127551 9 20 210 0.9375 1.176091259 0.09375 0.409090909 0.59375 22 1 1 30 2R:17092944-17093002 8 23 737 FBgn0034191 139.3066667 16.87666667 25.83666667 0.165103369 1.362828363 0.890207715 2 3 2.5 0.25 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2R 17139564 17139570 - 2R_17139564_17139570_- 0.603684299 0.533085672 0.568384985 0.049920749 CG43103 FBtr0304891|FBtr0304891 17139448|17139448 17139638|17139638 2R - 17139565 17139604 3'utr CG43103 FlyBase G24240.1 TATCAGAACGTGCTACAAGCTGTGTTTTTATTGATACTTA 10 17139578 0.834868946 6 10 100 1 1.204119983 0 0.4 0.625 10 0 0 16 2R:17139565-17139604 5 CG43103 FBtr0304891|FBtr0304891 17139448|17139448 17139638|17139638 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2R - 17139565 17139633 3'utr CG43103 FlyBase G18355.1 CAAGCTCTGAAGATCGATTTAAAGTTCAATATCAGAACGTGCTACAAGCTGTGTTTTTATTGATACTTA 11 17139579 0.758944397 8 11 88 1 1.079181246 0.25 0.090909091 0.166666667 11 0 0 12 2R:17139565-17139633 5 2.5 738 FBgn0262563 14 4.063333333 6.323333333 0.178571429 0.615258409 0.395361096 8 9 8.5 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 17364026 17364033 + 2R_17364026_17364033_+ 0.450150128 0.455557713 0.45285392 0.003823751 mbl FBtr0336940|FBtr0306604|FBtr0306606|FBtr0306603|FBtr0336941|FBtr0306601|FBtr0336942 17363985|17363985|17363985|17363985|17363985|17363985|17363985 17365386|17365386|17365386|17365386|17365386|17365386|17365386 2R + 17363975 17364093 stop_codon mbl FlyBase G16726.1 AAGACCTCCTAAGAACCCGGGCGATAACAATCTAAAAGTCCAAACACAACTGTACTTAATGCACCAAGCCATCGAACAGATGGAATAGTCACACCATTTTAGATTTATAGATATAAACA 304 17364025 0.959092407 10 299 1403 0.986072423 2.549003262 0.08356546 0.138157895 0.270194986 304 5 0 354 2R:17363975-17364093 8 mbl FBtr0336942|FBtr0306603|FBtr0336941|FBtr0306601|FBtr0306604|FBtr0306606|FBtr0336940 17363985|17363985|17363985|17363985|17363985|17363985|17363985 17365386|17365386|17365386|17365386|17365386|17365386|17365386 GTACTTAA 8mer-A1 dme-miR-252-5p 2R + 17364000 17364092 3'utr mbl FlyBase G12713.1 AACAATCTAAAAGTCCAAACACAACTGTACTTAATGCACCAAGCCATCGAACAGATGGAATAGTCACACCATTTTAGATTTATAGATATAAAC 195 17364025 0.892764008 6 188 905 0.967213115 2.16879202 0.101639344 0.394871795 0.613114754 195 9 1 295 2R:17364000-17364092 8 239 739 FBgn0265487 1263.543333 28.89333333 44.05 0.189150616 8.271804338 5.425652667 1 1 1 0.25 dme-miR-999-3p 7mer-m8 AGTTAAC 2R 17364465 17364471 + 2R_17364465_17364471_+ 0.671798676 0.600039625 0.635919151 0.050741346 mbl FBtr0336940|FBtr0306604|FBtr0306606|FBtr0306603|FBtr0336941|FBtr0306601|FBtr0336942 17363985|17363985|17363985|17363985|17363985|17363985|17363985 17365386|17365386|17365386|17365386|17365386|17365386|17365386 2R + 17364410 17364486 3'utr mbl FlyBase G16728.1 GAGAAACAGATGTTAGATGATAGTAATACTTAAGTTCCTTTTTTGAATAGCTCTTAGTTAACTCTAGTTTATAGGAA 10 17364463 0.937767874 7 9 97 0.916666667 1.041392685 0 0.2 0.333333333 10 1 0 11 2R:17364410-17364486 7 mbl FBtr0336942|FBtr0306603|FBtr0336941|FBtr0306601|FBtr0306604|FBtr0306606|FBtr0336940 17363985|17363985|17363985|17363985|17363985|17363985|17363985 17365386|17365386|17365386|17365386|17365386|17365386|17365386 AGTTAAC 7mer-m8 dme-miR-999-3p 2R + 17364397 17364496 3'utr mbl FlyBase G12716.1 CAAGCGAACGGAAGAGAAACAGATGTTAGATGATAGTAATACTTAAGTTCCTTTTTTGAATAGCTCTTAGTTAACTCTAGTTTATAGGAAACGGTCACAC 11 17364449 0.989237958 8 10 93 1 1.176091259 0 0.363636364 0.533333333 11 0 0 15 2R:17364397-17364496 7 4 740 FBgn0265487 1263.543333 28.89333333 44.05 0.003165701 0.13844024 0.090805902 2 16 9 0.25 dme-miR-184-3p 6mer2-7 CCGTCC 2R 17364695 17364700 + 2R_17364695_17364700_+ 0.970535729 0.990125058 0.980330393 0.013851798 mbl FBtr0336940|FBtr0306604|FBtr0306606|FBtr0306603|FBtr0336941|FBtr0306601|FBtr0336942 17363985|17363985|17363985|17363985|17363985|17363985|17363985 17365386|17365386|17365386|17365386|17365386|17365386|17365386 2R + 17364617 17364722 3'utr mbl FlyBase G16730.1 AAACCTCTAATGCTGCTGCCGATGCTGGGTACAGTTGTGTATGCTTGTTGCTAGCTGCGGGTGCTTAATGCCATATTGCCGTCCCTGTCTCCCAAATGCGGTAGTT 165 17364693 0.768736806 15 159 1188 0.969543147 1.803912113 0.147208122 0.145454545 0.284263959 165 4 2 191 2R:17364617-17364722 6 mbl FBtr0336942|FBtr0306603|FBtr0336941|FBtr0306601|FBtr0306604|FBtr0306606|FBtr0336940 17363985|17363985|17363985|17363985|17363985|17363985|17363985 17365386|17365386|17365386|17365386|17365386|17365386|17365386 CCGTCC 6mer2-7 dme-miR-184-3p 2R + 17364679 17364721 3'utr mbl FlyBase G12718.1 GCTTAATGCCATATTGCCGTCCCTGTCTCCCAAATGCGGTAGT 62 17364693 0.745579698 5 58 426 0.947916667 1.959041392 0.135416667 0.370967742 0.59375 62 5 0 91 2R:17364679-17364721 6 104 741 FBgn0265487 1263.543333 28.89333333 44.05 0.082308218 3.599446239 2.360953462 2 2 2 0.25 dme-miR-7-5p 7mer-m8 GTCTTCC 2R 17414419 17414425 - 2R_17414419_17414425_- 0.705948251 0.705726476 0.705837363 0.000156836 cnk FBtr0086962|FBtr0340214 17413968|17413968 17414572|17414572 2R - 17414401 17414476 3'utr cnk FlyBase G24265.1 ATATAGCGATATTCTCGTACGATTTAGGTATACAACTTGTTCATTTTGATCGTCTTCCCTGTCTGTCCACCAGAAA 93 17414422 0.697757003 14 89 1018 0.963302752 1.720159303 0.220183486 0.150537634 0.275229358 93 3 1 105 2R:17414401-17414476 7 cnk FBtr0086962|FBtr0340214 17413968|17413968 17414572|17414572 GTCTTCC 7mer-m8 dme-miR-7-5p 2R - 17414402 17414486 3'utr cnk FlyBase G18369.1 TATATATTATATATAGCGATATTCTCGTACGATTTAGGTATACAACTTGTTCATTTTGATCGTCTTCCCTGTCTGTCCACCAGAA 65 17414422 0.991835438 14 65 715 1 1.986771734 0.206185567 0.369230769 0.577319588 65 0 0 97 2R:17414402-17414486 7 73.5 742 FBgn0021818 1145.12 24.51333333 37.43 0.064185413 2.998368235 1.963665509 -3 -3 -3 0.25 dme-miR-184-5p 6mer3-8 TGATAA 2R 17448658 17448663 - 2R_17448658_17448663_- 0.791866441 0.995908399 0.89388742 0.144279482 mthl3 FBtr0340211|FBtr0340212|FBtr0086955 17448531|17448531|17448531 17449117|17449117|17449117 2R - 17448608 17448823 3'utr mthl3 FlyBase G24317.1 GTGCCATCAAAGCGAGATCAAAGCAACTACTACATGGGGATATGTACGAATCTTATAGGCATGAATACTCGGCATTTATATACCCTGGTCTATTATTATGGATGGAGGATAAAAACTCAGGAAAATACTTTTCGCATCAGCACTTATGTATGCTCACTCGTGATAATAATTTCGTAATAATTCGTACTGTTTTTACTGCCTCAACTTAATTCAAAG 61 17448657 0.971349439 24 58 411 0.961038961 1.86923172 0.233766234 0.196721311 0.363636364 61 3 0 74 2R:17448608-17448823 6 mthl3 FBtr0086955|FBtr0340212|FBtr0340211 17448531|17448531|17448531 17449117|17449117|17449117 TGATAA 6mer3-8 dme-miR-184-5p 2R - 17448646 17448790 3'utr mthl3 FlyBase G18404.1 ATGGGGATATGTACGAATCTTATAGGCATGAATACTCGGCATTTATATACCCTGGTCTATTATTATGGATGGAGGATAAAAACTCAGGAAAATACTTTTCGCATCAGCACTTATGTATGCTCACTCGTGATAATAATTTCGTAAT 28 17448693 0.949251958 19 25 189 0.948717949 1.091080469 0.102564103 0.321428571 0.512820513 28 0 2 37 2R:17448646-17448790 6 20.5 743 FBgn0028956 336.38 20.09333333 30.48333333 0.060942981 1.020238885 0.672498633 -6 30 12 0.25 dme-miR-980-3p 7mer-m8 GGCAGCT 2R 17465345 17465351 + 2R_17465345_17465351_+ 0.475508513 0.445539616 0.460524065 0.021191212 CG14478 FBtr0345418|FBtr0086921|FBtr0086922|FBtr0345417 17464232|17464232|17464232|17464232 17465795|17465580|17465580|17465580 2R + 17465323 17465372 3'utr CG14478 FlyBase G16790.1 TTCCTTGACTACCACCACCCATGGCAGCTTCCTGGGAGCTCCATTGGGGG 51 17465344 0.985752785 2 49 222 0.946428571 1.72427587 0.142857143 0.098039216 0.178571429 51 3 0 53 2R:17465323-17465372 7 CG14478 FBtr0345417|FBtr0086922|FBtr0086921|FBtr0345418 17464232|17464232|17464232|17464232 17465580|17465580|17465580|17465795 GGCAGCT 7mer-m8 dme-miR-980-3p 2R + 17465315 17465365 3'utr CG14478 FlyBase G12770.1 ACGCAAACTTCCTTGACTACCACCACCCATGGCAGCTTCCTGGGAGCTCCA 30 17465344 0.99460853 3 30 130 1 1.612783857 0.12195122 0.366666667 0.536585366 30 0 0 41 2R:17465315-17465365 7 39.5 744 FBgn0028953 686.9066667 21.63 33.22666667 0.057504173 1.82616736 1.188804173 1 1 1 0.25 dme-miR-304-5p 8mer-A1 TGAGATTA 2R 17473681 17473688 + 2R_17473681_17473688_+ 0.623001634 0.624844237 0.623922935 0.001302915 qkr54B FBtr0306248|FBtr0331464 17472244|17473146 17474648|17475129 2R + 17473656 17473703 3'utr qkr54B FlyBase G16798.1 TGACGGTCGGTAGAGACAGAATCTATGAGATTAATTAACTTAATAGAA 14 17473681 0.981784032 2 14 95 1 1.278753601 0 0.214285714 0.421052632 14 0 0 19 2R:17473656-17473703 8 qkr54B FBtr0306248|FBtr0331464 17472244|17473146 17474648|17475129 TGAGATTA 8mer-A1 dme-miR-304-5p 2R + 17473656 17473704 3'utr qkr54B FlyBase G12775.1 TGACGGTCGGTAGAGACAGAATCTATGAGATTAATTAACTTAATAGAAT 10 17473681 0.783293786 3 8 68 0.714285714 0.698970004 0 0.2 0.428571429 10 3 1 10 2R:17473656-17473704 8 10 745 FBgn0022987 869.43 42.83333333 65.55 0.011501789 0.233463035 0.152555301 0 0 0 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 17517269 17517276 + 2R_17517269_17517276_+ 0.495644221 0.498636812 0.497140517 0.002116088 CG4853 FBtr0340216|FBtr0086938|FBtr0086939 17517103|17517103|17517103 17517445|17517445|17517445 2R + 17517246 17517282 3'utr CG4853 FlyBase G16812.1 ACTTCCACTGTGTTTGTTAATTTGTACTTAAGCTTAG 17 17517268 0.755638286 4 17 189 1 1.278753601 0.157894737 0.117647059 0.210526316 17 0 0 19 2R:17517246-17517282 8 CG4853 FBtr0086939|FBtr0340216|FBtr0086938 17517103|17517103|17517103 17517445|17517445|17517445 GTACTTAA 8mer-A1 dme-miR-252-5p 2R + 17517231 17517289 3'utr CG4853 FlyBase G12784.1 AATAATAACTCTTACACTTCCACTGTGTTTGTTAATTTGTACTTAAGCTTAGACGACGG 18 17517268 0.855340985 6 17 161 0.962962963 1.414973348 0.259259259 0.388888889 0.592592593 18 1 0 26 2R:17517231-17517289 8 16 746 FBgn0034230 943.6633333 39.8 60.59666667 0.016955199 0.40201005 0.264040926 1 1 1 0.25 dme-miR-965-3p 8mer-A1 TACGCTTA 2R 17555736 17555743 + 2R_17555736_17555743_+ 0.428307738 0.448634339 0.438471038 0.014373077 MESR4 FBtr0086946|FBtr0113090|FBtr0340220|FBtr0340219 17555653|17555653|17555653|17555653 17556289|17556289|17556289|17556289 2R + 17555705 17555792 3'utr MESR4 FlyBase G16855.2 CTATAACTACAAACCCCACTACAGAATGGATTACGCTTATTAATTGATAAAAACATATAGTCGCTCATCCCTGGCGATCGTCTAAGGA 1513 17555735 0.834839678 14 1488 12703 0.983954155 2.535800291 0.026361032 0.134170522 0.249283668 1513 24 4 1717 2R:17555705-17555792 8 MESR4 FBtr0340219|FBtr0340220|FBtr0113090|FBtr0086946 17555653|17555653|17555653|17555653 17556289|17556289|17556289|17556289 TACGCTTA 8mer-A1 dme-miR-965-3p 2R + 17555655 17555797 3'utr MESR4 FlyBase G12825.1 ATGAACACGGATTAACTGCATCATTGGTTCCTCCTACCACAAATAAACAACTATAACTACAAACCCCACTACAGAATGGATTACGCTTATTAATTGATAAAAACATATAGTCGCTCATCCCTGGCGATCGTCTAAGGATAAGA 808 17555735 0.825484833 20 790 6518 0.981974922 2.49589108 0.028996865 0.403465347 0.622257053 808 20 3 1253 2R:17555655-17555797 8 1144.5 747 FBgn0034240 1589.276667 23.95 36.81 0.720138931 47.78705637 31.09209454 1 1 1 0.25 dme-miR-980-3p 7mer-m8 GGCAGCT 2R 17572155 17572161 + 2R_17572155_17572161_+ 0.616331139 0.608294722 0.612312931 0.005682593 POSH FBtr0086828 17572001 17572322 2R + 17572120 17572180 3'utr POSH FlyBase G16875.1 AAAAAGAAACCGTTTTGTACTCTTCCAATCGAATGGGCAGCTCGCCGTTGTACTTTTTTAT 94 17572153 0.934780543 9 90 665 0.951456311 1.991226076 0.330097087 0.085106383 0.165048544 94 5 0 98 2R:17572120-17572180 7 POSH FBtr0086828 17572001 17572322 GGCAGCT 7mer-m8 dme-miR-980-3p 2R + 17572127 17572179 3'utr POSH FlyBase G12838.1 AACCGTTTTGTACTCTTCCAATCGAATGGGCAGCTCGCCGTTGTACTTTTTTA 71 17572153 0.931401221 9 67 478 0.942307692 1.514104821 0.182692308 0.338028169 0.548076923 71 4 2 98 2R:17572127-17572179 7 76.5 748 FBgn0040294 488.92 18.72 28.71333333 0.156467316 4.086538462 2.664267472 2 2 2 0.25 dme-miR-305-3p 8mer-m1 ATGTGCCG 2R 17573205 17573212 + 2R_17573205_17573212_+ 0.627636497 0.594086035 0.610861266 0.023723786 CG42239 FBtr0290307 17573200 17573330 2R + 17573156 17573220 stop_codon CG42239 FlyBase G16880.1 TAATTGCTATCAAGACTACGAACCAGAGAAGCAAAAGGATACGTAGACTATGTGCCGGGTTGGAT 23 17573206 0.750190263 11 22 103 0.96 1.380211242 0.36 0.086956522 0.16 23 1 0 24 2R:17573156-17573220 8 CG42239 FBtr0290307 17573200 17573330 ATGTGCCG 8mer-m1 dme-miR-305-3p 2R + 17573179 17573226 stop_codon CG42239 FlyBase G12841.2 CAGAGAAGCAAAAGGATACGTAGACTATGTGCCGGGTTGGATTACCAG 32 17573206 0.636370999 5 30 147 0.9375 1.352182518 0.395833333 0.375 0.583333333 32 2 1 45 2R:17573179-17573226 8 23.5 749 FBgn0250868 189.67 62.33666667 95.58 0.123899404 0.376985188 0.245867336 -1 -1 -1 0.25 dme-miR-11-3p 7mer-m1 TGTGATG 2R 17573277 17573283 + 2R_17573277_17573283_+ 0.599432665 0.600941743 0.600187204 0.001067024 CG42239 FBtr0290307 17573200 17573330 2R + 17573247 17573298 3'utr CG42239 FlyBase G16881.1 TTTATTGCATATATGTATGTATGCAAATTGTGTGATGAATAGAAGAGGGTTT 29 17573275 0.977089508 6 27 214 0.916666667 1.51851394 0.333333333 0.24137931 0.388888889 29 3 0 33 2R:17573247-17573298 7 CG42239 FBtr0290307 17573200 17573330 TGTGATG 7mer-m1 dme-miR-11-3p 2R + 17573238 17573302 3'utr CG42239 FlyBase G12842.1 TTTTATACTTTTATTGCATATATGTATGTATGCAAATTGTGTGATGAATAGAAGAGGGTTTTTGA 30 17573275 0.982820351 6 30 232 1 1.653212514 0.244444444 0.433333333 0.622222222 30 0 0 45 2R:17573238-17573302 7 28.5 750 FBgn0250868 189.67 62.33666667 95.58 0.15026098 0.457194802 0.298179535 2 2 2 0.25 dme-bantam-3p 6mer3-8 TGATCT 2R 17574846 17574851 + 2R_17574846_17574851_+ 0.999994726 0.985778784 0.992886755 0.010052159 Rab4 FBtr0086830 17574541 17574979 2R + 17574769 17574865 3'utr Rab4 FlyBase G16890.1 ACTTACTATAATTTGTAATTCGTGAAGCACTAGAGCCCTCGAGCAACAAATGATGTATGGCTATAAGCACATGGATCTGATCTAGAGGATGAACAGA 27 17574846 0.966987433 11 25 137 0.939393939 1.491361694 0.575757576 0.185185185 0.333333333 27 2 0 31 2R:17574769-17574865 6 Rab4 FBtr0086830 17574541 17574979 TGATCT 6mer3-8 dme-bantam-3p 2R + 17574817 17574886 3'utr Rab4 FlyBase G12847.1 AATGATGTATGGCTATAAGCACATGGATCTGATCTAGAGGATGAACAGAATACACTCGGCATTTTTAATG 17 17574858 0.958350866 7 17 89 1 1.447158031 0.357142857 0.411764706 0.642857143 17 0 0 28 2R:17574817-17574886 6 14.5 751 FBgn0016701 790.7133333 73.45333333 112.1433333 0.018337872 0.197404248 0.129298814 0 -12 -6 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 17673099 17673105 - 2R_17673099_17673105_- 0.794735447 0.796142954 0.795439201 0.000995324 Sema-1b FBtr0086891|FBtr0086891|FBtr0086891|FBtr0086890|FBtr0086890|FBtr0086890 17672837|17672837|17672837|17672837|17672837|17672837 17674309|17674309|17674309|17674309|17674309|17674309 2R - 17673061 17673131 3'utr Sema-1b FlyBase G24433.1 AAACGTAATGTAATGATTTCTCATATTGTGATAGATTTTATTGAAATTTTAGAAAGATGAAATGATATGCC 147 17673106 0.991906343 8 140 1552 0.956756757 1.645913275 0.459459459 0.210884354 0.372972973 147 5 3 177 2R:17673061-17673131 7 Sema-1b FBtr0086890|FBtr0086890|FBtr0086890|FBtr0086891|FBtr0086891|FBtr0086891 17672837|17672837|17672837|17672837|17672837|17672837 17674309|17674309|17674309|17674309|17674309|17674309 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 17673090 17673132 3'utr Sema-1b FlyBase G18485.1 AAAACGTAATGTAATGATTTCTCATATTGTGATAGATTTTATT 95 17673106 0.751582062 6 93 987 0.98630137 1.857332496 0.328767123 0.347368421 0.575342466 95 1 1 144 2R:17673090-17673132 7 120 752 FBgn0016059 2585.713333 78.05 119.2733333 0.046408857 1.537475977 1.006092449 1 1 1 0.25 dme-miR-282-5p 6mer2-7 GAGGCT 2R 17673567 17673572 - 2R_17673567_17673572_- 0.976271697 0.976198385 0.976235041 5.18E-05 Sema-1b FBtr0086891|FBtr0302161|FBtr0086890 17672837|17673285|17672837 17674309|17674309|17674309 2R - 17673537 17673638 3'utr Sema-1b FlyBase G24435.1 TAAGGAATTGAACATAGAATGTAATTAAAAGTACGAACTAGGCTAAGAAACGAAGAAAACTTCTATGAGGCTGTTTGATAAGAACTGACACCGCAGCCCCCA 250 17673573 0.99021527 11 243 1776 0.975945017 1.976197085 0.18556701 0.144 0.264604811 250 5 2 284 2R:17673537-17673638 6 Sema-1b FBtr0086890|FBtr0302161|FBtr0086891 17672837|17673285|17672837 17674309|17674309|17674309 GAGGCT 6mer2-7 dme-miR-282-5p 2R - 17673535 17673594 3'utr Sema-1b FlyBase G18488.1 AAGAAACGAAGAAAACTTCTATGAGGCTGTTTGATAAGAACTGACACCGCAGCCCCCACA 170 17673573 0.981792446 8 163 1198 0.958333333 1.662757832 0.2375 0.311764706 0.5125 170 6 4 230 2R:17673535-17673594 6 202.5 753 FBgn0016059 2585.713333 78.05 119.2733333 0.078314946 2.594490711 1.697781007 1 1 1 0.25 dme-bantam-3p 6mer2-7 GATCTC 2R 17690185 17690190 + 2R_17690185_17690190_+ 0.999180246 0.999859434 0.99951984 0.000480267 HPS4 FBtr0086839|FBtr0086840 17690041|17690041 17690822|17690822 2R + 17690145 17690210 3'utr HPS4 FlyBase G16946.1 GAATAGCCAACTTAATGCCATCCACTGTTATTTCATTTGCGATCTCTGGCTGATTCCTTCGTGAGT 258 17690181 0.890951336 11 244 2630 0.948717949 1.772321707 0.298076923 0.186046512 0.326923077 258 12 4 296 2R:17690145-17690210 6 HPS4 FBtr0086839|FBtr0086840 17690041|17690041 17690822|17690822 GATCTC 6mer2-7 dme-bantam-3p 2R + 17690130 17690211 3'utr HPS4 FlyBase G12894.1 GTCTGGGTCCCCGAAGAATAGCCAACTTAATGCCATCCACTGTTATTTCATTTGCGATCTCTGGCTGATTCCTTCGTGAGTC 153 17690181 0.879159978 15 140 1519 0.894495413 1.511883361 0.408256881 0.320261438 0.52293578 153 18 5 195 2R:17690130-17690211 6 157.5 754 FBgn0034261 255.3 8.836666667 13.49666667 0.616921269 17.82346284 11.66954804 4 4 4 0.25 dme-miR-1012-3p 6mer3-8 TTGACT 2R 17734456 17734461 - 2R_17734456_17734461_- 0.746947942 0.873925451 0.810436696 0.089786722 CG6406 FBtr0086883|FBtr0086884 17734417|17734417 17735315|17735315 2R - 17734426 17734474 3'utr CG6406 FlyBase G24467.1 TATTTATTGAACGTTGACTTGAACCATGTTATTGATTTAAAATAAATAC 9 17734461 0.938153825 3 9 82 1 0.954242509 0.222222222 0 0 9 0 0 9 2R:17734426-17734474 6 CG6406 FBtr0086883|FBtr0086884 17734417|17734417 17735315|17735315 TTGACT 6mer3-8 dme-miR-1012-3p 2R - 17734427 17734483 3'utr CG6406 FlyBase G18510.1 ACATACAAATATTTATTGAACGTTGACTTGAACCATGTTATTGATTTAAAATAAATA 9 17734461 0.75691775 5 9 78 1 1.113943352 0.076923077 0.222222222 0.461538462 9 0 0 13 2R:17734427-17734483 6 8.5 755 FBgn0034269 376.6666667 16.84333333 25.91666667 0.022566372 0.504650703 0.327974277 0 0 0 0.25 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 17734916 17734921 - 2R_17734916_17734921_- 0.548287107 0.994163059 0.771225083 0.315281943 CG6406 FBtr0086883|FBtr0086884 17734417|17734417 17735315|17735315 2R - 17734768 17734933 3'utr CG6406 FlyBase G24468.1 TCGCCACCTACCGCTGTGTATTAGCCGAATAGAACCGTGGCTCGAAATTTGAATTTATGGCATAAGCATCGTTTGAGTTTGTTGACTTTGATGGGTTTTCTTAGTTGTTCGTATGTATTATCGTATTCCAAATCCAATTGTTGGTTAGATTAAGTGTTGCTAGGAC 19 17734913 0.984658693 13 19 168 1 1.278753601 0.315789474 0 0 19 0 0 19 2R:17734768-17734933 6 CG6406 FBtr0086883|FBtr0086884 17734417|17734417 17735315|17735315 GCTGTG 6mer2-7 dme-miR-1008-3p 2R - 17734880 17734943 3'utr CG6406 FlyBase G18511.1 ATGTGTACATTCGCCACCTACCGCTGTGTATTAGCCGAATAGAACCGTGGCTCGAAATTTGAAT 10 17734925 0.746540287 8 9 59 0.866666667 0.636822098 0.2 0.4 0.6 10 0 2 13 2R:17734880-17734943 6 6.5 756 FBgn0034269 376.6666667 16.84333333 25.91666667 0.017256637 0.385909361 0.250803859 -8 4 -2 0.25 dme-miR-304-5p 8mer-A1 TGAGATTA 2R 17841112 17841119 + 2R_17841112_17841119_+ 0.581263701 0.531195739 0.55622972 0.035403422 grh FBtr0300539|FBtr0306625|FBtr0300541|FBtr0299705|FBtr0299707|FBtr0345791|FBtr0299706 17840873|17840873|17840873|17840873|17840873|17840873|17840873 17842820|17841528|17841528|17841613|17841613|17841613|17841613 2R + 17841090 17841127 5'utr grh FlyBase G17014.1 GATTTAGTTATTTTAGCAACAATGAGATTATCTAAAAT 17 17841112 0.952336697 3 16 133 1 1.230448921 0 0 0 17 0 0 17 2R:17841090-17841127 8 grh FBtr0299706|FBtr0299707|FBtr0345791|FBtr0300541|FBtr0299705|FBtr0300539|FBtr0306625 17840873|17840873|17840873|17840873|17840873|17840873|17840873 17841613|17841613|17841613|17841528|17841613|17842820|17841528 TGAGATTA 8mer-A1 dme-miR-304-5p 2R + 17841095 17841144 5'utr grh FlyBase G12955.1 AGTTATTTTAGCAACAATGAGATTATCTAAAATTGTTTGATCAAATTTTA 13 17841112 0.979994809 2 12 91 1 1.278753601 0.105263158 0.384615385 0.578947368 13 0 0 19 2R:17841095-17841144 8 13.5 757 FBgn0259211 11.04666667 0.27 0.426666667 1.222088111 50 31.640625 0 0 0 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 17859909 17859915 + 2R_17859909_17859915_+ 0.714791144 0.710822901 0.712807023 0.002805941 olf186-F FBtr0086795|FBtr0086795|FBtr0086795|FBtr0086797|FBtr0086797|FBtr0086797|FBtr0336699|FBtr0336699|FBtr0336699|FBtr0114614|FBtr0114614|FBtr0114614|FBtr0336698|FBtr0336698|FBtr0336698 17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793 17860582|17860582|17860582|17860582|17860582|17860582|17860582|17860582|17860582|17860284|17860284|17860284|17860582|17860582|17860582 2R + 17859883 17859939 3'utr olf186-F FlyBase G17044.1 ATTGTAAATTTGTAGTTGATTAAAATTGTGATACGCGGAATTCAGTAGATTTCTACT 413 17859908 0.719855606 17 384 3002 0.940357853 1.352641846 0.355864811 0.181598063 0.328031809 413 10 20 473 2R:17859883-17859939 7 olf186-F FBtr0336698|FBtr0336698|FBtr0336698|FBtr0114614|FBtr0114614|FBtr0114614|FBtr0336699|FBtr0336699|FBtr0336699|FBtr0086797|FBtr0086797|FBtr0086797|FBtr0086795|FBtr0086795|FBtr0086795 17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793|17859793 17860582|17860582|17860582|17860284|17860284|17860284|17860582|17860582|17860582|17860582|17860582|17860582|17860582|17860582|17860582 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 17859885 17859940 3'utr olf186-F FlyBase G12974.2 TGTAAATTTGTAGTTGATTAAAATTGTGATACGCGGAATTCAGTAGATTTCTACTA 288 17859908 0.72611939 12 258 2037 0.90521327 1.303309762 0.362559242 0.374125874 0.575829384 286 22 18 382 2R:17859885-17859940 7 338 758 FBgn0041585 1045.89 35.90333333 55.08666667 0.323169741 9.414167672 6.135786034 1 1 1 0.25 dme-miR-283-5p 6mer3-8 TGATAT 2R 17860314 17860319 + 2R_17860314_17860319_+ 0.998481143 0.975902955 0.987192049 0.015965128 olf186-F FBtr0086795|FBtr0086797|FBtr0336699|FBtr0336698 17859793|17859793|17859793|17859793 17860582|17860582|17860582|17860582 2R + 17860289 17860329 3'utr olf186-F FlyBase G17046.1 GGTGTTGGAGTTTTATTTTTAATCGTGATATATAGCTGAAC 8 17860310 0.981825556 5 8 83 1 0.954242509 0.222222222 0.125 0.222222222 8 0 0 9 2R:17860289-17860329 6 olf186-F FBtr0336698|FBtr0336699|FBtr0086797|FBtr0086795 17859793|17859793|17859793|17859793 17860582|17860582|17860582|17860582 TGATAT 6mer3-8 dme-miR-283-5p 2R + 17860300 17860329 3'utr olf186-F FlyBase G12977.1 TTTATTTTTAATCGTGATATATAGCTGAAC 13 17860307 0.57907223 5 13 125 1 1.230448921 0.411764706 0.230769231 0.411764706 13 0 0 17 2R:17860300-17860329 6 10.5 759 FBgn0041585 1045.89 35.90333333 55.08666667 0.010039297 0.292451954 0.190608738 4 7 5.5 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2R 18100562 18100567 + 2R_18100562_18100567_+ 0.753549827 0.896270661 0.824910244 0.100918916 CG5098 FBtr0329994|FBtr0346952|FBtr0113092|FBtr0086732 18100252|18100207|18100207|18100207 18101031|18101031|18101031|18101031 2R + 18100531 18100626 3'utr CG5098 FlyBase G17062.1 ATTTTTTCGCATAGTCCAGAACTTTACATTAGTACCTTTTAGTTCTAACTAATTTTAAAACCACCAGCCCATGTCCTATGCCCACCCATCTGCATC 76 18100569 0.864456841 14 75 707 0.989010989 1.954242509 0.142857143 0.157894737 0.296703297 76 1 0 90 2R:18100531-18100626 6 CG5098 FBtr0113092|FBtr0086732|FBtr0329994|FBtr0346952 18100207|18100207|18100252|18100207 18101031|18101031|18101031|18101031 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2R + 18100504 18100620 3'utr CG5098 FlyBase G12992.1 GTTTATGTTTAAGATACGTCCTAAATTATTTTTTCGCATAGTCCAGAACTTTACATTAGTACCTTTTAGTTCTAACTAATTTTAAAACCACCAGCCCATGTCCTATGCCCACCCATC 62 18100569 0.989677844 12 60 590 0.957446809 1.954242509 0.117021277 0.322580645 0.553191489 62 4 0 90 2R:18100504-18100620 6 52.5 760 FBgn0034300 227 5.456666667 8.356666667 0.231277533 9.6212584 6.282409254 -7 -7 -7 0.25 dme-miR-8-3p 8mer-A1 CAGTATTA 2R 18118379 18118386 - 2R_18118379_18118386_- 0.64907263 0.635734497 0.642403563 0.009431461 stau FBtr0086783|FBtr0086784 18117894|18117894 18119780|18119780 2R - 18118351 18118425 3'utr stau FlyBase G24567.2 AGCCCCAGCGAACTGTAACCGTTGAAATGAAGTCAATCCCAGTATTAAATGTATAGATAGGGGGCAGTTGTGCGT 19 18118389 0.974347486 7 15 114 0.875 1.322219295 0.125 0.263157895 0.416666667 19 3 0 21 2R:18118351-18118425 8 stau FBtr0086784|FBtr0086783 18117894|18117894 18119780|18119780 CAGTATTA 8mer-A1 dme-miR-8-3p 2R - 18118359 18118426 3'utr stau FlyBase G18586.1 AAGCCCCAGCGAACTGTAACCGTTGAAATGAAGTCAATCCCAGTATTAAATGTATAGATAGGGGGCAG 9 18118389 0.968322356 6 8 43 1 1.322219295 0.142857143 0.666666667 0.857142857 9 0 0 21 2R:18118359-18118426 8 9 761 FBgn0003520 789.19 18.35 28.11 0.011404098 0.490463215 0.320170758 3 3 3 0.25 dme-miR-932-5p 7mer-A1 GAATTGA 2R 18119471 18119477 - 2R_18119471_18119477_- 0.745196077 0.823319974 0.784258026 0.055241939 stau FBtr0086783|FBtr0086784 18117894|18117894 18119780|18119780 2R - 18119419 18119480 3'utr stau FlyBase G24574.1 TGAGAATTGAATAACGAATCGAACTGATAGTAACCGAAACTGAACAGAGGCGAACACTTAAC 14 18119453 0.939947215 5 14 54 1 1.255272505 0.166666667 0.285714286 0.444444444 14 0 0 18 2R:18119419-18119480 7 stau FBtr0086784|FBtr0086783 18117894|18117894 18119780|18119780 GAATTGA 7mer-A1 dme-miR-932-5p 2R - 18119421 18119479 3'utr stau FlyBase G18591.1 GAGAATTGAATAACGAATCGAACTGATAGTAACCGAAACTGAACAGAGGCGAACACTTA 17 18119452 0.955733922 7 15 67 0.913043478 1.322219295 0.47826087 0.294117647 0.47826087 17 2 0 21 2R:18119421-18119479 7 8.5 762 FBgn0003520 789.19 18.35 28.11 0.010770537 0.463215259 0.302383493 -24 -25 -24.5 0.25 dme-miR-92b-3p 7mer-m1 TGCAATT 2R 18119736 18119742 - 2R_18119736_18119742_- 0.751986373 0.764554415 0.758270394 0.008886918 stau FBtr0086783|FBtr0086784 18117894|18117894 18119780|18119780 2R - 18119710 18119794 stop_codon stau FlyBase G24578.1 ATGCCATGAAATAAGCATAAAGCGCTGAAAATTTCACAAAACCCTTATTAACTGCAATTTTTGTTGTTGCACATAAGCATGATAA 28 18119744 0.989184775 12 23 213 0.833333333 1.176091259 0.027777778 0.214285714 0.388888889 28 5 1 30 2R:18119710-18119794 7 stau FBtr0086784|FBtr0301614|FBtr0086783 18117894|18119622|18117894 18119780|18119780|18119780 TGCAATT 7mer-m1 dme-miR-92b-3p 2R - 18119711 18119775 3'utr stau FlyBase G18594.1 AAGCGCTGAAAATTTCACAAAACCCTTATTAACTGCAATTTTTGTTGTTGCACATAAGCATGATA 23 18119741 0.993817712 7 15 187 0.675 1.431363764 0.075 0.434782609 0.675 23 13 0 27 2R:18119711-18119775 7 19 763 FBgn0003520 789.19 18.35 28.11 0.024075318 1.035422343 0.675916044 2 -1 0.5 0.25 dme-miR-980-5p 6mer3-8 GAAAAA 2R 18139387 18139392 + 2R_18139387_18139392_+ 0.980404204 0.819671351 0.900037777 0.113655253 Pcl FBtr0086735|FBtr0329998 18139235|18139235 18139442|18139990 2R + 18139345 18139432 3'utr Pcl FlyBase G17085.1 TGTTAATGTTTAAAAGTTTATTACCAACCCACTGCCAAAATAGAAAAAGATTGTTCAAAATATTGGTTCAGCATTAAAGCGATAAAAT 19 18139395 0.961262431 6 19 98 1 1.342422681 0.136363636 0.157894737 0.272727273 19 0 0 22 2R:18139345-18139432 6 Pcl FBtr0086735|FBtr0329998 18139235|18139235 18139442|18139990 GAAAAA 6mer3-8 dme-miR-980-5p 2R + 18139357 18139428 3'utr Pcl FlyBase G13008.1 AAAGTTTATTACCAACCCACTGCCAAAATAGAAAAAGATTGTTCAAAATATTGGTTCAGCATTAAAGCGATA 13 18139395 0.800346722 7 13 70 1 1.176091259 0.066666667 0.153846154 0.266666667 13 0 0 15 2R:18139357-18139428 6 11.5 764 FBgn0003044 1047.913333 31.18 47.85 0.01097419 0.368826171 0.240334378 -8 -8 -8 0.25 dme-miR-988-3p 7mer-A1 CAAGGGA 2R 18146837 18146843 + 2R_18146837_18146843_+ 0.602954944 0.754606033 0.678780489 0.107233521 pAbp FBtr0086740 18145219 18147191 2R + 18146675 18146952 3'utr pAbp FlyBase G17106.1 AAACAAATAAAAACCCAAGGAAAAATCATTGAAAAAATTGCAAAACACAAAACCACATGTATGCAGAAAATGCAAAATTATTTAAAAAAAACAAACAAACAAAATAATGAGAGTAAAACAGAAAAAAAAAACATAACCAAAACCCGAATTGGAATGTTAGTTCAAGGGAAATTGCGAAGAAGAAAACTTTTACTTTTCACGAAATATACGCAAGTCAACACACTTCTATATATAGCAGATATATATATGTATCCTTATATATTAAAGCGAAATAAAAC 86 18146835 0.972309948 27 79 454 0.93814433 1.356981401 0.092783505 0.127906977 0.226804124 86 3 3 91 2R:18146675-18146952 7 pAbp FBtr0086740 18145219 18147191 CAAGGGA 7mer-A1 dme-miR-988-3p 2R + 18146661 18146858 3'utr pAbp FlyBase G13033.1 AAATCGAAAACTAAAAACAAATAAAAACCCAAGGAAAAATCATTGAAAAAATTGCAAAACACAAAACCACATGTATGCAGAAAATGCAAAATTATTTAAAAAAAACAAACAAACAAAATAATGAGAGTAAAACAGAAAAAAAAAACATAACCAAAACCCGAATTGGAATGTTAGTTCAAGGGAAATTGCGAAGAAGAA 40 18146834 0.952382821 16 37 162 0.940298507 1.498310554 0.23880597 0.5 0.701492537 40 3 1 63 2R:18146661-18146858 7 21 765 FBgn0265297 43597.22333 1372.25 2113.58 0.000481682 0.015303334 0.009935749 2 3 2.5 0.25 dme-miR-1003-3p 7mer-m8 ATGTGAG 2R 18154173 18154179 - 2R_18154173_18154179_- 0.67179196 0.671796153 0.671794057 2.97E-06 lolal FBtr0086777 18154093 18155147 2R - 18154141 18154197 3'utr lolal FlyBase G24616.1 ATGTATGTATATGTATACATGTGAGCATAGATTTAAAGAAACTACGGTAAATAAACA 27 18154170 0.988774769 7 22 204 0.766666667 1.06069784 0.133333333 0.074074074 0.166666667 27 6 1 23 2R:18154141-18154197 7 lolal FBtr0086777 18154093 18155147 ATGTGAG 7mer-m8 dme-miR-1003-3p 2R - 18154134 18154197 3'utr lolal FlyBase G18621.1 ATGTATGTATATGTATACATGTGAGCATAGATTTAAAGAAACTACGGTAAATAAACAGAATAAT 21 18154182 0.987268663 8 17 145 0.810810811 1.477121255 0.162162162 0.476190476 0.702702703 21 7 0 30 2R:18154134-18154197 7 23.5 766 FBgn0022238 614.5133333 54.55666667 83.64333333 0.038241644 0.430744791 0.280954848 -9 3 -3 0.25 dme-miR-305-5p 6mer2-7 GTACAA 2R 18164138 18164143 + 2R_18164138_18164143_+ 0.778968974 0.801386975 0.790177974 0.01585192 CG10915 FBtr0345416|FBtr0086746 18163524|18163524 18164746|18164209 2R + 18164083 18164191 3'utr CG10915 FlyBase G17122.1 AAGCCAAGAGACAAGCGACTTTAAATGTAATTCCGTACGTAGTAACCGAACATTTGTACAAGGCCGTGCGATTCTCATAACAAGTAACAGCCACAATATATGATAATTA 93 18164136 0.955038233 13 88 400 0.957264957 1.572096768 0.299145299 0.225806452 0.384615385 93 3 2 112 2R:18164083-18164191 6 CG10915 FBtr0086746|FBtr0345416 18163524|18163524 18164209|18164746 GTACAA 6mer2-7 dme-miR-305-5p 2R + 18164083 18164175 3'utr CG10915 FlyBase G13044.1 AAGCCAAGAGACAAGCGACTTTAAATGTAATTCCGTACGTAGTAACCGAACATTTGTACAAGGCCGTGCGATTCTCATAACAAGTAACAGCCA 81 18164136 0.955813876 12 79 367 0.982142857 2.041392685 0.303571429 0.283950617 0.482142857 81 2 0 110 2R:18164083-18164175 6 58 767 FBgn0034308 795.0233333 28.65333333 43.94333333 0.072953834 2.024197301 1.319881666 2 2 2 0.25 dme-miR-980-3p 7mer-A1 GCAGCTA 2R 18164340 18164346 + 2R_18164340_18164346_+ 0.812215088 0.81004342 0.811129254 0.001535624 CG10915 FBtr0345416 18163524 18164746 2R + 18164292 18164421 3'utr CG10915 FlyBase G17123.2 ATAGTTCTTAGGTGCGTCGCATACGTGTGTAATCAACTTCCTCCATGTGCAGCTAACATACTGAATTATTTCGTAGTGTTTGATTTATATATTAAGTTCTAAGTTCGGCCTAAGCACCTTTGTTTGCCCG 136 18164337 0.981511724 18 129 890 0.958333333 1.90579588 0.035714286 0.183823529 0.339285714 136 6 1 161 2R:18164292-18164421 7 CG10915 FBtr0345416 18163524 18164746 GCAGCTA 7mer-A1 dme-miR-980-3p 2R + 18164289 18164389 3'utr CG10915 FlyBase G13045.2 TTAATAGTTCTTAGGTGCGTCGCATACGTGTGTAATCAACTTCCTCCATGTGCAGCTAACATACTGAATTATTTCGTAGTGTTTGATTTATATATTAAGTT 81 18164337 0.796114938 13 79 504 1 2.096910013 0.04 0.419753086 0.624 81 0 0 125 2R:18164289-18164389 7 91.5 768 FBgn0034308 795.0233333 28.65333333 43.94333333 0.115090962 3.193345742 2.082227111 3 3 3 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 18164534 18164539 + 2R_18164534_18164539_+ 0.90397577 0.890693843 0.897334807 0.009391792 CG10915 FBtr0345416|FBtr0345416|FBtr0345416 18163524|18163524|18163524 18164746|18164746|18164746 2R + 18164518 18164626 3'utr CG10915 FlyBase G17124.1 ATTTTACAAATGCGTACTGTGAACATCCCTCCAGCCCCCCAGCAGCTTGGATTACCTTTTTAGTCAAAGGGCAGCAGCCAGTCAAGTAGTGTTGTTGGTACAATAAATA 48 18164543 0.764014351 14 43 293 0.877192982 1.096910013 0.333333333 0.125 0.263157895 48 4 3 50 2R:18164518-18164626 6 CG10915 FBtr0345416|FBtr0345416|FBtr0345416 18163524|18163524|18163524 18164746|18164746|18164746 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 18164518 18164619 3'utr CG10915 FlyBase G13047.1 ATTTTACAAATGCGTACTGTGAACATCCCTCCAGCCCCCCAGCAGCTTGGATTACCTTTTTAGTCAAAGGGCAGCAGCCAGTCAAGTAGTGTTGTTGGTACA 29 18164536 0.686504114 12 26 154 0.87755102 1.633468456 0.204081633 0.413793103 0.653061224 29 6 0 43 2R:18164518-18164619 6 14.5 769 FBgn0034308 795.0233333 28.65333333 43.94333333 0.018238458 0.506049325 0.329970416 -9 -2 -5.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2R 18168991 18168996 - 2R_18168991_18168996_- 0.991641622 0.966991502 0.979316562 0.017430253 Dgp-1 FBtr0086773|FBtr0086774 18168741|18168411 18169024|18169024 2R - 18168966 18169077 stop_codon Dgp-1 FlyBase G24640.1 ATCCTTCGTCGTCGTCCTCGGTTGAAGTCACACCGGCCGCTCTCACCGAGTGAAGTGCGCCGCCTGCATGTTTTGGCTCTTTCTAGTTTTGTAAACTAAAGTATTTTTTTTT 29 18168997 0.900177205 17 27 278 0.911764706 1.491361694 0.147058824 0.103448276 0.235294118 29 3 0 31 2R:18168966-18169077 6 Dgp-1 FBtr0086774|FBtr0086773 18168411|18168741 18169024|18169024 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2R - 18168973 18169107 stop_codon Dgp-1 FlyBase G18637.1 CGGCCTCTTTGGGTCTGCCCCTCGGCGAGAATCCTTCGTCGTCGTCCTCGGTTGAAGTCACACCGGCCGCTCTCACCGAGTGAAGTGCGCCGCCTGCATGTTTTGGCTCTTTCTAGTTTTGTAAACTAAAGTATT 32 18168997 0.949764327 12 32 262 1 1.707570176 0.117647059 0.5 0.68627451 32 0 0 51 2R:18168973-18169107 6 15.5 770 FBgn0027836 713.1466667 32.87333333 49.73 0.02173466 0.471506794 0.311683089 1 1 1 0.25 dme-miR-1003-3p 6mer2-7 TGTGAG 2R 18175472 18175477 - 2R_18175472_18175477_- 0.946972452 0.932553113 0.939762783 0.010196056 CG5726 FBtr0086772 18175253 18176079 2R - 18175426 18175498 3'utr CG5726 FlyBase G24656.1 ACGTATTTTTAAAGCAAATTTTGTGAGGCCCTCTGTTGGAACAACAAAGCCAAGCCGGAGTGCAGAGAAAAAC 66 18175478 0.973020183 7 62 449 0.931506849 1.355387658 0.054794521 0.106060606 0.191780822 66 3 2 68 2R:18175426-18175498 6 CG5726 FBtr0086772 18175253 18176079 TGTGAG 6mer2-7 dme-miR-1003-3p 2R - 18175454 18175498 3'utr CG5726 FlyBase G18656.1 ACGTATTTTTAAAGCAAATTTTGTGAGGCCCTCTGTTGGAACAAC 34 18175478 0.680497868 5 32 255 0.9375 1.352182518 0 0.323529412 0.520833333 34 2 1 45 2R:18175454-18175498 6 48 771 FBgn0034313 580.9266667 20.17 30.98666667 0.082626608 2.379771939 1.549053356 1 1 1 0.25 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 18175678 18175685 - 2R_18175678_18175685_- 0.586376292 0.605427229 0.595901761 0.013471021 CG5726 FBtr0086772 18175253 18176079 2R - 18175666 18175697 3'utr CG5726 FlyBase G24658.1 GCTTAGAAACTAAGTACAAAGTCAATGAAAAA 5 18175672 0.866793604 4 5 18 1 0.903089987 0.375 0.6 0.75 5 0 0 8 2R:18175666-18175697 8 CG5726 FBtr0086772 18175253 18176079 AGTACAAA 8mer-A1 dme-miR-305-5p 2R - 18175658 18175701 3'utr CG5726 FlyBase G18657.1 AATTGCTTAGAAACTAAGTACAAAGTCAATGAAAAAACAAAAAT 6 18175696 0.977280583 4 5 25 0.857142857 0.77815125 0 0.166666667 0.285714286 6 1 0 6 2R:18175658-18175701 8 5 772 FBgn0034313 580.9266667 20.17 30.98666667 0.008606938 0.24789291 0.161359725 -13 11 -1 0.25 dme-miR-14-3p 6mer2-7 AGACTG 2R 18175961 18175966 - 2R_18175961_18175966_- 0.542919243 0.585458984 0.564189113 0.030080181 CG5726 FBtr0086772 18175253 18176079 2R - 18175923 18176012 3'utr CG5726 FlyBase G24660.1 TGTTTCGCCTTCGTATATGTTTCCTAATGGATGTGTATATCCACGTAGACTGTTTTCACATTATTTTGTCTTCAACTGAGCTCAAATGTT 39 18175960 0.799523655 10 36 349 0.957446809 1.352182518 0.255319149 0.179487179 0.319148936 39 1 1 45 2R:18175923-18176012 6 CG5726 FBtr0086772 18175253 18176079 AGACTG 6mer2-7 dme-miR-14-3p 2R - 18175923 18175978 3'utr CG5726 FlyBase G18658.1 GTATATCCACGTAGACTGTTTTCACATTATTTTGTCTTCAACTGAGCTCAAATGTT 16 18175960 0.9852749 5 14 123 0.913043478 1.021189299 0.347826087 0.25 0.47826087 16 1 1 21 2R:18175923-18175978 6 16.5 773 FBgn0034313 580.9266667 20.17 30.98666667 0.028402897 0.818046604 0.532487091 -6 -6 -6 0.25 dme-miR-92b-3p 7mer-m1 TGCAATT 2R 18278583 18278589 - 2R_18278583_18278589_- 0.648093898 0.711427652 0.679760775 0.044783759 sbb FBtr0301550 18278196 18280102 2R - 18278576 18278609 3'utr sbb FlyBase G24684.1 AGGTTTTTTGACATTCTTAATGCAATTTGTAATC 14 18278593 0.757025235 3 14 139 1 1.204119983 0 0.142857143 0.25 14 0 0 16 2R:18278576-18278609 7 sbb FBtr0301550 18278196 18280102 TGCAATT 7mer-m1 dme-miR-92b-3p 2R - 18278576 18278619 3'utr sbb FlyBase G18674.1 AGGAGTCGCTAGGTTTTTTGACATTCTTAATGCAATTTGTAATC 13 18278593 0.987181019 5 12 115 1 1.342422681 0.090909091 0.538461538 0.727272727 13 0 0 22 2R:18278576-18278619 7 13 774 FBgn0010575 986.7266667 17.07666667 26.24333333 0.013174875 0.761272692 0.495363902 4 4 4 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 2R 18279374 18279379 - 2R_18279374_18279379_- 0.989370131 0.999237364 0.994303748 0.006977235 sbb FBtr0301550|FBtr0329997|FBtr0301551|FBtr0301547 18278196|18279063|18279063|18278978 18280102|18280048|18280102|18280102 2R - 18279350 18279458 3'utr sbb FlyBase G24688.2 ATTGTTTAACTAAATGATTAAATTATGCAAGTAGAACGTACAAGATTAGCATTTAGCGTGTGTATTAATTATCCTTATCTGTGTTGCGGATGGAGCTGCGCGGGATTTG 233 18279381 0.984492968 21 165 1912 0.701886792 1.667452953 0.230188679 0.124463519 0.230188679 233 76 3 186 2R:18279350-18279458 6 sbb FBtr0301551|FBtr0301547|FBtr0301550|FBtr0329997 18279063|18278978|18278196|18279063 18280102|18280102|18280102|18280048 TGTGTT 6mer3-8 dme-miR-317-3p 2R - 18279301 18279393 3'utr sbb FlyBase G18678.1 TAATTATCCTTATCTGTGTTGCGGATGGAGCTGCGCGGGATTTGCATCTAAAAGACAAATTGGGCGCGCCGCCCATTCAATTCTTATAAATAT 220 18279381 0.885389879 16 135 1533 0.630813953 1.222516382 0.296511628 0.404545455 0.619186047 220 115 12 217 2R:18279301-18279393 6 211.5 775 FBgn0010575 986.7266667 17.07666667 26.24333333 0.214345074 12.3853211 8.059189635 2 2 2 0.25 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 18409811 18409817 - 2R_18409811_18409817_- 0.823006166 0.800455942 0.811731054 0.01594547 imd FBtr0086725|FBtr0345891 18409794|18409794 18410171|18410171 2R - 18409801 18409830 3'utr imd FlyBase G24719.1 TTATACAAATAGAAGCTTTATTGTTACGTA 5 18409821 0.854286714 2 5 41 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2R:18409801-18409830 7 imd FBtr0086725|FBtr0345891 18409794|18409794 18410171|18410171 AGCTTTA 7mer-A1 dme-miR-79-3p 2R - 18409804 18409861 3'utr imd FlyBase G18701.1 GAGCTGGTATTTAAAAGCATTTTTGTAAAGTTTATACAAATAGAAGCTTTATTGTTAC 9 18409813 0.98230543 6 8 67 1 1.176091259 0.6 0.333333333 0.6 9 0 0 15 2R:18409804-18409861 7 6 776 FBgn0013983 396 36.13 55.28 0.015151515 0.16606698 0.10853835 4 -4 0 0.25 dme-miR-92b-3p 8mer-A1 GTGCAATA 2R 18409976 18409983 - 2R_18409976_18409983_- 0.367959286 0.488211055 0.428085171 0.085030863 imd FBtr0086725|FBtr0345891 18409794|18409794 18410171|18410171 2R - 18409884 18409994 3'utr imd FlyBase G24720.1 ACGGGATATATGTGCAATATTTGATTTATAAATCCAACCTATCGAATAAGTGCGTAGAATTGCATTAACTGTTATTACTGCAGTTTAATCTTTAAGTTGTGATACTTGTGT 27 18409984 0.772176735 13 24 239 0.914285714 1.505149978 0.457142857 0.148148148 0.342857143 27 3 0 32 2R:18409884-18409994 8 imd FBtr0086725|FBtr0345891 18409794|18409794 18410171|18410171 GTGCAATA 8mer-A1 dme-miR-92b-3p 2R - 18409885 18409993 3'utr imd FlyBase G18702.1 CGGGATATATGTGCAATATTTGATTTATAAATCCAACCTATCGAATAAGTGCGTAGAATTGCATTAACTGTTATTACTGCAGTTTAATCTTTAAGTTGTGATACTTGTG 33 18409984 0.793735591 12 26 274 0.790697674 0.929418926 0.23255814 0.272727273 0.441860465 33 6 3 34 2R:18409885-18409993 8 9 777 FBgn0013983 396 36.13 55.28 0.022727273 0.249100471 0.162807525 1 1 1 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 18419784 18419791 + 2R_18419784_18419791_+ 0.519477903 0.521893742 0.520685822 0.001708229 Dp1 FBtr0345226|FBtr0086682|FBtr0086679|FBtr0086680|FBtr0086681|FBtr0086683|FBtr0340329 18419424|18419424|18419424|18419424|18419424|18419424|18419424 18420742|18420742|18420742|18420742|18420742|18421124|18420742 2R + 18419761 18419817 3'utr Dp1 FlyBase G17185.1 ACACATGCTCACACATATGAAATTGCATTTATACAACATATAGAATACGAGAATCGA 84 18419783 0.807586703 7 77 648 0.914893617 1.33243846 0.031914894 0.107142857 0.20212766 84 5 3 86 2R:18419761-18419817 8 Dp1 FBtr0086683|FBtr0340329|FBtr0086680|FBtr0086681|FBtr0086682|FBtr0086679|FBtr0345226 18419424|18419424|18419424|18419424|18419424|18419424|18419424 18421124|18420742|18420742|18420742|18420742|18420742|18420742 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 18419762 18419805 3'utr Dp1 FlyBase G13102.1 CACATGCTCACACATATGAAATTGCATTTATACAACATATAGAA 41 18419783 0.964412269 4 39 282 0.938461538 1.785329835 0.123076923 0.390243902 0.615384615 41 4 0 61 2R:18419762-18419805 8 60.5 778 FBgn0027835 9328.583333 204.7766667 314.1966667 0.006485443 0.295443817 0.192554557 1 1 1 0.25 dme-miR-1012-3p 6mer2-7 TGACTA 2R 18420019 18420024 + 2R_18420019_18420024_+ 0.998212924 0.999994252 0.999103588 0.00125964 Dp1 FBtr0345226|FBtr0086682|FBtr0086679|FBtr0086680|FBtr0086681|FBtr0086683|FBtr0340329 18419424|18419424|18419424|18419424|18419424|18419424|18419424 18420742|18420742|18420742|18420742|18420742|18421124|18420742 2R + 18419965 18420037 3'utr Dp1 FlyBase G17186.1 TCCCTAAAAGTAAGCAGAAAGTTCAGCAAAATGGTTTGTTAATTGAATTAAAACTGACTAGCGAAGCACGTTC 14 18420011 0.970726222 6 11 63 0.8125 1.113943352 0.5 0.142857143 0.25 14 3 0 13 2R:18419965-18420037 6 Dp1 FBtr0086683|FBtr0340329|FBtr0086680|FBtr0086681|FBtr0086682|FBtr0086679|FBtr0345226 18419424|18419424|18419424|18419424|18419424|18419424|18419424 18421124|18420742|18420742|18420742|18420742|18420742|18420742 TGACTA 6mer2-7 dme-miR-1012-3p 2R + 18419977 18420060 3'utr Dp1 FlyBase G13104.1 AGCAGAAAGTTCAGCAAAATGGTTTGTTAATTGAATTAAAACTGACTAGCGAAGCACGTTCAAGAACGAATGTAATTTTAAGCA 21 18420012 0.841890371 8 15 119 0.807692308 1.021189299 0.269230769 0.19047619 0.346153846 21 4 1 21 2R:18419977-18420060 6 10.5 779 FBgn0027835 9328.583333 204.7766667 314.1966667 0.001125573 0.051275373 0.03341856 8 7 7.5 0.25 dme-miR-1008-3p 7mer-A1 GCTGTGA 2R 18444911 18444917 + 2R_18444911_18444917_+ 0.319912038 0.43412764 0.377019839 0.080762625 slim FBtr0086693|FBtr0331958 18444783|18444783 18445526|18444955 2R + 18444890 18444938 3'utr slim FlyBase G17217.1 TTTGTTTCACATTGAGCGCGCGCTGTGATCGAACATGAAGATAATATAT 25 18444901 0.781314106 6 19 132 0.677419355 0.720159303 0.064516129 0.2 0.35483871 25 7 3 21 2R:18444890-18444938 7 slim FBtr0086693|FBtr0331958 18444783|18444783 18445526|18444955 GCTGTGA 7mer-A1 dme-miR-1008-3p 2R + 18444896 18444936 3'utr slim FlyBase G13129.1 TCACATTGAGCGCGCGCTGTGATCGAACATGAAGATAATAT 15 18444901 0.847226317 5 14 70 0.857142857 1.380211242 0.107142857 0.4 0.678571429 15 4 0 24 2R:18444896-18444936 7 20 780 FBgn0261477 905.8466667 35.99333333 55.57333333 0.022078792 0.555658455 0.359884837 10 10 10 0.25 dme-miR-1007-3p 7mer-A1 GAGCTTA 2R 18554169 18554175 - 2R_18554169_18554175_- 0.82251962 0.433910778 0.628215199 0.274787918 GEFmeso FBtr0310055|FBtr0340387|FBtr0300421 18554117|18554117|18554117 18556919|18554332|18554332 2R - 18554151 18554210 3'utr GEFmeso FlyBase G24746.1 ATCTTAGATAGTATTAGTCGACTGTTTTATATTTAGAGCTTAGTTGCATAACCGCAGAGT 7 18554186 0.992829544 5 7 83 1 0.84509804 0.142857143 0 0 7 0 0 7 2R:18554151-18554210 7 GEFmeso FBtr0300421|FBtr0340387|FBtr0310055 18554117|18554117|18554117 18554332|18554332|18556919 GAGCTTA 7mer-A1 dme-miR-1007-3p 2R - 18554173 18554212 3'utr GEFmeso FlyBase G18719.1 TAATCTTAGATAGTATTAGTCGACTGTTTTATATTTAGAG 7 18554199 0.897308631 5 7 72 1 1.041392685 0.181818182 0.571428571 0.727272727 7 0 0 11 2R:18554173-18554212 2 3.5 781 FBgn0050115 776.3133333 15.20333333 23.32 0.004508489 0.230212673 0.150085763 11 24 17.5 0.25 dme-miR-965-3p 7mer-m8 TACGCTT 2R 18658958 18658964 - 2R_18658958_18658964_- 0.616485499 0.617514865 0.617000182 0.000727896 CG42306 FBtr0299689|FBtr0299688|FBtr0340393 18658416|18658416|18658416 18660044|18660044|18660044 2R - 18658921 18659000 5'utr CG42306 FlyBase G24810.1 GAACGCGAGGAGCAGCGCAATTTGCGCATGTATCGATACGCTTTAGTCAGGGTTAAATTTCCCAATGGACTCTTTATACA 88 18658964 0.985590529 12 82 683 0.951923077 1.393575203 0.240384615 0.159090909 0.288461538 88 2 3 99 2R:18658921-18659000 7 CG42306 FBtr0340393|FBtr0299688|FBtr0299689 18658416|18658416|18658416 18660044|18660044|18660044 TACGCTT 7mer-m8 dme-miR-965-3p 2R - 18658922 18658998 5'utr CG42306 FlyBase G18765.1 ACGCGAGGAGCAGCGCAATTTGCGCATGTATCGATACGCTTTAGTCAGGGTTAAATTTCCCAATGGACTCTTTATAC 52 18658964 0.983447231 7 51 398 1 1.875061263 0.306666667 0.288461538 0.506666667 52 0 0 75 2R:18658922-18658998 7 56 782 FBgn0259202 627.1666667 39.15666667 59.96 0.08929046 1.430152379 0.933955971 0 0 0 0.25 dme-miR-33-5p 6mer3-8 CAATGC 2R 18667587 18667592 - 2R_18667587_18667592_- 0.875864415 0.888899898 0.882382156 0.00921749 edl FBtr0086652 18667525 18667828 2R - 18667541 18667664 3'utr edl FlyBase G24818.1 AGATTGCTTCAAGTTTTCAATTCATTTTGAAAGAAAAGTGATTGGAGTGAATAGAATAAAAGATTGAAGTTACAATGCTGTCCTATTAGTTAACTAAGTTCGCATATGATGAAAATATAAAATG 1064 18667589 0.878959278 27 1022 10526 0.958064516 2.171726454 0.253225806 0.142857143 0.264516129 1064 45 7 1188 2R:18667541-18667664 6 edl FBtr0086652 18667525 18667828 CAATGC 6mer3-8 dme-miR-33-5p 2R - 18667527 18667654 3'utr edl FlyBase G18770.1 AAGTTTTCAATTCATTTTGAAAGAAAAGTGATTGGAGTGAATAGAATAAAAGATTGAAGTTACAATGCTGTCCTATTAGTTAACTAAGTTCGCATATGATGAAAATATAAAATGAAATTTTATAACTG 653 18667589 0.989705681 25 614 6020 0.94438723 2.184218085 0.270854789 0.370597243 0.576725026 653 49 5 917 2R:18667527-18667654 6 693.5 783 FBgn0023214 335.02 28.75666667 44.53 2.07002567 24.11614698 15.57377049 -3 -3 -3 0.25 dme-miR-8-3p 7mer-A1 AGTATTA 2R 18667696 18667702 - 2R_18667696_18667702_- 0.816559084 0.795106545 0.805832814 0.015169279 edl FBtr0086652 18667525 18667828 2R - 18667676 18667753 3'utr edl FlyBase G24819.1 TCTAGTTATGCTAGCTTATAATGCCTAGTCCTTAGTTCTGCTCGTCATTTAAGTATTAGCGATAATATTCTGCATTTC 42 18667699 0.815674908 17 39 392 0.9375 1.176091259 0.083333333 0.095238095 0.208333333 42 1 2 45 2R:18667676-18667753 7 edl FBtr0086652 18667525 18667828 AGTATTA 7mer-A1 dme-miR-8-3p 2R - 18667680 18667746 3'utr edl FlyBase G18771.1 ATGCTAGCTTATAATGCCTAGTCCTTAGTTCTGCTCGTCATTTAAGTATTAGCGATAATATTCTGCA 29 18667721 0.732285855 12 29 243 1 1.633468456 0.11627907 0.379310345 0.581395349 29 0 0 43 2R:18667680-18667746 7 19.5 784 FBgn0023214 335.02 28.75666667 44.53 0.05820548 0.678103628 0.437907029 -3 19 8 0.25 dme-miR-1008-3p 8mer-A1 AGCTGTGA 2R 18704858 18704865 + 2R_18704858_18704865_+ 0.496821177 0.458805685 0.477813431 0.026881018 Sik3 FBtr0340388|FBtr0344259|FBtr0304025|FBtr0344258|FBtr0304026 18704794|18704794|18704794|18704794|18704794 18705805|18705805|18705805|18705805|18705805 2R + 18704800 18704916 3'utr Sik3 FlyBase G17294.1 TGGAATCCCGCCCTGCTAGCTACCCAAAATGACTACTCGCCTTGCCTAAACTCTGCGTAGCTGTGATTAAAGTCGATATGTACGATATAGCCATCCTAAACCAGTAGCAATTGGACA 73 18704857 0.984407599 15 66 516 0.895348837 1.284430734 0.290697674 0.109589041 0.244186047 73 6 3 77 2R:18704800-18704916 8 Sik3 FBtr0304026|FBtr0340388|FBtr0344259|FBtr0304025|FBtr0344258 18704794|18704794|18704794|18704794|18704794 18705805|18705805|18705805|18705805|18705805 AGCTGTGA 8mer-A1 dme-miR-1008-3p 2R + 18704825 18704920 3'utr Sik3 FlyBase G13180.1 AAAATGACTACTCGCCTTGCCTAAACTCTGCGTAGCTGTGATTAAAGTCGATATGTACGATATAGCCATCCTAAACCAGTAGCAATTGGACAGGAG 49 18704857 0.98051844 13 45 320 0.958333333 1.361727836 0.222222222 0.306122449 0.527777778 49 1 2 69 2R:18704825-18704920 8 45 785 FBgn0262103 424.8866667 8.64 13.18 0.105910596 5.208333333 3.414264036 1 1 1 0.25 dme-miR-308-3p 8mer-m1 CTGTGATT 2R 18705649 18705656 + 2R_18705649_18705656_+ 0.382115515 0.381457055 0.381786285 0.000465559 Sik3 FBtr0340388|FBtr0344259|FBtr0304025|FBtr0344258|FBtr0304026 18704794|18704794|18704794|18704794|18704794 18705805|18705805|18705805|18705805|18705805 2R + 18705602 18705701 3'utr Sik3 FlyBase G17298.1 ACGGATTAAACACAACATTGATAAATCTATTTTTTAATGAAAGACTGCTGTGATTTTACATGTAATTAATTTAGAGCGAAAGAAGGTAGGAGTAAATAAC 277 18705647 0.987338983 20 271 2392 0.973988439 2.527629901 0.046242775 0.198555957 0.358381503 277 9 0 337 2R:18705602-18705701 8 Sik3 FBtr0304026|FBtr0340388|FBtr0344259|FBtr0304025|FBtr0344258 18704794|18704794|18704794|18704794|18704794 18705805|18705805|18705805|18705805|18705805 CTGTGATT 8mer-m1 dme-miR-308-3p 2R + 18705620 18705693 3'utr Sik3 FlyBase G13186.1 TGATAAATCTATTTTTTAATGAAAGACTGCTGTGATTTTACATGTAATTAATTTAGAGCGAAAGAAGGTAGGAG 262 18705647 0.987533432 15 259 2301 0.984415584 2.57863921 0.051948052 0.351145038 0.558441558 262 6 0 379 2R:18705620-18705693 8 261.5 786 FBgn0262103 424.8866667 8.64 13.18 0.61545824 30.2662037 19.84066768 2 2 2 0.25 dme-miR-283-5p 8mer-m1 TGATATTT 2R 18774338 18774345 + 2R_18774338_18774345_+ 0.490400295 0.469058559 0.479729427 0.015090861 Mctp FBtr0346955|FBtr0330004|FBtr0110970|FBtr0345950|FBtr0330005|FBtr0110971 18773742|18773952|18773742|18773742|18773742|18773742 18774667|18774667|18774667|18774824|18774667|18774667 2R + 18774280 18774507 3'utr Mctp FlyBase G17318.1 AGATTCCTTTTTGCGCGAATCCAAATGCGATTAATTATTTATTGTGTATTTCAATTTGTGATATTTTCAAAGAATTTTGCAACTAGGCTTACTACTTAATGTGACTTAAACCACGGAAGCTCCGTACCGCACAGAAGTTTCCCCCAAACTCCATTTACAATTTACCACTCGATTGCACTCGACTCGTTTAAGGACGCTTTTTCATTATATACCTTTACATATATACCT 159 18774334 0.92636924 40 153 1654 0.970149254 2.290034611 0.114427861 0.194968553 0.36318408 159 6 0 195 2R:18774280-18774507 8 Mctp FBtr0330005|FBtr0110971|FBtr0346955|FBtr0330004|FBtr0110970|FBtr0345950 18773742|18773742|18773742|18773952|18773742|18773742 18774667|18774667|18774667|18774667|18774667|18774824 TGATATTT 8mer-m1 dme-miR-283-5p 2R + 18774316 18774405 3'utr Mctp FlyBase G13204.1 ATTTATTGTGTATTTCAATTTGTGATATTTTCAAAGAATTTTGCAACTAGGCTTACTACTTAATGTGACTTAAACCACGGAAGCTCCGTA 108 18774334 0.764711591 14 99 1191 0.915584416 1.848189117 0.168831169 0.342592593 0.538961039 108 12 1 141 2R:18774316-18774405 8 87.5 787 FBgn0034389 335.3666667 10.34333333 15.83333333 0.260908458 8.459555269 5.526315789 4 4 4 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2R 18794753 18794758 - 2R_18794753_18794758_- 0.93412931 0.927012426 0.930570868 0.005032408 MFS15 FBtr0086636|FBtr0086637 18794616|18794616 18794808|18794808 2R - 18794690 18794794 3'utr MFS15 FlyBase G24838.1 CGTGGCCTAAGGATTGGTTGTAGATGTGAAACATTTGTACCTTGAAGGCGAAGCATTCCTTGGAATTGATGAATCGCAATTAGTATCGTATTACTAGTTATACAC 155 18794759 0.843930028 15 151 1016 0.978142077 2.252853031 0.398907104 0.15483871 0.284153005 155 4 0 179 2R:18794690-18794794 6 MFS15 FBtr0086637|FBtr0086636 18794616|18794616 18794808|18794808 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2R - 18794689 18794791 3'utr MFS15 FlyBase G18790.1 GGCCTAAGGATTGGTTGTAGATGTGAAACATTTGTACCTTGAAGGCGAAGCATTCCTTGGAATTGATGAATCGCAATTAGTATCGTATTACTAGTTATACACG 104 18794759 0.977631924 14 101 669 0.972222222 2.146128036 0.381944444 0.317307692 0.506944444 104 4 0 140 2R:18794689-18794791 6 114.5 788 FBgn0034392 393.6666667 26.16666667 39.91 0.290855207 4.375796178 2.868955149 1 1 1 0.25 dme-miR-252-5p 6mer3-8 GTACTT 2R 18821341 18821346 + 2R_18821341_18821346_+ 0.947748595 0.99050783 0.969128212 0.03023532 Phb2 FBtr0086616|FBtr0086615|FBtr0086614|FBtr0112863 18821290|18821290|18821290|18821290 18821839|18821839|18821839|18821839 2R + 18821308 18821358 3'utr Phb2 FlyBase G17331.1 CAAAAAGAGTTTACTTTTAAGTTGAAAACACTTGTACTTTTGGTTTCAATC 20 18821340 0.98698034 5 20 181 1 1.380211242 0.166666667 0.2 0.333333333 20 0 0 24 2R:18821308-18821358 6 Phb2 FBtr0086615|FBtr0086614|FBtr0112863|FBtr0086616 18821290|18821290|18821290|18821290 18821839|18821839|18821839|18821839 GTACTT 6mer3-8 dme-miR-252-5p 2R + 18821326 18821393 3'utr Phb2 FlyBase G13214.1 AAGTTGAAAACACTTGTACTTTTGGTTTCAATCACATTGGCCAAAACTTAGACATAGCCTTCATAATT 22 18821340 0.854977068 9 22 164 1 1.531478917 0.294117647 0.454545455 0.647058824 22 0 0 34 2R:18821326-18821393 6 17.5 789 FBgn0010551 1156.073333 96.49666667 146.7133333 0.015137448 0.181353415 0.119280229 1 1 1 0.25 dme-miR-986-5p 6mer2-7 TTCGAG 2R 18821554 18821559 + 2R_18821554_18821559_+ 0.723629269 0.999478651 0.86155396 0.195054981 Phb2 FBtr0086616|FBtr0112861|FBtr0086615|FBtr0086614|FBtr0112863 18821290|18821508|18821290|18821290|18821290 18821839|18821839|18821839|18821839|18821839 2R + 18821543 18821595 3'utr Phb2 FlyBase G17334.1 ATTGAAATTCCTTCGAGCTAGAGCCTAAGTACCGTTTAGTTTTAACCACTCCC 7 18821550 0.985069156 3 6 50 0.875 0.84509804 0.125 0.142857143 0.25 7 1 0 7 2R:18821543-18821595 6 Phb2 FBtr0086615|FBtr0086614|FBtr0112863|FBtr0086616|FBtr0112861 18821290|18821290|18821290|18821290|18821508 18821839|18821839|18821839|18821839|18821839 TTCGAG 6mer2-7 dme-miR-986-5p 2R + 18821543 18821573 3'utr Phb2 FlyBase G13215.1 ATTGAAATTCCTTCGAGCTAGAGCCTAAGTA 6 18821551 0.66355227 3 5 34 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2R:18821543-18821573 6 5 790 FBgn0010551 1156.073333 96.49666667 146.7133333 0.004324985 0.051815261 0.034080065 4 3 3.5 0.25 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 18822136 18822143 + 2R_18822136_18822143_+ 0.360171843 0.543943355 0.452057599 0.129946145 Phb2 FBtr0112862 18822099 18822250 2R + 18822046 18822155 stop_codon Phb2 FlyBase G17337.1 GAAGGAGAAGAACGTGGGCAACGTGGCGAGCAGCATGGCCGAGCGGATGATGTGATCCACACCTTAGCGGGGGCTTCCTGTCAAGATCCTAGTACAAAGCGCATACAGAA 31 18822135 0.971134777 7 24 133 0.815789474 1.190331698 0.342105263 0.193548387 0.342105263 31 6 1 31 2R:18822046-18822155 8 Phb2 FBtr0112862 18822099 18822250 AGTACAAA 8mer-A1 dme-miR-305-5p 2R + 18822109 18822161 3'utr Phb2 FlyBase G13218.1 TTAGCGGGGGCTTCCTGTCAAGATCCTAGTACAAAGCGCATACAGAACAGAGC 23 18822135 0.951850554 5 15 116 0.676470588 0.884606581 0.235294118 0.347826087 0.558823529 23 9 2 23 2R:18822109-18822161 8 21.5 791 FBgn0010551 1156.073333 96.49666667 146.7133333 0.018597436 0.222805624 0.146544281 1 1 1 0.25 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2R 18822378 18822385 - 2R_18822378_18822385_- 0.628544406 0.629013454 0.62877893 0.000331704 CG15097 FBtr0303237|FBtr0330604|FBtr0086630|FBtr0330605 18822186|18822186|18822186|18822186 18822959|18822608|18822959|18822581 2R - 18822327 18822400 3'utr CG15097 FlyBase G24859.1 ACACACACACATGTTTCTAGTCAAGATCTCTCACACACACACAACATGGGAATGCCGCGGGGACACAACTCCTG 133 18822386 0.999702155 8 127 871 0.960784314 1.69019608 0.019607843 0.135338346 0.248366013 133 4 2 147 2R:18822327-18822400 8 CG15097 FBtr0330605|FBtr0086630|FBtr0330604|FBtr0303237 18822186|18822186|18822186|18822186 18822581|18822959|18822608|18822959 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R - 18822357 18822400 3'utr CG15097 FlyBase G18804.1 ACACACACACATGTTTCTAGTCAAGATCTCTCACACACACACAA 74 18822386 0.83947615 9 71 461 0.965217391 2.045322979 0.017391304 0.432432432 0.634782609 74 4 0 111 2R:18822357-18822400 8 101 792 FBgn0034396 75.66666667 3.096666667 4.676666667 1.334801762 32.61571582 21.59657876 1 1 1 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 18846948 18846955 - 2R_18846948_18846955_- 0.616032166 0.625117873 0.62057502 0.00642456 CG15100 FBtr0086627 18846856 18847082 2R - 18846901 18847065 3'utr CG15100 FlyBase G24926.1 TAAAAATCACGCTGGACGCTTTTACCTCAGCCCTTTTAATCAGGCATTCGATGGCAAATCTTTAGTCACGGACTGGCACAGTTCAATTCATCTCCCATAAGTTTTGCGTTTGCATTTAACAACCTTTTGTATTTATTCGAAGTATGGCTAAATATTCAGTTAGTA 38 18846956 0.797852664 12 38 298 1 1.643452676 0.113636364 0.105263158 0.227272727 38 0 0 44 2R:18846901-18847065 8 CG15100 FBtr0086627 18846856 18847082 TGCATTTA 8mer-A1 dme-miR-277-3p 2R - 18846928 18846967 3'utr CG15100 FlyBase G18855.1 AAGTTTTGCGTTTGCATTTAACAACCTTTTGTATTTATTC 11 18846956 0.989241882 2 10 103 0.923076923 1.079181246 0 0.181818182 0.307692308 11 1 0 12 2R:18846928-18846967 8 12.5 793 FBgn0034401 874.54 30.91333333 47.1 0.014293228 0.404356265 0.265392781 1 1 1 0.25 dme-miR-14-3p 7mer-m8 AAGACTG 2R 18971406 18971412 - 2R_18971406_18971412_- 0.663098184 0.671754166 0.667426175 0.006120716 CG15107 FBtr0331978|FBtr0086600 18971307|18971307 18971590|18971590 2R - 18971383 18971423 3'utr CG15107 FlyBase G24977.1 TAGTCGTTTTTAAGACTGTTGTTATGCATATCGTTCGACGA 9 18971403 0.633926329 4 7 86 0.818181818 0.954242509 0.090909091 0.222222222 0.363636364 9 2 0 9 2R:18971383-18971423 7 CG15107 FBtr0086600|FBtr0331978 18971307|18971307 18971590|18971590 AAGACTG 7mer-m8 dme-miR-14-3p 2R - 18971401 18971422 3'utr CG15107 FlyBase G18891.1 AGTCGTTTTTAAGACTGTTGTT 5 18971405 0.788339959 2 2 27 0.444444444 0.602059991 0.777777778 0.4 0.666666667 5 5 0 4 2R:18971401-18971422 7 6.5 794 FBgn0041702 455.9833333 51.29666667 78.86 0.014254907 0.126713887 0.08242455 -9 -7 -8 0.25 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2R 19133203 19133208 + 2R_19133203_19133208_+ 0.999320977 0.998996012 0.999158494 0.00022981 botv FBtr0086579 19133117 19133706 2R + 19133050 19133222 stop_codon botv FlyBase G17377.1 CGAGCGGACTCCATTCTCTTCAAGACGCGCATCCCGCACGACAAGCAAAAGTGCTTCAAGTACATCTAGTCGTACAACTGATCCCAGAATCCCTATTCCGACAAAGGCGGCCACTTCACTTATTATAACGAGGTGATCACCAGCTGAATGACTTCTAGTTGTAAGTAAAACTT 137 19133205 0.787927289 25 131 885 0.942675159 2.170261715 0.070063694 0.102189781 0.21656051 137 9 0 148 2R:19133050-19133222 6 botv FBtr0086579 19133117 19133706 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 19133045 19133224 stop_codon botv FlyBase G13244.1 AGTACCGAGCGGACTCCATTCTCTTCAAGACGCGCATCCCGCACGACAAGCAAAAGTGCTTCAAGTACATCTAGTCGTACAACTGATCCCAGAATCCCTATTCCGACAAAGGCGGCCACTTCACTTATTATAACGAGGTGATCACCAGCTGAATGACTTCTAGTTGTAAGTAAAACTTAT 68 19133205 0.979698851 15 61 440 0.91 1.481920138 0.13 0.338235294 0.55 68 7 2 91 2R:19133045-19133224 6 57.5 795 FBgn0027535 455.35 15.33 23.50666667 0.126276491 3.750815395 2.446114577 -2 -2 -2 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 2R 19133618 19133623 + 2R_19133618_19133623_+ 0.974132103 0.949259977 0.96169604 0.017587231 botv FBtr0086579 19133117 19133706 2R + 19133570 19133660 3'utr botv FlyBase G17380.1 AGGAAATAGTCTTGAGTAGAGATACCAAATCAAATTTTGAGACTTTATTGTGTTTGCTTAATTAGCATAAGTTGTGTACCGATTTTGAATT 36 19133607 0.960860407 12 35 330 1 1.633468456 0.162790698 0.111111111 0.255813953 36 0 0 43 2R:19133570-19133660 6 botv FBtr0086579 19133117 19133706 TGTGTT 6mer3-8 dme-miR-317-3p 2R + 19133570 19133656 3'utr botv FlyBase G13246.1 AGGAAATAGTCTTGAGTAGAGATACCAAATCAAATTTTGAGACTTTATTGTGTTTGCTTAATTAGCATAAGTTGTGTACCGATTTTG 14 19133606 0.984779594 11 14 117 1 1.342422681 0.454545455 0.428571429 0.636363636 14 0 0 22 2R:19133570-19133656 6 15.5 796 FBgn0027535 455.35 15.33 23.50666667 0.03403975 1.011089367 0.659387408 11 12 11.5 0.25 dme-miR-79-3p 7mer-m8 TAGCTTT 2R 19133967 19133973 - 2R_19133967_19133973_- 0.345631102 0.553963749 0.449797425 0.147313394 CG15118 FBtr0086592|FBtr0086590|FBtr0086591|FBtr0113096 19133725|19133725|19133725|19133725 19134214|19134214|19134214|19134530 2R - 19133948 19134005 3'utr CG15118 FlyBase G24986.1 ATACCATGTATCCAAAGTAGTCCTTGTAGTTGTAGCTTTTGCATTGAATCCGGTATCT 17 19133981 0.753851525 10 16 145 0.947368421 0.954242509 0 0.117647059 0.210526316 17 0 1 18 2R:19133948-19134005 7 CG15118 FBtr0113096|FBtr0086591|FBtr0086590|FBtr0086592 19133725|19133725|19133725|19133725 19134530|19134214|19134214|19134214 TAGCTTT 7mer-m8 dme-miR-79-3p 2R - 19133946 19134000 3'utr CG15118 FlyBase G18899.1 ATGTATCCAAAGTAGTCCTTGTAGTTGTAGCTTTTGCATTGAATCCGGTATCTAT 7 19133982 0.993850904 5 6 77 0.888888889 0.903089987 0.111111111 0.285714286 0.444444444 7 1 0 8 2R:19133946-19134000 7 9.5 797 FBgn0034418 690.5133333 34.72333333 53.01 0.013757881 0.273591245 0.17921147 8 9 8.5 0.25 dme-miR-283-5p 7mer-A1 GATATTA 2R 19140920 19140926 + 2R_19140920_19140926_+ 0.780025165 0.750387661 0.765206413 0.020956877 CG15111 FBtr0086581|FBtr0086580 19140905|19140905 19141034|19141034 2R + 19140871 19140934 stop_codon CG15111 FlyBase G17386.1 AAGTTTGTGGAGAACTACCGTGACGCCGTATACTAGGTGCGATCAACTGGATATTAATTTATGT 13 19140914 0.76680705 6 11 71 0.875 1.146128036 0.25 0.230769231 0.375 13 2 0 14 2R:19140871-19140934 7 CG15111 FBtr0086580|FBtr0086581 19140905|19140905 19141034|19141034 GATATTA 7mer-A1 dme-miR-283-5p 2R + 19140894 19140935 stop_codon CG15111 FlyBase G13251.1 CGCCGTATACTAGGTGCGATCAACTGGATATTAATTTATGTA 5 19140918 0.943838026 3 5 39 1 0.903089987 0 0.6 0.75 5 0 0 8 2R:19140894-19140935 7 5.5 798 FBgn0034419 145.4233333 10.22333333 15.81333333 0.037820616 0.537985002 0.347807757 6 2 4 0.25 dme-miR-968-5p 6mer3-8 ACTACT 2R 19162388 19162393 + 2R_19162388_19162393_+ 0.888028532 0.998969072 0.943498802 0.078446851 ena FBtr0100176|FBtr0086582|FBtr0114623|FBtr0340450|FBtr0086583|FBtr0086584 19161687|19161687|19161687|19161687|19161687|19161687 19162598|19162598|19162598|19163705|19162598|19162598 2R + 19162374 19162480 3'utr ena FlyBase G17408.1 TTTAATATATATGGACTACTCATTAAACTAACCTAAAGGGAACTAGTATTACGACTCAAAAACGAAATGAAAACAATTCCACAAACGTCATCCATCAAAGCTCCTGA 41 19162388 0.952222152 13 38 244 0.918367347 1.653212514 0.020408163 0.170731707 0.306122449 41 4 0 45 2R:19162374-19162480 6 ena FBtr0086583|FBtr0086584|FBtr0114623|FBtr0340450|FBtr0100176|FBtr0086582 19161687|19161687|19161687|19161687|19161687|19161687 19162598|19162598|19162598|19163705|19162598|19162598 ACTACT 6mer3-8 dme-miR-968-5p 2R + 19162372 19162453 3'utr ena FlyBase G13273.1 GGTTTAATATATATGGACTACTCATTAAACTAACCTAAAGGGAACTAGTATTACGACTCAAAAACGAAATGAAAACAATTCC 36 19162386 0.981496756 11 35 251 0.979591837 1.681241237 0 0.305555556 0.489795918 36 1 0 48 2R:19162372-19162453 6 27.5 799 FBgn0000578 7091.176667 212.0766667 326.4733333 0.003878059 0.129670088 0.084233526 0 2 1 0.25 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA 2R 19226817 19226824 + 2R_19226817_19226824_+ 0.414758765 0.40953593 0.412147348 0.003693148 hppy FBtr0340454|FBtr0340456|FBtr0086504|FBtr0340455|FBtr0086503 19226138|19226138|19226138|19226138|19226138 19227193|19227193|19227193|19227193|19227193 2R + 19226762 19226838 3'utr hppy FlyBase G17434.1 GGTTAAACTGCTTTCGATTGGCTCAAAACCGCAACGGAAAATCAAGAACGAGAAATTGAAGAATGCGATATAGGATG 60 19226817 0.932200672 4 58 215 0.96969697 1.505149978 0.090909091 0.1 0.181818182 60 1 1 64 2R:19226762-19226838 8 hppy FBtr0086503|FBtr0340454|FBtr0340456|FBtr0086504|FBtr0340455 19226138|19226138|19226138|19226138|19226138 19227193|19227193|19227193|19227193|19227193 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p 2R + 19226805 19226840 3'utr hppy FlyBase G13296.1 AAGAACGAGAAATTGAAGAATGCGATATAGGATGAT 38 19226817 0.941939091 2 37 138 0.96 1.681241237 0.18 0.315789474 0.48 38 2 0 48 2R:19226805-19226840 8 46 800 FBgn0263395 662.23 18.48666667 28.52 0.069462271 2.488279841 1.612903226 0 0 0 0.25 dme-miR-999-3p 8mer-A1 AGTTAACA 2R 19307854 19307861 - 2R_19307854_19307861_- 0.465183593 0.630474294 0.547828943 0.116878175 EndoB FBtr0113097|FBtr0113098|FBtr0086558|FBtr0086559 19307445|19307445|19307445|19307445 19308386|19308386|19308386|19308386 2R - 19307823 19307866 3'utr EndoB FlyBase G25011.1 ATCTTAGTTAACAAGCGAAATTCTCTGTGCTTTACTATATATCC 10 19307836 0.986357798 6 10 89 1 1.079181246 0.25 0.2 0.333333333 10 0 0 12 2R:19307823-19307866 8 EndoB FBtr0086559|FBtr0086558|FBtr0113098|FBtr0113097 19307445|19307445|19307445|19307445 19308386|19308386|19308386|19308386 AGTTAACA 8mer-A1 dme-miR-999-3p 2R - 19307821 19307874 3'utr EndoB FlyBase G18922.1 TTGTCAATATCTTAGTTAACAAGCGAAATTCTCTGTGCTTTACTATATATCCTA 6 19307838 0.985975524 4 6 56 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 2R:19307821-19307874 8 5 801 FBgn0034433 435.3966667 24.15666667 36.94666667 0.011483781 0.2069822 0.135330206 -25 -23 -24 0.25 dme-miR-12-5p 8mer-A1 AATACTCA 2R 19308294 19308301 - 2R_19308294_19308301_- 0.637033238 0.635415379 0.636224308 0.001143957 EndoB FBtr0113097|FBtr0113098|FBtr0086558|FBtr0086559 19307445|19307445|19307445|19307445 19308386|19308386|19308386|19308386 2R - 19308283 19308315 3'utr EndoB FlyBase G25012.1 ACTCCAAGTACGGCAATACTCATATGTTAAGAA 6 19308299 0.948809333 3 5 26 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2R:19308283-19308315 8 EndoB FBtr0086559|FBtr0086558|FBtr0113098|FBtr0113097 19307445|19307445|19307445|19307445 19308386|19308386|19308386|19308386 AATACTCA 8mer-A1 dme-miR-12-5p 2R - 19308232 19308312 3'utr EndoB FlyBase G18923.1 CCAAGTACGGCAATACTCATATGTTAAGAAAGCAGACACGATCGAGAGAAGGGAACGGCAATTGGACAATTAAAGGATGCG 11 19308290 0.940412771 5 11 44 1 1.113943352 0.076923077 0.181818182 0.307692308 11 0 0 13 2R:19308232-19308312 8 6.5 802 FBgn0034433 435.3966667 24.15666667 36.94666667 0.014928915 0.269076859 0.175929267 -2 -11 -6.5 0.25 dme-miR-968-5p 7mer-m8 ACTACTT 2R 19367289 19367295 - 2R_19367289_19367295_- 0.398437978 0.436373536 0.417405757 0.026824449 CG9416 FBtr0334008|FBtr0086555 19367246|19367246 19367478|19367478 2R - 19367286 19367393 3'utr CG9416 FlyBase G25019.1 ATGGAGTGTACCAATTTTACCTAATCCAACGAACAAAGTGTCGATAAGCATGGCACGTCCTAAATTGTATTAGTATTTACGATTAGAACACTGTAGTTACTACTTTGT 21 19367301 0.959281365 12 21 138 1 1.414973348 0.307692308 0.238095238 0.384615385 21 0 0 26 2R:19367286-19367393 7 CG9416 FBtr0334008|FBtr0086555 19367246|19367246 19367478|19367478 ACTACTT 7mer-m8 dme-miR-968-5p 2R - 19367280 19367313 3'utr CG9416 FlyBase G18926.1 GATTAGAACACTGTAGTTACTACTTTGTAATTTT 6 19367302 0.986115163 3 5 54 0.818181818 0.954242509 0.272727273 0.5 0.727272727 6 2 0 9 2R:19367280-19367313 7 6 803 FBgn0034438 3 0.123333333 0.186666667 2 48.64864865 32.14285714 6 7 6.5 0.25 dme-miR-11-3p 7mer-m1 TGTGATG 2R 19392219 19392225 - 2R_19392219_19392225_- 0.584751886 0.579750784 0.582251335 0.003536312 SdhA FBtr0086553|FBtr0086552|FBtr0086554 19391861|19391861|19391861 19392398|19392398|19392398 2R - 19392214 19392246 3'utr SdhA FlyBase G25033.1 CGGCAGCGGTTCCGGGCATTTTGTGATGAAACG 8 19392226 0.6701727 2 8 54 1 0.903089987 0.25 0 0 8 0 0 8 2R:19392214-19392246 7 SdhA FBtr0086553|FBtr0086552|FBtr0086554 19391861|19391861|19391861 19392398|19392398|19392398 TGTGATG 7mer-m1 dme-miR-11-3p 2R - 19392214 19392242 3'utr SdhA FlyBase G18934.1 AGCGGTTCCGGGCATTTTGTGATGAAACG 6 19392227 0.698667055 3 6 39 1 0.77815125 0.166666667 0 0 6 0 0 6 2R:19392214-19392242 7 7 804 FBgn0261439 831.86 37.47666667 57.27666667 0.008414878 0.186782887 0.122213816 1 2 1.5 0.25 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 2R 19430692 19430697 - 2R_19430692_19430697_- 0.623579035 0.519881674 0.571730354 0.073325064 Fak FBtr0301883|FBtr0086542|FBtr0301882|FBtr0114605|FBtr0086543|FBtr0086544 19430657|19430657|19430657|19430657|19430657|19430657 19431105|19431105|19431105|19431105|19431105|19431105 2R - 19430669 19430712 3'utr Fak FlyBase G25076.1 CGAAGCTAATTATTTTGGTGCAAGGTTCAATCACAAAAAATAAA 6 19430698 0.986234677 4 6 48 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 2R:19430669-19430712 6 Fak FBtr0086543|FBtr0086544|FBtr0301882|FBtr0114605|FBtr0301883|FBtr0086542 19430657|19430657|19430657|19430657|19430657|19430657 19431105|19431105|19431105|19431105|19431105|19431105 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 2R - 19430676 19430713 3'utr Fak FlyBase G18957.1 TCGAAGCTAATTATTTTGGTGCAAGGTTCAATCACAAA 7 19430697 0.801824257 2 7 60 1 1 0.2 0.428571429 0.6 7 0 0 10 2R:19430676-19430713 6 6 805 FBgn0020440 860.4633333 21.11 32.3 0.006972987 0.284225486 0.185758514 1 0 0.5 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 2R 19430739 19430745 - 2R_19430739_19430745_- 0.521223104 0.521207446 0.521215275 1.11E-05 Fak FBtr0301883|FBtr0086542|FBtr0301882|FBtr0114605|FBtr0086543|FBtr0086544 19430657|19430657|19430657|19430657|19430657|19430657 19431105|19431105|19431105|19431105|19431105|19431105 2R - 19430726 19430783 3'utr Fak FlyBase G25077.1 TTCATCATCAATTCGGGTGTGTTTTAAGACATTTATATTGTGATTTATAGTTTACCAT 28 19430746 0.714967241 10 27 306 0.971428571 1.531478917 0.171428571 0.214285714 0.371428571 28 1 0 34 2R:19430726-19430783 7 Fak FBtr0086543|FBtr0086544|FBtr0301882|FBtr0114605|FBtr0301883|FBtr0086542 19430657|19430657|19430657|19430657|19430657|19430657 19431105|19431105|19431105|19431105|19431105|19431105 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 19430718 19430758 3'utr Fak FlyBase G18958.1 AAGACATTTATATTGTGATTTATAGTTTACCATTATAGGCT 20 19430747 0.587276912 8 18 239 0.923076923 1.079181246 0.230769231 0.2 0.384615385 20 1 1 24 2R:19430718-19430758 7 22.5 806 FBgn0020440 860.4633333 21.11 32.3 0.026148703 1.065845571 0.696594427 1 2 1.5 0.25 dme-miR-283-5p 6mer3-8 TGATAT 2R 19485631 19485636 + 2R_19485631_19485636_+ 0.756196453 0.91818574 0.837191096 0.114543662 par-1 FBtr0330244 19483406 19485686 2R + 19485611 19485671 3'utr par-1 FlyBase G17639.1 AATCATGTTGTAAGAATATCTGATATACATACATACATAGATGTTTTAATTAATAAATAAA 5 19485634 0.96577454 3 5 37 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 2R:19485611-19485671 6 par-1 FBtr0330244 19483406 19485686 TGATAT 6mer3-8 dme-miR-283-5p 2R + 19485607 19485647 3'utr par-1 FlyBase G13429.1 GAATAATCATGTTGTAAGAATATCTGATATACATACATACA 12 19485634 0.756985156 5 12 79 1 1.301029996 0.1 0.583333333 0.75 12 0 0 20 2R:19485607-19485647 6 7 807 FBgn0260934 5641.8 137.7133333 211.53 0.001240739 0.050830227 0.033092233 -3 -3 -3 0.25 dme-miR-277-3p 7mer-m8 TGCATTT 2R 19494075 19494081 + 2R_19494075_19494081_+ 0.598732971 0.619734477 0.609233724 0.014850303 Rep FBtr0086462 19493874 19494125 2R + 19494052 19494090 3'utr Rep FlyBase G17649.1 ATGTTTAAATGTGAGTGTTTCTGTGCATTTTGCTTTGAT 9 19494081 0.966513053 5 9 88 1 1.041392685 0.272727273 0.111111111 0.272727273 9 0 0 11 2R:19494052-19494090 7 Rep FBtr0086462 19493874 19494125 TGCATTT 7mer-m8 dme-miR-277-3p 2R + 19494053 19494093 3'utr Rep FlyBase G13436.1 TGTTTAAATGTGAGTGTTTCTGTGCATTTTGCTTTGATAAA 5 19494069 0.974675023 5 5 57 1 0.903089987 0.125 0.4 0.625 5 0 0 8 2R:19494053-19494093 7 6 808 FBgn0026378 268.7033333 16.93666667 25.81 0.022329459 0.354260972 0.232468036 -6 6 0 0.25 dme-miR-8-3p 7mer-m8 CAGTATT 2R 19665393 19665399 - 2R_19665393_19665399_- 0.492970945 0.653852456 0.573411701 0.11376047 hrg FBtr0111010 19665258 19666023 2R - 19665347 19665419 3'utr hrg FlyBase G25135.1 ACTTTTACGTATTCTATAACCAGTATTCCGCCAATGTGGAAACAATCTAACAAAAACATACCTCTAATTTTTT 13 19665394 0.983287683 8 12 92 0.9375 1.176091259 0 0.230769231 0.375 13 1 0 15 2R:19665347-19665419 7 hrg FBtr0111010 19665258 19666023 CAGTATT 7mer-m8 dme-miR-8-3p 2R - 19665337 19665403 3'utr hrg FlyBase G19008.1 TAACCAGTATTCCGCCAATGTGGAAACAATCTAACAAAAACATACCTCTAATTTTTTAAGTTTTAAA 6 19665385 0.95826897 4 6 33 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 2R:19665337-19665403 7 7.5 809 FBgn0015949 2895.236667 92.73333333 142.2466667 0.002590462 0.080877067 0.052725313 -5 -14 -9.5 0.25 dme-miR-12-5p 7mer-A1 ATACTCA 2R 20261272 20261278 + 2R_20261272_20261278_+ 0.823251154 0.82334184 0.823296497 6.41E-05 Hsl FBtr0086270|FBtr0086271|FBtr0086272 20260958|20260958|20260958 20261726|20261726|20261726 2R + 20261240 20261354 3'utr Hsl FlyBase G17690.1 AATTTTATATGACACAGCTTTCTATGTTTTATATACTCACAAACTAAGTATAGGATACGTATGTATGTAGCTTCTAGCATAAGCAAGCCAAGTATGCAAGTATTGGAAGCGTGTA 33 20261267 0.895440853 15 32 291 0.976744186 1.62324929 0.139534884 0.272727273 0.441860465 33 1 0 42 2R:20261240-20261354 7 Hsl FBtr0086272|FBtr0086270|FBtr0086271 20260958|20260958|20260958 20261726|20261726|20261726 ATACTCA 7mer-A1 dme-miR-12-5p 2R + 20261244 20261284 3'utr Hsl FlyBase G13466.2 TTATATGACACAGCTTTCTATGTTTTATATACTCACAAACT 9 20261266 0.635329449 7 8 87 0.928571429 1.113943352 0.071428571 0.444444444 0.642857143 9 1 0 13 2R:20261244-20261284 7 9 810 FBgn0034491 654.3266667 22.12333333 33.89333333 0.013754598 0.406810306 0.265538946 5 6 5.5 0.25 dme-miR-980-3p 6mer2-7 GCAGCT 2R 20261551 20261556 + 2R_20261551_20261556_+ 0.989770619 0.998878605 0.994324612 0.006440329 Hsl FBtr0086270|FBtr0086271|FBtr0086272 20260958|20260958|20260958 20261726|20261726|20261726 2R + 20261386 20261644 3'utr Hsl FlyBase G17691.1 ACGATTAATGCTCTTGAATGCAGGCACACACTCGCTTAAAGCTCTTTGTTGCAAAACTCCCGACTATGTGCCTCATACGGAACGAGTACTTATACACAGTGAATAGAATAATCGCCCATTATTACCCTTGATTTAGAACTCCCCAATGGTATGTCCAGATTTTCTGCAGCTGCGGAGGCTAACAAACTTCAATGTCGGAGATATGCCAAGGTTTTTTGTCTATCCCACGCCAAGGTGTTTGATAAACCACTACTCTTAA 64 20261549 0.813340494 29 59 388 0.935064935 1.380211242 0.233766234 0.125 0.272727273 64 3 2 72 2R:20261386-20261644 6 Hsl FBtr0086272|FBtr0086270|FBtr0086271 20260958|20260958|20260958 20261726|20261726|20261726 GCAGCT 6mer2-7 dme-miR-980-3p 2R + 20261479 20261573 3'utr Hsl FlyBase G13470.1 ACACAGTGAATAGAATAATCGCCCATTATTACCCTTGATTTAGAACTCCCCAATGGTATGTCCAGATTTTCTGCAGCTGCGGAGGCTAACAAACT 23 20261532 0.977059728 9 22 143 0.967741935 1.477121255 0.258064516 0.260869565 0.451612903 23 1 0 30 2R:20261479-20261573 6 13.5 811 FBgn0034491 654.3266667 22.12333333 33.89333333 0.020631896 0.610215459 0.398308419 2 19 10.5 0.25 dme-miR-318-3p 7mer-m8 CCCAGTG 2R 20261683 20261689 + 2R_20261683_20261689_+ 0.491853924 0.686740942 0.589297433 0.137805919 Hsl FBtr0086270|FBtr0086271|FBtr0086272 20260958|20260958|20260958 20261726|20261726|20261726 2R + 20261646 20261705 3'utr Hsl FlyBase G17691.2 ATGTATATGTTTGCAATCTCTCTCTCCTTAAACGATACCCAGTGTTATATATGGAATGCG 17 20261670 0.786645961 9 16 150 1 1.255272505 0.111111111 0.058823529 0.111111111 17 0 0 18 2R:20261646-20261705 7 Hsl FBtr0086272|FBtr0086270|FBtr0086271 20260958|20260958|20260958 20261726|20261726|20261726 CCCAGTG 7mer-m8 dme-miR-318-3p 2R + 20261626 20261705 3'utr Hsl FlyBase G13471.1 GATAAACCACTACTCTTAATATGTATATGTTTGCAATCTCTCTCTCCTTAAACGATACCCAGTGTTATATATGGAATGCG 16 20261668 0.990491578 8 13 134 0.85 0.929418926 0.1 0.1875 0.35 16 2 1 17 2R:20261626-20261705 7 6 812 FBgn0034491 654.3266667 22.12333333 33.89333333 0.009169732 0.271206871 0.177025964 13 15 14 0.25 dme-miR-12-5p 6mer2-7 ATACTC 2R 20270957 20270962 + 2R_20270957_20270962_+ 0.879870858 0.998532655 0.939201756 0.083906563 CG8908 FBtr0339542 20270784 20270994 2R + 20270937 20270975 3'utr CG8908 FlyBase G17698.1 AATCATCAGTCGCCAAATTGATACTCTTATATGTAAATC 17 20270955 0.838425112 2 16 148 0.944444444 1.230448921 0 0.058823529 0.111111111 17 1 0 17 2R:20270937-20270975 6 CG8908 FBtr0339542 20270784 20270994 ATACTC 6mer2-7 dme-miR-12-5p 2R + 20270944 20270974 3'utr CG8908 FlyBase G13479.1 AGTCGCCAAATTGATACTCTTATATGTAAAT 14 20270955 0.707905213 4 13 100 0.913043478 1.322219295 0.043478261 0.357142857 0.608695652 14 2 0 21 2R:20270944-20270974 6 15.5 813 FBgn0034493 153.9366667 3.596666667 5.44 0.10069076 4.309545876 2.849264706 2 2 2 0.25 dme-miR-12-5p 6mer2-7 ATACTC 2R 20271762 20271767 - 2R_20271762_20271767_- 0.832540933 0.861085677 0.846813305 0.020184222 CG10444 FBtr0086305 20271651 20272417 2R - 20271751 20272207 3'utr CG10444 FlyBase G25199.1 TTATTAGTCGTGTTGCAAATGTTCACAAGCGCATCATTAAGAGGCCTCTTAAGAATAGTCAAATGTTTTTTACAAGAACGTATCAAAAGTAGGAGTCTACCTCAATGAACTTTTACAGAGGGACAATAATCAATTTGGAGCCTAAAAGCGAGTTGGCCGACTACTTTCCCATGTTGAGCATTGGCAGCCACAATGCCCCACATAAATTATTGATTTAGTAGTACATCTAATTTTAATGGGATATTTATATTCATACCTCTTAGTTACTCGATATTTGCATACATAGATAACATAATAACATTACAATAATACACTACAGTGAGCACCGCCTATAAATAGTTACTACATGGCTCTTAAAGCATTACATTGCGCCACAGTGTGAATTCTGTTTACTTATATACCTCTACTATATGTACACAAATATACTATAGACTAATTATATACTCGTGTCGTGTCG 76 20271779 0.984333272 42 70 552 0.921348315 1.612783857 0.134831461 0.171052632 0.292134831 76 6 1 82 2R:20271751-20272207 6 CG10444 FBtr0086305 20271651 20272417 ATACTC 6mer2-7 dme-miR-12-5p 2R - 20271735 20271889 3'utr CG10444 FlyBase G19056.1 GTGAGCACCGCCTATAAATAGTTACTACATGGCTCTTAAAGCATTACATTGCGCCACAGTGTGAATTCTGTTTACTTATATACCTCTACTATATGTACACAAATATACTATAGACTAATTATATACTCGTGTCGTGTCGCAATCAACCATTGAAC 21 20271779 0.979099797 13 20 144 0.9 1.431363764 0.1 0.380952381 0.566666667 21 3 0 27 2R:20271735-20271889 6 5.5 814 FBgn0034494 948.11 41.53333333 63.96 0.005801015 0.132423756 0.085991245 12 12 12 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 2R 20559469 20559475 - 2R_20559469_20559475_- 0.509717867 0.51716036 0.513439114 0.005262642 Mgat1 FBtr0086259 20559154 20560039 2R - 20559451 20559566 3'utr Mgat1 FlyBase G25232.2 TAGCAATGGTTAAGTTATAGTATGCAGCGTGTAATTTGTAGCATTTAAGTTGATCCAACTAGAGTTCTAACGGCAACGGACGTGTAATATTTGTGATTTTTGATTATTTAATTTAC 172 20559477 0.985210997 18 162 1872 0.95631068 1.817344971 0.427184466 0.162790698 0.300970874 172 7 2 197 2R:20559451-20559566 7 Mgat1 FBtr0086259 20559154 20560039 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 20559451 20559534 3'utr Mgat1 FlyBase G19081.1 AATTTGTAGCATTTAAGTTGATCCAACTAGAGTTCTAACGGCAACGGACGTGTAATATTTGTGATTTTTGATTATTTAATTTAC 118 20559477 0.975422873 14 111 1290 0.948571429 1.742986833 0.394285714 0.389830508 0.588571429 118 7 2 166 2R:20559451-20559534 7 129.5 815 FBgn0034521 428.4 18.24333333 27.83333333 0.302287582 7.098483464 4.652694611 2 2 2 0.25 dme-miR-970-3p 6mer3-8 TCTTAT 2R 20606960 20606965 - 2R_20606960_20606965_- 0.64315437 0.995243604 0.819198987 0.248964661 Hil FBtr0086255|FBtr0086256 20606879|20606879 20607416|20607416 2R - 20606956 20606998 3'utr Hil FlyBase G25250.1 AAACGCAACGTTGCCCCTTATGCATGAACTTTATCTTATACAT 10 20606980 0.778221389 4 10 82 1 1.113943352 0 0.2 0.384615385 10 0 0 13 2R:20606956-20606998 6 Hil FBtr0086255|FBtr0086256 20606879|20606879 20607416|20607416 TCTTAT 6mer3-8 dme-miR-970-3p 2R - 20606957 20606997 3'utr Hil FlyBase G19096.1 AACGCAACGTTGCCCCTTATGCATGAACTTTATCTTATACA 7 20606973 0.863722941 4 5 64 0.75 0.77815125 0 0.142857143 0.25 7 2 0 6 2R:20606957-20606997 6 5.5 816 FBgn0050147 419.7666667 15.18666667 23.17333333 0.013102517 0.362159789 0.237341772 15 8 11.5 0.25 dme-miR-14-3p 8mer-A1 AAGACTGA 2R 20620888 20620895 + 2R_20620888_20620895_+ 0.634474945 0.639151176 0.636813061 0.003306643 CG9945 FBtr0086226|FBtr0086225 20620747|20620747 20620997|20621081 2R + 20620842 20620914 3'utr CG9945 FlyBase G17751.1 ATATTCACCACAGTCGGGCCGGCTGGGATAATTGGTTCTATTAAATAAGACTGAAGAATATGTCACTCACTTG 88 20620887 0.785108672 15 84 616 0.94 1.973127854 0.17 0.125 0.23 88 6 0 94 2R:20620842-20620914 8 CG9945 FBtr0086225 20620747 20621081 AAGACTGA 8mer-A1 dme-miR-14-3p 2R + 20620814 20620907 3'utr CG9945 FlyBase G13517.1 TAGTGGCTTGCCTAAGCGACGCACGAGAATATTCACCACAGTCGGGCCGGCTGGGATAATTGGTTCTATTAAATAAGACTGAAGAATATGTCAC 40 20620886 0.985662323 10 34 282 0.8125 1.414973348 0.140625 0.375 0.609375 40 11 1 52 2R:20620814-20620907 8 42.5 817 FBgn0034527 339.9533333 21.37333333 32.82 0.125017159 1.988459139 1.294942108 1 2 1.5 0.25 dme-miR-932-5p 8mer-A1 GGAATTGA 2R 20634028 20634035 - 2R_20634028_20634035_- 0.671200499 0.674752437 0.672976468 0.002511573 rig FBtr0086252 20633874 20634190 2R - 20634009 20634053 3'utr rig FlyBase G25265.1 AATAGCCAGAAACTGTGTGGAATTGAAACCGATTTGAGTCGCCTT 11 20634037 0.895031137 4 8 48 0.923076923 1.079181246 0.307692308 0.181818182 0.307692308 11 1 0 12 2R:20634009-20634053 8 rig FBtr0086252 20633874 20634190 GGAATTGA 8mer-A1 dme-miR-932-5p 2R - 20634009 20634052 3'utr rig FlyBase G19107.1 ATAGCCAGAAACTGTGTGGAATTGAAACCGATTTGAGTCGCCTT 10 20634036 0.767282895 6 10 44 1 1.113943352 0 0.3 0.461538462 10 0 0 13 2R:20634009-20634052 8 9 818 FBgn0250850 1237.703333 36.17666667 55.41333333 0.007271532 0.248779139 0.162415784 2 1 1.5 0.25 dme-miR-307a-3p 6mer2-7 GTTGTG 2R 20642498 20642503 + 2R_20642498_20642503_+ 0.724039176 0.91156249 0.817800833 0.132598997 CG11110 FBtr0086231 20642416 20642558 2R + 20642456 20642539 3'utr CG11110 FlyBase G17760.1 CCAATTGTGTACATACTGAACCGTATATTTTATAAACAATTTGTTGTGTTCCCGCATGCAAAGCAAAGTAGGATGTTCCAAAGT 9 20642499 0.969251538 9 9 53 1 1.079181246 0.083333333 0.333333333 0.5 9 0 0 12 2R:20642456-20642539 6 CG11110 FBtr0086231 20642416 20642558 GTTGTG 6mer2-7 dme-miR-307a-3p 2R + 20642477 20642539 3'utr CG11110 FlyBase G13523.1 CGTATATTTTATAAACAATTTGTTGTGTTCCCGCATGCAAAGCAAAGTAGGATGTTCCAAAGT 16 20642499 0.663061903 5 14 116 0.80952381 0.929418926 0.095238095 0.25 0.428571429 16 3 1 17 2R:20642477-20642539 6 8 819 FBgn0034535 57.65333333 9.79 14.88666667 0.138760407 0.817160368 0.537393641 -1 -1 -1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 20662888 20662893 - 2R_20662888_20662893_- 0.999001452 0.994526888 0.99676417 0.00316402 Fem-1 FBtr0086246|FBtr0086246|FBtr0086246|FBtr0086245|FBtr0086245|FBtr0086245 20662472|20662472|20662472|20662472|20662472|20662472 20662931|20662931|20662931|20662931|20662931|20662931 2R - 20662868 20662946 stop_codon Fem-1 FlyBase G25284.1 AAGGTGCTGCCGTAGATAGTCAATGGCTTGAGCCGCAACTGAAGTAATTAGAACTGTGAATACAATAAGCCACGTTGGA 42 20662886 0.926851832 10 38 223 0.9 1.352182518 0.14 0.166666667 0.3 42 4 1 45 2R:20662868-20662946 6 Fem-1 FBtr0086245|FBtr0086245|FBtr0086245|FBtr0086246|FBtr0086246|FBtr0086246 20662472|20662472|20662472|20662472|20662472|20662472 20662931|20662931|20662931|20662931|20662931|20662931 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 20662875 20662942 stop_codon Fem-1 FlyBase G19121.1 TGCTGCCGTAGATAGTCAATGGCTTGAGCCGCAACTGAAGTAATTAGAACTGTGAATACAATAAGCCA 28 20662899 0.789405457 10 24 144 0.825 1.041392685 0.275 0.321428571 0.525 28 5 2 33 2R:20662875-20662942 6 27.5 820 FBgn0034542 388.61 17.94666667 27.52666667 0.070765034 1.532317979 0.999031242 -7 6 -0.5 0.25 dme-miR-34-5p 7mer-A1 ACTGCCA 2R 20827762 20827768 - 2R_20827762_20827768_- 0.813762614 0.819700781 0.816731698 0.004198941 sktl FBtr0071563 20827280 20827991 2R - 20827755 20827789 5'utr sktl FlyBase G25311.1 ATGTGGCGCCCGTGCTAATTGACTGCCAACTAGAC 12 20827771 0.738087096 2 12 68 1 1.079181246 0.416666667 0 0 12 0 0 12 2R:20827755-20827789 7 sktl FBtr0071563 20827280 20827991 ACTGCCA 7mer-A1 dme-miR-34-5p 2R - 20827748 20827796 5'utr sktl FlyBase G19139.1 GAAATTTATGTGGCGCCCGTGCTAATTGACTGCCAACTAGACACGCTAC 11 20827770 0.842636229 3 9 60 0.882352941 0.698970004 0.176470588 0.454545455 0.647058824 11 0 2 15 2R:20827748-20827796 7 11 821 FBgn0016984 2187.616667 79.33666667 122.04 0.005028303 0.138649637 0.090134382 3 2 2.5 0.25 dme-miR-970-3p 7mer-m8 TCTTATG 2R 21006788 21006794 + 2R_21006788_21006794_+ 0.436649716 0.505745722 0.471197719 0.04885825 CG10543 FBtr0071524|FBtr0332594 21006244|21006244 21007740|21007740 2R + 21006709 21006809 3'utr CG10543 FlyBase G17812.1 ATATGAAGCATATATATTAGGCTAAGCAACTATACAATAATGGCAGACAGACCACAACCACAAGCAACTTTCGAACAAATCTTATGCTTATTTAACATTTA 32 21006790 0.981538828 10 31 244 0.973684211 1.568201724 0.052631579 0.125 0.263157895 32 1 0 37 2R:21006709-21006809 7 CG10543 FBtr0332594|FBtr0071524 21006244|21006244 21007740|21007740 TCTTATG 7mer-m8 dme-miR-970-3p 2R + 21006764 21006833 3'utr CG10543 FlyBase G13554.1 AACCACAAGCAACTTTCGAACAAATCTTATGCTTATTTAACATTTACCATACGAGTTATGAACGCAACGC 11 21006790 0.984034172 6 11 90 1 1.322219295 0 0.636363636 0.80952381 11 0 0 21 2R:21006764-21006833 7 16 822 FBgn0034570 1491.83 26.02 40.1 0.010725083 0.614911606 0.399002494 -2 -2 -2 0.25 dme-miR-8-3p 8mer-A1 CAGTATTA 2R 21088057 21088064 + 2R_21088057_21088064_+ 0.529701807 0.543136996 0.536419402 0.009500121 Treh FBtr0071540|FBtr0071538|FBtr0071539|FBtr0071536|FBtr0332423|FBtr0071537 21086953|21086953|21086953|21086953|21086953|21086953 21088226|21088226|21088226|21088226|21088226|21088226 2R + 21087963 21088129 3'utr Treh FlyBase G17844.1 ATTGCTACTCAAGTAGTGTGATTCCCCCCTCCGTGTTTGTGCGTGTGTTGTGAAGTCTGTAGTTGCTAACGTTTTTCGTTGAGTGCGGAGATTGCAGTATTAGTTTATCATTATTTGGTAGTTGAAGTGAGAGTTGTATATACTGAATTTATATGGGCATGCCCGAA 232 21088054 0.898140458 22 228 2040 0.985714286 2.139879086 0.05 0.168103448 0.310714286 232 3 1 276 2R:21087963-21088129 8 Treh FBtr0071536|FBtr0332423|FBtr0071537|FBtr0071540|FBtr0071538|FBtr0071539 21086953|21086953|21086953|21086953|21086953|21086953 21088226|21088226|21088226|21088226|21088226|21088226 CAGTATTA 8mer-A1 dme-miR-8-3p 2R + 21088009 21088138 3'utr Treh FlyBase G13577.1 GTTGTGAAGTCTGTAGTTGCTAACGTTTTTCGTTGAGTGCGGAGATTGCAGTATTAGTTTATCATTATTTGGTAGTTGAAGTGAGAGTTGTATATACTGAATTTATATGGGCATGCCCGAAATTGTTATT 186 21088054 0.900389723 20 181 1678 0.97689769 2.170261715 0.02970297 0.440860215 0.656765677 186 6 1 296 2R:21088009-21088138 8 151.5 823 FBgn0003748 466.8133333 20.13666667 30.89333333 0.324540859 7.52358881 4.903970652 3 3 3 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 21123786 21123793 - 2R_21123786_21123793_- 0.429527844 0.606868356 0.5181981 0.125398741 CG4050 FBtr0071637|FBtr0071638 21123733|21123733 21124117|21124117 2R - 21123782 21123824 3'utr CG4050 FlyBase G25374.2 ACGTAATTTATATATGAAGGCCTGACGGTCTTGCATTTATTTA 8 21123794 0.968906009 3 6 64 0.75 0.77815125 0.125 0 0 8 2 0 6 2R:21123782-21123824 8 CG4050 FBtr0071637|FBtr0071638 21123733|21123733 21124117|21124117 TGCATTTA 8mer-A1 dme-miR-277-3p 2R - 21123755 21123808 3'utr CG4050 FlyBase G19189.1 AAGGCCTGACGGTCTTGCATTTATTTAAATAACGTTAGGACGTGTACTAAAATA 7 21123794 0.987773602 4 7 62 1 1 0.3 0.428571429 0.6 7 0 0 10 2R:21123755-21123808 8 6 824 FBgn0020312 364 12.77333333 19.31 0.016483516 0.469728601 0.310719834 1 1 1 0.25 dme-miR-252-5p 7mer-m8 GTACTTA 2R 21123956 21123962 - 2R_21123956_21123962_- 0.587857174 0.588296639 0.588076906 0.000310703 CG4050 FBtr0071637|FBtr0071638 21123733|21123733 21124117|21124117 2R - 21123896 21124048 3'utr CG4050 FlyBase G25375.1 AAGGTTCCCACATTCTGTGAGACATACGGAGTCTGATAAAAATAACACAAAGTGAAGATATGTGGTCCATTCCACACAATTCCGTTGTACTTATTAGTTATTAACGTAATTCTTTGATCATATACTCGTTTTGAAGATATTTATACAATTTTT 144 21123963 0.758965847 33 134 1291 0.934911243 1.596597096 0.142011834 0.166666667 0.289940828 144 8 3 158 2R:21123896-21124048 7 CG4050 FBtr0071637|FBtr0071638 21123733|21123733 21124117|21124117 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 21123903 21124046 3'utr CG4050 FlyBase G19190.1 GGTTCCCACATTCTGTGAGACATACGGAGTCTGATAAAAATAACACAAAGTGAAGATATGTGGTCCATTCCACACAATTCCGTTGTACTTATTAGTTATTAACGTAATTCTTTGATCATATACTCGTTTTGAAGATATTTATAC 95 21123963 0.772790172 26 90 783 0.957142857 1.826074803 0.221428571 0.347368421 0.557142857 95 5 1 134 2R:21123903-21124046 7 57 825 FBgn0020312 364 12.77333333 19.31 0.156593407 4.462421712 2.951838426 1 1 1 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 21129646 21129653 - 2R_21129646_21129653_- 0.498304355 0.498709662 0.498507009 0.00028659 Magi FBtr0071636|FBtr0342874|FBtr0342873 21129461|21129461|21129461 21129874|21129874|21129874 2R - 21129550 21129695 3'utr Magi FlyBase G25389.1 TTCTTAAGATACCGATCATTATCTTAGGCTAAGTTACTGCTTGTACTTAAACGTTAAGACAATTTGCCAGTTTGTGAGATATTAATCACTTAGCTTAAGCTGTTTTAGACATATACGAATTGTACAAATGTAAAGGACTTTAAATT 98 21129654 0.797334114 26 89 797 0.925 1.443262987 0.066666667 0.183673469 0.333333333 98 6 3 111 2R:21129550-21129695 8 Magi FBtr0071636|FBtr0342874|FBtr0342873 21129461|21129461|21129461 21129874|21129874|21129874 GTACTTAA 8mer-A1 dme-miR-252-5p 2R - 21129526 21129690 3'utr Magi FlyBase G19200.1 AAGATACCGATCATTATCTTAGGCTAAGTTACTGCTTGTACTTAAACGTTAAGACAATTTGCCAGTTTGTGAGATATTAATCACTTAGCTTAAGCTGTTTTAGACATATACGAATTGTACAAATGTAAAGGACTTTAAATTTTTATCTCGAGTATGTATATTATT 92 21129654 0.988612359 24 84 787 0.923076923 1.51851394 0.13986014 0.391304348 0.608391608 92 8 3 132 2R:21129526-21129690 8 43.5 826 FBgn0034590 938.3433333 22.88 35.01 0.046358298 1.901223776 1.242502142 1 1 1 0.25 dme-bantam-3p 6mer3-8 TGATCT 2R 21145453 21145458 + 2R_21145453_21145458_+ 0.986883957 0.987688759 0.987286358 0.00056908 Xbp1 FBtr0310044 21144863 21145750 2R + 21145285 21145523 stop_codon Xbp1 FlyBase G17860.1 AGGCGATCTCCCCGTTGGCCAAATCCCCCGCATTGTCTCTACACTCGGCCACCTCGGACCATGGATACGAGTCCATACTGGGCTCTCCCACATCCGTGGCTCTCACTCTGCCCGCAGATGAGGACGATTTCCCCTGGGAGAGCAACTTTGACGAGCTGTTTCCCAGTTTGATCTGAGTTTTTCAAGCTGAAAACTTCGTTCTGTCTCTCTTTTATTGTTAAGTTTGGCCGGCCGCCGTT 201 21145452 0.90449879 44 195 1596 0.976284585 1.790636962 0.134387352 0.208955224 0.371541502 201 3 3 247 2R:21145285-21145523 6 Xbp1 FBtr0310044 21144863 21145750 TGATCT 6mer3-8 dme-bantam-3p 2R + 21145374 21145473 stop_codon Xbp1 FlyBase G13597.1 ACATCCGTGGCTCTCACTCTGCCCGCAGATGAGGACGATTTCCCCTGGGAGAGCAACTTTGACGAGCTGTTTCCCAGTTTGATCTGAGTTTTTCAAGCTG 79 21145452 0.858162389 16 66 450 0.956896552 1.744292983 0.224137931 0.358974359 0.568965517 78 4 1 111 2R:21145374-21145473 6 44.5 827 FBgn0021872 6665.376667 377.2933333 573.4833333 0.006676292 0.117945365 0.077595978 1 1 1 0.25 dme-miR-1012-3p 8mer-A1 TTGACTAA 2R 21145710 21145717 + 2R_21145710_21145717_+ 0.553151878 0.560839457 0.556995667 0.005435954 Xbp1 FBtr0310044|FBtr0310045 21144863|21145459 21145750|21145750 2R + 21145608 21145741 3'utr Xbp1 FlyBase G17861.2 TAGCTGTAGGTTTCCATTTATATTTAACAATCTCTAACCACATAGGCTTATGATTACTCTTATATGTATGTATTGTGCTCAAAGAATTTGAAAAAAAAACATTTGACTAAAAAATATTCAAAATATAAACCAAA 429 21145709 0.846178406 28 409 2740 0.960784314 2.088136089 0.145098039 0.153846154 0.288235294 429 17 3 490 2R:21145608-21145741 8 Xbp1 FBtr0310044|FBtr0310045 21144863|21145459 21145750|21145750 TTGACTAA 8mer-A1 dme-miR-1012-3p 2R + 21145623 21145748 3'utr Xbp1 FlyBase G13598.2 ATTTATATTTAACAATCTCTAACCACATAGGCTTATGATTACTCTTATATGTATGTATTGTGCTCAAAGAATTTGAAAAAAAAACATTTGACTAAAAAATATTCAAAATATAAACCAAACCAAACA 254 21145709 0.967857902 28 241 1539 0.96 1.681241237 0.105714286 0.279527559 0.477142857 254 8 6 336 2R:21145623-21145748 8 183 828 FBgn0021872 6665.376667 377.2933333 573.4833333 0.027455313 0.485033749 0.31910256 1 1 1 0.25 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2R 21148537 21148542 - 2R_21148537_21148542_- 0.987251795 0.999999988 0.993625891 0.009014339 CG30389 FBtr0310423 21148263 21149340 2R - 21148461 21148587 3'utr CG30389 FlyBase G25406.1 TTTGCACGACCTCTGCCTCTTGCCCAACGATTCAATGGAATATTTTTGAAGTCTGCGCCCTTGATTTATTATCTCATTAAATTATTTTTGTTATAAAACCTTAAATGTATGCTATAATTTAGAACCT 52 21148521 0.824957765 14 45 466 0.867647059 1.293730757 0.25 0.269230769 0.441176471 52 7 2 59 2R:21148461-21148587 6 CG30389 FBtr0310423 21148263 21149340 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2R - 21148498 21148581 3'utr CG30389 FlyBase G19217.1 CGACCTCTGCCTCTTGCCCAACGATTCAATGGAATATTTTTGAAGTCTGCGCCCTTGATTTATTATCTCATTAAATTATTTTTG 33 21148535 0.801786664 18 32 303 0.98 1.69019608 0.22 0.393939394 0.6 33 1 0 49 2R:21148498-21148581 6 23 829 FBgn0050389 2516.626667 66.38 102.5 0.009139218 0.346489907 0.224390244 -21 -7 -14 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 21148649 21148654 - 2R_21148649_21148654_- 0.931683795 0.566604629 0.749144212 0.258149978 CG30389 FBtr0310423 21148263 21149340 2R - 21148613 21148705 3'utr CG30389 FlyBase G25407.1 AAGCCAAGGAAGTACCCCCCAAAATCCTATGTAAAATGTTTTCTATTTTTTACCAAACGCTGTGACAGAGTTGGACCAACCGAAGTGATGGCC 22 21148656 0.999947989 9 20 133 0.916666667 1.342422681 0 0.090909091 0.166666667 22 2 0 22 2R:21148613-21148705 6 CG30389 FBtr0310423 21148263 21149340 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 21148599 21148661 3'utr CG30389 FlyBase G19218.1 ATTTTTTACCAAACGCTGTGACAGAGTTGGACCAACCGAAGTGATGGCCATGATCTTGGGGAG 15 21148656 0.97120576 7 13 74 0.869565217 1.301029996 0 0.533333333 0.695652174 15 3 0 20 2R:21148599-21148661 6 13 830 FBgn0050389 2516.626667 66.38 102.5 0.005165645 0.195842121 0.126829268 2 2 2 0.25 dme-miR-304-5p 8mer-A1 TGAGATTA 2R 21149249 21149256 - 2R_21149249_21149256_- 0.620052926 0.621492139 0.620772532 0.001017668 CG30389 FBtr0310423|FBtr0071632|FBtr0071633|FBtr0330235 21148263|21148731|21148731|21148731 21149340|21149340|21149340|21149340 2R - 21149238 21149283 stop_codon CG30389 FlyBase G25409.1 TCGCACATGCATCTGCGACGACAAGTTTGAGATTATTATACTTTAT 65 21149257 0.780796593 3 63 489 0.958333333 1.537819095 0.347222222 0.107692308 0.194444444 65 2 1 69 2R:21149238-21149283 8 CG30389 FBtr0310423|FBtr0330235|FBtr0071633|FBtr0071632 21148263|21148731|21148731|21148731 21149340|21149340|21149340|21149340 TGAGATTA 8mer-A1 dme-miR-304-5p 2R - 21149238 21149284 stop_codon CG30389 FlyBase G19221.1 CTCGCACATGCATCTGCGACGACAAGTTTGAGATTATTATACTTTAT 34 21149257 0.769324624 4 33 253 0.981132075 1.716003344 0.471698113 0.411764706 0.622641509 34 1 0 52 2R:21149238-21149284 8 49.5 831 FBgn0050389 2516.626667 66.38 102.5 0.019669187 0.745706538 0.482926829 1 1 1 0.25 dme-miR-304-5p 8mer-A1 TGAGATTA 2R 21162115 21162122 - 2R_21162115_21162122_- 0.510020264 0.528299233 0.519159748 0.012925134 CG4266 FBtr0342871|FBtr0113100|FBtr0310422|FBtr0071629 21161711|21161711|21161711|21161711 21162255|21162255|21164953|21162255 2R - 21162065 21162160 3'utr CG4266 FlyBase G25426.1 GTAACTCCATACATGCGAACATTTTACCGTTTTTAAATTGAGATTACGTAGCATTTTTGACGAGGGGGGTGGGGGTTGAACCGGACGCTTTTAAAA 23 21162123 0.986398093 6 22 182 0.961538462 1.397940009 0.192307692 0.130434783 0.230769231 23 1 0 25 2R:21162065-21162160 8 CG4266 FBtr0310422|FBtr0071629|FBtr0342871|FBtr0113100 21161711|21161711|21161711|21161711 21164953|21162255|21162255|21162255 TGAGATTA 8mer-A1 dme-miR-304-5p 2R - 21162106 21162140 3'utr CG4266 FlyBase G19232.1 ATTTTACCGTTTTTAAATTGAGATTACGTAGCATT 6 21162123 0.819123942 2 6 61 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 2R:21162106-21162140 8 10.5 832 FBgn0034598 911.3333333 25.02 38.24333333 0.01152158 0.419664269 0.274557657 1 1 1 0.25 dme-miR-33-5p 6mer2-7 AATGCA 2R 21169989 21169994 + 2R_21169989_21169994_+ 0.912668364 0.877679506 0.895173935 0.024740888 hng1 FBtr0071575 21169943 21170010 2R + 21169969 21170006 3'utr hng1 FlyBase G17876.1 AGGTTTTAACATAGTTTTTTAATGCAGTACAAATATAC 23 21169991 0.821629737 6 20 211 0.807692308 1.322219295 0 0.130434783 0.230769231 23 5 0 21 2R:21169969-21170006 6 hng1 FBtr0071575 21169943 21170010 AATGCA 6mer2-7 dme-miR-33-5p 2R + 21169969 21170007 3'utr hng1 FlyBase G13608.1 AGGTTTTAACATAGTTTTTTAATGCAGTACAAATATACA 18 21169991 0.833590818 3 17 178 0.952380952 1.301029996 0.142857143 0.111111111 0.238095238 18 1 0 20 2R:21169969-21170007 6 19 833 FBgn0034599 146 16.78333333 25.62333333 0.130136986 1.132075472 0.741511643 -2 -2 -2 0.25 dme-miR-317-5p 6mer3-8 GTATCC 2R 21174398 21174403 + 2R_21174398_21174403_+ 0.87441965 0.775540765 0.824980207 0.06991787 Xpd FBtr0071576 21174077 21174504 2R + 21174380 21174407 3'utr Xpd FlyBase G17889.1 GTATCTATACCTGTGATTGTATCCGGAT 11 21174397 0.694988051 5 11 95 1 1.079181246 0 0.090909091 0.166666667 11 0 0 12 2R:21174380-21174407 6 Xpd FBtr0071576 21174077 21174504 GTATCC 6mer3-8 dme-miR-317-5p 2R + 21174354 21174402 3'utr Xpd FlyBase G13615.1 CGAGTTTTGCTCTTGCAGTTGTATTTGTATCTATACCTGTGATTGTATC 12 21174397 0.987362668 5 12 104 1 1.414973348 0 0.583333333 0.807692308 12 0 0 26 2R:21174354-21174402 5 11 834 FBgn0261850 258.9866667 11.14666667 16.99 0.042473229 0.986842105 0.64743967 1 1 1 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 2R 21192178 21192184 + 2R_21192178_21192184_+ 0.469619222 0.491008212 0.480313717 0.015124307 tud FBtr0342870|FBtr0071582 21192125|21192125 21192913|21192913 2R + 21192066 21192379 stop_codon tud FlyBase G17941.1 TGTCGTACGACTCTTCTACCAGAGCAAGAACATCAGCGAGAAGCTTCAGGAATGTCAGTGATCACCCCGTTGTACAGTCAGATCGGACTCATATGTGCTCCATGCAGGAGATTGTGATTGGGTTGGCTAAAAACATGCGATGTATTATCCATTAAGTTGAACGAGTTAAACTTATTCAAAGGGAAGAGGAGGACACCACACGATTAGCCAAGATGCTTCATTGACTTTTCATGGAAAACCAAAATGAAAGCAATTTTTAATATTAATTAAAGAATCAATACGGAATGCAAAACATTATCACCAAAAACACAACA 474 21192184 0.980054934 35 459 3211 0.970017637 1.837272703 0.276895944 0.160337553 0.298059965 474 10 7 550 2R:21192066-21192379 7 tud FBtr0342870|FBtr0071582 21192125|21192125 21192913|21192913 TGTGATT 7mer-m1 dme-miR-308-3p 2R + 21192096 21192227 stop_codon tud FlyBase G13660.1 CATCAGCGAGAAGCTTCAGGAATGTCAGTGATCACCCCGTTGTACAGTCAGATCGGACTCATATGTGCTCCATGCAGGAGATTGTGATTGGGTTGGCTAAAAACATGCGATGTATTATCCATTAAGTTGAAC 275 21192184 0.983545622 23 256 1974 0.932400932 1.397940009 0.282051282 0.392727273 0.610722611 275 14 15 400 2R:21192096-21192227 7 293 835 FBgn0003891 6434.526667 87.37 133.74 0.045535595 3.353553851 2.190818005 -6 -6 -6 0.25 dme-miR-8-3p 8mer-A1 CAGTATTA 2R 21309176 21309183 + 2R_21309176_21309183_+ 0.556973663 0.667875182 0.612424422 0.078419203 CG42672 FBtr0302702|FBtr0302703|FBtr0302704|FBtr0344188 21308996|21308996|21308996|21308996 21309434|21309434|21309434|21309434 2R + 21309134 21309187 3'utr CG42672 FlyBase G17967.1 CGATTTCTCGTATTACTTGTTTTATTCTTGCTTTGTCATGGTCAGTATTATTGA 15 21309175 0.990778344 6 14 150 0.947368421 0.954242509 0.368421053 0.266666667 0.421052632 15 0 1 18 2R:21309134-21309187 8 CG42672 FBtr0344188|FBtr0302704|FBtr0302703|FBtr0302702 21308996|21308996|21308996|21308996 21309434|21309434|21309434|21309434 CAGTATTA 8mer-A1 dme-miR-8-3p 2R + 21309127 21309188 3'utr CG42672 FlyBase G13682.1 CGAAACACGATTTCTCGTATTACTTGTTTTATTCTTGCTTTGTCATGGTCAGTATTATTGAC 16 21309175 0.993024053 7 14 169 0.826086957 1.278753601 0.347826087 0.4375 0.608695652 16 4 0 19 2R:21309127-21309188 8 14 836 FBgn0261554 652.3633333 14.67 22.79 0.021460434 0.954328562 0.61430452 1 1 1 0.25 dme-miR-12-5p 8mer-A1 AATACTCA 2R 21319412 21319419 + 2R_21319412_21319419_+ 0.619923 0.536509157 0.578216079 0.058982464 CG9485 FBtr0310327|FBtr0071599|FBtr0071601|FBtr0300395|FBtr0300394|FBtr0071600 21319401|21319401|21319401|21319401|21319401|21319401 21319569|21319569|21319569|21319569|21319569|21319569 2R + 21319403 21319445 3'utr CG9485 FlyBase G17973.1 ACCACCGTAAATACTCATATTCAAACCTGTTAGTTGCTACCAA 17 21319432 0.921745471 9 16 121 0.952380952 1.301029996 0.19047619 0.176470588 0.333333333 17 1 0 20 2R:21319403-21319445 8 CG9485 FBtr0300394|FBtr0071600|FBtr0071601|FBtr0300395|FBtr0310327|FBtr0071599 21319401|21319401|21319401|21319401|21319401|21319401 21319569|21319569|21319569|21319569|21319569|21319569 AATACTCA 8mer-A1 dme-miR-12-5p 2R + 21319402 21319444 3'utr CG9485 FlyBase G13685.1 AACCACCGTAAATACTCATATTCAAACCTGTTAGTTGCTACCA 7 21319433 0.983928252 5 7 53 1 0.903089987 0 0.142857143 0.25 7 0 0 8 2R:21319402-21319444 8 9.5 837 FBgn0034618 1036.04 24.30333333 37.13 0.00916953 0.390892882 0.255857797 -20 -21 -20.5 0.25 dme-miR-14-3p 6mer2-7 AGACTG 2R 21336209 21336214 + 2R_21336209_21336214_+ 0.999700803 0.9998402 0.999770501 9.86E-05 dom FBtr0071604 21336064 21336986 2R + 21335998 21336277 stop_codon dom FlyBase G18016.1 CTAGCTCATCAGCAGCAGTCAGTGGTGTTTCGGGAGGAAATGCCTCCTCGAGCGGAACAGCCAGGTGATGATGTTCACTATCATACCTCAGTCAGTATTATCAGCTGTGTGTGTTGTGTGCGTTTTAGTGGGCGACTAATTATCTGTGGGGAGACGGGTCCTTCCCCGGCTGTTACTGCTGCCAGGCGACTGATGCATAATGAGTATTTATAGACTGTAACAAGTTTCCTTCTATCGTATGAGATAAGTTAGTTAGGCGCCGGAACCCACGCTAGAATCT 341 21336207 0.983059955 42 324 2466 0.955607477 2.310693312 0.119158879 0.211143695 0.371495327 341 18 1 409 2R:21335998-21336277 6 dom FBtr0071604 21336064 21336986 AGACTG 6mer2-7 dme-miR-14-3p 2R + 21336123 21336299 3'utr dom FlyBase G13724.2 TAGTGGGCGACTAATTATCTGTGGGGAGACGGGTCCTTCCCCGGCTGTTACTGCTGCCAGGCGACTGATGCATAATGAGTATTTATAGACTGTAACAAGTTTCCTTCTATCGTATGAGATAAGTTAGTTAGGCGCCGGAACCCACGCTAGAATCTAGAATAACAAATTAAACTTCAT 176 21336207 0.888485132 26 162 1215 0.922509225 1.795880017 0.084870849 0.392045455 0.605166052 176 18 3 250 2R:21336123-21336299 6 193 838 FBgn0020306 6085.363333 78.23 120.3133333 0.031715444 2.467084239 1.604144733 2 2 2 0.25 dme-miR-1012-3p 8mer-A1 TTGACTAA 2R 21336851 21336858 + 2R_21336851_21336858_+ 0.618992226 0.3665442 0.492768213 0.178507693 dom FBtr0071604 21336064 21336986 2R + 21336814 21336877 3'utr dom FlyBase G18019.1 AATGGAACATTAACAATCTAAAGACTATGAGCATAGATTGACTAACCAATAAGACACAGAACTC 29 21336842 0.692505155 5 25 139 0.921052632 1.544068044 0.315789474 0.310344828 0.473684211 29 3 0 35 2R:21336814-21336877 8 dom FBtr0071604 21336064 21336986 TTGACTAA 8mer-A1 dme-miR-1012-3p 2R + 21336791 21336877 3'utr dom FlyBase G13725.1 AATTTATTTTGTACTCTAACCTAAATGGAACATTAACAATCTAAAGACTATGAGCATAGATTGACTAACCAATAAGACACAGAACTC 24 21336841 0.965206843 6 22 124 0.942857143 1.51851394 0.142857143 0.333333333 0.542857143 24 2 0 33 2R:21336791-21336877 8 16 839 FBgn0020306 6085.363333 78.23 120.3133333 0.00262926 0.204525118 0.132986092 9 10 9.5 0.25 dme-bantam-3p 8mer-A1 TGATCTCA 2R 21341389 21341396 + 2R_21341389_21341396_+ 0.576328727 0.593084502 0.584706614 0.01184814 dom FBtr0342890|FBtr0071603 21341126|21341126 21341847|21341847 2R + 21341362 21341655 stop_codon dom FlyBase G18032.2 CAGTCAATCAGCCCGTCATTGCTAAATTGATCTCAATTTCTGTCGATTGGTTTTGCAGCCATGAGCGATCTAACTGTTCTGGAGGATTGTGAGCTCAAGGTGAAACGCTGAAGATTACAACGATGATCGCTTCAATCAGCTCAAGGCATGGAAGCCGTATTACTAATTTTACTGATCCTTAGATATAGCACCTTAGCTTAAGTGAAATTTCATTGTATCTATTCATATTACGAGAATAGTTTTAAGGAAGTGTAGGTGGAGTGCCTAGTGTGTAGGCTAACTGCTTTAAATTCA 265 21341388 0.877750261 45 254 2351 0.957928803 1.994170456 0.090614887 0.15530303 0.278317152 264 11 2 296 2R:21341362-21341655 8 dom FBtr0071603|FBtr0342890 21341126|21341126 21341847|21341847 TGATCTCA 8mer-A1 dme-bantam-3p 2R + 21341348 21341497 stop_codon dom FlyBase G13736.1 ATCAGTCAGTCAGTCAGTCAATCAGCCCGTCATTGCTAAATTGATCTCAATTTCTGTCGATTGGTTTTGCAGCCATGAGCGATCTAACTGTTCTGGAGGATTGTGAGCTCAAGGTGAAACGCTGAAGATTACAACGATGATCGCTTCAAT 173 21341388 0.989425342 18 160 1550 0.921259843 2.369215857 0.062992126 0.323699422 0.539370079 173 20 0 234 2R:21341348-21341497 8 179 840 FBgn0020306 6085.363333 78.23 120.3133333 0.029414842 2.28812476 1.487781903 1 1 1 0.25 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 2R 21341789 21341794 + 2R_21341789_21341794_+ 0.999905135 0.950511164 0.975208149 0.034926762 dom FBtr0342890|FBtr0071602|FBtr0071603 21341126|21341424|21341126 21341847|21341847|21341847 2R + 21341691 21341799 3'utr dom FlyBase G18033.1 CTATTCCCGTAGAGCAGTATGTACATTGGTAAATCTAATTCAGATCTATCAGATACTACATAAACACACCTAATATGTAGCTATAACTAAATGTCCTTTCTAGTTGTAT 19 21341787 0.986855854 9 17 154 0.913043478 1.322219295 0.173913043 0.210526316 0.347826087 19 2 0 21 2R:21341691-21341799 6 dom FBtr0071603|FBtr0342890|FBtr0071602 21341126|21341126|21341424 21341847|21341847|21341847 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 21341698 21341799 3'utr dom FlyBase G13738.1 CGTAGAGCAGTATGTACATTGGTAAATCTAATTCAGATCTATCAGATACTACATAAACACACCTAATATGTAGCTATAACTAAATGTCCTTTCTAGTTGTAT 15 21341788 0.988854569 8 14 131 0.944444444 1.230448921 0.333333333 0.2 0.333333333 15 1 0 17 2R:21341698-21341799 6 7 841 FBgn0020306 6085.363333 78.23 120.3133333 0.001150301 0.089479739 0.058181415 2 1 1.5 0.25 dme-miR-1002-5p 6mer3-8 CTACTT 2R 21355075 21355080 - 2R_21355075_21355080_- 0.873756941 0.873381772 0.873569356 0.000265236 cv-2 FBtr0071610 21355013 21356005 2R - 21355048 21355096 3'utr cv-2 FlyBase G25470.1 AATAACTCTTTATATACTACTTGTATGGCTGGAACTGTAAGTTTACGAT 5 21355082 0.987447398 4 5 50 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2R:21355048-21355096 6 cv-2 FBtr0071610 21355013 21356005 CTACTT 6mer3-8 dme-miR-1002-5p 2R - 21355058 21355082 3'utr cv-2 FlyBase G19262.1 TACTACTTGTATGGCTGGAACTGTA 5 21355075 0.634511094 2 3 34 0.555555556 0.698970004 0 0.6 0.777777778 5 4 0 5 2R:21355058-21355082 6 5 842 FBgn0000395 482.9966667 13.41666667 20.45666667 0.010352038 0.372670807 0.244419097 2 -5 -1.5 0.25 dme-miR-980-5p 7mer-m1 AAAAACT 2R 21355529 21355535 - 2R_21355529_21355535_- 0.579916255 0.639728206 0.60982223 0.0422934 cv-2 FBtr0071610 21355013 21356005 2R - 21355505 21355638 3'utr cv-2 FlyBase G25474.1 TTATCCGGAGATCCTGTTGTTGCTTGTGTGCCTGTTTTGTATTTGTATTTGTATTTGTACTACTATATGTGTGTTTCGTCGCTGCGCTAAACTAAACTGATCTAAAAACTATAACTATAATTATAACTATAACT 52 21355541 0.849850421 13 46 396 0.861538462 1.447158031 0.307692308 0.192307692 0.353846154 52 8 1 56 2R:21355505-21355638 7 cv-2 FBtr0071610 21355013 21356005 AAAAACT 7mer-m1 dme-miR-980-5p 2R - 21355522 21355638 3'utr cv-2 FlyBase G19265.1 TTATCCGGAGATCCTGTTGTTGCTTGTGTGCCTGTTTTGTATTTGTATTTGTATTTGTACTACTATATGTGTGTTTCGTCGCTGCGCTAAACTAAACTGATCTAAAAACTATAACTA 34 21355541 0.831257545 13 33 259 0.97826087 1.653212514 0.347826087 0.323529412 0.5 34 1 0 45 2R:21355522-21355638 7 26 843 FBgn0000395 482.9966667 13.41666667 20.45666667 0.053830599 1.937888199 1.270979306 6 6 6 0.25 dme-miR-970-3p 7mer-A1 CTTATGA 2R 21383486 21383492 - 2R_21383486_21383492_- 0.662950529 0.660188691 0.66156961 0.001952888 CG10795 FBtr0071609 21383225 21383560 2R - 21383447 21383507 3'utr CG10795 FlyBase G25482.1 ATACCTTAAGTACGGCTTATGACACTAACGATAAGCAACGACTGCGGATCCGTTCCGATCG 29 21383507 0.866713292 7 10 112 0.766666667 1.06069784 0.2 0.153846154 0.266666667 26 6 1 23 2R:21383447-21383507 7 CG10795 FBtr0071609 21383225 21383560 CTTATGA 7mer-A1 dme-miR-970-3p 2R - 21383448 21383523 3'utr CG10795 FlyBase G19270.1 ACTTTAAGTCCTTGTTATACCTTAAGTACGGCTTATGACACTAACGATAAGCAACGACTGCGGATCCGTTCCGATC 14 21383507 0.791009166 10 11 86 0.772727273 0.62838893 0.181818182 0.5 0.681818182 14 2 3 17 2R:21383448-21383523 7 7 844 FBgn0034626 77 8.706666667 13.28666667 0.090909091 0.803981623 0.526843954 15 15 15 0.25 dme-miR-999-3p 7mer-m8 AGTTAAC 2R 21486857 21486863 + 2R_21486857_21486863_+ 0.674513438 0.674089763 0.6743016 0.00029953 Sara FBtr0071641 21486704 21487107 2R + 21486826 21486905 3'utr Sara FlyBase G18067.1 ATGAGGACATGTTGGTATTGTTGGATGGCTCAGTTAACTGTGTATATATTTAAGTAGCTCATCGTTTGGTTTTTGTCTAT 33 21486860 0.648207506 17 30 342 0.918918919 1.531478917 0.162162162 0.121212121 0.216216216 33 3 0 34 2R:21486826-21486905 7 Sara FBtr0071641 21486704 21487107 AGTTAAC 7mer-m8 dme-miR-999-3p 2R + 21486808 21486909 3'utr Sara FlyBase G13761.1 GAGTCCATGGGGCAAGAAATGAGGACATGTTGGTATTGTTGGATGGCTCAGTTAACTGTGTATATATTTAAGTAGCTCATCGTTTGGTTTTTGTCTATACAT 15 21486837 0.988138844 11 15 141 1 1.361727836 0.217391304 0.4 0.608695652 15 0 0 23 2R:21486808-21486909 7 10.5 845 FBgn0026369 1340.356667 34.97 53.53333333 0.007833736 0.300257363 0.196139477 -3 20 8.5 0.25 dme-miR-11-3p 7mer-m1 TGTGATG 2R 21487034 21487040 + 2R_21487034_21487040_+ 0.527523099 0.535347553 0.531435326 0.005532757 Sara FBtr0071641 21486704 21487107 2R + 21486991 21487082 3'utr Sara FlyBase G18069.1 AAGTAAAACGTATCTAAGAAACCTAAATATATATATATTTGTATGTGATGTTCTTTAATATGCTTTACACATTTACCACTCGAGTATATATG 26 21487031 0.994925881 9 22 300 0.9 0.954242509 0.066666667 0.153846154 0.266666667 26 1 2 27 2R:21486991-21487082 7 Sara FBtr0071641 21486704 21487107 TGTGATG 7mer-m1 dme-miR-11-3p 2R + 21487007 21487083 3'utr Sara FlyBase G13762.1 AGAAACCTAAATATATATATATTTGTATGTGATGTTCTTTAATATGCTTTACACATTTACCACTCGAGTATATATGA 18 21487030 0.992858473 9 16 210 0.821428571 0.884606581 0.178571429 0.388888889 0.607142857 18 3 2 23 2R:21487007-21487083 7 18 846 FBgn0026369 1340.356667 34.97 53.53333333 0.013429261 0.514726909 0.336239103 3 4 3.5 0.25 dme-miR-92b-3p 6mer3-8 GTGCAA 2R 21512684 21512689 + 2R_21512684_21512689_+ 0.946839242 0.92920892 0.938024081 0.012466505 MESK2 FBtr0089710|FBtr0089703 21512447|21512447 21512725|21512725 2R + 21512570 21512706 3'utr MESK2 FlyBase G18084.1 ACGCACACACAAAGTACACAAACGTCCCTGACCCAACCTGATTTTAGTCTAAACGAAAATCTTTGAGAATCAAAAGCTTTTTGAGATGCATTGAAACGAAACCAAAAATCTATTGTGCAAAATTTTATATTTACAAA 125 21512682 0.957945587 18 121 707 0.972413793 2.149219113 0.034482759 0.128 0.248275862 125 4 0 141 2R:21512570-21512706 6 MESK2 FBtr0089703|FBtr0089710 21512447|21512447 21512725|21512725 GTGCAA 6mer3-8 dme-miR-92b-3p 2R + 21512575 21512706 3'utr MESK2 FlyBase G13772.1 CACACAAAGTACACAAACGTCCCTGACCCAACCTGATTTTAGTCTAAACGAAAATCTTTGAGAATCAAAAGCTTTTTGAGATGCATTGAAACGAAACCAAAAATCTATTGTGCAAAATTTTATATTTACAAA 90 21512682 0.952035687 13 89 496 0.992424242 2.117271296 0.068181818 0.344444444 0.553030303 90 1 0 131 2R:21512575-21512706 6 49 847 FBgn0043070 584.3833333 29.10666667 44.48666667 0.083849072 1.683463124 1.101453619 2 2 2 0.25 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2R 21605708 21605713 - 2R_21605708_21605713_- 0.944680807 0.947696682 0.946188745 0.002132563 CG10433 FBtr0071690|FBtr0344882|FBtr0071691 21605674|21605674|21605674 21606071|21606071|21606325 2R - 21605679 21605797 3'utr CG10433 FlyBase G25520.1 TTAACTATATGTATATTAATTATATTGTACGAATAATTTTGTATGACATCTTAAGAGCCCCAAATCTACCCACAATGTGAAATATTTGACTGCTTCCAATAAATGCATTGTAAATATTT 53 21605712 0.983568705 15 51 406 0.942028986 1.812913357 0.507246377 0.264150943 0.434782609 53 4 0 65 2R:21605679-21605797 6 CG10433 FBtr0071691|FBtr0344882|FBtr0071690 21605674|21605674|21605674 21606325|21606071|21606071 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2R - 21605676 21605759 3'utr CG10433 FlyBase G19305.1 TTGTATGACATCTTAAGAGCCCCAAATCTACCCACAATGTGAAATATTTGACTGCTTCCAATAAATGCATTGTAAATATTTTCC 44 21605704 0.831555834 13 42 297 0.970149254 1.511883361 0.447761194 0.363636364 0.582089552 44 1 1 65 2R:21605676-21605759 6 39 848 FBgn0034638 6526.64 846.7433333 1285.906667 0.00597551 0.046058821 0.030328795 -1 -9 -5 0.25 dme-miR-92b-3p 6mer2-7 TGCAAT 2R 21614881 21614886 - 2R_21614881_21614886_- 0.980810237 0.876681205 0.928745721 0.073630322 CG18870 FBtr0071688|FBtr0345664 21614761|21613843 21615593|21615593 2R - 21614852 21614965 3'utr CG18870 FlyBase G25531.1 TCAATTTCGAGTATAAGATGTAGGCGCATACGCTCACAAGATAATGTACGAACTACAGTATTTACTCCACACATGTAACTGCAATGTAACTGAAAGTTCGGGCTAGTGGTCAGT 21 21614881 0.969143481 8 21 115 1 1.380211242 0.125 0.095238095 0.208333333 21 0 0 24 2R:21614852-21614965 6 CG18870 FBtr0345664|FBtr0071688 21613843|21614761 21615593|21615593 TGCAAT 6mer2-7 dme-miR-92b-3p 2R - 21614856 21614976 3'utr CG18870 FlyBase G19310.1 GTGTCAATTGTTCAATTTCGAGTATAAGATGTAGGCGCATACGCTCACAAGATAATGTACGAACTACAGTATTTACTCCACACATGTAACTGCAATGTAACTGAAAGTTCGGGCTAGTGGT 22 21614881 0.968206536 9 20 120 0.9 1.431363764 0.2 0.272727273 0.466666667 22 3 0 27 2R:21614856-21614976 6 12.5 849 FBgn0042180 173 9.316666667 14.31333333 0.072254335 1.341681574 0.873311598 -5 -5 -5 0.25 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG 2R 21615068 21615074 - 2R_21615068_21615074_- 0.701405918 0.701533597 0.701469757 9.03E-05 CG18870 FBtr0071688|FBtr0345664 21614761|21613843 21615593|21615593 2R - 21615043 21615102 3'utr CG18870 FlyBase G25533.1 AAGACTGGGCCGAGCATTCCACATAGTTGTACCTGTTTCTGTACTGCATAGATATGTATA 155 21615075 0.744084706 10 148 1397 0.948186528 2.26245109 0.062176166 0.2 0.357512953 155 10 0 183 2R:21615043-21615102 7 CG18870 FBtr0345664|FBtr0071688 21613843|21614761 21615593|21615593 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" 2R - 21615044 21615102 3'utr CG18870 FlyBase G19312.1 AAGACTGGGCCGAGCATTCCACATAGTTGTACCTGTTTCTGTACTGCATAGATATGTAT 113 21615075 0.901522729 8 109 993 0.957575758 1.897627091 0.096969697 0.336283186 0.545454545 113 6 1 158 2R:21615044-21615102 7 129.5 850 FBgn0042180 173 9.316666667 14.31333333 0.748554913 13.89982111 9.047508151 1 1 1 0.25 dme-miR-92b-3p 6mer2-7 TGCAAT 2R 21619359 21619364 - 2R_21619359_21619364_- 0.917158118 0.705177334 0.811167726 0.149893061 PTP-ER FBtr0071686 21619319 21620046 2R - 21619330 21619406 3'utr PTP-ER FlyBase G25547.1 AAGTAAAATGGAAACCCATAAATGAACATGTATTTAAGTTTATGCAATGGAACTAGTCAAATAAAAATTAGAAACAT 65 21619359 0.977130468 10 55 356 0.875 1.367976785 0.1875 0.184615385 0.3375 65 8 2 70 2R:21619330-21619406 6 PTP-ER FBtr0071686 21619319 21620046 TGCAAT 6mer2-7 dme-miR-92b-3p 2R - 21619332 21619386 3'utr PTP-ER FlyBase G19319.1 AATGAACATGTATTTAAGTTTATGCAATGGAACTAGTCAAATAAAAATTAGAAAC 37 21619359 0.970019958 6 31 179 0.890909091 1.69019608 0.181818182 0.324324324 0.545454545 37 6 0 49 2R:21619332-21619386 6 46 851 FBgn0016641 329.97 7.83 11.97333333 0.139406613 5.874840358 3.841870824 -5 -5 -5 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 21619648 21619653 - 2R_21619648_21619653_- 0.999833078 0.992790638 0.996311858 0.0049798 PTP-ER FBtr0071686 21619319 21620046 2R - 21619601 21619677 3'utr PTP-ER FlyBase G25548.2 AATTATTATACCCTACCTTACCTTACCAAAACCATACCTTACCATAAAGATGCGCATCTATATATGACTCGCGACGT 26 21619627 0.861228897 10 22 159 0.8 0.970036777 0 0.346153846 0.514285714 26 5 2 28 2R:21619601-21619677 6 PTP-ER FBtr0071686 21619319 21620046 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 21619612 21619673 3'utr PTP-ER FlyBase G19320.1 ATTATACCCTACCTTACCTTACCAAAACCATACCTTACCATAAAGATGCGCATCTATATATG 17 21619660 0.796097938 7 16 101 0.952380952 1.301029996 0 0.235294118 0.380952381 17 1 0 20 2R:21619612-21619673 6 12 852 FBgn0016641 329.97 7.83 11.97333333 0.036366942 1.53256705 1.002227171 -26 7 -9.5 0.25 dme-miR-305-3p 7mer-A1 TGTGCCA 2R 21638217 21638223 + 2R_21638217_21638223_+ 0.592583146 0.558867917 0.575725531 0.023840247 CG10321 FBtr0071660|FBtr0330228 21637910|21637970 21638399|21638399 2R + 21638138 21638235 3'utr CG10321 FlyBase G18127.1 AGCAGATACGAAACTTTAGGTAGGCAGATCGAGGCGGATCCTCACATCCAAACGCTTGGGGCATAAATCCTGCGTGGACTGTGCCAGTTTTTGTTTTT 71 21638219 0.882143491 10 69 374 0.974683544 1.58546073 0.17721519 0.098591549 0.189873418 71 1 1 77 2R:21638138-21638235 7 CG10321 FBtr0330228|FBtr0071660 21637970|21637910 21638399|21638399 TGTGCCA 7mer-A1 dme-miR-305-3p 2R + 21638131 21638236 3'utr CG10321 FlyBase G13803.1 TTTTGTAAGCAGATACGAAACTTTAGGTAGGCAGATCGAGGCGGATCCTCACATCCAAACGCTTGGGGCATAAATCCTGCGTGGACTGTGCCAGTTTTTGTTTTTA 54 21638219 0.764653944 12 52 272 0.952380952 1.425968732 0.30952381 0.388888889 0.607142857 54 2 2 80 2R:21638131-21638236 7 43.5 853 FBgn0034643 611.73 22.34 34.24 0.071109803 1.947179946 1.270443925 -2 -2 -2 0.25 dme-miR-14-3p 6mer2-7 AGACTG 2R 21638281 21638286 + 2R_21638281_21638286_+ 0.772400503 0.73094947 0.751674986 0.029310283 CG10321 FBtr0071660|FBtr0330228 21637910|21637970 21638399|21638399 2R + 21638240 21638307 3'utr CG10321 FlyBase G18128.1 TTATTACCCTACTATTATTATTTTGTTTTCCCGGGGAATACAGACTGGCATTTTAGGCTAAACGTATT 104 21638278 0.986806351 7 100 705 0.965517241 2.049218023 0.086206897 0.105769231 0.198275862 104 4 0 112 2R:21638240-21638307 6 CG10321 FBtr0330228|FBtr0071660 21637970|21637910 21638399|21638399 AGACTG 6mer2-7 dme-miR-14-3p 2R + 21638240 21638341 3'utr CG10321 FlyBase G13804.1 TTATTACCCTACTATTATTATTTTGTTTTCCCGGGGAATACAGACTGGCATTTTAGGCTAAACGTATTTTGGCGTTGGGTTTTCATTGTTGGGCTTTGAAAT 62 21638278 0.980888622 9 58 407 0.943820225 1.924279286 0.134831461 0.370967742 0.561797753 62 5 0 84 2R:21638240-21638341 6 78 854 FBgn0034643 611.73 22.34 34.24 0.127507234 3.491495076 2.278037383 3 3 3 0.25 dme-miR-33-5p 8mer-A1 CAATGCAA 2R 21657623 21657630 + 2R_21657623_21657630_+ 0.498475198 0.63292568 0.565700439 0.09507086 CG10082 FBtr0071661 21657072 21657935 2R + 21657598 21657679 3'utr CG10082 FlyBase G18156.1 GATTTTATACCTAGCCATTACAATTCAATGCAAAATGACAAAGCGATAGAGCGTAATCATCAGTATTTCGTTGTATGTATCT 28 21657622 0.859954774 5 28 207 1 1.491361694 0.612903226 0.107142857 0.193548387 28 0 0 31 2R:21657598-21657679 8 CG10082 FBtr0071661 21657072 21657935 CAATGCAA 8mer-A1 dme-miR-33-5p 2R + 21657608 21657670 3'utr CG10082 FlyBase G13821.1 CTAGCCATTACAATTCAATGCAAAATGACAAAGCGATAGAGCGTAATCATCAGTATTTCGTTG 23 21657622 0.800931886 3 22 138 0.939393939 1.491361694 0.575757576 0.304347826 0.515151515 23 2 0 31 2R:21657608-21657670 8 14 855 FBgn0034644 417.2733333 12.82666667 19.61 0.03355115 1.091476091 0.713921469 1 1 1 0.25 dme-miR-11-3p 7mer-m1 TGTGATG 2R 21692013 21692019 + 2R_21692013_21692019_+ 0.505583251 0.502507188 0.50404522 0.002175131 CG42496 FBtr0300625|FBtr0342958 21691979|21691979 21692764|21692764 2R + 21691973 21692044 start_codon CG42496 FlyBase G18183.1 AGCAATAGCCGGCATTGTGAGCCATGAAACCCGAACGTAATGTGATGATAGCGGCCACCGGAAGTGTGGCCA 45 21692021 0.972963913 9 33 193 0.759259259 1.010723865 0.518518519 0.177777778 0.314814815 45 10 3 41 2R:21691973-21692044 7 CG42496 FBtr0342958|FBtr0300625 21691979|21691979 21692764|21692764 TGTGATG 7mer-m1 dme-miR-11-3p 2R + 21691977 21692058 start_codon CG42496 FlyBase G13838.1 ATAGCCGGCATTGTGAGCCATGAAACCCGAACGTAATGTGATGATAGCGGCCACCGGAAGTGTGGCCACCATTAAGTTAGCC 36 21692021 0.955417194 5 31 148 0.928571429 1.414973348 0.5 0.388888889 0.607142857 36 3 1 52 2R:21691977-21692058 7 35 856 FBgn0260222 113.5 13.05 20.08333333 0.308370044 2.681992337 1.742738589 -8 -8 -8 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 21716636 21716643 + 2R_21716636_21716643_+ 0.460246149 0.474057223 0.467151686 0.009765922 HmgD FBtr0071709|FBtr0071708 21715879|21715879 21716727|21716727 2R + 21716482 21716689 3'utr HmgD FlyBase G18195.1 ACGAAAAACAATACACACACCGCAAATGAATCGAACGAAATTTCGCTCAGGTCTTTTCGTCATTTTGCATTAAACTTAATGTTTAACGTCTTGTTAGCTAAAGATGTATAGCAGAAGAGGAAGTCGGAAGTTAGATGAGACAAGCAGATGTAATTGCATTTAATCGGTAGTTTTAATTGATTACTATACGTACTATTTAAAGAGAAAA 561 21716635 0.989745973 24 546 5364 0.975688817 2.001445241 0.235008104 0.08912656 0.171799028 561 10 5 602 2R:21716482-21716689 8 HmgD FBtr0071709|FBtr0071708 21715879|21715879 21716727|21716727 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 21716590 21716663 3'utr HmgD FlyBase G13848.1 TAGCAGAAGAGGAAGTCGGAAGTTAGATGAGACAAGCAGATGTAATTGCATTTAATCGGTAGTTTTAATTGATT 304 21716635 0.975189149 13 291 2786 0.958963283 2.170261715 0.306695464 0.368421053 0.585313175 304 17 2 444 2R:21716590-21716663 8 394 857 FBgn0004362 7189.043333 869.6 1331.753333 0.054805623 0.453081877 0.295850583 1 1 1 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 2R 21717304 21717309 - 2R_21717304_21717309_- 0.990402475 0.86732487 0.928863673 0.087029006 Tango11 FBtr0342965|FBtr0071747|FBtr0071746 21716778|21716778|21716778 21717417|21717417|21717417 2R - 21717235 21717384 3'utr Tango11 FlyBase G25606.1 TCTGCGCTGGGTGCCAAGACAACCACCTTGCTATGGACACCCTTTTTGGAACAGCTTCTTTCGTTTCTTGACTTTTGTGTTTCTTTTGTGGAAAGGCTCTGAGAGAGACTTTGTTTTTTGTTTGCCATAATTTTGTAGACTAAGCTCCGT 55 21717310 0.926836458 21 54 503 0.984126984 1.491361694 0.19047619 0.127272727 0.238095238 55 0 1 62 2R:21717235-21717384 6 Tango11 FBtr0071746|FBtr0071747|FBtr0342965 21716778|21716778|21716778 21717417|21717417|21717417 TGTGTT 6mer3-8 dme-miR-317-3p 2R - 21717239 21717335 3'utr Tango11 FlyBase G19365.1 AACAGCTTCTTTCGTTTCTTGACTTTTGTGTTTCTTTTGTGGAAAGGCTCTGAGAGAGACTTTGTTTTTTGTTTGCCATAATTTTGTAGACTAAGCT 40 21717310 0.768185878 11 37 411 0.952380952 1.77815125 0.26984127 0.4 0.619047619 40 3 0 60 2R:21717239-21717335 6 19.5 858 FBgn0050404 496.0066667 38.97333333 59.5 0.039313988 0.500342114 0.327731092 1 1 1 0.25 dme-miR-1012-3p 6mer3-8 TTGACT 2R 21975811 21975816 + 2R_21975811_21975816_+ 0.847353751 0.881104622 0.864229187 0.02386542 CG9304 FBtr0071726|FBtr0345537 21975523|21975523 21976196|21976386 2R + 21975790 21975826 3'utr CG9304 FlyBase G18216.1 AAGTTAACATTTAACTGACTTTTGACTTGAGCTGAGT 6 21975811 0.762634674 3 6 54 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 2R:21975790-21975826 6 CG9304 FBtr0071726|FBtr0345537 21975523|21975523 21976196|21976386 TTGACT 6mer3-8 dme-miR-1012-3p 2R + 21975790 21975825 3'utr CG9304 FlyBase G13868.1 AAGTTAACATTTAACTGACTTTTGACTTGAGCTGAG 11 21975810 0.821556826 4 11 80 1 1.278753601 0.473684211 0.545454545 0.736842105 11 0 0 19 2R:21975790-21975825 6 8.5 859 FBgn0034674 656.3166667 28.69666667 44.06 0.012951065 0.296201649 0.192918747 0 1 0.5 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 2R 21975944 21975950 + 2R_21975944_21975950_+ 0.521094342 0.520731648 0.520912995 0.000256468 CG9304 FBtr0071726|FBtr0345537 21975523|21975523 21976196|21976386 2R + 21975913 21975982 3'utr CG9304 FlyBase G18218.1 AGCGAGTGCAAGAATGCACCAGAGATTGTTGTGTGATTTTATGTAATATGCTTGAATTTATAATTAGTTT 51 21975942 0.991628349 10 50 544 0.983870968 1.785329835 0.064516129 0.196078431 0.338709677 51 1 0 61 2R:21975913-21975982 7 CG9304 FBtr0071726|FBtr0345537 21975523|21975523 21976196|21976386 TGTGATT 7mer-m1 dme-miR-308-3p 2R + 21975911 21975964 3'utr CG9304 FlyBase G13870.1 AGAGCGAGTGCAAGAATGCACCAGAGATTGTTGTGTGATTTTATGTAATATGCT 32 21975942 0.991411445 8 31 336 0.979166667 1.672097858 0.125 0.40625 0.604166667 32 1 0 47 2R:21975911-21975964 7 40 860 FBgn0034674 656.3166667 28.69666667 44.06 0.06094619 1.393890115 0.907852928 2 2 2 0.25 dme-miR-184-5p 8mer-A1 TGATAAGA 2R 22069514 22069521 + 2R_22069514_22069521_+ 0.566114039 0.575454403 0.570784221 0.00660466 Snp FBtr0339101|FBtr0339102|FBtr0339100|FBtr0339099 22069312|22069312|22069312|22069312 22069757|22069757|22069757|22069757 2R + 22069469 22069573 3'utr Snp FlyBase G18225.1 TTTTTTTTTTTTTGCCCTGATTTTATATTTTATTGTAACGGCAATTGATAAGACTTGAACAATTCGAAGCATCGCAGCGATCATACATACAAATAAATTTATAAA 66 22069516 0.965860183 7 64 352 0.950617284 1.886490725 0.12345679 0.181818182 0.333333333 66 4 0 77 2R:22069469-22069573 8 Snp FBtr0339100|FBtr0339099|FBtr0339101|FBtr0339102 22069312|22069312|22069312|22069312 22069757|22069757|22069757|22069757 TGATAAGA 8mer-A1 dme-miR-184-5p 2R + 22069500 22069538 3'utr Snp FlyBase G13876.1 ATTGTAACGGCAATTGATAAGACTTGAACAATTCGAAGC 26 22069516 0.692366864 6 20 124 0.825 1.51851394 0.1 0.461538462 0.65 26 7 0 33 2R:22069500-22069538 8 38 861 FBgn0265192 273.9833333 20.67666667 31.70333333 0.138694568 1.837820409 1.198612133 -2 -2 -2 0.25 dme-miR-8-3p 7mer-A1 AGTATTA 2R 22077766 22077772 + 2R_22077766_22077772_+ 0.810974587 0.736913793 0.77394419 0.052368894 GlcT-1 FBtr0071755 22077671 22079381 2R + 22077680 22077961 3'utr GlcT-1 FlyBase G18240.1 TAGTTAAGTTTGTTATTTTGTACTTGTGAGCAAACGAACTCAGCGGACTGCAAGCGACTGGCGGGCGGCGTCTAGCGTCTGGTAGTAGTATTATTAGCTGAACCTTAGTCACTACGTAAGTCTAGACTTAAAGCTGTAAAAAGGCGAATGCGGAGCGGCATCCACGCACTCCTCCTGGACGTGAAGCGCGGCAGGCGGACCTAGATTAGTTTAGAAGACACTGTTTAGACGACGAGCGTATCGCTGCGATCGCTCGCCAGAGATTTAGATGTAGGCGTTCGA 158 22077776 0.999910226 36 151 1006 0.948979592 1.491361694 0.295918367 0.189873418 0.346938776 158 5 5 186 2R:22077680-22077961 7 GlcT-1 FBtr0071755 22077671 22079381 AGTATTA 7mer-A1 dme-miR-8-3p 2R + 22077613 22077877 stop_codon GlcT-1 FlyBase G13885.1 GGAACAACGGGGGACACGCTGATCTGCACGGGCGCCAAACAGCGACTGCTGGTGTCGTAGCACCTAATAGTTAAGTTTGTTATTTTGTACTTGTGAGCAAACGAACTCAGCGGACTGCAAGCGACTGGCGGGCGGCGTCTAGCGTCTGGTAGTAGTATTATTAGCTGAACCTTAGTCACTACGTAAGTCTAGACTTAAAGCTGTAAAAAGGCGAATGCGGAGCGGCATCCACGCACTCCTCCTGGACGTGAAGCGCGGCAGGCGG 87 22077776 0.970258852 29 81 467 0.928 1.763427994 0.36 0.298850575 0.512 87 8 1 116 2R:22077613-22077877 7 32.5 862 FBgn0067102 306.5833333 10.92333333 16.72333333 0.106007067 2.97528227 1.943392466 -10 -10 -10 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2R 22085376 22085382 + 2R_22085376_22085382_+ 0.822741276 0.714333827 0.768537551 0.076655678 Synj FBtr0071757|FBtr0308239|FBtr0071756 22084902|22084902|22084902 22085767|22085767|22085421 2R + 22085362 22085397 3'utr Synj FlyBase G18263.1 AAATTATAGCCGTACTAGTCAAATTATGAAGTAAAG 10 22085373 0.757413683 4 10 64 1 1.146128036 0.071428571 0.3 0.5 10 0 0 14 2R:22085362-22085397 7 Synj FBtr0071757|FBtr0308239|FBtr0071756 22084902|22084902|22084902 22085767|22085767|22085421 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R + 22085306 22085386 3'utr Synj FlyBase G13903.1 TGAAGTATATGGGCGACAAAGTATTACACTAATCTGCATAAATGTAATGTTTAAATAAATTATAGCCGTACTAGTCAAATT 9 22085367 0.976053773 7 8 51 0.8 1.079181246 0 0.444444444 0.666666667 9 3 0 12 2R:22085306-22085386 7 7.5 863 FBgn0034691 628.3666667 16.23 24.76333333 0.011935706 0.462107209 0.302867142 3 9 6 0.25 dme-miR-282-5p 7mer-A1 GAGGCTA 2R 22085548 22085554 + 2R_22085548_22085554_+ 0.817755066 0.819153849 0.818454458 0.00098903 Synj FBtr0071757|FBtr0308239 22084902|22084902 22085767|22085767 2R + 22085535 22085567 3'utr Synj FlyBase G18265.1 ATTCCGTCAATTTGAGGCTACATCCGGATTTCT 8 22085546 0.734100956 3 8 51 1 1 0 0.125 0.3 8 0 0 10 2R:22085535-22085567 7 Synj FBtr0071757|FBtr0308239 22084902|22084902 22085767|22085767 GAGGCTA 7mer-A1 dme-miR-282-5p 2R + 22085519 22085563 3'utr Synj FlyBase G13904.1 GTTAAACTATCGTTGTATTCCGTCAATTTGAGGCTACATCCGGAT 13 22085546 0.96545828 4 12 85 1 1.255272505 0.111111111 0.307692308 0.5 13 0 0 18 2R:22085519-22085563 7 9.5 864 FBgn0034691 628.3666667 16.23 24.76333333 0.015118561 0.585335798 0.383631714 2 2 2 0.25 dme-miR-283-5p 7mer-A1 GATATTA 2R 22107934 22107940 - 2R_22107934_22107940_- 0.78290792 0.755830675 0.769369297 0.019146472 Vrp1 FBtr0302295|FBtr0071792|FBtr0071796|FBtr0071791|FBtr0071795|FBtr0071793|FBtr0302298|FBtr0071794|FBtr0342980 22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579 22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477 2R - 22107910 22107970 3'utr Vrp1 FlyBase G25635.1 AAGGGAAGGACTATGGAAGCTTCCCCTCGCGATATTACCACTAAGCACACACAATATTATT 36 22107936 0.972761253 7 31 175 0.895833333 0.934498451 0.229166667 0.305555556 0.479166667 36 1 4 43 2R:22107910-22107970 7 Vrp1 FBtr0071793|FBtr0302298|FBtr0071794|FBtr0342980|FBtr0302295|FBtr0071796|FBtr0071792|FBtr0071791|FBtr0071795 22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579 22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477 GATATTA 7mer-A1 dme-miR-283-5p 2R - 22107924 22107987 3'utr Vrp1 FlyBase G19387.1 ATTTTGTTACATTTCAAAAGGGAAGGACTATGGAAGCTTCCCCTCGCGATATTACCACTAAGCA 31 22107936 0.842584372 5 23 172 0.790697674 0.753327667 0.465116279 0.290322581 0.488372093 31 4 5 34 2R:22107924-22107987 7 29 865 FBgn0243516 610.6533333 20.62333333 31.73 0.04749012 1.406174236 0.913961551 -4 -4 -4 0.25 dme-miR-8-3p 6mer3-8 CAGTAT 2R 22108229 22108234 - 2R_22108229_22108234_- 0.89218721 0.993783576 0.942985393 0.071839503 Vrp1 FBtr0302295|FBtr0071792|FBtr0071796|FBtr0071791|FBtr0071795|FBtr0071793|FBtr0302298|FBtr0071794|FBtr0342980 22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579 22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477 2R - 22108163 22108262 3'utr Vrp1 FlyBase G25637.1 AATTTTAATTTTAAAAGTGTATTACTACCAGTATAGATTATTATTGTATAGGAAGGGAAAGCCCAGGCTTACAATCCACAGCACACACATATATATGTTA 13 22108231 0.971263209 10 13 79 1 1.146128036 0.071428571 0.076923077 0.142857143 13 0 0 14 2R:22108163-22108262 6 Vrp1 FBtr0071793|FBtr0302298|FBtr0071794|FBtr0342980|FBtr0302295|FBtr0071796|FBtr0071792|FBtr0071791|FBtr0071795 22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579|22107579 22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477|22108477 CAGTAT 6mer3-8 dme-miR-8-3p 2R - 22108191 22108254 3'utr Vrp1 FlyBase G19389.1 TTTTAAAAGTGTATTACTACCAGTATAGATTATTATTGTATAGGAAGGGAAAGCCCAGGCTTAC 8 22108223 0.993185206 5 6 72 0.846153846 1.041392685 0.076923077 0.375 0.615384615 8 2 0 11 2R:22108191-22108254 6 6 866 FBgn0243516 610.6533333 20.62333333 31.73 0.009825542 0.290932601 0.189095493 -3 -11 -7 0.25 dme-miR-970-3p 6mer2-7 CTTATG 2R 22217220 22217225 + 2R_22217220_22217225_+ 0.471335332 0.707741301 0.589538317 0.167164286 ari-2 FBtr0071774 22216391 22217264 2R + 22217100 22217248 3'utr ari-2 FlyBase G18327.1 AAGAACGAAGATAGATACTCCCCGTCCCCGATCCCGTTCCTTTTGATTCTCACTCGATTCTCGATTAACTTTGTAAGCTGAATCATAAATTATATTCTAGGATTACGCTATGTATGTATGCTTATGCGACTGAATTTGAATTAAATTTA 101 22217223 0.900660744 28 97 888 0.941176471 1.748188027 0.201680672 0.148514851 0.277310924 101 6 1 112 2R:22217100-22217248 6 ari-2 FBtr0071774 22216391 22217264 CTTATG 6mer2-7 dme-miR-970-3p 2R + 22217167 22217248 3'utr ari-2 FlyBase G13951.2 ACTTTGTAAGCTGAATCATAAATTATATTCTAGGATTACGCTATGTATGTATGCTTATGCGACTGAATTTGAATTAAATTTA 39 22217222 0.987367256 13 36 328 0.9375 1.77815125 0.28125 0.461538462 0.671875 39 4 0 60 2R:22217167-22217248 6 46 867 FBgn0025186 276.3333333 11.22 17.22333333 0.166465621 4.099821747 2.670795433 -3 -2 -2.5 0.25 dme-miR-11-3p 7mer-m1 TGTGATG 2R 22298338 22298344 - 2R_22298338_22298344_- 0.535577881 0.535567059 0.53557247 7.64E-06 wdp FBtr0071851|FBtr0071852|FBtr0071849|FBtr0071850|FBtr0342984 22298212|22298212|22298212|22298212|22298212 22298905|22298905|22298905|22298905|22298905 2R - 22298329 22298440 3'utr wdp FlyBase G25682.1 TGAATTCAGTCGTCGAGTGCAAAATATCAATGAGCCGGGGAAAGCGGAAAGGAGTTAACTCTTTTGCATGATAAATGCTATCAATCTGCATCTGCATGTGATGTTCACACCA 19 22298353 0.995783327 9 19 133 1 1.342422681 0.090909091 0.157894737 0.272727273 19 0 0 22 2R:22298329-22298440 7 wdp FBtr0071850|FBtr0342984|FBtr0071852|FBtr0071849|FBtr0071851 22298212|22298212|22298212|22298212|22298212 22298905|22298905|22298905|22298905|22298905 TGTGATG 7mer-m1 dme-miR-11-3p 2R - 22298329 22298410 3'utr wdp FlyBase G19428.1 TGAGCCGGGGAAAGCGGAAAGGAGTTAACTCTTTTGCATGATAAATGCTATCAATCTGCATCTGCATGTGATGTTCACACCA 12 22298351 0.980695754 7 11 72 0.916666667 1.342422681 0.166666667 0.75 0.875 12 2 0 22 2R:22298329-22298410 7 8 868 FBgn0034718 26.33333333 1.036666667 1.556666667 0.303797468 7.717041801 5.139186296 9 7 8 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2R 22298467 22298473 - 2R_22298467_22298473_- 0.648110168 0.603928294 0.626019231 0.031241321 wdp FBtr0071851|FBtr0071852|FBtr0071849|FBtr0071850|FBtr0342984 22298212|22298212|22298212|22298212|22298212 22298905|22298905|22298905|22298905|22298905 2R - 22298453 22298499 3'utr wdp FlyBase G25683.1 ACTCCTAAGCGTAAATCTAGTTTAATACCAAAGTTAAAAAAATATAT 77 22298474 0.784598154 4 74 530 0.943820225 1.447158031 0.123595506 0.142857143 0.258426966 77 3 2 84 2R:22298453-22298499 7 wdp FBtr0071850|FBtr0342984|FBtr0071852|FBtr0071849|FBtr0071851 22298212|22298212|22298212|22298212|22298212 22298905|22298905|22298905|22298905|22298905 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 22298443 22298493 3'utr wdp FlyBase G19429.1 AAGCGTAAATCTAGTTTAATACCAAAGTTAAAAAAATATATGCGTTTAAAC 31 22298466 0.952245437 4 30 190 0.977272727 1.633468456 0.068181818 0.290322581 0.5 31 1 0 43 2R:22298443-22298493 7 54 869 FBgn0034718 26.33333333 1.036666667 1.556666667 2.050632911 52.09003215 34.68950749 1 -7 -3 0.25 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2R 22328788 22328793 + 2R_22328788_22328793_+ 0.958081233 0.967177439 0.962629336 0.006431985 Gp150 FBtr0071815|FBtr0071813|FBtr0342986|FBtr0342985|FBtr0071816|FBtr0071814 22328523|22328523|22328523|22328523|22328523|22328523 22329416|22329416|22329416|22329416|22329416|22329416 2R + 22328617 22328848 3'utr Gp150 FlyBase G18349.2 AAAGTGGAAAATCACATCAGACAATTGACTAAACACAAGCACAAGAATGTAAGAAACAGGAGGAGGAGCAGTAGGTGGCAGTTAAAAGTATTAGCGAAAGTGCGAGGAAACAAAGCAACAACTAAAAAATACTTGAATCCAAATAAGAGATTGAAAGAGAGAGAATAAATCTTTGACAAAATCCTTTATCCTTGAAATATCCTGTACCATCAAATACTGTTAAGACCAGTCA 339 22328789 0.975198585 24 318 1705 0.945595855 1.717194824 0.098445596 0.109144543 0.21761658 339 15 6 365 2R:22328617-22328848 6 Gp150 FBtr0071814|FBtr0071816|FBtr0342985|FBtr0342986|FBtr0071813|FBtr0071815 22328523|22328523|22328523|22328523|22328523|22328523 22329416|22329416|22329416|22329416|22329416|22329416 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2R + 22328615 22328813 3'utr Gp150 FlyBase G13968.2 AAAAAGTGGAAAATCACATCAGACAATTGACTAAACACAAGCACAAGAATGTAAGAAACAGGAGGAGGAGCAGTAGGTGGCAGTTAAAAGTATTAGCGAAAGTGCGAGGAAACAAAGCAACAACTAAAAAATACTTGAATCCAAATAAGAGATTGAAAGAGAGAGAATAAATCTTTGACAAAATCCTTTATCCTTGAAA 184 22328788 0.973954171 24 168 822 0.928057554 1.566521666 0.133093525 0.375 0.586330935 184 14 6 258 2R:22328615-22328813 6 147 870 FBgn0013272 4600.843333 132.9433333 202.8033333 0.031950664 1.105734273 0.724840157 -1 0 -0.5 0.25 dme-miR-33-5p 6mer3-8 CAATGC 2R 22378402 22378407 + 2R_22378402_22378407_+ 0.947016065 0.997309444 0.972162755 0.035562733 Rtf1 FBtr0342988 22377752 22378484 2R + 22378343 22378467 3'utr Rtf1 FlyBase G18367.1 ATTGAAAGGGTTATATAAGACTCATTCAAGCGAGTATGTATCCGTTGGTTGTAACCGTTCAATGCTGTATTAGATTAAGGCAAAATTCATCAGTTGTAGCAACAGCTTTCATATACTTAAATATA 34 22378406 0.982121753 17 33 259 0.97826087 1.653212514 0.282608696 0.264705882 0.456521739 34 1 0 45 2R:22378343-22378467 6 Rtf1 FBtr0342988 22377752 22378484 CAATGC 6mer3-8 dme-miR-33-5p 2R + 22378378 22378464 3'utr Rtf1 FlyBase G13981.1 ATGTATCCGTTGGTTGTAACCGTTCAATGCTGTATTAGATTAAGGCAAAATTCATCAGTTGTAGCAACAGCTTTCATATACTTAAAT 16 22378405 0.912420192 8 16 124 1 1.301029996 0.15 0.25 0.4 16 0 0 20 2R:22378378-22378464 6 12.5 871 FBgn0034722 664.7666667 27.26666667 41.77666667 0.01880359 0.458435208 0.299210085 -4 -3 -3.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 22425950 22425955 - 2R_22425950_22425955_- 0.693741227 0.987840672 0.84079095 0.207959751 CG10344 FBtr0071840|FBtr0071840|FBtr0071840|FBtr0071841|FBtr0071841|FBtr0071841 22425731|22425731|22425731|22425731|22425731|22425731 22426203|22426203|22426203|22426021|22426021|22426021 2R - 22425905 22426006 3'utr CG10344 FlyBase G25720.1 AGGATAAATATCTGCTGTGCAGTTCCTACCTGGGGATCCCGTAAATGACTACTGTGACTTTGGCAACCTCTGGCTGGTTAAATGTTAGTCTTAAGATAGTGA 43 22425947 0.979602929 14 41 285 0.961538462 1.397940009 0.096153846 0.139534884 0.288461538 43 1 1 50 2R:22425905-22426006 6 CG10344 FBtr0071841|FBtr0071841|FBtr0071841|FBtr0071840|FBtr0071840|FBtr0071840 22425731|22425731|22425731|22425731|22425731|22425731 22426021|22426021|22426021|22426203|22426203|22426203 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 22425905 22425998 3'utr CG10344 FlyBase G19456.1 TATCTGCTGTGCAGTTCCTACCTGGGGATCCCGTAAATGACTACTGTGACTTTGGCAACCTCTGGCTGGTTAAATGTTAGTCTTAAGATAGTGA 29 22425948 0.983546925 9 27 212 0.930232558 1.602059991 0.046511628 0.379310345 0.581395349 29 3 0 40 2R:22425905-22425998 6 23.5 872 FBgn0034729 69.31 7.356666667 11.47666667 0.339056413 3.194381513 2.047632878 -8 -7 -7.5 0.25 dme-miR-999-3p 8mer-A1 AGTTAACA 2R 22496708 22496715 - 2R_22496708_22496715_- 0.643925372 0.637610084 0.640767728 0.004465591 px FBtr0331941|FBtr0112820|FBtr0071838 22496502|22496502|22496502 22496802|22496802|22496802 2R - 22496680 22496739 3'utr px FlyBase G25726.1 TGAAAGTCGCATCGGATCGGAACTAGTTAACATCTACCTTCAGTAACATTATACTAAGCG 18 22496715 0.692980713 8 16 126 0.9 0.954242509 0.1 0.111111111 0.2 18 1 1 18 2R:22496680-22496739 8 px FBtr0112820|FBtr0071838|FBtr0331941 22496502|22496502|22496502 22496802|22496802|22496802 AGTTAACA 8mer-A1 dme-miR-999-3p 2R - 22496687 22496739 3'utr px FlyBase G19460.1 TGAAAGTCGCATCGGATCGGAACTAGTTAACATCTACCTTCAGTAACATTATA 11 22496715 0.773194885 5 11 68 1 1.278753601 0.368421053 0.454545455 0.684210526 11 0 0 19 2R:22496687-22496739 8 13.5 873 FBgn0003175 880.3466667 16.72333333 25.61666667 0.015334868 0.807255332 0.527000651 0 0 0 0.25 dme-miR-1008-3p 7mer-A1 GCTGTGA 2R 22600273 22600279 + 2R_22600273_22600279_+ 0.799610876 0.801399989 0.800505432 0.001265085 CG4269 FBtr0343001|FBtr0071854|FBtr0343000 22600206|22600206|22600206 22600695|22600336|22600336 2R + 22600252 22600305 3'utr CG4269 FlyBase G18424.1 TTCGCGCTCCTGCATGGATTGGCTGTGATAAACCCACTGTATTTATTTAAATTA 252 22600271 0.767058443 10 232 1885 0.927007299 1.404833717 0.00729927 0.079365079 0.153284672 252 11 9 254 2R:22600252-22600305 7 CG4269 FBtr0071854|FBtr0343000|FBtr0343001 22600206|22600206|22600206 22600336|22600336|22600695 GCTGTGA 7mer-A1 dme-miR-1008-3p 2R + 22600252 22600306 3'utr CG4269 FlyBase G14017.1 TTCGCGCTCCTGCATGGATTGGCTGTGATAAACCCACTGTATTTATTTAAATTAT 137 22600271 0.984321713 8 121 972 0.868932039 1.298610522 0.038834951 0.350364964 0.567961165 137 19 8 179 2R:22600252-22600306 7 192.5 874 FBgn0034741 15.34666667 2.056666667 3.076666667 12.54344049 93.59805511 62.56771398 2 2 2 0.25 dme-miR-14-3p 8mer-A1 AAGACTGA 2R 22672600 22672607 + 2R_22672600_22672607_+ 0.632973315 0.64356438 0.638268847 0.007489039 RYBP FBtr0071868|FBtr0345500 22671942|22671942 22673212|22673212 2R + 22672578 22672695 3'utr RYBP FlyBase G18456.1 TAATTTTAATTTGTTTGTATACAAGACTGATTAAGCGTTACCAACCAGATATAGAGAGGTCCGCACACGCACCCAGCCCGAATCCGATTTTCCTTTTGGTTTACACCCGAGATAGCCT 32 22672609 0.984839309 11 32 254 1 1.556302501 0.222222222 0.125 0.222222222 32 0 0 36 2R:22672578-22672695 8 RYBP FBtr0071868|FBtr0345500 22671942|22671942 22673212|22673212 AAGACTGA 8mer-A1 dme-miR-14-3p 2R + 22672542 22672629 3'utr RYBP FlyBase G14037.1 GAAGAGAGCCACGTAGCTTGGTTGTAGACAATTTGCTAATTTTAATTTGTTTGTATACAAGACTGATTAAGCGTTACCAACCAGATAT 22 22672593 0.991646961 9 17 188 0.806451613 0.795880017 0.096774194 0.318181818 0.516129032 22 3 3 25 2R:22672542-22672629 8 24.5 875 FBgn0034763 242.2733333 14.13333333 21.79333333 0.101125451 1.733490566 1.124197002 -9 7 -1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 22685402 22685408 - 2R_22685402_22685408_- 0.79608791 0.792624161 0.794356036 0.002449206 Ppa FBtr0343014|FBtr0343014|FBtr0343014 22684953|22684953|22684953 22687104|22687104|22687104 2R - 22685364 22685457 3'utr Ppa FlyBase G25792.1 AGAGAAGGTAACGATTGAAAAGAATACGCGAATTAATTCTTTTTTCTATTGTGATATAAAATGTATTGTATAAAAAAGAACACATAAGCAAGCA 60 22685409 0.993571404 13 51 628 0.844155844 0.967815317 0.064935065 0.233333333 0.402597403 60 6 6 65 2R:22685364-22685457 7 Ppa FBtr0343014|FBtr0343014|FBtr0343014 22684953|22684953|22684953 22687104|22687104|22687104 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 22685361 22685457 3'utr Ppa FlyBase G19514.1 AGAGAAGGTAACGATTGAAAAGAATACGCGAATTAATTCTTTTTTCTATTGTGATATAAAATGTATTGTATAAAAAAGAACACATAAGCAAGCAGCA 49 22685409 0.984489713 12 45 482 0.905405405 1.047923552 0.094594595 0.408163265 0.608108108 49 2 5 67 2R:22685361-22685457 7 41.5 876 FBgn0020257 1130.93 34.32 53.00666667 0.036695463 1.209207459 0.782920387 1 1 1 0.25 dme-miR-34-5p 6mer2-7 ACTGCC 2R 22692827 22692832 - 2R_22692827_22692832_- 0.810690963 0.792452817 0.80157189 0.012896355 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 2R - 22692787 22692854 3'utr robo FlyBase G25801.1 GAAACCAACTTGCTTGAGTTGAACTGCCCTTCCGTAGCCATATACATATAGAGAAAGCATAGTTGGGT 124 22692825 0.762779106 9 123 868 0.993421053 1.877946952 0.25 0.185483871 0.335526316 124 0 1 151 2R:22692787-22692854 6 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 ACTGCC 6mer2-7 dme-miR-34-5p 2R - 22692766 22692854 3'utr robo FlyBase G19522.1 GAAACCAACTTGCTTGAGTTGAACTGCCCTTCCGTAGCCATATACATATAGAGAAAGCATAGTTGGGTCTGGGTTTTAATAATTAGCAA 83 22692825 0.977956071 10 82 558 0.991735537 1.77815125 0.214876033 0.361445783 0.561983471 83 0 1 120 2R:22692766-22692854 6 96.5 877 FBgn0005631 940.4766667 16.89666667 25.92333333 0.102607543 5.711185638 3.722515109 -7 -7 -7 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2R 22693464 22693471 - 2R_22693464_22693471_- 0.580451663 0.575862784 0.578157224 0.003244842 robo FBtr0343013|FBtr0343013|FBtr0343013|FBtr0071922|FBtr0071922|FBtr0071922 22692522|22692522|22692522|22692522|22692522|22692522 22694552|22694552|22694552|22694552|22694552|22694552 2R - 22693422 22693574 3'utr robo FlyBase G25805.1 CGAACCAACCCCAGTTGTCCGTTCCGTTGTCCTGTCCCTGTGCAGATCCCTCCAAGACACAATGTTTTCTACAATCTTGCATTTTGAAAAGTCTAAAATGTACCTGTGATATAACCCCATTATACATTATAGTATTTTAATAATTTTTATATT 358 22693475 0.98091123 24 335 2417 0.934831461 2.619093331 0.139325843 0.187150838 0.346067416 358 29 0 416 2R:22693422-22693574 8 robo FBtr0343013|FBtr0343013|FBtr0343013|FBtr0071922|FBtr0071922|FBtr0071922 22692522|22692522|22692522|22692522|22692522|22692522 22694552|22694552|22694552|22694552|22694552|22694552 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 22693434 22693572 3'utr robo FlyBase G19525.1 AACCAACCCCAGTTGTCCGTTCCGTTGTCCTGTCCCTGTGCAGATCCCTCCAAGACACAATGTTTTCTACAATCTTGCATTTTGAAAAGTCTAAAATGTACCTGTGATATAACCCCATTATACATTATAGTATTTTAAT 205 22693476 0.980634727 17 190 1353 0.918918919 1.957447649 0.094594595 0.326829268 0.533783784 205 22 2 272 2R:22693434-22693572 8 246.5 878 FBgn0005631 940.4766667 16.89666667 25.92333333 0.262101133 14.58867627 9.508808024 4 5 4.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2R 22693884 22693890 - 2R_22693884_22693890_- 0.574716876 0.708299619 0.641508247 0.094457233 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 2R - 22693859 22693950 3'utr robo FlyBase G25807.1 TGTAGTTAGAACCAAAGTACACCATTTGTACAGCATGTTTTGGGGGCTTTTGAATCGGTCCTAGTCAATAGGCTTGATAGCGATACAATACG 46 22693882 0.980837236 9 43 315 0.967213115 1.770852012 0.229508197 0.260869565 0.442622951 46 2 0 59 2R:22693859-22693950 7 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R - 22693870 22693925 3'utr robo FlyBase G19528.1 TTGTACAGCATGTTTTGGGGGCTTTTGAATCGGTCCTAGTCAATAGGCTTGATAGC 19 22693910 0.743677599 7 18 163 0.961538462 1.096910013 0.076923077 0.315789474 0.5 19 0 1 25 2R:22693870-22693925 7 21.5 879 FBgn0005631 940.4766667 16.89666667 25.92333333 0.022860748 1.272440324 0.829368651 -8 20 6 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 22694136 22694143 - 2R_22694136_22694143_- 0.492657775 0.493443465 0.49305062 0.000555574 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 2R - 22694112 22694297 3'utr robo FlyBase G25808.1 ACTTGTCACAATCATGGGGGCATTGTGCAGCTTTAGCAATTACGAATTTTTCCATTATCACATCTACCAGCGTAGAGACTCATAGACAGGCACAGTGCCCCTTCCCCATCCATGCACCACAGAAATGTTTCCCCAATGGGAAACGAGAACCTTTGTACTTAAGAGACGCGAGTGCTGTACGATAGA 368 22694144 0.961475004 18 354 1902 0.954545455 1.998912904 0.277511962 0.116847826 0.222488038 368 16 3 399 2R:22694112-22694297 8 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 GTACTTAA 8mer-A1 dme-miR-252-5p 2R - 22694116 22694168 3'utr robo FlyBase G19530.1 TCCCCAATGGGAAACGAGAACCTTTGTACTTAAGAGACGCGAGTGCTGTACGA 144 22694144 0.648028922 7 141 760 0.957345972 2.305351369 0.383886256 0.354166667 0.559241706 144 9 0 202 2R:22694116-22694168 8 188.5 880 FBgn0005631 940.4766667 16.89666667 25.92333333 0.200430278 11.15604656 7.27144143 1 1 1 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 22694494 22694500 - 2R_22694494_22694500_- 0.638948378 0.645407212 0.642177795 0.004567061 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 2R - 22694421 22694528 3'utr robo FlyBase G25809.1 AATAGGGGGATTAGGATTAAAGATAGCATCTAGTCTAACTCTTCATTCATATCGAACTGGAAATCAGTCTAGGAACTGAGTGAACTCAAAGTTTCTGCATCAGTTATC 53 22694500 0.981465663 10 51 372 0.951612903 1.770852012 0.112903226 0.150943396 0.274193548 53 3 0 59 2R:22694421-22694528 7 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R - 22694467 22694516 3'utr robo FlyBase G19532.1 AGGATTAAAGATAGCATCTAGTCTAACTCTTCATTCATATCGAACTGGAA 22 22694500 0.721435469 4 17 127 0.793103448 1.06069784 0.068965517 0.227272727 0.413793103 22 5 1 23 2R:22694467-22694516 7 32 881 FBgn0005631 940.4766667 16.89666667 25.92333333 0.034025299 1.893864668 1.234409155 0 0 0 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2R 22804138 22804143 - 2R_22804138_22804143_- 0.702191458 0.766000123 0.73409579 0.045119494 CycB FBtr0309858|FBtr0071911|FBtr0071913|FBtr0071914 22803519|22803519|22803519|22803519 22804293|22804293|22804293|22804293 2R - 22804123 22804179 3'utr CycB FlyBase G25819.1 GCGTATAGTTACCGTAGTCGCATTGCCAACTATCTTTACCTGCATCACCCATCCCTA 51 22804145 0.653371247 8 50 382 0.984615385 1.505149978 0.061538462 0.196078431 0.369230769 51 0 1 64 2R:22804123-22804179 6 CycB FBtr0309858|FBtr0071911|FBtr0071913|FBtr0071914 22803519|22803519|22803519|22803519 22804293|22804293|22804293|22804293 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2R - 22804124 22804167 3'utr CycB FlyBase G19540.1 CGTAGTCGCATTGCCAACTATCTTTACCTGCATCACCCATCCCT 32 22804145 0.632276229 5 27 222 0.844444444 0.880813592 0.088888889 0.34375 0.533333333 32 3 4 38 2R:22804124-22804167 6 38 882 FBgn0000405 1807.483333 83.51333333 128.11 0.021023707 0.455017163 0.296620092 2 2 2 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 2R 22931818 22931824 + 2R_22931818_22931824_+ 0.518553122 0.48836142 0.503457271 0.021348756 CG42678 FBtr0345078|FBtr0302769|FBtr0302773|FBtr0345077|FBtr0302768|FBtr0344190|FBtr0302772|FBtr0345079|FBtr0302770|FBtr0302771 22931633|22931278|22931633|22931533|22929536|22931533|22931278|22931633|22931278|22931278 22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044 2R + 22931806 22931843 3'utr CG42678 FlyBase G18491.1 GTGTACTTTGTTTGTGATTCTATTAGAGCTCCGGGCGC 17 22931816 0.618590426 8 16 176 0.818181818 1.255272505 0.181818182 0.176470588 0.363636364 17 4 0 18 2R:22931806-22931843 7 CG42678 FBtr0345077|FBtr0302773|FBtr0302769|FBtr0345078|FBtr0302770|FBtr0302771|FBtr0302772|FBtr0345079|FBtr0344190|FBtr0302768 22931533|22931633|22931278|22931633|22931278|22931278|22931278|22931633|22931533|22929536 22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044 TGTGATT 7mer-m1 dme-miR-308-3p 2R + 22931806 22931826 3'utr CG42678 FlyBase G14067.1 GTGTACTTTGTTTGTGATTCT 5 22931817 0.657456855 3 5 55 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2R:22931806-22931826 7 10.5 883 FBgn0261564 564.6666667 33.59333333 51.19333333 0.018595041 0.312562016 0.205104831 2 1 1.5 0.25 dme-miR-1012-3p 6mer2-7 TGACTA 2R 22931877 22931882 + 2R_22931877_22931882_+ 0.660103391 0.999710844 0.829907117 0.240138695 CG42678 FBtr0345078|FBtr0302769|FBtr0302773|FBtr0345077|FBtr0302768|FBtr0344190|FBtr0302772|FBtr0345079|FBtr0302770|FBtr0302771 22931633|22931278|22931633|22931533|22929536|22931533|22931278|22931633|22931278|22931278 22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044 2R + 22931847 22931898 3'utr CG42678 FlyBase G18492.1 TCGTCCTGGTTGCCACTGGTACTCATTTCGTGACTAGTTTAGCGTTAAGCGA 7 22931872 0.988352294 3 7 64 1 0.84509804 0 0 0 7 0 0 7 2R:22931847-22931898 6 CG42678 FBtr0345077|FBtr0302773|FBtr0302769|FBtr0345078|FBtr0302770|FBtr0302771|FBtr0302772|FBtr0345079|FBtr0344190|FBtr0302768 22931533|22931633|22931278|22931633|22931278|22931278|22931278|22931633|22931533|22929536 22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044|22932044 TGACTA 6mer2-7 dme-miR-1012-3p 2R + 22931846 22931897 3'utr CG42678 FlyBase G14068.1 TTCGTCCTGGTTGCCACTGGTACTCATTTCGTGACTAGTTTAGCGTTAAGCG 7 22931872 0.987490085 5 6 55 1 1.079181246 0.333333333 0.571428571 0.75 7 0 0 12 2R:22931846-22931897 6 5.5 884 FBgn0261564 564.6666667 33.59333333 51.19333333 0.00974026 0.163722961 0.107435864 5 5 5 0.25 dme-miR-308-3p 8mer-m1 CTGTGATT 2R 22934614 22934621 - 2R_22934614_22934621_- 0.385559813 0.373006211 0.379283012 0.008876736 CG3800 FBtr0071994|FBtr0303464 22934567|22934567 22936014|22936014 2R - 22934560 22934651 3'utr CG3800 FlyBase G25898.1 ACGATGAAGGAAATGAAAATTCAAATATCACTGTGATTGTTTTTTAATTGTAAATTAAAATGCTGGAGCTGCTGATTTGAGACAAAAAAAAA 107 22934614 0.985027004 20 98 1119 0.906976744 1.767155866 0.046511628 0.158878505 0.302325581 107 11 1 117 2R:22934560-22934651 8 CG3800 FBtr0071994|FBtr0303464 22934567|22934567 22936014|22936014 CTGTGATT 8mer-m1 dme-miR-308-3p 2R - 22934570 22934638 3'utr CG3800 FlyBase G19600.1 TGAAAATTCAAATATCACTGTGATTGTTTTTTAATTGTAAATTAAAATGCTGGAGCTGCTGATTTGAGA 60 22934614 0.991282586 8 58 624 0.990291262 2.008600172 0.029126214 0.516666667 0.718446602 60 1 0 102 2R:22934570-22934638 8 74 885 FBgn0034802 11327.54667 555.1 855.97 0.006532747 0.133309314 0.086451628 -7 -7 -7 0.25 dme-miR-1006-3p 7mer-A1 GAATTTA 2R 22935330 22935336 - 2R_22935330_22935336_- 0.823262318 0.823119249 0.823190783 0.000101187 CG3800 FBtr0071994|FBtr0303464 22934567|22934567 22936014|22936014 2R - 22935271 22935378 5'utr CG3800 FlyBase G25903.1 TAATTATACCTATATGATTATATGATTATGCTGCAAGTGTTTGAATTTACTAATTACATTATAACGAATGGAATGAAACTATATAAGATTATATAAAGAAAAATACCT 26 22935338 0.986494315 16 23 195 0.892857143 1.397940009 0.178571429 0.076923077 0.142857143 26 3 0 25 2R:22935271-22935378 7 CG3800 FBtr0071994|FBtr0303464 22934567|22934567 22936014|22936014 GAATTTA 7mer-A1 dme-miR-1006-3p 2R - 22935312 22935372 5'utr CG3800 FlyBase G19604.2 TACCTATATGATTATATGATTATGCTGCAAGTGTTTGAATTTACTAATTACATTATAACGA 19 22935339 0.901070562 9 14 164 0.84375 0.954242509 0.28125 0.578947368 0.75 19 3 2 27 2R:22935312-22935372 7 12.5 886 FBgn0034802 11327.54667 555.1 855.97 0.001103505 0.022518465 0.014603316 2 3 2.5 0.25 dme-miR-2a-2-5p 7mer-A1 GATGAGA 2R 22935431 22935437 - 2R_22935431_22935437_- 0.758210322 0.744857203 0.751533762 0.009442068 CG3800 FBtr0071994|FBtr0303464 22934567|22934567 22936014|22936014 2R - 22935405 22935548 5'utr CG3800 FlyBase G25904.1 AGAAGACGATAGCCAACGGCAGCTGTGCAGCCGAGAGAGCAGATGACACCGACGACGAGGAAGAGGATGAGGTAGAAGATGAGGAAGAAGACACGACGACCCAATTTGTAAGATGAGACTAAACCACAACAGCAACAACAAAAG 363 22935435 0.938356045 12 352 1369 0.96912114 2.309630167 0.104513064 0.14600551 0.263657957 363 12 1 408 2R:22935405-22935548 7 CG3800 FBtr0071994|FBtr0303464 22934567|22934567 22936014|22936014 GATGAGA 7mer-A1 dme-miR-2a-2-5p 2R - 22935394 22935548 5'utr CG3800 FlyBase G19605.1 AGAAGACGATAGCCAACGGCAGCTGTGCAGCCGAGAGAGCAGATGACACCGACGACGAGGAAGAGGATGAGGTAGAAGATGAGGAAGAAGACACGACGACCCAATTTGTAAGATGAGACTAAACCACAACAGCAACAACAAAAGAAATCACCAAG 241 22935435 0.930028914 11 233 846 0.971910112 2.539076099 0.070224719 0.340248963 0.553370787 241 10 0 346 2R:22935394-22935548 7 284 887 FBgn0034802 11327.54667 555.1 855.97 0.025071625 0.511619528 0.331787329 -2 -2 -2 0.25 dme-miR-980-3p 6mer2-7 GCAGCT 2R 22938801 22938806 + 2R_22938801_22938806_+ 0.687460045 0.907572923 0.797516484 0.155643324 CG9849 FBtr0302895|FBtr0071951 22938783|22938783 22939025|22939025 2R + 22938764 22938822 stop_codon CG9849 FlyBase G18494.1 CCGCCGTGGCTGGGCTGGTGACGTGATCGGATTACATGCAGCTCAAAGGACTCGTGTGA 22 22938800 0.857419269 5 21 132 0.958333333 1.361727836 0.208333333 0.090909091 0.166666667 22 1 0 23 2R:22938764-22938822 6 CG9849 FBtr0302895|FBtr0071951 22938783|22938783 22939025|22939025 GCAGCT 6mer2-7 dme-miR-980-3p 2R + 22938779 22938822 stop_codon CG9849 FlyBase G14069.1 TGGTGACGTGATCGGATTACATGCAGCTCAAAGGACTCGTGTGA 9 22938800 0.785550638 3 9 48 1 1.322219295 0.238095238 0.777777778 0.904761905 9 0 0 21 2R:22938779-22938822 6 14.5 888 FBgn0034803 110.3333333 14.92666667 22.72333333 0.13141994 0.971415811 0.638110606 1 1 1 0.25 dme-bantam-3p 6mer3-8 TGATCT 2R 23071694 23071699 + 2R_23071694_23071699_+ 0.997486983 0.997906674 0.997696828 0.000296773 l(2)k09913 FBtr0071960|FBtr0343188|FBtr0343192|FBtr0071959|FBtr0343191|FBtr0071961|FBtr0343189|FBtr0343190|FBtr0071958 23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554 23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875 2R + 23071539 23071725 stop_codon l(2)k09913 FlyBase G18510.1 AGCGCGCCAAGTTGTAGGTGTCTCTAACGAGGAGCGGCTGATCAGTTCAGTGATATACATTTATTCAAGAATCAATGCGATTATGATTTTACCCTAGTTGCTAAGACCTAAAGATTAACGAGCAATGTAAAACCAATGTCCTCTTTGAATGATTATGATCTGTGTGTCTCTCGCGAGGCAGAATCTT 284 23071694 0.986472032 37 272 2343 0.964391691 2.034762106 0.228486647 0.151408451 0.284866469 284 10 2 325 2R:23071539-23071725 6 l(2)k09913 FBtr0071961|FBtr0343191|FBtr0343190|FBtr0071958|FBtr0343189|FBtr0343188|FBtr0071960|FBtr0071959|FBtr0343192 23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554 23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875 TGATCT 6mer3-8 dme-bantam-3p 2R + 23071564 23071722 3'utr l(2)k09913 FlyBase G14081.1 AACGAGGAGCGGCTGATCAGTTCAGTGATATACATTTATTCAAGAATCAATGCGATTATGATTTTACCCTAGTTGCTAAGACCTAAAGATTAACGAGCAATGTAAAACCAATGTCCTCTTTGAATGATTATGATCTGTGTGTCTCTCGCGAGGCAGAAT 168 23071694 0.893394118 23 159 1351 0.940677966 2.346352974 0.266949153 0.297619048 0.5 168 14 0 222 2R:23071564-23071722 6 112 889 FBgn0021979 722.6 59.48666667 89.72333333 0.154995848 1.882774852 1.248281755 0 0 0 0.25 dme-miR-304-5p 6mer3-8 TGAGAT 2R 23071823 23071828 + 2R_23071823_23071828_+ 0.920587109 0.931187526 0.925887318 0.007495615 l(2)k09913 FBtr0071960|FBtr0343188|FBtr0343192|FBtr0071959|FBtr0343191|FBtr0071961|FBtr0343189|FBtr0343190|FBtr0071958 23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554 23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875 2R + 23071771 23071849 3'utr l(2)k09913 FlyBase G18511.1 TTCATCAACCGAGAGAAGAATGCACTACGCCTCTATATTGTTACATATATTTTGAGATCGCTGCAAAACAGCTAAATAA 23 23071822 0.972095263 4 23 141 1 1.431363764 0.185185185 0.130434783 0.259259259 23 0 0 27 2R:23071771-23071849 6 l(2)k09913 FBtr0071961|FBtr0343191|FBtr0343190|FBtr0071958|FBtr0343189|FBtr0343188|FBtr0071960|FBtr0071959|FBtr0343192 23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554 23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875 TGAGAT 6mer3-8 dme-miR-304-5p 2R + 23071807 23071848 3'utr l(2)k09913 FlyBase G14083.1 ATTGTTACATATATTTTGAGATCGCTGCAAAACAGCTAAATA 14 23071822 0.703581161 3 13 108 0.95 1.278753601 0 0.428571429 0.6 14 1 0 19 2R:23071807-23071848 6 13.5 890 FBgn0021979 722.6 59.48666667 89.72333333 0.018682535 0.226941612 0.150462533 1 1 1 0.25 dme-bantam-3p 7mer-m8 TGATCTC 2R 23355188 23355194 + 2R_23355188_23355194_+ 0.474137029 0.4476882 0.460912614 0.018702126 CG30409 FBtr0072004|FBtr0305674 23354922|23354922 23355321|23355321 2R + 23355169 23355208 5'utr CG30409 FlyBase G18522.1 AAATCCCGCACCGGCGGCTTGATCTCTGTGACATTGAAGT 14 23355187 0.790699754 3 13 80 0.9375 1.176091259 0.25 0.142857143 0.25 14 1 0 15 2R:23355169-23355208 7 CG30409 FBtr0305674|FBtr0072004 23354922|23354922 23355321|23355321 TGATCTC 7mer-m8 dme-bantam-3p 2R + 23355170 23355200 5'utr CG30409 FlyBase G14091.1 AATCCCGCACCGGCGGCTTGATCTCTGTGAC 11 23355187 0.71377672 3 11 58 1 1.255272505 0.722222222 0.545454545 0.722222222 11 0 0 18 2R:23355170-23355200 7 12.5 891 FBgn0050409 2.333333333 0.296666667 0.423333333 5.357142857 42.13483146 29.52755906 1 1 1 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 23356109 23356116 + 2R_23356109_23356116_+ 0.62193962 0.623073765 0.622506692 0.000802001 Rpi FBtr0301852|FBtr0305675 23356078|23356078 23356192|23356441 2R + 23356082 23356152 3'utr Rpi FlyBase G18526.1 CTTGGGCGGAGTTGGGGGAGCGCTTTTTGCATTTATGTTTCACCAAGTTGTTCCTTAAATTTTAGGTTTGC 41 23356108 0.74232017 10 41 406 1 1.698970004 0.08 0.195121951 0.34 41 0 0 50 2R:23356082-23356152 8 Rpi FBtr0305675 23356078 23356441 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 23356078 23356153 stop_codon Rpi FlyBase G14095.1 AGTTCTTGGGCGGAGTTGGGGGAGCGCTTTTTGCATTTATGTTTCACCAAGTTGTTCCTTAAATTTTAGGTTTGCC 41 23356108 0.736360172 10 40 419 1 1.785329835 0.098360656 0.317073171 0.540983607 41 0 0 61 2R:23356078-23356153 8 27 892 FBgn0050410 217.7933333 24.45 37.62 0.123970737 1.104294479 0.717703349 1 1 1 0.25 dme-miR-33-5p 8mer-A1 CAATGCAA 2R 23528178 23528185 + 2R_23528178_23528185_+ 0.551093773 0.605245203 0.578169488 0.038290822 mi FBtr0072058 23527637 23528260 2R + 23528153 23528205 3'utr mi FlyBase G18577.1 TTTACTTAACTACCGCACGAGTACTCAATGCAACTGAAATTAAGCTGAAGCAA 27 23528177 0.752974174 8 26 134 0.96969697 1.505149978 0.393939394 0.185185185 0.333333333 27 1 0 32 2R:23528153-23528205 8 mi FBtr0072058 23527637 23528260 CAATGCAA 8mer-A1 dme-miR-33-5p 2R + 23528160 23528199 3'utr mi FlyBase G14126.1 AACTACCGCACGAGTACTCAATGCAACTGAAATTAAGCTG 23 23528177 0.666945338 7 22 80 0.967741935 1.477121255 0.258064516 0.304347826 0.483870968 23 1 0 30 2R:23528160-23528199 8 25 893 FBgn0261786 586.8166667 18.49 28.43 0.042602744 1.352082207 0.879352796 1 1 1 0.25 dme-miR-33-5p 7mer-A1 AATGCAA 2R 23544848 23544854 - 2R_23544848_23544854_- 0.64855444 0.729546112 0.689050276 0.05726978 wmd FBtr0113112|FBtr0072114 23544821|23544821 23545063|23545063 2R - 23544832 23544920 3'utr wmd FlyBase G25995.1 TATTCCAACGCTGAACTCTCTCATTGGCATTAAATGATAATCACAACACACAAAACTACATTGTGAAATGCAATAGAAATAAATAACTT 42 23544860 0.838011463 8 40 220 0.963636364 1.423245874 0.127272727 0.238095238 0.418181818 42 1 1 53 2R:23544832-23544920 7 wmd FBtr0113112|FBtr0072114 23544821|23544821 23545063|23545063 AATGCAA 7mer-A1 dme-miR-33-5p 2R - 23544832 23544921 3'utr wmd FlyBase G19673.1 ATATTCCAACGCTGAACTCTCTCATTGGCATTAAATGATAATCACAACACACAAAACTACATTGTGAAATGCAATAGAAATAAATAACTT 29 23544860 0.713735031 9 29 152 1 1.681241237 0.104166667 0.448275862 0.666666667 29 0 0 48 2R:23544832-23544921 7 21 894 FBgn0034876 541.5 41.29666667 63.21666667 0.038781163 0.508515619 0.332190878 6 6 6 0.25 dme-miR-8-3p 7mer-m8 CAGTATT 2R 23598763 23598769 + 2R_23598763_23598769_+ 0.655028084 0.642075003 0.648551544 0.009159225 apt FBtr0072069|FBtr0072067|FBtr0332926|FBtr0072068|FBtr0072066|FBtr0072070 23598526|23598526|23598526|23598526|23598526|23598526 23599526|23599526|23599526|23599526|23599526|23599526 2R + 23598741 23598784 3'utr apt FlyBase G18592.1 AGACATTCCTGGCATTGTTGATCAGTATTTGAAAGCTAGAAGCG 10 23598761 0.725171402 4 10 98 1 1 0.5 0 0 10 0 0 10 2R:23598741-23598784 7 apt FBtr0072066|FBtr0072070|FBtr0332926|FBtr0072068|FBtr0072069|FBtr0072067 23598526|23598526|23598526|23598526|23598526|23598526 23599526|23599526|23599526|23599526|23599526|23599526 CAGTATT 7mer-m8 dme-miR-8-3p 2R + 23598749 23598775 3'utr apt FlyBase G14139.1 CTGGCATTGTTGATCAGTATTTGAAAG 8 23598762 0.730993826 2 6 60 0.75 0.954242509 0.083333333 0.5 0.666666667 8 3 0 9 2R:23598749-23598775 7 9 895 FBgn0015903 402.1966667 17.62666667 27.31666667 0.022377112 0.510590015 0.329469189 2 1 1.5 0.25 dme-miR-1003-3p 7mer-m8 ATGTGAG 2R 23679150 23679156 + 2R_23679150_23679156_+ 0.568491145 0.602048819 0.585269982 0.023728877 Pde8 FBtr0344184|FBtr0344179|FBtr0344182|FBtr0344178|FBtr0344183|FBtr0344177|FBtr0344176 23678688|23678688|23678688|23678688|23678688|23678688|23678688 23680017|23680017|23680844|23680844|23680844|23680017|23680017 2R + 23679125 23679177 3'utr Pde8 FlyBase G18601.1 ATTTCTATATATAACTATATAAACCATGTGAGTCTGTGTGTGCGTGAGTGTGT 13 23679160 0.988846229 6 10 102 0.833333333 1.176091259 0.611111111 0.307692308 0.5 13 3 0 15 2R:23679125-23679177 7 Pde8 FBtr0344182|FBtr0344178|FBtr0344183|FBtr0344176|FBtr0344177|FBtr0344184|FBtr0344179 23678688|23678688|23678688|23678688|23678688|23678688|23678688 23680844|23680844|23680844|23680017|23680017|23680017|23680017 ATGTGAG 7mer-m8 dme-miR-1003-3p 2R + 23679137 23679169 3'utr Pde8 FlyBase G14146.1 AACTATATAAACCATGTGAGTCTGTGTGTGCGT 9 23679153 0.742106882 4 8 62 0.941176471 1.204119983 0.705882353 0.555555556 0.764705882 9 1 0 16 2R:23679137-23679169 7 10.5 896 FBgn0266377 2144.47 62.20666667 95.11333333 0.004896315 0.168792198 0.110394617 -10 -3 -6.5 0.25 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG 2R 23679333 23679339 + 2R_23679333_23679339_+ 0.395721773 0.451382308 0.42355204 0.039357917 Pde8 FBtr0344184|FBtr0344179|FBtr0344182|FBtr0344178|FBtr0344183|FBtr0344177|FBtr0344176 23678688|23678688|23678688|23678688|23678688|23678688|23678688 23680017|23680017|23680844|23680844|23680844|23680017|23680017 2R + 23679294 23679355 3'utr Pde8 FlyBase G18602.1 CACAGCATATTGACCAGATCATATGGCGTGCGCTCCACTGTACCTGGCAACGGTATAATGTA 163 23679332 0.968632819 5 158 876 0.97311828 2.257678575 0.123655914 0.128834356 0.23655914 163 5 0 181 2R:23679294-23679355 7 Pde8 FBtr0344182|FBtr0344178|FBtr0344183|FBtr0344176|FBtr0344177|FBtr0344184|FBtr0344179 23678688|23678688|23678688|23678688|23678688|23678688|23678688 23680844|23680844|23680844|23680017|23680017|23680017|23680017 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" 2R + 23679305 23679350 3'utr Pde8 FlyBase G14147.1 GACCAGATCATATGGCGTGCGCTCCACTGTACCTGGCAACGGTATA 102 23679332 0.806597499 4 99 550 0.967320261 2.170261715 0.124183007 0.401960784 0.60130719 102 5 0 148 2R:23679305-23679350 7 131 897 FBgn0266377 2144.47 62.20666667 95.11333333 0.061087355 2.105883614 1.377304269 1 1 1 0.25 dme-miR-12-5p 6mer2-7 ATACTC 2R 23699399 23699404 - 2R_23699399_23699404_- 0.578632628 0.929689557 0.754161092 0.248234785 CG4091 FBtr0072097|FBtr0072096|FBtr0072098 23698947|23698947|23698947 23699964|23699964|23699964 2R - 23699375 23699423 3'utr CG4091 FlyBase G26028.1 ATTCGTGGTCTACTTTTTGATACTCCCAAACTCGCTGTGTGCACCCGCA 19 23699406 0.815683846 6 17 115 0.916666667 1.342422681 0.166666667 0.210526316 0.375 19 2 0 22 2R:23699375-23699423 6 CG4091 FBtr0072096|FBtr0072098|FBtr0072097 23698947|23698947|23698947 23699964|23699964|23699964 ATACTC 6mer2-7 dme-miR-12-5p 2R - 23699368 23699422 3'utr CG4091 FlyBase G19695.1 TTCGTGGTCTACTTTTTGATACTCCCAAACTCGCTGTGTGCACCCGCAAGTAACT 10 23699407 0.987895681 5 10 79 1 1.230448921 0.529411765 0.4 0.647058824 10 0 0 17 2R:23699368-23699422 6 12.5 898 FBgn0034894 369.3166667 23.85666667 36.49333333 0.033846293 0.523962554 0.342528316 2 3 2.5 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 2R 23699570 23699575 - 2R_23699570_23699575_- 0.992647215 0.949735439 0.971191327 0.030343225 CG4091 FBtr0072097|FBtr0072096|FBtr0072098 23698947|23698947|23698947 23699964|23699964|23699964 2R - 23699517 23699603 3'utr CG4091 FlyBase G26029.1 ATAATTAGGAAGAACCAAATGCATTTCGCCAAAGGAATTCACTAAACGGAAATTGTAAACTCGAGCAAAATGCTTTTATCGGTGTGT 16 23699582 0.718025162 10 13 79 0.777777778 1.146128036 0.055555556 0.125 0.222222222 16 4 0 14 2R:23699517-23699603 6 CG4091 FBtr0072096|FBtr0072098|FBtr0072097 23698947|23698947|23698947 23699964|23699964|23699964 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 23699520 23699597 3'utr CG4091 FlyBase G19696.1 AGGAAGAACCAAATGCATTTCGCCAAAGGAATTCACTAAACGGAAATTGTAAACTCGAGCAAAATGCTTTTATCGGTG 8 23699566 0.999137843 4 7 24 1 1 0.1 0.125 0.3 8 0 0 10 2R:23699520-23699597 6 6.5 899 FBgn0034894 369.3166667 23.85666667 36.49333333 0.017600072 0.272460528 0.178114724 7 -9 -1 0.25 dme-miR-33-5p 8mer-A1 CAATGCAA 2R 23735298 23735305 - 2R_23735298_23735305_- 0.62640921 0.625880738 0.626144974 0.000373706 egl FBtr0114586|FBtr0343272 23734902|23734902 23735574|23735574 2R - 23735294 23735324 3'utr egl FlyBase G26042.1 AACAATCGACAAATCGTGGCAATGCAATCTT 7 23735309 0.680310251 3 6 36 0.875 0.84509804 0 0.142857143 0.25 7 1 0 7 2R:23735294-23735324 8 egl FBtr0114586|FBtr0343272 23734902|23734902 23735574|23735574 CAATGCAA 8mer-A1 dme-miR-33-5p 2R - 23735289 23735325 3'utr egl FlyBase G19706.1 TAACAATCGACAAATCGTGGCAATGCAATCTTACCGA 8 23735309 0.70124795 5 8 43 1 1.204119983 0 0.75 0.875 8 0 0 16 2R:23735289-23735325 8 7.5 900 FBgn0000562 583.3166667 16.09333333 24.84 0.01285751 0.466031483 0.301932367 4 4 4 0.25 dme-miR-304-5p 6mer3-8 TGAGAT 2R 23811416 23811421 - 2R_23811416_23811421_- 0.980943795 0.655774408 0.818359102 0.229929488 Nxt1 FBtr0343270 23811319 23811686 2R - 23811371 23811506 3'utr Nxt1 FlyBase G26072.1 ACGCAAATTTCAGCAGACTTTCATCGTTACCGCCGAGAATGATAAATGGAAGGTCGTCTCCGATTGCTACCGAATGCAGGAGGTCTGAGATCCACACACTTGTATTTTAAGCTAAGCTAAAGTTCTTACGTCGTAA 17 23811405 0.973029836 10 17 101 1 1.361727836 0.173913043 0.235294118 0.434782609 17 0 0 23 2R:23811371-23811506 6 Nxt1 FBtr0343270 23811319 23811686 TGAGAT 6mer3-8 dme-miR-304-5p 2R - 23811370 23811435 3'utr Nxt1 FlyBase G19726.1 GAATGCAGGAGGTCTGAGATCCACACACTTGTATTTTAAGCTAAGCTAAAGTTCTTACGTCGTAAC 11 23811405 0.967848707 5 11 61 1 1.255272505 0.611111111 0.272727273 0.555555556 11 0 0 18 2R:23811370-23811435 6 5 901 FBgn0028411 120.6666667 31.62 48.83333333 0.041436464 0.158127767 0.102389078 -16 -16 -16 0.25 dme-miR-276a-3p 6mer3-8 AGTTCC 2R 23841612 23841617 - 2R_23841612_23841617_- 0.707551599 0.678918282 0.69323494 0.020246801 shu FBtr0072237 23841459 23841694 2R - 23841528 23841669 3'utr shu FlyBase G26083.1 ATATTTCATATCTTACTCAAAAAAAAAAACATACCAAACATGAAGGTAATTTAGTTCCAAGTTCTAGAAGAGCAGTATCATTAGTTATTTCGATATTAGCAACATGAATATCGTAAGCCCAGACGAATGTTAACGTTTTTTG 171 23841619 0.983912788 14 166 1308 0.974226804 1.975431809 0.128865979 0.116959064 0.221649485 171 4 1 189 2R:23841528-23841669 6 shu FBtr0072237 23841459 23841694 AGTTCC 6mer3-8 dme-miR-276a-3p 2R - 23841592 23841651 3'utr shu FlyBase G19735.1 AAAAAAAAAAACATACCAAACATGAAGGTAATTTAGTTCCAAGTTCTAGAAGAGCAGTAT 102 23841619 0.986593798 7 91 743 0.920529801 2.1430148 0.185430464 0.392156863 0.589403974 102 12 0 139 2R:23841592-23841651 6 113.5 902 FBgn0003401 190.3333333 13.83333333 21.23 0.596322242 8.204819277 5.346208196 2 2 2 0.25 dme-miR-317-3p 8mer-A1 TGTGTTCA 2R 23846904 23846911 + 2R_23846904_23846911_+ 0.629576031 0.629289175 0.629432603 0.000202798 CG5554 FBtr0343273|FBtr0072126 23846588|23846588 23847024|23847024 2R + 23846848 23846924 3'utr CG5554 FlyBase G18643.1 AACTAAATGTAACTTTAGTCGTATATTTTTACCTTTTGCCAAGCATTTTTGTATTTTGTGTTCAACTTGGTTTCCAC 46 23846903 0.993718318 9 45 576 0.966666667 1.763427994 0.15 0.239130435 0.416666667 46 2 0 58 2R:23846848-23846924 8 CG5554 FBtr0343273|FBtr0072126 23846588|23846588 23847024|23847024 TGTGTTCA 8mer-A1 dme-miR-317-3p 2R + 23846864 23846925 3'utr CG5554 FlyBase G14184.1 AGTCGTATATTTTTACCTTTTGCCAAGCATTTTTGTATTTTGTGTTCAACTTGGTTTCCACA 31 23846903 0.711980043 6 30 344 0.973684211 1.568201724 0.236842105 0.193548387 0.342105263 31 1 0 37 2R:23846864-23846925 8 33 903 FBgn0034914 870.3333333 68.06 104.0466667 0.037916507 0.484866294 0.317165375 1 1 1 0.25 dme-miR-79-3p 6mer3-8 TAGCTT 2R 23859488 23859493 - 2R_23859488_23859493_- 0.884597063 0.807574967 0.846086015 0.054462849 TBPH FBtr0089626 23859328 23859744 2R - 23859463 23859555 stop_codon TBPH FlyBase G26105.1 CTTTCTTTAAGGCGGTGCCTGTCACCCAATGATGTGGTTAATGTGGTTAACCAACACCTCTGTAGCTTACTTAAATTTACATATATGTATTCC 33 23859495 0.982081056 11 32 242 0.976190476 1.612783857 0.071428571 0.151515152 0.333333333 33 1 0 41 2R:23859463-23859555 6 TBPH FBtr0089626 23859328 23859744 TAGCTT 6mer3-8 dme-miR-79-3p 2R - 23859484 23859546 stop_codon TBPH FlyBase G19747.1 AGGCGGTGCCTGTCACCCAATGATGTGGTTAATGTGGTTAACCAACACCTCTGTAGCTTACTT 13 23859495 0.888250542 6 11 87 0.9 1.255272505 0.15 0.384615385 0.6 13 2 0 18 2R:23859484-23859546 6 11 904 FBgn0025790 517.66 26.73666667 41.05666667 0.021249469 0.411420022 0.267922384 2 2 2 0.25 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 2R 23866617 23866623 + 2R_23866617_23866623_+ 0.619447129 0.615465258 0.617456193 0.002815558 CG5569 FBtr0072128 23866579 23866654 2R + 23866593 23866641 3'utr CG5569 FlyBase G18658.1 ACATCTAATGATTGTTTGAAAGGCTGGTGCTCTGTTAGAAATTAAACTG 27 23866618 0.753833411 8 26 220 0.965517241 1.146128036 0.172413793 0.074074074 0.137931034 27 0 1 28 2R:23866593-23866641 7 CG5569 FBtr0072128 23866579 23866654 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 2R + 23866598 23866641 3'utr CG5569 FlyBase G14196.1 TAATGATTGTTTGAAAGGCTGGTGCTCTGTTAGAAATTAAACTG 19 23866620 0.681212384 6 17 144 0.931034483 1.130333768 0.137931034 0.421052632 0.620689655 19 1 1 27 2R:23866598-23866641 7 23 905 FBgn0034919 94.64666667 15.64666667 23.91333333 0.243009086 1.469961653 0.961806524 -1 -3 -2 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2R 23877307 23877312 + 2R_23877307_23877312_+ 0.942437622 0.944500571 0.943469096 0.001458761 ken FBtr0072129 23876776 23877442 2R + 23877234 23877339 3'utr ken FlyBase G18671.1 TGTCTATACGAGAGGTATTTTAATTGCTATTGTATTTCCAACTCGTCTAGCATGAACTTCATGGCCCAAACTTGTACCTATATCTACATTTTTGATAGTTTTGATA 222 23877306 0.980806451 16 213 1585 0.969465649 2.103803721 0.022900763 0.153153153 0.282442748 222 7 1 254 2R:23877234-23877339 6 ken FBtr0072129 23876776 23877442 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2R + 23877257 23877337 3'utr ken FlyBase G14210.1 TTGCTATTGTATTTCCAACTCGTCTAGCATGAACTTCATGGCCCAAACTTGTACCTATATCTACATTTTTGATAGTTTTGA 138 23877306 0.787548952 10 134 931 1 2.334453751 0.046296296 0.427536232 0.634259259 138 0 0 216 2R:23877257-23877337 6 161.5 906 FBgn0011236 845.1733333 33.37333333 51.22333333 0.191085063 4.839192968 3.152860025 1 1 1 0.25 dme-miR-34-5p 7mer-A1 ACTGCCA 2R 23896809 23896815 + 2R_23896809_23896815_+ 0.550970425 0.46316586 0.507068142 0.062087157 CG17658 FBtr0072133 23896698 23896997 2R + 23896789 23896827 3'utr CG17658 FlyBase G18680.1 ATATTCTAAGTTACCTGATTACTGCCACAAGTATCAAGT 7 23896807 0.972159745 2 7 47 1 1.176091259 0.333333333 0.571428571 0.8 7 0 0 15 2R:23896789-23896827 7 CG17658 FBtr0072133 23896698 23896997 ACTGCCA 7mer-A1 dme-miR-34-5p 2R + 23896789 23896861 3'utr CG17658 FlyBase G14216.1 ATATTCTAAGTTACCTGATTACTGCCACAAGTATCAAGTTAGATGCATTAAAACTACCCAAGACTGTAGAATA 10 23896807 0.857858643 4 10 58 1 1.255272505 0.111111111 0.5 0.722222222 10 0 0 18 2R:23896789-23896861 7 6 907 FBgn0034924 26.68 1.76 2.723333333 0.224887556 3.409090909 2.203182375 2 2 2 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 23896961 23896966 - 2R_23896961_23896966_- 0.811021668 0.99992295 0.905472309 0.133573319 CG5339 FBtr0072220 23896894 23897117 2R - 23896930 23896983 3'utr CG5339 FlyBase G26145.1 TTTATTCTTAAAGAATTACCAAAAATGTAAATGGATAAACAAACATGTTTAAAT 11 23896967 0.985968869 2 9 77 0.846153846 1.041392685 0 0.181818182 0.307692308 11 2 0 11 2R:23896930-23896983 6 CG5339 FBtr0072220 23896894 23897117 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 23896940 23896974 3'utr CG5339 FlyBase G19772.1 AAAGAATTACCAAAAATGTAAATGGATAAACAAAC 5 23896967 0.614491343 3 4 22 1 0.903089987 0 0.4 0.625 5 0 0 8 2R:23896940-23896974 6 7.5 908 FBgn0034925 184.9866667 18.32333333 27.93333333 0.040543463 0.409314171 0.26849642 1 1 1 0.25 dme-miR-277-3p 7mer-A1 GCATTTA 2R 23897022 23897028 - 2R_23897022_23897028_- 0.748708762 0.787735096 0.768221929 0.027595761 CG5339 FBtr0072220 23896894 23897117 2R - 23896994 23897098 3'utr CG5339 FlyBase G26146.1 AAAAAGAACCCTTCTGAAGTTATTGTAACCGTTTTCCTCGTAGAGTTAAGTGGCTGCATTGAGAAACTGAGCATTTATACTTATTACAAATGTAGGCTATCAACT 30 23897031 0.957571383 15 29 229 0.96969697 1.505149978 0.242424242 0.1 0.181818182 30 1 0 32 2R:23896994-23897098 7 CG5339 FBtr0072220 23896894 23897117 GCATTTA 7mer-A1 dme-miR-277-3p 2R - 23896996 23897098 3'utr CG5339 FlyBase G19773.1 AAAAAGAACCCTTCTGAAGTTATTGTAACCGTTTTCCTCGTAGAGTTAAGTGGCTGCATTGAGAAACTGAGCATTTATACTTATTACAAATGTAGGCTATCAA 14 23897031 0.978847474 9 14 97 1 1.301029996 0.1 0.285714286 0.5 14 0 0 20 2R:23896996-23897098 7 10.5 909 FBgn0034925 184.9866667 18.32333333 27.93333333 0.056760848 0.57303984 0.375894988 3 3 3 0.25 dme-miR-932-5p 7mer-A1 GAATTGA 2R 23928036 23928042 - 2R_23928036_23928042_- 0.771373616 0.764453701 0.767913658 0.004893108 Ca-P60A FBtr0072216 23927480 23929230 2R - 23928027 23928109 3'utr Ca-P60A FlyBase G26161.1 TCTATAGAATACCTACTTAAATTAACATTATACATAATTTACTCTGTTATACAATTAGAGACGCTGTGAATTGATTAAACAAA 38 23928055 0.792681964 11 33 252 0.862745098 1.166331422 0.078431373 0.210526316 0.411764706 38 5 2 44 2R:23928027-23928109 7 Ca-P60A FBtr0072216 23927480 23929230 GAATTGA 7mer-A1 dme-miR-932-5p 2R - 23928025 23928087 3'utr Ca-P60A FlyBase G19785.1 TAACATTATACATAATTTACTCTGTTATACAATTAGAGACGCTGTGAATTGATTAAACAAAAA 36 23928039 0.941945151 8 33 224 0.945454545 1.716003344 0.036363636 0.388888889 0.6 36 3 0 52 2R:23928025-23928087 7 31 910 FBgn0263006 3996.03 108.55 166.07 0.0077577 0.285582681 0.186668272 13 -3 5 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 2R 23928916 23928921 - 2R_23928916_23928921_- 0.999999318 0.999464439 0.999731878 0.000378231 Ca-P60A FBtr0072216 23927480 23929230 2R - 23928902 23928945 3'utr Ca-P60A FlyBase G26166.1 CGTATACCCTACCCTATAGATATCTGTGTTTGTATATTACTATA 17 23928923 0.780194526 7 15 169 0.916666667 1.342422681 0.041666667 0.411764706 0.583333333 17 2 0 22 2R:23928902-23928945 6 Ca-P60A FBtr0072216 23927480 23929230 TGTGTT 6mer3-8 dme-miR-317-3p 2R - 23928906 23928945 3'utr Ca-P60A FlyBase G19788.2 CGTATACCCTACCCTATAGATATCTGTGTTTGTATATTAC 12 23928915 0.680136648 5 9 110 0.833333333 1.176091259 0 0.333333333 0.555555556 12 3 0 15 2R:23928906-23928945 6 12.5 911 FBgn0263006 3996.03 108.55 166.07 0.003128105 0.115154307 0.075269465 2 -6 -2 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 23946865 23946872 + 2R_23946865_23946872_+ 0.624725225 0.623337281 0.624031253 0.000981394 Galphas FBtr0072142|FBtr0343279|FBtr0072143|FBtr0072144|FBtr0301411 23946746|23946746|23946746|23946746|23946746 23946936|23946936|23946936|23946936|23946936 2R + 23946851 23946892 3'utr Galphas FlyBase G18723.1 AACAAAAAATTCGCTGCATTTAGATCTGGTATGACCTTTCAC 7 23946863 0.856928223 6 6 45 0.933333333 1.146128036 0.133333333 0.571428571 0.8 7 1 0 14 2R:23946851-23946892 8 Galphas FBtr0072144|FBtr0072143|FBtr0343279|FBtr0072142|FBtr0301411 23946746|23946746|23946746|23946746|23946746 23946936|23946936|23946936|23946936|23946936 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 23946854 23946881 3'utr Galphas FlyBase G14247.1 AAAAAATTCGCTGCATTTAGATCTGGTA 5 23946860 0.837023196 3 4 34 0.666666667 0.77815125 0 0.4 0.666666667 5 3 0 6 2R:23946854-23946881 8 5.5 912 FBgn0001123 1422.84 105.62 161.5433333 0.003865508 0.052073471 0.034046592 2 5 3.5 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 24020208 24020213 - 2R_24020208_24020213_- 0.999996242 0.996062516 0.998029379 0.002781546 CG3907 FBtr0072195|FBtr0072196 24019896|24019896 24020237|24020237 2R - 24020149 24020323 lincRNA_intron-lincRNA_exon CG3907 FlyBase G26230.1 AGCCCGAAGCGATTGCCGTCAAGCAGGAAGTCATAAAGCCGTCTGCAAATGCTACAGTGAAGCTTCAGGAATCCTTGAAGCTGTAAGCTGCTGCATTGCTGCGTTGTATTACCAAATTTGTTCGATTCCGTATTTAGCCATTAAGACCTCATGGATTCCATGTGTCCGAGTTACA 83 24020198 0.881809046 27 78 648 0.951923077 1.995635195 0.201923077 0.192771084 0.355769231 83 5 0 99 2R:24020149-24020323 6 CG3907 FBtr0072195|FBtr0072196 24019896|24019896 24020237|24020237 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 24020142 24020252 stop_codon CG3907 FlyBase G19836.1 TCCTTGAAGCTGTAAGCTGCTGCATTGCTGCGTTGTATTACCAAATTTGTTCGATTCCGTATTTAGCCATTAAGACCTCATGGATTCCATGTGTCCGAGTTACAGCCAACG 48 24020206 0.931047451 19 45 409 0.972222222 1.84509804 0.277777778 0.291666667 0.527777778 48 2 0 70 2R:24020142-24020252 6 27.5 913 FBgn0034958 1493.146667 107.1866667 164.3533333 0.018417481 0.256561761 0.167322435 -15 -7 -11 0.25 dme-miR-34-5p 6mer2-7 ACTGCC 2R 24031590 24031595 - 2R_24031590_24031595_- 0.682893892 0.695654853 0.689274373 0.00902339 Chi FBtr0072192|FBtr0072191 24031536|24031536 24031803|24031803 2R - 24031578 24031625 3'utr Chi FlyBase G26246.1 AAACCGTAGGATACTTCTGTTCTTGTCTTGACTGCCTTGCAAAGTACT 29 24031599 0.650413198 8 26 273 0.921052632 1.544068044 0.078947368 0.24137931 0.421052632 29 3 0 35 2R:24031578-24031625 6 Chi FBtr0072192|FBtr0072191 24031536|24031536 24031803|24031803 ACTGCC 6mer2-7 dme-miR-34-5p 2R - 24031560 24031613 3'utr Chi FlyBase G19846.1 ACTTCTGTTCTTGTCTTGACTGCCTTGCAAAGTACTTAATGTGTTGTTTTAGTA 25 24031600 0.970228801 9 23 252 0.897435897 1.544068044 0.179487179 0.44 0.641025641 25 4 0 35 2R:24031560-24031613 6 25.5 914 FBgn0013764 624.9866667 35.29333333 53.78666667 0.04080087 0.722516056 0.474095191 4 5 4.5 0.25 dme-miR-305-5p 7mer-m1 GTACAAT 2R 24044373 24044379 + 2R_24044373_24044379_+ 0.761228445 0.765586609 0.763407527 0.003081713 IntS1 FBtr0072168 24044337 24044458 2R + 24044344 24044384 3'utr IntS1 FlyBase G18814.2 CGGTCTATAAGTTAGAACCGTCATCATATGTACAATGTAAT 10 24044369 0.597909211 5 9 57 1 1.113943352 0.153846154 0.3 0.461538462 10 0 0 13 2R:24044344-24044384 7 IntS1 FBtr0072168 24044337 24044458 GTACAAT 7mer-m1 dme-miR-305-5p 2R + 24044353 24044384 3'utr IntS1 FlyBase G14309.1 AGTTAGAACCGTCATCATATGTACAATGTAAT 8 24044368 0.640308137 3 8 54 1 1.041392685 0.090909091 0.25 0.454545455 8 0 0 11 2R:24044353-24044384 7 8 915 FBgn0034964 864.9966667 16.29666667 25.03666667 0.009248591 0.490897934 0.319531354 4 5 4.5 0.25 dme-miR-282-5p 7mer-A1 GAGGCTA 2R 24052999 24053005 + 2R_24052999_24053005_+ 0.741178555 0.741396411 0.741287483 0.000154008 sei FBtr0343342|FBtr0072169|FBtr0072170 24052939|24052939|24052939 24053035|24053035|24053035 2R + 24052982 24053014 3'utr sei FlyBase G18820.1 TGTGCACAAGCTGTTGCGAGGCTAAAGAGCGAA 21 24052996 0.707925865 2 21 71 1 1.361727836 0.304347826 0.047619048 0.130434783 21 0 0 23 2R:24052982-24053014 7 sei FBtr0072170|FBtr0343342|FBtr0072169 24052939|24052939|24052939 24053035|24053035|24053035 GAGGCTA 7mer-A1 dme-miR-282-5p 2R + 24052982 24053015 3'utr sei FlyBase G14312.1 TGTGCACAAGCTGTTGCGAGGCTAAAGAGCGAAA 17 24052996 0.721416372 2 17 62 1 1.380211242 0.666666667 0.411764706 0.583333333 17 0 0 24 2R:24052982-24053015 7 19 916 FBgn0003353 165.25 6.316666667 9.546666667 0.114977307 3.007915567 1.990223464 3 3 3 0.25 dme-bantam-3p 8mer-A1 TGATCTCA 2R 24089378 24089385 + 2R_24089378_24089385_+ 0.629908303 0.615647347 0.622777825 0.01008405 snama FBtr0307174 24089270 24089512 2R + 24089309 24089420 3'utr snama FlyBase G18849.1 GATCGAGTCAAGTGTCGAGGCCACTGGAACTCCGAGGTGTTGACGAGTCCATACGCAGCCGGTCCTGCCTGATCTCAATATTTTTAAGTTCCAACAGAGACTATACACACAC 48 24089376 0.982996232 13 45 341 0.927272727 1.40654018 0.054545455 0.145833333 0.254545455 48 3 1 51 2R:24089309-24089420 8 snama FBtr0307174 24089270 24089512 TGATCTCA 8mer-A1 dme-bantam-3p 2R + 24089337 24089420 3'utr snama FlyBase G14345.1 ACTCCGAGGTGTTGACGAGTCCATACGCAGCCGGTCCTGCCTGATCTCAATATTTTTAAGTTCCAACAGAGACTATACACACAC 27 24089377 0.987153797 7 23 201 0.844444444 1.579783597 0 0.481481481 0.688888889 27 7 0 38 2R:24089337-24089420 8 27.5 917 FBgn0086129 1271.946667 47.64 73.46 0.021620403 0.577246012 0.37435339 2 1 1.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 24127704 24127710 - 2R_24127704_24127710_- 0.661615402 0.507279512 0.584447457 0.109131961 tamo FBtr0072282|FBtr0072281|FBtr0343438 24126636|24126636|24127142 24127812|24127812|24127812 2R - 24127677 24127745 3'utr tamo FlyBase G26309.1 ACGACCAATGTAAGCCTGTGCGCGTGTCTCTAAGATCTAGTCTCGATCGAAGTCGTCGTTCGATGGCAG 22 24127710 0.674359391 9 19 141 0.870967742 1.431363764 0.290322581 0.363636364 0.548387097 22 4 0 27 2R:24127677-24127745 7 tamo FBtr0072282|FBtr0072281|FBtr0343438 24126636|24126636|24127142 24127812|24127812|24127812 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R - 24127655 24127745 3'utr tamo FlyBase G19899.1 ACGACCAATGTAAGCCTGTGCGCGTGTCTCTAAGATCTAGTCTCGATCGAAGTCGTCGTTCGATGGCAGGCAGCCCTTTGTCATCCGCATT 14 24127710 0.877752855 8 12 103 0.888888889 0.903089987 0.333333333 0.142857143 0.333333333 14 1 1 16 2R:24127655-24127745 7 8.5 918 FBgn0041582 428.8966667 12.44 19.01333333 0.019818293 0.683279743 0.447054698 0 0 0 0.25 dme-miR-33-5p 8mer-A1 CAATGCAA 2R 24264882 24264889 + 2R_24264882_24264889_+ 0.493206073 0.415052624 0.454129348 0.05526287 CG3376 FBtr0072265 24264348 24265213 2R + 24264853 24265208 3'utr CG3376 FlyBase G18961.4 TGGTCGTTTGAGGTCATCCAACTGCAAGTCAATGCAATCGCAACGAAGGAAAACTCCTACCCCATAAGCTTACTATGTGATAACTAGTGCTTAAAACCATTTCGCTTAGTGTACGTTAACGCAATGATGTCCCAAAACTGCCTGCTTTGAAACCTTACAATCGCCCTTCGGAATCTGAGTCAGTGAAGAATAGTCATTTATCTGTAATCGAGTCGATGCTGTTGCCCACTCCGCAGCATTTGCGGTCGTGGCATGTTGCGCGCTTTTACGCAATGGAAATTGTCGAGCAAATTACCTTCTAAGACACCTAATTGTAAAGCTAACCTAGGTCTTAACTTAAATAAAGTGCAATTATT 255 24264881 0.974749414 47 237 1375 0.920127796 1.857332496 0.309904153 0.192156863 0.341853035 255 22 3 288 2R:24264853-24265208 8 CG3376 FBtr0072265|FBtr0343442 24264348|24264838 24265213|24265213 CAATGCAA 8mer-A1 dme-miR-33-5p 2R + 24264851 24264963 3'utr CG3376 FlyBase G14427.2 GATGGTCGTTTGAGGTCATCCAACTGCAAGTCAATGCAATCGCAACGAAGGAAAACTCCTACCCCATAAGCTTACTATGTGATAACTAGTGCTTAAAACCATTTCGCTTAGTG 93 24264881 0.923431083 14 79 385 0.869565217 1.037788561 0.326086957 0.344086022 0.557971014 93 8 10 120 2R:24264851-24264963 8 70.5 919 FBgn0034997 1791.34 62.30666667 94.61 0.039356013 1.131500107 0.745164359 1 1 1 0.25 dme-miR-1006-3p 8mer-A1 CGAATTTA 2R 24312766 24312773 + 2R_24312766_24312773_+ 0.543097139 0.601229289 0.572163214 0.041105673 betaTub60D FBtr0072270|FBtr0343443 24312146|24312146 24313099|24313099 2R + 24312675 24312853 3'utr betaTub60D FlyBase G18982.1 AACCCCAAGTTATCCCACGTCATTCTTATACTACTATTTATATCGCAACGTCAGCAGAAGGACCACAAGTATCTAGTATTGCAAAGGATATCGAATTTATGCAGAAATCTCAAAACGAGAATGTCCAGCGTCTAGGAAGTCGGCACTCAAGACTTGGCGGCACTTACGTTTAGGGCTAT 110 24312765 0.968301615 22 105 645 0.94488189 2.079181246 0.212598425 0.145454545 0.25984252 110 7 0 120 2R:24312675-24312853 8 betaTub60D FBtr0343443|FBtr0072270 24312146|24312146 24313099|24313099 CGAATTTA 8mer-A1 dme-miR-1006-3p 2R + 24312670 24312786 3'utr betaTub60D FlyBase G14446.1 TTCATAACCCCAAGTTATCCCACGTCATTCTTATACTACTATTTATATCGCAACGTCAGCAGAAGGACCACAAGTATCTAGTATTGCAAAGGATATCGAATTTATGCAGAAATCTCA 54 24312748 0.965927473 16 50 287 0.934065934 1.452297671 0.131868132 0.518518519 0.714285714 54 4 2 85 2R:24312670-24312786 8 27 920 FBgn0003888 691.4333333 33.13333333 50.45333333 0.039049318 0.814889336 0.535147992 1 18 9.5 0.25 dme-miR-1003-3p 6mer2-7 TGTGAG 2R 24392317 24392322 - 2R_24392317_24392322_- 0.956290858 0.884075951 0.920183405 0.051063645 slik FBtr0072366|FBtr0332925|FBtr0072364 24392127|24392127|24392127 24393053|24393053|24393053 2R - 24392173 24392367 3'utr slik FlyBase G26328.1 AACAGAAGAAATATGTGAGATGTTGGGATTCCATGAAACAAATTGTGTGAGCGCTCGAGTTTTGAGCTGCAGACGGACGTAGATATGCAGATCGATAATGAGGGGCCGTCGGGTAACAGTAAACGATATTTATATTTGTACAAGTTTATGCTTATATATTTTATATAAATATATATATATATATTTAAAATAAAC 45 24392325 0.983309584 18 44 281 0.981818182 1.73239376 0.381818182 0.2 0.345454545 45 1 0 54 2R:24392173-24392367 6 slik FBtr0332925|FBtr0072364|FBtr0072366 24392127|24392127|24392127 24393053|24393053|24393053 TGTGAG 6mer2-7 dme-miR-1003-3p 2R - 24392210 24392416 3'utr slik FlyBase G19913.1 AGAGACAGAGACACATCCACGGAAAGTTTAGCAAAAGTTAATGTGTAGCAACAGAAGAAATATGTGAGATGTTGGGATTCCATGAAACAAATTGTGTGAGCGCTCGAGTTTTGAGCTGCAGACGGACGTAGATATGCAGATCGATAATGAGGGGCCGTCGGGTAACAGTAAACGATATTTATATTTGTACAAGTTTATGCTTATATA 33 24392325 0.973928813 16 32 196 0.962264151 1.707570176 0.377358491 0.393939394 0.622641509 33 2 0 51 2R:24392210-24392416 6 13 921 FBgn0035001 5352.49 110.13 168.49 0.002428776 0.118042314 0.077155914 3 3 3 0.25 dme-miR-33-5p 7mer-m8 CAATGCA 2R 24404714 24404720 - 2R_24404714_24404720_- 0.601355639 0.61198463 0.606670134 0.007515838 SerT FBtr0072362|FBtr0343316 24404593|24404593 24405451|24405451 2R - 24404700 24404736 3'utr SerT FlyBase G26370.1 TAGAGAACGCCCTGTACAATGCATTACTCAACCGTTT 26 24404713 0.720391733 5 26 126 1 1.531478917 0.176470588 0.192307692 0.382352941 26 0 0 34 2R:24404700-24404736 7 SerT FBtr0072362|FBtr0343316 24404593|24404593 24405451|24405451 CAATGCA 7mer-m8 dme-miR-33-5p 2R - 24404702 24404739 3'utr SerT FlyBase G19950.1 AGATAGAGAACGCCCTGTACAATGCATTACTCAACCGT 14 24404713 0.702134529 5 14 63 1 1.414973348 0.230769231 0.571428571 0.769230769 14 0 0 26 2R:24404702-24404739 7 19.5 922 FBgn0010414 3 0.116666667 0.176666667 6.5 167.1428571 110.3773585 -7 -7 -7 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2R 24414144 24414150 + 2R_24414144_24414150_+ 0.557400133 0.499385472 0.528392802 0.041022517 CG45068 FBtr0344430 24414110 24415295 2R + 24414096 24414169 stop_codon CG45068 FlyBase G19003.1 GGAAACCGCGGCGTAGTCTTCACTTCTTGGCCAGTCCAAGTGCCTTATACCAAAGTTCTAGGTTAAGATTAACT 42 24414143 0.988669692 7 41 378 0.976744186 1.62324929 0.023255814 0.023809524 0.046511628 42 1 0 42 2R:24414096-24414169 7 CG45068 FBtr0344430 24414110 24415295 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 24414093 24414165 stop_codon CG45068 FlyBase G14462.1 GACGGAAACCGCGGCGTAGTCTTCACTTCTTGGCCAGTCCAAGTGCCTTATACCAAAGTTCTAGGTTAAGATT 23 24414143 0.985142535 6 23 188 1 1.556302501 0.138888889 0.347826087 0.583333333 23 0 0 36 2R:24414093-24414165 7 30 923 FBgn0266438 77.02666667 2.906666667 4.47 0.389475506 10.32110092 6.711409396 1 1 1 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2R 24414289 24414295 + 2R_24414289_24414295_+ 0.802708444 0.771483549 0.787095996 0.022079339 CG45068 FBtr0344430 24414110 24415295 2R + 24414258 24414325 3'utr CG45068 FlyBase G19004.1 GTGCACAGCAAACTTGAAATTTTGAATATGGCTAGTCATTACCAAATATTCCCTTGATCTTAAGATTC 42 24414296 0.973008794 9 36 333 0.905660377 1.204119983 0.018867925 0.142857143 0.320754717 42 3 2 48 2R:24414258-24414325 7 CG45068 FBtr0344430 24414110 24415295 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R + 24414223 24414318 3'utr CG45068 FlyBase G14463.1 TTGTTAAGCTTGACTTCTGTAAACATTCCCAATATGTGCACAGCAAACTTGAAATTTTGAATATGGCTAGTCATTACCAAATATTCCCTTGATCTT 34 24414296 0.984861332 13 30 262 0.879310345 1.707570176 0.051724138 0.5 0.706896552 34 7 0 51 2R:24414223-24414318 7 30.5 924 FBgn0266438 77.02666667 2.906666667 4.47 0.395966765 10.49311927 6.823266219 -7 -7 -7 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 24557543 24557549 + 2R_24557543_24557549_+ 0.557042968 0.540780731 0.54891185 0.011499183 ITP FBtr0290219|FBtr0290219|FBtr0290219 24556424|24556424|24556424 24558961|24558961|24558961 2R + 24557499 24557593 3'utr ITP FlyBase G19028.1 AAAGGATAATCAATCATTCGCTGGCTATTTGAGAGCATCAAAATTGTGATAAATGAGAATTAGAATGCGAATGCGCGACGCAGGACACCGCCAGA 236 24557542 0.970189644 11 222 1268 0.939285714 1.419955748 0.189285714 0.156779661 0.289285714 236 8 9 263 2R:24557499-24557593 7 ITP FBtr0290219|FBtr0290219|FBtr0290219 24556424|24556424|24556424 24558961|24558961|24558961 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 24557491 24557583 3'utr ITP FlyBase G14478.1 AAATTAATAAAGGATAATCAATCATTCGCTGGCTATTTGAGAGCATCAAAATTGTGATAAATGAGAATTAGAATGCGAATGCGCGACGCAGGA 156 24557542 0.969239642 10 148 831 0.946188341 1.421192468 0.174887892 0.314102564 0.520179372 156 5 7 211 2R:24557491-24557583 7 182 925 FBgn0035023 1304.81 56.75666667 87.48 0.13948391 3.206671757 2.080475537 1 1 1 0.25 dme-miR-79-3p 6mer2-7 AGCTTT 2R 24558473 24558478 + 2R_24558473_24558478_+ 0.888974034 0.901149264 0.895061649 0.008609237 ITP FBtr0300186|FBtr0290219 24558137|24556424 24558961|24558961 2R + 24558448 24558492 3'utr ITP FlyBase G19032.1 CATCTGTCATGAAACAGTCTCGTGGAGCTTTTAGTTGTAGTGAAT 12 24558478 0.988365208 8 12 114 1 1.113943352 0.153846154 0.083333333 0.153846154 12 0 0 13 2R:24558448-24558492 6 ITP FBtr0290219|FBtr0300186 24556424|24558137 24558961|24558961 AGCTTT 6mer2-7 dme-miR-79-3p 2R + 24558458 24558492 3'utr ITP FlyBase G14481.1 GAAACAGTCTCGTGGAGCTTTTAGTTGTAGTGAAT 10 24558479 0.610112055 7 9 95 0.933333333 1.146128036 0.4 0.5 0.666666667 10 1 0 14 2R:24558458-24558492 6 11 926 FBgn0035023 1304.81 56.75666667 87.48 0.008430346 0.193809831 0.125743027 -5 -6 -5.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 24558909 24558915 + 2R_24558909_24558915_+ 0.661552653 0.661230544 0.661391599 0.00022783 ITP FBtr0300186|FBtr0290219 24558137|24556424 24558961|24558961 2R + 24558890 24558934 3'utr ITP FlyBase G19035.1 TAATTTAAACTTGTTTGGATCTAGTCGTAAAATATAAATAAAGAT 51 24558907 0.626572594 12 43 451 0.877192982 1.096910013 0.01754386 0.098039216 0.192982456 51 4 3 50 2R:24558890-24558934 7 ITP FBtr0290219|FBtr0300186 24556424|24558137 24558961|24558961 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 24558886 24558938 3'utr ITP FlyBase G14485.1 TAATTAATTTAAACTTGTTTGGATCTAGTCGTAAAATATAAATAAAGATTGTA 31 24558904 0.644614109 12 25 267 0.840909091 1.267171728 0.113636364 0.35483871 0.545454545 31 6 1 37 2R:24558886-24558938 7 39.5 927 FBgn0035023 1304.81 56.75666667 87.48 0.030272607 0.695953486 0.451531779 2 5 3.5 0.25 dme-bantam-3p 6mer3-8 TGATCT 2R 24568160 24568165 - 2R_24568160_24568165_- 0.958547118 0.999012082 0.9787796 0.028613076 Fcp1 FBtr0343489|FBtr0072342 24567985|24567985 24568459|24568459 2R - 24568154 24568185 3'utr Fcp1 FlyBase G26412.1 TGAATCAAAAACTCTCATTCTGATCTAATGTA 9 24568166 0.684736527 4 8 63 0.846153846 1.041392685 0 0.222222222 0.461538462 9 2 0 11 2R:24568154-24568185 6 Fcp1 FBtr0343489|FBtr0072342 24567985|24567985 24568459|24568459 TGATCT 6mer3-8 dme-bantam-3p 2R - 24568128 24568177 3'utr Fcp1 FlyBase G19979.1 AAACTCTCATTCTGATCTAATGTAAATTGAAGCCTACTGTAAATGTAAAT 6 24568165 0.990418314 4 5 46 0.8 0.903089987 0 0.333333333 0.6 6 2 0 8 2R:24568128-24568177 6 6.5 928 FBgn0035026 362.9966667 13.60666667 20.97333333 0.017906501 0.477707006 0.309917355 1 0 0.5 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2R 24577629 24577634 + 2R_24577629_24577634_+ 0.975161002 0.788419615 0.881790308 0.13204611 Start1 FBtr0089868|FBtr0305054|FBtr0089867|FBtr0343485 24577463|24577463|24577260|24577463 24577676|24577676|24577676|24577676 2R + 24577553 24577648 3'utr Start1 FlyBase G19067.1 AATTTGAAGCAGGAGAGCGAGTTCAGTGCTGTAAGTTTATTGAGTATTTTATGTATATGTATGGCATAAGTTCTATGTACCTATATGCACGGCTTA 18 24577628 0.987528605 11 18 158 1 1.342422681 0.227272727 0.166666667 0.318181818 18 0 0 22 2R:24577553-24577648 6 Start1 FBtr0089867|FBtr0343485|FBtr0089868|FBtr0305054 24577260|24577463|24577463|24577463 24577676|24577676|24577676|24577676 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2R + 24577613 24577640 3'utr Start1 FlyBase G14505.1 ATGGCATAAGTTCTATGTACCTATATGC 5 24577628 0.873907199 2 5 36 1 0.77815125 0.5 0.2 0.333333333 5 0 0 6 2R:24577613-24577640 6 7 929 FBgn0035028 314 17.47 26.84 0.022292994 0.400686892 0.260804769 1 1 1 0.25 dme-miR-304-5p 6mer2-7 GAGATT 2R 24788051 24788056 - 2R_24788051_24788056_- 0.957519261 0.562594526 0.760056894 0.279254004 Reg-5 FBtr0072427|FBtr0305671 24788006|24788006 24788287|24788287 2R - 24788007 24788096 3'utr Reg-5 FlyBase G26491.1 AATTTTATTTATTCGCGTGCATTAGTCGTAAGATCACATAGAGATTCTTGAGTAATAAACCGCATGATGATTATCATTGTTACGAACGTA 57 24788075 0.874270557 13 56 401 0.970588235 1.819543936 0.235294118 0.175438596 0.308823529 57 2 0 66 2R:24788007-24788096 6 Reg-5 FBtr0305671|FBtr0072427 24788006|24788006 24788287|24788287 GAGATT 6mer2-7 dme-miR-304-5p 2R - 24788011 24788090 3'utr Reg-5 FlyBase G20034.1 ATTTATTCGCGTGCATTAGTCGTAAGATCACATAGAGATTCTTGAGTAATAAACCGCATGATGATTATCATTGTTACGAA 42 24788058 0.873442876 9 41 300 0.984126984 1.792391689 0.111111111 0.30952381 0.53968254 42 1 0 62 2R:24788011-24788090 6 24.5 930 FBgn0015801 337.6666667 24.48 36.89333333 0.072556762 1.000816993 0.664076617 19 2 10.5 0.25 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 24788132 24788138 - 2R_24788132_24788138_- 0.780745093 0.782442111 0.781593602 0.00119996 Reg-5 FBtr0072427|FBtr0305671 24788006|24788006 24788287|24788287 2R - 24788111 24788284 3'utr Reg-5 FlyBase G26492.1 CGCGGTCAGAGGATCCGCAGGCCTAGACCTAAGTCCTTGTGTGAATGTGATAGAGCAGATGAGGAGATCCTGCATCATAGAGTGCGAGAGTGAACGTGTGAGTCTTCTAGTTGTAGCCGTTTGAGGAGTTTTCTTGAATGCACTTGAGCTTTAATGGAATTTCGTATCGTATTC 597 24788140 0.82031255 30 572 4538 0.957983193 2.136086097 0.256302521 0.162479062 0.299719888 597 26 4 684 2R:24788111-24788284 7 Reg-5 FBtr0305671|FBtr0072427 24788006|24788006 24788287|24788287 AGCTTTA 7mer-A1 dme-miR-79-3p 2R - 24788113 24788271 3'utr Reg-5 FlyBase G20035.1 TCCGCAGGCCTAGACCTAAGTCCTTGTGTGAATGTGATAGAGCAGATGAGGAGATCCTGCATCATAGAGTGCGAGAGTGAACGTGTGAGTCTTCTAGTTGTAGCCGTTTGAGGAGTTTTCTTGAATGCACTTGAGCTTTAATGGAATTTCGTATCGTAT 366 24788140 0.849085515 30 360 2638 0.983576642 2.731588765 0.28649635 0.366120219 0.576642336 366 9 0 539 2R:24788113-24788271 7 353 931 FBgn0015801 337.6666667 24.48 36.89333333 1.045409674 14.41993464 9.568124322 2 2 2 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2R 24886342 24886349 + 2R_24886342_24886349_+ 0.61942855 0.621550584 0.620489567 0.001500551 NKAIN FBtr0301847|FBtr0301847|FBtr0301847|FBtr0305056|FBtr0305056|FBtr0305056|FBtr0301849|FBtr0301849|FBtr0301849|FBtr0301848|FBtr0301848|FBtr0301848 24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969 24886945|24886945|24886945|24888615|24888615|24888615|24886945|24886945|24886945|24886945|24886945|24886945 2R + 24886246 24886382 5'utr NKAIN FlyBase G19151.1 ATTCAGATACGTGCGATCAGTAGAGACTTTCCTCGAATTGTGATAGAAGGCGTGGAAAGTCGTGACAGAATGCAAGCCTAACAATTTTATGTTGATCTGTGATAACTGAAAACAAATATGAACGACAAACGATAATT 474 24886341 0.985875411 25 442 3704 0.93554007 1.729974286 0.418118467 0.175105485 0.318815331 474 28 9 537 2R:24886246-24886382 8 NKAIN FBtr0301848|FBtr0301848|FBtr0301848|FBtr0301849|FBtr0301849|FBtr0301849|FBtr0305056|FBtr0305056|FBtr0305056|FBtr0301847|FBtr0301847|FBtr0301847 24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969|24885969 24886945|24886945|24886945|24886945|24886945|24886945|24888615|24888615|24888615|24886945|24886945|24886945 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 24886254 24886407 5'utr NKAIN FlyBase G14567.1 ACGTGCGATCAGTAGAGACTTTCCTCGAATTGTGATAGAAGGCGTGGAAAGTCGTGACAGAATGCAAGCCTAACAATTTTATGTTGATCTGTGATAACTGAAAACAAATATGAACGACAAACGATAATTTGAAAAACGAAAATGTCACAAAATC 317 24886341 0.985235473 28 290 2370 0.910714286 1.569267478 0.390625 0.32278481 0.522321429 316 30 10 408 2R:24886254-24886407 8 277.5 932 FBgn0085442 1933.686667 63.05666667 96.30333333 0.143508255 4.40080351 2.881520197 1 1 1 0.25 dme-miR-263a-5p 6mer3-8 GTGCCA 2R 24886886 24886891 + 2R_24886886_24886891_+ 0.923182409 0.954602834 0.938892622 0.022217578 NKAIN FBtr0301847|FBtr0305056|FBtr0301849|FBtr0301848 24885969|24885969|24885969|24885969 24886945|24888615|24886945|24886945 2R + 24886857 24886919 5'utr NKAIN FlyBase G19157.1 ATTTAGCCATGCGAATTGTGCGTAGACTGGTGCCAATTCTCGAAGAGATTGAACGCGTTTCCA 111 24886879 0.718578461 11 105 670 0.939849624 1.795880017 0.15037594 0.144144144 0.285714286 111 7 1 125 2R:24886857-24886919 6 NKAIN FBtr0301848|FBtr0301849|FBtr0305056|FBtr0301847 24885969|24885969|24885969|24885969 24886945|24886945|24888615|24886945 GTGCCA 6mer3-8 dme-miR-263a-5p 2R + 24886744 24886912 5'utr NKAIN FlyBase G14570.1 CGTATAGAAATGTTAAGCCTAGTATTAAGCTTGAGGCCACAAAACGCAAGAGCAGAGCAGATCTAAATCCATTTAGCGTAGACACTATTTACTGTTTTAGATAGATCCCTCATATTTAGCCATGCGAATTGTGCGTAGACTGGTGCCAATTCTCGAAGAGATTGAACGC 129 24886880 0.979568581 24 119 828 0.927884615 1.984527313 0.158653846 0.395348837 0.625 129 14 1 193 2R:24886744-24886912 6 100 933 FBgn0085442 1933.686667 63.05666667 96.30333333 0.051714687 1.585875139 1.038385656 7 6 6.5 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2R 24888583 24888589 + 2R_24888583_24888589_+ 0.654255835 0.671518623 0.662887229 0.012206643 NKAIN FBtr0305056|FBtr0301851|FBtr0343497 24885969|24888369|24887234 24888615|24888615|24888615 2R + 24888573 24888610 3'utr NKAIN FlyBase G19161.1 CTGTCGTTTTACCAAAGTGCCTTTGTAAATAAATACTT 9 24888595 0.652906795 5 8 65 0.916666667 0.740362689 0.083333333 0.333333333 0.5 9 0 1 11 2R:24888573-24888610 7 NKAIN FBtr0343497|FBtr0301851|FBtr0305056 24887234|24888369|24885969 24888615|24888615|24888615 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 24888565 24888599 3'utr NKAIN FlyBase G14573.1 GTAAGTTTCTGTCGTTTTACCAAAGTGCCTTTGTA 21 24888594 0.744534432 7 20 176 0.9375 1.477121255 0.15625 0.476190476 0.65625 21 2 0 30 2R:24888565-24888599 7 15 934 FBgn0085442 1933.686667 63.05666667 96.30333333 0.007757203 0.237881271 0.155757848 -12 -11 -11.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-m8 CTGTGAT 2R 24909999 24910005 + 2R_24909999_24910005_+ 0.591252533 0.660828641 0.626040587 0.049197732 NaCP60E FBtr0333816|FBtr0333816|FBtr0333816|FBtr0333815|FBtr0333815|FBtr0333815 24905200|24905200|24905200|24907305|24907305|24907305 24920265|24920265|24920265|24920265|24920265|24920265 2R + 24909971 24910022 3'utr NaCP60E FlyBase G19162.1 TTAGCATCTCAAATGAGATACGCAAAATCTGTGATCAAATCCACGCCCCCTT 12 24909998 0.977141563 3 9 65 0.769230769 0.698970004 0 0.083333333 0.153846154 12 2 1 10 2R:24909971-24910022 7 NaCP60E FBtr0333816|FBtr0333816|FBtr0333816|FBtr0333815|FBtr0333815|FBtr0333815 24905200|24905200|24905200|24907305|24907305|24907305 24920265|24920265|24920265|24920265|24920265|24920265 CTGTGAT 7mer-m8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 24909984 24910012 3'utr NaCP60E FlyBase G14574.1 TGAGATACGCAAAATCTGTGATCAAATCC 6 24909998 0.954754139 2 5 23 0.833333333 0.698970004 0.166666667 0 0 6 1 0 5 2R:24909984-24910012 7 8.5 935 FBgn0085434 365.8266667 3.443333333 5.213333333 0.023235048 2.468538238 1.630434783 1 1 1 0.25 dme-miR-283-5p 6mer3-8 TGATAT 2R 2494782 2494787 - 2R_2494782_2494787_- 0.964121205 0.928687895 0.94640455 0.025055127 MFS17 FBtr0301780|FBtr0301779|FBtr0301781|FBtr0334936|FBtr0334935 2494740|2494740|2494740|2494740|2494740 2521422|2494825|2494825|2515854|2494965 2R - 2494753 2494807 3'utr MFS17 FlyBase G19280.1 TAAAACTGTTATACCAAATTTGATATATGTTATATGTTCGCTGTTATGATAATAA 18 2494788 0.711138201 7 17 147 0.964285714 1.130333768 0.178571429 0.388888889 0.607142857 18 0 1 27 2R:2494753-2494807 6 MFS17 FBtr0334935|FBtr0334936|FBtr0301781|FBtr0301779|FBtr0301780 2494740|2494740|2494740|2494740|2494740 2494965|2515854|2494825|2494825|2521422 TGATAT 6mer3-8 dme-miR-283-5p 2R - 2494781 2494811 3'utr MFS17 FlyBase G14656.1 AAATTAAAACTGTTATACCAAATTTGATATA 10 2494788 0.67136309 4 10 77 1 1.230448921 0 0.4 0.647058824 10 0 0 17 2R:2494781-2494811 6 12 936 FBgn0058263 777.1033333 67.95666667 103.9733333 0.015441962 0.176583117 0.115414209 1 1 1 0.25 dme-miR-13b-2-5p 7mer-m1 TTGACGC 2R 24991134 24991140 - 2R_24991134_24991140_- 0.825688845 0.722505246 0.774097046 0.072961823 zip FBtr0302575 24990946 24991607 2R - 24991025 24991163 stop_codon zip FlyBase G26564.1 TTAGATGGAGAGGATTCTGCCAATTGACGCGTTAATTATTAGATGAAGAAAAAGTTGAATCGCAGGAAGAAGGTGATGATGAAGAGCAAAATAAACGATTATATTTAATGTTTCTTTTATATAATTTCTCTGTTATTTT 31 24991140 0.972058515 12 31 191 1 1.591064607 0.230769231 0.193548387 0.358974359 31 0 0 39 2R:24991025-24991163 7 zip FBtr0302575 24990946 24991607 TTGACGC 7mer-m1 dme-miR-13b-2-5p 2R - 24991057 24991170 stop_codon zip FlyBase G20095.1 TGAATCATTAGATGGAGAGGATTCTGCCAATTGACGCGTTAATTATTAGATGAAGAAAAAGTTGAATCGCAGGAAGAAGGTGATGATGAAGAGCAAAATAAACGATTATATTTA 27 24991140 0.909120612 11 26 136 0.972222222 1.544068044 0.444444444 0.259259259 0.444444444 27 1 0 35 2R:24991057-24991170 7 15 937 FBgn0265434 6756.406667 120.88 185.8533333 0.002220115 0.124090007 0.080708803 0 0 0 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 25073939 25073946 - 2R_25073939_25073946_- 0.442300543 0.494366779 0.468333661 0.036816434 gol FBtr0300178 25073667 25074917 2R - 25073929 25073988 3'utr gol FlyBase G26606.1 CATTTTTATGTACTTACATTATTATTGCTTAATTCGTTTGATTGCATTTATTTTTCAATT 165 25073947 0.815672286 8 163 2036 0.987068966 2.359835482 0.409482759 0.303030303 0.504310345 165 3 0 229 2R:25073929-25073988 8 gol FBtr0300178 25073667 25074917 TGCATTTA 8mer-A1 dme-miR-277-3p 2R - 25073890 25073987 3'utr gol FlyBase G20123.1 ATTTTTATGTACTTACATTATTATTGCTTAATTCGTTTGATTGCATTTATTTTTCAATTGTTTTTATAGCTCATACATAAATTATTTATATTCCATTT 103 25073947 0.992849771 9 102 1278 0.985915493 2.146128036 0.35915493 0.281553398 0.478873239 103 2 0 140 2R:25073890-25073987 8 126 938 FBgn0004919 407.4766667 15.40666667 23.45 0.30922016 8.178277802 5.373134328 1 1 1 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2R 25074104 25074110 - 2R_25074104_25074110_- 0.64086295 0.548527712 0.594695331 0.065290917 gol FBtr0300178|FBtr0306330 25073667|25072625 25074917|25074917 2R - 25074086 25074153 3'utr gol FlyBase G26607.2 AATGGTAAATGCAATAAATATAGCAAGATCACCGACTGTGTTGCTAGTCACCCATAGACGGCTACACA 30 25074113 0.816100577 11 27 161 0.885714286 1.014240439 0 0.166666667 0.285714286 30 2 2 31 2R:25074086-25074153 7 gol FBtr0300178|FBtr0306330 25073667|25072625 25074917|25074917 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R - 25074012 25074169 3'utr gol FlyBase G20124.1 AAGCTGTAGAAAAGGTAATGGTAAATGCAATAAATATAGCAAGATCACCGACTGTGTTGCTAGTCACCCATAGACGGCTACACAAATCGCAGCCAGCGCATATTGTGAATCAATGACTGCTGTAATATCACAGGTGCCAAAGTATTTGCTTTTAGTTT 63 25074114 0.814913105 23 62 377 0.978947368 1.968482949 0.189473684 0.428571429 0.621052632 63 2 0 93 2R:25074012-25074169 7 20 939 FBgn0004919 407.4766667 15.40666667 23.45 0.049082565 1.298139334 0.852878465 3 4 3.5 0.25 dme-miR-34-5p 6mer2-7 ACTGCC 2R 3900374 3900379 - 2R_3900374_3900379_- 0.994128153 0.967406243 0.980767198 0.018895307 uex FBtr0302226 3900283 3900785 2R - 3900355 3900412 3'utr uex FlyBase G19352.1 TTAGAAGGGCTAAACTCGATGTTAAAAAAATAAACTGCCTGTTTAACTGTATTCCTTA 21 3900371 0.928757019 9 17 173 0.869565217 1 0.043478261 0.095238095 0.173913043 21 2 1 20 2R:3900355-3900412 6 uex FBtr0302226 3900283 3900785 ACTGCC 6mer2-7 dme-miR-34-5p 2R - 3900327 3900436 3'utr uex FlyBase G14709.1 AGTTAATCTTCCTTAGAAATGGTTTTAGAAGGGCTAAACTCGATGTTAAAAAAATAAACTGCCTGTTTAACTGTATTCCTTATTAAACTTAAATGTGTTTGTGAACACAG 20 3900372 0.850428671 11 17 157 1 1.505149978 0.09375 0.5 0.6875 20 0 0 32 2R:3900327-3900436 6 11.5 940 FBgn0262124 3391.336667 116.7833333 178.7433333 0.003390993 0.098472956 0.064338064 -8 -7 -7.5 0.25 dme-miR-79-3p 7mer-m8 TAGCTTT 2R 3900593 3900599 - 2R_3900593_3900599_- 0.588233589 0.617534392 0.602883991 0.020718794 uex FBtr0302226 3900283 3900785 2R - 3900577 3900671 3'utr uex FlyBase G19353.1 ACAATTTTTATACTATACCATAGGTTTTCCCATATTAATTATATTCCTAAACATCTTAAACATAAAAAAAAATAGCTTTTCCAAAACTGTGTATG 17 3900599 0.983686956 7 13 101 0.833333333 0.875061263 0 0.058823529 0.111111111 17 2 1 15 2R:3900577-3900671 7 uex FBtr0302226 3900283 3900785 TAGCTTT 7mer-m8 dme-miR-79-3p 2R - 3900565 3900608 3'utr uex FlyBase G14711.1 AAAAAAAAATAGCTTTTCCAAAACTGTGTATGAATTTATATATA 7 3900594 0.981558222 3 6 46 0.888888889 0.903089987 0 0.285714286 0.444444444 7 1 0 8 2R:3900565-3900608 7 9 941 FBgn0262124 3391.336667 116.7833333 178.7433333 0.002653821 0.077065791 0.050351528 0 -5 -2.5 0.25 dme-miR-305-5p 6mer3-8 AGTACA 2R 4564541 4564546 + 2R_4564541_4564546_+ 0.994863463 0.999852223 0.997357843 0.003527544 Stlk FBtr0111111|FBtr0308810 4564500|4564500 4565281|4564987 2R + 4564514 4564553 3'utr Stlk FlyBase G12823.1 TGTTTTTCTGATCACTTCGGTGCCTTTAGTACAGAATCTA 19 4564539 0.599846623 7 19 150 1 1.431363764 0.407407407 0.315789474 0.518518519 19 0 0 27 2R:4564514-4564553 6 Stlk FBtr0111111|FBtr0308810 4564500|4564500 4565281|4564987 AGTACA 6mer3-8 dme-miR-305-5p 2R + 4564519 4564555 3'utr Stlk FlyBase G9785.1 TTCTGATCACTTCGGTGCCTTTAGTACAGAATCTACA 13 4564540 0.626645518 5 12 104 0.954545455 1.322219295 0 0.461538462 0.681818182 13 1 0 21 2R:4564519-4564555 6 14.5 942 FBgn0046692 309.34 20.17666667 30.87 0.04687399 0.718651908 0.469711694 2 1 1.5 0.25 dme-bantam-3p 6mer3-8 TGATCT 2R 4817380 4817385 - 2R_4817380_4817385_- 0.999553021 0.996689245 0.998121133 0.002025012 CG17528 FBtr0111277 4815424 4817448 2R - 4817356 4817429 3'utr CG17528 FlyBase G19500.1 AAAAAAAGCAACTTTCACTCTTAAACGACGAACTTTTGTATTTCTGATCTAAAAATGCTTTTATATTAGCCCTA 38 4817386 0.863462485 11 37 295 1 1.591064607 0.128205128 0.054054054 0.102564103 37 0 0 39 2R:4817356-4817429 6 CG17528 FBtr0111277|FBtr0111274 4815424|4817259 4817448|4817448 TGATCT 6mer3-8 dme-bantam-3p 2R - 4817349 4817428 3'utr CG17528 FlyBase G14816.1 AAAAAAGCAACTTTCACTCTTAAACGACGAACTTTTGTATTTCTGATCTAAAAATGCTTTTATATTAGCCCTAATTTATT 26 4817386 0.984012037 10 24 207 0.976190476 1.311753861 0.119047619 0.423076923 0.642857143 26 0 1 41 2R:4817349-4817428 6 18 943 FBgn0261387 730.0966667 30.65666667 47.04333333 0.02465427 0.587147983 0.382625948 1 1 1 0.25 dme-miR-92b-3p 7mer-A1 TGCAATA 2R 5117426 5117432 - 2R_5117426_5117432_- 0.773683208 0.77458018 0.774131694 0.000634275 gus FBtr0309850|FBtr0309846|FBtr0309848|FBtr0309851 5117211|5117211|5116988|5117211 5117662|5117662|5117662|5117662 2R - 5117356 5117628 NoAnnotation G19516.1 TTTTTGCTGCATGTGATGAAAGCAGCAAATACTAATTGTGTTAGATTATAATAGTATTAGATCAATGTTTGTCTGTCCTCCAACAGGAAAATCATAGGTATACAATTCGTAATAATACTTTACTTAAGCTATAAAGATTGATTGTATATTAAGAAGCATTCAAATAATAGTATGTACACGGAATGACATCTCATCTTGCAATAAATTGGAGAATCGAGTTTCTTCATGTAACATTATTTAAAAACTATACTCACTTCGTGTTATATAAAAAGC 279 5117445 0.969244809 47 268 2013 0.964285714 1.846337112 0.090659341 0.222222222 0.403846154 279 9 4 351 2R:5117356-5117628 7 gus FBtr0309846|FBtr0309852|FBtr0309849|FBtr0309850|FBtr0309847|FBtr0309848|FBtr0309851 5117211|5117330|5117330|5117211|5117392|5116988|5117211 5117662|5117662|5117662|5117662|5117662|5117662|5117662 TGCAATA 7mer-A1 dme-miR-92b-3p 2R - 5117401 5117629 3'utr gus FlyBase G14831.1 ATTTTTGCTGCATGTGATGAAAGCAGCAAATACTAATTGTGTTAGATTATAATAGTATTAGATCAATGTTTGTCTGTCCTCCAACAGGAAAATCATAGGTATACAATTCGTAATAATACTTTACTTAAGCTATAAAGATTGATTGTATATTAAGAAGCATTCAAATAATAGTATGTACACGGAATGACATCTCATCTTGCAATAAATTGGAGAATCGAGTTTCTTCATG 177 5117445 0.982343248 37 170 1275 0.960784314 2.389166084 0.094117647 0.299435028 0.51372549 177 10 0 245 2R:5117401-5117629 7 91 944 FBgn0026238 600.2866667 48.80333333 74.76 0.151594238 1.864626733 1.217228464 13 13 13 0.25 dme-miR-1003-3p 8mer-A1 ATGTGAGA 2R 5154671 5154678 + 2R_5154671_5154678_+ 0.638409011 0.643535515 0.640972263 0.003624983 Atf6 FBtr0086080|FBtr0086079 5154029|5154029 5154756|5154756 2R + 5154646 5154696 3'utr Atf6 FlyBase G12959.1 TAAGTTTTATTAATTAAAACAGCCTATGTGAGAGATGTAGTTTTGTAAAAT 11 5154671 0.976339266 4 11 78 1 1.113943352 0.230769231 0.181818182 0.307692308 11 0 0 13 2R:5154646-5154696 8 Atf6 FBtr0086079|FBtr0086080 5154029|5154029 5154756|5154756 ATGTGAGA 8mer-A1 dme-miR-1003-3p 2R + 5154656 5154696 3'utr Atf6 FlyBase G9888.1 TAATTAAAACAGCCTATGTGAGAGATGTAGTTTTGTAAAAT 8 5154673 0.986396505 4 7 54 0.916666667 1.041392685 0.25 0.375 0.583333333 8 1 0 11 2R:5154656-5154696 8 9.5 945 FBgn0033010 930.9533333 36.95333333 56.66 0.010204593 0.257081003 0.167666784 0 -2 -1 0.25 dme-miR-999-3p 6mer3-8 AGTTAA 2R 5295929 5295934 + 2R_5295929_5295934_+ 0.992395587 0.999446065 0.995920826 0.004985456 d4 FBtr0086082|FBtr0335258|FBtr0086083|FBtr0111115 5295893|5295893|5295893|5295893 5295965|5295965|5295965|5295965 2R + 5295925 5295954 3'utr d4 FlyBase G12979.1 TATAAGTTAATCTTCTCATAAATATAAAAA 14 5295932 0.829688727 6 11 112 0.785714286 0.740362689 0 0 0 14 2 1 11 2R:5295925-5295954 6 d4 FBtr0086083|FBtr0111115|FBtr0086082|FBtr0335258 5295893|5295893|5295893|5295893 5295965|5295965|5295965|5295965 AGTTAA 6mer3-8 dme-miR-999-3p 2R + 5295917 5295956 3'utr d4 FlyBase G9903.1 TCACCAATTATAAGTTAATCTTCTCATAAATATAAAAAAC 14 5295932 0.706228405 5 13 122 0.882352941 1.176091259 0.058823529 0.214285714 0.352941176 14 2 0 15 2R:5295917-5295956 6 14 946 FBgn0033015 779.7666667 52.91333333 81.00666667 0.017954089 0.264583596 0.172825282 -3 -3 -3 0.25 dme-miR-34-5p 8mer-A1 CACTGCCA 2R 5447156 5447163 + 2R_5447156_5447163_+ 0.67712537 0.678368307 0.677746839 0.000878863 laccase2 FBtr0299918|FBtr0301063 5446975|5446975 5447974|5447298 2R + 5447113 5447171 3'utr laccase2 FlyBase G13033.1 ATTTAAAACGCACAATGCACTGTTTTTATTTAATAATTTTAAACACTGCCAATGTCCAA 17 5447150 0.981495538 9 16 121 1 1.230448921 0.058823529 0 0 17 0 0 17 2R:5447113-5447171 8 laccase2 FBtr0301063|FBtr0299918 5446975|5446975 5447298|5447974 CACTGCCA 8mer-A1 dme-miR-34-5p 2R + 5447114 5447168 3'utr laccase2 FlyBase G9945.1 TTTAAAACGCACAATGCACTGTTTTTATTTAATAATTTTAAACACTGCCAATGTC 8 5447142 0.983091335 8 8 63 1 1.176091259 0.2 0.5 0.733333333 8 0 0 15 2R:5447114-5447168 8 9 947 FBgn0259247 554.2366667 21.22 32.31 0.01623855 0.424128181 0.278551532 6 14 10 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 2R 5609707 5609714 + 2R_5609707_5609714_+ 0.565353937 0.629789708 0.597571822 0.045562991 CG17508 FBtr0307172 5609514 5609994 2R + 5609632 5609738 3'utr CG17508 FlyBase G13043.1 CTGCATATATCAGGAACTCATTCTAAGGATTGGCTTTCAGTTCCCAGGAACCCTATTATATAGAAATTAGAATTGACCAAAGAATTTATTAAATTGCAAGAAAACCG 49 5609704 0.915205379 17 46 354 0.925925926 1.698970004 0.074074074 0.102040816 0.185185185 49 4 0 50 2R:5609632-5609738 8 CG17508 FBtr0307172 5609514 5609994 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 5609638 5609724 3'utr CG17508 FlyBase G9956.1 ATATCAGGAACTCATTCTAAGGATTGGCTTTCAGTTCCCAGGAACCCTATTATATAGAAATTAGAATTGACCAAAGAATTTATTAAA 30 5609704 0.877027844 14 30 207 1 1.653212514 0.111111111 0.333333333 0.555555556 30 0 0 45 2R:5609638-5609724 8 18 948 FBgn0039970 517.7666667 53.29333333 81.50333333 0.034764695 0.337753315 0.220849863 3 3 3 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 2R 5609762 5609767 + 2R_5609762_5609767_+ 0.514441792 0.578477495 0.546459643 0.045280078 CG17508 FBtr0307172 5609514 5609994 2R + 5609751 5609793 3'utr CG17508 FlyBase G13044.1 AAATAGACAATTGTGTTTGGAGTGGGCATGCCCAACGTATTTT 10 5609761 0.761410487 7 10 61 1 1.041392685 0.181818182 0.1 0.181818182 10 0 0 11 2R:5609751-5609793 6 CG17508 FBtr0307172 5609514 5609994 TGTGTT 6mer3-8 dme-miR-317-3p 2R + 5609734 5609777 3'utr CG17508 FlyBase G9957.1 AACCGAAACAAAGTGTGAAATAGACAATTGTGTTTGGAGTGGGC 5 5609754 0.962587751 3 5 27 1 0.903089987 0 0.2 0.5 5 0 0 8 2R:5609734-5609777 6 5.5 949 FBgn0039970 517.7666667 53.29333333 81.50333333 0.010622546 0.103202402 0.067481903 1 8 4.5 0.25 dme-miR-14-3p 6mer2-7 AGACTG 2R 5656095 5656100 + 2R_5656095_5656100_+ 0.978454268 0.990505369 0.984479819 0.008521415 CG1344 FBtr0331967 5655809 5656778 2R + 5656046 5656228 3'utr CG1344 FlyBase G13063.1 TTCTCGTTCGCACTCCCACCAGCTGATTGTAATGGGTAGTCGGAGAACTAGACTGTAAAGTTTTCTCTTGTTTGTTCCTTTTTTTGTCCTAACAAATAAATGCTTGCTTACTTTTGTATTATAAAAAATCGACACCTCGGTATTTTTGTTTTTGATTAAGACTTAGTAATAGAATTGTAATCG 107 5656094 0.890763443 19 99 787 0.929133858 1.594760753 0.220472441 0.177570093 0.307086614 107 7 2 118 2R:5656046-5656228 6 CG1344 FBtr0331967 5655809 5656778 AGACTG 6mer2-7 dme-miR-14-3p 2R + 5656075 5656117 3'utr CG1344 FlyBase G9977.1 TAATGGGTAGTCGGAGAACTAGACTGTAAAGTTTTCTCTTGTT 22 5656101 0.766819584 4 21 134 1 1.477121255 0.1 0.227272727 0.433333333 22 0 0 30 2R:5656075-5656117 6 41 950 FBgn0027507 843.1966667 42.83333333 65.52 0.048624481 0.957198444 0.625763126 1 -6 -2.5 0.25 dme-miR-308-3p 8mer-m1 CTGTGATT 2R 5656725 5656732 + 2R_5656725_5656732_+ 0.384196514 0.384355763 0.384276138 0.000112642 CG1344 FBtr0331967 5655809 5656778 2R + 5656694 5656737 3'utr CG1344 FlyBase G13066.1 CAGGTTATATGAGATTGTTTTTGAAAGCCCTCTGTGATTTCTTA 13 5656732 0.803696331 3 13 109 1 1.255272505 0.111111111 0.307692308 0.5 13 0 0 18 2R:5656694-5656737 8 CG1344 FBtr0331967 5655809 5656778 CTGTGATT 8mer-m1 dme-miR-308-3p 2R + 5656715 5656736 3'utr CG1344 FlyBase G9980.1 TGAAAGCCCTCTGTGATTTCTT 6 5656732 0.611158745 2 6 43 1 0.903089987 0 0.166666667 0.375 6 0 0 8 2R:5656715-5656736 8 7.5 951 FBgn0027507 843.1966667 42.83333333 65.52 0.008894722 0.175097276 0.114468864 -7 -7 -7 0.25 dme-miR-283-5p 7mer-A1 GATATTA 2R 5677561 5677567 - 2R_5677561_5677567_- 0.782771854 0.782902317 0.782837086 9.22E-05 scaf FBtr0086061|FBtr0086060 5676748|5676748 5677716|5677716 2R - 5677559 5677606 3'utr scaf FlyBase G19676.1 ATTGCAATTTCGTTGGAGCTCAAAATGGAGGGCATTCCCGATATTATC 10 5677572 0.730026474 6 10 64 1 1.113943352 0 0.2 0.384615385 10 0 0 13 2R:5677559-5677606 7 scaf FBtr0086061|FBtr0086060 5676748|5676748 5677716|5677716 GATATTA 7mer-A1 dme-miR-283-5p 2R - 5677559 5677590 3'utr scaf FlyBase G14949.1 AGCTCAAAATGGAGGGCATTCCCGATATTATC 5 5677581 0.856020247 4 5 27 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2R:5677559-5677590 7 4.5 952 FBgn0033033 687.87 27.26 41.96666667 0.006541934 0.165077036 0.107227959 5 14 9.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 2R 5705043 5705048 + 2R_5705043_5705048_+ 0.961280241 0.976745236 0.969012739 0.010935406 vlc FBtr0307530|FBtr0300503|FBtr0086039|FBtr0086040|FBtr0307531|FBtr0086041|FBtr0307532|FBtr0300502 5704918|5704918|5704918|5704918|5704918|5704918|5704918|5704918 5705439|5705439|5705439|5705439|5705439|5705439|5705439|5705439 2R + 5705019 5705063 3'utr vlc FlyBase G13103.1 ATTTCTAGTTGAATTAATCATTTACTAGTCCCAACTAAAATTATT 18 5705040 0.702970362 6 18 137 1 1.414973348 0 0.277777778 0.5 18 0 0 26 2R:5705019-5705063 6 vlc FBtr0307532|FBtr0300502|FBtr0307531|FBtr0086041|FBtr0086039|FBtr0086040|FBtr0307530|FBtr0300503 5704918|5704918|5704918|5704918|5704918|5704918|5704918|5704918 5705439|5705439|5705439|5705439|5705439|5705439|5705439|5705439 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 2R + 5705033 5705057 3'utr vlc FlyBase G10015.1 TAATCATTTACTAGTCCCAACTAAA 10 5705040 0.639672593 4 9 53 1 1.113943352 0.076923077 0.3 0.461538462 10 0 0 13 2R:5705033-5705057 6 14 953 FBgn0259978 569 27.35666667 41.84333333 0.024604569 0.511758255 0.334581375 3 3 3 0.25 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 5705205 5705210 + 2R_5705205_5705210_+ 0.978125865 0.979395642 0.978760754 0.000897813 vlc FBtr0307530|FBtr0300503|FBtr0086039|FBtr0086040|FBtr0307531|FBtr0086041|FBtr0307532|FBtr0300502 5704918|5704918|5704918|5704918|5704918|5704918|5704918|5704918 5705439|5705439|5705439|5705439|5705439|5705439|5705439|5705439 2R + 5705071 5705236 3'utr vlc FlyBase G13104.1 AGCTCCTCACTGAAATCTGTCACAAGGCGTCAAATATCTAGGAGATAACGAAGTATTGTCACCAATTGCGACTTACCTAAAGTTGTTCATAAATATTGCCTTATCCGCGAAAGATTTCGCTAATTAATCAATTTGCTGTGCACATTATGTAATTGAAAATTAAAAT 144 5705203 0.806513121 24 142 1075 0.983783784 1.782950133 0.108108108 0.215277778 0.389189189 144 1 2 182 2R:5705071-5705236 6 vlc FBtr0307532|FBtr0300502|FBtr0307531|FBtr0086041|FBtr0086039|FBtr0086040|FBtr0307530|FBtr0300503 5704918|5704918|5704918|5704918|5704918|5704918|5704918|5704918 5705439|5705439|5705439|5705439|5705439|5705439|5705439|5705439 GCTGTG 6mer2-7 dme-miR-1008-3p 2R + 5705157 5705254 3'utr vlc FlyBase G10017.1 TCATAAATATTGCCTTATCCGCGAAAGATTTCGCTAATTAATCAATTTGCTGTGCACATTATGTAATTGAAAATTAAAATTACTTGATTACATATAAA 62 5705203 0.987724126 10 56 500 0.896226415 1.500602351 0.066037736 0.435483871 0.669811321 62 9 2 95 2R:5705157-5705254 6 79 954 FBgn0259978 569 27.35666667 41.84333333 0.13884007 2.887778725 1.887994902 2 2 2 0.25 dme-miR-252-5p 7mer-m8 GTACTTA 2R 5706257 5706263 - 2R_5706257_5706263_- 0.573057531 0.573762418 0.573409974 0.00049844 ap FBtr0086058|FBtr0086059 5706200|5706200 5707932|5707932 2R - 5706196 5706456 3'utr ap FlyBase G19684.1 TATGTAACTAATATTTATTGCCCAAATTTAATAGTTAGAGACGAATTTAGTTTAGAACAGACTATACAATAAAGTCCATATGTACATGTAGTATTACGGTAAAGTAATAGCTTCGCTCAAGCATACGACCAGGTTCGTAAGCTATTAATACGAAACTGTAATTATAATCAAATCAGTAAACACTGGAAGATTTGTACTTACAAATAGTTAACTCATAAGTCTTACCATAGAAGCTTAAATAAAACGTATTCAAGCAAAAAA 822 5706264 0.770457601 64 783 6073 0.951612903 2.196820744 0.069556452 0.177615572 0.318548387 822 43 5 944 2R:5706196-5706456 7 ap FBtr0086058|FBtr0086059 5706200|5706200 5707932|5707932 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 5706195 5706449 3'utr ap FlyBase G14954.1 CTAATATTTATTGCCCAAATTTAATAGTTAGAGACGAATTTAGTTTAGAACAGACTATACAATAAAGTCCATATGTACATGTAGTATTACGGTAAAGTAATAGCTTCGCTCAAGCATACGACCAGGTTCGTAAGCTATTAATACGAAACTGTAATTATAATCAAATCAGTAAACACTGGAAGATTTGTACTTACAAATAGTTAACTCATAAGTCTTACCATAGAAGCTTAAATAAAACGTATTCAAGCAAAAAAA 615 5706264 0.831704405 58 582 4319 0.950854701 2.04630002 0.071581197 0.356097561 0.576923077 615 39 7 890 2R:5706195-5706449 7 323 955 FBgn0000099 2 0.113333333 0.183333333 161.5 2850 1761.818182 1 1 1 0.25 dme-miR-2b-2-5p 7mer-A1 TGAAGAA 2R 5706506 5706512 - 2R_5706506_5706512_- 0.823326347 0.823122919 0.823224633 0.000143826 ap FBtr0086058|FBtr0086059 5706200|5706200 5707932|5707932 2R - 5706490 5706825 3'utr ap FlyBase G19685.2 AGTCTAGTTTACACGTATGTTCTACGAGGAACGGACCGATTGTTCCTATGAGAGCTATAGGTTTTACCATATGTATATGCATGCATTACTTCAGCTCCATCTCTTTTTGATTCATAAACGTATAATGGTTTGAGAGTAAACATTTTGTGGCGTATATAGTTCAAGTTTACATATTTAGAGTACGGTGCCCAAGACGCGCTTTAAAAATATTGAAAACGGGTTGTTAATGAAGTCCCATATGTATAATTGTCTAGGTACATGGATATTGTTAATATATTATTATTTTTATTTAAAGAGCTCTCAACAATATGTATGAAGAAATCTGCGTATATCAAC 1223 5706512 0.882054457 86 1159 8167 0.95379538 1.56880324 0.238283828 0.188216039 0.345214521 1222 32 38 1445 2R:5706490-5706825 7 ap FBtr0086058|FBtr0086059 5706200|5706200 5707932|5707932 TGAAGAA 7mer-A1 dme-miR-2b-2-5p 2R - 5706490 5706820 3'utr ap FlyBase G14955.2 AGTTTACACGTATGTTCTACGAGGAACGGACCGATTGTTCCTATGAGAGCTATAGGTTTTACCATATGTATATGCATGCATTACTTCAGCTCCATCTCTTTTTGATTCATAAACGTATAATGGTTTGAGAGTAAACATTTTGTGGCGTATATAGTTCAAGTTTACATATTTAGAGTACGGTGCCCAAGACGCGCTTTAAAAATATTGAAAACGGGTTGTTAATGAAGTCCCATATGTATAATTGTCTAGGTACATGGATATTGTTAATATATTATTATTTTTATTTAAAGAGCTCTCAACAATATGTATGAAGAAATCTGCGTATATCAAC 816 5706512 0.881105855 68 768 5229 0.941415785 1.586212104 0.260374288 0.378676471 0.587469487 816 43 29 1157 2R:5706490-5706820 7 517.5 956 FBgn0000099 2 0.113333333 0.183333333 258.75 4566.176471 2822.727273 0 0 0 0.25 dme-miR-1012-3p 6mer3-8 TTGACT 2R 5756100 5756105 + 2R_5756100_5756105_+ 0.978488612 0.999632525 0.989060569 0.014950995 l(2)09851 FBtr0335269 5755985 5756327 2R + 5755967 5756111 stop_codon l(2)09851 FlyBase G13126.1 TTCGCACGATCAGTGTCTGACCTCGCTATTATTCTGTTTCTTAACGTTAAAAAAATTAAACCGATCTTGTGTCTTTGGGTTTTAAGAATTTTTTACTGGACTTATTTAAACACAAAAAGAAAGTGGAACACTATTGACTTTTATG 41 5756107 0.792305763 16 39 366 0.958333333 1.662757832 0.166666667 0.170731707 0.291666667 41 2 0 46 2R:5755967-5756111 6 l(2)09851 FBtr0335269 5755985 5756327 TTGACT 6mer3-8 dme-miR-1012-3p 2R + 5756083 5756111 3'utr l(2)09851 FlyBase G10039.1 AAGAAAGTGGAACACTATTGACTTTTATG 10 5756107 0.561431005 2 10 73 1 1.176091259 0.466666667 0.3 0.533333333 10 0 0 15 2R:5756083-5756111 6 10 957 FBgn0022288 410.3333333 32.80666667 50.73333333 0.024370431 0.304816094 0.197109067 -7 -7 -7 0.25 dme-miR-14-3p 7mer-m8 AAGACTG 2R 5772217 5772223 + 2R_5772217_5772223_+ 0.671795682 0.671795753 0.671795718 7.07E-08 Gp210 FBtr0086044|FBtr0335270 5772199|5772199 5772492|5774324 2R + 5772194 5772238 stop_codon Gp210 FlyBase G13157.1 TAGTTAGTTGGATACGTAAATTAAAGACTGTCAGCAAACTGACTC 89 5772224 0.694120598 5 85 438 0.962264151 2.008600172 0.169811321 0.168539326 0.301886792 89 4 0 102 2R:5772194-5772238 7 Gp210 FBtr0335270|FBtr0086044 5772199|5772199 5774324|5772492 AAGACTG 7mer-m8 dme-miR-14-3p 2R + 5772134 5772242 stop_codon Gp210 FlyBase G10060.1 GTATATTTATGGACACCCTCGTTTGAACTCTTCAAACAGATCAGAAAACTCGACTAGCTTTAGTTAGTTGGATACGTAAATTAAAGACTGTCAGCAAACTGACTCGGGT 84 5772215 0.967086338 14 80 436 0.959016393 1.767155866 0.262295082 0.369047619 0.56557377 84 4 1 117 2R:5772134-5772242 7 80.5 958 FBgn0266580 2948.146667 58.77 90.26 0.02730529 1.369746469 0.891867937 -7 2 -2.5 0.25 dme-miR-980-3p 6mer2-7 GCAGCT 2R 5772292 5772297 + 2R_5772292_5772297_+ 0.993734271 0.999127897 0.996431084 0.003813851 Gp210 FBtr0086044|FBtr0335270 5772199|5772199 5772492|5774324 2R + 5772256 5772339 3'utr Gp210 FlyBase G13158.1 ATATAAGATAAACTCAGGCATTTGTAATACTTATATGCAGCTTCTGTCCTTTAAAGTAAATTCTTCTCATCCTGACGCCAGAAA 67 5772297 0.914720795 14 65 580 0.974683544 1.58546073 0.075949367 0.164179104 0.291139241 67 1 1 77 2R:5772256-5772339 6 Gp210 FBtr0335270|FBtr0086044 5772199|5772199 5774324|5772492 GCAGCT 6mer2-7 dme-miR-980-3p 2R + 5772260 5772318 3'utr Gp210 FlyBase G10061.1 AAGATAAACTCAGGCATTTGTAATACTTATATGCAGCTTCTGTCCTTTAAAGTAAATTC 45 5772297 0.896308237 9 43 390 0.971014493 1.826074803 0.130434783 0.355555556 0.579710145 45 2 0 67 2R:5772260-5772318 6 49.5 959 FBgn0266580 2948.146667 58.77 90.26 0.016790209 0.842266462 0.548415688 -5 -5 -5 0.25 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 6011784 6011789 + 2R_6011784_6011789_+ 0.855328183 0.852508885 0.853918534 0.001993546 Src42A FBtr0335275|FBtr0335276 6011610|6011610 6012500|6012795 2R + 6011767 6011874 3'utr Src42A FlyBase G13169.1 CCGTTTGGTGCCCGTTGGCTGTGGTTGTCTAGGTACCGATACGATTCATGTTATTAGCATTTAAGGTAAATAGTTGCTGAGGTGGAATGCAATTTCAAATGACGTTCC 221 6011782 0.831153906 18 217 1827 0.985663082 1.962211439 0.508960573 0.20361991 0.369175627 221 2 2 275 2R:6011767-6011874 6 Src42A FBtr0335275|FBtr0335276 6011610|6011610 6012500|6012795 GCTGTG 6mer2-7 dme-miR-1008-3p 2R + 6011766 6011808 3'utr Src42A FlyBase G10068.1 CCCGTTTGGTGCCCGTTGGCTGTGGTTGTCTAGGTACCGATAC 145 6011782 0.824277264 7 143 1173 0.991416309 2.36361198 0.467811159 0.420689655 0.639484979 145 2 0 231 2R:6011766-6011808 6 176 960 FBgn0264959 2196.93 83.74333333 128.84 0.080111792 2.101659834 1.366035393 2 2 2 0.25 dme-miR-965-3p 7mer-m8 TACGCTT 2R 6011934 6011940 + 2R_6011934_6011940_+ 0.617755886 0.616178302 0.616967094 0.001115532 Src42A FBtr0335275|FBtr0335276 6011610|6011610 6012500|6012795 2R + 6011893 6011961 3'utr Src42A FlyBase G13170.1 TTGTTTATTATGACAAACATATTGGCACTTGGTCGGATTTATACGCTTTGACATCCTTGTCGTATATTT 22 6011933 0.98826728 12 21 194 0.96 1.380211242 0.2 0.090909091 0.2 22 1 0 24 2R:6011893-6011961 7 Src42A FBtr0335275|FBtr0335276 6011610|6011610 6012500|6012795 TACGCTT 7mer-m8 dme-miR-965-3p 2R + 6011902 6011956 3'utr Src42A FlyBase G10070.1 ATGACAAACATATTGGCACTTGGTCGGATTTATACGCTTTGACATCCTTGTCGTA 20 6011941 0.679819241 6 18 170 0.944444444 1.531478917 0.083333333 0.5 0.722222222 20 2 0 34 2R:6011902-6011956 7 15.5 961 FBgn0264959 2196.93 83.74333333 128.84 0.0070553 0.18508936 0.120304253 1 -7 -3 0.25 dme-miR-282-5p 7mer-A1 GAGGCTA 2R 6021100 6021106 - 2R_6021100_6021106_- 0.791037769 0.787450277 0.789244023 0.002536746 Strica FBtr0335289|FBtr0086028 6020309|6020866 6021344|6021344 2R - 6021063 6021130 3'utr Strica FlyBase G19973.1 AAACTAAAGAGGCGGTAAAAGTGTGAGGCTAAATATTAAAAAAAAATTAGTCTGGGGTCGGAATTGTT 19 6021107 0.955825423 4 19 93 1 1.380211242 0.208333333 0.263157895 0.416666667 19 0 0 24 2R:6021063-6021130 7 Strica FBtr0335289|FBtr0086028 6020309|6020866 6021344|6021344 GAGGCTA 7mer-A1 dme-miR-282-5p 2R - 6021066 6021122 3'utr Strica FlyBase G15167.1 GAGGCGGTAAAAGTGTGAGGCTAAATATTAAAAAAAAATTAGTCTGGGGTCGGAATT 22 6021107 0.824764868 3 21 94 1 1.51851394 0.242424242 0.380952381 0.606060606 21 0 0 33 2R:6021066-6021122 7 12.5 962 FBgn0033051 1511.393333 79.10666667 121.57 0.008270514 0.158014495 0.10282142 1 1 1 0.25 dme-miR-965-3p 8mer-A1 TACGCTTA 2R 6026298 6026305 - 2R_6026298_6026305_- 0.612820828 0.622486958 0.617653893 0.006835036 SCAP FBtr0086027 6026271 6026669 2R - 6026282 6026383 3'utr SCAP FlyBase G19985.1 ACATAGTGTCTTAAAGCGCCTCAGCCTAATATAAAATGACTAAATGTTAAAATAAATACATTATTTATTAGAATCACCTACGCTTAATATTCAGAAAGAATA 54 6026305 0.868138262 9 51 371 0.950819672 1.286306739 0.131147541 0.12962963 0.229508197 54 1 2 58 2R:6026282-6026383 8 SCAP FBtr0086027 6026271 6026669 TACGCTTA 8mer-A1 dme-miR-965-3p 2R - 6026283 6026322 3'utr SCAP FlyBase G15175.1 TATTTATTAGAATCACCTACGCTTAATATTCAGAAAGAAT 18 6026305 0.854438311 3 18 131 1 1.414973348 0.153846154 0.444444444 0.615384615 18 0 0 26 2R:6026283-6026322 8 27.5 963 FBgn0033052 1236.103333 29.14666667 44.57333333 0.022247331 0.943504117 0.616960814 0 0 0 0.25 dme-miR-305-3p 7mer-A1 TGTGCCA 2R 6082223 6082229 - 2R_6082223_6082229_- 0.386097528 0.422594852 0.40434619 0.025807559 Ars2 FBtr0310666 6080826 6084356 2R - 6082151 6082245 5'utr Ars2 FlyBase G20016.1 AGTTTCTTACTAAGACTGTGCCACTGAGTGACGAAGAGATTAAGAATCTTGGAGCCAAGGACGCCGAAACGGAGGTGGAAAAGTTTGTGCAAGCG 23 6082227 0.971078171 9 20 127 0.884615385 1.06069784 0.153846154 0.130434783 0.230769231 23 2 1 23 2R:6082151-6082245 7 Ars2 FBtr0310666 6080826 6084356 TGTGCCA 7mer-A1 dme-miR-305-3p 2R - 6082189 6082245 5'utr Ars2 FlyBase G15192.1 AGTTTCTTACTAAGACTGTGCCACTGAGTGACGAAGAGATTAAGAATCTTGGAGCCA 10 6082227 0.9801368 4 9 67 0.9375 1.176091259 0.125 0.5 0.6875 10 1 0 15 2R:6082189-6082245 7 11.5 964 FBgn0033062 1878.093333 71.69666667 110.3966667 0.006123231 0.160397973 0.104169812 -2 -2 -2 0.25 dme-miR-1003-3p 6mer2-7 TGTGAG 2R 6082370 6082375 - 2R_6082370_6082375_- 0.967709831 0.975106533 0.971408182 0.005230257 Ars2 FBtr0310666 6080826 6084356 2R - 6082356 6082403 5'utr Ars2 FlyBase G20017.1 AGTGCACTCAGTAGACTATTACAACCATTGTGAGTATCCATATGAAGA 16 6082376 0.709641842 5 15 104 0.95 0.977723605 0.2 0.1875 0.35 16 0 1 19 2R:6082356-6082403 6 Ars2 FBtr0310666 6080826 6084356 TGTGAG 6mer2-7 dme-miR-1003-3p 2R - 6082352 6082410 5'utr Ars2 FlyBase G15193.1 TGCGTATAGTGCACTCAGTAGACTATTACAACCATTGTGAGTATCCATATGAAGACGAG 15 6082385 0.91753155 7 12 87 0.913043478 1.021189299 0.086956522 0.5 0.695652174 14 1 1 21 2R:6082352-6082410 6 9 965 FBgn0033062 1878.093333 71.69666667 110.3966667 0.004792094 0.125528848 0.081524201 1 10 5.5 0.25 dme-miR-92b-3p 8mer-m1 GTGCAATT 2R 6091023 6091030 - 2R_6091023_6091030_- 0.596578285 0.58171229 0.589145287 0.010511849 EcR FBtr0302439|FBtr0086008|FBtr0086010|FBtr0086012 6087871|6090417|6090417|6090417 6092587|6092587|6092587|6092587 2R - 6091010 6091045 3'utr EcR FlyBase G20035.1 CTTTCTACTTGAATTGTGCAATTTTTTACTTTTACT 14 6091032 0.732402923 6 14 147 1 1.230448921 0 0.214285714 0.352941176 14 0 0 17 2R:6091010-6091045 8 EcR FBtr0086012|FBtr0086008|FBtr0086010|FBtr0302439 6090417|6090417|6090417|6087871 6092587|6092587|6092587|6092587 GTGCAATT 8mer-m1 dme-miR-92b-3p 2R - 6090996 6091041 3'utr EcR FlyBase G15202.2 CTACTTGAATTGTGCAATTTTTTACTTTTACTACTAATCCTAATTT 11 6091032 0.928711765 4 8 120 0.875 0.669006781 0.0625 0.363636364 0.5625 11 0 2 14 2R:6090996-6091041 8 10.5 966 FBgn0000546 917.5266667 23.27333333 35.89 0.011443809 0.451160126 0.292560602 2 2 2 0.25 dme-miR-1003-3p 6mer3-8 ATGTGA 2R 6209910 6209915 - 2R_6209910_6209915_- 0.99163472 0.999017231 0.995325975 0.005220216 l(2)k14710 FBtr0305967|FBtr0086000 6209780|6209780 6210093|6210093 2R - 6209885 6209930 3'utr l(2)k14710 FlyBase G20069.1 GAGCTTGGCTGTATTATGTGAATGAACCATTCTGCTATCTTCCTTA 21 6209908 0.867402234 7 18 156 0.88 1.041392685 0.52 0.19047619 0.32 21 2 1 22 2R:6209885-6209930 6 l(2)k14710 FBtr0086000|FBtr0305967 6209780|6209780 6210093|6210093 ATGTGA 6mer3-8 dme-miR-1003-3p 2R - 6209882 6209930 3'utr l(2)k14710 FlyBase G15222.1 GAGCTTGGCTGTATTATGTGAATGAACCATTCTGCTATCTTCCTTAATC 19 6209925 0.740576723 5 19 158 1 1.361727836 0.217391304 0.210526316 0.347826087 19 0 0 23 2R:6209882-6209930 6 17 967 FBgn0021847 147.6666667 5.836666667 8.94 0.115124153 2.912621359 1.901565996 -7 10 1.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 6626425 6626431 - 2R_6626425_6626431_- 0.672442069 0.671420184 0.671931127 0.000722592 Vha16-1 FBtr0086152|FBtr0086152|FBtr0086152|FBtr0086150|FBtr0086150|FBtr0086150|FBtr0086153|FBtr0086153|FBtr0086153|FBtr0086151|FBtr0086151|FBtr0086151 6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240 6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469 2R - 6626359 6626544 3'utr Vha16-1 FlyBase G20121.3 ACACACATACAAAATGTAACTAAGTCCTACGTTTATTTTTAATTATTGTTCAATTCTAAGAATAATATATTAAAAATTAATAATAATAAATTATATATATAATTATGATTTTTTGTGATAAGAACAGATGGTAATGCAAACAATTACGGTATTGATATACATAATATATACAGAATATATATATAT 408 6626433 0.77285983 31 378 3488 0.928131417 1.509010399 0.223819302 0.159313725 0.295687885 408 22 13 452 2R:6626359-6626544 7 Vha16-1 FBtr0086151|FBtr0086151|FBtr0086151|FBtr0086153|FBtr0086153|FBtr0086153|FBtr0086150|FBtr0086150|FBtr0086150|FBtr0086152|FBtr0086152|FBtr0086152 6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240 6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 6626357 6626457 3'utr Vha16-1 FlyBase G15273.1 AAATTATATATATAATTATGATTTTTTGTGATAAGAACAGATGGTAATGCAAACAATTACGGTATTGATATACATAATATATACAGAATATATATATATAT 263 6626433 0.710250446 20 237 2224 0.92 1.423875743 0.245333333 0.30418251 0.512 263 18 12 345 2R:6626357-6626457 7 283 968 FBgn0262736 36576.97333 1582.373333 2438.476667 0.007737108 0.178845279 0.116056062 2 2 2 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 2R 6642578 6642583 - 2R_6642578_6642583_- 0.737835457 0.983268367 0.860551912 0.173547268 Fmo-2 FBtr0086148 6642416 6642703 2R - 6642543 6642600 3'utr Fmo-2 FlyBase G20143.1 ACGGATTATAACTCAGATGTGTTAATTAATATTTTATAAGAACAATGTAAATCAAAGT 16 6642574 0.98556447 10 15 149 0.944444444 1.230448921 0.277777778 0.125 0.222222222 16 1 0 17 2R:6642543-6642600 6 Fmo-2 FBtr0086148 6642416 6642703 TGTGTT 6mer3-8 dme-miR-317-3p 2R - 6642517 6642599 3'utr Fmo-2 FlyBase G15286.1 CGGATTATAACTCAGATGTGTTAATTAATATTTTATAAGAACAATGTAAATCAAAGTATGTTTTGAACGATTAATTCAAAACG 14 6642575 0.990922515 8 13 135 0.952380952 1.301029996 0.238095238 0.357142857 0.571428571 14 1 0 20 2R:6642517-6642599 6 13 969 FBgn0033079 393.3166667 28.71 43.87 0.033052248 0.452803901 0.296330066 -9 -8 -8.5 0.25 dme-bantam-3p 6mer3-8 TGATCT 2R 6660081 6660086 + 2R_6660081_6660086_+ 0.592701496 0.847152652 0.719927074 0.179924169 sced FBtr0086110|FBtr0336663 6659979|6659979 6660624|6660326 2R + 6660055 6660098 3'utr sced FlyBase G13327.1 ATTTATGTTGTAGTTTCTTGTGAATGTGATCTGATTAGTTCGAC 48 6660075 0.768618275 9 44 517 0.945454545 1.414973348 0.145454545 0.125 0.236363636 48 2 1 52 2R:6660055-6660098 6 sced FBtr0086110|FBtr0336663 6659979|6659979 6660624|6660326 TGATCT 6mer3-8 dme-bantam-3p 2R + 6660006 6660104 3'utr sced FlyBase G10179.1 ATGTTTAACACTTCGCTGTGGACACAAACTGCTTTTTAACCATTTCGCTATTTATGTTGTAGTTTCTTGTGAATGTGATCTGATTAGTTCGACAAGTTG 42 6660075 0.964592412 12 39 419 0.93442623 1.755874856 0.131147541 0.380952381 0.573770492 42 4 0 57 2R:6660006-6660104 6 42.5 970 FBgn0013732 116.0133333 4.383333333 6.713333333 0.366337203 9.69581749 6.330685204 6 6 6 0.25 dme-miR-2535b-3p 6mer3-8 CCGTGA 2R 6660562 6660567 + 2R_6660562_6660567_+ 0.903967975 0.733535791 0.818751883 0.120513764 sced FBtr0086110 6659979 6660624 2R + 6660534 6660581 3'utr sced FlyBase G13331.1 AAGATAGCATAACCAATGCTGAACTGTACCGTGACTAAACCATAAGCT 16 6660558 0.962489818 5 16 84 1 1.255272505 0.055555556 0.0625 0.166666667 16 0 0 18 2R:6660534-6660581 6 sced FBtr0086110 6659979 6660624 CCGTGA 6mer3-8 dme-miR-2535b-3p 2R + 6660538 6660582 3'utr sced FlyBase G10182.1 TAGCATAACCAATGCTGAACTGTACCGTGACTAAACCATAAGCTT 15 6660558 0.892305244 3 15 78 1 1.301029996 0 0.266666667 0.45 15 0 0 20 2R:6660538-6660582 6 15.5 971 FBgn0013732 116.0133333 4.383333333 6.713333333 0.133605333 3.536121673 2.308838133 4 4 4 0.25 dme-miR-184-5p 7mer-m8 TGATAAG 2R 6670437 6670443 - 2R_6670437_6670443_- 0.658974332 0.656174391 0.657574362 0.001979828 Hsepi FBtr0086145|FBtr0302190 6670152|6670152 6671031|6671031 2R - 6670396 6670503 3'utr Hsepi FlyBase G20165.1 AGCGCTCCCACTCAATACTAACTGCCCAAATAACGATGCACGATAATAACGACTTATATATGATAAGCCTGTAATGTAATGTATTGTAGTGTATGCCACTCGAGAATA 17 6670458 0.971457255 10 16 99 0.947368421 1.255272505 0.263157895 0.117647059 0.210526316 17 1 0 18 2R:6670396-6670503 7 Hsepi FBtr0302190|FBtr0086145 6670152|6670152 6671031|6671031 TGATAAG 7mer-m8 dme-miR-184-5p 2R - 6670415 6670470 3'utr Hsepi FlyBase G15304.1 CGATGCACGATAATAACGACTTATATATGATAAGCCTGTAATGTAATGTATTGTAG 7 6670457 0.971527834 5 7 40 1 0.954242509 0.222222222 0.142857143 0.333333333 7 0 0 9 2R:6670415-6670470 7 6 972 FBgn0033087 180.49 7.23 11.15666667 0.033242839 0.829875519 0.53779504 15 14 14.5 0.25 dme-miR-33-5p 6mer2-7 AATGCA 2R 6695459 6695464 - 2R_6695459_6695464_- 0.961488299 0.9576288 0.959558549 0.002729079 Mob4 FBtr0086141|FBtr0307075 6695112|6695112 6695593|6695593 2R - 6695451 6695534 3'utr Mob4 FlyBase G20181.1 ATTTACCAATAGCTTGCAAGTTGGGTTGGCTCACCCTGACAGGGAAACGATTCCACGCGGACCCGACTCTAATGCAGATCTTGT 19 6695463 0.979619965 10 16 110 0.821428571 1.361727836 0.357142857 0.368421053 0.571428571 19 5 0 23 2R:6695451-6695534 6 Mob4 FBtr0086141|FBtr0307075 6695112|6695112 6695593|6695593 AATGCA 6mer2-7 dme-miR-33-5p 2R - 6695448 6695534 3'utr Mob4 FlyBase G15315.1 ATTTACCAATAGCTTGCAAGTTGGGTTGGCTCACCCTGACAGGGAAACGATTCCACGCGGACCCGACTCTAATGCAGATCTTGTATG 11 6695464 0.970090156 7 10 59 0.933333333 0.84509804 0.066666667 0.272727273 0.466666667 11 0 1 14 2R:6695448-6695534 6 6 973 FBgn0259483 539.6566667 46.58333333 71.19333333 0.01111818 0.128801431 0.084277554 -1 0 -0.5 0.25 dme-miR-1012-3p 7mer-A1 TGACTAA 2R 6698613 6698619 + 2R_6698613_6698619_+ 0.823143592 0.805346506 0.814245049 0.01258445 Rab2 FBtr0086124|FBtr0336658 6698543|6698543 6699469|6698844 2R + 6698553 6698641 3'utr Rab2 FlyBase G13358.1 CGCAGATGCCCGATTGCAATTCTGGGATAGGCGCAGCCGCTTCTGTAAAAGCTACTTTAGTGACTAACTAATAGAAGGTAGTTGAAGGA 22 6698609 0.966296488 10 21 142 0.961538462 1.397940009 0.307692308 0.136363636 0.269230769 22 1 0 25 2R:6698553-6698641 7 Rab2 FBtr0086124|FBtr0336658 6698543|6698543 6699469|6698844 TGACTAA 7mer-A1 dme-miR-1012-3p 2R + 6698559 6698638 3'utr Rab2 FlyBase G10197.1 TGCCCGATTGCAATTCTGGGATAGGCGCAGCCGCTTCTGTAAAAGCTACTTTAGTGACTAACTAATAGAAGGTAGTTGAA 18 6698609 0.979494153 5 15 103 0.896551724 1.414973348 0.068965517 0.388888889 0.620689655 18 3 0 26 2R:6698559-6698638 7 11.5 974 FBgn0014009 1265.866667 136.76 209.3033333 0.009084685 0.084088915 0.05494418 4 4 4 0.25 dme-miR-7-5p 6mer3-8 GTCTTC 2R 6700313 6700318 - 2R_6700313_6700318_- 0.983232399 0.989376807 0.986304603 0.004344747 CG45092 FBtr0344559|FBtr0344560|FBtr0344561 6700219|6700219|6699693 6705333|6705333|6705333 2R - 6700308 6700336 3'utr CG45092 FlyBase G20186.1 CAAACGGGTCCCTCAATTGTCTTCTTTAC 7 6700320 0.758022796 2 7 63 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 2R:6700308-6700336 6 CG45092 FBtr0344561|FBtr0344560|FBtr0344559 6699693|6700219|6700219 6705333|6705333|6705333 GTCTTC 6mer3-8 dme-miR-7-5p 2R - 6700305 6700338 3'utr CG45092 FlyBase G15320.1 TGCAAACGGGTCCCTCAATTGTCTTCTTTACAAA 6 6700320 0.874754292 2 6 52 1 0.954242509 0.444444444 0.5 0.666666667 6 0 0 9 2R:6700305-6700338 6 6.5 975 FBgn0266525 326.5166667 7.77 11.99666667 0.0199071 0.836550837 0.541817171 2 2 2 0.25 dme-miR-1012-3p 8mer-A1 TTGACTAA 2R 6700463 6700470 - 2R_6700463_6700470_- 0.35946904 0.450461497 0.404965268 0.064341414 CG45092 FBtr0344559|FBtr0344560|FBtr0344561 6700219|6700219|6699693 6705333|6705333|6705333 2R - 6700450 6700499 3'utr CG45092 FlyBase G20187.1 AAGCTCTAGCCTGTAAGACTATACTTGACTTGACTAATCGTAGCTAAGTA 22 6700475 0.942897846 4 21 165 0.966666667 1.462397998 0 0.272727273 0.466666667 22 1 0 29 2R:6700450-6700499 8 CG45092 FBtr0344561|FBtr0344560|FBtr0344559 6699693|6700219|6700219 6705333|6705333|6705333 TTGACTAA 8mer-A1 dme-miR-1012-3p 2R - 6700452 6700499 3'utr CG45092 FlyBase G15321.1 AAGCTCTAGCCTGTAAGACTATACTTGACTTGACTAATCGTAGCTAAG 16 6700475 0.696402898 6 16 111 1 1.342422681 0 0.3125 0.5 16 0 0 22 2R:6700452-6700499 8 18 976 FBgn0266525 326.5166667 7.77 11.99666667 0.055127354 2.316602317 1.500416782 5 5 5 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 6748728 6748735 + 2R_6748728_6748735_+ 0.512727964 0.53831005 0.525519007 0.018089206 CG3267 FBtr0086126 6748653 6748954 2R + 6748663 6748801 3'utr CG3267 FlyBase G13376.1 TGTATGCTGGAGAAATTTAATCGGAGCGCATTTACAGGCATTTAATGCCTTTATTTCGAAACTGTTGCATTTATTAGCGTTAAGGCAATTGTTAACTGTGTAATGTACAACTGATTGTTTATTAGGAACAGGCGTGTGA 667 6748727 0.986861481 29 646 6148 0.967405476 2.393282651 0.159061278 0.134932534 0.247718383 667 23 2 742 2R:6748663-6748801 8 CG3267 FBtr0086126 6748653 6748954 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 6748671 6748795 3'utr CG3267 FlyBase G10209.1 GGAGAAATTTAATCGGAGCGCATTTACAGGCATTTAATGCCTTTATTTCGAAACTGTTGCATTTATTAGCGTTAAGGCAATTGTTAACTGTGTAATGTACAACTGATTGTTTATTAGGAACAGGC 483 6748727 0.795692984 22 465 4393 0.964238411 2.260071388 0.147019868 0.407867495 0.621192053 483 24 3 728 2R:6748671-6748795 8 538 977 FBgn0042083 366.6133333 20.74 31.70666667 1.46748618 25.94021215 16.96804037 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 6762254 6762260 - 2R_6762254_6762260_- 0.778308112 0.578823609 0.67856586 0.141056843 Epac FBtr0329850|FBtr0329850|FBtr0329850|FBtr0112636|FBtr0112636|FBtr0112636|FBtr0329851|FBtr0329851|FBtr0329851|FBtr0329849|FBtr0329849|FBtr0329849 6761911|6761911|6761911|6761911|6761911|6761911|6761911|6761911|6761911|6759713|6759713|6759713 6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646 2R - 6762230 6762279 3'utr Epac FlyBase G20210.1 AAAACTAAACTTGGACGTGTGTGATACTAAACATTTATAGGAGGCAACAT 46 6762262 0.896325008 7 46 287 1 1.740362689 0.054545455 0.195652174 0.327272727 46 0 0 55 2R:6762230-6762279 7 Epac FBtr0329850|FBtr0329850|FBtr0329850|FBtr0112636|FBtr0112636|FBtr0112636|FBtr0329851|FBtr0329851|FBtr0329851|FBtr0329849|FBtr0329849|FBtr0329849 6761911|6761911|6761911|6761911|6761911|6761911|6761911|6761911|6761911|6759713|6759713|6759713 6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646|6762646 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 6762237 6762280 3'utr Epac FlyBase G15337.1 AAAAACTAAACTTGGACGTGTGTGATACTAAACATTTATAGGAG 40 6762262 0.776554013 7 40 258 1 1.880813592 0.052631579 0.575 0.776315789 40 0 0 76 2R:6762237-6762280 7 42 978 FBgn0085421 11.33333333 0.29 0.44 3.705882353 144.8275862 95.45454545 2 2 2 0.25 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 6762343 6762350 - 2R_6762343_6762350_- 0.600323585 0.599837669 0.600080627 0.000343583 Epac FBtr0329850|FBtr0112636|FBtr0329851|FBtr0329849 6761911|6761911|6761911|6759713 6762646|6762646|6762646|6762646 2R - 6762307 6762422 3'utr Epac FlyBase G20211.1 AGGAACTATCTCAATCTTCTAATGAACTGAAACCCAAACGCATTTTAATGCAAACGAGAAACTTTTTGCTTTAGTACAAAACGATGGAAAAGATGGAAAACAATTTGAAATTCGGC 43 6762352 0.985434524 12 41 334 0.958333333 1.662757832 0.458333333 0.093023256 0.1875 43 2 0 46 2R:6762307-6762422 8 Epac FBtr0329850|FBtr0112636|FBtr0329851|FBtr0329849 6761911|6761911|6761911|6759713 6762646|6762646|6762646|6762646 AGTACAAA 8mer-A1 dme-miR-305-5p 2R - 6762325 6762422 3'utr Epac FlyBase G15338.1 AGGAACTATCTCAATCTTCTAATGAACTGAAACCCAAACGCATTTTAATGCAAACGAGAAACTTTTTGCTTTAGTACAAAACGATGGAAAAGATGGAA 39 6762352 0.739158666 9 33 270 0.898305085 1.72427587 0.372881356 0.358974359 0.576271186 39 6 0 53 2R:6762325-6762422 8 32.5 979 FBgn0085421 11.33333333 0.29 0.44 2.867647059 112.0689655 73.86363636 2 2 2 0.25 dme-miR-1007-3p 8mer-A1 TGAGCTTA 2R 6762546 6762553 - 2R_6762546_6762553_- 0.6175567 0.621936636 0.619746668 0.003097057 Epac FBtr0329850|FBtr0112636|FBtr0329851|FBtr0329849 6761911|6761911|6761911|6759713 6762646|6762646|6762646|6762646 2R - 6762523 6762576 3'utr Epac FlyBase G20213.1 AACCGCAATTAGCTGCACAGTTATGAGCTTAGCCGGGTTGTTGTTGCTTTCCGA 31 6762553 0.82651848 4 31 272 1 1.556302501 0.083333333 0.161290323 0.277777778 31 0 0 36 2R:6762523-6762576 8 Epac FBtr0329850|FBtr0112636|FBtr0329851|FBtr0329849 6761911|6761911|6761911|6759713 6762646|6762646|6762646|6762646 TGAGCTTA 8mer-A1 dme-miR-1007-3p 2R - 6762528 6762575 3'utr Epac FlyBase G15340.1 ACCGCAATTAGCTGCACAGTTATGAGCTTAGCCGGGTTGTTGTTGCTT 27 6762553 0.818818673 4 26 227 0.973684211 1.267171728 0.236842105 0.296296296 0.5 27 0 1 37 2R:6762528-6762575 8 28.5 980 FBgn0085421 11.33333333 0.29 0.44 2.514705882 98.27586207 64.77272727 0 0 0 0.25 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 6814423 6814430 + 2R_6814423_6814430_+ 0.605445351 0.60478406 0.605114706 0.00046761 koi FBtr0335515|FBtr0335517|FBtr0335516 6814313|6814313|6814313 6814812|6814812|6814812 2R + 6814349 6814473 3'utr koi FlyBase G13408.1 ATTTAGTGATCTGGTTGGGTGCAACGCCCCTTGCACTTAGACAAATATGAGAAACTTTCTTTATGAACAATATGAGTACAAAATAAAGCATTTGATCCGTTTTTTGTCCGTCTGCTTGACCCGCA 49 6814421 0.781396755 20 45 341 0.945454545 1.716003344 0.109090909 0.12244898 0.218181818 49 3 0 52 2R:6814349-6814473 8 koi FBtr0335516|FBtr0335515|FBtr0335517 6814313|6814313|6814313 6814812|6814812|6814812 AGTACAAA 8mer-A1 dme-miR-305-5p 2R + 6814396 6814437 3'utr koi FlyBase G10230.1 TGAGAAACTTTCTTTATGAACAATATGAGTACAAAATAAAGC 14 6814421 0.698419374 5 12 70 0.769230769 1.301029996 0.192307692 0.571428571 0.769230769 14 6 0 20 2R:6814396-6814437 8 15 981 FBgn0265003 944.7366667 44.58333333 68.22333333 0.01587744 0.336448598 0.219866126 2 2 2 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 6818189 6818194 + 2R_6818189_6818194_+ 0.602084233 0.584543788 0.59331401 0.012402936 koi FBtr0335514|FBtr0335514|FBtr0335514|FBtr0335512|FBtr0335512|FBtr0335512|FBtr0335513|FBtr0335513|FBtr0335513 6817004|6817004|6817004|6817004|6817004|6817004|6817004|6817004|6817004 6818199|6818199|6818199|6818199|6818199|6818199|6818199|6818199|6818199 2R + 6818161 6818199 3'utr koi FlyBase G13421.1 TTCACCATTTTTAACAATAAACACATTGCTGTGAAAAAA 79 6818186 0.764177338 3 79 334 1 1.973127854 0.010638298 0.164556962 0.29787234 79 0 0 94 2R:6818161-6818199 6 koi FBtr0335513|FBtr0335513|FBtr0335513|FBtr0335514|FBtr0335514|FBtr0335514|FBtr0335512|FBtr0335512|FBtr0335512 6817004|6817004|6817004|6817004|6817004|6817004|6817004|6817004|6817004 6818199|6818199|6818199|6818199|6818199|6818199|6818199|6818199|6818199 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 6818154 6818199 3'utr koi FlyBase G10243.1 AAGGTTTTTCACCATTTTTAACAATAAACACATTGCTGTGAAAAAA 33 6818186 0.948439318 4 33 149 1 1.716003344 0.076923077 0.424242424 0.634615385 33 0 0 52 2R:6818154-6818199 6 55.5 982 FBgn0265003 944.7366667 44.58333333 68.22333333 0.058746529 1.244859813 0.813504666 3 3 3 0.25 dme-bantam-3p 6mer3-8 TGATCT 2R 6876228 6876233 - 2R_6876228_6876233_- 0.551150813 0.492480833 0.521815823 0.041485955 Spn42Da FBtr0086201|FBtr0086198|FBtr0086205|FBtr0300336|FBtr0086200|FBtr0086202|FBtr0086199 6876151|6876151|6876151|6876151|6876151|6876151|6876151 6876389|6876389|6876596|6876596|6876596|6876596|6876596 2R - 6876162 6876261 3'utr Spn42Da FlyBase G20243.1 CACAAAATTATAGTCTGTGCGCAATTGATGATCTTATATATACACTTAATATTTTTATACTAACCAAGCATGTAGCCGTAGCCTCAATAAAGTCTAAAAG 262 6876233 0.985890142 17 254 2158 0.965517241 2.011429462 0.520376176 0.187022901 0.332288401 262 9 2 308 2R:6876162-6876261 6 Spn42Da FBtr0300336|FBtr0086205|FBtr0086198|FBtr0086201|FBtr0086199|FBtr0086202|FBtr0086200 6876151|6876151|6876151|6876151|6876151|6876151|6876151 6876596|6876596|6876389|6876389|6876596|6876596|6876596 TGATCT 6mer3-8 dme-bantam-3p 2R - 6876210 6876261 3'utr Spn42Da FlyBase G15364.2 CACAAAATTATAGTCTGTGCGCAATTGATGATCTTATATATACACTTAATAT 211 6876233 0.708994829 14 201 1631 0.962848297 2.191730393 0.551083591 0.379146919 0.594427245 211 11 1 311 2R:6876210-6876261 6 201 983 FBgn0265137 341.8233333 23.49666667 36.20333333 0.588023053 8.55440488 5.551974956 0 0 0 0.25 dme-miR-980-3p 6mer3-8 GGCAGC 2R 6876405 6876410 - 2R_6876405_6876410_- 0.732133573 0.728399127 0.73026635 0.00264069 Spn42Da FBtr0086205|FBtr0300336|FBtr0086200|FBtr0086202|FBtr0086199 6876151|6876151|6876151|6876151|6876151 6876596|6876596|6876596|6876596|6876596 2R - 6876339 6876435 3'utr Spn42Da FlyBase G20244.2 CAAGGACTCAACCGCTCTCTTCGCTGGCAGCATAAAGAAACTCTAAATAGGCAAACATACTAACCAATCCACAATGTTACTCGAGGGTCTCGTATTC 70 6876411 0.863574409 12 65 403 0.928571429 1.892094603 0.238095238 0.157142857 0.297619048 70 6 0 78 2R:6876339-6876435 6 Spn42Da FBtr0300336|FBtr0086205|FBtr0086199|FBtr0086202|FBtr0086200 6876151|6876151|6876151|6876151|6876151 6876596|6876596|6876596|6876596|6876596 GGCAGC 6mer3-8 dme-miR-980-3p 2R - 6876332 6876434 3'utr Spn42Da FlyBase G15365.1 AAGGACTCAACCGCTCTCTTCGCTGGCAGCATAAAGAAACTCTAAATAGGCAAACATACTAACCAATCCACAATGTTACTCGAGGGTCTCGTATTCATTTAAC 54 6876411 0.91980082 10 47 306 0.891566265 1.392110465 0.301204819 0.333333333 0.56626506 54 7 2 74 2R:6876332-6876434 6 40 984 FBgn0265137 341.8233333 23.49666667 36.20333333 0.117019513 1.70236913 1.104870638 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 6972183 6972189 - 2R_6972183_6972189_- 0.775564781 0.675126851 0.725345816 0.07102032 Cyp6u1 FBtr0345011|FBtr0345011|FBtr0345011|FBtr0345802|FBtr0345802|FBtr0345802|FBtr0086185|FBtr0086185|FBtr0086185 6972110|6972110|6972110|6971994|6971994|6971994|6972110|6972110|6972110 6972304|6972304|6972304|6972304|6972304|6972304|6972304|6972304|6972304 2R - 6972168 6972228 3'utr Cyp6u1 FlyBase G20259.1 ATGCACCTTTTTCGTTGATTTTCCTAAGCTGTGGACTTGTGTGATAATGCTGACGATGACT 42 6972191 0.634960819 9 38 366 0.901960784 1.361727836 0.235294118 0.19047619 0.333333333 42 4 1 46 2R:6972168-6972228 7 Cyp6u1 FBtr0086185|FBtr0086185|FBtr0086185|FBtr0345011|FBtr0345011|FBtr0345011|FBtr0345802|FBtr0345802|FBtr0345802 6972110|6972110|6972110|6972110|6972110|6972110|6971994|6971994|6971994 6972304|6972304|6972304|6972304|6972304|6972304|6972304|6972304|6972304 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 6972162 6972215 3'utr Cyp6u1 FlyBase G15377.1 GTTGATTTTCCTAAGCTGTGGACTTGTGTGATAATGCTGACGATGACTTTTATA 12 6972192 0.983267933 7 12 91 1 1.146128036 0.571428571 0.166666667 0.285714286 12 0 0 14 2R:6972162-6972215 7 1.5 985 FBgn0033121 218 13.62333333 20.59666667 0.006880734 0.110105212 0.072827318 2 3 2.5 0.25 dme-miR-1008-3p 7mer-m8 AGCTGTG 2R 6972196 6972202 - 2R_6972196_6972202_- 0.606767572 0.378774384 0.492770978 0.161215538 Cyp6u1 FBtr0345011|FBtr0345802|FBtr0086185 6972110|6971994|6972110 6972304|6972304|6972304 2R - 6972168 6972228 3'utr Cyp6u1 FlyBase G20259.1 ATGCACCTTTTTCGTTGATTTTCCTAAGCTGTGGACTTGTGTGATAATGCTGACGATGACT 42 6972191 0.634960819 9 38 366 0.901960784 1.361727836 0.235294118 0.19047619 0.333333333 42 4 1 46 2R:6972168-6972228 7 Cyp6u1 FBtr0086185|FBtr0345011|FBtr0345802 6972110|6972110|6971994 6972304|6972304|6972304 AGCTGTG 7mer-m8 dme-miR-1008-3p 2R - 6972162 6972215 3'utr Cyp6u1 FlyBase G15377.1 GTTGATTTTCCTAAGCTGTGGACTTGTGTGATAATGCTGACGATGACTTTTATA 12 6972192 0.983267933 7 12 91 1 1.146128036 0.571428571 0.166666667 0.285714286 12 0 0 14 2R:6972162-6972215 7 5.5 986 FBgn0033121 218 13.62333333 20.59666667 0.025229358 0.403719109 0.267033501 -11 -10 -10.5 0.25 dme-miR-12-5p 6mer2-7 ATACTC 2R 7273157 7273162 - 2R_7273157_7273162_- 0.884103116 0.865168038 0.874635577 0.013389138 Br140 FBtr0345370|FBtr0089021 7272273|7272531 7273271|7273271 2R - 7273074 7273308 stop_codon Br140 FlyBase G20299.1 CGACTTGGAGGGCCAAGGACCCGATCCGATCATGTGAAAGCTGATGGCCCGATTGCAACTGTAGGCGCCGCTCGAAAGAATTCAGCCATTTAGTTAGCTCCCCCACAAGGGATCGCCGTATTTTTATATCTCGTTGTTGTTACTTGATACTCGAAGATGACGCAGTTGAAGAAGGCCCTCCATTAGAGTATTTCGTTGGCGAATTTCCAATTTGCACTGCAAGTGTCTTTAATTT 88 7273164 0.98305302 22 84 635 0.963302752 2.021189299 0.412844037 0.215909091 0.366972477 88 4 0 105 2R:7273074-7273308 6 Br140 FBtr0089021|FBtr0345370 7272531|7272273 7273271|7273271 ATACTC 6mer2-7 dme-miR-12-5p 2R - 7273107 7273183 3'utr Br140 FlyBase G15403.1 ATATCTCGTTGTTGTTACTTGATACTCGAAGATGACGCAGTTGAAGAAGGCCCTCCATTAGAGTATTTCGTTGGCGA 58 7273164 0.768418041 8 52 450 0.926829268 1.278753601 0.353658537 0.293103448 0.5 58 3 3 76 2R:7273107-7273183 6 45 987 FBgn0033155 560.6533333 12.28666667 18.82333333 0.080263502 3.662506782 2.390649903 2 2 2 0.25 dme-bantam-3p 6mer3-8 TGATCT 2R 7319607 7319612 - 2R_7319607_7319612_- 0.966166471 0.974511996 0.970339234 0.00590116 Dscam1 FBtr0111083|FBtr0111055|FBtr0111050|FBtr0111066|FBtr0111070|FBtr0111077|FBtr0111100|FBtr0111076|FBtr0111060|FBtr0306779|FBtr0089019|FBtr0111078|FBtr0089020|FBtr0111058|FBtr0111052|FBtr0111087|FBtr0306786|FBtr0306780|FBtr0111085|FBtr0111065|FBtr0111099|FBtr0306772|FBtr0111097|FBtr0306774|FBtr0306783|FBtr0111057|FBtr0306771|FBtr0111061|FBtr0089018|FBtr0111102|FBtr0111068|FBtr0306784|FBtr0306777|FBtr0306778|FBtr0111101|FBtr0306787|FBtr0111082|FBtr0111074|FBtr0111098|FBtr0111096|FBtr0306782|FBtr0111073|FBtr0111088|FBtr0334801|FBtr0111064|FBtr0111062|FBtr0111049|FBtr0111072|FBtr0111084|FBtr0111081|FBtr0111089|FBtr0111071|FBtr0306770|FBtr0111092|FBtr0111051|FBtr0306773|FBtr0111069|FBtr0111063|FBtr0306781|FBtr0306776|FBtr0111053|FBtr0111080|FBtr0111059|FBtr0111056|FBtr0111075|FBtr0089016|FBtr0306769|FBtr0306775|FBtr0111067|FBtr0111079|FBtr0306767|FBtr0111094|FBtr0306768|FBtr0306785|FBtr0111054 7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7317922|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552 7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320675|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682 2R - 7319560 7319710 3'utr Dscam1 FlyBase G20310.1 ACGATTTATTAAACCAATTCTGATATAGACCGTTCTGAACATGAGTTATACGCATTTGAAGCTTTAAGAGAACCTGAAATTGTTTATTTCACTTCATTTGATCTATCCTAAGTTATTAGTTCATAAGTTGCTAAATATATGATTTTGATTT 150 7319613 0.991665558 26 144 1585 0.966666667 1.763427994 0.055555556 0.146666667 0.288888889 150 4 2 174 2R:7319560-7319710 6 Dscam1 FBtr0306787|FBtr0111101|FBtr0111074|FBtr0111082|FBtr0111102|FBtr0111063|FBtr0306778|FBtr0111053|FBtr0306777|FBtr0111068|FBtr0306771|FBtr0111057|FBtr0089018|FBtr0111061|FBtr0089016|FBtr0111099|FBtr0111079|FBtr0306783|FBtr0306774|FBtr0111097|FBtr0306780|FBtr0306786|FBtr0111065|FBtr0111085|FBtr0089020|FBtr0306782|FBtr0111078|FBtr0089019|FBtr0111052|FBtr0111058|FBtr0111076|FBtr0111100|FBtr0306779|FBtr0111060|FBtr0111050|FBtr0111055|FBtr0111084|FBtr0111083|FBtr0111077|FBtr0111066|FBtr0111094|FBtr0306767|FBtr0111054|FBtr0306785|FBtr0306768|FBtr0306775|FBtr0306769|FBtr0306772|FBtr0111067|FBtr0111080|FBtr0111075|FBtr0111056|FBtr0111059|FBtr0306781|FBtr0111069|FBtr0306776|FBtr0306784|FBtr0111092|FBtr0306770|FBtr0111071|FBtr0306773|FBtr0111051|FBtr0111081|FBtr0111072|FBtr0111089|FBtr0111070|FBtr0111064|FBtr0334801|FBtr0111088|FBtr0111049|FBtr0111062|FBtr0111096|FBtr0111098|FBtr0111087|FBtr0111073 7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7317922|7319552|7319552|7319552|7319552|7319552|7319552|7319552 7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320675|7320682|7320682|7320682|7320682|7320682|7320682|7320682 TGATCT 6mer3-8 dme-bantam-3p 2R - 7319554 7319697 3'utr Dscam1 FlyBase G15417.1 CCAATTCTGATATAGACCGTTCTGAACATGAGTTATACGCATTTGAAGCTTTAAGAGAACCTGAAATTGTTTATTTCACTTCATTTGATCTATCCTAAGTTATTAGTTCATAAGTTGCTAAATATATGATTTTGATTTTATTTT 86 7319613 0.990918916 18 83 870 0.946564885 2.093421685 0.076335878 0.348837209 0.572519084 86 7 0 124 2R:7319554-7319697 6 91.5 988 FBgn0033159 794.49 12.18 18.55333333 0.115168221 7.512315271 4.931728351 1 1 1 0.25 dme-miR-79-3p 6mer3-8 TAGCTT 2R 7320640 7320645 - 2R_7320640_7320645_- 0.968611718 0.766607827 0.867609772 0.142838328 Dscam1 FBtr0111083|FBtr0111055|FBtr0111050|FBtr0111066|FBtr0111070|FBtr0111077|FBtr0111100|FBtr0111076|FBtr0111060|FBtr0306779|FBtr0089019|FBtr0111078|FBtr0089020|FBtr0111058|FBtr0111052|FBtr0111087|FBtr0306786|FBtr0306780|FBtr0111085|FBtr0111065|FBtr0111099|FBtr0306772|FBtr0111097|FBtr0306774|FBtr0306783|FBtr0111057|FBtr0306771|FBtr0111061|FBtr0089018|FBtr0111102|FBtr0111068|FBtr0306784|FBtr0306777|FBtr0306778|FBtr0111101|FBtr0306787|FBtr0111082|FBtr0111074|FBtr0111098|FBtr0111096|FBtr0306782|FBtr0111073|FBtr0111088|FBtr0334801|FBtr0111064|FBtr0111062|FBtr0111049|FBtr0111072|FBtr0111084|FBtr0111081|FBtr0111089|FBtr0111071|FBtr0306770|FBtr0111092|FBtr0111051|FBtr0306773|FBtr0111069|FBtr0111063|FBtr0306781|FBtr0306776|FBtr0111053|FBtr0111080|FBtr0111059|FBtr0111056|FBtr0111075|FBtr0089016|FBtr0306769|FBtr0306775|FBtr0111067|FBtr0111079|FBtr0306767|FBtr0111094|FBtr0306768|FBtr0306785|FBtr0111054 7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7317922|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552 7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320675|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682 2R - 7320601 7320707 stop_codon Dscam1 FlyBase G20314.1 AGCCTACGATACTATGGCAGTGTAATTTGTAAGCGCCCTCTGCGGCGGTGGGCGTGGCATTTTAGCTTAGTGTTTTAGGTGCATGAAGTGCGTGGGAGTTGAATGAC 32 7320646 0.815431043 14 30 234 0.914285714 1.505149978 0.228571429 0.09375 0.171428571 32 3 0 32 2R:7320601-7320707 6 Dscam1 FBtr0306787|FBtr0111101|FBtr0111074|FBtr0111082|FBtr0111102|FBtr0111063|FBtr0306778|FBtr0111053|FBtr0306777|FBtr0111068|FBtr0306771|FBtr0111057|FBtr0089018|FBtr0111061|FBtr0089016|FBtr0111099|FBtr0111079|FBtr0306783|FBtr0306774|FBtr0111097|FBtr0306780|FBtr0306786|FBtr0111065|FBtr0111085|FBtr0089020|FBtr0306782|FBtr0111078|FBtr0089019|FBtr0111052|FBtr0111058|FBtr0111076|FBtr0111100|FBtr0306779|FBtr0111060|FBtr0111050|FBtr0111055|FBtr0111084|FBtr0111083|FBtr0111077|FBtr0111066|FBtr0111094|FBtr0306767|FBtr0111054|FBtr0306785|FBtr0306768|FBtr0306775|FBtr0306769|FBtr0306772|FBtr0111067|FBtr0111080|FBtr0111075|FBtr0111056|FBtr0111059|FBtr0306781|FBtr0111069|FBtr0306776|FBtr0306784|FBtr0111092|FBtr0306770|FBtr0111071|FBtr0306773|FBtr0111051|FBtr0111081|FBtr0111072|FBtr0111089|FBtr0111070|FBtr0111064|FBtr0334801|FBtr0111088|FBtr0111049|FBtr0111062|FBtr0111096|FBtr0111098|FBtr0111087|FBtr0111073 7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7319552|7317922|7319552|7319552|7319552|7319552|7319552|7319552|7319552 7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320682|7320675|7320682|7320682|7320682|7320682|7320682|7320682|7320682 TAGCTT 6mer3-8 dme-miR-79-3p 2R - 7320592 7320708 stop_codon Dscam1 FlyBase G15423.1 CAGCCTACGATACTATGGCAGTGTAATTTGTAAGCGCCCTCTGCGGCGGTGGGCGTGGCATTTTAGCTTAGTGTTTTAGGTGCATGAAGTGCGTGGGAGTTGAATGACACTTAGAGA 24 7320646 0.974802603 12 22 136 1 1.602059991 0.325 0.5 0.7 24 0 0 40 2R:7320592-7320708 6 11 989 FBgn0033159 794.49 12.18 18.55333333 0.01384536 0.903119869 0.592885375 1 1 1 0.25 dme-miR-7-5p 7mer-m8 GTCTTCC 2R 7382570 7382576 - 2R_7382570_7382576_- 0.642733838 0.675647122 0.65919048 0.023273218 cos FBtr0089015|FBtr0336916 7382174|7382521 7383196|7383196 2R - 7382528 7382609 3'utr cos FlyBase G20350.1 TGTTAGTTTTAGCTTAGTTGTAAACACTATTGTGTCTTCCCTCGAATTTTAATTGACCTTCGATACCAATTACAACATACGT 35 7382578 0.847022236 10 35 328 1 1.633468456 0.162790698 0.171428571 0.325581395 35 0 0 43 2R:7382528-7382609 7 cos FBtr0089015|FBtr0336916 7382174|7382521 7383196|7383196 GTCTTCC 7mer-m8 dme-miR-7-5p 2R - 7382547 7382600 3'utr cos FlyBase G15442.1 TAGCTTAGTTGTAAACACTATTGTGTCTTCCCTCGAATTTTAATTGACCTTCGA 22 7382577 0.699560207 5 18 214 0.827586207 1.380211242 0.103448276 0.318181818 0.482758621 22 5 0 24 2R:7382547-7382600 7 25 990 FBgn0000352 545 14.08 21.54666667 0.04587156 1.775568182 1.160272277 2 1 1.5 0.25 dme-miR-1002-5p 8mer-A1 CTACTTAA 2R 7382727 7382734 - 2R_7382727_7382734_- 0.577124527 0.616290139 0.596707333 0.027694261 cos FBtr0089015|FBtr0336916 7382174|7382521 7383196|7383196 2R - 7382689 7382781 3'utr cos FlyBase G20351.1 ATGAAAGTAACTATCCTCATGAGATTCAACCGTAAAGACTTGACCTGCTACTTAAGATACTCGCAAGACAAACCGTACACAAAACTCGCTCAA 32 7382762 0.971748242 13 31 181 0.972972973 1.255272505 0.081081081 0.09375 0.216216216 32 0 1 36 2R:7382689-7382781 8 cos FBtr0089015|FBtr0336916 7382174|7382521 7383196|7383196 CTACTTAA 8mer-A1 dme-miR-1002-5p 2R - 7382712 7382778 3'utr cos FlyBase G15444.1 AAAGTAACTATCCTCATGAGATTCAACCGTAAAGACTTGACCTGCTACTTAAGATACTCGCAAGACA 23 7382737 0.749251079 11 21 129 0.891891892 1.51851394 0.216216216 0.52173913 0.702702703 23 4 0 33 2R:7382712-7382778 8 15 991 FBgn0000352 545 14.08 21.54666667 0.027522936 1.065340909 0.696163366 28 3 15.5 0.25 dme-miR-1012-3p 8mer-A1 TTGACTAA 2R 7398357 7398364 - 2R_7398357_7398364_- 0.621910833 0.613910223 0.617910528 0.005657279 Eaf FBtr0089009|FBtr0089006|FBtr0089008|FBtr0089007 7398224|7398224|7398224|7396848 7398395|7398395|7398395|7398395 2R - 7398347 7398493 stop_codon Eaf FlyBase G20380.1 AGTCCGGCATTTATGCGTCCAATGGTGGCTTTCCAAACGATTTCCTACAAAACGATCTGCAGTTGTCGTCAAATTCGTCCGACGATGACGACGACTAGCTGTTTAAAGTTTGATCTTATTTGCCTTCTTTTGACTAAACCAACGACA 102 7398375 0.855002773 23 100 868 0.98245614 1.748188027 0.166666667 0.107843137 0.201754386 102 1 1 112 2R:7398347-7398493 8 Eaf FBtr0089008|FBtr0089007|FBtr0089009|FBtr0089006 7398224|7396848|7398224|7398224 7398395|7398395|7398395|7398395 TTGACTAA 8mer-A1 dme-miR-1012-3p 2R - 7398306 7398421 stop_codon Eaf FlyBase G15459.1 ATTCGTCCGACGATGACGACGACTAGCTGTTTAAAGTTTGATCTTATTTGCCTTCTTTTGACTAAACCAACGACAACAAGAGCAACAACAATTATTGATATTTTGTCTATATGCGT 66 7398383 0.97971807 13 64 588 0.978723404 1.963787827 0.234042553 0.333333333 0.531914894 66 2 0 92 2R:7398306-7398421 8 19 992 FBgn0033166 365.6833333 12.62666667 19.28666667 0.051957522 1.504751848 0.985136536 11 19 15 0.25 dme-miR-252-5p 7mer-m8 GTACTTA 2R 7444798 7444804 - 2R_7444798_7444804_- 0.548339636 0.550078565 0.5492091 0.001229659 kappaB-Ras FBtr0299801|FBtr0089002 7443822|7443822 7445025|7445025 2R - 7444781 7444879 5'utr kappaB-Ras FlyBase G20390.1 GTATTGATCCATTTAGAGTCTACTTGCCTTGTATTAACTGTTGTGCTTTAATGTGGGCCAGAGCCCAAGCCACTTGTACTTATGTCTCTTTGTGTGTGT 20 7444805 0.855629075 10 19 185 1 1.342422681 0.227272727 0.05 0.136363636 20 0 0 22 2R:7444781-7444879 7 kappaB-Ras FBtr0089002|FBtr0299801 7443822|7443822 7445025|7445025 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 7444792 7444845 5'utr kappaB-Ras FlyBase G15466.1 TAACTGTTGTGCTTTAATGTGGGCCAGAGCCCAAGCCACTTGTACTTATGTCTC 6 7444805 0.976794131 2 6 44 1 0.954242509 0.111111111 0.333333333 0.555555556 6 0 0 9 2R:7444792-7444845 7 6.5 993 FBgn0040513 68.97 4.683333333 7.146666667 0.094243874 1.387900356 0.909514925 1 1 1 0.25 dme-miR-317-3p 6mer2-7 GTGTTC 2R 7449260 7449265 + 2R_7449260_7449265_+ 0.546792257 0.584904739 0.565848498 0.026949536 CG11125 FBtr0336911|FBtr0088974 7449165|7449165 7449995|7449415 2R + 7449195 7449277 3'utr CG11125 FlyBase G13525.1 ATTAAAGCATTCCATCGACTGACTGACCGAGCGAGCTACTGGAATCTTGGATTTGCAAAACACGCGTGTTCCTTTCAACCATG 49 7449261 0.797983302 11 42 210 0.881355932 1.238882089 0.406779661 0.183673469 0.322033898 49 5 2 52 2R:7449195-7449277 6 CG11125 FBtr0088974|FBtr0336911 7449165|7449165 7449415|7449995 GTGTTC 6mer2-7 dme-miR-317-3p 2R + 7449195 7449277 3'utr CG11125 FlyBase G10307.1 ATTAAAGCATTCCATCGACTGACTGACCGAGCGAGCTACTGGAATCTTGGATTTGCAAAACACGCGTGTTCCTTTCAACCATG 31 7449267 0.620719046 13 27 150 0.921568627 1.371067862 0.411764706 0.387096774 0.62745098 31 3 1 47 2R:7449195-7449277 6 9 994 FBgn0033174 169.62 12.60333333 19.33 0.053059781 0.7140968 0.465597517 -1 -7 -4 0.25 dme-miR-13b-2-5p 7mer-A1 TTGACGA 2R 7478960 7478966 - 2R_7478960_7478966_- 0.778815966 0.760154481 0.769485224 0.013195673 wech FBtr0300082 7478851 7483393 2R - 7478955 7478985 3'utr wech FlyBase G20448.1 AGCGTACATAGGTGTGGACTTGACGAGACAA 6 7478969 0.853788871 4 5 27 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2R:7478955-7478985 7 wech FBtr0300082 7478851 7483393 TTGACGA 7mer-A1 dme-miR-13b-2-5p 2R - 7478951 7479020 3'utr wech FlyBase G15509.1 TTATATACCCGAATATATATATATATATATATACAAGCGTACATAGGTGTGGACTTGACGAGACAAGAGT 9 7478971 0.971651016 5 9 57 1 1.079181246 0.083333333 0.222222222 0.416666667 9 0 0 12 2R:7478951-7479020 7 5.5 995 FBgn0259745 2441.89 39.74 61.13333333 0.002252354 0.138399597 0.089967285 3 5 4 0.25 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 7479805 7479812 - 2R_7479805_7479812_- 0.575123688 0.582079354 0.578601521 0.004918423 wech FBtr0300082 7478851 7483393 2R - 7479677 7479854 3'utr wech FlyBase G20454.1 AAATACACGTACATAACATATGTAATAATTATGGAGCAATTGAGTACAAAACGAGTACAAATTTAAATTATAAGCCAGATCGGAGGACACACACGGACACACACCGCTTAAGTTAAACCATACACGGAGCAGTTGAAATATTGATAGGCCAGCTACTGGTTTCGCATAGCAAGTACAG 87 7479815 0.946764696 16 76 320 0.821428571 1.185636577 0.151785714 0.206896552 0.383928571 87 15 5 92 2R:7479677-7479854 8 wech FBtr0300082 7478851 7483393 AGTACAAA 8mer-A1 dme-miR-305-5p 2R - 7479668 7479830 3'utr wech FlyBase G15514.1 ATAATTATGGAGCAATTGAGTACAAAACGAGTACAAATTTAAATTATAAGCCAGATCGGAGGACACACACGGACACACACCGCTTAAGTTAAACCATACACGGAGCAGTTGAAATATTGATAGGCCAGCTACTGGTTTCGCATAGCAAGTACAGCATGTACTC 62 7479815 0.955929955 14 54 250 0.87755102 1.457377197 0.306122449 0.403225806 0.62244898 62 10 2 86 2R:7479668-7479830 8 56.5 996 FBgn0259745 2441.89 39.74 61.13333333 0.023137815 1.421741319 0.924209378 3 3 3 0.25 dme-miR-970-3p 6mer3-8 TCTTAT 2R 7480160 7480165 - 2R_7480160_7480165_- 0.991320649 0.998761303 0.995040976 0.005261369 wech FBtr0300083|FBtr0300082 7480093|7478851 7483393|7483393 2R - 7480141 7480200 5'utr wech FlyBase G20456.1 AATCGATCGACGATGCTAAAGCAAACGGAATGAACTCTTATCAAAATACAATTTTGAGTA 63 7480163 0.775571462 6 62 314 0.985714286 1.838849091 0.057142857 0.111111111 0.2 63 1 0 69 2R:7480141-7480200 6 wech FBtr0300082|FBtr0300083 7478851|7480093 7483393|7483393 TCTTAT 6mer3-8 dme-miR-970-3p 2R - 7480139 7480196 5'utr wech FlyBase G15516.1 GATCGACGATGCTAAAGCAAACGGAATGAACTCTTATCAAAATACAATTTTGAGTAAT 43 7480164 0.951826613 5 41 195 0.963636364 1.72427587 0.2 0.23255814 0.4 43 2 0 53 2R:7480139-7480196 6 50 997 FBgn0259745 2441.89 39.74 61.13333333 0.020475943 1.258178158 0.817884406 -2 -1 -1.5 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 2R 7480674 7480679 - 2R_7480674_7480679_- 0.932476434 0.943729501 0.938102967 0.007957143 wech FBtr0300083|FBtr0300082 7480093|7478851 7483393|7483393 2R - 7480671 7480727 5'utr wech FlyBase G20459.1 GTTAGACACAACCAATTACTACAAGTCATGAGGATACTGAACAATTTGCCAAAGGCT 7 7480682 0.946327776 5 7 32 1 1.041392685 0.363636364 0.285714286 0.545454545 7 0 0 11 2R:7480671-7480727 6 wech FBtr0300082|FBtr0300083 7478851|7480093 7483393|7483393 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 7480658 7480692 5'utr wech FlyBase G15518.1 ACTGAACAATTTGCCAAAGGCTAAGAATCAAAAGG 8 7480681 0.932466938 2 7 29 1 1.079181246 0.083333333 0.375 0.583333333 8 0 0 12 2R:7480658-7480692 6 5 998 FBgn0259745 2441.89 39.74 61.13333333 0.002047594 0.125817816 0.081788441 3 2 2.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2R 7481165 7481170 - 2R_7481165_7481170_- 0.994945433 0.987674151 0.991309792 0.005141515 wech FBtr0300083|FBtr0300083|FBtr0300083|FBtr0300082|FBtr0300082|FBtr0300082 7480093|7480093|7480093|7478851|7478851|7478851 7483393|7483393|7483393|7483393|7483393|7483393 2R - 7481155 7481209 5'utr wech FlyBase G20462.1 TTTTATCCAATCGTACACCTTGAAGCGCCGTTCATTTCTTGTGATCCAGATCGAA 22 7481172 0.75689083 7 17 169 0.791666667 1.278753601 0.041666667 0.090909091 0.166666667 22 5 0 19 2R:7481155-7481209 6 wech FBtr0300082|FBtr0300082|FBtr0300082|FBtr0300083|FBtr0300083|FBtr0300083 7478851|7478851|7478851|7480093|7480093|7480093 7483393|7483393|7483393|7483393|7483393|7483393 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 7481149 7481205 5'utr wech FlyBase G15520.1 ATCCAATCGTACACCTTGAAGCGCCGTTCATTTCTTGTGATCCAGATCGAATCATTC 9 7481173 0.991900533 5 8 81 0.916666667 0.740362689 0.416666667 0.333333333 0.5 9 0 1 11 2R:7481149-7481205 6 7.5 999 FBgn0259745 2441.89 39.74 61.13333333 0.003071391 0.188726724 0.122682661 2 3 2.5 0.25 dme-miR-317-3p 8mer-A1 TGTGTTCA 2R 7481615 7481622 - 2R_7481615_7481622_- 0.538929814 0.541557827 0.540243821 0.001858277 wech FBtr0300083|FBtr0300082 7480093|7478851 7483393|7483393 2R - 7481576 7481640 5'utr wech FlyBase G20464.2 CGTTCTATTCTTTGTCCTTGTGTTCAAACCCGACTTCAACGGATCGACGGAGATGATGATACATA 48 7481623 0.895786489 5 45 423 0.948275862 1.439332694 0.103448276 0.104166667 0.25862069 48 2 1 55 2R:7481576-7481640 8 wech FBtr0300082|FBtr0300083 7478851|7480093 7483393|7483393 TGTGTTCA 8mer-A1 dme-miR-317-3p 2R - 7481602 7481634 5'utr wech FlyBase G15522.2 ATTCTTTGTCCTTGTGTTCAAACCCGACTTCAA 26 7481623 0.713993729 3 25 210 0.971428571 1.531478917 0.028571429 0.192307692 0.4 26 1 0 34 2R:7481602-7481634 8 33.5 1000 FBgn0259745 2441.89 39.74 61.13333333 0.013718882 0.842979366 0.547982552 1 1 1 0.25 dme-miR-14-3p 8mer-A1 AAGACTGA 2R 7482500 7482507 - 2R_7482500_7482507_- 0.643523686 0.643565184 0.643544435 2.93E-05 wech FBtr0300084|FBtr0300083|FBtr0300080|FBtr0300082 7481874|7480093|7481874|7478851 7483393|7483393|7483393|7483393 2R - 7482445 7482554 3'utr wech FlyBase G20470.1 AAGAAAATATTGATGGAACCCGCTGACTTTTCGTTGAACTTTATACAAAGACTGATTAACTAAACCGCAATTTCGGAGCCAACTAAAGAACCATATATGGTGAGGCCAAA 241 7482499 0.829855746 19 219 1605 0.902356902 1.826074803 0.215488215 0.174273859 0.32996633 241 26 3 268 2R:7482445-7482554 8 wech FBtr0300082|FBtr0300084|FBtr0300083|FBtr0300080 7478851|7481874|7480093|7481874 7483393|7483393|7483393|7483393 AAGACTGA 8mer-A1 dme-miR-14-3p 2R - 7482280 7482554 3'utr wech FlyBase G15529.1 AAGAAAATATTGATGGAACCCGCTGACTTTTCGTTGAACTTTATACAAAGACTGATTAACTAAACCGCAATTTCGGAGCCAACTAAAGAACCATATATGGTGAGGCCAAAATAAGTGAAAGAGCAACACACTCAAATTGCAATGACATTGATAACGTAAAGTAACTTAACATAGCTTAACATACATACTTTCGCGCATATAGAGCGATACAGATATCATATAGATCCGATCATCCAGTCACGAATCATCATGGGCATAGCTGAAACCGAGTTTAA 229 7482499 0.978696172 34 217 1466 0.946629213 2.226599905 0.306179775 0.366812227 0.592696629 229 18 1 337 2R:7482280-7482554 8 165.5 1001 FBgn0259745 2441.89 39.74 61.13333333 0.067775371 4.164569703 2.707197383 -8 -8 -8 0.25 dme-miR-14-3p 7mer-A1 AGACTGA 2R 7482624 7482630 - 2R_7482624_7482630_- 0.810083968 0.812435005 0.811259487 0.001662408 wech FBtr0300084|FBtr0300083|FBtr0300080|FBtr0300082 7481874|7480093|7481874|7478851 7483393|7483393|7483393|7483393 2R - 7482588 7482672 3'utr wech FlyBase G20471.1 TTTGGGACATACATATGTATTTTAATGATTTCCTTATAATTGAGACTGAGCATTTGACAACACGAACTTTGCGTGTACGGAAGCA 374 7482632 0.814231969 12 366 2667 0.980477223 2.354108439 0.106290672 0.200534759 0.351409978 374 8 1 452 2R:7482588-7482672 7 wech FBtr0300082|FBtr0300084|FBtr0300083|FBtr0300080 7478851|7481874|7480093|7481874 7483393|7483393|7483393|7483393 AGACTGA 7mer-A1 dme-miR-14-3p 2R - 7482582 7482652 3'utr wech FlyBase G15530.1 TTTAATGATTTCCTTATAATTGAGACTGAGCATTTGACAACACGAACTTTGCGTGTACGGAAGCAAAGCGA 270 7482632 0.977139938 16 257 1794 0.956632653 2.273001272 0.091836735 0.344444444 0.548469388 270 16 1 375 2R:7482582-7482652 7 308 1002 FBgn0259745 2441.89 39.74 61.13333333 0.126131808 7.750377453 5.038167939 2 2 2 0.25 dme-miR-1007-3p 6mer2-7 GAGCTT 2R 7494721 7494726 - 2R_7494721_7494726_- 0.913567212 0.892763951 0.903165581 0.014710084 CG1620 FBtr0300830 7494010 7494823 2R - 7494700 7494752 3'utr CG1620 FlyBase G20512.1 TGGAAGAAGAGTGAGCGCCGGGATCAGAGCTTTGCTTTAAACGACACCATCGA 8 7494721 0.960619817 4 8 41 1 0.903089987 0.375 0 0 8 0 0 8 2R:7494700-7494752 6 CG1620 FBtr0300830 7494010 7494823 GAGCTT 6mer2-7 dme-miR-1007-3p 2R - 7494702 7494747 3'utr CG1620 FlyBase G15563.1 GAAGAGTGAGCGCCGGGATCAGAGCTTTGCTTTAAACGACACCATC 14 7494721 0.700856862 5 14 78 1 1.361727836 0.347826087 0.5 0.695652174 14 0 0 23 2R:7494702-7494747 6 10.5 1003 FBgn0033183 539.2866667 29.41333333 45.03 0.019470164 0.356980961 0.233177881 -5 -5 -5 0.25 dme-bantam-3p 6mer3-8 TGATCT 2R 7507528 7507533 + 2R_7507528_7507533_+ 0.957201641 0.909140476 0.933171058 0.03398433 didum FBtr0089744 7505871 7508237 2R + 7507510 7507563 3'utr didum FlyBase G13547.1 GGATGTTCAGACCATTTGTGATCTGTGTACTTCTCTGAGCACGGCGCAGGTCCT 16 7507525 0.987291717 5 16 144 1 1.204119983 0.25 0 0 16 0 0 16 2R:7507510-7507563 6 didum FBtr0089744 7505871 7508237 TGATCT 6mer3-8 dme-bantam-3p 2R + 7507513 7507562 3'utr didum FlyBase G10321.1 TGTTCAGACCATTTGTGATCTGTGTACTTCTCTGAGCACGGCGCAGGTCC 7 7507533 0.981461847 3 5 42 0.888888889 0.903089987 0.111111111 0.142857143 0.333333333 7 1 0 8 2R:7507513-7507562 6 10 1004 FBgn0261397 963.6266667 18.58333333 28.54333333 0.010377463 0.538116592 0.350344505 3 -5 -1 0.25 dme-miR-34-5p 6mer3-8 CACTGC 2R 7507914 7507919 + 2R_7507914_7507919_+ 0.996603037 0.999999295 0.998301166 0.002401547 didum FBtr0089743|FBtr0089745|FBtr0089744 7507857|7507857|7505871 7508237|7508625|7508237 2R + 7507856 7507927 stop_codon didum FlyBase G13548.1 TAAACGTCGCGTGCCTGCGTCTTGCCGGTCGAGAACTTTGCCATTTTGGATGACATTACACTGCTTAGTTTT 13 7507912 0.932591288 7 12 92 0.933333333 1.146128036 0.133333333 0.153846154 0.266666667 13 1 0 14 2R:7507856-7507927 6 didum FBtr0089744|FBtr0089745|FBtr0089743 7505871|7507857|7507857 7508237|7508625|7508237 CACTGC 6mer3-8 dme-miR-34-5p 2R + 7507865 7507927 3'utr didum FlyBase G10322.1 CGTGCCTGCGTCTTGCCGGTCGAGAACTTTGCCATTTTGGATGACATTACACTGCTTAGTTTT 6 7507912 0.990134796 5 5 45 1 1.113943352 0.153846154 0.666666667 0.846153846 6 0 0 13 2R:7507865-7507927 6 5 1005 FBgn0261397 963.6266667 18.58333333 28.54333333 0.005188731 0.269058296 0.175172253 2 2 2 0.25 dme-miR-79-3p 6mer3-8 TAGCTT 2R 7508048 7508053 + 2R_7508048_7508053_+ 0.917610281 0.84973736 0.883673821 0.047993388 didum FBtr0089743|FBtr0089745|FBtr0089744 7507857|7507857|7505871 7508237|7508625|7508237 2R + 7508010 7508066 3'utr didum FlyBase G13549.1 TAGAGCCGTTTTGCCGAAATGTTTGTGTAGTTCCTGTTTAGCTTAAATACCCGTTGT 16 7508047 0.991882828 8 14 156 0.944444444 1.230448921 0.111111111 0.0625 0.166666667 16 1 0 17 2R:7508010-7508066 6 didum FBtr0089744|FBtr0089745|FBtr0089743 7505871|7507857|7507857 7508237|7508625|7508237 TAGCTT 6mer3-8 dme-miR-79-3p 2R + 7508026 7508066 3'utr didum FlyBase G10323.1 AAATGTTTGTGTAGTTCCTGTTTAGCTTAAATACCCGTTGT 16 7508047 0.728151613 6 16 178 1 1.491361694 0.032258065 0.6875 0.838709677 16 0 0 31 2R:7508026-7508066 6 15 1006 FBgn0261397 963.6266667 18.58333333 28.54333333 0.015566194 0.807174888 0.525516758 1 1 1 0.25 dme-miR-283-5p 8mer-A1 TGATATTA 2R 7580650 7580657 + 2R_7580650_7580657_+ 0.588248821 0.589972995 0.589110908 0.001219194 Vps13 FBtr0088910|FBtr0310024 7580470|7580470 7580675|7580675 2R + 7580614 7580664 3'utr Vps13 FlyBase G13600.1 ATGTCGCACTTTTACGTATGTTAACAACCATGGTTTTGATATTAAAATTTT 10 7580648 0.98854002 5 10 95 1 1 0.1 0 0 10 0 0 10 2R:7580614-7580664 8 Vps13 FBtr0310024|FBtr0088910 7580470|7580470 7580675|7580675 TGATATTA 8mer-A1 dme-miR-283-5p 2R + 7580627 7580661 3'utr Vps13 FlyBase G10359.1 ACGTATGTTAACAACCATGGTTTTGATATTAAAAT 8 7580648 0.693611658 5 8 68 1 1.278753601 0 0.75 0.894736842 8 0 0 19 2R:7580627-7580661 8 8 1007 FBgn0033194 1638.743333 18.93 29.02666667 0.00488179 0.422609614 0.275608636 2 2 2 0.25 dme-miR-190-5p 8mer-m1 ACATATCT 2R 7651658 7651665 - 2R_7651658_7651665_- 0.516804968 0.423603434 0.470204201 0.065903483 CG17985 FBtr0088946 7651623 7652111 2R - 7651640 7651700 3'utr CG17985 FlyBase G20626.1 GGGATAGTTTCTCTTACGCCAAAAAAGTACGTAATACATATCTTAGAGCTAAATAAATAGT 11 7651658 0.981616119 5 10 68 0.916666667 1.041392685 0.25 0.090909091 0.166666667 11 1 0 11 2R:7651640-7651700 8 CG17985 FBtr0088946 7651623 7652111 ACATATCT 8mer-m1 dme-miR-190-5p 2R - 7651648 7651677 3'utr CG17985 FlyBase G15651.1 AAAGTACGTAATACATATCTTAGAGCTAAA 6 7651658 0.766135231 2 5 31 1 0.954242509 0.222222222 0.333333333 0.555555556 6 0 0 9 2R:7651648-7651677 8 6.5 1008 FBgn0033199 98.75333333 8.186666667 12.54333333 0.065820563 0.793973941 0.518203561 -7 -7 -7 0.25 dme-miR-1008-3p 7mer-A1 GCTGTGA 2R 7651813 7651819 - 2R_7651813_7651819_- 0.772008082 0.751388979 0.761698531 0.014579905 CG17985 FBtr0088946 7651623 7652111 2R - 7651798 7651846 3'utr CG17985 FlyBase G20627.1 AATTGCAGGATTCTAAGATCCGATTGTGCTGTGAATATAAATCGTAACC 15 7651822 0.975540418 3 15 116 1 1.230448921 0.117647059 0.133333333 0.235294118 15 0 0 17 2R:7651798-7651846 7 CG17985 FBtr0088946 7651623 7652111 GCTGTGA 7mer-A1 dme-miR-1008-3p 2R - 7651805 7651832 3'utr CG17985 FlyBase G15652.1 AAGATCCGATTGTGCTGTGAATATAAAT 13 7651822 0.719316456 2 11 79 1 1.361727836 0.130434783 0.615384615 0.782608696 13 0 0 23 2R:7651805-7651832 7 14 1009 FBgn0033199 98.75333333 8.186666667 12.54333333 0.141767367 1.71009772 1.116130747 3 3 3 0.25 dme-miR-970-3p 6mer2-7 CTTATG 2R 7667359 7667364 - 2R_7667359_7667364_- 0.864877266 0.991634671 0.928255969 0.089631017 CG12042 FBtr0088944 7667246 7667400 2R - 7667312 7667410 stop_codon CG12042 FlyBase G20642.1 AGCCAACTAAACTGGAAACTTATTAGCCAACAGGCGTACTAATCGACTTATGCGAAATATGAAATATGCTTTATGAAAGCTAGAGAAATATGTATTTAT 23 7667368 0.970218556 10 22 126 0.965517241 1.447158031 0.034482759 0.173913043 0.344827586 23 1 0 28 2R:7667312-7667410 6 CG12042 FBtr0088944 7667246 7667400 CTTATG 6mer2-7 dme-miR-970-3p 2R - 7667327 7667386 3'utr CG12042 FlyBase G15662.1 AGCCAACAGGCGTACTAATCGACTTATGCGAAATATGAAATATGCTTTATGAAAGCTAGA 8 7667368 0.957780341 5 8 44 1 1.079181246 0.083333333 0.375 0.583333333 8 0 0 12 2R:7667327-7667386 6 9 1010 FBgn0033206 185.4566667 12.72666667 19.49666667 0.048528857 0.707176532 0.46161737 4 4 4 0.25 dme-miR-252-5p 6mer3-8 GTACTT 2R 7718684 7718689 - 2R_7718684_7718689_- 0.987271223 0.998827856 0.993049539 0.008171821 CG18812 FBtr0330328|FBtr0306239|FBtr0330327|FBtr0088935|FBtr0088937|FBtr0088936 7718444|7718444|7718277|7718444|7718277|7716805 7719261|7719261|7719237|7719261|7719261|7719261 2R - 7718661 7718783 5'utr CG18812 FlyBase G20697.1 AACGTTAGCAATGCTGAAGAAAATAAAATTTGATTAGAGACCCTGCATGTACCGGATATACACAAGATTATTCTAAATATGAAATTGATAAATTGTACTTGATACTTGATTACTGAAGGGAGA 33 7718690 0.97787248 10 33 221 1 1.556302501 0.194444444 0.060606061 0.138888889 33 0 0 36 2R:7718661-7718783 6 CG18812 FBtr0306239|FBtr0330328|FBtr0088936|FBtr0088937|FBtr0088935|FBtr0330327 7718444|7718444|7716805|7718277|7718444|7718277 7719261|7719261|7719261|7719261|7719261|7719237 GTACTT 6mer3-8 dme-miR-252-5p 2R - 7718583 7718698 5'utr CG18812 FlyBase G15697.1 TGATAAATTGTACTTGATACTTGATTACTGAAGGGAGACAGACGTATATATGAATAAGTATACATATTGTTAGTTATCTTTGCAATTACAAATTGTATTATTAATGTATTAATACT 13 7718690 0.987002199 8 13 120 1 1.322219295 0.142857143 0.461538462 0.666666667 13 0 0 21 2R:7718583-7718698 6 12 1011 FBgn0042135 915.0533333 42.71666667 65.20333333 0.01311399 0.280920796 0.184039671 1 1 1 0.25 dme-miR-999-3p 6mer3-8 AGTTAA 2R 7787887 7787892 + 2R_7787887_7787892_+ 0.999999981 0.997100716 0.998550348 0.002050115 CanB2 FBtr0088930|FBtr0309866 7787760|7787760 7788135|7789053 2R + 7787792 7787921 3'utr CanB2 FlyBase G13646.1 GATGTTATTTATTTATTTTATACACGTCGGCATCCTTCGATTGTCACTATCACCACTATTCATATGGTTATTATTTTTGATCGGCGATTCTCTATAGTTAAATATTGTTATGAGCCTTTGGCGAGCCAGT 30 7787908 0.994383499 17 19 255 0.666666667 1.079181246 0.194444444 0.133333333 0.277777778 30 11 1 24 2R:7787792-7787921 6 CanB2 FBtr0309866 7787760 7789053 AGTTAA 6mer3-8 dme-miR-999-3p 2R + 7787836 7787925 3'utr CanB2 FlyBase G10396.2 CACTATCACCACTATTCATATGGTTATTATTTTTGATCGGCGATTCTCTATAGTTAAATATTGTTATGAGCCTTTGGCGAGCCAGTTCAG 20 7787885 0.994248481 7 9 104 0.482758621 0.669006781 0.24137931 0.4 0.586206897 20 13 2 14 2R:7787836-7787925 6 5.5 1012 FBgn0015614 671.95 42.17666667 64.64333333 0.008185133 0.130403857 0.085082246 -21 2 -9.5 0.25 dme-miR-308-3p 8mer-m1 CTGTGATT 2R 7788280 7788287 + 2R_7788280_7788287_+ 0.38532616 0.384724888 0.385025524 0.000425183 CanB2 FBtr0309866 7787760 7789053 2R + 7788233 7788308 3'utr CanB2 FlyBase G13648.1 CGAATGCACTTTCGCTCTATCATATTGATGTTATATTTCTAATTCTCCTGTGATTTTGCCAAAAACAAAACAAAAA 82 7788287 0.989321651 11 79 759 0.970588235 1.694605199 0.137254902 0.219512195 0.37254902 82 2 1 99 2R:7788233-7788308 8 CanB2 FBtr0309866 7787760 7789053 CTGTGATT 8mer-m1 dme-miR-308-3p 2R + 7788231 7788312 3'utr CanB2 FlyBase G10397.1 ATCGAATGCACTTTCGCTCTATCATATTGATGTTATATTTCTAATTCTCCTGTGATTTTGCCAAAAACAAAACAAAAAAAAA 72 7788287 0.989852015 11 70 690 0.97029703 1.991226076 0.148514851 0.333333333 0.524752475 72 3 0 98 2R:7788231-7788312 8 72.5 1013 FBgn0015614 671.95 42.17666667 64.64333333 0.107894933 1.71895993 1.1215387 -7 -7 -7 0.25 dme-miR-33-5p 7mer-m8 CAATGCA 2R 7800854 7800860 - 2R_7800854_7800860_- 0.473541274 0.669063464 0.571302369 0.138255073 Nop17l FBtr0088901|FBtr0088902|FBtr0088900 7800783|7800783|7800783 7801442|7801442|7801442 2R - 7800789 7800883 3'utr Nop17l FlyBase G20758.1 ATGTTTAGAAGCACTGGCTGAATCAATGCATGTAATTTTAACTTTTATAAGCGAGCTGCAAGTTAAAATACATATACATCTCTTATGAATGAGAA 115 7800861 0.986669353 11 112 968 0.946564885 1.792391689 0.198473282 0.113043478 0.221374046 115 6 1 124 2R:7800789-7800883 7 Nop17l FBtr0088902|FBtr0088900|FBtr0088901 7800783|7800783|7800783 7801442|7801442|7801442 CAATGCA 7mer-m8 dme-miR-33-5p 2R - 7800838 7800893 3'utr Nop17l FlyBase G15746.1 AGCTACGTACATGTTTAGAAGCACTGGCTGAATCAATGCATGTAATTTTAACTTTT 66 7800861 0.745426149 10 65 448 0.990291262 2.008600172 0.213592233 0.439393939 0.640776699 66 1 0 102 2R:7800838-7800893 7 84 1014 FBgn0033224 692.0466667 23.42333333 35.88666667 0.121379098 3.586167639 2.340702211 1 1 1 0.25 dme-miR-8-3p 7mer-A1 AGTATTA 2R 7800931 7800937 - 2R_7800931_7800937_- 0.820623869 0.784399515 0.802511692 0.025614519 Nop17l FBtr0088901|FBtr0088902|FBtr0088900 7800783|7800783|7800783 7801442|7801442|7801442 2R - 7800903 7801011 3'utr Nop17l FlyBase G20759.1 TGGCTCCATGCTCAGCTCATATAACAATCATAACACGATAAACCTAAACAATATCAATAGTTAACAATTCCTCTAGTATTACACACAACAAAATCACCCAATGCATAAG 26 7800937 0.974049211 13 23 153 0.911764706 1.190331698 0.029411765 0.192307692 0.382352941 26 2 1 31 2R:7800903-7801011 7 Nop17l FBtr0088902|FBtr0088900|FBtr0088901 7800783|7800783|7800783 7801442|7801442|7801442 AGTATTA 7mer-A1 dme-miR-8-3p 2R - 7800898 7800955 3'utr Nop17l FlyBase G15747.1 ATAGTTAACAATTCCTCTAGTATTACACACAACAAAATCACCCAATGCATAAGTAGAG 9 7800938 0.757729228 4 7 45 0.714285714 0.698970004 0 0.444444444 0.642857143 9 3 1 10 2R:7800898-7800955 7 9.5 1015 FBgn0033224 692.0466667 23.42333333 35.88666667 0.013727398 0.405578483 0.264722274 0 1 0.5 0.25 dme-miR-965-3p 6mer3-8 TACGCT 2R 7801142 7801147 - 2R_7801142_7801147_- 0.999284227 0.990171819 0.994728023 0.00644344 Nop17l FBtr0088901|FBtr0088902|FBtr0088900 7800783|7800783|7800783 7801442|7801442|7801442 2R - 7801127 7801159 3'utr Nop17l FlyBase G20761.1 AAGATGAAATCCTACGCTGAACTGAAAAAGAAA 14 7801144 0.871131382 4 12 45 0.8125 1.113943352 0.3125 0.142857143 0.25 14 3 0 13 2R:7801127-7801159 6 Nop17l FBtr0088902|FBtr0088900|FBtr0088901 7800783|7800783|7800783 7801442|7801442|7801442 TACGCT 6mer3-8 dme-miR-965-3p 2R - 7801111 7801155 3'utr Nop17l FlyBase G15748.2 TGAAATCCTACGCTGAACTGAAAAAGAAACCTATTATTATAGATC 11 7801146 0.724848605 4 9 50 0.823529412 0.84509804 0.294117647 0.454545455 0.647058824 11 2 1 14 2R:7801111-7801155 6 12 1016 FBgn0033224 692.0466667 23.42333333 35.88666667 0.017339871 0.512309663 0.33438603 -3 -1 -2 0.25 dme-miR-305-5p 7mer-A1 GTACAAA 2R 7810003 7810009 + 2R_7810003_7810009_+ 0.782707573 0.781579127 0.78214335 0.00079797 sax FBtr0308825|FBtr0088832|FBtr0088833 7809418|7809418|7809418 7810067|7810067|7810067 2R + 7809790 7810065 3'utr sax FlyBase G13674.1 ATTGTTCATCAAGTGCCATTTGCAATTGAGAATTGTAAACGCCTTAACTTTAAGCTCACTCTTTGAACTTTACACTAAATTCATAACTCTAGAACTTGTCCATGCTATGATAAAACCATAAGCCACACCACCAACTGACTTGCTATCTTAGTTAGTTAAGCCTTTAGGACTTAGATACCCACGCATAGAAGCATACACACCTACTTGTATATTGTACAAATGGCAAGCTATTTAAGTTTTGTATAGTCTAAACGAAATGAAATACACGAATAGGCA 152 7810000 0.94802794 36 146 1070 0.974747475 2.285557309 0.126262626 0.263157895 0.434343434 152 5 0 193 2R:7809790-7810065 7 sax FBtr0088833|FBtr0308825|FBtr0088832 7809418|7809418|7809418 7810067|7810067|7810067 GTACAAA 7mer-A1 dme-miR-305-5p 2R + 7809783 7810060 3'utr sax FlyBase G10411.1 ATTATTCATTGTTCATCAAGTGCCATTTGCAATTGAGAATTGTAAACGCCTTAACTTTAAGCTCACTCTTTGAACTTTACACTAAATTCATAACTCTAGAACTTGTCCATGCTATGATAAAACCATAAGCCACACCACCAACTGACTTGCTATCTTAGTTAGTTAAGCCTTTAGGACTTAGATACCCACGCATAGAAGCATACACACCTACTTGTATATTGTACAAATGGCAAGCTATTTAAGTTTTGTATAGTCTAAACGAAATGAAATACACGAAT 104 7810001 0.982192411 26 96 712 0.891156463 1.640150041 0.081632653 0.288461538 0.496598639 104 14 2 131 2R:7809783-7810060 7 63 1017 FBgn0003317 608.98 30.24 46.27666667 0.103451673 2.083333333 1.361377224 3 2 2.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 7915134 7915140 - 2R_7915134_7915140_- 0.410681548 0.384705948 0.397693748 0.018367523 CG12159 FBtr0088889|FBtr0088889|FBtr0088889 7915025|7915025|7915025 7915167|7915167|7915167 2R - 7915045 7915158 3'utr CG12159 FlyBase G20817.1 AAGGAAAACAAAACCACTTGTGATAACGATTACGATGATATGTATGCAAGGCATTAAAAATCTCATAAATACCAATGCTTTCAAATCGCCTCTGCGTCGATGTTCCATATAAAT 60 7915141 0.963796414 14 56 290 0.950617284 1.40936947 0.135802469 0.266666667 0.456790123 60 2 2 77 2R:7915045-7915158 7 CG12159 FBtr0088889|FBtr0088889|FBtr0088889 7915025|7915025|7915025 7915167|7915167|7915167 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 7915083 7915159 3'utr CG12159 FlyBase G15799.1 AAAGGAAAACAAAACCACTTGTGATAACGATTACGATGATATGTATGCAAGGCATTAAAAATCTCATAAATACCAAT 33 7915141 0.937503461 7 33 130 1 1.633468456 0.046511628 0.303030303 0.465116279 33 0 0 43 2R:7915083-7915159 7 34 1018 FBgn0033232 247.6666667 34.99333333 53.14 0.137281292 0.971613641 0.639819345 1 1 1 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 2R 7942171 7942177 - 2R_7942171_7942177_- 0.521089755 0.521203475 0.521146615 8.04E-05 CG14764 FBtr0088880|FBtr0339128 7942041|7942041 7942634|7942634 2R - 7942153 7942203 3'utr CG14764 FlyBase G20843.1 ATAAAAACATCAAATGGCATACATTTTGTGATTGTATTTTATAGTTACTCA 160 7942179 0.672975227 9 152 1942 0.949748744 1.674401813 0.125628141 0.1875 0.346733668 160 7 3 189 2R:7942153-7942203 7 CG14764 FBtr0339128|FBtr0088880 7942041|7942041 7942634|7942634 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 7942121 7942201 3'utr CG14764 FlyBase G15816.1 AAAAACATCAAATGGCATACATTTTGTGATTGTATTTTATAGTTACTCACGCGTAGACAAACATATACAGTATATAAATAT 124 7942179 0.865553592 13 117 1413 0.946808511 1.551449998 0.14893617 0.362903226 0.579787234 124 6 4 178 2R:7942121-7942201 7 138 1019 FBgn0033236 872.35 39.06666667 59.99333333 0.158193386 3.532423208 2.300255584 2 2 2 0.25 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 7966475 7966480 + 2R_7966475_7966480_+ 0.517967486 0.988886686 0.753427086 0.33299016 nito FBtr0088857 7965281 7966686 2R + 7966448 7966496 3'utr nito FlyBase G13749.1 AATCCGAGCAGTTCACCCAGTGCATGTGCTGTGTATGCGTGTGTTCGCA 9 7966472 0.918889718 2 9 81 1 1 0.2 0.111111111 0.2 9 0 0 10 2R:7966448-7966496 6 nito FBtr0088857 7965281 7966686 GCTGTG 6mer2-7 dme-miR-1008-3p 2R + 7966453 7966493 3'utr nito FlyBase G10468.1 GAGCAGTTCACCCAGTGCATGTGCTGTGTATGCGTGTGTTC 4 7966473 0.984592317 3 4 35 1 0.84509804 0 0.5 0.714285714 4 0 0 7 2R:7966453-7966493 6 6.5 1020 FBgn0027548 736.9233333 25.16 38.30666667 0.008820456 0.258346582 0.169683258 3 2 2.5 0.25 dme-miR-282-5p 6mer3-8 AGAGGC 2R 7969139 7969144 - 2R_7969139_7969144_- 0.997429659 0.998733241 0.99808145 0.000921714 CG8726 FBtr0088874|FBtr0088873|FBtr0301231 7968127|7968127|7968127 7969258|7969258|7969823 2R - 7969131 7969172 3'utr CG8726 FlyBase G20867.1 ACTAATCGAATTCCAAAAGCTACATTTTAGAGGCATATTAAG 7 7969162 0.815869123 4 6 42 0.909090909 1 0 0.571428571 0.727272727 7 1 0 10 2R:7969131-7969172 6 CG8726 FBtr0301231|FBtr0088874|FBtr0088873 7968127|7968127|7968127 7969823|7969258|7969258 AGAGGC 6mer3-8 dme-miR-282-5p 2R - 7969081 7969179 3'utr CG8726 FlyBase G15833.1 AACTTGAACTAATCGAATTCCAAAAGCTACATTTTAGAGGCATATTAAGAAACAGAATACTAGCAGATCGAAGACACCGCTGAGCATAGAATAGTCCCA 9 7969162 0.970068225 6 9 49 1 1.113943352 0 0.444444444 0.615384615 9 0 0 13 2R:7969081-7969179 6 3.5 1021 FBgn0033244 852.3333333 30.71666667 47.01 0.004106375 0.113944655 0.074452244 18 18 18 0.25 dme-miR-276a-3p 6mer2-7 GTTCCT 2R 8075716 8075721 + 2R_8075716_8075721_+ 0.988008582 0.966848321 0.977428451 0.014962592 lig FBtr0330630 8075416 8078815 2R + 8075698 8075762 3'utr lig FlyBase G13790.1 AGTGCGCCCATGCTAAATGTTCCTTACGCCTACTTCTATGGTGGCAATGTAATGCCCGGTAGTTT 41 8075715 0.824223447 7 38 279 0.936170213 1.342422681 0.106382979 0.175 0.29787234 40 2 1 44 2R:8075698-8075762 6 lig FBtr0330630 8075416 8078815 GTTCCT 6mer2-7 dme-miR-276a-3p 2R + 8075698 8075763 3'utr lig FlyBase G10492.1 AGTGCGCCCATGCTAAATGTTCCTTACGCCTACTTCTATGGTGGCAATGTAATGCCCGGTAGTTTT 31 8075715 0.898343073 5 29 198 0.976190476 1.311753861 0.095238095 0.3 0.5 30 0 1 41 2R:8075698-8075763 6 30 1022 FBgn0020279 5206.013333 127.7666667 197.3133333 0.005762567 0.234803026 0.152042437 1 1 1 0.25 dme-miR-14-3p 6mer2-7 AGACTG 2R 8076017 8076022 + 2R_8076017_8076022_+ 0.994297826 0.998136959 0.996217392 0.002714724 lig FBtr0330630 8075416 8078815 2R + 8075975 8076079 3'utr lig FlyBase G13792.1 AGGGCGGCTACTCGTCGAGCGTGAATCAGCAGAGCAAAACTCAGACTGTGTCCAACCAGTCGCAGGCAGGCACTGGATCCGATCTGACCTCTTCTATGTACGGAA 40 8076015 0.934436514 10 39 153 0.962264151 1.707570176 0.150943396 0.3 0.471698113 40 2 0 51 2R:8075975-8076079 6 lig FBtr0330630 8075416 8078815 AGACTG 6mer2-7 dme-miR-14-3p 2R + 8075976 8076037 3'utr lig FlyBase G10493.1 GGGCGGCTACTCGTCGAGCGTGAATCAGCAGAGCAAAACTCAGACTGTGTCCAACCAGTCGC 16 8076015 0.930839993 4 15 55 0.892857143 0.795880017 0.142857143 0.4375 0.678571429 16 0 3 25 2R:8075976-8076037 6 22.5 1023 FBgn0020279 5206.013333 127.7666667 197.3133333 0.004321925 0.17610227 0.114031828 2 2 2 0.25 dme-miR-308-3p 8mer-m1 CTGTGATT 2R 8076777 8076784 + 2R_8076777_8076784_+ 0.320811841 0.304038066 0.312424953 0.011860797 lig FBtr0100575 8076675 8077042 2R + 8076764 8076800 3'utr lig FlyBase G13795.1 GTACACTTGTTGACTGTGATTACATATAGGTTTATGT 16 8076774 0.69163216 4 16 153 1 1.278753601 0.052631579 0.1875 0.315789474 16 0 0 19 2R:8076764-8076800 8 lig FBtr0100575 8076675 8077042 CTGTGATT 8mer-m1 dme-miR-308-3p 2R + 8076763 8076804 3'utr lig FlyBase G10497.1 TGTACACTTGTTGACTGTGATTACATATAGGTTTATGTCCTT 19 8076773 0.670633392 7 18 185 0.9375 1.477121255 0.03125 0.421052632 0.65625 19 2 0 30 2R:8076763-8076804 8 17.5 1024 FBgn0020279 5206.013333 127.7666667 197.3133333 0.003361497 0.136968432 0.088691421 3 4 3.5 0.25 dme-miR-13b-2-5p 8mer-m1 TTTGACGC 2R 8079035 8079042 - 2R_8079035_8079042_- 0.563947536 0.466213014 0.515080275 0.069108728 Vps28 FBtr0310370 8078867 8079317 2R - 8079028 8079081 3'utr Vps28 FlyBase G20923.1 CTAATAAAAGGTGCATCTTCAATCTTCATGGATCAGTATTTTGACGCATATAGG 13 8079041 0.939967458 6 11 106 0.882352941 0.875061263 0 0.307692308 0.470588235 13 1 1 15 2R:8079028-8079081 8 Vps28 FBtr0310370 8078867 8079317 TTTGACGC 8mer-m1 dme-miR-13b-2-5p 2R - 8079032 8079070 3'utr Vps28 FlyBase G15871.1 TGCATCTTCAATCTTCATGGATCAGTATTTTGACGCATA 10 8079049 0.956123103 6 9 71 0.866666667 0.636822098 0.133333333 0.4 0.6 10 0 2 13 2R:8079032-8079070 8 9 1025 FBgn0021814 287.86 39.29666667 59.69 0.031265198 0.229027059 0.150779025 -1 7 3 0.25 dme-miR-283-5p 7mer-A1 GATATTA 2R 8079259 8079265 - 2R_8079259_8079265_- 0.466344016 0.599770136 0.533057076 0.0943465 Vps28 FBtr0310370 8078867 8079317 2R - 8079220 8079338 stop_codon Vps28 FlyBase G20924.1 AAGCTGCTGCACAGCCAGTAGCTATCAGTTTCTCATTGTTTACGTGTATCCCTAAATTTATATAGCATGTTCCGATATTAAACAAGTTTGATATATCACCTTACTTTTAGCGCAGACTA 31 8079271 0.989249939 10 28 273 0.923076923 1.255272505 0.076923077 0.258064516 0.41025641 31 2 1 36 2R:8079220-8079338 7 Vps28 FBtr0310370 8078867 8079317 GATATTA 7mer-A1 dme-miR-283-5p 2R - 8079245 8079325 stop_codon Vps28 FlyBase G15872.1 GCCAGTAGCTATCAGTTTCTCATTGTTTACGTGTATCCCTAAATTTATATAGCATGTTCCGATATTAAACAAGTTTGATAT 20 8079271 0.988412363 8 19 185 0.967741935 1.477121255 0.064516129 0.35 0.580645161 20 1 0 30 2R:8079245-8079325 7 16.5 1026 FBgn0021814 287.86 39.29666667 59.69 0.05731953 0.419882942 0.276428212 6 6 6 0.25 dme-miR-305-5p 7mer-A1 GTACAAA 2R 8086793 8086799 + 2R_8086793_8086799_+ 0.742296005 0.772810386 0.757553196 0.021576939 sut1 FBtr0088777 8086579 8087151 2R + 8086770 8086806 3'utr sut1 FlyBase G13808.2 CCGCCTAGCCTGTAAGTTCTTTTGTACAAACCAATAA 9 8086791 0.68849166 2 8 69 1 1.113943352 0 0.222222222 0.461538462 9 0 0 13 2R:8086770-8086806 7 sut1 FBtr0088777 8086579 8087151 GTACAAA 7mer-A1 dme-miR-305-5p 2R + 8086772 8086805 3'utr sut1 FlyBase G10511.1 GCCTAGCCTGTAAGTTCTTTTGTACAAACCAATA 8 8086791 0.97754337 2 8 59 1 1.041392685 0 0.375 0.545454545 8 0 0 11 2R:8086772-8086805 7 8 1027 FBgn0028563 340.6433333 17.19333333 26.42666667 0.023484975 0.465296627 0.302724521 2 2 2 0.25 dme-miR-980-3p 7mer-m8 GGCAGCT 2R 8101980 8101986 + 2R_8101980_8101986_+ 0.65547254 0.652789585 0.654131062 0.001897097 CG11210 FBtr0088781 8101903 8102306 2R + 8101947 8102058 3'utr CG11210 FlyBase G13825.1 TATCTACAAAAGCCACTAAGAACTTTTCAAGTTGGCAGCTTTGATTTGCATACGAAAGAATGACAGGAGGATAACAGCAAGGCAATTTGTGATACCTAAACCAGCCTCAATG 601 8101978 0.981650021 17 576 5224 0.959654179 1.64738297 0.103746398 0.141430948 0.25648415 601 14 14 666 2R:8101947-8102058 7 CG11210 FBtr0088781 8101903 8102306 GGCAGCT 7mer-m8 dme-miR-980-3p 2R + 8101952 8102056 3'utr CG11210 FlyBase G10524.1 ACAAAAGCCACTAAGAACTTTTCAAGTTGGCAGCTTTGATTTGCATACGAAAGAATGACAGGAGGATAACAGCAAGGCAATTTGTGATACCTAAACCAGCCTCAA 421 8101978 0.895021184 17 401 3635 0.958333333 1.562642679 0.106481481 0.363420428 0.586419753 421 11 16 621 2R:8101952-8102056 7 434.5 1028 FBgn0033259 595.3333333 24.97666667 38.03333333 0.729843225 17.39623649 11.42418931 2 2 2 0.25 dme-bantam-3p 6mer3-8 TGATCT 2R 8102109 8102114 + 2R_8102109_8102114_+ 0.999890265 0.922224366 0.961057315 0.054918085 CG11210 FBtr0088781 8101903 8102306 2R + 8102077 8102129 3'utr CG11210 FlyBase G13826.1 CTGCACGCGAAAGCGATAGCAATATTTATTTCTGATCTGTATATAATCTACCT 21 8102102 0.991404109 9 19 208 0.956521739 1.041392685 0.086956522 0.095238095 0.173913043 21 0 1 22 2R:8102077-8102129 6 CG11210 FBtr0088781 8101903 8102306 TGATCT 6mer3-8 dme-bantam-3p 2R + 8102065 8102145 3'utr CG11210 FlyBase G10525.1 TTAATATGACCCCTGCACGCGAAAGCGATAGCAATATTTATTTCTGATCTGTATATAATCTACCTAATTTCCCAATTTTAT 17 8102102 0.993665925 8 15 179 0.88 1.342422681 0 0.411764706 0.6 17 3 0 22 2R:8102065-8102145 6 16.5 1029 FBgn0033259 595.3333333 24.97666667 38.03333333 0.027715566 0.660616575 0.433829974 7 7 7 0.25 dme-miR-8-3p 7mer-m8 CAGTATT 2R 8114400 8114406 - 2R_8114400_8114406_- 0.514280232 0.628377751 0.571328991 0.080679187 Asap FBtr0300954|FBtr0339300 8114284|8114284 8115265|8115265 2R - 8114315 8114423 3'utr Asap FlyBase G20953.1 ATTTTGTATACACGTTTCAGTATTTATTTAGCAAAACCTTAAAGCATATTGATATTATATGTAAGTCAAATAAACGGAAGAACATAACGCTTATTACATATATACACAT 93 8114377 0.835306613 14 86 843 0.93 1.667452953 0.14 0.064516129 0.13 93 6 1 93 2R:8114315-8114423 7 Asap FBtr0339300|FBtr0300954 8114284|8114284 8115265|8115265 CAGTATT 7mer-m8 dme-miR-8-3p 2R - 8114317 8114427 3'utr Asap FlyBase G15890.1 ACTCATTTTGTATACACGTTTCAGTATTTATTTAGCAAAACCTTAAAGCATATTGATATTATATGTAAGTCAAATAAACGGAAGAACATAACGCTTATTACATATATACAC 46 8114408 0.799174248 12 43 420 0.953846154 1.491361694 0.076923077 0.304347826 0.507692308 46 2 1 62 2R:8114317-8114427 7 24 1030 FBgn0050372 698.41 18.11666667 27.74 0.034363769 1.32474701 0.86517664 -29 2 -13.5 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2R 8114589 8114594 - 2R_8114589_8114594_- 0.879006388 0.880499028 0.879752708 0.001055428 Asap FBtr0300954|FBtr0339300 8114284|8114284 8115265|8115265 2R - 8114567 8114617 3'utr Asap FlyBase G20956.1 AAAAAGAAGAGCAAAAGCCCTTTGTACCTAGAAGTTGTTACCAATTAAGTA 59 8114595 0.968369066 3 59 328 1 1.826074803 0.089552239 0.118644068 0.223880597 59 0 0 67 2R:8114567-8114617 6 Asap FBtr0339300|FBtr0300954 8114284|8114284 8115265|8115265 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2R - 8114568 8114614 3'utr Asap FlyBase G15891.1 AAGAAGAGCAAAAGCCCTTTGTACCTAGAAGTTGTTACCAATTAAGT 40 8114595 0.974265662 3 38 236 0.925925926 1.698970004 0.037037037 0.275 0.462962963 40 4 0 50 2R:8114568-8114614 6 49.5 1031 FBgn0050372 698.41 18.11666667 27.74 0.070875274 2.732290708 1.78442682 1 1 1 0.25 dme-miR-277-3p 7mer-m8 TGCATTT 2R 8114992 8114998 - 2R_8114992_8114998_- 0.441633022 0.402183968 0.421908495 0.027894655 Asap FBtr0300954|FBtr0339300 8114284|8114284 8115265|8115265 2R - 8114908 8115028 3'utr Asap FlyBase G20959.1 AATCAAAGCCTTTAAGTAGCGATCTTGCTGTGCATTTCCCGTTGGCTTCCTTCATAAGGTTAGCGCTTTAATAACTGAATATGTCCTGCAAATGCTGTAATTCGTACCATAACTAGATCTA 84 8115003 0.878334542 17 81 670 0.95959596 1.977723605 0.090909091 0.154761905 0.282828283 84 4 0 95 2R:8114908-8115028 7 Asap FBtr0339300|FBtr0300954 8114284|8114284 8115265|8115265 TGCATTT 7mer-m8 dme-miR-277-3p 2R - 8114838 8115076 3'utr Asap FlyBase G15892.1 AAGTTACTCTTAGCTTAGAAGCCAACTACTCATTTACACTTGTATTTCAATCAAAGCCTTTAAGTAGCGATCTTGCTGTGCATTTCCCGTTGGCTTCCTTCATAAGGTTAGCGCTTTAATAACTGAATATGTCCTGCAAATGCTGTAATTCGTACCATAACTAGATCTAACTTTAACTTAGCCTAAAACGCTGTGCGCAAAAGTTACTCAATGTCAGAAGAATTGTCGGGAGATAAGCT 82 8115004 0.892757701 29 78 627 0.944 1.594760753 0.112 0.353658537 0.576 82 5 2 118 2R:8114838-8115076 7 39 1032 FBgn0050372 698.41 18.11666667 27.74 0.055841125 2.152713891 1.40591204 5 6 5.5 0.25 dme-miR-980-3p 7mer-m8 GGCAGCT 2R 8129313 8129319 + 2R_8129313_8129319_+ 0.618929411 0.596298448 0.607613929 0.016002534 Socs44A FBtr0088784 8128794 8129476 2R + 8129254 8129335 3'utr Socs44A FlyBase G13846.3 ATTTTTGTATTCCTAACTTGGACACTAACTTTTTGCTAATCTAGATTGCATGGAATTTAGGCAGCTTTACGGCAATCGAATA 90 8129320 0.760770134 13 84 578 0.964912281 1.740362689 0.175438596 0.211111111 0.377192982 90 3 1 110 2R:8129254-8129335 7 Socs44A FBtr0088784 8128794 8129476 GGCAGCT 7mer-m8 dme-miR-980-3p 2R + 8129293 8129378 3'utr Socs44A FlyBase G10542.1 TCTAGATTGCATGGAATTTAGGCAGCTTTACGGCAATCGAATACGTTCAATGCCAATTACTCTTGTTGCAACGTGTATGTATTTTA 74 8129320 0.778587119 12 71 510 0.963636364 2.025305865 0.236363636 0.405405405 0.6 74 4 0 106 2R:8129293-8129378 7 71 1033 FBgn0033266 360.15 23.80333333 36.32666667 0.197140081 2.982775522 1.954487062 -7 -7 -7 0.25 dme-miR-2a-2-5p 8mer-m1 TGATGAGG 2R 8137079 8137086 - 2R_8137079_8137086_- 0.453787055 0.475000271 0.464393663 0.014999998 Lpin FBtr0303583|FBtr0303573|FBtr0303584|FBtr0113055 8136984|8136984|8136984|8136984 8137486|8137486|8137486|8137486 2R - 8137019 8137157 3'utr Lpin FlyBase G20993.1 AGACGGCGCATAGGAGTTGTGATTTTGATTTCATTATTTTTCGTATGTGATCATTTAAATTAAGTTAATTGTGATGAGGTTTTTATTTGAAGTTTTTATGAAAACTGTGCTCTAAACCTATGTATACTTAACTGATAGT 283 8137090 0.822479914 30 253 2521 0.91954023 1.359021943 0.227011494 0.173144876 0.327586207 283 15 13 320 2R:8137019-8137157 8 Lpin FBtr0303573|FBtr0113055|FBtr0303583|FBtr0303584 8136984|8136984|8136984|8136984 8137486|8137486|8137486|8137486 TGATGAGG 8mer-m1 dme-miR-2a-2-5p 2R - 8136985 8137157 3'utr Lpin FlyBase G15918.1 AGACGGCGCATAGGAGTTGTGATTTTGATTTCATTATTTTTCGTATGTGATCATTTAAATTAAGTTAATTGTGATGAGGTTTTTATTTGAAGTTTTTATGAAAACTGTGCTCTAAACCTATGTATACTTAACTGATAGTGTTTCAATACCAATAAATGCTTCAAATTCAAACA 189 8137090 0.98958929 31 169 1771 0.876865672 1.416825353 0.23880597 0.285714286 0.496268657 189 25 8 235 2R:8136985-8137157 8 60 1034 FBgn0263593 1170.44 33.67 51.33333333 0.051262773 1.782001782 1.168831169 4 4 4 0.25 dme-miR-305-3p 8mer-A1 ATGTGCCA 2R 8138124 8138131 - 2R_8138124_8138131_- 0.564887944 0.390122808 0.477505376 0.123577587 Lpin FBtr0303577|FBtr0303585|FBtr0303575|FBtr0303578|FBtr0088815|FBtr0303574 8137986|8137986|8137986|8137986|8137986|8137986 8138234|8138234|8138234|8138234|8138234|8138234 2R - 8138109 8138172 3'utr Lpin FlyBase G20999.1 AAGAGAGTTAGGATTGTGCTATACCTGTATGTCTGTGCCTGATGTGCCAGGTCAGCGAGCTCCA 46 8138139 0.699495751 6 44 356 0.962264151 1.707570176 0.245283019 0.130434783 0.245283019 46 2 0 51 2R:8138109-8138172 8 Lpin FBtr0303578|FBtr0303575|FBtr0088815|FBtr0303574|FBtr0303577|FBtr0303585 8137986|8137986|8137986|8137986|8137986|8137986 8138234|8138234|8138234|8138234|8138234|8138234 ATGTGCCA 8mer-A1 dme-miR-305-3p 2R - 8138109 8138174 3'utr Lpin FlyBase G15922.1 TTAAGAGAGTTAGGATTGTGCTATACCTGTATGTCTGTGCCTGATGTGCCAGGTCAGCGAGCTCCA 29 8138139 0.709045539 8 28 221 0.97826087 1.653212514 0.173913043 0.379310345 0.608695652 29 1 0 45 2R:8138109-8138174 8 29 1035 FBgn0263593 1170.44 33.67 51.33333333 0.024777007 0.861300861 0.564935065 8 8 8 0.25 dme-miR-980-3p 6mer2-7 GCAGCT 2R 8138195 8138200 - 2R_8138195_8138200_- 0.917004021 0.986442298 0.95172316 0.049100293 Lpin FBtr0303577|FBtr0303585|FBtr0303575|FBtr0303578|FBtr0088815|FBtr0303574 8137986|8137986|8137986|8137986|8137986|8137986 8138234|8138234|8138234|8138234|8138234|8138234 2R - 8138189 8138220 3'utr Lpin FlyBase G21000.1 TAGCCCCAGTCGAAGGTTGTGCAGCTTGCAAA 5 8138203 0.718894525 3 5 21 1 0.698970004 0.2 0 0 5 0 0 5 2R:8138189-8138220 6 Lpin FBtr0303578|FBtr0303575|FBtr0088815|FBtr0303574|FBtr0303577|FBtr0303585 8137986|8137986|8137986|8137986|8137986|8137986 8138234|8138234|8138234|8138234|8138234|8138234 GCAGCT 6mer2-7 dme-miR-980-3p 2R - 8138188 8138225 3'utr Lpin FlyBase G15923.1 AGTCCTAGCCCCAGTCGAAGGTTGTGCAGCTTGCAAAT 11 8138194 0.956972445 4 11 55 1 1.113943352 0.076923077 0.181818182 0.307692308 11 0 0 13 2R:8138188-8138225 6 7.5 1036 FBgn0263593 1170.44 33.67 51.33333333 0.006407847 0.222750223 0.146103896 3 -6 -1.5 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 8225969 8225976 + 2R_8225969_8225976_+ 0.606775455 0.555258177 0.581016816 0.036428232 LRP1 FBtr0344893|FBtr0344894 8225414|8225414 8226438|8226438 2R + 8225850 8225998 3'utr LRP1 FlyBase G13939.1 ATTGCCCAAAAGCAGCCTAGTTAACATTTAAACGGAGGAATCATTCGAGCACTCACTAACAATTTGCCAATTAGTGAATGCGGGCGAAATCGAAATCGCCTCTTGAGATTGACCAAATATGCATTTAAATTAATTAAGTATTCACAAAG 70 8225953 0.774345923 19 69 441 0.987654321 1.903089987 0.086419753 0.157142857 0.271604938 70 1 0 80 2R:8225850-8225998 8 LRP1 FBtr0344893|FBtr0344894 8225414|8225414 8226438|8226438 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 8225850 8225990 3'utr LRP1 FlyBase G10604.1 ATTGCCCAAAAGCAGCCTAGTTAACATTTAAACGGAGGAATCATTCGAGCACTCACTAACAATTTGCCAATTAGTGAATGCGGGCGAAATCGAAATCGCCTCTTGAGATTGACCAAATATGCATTTAAATTAATTAAGTAT 47 8225953 0.909663925 14 45 257 0.958333333 1.838849091 0 0.446808511 0.638888889 47 3 0 69 2R:8225850-8225990 8 20 1037 FBgn0053087 1624.95 12.3 18.76333333 0.012308071 1.62601626 1.065908687 16 16 16 0.25 dme-miR-8-3p 7mer-m8 CAGTATT 2R 8239941 8239947 + 2R_8239941_8239947_+ 0.639062855 0.639471813 0.639267334 0.000289136 pnut FBtr0088793|FBtr0088792 8239675|8239675 8240297|8240297 2R + 8239918 8239961 3'utr pnut FlyBase G13949.1 GTACATATAACACATAGCAGTTGCAGTATTTTACCAATATATAT 38 8239938 0.820954135 4 38 304 1 1.62324929 0 0.105263158 0.19047619 38 0 0 42 2R:8239918-8239961 7 pnut FBtr0088793|FBtr0088792 8239675|8239675 8240297|8240297 CAGTATT 7mer-m8 dme-miR-8-3p 2R + 8239920 8239984 3'utr pnut FlyBase G10615.1 ACATATAACACATAGCAGTTGCAGTATTTTACCAATATATATCCACGCATTACTTGACGAAACAC 25 8239938 0.934903954 7 24 174 1 1.505149978 0 0.24 0.40625 25 0 0 32 2R:8239920-8239984 7 29.5 1038 FBgn0013726 2422.526667 120.4666667 184.8733333 0.012177369 0.244881018 0.159568714 3 3 3 0.25 dme-miR-1006-3p 7mer-A1 GAATTTA 2R 8597565 8597571 - 2R_8597565_8597571_- 0.606171421 0.82210981 0.714140615 0.152691507 CG8735 FBtr0339357|FBtr0088730 8596970|8597526 8597686|8597686 2R - 8597550 8597598 3'utr CG8735 FlyBase G21027.1 ATTTGAAAAAGAATCATCTGTTATCATGAATTTATTGTCGAAAAAAAAA 7 8597564 0.9807775 5 7 53 1 0.84509804 0.142857143 0 0 7 0 0 7 2R:8597550-8597598 7 CG8735 FBtr0339357|FBtr0088730 8596970|8597526 8597686|8597686 GAATTTA 7mer-A1 dme-miR-1006-3p 2R - 8597559 8597592 3'utr CG8735 FlyBase G15940.1 AAAAGAATCATCTGTTATCATGAATTTATTGTCG 7 8597572 0.664854065 4 5 66 0.818181818 0.954242509 0.454545455 0.428571429 0.636363636 7 2 0 9 2R:8597559-8597592 7 7 1039 FBgn0033309 330.0133333 24.15666667 37.01 0.021211264 0.289775079 0.189138071 -7 1 -3 0.25 dme-miR-252-5p 7mer-m8 GTACTTA 2R 8664859 8664865 + 2R_8664859_8664865_+ 0.356441447 0.329231935 0.342836691 0.019240022 ptc FBtr0089427 8664335 8665223 2R + 8664831 8664872 3'utr ptc FlyBase G14011.1 ATTGTAACACACGCAAAACACACACAATGTACTTACATATAA 27 8664858 0.96645889 3 23 117 0.882352941 1.176091259 0 0.185185185 0.352941176 27 3 1 30 2R:8664831-8664872 7 ptc FBtr0089427 8664335 8665223 GTACTTA 7mer-m8 dme-miR-252-5p 2R + 8664811 8664872 3'utr ptc FlyBase G10663.1 ACTTAAACTTAGAGATATTTATTGTAACACACGCAAAACACACACAATGTACTTACATATAA 18 8664858 0.965700495 3 18 87 1 1.477121255 0 0.5 0.7 18 0 0 30 2R:8664811-8664872 7 21 1040 FBgn0003892 243 5.353333333 8.3 0.086419753 3.922789539 2.530120482 1 1 1 0.25 dme-miR-2a-2-5p 8mer-A1 TGATGAGA 2R 8682043 8682050 + 2R_8682043_8682050_+ 0.598995596 0.574211451 0.586603523 0.017525005 Acsl FBtr0088700|FBtr0100430|FBtr0088701|FBtr0088699|FBtr0100428|FBtr0333001|FBtr0100431|FBtr0100427|FBtr0100429|FBtr0100426 8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604 8682791|8682791|8682339|8682791|8682791|8682339|8682791|8683022|8682791|8682791 2R + 8681950 8682166 3'utr Acsl FlyBase G14034.1 AAGCTGAGTTTGGTTTGGAAATGCGCTGTGTATGTGCTAGGAATGCTGTTCAACCGATTGACAATGATAATGGTAATGATAACTGAATGCCGATGATGAGAAGGAATATTGTATACTGTACAGTTTTCGGTTTATAGTACATTGTGTGGCAAATTTATATTGCAGAAAAATACTTATTTTTATATTAAGCTTAAGTGGTTGCCTATTAATTATGTAC 102 8682043 0.903087221 28 93 704 0.912 1.45484486 0.208 0.225490196 0.368 102 8 3 114 2R:8681950-8682166 8 Acsl FBtr0100428|FBtr0333001|FBtr0100427|FBtr0100431|FBtr0100426|FBtr0100429|FBtr0088700|FBtr0100430|FBtr0088701|FBtr0088699 8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604 8682791|8682339|8683022|8682791|8682791|8682791|8682791|8682791|8682339|8682791 TGATGAGA 8mer-A1 dme-miR-2a-2-5p 2R + 8681891 8682101 3'utr Acsl FlyBase G10682.1 ATTACTCGTTTCTCATTTTAATAAAGTTCGCAAAGACTTGCTTGGCAGATATGTAGCTGAAGCTGAGTTTGGTTTGGAAATGCGCTGTGTATGTGCTAGGAATGCTGTTCAACCGATTGACAATGATAATGGTAATGATAACTGAATGCCGATGATGAGAAGGAATATTGTATACTGTACAGTTTTCGGTTTATAGTACATTGTGTGGCAA 71 8682013 0.978200447 27 71 477 1 2.025305865 0.320754717 0.281690141 0.518867925 71 0 0 106 2R:8681891-8682101 8 21 1041 FBgn0263120 3324.373333 107.4633333 164.07 0.00631698 0.195415491 0.127994149 0 30 15 0.25 dme-miR-999-3p 6mer3-8 AGTTAA 2R 8682709 8682714 + 2R_8682709_8682714_+ 0.73440712 0.992338844 0.863372982 0.182385254 Acsl FBtr0088700|FBtr0100430|FBtr0088699|FBtr0100428|FBtr0100431|FBtr0100427|FBtr0100429|FBtr0100426 8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604 8682791|8682791|8682791|8682791|8682791|8683022|8682791|8682791 2R + 8682645 8682778 3'utr Acsl FlyBase G14039.1 AAAATGTAATAACATTTGTTTTAGATGTGCAAGAACTTTTTGAATAAATTGTAGTCATATTTTTAGTTAAACTATGTATATTTAGGAAACGTTTAGCAATTTTTTGTGGAAACGTTACGTTTCTTTTCAATAAA 33 8682683 0.990703403 15 32 320 0.975 1.591064607 0.225 0.212121212 0.35 33 1 0 39 2R:8682645-8682778 6 Acsl FBtr0100428|FBtr0100427|FBtr0100431|FBtr0100426|FBtr0100429|FBtr0088700|FBtr0100430|FBtr0088699 8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604 8682791|8683022|8682791|8682791|8682791|8682791|8682791|8682791 AGTTAA 6mer3-8 dme-miR-999-3p 2R + 8682655 8682727 3'utr Acsl FlyBase G10686.1 AACATTTGTTTTAGATGTGCAAGAACTTTTTGAATAAATTGTAGTCATATTTTTAGTTAAACTATGTATATTT 31 8682683 0.799135224 10 28 340 0.897959184 1.643452676 0.204081633 0.483870968 0.673469388 31 5 0 44 2R:8682655-8682727 6 13 1042 FBgn0263120 3324.373333 107.4633333 164.07 0.003910511 0.120971494 0.079234473 26 26 26 0.25 dme-miR-11-3p 7mer-m1 TGTGATG 2R 8718382 8718388 - 2R_8718382_8718388_- 0.609600323 0.611347485 0.610473904 0.001235457 CG14767 FBtr0088719|FBtr0088720|FBtr0088718 8718015|8718015|8718015 8718693|8718693|8718693 2R - 8718357 8718411 3'utr CG14767 FlyBase G21054.1 AAGCATTAAAGCCAAAAACATATTGTGATGCTGGCGAGGAAAGCATCAATTCCTT 27 8718389 0.962657695 7 26 131 0.96969697 1.204119983 0 0.185185185 0.333333333 27 0 1 32 2R:8718357-8718411 7 CG14767 FBtr0088718|FBtr0088720|FBtr0088719 8718015|8718015|8718015 8718693|8718693|8718693 TGTGATG 7mer-m1 dme-miR-11-3p 2R - 8718314 8718403 3'utr CG14767 FlyBase G15959.1 AAGCCAAAAACATATTGTGATGCTGGCGAGGAAAGCATCAATTCCTTTTCGGCCGCATCTGACCCGATTTTAGCTGCAACAATCTGTTAG 18 8718389 0.969018511 8 18 100 1 1.380211242 0 0.277777778 0.458333333 18 0 0 24 2R:8718314-8718403 7 17.5 1043 FBgn0040777 1544.016667 90.17333333 137.3633333 0.011334075 0.194070679 0.127399355 1 1 1 0.25 dme-miR-980-3p 7mer-A1 GCAGCTA 2R 8718575 8718581 - 2R_8718575_8718581_- 0.814590468 0.747713152 0.78115181 0.047289392 CG14767 FBtr0088719|FBtr0088720|FBtr0088718 8718015|8718015|8718015 8718693|8718693|8718693 2R - 8718504 8718839 stop_codon CG14767 FlyBase G21056.1 TTGATGTAATCGGTGGCATTCCGCCTCCTCCGCCCTACAACGACGTTGCCGATGCCCAGGTGCAAGTGCCATCGCAATCGCCGCTGCATCGCCAGCCAAACATCCCGGGACAAGTATTCGGCGGACGCGACGAAAGCCAGGCTTAAACAGTACTTTCGACTGGATTGCTTCTCATGGCGAGTGGGTTGTGATCAGCGGTGACCACCCCTCTCCCATCCTCTTCTTGCCCAGATGATCTGGTTTCTGGTCCCTCATTTCGCAGCTATCATTCCCAGGCACACATACACCTTCTTAATGGTTGCTTCAATGTATTGAACACTGTTTTTAGAAAAACGA 272 8718598 0.999953233 54 254 2070 0.943396226 2 0.257861635 0.139705882 0.264150943 272 16 2 300 2R:8718504-8718839 7 CG14767 FBtr0088718|FBtr0088720|FBtr0088719 8718015|8718015|8718015 8718693|8718693|8718693 GCAGCTA 7mer-A1 dme-miR-980-3p 2R - 8718535 8718695 stop_codon CG14767 FlyBase G15961.1 AAACAGTACTTTCGACTGGATTGCTTCTCATGGCGAGTGGGTTGTGATCAGCGGTGACCACCCCTCTCCCATCCTCTTCTTGCCCAGATGATCTGGTTTCTGGTCCCTCATTTCGCAGCTATCATTCCCAGGCACACATACACCTTCTTAATGGTTGCTTC 149 8718598 0.984723318 28 135 1184 0.92173913 1.72427587 0.256521739 0.375838926 0.595652174 149 15 3 212 2R:8718535-8718695 7 48 1044 FBgn0040777 1544.016667 90.17333333 137.3633333 0.031087747 0.532308147 0.34943823 17 17 17 0.25 dme-miR-252-5p 6mer3-8 GTACTT 2R 8729550 8729555 - 2R_8729550_8729555_- 0.919943999 0.977469068 0.948706534 0.040676388 stmA FBtr0339341|FBtr0088715|FBtr0088716|FBtr0301639 8729500|8729500|8729500|8729500 8729726|8729726|8729726|8729726 2R - 8729539 8729575 3'utr stmA FlyBase G21064.1 TGTTAAACGACCCCGAATATGTACTTTGATTTAATTG 9 8729556 0.978764051 5 9 61 1 1.079181246 0 0.222222222 0.416666667 9 0 0 12 2R:8729539-8729575 6 stmA FBtr0339341|FBtr0088715|FBtr0088716|FBtr0301639 8729500|8729500|8729500|8729500 8729726|8729726|8729726|8729726 GTACTT 6mer3-8 dme-miR-252-5p 2R - 8729532 8729571 3'utr stmA FlyBase G15970.1 AAACGACCCCGAATATGTACTTTGATTTAATTGTTAGACA 11 8729557 0.977096948 5 10 72 0.933333333 1.146128036 0.066666667 0.181818182 0.4 11 1 0 14 2R:8729532-8729571 6 10 1045 FBgn0086784 383.3333333 16.82 25.63666667 0.026086957 0.594530321 0.390066311 1 2 1.5 0.25 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 8888480 8888486 - 2R_8888480_8888486_- 0.815703808 0.822085942 0.818894875 0.004512826 CG8272 FBtr0088686|FBtr0330246 8888402|8888402 8889036|8888973 2R - 8888433 8888532 3'utr CG8272 FlyBase G21079.1 AACACATTGTGGTTATAATTACAACAAGTCACTGTCACTTCTTATAAGCTTTATACGATTAAATCGTTAACTGAACTCAACTGACTTAAGTGGTTAATGT 43 8888488 0.989829548 8 40 394 0.9 1.653212514 0.02 0.139534884 0.26 43 5 0 45 2R:8888433-8888532 7 CG8272 FBtr0088686|FBtr0330246 8888402|8888402 8889036|8888973 AGCTTTA 7mer-A1 dme-miR-79-3p 2R - 8888434 8888514 3'utr CG8272 FlyBase G15981.1 TTACAACAAGTCACTGTCACTTCTTATAAGCTTTATACGATTAAATCGTTAACTGAACTCAACTGACTTAAGTGGTTAATG 23 8888488 0.974498895 8 22 194 0.966666667 1.462397998 0.033333333 0.260869565 0.433333333 23 1 0 29 2R:8888434-8888514 7 23 1046 FBgn0033337 113.6666667 4.916666667 7.516666667 0.202346041 4.677966102 3.059866962 2 2 2 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2R 8888664 8888669 - 2R_8888664_8888669_- 0.730948971 0.730511217 0.730730094 0.000309571 CG8272 FBtr0088686|FBtr0088686|FBtr0088686|FBtr0330246|FBtr0330246|FBtr0330246 8888402|8888402|8888402|8888402|8888402|8888402 8889036|8889036|8889036|8888973|8888973|8888973 2R - 8888634 8888681 3'utr CG8272 FlyBase G21080.1 GATTGTAAATTATGTGATCGGTTGCCAAAATTAAAGTTGTTTGTTTGA 7 8888671 0.990116859 5 6 62 0.7 0.84509804 0.4 0.285714286 0.5 7 3 0 7 2R:8888634-8888681 6 CG8272 FBtr0088686|FBtr0088686|FBtr0088686|FBtr0330246|FBtr0330246|FBtr0330246 8888402|8888402|8888402|8888402|8888402|8888402 8889036|8889036|8889036|8888973|8888973|8888973 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 8888635 8888685 3'utr CG8272 FlyBase G15982.1 ACACGATTGTAAATTATGTGATCGGTTGCCAAAATTAAAGTTGTTTGTTTG 9 8888659 0.882667273 3 9 76 1 1.113943352 0.384615385 0.444444444 0.615384615 9 0 0 13 2R:8888635-8888685 6 8 1047 FBgn0033337 113.6666667 4.916666667 7.516666667 0.070381232 1.627118644 1.064301552 2 -10 -4 0.25 dme-miR-970-3p 6mer3-8 TCTTAT 2R 8898620 8898625 + 2R_8898620_8898625_+ 0.978235303 0.822716475 0.900475889 0.109968398 Sec31 FBtr0088643|FBtr0345224|FBtr0339302|FBtr0088642 8898576|8898576|8898576|8898576 8898798|8898798|8898798|8898798 2R + 8898561 8898654 stop_codon Sec31 FlyBase G14093.1 AGTTGGTTCTGCGTTAGAGCCCCGTCGCCGGATCGCAGCCAAGTTCACTAAACGTATATTCTTATTGTGTCTTCAGATATCGATGTCAAACACA 12 8898604 0.964490998 7 12 66 1 1.176091259 0.333333333 0.25 0.4 12 0 0 15 2R:8898561-8898654 6 Sec31 FBtr0088642|FBtr0339302|FBtr0345224|FBtr0088643 8898576|8898576|8898576|8898576 8898798|8898798|8898798|8898798 TCTTAT 6mer3-8 dme-miR-970-3p 2R + 8898577 8898657 3'utr Sec31 FlyBase G10729.1 GAGCCCCGTCGCCGGATCGCAGCCAAGTTCACTAAACGTATATTCTTATTGTGTCTTCAGATATCGATGTCAAACACAAAA 11 8898619 0.985314224 6 10 84 0.882352941 1.176091259 0.117647059 0.363636364 0.588235294 11 2 0 15 2R:8898577-8898657 6 4.5 1048 FBgn0033339 1910.493333 56.05666667 85.60333333 0.002355413 0.080275911 0.052568046 16 1 8.5 0.25 dme-miR-1008-3p 6mer3-8 AGCTGT 2R 8917932 8917937 + 2R_8917932_8917937_+ 0.988668386 0.999612594 0.99414049 0.007738718 lin FBtr0088651 8917676 8918234 2R + 8917920 8917962 3'utr lin FlyBase G14118.1 AGATACATACCCAGCTGTATGTAATTGTCATTGTAATTGTAAT 7 8917945 0.987816192 5 6 54 0.888888889 0.602059991 0 0.142857143 0.333333333 7 0 1 8 2R:8917920-8917962 6 lin FBtr0088651 8917676 8918234 AGCTGT 6mer3-8 dme-miR-1008-3p 2R + 8917919 8917970 3'utr lin FlyBase G10750.1 CAGATACATACCCAGCTGTATGTAATTGTCATTGTAATTGTAATGAGCATCA 6 8917944 0.982332006 4 6 47 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 2R:8917919-8917970 6 3.5 1049 FBgn0002552 347.3366667 11.45666667 17.51666667 0.010076679 0.305498982 0.199809705 -13 -12 -12.5 0.25 dme-miR-965-3p 8mer-A1 TACGCTTA 2R 8944614 8944621 - 2R_8944614_8944621_- 0.486728809 0.624904435 0.555816622 0.097704904 CG8230 FBtr0088674 8944296 8944905 2R - 8944603 8944634 3'utr CG8230 FlyBase G21138.1 ACATAGACATAGCTACGCTTATACTAATGTGT 8 8944620 0.681315505 4 8 45 1 0.903089987 0 0 0 8 0 0 8 2R:8944603-8944634 8 CG8230 FBtr0088674 8944296 8944905 TACGCTTA 8mer-A1 dme-miR-965-3p 2R - 8944598 8944634 3'utr CG8230 FlyBase G16024.1 ACATAGACATAGCTACGCTTATACTAATGTGTATGTT 6 8944620 0.740289837 4 6 44 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 2R:8944598-8944634 8 7 1050 FBgn0027607 600.88 26.23666667 40.29 0.011649581 0.266802185 0.173740382 -1 -1 -1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 8948437 8948443 - 2R_8948437_8948443_- 0.555456062 0.553317615 0.554386838 0.001512148 CG33199 FBtr0307344|FBtr0307344|FBtr0307344|FBtr0088688|FBtr0088688|FBtr0088688 8947679|8947679|8947679|8948111|8948111|8948111 8948752|8948752|8948752|8948752|8948752|8948752 2R - 8948365 8948623 3'utr CG33199 FlyBase G21151.1 TTGCCTAAGTTAAGTCACCCACTCACCACAGACCCAAGCGGAACTCGGACATGGAGGCTTGTTTTGTAATATTCTGTTCGATAAACTAACTGATCGGAGGCGAGGATCTGTGCGCATATATAGATATATTTTCTTGTTTACACATGCACACCATGCGTCGCCAACTAAAAGGAATAAATTTGTGATAAATCGTGTATGAAAAAAGCCCATCGGCAGACAAACTGAACGAAGGAGCGATGGAGGAGAAGATTCGCTGAGC 327 8948445 0.974889446 26 311 1938 0.957178841 1.625541087 0.173803526 0.171253823 0.317380353 327 9 8 380 2R:8948365-8948623 7 CG33199 FBtr0088688|FBtr0088688|FBtr0088688|FBtr0307344|FBtr0307344|FBtr0307344 8948111|8948111|8948111|8947679|8947679|8947679 8948752|8948752|8948752|8948752|8948752|8948752 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 8948357 8948594 3'utr CG33199 FlyBase G16033.1 AGACCCAAGCGGAACTCGGACATGGAGGCTTGTTTTGTAATATTCTGTTCGATAAACTAACTGATCGGAGGCGAGGATCTGTGCGCATATATAGATATATTTTCTTGTTTACACATGCACACCATGCGTCGCCAACTAAAAGGAATAAATTTGTGATAAATCGTGTATGAAAAAAGCCCATCGGCAGACAAACTGAACGAAGGAGCGATGGAGGAGAAGATTCGCTGAGCTTGCGGGA 273 8948445 0.999965586 23 265 1650 0.973614776 2.089905111 0.232189974 0.32967033 0.517150396 273 8 2 369 2R:8948357-8948594 7 228 1051 FBgn0053199 249.6866667 28.21 43.29 0.913144474 8.08224034 5.266805267 2 2 2 0.25 dme-miR-14-3p 8mer-A1 AAGACTGA 2R 8960983 8960990 + 2R_8960983_8960990_+ 0.636834559 0.641011643 0.638923101 0.002953585 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 2R + 8960954 8961011 3'utr babo FlyBase G14181.1 TAACGAAAACAAAACAGTAAGACTATGTCAAGACTGAGCAGCAGTGGAAAGCAGTGAG 85 8960980 0.960788884 6 66 330 0.777777778 1.886490725 0.515151515 0.152941176 0.272727273 85 22 0 77 2R:8960954-8961011 8 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 AAGACTGA 8mer-A1 dme-miR-14-3p 2R + 8960958 8961007 3'utr babo FlyBase G10788.1 GAAAACAAAACAGTAAGACTATGTCAAGACTGAGCAGCAGTGGAAAGCAG 55 8960980 0.898445185 5 41 207 0.7625 1.30820858 0.6375 0.345454545 0.55 55 17 2 61 2R:8960958-8961007 8 64.5 1052 FBgn0011300 981.73 24.67666667 37.73 0.065700345 2.613805214 1.709514975 3 3 3 0.25 dme-miR-305-3p 6mer2-7 TGTGCC 2R 8961243 8961248 + 2R_8961243_8961248_+ 0.826118758 0.943058861 0.88458881 0.082689138 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 2R + 8961181 8961281 3'utr babo FlyBase G14182.1 ACGATTTGGCGCGCCGCCTGCTCACGAACAGCTTGCCATGCCCACGTCGCTATTGCTGCTGCTGTGCCTCTAAAACTTAATGAACACCACCCCTCTCCCAT 38 8961242 0.787956745 14 30 224 0.854166667 1.612783857 0.270833333 0.236842105 0.395833333 38 7 0 41 2R:8961181-8961281 6 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 TGTGCC 6mer2-7 dme-miR-305-3p 2R + 8961145 8961263 3'utr babo FlyBase G10789.1 AAATCGTAACGTAAAAAATAAAATGAAAGGAATCAAACGATTTGGCGCGCCGCCTGCTCACGAACAGCTTGCCATGCCCACGTCGCTATTGCTGCTGCTGTGCCTCTAAAACTTAATGA 25 8961243 0.976870605 12 24 156 0.96875 1.491361694 0.28125 0.28 0.4375 25 1 0 31 2R:8961145-8961263 6 17.5 1053 FBgn0011300 981.73 24.67666667 37.73 0.017825675 0.709171957 0.463821892 1 0 0.5 0.25 dme-miR-277-3p 6mer3-8 TGCATT 2R 8962154 8962159 + 2R_8962154_8962159_+ 0.814035165 0.999738897 0.906887031 0.131312346 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 2R + 8962108 8962178 3'utr babo FlyBase G14188.1 AGGTTTTGAAACTATTCCTGTAATTGTAAAATCTGTAAATAATCTGTGCATTCAGTGCATGCGAGTCAAAC 14 8962158 0.915220831 6 13 111 0.888888889 1.204119983 0.166666667 0.285714286 0.444444444 14 2 0 16 2R:8962108-8962178 6 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 TGCATT 6mer3-8 dme-miR-277-3p 2R + 8962153 8962214 3'utr babo FlyBase G10795.1 GTGCATTCAGTGCATGCGAGTCAAACAAAAAATGAGAGACAAGTTTCGAAGGATAGCGGACT 5 8962178 0.930321195 3 4 19 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 2R:8962153-8962214 6 4 1054 FBgn0011300 981.73 24.67666667 37.73 0.00407444 0.162096447 0.106016433 -4 -24 -14 0.25 dme-miR-14-3p 6mer3-8 AAGACT 2R 8962265 8962270 + 2R_8962265_8962270_+ 0.806576475 0.793682153 0.800129314 0.009117647 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 2R + 8962241 8962287 3'utr babo FlyBase G14189.1 AAGTTTAAGCCGAAAGTTGTTCTTAAGACTAACCCCCAATACAACCT 29 8962263 0.734127703 2 27 174 0.939393939 1.190331698 0.090909091 0.103448276 0.212121212 29 1 1 31 2R:8962241-8962287 6 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 AAGACT 6mer3-8 dme-miR-14-3p 2R + 8962241 8962289 3'utr babo FlyBase G10796.1 AAGTTTAAGCCGAAAGTTGTTCTTAAGACTAACCCCCAATACAACCTCC 13 8962263 0.735021929 2 13 86 1 1.301029996 0.05 0.384615385 0.6 13 0 0 20 2R:8962241-8962289 6 20 1055 FBgn0011300 981.73 24.67666667 37.73 0.0203722 0.810482237 0.530082163 2 2 2 0.25 dme-miR-965-3p 6mer3-8 TACGCT 2R 8969659 8969664 - 2R_8969659_8969664_- 0.996963043 0.996567828 0.996765436 0.000279449 CG8213 FBtr0339307|FBtr0273385|FBtr0273384 8969344|8969344|8969344 8971208|8970017|8970017 2R - 8969635 8969679 3'utr CG8213 FlyBase G21162.1 AGTCTGAATGAGAATTACGCTGATTGCAAAACGTAGGGATAAGAC 6 8969660 0.974791014 3 4 30 0.875 0.84509804 0.125 0.333333333 0.5 6 1 0 7 2R:8969635-8969679 6 CG8213 FBtr0273384|FBtr0339307|FBtr0273385 8969344|8969344|8969344 8970017|8971208|8970017 TACGCT 6mer3-8 dme-miR-965-3p 2R - 8969635 8969699 3'utr CG8213 FlyBase G16043.1 CGCGTGCCTAACACTTGTAGAGTCTGAATGAGAATTACGCTGATTGCAAAACGTAGGGATAAGAC 8 8969664 0.970780457 6 7 45 0.923076923 1.079181246 0.230769231 0.5 0.692307692 8 1 0 12 2R:8969635-8969699 6 5 1056 FBgn0033359 56 1.02 1.516666667 0.089285714 4.901960784 3.296703297 -4 0 -2 0.25 dme-miR-317-3p 8mer-A1 TGTGTTCA 2R 9097257 9097264 - 2R_9097257_9097264_- 0.557623985 0.557512817 0.557568401 7.86E-05 CG8078 FBtr0088631 9096929 9097310 2R - 9097242 9097293 3'utr CG8078 FlyBase G21171.1 ATTTATTCGTGATTCCACAAGATACAAATTGTGTTCATCCAAGGTTGCCAAC 11 9097265 0.790419418 2 11 93 1 1.079181246 0.166666667 0.090909091 0.166666667 11 0 0 12 2R:9097242-9097293 8 CG8078 FBtr0088631 9096929 9097310 TGTGTTCA 8mer-A1 dme-miR-317-3p 2R - 9097240 9097287 3'utr CG8078 FlyBase G16050.1 TCGTGATTCCACAAGATACAAATTGTGTTCATCCAAGGTTGCCAACCT 8 9097265 0.980348838 2 8 60 1 1.079181246 0.166666667 0.25 0.5 8 0 0 12 2R:9097240-9097287 8 9 1057 FBgn0033375 108.7933333 8.903333333 13.57 0.082725657 1.010857357 0.663227708 1 1 1 0.25 dme-miR-1002-5p 6mer3-8 CTACTT 2R 9105448 9105453 + 2R_9105448_9105453_+ 0.923912028 0.911460184 0.917686106 0.008804752 Vang FBtr0088566 9105387 9106796 2R + 9105427 9105480 stop_codon Vang FlyBase G14220.1 TAGCAACCAGACGCAATCGTCCTACTTGCATGTGTTTGTCTGATTTTCCCAGCT 10 9105449 0.965134252 5 10 56 1 1.113943352 0.230769231 0.3 0.461538462 10 0 0 13 2R:9105427-9105480 6 Vang FBtr0088566 9105387 9106796 CTACTT 6mer3-8 dme-miR-1002-5p 2R + 9105401 9105475 stop_codon Vang FlyBase G10814.1 GCCCCTCCAATCAACACTCCCACTCATAGCAACCAGACGCAATCGTCCTACTTGCATGTGTTTGTCTGATTTTCC 13 9105449 0.983290241 8 11 81 0.875 1.146128036 0.0625 0.333333333 0.5 12 2 0 14 2R:9105401-9105475 6 9 1058 FBgn0015838 1538.993333 53.09333333 81.26666667 0.005847979 0.169512808 0.110746514 -1 -1 -1 0.25 dme-miR-33-5p 6mer2-7 AATGCA 2R 9105994 9105999 + 2R_9105994_9105999_+ 0.870186775 0.87028301 0.870234893 6.80E-05 Vang FBtr0330624|FBtr0088566 9105468|9105387 9106796|9106796 2R + 9105863 9106011 3'utr Vang FlyBase G14221.3 GTATCATCCTAAACCGACGCGAACATATCACACCCTTTGATAAGCAAACATGACTTACAAGTTCCCAAAGTATTAATTATAAGAATGATGGTTTGGCTTGCCGAACCGCGATCTTCAGATATCAACTCTTAAATGCAGCTCTTTTATAC 125 9105996 0.869110199 27 113 912 0.918367347 1.528273777 0.108843537 0.177419355 0.306122449 124 9 3 135 2R:9105863-9106011 6 Vang FBtr0330624|FBtr0088566 9105468|9105387 9106796|9106796 AATGCA 6mer2-7 dme-miR-33-5p 2R + 9105695 9106021 3'utr Vang FlyBase G10815.1 AAGTTTAGAAAGGAAAAGTTGTTGTGAGAACAAAATGTCTAGGCAGGCCTCAGCAGCTAAATTTTGATCTTGTAACAAATGATTATTAGATGAGAAGGCAACGTACTTATCAGTGCTAAACTTGAACTTATGACCCGAATATCAAGAAACAATGCTCAAAAGCCCAGTGTATCATCCTAAACCGACGCGAACATATCACACCCTTTGATAAGCAAACATGACTTACAAGTTCCCAAAGTATTAATTATAAGAATGATGGTTTGGCTTGCCGAACCGCGATCTTCAGATATCAACTCTTAAATGCAGCTCTTTTATACACGATTTTTA 161 9105996 0.896804901 44 142 1132 0.902542373 1.425289616 0.199152542 0.347826087 0.555084746 161 16 7 213 2R:9105695-9106021 6 69 1059 FBgn0015838 1538.993333 53.09333333 81.26666667 0.044834502 1.299598192 0.849056604 -2 -2 -2 0.25 dme-miR-277-3p 7mer-m8 TGCATTT 2R 9106357 9106363 + 2R_9106357_9106363_+ 0.614612936 0.620140827 0.617376881 0.003908816 Vang FBtr0330624|FBtr0088566 9105468|9105387 9106796|9106796 2R + 9106296 9106373 3'utr Vang FlyBase G14224.1 CAACTATAACTCGAATGCAACTGATGACAAATACATAATATAAGCGAAGACTGCCTGAATATGCATTTTATACACACA 50 9106352 0.767491 11 47 248 0.964912281 1.740362689 0.070175439 0.14 0.245614035 50 2 0 55 2R:9106296-9106373 7 Vang FBtr0330624|FBtr0088566 9105468|9105387 9106796|9106796 TGCATTT 7mer-m8 dme-miR-277-3p 2R + 9106301 9106525 3'utr Vang FlyBase G10818.1 ATAACTCGAATGCAACTGATGACAAATACATAATATAAGCGAAGACTGCCTGAATATGCATTTTATACACACAAATTGCCAACAGCCACTAGCAGGTGTATGTACTAGCCTGTGCATAGCAACCACATATATACAAAAACTCGTGTATTTTTAGAGACAAAATTATAGTGATAAGGACCCGAATTCGTATTCGAACATGTGTACGTTCCAGTGAACCCAATCTAT 93 9106351 0.969636089 28 88 494 0.937931034 2.133538908 0.172413793 0.397849462 0.613793103 93 9 0 136 2R:9106301-9106525 7 16.5 1060 FBgn0015838 1538.993333 53.09333333 81.26666667 0.010721294 0.310773481 0.203035275 5 6 5.5 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 2R 9119625 9119630 + 2R_9119625_9119630_+ 0.938295125 0.957209532 0.947752329 0.013374501 Su(var)2-10 FBtr0088576|FBtr0088571 9119072|9119072 9120105|9120105 2R + 9119574 9119647 3'utr Su(var)2-10 FlyBase G14244.1 ATGTTTATGTTTCAAAAAAGTGACCAGAAGGGCTATTTATCATGATAATTTTGTGTTAGATCTACGGAGTCCAG 7 9119623 0.986005129 6 7 61 1 0.84509804 0.714285714 0 0 7 0 0 7 2R:9119574-9119647 6 Su(var)2-10 FBtr0088571|FBtr0088576 9119072|9119072 9120105|9120105 TGTGTT 6mer3-8 dme-miR-317-3p 2R + 9119579 9119646 3'utr Su(var)2-10 FlyBase G10840.1 TATGTTTCAAAAAAGTGACCAGAAGGGCTATTTATCATGATAATTTTGTGTTAGATCTACGGAGTCCA 11 9119610 0.968500286 6 10 61 1 1.255272505 0.055555556 0.363636364 0.611111111 11 0 0 18 2R:9119579-9119646 6 3.5 1061 FBgn0003612 1532.696667 79.66 122.23 0.002283557 0.043936731 0.028634541 2 15 8.5 0.25 dme-miR-282-5p 8mer-A1 AGAGGCTA 2R 9120674 9120681 + 2R_9120674_9120681_+ 0.637828629 0.637897791 0.63786321 4.89E-05 Su(var)2-10 FBtr0088577|FBtr0088570|FBtr0088575 9120537|9120537|9120537 9120816|9120816|9120816 2R + 9120631 9120719 3'utr Su(var)2-10 FlyBase G14248.1 TTTTCGGTTTCACTTCCGGTGGCGCACGGCCACATATTACCTTAGAGGCTATTCTTCGGCGTTCGATTCGCCGCCTTGCATCACCTCAT 36 9120673 0.985591309 9 35 289 0.953488372 1.612783857 0.069767442 0.194444444 0.325581395 36 2 0 41 2R:9120631-9120719 8 Su(var)2-10 FBtr0088575|FBtr0088570|FBtr0088577 9120537|9120537|9120537 9120816|9120816|9120816 AGAGGCTA 8mer-A1 dme-miR-282-5p 2R + 9120656 9120695 3'utr Su(var)2-10 FlyBase G10846.1 ACGGCCACATATTACCTTAGAGGCTATTCTTCGGCGTTCG 20 9120673 0.771858149 4 17 148 0.857142857 1.380211242 0.142857143 0.35 0.535714286 20 4 0 24 2R:9120656-9120695 8 25 1062 FBgn0003612 1532.696667 79.66 122.23 0.01631112 0.313833794 0.204532439 1 1 1 0.25 dme-miR-965-3p 6mer3-8 TACGCT 2R 9123400 9123405 - 2R_9123400_9123405_- 0.993783162 0.992554302 0.993168732 0.000868964 CG18659 FBtr0339371|FBtr0306382|FBtr0339372|FBtr0088626|FBtr0306381|FBtr0302497|FBtr0302498 9123302|9123302|9123302|9123302|9123302|9123302|9123302 9127111|9125499|9123701|9123701|9127111|9123701|9123701 2R - 9123308 9123462 3'utr CG18659 FlyBase G21196.1 TTTAACAATTGCATGAATCGGAACTCTCGCTAACTACGCATACTTACATACATATTGTACGCTGGACTTCCAAATCAAAAGACACAAGAATCTAGAGTAGCATGAATTTAAGCCAATTAGCCTAACAAATTACCAATAAATATAAAATAAATTCC 113 9123396 0.962317556 17 109 561 0.970588235 1.819543936 0.139705882 0.168141593 0.308823529 113 3 1 132 2R:9123308-9123462 6 CG18659 FBtr0339372|FBtr0306382|FBtr0339371|FBtr0302498|FBtr0302497|FBtr0306381|FBtr0088626 9123302|9123302|9123302|9123302|9123302|9123302|9123302 9123701|9125499|9127111|9123701|9123701|9127111|9123701 TACGCT 6mer3-8 dme-miR-965-3p 2R - 9123320 9123459 3'utr CG18659 FlyBase G16073.1 AACAATTGCATGAATCGGAACTCTCGCTAACTACGCATACTTACATACATATTGTACGCTGGACTTCCAAATCAAAAGACACAAGAATCTAGAGTAGCATGAATTTAAGCCAATTAGCCTAACAAATTACCAATAAATAT 87 9123399 0.964967362 16 85 445 0.967479675 1.598425707 0.097560976 0.310344828 0.512195122 87 2 2 119 2R:9123320-9123459 6 77 1063 FBgn0027561 809.6966667 28.81666667 43.97666667 0.095097341 2.672064777 1.750928523 -9 -6 -7.5 0.25 dme-miR-278-3p 7mer-A1 CCACCGA 2R 9124998 9125004 - 2R_9124998_9125004_- 0.629794993 0.809463988 0.719629491 0.127045168 CG18659 FBtr0339371|FBtr0306382|FBtr0306381 9123302|9123302|9123302 9127111|9125499|9127111 2R - 9124877 9125070 5'utr CG18659 FlyBase G21201.1 AGACCGCGTCAGCCCCTGCCTACCGCCGATTCCAGCAGCTTTGATAGTCCGCCGGACGTACAATCTCCACCGATTCCGCCCCGGAGGCAGGGCAGCTCGAATGCGATTGTGGCGGCCACGGCTGCAGCCGTCAGTGCAGAGATTAGCAAACTGGAACGTAACTGCTGGAAGGACGAGCCCGGAAATGATTCTGT 488 9124997 0.895668955 13 487 1430 0.990654206 2.72427587 0.011214953 0.081967213 0.162616822 488 5 0 530 2R:9124877-9125070 7 CG18659 FBtr0306382|FBtr0339371|FBtr0306381 9123302|9123302|9123302 9125499|9127111|9127111 CCACCGA 7mer-A1 dme-miR-278-3p 2R - 9124953 9125011 5'utr CG18659 FlyBase G16081.1 ACAATCTCCACCGATTCCGCCCCGGAGGCAGGGCAGCTCGAATGCGATTGTGGCGGCCA 160 9124997 0.895102274 3 156 462 0.973568282 1.566241023 0.013215859 0.35 0.54185022 160 1 5 221 2R:9124953-9125011 7 314 1064 FBgn0027561 809.6966667 28.81666667 43.97666667 0.387799546 10.89647195 7.14015008 -7 -7 -7 0.25 dme-miR-1008-3p 7mer-A1 GCTGTGA 2R 9125426 9125432 - 2R_9125426_9125432_- 0.750750555 0.751062902 0.750906728 0.000220829 CG18659 FBtr0306382 9123302 9125499 2R - 9125399 9125482 5'utr CG18659 FlyBase G21203.1 AGCCGTTCACATGCTTGCCGCTAAGCTAAATCGACCACTCATCTCGATGTGCTGTGAATTTATGTTGTTCTCATGCTCTTCTTG 165 9125435 0.987219047 8 162 1432 0.989189189 2.26245109 0.064864865 0.109090909 0.205405405 165 2 0 183 2R:9125399-9125482 7 CG18659 FBtr0306382 9123302 9125499 GCTGTGA 7mer-A1 dme-miR-1008-3p 2R - 9125385 9125483 5'utr CG18659 FlyBase G16083.1 CAGCCGTTCACATGCTTGCCGCTAAGCTAAATCGACCACTCATCTCGATGTGCTGTGAATTTATGTTGTTCTCATGCTCTTCTTGTTTTTGTTTCCTTG 142 9125435 0.988007058 9 138 1247 0.977578475 1.736396502 0.058295964 0.457746479 0.65470852 142 2 3 218 2R:9125385-9125483 7 147.5 1065 FBgn0027561 809.6966667 28.81666667 43.97666667 0.182166984 5.118565645 3.354051391 3 3 3 0.25 dme-miR-283-5p 6mer3-8 TGATAT 2R 9135184 9135189 + 2R_9135184_9135189_+ 0.642115067 0.760689187 0.701402127 0.08384455 Hydr1 FBtr0300180|FBtr0339361|FBtr0339360|FBtr0302496|FBtr0088580 9135052|9135052|9135052|9135052|9135052 9135453|9135453|9135453|9135453|9135453 2R + 9135074 9135254 3'utr Hydr1 FlyBase G14265.1 GGTCGGTCGGTCCGCTAGTCTAGTTCAGTTTTTGTCCAGTTGAACACGTAGATATACGAGAATGTTTGTATTCCGATAGATTGCCGTCGGCGAAGACTCTTGTACACATGTGATATGAAACGTTGATCAAAATCCAAAGTGTTGTTATACTTATATACAGCGAACAGGGAACCAAATTATC 55 9135174 0.978282638 20 51 338 0.930555556 1.826074803 0.208333333 0.236363636 0.416666667 55 5 0 67 2R:9135074-9135254 6 Hydr1 FBtr0088580|FBtr0302496|FBtr0339360|FBtr0339361|FBtr0300180 9135052|9135052|9135052|9135052|9135052 9135453|9135453|9135453|9135453|9135453 TGATAT 6mer3-8 dme-miR-283-5p 2R + 9135130 9135221 3'utr Hydr1 FlyBase G10857.1 CGAGAATGTTTGTATTCCGATAGATTGCCGTCGGCGAAGACTCTTGTACACATGTGATATGAAACGTTGATCAAAATCCAAAGTGTTGTTAT 35 9135173 0.928514117 14 33 199 0.942307692 1.389166084 0.173076923 0.314285714 0.538461538 35 2 1 49 2R:9135130-9135221 6 21 1066 FBgn0033382 206.7266667 10.77333333 16.46666667 0.101583411 1.949257426 1.275303644 10 11 10.5 0.25 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 2R 9162302 9162309 - 2R_9162302_9162309_- 0.579827017 0.598550664 0.589188841 0.013239655 CG8046 FBtr0088621 9162035 9162726 2R - 9162278 9162328 3'utr CG8046 FlyBase G21237.1 ACTTTTGTACACCAACGATTGGTGCTAACTACGGATCTGAGCGAGCGCTAA 36 9162310 0.93375182 6 33 183 0.923076923 1.681241237 0.192307692 0.388888889 0.576923077 36 4 0 48 2R:9162278-9162328 8 CG8046 FBtr0088621 9162035 9162726 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 2R - 9162280 9162326 3'utr CG8046 FlyBase G16109.1 TTTTGTACACCAACGATTGGTGCTAACTACGGATCTGAGCGAGCGCT 31 9162310 0.824973097 7 30 164 0.951219512 1.113943352 0.195121951 0.290322581 0.463414634 31 0 2 39 2R:9162280-9162326 8 32.5 1067 FBgn0033388 91.66666667 5.236666667 8.053333333 0.354545455 6.206238065 4.035596026 1 1 1 0.25 dme-miR-190-5p 6mer3-8 ACATAT 2R 9167792 9167797 - 2R_9167792_9167797_- 0.9972806 0.903626571 0.950453586 0.066223378 Rme-8 FBtr0088618|FBtr0339370 9167761|9167761 9168133|9168133 2R - 9167793 9167820 3'utr Rme-8 FlyBase G21252.1 TAGAGCATGCATAAAGTGATTAAACATA 14 9167811 0.631008551 3 14 61 1 1.255272505 0.111111111 0.142857143 0.333333333 14 0 0 18 2R:9167793-9167820 4 Rme-8 FBtr0339370|FBtr0088618 9167761|9167761 9168133|9168133 ACATAT 6mer3-8 dme-miR-190-5p 2R - 9167791 9167823 3'utr Rme-8 FlyBase G16119.1 AACTAGAGCATGCATAAAGTGATTAAACATATT 13 9167809 0.674595167 3 12 65 0.928571429 1.113943352 0.071428571 0.076923077 0.142857143 13 1 0 13 2R:9167791-9167823 6 12 1068 FBgn0015477 1892.016667 29.22333333 44.74333333 0.006342439 0.410630774 0.268196379 14 12 13 0.25 dme-miR-932-5p 7mer-m8 GGAATTG 2R 9168028 9168034 - 2R_9168028_9168034_- 0.693943198 0.691047834 0.692495516 0.002047357 Rme-8 FBtr0088618|FBtr0339370 9167761|9167761 9168133|9168133 2R - 9167996 9168080 3'utr Rme-8 FlyBase G21254.1 CGCTAGCATGAAGCCTTCGATTGCCACGGAATCAGAAAACGGAAACGGAATTGCACGGGTTGCCCCCAATTATTGTATTAAACTT 20 9168009 0.70927178 8 19 119 0.952380952 1.301029996 0.095238095 0.05 0.095238095 20 1 0 20 2R:9167996-9168080 7 Rme-8 FBtr0339370|FBtr0088618 9167761|9167761 9168133|9168133 GGAATTG 7mer-m8 dme-miR-932-5p 2R - 9167989 9168042 3'utr Rme-8 FlyBase G16121.1 ACGGAAACGGAATTGCACGGGTTGCCCCCAATTATTGTATTAAACTTTATTTTA 8 9168030 0.979701294 5 6 43 0.769230769 1 0.307692308 0.5 0.692307692 8 3 0 10 2R:9167989-9168042 7 8 1069 FBgn0015477 1892.016667 29.22333333 44.74333333 0.004228293 0.27375385 0.178797586 -25 -4 -14.5 0.25 dme-miR-184-3p 6mer2-7 CCGTCC 2R 9178253 9178258 - 2R_9178253_9178258_- 0.491649011 0.758527719 0.625088365 0.188711739 ltd FBtr0346635|FBtr0089932|FBtr0089933|FBtr0339369|FBtr0346636|FBtr0089931|FBtr0089934 9177862|9177862|9177862|9177862|9177862|9177862|9177862 9178433|9178433|9178433|9178433|9178433|9178433|9178433 2R - 9178235 9178282 3'utr ltd FlyBase G21289.1 AGACTTAGTGTCATCCGTATCATCCCGTCCGTCTTTATCTTTAACACC 14 9178260 0.88381296 2 12 133 0.823529412 0.669006781 0.117647059 0.142857143 0.294117647 14 1 2 14 2R:9178235-9178282 6 ltd FBtr0089934|FBtr0346636|FBtr0089931|FBtr0089933|FBtr0339369|FBtr0346635|FBtr0089932 9177862|9177862|9177862|9177862|9177862|9177862|9177862 9178433|9178433|9178433|9178433|9178433|9178433|9178433 CCGTCC 6mer2-7 dme-miR-184-3p 2R - 9178233 9178270 3'utr ltd FlyBase G16143.1 ATCCGTATCATCCCGTCCGTCTTTATCTTTAACACCCC 9 9178260 0.973576267 3 9 59 1 1.176091259 0 0.666666667 0.8 9 0 0 15 2R:9178233-9178270 6 11.5 1070 FBgn0002567 31.33333333 1.753333333 2.75 0.367021277 6.558935361 4.181818182 2 2 2 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2R 9187765 9187770 - 2R_9187765_9187770_- 0.536467846 0.563361972 0.549914909 0.019017071 CG8026 FBtr0088611|FBtr0088611|FBtr0088611|FBtr0302511|FBtr0302511|FBtr0302511 9186668|9186668|9186668|9187361|9187361|9187361 9188013|9188013|9188013|9188013|9188013|9188013 2R - 9187750 9187807 3'utr CG8026 FlyBase G21297.1 TTGTACATCCTTCACTCCCAACTTCGAAAGTAACTGATGTGATCGGGGCGTCGTCAAA 306 9187773 0.790896844 9 289 1571 0.947674419 1.66811956 0.316860465 0.114379085 0.212209302 306 12 6 326 2R:9187750-9187807 6 CG8026 FBtr0302511|FBtr0302511|FBtr0302511|FBtr0088611|FBtr0088611|FBtr0088611 9187361|9187361|9187361|9186668|9186668|9186668 9188013|9188013|9188013|9188013|9188013|9188013 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 9187752 9187808 3'utr CG8026 FlyBase G16151.2 ATTGTACATCCTTCACTCCCAACTTCGAAAGTAACTGATGTGATCGGGGCGTCGTCA 213 9187773 0.771512385 11 196 1074 0.905198777 1.693140461 0.244648318 0.38028169 0.596330275 213 26 5 296 2R:9187752-9187808 6 252.5 1071 FBgn0033391 992.26 57.94 89.16 0.254469595 4.357956507 2.831987438 3 3 3 0.25 dme-miR-980-3p 7mer-A1 GCAGCTA 2R 9187911 9187917 - 2R_9187911_9187917_- 0.777187141 0.777076184 0.777131663 7.84E-05 CG8026 FBtr0088611|FBtr0302511 9186668|9187361 9188013|9188013 2R - 9187817 9188049 stop_codon CG8026 FlyBase G21298.1 ATGGTCATGCTGATCTGGGAGAAGCTGACCAGCTAGATGGAGTATTAGTACTAGATCATCGAATCTGGAATCTGACAGAGAATTTAAGCTAAGCACCTAGAATACACGAATCTTTCTCGTTTCCTCCGATGTGCAGCTAACAGCAGAAAATGACAAACTTATTCTGTATTATTGTTGTAACTCGATTTCGGTTTAGCCCTAGCACCTTACTTTAGCCTTAAGTGTATTCCATA 545 9187920 0.977715505 36 530 3511 0.974151858 2.303196057 0.248788368 0.111926606 0.2180937 545 14 2 603 2R:9187817-9188049 7 CG8026 FBtr0302511|FBtr0088611 9187361|9186668 9188013|9188013 GCAGCTA 7mer-A1 dme-miR-980-3p 2R - 9187826 9188028 stop_codon CG8026 FlyBase G16152.1 AAGCTGACCAGCTAGATGGAGTATTAGTACTAGATCATCGAATCTGGAATCTGACAGAGAATTTAAGCTAAGCACCTAGAATACACGAATCTTTCTCGTTTCCTCCGATGTGCAGCTAACAGCAGAAAATGACAAACTTATTCTGTATTATTGTTGTAACTCGATTTCGGTTTAGCCCTAGCACCTTACTTTAGCCTTAAGTG 389 9187920 0.841531504 25 382 2529 0.98791019 2.280274774 0.27806563 0.375321337 0.580310881 389 5 2 572 2R:9187826-9188028 7 411.5 1072 FBgn0033391 992.26 57.94 89.16 0.414709854 7.102174663 4.61529834 3 3 3 0.25 dme-miR-317-3p 8mer-A1 TGTGTTCA 2R 9204658 9204665 - 2R_9204658_9204665_- 0.625448155 0.624209693 0.624828924 0.000875752 CG8027 FBtr0088609 9204408 9204905 2R - 9204639 9204689 3'utr CG8027 FlyBase G21307.1 CCAGCTTTTGCAGTCGACCTGTTTTGTGTTCAGTTTCATAATATCTAAGTT 59 9204666 0.718233928 9 57 685 0.955223881 1.329058719 0.343283582 0.101694915 0.208955224 59 1 2 64 2R:9204639-9204689 8 CG8027 FBtr0088609 9204408 9204905 TGTGTTCA 8mer-A1 dme-miR-317-3p 2R - 9204640 9204685 3'utr CG8027 FlyBase G16159.1 CTTTTGCAGTCGACCTGTTTTGTGTTCAGTTTCATAATATCTAAGT 47 9204666 0.722405198 6 45 523 0.961538462 1.875061263 0.371794872 0.425531915 0.653846154 47 3 0 75 2R:9204640-9204685 8 52 1073 FBgn0033392 84.66666667 3.863333333 5.83 0.614173228 13.45987921 8.919382504 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 9204863 9204869 - 2R_9204863_9204869_- 0.762366363 0.75327707 0.757821717 0.006427106 CG8027 FBtr0088609|FBtr0088609|FBtr0088609 9204408|9204408|9204408 9204905|9204905|9204905 2R - 9204764 9204943 stop_codon CG8027 FlyBase G21308.1 AGGCGAAGCTGGTGAGGCGCTGTGTGCAGCGCTTGTAGGATCGATTTCGTGAAGTTCTCTCCCTTCTGCAATGTTGTGATATGTTGTGAACATTTATGTAAATTGGCCATTTCTGCAAGCGATCATAGTCAAATCTAGTTGTAGGCCATGTGTAAGGCTATTTTTCTAGTTCTTTAGGTG 57 9204871 0.841418001 22 54 535 0.945945946 1.367976785 0.135135135 0.228070175 0.405405405 57 2 2 70 2R:9204764-9204943 7 CG8027 FBtr0088609|FBtr0088609|FBtr0088609 9204408|9204408|9204408 9204905|9204905|9204905 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 9204850 9204895 3'utr CG8027 FlyBase G16162.1 GTGAAGTTCTCTCCCTTCTGCAATGTTGTGATATGTTGTGAACATT 26 9204871 0.724780626 9 25 265 0.971428571 1.531478917 0.314285714 0.269230769 0.457142857 26 1 0 34 2R:9204850-9204895 7 24 1074 FBgn0033392 84.66666667 3.863333333 5.83 0.283464567 6.212251941 4.116638079 2 2 2 0.25 dme-miR-33-5p 6mer3-8 CAATGC 2R 9209144 9209149 + 2R_9209144_9209149_+ 0.936414972 0.983981584 0.960198278 0.033634665 VhaAC45 FBtr0088588|FBtr0088587 9209104|9209104 9209655|9209774 2R + 9209115 9209163 3'utr VhaAC45 FlyBase G14308.1 ATCATCGGTTCACACCTTATTTGATTGTTCAATGCGCACTCAATATTCA 21 9209135 0.733172323 6 20 189 0.958333333 1.06069784 0.125 0.142857143 0.25 21 0 1 23 2R:9209115-9209163 6 VhaAC45 FBtr0088587|FBtr0088588 9209104|9209104 9209774|9209655 CAATGC 6mer3-8 dme-miR-33-5p 2R + 9209117 9209166 3'utr VhaAC45 FlyBase G10888.1 CATCGGTTCACACCTTATTTGATTGTTCAATGCGCACTCAATATTCATTC 17 9209135 0.680947875 8 14 152 0.727272727 1.204119983 0 0.176470588 0.363636364 17 6 0 16 2R:9209117-9209166 6 16 1075 FBgn0262515 1434.51 91.37 139.18 0.011153634 0.175112181 0.114959046 9 9 9 0.25 dme-miR-92b-3p 6mer3-8 GTGCAA 2R 9209596 9209601 + 2R_9209596_9209601_+ 0.998119398 0.851114975 0.924617186 0.103947808 VhaAC45 FBtr0088588|FBtr0088587 9209104|9209104 9209655|9209774 2R + 9209465 9209621 3'utr VhaAC45 FlyBase G14311.1 GAGCGCGCGCGTGTGTGTGTGTGCACATGGGCAGTAAATCTAATCCGAAGTATATCTAAGTGTTTTATAGTTTCTTGTTTGGCGCAAATATGCGAGACTAATTTATGCCTCTGTATGATAGTTTGTCATTTGTGCAACCCTCCTGTTGTTCGCAGGC 20 9209609 0.985963598 14 17 148 0.92 1.361727836 0.36 0.2 0.36 20 2 0 23 2R:9209465-9209621 6 VhaAC45 FBtr0088587|FBtr0088588 9209104|9209104 9209774|9209655 GTGCAA 6mer3-8 dme-miR-92b-3p 2R + 9209569 9209614 3'utr VhaAC45 FlyBase G10891.1 ATGCCTCTGTATGATAGTTTGTCATTTGTGCAACCCTCCTGTTGTT 7 9209609 0.966486979 4 6 59 0.875 0.84509804 0.125 0.142857143 0.25 7 1 0 7 2R:9209569-9209614 6 5.5 1076 FBgn0262515 1434.51 91.37 139.18 0.003834062 0.060194812 0.039517172 -13 -13 -13 0.25 dme-miR-33-5p 7mer-m8 CAATGCA 2R 9252851 9252857 - 2R_9252851_9252857_- 0.672451559 0.551316744 0.611884152 0.085655309 Pkn FBtr0302604|FBtr0088603|FBtr0301511|FBtr0112897|FBtr0088604|FBtr0088605|FBtr0088601 9252308|9252308|9252308|9252308|9252308|9252308|9252308 9254063|9254063|9254063|9254063|9254063|9254063|9254063 2R - 9252786 9252890 3'utr Pkn FlyBase G21313.1 TGCACACCTCATGCGAATCGAAACGAGTATAAACAATGCAGATCTTCTATTGTCATTTTTATTATGATTATGCTCACAACTTGCGGCTATAATCATCGATTTAAT 21 9252844 0.927473004 10 18 153 0.92 1.06069784 0.28 0.19047619 0.32 21 1 1 23 2R:9252786-9252890 7 Pkn FBtr0112897|FBtr0301511|FBtr0088603|FBtr0302604|FBtr0088605|FBtr0088604|FBtr0088601 9252308|9252308|9252308|9252308|9252308|9252308|9252308 9254063|9254063|9254063|9254063|9254063|9254063|9254063 CAATGCA 7mer-m8 dme-miR-33-5p 2R - 9252830 9252901 3'utr Pkn FlyBase G16164.1 GATAACGATTTTGCACACCTCATGCGAATCGAAACGAGTATAAACAATGCAGATCTTCTATTGTCATTTTTA 21 9252846 0.910310884 7 19 145 0.933333333 1.146128036 0.233333333 0.333333333 0.533333333 21 1 1 28 2R:9252830-9252901 7 13 1077 FBgn0020621 844.8 19.37333333 29.6 0.015388258 0.671025465 0.439189189 -13 -11 -12 0.25 dme-miR-2b-2-5p 6mer2-7 TGAAGA 2R 9288665 9288670 + 2R_9288665_9288670_+ 0.963335295 0.596675341 0.780005318 0.259267772 CG1968 FBtr0088596 9287961 9289026 2R + 9288631 9288692 3'utr CG1968 FlyBase G14320.1 CAGAGCAATCAATCTAAAATAGAAACAAACCTGCTGAAGATCTTCATGTCCAAGATGGACGC 16 9288677 0.975950883 6 13 82 0.909090909 1.301029996 0.272727273 0.25 0.454545455 16 2 0 20 2R:9288631-9288692 6 CG1968 FBtr0088596 9287961 9289026 TGAAGA 6mer2-7 dme-miR-2b-2-5p 2R + 9288657 9288712 3'utr CG1968 FlyBase G10898.1 AAACCTGCTGAAGATCTTCATGTCCAAGATGGACGCCTTTCTGGAACTACCCGATG 12 9288676 0.976448332 6 11 73 1 1.204119983 0.4375 0.333333333 0.5 12 0 0 16 2R:9288657-9288712 6 11.5 1078 FBgn0033401 141.2733333 8.553333333 13.19 0.081402482 1.344505066 0.871872631 -12 -11 -11.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 9303235 9303240 - 2R_9303235_9303240_- 0.450131416 0.777359825 0.61374562 0.231385421 Myd88 FBtr0333000|FBtr0333000|FBtr0333000 9302821|9302821|9302821 9303893|9303893|9303893 2R - 9303192 9303324 3'utr Myd88 FlyBase G21341.1 AAACTGTTTGTTCTCGGTACCGCCATCGGCTGGTTGCCTCATGTGATTAGCTCTAGCCTAGCTGTTACCGATTGTTACTGATTGCTGTGAATGCGTGCCCATATGCCTGATGTGCACCTAAGCACACTCACTT 36 9303243 0.981150772 15 36 278 1 1.672097858 0.404255319 0.277777778 0.446808511 36 0 0 47 2R:9303192-9303324 6 Myd88 FBtr0333000|FBtr0333000|FBtr0333000 9302821|9302821|9302821 9303893|9303893|9303893 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 9303196 9303298 3'utr Myd88 FlyBase G16183.1 CGGCTGGTTGCCTCATGTGATTAGCTCTAGCCTAGCTGTTACCGATTGTTACTGATTGCTGTGAATGCGTGCCCATATGCCTGATGTGCACCTAAGCACACTC 27 9303242 0.982483805 10 27 205 1 1.579783597 0.421052632 0.296296296 0.5 27 0 0 38 2R:9303196-9303298 6 14.5 1079 FBgn0033402 1078.95 50.21333333 77.45 0.013438992 0.288767924 0.18721756 3 2 2.5 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2R 9396443 9396448 - 2R_9396443_9396448_- 0.929153518 0.988683207 0.958918363 0.042093855 Non1 FBtr0300649|FBtr0088554 9396263|9396358 9396478|9396478 2R - 9396446 9396537 stop_codon Non1 FlyBase G21352.1 AGATGCCGAAGCATTTGTTCTCCGGCAAGCGTGGAAATGGCAAGACGGATCGCCGTTAAGCGCCGCAGCCTTGGCTGGTTAAGTGATTCTAC 31 9396459 0.855264097 10 30 193 0.970588235 1.217483944 0.117647059 0.096774194 0.176470588 31 0 1 33 2R:9396446-9396537 2 Non1 FBtr0300649|FBtr0088554 9396263|9396358 9396478|9396478 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2R - 9396446 9396479 stop_codon Non1 FlyBase G16193.1 AGCGCCGCAGCCTTGGCTGGTTAAGTGATTCTAC 19 9396459 0.939739857 4 15 127 0.826086957 0.67669361 0.173913043 0.157894737 0.304347826 19 1 3 19 2R:9396446-9396479 2 16 1080 FBgn0028473 3601.33 199.31 303.37 0.004442803 0.080276955 0.052740877 11 11 11 0.25 dme-miR-12-5p 6mer2-7 ATACTC 2R 9433770 9433775 + 2R_9433770_9433775_+ 0.997707148 0.933157337 0.965432243 0.045643601 Pdk FBtr0306807 9433272 9433952 2R + 9433750 9433863 3'utr Pdk FlyBase G14340.1 TATATACACGACAAACATTTATACTCTGAAGTAAACTGATGTTTTGAAACATTTACGAAATTAGCTTTAATTTGTGGATTTTAATTAGGCTAAAGCCCGAACTGCATGCAATGT 27 9433769 0.972947757 13 27 167 1 1.531478917 0.235294118 0.259259259 0.411764706 27 0 0 34 2R:9433750-9433863 6 Pdk FBtr0306807 9433272 9433952 ATACTC 6mer2-7 dme-miR-12-5p 2R + 9433746 9433782 3'utr Pdk FlyBase G10917.1 AACCTATATACACGACAAACATTTATACTCTGAAGTA 5 9433769 0.963316101 4 4 22 1 0.77815125 0.666666667 0.2 0.333333333 5 0 0 6 2R:9433746-9433782 6 7 1081 FBgn0017558 322.33 15.26666667 23.27333333 0.021716874 0.458515284 0.300773417 1 1 1 0.25 dme-miR-1003-3p 8mer-A1 ATGTGAGA 2R 9434853 9434860 - 2R_9434853_9434860_- 0.639340775 0.639274117 0.639307446 4.72E-05 ced-6 FBtr0306808|FBtr0088549|FBtr0088548|FBtr0088550|FBtr0339384 9434667|9434667|9434667|9434667|9434667 9435274|9435274|9435274|9435274|9435274 2R - 9434684 9434998 3'utr ced-6 FlyBase G21372.1 AGAAACAACCGCAATGCACCTTGTTTAAACGTATCAATTTGTTGCTGTAGTTGAATAGATTAATTGATGGTCGAGTAAAGCGAATGAAAAAATGTTAACAAGTGATAAATGTGAAAATTGCTAAACAATGCTAACTGAATGTGAGAATTTTGTATAAAATAATTATAAAGACATAACCAGAAGCAAATGAATCGATTACTGTATAGAGCCGAAATACGAGGAGAATTAAAGCAAAATGAACAATATTTAATGTTATTGATGCAATATAGAGAAATATTATTATTACTATTATTATTGTGTACGTAAAGAATAAAA 201 9434864 0.976622056 49 190 1321 0.948207171 2.376576957 0.151394422 0.208955224 0.366533865 201 13 0 238 2R:9434684-9434998 8 ced-6 FBtr0339384|FBtr0088550|FBtr0088548|FBtr0088549|FBtr0306808 9434667|9434667|9434667|9434667|9434667 9435274|9435274|9435274|9435274|9435274 ATGTGAGA 8mer-A1 dme-miR-1003-3p 2R - 9434718 9435033 3'utr ced-6 FlyBase G16210.1 TGATAATAATCTGAGGTCAAGATCAAAAGAACACAAGAAACAACCGCAATGCACCTTGTTTAAACGTATCAATTTGTTGCTGTAGTTGAATAGATTAATTGATGGTCGAGTAAAGCGAATGAAAAAATGTTAACAAGTGATAAATGTGAAAATTGCTAAACAATGCTAACTGAATGTGAGAATTTTGTATAAAATAATTATAAAGACATAACCAGAAGCAAATGAATCGATTACTGTATAGAGCCGAAATACGAGGAGAATTAAAGCAAAATGAACAATATTTAATGTTATTGATGCAATATAGAGAAATATTATT 155 9434869 0.977406578 47 140 923 0.916317992 1.86332286 0.209205021 0.393548387 0.606694561 155 18 2 219 2R:9434718-9435033 8 67.5 1082 FBgn0029092 3414.266667 169.59 258.2733333 0.019769985 0.398018751 0.261351023 4 9 6.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 9478158 9478164 + 2R_9478158_9478164_+ 0.500065461 0.376863148 0.438464305 0.087117252 Camta FBtr0339381 9477617 9480076 2R + 9478117 9478210 3'utr Camta FlyBase G14347.1 ATAGTTACATTTGTATATAGATATTGCCTAACTAACTAAATTCTAGTCTATTTTAACGTACTACCAAGCTCTGCGATGCGACTAAGCTTGTCTC 52 9478157 0.986191193 11 51 435 0.984848485 1.812913357 0.03030303 0.211538462 0.378787879 52 1 0 65 2R:9478117-9478210 7 Camta FBtr0339381 9477617 9480076 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 9478144 9478199 3'utr Camta FlyBase G10923.1 CTAACTAACTAAATTCTAGTCTATTTTAACGTACTACCAAGCTCTGCGATGCGACT 35 9478157 0.877909453 4 35 240 1 1.707570176 0.019607843 0.314285714 0.529411765 35 0 0 51 2R:9478144-9478199 7 31 1083 FBgn0259234 576.11 9.96 15.38666667 0.053809168 3.112449799 2.014731369 1 1 1 0.25 dme-miR-184-3p 8mer-A1 TCCGTCCA 2R 9478755 9478762 + 2R_9478755_9478762_+ 0.629289307 0.630810742 0.630050024 0.001075792 Camta FBtr0339381 9477617 9480076 2R + 9478746 9478789 3'utr Camta FlyBase G14349.1 TTATTTTTGTCCGTCCACATTGTTAGCTTTCATAACATACCAAC 6 9478751 0.990542169 4 4 50 0.875 0.84509804 0.25 0.166666667 0.375 6 1 0 7 2R:9478746-9478789 8 Camta FBtr0339381 9477617 9480076 TCCGTCCA 8mer-A1 dme-miR-184-3p 2R + 9478743 9478780 3'utr Camta FlyBase G10924.1 AAATTATTTTTGTCCGTCCACATTGTTAGCTTTCATAA 6 9478751 0.670195448 4 5 63 1 1 0.2 0.5 0.7 6 0 0 10 2R:9478743-9478780 8 5 1084 FBgn0259234 576.11 9.96 15.38666667 0.008678898 0.502008032 0.324956672 4 4 4 0.25 dme-bantam-3p 6mer3-8 TGATCT 2R 9567052 9567057 - 2R_9567052_9567057_- 0.992349967 0.995476105 0.993913036 0.002210487 Not1 FBtr0304957 9566144 9567977 2R - 9566889 9567095 3'utr Not1 FlyBase G21398.1 AGCAGCCACTGCAACATTAACCAGAACCAACCAATGTTTGATCTTCTTATACGCAATATAAGCGATACGTTTTGTTTTAACCTACATTATTTTATGAACTGATTATTAACTGAAATGGAAATACATTGAACACATCTAGCTTGTTAAACGTATAATCGATCCTCCATGTAAAGATAAACGCTGTTAGAATCAGATAGATGAGTGAAT 152 9567049 0.875676875 42 137 1205 0.90052356 1.457377197 0.120418848 0.230263158 0.387434555 152 14 5 172 2R:9566889-9567095 6 Not1 FBtr0304957 9566144 9567977 TGATCT 6mer3-8 dme-bantam-3p 2R - 9567018 9567092 3'utr Not1 FlyBase G16239.1 AGCCACTGCAACATTAACCAGAACCAACCAATGTTTGATCTTCTTATACGCAATATAAGCGATACGTTTTGTTTT 56 9567058 0.934499158 12 54 454 0.9625 1.886490725 0.0625 0.267857143 0.4875 56 3 0 77 2R:9567018-9567092 6 54 1085 FBgn0085436 10306.14667 124.2833333 191.6566667 0.005239592 0.434491082 0.281753831 -8 1 -3.5 0.25 dme-miR-2a-2-5p 7mer-m1 GATGAGG 2R 9567289 9567295 - 2R_9567289_9567295_- 0.825505965 0.821559977 0.823532971 0.002790243 Not1 FBtr0304957 9566144 9567977 2R - 9567239 9567348 3'utr Not1 FlyBase G21400.1 CAAACCTACTCTCAACGCCGCTGAGAGCGATATTTATAGACGGTGAGCATGAGGATGAGGAGAGGAGGAGAAGGAGAAGCCGAGCAGAATGTTGAAAAGATCCTCAAGTC 18 9567313 0.934861369 11 18 65 1 1.278753601 0.473684211 0.055555556 0.105263158 18 0 0 19 2R:9567239-9567348 7 Not1 FBtr0304957 9566144 9567977 GATGAGG 7mer-m1 dme-miR-2a-2-5p 2R - 9567275 9567313 3'utr Not1 FlyBase G16240.1 ATAGACGGTGAGCATGAGGATGAGGAGAGGAGGAGAAGG 5 9567299 0.868858911 3 4 11 0.7 0.84509804 0 0.6 0.8 5 3 0 7 2R:9567275-9567313 7 6 1086 FBgn0085436 10306.14667 124.2833333 191.6566667 0.000582177 0.048276787 0.031305981 18 4 11 0.25 dme-miR-980-3p 6mer3-8 GGCAGC 2R 9567902 9567907 - 2R_9567902_9567907_- 0.857890232 0.882965811 0.870428022 0.017731127 Not1 FBtr0339394|FBtr0112672|FBtr0112673|FBtr0112674|FBtr0304957 9567512|9567512|9567512|9567512|9566144 9567977|9567977|9567977|9567977|9567977 2R - 9567892 9567930 3'utr Not1 FlyBase G21404.1 CAGACGCAGGCAGTAGCTGCCTGGGCAGCACACCACCAC 11 9567912 0.799303279 3 11 22 1 1.079181246 0.416666667 0.090909091 0.166666667 11 0 0 12 2R:9567892-9567930 6 Not1 FBtr0112672|FBtr0112673|FBtr0112674|FBtr0304957|FBtr0339394 9567512|9567512|9567512|9566144|9567512 9567977|9567977|9567977|9567977|9567977 GGCAGC 6mer3-8 dme-miR-980-3p 2R - 9567901 9567931 3'utr Not1 FlyBase G16244.1 CCAGACGCAGGCAGTAGCTGCCTGGGCAGCA 6 9567910 0.7967343 2 6 12 1 0.954242509 0.111111111 0.333333333 0.555555556 6 0 0 9 2R:9567901-9567931 6 8.5 1087 FBgn0085436 10306.14667 124.2833333 191.6566667 0.000824751 0.068392115 0.04435014 5 3 4 0.25 dme-miR-12-5p 6mer2-7 ATACTC 2R 9592424 9592429 + 2R_9592424_9592429_+ 0.878881667 0.989630106 0.934255886 0.078310945 Map60 FBtr0088530 9592414 9592744 2R + 9592373 9592472 stop_codon Map60 FlyBase G14377.1 GCGCGCCATCCTCGATGTGCAGAGCGACGAACTGGAGCAGTAGACCGACTGATACTCGCAATTTAAATGATTACTCAGCTTACTTATTAGACAAACTAAA 199 9592440 0.729808618 12 188 1148 0.946280992 1.757775491 0.02892562 0.201005025 0.342975207 199 10 3 229 2R:9592373-9592472 6 Map60 FBtr0088530 9592414 9592744 ATACTC 6mer2-7 dme-miR-12-5p 2R + 9592358 9592470 stop_codon Map60 FlyBase G10943.1 GGAGCTGTCCATCTTGCGCGCCATCCTCGATGTGCAGAGCGACGAACTGGAGCAGTAGACCGACTGATACTCGCAATTTAAATGATTACTCAGCTTACTTATTAGACAAACTA 124 9592423 0.970740122 15 117 674 0.956043956 1.763427994 0.098901099 0.338709677 0.549450549 124 6 2 174 2R:9592358-9592470 6 107.5 1088 FBgn0010342 1158.76 77.84 119.11 0.092771583 1.381038027 0.902527076 -16 1 -7.5 0.25 dme-miR-305-3p 7mer-m1 TGTGCCG 2R 9592554 9592560 + 2R_9592554_9592560_+ 0.813560131 0.8239688 0.818764466 0.007360062 Map60 FBtr0088530 9592414 9592744 2R + 9592516 9592575 3'utr Map60 FlyBase G14378.1 TATCGTATTATTTTTTCCGTGTTCAAACGTCTGCGTTCTGTGCCGCCCACTTGTAAAATG 59 9592556 0.982674582 8 55 412 0.924242424 1.183269844 0.333333333 0.084745763 0.181818182 59 2 3 61 2R:9592516-9592575 7 Map60 FBtr0088530 9592414 9592744 TGTGCCG 7mer-m1 dme-miR-305-3p 2R + 9592528 9592579 3'utr Map60 FlyBase G10944.1 TTTTCCGTGTTCAAACGTCTGCGTTCTGTGCCGCCCACTTGTAAAATGTATT 56 9592555 0.783456265 9 50 383 0.840909091 1.392110465 0.238636364 0.392857143 0.613636364 56 12 2 74 2R:9592528-9592579 7 55 1089 FBgn0010342 1158.76 77.84 119.11 0.047464531 0.706577595 0.461758039 -2 -1 -1.5 0.25 dme-miR-317-3p 7mer-A1 GTGTTCA 2R 9592600 9592606 + 2R_9592600_9592606_+ 0.781816829 0.819994963 0.800905896 0.026996064 Map60 FBtr0088530 9592414 9592744 2R + 9592586 9592621 3'utr Map60 FlyBase G14379.1 CAGTTCTGGTATGAGTGTTCATAGCATTTACGCATG 12 9592597 0.805680015 3 12 103 1 1.113943352 0.307692308 0.083333333 0.153846154 12 0 0 13 2R:9592586-9592621 7 Map60 FBtr0088530 9592414 9592744 GTGTTCA 7mer-A1 dme-miR-317-3p 2R + 9592585 9592619 3'utr Map60 FlyBase G10945.1 ACAGTTCTGGTATGAGTGTTCATAGCATTTACGCA 6 9592596 0.714644962 3 4 42 0.6 0.954242509 0.133333333 1 1 6 6 0 9 2R:9592585-9592619 7 8.5 1090 FBgn0010342 1158.76 77.84 119.11 0.007335428 0.109198356 0.071362606 3 4 3.5 0.25 dme-miR-1002-5p 6mer3-8 CTACTT 2R 9592697 9592702 + 2R_9592697_9592702_+ 0.897718444 0.933510192 0.915614318 0.025308624 Map60 FBtr0088530 9592414 9592744 2R + 9592642 9592709 3'utr Map60 FlyBase G14380.1 AATGTATTTCTAATATTTGAGATTTCGAATTTGTCCCTATTTAAGGTTGAATATGCTACTTGATTTTA 13 9592694 0.989261666 7 12 127 0.941176471 1.204119983 0.058823529 0.230769231 0.411764706 13 1 0 16 2R:9592642-9592709 6 Map60 FBtr0088530 9592414 9592744 CTACTT 6mer3-8 dme-miR-1002-5p 2R + 9592643 9592713 3'utr Map60 FlyBase G10945.2 ATGTATTTCTAATATTTGAGATTTCGAATTTGTCCCTATTTAAGGTTGAATATGCTACTTGATTTTAAAAT 11 9592693 0.989272958 10 10 91 0.882352941 1.176091259 0 0.363636364 0.588235294 11 2 0 15 2R:9592643-9592713 6 6 1091 FBgn0010342 1158.76 77.84 119.11 0.005177949 0.077081192 0.050373604 3 4 3.5 0.25 dme-miR-277-3p 7mer-m8 TGCATTT 2R 9605313 9605319 + 2R_9605313_9605319_+ 0.3542875 0.395118384 0.374702942 0.028871806 CG1902 FBtr0088531|FBtr0088532 9604941|9604941 9605624|9605624 2R + 9605263 9605331 3'utr CG1902 FlyBase G14388.2 TACACATTCTAACGTCCGGTCGAACGATTCATTCTACCATGATCCCATAATGCATTTTCATGATGAAAT 16 9605310 0.848544397 7 14 91 0.882352941 1.176091259 0.235294118 0.0625 0.117647059 16 2 0 15 2R:9605263-9605331 7 CG1902 FBtr0088531|FBtr0088532 9604941|9604941 9605624|9605624 TGCATTT 7mer-m8 dme-miR-277-3p 2R + 9605288 9605314 3'utr CG1902 FlyBase G10949.1 GATTCATTCTACCATGATCCCATAATG 7 9605310 0.695002709 2 5 40 0.888888889 0.903089987 0.333333333 0.285714286 0.444444444 7 1 0 8 2R:9605288-9605314 2 6 1092 FBgn0033434 795.9833333 54.22333333 82.71333333 0.007537846 0.11065347 0.072539695 3 3 3 0.25 dme-miR-277-3p 7mer-m8 TGCATTT 2R 9688649 9688655 - 2R_9688649_9688655_- 0.620101306 0.608448317 0.614274812 0.008239915 Uba1 FBtr0339517|FBtr0088499 9688287|9688287 9688767|9688767 2R - 9688527 9688676 3'utr Uba1 FlyBase G21476.2 AGGAGTTACTGTCTAGCTGTTTGCATTTTAATTTTCACAACACCATTACGAGAGCAGCCCAGATCTAGAAATTATATAAAATGTGTGTGAATCCTCTAAGGAATGGCAAAATAATACGCATCATACGAAATACAAAGACTCGACTAAAAG 33 9688656 0.978934507 14 30 218 0.923076923 1.079181246 0.153846154 0.181818182 0.307692308 33 1 2 36 2R:9688527-9688676 7 Uba1 FBtr0339517|FBtr0088499 9688287|9688287 9688767|9688767 TGCATTT 7mer-m8 dme-miR-277-3p 2R - 9688569 9688727 3'utr Uba1 FlyBase G16298.1 GATCCCGTTTTGTTGTCGGCGACGCGTTTTGGAATCGCGCAGCTCCAACGAAGGAGTTACTGTCTAGCTGTTTGCATTTTAATTTTCACAACACCATTACGAGAGCAGCCCAGATCTAGAAATTATATAAAATGTGTGTGAATCCTCTAAGGAATGGCA 27 9688655 0.984298163 15 24 194 0.909090909 1.602059991 0.25 0.481481481 0.681818182 27 4 0 40 2R:9688569-9688727 7 9.5 1093 FBgn0023143 3506.563333 97.42 149.3233333 0.002709205 0.09751591 0.063620332 1 0 0.5 0.25 dme-bantam-3p 7mer-m8 TGATCTC 2R 9715858 9715864 + 2R_9715858_9715864_+ 0.66160092 0.661614609 0.661607764 9.69E-06 dap FBtr0088469 9715082 9716256 2R + 9715780 9715955 3'utr dap FlyBase G14412.1 TGAATGCCGCCGAATGGACACAAATTGTCGCGCTCTCATTTCTTAACCAGTGCTAAAAATGTCTTTTATGATTTGCTATGATCTCTGGGCAAATTATGAAAACAATTTTGCCTGAAACTATCATGTACAAAAACTAGATTATTATACATACTATACACATAGGCAGAGCCTATTCT 1243 9715858 0.984773314 31 1202 9666 0.966003849 1.922552467 0.050032072 0.201930813 0.363694676 1243 36 17 1506 2R:9715780-9715955 7 dap FBtr0088469 9715082 9716256 TGATCTC 7mer-m8 dme-bantam-3p 2R + 9715780 9715926 3'utr dap FlyBase G10962.1 TGAATGCCGCCGAATGGACACAAATTGTCGCGCTCTCATTTCTTAACCAGTGCTAAAAATGTCTTTTATGATTTGCTATGATCTCTGGGCAAATTATGAAAACAATTTTGCCTGAAACTATCATGTACAAAAACTAGATTATTATAC 818 9715858 0.941397623 28 782 6291 0.955028618 2.026050158 0.061324612 0.376528117 0.582992641 818 45 10 1168 2R:9715780-9715926 7 930 1094 FBgn0010316 804.5033333 38.63 59.20333333 1.155992724 24.07455346 15.70857497 0 0 0 0.25 dme-miR-8-3p 6mer2-7 AGTATT 2R 9716011 9716016 + 2R_9716011_9716016_+ 0.73801043 0.752820685 0.745415558 0.010472464 dap FBtr0088469 9715082 9716256 2R + 9715986 9716053 3'utr dap FlyBase G14413.1 AAGGCCTAACTAAGAACAAATCCAAAGTATTCTCCTAATATTTATATGTATAGACACTCTATGTATAA 30 9716014 0.942748006 7 29 168 0.96875 1.491361694 0.03125 0.066666667 0.125 30 1 0 31 2R:9715986-9716053 6 dap FBtr0088469 9715082 9716256 AGTATT 6mer2-7 dme-miR-8-3p 2R + 9715982 9716029 3'utr dap FlyBase G10963.1 TTGTAAGGCCTAACTAAGAACAAATCCAAAGTATTCTCCTAATATTTA 21 9716014 0.968472255 7 19 106 0.862068966 0.920818754 0 0.285714286 0.482758621 21 2 2 25 2R:9715982-9716029 6 21.5 1095 FBgn0010316 804.5033333 38.63 59.20333333 0.026724563 0.556562257 0.363155228 -3 -3 -3 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2R 9845106 9845112 + 2R_9845106_9845112_+ 0.634853619 0.575022471 0.604938045 0.042306977 CG1667 FBtr0345019|FBtr0345020 9845083|9845083 9845512|9845512 2R + 9845001 9845170 stop_codon CG1667 FlyBase G14436.1 AAGGGCAACCTGGTGGATGTTGGCGAATTGCTTGTAGCTCATATGCAAAACAAAACCAAAACTATTGACGAAATTTCCAACTAAGACTTGAAATCAAAAACGATTCCAAAGATTACGTTTTTTAATAATATATATCTATATATTGTAGTAATACCAAATTATTCTAGTTT 156 9845104 0.857336545 20 148 830 0.952631579 1.78055732 0.036842105 0.198717949 0.342105263 156 7 2 181 2R:9845001-9845170 7 CG1667 FBtr0345019|FBtr0345020 9845083|9845083 9845512|9845512 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 9844999 9845127 stop_codon CG1667 FlyBase G10980.1 GCAAGGGCAACCTGGTGGATGTTGGCGAATTGCTTGTAGCTCATATGCAAAACAAAACCAAAACTATTGACGAAATTTCCAACTAAGACTTGAAATCAAAAACGATTCCAAAGATTACGTTTTTTAATA 107 9845104 0.95303902 15 105 488 0.97515528 2.195899652 0.043478261 0.345794393 0.565217391 107 4 0 157 2R:9844999-9845127 7 83 1096 FBgn0033453 439.85 39.39 60.12 0.188700693 2.10713379 1.380572189 2 2 2 0.25 dme-miR-1012-3p 6mer2-7 TGACTA 2R 9877042 9877047 - 2R_9877042_9877047_- 0.7200854 0.840909109 0.780497255 0.085435258 Sec24AB FBtr0339406|FBtr0088451|FBtr0339407 9876230|9876230|9876230 9877125|9877125|9877125 2R - 9876985 9877145 stop_codon Sec24AB FlyBase G21539.1 TTCGGGCTCAGGTTAAATAGTATATAAGCAGGATATCCTACCACTATTGTATGCAGCATAAATACGAGTTTCTAAGAACCTAAAAACTCAGACTCTGGTGACTAGAAGCACGAAGCGAATGCAGGTGACACTGGTGCGAAACAATGGAGACCAGTTCGGGA 45 9877050 0.997688203 14 44 226 0.980392157 1.698970004 0.078431373 0.133333333 0.235294118 45 1 0 50 2R:9876985-9877145 6 Sec24AB FBtr0339407|FBtr0088451|FBtr0339406 9876230|9876230|9876230 9877125|9877125|9877125 TGACTA 6mer2-7 dme-miR-1012-3p 2R - 9877003 9877122 3'utr Sec24AB FlyBase G16352.1 ATAAGCAGGATATCCTACCACTATTGTATGCAGCATAAATACGAGTTTCTAAGAACCTAAAAACTCAGACTCTGGTGACTAGAAGCACGAAGCGAATGCAGGTGACACTGGTGCGAAACA 39 9877050 0.865125135 13 36 188 0.966666667 1.763427994 0.15 0.358974359 0.583333333 39 2 0 58 2R:9877003-9877122 6 17.5 1097 FBgn0033460 661.8766667 16.61 25.35 0.026439971 1.053582179 0.690335306 3 3 3 0.25 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 9962909 9962915 + 2R_9962909_9962915_+ 0.660895459 0.661610848 0.661253154 0.000505793 Pal1 FBtr0339422 9962739 9963031 2R + 9962864 9962930 3'utr Pal1 FlyBase G14481.1 ACGCTTTTTTTGGTGTCGTTAATTACACAGCATGTCCACTTCTTGTGTGTTCTGTATTCGTTGGCTT 14 9962916 0.659987744 6 13 153 0.944444444 1.230448921 0.055555556 0.142857143 0.333333333 14 1 0 17 2R:9962864-9962930 7 Pal1 FBtr0339422 9962739 9963031 TGTGTTC 7mer-m8 dme-miR-317-3p 2R + 9962890 9962948 3'utr Pal1 FlyBase G11012.1 ACAGCATGTCCACTTCTTGTGTGTTCTGTATTCGTTGGCTTACTTTTCGTTCAACTTTA 17 9962907 0.992088512 7 14 165 1 1.397940009 0 0.352941176 0.56 17 0 0 25 2R:9962890-9962948 7 11 1098 FBgn0033466 329.6666667 20.27 30.62666667 0.033367037 0.542673902 0.359164127 -7 2 -2.5 0.25 dme-miR-79-3p 7mer-A1 AGCTTTA 3L 10220719 10220725 - 3L_10220719_10220725_- 0.805345024 0.633994834 0.719669929 0.121162888 scramb1 FBtr0076301|FBtr0076303|FBtr0076302 10220483|10220483|10220481 10221072|10221072|10221072 3L - 10220711 10220742 3'utr scramb1 FlyBase G35928.1 GTATTCAACGACAAATCAGCTTTATTTATGAA 8 10220727 0.970590523 2 8 50 1 1.041392685 0.181818182 0.25 0.454545455 8 0 0 11 3L:10220711-10220742 7 scramb1 FBtr0076302|FBtr0076303|FBtr0076301 10220481|10220483|10220483 10221072|10221072|10221072 AGCTTTA 7mer-A1 dme-miR-79-3p 3L - 10220706 10220758 3'utr scramb1 FlyBase G27181.1 CAATTACTTGTGTAAAGTATTCAACGACAAATCAGCTTTATTTATGAATTTTG 14 10220727 0.962669746 4 13 102 1 1.278753601 0.157894737 0.214285714 0.421052632 14 0 0 19 3L:10220706-10220758 7 10 1099 FBgn0052056 455.3333333 27.11666667 41.42333333 0.021961933 0.36877689 0.241409833 2 2 2 0.25 dme-miR-7-5p 6mer3-8 GTCTTC 3L 10220909 10220914 - 3L_10220909_10220914_- 0.948288009 0.982067206 0.965177608 0.023885501 scramb1 FBtr0076301|FBtr0076303|FBtr0076302 10220483|10220483|10220481 10221072|10221072|10221072 3L - 10220890 10220952 3'utr scramb1 FlyBase G35930.1 TTTATCCAAATATCTTCCCGGTGAACTGTCGCGTACTAGTCTTCTGTACCAAATGCTTATTGA 34 10220911 0.709349063 7 31 253 0.976744186 1.62324929 0.139534884 0.264705882 0.418604651 34 1 0 42 3L:10220890-10220952 6 scramb1 FBtr0076302|FBtr0076303|FBtr0076301 10220481|10220483|10220483 10221072|10221072|10221072 GTCTTC 6mer3-8 dme-miR-7-5p 3L - 10220894 10220944 3'utr scramb1 FlyBase G27183.1 AATATCTTCCCGGTGAACTGTCGCGTACTAGTCTTCTGTACCAAATGCTTA 27 10220910 0.969422433 3 27 207 1 1.662757832 0.173913043 0.444444444 0.673913043 27 0 0 46 3L:10220894-10220944 6 27 1100 FBgn0052056 455.3333333 27.11666667 41.42333333 0.059297218 0.995697603 0.65180655 -3 -4 -3.5 0.25 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 10591542 10591549 + 3L_10591542_10591549_+ 0.668353857 0.668241993 0.668297925 7.91E-05 A2bp1 FBtr0305093|FBtr0305096|FBtr0332985|FBtr0305095 10590564|10590564|10590564|10590564 10593403|10593403|10594012|10594012 3L + 10591502 10591688 5'utr A2bp1 FlyBase G29412.1 AATGCATTGCTTGGTTGTTCCTAATAATTTTATATATTTTGGCAGCTAAAACCACTCACACTCAACTCACGACTCAATTCGAATTGCTCAAAAAAAAATCGTAGCGCATAGGTAAATGCAAAAGATCAACACGTAGACATATCCTTGGAATATACAATAATATTTACTTTAAATGCCGCCATAGCAG 121 10591541 0.983832149 19 112 862 0.927631579 1.848189117 0.019736842 0.214876033 0.375 121 10 1 141 3L:10591502-10591688 8 A2bp1 FBtr0305095|FBtr0332985|FBtr0305096|FBtr0305093 10590564|10590564|10590564|10590564 10594012|10594012|10593403|10593403 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L + 10591502 10591564 5'utr A2bp1 FlyBase G22256.1 AATGCATTGCTTGGTTGTTCCTAATAATTTTATATATTTTGGCAGCTAAAACCACTCACACTC 74 10591541 0.769587865 12 67 530 0.919191919 1.658011397 0 0.256756757 0.444444444 74 7 1 91 3L:10591502-10591564 8 82.5 1101 FBgn0052062 354.2866667 11.58666667 17.8 0.232862277 7.120253165 4.634831461 1 1 1 0.25 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 10592110 10592117 + 3L_10592110_10592117_+ 0.668148644 0.668338814 0.668243729 0.000134492 A2bp1 FBtr0305093|FBtr0305096|FBtr0332985|FBtr0305095 10590564|10590564|10590564|10590564 10593403|10593403|10594012|10594012 3L + 10592071 10592136 5'utr A2bp1 FlyBase G29413.1 ATGCTCAATGGAAAATAAGCGAACAAACTTTGATTCTTAGGCAGCTACTGTCGTCAAATTTAAACT 76 10592108 0.988454678 11 69 628 0.913978495 1.327358934 0.161290323 0.197368421 0.344086022 76 5 3 85 3L:10592071-10592136 8 A2bp1 FBtr0305095|FBtr0332985|FBtr0305096|FBtr0305093 10590564|10590564|10590564|10590564 10594012|10594012|10593403|10593403 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L + 10592087 10592133 5'utr A2bp1 FlyBase G22258.1 AAGCGAACAAACTTTGATTCTTAGGCAGCTACTGTCGTCAAATTTAA 56 10592108 0.800372247 9 51 483 0.93258427 1.618048097 0.247191011 0.428571429 0.640449438 56 5 1 83 3L:10592087-10592133 8 65 1102 FBgn0052062 354.2866667 11.58666667 17.8 0.183467249 5.609896433 3.651685393 2 2 2 0.25 dme-miR-283-5p 8mer-m1 TGATATTT 3L 10664398 10664405 + 3L_10664398_10664405_+ 0.534723121 0.546710986 0.540717054 0.008476725 CG32068 FBtr0113421 10664364 10664435 3L + 10664374 10664433 3'utr CG32068 FlyBase G29436.1 AATCTTATCTTTTACCATCAAGTTTGATATTTTGAAATATAAAATCGCTGTGTATAATCA 21 10664397 0.793768151 8 20 189 0.96 1.380211242 0.2 0.095238095 0.24 21 1 0 24 3L:10664374-10664433 8 CG32068 FBtr0113421 10664364 10664435 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 10664382 10664415 3'utr CG32068 FlyBase G22277.1 CTTTTACCATCAAGTTTGATATTTTGAAATATAA 8 10664397 0.757373083 3 6 72 0.818181818 0.954242509 0.090909091 0.375 0.545454545 8 2 0 9 3L:10664382-10664415 8 10 1103 FBgn0052068 230.5566667 42.00666667 63.54666667 0.043373285 0.238057451 0.157364666 1 1 1 0.25 dme-miR-79-3p 6mer3-8 TAGCTT 3L 10875278 10875283 + 3L_10875278_10875283_+ 0.988522631 0.998798412 0.993660521 0.007266088 tna FBtr0076268|FBtr0301658 10874466|10874466 10875743|10876496 3L + 10875198 10875297 5'utr tna FlyBase G29492.1 AATGAAAACATTTACATTTTAATTGTTGCATAATTTTAATTATTTTTTAAAGCCTATCTACATATTAAAAGTAAATGATTTAGCTTGGTAAACGATAAAC 25 10875277 0.981358984 9 25 190 1 1.477121255 0.2 0.2 0.333333333 25 0 0 30 3L:10875198-10875297 6 tna FBtr0301658|FBtr0076268 10874466|10874466 10876496|10875743 TAGCTT 6mer3-8 dme-miR-79-3p 3L + 10875261 10875291 5'utr tna FlyBase G22317.1 ATTAAAAGTAAATGATTTAGCTTGGTAAACG 15 10875277 0.642842143 4 15 96 1 1.397940009 0.4 0.466666667 0.68 15 0 0 25 3L:10875261-10875291 6 17 1104 FBgn0026160 929.45 23.40666667 36.18333333 0.018290387 0.726288807 0.469829572 1 1 1 0.25 dme-miR-968-5p 6mer3-8 ACTACT 3L 10895162 10895167 - 3L_10895162_10895167_- 0.866756521 0.999889724 0.933323122 0.094139389 Aps FBtr0076250|FBtr0076252 10894774|10894774 10896130|10896130 3L - 10895138 10895181 3'utr Aps FlyBase G35980.1 TATGAACTAATTCAACTACTAAGATACGTGCACGTTGTACTTTT 5 10895164 0.987905902 4 4 36 0.833333333 0.698970004 0 0.2 0.333333333 5 1 0 5 3L:10895138-10895181 6 Aps FBtr0076252|FBtr0076250 10894774|10894774 10896130|10896130 ACTACT 6mer3-8 dme-miR-968-5p 3L - 10895128 10895183 3'utr Aps FlyBase G27213.1 ATTATGAACTAATTCAACTACTAAGATACGTGCACGTTGTACTTTTCAGATGCAAA 6 10895162 0.966027961 4 6 33 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 3L:10895128-10895183 6 4 1105 FBgn0036111 1989.25 99.36 152.7433333 0.002010808 0.040257649 0.026187722 -3 -5 -4 0.25 dme-miR-283-5p 8mer-m1 TGATATTT 3L 11059485 11059492 + 3L_11059485_11059492_+ 0.48283673 0.52641732 0.504627025 0.030816138 CG7888 FBtr0076200|FBtr0076199|FBtr0076201 11059249|11059249|11059249 11059659|11059659|11059659 3L + 11059455 11059522 3'utr CG7888 FlyBase G29503.1 TGTGTATTTGTATAGAATTTAACAGATTTGTGATATTTTTAGCGTCATGCCCAAGAATCTGTACAACA 88 11059481 0.821243861 12 82 894 0.956521739 1.56427143 0.043478261 0.227272727 0.408695652 88 3 2 110 3L:11059455-11059522 8 CG7888 FBtr0076201|FBtr0076200|FBtr0076199 11059249|11059249|11059249 11059659|11059659|11059659 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 11059458 11059526 3'utr CG7888 FlyBase G22326.2 GTATTTGTATAGAATTTAACAGATTTGTGATATTTTTAGCGTCATGCCCAAGAATCTGTACAACAAACG 43 11059481 0.811333434 11 39 396 0.867647059 1.071882007 0.088235294 0.441860465 0.647058824 43 5 4 59 3L:11059458-11059526 8 56 1106 FBgn0036116 3.67 0.246666667 0.366666667 15.25885559 227.027027 152.7272727 4 4 4 0.25 dme-bantam-3p 8mer-A1 TGATCTCA 3L 11066820 11066827 + 3L_11066820_11066827_+ 0.53297417 0.537067341 0.535020755 0.002894259 CG45101 FBtr0344636 11065373 11069025 3L + 11066791 11066844 3'utr CG45101 FlyBase G29510.1 AGCAAAAAAACGTCACCGCGCAAAAAAGCTGATCTCACCGATTCCGAAGAGGAT 26 11066820 0.919586977 3 24 79 0.933333333 1.447158031 0.4 0.115384615 0.233333333 26 2 0 28 3L:11066791-11066844 8 CG45101 FBtr0344636 11065373 11069025 TGATCTCA 8mer-A1 dme-bantam-3p 3L + 11066799 11066839 3'utr CG45101 FlyBase G22333.1 AACGTCACCGCGCAAAAAAGCTGATCTCACCGATTCCGAAG 16 11066820 0.920649309 3 16 39 1 1.322219295 0.238095238 0.25 0.428571429 16 0 0 21 3L:11066799-11066839 8 21 1107 FBgn0266540 111.74 3.59 5.523333333 0.187936281 5.849582173 3.802051901 0 0 0 0.25 dme-miR-932-5p 7mer-A1 GAATTGA 3L 11178282 11178288 - 3L_11178282_11178288_- 0.82318632 0.822582424 0.822884372 0.000427022 GlcAT-P FBtr0076190|FBtr0306254|FBtr0076189|FBtr0100422|FBtr0306255 11176952|11176952|11176952|11176952|11176952 11178417|11178417|11178417|11178417|11178417 3L - 11178246 11178320 3'utr GlcAT-P FlyBase G36087.2 AGGTACAATCCGGCGCACGGAGATACCAATCAGAATTGATCAGATCATTAGTCGGTGTACATTATTATCATAATC 78 11178285 0.736333693 10 72 412 0.948979592 1.667452953 0.214285714 0.207792208 0.37755102 77 4 1 93 3L:11178246-11178320 7 GlcAT-P FBtr0076190|FBtr0306255|FBtr0100422|FBtr0076189|FBtr0306254 11176952|11176952|11176952|11176952|11176952 11178417|11178417|11178417|11178417|11178417 GAATTGA 7mer-A1 dme-miR-932-5p 3L - 11178167 11178318 3'utr GlcAT-P FlyBase G27282.2 GTACAATCCGGCGCACGGAGATACCAATCAGAATTGATCAGATCATTAGTCGGTGTACATTATTATCATAATCATATGATTAGTTAGGCTCTAAGCGCACACATACCTATGATAATTCTTTGCACCGTAGTCTTTGTTTGTTCGCACACCTA 77 11178285 0.746255967 19 73 461 0.930434783 2.029383778 0.156521739 0.363636364 0.573913043 77 8 0 107 3L:11178167-11178318 7 61.5 1108 FBgn0036144 1851.176667 64.88333333 98.86 0.033222113 0.947855125 0.622091847 -3 -3 -3 0.25 dme-miR-92b-3p 6mer3-8 GTGCAA 3L 11227856 11227861 + 3L_11227856_11227861_+ 0.704767218 0.773575855 0.739171537 0.048655098 CG42671 FBtr0304934|FBtr0302699|FBtr0302696|FBtr0302697|FBtr0330283|FBtr0339906|FBtr0304933 11227708|11227708|11227708|11227708|11227741|11227708|11227708 11229635|11228546|11228546|11228546|11228546|11230512|11229635 3L + 11227832 11227881 3'utr CG42671 FlyBase G29560.1 AAACATGCCACACGATCTAACATGGTGCAAGCAGCAGCGGCAGCAGCAGA 33 11227854 0.908619258 2 31 97 0.976190476 1.311753861 0.523809524 0.151515152 0.333333333 33 0 1 41 3L:11227832-11227881 6 CG42671 FBtr0302696|FBtr0302699|FBtr0304934|FBtr0304933|FBtr0339906|FBtr0330283|FBtr0302697 11227708|11227708|11227708|11227708|11227708|11227741|11227708 11228546|11228546|11229635|11229635|11230512|11228546|11228546 GTGCAA 6mer3-8 dme-miR-92b-3p 3L + 11227836 11227876 3'utr CG42671 FlyBase G22362.1 ATGCCACACGATCTAACATGGTGCAAGCAGCAGCGGCAGCA 20 11227854 0.907060548 2 20 63 1 1.579783597 0.473684211 0.55 0.763157895 20 0 0 38 3L:11227836-11227876 6 26 1109 FBgn0261553 751.82 16.21 24.91666667 0.034582746 1.60394818 1.043478261 2 2 2 0.25 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3L 11229809 11229814 + 3L_11229809_11229814_+ 0.784304928 0.783440029 0.783872478 0.000611577 CG42671 FBtr0345849|FBtr0339906|FBtr0339907 11229352|11227708|11229352 11230745|11230512|11230512 3L + 11229789 11229834 3'utr CG42671 FlyBase G29563.1 TATTCTAGCATTGTCGACTTTGGTGCAAATAACTTAAATATTATAC 33 11229809 0.751763781 4 32 278 0.975 1.591064607 0.1 0.181818182 0.325 33 1 0 39 3L:11229789-11229834 6 CG42671 FBtr0345849|FBtr0339907|FBtr0339906 11229352|11229352|11227708 11230745|11230512|11230512 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3L + 11229787 11229828 3'utr CG42671 FlyBase G22366.1 GATATTCTAGCATTGTCGACTTTGGTGCAAATAACTTAAATA 29 11229808 0.761275036 3 27 230 0.975 1.591064607 0.175 0.310344828 0.5 29 1 0 39 3L:11229787-11229828 6 30.5 1110 FBgn0261553 751.82 16.21 24.91666667 0.040568221 1.881554596 1.224080268 0 1 0.5 0.25 dme-bantam-3p 6mer3-8 TGATCT 3L 11254488 11254493 + 3L_11254488_11254493_+ 0.983285015 0.997129133 0.990207074 0.009789257 scyl FBtr0076168|FBtr0339908 11254474|11254474 11255243|11256172 3L + 11254435 11254665 stop_codon scyl FlyBase G29573.2 CCCATAGACCCAGTGCGGCCATCGCCACGCCCACCAACTAATGGTGATCAGCTTGATCTGTCAGATATGCATATGTTCGTATATGTGTCTGCGCGAAACAAAAAAAACACCACCCCTGTGATGATCGAGAGCAGTAGTTTGTTGCAGTTTGAAGTGCAACAACGAAGCAAGTATTCGAAGCCACCCCACCTACACCACACACACACACACACAAACACCTTTAATACACAC 974 11254488 0.826653055 34 923 7015 0.937552743 1.966532813 0.401687764 0.169404517 0.317299578 974 63 11 1111 3L:11254435-11254665 6 scyl FBtr0076168|FBtr0339908 11254474|11254474 11255243|11256172 TGATCT 6mer3-8 dme-bantam-3p 3L + 11254433 11254530 stop_codon scyl FlyBase G22379.1 CGCCCATAGACCCAGTGCGGCCATCGCCACGCCCACCAACTAATGGTGATCAGCTTGATCTGTCAGATATGCATATGTTCGTATATGTGTCTGCGCGA 530 11254488 0.919211239 16 507 4036 0.955762515 1.914343157 0.464493597 0.435849057 0.651920838 530 29 9 821 3L:11254433-11254530 6 655.5 1111 FBgn0041094 3053.616667 135.47 208.0166667 0.214663486 4.838709677 3.151189809 0 0 0 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 11255018 11255024 + 3L_11255018_11255024_+ 0.697391915 0.718328279 0.707860097 0.01480427 scyl FBtr0076168|FBtr0076168|FBtr0076168|FBtr0339908|FBtr0339908|FBtr0339908 11254474|11254474|11254474|11254474|11254474|11254474 11255243|11255243|11255243|11256172|11256172|11256172 3L + 11254967 11255101 3'utr scyl FlyBase G29576.1 ATATTTCTGGGGCATTCGCTTTGGGGCTCGCCGGTCGACAACTCATGAATATGTGATACTGTTTAAGATGCTAAGAGTTTTTTGCCGGATGCACCAAAGTCCGGCAAAAGACGTTGATAAAATTACACATAACAC 379 11255013 0.814937502 27 324 2884 0.860759494 2.133538908 0.297468354 0.213720317 0.371308017 379 64 2 408 3L:11254967-11255101 7 scyl FBtr0076168|FBtr0076168|FBtr0076168|FBtr0339908|FBtr0339908|FBtr0339908 11254474|11254474|11254474|11254474|11254474|11254474 11255243|11255243|11255243|11256172|11256172|11256172 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 11254915 11255103 3'utr scyl FlyBase G22383.1 AAACCAACATGAAATTCAAAGACGACAGCCCCACGAATCAATCCCCAGAATCATATTTCTGGGGCATTCGCTTTGGGGCTCGCCGGTCGACAACTCATGAATATGTGATACTGTTTAAGATGCTAAGAGTTTTTTGCCGGATGCACCAAAGTCCGGCAAAAGACGTTGATAAAATTACACATAACACAC 313 11255013 0.999641769 30 260 2304 0.834728033 1.822821645 0.336820084 0.370607029 0.587866109 313 74 5 399 3L:11254915-11255103 7 240.5 1112 FBgn0041094 3053.616667 135.47 208.0166667 0.078759067 1.775300805 1.156157359 5 5 5 0.25 dme-miR-1003-3p 7mer-A1 TGTGAGA 3L 11256039 11256045 + 3L_11256039_11256045_+ 0.73674966 0.672135941 0.7044428 0.045688856 scyl FBtr0339908 11254474 11256172 3L + 11256013 11256061 3'utr scyl FlyBase G29583.1 TTTATTGCGTAAAACAACAAAATAATTGTGAGAAATTTGTAACCAAAAC 25 11256038 0.698190375 5 25 143 1 1.505149978 0.25 0.16 0.34375 25 0 0 32 3L:11256013-11256061 7 scyl FBtr0339908 11254474 11256172 TGTGAGA 7mer-A1 dme-miR-1003-3p 3L + 11256020 11256062 3'utr scyl FlyBase G22389.1 CGTAAAACAACAAAATAATTGTGAGAAATTTGTAACCAAAACA 23 11256038 0.962665033 2 23 122 1 1.51851394 0.181818182 0.391304348 0.575757576 23 0 0 33 3L:11256020-11256062 7 24 1113 FBgn0041094 3053.616667 135.47 208.0166667 0.007859533 0.177160995 0.115375371 1 1 1 0.25 dme-miR-277-3p 7mer-m8 TGCATTT 3L 1141097 1141103 - 3L_1141097_1141103_- 0.58967704 0.598933361 0.5943052 0.006545263 bab2 FBtr0333271|FBtr0072639 1140427|1140427 1141967|1141967 3L - 1141083 1141124 3'utr bab2 FlyBase G33220.1 AAAGTTACGATTAGAGACTTGTGCATTTCTTAAATGTAGCTT 9 1141103 0.975095415 3 9 61 1 1 0 0.111111111 0.2 9 0 0 10 3L:1141083-1141124 7 bab2 FBtr0333271|FBtr0072639 1140427|1140427 1141967|1141967 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 1141067 1141131 3'utr bab2 FlyBase G25135.1 AAACATTAAAGTTACGATTAGAGACTTGTGCATTTCTTAAATGTAGCTTAACCCTAGAATAGCCC 11 1141104 0.982455407 6 11 84 1 1.204119983 0.0625 0.363636364 0.5625 11 0 0 16 3L:1141067-1141131 7 9 1114 FBgn0025525 40 0.97 1.503333333 0.225 9.278350515 5.986696231 0 1 0.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 11496018 11496024 + 3L_11496018_11496024_+ 0.694210869 0.654782846 0.674496858 0.027879877 chrb FBtr0076093|FBtr0076093|FBtr0076093|FBtr0344910|FBtr0344910|FBtr0344910 11495094|11495094|11495094|11495094|11495094|11495094 11499055|11499055|11499055|11499055|11499055|11499055 3L + 11495994 11496040 3'utr chrb FlyBase G29591.1 TAACAAATATAAAAACAAAGTTGATGTGATATTATATAATAATTATG 53 11496015 0.851912783 6 51 498 0.965517241 1.748188027 0.034482759 0.075471698 0.155172414 53 2 0 56 3L:11495994-11496040 7 chrb FBtr0076093|FBtr0076093|FBtr0076093|FBtr0344910|FBtr0344910|FBtr0344910 11495094|11495094|11495094|11495094|11495094|11495094 11499055|11499055|11499055|11499055|11499055|11499055 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 11495959 11496040 3'utr chrb FlyBase G22395.1 TCGATCAATCGAGGCAGAAAGAGGAAAGTTAATAATAACAAATATAAAAACAAAGTTGATGTGATATTATATAATAATTATG 43 11496015 0.989287264 8 39 372 0.933333333 1.748188027 0.05 0.372093023 0.55 43 4 0 56 3L:11495959-11496040 7 46 1115 FBgn0036165 903.39 19.18 29.98 0.050919315 2.398331595 1.534356237 3 3 3 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 3L 11496820 11496825 + 3L_11496820_11496825_+ 0.822710152 0.990965365 0.906837758 0.118974393 chrb FBtr0076093|FBtr0344910 11495094|11495094 11499055|11499055 3L + 11496805 11496841 3'utr chrb FlyBase G29592.1 AAATATAAAGTCATCTGTGTTAATAAATTTTAAAATA 9 11496818 0.827834511 2 7 76 0.923076923 1.079181246 0 0.222222222 0.461538462 9 1 0 12 3L:11496805-11496841 6 chrb FBtr0076093|FBtr0344910 11495094|11495094 11499055|11499055 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 11496806 11496830 3'utr chrb FlyBase G22396.1 AATATAAAGTCATCTGTGTTAATAA 5 11496819 0.68393326 2 5 35 1 0.84509804 0 0.4 0.571428571 5 0 0 7 3L:11496806-11496830 6 6.5 1116 FBgn0036165 903.39 19.18 29.98 0.007195121 0.338894682 0.216811207 2 1 1.5 0.25 dme-miR-11-3p 8mer-m1 CTGTGATG 3L 11642549 11642556 + 3L_11642549_11642556_+ 0.451165345 0.453135285 0.452150315 0.001393 CG32091 FBtr0076106 11642492 11642902 3L + 11642497 11642597 3'utr CG32091 FlyBase G29620.1 TGAAACCAATATTCCAGATGAATCTTATCCCTAGCTTTAGGCAATGTCAATGCTGTGATGTTCGATTTTAAACAGACAGATAGATACTTCCTGTACATACT 56 11642547 0.985532041 11 55 457 0.986111111 1.851258349 0.111111111 0.196428571 0.375 56 1 0 71 3L:11642497-11642597 8 CG32091 FBtr0076106 11642492 11642902 CTGTGATG 8mer-m1 dme-miR-11-3p 3L + 11642523 11642574 3'utr CG32091 FlyBase G22414.1 ATCCCTAGCTTTAGGCAATGTCAATGCTGTGATGTTCGATTTTAAACAGACA 37 11642547 0.828858196 4 34 295 0.929824561 1.72427587 0.140350877 0.416666667 0.631578947 36 4 0 53 3L:11642523-11642574 8 41.5 1117 FBgn0052091 18 0.773333333 1.216666667 2.305555556 53.6637931 34.10958904 2 2 2 0.25 dme-miR-1008-3p 7mer-A1 GCTGTGA 3L 11650746 11650752 - 3L_11650746_11650752_- 0.319816476 0.319201744 0.31950911 0.000434729 CG32085 FBtr0076133 11650515 11650969 3L - 11650735 11650835 3'utr CG32085 FlyBase G36203.1 AAGTTCCTCGCGTGCTATGTGACTTTAACTTTCCGTCAACACTGTACTCTATCCCTTATAGTTTTAGACTTATTTTGATTTCTGCTGTGATTTGATACGGA 50 11650744 0.743598742 21 48 494 0.970588235 1.51851394 0.323529412 0.26 0.455882353 50 1 1 66 3L:11650735-11650835 7 CG32085 FBtr0076133 11650515 11650969 GCTGTGA 7mer-A1 dme-miR-1008-3p 3L - 11650731 11650772 3'utr CG32085 FlyBase G27361.1 TTAGACTTATTTTGATTTCTGCTGTGATTTGATACGGAACTT 33 11650744 0.667713719 8 31 317 1 1.716003344 0.365384615 0.393939394 0.615384615 33 0 0 52 3L:11650731-11650772 7 31 1118 FBgn0052085 2.333333333 0.09 0.133333333 13.28571429 344.4444444 232.5 -8 -8 -8 0.25 dme-miR-305-5p 7mer-A1 GTACAAA 3L 11683771 11683777 + 3L_11683771_11683777_+ 0.746788868 0.761459358 0.754124113 0.01037361 TfIIEalpha FBtr0076108 11683668 11683805 3L + 11683710 11683791 3'utr TfIIEalpha FlyBase G29637.1 GTTTCCCATCTCACGCATAGAGTCATTGTAATTTAAGTTACCCACTAGTTCGAGCGAATGTGTACAAATGAAATGCGTATAA 25 11683768 0.841836871 8 24 152 1 1.491361694 0.129032258 0.24 0.387096774 25 0 0 31 3L:11683710-11683791 7 TfIIEalpha FBtr0076108 11683668 11683805 GTACAAA 7mer-A1 dme-miR-305-5p 3L + 11683707 11683792 3'utr TfIIEalpha FlyBase G22426.1 CGAGTTTCCCATCTCACGCATAGAGTCATTGTAATTTAAGTTACCCACTAGTTCGAGCGAATGTGTACAAATGAAATGCGTATAAA 23 11683769 0.962600594 8 21 113 0.933333333 1.447158031 0.1 0.260869565 0.433333333 23 2 0 28 3L:11683707-11683792 7 17.5 1119 FBgn0015828 547.3633333 41.38 63.43333333 0.031971451 0.422909618 0.275880189 3 2 2.5 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 11688588 11688595 + 3L_11688588_11688595_+ 0.495437838 0.495418861 0.495428349 1.34E-05 Sug FBtr0273362 11688459 11688825 3L + 11688565 11688617 3'utr Sug FlyBase G29641.1 ATGCAGTGGATACGCTGGCCATTGTACTTAAACCACCATATATTTTGTAAGAT 116 11688587 0.77378824 3 110 727 0.969924812 1.809559715 0.015037594 0.129310345 0.240601504 116 3 1 129 3L:11688565-11688617 8 Sug FBtr0273362 11688459 11688825 GTACTTAA 8mer-A1 dme-miR-252-5p 3L + 11688565 11688606 3'utr Sug FlyBase G22429.1 ATGCAGTGGATACGCTGGCCATTGTACTTAAACCACCATATA 71 11688587 0.759257945 2 71 424 1 2.017033339 0 0.352112676 0.557692308 71 0 0 104 3L:11688565-11688606 8 92.5 1120 FBgn0036191 390.82 14.43333333 22.11666667 0.236681848 6.408775982 4.18236624 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 11689729 11689734 + 3L_11689729_11689734_+ 0.990703908 0.997577537 0.994140723 0.004860369 Sug FBtr0344966|FBtr0344966|FBtr0344966|FBtr0300100|FBtr0300100|FBtr0300100 11689180|11689180|11689180|11689180|11689180|11689180 11690155|11690155|11690155|11690155|11690155|11690155 3L + 11689720 11689755 3'utr Sug FlyBase G29646.1 TTTTTTTTTCTGTGAAATCTCTTAAGTGCTTACTTA 6 11689728 0.60911767 4 6 69 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3L:11689720-11689755 6 Sug FBtr0344966|FBtr0344966|FBtr0344966|FBtr0300100|FBtr0300100|FBtr0300100 11689180|11689180|11689180|11689180|11689180|11689180 11690155|11690155|11690155|11690155|11690155|11690155 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 11689722 11689749 3'utr Sug FlyBase G22433.1 TTTTTTTCTGTGAAATCTCTTAAGTGCT 5 11689742 0.645295107 3 5 43 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 3L:11689722-11689749 6 5 1121 FBgn0036191 390.82 14.43333333 22.11666667 0.012793613 0.346420323 0.226073851 1 -13 -6 0.25 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 3L 11700022 11700029 - 3L_11700022_11700029_- 0.623073632 0.623654842 0.623364237 0.00041097 CG11658 FBtr0076126 11699494 11700696 3L - 11700003 11700050 3'utr CG11658 FlyBase G36217.1 TTAACGTTTATCAGCTGCTTTTGGTGCTAAATCGTATTATAAGTTACA 128 11700030 0.753466129 5 124 1365 0.972413793 2.149219113 0.137931034 0.125 0.227586207 128 4 0 141 3L:11700003-11700050 8 CG11658 FBtr0076126 11699494 11700696 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 3L - 11700004 11700050 3'utr CG11658 FlyBase G27374.1 TTAACGTTTATCAGCTGCTTTTGGTGCTAAATCGTATTATAAGTTAC 74 11700030 0.735024211 8 71 748 0.972972973 2.033423755 0.126126126 0.364864865 0.576576577 74 3 0 108 3L:11700004-11700050 8 100.5 1122 FBgn0036196 52.87 2.63 4.06 1.900888973 38.21292776 24.75369458 1 1 1 0.25 dme-miR-2a-2-5p 8mer-m1 TGATGAGG 3L 11732005 11732012 + 3L_11732005_11732012_+ 0.391998573 0.593029414 0.492513994 0.142150242 CG32088 FBtr0332764 11731940 11732048 3L + 11731956 11732029 3'utr CG32088 FlyBase G29673.1 ATATTCTCATAGACAAAAGCTCTGCATACTATAAATATAGTAAATTGAATGATGAGGCTCAACATATGTCTAAT 57 11732008 0.85941128 8 53 307 0.944444444 1.355387658 0 0.192982456 0.361111111 57 2 2 68 3L:11731956-11732029 8 CG32088 FBtr0332764 11731940 11732048 TGATGAGG 8mer-m1 dme-miR-2a-2-5p 3L + 11731989 11732024 3'utr CG32088 FlyBase G22450.1 AATATAGTAAATTGAATGATGAGGCTCAACATATGT 34 11732008 0.822156221 4 33 161 1 1.73239376 0 0.411764706 0.62962963 34 0 0 54 3L:11731989-11732024 8 41 1123 FBgn0052088 164.3333333 6.503333333 9.94 0.249492901 6.304459252 4.124748491 -3 -3 -3 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3L 11786160 11786166 - 3L_11786160_11786166_- 0.521141264 0.514548127 0.517844695 0.004662096 Pi3K68D FBtr0076086|FBtr0332055 11786050|11786050 11786625|11786625 3L - 11786146 11786192 5'utr Pi3K68D FlyBase G36244.1 AACCATGTATTACGAAATGAACAAATTGTGATTTGCTGCTACATATA 60 11786166 0.982590998 4 59 452 0.987341772 1.591064607 0.215189873 0.216666667 0.405063291 60 0 1 78 3L:11786146-11786192 7 Pi3K68D FBtr0332055|FBtr0076086 11786050|11786050 11786625|11786625 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 11786151 11786181 5'utr Pi3K68D FlyBase G27394.1 ACGAAATGAACAAATTGTGATTTGCTGCTAC 35 11786160 0.573528481 5 35 263 1 1.785329835 0.245901639 0.457142857 0.68852459 35 0 0 61 3L:11786151-11786181 7 47.5 1124 FBgn0015278 1326.206667 35.56 54.69 0.035816439 1.335770529 0.868531724 0 -6 -3 0.25 dme-miR-965-3p 8mer-A1 TACGCTTA 3L 11826959 11826966 - 3L_11826959_11826966_- 0.625217607 0.625184817 0.625201212 2.32E-05 CycA FBtr0304650 11826717 11827651 3L - 11826842 11827051 3'utr CycA FlyBase G36271.1 TAAAAAACTCACACTGATCGTGCTCAGAACGGCAGGCAGCCGTGGAATGTTGCTAAACTCTTGTTCTTGTAATCTTGTAATCTTATACGCTTACTAAATGTTTACTAAACTTAGTCTAGACCATCTTGCGACCACATATGTAGCTAGAATAGAGCGCTGCCGAAATGCGTACAGCCAGATGATGGGTCTTACTTTACACTTAGGTTTATG 90 11826967 0.953024251 28 82 708 0.91509434 1.384711743 0.150943396 0.166666667 0.29245283 90 6 3 97 3L:11826842-11827051 8 CycA FBtr0304650 11826717 11827651 TACGCTTA 8mer-A1 dme-miR-965-3p 3L - 11826893 11827009 3'utr CycA FlyBase G27411.1 TGGAATGTTGCTAAACTCTTGTTCTTGTAATCTTGTAATCTTATACGCTTACTAAATGTTTACTAAACTTAGTCTAGACCATCTTGCGACCACATATGTAGCTAGAATAGAGCGCTG 55 11826967 0.849991589 14 47 549 0.845238095 1.374137094 0.154761905 0.436363636 0.630952381 55 11 2 71 3L:11826893-11827009 8 43 1125 FBgn0000404 2869.163333 125.9133333 194.37 0.014986947 0.341504739 0.221227556 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 11827114 11827119 - 3L_11827114_11827119_- 0.998619249 0.991080099 0.994849674 0.005330949 CycA FBtr0076075|FBtr0076075|FBtr0076075|FBtr0304650|FBtr0304650|FBtr0304650 11827081|11827081|11827081|11826717|11826717|11826717 11827651|11827651|11827651|11827651|11827651|11827651 3L - 11827097 11827140 3'utr CycA FlyBase G36272.1 ACTATTTACTCCGTAAATGTTCTGTGAACTCCAAAACAAATATA 26 11827120 0.973508664 6 24 185 0.944444444 1.230448921 0 0.230769231 0.444444444 26 1 1 34 3L:11827097-11827140 6 CycA FBtr0076075|FBtr0076075|FBtr0076075|FBtr0304650|FBtr0304650|FBtr0304650 11827081|11827081|11827081|11826717|11826717|11826717 11827651|11827651|11827651|11827651|11827651|11827651 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 11827099 11827140 3'utr CycA FlyBase G27413.1 ACTATTTACTCCGTAAATGTTCTGTGAACTCCAAAACAAATA 27 11827120 0.804497104 7 26 192 0.951219512 1.591064607 0.048780488 0.37037037 0.585365854 27 2 0 39 3L:11827099-11827140 6 25.5 1126 FBgn0000404 2869.163333 125.9133333 194.37 0.008887608 0.202520252 0.131193085 1 1 1 0.25 dme-miR-31a-5p 8mer-A1 TCTTGCCA 3L 11993719 11993726 - 3L_11993719_11993726_- 0.442635142 0.447066268 0.444850705 0.003133332 Grip163 FBtr0076061 11993272 11993752 3L - 11993699 11993875 stop_codon Grip163 FlyBase G36300.1 AAGGCGGCCGCTTCTGGTTACCAGGAGGAAATCGGTGACCTGATTTGTATTATTAACTTTAACCACTATTACAAGGTATCTGGGAACCATACTGGTTCCTCAATGGAGGACAAAAAGTGCTAGCCAATAATTGTTAGATAGGGAATTTATCTTGCCATTAAGCTGAGCTTAGAACAT 70 11993718 0.949236192 14 68 606 0.976190476 1.913813852 0.154761905 0.171428571 0.30952381 70 2 0 82 3L:11993699-11993875 8 Grip163 FBtr0076061 11993272 11993752 TCTTGCCA 8mer-A1 dme-miR-31a-5p 3L - 11993701 11993853 stop_codon Grip163 FlyBase G27431.1 AGGAGGAAATCGGTGACCTGATTTGTATTATTAACTTTAACCACTATTACAAGGTATCTGGGAACCATACTGGTTCCTCAATGGAGGACAAAAAGTGCTAGCCAATAATTGTTAGATAGGGAATTTATCTTGCCATTAAGCTGAGCTTAGAAC 43 11993718 0.895317004 12 42 352 0.958333333 1.236789099 0.097222222 0.441860465 0.666666667 43 0 3 69 3L:11993701-11993853 8 22 1127 FBgn0026432 421 10.95666667 16.75333333 0.052256532 2.007909948 1.313171508 -8 -8 -8 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 3L 12143112 12143119 + 3L_12143112_12143119_+ 0.641930248 0.64165682 0.641793534 0.000193323 RhoGAP68F FBtr0334092|FBtr0334091|FBtr0075997|FBtr0334093 12142827|12142827|12142827|12142827 12143380|12143380|12143380|12143380 3L + 12143062 12143135 3'utr RhoGAP68F FlyBase G29720.1 CCGAAAATCACAATTATTTACCCCCAACAAGCGCTTAATACGATTGATTTACCAAAGAAATTTGCTCGTGTTCG 31 12143111 0.974028894 8 30 186 0.974358974 1.278753601 0.128205128 0.225806452 0.384615385 31 0 1 38 3L:12143062-12143135 8 RhoGAP68F FBtr0334093|FBtr0075997|FBtr0334091|FBtr0334092 12142827|12142827|12142827|12142827 12143380|12143380|12143380|12143380 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 12143083 12143131 3'utr RhoGAP68F FlyBase G22497.1 CCCCAACAAGCGCTTAATACGATTGATTTACCAAAGAAATTTGCTCGTG 22 12143111 0.979592546 4 20 133 0.903225806 1.146128036 0.258064516 0.272727273 0.483870968 22 2 1 28 3L:12143083-12143131 8 23.5 1128 FBgn0036257 644.8233333 34.92 53.27666667 0.036444091 0.672966781 0.441093662 1 1 1 0.25 dme-miR-1006-3p 6mer2-7 GAATTT 3L 12143308 12143313 + 3L_12143308_12143313_+ 0.999499248 0.984353506 0.991926377 0.010709627 RhoGAP68F FBtr0334092|FBtr0334091|FBtr0075997|FBtr0334093 12142827|12142827|12142827|12142827 12143380|12143380|12143380|12143380 3L + 12143266 12143329 3'utr RhoGAP68F FlyBase G29723.1 AGTGGAGTTGTGGCGAACTCAAAAATCGTACTGTGTAGTCTTGAATTTCCTTATAGTCATACAA 14 12143311 0.993605789 7 10 119 0.764705882 1.113943352 0.176470588 0.142857143 0.294117647 14 4 0 13 3L:12143266-12143329 6 RhoGAP68F FBtr0334093|FBtr0075997|FBtr0334091|FBtr0334092 12142827|12142827|12142827|12142827 12143380|12143380|12143380|12143380 GAATTT 6mer2-7 dme-miR-1006-3p 3L + 12143287 12143331 3'utr RhoGAP68F FlyBase G22500.1 AAAATCGTACTGTGTAGTCTTGAATTTCCTTATAGTCATACAAAC 7 12143316 0.652171008 5 6 64 0.888888889 0.903089987 0 0.285714286 0.444444444 7 1 0 8 3L:12143287-12143331 6 8 1129 FBgn0036257 644.8233333 34.92 53.27666667 0.012406499 0.229095074 0.150159545 -3 -8 -5.5 0.25 dme-miR-34-5p 8mer-A1 CACTGCCA 3L 12156412 12156419 + 3L_12156412_12156419_+ 0.677900664 0.676805984 0.677353324 0.00077407 Nrx-IV FBtr0075999|FBtr0075998 12156240|12156240 12156990|12156990 3L + 12156394 12156468 3'utr Nrx-IV FlyBase G29736.1 AGAAAATACTTTTCCATGCACTGCCAATTGTTTTGCGCAAGTAAATGCTAAGATTTGATTTATAATTGGTTGGCT 20 12156410 0.985961967 6 20 165 1 1.397940009 0.32 0.25 0.4 20 0 0 25 3L:12156394-12156468 8 Nrx-IV FBtr0075999|FBtr0075998 12156240|12156240 12156990|12156990 CACTGCCA 8mer-A1 dme-miR-34-5p 3L + 12156339 12156426 3'utr Nrx-IV FlyBase G22508.1 GAGAACGAAGTGAAAATCAAATAGACACGGAAAAGGCTCACCACGCATAACAGACAGAAAATACTTTTCCATGCACTGCCAATTGTTT 18 12156410 0.979549987 4 18 123 1 1.447158031 0.357142857 0.333333333 0.571428571 18 0 0 28 3L:12156339-12156426 8 16.5 1130 FBgn0013997 1120.423333 27.23333333 41.64333333 0.014726577 0.605875153 0.396221884 2 2 2 0.25 dme-miR-184-3p 7mer-A1 CCGTCCA 3L 12156548 12156554 + 3L_12156548_12156554_+ 0.692411493 0.708131825 0.700271659 0.011115931 Nrx-IV FBtr0075999|FBtr0075998 12156240|12156240 12156990|12156990 3L + 12156491 12156571 3'utr Nrx-IV FlyBase G29737.1 TTTTTAGTCTTTGGTTCTGTCTGACGGCATTATTGAAATTTCTTCTATCACAGAATACCGTCCATTTTTAGTTAATTTTAT 469 12156546 0.960489492 18 449 4593 0.956603774 1.625826713 0.020754717 0.1108742 0.213207547 469 12 11 507 3L:12156491-12156571 7 Nrx-IV FBtr0075999|FBtr0075998 12156240|12156240 12156990|12156990 CCGTCCA 7mer-A1 dme-miR-184-3p 3L + 12156496 12156571 3'utr Nrx-IV FlyBase G22509.1 AGTCTTTGGTTCTGTCTGACGGCATTATTGAAATTTCTTCTATCACAGAATACCGTCCATTTTTAGTTAATTTTAT 187 12156546 0.951413117 15 173 1622 0.91634981 1.302835797 0.02661597 0.320855615 0.517110266 187 11 11 241 3L:12156496-12156571 7 316.5 1131 FBgn0013997 1120.423333 27.23333333 41.64333333 0.282482514 11.62178703 7.600256143 2 2 2 0.25 dme-miR-1012-3p 6mer3-8 TTGACT 3L 12156856 12156861 + 3L_12156856_12156861_+ 0.932096367 0.756299814 0.844198091 0.124306968 Nrx-IV FBtr0075999|FBtr0075998 12156240|12156240 12156990|12156990 3L + 12156824 12156884 3'utr Nrx-IV FlyBase G29739.1 ATTGTATTTTTGGAAAATGCATTTTGAACGTCTTGACTTGAAATTTTCAAATATACATTAG 17 12156856 0.832425744 7 17 137 1 1.342422681 0.090909091 0.235294118 0.409090909 17 0 0 22 3L:12156824-12156884 6 Nrx-IV FBtr0075999|FBtr0075998 12156240|12156240 12156990|12156990 TTGACT 6mer3-8 dme-miR-1012-3p 3L + 12156844 12156876 3'utr Nrx-IV FlyBase G22511.1 ATTTTGAACGTCTTGACTTGAAATTTTCAAATA 17 12156856 0.767644613 2 16 129 0.961538462 1.096910013 0 0.352941176 0.576923077 17 0 1 25 3L:12156844-12156876 6 15.5 1132 FBgn0013997 1120.423333 27.23333333 41.64333333 0.013834057 0.569155447 0.372208437 0 0 0 0.25 dme-miR-8-3p 7mer-m8 CAGTATT 3L 12269248 12269254 + 3L_12269248_12269254_+ 0.658097789 0.661610865 0.659854327 0.002484137 CG32100 FBtr0076006 12269199 12269803 3L + 12269231 12269286 3'utr CG32100 FlyBase G29741.1 TATATCGTTAGTGCACTCAGTATTTTCTGTTTGTTATGATTAGCTATAGATTCCTT 11 12269247 0.89090119 6 11 138 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 3L:12269231-12269286 7 CG32100 FBtr0076006 12269199 12269803 CAGTATT 7mer-m8 dme-miR-8-3p 3L + 12269231 12269276 3'utr CG32100 FlyBase G22512.1 TATATCGTTAGTGCACTCAGTATTTTCTGTTTGTTATGATTAGCTA 8 12269255 0.991115255 5 8 88 1 1.113943352 0 0.5 0.692307692 8 0 0 13 3L:12269231-12269276 7 8.5 1133 FBgn0052100 96.87 5.46 8.436666667 0.087746464 1.556776557 1.007506914 1 -7 -3 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3L 12269620 12269626 + 3L_12269620_12269626_+ 0.515787753 0.520979601 0.518383677 0.003671157 CG32100 FBtr0076006 12269199 12269803 3L + 12269578 12269705 3'utr CG32100 FlyBase G29742.1 AGAGCCGGATCCAATTGTTTATGTACTTAATGCATTTGATTTTGTGATTTTAATCTTTTCGTAAGACTCGAAACTGGTACCAATTTAGCAAGTAAGCTCCAGCCAGTGTTCAATGCTCACCGTAGCCC 16 12269599 0.99013347 9 16 160 1 1.342422681 0.090909091 0.25 0.454545455 16 0 0 22 3L:12269578-12269705 7 CG32100 FBtr0076006 12269199 12269803 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 12269590 12269629 3'utr CG32100 FlyBase G22513.1 AATTGTTTATGTACTTAATGCATTTGATTTTGTGATTTTA 5 12269627 0.993685563 3 4 47 0.692307692 0.954242509 0.307692308 0.6 0.846153846 5 4 0 9 3L:12269590-12269629 7 5 1134 FBgn0052100 96.87 5.46 8.436666667 0.051615567 0.915750916 0.592651126 21 -7 7 0.25 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 3L 12270036 12270041 - 3L_12270036_12270041_- 0.979363278 0.971785491 0.975574385 0.005358314 Pbgs FBtr0076011|FBtr0076011|FBtr0333357|FBtr0333357 12269966|12269966|12269450|12269450 12270291|12270291|12270291|12270291 3L - 12270031 12270082 3'utr Pbgs FlyBase G36359.1 ATTTTACCGATTAAGTGGCTTAAATAAGACTCAAAGGCTTTTACTTACATCA 59 12270042 0.802408982 8 55 364 0.943661972 1.348953548 0.056338028 0.203389831 0.338028169 59 2 2 67 3L:12270031-12270082 6 Pbgs FBtr0076011|FBtr0076011|FBtr0333357|FBtr0333357 12269966|12269966|12269450|12269450 12270291|12270291|12270291|12270291 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 3L - 12270029 12270082 3'utr Pbgs FlyBase G27466.1 ATTTTACCGATTAAGTGGCTTAAATAAGACTCAAAGGCTTTTACTTACATCAAT 28 12270042 0.971497265 7 27 162 0.971428571 1.230448921 0.171428571 0.142857143 0.314285714 28 0 1 34 3L:12270029-12270082 6 23.5 1135 FBgn0036271 224.0566667 17.76333333 27 0.104884181 1.322949897 0.87037037 1 1 1 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3L 12281123 12281129 + 3L_12281123_12281129_+ 0.820792036 0.818626074 0.819709055 0.001531523 CG10426 FBtr0076007|FBtr0333356 12281032|12281032 12281476|12281476 3L + 12281086 12281153 3'utr CG10426 FlyBase G29745.1 TGAAATCTATTTAGTCATTTACTCGAATCTCAAAGTGCTAGTCAAAGCTTTCCTACGGTTGTGCGACG 30 12281103 0.896095075 9 24 219 0.777777778 0.970036777 0.305555556 0.2 0.333333333 30 6 2 28 3L:12281086-12281153 7 CG10426 FBtr0333356|FBtr0076007 12281032|12281032 12281476|12281476 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L + 12281085 12281156 3'utr CG10426 FlyBase G22514.1 TTGAAATCTATTTAGTCATTTACTCGAATCTCAAAGTGCTAGTCAAAGCTTTCCTACGGTTGTGCGACGCCT 24 12281121 0.960811269 12 22 166 0.971428571 1.230448921 0.085714286 0.333333333 0.542857143 24 0 1 34 3L:12281085-12281156 7 18 1136 FBgn0036273 103.6666667 4.046666667 6.22 0.173633441 4.448105437 2.893890675 20 2 11 0.25 dme-miR-304-5p 8mer-A1 TGAGATTA 3L 12281298 12281305 + 3L_12281298_12281305_+ 0.541455418 0.579195612 0.560325515 0.026686351 CG10426 FBtr0076007|FBtr0333356 12281032|12281032 12281476|12281476 3L + 12281222 12281377 3'utr CG10426 FlyBase G29746.1 TACTTACCCTGCAATGCTGCGGTAGATCTTAGGCGCTGCCTTTCGCCTCGAGGCCTTAGTCGTAATACGTTCCTTATGAGATTATCTAATACATACTCGTGCAACAATTCTGTACCTCTACTCTGAAGCACAAGCTTAGTTCGTAGATAAACTAAA 70 12281298 0.865425051 18 69 510 0.977272727 1.934498451 0.113636364 0.214285714 0.375 70 2 0 86 3L:12281222-12281377 8 CG10426 FBtr0333356|FBtr0076007 12281032|12281032 12281476|12281476 TGAGATTA 8mer-A1 dme-miR-304-5p 3L + 12281227 12281310 3'utr CG10426 FlyBase G22515.1 ACCCTGCAATGCTGCGGTAGATCTTAGGCGCTGCCTTTCGCCTCGAGGCCTTAGTCGTAATACGTTCCTTATGAGATTATCTAA 22 12281297 0.988781921 11 20 183 0.935483871 1.462397998 0.129032258 0.318181818 0.516129032 22 2 0 29 3L:12281227-12281310 8 16.5 1137 FBgn0036273 103.6666667 4.046666667 6.22 0.159163987 4.077429984 2.652733119 0 1 0.5 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 12281333 12281338 + 3L_12281333_12281338_+ 0.944754409 0.850527315 0.897640862 0.066628621 CG10426 FBtr0076007|FBtr0333356 12281032|12281032 12281476|12281476 3L + 12281222 12281377 3'utr CG10426 FlyBase G29746.1 TACTTACCCTGCAATGCTGCGGTAGATCTTAGGCGCTGCCTTTCGCCTCGAGGCCTTAGTCGTAATACGTTCCTTATGAGATTATCTAATACATACTCGTGCAACAATTCTGTACCTCTACTCTGAAGCACAAGCTTAGTTCGTAGATAAACTAAA 70 12281332 0.865425051 18 69 510 0.977272727 1.934498451 0.113636364 0.214285714 0.375 70 2 0 86 3L:12281222-12281377 6 CG10426 FBtr0333356|FBtr0076007 12281032|12281032 12281476|12281476 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 12281314 12281359 3'utr CG10426 FlyBase G22516.1 ATACTCGTGCAACAATTCTGTACCTCTACTCTGAAGCACAAGCTTA 21 12281332 0.97958391 5 20 141 0.933333333 0.970036777 0 0.333333333 0.533333333 21 0 2 28 3L:12281314-12281359 6 28.5 1138 FBgn0036273 103.6666667 4.046666667 6.22 0.274919614 7.042833608 4.581993569 1 1 1 0.25 dme-miR-1012-3p 6mer3-8 TTGACT 3L 12402673 12402678 - 3L_12402673_12402678_- 0.491035004 0.482866619 0.486950812 0.005775931 CG32103 FBtr0332090 12402293 12404054 3L - 12402656 12402691 3'utr CG32103 FlyBase G36373.1 ACACTTGAATCATTTGACTTGATCATTAAAAATCAC 13 12402678 0.971147033 5 13 102 1 1.255272505 0 0.230769231 0.444444444 13 0 0 18 3L:12402656-12402691 6 CG32103 FBtr0332090 12402293 12404054 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 12402653 12402689 3'utr CG32103 FlyBase G27476.1 ACTTGAATCATTTGACTTGATCATTAAAAATCACCCA 12 12402678 0.978657028 4 11 97 0.947368421 1.255272505 0.052631579 0.5 0.684210526 12 1 0 18 3L:12402653-12402689 6 12.5 1139 FBgn0052103 1942.393333 66.43 101.62 0.00643536 0.188167996 0.123007282 0 0 0 0.25 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 12402929 12402934 - 3L_12402929_12402934_- 0.96253004 0.973264606 0.967897323 0.007590508 CG32103 FBtr0332090 12402293 12404054 3L - 12402897 12402978 3'utr CG32103 FlyBase G36375.1 AACCAACACAATACCCATACACCATGTAATTTATTTGATATATCATGTGAATCTGAAGCCGATCGCAAAACCGACCAATCAT 48 12402931 0.999981988 12 42 286 0.883333333 1.122215878 0.166666667 0.208333333 0.366666667 48 4 3 53 3L:12402897-12402978 6 CG32103 FBtr0332090 12402293 12404054 ATGTGA 6mer3-8 dme-miR-1003-3p 3L - 12402911 12402960 3'utr CG32103 FlyBase G27479.1 ACACCATGTAATTTATTTGATATATCATGTGAATCTGAAGCCGATCGCAA 24 12402931 0.739951906 8 22 159 0.896551724 1.414973348 0.275862069 0.208333333 0.344827586 24 3 0 26 3L:12402911-12402960 6 29.5 1140 FBgn0052103 1942.393333 66.43 101.62 0.015187449 0.444076471 0.290297186 -3 -3 -3 0.25 dme-miR-2a-2-5p 6mer3-8 TGATGA 3L 12403209 12403214 - 3L_12403209_12403214_- 0.807426956 0.836362367 0.821894661 0.020460418 CG32103 FBtr0332090 12402293 12404054 3L - 12403051 12403451 3'utr CG32103 FlyBase G36377.1 AGTTCGTCCCATCCGACTGCTTTCGAAAGCGAATTAGCTTAGCATAAATCAGAGTGAGCCAGGCAGGCGGATTGCGAGTGGGAATCAGGTATCTGAAATCGAGGGATAGACGGATGGATACGGATACTCGGCAGCGTTTAAGCTTAAACACAAAAGACATTAAAACTACGATGTACTCGTTTTTGCTTAGATTAATCGATTACACAAAAAAATGAGAAACACTTAACGTTTACAATGTGATGATAATAGTTTATAATATACACATATAAATACATATAACTATACCTATACCTACTAAAATACCGACTTGTAAGCTTCAAATAGCTGTCGCAGTCTCTTGAGCAAGTTCGGCGGCGAGGCTGAAGAAAACTTTGTAGCATTTTATTTGTTAAGTTTAGTAA 255 12403221 0.887726428 61 235 1896 0.920792079 1.600506163 0.191419142 0.164705882 0.297029703 255 18 6 279 3L:12403051-12403451 6 CG32103 FBtr0332090 12402293 12404054 TGATGA 6mer3-8 dme-miR-2a-2-5p 3L - 12403062 12403240 3'utr CG32103 FlyBase G27481.1 ATGAGAAACACTTAACGTTTACAATGTGATGATAATAGTTTATAATATACACATATAAATACATATAACTATACCTATACCTACTAAAATACCGACTTGTAAGCTTCAAATAGCTGTCGCAGTCTCTTGAGCAAGTTCGGCGGCGAGGCTGAAGAAAACTTTGTAGCATTTTATTTGTT 145 12403208 0.987390968 33 134 1198 0.942477876 1.851258349 0.172566372 0.413793103 0.623893805 145 11 2 213 3L:12403062-12403240 6 102 1141 FBgn0052103 1942.393333 66.43 101.62 0.052512536 1.535450851 1.003739421 7 -6 0.5 0.25 dme-miR-1008-3p 6mer2-7 GCTGTG 3L 12403920 12403925 - 3L_12403920_12403925_- 0.999961717 0.999659821 0.999810769 0.000213476 CG32103 FBtr0075982|FBtr0332090|FBtr0075983|FBtr0332089 12403503|12402293|12403503|12403503 12404054|12404054|12404054|12404054 3L - 12403828 12403946 3'utr CG32103 FlyBase G36380.2 GCGGCTGGTGATCCGGCTGACGCTGTGCTCCATTTTGTATAGTAGTAGCGTTAGGTTAAGTCGGCTCGGTGGTCGCCACTCGCTCTCTGCCGCAATGAGACAGTCTCGTGCTGCTTCTT 70 12403923 0.898326283 26 67 440 0.963414634 1.897627091 0.170731707 0.142857143 0.268292683 70 3 0 79 3L:12403828-12403946 6 CG32103 FBtr0332089|FBtr0075983|FBtr0332090|FBtr0075982 12403503|12403503|12402293|12403503 12404054|12404054|12404054|12404054 GCTGTG 6mer2-7 dme-miR-1008-3p 3L - 12403783 12403948 3'utr CG32103 FlyBase G27485.1 GTGCGGCTGGTGATCCGGCTGACGCTGTGCTCCATTTTGTATAGTAGTAGCGTTAGGTTAAGTCGGCTCGGTGGTCGCCACTCGCTCTCTGCCGCAATGAGACAGTCTCGTGCTGCTTCTTTCCTTAAGTGTAAAGCAGGCCTCTTCCACGTTCTGGGTTATCCGT 100 12403923 0.885428329 29 92 636 0.909722222 1.640150041 0.201388889 0.32 0.527777778 100 11 2 131 3L:12403783-12403948 6 25.5 1142 FBgn0052103 1942.393333 66.43 101.62 0.013128134 0.383862713 0.250934855 -2 -2 -2 0.25 dme-miR-999-3p 6mer2-7 GTTAAC 3L 12404020 12404025 - 3L_12404020_12404025_- 0.999493687 0.960864256 0.980178971 0.027315111 CG32103 FBtr0075982|FBtr0332090|FBtr0075983|FBtr0332089 12403503|12402293|12403503|12403503 12404054|12404054|12404054|12404054 3L - 12403953 12404085 stop_codon CG32103 FlyBase G36381.1 GAGTCGCGCCCTGGGCATTAAGATGTCGTGAGATGTCTGTCTTAATCTCGTTCCAATCAGGTTAACTCGGCTCGGCCCGGCCACCTCGGCTCTGCGGCCCCGCTCTGCAGGGCGGATCGGGCTGCGGCCGGGA 34 12404024 0.969390692 16 32 179 0.955555556 1.633468456 0.2 0.235294118 0.422222222 34 2 0 43 3L:12403953-12404085 6 CG32103 FBtr0332089|FBtr0075983|FBtr0332090|FBtr0075982 12403503|12403503|12402293|12403503 12404054|12404054|12404054|12404054 GTTAAC 6mer2-7 dme-miR-999-3p 3L - 12403953 12404147 stop_codon CG32103 FlyBase G27486.1 ACGCCAAACTTCCTCAAGGTCCTGCCGGCGGTGTCCATCAGCTACGTGGTGTACGAGTATACGAGTCGCGCCCTGGGCATTAAGATGTCGTGAGATGTCTGTCTTAATCTCGTTCCAATCAGGTTAACTCGGCTCGGCCCGGCCACCTCGGCTCTGCGGCCCCGCTCTGCAGGGCGGATCGGGCTGCGGCCGGGA 40 12404024 0.958947606 19 31 177 0.830508475 1.389166084 0.152542373 0.35 0.559322034 40 9 1 49 3L:12403953-12404147 6 15 1143 FBgn0052103 1942.393333 66.43 101.62 0.007722432 0.225801596 0.147608738 -1 -1 -1 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 12492038 12492043 - 3L_12492038_12492043_- 0.892427793 0.999999867 0.94621383 0.076064961 CG10657 FBtr0075975 12491828 12492142 3L - 12492026 12492067 3'utr CG10657 FlyBase G36406.1 AAGACGCGCGGGCATGCACACTTCGTACCTATTTAAAAGCAT 14 12492036 0.981318448 3 12 91 0.857142857 1.079181246 0.142857143 0 0 14 2 0 12 3L:12492026-12492067 6 CG10657 FBtr0075975 12491828 12492142 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L - 12491978 12492068 3'utr CG10657 FlyBase G27511.1 CAAGACGCGCGGGCATGCACACTTCGTACCTATTTAAAAGCATCACCACTAAGTTGTATAACTACGGTCTCGCGGGAACTGTGACTCCCTC 7 12492046 0.977150911 6 7 46 1 1.041392685 0.545454545 0.428571429 0.636363636 7 0 0 11 3L:12491978-12492068 6 9 1144 FBgn0036289 3.616666667 0.283333333 0.423333333 2.488479263 31.76470588 21.25984252 -7 3 -2 0.25 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 1250109 1250115 + 3L_1250109_1250115_+ 0.821250291 0.820653633 0.820951962 0.000421931 Sac1 FBtr0303217|FBtr0072652 1250068|1250068 1250451|1250451 3L + 1250076 1250142 3'utr Sac1 FlyBase G26994.1 TGTCGTCTAGCAGAGTCACTGGGAACTACCTCTGCAGCTAAACTGTCCCATTGCTCCGAGAAAGAAC 16 1250108 0.963364916 5 15 80 0.941176471 1.204119983 0.294117647 0.0625 0.117647059 16 1 0 16 3L:1250076-1250142 7 Sac1 FBtr0303217|FBtr0072652 1250068|1250068 1250451|1250451 GCAGCTA 7mer-A1 dme-miR-980-3p 3L + 1250077 1250153 3'utr Sac1 FlyBase G20435.1 GTCGTCTAGCAGAGTCACTGGGAACTACCTCTGCAGCTAAACTGTCCCATTGCTCCGAGAAAGAACAATTGTAAACC 13 1250107 0.969472889 6 12 71 0.944444444 1.230448921 0.166666667 0.307692308 0.5 13 1 0 17 3L:1250077-1250153 7 12 1145 FBgn0035195 492.1933333 25.24666667 38.54333333 0.024380663 0.475310272 0.311337888 1 2 1.5 0.25 dme-miR-970-3p 7mer-m8 TCTTATG 3L 12505366 12505372 + 3L_12505366_12505372_+ 0.56529282 0.642482929 0.603887875 0.054581643 vih FBtr0075958 12505147 12505821 3L + 12505323 12505382 3'utr vih FlyBase G29767.1 CGTTCAATGCTGATAGTTCATTTGGCAAAAGACCCCGTGCGTTTCTTATGTAATTGTCGA 6 12505364 0.98410851 5 6 47 1 0.77815125 0.333333333 0 0 6 0 0 6 3L:12505323-12505382 7 vih FBtr0075958 12505147 12505821 TCTTATG 7mer-m8 dme-miR-970-3p 3L + 12505352 12505378 3'utr vih FlyBase G22535.1 AGACCCCGTGCGTTTCTTATGTAATTG 5 12505365 0.833956576 3 5 37 1 0.84509804 0.428571429 0.4 0.571428571 5 0 0 7 3L:12505352-12505378 7 4.5 1146 FBgn0264848 630.4033333 52.49 79.89666667 0.007138287 0.085730615 0.05632275 2 1 1.5 0.25 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 12505632 12505637 + 3L_12505632_12505637_+ 0.999788399 0.999806922 0.999797661 1.31E-05 vih FBtr0075958 12505147 12505821 3L + 12505604 12505650 3'utr vih FlyBase G29770.1 AAGCGACTATGCTGCTGCGCCGGCCATTATGTGAATGTTAGCTAATT 25 12505631 0.691748466 7 25 173 1 1.491361694 0.193548387 0.2 0.35483871 25 0 0 31 3L:12505604-12505650 6 vih FBtr0075958 12505147 12505821 ATGTGA 6mer3-8 dme-miR-1003-3p 3L + 12505594 12505648 3'utr vih FlyBase G22537.1 GATGATTTTTAAGCGACTATGCTGCTGCGCCGGCCATTATGTGAATGTTAGCTAA 18 12505639 0.627681633 7 17 120 0.96969697 1.505149978 0 0.444444444 0.696969697 18 1 0 32 3L:12505594-12505648 6 17.5 1147 FBgn0264848 630.4033333 52.49 79.89666667 0.027760005 0.333396837 0.219032918 1 -7 -3 0.25 dme-miR-932-5p 7mer-A1 GAATTGA 3L 12519225 12519231 + 3L_12519225_12519231_+ 0.7316583 0.731659022 0.731658661 4.95E-07 tral FBtr0332635|FBtr0332642|FBtr0332636|FBtr0332641|FBtr0332638|FBtr0332639|FBtr0332637|FBtr0332640|FBtr0075959 12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150 12520954|12519695|12519695|12519695|12519695|12519695|12520954|12519695|12519695 3L + 12519186 12519246 3'utr tral FlyBase G29788.1 ACACCAACCACAACCAACAAACCACAAATTGATAGATGCGAATTGAGAAGAGCGTAAAGTA 10 12519228 0.943966455 5 9 37 1 1.041392685 0.363636364 0.222222222 0.363636364 9 0 0 11 3L:12519186-12519246 7 tral FBtr0332639|FBtr0332637|FBtr0332640|FBtr0075959|FBtr0332635|FBtr0332636|FBtr0332642|FBtr0332641|FBtr0332638 12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150 12519695|12520954|12519695|12519695|12520954|12519695|12519695|12519695|12519695 GAATTGA 7mer-A1 dme-miR-932-5p 3L + 12519151 12519245 3'utr tral FlyBase G22544.1 GTGCCGCCCGGCCAGTGGAAAGCCACTTTAAATATACACCAACCACAACCAACAAACCACAAATTGATAGATGCGAATTGAGAAGAGCGTAAAGT 8 12519228 0.937618104 7 7 31 1 1.113943352 0.384615385 0.5 0.692307692 8 0 0 13 3L:12519151-12519245 7 6 1148 FBgn0041775 2554.613333 85.08333333 130.6233333 0.002348692 0.070519099 0.0459336 -3 -3 -3 0.25 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 12519509 12519514 + 3L_12519509_12519514_+ 0.774073684 0.423434057 0.598753871 0.247939639 tral FBtr0332635|FBtr0332642|FBtr0332636|FBtr0332641|FBtr0332638|FBtr0332639|FBtr0332637|FBtr0332640|FBtr0075959 12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150 12520954|12519695|12519695|12519695|12519695|12519695|12520954|12519695|12519695 3L + 12519463 12519526 3'utr tral FlyBase G29790.1 AGCGCTCTACGATTCGATTAATGATTAGCGACTAGCGCGAATGTGAATGTGAATGTGAACCGAA 24 12519509 0.966297742 10 22 121 0.925925926 1.096910013 0.444444444 0.125 0.222222222 24 1 1 25 3L:12519463-12519526 6 tral FBtr0332639|FBtr0332637|FBtr0332640|FBtr0075959|FBtr0332635|FBtr0332636|FBtr0332642|FBtr0332641|FBtr0332638 12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150 12519695|12520954|12519695|12519695|12520954|12519695|12519695|12519695|12519695 ATGTGA 6mer3-8 dme-miR-1003-3p 3L + 12519471 12519518 3'utr tral FlyBase G22547.1 ACGATTCGATTAATGATTAGCGACTAGCGCGAATGTGAATGTGAATGT 15 12519488 0.82186454 7 15 89 1 1.322219295 0.476190476 0.266666667 0.476190476 15 0 0 21 3L:12519471-12519518 6 14.5 1149 FBgn0041775 2554.613333 85.08333333 130.6233333 0.005676006 0.170421156 0.111006201 0 21 10.5 0.25 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 12519998 12520005 + 3L_12519998_12520005_+ 0.667896644 0.668274891 0.668085767 0.000267498 tral FBtr0332635|FBtr0332637 12519150|12519150 12520954|12520954 3L + 12519982 12520021 3'utr tral FlyBase G29795.1 AAAAGAAAATAAAATCGGCAGCTACGCGCTTCTATCAAAA 104 12519996 0.895315589 5 91 412 0.872 1.560305243 0.072 0.153846154 0.296 104 14 2 109 3L:12519982-12520021 8 tral FBtr0332637|FBtr0332635 12519150|12519150 12520954|12520954 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L + 12519981 12520026 3'utr tral FlyBase G22550.1 AAAAAGAAAATAAAATCGGCAGCTACGCGCTTCTATCAAAAGCACA 67 12519996 0.857844646 5 63 246 0.978947368 1.968482949 0.178947368 0.313432836 0.515789474 67 2 0 93 3L:12519981-12520026 8 84.5 1150 FBgn0041775 2554.613333 85.08333333 130.6233333 0.033077413 0.993143976 0.646898206 2 2 2 0.25 dme-bantam-3p 7mer-m8 TGATCTC 3L 12520197 12520203 + 3L_12520197_12520203_+ 0.656568833 0.661398474 0.658983654 0.003415114 tral FBtr0332635|FBtr0332637 12519150|12519150 12520954|12520954 3L + 12520159 12520222 3'utr tral FlyBase G29796.1 AAGCCCAAATTTTCGGTTTTCGTACAGTTTATTTTCTCTGATCTCGGTTGGGCAAGGGAAATTA 88 12520197 0.99033327 8 82 827 0.922330097 1.67669361 0.27184466 0.125 0.252427184 88 7 1 95 3L:12520159-12520222 7 tral FBtr0332637|FBtr0332635 12519150|12519150 12520954|12520954 TGATCTC 7mer-m8 dme-bantam-3p 3L + 12520172 12520231 3'utr tral FlyBase G22551.1 CGGTTTTCGTACAGTTTATTTTCTCTGATCTCGGTTGGGCAAGGGAAATTATACTTACGA 50 12520197 0.978167442 8 46 513 0.898734177 1.550228353 0.443037975 0.42 0.632911392 50 7 1 71 3L:12520172-12520231 7 68 1151 FBgn0041775 2554.613333 85.08333333 130.6233333 0.02661851 0.799216454 0.520580805 0 0 0 0.25 dme-miR-2a-2-5p 6mer3-8 TGATGA 3L 12520266 12520271 + 3L_12520266_12520271_+ 0.971065872 0.925893426 0.948479649 0.031941781 tral FBtr0332635|FBtr0332637 12519150|12519150 12520954|12520954 3L + 12520243 12520329 3'utr tral FlyBase G29797.1 TTGAAAAGATACGATACCTATGGTGATGATGTTCTCAATGTAAATGTTAAGATTGATTGTGTGATTCACTGGCTGCTGCGCTTGAAA 41 12520271 0.737726945 12 36 333 0.894736842 1.707570176 0.333333333 0.341463415 0.526315789 41 6 0 51 3L:12520243-12520329 6 tral FBtr0332637|FBtr0332635 12519150|12519150 12520954|12520954 TGATGA 6mer3-8 dme-miR-2a-2-5p 3L + 12520247 12520327 3'utr tral FlyBase G22552.1 AAAGATACGATACCTATGGTGATGATGTTCTCAATGTAAATGTTAAGATTGATTGTGTGATTCACTGGCTGCTGCGCTTGA 45 12520270 0.721657385 13 40 387 0.87654321 1.152288344 0.37037037 0.444444444 0.691358025 45 6 4 71 3L:12520247-12520327 6 30 1152 FBgn0041775 2554.613333 85.08333333 130.6233333 0.01174346 0.352595495 0.229668002 -5 -4 -4.5 0.25 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 12527471 12527477 - 3L_12527471_12527477_- 0.657409794 0.653888242 0.655649018 0.002490147 nst FBtr0075967 12527213 12527630 3L - 12527448 12527501 3'utr nst FlyBase G36463.1 ATTCTGCAAATGTTCACTGTCTTTTGTGTTCTAAAGATGACATATTTTTTGCCA 25 12527478 0.659621256 8 25 263 1 1.431363764 0.074074074 0.08 0.148148148 25 0 0 27 3L:12527448-12527501 7 nst FBtr0075967 12527213 12527630 TGTGTTC 7mer-m8 dme-miR-317-3p 3L - 12527434 12527632 stop_codon nst FlyBase G27549.1 AGAGCGGAATGACGAACTAACCTCTCACGGGAATCGACAATTGACACAGATCCTGGATGGAGCAATAAATCTCTTTACTCTAAGGTGCTCAATAACTTAAAAAAAAAACAACTTAACTCTCAAACGCATTTATTCTGCAAATGTTCACTGTCTTTTGTGTTCTAAAGATGACATATTTTTTGCCATTATTTATAAAGTT 42 12527478 0.985356046 20 39 326 0.967213115 1.770852012 0.196721311 0.30952381 0.524590164 42 2 0 59 3L:12527434-12527632 7 19 1153 FBgn0036298 243.65 13.55666667 20.85333333 0.07798071 1.401524465 0.91112532 1 1 1 0.25 dme-miR-184-3p 7mer-m8 TCCGTCC 3L 12530631 12530637 - 3L_12530631_12530637_- 0.468402119 0.465496643 0.466949381 0.002054499 Tsf2 FBtr0075966 12530434 12530747 3L - 12530554 12530742 3'utr Tsf2 FlyBase G36473.2 TAGACTCACTTAGATTTCAGAATTCTACAAGCATCTCTAGCACAAAGAGAAAACATATCAACATTTTTACATTCCAAATATGATTAAGTTAAATGTGAAATCCCTTCCGTCCGAAAATGAAACTCTAACTAGCCGAAAAATATCTGTTGAAGGCTATAGTTTATAATTTATAAAGTCCTGTGCCTTATT 1471 12530638 0.902688607 34 1430 6990 0.982896847 2.565611725 0.631747728 0.205982325 0.375734901 1471 28 4 1839 3L:12530554-12530742 7 Tsf2 FBtr0075966 12530434 12530747 TCCGTCC 7mer-m8 dme-miR-184-3p 3L - 12530609 12530744 3'utr Tsf2 FlyBase G27552.3 ACTAGACTCACTTAGATTTCAGAATTCTACAAGCATCTCTAGCACAAAGAGAAAACATATCAACATTTTTACATTCCAAATATGATTAAGTTAAATGTGAAATCCCTTCCGTCCGAAAATGAAACTCTAACTAGCC 1090 12530638 0.936300892 17 1075 4916 0.981976383 2.420505837 0.617153511 0.351376147 0.560596644 1090 24 5 1580 3L:12530609-12530744 7 1192 1154 FBgn0036299 169.6666667 7.166666667 11.03333333 7.025540275 166.3255814 108.0362538 1 1 1 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 3L 12741211 12741217 + 3L_12741211_12741217_+ 0.424451856 0.413135501 0.418793678 0.008001903 Ptp69D FBtr0075914|FBtr0075913 12740996|12740996 12741568|12741568 3L + 12741178 12741237 3'utr Ptp69D FlyBase G29833.1 AATGTAGTGTATACGTATCGTATTGATAAAACTACCAAAGGAAAATAAGTAACATATTTT 78 12741210 0.966222122 5 77 212 0.978494624 1.959041392 0.010752688 0.153846154 0.290322581 78 2 0 91 3L:12741178-12741237 7 Ptp69D FBtr0075914|FBtr0075913 12740996|12740996 12741568|12741568 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 12741193 12741224 3'utr Ptp69D FlyBase G22576.1 TATCGTATTGATAAAACTACCAAAGGAAAATA 53 12741210 0.954896332 3 51 117 0.95890411 1.367976785 0.01369863 0.339622642 0.520547945 53 1 2 70 3L:12741193-12741224 7 64.5 1155 FBgn0014007 2746.713333 63.97333333 98.05 0.023482611 1.008232597 0.657827639 1 1 1 0.25 dme-miR-305-3p 6mer3-8 ATGTGC 3L 12746555 12746560 + 3L_12746555_12746560_+ 0.999999932 0.999982766 0.999991349 1.21E-05 CG32109 FBtr0075918 12746477 12746770 3L + 12746525 12746582 3'utr CG32109 FlyBase G29838.1 AATAATAAATGTTAAGCTGATTCCACTGTAATGTGCTATATCTGGTCCGTATTTTTGG 24 12746557 0.997597545 8 11 234 0.53125 0.929418926 0.09375 0.25 0.4375 24 14 1 17 3L:12746525-12746582 6 CG32109 FBtr0075918 12746477 12746770 ATGTGC 6mer3-8 dme-miR-305-3p 3L + 12746534 12746574 3'utr CG32109 FlyBase G22580.1 TGTTAAGCTGATTCCACTGTAATGTGCTATATCTGGTCCGT 14 12746556 0.998342382 5 6 133 0.3 0.954242509 0 0.714285714 0.866666667 14 21 0 9 3L:12746534-12746574 6 16.5 1156 FBgn0052109 192.0866667 22.89 35.27333333 0.085898726 0.720838794 0.467775468 -2 -1 -1.5 0.25 dme-miR-304-5p 8mer-A1 TGAGATTA 3L 12824572 12824579 + 3L_12824572_12824579_+ 0.624497405 0.62509295 0.624795177 0.000421082 CG42588 FBtr0304053|FBtr0301717 12824517|12824517 12824650|12824650 3L + 12824528 12824588 3'utr CG42588 FlyBase G29883.1 TGGAAACACACTGGTAACAGAAAATCTTCTGAACAAGCACCATCTGAGATTATAACTTATT 14 12824570 0.976945955 5 12 75 0.894736842 1.230448921 0 0.214285714 0.421052632 14 2 0 17 3L:12824528-12824588 8 CG42588 FBtr0301717|FBtr0304053 12824517|12824517 12824650|12824650 TGAGATTA 8mer-A1 dme-miR-304-5p 3L + 12824537 12824590 3'utr CG42588 FlyBase G22612.1 ACTGGTAACAGAAAATCTTCTGAACAAGCACCATCTGAGATTATAACTTATTGT 13 12824571 0.9810472 6 12 77 0.941176471 1.204119983 0 0.230769231 0.411764706 13 1 0 16 3L:12824537-12824590 8 10.5 1157 FBgn0260965 649.5 9.203333333 14.18 0.016166282 1.140890982 0.740479549 2 1 1.5 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 12852253 12852258 + 3L_12852253_12852258_+ 0.563406636 0.51276589 0.538086263 0.035808382 Wbp2 FBtr0273240|FBtr0273241|FBtr0332047 12852235|12852235|12852235 12853169|12853169|12853169 3L + 12852232 12852276 stop_codon Wbp2 FlyBase G29892.1 TGTAATTAAAAGCAAACTACTGTACCTCAAATAGCCATCCCGACA 37 12852252 0.654453339 4 37 153 1 1.662757832 0.152173913 0.189189189 0.347826087 37 0 0 46 3L:12852232-12852276 6 Wbp2 FBtr0332047|FBtr0273240|FBtr0273241 12852235|12852235|12852235 12853169|12853169|12853169 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 12852235 12852276 stop_codon Wbp2 FlyBase G22617.1 AATTAAAAGCAAACTACTGTACCTCAAATAGCCATCCCGACA 32 12852252 0.920082361 5 32 131 1 1.72427587 0.150943396 0.5 0.698113208 32 0 0 53 3L:12852235-12852276 6 34.5 1158 FBgn0036318 1204.006667 91.87 139.8366667 0.028654326 0.375530641 0.246716407 1 1 1 0.25 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 12894546 12894553 + 3L_12894546_12894553_+ 0.63836789 0.641865928 0.640116909 0.00247346 CG14118 FBtr0075870 12894495 12894758 3L + 12894528 12894564 3'utr CG14118 FlyBase G29896.1 TTTTAAGTGAGTGCAATAAAGACTGAGTGAGTTGTGT 18 12894544 0.872400093 3 17 87 0.947368421 1.255272505 0.736842105 0.055555556 0.105263158 18 1 0 18 3L:12894528-12894564 8 CG14118 FBtr0075870 12894495 12894758 AAGACTGA 8mer-A1 dme-miR-14-3p 3L + 12894529 12894566 3'utr CG14118 FlyBase G22619.1 TTTAAGTGAGTGCAATAAAGACTGAGTGAGTTGTGTGA 14 12894544 0.879132243 2 14 71 1 1.278753601 0.631578947 0.285714286 0.473684211 14 0 0 19 3L:12894529-12894566 8 16 1159 FBgn0036323 1 0.083333333 0.13 16 192 123.0769231 2 2 2 0.25 dme-miR-304-5p 8mer-A1 TGAGATTA 3L 1299857 1299864 + 3L_1299857_1299864_+ 0.378729853 0.395778702 0.387254277 0.012055322 scf FBtr0089941|FBtr0089942 1299832|1299832 1300389|1300389 3L + 1299831 1299963 stop_codon scf FlyBase G27015.1 TAGAGTGTCTAGATACCCAGAATCCCTGAGATTAAGATTGATCCTATGAATCTCCCACTTCGCATGCCAAATAACTTGTAATCTTGTCTAGCCCTTAAGACCTTAAGAAAGTGCATTATAAACCGACTCGAAT 587 1299862 0.890049899 29 559 3878 0.949712644 1.820201459 0.096264368 0.160136286 0.291666667 587 26 9 661 3L:1299831-1299963 8 scf FBtr0089941|FBtr0089942 1299832|1299832 1300389|1300389 TGAGATTA 8mer-A1 dme-miR-304-5p 3L + 1299711 1299961 stop_codon scf FlyBase G20453.1 GAGGCCGATGCGGACCACGATGATAAGTTGACAAAGGAGGAAATACTAGACAAGTACGACGTTTTCGTCGGCTCCCAGGCCACCGATTTCGGCGAGGCCTTGGCCCGCCACGATGAGTTCTAGAGTGTCTAGATACCCAGAATCCCTGAGATTAAGATTGATCCTATGAATCTCCCACTTCGCATGCCAAATAACTTGTAATCTTGTCTAGCCCTTAAGACCTTAAGAAAGTGCATTATAAACCGACTCGA 386 1299862 0.979498298 39 361 2483 0.942857143 1.845872874 0.090756303 0.383419689 0.6 386 27 7 561 3L:1299711-1299961 8 269.5 1160 FBgn0025682 1802 152.5933333 234.48 0.149556049 1.766132203 1.149351757 -5 -5 -5 0.25 dme-miR-14-3p 7mer-A1 AGACTGA 3L 13009226 13009232 + 3L_13009226_13009232_+ 0.821741524 0.822025521 0.821883523 0.000200818 CG14117 FBtr0306091|FBtr0332074 13009186|13008969 13009450|13009450 3L + 13009209 13009249 3'utr CG14117 FlyBase G29898.1 AATAACCCCAGATTTCGAGACTGATGGCTCAGAACGGATAT 36 13009223 0.616156631 5 36 185 1 1.591064607 0.102564103 0.055555556 0.128205128 36 0 0 39 3L:13009209-13009249 7 CG14117 FBtr0332074|FBtr0306091 13008969|13009186 13009450|13009450 AGACTGA 7mer-A1 dme-miR-14-3p 3L + 13009209 13009290 3'utr CG14117 FlyBase G22622.1 AATAACCCCAGATTTCGAGACTGATGGCTCAGAACGGATATGCGTCAAATTAAACGAGGATGTAGCCTTTAGCTATTTAGTT 38 13009233 0.905760003 8 38 207 1 1.77815125 0.183333333 0.342105263 0.583333333 38 0 0 60 3L:13009209-13009290 7 32 1161 FBgn0036331 82 9.843333333 15.15333333 0.390243902 3.250931256 2.11174659 3 -7 -2 0.25 dme-miR-999-3p 7mer-A1 GTTAACA 3L 13020168 13020174 - 3L_13020168_13020174_- 0.813292997 0.810850064 0.812071531 0.001727391 AdenoK FBtr0075895|FBtr0075896|FBtr0346531 13019980|13019980|13019713 13020289|13020289|13020289 3L - 13020160 13020202 3'utr AdenoK FlyBase G36606.1 AAGTAAATGAGAGTGACTAAAAGATTTTGTTAACACTGATAAT 27 13020175 0.662619382 6 26 215 0.971428571 1.531478917 0.257142857 0.222222222 0.4 27 1 0 34 3L:13020160-13020202 7 AdenoK FBtr0075896|FBtr0346531|FBtr0075895 13019980|13019713|13019980 13020289|13020289|13020289 GTTAACA 7mer-A1 dme-miR-999-3p 3L - 13020164 13020231 3'utr AdenoK FlyBase G27640.1 AAGCGCAGCAAGATTTGCAATTGTTAATTAAGTAAATGAGAGTGACTAAAAGATTTTGTTAACACTGA 19 13020175 0.983059798 6 18 153 0.941176471 1.505149978 0.117647059 0.631578947 0.794117647 19 2 0 32 3L:13020164-13020231 7 20 1162 FBgn0036337 473.9933333 36.92 56.63666667 0.042194686 0.541711809 0.353128127 1 1 1 0.25 dme-miR-980-3p 6mer2-7 GCAGCT 3L 1311764 1311769 - 3L_1311764_1311769_- 0.957637185 0.970067029 0.963852107 0.008789196 CG9186 FBtr0072728|FBtr0072727 1311717|1311717 1311929|1311929 3L - 1311720 1311900 3'utr CG9186 FlyBase G33267.1 AGCCCTGTCCATTACCTAATCCATCCATGCCAATAGACTTGGGAATCCGGATTACGGTTGAACAGCAAACCAATAGCAATTACTCCACTGCCTTTGTGTGGCAATTAGTTCGTTTTTATTAGTATCTTTTTGCAGCTCTCGAAGACAACTCTAAATATAGTCAAAAGTGATTTAACACGGT 78 1311771 0.883379304 21 78 564 1 2.037426498 0.036697248 0.307692308 0.504587156 78 0 0 109 3L:1311720-1311900 6 CG9186 FBtr0072728|FBtr0072727 1311717|1311717 1311929|1311929 GCAGCT 6mer2-7 dme-miR-980-3p 3L - 1311723 1311794 3'utr CG9186 FlyBase G25170.1 AGTTCGTTTTTATTAGTATCTTTTTGCAGCTCTCGAAGACAACTCTAAATATAGTCAAAAGTGATTTAACAC 26 1311771 0.789320498 5 26 207 1 1.591064607 0.051282051 0.384615385 0.58974359 26 0 0 39 3L:1311723-1311794 6 22 1163 FBgn0035206 326.0766667 28.00666667 42.93333333 0.067468796 0.785527255 0.51242236 2 2 2 0.25 dme-bantam-3p 6mer3-8 TGATCT 3L 13278505 13278510 + 3L_13278505_13278510_+ 0.987471029 0.964338899 0.975904964 0.016356865 caps FBtr0075832|FBtr0075833|FBtr0305480|FBtr0346864 13277310|13277310|13278030|13278123 13279642|13279642|13279642|13279642 3L + 13278465 13278553 3'utr caps FlyBase G29946.1 ATTGACCATCCTGCTGATCGGCCATTTAATTTGCATACAGTGATCTTAATATTTAGGTTATGCTTAAAAGCAGTTCAATTATTGTAAAT 106 13278510 0.991625236 15 92 1002 0.893129771 1.46612587 0.022900763 0.20754717 0.358778626 106 11 3 117 3L:13278465-13278553 6 caps FBtr0075832|FBtr0075833|FBtr0305480|FBtr0346864 13277310|13277310|13278030|13278123 13279642|13279642|13279642|13279642 TGATCT 6mer3-8 dme-bantam-3p 3L + 13278465 13278529 3'utr caps FlyBase G22666.1 ATTGACCATCCTGCTGATCGGCCATTTAATTTGCATACAGTGATCTTAATATTTAGGTTATGCTT 59 13278509 0.69590373 11 53 502 0.896551724 1.591064607 0.034482759 0.322033898 0.540229885 59 8 1 78 3L:13278465-13278529 6 72 1164 FBgn0023095 209.6666667 5.27 8.083333333 0.343402226 13.66223909 8.907216495 -5 -4 -4.5 0.25 dme-bantam-3p 6mer2-7 GATCTC 3L 1333330 1333335 - 3L_1333330_1333335_- 0.995685063 0.847913851 0.921799457 0.104490018 CG2211 FBtr0331866|FBtr0072723 1333237|1333237 1333416|1333416 3L - 1333287 1333388 3'utr CG2211 FlyBase G33271.1 ATTCAAACAGCCATGTTAGTCCAAACTTTCATATGGTATAAACTCCCTATTAAGATCTCGTTAAAACCACTGAAGACTTGAAATACGTGTAGTGCACTCTAA 77 1333328 0.968417021 14 69 557 0.902173913 1.220108088 0.141304348 0.155844156 0.293478261 77 5 4 83 3L:1333287-1333388 6 CG2211 FBtr0331866|FBtr0072723 1333237|1333237 1333416|1333416 GATCTC 6mer2-7 dme-bantam-3p 3L - 1333294 1333365 3'utr CG2211 FlyBase G25174.2 AACTTTCATATGGTATAAACTCCCTATTAAGATCTCGTTAAAACCACTGAAGACTTGAAATACGTGTAGTGC 62 1333328 0.924516305 11 62 379 1 1.954242509 0.055555556 0.322580645 0.533333333 62 0 0 90 3L:1333294-1333365 6 53 1165 FBgn0035211 37.72 2.756666667 4.2 1.405090138 19.2261185 12.61904762 -7 -7 -7 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 13386376 13386381 - 3L_13386376_13386381_- 0.764193844 0.998121195 0.881157519 0.165411651 CG10171 FBtr0075865|FBtr0075865|FBtr0075865|FBtr0075864|FBtr0075864|FBtr0075864 13385944|13385944|13385944|13386092|13386092|13386092 13386714|13386714|13386714|13386714|13386714|13386714 3L - 13386349 13386396 3'utr CG10171 FlyBase G36613.1 ATGACGTTGTTGTTACTGTGACTGTTCACCTCCATTTTGTGTATTAAC 16 13386372 0.98502915 6 16 130 1 1.301029996 0.5 0.1875 0.35 16 0 0 20 3L:13386349-13386396 6 CG10171 FBtr0075864|FBtr0075864|FBtr0075864|FBtr0075865|FBtr0075865|FBtr0075865 13386092|13386092|13386092|13385944|13385944|13385944 13386714|13386714|13386714|13386714|13386714|13386714 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 13386360 13386402 3'utr CG10171 FlyBase G27645.1 CGGATTATGACGTTGTTGTTACTGTGACTGTTCACCTCCATTT 17 13386373 0.700992705 6 16 151 1 1.447158031 0.428571429 0.411764706 0.642857143 17 0 0 28 3L:13386360-13386402 6 15 1166 FBgn0036353 70.39 4.823333333 7.333333333 0.213098451 3.109882516 2.045454545 -9 -8 -8.5 0.25 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 13483952 13483958 - 3L_13483952_13483958_- 0.395432209 0.402889111 0.39916066 0.005272825 Abp1 FBtr0075819 13483531 13484013 3L - 13483912 13483975 3'utr Abp1 FlyBase G36640.1 TAAATATCTACACCAATGCAGCTAGCAACTATATTTTGGATCCGGACTATAGCTACTTAAACAC 81 13483959 0.925631323 11 71 322 0.916666667 1.643452676 0.020833333 0.1875 0.322916667 80 7 1 88 3L:13483912-13483975 7 Abp1 FBtr0075819 13483531 13484013 GCAGCTA 7mer-A1 dme-miR-980-3p 3L - 13483936 13483990 3'utr Abp1 FlyBase G27663.2 GGGACGCCCTTTTGCTAAATATCTACACCAATGCAGCTAGCAACTATATTTTGGA 48 13483959 0.948217751 5 42 176 0.913580247 1.170261715 0.012345679 0.5 0.703703704 48 3 4 74 3L:13483936-13483990 7 53 1167 FBgn0036372 618.6666667 30.00333333 45.8 0.085668103 1.766470392 1.15720524 1 1 1 0.25 dme-miR-283-5p 8mer-A1 TGATATTA 3L 13509895 13509902 + 3L_13509895_13509902_+ 0.590783739 0.559706179 0.575244959 0.021975111 Spt20 FBtr0340705|FBtr0304904|FBtr0075812 13509797|13508879|13509797 13510695|13510695|13511541 3L + 13509871 13509914 3'utr Spt20 FlyBase G30001.1 GAAGGCTACGCGTTGTGTATTGCTTGATATTATAGTTTATGGTT 8 13509894 0.98605216 4 8 95 1 1 0 0.25 0.4 8 0 0 10 3L:13509871-13509914 8 Spt20 FBtr0075812|FBtr0304904|FBtr0340705 13509797|13508879|13509797 13511541|13510695|13510695 TGATATTA 8mer-A1 dme-miR-283-5p 3L + 13509837 13509912 3'utr Spt20 FlyBase G22707.1 CGACTGAGAGATGAAGCTATAGAGCGAACAAGTAGAAGGCTACGCGTTGTGTATTGCTTGATATTATAGTTTATGG 16 13509893 0.942297423 6 12 110 0.761904762 0.903089987 0.380952381 0.3125 0.476190476 16 4 1 16 3L:13509837-13509912 8 8 1168 FBgn0036374 444.0733333 7.2 11.05666667 0.018015043 1.111111111 0.723545372 1 2 1.5 0.25 dme-miR-34-5p 7mer-A1 ACTGCCA 3L 13515854 13515860 + 3L_13515854_13515860_+ 0.821261392 0.809875303 0.815568348 0.008051189 Liprin-beta FBtr0075813|FBtr0330342|FBtr0075814 13515759|13515759|13515759 13516276|13516276|13516276 3L + 13515770 13515875 3'utr Liprin-beta FlyBase G30022.1 CGAAAGGAGCACAAATCGATTGAAAGCAAATATGTTTTTTAGTTGTAAGCCCAAAACCTGGCCAAGGATCCCCAAACTGAATGAACTGCCACCTGAACCAATTATG 59 13515851 0.973035859 16 53 319 0.918918919 1.832508913 0.324324324 0.186440678 0.351351351 59 6 0 68 3L:13515770-13515875 7 Liprin-beta FBtr0330342|FBtr0075814|FBtr0075813 13515759|13515759|13515759 13516276|13516276|13516276 ACTGCCA 7mer-A1 dme-miR-34-5p 3L + 13515771 13515868 3'utr Liprin-beta FlyBase G22720.1 GAAAGGAGCACAAATCGATTGAAAGCAAATATGTTTTTTAGTTGTAAGCCCAAAACCTGGCCAAGGATCCCCAAACTGAATGAACTGCCACCTGAACC 43 13515851 0.975870382 9 38 237 0.892307692 1.763427994 0.307692308 0.325581395 0.553846154 43 7 0 58 3L:13515771-13515868 7 27.5 1169 FBgn0036376 801.8733333 34.78666667 53.21666667 0.034294693 0.790532771 0.516755402 3 3 3 0.25 dme-miR-980-5p 8mer-A1 GAAAAACA 3L 1352108 1352115 + 3L_1352108_1352115_+ 0.585653986 0.614305983 0.599979984 0.020260023 CG9166 FBtr0072680 1352030 1352853 3L + 1352079 1352110 3'utr CG9166 FlyBase G27073.1 ACGTGCGAGATCACTTGCAGTGTGATTTGGAA 19 1352105 0.781300346 2 18 126 0.962962963 1.414973348 0.222222222 0.210526316 0.444444444 19 1 0 26 3L:1352079-1352110 3 CG9166 FBtr0072680 1352030 1352853 GAAAAACA 8mer-A1 dme-miR-980-5p 3L + 1352080 1352110 3'utr CG9166 FlyBase G20493.1 CGTGCGAGATCACTTGCAGTGTGATTTGGAA 11 1352106 0.791903675 3 11 71 1 1.230448921 0.411764706 0.454545455 0.647058824 11 0 0 17 3L:1352080-1352110 3 13.5 1170 FBgn0029514 63.66666667 7.47 11.33666667 0.212041885 1.807228916 1.190826228 3 2 2.5 0.25 dme-miR-11-3p 8mer-m1 CTGTGATG 3L 13934344 13934351 + 3L_13934344_13934351_+ 0.461488233 0.461173792 0.461331013 0.000222314 Gl FBtr0075756 13934192 13934656 3L + 13934314 13934361 3'utr Gl FlyBase G30055.1 AATAACACAGCTCCTCAAGACTCCCTGCTCCTGTGATGTGACCTAAAC 102 13934341 0.696635919 10 99 772 0.956521739 1.740362689 0.113043478 0.117647059 0.217391304 102 4 1 110 3L:13934314-13934361 8 Gl FBtr0075756 13934192 13934656 CTGTGATG 8mer-m1 dme-miR-11-3p 3L + 13934316 13934361 3'utr Gl FlyBase G22738.1 TAACACAGCTCCTCAAGACTCCCTGCTCCTGTGATGTGACCTAAAC 51 13934342 0.670338775 6 46 368 0.921052632 1.367976785 0.118421053 0.352941176 0.565789474 51 4 2 70 3L:13934316-13934361 8 75 1171 FBgn0001108 959.94 25.44 38.93 0.078129883 2.948113208 1.926534806 3 2 2.5 0.25 dme-miR-184-5p 8mer-A1 TGATAAGA 3L 13972269 13972276 + 3L_13972269_13972276_+ 0.391441388 0.395653543 0.393547466 0.002978404 ssp2 FBtr0346645 13971662 13973067 3L + 13972181 13972278 3'utr ssp2 FlyBase G30078.1 TAACGAATATACAATAAGATCCTGCTCAGTGGCCACTAAACCACAAAAAAAAAGGAACGTATAAAACCAAACTGAAATTGATAGTAACTGATAAGAGT 26 13972256 0.971456671 10 21 124 0.838709677 1.414973348 0.193548387 0.115384615 0.258064516 26 5 0 26 3L:13972181-13972278 8 ssp2 FBtr0346645 13971662 13973067 TGATAAGA 8mer-A1 dme-miR-184-5p 3L + 13972232 13972285 3'utr ssp2 FlyBase G22754.1 AAGGAACGTATAAAACCAAACTGAAATTGATAGTAACTGATAAGAGTATTGAGA 11 13972260 0.962646606 4 9 54 0.952380952 1.301029996 0.476190476 0.636363636 0.80952381 11 1 0 20 3L:13972232-13972285 8 9.5 1172 FBgn0036389 1101.49 30.04333333 45.97333333 0.008624681 0.316209919 0.206641531 13 9 11 0.25 dme-miR-980-5p 7mer-A1 AAAAACA 3L 13997983 13997989 + 3L_13997983_13997989_+ 0.734414494 0.699502524 0.716958509 0.024686512 CG17361 FBtr0075767 13997837 13998055 3L + 13997957 13998041 3'utr CG17361 FlyBase G30098.1 TGAAAGTACATATGGAGTGTAGTTTTAAAAACAATTTCATGTTCTCATATTGACAATAAGATAATAAAGAAATGATAATCGGATC 46 13997995 0.990520245 13 41 413 0.883333333 1.72427587 0.3 0.217391304 0.4 46 7 0 53 3L:13997957-13998041 7 CG17361 FBtr0075767 13997837 13998055 AAAAACA 7mer-A1 dme-miR-980-5p 3L + 13997915 13998019 3'utr CG17361 FlyBase G22765.1 TTCGATATATTTTTAAAGTAGAAACAAGTTAGCGACTAATAATGAAAGTACATATGGAGTGTAGTTTTAAAAACAATTTCATGTTCTCATATTGACAATAAGATA 38 13997995 0.96893913 14 34 345 0.921568627 1.371067862 0.235294118 0.289473684 0.470588235 38 3 1 47 3L:13997915-13998019 7 31 1173 FBgn0036395 38.90333333 5.8 9.033333333 0.796846885 5.344827586 3.431734317 -12 -12 -12 0.25 dme-miR-965-3p 7mer-m8 TACGCTT 3L 13999609 13999615 - 3L_13999609_13999615_- 0.612932391 0.61260302 0.612767706 0.000232921 CG8783 FBtr0333025|FBtr0075786|FBtr0075785 13999378|13999378|13999378 13999734|13999734|13999734 3L - 13999592 13999638 3'utr CG8783 FlyBase G36691.1 AAAGTTTGCGAAGCAAATCAATTTACGCTTGTAGACTACATATTTTG 142 13999616 0.758056456 6 142 1141 1 2.201397124 0.213836478 0.105633803 0.201257862 142 0 0 159 3L:13999592-13999638 7 CG8783 FBtr0075786|FBtr0075785|FBtr0333025 13999378|13999378|13999378 13999734|13999734|13999734 TACGCTT 7mer-m8 dme-miR-965-3p 3L - 13999595 13999639 3'utr CG8783 FlyBase G27698.1 TAAAGTTTGCGAAGCAAATCAATTTACGCTTGTAGACTACATATT 82 13999616 0.75354898 5 81 636 0.992248062 2.10720997 0.317829457 0.390243902 0.612403101 82 1 0 128 3L:13999595-13999639 7 112 1174 FBgn0036397 101 5.286666667 8.043333333 1.108910891 21.18537201 13.92457522 1 1 1 0.25 dme-miR-282-5p 6mer3-8 AGAGGC 3L 14019021 14019026 + 3L_14019021_14019026_+ 0.907669397 0.923433955 0.915551676 0.011147256 upSET FBtr0075768|FBtr0333050 14017876|14017876 14020148|14020148 3L + 14018767 14019122 3'utr upSET FlyBase G30159.1 ATTTAAAACACATTACCTAGTACAGAACTTGGCAAATAATACAAACTGTAATTGTTAGAGAGACCAGCGAAAACAAAATCCGGAACTAACAAAATTGTAAATAATATTTTTAAAACCCAAACATGAGCAACCAAAAGGATGAAAGTAAAAACTACTTGTCTTATTAAGCAAGTTAGTTAAGTAAGTTAAAAAGAGTACAAAGCGAGGGTTAATTGATTGAAATTATGCTAATGGATCGCATTAAAATTGTAAATAGAGGCAGCAACAGAAAGTGTCCGTAGCCATTTTCGTATATAGGCTTAATTATTTTAATCTTTCGAATTTCGTCTAAAGTAAAATATTCACAAATTAATTGT 108 14019019 0.9727426 37 100 601 0.932835821 2.096910013 0.186567164 0.175925926 0.335820896 108 9 0 125 3L:14018767-14019122 6 upSET FBtr0333050|FBtr0075768 14017876|14017876 14020148|14020148 AGAGGC 6mer3-8 dme-miR-282-5p 3L + 14018846 14019047 3'utr upSET FlyBase G22808.1 CCGGAACTAACAAAATTGTAAATAATATTTTTAAAACCCAAACATGAGCAACCAAAAGGATGAAAGTAAAAACTACTTGTCTTATTAAGCAAGTTAGTTAAGTAAGTTAAAAAGAGTACAAAGCGAGGGTTAATTGATTGAAATTATGCTAATGGATCGCATTAAAATTGTAAATAGAGGCAGCAACAGAAAGTGTCCGTAG 51 14019019 0.974266107 18 40 212 0.911392405 1.556302501 0.164556962 0.431372549 0.632911392 51 6 1 72 3L:14018846-14019047 6 21.5 1175 FBgn0036398 2404.643333 22.86666667 35.16333333 0.008941035 0.940233236 0.611432363 2 2 2 0.25 dme-miR-970-3p 8mer-A1 TCTTATGA 3L 14021058 14021065 - 3L_14021058_14021065_- 0.628964011 0.628210424 0.628587217 0.000532876 ptip FBtr0075784 14020313 14021220 3L - 14020930 14021106 3'utr ptip FlyBase G36703.1 CGCAATGTCATTGGCCATTGATGTTGTAGGCCGCGCCAATTTCTTATGATATACCAACGCGAAACTAGTCCATAGAGTTCGTCAATTCAATCGGGCATGCCGGAACGAATGAGTTTATAGGGTCTCGGGCACATCGGCATATCGGTCACAGCTAGACAAATTTATTGCATCCCCCTA 82 14021066 0.981844784 15 79 588 0.956521739 1.944482672 0.358695652 0.109756098 0.206521739 82 4 0 88 3L:14020930-14021106 8 ptip FBtr0075784 14020313 14021220 TCTTATGA 8mer-A1 dme-miR-970-3p 3L - 14020997 14021088 3'utr ptip FlyBase G27705.1 TGATGTTGTAGGCCGCGCCAATTTCTTATGATATACCAACGCGAAACTAGTCCATAGAGTTCGTCAATTCAATCGGGCATGCCGGAACGAAT 32 14021066 0.999759654 7 31 195 0.955555556 1.633468456 0.177777778 0.28125 0.488888889 32 2 0 43 3L:14020997-14021088 8 40 1176 FBgn0052133 645.9666667 9.623333333 14.77 0.0619227 4.156563907 2.708192282 1 1 1 0.25 dme-bantam-3p 7mer-A1 GATCTCA 3L 14052405 14052411 + 3L_14052405_14052411_+ 0.815416484 0.815721018 0.815568751 0.000215314 CG6833 FBtr0302433|FBtr0075774 14052207|14052207 14052469|14052469 3L + 14052392 14052422 3'utr CG6833 FlyBase G30205.1 AAAAGCAGGCTCGGATCTCATGATGAAACCA 17 14052412 0.680372651 3 15 65 0.954545455 1.322219295 0.181818182 0.235294118 0.409090909 17 1 0 21 3L:14052392-14052422 7 CG6833 FBtr0302433|FBtr0075774 14052207|14052207 14052469|14052469 GATCTCA 7mer-A1 dme-bantam-3p 3L + 14052393 14052420 3'utr CG6833 FlyBase G22843.1 AAAGCAGGCTCGGATCTCATGATGAAAC 19 14052412 0.65185109 2 19 71 1 1.397940009 0.32 0.315789474 0.48 19 0 0 25 3L:14052393-14052420 7 18 1177 FBgn0036405 208.48 21.87 33.59 0.086339217 0.823045267 0.535873772 -7 -7 -7 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3L 14070252 14070258 + 3L_14070252_14070258_+ 0.356831623 0.25973887 0.308285246 0.068654907 CG32138 FBtr0075776|FBtr0075775|FBtr0114573|FBtr0334053 14070133|14070133|14070133|14069144 14070369|14070369|14071583|14070369 3L + 14070143 14070329 3'utr CG32138 FlyBase G30241.1 ACGAGATAGAGATCGACGCAATGACGACGACGGGGCAATGGCAACGAATCGAAAATCAAAATTCACACTGAAACCGAAACAAAAAGAGAACATTACAGATACTGCAATATGTGATTAGGCGATTAAATTGTTTTCGAGACACTCTTACACATACACAAATTCACATTCCCTTTTATGCAAATCCTTA 3892 14070258 0.983714556 28 3721 28137 0.96001729 2.267367313 0.208126216 0.156731757 0.290685109 3892 162 23 4442 3L:14070143-14070329 7 CG32138 FBtr0334053|FBtr0114573|FBtr0075775|FBtr0075776 14069144|14070133|14070133|14070133 14070369|14071583|14070369|14070369 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 14070144 14070333 3'utr CG32138 FlyBase G22873.1 CGAGATAGAGATCGACGCAATGACGACGACGGGGCAATGGCAACGAATCGAAAATCAAAATTCACACTGAAACCGAAACAAAAAGAGAACATTACAGATACTGCAATATGTGATTAGGCGATTAAATTGTTTTCGAGACACTCTTACACATACACAAATTCACATTCCCTTTTATGCAAATCCTTATATT 2356 14070258 0.980988992 30 2208 16293 0.943160691 2.152410664 0.225232404 0.40959253 0.630544489 2356 190 24 3551 3L:14070144-14070333 7 2967 1178 FBgn0267795 5755.37 129.1033333 198.11 0.515518551 22.98159097 14.97652819 -6 -6 -6 0.25 dme-miR-92b-3p 6mer3-8 GTGCAA 3L 143868 143873 + 3L_143868_143873_+ 0.673556157 0.713999399 0.693777778 0.028597661 Pdk1 FBtr0072464|FBtr0072470|FBtr0072467|FBtr0072471|FBtr0072466|FBtr0072465|FBtr0333218 143819|143819|143819|143819|143819|143819|143819 144642|145293|145293|145293|145293|144642|145895 3L + 143737 144054 stop_codon Pdk1 FlyBase G26662.1 CAAGCTTCGACGGCGTCTGACAACCGGACATTGGGTAGCACCAGAACGGGGACGTCACCTAGCAAGAAGACGGCGTCTAAGTAAACGTAGTCCTATTTATAGCAATGTGAAATTAATTTAGTTGAAATTTAGTGCAAACGAAGCGATGGCGTAGAAGAGGGCGGGAATAGAAGTAAGCTTAGAAGTAGAAGTAAGTGATGAAGGGGAAATAATGATCGTGTCTCTAGTGCTAATTAGAACCAAATTTCTGTTTTCCGATTTGTATTGTGCTTAGGGCGAAAATATAACACTAGAATAAACTTATCTAAAGTAAAATAC 336 143865 0.981656492 48 321 2349 0.955380577 1.782950133 0.367454068 0.119047619 0.223097113 336 12 5 364 3L:143737-144054 6 Pdk1 FBtr0333218|FBtr0072468|FBtr0072470|FBtr0072466|FBtr0072465|FBtr0072464|FBtr0072469|FBtr0072467|FBtr0072471 143819|143819|143819|143819|143819|143819|143819|143819|143819 145895|144054|145293|145293|144642|144642|144054|145293|145293 GTGCAA 6mer3-8 dme-miR-92b-3p 3L + 143815 143909 stop_codon Pdk1 FlyBase G20164.1 AAGTAAACGTAGTCCTATTTATAGCAATGTGAAATTAATTTAGTTGAAATTTAGTGCAAACGAAGCGATGGCGTAGAAGAGGGCGGGAATAGAAG 169 143865 0.976748223 12 158 1070 0.930041152 1.752048448 0.440329218 0.343195266 0.543209877 169 14 3 226 3L:143815-143909 6 168.5 1179 FBgn0020386 1614.923333 45.11666667 69.42333333 0.104339318 3.734761729 2.42713785 3 3 3 0.25 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 14541397 14541404 - 3L_14541397_14541404_- 0.558073772 0.557512186 0.557792979 0.000397111 Gbs-70E FBtr0333037|FBtr0075724 14540935|14541044 14542118|14542118 3L - 14541352 14541432 3'utr Gbs-70E FlyBase G36754.1 TTTTATCTTTTTGGTTACTTGAAACGCTAAGACTGAAATGGCTTGTTATGGAGAAGAAAACACGTCCTGCAATACATTATA 403 14541405 0.934959122 14 377 2083 0.931623932 1.794388449 0.162393162 0.141439206 0.260683761 403 26 6 436 3L:14541352-14541432 8 Gbs-70E FBtr0075724|FBtr0333037 14541044|14540935 14542118|14542118 AAGACTGA 8mer-A1 dme-miR-14-3p 3L - 14541350 14541420 3'utr Gbs-70E FlyBase G27745.1 GGTTACTTGAAACGCTAAGACTGAAATGGCTTGTTATGGAGAAGAAAACACGTCCTGCAATACATTATATA 261 14541405 0.91487113 10 236 1092 0.908641975 1.963787827 0.187654321 0.390804598 0.607407407 261 34 3 368 3L:14541350-14541420 8 317 1180 FBgn0036428 388.9433333 16.83333333 25.64666667 0.815028753 18.83168317 12.36028074 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 14541698 14541703 - 3L_14541698_14541703_- 0.649626033 0.64956873 0.649597382 4.05E-05 Gbs-70E FBtr0333037|FBtr0333037|FBtr0333037|FBtr0075724|FBtr0075724|FBtr0075724|FBtr0075723|FBtr0075723|FBtr0075723 14540935|14540935|14540935|14541044|14541044|14541044|14541535|14541535|14541535 14542118|14542118|14542118|14542118|14542118|14542118|14542118|14542118|14542118 3L - 14541662 14541741 3'utr Gbs-70E FlyBase G36756.1 TTGGAAAAGATAGATTTATATGTTTACCTGTATGCCTGTGTGATCGTCTACATCTATATAACTGATACTAGATTTATGTT 30 14541705 0.863588096 9 27 255 0.906976744 1.290034611 0.046511628 0.3 0.511627907 30 3 1 39 3L:14541662-14541741 6 Gbs-70E FBtr0075723|FBtr0075723|FBtr0075723|FBtr0075724|FBtr0075724|FBtr0075724|FBtr0333037|FBtr0333037|FBtr0333037 14541535|14541535|14541535|14541044|14541044|14541044|14540935|14540935|14540935 14542118|14542118|14542118|14542118|14542118|14542118|14542118|14542118|14542118 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 14541653 14541716 3'utr Gbs-70E FlyBase G27747.1 ACCTGTATGCCTGTGTGATCGTCTACATCTATATAACTGATACTAGATTTATGTTAACTAAAAA 16 14541705 0.759781657 10 16 134 1 1.342422681 0.045454545 0.125 0.363636364 16 0 0 22 3L:14541653-14541716 6 14.5 1181 FBgn0036428 388.9433333 16.83333333 25.64666667 0.037280495 0.861386139 0.565375617 2 2 2 0.25 dme-miR-305-3p 8mer-A1 ATGTGCCA 3L 14541904 14541911 - 3L_14541904_14541911_- 0.581332986 0.581664484 0.581498735 0.000234406 Gbs-70E FBtr0333037|FBtr0075724|FBtr0075723 14540935|14541044|14541535 14542118|14542118|14542118 3L - 14541882 14541950 3'utr Gbs-70E FlyBase G36757.1 TGACCTAAGCTAATACCCGGTACAAATATCCCAATTTTAATGTGCCATTGACTTGAGGTTTACTCAATA 15 14541901 0.896376721 4 12 108 0.833333333 0.875061263 0 0.2 0.333333333 15 2 1 15 3L:14541882-14541950 8 Gbs-70E FBtr0075723|FBtr0075724|FBtr0333037 14541535|14541044|14540935 14542118|14542118|14542118 ATGTGCCA 8mer-A1 dme-miR-305-3p 3L - 14541861 14541913 3'utr Gbs-70E FlyBase G27748.1 TAATGTGCCATTGACTTGAGGTTTACTCAATATAAAATGAGATAGGAGGGCTT 12 14541896 0.985621338 8 11 82 0.894736842 1.230448921 0 0.5 0.684210526 12 2 0 17 3L:14541861-14541913 8 9 1182 FBgn0036428 388.9433333 16.83333333 25.64666667 0.023139618 0.534653465 0.350922797 -10 -15 -12.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 1467677 1467683 + 3L_1467677_1467683_+ 0.726704341 0.72675382 0.726729081 3.50E-05 rho FBtr0333207|FBtr0333207|FBtr0333207|FBtr0072694|FBtr0072694|FBtr0072694 1467352|1467352|1467352|1467352|1467352|1467352 1468944|1468944|1468944|1468475|1468475|1468475 3L + 1467651 1467702 3'utr rho FlyBase G27090.1 CGAAGCCGAAACGTGTAAACAAATGTTGTGATAGAACCAAAGACTGAATTTA 65 1467675 0.842953324 5 60 354 0.936708861 1.568201724 0 0.2 0.341772152 65 4 1 74 3L:1467651-1467702 7 rho FBtr0333207|FBtr0333207|FBtr0333207|FBtr0072694|FBtr0072694|FBtr0072694 1467352|1467352|1467352|1467352|1467352|1467352 1468944|1468944|1468944|1468475|1468475|1468475 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 1467657 1467703 3'utr rho FlyBase G20508.1 CGAAACGTGTAAACAAATGTTGTGATAGAACCAAAGACTGAATTTAT 60 1467674 0.829437338 7 56 327 0.94047619 1.897627091 0.023809524 0.3 0.5 60 5 0 79 3L:1467657-1467703 7 62.5 1183 FBgn0004635 880.87 41.8 65 0.070952581 1.495215311 0.961538462 2 3 2.5 0.25 dme-miR-317-3p 8mer-A1 TGTGTTCA 3L 14752740 14752747 - 3L_14752740_14752747_- 0.630866131 0.630945112 0.630905621 5.59E-05 Trl FBtr0075707|FBtr0075706 14747927|14750240 14752905|14752905 3L - 14752726 14752795 5'utr Trl FlyBase G36795.1 ATAACAATCAGCAAACAAACAAATTCCCCGTGATCTGATCGAATGATTTGTGTTCATTTCCTGTATCATT 294 14752748 0.637609015 11 286 2205 0.971590909 2.534026106 0.09375 0.173469388 0.309659091 294 10 0 342 3L:14752726-14752795 8 Trl FBtr0075706|FBtr0075707 14750240|14747927 14752905|14752905 TGTGTTCA 8mer-A1 dme-miR-317-3p 3L - 14752723 14752828 5'utr Trl FlyBase G27776.1 AAAAAACATAACACTCACAAAAACGATTTGTAAATAACAATCAGCAAACAAACAAATTCCCCGTGATCTGATCGAATGATTTGTGTTCATTTCCTGTATCATTTTT 243 14752748 0.98289456 13 237 1790 0.975903614 2.209515015 0.135542169 0.308641975 0.493975904 243 7 1 324 3L:14752723-14752828 8 103.5 1184 FBgn0013263 1897.606667 85.71333333 130.6566667 0.054542388 1.207513417 0.792152461 1 1 1 0.25 dme-miR-970-3p 6mer3-8 TCTTAT 3L 14766593 14766598 + 3L_14766593_14766598_+ 0.984415458 0.979797747 0.982106602 0.003265278 CG9384 FBtr0333044|FBtr0075690 14765702|14765702 14767703|14767703 3L + 14766564 14766619 3'utr CG9384 FlyBase G30301.1 AGTGATTAAGAATCTCGAACCCGCTGAAATCTTATCGATCAATTAAGAATTAAGAA 7 14766596 0.975953937 5 6 34 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3L:14766564-14766619 6 CG9384 FBtr0333044|FBtr0075690 14765702|14765702 14767703|14767703 TCTTAT 6mer3-8 dme-miR-970-3p 3L + 14766563 14766601 3'utr CG9384 FlyBase G22917.1 AAGTGATTAAGAATCTCGAACCCGCTGAAATCTTATCGA 6 14766595 0.961214724 5 6 27 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 3L:14766563-14766601 6 4 1185 FBgn0036446 489.33 13.20333333 20.20333333 0.008174443 0.3029538 0.197987131 -3 -2 -2.5 0.25 dme-miR-308-3p 8mer-m1 CTGTGATT 3L 14766856 14766863 + 3L_14766856_14766863_+ 0.385470865 0.384280041 0.384875453 0.000842093 CG9384 FBtr0333044|FBtr0075690 14765702|14765702 14767703|14767703 3L + 14766816 14766875 3'utr CG9384 FlyBase G30302.2 ATTAAATAACGAAACGATTTTTAGCATTGTTGCTTTTTTACTGTGATTTGTTAATAATTT 49 14766863 0.696481717 10 47 614 0.966101695 1.755874856 0.152542373 0.163265306 0.305084746 49 2 0 57 3L:14766816-14766875 8 CG9384 FBtr0333044|FBtr0075690 14765702|14765702 14767703|14767703 CTGTGATT 8mer-m1 dme-miR-308-3p 3L + 14766830 14766874 3'utr CG9384 FlyBase G22920.1 CGATTTTTAGCATTGTTGCTTTTTTACTGTGATTTGTTAATAATT 37 14766863 0.715685298 10 37 474 1 1.681241237 0.104166667 0.216216216 0.395833333 37 0 0 48 3L:14766830-14766874 8 39 1186 FBgn0036446 489.33 13.20333333 20.20333333 0.079700815 2.953799546 1.930374526 -7 -7 -7 0.25 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 14800347 14800352 + 3L_14800347_14800352_+ 0.999978545 0.999990927 0.999984736 8.77E-06 CG9425 FBtr0075693 14799234 14801089 3L + 14800322 14800387 3'utr CG9425 FlyBase G30348.1 ATTTAAATTTGTGCACGAGTTATTTGTTCCTTTGCCCATCCGAAATTGTCGATGCATGTGTAAATT 15 14800346 0.771435887 9 15 148 1 1.255272505 0.222222222 0.2 0.333333333 15 0 0 18 3L:14800322-14800387 6 CG9425 FBtr0075693 14799234 14801089 GTTCCT 6mer2-7 dme-miR-276a-3p 3L + 14800300 14800379 3'utr CG9425 FlyBase G22943.1 TATATATAATATGCATATAAATATTTAAATTTGTGCACGAGTTATTTGTTCCTTTGCCCATCCGAAATTGTCGATGCATG 11 14800346 0.989355944 7 11 108 1 1.176091259 0.266666667 0.272727273 0.466666667 11 0 0 15 3L:14800300-14800379 6 8 1187 FBgn0036451 1200.986667 17.94333333 27.59666667 0.00666119 0.44584804 0.289890083 1 1 1 0.25 dme-miR-1008-3p 6mer2-7 GCTGTG 3L 1491256 1491261 - 3L_1491256_1491261_- 0.958568704 0.997486019 0.978027361 0.027518687 CG12084 FBtr0332656 1490949 1491753 3L - 1491224 1491289 3'utr CG12084 FlyBase G33306.1 ACGATGCTCACTTAACCCCCCCACATTTGCTGTGCTTTCGCATCACGAACCCAAGTAGCTGCAAGT 21 1491263 0.98295709 5 21 157 1 1.361727836 0.086956522 0.095238095 0.173913043 21 0 0 23 3L:1491224-1491289 6 CG12084 FBtr0332656 1490949 1491753 GCTGTG 6mer2-7 dme-miR-1008-3p 3L - 1491214 1491289 3'utr CG12084 FlyBase G25197.1 ACGATGCTCACTTAACCCCCCCACATTTGCTGTGCTTTCGCATCACGAACCCAAGTAGCTGCAAGTTCAGGATCGG 7 1491263 0.968399461 5 7 34 1 1 0 0.285714286 0.5 7 0 0 10 3L:1491214-1491289 6 11 1188 FBgn0043458 1091.493333 38.07666667 58.14666667 0.010077936 0.288890834 0.189176794 2 2 2 0.25 dme-miR-33-5p 6mer2-7 AATGCA 3L 14991399 14991404 + 3L_14991399_14991404_+ 0.918862194 0.782082743 0.850472469 0.096717712 mnd FBtr0075626|FBtr0114529|FBtr0075627 14991215|14991215|14991215 14991667|14991667|14991667 3L + 14991256 14991581 3'utr mnd FlyBase G30373.2 TGTGGATGTATCGATCAACGCAACTATAGAAGGGAATATCTTGTAGTTAGGATAAGTCTCAATTTACCCCTAAGATAGGTTAGCAACGCGAAATTTTGAAAACCTACGCACAACATTACAAAAGTGTTATTGTAAATAACTCAAATGCATTCTGGTAGGGAAGTCCCTGCTTCAATTAATATTATTTGTTAGTCGTACTTTTAATGTATATTTCAAACCCAAAAAAAATGAGTTCCTCGTCGAAAGCAGAAGTACGCCTGTTATACAAAATGCGAACCAATTTTTACATATTATACAAGTAATTAGGAGCTTATTCAGTAAGTAAT 210 14991404 0.972122629 38 194 1265 0.933609959 1.507084478 0.232365145 0.123809524 0.236514523 210 10 6 225 3L:14991256-14991581 6 mnd FBtr0114529|FBtr0075627|FBtr0075626 14991215|14991215|14991215 14991667|14991667|14991667 AATGCA 6mer2-7 dme-miR-33-5p 3L + 14991250 14991428 3'utr mnd FlyBase G22958.1 GCCTTTTGTGGATGTATCGATCAACGCAACTATAGAAGGGAATATCTTGTAGTTAGGATAAGTCTCAATTTACCCCTAAGATAGGTTAGCAACGCGAAATTTTGAAAACCTACGCACAACATTACAAAAGTGTTATTGTAAATAACTCAAATGCATTCTGGTAGGGAAGTCCCTGCTTC 70 14991405 0.976540047 21 67 431 0.971428571 2.008600172 0.180952381 0.314285714 0.542857143 70 3 0 102 3L:14991250-14991428 6 41 1189 FBgn0002778 691.1866667 34.75 53.52333333 0.059318274 1.179856115 0.76602105 -5 -6 -5.5 0.25 dme-miR-276a-3p 7mer-m8 AGTTCCT 3L 14991486 14991492 + 3L_14991486_14991492_+ 0.442498597 0.630131381 0.536314989 0.132676425 mnd FBtr0075626|FBtr0114529|FBtr0075627 14991215|14991215|14991215 14991667|14991667|14991667 3L + 14991256 14991581 3'utr mnd FlyBase G30373.2 TGTGGATGTATCGATCAACGCAACTATAGAAGGGAATATCTTGTAGTTAGGATAAGTCTCAATTTACCCCTAAGATAGGTTAGCAACGCGAAATTTTGAAAACCTACGCACAACATTACAAAAGTGTTATTGTAAATAACTCAAATGCATTCTGGTAGGGAAGTCCCTGCTTCAATTAATATTATTTGTTAGTCGTACTTTTAATGTATATTTCAAACCCAAAAAAAATGAGTTCCTCGTCGAAAGCAGAAGTACGCCTGTTATACAAAATGCGAACCAATTTTTACATATTATACAAGTAATTAGGAGCTTATTCAGTAAGTAAT 210 14991485 0.972122629 38 194 1265 0.933609959 1.507084478 0.232365145 0.123809524 0.236514523 210 10 6 225 3L:14991256-14991581 7 mnd FBtr0114529|FBtr0075627|FBtr0075626 14991215|14991215|14991215 14991667|14991667|14991667 AGTTCCT 7mer-m8 dme-miR-276a-3p 3L + 14991470 14991564 3'utr mnd FlyBase G22959.1 AAACCCAAAAAAAATGAGTTCCTCGTCGAAAGCAGAAGTACGCCTGTTATACAAAATGCGAACCAATTTTTACATATTATACAAGTAATTAGGAG 30 14991485 0.969287592 13 29 163 0.954545455 1.62324929 0.159090909 0.3 0.522727273 30 2 0 42 3L:14991470-14991564 7 32 1190 FBgn0002778 691.1866667 34.75 53.52333333 0.046297189 0.920863309 0.597870088 1 1 1 0.25 dme-miR-1006-3p 7mer-m8 CGAATTT 3L 14991621 14991627 + 3L_14991621_14991627_+ 0.55278862 0.653574911 0.603181765 0.071266676 mnd FBtr0075626|FBtr0114529|FBtr0075627 14991215|14991215|14991215 14991667|14991667|14991667 3L + 14991593 14991645 3'utr mnd FlyBase G30374.1 ATGCAACTTTTTGCGAAATGTAAAAAATCGAATTTGTTTTGTATAAGAAAGTT 33 14991620 0.929422371 4 30 308 0.947368421 1.556302501 0.184210526 0.121212121 0.236842105 33 2 0 36 3L:14991593-14991645 7 mnd FBtr0114529|FBtr0075627|FBtr0075626 14991215|14991215|14991215 14991667|14991667|14991667 CGAATTT 7mer-m8 dme-miR-1006-3p 3L + 14991593 14991641 3'utr mnd FlyBase G22960.1 ATGCAACTTTTTGCGAAATGTAAAAAATCGAATTTGTTTTGTATAAGAA 12 14991620 0.986979778 3 11 96 1 1.230448921 0.294117647 0.25 0.470588235 12 0 0 17 3L:14991593-14991641 7 21 1191 FBgn0002778 691.1866667 34.75 53.52333333 0.030382531 0.604316547 0.392352245 1 1 1 0.25 dme-miR-263a-5p 6mer3-8 GTGCCA 3L 15001765 15001770 - 3L_15001765_15001770_- 0.938559889 0.90312518 0.920842534 0.025056117 Reck FBtr0333876|FBtr0075671 15001236|15001236 15001821|15001821 3L - 15001687 15001958 stop_codon Reck FlyBase G36876.1 CAACCAATCTAGCTCTATCCTGTTTGACAGTATCGCATCTACTAGAACCCACGCCAAATGGAGCTACATCTTATGGTCCCCACGCCATTTGGATACTCCCCTTACTTTTGTTAGTTTCTAGAGTAATCATAGCTTAAGATAGTCCTAGAAGGAGTGTGTATGATCTGACTCAATCAAGTGAATTCTTGGTGCCAATTAACCCGTTATTCTAAGGAGATGGAAAGTGCCTTCAACTGTAAGGAATTGACCCTCTGTACCATGTGATATTAGCT 499 15001773 0.998993863 52 457 3673 0.92092257 1.349471799 0.179571664 0.176352705 0.322899506 499 24 24 559 3L:15001687-15001958 6 Reck FBtr0333876|FBtr0075671 15001236|15001236 15001821|15001821 GTGCCA 6mer3-8 dme-miR-263a-5p 3L - 15001687 15001834 stop_codon Reck FlyBase G27837.1 AATCATAGCTTAAGATAGTCCTAGAAGGAGTGTGTATGATCTGACTCAATCAAGTGAATTCTTGGTGCCAATTAACCCGTTATTCTAAGGAGATGGAAAGTGCCTTCAACTGTAAGGAATTGACCCTCTGTACCATGTGATATTAGCT 350 15001773 0.781999025 34 310 2550 0.877862595 0.990659974 0.185114504 0.365714286 0.576335878 350 18 46 460 3L:15001687-15001834 6 193.5 1192 FBgn0036463 378 10.74666667 16.56333333 0.511904762 18.00558313 11.68243107 3 3 3 0.25 dme-miR-79-3p 8mer-A1 TAGCTTTA 3L 1503362 1503369 - 3L_1503362_1503369_- 0.459567446 0.469005984 0.464286715 0.006674098 cue FBtr0072706 1503224 1503826 3L - 1503313 1503407 3'utr cue FlyBase G33337.2 CGTCATGTTGAAATGAATGCAAGTCGCGCGACTGACATTAGCTTTAAAAACGGATTACGCGGCCGCAAGACCATTGCGATTGTGATGATTGCATC 780 1503370 0.786645013 13 768 4364 0.988184748 2.662757832 0.383458647 0.158974359 0.29538131 780 10 1 920 3L:1503313-1503407 8 cue FBtr0072706 1503224 1503826 TAGCTTTA 8mer-A1 dme-miR-79-3p 3L - 1503298 1503417 3'utr cue FlyBase G25215.1 ACTTTGAATACGTCATGTTGAAATGAATGCAAGTCGCGCGACTGACATTAGCTTTAAAAACGGATTACGCGGCCGCAAGACCATTGCGATTGTGATGATTGCATCCGGATCTGTTGTAAT 598 1503370 0.968722558 20 589 3253 0.988358556 2.92890769 0.339930151 0.339464883 0.54016298 598 10 0 849 3L:1503298-1503417 8 658.5 1193 FBgn0011204 1050.61 45.31 69.18333333 0.626778729 14.53321563 9.518188388 1 1 1 0.25 dme-miR-14-3p 6mer3-8 AAGACT 3L 15090878 15090883 - 3L_15090878_15090883_- 0.999397264 0.998356704 0.998876984 0.000735815 CG6945 FBtr0075657 15090821 15091353 3L - 15090868 15090924 5'utr CG6945 FlyBase G36900.1 AATATACCGATTGGATACTGATATATTCACCGAGTTTTCTTAAGACTAACTACCGAC 18 15090885 0.691128991 9 16 133 0.904761905 1.278753601 0.380952381 0.166666667 0.285714286 18 2 0 19 3L:15090868-15090924 6 CG6945 FBtr0075657 15090821 15091353 AAGACT 6mer3-8 dme-miR-14-3p 3L - 15090857 15090926 5'utr CG6945 FlyBase G27861.1 TGAATATACCGATTGGATACTGATATATTCACCGAGTTTTCTTAAGACTAACTACCGACAAGCAATAACA 7 15090885 0.979085478 6 7 53 1 1 0.3 0.142857143 0.4 7 0 0 10 3L:15090857-15090926 6 7 1194 FBgn0036476 404.2866667 17.14 26.23666667 0.017314447 0.4084014 0.266802185 2 2 2 0.25 dme-bantam-3p 8mer-A1 TGATCTCA 3L 15127543 15127550 + 3L_15127543_15127550_+ 0.618277409 0.416516641 0.517397025 0.14266643 Cep135 FBtr0333853 15127334 15128029 3L + 15127488 15127572 3'utr Cep135 FlyBase G30414.1 TGCGCGATGAGCTTCAGCAGAGCTTGGCCATTAATCAGGTCACCAACGAAACCACTGATCTCATGCTCGGGCGCTTGCACAATGA 109 15127551 0.95625757 7 107 502 0.983870968 1.785329835 0.274193548 0.128440367 0.233870968 109 1 1 122 3L:15127488-15127572 8 Cep135 FBtr0333853 15127334 15128029 TGATCTCA 8mer-A1 dme-bantam-3p 3L + 15127524 15127570 3'utr Cep135 FlyBase G22997.1 AGGTCACCAACGAAACCACTGATCTCATGCTCGGGCGCTTGCACAAT 68 15127551 0.703646431 4 67 324 0.990825688 1.73239376 0.211009174 0.411764706 0.633027523 68 0 1 108 3L:15127524-15127570 8 88 1195 FBgn0036480 383.3666667 13.55333333 20.77666667 0.229545257 6.492867683 4.235520616 -8 -8 -8 0.25 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 15154579 15154586 - 3L_15154579_15154586_- 0.637118126 0.636581772 0.636849949 0.000379221 Msh6 FBtr0075646 15154231 15154664 3L - 15154444 15154614 3'utr Msh6 FlyBase G36934.1 AAACATGTTTACTTATGATTCGCCAAGAGGCAGCTATGCTGGAATTTGATGTATACGAAGCTTTTTAAGACTTTTTCACCATTTCAGTATGCATTTTTTTTGTAGTTTTTATAAGGAATTTGAATCAAAACCTGTGCCATTCTCAACATTCTCAATTAAGCAAAATGGAAC 117 15154578 0.980341138 26 103 853 0.881118881 2.100370545 0.083916084 0.205128205 0.34965035 117 17 0 126 3L:15154444-15154614 8 Msh6 FBtr0075646 15154231 15154664 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L - 15154467 15154610 3'utr Msh6 FlyBase G27890.1 ATGTTTACTTATGATTCGCCAAGAGGCAGCTATGCTGGAATTTGATGTATACGAAGCTTTTTAAGACTTTTTCACCATTTCAGTATGCATTTTTTTTGTAGTTTTTATAAGGAATTTGAATCAAAACCTGTGCCATTCTCAACA 90 15154596 0.887134801 20 86 592 0.944444444 2.075546961 0.126984127 0.3 0.5 90 7 0 119 3L:15154467-15154610 8 52.5 1196 FBgn0036486 1407.773333 41.68666667 63.93666667 0.037292935 1.25939549 0.821125072 -8 10 1 0.25 dme-miR-282-5p 7mer-A1 GAGGCTA 3L 15154638 15154644 - 3L_15154638_15154644_- 0.499145925 0.481099096 0.49012251 0.012761015 Msh6 FBtr0075646 15154231 15154664 3L - 15154629 15154666 stop_codon Msh6 FlyBase G36935.1 AGGGTGCAGAAGCTCCAAAGTTGAGGCTACCAGACACC 46 15154645 0.722163575 2 44 143 0.945454545 1.414973348 0.109090909 0.173913043 0.309090909 46 2 1 52 3L:15154629-15154666 7 Msh6 FBtr0075646 15154231 15154664 GAGGCTA 7mer-A1 dme-miR-282-5p 3L - 15154621 15154657 3'utr Msh6 FlyBase G27891.1 AAGCTCCAAAGTTGAGGCTACCAGACACCATTTCCCA 20 15154646 0.906806879 2 20 63 1 1.568201724 0 0.55 0.756756757 20 0 0 37 3L:15154621-15154657 7 33 1197 FBgn0036486 1407.773333 41.68666667 63.93666667 0.023441274 0.791620022 0.516135759 1 2 1.5 0.25 dme-miR-968-5p 6mer3-8 ACTACT 3L 1523208 1523213 + 3L_1523208_1523213_+ 0.753317377 0.691811967 0.722564672 0.043490885 Psa FBtr0072700|FBtr0072697|FBtr0072701|FBtr0306557|FBtr0072702|FBtr0072699|FBtr0072698|FBtr0333395 1522918|1522918|1522918|1522918|1522918|1522918|1522918|1522918 1523380|1523380|1523380|1523380|1523380|1523380|1523380|1523380 3L + 1523114 1523222 3'utr Psa FlyBase G27116.1 GTACTCCTAAAGATGAGAGCCAAATAGGTTAGCTTTAGTCAAGGATCCACCTACAGCCACTGCTCCAACCGGGCGTGCTTACATATATCGATTGACTACTCGCCCCAGC 40 1523205 0.948908266 10 40 215 1 1.69019608 0.285714286 0.15 0.306122449 40 0 0 49 3L:1523114-1523222 6 Psa FBtr0072698|FBtr0333395|FBtr0072702|FBtr0072699|FBtr0072701|FBtr0306557|FBtr0072700|FBtr0072697 1522918|1522918|1522918|1522918|1522918|1522918|1522918|1522918 1523380|1523380|1523380|1523380|1523380|1523380|1523380|1523380 ACTACT 6mer3-8 dme-miR-968-5p 3L + 1523173 1523223 3'utr Psa FlyBase G20525.1 CTGCTCCAACCGGGCGTGCTTACATATATCGATTGACTACTCGCCCCAGCA 13 1523205 0.968175557 5 13 76 1 1.397940009 0.16 0.461538462 0.72 13 0 0 25 3L:1523173-1523223 6 17 1198 FBgn0261243 1862.84 60.46333333 92.53333333 0.009125851 0.281162137 0.183717579 3 3 3 0.25 dme-miR-14-3p 6mer2-7 AGACTG 3L 15242280 15242285 + 3L_15242280_15242285_+ 0.943060303 0.987816459 0.965438381 0.031647413 Tollo FBtr0075607 15240160 15242832 3L + 15242260 15242297 3'utr Tollo FlyBase G30437.1 TAGAAGGATTCACTTGGTTTAGACTGTAAAGAGTTAAA 15 15242278 0.683931682 5 14 114 0.944444444 1.230448921 0.166666667 0.2 0.333333333 15 1 0 17 3L:15242260-15242297 6 Tollo FBtr0075607 15240160 15242832 AGACTG 6mer2-7 dme-miR-14-3p 3L + 15242261 15242298 3'utr Tollo FlyBase G23014.1 AGAAGGATTCACTTGGTTTAGACTGTAAAGAGTTAAAT 13 15242278 0.656065455 5 12 93 0.916666667 1.342422681 0.291666667 0.615384615 0.791666667 13 2 0 22 3L:15242261-15242298 6 14 1199 FBgn0029114 1018.113333 17.04 26.18666667 0.013750925 0.821596244 0.534623218 2 2 2 0.25 dme-miR-283-5p 8mer-m1 TGATATTT 3L 15242345 15242352 + 3L_15242345_15242352_+ 0.500291725 0.471836756 0.48606424 0.020120653 Tollo FBtr0075607 15240160 15242832 3L + 15242323 15242370 3'utr Tollo FlyBase G30438.1 ACGTTTATTTGTTTAATCATTGTGATATTTTGTTTTATCAATAAGTCC 63 15242342 0.69995681 13 57 841 0.923076923 1.158362492 0.243589744 0.174603175 0.333333333 63 2 4 72 3L:15242323-15242370 8 Tollo FBtr0075607 15240160 15242832 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 15242323 15242362 3'utr Tollo FlyBase G23015.1 ACGTTTATTTGTTTAATCATTGTGATATTTTGTTTTATCA 39 15242341 0.708563098 8 37 484 0.921875 1.770852012 0.140625 0.41025641 0.640625 39 5 0 59 3L:15242323-15242362 8 51 1200 FBgn0029114 1018.113333 17.04 26.18666667 0.050092655 2.992957746 1.947556008 3 4 3.5 0.25 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 1535130 1535136 - 3L_1535130_1535136_- 0.733745449 0.823337006 0.778541228 0.063350828 CG12091 FBtr0333400|FBtr0072831 1534927|1535010 1535595|1535595 3L - 1535077 1535180 3'utr CG12091 FlyBase G33360.1 TGGAAGCTGGATGGATGGTGGACCCGGAATGGAGCGAGTCGAGTGCAGCTATCTGACTGAGGACGGAGGATTACCCATTTACGCGGGCGAACGAACTGTCTTTA 30 1535129 0.777278922 13 24 135 0.846153846 0.916453949 0.307692308 0.266666667 0.435897436 30 3 3 33 3L:1535077-1535180 7 CG12091 FBtr0072831|FBtr0333400 1535010|1534927 1535595|1535595 GCAGCTA 7mer-A1 dme-miR-980-3p 3L - 1535035 1535182 3'utr CG12091 FlyBase G25231.1 GATGGAAGCTGGATGGATGGTGGACCCGGAATGGAGCGAGTCGAGTGCAGCTATCTGACTGAGGACGGAGGATTACCCATTTACGCGGGCGAACGAACTGTCTTTAAACAATTTTTGTCGAAATGTACTCACTGATATTTGCGACCCA 36 1535137 0.92588976 13 31 162 0.854166667 1.612783857 0.416666667 0.222222222 0.416666667 36 7 0 41 3L:1535035-1535182 7 20 1201 FBgn0035228 678.3333333 45.40666667 69.66333333 0.029484029 0.440463955 0.287095076 -7 1 -3 0.25 dme-miR-13b-2-5p 7mer-A1 TTGACGA 3L 1535458 1535464 - 3L_1535458_1535464_- 0.575267727 0.606045771 0.590656749 0.021763403 CG12091 FBtr0333400|FBtr0072831 1534927|1535010 1535595|1535595 3L - 1535415 1535624 stop_codon CG12091 FlyBase G33363.1 CCGTTGTCCTGGCCACCGTGGCGATGTGAGAGTGGTGCTCCAGCCCATCCTCCCTAGTGATTAACGTTTACTTGTAGTCCGTACGTGTTTAGTTAGCTTTAGGAGCCAGTTTCGTGGTTCTGTCTACCGTTTAAGCTGCATGTTGAGATTGAGATTGTGATTGACGAGGACGACGACCCTTTGACCCTTTGCATTGTTAGTTACATATAT 459 1535470 0.817845686 34 445 3211 0.969811321 1.932811869 0.581132075 0.139433551 0.254716981 459 11 5 514 3L:1535415-1535624 7 CG12091 FBtr0072831|FBtr0333400 1535010|1534927 1535595|1535595 TTGACGA 7mer-A1 dme-miR-13b-2-5p 3L - 1535423 1535583 3'utr CG12091 FlyBase G25234.1 AGCCCATCCTCCCTAGTGATTAACGTTTACTTGTAGTCCGTACGTGTTTAGTTAGCTTTAGGAGCCAGTTTCGTGGTTCTGTCTACCGTTTAAGCTGCATGTTGAGATTGAGATTGTGATTGACGAGGACGACGACCCTTTGACCCTTTGCATTGTTAGTT 352 1535470 0.805250796 24 351 2442 0.998123827 2.424881637 0.544090056 0.352272727 0.572232645 352 0 1 532 3L:1535423-1535583 7 209 1202 FBgn0035228 678.3333333 45.40666667 69.66333333 0.308108108 4.602848334 3.000143548 6 6 6 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 3L 1544622 1544629 + 3L_1544622_1544629_+ 0.642445454 0.643315664 0.642880559 0.000615324 CG7852 FBtr0072736|FBtr0072737|FBtr0072735 1544074|1541507|1544074 1544823|1544823|1544823 3L + 1544600 1544641 3'utr CG7852 FlyBase G27133.1 AGCTTTTAGTTTAGTTGATTTTACCAAAGAATCTTTGTTTTT 20 1544621 0.838294311 4 19 209 0.954545455 1.021189299 0 0.1 0.181818182 20 0 1 21 3L:1544600-1544641 8 CG7852 FBtr0072737|FBtr0072735|FBtr0072736 1541507|1544074|1544074 1544823|1544823|1544823 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 1544612 1544634 3'utr CG7852 FlyBase G20537.1 AGTTGATTTTACCAAAGAATCTT 5 1544621 0.724904695 3 5 28 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3L:1544612-1544634 8 12 1203 FBgn0035229 480 10.39 15.81 0.025 1.154956689 0.759013283 1 1 1 0.25 dme-miR-307a-3p 6mer3-8 GGTTGT 3L 15503460 15503465 + 3L_15503460_15503465_+ 0.752510406 0.95264458 0.852577493 0.14151625 CG7272 FBtr0075548 15503417 15503769 3L + 15503413 15503479 stop_codon CG7272 FlyBase G30466.1 AAATAATTGAAATCGAACGCTTTACCTAGAAAAAAGGACAAATAATGGGTTGTTGCAACAACATTAC 34 15503435 0.942142138 13 28 157 0.860465116 1.091080469 0.162790698 0.264705882 0.418604651 34 4 2 37 3L:15503413-15503479 6 CG7272 FBtr0075548 15503417 15503769 GGTTGT 6mer3-8 dme-miR-307a-3p 3L + 15503417 15503473 stop_codon CG7272 FlyBase G23035.1 AATTGAAATCGAACGCTTTACCTAGAAAAAAGGACAAATAATGGGTTGTTGCAACAA 20 15503463 0.723834527 8 17 93 0.884615385 1.361727836 0.115384615 0.2 0.384615385 20 3 0 23 3L:15503417-15503473 6 10 1204 FBgn0036501 774.8233333 80.60666667 124.19 0.012906168 0.124059218 0.080521781 25 -3 11 0.25 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 15510691 15510696 + 3L_15510691_15510696_+ 0.733465963 0.999786652 0.866626307 0.188317173 gdl-ORF39 FBtr0091756 15509667 15510837 3L + 15510671 15510706 3'utr gdl-ORF39 FlyBase G30469.1 AAGGAGATAAAAATACAAATGTTCCTGTTGGACTTC 9 15510690 0.971506622 3 9 62 1 1.204119983 0.5625 0.444444444 0.6875 9 0 0 16 3L:15510671-15510706 6 gdl-ORF39 FBtr0091756 15509667 15510837 GTTCCT 6mer2-7 dme-miR-276a-3p 3L + 15510672 15510705 3'utr gdl-ORF39 FlyBase G23037.1 AGGAGATAAAAATACAAATGTTCCTGTTGGACTT 6 15510690 0.963257686 3 6 40 1 1.041392685 0.818181818 0.666666667 0.818181818 6 0 0 11 3L:15510672-15510705 6 7.5 1205 FBgn0028377 16.80333333 2.22 3.413333333 0.446340012 3.378378378 2.197265625 1 1 1 0.25 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 15552118 15552123 + 3L_15552118_15552123_+ 0.945917179 0.974864898 0.960391039 0.020469115 CrebA FBtr0075558 15551273 15553214 3L + 15552057 15552134 3'utr CrebA FlyBase G30493.2 TGAATGAATTAACGAAAGACTCCCGGAGCTCAATCTCTGTGCTGTCTTTGGCATGACTATTGTTCCTTTAAACGATAT 37 15552116 0.770716109 14 32 288 0.895833333 1.156347201 0.1875 0.27027027 0.4375 37 3 2 43 3L:15552057-15552134 6 CrebA FBtr0075558 15551273 15553214 GTTCCT 6mer2-7 dme-miR-276a-3p 3L + 15552072 15552141 3'utr CrebA FlyBase G23064.1 AAGACTCCCGGAGCTCAATCTCTGTGCTGTCTTTGGCATGACTATTGTTCCTTTAAACGATATTTCTCAA 28 15552117 0.713180509 8 27 242 0.956521739 1.643452676 0.304347826 0.428571429 0.652173913 28 2 0 44 3L:15552072-15552141 6 20 1206 FBgn0004396 2312.63 76.99666667 118.8566667 0.008648162 0.259751504 0.168269905 2 1 1.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3L 15552667 15552672 + 3L_15552667_15552672_+ 0.927047096 0.987709144 0.95737812 0.042894512 CrebA FBtr0075558 15551273 15553214 3L + 15552642 15552765 3'utr CrebA FlyBase G30495.1 TTTCGCAGCGTTCTAAATGAGTCATTCTAGTTTTTATTAGTTGAATTTATAAACACAAAATTACTTAACGGAAATTTCAAGCGTAACCCGTTGATTTCCTATCAACTCGATAATATGTATCTAT 99 15552666 0.909863664 15 96 907 0.965517241 2.049218023 0.120689655 0.151515152 0.275862069 99 4 0 112 3L:15552642-15552765 6 CrebA FBtr0075558 15551273 15553214 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 15552637 15552870 3'utr CrebA FlyBase G23067.1 ATTCTTTTCGCAGCGTTCTAAATGAGTCATTCTAGTTTTTATTAGTTGAATTTATAAACACAAAATTACTTAACGGAAATTTCAAGCGTAACCCGTTGATTTCCTATCAACTCGATAATATGTATCTATAAAATATAATTTAGCTATTTCTACGTATGTCTGTGCATGTGTGTATAAATCAAGCGGGCGAAGTTGTGCAATTGTTAGAAAATTTTTAAAAGAAAGATATTTAGT 60 15552666 0.988255138 17 52 472 0.873563218 1.579783597 0.310344828 0.333333333 0.540229885 60 10 1 76 3L:15552637-15552870 6 43 1207 FBgn0004396 2312.63 76.99666667 118.8566667 0.018593549 0.558465734 0.361780296 1 1 1 0.25 dme-miR-92b-3p 7mer-m8 GTGCAAT 3L 15552915 15552921 + 3L_15552915_15552921_+ 0.656530555 0.585874624 0.621202589 0.049961337 CrebA FBtr0075558 15551273 15553214 3L + 15552884 15552929 3'utr CrebA FlyBase G30497.1 TCAGAAATCGATGTTGAAAAACAAAACGCTCGTGCAATGACAAACA 9 15552920 0.994317008 3 9 30 1 0.954242509 0.222222222 0 0 9 0 0 9 3L:15552884-15552929 7 CrebA FBtr0075558 15551273 15553214 GTGCAAT 7mer-m8 dme-miR-92b-3p 3L + 15552886 15553030 3'utr CrebA FlyBase G23068.1 AGAAATCGATGTTGAAAAACAAAACGCTCGTGCAATGACAAACAAAATTTTATTAATAAAGCGTTAAACAAACAAATTAAAGACAACATGAAATATACATTATGATATATTTATATATACAAGTATGAATAATGTACGACTATTT 16 15552920 0.984123635 11 15 76 0.961538462 1.397940009 0.230769231 0.4375 0.653846154 16 1 0 25 3L:15552886-15553030 7 6 1208 FBgn0004396 2312.63 76.99666667 118.8566667 0.002594449 0.077925451 0.050480971 -5 -5 -5 0.25 dme-miR-970-3p 7mer-A1 CTTATGA 3L 1555544 1555550 - 3L_1555544_1555550_- 0.823176961 0.823273427 0.823225194 6.82E-05 CG12099 FBtr0072829|FBtr0072828 1555361|1555361 1555568|1555568 3L - 1555526 1555569 stop_codon CG12099 FlyBase G33371.1 AAGAGCTAGATGATGATCGCTTATGAAGTTACAAGATTTATTGT 10 1555556 0.972331617 6 10 61 1 1.176091259 0.466666667 0.4 0.6 10 0 0 15 3L:1555526-1555569 7 CG12099 FBtr0072828|FBtr0072829 1555361|1555361 1555568|1555568 CTTATGA 7mer-A1 dme-miR-970-3p 3L - 1555529 1555568 3'utr CG12099 FlyBase G25241.1 AGAGCTAGATGATGATCGCTTATGAAGTTACAAGATTTAT 6 1555548 0.950875887 4 6 39 1 1.079181246 0.166666667 0.5 0.75 6 0 0 12 3L:1555529-1555568 7 8 1209 FBgn0035232 2030.816667 84.03 129.1233333 0.003939302 0.095204094 0.061956269 6 -2 2 0.25 dme-miR-184-5p 6mer3-8 TGATAA 3L 15560771 15560776 - 3L_15560771_15560776_- 0.360756434 0.555336798 0.458046616 0.13758912 CG7739 FBtr0075596 15560724 15561085 3L - 15560749 15560803 3'utr CG7739 FlyBase G36968.1 TATATTTGTAATATGGTTTAAGAAATGTGATAATATAAAAAAGATAAAAAATAAT 34 15560787 0.709222123 7 32 252 0.951219512 1.591064607 0.170731707 0.117647059 0.268292683 34 2 0 39 3L:15560749-15560803 6 CG7739 FBtr0075596 15560724 15561085 TGATAA 6mer3-8 dme-miR-184-5p 3L - 15560757 15560809 3'utr CG7739 FlyBase G27913.1 ATAATTTATATTTGTAATATGGTTTAAGAAATGTGATAATATAAAAAAGATAA 31 15560787 0.983927689 8 28 220 0.93877551 1.662757832 0.224489796 0.451612903 0.653061224 31 3 0 46 3L:15560757-15560809 6 30.5 1210 FBgn0036509 636.82 33.70333333 51.37 0.047894224 0.904955 0.59373175 11 11 11 0.25 dme-miR-2a-2-5p 7mer-m8 TGATGAG 3L 15560836 15560842 + 3L_15560836_15560842_+ 0.592291185 0.64344814 0.617869662 0.036173391 AGO2 FBtr0075560|FBtr0331933|FBtr0075559 15560730|15560730|15560730 15561042|15561042|15561042 3L + 15560797 15560877 3'utr AGO2 FlyBase G30521.1 AAATATAAATTATGTAAAGGAGCATCTCTATTGATTCCATGATGAGCTATGATTTTAAAAGCCGCCTTGAGATGGTCCGCC 22 15560807 0.786331365 12 20 141 0.961538462 1.397940009 0.192307692 0.136363636 0.269230769 22 1 0 25 3L:15560797-15560877 7 AGO2 FBtr0075560|FBtr0331933|FBtr0075559 15560730|15560730|15560730 15561042|15561042|15561042 TGATGAG 7mer-m8 dme-miR-2a-2-5p 3L + 15560798 15560844 3'utr AGO2 FlyBase G23088.1 AATATAAATTATGTAAAGGAGCATCTCTATTGATTCCATGATGAGCT 13 15560807 0.877901483 6 10 92 0.764705882 1.113943352 0.176470588 0.307692308 0.470588235 13 4 0 13 3L:15560798-15560844 7 8.5 1211 FBgn0087035 9002.526667 265.6766667 406.73 0.000944179 0.031993777 0.020898385 29 29 29 0.25 dme-miR-14-3p 6mer3-8 AAGACT 3L 15603042 15603047 + 3L_15603042_15603047_+ 0.987275751 0.902461242 0.944868496 0.059972979 RhoGAP71E FBtr0075568|FBtr0075567 15602556|15602699 15603119|15603119 3L + 15603027 15603054 3'utr RhoGAP71E FlyBase G30598.1 AATCAACAACACATTAAGACTTAAGAAT 7 15603041 0.960273592 2 5 24 0.625 0.698970004 0.5 0.142857143 0.25 7 3 0 5 3L:15603027-15603054 6 RhoGAP71E FBtr0075568|FBtr0075567 15602556|15602699 15603119|15603119 AAGACT 6mer3-8 dme-miR-14-3p 3L + 15603022 15603061 3'utr RhoGAP71E FlyBase G23138.1 ACAACAATCAACAACACATTAAGACTTAAGAATTTGAAGA 9 15603041 0.707234511 3 8 32 1 1.041392685 0.090909091 0.25 0.454545455 8 0 0 11 3L:15603022-15603061 6 6.5 1212 FBgn0036518 3855.043333 129.2366667 200.3833333 0.001686103 0.050295324 0.032437827 1 1 1 0.25 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3L 15608457 15608462 + 3L_15608457_15608462_+ 0.860223089 0.833297777 0.846760433 0.019039062 RhoGAP71E FBtr0290065|FBtr0332093|FBtr0075569|FBtr0332092|FBtr0303510 15606679|15607124|15607124|15604842|15606675 15609125|15609125|15609125|15609125|15609125 3L + 15608414 15608474 3'utr RhoGAP71E FlyBase G30613.1 TCTTTGCGAAGTTAGAGAAAGAAACAATTTCCTCCTCGCTGTGTTTGACCGACCACATTTG 10 15608458 0.981315789 7 10 70 1 1.204119983 0.125 0.3 0.5625 10 0 0 16 3L:15608414-15608474 6 RhoGAP71E FBtr0332093|FBtr0290065|FBtr0303510|FBtr0332092|FBtr0075569 15607124|15606679|15606675|15604842|15607124 15609125|15609125|15609125|15609125|15609125 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3L + 15608439 15608466 3'utr RhoGAP71E FlyBase G23150.1 AATTTCCTCCTCGCTGTGTTTGACCGAC 5 15608458 0.799343531 3 5 45 1 1 0.3 0.8 0.9 5 0 0 10 3L:15608439-15608466 6 6.5 1213 FBgn0036518 3855.043333 129.2366667 200.3833333 0.001686103 0.050295324 0.032437827 -1 -1 -1 0.25 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 15609176 15609182 - 3L_15609176_15609182_- 0.659974287 0.660790385 0.660382336 0.00057707 CG7650 FBtr0075591 15608705 15609453 3L - 15609136 15609261 3'utr CG7650 FlyBase G36989.1 ACACGACTTCTTGGAATCTCCGAGTTACTTGTCAGTTTAAGCCAGGGCTTTAGAATTATACGCAAATTTTGACCAAATATGTGTTCGTAAGATTAGCATTTAAGAGAACTTAAGCCCGCCCTCCGT 81 15609182 0.876618309 18 75 704 0.930693069 1.672097858 0.138613861 0.209876543 0.366336634 81 6 1 94 3L:15609136-15609261 7 CG7650 FBtr0075591 15608705 15609453 TGTGTTC 7mer-m8 dme-miR-317-3p 3L - 15609137 15609288 3'utr CG7650 FlyBase G27928.1 TATAATTTGTATCAACAAAAGAAACTAACACGACTTCTTGGAATCTCCGAGTTACTTGTCAGTTTAAGCCAGGGCTTTAGAATTATACGCAAATTTTGACCAAATATGTGTTCGTAAGATTAGCATTTAAGAGAACTTAAGCCCGCCCTCCG 59 15609182 0.987765252 21 53 469 0.926315789 1.944482672 0.105263158 0.474576271 0.673684211 59 7 0 88 3L:15609137-15609288 7 42 1214 FBgn0036519 328.6966667 23.90333333 36.63666667 0.127777383 1.757077116 1.146392503 0 0 0 0.25 dme-miR-980-3p 7mer-m8 GGCAGCT 3L 15624067 15624073 + 3L_15624067_15624073_+ 0.56849976 0.567524516 0.568012138 0.000689641 CG7372 FBtr0075570 15623010 15624130 3L + 15624025 15624104 3'utr CG7372 FlyBase G30630.1 TTTCCTACATACACTGAACGCATTTTTGTAAATTGAATTTGTGGCAGCTTCTCTCATTCTGTAGCATCTAAGAGAGTCCG 89 15624066 0.988220883 13 81 741 0.935185185 1.305351369 0.046296296 0.179775281 0.324074074 89 3 4 101 3L:15624025-15624104 7 CG7372 FBtr0075570 15623010 15624130 GGCAGCT 7mer-m8 dme-miR-980-3p 3L + 15624026 15624107 3'utr CG7372 FlyBase G23165.1 TTCCTACATACACTGAACGCATTTTTGTAAATTGAATTTGTGGCAGCTTCTCTCATTCTGTAGCATCTAAGAGAGTCCGATG 63 15624066 0.986406259 14 61 518 0.954545455 1.322219295 0.056818182 0.253968254 0.465909091 63 1 3 84 3L:15624026-15624107 7 70 1215 FBgn0036522 715.7133333 20.76333333 31.90666667 0.097804521 3.371327661 2.193898872 1 1 1 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 3L 1574324 1574329 + 3L_1574324_1574329_+ 0.989898595 0.9999828 0.994940698 0.007130606 CG12004 FBtr0072746|FBtr0072745 1574027|1574027 1574732|1574732 3L + 1574311 1574418 3'utr CG12004 FlyBase G27161.1 TTGCCTCTGCGTCTGTGTTTCTGTATTTCCTACGTTTACACTCTACACCTAAACTTAAGCGTTTTTTAAAACAACTTATTTAGACGTTAGCTATGTACGAAACGAACT 24 1574324 0.963673178 12 23 184 0.962962963 1.414973348 0.259259259 0.125 0.222222222 24 1 0 26 3L:1574311-1574418 6 CG12004 FBtr0072745|FBtr0072746 1574027|1574027 1574732|1574732 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 1574308 1574362 3'utr CG12004 FlyBase G20560.1 GAGTTGCCTCTGCGTCTGTGTTTCTGTATTTCCTACGTTTACACTCTACACCTAA 13 1574328 0.991571634 9 12 132 1 1.322219295 0.095238095 0.538461538 0.714285714 13 0 0 21 3L:1574308-1574362 6 9.5 1216 FBgn0035236 1184.423333 63.35333333 97.16 0.008020781 0.149952647 0.097776863 0 -4 -2 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 1574627 1574633 + 3L_1574627_1574633_+ 0.756773518 0.744427545 0.750600532 0.00872994 CG12004 FBtr0072746|FBtr0072746|FBtr0072746|FBtr0072745|FBtr0072745|FBtr0072745 1574027|1574027|1574027|1574027|1574027|1574027 1574732|1574732|1574732|1574732|1574732|1574732 3L + 1574614 1574645 3'utr CG12004 FlyBase G27163.1 TTGACCACCCTTTTGTGATAAGCTCTCGTCGT 94 1574625 0.710938974 4 87 718 0.941176471 1.204119983 0.235294118 0.234042553 0.394957983 94 1 6 112 3L:1574614-1574645 7 CG12004 FBtr0072745|FBtr0072745|FBtr0072745|FBtr0072746|FBtr0072746|FBtr0072746 1574027|1574027|1574027|1574027|1574027|1574027 1574732|1574732|1574732|1574732|1574732|1574732 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 1574602 1574645 3'utr CG12004 FlyBase G20562.1 TGATTTCCCCTTTTGACCACCCTTTTGTGATAAGCTCTCGTCGT 51 1574625 0.738337802 7 49 382 0.972222222 1.544068044 0.25 0.333333333 0.527777778 51 1 1 70 3L:1574602-1574645 7 72 1217 FBgn0035236 1184.423333 63.35333333 97.16 0.060789076 1.136483216 0.741045698 2 2 2 0.25 dme-bantam-3p 7mer-m8 TGATCTC 3L 15810495 15810501 - 3L_15810495_15810501_- 0.520557552 0.435341675 0.477949614 0.060256741 fwe FBtr0075542|FBtr0075541|FBtr0075543 15810079|15810079|15810079 15810703|15812758|15812207 3L - 15810450 15810515 3'utr fwe FlyBase G36998.1 AATCCGATTAGCTCTGATCTCTTTCTAGAGCAATCCAAATTACTCGATCAGAAAGAAGCCACCCAA 94 15810494 0.986133988 7 88 742 0.941176471 1.447158031 0.075630252 0.212765957 0.378151261 94 4 3 112 3L:15810450-15810515 7 fwe FBtr0075541|FBtr0075543|FBtr0075542 15810079|15810079|15810079 15812758|15812207|15810703 TGATCTC 7mer-m8 dme-bantam-3p 3L - 15810480 15810518 3'utr fwe FlyBase G27938.1 TTAAATCCGATTAGCTCTGATCTCTTTCTAGAGCAATCC 47 15810494 0.707231811 4 47 361 1 1.826074803 0.029850746 0.361702128 0.552238806 47 0 0 67 3L:15810480-15810518 7 70 1218 FBgn0261722 816.3866667 52.16 79.50666667 0.085743684 1.34202454 0.880429314 -7 -7 -7 0.25 dme-miR-317-3p 8mer-A1 TGTGTTCA 3L 15819805 15819812 - 3L_15819805_15819812_- 0.629953586 0.63054951 0.630251548 0.000421365 DCP2 FBtr0304975 15818732 15821444 3L - 15819766 15820013 3'utr DCP2 FlyBase G37008.1 TTCCTATAATTCGTAAGCATGTCACGTTAGCATGTTAACTAATTCCTCCTTCAAACGTAGTCTCCAATGTGTGAAACAGTTGCCTATTAGCGTTTATCTTTAGACTAAGCAATGACCAGCAATGTCTCCAAGGTGGTAACATCAGAGCCAATAGGTTTACATCACCGAAAATCAAAAGAAGTTCCCTGTAACTCGGCCTTTTGTGTTCAATTCGAAAGTAGTTCTCTAAGCGTATCGGCCGAAAACAG 66 15819813 0.980954254 24 63 582 0.960526316 1.86332286 0.105263158 0.136363636 0.25 66 3 0 73 3L:15819766-15820013 8 DCP2 FBtr0304975 15818732 15821444 TGTGTTCA 8mer-A1 dme-miR-317-3p 3L - 15819755 15819834 3'utr DCP2 FlyBase G27947.1 AGTTCCCTGTAACTCGGCCTTTTGTGTTCAATTCGAAAGTAGTTCTCTAAGCGTATCGGCCGAAAACAGTAAGAAATTTG 24 15819813 0.987805672 9 24 214 1 1.544068044 0.228571429 0.333333333 0.542857143 24 0 0 35 3L:15819755-15819834 8 22 1219 FBgn0036534 5151.046667 115.94 176.9933333 0.004270977 0.189753321 0.124298467 1 1 1 0.25 dme-miR-980-3p 6mer3-8 GGCAGC 3L 15820319 15820324 - 3L_15820319_15820324_- 0.94169784 0.96928825 0.955493045 0.019509359 DCP2 FBtr0304975 15818732 15821444 3L - 15820283 15820383 3'utr DCP2 FlyBase G37010.1 ACACCGTTCGAAATGAAGAGCCACTTTCCCACAATCAGGGGCAATATCAGGCATATCTCGGCAGCAAAGTGTTTCGTCAATTTTTGATTGACCACTTGGGA 20 15820327 0.942434576 8 16 71 0.791666667 0.801632346 0.083333333 0.2 0.333333333 20 3 2 19 3L:15820283-15820383 6 DCP2 FBtr0304975 15818732 15821444 GGCAGC 6mer3-8 dme-miR-980-3p 3L - 15820265 15820347 3'utr DCP2 FlyBase G27950.1 AGGGGCAATATCAGGCATATCTCGGCAGCAAAGTGTTTCGTCAATTTTTGATTGACCACTTGGGAATGGGATTGTGAAGCTAA 15 15820328 0.973641092 9 12 78 0.857142857 0.77815125 0.238095238 0.266666667 0.476190476 15 1 2 18 3L:15820265-15820347 6 12 1220 FBgn0036534 5151.046667 115.94 176.9933333 0.002329624 0.103501811 0.067799164 3 4 3.5 0.25 dme-bantam-3p 6mer3-8 TGATCT 3L 15820468 15820473 - 3L_15820468_15820473_- 0.952462462 0.947965946 0.950214204 0.003179576 DCP2 FBtr0304975 15818732 15821444 3L - 15820417 15820518 3'utr DCP2 FlyBase G37011.1 AATGTAAATAATTAAATTGTGATATAGTATTTCTTAGCACAATTGTGATCTTAGCAAACGGCTGGCAACTACAAAAACTTTTATAAGCGCAACCACAACACC 663 15820469 0.981746994 17 638 4683 0.958083832 1.823908741 0.032335329 0.214177979 0.376047904 663 24 11 800 3L:15820417-15820518 6 DCP2 FBtr0304975 15818732 15821444 TGATCT 6mer3-8 dme-bantam-3p 3L - 15820439 15820619 3'utr DCP2 FlyBase G27951.1 AAATAATATTTCCGGGCCGTATTACTTACTGCCCGCCCCCACCTATGAAAGTTAGACGAGAGAGGAGAGAAAGATGTGTAAGAAATATTACAAATAATAACAATGTAAATAATTAAATTGTGATATAGTATTTCTTAGCACAATTGTGATCTTAGCAAACGGCTGGCAACTACAAAAACTT 500 15820468 0.966631548 27 476 3364 0.951822917 1.96082739 0.029947917 0.406 0.61328125 500 30 7 731 3L:15820439-15820619 6 379.5 1221 FBgn0036534 5151.046667 115.94 176.9933333 0.073674347 3.273244782 2.144148556 -4 -5 -4.5 0.25 dme-miR-14-3p 6mer2-7 AGACTG 3L 15956218 15956223 + 3L_15956218_15956223_+ 0.534986707 0.757369544 0.646178125 0.157248386 GXIVsPLA2 FBtr0075509|FBtr0273189|FBtr0333572 15956052|15955390|15956052 15956252|15956252|15956465 3L + 15956181 15956253 3'utr GXIVsPLA2 FlyBase G30661.1 CATTATTGTATACCAAATAGTGGCATGCCAACGGTCCAGACTGTTAAATACATTGATATTTTTACCTATTATA 71 15956224 0.711175127 9 66 364 0.931034483 1.607455023 0.091954023 0.197183099 0.344827586 71 5 1 81 3L:15956181-15956253 6 GXIVsPLA2 FBtr0333572|FBtr0273189 15956052|15955390 15956465|15956252 AGACTG 6mer2-7 dme-miR-14-3p 3L + 15956187 15956265 3'utr GXIVsPLA2 FlyBase G23193.1 TGTATACCAAATAGTGGCATGCCAACGGTCCAGACTGTTAAATACATTGATATTTTTACCTATTATAAAGATGCTATAT 46 15956224 0.723541952 9 43 233 0.897058824 1.785329835 0.014705882 0.347826087 0.558823529 46 7 0 61 3L:15956187-15956265 6 52 1222 FBgn0036545 264.6666667 31.66 47.96 0.196473552 1.642451042 1.084236864 -6 -6 -6 0.25 dme-miR-995-5p 6mer3-8 AATTCG 3L 15960901 15960906 - 3L_15960901_15960906_- 0.35486 0.397224002 0.376042001 0.029955872 l(3)72Ab FBtr0075527 15960834 15960993 3L - 15960862 15960958 3'utr l(3)72Ab FlyBase G37050.1 AAATGAAAATCAATCATTTTACAATTTACGCGCATTAATTGTAGCAATAATAAATTCGTGTACTACTTTAGTAGAAACCAAATTGTACAAGGATACA 29 15960900 0.979470124 8 28 226 0.971428571 1.230448921 0 0.206896552 0.342857143 29 0 1 34 3L:15960862-15960958 6 l(3)72Ab FBtr0075527 15960834 15960993 AATTCG 6mer3-8 dme-miR-995-5p 3L - 15960877 15960910 3'utr l(3)72Ab FlyBase G27974.1 AATAAATTCGTGTACTACTTTAGTAGAAACCAAA 10 15960900 0.807530463 2 9 74 1 1.113943352 0 0.3 0.461538462 10 0 0 13 3L:15960877-15960910 6 16 1223 FBgn0263599 2057.39 37.04 56.85333333 0.007776843 0.431965443 0.281425891 -6 -6 -6 0.25 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3L 15991754 15991761 + 3L_15991754_15991761_+ 0.563549655 0.552279786 0.557914721 0.007969023 Hip14 FBtr0333577 15990856 15992464 3L + 15991741 15991780 3'utr Hip14 FlyBase G30694.1 AATTATGCACTAGTCTAGTCAGAAAATTATTTAAGTAAAA 29 15991751 0.716583706 8 25 207 0.875 1.447158031 0.125 0.103448276 0.1875 29 4 0 28 3L:15991741-15991780 8 Hip14 FBtr0333577 15990856 15992464 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L + 15991738 15991804 3'utr Hip14 FlyBase G23218.1 TCTAATTATGCACTAGTCTAGTCAGAAAATTATTTAAGTAAAATGTTAAAGTGCAACTACAGCCACA 25 15991752 0.819522677 9 23 148 0.888888889 1.505149978 0.027777778 0.32 0.527777778 25 4 0 32 3L:15991738-15991804 8 25 1224 FBgn0259824 761.04 23.55 36.16 0.032849785 1.061571125 0.691371681 3 2 2.5 0.25 dme-miR-283-5p 6mer3-8 TGATAT 3L 15994508 15994513 - 3L_15994508_15994513_- 0.799127844 0.755412961 0.777270402 0.030911032 CG5830 FBtr0333579|FBtr0075521 15992667|15992667 15994730|15994730 3L - 15994469 15994525 3'utr CG5830 FlyBase G37117.1 ATAAGTTTTATATGATATACATAATTTTTACAGAACCCAATTTACACGGCACATTTG 13 15994510 0.857443896 3 12 118 0.933333333 0.84509804 0 0.153846154 0.266666667 13 0 1 14 3L:15994469-15994525 6 CG5830 FBtr0333579|FBtr0075521 15992667|15992667 15994730|15994730 TGATAT 6mer3-8 dme-miR-283-5p 3L - 15994473 15994523 3'utr CG5830 FlyBase G28017.1 AAGTTTTATATGATATACATAATTTTTACAGAACCCAATTTACACGGCACA 13 15994510 0.895769881 4 13 98 1 1.322219295 0.095238095 0.615384615 0.761904762 13 0 0 21 3L:15994473-15994523 6 8 1225 FBgn0036556 753.23 25.73 39.48333333 0.010620926 0.310921104 0.202617138 -3 -3 -3 0.25 dme-miR-14-3p 6mer2-7 AGACTG 3L 16032172 16032177 + 3L_16032172_16032177_+ 0.996867728 0.911673176 0.954270452 0.060241609 Notum FBtr0075435 16031340 16032752 3L + 16032126 16032196 3'utr Notum FlyBase G30709.1 TTGATAGTTTATGACCCGTTTAGGATTTTACTTGTGTGTGGAATCTAGACTGTTTCAAATGCCCCACGCAT 66 16032178 0.672011488 11 61 544 0.965116279 1.618048097 0.104651163 0.227272727 0.406976744 66 2 1 83 3L:16032126-16032196 6 Notum FBtr0075435 16031340 16032752 AGACTG 6mer2-7 dme-miR-14-3p 3L + 16032121 16032196 3'utr Notum FlyBase G23229.1 TTTATTTGATAGTTTATGACCCGTTTAGGATTTTACTTGTGTGTGGAATCTAGACTGTTTCAAATGCCCCACGCAT 53 16032178 0.930040603 12 49 453 0.925925926 1.875061263 0.135802469 0.41509434 0.617283951 53 6 0 75 3L:16032121-16032196 6 46.5 1226 FBgn0044028 1178.056667 37.54333333 57.65 0.039471785 1.238568765 0.8065915 -6 -6 -6 0.25 dme-miR-190-5p 8mer-A1 ACATATCA 3L 16032302 16032309 + 3L_16032302_16032309_+ 0.593493608 0.455081283 0.524287445 0.097872276 Notum FBtr0075435 16031340 16032752 3L + 16032243 16032336 3'utr Notum FlyBase G30710.1 TTATTTTGTACCTACCTCAGATCAGTAAGAATGAATGAAATTGATAAACAGCTGCCTTCACATATCATTGCGTACCTGTGCAACGAAAATCAAA 38 16032311 0.971031106 9 38 223 1 1.612783857 0.195121951 0.078947368 0.146341463 38 0 0 41 3L:16032243-16032336 8 Notum FBtr0075435 16031340 16032752 ACATATCA 8mer-A1 dme-miR-190-5p 3L + 16032241 16032368 3'utr Notum FlyBase G23230.1 ATTTATTTTGTACCTACCTCAGATCAGTAAGAATGAATGAAATTGATAAACAGCTGCCTTCACATATCATTGCGTACCTGTGCAACGAAAATCAAATACTTAATACTTAACTTAATACCGCCCGCATT 39 16032310 0.922475075 12 38 215 0.983606557 1.77815125 0.098360656 0.461538462 0.655737705 39 1 0 60 3L:16032241-16032368 8 20.5 1227 FBgn0044028 1178.056667 37.54333333 57.65 0.01740154 0.546035692 0.355594102 -9 -8 -8.5 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 16032591 16032598 + 3L_16032591_16032598_+ 0.494344557 0.494621824 0.49448319 0.00019601 Notum FBtr0075435 16031340 16032752 3L + 16032548 16032666 3'utr Notum FlyBase G30712.1 AAGCCTGTACAGAACTGGTTGAAGTTTAGCCCTAAGAATTGTTGTACTTAAACTTAGTGATAATCATAAACGTAATGCAATTCGCAAGCTTATTAGCTTTTGTTAGCGTTCTTCAAATG 87 16032590 0.972755261 10 82 776 0.951923077 1.995635195 0.115384615 0.16091954 0.298076923 87 5 0 99 3L:16032548-16032666 8 Notum FBtr0075435 16031340 16032752 GTACTTAA 8mer-A1 dme-miR-252-5p 3L + 16032544 16032617 3'utr Notum FlyBase G23231.1 TGCTAAGCCTGTACAGAACTGGTTGAAGTTTAGCCCTAAGAATTGTTGTACTTAAACTTAGTGATAATCATAAA 58 16032590 0.75971643 8 57 519 0.97752809 1.939519253 0.078651685 0.396551724 0.606741573 58 2 0 87 3L:16032544-16032617 8 61 1228 FBgn0044028 1178.056667 37.54333333 57.65 0.051780192 1.624789133 1.05810928 1 1 1 0.25 dme-miR-1003-3p 7mer-A1 TGTGAGA 3L 16081969 16081975 + 3L_16081969_16081975_+ 0.795997857 0.815125131 0.805561494 0.013524973 Mbs FBtr0112852|FBtr0112851|FBtr0301575|FBtr0301473|FBtr0308213|FBtr0308214|FBtr0301472|FBtr0308215|FBtr0112850 16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844 16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026 3L + 16081862 16081986 3'utr Mbs FlyBase G30741.2 CTGTTATTTATTAAATTCGCCTAAGAGATTTTGTGTTACTCGTAAATGGAAACGATAATCAAGCATAAACAACCATAAGAACGTGAATTGTGTAATATGTAAAATTGTGTGAGAAAATATTTATG 128 16081967 0.741365912 19 120 976 0.97260274 1.851258349 0.164383562 0.134920635 0.253424658 126 3 1 142 3L:16081862-16081986 7 Mbs FBtr0301472|FBtr0308215|FBtr0112850|FBtr0308214|FBtr0301473|FBtr0308213|FBtr0112852|FBtr0112851|FBtr0301575 16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844 16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026 TGTGAGA 7mer-A1 dme-miR-1003-3p 3L + 16081929 16082033 3'utr Mbs FlyBase G23257.1 AACAACCATAAGAACGTGAATTGTGTAATATGTAAAATTGTGTGAGAAAATATTTATGAAAATTTGATTCAAATACGAAACTTAATAAATGTGATCGCAAGCAAA 94 16081967 0.803345873 11 91 629 0.970149254 2.113943352 0.052238806 0.35106383 0.544776119 94 4 0 130 3L:16081929-16082033 7 58 1229 FBgn0005536 2947.596667 72.49666667 111.4433333 0.019677048 0.800036783 0.520443873 2 2 2 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 16088030 16088035 - 3L_16088030_16088035_- 0.88974889 0.919411635 0.904580262 0.020974696 CG5235 FBtr0333599|FBtr0075497 16087815|16087625 16088100|16088100 3L - 16087993 16088083 3'utr CG5235 FlyBase G37169.1 AAGTATTATTTAAGCCATCCAAAACGTTTTCAGTGAAAATGCTAGCTTACCAAATGAACGATTATCAAATATTCAAAATTATTCTCGTAAT 50 16088036 0.959429883 6 49 242 0.969230769 1.799340549 0.123076923 0.24 0.415384615 50 2 0 63 3L:16087993-16088083 6 CG5235 FBtr0333599|FBtr0075497 16087815|16087625 16088100|16088100 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 16087994 16088058 3'utr CG5235 FlyBase G28067.1 GTTTTCAGTGAAAATGCTAGCTTACCAAATGAACGATTATCAAATATTCAAAATTATTCTCGTAA 36 16088036 0.964036869 8 34 177 0.944444444 1.707570176 0.166666667 0.472222222 0.648148148 36 3 0 51 3L:16087994-16088058 6 39 1230 FBgn0036565 1024 48.82333333 74.77 0.038085938 0.798798389 0.521599572 1 1 1 0.25 dme-bantam-3p 6mer3-8 TGATCT 3L 16095599 16095604 + 3L_16095599_16095604_+ 0.983371471 0.648347833 0.815859652 0.23689753 ClC-c FBtr0333598|FBtr0302503|FBtr0075444 16095195|16095195|16095195 16096151|16095854|16095854 3L + 16095564 16095621 3'utr ClC-c FlyBase G30759.1 TATATGTTCACATACAGCTTGATAACACTATGAAATGATCTATAGTTGTAAAAGGAAC 15 16095600 0.742966812 6 15 111 1 1.230448921 0.411764706 0.133333333 0.235294118 15 0 0 17 3L:16095564-16095621 6 ClC-c FBtr0075444|FBtr0302503|FBtr0333598 16095195|16095195|16095195 16095854|16095854|16096151 TGATCT 6mer3-8 dme-bantam-3p 3L + 16095577 16095618 3'utr ClC-c FlyBase G23268.1 ACAGCTTGATAACACTATGAAATGATCTATAGTTGTAAAAGG 12 16095599 0.985004114 3 10 81 0.894736842 1.230448921 0.421052632 0.5 0.684210526 12 2 0 17 3L:16095577-16095618 6 12.5 1231 FBgn0036566 804.2333333 24.65333333 37.96666667 0.015542753 0.507030827 0.329236172 -1 0 -0.5 0.25 dme-miR-13b-2-5p 6mer2-7 TTGACG 3L 16120513 16120518 + 3L_16120513_16120518_+ 0.966393374 0.982650553 0.974521964 0.011495576 Taf4 FBtr0075449|FBtr0301911|FBtr0075450|FBtr0075448|FBtr0333291|FBtr0333290|FBtr0114589|FBtr0345951|FBtr0075451 16120071|16120071|16120071|16120071|16120071|16120071|16120071|16120071|16120071 16121368|16121368|16121368|16121651|16121368|16121368|16121368|16121368|16121368 3L + 16120493 16120545 3'utr Taf4 FlyBase G30785.1 TAATGTTTGCATCAACTGCATTGACGGCCTTATCTAAACGATATAAACATAAT 17 16120523 0.717692008 6 16 112 0.909090909 1.301029996 0.045454545 0.294117647 0.454545455 17 2 0 20 3L:16120493-16120545 6 Taf4 FBtr0333291|FBtr0114589|FBtr0333290|FBtr0345951|FBtr0075451|FBtr0075449|FBtr0301911|FBtr0075450|FBtr0075448 16120071|16120071|16120071|16120071|16120071|16120071|16120071|16120071|16120071 16121368|16121368|16121368|16121368|16121368|16121368|16121368|16121368|16121651 TTGACG 6mer2-7 dme-miR-13b-2-5p 3L + 16120501 16120535 3'utr Taf4 FlyBase G23289.1 GCATCAACTGCATTGACGGCCTTATCTAAACGATA 5 16120522 0.690117559 3 4 27 0.7 0.84509804 0 0.4 0.7 5 3 0 7 3L:16120501-16120535 6 10 1232 FBgn0010280 2452.246667 62.76333333 96.23333333 0.004077893 0.159328695 0.103914098 -10 -9 -9.5 0.25 dme-miR-999-3p 6mer3-8 AGTTAA 3L 16121480 16121485 + 3L_16121480_16121485_+ 0.980834191 0.957047131 0.968940661 0.01682002 Taf4 FBtr0075448 16120071 16121651 3L + 16121448 16121495 3'utr Taf4 FlyBase G30794.2 TTTATGTCGTATGGAATATGTAACGGTATCTCAGTTAATTAGCTAGTT 12 16121482 0.987204677 5 8 99 0.722222222 1.113943352 0.055555556 0.333333333 0.555555556 12 5 0 13 3L:16121448-16121495 6 Taf4 FBtr0075448 16120071 16121651 AGTTAA 6mer3-8 dme-miR-999-3p 3L + 16121451 16121500 3'utr Taf4 FlyBase G23296.1 ATGTCGTATGGAATATGTAACGGTATCTCAGTTAATTAGCTAGTTAAATC 11 16121482 0.989439887 4 8 91 0.705882353 1.079181246 0 0.363636364 0.588235294 11 5 0 12 3L:16121451-16121500 6 9.5 1233 FBgn0010280 2452.246667 62.76333333 96.23333333 0.003873999 0.15136226 0.098718393 -2 -2 -2 0.25 dme-miR-304-5p 6mer3-8 TGAGAT 3L 16136604 16136609 + 3L_16136604_16136609_+ 0.612527507 0.971516215 0.792021861 0.253843344 elg1 FBtr0089714|FBtr0307518|FBtr0089713 16136465|16136465|16136465 16136691|16136691|16136691 3L + 16136539 16136668 3'utr elg1 FlyBase G30829.1 CAGATCGTTTAAGAAGAGTTGATCTTTTTTAAGATAGCTTTGTGGACATGAAGATGTAGCTATTATGAGATAAACCTAGAACTATTTACAATTTAACTATGATAAACTAACTACGACCTCATCCTATGTT 16 16136604 0.980340902 11 15 115 0.952380952 1 0.047619048 0.1875 0.380952381 16 0 1 20 3L:16136539-16136668 6 elg1 FBtr0089714|FBtr0307518|FBtr0089713 16136465|16136465|16136465 16136691|16136691|16136691 TGAGAT 6mer3-8 dme-miR-304-5p 3L + 16136579 16136610 3'utr elg1 FlyBase G23322.1 TGTGGACATGAAGATGTAGCTATTATGAGATA 6 16136601 0.989423315 3 4 37 0.75 0.77815125 0 0.166666667 0.375 6 2 0 6 3L:16136579-16136610 6 4 1234 FBgn0036574 878.6533333 25.39 38.88333333 0.004552421 0.15754234 0.102871839 0 3 1.5 0.25 dme-miR-932-5p 6mer3-8 GGAATT 3L 16139512 16139517 - 3L_16139512_16139517_- 0.871580459 0.995697204 0.933638831 0.08776376 CG5151 FBtr0307521|FBtr0346525|FBtr0307519|FBtr0307520 16137800|16139499|16139499|16139499 16140460|16140460|16140460|16140460 3L - 16139506 16139553 3'utr CG5151 FlyBase G37208.1 AGTTCAATTGAAATTTGTATTTGTATATTTGCTAACGGAATTACGATG 8 16139541 0.992229324 7 7 78 0.888888889 0.903089987 0.222222222 0.125 0.222222222 8 1 0 8 3L:16139506-16139553 6 CG5151 FBtr0307519|FBtr0307520|FBtr0307521|FBtr0346525 16139499|16139499|16137800|16139499 16140460|16140460|16140460|16140460 GGAATT 6mer3-8 dme-miR-932-5p 3L - 16139509 16139562 3'utr CG5151 FlyBase G28094.1 ACAATTTTTAGTTCAATTGAAATTTGTATTTGTATATTTGCTAACGGAATTACG 7 16139539 0.992576415 6 7 78 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3L:16139509-16139562 6 2 1235 FBgn0036576 611.6966667 13.02666667 19.93 0.003269594 0.153531218 0.100351229 24 22 23 0.25 dme-bantam-3p 8mer-A1 TGATCTCA 3L 16230842 16230849 + 3L_16230842_16230849_+ 0.605289475 0.613941359 0.609615417 0.006117817 CG5027 FBtr0075457 16230770 16231139 3L + 16230792 16230866 3'utr CG5027 FlyBase G30835.1 TCTAGTGAAAGCTTTTGATTGCGAGTGAATGTTAGAGAAAGTAAATAAGATGATCTCATAGTGCATTTCCGAGCA 67 16230842 0.975587111 7 66 419 0.9875 1.897627091 0.5125 0.149253731 0.2875 67 1 0 79 3L:16230792-16230866 8 CG5027 FBtr0075457 16230770 16231139 TGATCTCA 8mer-A1 dme-bantam-3p 3L + 16230820 16230862 3'utr CG5027 FlyBase G23326.1 ATGTTAGAGAAAGTAAATAAGATGATCTCATAGTGCATTTCCG 58 16230842 0.796350367 5 53 362 0.905882353 1.886490725 0.564705882 0.362068966 0.564705882 58 8 0 77 3L:16230820-16230862 8 61 1236 FBgn0036579 214.6666667 14.06 21.50666667 0.284161491 4.338549075 2.83632982 0 0 0 0.25 dme-miR-31a-5p 8mer-A1 TCTTGCCA 3L 16236638 16236645 + 3L_16236638_16236645_+ 0.620500312 0.631092571 0.625796442 0.007489887 l(3)72Dp FBtr0075459 16236240 16236999 3L + 16236625 16236662 3'utr l(3)72Dp FlyBase G30844.1 AAGCGTTAAATATTCTTGCCAAATCAAGAGACTAATAT 8 16236637 0.703653725 3 8 57 1 0.954242509 0 0.125 0.222222222 8 0 0 9 3L:16236625-16236662 8 l(3)72Dp FBtr0075459 16236240 16236999 TCTTGCCA 8mer-A1 dme-miR-31a-5p 3L + 16236606 16236661 3'utr l(3)72Dp FlyBase G23333.1 AAAACAAAATTCTATCTTTAAGCGTTAAATATTCTTGCCAAATCAAGAGACTAATA 11 16236639 0.98601774 4 9 70 0.866666667 0.812913357 0.066666667 0.272727273 0.466666667 11 1 1 13 3L:16236606-16236661 8 9 1237 FBgn0263607 58 2.816666667 4.343333333 0.155172414 3.195266272 2.072141213 1 -1 0 0.25 dme-miR-1008-3p 6mer2-7 GCTGTG 3L 16372779 16372784 - 3L_16372779_16372784_- 0.95115289 0.971082121 0.961117506 0.014092072 roq FBtr0075423|FBtr0333265 16372435|16370936 16374520|16374520 3L - 16372766 16372808 3'utr roq FlyBase G37250.1 TTGGCGATATCCGCTCAGACTTTGGCTGTGGTGATGATGATTT 46 16372786 0.740223918 8 46 398 1 1.681241237 0.291666667 0.043478261 0.083333333 46 0 0 48 3L:16372766-16372808 6 roq FBtr0075423|FBtr0333265 16372435|16370936 16374520|16374520 GCTGTG 6mer2-7 dme-miR-1008-3p 3L - 16372772 16372807 3'utr roq FlyBase G28130.1 TGGCGATATCCGCTCAGACTTTGGCTGTGGTGATGA 30 16372786 0.718721147 5 30 244 1 1.698970004 0.18 0.366666667 0.62 30 0 0 50 3L:16372772-16372807 6 37.5 1238 FBgn0036621 1477.286667 40.04333333 61.43666667 0.025384376 0.936485474 0.610384678 2 2 2 0.25 dme-miR-1003-3p 7mer-A1 TGTGAGA 3L 16373475 16373481 - 3L_16373475_16373481_- 0.598301436 0.423652226 0.510976831 0.123495634 roq FBtr0075423|FBtr0333265|FBtr0331173 16372435|16370936|16373214 16374520|16374520|16374520 3L - 16373444 16373522 3'utr roq FlyBase G37252.1 AATAAATTAAAATCACGTCCCATTTTCCCCTTTTTGTAAACTGTGAGAAGAGTGAAGTACAGGAGAATTGACAAACAGG 10 16373488 0.982669797 7 9 63 0.9 0.954242509 0.2 0 0 10 1 0 9 3L:16373444-16373522 7 roq FBtr0331173|FBtr0075423|FBtr0333265 16373214|16372435|16370936 16374520|16374520|16374520 TGTGAGA 7mer-A1 dme-miR-1003-3p 3L - 16373466 16373519 3'utr roq FlyBase G28133.1 AAATTAAAATCACGTCCCATTTTCCCCTTTTTGTAAACTGTGAGAAGAGTGAAG 5 16373510 0.984506562 4 5 41 1 0.903089987 0 0.4 0.625 5 0 0 8 3L:16373466-16373519 7 3 1239 FBgn0036621 1477.286667 40.04333333 61.43666667 0.00203075 0.074918838 0.048830774 7 29 18 0.25 dme-miR-304-5p 6mer3-8 TGAGAT 3L 16373956 16373961 - 3L_16373956_16373961_- 0.745457727 0.761189655 0.753323691 0.011124204 roq FBtr0075423|FBtr0333265|FBtr0331173 16372435|16370936|16373214 16374520|16374520|16374520 3L - 16373922 16373986 3'utr roq FlyBase G37254.1 CAGCGAAGATTTTAAAGCAATTTTCTGAGATGAAATAGAGATACTGTGCACTAATTAACTGAATC 30 16373965 0.986502343 6 30 252 1 1.531478917 0 0.1 0.205882353 30 0 0 34 3L:16373922-16373986 6 roq FBtr0331173|FBtr0075423|FBtr0333265 16373214|16372435|16370936 16374520|16374520|16374520 TGAGAT 6mer3-8 dme-miR-304-5p 3L - 16373937 16373990 3'utr roq FlyBase G28135.2 ATAGCAGCGAAGATTTTAAAGCAATTTTCTGAGATGAAATAGAGATACTGTGCA 18 16373964 0.974481787 4 16 125 0.826086957 1.278753601 0.130434783 0.166666667 0.347826087 18 4 0 19 3L:16373937-16373990 6 22.5 1240 FBgn0036621 1477.286667 40.04333333 61.43666667 0.015230626 0.561891284 0.366230807 4 3 3.5 0.25 dme-miR-277-3p 7mer-m8 TGCATTT 3L 1638011 1638017 - 3L_1638011_1638017_- 0.620149028 0.619862641 0.620005834 0.000202515 metl FBtr0072814|FBtr0072813 1637940|1637940 1638040|1638040 3L - 1637994 1638037 3'utr metl FlyBase G33402.1 AATTTAGACGAATAGTTCTGTGCATTTTAAACCTTGTTCAAATC 5 1638018 0.985561738 5 5 43 1 0.954242509 0 0.6 0.777777778 5 0 0 9 3L:1637994-1638037 7 metl FBtr0072814|FBtr0072813 1637940|1637940 1638040|1638040 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 1637993 1638037 3'utr metl FlyBase G25265.1 AATTTAGACGAATAGTTCTGTGCATTTTAAACCTTGTTCAAATCA 6 1638012 0.992272545 5 5 52 0.7 0.84509804 0 0.5 0.7 6 3 0 7 3L:1637993-1638037 7 5.5 1241 FBgn0035247 536.0166667 56.80666667 87.84333333 0.010260875 0.096819622 0.062611467 1 -5 -2 0.25 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 16470650 16470657 - 3L_16470650_16470657_- 0.653337799 0.652595252 0.652966526 0.000525027 aos FBtr0075408 16470384 16471298 3L - 16470594 16470686 3'utr aos FlyBase G37291.1 CGAAGGCAGTTTGAAACTGTGGCAACTCTGGCAGCTATTTTAGTGCAATTTTTGTGACGCCTTCACAGCCACTTCTCCGGAATTTGAGCAAGT 1274 16470658 0.868090257 17 1256 9187 0.984866828 2.910357557 0.401331719 0.226059655 0.4031477 1274 24 1 1627 3L:16470594-16470686 8 aos FBtr0075408 16470384 16471298 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L - 16470587 16470688 3'utr aos FlyBase G28164.1 AGCGAAGGCAGTTTGAAACTGTGGCAACTCTGGCAGCTATTTTAGTGCAATTTTTGTGACGCCTTCACAGCCACTTCTCCGGAATTTGAGCAAGTAAATTAG 1016 16470658 0.981606195 18 1003 7362 0.987228608 2.411058239 0.344827586 0.382874016 0.599616858 1016 15 5 1546 3L:16470587-16470688 8 1133 1242 FBgn0004569 11.33333333 0.5 0.773333333 99.97058824 2266 1465.086207 1 1 1 0.25 dme-miR-14-3p 6mer3-8 AAGACT 3L 16491942 16491947 - 3L_16491942_16491947_- 0.970183667 0.543974193 0.75707893 0.301375628 CG43373 FBtr0307367 16491836 16507727 3L - 16491873 16491961 3'utr CG43373 FlyBase G37301.1 CGATTCCTAATAAAAAGACTTGAACCCAGAGCAGATATTGAATGCATTGCATTGAATATTTTGCCAATGTAAATCATTCCCATCAACAC 12 16491953 0.959026325 8 12 63 1 1.230448921 0.294117647 0.25 0.470588235 12 0 0 17 3L:16491873-16491961 6 CG43373 FBtr0307367 16491836 16507727 AAGACT 6mer3-8 dme-miR-14-3p 3L - 16491929 16491997 3'utr CG43373 FlyBase G28170.1 GAGGAGCACAAGAACTAGCCTGTGCAATAACTTTAACGATTCCTAATAAAAAGACTTGAACCCAGAGCA 9 16491952 0.97609129 5 6 35 0.777777778 0.84509804 0.444444444 0 0 9 2 0 7 3L:16491929-16491997 6 6.5 1243 FBgn0263131 3.073333333 0.063333333 0.1 2.114967462 102.6315789 65 6 5 5.5 0.25 dme-miR-282-5p 6mer2-7 GAGGCT 3L 16575964 16575969 + 3L_16575964_16575969_+ 0.515904765 0.911751117 0.713827941 0.279905603 mbf1 FBtr0075393|FBtr0305570|FBtr0305569|FBtr0075394 16575868|16575868|16575868|16575868 16576408|16576871|16576408|16576871 3L + 16575941 16575994 3'utr mbf1 FlyBase G30873.1 GAACCATCAACACACGGATTCTGGAGGCTGGAGCACTGTAAGCGGCAGACGCAA 8 16575961 0.93051506 3 7 28 1 1 0.7 0.125 0.3 8 0 0 10 3L:16575941-16575994 6 mbf1 FBtr0305570|FBtr0305569|FBtr0075394|FBtr0075393 16575868|16575868|16575868|16575868 16576871|16576408|16576871|16576408 GAGGCT 6mer2-7 dme-miR-282-5p 3L + 16575953 16575991 3'utr mbf1 FlyBase G23350.1 CACGGATTCTGGAGGCTGGAGCACTGTAAGCGGCAGACG 5 16575962 0.961839735 2 4 20 0.75 0.77815125 0.75 0.6 0.75 5 2 0 6 3L:16575953-16575991 6 5.5 1244 FBgn0262732 2231.09 243.8166667 374.3166667 0.002465163 0.022557933 0.014693441 3 2 2.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3L 16576661 16576667 + 3L_16576661_16576667_+ 0.657070626 0.655129538 0.656100082 0.001372565 mbf1 FBtr0305570|FBtr0075394 16575868|16575868 16576871|16576871 3L + 16576574 16576687 3'utr mbf1 FlyBase G30878.1 TATCGTGTAAGGCTCTTGAACTGTGCGTTTACTAATGCATTATACATATTATACAAAAACATATGCTAAATGTATTTAGAAACATTTTCTAGTCTACAAAATATTTAAATAATT 91 16576660 0.94012809 11 87 657 0.974137931 1.752048448 0.00862069 0.241758242 0.405172414 91 2 1 113 3L:16576574-16576687 7 mbf1 FBtr0305570|FBtr0075394 16575868|16575868 16576871|16576871 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 16576635 16576682 3'utr mbf1 FlyBase G23354.1 TATGCTAAATGTATTTAGAAACATTTTCTAGTCTACAAAATATTTAAA 61 16576660 0.923070235 6 61 428 1 1.886490725 0.012987013 0.196721311 0.363636364 61 0 0 77 3L:16576635-16576682 7 69 1245 FBgn0262732 2231.09 243.8166667 374.3166667 0.030926587 0.282999521 0.184335901 1 1 1 0.25 dme-bantam-3p 6mer3-8 TGATCT 3L 16589804 16589809 + 3L_16589804_16589809_+ 0.963749085 0.964077971 0.963913528 0.000232567 l(3)73Ah FBtr0075311|FBtr0307336 16589773|16589773 16590132|16590132 3L + 16589728 16589892 stop_codon l(3)73Ah FlyBase G30898.1 GGGATCCGCCGCTTCGGCTGCAGTTTCGTCCGCGGGTCGAGCTCTAACCACTGTTTTAGTATAATGCCACAACAAATGATCTATTTTTATAATTTATTGACAATGCGTAAATATCGTAATTAGGAGAGTCGCTAGTGTTAGTCCCCTCGAAACCATGAGTGTATG 151 16589804 0.98487165 21 149 1203 0.983695652 1.655618584 0.048913043 0.165562914 0.315217391 151 0 3 181 3L:16589728-16589892 6 l(3)73Ah FBtr0307336|FBtr0075311 16589773|16589773 16590132|16590132 TGATCT 6mer3-8 dme-bantam-3p 3L + 16589729 16589847 stop_codon l(3)73Ah FlyBase G23376.1 GGATCCGCCGCTTCGGCTGCAGTTTCGTCCGCGGGTCGAGCTCTAACCACTGTTTTAGTATAATGCCACAACAAATGATCTATTTTTATAATTTATTGACAATGCGTAAATATCGTAAT 98 16589804 0.91403582 13 93 817 0.922535211 2.117271296 0.014084507 0.346938776 0.549295775 98 11 0 131 3L:16589729-16589847 6 106.5 1246 FBgn0002283 168.7966667 15.21333333 23.25333333 0.63093663 7.000438212 4.579988532 0 0 0 0.25 dme-bantam-3p 6mer3-8 TGATCT 3L 16616544 16616549 - 3L_16616544_16616549_- 0.738061216 0.72096947 0.729515343 0.012085657 Abl FBtr0345369|FBtr0112790 16615864|16615864 16622773|16622773 3L - 16616516 16616563 3'utr Abl FlyBase G37369.2 TATGTCTATGATCATGATCTATATGTGCTCGGCGTAACCATTGCATAC 14 16616549 0.788815173 5 13 111 0.944444444 1.230448921 0.166666667 0.214285714 0.388888889 14 1 0 17 3L:16616516-16616563 6 Abl FBtr0345369|FBtr0112790 16615864|16615864 16622773|16622773 TGATCT 6mer3-8 dme-bantam-3p 3L - 16616514 16616565 3'utr Abl FlyBase G28219.1 TATATGTCTATGATCATGATCTATATGTGCTCGGCGTAACCATTGCATACAC 11 16616549 0.985251883 4 11 90 1 1.204119983 0 0.363636364 0.5625 11 0 0 16 3L:16616514-16616565 6 11 1247 FBgn0000017 169917.41 1653.646667 2554.62 6.47E-05 0.006651965 0.004305924 0 0 0 0.25 dme-miR-252-5p 6mer3-8 GTACTT 3L 16649304 16649309 - 3L_16649304_16649309_- 0.997881806 0.97704564 0.987463723 0.014733418 Baldspot FBtr0075355|FBtr0075356 16648440|16648839 16650074|16650074 3L - 16649294 16649329 3'utr Baldspot FlyBase G37413.1 AGTTGGGGTCTGAGAACTTTGTACTTCTAAGTCTAT 10 16649309 0.670045333 4 10 86 1 1.079181246 0.166666667 0.2 0.333333333 10 0 0 12 3L:16649294-16649329 6 Baldspot FBtr0075356|FBtr0075355 16648839|16648440 16650074|16650074 GTACTT 6mer3-8 dme-miR-252-5p 3L - 16649292 16649329 3'utr Baldspot FlyBase G28254.1 AGTTGGGGTCTGAGAACTTTGTACTTCTAAGTCTATAC 6 16649309 0.984309826 5 6 46 1 0.954242509 0.333333333 0.5 0.666666667 6 0 0 9 3L:16649292-16649329 6 7 1248 FBgn0260960 2360.606667 103.09 158.2033333 0.002965339 0.067901833 0.044246855 0 0 0 0.25 dme-bantam-3p 6mer3-8 TGATCT 3L 16662769 16662774 - 3L_16662769_16662774_- 0.498974867 0.827931653 0.66345326 0.232607584 Galphaf FBtr0075354 16662555 16662848 3L - 16662758 16662796 3'utr Galphaf FlyBase G37424.1 GTCCTCAGGCCCCCACCAACTGTGATCTAGTAGGATATG 17 16662769 0.938051367 3 17 68 1 1.342422681 0.318181818 0.294117647 0.454545455 17 0 0 22 3L:16662758-16662796 6 Galphaf FBtr0075354 16662555 16662848 TGATCT 6mer3-8 dme-bantam-3p 3L - 16662763 16662790 3'utr Galphaf FlyBase G28261.1 AGGCCCCCACCAACTGTGATCTAGTAGG 6 16662769 0.92378564 3 6 21 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 3L:16662763-16662790 6 11.5 1249 FBgn0010223 69.33333333 4.69 7.25 0.165865385 2.452025586 1.586206897 -5 -5 -5 0.25 dme-miR-252-5p 6mer3-8 GTACTT 3L 16672363 16672368 - 3L_16672363_16672368_- 0.999996146 0.555609313 0.77780273 0.31422892 zetaCOP FBtr0075353 16671937 16672420 3L - 16672353 16672454 lincRNA_exon-lincRNA_intron zetaCOP FlyBase G37429.1 GGTAACTAACACCCTTAATGGTCTATTTTGGTAGTCTAACTACTTGGTAGCTCTTCTAAGTGTTTATAACTCAATGGTAGCCGTTTGTACTTTAATTTTGTC 28 16672380 0.988376901 11 26 263 0.935483871 1.462397998 0.096774194 0.107142857 0.193548387 28 2 0 29 3L:16672353-16672454 6 zetaCOP FBtr0075353 16671937 16672420 GTACTT 6mer3-8 dme-miR-252-5p 3L - 16672342 16672397 3'utr zetaCOP FlyBase G28266.1 AAGTGTTTATAACTCAATGGTAGCCGTTTGTACTTTAATTTTGTCTGGTTTCGTTT 10 16672380 0.986322987 4 10 92 1 1.041392685 0 0.1 0.181818182 10 0 0 11 3L:16672342-16672397 6 13 1250 FBgn0040512 644 115.9 176.2033333 0.020186335 0.11216566 0.0737784 12 12 12 0.25 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3L 16723835 16723842 + 3L_16723835_16723842_+ 0.630510582 0.631096451 0.630803517 0.000414294 Dab FBtr0305085|FBtr0305084|FBtr0333625|FBtr0330190|FBtr0305086|FBtr0333626|FBtr0330189|FBtr0075318 16723340|16723340|16723340|16723748|16723340|16723340|16723748|16723340 16724415|16724415|16724415|16724415|16724415|16724415|16724415|16724575 3L + 16723821 16723847 3'utr Dab FlyBase G30935.1 ATTCGCCACATATATCTAGTCAACTCA 13 16723833 0.711802589 3 13 81 1 1.255272505 0 0.307692308 0.5 13 0 0 18 3L:16723821-16723847 8 Dab FBtr0330189|FBtr0075318|FBtr0305086|FBtr0333626|FBtr0333625|FBtr0330190|FBtr0305085|FBtr0305084 16723748|16723340|16723340|16723340|16723340|16723748|16723340|16723340 16724415|16724575|16724415|16724415|16724415|16724415|16724415|16724415 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L + 16723811 16723850 3'utr Dab FlyBase G23405.1 ACGATATTTAATTCGCCACATATATCTAGTCAACTCAATC 6 16723834 0.97049004 4 6 41 1 1 0 0.5 0.7 6 0 0 10 3L:16723811-16723850 8 9.5 1251 FBgn0000414 579.9766667 8.573333333 13.19 0.016379969 1.108087092 0.720242608 2 1 1.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 16777524 16777529 - 3L_16777524_16777529_- 0.921459335 0.984195881 0.952827608 0.044361475 CG13025 FBtr0333610|FBtr0333610|FBtr0333610|FBtr0075346|FBtr0075346|FBtr0075346 16777447|16777447|16777447|16776529|16776529|16776529 16777593|16777593|16777593|16777593|16777593|16777593 3L - 16777487 16777539 3'utr CG13025 FlyBase G37456.1 TAGCTAATTTCTGTGAAATATGTGACTACTGATATAAACGAGCTTTTAAGCTA 14 16777531 0.721034062 7 10 108 0.777777778 1.146128036 0.222222222 0.214285714 0.388888889 14 4 0 14 3L:16777487-16777539 6 CG13025 FBtr0075346|FBtr0075346|FBtr0075346|FBtr0333610|FBtr0333610|FBtr0333610 16776529|16776529|16776529|16777447|16777447|16777447 16777593|16777593|16777593|16777593|16777593|16777593 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 16777483 16777543 3'utr CG13025 FlyBase G28288.1 CTTTTAGCTAATTTCTGTGAAATATGTGACTACTGATATAAACGAGCTTTTAAGCTAAGTT 22 16777531 0.684653915 8 21 183 0.962962963 1.113943352 0.222222222 0.227272727 0.37037037 22 0 1 26 3L:16777483-16777543 6 14 1252 FBgn0036660 194.1566667 10.47 16.01333333 0.072106718 1.337153773 0.87427144 2 2 2 0.25 dme-miR-277-3p 6mer3-8 TGCATT 3L 16785143 16785148 + 3L_16785143_16785148_+ 0.999586616 0.999887481 0.999737048 0.000212768 CG9706 FBtr0075326|FBtr0075327 16785050|16785050 16785246|16785246 3L + 16785114 16785192 3'utr CG9706 FlyBase G30945.1 AACAACTAATTCTAGGATTAGCAGACGTTTGCATTCTGTAGGCTAGCGAAATTACAAATTCCCGCCTTGGTATTGTTTT 23 16785150 0.957349062 8 23 165 1 1.477121255 0.033333333 0.304347826 0.466666667 23 0 0 30 3L:16785114-16785192 6 CG9706 FBtr0075326|FBtr0075327 16785050|16785050 16785246|16785246 TGCATT 6mer3-8 dme-miR-277-3p 3L + 16785121 16785164 3'utr CG9706 FlyBase G23415.1 AATTCTAGGATTAGCAGACGTTTGCATTCTGTAGGCTAGCGAAA 9 16785142 0.974375068 3 9 61 1 1.204119983 0.375 0.555555556 0.75 9 0 0 16 3L:16785121-16785164 6 12.5 1253 FBgn0036662 379.6666667 23.33333333 36.06666667 0.032923617 0.535714286 0.346580407 -7 1 -3 0.25 dme-bantam-3p 7mer-m8 TGATCTC 3L 16787891 16787897 - 3L_16787891_16787897_- 0.555375401 0.387733973 0.471554687 0.118540371 CG9674 FBtr0345074|FBtr0305916|FBtr0333608|FBtr0075344 16787571|16787571|16787571|16787571 16792436|16788409|16788409|16788409 3L - 16787882 16787909 3'utr CG9674 FlyBase G37477.1 AAATTGATATGCTGATCTCCACCATCCT 15 16787898 0.690610132 4 12 90 0.909090909 1.301029996 0.454545455 0.2 0.454545455 15 2 0 20 3L:16787882-16787909 7 CG9674 FBtr0075344|FBtr0305916|FBtr0333608|FBtr0345074 16787571|16787571|16787571|16787571 16788409|16788409|16788409|16792436 TGATCTC 7mer-m8 dme-bantam-3p 3L - 16787882 16787911 3'utr CG9674 FlyBase G28307.1 GAAAATTGATATGCTGATCTCCACCATCCT 13 16787897 0.718071018 3 11 75 0.764705882 0.636822098 0.529411765 0.307692308 0.470588235 13 2 2 13 3L:16787882-16787911 7 14 1254 FBgn0036663 1912.666667 32.48 50.08 0.007319624 0.431034483 0.279552716 1 0 0.5 0.25 dme-miR-8-3p 6mer3-8 CAGTAT 3L 16789590 16789595 - 3L_16789590_16789595_- 0.99999569 0.997188803 0.998592246 0.001984778 CG9674 FBtr0345074|FBtr0333609|FBtr0305915 16787571|16788247|16788247 16792436|16792331|16792331 3L - 16789574 16789622 5'utr CG9674 FlyBase G37486.1 CGCAACGATCGCGTTGGTGGACTTTTGCAGTATGGTATTCCCACGATGA 11 16789606 0.851354766 6 11 78 1 1.230448921 0.294117647 0.454545455 0.647058824 11 0 0 17 3L:16789574-16789622 6 CG9674 FBtr0333609|FBtr0305915|FBtr0345074 16788247|16788247|16787571 16792331|16792331|16792436 CAGTAT 6mer3-8 dme-miR-8-3p 3L - 16789554 16789625 5'utr CG9674 FlyBase G28311.1 GAGCGCAACGATCGCGTTGGTGGACTTTTGCAGTATGGTATTCCCACGATGAAGCTTTCCAAGGAGGTGGTC 7 16789598 0.983758966 4 7 55 1 1.113943352 0.384615385 0.428571429 0.692307692 7 0 0 13 3L:16789554-16789625 6 5.5 1255 FBgn0036663 1912.666667 32.48 50.08 0.002875566 0.169334975 0.109824281 11 3 7 0.25 dme-miR-307a-3p 7mer-m8 GGTTGTG 3L 16791639 16791645 - 3L_16791639_16791645_- 0.585685633 0.570176522 0.577931078 0.01096659 CG9674 FBtr0345074|FBtr0333609|FBtr0305915 16787571|16788247|16788247 16792436|16792331|16792331 3L - 16791617 16791691 intron-5'utr CG9674 FlyBase G37491.1 GTGTGATTGTTCAGGCTGATGGACAGCTCCGCACAGGATTCGATGTGGTTGTGGCTGCACTGCTGGGTGCTGATG 12 16791642 0.972398425 9 12 76 1 1.146128036 0.214285714 0.166666667 0.285714286 12 0 0 14 3L:16791617-16791691 7 CG9674 FBtr0333609|FBtr0305915|FBtr0345074 16788247|16788247|16787571 16792331|16792331|16792436 GGTTGTG 7mer-m8 dme-miR-307a-3p 3L - 16791630 16791660 5'utr CG9674 FlyBase G28316.1 CACAGGATTCGATGTGGTTGTGGCTGCACTG 8 16791646 0.693964738 4 8 53 1 1.146128036 0.571428571 0.5 0.714285714 8 0 0 14 3L:16791630-16791660 7 7.5 1256 FBgn0036663 1912.666667 32.48 50.08 0.003921227 0.23091133 0.149760383 -3 1 -1 0.25 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 16994830 16994836 - 3L_16994830_16994836_- 0.66702983 0.755825586 0.711427708 0.062788112 CG3764 FBtr0321285|FBtr0075297|FBtr0332122 16994715|16994715|16994715 16995408|16995408|16995408 3L - 16994823 16994858 3'utr CG3764 FlyBase G37507.1 AAGTTTAGAATACGCTAGGGATGCAGCTACTAAAAT 35 16994837 0.819794337 4 32 162 0.925 0.966141733 0.225 0.114285714 0.225 35 0 3 37 3L:16994823-16994858 7 CG3764 FBtr0332122|FBtr0321285|FBtr0075297 16994715|16994715|16994715 16995408|16995408|16995408 GCAGCTA 7mer-A1 dme-miR-980-3p 3L - 16994823 16994858 3'utr CG3764 FlyBase G28331.1 AAGTTTAGAATACGCTAGGGATGCAGCTACTAAAAT 29 16994837 0.797038955 4 26 112 0.930232558 1.301029996 0.11627907 0.379310345 0.581395349 29 2 1 40 3L:16994823-16994858 7 31.5 1257 FBgn0036684 919.4833333 18.43 28.02333333 0.03425837 1.709169832 1.124063281 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 16995271 16995277 - 3L_16995271_16995277_- 0.793479121 0.793004276 0.793241698 0.000335734 CG3764 FBtr0321285|FBtr0321285|FBtr0321285|FBtr0075297|FBtr0075297|FBtr0075297|FBtr0332122|FBtr0332122|FBtr0332122 16994715|16994715|16994715|16994715|16994715|16994715|16994715|16994715|16994715 16995408|16995408|16995408|16995408|16995408|16995408|16995408|16995408|16995408 3L - 16995191 16995444 stop_codon CG3764 FlyBase G37509.2 AAGATCAGCCGCAAGTGCGGCATCAGCTTCAGGTGACAGGTTGTTGCCGTCTGCTGAGCTAGGACATTGCCAAACATTTTATCACTCAACGTTTCAAAGAGCTCTTCTCATGCATCATCCAAAGCGAAACAAGCAAATACTCCAGCGAATTTTAATTTCACTGATTTTGTGATATATTTATATATGTGTAGGAATCTAGCGCCTAAATGCAGGATACGTTTATGAGCCGTAGCTTAGCCGTAGCCCTCGAACGA 438 16995279 0.941714361 46 399 4122 0.914342629 1.457692703 0.109561753 0.116438356 0.229083665 438 28 15 459 3L:16995191-16995444 7 CG3764 FBtr0332122|FBtr0332122|FBtr0332122|FBtr0321285|FBtr0321285|FBtr0321285|FBtr0075297|FBtr0075297|FBtr0075297 16994715|16994715|16994715|16994715|16994715|16994715|16994715|16994715|16994715 16995408|16995408|16995408|16995408|16995408|16995408|16995408|16995408|16995408 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 16995196 16995461 stop_codon CG3764 FlyBase G28333.2 CATATATTCACACGCCCAAGATCAGCCGCAAGTGCGGCATCAGCTTCAGGTGACAGGTTGTTGCCGTCTGCTGAGCTAGGACATTGCCAAACATTTTATCACTCAACGTTTCAAAGAGCTCTTCTCATGCATCATCCAAAGCGAAACAAGCAAATACTCCAGCGAATTTTAATTTCACTGATTTTGTGATATATTTATATATGTGTAGGAATCTAGCGCCTAAATGCAGGATACGTTTATGAGCCGTAGCTTAGCCGTAGCCCTCG 313 16995279 0.989109754 38 262 2654 0.856275304 1.450249108 0.133603239 0.38658147 0.611336032 313 57 14 423 3L:16995196-16995461 7 193.5 1258 FBgn0036684 919.4833333 18.43 28.02333333 0.210444271 10.49918611 6.904960152 2 2 2 0.25 dme-bantam-3p 6mer2-7 GATCTC 3L 17037468 17037473 - 3L_17037468_17037473_- 0.780337121 0.996715802 0.888526461 0.153002846 scaf6 FBtr0345067 17036857 17039577 3L - 17037447 17037486 5'utr scaf6 FlyBase G37552.1 AAGGGTCGCAATCGATCTCCTCGCCACGAACGGGACAACA 6 17037466 0.940005926 2 6 24 1 0.77815125 0.166666667 0 0 6 0 0 6 3L:17037447-17037486 6 scaf6 FBtr0345067 17036857 17039577 GATCTC 6mer2-7 dme-bantam-3p 3L - 17037455 17037496 5'utr scaf6 FlyBase G28362.1 TAACAACCGCAAGGGTCGCAATCGATCTCCTCGCCACGAACG 6 17037475 0.937522995 3 6 24 1 0.903089987 0.5 0.333333333 0.5 6 0 0 8 3L:17037455-17037496 6 6 1259 FBgn0261872 719.3333333 34.71333333 53.11 0.008341057 0.172844248 0.112973075 -7 2 -2.5 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3L 17041316 17041322 - 3L_17041316_17041322_- 0.821088172 0.818054559 0.819571365 0.002145079 scaf6 FBtr0301554 17040932 17041684 3L - 17041291 17041347 5'utr scaf6 FlyBase G37556.1 ATATACTTTCGGACTTAAATGATTTCCAAAGATATTGTCATAGACTCATAGATGGCA 6 17041324 0.98004601 3 6 48 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3L:17041291-17041347 7 scaf6 FBtr0301554 17040932 17041684 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 17041292 17041338 5'utr scaf6 FlyBase G28366.1 CGGACTTAAATGATTTCCAAAGATATTGTCATAGACTCATAGATGGC 10 17041324 0.753904865 4 10 71 1 1.041392685 0 0.1 0.181818182 10 0 0 11 3L:17041292-17041338 7 7 1260 FBgn0261872 719.3333333 34.71333333 53.11 0.009731233 0.201651623 0.131801921 2 2 2 0.25 dme-miR-932-5p 7mer-A1 GAATTGA 3L 17054769 17054775 + 3L_17054769_17054775_+ 0.820501543 0.820983861 0.820742702 0.000341108 rogdi FBtr0075282|FBtr0075283 17054365|17054365 17055454|17055454 3L + 17054726 17054822 3'utr rogdi FlyBase G31086.1 CTCCAATTATGCATCAAAATGCATCTAAATAGCATTAGGCTGAGAATTGAGAACAGAGAACGTTTGTGAAAACCAATTGTGTTTGTATGTGTAACAA 53 17054760 0.927686308 10 53 244 1 1.806179974 0.265625 0.132075472 0.28125 53 0 0 64 3L:17054726-17054822 7 rogdi FBtr0075283|FBtr0075282 17054365|17054365 17055454|17055454 GAATTGA 7mer-A1 dme-miR-932-5p 3L + 17054746 17054821 3'utr rogdi FlyBase G23516.1 GCATCTAAATAGCATTAGGCTGAGAATTGAGAACAGAGAACGTTTGTGAAAACCAATTGTGTTTGTATGTGTAACA 36 17054772 0.688269252 8 35 150 1 1.77815125 0.133333333 0.444444444 0.666666667 36 0 0 60 3L:17054746-17054821 7 35 1261 FBgn0036697 653.9633333 39.12 59.84 0.05351982 0.894683027 0.584893048 9 -3 3 0.25 dme-miR-252-5p 7mer-m8 GTACTTA 3L 17055319 17055325 + 3L_17055319_17055325_+ 0.561560918 0.559128837 0.560344877 0.001719754 rogdi FBtr0075282|FBtr0075283 17054365|17054365 17055454|17055454 3L + 17055306 17055331 3'utr rogdi FlyBase G31088.1 AACAATTACCACTGTACTTATTGAAT 8 17055318 0.7761632 3 8 58 1 1.041392685 0 0.375 0.545454545 8 0 0 11 3L:17055306-17055331 7 rogdi FBtr0075283|FBtr0075282 17054365|17054365 17055454|17055454 GTACTTA 7mer-m8 dme-miR-252-5p 3L + 17055299 17055328 3'utr rogdi FlyBase G23518.1 CAACGAAAACAATTACCACTGTACTTATTG 8 17055318 0.96245563 3 7 52 0.909090909 1 0.636363636 0.25 0.454545455 8 1 0 10 3L:17055299-17055328 7 8 1262 FBgn0036697 653.9633333 39.12 59.84 0.012233102 0.204498978 0.13368984 1 1 1 0.25 dme-miR-283-5p 8mer-m1 TGATATTT 3L 174070 174077 + 3L_174070_174077_+ 0.499688194 0.477357486 0.48852284 0.015790189 p130CAS FBtr0299866|FBtr0072475|FBtr0299864|FBtr0299865|FBtr0301889 173907|173907|173907|173907|173907 174517|174517|174517|174517|174517 3L + 174048 174092 3'utr p130CAS FlyBase G26680.1 TTGCCGCTTATATTTTGCATTGTGATATTTTGAGCAAAACATCTG 23 174067 0.988120099 9 20 254 0.891891892 1.041392685 0.054054054 0.347826087 0.594594595 23 2 2 33 3L:174048-174092 8 p130CAS FBtr0299865|FBtr0299864|FBtr0072475|FBtr0299866|FBtr0301889 173907|173907|173907|173907|173907 174517|174517|174517|174517|174517 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 174049 174086 3'utr p130CAS FlyBase G20176.1 TGCCGCTTATATTTTGCATTGTGATATTTTGAGCAAAA 16 174066 0.664186215 5 14 176 0.769230769 0.823908741 0.269230769 0.4375 0.653846154 16 4 2 20 3L:174049-174086 8 19.5 1263 FBgn0035101 655.3333333 27.27 41.73 0.029755849 0.715071507 0.46728972 3 4 3.5 0.25 dme-miR-970-3p 8mer-A1 TCTTATGA 3L 17477817 17477824 - 3L_17477817_17477824_- 0.627406746 0.628112022 0.627759384 0.000498722 CG13733 FBtr0075225 17477793 17477948 3L - 17477810 17477841 3'utr CG13733 FlyBase G37602.1 ACATACATATATAGATCTCTTATGAACAGTAA 30 17477822 0.702536344 4 30 224 1 1.633468456 0 0.266666667 0.488372093 30 0 0 43 3L:17477810-17477841 8 CG13733 FBtr0075225 17477793 17477948 TCTTATGA 8mer-A1 dme-miR-970-3p 3L - 17477811 17477841 3'utr CG13733 FlyBase G28400.1 ACATACATATATAGATCTCTTATGAACAGTA 23 17477821 0.71618281 5 23 174 1 1.544068044 0 0.391304348 0.6 23 0 0 35 3L:17477811-17477841 8 26.5 1264 FBgn0036729 1.666666667 0.2 0.32 15.9 132.5 82.8125 -2 -3 -2.5 0.25 dme-miR-92b-3p 6mer3-8 GTGCAA 3L 17511461 17511466 + 3L_17511461_17511466_+ 0.820562728 0.811237479 0.815900104 0.006593912 Oatp74D FBtr0075173|FBtr0345117|FBtr0345118|FBtr0302041 17511094|17511094|17511094|17511094 17511693|17511693|17511693|17511693 3L + 17511439 17511476 3'utr Oatp74D FlyBase G31136.1 TACTACAAACTGATCGACAATTGTGCAAAGTGCAAGAA 16 17511459 0.749004196 3 16 72 1 1.322219295 0.333333333 0.3125 0.476190476 16 0 0 21 3L:17511439-17511476 6 Oatp74D FBtr0302041|FBtr0345118|FBtr0345117|FBtr0075173 17511094|17511094|17511094|17511094 17511693|17511693|17511693|17511693 GTGCAA 6mer3-8 dme-miR-92b-3p 3L + 17511439 17511471 3'utr Oatp74D FlyBase G23553.1 TACTACAAACTGATCGACAATTGTGCAAAGTGC 16 17511459 0.729533522 2 14 79 0.884615385 1.06069784 0.807692308 0.4375 0.653846154 16 2 1 23 3L:17511439-17511471 6 15 1265 FBgn0036732 1106.486667 32.79 50.10666667 0.013556422 0.457456542 0.299361362 2 2 2 0.25 dme-miR-92b-3p 6mer3-8 GTGCAA 3L 17525937 17525942 - 3L_17525937_17525942_- 0.914276446 0.93214299 0.923209718 0.012633594 Edc3 FBtr0075208 17525331 17526958 3L - 17525921 17526032 3'utr Edc3 FlyBase G37610.1 CATCGAATACTAAAAAGAAACCACAACACAATACTTATAATATAAACTGTAGAGCGATTAATTTTATATAAGATTAAATCCAATCTAATAGTGCAAAATTTTAGAAGGTTGC 32 17525944 0.982202803 5 31 222 0.948717949 1.568201724 0 0.1875 0.333333333 32 2 0 37 3L:17525921-17526032 6 Edc3 FBtr0075208 17525331 17526958 GTGCAA 6mer3-8 dme-miR-92b-3p 3L - 17525919 17525985 3'utr Edc3 FlyBase G28407.1 TGTAGAGCGATTAATTTTATATAAGATTAAATCCAATCTAATAGTGCAAAATTTTAGAAGGTTGCGA 20 17525944 0.980601489 3 19 141 1 1.462397998 0 0.3 0.517241379 20 0 0 29 3L:17525919-17525985 6 21.5 1266 FBgn0036735 1377.103333 41.10333333 63.21333333 0.015612481 0.523071933 0.340118119 2 2 2 0.25 dme-miR-7-5p 6mer3-8 GTCTTC 3L 17526409 17526414 - 3L_17526409_17526414_- 0.916447463 0.966068526 0.941257995 0.035087346 Edc3 FBtr0075208 17525331 17526958 3L - 17526393 17526442 3'utr Edc3 FlyBase G37613.1 TTACAATTCACTGTCCTTCCTGCAAGTGGTCTTCATAATCGTAAACAACA 16 17526416 0.85685172 3 16 136 1 1.204119983 0 0 0 16 0 0 16 3L:17526393-17526442 6 Edc3 FBtr0075208 17525331 17526958 GTCTTC 6mer3-8 dme-miR-7-5p 3L - 17526390 17526445 3'utr Edc3 FlyBase G28410.1 AATTTACAATTCACTGTCCTTCCTGCAAGTGGTCTTCATAATCGTAAACAACAAAT 15 17526416 0.905317979 5 12 121 0.769230769 1.301029996 0.076923077 0.466666667 0.692307692 15 6 0 20 3L:17526390-17526445 6 13 1267 FBgn0036735 1377.103333 41.10333333 63.21333333 0.009440105 0.316276052 0.205652816 2 2 2 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 17526799 17526804 - 3L_17526799_17526804_- 0.99577382 0.99956709 0.997670455 0.002682268 Edc3 FBtr0075208|FBtr0075208|FBtr0075208 17525331|17525331|17525331 17526958|17526958|17526958 3L - 17526739 17526857 3'utr Edc3 FlyBase G37616.1 AACAATAACAATGACACACCCGCACACTTGTGATGATCATCAAGTCCAGTTTCCTGTGAATCTAGCTCTTAGTACTCTTCTCTCATATATTACTCAAGTTAAACATTTTGTTCTACGGC 151 17526829 0.986511311 23 133 1144 0.876344086 1.257945095 0.080645161 0.17218543 0.327956989 151 15 8 163 3L:17526739-17526857 6 Edc3 FBtr0075208|FBtr0075208|FBtr0075208 17525331|17525331|17525331 17526958|17526958|17526958 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 17526764 17526847 3'utr Edc3 FlyBase G28414.1 ATGACACACCCGCACACTTGTGATGATCATCAAGTCCAGTTTCCTGTGAATCTAGCTCTTAGTACTCTTCTCTCATATATTACT 110 17526808 0.796905252 19 99 883 0.911949686 1.207125493 0.100628931 0.345454545 0.547169811 110 6 8 145 3L:17526764-17526847 6 58 1268 FBgn0036735 1377.103333 41.10333333 63.21333333 0.042117391 1.411077771 0.917527948 25 4 14.5 0.25 dme-miR-2a-2-5p 6mer3-8 TGATGA 3L 17526822 17526827 - 3L_17526822_17526827_- 0.690500542 0.612054134 0.651277338 0.055469981 Edc3 FBtr0075208 17525331 17526958 3L - 17526739 17526857 3'utr Edc3 FlyBase G37616.1 AACAATAACAATGACACACCCGCACACTTGTGATGATCATCAAGTCCAGTTTCCTGTGAATCTAGCTCTTAGTACTCTTCTCTCATATATTACTCAAGTTAAACATTTTGTTCTACGGC 151 17526829 0.986511311 23 133 1144 0.876344086 1.257945095 0.080645161 0.17218543 0.327956989 151 15 8 163 3L:17526739-17526857 6 Edc3 FBtr0075208 17525331 17526958 TGATGA 6mer3-8 dme-miR-2a-2-5p 3L - 17526764 17526847 3'utr Edc3 FlyBase G28414.1 ATGACACACCCGCACACTTGTGATGATCATCAAGTCCAGTTTCCTGTGAATCTAGCTCTTAGTACTCTTCTCTCATATATTACT 110 17526808 0.796905252 19 99 883 0.911949686 1.207125493 0.100628931 0.345454545 0.547169811 110 6 8 145 3L:17526764-17526847 6 51.5 1269 FBgn0036735 1377.103333 41.10333333 63.21333333 0.037397339 1.252939745 0.81470154 2 -19 -8.5 0.25 dme-miR-252-5p 7mer-m8 GTACTTA 3L 17545826 17545832 + 3L_17545826_17545832_+ 0.58624428 0.58817763 0.587210955 0.00136705 Nedd4 FBtr0300520|FBtr0299642|FBtr0331843|FBtr0299647|FBtr0299645|FBtr0299648|FBtr0300519|FBtr0331844|FBtr0299646 17545609|17545609|17545609|17545609|17545609|17545609|17545609|17545609|17545609 17546376|17546376|17546376|17546376|17546376|17546376|17546660|17546376|17546376 3L + 17545812 17545897 3'utr Nedd4 FlyBase G31149.1 CGCCAGCAGATCGTGTACTTATTTGTTCGTTTGCTTTTGTATTATAATCATTTTTGCTAGTTTAGTGTTATTTCGTATGTATTTTA 23 17545825 0.991552874 9 19 214 0.892857143 0.920818754 0.142857143 0.173913043 0.321428571 23 1 2 25 3L:17545812-17545897 7 Nedd4 FBtr0299646|FBtr0331844|FBtr0300519|FBtr0299648|FBtr0299645|FBtr0299647|FBtr0331843|FBtr0299642|FBtr0300520 17545609|17545609|17545609|17545609|17545609|17545609|17545609|17545609|17545609 17546376|17546376|17546660|17546376|17546376|17546376|17546376|17546376|17546376 GTACTTA 7mer-m8 dme-miR-252-5p 3L + 17545811 17545847 3'utr Nedd4 FlyBase G23564.2 CCGCCAGCAGATCGTGTACTTATTTGTTCGTTTGCTT 21 17545833 0.648828154 6 17 172 0.787878788 0.716003344 0.121212121 0.333333333 0.575757576 21 3 4 26 3L:17545811-17545847 7 17.5 1270 FBgn0259174 1914.91 63.1 97.11 0.009138811 0.277337559 0.180208012 1 -7 -3 0.25 dme-miR-79-3p 7mer-m8 TAGCTTT 3L 17551897 17551903 - 3L_17551897_17551903_- 0.616684662 0.59313837 0.604911516 0.016649748 CycT FBtr0333125|FBtr0333124 17551002|17551002 17552803|17552803 3L - 17551882 17551923 3'utr CycT FlyBase G37630.1 GATCGCCTGGAACGTTGACGTAGCTTTCATTTGTTTTAATTT 13 17551903 0.782869023 7 12 113 0.923076923 1.079181246 0.461538462 0 0 13 1 0 12 3L:17551882-17551923 7 CycT FBtr0333125|FBtr0333124 17551002|17551002 17552803|17552803 TAGCTTT 7mer-m8 dme-miR-79-3p 3L - 17551882 17551933 3'utr CycT FlyBase G28426.1 TATGTTTCAAGATCGCCTGGAACGTTGACGTAGCTTTCATTTGTTTTAATTT 13 17551893 0.975113041 6 13 113 1 1.322219295 0.333333333 0.461538462 0.666666667 13 0 0 21 3L:17551882-17551933 7 11.5 1271 FBgn0025455 628.69 14.30666667 21.88666667 0.018292004 0.803821062 0.525434054 0 -10 -5 0.25 dme-miR-92b-3p 7mer-m8 GTGCAAT 3L 17560428 17560434 - 3L_17560428_17560434_- 0.654102749 0.658925657 0.656514203 0.003410376 Eip74EF FBtr0075203|FBtr0075204|FBtr0100411|FBtr0075202|FBtr0305796 17560156|17560156|17558670|17560156|17560156 17561769|17561769|17561769|17561769|17561769 3L - 17560408 17560458 3'utr Eip74EF FlyBase G37660.1 CAATTTCCAAACACTGCCCAAAACGTGCAATCTCTTGAAAGGATACCTTGA 11 17560433 0.887387584 5 10 53 0.916666667 1.041392685 0.083333333 0.090909091 0.166666667 11 1 0 11 3L:17560408-17560458 7 Eip74EF FBtr0075203|FBtr0305796|FBtr0075202|FBtr0100411|FBtr0075204 17560156|17560156|17560156|17558670|17560156 17561769|17561769|17561769|17561769|17561769 GTGCAAT 7mer-m8 dme-miR-92b-3p 3L - 17560401 17560444 3'utr Eip74EF FlyBase G28448.1 TGCCCAAAACGTGCAATCTCTTGAAAGGATACCTTGAATAGGAA 6 17560433 0.96192971 3 6 34 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 3L:17560401-17560444 7 7 1272 FBgn0000567 175.3133333 4.123333333 6.33 0.039928509 1.697655618 1.105845182 -1 -1 -1 0.25 dme-miR-33-5p 8mer-A1 CAATGCAA 3L 17560479 17560486 - 3L_17560479_17560486_- 0.465133415 0.432068524 0.448600969 0.023380415 Eip74EF FBtr0075203|FBtr0075204|FBtr0100411|FBtr0075202|FBtr0305796 17560156|17560156|17558670|17560156|17560156 17561769|17561769|17561769|17561769|17561769 3L - 17560467 17560498 3'utr Eip74EF FlyBase G37661.1 AACCGCAATCCTCAATGCAATATACCGACAAC 5 17560478 0.794724932 2 3 14 0.714285714 0.698970004 0 0.4 0.571428571 5 2 0 5 3L:17560467-17560498 8 Eip74EF FBtr0075203|FBtr0305796|FBtr0075202|FBtr0100411|FBtr0075204 17560156|17560156|17560156|17558670|17560156 17561769|17561769|17561769|17561769|17561769 CAATGCAA 8mer-A1 dme-miR-33-5p 3L - 17560465 17560502 3'utr Eip74EF FlyBase G28449.1 CTGCAACCGCAATCCTCAATGCAATATACCGACAACTT 7 17560484 0.968354673 3 4 27 0.8 0.602059991 0.1 0.285714286 0.5 7 1 1 8 3L:17560465-17560502 8 5.5 1273 FBgn0000567 175.3133333 4.123333333 6.33 0.0313724 1.333872272 0.868878357 -8 -2 -5 0.25 dme-bantam-3p 6mer3-8 TGATCT 3L 17561167 17561172 - 3L_17561167_17561172_- 0.685083395 0.656923986 0.671003691 0.019911703 Eip74EF FBtr0075203|FBtr0075204|FBtr0100411|FBtr0075202|FBtr0305796 17560156|17560156|17558670|17560156|17560156 17561769|17561769|17561769|17561769|17561769 3L - 17561154 17561193 3'utr Eip74EF FlyBase G37664.1 CAAGAATTTCTCTATCTCTATTGATCTAATGCTAAATCTA 17 17561173 0.699280383 5 16 160 0.954545455 1.322219295 0.136363636 0.235294118 0.409090909 17 1 0 21 3L:17561154-17561193 6 Eip74EF FBtr0075203|FBtr0305796|FBtr0075202|FBtr0100411|FBtr0075204 17560156|17560156|17560156|17558670|17560156 17561769|17561769|17561769|17561769|17561769 TGATCT 6mer3-8 dme-bantam-3p 3L - 17561157 17561192 3'utr Eip74EF FlyBase G28451.1 AAGAATTTCTCTATCTCTATTGATCTAATGCTAAAT 7 17561173 0.721636197 4 7 74 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3L:17561157-17561192 6 12 1274 FBgn0000567 175.3133333 4.123333333 6.33 0.068448872 2.910266774 1.895734597 1 1 1 0.25 dme-miR-283-5p 7mer-m8 TGATATT 3L 17561240 17561246 - 3L_17561240_17561246_- 0.442171795 0.550649881 0.496410838 0.0767056 Eip74EF FBtr0075203|FBtr0075204|FBtr0100411|FBtr0075202|FBtr0305796 17560156|17560156|17558670|17560156|17560156 17561769|17561769|17561769|17561769|17561769 3L - 17561205 17561278 3'utr Eip74EF FlyBase G37665.1 AGAGGACGAAGGACGACCGAATTGATTCATATTGATATTCGATAGATGTGTGTAATATGTAAATGAGTACGAAC 12 17561257 0.983680556 5 9 68 0.714285714 1 0.285714286 0.083333333 0.214285714 12 4 0 10 3L:17561205-17561278 7 Eip74EF FBtr0075203|FBtr0305796|FBtr0075202|FBtr0100411|FBtr0075204 17560156|17560156|17560156|17558670|17560156 17561769|17561769|17561769|17561769|17561769 TGATATT 7mer-m8 dme-miR-283-5p 3L - 17561225 17561271 3'utr Eip74EF FlyBase G28452.1 GAAGGACGACCGAATTGATTCATATTGATATTCGATAGATGTGTGTA 7 17561247 0.985221532 4 7 58 1 1.041392685 0.363636364 0.428571429 0.636363636 7 0 0 11 3L:17561225-17561271 7 6.5 1275 FBgn0000567 175.3133333 4.123333333 6.33 0.037076473 1.576394503 1.02685624 11 1 6 0.25 dme-bantam-3p 6mer3-8 TGATCT 3L 17561432 17561437 - 3L_17561432_17561437_- 0.804208269 0.78912611 0.79666719 0.010664726 Eip74EF FBtr0075203|FBtr0075204|FBtr0100411|FBtr0075202|FBtr0305796 17560156|17560156|17558670|17560156|17560156 17561769|17561769|17561769|17561769|17561769 3L - 17561347 17561491 3'utr Eip74EF FlyBase G37666.1 ACACCCTGTGTCCTGTACCCTATACATACACCCAGCTAAATCGACGGTAAATAATGATCTATTCATGGGCGTTAGTGTTGTACTTGTAACTGTAGATTTAACTGTAAACTGTAACTGTAATGAATATTGTTATTATTGGTTATTA 87 17561437 0.986486788 14 81 695 0.919191919 1.959041392 0.070707071 0.137931034 0.242424242 87 8 0 91 3L:17561347-17561491 6 Eip74EF FBtr0075203|FBtr0305796|FBtr0075202|FBtr0100411|FBtr0075204 17560156|17560156|17560156|17558670|17560156 17561769|17561769|17561769|17561769|17561769 TGATCT 6mer3-8 dme-bantam-3p 3L - 17561377 17561491 3'utr Eip74EF FlyBase G28453.1 ACACCCTGTGTCCTGTACCCTATACATACACCCAGCTAAATCGACGGTAAATAATGATCTATTCATGGGCGTTAGTGTTGTACTTGTAACTGTAGATTTAACTGTAAACTGTAAC 47 17561437 0.770845622 14 46 360 0.955882353 1.812913357 0.191176471 0.340425532 0.544117647 47 3 0 65 3L:17561377-17561491 6 45.5 1276 FBgn0000567 175.3133333 4.123333333 6.33 0.259535308 11.03476152 7.187993681 0 0 0 0.25 dme-miR-1008-3p 8mer-A1 AGCTGTGA 3L 1759130 1759137 + 3L_1759130_1759137_+ 0.61629079 0.620145913 0.618218351 0.002725967 CG8001 FBtr0334073|FBtr0300292|FBtr0334074|FBtr0072774 1759035|1759035|1759035|1759035 1759208|1759208|1759208|1759208 3L + 1759111 1759156 3'utr CG8001 FlyBase G27208.1 TGTTAGAAAGCGTTTCTGAAGCTGTGAATTTGTAACCGTAACACAT 72 1759126 0.678658016 8 68 594 0.952941176 1.607455023 0.235294118 0.138888889 0.270588235 72 3 1 81 3L:1759111-1759156 8 CG8001 FBtr0334074|FBtr0072774|FBtr0334073|FBtr0300292 1759035|1759035|1759035|1759035 1759208|1759208|1759208|1759208 AGCTGTGA 8mer-A1 dme-miR-1008-3p 3L + 1759106 1759156 3'utr CG8001 FlyBase G20596.1 AACTATGTTAGAAAGCGTTTCTGAAGCTGTGAATTTGTAACCGTAACACAT 55 1759127 0.71612987 8 52 453 0.941176471 1.425968732 0.458823529 0.454545455 0.647058824 55 3 2 80 3L:1759106-1759156 8 63 1277 FBgn0035268 473.3333333 22.80666667 34.95333333 0.133098592 2.76235019 1.802403204 4 3 3.5 0.25 dme-miR-308-3p 8mer-m1 CTGTGATT 3L 17630070 17630077 + 3L_17630070_17630077_+ 0.382004797 0.381428658 0.381716728 0.000407364 CG7510 FBtr0333121|FBtr0075182 17629985|17629985 17630971|17630480 3L + 17630028 17630124 3'utr CG7510 FlyBase G31157.1 CTTGATTTCCTGTTTAGTTTATTTTGAATGTAATTTTGACTGCTGTGATTGTACGCCAAACAAGAACGCACACACAATGCAGTCAGTTGTGTGTGGG 151 17630077 0.756423141 12 144 1193 0.954545455 2.225309282 0.068181818 0.125827815 0.25 151 8 0 168 3L:17630028-17630124 8 CG7510 FBtr0333121|FBtr0075182 17629985|17629985 17630971|17630480 CTGTGATT 8mer-m1 dme-miR-308-3p 3L + 17630046 17630124 3'utr CG7510 FlyBase G23571.1 TTATTTTGAATGTAATTTTGACTGCTGTGATTGTACGCCAAACAAGAACGCACACACAATGCAGTCAGTTGTGTGTGGG 111 17630077 0.79662595 11 104 864 0.977142857 2.23299611 0.165714286 0.405405405 0.622857143 111 4 0 171 3L:17630046-17630124 8 120 1278 FBgn0036741 369.9166667 11.27333333 17.24666667 0.324397387 10.644589 6.957866254 -7 -7 -7 0.25 dme-bantam-3p 7mer-m8 TGATCTC 3L 17639205 17639211 - 3L_17639205_17639211_- 0.636432993 0.644943769 0.640688381 0.006018044 Pep FBtr0075198 17638116 17640026 3L - 17639025 17639256 3'utr Pep FlyBase G37680.1 CCCGCCTACCTAAGTACAACTGGCAGCGTGCTGTCGGTCCCGGTCTGATCTCCAAGCTGGAGTGCTATGAGTGCTCGGTGTGCAGCAAGTTCTTCGACACCGAGGTGACCGCCGAGATTCACTCCCGTACGGCGACTCATCACCGCAACTTCTTGAAGTTTATCAACGAGAAATCAAGCGATACCAAGATCGCACAGAAGCGCGCAGCTGCCGCCCTGGAGGAGAATGAGCG 89 17639211 0.973825908 22 76 470 0.884615385 1.264817823 0.201923077 0.146067416 0.269230769 89 8 4 92 3L:17639025-17639256 7 Pep FBtr0075198 17638116 17640026 TGATCTC 7mer-m8 dme-bantam-3p 3L - 17639168 17639258 3'utr Pep FlyBase G28467.1 TACCCGCCTACCTAAGTACAACTGGCAGCGTGCTGTCGGTCCCGGTCTGATCTCCAAGCTGGAGTGCTATGAGTGCTCGGTGTGCAGCAAG 19 17639212 0.889050501 8 17 109 0.935483871 1.462397998 0.225806452 0.421052632 0.64516129 19 2 0 29 3L:17639168-17639258 7 20 1279 FBgn0004401 3496.79 156.06 239.5966667 0.005719531 0.128155837 0.083473615 0 1 0.5 0.25 dme-miR-12-5p 7mer-A1 ATACTCA 3L 17639646 17639652 - 3L_17639646_17639652_- 0.753034955 0.774983889 0.764009422 0.015520216 Pep FBtr0075198 17638116 17640026 3L - 17639585 17639902 3'utr Pep FlyBase G37683.1 CGCCTCAAGGCCAACATGATCCGTCAGGAGGCTAAGATCGCAGAGCAGCTCAAGTCGATCGAGTTTGACCGCTTGAAGCGCATGGGCAAAAGCAAGCAGCGTCAGCTGGACTACTGCACCATGTGCGACCTGAACTTCCATGGTCACATCTCGACCCATCGCAAGTCGGAGGGACATTTGCAGCTGAAGAAGTTCTTGCACCCCAAGTGCATTGAGTGCAACAAGGAGTTCGCCACTCGCATTGACTACGATACTCATCTGCTGTCCGCCGAGCATCTGAAGAAGGCTGCCGAGAACAACACCAAGGTGGGTGAGCGC 144 17639645 0.970719689 35 132 758 0.915151515 1.480006943 0.151515152 0.125 0.236363636 144 10 4 151 3L:17639585-17639902 7 Pep FBtr0075198 17638116 17640026 ATACTCA 7mer-A1 dme-miR-12-5p 3L - 17639585 17639675 3'utr Pep FlyBase G28470.1 GTTCGCCACTCGCATTGACTACGATACTCATCTGCTGTCCGCCGAGCATCTGAAGAAGGCTGCCGAGAACAACACCAAGGTGGGTGAGCGC 29 17639645 0.978988996 7 27 177 0.857142857 0.77815125 0.333333333 0.310344828 0.523809524 29 1 5 36 3L:17639585-17639675 7 39.5 1280 FBgn0004401 3496.79 156.06 239.5966667 0.011296074 0.253107779 0.16486039 -7 -7 -7 0.25 dme-miR-980-3p 6mer2-7 GCAGCT 3L 17639718 17639723 - 3L_17639718_17639723_- 0.936478197 0.964893516 0.950685856 0.020092651 Pep FBtr0075198 17638116 17640026 3L - 17639585 17639902 3'utr Pep FlyBase G37683.1 CGCCTCAAGGCCAACATGATCCGTCAGGAGGCTAAGATCGCAGAGCAGCTCAAGTCGATCGAGTTTGACCGCTTGAAGCGCATGGGCAAAAGCAAGCAGCGTCAGCTGGACTACTGCACCATGTGCGACCTGAACTTCCATGGTCACATCTCGACCCATCGCAAGTCGGAGGGACATTTGCAGCTGAAGAAGTTCTTGCACCCCAAGTGCATTGAGTGCAACAAGGAGTTCGCCACTCGCATTGACTACGATACTCATCTGCTGTCCGCCGAGCATCTGAAGAAGGCTGCCGAGAACAACACCAAGGTGGGTGAGCGC 144 17639725 0.970719689 35 132 758 0.915151515 1.480006943 0.151515152 0.125 0.236363636 144 10 4 151 3L:17639585-17639902 6 Pep FBtr0075198 17638116 17640026 GCAGCT 6mer2-7 dme-miR-980-3p 3L - 17639680 17639809 3'utr Pep FlyBase G28471.1 AAGCAGCGTCAGCTGGACTACTGCACCATGTGCGACCTGAACTTCCATGGTCACATCTCGACCCATCGCAAGTCGGAGGGACATTTGCAGCTGAAGAAGTTCTTGCACCCCAAGTGCATTGAGTGCAACA 27 17639725 0.9583296 12 26 125 0.976744186 1.62324929 0.069767442 0.407407407 0.627906977 27 1 0 42 3L:17639680-17639809 6 23 1281 FBgn0004401 3496.79 156.06 239.5966667 0.006577461 0.147379213 0.095994658 2 2 2 0.25 dme-miR-305-3p 8mer-m1 ATGTGCCG 3L 17661159 17661166 - 3L_17661159_17661166_- 0.545516344 0.536996103 0.541256224 0.006024691 Crtc FBtr0345384|FBtr0330162 17659816|17659816 17662225|17661949 3L - 17661134 17661191 3'utr Crtc FlyBase G37712.1 ACACCCAACCCATATTATAATCCCAATGTGCCGTGGAAGCAATTACTAGAGTTTAAGA 29 17661163 0.940467417 5 29 122 1 1.51851394 0 0.137931034 0.242424242 29 0 0 33 3L:17661134-17661191 8 Crtc FBtr0345384|FBtr0330162 17659816|17659816 17662225|17661949 ATGTGCCG 8mer-m1 dme-miR-305-3p 3L - 17661132 17661178 3'utr Crtc FlyBase G28492.1 ATTATAATCCCAATGTGCCGTGGAAGCAATTACTAGAGTTTAAGATG 21 17661163 0.775153561 4 20 94 0.933333333 1.447158031 0.166666667 0.333333333 0.533333333 21 2 0 28 3L:17661132-17661178 8 24 1282 FBgn0036746 1464.6 32.19333333 49.71333333 0.016386727 0.745495962 0.482767869 -3 -3 -3 0.25 dme-miR-1008-3p 6mer3-8 AGCTGT 3L 1772287 1772292 - 3L_1772287_1772292_- 0.732791671 0.706455187 0.719623429 0.018622718 CG13933 FBtr0332881|FBtr0072792 1771807|1771807 1772601|1772601 3L - 1772278 1772343 3'utr CG13933 FlyBase G33477.1 AGATCGCTAAATTCTCTTAATTTAGGGCCAAAGGAGATACGCTTGATCTGAAGCTGTTGCGTATGA 51 1772286 0.795702591 9 48 323 0.919354839 1.153814864 0.483870968 0.117647059 0.274193548 51 2 3 57 3L:1772278-1772343 6 CG13933 FBtr0072792|FBtr0332881 1771807|1771807 1772601|1772601 AGCTGT 6mer3-8 dme-miR-1008-3p 3L - 1772272 1772344 3'utr CG13933 FlyBase G25324.1 TAGATCGCTAAATTCTCTTAATTTAGGGCCAAAGGAGATACGCTTGATCTGAAGCTGTTGCGTATGAGATATG 27 1772286 0.93916862 8 27 174 1 1.681241237 0.375 0.444444444 0.6875 27 0 0 48 3L:1772272-1772344 6 25.5 1283 FBgn0035270 373.6633333 14.21333333 21.71 0.068243249 1.794090056 1.174573929 -6 -6 -6 0.25 dme-miR-283-5p 6mer3-8 TGATAT 3L 1772388 1772393 - 3L_1772388_1772393_- 0.857171271 0.593199077 0.725185174 0.186656533 CG13933 FBtr0332881|FBtr0072792 1771807|1771807 1772601|1772601 3L - 1772367 1772430 3'utr CG13933 FlyBase G33478.1 AGCTTAACGATCAGTTCTGAAATGACTGAATTTACTTTGATATCGAAAGCGAATAGTTATGTAT 18 1772394 0.981100677 7 18 132 1 1.322219295 0.142857143 0.166666667 0.285714286 18 0 0 21 3L:1772367-1772430 6 CG13933 FBtr0072792|FBtr0332881 1771807|1771807 1772601|1772601 TGATAT 6mer3-8 dme-miR-283-5p 3L - 1772367 1772430 3'utr CG13933 FlyBase G25325.1 AGCTTAACGATCAGTTCTGAAATGACTGAATTTACTTTGATATCGAAAGCGAATAGTTATGTAT 10 1772410 0.980309726 4 10 72 1 1.146128036 0.142857143 0.4 0.571428571 10 0 0 14 3L:1772367-1772430 6 5.5 1284 FBgn0035270 373.6633333 14.21333333 21.71 0.014719132 0.3869606 0.253339475 1 17 9 0.25 dme-miR-277-3p 7mer-m8 TGCATTT 3L 17797846 17797852 - 3L_17797846_17797852_- 0.442018428 0.475391524 0.458704976 0.023598345 NUCB1 FBtr0075171 17797736 17798085 3L - 17797762 17797871 3'utr NUCB1 FlyBase G37734.1 TTCGCTTTTCCAGTAGCTCTGCATTTGCGTGATGTATTTCTCTAACGAATTTTGTGTACATATGAGTTTATACCTGAACATCAAAAACAAAATAAATGAAATGAAACGAA 85 17797846 0.989664956 15 81 792 0.949494949 1.496006599 0.212121212 0.152941176 0.272727273 85 3 2 94 3L:17797762-17797871 7 NUCB1 FBtr0075171 17797736 17798085 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 17797825 17797869 3'utr NUCB1 FlyBase G28508.2 CGCTTTTCCAGTAGCTCTGCATTTGCGTGATGTATTTCTCTAACG 58 17797847 0.780720965 6 56 568 0.967391304 1.949390007 0.173913043 0.396551724 0.619565217 58 3 0 89 3L:17797825-17797869 7 58.5 1285 FBgn0052190 2200.613333 121.53 186.3466667 0.026583498 0.481362627 0.313931025 -6 -5 -5.5 0.25 dme-miR-980-5p 6mer3-8 GAAAAA 3L 17849217 17849222 + 3L_17849217_17849222_+ 0.987834286 0.985078801 0.986456543 0.001948433 CG7430 FBtr0331810|FBtr0075140 17849144|17849144 17849372|17849601 3L + 17849195 17849248 3'utr CG7430 FlyBase G31171.1 AATCTTTGAATAACCCCTATTCGAAAAATTATCCTGACGGCCGAAACGACAGTC 10 17849223 0.967646001 5 10 57 1 1.079181246 0.5 0.1 0.25 10 0 0 12 3L:17849195-17849248 6 CG7430 FBtr0331810|FBtr0075140 17849144|17849144 17849372|17849601 GAAAAA 6mer3-8 dme-miR-980-5p 3L + 17849178 17849236 3'utr CG7430 FlyBase G23583.1 TTTTGCACCGCGTTTGAAATCTTTGAATAACCCCTATTCGAAAAATTATCCTGACGGCC 6 17849223 0.969770925 5 6 39 1 1 0.2 0.5 0.7 6 0 0 10 3L:17849178-17849236 6 6.5 1286 FBgn0036762 1043.3 65.57333333 100.5333333 0.006230231 0.099125661 0.064655172 -6 -6 -6 0.25 dme-miR-92b-3p 8mer-m1 GTGCAATT 3L 17898975 17898982 - 3L_17898975_17898982_- 0.593779476 0.472540709 0.533160092 0.085728778 Prestin FBtr0075153 17898887 17899268 3L - 17898954 17899001 3'utr Prestin FlyBase G37765.1 AATGAAGTGCATTGATTTAGTGCAATTTGTACCAAAATGAACAATTCA 10 17898973 0.759709753 4 9 57 1 1.041392685 0.272727273 0.1 0.181818182 10 0 0 11 3L:17898954-17899001 8 Prestin FBtr0075153 17898887 17899268 GTGCAATT 8mer-m1 dme-miR-92b-3p 3L - 17898948 17898983 3'utr Prestin FlyBase G28535.1 AGTGCAATTTGTACCAAAATGAACAATTCAAACACA 6 17898974 0.948992985 3 6 28 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 3L:17898948-17898983 8 7 1287 FBgn0036770 2001.45 68.62666667 105.7333333 0.003497464 0.102001166 0.066204288 -9 -8 -8.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 17899204 17899210 - 3L_17899204_17899210_- 0.776966874 0.745735058 0.761350966 0.022084218 Prestin FBtr0075153|FBtr0075153|FBtr0075153 17898887|17898887|17898887 17899268|17899268|17899268 3L - 17899086 17899341 stop_codon Prestin FlyBase G37766.1 CGAAGGACCTTTTGAGATCTTCCCCACCCTGCACGATTGTGTGGAATATGCCAATGCCTGTCGAACAGCGTGAGAGGGTGTTCCTGCTCCAGACACCCCAGTTAACTGGGGCAGAGAGCCAAACCACGTTTTGTGATATGTCCAAGTGATAGCTTGTGAATCGTAGCATCAAAACCCCTTCCTAGTTGCTAAAATCTATTTTAAACTGAATAGAAACAATGTCGCCGTCTACAATCAAGCAGAATAGGCTAAGTTT 99 17899212 0.982029089 25 88 655 0.905172414 1.419129308 0.129310345 0.131313131 0.25862069 99 8 3 105 3L:17899086-17899341 7 Prestin FBtr0075153|FBtr0075153|FBtr0075153 17898887|17898887|17898887 17899268|17899268|17899268 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 17899085 17899239 3'utr Prestin FlyBase G28536.1 TAACTGGGGCAGAGAGCCAAACCACGTTTTGTGATATGTCCAAGTGATAGCTTGTGAATCGTAGCATCAAAACCCCTTCCTAGTTGCTAAAATCTATTTTAAACTGAATAGAAACAATGTCGCCGTCTACAATCAAGCAGAATAGGCTAAGTTTG 79 17899211 0.983440977 12 71 556 0.92 1.458637849 0.288 0.430379747 0.64 79 7 3 115 3L:17899085-17899239 7 67.5 1288 FBgn0036770 2001.45 68.62666667 105.7333333 0.033725549 0.98358267 0.638398487 2 1 1.5 0.25 dme-miR-283-5p 7mer-m8 TGATATT 3L 17909484 17909490 + 3L_17909484_17909490_+ 0.381959546 0.53160529 0.456782418 0.10581556 CG14353 FBtr0075144 17909436 17909683 3L + 17909463 17909502 3'utr CG14353 FlyBase G31193.1 TAAAGAAATGCTTCATACTTGTGATATTGGATGATGGGTT 58 17909481 0.699701346 8 55 529 0.96 1.556302501 0.653333333 0.172413793 0.36 58 2 1 72 3L:17909463-17909502 7 CG14353 FBtr0075144 17909436 17909683 TGATATT 7mer-m8 dme-miR-283-5p 3L + 17909466 17909505 3'utr CG14353 FlyBase G23600.1 AGAAATGCTTCATACTTGTGATATTGGATGATGGGTTAAT 47 17909481 0.62775468 9 39 439 0.838235294 0.801632346 0.602941176 0.29787234 0.514705882 47 3 8 57 3L:17909466-17909505 7 52.5 1289 FBgn0036771 185.44 15.31 23.46333333 0.28311044 3.429131287 2.237533741 3 3 3 0.25 dme-miR-92b-3p 7mer-m1 TGCAATT 3L 17953464 17953470 - 3L_17953464_17953470_- 0.694708607 0.513092715 0.603900661 0.128421834 Eip75B FBtr0306814|FBtr0306813|FBtr0075148|FBtr0075151|FBtr0075150|FBtr0347013|FBtr0075149 17950951|17953356|17953356|17953356|17952160|17953356|17952160 17953640|17953640|17953640|17953640|17953640|17953640|17953640 3L - 17953457 17953486 3'utr Eip75B FlyBase G37800.1 GCAAAACCAACATGCATGCAATTTAAAACT 10 17953473 0.894101181 2 8 33 0.833333333 1 0.166666667 0.2 0.333333333 10 2 0 10 3L:17953457-17953486 7 Eip75B FBtr0075149|FBtr0075150|FBtr0347013|FBtr0075148|FBtr0075151|FBtr0306814|FBtr0306813 17952160|17952160|17953356|17953356|17953356|17950951|17953356 17953640|17953640|17953640|17953640|17953640|17953640|17953640 TGCAATT 7mer-m1 dme-miR-92b-3p 3L - 17953446 17953510 3'utr Eip75B FlyBase G28560.1 TTGAGACGTGTACAAAGTTTGAAAGCAAAACCAACATGCATGCAATTTAAAACTAATATTTAAAG 10 17953474 0.928639991 5 9 55 0.916666667 1.041392685 0 0.2 0.333333333 10 1 0 11 3L:17953446-17953510 7 7 1290 FBgn0000568 1336.92 32.88666667 50.30333333 0.005235915 0.21285222 0.139155788 3 4 3.5 0.25 dme-bantam-3p 8mer-A1 TGATCTCA 3L 18168772 18168779 - 3L_18168772_18168779_- 0.604539628 0.553562886 0.579051257 0.03604597 hid FBtr0075133 18167743 18170010 3L - 18168761 18168804 3'utr hid FlyBase G37832.1 AAAAACCAATTCCCAAAAATCGCATTGATCTCATGGATTTATAC 30 18168780 0.742862364 5 30 214 1 1.579783597 0.026315789 0.233333333 0.394736842 30 0 0 38 3L:18168761-18168804 8 hid FBtr0075133 18167743 18170010 TGATCTCA 8mer-A1 dme-bantam-3p 3L - 18168761 18168796 3'utr hid FlyBase G28591.1 ATTCCCAAAAATCGCATTGATCTCATGGATTTATAC 20 18168780 0.776140948 2 20 136 1 1.51851394 0 0.3 0.575757576 20 0 0 33 3L:18168761-18168796 8 25 1291 FBgn0003997 37.33333333 1.456666667 2.223333333 0.669642857 17.1624714 11.24437781 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 18397836 18397842 - 3L_18397836_18397842_- 0.416753175 0.439799687 0.428276431 0.016296336 rpr FBtr0075120|FBtr0075120|FBtr0075120 18397533|18397533|18397533 18398037|18398037|18398037 3L - 18397793 18397941 3'utr rpr FlyBase G37840.1 ACAGTCACCACTCATCAGCCGACGGCACTCGATTTCTACTGCAGTCAAGGACACAGAGCCACAACACCCACCCAATTTTAGTTTACTCATCAAAGCGATTGTGATAATGGTTTTGTTTCTACAAAAAAGCGGAGGAAAAATTTGAAAAA 3183 18397843 0.973742105 27 3002 26899 0.9450883 1.742268886 0.061810155 0.121269243 0.228200883 3183 138 61 3425 3L:18397793-18397941 7 rpr FBtr0075120|FBtr0075120|FBtr0075120 18397533|18397533|18397533 18398037|18398037|18398037 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 18397795 18397940 3'utr rpr FlyBase G28597.1 CAGTCACCACTCATCAGCCGACGGCACTCGATTTCTACTGCAGTCAAGGACACAGAGCCACAACACCCACCCAATTTTAGTTTACTCATCAAAGCGATTGTGATAATGGTTTTGTTTCTACAAAAAAGCGGAGGAAAAATTTGAAA 2243 18397843 0.98718596 30 2117 18575 0.944877345 1.891829385 0.062626263 0.380294249 0.598845599 2243 150 41 3274 3L:18397795-18397940 7 2669.5 1292 FBgn0011706 109.3166667 15.44666667 23.89666667 24.41988108 172.8204575 111.7101409 1 1 1 0.25 dme-miR-252-5p 7mer-m8 GTACTTA 3L 1851142 1851148 - 3L_1851142_1851148_- 0.587625246 0.587996228 0.587810737 0.000262337 CNMa FBtr0332672|FBtr0303155 1850913|1850913 1851347|1851347 3L - 1851041 1851159 3'utr CNMa FlyBase G33542.1 ACGATTACATTGTACTTATACATAATGTCTCGACTTACACACACTGACACACATCTGATACCCGCTCTCTGCACACCGACATTCACACACACGCACACACCGAAGTATTTCCATATTAG 28 1851149 0.872215485 9 26 176 0.939393939 1.491361694 0.333333333 0.178571429 0.303030303 28 2 0 31 3L:1851041-1851159 7 CNMa FBtr0332672|FBtr0303155 1850913|1850913 1851347|1851347 GTACTTA 7mer-m8 dme-miR-252-5p 3L - 1851082 1851157 3'utr CNMa FlyBase G25365.1 GATTACATTGTACTTATACATAATGTCTCGACTTACACACACTGACACACATCTGATACCCGCTCTCTGCACACCG 15 1851149 0.777190814 7 14 84 0.958333333 1.361727836 0.333333333 0.4 0.625 15 1 0 23 3L:1851082-1851157 7 7 1293 FBgn0035282 2.666666667 0.21 0.333333333 2.625 33.33333333 21 1 1 1 0.25 dme-miR-317-5p 7mer-A1 TATCCCA 3L 1858304 1858310 + 3L_1858304_1858310_+ 0.813254256 0.823178678 0.818216467 0.007017611 CG12024 FBtr0072833|FBtr0303152|FBtr0072832 1858183|1858183|1858183 1859047|1859047|1859047 3L + 1858187 1858359 3'utr CG12024 FlyBase G27237.1 CGGATCGTTTTGTTATCTAATCTCAACGGCCATAACGTGACGATCACGTGCGCTAGTAATCTCCCCAGTTCCCCAGTCCAAAGTAATCTCCGGGCAAGAACGAAATCTGAAATCTCCTATCCCAATCTCGACACAAAGATGCGATGGTATTACCCTAGTTTTAACCTTAAGTG 74 1858293 0.840945916 19 68 381 0.925925926 1.875061263 0.135802469 0.094594595 0.172839506 74 6 0 75 3L:1858187-1858359 7 CG12024 FBtr0072832|FBtr0303152|FBtr0072833 1858183|1858183|1858183 1859047|1859047|1859047 TATCCCA 7mer-A1 dme-miR-317-5p 3L + 1858246 1858353 3'utr CG12024 FlyBase G20616.1 TCTCCCCAGTTCCCCAGTCCAAAGTAATCTCCGGGCAAGAACGAAATCTGAAATCTCCTATCCCAATCTCGACACAAAGATGCGATGGTATTACCCTAGTTTTAACCT 37 1858294 0.970700306 8 30 178 0.849056604 1.176091259 0.20754717 0.351351351 0.547169811 37 6 2 45 3L:1858246-1858353 7 23 1294 FBgn0035283 210.8633333 14.46 22.18 0.109075388 1.590594744 1.036970243 11 10 10.5 0.25 dme-bantam-3p 8mer-A1 TGATCTCA 3L 1859248 1859255 - 3L_1859248_1859255_- 0.630109281 0.630628429 0.630368855 0.000367059 R FBtr0332671|FBtr0303154|FBtr0072867 1859113|1859113|1859113 1860656|1860656|1860656 3L - 1859212 1859266 3'utr R FlyBase G33545.1 CACAGAGCCTCTGATCTCAGAATCCTGGCAGTCCCGAATTCGCGACGCAGTAGGT 76 1859256 0.708962651 6 70 276 0.867924528 1.361727836 0.08490566 0.263157895 0.471698113 76 11 3 92 3L:1859212-1859266 8 R FBtr0332671|FBtr0072867|FBtr0303154 1859113|1859113|1859113 1860656|1860656|1860656 TGATCTCA 8mer-A1 dme-bantam-3p 3L - 1859212 1859267 3'utr R FlyBase G25367.1 ACACAGAGCCTCTGATCTCAGAATCCTGGCAGTCCCGAATTCGCGACGCAGTAGGT 55 1859255 0.727588916 5 47 201 0.875 1.243038049 0.05 0.309090909 0.525 55 7 3 70 3L:1859212-1859267 8 47 1295 FBgn0004636 4610.196667 206.99 319.1866667 0.010194793 0.227064109 0.147249259 1 0 0.5 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 3L 1867575 1867580 + 3L_1867575_1867580_+ 0.999971804 0.999983356 0.99997758 8.20E-06 CG12025 FBtr0345381|FBtr0072834|FBtr0332668 1867491|1867491|1867491 1869491|1867863|1868644 3L + 1867491 1867609 stop_codon CG12025 FlyBase G27247.1 AAGCGTAAGCGGACATCTGGACAGTCGAGCTGGTTGATCCATGGACGAAGAGAGTGGGAGAAGCCCCATCTATAAATATAAATCTGTGTTTGTTTATACCCGACCCGTATAAACAACTT 34 1867573 0.989900228 8 29 283 0.88372093 1.579783597 0.186046512 0.205882353 0.372093023 34 5 0 38 3L:1867491-1867609 6 CG12025 FBtr0332668|FBtr0072834|FBtr0345381 1867491|1867491|1867491 1868644|1867863|1869491 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 1867562 1867590 3'utr CG12025 FlyBase G20624.1 ATAAATATAAATCTGTGTTTGTTTATACC 11 1867574 0.746220819 3 6 102 0.611111111 0.740362689 0 0.545454545 0.722222222 11 6 1 11 3L:1867562-1867590 6 15.5 1296 FBgn0035285 812.7766667 48.59666667 74.35333333 0.019070429 0.318951917 0.20846409 2 1 1.5 0.25 dme-miR-307a-3p 6mer3-8 GGTTGT 3L 1868455 1868460 + 3L_1868455_1868460_+ 0.543656527 0.513952396 0.528804461 0.021003971 CG12025 FBtr0345381|FBtr0332668 1867491|1867491 1869491|1868644 3L + 1868421 1868471 3'utr CG12025 FlyBase G27251.1 GTATAATTTCATTTTAAGAATGAATGCTGAATATGGTTGTATTAAAACGAA 17 1868455 0.98784666 5 15 135 0.923076923 1.079181246 0.076923077 0.411764706 0.615384615 17 1 1 24 3L:1868421-1868471 6 CG12025 FBtr0332668|FBtr0345381 1867491|1867491 1868644|1869491 GGTTGT 6mer3-8 dme-miR-307a-3p 3L + 1868399 1868471 3'utr CG12025 FlyBase G20627.1 CAGCCGCTTAGTTGTTAATGTCGTATAATTTCATTTTAAGAATGAATGCTGAATATGGTTGTATTAAAACGAA 16 1868454 0.984657832 7 16 128 1 1.414973348 0.038461538 0.4375 0.653846154 16 0 0 26 3L:1868399-1868471 6 14 1297 FBgn0035285 812.7766667 48.59666667 74.35333333 0.017224904 0.288085603 0.188290146 0 1 0.5 0.25 dme-miR-317-3p 7mer-A1 GTGTTCA 3L 18752045 18752051 - 3L_18752045_18752051_- 0.822034219 0.823257062 0.822645641 0.000864721 ftz-f1 FBtr0304627|FBtr0347045|FBtr0075086|FBtr0075087 18750605|18750605|18751747|18751747 18752745|18752745|18752745|18752745 3L - 18752021 18752092 3'utr ftz-f1 FlyBase G37897.2 GGAAAATCCATACAAAGAAAATGAAAACAAAGCAAATTTAGGTGTTCATGGTATGAATGTATGTGTATATTA 21 18752044 0.982275511 7 19 157 0.956521739 1.342422681 0.130434783 0.095238095 0.173913043 21 1 0 22 3L:18752021-18752092 7 ftz-f1 FBtr0075086|FBtr0075087|FBtr0304627|FBtr0347045 18751747|18751747|18750605|18750605 18752745|18752745|18752745|18752745 GTGTTCA 7mer-A1 dme-miR-317-3p 3L - 18752034 18752067 3'utr ftz-f1 FlyBase G28634.1 AACAAAGCAAATTTAGGTGTTCATGGTATGAATG 11 18752055 0.847236164 3 11 79 1 1.176091259 0 0.272727273 0.466666667 11 0 0 15 3L:18752034-18752067 7 14 1298 FBgn0001078 1154.326667 23.85 36.73 0.012128283 0.587002096 0.381159815 -7 4 -1.5 0.25 dme-miR-2b-2-5p 7mer-m8 TTGAAGA 3L 18752169 18752175 - 3L_18752169_18752175_- 0.58243008 0.52010491 0.551267495 0.044070572 ftz-f1 FBtr0304627|FBtr0347045|FBtr0075086|FBtr0075087 18750605|18750605|18751747|18751747 18752745|18752745|18752745|18752745 3L - 18752114 18752190 3'utr ftz-f1 FlyBase G37898.1 TAGTATCGTTCCCACTTGAAGATCGATTCTTGTATTTTTTTGCGCCAAGTGTCTTGCATAGTATTTGCGTCTAATCT 17 18752175 0.782322564 8 16 134 0.954545455 1.322219295 0.181818182 0.294117647 0.454545455 17 1 0 21 3L:18752114-18752190 7 ftz-f1 FBtr0075086|FBtr0075087|FBtr0304627|FBtr0347045 18751747|18751747|18750605|18750605 18752745|18752745|18752745|18752745 TTGAAGA 7mer-m8 dme-miR-2b-2-5p 3L - 18752155 18752189 3'utr ftz-f1 FlyBase G28635.1 AGTATCGTTCCCACTTGAAGATCGATTCTTGTATT 5 18752175 0.781863273 3 5 38 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3L:18752155-18752189 7 8.5 1299 FBgn0001078 1154.326667 23.85 36.73 0.0073636 0.35639413 0.231418459 0 0 0 0.25 dme-miR-184-5p 6mer3-8 TGATAA 3L 188028 188033 - 3L_188028_188033_- 0.945845805 0.998497377 0.972171591 0.037230303 rno FBtr0305549|FBtr0305548|FBtr0072532 187205|187984|187205 188548|188548|188548 3L - 188016 188057 3'utr rno FlyBase G32807.1 CGCCTCCTACTCACTAAGCATGATTGATAAACCCCAGCATAT 11 188035 0.95299921 6 9 40 0.882352941 1.176091259 0.176470588 0.272727273 0.529411765 11 2 0 15 3L:188016-188057 6 rno FBtr0072532|FBtr0305549|FBtr0305548 187205|187205|187984 188548|188548|188548 TGATAA 6mer3-8 dme-miR-184-5p 3L - 188029 188118 3'utr rno FlyBase G24810.1 AAATCCAAAAATGCTCTCGGTTTAGGTTTATAAAGTTTCCATTCACCTAAAAATCCTTCCACGCCTCCTACTCACTAAGCATGATTGATA 11 188057 0.987698241 9 11 95 1 1.146128036 0.071428571 0.272727273 0.428571429 11 0 0 14 3L:188029-188118 4 5 1300 FBgn0035106 2909.993333 29.82333333 45.86333333 0.001718217 0.167653962 0.109019551 2 24 13 0.25 dme-miR-304-5p 6mer2-7 GAGATT 3L 18822126 18822131 + 3L_18822126_18822131_+ 0.862608451 0.923165481 0.892886966 0.042820265 HipHop FBtr0075056|FBtr0075057 18821971|18821971 18822353|18822353 3L + 18822069 18822134 3'utr HipHop FlyBase G31237.1 TAAAGAAAGACAGAGATGTTAGCTTGGCAGGAGCCACAGAAAGATAGCCGCCATTTGGAGATTTCC 7 18822124 0.958206453 4 7 35 1 0.954242509 0.222222222 0.142857143 0.333333333 7 0 0 9 3L:18822069-18822134 6 HipHop FBtr0075056|FBtr0075057 18821971|18821971 18822353|18822353 GAGATT 6mer2-7 dme-miR-304-5p 3L + 18822076 18822134 3'utr HipHop FlyBase G23632.1 AGACAGAGATGTTAGCTTGGCAGGAGCCACAGAAAGATAGCCGCCATTTGGAGATTTCC 8 18822123 0.821962176 6 8 35 1 1.176091259 0.266666667 0.625 0.8 8 0 0 15 3L:18822076-18822134 6 4 1301 FBgn0036815 593.3433333 65.71333333 100.9466667 0.006741459 0.060870447 0.039624884 2 3 2.5 0.25 dme-miR-14-3p 7mer-A1 AGACTGA 3L 18828832 18828838 - 3L_18828832_18828838_- 0.72536744 0.806958724 0.766163082 0.057693762 Indy FBtr0075083|FBtr0075082|FBtr0301857|FBtr0075081 18828630|18828630|18828630|18828630 18829222|18829222|18829222|18829222 3L - 18828819 18828936 3'utr Indy FlyBase G37950.1 ACTTAATTGTTGCATTTAGCATAAAAATGGAAAAGATTTGGAAAAGTTAGAACAGTTTGTTCAATGGCAGCCCTGGCCTGCTAATATTTTAAATAACTAGACTGAGAGAACTTACATA 32 18828839 0.9035187 12 32 185 1 1.591064607 0.051282051 0.1875 0.333333333 32 0 0 39 3L:18828819-18828936 7 Indy FBtr0075083|FBtr0075082|FBtr0301857|FBtr0075081 18828630|18828630|18828630|18828630 18829222|18829222|18829222|18829222 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 18828796 18828892 3'utr Indy FlyBase G28680.1 AGTTAGAACAGTTTGTTCAATGGCAGCCCTGGCCTGCTAATATTTTAAATAACTAGACTGAGAGAACTTACATATTCATACATGTTTTTCAACTTGT 22 18828840 0.972444983 8 19 127 0.891891892 1.217483944 0.108108108 0.409090909 0.648648649 22 3 1 33 3L:18828796-18828892 7 17.5 1302 FBgn0036816 1686.326667 80.33666667 123.0166667 0.010377586 0.217833285 0.142257147 1 2 1.5 0.25 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 188454 188459 - 3L_188454_188459_- 0.711009314 0.494339266 0.60267429 0.153208826 rno FBtr0305549|FBtr0305548|FBtr0072532 187205|187984|187205 188548|188548|188548 3L - 188440 188505 3'utr rno FlyBase G32810.1 ACTTCGTTCATTCAAGCTTTCGATAATCCCCTCCCTTTGTGATTTGGTTCCTTGCCCTCGCCCCTA 66 188462 0.616170575 12 63 616 0.960526316 1.562292864 0.105263158 0.121212121 0.236842105 66 2 1 73 3L:188440-188505 6 rno FBtr0072532|FBtr0305549|FBtr0305548 187205|187205|187984 188548|188548|188548 GTTCCT 6mer2-7 dme-miR-276a-3p 3L - 188445 188496 3'utr rno FlyBase G24812.1 ATTCAAGCTTTCGATAATCCCCTCCCTTTGTGATTTGGTTCCTTGCCCTCGC 40 188469 0.796783624 8 37 363 0.915254237 1.033423755 0.016949153 0.375 0.576271186 40 1 4 54 3L:188445-188496 6 34.5 1303 FBgn0035106 2909.993333 29.82333333 45.86333333 0.011855697 1.156812339 0.752234901 3 10 6.5 0.25 dme-miR-932-5p 6mer2-7 GAATTG 3L 18877959 18877964 + 3L_18877959_18877964_+ 0.995292522 0.977634233 0.986463377 0.012486304 Ugt FBtr0075064 18877778 18878245 3L + 18877936 18877972 3'utr Ugt FlyBase G31284.1 AAGAAAACAGCTCACTAAAGTCTGAATTGTGTTTTGT 16 18877950 0.834634529 5 16 101 1 1.301029996 0.35 0.25 0.4 16 0 0 20 3L:18877936-18877972 6 Ugt FBtr0075064 18877778 18878245 GAATTG 6mer2-7 dme-miR-932-5p 3L + 18877933 18877965 3'utr Ugt FlyBase G23659.1 AAAAAGAAAACAGCTCACTAAAGTCTGAATTGT 7 18877951 0.965115805 4 7 35 1 1 0.4 0.285714286 0.5 7 0 0 10 3L:18877933-18877965 6 11.5 1304 FBgn0014075 2195.993333 49.69 76.23666667 0.00523681 0.231434896 0.15084605 9 8 8.5 0.25 dme-miR-980-3p 6mer3-8 GGCAGC 3L 18878829 18878834 - 3L_18878829_18878834_- 0.977401827 0.975717523 0.976559675 0.00119098 CG3961 FBtr0333712|FBtr0302322|FBtr0075078|FBtr0075077 18878248|18878651|18878248|18878248 18879086|18879086|18879086|18879086 3L - 18878775 18879064 3'utr CG3961 FlyBase G37968.1 AGACATCAACAACGAATCGAACTCAAGAAACTGGGAAGCATTCATTCAAATATGCCTATACCATTTTAAACTGATGATAACAAAGACTACAGATACAGATACGAAAGCGAACTGTCTAATTTTGTAGTATCGTCAATTCTTAGCACGTAAGAGGAGCGCAAGATACACCAGATACAGATACAATACACATAAAATATACACAACTTCAAACTGACAAGGAGAATCCTTTTGGCAGCCGCATTTTTTTATATAATTTAACCGAGAAGCGAACCTTAATTAATATATTAACT 233 18878835 0.966440359 39 217 1163 0.931899642 1.373580663 0.193548387 0.175965665 0.311827957 233 9 10 260 3L:18878775-18879064 6 CG3961 FBtr0075078|FBtr0075077|FBtr0333712|FBtr0302322 18878248|18878248|18878248|18878651 18879086|18879086|18879086|18879086 GGCAGC 6mer3-8 dme-miR-980-3p 3L - 18878821 18878874 3'utr CG3961 FlyBase G28697.1 AAAATATACACAACTTCAAACTGACAAGGAGAATCCTTTTGGCAGCCGCATTTT 54 18878836 0.712718692 8 51 259 0.941176471 1.204119983 0.258823529 0.425925926 0.635294118 54 1 4 80 3L:18878821-18878874 6 58.5 1305 FBgn0036821 610.73 21.53333333 32.27333333 0.095787009 2.716718266 1.812642016 1 2 1.5 0.25 dme-miR-1008-3p 7mer-A1 GCTGTGA 3L 18900769 18900775 - 3L_18900769_18900775_- 0.788043238 0.792757133 0.790400186 0.003333231 arx FBtr0075075 18900593 18900900 3L - 18900766 18900789 3'utr arx FlyBase G37998.1 TAAAATTAACATGTGCTGTGAAAC 8 18900778 0.723892102 2 7 43 0.833333333 1 0 0.375 0.583333333 8 2 0 10 3L:18900766-18900789 7 arx FBtr0075075 18900593 18900900 GCTGTGA 7mer-A1 dme-miR-1008-3p 3L - 18900764 18900788 3'utr arx FlyBase G28727.1 AAAATTAACATGTGCTGTGAAACAA 7 18900779 0.703538993 3 7 35 1 1.079181246 0 0.571428571 0.75 7 0 0 12 3L:18900764-18900788 7 7.5 1306 FBgn0036826 465.3333333 66.11666667 101.5966667 0.016117479 0.113435846 0.07382132 3 4 3.5 0.25 dme-miR-34-5p 8mer-A1 CACTGCCA 3L 18900869 18900876 - 3L_18900869_18900876_- 0.545346911 0.601114229 0.57323057 0.039433436 arx FBtr0075075 18900593 18900900 3L - 18900848 18900890 3'utr arx FlyBase G37999.1 TCAAGAATTACTCCCACTGCCAAAGAACAAAAACCAAAACATT 68 18900873 0.934896065 4 62 176 0.91025641 1.550228353 0.051282051 0.132352941 0.243589744 68 6 1 71 3L:18900848-18900890 8 arx FBtr0075075 18900593 18900900 CACTGCCA 8mer-A1 dme-miR-34-5p 3L - 18900849 18900888 3'utr arx FlyBase G28728.1 AAGAATTACTCCCACTGCCAAAGAACAAAAACCAAAACAT 73 18900873 0.915534299 4 73 175 1 2.021189299 0.057142857 0.356164384 0.552380952 73 0 0 105 3L:18900849-18900888 8 70.5 1307 FBgn0036826 465.3333333 66.11666667 101.5966667 0.151504298 1.06629695 0.693920404 -3 -3 -3 0.25 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 19003843 19003850 - 3L_19003843_19003850_- 0.632933914 0.639005289 0.635969602 0.004293128 nkd FBtr0075039|FBtr0332649|FBtr0332650 19003739|19003739|19003739 19004922|19005670|19004922 3L - 19003826 19003886 3'utr nkd FlyBase G38038.1 AAAAACAAAATGCATTTAACTCTTATTTACATAAAAAAGACTGATTTCCAATTAAACAATA 12 19003842 0.972362984 7 12 66 1 1.204119983 0 0.25 0.4375 12 0 0 16 3L:19003826-19003886 8 nkd FBtr0332649|FBtr0332650|FBtr0075039 19003739|19003739|19003739 19005670|19004922|19004922 AAGACTGA 8mer-A1 dme-miR-14-3p 3L - 19003827 19003869 3'utr nkd FlyBase G28758.1 AACTCTTATTTACATAAAAAAGACTGATTTCCAATTAAACAAT 11 19003842 0.583894125 4 9 64 0.904761905 1.278753601 0.047619048 0.545454545 0.761904762 11 2 0 19 3L:19003827-19003869 8 9.5 1308 FBgn0002945 3.333333333 0.083333333 0.136666667 2.85 114 69.51219512 -8 -8 -8 0.25 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 19059690 19059697 - 3L_19059690_19059697_- 0.62439668 0.632643091 0.628519885 0.005831085 CG3797 FBtr0332648 19059398 19060274 3L - 19059676 19059733 3'utr CG3797 FlyBase G38042.1 TTTACAGCTATTTCATTCAATTAATATTTCAATTCAAAGACTGACAACACCTTTCGTA 19 19059701 0.694787016 7 14 130 0.739130435 0.62838893 0 0.210526316 0.347826087 19 3 3 17 3L:19059676-19059733 8 CG3797 FBtr0332648 19059398 19060274 AAGACTGA 8mer-A1 dme-miR-14-3p 3L - 19059671 19059711 3'utr CG3797 FlyBase G28761.1 AATATTTCAATTCAAAGACTGACAACACCTTTCGTATGTTT 23 19059702 0.690026992 5 17 126 0.771428571 0.954242509 0 0.260869565 0.514285714 23 6 2 27 3L:19059671-19059711 8 19.5 1309 FBgn0036842 550.5966667 23.31333333 35.34666667 0.035416124 0.836431227 0.551678612 4 5 4.5 0.25 dme-miR-1006-3p 6mer3-8 CGAATT 3L 19094676 19094681 + 3L_19094676_19094681_+ 0.702384293 0.76921297 0.735798632 0.047255027 MESR6 FBtr0075026|FBtr0330090 19094563|19094563 19094760|19094760 3L + 19094620 19094701 3'utr MESR6 FlyBase G31317.1 TACAAAACTCGTTTGGGCGGGAAAACTCCACGACTAAAAGATACCCGTAGTGATTTCGAATTAGAACCTAATGATGGAAAAT 57 19094674 0.77105135 7 55 303 0.955882353 1.335792102 0.294117647 0.157894737 0.294117647 57 1 2 65 3L:19094620-19094701 6 MESR6 FBtr0330090|FBtr0075026 19094563|19094563 19094760|19094760 CGAATT 6mer3-8 dme-miR-1006-3p 3L + 19094594 19094703 3'utr MESR6 FlyBase G23682.1 CGCCACTGCGAATTAGATTCTGAATTTACAAAACTCGTTTGGGCGGGAAAACTCCACGACTAAAAGATACCCGTAGTGATTTCGAATTAGAACCTAATGATGGAAAATCC 34 19094674 0.97297931 10 32 187 0.93877551 1.662757832 0.326530612 0.352941176 0.551020408 34 3 0 46 3L:19094594-19094703 6 31.5 1310 FBgn0036846 174.09 12.22333333 18.78 0.180940893 2.577038451 1.677316294 2 2 2 0.25 dme-miR-999-3p 6mer2-7 GTTAAC 3L 19099421 19099426 - 3L_19099421_19099426_- 0.990191022 0.999473262 0.994832142 0.006563577 Gem2 FBtr0330093|FBtr0075032 19099121|19099121 19099480|19099480 3L - 19099390 19099452 3'utr Gem2 FlyBase G38079.1 AATTTAAGCGCAAATTCGACTATTTTGTTAACTAAAAAGCCAAAAGCTACGCTGGTAATTTTG 14 19099427 0.980144609 8 13 96 0.941176471 0.903089987 0.058823529 0.214285714 0.352941176 14 0 1 16 3L:19099390-19099452 6 Gem2 FBtr0330093|FBtr0075032 19099121|19099121 19099480|19099480 GTTAAC 6mer2-7 dme-miR-999-3p 3L - 19099390 19099447 3'utr Gem2 FlyBase G28787.1 AAGCGCAAATTCGACTATTTTGTTAACTAAAAAGCCAAAAGCTACGCTGGTAATTTTG 14 19099427 0.689386233 8 14 96 1 1.301029996 0.1 0.428571429 0.6 14 0 0 20 3L:19099390-19099447 6 10 1311 FBgn0036850 154 17.00333333 26.24666667 0.064935065 0.588119976 0.381000762 1 1 1 0.25 dme-miR-283-5p 6mer3-8 TGATAT 3L 19257484 19257489 - 3L_19257484_19257489_- 0.896721789 0.980416239 0.938569014 0.059180878 nes FBtr0075021|FBtr0075019 19257410|19257280 19258010|19258010 3L - 19257475 19257584 3'utr nes FlyBase G38091.1 ATTTCATTTATTGAAAGGGGAGCAGCGCTCAAGGAGACTAACTAAGCCATAAAGACAGTTTTATACCAATGTAAAGATGATGCGACGATATATTTTGATATGCTCACGCT 39 19257494 0.988591338 13 29 270 0.745098039 1.579783597 0.137254902 0.282051282 0.450980392 39 13 0 38 3L:19257475-19257584 6 nes FBtr0075021|FBtr0075019 19257410|19257280 19258010|19258010 TGATAT 6mer3-8 dme-miR-283-5p 3L - 19257475 19257613 3'utr nes FlyBase G28798.1 ACACCAGGGTCTTTGAAAATCAAACTCAAATTTCATTTATTGAAAGGGGAGCAGCGCTCAAGGAGACTAACTAAGCCATAAAGACAGTTTTATACCAATGTAAAGATGATGCGACGATATATTTTGATATGCTCACGCT 33 19257493 0.986122897 13 29 241 0.906976744 1.591064607 0.186046512 0.242424242 0.418604651 33 4 0 39 3L:19257475-19257613 6 21.5 1312 FBgn0026630 1182.346667 63.70333333 97.51666667 0.018184176 0.337501962 0.220475132 5 4 4.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3L 19257803 19257809 - 3L_19257803_19257809_- 0.822855328 0.823218399 0.823036864 0.00025675 nes FBtr0075021|FBtr0075019 19257410|19257280 19258010|19258010 3L - 19257609 19257837 3'utr nes FlyBase G38092.1 ACTTTGAACATATATATATATTGTCTGCCTAGTCAAGGTGGAGTCATCCCCTAGTATGCAGTGTGGATTTTGGCGATAAGATATTGTTTTATCTTGCCTAAGAACACATTCTCAGTCGTATATATATATATATATATAAACATTATGGAATTGTAAATTGTATAAGAGTATAAACCCGTTGAGTTCATCTAGGAACTAGACAGATCACTCGAGACTATAACGATACACC 58 19257814 0.906058157 26 52 435 0.910447761 1.785329835 0.074626866 0.120689655 0.23880597 58 6 0 61 3L:19257609-19257837 7 nes FBtr0075021|FBtr0075019 19257410|19257280 19258010|19258010 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L - 19257761 19257826 3'utr nes FlyBase G28800.1 ATATATATATTGTCTGCCTAGTCAAGGTGGAGTCATCCCCTAGTATGCAGTGTGGATTTTGGCGAT 14 19257813 0.979150593 6 13 94 1 1.278753601 0.315789474 0.214285714 0.421052632 14 0 0 19 3L:19257761-19257826 7 19.5 1313 FBgn0026630 1182.346667 63.70333333 97.51666667 0.016492625 0.306106431 0.199965818 5 4 4.5 0.25 dme-miR-1008-3p 6mer3-8 AGCTGT 3L 19262646 19262651 - 3L_19262646_19262651_- 0.999597898 0.999594226 0.999596062 2.62E-06 Max FBtr0345391|FBtr0075018 19262230|19262524 19262875|19262875 3L - 19262542 19262672 3'utr Max FlyBase G38104.1 CCGATAATCATAATCATCATTAGCTGTAAGCCCAAAATGTAACCCACCCAATCGACCTTAATTTGTATGCGTGCGTCTTTTCTACTTTCAACAAATTGTCACTCTGTGCGCAAAGAATAAAGTAAACTAGT 33 19262653 0.976903271 16 29 215 0.925 1.267171728 0.125 0.181818182 0.325 33 2 1 37 3L:19262542-19262672 6 Max FBtr0345391|FBtr0075018 19262230|19262524 19262875|19262875 AGCTGT 6mer3-8 dme-miR-1008-3p 3L - 19262613 19262672 3'utr Max FlyBase G28808.1 CCGATAATCATAATCATCATTAGCTGTAAGCCCAAAATGTAACCCACCCAATCGACCTTA 13 19262662 0.985424886 3 9 62 0.727272727 0.726998728 0.318181818 0.692307692 0.818181818 13 4 2 16 3L:19262613-19262672 6 12 1314 FBgn0017578 482.9933333 60.31 92.42333333 0.024845063 0.198971978 0.129837343 2 11 6.5 0.25 dme-miR-305-3p 6mer3-8 ATGTGC 3L 19266809 19266814 - 3L_19266809_19266814_- 0.920009203 0.919751641 0.919880422 0.000182151 CG9629 FBtr0075017 19266471 19266836 3L - 19266779 19266828 3'utr CG9629 FlyBase G38112.1 TACGATCAATTTTAATGTGCTACAATTTACAATACTATTACATATAATGT 14 19266813 0.785005521 2 13 125 0.941176471 1.204119983 0.058823529 0.214285714 0.352941176 14 1 0 16 3L:19266779-19266828 6 CG9629 FBtr0075017 19266471 19266836 ATGTGC 6mer3-8 dme-miR-305-3p 3L - 19266757 19266826 3'utr CG9629 FlyBase G28812.1 CGATCAATTTTAATGTGCTACAATTTACAATACTATTACATATAATGTCCAAAACTAAATGCAACTGATA 15 19266813 0.9873988 5 15 127 1 1.278753601 0.210526316 0.2 0.368421053 15 0 0 19 3L:19266757-19266826 6 11.5 1315 FBgn0036857 368.37 21.64666667 32.97666667 0.031218612 0.531259624 0.348731426 -1 -1 -1 0.25 dme-miR-283-5p 8mer-m1 TGATATTT 3L 19585131 19585138 - 3L_19585131_19585138_- 0.549135048 0.530906157 0.540020603 0.012889708 CG9231 FBtr0074972|FBtr0344994 19585091|19585091 19585473|19585473 3L - 19585103 19585150 3'utr CG9231 FlyBase G38172.1 ATAGATATTCAGTGATATTTGTAATGTTGTATTATCAAAAATAAAACA 17 19585143 0.98674877 8 14 145 0.85 0.753327667 0.05 0.176470588 0.3 17 1 2 17 3L:19585103-19585150 8 CG9231 FBtr0074972|FBtr0344994 19585091|19585091 19585473|19585473 TGATATTT 8mer-m1 dme-miR-283-5p 3L - 19585118 19585150 3'utr CG9231 FlyBase G28850.1 ATAGATATTCAGTGATATTTGTAATGTTGTATT 7 19585143 0.957875442 3 7 63 1 1.079181246 0 0.428571429 0.666666667 7 0 0 12 3L:19585118-19585150 8 10.5 1316 FBgn0036887 129 20.06333333 30.59 0.081395349 0.523342748 0.343249428 5 5 5 0.25 dme-miR-277-3p 6mer3-8 TGCATT 3L 19590925 19590930 - 3L_19590925_19590930_- 0.956401729 0.889459949 0.922930839 0.047335001 ash1 FBtr0306010|FBtr0306009 19590771|19590771 19591301|19591301 3L - 19590912 19590976 3'utr ash1 FlyBase G38179.1 CAAAACTATCCCCCTCTCGTCTTTGCAATTGAAGGCGTTTGACTTTTGCATTGTTATTTTAAATT 46 19590931 0.776344362 12 45 362 0.984615385 1.505149978 0.061538462 0.326086957 0.523076923 46 0 1 64 3L:19590912-19590976 6 ash1 FBtr0306010|FBtr0306009 19590771|19590771 19591301|19591301 TGCATT 6mer3-8 dme-miR-277-3p 3L - 19590911 19590975 3'utr ash1 FlyBase G28856.1 AAAACTATCCCCCTCTCGTCTTTGCAATTGAAGGCGTTTGACTTTTGCATTGTTATTTTAAATTA 35 19590931 0.738578334 7 35 283 1 1.698970004 0.08 0.285714286 0.5 35 0 0 50 3L:19590911-19590975 6 35.5 1317 FBgn0005386 720.8833333 11.4 17.44333333 0.049245139 3.114035088 2.035161475 1 1 1 0.25 dme-miR-282-5p 6mer3-8 AGAGGC 3L 19591250 19591255 - 3L_19591250_19591255_- 0.999210252 0.990159515 0.994684884 0.006399882 ash1 FBtr0306010|FBtr0306009 19590771|19590771 19591301|19591301 3L - 19591219 19591308 stop_codon ash1 FlyBase G38181.1 AACATAACCGATGTAACGCGAGTAGATTAAGCCGTGTATATACGCCTAAAGTTAGAGGCATTGATTAATATTTATGGAACTTCAATTAAC 24 19591256 0.976446475 8 24 156 1 1.447158031 0.142857143 0.166666667 0.285714286 24 0 0 28 3L:19591219-19591308 6 ash1 FBtr0306010|FBtr0306009 19590771|19590771 19591301|19591301 AGAGGC 6mer3-8 dme-miR-282-5p 3L - 19591243 19591275 3'utr ash1 FlyBase G28858.1 GTGTATATACGCCTAAAGTTAGAGGCATTGATT 12 19591256 0.78400722 5 11 82 0.909090909 1.301029996 0.181818182 0.416666667 0.681818182 12 2 0 20 3L:19591243-19591275 6 15 1318 FBgn0005386 720.8833333 11.4 17.44333333 0.020807805 1.315789474 0.859927384 1 1 1 0.25 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3L 19613357 19613364 + 3L_19613357_19613364_+ 0.443357115 0.565858438 0.504607777 0.0866215 CG9376 FBtr0074946 19613260 19613489 3L + 19613339 19613424 3'utr CG9376 FlyBase G31405.1 AACCACGTCATCATCCCGTCTAGTCAGCAGCTTAGGAACTACCAAAAAGCAATTACCACTTTAATGTTACATGTTTAATCATATTA 85 19613352 0.971182698 12 82 478 0.961538462 1.698970004 0.259615385 0.176470588 0.326923077 85 3 1 100 3L:19613339-19613424 8 CG9376 FBtr0074946 19613260 19613489 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L + 19613337 19613390 3'utr CG9376 FlyBase G23745.1 AGAACCACGTCATCATCCCGTCTAGTCAGCAGCTTAGGAACTACCAAAAAGCAA 51 19613352 0.939950201 8 46 277 0.902439024 1.568201724 0.182926829 0.450980392 0.658536585 51 7 1 74 3L:19613337-19613390 8 63 1319 FBgn0036893 103 12.34333333 18.84333333 0.611650485 5.103969754 3.343357509 5 5 5 0.25 dme-miR-79-3p 6mer3-8 TAGCTT 3L 19624535 19624540 - 3L_19624535_19624540_- 0.995593152 0.992241545 0.993917348 0.00237001 wnd FBtr0074965|FBtr0074963|FBtr0074964 19624404|19624404|19624404 19625547|19625547|19625547 3L - 19624472 19624554 3'utr wnd FlyBase G38236.1 ACTAGTTGGATGTTTAGCTTCGTAAGATGTGTCGTTCCTTTGTGGGCGACGTTTCTCTACATTATGTAAATGTACTTCATATT 10 19624541 0.987436245 7 10 88 1 1.113943352 0.076923077 0.2 0.384615385 10 0 0 13 3L:19624472-19624554 6 wnd FBtr0074964|FBtr0074965|FBtr0074963 19624404|19624404|19624404 19625547|19625547|19625547 TAGCTT 6mer3-8 dme-miR-79-3p 3L - 19624494 19624555 3'utr wnd FlyBase G28897.1 CACTAGTTGGATGTTTAGCTTCGTAAGATGTGTCGTTCCTTTGTGGGCGACGTTTCTCTACA 6 19624540 0.984860413 5 6 46 1 0.954242509 0.444444444 0.5 0.666666667 6 0 0 9 3L:19624494-19624555 6 5 1320 FBgn0036896 311 9.553333333 14.51666667 0.01607717 0.52337753 0.344431688 1 0 0.5 0.25 dme-miR-277-3p 7mer-m8 TGCATTT 3L 19625252 19625258 - 3L_19625252_19625258_- 0.543541051 0.620080763 0.581810907 0.054121741 wnd FBtr0074965|FBtr0074963|FBtr0074964 19624404|19624404|19624404 19625547|19625547|19625547 3L - 19625231 19625312 3'utr wnd FlyBase G38241.1 AAACCCTTTTGGGTTCTTTGGGGCGATCTTTGTCCGTGTCGTACTCGTATCGCATGCATTTCCTATTTTGCTAAATATAATT 23 19625258 0.989371264 11 23 235 1 1.397940009 0.2 0.086956522 0.16 23 0 0 25 3L:19625231-19625312 7 wnd FBtr0074964|FBtr0074965|FBtr0074963 19624404|19624404|19624404 19625547|19625547|19625547 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 19625236 19625312 3'utr wnd FlyBase G28901.1 AAACCCTTTTGGGTTCTTTGGGGCGATCTTTGTCCGTGTCGTACTCGTATCGCATGCATTTCCTATTTTGCTAAATA 15 19625258 0.900700155 9 15 156 1 1.431363764 0.185185185 0.533333333 0.740740741 15 0 0 27 3L:19625236-19625312 7 15 1321 FBgn0036896 311 9.553333333 14.51666667 0.048231511 1.570132589 1.033295063 0 0 0 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 19638706 19638711 - 3L_19638706_19638711_- 0.948397649 0.989041333 0.968719491 0.028739436 CG8786 FBtr0331862|FBtr0331862|FBtr0331862 19637205|19637205|19637205 19639572|19639572|19639572 3L - 19638688 19638774 5'utr CG8786 FlyBase G38261.1 CAGGGGAATCAGATGCAGTATTAATTATTAAGTCGCCGTGAAGTGCGTTAAACAAAAACATTTCTGTGACAGTTGAATATATTGATA 132 19638713 0.903648385 11 127 860 0.963414634 2.198657087 0.109756098 0.181818182 0.341463415 132 6 0 158 3L:19638688-19638774 6 CG8786 FBtr0331862|FBtr0331862|FBtr0331862 19637205|19637205|19637205 19639572|19639572|19639572 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 19638668 19638773 5'utr CG8786 FlyBase G28916.1 AGGGGAATCAGATGCAGTATTAATTATTAAGTCGCCGTGAAGTGCGTTAAACAAAAACATTTCTGTGACAGTTGAATATATTGATATTTTGTATACTCTAAGTTGC 73 19638713 0.922138269 11 70 511 0.95412844 2.017033339 0.110091743 0.328767123 0.550458716 73 5 0 104 3L:19638668-19638773 6 80 1322 FBgn0036897 334.61 15.00666667 22.97333333 0.239084307 5.330964016 3.482298317 2 2 2 0.25 dme-miR-304-5p 7mer-m8 TGAGATT 3L 19714622 19714628 - 3L_19714622_19714628_- 0.619020097 0.609189793 0.614104945 0.006951072 Trpml FBtr0074952 19714416 19715268 3L - 19714583 19714648 3'utr Trpml FlyBase G38288.1 AACTGCACTGGTCGACAAAATGAGATTTTTGGCAGTCTAAGCAAATAGTTATTTTAGAAAGTGTTT 8 19714628 0.983870499 4 6 54 0.9 0.954242509 0.1 0.25 0.4 8 1 0 9 3L:19714583-19714648 7 Trpml FBtr0074952 19714416 19715268 TGAGATT 7mer-m8 dme-miR-304-5p 3L - 19714603 19714645 3'utr Trpml FlyBase G28933.1 TGCACTGGTCGACAAAATGAGATTTTTGGCAGTCTAAGCAAAT 5 19714628 0.982196204 3 4 33 0.857142857 0.77815125 0.142857143 0.4 0.571428571 5 1 0 6 3L:19714603-19714645 7 5.5 1323 FBgn0262516 372.8066667 14.61333333 22.29666667 0.014752955 0.376368613 0.246673643 0 0 0 0.25 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3L 19720015 19720022 - 3L_19720015_19720022_- 0.468357455 0.5224034 0.495380427 0.038216222 CG42637 FBtr0302279|FBtr0302277|FBtr0302278 19719525|19719525|19719525 19720443|19720443|19720443 3L - 19719982 19720036 3'utr CG42637 FlyBase G38300.1 AGCCGAAAAAACCGTCTAGTCACAAGGTCTTCAGACTAGTTATTGTTTTATATAA 10 19720022 0.965434724 3 9 52 0.9375 0.875061263 0.5625 0.5 0.6875 10 0 1 15 3L:19719982-19720036 8 CG42637 FBtr0302278|FBtr0302277|FBtr0302279 19719525|19719525|19719525 19720443|19720443|19720443 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L - 19719992 19720036 3'utr CG42637 FlyBase G28943.1 AGCCGAAAAAACCGTCTAGTCACAAGGTCTTCAGACTAGTTATTG 11 19720022 0.937541916 4 11 43 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 3L:19719992-19720036 8 9.5 1324 FBgn0261360 1575.906667 29.86333333 45.63333333 0.006028276 0.318115861 0.208181154 0 0 0 0.25 dme-miR-304-5p 7mer-m8 TGAGATT 3L 19746038 19746044 - 3L_19746038_19746044_- 0.413795542 0.619513933 0.516654738 0.145464876 CG42638 FBtr0302283 19745832 19746684 3L - 19746023 19746063 5'utr CG42638 FlyBase G38320.1 ACTGCACTGGTCGACAAAATGAGATTTTTGGCAGTCTAAGC 8 19746044 0.957016742 2 8 61 1 0.954242509 0.111111111 0.125 0.222222222 8 0 0 9 3L:19746023-19746063 7 CG42638 FBtr0302283 19745832 19746684 TGAGATT 7mer-m8 dme-miR-304-5p 3L - 19746021 19746062 5'utr CG42638 FlyBase G28957.1 CTGCACTGGTCGACAAAATGAGATTTTTGGCAGTCTAAGCAA 8 19746036 0.830166943 3 7 51 0.9 0.954242509 0.3 0.25 0.4 8 1 0 9 3L:19746021-19746062 7 8 1325 FBgn0261361 372.8066667 14.61333333 22.29666667 0.021458844 0.547445255 0.358798027 0 -8 -4 0.25 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3L 19751431 19751438 - 3L_19751431_19751438_- 0.524064292 0.550613835 0.537339063 0.018773331 Gyc76C FBtr0333879|FBtr0302280|FBtr0302282|FBtr0302281 19750941|19750941|19750941|19750941 19751859|19751859|19751859|19751859 3L - 19751388 19751454 3'utr Gyc76C FlyBase G38332.1 GAAGCCGAAAAAACCGTCTAGTCACAAGGTCTTCAGACTAGTTATTGTTTTATATAAAATAAACACA 15 19751438 0.955641751 5 14 72 0.9375 0.875061263 0.3125 0.066666667 0.125 15 0 1 15 3L:19751388-19751454 8 Gyc76C FBtr0302282|FBtr0302281|FBtr0333879|FBtr0302280 19750941|19750941|19750941|19750941 19751859|19751859|19751859|19751859 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L - 19751401 19751455 3'utr Gyc76C FlyBase G28967.1 AGAAGCCGAAAAAACCGTCTAGTCACAAGGTCTTCAGACTAGTTATTGTTTTATA 12 19751438 0.962288132 4 11 58 0.941176471 1.204119983 0.058823529 0.25 0.470588235 12 1 0 16 3L:19751401-19751455 8 11.5 1326 FBgn0266136 1575.906667 29.86333333 45.63333333 0.007297386 0.385087621 0.252008766 0 0 0 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA 3L 19803083 19803090 + 3L_19803083_19803090_+ 0.623318571 0.622009715 0.622664143 0.000925532 Ir76a FBtr0301606 19802012 19803427 3L + 19803049 19803098 3'utr Ir76a FlyBase G31441.1 AGCGGCTGAAACTTATGGTGGATGATATTTACTTTGCATTTACGGTGGCG 10 19803082 0.753568534 4 10 77 1 1.146128036 0.714285714 0.4 0.571428571 10 0 0 14 3L:19803049-19803098 8 Ir76a FBtr0301606 19802012 19803427 TGCATTTA 8mer-A1 dme-miR-277-3p 3L + 19803041 19803099 3'utr Ir76a FlyBase G23784.1 TGCCCTAAAGCGGCTGAAACTTATGGTGGATGATATTTACTTTGCATTTACGGTGGCGT 7 19803081 0.983702874 4 6 50 1 1 0.4 0.285714286 0.5 7 0 0 10 3L:19803041-19803099 8 5 1327 FBgn0260874 218.0066667 15.19666667 23.07666667 0.022935078 0.329019522 0.216669074 1 2 1.5 0.25 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3L 19810499 19810505 - 3L_19810499_19810505_- 0.613451723 0.612715112 0.613083417 0.000520855 Cyp305a1 FBtr0074925 19810401 19810551 3L - 19810466 19810521 3'utr Cyp305a1 FlyBase G38376.1 TATAGGTCAAGAGATATGGTGCTGAATCCACTAGGATATTTCCAAGGATTCCGAAA 97 19810505 0.962216806 8 96 501 0.991735537 1.77815125 0.074380165 0.206185567 0.363636364 97 0 1 120 3L:19810466-19810521 7 Cyp305a1 FBtr0074925 19810401 19810551 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3L - 19810465 19810536 3'utr Cyp305a1 FlyBase G28998.1 CGATGGTGTCGGTATTATAGGTCAAGAGATATGGTGCTGAATCCACTAGGATATTTCCAAGGATTCCGAAAA 69 19810505 0.966688779 6 65 351 0.96 1.681241237 0.15 0.333333333 0.54 69 3 1 96 3L:19810465-19810536 7 80 1328 FBgn0036910 2.666666667 0.18 0.286666667 30 444.4444444 279.0697674 0 0 0 0.25 dme-miR-1003-3p 7mer-A1 TGTGAGA 3L 19816446 19816452 - 3L_19816446_19816452_- 0.420971756 0.426599773 0.423785764 0.003979597 Fibp FBtr0332728 19816163 19816661 3L - 19816440 19816486 5'utr Fibp FlyBase G38390.1 CAATCGGGAGCTGCGCGATCTTTTCGTCGATCTCTGTGAGAAGCTTA 53 19816452 0.776996573 9 50 428 0.952380952 1.77815125 0.142857143 0.150943396 0.285714286 53 3 0 60 3L:19816440-19816486 7 Fibp FBtr0332728 19816163 19816661 TGTGAGA 7mer-A1 dme-miR-1003-3p 3L - 19816398 19816483 5'utr Fibp FlyBase G29003.1 TCGGGAGCTGCGCGATCTTTTCGTCGATCTCTGTGAGAAGCTTATTGATCCTTGGCGTCAGAATGGCTGGAACCGTGAGCAAGTGA 39 19816452 0.782832515 8 37 298 0.964285714 1.431363764 0.178571429 0.358974359 0.553571429 39 1 1 54 3L:19816398-19816483 7 42 1329 FBgn0036911 257 25.10333333 38.12666667 0.163424125 1.673084584 1.101591187 0 0 0 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3L 19831866 19831872 - 3L_19831866_19831872_- 0.502534867 0.498027234 0.50028105 0.003187425 trc FBtr0074922|FBtr0332154 19831389|19830862 19832075|19832075 3L - 19831841 19831935 3'utr trc FlyBase G38394.1 AAATCCCCGATTTTCCTTTTTGAATGTCTTACCTACATGTGTATTTAAATACTAGCTAACATTTGTGATTCCAAACAAGAGAAGAATATGATAAC 71 19831873 0.982442607 11 70 526 0.988636364 1.939519253 0.011363636 0.197183099 0.352272727 71 1 0 87 3L:19831841-19831935 7 trc FBtr0074922|FBtr0332154 19831389|19830862 19832075|19832075 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 19831853 19831896 3'utr trc FlyBase G29007.1 TGTATTTAAATACTAGCTAACATTTGTGATTCCAAACAAGAGAA 35 19831873 0.916829377 6 31 258 0.865384615 1.653212514 0.019230769 0.371428571 0.576923077 35 7 0 45 3L:19831853-19831896 7 48.5 1330 FBgn0003744 320.6866667 15.89666667 24.39333333 0.151237969 3.050954078 1.988248155 1 1 1 0.25 dme-miR-283-5p 8mer-A1 TGATATTA 3L 19867555 19867562 - 3L_19867555_19867562_- 0.587495801 0.588321733 0.587908767 0.000583999 Rab8 FBtr0074921 19867486 19868552 3L - 19867542 19867607 3'utr Rab8 FlyBase G38404.1 AGTAATATAAATAATGTGAAATTAAATGATAACTAATTGCATATTTGATATTAATTAATTACTTGT 16 19867563 0.776200893 8 16 139 1 1.322219295 0.047619048 0.1875 0.380952381 16 0 0 21 3L:19867542-19867607 8 Rab8 FBtr0074921 19867486 19868552 TGATATTA 8mer-A1 dme-miR-283-5p 3L - 19867548 19867628 3'utr Rab8 FlyBase G29014.1 TTATGAACACATACACAGCGCAGTAATATAAATAATGTGAAATTAAATGATAACTAATTGCATATTTGATATTAATTAATT 12 19867569 0.986614097 9 11 94 0.9375 1.176091259 0.0625 0.333333333 0.5 12 1 0 15 3L:19867548-19867628 8 4.5 1331 FBgn0262518 1251.336667 71.43666667 109.69 0.003596155 0.062992861 0.041024706 1 7 4 0.25 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 19867589 19867594 - 3L_19867589_19867594_- 0.812018548 0.782725897 0.797372222 0.020712996 Rab8 FBtr0074921 19867486 19868552 3L - 19867542 19867607 3'utr Rab8 FlyBase G38404.1 AGTAATATAAATAATGTGAAATTAAATGATAACTAATTGCATATTTGATATTAATTAATTACTTGT 16 19867596 0.776200893 8 16 139 1 1.322219295 0.047619048 0.1875 0.380952381 16 0 0 21 3L:19867542-19867607 6 Rab8 FBtr0074921 19867486 19868552 ATGTGA 6mer3-8 dme-miR-1003-3p 3L - 19867548 19867628 3'utr Rab8 FlyBase G29014.1 TTATGAACACATACACAGCGCAGTAATATAAATAATGTGAAATTAAATGATAACTAATTGCATATTTGATATTAATTAATT 12 19867595 0.986614097 9 11 94 0.9375 1.176091259 0.0625 0.333333333 0.5 12 1 0 15 3L:19867548-19867628 6 8 1332 FBgn0262518 1251.336667 71.43666667 109.69 0.006393164 0.111987308 0.072932811 2 1 1.5 0.25 dme-miR-307a-3p 6mer3-8 GGTTGT 3L 19868102 19868107 - 3L_19868102_19868107_- 0.742068701 0.559249491 0.650659096 0.129272696 Rab8 FBtr0308832|FBtr0308833|FBtr0074921 19868034|19867706|19867486 19868552|19868552|19868552 3L - 19868080 19868183 3'utr Rab8 FlyBase G38408.1 AGCCAATCCAACCCGCCCGCGTCCTTCTCGAAGAGGTTTTAGTATTTACGGAATTATGATTTTCTCTAGCAGCCATGGTTGTCGATTTGTAAATTATTAATTGT 61 19868107 0.809993318 17 60 451 0.986842105 1.875061263 0.078947368 0.213114754 0.368421053 61 1 0 75 3L:19868080-19868183 6 Rab8 FBtr0308832|FBtr0308833|FBtr0074921 19868034|19867706|19867486 19868552|19868552|19868552 GGTTGT 6mer3-8 dme-miR-307a-3p 3L - 19868086 19868179 3'utr Rab8 FlyBase G29019.1 AATCCAACCCGCCCGCGTCCTTCTCGAAGAGGTTTTAGTATTTACGGAATTATGATTTTCTCTAGCAGCCATGGTTGTCGATTTGTAAATTATT 33 19868107 0.984224098 10 31 247 0.906976744 1.591064607 0.11627907 0.242424242 0.418604651 33 4 0 39 3L:19868086-19868179 6 32 1333 FBgn0262518 1251.336667 71.43666667 109.69 0.025572654 0.447949232 0.291731243 0 0 0 0.25 dme-miR-932-5p 6mer2-7 GAATTG 3L 19881258 19881263 + 3L_19881258_19881263_+ 0.51435788 0.822940382 0.668649131 0.218200778 CG8334 FBtr0332148|FBtr0332149|FBtr0332150|FBtr0332151 19881066|19881066|19881066|19881066 19881783|19881783|19881783|19881783 3L + 19881163 19881380 3'utr CG8334 FlyBase G31529.1 TTGTTATTTACTATTCTAAGCCTATTTTGATTTTCTGCAATAGTTGATTAATTATCCCCTAATTAGTTTTAGGACGAATTATTTTTCTTTGCCGAGAATTGTGTAATGCATGTAATATACAATATTCATATTTAGCTTGTAGATGATATGTTATATTGGTTGGCCAATGTGGAGCTTAGGTTGTTACGCCGAACAAATCCATTCTCAATAGTTTCTTG 42 19881252 0.987587027 19 40 368 0.980769231 1.40654018 0.326923077 0.214285714 0.365384615 42 0 1 51 3L:19881163-19881380 6 CG8334 FBtr0332150|FBtr0332151|FBtr0332148|FBtr0332149 19881066|19881066|19881066|19881066 19881783|19881783|19881783|19881783 GAATTG 6mer2-7 dme-miR-932-5p 3L + 19881214 19881282 3'utr CG8334 FlyBase G23841.1 TTATCCCCTAATTAGTTTTAGGACGAATTATTTTTCTTTGCCGAGAATTGTGTAATGCATGTAATATAC 12 19881252 0.987598913 8 11 112 0.947368421 0.954242509 0.421052632 0.333333333 0.578947368 12 0 1 18 3L:19881214-19881282 6 10.5 1334 FBgn0036913 1095.78 21.01 32.23333333 0.009582215 0.499762018 0.325749741 6 6 6 0.25 dme-miR-932-5p 6mer3-8 GGAATT 3L 19881472 19881477 + 3L_19881472_19881477_+ 0.999903116 0.965279943 0.98259153 0.0244823 CG8334 FBtr0332148|FBtr0332149|FBtr0332150|FBtr0332151 19881066|19881066|19881066|19881066 19881783|19881783|19881783|19881783 3L + 19881448 19881489 3'utr CG8334 FlyBase G31531.1 ATTATTTATGCCAGACCATGTCGTGGAATTCCATTTAATTTG 8 19881476 0.727539148 3 7 68 0.875 0.84509804 0.25 0 0 8 1 0 7 3L:19881448-19881489 6 CG8334 FBtr0332150|FBtr0332151|FBtr0332148|FBtr0332149 19881066|19881066|19881066|19881066 19881783|19881783|19881783|19881783 GGAATT 6mer3-8 dme-miR-932-5p 3L + 19881452 19881495 3'utr CG8334 FlyBase G23844.1 TTTATGCCAGACCATGTCGTGGAATTCCATTTAATTTGTAATTA 5 19881476 0.970495464 5 5 47 1 0.84509804 0.142857143 0.4 0.571428571 5 0 0 7 3L:19881452-19881495 6 6 1335 FBgn0036913 1095.78 21.01 32.23333333 0.005475552 0.285578296 0.186142709 -4 -4 -4 0.25 dme-miR-277-3p 6mer2-7 GCATTT 3L 19912425 19912430 + 3L_19912425_19912430_+ 0.85533773 0.512573399 0.683955565 0.242370961 Prp3 FBtr0074892|FBtr0074891 19912327|19912327 19912504|19912504 3L + 19912382 19912459 3'utr Prp3 FlyBase G31537.1 TCGGAAAGATACAAGTCTGAATTAAAGTTTTGAAGCGCGCTACGCATTTGATGTTATTATTTTCGAAGCTATTCGGAA 18 19912429 0.980944524 9 15 109 0.884615385 1.361727836 0.192307692 0.222222222 0.461538462 18 3 0 23 3L:19912382-19912459 6 Prp3 FBtr0074892|FBtr0074891 19912327|19912327 19912504|19912504 GCATTT 6mer2-7 dme-miR-277-3p 3L + 19912387 19912436 3'utr Prp3 FlyBase G23847.1 AAGATACAAGTCTGAATTAAAGTTTTGAAGCGCGCTACGCATTTGATGTT 9 19912429 0.990492863 4 6 60 0.777777778 1.146128036 0.555555556 0.555555556 0.777777778 9 4 0 14 3L:19912387-19912436 6 10.5 1336 FBgn0036915 320.61 18.75 28.82333333 0.03275007 0.56 0.364288192 -4 -4 -4 0.25 dme-miR-34-5p 8mer-A1 CACTGCCA 3L 19919163 19919170 - 3L_19919163_19919170_- 0.676674237 0.67600294 0.676338589 0.000474681 Su(z)12 FBtr0074916 19918240 19919365 3L - 19919123 19919196 3'utr Su(z)12 FlyBase G38494.2 CAACCGCAACAAAAGCAATAACCATTCACTGCCAGCAACCAGTAACAACGCCAGTAGCAGCAGCAGCAACAGCA 173 19919172 0.999927653 5 171 540 0.979695431 1.586587305 0.020304569 0.10982659 0.218274112 173 0 4 193 3L:19919123-19919196 8 Su(z)12 FBtr0074916 19918240 19919365 CACTGCCA 8mer-A1 dme-miR-34-5p 3L - 19919122 19919195 3'utr Su(z)12 FlyBase G29082.1 AACCGCAACAAAAGCAATAACCATTCACTGCCAGCAACCAGTAACAACGCCAGTAGCAGCAGCAGCAACAGCAA 80 19919172 0.907329834 3 78 240 0.936507937 2.071882007 0 0.3375 0.579365079 80 8 0 118 3L:19919122-19919195 8 123 1337 FBgn0020887 388.31 12.01333333 18.55333333 0.31675723 10.23862375 6.629536471 2 2 2 0.25 dme-miR-965-3p 7mer-m8 TACGCTT 3L 19932238 19932244 + 3L_19932238_19932244_+ 0.619434862 0.620061347 0.619748104 0.000442932 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 3L + 19932217 19932276 3'utr RhoGDI FlyBase G31574.1 CACAACTTACAACATACATCATACGCTTTTTGTTTTCCCTCAAACATGCCTTGTAAATGA 53 19932238 0.839527775 8 49 492 0.9375 1.176091259 0.125 0.20754717 0.34375 53 1 3 60 3L:19932217-19932276 7 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 TACGCTT 7mer-m8 dme-miR-965-3p 3L + 19932211 19932272 3'utr RhoGDI FlyBase G23873.1 ACGACACACAACTTACAACATACATCATACGCTTTTTGTTTTCCCTCAAACATGCCTTGTAA 49 19932245 0.923595682 7 42 441 0.882352941 1.77815125 0.235294118 0.367346939 0.544117647 49 8 0 60 3L:19932211-19932272 7 47.5 1338 FBgn0036921 5639.993333 451.2133333 691.66 0.008421996 0.105271712 0.068675361 0 -7 -3.5 0.25 dme-miR-263a-5p 7mer-m1 TGCCATT 3L 19932569 19932575 + 3L_19932569_19932575_+ 0.759328155 0.749966388 0.754647271 0.006619792 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 3L + 19932425 19932592 3'utr RhoGDI FlyBase G31576.2 AATTGGAATGTGTGCAGATGAAGAGCATTTTTCGCCTAAGTCCTCCTCAATGAGAGTCAAGTCAAAACCAAGTCAAGTCACTAGGCCAGTCAGTCAGTCAGTCAGCCAACCAGTCAGTCAGACAGTCAGTCGTTTGGTTCTTAATGCCATTGCCTATGTTTAACATAC 52 19932569 0.873984594 18 48 345 0.967741935 1.77815125 0.129032258 0.173076923 0.306451613 52 2 0 60 3L:19932425-19932592 7 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 TGCCATT 7mer-m1 dme-miR-263a-5p 3L + 19932387 19932594 3'utr RhoGDI FlyBase G23875.1 TGTAAAGCCATGATAAGTATTTTTGATACCCTATTTGCAATTGGAATGTGTGCAGATGAAGAGCATTTTTCGCCTAAGTCCTCCTCAATGAGAGTCAAGTCAAAACCAAGTCAAGTCACTAGGCCAGTCAGTCAGTCAGTCAGCCAACCAGTCAGTCAGACAGTCAGTCGTTTGGTTCTTAATGCCATTGCCTATGTTTAACATACAT 46 19932569 0.98282691 21 43 325 0.971830986 1.537819095 0.14084507 0.347826087 0.577464789 46 1 1 69 3L:19932387-19932594 7 13.5 1339 FBgn0036921 5639.993333 451.2133333 691.66 0.00239362 0.029919329 0.01951826 0 0 0 0.25 dme-miR-277-3p 7mer-m8 TGCATTT 3L 19932641 19932647 + 3L_19932641_19932647_+ 0.574437905 0.490673503 0.532555704 0.059230375 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 3L + 19932629 19932659 3'utr RhoGDI FlyBase G31577.1 AAGAAAGTTGTTTGCATTTCGCTGTGTATTT 8 19932643 0.620224681 2 8 74 1 1 0.6 0.25 0.4 8 0 0 10 3L:19932629-19932659 7 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 TGCATTT 7mer-m8 dme-miR-277-3p 3L + 19932629 19932658 3'utr RhoGDI FlyBase G23876.1 AAGAAAGTTGTTTGCATTTCGCTGTGTATT 8 19932646 0.66493294 4 8 78 1 1.146128036 0.285714286 0.625 0.785714286 8 0 0 14 3L:19932629-19932658 7 8 1340 FBgn0036921 5639.993333 451.2133333 691.66 0.001418441 0.017729973 0.011566377 -2 -5 -3.5 0.25 dme-miR-33-5p 7mer-A1 AATGCAA 3L 19932884 19932890 + 3L_19932884_19932890_+ 0.721434083 0.754232122 0.737833103 0.023191688 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 3L + 19932817 19932902 3'utr RhoGDI FlyBase G31579.1 ATTATTCTAACTATATATCTCTGTGTATTTTTTGTGTACAACATACCATATATGCGAAAGCTGATTGAATGCAACCGAAGAGCAAT 35 19932882 0.957582578 5 34 169 0.973684211 1.568201724 0.210526316 0.057142857 0.131578947 35 1 0 37 3L:19932817-19932902 7 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 AATGCAA 7mer-A1 dme-miR-33-5p 3L + 19932856 19932905 3'utr RhoGDI FlyBase G23877.1 AACATACCATATATGCGAAAGCTGATTGAATGCAACCGAAGAGCAATAAA 35 19932882 0.663941034 6 33 139 0.983050847 1.763427994 0.152542373 0.5 0.711864407 34 1 0 58 3L:19932856-19932905 7 31.5 1341 FBgn0036921 5639.993333 451.2133333 691.66 0.005585113 0.069811767 0.045542608 2 2 2 0.25 dme-miR-308-3p 8mer-m1 CTGTGATT 3L 19979131 19979138 - 3L_19979131_19979138_- 0.38553971 0.385500048 0.385519879 2.81E-05 CG14182 FBtr0074913|FBtr0346534|FBtr0331802 19978811|19978711|19978811 19979187|19979187|19979187 3L - 19979117 19979187 NoAnnotation G38510.1 AGACGTGACCACGGCATCGCTAGATTCCTCATTTCATTTGCAGTTTGCTCTGTGATTTGTTACATCTTTTG 131 19979139 0.810863064 16 124 1446 0.961783439 1.480006943 0.133757962 0.183206107 0.318471338 131 2 4 151 3L:19979117-19979187 8 CG14182 FBtr0331802|FBtr0346534|FBtr0074913 19978811|19978711|19978811 19979187|19979187|19979187 CTGTGATT 8mer-m1 dme-miR-308-3p 3L - 19979117 19979189 stop_codon CG14182 FlyBase G29094.1 AAAGACGTGACCACGGCATCGCTAGATTCCTCATTTCATTTGCAGTTTGCTCTGTGATTTGTTACATCTTTTG 86 19979131 0.992770266 12 80 925 0.946969697 2.096910013 0.075757576 0.465116279 0.651515152 86 7 0 125 3L:19979117-19979189 8 103.5 1342 FBgn0036922 39 5.416666667 8.226666667 2.653846154 19.10769231 12.58103728 1 -7 -3 0.25 dme-miR-8-3p 7mer-A1 AGTATTA 3L 20150610 20150616 - 3L_20150610_20150616_- 0.807492482 0.820294938 0.81389371 0.009052664 CG42674 FBtr0302712|FBtr0302713|FBtr0302715|FBtr0302714|FBtr0332699|FBtr0302716|FBtr0332698 20149612|20149612|20149612|20149612|20149612|20149612|20149612 20151571|20151571|20151571|20151571|20151571|20151571|20151571 3L - 20150593 20150642 3'utr CG42674 FlyBase G38527.1 ACGAAAAAGTTTGTATACCAATATAGAGTATTAGCCGATCTTCGGTCAAA 50 20150620 0.86578485 7 40 408 0.806451613 1.397940009 0.258064516 0.18 0.338709677 50 11 1 50 3L:20150593-20150642 7 CG42674 FBtr0302714|FBtr0302715|FBtr0302713|FBtr0302712|FBtr0332698|FBtr0302716|FBtr0332699 20149612|20149612|20149612|20149612|20149612|20149612|20149612 20151571|20151571|20151571|20151571|20151571|20151571|20151571 AGTATTA 7mer-A1 dme-miR-8-3p 3L - 20150595 20150635 3'utr CG42674 FlyBase G29102.2 AGTTTGTATACCAATATAGAGTATTAGCCGATCTTCGGTCA 37 20150620 0.893453878 5 21 265 0.633333333 1.278753601 0.2 0.405405405 0.633333333 37 21 1 38 3L:20150595-20150635 7 42.5 1343 FBgn0261556 3405.386667 53.14 81.81333333 0.012480227 0.799774181 0.519475228 4 4 4 0.25 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3L 20268977 20268984 - 3L_20268977_20268984_- 0.555790945 0.531488485 0.543639715 0.017184392 gogo FBtr0074848 20268857 20269444 3L - 20268960 20269031 3'utr gogo FlyBase G38601.1 ATGAAATTTTGTGATCTTCATTTTGTGCTTGTAAGCATTGGAAAAATTCTAGTCAATACATTAGTCAAAATT 36 20268985 0.840256325 7 35 276 0.976744186 1.322219295 0.139534884 0.138888889 0.279069767 36 0 1 42 3L:20268960-20269031 8 gogo FBtr0074848 20268857 20269444 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L - 20268953 20269001 3'utr gogo FlyBase G29151.1 GTAAGCATTGGAAAAATTCTAGTCAATACATTAGTCAAAATTAATTAGC 19 20268985 0.974340804 3 19 128 1 1.491361694 0.096774194 0.473684211 0.677419355 19 0 0 31 3L:20268953-20269001 8 22.5 1344 FBgn0052227 17 0.396666667 0.6 1.323529412 56.72268908 37.5 1 1 1 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3L 20297348 20297353 - 3L_20297348_20297353_- 0.960201597 0.969162702 0.964682149 0.006336455 Pex23 FBtr0074846 20297127 20297459 3L - 20297298 20297421 3'utr Pex23 FlyBase G38605.1 ACGGACGATCCTGTTTGTTGTATTTATTCATATTTACAAGCTTATATGTGACCATGCCAACGCTTTTTCCAAAGTATATGAAAATAAGATGTTTCCTATTTAAGCTATTTGAAACGTATTATTT 62 20297355 0.985104955 14 59 476 0.960526316 1.562292864 0.184210526 0.177419355 0.328947368 62 2 1 73 3L:20297298-20297421 6 Pex23 FBtr0074846 20297127 20297459 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 20297320 20297391 3'utr Pex23 FlyBase G29154.1 TATTTACAAGCTTATATGTGACCATGCCAACGCTTTTTCCAAAGTATATGAAAATAAGATGTTTCCTATTTA 36 20297378 0.980915157 14 32 231 0.842105263 1.681241237 0.105263158 0.444444444 0.649122807 36 9 0 48 3L:20297320-20297391 6 15.5 1345 FBgn0052226 261.2133333 7.016666667 10.72666667 0.059338472 2.209026128 1.444996892 2 25 13.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3L 20308852 20308857 + 3L_20308852_20308857_+ 0.998879897 0.99999219 0.999436043 0.000786515 CG6597 FBtr0074837|FBtr0332775|FBtr0074838|FBtr0344228 20308825|20308825|20308825|20308825 20309194|20309511|20309511|20309194 3L + 20308802 20308927 stop_codon CG6597 FlyBase G31674.2 CACCTCCACAACCGGATCTAGCTGAGAAAAGCTGTATCGAGTCGCCTATTTCTAGTTCAACTTTGGGAGCTCAGTGCGGAGAGGAGTTCGCGGAGACTGAGTCGGAGATGGGATGCGATGCGATGG 27 20308852 0.979593359 12 25 167 0.96875 1.491361694 0.4375 0.111111111 0.25 27 1 0 31 3L:20308802-20308927 6 CG6597 FBtr0074838|FBtr0344228|FBtr0074837|FBtr0332775 20308825|20308825|20308825|20308825 20309511|20309194|20309194|20309511 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 20308839 20308909 5'utr CG6597 FlyBase G23948.1 CGAGTCGCCTATTTCTAGTTCAACTTTGGGAGCTCAGTGCGGAGAGGAGTTCGCGGAGACTGAGTCGGAGA 15 20308852 0.984716353 6 13 104 0.92 1.361727836 0.2 0.466666667 0.68 15 2 0 23 3L:20308839-20308909 6 12.5 1346 FBgn0036967 626.6566667 51.31333333 78.75333333 0.019947127 0.243601403 0.15872344 0 0 0 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 20382257 20382262 + 3L_20382257_20382262_+ 0.997763874 0.999984505 0.99887419 0.001570201 RhoBTB FBtr0078185|FBtr0330157|FBtr0330158 20381697|20381881|20381697 20382398|20382398|20382398 3L + 20382186 20382292 3'utr RhoBTB FlyBase G31744.2 TTGTTCTGCACGATCCCTCCCATGGAATGTGGACAGCCGAAGGACGCAGACATGTGTATATCCATATATTTGTACCTTTACCTAAGACATGTATGTATGTATATTTT 19 20382265 0.893786405 13 18 165 0.954545455 1.021189299 0.181818182 0.157894737 0.272727273 19 0 1 21 3L:20382186-20382292 6 RhoBTB FBtr0330158|FBtr0078185|FBtr0330157 20381697|20381697|20381881 20382398|20382398|20382398 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 20382247 20382284 3'utr RhoBTB FlyBase G24002.1 CCATATATTTGTACCTTTACCTAAGACATGTATGTATG 10 20382263 0.601295405 4 8 89 0.857142857 0.77815125 0.571428571 0.4 0.571428571 10 1 1 12 3L:20382247-20382284 6 10 1347 FBgn0036980 400.9966667 15.65333333 23.82333333 0.024937863 0.638841567 0.419756541 -8 -6 -7 0.25 dme-miR-968-5p 7mer-A1 CTACTTA 3L 20391837 20391843 + 3L_20391837_20391843_+ 0.80474241 0.755584046 0.780163228 0.034760238 fbl FBtr0078189|FBtr0307393|FBtr0078187 20391181|20391181|20391181 20391913|20391913|20391913 3L + 20391786 20391914 3'utr fbl FlyBase G31761.1 TGATGATACAGTTTAAAAACAAGACGGTAATAGCCTTCTCTCTACCTTTGCCTACTTATACAATTATTGTTAAGGTTTGTGTTATTCTAAAAAAATTCCGTAATAAACTAGACACGAGTTGTTCTGATA 32 20391834 0.987834736 12 29 259 0.911111111 1.135662602 0.155555556 0.28125 0.488888889 32 2 2 41 3L:20391786-20391914 7 fbl FBtr0078187|FBtr0307393|FBtr0078189 20391181|20391181|20391181 20391913|20391913|20391913 CTACTTA 7mer-A1 dme-miR-968-5p 3L + 20391797 20391839 3'utr fbl FlyBase G24017.1 TTTAAAAACAAGACGGTAATAGCCTTCTCTCTACCTTTGCCTA 12 20391834 0.986940158 2 11 97 0.941176471 0.903089987 0.058823529 0.25 0.470588235 12 0 1 16 3L:20391797-20391839 3 12.5 1348 FBgn0011205 689.3733333 36.86333333 56.25 0.01813241 0.339090334 0.222222222 3 3 3 0.25 dme-miR-1008-3p 7mer-A1 GCTGTGA 3L 20428169 20428175 - 3L_20428169_20428175_- 0.816154272 0.821832678 0.818993475 0.004015235 CG5262 FBtr0078230|FBtr0310615 20428098|20427960 20428352|20428352 3L - 20428141 20428206 3'utr CG5262 FlyBase G38672.1 ATTTTAGCAACGTAAGTCAGTATTGAAATCGGCTGTGACACAAATTTTCAATATATTTTTTATATA 101 20428184 0.969421902 9 92 650 0.920353982 1.539912085 0.10619469 0.118811881 0.212389381 101 7 2 104 3L:20428141-20428206 7 CG5262 FBtr0078230|FBtr0310615 20428098|20427960 20428352|20428352 GCTGTGA 7mer-A1 dme-miR-1008-3p 3L - 20428151 20428213 3'utr CG5262 FlyBase G29203.1 TAATCGAATTTTAGCAACGTAAGTCAGTATTGAAATCGGCTGTGACACAAATTTTCAATATAT 69 20428182 0.673608042 10 59 430 0.845360825 1.135662602 0.257731959 0.31884058 0.515463918 69 10 5 82 3L:20428151-20428213 7 77 1349 FBgn0036988 148.2966667 9.42 14.41 0.519229472 8.174097665 5.34351145 9 7 8 0.25 dme-miR-970-3p 6mer3-8 TCTTAT 3L 20428343 20428348 - 3L_20428343_20428348_- 0.920525949 0.90152815 0.91102705 0.013433402 CG5262 FBtr0078230|FBtr0310615 20428098|20427960 20428352|20428352 3L - 20428326 20428354 stop_codon CG5262 FlyBase G38673.1 AAGTTATCTTATCTGCCAATGTGGAGATA 5 20428346 0.591025554 4 5 37 1 0.698970004 0 0 0 5 0 0 5 3L:20428326-20428354 6 CG5262 FBtr0078230|FBtr0310615 20428098|20427960 20428352|20428352 TCTTAT 6mer3-8 dme-miR-970-3p 3L - 20428329 20428354 stop_codon CG5262 FlyBase G29205.1 AAGTTATCTTATCTGCCAATGTGGAG 6 20428346 0.683066354 3 5 38 0.6 0.77815125 0 0.333333333 0.6 6 4 0 6 3L:20428329-20428354 6 5 1350 FBgn0036988 148.2966667 9.42 14.41 0.0337162 0.530785563 0.346981263 -2 -2 -2 0.25 dme-miR-252-5p 8mer-m1 GTACTTAG 3L 20450494 20450501 + 3L_20450494_20450501_+ 0.635842466 0.633731616 0.634787041 0.001492632 CG5910 FBtr0300411|FBtr0078195 20450395|20450395 20450580|20450580 3L + 20450459 20450521 3'utr CG5910 FlyBase G31807.1 AAGTAGGATCTAGTCGTAGTAGCATTCAAATAAGTGTACTTAGTTCAACAAATGTCCAGTGGT 7 20450498 0.897652122 5 6 40 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 3L:20450459-20450521 8 CG5910 FBtr0300411|FBtr0078195 20450395|20450395 20450580|20450580 GTACTTAG 8mer-m1 dme-miR-252-5p 3L + 20450455 20450514 3'utr CG5910 FlyBase G24046.1 AGAGAAGTAGGATCTAGTCGTAGTAGCATTCAAATAAGTGTACTTAGTTCAACAAATGTC 7 20450498 0.983702598 5 5 41 0.75 0.77815125 0.375 0.142857143 0.25 7 2 0 6 3L:20450455-20450514 8 3 1351 FBgn0036993 5.333333333 0.613333333 0.916666667 0.5625 4.891304348 3.272727273 -4 -4 -4 0.25 dme-miR-8-3p 6mer2-7 AGTATT 3L 20469711 20469716 - 3L_20469711_20469716_- 0.920386272 0.688658975 0.804522623 0.163855945 CG32428 FBtr0303381 20469672 20469796 3L - 20469700 20469747 3'utr CG32428 FlyBase G38694.1 AAGCTGTCGCAAACTAAAGGTGCTTACCAATAGTATTTGAGTTCGAAT 18 20469710 0.700257765 5 18 119 1 1.380211242 0.416666667 0.166666667 0.375 18 0 0 24 3L:20469700-20469747 6 CG32428 FBtr0303381 20469672 20469796 AGTATT 6mer2-7 dme-miR-8-3p 3L - 20469696 20469747 3'utr CG32428 FlyBase G29214.1 AAGCTGTCGCAAACTAAAGGTGCTTACCAATAGTATTTGAGTTCGAATAAAC 14 20469710 0.687443341 5 13 95 1 1.301029996 0.3 0.285714286 0.5 14 0 0 20 3L:20469696-20469747 6 11.5 1352 FBgn0052428 469.8933333 37.72333333 57.65 0.024473639 0.304851109 0.199479618 -6 -6 -6 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 20470525 20470532 - 3L_20470525_20470532_- 0.415460186 0.421961666 0.418710926 0.004597255 CG32428 FBtr0300452 20470021 20470894 3L - 20470514 20470556 3'utr CG32428 FlyBase G38700.1 TAAGTCGAACATCGAACATAAACTGTACTTAACTACCTAAAGA 170 20470533 0.821063557 3 170 1032 1 2.322219295 0.161904762 0.205882353 0.357142857 170 0 0 210 3L:20470514-20470556 8 CG32428 FBtr0300452 20470021 20470894 GTACTTAA 8mer-A1 dme-miR-252-5p 3L - 20470447 20470555 3'utr CG32428 FlyBase G29219.1 AAGTCGAACATCGAACATAAACTGTACTTAACTACCTAAAGAATTGAAATACGTAATTAATTTCAAAAAGTAATAGTTAGACCTGCGAAACATTGCAATCACAAAAAAG 141 20470533 0.97224245 7 141 838 1 2.274157849 0.143617021 0.29787234 0.473404255 141 0 0 188 3L:20470447-20470555 8 153.5 1353 FBgn0052428 469.8933333 37.72333333 57.65 0.326669883 4.069099585 2.662619254 1 1 1 0.25 dme-bantam-3p 8mer-A1 TGATCTCA 3L 20743899 20743906 + 3L_20743899_20743906_+ 0.631130014 0.631132912 0.631131463 2.05E-06 CG13252 FBtr0078245 20743657 20744508 3L + 20743879 20743927 3'utr CG13252 FlyBase G31851.1 TGCCTTTATTTGTTTGGTATTGATCTCATTTAAACTTTTCACTCTTCAC 98 20743898 0.623514127 15 96 1093 0.983870968 1.785329835 0 0.214285714 0.379032258 98 1 1 122 3L:20743879-20743927 8 CG13252 FBtr0078245 20743657 20744508 TGATCTCA 8mer-A1 dme-bantam-3p 3L + 20743882 20743917 3'utr CG13252 FlyBase G24078.1 CTTTATTTGTTTGGTATTGATCTCATTTAAACTTTT 68 20743898 0.624469351 9 65 742 0.96875 1.491361694 0 0.294117647 0.5 68 1 2 93 3L:20743882-20743917 8 82.5 1354 FBgn0037016 248.3333333 12.01 18.50666667 0.332214765 6.869275604 4.457853026 1 1 1 0.25 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 20768379 20768386 - 3L_20768379_20768386_- 0.6600621 0.661387185 0.660724643 0.000936987 CG4074 FBtr0345811|FBtr0078280 20768205|20768340 20768406|20768406 3L - 20768362 20768405 3'utr CG4074 FlyBase G38739.1 CAAATAAACTTTCCAATATGGCAGCTATTTTATGAACATAAAAG 51 20768388 0.872123206 5 51 442 1 1.799340549 0 0.137254902 0.301587302 51 0 0 63 3L:20768362-20768405 8 CG4074 FBtr0345811|FBtr0078280 20768205|20768340 20768406|20768406 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L - 20768360 20768404 3'utr CG4074 FlyBase G29248.1 AAATAAACTTTCCAATATGGCAGCTATTTTATGAACATAAAAGTT 28 20768387 0.979479987 4 25 256 0.888888889 1.204119983 0 0.285714286 0.444444444 28 3 1 32 3L:20768360-20768404 8 39.5 1355 FBgn0037017 21.33333333 2.336666667 3.576666667 1.8515625 16.90442225 11.04380242 2 1 1.5 0.25 dme-miR-33-5p 6mer2-7 AATGCA 3L 20780944 20780949 - 3L_20780944_20780949_- 0.563092503 0.519005207 0.541048855 0.031174429 CG11399 FBtr0078277 20780348 20781657 3L - 20780872 20781044 3'utr CG11399 FlyBase G38750.2 GAAATAGCTGATAAAAATGCCGGCCTGGCCGCTGTTTATCTTATACGATTGTACCCAACAAACAAGGGCCAAGCTACCCAACAAAAGACTCTAATAATGCATACATAGTATGGGTAGGGGTACTGTTCTCTATCCTTGTTTCAGGGTATTTCGCAATGGTTTGTCCATTCACA 46 20780952 0.963992638 14 44 213 0.962264151 1.707570176 0.169811321 0.130434783 0.245283019 46 2 0 51 3L:20780872-20781044 6 CG11399 FBtr0078277 20780348 20781657 AATGCA 6mer2-7 dme-miR-33-5p 3L - 20780940 20781000 3'utr CG11399 FlyBase G29255.1 ACGATTGTACCCAACAAACAAGGGCCAAGCTACCCAACAAAAGACTCTAATAATGCATACA 18 20780952 0.913435509 5 18 59 1 1.531478917 0.147058824 0.444444444 0.705882353 18 0 0 34 3L:20780940-20781000 6 10 1356 FBgn0037021 631 17.94666667 27.51333333 0.015847861 0.557206538 0.363460141 3 3 3 0.25 dme-miR-980-3p 7mer-m8 GGCAGCT 3L 20781099 20781105 - 3L_20781099_20781105_- 0.645099002 0.635241687 0.640170344 0.006970164 CG11399 FBtr0078277 20780348 20781657 3L - 20781061 20781162 3'utr CG11399 FlyBase G38751.1 ATTTTTGTACTTCTTGTCAAAGCTTTAATTTTCAAACGTACACAGTGCTCGGCCTTTGGCAGCTGGTATTGCCCCCATCGCAAGGTATAATTAATTGTAAAT 138 20781106 0.771048009 16 137 943 0.993975904 2.217483944 0.186746988 0.173913043 0.313253012 138 1 0 165 3L:20781061-20781162 7 CG11399 FBtr0078277 20780348 20781657 GGCAGCT 7mer-m8 dme-miR-980-3p 3L - 20781061 20781126 3'utr CG11399 FlyBase G29256.1 CGTACACAGTGCTCGGCCTTTGGCAGCTGGTATTGCCCCCATCGCAAGGTATAATTAATTGTAAAT 102 20781106 0.773926277 7 102 651 1 2.204119983 0.2625 0.352941176 0.5875 102 0 0 160 3L:20781061-20781126 7 110 1357 FBgn0037021 631 17.94666667 27.51333333 0.174326466 6.129271917 3.998061546 1 1 1 0.25 dme-miR-970-3p 6mer3-8 TCTTAT 3L 20839152 20839157 - 3L_20839152_20839157_- 0.995952242 0.64900012 0.822476181 0.245332183 CSN3 FBtr0078269 20839094 20839324 3L - 20839123 20839182 3'utr CSN3 FlyBase G38790.1 CAGCTACCACAACAACAAACTGCGCTCTTATTGCAAATTTAAAGATGAACATGCTATTTT 12 20839155 0.97654121 4 12 78 1 1.176091259 0 0.166666667 0.333333333 12 0 0 15 3L:20839123-20839182 6 CSN3 FBtr0078269 20839094 20839324 TCTTAT 6mer3-8 dme-miR-970-3p 3L - 20839119 20839174 3'utr CSN3 FlyBase G29289.1 ACAACAACAAACTGCGCTCTTATTGCAAATTTAAAGATGAACATGCTATTTTAAAT 9 20839155 0.976491235 4 9 59 1 1.079181246 0 0.222222222 0.416666667 9 0 0 12 3L:20839119-20839174 6 9.5 1358 FBgn0027055 526.47 38.38666667 58.78666667 0.018044713 0.247481765 0.16160127 -2 -2 -2 0.25 dme-miR-31a-5p 6mer3-8 TCTTGC 3L 20839197 20839202 - 3L_20839197_20839202_- 0.998361761 0.999846051 0.999103906 0.001049559 CSN3 FBtr0078269 20839094 20839324 3L - 20839187 20839266 3'utr CSN3 FlyBase G38791.1 ATCCCCAACACCGTTTACCAGAACTTGTCGAAGCCGCGAGGCCCTGGGCCCGAAAGCTGACGTCTCTTGCAGTCCGTACT 8 20839200 0.964220181 6 8 42 1 0.903089987 0 0 0 8 0 0 8 3L:20839187-20839266 6 CSN3 FBtr0078269 20839094 20839324 TCTTGC 6mer3-8 dme-miR-31a-5p 3L - 20839185 20839237 3'utr CSN3 FlyBase G29290.1 GAAGCCGCGAGGCCCTGGGCCCGAAAGCTGACGTCTCTTGCAGTCCGTACTCA 6 20839209 0.914893565 3 5 19 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 3L:20839185-20839237 6 4 1359 FBgn0027055 526.47 38.38666667 58.78666667 0.007597774 0.104202848 0.06804264 -2 7 2.5 0.25 dme-miR-305-5p 7mer-A1 GTACAAA 3L 20994476 20994482 - 3L_20994476_20994482_- 0.781659656 0.779306228 0.780482942 0.001664176 skd FBtr0078328|FBtr0112830|FBtr0078329|FBtr0333284 20994129|20994129|20992812|20994129 20995703|20995703|20995703|20995703 3L - 20994463 20994526 3'utr skd FlyBase G38807.1 CACATAGCCAATTTTCTAATAATGGAATACTTAAACGAAAATGTGTACAAATTAATAATAACGA 8 20994485 0.982249178 5 7 57 0.888888889 0.602059991 0.333333333 0.125 0.222222222 8 0 1 8 3L:20994463-20994526 7 skd FBtr0078329|FBtr0333284|FBtr0078328|FBtr0112830 20992812|20994129|20994129|20994129 20995703|20995703|20995703|20995703 GTACAAA 7mer-A1 dme-miR-305-5p 3L - 20994465 20994498 3'utr skd FlyBase G29300.1 ACTTAAACGAAAATGTGTACAAATTAATAATAAC 8 20994485 0.958967905 2 8 41 1 1.041392685 0 0.375 0.545454545 8 0 0 11 3L:20994465-20994498 7 6.5 1360 FBgn0003415 2022.95 23.24 35.72666667 0.003213129 0.279690189 0.181936929 3 3 3 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3L 21136876 21136882 - 3L_21136876_21136882_- 0.388118824 0.496025856 0.44207234 0.076301842 Ac78C FBtr0330067|FBtr0301701|FBtr0333358|FBtr0330066|FBtr0305501 21136445|21136445|21136445|21136445|21136445 21137079|21137106|21137106|21137106|21137106 3L - 21136859 21136896 3'utr Ac78C FlyBase G38869.1 TATCTCAGCACAATTCTAGTCGTTAAACTTAAGAACTG 28 21136883 0.862302378 3 27 202 0.96875 1.491361694 0 0.107142857 0.21875 28 1 0 31 3L:21136859-21136896 7 Ac78C FBtr0305501|FBtr0330066|FBtr0333358|FBtr0301701|FBtr0330067 21136445|21136445|21136445|21136445|21136445 21137106|21137106|21137106|21137106|21137079 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3L - 21136861 21136899 3'utr Ac78C FlyBase G29348.1 ATTTATCTCAGCACAATTCTAGTCGTTAAACTTAAGAAC 17 21136883 0.848034139 2 17 130 1 1.414973348 0 0.352941176 0.576923077 17 0 0 26 3L:21136861-21136899 7 22.5 1361 FBgn0024150 386.8566667 7.673333333 11.87 0.058161076 2.932232841 1.895534962 1 1 1 0.25 dme-miR-2b-2-5p 7mer-m8 TTGAAGA 3L 21207651 21207657 + 3L_21207651_21207657_+ 0.426512762 0.53166192 0.479087341 0.074351642 CG10512 FBtr0078299|FBtr0078297|FBtr0078298|FBtr0078300 21207593|21207593|21207593|21207593 21208092|21208092|21208092|21208092 3L + 21207630 21207682 3'utr CG10512 FlyBase G31998.1 AAGCATACCCATTGCCATATGTTGAAGACGCCTCTGCATTTTGATGGACCAAA 40 21207641 0.739765202 12 39 250 0.976744186 1.62324929 0.418604651 0.075 0.139534884 40 1 0 42 3L:21207630-21207682 7 CG10512 FBtr0078300|FBtr0078298|FBtr0078297|FBtr0078299 21207593|21207593|21207593|21207593 21208092|21208092|21208092|21208092 TTGAAGA 7mer-m8 dme-miR-2b-2-5p 3L + 21207630 21207683 3'utr CG10512 FlyBase G24182.1 AAGCATACCCATTGCCATATGTTGAAGACGCCTCTGCATTTTGATGGACCAAAG 24 21207672 0.787194722 6 22 161 0.891891892 1.217483944 0.297297297 0.333333333 0.567567568 24 3 1 33 3L:21207630-21207683 7 28.5 1362 FBgn0037057 268.2233333 18.25666667 27.67 0.106254738 1.56107358 1.029996386 10 -21 -5.5 0.25 dme-miR-283-5p 8mer-m1 TGATATTT 3L 21207717 21207724 + 3L_21207717_21207724_+ 0.476048044 0.470983195 0.47351562 0.003581354 CG10512 FBtr0078299|FBtr0078297|FBtr0078298|FBtr0078300 21207593|21207593|21207593|21207593 21208092|21208092|21208092|21208092 3L + 21207690 21207828 3'utr CG10512 FlyBase G31999.1 AGTAACACTTTACACTGAGAGAAATATTGATATTTGCAACAGTTAGATTAGATTGCACTGGTGCTGAACTAAAGCTAGTTACATATCTCCATGTTGCACTTAAAACATATTTCTAGTCTCCTAAGAGTCTGTCGTTGCT 339 21207716 0.75351299 38 296 2568 0.883663366 1.950608225 0.222772277 0.16519174 0.29950495 339 44 3 357 3L:21207690-21207828 8 CG10512 FBtr0078300|FBtr0078298|FBtr0078297|FBtr0078299 21207593|21207593|21207593|21207593 21208092|21208092|21208092|21208092 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 21207690 21207830 3'utr CG10512 FlyBase G24183.1 AGTAACACTTTACACTGAGAGAAATATTGATATTTGCAACAGTTAGATTAGATTGCACTGGTGCTGAACTAAAGCTAGTTACATATCTCCATGTTGCACTTAAAACATATTTCTAGTCTCCTAAGAGTCTGTCGTTGCTCC 174 21207716 0.755643385 25 154 1326 0.882142857 2.392696953 0.210714286 0.454022989 0.660714286 174 33 0 247 3L:21207690-21207830 8 141.5 1363 FBgn0037057 268.2233333 18.25666667 27.67 0.527545453 7.750593391 5.113841706 1 1 1 0.25 dme-miR-307a-3p 7mer-A1 GTTGTGA 3L 21271302 21271308 - 3L_21271302_21271308_- 0.810278391 0.810253685 0.810266038 1.75E-05 AcCoAS FBtr0333126|FBtr0078413|FBtr0078414 21271207|21270720|21271207 21271704|21271704|21271704 3L - 21271274 21271342 3'utr AcCoAS FlyBase G38885.1 TCGTTGTAGTCGTAGTTTAAGTTCTCGCTAATTCGTTGTGATACAAATTTAATTATATCTTACTTATGT 255 21271309 0.736483011 18 230 2338 0.903846154 1.274157849 0.480769231 0.173228346 0.326923077 254 16 14 282 3L:21271274-21271342 7 AcCoAS FBtr0078413|FBtr0078414|FBtr0333126 21270720|21271207|21271207 21271704|21271704|21271704 GTTGTGA 7mer-A1 dme-miR-307a-3p 3L - 21271270 21271341 3'utr AcCoAS FlyBase G29358.1 CGTTGTAGTCGTAGTTTAAGTTCTCGCTAATTCGTTGTGATACAAATTTAATTATATCTTACTTATGTATGT 154 21271308 0.691948948 16 136 1388 0.887029289 1.627365857 0.464435146 0.376623377 0.59832636 154 23 4 212 3L:21271270-21271341 7 191.5 1364 FBgn0012034 1039.716667 45.38666667 69.30333333 0.184184794 4.219300823 2.763214853 1 0 0.5 0.25 dme-miR-1012-3p 6mer3-8 TTGACT 3L 21280652 21280657 - 3L_21280652_21280657_- 0.99992044 0.998218576 0.999069508 0.001203354 ppl FBtr0078412 21280489 21280688 3L - 21280624 21280742 stop_codon ppl FlyBase G38901.1 CTTATGACCGAGGATCAGTACAAAGCCTTCCTGAGCAGCAGTGGGGATCACTAGAACCAGCAGCTAATCCTAACCCTAAAGCATCTTGACTGTAGCCTTTAAAACGAGTAATTGTTAGC 33 21280650 0.971040779 9 31 183 0.918918919 1.054357662 0.054054054 0.090909091 0.189189189 33 1 2 34 3L:21280624-21280742 6 ppl FBtr0078412 21280489 21280688 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 21280638 21280670 3'utr ppl FlyBase G29373.1 ACCCTAAAGCATCTTGACTGTAGCCTTTAAAAC 15 21280656 0.634234328 3 15 92 1 1.380211242 0 0.466666667 0.666666667 15 0 0 24 3L:21280638-21280670 6 17 1365 FBgn0027945 285 39.5 59.95666667 0.059649123 0.430379747 0.283538111 -7 -1 -4 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 21302523 21302528 - 3L_21302523_21302528_- 0.410107072 0.656272363 0.533189717 0.174065153 CG11309 FBtr0078407|FBtr0078407|FBtr0078407|FBtr0331798|FBtr0331798|FBtr0331798|FBtr0321283|FBtr0321283|FBtr0321283|FBtr0321282|FBtr0321282|FBtr0321282|FBtr0345883|FBtr0345883|FBtr0345883|FBtr0078406|FBtr0078406|FBtr0078406 21302274|21302274|21302274|21302478|21302478|21302478|21302274|21302274|21302274|21302478|21302478|21302478|21301783|21301783|21301783|21302478|21302478|21302478 21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604 3L - 21302497 21302563 3'utr CG11309 FlyBase G38905.1 ATTGTACAGGTTTTTATACTTAATTGTTTATGCTATGTGATCGCGGCAGAGGACTCGGCTCTGCTAT 16 21302550 0.81657032 10 14 139 0.842105263 1.204119983 0.210526316 0.1875 0.315789474 16 3 0 16 3L:21302497-21302563 6 CG11309 FBtr0321282|FBtr0321282|FBtr0321282|FBtr0321283|FBtr0321283|FBtr0321283|FBtr0331798|FBtr0331798|FBtr0331798|FBtr0078407|FBtr0078407|FBtr0078407|FBtr0078406|FBtr0078406|FBtr0078406|FBtr0345883|FBtr0345883|FBtr0345883 21302478|21302478|21302478|21302274|21302274|21302274|21302478|21302478|21302478|21302274|21302274|21302274|21302478|21302478|21302478|21301783|21301783|21301783 21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604|21302604 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 21302512 21302550 3'utr CG11309 FlyBase G29377.1 TTATACTTAATTGTTTATGCTATGTGATCGCGGCAGAGG 8 21302534 0.980490356 5 7 58 0.9 1.255272505 0.8 0.625 0.85 8 2 0 18 3L:21302512-21302550 6 8.5 1366 FBgn0037070 162.24 12.80666667 19.53 0.052391519 0.663716814 0.435227855 22 6 14 0.25 dme-miR-965-3p 8mer-A1 TACGCTTA 3L 21315830 21315837 - 3L_21315830_21315837_- 0.446306174 0.449357326 0.44783175 0.002157454 Pc FBtr0078405 21306136 21316423 3L - 21315800 21315873 5'utr Pc FlyBase G38913.1 AAGAAAACTCCATGCGAAACCGAAGCAATTGTTGATTACGCTTACAAATATATACAATAGAAGATGCATATATT 37 21315838 0.984513143 5 36 284 0.977777778 1.643452676 0.244444444 0.189189189 0.333333333 37 1 0 44 3L:21315800-21315873 8 Pc FBtr0078405 21306136 21316423 TACGCTTA 8mer-A1 dme-miR-965-3p 3L - 21315810 21315860 5'utr Pc FlyBase G29383.1 GCGAAACCGAAGCAATTGTTGATTACGCTTACAAATATATACAATAGAAGA 20 21315838 0.984584544 2 20 166 1 1.505149978 0.3125 0.3 0.5625 20 0 0 32 3L:21315810-21315860 8 27 1367 FBgn0003042 426.7466667 21.12 32.45666667 0.063269387 1.278409091 0.831878402 1 1 1 0.25 dme-miR-965-3p 8mer-A1 TACGCTTA 3L 21436804 21436811 + 3L_21436804_21436811_+ 0.610783674 0.615451144 0.613117409 0.00330035 Aef1 FBtr0330156|FBtr0078348|FBtr0078350|FBtr0078349 21436646|21436208|21436208|21436208 21437491|21438639|21437491|21437491 3L + 21436763 21436827 3'utr Aef1 FlyBase G32068.1 AGGAGCAGCGATCGAGCCAGAAGTGAGCCATGTTTGGTGTGTACGCTTACGTTGTTGTTAGTTGT 11 21436803 0.99120693 4 10 108 1 1.079181246 0.25 0.090909091 0.166666667 11 0 0 12 3L:21436763-21436827 8 Aef1 FBtr0330156|FBtr0078348|FBtr0078350|FBtr0078349 21436646|21436208|21436208|21436208 21437491|21438639|21437491|21437491 TACGCTTA 8mer-A1 dme-miR-965-3p 3L + 21436741 21436827 3'utr Aef1 FlyBase G24241.1 GTGGAAATTCAGGAGCAGAAAGAGGAGCAGCGATCGAGCCAGAAGTGAGCCATGTTTGGTGTGTACGCTTACGTTGTTGTTAGTTGT 10 21436786 0.99966469 6 9 63 0.909090909 0.698970004 0.454545455 0.1 0.181818182 10 0 1 10 3L:21436741-21436827 8 6.5 1368 FBgn0005694 574.74 23.47666667 36.08 0.011309462 0.276870652 0.180155211 1 18 9.5 0.25 dme-miR-988-3p 6mer2-7 CAAGGG 3L 21437378 21437383 + 3L_21437378_21437383_+ 0.998886262 0.998175285 0.998530774 0.000502753 Aef1 FBtr0330156|FBtr0078348|FBtr0078350|FBtr0078349 21436646|21436208|21436208|21436208 21437491|21438639|21437491|21437491 3L + 21437338 21437410 3'utr Aef1 FlyBase G32070.1 GTTGTACAACTCAAAGTTGGTGACGTTTTTCGCCATCTTGCAAGGGCGTGTTTTAGTCTGGGCTAACACAAAT 15 21437376 0.982115308 7 14 106 1 1.230448921 0.352941176 0.133333333 0.235294118 15 0 0 17 3L:21437338-21437410 6 Aef1 FBtr0330156|FBtr0078348|FBtr0078350|FBtr0078349 21436646|21436208|21436208|21436208 21437491|21438639|21437491|21437491 CAAGGG 6mer2-7 dme-miR-988-3p 3L + 21437342 21437422 3'utr Aef1 FlyBase G24243.1 TACAACTCAAAGTTGGTGACGTTTTTCGCCATCTTGCAAGGGCGTGTTTTAGTCTGGGCTAACACAAATACAATTTGTTTA 17 21437376 0.959326012 7 17 112 1 1.491361694 0.483870968 0.411764706 0.677419355 17 0 0 31 3L:21437342-21437422 6 11.5 1369 FBgn0005694 574.74 23.47666667 36.08 0.020009048 0.489848076 0.318736142 2 2 2 0.25 dme-miR-305-5p 7mer-A1 GTACAAA 3L 21437764 21437770 + 3L_21437764_21437770_+ 0.74604665 0.772074752 0.759060701 0.018404717 Aef1 FBtr0078348 21436208 21438639 3L + 21437747 21437806 3'utr Aef1 FlyBase G32073.1 GTAAAGCAACAAGTTCTGTACAAAGCCCAACTCCAATTTGTATGTATAAAGCGAAAGCGA 8 21437761 0.940178436 5 8 35 1 0.903089987 0 0 0 8 0 0 8 3L:21437747-21437806 7 Aef1 FBtr0078348 21436208 21438639 GTACAAA 7mer-A1 dme-miR-305-5p 3L + 21437751 21437786 3'utr Aef1 FlyBase G24245.1 AGCAACAAGTTCTGTACAAAGCCCAACTCCAATTTG 6 21437762 0.758988063 4 5 23 0.857142857 0.77815125 0.142857143 0.166666667 0.285714286 6 1 0 6 3L:21437751-21437786 7 6 1370 FBgn0005694 574.74 23.47666667 36.08 0.010439503 0.255572909 0.166297118 3 2 2.5 0.25 dme-miR-1007-3p 6mer3-8 TGAGCT 3L 21438978 21438983 - 3L_21438978_21438983_- 0.822443491 0.915643376 0.869043433 0.065902281 CG5664 FBtr0331822 21438626 21439731 3L - 21438965 21439002 3'utr CG5664 FlyBase G38953.2 ACCTATCTGAACAACTTTCTGAGCTATGAAGAGTCCAT 8 21438983 0.771730533 2 7 50 0.888888889 0.602059991 0.111111111 0.125 0.222222222 8 0 1 8 3L:21438965-21439002 6 CG5664 FBtr0331822 21438626 21439731 TGAGCT 6mer3-8 dme-miR-1007-3p 3L - 21438935 21439002 3'utr CG5664 FlyBase G29421.1 ACCTATCTGAACAACTTTCTGAGCTATGAAGAGTCCATGTCTCCAGTAGACTCTGCGTCTTCCTCCTT 7 21438983 0.979021754 3 7 56 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3L:21438935-21439002 6 6.5 1371 FBgn0037082 240.3466667 11.07666667 16.92666667 0.027044269 0.586819139 0.384009453 0 0 0 0.25 dme-miR-282-5p 6mer2-7 GAGGCT 3L 21439311 21439316 - 3L_21439311_21439316_- 0.999989485 0.993567414 0.99677845 0.00454111 CG5664 FBtr0331822 21438626 21439731 3L - 21439292 21439388 3'utr CG5664 FlyBase G38954.1 AGTTGTCGCGTGAGGATTACCTAGCATTACTCCTTAGCGCCTTAAAAGACTATGACAAGTGGTTAAATCTTGGAGGCTTTTGGAAGTACCTAATGAG 16 21439318 0.987719868 7 15 129 0.952380952 1.301029996 0.285714286 0.3125 0.476190476 16 1 0 20 3L:21439292-21439388 6 CG5664 FBtr0331822 21438626 21439731 GAGGCT 6mer2-7 dme-miR-282-5p 3L - 21439300 21439332 3'utr CG5664 FlyBase G29422.1 AAGTGGTTAAATCTTGGAGGCTTTTGGAAGTAC 7 21439318 0.770065742 3 7 61 1 1.079181246 0.083333333 0.428571429 0.666666667 7 0 0 12 3L:21439300-21439332 6 9 1372 FBgn0037082 240.3466667 11.07666667 16.92666667 0.037445911 0.812518808 0.531705396 2 2 2 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3L 21439663 21439670 - 3L_21439663_21439670_- 0.645414521 0.634190665 0.639802593 0.007936425 CG5664 FBtr0331822|FBtr0331822|FBtr0331822 21438626|21438626|21438626 21439731|21439731|21439731 3L - 21439608 21439685 3'utr CG5664 FlyBase G38955.1 AGTACGAGGATAATGCTGTGATATATCCTAGTATGGGACCCCAAACCCATCTGCTCATCGAAGACTTCTTCAAGATTT 17 21439672 0.980565538 8 16 114 0.947368421 1.255272505 0.263157895 0.117647059 0.210526316 17 1 0 18 3L:21439608-21439685 8 CG5664 FBtr0331822|FBtr0331822|FBtr0331822 21438626|21438626|21438626 21439731|21439731|21439731 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 21439646 21439690 3'utr CG5664 FlyBase G29423.1 GCTAAAGTACGAGGATAATGCTGTGATATATCCTAGTATGGGACC 10 21439673 0.986967979 3 8 73 0.8 1.079181246 0.4 0.3 0.533333333 10 3 0 12 3L:21439646-21439690 8 11.5 1373 FBgn0037082 240.3466667 11.07666667 16.92666667 0.047847554 1.038218477 0.679401339 2 3 2.5 0.25 dme-miR-307a-3p 7mer-A1 GTTGTGA 3L 21447696 21447702 + 3L_21447696_21447702_+ 0.819520384 0.751155614 0.785337999 0.048341214 Syx7 FBtr0078351|FBtr0078352 21447650|21447650 21448128|21448128 3L + 21447645 21447719 stop_codon Syx7 FlyBase G32078.1 GAATTAGAGCCTTCCGGCATCTCCGAATGATTCAAACCAAACTAGTAAATTGTTGTGAAAAGACAAGAGTTGCCG 9 21447695 0.977275824 7 8 53 0.818181818 0.954242509 0.181818182 0.222222222 0.363636364 9 2 0 9 3L:21447645-21447719 7 Syx7 FBtr0078351|FBtr0078352 21447650|21447650 21448128|21448128 GTTGTGA 7mer-A1 dme-miR-307a-3p 3L + 21447669 21447720 3'utr Syx7 FlyBase G24253.1 GAATGATTCAAACCAAACTAGTAAATTGTTGTGAAAAGACAAGAGTTGCCGC 11 21447696 0.971281813 5 9 55 0.944444444 1.230448921 0.055555556 0.636363636 0.777777778 11 1 0 17 3L:21447669-21447720 7 8 1374 FBgn0086377 809 63.10333333 96.81333333 0.009888752 0.126776187 0.082633246 1 0 0.5 0.25 dme-miR-305-5p 8mer-A1 AGTACAAA 3L 21497809 21497816 - 3L_21497809_21497816_- 0.577849671 0.561829384 0.569839527 0.011328063 Glg1 FBtr0078388|FBtr0332717 21497547|21497547 21498214|21498214 3L - 21497801 21497838 3'utr Glg1 FlyBase G38971.1 TACGGCAGAGCGCCTAGTTTTGAGTACAAAAGTTAAGT 40 21497819 0.944767221 5 40 264 1 1.643452676 0.25 0.1 0.181818182 40 0 0 44 3L:21497801-21497838 8 Glg1 FBtr0078388|FBtr0332717 21497547|21497547 21498214|21498214 AGTACAAA 8mer-A1 dme-miR-305-5p 3L - 21497805 21497837 3'utr Glg1 FlyBase G29436.1 ACGGCAGAGCGCCTAGTTTTGAGTACAAAAGTT 12 21497819 0.961536889 3 12 80 1 1.278753601 0.210526316 0.5 0.684210526 12 0 0 19 3L:21497805-21497837 8 26 1375 FBgn0264561 1367.6 37.22 56.66666667 0.019011407 0.698549167 0.458823529 3 3 3 0.25 dme-miR-14-3p 6mer2-7 AGACTG 3L 21498199 21498204 - 3L_21498199_21498204_- 0.644227293 0.902183395 0.773205344 0.182402508 Glg1 FBtr0078388|FBtr0332717 21497547|21497547 21498214|21498214 3L - 21498137 21498276 stop_codon Glg1 FlyBase G38974.1 TCCTCACCGGCATCTTCCTGGGACGGGCCACCAAACGGGCAATGGGCTTAAAGAATAAATAATTGAAATATTAGACTGTAGTGGCACTGTGTAGGCGGAGTGTGCATGTTTGTGAGCTTGCTGATTTCCATTTCGGCCCA 546 21498206 0.989258442 20 532 3875 0.968553459 1.886490725 0.11163522 0.137362637 0.259433962 546 13 7 616 3L:21498137-21498276 6 Glg1 FBtr0078388|FBtr0332717 21497547|21497547 21498214|21498214 AGACTG 6mer2-7 dme-miR-14-3p 3L - 21498151 21498257 stop_codon Glg1 FlyBase G29439.1 GGGACGGGCCACCAAACGGGCAATGGGCTTAAAGAATAAATAATTGAAATATTAGACTGTAGTGGCACTGTGTAGGCGGAGTGTGCATGTTTGTGAGCTTGCTGATT 269 21498206 0.980399184 12 249 1763 0.941860465 1.653212514 0.11627907 0.423791822 0.639534884 269 17 8 405 3L:21498151-21498257 6 356.5 1376 FBgn0264561 1367.6 37.22 56.66666667 0.260675636 9.578183772 6.291176471 2 2 2 0.25 dme-miR-305-3p 7mer-m8 ATGTGCC 3L 21511831 21511837 + 3L_21511831_21511837_+ 0.634983004 0.651384455 0.64318373 0.011597612 M6 FBtr0339793 21511707 21512749 3L + 21511781 21511865 3'utr M6 FlyBase G32087.1 TGGCCACTCTGTCCACCCTTTTGGTGCTGCTCAGTCTGGTCCACTACCTGATGTGCCTGTCTGCTAACTACGCCCACATTCGGGA 23 21511832 0.985853263 5 22 171 0.961538462 1.397940009 0.269230769 0.086956522 0.192307692 23 1 0 25 3L:21511781-21511865 7 M6 FBtr0339793 21511707 21512749 ATGTGCC 7mer-m8 dme-miR-305-3p 3L + 21511808 21511847 3'utr M6 FlyBase G24260.1 TGCTCAGTCTGGTCCACTACCTGATGTGCCTGTCTGCTAA 7 21511832 0.811613588 2 7 59 1 1.113943352 0 0.857142857 0.923076923 7 0 0 13 3L:21511808-21511847 7 12.5 1377 FBgn0037092 152.03 9.373333333 14.24333333 0.082220614 1.333570413 0.877603557 -1 -1 -1 0.25 dme-miR-184-3p 8mer-A1 TCCGTCCA 3L 21512254 21512261 + 3L_21512254_21512261_+ 0.497828969 0.493250478 0.495539723 0.003237488 M6 FBtr0332712|FBtr0332713|FBtr0078356|FBtr0332714|FBtr0332715|FBtr0339793 21511946|21511946|21511946|21511946|21511946|21511707 21512749|21512749|21512749|21512749|21512749|21512749 3L + 21512185 21512287 3'utr M6 FlyBase G32088.1 ACTGCCAAATCAAATGTTACACTGAAATTATGCTTCTTATCTACTGTACTGTTCCACTGACTTTTTTCTTCCGTCCATTGACTTAAGTTAGTTTACATTTATT 988 21512253 0.845403067 29 968 12105 0.98245614 2.572096768 0.129824561 0.126518219 0.242982456 988 18 2 1120 3L:21512185-21512287 8 M6 FBtr0332712|FBtr0332713|FBtr0332715|FBtr0339793|FBtr0078356|FBtr0332714 21511946|21511946|21511946|21511707|21511946|21511946 21512749|21512749|21512749|21512749|21512749|21512749 TCCGTCCA 8mer-A1 dme-miR-184-3p 3L + 21512186 21512287 3'utr M6 FlyBase G24263.1 CTGCCAAATCAAATGTTACACTGAAATTATGCTTCTTATCTACTGTACTGTTCCACTGACTTTTTTCTTCCGTCCATTGACTTAAGTTAGTTTACATTTATT 598 21512253 0.770483091 25 572 7045 0.958810069 2.321184027 0.129290618 0.352842809 0.557208238 598 33 3 838 3L:21512186-21512287 8 761 1378 FBgn0037092 152.03 9.373333333 14.24333333 5.005591002 81.18776671 53.42850456 1 1 1 0.25 dme-miR-14-3p 7mer-A1 AGACTGA 3L 21531075 21531081 - 3L_21531075_21531081_- 0.819112515 0.822903975 0.821008245 0.002680995 Mkrn1 FBtr0305331|FBtr0078384|FBtr0078383 21530604|21530604|21529957 21531468|21531468|21531468 3L - 21531056 21531116 3'utr Mkrn1 FlyBase G39021.1 ATTTTCAAAACTGGTGACTGTAAATTATGGCTTTCAGACTGAATTGTAAAGATAAAAATGC 102 21531084 0.707398048 9 99 751 0.976 1.785329835 0.04 0.18627451 0.336 102 2 1 122 3L:21531056-21531116 7 Mkrn1 FBtr0078383|FBtr0078384|FBtr0305331 21529957|21530604|21530604 21531468|21531468|21531468 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 21531059 21531110 3'utr Mkrn1 FlyBase G29466.1 AAAACTGGTGACTGTAAATTATGGCTTTCAGACTGAATTGTAAAGATAAAAA 87 21531084 0.636788534 11 84 633 0.947826087 1.736396502 0.07826087 0.252873563 0.434782609 87 5 1 109 3L:21531059-21531110 7 89 1379 FBgn0029152 1179.853333 63.02 97.17333333 0.075433105 1.412250079 0.915889133 3 3 3 0.25 dme-miR-2b-2-5p 6mer2-7 TGAAGA 3L 21540649 21540654 + 3L_21540649_21540654_+ 0.999926631 0.686927766 0.843427199 0.221323574 VhaM9.7-b FBtr0078369|FBtr0333454 21540394|21540394 21540698|21541215 3L + 21540633 21540664 3'utr VhaM9.7-b FlyBase G32143.1 ATCGAGTGTCTTAAAATGAAGATTGAAACCTA 5 21540643 0.634010009 4 4 33 0.8 0.602059991 0.2 0 0 5 1 0 4 3L:21540633-21540664 6 VhaM9.7-b FBtr0333454|FBtr0078369 21540394|21540394 21541215|21540698 TGAAGA 6mer2-7 dme-miR-2b-2-5p 3L + 21540636 21540670 3'utr VhaM9.7-b FlyBase G24306.1 GAGTGTCTTAAAATGAAGATTGAAACCTAAAATAA 5 21540649 0.821549564 2 4 31 0.8 0.602059991 0 0 0 5 1 0 4 3L:21540636-21540670 6 5 1380 FBgn0028663 439.5 80.42 122.6266667 0.011376564 0.062173589 0.040774165 6 0 3 0.25 dme-miR-11-3p 8mer-m1 CTGTGATG 3L 216363 216370 + 3L_216363_216370_+ 0.4622042 0.461889307 0.462046753 0.000222668 CG16940 FBtr0072486|FBtr0072487 216108|216108 216479|216479 3L + 216317 216385 3'utr CG16940 FlyBase G26717.1 TGAACCACATTGTGGGTCCGAGCTTTATGCTTGACAAAAATTGACTCTGTGATGCTTCCTTTTTCGGTT 25 216362 0.890948911 9 21 195 0.903225806 1.447158031 0.129032258 0.24 0.387096774 25 3 0 28 3L:216317-216385 8 CG16940 FBtr0072487|FBtr0072486 216108|216108 216479|216479 CTGTGATG 8mer-m1 dme-miR-11-3p 3L + 216320 216391 3'utr CG16940 FlyBase G20203.1 ACCACATTGTGGGTCCGAGCTTTATGCTTGACAAAAATTGACTCTGTGATGCTTCCTTTTTCGGTTTGCATA 28 216361 0.968264553 12 27 221 1 1.591064607 0.102564103 0.333333333 0.538461538 27 0 0 39 3L:216320-216391 8 21 1381 FBgn0035111 907.85 30.83666667 47.24666667 0.023131575 0.681007459 0.444475801 1 2 1.5 0.25 dme-miR-283-5p 7mer-m8 TGATATT 3L 21642236 21642242 + 3L_21642236_21642242_+ 0.599200066 0.612782271 0.605991169 0.009604066 Atox1 FBtr0330117|FBtr0078426 21642160|21642106 21642599|21642599 3L + 21642193 21642282 3'utr Atox1 FlyBase G32188.1 CACGTTGCCGCTCCGAAAGCATTCGATTTGGGTCGCTGTTCAGTGATATTCATGGGATACATACAAATTTTACTCTTAACCAAATCAAAT 61 21642232 0.680270866 17 56 502 0.918918919 1.531478917 0.175675676 0.180327869 0.324324324 61 5 1 68 3L:21642193-21642282 7 Atox1 FBtr0078426|FBtr0330117 21642106|21642160 21642599|21642599 TGATATT 7mer-m8 dme-miR-283-5p 3L + 21642198 21642274 3'utr Atox1 FlyBase G24336.1 TGCCGCTCCGAAAGCATTCGATTTGGGTCGCTGTTCAGTGATATTCATGGGATACATACAAATTTTACTCTTAACCA 55 21642232 0.988571323 10 50 457 0.903614458 1.273001272 0.120481928 0.363636364 0.578313253 55 5 3 75 3L:21642198-21642274 7 45.5 1382 FBgn0052446 139.3333333 19.38666667 29.60666667 0.326555024 2.346973865 1.536816032 4 4 4 0.25 dme-miR-1012-3p 7mer-A1 TGACTAA 3L 21642532 21642538 + 3L_21642532_21642538_+ 0.541641574 0.512817087 0.52722933 0.020381999 Atox1 FBtr0330117|FBtr0078426 21642160|21642106 21642599|21642599 3L + 21642485 21642542 3'utr Atox1 FlyBase G32190.1 AATCCAACGTAGTTGCCAATAAATGATATACGCCAGTTGCCCTCTTATGACTAATCGT 12 21642522 0.990173395 4 9 88 0.6875 0.740362689 0.125 0.25 0.4375 12 4 1 11 3L:21642485-21642542 7 Atox1 FBtr0078426|FBtr0330117 21642106|21642160 21642599|21642599 TGACTAA 7mer-A1 dme-miR-1012-3p 3L + 21642496 21642552 3'utr Atox1 FlyBase G24338.1 GTTGCCAATAAATGATATACGCCAGTTGCCCTCTTATGACTAATCGTAATATTACAA 12 21642522 0.98295292 5 10 83 0.904761905 1.278753601 0.285714286 0.583333333 0.761904762 12 2 0 19 3L:21642496-21642552 7 8.5 1383 FBgn0052446 139.3333333 19.38666667 29.60666667 0.061004785 0.438445667 0.287097501 10 10 10 0.25 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 21683107 21683113 + 3L_21683107_21683113_+ 0.641967684 0.646239359 0.644103521 0.003020548 CG11248 FBtr0078430|FBtr0333967|FBtr0078431 21682915|21682915|21682915 21683231|21683231|21683231 3L + 21683060 21683127 3'utr CG11248 FlyBase G32194.1 AGATCCAACTTAGTTCAATTTATATAAATATTTATTTTGTTGTCTTTTGTGTTCGTTATCTTTATTTA 19 21683106 0.879119069 2 19 281 1 1.380211242 0 0.157894737 0.333333333 19 0 0 24 3L:21683060-21683127 7 CG11248 FBtr0078431|FBtr0333967|FBtr0078430 21682915|21682915|21682915 21683231|21683231|21683231 TGTGTTC 7mer-m8 dme-miR-317-3p 3L + 21683093 21683126 3'utr CG11248 FlyBase G24341.1 ATTTTGTTGTCTTTTGTGTTCGTTATCTTTATTT 11 21683106 0.729967988 2 11 156 1 1.204119983 0 0.272727273 0.5 11 0 0 16 3L:21683093-21683126 7 13.5 1384 FBgn0037117 323.0366667 13.05333333 20.00333333 0.041790922 1.03421859 0.674887519 1 1 1 0.25 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA 3L 21724674 21724681 - 3L_21724674_21724681_- 0.626720443 0.437266113 0.531993278 0.13396442 CG11247 FBtr0113184|FBtr0078459|FBtr0078458|FBtr0332769 21724324|21724324|21724324|21724324 21724898|21724898|21724898|21724898 3L - 21724656 21724712 3'utr CG11247 FlyBase G39103.1 TCCCAATTTTGCTGCTACCAAAAAGTATAATTTGAAGAATGTATGAGTTAGTGTTGT 8 21724682 0.977485402 7 8 54 1 1 0.1 0.125 0.3 8 0 0 10 3L:21724656-21724712 8 CG11247 FBtr0332769|FBtr0078458|FBtr0078459|FBtr0113184 21724324|21724324|21724324|21724324 21724898|21724898|21724898|21724898 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p 3L - 21724659 21724721 3'utr CG11247 FlyBase G29527.1 TACCCTTAATCCCAATTTTGCTGCTACCAAAAAGTATAATTTGAAGAATGTATGAGTTAGTGT 7 21724704 0.96920563 4 7 48 1 1.041392685 0.272727273 0.285714286 0.545454545 7 0 0 11 3L:21724659-21724721 8 3 1385 FBgn0037120 533.7966667 23.84666667 36.66 0.005620118 0.125803746 0.081833061 1 23 12 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 21824146 21824151 + 3L_21824146_21824151_+ 0.954180206 0.937424416 0.945802311 0.01184814 CG7407 FBtr0078440|FBtr0078440|FBtr0078440 21824099|21824099|21824099 21824571|21824571|21824571 3L + 21824034 21824244 stop_codon CG7407 FlyBase G32205.1 GGAATTGAACCTCCAGGACCGAATAAGCGACCAGGATCTCAAGCAGCAGGTGCGGCTCTATCGCTGAAGTGGCGCCGAGCCTGGGCTCACCCTACCTGAATGTACAGACTTGTGTGATCTATTAGTTTAATGTTTAAAATTCCAAGATTTGGTGTTGCCTCATACGGTCCACTAAGTGCGGGCAAGTCTTTAGTCAGAGAGCTATCTCATC 258 21824145 0.999997264 26 248 2332 0.963815789 1.767897616 0.217105263 0.158914729 0.286184211 258 7 4 293 3L:21824034-21824244 6 CG7407 FBtr0078440|FBtr0078440|FBtr0078440 21824099|21824099|21824099 21824571|21824571|21824571 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 21824037 21824169 stop_codon CG7407 FlyBase G24348.1 ATTGAACCTCCAGGACCGAATAAGCGACCAGGATCTCAAGCAGCAGGTGCGGCTCTATCGCTGAAGTGGCGCCGAGCCTGGGCTCACCCTACCTGAATGTACAGACTTGTGTGATCTATTAGTTTAATGTTTA 129 21824145 0.988546648 16 121 1145 0.938547486 1.924279286 0.173184358 0.286821705 0.48603352 129 10 1 168 3L:21824037-21824169 6 139.5 1386 FBgn0037134 80.66666667 9.62 14.74333333 1.729338843 14.5010395 9.461903685 1 1 1 0.25 dme-miR-263a-5p 7mer-m1 TGCCATT 3L 21827008 21827014 + 3L_21827008_21827014_+ 0.731482554 0.76558567 0.748534112 0.024114533 CG7414 FBtr0303247|FBtr0303245 21826936|21826936 21827856|21827856 3L + 21826956 21827031 3'utr CG7414 FlyBase G32220.1 TTGTCAGCTCCTAGGCTCCACTCACCTCTTTCACACACATTTTGTATTAGCATGCCATTAGGATTAGGGATTGCGC 23 21827013 0.985561845 11 21 171 0.923076923 1.079181246 0.192307692 0.086956522 0.192307692 23 1 1 24 3L:21826956-21827031 7 CG7414 FBtr0303247|FBtr0303245 21826936|21826936 21827856|21827856 TGCCATT 7mer-m1 dme-miR-263a-5p 3L + 21826983 21827025 3'utr CG7414 FlyBase G24361.1 CTTTCACACACATTTTGTATTAGCATGCCATTAGGATTAGGGA 7 21827007 0.981728126 5 6 46 0.9 0.954242509 0.1 0.285714286 0.5 7 1 0 9 3L:21826983-21827025 7 14 1387 FBgn0037135 1558.176667 79.32666667 121.5733333 0.008984861 0.176485419 0.115156833 -5 1 -2 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3L 21827598 21827604 + 3L_21827598_21827604_+ 0.41864364 0.326143499 0.372393569 0.065407448 CG7414 FBtr0303247|FBtr0303245|FBtr0078441|FBtr0303246 21826936|21826936|21827526|21827526 21827856|21827856|21827856|21827856 3L + 21827549 21827636 3'utr CG7414 FlyBase G32225.1 GATGACGACGGCGGCGAGAAGGCTGAGGGATGCGAGGAGTAATTGCTCTTGTGATTGTGATACAGCACCTCTTCTCAGCTCCACTCCA 119 21827603 0.988126831 14 110 1000 0.912162162 1.528273777 0.121621622 0.193277311 0.351351351 119 10 3 135 3L:21827549-21827636 7 CG7414 FBtr0078441|FBtr0303246|FBtr0303247|FBtr0303245 21827526|21827526|21826936|21826936 21827856|21827856|21827856|21827856 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 21827514 21827634 3'utr CG7414 FlyBase G24365.1 AGCAGTCTGCCTAGGAGGACGTTAATGGCGTTGACGATGACGACGGCGGCGAGAAGGCTGAGGGATGCGAGGAGTAATTGCTCTTGTGATTGTGATACAGCACCTCTTCTCAGCTCCACTC 64 21827603 0.941208444 14 62 477 0.98019802 1.995635195 0.287128713 0.4375 0.643564356 64 2 0 99 3L:21827514-21827634 7 80 1388 FBgn0037135 1558.176667 79.32666667 121.5733333 0.05134206 1.008488108 0.658039044 -5 -5 -5 0.25 dme-miR-965-3p 6mer3-8 TACGCT 3L 21827674 21827679 + 3L_21827674_21827679_+ 0.74816433 0.976581686 0.862373008 0.161515492 CG7414 FBtr0303247|FBtr0303245|FBtr0078441|FBtr0303246 21826936|21826936|21827526|21827526 21827856|21827856|21827856|21827856 3L + 21827643 21827691 3'utr CG7414 FlyBase G32226.1 TCACCTCCTGTTCGTCCCCTTCCTGCTGTTTTACGCTCAGTTTGTGGCC 15 21827673 0.736859488 6 12 143 0.85 1.230448921 0.05 0.333333333 0.5 15 3 0 17 3L:21827643-21827691 6 CG7414 FBtr0078441|FBtr0303246|FBtr0303247|FBtr0303245 21827526|21827526|21826936|21826936 21827856|21827856|21827856|21827856 TACGCT 6mer3-8 dme-miR-965-3p 3L + 21827643 21827692 3'utr CG7414 FlyBase G24366.1 TCACCTCCTGTTCGTCCCCTTCCTGCTGTTTTACGCTCAGTTTGTGGCCC 9 21827673 0.722351232 5 8 69 1 1.113943352 0.153846154 0.333333333 0.538461538 9 0 0 13 3L:21827643-21827692 6 8 1389 FBgn0037135 1558.176667 79.32666667 121.5733333 0.005134206 0.100848811 0.065803904 1 1 1 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3L 21827734 21827740 + 3L_21827734_21827740_+ 0.519475295 0.520557461 0.520016378 0.000765231 CG7414 FBtr0303247|FBtr0303245|FBtr0078441|FBtr0303246 21826936|21826936|21827526|21827526 21827856|21827856|21827856|21827856 3L + 21827711 21827764 3'utr CG7414 FlyBase G32227.1 AAGTTAAAACATTTTTCTACTATTGTGATTTCCCAACTAATTTCGGCAAAACGT 194 21827740 0.734981933 9 190 1861 0.984 2.089905111 0.004 0.25257732 0.42 194 3 1 246 3L:21827711-21827764 7 CG7414 FBtr0078441|FBtr0303246|FBtr0303247|FBtr0303245 21827526|21827526|21826936|21826936 21827856|21827856|21827856|21827856 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 21827712 21827777 3'utr CG7414 FlyBase G24367.1 AGTTAAAACATTTTTCTACTATTGTGATTTCCCAACTAATTTCGGCAAAACGTACAGTAACTCCCG 138 21827740 0.729529215 8 131 1324 0.955 1.37794338 0.015 0.362318841 0.56 138 2 7 191 3L:21827712-21827777 7 163.5 1390 FBgn0037135 1558.176667 79.32666667 121.5733333 0.104930335 2.061097571 1.344867295 -6 -6 -6 0.25 dme-miR-968-5p 6mer3-8 ACTACT 3L 21837410 21837415 - 3L_21837410_21837415_- 0.76051568 0.999850798 0.880183239 0.169235472 P5CDh1 FBtr0332813|FBtr0303031|FBtr0078446|FBtr0078447|FBtr0078445 21836663|21836663|21836663|21836663|21836663 21837488|21837488|21837488|21837488|21837488 3L - 21837410 21837506 stop_codon P5CDh1 FlyBase G39124.1 CCATACATGTGCGAGTAAGCTGGCCGACAGAAGATGCGCAAGGGGAATGGGATGAGCAAAAGTAGTGAAAACCAGACAGGAATCTCATATAACTACT 19 21837419 0.917950468 7 16 58 0.863636364 1.278753601 0.181818182 0.105263158 0.227272727 19 3 0 19 3L:21837410-21837506 5 P5CDh1 FBtr0078445|FBtr0078446|FBtr0078447|FBtr0332813|FBtr0303031 21836663|21836663|21836663|21836663|21836663 21837488|21837488|21837488|21837488|21837488 ACTACT 6mer3-8 dme-miR-968-5p 3L - 21837390 21837471 3'utr P5CDh1 FlyBase G29544.1 GCGCAAGGGGAATGGGATGAGCAAAAGTAGTGAAAACCAGACAGGAATCTCATATAACTACTAACTATATAAACATACTTAA 9 21837418 0.937811203 7 8 30 1 1.113943352 0.307692308 0.333333333 0.538461538 9 0 0 13 3L:21837390-21837471 6 4 1391 FBgn0037138 509.79 22.77333333 34.87 0.007846368 0.175644028 0.114711787 4 3 3.5 0.25 dme-miR-14-3p 7mer-A1 AGACTGA 3L 21926166 21926172 + 3L_21926166_21926172_+ 0.820399216 0.820892003 0.82064561 0.000348462 mub FBtr0346820|FBtr0078468|FBtr0333222|FBtr0332736|FBtr0304981|FBtr0304982|FBtr0078470|FBtr0111017 21925263|21925263|21925263|21925263|21925263|21925263|21925263|21923187 21932702|21926699|21932702|21926225|21926699|21926699|21932702|21932702 3L + 21926125 21926199 3'utr mub FlyBase G32257.1 AATTGTTATCGAAATTGTATTTGTGATTTTTGAATATGTTTAGACTGATGTGCAAAATTGATTCTGTTTATTAAT 74 21926164 0.72437265 13 73 763 0.99 1.995635195 0.45 0.297297297 0.48 74 1 0 99 3L:21926125-21926199 7 mub FBtr0111017|FBtr0304982|FBtr0346820|FBtr0304981|FBtr0078468|FBtr0078470|FBtr0333222|FBtr0332736 21923187|21925263|21925263|21925263|21925263|21925263|21925263|21925263 21932702|21926699|21932702|21926699|21926699|21932702|21932702|21926225 AGACTGA 7mer-A1 dme-miR-14-3p 3L + 21926127 21926200 3'utr mub FlyBase G24387.1 TTGTTATCGAAATTGTATTTGTGATTTTTGAATATGTTTAGACTGATGTGCAAAATTGATTCTGTTTATTAATT 58 21926164 0.720590759 13 53 594 0.884057971 1.785329835 0.608695652 0.189655172 0.31884058 58 8 0 61 3L:21926127-21926200 7 35.5 1392 FBgn0262737 2368.09 79.81333333 123.0033333 0.014990984 0.444787838 0.288610065 2 2 2 0.25 dme-miR-283-5p 8mer-A1 TGATATTA 3L 21949406 21949413 + 3L_21949406_21949413_+ 0.394258698 0.266877989 0.330568343 0.090071757 CG14562 FBtr0078472|FBtr0334088 21949341|21949341 21949452|21949866 3L + 21949388 21949421 3'utr CG14562 FlyBase G32275.1 ATTGAAAATTGATAAGATTGATATTAACGTAGCA 14 21949403 0.7541915 3 11 110 0.857142857 1.079181246 0.142857143 0 0 14 2 0 12 3L:21949388-21949421 8 CG14562 FBtr0334088|FBtr0078472 21949341|21949341 21949866|21949452 TGATATTA 8mer-A1 dme-miR-283-5p 3L + 21949388 21949421 3'utr CG14562 FlyBase G24399.1 ATTGAAAATTGATAAGATTGATATTAACGTAGCA 13 21949405 0.742074261 3 13 91 1 1.397940009 0.12 0.538461538 0.76 13 0 0 25 3L:21949388-21949421 8 13.5 1393 FBgn0037142 391.14 8.676666667 13.24 0.034514496 1.555897042 1.019637462 3 1 2 0.25 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 3L 22066799 22066805 + 3L_22066799_22066805_+ 0.636183444 0.611670339 0.623926891 0.017333379 CG14561 FBtr0078480|FBtr0334111 22066716|22066716 22066967|22067216 3L + 22066714 22066833 stop_codon CG14561 FlyBase G32292.1 CTAGTGACCGCAGTCCAGCCTTCCCAACCAAAGCCATGGAGCCCTCGCTCAGACTGCCATCGATGTTCTAGAATAAGTTACCATTTACCTGAATGTATTGTTCACACCCAGCGGTCAGCA 128 22066797 0.985488387 14 123 1012 0.96835443 1.582631439 0.46835443 0.1796875 0.335443038 128 2 3 153 3L:22066714-22066833 7 CG14561 FBtr0334111|FBtr0078480 22066716|22066716 22067216|22066967 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3L + 22066745 22066827 3'utr CG14561 FlyBase G24408.1 AGCCATGGAGCCCTCGCTCAGACTGCCATCGATGTTCTAGAATAAGTTACCATTTACCTGAATGTATTGTTCACACCCAGCGG 110 22066797 0.964249231 10 101 852 0.907407407 1.264227348 0.50617284 0.327272727 0.543209877 110 8 7 147 3L:22066745-22066827 7 108 1394 FBgn0037149 161.3333333 18.83333333 28.89 0.669421488 5.734513274 3.738317757 2 2 2 0.25 dme-miR-1012-3p 6mer3-8 TTGACT 3L 22075151 22075156 - 3L_22075151_22075156_- 0.999995308 0.999514056 0.999754682 0.00034026 CG7130 FBtr0078484 22075054 22075247 3L - 22075117 22075220 3'utr CG7130 FlyBase G39167.1 AATCTCGGGTACCTAGCGTTCTTCGCTGAATAGTCTTTAAGATTAATTTATAGGAACTTAATTATTGACTGTTTATCTAATGAATCCTGCGTTACTTATTGATT 73 22075158 0.686629901 23 69 696 0.952941176 1.306425028 0.105882353 0.150684932 0.270588235 73 1 3 81 3L:22075117-22075220 6 CG7130 FBtr0078484 22075054 22075247 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 22075113 22075172 3'utr CG7130 FlyBase G29575.1 TATAGGAACTTAATTATTGACTGTTTATCTAATGAATCCTGCGTTACTTATTGATTAATT 50 22075157 0.710011617 13 49 471 0.959459459 1.851258349 0.094594595 0.38 0.581081081 50 3 0 71 3L:22075113-22075172 6 39 1395 FBgn0037151 176 32.25666667 49.12666667 0.221590909 1.209052392 0.793866196 2 1 1.5 0.25 dme-miR-92b-3p 7mer-A1 TGCAATA 3L 22257836 22257842 - 3L_22257836_22257842_- 0.772664883 0.769364766 0.771014824 0.002333523 Rich FBtr0078512 22257747 22258138 3L - 22257823 22257902 3'utr Rich FlyBase G39171.1 AACCGTAAAACCGTATGAAGCATACGCAACGTAATCCATAATTTAGTAGATGAAATTTGCTGCAATATTTGTTAATTAAA 15 22257846 0.984044994 9 15 129 1 1.230448921 0.176470588 0.066666667 0.176470588 15 0 0 17 3L:22257823-22257902 7 Rich FBtr0078512 22257747 22258138 TGCAATA 7mer-A1 dme-miR-92b-3p 3L - 22257824 22257858 3'utr Rich FlyBase G29578.1 AGTAGATGAAATTTGCTGCAATATTTGTTAATTAA 6 22257846 0.786487377 3 6 57 1 1.113943352 0 0.5 0.769230769 6 0 0 13 3L:22257824-22257858 7 8 1396 FBgn0028500 540.74 13.42666667 20.61333333 0.014794541 0.595829196 0.388098318 4 4 4 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3L 22265808 22265814 - 3L_22265808_22265814_- 0.501864002 0.436934868 0.469399435 0.045911807 CG11523 FBtr0078511 22265804 22266077 3L - 22265799 22265866 3'utr CG11523 FlyBase G39183.1 AAATGTCGCTCCAGATCCGCGTTAGACCTTAAGACGTTTCAAGAATAAAGATTGTGATTGCAACTCTA 173 22265815 0.650947509 11 163 988 0.947136564 1.55428721 0.061674009 0.231213873 0.414096916 173 7 5 215 3L:22265799-22265866 7 CG11523 FBtr0078511 22265804 22266077 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 22265799 22265880 3'utr CG11523 FlyBase G29587.1 CTTGCATAGCAAACAAATGTCGCTCCAGATCCGCGTTAGACCTTAAGACGTTTCAAGAATAAAGATTGTGATTGCAACTCTA 118 22265815 0.826435357 9 114 669 0.97826087 1.77815125 0.076086957 0.43220339 0.635869565 118 2 2 180 3L:22265799-22265880 7 139 1397 FBgn0037156 234.9133333 34.43333333 53.07666667 0.59170758 4.03678606 2.618853231 1 1 1 0.25 dme-bantam-3p 6mer3-8 TGATCT 3L 22293399 22293404 - 3L_22293399_22293404_- 0.722089003 0.882773731 0.802431367 0.113621241 Ten-m FBtr0078509 22293042 22295587 3L - 22293047 22293427 3'utr Ten-m FlyBase G39206.1 GGTCCTCTGTTCTTAAAATACTTTGATCTGTACATTTTCAGGATGGGGCAAAAGCTTAACCTACTTAATTAGTTGAGATCATGATTAGGCATATTAACTGACTAACGAAAAAGGCCAGTCCGTTAAGGCAGTTTGAGCATACATAAATTGCGAACAATAATTGTATTTAATGTACGAAATTGTCTTTAAAATATATGGATACCGAGAGAAGTGCAGAGGGTATAGGCTATAAATTACAAATCGAATGCAGACAACAAAGACAATTGTACACAAAGAAATAATTATGGCAAGCCGATATACATACATGATAAAACATCCATATAAATATATATAATAACTAATAATATTACGAGTAAAAAGCGATTTCAATAAAAATGAAAA 175 22293405 0.925795772 47 167 966 0.962264151 1.610660163 0.179245283 0.16 0.306603774 175 4 4 204 3L:22293047-22293427 6 Ten-m FBtr0078509 22293042 22295587 TGATCT 6mer3-8 dme-bantam-3p 3L - 22293285 22293485 3'utr Ten-m FlyBase G29611.1 AGATACCAAGCGGATGCCGTTGTCGAGCTCGACTGTGCTTCATCTCGTACATACCCCAGGTCCTCTGTTCTTAAAATACTTTGATCTGTACATTTTCAGGATGGGGCAAAAGCTTAACCTACTTAATTAGTTGAGATCATGATTAGGCATATTAACTGACTAACGAAAAAGGCCAGTCCGTTAAGGCAGTTTGAGCATACA 61 22293405 0.981324038 28 57 412 0.956043956 1.638489257 0.065934066 0.327868852 0.549450549 61 3 1 87 3L:22293285-22293485 6 22.5 1398 FBgn0004449 644.2766667 6.713333333 10.31666667 0.034922885 3.351539225 2.180936995 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 22294462 22294468 - 3L_22294462_22294468_- 0.497458291 0.49242584 0.494942066 0.003558515 Ten-m FBtr0306107|FBtr0306107|FBtr0306107|FBtr0330159|FBtr0330159|FBtr0330159|FBtr0078509|FBtr0078509|FBtr0078509 22293982|22293982|22293982|22293982|22293982|22293982|22293042|22293042|22293042 22295587|22295587|22295587|22295431|22295431|22295431|22295587|22295587|22295587 3L - 22294384 22295099 3'utr Ten-m FlyBase G39208.2 ACGGTGCGTATTATTTAGATTGGTCCATTAACCGATTTTGGTCGAGACAAGAGTGCATAGATCAAACCAATACGAACGGAATGATCTCGCTTGTTTCGGAAATTGGAGTTAGGACAAACACAGGCCAACAAGCCAGTTGCATTACGATGTCAAACGATGAGTATTACACAGCAAATTATGCATACGATAAGTACAGATGTTAAACTACGAAATGAATAAATGTAAAAAGATTAAAGTTCTGCATAGTAGCTCCCTAGTCTTTGGTCCAAACCTGGACTCTTTCCAACACAGCCCACTCTCAAATGGCAACAGAAATGTTGATCGCTGCTTAACCTACTTCTTCATAATTGCTCTGTGTATATACGAACGAATACTTTTCAAGCCTCCACTGACGAAAAAGCGCGTATCCTTTATCCTAACACTCATTTTAGCGAAATAGGTCTCTAAGCCGAATGCTCGAATTTAAATTTAATAGACGCGTCTACCTAATTTGGATAGCCAAGAATCAAAAGGAATTTTTATCAGTCCCCTTTCAATGCAATACAATACTCTAACGACTCTTTTCACTCATTTTATAATGTTAGCTGTTGAATTTATTCAAAGGAAAACGCATTAAAAACTTTTTACAAATTGTGATATATATTTCTAAACATTTCATTTGACAACTTGAAGTGTAGCGAAGAAAAACTCGAATTAACTCAAATCGAACCGAAAGT 1837 22294469 0.972993216 142 1734 16945 0.945722171 1.721958503 0.072217111 0.151333696 0.282888684 1837 80 38 2056 3L:22294384-22295099 7 Ten-m FBtr0078509|FBtr0078509|FBtr0078509|FBtr0330159|FBtr0330159|FBtr0330159|FBtr0306107|FBtr0306107|FBtr0306107 22293042|22293042|22293042|22293982|22293982|22293982|22293982|22293982|22293982 22295587|22295587|22295587|22295431|22295431|22295431|22295587|22295587|22295587 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 22294385 22294866 3'utr Ten-m FlyBase G29615.1 AAGTTCTGCATAGTAGCTCCCTAGTCTTTGGTCCAAACCTGGACTCTTTCCAACACAGCCCACTCTCAAATGGCAACAGAAATGTTGATCGCTGCTTAACCTACTTCTTCATAATTGCTCTGTGTATATACGAACGAATACTTTTCAAGCCTCCACTGACGAAAAAGCGCGTATCCTTTATCCTAACACTCATTTTAGCGAAATAGGTCTCTAAGCCGAATGCTCGAATTTAAATTTAATAGACGCGTCTACCTAATTTGGATAGCCAAGAATCAAAAGGAATTTTTATCAGTCCCCTTTCAATGCAATACAATACTCTAACGACTCTTTTCACTCATTTTATAATGTTAGCTGTTGAATTTATTCAAAGGAAAACGCATTAAAAACTTTTTACAAATTGTGATATATATTTCTAAACATTTCATTTGACAACTTGAAGTGTAGCGAAGAAAAACTCGAATTAACTCAAATCGAACCGAAAG 1034 22294469 0.971539297 102 973 9482 0.942743009 1.808640573 0.05792277 0.34622824 0.549933422 1034 65 21 1416 3L:22294385-22294866 7 817.5 1399 FBgn0004449 644.2766667 6.713333333 10.31666667 1.268864825 121.7725919 79.24071082 1 1 1 0.25 dme-miR-970-3p 7mer-m8 TCTTATG 3L 22295238 22295244 - 3L_22295238_22295244_- 0.623132697 0.656921349 0.640027023 0.023892148 Ten-m FBtr0306107|FBtr0330159|FBtr0078509 22293982|22293982|22293042 22295587|22295431|22295587 3L - 22295192 22295351 3'utr Ten-m FlyBase G39210.1 AAAAACAAAGGAAAAGCAAGCATTGAACACACTAATTAATATAAACTTTAATCATGCTTAAAGTTTAGTATTAGCCACAACGCAACCCTCGAATAACCGAAGAAACTTCTTATGTGTACACTGGAACAGAAATATGTATGTTGATGTTGAGTTTAGGCGT 113 22295245 0.979799473 20 80 548 0.73015873 1.185636577 0.23015873 0.097345133 0.19047619 113 29 5 92 3L:22295192-22295351 7 Ten-m FBtr0078509|FBtr0330159|FBtr0306107 22293042|22293982|22293982 22295587|22295431|22295587 TCTTATG 7mer-m8 dme-miR-970-3p 3L - 22295047 22295302 3'utr Ten-m FlyBase G29618.1 AATCATGCTTAAAGTTTAGTATTAGCCACAACGCAACCCTCGAATAACCGAAGAAACTTCTTATGTGTACACTGGAACAGAAATATGTATGTTGATGTTGAGTTTAGGCGTATGTTTAGTCCATGTGTGTAATGTTAAATGTAATTTTTTAAATCAGAATCAGTGTCCCCACGGGCAATCAGCTTGCAATGGCATTTTACGCCACGGTGCGTATTATTTAGATTGGTCCATTAACCGATTTTGGTCGAGACAAGAG 82 22295244 0.973551237 36 75 469 0.893442623 1.736396502 0.114754098 0.317073171 0.540983607 82 12 1 109 3L:22295047-22295302 7 39 1400 FBgn0004449 644.2766667 6.713333333 10.31666667 0.060533001 5.809334657 3.780290792 1 0 0.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 2259195 2259201 - 3L_2259195_2259201_- 0.76733299 0.75972654 0.763529765 0.005378608 oxt FBtr0072904|FBtr0072904|FBtr0072904 2258837|2258837|2258837 2259328|2259328|2259328 3L - 2259133 2259220 3'utr oxt FlyBase G33658.1 ATGTTTTCGTATAGATTGTTGTGATAATGTGAACTTTTAAGCGCCATTTTGACCGGAAGCGGAACTCCGCCGCTCCAATTGTATTTGA 61 2259204 0.98681453 15 56 527 0.927536232 1.329058719 0.31884058 0.098360656 0.202898551 61 3 2 64 3L:2259133-2259220 7 oxt FBtr0072904|FBtr0072904|FBtr0072904 2258837|2258837|2258837 2259328|2259328|2259328 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 2259151 2259223 3'utr oxt FlyBase G25452.1 TCGATGTTTTCGTATAGATTGTTGTGATAATGTGAACTTTTAAGCGCCATTTTGACCGGAAGCGGAACTCCGC 30 2259204 0.987907542 10 28 248 0.93877551 1.662757832 0.346938776 0.4 0.632653061 30 3 0 46 3L:2259151-2259223 7 30 1401 FBgn0015360 414.5533333 14.81333333 22.68333333 0.072367046 2.02520252 1.322556943 3 3 3 0.25 dme-miR-12-5p 7mer-m8 AATACTC 3L 2259281 2259287 - 3L_2259281_2259287_- 0.616098907 0.610712202 0.613405555 0.003808972 oxt FBtr0072904 2258837 2259328 3L - 2259255 2259296 3'utr oxt FlyBase G33659.1 TCTAGTGTAAATACTCGCCAAGATTTAGATGTCGAACCGCAA 10 2259285 0.966964605 2 10 57 1 1 0 0 0 10 0 0 10 3L:2259255-2259296 7 oxt FBtr0072904 2258837 2259328 AATACTC 7mer-m8 dme-miR-12-5p 3L - 2259248 2259295 3'utr oxt FlyBase G25453.1 CTAGTGTAAATACTCGCCAAGATTTAGATGTCGAACCGCAATTAACGA 16 2259285 0.958329289 2 15 73 1 1.380211242 0 0.25 0.5 16 0 0 24 3L:2259248-2259295 7 12.5 1402 FBgn0015360 414.5533333 14.81333333 22.68333333 0.030152936 0.843834383 0.551065393 -2 -2 -2 0.25 dme-miR-277-3p 7mer-m8 TGCATTT 3L 22714513 22714519 - 3L_22714513_22714519_- 0.575070692 0.612244807 0.59365775 0.026286058 ArfGAP3 FBtr0330174|FBtr0330173|FBtr0330175|FBtr0078540|FBtr0078539|FBtr0113186|FBtr0331775 22714406|22714406|22714406|22714406|22714311|22714406|22714406 22714943|22714943|22714943|22714943|22714943|22714943|22714943 3L - 22714491 22714529 3'utr ArfGAP3 FlyBase G39308.1 AATTACAATTTGCATTTCGGCTGGGCAGCTTTTAATTTT 5 22714520 0.983505365 2 5 39 1 0.84509804 0.142857143 0.2 0.428571429 5 0 0 7 3L:22714491-22714529 7 ArfGAP3 FBtr0078540|FBtr0330175|FBtr0330173|FBtr0330174|FBtr0331775|FBtr0113186|FBtr0078539 22714406|22714406|22714406|22714406|22714406|22714406|22714311 22714943|22714943|22714943|22714943|22714943|22714943|22714943 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 22714488 22714536 3'utr ArfGAP3 FlyBase G29691.1 GTTTTGAAATTACAATTTGCATTTCGGCTGGGCAGCTTTTAATTTTTTC 6 22714519 0.963016922 4 6 57 1 0.954242509 0.111111111 0.333333333 0.555555556 6 0 0 9 3L:22714488-22714536 7 4.5 1403 FBgn0037182 511.4866667 25.40666667 39.02333333 0.008797883 0.177118866 0.115315623 1 0 0.5 0.25 dme-miR-1007-3p 7mer-m8 TGAGCTT 3L 22739004 22739010 - 3L_22739004_22739010_- 0.43824203 0.474809171 0.456525601 0.025856915 l(3)04053 FBtr0078535 22738600 22739100 3L - 22738958 22739046 3'utr l(3)04053 FlyBase G39330.1 TTTTCTGTGTAAACACTGTATCCCACGACTTCGCATTGAGCTTGTTTTTAGATGACCCCGCAAACATTTTATGTTTCCGTATTATCTGT 12 22739010 0.985792133 4 11 103 1 1.146128036 0.071428571 0.166666667 0.285714286 12 0 0 14 3L:22738958-22739046 7 l(3)04053 FBtr0078535 22738600 22739100 TGAGCTT 7mer-m8 dme-miR-1007-3p 3L - 22738993 22739049 3'utr l(3)04053 FlyBase G29707.1 TTGTTTTCTGTGTAAACACTGTATCCCACGACTTCGCATTGAGCTTGTTTTTAGATG 11 22739010 0.80586764 6 11 101 1 1.113943352 0.307692308 0.181818182 0.307692308 11 0 0 13 3L:22738993-22739049 7 7 1404 FBgn0010830 273 13.44666667 20.59666667 0.025641026 0.520575112 0.339860819 0 0 0 0.25 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 22747952 22747958 + 3L_22747952_22747958_+ 0.609123473 0.604267571 0.606695522 0.00343364 CG7369 FBtr0078530 22747716 22748614 3L + 22747938 22747969 3'utr CG7369 FlyBase G32401.1 ATTTCCGTTATCTTTGTGTTCCTGTTCCAAAT 77 22747951 0.707693543 6 76 831 0.99122807 2.053078443 0.105263158 0.38961039 0.587719298 77 1 0 113 3L:22747938-22747969 7 CG7369 FBtr0078530 22747716 22748614 TGTGTTC 7mer-m8 dme-miR-317-3p 3L + 22747938 22747972 3'utr CG7369 FlyBase G24485.1 ATTTCCGTTATCTTTGTGTTCCTGTTCCAAATTTG 62 22747951 0.707773385 6 61 674 1 1.995635195 0.181818182 0.435483871 0.646464646 62 0 0 99 3L:22747938-22747972 7 69 1405 FBgn0037188 267.3333333 8.483333333 12.97666667 0.258104738 8.133595285 5.317236065 1 1 1 0.25 dme-miR-8-3p 7mer-m8 CAGTATT 3L 22748217 22748223 + 3L_22748217_22748223_+ 0.661615003 0.587907959 0.624761481 0.05211872 CG7369 FBtr0078530 22747716 22748614 3L + 22748170 22748231 3'utr CG7369 FlyBase G32404.1 AAACCAATCTGACAAAGCTACATGAGTACGCGATATCCGTACGTGACCAGTATTTATATTTA 14 22748224 0.751754552 11 14 84 1 1.230448921 0.117647059 0.214285714 0.352941176 14 0 0 17 3L:22748170-22748231 7 CG7369 FBtr0078530 22747716 22748614 CAGTATT 7mer-m8 dme-miR-8-3p 3L + 22748185 22748227 3'utr CG7369 FlyBase G24487.1 AGCTACATGAGTACGCGATATCCGTACGTGACCAGTATTTATA 13 22748222 0.789043986 8 12 75 0.863636364 1.278753601 0 0.384615385 0.636363636 13 3 0 19 3L:22748185-22748227 7 9 1406 FBgn0037188 267.3333333 8.483333333 12.97666667 0.033665835 1.060903733 0.69355253 -7 -5 -6 0.25 dme-miR-282-5p 6mer2-7 GAGGCT 3L 22748323 22748328 + 3L_22748323_22748328_+ 0.998546265 0.724913392 0.861729828 0.193487679 CG7369 FBtr0078530 22747716 22748614 3L + 22748297 22748344 3'utr CG7369 FlyBase G32405.1 AACGGATTTCATTCTGATTCTGTCTCGAGGCTTTTTGCATCAGCAACA 41 22748329 0.706988239 6 41 396 1 1.716003344 0.096153846 0.243902439 0.403846154 41 0 0 52 3L:22748297-22748344 6 CG7369 FBtr0078530 22747716 22748614 GAGGCT 6mer2-7 dme-miR-282-5p 3L + 22748307 22748344 3'utr CG7369 FlyBase G24488.1 ATTCTGATTCTGTCTCGAGGCTTTTTGCATCAGCAACA 24 22748330 0.628369442 7 24 229 1 1.568201724 0.189189189 0.375 0.594594595 24 0 0 37 3L:22748307-22748344 6 32.5 1407 FBgn0037188 267.3333333 8.483333333 12.97666667 0.121571072 3.831041257 2.504495248 -6 -7 -6.5 0.25 dme-miR-283-5p 8mer-A1 TGATATTA 3L 22748527 22748534 + 3L_22748527_22748534_+ 0.587960556 0.36550785 0.476734203 0.157297883 CG7369 FBtr0078530 22747716 22748614 3L + 22748496 22748539 3'utr CG7369 FlyBase G32406.1 GATTTTGCAATATTGTGGATGAATTCATTATTGATATTAATTAT 7 22748525 0.989985562 5 7 69 1 0.84509804 0.142857143 0 0 7 0 0 7 3L:22748496-22748539 8 CG7369 FBtr0078530 22747716 22748614 TGATATTA 8mer-A1 dme-miR-283-5p 3L + 22748490 22748534 3'utr CG7369 FlyBase G24489.1 TTGCAAGATTTTGCAATATTGTGGATGAATTCATTATTGATATTA 6 22748523 0.993493826 4 5 62 0.833333333 0.698970004 0 0 0 6 1 0 5 3L:22748490-22748534 8 4.5 1408 FBgn0037188 267.3333333 8.483333333 12.97666667 0.016832918 0.530451866 0.346776265 2 4 3 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 22785085 22785091 + 3L_22785085_22785091_+ 0.688882605 0.705974759 0.697428682 0.012086011 SPoCk FBtr0306600|FBtr0306600|FBtr0306600|FBtr0113437|FBtr0113437|FBtr0113437|FBtr0078531|FBtr0078531|FBtr0078531|FBtr0078532|FBtr0078532|FBtr0078532|FBtr0332105|FBtr0332105|FBtr0332105|FBtr0302134|FBtr0302134|FBtr0302134 22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486 22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235 3L + 22784943 22785114 3'utr SPoCk FlyBase G32424.1 TACAATGGGCTGCAAAGCTTTTTTTATTTAACTTTTATTTTCATTTTATCTCTAAGTGCTTCTCTAGTTTCTAATGCTCACCGCGCAATTTGAGTCAATATGAAGTGTTTAATAATCTACAATGTCGGCAAAAACTGTTTAATGTGATATTATTTTAAGCACATAAACCAGA 198 22785081 0.991691345 22 184 2018 0.940677966 1.568201724 0.084745763 0.151515152 0.288135593 198 9 5 222 3L:22784943-22785114 7 SPoCk FBtr0302134|FBtr0302134|FBtr0302134|FBtr0332105|FBtr0332105|FBtr0332105|FBtr0078532|FBtr0078532|FBtr0078532|FBtr0078531|FBtr0078531|FBtr0078531|FBtr0113437|FBtr0113437|FBtr0113437|FBtr0306600|FBtr0306600|FBtr0306600 22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486 22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 22785056 22785115 3'utr SPoCk FlyBase G24498.2 AATCTACAATGTCGGCAAAAACTGTTTAATGTGATATTATTTTAAGCACATAAACCAGAT 107 22785081 0.719970686 11 96 1054 0.89261745 1.220761654 0.067114094 0.289719626 0.489932886 107 9 7 133 3L:22785056-22785115 7 135.5 1409 FBgn0052451 1200.69 35.10333333 53.84666667 0.112851777 3.860032286 2.516404606 4 4 4 0.25 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 22786246 22786253 + 3L_22786246_22786253_+ 0.668065479 0.668375728 0.668220603 0.000219345 SPoCk FBtr0078533 22784486 22787631 3L + 22786198 22786275 3'utr SPoCk FlyBase G32425.1 GCTCACTCTGTCCGTCCGTATGTCTATCCGTATAAATGTAGAAATCTTGGCAGCTATAAAAGCTAGAGGTTAGGCATG 32 22786245 0.981636243 7 27 200 0.828571429 0.985276743 0.228571429 0.09375 0.171428571 32 4 2 29 3L:22786198-22786275 8 SPoCk FBtr0078533 22784486 22787631 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L + 22786197 22786272 3'utr SPoCk FlyBase G24500.1 TGCTCACTCTGTCCGTCCGTATGTCTATCCGTATAAATGTAGAAATCTTGGCAGCTATAAAAGCTAGAGGTTAGGC 19 22786245 0.973504655 4 19 119 1 1.477121255 0.433333333 0.526315789 0.7 19 0 0 30 3L:22786197-22786272 8 24.5 1410 FBgn0052451 1200.69 35.10333333 53.84666667 0.020404934 0.697939417 0.454995667 1 1 1 0.25 dme-miR-12-5p 7mer-A1 ATACTCA 3L 22790253 22790259 - 3L_22790253_22790259_- 0.823306482 0.736507192 0.779906837 0.061376374 jim FBtr0078582|FBtr0304985 22789231|22789231 22797911|22797911 3L - 22790212 22790310 3'utr jim FlyBase G39340.1 CGGAACAACACTAATCTCGGTCATTGCAAAATTGATTGCATAAAACAATGTATACTCAAGTCTTGGCAACTATTTAAAAAAAAATTCACGTTTAATTCC 23 22790262 0.974170267 7 23 141 1 1.431363764 0.148148148 0.173913043 0.296296296 23 0 0 27 3L:22790212-22790310 7 jim FBtr0304985|FBtr0078582 22789231|22789231 22797911|22797911 ATACTCA 7mer-A1 dme-miR-12-5p 3L - 22790214 22790268 3'utr jim FlyBase G29715.1 AAACAATGTATACTCAAGTCTTGGCAACTATTTAAAAAAAAATTCACGTTTAATT 11 22790247 0.976771395 5 11 70 1 1.230448921 0.058823529 0.454545455 0.647058824 11 0 0 17 3L:22790214-22790268 7 12.5 1411 FBgn0027339 2455.313333 43.04666667 66.12 0.005091 0.290382531 0.189050212 3 -12 -4.5 0.25 dme-miR-33-5p 7mer-A1 AATGCAA 3L 22796093 22796099 - 3L_22796093_22796099_- 0.554743761 0.531439754 0.543091757 0.016478416 jim FBtr0078582|FBtr0333212|FBtr0100184|FBtr0330076|FBtr0333213|FBtr0333211|FBtr0304985 22789231|22795975|22795975|22795975|22795975|22795975|22789231 22797911|22797911|22797911|22797557|22797911|22797911|22797911 3L - 22796046 22796107 5'utr jim FlyBase G39342.1 AAGTTTCTAATGCAATCAAAGTAAGTGCTCCGAATACGGTTTGTTTTCACTGTTTTAAATTT 22 22796085 0.879169256 10 21 180 0.931034483 1.431363764 0.275862069 0.272727273 0.448275862 22 2 0 27 3L:22796046-22796107 7 jim FBtr0333211|FBtr0304985|FBtr0330076|FBtr0333213|FBtr0100184|FBtr0078582|FBtr0333212 22795975|22789231|22795975|22795975|22795975|22789231|22795975 22797911|22797911|22797557|22797911|22797911|22797911|22797911 AATGCAA 7mer-A1 dme-miR-33-5p 3L - 22796010 22796107 5'utr jim FlyBase G29718.1 AAGTTTCTAATGCAATCAAAGTAAGTGCTCCGAATACGGTTTGTTTTCACTGTTTTAAATTTAAAGTTTATGAATTATGTTTGGATATTTTATTTAAA 14 22796082 0.985388586 11 12 115 0.909090909 1 0.045454545 0.5 0.681818182 14 1 1 20 3L:22796010-22796107 7 6.5 1412 FBgn0027339 2455.313333 43.04666667 66.12 0.00264732 0.150998916 0.09830611 -14 -17 -15.5 0.25 dme-miR-283-5p 8mer-m1 TGATATTT 3L 22796248 22796255 - 3L_22796248_22796255_- 0.535585263 0.55107055 0.543327906 0.01094969 jim FBtr0078582|FBtr0333212|FBtr0100184|FBtr0330076|FBtr0333213|FBtr0333211|FBtr0304985 22789231|22795975|22795975|22795975|22795975|22795975|22789231 22797911|22797911|22797911|22797557|22797911|22797911|22797911 3L - 22796176 22796348 5'utr jim FlyBase G39344.1 AGTTCTTCCCCTGCCAACTGTGTGGATATAATCGACAAATTTAGTTTCTTAACAAATTTTCCAATGTACCGTCAAAGCATTTATAACTGTTATTGATATTTTAGAATATGTTTCCTAAAAAGTATACATATTTTATGTATATGTAGAAAACACCGTGGAAGATAAGAAATTAT 75 22796284 0.99043153 22 68 691 0.914634146 1.176091259 0.024390244 0.093333333 0.170731707 75 3 4 75 3L:22796176-22796348 8 jim FBtr0333211|FBtr0304985|FBtr0330076|FBtr0333213|FBtr0100184|FBtr0078582|FBtr0333212 22795975|22789231|22795975|22795975|22795975|22789231|22795975 22797911|22797911|22797557|22797911|22797911|22797911|22797911 TGATATTT 8mer-m1 dme-miR-283-5p 3L - 22796212 22796357 5'utr jim FlyBase G29720.1 CACCATCTAAGTTCTTCCCCTGCCAACTGTGTGGATATAATCGACAAATTTAGTTTCTTAACAAATTTTCCAATGTACCGTCAAAGCATTTATAACTGTTATTGATATTTTAGAATATGTTTCCTAAAAAGTATACATATTTTATG 62 22796284 0.991149783 21 51 548 0.831168831 1.204119983 0.064935065 0.209677419 0.363636364 62 10 3 64 3L:22796212-22796357 8 27 1413 FBgn0027339 2455.313333 43.04666667 66.12 0.01099656 0.627226266 0.408348457 29 29 29 0.25 dme-miR-7-5p 7mer-m8 GTCTTCC 3L 22796627 22796633 - 3L_22796627_22796633_- 0.696725611 0.704930958 0.700828284 0.005802094 jim FBtr0078582|FBtr0333212|FBtr0100184|FBtr0330076|FBtr0333213|FBtr0333211|FBtr0304985 22789231|22795975|22795975|22795975|22795975|22795975|22789231 22797911|22797911|22797911|22797557|22797911|22797911|22797911 3L - 22796595 22796671 5'utr jim FlyBase G39345.1 ATGAAACCTTAAGTACATTGACTTAGGATTCATTTGTTGTCTTCCCCAACTAATTATGTGTAATTTATGTTGAGTTT 37 22796634 0.989463104 9 36 350 0.956521739 1.643452676 0.086956522 0.216216216 0.369565217 37 2 0 44 3L:22796595-22796671 7 jim FBtr0333211|FBtr0304985|FBtr0330076|FBtr0333213|FBtr0100184|FBtr0078582|FBtr0333212 22795975|22789231|22795975|22795975|22795975|22789231|22795975 22797911|22797911|22797557|22797911|22797911|22797911|22797911 GTCTTCC 7mer-m8 dme-miR-7-5p 3L - 22796618 22796664 5'utr jim FlyBase G29721.1 CTTAAGTACATTGACTTAGGATTCATTTGTTGTCTTCCCCAACTAAT 22 22796634 0.647549083 8 21 194 0.931034483 0.954242509 0.068965517 0.272727273 0.448275862 22 0 2 27 3L:22796618-22796664 7 22 1414 FBgn0027339 2455.313333 43.04666667 66.12 0.00896016 0.511073254 0.332728373 1 1 1 0.25 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 22796997 22797004 - 3L_22796997_22797004_- 0.668722383 0.668721713 0.668722048 4.95E-07 jim FBtr0078582|FBtr0333212|FBtr0100184|FBtr0330076|FBtr0333213|FBtr0333211|FBtr0304985 22789231|22795975|22795975|22795975|22795975|22795975|22789231 22797911|22797911|22797911|22797557|22797911|22797911|22797911 3L - 22796888 22797086 5'utr jim FlyBase G39347.1 AATTAATCGAGGATATACCACTTAGGCGTAATACTAGGATAGCTCCGATACAATGAGTATGAACATGTGACGTGATAGATAGGGCAGCTATTTGTGGCGAAGGCAGAAGGGGCAGAGCAAAAGGTTGATGGCAAAGAATAGGATGGGGAACGCAGACGTTGGCGCTGAGTAATTTGATTTTTGAAGCAGCATCAAAATT 194 22796995 0.956738101 29 175 1173 0.902542373 1.851258349 0.419491525 0.164948454 0.313559322 194 21 2 213 3L:22796888-22797086 8 jim FBtr0333211|FBtr0304985|FBtr0330076|FBtr0333213|FBtr0100184|FBtr0078582|FBtr0333212 22795975|22789231|22795975|22795975|22795975|22789231|22795975 22797911|22797911|22797557|22797911|22797911|22797911|22797911 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L - 22796917 22797090 5'utr jim FlyBase G29724.1 ATACAATTAATCGAGGATATACCACTTAGGCGTAATACTAGGATAGCTCCGATACAATGAGTATGAACATGTGACGTGATAGATAGGGCAGCTATTTGTGGCGAAGGCAGAAGGGGCAGAGCAAAAGGTTGATGGCAAAGAATAGGATGGGGAACGCAGACGTTGGCGCTGAGT 151 22797007 0.966308775 22 135 919 0.848360656 1.838849091 0.409836066 0.42384106 0.643442623 151 35 2 207 3L:22796917-22797090 8 132.5 1415 FBgn0027339 2455.313333 43.04666667 66.12 0.053964599 3.078054824 2.003932244 -9 3 -3 0.25 dme-miR-14-3p 6mer3-8 AAGACT 3L 22797170 22797175 - 3L_22797170_22797175_- 0.959200762 0.949734895 0.954467828 0.006693402 jim FBtr0078582|FBtr0333212|FBtr0100184|FBtr0330076|FBtr0333213|FBtr0333211|FBtr0304985 22789231|22795975|22795975|22795975|22795975|22795975|22789231 22797911|22797911|22797911|22797557|22797911|22797911|22797911 3L - 22797155 22797278 5'utr jim FlyBase G39348.1 GGTCAATGTGTAAGAGAAGTAATGAGCAGAATGAAGGAGAGAAACGAGAGCCAAAACACAACGTTATACGATTTCTATTTGTTTTAGCACCCCAACAACTTTTAAGACTAAAAATACATCAAAT 31 22797177 0.999975171 11 27 131 0.861111111 1.491361694 0.25 0.161290323 0.277777778 31 5 0 31 3L:22797155-22797278 6 jim FBtr0333211|FBtr0304985|FBtr0330076|FBtr0333213|FBtr0100184|FBtr0078582|FBtr0333212 22795975|22789231|22795975|22795975|22795975|22789231|22795975 22797911|22797911|22797557|22797911|22797911|22797911|22797911 AAGACT 6mer3-8 dme-miR-14-3p 3L - 22797156 22797204 5'utr jim FlyBase G29725.1 CTATTTGTTTTAGCACCCCAACAACTTTTAAGACTAAAAATACATCAAA 15 22797176 0.549390533 4 13 77 0.823529412 1.146128036 0 0.133333333 0.235294118 15 3 0 14 3L:22797156-22797204 6 12.5 1416 FBgn0027339 2455.313333 43.04666667 66.12 0.005091 0.290382531 0.189050212 2 1 1.5 0.25 dme-bantam-3p 6mer2-7 GATCTC 3L 22797563 22797568 - 3L_22797563_22797568_- 0.987198113 0.852645735 0.919921924 0.095142914 jim FBtr0078582|FBtr0333212|FBtr0100184|FBtr0333213|FBtr0333211|FBtr0304985 22789231|22795975|22795975|22795975|22795975|22789231 22797911|22797911|22797911|22797911|22797911|22797911 3L - 22797366 22797611 stop_codon jim FlyBase G39350.1 TCACACGCGATTCCCATTCATCCACACATACACTCGATATTCGGATCTCTATGATGTCATCAGTAGGAGAGACAGGAGCCGGAGGCAGGAATTCAAAGTTAATAAACACAAACTATTCACCATACTTCATAGGTTCGATTAGTTCTTTAGTATTAGACGCAAAACAAATTCTCCTAGTTTTTAAAACTAATCTTAAAATCACAAAACACAGTTTGGTAATGGCAAACGAACGAACCGAGAGGAGCT 115 22797561 0.983779384 27 105 819 0.925925926 1.619788758 0.192592593 0.147826087 0.274074074 115 8 2 125 3L:22797366-22797611 6 jim FBtr0333211|FBtr0304985|FBtr0333213|FBtr0100184|FBtr0078582|FBtr0333212 22795975|22789231|22795975|22795975|22789231|22795975 22797911|22797911|22797911|22797911|22797911|22797911 GATCTC 6mer2-7 dme-bantam-3p 3L - 22797416 22797598 stop_codon jim FlyBase G29727.1 CCATTCATCCACACATACACTCGATATTCGGATCTCTATGATGTCATCAGTAGGAGAGACAGGAGCCGGAGGCAGGAATTCAAAGTTAATAAACACAAACTATTCACCATACTTCATAGGTTCGATTAGTTCTTTAGTATTAGACGCAAAACAAATTCTCCTAGTTTTTAAAACTAATCTTAA 81 22797561 0.970681368 19 75 596 0.918699187 2.053078443 0.276422764 0.419753086 0.617886179 81 10 0 113 3L:22797416-22797598 6 52.5 1417 FBgn0027339 2455.313333 43.04666667 66.12 0.0213822 1.219606628 0.794010889 -7 -7 -7 0.25 dme-miR-8-3p 7mer-A1 AGTATTA 3L 22905391 22905397 + 3L_22905391_22905397_+ 0.800372009 0.816284785 0.808328397 0.011252049 BoYb FBtr0078559 22905182 22905470 3L + 22905369 22905405 3'utr BoYb FlyBase G32463.1 TAGAAAAAATCGTGTGCTCTTGAGTATTAAAACCTGT 11 22905389 0.733891611 3 10 89 0.933333333 1.146128036 0.066666667 0.272727273 0.466666667 11 1 0 14 3L:22905369-22905405 7 BoYb FBtr0078559 22905182 22905470 AGTATTA 7mer-A1 dme-miR-8-3p 3L + 22905367 22905401 3'utr BoYb FlyBase G24523.1 ACTAGAAAAAATCGTGTGCTCTTGAGTATTAAAAC 6 22905388 0.974411496 3 6 39 1 1 0 0.666666667 0.8 6 0 0 10 3L:22905367-22905401 7 8 1418 FBgn0037205 488.74 16.67 25.54666667 0.016368621 0.479904019 0.313152401 2 3 2.5 0.25 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 22914478 22914484 + 3L_22914478_22914484_+ 0.823056929 0.819963969 0.821510449 0.002187011 CG12768 FBtr0331397|FBtr0331396 22914244|22914244 22914758|22914758 3L + 22914453 22914504 3'utr CG12768 FlyBase G32470.1 AAATAATTTTTTGACTTCGCCTACTGCAGCTATATTATAAAGTCGTCCGATT 12 22914477 0.793827541 5 12 102 1 1.113943352 0 0.083333333 0.153846154 12 0 0 13 3L:22914453-22914504 7 CG12768 FBtr0331396|FBtr0331397 22914244|22914244 22914758|22914758 GCAGCTA 7mer-A1 dme-miR-980-3p 3L + 22914462 22914490 3'utr CG12768 FlyBase G24530.1 TTTGACTTCGCCTACTGCAGCTATATTAT 11 22914475 0.703517005 5 10 74 0.928571429 1.113943352 0.142857143 0.181818182 0.357142857 11 1 0 13 3L:22914462-22914490 7 11 1419 FBgn0037206 334.1233333 20.85 31.84666667 0.032921975 0.527577938 0.345405066 1 3 2 0.25 dme-miR-263a-5p 8mer-A1 GTGCCATA 3L 22951555 22951562 + 3L_22951555_22951562_+ 0.563975659 0.564507315 0.564241487 0.000375898 Mes2 FBtr0078561|FBtr0078563 22951389|22951389 22952248|22952248 3L + 22951204 22951589 stop_codon Mes2 FlyBase G32487.1 GGGCGTCGCAAGCGGAGGGTTGGATCTGCCGCCCCCACAAACTGTACGTGAGGTTTTGAACTCCAAGTTCTGCGGCTTTATTTCAGCCAAGCTAAACAGCATGGAGGACTCGGACGCGGACAATTTAATGAATCGCATTCTTCTCTTACTGGTTCAAGTGCAGCAGTGCGAAGGGTCCACGAAATAGACAGCGGAGGAGAAGAGCGCTAAGTGTACGGGTGTAATTATAGTAGCCAAAAAAAAGTACATAATGGAATGATGTTGCTGCTCAGAGCACTTATAACTGAATTTTCTTGCCATTATATATTACTTTCCTAAAGAAATACAAATTTACTTGCCAATGCCAAATCTGTGCCATACCAAAAGGATCAATCAAATATGAATGA 970 22951554 0.999995003 64 933 5859 0.966192171 2.190731785 0.072064057 0.135051546 0.253558719 970 32 6 1086 3L:22951204-22951589 8 Mes2 FBtr0078561|FBtr0078563 22951389|22951389 22952248|22952248 GTGCCATA 8mer-A1 dme-miR-263a-5p 3L + 22951332 22951588 stop_codon Mes2 FlyBase G24549.1 TGAATCGCATTCTTCTCTTACTGGTTCAAGTGCAGCAGTGCGAAGGGTCCACGAAATAGACAGCGGAGGAGAAGAGCGCTAAGTGTACGGGTGTAATTATAGTAGCCAAAAAAAAGTACATAATGGAATGATGTTGCTGCTCAGAGCACTTATAACTGAATTTTCTTGCCATTATATATTACTTTCCTAAAGAAATACAAATTTACTTGCCAATGCCAAATCTGTGCCATACCAAAAGGATCAATCAAATATGAATG 652 22951554 0.969292382 43 621 3926 0.952565344 2.390935107 0.065827686 0.377300613 0.60696999 652 46 3 984 3L:22951332-22951588 8 531 1420 FBgn0037207 3401.653333 185.0666667 283.5166667 0.156100563 2.869236311 1.872905767 1 1 1 0.25 dme-miR-79-3p 7mer-A1 AGCTTTA 3L 22951968 22951974 + 3L_22951968_22951974_+ 0.823349562 0.823348523 0.823349043 7.78E-07 Mes2 FBtr0078561|FBtr0078563 22951389|22951389 22952248|22952248 3L + 22951892 22952067 3'utr Mes2 FlyBase G32488.1 AAAAAGCGAGCATATTACTCATAGTTTCATATACAGCGATATGAATATTAACAATATCTGAACACTAAATGAGAACAGCTTTAACAATTTGTCGTTTTTGAATAAAACACCATCTTTGGCAGTAATGCTTTGCTATCGATGTACGCAGACAATGTTTTGGCCATTCAGCCCAATTT 46 22951961 0.922966987 25 43 358 0.936170213 1.643452676 0.191489362 0.02173913 0.042553191 46 3 0 44 3L:22951892-22952067 7 Mes2 FBtr0078561|FBtr0078563 22951389|22951389 22952248|22952248 AGCTTTA 7mer-A1 dme-miR-79-3p 3L + 22951843 22952013 3'utr Mes2 FlyBase G24552.1 CTTGTTAAGTTGAAAACGTAGAAATTAGAAAAGAAAAGTTTTTAACTTAAAAAAGCGAGCATATTACTCATAGTTTCATATACAGCGATATGAATATTAACAATATCTGAACACTAAATGAGAACAGCTTTAACAATTTGTCGTTTTTGAATAAAACACCATCTTTGGCAG 34 22951980 0.983481742 16 30 237 0.914893617 1.633468456 0.191489362 0.294117647 0.489361702 34 4 0 43 3L:22951843-22952013 7 7 1421 FBgn0037207 3401.653333 185.0666667 283.5166667 0.002057823 0.037824207 0.024689907 7 -12 -2.5 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 22952122 22952127 + 3L_22952122_22952127_+ 0.931090056 0.61051071 0.770800383 0.226683868 Mes2 FBtr0078561|FBtr0078563 22951389|22951389 22952248|22952248 3L + 22952090 22952135 3'utr Mes2 FlyBase G32489.1 TTTCCGTTTTTCGGTGGATATTGAGTAATAAAGTACCTTTAAATAT 8 22952129 0.638003695 5 8 57 1 0.954242509 0 0.125 0.222222222 8 0 0 9 3L:22952090-22952135 6 Mes2 FBtr0078561|FBtr0078563 22951389|22951389 22952248|22952248 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 22952063 22952182 3'utr Mes2 FlyBase G24553.1 AATTTAAATCAAAAATTTTGAAAAAGTTTTCCGTTTTTCGGTGGATATTGAGTAATAAAGTACCTTTAAATATAAAAAAATCAAACGTGTCTACCGAACATGAACATAATCAGCCGATTT 24 22952129 0.985394676 12 21 176 0.914285714 1.505149978 0.114285714 0.416666667 0.6 24 3 0 32 3L:22952063-22952182 6 9 1422 FBgn0037207 3401.653333 185.0666667 283.5166667 0.002645772 0.048631124 0.031744166 -7 -7 -7 0.25 dme-miR-988-3p 7mer-A1 CAAGGGA 3L 23318907 23318913 - 3L_23318907_23318913_- 0.744330051 0.755196371 0.749763211 0.007683634 alpha-Cat FBtr0339894 23318644 23329837 3L - 23318893 23318943 3'utr alpha-Cat FlyBase G39447.2 AAAACCAGAAGAAGTACGGGCCAAAGTTCGCAAGGGATCTCAAAAAAAGGT 31 23318917 0.942441584 3 26 88 0.891891892 1.217483944 0.216216216 0.193548387 0.324324324 31 3 1 33 3L:23318893-23318943 7 alpha-Cat FBtr0339894 23318644 23329837 CAAGGGA 7mer-A1 dme-miR-988-3p 3L - 23318893 23318964 3'utr alpha-Cat FlyBase G29804.1 AAAACCATTGGTCAGGCCTGAAAAACCAGAAGAAGTACGGGCCAAAGTTCGCAAGGGATCTCAAAAAAAGGT 27 23318917 0.759385332 7 25 88 0.930232558 1.602059991 0.209302326 0.481481481 0.674418605 27 3 0 40 3L:23318893-23318964 7 24.5 1423 FBgn0010215 3733.256667 144.9433333 221.23 0.006562635 0.169031576 0.110744474 4 4 4 0.25 dme-miR-1012-3p 6mer3-8 TTGACT 3L 23329045 23329050 - 3L_23329045_23329050_- 0.990180525 0.897366711 0.943773618 0.065629267 alpha-Cat FBtr0339894 23318644 23329837 3L - 23328997 23329069 5'utr alpha-Cat FlyBase G39459.1 AATAAATGCAGCATCGATATTGACTGTTAGACCGAATTCAAAAGTAGCTCAAGAAAATATGACTACTTATCGA 173 23329043 0.975078345 8 172 1076 0.995614035 2.054995862 0.210526316 0.25433526 0.434210526 173 0 1 227 3L:23328997-23329069 6 alpha-Cat FBtr0339894 23318644 23329837 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 23329017 23329067 5'utr alpha-Cat FlyBase G29811.1 TAAATGCAGCATCGATATTGACTGTTAGACCGAATTCAAAAGTAGCTCAAG 87 23329043 0.970834668 6 87 541 1 2.117271296 0.145038168 0.413793103 0.610687023 87 0 0 131 3L:23329017-23329067 6 127 1424 FBgn0010215 3733.256667 144.9433333 221.23 0.034018556 0.876204494 0.574063192 -7 -7 -7 0.25 dme-miR-305-5p 7mer-A1 GTACAAA 3L 234028 234034 - 3L_234028_234034_- 0.766009778 0.767784858 0.766897318 0.001255185 E(bx) FBtr0332101|FBtr0332103|FBtr0301348|FBtr0072522|FBtr0332102|FBtr0332104|FBtr0072521 233924|233924|233924|233924|233924|233924|233924 236879|234298|234298|234298|234298|234298|234298 3L - 233951 234112 3'utr E(bx) FlyBase G32851.1 AACGTACACCAGTATGCAATAAATTTCATATTCACCAGACATTTGTAAGATTAAAAATAATTAAGTAAAACCCCCTTTGTACAAAACATTAAAGTGTAAATAAACAGCATGCATTTCATTTGATATCCTTATCATATGCTGTAGGTTTAAACTTAGGCGTAT 118 234036 0.940288501 20 113 826 0.957746479 1.531478917 0.035211268 0.169491525 0.309859155 118 3 3 136 3L:233951-234112 7 E(bx) FBtr0072521|FBtr0332104|FBtr0332102|FBtr0072522|FBtr0301348|FBtr0332103|FBtr0332101 233924|233924|233924|233924|233924|233924|233924 234298|234298|234298|234298|234298|234298|236879 GTACAAA 7mer-A1 dme-miR-305-5p 3L - 233965 234094 3'utr E(bx) FlyBase G24839.1 ATAAATTTCATATTCACCAGACATTTGTAAGATTAAAAATAATTAAGTAAAACCCCCTTTGTACAAAACATTAAAGTGTAAATAAACAGCATGCATTTCATTTGATATCCTTATCATATGCTGTAGGTTT 88 234036 0.756104698 16 81 580 0.9375 1.477121255 0.0234375 0.329545455 0.5390625 88 5 3 120 3L:233965-234094 7 60 1425 FBgn0000541 5641.79 79.62333333 122.1466667 0.010634923 0.753547955 0.49121275 2 2 2 0.25 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3L 234419 234424 - 3L_234419_234424_- 0.799834518 0.560881698 0.680358108 0.168965145 E(bx) FBtr0332101 233924 236879 3L - 234387 234475 3'utr E(bx) FlyBase G32854.1 TCAAACACCTATACCAAACTATCTGAGTTTATAGGCGATATGACAAAAATTTTTGACAACTGCCGTTACTATAACCCAAAAGAATCATC 16 234409 0.979514159 12 15 100 0.947368421 1.255272505 0.157894737 0.1875 0.315789474 16 1 0 18 3L:234387-234475 6 E(bx) FBtr0332101 233924 236879 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3L - 234393 234431 3'utr E(bx) FlyBase G24842.1 AAAAATTTTTGACAACTGCCGTTACTATAACCCAAAAGA 6 234410 0.968554305 5 5 42 0.875 0.84509804 0 0.333333333 0.5 6 1 0 7 3L:234393-234431 6 6.5 1426 FBgn0000541 5641.79 79.62333333 122.1466667 0.001152117 0.081634362 0.053214715 -15 -14 -14.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3L 235158 235165 - 3L_235158_235165_- 0.424216111 0.397219967 0.410718039 0.019089125 E(bx) FBtr0332101|FBtr0332101|FBtr0332101 233924|233924|233924 236879|236879|236879 3L - 235106 235189 3'utr E(bx) FlyBase G32856.1 CGACGAGTCACAATTTTATATATGCTGTGATAAATGCCAGGATTGGTTTCATGGCCGTTGCGTTGGAATACTTCAGAGCGAAGC 107 235167 0.732358486 14 95 945 0.888888889 1.572096768 0.023809524 0.177570093 0.301587302 107 12 2 112 3L:235106-235189 8 E(bx) FBtr0332101|FBtr0332101|FBtr0332101 233924|233924|233924 236879|236879|236879 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 235100 235190 3'utr E(bx) FlyBase G24845.1 ACGACGAGTCACAATTTTATATATGCTGTGATAAATGCCAGGATTGGTTTCATGGCCGTTGCGTTGGAATACTTCAGAGCGAAGCAGAGTT 82 235167 0.990608586 14 71 733 0.846153846 1.439332694 0.053846154 0.426829268 0.638461538 82 17 3 110 3L:235100-235190 8 84 1427 FBgn0000541 5641.79 79.62333333 122.1466667 0.014888892 1.054967137 0.68769785 2 2 2 0.25 dme-miR-8-3p 8mer-A1 CAGTATTA 3L 235287 235294 - 3L_235287_235294_- 0.617907564 0.616876971 0.617392268 0.000728744 E(bx) FBtr0332101 233924 236879 3L - 235257 235315 3'utr E(bx) FlyBase G32859.1 TTGGTTCCATGGGGATTGTGTCAGTATTACCGAGGAAGCTTCTAAAAAACTATCGGAGT 76 235295 0.983374433 8 72 541 0.941860465 1.908485019 0.546511628 0.105263158 0.209302326 76 5 0 81 3L:235257-235315 8 E(bx) FBtr0332101 233924 236879 CAGTATTA 8mer-A1 dme-miR-8-3p 3L - 235271 235340 3'utr E(bx) FlyBase G24848.1 ACGTGGGGTGCGACTTGTGCAGCAATTGGTTCCATGGGGATTGTGTCAGTATTACCGAGGAAGCTTCTAA 46 235295 0.708453638 9 40 329 0.811594203 1.146128036 0.608695652 0.391304348 0.594202899 46 10 3 56 3L:235271-235340 8 56.5 1428 FBgn0000541 5641.79 79.62333333 122.1466667 0.010014552 0.709590991 0.462558673 1 1 1 0.25 dme-miR-1012-3p 6mer3-8 TTGACT 3L 2368137 2368142 - 3L_2368137_2368142_- 0.930652237 0.958385924 0.944519081 0.019610687 CG1317 FBtr0072901|FBtr0300773|FBtr0345587 2368012|2368012|2367841 2368638|2368638|2368638 3L - 2368067 2368154 3'utr CG1317 FlyBase G33671.2 TTGTATGATATTTTGACTTCCGCCACATCCTTACAAGCACTTACAGAACTAAACGATGGGCAGCGATTAAACCTTGTATTAGAGACGT 16 2368137 0.807679161 9 14 96 0.954545455 1.322219295 0.181818182 0.375 0.545454545 16 1 0 21 3L:2368067-2368154 6 CG1317 FBtr0300773|FBtr0345587|FBtr0072901 2368012|2367841|2368012 2368638|2368638|2368638 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 2368070 2368145 3'utr CG1317 FlyBase G25464.1 ATTTTGACTTCCGCCACATCCTTACAAGCACTTACAGAACTAAACGATGGGCAGCGATTAAACCTTGTATTAGAGA 6 2368137 0.982231392 5 6 41 1 1.041392685 0.090909091 0.333333333 0.636363636 6 0 0 11 3L:2368070-2368145 6 6 1429 FBgn0035333 712.6366667 22.14333333 33.55333333 0.008419438 0.270961915 0.178819789 -5 -5 -5 0.25 dme-miR-282-5p 7mer-A1 GAGGCTA 3L 2368550 2368556 - 3L_2368550_2368556_- 0.59194969 0.589496327 0.590723008 0.001734816 CG1317 FBtr0072901 2368012 2368638 3L - 2368533 2368575 3'utr CG1317 FlyBase G33673.1 AATAAATTATCAGCTCATGGAGGCTATTAGGTTCTCACGTTTA 129 2368558 0.913325701 6 126 996 0.981707317 1.90579588 0.018292683 0.209302326 0.37804878 129 2 1 161 3L:2368533-2368575 7 CG1317 FBtr0072901 2368012 2368638 GAGGCTA 7mer-A1 dme-miR-282-5p 3L - 2368531 2368595 3'utr CG1317 FlyBase G25466.1 GCGACAGGAGGAGGGGAATCAATAAATTATCAGCTCATGGAGGCTATTAGGTTCTCACGTTTAAA 59 2368558 0.982214949 5 57 415 0.99009901 2 0.02970297 0.474576271 0.693069307 59 1 0 100 3L:2368531-2368595 7 92 1430 FBgn0035333 712.6366667 22.14333333 33.55333333 0.129098044 4.15474936 2.741903437 2 2 2 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 23749013 23749019 + 3L_23749013_23749019_+ 0.795690403 0.795954304 0.795822354 0.000186605 CG17698 FBtr0111166|FBtr0111166|FBtr0111166|FBtr0333913|FBtr0333913|FBtr0333913|FBtr0333914|FBtr0333914|FBtr0333914|FBtr0333912|FBtr0333912|FBtr0333912 23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858 23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058 3L + 23748928 23749036 3'utr CG17698 FlyBase G32572.1 TTGAATTTGACAGTTTCCAAAAGCCAAACACTTGAAATACTTTAAAATATTTAATTATTAGTGATTAAATTTATGTATATTTTTTTGTGATAAAAATAAATTTAGAATA 92 23749011 0.983716914 20 80 1000 0.865384615 1.255272505 0.009615385 0.130434783 0.230769231 92 10 4 90 3L:23748928-23749036 7 CG17698 FBtr0333912|FBtr0333912|FBtr0333912|FBtr0333914|FBtr0333914|FBtr0333914|FBtr0333913|FBtr0333913|FBtr0333913|FBtr0111166|FBtr0111166|FBtr0111166 23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858 23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 23748896 23749045 3'utr CG17698 FlyBase G24619.1 TTTCATAGAACAAAAAAACCAATTTTTTATTTTTGAATTTGACAGTTTCCAAAAGCCAAACACTTGAAATACTTTAAAATATTTAATTATTAGTGATTAAATTTATGTATATTTTTTTGTGATAAAAATAAATTTAGAATATTATAAAGT 80 23749011 0.993574972 18 72 894 0.90990991 1.527200119 0.036036036 0.3125 0.504504505 80 8 2 101 3L:23748896-23749045 7 76 1431 FBgn0040056 619.7966667 30.24 46.48666667 0.12262086 2.513227513 1.634877384 2 2 2 0.25 dme-miR-263a-5p 6mer3-8 GTGCCA 3L 2408753 2408758 + 3L_2408753_2408758_+ 0.877219268 0.892043717 0.884631493 0.010482434 CG45186 FBtr0345113|FBtr0345115|FBtr0345114 2408340|2408340|2408340 2409103|2409103|2409103 3L + 2408726 2408778 3'utr CG45186 FlyBase G27311.1 AATTAATTGTTAATTTGACTGCAACTTGTGCCAATGATTTTTATACGTTTACT 71 2408754 0.824988414 11 69 619 0.977777778 1.643452676 0.022222222 0.23943662 0.4 71 1 1 88 3L:2408726-2408778 6 CG45186 FBtr0345113|FBtr0345115|FBtr0345114 2408340|2408340|2408340 2409103|2409103|2409103 GTGCCA 6mer3-8 dme-miR-263a-5p 3L + 2408696 2408771 3'utr CG45186 FlyBase G20674.1 CTTTAACACAGTTTCCTCGTTTTCCTTCTTAATTAATTGTTAATTTGACTGCAACTTGTGCCAATGATTTTTATAC 65 2408754 0.886445758 11 61 558 0.966666667 1.638489257 0 0.292307692 0.488888889 65 2 1 87 3L:2408696-2408771 6 60 1432 FBgn0266696 1930.986667 36.99 56.66666667 0.031072198 1.622060016 1.058823529 -1 -1 -1 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 2464736 2464741 + 3L_2464736_2464741_+ 0.851110259 0.854506239 0.852808249 0.002401264 CG45186 FBtr0345103|FBtr0345085|FBtr0345087|FBtr0345110|FBtr0345092|FBtr0345111|FBtr0345100|FBtr0345094|FBtr0345099|FBtr0345096|FBtr0345109|FBtr0345088|FBtr0345102|FBtr0345095 2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302 2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849 3L + 2464713 2464762 3'utr CG45186 FlyBase G27342.1 TTATTTACATTTAAAAACGAATTGTACCTTAAACGGAATTATATTATGAT 276 2464735 0.772560124 8 269 1579 0.968299712 2.049218023 0.18443804 0.195652174 0.360230548 276 9 2 336 3L:2464713-2464762 6 CG45186 FBtr0345099|FBtr0345087|FBtr0345110|FBtr0345094|FBtr0345103|FBtr0345109|FBtr0345095|FBtr0345092|FBtr0345100|FBtr0345088|FBtr0345111|FBtr0345102|FBtr0345085|FBtr0345096 2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302|2464302 2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849|2464849 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 2464715 2464800 3'utr CG45186 FlyBase G20700.1 ATTTACATTTAAAAACGAATTGTACCTTAAACGGAATTATATTATGATGAGTATGTATTACATTTATTATTATTATTGTAATATTT 181 2464735 0.966755891 7 180 978 0.996363636 2.437750563 0.250909091 0.397790055 0.603636364 181 1 0 274 3L:2464715-2464800 6 222.5 1433 FBgn0266696 1930.986667 36.99 56.66666667 0.115226068 6.015139227 3.926470588 1 1 1 0.25 dme-miR-263a-5p 7mer-m8 GTGCCAT 3L 2492103 2492109 + 3L_2492103_2492109_+ 0.658975042 0.658972788 0.658973915 1.56E-06 CG1146 FBtr0344219|FBtr0072921|FBtr0072923|FBtr0072922 2492069|2492069|2492069|2492069 2492613|2492613|2492613|2492613 3L + 2492089 2492160 3'utr CG1146 FlyBase G27354.1 AGGAACGTTTTATAGTGCCATCCCCCAGGGTCAGATGGAACAACCAGGTGAACTCCCATCCCAACCAGGCAT 35 2492107 0.807531554 7 33 140 0.953488372 1.612783857 0.186046512 0.228571429 0.372093023 35 2 0 41 3L:2492089-2492160 7 CG1146 FBtr0072923|FBtr0072922|FBtr0344219|FBtr0072921 2492069|2492069|2492069|2492069 2492613|2492613|2492613|2492613 GTGCCAT 7mer-m8 dme-miR-263a-5p 3L + 2492088 2492124 3'utr CG1146 FlyBase G20706.1 AAGGAACGTTTTATAGTGCCATCCCCCAGGGTCAGAT 13 2492106 0.802836265 3 13 66 1 1.322219295 0.285714286 0.461538462 0.666666667 13 0 0 21 3L:2492088-2492124 7 17 1434 FBgn0035346 752.39 49.49 76.20666667 0.022594665 0.343503738 0.223077596 -4 -3 -3.5 0.25 dme-miR-79-3p 8mer-A1 TAGCTTTA 3L 2507173 2507180 - 3L_2507173_2507180_- 0.612001047 0.614815651 0.613408349 0.001990293 Spn FBtr0304620|FBtr0304614|FBtr0304619 2506569|2505243|2505243 2508306|2508306|2508306 3L - 2507159 2507248 3'utr Spn FlyBase G33690.1 GGAAGCAAGCAGCTTCAAGAGCGATTTCTATTCGTTAGCAAGTATGTCTGTGTGAATGGGCGTGATTGTAGCTTTAATTTCAATTTACTT 161 2507182 0.825294478 11 156 1527 0.972972973 1.653212514 0.324324324 0.124223602 0.237837838 161 2 3 180 3L:2507159-2507248 8 Spn FBtr0304619|FBtr0304614|FBtr0304620 2505243|2505243|2506569 2508306|2508306|2508306 TAGCTTTA 8mer-A1 dme-miR-79-3p 3L - 2507158 2507246 3'utr Spn FlyBase G25473.3 AAGCAAGCAGCTTCAAGAGCGATTTCTATTCGTTAGCAAGTATGTCTGTGTGAATGGGCGTGATTGTAGCTTTAATTTCAATTTACTTT 124 2507182 0.797884509 15 122 1181 0.985221675 2 0.325123153 0.475806452 0.679802956 124 2 1 200 3L:2507158-2507246 8 89.5 1435 FBgn0010905 2101.51 31.02666667 47.43666667 0.042588425 2.884615385 1.886726161 2 2 2 0.25 dme-miR-33-5p 8mer-A1 CAATGCAA 3L 2507289 2507296 - 3L_2507289_2507296_- 0.48100554 0.479037841 0.480021691 0.001391374 Spn FBtr0304620|FBtr0304614|FBtr0304619 2506569|2505243|2505243 2508306|2508306|2508306 3L - 2507265 2507316 3'utr Spn FlyBase G33691.1 AGCAGTTTCAGCAGCCAAATCAATGCAAAGTGTCCACCCAAATTTGTTAAGC 148 2507297 0.962321248 3 144 624 0.976744186 2.225309282 0.081395349 0.135135135 0.255813953 148 4 0 168 3L:2507265-2507316 8 Spn FBtr0304619|FBtr0304614|FBtr0304620 2505243|2505243|2506569 2508306|2508306|2508306 CAATGCAA 8mer-A1 dme-miR-33-5p 3L - 2507270 2507340 3'utr Spn FlyBase G25474.1 TGAAATGCAGTCGGTTACATTTCGAGCAGTTTCAGCAGCCAAATCAATGCAAAGTGTCCACCCAAATTTGT 59 2507297 0.945031464 5 55 225 0.954022989 1.441956838 0.057471264 0.406779661 0.597701149 59 2 2 83 3L:2507270-2507340 8 102 1436 FBgn0010905 2101.51 31.02666667 47.43666667 0.048536528 3.287494628 2.150235402 1 1 1 0.25 dme-miR-317-5p 6mer2-7 TATCCC 3L 2507473 2507478 - 3L_2507473_2507478_- 0.997139734 0.978506724 0.987823229 0.013175521 Spn FBtr0304620|FBtr0304614|FBtr0304619 2506569|2505243|2505243 2508306|2508306|2508306 3L - 2507464 2507494 3'utr Spn FlyBase G33693.1 ACGGAACGTACTGTACTATCCCCTAAAAATT 14 2507481 0.58831537 5 14 71 1 1.255272505 0.222222222 0.214285714 0.388888889 14 0 0 18 3L:2507464-2507494 6 Spn FBtr0304619|FBtr0304614|FBtr0304620 2505243|2505243|2506569 2508306|2508306|2508306 TATCCC 6mer2-7 dme-miR-317-5p 3L - 2507416 2507497 3'utr Spn FlyBase G25475.1 TTTACGGAACGTACTGTACTATCCCCTAAAAATTAATGCTAAAGTATTGTACTGTATGCTATGCCTGAAAGTCATTTAAGTA 17 2507477 0.868674496 10 16 115 0.956521739 1.342422681 0.173913043 0.235294118 0.434782609 17 1 0 22 3L:2507416-2507497 6 10.5 1437 FBgn0010905 2101.51 31.02666667 47.43666667 0.004996407 0.338418565 0.221347762 3 -1 1 0.25 dme-miR-1012-3p 6mer2-7 TGACTA 3L 2507570 2507575 - 3L_2507570_2507575_- 0.724870895 0.99862765 0.861749273 0.193575219 Spn FBtr0304620|FBtr0304614|FBtr0304619 2506569|2505243|2505243 2508306|2508306|2508306 3L - 2507498 2507575 3'utr Spn FlyBase G33694.1 TGACTAGCGCATATTCAATAATATTCAATTCTAGATATACATATACATATGTGTGTGCAACAGTTATATGTCAAGACA 9 2507554 0.990493938 6 8 77 0.888888889 0.903089987 0 0 0 9 1 0 8 3L:2507498-2507575 6 Spn FBtr0304619|FBtr0304614|FBtr0304620 2505243|2505243|2506569 2508306|2508306|2508306 TGACTA 6mer2-7 dme-miR-1012-3p 3L - 2507537 2507597 3'utr Spn FlyBase G25476.1 ATTATTAATCTGTGTAATTTAATGACTAGCGCATATTCAATAATATTCAATTCTAGATATA 9 2507575 0.986858617 5 8 74 0.933333333 1.146128036 0.133333333 0.333333333 0.6 9 1 0 14 3L:2507537-2507597 6 3.5 1438 FBgn0010905 2101.51 31.02666667 47.43666667 0.001665469 0.112806188 0.073782587 -21 0 -10.5 0.25 dme-miR-8-3p 6mer3-8 CAGTAT 3L 2508251 2508256 - 3L_2508251_2508256_- 0.655739916 0.983713663 0.819726789 0.231912498 Spn FBtr0304617|FBtr0345046|FBtr0304613|FBtr0304620|FBtr0304618|FBtr0304616|FBtr0304615|FBtr0304621|FBtr0304614|FBtr0304619|FBtr0345047 2508045|2508045|2508045|2506569|2508045|2508045|2508045|2508045|2505243|2505243|2508045 2509405|2508306|2508306|2508306|2508306|2508306|2508306|2508306|2508306|2508306|2508306 3L - 2508214 2508308 stop_codon Spn FlyBase G33699.1 AGTTGAATTCTAGTTGATAAGCATCAAAGTAGCCAAAAACCAAAAGCATACGCAGTATATATTGTAGTCTATATACATACATGCATACACAACAC 30 2508260 0.97581507 12 29 188 0.971428571 1.531478917 0.057142857 0.166666667 0.285714286 30 1 0 34 3L:2508214-2508308 6 Spn FBtr0304619|FBtr0345047|FBtr0304621|FBtr0304614|FBtr0304620|FBtr0304618|FBtr0304617|FBtr0304616|FBtr0304615|FBtr0345046|FBtr0304613 2505243|2508045|2508045|2505243|2506569|2508045|2508045|2508045|2508045|2508045|2508045 2508306|2508306|2508306|2508306|2508306|2508306|2509405|2508306|2508306|2508306|2508306 CAGTAT 6mer3-8 dme-miR-8-3p 3L - 2508213 2508306 5'utr Spn FlyBase G25481.1 TTGAATTCTAGTTGATAAGCATCAAAGTAGCCAAAAACCAAAAGCATACGCAGTATATATTGTAGTCTATATACATACATGCATACACAACACA 16 2508246 0.976267093 10 14 89 0.782608696 1.255272505 0.043478261 0.375 0.565217391 16 5 0 18 3L:2508213-2508306 6 15.5 1439 FBgn0010905 2101.51 31.02666667 47.43666667 0.007375649 0.499570262 0.326751458 4 -10 -3 0.25 dme-miR-283-5p 6mer3-8 TGATAT 3L 25115033 25115038 - 3L_25115033_25115038_- 0.998673433 0.985591866 0.992132649 0.009250017 MED21 FBtr0113739|FBtr0113740 25114922|25114922 25115218|25115218 3L - 25114923 25115180 3'utr MED21 FlyBase G39507.1 AAATTTAAGATAATGTATTTATTGCATTTTCGTTCGTGTTTACAGATCAAATGGGTTTTAGTATATACATATTGTTTTTATAAGTAAAGTATTTTAGCTTAATTTAGACCTAAACCATTTTGAACAGCACCTCTGACCTCGTTGATATAATTTTTATAATAATTAATTATAGTTTTAAGTTATAAAAAAAACTATATATACTTACACGTACCCCACTTTGGATTTTATGAACAAATTAAATTTATGTGCTCTAAAATA 233 25115047 0.985169696 44 212 1731 0.918149466 1.809559715 0.149466192 0.175965665 0.316725979 233 20 3 258 3L:25114923-25115180 6 MED21 FBtr0113740|FBtr0113739 25114922|25114922 25115218|25115218 TGATAT 6mer3-8 dme-miR-283-5p 3L - 25115017 25115176 3'utr MED21 FlyBase G29845.1 TTAAGATAATGTATTTATTGCATTTTCGTTCGTGTTTACAGATCAAATGGGTTTTAGTATATACATATTGTTTTTATAAGTAAAGTATTTTAGCTTAATTTAGACCTAAACCATTTTGAACAGCACCTCTGACCTCGTTGATATAATTTTTATAATAATT 141 25115047 0.725898796 26 133 967 0.9543379 1.475048246 0.210045662 0.34751773 0.579908676 141 4 6 209 3L:25115017-25115176 6 117.5 1440 FBgn0040020 302.5833333 44.85333333 68.74333333 0.388322776 2.619649227 1.709256655 9 9 9 0.25 "dme-miR-995-3p,dme-miR-998-3p" 6mer2-7 GGTGCT 3L 25115050 25115055 + 3L_25115050_25115055_+ 0.96855316 0.901584711 0.935068935 0.04735388 Set1 FBtr0302246|FBtr0113871|FBtr0113870|FBtr0302245|FBtr0302243|FBtr0302248|FBtr0302247|FBtr0302244|FBtr0113869 25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896 25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180 3L + 25115002 25115088 3'utr Set1 FlyBase G32671.1 CTTAAAACTATAATTAATTATTATAAAAATTATATCAACGAGGTCAGAGGTGCTGTTCAAAATGGTTTAGGTCTAAATTAAGCTAAA 31 25115056 0.978840637 12 30 203 0.970588235 1.51851394 0.235294118 0.096774194 0.176470588 31 1 0 33 3L:25115002-25115088 6 Set1 FBtr0302248|FBtr0302247|FBtr0302244|FBtr0113869|FBtr0302246|FBtr0113870|FBtr0113871|FBtr0302245|FBtr0302243 25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896 25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180 GGTGCT 6mer2-7 "dme-miR-995-3p,dme-miR-998-3p" 3L + 25115023 25115089 3'utr Set1 FlyBase G24703.1 TATAAAAATTATATCAACGAGGTCAGAGGTGCTGTTCAAAATGGTTTAGGTCTAAATTAAGCTAAAA 31 25115054 0.702702687 11 27 162 0.88 1.342422681 0.26 0.451612903 0.66 31 5 1 44 3L:25115023-25115089 6 21 1441 FBgn0040022 1603.58 36.14666667 55.41666667 0.013095698 0.580966433 0.378947368 -6 -4 -5 0.25 dme-bantam-3p 6mer3-8 TGATCT 3L 25115132 25115137 + 3L_25115132_25115137_+ 0.968485683 0.948785318 0.9586355 0.013930286 Set1 FBtr0302246|FBtr0113871|FBtr0113870|FBtr0302245|FBtr0302243|FBtr0302248|FBtr0302247|FBtr0302244|FBtr0113869 25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896 25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180 3L + 25115100 25115180 3'utr Set1 FlyBase G32672.1 ATAAAAACAATATGTATATACTAAAACCCATTTGATCTGTAAACACGAACGAAAATGCAATAAATACATTATCTTAAATTT 124 25115131 0.755210737 15 121 710 0.966666667 2.161368002 0.06 0.177419355 0.32 124 5 0 145 3L:25115100-25115180 6 Set1 FBtr0302248|FBtr0302247|FBtr0302244|FBtr0113869|FBtr0302246|FBtr0113870|FBtr0113871|FBtr0302245|FBtr0302243 25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896|25114896 25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180|25115180 TGATCT 6mer3-8 dme-bantam-3p 3L + 25115108 25115166 3'utr Set1 FlyBase G24704.1 AATATGTATATACTAAAACCCATTTGATCTGTAAACACGAACGAAAATGCAATAAATAC 105 25115131 0.99295358 6 103 573 0.986842105 1.875061263 0.059210526 0.361904762 0.559210526 105 1 1 150 3L:25115108-25115166 6 102 1442 FBgn0040022 1603.58 36.14666667 55.41666667 0.063607678 2.821836961 1.840601504 1 1 1 0.25 dme-miR-999-3p 6mer3-8 AGTTAA 3L 2555890 2555895 - 3L_2555890_2555895_- 0.681679136 0.988516822 0.835097979 0.216967018 msn FBtr0333364|FBtr0333362|FBtr0072959|FBtr0333365|FBtr0072956|FBtr0072958|FBtr0072957|FBtr0333363 2555772|2555772|2555772|2554845|2554845|2554845|2554845|2555772 2556555|2556555|2556555|2556555|2556555|2556555|2556555|2556555 3L - 2555889 2555929 3'utr msn FlyBase G33742.1 TGTCGTTTCACGATTGTGTATGATTTCGCTTACAAGTTAAA 10 2555908 0.796792999 5 10 86 1 1.204119983 0.1875 0.4 0.625 10 0 0 16 3L:2555889-2555929 6 msn FBtr0072957|FBtr0333363|FBtr0072956|FBtr0072958|FBtr0072959|FBtr0333365|FBtr0333364|FBtr0333362 2554845|2555772|2554845|2554845|2555772|2554845|2555772|2555772 2556555|2556555|2556555|2556555|2556555|2556555|2556555|2556555 AGTTAA 6mer3-8 dme-miR-999-3p 3L - 2555877 2555937 3'utr msn FlyBase G25511.1 ATTTCAAATGTCGTTTCACGATTGTGTATGATTTCGCTTACAAGTTAAACTTAAGTTGAAA 13 2555908 0.70765889 7 12 118 1 1.278753601 0.157894737 0.384615385 0.578947368 13 0 0 19 3L:2555877-2555937 6 2.5 1443 FBgn0010909 7320.6 159.8166667 245.3066667 0.000341502 0.015642924 0.010191325 13 13 13 0.25 dme-miR-33-5p 8mer-A1 CAATGCAA 3L 2595437 2595444 + 3L_2595437_2595444_+ 0.634298091 0.532432967 0.583365529 0.072029503 dos FBtr0072926|FBtr0072927 2595045|2595045 2595590|2595590 3L + 2595284 2595471 3'utr dos FlyBase G27392.1 ATTTCTGTGTGCTGTTTTGAATCTGTAATCTGTAACCCGTATCTGAATCTATGTCGTATTCGTATTTAAATCGTGCTTCCAACACTTCCATGTTTATTGTTAAGCTTCGGAATCAAAATGTAACCATGACAAACGATCTTAGTGCTAATTTTACAATGCAAACAATTATTTTATATACGCAAGCGAAA 142 2595424 0.884786622 36 132 1197 0.933333333 1.447158031 0.116666667 0.225352113 0.388888889 142 7 5 168 3L:2595284-2595471 8 dos FBtr0072926|FBtr0072927 2595045|2595045 2595590|2595590 CAATGCAA 8mer-A1 dme-miR-33-5p 3L + 2595373 2595472 3'utr dos FlyBase G20739.2 ATGTTTATTGTTAAGCTTCGGAATCAAAATGTAACCATGACAAACGATCTTAGTGCTAATTTTACAATGCAAACAATTATTTTATATACGCAAGCGAAAT 49 2595425 0.711057503 18 44 309 0.941176471 1.329058719 0.088235294 0.285714286 0.485294118 49 2 2 64 3L:2595373-2595472 8 12.5 1444 FBgn0016794 1172.68 41.23 62.95666667 0.010659344 0.303177298 0.198549267 13 12 12.5 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3L 2641033 2641038 + 3L_2641033_2641038_+ 0.595458666 0.635230686 0.615344676 0.028123051 MEP-1 FBtr0072931|FBtr0072933|FBtr0290340|FBtr0072936|FBtr0072934|FBtr0072932|FBtr0072935 2641015|2641015|2641015|2641015|2641015|2641015|2641015 2641984|2641984|2641984|2641984|2641984|2641984|2641984 3L + 2641014 2641143 stop_codon MEP-1 FlyBase G27420.1 TAAAGAGCATGTTGGATCAACCAAAAACCTAATCTCGCAACGTTTGCAGCATTGACAGCGCTTTAACATTAGTTTCGTTTTTAAGCCGAACGCGACATTGGCGCCTCACGGTCCCGCTCCTTTACTTCTG 69 2641043 0.825875524 18 63 353 0.914634146 1.273001272 0.073170732 0.130434783 0.268292683 69 4 3 75 3L:2641014-2641143 6 MEP-1 FBtr0072935|FBtr0072932|FBtr0072934|FBtr0072936|FBtr0290340|FBtr0072933|FBtr0072931 2641015|2641015|2641015|2641015|2641015|2641015|2641015 2641984|2641984|2641984|2641984|2641984|2641984|2641984 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 2641010 2641088 stop_codon MEP-1 FlyBase G20763.1 AGATTAAAGAGCATGTTGGATCAACCAAAAACCTAATCTCGCAACGTTTGCAGCATTGACAGCGCTTTAACATTAGTTT 21 2641057 0.957728059 10 19 106 0.9375 1.477121255 0.15625 0.333333333 0.5625 21 2 0 30 3L:2641010-2641088 6 23.5 1445 FBgn0035357 2000.076667 48.38333333 74.09333333 0.01174955 0.485704444 0.317167536 -10 -24 -17 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 3L 2641556 2641561 + 3L_2641556_2641561_+ 0.891866598 0.904634886 0.898250742 0.009028552 MEP-1 FBtr0072931|FBtr0072933|FBtr0290340|FBtr0072936|FBtr0072934|FBtr0072932|FBtr0072935 2641015|2641015|2641015|2641015|2641015|2641015|2641015 2641984|2641984|2641984|2641984|2641984|2641984|2641984 3L + 2641526 2641602 3'utr MEP-1 FlyBase G27423.1 ATTTATACGAGAACTACGAGTATCCAAATGTGTGTTGCAGTATGTATATACATTTTGAAAAGGTCCCCGCCCCGCAG 28 2641556 0.972607606 9 27 189 1 1.544068044 0.228571429 0.214285714 0.371428571 28 0 0 35 3L:2641526-2641602 6 MEP-1 FBtr0072935|FBtr0072932|FBtr0072934|FBtr0072936|FBtr0290340|FBtr0072933|FBtr0072931 2641015|2641015|2641015|2641015|2641015|2641015|2641015 2641984|2641984|2641984|2641984|2641984|2641984|2641984 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 2641518 2641578 3'utr MEP-1 FlyBase G20765.2 ACTAAACTATTTATACGAGAACTACGAGTATCCAAATGTGTGTTGCAGTATGTATATACAT 15 2641556 0.980043341 5 13 97 0.95 1.278753601 0.15 0.214285714 0.45 14 1 0 19 3L:2641518-2641578 6 15 1446 FBgn0035357 2000.076667 48.38333333 74.09333333 0.007499713 0.310024113 0.202447364 0 0 0 0.25 dme-miR-1012-3p 6mer3-8 TTGACT 3L 27083335 27083340 - 3L_27083335_27083340_- 0.646839821 0.589033882 0.617936851 0.040874944 CG40228 FBtr0113841 27082089 27083460 3L - 27083316 27083426 3'utr CG40228 FlyBase G39587.1 TAAATTGCTAGAGCCCTCTAAATTATACCATAAAATAAGTTTAATACAAAAAATTTAGCATAATAGCGAGATTGAAATAAACATTTTTGACTTATTAAAATAAGCTGAACC 48 27083340 0.808217654 12 44 415 0.98245614 1.447158031 0.052631579 0.14893617 0.298245614 47 0 1 56 3L:27083316-27083426 6 CG40228 FBtr0113841 27082089 27083460 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 27083302 27083378 3'utr CG40228 FlyBase G29908.1 AAAAATTTAGCATAATAGCGAGATTGAAATAAACATTTTTGACTTATTAAAATAAGCTGAACCCATGAAATTCTAAC 31 27083340 0.988977688 9 29 281 0.958333333 1.361727836 0.041666667 0.387096774 0.604166667 31 1 1 46 3L:27083302-27083378 6 31.5 1447 FBgn0063670 550.58 55.34333333 84.84333333 0.057212394 0.569174246 0.371272542 0 0 0 0.25 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA 3L 27156053 27156060 + 3L_27156053_27156060_+ 0.563987999 0.510826125 0.537407062 0.03759114 vtd FBtr0344093 27147810 27157999 3L + 27156035 27156070 3'utr vtd FlyBase G32749.1 ATGAAACCGATGAGCAATTTGAAGAACGTGTTTTAA 8 27156045 0.80493186 3 6 37 0.666666667 0.77815125 0.333333333 0.125 0.222222222 8 3 0 6 3L:27156035-27156070 8 vtd FBtr0344093 27147810 27157999 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p 3L + 27156035 27156094 3'utr vtd FlyBase G24766.1 ATGAAACCGATGAGCAATTTGAAGAACGTGTTTTAAACAAGAGAGCCGCCCACCTTTTTA 6 27156053 0.965967021 5 5 30 0.9 0.954242509 0.4 0.333333333 0.6 6 1 0 9 3L:27156035-27156094 8 5.5 1448 FBgn0260987 2370.69 125.3933333 192.4 0.00232 0.043861981 0.028586279 8 0 4 0.25 dme-miR-8-3p 7mer-A1 AGTATTA 3L 2787007 2787013 - 3L_2787007_2787013_- 0.792309559 0.444735676 0.618522618 0.245771862 Tet FBtr0309120|FBtr0309118|FBtr0333880|FBtr0309119|FBtr0309117|FBtr0333881 2786205|2786485|2786205|2786485|2786205|2786485 2788549|2788549|2788549|2788549|2788549|2788549 3L - 2786963 2787120 3'utr Tet FlyBase G33825.1 TATATTTATTTATGCGCAAATCGACGGCAAATAAGGGGTTTAATTCTAGTTATTATTATTTCTGCAAGATTTAGTTTGAAAAACCCAAAAAGACTCGAAACCAATCAAGTATTAAGCACTAAACAACCAACAACTAATACTAAACTTATTTGCCTAAC 147 2787016 0.977716629 23 139 870 0.950819672 1.763427994 0.092896175 0.19047619 0.349726776 147 7 2 174 3L:2786963-2787120 7 Tet FBtr0309117|FBtr0333881|FBtr0333880|FBtr0309119|FBtr0309120|FBtr0309118 2786205|2786485|2786205|2786485|2786205|2786485 2788549|2788549|2788549|2788549|2788549|2788549 AGTATTA 7mer-A1 dme-miR-8-3p 3L - 2786996 2787111 3'utr Tet FlyBase G25576.3 TTATGCGCAAATCGACGGCAAATAAGGGGTTTAATTCTAGTTATTATTATTTCTGCAAGATTTAGTTTGAAAAACCCAAAAAGACTCGAAACCAATCAAGTATTAAGCACTAAACA 80 2787016 0.942573712 15 64 432 0.831858407 1.371067862 0.123893805 0.35 0.539823009 80 16 3 94 3L:2786996-2787111 7 64.5 1449 FBgn0263392 3136.83 38.19 58.6 0.02056216 1.688923802 1.100682594 3 3 3 0.25 dme-miR-305-3p 7mer-A1 TGTGCCA 3L 2788070 2788076 - 3L_2788070_2788076_- 0.769083354 0.765253144 0.767168249 0.002708431 Tet FBtr0309120|FBtr0309118|FBtr0333880|FBtr0309119|FBtr0309117|FBtr0333881 2786205|2786485|2786205|2786485|2786205|2786485 2788549|2788549|2788549|2788549|2788549|2788549 3L - 2787963 2788094 3'utr Tet FlyBase G33832.1 TAAATGCGTTTGATTTAGTGTGCCATAGGAGGAGAATTAGAAGAGTTCCCGGAAAAAGAGTTGCAGTTGAAAGAGTACAGTTGACGCTGCCGGGCCAGAGTTGTCACCATTCCACAAGAAAATATCCCAGAT 84 2788076 0.971175122 17 81 470 0.967741935 1.954242509 0.344086022 0.071428571 0.161290323 84 3 0 90 3L:2787963-2788094 7 Tet FBtr0309117|FBtr0333881|FBtr0333880|FBtr0309119|FBtr0309120|FBtr0309118 2786205|2786485|2786205|2786485|2786205|2786485 2788549|2788549|2788549|2788549|2788549|2788549 TGTGCCA 7mer-A1 dme-miR-305-3p 3L - 2788029 2788088 3'utr Tet FlyBase G25581.2 CGTTTGATTTAGTGTGCCATAGGAGGAGAATTAGAAGAGTTCCCGGAAAAAGAGTTGCAG 37 2788076 0.965970725 7 36 220 0.96969697 1.806179974 0.5 0.594594595 0.772727273 37 2 0 64 3L:2788029-2788088 7 49 1450 FBgn0263392 3136.83 38.19 58.6 0.015620866 1.283058392 0.836177474 0 0 0 0.25 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3L 304240 304245 + 3L_304240_304245_+ 0.89774136 0.818742386 0.858241873 0.055860729 RhoGEF3 FBtr0333956|FBtr0333962|FBtr0333952 303882|303882|303882 304315|305292|305292 3L + 304219 304281 5'utr RhoGEF3 FlyBase G26760.1 ATATAAAAATGTCGCCGACTGCTAGTCTAAAATCCTGTCCATACTTGTAATTTTAGGTTACGT 166 304240 0.784507104 11 162 1013 0.98019802 2.29666519 0.04950495 0.198795181 0.341584158 166 4 0 198 3L:304219-304281 6 RhoGEF3 FBtr0333952|FBtr0333962|FBtr0333956 303882|303882|303882 305292|305292|304315 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3L + 304213 304282 5'utr RhoGEF3 FlyBase G20229.1 AGTTTTATATAAAAATGTCGCCGACTGCTAGTCTAAAATCCTGTCCATACTTGTAATTTTAGGTTACGTG 144 304240 0.764155675 9 138 859 0.966824645 2.309630167 0.037914692 0.347222222 0.55450237 144 7 0 204 3L:304213-304282 6 150 1451 FBgn0264707 2055.463333 66.05 101.8633333 0.072976247 2.271006813 1.472561275 0 0 0 0.25 dme-miR-1007-3p 6mer2-7 GAGCTT 3L 3051618 3051623 + 3L_3051618_3051623_+ 0.749460784 0.966926177 0.858193481 0.153771259 CG32485 FBtr0072985 3051513 3051765 3L + 3051479 3051637 stop_codon CG32485 FlyBase G27518.1 TACCTCATCCCCGACATCCTGCCAACGGACATGTAAGGCTTCCGCCACGAAATCAGCATCCGACGAGGCTTCTGCTAGGCGTAGACATATCTCCAAAGAGAACCGAAACCAGTACCTAAGTTTGCAAGGAGGCTTCTGAGAGCTTTTATCCAGTATAGT 52 3051614 0.954857614 13 52 241 1 1.770852012 0.338983051 0.134615385 0.237288136 52 0 0 59 3L:3051479-3051637 6 CG32485 FBtr0072985 3051513 3051765 GAGCTT 6mer2-7 dme-miR-1007-3p 3L + 3051481 3051642 stop_codon CG32485 FlyBase G20831.1 CCTCATCCCCGACATCCTGCCAACGGACATGTAAGGCTTCCGCCACGAAATCAGCATCCGACGAGGCTTCTGCTAGGCGTAGACATATCTCCAAAGAGAACCGAAACCAGTACCTAAGTTTGCAAGGAGGCTTCTGAGAGCTTTTATCCAGTATAGTACTCT 38 3051615 0.972591559 13 35 211 0.85 1.707570176 0.15 0.447368421 0.65 38 9 0 51 3L:3051481-3051642 6 15 1452 FBgn0052485 128.92 14.17333333 21.81 0.116351226 1.058325494 0.687757909 4 3 3.5 0.25 dme-miR-305-5p 8mer-m1 AGTACAAT 3L 3051708 3051715 + 3L_3051708_3051715_+ 0.564923282 0.56578233 0.565352806 0.000607405 CG32485 FBtr0072985 3051513 3051765 3L + 3051646 3051720 3'utr CG32485 FlyBase G27519.1 TGTAAATCGATGTGTTTAACAAGTTGATTGTAAAGCGTATTCTATTGGACACCACAACTATTAGTACAATGCTAA 34 3051706 0.982885938 8 30 229 0.875 1.243038049 0.05 0.147058824 0.275 34 4 1 35 3L:3051646-3051720 8 CG32485 FBtr0072985 3051513 3051765 AGTACAAT 8mer-m1 dme-miR-305-5p 3L + 3051679 3051719 3'utr CG32485 FlyBase G20832.1 AGCGTATTCTATTGGACACCACAACTATTAGTACAATGCTA 14 3051706 0.674387683 5 14 88 1 1.397940009 0 0.5 0.72 14 0 0 25 3L:3051679-3051719 8 20 1453 FBgn0052485 128.92 14.17333333 21.81 0.155134967 1.411100659 0.917010546 2 2 2 0.25 dme-bantam-3p 8mer-A1 TGATCTCA 3L 3056302 3056309 - 3L_3056302_3056309_- 0.57174116 0.583683734 0.577712447 0.008444623 CG32486 FBtr0073004 3055906 3056724 3L - 3056250 3056499 3'utr CG32486 FlyBase G33920.1 GCAGACGTAACGCGGTAGGTTGTAACCTAAGTTTAGTGTAGATTCGGCTACATTTTGTACATGAGATGAGATAGCGCCATTTTATGGAGACACCTTTCAATAGCTATGTTAACTCTACTGTTAGTGCTGGTGGCGAAATGGATACGATACGATGGACAAGACGACTGATGTGTGTTTGACTAGCGTTTAATGATCTCACAGGAAGGAGCCAGCCCACGCTAACGCGATAATACCGATAATAACCATAAAA 543 3056309 0.820477851 36 523 3349 0.963549921 2.005752329 0.272583201 0.136279926 0.256735341 543 18 5 608 3L:3056250-3056499 8 CG32486 FBtr0073004 3055906 3056724 TGATCTCA 8mer-A1 dme-bantam-3p 3L - 3056260 3056469 3'utr CG32486 FlyBase G25647.1 GTTTAGTGTAGATTCGGCTACATTTTGTACATGAGATGAGATAGCGCCATTTTATGGAGACACCTTTCAATAGCTATGTTAACTCTACTGTTAGTGCTGGTGGCGAAATGGATACGATACGATGGACAAGACGACTGATGTGTGTTTGACTAGCGTTTAATGATCTCACAGGAAGGAGCCAGCCCACGCTAACGCGATAATACCGATAAT 344 3056309 0.976287521 32 326 2093 0.955637708 1.868392503 0.210720887 0.398255814 0.617375231 344 18 6 517 3L:3056260-3056469 8 365 1454 FBgn0266918 501.6666667 25.67666667 39.09333333 0.727574751 14.21524082 9.336630286 0 0 0 0.25 dme-miR-252-5p 6mer3-8 GTACTT 3L 305714 305719 - 3L_305714_305719_- 0.680493345 0.69487569 0.687684517 0.010169893 fwd FBtr0072516 305391 306358 3L - 305697 305751 3'utr fwd FlyBase G32951.1 TTGAAATGTTTGAGTCGCTGTCCGCTGTGTTTGTACTTGCATATTTAACTAAGTA 33 305721 0.654926989 11 30 320 0.911111111 1.010723865 0.355555556 0.303030303 0.488888889 33 1 3 41 3L:305697-305751 6 fwd FBtr0072516 305391 306358 GTACTT 6mer3-8 dme-miR-252-5p 3L - 305677 305741 3'utr fwd FlyBase G24938.1 TGAGTCGCTGTCCGCTGTGTTTGTACTTGCATATTTAACTAAGTAAACGAAAAAATAAATCCCAA 22 305721 0.986996608 5 20 173 0.942857143 1.51851394 0.485714286 0.409090909 0.628571429 22 2 0 33 3L:305677-305741 6 23.5 1455 FBgn0004373 1952.316667 35.47333333 54.29333333 0.012036982 0.662469461 0.432833988 2 2 2 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3L 3090154 3090160 + 3L_3090154_3090160_+ 0.347881943 0.329163058 0.338522501 0.01323619 CG11486 FBtr0332113|FBtr0073000|FBtr0072998|FBtr0072994 3088301|3088301|3088301|3088301 3090406|3090406|3090406|3090406 3L + 3090128 3090173 3'utr CG11486 FlyBase G27541.1 AGTAGATGGTTCGTTTACCAGCTTAGTGTGATTTATACTTATTTTG 23 3090160 0.719582455 4 23 224 1 1.505149978 0.03125 0.217391304 0.4375 23 0 0 32 3L:3090128-3090173 7 CG11486 FBtr0332113|FBtr0072994|FBtr0072998|FBtr0073000 3088301|3088301|3088301|3088301 3090406|3090406|3090406|3090406 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 3090128 3090169 3'utr CG11486 FlyBase G20854.1 AGTAGATGGTTCGTTTACCAGCTTAGTGTGATTTATACTTAT 26 3090160 0.73747605 3 26 243 1 1.568201724 0 0.230769231 0.459459459 26 0 0 37 3L:3090128-3090169 7 24.5 1456 FBgn0035397 2018.183333 59.24333333 91.30666667 0.012139631 0.413548641 0.268326519 -6 -6 -6 0.25 dme-miR-14-3p 6mer3-8 AAGACT 3L 3090350 3090355 + 3L_3090350_3090355_+ 0.996667325 0.992913257 0.994790291 0.002654479 CG11486 FBtr0332113|FBtr0073000|FBtr0072998|FBtr0072994 3088301|3088301|3088301|3088301 3090406|3090406|3090406|3090406 3L + 3090328 3090370 3'utr CG11486 FlyBase G27542.1 AAATTATTGTGTACATCAACGTAAGACTAATTATTTAATTGAA 11 3090349 0.836169669 5 10 83 0.909090909 1 0.181818182 0 0 11 1 0 10 3L:3090328-3090370 6 CG11486 FBtr0332113|FBtr0072994|FBtr0072998|FBtr0073000 3088301|3088301|3088301|3088301 3090406|3090406|3090406|3090406 AAGACT 6mer3-8 dme-miR-14-3p 3L + 3090328 3090366 3'utr CG11486 FlyBase G20855.1 AAATTATTGTGTACATCAACGTAAGACTAATTATTTAAT 9 3090349 0.849205586 3 8 75 0.857142857 1.079181246 0 0.555555556 0.714285714 9 2 0 12 3L:3090328-3090366 6 9.5 1457 FBgn0035397 2018.183333 59.24333333 91.30666667 0.004707204 0.160355596 0.104044977 1 1 1 0.25 dme-miR-33-5p 7mer-m8 CAATGCA 3L 3115152 3115158 - 3L_3115152_3115158_- 0.644863709 0.628527369 0.636695539 0.011551509 prominin-like FBtr0073118|FBtr0306258 3114557|3114448 3115919|3115919 3L - 3115130 3115229 3'utr prominin-like FlyBase G33926.1 AAATATGATCCAAAATACCAAAACTGCCATTTTAATTTAGAAAAGAGCAGAGCACAGAGTTGGGAGTTATTCAATGCATTTAATGTATTTATTTTAGAAA 41 3115159 0.755576246 14 38 341 0.933333333 1.322219295 0.244444444 0.097560976 0.177777778 41 2 1 42 3L:3115130-3115229 7 prominin-like FBtr0306258|FBtr0073118 3114448|3114557 3115919|3115919 CAATGCA 7mer-m8 dme-miR-33-5p 3L - 3115138 3115224 3'utr prominin-like FlyBase G25655.1 TGATCCAAAATACCAAAACTGCCATTTTAATTTAGAAAAGAGCAGAGCACAGAGTTGGGAGTTATTCAATGCATTTAATGTATTTAT 23 3115159 0.860197531 9 23 182 1 1.579783597 0.289473684 0.391304348 0.631578947 23 0 0 38 3L:3115138-3115224 7 15.5 1458 FBgn0026189 6878.313333 173.88 267.93 0.002253459 0.089141937 0.057850931 1 1 1 0.25 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3L 3154257 3154263 + 3L_3154257_3154263_+ 0.473259825 0.469895604 0.471577715 0.002378849 BtbVII FBtr0307305|FBtr0307302|FBtr0332096|FBtr0307304 3153532|3153532|3153532|3153532 3154934|3154934|3154934|3155678 3L + 3154202 3154308 3'utr BtbVII FlyBase G27568.1 TTATTAGTGTTAATCGCGAACATCAAATGATTTGTAAGCAACTGCAGCTAAAAAGTGGTGCTGTGTGCCAGCAGCCGACACAAACCTTGCGGAATCCGCTCCATATT 24 3154228 0.973050746 10 24 140 1 1.414973348 0.153846154 0.083333333 0.153846154 24 0 0 26 3L:3154202-3154308 7 BtbVII FBtr0332096|FBtr0307304|FBtr0307302|FBtr0307305 3153532|3153532|3153532|3153532 3154934|3155678|3154934|3154934 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3L + 3154216 3154294 3'utr BtbVII FlyBase G20874.1 CGCGAACATCAAATGATTTGTAAGCAACTGCAGCTAAAAAGTGGTGCTGTGTGCCAGCAGCCGACACAAACCTTGCGGA 19 3154257 0.826023829 7 17 86 0.935483871 1.462397998 0.225806452 0.526315789 0.709677419 19 2 0 29 3L:3154216-3154294 7 10.5 1459 FBgn0263108 1294.493333 34.92 53.58666667 0.008111282 0.300687285 0.195944265 29 0 14.5 0.25 dme-miR-986-5p 6mer3-8 ATTCGA 3L 3184670 3184675 + 3L_3184670_3184675_+ 0.624681428 0.492206822 0.558444125 0.093673688 Girdin FBtr0332097|FBtr0073036|FBtr0332098|FBtr0332099|FBtr0073035 3184665|3184270|3184270|3184665|3184665 3185287|3185287|3185287|3185287|3185287 3L + 3184614 3184693 stop_codon Girdin FlyBase G27614.1 AGCGGACCGAAGACAAGAGCAATAGCATCTGGTATGAGTACGGCTGCGTCTAGATCATTCGAACAGTATACGTCCACAAC 28 3184680 0.944426751 10 28 114 1 1.505149978 0 0.142857143 0.25 28 0 0 32 3L:3184614-3184693 6 Girdin FBtr0073035|FBtr0332098|FBtr0332099|FBtr0332097|FBtr0073036 3184665|3184270|3184665|3184665|3184270 3185287|3185287|3185287|3185287|3185287 ATTCGA 6mer3-8 dme-miR-986-5p 3L + 3184639 3184693 stop_codon Girdin FlyBase G20900.1 CATCTGGTATGAGTACGGCTGCGTCTAGATCATTCGAACAGTATACGTCCACAAC 24 3184681 0.94474195 6 22 99 0.928571429 1.591064607 0.047619048 0.5 0.714285714 24 3 0 39 3L:3184639-3184693 6 24 1460 FBgn0035411 1033.61 24.37 37.36 0.02321959 0.984817398 0.642398287 -10 -11 -10.5 0.25 dme-miR-277-3p 7mer-m8 TGCATTT 3L 3184710 3184716 + 3L_3184710_3184716_+ 0.610500152 0.606423496 0.608461824 0.002882662 Girdin FBtr0332097|FBtr0073036|FBtr0332098|FBtr0332099|FBtr0073035 3184665|3184270|3184270|3184665|3184665 3185287|3185287|3185287|3185287|3185287 3L + 3184695 3184737 3'utr Girdin FlyBase G27615.1 TGAACTCGAACATAATGCATTTGCTGACGAAGTATTATTTCGT 56 3184712 0.665012073 9 54 359 0.953125 1.785329835 0.28125 0.125 0.234375 56 3 0 61 3L:3184695-3184737 7 Girdin FBtr0073035|FBtr0332098|FBtr0332099|FBtr0332097|FBtr0073036 3184665|3184270|3184665|3184665|3184270 3185287|3185287|3185287|3185287|3185287 TGCATTT 7mer-m8 dme-miR-277-3p 3L + 3184695 3184746 3'utr Girdin FlyBase G20901.1 TGAACTCGAACATAATGCATTTGCTGACGAAGTATTATTTCGTTTTAGAAAT 51 3184714 0.647639022 7 49 329 0.957746479 1.832508913 0.197183099 0.294117647 0.492957746 51 3 0 68 3L:3184695-3184746 7 52 1461 FBgn0035411 1033.61 24.37 37.36 0.050309111 2.13377103 1.391862955 -2 -4 -3 0.25 dme-miR-92b-3p 7mer-m1 TGCAATT 3L 3198044 3198050 - 3L_3198044_3198050_- 0.730540601 0.724531001 0.727535801 0.004249429 CG32276 FBtr0073107|FBtr0073106 3197861|3197861 3198320|3198320 3L - 3197946 3198111 3'utr CG32276 FlyBase G33982.1 AAGTCCATTTAAAGCATTTTGCATTAATTGATTTAACTGTAAGCTCTGCAATGTGCATTCCTGCAATTCTCTCCTAAGCAACTGAATAATGATCCCCGATCATTTATAGGCGATAAATGCATTTTTAAGATGCTTCTCGGCGCAGTTTTAAATAGTGCAAAGTGTT 51 3198054 0.983207724 16 51 389 1 1.785329835 0.049180328 0.156862745 0.295081967 51 0 0 61 3L:3197946-3198111 7 CG32276 FBtr0073106|FBtr0073107 3197861|3197861 3198320|3198320 TGCAATT 7mer-m1 dme-miR-92b-3p 3L - 3197871 3198100 3'utr CG32276 FlyBase G25695.1 AAGCATTTTGCATTAATTGATTTAACTGTAAGCTCTGCAATGTGCATTCCTGCAATTCTCTCCTAAGCAACTGAATAATGATCCCCGATCATTTATAGGCGATAAATGCATTTTTAAGATGCTTCTCGGCGCAGTTTTAAATAGTGCAAAGTGTTAAAGCGTTGTTTTCTAATGCAAAGACGAGTAGAGAAGAAACTATGAGTACATAACAATGATGAATATATGATAAT 52 3198025 0.983662081 24 48 357 0.938271605 1.880813592 0.12345679 0.384615385 0.604938272 52 5 0 76 3L:3197871-3198100 7 20.5 1462 FBgn0047135 1536 262.94 398.89 0.013346354 0.077964555 0.051392615 4 -25 -10.5 0.25 dme-miR-283-5p 6mer3-8 TGATAT 3L 3211003 3211008 + 3L_3211003_3211008_+ 0.992660783 0.693172166 0.842916475 0.21177042 gry FBtr0073042 3210992 3211348 3L + 3210983 3211031 stop_codon gry FlyBase G27647.1 AGAACAAGTAGGGATGATACTGATATAATGCCGCTTTAGTTTAAGTGTT 20 3211012 0.749163617 9 20 165 1 1.397940009 0.4 0.2 0.36 20 0 0 25 3L:3210983-3211031 6 gry FBtr0073042 3210992 3211348 TGATAT 6mer3-8 dme-miR-283-5p 3L + 3210970 3211029 stop_codon gry FlyBase G20931.1 CCTCTGAAGCAACAGAACAAGTAGGGATGATACTGATATAATGCCGCTTTAGTTTAAGTG 10 3211017 0.977659883 5 10 68 1 1.176091259 0.533333333 0.3 0.533333333 10 0 0 15 3L:3210970-3211029 6 12.5 1463 FBgn0035416 1009.253333 26.48 40.54 0.012385394 0.472054381 0.308337444 -9 -14 -11.5 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3L 3211167 3211173 + 3L_3211167_3211173_+ 0.498941207 0.521075431 0.510008319 0.015651243 gry FBtr0073042 3210992 3211348 3L + 3211110 3211287 3'utr gry FlyBase G27649.1 ACATACATAAATAACTATATATTTAGAGAGTTGCATAGCGTAATACTTGAGAGTGTGTGTGATTGTATTGTATAATGTATTGTTAAATGGGCCAAGACGCACTAGACATTATTGTTAGTTGATTACGGCGTTTTAGATAAGCAGTGCTAAGTCCTGGTCAGTACCGCAAGTTGCACAT 70 3211173 0.93764961 24 66 608 0.956521739 1.467361417 0.27173913 0.2 0.391304348 70 2 2 88 3L:3211110-3211287 7 gry FBtr0073042 3210992 3211348 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 3211128 3211277 3'utr gry FlyBase G20932.1 ATATTTAGAGAGTTGCATAGCGTAATACTTGAGAGTGTGTGTGATTGTATTGTATAATGTATTGTTAAATGGGCCAAGACGCACTAGACATTATTGTTAGTTGATTACGGCGTTTTAGATAAGCAGTGCTAAGTCCTGGTCAGTACCGCA 44 3211165 0.990940311 16 38 397 0.903225806 1.271066772 0.322580645 0.318181818 0.516129032 44 4 2 56 3L:3211128-3211277 7 38.5 1464 FBgn0035416 1009.253333 26.48 40.54 0.038147013 1.453927492 0.949679329 -6 2 -2 0.25 dme-miR-33-5p 8mer-A1 CAATGCAA 3L 3220842 3220849 + 3L_3220842_3220849_+ 0.456983015 0.489452137 0.473217576 0.022959121 CG12034 FBtr0073043 3220717 3220925 3L + 3220737 3220910 3'utr CG12034 FlyBase G27653.1 AGCTCAATGCGCATTTAAAATCCACGTGTAGCGTACTATAAGCAGCGATATATGTTTGACTAGAGTTATAGCGCTCTTACTTGATCTTTTTATTCGTGTAACCGTCAATGCAATTCCATGGTCTCTTTCTGTGTAACGTCATCCATATCCCAGGAATAATAGTTCAATAAAAGT 265 3220854 0.935713125 28 257 2399 0.973214286 2.037426498 0.044642857 0.222641509 0.386904762 265 7 2 327 3L:3220737-3220910 8 CG12034 FBtr0073043 3220717 3220925 CAATGCAA 8mer-A1 dme-miR-33-5p 3L + 3220776 3220910 3'utr CG12034 FlyBase G20935.1 AAGCAGCGATATATGTTTGACTAGAGTTATAGCGCTCTTACTTGATCTTTTTATTCGTGTAACCGTCAATGCAATTCCATGGTCTCTTTCTGTGTAACGTCATCCATATCCCAGGAATAATAGTTCAATAAAAGT 153 3220854 0.735813767 25 152 1316 0.995744681 2.369215857 0.093617021 0.405228758 0.612765957 153 1 0 234 3L:3220776-3220910 8 127 1465 FBgn0035421 132.3333333 9.493333333 14.43 0.959697733 13.37780899 8.801108801 -12 -12 -12 0.25 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3L 3232919 3232924 + 3L_3232919_3232924_+ 0.95671969 0.870997721 0.913858705 0.060614607 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3232828 3232959 3'utr CG11505 FlyBase G27690.2 CTCATTTTTGCTTACACATCAGAACGTAATGTTTATAGCCAAAACAGAAGTACACAGATAAGAGTGCGTAGCCCACATAGCTATGTCTCTGCTAGTCTCACAGGTTAGGGTTACTTCTATTATTTAGATATA 74 3232925 0.978720204 21 72 548 0.988888889 1.949390007 0.088888889 0.148648649 0.3 74 1 0 89 3L:3232828-3232959 6 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3L + 3232837 3232943 3'utr CG11505 FlyBase G20964.1 GCTTACACATCAGAACGTAATGTTTATAGCCAAAACAGAAGTACACAGATAAGAGTGCGTAGCCCACATAGCTATGTCTCTGCTAGTCTCACAGGTTAGGGTTACTT 34 3232925 0.984246319 7 33 261 0.978723404 1.662757832 0.021276596 0.294117647 0.489361702 34 1 0 46 3L:3232837-3232943 6 37.5 1466 FBgn0035424 4177.206667 52.67666667 80.83333333 0.008977291 0.711890147 0.463917526 -6 -6 -6 0.25 dme-miR-7-5p 6mer2-7 TCTTCC 3L 3233143 3233148 + 3L_3233143_3233148_+ 0.853463898 0.830162689 0.841813293 0.016476437 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3233003 3233174 3'utr CG11505 FlyBase G27691.1 ATTGTAACATTTTAACGGATGATCTTGTTTGCGCAAGAGGGTTTTTTTTTAATTAACTTGATTATGGGGATTCTCGTACTTAGTTCACGACTTAAGGGATCCTTTACACAGACACACCTGAATACGCCTAGACTAACTTATCTTCCCCCCAGACACCGACCCGTGAATACCC 199 3233145 0.869628357 16 196 1270 0.981900452 2.336459734 0.180995475 0.095477387 0.185520362 199 4 0 217 3L:3233003-3233174 6 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 TCTTCC 6mer2-7 dme-miR-7-5p 3L + 3233109 3233171 3'utr CG11505 FlyBase G20966.1 CACAGACACACCTGAATACGCCTAGACTAACTTATCTTCCCCCCAGACACCGACCCGTGAATA 57 3233145 0.962062124 4 56 279 0.987179487 1.886490725 0.256410256 0.298245614 0.487179487 57 1 0 77 3L:3233109-3233171 6 93.5 1467 FBgn0035424 4177.206667 52.67666667 80.83333333 0.022383379 1.774979434 1.156701031 -2 -2 -2 0.25 dme-miR-283-5p 8mer-A1 TGATATTA 3L 3234957 3234964 + 3L_3234957_3234964_+ 0.494210936 0.513437477 0.503824206 0.013595259 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3234818 3234998 3'utr CG11505 FlyBase G27702.1 TAACACACTGTACAGTTGAACCTCAATAGGGCGGACTGCGGACTGCGCCTTAGGTGAATCAATGGATGAGGAACAGCATGTGGCCAGAGTGGAGCCAGCTGTTCGTTGGCGACGTCTCCAAGCTTCCGACAATGAGATGTGATATTATGCAATTGACAAATCATCAATTGTGTGCGACAAA 77 3234963 0.973348285 23 68 461 0.903225806 1.924279286 0.193548387 0.171052632 0.322580645 76 9 0 84 3L:3234818-3234998 8 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 TGATATTA 8mer-A1 dme-miR-283-5p 3L + 3234907 3234974 3'utr CG11505 FlyBase G20982.1 TGGAGCCAGCTGTTCGTTGGCGACGTCTCCAAGCTTCCGACAATGAGATGTGATATTATGCAATTGAC 47 3234962 0.829281749 10 43 298 0.86746988 1.079181246 0.253012048 0.425531915 0.674698795 47 6 5 72 3L:3234907-3234974 8 43.5 1468 FBgn0035424 4177.206667 52.67666667 80.83333333 0.010413658 0.825792571 0.53814433 -6 -5 -5.5 0.25 dme-miR-34-5p 8mer-A1 CACTGCCA 3L 3235651 3235658 + 3L_3235651_3235658_+ 0.646426385 0.668851673 0.657639029 0.015857082 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3235547 3235663 3'utr CG11505 FlyBase G27706.2 CCTATGGAATGTGCCCCCCAACAGACCACTGTACATACCCTTAGCTATACATTTACATTTCCGGGGGCAATTTTCTCCTGATTTCATGCGATCACCTTCTTTGGCACTGCCATCAAA 30 3235647 0.98699469 12 24 209 0.823529412 1.447158031 0.088235294 0.133333333 0.235294118 30 6 0 28 3L:3235547-3235663 8 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 CACTGCCA 8mer-A1 dme-miR-34-5p 3L + 3235603 3235663 3'utr CG11505 FlyBase G20988.1 ATTTCCGGGGGCAATTTTCTCCTGATTTCATGCGATCACCTTCTTTGGCACTGCCATCAAA 16 3235647 0.984673081 8 15 124 0.95 1.278753601 0 0.25 0.4 16 1 0 19 3L:3235603-3235663 8 11 1469 FBgn0035424 4177.206667 52.67666667 80.83333333 0.002633339 0.20882111 0.136082474 4 4 4 0.25 dme-miR-14-3p 6mer2-7 AGACTG 3L 3313345 3313350 + 3L_3313345_3313350_+ 0.994344656 0.992637447 0.993491051 0.001207243 ZnT63C FBtr0073056|FBtr0073054|FBtr0073055|FBtr0073057|FBtr0073058|FBtr0330104 3313011|3313011|3313011|3313011|3313011|3313011 3313476|3313476|3314009|3313476|3313476|3313476 3L + 3313214 3313374 stop_codon ZnT63C FlyBase G27714.1 CGGGAGCTTCAGTTGCAGGCCGAACAGCAGTATCAGGAGCAGGTGTCACCACTGAGTACCAGGAATGGCGACGAGGTGGCACTCTAATTAGGAGCCTAGTTTAACGTTAATTGTGCAAACCGCTGCAATGGAGACTGGTCTGCCATGGTGCAGCTTTCGTG 66 3313342 0.959214535 14 63 311 0.959459459 1.550228353 0.337837838 0.106060606 0.202702703 66 2 1 71 3L:3313214-3313374 6 ZnT63C FBtr0330104|FBtr0073055|FBtr0073057|FBtr0330103|FBtr0073056|FBtr0073054|FBtr0073058 3313011|3313011|3313011|3313299|3313011|3313011|3313011 3313476|3314009|3313476|3313476|3313476|3313476|3313476 AGACTG 6mer2-7 dme-miR-14-3p 3L + 3313286 3313371 stop_codon ZnT63C FlyBase G20995.1 GAGGTGGCACTCTAATTAGGAGCCTAGTTTAACGTTAATTGTGCAAACCGCTGCAATGGAGACTGGTCTGCCATGGTGCAGCTTTC 38 3313342 0.963587387 11 38 198 1 1.763427994 0.206896552 0.342105263 0.568965517 38 0 0 58 3L:3313286-3313371 6 41.5 1470 FBgn0035432 2241.986667 107.03 164.0533333 0.018510369 0.387741755 0.252966515 3 3 3 0.25 dme-bantam-3p 7mer-m8 TGATCTC 3L 3320887 3320893 + 3L_3320887_3320893_+ 0.653747989 0.602862095 0.628305042 0.035981765 CG42456 FBtr0300240 3320650 3322489 3L + 3320867 3320925 3'utr CG42456 FlyBase G27722.1 CACCATTGGCGAGGTGCGTCTGATCTCGCAGGATGACTACTTTCTGCCCGTGGAGGACA 14 3320886 0.735583011 7 12 66 0.882352941 1.176091259 0.588235294 0.142857143 0.294117647 14 2 0 15 3L:3320867-3320925 7 CG42456 FBtr0300240 3320650 3322489 TGATCTC 7mer-m8 dme-bantam-3p 3L + 3320870 3320924 3'utr CG42456 FlyBase G21003.1 CATTGGCGAGGTGCGTCTGATCTCGCAGGATGACTACTTTCTGCCCGTGGAGGAC 6 3320887 0.976263188 3 6 33 1 0.77815125 0.166666667 0 0 6 0 0 6 3L:3320870-3320924 7 6.5 1471 FBgn0259933 101.7866667 5.366666667 8.34 0.063859052 1.211180124 0.779376499 1 0 0.5 0.25 dme-miR-1008-3p 7mer-m8 AGCTGTG 3L 3322226 3322232 + 3L_3322226_3322232_+ 0.667923661 0.668985312 0.668454487 0.000750665 CG42456 FBtr0300240 3320650 3322489 3L + 3322137 3322255 3'utr CG42456 FlyBase G27726.1 GTTATTATGGGTGACATGGTCTCTCTTGTGGAGAATGCTCTTGTAACCAGATTGTGAAATGAAGAAACTCGGTTCAGGAATTCATATTTAGCTGTGCTAACTATTATATTGTATTGTTT 147 3322224 0.820435875 21 142 1328 0.963636364 1.900367129 0.248484848 0.102040816 0.2 147 5 1 159 3L:3322137-3322255 7 CG42456 FBtr0300240 3320650 3322489 AGCTGTG 7mer-m8 dme-miR-1008-3p 3L + 3322136 3322247 3'utr CG42456 FlyBase G21005.1 AGTTATTATGGGTGACATGGTCTCTCTTGTGGAGAATGCTCTTGTAACCAGATTGTGAAATGAAGAAACTCGGTTCAGGAATTCATATTTAGCTGTGCTAACTATTATATTG 101 3322224 0.799609662 20 96 880 0.953642384 2.158362492 0.231788079 0.356435644 0.569536424 101 7 0 144 3L:3322136-3322247 7 69.5 1472 FBgn0259933 101.7866667 5.366666667 8.34 0.682800629 12.95031056 8.333333333 2 2 2 0.25 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 3370478 3370485 - 3L_3370478_3370485_- 0.565585198 0.626341483 0.59596334 0.042961192 YT521-B FBtr0073078 3370449 3371600 3L - 3370450 3370507 3'utr YT521-B FlyBase G34049.1 TGCACGAAGAAACTTAGAGAGAAAGACTGATGCCTAATAAAGACTCAAGCTGATTGCA 87 3370477 0.757700146 7 84 339 0.963302752 1.720159303 0.128440367 0.206896552 0.366972477 87 3 1 105 3L:3370450-3370507 8 YT521-B FBtr0073078 3370449 3371600 AAGACTGA 8mer-A1 dme-miR-14-3p 3L - 3370455 3370508 3'utr YT521-B FlyBase G25745.1 TTGCACGAAGAAACTTAGAGAGAAAGACTGATGCCTAATAAAGACTCAAGCTGA 75 3370494 0.904162336 5 65 274 0.87037037 1.672097858 0.231481481 0.32 0.527777778 75 13 1 94 3L:3370455-3370508 8 76 1473 FBgn0027616 901.75 38.03333333 58.06666667 0.084280566 1.998247152 1.308840413 -8 9 0.5 0.25 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 3468272 3468277 - 3L_3468272_3468277_- 0.945412792 0.986319002 0.965865897 0.028925051 CG14971 FBtr0073143 3468021 3468780 3L - 3468234 3468302 3'utr CG14971 FlyBase G34136.1 AGAAAGCCTTAATGACCCTTTCATTGTTCCTTAACTGACATCTTTAATTTGGCATTCCAAATTGAATTG 25 3468278 0.985077068 10 23 249 0.925925926 1.397940009 0 0.08 0.148148148 25 2 0 25 3L:3468234-3468302 6 CG14971 FBtr0073143 3468021 3468780 GTTCCT 6mer2-7 dme-miR-276a-3p 3L - 3468240 3468318 3'utr CG14971 FlyBase G25817.1 AACCTATGTAAAAATAAGAAAGCCTTAATGACCCTTTCATTGTTCCTTAACTGACATCTTTAATTTGGCATTCCAAATT 23 3468279 0.988176474 10 22 206 0.939393939 1.014240439 0.03030303 0.347826087 0.545454545 23 0 2 31 3L:3468240-3468318 6 18.5 1474 FBgn0035449 481.2366667 24.29333333 37.37 0.038442624 0.761525796 0.495049505 1 2 1.5 0.25 dme-miR-184-3p 6mer3-8 TCCGTC 3L 3468626 3468631 - 3L_3468626_3468631_- 0.923820392 0.984049964 0.953935178 0.042588759 CG14971 FBtr0073143 3468021 3468780 3L - 3468599 3468660 3'utr CG14971 FlyBase G34137.1 AGCTAGTTAGTTTGACACTCTTCATTCCTTCCGTCACCGATTCCCTCAACTTCCTCGATGCA 213 3468636 0.734454623 6 211 1698 0.992125984 2.401400541 0.106299213 0.154929577 0.291338583 213 2 0 252 3L:3468599-3468660 6 CG14971 FBtr0073143 3468021 3468780 TCCGTC 6mer3-8 dme-miR-184-3p 3L - 3468554 3468661 3'utr CG14971 FlyBase G25818.1 AAGCTAGTTAGTTTGACACTCTTCATTCCTTCCGTCACCGATTCCCTCAACTTCCTCGATGCATTCCCGCCTTGTGCATTTAGGGGCTAGGCTAGATATATGAGACGT 125 3468636 0.984114619 12 120 977 0.947368421 1.653212514 0.084210526 0.384 0.594736842 125 7 3 180 3L:3468554-3468661 6 164 1475 FBgn0035449 481.2366667 24.29333333 37.37 0.340788663 6.750823271 4.388546963 5 5 5 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA 3L 3505238 3505245 + 3L_3505238_3505245_+ 0.564093242 0.58078132 0.572437281 0.011800269 CG42324 FBtr0334633|FBtr0330142 3505096|3505096 3505316|3505316 3L + 3505190 3505251 3'utr CG42324 FlyBase G27820.1 AATCACGAAGACTGCGTTAAGTTAACAATATGATTTCGTTCCCTTGACTGCATTTAACAATC 21 3505233 0.782574145 11 21 168 1 1.397940009 0.08 0.142857143 0.28 21 0 0 25 3L:3505190-3505251 8 CG42324 FBtr0330142|FBtr0334633 3505096|3505096 3505316|3505316 TGCATTTA 8mer-A1 dme-miR-277-3p 3L + 3505171 3505246 3'utr CG42324 FlyBase G21076.1 TTTTCTAGGCAACGGATTCAATCACGAAGACTGCGTTAAGTTAACAATATGATTTCGTTCCCTTGACTGCATTTAA 19 3505232 0.990981629 10 16 159 0.869565217 1.301029996 0.086956522 0.210526316 0.347826087 19 3 0 20 3L:3505171-3505246 8 12.5 1476 FBgn0259224 58.33333333 1.43 2.216666667 0.214285714 8.741258741 5.639097744 5 6 5.5 0.25 dme-miR-7-5p 7mer-m8 GTCTTCC 3L 3508949 3508955 + 3L_3508949_3508955_+ 0.638758788 0.628935567 0.633847177 0.006946051 CG42324 FBtr0334634|FBtr0334632|FBtr0334635|FBtr0334636 3508532|3508532|3508532|3508532 3510895|3510895|3510895|3510895 3L + 3508924 3508960 3'utr CG42324 FlyBase G27838.1 TGTTCATTATATGTTACCCCTTAAAGTCTTCCTTTTC 13 3508956 0.922617944 5 10 122 0.769230769 0.698970004 0 0 0 13 2 1 10 3L:3508924-3508960 7 CG42324 FBtr0334636|FBtr0334635|FBtr0334632|FBtr0334634 3508532|3508532|3508532|3508532 3510895|3510895|3510895|3510895 GTCTTCC 7mer-m8 dme-miR-7-5p 3L + 3508913 3508961 3'utr CG42324 FlyBase G21094.1 TTTAGTATGTATGTTCATTATATGTTACCCCTTAAAGTCTTCCTTTTCA 10 3508957 0.992842402 7 9 106 0.909090909 0.698970004 0 0.1 0.181818182 10 0 1 10 3L:3508913-3508961 7 10.5 1477 FBgn0259224 58.33333333 1.43 2.216666667 0.18 7.342657343 4.736842105 -7 -8 -7.5 0.25 dme-miR-92b-3p 8mer-A1 GTGCAATA 3L 3509329 3509336 + 3L_3509329_3509336_+ 0.528460055 0.624414571 0.576437313 0.067850078 CG42324 FBtr0334634|FBtr0334632|FBtr0334635|FBtr0334636 3508532|3508532|3508532|3508532 3510895|3510895|3510895|3510895 3L + 3509187 3509350 3'utr CG42324 FlyBase G27840.1 AACCACGAGAATTCGAAAACTTTGCCCAAGCAAACTTAGGTTACACTGGAAATATATGAATTATATTTATAGGAATATATAGATAATTATGCTATATACGATTTATATTTGATAAGCGCGTTATATTTTCTACATTCCGATTGTGCAATATTTTTTGGTAGTGT 27 3509327 0.973582754 13 26 233 0.96875 1.491361694 0.125 0.074074074 0.21875 27 1 0 31 3L:3509187-3509350 8 CG42324 FBtr0334636|FBtr0334635|FBtr0334632|FBtr0334634 3508532|3508532|3508532|3508532 3510895|3510895|3510895|3510895 GTGCAATA 8mer-A1 dme-miR-92b-3p 3L + 3509315 3509348 3'utr CG42324 FlyBase G21098.1 TCTACATTCCGATTGTGCAATATTTTTTGGTAGT 9 3509327 0.842265092 2 7 92 0.705882353 1.079181246 0.117647059 0.555555556 0.764705882 9 5 0 12 3L:3509315-3509348 8 8.5 1478 FBgn0259224 58.33333333 1.43 2.216666667 0.145714286 5.944055944 3.834586466 2 2 2 0.25 dme-miR-8-3p 6mer2-7 AGTATT 3L 355982 355987 + 3L_355982_355987_+ 0.607083424 0.698166052 0.652624738 0.064405195 Ptpmeg FBtr0306560|FBtr0306562|FBtr0306563 355526|355526|355526 356050|356050|356050 3L + 355940 356000 3'utr Ptpmeg FlyBase G26774.1 GCGAACCTTATACACTGATAGACATGAGAAGATAAAACTGTTAGTATTTTAGCACCAAATC 64 355981 0.664473635 11 49 408 0.766233766 1.293730757 0.155844156 0.15625 0.298701299 64 16 2 59 3L:355940-356000 6 Ptpmeg FBtr0306562|FBtr0306563|FBtr0306560 355526|355526|355526 356050|356050|356050 AGTATT 6mer2-7 dme-miR-8-3p 3L + 355924 355998 3'utr Ptpmeg FlyBase G20239.1 AAGAGCAACCGAGAATGCGAACCTTATACACTGATAGACATGAGAAGATAAAACTGTTAGTATTTTAGCACCAAA 40 355981 0.988009629 12 29 256 0.7 1.146128036 0.1 0.325 0.55 40 16 2 42 3L:355924-355998 6 45.5 1479 FBgn0261985 1055.98 31.95666667 49.17666667 0.043087937 1.423803067 0.925235545 1 1 1 0.25 dme-miR-33-5p 7mer-A1 AATGCAA 3L 3607701 3607707 + 3L_3607701_3607707_+ 0.779999598 0.770199727 0.775099663 0.006929576 Eip63E FBtr0302598|FBtr0073134|FBtr0110925|FBtr0110923|FBtr0110921|FBtr0110924|FBtr0330068|FBtr0073133|FBtr0073131|FBtr0110920|FBtr0073132|FBtr0073135|FBtr0110922|FBtr0301948 3607565|3607565|3607565|3607565|3607565|3607565|3607613|3607565|3607565|3607565|3607565|3607565|3607565|3607565 3610521|3608549|3608549|3608549|3608549|3610521|3608549|3608549|3608549|3608549|3608549|3608549|3608549|3608549 3L + 3607684 3607723 3'utr Eip63E FlyBase G27860.1 AATCGACAGCCATATATAATGCAAGAGGAACTTCTCGCCC 30 3607699 0.6075269 4 22 123 0.787878788 0.937852093 0.212121212 0.1 0.181818182 30 5 2 26 3L:3607684-3607723 7 Eip63E FBtr0110922|FBtr0073133|FBtr0301948|FBtr0110921|FBtr0073132|FBtr0110925|FBtr0073135|FBtr0302598|FBtr0110924|FBtr0330068|FBtr0073131|FBtr0110920|FBtr0073134|FBtr0110923 3607565|3607565|3607565|3607565|3607565|3607565|3607565|3607565|3607565|3607613|3607565|3607565|3607565|3607565 3608549|3608549|3608549|3608549|3608549|3608549|3608549|3610521|3610521|3608549|3608549|3608549|3608549|3608549 AATGCAA 7mer-A1 dme-miR-33-5p 3L + 3607667 3607836 3'utr Eip63E FlyBase G21110.1 CTATCGCATCATCCAGCAATCGACAGCCATATATAATGCAAGAGGAACTTCTCGCCCGCGCAGAAGTTTTGTACTATAATTCTATGATACTTTTTAGTTATTAGTTCGATTTCGCAGTGAGTTAGCTGAGGGAGTTTAGCAGAAGACACGGCACCAACGGCAGCATTTTA 30 3607699 0.956481142 16 29 145 0.930232558 1.602059991 0.302325581 0.4 0.581395349 30 3 0 40 3L:3607667-3607836 7 20.5 1480 FBgn0005640 1126.993333 37.81333333 57.97333333 0.018189992 0.542136812 0.353610856 2 2 2 0.25 dme-miR-79-3p 7mer-m8 TAGCTTT 3L 3615165 3615171 + 3L_3615165_3615171_+ 0.618328956 0.615173679 0.616751318 0.002231134 CG10359 FBtr0290290|FBtr0273204 3615072|3615072 3615244|3615244 3L + 3615135 3615195 3'utr CG10359 FlyBase G27866.1 AATCGATTGCTTGCATTTTAACCCTAGCTTTAGCTTTGAATCTCTCTGTGCGTGTGTGTGT 24 3615170 0.824682188 10 20 234 0.833333333 1.397940009 0.5 0.208333333 0.366666667 24 5 0 25 3L:3615135-3615195 7 CG10359 FBtr0273204|FBtr0290290 3615072|3615072 3615244|3615244 TAGCTTT 7mer-m8 dme-miR-79-3p 3L + 3615127 3615196 3'utr CG10359 FlyBase G21116.1 TAACCCACAATCGATTGCTTGCATTTTAACCCTAGCTTTAGCTTTGAATCTCTCTGTGCGTGTGTGTGTA 19 3615170 0.994499024 7 14 201 0.724137931 1.322219295 0.206896552 0.421052632 0.620689655 19 8 0 21 3L:3615127-3615196 7 14 1481 FBgn0035452 20.66666667 1.506666667 2.33 0.677419355 9.292035398 6.008583691 -5 -5 -5 0.25 dme-miR-304-5p 8mer-A1 TGAGATTA 3L 3813693 3813700 + 3L_3813693_3813700_+ 0.623808672 0.624373751 0.624091212 0.000399586 CG12006 FBtr0073150|FBtr0073149 3813623|3813623 3813958|3813958 3L + 3813605 3813717 stop_codon CG12006 FlyBase G27872.1 ACGAGAATCTGTTCAATTAGATAATAGAGAAAATAAGAGAACCCACCACCGACGCCCTCCGTTCAAAAGCAAGAAGCAATGACACATTTGAGATTAACTAATAGATACAAACC 53 3813692 0.999859162 8 51 308 0.970149254 1.812913357 0.059701493 0.226415094 0.388059701 53 2 0 65 3L:3813605-3813717 8 CG12006 FBtr0073149|FBtr0073150 3813623|3813623 3813958|3813958 TGAGATTA 8mer-A1 dme-miR-304-5p 3L + 3813564 3813704 stop_codon CG12006 FlyBase G21121.1 CGATCATCCGCCGCTGGAGGATCTCGTCCTGGCCAACGAGAACGAGAATCTGTTCAATTAGATAATAGAGAAAATAAGAGAACCCACCACCGACGCCCTCCGTTCAAAAGCAAGAAGCAATGACACATTTGAGATTAACTA 25 3813692 0.974048468 8 22 122 0.875 1.06694679 0.1 0.48 0.675 25 3 2 35 3L:3813564-3813704 8 27 1482 FBgn0035464 622.06 34.45666667 52.80333333 0.043404173 0.783592919 0.511331355 1 1 1 0.25 dme-bantam-3p 6mer2-7 GATCTC 3L 3813928 3813933 + 3L_3813928_3813933_+ 0.966755778 0.937931601 0.952343689 0.020381787 CG12006 FBtr0073150|FBtr0073149 3813623|3813623 3813958|3813958 3L + 3813906 3813951 3'utr CG12006 FlyBase G27874.1 ACTTGATCTGTCCTTTCTTTAAGATCTCGAAATAAAGGTTCAGTGG 15 3813924 0.981148013 4 14 134 0.894736842 0.753327667 0.052631579 0.133333333 0.315789474 15 0 2 17 3L:3813906-3813951 6 CG12006 FBtr0073149|FBtr0073150 3813623|3813623 3813958|3813958 GATCTC 6mer2-7 dme-bantam-3p 3L + 3813913 3813938 3'utr CG12006 FlyBase G21124.1 CTGTCCTTTCTTTAAGATCTCGAAAT 12 3813924 0.699683245 4 12 96 1 1.255272505 0 0.333333333 0.555555556 12 0 0 18 3L:3813913-3813938 6 13.5 1483 FBgn0035464 622.06 34.45666667 52.80333333 0.021702087 0.391796459 0.255665678 4 4 4 0.25 dme-miR-283-5p 6mer3-8 TGATAT 3L 3936739 3936744 - 3L_3936739_3936744_- 0.604811086 0.796087273 0.70044918 0.135252698 CG10866 FBtr0073173|FBtr0345342 3936595|3936058 3937012|3937012 3L - 3936720 3936776 3'utr CG10866 FlyBase G34186.2 TCTAACTAGAATACAGATAATATCCGGATATGTGATATGTAGTCCTTAGACAAACTA 89 3936748 0.988611041 10 80 766 0.91588785 1.991226076 0.065420561 0.157303371 0.299065421 89 9 0 98 3L:3936720-3936776 6 CG10866 FBtr0345342|FBtr0073173 3936058|3936595 3937012|3937012 TGATAT 6mer3-8 dme-miR-283-5p 3L - 3936655 3936770 3'utr CG10866 FlyBase G25860.1 TAGAATACAGATAATATCCGGATATGTGATATGTAGTCCTTAGACAAACTAGAGTAACGAGCATAGCGCACAACGATATCTAATCGATTTTCAACTTCAACTCTGACTCTTGTAAC 74 3936739 0.985422993 15 68 564 0.896551724 1.716003344 0.103448276 0.391891892 0.612068966 74 11 1 104 3L:3936655-3936770 6 75 1484 FBgn0035475 72.03666667 6.396666667 9.86 1.041136458 11.7248567 7.606490872 4 -5 -0.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 3936987 3936993 - 3L_3936987_3936993_- 0.516359716 0.51631714 0.516338428 3.01E-05 CG10866 FBtr0073173|FBtr0073173|FBtr0073173|FBtr0345342|FBtr0345342|FBtr0345342 3936595|3936595|3936595|3936058|3936058|3936058 3937012|3937012|3937012|3937012|3937012|3937012 3L - 3936808 3937030 stop_codon CG10866 FlyBase G34187.1 CGCTACATGCAGGTCTAGGCTATATGTAGGAACACTTTGTGATAATATTGCAAAACATCATCAAATGGTAAATGCAAATTGCTTTTCAAGCTTCAAGCGCTTTAAGATTAGAGATCGCCTAGAAACCCAAATACTTCCTCGCAACAGGACACAATTTTACACGGATCTACTACTAGAAGTACCTTTTTGAGGGAACTATGCTTCCCGTCCAATTGATTTTTCT 422 3936994 0.809104586 37 401 3114 0.950664137 1.62065648 0.168880455 0.201421801 0.360531309 422 15 11 501 3L:3936808-3937030 7 CG10866 FBtr0345342|FBtr0345342|FBtr0345342|FBtr0073173|FBtr0073173|FBtr0073173 3936058|3936058|3936058|3936595|3936595|3936595 3937012|3937012|3937012|3937012|3937012|3937012 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 3936878 3937031 stop_codon CG10866 FlyBase G25861.2 TCGCTACATGCAGGTCTAGGCTATATGTAGGAACACTTTGTGATAATATTGCAAAACATCATCAAATGGTAAATGCAAATTGCTTTTCAAGCTTCAAGCGCTTTAAGATTAGAGATCGCCTAGAAACCCAAATACTTCCTCGCAACAGGACACA 216 3936994 0.802454071 20 198 1548 0.922330097 1.278753601 0.174757282 0.347222222 0.54368932 216 10 14 285 3L:3936878-3937031 7 194.5 1485 FBgn0035475 72.03666667 6.396666667 9.86 2.700013882 30.4064617 19.72616633 1 1 1 0.25 dme-bantam-3p 7mer-A1 GATCTCA 3L 4038288 4038294 - 3L_4038288_4038294_- 0.793707297 0.802825251 0.798266274 0.0064474 CG11593 FBtr0114509|FBtr0332982 4037521|4037521 4038458|4038458 3L - 4038211 4038392 3'utr CG11593 FlyBase G34196.1 ACTCGCTACTCGAGCCTCTGCATTCCCCATCTTCAATAAGGACTGAGGCTAATCCTCCAAACCGATCGTTTGCGCTCTCTCGCTATGCTTTAATTTAAGATCTCAATCTTTGTGATACTTTATTTTTGCCTTCTCTCAGCCAAGTCGAAATCCCCCCCAGCATTTTTCTGTGTGAAGCGTGA 190 4038301 0.987340644 28 178 1597 0.937219731 1.278753601 0.295964126 0.152631579 0.278026906 190 4 10 209 3L:4038211-4038392 7 CG11593 FBtr0332982|FBtr0114509 4037521|4037521 4038458|4038458 GATCTCA 7mer-A1 dme-bantam-3p 3L - 4038231 4038417 3'utr CG11593 FlyBase G25868.1 TGCAAACTTAACGCATTCATGCCACACTCGCTACTCGAGCCTCTGCATTCCCCATCTTCAATAAGGACTGAGGCTAATCCTCCAAACCGATCGTTTGCGCTCTCTCGCTATGCTTTAATTTAAGATCTCAATCTTTGTGATACTTTATTTTTGCCTTCTCTCAGCCAAGTCGAAATCCCCCCCAGCA 108 4038299 0.984197876 30 103 906 0.961783439 2.178976947 0.324840764 0.342592593 0.547770701 108 6 0 151 3L:4038231-4038417 7 80.5 1486 FBgn0035488 490 23.04 35.21 0.164285714 3.493923611 2.286282306 7 5 6 0.25 dme-miR-33-5p 7mer-A1 AATGCAA 3L 4094424 4094430 - 3L_4094424_4094430_- 0.761583482 0.741893616 0.751738549 0.013922862 CG14995 FBtr0073272|FBtr0073271|FBtr0310630|FBtr0073273|FBtr0302304|FBtr0300877 4094341|4094341|4094341|4094341|4094341|4094341 4095008|4095008|4095008|4095008|4095008|4097425 3L - 4094398 4094473 3'utr CG14995 FlyBase G34204.1 AAAGCAAATAACGCTAAACCTTAATTTTAATATATTTACCTAAAATGCAATGAACACGTCCAGTTTATGTTTGCCG 8 4094423 0.977098458 5 7 56 0.888888889 0.602059991 0 0.125 0.222222222 8 0 1 8 3L:4094398-4094473 7 CG14995 FBtr0073272|FBtr0310630|FBtr0302304|FBtr0073271|FBtr0073273|FBtr0300877 4094341|4094341|4094341|4094341|4094341|4094341 4095008|4095008|4095008|4095008|4095008|4097425 AATGCAA 7mer-A1 dme-miR-33-5p 3L - 4094406 4094445 3'utr CG14995 FlyBase G25875.1 AATATATTTACCTAAAATGCAATGAACACGTCCAGTTTAT 9 4094424 0.95768435 4 8 43 0.923076923 1.079181246 0.384615385 0.222222222 0.461538462 9 1 0 12 3L:4094406-4094445 7 7.5 1487 FBgn0035497 401.3666667 15.55333333 23.84 0.018686156 0.482211745 0.314597315 -7 -6 -6.5 0.25 dme-miR-305-5p 7mer-m1 GTACAAT 3L 4113940 4113946 + 3L_4113940_4113946_+ 0.71541358 0.603957354 0.659685467 0.078811435 Ack FBtr0073211 4113786 4114157 3L + 4113723 4113966 stop_codon Ack FlyBase G27961.1 AGGCGCTGCAGCAGACCAACTGGAGCTTAGAGGTGGCAGCTGAACTACTACTGAATGCCGGCTAAACCCACAAACTACAACCATGTATTACCGCCTCGAATGTAATTGCTTTAGTTTTACGTGCTGAATATTCTTTTAAACTTAGCTAACGATGTATCGAATCTTTATCAAAATACTCCTAGGTGAATGCGCGAATGCAAACACATTGTCAACGACTGTACAATTTGTTCTATTTAATGTAAGC 153 4113946 0.942671385 32 146 880 0.956989247 1.773298748 0.290322581 0.189542484 0.333333333 153 6 2 178 3L:4113723-4113966 7 Ack FBtr0073211 4113786 4114157 GTACAAT 7mer-m1 dme-miR-305-5p 3L + 4113810 4113958 3'utr Ack FlyBase G21181.1 TTACCGCCTCGAATGTAATTGCTTTAGTTTTACGTGCTGAATATTCTTTTAAACTTAGCTAACGATGTATCGAATCTTTATCAAAATACTCCTAGGTGAATGCGCGAATGCAAACACATTGTCAACGACTGTACAATTTGTTCTATTTA 95 4113946 0.842325462 21 89 603 0.957746479 1.832508913 0.352112676 0.4 0.598591549 95 5 1 136 3L:4113810-4113958 7 67 1488 FBgn0028484 434.37 11.81666667 17.96333333 0.15424638 5.669957687 3.729820004 -6 -6 -6 0.25 dme-bantam-3p 6mer3-8 TGATCT 3L 4114338 4114343 - 3L_4114338_4114343_- 0.869069421 0.948623468 0.908846444 0.056253244 Chd64 FBtr0073270|FBtr0310531 4114287|4114287 4114971|4114971 3L - 4114273 4114364 3'utr Chd64 FlyBase G34209.1 TACGTGTTACACACTTTTGAATGATCTATTTTAAATAATGTCCCCTGTTGAAAATAAATAATTATTCTTTTAACACATATTGCTTGTATCTT 44 4114343 0.992255081 11 42 476 0.961538462 1.698970004 0.057692308 0.136363636 0.269230769 44 2 0 50 3L:4114273-4114364 6 Chd64 FBtr0310531|FBtr0073270 4114287|4114287 4114971|4114971 TGATCT 6mer3-8 dme-bantam-3p 3L - 4114292 4114357 3'utr Chd64 FlyBase G25878.1 TACACACTTTTGAATGATCTATTTTAAATAATGTCCCCTGTTGAAAATAAATAATTATTCTTTTAA 25 4114344 0.992395246 8 24 264 0.973684211 1.568201724 0.157894737 0.4 0.605263158 25 1 0 37 3L:4114292-4114357 6 30 1489 FBgn0035499 3483.076667 314.5766667 480.2833333 0.008613075 0.095366259 0.062463129 0 1 0.5 0.25 dme-miR-980-5p 6mer2-7 AAAAAC 3L 4114416 4114421 - 3L_4114416_4114421_- 0.992196141 0.872575436 0.932385788 0.084584608 Chd64 FBtr0073270|FBtr0310531 4114287|4114287 4114971|4114971 3L - 4114409 4114499 3'utr Chd64 FlyBase G34210.1 GTGTTTGATGAATGTGTCTTCTATCTCGTAGAGTAACGATTACAATGTTGTTTCGAACTAACCACCTGAATACCAATCAAAAACGCAGAGC 13 4114441 0.978866028 9 12 79 0.923076923 1.079181246 0.153846154 0 0 13 1 0 12 3L:4114409-4114499 6 Chd64 FBtr0310531|FBtr0073270 4114287|4114287 4114971|4114971 AAAAAC 6mer2-7 dme-miR-980-5p 3L - 4114380 4114486 3'utr Chd64 FlyBase G25879.1 GTGTCTTCTATCTCGTAGAGTAACGATTACAATGTTGTTTCGAACTAACCACCTGAATACCAATCAAAAACGCAGAGCATTTACAATAATGTATTTACAGGCAGAGC 12 4114441 0.970371437 9 12 70 1 1.204119983 0.125 0.25 0.4375 12 0 0 16 3L:4114380-4114486 6 2.5 1490 FBgn0035499 3483.076667 314.5766667 480.2833333 0.000717756 0.007947188 0.005205261 20 20 20 0.25 dme-miR-33-5p 8mer-A1 CAATGCAA 3L 4140749 4140756 + 3L_4140749_4140756_+ 0.625575386 0.630977584 0.628276485 0.003819932 Ras64B FBtr0073212 4140459 4141398 3L + 4140714 4140823 3'utr Ras64B FlyBase G27969.1 AAATAGCTACGAAGAATCTTACAACTGACAACTAACAATGCAAAATGCAAACAGAAACACGAAACATAGGTAGATATATACAACAGATTCACACGAATAACTTATATATA 48 4140746 0.940494905 9 44 177 0.9 1.73239376 0.35 0.208333333 0.366666667 48 6 0 54 3L:4140714-4140823 8 Ras64B FBtr0073212 4140459 4141398 CAATGCAA 8mer-A1 dme-miR-33-5p 3L + 4140694 4140766 3'utr Ras64B FlyBase G21184.1 GAATAAACTTCGCCACTCTCAAATAGCTACGAAGAATCTTACAACTGACAACTAACAATGCAAAATGCAAACA 30 4140746 0.850917177 9 28 111 0.955555556 1.633468456 0.488888889 0.333333333 0.555555556 30 2 0 43 3L:4140694-4140766 8 28.5 1491 FBgn0003206 861.7733333 65.11666667 99.82666667 0.033071341 0.437675966 0.285494858 3 3 3 0.25 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 4173445 4173451 + 3L_4173445_4173451_+ 0.811774621 0.822315105 0.817044863 0.007453259 Ero1L FBtr0073217 4173388 4173789 3L + 4173356 4173623 stop_codon Ero1L FlyBase G27974.1 CGAGATGGAGAATTTCCGGTGCGTGCTGAGGTAACCCATCCAGACTGGACTAACCGAGCGACGAGCCGGATCTCATTCGCCTCACATGAGCAGCTAGTTAATTCATACGCACATCGCTGGGGCTGCGTCTTGGACTTCCTACTGAATGCGGTTTCCCTCCCATAGTTCGTAACATTTTTGAGGCCAGAGGCTAGTAACCCCAGGATAGCTGCTTCCCTGTACATACAAACTATTACCCTAGGCTACTTGTACTTTAGCGCACCGTATC 507 4173442 0.949795386 31 498 3210 0.985148515 2.298853076 0.072607261 0.151873767 0.290429043 507 7 2 597 3L:4173356-4173623 7 Ero1L FBtr0073217 4173388 4173789 GCAGCTA 7mer-A1 dme-miR-980-3p 3L + 4173339 4173629 stop_codon Ero1L FlyBase G21189.1 CTATCCAACAGTATATACGAGATGGAGAATTTCCGGTGCGTGCTGAGGTAACCCATCCAGACTGGACTAACCGAGCGACGAGCCGGATCTCATTCGCCTCACATGAGCAGCTAGTTAATTCATACGCACATCGCTGGGGCTGCGTCTTGGACTTCCTACTGAATGCGGTTTCCCTCCCATAGTTCGTAACATTTTTGAGGCCAGAGGCTAGTAACCCCAGGATAGCTGCTTCCCTGTACATACAAACTATTACCCTAGGCTACTTGTACTTTAGCGCACCGTATCACCCTA 405 4173442 0.973535837 34 392 2374 0.975409836 2.172456974 0.091803279 0.377777778 0.586885246 405 12 3 595 3L:4173339-4173629 7 163 1492 FBgn0261274 553.5433333 32.04333333 49.15666667 0.294466558 5.086861542 3.315928663 3 3 3 0.25 dme-miR-8-3p 7mer-A1 AGTATTA 3L 4223420 4223426 + 3L_4223420_4223426_+ 0.749027569 0.742365931 0.74569675 0.004710533 CG43367 FBtr0307311|FBtr0307309|FBtr0307312|FBtr0307310 4222591|4222591|4222591|4222591 4224003|4224003|4224003|4224003 3L + 4223397 4223473 3'utr CG43367 FlyBase G27991.1 ATTAACAGAGCATTTCCAATTGAAGTATTATCACCACAGCACGATCACAGTCCGTCCACACAGATCCGAGATCCGCA 45 4223416 0.921664097 5 42 291 0.93877551 1.361727836 0.163265306 0.088888889 0.163265306 45 2 1 46 3L:4223397-4223473 7 CG43367 FBtr0307310|FBtr0307312|FBtr0307309|FBtr0307311 4222591|4222591|4222591|4222591 4224003|4224003|4224003|4224003 AGTATTA 7mer-A1 dme-miR-8-3p 3L + 4223399 4223467 3'utr CG43367 FlyBase G21201.1 TAACAGAGCATTTCCAATTGAAGTATTATCACCACAGCACGATCACAGTCCGTCCACACAGATCCGAGA 16 4223416 0.831134552 4 12 91 0.782608696 1.255272505 0.217391304 0.25 0.47826087 16 5 0 18 3L:4223399-4223467 7 22.5 1493 FBgn0263110 1107.403333 13.19666667 20.14666667 0.020317801 1.704976004 1.11681006 4 4 4 0.25 dme-miR-14-3p 7mer-A1 AGACTGA 3L 4246452 4246458 - 3L_4246452_4246458_- 0.823349551 0.823349525 0.823349538 7.07E-08 ago FBtr0073247|FBtr0073246|FBtr0073245 4246341|4246341|4246341 4247475|4247475|4247475 3L - 4246433 4246478 3'utr ago FlyBase G34293.1 CGAACATATATTTTAATTATAGACTGATTTATTAGTAATTGAAATT 138 4246461 0.629084531 14 130 1594 0.946428571 1.72427587 0.029761905 0.18115942 0.327380952 138 7 2 159 3L:4246433-4246478 7 ago FBtr0073246|FBtr0073245|FBtr0073247 4246341|4246341|4246341 4247475|4247475|4247475 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 4246425 4246490 3'utr ago FlyBase G25945.1 GAAATCATTAAGCGAACATATATTTTAATTATAGACTGATTTATTAGTAATTGAAATTAATCTACA 117 4246462 0.992941524 15 109 1278 0.942307692 1.866287339 0.038461538 0.256410256 0.442307692 117 8 1 147 3L:4246425-4246490 7 125 1494 FBgn0041171 1117.28 25.37333333 39.01 0.111878849 4.92643195 3.204306588 3 4 3.5 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3L 4405020 4405026 + 3L_4405020_4405026_+ 0.521206196 0.521195439 0.521200818 7.64E-06 Syx17 FBtr0073293 4404847 4405168 3L + 4405001 4405037 3'utr Syx17 FlyBase G28070.2 TAGTTCAATATCCCCATTTTGTGATTTTCCACGTGCA 120 4405019 0.602524336 9 113 1180 0.946745562 1.602059991 0.01183432 0.275 0.485207101 120 6 3 160 3L:4405001-4405037 7 Syx17 FBtr0073293 4404847 4405168 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 4404932 4405036 stop_codon Syx17 FlyBase G21253.1 AGCCACCAACGGAGTGATTTGCAGCGTGCGCAGCTATTGTTCCGTTCAGTAGAAATTTGACCACGATTTTAGTTCAATATCCCCATTTTGTGATTTTCCACGTGC 103 4405019 0.989410739 11 101 981 0.981012658 2.190331698 0.056962025 0.398058252 0.607594937 103 3 0 155 3L:4404932-4405036 7 100 1495 FBgn0035540 155.05 12.22333333 18.79666667 0.644953241 8.181074448 5.320092215 1 1 1 0.25 dme-miR-304-5p 6mer2-7 GAGATT 3L 4405293 4405298 - 3L_4405293_4405298_- 0.78722542 0.861505883 0.824365652 0.052524245 CG15019 FBtr0073335|FBtr0113139 4405212|4405125 4405360|4405360 3L - 4405263 4405309 3'utr CG15019 FlyBase G34354.1 GCTTAGTTTAGGAGATTTTGTAGGCTTTTTCTACAAAGATGTTATAG 11 4405281 0.989105411 6 11 103 1 1.113943352 0.384615385 0.181818182 0.307692308 11 0 0 13 3L:4405263-4405309 6 CG15019 FBtr0113139|FBtr0073335 4405125|4405212 4405360|4405360 GAGATT 6mer2-7 dme-miR-304-5p 3L - 4405272 4405321 3'utr CG15019 FlyBase G25984.1 TTATAAGTCCTCGCTTAGTTTAGGAGATTTTGTAGGCTTTTTCTACAAAG 14 4405282 0.662701651 7 12 133 0.863636364 0.67669361 0.090909091 0.428571429 0.636363636 14 0 3 19 3L:4405272-4405321 6 8.5 1496 FBgn0035541 1035.333333 200.3066667 308.5366667 0.008209916 0.042434933 0.0275494 -17 -16 -16.5 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3L 4539056 4539062 + 3L_4539056_4539062_+ 0.520418252 0.51261878 0.516518516 0.005515079 CG11353 FBtr0073309|FBtr0073308 4538997|4538997 4539270|4539270 3L + 4539025 4539085 3'utr CG11353 FlyBase G28099.1 AAGGTCACCGCACACGCCTCCATCTGACAATTGTGATTGCTTTCATGTACAACTAATCATT 63 4539055 0.825982567 7 58 502 0.934210526 1.073107098 0.026315789 0.174603175 0.315789474 63 0 5 71 3L:4539025-4539085 7 CG11353 FBtr0073308|FBtr0073309 4538997|4538997 4539270|4539270 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 4539026 4539093 3'utr CG11353 FlyBase G21280.1 AGGTCACCGCACACGCCTCCATCTGACAATTGTGATTGCTTTCATGTACAACTAATCATTATTATCGA 57 4539062 0.98701345 8 54 474 0.975308642 1.897627091 0 0.263157895 0.481481481 57 2 0 79 3L:4539026-4539093 7 55 1497 FBgn0035557 9.256666667 0.366666667 0.553333333 5.941663666 150 99.39759036 1 -6 -2.5 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 4552958 4552965 + 3L_4552958_4552965_+ 0.500116541 0.324983053 0.412549797 0.123838015 CG11357 FBtr0304987|FBtr0113142|FBtr0073310|FBtr0113143 4552565|4552565|4552565|4552565 4553457|4553457|4553457|4553457 3L + 4552882 4553094 3'utr CG11357 FlyBase G28116.1 AAACTCTAATAGCGGCAACAATAAACGGAGCGCATAACCTTAAGCACAACTCTTAAATCGTAAGAAAACTACAATAGTACTTAATAAACGATAAAATGATTGAAAACTGCTGAAATCAGTGAATAACCAAACCAAATATTGATTTCGATGTAGATCGCGTAACAGTGGACGGAAATATTTATTAAAAAGTATATATACGTAGGGGCAAACGAA 240 4552956 0.930647674 33 229 1274 0.959854015 1.942834494 0.145985401 0.133333333 0.240875912 240 9 2 263 3L:4552882-4553094 8 CG11357 FBtr0113143|FBtr0073310|FBtr0113142|FBtr0304987 4552565|4552565|4552565|4552565 4553457|4553457|4553457|4553457 GTACTTAA 8mer-A1 dme-miR-252-5p 3L + 4552884 4553073 3'utr CG11357 FlyBase G21296.1 ACTCTAATAGCGGCAACAATAAACGGAGCGCATAACCTTAAGCACAACTCTTAAATCGTAAGAAAACTACAATAGTACTTAATAAACGATAAAATGATTGAAAACTGCTGAAATCAGTGAATAACCAAACCAAATATTGATTTCGATGTAGATCGCGTAACAGTGGACGGAAATATTTATTAAAAAGTAT 164 4552956 0.967506674 22 154 818 0.95703125 1.91204483 0.12109375 0.420731707 0.62890625 164 9 2 245 3L:4552884-4553073 8 52 1498 FBgn0035558 4857.766667 204.6066667 314.1433333 0.010704508 0.254146167 0.165529535 2 2 2 0.25 dme-miR-277-3p 6mer2-7 GCATTT 3L 4593187 4593192 - 3L_4593187_4593192_- 0.845313224 0.528551353 0.686932288 0.223984417 Src64B FBtr0343995|FBtr0304989|FBtr0304990 4592893|4592893|4592445 4594640|4594640|4594640 3L - 4593171 4593217 3'utr Src64B FlyBase G34374.1 TTCTGTAGCATAAAACCAAAGTTTAGCATTTCGTATTGAGATATATG 14 4593196 0.779006446 4 12 79 0.857142857 1.255272505 0 0.285714286 0.523809524 14 3 0 18 3L:4593171-4593217 6 Src64B FBtr0304989|FBtr0304990|FBtr0343995 4592893|4592445|4592893 4594640|4594640|4594640 GCATTT 6mer2-7 dme-miR-277-3p 3L - 4593174 4593229 3'utr Src64B FlyBase G25997.1 ATTGTGTGCACATTCTGTAGCATAAAACCAAAGTTTAGCATTTCGTATTGAGATAT 10 4593196 0.974891474 3 10 67 1 1.113943352 0.307692308 0.3 0.461538462 10 0 0 13 3L:4593174-4593229 6 11 1499 FBgn0262733 767.5933333 20.04333333 30.95666667 0.014330505 0.54881091 0.355335415 4 4 4 0.25 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 3L 4629397 4629402 + 3L_4629397_4629402_+ 0.490444078 0.850946489 0.670695283 0.254913692 Rpd3 FBtr0073317|FBtr0073317 4629114|4629114 4629467|4629467 3L + 4629368 4629407 3'utr Rpd3 FlyBase G28132.1 AGTGTATAGCTAAGCAAAAAGTGAATGCATACTTACAAGC 9 4629396 0.929642568 3 9 35 1 1.079181246 0 0.333333333 0.5 9 0 0 12 3L:4629368-4629407 6 Rpd3 FBtr0073317|FBtr0073317 4629114|4629114 4629467|4629467 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 3L + 4629343 4629427 3'utr Rpd3 FlyBase G21307.1 AAACACAATTTATTTTAAGATCGAAAGTGTATAGCTAAGCAAAAAGTGAATGCATACTTACAAGCGATCCAATGTGGCGAATAAC 12 4629399 0.957794195 7 10 50 1 1.079181246 0 0.2 0.333333333 10 0 0 12 3L:4629343-4629427 6 6.5 1500 FBgn0015805 1165.29 66.60666667 101.9933333 0.005578011 0.097587829 0.063729656 1 -2 -0.5 0.25 dme-miR-14-3p 7mer-A1 AGACTGA 3L 5158850 5158856 - 3L_5158850_5158856_- 0.823097991 0.821319089 0.82220854 0.001257872 shep FBtr0308859|FBtr0077174|FBtr0333288|FBtr0333289 5157906|5155819|5155819|5158793 5162466|5162466|5162466|5162466 3L - 5158828 5158871 5'utr shep FlyBase G34491.1 ACGATTATTTGCTTTAGACTGACTACGAACTGAAACTGTAACAA 9 5158858 0.976034573 6 9 65 1 1.041392685 0.181818182 0.111111111 0.272727273 9 0 0 11 3L:5158828-5158871 7 shep FBtr0333288|FBtr0333289|FBtr0308859|FBtr0077174 5155819|5158793|5157906|5155819 5162466|5162466|5162466|5162466 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 5158807 5158869 5'utr shep FlyBase G26066.1 GATTATTTGCTTTAGACTGACTACGAACTGAAACTGTAACAATAACAACAAATGCAGGATTGT 7 5158858 0.982139748 4 7 51 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 3L:5158807-5158869 7 7 1501 FBgn0052423 9763.176667 275.8933333 425.4466667 0.00071698 0.025372124 0.016453296 2 2 2 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3L 5159263 5159269 - 3L_5159263_5159269_- 0.511846747 0.519182517 0.515514632 0.005187194 shep FBtr0308859|FBtr0077174|FBtr0333288|FBtr0333289 5157906|5155819|5155819|5158793 5162466|5162466|5162466|5162466 3L - 5159254 5159287 5'utr shep FlyBase G34492.1 AAGCCTAAGCATTGTATTTGTGATTTTTTCGAAT 23 5159270 0.666961311 4 21 237 0.966666667 1.462397998 0.033333333 0.217391304 0.4 23 1 0 29 3L:5159254-5159287 7 shep FBtr0333288|FBtr0333289|FBtr0308859|FBtr0077174 5155819|5158793|5157906|5155819 5162466|5162466|5162466|5162466 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 5159251 5159283 5'utr shep FlyBase G26067.1 CTAAGCATTGTATTTGTGATTTTTTCGAATGTT 6 5159270 0.71937558 4 6 72 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3L:5159251-5159283 7 13.5 1502 FBgn0052423 9763.176667 275.8933333 425.4466667 0.001382747 0.048931954 0.031731357 1 1 1 0.25 dme-miR-7-5p 6mer3-8 GTCTTC 3L 5343811 5343816 - 3L_5343811_5343816_- 0.471047449 0.49203317 0.48154031 0.014839201 lama FBtr0077160|FBtr0077159|FBtr0333595|FBtr0077161 5343617|5343617|5343617|5343617 5343995|5343995|5343995|5343995 3L - 5343737 5343862 3'utr lama FlyBase G34511.1 TCGTATAATTTGTGTGTTCCTAGTTGGTACATATCTTACGTCCATAGTCTTCTAGTGTCTACTGTACTTATGTATGTATGCGTGTCCAATCGATTATTGTCTTCCAGCTGTACAGCTTTTTATTTT 166 5343827 0.778232526 21 154 1685 0.929648241 1.966141733 0.155778894 0.180722892 0.316582915 166 13 1 185 3L:5343737-5343862 6 lama FBtr0077160|FBtr0077159|FBtr0333595|FBtr0077161 5343617|5343617|5343617|5343617 5343995|5343995|5343995|5343995 GTCTTC 6mer3-8 dme-miR-7-5p 3L - 5343729 5343879 3'utr lama FlyBase G26083.1 TAGTGTCCTGTCTTGTCTCGTATAATTTGTGTGTTCCTAGTTGGTACATATCTTACGTCCATAGTCTTCTAGTGTCTACTGTACTTATGTATGTATGCGTGTCCAATCGATTATTGTCTTCCAGCTGTACAGCTTTTTATTTTCCGTAGGT 116 5343827 0.958983483 29 111 1139 0.971264368 2.227886705 0.172413793 0.387931034 0.591954023 116 5 0 169 3L:5343729-5343879 6 69.5 1503 FBgn0016031 538.5966667 18.35333333 28.06333333 0.129039046 3.78677806 2.476541157 11 11 11 0.25 dme-miR-12-5p 7mer-A1 ATACTCA 3L 5356869 5356875 - 3L_5356869_5356875_- 0.782044169 0.611769519 0.696906844 0.120402395 Klp64D FBtr0077157 5356862 5357220 3L - 5356862 5356905 3'utr Klp64D FlyBase G34519.1 GTGTGCTCTTGGCTTTTAAATAAAAATATGATACTCACACGTAA 30 5356877 0.80619775 6 29 200 0.96969697 1.505149978 0.242424242 0.1 0.181818182 30 1 0 32 3L:5356862-5356905 7 Klp64D FBtr0077157 5356862 5357220 ATACTCA 7mer-A1 dme-miR-12-5p 3L - 5356863 5356929 3'utr Klp64D FlyBase G26088.1 ATTAGGCACAAATATATAACTATTGTGTGCTCTTGGCTTTTAAATAAAAATATGATACTCACACGTA 21 5356877 0.944069004 6 21 122 1 1.505149978 0.0625 0.428571429 0.625 21 0 0 32 3L:5356863-5356929 7 16.5 1504 FBgn0004380 595.0833333 28.55 43.68333333 0.027727209 0.57793345 0.377718428 2 2 2 0.25 dme-miR-184-3p 6mer2-7 CCGTCC 3L 5559567 5559572 - 3L_5559567_5559572_- 0.950399783 0.995886067 0.973142925 0.032163671 sinu FBtr0077136 5559468 5560751 3L - 5559503 5559625 3'utr sinu FlyBase G34543.1 ATTTTCTAAACCGAGAATTTAGCAATGTATTAAAGCAATACATACGTCTTTTACCGTCCCATATACAATAATATGTGTAACATTTTTATGTACAAACGACTTTTAGCTAAAGCGAAGAATAAT 414 5559574 0.749079152 20 401 2901 0.968565815 1.847748879 0.074656189 0.18115942 0.333988212 414 10 6 493 3L:5559503-5559625 6 sinu FBtr0077136 5559468 5560751 CCGTCC 6mer2-7 dme-miR-184-3p 3L - 5559545 5559594 3'utr sinu FlyBase G26109.2 AAAGCAATACATACGTCTTTTACCGTCCCATATACAATAATATGTGTAAC 203 5559574 0.64272732 8 190 1495 0.94137931 1.959041392 0.031034483 0.310344828 0.517241379 203 15 2 273 3L:5559545-5559594 6 237 1505 FBgn0010894 232.6666667 13.51333333 20.52333333 1.018624642 17.53823384 11.54783174 2 2 2 0.25 dme-miR-184-3p 7mer-m8 TCCGTCC 3L 5559644 5559650 - 3L_5559644_5559650_- 0.622835882 0.606536219 0.614686051 0.011525628 sinu FBtr0077136 5559468 5560751 3L - 5559630 5559683 3'utr sinu FlyBase G34543.2 TTTTAAAGGTAACAATTAGGTCTGTATTAATCATCCGTCCTTTGCACGTATTTG 441 5559643 0.644803719 12 389 4167 0.874766355 0.945969983 0.143925234 0.183673469 0.327102804 441 15 52 468 3L:5559630-5559683 7 sinu FBtr0077136 5559468 5560751 TCCGTCC 7mer-m8 dme-miR-184-3p 3L - 5559631 5559679 3'utr sinu FlyBase G26110.1 AAAGGTAACAATTAGGTCTGTATTAATCATCCGTCCTTTGCACGTATTT 325 5559643 0.697642387 14 275 3109 0.845338983 0.852784869 0.165254237 0.335384615 0.542372881 325 18 55 399 3L:5559631-5559679 7 364.5 1506 FBgn0010894 232.6666667 13.51333333 20.52333333 1.566618911 26.97335964 17.76027286 -7 -7 -7 0.25 dme-miR-184-3p 7mer-m8 TCCGTCC 3L 5560606 5560612 - 3L_5560606_5560612_- 0.471645958 0.46907103 0.470358494 0.0018208 sinu FBtr0077136 5559468 5560751 3L - 5560583 5560641 3'utr sinu FlyBase G34547.2 CAACCAAGAGGAAAACAAAACAAAAACATTCCGTCCCCTCAAAGAATTCTCACCCTAAA 2305 5560613 0.949504949 5 2278 7692 0.991147309 2.492760389 0.002832861 0.18308026 0.333215297 2305 17 8 2799 3L:5560583-5560641 7 sinu FBtr0077136 5559468 5560751 TCCGTCC 7mer-m8 dme-miR-184-3p 3L - 5560562 5560640 3'utr sinu FlyBase G26115.1 AACCAAGAGGAAAACAAAACAAAAACATTCCGTCCCCTCAAAGAATTCTCACCCTAAACATTACAGTCGAACTTCTCTA 1540 5560613 0.945764769 10 1526 5069 0.988743809 2.438542349 0.000900495 0.319480519 0.528140477 1540 18 7 2196 3L:5560562-5560640 7 1910.5 1507 FBgn0010894 232.6666667 13.51333333 20.52333333 8.211318052 141.3788851 93.0891668 1 1 1 0.25 dme-miR-986-5p 7mer-m8 ATTCGAG 3L 5564931 5564937 + 3L_5564931_5564937_+ 0.583304315 0.557784222 0.570544269 0.018045436 Sras FBtr0077083 5564827 5565103 3L + 5564918 5564953 3'utr Sras FlyBase G28194.1 AATTGCATATCCCATTCGAGCCAATTCCGCGCACAA 26 5564932 0.737980404 2 26 142 1 1.491361694 0 0.192307692 0.322580645 26 0 0 31 3L:5564918-5564953 7 Sras FBtr0077083 5564827 5565103 ATTCGAG 7mer-m8 dme-miR-986-5p 3L + 5564906 5564955 3'utr Sras FlyBase G21345.1 TGTTTATATGTAAATTGCATATCCCATTCGAGCCAATTCCGCGCACAAAA 21 5564932 0.965155172 4 20 116 1 1.462397998 0 0.285714286 0.482758621 21 0 0 29 3L:5564906-5564955 7 23 1508 FBgn0029121 69.33333333 6.623333333 10.01666667 0.331730769 3.472571716 2.296173045 -1 -1 -1 0.25 dme-miR-33-5p 8mer-A1 CAATGCAA 3L 5566343 5566350 + 3L_5566343_5566350_+ 0.574981662 0.610780408 0.592881035 0.025313504 bc10 FBtr0077084 5565863 5566765 3L + 5566223 5566377 3'utr bc10 FlyBase G28198.1 TAAAGCTTAGACGAATTTAGTTTATACGAAGAAAGCGCTACGAAAACGTATTGTACATCACCCCACCCAAAAGCCCTACCCTTCAAATCAAAAGAAAAAACCCCTATCCAACCCACTTGTCAATGCAACTTACGATTAGTCATATATGTTATATA 135 5566342 0.974351947 20 126 770 0.949685535 1.701855693 0.050314465 0.148148148 0.27672956 135 6 2 151 3L:5566223-5566377 8 bc10 FBtr0077084 5565863 5566765 CAATGCAA 8mer-A1 dme-miR-33-5p 3L + 5566318 5566388 3'utr bc10 FlyBase G21351.1 AAAAACCCCTATCCAACCCACTTGTCAATGCAACTTACGATTAGTCATATATGTTATATATAGATAAATAC 42 5566342 0.979956428 8 37 263 0.921875 1.770852012 0.046875 0.404761905 0.609375 42 5 0 59 3L:5566318-5566388 8 62.5 1509 FBgn0040239 273.54 24.22 36.96666667 0.228485779 2.580511974 1.690712353 1 1 1 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA 3L 5590070 5590077 + 3L_5590070_5590077_+ 0.477558028 0.551919477 0.514738753 0.052581521 l(3)psg2 FBtr0077085 5589915 5590390 3L + 5590048 5590128 3'utr l(3)psg2 FlyBase G28229.1 AATTGACCATTTGTAAACAAGTTGCATTTATTCATAGAAGGTCGTTTTCGATTTATTCAGCTTTAGGTTTCTATGTCATTT 31 5590069 0.892120342 5 31 292 1 1.591064607 0.102564103 0.225806452 0.384615385 31 0 0 39 3L:5590048-5590128 8 l(3)psg2 FBtr0077085 5589915 5590390 TGCATTTA 8mer-A1 dme-miR-277-3p 3L + 5590057 5590089 3'utr l(3)psg2 FlyBase G21376.1 TTTGTAAACAAGTTGCATTTATTCATAGAAGGT 14 5590069 0.893072524 2 11 100 0.85 1.230448921 0.1 0.285714286 0.5 14 3 0 17 3L:5590057-5590089 8 17 1510 FBgn0035617 542.34 10 15.43333333 0.03134565 1.7 1.101511879 1 1 1 0.25 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 5601193 5601198 - 3L_5601193_5601198_- 0.997597175 0.51995302 0.758775097 0.337745453 CG10590 FBtr0077127 5601094 5601788 3L - 5601113 5601219 3'utr CG10590 FlyBase G34576.1 AATCTATGCAACTGCAACAAAATGTGACTTGAACTTGTTTGCGCCAATTAAGTTATGTACGATGCAAGAAATGTGCTGATTAGCAATAGTCGATAATCTAATAATAA 51 5601196 0.748760014 15 49 303 0.96969697 1.806179974 0.196969697 0.254901961 0.424242424 51 2 0 64 3L:5601113-5601219 6 CG10590 FBtr0077127 5601094 5601788 ATGTGA 6mer3-8 dme-miR-1003-3p 3L - 5601110 5601220 3'utr CG10590 FlyBase G26140.1 CAATCTATGCAACTGCAACAAAATGTGACTTGAACTTGTTTGCGCCAATTAAGTTATGTACGATGCAAGAAATGTGCTGATTAGCAATAGTCGATAATCTAATAATAAATT 39 5601191 0.979165506 14 36 252 0.948275862 1.740362689 0.206896552 0.384615385 0.586206897 39 3 0 55 3L:5601110-5601220 6 27 1511 FBgn0035622 320.01 14.52333333 22.10333333 0.084372363 1.859077347 1.221535213 -2 -7 -4.5 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA 3L 5601454 5601461 - 3L_5601454_5601461_- 0.603575401 0.578753875 0.591164638 0.017551451 CG10590 FBtr0077127 5601094 5601788 3L - 5601430 5601498 3'utr CG10590 FlyBase G34577.1 ATTTGGGAAAACATTGTGAATTAAAAGCTCTTTCTGTTGCATTTACGTTTTGCTAGTTTTAAGAGTCAA 13 5601462 0.99246232 7 12 133 0.933333333 1.146128036 0.2 0.153846154 0.266666667 13 1 0 14 3L:5601430-5601498 8 CG10590 FBtr0077127 5601094 5601788 TGCATTTA 8mer-A1 dme-miR-277-3p 3L - 5601431 5601499 3'utr CG10590 FlyBase G26141.1 AATTTGGGAAAACATTGTGAATTAAAAGCTCTTTCTGTTGCATTTACGTTTTGCTAGTTTTAAGAGTCA 14 5601485 0.985715514 5 13 113 0.947368421 1.255272505 0.473684211 0.214285714 0.421052632 14 1 0 18 3L:5601431-5601499 8 7.5 1512 FBgn0035622 320.01 14.52333333 22.10333333 0.023436768 0.516410374 0.339315337 1 24 12.5 0.25 dme-miR-14-3p 7mer-A1 AGACTGA 3L 5750322 5750328 - 3L_5750322_5750328_- 0.823271116 0.821208626 0.822239871 0.001458408 DnaJ-1 FBtr0077124|FBtr0077123 5750027|5750027 5750588|5750588 3L - 5750070 5750551 3'utr DnaJ-1 FlyBase G34598.1 CGCATATAATTGTTATCACTTTAGTTAAGGCCTATATTTAATTTACCGTACGTACTCGTAAGACAACTTAGCCTAACCAATTGTAGCCCTAAGCTAGTGAGTGTGCCAAGCGAAGAGCTGTAGATATTGGCCGAGGATGCAAGCGCTGGATAGGATTAGGAAAGAGAACAACACACACACACACACACACATAAAGCAGCCCGTGTAGCCCGTTTCGTGTTGGAGACTGATCGATTATTAGCTATTTAGCATTACACAAATTCCATAAGTTGTTTTGTTTACCGCCACATGAATCGGTGCCTCAACATCTTATACATAATAATCCCAAAACAAAATATTAAATAAATGAGGTATTATAAATTTAAAGTAACTAACCATTTTTCAAGCAAAGCACATTTTCGGCATTCCAACACGGGGAGGTTACATCAGTTAGTAGAACACTTATAGATTTATACGCCGTAAGGACATAGTACGTTTTAGTA 679 5750336 0.971579659 70 613 3762 0.910539216 1.829596129 0.234068627 0.176730486 0.31495098 679 63 10 743 3L:5750070-5750551 7 DnaJ-1 FBtr0077124|FBtr0077123 5750027|5750027 5750588|5750588 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 5750185 5750496 3'utr DnaJ-1 FlyBase G26155.1 TCGTAAGACAACTTAGCCTAACCAATTGTAGCCCTAAGCTAGTGAGTGTGCCAAGCGAAGAGCTGTAGATATTGGCCGAGGATGCAAGCGCTGGATAGGATTAGGAAAGAGAACAACACACACACACACACACACATAAAGCAGCCCGTGTAGCCCGTTTCGTGTTGGAGACTGATCGATTATTAGCTATTTAGCATTACACAAATTCCATAAGTTGTTTTGTTTACCGCCACATGAATCGGTGCCTCAACATCTTATACATAATAATCCCAAAACAAAATATTAAATAAATGAGGTATTATAAATTTAAAG 410 5750337 0.975410799 48 353 2257 0.861685215 2.256878032 0.255961844 0.395121951 0.60572337 410 85 2 542 3L:5750185-5750496 7 179.5 1513 FBgn0263106 2505.54 158.3466667 242.02 0.071641243 1.13358875 0.741674242 8 9 8.5 0.25 dme-miR-11-3p 7mer-m1 TGTGATG 3L 576386 576392 + 3L_576386_576392_+ 0.61201141 0.612024944 0.612018177 9.55E-06 hipk FBtr0072552 574200 581099 3L + 576102 576567 3'utr hipk FlyBase G26826.1 TCGTAGTTAGAATTAAACTTAACTTTCGCGATAAAATAACCAAGCAGCAACTAATTTTTCGCCCTCCTGGGGTCGATTACTCGGTTGTCCCAACCGAGAATTTATTAAAATCGGTCCTTCGAGGGAGGCACTTCCTATATAATGAATTACATGCTGATACAAAGCAGAAATATTTAAACCATCCTTCGCCCCTTCCTAGATCAGCTGTGTACAGTAGGCTATTTTGGGATCGGGATCGAGATGAATCAACTCCGACGATTGGAAAAGATCTAGCATATAATTATTGTGATGTAGTTTTTAACGAGGAGCAGAGAAGTCCGCAAACGTTTTTTGTCAGTCGTCGTCGTCGTCGTCGGCGAATAGAAATTACCTAAAATTACGAATAACCAATTGCGATACGGATACGGAATATGCATCTATATGTTAACTAATTAGTGTGCAGGATTCAATAGCGTTAGCACGACAA 2062 576384 0.895443614 90 1833 20753 0.89198172 1.553680794 0.374740341 0.143549952 0.266306606 2062 201 59 2147 3L:576102-576567 7 hipk FBtr0072552 574200 581099 TGTGATG 7mer-m1 dme-miR-11-3p 3L + 576212 576418 3'utr hipk FlyBase G20292.1 TCGGTCCTTCGAGGGAGGCACTTCCTATATAATGAATTACATGCTGATACAAAGCAGAAATATTTAAACCATCCTTCGCCCCTTCCTAGATCAGCTGTGTACAGTAGGCTATTTTGGGATCGGGATCGAGATGAATCAACTCCGACGATTGGAAAAGATCTAGCATATAATTATTGTGATGTAGTTTTTAACGAGGAGCAGAGAAGT 1293 576384 0.863780343 34 1041 14107 0.799591002 1.28575173 0.440695297 0.373549884 0.585889571 1293 312 80 1564 3L:576212-576418 7 1390 1514 FBgn0035142 10724.84 157.7366667 241.6366667 0.129605663 8.81215528 5.752438234 2 2 2 0.25 dme-miR-970-3p 7mer-A1 CTTATGA 3L 577254 577260 + 3L_577254_577260_+ 0.543605803 0.611329112 0.577467457 0.047887605 hipk FBtr0072552 574200 581099 3L + 577196 577276 3'utr hipk FlyBase G26827.4 AAAACAAGAAAACAAATCATGAACGCTTTAAATGTAACAAAAACGAAACGTTAATAGACTTATGAAAACAACAAACAAATT 569 577250 0.958469704 11 552 2852 0.973611111 2.368596763 0.118055556 0.20913884 0.375 569 17 2 701 3L:577196-577276 7 hipk FBtr0072552 574200 581099 CTTATGA 7mer-A1 dme-miR-970-3p 3L + 577196 577277 3'utr hipk FlyBase G20296.1 AAAACAAGAAAACAAATCATGAACGCTTTAAATGTAACAAAAACGAAACGTTAATAGACTTATGAAAACAACAAACAAATTA 414 577250 0.954887489 10 405 2070 0.979166667 2.183981219 0.088141026 0.376811594 0.586538462 414 10 3 611 3L:577196-577277 7 460.5 1515 FBgn0035142 10724.84 157.7366667 241.6366667 0.042937703 2.919422666 1.905753818 4 4 4 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 5777529 5777535 - 3L_5777529_5777535_- 0.748358161 0.751731886 0.750045023 0.002385566 Myt1 FBtr0077118|FBtr0077118|FBtr0077118 5777474|5777474|5777474 5777763|5777763|5777763 3L - 5777515 5777584 3'utr Myt1 FlyBase G34629.1 AATGTTAATGCTTCTTTAGAAGAACTTGTTGAACTTGAACATATAATCATGTGATATATATACGAAAAGC 28 5777539 0.853584963 9 23 197 0.921052632 1.243038049 0.184210526 0.25 0.447368421 28 2 1 35 3L:5777515-5777584 7 Myt1 FBtr0077118|FBtr0077118|FBtr0077118 5777474|5777474|5777474 5777763|5777763|5777763 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 5777498 5777555 3'utr Myt1 FlyBase G26181.1 TGAACTTGAACATATAATCATGTGATATATATACGAAAAGCGATTTGAAAAGTTTAAA 21 5777538 0.970630995 7 17 157 0.814814815 1.041392685 0.074074074 0.238095238 0.407407407 21 4 1 22 3L:5777498-5777555 7 19 1516 FBgn0040298 171.3866667 10.89333333 16.77 0.110860433 1.744186047 1.132975552 4 3 3.5 0.25 dme-miR-932-5p 6mer2-7 GAATTG 3L 5799004 5799009 - 3L_5799004_5799009_- 0.779369451 0.707435178 0.743402314 0.050865231 S6k FBtr0077114|FBtr0333264 5798946|5797547 5800429|5800429 3L - 5798976 5799039 3'utr S6k FlyBase G34651.1 AAGATGTCAAATATAATCAAAAGGTGCTTTGAATTGTTTAAAAAGACAAGACAACTACAGATTA 144 5799011 0.716662542 11 139 1020 0.969512195 1.900367129 0.018292683 0.125 0.231707317 144 4 1 159 3L:5798976-5799039 6 S6k FBtr0077114|FBtr0333264 5798946|5797547 5800429|5800429 GAATTG 6mer2-7 dme-miR-932-5p 3L - 5798997 5799039 3'utr S6k FlyBase G26200.1 AAGATGTCAAATATAATCAAAAGGTGCTTTGAATTGTTTAAAA 82 5799011 0.721595786 5 78 582 0.962616822 2.012837225 0 0.219512195 0.401869159 82 4 0 103 3L:5798997-5799039 6 110.5 1517 FBgn0015806 3238.726667 104.32 160.0233333 0.034118347 1.059240798 0.690524299 2 2 2 0.25 dme-miR-33-5p 7mer-A1 AATGCAA 3L 5812155 5812161 + 3L_5812155_5812161_+ 0.781196878 0.780996583 0.781096731 0.000141633 CG5537 FBtr0310534 5811928 5812228 3L + 5812008 5812208 intron-3'utr CG5537 FlyBase G28303.1 CCTGCGTTGCGCTCCACTAACAAATGCTACCCTCTCTCACTCTGTTTCGTCCTCCAGATTGCATTTGAGACACACAGACAAATAGACGACCCCTGCGGCCAACCAAACTACTACTTAGCAACTGTTAGCTTTTCACAACTGGCTTTTAATGCAACTCTCAAATACGTTACGTTCGTTACGCACTATTGTAAATATAGAAAC 178 5812132 0.991458247 29 170 1114 0.952606635 2.303196057 0.09478673 0.151685393 0.28436019 178 10 0 201 3L:5812008-5812208 7 CG5537 FBtr0310534 5811928 5812228 AATGCAA 7mer-A1 dme-miR-33-5p 3L + 5812042 5812172 intron-3'utr CG5537 FlyBase G21437.1 TCTCACTCTGTTTCGTCCTCCAGATTGCATTTGAGACACACAGACAAATAGACGACCCCTGCGGCCAACCAAACTACTACTTAGCAACTGTTAGCTTTTCACAACTGGCTTTTAATGCAACTCTCAAATAC 100 5812157 0.990433733 16 93 650 0.956521739 2.187520721 0.093167702 0.41 0.633540373 100 7 0 154 3L:5812042-5812172 7 44 1518 FBgn0035639 210.32 23.03 35.33333333 0.209205021 1.910551455 1.245283019 23 -2 10.5 0.25 dme-miR-252-5p 7mer-m8 GTACTTA 3L 582937 582943 - 3L_582937_582943_- 0.581036404 0.574183798 0.577610101 0.00484552 Kah FBtr0072563 582822 583983 3L - 582917 583044 3'utr Kah FlyBase G33052.1 CGATTCGACTCGATTCACTCCGATTCGATCTACAGCTCTACAGCTAATCGCACCAAAGATACTTCGATTTAGATGCGCACGCATACTACCTTTATTTACTCGTACTTACCATATACACCAAAAGATAT 70 582951 0.981867481 18 64 470 0.911392405 1.857332496 0.151898734 0.128571429 0.227848101 70 7 0 72 3L:582917-583044 7 Kah FBtr0072563 582822 583983 GTACTTA 7mer-m8 dme-miR-252-5p 3L - 582920 583041 3'utr Kah FlyBase G25000.1 TTCGACTCGATTCACTCCGATTCGATCTACAGCTCTACAGCTAATCGCACCAAAGATACTTCGATTTAGATGCGCACGCATACTACCTTTATTTACTCGTACTTACCATATACACCAAAAGA 62 582951 0.966015266 20 52 398 0.867346939 1.452297671 0.102040816 0.370967742 0.602040816 62 11 2 85 3L:582920-583041 7 4.5 1519 FBgn0035144 229 9.92 15.31333333 0.019650655 0.453629032 0.293861559 8 8 8 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3L 583302 583308 - 3L_583302_583308_- 0.660997203 0.661098852 0.661048027 7.19E-05 Kah FBtr0072563 582822 583983 3L - 583217 583365 3'utr Kah FlyBase G33054.1 AAGGCATTGATCGGCTTCCTGCTTCCGGCACGGAAGTCGTTCCAAAACGAGAGAATTTCTAGTCTTTATATTTAAATAAAGCGCACATTTGGCGAGATCGGGAGCATTCCCGATCCCATCCCCTTTTGTGCGTGGCGTTACTTTAAGCA 267 583309 0.864403061 18 255 2569 0.952229299 2.174641193 0.544585987 0.119850187 0.251592357 267 14 1 299 3L:583217-583365 7 Kah FBtr0072563 582822 583983 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3L - 583279 583327 3'utr Kah FlyBase G25003.1 GTTCCAAAACGAGAGAATTTCTAGTCTTTATATTTAAATAAAGCGCACA 180 583309 0.988777763 10 169 1757 0.948412698 1.679427897 0.511904762 0.3 0.5 180 9 4 239 3L:583279-583327 7 207.5 1520 FBgn0035144 229 9.92 15.31333333 0.906113537 20.91733871 13.55028298 1 1 1 0.25 dme-miR-31a-5p 7mer-A1 CTTGCCA 3L 583590 583596 - 3L_583590_583596_- 0.676452157 0.817601153 0.747026655 0.099807415 Kah FBtr0072563 582822 583983 3L - 583435 583745 3'utr Kah FlyBase G33055.2 CACAGCTCGTCGAACAGAAGAGTTCCCTCTTCTCGGAAAACTCCAAGGAAGGCGAGGTCATACACAGTAGATATAGAGAGACAAGGTTGGATCGATTCCCGATTGATCGTTTGATCTTCACTTAGTTGTAATAAGAGACTTCTTAGAGACTTGCCAAGAACAGCGACAAAAAACCAATGTAACCAGTATTTTTTTATAGCACATACGATTACCGATCGATCGGAGAGCGAAAGATATAGCATCCCAGCCCCAGACGATCGAACTCCGCAGCCAAGCTACAAACTTTACACATAGTCATCTAGCTTTATGAT 243 583603 0.983808384 46 227 1793 0.934782609 1.809559715 0.170289855 0.111111111 0.217391304 243 15 3 258 3L:583435-583745 7 Kah FBtr0072563 582822 583983 CTTGCCA 7mer-A1 dme-miR-31a-5p 3L - 583507 583705 3'utr Kah FlyBase G25007.1 CTCCAAGGAAGGCGAGGTCATACACAGTAGATATAGAGAGACAAGGTTGGATCGATTCCCGATTGATCGTTTGATCTTCACTTAGTTGTAATAAGAGACTTCTTAGAGACTTGCCAAGAACAGCGACAAAAAACCAATGTAACCAGTATTTTTTTATAGCACATACGATTACCGATCGATCGGAGAGCGAAAGATATAG 172 583603 0.984080487 37 158 1240 0.92519685 2.371067862 0.18503937 0.360465116 0.566929134 172 19 0 235 3L:583507-583705 7 67.5 1521 FBgn0035144 229 9.92 15.31333333 0.294759825 6.804435484 4.407923378 7 7 7 0.25 dme-bantam-3p 6mer3-8 TGATCT 3L 583629 583634 - 3L_583629_583634_- 0.45170244 0.601652575 0.526677508 0.106030803 Kah FBtr0072563 582822 583983 3L - 583435 583745 3'utr Kah FlyBase G33055.2 CACAGCTCGTCGAACAGAAGAGTTCCCTCTTCTCGGAAAACTCCAAGGAAGGCGAGGTCATACACAGTAGATATAGAGAGACAAGGTTGGATCGATTCCCGATTGATCGTTTGATCTTCACTTAGTTGTAATAAGAGACTTCTTAGAGACTTGCCAAGAACAGCGACAAAAAACCAATGTAACCAGTATTTTTTTATAGCACATACGATTACCGATCGATCGGAGAGCGAAAGATATAGCATCCCAGCCCCAGACGATCGAACTCCGCAGCCAAGCTACAAACTTTACACATAGTCATCTAGCTTTATGAT 243 583634 0.983808384 46 227 1793 0.934782609 1.809559715 0.170289855 0.111111111 0.217391304 243 15 3 258 3L:583435-583745 6 Kah FBtr0072563 582822 583983 TGATCT 6mer3-8 dme-bantam-3p 3L - 583507 583705 3'utr Kah FlyBase G25007.1 CTCCAAGGAAGGCGAGGTCATACACAGTAGATATAGAGAGACAAGGTTGGATCGATTCCCGATTGATCGTTTGATCTTCACTTAGTTGTAATAAGAGACTTCTTAGAGACTTGCCAAGAACAGCGACAAAAAACCAATGTAACCAGTATTTTTTTATAGCACATACGATTACCGATCGATCGGAGAGCGAAAGATATAG 172 583605 0.984080487 37 158 1240 0.92519685 2.371067862 0.18503937 0.360465116 0.566929134 172 19 0 235 3L:583507-583705 6 57.5 1522 FBgn0035144 229 9.92 15.31333333 0.251091703 5.796370968 3.754897693 0 -29 -14.5 0.25 dme-miR-184-5p 6mer3-8 TGATAA 3L 583807 583812 - 3L_583807_583812_- 0.508994423 0.528635768 0.518815095 0.013888567 Kah FBtr0072563 582822 583983 3L - 583749 583892 3'utr Kah FlyBase G33056.1 TGCCACTTAATCCAAGTCCTTTCACAGCCCACCAGCCACCACCAATCCAGGACATTTTCTTACTGTAGTCAACGAATATGTGATAATAATGCAAAAGAGCTAAAGTACCATTAGAGAGTAGATGATTCCAGAGCAAAGAGGAGC 148 583816 0.972201018 22 142 839 0.966292135 1.934498451 0.179775281 0.155405405 0.297752809 148 5 1 172 3L:583749-583892 6 Kah FBtr0072563 582822 583983 TGATAA 6mer3-8 dme-miR-184-5p 3L - 583755 583844 3'utr Kah FlyBase G25008.1 AGGACATTTTCTTACTGTAGTCAACGAATATGTGATAATAATGCAAAAGAGCTAAAGTACCATTAGAGAGTAGATGATTCCAGAGCAAAG 80 583816 0.721174301 13 74 436 0.938596491 1.552262523 0.192982456 0.3125 0.51754386 80 5 2 107 3L:583755-583844 6 82 1523 FBgn0035144 229 9.92 15.31333333 0.358078603 8.266129032 5.354810623 4 4 4 0.25 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3L 5928249 5928255 + 3L_5928249_5928255_+ 0.593216983 0.468225916 0.53072145 0.088382054 Vap-33B FBtr0306383 5926792 5930120 3L + 5928226 5928272 3'utr Vap-33B FlyBase G28311.1 CACCTTTGTCGATTCCGCTCCCATGGTGCTCAAGGAGACCAACATCA 12 5928249 0.967132978 3 12 66 1 1.146128036 0.071428571 0.166666667 0.285714286 12 0 0 14 3L:5928226-5928272 7 Vap-33B FBtr0306383 5926792 5930120 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3L + 5928224 5928263 3'utr Vap-33B FlyBase G21446.1 GTCACCTTTGTCGATTCCGCTCCCATGGTGCTCAAGGAGA 8 5928249 0.816999137 3 8 43 1 0.954242509 0.666666667 0.125 0.222222222 8 0 0 9 3L:5928224-5928263 7 10 1524 FBgn0053523 440.65 33.85333333 51.73666667 0.022693748 0.295391887 0.193286515 0 0 0 0.25 dme-miR-965-3p 8mer-A1 TACGCTTA 3L 5930509 5930516 - 3L_5930509_5930516_- 0.484560997 0.559715682 0.522138339 0.053142398 Rcc1 FBtr0077076|FBtr0077075|FBtr0077074 5930260|5930260|5930260 5930578|5930578|5930578 3L - 5930489 5930531 3'utr Rcc1 FlyBase G34677.2 TAAGTTACGAACCCGTACGCTTACCCTACGCTTAAGGAAGGCA 56 5930516 0.964751403 4 54 225 0.974025974 1.574031268 0.038961039 0.321428571 0.506493506 56 1 1 75 3L:5930489-5930531 8 Rcc1 FBtr0077076|FBtr0077075|FBtr0077074 5930260|5930260|5930260 5930578|5930578|5930578 TACGCTTA 8mer-A1 dme-miR-965-3p 3L - 5930446 5930530 3'utr Rcc1 FlyBase G26227.1 AAGTTACGAACCCGTACGCTTACCCTACGCTTAAGGAAGGCAATGAGTAGCCCAGATTCGTAAGATAGATCGGAAATTTTGCTTA 55 5930516 0.963896102 8 53 212 0.962025316 1.880813592 0.063291139 0.381818182 0.569620253 55 3 0 76 3L:5930446-5930530 8 53 1525 FBgn0002638 1072.403333 62.51333333 96.14666667 0.049421704 0.847819132 0.551241159 0 0 0 0.25 dme-miR-965-3p 6mer3-8 TACGCT 3L 5930560 5930565 - 3L_5930560_5930565_- 0.823052993 0.574079077 0.698566035 0.176051133 Rcc1 FBtr0077076|FBtr0077075|FBtr0077074 5930260|5930260|5930260 5930578|5930578|5930578 3L - 5930537 5930602 stop_codon Rcc1 FlyBase G34678.1 AAGCGGGGCGGTAAAAAGACATAAGATTGAGTATAAATACGCTGACTTTCCCACTTTGTTTTTGGT 28 5930565 0.949735432 7 26 167 0.939393939 1.491361694 0.454545455 0.178571429 0.303030303 28 2 0 31 3L:5930537-5930602 6 Rcc1 FBtr0077076|FBtr0077075|FBtr0077074 5930260|5930260|5930260 5930578|5930578|5930578 TACGCT 6mer3-8 dme-miR-965-3p 3L - 5930546 5930601 stop_codon Rcc1 FlyBase G26228.1 AGCGGGGCGGTAAAAAGACATAAGATTGAGTATAAATACGCTGACTTTCCCACTTT 25 5930565 0.837341976 6 21 143 0.888888889 1.505149978 0.555555556 0.36 0.555555556 25 4 0 32 3L:5930546-5930601 6 19 1526 FBgn0002638 1072.403333 62.51333333 96.14666667 0.017717215 0.30393516 0.197614755 0 0 0 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 6096463 6096469 + 3L_6096463_6096469_+ 0.778731454 0.777643488 0.778187471 0.000769332 loj FBtr0301446|FBtr0301446|FBtr0301446|FBtr0301447|FBtr0301447|FBtr0301447|FBtr0301448|FBtr0301448|FBtr0301448 6096261|6096261|6096261|6096261|6096261|6096261|6096261|6096261|6096261 6096517|6096517|6096517|6096517|6096517|6096517|6096517|6096517|6096517 3L + 6096368 6096486 3'utr loj FlyBase G28326.1 ATTTTATCACTGGCTAATTGATCAAGCGCAACTGAGCAGACTTTTTTATAATTGGGACTACTTATGTCATACGAGTTATAGACAGCAAAACTTATTGTGATAAGTGTACATTTGTGTGT 291 6096461 0.983343739 20 277 2110 0.95923913 1.50638202 0.41576087 0.223367698 0.385869565 291 5 10 353 3L:6096368-6096486 7 loj FBtr0301447|FBtr0301447|FBtr0301447|FBtr0301448|FBtr0301448|FBtr0301448|FBtr0301446|FBtr0301446|FBtr0301446 6096261|6096261|6096261|6096261|6096261|6096261|6096261|6096261|6096261 6096517|6096517|6096517|6096517|6096517|6096517|6096517|6096517|6096517 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 6096386 6096480 3'utr loj FlyBase G21456.1 TGATCAAGCGCAACTGAGCAGACTTTTTTATAATTGGGACTACTTATGTCATACGAGTTATAGACAGCAAAACTTATTGTGATAAGTGTACATTT 197 6096461 0.771146132 16 181 1386 0.935153584 1.437750563 0.464163823 0.370558376 0.576791809 197 10 9 274 3L:6096386-6096480 7 144.5 1527 FBgn0061492 141.6666667 16.32666667 25.11333333 1.02 8.850551245 5.753915583 2 2 2 0.25 dme-miR-12-5p 7mer-m8 AATACTC 3L 6169335 6169341 - 3L_6169335_6169341_- 0.650740472 0.674256765 0.662498618 0.016628535 CG10289 FBtr0331790|FBtr0077019 6164914|6167311 6169800|6169800 3L - 6169256 6169403 3'utr CG10289 FlyBase G34702.1 AAGAAAACTGTATTTTGTTTGTAATATGTATTAGTCTGTCGATTTAGTACGCTTTTACTTTCAATACTCTCAATGTGTTAGGCAACCTATGAGCATTACTTAAAGTACCAAAATTCACGCAACGTTTAGAATGCTTAGTTTATATTTG 47 6169348 0.98962322 17 43 418 0.909090909 1.397940009 0.181818182 0.14893617 0.272727273 47 4 1 50 3L:6169256-6169403 7 CG10289 FBtr0077019|FBtr0331790 6167311|6164914 6169800|6169800 AATACTC 7mer-m8 dme-miR-12-5p 3L - 6169302 6169366 3'utr CG10289 FlyBase G26239.1 GTCGATTTAGTACGCTTTTACTTTCAATACTCTCAATGTGTTAGGCAACCTATGAGCATTACTTA 14 6169339 0.988631932 5 10 124 0.8 1 0.4 0.428571429 0.68 14 4 1 20 3L:6169302-6169366 7 13.5 1528 FBgn0035688 1894.98 44.00666667 67.31 0.007124086 0.306771701 0.200564552 7 -2 2.5 0.25 dme-miR-995-5p 6mer3-8 AATTCG 3L 6178832 6178837 - 3L_6178832_6178837_- 0.885178894 0.946374725 0.91577681 0.043271965 CG10274 FBtr0113149 6178675 6179056 3L - 6178810 6178862 3'utr CG10274 FlyBase G34722.1 CAGGAGAACACAGAATACCTATGTGAATTCGACTTAAGTTTAATGATTCTGGT 26 6178835 0.971570844 4 24 144 0.942857143 1.041392685 0.171428571 0.269230769 0.457142857 26 0 2 33 3L:6178810-6178862 6 CG10274 FBtr0113149 6178675 6179056 AATTCG 6mer3-8 dme-miR-995-5p 3L - 6178821 6178861 3'utr CG10274 FlyBase G26257.2 AGGAGAACACAGAATACCTATGTGAATTCGACTTAAGTTTA 15 6178836 0.975184735 3 12 76 0.842105263 0.602059991 0.052631579 0.266666667 0.421052632 15 0 3 16 3L:6178821-6178861 6 16.5 1529 FBgn0035690 331.03 13.22333333 20.28333333 0.049844425 1.247794303 0.81347576 -2 -1 -1.5 0.25 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 6178851 6178857 + 3L_6178851_6178857_+ 0.612945551 0.661398466 0.637172009 0.034261374 CG7376 FBtr0331788 6178643 6178941 3L + 6178828 6178883 3'utr CG7376 FlyBase G28336.1 AAGTCGAATTCACATAGGTATTCTGTGTTCTCCTGAATAATGTACAGTATTATTTG 7 6178854 0.984311664 5 7 64 1 1.041392685 0.454545455 0.428571429 0.636363636 7 0 0 11 3L:6178828-6178883 7 CG7376 FBtr0331788 6178643 6178941 TGTGTTC 7mer-m8 dme-miR-317-3p 3L + 6178833 6178883 3'utr CG7376 FlyBase G21459.1 GAATTCACATAGGTATTCTGTGTTCTCCTGAATAATGTACAGTATTATTTG 7 6178848 0.990218748 6 7 68 1 1.041392685 0.363636364 0.428571429 0.636363636 7 0 0 11 3L:6178833-6178883 7 5.5 1530 FBgn0035689 292.97 8.566666667 13.15333333 0.018773253 0.642023346 0.418144957 -3 3 0 0.25 dme-miR-283-5p 6mer3-8 TGATAT 3L 6178942 6178947 - 3L_6178942_6178947_- 0.93121898 0.895289498 0.913254239 0.025405993 CG10274 FBtr0113149 6178675 6179056 3L - 6178930 6178971 3'utr CG10274 FlyBase G34724.1 AGAACAGTGTGTGTAAGATGGATATGATATAGTTTTAAGCTG 9 6178952 0.885437843 4 8 76 1 1.176091259 0.4 0.222222222 0.533333333 9 0 0 15 3L:6178930-6178971 6 CG10274 FBtr0113149 6178675 6179056 TGATAT 6mer3-8 dme-miR-283-5p 3L - 6178927 6178966 3'utr CG10274 FlyBase G26258.1 AGTGTGTGTAAGATGGATATGATATAGTTTTAAGCTGAAA 10 6178953 0.880486114 5 9 81 1 1.176091259 0.266666667 0.4 0.6 10 0 0 15 3L:6178927-6178966 6 8.5 1531 FBgn0035690 331.03 13.22333333 20.28333333 0.025677431 0.642803126 0.41906327 5 6 5.5 0.25 dme-bantam-3p 6mer3-8 TGATCT 3L 6182276 6182281 - 3L_6182276_6182281_- 0.999566601 0.999103804 0.999335202 0.000327249 D19B FBtr0077017 6182174 6182416 3L - 6182243 6182307 3'utr D19B FlyBase G34732.1 CAACTAGTTTTCGTCACTTTGCAATTTGATCTTTTTTGTATTTAAATCCCCCCTTTAAACTGCTT 55 6182282 0.791990291 12 53 692 0.96969697 1.806179974 0.121212121 0.181818182 0.318181818 55 2 0 64 3L:6182243-6182307 6 D19B FBtr0077017 6182174 6182416 TGATCT 6mer3-8 dme-bantam-3p 3L - 6182234 6182299 3'utr D19B FlyBase G26262.1 TTTCGTCACTTTGCAATTTGATCTTTTTTGTATTTAAATCCCCCCTTTAAACTGCTTAAGTTTGTA 39 6182282 0.988137582 9 36 452 0.942307692 1.69019608 0.019230769 0.282051282 0.461538462 39 3 0 49 3L:6182234-6182299 6 41 1532 FBgn0022699 264.21 11.84 18.04333333 0.155179592 3.462837838 2.272307408 1 1 1 0.25 dme-miR-33-5p 7mer-m8 CAATGCA 3L 6186303 6186309 - 3L_6186303_6186309_- 0.647200574 0.64192914 0.644564857 0.003727513 D19A FBtr0077016 6185828 6186380 3L - 6186221 6186409 stop_codon D19A FlyBase G34743.1 TGGATGCCCTGAAGATCGACCACGTCTAGGCAGCAGGATTGGCTTTACTTTACTAGCATATATGCATCATAACCTAGCCACATCCATATGTATCCACTTCCAATGCAGCTGACACTGTCCGGAAAAGTTGTAGGCATGCCTCGAATTGCTCTCTAGCTGGATCAGATTGTAGGTTTATAGGCACTCCAG 89 6186306 0.975116679 19 88 566 0.990566038 2.021189299 0.141509434 0.168539326 0.301886792 89 1 0 105 3L:6186221-6186409 7 D19A FBtr0077016 6185828 6186380 CAATGCA 7mer-m8 dme-miR-33-5p 3L - 6186220 6186322 3'utr D19A FlyBase G26267.1 ATGTATCCACTTCCAATGCAGCTGACACTGTCCGGAAAAGTTGTAGGCATGCCTCGAATTGCTCTCTAGCTGGATCAGATTGTAGGTTTATAGGCACTCCAGA 39 6186306 0.927633539 10 38 257 0.983606557 1.77815125 0.213114754 0.435897436 0.639344262 39 1 0 60 3L:6186220-6186322 7 29 1533 FBgn0022935 233.1233333 8.756666667 13.45 0.124397672 3.311762467 2.156133829 -3 -3 -3 0.25 dme-miR-970-3p 6mer2-7 CTTATG 3L 6192360 6192365 - 3L_6192360_6192365_- 0.869857763 0.869383495 0.869620629 0.000335381 CG13298 FBtr0077015 6192122 6192480 3L - 6192342 6192386 3'utr CG13298 FlyBase G34750.1 TTTAGGGAACTTCTTGCTCTGCTTATGTGTATACCAAATTTTTGC 17 6192364 0.973666618 5 16 148 1 1.301029996 0.1 0.176470588 0.3 17 0 0 20 3L:6192342-6192386 6 CG13298 FBtr0077015 6192122 6192480 CTTATG 6mer2-7 dme-miR-970-3p 3L - 6192347 6192387 3'utr CG13298 FlyBase G26271.1 GTTTAGGGAACTTCTTGCTCTGCTTATGTGTATACCAAATT 11 6192364 0.596580178 6 11 102 1 1.230448921 0.058823529 0.272727273 0.529411765 11 0 0 17 3L:6192347-6192387 6 13 1534 FBgn0035692 547.6666667 75.45333333 115.9233333 0.023737066 0.172291924 0.112143083 -1 -1 -1 0.25 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 6198119 6198125 + 3L_6198119_6198125_+ 0.645646025 0.643748722 0.644697374 0.001341594 Trn FBtr0077001|FBtr0333059|FBtr0077002|FBtr0077000 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 3L + 6198007 6198175 3'utr Trn FlyBase G28355.1 AAGCTAGAGGATCTTTGATCTGTAGAACCTCTTTAGGCACACGACTGTCCGCTTACAGCATATAAAATGCCTTTCTTGTGCAGAAAACTTAGTAGGAACCACTAGAAAATTATGTGTTCCGGCCGTACTTAACCGGAGTCAGTGCTATAGCAGATATGCCCCATTCTCC 36 6198117 0.941499819 14 34 234 0.976190476 1.612783857 0.166666667 0.138888889 0.261904762 36 1 0 41 3L:6198007-6198175 7 Trn FBtr0077002|FBtr0077000|FBtr0077001|FBtr0333059 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 TGTGTTC 7mer-m8 dme-miR-317-3p 3L + 6198100 6198133 3'utr Trn FlyBase G21469.1 AGGAACCACTAGAAAATTATGTGTTCCGGCCGTA 7 6198116 0.781381192 2 7 40 1 0.954242509 0.555555556 0.285714286 0.444444444 7 0 0 9 3L:6198100-6198133 7 11.5 1535 FBgn0024921 2762.84 61.57666667 94.85333333 0.004162384 0.186759054 0.121239809 2 3 2.5 0.25 dme-miR-304-5p 8mer-A1 TGAGATTA 3L 6198831 6198838 + 3L_6198831_6198838_+ 0.595822216 0.491437346 0.543629781 0.073811271 Trn FBtr0077001|FBtr0333059|FBtr0077002|FBtr0077000 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 3L + 6198812 6198849 3'utr Trn FlyBase G28359.1 TAGGGAAACATTGTAAAATTGAGATTAGGATTTTGTTG 19 6198830 0.795807157 6 18 138 0.961538462 1.397940009 0.115384615 0.368421053 0.538461538 19 1 0 25 3L:6198812-6198849 8 Trn FBtr0077002|FBtr0077000|FBtr0077001|FBtr0333059 6197720|6197720|6197720|6197720 6199596|6200385|6199596|6200385 TGAGATTA 8mer-A1 dme-miR-304-5p 3L + 6198809 6198859 3'utr Trn FlyBase G21473.1 AAATAGGGAAACATTGTAAAATTGAGATTAGGATTTTGTTGAATATCTTAT 17 6198830 0.969663796 4 16 137 0.966666667 1.462397998 0.2 0.411764706 0.666666667 17 1 0 29 3L:6198809-6198859 8 18 1536 FBgn0024921 2762.84 61.57666667 94.85333333 0.006515035 0.292318519 0.189766657 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 651643 651649 - 3L_651643_651649_- 0.583668684 0.592050819 0.587859752 0.00592704 CG3402 FBtr0072559|FBtr0072559|FBtr0072559 651540|651540|651540 652087|652087|652087 3L - 651556 651697 3'utr CG3402 FlyBase G33073.1 AGCCGAACGCAGAGTTGTTGAAAGAAACATACATTCATAGTACATACTTGTGATAAATGACTTTAACTGTGCAGATATGTGCGAAGAAGGCGCATCACTTAAGTTTAAAATTGAGTTTTTAATGTTATATTGCATTTGAATA 219 651650 0.984923939 18 198 1606 0.896296296 1.383815366 0.103703704 0.168949772 0.325925926 219 19 9 242 3L:651556-651697 7 CG3402 FBtr0072559|FBtr0072559|FBtr0072559 651540|651540|651540 652087|652087|652087 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 651593 651675 3'utr CG3402 FlyBase G25015.1 AGAAACATACATTCATAGTACATACTTGTGATAAATGACTTTAACTGTGCAGATATGTGCGAAGAAGGCGCATCACTTAAGTT 158 651650 0.879725045 11 140 1146 0.87398374 1.101989539 0.166666667 0.411392405 0.62195122 158 15 16 215 3L:651593-651675 7 176 1537 FBgn0035148 1763.92 212.3 323.94 0.099777768 0.829015544 0.54331049 1 1 1 0.25 dme-miR-986-5p 7mer-m8 ATTCGAG 3L 657921 657927 + 3L_657921_657927_+ 0.585704633 0.579350276 0.582527455 0.004493169 Rev1 FBtr0072557 657793 657971 3L + 657848 657957 3'utr Rev1 FlyBase G26877.1 TAATGTAACGCCAAGCTATGAATGCGGCCAGCTGATAATGTTAATGAGCCATTAGTTTATAAGCCATCCATTAATTCGAGCCAAAAATAAAACATTCTGGTAAAGAAAAT 60 657921 0.982377421 15 47 355 0.763157895 1.161368002 0.065789474 0.166666667 0.342105263 60 15 3 58 3L:657848-657957 7 Rev1 FBtr0072557 657793 657971 ATTCGAG 7mer-m8 dme-miR-986-5p 3L + 657841 657938 3'utr Rev1 FlyBase G20338.1 ATTATAATAATGTAACGCCAAGCTATGAATGCGGCCAGCTGATAATGTTAATGAGCCATTAGTTTATAAGCCATCCATTAATTCGAGCCAAAAATAAA 42 657920 0.980466558 13 34 240 0.828125 1.72427587 0.078125 0.380952381 0.59375 42 11 0 53 3L:657841-657938 7 23.5 1538 FBgn0035150 1798.706667 67.56666667 104.0266667 0.013064943 0.347804637 0.225903614 0 1 0.5 0.25 dme-miR-34-5p 6mer3-8 CACTGC 3L 6689797 6689802 - 3L_6689797_6689802_- 0.973385703 0.830650738 0.902018221 0.100928886 SP1173 FBtr0076960|FBtr0076959|FBtr0076961|FBtr0076958 6689697|6689325|6689325|6689325 6689965|6689965|6689965|6689965 3L - 6689780 6689812 3'utr SP1173 FlyBase G34844.1 TTGAGGGCAACACTGCTAATAGTTTGTAATGCG 6 6689796 0.797776776 2 6 37 1 0.903089987 0 0.333333333 0.5 6 0 0 8 3L:6689780-6689812 6 SP1173 FBtr0076961|FBtr0076958|FBtr0076960|FBtr0076959 6689325|6689325|6689697|6689325 6689965|6689965|6689965|6689965 CACTGC 6mer3-8 dme-miR-34-5p 3L - 6689714 6689811 3'utr SP1173 FlyBase G26364.1 TGAGGGCAACACTGCTAATAGTTTGTAATGCGTATTTTTGCTAAGTGTATACACCAGGAGGATGAAAAGCAAAGGAGTGGAGACGATTAAAACAAAAA 9 6689796 0.980786037 7 9 66 1 1.113943352 0.307692308 0.333333333 0.538461538 9 0 0 13 3L:6689714-6689811 6 4.5 1539 FBgn0035710 0.666666667 0.03 0.043333333 6.75 150 103.8461538 -6 -6 -6 0.25 dme-miR-283-5p 7mer-m8 TGATATT 3L 6689873 6689879 - 3L_6689873_6689879_- 0.539256649 0.581062726 0.560159687 0.029561377 SP1173 FBtr0076960|FBtr0076959|FBtr0076961|FBtr0076958 6689697|6689325|6689325|6689325 6689965|6689965|6689965|6689965 3L - 6689828 6689892 3'utr SP1173 FlyBase G34845.1 AATCGAGTGCGAATGATATTCTTAGTTTTTAAATGTGTACACCACGCCTCGTCCTCCTCCACCTA 17 6689871 0.988633972 7 16 151 1 1.230448921 0.352941176 0 0 17 0 0 17 3L:6689828-6689892 7 SP1173 FBtr0076961|FBtr0076958|FBtr0076960|FBtr0076959 6689325|6689325|6689697|6689325 6689965|6689965|6689965|6689965 TGATATT 7mer-m8 dme-miR-283-5p 3L - 6689853 6689894 3'utr SP1173 FlyBase G26365.1 CAAATCGAGTGCGAATGATATTCTTAGTTTTTAAATGTGTAC 12 6689871 0.724554945 4 11 130 0.928571429 0.812913357 0.642857143 0.166666667 0.285714286 12 0 1 13 3L:6689853-6689894 7 12 1540 FBgn0035710 0.666666667 0.03 0.043333333 18 400 276.9230769 -8 -8 -8 0.25 dme-bantam-3p 7mer-A1 GATCTCA 3L 6739185 6739191 - 3L_6739185_6739191_- 0.578068818 0.821465404 0.699767111 0.172107386 dikar FBtr0303751 6738526 6740644 3L - 6739164 6739201 5'utr dikar FlyBase G34866.1 AAGTATTGCCGATCTCAGTCTGCCCTCGCCGGTGGCAC 15 6739183 0.721318932 4 15 101 1 1.230448921 0.176470588 0.133333333 0.235294118 15 0 0 17 3L:6739164-6739201 7 dikar FBtr0303751 6738526 6740644 GATCTCA 7mer-A1 dme-bantam-3p 3L - 6739164 6739201 5'utr dikar FlyBase G26378.1 AAGTATTGCCGATCTCAGTCTGCCCTCGCCGGTGGCAC 8 6739182 0.656678179 6 8 55 1 1.041392685 0.090909091 0.25 0.454545455 8 0 0 11 3L:6739164-6739201 7 11.5 1541 FBgn0261934 1905.406667 25.77666667 39.66 0.006035457 0.44613992 0.2899647 -8 -9 -8.5 0.25 dme-miR-965-3p 7mer-m8 TACGCTT 3L 6950083 6950089 - 3L_6950083_6950089_- 0.609510025 0.588710967 0.599110496 0.014707114 CG10077 FBtr0333083|FBtr0076940 6949489|6949489 6950329|6950329 3L - 6950037 6950178 3'utr CG10077 FlyBase G34895.1 ATGTTAGATGAGCGTCGGTGATGTACGTATCGTGTAGATCTCCTCCGCCCACATCATAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTTTTAATTTGATTAATCTCTTTGTTCCCCCCAAAACAAAACAAAACAA 460 6950061 0.982828116 29 428 3238 0.937172775 1.729974286 0.188481675 0.2 0.357766143 460 27 9 537 3L:6950037-6950178 7 CG10077 FBtr0076940|FBtr0333083 6949489|6949489 6950329|6950329 TACGCTT 7mer-m8 dme-miR-965-3p 3L - 6950039 6950186 3'utr CG10077 FlyBase G26404.1 GAGGGAAGATGTTAGATGAGCGTCGGTGATGTACGTATCGTGTAGATCTCCTCCGCCCACATCATAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTTTTAATTTGATTAATCTCTTTGTTCCCCCCAAAACAAAACAAAAC 374 6950061 0.979506461 28 359 2482 0.956603774 1.75076545 0.186792453 0.312834225 0.51509434 374 15 8 507 3L:6950039-6950186 7 143 1542 FBgn0035720 1853.276667 63.62 96.59333333 0.077160633 2.247720843 1.480433432 -28 -28 -28 0.25 dme-miR-282-5p 8mer-A1 AGAGGCTA 3L 6950305 6950312 - 3L_6950305_6950312_- 0.504218364 0.504499944 0.504359154 0.000199051 CG10077 FBtr0333083|FBtr0076940 6949489|6949489 6950329|6950329 3L - 6950218 6950409 stop_codon CG10077 FlyBase G34896.1 CGCAGGCGGCACCCTATATGATGGCGAACGGCGGCGACATCTTTGCCTATCCGCCGCCTCCGCTGCCTGTGCAGAACTAGAGGCCCTGCGGTTCGATAGAGGCTACCAGATTGTAGACCAGCTCTACTGTAATTTCCTTTCCCCACACGAACATTACACGCACATCCGCACACCCACCCGTATTAATTGTAC 403 6950313 0.958740188 22 396 1912 0.985355649 2.673020907 0.40167364 0.153846154 0.286610879 403 7 0 471 3L:6950218-6950409 8 CG10077 FBtr0076940|FBtr0333083 6949489|6949489 6950329|6950329 AGAGGCTA 8mer-A1 dme-miR-282-5p 3L - 6950242 6950335 stop_codon CG10077 FlyBase G26405.1 AACTAGAGGCCCTGCGGTTCGATAGAGGCTACCAGATTGTAGACCAGCTCTACTGTAATTTCCTTTCCCCACACGAACATTACACGCACATCCG 202 6950313 0.889044747 12 196 983 0.98125 2.195899652 0.384375 0.405940594 0.625 202 5 1 314 3L:6950242-6950335 8 280.5 1543 FBgn0035720 1853.276667 63.62 96.59333333 0.151353549 4.408990883 2.903927117 1 1 1 0.25 dme-miR-1012-3p 6mer3-8 TTGACT 3L 6952578 6952583 - 3L_6952578_6952583_- 0.978741096 0.677642605 0.828191851 0.212908791 CG10077 FBtr0300937 6951802 6953758 3L - 6952571 6952614 3'utr CG10077 FlyBase G34901.1 CATTTGCAACATTTTGCGGCCCAAGTATTTGTTGACTGATGATA 9 6952585 0.634934761 8 9 71 1 1 0 0.111111111 0.2 9 0 0 10 3L:6952571-6952614 6 CG10077 FBtr0300937 6951802 6953758 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 6952544 6952610 3'utr CG10077 FlyBase G26411.1 TGCAACATTTTGCGGCCCAAGTATTTGTTGACTGATGATAATTTTCTGTAGCTTATTTATGTATCAT 7 6952574 0.978764941 6 7 56 1 1 0.2 0.285714286 0.5 7 0 0 10 3L:6952544-6952610 6 3.5 1544 FBgn0035720 1853.276667 63.62 96.59333333 0.001888547 0.055014146 0.036234385 2 -9 -3.5 0.25 dme-miR-31a-5p 6mer3-8 TCTTGC 3L 6952884 6952889 - 3L_6952884_6952889_- 0.562275408 0.967102363 0.764688885 0.286255917 CG10077 FBtr0300937 6951802 6953758 3L - 6952775 6952963 3'utr CG10077 FlyBase G34903.1 AATGAGGGGAATGTGTTTGTTCTCCATGCATTGCTGGTTATATGATGTTGTTACTTTTAGTTCGTTTGTTGCTCTCTTGCTCATAGTTTTTAGTTGTGTCTCGTCAATCACATTTTGAGTAACTTAATTGTAAAAAAGCGATTTACTGTCAGTCAAGGAGTCAATGGCCAGCAAAATAATCTTAAAACA 29 6952886 0.992061641 17 25 293 0.9 1.431363764 0.066666667 0.034482759 0.066666667 29 3 0 27 3L:6952775-6952963 6 CG10077 FBtr0300937 6951802 6953758 TCTTGC 6mer3-8 dme-miR-31a-5p 3L - 6952839 6952926 3'utr CG10077 FlyBase G26412.1 TTATATGATGTTGTTACTTTTAGTTCGTTTGTTGCTCTCTTGCTCATAGTTTTTAGTTGTGTCTCGTCAATCACATTTTGAGTAACTT 11 6952886 0.992110176 8 11 120 1 1.146128036 0.071428571 0.181818182 0.357142857 11 0 0 14 3L:6952839-6952926 6 9 1545 FBgn0035720 1853.276667 63.62 96.59333333 0.004856264 0.141464948 0.093174132 -3 -3 -3 0.25 dme-miR-8-3p 7mer-m8 CAGTATT 3L 6960126 6960132 - 3L_6960126_6960132_- 0.660503931 0.655590935 0.658047433 0.003474016 sgl FBtr0076938 6959552 6960185 3L - 6959923 6960238 stop_codon sgl FlyBase G34914.2 AGTACCAGCGCACCGGACTGCTCCGCTCGTGGGGCATTGTGCCGCAGCTTTAGGCGCGTCGGGCGGCGGAGGTGGTGGCATTTACACTTAAAGTTGGCGAAATTTCCAGTATTTGCGAGACTAAACTGTAAATATCCGTATTCTTTTCTGTAGCTGAGTGTATGTTAGATTGGGTCGATTAAGCTTAAGTTGAATCATGTTTAGGAGAATAGAATCGTTTCAAATCATCAGAGGACTCTGTCAGTTTTAAGTGAAAAGTAAAGTTGAATTCTTGCATTTTGTATATTAGTTTCTAAAGGATATAAGCTTTTAAAAC 273 6960157 0.987713674 41 257 2333 0.941558442 1.860338007 0.217532468 0.10989011 0.211038961 273 15 3 290 3L:6959923-6960238 7 sgl FBtr0076938 6959552 6960185 CAGTATT 7mer-m8 dme-miR-8-3p 3L - 6960047 6960247 stop_codon sgl FlyBase G26419.1 TCGGCAAGAAGTACCAGCGCACCGGACTGCTCCGCTCGTGGGGCATTGTGCCGCAGCTTTAGGCGCGTCGGGCGGCGGAGGTGGTGGCATTTACACTTAAAGTTGGCGAAATTTCCAGTATTTGCGAGACTAAACTGTAAATATCCGTATTCTTTTCTGTAGCTGAGTGTATGTTAGATTGGGTCGATTAAGCTTAAGTTG 155 6960157 0.986679355 32 146 1262 0.948356808 1.828230115 0.234741784 0.309677419 0.497652582 155 9 2 202 3L:6960047-6960247 7 65 1546 FBgn0261445 3785.826667 203.07 312.6666667 0.017169302 0.32008667 0.207889126 25 25 25 0.25 dme-miR-8-3p 7mer-A1 AGTATTA 3L 6973292 6973298 - 3L_6973292_6973298_- 0.76077092 0.823349097 0.792060009 0.04424947 Galphai FBtr0076934 6972748 6973342 3L - 6973232 6973460 stop_codon Galphai FlyBase G34930.2 AAAGGAGATATACACGCATCTCACCTGCGCCACGGATACGAACAACGTGAAGTTCGTCTTCGATGCCGTCACCGATGTGATCATCAAGAACAATCTGAAACAAATTGGCTTATTCTGAGAGGGCGGCGGAGCACAAGATCATCATTATTTAGCTGGCGTCGTAGTATTAAAGGAAAACGCGCATAAACATTTCCATTAAACGCTAAGAACTCGATACATTTACGCTCGT 78 6973312 0.878313935 29 70 453 0.909090909 1.602059991 0.147727273 0.128205128 0.227272727 78 7 1 80 3L:6973232-6973460 7 Galphai FBtr0076934 6972748 6973342 AGTATTA 7mer-A1 dme-miR-8-3p 3L - 6973286 6973461 stop_codon Galphai FlyBase G26431.1 AAAAGGAGATATACACGCATCTCACCTGCGCCACGGATACGAACAACGTGAAGTTCGTCTTCGATGCCGTCACCGATGTGATCATCAAGAACAATCTGAAACAAATTGGCTTATTCTGAGAGGGCGGCGGAGCACAAGATCATCATTATTTAGCTGGCGTCGTAGTATTAAAGGAA 48 6973301 0.964731954 19 40 282 0.835616438 1.183269844 0.164383562 0.333333333 0.561643836 48 9 3 61 3L:6973286-6973461 7 16.5 1547 FBgn0001104 5741.72 340.2133333 523.18 0.002873703 0.048498981 0.031537903 14 3 8.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 7123385 7123390 - 3L_7123385_7123390_- 0.730949349 0.730936517 0.730942933 9.05E-06 msl-3 FBtr0076926|FBtr0076926|FBtr0076926 7123211|7123211|7123211 7123532|7123532|7123532 3L - 7123373 7123404 3'utr msl-3 FlyBase G34937.1 AAAAAGTTTCCTAATGTGATCGTATAATCGAA 10 7123397 0.658593152 5 10 81 1 1.146128036 0.071428571 0.3 0.5 10 0 0 14 3L:7123373-7123404 6 msl-3 FBtr0076926|FBtr0076926|FBtr0076926 7123211|7123211|7123211 7123532|7123532|7123532 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 7123362 7123405 3'utr msl-3 FlyBase G26438.1 AAAAAAGTTTCCTAATGTGATCGTATAATCGAATAATGCCTATA 5 7123395 0.989834517 3 4 43 0.833333333 0.698970004 0 0.2 0.333333333 5 1 0 5 3L:7123362-7123405 6 7.5 1548 FBgn0002775 342.2933333 21.25 32.62333333 0.021911031 0.352941176 0.229896802 7 5 6 0.25 dme-miR-252-5p 7mer-m8 GTACTTA 3L 7333319 7333325 + 3L_7333319_7333325_+ 0.565799235 0.576365196 0.571082216 0.00747129 CG42307 FBtr0299691|FBtr0344452|FBtr0299692 7329590|7329590|7329590 7333471|7333471|7333471 3L + 7333296 7333383 3'utr CG42307 FlyBase G28431.1 TCTACAAGTTATGGAATTTCATTGTACTTATACCTAACTTTGAATGCATTGAATTATTTTCTAGTATTTACCTTATATTGTATTATTG 15 7333318 0.809788193 7 13 157 0.875 1.146128036 0.25 0.066666667 0.125 15 2 0 14 3L:7333296-7333383 7 CG42307 FBtr0299692|FBtr0344452|FBtr0299691 7329590|7329590|7329590 7333471|7333471|7333471 GTACTTA 7mer-m8 dme-miR-252-5p 3L + 7333306 7333365 3'utr CG42307 FlyBase G21516.1 ATGGAATTTCATTGTACTTATACCTAACTTTGAATGCATTGAATTATTTTCTAGTATTTA 12 7333318 0.991224745 4 10 108 0.888888889 1.204119983 0.055555556 0.416666667 0.611111111 12 2 0 16 3L:7333306-7333365 7 9 1549 FBgn0259203 453.5333333 57.31 87.29333333 0.019844186 0.157040656 0.103100657 1 1 1 0.25 dme-miR-184-3p 7mer-A1 CCGTCCA 3L 7333767 7333773 - 3L_7333767_7333773_- 0.706819113 0.711383588 0.709101351 0.003227589 CG43780 FBtr0331507|FBtr0331508 7333542|7333542 7334274|7334274 3L - 7333577 7333929 3'utr CG43780 FlyBase G34984.1 AAGAGCCCACTAACCCGTCTGCACCCACCAACCATATCAGTTTTGCATGCAGTACAAATAGTTTCATTAGCAACCAGTTTTGTTCGAGCCGATTCCATTCCATTAATCGCAATCTGACAATGTGCCTTTCACGTAGAGACTCGTAAGAAATTTATACCGTCCAAGTGTCTTTTCTAGCGCCGTAAGATCGAATTGTATTTTTACATTTAATACCCATTTAGGGTAGTCTGTCTACAGATGCTGCATTTAATGTTGTCCAATATTCTACTCGTATGAAAATATCAGTGTCTTGTATCTACTACAAACTCTATACATTTGTATTCGTCCATTAGTTTTGTAATATTGTATTTTGA 1024 7333775 0.879387613 70 996 7404 0.97492163 2.140577871 0.123040752 0.1875 0.347962382 1024 24 8 1244 3L:7333577-7333929 7 CG43780 FBtr0331508|FBtr0331507 7333542|7333542 7334274|7334274 CCGTCCA 7mer-A1 dme-miR-184-3p 3L - 7333662 7333927 3'utr CG43780 FlyBase G26467.3 GAGCCCACTAACCCGTCTGCACCCACCAACCATATCAGTTTTGCATGCAGTACAAATAGTTTCATTAGCAACCAGTTTTGTTCGAGCCGATTCCATTCCATTAATCGCAATCTGACAATGTGCCTTTCACGTAGAGACTCGTAAGAAATTTATACCGTCCAAGTGTCTTTTCTAGCGCCGTAAGATCGAATTGTATTTTTACATTTAATACCCATTTAGGGTAGTCTGTCTACAGATGCTGCATTTAATGTTGTCCAATATTCTAC 825 7333775 0.876668664 50 799 5386 0.967585089 2.298853076 0.132090762 0.349090909 0.564829822 825 35 5 1194 3L:7333662-7333927 7 589.5 1550 FBgn0264302 77.98333333 6.63 10.06333333 7.559307544 88.91402715 58.57899967 2 2 2 0.25 dme-miR-34-5p 6mer2-7 ACTGCC 3L 7341923 7341928 - 3L_7341923_7341928_- 0.65734787 0.619448451 0.638398161 0.026798923 CG8596 FBtr0332733|FBtr0332732|FBtr0076881 7341882|7341882|7341882 7341977|7341977|7341977 3L - 7341902 7341941 3'utr CG8596 FlyBase G35011.1 ACATCGTTGCAATACTGCCCCTTAAACTAGCTTTAAAATA 11 7341928 0.744206599 5 10 71 0.928571429 1.113943352 0.071428571 0.181818182 0.357142857 11 1 0 13 3L:7341902-7341941 6 CG8596 FBtr0332732|FBtr0076881|FBtr0332733 7341882|7341882|7341882 7341977|7341977|7341977 ACTGCC 6mer2-7 dme-miR-34-5p 3L - 7341903 7341945 3'utr CG8596 FlyBase G26489.1 AGACACATCGTTGCAATACTGCCCCTTAAACTAGCTTTAAAAT 9 7341929 0.759191739 6 9 57 1 1.041392685 0 0.222222222 0.363636364 9 0 0 11 3L:7341903-7341945 6 9.5 1551 FBgn0035767 191.44 11.73333333 17.72 0.049623903 0.809659091 0.536117381 0 1 0.5 0.25 dme-miR-304-5p 7mer-m8 TGAGATT 3L 7352547 7352553 + 3L_7352547_7352553_+ 0.620193152 0.620200551 0.620196852 5.23E-06 qm FBtr0332729|FBtr0076846|FBtr0302045 7352392|7352392|7352392 7353622|7353622|7353622 3L + 7352526 7352567 5'utr qm FlyBase G28446.1 CTGCAGAAGCTGAAGATATTCTGAGATTTATGTTACCCTTTG 19 7352544 0.706644077 5 16 162 0.954545455 1.322219295 0.181818182 0.157894737 0.272727273 19 1 0 21 3L:7352526-7352567 7 qm FBtr0076846|FBtr0302045|FBtr0332729 7352392|7352392|7352392 7353622|7353622|7353622 TGAGATT 7mer-m8 dme-miR-304-5p 3L + 7352530 7352562 5'utr qm FlyBase G21526.1 AGAAGCTGAAGATATTCTGAGATTTATGTTACC 9 7352544 0.578140011 6 9 72 1 1.079181246 0 0.333333333 0.5 9 0 0 12 3L:7352530-7352562 7 12.5 1552 FBgn0019662 681.67 36.89 56.62 0.018337319 0.338845216 0.220770046 3 3 3 0.25 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 7372650 7372655 + 3L_7372650_7372655_+ 0.865129435 0.843456018 0.854292726 0.015325408 akirin FBtr0076849|FBtr0302545|FBtr0076848|FBtr0302543|FBtr0332730|FBtr0302544 7372590|7372590|7372590|7372590|7372590|7372590 7373711|7372783|7372783|7373711|7373711|7373711 3L + 7372615 7372704 3'utr akirin FlyBase G28467.1 CAGAAAGAAGAAATTAATAATTGCACTACGATCTTATGTGACGGTAGATCTACCGCGACAACAACAGCCCTCATAAACTATAACAAACAA 319 7372651 0.824285241 14 305 2285 0.960835509 2.565847819 0.274151436 0.169278997 0.308093995 319 15 0 368 3L:7372615-7372704 6 akirin FBtr0332730|FBtr0302544|FBtr0076848|FBtr0302543|FBtr0076849|FBtr0302545 7372590|7372590|7372590|7372590|7372590|7372590 7373711|7373711|7372783|7373711|7373711|7372783 ATGTGA 6mer3-8 dme-miR-1003-3p 3L + 7372620 7372709 3'utr akirin FlyBase G21547.1 AGAAGAAATTAATAATTGCACTACGATCTTATGTGACGGTAGATCTACCGCGACAACAACAGCCCTCATAAACTATAACAAACAACAAAT 242 7372651 0.960643368 14 229 1656 0.949602122 2.076761772 0.265251989 0.396694215 0.612732095 242 17 2 358 3L:7372620-7372709 6 266 1553 FBgn0082598 6331.316667 435.1366667 666.7366667 0.042013378 0.611302196 0.398958109 -1 -1 -1 0.25 dme-miR-965-3p 7mer-m8 TACGCTT 3L 7373545 7373551 + 3L_7373545_7373551_+ 0.50335617 0.43283933 0.46809775 0.049862978 akirin FBtr0076849|FBtr0302543|FBtr0332730|FBtr0302544 7372590|7372590|7372590|7372590 7373711|7373711|7373711|7373711 3L + 7373517 7373587 3'utr akirin FlyBase G28471.1 AAGTTAAATTGAACGCTTTCTTATAAAATACGCTTGACAGAAGATGTTTCATGTTCATTGCAATTATTTTT 121 7373545 0.984754637 13 115 903 0.958041958 1.835690571 0.244755245 0.157024793 0.286713287 121 5 1 137 3L:7373517-7373587 7 akirin FBtr0332730|FBtr0302544|FBtr0302543|FBtr0076849 7372590|7372590|7372590|7372590 7373711|7373711|7373711|7373711 TACGCTT 7mer-m8 dme-miR-965-3p 3L + 7373500 7373572 3'utr akirin FlyBase G21551.1 TATAAAAGTTATTCATTAAGTTAAATTGAACGCTTTCTTATAAAATACGCTTGACAGAAGATGTTTCATGTTC 70 7373545 0.981879236 9 68 504 0.968421053 1.963787827 0.210526316 0.285714286 0.473684211 70 3 0 92 3L:7373500-7373572 7 78 1554 FBgn0082598 6331.316667 435.1366667 666.7366667 0.012319712 0.179254027 0.116987716 0 0 0 0.25 dme-miR-283-5p 8mer-m1 TGATATTT 3L 7374497 7374504 - 3L_7374497_7374504_- 0.555511411 0.555485609 0.55549851 1.82E-05 SMSr FBtr0076870 7374048 7374593 3L - 7374434 7374536 3'utr SMSr FlyBase G35059.1 AAAGCAAACATGCAGAAACTAACCATACCGACTGATATTTTTATTTCGAAATTTCCATCGATCCCCTTCCTTTCACAGCTCTCCCCTGTATTATTGACAGCAT 85 7374501 0.74484519 15 78 602 0.923913043 1.452297671 0.141304348 0.070588235 0.141304348 85 5 2 85 3L:7374434-7374536 8 SMSr FBtr0076870 7374048 7374593 TGATATTT 8mer-m1 dme-miR-283-5p 3L - 7374487 7374548 3'utr SMSr FlyBase G26530.2 GTCGCTCTTCGAAAAGCAAACATGCAGAAACTAACCATACCGACTGATATTTTTATTTCGAA 40 7374511 0.976968592 5 36 228 0.964285714 1.73239376 0.071428571 0.375 0.553571429 40 2 0 54 3L:7374487-7374548 8 49.5 1555 FBgn0052380 477.4766667 22.27333333 34.04333333 0.103669987 2.222388506 1.454029178 -3 7 2 0.25 dme-miR-283-5p 8mer-m1 TGATATTT 3L 7432789 7432796 - 3L_7432789_7432796_- 0.555453584 0.5395691 0.547511342 0.011232038 Rac2 FBtr0332800 7432760 7433931 3L - 7432731 7432813 3'utr Rac2 FlyBase G35065.1 GATGTTAATTTATATACTGATATTTATGTTAAATAAATGCATACATTTTGCCAATTTGTTTTAACGAAAGAGAGCGAGCGGTA 18 7432800 0.990313268 12 18 182 1 1.322219295 0.285714286 0.166666667 0.285714286 18 0 0 21 3L:7432731-7432813 8 Rac2 FBtr0332800 7432760 7433931 TGATATTT 8mer-m1 dme-miR-283-5p 3L - 7432770 7432807 3'utr Rac2 FlyBase G26533.1 AATTTATATACTGATATTTATGTTAAATAAATGCATAC 8 7432799 0.947867172 4 8 76 1 1.204119983 0.0625 0.625 0.8125 8 0 0 16 3L:7432770-7432807 8 10.5 1556 FBgn0014011 1633.203333 85.34333333 130.3833333 0.006429083 0.123032457 0.080531765 4 3 3.5 0.25 dme-miR-7-5p 7mer-m8 GTCTTCC 3L 7432877 7432883 - 3L_7432877_7432883_- 0.631668778 0.608564945 0.620116862 0.016336924 Rac2 FBtr0332800 7432760 7433931 3L - 7432867 7432916 3'utr Rac2 FlyBase G35067.1 CGTGTGAATGTGTGTGTGTGTGTCTGATCAATGGTCTTCCCGCTCAACGC 26 7432885 0.844410001 3 23 227 0.9 1.130333768 0.733333333 0.153846154 0.266666667 26 2 1 27 3L:7432867-7432916 7 Rac2 FBtr0332800 7432760 7433931 GTCTTCC 7mer-m8 dme-miR-7-5p 3L - 7432817 7432997 3'utr Rac2 FlyBase G26534.1 TGGCCAATATCTGAACAATCGGGGAATGTGGGAAGCCGACAAAAAAAGAACTTTCATTTATACATATAGTATTTAGAGTTACGTGTGAATGTGTGTGTGTGTGTCTGATCAATGGTCTTCCCGCTCAACGCATTTGCCTGGACTTGATTTAATGTATACTAAATGCACAATTAGCCTCTAC 50 7432885 0.980889737 16 49 348 0.986486486 1.86332286 0.378378378 0.32 0.540540541 50 1 0 73 3L:7432817-7432997 7 21.5 1557 FBgn0014011 1633.203333 85.34333333 130.3833333 0.013164313 0.251923603 0.164898377 2 2 2 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-m8 CTGTGAT 3L 753253 753259 + 3L_753253_753259_+ 0.608683895 0.598237548 0.603460721 0.00738672 emc FBtr0072578|FBtr0072578|FBtr0072578 752306|752306|752306 753492|753492|753492 3L + 753227 753288 3'utr emc FlyBase G26889.1 CCTATAAATATATATTAATATATGTTCTGTGATCTGTAGCATACTTTGTACAAAGTGTTTTT 1016 753260 0.66567851 18 959 10456 0.947533281 1.827512865 0.247454973 0.203740157 0.366483947 1016 50 17 1210 3L:753227-753288 7 emc FBtr0072578|FBtr0072578|FBtr0072578 752306|752306|752306 753492|753492|753492 CTGTGAT 7mer-m8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 753224 753287 3'utr emc FlyBase G20350.1 AAACCTATAAATATATATTAATATATGTTCTGTGATCTGTAGCATACTTTGTACAAAGTGTTTT 771 753261 0.715575089 17 727 7850 0.942783945 1.812520152 0.222886422 0.367055772 0.583262169 771 51 16 1104 3L:753224-753287 7 863 1558 FBgn0000575 1770.966667 105.6933333 162.6966667 0.487304485 8.165131828 5.304349608 -7 -8 -7.5 0.25 dme-miR-2a-2-5p 6mer3-8 TGATGA 3L 753408 753413 + 3L_753408_753413_+ 0.999567244 0.766780112 0.883173678 0.164605337 emc FBtr0072578 752306 753492 3L + 753398 753427 3'utr emc FlyBase G26891.1 AGAAAACATTTGATGATGTTGCGAAAAAAT 6 753411 0.793961073 3 6 38 1 0.954242509 0.333333333 0.333333333 0.555555556 6 0 0 9 3L:753398-753427 6 emc FBtr0072578 752306 753492 TGATGA 6mer3-8 dme-miR-2a-2-5p 3L + 753396 753422 3'utr emc FlyBase G20352.1 AAAGAAAACATTTGATGATGTTGCGAA 5 753413 0.854041908 2 4 24 1 0.84509804 0.142857143 0.4 0.571428571 5 0 0 7 3L:753396-753422 6 5 1559 FBgn0000575 1770.966667 105.6933333 162.6966667 0.002823317 0.047306673 0.030732037 -3 -5 -4 0.25 dme-miR-11-3p 7mer-m1 TGTGATG 3L 7537261 7537267 + 3L_7537261_7537267_+ 0.34571752 0.211332946 0.278525233 0.095024262 lqf FBtr0112941|FBtr0331834|FBtr0076795|FBtr0331836|FBtr0076796|FBtr0331833|FBtr0076798|FBtr0331838|FBtr0076794|FBtr0076797|FBtr0331837|FBtr0331835 7537034|7537034|7537034|7537034|7537034|7536739|7537034|7536739|7537034|7537034|7537034|7536739 7538279|7540012|7538279|7538279|7538279|7538279|7538279|7538279|7538279|7538279|7538279|7538279 3L + 7537245 7537302 3'utr lqf FlyBase G28521.3 ATTAAAGTGTAAAATATGTGATGTATGTGAGAGAGAAAGCCAAGATCCAGCGAAATAG 92 7537266 0.661098168 11 82 532 0.886792453 1.672097858 0.367924528 0.141304348 0.254716981 92 11 1 94 3L:7537245-7537302 7 lqf FBtr0076794|FBtr0076797|FBtr0331837|FBtr0331835|FBtr0076798|FBtr0331838|FBtr0076795|FBtr0076796|FBtr0331836|FBtr0112941|FBtr0331834|FBtr0331833 7537034|7537034|7537034|7536739|7537034|7536739|7537034|7537034|7537034|7537034|7537034|7536739 7538279|7538279|7538279|7538279|7538279|7538279|7538279|7538279|7538279|7538279|7540012|7538279 TGTGATG 7mer-m1 dme-miR-11-3p 3L + 7537228 7537303 3'utr lqf FlyBase G21581.2 ATGTGTAAGGAAGTATTATTAAAGTGTAAAATATGTGATGTATGTGAGAGAGAAAGCCAAGATCCAGCGAAATAGA 62 7537266 0.978327358 8 56 388 0.901098901 1.913813852 0.417582418 0.403225806 0.593406593 62 9 0 82 3L:7537228-7537303 7 63.5 1560 FBgn0028582 1900.05 62.33333333 95.30333333 0.033420173 1.018716578 0.666293589 -5 -5 -5 0.25 dme-miR-965-3p 6mer3-8 TACGCT 3L 7777471 7777476 - 3L_7777471_7777476_- 0.854924521 0.796071995 0.825498258 0.041615002 CG32369 FBtr0304992 7777103 7778469 3L - 7777455 7777499 3'utr CG32369 FlyBase G35102.1 ATGAACCTATATATAAAGTGCTATACGCTAAATGCTTATTTCTGT 25 7777476 0.837950856 4 25 169 1 1.491361694 0 0.16 0.322580645 25 0 0 31 3L:7777455-7777499 6 CG32369 FBtr0304992 7777103 7778469 TACGCT 6mer3-8 dme-miR-965-3p 3L - 7777449 7777577 3'utr CG32369 FlyBase G26553.1 CTGAACTATGTCCCTCTCTATAACACCCCTACTCTCTCTTGATTATGCTTAGGCTAACTAAATGATATGCTCACCTATATGAACCTATATATAAAGTGCTATACGCTAAATGCTTATTTCTGTATTCGT 18 7777476 0.982965206 8 17 126 1 1.380211242 0.041666667 0.277777778 0.458333333 18 0 0 24 3L:7777449-7777577 6 17 1561 FBgn0052369 1823.153333 38.16 58.06666667 0.009324504 0.445492662 0.292766935 0 0 0 0.25 dme-miR-92b-3p 7mer-A1 TGCAATA 3L 7777742 7777748 - 3L_7777742_7777748_- 0.672799123 0.777254626 0.725026875 0.073861192 CG32369 FBtr0304992 7777103 7778469 3L - 7777721 7777757 3'utr CG32369 FlyBase G35105.1 AAGACAATCTGCAATATTTTTTTGATATACCTAAACG 6 7777750 0.990802709 3 4 45 0.714285714 0.698970004 0 0.166666667 0.285714286 6 2 0 5 3L:7777721-7777757 7 CG32369 FBtr0304992 7777103 7778469 TGCAATA 7mer-A1 dme-miR-92b-3p 3L - 7777724 7777772 3'utr CG32369 FlyBase G26555.1 AGCGGCTGGAACTCTAAGACAATCTGCAATATTTTTTTGATATACCTAA 5 7777750 0.990979677 3 4 51 0.8 0.602059991 0.2 0 0 5 1 0 4 3L:7777724-7777772 7 5 1562 FBgn0052369 1823.153333 38.16 58.06666667 0.002742501 0.131027254 0.086107922 2 2 2 0.25 dme-bantam-3p 7mer-A1 GATCTCA 3L 7814496 7814502 - 3L_7814496_7814502_- 0.543096467 0.729622469 0.636359468 0.131893799 Pdp1 FBtr0076775|FBtr0076777|FBtr0306535|FBtr0300500|FBtr0346536|FBtr0076776|FBtr0076782|FBtr0332082|FBtr0332081|FBtr0076780|FBtr0332083|FBtr0332080|FBtr0300499 7814335|7814335|7811456|7814335|7811913|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335 7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325 3L - 7814478 7814526 3'utr Pdp1 FlyBase G35131.1 AATATATAATGAAAACCATACATGGATCTCAAGACAGAGTTAAAGAAAT 18 7814504 0.783370631 2 17 74 0.944444444 1.230448921 0 0 0 18 1 0 17 3L:7814478-7814526 7 Pdp1 FBtr0332080|FBtr0076782|FBtr0076780|FBtr0332082|FBtr0332081|FBtr0332083|FBtr0300499|FBtr0076775|FBtr0076777|FBtr0300500|FBtr0306535|FBtr0076776|FBtr0346536 7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7811456|7814335|7811913 7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325 GATCTCA 7mer-A1 dme-bantam-3p 3L - 7814486 7814520 3'utr Pdp1 FlyBase G26585.1 TAATGAAAACCATACATGGATCTCAAGACAGAGTT 17 7814505 0.73199212 3 17 64 1 1.380211242 0.083333333 0.352941176 0.541666667 17 0 0 24 3L:7814486-7814520 7 17.5 1563 FBgn0016694 2143.56 56.17 86.44 0.008163989 0.31155421 0.202452568 2 3 2.5 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3L 7815088 7815094 - 3L_7815088_7815094_- 0.513553501 0.520592635 0.517073068 0.004977395 Pdp1 FBtr0076775|FBtr0076777|FBtr0306535|FBtr0300500|FBtr0346536|FBtr0076776|FBtr0076782|FBtr0332082|FBtr0332081|FBtr0076780|FBtr0332083|FBtr0332080|FBtr0300499 7814335|7814335|7811456|7814335|7811913|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335 7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325 3L - 7815066 7815117 3'utr Pdp1 FlyBase G35134.1 CAAGAAAAAACTATTTCTTTTGGTGTGATTTGCAAGATCTTAAACAAACAAT 18 7815088 0.912340412 7 17 176 0.96 1.380211242 0.28 0.222222222 0.44 18 1 0 24 3L:7815066-7815117 7 Pdp1 FBtr0332080|FBtr0076782|FBtr0076780|FBtr0332082|FBtr0332081|FBtr0332083|FBtr0300499|FBtr0076775|FBtr0076777|FBtr0300500|FBtr0306535|FBtr0076776|FBtr0346536 7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7814335|7811456|7814335|7811913 7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325|7816325 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 7815069 7815114 3'utr Pdp1 FlyBase G26588.1 GAAAAAACTATTTCTTTTGGTGTGATTTGCAAGATCTTAAACAAAC 12 7815088 0.67966725 7 12 110 1 1.204119983 0.3125 0.333333333 0.5 12 0 0 16 3L:7815069-7815114 7 15 1564 FBgn0016694 2143.56 56.17 86.44 0.006997705 0.267046466 0.173530773 -6 -6 -6 0.25 dme-miR-1012-3p 6mer2-7 TGACTA 3L 7896355 7896360 - 3L_7896355_7896360_- 0.86234806 0.99710475 0.929726405 0.095287376 pbl FBtr0076771|FBtr0076774|FBtr0076773|FBtr0112817|FBtr0076772|FBtr0306647 7896107|7896107|7896107|7896107|7896107|7896107 7896723|7896723|7896723|7896723|7896723|7896723 3L - 7896340 7896379 3'utr pbl FlyBase G35157.1 AATCAACTACTCATTGCAGTGACTAGGGATCGAATTCACG 9 7896366 0.727135316 6 9 48 1 1.041392685 0.090909091 0.111111111 0.272727273 9 0 0 11 3L:7896340-7896379 6 pbl FBtr0076772|FBtr0306647|FBtr0076773|FBtr0112817|FBtr0076771|FBtr0076774 7896107|7896107|7896107|7896107|7896107|7896107 7896723|7896723|7896723|7896723|7896723|7896723 TGACTA 6mer2-7 dme-miR-1012-3p 3L - 7896335 7896478 3'utr pbl FlyBase G26602.1 AGCGTTTGCCCGAGCTGTCGATTGATCATGATTAACTTGTAAATAGTTCTCCATATGTGTACTCCCGTGCCCGTATAATTGTGTCGCGTCGCTAAATGTAATCAACTACTCATTGCAGTGACTAGGGATCGAATTCACGCACGC 31 7896366 0.977227081 13 31 210 1 1.681241237 0.25 0.451612903 0.645833333 31 0 0 48 3L:7896335-7896478 6 9 1565 FBgn0003041 731.33 22.66666667 34.57666667 0.012306346 0.397058824 0.26029114 6 6 6 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 7972314 7972319 + 3L_7972314_7972319_+ 0.999487834 0.990314849 0.994901342 0.006486291 RNaseX25 FBtr0076752|FBtr0076752|FBtr0076752 7971844|7971844|7971844 7972449|7972449|7972449 3L + 7972295 7972325 3'utr RNaseX25 FlyBase G28552.1 AAACTCATATATACTATTTCTGTGACGATTA 6 7972311 0.722315116 2 6 61 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 3L:7972295-7972325 6 RNaseX25 FBtr0076752|FBtr0076752|FBtr0076752 7971844|7971844|7971844 7972449|7972449|7972449 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 7972302 7972337 3'utr RNaseX25 FlyBase G21608.1 TATATACTATTTCTGTGACGATTACCTAATTGTTCT 5 7972323 0.855476523 2 4 46 0.833333333 0.698970004 0 0.2 0.333333333 5 1 0 5 3L:7972302-7972337 6 5.5 1566 FBgn0010406 524.1133333 38.16 57.97666667 0.010493914 0.144129979 0.094865751 3 -9 -3 0.25 dme-miR-304-5p 7mer-m8 TGAGATT 3L 7977838 7977844 - 3L_7977838_7977844_- 0.619878987 0.61988442 0.619881704 3.82E-06 CG8038 FBtr0076763 7977803 7977984 3L - 7977805 7977983 3'utr CG8038 FlyBase G35208.1 AACTACAGGACCAATCATTAGCCATAGAAATTGAATCCTATTGTAATTTAAGGAAAAAAGTTTATTGGAAAGTTAGCATCGCTTTTCAATAGAAATTTAATAATTGCCCTCAAAGATCCTCTAAAACTTTACTTGTATTTGAGATTGTTGTGTTTAATATATATATAAAACCGTACATT 34 7977845 0.988159393 21 32 302 0.909090909 1.124938737 0.159090909 0.205882353 0.386363636 34 2 2 40 3L:7977805-7977983 7 CG8038 FBtr0076763 7977803 7977984 TGAGATT 7mer-m8 dme-miR-304-5p 3L - 7977810 7977882 3'utr CG8038 FlyBase G26638.1 AATTGCCCTCAAAGATCCTCTAAAACTTTACTTGTATTTGAGATTGTTGTGTTTAATATATATATAAAACCGT 16 7977846 0.986385513 10 16 142 1 1.414973348 0.153846154 0.5 0.692307692 16 0 0 26 3L:7977810-7977882 7 11.5 1567 FBgn0035831 191 28.52666667 43.6 0.060209424 0.403131573 0.263761468 1 2 1.5 0.25 dme-miR-1008-3p 6mer2-7 GCTGTG 3L 8087780 8087785 - 3L_8087780_8087785_- 0.647506725 0.50000331 0.573755017 0.104300654 CG7565 FBtr0076738 8087633 8087997 3L - 8087650 8087804 3'utr CG7565 FlyBase G35223.1 TATATTATTTTAAGCTGCTGCTGTGCAACAAGTATTATATTTAATGTTTATTTCTACTGCGATACTTTTTATGTGTGTATATAGACATAGCTGTTCACAATCAATGTAACAAACGACATGTAACTGCTTAAAAGTGCATTATTACCCACATTAAA 75 8087787 0.990295055 26 72 728 0.964705882 1.913813852 0.141176471 0.12 0.223529412 75 3 0 82 3L:8087650-8087804 6 CG7565 FBtr0076738 8087633 8087997 GCTGTG 6mer2-7 dme-miR-1008-3p 3L - 8087676 8087803 3'utr CG7565 FlyBase G26650.1 ATATTATTTTAAGCTGCTGCTGTGCAACAAGTATTATATTTAATGTTTATTTCTACTGCGATACTTTTTATGTGTGTATATAGACATAGCTGTTCACAATCAATGTAACAAACGACATGTAACTGCTT 41 8087787 0.904267131 19 39 414 0.947368421 1.73239376 0.140350877 0.341463415 0.526315789 41 3 0 54 3L:8087676-8087803 6 27.5 1568 FBgn0035833 598.6666667 19.29666667 29.46666667 0.045935412 1.4251166 0.933257919 2 2 2 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 8087922 8087928 - 3L_8087922_8087928_- 0.674172387 0.594897682 0.634535034 0.056055678 CG7565 FBtr0076738|FBtr0076738|FBtr0076738 8087633|8087633|8087633 8087997|8087997|8087997 3L - 8087806 8087967 3'utr CG7565 FlyBase G35224.1 AAATATGTGTGTGTGTTAGTCGATCTACTATACCGTGTGTGTGATATCTATTTGTATTTCTATAATGTACTCGGATCTTTTGTACTTTCCGCAAAACTCGTCTGAAGTCAAGTTGTCTATAAGTTCCTTTACGTGCAATTATTTTAAGTTAAGAGTCATTCT 110 8087930 0.808693797 30 105 1077 0.955882353 2.113943352 0.132352941 0.209090909 0.360294118 110 6 0 130 3L:8087806-8087967 7 CG7565 FBtr0076738|FBtr0076738|FBtr0076738 8087633|8087633|8087633 8087997|8087997|8087997 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 8087808 8087944 3'utr CG7565 FlyBase G26651.1 TCTACTATACCGTGTGTGTGATATCTATTTGTATTTCTATAATGTACTCGGATCTTTTGTACTTTCCGCAAAACTCGTCTGAAGTCAAGTTGTCTATAAGTTCCTTTACGTGCAATTATTTTAAGTTAAGAGTCATT 70 8087930 0.923504311 17 66 659 0.962962963 1.716003344 0.037037037 0.428571429 0.62962963 70 3 1 104 3L:8087808-8087944 7 52.5 1569 FBgn0035833 598.6666667 19.29666667 29.46666667 0.087694878 2.720677146 1.781674208 2 2 2 0.25 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3L 8105838 8105843 + 3L_8105838_8105843_+ 0.703236571 0.633722542 0.668479556 0.049153891 Ect4 FBtr0304994 8105751 8108836 3L + 8105740 8105878 stop_codon Ect4 FlyBase G28596.1 GGCTCCAGCGTAGAGTGAGCCAAGTTATGCTAACGATTTACAGAGCTAGCCAACTCGAATATGTTCTAGGCTTAAGCAGAGATCCTCAAGTCACACTCTCTAGTACAACTCTCTCTCACTTTCTACCCCCACCCATACA 85 8105840 0.984608114 19 70 557 0.833333333 1.057991947 0.0625 0.105882353 0.208333333 85 10 6 80 3L:8105740-8105878 6 Ect4 FBtr0304994 8105751 8108836 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 8105795 8105870 3'utr Ect4 FlyBase G21642.1 CGAATATGTTCTAGGCTTAAGCAGAGATCCTCAAGTCACACTCTCTAGTACAACTCTCTCTCACTTTCTACCCCCA 36 8105840 0.781684767 10 29 253 0.829787234 0.989004616 0.063829787 0.222222222 0.404255319 36 5 3 39 3L:8105795-8105870 6 40.5 1570 FBgn0262579 2855.543333 63.41666667 97.15666667 0.01418294 0.638633377 0.416852506 -2 -2 -2 0.25 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 8106012 8106018 + 3L_8106012_8106018_+ 0.801072367 0.796571458 0.798821912 0.003182617 Ect4 FBtr0304994 8105751 8108836 3L + 8105885 8106045 3'utr Ect4 FlyBase G28597.1 ACTTTCTCACTCAACTCAAGCAACCCATTACAACTACACTATCCATTACTCTTTACTCTTACCAATTAATAATTGATTTAATTCTGATTGCCACACACTCGAAATCGCTTGAAACGCCGTCTCATGCGCAGCTAATCACCAGGCAAATAGGTACCGCCAAT 55 8106009 0.913930648 15 52 347 0.951612903 1.469822016 0.080645161 0.109090909 0.209677419 55 2 1 59 3L:8105885-8106045 7 Ect4 FBtr0304994 8105751 8108836 GCAGCTA 7mer-A1 dme-miR-980-3p 3L + 8105885 8106039 3'utr Ect4 FlyBase G21643.1 ACTTTCTCACTCAACTCAAGCAACCCATTACAACTACACTATCCATTACTCTTTACTCTTACCAATTAATAATTGATTTAATTCTGATTGCCACACACTCGAAATCGCTTGAAACGCCGTCTCATGCGCAGCTAATCACCAGGCAAATAGGTACC 34 8106009 0.987127491 16 28 244 0.777777778 1.544068044 0.155555556 0.303030303 0.488888889 33 10 0 35 3L:8105885-8106039 7 15 1571 FBgn0262579 2855.543333 63.41666667 97.15666667 0.005252941 0.23653088 0.154389817 3 3 3 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 3L 8123643 8123648 - 3L_8123643_8123648_- 0.998859477 0.999790583 0.99932503 0.000658387 CG7550 FBtr0076736 8123610 8123736 3L - 8123630 8123668 3'utr CG7550 FlyBase G35244.1 CGTATCAGCCAAGTATCTTCTGTGTTATTTAAATAAAAT 16 8123650 0.65486311 8 14 177 0.875 0.669006781 0.0625 0 0 16 0 2 14 3L:8123630-8123668 6 CG7550 FBtr0076736 8123610 8123736 TGTGTT 6mer3-8 dme-miR-317-3p 3L - 8123630 8123664 3'utr CG7550 FlyBase G26668.1 TCAGCCAAGTATCTTCTGTGTTATTTAAATAAAAT 9 8123650 0.613164019 6 8 89 0.714285714 1 0.285714286 0.333333333 0.571428571 9 4 0 10 3L:8123630-8123664 6 12.5 1572 FBgn0035839 38.33333333 5.32 8.246666667 0.326086957 2.34962406 1.515763945 2 2 2 0.25 dme-miR-92b-3p 7mer-m8 GTGCAAT 3L 8131118 8131124 + 3L_8131118_8131124_+ 0.658989264 0.64810117 0.653545217 0.007699049 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 3L + 8131095 8131133 3'utr CdsA FlyBase G28656.1 TTTATTTGGCAGAACTCTACACAGTGCAATCGTATTGTT 6 8131112 0.685221027 5 6 38 1 0.77815125 0 0 0 6 0 0 6 3L:8131095-8131133 7 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 GTGCAAT 7mer-m8 dme-miR-92b-3p 3L + 8131096 8131146 3'utr CdsA FlyBase G21697.1 TTATTTGGCAGAACTCTACACAGTGCAATCGTATTGTTAAGCGATTCCATT 8 8131128 0.623481819 7 8 59 1 1.113943352 0.230769231 0.5 0.692307692 8 0 0 13 3L:8131096-8131146 7 6 1573 FBgn0010350 708.1033333 35.43 53.93 0.00847334 0.16934801 0.111255331 6 -10 -2 0.25 dme-miR-33-5p 6mer3-8 CAATGC 3L 8131378 8131383 + 3L_8131378_8131383_+ 0.801973965 0.887020645 0.844497305 0.060137028 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 3L + 8131314 8131406 3'utr CdsA FlyBase G28659.1 AGCGCATTTTAGTTAAATACCTGAGGGACGAAATTATGAGATCAAGATACCAGGAAAACTCTTGCAATGCTGTAATTCTATATATAATAGTGC 56 8131381 0.776535826 11 52 343 0.944444444 1.832508913 0.166666667 0.25 0.416666667 56 4 0 68 3L:8131314-8131406 6 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 CAATGC 6mer3-8 dme-miR-33-5p 3L + 8131283 8131409 3'utr CdsA FlyBase G21699.1 AACGCCAGAATCTGGAGATTAGCATAATTAAAGCGCATTTTAGTTAAATACCTGAGGGACGAAATTATGAGATCAAGATACCAGGAAAACTCTTGCAATGCTGTAATTCTATATATAATAGTGCAAT 31 8131381 0.925496026 17 30 216 0.972222222 1.544068044 0.111111111 0.161290323 0.277777778 31 1 0 35 3L:8131283-8131409 6 18.5 1574 FBgn0010350 708.1033333 35.43 53.93 0.02612613 0.522156365 0.343037271 -3 -3 -3 0.25 dme-miR-305-5p 7mer-A1 GTACAAA 3L 8131626 8131632 + 3L_8131626_8131632_+ 0.782846396 0.586943305 0.68489485 0.13852441 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 3L + 8131577 8131652 3'utr CdsA FlyBase G28661.1 GGCATTTAAGAACGAAAATGCAATTCGTCGGCGTTTTAAAGAACTAAATGTACAAAGATTTCAATATTAAATCTTA 16 8131625 0.963480593 7 15 82 0.952380952 1.301029996 0.285714286 0.3125 0.476190476 16 1 0 20 3L:8131577-8131652 7 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 GTACAAA 7mer-A1 dme-miR-305-5p 3L + 8131587 8131640 3'utr CdsA FlyBase G21700.1 AACGAAAATGCAATTCGTCGGCGTTTTAAAGAACTAAATGTACAAAGATTTCAA 25 8131625 0.95399064 6 24 125 0.966666667 1.462397998 0.066666667 0.2 0.333333333 25 1 0 29 3L:8131587-8131640 7 17.5 1575 FBgn0010350 708.1033333 35.43 53.93 0.024713907 0.493931696 0.324494715 1 1 1 0.25 dme-miR-14-3p 6mer2-7 AGACTG 3L 8131653 8131658 - 3L_8131653_8131658_- 0.999989242 0.999996729 0.999992986 5.30E-06 CG7504 FBtr0273367|FBtr0273368 8131427|8131427 8131796|8131796 3L - 8131618 8131696 3'utr CG7504 FlyBase G35266.1 AAAAAAGGCTTTGTTATTTTTATATATATTTAACATAGAGACTGTAAGATTTAATATTGAAATCTTTGTACATTTAGTT 29 8131654 0.987865704 10 27 243 0.933333333 1.447158031 0.066666667 0.034482759 0.066666667 29 2 0 28 3L:8131618-8131696 6 CG7504 FBtr0273367|FBtr0273368 8131427|8131427 8131796|8131796 AGACTG 6mer2-7 dme-miR-14-3p 3L - 8131556 8131679 3'utr CG7504 FlyBase G26681.1 TTTTATATATATTTAACATAGAGACTGTAAGATTTAATATTGAAATCTTTGTACATTTAGTTCTTTAAAACGCCGACGAATTGCATTTTCGTTCTTAAATGCCGTACAGTATAACAGGATTTAT 31 8131654 0.98514446 10 27 227 0.888888889 1.602059991 0.111111111 0.290322581 0.511111111 31 5 0 40 3L:8131556-8131679 6 22.5 1576 FBgn0035842 670.3266667 14.32333333 21.90333333 0.033565724 1.570863393 1.027240907 -4 -4 -4 0.25 dme-miR-184-5p 6mer3-8 TGATAA 3L 8170708 8170713 - 3L_8170708_8170713_- 0.775638925 0.945051802 0.860345363 0.11979301 RecQ4 FBtr0076729 8170638 8170818 3L - 8170704 8170731 3'utr RecQ4 FlyBase G35284.1 ATTTTACTCGCACAAGTCTGATAATACA 8 8170709 0.710080714 3 8 39 1 1 0 0.25 0.4 8 0 0 10 3L:8170704-8170731 6 RecQ4 FBtr0076729 8170638 8170818 TGATAA 6mer3-8 dme-miR-184-5p 3L - 8170699 8170727 3'utr RecQ4 FlyBase G26690.1 TACTCGCACAAGTCTGATAATACAAAAAT 5 8170710 0.647048515 2 5 21 1 0.903089987 0 0.4 0.625 5 0 0 8 3L:8170699-8170727 6 6.5 1577 FBgn0040290 522 12.57 19.37666667 0.012452107 0.517104216 0.335455015 -4 -3 -3.5 0.25 dme-miR-283-5p 8mer-m1 TGATATTT 3L 8190664 8190671 + 3L_8190664_8190671_+ 0.462966853 0.409497608 0.436232231 0.037808505 Atg18a FBtr0321321|FBtr0076693|FBtr0321320|FBtr0076692|FBtr0076691|FBtr0321319|FBtr0346547 8189976|8189976|8190267|8189976|8189976|8190267|8189976 8190714|8191118|8190965|8190714|8190714|8190714|8190714 3L + 8190568 8190696 3'utr Atg18a FlyBase G28679.1 CGTTCCTGGCGCTGCCATTGGAATGTGAAATGCTTTTGTCATACACTCCTAAGTTAGTTGTTAATTAATAATTTAGACGGATTTACAGATTCGCTTTGATATTTGAGTTGCCAGCTTTTTATACAAAAT 57 8190658 0.83097122 21 56 525 1 1.806179974 0.21875 0.122807018 0.21875 57 0 0 64 3L:8190568-8190696 8 Atg18a FBtr0346547|FBtr0076691|FBtr0321319|FBtr0321320|FBtr0076692|FBtr0321321|FBtr0076693 8189976|8189976|8190267|8190267|8189976|8189976|8189976 8190714|8190714|8190714|8190965|8190714|8190714|8191118 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 8190634 8190674 3'utr Atg18a FlyBase G21717.1 AATAATTTAGACGGATTTACAGATTCGCTTTGATATTTGAG 24 8190657 0.982836463 5 24 195 1 1.612783857 0.097560976 0.5 0.707317073 24 0 0 41 3L:8190634-8190674 8 23.5 1578 FBgn0035850 441.6666667 25.08666667 38.37666667 0.053207547 0.936752591 0.612351255 6 7 6.5 0.25 dme-miR-968-5p 6mer2-7 CTACTT 3L 8191053 8191058 + 3L_8191053_8191058_+ 0.565257653 0.550915133 0.558086393 0.01014175 Atg18a FBtr0076693 8189976 8191118 3L + 8191030 8191076 3'utr Atg18a FlyBase G28680.1 AGTTTACAAATGAAACTCATACGCTACTTTATTGTATTCAATAAATT 21 8191058 0.728716113 6 21 185 1 1.397940009 0 0.19047619 0.32 21 0 0 25 3L:8191030-8191076 6 Atg18a FBtr0076693 8189976 8191118 CTACTT 6mer2-7 dme-miR-968-5p 3L + 8191030 8191070 3'utr Atg18a FlyBase G21718.1 AGTTTACAAATGAAACTCATACGCTACTTTATTGTATTCAA 15 8191058 0.648308209 5 15 112 1 1.397940009 0.04 0.333333333 0.6 15 0 0 25 3L:8191030-8191070 6 17 1579 FBgn0035850 441.6666667 25.08666667 38.37666667 0.038490566 0.677650811 0.442977504 -5 -5 -5 0.25 dme-miR-34-5p 6mer3-8 CACTGC 3L 8196599 8196604 - 3L_8196599_8196604_- 0.769488487 0.944949849 0.857219168 0.124069875 UbcE2M FBtr0332139|FBtr0076722|FBtr0332138 8195845|8196531|8196531 8196739|8196739|8196739 3L - 8196580 8196648 3'utr UbcE2M FlyBase G35302.1 AACATCGGCGACAACAAATTATTGTAATAAACGAAAACAAAATCCACTGCGTGCAAAGAAGAAGCCGAG 9 8196601 0.820733226 3 9 20 1 1.079181246 0 0.222222222 0.416666667 9 0 0 12 3L:8196580-8196648 6 UbcE2M FBtr0332138|FBtr0332139|FBtr0076722 8196531|8195845|8196531 8196739|8196739|8196739 CACTGC 6mer3-8 dme-miR-34-5p 3L - 8196588 8196630 3'utr UbcE2M FlyBase G26709.1 TTATTGTAATAAACGAAAACAAAATCCACTGCGTGCAAAGAAG 10 8196601 0.768665859 3 9 32 0.9375 1.176091259 0 0.4 0.625 10 1 0 15 3L:8196588-8196630 6 7.5 1580 FBgn0035853 344.1466667 39.61666667 60.33 0.021793034 0.189314262 0.124316261 -3 -3 -3 0.25 dme-miR-34-5p 6mer2-7 ACTGCC 3L 826829 826834 - 3L_826829_826834_- 0.976628617 0.98093125 0.978779934 0.003042468 CG13900 FBtr0331404|FBtr0072597 826718|826718 830720|827877 3L - 826717 826874 3'utr CG13900 FlyBase G33124.1 ATACTAACTGCACATTAAATCACCGATCAACCACTAATCGACTGCCGCATATTTAAACTAGCATATAAGTCAGTGCAAACTCGACAAATTGCACAACCTAAATATAAACCCCTAATCATAAGCAATTTTTAACTTAAATAAAAGTAACTGAAAACAAA 753 826837 0.772646782 25 721 3085 0.959954233 1.923761961 0.177345538 0.139442231 0.258581236 753 26 9 839 3L:826717-826874 6 CG13900 FBtr0072597|FBtr0331404 826718|826718 827877|830720 ACTGCC 6mer2-7 dme-miR-34-5p 3L - 826751 826872 3'utr CG13900 FlyBase G25063.1 ACTAACTGCACATTAAATCACCGATCAACCACTAATCGACTGCCGCATATTTAAACTAGCATATAAGTCAGTGCAAACTCGACAAATTGCACAACCTAAATATAAACCCCTAATCATAAGCA 388 826838 0.947575908 17 359 1522 0.928455285 1.853546121 0.22601626 0.412371134 0.629268293 388 37 7 571 3L:826751-826872 6 515 1581 FBgn0035162 4015.156667 113.57 173.3966667 0.128263986 4.534648235 2.970068629 3 4 3.5 0.25 dme-miR-307a-3p 6mer2-7 GTTGTG 3L 826976 826981 - 3L_826976_826981_- 0.999333881 0.94549927 0.972416575 0.038066811 CG13900 FBtr0331404|FBtr0072597 826718|826718 830720|827877 3L - 826950 827003 intron-3'utr CG13900 FlyBase G33125.1 AGATCTTCTTACGTTGGGGTATGTTGTGGCGCTTAATTCTAACTAAATTATACA 12 826979 0.988546395 7 12 114 1 1.113943352 0.230769231 0.083333333 0.153846154 12 0 0 13 3L:826950-827003 6 CG13900 FBtr0072597|FBtr0331404 826718|826718 827877|830720 GTTGTG 6mer2-7 dme-miR-307a-3p 3L - 826954 827003 intron-3'utr CG13900 FlyBase G25064.1 AGATCTTCTTACGTTGGGGTATGTTGTGGCGCTTAATTCTAACTAAATTA 11 826978 0.982079479 7 11 89 1 1.176091259 0.333333333 0.272727273 0.466666667 11 0 0 15 3L:826954-827003 6 11.5 1582 FBgn0035162 4015.156667 113.57 173.3966667 0.002864147 0.101259135 0.066321921 -2 -3 -2.5 0.25 dme-miR-33-5p 7mer-A1 AATGCAA 3L 8282717 8282723 - 3L_8282717_8282723_- 0.72223051 0.782910398 0.752570454 0.042907169 cert FBtr0345035|FBtr0332136|FBtr0076717 8282526|8282526|8282526 8283085|8283085|8283085 3L - 8282654 8282798 3'utr cert FlyBase G35311.1 TGAAACACAATCATTGTATAGATCTTAGTTCCAAAACTTTCTATCTGTAGTGTATATCTTTATGGAAATGCTTTAAATGCAACAATTGCAAGAATGATGTGAGGGATGCATAGCTACATATACGAAAGCTTTTCTTTTGGTGTGA 29 8282730 0.980490007 12 29 211 1 1.531478917 0.117647059 0.172413793 0.294117647 29 0 0 34 3L:8282654-8282798 7 cert FBtr0345035|FBtr0332136|FBtr0076717 8282526|8282526|8282526 8283085|8283085|8283085 AATGCAA 7mer-A1 dme-miR-33-5p 3L - 8282703 8282750 3'utr cert FlyBase G26720.1 AGTGTATATCTTTATGGAAATGCTTTAAATGCAACAATTGCAAGAATG 7 8282722 0.991769521 4 5 56 0.888888889 0.903089987 0.111111111 0.285714286 0.444444444 7 1 0 8 3L:8282703-8282750 7 10 1583 FBgn0027569 860.3466667 42.59 65.35666667 0.011623222 0.234796901 0.153006579 7 -1 3 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 8298258 8298263 + 3L_8298258_8298263_+ 0.984040729 0.979668516 0.981854622 0.003091612 Rab19 FBtr0076705|FBtr0076705|FBtr0076705|FBtr0331832|FBtr0331832|FBtr0331832 8298223|8298223|8298223|8298223|8298223|8298223 8298506|8298506|8298506|8298506|8298506|8298506 3L + 8298192 8298309 stop_codon Rab19 FlyBase G28696.1 AAGAGTTGCAGCAGCTCATGCAATCTCACCTAGACCTAAATCCGCTCTTTAGTTTGCTTTTACTTTTGTGATCAAATTGTTCTTGTGGCTATATATTAGTATTCTAATGCTTTAACCT 91 8298256 0.960949404 17 82 1009 0.901960784 1.361727836 0.156862745 0.10989011 0.205882353 91 7 3 92 3L:8298192-8298309 6 Rab19 FBtr0331832|FBtr0331832|FBtr0331832|FBtr0076705|FBtr0076705|FBtr0076705 8298223|8298223|8298223|8298223|8298223|8298223 8298506|8298506|8298506|8298506|8298506|8298506 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 8298234 8298301 3'utr Rab19 FlyBase G21730.1 CGCTCTTTAGTTTGCTTTTACTTTTGTGATCAAATTGTTCTTGTGGCTATATATTAGTATTCTAATGC 69 8298256 0.714657309 12 68 762 0.989795918 1.685741739 0.183673469 0.31884058 0.520408163 69 0 1 97 3L:8298234-8298301 6 63.5 1584 FBgn0015793 126.0033333 15.34 23.52333333 0.503954922 4.139504563 2.699447357 2 2 2 0.25 dme-miR-13b-2-5p 8mer-A1 TTTGACGA 3L 8298349 8298356 + 3L_8298349_8298356_+ 0.597732272 0.601110436 0.599421354 0.002388677 Rab19 FBtr0076705|FBtr0331832 8298223|8298223 8298506|8298506 3L + 8298342 8298375 3'utr Rab19 FlyBase G28697.1 ATTTATTTTTGACGATAGAGTACAAACAATCTCA 5 8298356 0.777445187 3 5 28 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 3L:8298342-8298375 8 Rab19 FBtr0331832|FBtr0076705 8298223|8298223 8298506|8298506 TTTGACGA 8mer-A1 dme-miR-13b-2-5p 3L + 8298315 8298379 3'utr Rab19 FlyBase G21731.1 TAGACACTAACTTTTACACAACCATGTATTTATTTTTGACGATAGAGTACAAACAATCTCACACA 7 8298351 0.98568958 6 6 56 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 3L:8298315-8298379 8 5 1585 FBgn0015793 126.0033333 15.34 23.52333333 0.03968149 0.325945241 0.21255491 -7 -2 -4.5 0.25 dme-miR-283-5p 8mer-m1 TGATATTT 3L 8302254 8302261 + 3L_8302254_8302261_+ 0.551244039 0.55554201 0.553393025 0.003039145 CG13671 FBtr0076706 8302211 8302341 3L + 8302238 8302288 3'utr CG13671 FlyBase G28703.1 AGTTAAAAGTTACCGTTGATATTTCCTGTAGATCGTAAGGCTAAAGTTGTC 28 8302254 0.751566411 7 26 251 0.914285714 1.505149978 0.314285714 0.25 0.4 28 3 0 32 3L:8302238-8302288 8 CG13671 FBtr0076706 8302211 8302341 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 8302238 8302286 3'utr CG13671 FlyBase G21734.1 AGTTAAAAGTTACCGTTGATATTTCCTGTAGATCGTAAGGCTAAAGTTG 16 8302258 0.669530582 7 12 124 0.75862069 1.041392685 0.137931034 0.6875 0.827586207 16 6 1 22 3L:8302238-8302286 8 17.5 1586 FBgn0035867 449.54 23.89 36.41666667 0.038928683 0.732524069 0.480549199 0 -4 -2 0.25 dme-bantam-3p 6mer2-7 GATCTC 3L 836596 836601 + 3L_836596_836601_+ 0.622273171 0.413312029 0.5177926 0.147757882 CG42554 FBtr0301253 836552 836770 3L + 836579 836651 3'utr CG42554 FlyBase G26909.1 CTTCAACTAATTTGAAAGATCTCGTGGTAATGCAGTGCCCGCTGAGTGGTGATTAGGATTTAATTTTAGGCAC 45 836603 0.639228599 14 41 322 0.890909091 0.991226076 0.254545455 0.222222222 0.363636364 45 2 4 49 3L:836579-836651 6 CG42554 FBtr0301253 836552 836770 GATCTC 6mer2-7 dme-bantam-3p 3L + 836572 836644 3'utr CG42554 FlyBase G20367.1 TGTAAAACTTCAACTAATTTGAAAGATCTCGTGGTAATGCAGTGCCCGCTGAGTGGTGATTAGGATTTAATTT 34 836603 0.856427737 13 33 242 0.980392157 1.698970004 0.156862745 0.382352941 0.588235294 34 1 0 50 3L:836572-836644 6 27 1587 FBgn0260756 37.16 4.52 6.893333333 0.726587729 5.973451327 3.916827853 -7 -7 -7 0.25 dme-bantam-3p 7mer-m8 TGATCTC 3L 840010 840016 - 3L_840010_840016_- 0.650695165 0.655807651 0.653251408 0.003615083 CG13902 FBtr0331402|FBtr0300712 839978|839978 840057|840057 3L - 839995 840028 3'utr CG13902 FlyBase G33156.1 ATTTATGTAGGATGATCTCTGTTCAAGTTAAGAT 13 840016 0.746872939 3 13 104 1 1.176091259 0.066666667 0.153846154 0.266666667 13 0 0 15 3L:839995-840028 7 CG13902 FBtr0300712|FBtr0331402 839978|839978 840057|840057 TGATCTC 7mer-m8 dme-bantam-3p 3L - 839990 840024 3'utr CG13902 FlyBase G25084.1 ATGTAGGATGATCTCTGTTCAAGTTAAGATTAAAG 6 840016 0.981906274 3 6 41 1 1 0 0.333333333 0.6 6 0 0 10 3L:839990-840024 7 9 1588 FBgn0035166 125.3433333 11.64666667 17.69 0.071802782 0.772753291 0.508762012 0 0 0 0.25 dme-miR-184-3p 8mer-A1 TCCGTCCA 3L 8407329 8407336 - 3L_8407329_8407336_- 0.630448766 0.630533507 0.630491137 5.99E-05 Oseg1 FBtr0345038|FBtr0076663 8407266|8407266 8407370|8407370 3L - 8407307 8407360 3'utr Oseg1 FlyBase G35375.1 AGAAGTGTGTGCAAATATATAATTTCCGTCCAAAACTGTACAAATAGGAACTAT 123 8407337 0.721228656 3 123 872 1 2.167317335 0.040816327 0.146341463 0.285714286 123 0 0 147 3L:8407307-8407360 8 Oseg1 FBtr0076663|FBtr0345038 8407266|8407266 8407370|8407370 TCCGTCCA 8mer-A1 dme-miR-184-3p 3L - 8407305 8407358 3'utr Oseg1 FlyBase G26767.1 AAGTGTGTGCAAATATATAATTTCCGTCCAAAACTGTACAAATAGGAACTATAC 99 8407337 0.701736893 5 96 665 0.964788732 2.136720567 0.070422535 0.333333333 0.535211268 99 5 0 137 3L:8407305-8407358 8 111 1589 FBgn0265102 118.8066667 3.826666667 5.82 0.934291005 29.00696864 19.07216495 1 1 1 0.25 dme-miR-970-3p 8mer-A1 TCTTATGA 3L 8427483 8427490 + 3L_8427483_8427490_+ 0.6300487 0.630254527 0.630151613 0.000145523 Cbl FBtr0076614 8427408 8428655 3L + 8427401 8427581 lincRNA_exon-lincRNA_intron Cbl FlyBase G28745.1 GAGGTATAGTTTTGTTCACAGCCTGATCAGCCTGATCCGCCTGCTCCGCTGCCGCCTGTGCTGCTATTTATATACATATTACTCTTATGATTACCTTTGGTTCGTTTATACAGTTATATATGCCTATATATACATTATATATTTTAGATTTTACAACTGCTATTGTTTATATAAGTTTAAT 61 8427491 0.987756108 26 59 536 0.971014493 1.348953548 0.15942029 0.098360656 0.202898551 61 0 2 67 3L:8427401-8427581 8 Cbl FBtr0076614 8427408 8428655 TCTTATGA 8mer-A1 dme-miR-970-3p 3L + 8427406 8427504 stop_codon Cbl FlyBase G21771.1 ATAGTTTTGTTCACAGCCTGATCAGCCTGATCCGCCTGCTCCGCTGCCGCCTGTGCTGCTATTTATATACATATTACTCTTATGATTACCTTTGGTTCG 35 8427497 0.989904453 16 31 305 0.884615385 1.185636577 0.096153846 0.342857143 0.557692308 35 4 2 46 3L:8427406-8427504 8 21.5 1590 FBgn0020224 1487.473333 60.45 92.97666667 0.014454041 0.35566584 0.231240813 -8 -14 -11 0.25 dme-miR-1006-3p 7mer-A1 GAATTTA 3L 8427989 8427995 + 3L_8427989_8427995_+ 0.681952992 0.639576365 0.660764679 0.029964781 Cbl FBtr0076614 8427408 8428655 3L + 8427971 8428044 3'utr Cbl FlyBase G28747.1 TTGTACATAGGCACTATGGAATTTATAATTGTAACCTGTTCTGTATTATTCGTTGAATTTTCTCTTTCACATCC 9 8427987 0.984746636 5 7 76 0.888888889 0.903089987 0.222222222 0 0 9 1 0 8 3L:8427971-8428044 7 Cbl FBtr0076614 8427408 8428655 GAATTTA 7mer-A1 dme-miR-1006-3p 3L + 8427976 8428023 3'utr Cbl FlyBase G21772.1 CATAGGCACTATGGAATTTATAATTGTAACCTGTTCTGTATTATTCGT 7 8427987 0.87987295 4 7 67 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 3L:8427976-8428023 7 4 1591 FBgn0020224 1487.473333 60.45 92.97666667 0.002689124 0.066170389 0.043021547 2 2 2 0.25 dme-miR-14-3p 7mer-m8 AAGACTG 3L 8428258 8428264 + 3L_8428258_8428264_+ 0.671605426 0.671760603 0.671683015 0.000109743 Cbl FBtr0076614 8427408 8428655 3L + 8428231 8428285 3'utr Cbl FlyBase G28749.1 ATTTGTAAGCAGCCAACGCGCTGCCCTAAGACTGTAATTTATTATTAACAAAAAA 68 8428257 0.800300049 9 55 480 0.805194805 0.83814918 0 0.132352941 0.233766234 68 7 8 62 3L:8428231-8428285 7 Cbl FBtr0076614 8427408 8428655 AAGACTG 7mer-m8 dme-miR-14-3p 3L + 8428234 8428287 3'utr Cbl FlyBase G21774.1 TGTAAGCAGCCAACGCGCTGCCCTAAGACTGTAATTTATTATTAACAAAAAAAA 48 8428257 0.76662485 10 40 309 0.824324324 1.183269844 0 0.333333333 0.567567568 48 10 3 61 3L:8428234-8428287 7 56 1592 FBgn0020224 1487.473333 60.45 92.97666667 0.037647734 0.926385443 0.602301653 1 1 1 0.25 dme-bantam-3p 6mer3-8 TGATCT 3L 8433535 8433540 - 3L_8433535_8433540_- 0.986250762 0.986796818 0.98652379 0.00038608 Unr FBtr0345595|FBtr0308954|FBtr0332984|FBtr0114592 8432320|8432320|8433230|8433230 8434468|8434468|8434468|8434468 3L - 8433517 8433554 3'utr Unr FlyBase G35387.1 TATTTCCCATGATTTGATCTTCGCTTGTATAAACACGT 30 8433540 0.688667363 6 26 290 0.897435897 1.243038049 0.128205128 0.2 0.384615385 30 3 1 35 3L:8433517-8433554 6 Unr FBtr0114592|FBtr0308954|FBtr0332984|FBtr0345595 8433230|8432320|8433230|8432320 8434468|8434468|8434468|8434468 TGATCT 6mer3-8 dme-bantam-3p 3L - 8433505 8433556 3'utr Unr FlyBase G26776.1 ATTATTTCCCATGATTTGATCTTCGCTTGTATAAACACGTCAAGTGGTTTTG 20 8433541 0.783196371 11 20 206 1 1.491361694 0.096774194 0.4 0.612903226 20 0 0 31 3L:8433505-8433556 6 23 1593 FBgn0263352 12905.48667 184.7766667 285.27 0.001782188 0.124474591 0.080625372 0 1 0.5 0.25 dme-bantam-3p 6mer3-8 TGATCT 3L 8433800 8433805 - 3L_8433800_8433805_- 0.879323851 0.996726122 0.938024986 0.083015892 Unr FBtr0345595|FBtr0308954|FBtr0332984|FBtr0114592 8432320|8432320|8433230|8433230 8434468|8434468|8434468|8434468 3L - 8433791 8433846 3'utr Unr FlyBase G35389.1 ATTTATCTATGGCTGGCATAGTTCCTGCTTCTATTGTATCTTGATCTACTCGTATT 8 8433827 0.74579482 7 7 91 0.9 0.653212514 0.3 0.25 0.4 8 0 1 9 3L:8433791-8433846 6 Unr FBtr0114592|FBtr0308954|FBtr0332984|FBtr0345595 8433230|8432320|8433230|8432320 8434468|8434468|8434468|8434468 TGATCT 6mer3-8 dme-bantam-3p 3L - 8433791 8433834 3'utr Unr FlyBase G26779.1 CTGGCATAGTTCCTGCTTCTATTGTATCTTGATCTACTCGTATT 7 8433806 0.913247696 3 4 70 0.75 0.77815125 0.25 0.142857143 0.25 7 2 0 6 3L:8433791-8433834 6 5 1594 FBgn0263352 12905.48667 184.7766667 285.27 0.000387432 0.027059694 0.017527255 22 1 11.5 0.25 dme-miR-184-5p 6mer2-7 GATAAG 3L 8433968 8433973 - 3L_8433968_8433973_- 0.931062977 0.669724134 0.800393555 0.184794508 Unr FBtr0345595|FBtr0308954|FBtr0332984|FBtr0114592 8432320|8432320|8433230|8433230 8434468|8434468|8434468|8434468 3L - 8433956 8433985 3'utr Unr FlyBase G35391.1 AAAACCGATTGGGATAAGTGATGAGAGCAA 8 8433977 0.851583007 2 4 29 0.666666667 0.77815125 0.111111111 0.125 0.222222222 8 3 0 6 3L:8433956-8433985 6 Unr FBtr0114592|FBtr0308954|FBtr0332984|FBtr0345595 8433230|8432320|8433230|8432320 8434468|8434468|8434468|8434468 GATAAG 6mer2-7 dme-miR-184-5p 3L - 8433944 8433990 3'utr Unr FlyBase G26781.1 AATTAAAAACCGATTGGGATAAGTGATGAGAGCAAGGAAACGAGCAA 12 8433977 0.95559408 3 10 42 0.833333333 0.875061263 0 0.5 0.666666667 12 2 1 15 3L:8433944-8433990 6 9.5 1595 FBgn0263352 12905.48667 184.7766667 285.27 0.000736121 0.051413418 0.033301784 4 4 4 0.25 dme-miR-317-3p 8mer-A1 TGTGTTCA 3L 8470858 8470865 + 3L_8470858_8470865_+ 0.603782126 0.619110277 0.611446202 0.010838674 Gug FBtr0305699|FBtr0076618|FBtr0305696|FBtr0305697|FBtr0305698|FBtr0076616|FBtr0333048|FBtr0076619 8470769|8470769|8470769|8470769|8470769|8470769|8470769|8470769 8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669 3L + 8470756 8470887 stop_codon Gug FlyBase G28769.1 CAACGGCCCAGATAAGTGGACAGACAGCAATTGTAGAGAGCAAGCAACTGAACAAAGACAATACTCGGGCCGCGGCCGTGAGGAACTGCTTTGTGTGATTTTTGTGTTCAAGCGTTTACATTTTGTTTTCCA 92 8470857 0.974565337 18 86 533 0.930434783 2.029383778 0.32173913 0.195652174 0.356521739 92 8 0 107 3L:8470756-8470887 8 Gug FBtr0076619|FBtr0076616|FBtr0333048|FBtr0305697|FBtr0305698|FBtr0305699|FBtr0076618|FBtr0305696 8470769|8470769|8470769|8470769|8470769|8470769|8470769|8470769 8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669 TGTGTTCA 8mer-A1 dme-miR-317-3p 3L + 8470784 8470875 3'utr Gug FlyBase G21793.1 AATTGTAGAGAGCAAGCAACTGAACAAAGACAATACTCGGGCCGCGGCCGTGAGGAACTGCTTTGTGTGATTTTTGTGTTCAAGCGTTTACA 45 8470857 0.962856331 9 40 254 0.873239437 1.792391689 0.169014085 0.444444444 0.647887324 45 9 0 62 3L:8470784-8470875 8 28 1596 FBgn0010825 1916.706667 26.53 40.64 0.014608391 1.055408971 0.688976378 1 1 1 0.25 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 8472551 8472557 + 3L_8472551_8472557_+ 0.648786764 0.687797536 0.66829215 0.027584731 Gug FBtr0305699|FBtr0076618|FBtr0305696|FBtr0305697|FBtr0305698|FBtr0076616|FBtr0333048|FBtr0333049|FBtr0076619 8470769|8470769|8470769|8470769|8470769|8470769|8470769|8471166|8470769 8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669 3L + 8472514 8472603 3'utr Gug FlyBase G28780.1 ATACAAAAAAAAACAAAACAAATGCAGCTATATTATTGCAGCTATATTACTAAATAAATTATAAAACAAAAAGATCATACTGAAAAGATA 154 8472549 0.983698849 13 143 1111 0.935483871 2.240549248 0.02688172 0.142857143 0.290322581 154 12 0 174 3L:8472514-8472603 7 Gug FBtr0333049|FBtr0076619|FBtr0076616|FBtr0333048|FBtr0305697|FBtr0305698|FBtr0305699|FBtr0076618|FBtr0305696 8471166|8470769|8470769|8470769|8470769|8470769|8470769|8470769|8470769 8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669 GCAGCTA 7mer-A1 dme-miR-980-3p 3L + 8472502 8472606 3'utr Gug FlyBase G21800.1 ATTTATATATATATACAAAAAAAAACAAAACAAATGCAGCTATATTATTGCAGCTATATTACTAAATAAATTATAAAACAAAAAGATCATACTGAAAAGATAAAT 98 8472549 0.981530708 10 93 680 0.960264901 1.860338007 0.046357616 0.387755102 0.602649007 98 5 1 145 3L:8472502-8472606 7 76 1597 FBgn0010825 1916.706667 26.53 40.64 0.039651346 2.864681493 1.87007874 2 2 2 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 8533795 8533802 + 3L_8533795_8533802_+ 0.500119744 0.393859042 0.446989393 0.075137662 foi FBtr0331417|FBtr0345601|FBtr0331418|FBtr0076624 8533104|8533104|8533104|8533104 8533984|8534503|8533984|8533984 3L + 8533768 8533847 3'utr foi FlyBase G28805.1 TGTCCACCGCTGTTATGATTTTCTACAGTACTTAACGACTTGAACGCATATTTCCTCTTTCGGGAAATGTACACAAAACC 18 8533799 0.978441286 9 15 107 0.869565217 1.301029996 0.347826087 0.277777778 0.434782609 18 3 0 20 3L:8533768-8533847 8 foi FBtr0331418|FBtr0076624|FBtr0331417|FBtr0345601 8533104|8533104|8533104|8533104 8533984|8533984|8533984|8534503 GTACTTAA 8mer-A1 dme-miR-252-5p 3L + 8533772 8533836 3'utr foi FlyBase G21820.1 CACCGCTGTTATGATTTTCTACAGTACTTAACGACTTGAACGCATATTTCCTCTTTCGGGAAATG 15 8533799 0.975530423 6 15 96 1 1.342422681 0.272727273 0.333333333 0.545454545 15 0 0 22 3L:8533772-8533836 8 12.5 1598 FBgn0024236 2703.683333 97.23 149.9066667 0.004623323 0.128561144 0.083385217 -4 -4 -4 0.25 dme-miR-14-3p 6mer3-8 AAGACT 3L 8537247 8537252 + 3L_8537247_8537252_+ 0.868094404 0.793729294 0.830911849 0.052584066 ergic53 FBtr0301629|FBtr0076626 8537117|8537117 8537581|8538013 3L + 8537194 8537274 3'utr ergic53 FlyBase G28812.1 AGATTCGCACACCTGACTAGGCAGCAACTAAATTTAGTTAAAATGAAAGATTTAAGACTTCAGCGTAGCATGCTCTACCAT 278 8537245 0.823812781 14 260 1773 0.938271605 2.181843588 0.330246914 0.143884892 0.265432099 278 19 1 304 3L:8537194-8537274 6 ergic53 FBtr0076626|FBtr0301629 8537117|8537117 8538013|8537581 AAGACT 6mer3-8 dme-miR-14-3p 3L + 8537184 8537275 3'utr ergic53 FlyBase G21826.1 ACGAGGAAACAGATTCGCACACCTGACTAGGCAGCAACTAAATTTAGTTAAAATGAAAGATTTAAGACTTCAGCGTAGCATGCTCTACCATT 131 8537245 0.980179067 12 118 829 0.900990099 1.481920138 0.262376238 0.381679389 0.599009901 131 15 5 182 3L:8537184-8537275 6 194 1599 FBgn0035909 3502.546667 181.83 278.43 0.05538827 1.06693065 0.696763998 2 2 2 0.25 dme-bantam-3p 7mer-m8 TGATCTC 3L 8564459 8564465 + 3L_8564459_8564465_+ 0.522864183 0.549533423 0.536198803 0.018857972 rhea FBtr0333109 8564005 8574409 3L + 8564441 8564486 3'utr rhea FlyBase G28835.1 TTTGTGCAGTGCCTTCAGTGATCTCCTCAAGGCAGCCGAGCCAGAA 53 8564459 0.977387238 5 50 331 0.942028986 1.335792102 0.057971014 0.283018868 0.449275362 53 2 2 65 3L:8564441-8564486 7 rhea FBtr0333109 8564005 8574409 TGATCTC 7mer-m8 dme-bantam-3p 3L + 8564443 8564485 3'utr rhea FlyBase G21840.1 TGTGCAGTGCCTTCAGTGATCTCCTCAAGGCAGCCGAGCCAGA 30 8564459 0.973834817 5 30 184 1 1.643452676 0.022727273 0.266666667 0.5 30 0 0 44 3L:8564443-8564485 7 41.5 1600 FBgn0260442 4425.776667 56.13 85.46 0.009376885 0.739355069 0.485607302 0 0 0 0.25 dme-miR-980-3p 7mer-m8 GGCAGCT 3L 8564909 8564915 + 3L_8564909_8564915_+ 0.559485748 0.509209377 0.534347562 0.035550713 rhea FBtr0333109 8564005 8574409 3L + 8564882 8564936 3'utr rhea FlyBase G28837.1 TGATCCTAAGCTGAAGGCCGATCTCCTGGCAGCTGCTCGTGATGTGTCCAAGAGC 33 8564908 0.845735018 4 32 151 0.973684211 1.568201724 0.342105263 0.121212121 0.236842105 33 1 0 37 3L:8564882-8564936 7 rhea FBtr0333109 8564005 8574409 GGCAGCT 7mer-m8 dme-miR-980-3p 3L + 8564882 8564956 3'utr rhea FlyBase G21842.1 TGATCCTAAGCTGAAGGCCGATCTCCTGGCAGCTGCTCGTGATGTGTCCAAGAGCCTCACTGATATGTTGGAGCA 24 8564908 0.931830374 5 23 91 1 1.612783857 0.414634146 0.416666667 0.658536585 24 0 0 41 3L:8564882-8564956 7 27 1601 FBgn0260442 4425.776667 56.13 85.46 0.006100624 0.481026189 0.315937281 1 1 1 0.25 dme-miR-14-3p 6mer2-7 AGACTG 3L 8566049 8566054 + 3L_8566049_8566054_+ 0.787983496 0.979320099 0.883651798 0.135295407 rhea FBtr0333109 8564005 8574409 3L + 8566034 8566061 3'utr rhea FlyBase G28846.1 GAATCCAGCTATCATAGACTGTGCTGAT 14 8566048 0.739556424 3 11 78 0.866666667 1.113943352 0.066666667 0.071428571 0.133333333 14 2 0 13 3L:8566034-8566061 6 rhea FBtr0333109 8564005 8574409 AGACTG 6mer2-7 dme-miR-14-3p 3L + 8566035 8566063 3'utr rhea FlyBase G21847.1 AATCCAGCTATCATAGACTGTGCTGATGA 7 8566048 0.703734284 4 7 39 1 0.954242509 0.222222222 0.142857143 0.333333333 7 0 0 9 3L:8566035-8566063 6 10.5 1602 FBgn0260442 4425.776667 56.13 85.46 0.002372465 0.18706574 0.122864498 1 1 1 0.25 dme-miR-184-3p 7mer-A1 CCGTCCA 3L 8566280 8566286 + 3L_8566280_8566286_+ 0.601872916 0.699780242 0.650826579 0.069230916 rhea FBtr0333109 8564005 8574409 3L + 8566256 8566300 3'utr rhea FlyBase G28847.1 AATGAGTGAATTCCCACCTTCAAGCCGTCCATATGCCACTCTGCA 36 8566287 0.710957753 6 35 215 0.975609756 1.602059991 0.195121951 0.111111111 0.219512195 36 1 0 40 3L:8566256-8566300 7 rhea FBtr0333109 8564005 8574409 CCGTCCA 7mer-A1 dme-miR-184-3p 3L + 8566259 8566303 3'utr rhea FlyBase G21848.1 GAGTGAATTCCCACCTTCAAGCCGTCCATATGCCACTCTGCAATC 8 8566287 0.951168645 2 7 38 1 1 0.6 0.25 0.4 8 0 0 10 3L:8566259-8566303 7 21 1603 FBgn0260442 4425.776667 56.13 85.46 0.00474493 0.37413148 0.245728996 -7 -7 -7 0.25 dme-miR-1007-3p 7mer-A1 GAGCTTA 3L 8567694 8567700 + 3L_8567694_8567700_+ 0.823264474 0.823342362 0.823303418 5.51E-05 rhea FBtr0333109 8564005 8574409 3L + 8567667 8567706 3'utr rhea FlyBase G28853.1 AGTGGCCAGACGATGAACTCTGCTTCCGAGCTTATTGACA 6 8567701 0.815675635 5 5 43 0.833333333 0.698970004 0.166666667 0 0 6 1 0 5 3L:8567667-8567706 7 rhea FBtr0333109 8564005 8574409 GAGCTTA 7mer-A1 dme-miR-1007-3p 3L + 8567652 8567711 3'utr rhea FlyBase G21851.1 AACTTGCATGGATTCAGTGGCCAGACGATGAACTCTGCTTCCGAGCTTATTGACAAACTG 5 8567690 0.972506348 4 5 31 1 0.84509804 0.285714286 0.2 0.428571429 5 0 0 7 3L:8567652-8567711 7 4 1604 FBgn0260442 4425.776667 56.13 85.46 0.000903796 0.071263139 0.046805523 -7 4 -1.5 0.25 dme-miR-14-3p 7mer-m8 AAGACTG 3L 8570998 8571004 + 3L_8570998_8571004_+ 0.666809704 0.65297459 0.659892147 0.009782893 rhea FBtr0333109 8564005 8574409 3L + 8570981 8571069 3'utr rhea FlyBase G28858.1 ATGTGTCCTCACTACTAAAGACTGTGAAGGCTGTCGAGGATGAGCACACTCGCGGAACTCGTGCAATGGAGGCCACCGTAGAAGCCATC 31 8571005 0.988873903 4 29 166 0.944444444 1.230448921 0.472222222 0.161290323 0.277777778 31 1 1 34 3L:8570981-8571069 7 rhea FBtr0333109 8564005 8574409 AAGACTG 7mer-m8 dme-miR-14-3p 3L + 8570983 8571046 3'utr rhea FlyBase G21854.1 GTGTCCTCACTACTAAAGACTGTGAAGGCTGTCGAGGATGAGCACACTCGCGGAACTCGTGCAA 11 8571005 0.971328084 5 9 55 0.952380952 1.301029996 0.476190476 0.636363636 0.80952381 11 1 0 20 3L:8570983-8571046 7 17.5 1605 FBgn0260442 4425.776667 56.13 85.46 0.003954108 0.311776234 0.204774163 -7 -7 -7 0.25 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 8574024 8574030 + 3L_8574024_8574030_+ 0.661289485 0.654873389 0.658081437 0.004536868 rhea FBtr0333109|FBtr0333108|FBtr0333106|FBtr0333107|FBtr0333105|FBtr0305210 8564005|8573788|8573788|8573788|8573788|8573788 8574409|8574409|8574409|8574409|8574409|8574409 3L + 8573997 8574046 3'utr rhea FlyBase G28873.1 AATCAAGTTTCAATGTTTTCGTATATCTGTGTTCTACGTGTTTATTTGCC 11 8574022 0.992622032 5 9 121 0.916666667 1.041392685 0.083333333 0.090909091 0.166666667 11 1 0 11 3L:8573997-8574046 7 rhea FBtr0333105|FBtr0305210|FBtr0333109|FBtr0333108|FBtr0333106|FBtr0333107 8573788|8573788|8564005|8573788|8573788|8573788 8574409|8574409|8574409|8574409|8574409|8574409 TGTGTTC 7mer-m8 dme-miR-317-3p 3L + 8574008 8574070 3'utr rhea FlyBase G21864.1 AATGTTTTCGTATATCTGTGTTCTACGTGTTTATTTGCCATTAAATTGCCCATATATATTTAT 13 8574022 0.991195885 7 13 138 1 1.322219295 0.19047619 0.384615385 0.619047619 13 0 0 21 3L:8574008-8574070 7 8.5 1606 FBgn0260442 4425.776667 56.13 85.46 0.001920567 0.151434171 0.099461736 2 2 2 0.25 dme-miR-305-3p 7mer-m8 ATGTGCC 3L 8574434 8574440 - 3L_8574434_8574440_- 0.666633518 0.612251504 0.639442511 0.038453881 CG6638 FBtr0076651 8574405 8574574 3L - 8574419 8574451 3'utr CG6638 FlyBase G35451.1 TATGTATATGTATGTGCCTTAATAAAAGAAGTA 8 8574438 0.880945592 5 8 67 1 1 0.1 0.25 0.4 8 0 0 10 3L:8574419-8574451 7 CG6638 FBtr0076651 8574405 8574574 ATGTGCC 7mer-m8 dme-miR-305-3p 3L - 8574417 8574446 3'utr CG6638 FlyBase G26825.1 ATATGTATGTGCCTTAATAAAAGAAGTAAA 6 8574438 0.698774397 3 6 39 1 0.954242509 0 0.5 0.666666667 6 0 0 9 3L:8574417-8574446 7 7 1607 FBgn0035911 221 17.94666667 27.59333333 0.031674208 0.390044577 0.253684465 -2 -2 -2 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA 3L 8574495 8574502 - 3L_8574495_8574502_- 0.593819991 0.577369005 0.585594498 0.011632614 CG6638 FBtr0076651 8574405 8574574 3L - 8574483 8574563 3'utr CG6638 FlyBase G35452.1 CATCTCTTTTTCCAATGTGGCAATAACGTGGACCAACTCTACTACCTGACAGACTAAATGTTGCATTTATTTTTTGAAGAT 41 8574504 0.885115464 12 37 318 0.916666667 1.643452676 0.125 0.170731707 0.291666667 41 4 0 44 3L:8574483-8574563 8 CG6638 FBtr0076651 8574405 8574574 TGCATTTA 8mer-A1 dme-miR-277-3p 3L - 8574485 8574536 3'utr CG6638 FlyBase G26826.1 GTGGACCAACTCTACTACCTGACAGACTAAATGTTGCATTTATTTTTTGAAG 14 8574503 0.849276496 5 13 125 0.909090909 1.301029996 0.318181818 0.5 0.681818182 14 2 0 20 3L:8574485-8574536 8 17 1608 FBgn0035911 221 17.94666667 27.59333333 0.076923077 0.947251114 0.616090843 2 1 1.5 0.25 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 8678483 8678490 + 3L_8678483_8678490_+ 0.642564647 0.642595742 0.642580194 2.20E-05 h FBtr0100153|FBtr0076569 8678422|8678422 8679253|8679253 3L + 8678265 8678585 stop_codon h FlyBase G28893.1 AGCTGTAGCTACGCCCCGCCCAGTCCGGCCAACTCTAGCTACGAGCCCATGGACATCAAGCCATCGGTCATCCAGCGCGTGCCAATGGAGCAGCAGCCCCTGTCGCTGGTGATCAAGAAGCAGATCAAGGAGGAGGAGCAGCCCTGGCGGCCCTGGTAGAGGGTGTCTGCATATGCATATCATATAGCATAGCCACCCCTATCGAATCTCCCGCTTTTAAGACTGACCCCCCACAACTCATCCAACTCGCACACATGCGCAGGCGTTGTGCGCATGCGCGTAGACATTTCACATCATTCGCCGGGATTGCGCAAATGTTGC 1311 8678481 0.94834906 48 1139 6193 0.867421719 1.596097044 0.113257828 0.118230359 0.229846769 1311 167 32 1302 3L:8678265-8678585 8 h FBtr0076569|FBtr0100153 8678422|8678422 8679253|8679253 AAGACTGA 8mer-A1 dme-miR-14-3p 3L + 8678259 8678596 stop_codon h FlyBase G21885.1 AGCAGCAGCTGTAGCTACGCCCCGCCCAGTCCGGCCAACTCTAGCTACGAGCCCATGGACATCAAGCCATCGGTCATCCAGCGCGTGCCAATGGAGCAGCAGCCCCTGTCGCTGGTGATCAAGAAGCAGATCAAGGAGGAGGAGCAGCCCTGGCGGCCCTGGTAGAGGGTGTCTGCATATGCATATCATATAGCATAGCCACCCCTATCGAATCTCCCGCTTTTAAGACTGACCCCCCACAACTCATCCAACTCGCACACATGCGCAGGCGTTGTGCGCATGCGCGTAGACATTTCACATCATTCGCCGGGATTGCGCAAATGTTGCTTTGAAGTGTT 885 8678481 0.928873114 47 731 4117 0.827932099 1.729569726 0.143518519 0.340112994 0.549382716 885 204 19 1073 3L:8678259-8678596 8 715 1609 FBgn0001168 3068.926667 171.7433333 259.7866667 0.232980477 4.163189255 2.752258263 2 2 2 0.25 dme-bantam-3p 6mer3-8 TGATCT 3L 8725790 8725795 + 3L_8725790_8725795_+ 0.993596047 0.914545709 0.954070878 0.055897003 CG6511 FBtr0333887|FBtr0076570 8725510|8725510 8726108|8726108 3L + 8725764 8725865 3'utr CG6511 FlyBase G28919.1 TTTGTAAGCGTTTGGAGACAGTTTTCTGATCTTGTCATCGGCAGCTCGGCTCTTATAAAGTCTGAGGGCCCTGGCCCAAACGTGTCGTTTATCTAGATTAGC 30 8725790 0.808227039 13 28 236 0.921052632 1.544068044 0.131578947 0.233333333 0.394736842 30 3 0 35 3L:8725764-8725865 6 CG6511 FBtr0333887|FBtr0076570 8725510|8725510 8726108|8726108 TGATCT 6mer3-8 dme-bantam-3p 3L + 8725770 8725841 3'utr CG6511 FlyBase G21903.1 AGCGTTTGGAGACAGTTTTCTGATCTTGTCATCGGCAGCTCGGCTCTTATAAAGTCTGAGGGCCCTGGCCCA 23 8725790 0.675211494 8 16 169 0.717948718 1.447158031 0.205128205 0.652173913 0.794871795 23 11 0 28 3L:8725770-8725841 6 15 1610 FBgn0035923 413.53 11.23333333 17.25666667 0.036273064 1.335311573 0.869229283 0 0 0 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3L 8890906 8890912 + 3L_8890906_8890912_+ 0.433468424 0.424038648 0.428753536 0.006667876 dally FBtr0305901 8889317 8891192 3L + 8890877 8890932 3'utr dally FlyBase G28925.1 ATTTGTATCATTATTATTTAACTATTGCATGTGATTAATAATATTTAAGTTAAACG 47 8890902 0.785910368 5 43 526 0.921568627 1.371067862 0.058823529 0.042553191 0.117647059 47 3 1 47 3L:8890877-8890932 7 dally FBtr0305901 8889317 8891192 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 8890886 8890930 3'utr dally FlyBase G21910.1 ATTATTATTTAACTATTGCATGTGATTAATAATATTTAAGTTAAA 22 8890902 0.769376841 4 18 236 0.842105263 1.505149978 0 0.454545455 0.684210526 22 6 0 32 3L:8890886-8890930 7 33.5 1611 FBgn0263930 612.92 16.66666667 25.74 0.054656399 2.01 1.301476301 4 4 4 0.25 dme-miR-986-5p 7mer-m8 ATTCGAG 3L 892325 892331 + 3L_892325_892331_+ 0.663752872 0.635998021 0.649875446 0.019625678 CG32479 FBtr0333267|FBtr0333266|FBtr0072589 892174|892174|892174 895313|893520|893520 3L + 892275 892357 3'utr CG32479 FlyBase G26957.1 GCGAGTTTGGTTTTATATGCATATACATATACAAATTAACAATTAGATATATTCGAGCGGTATATAGTTAAGCCCAAAGTCCA 15 892323 0.72800944 11 13 104 0.894736842 0.929418926 0.105263158 0.133333333 0.315789474 15 1 1 17 3L:892275-892357 7 CG32479 FBtr0072589|FBtr0333266|FBtr0333267 892174|892174|892174 893520|893520|895313 ATTCGAG 7mer-m8 dme-miR-986-5p 3L + 892267 892343 3'utr CG32479 FlyBase G20405.1 GCGAGAATGCGAGTTTGGTTTTATATGCATATACATATACAAATTAACAATTAGATATATTCGAGCGGTATATAGTT 9 892310 0.987675896 6 7 73 0.857142857 1.079181246 0.142857143 0.333333333 0.571428571 9 2 0 12 3L:892267-892343 7 6 1612 FBgn0052479 4815.663333 78.18666667 119.8133333 0.001245934 0.076739427 0.050077899 2 15 8.5 0.25 dme-miR-305-5p 7mer-A1 GTACAAA 3L 892480 892486 + 3L_892480_892486_+ 0.726420006 0.729973566 0.728196786 0.002512775 CG32479 FBtr0333267|FBtr0333266|FBtr0072589 892174|892174|892174 895313|893520|893520 3L + 892425 892521 3'utr CG32479 FlyBase G26958.2 TTAAGGTTGAGTAGAAAAATAGGCAGCAAAAGAAACTCGTTGGAACGAAAACTTTGTACAAAGAGAAACGAAAGAACTCTGTAAACTAAACAGCGAG 313 892478 0.989908944 14 307 1020 0.98944591 1.971971276 0.319261214 0.166134185 0.311345646 313 1 3 375 3L:892425-892521 7 CG32479 FBtr0072589|FBtr0333266|FBtr0333267 892174|892174|892174 893520|893520|895313 GTACAAA 7mer-A1 dme-miR-305-5p 3L + 892416 892521 3'utr CG32479 FlyBase G20406.2 AGACTAGAATTAAGGTTGAGTAGAAAAATAGGCAGCAAAAGAAACTCGTTGGAACGAAAACTTTGTACAAAGAGAAACGAAAGAACTCTGTAAACTAAACAGCGAG 243 892478 0.940600746 14 238 821 0.983002833 2.06320822 0.348441926 0.33744856 0.543909348 243 4 2 347 3L:892416-892521 7 201.5 1613 FBgn0052479 4815.663333 78.18666667 119.8133333 0.041842626 2.577165757 1.681782773 2 2 2 0.25 dme-miR-986-5p 7mer-m8 ATTCGAG 3L 893255 893261 + 3L_893255_893261_+ 0.472104045 0.451370401 0.461737223 0.014660869 CG32479 FBtr0333267|FBtr0333266|FBtr0072589 892174|892174|892174 895313|893520|893520 3L + 893214 893307 3'utr CG32479 FlyBase G26962.1 GATTGTCTCCCCGGCTTGGATGCGATGTTTGCCTTCATGATATTCGAGTCCTTAACTTTCTTTTCTCAGACCTAGAGCATTTAGTTTGTACATC 37 893256 0.989470011 10 36 349 0.955555556 1.633468456 0.044444444 0.162162162 0.311111111 37 2 0 43 3L:893214-893307 7 CG32479 FBtr0072589|FBtr0333266|FBtr0333267 892174|892174|892174 893520|893520|895313 ATTCGAG 7mer-m8 dme-miR-986-5p 3L + 893217 893276 3'utr CG32479 FlyBase G20411.1 TGTCTCCCCGGCTTGGATGCGATGTTTGCCTTCATGATATTCGAGTCCTTAACTTTCTTT 28 893255 0.759927122 7 26 255 0.961538462 1.397940009 0.038461538 0.5 0.730769231 28 1 1 50 3L:893217-893276 7 28 1614 FBgn0052479 4815.663333 78.18666667 119.8133333 0.00581436 0.358117326 0.233696862 -1 0 -0.5 0.25 dme-bantam-3p 6mer2-7 GATCTC 3L 8932914 8932919 - 3L_8932914_8932919_- 0.979419864 0.967787012 0.973603438 0.008225702 CG43783 FBtr0331518|FBtr0331519|FBtr0331516|FBtr0331517 8932233|8932233|8932233|8932233 8933062|8933062|8933062|8933062 3L - 8932890 8932938 5'utr-coding CG43783 FlyBase G35494.1 AAGCTTAGATTAAATTTTCGATCTCCAGTTCCGGTTTCGAATACTTAAT 19 8932923 0.985993081 6 18 186 0.954545455 1.021189299 0.045454545 0.157894737 0.272727273 19 0 1 21 3L:8932890-8932938 6 CG43783 FBtr0331517|FBtr0331516|FBtr0331519|FBtr0331518 8932233|8932233|8932233|8932233 8933062|8933062|8933062|8933062 GATCTC 6mer2-7 dme-bantam-3p 3L - 8932897 8932937 5'utr-coding CG43783 FlyBase G26856.1 AGCTTAGATTAAATTTTCGATCTCCAGTTCCGGTTTCGAAT 14 8932923 0.686548543 5 11 136 0.8 1.204119983 0 0.357142857 0.55 14 4 0 16 3L:8932897-8932937 6 16 1615 FBgn0264305 845.6866667 21.05333333 32.24666667 0.018919537 0.759974668 0.496175315 4 4 4 0.25 dme-miR-263a-5p 6mer3-8 GTGCCA 3L 893491 893496 + 3L_893491_893496_+ 0.999998946 0.998807853 0.999403399 0.000842164 CG32479 FBtr0333267|FBtr0333266|FBtr0072589 892174|892174|892174 895313|893520|893520 3L + 893469 893526 3'utr-intron CG32479 FlyBase G26964.1 ATATATATTATTTATAGATATCGTGCCAATGTTAAAACATCTAAAAATTTTCAAAAAA 12 893499 0.708699866 8 12 106 1 1.079181246 0.166666667 0 0 12 0 0 12 3L:893469-893526 6 CG32479 FBtr0072589|FBtr0333266|FBtr0333267 892174|892174|892174 893520|893520|895313 GTGCCA 6mer3-8 dme-miR-263a-5p 3L + 893473 893518 3'utr CG32479 FlyBase G20413.1 ATATTATTTATAGATATCGTGCCAATGTTAAAACATCTAAAAATTT 11 893492 0.771565008 4 10 87 0.9375 1.176091259 0 0.363636364 0.5625 11 1 0 15 3L:893473-893518 6 10.5 1616 FBgn0052479 4815.663333 78.18666667 119.8133333 0.002180385 0.134293997 0.087636323 -8 -1 -4.5 0.25 dme-miR-79-3p 7mer-A1 AGCTTTA 3L 8939394 8939400 - 3L_8939394_8939400_- 0.823266697 0.823320835 0.823293766 3.83E-05 orb2 FBtr0331515|FBtr0331514 8937098|8939063 8942890|8942890 3L - 8939376 8939411 3'utr orb2 FlyBase G35506.1 GTCGGATTGACAGCTTTAGTTTTATAGAGAATCTTG 12 8939395 0.870360101 5 12 109 1 1.204119983 0.25 0.25 0.4375 12 0 0 16 3L:8939376-8939411 7 orb2 FBtr0331515|FBtr0331514 8937098|8939063 8942890|8942890 AGCTTTA 7mer-A1 dme-miR-79-3p 3L - 8939380 8939410 3'utr orb2 FlyBase G26863.1 TCGGATTGACAGCTTTAGTTTTATAGAGAAT 5 8939396 0.78121999 2 4 47 0.769230769 1 0.230769231 0.8 0.923076923 5 3 0 10 3L:8939380-8939410 7 8.5 1617 FBgn0264307 292.6133333 6.573333333 10.15 0.029048574 1.293103448 0.837438424 -5 -4 -4.5 0.25 dme-miR-8-3p 8mer-A1 CAGTATTA 3L 8941261 8941268 - 3L_8941261_8941268_- 0.514974838 0.495003795 0.504989316 0.01412163 orb2 FBtr0331515|FBtr0331514 8937098|8939063 8942890|8942890 3L - 8941247 8941294 3'utr orb2 FlyBase G35508.1 AACAAAACAGTCAAATTGCTTGTGTTCAGTATTATGATTTATTTATGA 48 8941273 0.617789618 7 48 460 1 1.77815125 0.233333333 0.1875 0.35 48 0 0 60 3L:8941247-8941294 8 orb2 FBtr0331515|FBtr0331514 8937098|8939063 8942890|8942890 CAGTATTA 8mer-A1 dme-miR-8-3p 3L - 8941249 8941290 3'utr orb2 FlyBase G26865.1 AAACAGTCAAATTGCTTGTGTTCAGTATTATGATTTATTTAT 40 8941274 0.659603857 5 38 390 0.962962963 1.716003344 0.203703704 0.275 0.462962963 40 2 0 52 3L:8941249-8941290 8 44 1618 FBgn0264307 292.6133333 6.573333333 10.15 0.150369088 6.693711968 4.334975369 5 6 5.5 0.25 dme-miR-277-3p 7mer-m8 TGCATTT 3L 8941368 8941374 - 3L_8941368_8941374_- 0.609252648 0.609027669 0.609140159 0.000159028 orb2 FBtr0331515|FBtr0331513|FBtr0331514 8937098|8941311|8939063 8942890|8942890|8942890 3L - 8941350 8941402 3'utr orb2 FlyBase G35509.1 AACAACACATTTACACTGAAAGTCTGTTTGCATTTGTTGCCATTTGGCTTAAT 14 8941375 0.870932845 5 13 118 0.941176471 1.204119983 0.176470588 0.214285714 0.352941176 14 1 0 16 3L:8941350-8941402 7 orb2 FBtr0331515|FBtr0331513|FBtr0331514 8937098|8941311|8939063 8942890|8942890|8942890 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 8941350 8941402 3'utr orb2 FlyBase G26866.1 AACAACACATTTACACTGAAAGTCTGTTTGCATTTGTTGCCATTTGGCTTAAT 11 8941375 0.858351224 5 11 102 1 1.176091259 0.066666667 0.272727273 0.466666667 11 0 0 15 3L:8941350-8941402 7 9.5 1619 FBgn0264307 292.6133333 6.573333333 10.15 0.032466053 1.445233266 0.935960591 1 1 1 0.25 dme-miR-282-5p 7mer-A1 GAGGCTA 3L 8942186 8942192 - 3L_8942186_8942192_- 0.796506574 0.786965264 0.791735919 0.006746718 orb2 FBtr0331515|FBtr0331513|FBtr0331514 8937098|8941311|8939063 8942890|8942890|8942890 3L - 8942147 8942205 3'utr orb2 FlyBase G35513.1 TTGTATGCCAATCGAGGCTAGTCCTAAAATTATTAGTGAGCTGCTCACCCTCTCTCGAA 12 8942195 0.971319829 5 10 65 0.823529412 1.146128036 0.235294118 0.333333333 0.529411765 12 3 0 14 3L:8942147-8942205 7 orb2 FBtr0331515|FBtr0331513|FBtr0331514 8937098|8941311|8939063 8942890|8942890|8942890 GAGGCTA 7mer-A1 dme-miR-282-5p 3L - 8942133 8942208 3'utr orb2 FlyBase G26867.1 ATCTTGTATGCCAATCGAGGCTAGTCCTAAAATTATTAGTGAGCTGCTCACCCTCTCTCGAAAAGGCTTTTTGCTT 10 8942181 0.974224651 7 10 63 1 1.113943352 0.153846154 0.3 0.461538462 10 0 0 13 3L:8942133-8942208 7 8 1620 FBgn0264307 292.6133333 6.573333333 10.15 0.027339834 1.21703854 0.78817734 3 -11 -4 0.25 dme-miR-252-5p 6mer3-8 GTACTT 3L 8942359 8942364 - 3L_8942359_8942364_- 0.786216697 0.710722807 0.748469752 0.053382249 orb2 FBtr0331515|FBtr0331513|FBtr0331514|FBtr0331512 8937098|8941311|8939063|8942309 8942890|8942890|8942890|8942890 3L - 8942343 8942392 3'utr orb2 FlyBase G35515.1 TGCGTTCGATGCCTGCACAGTATTTTTTGTACTTTATATTTTTAGCAACA 24 8942368 0.989622435 8 20 181 0.935483871 1.462397998 0.258064516 0.208333333 0.387096774 24 2 0 29 3L:8942343-8942392 6 orb2 FBtr0331515|FBtr0331513|FBtr0331514|FBtr0331512 8937098|8941311|8939063|8942309 8942890|8942890|8942890|8942890 GTACTT 6mer3-8 dme-miR-252-5p 3L - 8942362 8942397 3'utr orb2 FlyBase G26869.1 GATTTTGCGTTCGATGCCTGCACAGTATTTTTTGTA 20 8942367 0.643246597 7 19 190 0.933333333 1.447158031 0.1 0.4 0.6 20 2 0 28 3L:8942362-8942397 2 14 1621 FBgn0264307 292.6133333 6.573333333 10.15 0.04784471 2.129817444 1.379310345 4 3 3.5 0.25 dme-miR-1008-3p 6mer2-7 GCTGTG 3L 894753 894758 + 3L_894753_894758_+ 0.99991635 0.999295894 0.999606122 0.000438689 CG32479 FBtr0333267 892174 895313 3L + 894685 894776 3'utr CG32479 FlyBase G26971.1 TTGTAATACCCAAGTCACATTCTGTTGTCCCCGATTAATGTATGTTTTAGTTTTAAGTAGTTTCTAAGGCTGTGTAACTAACTAACATAAGT 49 894746 0.98993941 14 45 542 0.927272727 1.707570176 0.036363636 0.102040816 0.2 49 4 0 51 3L:894685-894776 6 CG32479 FBtr0333267 892174 895313 GCTGTG 6mer2-7 dme-miR-1008-3p 3L + 894689 894776 3'utr CG32479 FlyBase G20419.1 AATACCCAAGTCACATTCTGTTGTCCCCGATTAATGTATGTTTTAGTTTTAAGTAGTTTCTAAGGCTGTGTAACTAACTAACATAAGT 42 894747 0.993944659 14 35 451 0.852459016 1.414973348 0.081967213 0.357142857 0.557377049 42 8 1 52 3L:894689-894776 6 40.5 1622 FBgn0052479 4815.663333 78.18666667 119.8133333 0.008410056 0.517991132 0.338025818 7 6 6.5 0.25 dme-miR-14-3p 7mer-m8 AAGACTG 3L 8961313 8961319 - 3L_8961313_8961319_- 0.669478698 0.668881877 0.669180287 0.000422001 CG5660 FBtr0346542|FBtr0076560 8961272|8961272 8961399|8961399 3L - 8961298 8961336 3'utr CG5660 FlyBase G35523.1 CTGTTTGTTTAGAATTAAAGACTGCAATATTTATTAAAT 14 8961322 0.755189438 5 14 114 1 1.176091259 0.133333333 0.071428571 0.133333333 14 0 0 15 3L:8961298-8961336 7 CG5660 FBtr0346542|FBtr0076560 8961272|8961272 8961399|8961399 AAGACTG 7mer-m8 dme-miR-14-3p 3L - 8961298 8961330 3'utr CG5660 FlyBase G26875.1 GTTTAGAATTAAAGACTGCAATATTTATTAAAT 8 8961322 0.73731544 5 8 54 1 1.041392685 0.272727273 0.375 0.545454545 8 0 0 11 3L:8961298-8961330 7 11 1623 FBgn0035942 106.3333333 4.03 6.186666667 0.103448276 2.729528536 1.778017241 3 3 3 0.25 dme-miR-8-3p 7mer-A1 AGTATTA 3L 8971682 8971688 + 3L_8971682_8971688_+ 0.80774078 0.823294635 0.815517707 0.010998197 CG5026 FBtr0076516 8971179 8971752 3L + 8971584 8971694 3'utr CG5026 FlyBase G28965.1 TTTTATGGAATTTTTAGCGTATAAGTCTCCAAAATTACCTATTTATAGTACTTACTTGTGTCAGTTATTTAGTGGTCAACAAGCCACAGATCAAATTAAGTATTATAAACT 9 8971680 0.984019702 6 9 78 1 0.954242509 0 0 0 9 0 0 9 3L:8971584-8971694 7 CG5026 FBtr0076516 8971179 8971752 AGTATTA 7mer-A1 dme-miR-8-3p 3L + 8971661 8971697 3'utr CG5026 FlyBase G21935.1 AACAAGCCACAGATCAAATTAAGTATTATAAACTCAA 5 8971680 0.976598387 3 5 34 1 0.698970004 0 0 0 5 0 0 5 3L:8971661-8971697 7 4.5 1624 FBgn0035945 330 15.41 23.52 0.013636364 0.29201817 0.191326531 2 2 2 0.25 dme-miR-252-5p 6mer3-8 GTACTT 3L 8972165 8972170 - 3L_8972165_8972170_- 0.96376005 0.921568047 0.942664049 0.02983432 pix FBtr0076557|FBtr0076558 8972054|8972054 8972332|8972332 3L - 8972145 8972256 3'utr pix FlyBase G35527.1 TTCTTTCGTTGAAGAACACATTTGCTTTCAAATTAATTTGTTATTGTTGTCGAGGATTGCGTACAATCGAAAATTGGGGATTAATTGTACTTGATTAAAGTGAGTTTTATAT 32 8972171 0.769394638 12 30 265 0.972222222 1.243038049 0.361111111 0.125 0.222222222 32 0 1 35 3L:8972145-8972256 6 pix FBtr0076557|FBtr0076558 8972054|8972054 8972332|8972332 GTACTT 6mer3-8 dme-miR-252-5p 3L - 8972143 8972196 3'utr pix FlyBase G26878.1 GTACAATCGAAAATTGGGGATTAATTGTACTTGATTAAAGTGAGTTTTATATAC 21 8972171 0.980609178 6 20 182 1 1.447158031 0.464285714 0.238095238 0.428571429 21 0 0 28 3L:8972143-8972196 6 21 1625 FBgn0086706 1403.55 77.59666667 118.19 0.01496206 0.270630182 0.177680007 1 1 1 0.25 dme-miR-932-5p 8mer-A1 GGAATTGA 3L 8991290 8991297 - 3L_8991290_8991297_- 0.579743974 0.672963064 0.626353519 0.065915858 smg FBtr0076550|FBtr0076551|FBtr0076549|FBtr0290103|FBtr0290104 8990315|8990315|8990315|8990315|8990315 8991495|8991495|8991495|8992080|8991495 3L - 8991255 8991320 3'utr smg FlyBase G35552.1 AAGGAAGAAAGCTGGATGGAGAGGGAATTGAAAAGTGAGAATTGAGAAACGAGAGCTGATAATTGT 18 8991293 0.867540953 7 16 63 0.909090909 1 0.045454545 0.166666667 0.318181818 18 1 1 20 3L:8991255-8991320 8 smg FBtr0290104|FBtr0076549|FBtr0290103|FBtr0076550|FBtr0076551 8990315|8990315|8990315|8990315|8990315 8991495|8991495|8992080|8991495|8991495 GGAATTGA 8mer-A1 dme-miR-932-5p 3L - 8991278 8991320 3'utr smg FlyBase G26899.1 AAGGAAGAAAGCTGGATGGAGAGGGAATTGAAAAGTGAGAATT 6 8991293 0.856498459 3 6 16 1 1.113943352 0 0.666666667 0.846153846 6 0 0 13 3L:8991278-8991320 8 10 1626 FBgn0016070 840.7666667 21.58333333 33.01666667 0.011893906 0.463320463 0.302877335 -4 -4 -4 0.25 dme-miR-14-3p 7mer-A1 AGACTGA 3L 8991353 8991359 - 3L_8991353_8991359_- 0.511556655 0.576326158 0.543941407 0.045798953 smg FBtr0076550|FBtr0076551|FBtr0076549|FBtr0290103|FBtr0290104 8990315|8990315|8990315|8990315|8990315 8991495|8991495|8991495|8992080|8991495 3L - 8991331 8991386 3'utr smg FlyBase G35553.1 TAAAATGAACTCTGCATCGTGACCATGAGACTGACTAAGATTACTTTTCGCAACTA 934 8991361 0.948247331 10 919 6276 0.98394712 2.540746464 0.271010387 0.124197002 0.227573182 934 15 2 1042 3L:8991331-8991386 7 smg FBtr0290104|FBtr0076549|FBtr0290103|FBtr0076550|FBtr0076551 8990315|8990315|8990315|8990315|8990315 8991495|8991495|8992080|8991495|8991495 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 8991332 8991384 3'utr smg FlyBase G26900.1 AAATGAACTCTGCATCGTGACCATGAGACTGACTAAGATTACTTTTCGCAACT 481 8991361 0.932388816 7 466 3020 0.973262032 2.862131379 0.279411765 0.376299376 0.598930481 481 20 0 728 3L:8991332-8991384 7 702.5 1627 FBgn0016070 840.7666667 21.58333333 33.01666667 0.835546921 32.54826255 21.27713276 2 2 2 0.25 dme-miR-1008-3p 8mer-A1 AGCTGTGA 3L 9002317 9002324 + 3L_9002317_9002324_+ 0.462223955 0.43492636 0.448575157 0.019302318 CG5087 FBtr0076520|FBtr0333908 9002128|9002128 9002566|9002566 3L + 9002293 9002344 3'utr CG5087 FlyBase G28992.1 ATTAAGAAGTAAACATAAACGTATAGCTGTGATAAAACTATAATAAACTAAC 156 9002316 0.768287288 6 145 932 0.932960894 1.921686475 0.005586592 0.128205128 0.240223464 156 11 1 167 3L:9002293-9002344 8 CG5087 FBtr0076520|FBtr0333908 9002128|9002128 9002566|9002566 AGCTGTGA 8mer-A1 dme-miR-1008-3p 3L + 9002296 9002342 3'utr CG5087 FlyBase G21949.1 AAGAAGTAAACATAAACGTATAGCTGTGATAAAACTATAATAAACTA 90 9002316 0.721167928 8 79 520 0.893129771 1.591064607 0.007633588 0.322222222 0.534351145 90 12 2 117 3L:9002296-9002342 8 123 1628 FBgn0035953 365.8866667 11.12666667 17.00666667 0.33616967 11.05452367 7.23245786 1 1 1 0.25 dme-miR-1008-3p 8mer-A1 AGCTGTGA 3L 9067849 9067856 - 3L_9067849_9067856_- 0.407554791 0.42664317 0.41709898 0.013497537 CG4911 FBtr0345351 9067193 9070515 3L - 9067834 9067884 3'utr CG4911 FlyBase G35572.1 TAAAAGTTATAAGAGCAAAAGTGAAGAAAGCTGTGATACAACAAGATCCAA 13 9067863 0.920346242 5 11 38 0.941176471 1.204119983 0.117647059 0.230769231 0.411764706 13 1 0 16 3L:9067834-9067884 8 CG4911 FBtr0345351 9067193 9070515 AGCTGTGA 8mer-A1 dme-miR-1008-3p 3L - 9067843 9067899 3'utr CG4911 FlyBase G26917.1 TATGCAAGTTATGCTTAAAAGTTATAAGAGCAAAAGTGAAGAAAGCTGTGATACAAC 10 9067853 0.957703963 4 8 39 0.733333333 0.740362689 0.066666667 0.4 0.6 10 3 1 11 3L:9067843-9067899 8 8 1629 FBgn0035959 1732.163333 43.72333333 67.07666667 0.004618502 0.182968667 0.119266511 7 -3 2 0.25 dme-miR-92b-3p 7mer-A1 TGCAATA 3L 9069042 9069048 - 3L_9069042_9069048_- 0.782814019 0.606589347 0.694701683 0.12460968 CG4911 FBtr0345351 9067193 9070515 3L - 9069027 9069073 3'utr CG4911 FlyBase G35580.1 ATGCATGTAATCATTTTTTATGAACTGCAATAGCAAATATTATTTTT 5 9069043 0.978364312 4 5 42 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3L:9069027-9069073 7 CG4911 FBtr0345351 9067193 9070515 TGCAATA 7mer-A1 dme-miR-92b-3p 3L - 9069037 9069082 3'utr CG4911 FlyBase G26921.1 ATGTAACCAATGCATGTAATCATTTTTTATGAACTGCAATAGCAAA 5 9069054 0.984929473 4 5 35 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3L:9069037-9069082 7 3 1630 FBgn0035959 1732.163333 43.72333333 67.07666667 0.001731938 0.06861325 0.044724942 -5 6 0.5 0.25 dme-bantam-3p 7mer-A1 GATCTCA 3L 9069143 9069149 - 3L_9069143_9069149_- 0.795232976 0.789755287 0.792494132 0.003873319 CG4911 FBtr0345351 9067193 9070515 3L - 9069108 9069178 3'utr CG4911 FlyBase G35581.1 GGGACAAGTAACAACCGCAAACAAAATGCGATCTCACAGATAACTCCTACAACTATCCAATCGACCATCTA 75 9069152 0.969327952 5 70 230 0.927710843 1.40936947 0.048192771 0.093333333 0.180722892 75 4 2 77 3L:9069108-9069178 7 CG4911 FBtr0345351 9067193 9070515 GATCTCA 7mer-A1 dme-bantam-3p 3L - 9069120 9069187 3'utr CG4911 FlyBase G26922.1 TTGGTTTCTGGGACAAGTAACAACCGCAAACAAAATGCGATCTCACAGATAACTCCTACAACTATCCA 51 9069152 0.951964142 5 44 173 0.817073171 1.826074803 0.048780488 0.450980392 0.658536585 51 15 0 67 3L:9069120-9069187 7 59.5 1631 FBgn0035959 1732.163333 43.72333333 67.07666667 0.034350109 1.360829458 0.887044675 3 3 3 0.25 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 3L 9069343 9069350 - 3L_9069343_9069350_- 0.669488744 0.669215509 0.669352126 0.000193182 CG4911 FBtr0345351 9067193 9070515 3L - 9069327 9069372 3'utr CG4911 FlyBase G35583.1 AACAGCAACAACAACAAAAATGGTACCTGAAGATCATGCCGAGCAT 23 9069352 0.935337378 2 19 70 0.833333333 1.301029996 0.041666667 0.043478261 0.083333333 23 4 0 20 3L:9069327-9069372 8 CG4911 FBtr0345351 9067193 9070515 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3L - 9069318 9069370 3'utr CG4911 FlyBase G26924.1 CAGCAACAACAACAAAAATGGTACCTGAAGATCATGCCGAGCATTTAGAGAAC 17 9069352 0.927031509 3 14 47 0.833333333 1.301029996 0 0.411764706 0.583333333 17 4 0 20 3L:9069318-9069370 8 19 1632 FBgn0035959 1732.163333 43.72333333 67.07666667 0.010968942 0.434550583 0.283257964 2 2 2 0.25 dme-miR-283-5p 8mer-A1 TGATATTA 3L 9069700 9069707 - 3L_9069700_9069707_- 0.591111461 0.591994751 0.591553106 0.000624587 CG4911 FBtr0345351|FBtr0331549|FBtr0076542 9067193|9069647|9069647 9070515|9070515|9070515 3L - 9069676 9069738 3'utr CG4911 FlyBase G35586.1 CGCTAAGCGCCGCCATTTGTGTAGTTTAAAGTGATATTACCAGCAACAGCAAAGCAAAATGTA 29 9069701 0.986657182 8 26 216 0.918918919 1.531478917 0.27027027 0.206896552 0.378378378 29 3 0 34 3L:9069676-9069738 8 CG4911 FBtr0076542|FBtr0345351|FBtr0331549 9069647|9067193|9069647 9070515|9070515|9070515 TGATATTA 8mer-A1 dme-miR-283-5p 3L - 9069681 9069746 3'utr CG4911 FlyBase G26926.1 TCCTCGTTCGCTAAGCGCCGCCATTTGTGTAGTTTAAAGTGATATTACCAGCAACAGCAAAGCAAA 18 9069713 0.982269566 6 17 127 0.956521739 1.342422681 0.52173913 0.222222222 0.391304348 18 1 0 22 3L:9069681-9069746 8 20 1633 FBgn0035959 1732.163333 43.72333333 67.07666667 0.011546255 0.457421667 0.298166277 -6 6 0 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 9069795 9069801 - 3L_9069795_9069801_- 0.502664239 0.450009011 0.476336625 0.037232849 CG4911 FBtr0345351|FBtr0345351|FBtr0345351|FBtr0331549|FBtr0331549|FBtr0331549|FBtr0076542|FBtr0076542|FBtr0076542 9067193|9067193|9067193|9069647|9069647|9069647|9069647|9069647|9069647 9070515|9070515|9070515|9070515|9070515|9070515|9070515|9070515|9070515 3L - 9069784 9069841 3'utr CG4911 FlyBase G35587.1 TTTGTAGTAGTGTGAATAAGTACAGAATCTGGCGCTCAATTGTGATAAACCAACAAAC 81 9069802 0.707621314 10 73 435 0.894736842 1.327358934 0.168421053 0.135802469 0.263157895 81 7 3 85 3L:9069784-9069841 7 CG4911 FBtr0076542|FBtr0076542|FBtr0076542|FBtr0345351|FBtr0345351|FBtr0345351|FBtr0331549|FBtr0331549|FBtr0331549 9069647|9069647|9069647|9067193|9067193|9067193|9069647|9069647|9069647 9070515|9070515|9070515|9070515|9070515|9070515|9070515|9070515|9070515 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 9069762 9069823 3'utr CG4911 FlyBase G26927.1 AGTACAGAATCTGGCGCTCAATTGTGATAAACCAACAAACAACAACATAAGCAAATGTAACA 57 9069802 0.973574064 5 51 308 0.898876404 1.301029996 0.191011236 0.421052632 0.629213483 57 6 3 80 3L:9069762-9069823 7 65 1634 FBgn0035959 1732.163333 43.72333333 67.07666667 0.03752533 1.486620416 0.969040402 1 1 1 0.25 dme-miR-305-5p 8mer-A1 AGTACAAA 3L 9070214 9070221 - 3L_9070214_9070221_- 0.603648028 0.603604554 0.603626291 3.07E-05 CG4911 FBtr0345351|FBtr0331549|FBtr0076542 9067193|9069647|9069647 9070515|9070515|9070515 3L - 9070152 9070253 3'utr CG4911 FlyBase G35591.1 GTAATCAAAATCGCGATTAGCCCTTGTTTATTAGTACAAAAGCGACAGATCAAGAGCGACAGGAATGTTAGGAGCAAAGCAAAAGACTTGAGCACTTCACAA 46 9070222 0.859118576 9 39 275 0.862745098 1.342422681 0.235294118 0.108695652 0.196078431 46 6 1 44 3L:9070152-9070253 8 CG4911 FBtr0076542|FBtr0345351|FBtr0331549 9069647|9067193|9069647 9070515|9070515|9070515 AGTACAAA 8mer-A1 dme-miR-305-5p 3L - 9070153 9070283 3'utr CG4911 FlyBase G26929.1 ATGTTAAATTTTCCTAATTTCTTAGCCTTTGTAATCAAAATCGCGATTAGCCCTTGTTTATTAGTACAAAAGCGACAGATCAAGAGCGACAGGAATGTTAGGAGCAAAGCAAAAGACTTGAGCACTTCACA 26 9070222 0.980559667 11 21 160 0.761904762 1.505149978 0.261904762 0.423076923 0.642857143 26 10 0 32 3L:9070153-9070283 8 24.5 1635 FBgn0035959 1732.163333 43.72333333 67.07666667 0.014144163 0.560341542 0.36525369 1 1 1 0.25 dme-miR-276a-3p 6mer3-8 AGTTCC 3L 9097232 9097237 + 3L_9097232_9097237_+ 0.765327382 0.939953391 0.852640387 0.123479229 CG13315 FBtr0076530|FBtr0340709 9097219|9097219 9097494|9097374 3L + 9097225 9097275 3'utr CG13315 FlyBase G29046.1 TAGTTTTAGTTCCGGCCTTGACATGTTCCTAATGTCGCACTAGACATACAT 77 9097234 0.73005564 8 76 572 0.989361702 1.968482949 0.138297872 0.194805195 0.340425532 77 1 0 93 3L:9097225-9097275 6 CG13315 FBtr0340709|FBtr0076530 9097219|9097219 9097374|9097494 AGTTCC 6mer3-8 dme-miR-276a-3p 3L + 9097225 9097273 3'utr CG13315 FlyBase G21984.1 TAGTTTTAGTTCCGGCCTTGACATGTTCCTAATGTCGCACTAGACATAC 47 9097234 0.716352278 9 44 369 0.918918919 1.832508913 0.22972973 0.361702128 0.594594595 47 6 0 68 3L:9097225-9097273 6 54.5 1636 FBgn0040827 102.6933333 24.86 37.96 0.53070631 2.19227675 1.435721812 -2 -2 -2 0.25 dme-miR-283-5p 8mer-A1 TGATATTA 3L 9348311 9348318 + 3L_9348311_9348318_+ 0.585109533 0.585199844 0.585154689 6.39E-05 PGRP-LC FBtr0308349|FBtr0089492|FBtr0346814|FBtr0089491 9348174|9347217|9348174|9348174 9348336|9348336|9348336|9348336 3L + 9348291 9348330 3'utr PGRP-LC FlyBase G29076.1 ATTCGTTTAAAAAGAAAATGTGATATTAAATAAAACAAAA 80 9348316 0.667474309 7 73 446 0.914893617 1.33243846 0 0.1375 0.265957447 80 5 3 86 3L:9348291-9348330 8 PGRP-LC FBtr0089491|FBtr0346814|FBtr0089492|FBtr0308349 9348174|9348174|9347217|9348174 9348336|9348336|9348336|9348336 TGATATTA 8mer-A1 dme-miR-283-5p 3L + 9348291 9348332 3'utr PGRP-LC FlyBase G22004.1 ATTCGTTTAAAAAGAAAATGTGATATTAAATAAAACAAAATG 58 9348316 0.658098571 6 53 335 0.91954023 1.425968732 0.011494253 0.362068966 0.574712644 58 5 2 80 3L:9348291-9348332 8 68.5 1637 FBgn0035976 208.34 13.13 20.06 0.328789479 5.217060168 3.414755733 -5 -5 -5 0.25 dme-miR-92b-3p 6mer3-8 GTGCAA 3L 9359565 9359570 + 3L_9359565_9359570_+ 0.967672924 0.976125931 0.971899427 0.005977174 CG32039 FBtr0345605|FBtr0076441 9359489|9359489 9359996|9359747 3L + 9359541 9359602 3'utr CG32039 FlyBase G29083.1 GTTCCCACATCTTTACTGACTTTTGTGCAAAGTTTTTGTACTACTCCGTATTTGTATTTGTA 34 9359563 0.740841541 8 33 377 0.973684211 1.568201724 0.184210526 0.117647059 0.210526316 34 1 0 37 3L:9359541-9359602 6 CG32039 FBtr0076441|FBtr0345605 9359489|9359489 9359747|9359996 GTGCAA 6mer3-8 dme-miR-92b-3p 3L + 9359534 9359603 3'utr CG32039 FlyBase G22012.1 CAAATTTGTTCCCACATCTTTACTGACTTTTGTGCAAAGTTTTTGTACTACTCCGTATTTGTATTTGTAT 23 9359563 0.991557721 6 23 252 1 1.505149978 0.125 0.304347826 0.5 23 0 0 32 3L:9359534-9359603 6 23 1638 FBgn0052039 133.9666667 27.61666667 42.45333333 0.171684499 0.832830416 0.541771357 2 2 2 0.25 dme-bantam-3p 7mer-A1 GATCTCA 3L 9369143 9369149 + 3L_9369143_9369149_+ 0.494163031 0.669127088 0.581645059 0.123718302 CG4452 FBtr0333883 9369104 9370300 3L + 9369093 9369171 stop_codon CG4452 FlyBase G29090.1 AATAGCGGCGTGAATGCCGTAAGCGGAGCTGGATTGGATCTACCTGATAAGATCTCACGCGGAAATGGTGGTAATGGGA 19 9369139 0.974562639 6 16 96 0.826086957 0.977723605 0.52173913 0.210526316 0.347826087 19 3 1 19 3L:9369093-9369171 7 CG4452 FBtr0333883 9369104 9370300 GATCTCA 7mer-A1 dme-bantam-3p 3L + 9369116 9369178 3'utr CG4452 FlyBase G22019.1 CGGAGCTGGATTGGATCTACCTGATAAGATCTCACGCGGAAATGGTGGTAATGGGACCATTGC 15 9369139 0.925827438 9 14 78 0.958333333 1.361727836 0.25 0.4 0.625 15 1 0 23 3L:9369116-9369178 7 13 1639 FBgn0035981 206.7633333 15.1 22.93333333 0.062873817 0.860927152 0.566860465 4 4 4 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3L 9374893 9374899 + 3L_9374893_9374899_+ 0.33578697 0.383401223 0.359594097 0.033668324 Hsp67Bb FBtr0100655 9373443 9374964 3L + 9374874 9374920 3'utr Hsp67Bb FlyBase G29098.1 AAGTTAATTTTAAAACAATTGTGATTCGGTAGCCCGCAAGCCCAATA 140 9374892 0.700553342 9 128 965 0.910828025 1.456366033 0.286624204 0.107142857 0.203821656 140 10 4 143 3L:9374874-9374920 7 Hsp67Bb FBtr0100655 9373443 9374964 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 9374874 9374917 3'utr Hsp67Bb FlyBase G22024.1 AAGTTAATTTTAAAACAATTGTGATTCGGTAGCCCGCAAGCCCA 61 9374892 0.944811498 9 53 418 0.906976744 1.414973348 0.162790698 0.327868852 0.523255814 61 6 2 78 3L:9374874-9374917 7 100.5 1640 FBgn0001228 1.666666667 0.403333333 0.57 60.3 249.1735537 176.3157895 1 1 1 0.25 dme-miR-308-3p 8mer-m1 CTGTGATT 3L 9387233 9387240 - 3L_9387233_9387240_- 0.382317904 0.38387298 0.383095442 0.001099622 CG4080 FBtr0309506 9386825 9387784 3L - 9387145 9387359 3'utr CG4080 FlyBase G35644.1 ACTAAGTTGTCCATGCCAAAAAGCCCAAAAACCAACCAGAGACGGTAATTATTTAGTCCATGTGTAGGATGTGTTTTGTTTCTTAACTTCTAAGTCAAATGAAATTTTAAAAAATTGATCTGTGATTAAGCGTCATTGAATATACATACATAACGTGCATAAATGCAAGCAAAAACATATTGACAGCAGCCGCAGCCGTAGAAAATGCAGAAAAA 153 9387241 0.979650894 20 149 1026 0.973958333 2.271841607 0.052083333 0.215686275 0.375 153 5 0 187 3L:9387145-9387359 8 CG4080 FBtr0309506 9386825 9387784 CTGTGATT 8mer-m1 dme-miR-308-3p 3L - 9387185 9387255 3'utr CG4080 FlyBase G26958.1 TTTTAAAAAATTGATCTGTGATTAAGCGTCATTGAATATACATACATAACGTGCATAAATGCAAGCAAAAA 70 9387241 0.840737221 10 68 476 0.981481481 1.72427587 0.018518519 0.4 0.611111111 70 1 1 106 3L:9387185-9387255 8 84.5 1641 FBgn0035983 376.7 13.10666667 19.99333333 0.224316432 6.447100712 4.226408803 1 1 1 0.25 dme-bantam-3p 6mer3-8 TGATCT 3L 9387739 9387744 - 3L_9387739_9387744_- 0.977775131 0.963397141 0.970586136 0.010166781 CG4080 FBtr0309506 9386825 9387784 3L - 9387660 9387784 3'utr CG4080 FlyBase G35646.1 AATGGAGTATCCTGCCCAACTGATCTGATGTGATCCACTATGATCTGCGCGCTCTTTCTCCCCCCAATAAGCTCTGCTCTCTCAAGTATTCACCGCTGGTCGACGGAGACCCCGAGATCCACATA 95 9387726 0.980145537 20 89 626 0.948717949 1.744292983 0.213675214 0.178947368 0.333333333 95 5 1 111 3L:9387660-9387784 6 CG4080 FBtr0076494|FBtr0309506 9387507|9386825 9387784|9387784 TGATCT 6mer3-8 dme-bantam-3p 3L - 9387670 9387788 stop_codon CG4080 FlyBase G26961.1 GTGAAATGGAGTATCCTGCCCAACTGATCTGATGTGATCCACTATGATCTGCGCGCTCTTTCTCCCCCCAATAAGCTCTGCTCTCTCAAGTATTCACCGCTGGTCGACGGAGACCCCGA 76 9387727 0.977708638 15 70 489 0.922330097 1.67669361 0.174757282 0.289473684 0.475728155 76 7 1 95 3L:9387670-9387788 6 42.5 1642 FBgn0035983 376.7 13.10666667 19.99333333 0.112821874 3.242624619 2.12570857 -18 -17 -17.5 0.25 dme-miR-1003-3p 7mer-A1 TGTGAGA 3L 9412500 9412506 + 3L_9412500_9412506_+ 0.540270646 0.58614199 0.563206318 0.032435978 CG3689 FBtr0076456 9412188 9413637 3L + 9412447 9412523 3'utr CG3689 FlyBase G29119.1 TCGAAATTCAAAGATTGTTCTTGTACTTAATTTTGTAAATATGTCGACATACTTGTGAGACTGAGCGCAGCAATGTT 85 9412501 0.965089625 8 80 584 0.946808511 1.949390007 0.308510638 0.094117647 0.180851064 85 5 0 89 3L:9412447-9412523 7 CG3689 FBtr0076456 9412188 9413637 TGTGAGA 7mer-A1 dme-miR-1003-3p 3L + 9412449 9412533 3'utr CG3689 FlyBase G22035.1 GAAATTCAAAGATTGTTCTTGTACTTAATTTTGTAAATATGTCGACATACTTGTGAGACTGAGCGCAGCAATGTTATCCTTCTAT 57 9412501 0.872860357 8 49 409 0.821917808 1.301029996 0.328767123 0.228070175 0.397260274 57 11 2 60 3L:9412449-9412533 7 58.5 1643 FBgn0035987 792 73.75 112.5233333 0.073863636 0.793220339 0.519892171 -1 -1 -1 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3L 9414949 9414955 - 3L_9414949_9414955_- 0.500043213 0.510343312 0.505193262 0.007283271 CG3967 FBtr0076480|FBtr0331584 9414836|9414836 9415286|9415286 3L - 9414915 9414974 3'utr CG3967 FlyBase G35677.1 ACGAAAATACCTGACAAATTGTGATTACAACATATATAACTTATCATTTAACATTTAACT 35 9414956 0.975144011 4 34 216 0.97826087 1.653212514 0.065217391 0.228571429 0.413043478 35 1 0 45 3L:9414915-9414974 7 CG3967 FBtr0076480|FBtr0331584 9414836|9414836 9415286|9415286 TGTGATT 7mer-m1 dme-miR-308-3p 3L - 9414934 9414973 3'utr CG3967 FlyBase G26981.1 CGAAAATACCTGACAAATTGTGATTACAACATATATAACT 23 9414956 0.681656845 3 23 126 1 1.491361694 0.032258065 0.347826087 0.516129032 23 0 0 31 3L:9414934-9414973 7 28.5 1644 FBgn0035989 353.1 23.02 35.35666667 0.080713679 1.238053866 0.806071462 1 1 1 0.25 dme-miR-8-3p 6mer2-7 AGTATT 3L 9424401 9424406 + 3L_9424401_9424406_+ 0.996708317 0.998051623 0.99737997 0.000949857 aay FBtr0076457 9424361 9424781 3L + 9424371 9424438 3'utr aay FlyBase G29129.1 TACGTAAGGCGGTGGGGGAGTGGCGAATTTAGTATTTGAAATCAACGTGTTATAGCTCGTAGTGATGC 14 9424407 0.973040404 7 12 101 0.9375 0.875061263 0.25 0.142857143 0.25 14 0 1 15 3L:9424371-9424438 6 aay FBtr0076457 9424361 9424781 AGTATT 6mer2-7 dme-miR-8-3p 3L + 9424370 9424454 3'utr aay FlyBase G22041.1 ATACGTAAGGCGGTGGGGGAGTGGCGAATTTAGTATTTGAAATCAACGTGTTATAGCTCGTAGTGATGCACATGTTTATGCCCAA 16 9424409 0.979943091 7 14 102 0.869565217 1.301029996 0.52173913 0.375 0.565217391 16 3 0 20 3L:9424370-9424454 6 7.5 1645 FBgn0023129 178.6666667 14.14 21.50666667 0.041977612 0.530410184 0.348729076 -6 -8 -7 0.25 dme-miR-8-3p 7mer-m8 CAGTATT 3L 9428632 9428638 + 3L_9428632_9428638_+ 0.660876893 0.536882365 0.598879629 0.087677352 Shc FBtr0076458 9428433 9428671 3L + 9428612 9428673 3'utr Shc FlyBase G29140.1 TACAAATATGTGCATGTCTACAGTATTTTCCATTCGAATGCGAATAAAGATGATAAACGGAA 21 9428639 0.991320174 5 19 195 0.916666667 1.342422681 0.208333333 0.142857143 0.25 21 2 0 22 3L:9428612-9428673 7 Shc FBtr0076458 9428433 9428671 CAGTATT 7mer-m8 dme-miR-8-3p 3L + 9428615 9428658 3'utr Shc FlyBase G22052.1 AAATATGTGCATGTCTACAGTATTTTCCATTCGAATGCGAATAA 22 9428639 0.693836988 4 20 193 0.911764706 1.491361694 0.205882353 0.409090909 0.617647059 22 3 0 31 3L:9428615-9428658 7 20 1646 FBgn0015296 548 41.97 64.36666667 0.03649635 0.476530855 0.310719834 -7 -7 -7 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 9438111 9438116 + 3L_9438111_9438116_+ 0.607998666 0.658628079 0.633313372 0.035800392 MTF-1 FBtr0113323|FBtr0113323|FBtr0113323|FBtr0344237|FBtr0344237|FBtr0344237|FBtr0113324|FBtr0113324|FBtr0113324|FBtr0113322|FBtr0113322|FBtr0113322|FBtr0076459|FBtr0076459|FBtr0076459|FBtr0076460|FBtr0076460|FBtr0076460 9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921 9438711|9438711|9438711|9438711|9438711|9438711|9438704|9438704|9438704|9438711|9438711|9438711|9438711|9438711|9438711|9438711|9438711|9438711 3L + 9438067 9438156 3'utr MTF-1 FlyBase G29149.1 ACAAAAAATATCAAAGTGCATTTAAGTGAAACGATTCAATCATATGTGATCCCAGCGGAGGCTGGCCGCGCTATCCCAAAACCTACTATA 83 9438109 0.876780308 15 61 459 0.739130435 1.355387658 0.195652174 0.096385542 0.184782609 83 22 2 68 3L:9438067-9438156 6 MTF-1 FBtr0076460|FBtr0076460|FBtr0076460|FBtr0076459|FBtr0076459|FBtr0076459|FBtr0113322|FBtr0113322|FBtr0113322|FBtr0113324|FBtr0113324|FBtr0113324|FBtr0344237|FBtr0344237|FBtr0344237|FBtr0113323|FBtr0113323|FBtr0113323 9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921|9437921 9438711|9438711|9438711|9438711|9438711|9438711|9438711|9438711|9438711|9438704|9438704|9438704|9438711|9438711|9438711|9438711|9438711|9438711 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 9438070 9438155 3'utr MTF-1 FlyBase G22058.1 AAAAATATCAAAGTGCATTTAAGTGAAACGATTCAATCATATGTGATCCCAGCGGAGGCTGGCCGCGCTATCCCAAAACCTACTAT 64 9438110 0.785474249 13 44 323 0.673076923 1.544068044 0.240384615 0.40625 0.634615385 64 33 1 70 3L:9438070-9438155 6 62 1647 FBgn0040305 420.6966667 14.72 22.57 0.147374593 4.211956522 2.747009304 2 1 1.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 9452758 9452763 + 3L_9452758_9452763_+ 0.901988177 0.836241537 0.869114857 0.046489937 ghi FBtr0076462|FBtr0076462|FBtr0076462 9452442|9452442|9452442 9452790|9452790|9452790 3L + 9452731 9452778 3'utr ghi FlyBase G29166.1 AATAAATCTAACGCTTACACAATCGCACTGTGAAATAGTTAAAAAAAG 17 9452766 0.711981419 5 14 86 0.884615385 1.361727836 0.192307692 0.352941176 0.576923077 17 3 0 23 3L:9452731-9452778 6 ghi FBtr0076462|FBtr0076462|FBtr0076462 9452442|9452442|9452442 9452790|9452790|9452790 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 9452637 9452774 3'utr ghi FlyBase G22071.1 ATCTGAAGTGGACAACACCCGGCGACTGTCCATCAATAGCTGCCTCACCGTTTAATGTAGTTATCTAGCAGTAGTTACAAGTTTAAAGTCAGTTAATAAATCTAACGCTTACACAATCGCACTGTGAAATAGTTAAAA 22 9452766 0.93214717 12 19 129 0.909090909 1.477121255 0.121212121 0.409090909 0.606060606 22 3 0 30 3L:9452637-9452774 6 12 1648 FBgn0266124 200.3333333 37.04333333 56.53333333 0.059900166 0.323944929 0.212264151 -8 -8 -8 0.25 dme-bantam-3p 6mer3-8 TGATCT 3L 9453120 9453125 - 3L_9453120_9453125_- 0.94354511 0.949397098 0.946471104 0.004137989 phol FBtr0076475|FBtr0345600 9453046|9452801 9453529|9453529 3L - 9453086 9453238 3'utr phol FlyBase G35697.1 AGTTCTAAGAGTTTAGCTTGTACCGTAGGCTAAGTGAGTCCCCCCGCAAAACCAAAACTGAACCGTAATCCCCGAAGAACTCAGCCAAACTGTCACCTTAAAAAGCCCCAATTTGATCTGATACTAATCGTGTGCGATCTTCGCTCGAATAAC 163 9453126 0.970284628 14 157 899 0.971014493 1.826074803 0.004830918 0.226993865 0.391304348 163 4 2 201 3L:9453086-9453238 6 phol FBtr0076475|FBtr0345600 9453046|9452801 9453529|9453529 TGATCT 6mer3-8 dme-bantam-3p 3L - 9453103 9453143 3'utr phol FlyBase G26995.1 CCTTAAAAAGCCCCAATTTGATCTGATACTAATCGTGTGCG 100 9453126 0.961073316 6 98 546 0.980645161 2.181843588 0.012903226 0.38 0.6 100 3 0 152 3L:9453103-9453143 6 121.5 1649 FBgn0035997 881.8933333 31.6 48.47 0.137771764 3.844936709 2.506705178 1 1 1 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3L 9485714 9485720 + 3L_9485714_9485720_+ 0.419189769 0.443117135 0.431153452 0.016919156 Jarid2 FBtr0076468 9485591 9486530 3L + 9485696 9485767 3'utr Jarid2 FlyBase G29207.1 AAGAAATGTGTATACCTATGTGATTCGCCATCGCTAGTGAGCAGATAATTGATAATTGGGTGAAATATAGAA 41 9485720 0.735398812 9 40 294 0.981481481 1.72427587 0.148148148 0.219512195 0.407407407 41 1 0 53 3L:9485696-9485767 7 Jarid2 FBtr0076468 9485591 9486530 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 9485700 9485740 3'utr Jarid2 FlyBase G22094.1 AATGTGTATACCTATGTGATTCGCCATCGCTAGTGAGCAGA 25 9485719 0.861979896 6 24 168 0.96875 1.491361694 0.1875 0.2 0.375 25 1 0 31 3L:9485700-9485740 7 29.5 1650 FBgn0036004 1195.756667 17.17 26.52666667 0.024670571 1.718112988 1.112088464 -6 -5 -5.5 0.25 dme-miR-1012-3p 8mer-A1 TTGACTAA 3L 9485831 9485838 + 3L_9485831_9485838_+ 0.383843585 0.359521423 0.371682504 0.017198393 Jarid2 FBtr0076468 9485591 9486530 3L + 9485794 9485868 3'utr Jarid2 FlyBase G29208.1 ACAAAACACACATATTAATGCAACGTTTATCTCCCAGTTGACTAACTGACACTATTACTAACTGTAAGATAAGAG 16 9485831 0.962604106 8 15 102 0.954545455 1.021189299 0.318181818 0.3125 0.5 16 0 1 21 3L:9485794-9485868 8 Jarid2 FBtr0076468 9485591 9486530 TTGACTAA 8mer-A1 dme-miR-1012-3p 3L + 9485760 9485853 3'utr Jarid2 FlyBase G22095.1 ATATAGAAATGTCTACGAGTTAATCCATGGACACACAAAACACACATATTAATGCAACGTTTATCTCCCAGTTGACTAACTGACACTATTACTA 19 9485808 0.995888613 7 17 109 0.913043478 1.021189299 0 0.210526316 0.347826087 19 1 1 21 3L:9485760-9485853 8 9 1651 FBgn0036004 1195.756667 17.17 26.52666667 0.007526615 0.524170064 0.339281226 0 23 11.5 0.25 dme-miR-965-3p 6mer3-8 TACGCT 3L 9486169 9486174 + 3L_9486169_9486174_+ 0.783354251 0.81227561 0.797814931 0.020450447 Jarid2 FBtr0076468 9485591 9486530 3L + 9486056 9486179 3'utr Jarid2 FlyBase G29210.1 TATTGTATATAGAGAGCCTTAGTGTATGTACGTACTACGTAGTTAGCTTTCGAATTAAGTCAAAGACCCTCAAAGAAACCATGCTAACGTGTTGCAATTTCTACTACCTTTTATACGCTAAGAT 26 9486166 0.988620572 15 24 224 0.965517241 1.447158031 0.103448276 0.076923077 0.172413793 26 1 0 28 3L:9486056-9486179 6 Jarid2 FBtr0076468 9485591 9486530 TACGCT 6mer3-8 dme-miR-965-3p 3L + 9486144 9486170 3'utr Jarid2 FlyBase G22098.1 GTGTTGCAATTTCTACTACCTTTTATA 6 9486166 0.677102956 2 6 59 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3L:9486144-9486170 2 5.5 1652 FBgn0036004 1195.756667 17.17 26.52666667 0.004599598 0.32032615 0.207338527 3 3 3 0.25 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3L 9486489 9486495 - 3L_9486489_9486495_- 0.808379141 0.808020688 0.808199914 0.000253427 pall FBtr0076471|FBtr0076471 9486446|9486446 9486622|9486622 3L - 9486448 9486554 3'utr pall FlyBase G35731.1 AGCATTAATTAGGCAGTGCATCTTCGATATATCGCGTTAAGATTTATTGTTGCACTTGTTACTTAAATATTGTATTACTACTATATAAATACATTGAACATCTAGTG 12 9486498 0.99437503 7 11 120 0.916666667 0.740362689 0.083333333 0 0 12 0 1 11 3L:9486448-9486554 7 pall FBtr0076471|FBtr0076471 9486446|9486446 9486622|9486622 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3L - 9486465 9486509 3'utr pall FlyBase G27015.1 ATTGTTGCACTTGTTACTTAAATATTGTATTACTACTATATAAAT 8 9486485 0.787775698 5 8 95 1 1.041392685 0 0.375 0.545454545 8 0 0 11 3L:9486465-9486509 7 7.5 1653 FBgn0036005 105.5133333 10.81333333 16.61 0.071081064 0.693588163 0.45153522 3 -10 -3.5 0.25 dme-miR-932-5p 6mer2-7 GAATTG 3L 9494988 9494993 - 3L_9494988_9494993_- 0.903986094 0.851037208 0.877511651 0.037440526 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 3L - 9494884 9495010 3'utr path FlyBase G35739.1 GAGTAATAAGTTACATTGAATTGCCCCGATATTCACTATGTGTAAACATACTTATTTTGTTGCATACATATTTTTGTATTTTAATTATAGCTATTAAAGAGAAATACTTAGCGAAACTATCAAGTAA 28 9494990 0.986577132 11 22 211 0.878787879 1.462397998 0.060606061 0.178571429 0.303030303 28 4 0 29 3L:9494884-9495010 6 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 GAATTG 6mer2-7 dme-miR-932-5p 3L - 9494974 9495005 3'utr path FlyBase G27021.1 ATAAGTTACATTGAATTGCCCCGATATTCACT 11 9494991 0.649993773 4 10 76 0.947368421 1.255272505 0.052631579 0.545454545 0.736842105 11 1 0 18 3L:9494974-9495005 6 13 1654 FBgn0036007 512.66 22.65333333 35.05666667 0.025357937 0.573866981 0.370828183 -3 -2 -2.5 0.25 dme-miR-276a-3p 6mer3-8 AGTTCC 3L 9495066 9495071 - 3L_9495066_9495071_- 0.910986538 0.841817177 0.876401858 0.048910081 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 3L - 9495044 9495088 3'utr path FlyBase G35740.1 CTATTTTGCAATCGATCAGTTCCAAATATGTTGAGCTAAATTACT 24 9495069 0.846063913 5 23 196 0.96 1.079181246 0.08 0.041666667 0.08 24 0 1 24 3L:9495044-9495088 6 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 AGTTCC 6mer3-8 dme-miR-276a-3p 3L - 9495052 9495086 3'utr path FlyBase G27022.1 ATTTTGCAATCGATCAGTTCCAAATATGTTGAGCT 14 9495069 0.853252409 2 11 93 0.85 0.929418926 0.2 0.357142857 0.55 14 2 1 17 3L:9495052-9495086 6 15 1655 FBgn0036007 512.66 22.65333333 35.05666667 0.029259158 0.662154208 0.427878673 -2 -2 -2 0.25 dme-miR-995-5p 6mer3-8 AATTCG 3L 9495160 9495165 - 3L_9495160_9495165_- 0.9894679 0.969213816 0.979340858 0.014321811 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 3L - 9495144 9495190 3'utr path FlyBase G35741.1 CCCACTTTTACTTTGTTCCGTGGCAAATTCGCGTGATTTGCGTACAT 40 9495177 0.586167386 14 35 338 0.875 1.62324929 0.104166667 0.15 0.291666667 40 6 0 42 3L:9495144-9495190 6 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 AATTCG 6mer3-8 dme-miR-995-5p 3L - 9495108 9495189 3'utr path FlyBase G27023.1 CCACTTTTACTTTGTTCCGTGGCAAATTCGCGTGATTTGCGTACATTATTTAACATTTTAGCATGTTTAGTAAGTAAGCGTA 36 9495177 0.681578625 15 33 360 0.905660377 1.681241237 0.188679245 0.361111111 0.566037736 36 5 0 48 3L:9495108-9495189 6 26 1656 FBgn0036007 512.66 22.65333333 35.05666667 0.050715874 1.147733961 0.741656366 12 12 12 0.25 dme-miR-282-5p 7mer-m8 AGAGGCT 3L 9495298 9495304 - 3L_9495298_9495304_- 0.629621166 0.63092532 0.630273243 0.000922138 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 3L - 9495235 9495509 3'utr path FlyBase G35742.1 CTACCGAGCACCATTATGCCGTTTTAGCACGTTTTAGTACACTCGCGATTATATAATGTAGAGAGTAAGCTAGTTGATAGCCGTTCAGAAACACTTTTAGAACAGTTCTGAACGATTCAAGCGGCATTCAAACTGGAACTTTACTAAGTGCACTTTAATAGTTTCCTATTGATTTCCTATTAATACCATTTAGTATGGATCTGTAAGAGGCTTAGTTACGTACCATCCTCCAAAAATCCCCACCCTTTCCTCTCTGTTCTAAAATAGTATTACTC 153 9495297 0.925718003 52 145 1226 0.95212766 1.775731776 0.14893617 0.189542484 0.340425532 153 7 2 179 3L:9495235-9495509 7 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 AGAGGCT 7mer-m8 dme-miR-282-5p 3L - 9495290 9495353 3'utr path FlyBase G27024.2 AATAGTTTCCTATTGATTTCCTATTAATACCATTTAGTATGGATCTGTAAGAGGCTTAGTTACG 47 9495297 0.679395505 14 45 391 0.96875 1.792391689 0.078125 0.319148936 0.5 47 2 0 62 3L:9495290-9495353 7 42 1657 FBgn0036007 512.66 22.65333333 35.05666667 0.081925643 1.854031783 1.198060283 -7 -7 -7 0.25 dme-miR-34-5p 7mer-A1 ACTGCCA 3L 9507401 9507407 - 3L_9507401_9507407_- 0.64876395 0.664771473 0.656767712 0.011319012 CG3408 FBtr0076426|FBtr0333863 9506816|9506816 9507578|9507578 3L - 9507354 9507484 3'utr CG3408 FlyBase G35760.1 AATTCAAAATGAGATACGTGTTGACCACCTGAACGAGTTATACGACTGCTACTTTGATATACCATTATCTGTAATTTACTGCCATTTATTTTGATAGACACTAAGCCCACTACGTCCATTGAAGGGAGATT 98 9507435 0.804423284 23 93 690 0.947826087 2.037426498 0.295652174 0.153061224 0.27826087 98 6 0 109 3L:9507354-9507484 7 CG3408 FBtr0076426|FBtr0333863 9506816|9506816 9507578|9507578 ACTGCCA 7mer-A1 dme-miR-34-5p 3L - 9507354 9507484 3'utr CG3408 FlyBase G27043.1 AATTCAAAATGAGATACGTGTTGACCACCTGAACGAGTTATACGACTGCTACTTTGATATACCATTATCTGTAATTTACTGCCATTTATTTTGATAGACACTAAGCCCACTACGTCCATTGAAGGGAGATT 90 9507436 0.987277269 25 82 724 0.920863309 1.26211193 0.258992806 0.4 0.611510791 90 5 6 128 3L:9507354-9507484 7 26.5 1658 FBgn0036008 265.6766667 17.37666667 26.79 0.099745304 1.52503357 0.989175065 28 29 28.5 0.25 dme-miR-14-3p 7mer-A1 AGACTGA 3L 9596485 9596491 + 3L_9596485_9596491_+ 0.815318878 0.815969015 0.815643946 0.00045969 CG42673 FBtr0302711 9595238 9596713 3L + 9596463 9596513 3'utr CG42673 FlyBase G29216.1 AATTTATGCAAAACGATTTTTGAGACTGAAACTGAAATTTGTACTAAGCAT 59 9596483 0.771565812 4 59 355 1 1.819543936 0.348484848 0.101694915 0.196969697 59 0 0 66 3L:9596463-9596513 7 CG42673 FBtr0302711 9595238 9596713 AGACTGA 7mer-A1 dme-miR-14-3p 3L + 9596463 9596500 3'utr CG42673 FlyBase G22103.1 AATTTATGCAAAACGATTTTTGAGACTGAAACTGAAAT 69 9596483 0.712520464 4 68 417 0.989010989 1.954242509 0.395604396 0.289855072 0.461538462 69 1 0 90 3L:9596463-9596500 7 63.5 1659 FBgn0261555 60.33333333 2.016666667 3.083333333 1.052486188 31.48760331 20.59459459 2 2 2 0.25 dme-miR-79-3p 7mer-A1 AGCTTTA 3L 9623600 9623606 + 3L_9623600_9623606_+ 0.806467947 0.794200725 0.800334336 0.00867422 LanB2 FBtr0076382|FBtr0345031 9623389|9623389 9623980|9623980 3L + 9623576 9623671 3'utr LanB2 FlyBase G29254.3 AAGGAGACCAACTGAGCAACGTTAAGCTTTAACGCATCATCGTTCGCCTACTGTATGCCATATACTATAATGATACAACGGATACAAGAGGATGGA 57 9623598 0.97239241 10 50 323 0.884057971 1.183269844 0.376811594 0.175438596 0.31884058 57 5 3 61 3L:9623576-9623671 7 LanB2 FBtr0345031|FBtr0076382 9623389|9623389 9623980|9623980 AGCTTTA 7mer-A1 dme-miR-79-3p 3L + 9623577 9623638 3'utr LanB2 FlyBase G22134.3 AGGAGACCAACTGAGCAACGTTAAGCTTTAACGCATCATCGTTCGCCTACTGTATGCCATAT 38 9623598 0.823802956 5 30 215 0.833333333 1.22184875 0.25 0.394736842 0.616666667 38 8 2 50 3L:9623577-9623638 7 38 1660 FBgn0267348 4568.76 93.89666667 143.73 0.008317355 0.404700202 0.26438461 2 2 2 0.25 dme-miR-33-5p 6mer3-8 CAATGC 3L 9716249 9716254 + 3L_9716249_9716254_+ 0.907303541 0.772215408 0.839759474 0.095521712 vsg FBtr0076399|FBtr0076400|FBtr0076398|FBtr0076401 9716221|9716221|9716221|9716221 9717716|9717716|9717716|9717716 3L + 9716196 9716339 stop_codon vsg FlyBase G29291.1 AACGAGCGCAACTACCACACCCTTTGAGCCGCCACCGCCTTTACGTCGGCCTTCAATGCGGCAGCCGGAGCTGCGGCGGCCAGCAGCAGTGCCGCATCCACGGATGCGGAGCGCGTGCGGTTTGTCCAGCCTTCGATACCGCTA 63 9716252 0.971479196 14 61 244 0.972972973 1.556302501 0.324324324 0.158730159 0.283783784 63 1 1 72 3L:9716196-9716339 6 vsg FBtr0076401|FBtr0076398|FBtr0076399|FBtr0076400 9716221|9716221|9716221|9716221 9717716|9717716|9717716|9717716 CAATGC 6mer3-8 dme-miR-33-5p 3L + 9716205 9716282 stop_codon vsg FlyBase G22165.1 AACTACCACACCCTTTGAGCCGCCACCGCCTTTACGTCGGCCTTCAATGCGGCAGCCGGAGCTGCGGCGGCCAGCAGC 19 9716252 0.980689344 5 19 61 1 1.414973348 0.423076923 0.315789474 0.5 19 0 0 26 3L:9716205-9716282 6 17.5 1661 FBgn0045823 8137.983333 435.5866667 668.4 0.00215041 0.040175702 0.026181927 -3 -3 -3 0.25 dme-miR-1003-3p 8mer-A1 ATGTGAGA 3L 9716931 9716938 + 3L_9716931_9716938_+ 0.562348841 0.514414994 0.538381917 0.033894315 vsg FBtr0076399|FBtr0076400|FBtr0330097|FBtr0076398|FBtr0076401 9716221|9716221|9716461|9716221|9716221 9717716|9717716|9717716|9717716|9717716 3L + 9716840 9716964 3'utr vsg FlyBase G29295.1 AGGGTCTTCCCAGGGCGACCATGAACCGAGAAATGAGTTATGAGATCGAAACGAAACGAGACGAGAGGAGTAAGAACAAATAACAGCAAATATGTGAGACTGCTTGATAGCGAGAAAGTGAAGAG 573 9716934 0.909584948 12 550 3109 0.96257485 1.853968463 0.359281437 0.144851658 0.266467066 573 17 8 643 3L:9716840-9716964 8 vsg FBtr0076401|FBtr0330097|FBtr0076398|FBtr0076399|FBtr0076400 9716221|9716461|9716221|9716221|9716221 9717716|9717716|9717716|9717716|9717716 ATGTGAGA 8mer-A1 dme-miR-1003-3p 3L + 9716821 9716968 3'utr vsg FlyBase G22170.1 AGTCCGGGGAGCCTGTCACAGGGTCTTCCCAGGGCGACCATGAACCGAGAAATGAGTTATGAGATCGAAACGAAACGAGACGAGAGGAGTAAGAACAAATAACAGCAAATATGTGAGACTGCTTGATAGCGAGAAAGTGAAGAGATCA 526 9716934 0.968363719 13 512 2794 0.974452555 2.301572525 0.412408759 0.418250951 0.627737226 526 18 3 801 3L:9716821-9716968 8 500.5 1662 FBgn0045823 8137.983333 435.5866667 668.4 0.061501723 1.14902507 0.748803112 -3 -3 -3 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 9721102 9721108 - 3L_9721102_9721108_- 0.487890122 0.523767961 0.505829041 0.025369506 nbs FBtr0306041|FBtr0306041|FBtr0306041 9720412|9720412|9720412 9722003|9722003|9722003 3L - 9721089 9721133 5'utr nbs FlyBase G35833.1 GCTAAACGAAAGCGACAGCGATGATTGTGATAATCTTTTTAACTT 40 9721110 0.982852556 2 36 276 0.934782609 1.33243846 0.152173913 0.153846154 0.282608696 39 2 1 43 3L:9721089-9721133 7 nbs FBtr0306041|FBtr0306041|FBtr0306041 9720412|9720412|9720412 9722003|9722003|9722003 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 9721084 9721129 5'utr nbs FlyBase G27102.1 AACGAAAGCGACAGCGATGATTGTGATAATCTTTTTAACTTTGCAG 33 9721109 0.984256654 6 29 231 0.914893617 1.633468456 0.191489362 0.393939394 0.574468085 33 4 0 43 3L:9721084-9721129 7 35.5 1663 FBgn0261530 423 19.85333333 30.51333333 0.08392435 1.788112827 1.163425825 2 1 1.5 0.25 dme-miR-932-5p 6mer3-8 GGAATT 3L 9729294 9729299 + 3L_9729294_9729299_+ 0.681763705 0.664064261 0.672913983 0.012515366 Naa60 FBtr0089410|FBtr0089411 9728844|9728844 9729650|9729650 3L + 9729215 9729309 3'utr Naa60 FlyBase G29317.1 AAAAGATATCTATCTGTTCACTACTGCTGTAAATAGTCTTATGATGTTTTGTTTGAATCGAGCTGTAACCGAGTGATTTGGAATTAGCATAGCCC 27 9729292 0.755131322 8 25 202 0.96875 1.491361694 0.5 0.148148148 0.28125 27 1 0 31 3L:9729215-9729309 6 Naa60 FBtr0089411|FBtr0089410 9728844|9728844 9729650|9729650 GGAATT 6mer3-8 dme-miR-932-5p 3L + 9729265 9729302 3'utr Naa60 FlyBase G22185.1 GTTTGAATCGAGCTGTAACCGAGTGATTTGGAATTAGC 10 9729292 0.961810727 3 10 57 1 1.278753601 0.157894737 0.5 0.736842105 10 0 0 19 3L:9729265-9729302 6 12.5 1664 FBgn0036039 253.3733333 14.26 21.89 0.049334316 0.87657784 0.571037003 2 2 2 0.25 dme-miR-305-5p 7mer-A1 GTACAAA 3L 9839158 9839164 - 3L_9839158_9839164_- 0.667836124 0.662074579 0.664955352 0.004073996 RasGAP1 FBtr0076368 9839091 9840561 3L - 9839145 9839187 3'utr RasGAP1 FlyBase G35847.1 CATGCCTAGCTGATAAGTTGTTGGTACAAAGAATCGAAAATAA 72 9839166 0.717684998 6 63 499 0.87804878 1.556302501 0.146341463 0.125 0.231707317 72 9 1 72 3L:9839145-9839187 7 RasGAP1 FBtr0076368 9839091 9840561 GTACAAA 7mer-A1 dme-miR-305-5p 3L - 9839096 9839189 3'utr RasGAP1 FlyBase G27116.1 ACCATGCCTAGCTGATAAGTTGTTGGTACAAAGAATCGAAAATAAAAACATAGATATTTTCCAAGGGAAAAATAAAGCGTATCGCCAATGGATA 85 9839166 0.980065407 8 79 551 0.952 1.598425707 0.192 0.364705882 0.568 85 4 2 119 3L:9839096-9839189 7 75.5 1665 FBgn0004390 1606.046667 35.75666667 55.00333333 0.047009842 2.11149436 1.372644082 2 2 2 0.25 dme-miR-277-3p 7mer-m8 TGCATTT 3L 9839216 9839222 - 3L_9839216_9839222_- 0.618720318 0.619778741 0.619249529 0.000748402 RasGAP1 FBtr0076368 9839091 9840561 3L - 9839201 9839265 3'utr RasGAP1 FlyBase G35848.1 TGTTTGGAGTTTCCAACGTGGTTCATATACATATAATTTCACTTGCATTTTAAGGACACAATTAT 8 9839224 0.986844698 6 8 69 1 1 0.2 0.25 0.4 8 0 0 10 3L:9839201-9839265 7 RasGAP1 FBtr0076368 9839091 9840561 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 9839203 9839230 3'utr RasGAP1 FlyBase G27117.1 ATTTCACTTGCATTTTAAGGACACAATT 5 9839216 0.97312014 4 5 37 1 0.698970004 0 0 0 5 0 0 5 3L:9839203-9839230 7 4.5 1666 FBgn0004390 1606.046667 35.75666667 55.00333333 0.002801911 0.125850657 0.081813223 2 -6 -2 0.25 dme-miR-7-5p 7mer-m8 GTCTTCC 3L 9839410 9839416 - 3L_9839410_9839416_- 0.589828618 0.690402579 0.640115598 0.071116557 RasGAP1 FBtr0076368 9839091 9840561 3L - 9839357 9839436 3'utr RasGAP1 FlyBase G35849.1 CATCAATCGCATTGAAAAGTGTCTTCCTTCGCCGCGTTCAATCATATTGCCTTTTGTTTATGCATTCCAATCCAATAATT 16 9839417 0.989993035 4 14 134 0.882352941 0.875061263 0.117647059 0.0625 0.117647059 16 1 1 15 3L:9839357-9839436 7 RasGAP1 FBtr0076368 9839091 9840561 GTCTTCC 7mer-m8 dme-miR-7-5p 3L - 9839397 9839432 3'utr RasGAP1 FlyBase G27118.1 AATCGCATTGAAAAGTGTCTTCCTTCGCCGCGTTCA 16 9839417 0.775990243 3 16 117 1 1.477121255 0.1 0.75 0.866666667 16 0 0 30 3L:9839397-9839432 7 14 1667 FBgn0004390 1606.046667 35.75666667 55.00333333 0.008717057 0.391535378 0.254530028 1 1 1 0.25 dme-miR-278-3p 7mer-A1 CCACCGA 3L 9839535 9839541 - 3L_9839535_9839541_- 0.776405868 0.772778796 0.774592332 0.002564747 RasGAP1 FBtr0076368 9839091 9840561 3L - 9839500 9839565 3'utr RasGAP1 FlyBase G35850.1 GATTTGGTTAGCTTCGACTTACTTCCACCGATTTGTTTCCAAAGCTCTTCCATATTAATTACACAT 37 9839543 0.782668924 11 37 302 1 1.69019608 0.081632653 0.243243243 0.428571429 37 0 0 49 3L:9839500-9839565 7 RasGAP1 FBtr0076368 9839091 9840561 CCACCGA 7mer-A1 dme-miR-278-3p 3L - 9839510 9839560 3'utr RasGAP1 FlyBase G27119.1 GGTTAGCTTCGACTTACTTCCACCGATTTGTTTCCAAAGCTCTTCCATATT 17 9839543 0.98754403 4 16 144 0.925925926 1.397940009 0.037037037 0.470588235 0.666666667 17 2 0 25 3L:9839510-9839560 7 24.5 1668 FBgn0004390 1606.046667 35.75666667 55.00333333 0.015254849 0.685186912 0.44542755 2 2 2 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 3L 9892397 9892402 + 3L_9892397_9892402_+ 0.952536839 0.966051213 0.959294026 0.009556124 CalpB FBtr0076343|FBtr0304675 9892344|9892344 9893319|9893011 3L + 9892355 9892415 3'utr CalpB FlyBase G29359.1 AATTGCTACTAATCTAATCCTAAGTGCGACGTATACTTAATCTACCTGTGCATCATATTAT 90 9892403 0.911279172 10 87 716 0.973684211 2.045322979 0.00877193 0.211111111 0.377192982 90 3 0 111 3L:9892355-9892415 6 CalpB FBtr0304675|FBtr0076343 9892344|9892344 9893011|9893319 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 3L + 9892373 9892424 3'utr CalpB FlyBase G22210.1 CCTAAGTGCGACGTATACTTAATCTACCTGTGCATCATATTATTCATGCATT 44 9892403 0.851781486 8 43 353 0.985915493 1.84509804 0.014084507 0.477272727 0.676056338 44 1 0 70 3L:9892373-9892424 6 64.5 1669 FBgn0025866 591.89 16.56333333 25.20333333 0.108972951 3.894143691 2.559185293 -6 -6 -6 0.25 dme-miR-282-5p 7mer-m8 AGAGGCT 3L 9893175 9893181 + 3L_9893175_9893181_+ 0.631524189 0.631513648 0.631518918 7.50E-06 CalpB FBtr0076343 9892344 9893319 3L + 9893160 9893188 3'utr CalpB FlyBase G29363.1 TAACCAATCGGGTTTAGAGGCTCTTTTTG 5 9893174 0.641428468 3 4 43 0.888888889 0.903089987 0.222222222 0.6 0.777777778 5 1 0 8 3L:9893160-9893188 7 CalpB FBtr0076343 9892344 9893319 AGAGGCT 7mer-m8 dme-miR-282-5p 3L + 9893154 9893188 3'utr CalpB FlyBase G22213.1 TGAAATTAACCAATCGGGTTTAGAGGCTCTTTTTG 8 9893174 0.980765952 4 8 64 1 1 0.6 0.125 0.3 8 0 0 10 3L:9893154-9893188 7 6 1670 FBgn0025866 591.89 16.56333333 25.20333333 0.010137019 0.362245925 0.238063748 1 1 1 0.25 dme-miR-283-5p 8mer-A1 TGATATTA 3L 9895667 9895674 - 3L_9895667_9895674_- 0.591898453 0.589560372 0.590729412 0.001653286 CG6707 FBtr0076356|FBtr0076358|FBtr0076357 9894805|9894805|9894805 9895759|9895759|9895759 3L - 9895656 9895736 3'utr CG6707 FlyBase G35913.1 AAGGAAGAAAGTGCATTGTTTTATTTTTATATATATATATTATTCATATATATCATTCCTTTTGATATTAAATTTAAAACT 17 9895675 0.963762983 10 16 186 0.95 1.278753601 0.1 0.176470588 0.3 17 1 0 19 3L:9895656-9895736 8 CG6707 FBtr0076357|FBtr0076356|FBtr0076358 9894805|9894805|9894805 9895759|9895759|9895759 TGATATTA 8mer-A1 dme-miR-283-5p 3L - 9895658 9895691 3'utr CG6707 FlyBase G27171.1 ATATATATCATTCCTTTTGATATTAAATTTAAAA 5 9895676 0.918878124 3 5 56 1 0.84509804 0 0.4 0.571428571 5 0 0 7 3L:9895658-9895691 8 7.5 1671 FBgn0036058 1005.72 59.74 91.51 0.007457344 0.125544024 0.081958256 1 2 1.5 0.25 dme-miR-283-5p 7mer-A1 GATATTA 3L 9902465 9902471 + 3L_9902465_9902471_+ 0.782897011 0.781081104 0.781989057 0.001284035 nudE FBtr0345694|FBtr0076344|FBtr0113158|FBtr0345695 9902278|9902337|9902278|9902278 9902965|9902965|9902965|9903031 3L + 9902430 9902531 3'utr nudE FlyBase G29378.1 ATTTGAACTAAAATGACTTTGTATAAACCACTTGCGATATTATGAATTACACAACAGTTGATGTTGTTGTTTCGAGCCCAACATATATAACATGCCTTAGTA 108 9902461 0.98142893 16 106 772 0.985185185 1.822821645 0.081481481 0.231481481 0.385185185 108 1 1 133 3L:9902430-9902531 7 nudE FBtr0345694|FBtr0076344|FBtr0113158|FBtr0345695 9902278|9902337|9902278|9902278 9902965|9902965|9902965|9903031 GATATTA 7mer-A1 dme-miR-283-5p 3L + 9902400 9902481 3'utr nudE FlyBase G22228.1 ATTAATTAAGTTTCTGCTGCCTCTTTATTTATTTGAACTAAAATGACTTTGTATAAACCACTTGCGATATTATGAATTACAC 87 9902449 0.831453804 11 86 641 0.992125984 1.799340549 0.007874016 0.344827586 0.551181102 87 0 1 126 3L:9902400-9902481 7 46.5 1672 FBgn0036059 1404.16 85.35333333 130.67 0.033115884 0.544794189 0.355858269 4 16 10 0.25 dme-miR-277-3p 7mer-A1 GCATTTA 3L 9970794 9970800 + 3L_9970794_9970800_+ 0.499888898 0.552197379 0.526043138 0.036987695 Dronc FBtr0076347 9970748 9971002 3L + 9970739 9970856 stop_codon Dronc FlyBase G29393.1 TCAACGAATAGTTGCCGCCACTGGACATTTTATCATTCCGGATGCATTTTTAACCGCATTTATGTTCTTATCGTCGCATTTAGTATGTCTTTTAGATTATGTGTTCTGTGCTCGCGTG 44 9970806 0.989297246 14 41 399 0.936170213 1.643452676 0.14893617 0.045454545 0.106382979 44 3 0 44 3L:9970739-9970856 7 Dronc FBtr0076347 9970748 9971002 GCATTTA 7mer-A1 dme-miR-277-3p 3L + 9970732 9970823 stop_codon Dronc FlyBase G22242.1 GGGTTTTTCAACGAATAGTTGCCGCCACTGGACATTTTATCATTCCGGATGCATTTTTAACCGCATTTATGTTCTTATCGTCGCATTTAGTA 22 9970787 0.989524333 11 20 192 0.9375 1.477121255 0.15625 0.409090909 0.59375 22 2 0 30 3L:9970732-9970823 7 21.5 1673 FBgn0026404 332.5566667 20.05666667 30.72333333 0.064650636 1.071962772 0.699793859 -12 7 -2.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 9970951 9970957 + 3L_9970951_9970957_+ 0.7505765 0.750473204 0.750524852 7.30E-05 Dronc FBtr0076347|FBtr0076347|FBtr0076347 9970748|9970748|9970748 9971002|9971002|9971002 3L + 9970935 9970974 3'utr Dronc FlyBase G29394.1 GAAATTATGTAATTTATGTGATAACTGCCAGAAATCTACA 35 9970948 0.642870553 6 31 267 0.87804878 1.255272505 0.414634146 0.142857143 0.268292683 35 4 1 36 3L:9970935-9970974 7 Dronc FBtr0076347|FBtr0076347|FBtr0076347 9970748|9970748|9970748 9971002|9971002|9971002 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 9970928 9970971 3'utr Dronc FlyBase G22243.1 AAGGTACGAAATTATGTAATTTATGTGATAACTGCCAGAAATCT 22 9970948 0.899930366 5 21 183 0.962962963 1.414973348 0.333333333 0.227272727 0.37037037 22 1 0 26 3L:9970928-9970971 7 28.5 1674 FBgn0026404 332.5566667 20.05666667 30.72333333 0.08569968 1.420973907 0.92763372 3 3 3 0.25 dme-miR-184-3p 6mer3-8 TCCGTC 3L 997929 997934 - 3L_997929_997934_- 0.885179715 0.877199061 0.881189388 0.005643136 trio FBtr0072646|FBtr0072645|FBtr0072649|FBtr0072648|FBtr0072647|FBtr0072644 995980|995980|997208|995980|995980|995980 998084|998084|998084|998084|998084|998084 3L - 997891 997959 3'utr trio FlyBase G33174.1 TGAGCATTAGCCTCGCACTTGTTTTTCCGTCTGTGCGTTTGTTTACGGATAGTTTTGCTCACTCACACC 79 997935 0.77147714 7 76 972 0.965517241 1.924279286 0.057471264 0.088607595 0.172413793 79 3 0 84 3L:997891-997959 6 trio FBtr0072647|FBtr0072644|FBtr0072646|FBtr0072645|FBtr0072649|FBtr0072648 995980|995980|995980|995980|997208|995980 998084|998084|998084|998084|998084|998084 TCCGTC 6mer3-8 dme-miR-184-3p 3L - 997837 997961 3'utr trio FlyBase G25102.1 AGTGAGCATTAGCCTCGCACTTGTTTTTCCGTCTGTGCGTTTGTTTACGGATAGTTTTGCTCACTCACACCCAGAAACACTCGCATACTCAATCCTAATTTGTATGTAACTTGTAATTGTAATTT 65 997935 0.987691095 10 64 769 0.97 1.986771734 0.09 0.369230769 0.59 65 3 0 97 3L:997837-997961 6 64.5 1675 FBgn0024277 3958.67 117.21 180.3966667 0.016293351 0.550294343 0.357545409 1 1 1 0.25 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 10002284 10002289 - 3R_10002284_10002289_- 0.600729282 0.642502778 0.62161603 0.029538325 Mical FBtr0347211|FBtr0082207|FBtr0347214|FBtr0347212|FBtr0082213|FBtr0082212|FBtr0082208|FBtr0082209|FBtr0306608|FBtr0347213|FBtr0082210|FBtr0306609 10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552 10009621|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434 3R - 10002262 10002302 3'utr Mical FlyBase G49745.1 ACTAAAACCCGTGAGCTGTAACCGAAACGAGCAACTAACTA 22 10002291 0.895274207 3 22 58 1 1.477121255 0 0.272727273 0.466666667 22 0 0 30 3R:10002262-10002302 6 Mical FBtr0306609|FBtr0306608|FBtr0347213|FBtr0082210|FBtr0082209|FBtr0082208|FBtr0082212|FBtr0082213|FBtr0347212|FBtr0347214|FBtr0082207|FBtr0347211 10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552|10001552 10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10002434|10009621 AGCTGT 6mer3-8 dme-miR-1008-3p 3R - 10002269 10002356 3'utr Mical FlyBase G37603.1 AGGGAACAGGGGAGAGCGTACCAAAAAGGCAGCTGAATATACAGAATTAACAATACTAAAACCCGTGAGCTGTAACCGAAACGAGCAA 29 10002291 0.900392162 6 27 72 0.953488372 1.612783857 0.162790698 0.413793103 0.604651163 29 2 0 41 3R:10002269-10002356 6 19.5 1676 FBgn0053208 877.6666667 10.30333333 15.81666667 0.022218002 1.892591394 1.232876712 2 2 2 0.25 dme-miR-283-5p 8mer-m1 TGATATTT 3R 10051478 10051485 + 3R_10051478_10051485_+ 0.532586574 0.555526344 0.544056459 0.016220817 CG3925 FBtr0082174 10051320 10051527 3R + 10051414 10051502 3'utr CG3925 FlyBase G41687.1 ATTCGTTTCACAACTACTTTTAGCAAAAACACACGGCGTTTGATGGCGTGGATGTAAACCTAATTGATATTTACGATTATTTGAATAAT 22 10051477 0.984328457 11 20 163 0.92 0.884606581 0.32 0.136363636 0.24 22 0 2 23 3R:10051414-10051502 8 CG3925 FBtr0082174 10051320 10051527 TGATATTT 8mer-m1 dme-miR-283-5p 3R + 10051413 10051489 3'utr CG3925 FlyBase G31461.1 AATTCGTTTCACAACTACTTTTAGCAAAAACACACGGCGTTTGATGGCGTGGATGTAAACCTAATTGATATTTACGA 16 10051477 0.982135605 8 15 114 0.961538462 1.397940009 0.230769231 0.4375 0.653846154 16 1 0 25 3R:10051413-10051489 8 9.5 1677 FBgn0037780 153.6666667 8.94 13.53666667 0.061822126 1.062639821 0.701797587 1 1 1 0.25 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 10073728 10073733 + 3R_10073728_10073733_+ 0.940119962 0.932670217 0.936395089 0.005267804 nerfin-2 FBtr0082177 10073452 10073761 3R + 10073668 10073749 stop_codon nerfin-2 FlyBase G41691.1 AGTCCGGCGGAAATGTTATCATGTGACTTAACAACTATTAGCAGCATTGAATCAACGATCTCTAGTTAAAGTTTAATAAATC 73 10073731 0.91463315 12 70 522 0.965909091 1.929418926 0.056818182 0.150684932 0.295454545 73 3 0 85 3R:10073668-10073749 6 nerfin-2 FBtr0082177 10073452 10073761 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 10073662 10073744 stop_codon nerfin-2 FlyBase G31463.1 CTGCAGAGTCCGGCGGAAATGTTATCATGTGACTTAACAACTATTAGCAGCATTGAATCAACGATCTCTAGTTAAAGTTTAAT 49 10073730 0.981557683 12 47 346 0.970149254 1.511883361 0.044776119 0.265306122 0.462686567 49 1 1 65 3R:10073662-10073744 6 36 1678 FBgn0041105 0.666666667 0.036666667 0.056666667 54 981.8181818 635.2941176 -3 -2 -2.5 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 3R 10119215 10119222 + 3R_10119215_10119222_+ 0.574717399 0.618555165 0.596636282 0.030998006 CG3940 FBtr0344391|FBtr0082179|FBtr0344392 10119168|10119168|10119168 10119424|10119424|10120081 3R + 10119169 10119257 3'utr CG3940 FlyBase G41707.1 GATTTGAGATGGACAACTTGAAGGGAGCAGCCAATGACATACTCGTACCAAAGAATCGTTTAAGACAACGAATTTGTTTACCAACTATT 157 10119214 0.896310599 13 153 718 0.978609626 1.961421094 0.28342246 0.146496815 0.28342246 157 3 1 183 3R:10119169-10119257 8 CG3940 FBtr0082179|FBtr0344392|FBtr0344391 10119168|10119168|10119168 10119424|10120081|10119424 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 10119187 10119275 3'utr CG3940 FlyBase G31474.1 TGAAGGGAGCAGCCAATGACATACTCGTACCAAAGAATCGTTTAAGACAACGAATTTGTTTACCAACTATTTTAACAATTTAACAAAAA 64 10119214 0.976016478 7 60 282 0.956521739 1.643452676 0.097826087 0.328125 0.532608696 64 3 1 88 3R:10119187-10119275 8 99.5 1679 FBgn0037788 7.956666667 0.546666667 0.833333333 12.5052367 182.0121951 119.4 1 1 1 0.25 dme-miR-970-3p 7mer-m8 TCTTATG 3R 10128050 10128056 - 3R_10128050_10128056_- 0.496010292 0.55156825 0.523789271 0.039285368 tws FBtr0082187|FBtr0082190|FBtr0082192|FBtr0082191|FBtr0082193|FBtr0345177|FBtr0082188|FBtr0082189|FBtr0082186 10126127|10126127|10127649|10127642|10127642|10126127|10127125|10126803|10127642 10128146|10128146|10128146|10128146|10128146|10128146|10128146|10128146|10128146 3R - 10128028 10128211 stop_codon tws FlyBase G49802.1 CCGAAGAAAATATCATCGCCGTGGCTGCGACCAATAACCTCTTCATATTTCAGGATAAATTTTAGCCAACACTCCTCACAAGAACCACACCATACGCCACAATCACACAAGCAACTATATCTACAGAAACACCAAGAAGTACGATCACGCCTCATTCTTATGTTAAATTAATCGGTTTGCTTCA 41 10128057 0.980352169 12 39 282 0.955555556 1.633468456 0.111111111 0.097560976 0.177777778 41 2 0 43 3R:10128028-10128211 7 tws FBtr0082189|FBtr0082186|FBtr0345177|FBtr0082188|FBtr0082191|FBtr0082193|FBtr0082187|FBtr0082190|FBtr0082192 10126803|10127642|10126127|10127125|10127642|10127642|10126127|10126127|10127649 10128146|10128146|10128146|10128146|10128146|10128146|10128146|10128146|10128146 TCTTATG 7mer-m8 dme-miR-970-3p 3R - 10128035 10128075 3'utr tws FlyBase G37651.1 AAGTACGATCACGCCTCATTCTTATGTTAAATTAATCGGTT 20 10128057 0.743410919 6 19 177 0.961538462 1.397940009 0.153846154 0.25 0.423076923 20 1 0 25 3R:10128035-10128075 7 21 1680 FBgn0004889 1118.713333 47.59666667 73.08666667 0.018771565 0.441207367 0.28733011 1 1 1 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3R 10158850 10158855 + 3R_10158850_10158855_+ 0.812155597 0.998645054 0.905400326 0.13186799 Invadolysin FBtr0082181 10158308 10159134 3R + 10158783 10158861 3'utr Invadolysin FlyBase G41714.1 AGCCAATCATTTTCGGGTGGATCATCCAAAGGCAGTTCTATGCTTCTTGAATATCGATCTGTACATTCCAAAGCCTATT 14 10158846 0.967226416 8 14 90 1 1.204119983 0.1875 0.142857143 0.25 14 0 0 16 3R:10158783-10158861 6 Invadolysin FBtr0082181 10158308 10159134 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 10158812 10158859 3'utr Invadolysin FlyBase G31480.1 AGGCAGTTCTATGCTTCTTGAATATCGATCTGTACATTCCAAAGCCTA 5 10158847 0.982929752 4 5 38 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:10158812-10158859 6 5 1681 FBgn0086359 69.66666667 2.306666667 3.503333333 0.071770335 2.167630058 1.427212179 4 3 3.5 0.25 dme-miR-999-3p 6mer3-8 AGTTAA 3R 10312110 10312115 - 3R_10312110_10312115_- 0.6860308 0.717552732 0.701791766 0.022289349 Bruce FBtr0331684|FBtr0331682|FBtr0082239|FBtr0331683|FBtr0331681 10312037|10312037|10312037|10312037|10312037 10312643|10312643|10312643|10312643|10312643 3R - 10312093 10312135 3'utr Bruce FlyBase G49875.1 ATGTATGAACGTAGTGATTTAGTTAAATATTGACACAAGAATA 40 10312117 0.890763749 5 36 333 0.918367347 1.352182518 0.142857143 0.225 0.367346939 40 3 1 45 3R:10312093-10312135 6 Bruce FBtr0331681|FBtr0331683|FBtr0082239|FBtr0331682|FBtr0331684 10312037|10312037|10312037|10312037|10312037 10312643|10312643|10312643|10312643|10312643 AGTTAA 6mer3-8 dme-miR-999-3p 3R - 10312101 10312139 3'utr Bruce FlyBase G37702.1 AACTATGTATGAACGTAGTGATTTAGTTAAATATTGACA 18 10312117 0.704239503 4 18 149 1 1.380211242 0.125 0.333333333 0.5 18 0 0 24 3R:10312101-10312139 6 29 1682 FBgn0266717 4248.75 33.1 50.67666667 0.006825537 0.876132931 0.572255476 2 2 2 0.25 dme-miR-965-3p 8mer-A1 TACGCTTA 3R 10360332 10360339 + 3R_10360332_10360339_+ 0.582834846 0.602096564 0.592465705 0.013620149 jumu FBtr0082237 10360257 10361612 3R + 10360291 10360360 3'utr jumu FlyBase G41772.1 ATCAATTAGTTTTAGACCTTTGGCATTTAAGAAACCCATGCTACGCTTAAACGTAATCCTAGAAGCCCCA 54 10360332 0.79811269 7 53 237 1 1.826074803 0.298507463 0.203703704 0.358208955 54 0 0 67 3R:10360291-10360360 8 jumu FBtr0082237 10360257 10361612 TACGCTTA 8mer-A1 dme-miR-965-3p 3R + 10360294 10360355 3'utr jumu FlyBase G31514.1 AATTAGTTTTAGACCTTTGGCATTTAAGAAACCCATGCTACGCTTAAACGTAATCCTAGAAG 55 10360332 0.768103162 8 50 250 0.918604651 1.2955671 0.348837209 0.309090909 0.558139535 55 4 3 79 3R:10360294-10360355 8 45 1683 FBgn0015396 1426.553333 44.76666667 68.68333333 0.031544562 1.005212211 0.655180781 0 0 0 0.25 dme-bantam-3p 7mer-m8 TGATCTC 3R 10360735 10360741 + 3R_10360735_10360741_+ 0.651045566 0.657588755 0.654317161 0.004626741 jumu FBtr0082237 10360257 10361612 3R + 10360707 10360817 3'utr jumu FlyBase G41776.2 GAGCTGGTTTGAGTTGCAACTTTTGATTTGATCTCCCTACTGACAAATAAATTTTCATCCTTCAATCGATAAGAAACTTGACAATGCATTTATGACAAACGATTCCACGCT 95 10360734 0.769639749 17 90 867 0.946902655 2.029383778 0.088495575 0.147368421 0.283185841 95 6 0 107 3R:10360707-10360817 7 jumu FBtr0082237 10360257 10361612 TGATCTC 7mer-m8 dme-bantam-3p 3R + 10360663 10360815 3'utr jumu FlyBase G31516.1 CCACTGACGACGCATGAAGCATGTTAATACTTTTTACCAGACTCGAGCTGGTTTGAGTTGCAACTTTTGATTTGATCTCCCTACTGACAAATAAATTTTCATCCTTCAATCGATAAGAAACTTGACAATGCATTTATGACAAACGATTCCACG 80 10360734 0.954561351 21 75 714 0.922330097 1.375663614 0.067961165 0.2625 0.427184466 80 5 3 95 3R:10360663-10360815 7 68 1684 FBgn0015396 1426.553333 44.76666667 68.68333333 0.047667338 1.518987342 0.990050959 1 1 1 0.25 dme-miR-8-3p 7mer-m8 CAGTATT 3R 10361004 10361010 + 3R_10361004_10361010_+ 0.63978911 0.638311076 0.639050093 0.001045104 jumu FBtr0082237 10360257 10361612 3R + 10360968 10361027 3'utr jumu FlyBase G41778.1 AATTGAAAGAGAATTGATCACACATACTTGCCGGTCCAGTATTCGTAAGCGAGGTATATT 95 10360997 0.849758722 10 92 592 0.983471074 2.075546961 0.132231405 0.210526316 0.380165289 95 2 0 119 3R:10360968-10361027 7 jumu FBtr0082237 10360257 10361612 CAGTATT 7mer-m8 dme-miR-8-3p 3R + 10360967 10361038 3'utr jumu FlyBase G31517.1 AAATTGAAAGAGAATTGATCACACATACTTGCCGGTCCAGTATTCGTAAGCGAGGTATATTGAGGATTTTTA 73 10360997 0.853718753 11 72 437 0.962616822 2.012837225 0.112149533 0.301369863 0.523364486 73 4 0 103 3R:10360967-10361038 7 72.5 1685 FBgn0015396 1426.553333 44.76666667 68.68333333 0.050821794 1.619508563 1.055569037 7 7 7 0.25 dme-miR-11-3p 7mer-m1 TGTGATG 3R 10361417 10361423 + 3R_10361417_10361423_+ 0.61045471 0.611428722 0.610941716 0.000688722 jumu FBtr0082237 10360257 10361612 3R + 10361396 10361509 3'utr jumu FlyBase G41780.1 TTTGTTATTACCCTTTTCTTTTGTGATGCTTCGACTTAGCTTGCGCATTTAACAATTCCATTTACGAACCAGGAACATTTATGCATTTTTTGTTGTAATATTAGCACCTAAATA 52 10361415 0.94948096 19 51 525 0.969230769 1.799340549 0.307692308 0.230769231 0.384615385 52 2 0 63 3R:10361396-10361509 7 jumu FBtr0082237 10360257 10361612 TGTGATG 7mer-m1 dme-miR-11-3p 3R + 10361370 10361556 3'utr jumu FlyBase G31520.1 AGGATGGCTGATGGAATTAAACCGTTTTTGTTATTACCCTTTTCTTTTGTGATGCTTCGACTTAGCTTGCGCATTTAACAATTCCATTTACGAACCAGGAACATTTATGCATTTTTTGTTGTAATATTAGCACCTAAATATTGTATTTAATCATTAAGTGAAGCTCTGTAAATCTTTAAGCTAAGAA 45 10361415 0.991478366 25 41 442 0.921875 1.469822016 0.375 0.311111111 0.515625 45 4 1 59 3R:10361370-10361556 7 22.5 1686 FBgn0015396 1426.553333 44.76666667 68.68333333 0.015772281 0.502606106 0.327590391 2 2 2 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 10399396 10399401 + 3R_10399396_10399401_+ 0.999649049 0.999930579 0.999789814 0.000199121 cwo FBtr0082246|FBtr0082246|FBtr0082246|FBtr0305152|FBtr0305152|FBtr0305152|FBtr0305151|FBtr0305151|FBtr0305151 10399337|10399337|10399337|10399337|10399337|10399337|10399337|10399337|10399337 10400752|10400752|10400752|10400752|10400752|10400752|10400752|10400752|10400752 3R + 10399279 10399422 stop_codon cwo FlyBase G41802.1 GTGGCCGCCGCAGCGGTGGCTAAGGCCAAACTGGAGCAGGCCATGAACCAGAGCTGGTAAAGCAAAGCAATCGCAATGCAATGGGTCGACAGATGGAACAACACTACCTCAGTACTTCTGTGAATAATCATTAAATGATTAATC 78 10399395 0.9785535 14 73 483 0.944444444 1.929418926 0.344444444 0.08974359 0.211111111 78 5 0 85 3R:10399279-10399422 6 cwo FBtr0305151|FBtr0305151|FBtr0305151|FBtr0082246|FBtr0082246|FBtr0082246|FBtr0305152|FBtr0305152|FBtr0305152 10399337|10399337|10399337|10399337|10399337|10399337|10399337|10399337|10399337 10400752|10400752|10400752|10400752|10400752|10400752|10400752|10400752|10400752 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 10399307 10399411 stop_codon cwo FlyBase G31537.1 AACTGGAGCAGGCCATGAACCAGAGCTGGTAAAGCAAAGCAATCGCAATGCAATGGGTCGACAGATGGAACAACACTACCTCAGTACTTCTGTGAATAATCATTA 38 10399395 0.976328673 13 35 224 0.896551724 1.716003344 0.24137931 0.421052632 0.620689655 38 6 0 52 3R:10399307-10399411 6 33 1687 FBgn0259938 1085.47 27.38 41.65666667 0.030401577 1.205259313 0.792190126 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 10817146 10817151 + 3R_10817146_10817151_+ 0.999512891 0.99964953 0.99958121 9.66E-05 CG4089 FBtr0082281|FBtr0082281|FBtr0082281 10817111|10817111|10817111 10817490|10817490|10817490 3R + 10817120 10817177 3'utr CG4089 FlyBase G41844.1 TAATTATCTTCTTATGTAAATACTTACTGTGACATGGTAACCTCTTATGCTCAGCATT 21 10817144 0.887322493 6 21 150 1 1.342422681 0.045454545 0.047619048 0.090909091 21 0 0 22 3R:10817120-10817177 6 CG4089 FBtr0082281|FBtr0082281|FBtr0082281 10817111|10817111|10817111 10817490|10817490|10817490 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 10817129 10817188 3'utr CG4089 FlyBase G31575.1 TCTTATGTAAATACTTACTGTGACATGGTAACCTCTTATGCTCAGCATTAGTTAATTGGC 19 10817144 0.982143272 9 19 132 1 1.491361694 0.225806452 0.421052632 0.64516129 19 0 0 31 3R:10817129-10817188 6 16.5 1688 FBgn0037838 56.27 3.373333333 5.153333333 0.293229074 4.891304348 3.201811125 2 2 2 0.25 dme-bantam-3p 6mer3-8 TGATCT 3R 10856097 10856102 + 3R_10856097_10856102_+ 0.999088727 0.999571858 0.999330293 0.000341674 CG4511 FBtr0302202|FBtr0082286 10855766|10855766 10856412|10856412 3R + 10856080 10856121 3'utr CG4511 FlyBase G41852.2 TAAGCGAACTCAAAATTTGATCTTTATGGTATTTGCAATTCC 37 10856096 0.671803122 10 37 337 1 1.602059991 0.375 0.081081081 0.15 37 0 0 40 3R:10856080-10856121 6 CG4511 FBtr0302202|FBtr0082286 10855766|10855766 10856412|10856412 TGATCT 6mer3-8 dme-bantam-3p 3R + 10856072 10856115 3'utr CG4511 FlyBase G31583.1 AGCGAGCTTAAGCGAACTCAAAATTTGATCTTTATGGTATTTGC 31 10856096 0.945136748 7 31 256 1 1.69019608 0.183673469 0.419354839 0.632653061 31 0 0 49 3R:10856072-10856115 6 31.5 1689 FBgn0037843 1348.566667 118.0666667 181.7 0.023358133 0.266798419 0.173362686 1 1 1 0.25 dme-bantam-3p 6mer3-8 TGATCT 3R 10857909 10857914 + 3R_10857909_10857914_+ 0.976840922 0.989124595 0.982982759 0.008685888 CG4570 FBtr0082287 10857844 10858066 3R + 10857890 10857920 3'utr CG4570 FlyBase G41860.1 TTGAAAATAACGACGTTCATGATCTTGTTTA 12 10857909 0.681254338 4 12 101 1 1.278753601 0 0.416666667 0.631578947 12 0 0 19 3R:10857890-10857920 6 CG4570 FBtr0082287 10857844 10858066 TGATCT 6mer3-8 dme-bantam-3p 3R + 10857897 10857922 3'utr CG4570 FlyBase G31587.1 TAACGACGTTCATGATCTTGTTTAAT 8 10857917 0.572137203 4 8 65 1 1.113943352 0 0.25 0.538461538 8 0 0 13 3R:10857897-10857922 6 10 1690 FBgn0037844 66 6.4 9.756666667 0.151515152 1.5625 1.024940212 0 -8 -4 0.25 dme-miR-965-3p 7mer-m8 TACGCTT 3R 10895356 10895362 + 3R_10895356_10895362_+ 0.601772596 0.609128141 0.605450369 0.005201124 Leash FBtr0082325 10895233 10896418 3R + 10895340 10895443 3'utr Leash FlyBase G41875.1 TATATCCTAGACCTTCTACGCTTCGAGCACAAACCATATGCAAATTGTGCACAAATCAAGTTATACGCTGATATACCCTATTTATGTTTACCTTTGATTTCACC 39 10895356 0.848308308 12 37 240 0.941176471 1.204119983 0.058823529 0.205128205 0.392156863 39 1 2 48 3R:10895340-10895443 7 Leash FBtr0082325 10895233 10896418 TACGCTT 7mer-m8 dme-miR-965-3p 3R + 10895339 10895376 3'utr Leash FlyBase G31600.1 ATATATCCTAGACCTTCTACGCTTCGAGCACAAACCAT 17 10895356 0.950258499 3 17 84 1 1.380211242 0.291666667 0.235294118 0.458333333 17 0 0 24 3R:10895339-10895376 7 21 1691 FBgn0037856 180.5566667 6.93 10.65333333 0.116306977 3.03030303 1.971214018 0 0 0 0.25 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 11212513 11212518 - 3R_11212513_11212518_- 0.76209504 0.709931671 0.736013355 0.036885023 ZnT86D FBtr0082371 11212306 11212867 3R - 11212499 11212537 3'utr ZnT86D FlyBase G50069.1 AAGCTAAGCGAAAGATTTTGTGCAAAGGTAAATATAAAT 7 11212520 0.839247432 3 6 35 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 3R:11212499-11212537 6 ZnT86D FBtr0082371 11212306 11212867 GTGCAA 6mer3-8 dme-miR-92b-3p 3R - 11212509 11212550 3'utr ZnT86D FlyBase G37860.1 TTAGTGTAATTGTAAGCTAAGCGAAAGATTTTGTGCAAAGGT 6 11212520 0.622986519 4 6 33 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 3R:11212509-11212550 6 4.5 1692 FBgn0037875 198.6666667 12.00333333 18.26333333 0.022651007 0.374895862 0.246395328 2 2 2 0.25 dme-bantam-3p 6mer3-8 TGATCT 3R 11212826 11212831 - 3R_11212826_11212831_- 0.514007181 0.665155546 0.589581364 0.106877988 ZnT86D FBtr0082371 11212306 11212867 3R - 11212811 11212859 3'utr ZnT86D FlyBase G50071.1 GGATCGACCCACCGGTGTCCTTGTACAATGATCTGTATAGTTATCAGCG 27 11212831 0.987790576 6 26 247 0.965517241 1.447158031 0.206896552 0.074074074 0.137931034 27 1 0 28 3R:11212811-11212859 6 ZnT86D FBtr0082371 11212306 11212867 TGATCT 6mer3-8 dme-bantam-3p 3R - 11212812 11212859 3'utr ZnT86D FlyBase G37862.1 GGATCGACCCACCGGTGTCCTTGTACAATGATCTGTATAGTTATCAGC 23 11212831 0.989071878 6 19 185 0.838709677 1.113943352 0.225806452 0.260869565 0.451612903 23 4 1 26 3R:11212812-11212859 6 24.5 1693 FBgn0037875 198.6666667 12.00333333 18.26333333 0.123322148 2.041099695 1.341485673 0 0 0 0.25 dme-miR-2a-2-5p 7mer-m1 GATGAGG 3R 11223253 11223259 + 3R_11223253_11223259_+ 0.676257732 0.812628345 0.744443038 0.096428576 RpL3 FBtr0302586 11223138 11224944 3R + 11223193 11223269 3'utr RpL3 FlyBase G41912.1 AAATTGCCTGACGAGTGAGCATGACAAGGAAGACTGCATCTCCGCTCGCCATTCGTTTGCGATGAGGCGCACTTCCT 10 11223249 0.95222705 7 10 48 1 1.113943352 0.076923077 0.3 0.461538462 10 0 0 13 3R:11223193-11223269 7 RpL3 FBtr0302586 11223138 11224944 GATGAGG 7mer-m1 dme-miR-2a-2-5p 3R + 11223223 11223264 3'utr RpL3 FlyBase G31633.1 AGACTGCATCTCCGCTCGCCATTCGTTTGCGATGAGGCGCAC 7 11223249 0.966904424 4 7 36 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 3R:11223223-11223264 7 6 1694 FBgn0020910 9247.463333 756.2966667 1140.143333 0.000648827 0.007933395 0.005262496 4 4 4 0.25 dme-miR-980-3p 6mer2-7 GCAGCT 3R 11230719 11230724 - 3R_11230719_11230724_- 0.991135996 0.992635072 0.991885534 0.001060024 CG17187 FBtr0082365 11230615 11230808 3R - 11230701 11230738 3'utr CG17187 FlyBase G50088.1 AATTTAGCAACTATGCAGCTGATTTATAATACATTTAC 22 11230726 0.833959911 4 22 145 1 1.556302501 0 0.363636364 0.611111111 22 0 0 36 3R:11230701-11230738 6 CG17187 FBtr0082365 11230615 11230808 GCAGCT 6mer2-7 dme-miR-980-3p 3R - 11230709 11230738 3'utr CG17187 FlyBase G37874.1 AATTTAGCAACTATGCAGCTGATTTATAAT 28 11230726 0.78404609 5 28 170 1 1.62324929 0 0.321428571 0.547619048 28 0 0 42 3R:11230709-11230738 6 25 1695 FBgn0037882 159.3333333 15.59 23.78333333 0.156903766 1.603592046 1.051156272 2 2 2 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3R 11232501 11232507 - 3R_11232501_11232507_- 0.821627601 0.823125574 0.822376587 0.001059246 Arfip FBtr0082364 11232427 11233081 3R - 11232455 11232538 3'utr Arfip FlyBase G50091.1 CGAGCTTGCATAATTTGAAATCATTGTTTTACTAGTCATCGTATTATTTACACTAAAATGAAGTCTATATATATATAAAAATAT 59 11232511 0.825922262 16 53 630 0.922077922 1.851258349 0.077922078 0.271186441 0.441558442 59 6 0 71 3R:11232455-11232538 7 Arfip FBtr0082364 11232427 11233081 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R - 11232460 11232550 3'utr Arfip FlyBase G37877.1 AAACTGTTTTTGCGAGCTTGCATAATTTGAAATCATTGTTTTACTAGTCATCGTATTATTTACACTAAAATGAAGTCTATATATATATAAA 54 11232510 0.800969827 19 47 529 0.91011236 1.607455023 0.224719101 0.462962963 0.674157303 54 7 1 81 3R:11232460-11232550 7 43.5 1696 FBgn0037884 616.2333333 37.68 58.01666667 0.070590144 1.154458599 0.749784545 4 3 3.5 0.25 dme-miR-8-3p 6mer3-8 CAGTAT 3R 11232927 11232932 - 3R_11232927_11232932_- 0.7007582 0.68464561 0.692701905 0.011393329 Arfip FBtr0082364 11232427 11233081 3R - 11232808 11232954 3'utr Arfip FlyBase G50095.1 AAGATCGGTGGCAGAGATGATTCAGTATGCGATGCAGTGGACAGAAACACTGCATGGCGAACCATAACAATATTTTCGTGCTAAGTTTAAGTCGAATTCCTAAGCCGTAAGCAGAAAGTGAGAGTGGTAGGTGTATGTTATTTATAT 83 11232934 0.979877153 13 74 527 0.888888889 1.903089987 0.3 0.084337349 0.155555556 83 10 0 80 3R:11232808-11232954 6 Arfip FBtr0082364 11232427 11233081 CAGTAT 6mer3-8 dme-miR-8-3p 3R - 11232876 11232953 3'utr Arfip FlyBase G37880.1 AGATCGGTGGCAGAGATGATTCAGTATGCGATGCAGTGGACAGAAACACTGCATGGCGAACCATAACAATATTTTCGT 66 11232934 0.981257469 8 58 418 0.894117647 1.403692338 0.552941176 0.212121212 0.388235294 66 7 2 76 3R:11232876-11232953 6 66 1697 FBgn0037884 616.2333333 37.68 58.01666667 0.107102288 1.751592357 1.137604137 2 2 2 0.25 dme-miR-283-5p 8mer-A1 TGATATTA 3R 11240079 11240086 + 3R_11240079_11240086_+ 0.277710177 0.491268066 0.384489122 0.151008239 CG31388 FBtr0304709|FBtr0082356 11238876|11240036 11240114|11240114 3R + 11240051 11240114 3'utr CG31388 FlyBase G41936.1 AGTTGCATGTTAATTATATATACCGAATTGATATTAATAAAGCTTCCGTTCCGCGTTCATGTTT 28 11240078 0.856489537 4 26 256 0.931034483 1.431363764 0.103448276 0.035714286 0.068965517 28 2 0 27 3R:11240051-11240114 8 CG31388 FBtr0082356|FBtr0304709 11240036|11238876 11240114|11240114 TGATATTA 8mer-A1 dme-miR-283-5p 3R + 11240051 11240109 3'utr CG31388 FlyBase G31650.1 AGTTGCATGTTAATTATATATACCGAATTGATATTAATAAAGCTTCCGTTCCGCGTTCA 20 11240078 0.981645834 2 20 150 1 1.531478917 0.323529412 0.5 0.705882353 20 0 0 34 3R:11240051-11240109 8 22.5 1698 FBgn0051388 90 7.313333333 11.29666667 0.25 3.07657247 1.991737976 1 1 1 0.25 dme-miR-283-5p 7mer-m8 TGATATT 3R 11242319 11242325 - 3R_11242319_11242325_- 0.552085703 0.556479796 0.55428275 0.003107098 CG17734 FBtr0082361|FBtr0082360|FBtr0308073 11242206|11242206|11242206 11242819|11242541|11243554 3R - 11242263 11242351 3'utr CG17734 FlyBase G50101.2 CAGTTTTGTAAACCTGCGTAAGATTGTGATATTGTGTGTTTTAATGTACAAGTTGAACATCCAAACGAAAGCTGTCGAAGCAGACGACA 85 11242328 0.97097103 9 79 680 0.920353982 1.318063335 0.513274336 0.282352941 0.460176991 85 5 4 104 3R:11242263-11242351 7 CG17734 FBtr0308073|FBtr0082360|FBtr0082361 11242206|11242206|11242206 11243554|11242541|11242819 TGATATT 7mer-m8 dme-miR-283-5p 3R - 11242305 11242343 3'utr CG17734 FlyBase G37885.1 TAAACCTGCGTAAGATTGTGATATTGTGTGTTTTAATGT 47 11242328 0.702732431 7 44 389 0.914285714 1.329058719 0.428571429 0.446808511 0.628571429 47 4 2 64 3R:11242305-11242343 7 63 1699 FBgn0037890 228.3333333 38.00666667 58.52666667 0.275912409 1.657603929 1.076432395 3 3 3 0.25 dme-miR-184-5p 6mer3-8 TGATAA 3R 11348467 11348472 - 3R_11348467_11348472_- 0.694721631 0.9863846 0.840553115 0.206236885 KP78a FBtr0301426 11346292 11348527 3R - 11348429 11348519 5'utr KP78a FlyBase G50109.1 CGGGTTGTTTGGGGCAATGTCAAGGTGATAGAGATAGAATGATAGAGTGATAAAGAAAGTGATACAGTCGGCCCTGACCGAGCATTCTAAC 42 11348445 0.962122559 11 34 173 0.803921569 1.135662602 0.215686275 0.214285714 0.352941176 42 8 2 41 3R:11348429-11348519 6 KP78a FBtr0301426 11346292 11348527 TGATAA 6mer3-8 dme-miR-184-5p 3R - 11348434 11348509 5'utr KP78a FlyBase G37890.1 GGGGCAATGTCAAGGTGATAGAGATAGAATGATAGAGTGATAAAGAAAGTGATACAGTCGGCCCTGACCGAGCATT 40 11348474 0.96677576 9 30 159 0.803278689 1.213074825 0.295081967 0.4 0.606557377 40 10 2 49 3R:11348434-11348509 6 28 1700 FBgn0026064 259.0966667 6.236666667 9.53 0.108067774 4.489577766 2.938090241 -27 2 -12.5 0.25 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 11466578 11466585 + 3R_11466578_11466585_+ 0.62434977 0.624804248 0.624577009 0.000321309 CG17230 FBtr0339376 11465566 11467372 3R + 11466561 11466601 3'utr CG17230 FlyBase G41999.1 TGATATCTGCATTTGTTTCCGTCCAGAGTCGAGCCATCGAA 38 11466577 0.71232571 2 37 301 0.975609756 1.602059991 0.097560976 0.078947368 0.146341463 38 1 0 40 3R:11466561-11466601 8 CG17230 FBtr0339376 11465566 11467372 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R + 11466562 11466597 3'utr CG17230 FlyBase G31688.1 GATATCTGCATTTGTTTCCGTCCAGAGTCGAGCCAT 14 11466577 0.700897143 2 14 113 1 1.322219295 0.142857143 0.5 0.666666667 14 0 0 21 3R:11466562-11466597 8 26 1701 FBgn0046225 82.24 4.006666667 6.103333333 0.31614786 6.489184692 4.259967231 1 1 1 0.25 dme-miR-92b-3p 7mer-A1 TGCAATA 3R 11560055 11560061 - 3R_11560055_11560061_- 0.705263062 0.710329424 0.707796243 0.003582415 sea FBtr0100462|FBtr0100465|FBtr0100461|FBtr0100464 11559894|11559894|11559894|11559894 11560164|11560164|11560164|11560164 3R - 11559961 11560111 3'utr sea FlyBase G50134.1 AAACCCACTCGTGCATTTTCCTCTGTTCCCATTGTTCCCTAGTCGACTGTTGCAATAGTTTCTAGTTTTGTGACATATTCCAAGAAAGCATTTTATATACACTCTATACCCGCAATGGGTAAGTGGCTATAGAAATTATACAGCTTGTTTT 43 11560062 0.985722729 20 43 362 1 1.707570176 0.176470588 0.186046512 0.31372549 43 0 0 51 3R:11559961-11560111 7 sea FBtr0100461|FBtr0100464|FBtr0100462|FBtr0100465 11559894|11559894|11559894|11559894 11560164|11560164|11560164|11560164 TGCAATA 7mer-A1 dme-miR-92b-3p 3R - 11560028 11560114 3'utr sea FlyBase G37915.1 AAAAAACCCACTCGTGCATTTTCCTCTGTTCCCATTGTTCCCTAGTCGACTGTTGCAATAGTTTCTAGTTTTGTGACATATTCCAAG 20 11560062 0.988905702 10 18 173 0.923076923 1.380211242 0.115384615 0.3 0.461538462 20 2 0 24 3R:11560028-11560114 7 20 1702 FBgn0037912 356.1766667 26.12 39.85 0.05615191 0.765696784 0.501882058 1 1 1 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 11575748 11575753 + 3R_11575748_11575753_+ 0.949985277 0.910504048 0.930244663 0.027917495 Mrp4 FBtr0302027 11575669 11575937 3R + 11575633 11575845 lincRNA_intron-lincRNA_exon Mrp4 FlyBase G42027.1 AGGCTCATTTGGAATCAATGAAACCGAAATCGGAGTAGATTAAGCATCTGGTTATTGGTTACTAAACTGGGAGCCAACAAGGTCTCATTTCCTGGCTGTAAGCGTCTTCAAAGTTGTACCTAATCCAGTCAGCTGCATTTAAGCTAGTTTTCTACTTAAAGTATTATGCCTTCGAACCGTACATACTTGTATAACTCAATCCTTATAGATATA 573 11575724 0.838123886 37 543 4331 0.951145038 2.016336796 0.198473282 0.115183246 0.225954198 573 27 5 623 3R:11575633-11575845 6 Mrp4 FBtr0302027 11575669 11575937 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 11575633 11575849 lincRNA_intron-lincRNA_exon Mrp4 FlyBase G31713.1 AGGCTCATTTGGAATCAATGAAACCGAAATCGGAGTAGATTAAGCATCTGGTTATTGGTTACTAAACTGGGAGCCAACAAGGTCTCATTTCCTGGCTGTAAGCGTCTTCAAAGTTGTACCTAATCCAGTCAGCTGCATTTAAGCTAGTTTTCTACTTAAAGTATTATGCCTTCGAACCGTACATACTTGTATAACTCAATCCTTATAGATATACTAT 380 11575724 0.765042843 42 364 2866 0.955035971 2.424064525 0.284172662 0.339473684 0.548561151 380 24 1 531 3R:11575633-11575849 6 173 1703 FBgn0263316 1433.733333 36.35333333 55.55 0.120664001 4.75884834 3.114311431 24 24 24 0.25 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 11585088 11585094 + 3R_11585088_11585094_+ 0.658401374 0.658668929 0.658535152 0.000189151 wkd FBtr0082413|FBtr0082414 11584642|11584642 11585305|11585305 3R + 11585004 11585227 3'utr wkd FlyBase G42038.1 GCGTAACATTTAAAACCGTAGCGTTAGCTTTGAGTTGAGGACCCCGAACATATCGTATGATTATCATGATGATTACCACCCTGAGGCAGCTGACACAAGGACTGGAGGATTATATAGTTTGAAACTTTGACTACTTTATCCGTATTAACTCTGAGACGAGAATGTTGATATTTACCTACGATAATGCGTTACGAACGACTTCTGTTGTGCCCCCGAGCCTGAAA 160 11585085 0.975565849 39 149 925 0.943589744 1.787696568 0.143589744 0.16875 0.317948718 160 9 2 184 3R:11585004-11585227 7 wkd FBtr0082413|FBtr0082414 11584642|11584642 11585305|11585305 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 11585004 11585179 3'utr wkd FlyBase G31719.1 GCGTAACATTTAAAACCGTAGCGTTAGCTTTGAGTTGAGGACCCCGAACATATCGTATGATTATCATGATGATTACCACCCTGAGGCAGCTGACACAAGGACTGGAGGATTATATAGTTTGAAACTTTGACTACTTTATCCGTATTAACTCTGAGACGAGAATGTTGATATTTACC 144 11585085 0.837263679 27 130 815 0.928571429 1.444936571 0.19047619 0.326388889 0.538095238 144 9 6 195 3R:11585004-11585179 7 62 1704 FBgn0037917 354.31 20.74 31.50666667 0.174988005 2.989392478 1.967837495 3 3 3 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 11673703 11673709 + 3R_11673703_11673709_+ 0.789217732 0.791073503 0.790145617 0.001312249 CG42327 FBtr0299789|FBtr0299789|FBtr0299789 11673461|11673461|11673461 11673974|11673974|11673974 3R + 11673690 11673720 3'utr CG42327 FlyBase G42072.1 ATTCCTTTATTATTGTGATATAATCGTACAT 9 11673702 0.680148299 2 9 97 1 1.079181246 0 0.222222222 0.416666667 9 0 0 12 3R:11673690-11673720 7 CG42327 FBtr0299789|FBtr0299789|FBtr0299789 11673461|11673461|11673461 11673974|11673974|11673974 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 11673686 11673721 3'utr CG42327 FlyBase G31753.1 ATGTATTCCTTTATTATTGTGATATAATCGTACATT 12 11673702 0.689120412 4 11 137 0.9 1.255272505 0.15 0.5 0.7 12 2 0 18 3R:11673686-11673721 7 10.5 1705 FBgn0259227 1487.13 32.72666667 50.52333333 0.00706058 0.320839275 0.207824767 1 1 1 0.25 dme-miR-184-5p 6mer3-8 TGATAA 3R 11743989 11743994 + 3R_11743989_11743994_+ 0.924420373 0.997372892 0.960896632 0.051585207 CG14722 FBtr0082431 11743724 11744027 3R + 11743979 11744016 3'utr CG14722 FlyBase G42095.1 GAAATGTTATTGATAATAGAACTGATTTAAAATAAAAT 11 11743990 0.690436529 5 11 85 1 1.113943352 0 0.181818182 0.307692308 11 0 0 13 3R:11743979-11744016 6 CG14722 FBtr0082431 11743724 11744027 TGATAA 6mer3-8 dme-miR-184-5p 3R + 11743934 11744017 3'utr CG14722 FlyBase G31775.1 AATCCCTAATATGTTGGACGAAGATTTTACACAAAGTTTCACAATGAAATGTTATTGATAATAGAACTGATTTAAAATAAAATA 17 11743992 0.984957361 10 16 123 0.958333333 1.361727836 0.166666667 0.352941176 0.541666667 17 1 0 23 3R:11743934-11744017 6 11.5 1706 FBgn0037943 542.9533333 32.08666667 49.30666667 0.021180457 0.358404322 0.233234181 -1 -3 -2 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 11744632 11744638 - 3R_11744632_11744638_- 0.518839176 0.689539512 0.604189344 0.12070334 CG6923 FBtr0330169|FBtr0330169|FBtr0330169|FBtr0082433|FBtr0082433|FBtr0082433|FBtr0082432|FBtr0082432|FBtr0082432|FBtr0307892|FBtr0307892|FBtr0307892 11744481|11744481|11744481|11744481|11744481|11744481|11744227|11744227|11744227|11744481|11744481|11744481 11744911|11744911|11744911|11744938|11744938|11744938|11744938|11744938|11744938|11744938|11744938|11744938 3R - 11744625 11744649 3'utr CG6923 FlyBase G50234.1 AACAAAATTCTTGTGATAAGAATTT 5 11744638 0.628718048 2 4 32 1 0.698970004 0 0 0 5 0 0 5 3R:11744625-11744649 7 CG6923 FBtr0082432|FBtr0082432|FBtr0082432|FBtr0307892|FBtr0307892|FBtr0307892|FBtr0330169|FBtr0330169|FBtr0330169|FBtr0082433|FBtr0082433|FBtr0082433 11744227|11744227|11744227|11744481|11744481|11744481|11744481|11744481|11744481|11744481|11744481|11744481 11744938|11744938|11744938|11744938|11744938|11744938|11744911|11744911|11744911|11744938|11744938|11744938 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 11744626 11744714 3'utr CG6923 FlyBase G37989.1 AAGTATATTAAGTGATTCGGCAAATAATTTCCTATACATATGTACAAATTGTCTACGTTTTGTGAAACAAAATTCTTGTGATAAGAATT 12 11744640 0.989360084 8 9 86 0.8125 1.113943352 0.125 0.333333333 0.5 12 3 0 13 3R:11744626-11744714 7 4 1707 FBgn0037944 206.3266667 5.293333333 8.143333333 0.019386733 0.755667506 0.491199345 0 2 1 0.25 dme-miR-14-3p 7mer-A1 AGACTGA 3R 11744898 11744904 - 3R_11744898_11744904_- 0.571161568 0.666288153 0.618724861 0.067264664 CG6923 FBtr0330169|FBtr0082433|FBtr0082432|FBtr0307892 11744481|11744481|11744227|11744481 11744911|11744938|11744938|11744938 3R - 11744883 11744936 stop_codon CG6923 FlyBase G50237.1 TTGTGTGCACGGCATCTTTATGTAAATCCCTCAGACTGAGTTTGTTCTCGGCAT 49 11744906 0.982589196 7 42 319 0.842105263 0.903089987 0.087719298 0.12244898 0.245614035 49 4 5 48 3R:11744883-11744936 7 CG6923 FBtr0082432|FBtr0307892|FBtr0330169|FBtr0082433 11744227|11744481|11744481|11744481 11744938|11744938|11744911|11744938 AGACTGA 7mer-A1 dme-miR-14-3p 3R - 11744883 11744917 stop_codon CG6923 FlyBase G37990.1 ATGTAAATCCCTCAGACTGAGTTTGTTCTCGGCAT 24 11744906 0.868775497 3 24 139 1 1.491361694 0.032258065 0.25 0.419354839 24 0 0 31 3R:11744883-11744917 7 35.5 1708 FBgn0037944 206.3266667 5.293333333 8.143333333 0.172057255 6.706549118 4.359394187 2 2 2 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 11751836 11751842 - 3R_11751836_11751842_- 0.57548307 0.533332065 0.554407567 0.029805258 Lk6 FBtr0082534|FBtr0082534|FBtr0082534 11750929|11750929|11750929 11752971|11752971|11752971 3R - 11751712 11751867 3'utr Lk6 FlyBase G50256.1 CATACACCTATAATATTTAAAAAATTGTGATATAAAATGTAAATGTAAATGCACCTGAAGAAATCTATCTATCAAATGACGCTGTGCCATCAACAACCACTTCAATCTACTGATAAGAGGAGTATCATTTTCCACAGACCTTATTTGTTTACGTCC 80 11751843 0.981087449 18 76 625 0.955555556 1.457377197 0.022222222 0.1125 0.211111111 80 2 2 86 3R:11751712-11751867 7 Lk6 FBtr0082534|FBtr0082534|FBtr0082534 11750929|11750929|11750929 11752971|11752971|11752971 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 11751745 11751861 3'utr Lk6 FlyBase G37998.1 CCTATAATATTTAAAAAATTGTGATATAAAATGTAAATGTAAATGCACCTGAAGAAATCTATCTATCAAATGACGCTGTGCCATCAACAACCACTTCAATCTACTGATAAGAGGAGT 68 11751843 0.985836117 13 63 524 0.926315789 1.467361417 0 0.308823529 0.505263158 68 5 2 88 3R:11751745-11751861 7 55 1709 FBgn0017581 12415.55667 253.5666667 388.6133333 0.004429926 0.216905482 0.141528855 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 11781589 11781595 - 3R_11781589_11781595_- 0.666293519 0.660381366 0.663337443 0.004180486 CG17360 FBtr0082531|FBtr0082531|FBtr0082531|FBtr0333819|FBtr0333819|FBtr0333819 11781129|11781129|11781129|11781129|11781129|11781129 11781819|11781819|11781819|11781819|11781819|11781819 3R - 11781519 11781658 3'utr CG17360 FlyBase G50296.1 TGCGTGCCTCCGCTTGACTCATTCATTCGTTTGCGCTTAGTAACATCTCATTTGAATAATTTTTGTGATATTAAACTTAAAGTCGCTGATCTTTGGTATGCTCTTTTGTAGGATATTTAGTTTCTATTGATTTTCTACAT 167 11781597 0.910691985 30 153 1641 0.909090909 1.67669361 0.224880383 0.221556886 0.377990431 167 16 3 190 3R:11781519-11781658 7 CG17360 FBtr0333819|FBtr0333819|FBtr0333819|FBtr0082531|FBtr0082531|FBtr0082531 11781129|11781129|11781129|11781129|11781129|11781129 11781819|11781819|11781819|11781819|11781819|11781819 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 11781530 11781663 3'utr CG17360 FlyBase G38028.1 TGTAATGCGTGCCTCCGCTTGACTCATTCATTCGTTTGCGCTTAGTAACATCTCATTTGAATAATTTTTGTGATATTAAACTTAAAGTCGCTGATCTTTGGTATGCTCTTTTGTAGGATATTTAGTTTCTATTG 100 11781597 0.746402167 24 91 974 0.919708029 2.100370545 0.116788321 0.29 0.481751825 100 11 0 126 3R:11781530-11781663 7 57.5 1710 FBgn0037949 382.3133333 8.926666667 13.76333333 0.150400195 6.44137416 4.177767014 2 2 2 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 3R 11789463 11789470 - 3R_11789463_11789470_- 0.635440425 0.642938302 0.639189363 0.005301816 Sbf FBtr0082529|FBtr0082530 11789291|11789291 11789928|11789928 3R - 11789369 11789492 3'utr Sbf FlyBase G50302.1 TATATAGGTTTATAGTGAATTTACCAAAGAATATTCCACCTTTGTTGCGCAATTGAAATGCATTTCTTGATTGCTTCCTTTAAACTAAACCCTATTATTAAACGCTTTCCTTTATTTATACACT 131 11789441 0.874316674 18 123 1075 0.953333333 1.854306042 0.326666667 0.106870229 0.22 131 6 1 143 3R:11789369-11789492 8 Sbf FBtr0082529|FBtr0082530 11789291|11789291 11789928|11789928 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 11789403 11789493 3'utr Sbf FlyBase G38031.1 CTATATAGGTTTATAGTGAATTTACCAAAGAATATTCCACCTTTGTTGCGCAATTGAAATGCATTTCTTGATTGCTTCCTTTAAACTAAAC 64 11789471 0.852379275 16 64 514 1 1.934498451 0.197674419 0.234375 0.430232558 64 0 0 86 3R:11789403-11789493 8 49.5 1711 FBgn0025802 636.01 11.3 17.24 0.077828965 4.380530973 2.871229698 -29 1 -14 0.25 dme-miR-184-5p 6mer3-8 TGATAA 3R 11789576 11789581 - 3R_11789576_11789581_- 0.624326527 0.940923513 0.78262502 0.223867886 Sbf FBtr0082529|FBtr0082530 11789291|11789291 11789928|11789928 3R - 11789545 11789635 3'utr Sbf FlyBase G50303.1 ATGTAAAGAAACTATAAAATTATGTGATTATATAAACAAACAAAAATCAGACTATGATAAATTTACGATAAAATGGAAAAGCCACGCCCGC 27 11789589 0.976840609 9 26 167 0.966666667 1.462397998 0.033333333 0.111111111 0.2 27 1 0 29 3R:11789545-11789635 6 Sbf FBtr0082529|FBtr0082530 11789291|11789291 11789928|11789928 TGATAA 6mer3-8 dme-miR-184-5p 3R - 11789562 11789624 3'utr Sbf FlyBase G38032.1 CTATAAAATTATGTGATTATATAAACAAACAAAAATCAGACTATGATAAATTTACGATAAAAT 14 11789589 0.979362188 7 12 83 0.913043478 1.322219295 0 0.5 0.695652174 14 2 0 21 3R:11789562-11789624 6 9 1712 FBgn0025802 636.01 11.3 17.24 0.014150721 0.796460177 0.522041763 8 8 8 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3R 11789607 11789613 - 3R_11789607_11789613_- 0.432327644 0.331115969 0.381721807 0.071567409 Sbf FBtr0082529|FBtr0082530 11789291|11789291 11789928|11789928 3R - 11789545 11789635 3'utr Sbf FlyBase G50303.1 ATGTAAAGAAACTATAAAATTATGTGATTATATAAACAAACAAAAATCAGACTATGATAAATTTACGATAAAATGGAAAAGCCACGCCCGC 27 11789616 0.976840609 9 26 167 0.966666667 1.462397998 0.033333333 0.111111111 0.2 27 1 0 29 3R:11789545-11789635 7 Sbf FBtr0082529|FBtr0082530 11789291|11789291 11789928|11789928 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 11789562 11789624 3'utr Sbf FlyBase G38032.1 CTATAAAATTATGTGATTATATAAACAAACAAAAATCAGACTATGATAAATTTACGATAAAAT 14 11789589 0.979362188 7 12 83 0.913043478 1.322219295 0 0.5 0.695652174 14 2 0 21 3R:11789562-11789624 7 10.5 1713 FBgn0025802 636.01 11.3 17.24 0.016509174 0.92920354 0.609048724 3 -24 -10.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 11964971 11964978 - 3R_11964971_11964978_- 0.648672672 0.648585932 0.648629302 6.14E-05 CG12213 FBtr0334155|FBtr0334155|FBtr0334155|FBtr0113223|FBtr0113223|FBtr0113223|FBtr0334156|FBtr0334156|FBtr0334156 11964672|11964672|11964672|11964672|11964672|11964672|11964672|11964672|11964672 11965424|11965424|11965424|11965424|11965424|11965424|11965424|11965424|11965424 3R - 11964929 11965003 3'utr CG12213 FlyBase G50394.1 AAATATACTCTATATACTTGGTTTTCTGTGATAAAAATAAACGCTGCGCTGCATTTGGGCAATGTTGCCTGTTTT 304 11964980 0.709617965 17 279 2986 0.915068493 1.62065648 0.046575342 0.151315789 0.293150685 304 24 7 334 3R:11964929-11965003 8 CG12213 FBtr0334156|FBtr0334156|FBtr0334156|FBtr0113223|FBtr0113223|FBtr0113223|FBtr0334155|FBtr0334155|FBtr0334155 11964672|11964672|11964672|11964672|11964672|11964672|11964672|11964672|11964672 11965424|11965424|11965424|11965424|11965424|11965424|11965424|11965424|11965424 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 11964943 11965031 3'utr CG12213 FlyBase G38088.1 TTGCTAAATCCTTACAAGTTTCATTAACAAATATACTCTATATACTTGGTTTTCTGTGATAAAAATAAACGCTGCGCTGCATTTGGGCA 178 11964980 0.692796783 15 163 1662 0.931174089 2.06069784 0.052631579 0.275280899 0.477732794 178 16 1 230 3R:11964943-11965031 8 230.5 1714 FBgn0260742 1391.876667 80.28333333 122.6666667 0.165603753 2.871081586 1.879076087 2 2 2 0.25 dme-miR-14-3p 7mer-m8 AAGACTG 3R 11965085 11965091 - 3R_11965085_11965091_- 0.669015239 0.670609161 0.6698122 0.001127128 CG12213 FBtr0334155|FBtr0113223|FBtr0334156 11964672|11964672|11964672 11965424|11965424|11965424 3R - 11965012 11965152 3'utr CG12213 FlyBase G50395.1 CTCGCAGGAAATACAATACTCTGAGATGGAGCTACGAACAAATGCAGACAGATTTAAAATGAAGACTGTTTCAGTTCTGCCTTGCAAATTATTAGTCCCGAATTAGCAGTAATCGAAATCGTTGCTAAATCCTTACAAGTT 33 11965094 0.974567835 18 32 197 0.977272727 1.633468456 0.113636364 0.272727273 0.454545455 33 1 0 43 3R:11965012-11965152 7 CG12213 FBtr0334156|FBtr0113223|FBtr0334155 11964672|11964672|11964672 11965424|11965424|11965424 AAGACTG 7mer-m8 dme-miR-14-3p 3R - 11965066 11965207 3'utr CG12213 FlyBase G38089.1 AACGTCATGACTACCATCATTTCGTTAATAGCAAATGAAGAACAAGAAATTAAAACTCGCAGGAAATACAATACTCTGAGATGGAGCTACGAACAAATGCAGACAGATTTAAAATGAAGACTGTTTCAGTTCTGCCTTGCAA 23 11965084 0.976204513 13 22 143 0.96875 1.491361694 0.15625 0.347826087 0.53125 23 1 0 31 3R:11965066-11965207 7 11 1715 FBgn0260742 1391.876667 80.28333333 122.6666667 0.007902999 0.137014739 0.089673913 3 -7 -2 0.25 dme-miR-304-5p 6mer3-8 TGAGAT 3R 11965126 11965131 - 3R_11965126_11965131_- 0.988735519 0.687809121 0.83827232 0.212787098 CG12213 FBtr0334155|FBtr0113223|FBtr0334156 11964672|11964672|11964672 11965424|11965424|11965424 3R - 11965012 11965152 3'utr CG12213 FlyBase G50395.1 CTCGCAGGAAATACAATACTCTGAGATGGAGCTACGAACAAATGCAGACAGATTTAAAATGAAGACTGTTTCAGTTCTGCCTTGCAAATTATTAGTCCCGAATTAGCAGTAATCGAAATCGTTGCTAAATCCTTACAAGTT 33 11965131 0.974567835 18 32 197 0.977272727 1.633468456 0.113636364 0.272727273 0.454545455 33 1 0 43 3R:11965012-11965152 6 CG12213 FBtr0334156|FBtr0113223|FBtr0334155 11964672|11964672|11964672 11965424|11965424|11965424 TGAGAT 6mer3-8 dme-miR-304-5p 3R - 11965066 11965207 3'utr CG12213 FlyBase G38089.1 AACGTCATGACTACCATCATTTCGTTAATAGCAAATGAAGAACAAGAAATTAAAACTCGCAGGAAATACAATACTCTGAGATGGAGCTACGAACAAATGCAGACAGATTTAAAATGAAGACTGTTTCAGTTCTGCCTTGCAA 23 11965128 0.976204513 13 22 143 0.96875 1.491361694 0.15625 0.347826087 0.53125 23 1 0 31 3R:11965066-11965207 6 8.5 1716 FBgn0260742 1391.876667 80.28333333 122.6666667 0.006106863 0.105875026 0.069293478 0 -3 -1.5 0.25 dme-miR-305-5p 7mer-m1 GTACAAT 3R 12014686 12014692 + 3R_12014686_12014692_+ 0.765282279 0.737834227 0.751558253 0.019408738 GCC185 FBtr0113224 12014585 12015059 3R + 12014675 12014695 3'utr GCC185 FlyBase G42163.1 CTGTAAATCTTGTACAATTTC 5 12014685 0.607191249 4 5 40 1 0.903089987 0 0.6 0.75 5 0 0 8 3R:12014675-12014695 7 GCC185 FBtr0113224 12014585 12015059 GTACAAT 7mer-m1 dme-miR-305-5p 3R + 12014674 12014696 3'utr GCC185 FlyBase G31820.1 TCTGTAAATCTTGTACAATTTCC 6 12014684 0.670810293 3 5 48 0.875 0.84509804 0 0.333333333 0.5 6 1 0 7 3R:12014674-12014696 7 5.5 1717 FBgn0037979 856.9066667 25.72 39.52333333 0.006418435 0.213841369 0.139158303 1 2 1.5 0.25 dme-bantam-3p 6mer3-8 TGATCT 3R 12015178 12015183 - 3R_12015178_12015183_- 0.969006192 0.973903425 0.971454808 0.003462843 CG3313 FBtr0335433|FBtr0082555 12014941|12014941 12015246|12015246 3R - 12015162 12015199 3'utr CG3313 FlyBase G50438.1 GTAGTTATTCGACTTGTGATCTTTAATCTTTTGGCGCA 33 12015184 0.643515628 5 31 345 0.952380952 1.124938737 0.214285714 0.212121212 0.380952381 33 0 2 40 3R:12015162-12015199 6 CG3313 FBtr0335433|FBtr0082555 12014941|12014941 12015246|12015246 TGATCT 6mer3-8 dme-bantam-3p 3R - 12015163 12015197 3'utr CG3313 FlyBase G38113.1 AGTTATTCGACTTGTGATCTTTAATCTTTTGGCGC 20 12015179 0.615368066 6 18 186 0.961538462 1.397940009 0 0.315789474 0.5 19 1 0 25 3R:12015163-12015197 6 26 1718 FBgn0037980 81.43333333 5.28 7.943333333 0.319279574 4.924242424 3.273185061 1 -4 -1.5 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 12068947 12068954 - 3R_12068947_12068954_- 0.32449627 0.30776965 0.31613296 0.011827563 ATP8B FBtr0339645|FBtr0339646|FBtr0300351|FBtr0307016|FBtr0307015|FBtr0339644|FBtr0339643 12068373|12068373|12068373|12068373|12068373|12068373|12068373 12069582|12069582|12069582|12069582|12069582|12069582|12069582 3R - 12068806 12069119 3'utr ATP8B FlyBase G50444.1 ATACCCAAACTCCTCAAAAAAGCACAAAAATCCCTTCTCGCGTATTTATATCATCGTTGACTGCATTTAAGAGAGTGAGCCCCCTGAATGATTGATTGTGTGGTTGGTTTTGAGGACTTAGAATAGGTTATATTAAGTTTATACTGTCTTTGGGAAACTGAAAGTGTACTTAATTGCTTAAATATGTGCTGTGTGCTTAGCCAATATAACTGCGGTGCTTGCCACCGATCAGAGTAGCTTATCTACAAATAGCTGAACGAACTCTCGTCTCAAAGTCCAATGCTATATGCTATATACCATATACTACCCCCAAC 933 12068955 0.986438504 62 912 7764 0.976525822 2.238882089 0.36713615 0.120042872 0.229107981 933 20 5 1040 3R:12068806-12069119 8 ATP8B FBtr0339643|FBtr0339644|FBtr0307015|FBtr0307016|FBtr0300351|FBtr0339646|FBtr0339645 12068373|12068373|12068373|12068373|12068373|12068373|12068373 12069582|12069582|12069582|12069582|12069582|12069582|12069582 GTACTTAA 8mer-A1 dme-miR-252-5p 3R - 12068886 12069078 3'utr ATP8B FlyBase G38118.1 GTATTTATATCATCGTTGACTGCATTTAAGAGAGTGAGCCCCCTGAATGATTGATTGTGTGGTTGGTTTTGAGGACTTAGAATAGGTTATATTAAGTTTATACTGTCTTTGGGAAACTGAAAGTGTACTTAATTGCTTAAATATGTGCTGTGTGCTTAGCCAATATAACTGCGGTGCTTGCCACCGATCAGAG 720 12068955 0.895378629 40 693 5933 0.964545455 2.071472874 0.398181818 0.375521558 0.591818182 719 31 8 1061 3R:12068886-12069078 8 486 1719 FBgn0037989 9025.686667 173.8733333 265.4733333 0.053846319 2.795138223 1.830692348 1 1 1 0.25 dme-miR-965-3p 7mer-A1 ACGCTTA 3R 12411560 12411566 + 3R_12411560_12411566_+ 0.823169167 0.774623914 0.798896541 0.034326711 CG5196 FBtr0082585|FBtr0082584 12411468|12411468 12411768|12411768 3R + 12411491 12411594 3'utr CG5196 FlyBase G42196.1 TCGATGGCATTCTGTGCCACATTCGGCTTGTATATAGAATTAGATTCCGCTTGGAGACTCGACTGTTTAACGCTTAGCCAGGCCGTCATCCCGTTTACTCTGTT 63 12411557 0.666139571 14 57 417 0.930555556 1.826074803 0.180555556 0.111111111 0.222222222 63 5 0 67 3R:12411491-12411594 7 CG5196 FBtr0082585|FBtr0082584 12411468|12411468 12411768|12411768 ACGCTTA 7mer-A1 dme-miR-965-3p 3R + 12411512 12411562 3'utr CG5196 FlyBase G31842.1 TTCGGCTTGTATATAGAATTAGATTCCGCTTGGAGACTCGACTGTTTAACG 42 12411556 0.968215978 7 39 266 0.956521739 1.819543936 0.072463768 0.523809524 0.710144928 42 3 0 66 3R:12411512-12411562 3 20.5 1720 FBgn0038039 509 36.03 54.94 0.040275049 0.568970303 0.373134328 3 4 3.5 0.25 dme-miR-33-5p 8mer-A1 CAATGCAA 3R 12421149 12421156 + 3R_12421149_12421156_+ 0.625422866 0.619297813 0.622360339 0.0043311 pps FBtr0304744|FBtr0082586 12420906|12420906 12421251|12421251 3R + 12421110 12421214 3'utr pps FlyBase G42215.1 AACCCGCCCCGAGCTCCAAATGGATCATCCTTCGCATTGCAATGCAAATTTAGATTCGGTTTTTACATTACGCTCTAACAAATCGTGTACATTTCCTCCGAAAAT 41 12421146 0.985695043 12 40 335 1 1.672097858 0.042553191 0.146341463 0.255319149 41 0 0 47 3R:12421110-12421214 8 pps FBtr0304744|FBtr0082586 12420906|12420906 12421251|12421251 CAATGCAA 8mer-A1 dme-miR-33-5p 3R + 12421124 12421190 3'utr pps FlyBase G31855.1 TCCAAATGGATCATCCTTCGCATTGCAATGCAAATTTAGATTCGGTTTTTACATTACGCTCTAACAA 25 12421145 0.776797677 10 24 214 0.911764706 1.491361694 0.176470588 0.28 0.470588235 25 3 0 31 3R:12421124-12421190 8 19.5 1721 FBgn0082831 827.4033333 14.92333333 22.97333333 0.023567708 1.306678579 0.848810215 3 4 3.5 0.25 dme-miR-79-3p 6mer2-7 AGCTTT 3R 12458370 12458375 + 3R_12458370_12458375_+ 0.929848356 0.999823251 0.964835803 0.049479726 trus FBtr0082634 12458206 12458444 3R + 12458309 12458386 3'utr trus FlyBase G42260.1 AAAGCTAAGCTTCTCGATTGTCCTAGGAAGATTTTATGCTCTAGTTGTTAAGAACGTTGTAAGCTTTTAGACACTCCA 10 12458367 0.987154186 8 9 81 1 1 0.1 0 0 10 0 0 10 3R:12458309-12458386 6 trus FBtr0082634 12458206 12458444 AGCTTT 6mer2-7 dme-miR-79-3p 3R + 12458358 12458386 3'utr trus FlyBase G31901.1 AAGAACGTTGTAAGCTTTTAGACACTCCA 6 12458376 0.858390259 4 6 35 1 0.77815125 0 0 0 6 0 0 6 3R:12458358-12458386 6 4.5 1722 FBgn0038055 142.6666667 10.03 15.44333333 0.031542056 0.448654038 0.29138787 3 -6 -1.5 0.25 dme-bantam-3p 6mer3-8 TGATCT 3R 12511283 12511288 + 3R_12511283_12511288_+ 0.572961703 0.804413904 0.688687804 0.16366142 Hsp70Bc FBtr0082638 12511242 12511461 3R + 12511258 12511363 3'utr Hsp70Bc FlyBase G42295.1 TTATTTCGGCTTAAGTTTTTAAAAGTGATCTTAATAGTTGAGTGCCATAAAAAAATGTACATATCTTCAACTATAGTATTATACTCATATGTTAGCAACCCATTGT 190 12511283 0.842225106 22 173 1799 0.915178571 2.311753861 0.375 0.136842105 0.267857143 190 19 0 205 3R:12511258-12511363 6 Hsp70Bc FBtr0082638 12511242 12511461 TGATCT 6mer3-8 dme-bantam-3p 3R + 12511262 12511417 3'utr Hsp70Bc FlyBase G31924.1 TTCGGCTTAAGTTTTTAAAAGTGATCTTAATAGTTGAGTGCCATAAAAAAATGTACATATCTTCAACTATAGTATTATACTCATATGTTAGCAACCCATTGTTTTAACTACAAATAATAGCAAAAATAATAATAAATGCAATACTCTTAAGCATTA 115 12511283 0.851973 25 102 1017 0.886904762 1.696065014 0.291666667 0.339130435 0.547619048 115 17 2 149 3R:12511262-12511417 6 115 1723 FBgn0013279 309.6566667 15.58666667 23.73666667 0.371379054 7.378100941 4.844825165 0 0 0 0.25 dme-miR-33-5p 8mer-A1 CAATGCAA 3R 12629492 12629499 + 3R_12629492_12629499_+ 0.609413552 0.609149543 0.609281547 0.000186747 Snx3 FBtr0082642|FBtr0082641 12629451|12629451 12630495|12630061 3R + 12629305 12629529 stop_codon Snx3 FlyBase G42297.1 CATCGAGGAGCGGCGCAAGGGACTGGAGGCCTTCATCAACAAGATAGCCGGACATCCGCTGGCGCAGAACGAGCGCTGCCTGCATATGTTCCTGCAGGAGAATGTCATAGATAAGAACTACGTGCCCGGCAAGATTCGGAACACATAAGCAGCTTAGTCCGGCGCAATCGAAACCCCCTAACCATAGCAATGCAATGAAGCAAAAACTCGAACGAACAAACCTGC 50 12629489 0.919818627 17 48 163 0.980769231 1.40654018 0.326923077 0.04 0.076923077 50 0 1 51 3R:12629305-12629529 8 Snx3 FBtr0082642|FBtr0082641 12629451|12629451 12630495|12630061 CAATGCAA 8mer-A1 dme-miR-33-5p 3R + 12629376 12629667 stop_codon Snx3 FlyBase G31927.1 AGCGCTGCCTGCATATGTTCCTGCAGGAGAATGTCATAGATAAGAACTACGTGCCCGGCAAGATTCGGAACACATAAGCAGCTTAGTCCGGCGCAATCGAAACCCCCTAACCATAGCAATGCAATGAAGCAAAAACTCGAACGAACAAACCTGCTACGAAATCTTTATGGGAAGCCGTGTGAATGTGTGTGCTTGCCCGGATTGGAGGAGGATGGAGCAGATGAGCGATGATGTAGGTTGGTGGAGAAGGGATCTGTTATGCGACGCGATACGAGGCGGGAAGTGCTGCTGC 49 12629500 0.949701721 27 46 196 0.974025974 1.875061263 0.324675325 0.448979592 0.649350649 49 2 0 75 3R:12629376-12629667 8 11 1724 FBgn0038065 1577.186667 135.3066667 207.25 0.006974444 0.081296807 0.053075995 3 -8 -2.5 0.25 dme-miR-980-3p 6mer2-7 GCAGCT 3R 12704567 12704572 + 3R_12704567_12704572_+ 0.976797991 0.988572142 0.982685067 0.008325546 Past1 FBtr0082655 12704080 12704875 3R + 12704398 12704631 3'utr Past1 FlyBase G42337.1 AAAGCAGGATGTAGAGTAGCAGCCTAGTGGAATAAGACAAGGAGTGTGTGTTAAGCGCCTAATTGTCATTGTTGACTTAAGGAAAGTGAAGTGTGGATAAACAATTGTTCAATGCCAATGAAAAAAGCATGAGTTAAACTGTATACAATATCTAGGTTAATGTCGATGTGCAGCTTGAAGGGCCATTAATTTGCAATCGTACCACTTTTGATACACAATAAATGTATTTTTGTT 473 12704564 0.976979186 34 459 3347 0.971751412 2.411619706 0.199623352 0.109936575 0.207156309 473 14 1 516 3R:12704398-12704631 6 Past1 FBtr0082655 12704080 12704875 GCAGCT 6mer2-7 dme-miR-980-3p 3R + 12704388 12704616 3'utr Past1 FlyBase G31961.1 AATCGATTGTAAAGCAGGATGTAGAGTAGCAGCCTAGTGGAATAAGACAAGGAGTGTGTGTTAAGCGCCTAATTGTCATTGTTGACTTAAGGAAAGTGAAGTGTGGATAAACAATTGTTCAATGCCAATGAAAAAAGCATGAGTTAAACTGTATACAATATCTAGGTTAATGTCGATGTGCAGCTTGAAGGGCCATTAATTTGCAATCGTACCACTTTTGATACACAAT 317 12704564 0.978762787 25 307 2085 0.965092402 1.973127854 0.170431211 0.372239748 0.59137577 317 13 4 470 3R:12704388-12704616 6 319 1725 FBgn0016693 1355.16 61.20333333 93.61666667 0.235396558 5.212134415 3.407512907 3 3 3 0.25 dme-miR-34-5p 6mer2-7 ACTGCC 3R 12704760 12704765 + 3R_12704760_12704765_+ 0.99406605 0.99936039 0.99671322 0.003743635 Past1 FBtr0082655 12704080 12704875 3R + 12704742 12704809 3'utr Past1 FlyBase G42339.1 AAGAGAAACGTGCAATTTACTGCCTGTGCTTCGACTATTTTGTAATTAGTGAATTCTTGAATATTAAA 14 12704777 0.901953916 10 14 127 1 1.380211242 0.083333333 0.357142857 0.625 14 0 0 24 3R:12704742-12704809 6 Past1 FBtr0082655 12704080 12704875 ACTGCC 6mer2-7 dme-miR-34-5p 3R + 12704747 12704777 3'utr Past1 FlyBase G31962.1 AAACGTGCAATTTACTGCCTGTGCTTCGACT 8 12704759 0.611920348 6 8 59 1 1.041392685 0.181818182 0.375 0.545454545 8 0 0 11 3R:12704747-12704777 6 9 1726 FBgn0016693 1355.16 61.20333333 93.61666667 0.006641282 0.147050814 0.096136728 -17 1 -8 0.25 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 12705588 12705595 - 3R_12705588_12705595_- 0.631104249 0.631025931 0.63106509 5.54E-05 mus308 FBtr0082662 12705521 12705670 3R - 12705527 12705658 3'utr mus308 FlyBase G50655.1 TTTTATAGATTTGTAATCAATTTGTTTAAAGACTGAATGTTTTAGGACTGCTTGGCCTGCCACTCCGTCCATGATCCGGCATAAGCCTTGGCGCTGCAATTGATTAATAAATAATTGTACATATCTTTTAAA 210 12705595 0.982086269 23 192 1423 0.905882353 1.886490725 0.101960784 0.19047619 0.333333333 210 22 2 231 3R:12705527-12705658 8 mus308 FBtr0082662 12705521 12705670 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R - 12705560 12705653 3'utr mus308 FlyBase G38284.1 TAGATTTGTAATCAATTTGTTTAAAGACTGAATGTTTTAGGACTGCTTGGCCTGCCACTCCGTCCATGATCCGGCATAAGCCTTGGCGCTGCAA 136 12705595 0.732745538 20 126 897 0.923423423 2.010723865 0.207207207 0.463235294 0.671171171 136 16 1 205 3R:12705560-12705653 8 104 1727 FBgn0002905 561.1366667 10.60333333 16.29666667 0.185338094 9.808236404 6.381673144 0 0 0 0.25 dme-miR-305-3p 7mer-A1 TGTGCCA 3R 12950172 12950178 - 3R_12950172_12950178_- 0.777630126 0.569888257 0.673759191 0.146895636 grsm FBtr0082730|FBtr0344095 12950040|12950040 12950195|12950195 3R - 12950139 12950213 stop_codon grsm FlyBase G50683.1 CGCTGGTGCCGCGATTAACTCAGCCTGCCTTTTACTGTGCCACGTGCCTGACTGGATTAACATTTCCATCATTTT 16 12950183 0.982459633 11 14 107 0.842105263 0.726998728 0.315789474 0.1875 0.315789474 16 1 2 16 3R:12950139-12950213 7 grsm FBtr0082730|FBtr0344095 12950040|12950040 12950195|12950195 TGTGCCA 7mer-A1 dme-miR-305-3p 3R - 12950154 12950209 stop_codon grsm FlyBase G38306.1 GGTGCCGCGATTAACTCAGCCTGCCTTTTACTGTGCCACGTGCCTGACTGGATTAA 10 12950195 0.988853232 5 8 64 0.764705882 0.812913357 0.411764706 0.5 0.705882353 10 3 1 13 3R:12950154-12950209 7 4 1728 FBgn0040493 1111.996667 68.50333333 104.3933333 0.003597133 0.058391319 0.038316623 5 17 11 0.25 dme-miR-304-5p 7mer-m8 TGAGATT 3R 12984373 12984379 + 3R_12984373_12984379_+ 0.468937556 0.490216657 0.479577106 0.015046596 Paip2 FBtr0082693 12984239 12985488 3R + 12984113 12984480 stop_codon Paip2 FlyBase G42354.1 CGGACGAGCAGAACACGGCACTTTCCGCACTACCCAAGAGCCAGTGTGATGTTGAAAAGTCTGTTCTGAATCCGATGGCTGATGAGTTTGTTCCGCGTTGTCATGTTATAGATTTCCCTGCCTCATAAAGCCAGCCCATATCTCCTGCCCGCCACAGAATCACAAACTACCCCGAACCCGTACCACGTGGACCTCATACGCGAAAAACCTTAGATAAACTGAAGACCCATTGCTAAGACTAGACTAACAGATTCCGCTAATGAGATTGATATTGATATTCTGACCAAGTTGAGCCAGATGGAGCATTGGGAGCAGTGGCTCATGAATATCTTATTTCTAGATACCAAAATGCTGGAAAAGAAAACTAA 582 12984373 0.96967329 55 560 3164 0.964285714 1.829303773 0.205714286 0.161512027 0.302857143 582 16 9 675 3R:12984113-12984480 7 Paip2 FBtr0082693 12984239 12985488 TGAGATT 7mer-m8 dme-miR-304-5p 3R + 12984213 12984483 stop_codon Paip2 FlyBase G31972.1 TCATGTTATAGATTTCCCTGCCTCATAAAGCCAGCCCATATCTCCTGCCCGCCACAGAATCACAAACTACCCCGAACCCGTACCACGTGGACCTCATACGCGAAAAACCTTAGATAAACTGAAGACCCATTGCTAAGACTAGACTAACAGATTCCGCTAATGAGATTGATATTGATATTCTGACCAAGTTGAGCCAGATGGAGCATTGGGAGCAGTGGCTCATGAATATCTTATTTCTAGATACCAAAATGCTGGAAAAGAAAACTAAATA 347 12984373 0.948630023 33 333 1728 0.954022989 2.220108088 0.168582375 0.342939481 0.563218391 347 22 2 498 3R:12984213-12984483 7 158.5 1729 FBgn0038100 1800.366667 110.8333333 168.6533333 0.088037622 1.430075188 0.939797612 0 0 0 0.25 dme-miR-999-3p 6mer2-7 GTTAAC 3R 12985120 12985125 + 3R_12985120_12985125_+ 0.999103813 0.996549827 0.99782682 0.001805951 Paip2 FBtr0082693 12984239 12985488 3R + 12985061 12985184 3'utr Paip2 FlyBase G42357.1 TAATCTTTCACCATTGTTAACTCGTTGTACGTTCTATGCCCAAGTAACAAGAAGCGCTTGTTAACCTTCCCTACTGACTCGCAATATTTGTAATTTACCAATATAATCTAGTGAACTAAACGAA 62 12985127 0.754702992 16 60 435 0.974025974 1.875061263 0.155844156 0.177419355 0.337662338 62 2 0 75 3R:12985061-12985184 6 Paip2 FBtr0082693 12984239 12985488 GTTAAC 6mer2-7 dme-miR-999-3p 3R + 12985065 12985151 3'utr Paip2 FlyBase G31974.1 CTTTCACCATTGTTAACTCGTTGTACGTTCTATGCCCAAGTAACAAGAAGCGCTTGTTAACCTTCCCTACTGACTCGCAATATTTGT 39 12985128 0.979524652 12 39 271 1 1.77815125 0.033333333 0.435897436 0.633333333 39 0 0 60 3R:12985065-12985151 6 37 1730 FBgn0038100 1800.366667 110.8333333 168.6533333 0.020551369 0.333834586 0.219384932 -7 -8 -7.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 12985241 12985246 + 3R_12985241_12985246_+ 0.874345894 0.585050945 0.729698419 0.204562456 Paip2 FBtr0082693 12984239 12985488 3R + 12985192 12985305 3'utr Paip2 FlyBase G42358.1 ACTAATGTTTAACGCCTCTTTATACAAACATCATGCATAAATATGTATATCTAGTGTTAATGGAGGAGACAACAGACAACAACAACGCTGCAATAACAAGTAGTTTGTAATTTT 47 12985251 0.951726401 13 44 247 0.944444444 1.707570176 0.111111111 0.14893617 0.259259259 47 3 0 51 3R:12985192-12985305 6 Paip2 FBtr0082693 12984239 12985488 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 12985192 12985305 3'utr Paip2 FlyBase G31975.1 ACTAATGTTTAACGCCTCTTTATACAAACATCATGCATAAATATGTATATCTAGTGTTAATGGAGGAGACAACAGACAACAACAACGCTGCAATAACAAGTAGTTTGTAATTTT 55 12985252 0.961866216 11 43 292 0.811764706 1.537819095 0.070588235 0.381818182 0.6 55 15 1 69 3R:12985192-12985305 6 15.5 1731 FBgn0038100 1800.366667 110.8333333 168.6533333 0.008609357 0.139849624 0.091904498 -10 -11 -10.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 12985473 12985479 + 3R_12985473_12985479_+ 0.714055582 0.711010228 0.712532905 0.002153423 Paip2 FBtr0082693|FBtr0082693|FBtr0082693 12984239|12984239|12984239 12985488|12985488|12985488 3R + 12985356 12985494 3'utr Paip2 FlyBase G42359.1 AATATCGTTAAAATTCGTTTCGGCATGTAGACAAAGATGAATTTCTATTTTTTCAATCAACTTAGATTTAGTGACTTAAGACAGCATTATAAGATCTACTACATTACTTACGTTACGTGTGATATAAAGATACAAAAAA 266 12985468 0.985411281 29 227 1871 0.847560976 1.745074792 0.176829268 0.203007519 0.353658537 266 46 4 278 3R:12985356-12985494 7 Paip2 FBtr0082693|FBtr0082693|FBtr0082693 12984239|12984239|12984239 12985488|12985488|12985488 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 12985409 12985493 3'utr Paip2 FlyBase G31976.2 CAATCAACTTAGATTTAGTGACTTAAGACAGCATTATAAGATCTACTACATTACTTACGTTACGTGTGATATAAAGATACAAAAA 179 12985468 0.692630658 20 160 1228 0.891525424 1.942834494 0.183050847 0.430167598 0.654237288 179 30 2 263 3R:12985409-12985493 7 167.5 1732 FBgn0038100 1800.366667 110.8333333 168.6533333 0.093036604 1.511278195 0.993161515 5 5 5 0.25 dme-miR-999-3p 7mer-A1 GTTAACA 3R 12991234 12991240 + 3R_12991234_12991240_+ 0.791447428 0.794306987 0.792877207 0.002022043 CG31342 FBtr0113404|FBtr0113403 12990027|12990767 12991543|12991543 3R + 12991173 12991247 3'utr CG31342 FlyBase G42385.1 GAATTTGTTTAGATGCGGAAAAGTTATGAGAAATTTACAACATGAAATTCAAGTATTTTAGGTTAACATATACAC 232 12991230 0.977655096 13 231 2038 0.996183206 2.416640507 0.049618321 0.099137931 0.202290076 232 1 0 261 3R:12991173-12991247 7 CG31342 FBtr0113403|FBtr0113404 12990767|12990027 12991543|12991543 GTTAACA 7mer-A1 dme-miR-999-3p 3R + 12991168 12991251 3'utr CG31342 FlyBase G32003.1 ACCTCGAATTTGTTTAGATGCGGAAAAGTTATGAGAAATTTACAACATGAAATTCAAGTATTTTAGGTTAACATATACACGCGT 187 12991230 0.904181126 12 181 1610 0.971631206 1.738780558 0.042553191 0.368983957 0.581560284 187 4 4 274 3R:12991168-12991251 7 184.5 1733 FBgn0051342 1698.813333 51.87 79.48333333 0.108605222 3.556969346 2.32124135 4 4 4 0.25 dme-miR-79-3p 6mer2-7 AGCTTT 3R 12996927 12996932 - 3R_12996927_12996932_- 0.866536183 0.697702818 0.7821195 0.119383242 CG44194 FBtr0336814|FBtr0344448 12996874|12996874 12997324|12997324 3R - 12996879 12997108 3'utr CG44194 FlyBase G50704.1 GCGCGTGGACAACTTCGAGCAGCTAAACTCCCTGGAGCGACAGGCCCAAGAGTCGAACGTGGTGGCCGCCTTGGTGAGGGATGCCGGGCGCACTCAGCTGGAATCTGGGACAGCAACGGTCCTCGGACTGGGTCCAGCCCCTGCCGAAGATCTAGACAAATTGGTGGCGCATTTGAAGCTTTTGTGAACTCTTAGGTTTATGCAACGTTACAAATAAAGTACAAGTAATC 448 12996917 0.991141742 31 429 4519 0.964552239 1.868392503 0.235074627 0.171875 0.307835821 448 13 6 517 3R:12996879-12997108 6 CG44194 FBtr0344448|FBtr0336814 12996874|12996874 12997324|12997324 AGCTTT 6mer2-7 dme-miR-79-3p 3R - 12996876 12996994 3'utr CG44194 FlyBase G38319.1 AACGGTCCTCGGACTGGGTCCAGCCCCTGCCGAAGATCTAGACAAATTGGTGGCGCATTTGAAGCTTTTGTGAACTCTTAGGTTTATGCAACGTTACAAATAAAGTACAAGTAATCAAC 280 12996917 0.834872537 21 271 2728 0.96882494 2.606381365 0.24940048 0.360714286 0.570743405 280 13 0 404 3R:12996876-12996994 6 328 1734 FBgn0265083 203.1666667 36.95 56.61333333 1.614438064 8.876860622 5.793688177 -15 -15 -15 0.25 dme-miR-13b-2-5p 7mer-m8 TTTGACG 3R 13022186 13022192 + 3R_13022186_13022192_+ 0.464354408 0.656044848 0.560199628 0.135545582 CtBP FBtr0334513|FBtr0082700|FBtr0082702|FBtr0082699 13021676|13021676|13021676|13021676 13024097|13024097|13024097|13024097 3R + 13022175 13022286 3'utr CtBP FlyBase G42475.1 AGATCAGAATGTTTGACGTCGATGAGGAGGATTAGAACGCAGCCGATGTTGGCCAAAAGTTACGTTTATCCAATATGTATCTGTGTACGTATATGCATTGTTTCGGCCCTTC 26 13022188 0.802836975 10 23 171 0.892857143 1.096910013 0.178571429 0.038461538 0.107142857 26 2 1 25 3R:13022175-13022286 7 CtBP FBtr0082702|FBtr0082699|FBtr0334513|FBtr0082700 13021676|13021676|13021676|13021676 13024097|13024097|13024097|13024097 TTTGACG 7mer-m8 dme-miR-13b-2-5p 3R + 13022176 13022213 3'utr CtBP FlyBase G32072.1 GATCAGAATGTTTGACGTCGATGAGGAGGATTAGAACG 6 13022187 0.953397184 4 6 30 1 0.954242509 0.444444444 0.5 0.666666667 6 0 0 9 3R:13022176-13022213 7 6.5 1735 FBgn0020496 3905.446667 142.2566667 217.6 0.001664342 0.045692059 0.029871324 -2 -1 -1.5 0.25 dme-bantam-3p 8mer-A1 TGATCTCA 3R 13022979 13022986 + 3R_13022979_13022986_+ 0.631104119 0.631130283 0.631117201 1.85E-05 CtBP FBtr0334513|FBtr0082700|FBtr0082702|FBtr0082699 13021676|13021676|13021676|13021676 13024097|13024097|13024097|13024097 3R + 13022943 13023009 3'utr CtBP FlyBase G42481.1 TATTCTGTTGCTCAAGCTCTGCTCTAATTTACAATATGATCTCATCATTCAAGTTTATTTTCGCCTT 84 13022978 0.759827641 12 81 734 0.973684211 2.045322979 0 0.261904762 0.456140351 84 3 0 111 3R:13022943-13023009 8 CtBP FBtr0082702|FBtr0082699|FBtr0334513|FBtr0082700 13021676|13021676|13021676|13021676 13024097|13024097|13024097|13024097 TGATCTCA 8mer-A1 dme-bantam-3p 3R + 13022944 13023006 3'utr CtBP FlyBase G32078.1 ATTCTGTTGCTCAAGCTCTGCTCTAATTTACAATATGATCTCATCATTCAAGTTTATTTTCGC 63 13022978 0.735181047 11 61 538 0.979381443 1.977723605 0 0.380952381 0.597938144 63 2 0 95 3R:13022944-13023006 8 68 1736 FBgn0020496 3905.446667 142.2566667 217.6 0.017411581 0.478009232 0.3125 1 1 1 0.25 dme-miR-2b-2-5p 6mer2-7 TGAAGA 3R 13025506 13025511 + 3R_13025506_13025511_+ 0.865756435 0.99972624 0.932741337 0.094730954 CtBP FBtr0334515|FBtr0334516|FBtr0100161|FBtr0334517|FBtr0334514 13025471|13025410|13025471|13025471|13025471 13026275|13026275|13026275|13026275|13026275 3R + 13025471 13025562 stop_codon CtBP FlyBase G42494.1 AGGCATCTGCTGTCCAACTGGCTGCACCTGAGAGCTGAAGAGCTGGAGTTGACGATGACAACGGGCAGTGGCGCAATGGAGTCCAGCACACA 33 13025498 0.871761709 11 33 126 1 1.556302501 0.5 0.090909091 0.166666667 33 0 0 36 3R:13025471-13025562 6 CtBP FBtr0334517|FBtr0334514|FBtr0334515|FBtr0334516|FBtr0100161 13025471|13025471|13025471|13025410|13025471 13026275|13026275|13026275|13026275|13026275 TGAAGA 6mer2-7 dme-miR-2b-2-5p 3R + 13025472 13025522 3'utr CtBP FlyBase G32087.1 GGCATCTGCTGTCCAACTGGCTGCACCTGAGAGCTGAAGAGCTGGAGTTGA 15 13025505 0.850097209 4 15 62 1 1.322219295 0.523809524 0.4 0.571428571 15 0 0 21 3R:13025472-13025522 6 17.5 1737 FBgn0020496 3905.446667 142.2566667 217.6 0.004480922 0.123017082 0.080422794 8 1 4.5 0.25 dme-miR-184-5p 6mer3-8 TGATAA 3R 13262162 13262167 + 3R_13262162_13262167_+ 0.99995893 0.855626384 0.927792657 0.102058489 CG11686 FBtr0082735|FBtr0335222 13262120|13262120 13262227|13262227 3R + 13262143 13262190 3'utr CG11686 FlyBase G42527.1 AATTAACTAAGTGCCTTACTGATAACTCTTGTTTTCAATCATTTTTTA 17 13262159 0.658410539 7 17 153 1 1.322219295 0.047619048 0.176470588 0.333333333 17 0 0 21 3R:13262143-13262190 6 CG11686 FBtr0335222|FBtr0082735 13262120|13262120 13262227|13262227 TGATAA 6mer3-8 dme-miR-184-5p 3R + 13262143 13262182 3'utr CG11686 FlyBase G32118.1 AATTAACTAAGTGCCTTACTGATAACTCTTGTTTTCAATC 20 13262159 0.718139279 5 18 169 0.928571429 1.414973348 0.321428571 0.35 0.535714286 20 2 0 26 3R:13262143-13262182 6 18.5 1738 FBgn0040551 12.66666667 4.276666667 6.6 1.460526316 4.325798909 2.803030303 3 3 3 0.25 dme-miR-184-3p 7mer-A1 CCGTCCA 3R 13269681 13269687 + 3R_13269681_13269687_+ 0.687314393 0.769428541 0.728371467 0.058063437 Su(var)3-7 FBtr0082736 13268891 13270038 3R + 13269653 13269708 3'utr Su(var)3-7 FlyBase G42548.1 GTCCAGAAAGCTGCATAGCTCTTCAATCCCGTCCAGTGTCCGACCGAGTTCTTCGC 168 13269679 0.853542176 4 159 1157 0.950819672 1.638489257 0.371584699 0.089285714 0.163934426 168 6 3 174 3R:13269653-13269708 7 Su(var)3-7 FBtr0082736 13268891 13270038 CCGTCCA 7mer-A1 dme-miR-184-3p 3R + 13269652 13269710 3'utr Su(var)3-7 FlyBase G32132.1 CGTCCAGAAAGCTGCATAGCTCTTCAATCCCGTCCAGTGTCCGACCGAGTTCTTCGCTA 67 13269679 0.80390213 5 60 464 0.918604651 1.596597096 0.313953488 0.268656716 0.430232558 67 6 1 79 3R:13269652-13269710 7 115 1739 FBgn0003598 516.8066667 14.16 21.58 0.222520349 8.121468927 5.329008341 2 2 2 0.25 dme-miR-970-3p 7mer-A1 CTTATGA 3R 13312756 13312762 + 3R_13312756_13312762_+ 0.790581584 0.76664664 0.778614112 0.016924601 CG32473 FBtr0082742|FBtr0082743|FBtr0082744 13312627|13312627|13312627 13312785|13312785|13312785 3R + 13312738 13312767 3'utr CG32473 FlyBase G42559.1 AACGAAGAATTGTGATTGCTTATGATATTT 6 13312754 0.783158235 3 6 45 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3R:13312738-13312767 7 CG32473 FBtr0082744|FBtr0082743|FBtr0082742 13312627|13312627|13312627 13312785|13312785|13312785 CTTATGA 7mer-A1 dme-miR-970-3p 3R + 13312738 13312759 3'utr CG32473 FlyBase G32140.1 AACGAAGAATTGTGATTGCTTA 7 13312754 0.789544453 2 7 42 1 1.176091259 0 0.714285714 0.866666667 7 0 0 15 3R:13312738-13312759 4 6.5 1740 FBgn0052473 306.7266667 12.40666667 19.06 0.021191506 0.523911875 0.341028332 2 2 2 0.25 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 13368808 13368815 + 3R_13368808_13368815_+ 0.43029671 0.437342931 0.433819821 0.004982416 Dic1 FBtr0346113 13368692 13369278 3R + 13368687 13368893 stop_codon Dic1 FlyBase G42565.1 GAATTAGCCGCGATGCCAATCGATACCTTAACTAGGCAATAATTCTCCTTGGCTGGCTGGCAGATTCCCTTGAGCAATGCAACATTCCAGCAGCAATTCGTTCACCGTGTAGAACATAACTTAGCTTTAGCCCGTTCCAGTTGTTAACCAAGATGCTTTTATGCTAGCAAAATATTTGTTGTTAAGCGTTCAATGCCCGCTATCCCG 214 13368807 0.938636262 25 212 1540 0.992125984 1.924279286 0.255905512 0.135514019 0.271653543 214 0 2 252 3R:13368687-13368893 8 Dic1 FBtr0082748|FBtr0082747|FBtr0346113 13368692|13368692|13368692 13369091|13369091|13369278 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R + 13368780 13368832 3'utr Dic1 FlyBase G32146.1 CAATTCGTTCACCGTGTAGAACATAACTTAGCTTTAGCCCGTTCCAGTTGTTA 112 13368807 0.797299998 6 108 746 0.98816568 2.222716471 0.26035503 0.392857143 0.597633136 112 2 0 167 3R:13368780-13368832 8 127 1741 FBgn0027610 272.8866667 21.36 32.8 0.465394669 5.945692884 3.87195122 1 1 1 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 13429312 13429319 - 3R_13429312_13429319_- 0.334934798 0.404523095 0.369728946 0.049206359 yrt FBtr0114375|FBtr0114374|FBtr0114376|FBtr0082793 13428865|13428865|13428865|13428865 13429604|13429604|13430186|13429604 3R - 13429309 13429369 3'utr yrt FlyBase G50773.2 TATATCATATACACCGATGCGATATCGAGGAACGAAATGTGCTAAACCGTGTACTTAATAA 44 13429320 0.827045185 6 39 221 0.892857143 1.096910013 0.553571429 0.227272727 0.392857143 44 3 3 50 3R:13429309-13429369 8 yrt FBtr0114376|FBtr0082793|FBtr0114375|FBtr0114374 13428865|13428865|13428865|13428865 13430186|13429604|13429604|13429604 GTACTTAA 8mer-A1 dme-miR-252-5p 3R - 13429309 13429359 3'utr yrt FlyBase G38379.1 ACACCGATGCGATATCGAGGAACGAAATGTGCTAAACCGTGTACTTAATAA 28 13429320 0.803492703 5 26 135 0.977272727 1.633468456 0.727272727 0.464285714 0.659090909 28 1 0 43 3R:13429309-13429359 8 24.5 1742 FBgn0004049 300.3333333 8.753333333 13.46333333 0.081576027 2.79893374 1.819757366 1 1 1 0.25 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 13429721 13429728 - 3R_13429721_13429728_- 0.626629938 0.626239002 0.62643447 0.000276408 yrt FBtr0114376 13428865 13430186 3R - 13429603 13429761 stop_codon yrt FlyBase G50776.1 GAGCAATTATCCGGACAGCAGTCGCATTCCGTTTCCGTCCAGCAGCAACAGCAAAGACATGGTATCGCCCTGGCTGGTTTCCTCGGAGGTGGTATCGGCACCCAAGGGACGCGAGTCGGCCATCATTCGAAAATCCGTTATTACAACCCAGTTGTAATT 421 13429729 0.970743294 14 415 2392 0.985263158 1.971275849 0.170526316 0.116389549 0.216842105 421 3 4 468 3R:13429603-13429761 8 yrt FBtr0114376 13428865 13430186 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R - 13429659 13429767 3'utr yrt FlyBase G38382.1 AACTCCGAGCAATTATCCGGACAGCAGTCGCATTCCGTTTCCGTCCAGCAGCAACAGCAAAGACATGGTATCGCCCTGGCTGGTTTCCTCGGAGGTGGTATCGGCACCC 252 13429729 0.987630833 10 251 1384 0.997409326 2.284430734 0.170984456 0.396825397 0.606217617 252 0 1 385 3R:13429659-13429767 8 326 1743 FBgn0004049 300.3333333 8.753333333 13.46333333 1.085460599 37.24295506 24.21391434 1 1 1 0.25 dme-miR-965-3p 6mer3-8 TACGCT 3R 13635299 13635304 - 3R_13635299_13635304_- 0.855596809 0.51224732 0.683922065 0.24278476 sqd FBtr0309094|FBtr0082856 13634860|13635190 13636454|13636454 3R - 13635262 13635320 3'utr sqd FlyBase G50790.1 TTCCGGATATGTGTATTACGCTCATAGACTACATATATACATACATAATACATAATACA 40 13635305 0.669475145 5 38 313 0.954545455 1.62324929 0.136363636 0.1 0.181818182 40 2 0 42 3R:13635262-13635320 6 sqd FBtr0309094|FBtr0082856 13634860|13635190 13636454|13636454 TACGCT 6mer3-8 dme-miR-965-3p 3R - 13635257 13635317 3'utr sqd FlyBase G38391.1 CGGATATGTGTATTACGCTCATAGACTACATATATACATACATAATACATAATACATCTAT 14 13635296 0.980421074 5 13 98 0.952380952 1.301029996 0.142857143 0.357142857 0.571428571 14 1 0 20 3R:13635257-13635317 6 25 1744 FBgn0263396 13095.56667 400.09 616.6433333 0.001909043 0.062485941 0.040542075 1 -8 -3.5 0.25 dme-miR-1012-3p 6mer3-8 TTGACT 3R 13639898 13639903 - 3R_13639898_13639903_- 0.681332989 0.630239294 0.655786142 0.036128702 sqd FBtr0082854 13637716 13642188 3R - 13639792 13639926 3'utr sqd FlyBase G50804.1 TGTTGTCAATGTGCGTCGACAATTTGACTGTATACCAATTATATATACATTTGTACATTTACATACACCTTTAATCATAAACTTTGAGTAAATTGTTTTACAAAGAAATTGCATGTTTCTCAATGTTTTTAGCAA 22 13639896 0.984377038 13 22 174 1 1.462397998 0.275862069 0.227272727 0.413793103 22 0 0 29 3R:13639792-13639926 6 sqd FBtr0082854 13637716 13642188 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 13639881 13639923 3'utr sqd FlyBase G38403.1 TGTCAATGTGCGTCGACAATTTGACTGTATACCAATTATATAT 20 13639902 0.962089656 5 17 137 0.928571429 1.414973348 0.428571429 0.4 0.571428571 20 2 0 26 3R:13639881-13639923 6 15.5 1745 FBgn0263396 13095.56667 400.09 616.6433333 0.001183607 0.038741283 0.025136086 -7 -1 -4 0.25 dme-miR-277-3p 7mer-m8 TGCATTT 3R 13640404 13640410 - 3R_13640404_13640410_- 0.619453415 0.620204148 0.619828782 0.000530825 sqd FBtr0082854 13637716 13642188 3R - 13640378 13640472 3'utr sqd FlyBase G50806.1 ACCACTGCTGCAGCACCCCCCCGCAGCCTCATTCGTTAGATCGTTCTTTTATTTGCTTTATTTGCATTTCCGCTGCACTTTCTTGACCAAAACGT 26 13640411 0.930024362 10 25 268 0.939393939 1.491361694 0.303030303 0.230769231 0.393939394 26 2 0 31 3R:13640378-13640472 7 sqd FBtr0082854 13637716 13642188 TGCATTT 7mer-m8 dme-miR-277-3p 3R - 13640393 13640430 3'utr sqd FlyBase G38407.1 GTTCTTTTATTTGCTTTATTTGCATTTCCGCTGCACTT 7 13640412 0.646496213 5 7 88 1 1 0.6 0.428571429 0.6 7 0 0 10 3R:13640393-13640430 7 12.5 1746 FBgn0263396 13095.56667 400.09 616.6433333 0.000954522 0.03124297 0.020271037 1 2 1.5 0.25 dme-miR-33-5p 7mer-m8 CAATGCA 3R 13640735 13640741 - 3R_13640735_13640741_- 0.672454579 0.670752014 0.671603297 0.00120392 sqd FBtr0082854 13637716 13642188 3R - 13640728 13640779 3'utr sqd FlyBase G50809.1 TTATTATTCCGGCAACGGGATAATATTCACGTTCTTTGCAATGCATATGTTT 7 13640734 0.892321635 5 6 64 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 3R:13640728-13640779 7 sqd FBtr0082854 13637716 13642188 CAATGCA 7mer-m8 dme-miR-33-5p 3R - 13640720 13640752 3'utr sqd FlyBase G38410.1 CACGTTCTTTGCAATGCATATGTTTTCGTATGC 8 13640745 0.686614291 6 7 63 0.833333333 1 0 0.5 0.666666667 8 2 0 10 3R:13640720-13640752 7 6 1747 FBgn0263396 13095.56667 400.09 616.6433333 0.00045817 0.014996626 0.009730098 -7 4 -1.5 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 13641265 13641271 - 3R_13641265_13641271_- 0.808925598 0.807391459 0.808158529 0.001084773 sqd FBtr0082854 13637716 13642188 3R - 13641254 13641294 3'utr sqd FlyBase G50812.1 CTTGGTTGCCTTCAACAGACTTTCCAAAGATGACAAATACC 14 13641273 0.673489021 4 14 59 1 1.278753601 0.052631579 0.214285714 0.421052632 14 0 0 19 3R:13641254-13641294 7 sqd FBtr0082854 13637716 13642188 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 13641247 13641285 3'utr sqd FlyBase G38414.1 CTTCAACAGACTTTCCAAAGATGACAAATACCTCAAACG 8 13641273 0.912057784 3 8 26 1 1.204119983 0.1875 0.375 0.6875 8 0 0 16 3R:13641247-13641285 7 10.5 1748 FBgn0263396 13095.56667 400.09 616.6433333 0.000801798 0.026244095 0.017027671 2 2 2 0.25 dme-miR-263a-5p 7mer-A1 TGCCATA 3R 13642074 13642080 - 3R_13642074_13642080_- 0.448365063 0.699051768 0.573708416 0.177262266 sqd FBtr0082854 13637716 13642188 3R - 13642050 13642120 3'utr sqd FlyBase G50818.1 AAACAACAACAACCGCAGAATATAAAAACCTTCTAATTTTTGCCATAGACCTGATCTGATCCAAAATTTCC 16 13642069 0.97934253 8 15 105 1 1.278753601 0.052631579 0.266666667 0.421052632 15 0 0 19 3R:13642050-13642120 7 sqd FBtr0082854 13637716 13642188 TGCCATA 7mer-A1 dme-miR-263a-5p 3R - 13642053 13642086 3'utr sqd FlyBase G38420.1 AATTTTTGCCATAGACCTGATCTGATCCAAAATT 9 13642066 0.618280974 6 9 57 1 1.255272505 0 0.555555556 0.777777778 9 0 0 18 3R:13642053-13642086 7 10.5 1749 FBgn0263396 13095.56667 400.09 616.6433333 0.000801798 0.026244095 0.017027671 -11 -14 -12.5 0.25 dme-miR-7-5p 7mer-A1 TCTTCCA 3R 13651681 13651687 + 3R_13651681_13651687_+ 0.47884446 0.329386837 0.404115648 0.105682553 rin FBtr0346347|FBtr0082797|FBtr0082799|FBtr0346346 13651565|13651565|13651565|13651565 13654527|13652413|13652413|13652413 3R + 13651596 13651734 3'utr rin FlyBase G42600.1 AAAGCATCAACAAATGAGCAACGGCAGCAGTAGCGACTATAACATCAAGAACAGCAGCAACAACCCAACGTTAAAAACATCGACTTCTTCCACAATGCAATCAATCAATTACATTCAAGAACATCTCATGCAATTAAAC 68 13651683 0.952372698 13 64 291 0.951219512 1.591064607 0.036585366 0.191176471 0.329268293 68 3 1 78 3R:13651596-13651734 7 rin FBtr0082799|FBtr0346346|FBtr0346347|FBtr0082797 13651565|13651565|13651565|13651565 13652413|13652413|13654527|13652413 TCTTCCA 7mer-A1 dme-miR-7-5p 3R + 13651642 13651772 3'utr rin FlyBase G32182.2 AAGAACAGCAGCAACAACCCAACGTTAAAAACATCGACTTCTTCCACAATGCAATCAATCAATTACATTCAAGAACATCTCATGCAATTAAACACACGCAAATCACACACTCATACACTAAGATAAAGTAG 40 13651683 0.956057617 15 37 191 0.933333333 1.748188027 0.066666667 0.325 0.55 40 4 0 56 3R:13651642-13651772 7 24 1750 FBgn0015778 4641.9 120.1133333 185.17 0.005170297 0.199811289 0.129610628 -2 -2 -2 0.25 dme-miR-276a-3p 6mer2-7 GTTCCT 3R 13651808 13651813 + 3R_13651808_13651813_+ 0.97226196 0.848855689 0.910558825 0.087261432 rin FBtr0346347|FBtr0082797|FBtr0082799|FBtr0346346 13651565|13651565|13651565|13651565 13654527|13652413|13652413|13652413 3R + 13651785 13651825 3'utr rin FlyBase G42601.1 AAAACGTCAACTGTCCTTTAAATGTTCCTGAGCGCAACTCT 17 13651806 0.685274808 4 14 127 0.80952381 1.230448921 0.19047619 0.235294118 0.380952381 17 4 0 17 3R:13651785-13651825 6 rin FBtr0082799|FBtr0346346|FBtr0346347|FBtr0082797 13651565|13651565|13651565|13651565 13652413|13652413|13654527|13652413 GTTCCT 6mer2-7 dme-miR-276a-3p 3R + 13651785 13651825 3'utr rin FlyBase G32183.1 AAAACGTCAACTGTCCTTTAAATGTTCCTGAGCGCAACTCT 21 13651806 0.728463717 4 18 142 0.806451613 0.795880017 0.193548387 0.380952381 0.580645161 21 3 3 25 3R:13651785-13651825 6 14.5 1751 FBgn0015778 4641.9 120.1133333 185.17 0.003123721 0.120719321 0.078306421 2 2 2 0.25 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 13663539 13663545 + 3R_13663539_13663545_+ 0.572307 0.511778218 0.542042609 0.042800325 B52 FBtr0300588|FBtr0082804|FBtr0300586|FBtr0082803 13663107|13663107|13663474|13663474 13666891|13666891|13666891|13666891 3R + 13663518 13663557 5'utr B52 FlyBase G42619.1 AGAATCAAATCTAATTGAATCGCTGTGAGAAAGACAAGCT 7 13663535 0.964573348 3 6 31 0.857142857 0.77815125 0 0 0 7 1 0 6 3R:13663518-13663557 7 B52 FBtr0082803|FBtr0300586|FBtr0082804|FBtr0300588 13663474|13663474|13663107|13663107 13666891|13666891|13666891|13666891 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R + 13663513 13663584 5'utr B52 FlyBase G32199.1 GAAAGAGAATCAAATCTAATTGAATCGCTGTGAGAAAGACAAGCTAGTCTAGTGACCGACCGACCGGTTCAG 8 13663534 0.945741218 4 7 35 0.923076923 0.77815125 0.307692308 0.25 0.538461538 8 0 1 12 3R:13663513-13663584 7 5.5 1752 FBgn0004587 2711.693333 191.7166667 292.1666667 0.002028253 0.028688168 0.018824872 4 5 4.5 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3R 13675253 13675259 - 3R_13675253_13675259_- 0.51711964 0.510755279 0.513937459 0.00450024 CG9588 FBtr0082849 13675090 13675502 3R - 13675114 13675292 3'utr CG9588 FlyBase G50842.1 AAGGTGCACAGGTGACAGGCAAAAGGATGATATTGTGATTCGGTGGATTCTGTCGACATGACCGATTTTTTTTGCATTTAATTTTCATTCAATATGAAATGATGCGTAACAAAATGATGAGGCGGTTTTACTAACAAATAAGTTTTTATAGCGCTTTTACTGGTAAATAAAGAAGGATA 169 13675260 0.902794834 20 160 1327 0.940594059 1.433655561 0.361386139 0.159763314 0.297029703 169 6 6 190 3R:13675114-13675292 7 CG9588 FBtr0082849 13675090 13675502 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 13675208 13675276 3'utr CG9588 FlyBase G38439.1 AGGCAAAAGGATGATATTGTGATTCGGTGGATTCTGTCGACATGACCGATTTTTTTTGCATTTAATTTT 115 13675260 0.692813686 10 108 891 0.941176471 1.505149978 0.294117647 0.365217391 0.570588235 115 6 4 160 3R:13675208-13675276 7 111 1753 FBgn0038166 196.9933333 19.93666667 30.61666667 0.563470845 5.567630831 3.62547632 1 1 1 0.25 dme-miR-34-5p 6mer2-7 ACTGCC 3R 13692856 13692861 + 3R_13692856_13692861_+ 0.651837696 0.450285351 0.551061523 0.142518998 flfl FBtr0114604 13691732 13693905 3R + 13692778 13692882 3'utr flfl FlyBase G42667.1 GAGTTAAATGCAGATAACACTTGAACCCAATGAACCTTGTATATAATTTAGTCACTCTCAATGCGCGATTAGTTGATAACTGCCCTTGCACCACTGACGCCGACA 17 13692864 0.975233214 11 15 94 0.925925926 1.397940009 0.111111111 0.411764706 0.62962963 17 2 0 25 3R:13692778-13692882 6 flfl FBtr0114604 13691732 13693905 ACTGCC 6mer2-7 dme-miR-34-5p 3R + 13692783 13692877 3'utr flfl FlyBase G32233.1 AAATGCAGATAACACTTGAACCCAATGAACCTTGTATATAATTTAGTCACTCTCAATGCGCGATTAGTTGATAACTGCCCTTGCACCACTGACGC 16 13692856 0.974059463 9 14 95 0.916666667 1.342422681 0.041666667 0.375 0.583333333 16 2 0 22 3R:13692783-13692877 6 5.5 1754 FBgn0024555 2089.806667 50.89333333 77.96333333 0.002631822 0.108069164 0.070545983 -8 0 -4 0.25 dme-miR-283-5p 6mer3-8 TGATAT 3R 13693724 13693729 + 3R_13693724_13693729_+ 0.896500336 0.999711361 0.948105849 0.072981269 flfl FBtr0114604 13691732 13693905 3R + 13693671 13693771 3'utr flfl FlyBase G42672.1 AGCGACAACACTATAGTTTATACATAGTATTTATATGAATCGTGTATTGTATATGATATGCTGTCTAATCCCTAATCCTAACACATACCCATTACGTCTAT 15 13693729 0.987087292 8 15 133 1 1.204119983 0.0625 0.066666667 0.125 15 0 0 16 3R:13693671-13693771 6 flfl FBtr0114604 13691732 13693905 TGATAT 6mer3-8 dme-miR-283-5p 3R + 13693706 13693773 3'utr flfl FlyBase G32239.1 TGAATCGTGTATTGTATATGATATGCTGTCTAATCCCTAATCCTAACACATACCCATTACGTCTATAA 16 13693728 0.84123054 8 13 133 0.92 1.361727836 0.08 0.4375 0.64 16 2 0 23 3R:13693706-13693773 6 11 1755 FBgn0024555 2089.806667 50.89333333 77.96333333 0.005263645 0.216138329 0.141091966 -5 -4 -4.5 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3R 13838559 13838565 - 3R_13838559_13838565_- 0.442826952 0.416471297 0.429649125 0.018636294 CG31495 FBtr0082882|FBtr0344765 13838238|13838433 13838773|13838773 3R - 13838545 13838582 3'utr CG31495 FlyBase G50878.1 AATGAACAGCCCGATAATGTGATTGCAAAGATACTAGA 12 13838559 0.70531292 3 11 70 0.916666667 1.041392685 0.166666667 0 0 12 1 0 11 3R:13838545-13838582 7 CG31495 FBtr0344765|FBtr0082882 13838433|13838238 13838773|13838773 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 13838545 13838581 3'utr CG31495 FlyBase G38462.1 ATGAACAGCCCGATAATGTGATTGCAAAGATACTAGA 15 13838559 0.763889428 3 14 84 0.92 1.361727836 0 0.533333333 0.72 15 2 0 23 3R:13838545-13838581 7 13.5 1756 FBgn0051495 85.87 7.076666667 10.89333333 0.157214394 1.907677814 1.239290086 -6 -6 -6 0.25 dme-miR-11-3p 7mer-m1 TGTGATG 3R 13968379 13968385 - 3R_13968379_13968385_- 0.600222267 0.606913249 0.603567758 0.004731181 rdx FBtr0334298|FBtr0301632|FBtr0301634|FBtr0100361 13967059|13967953|13967953|13967953 13969185|13969185|13969185|13969185 3R - 13968349 13968408 3'utr rdx FlyBase G50886.1 AATTACAAAGCGTACACTTTGATTGTGATGTATATTCGATGAGTATGACTAATGAGTAAC 39 13968386 0.890507163 9 36 344 0.94 1.194976603 0.24 0.256410256 0.42 39 1 2 47 3R:13968349-13968408 7 rdx FBtr0301634|FBtr0100361|FBtr0301632|FBtr0334298 13967953|13967953|13967953|13967059 13969185|13969185|13969185|13969185 TGTGATG 7mer-m1 dme-miR-11-3p 3R - 13968349 13968408 3'utr rdx FlyBase G38468.1 AATTACAAAGCGTACACTTTGATTGTGATGTATATTCGATGAGTATGACTAATGAGTAAC 27 13968386 0.987803012 10 27 264 1 1.579783597 0.157894737 0.37037037 0.552631579 27 0 0 38 3R:13968349-13968408 7 29 1757 FBgn0264493 1241.27 56.45333333 86.81 0.023363168 0.51369863 0.334062896 1 1 1 0.25 dme-miR-33-5p 7mer-A1 AATGCAA 3R 13968850 13968856 - 3R_13968850_13968856_- 0.558996036 0.702894234 0.630945135 0.101751393 rdx FBtr0334298|FBtr0301632|FBtr0301633|FBtr0301634|FBtr0100361 13967059|13967953|13968623|13967953|13967953 13969185|13969185|13969185|13969185|13969185 3R - 13968810 13968875 3'utr rdx FlyBase G50889.1 ATGTTAAACGCAGACAGATAATGCAAATGCAGGAGCAAAAGCATAGCGAGCCGTACCGTTTATTGT 46 13968857 0.838817188 7 45 117 0.980769231 1.707570176 0.192307692 0.108695652 0.211538462 46 1 0 51 3R:13968810-13968875 7 rdx FBtr0301634|FBtr0100361|FBtr0301632|FBtr0301633|FBtr0334298 13967953|13967953|13967953|13968623|13967059 13969185|13969185|13969185|13969185|13969185 AATGCAA 7mer-A1 dme-miR-33-5p 3R - 13968812 13968870 3'utr rdx FlyBase G38470.1 AAACGCAGACAGATAATGCAAATGCAGGAGCAAAAGCATAGCGAGCCGTACCGTTTATT 16 13968857 0.849053774 4 16 38 1 1.342422681 0.227272727 0.3125 0.5 16 0 0 22 3R:13968812-13968870 7 27.5 1758 FBgn0264493 1241.27 56.45333333 86.81 0.022154729 0.487128011 0.316783781 1 1 1 0.25 dme-miR-307a-3p 7mer-m8 GGTTGTG 3R 14034560 14034566 + 3R_14034560_14034566_+ 0.697428345 0.645063033 0.671245689 0.037027859 CG3061 FBtr0082869 14034491 14035041 3R + 14034496 14034615 3'utr CG3061 FlyBase G42701.1 AGTTAATGCTATCACACGAAAAGCTACTCCTCAAATCCACCACTATTTGAAACCTTAACTGCTGGGTTGTGTAGTTATTGCATATTTTGCTTTAGTTGTTATAAATGAATTTCATTGTCT 21 14034573 0.991038884 15 18 177 0.913043478 1.021189299 0.217391304 0.095238095 0.173913043 21 1 1 21 3R:14034496-14034615 7 CG3061 FBtr0082869 14034491 14035041 GGTTGTG 7mer-m8 dme-miR-307a-3p 3R + 14034545 14034579 3'utr CG3061 FlyBase G32265.2 AAACCTTAACTGCTGGGTTGTGTAGTTATTGCATA 5 14034564 0.530392835 3 3 41 0.8 0.903089987 0.3 0.8 0.9 5 2 0 8 3R:14034545-14034579 7 5 1759 FBgn0038195 1209.576667 74.17333333 113.5466667 0.004133678 0.067409671 0.044034758 -13 -4 -8.5 0.25 dme-miR-283-5p 6mer3-8 TGATAT 3R 14119533 14119538 - 3R_14119533_14119538_- 0.857753427 0.989698484 0.923725955 0.093299275 Abi FBtr0112896|FBtr0337096|FBtr0082910|FBtr0337097|FBtr0307077|FBtr0307076 14119260|14119260|14119260|14119260|14119260|14119260 14120064|14120064|14120064|14120064|14120064|14120064 3R - 14119486 14119587 3'utr Abi FlyBase G50913.2 AAATATTTGCTCACAGTTTTATCAAGCGATTTCTGTTTGCCTTGCGCTTTGATATGCCCGGCTATTATACACCAATACTACCCGAACCTATGCCCCCAGCAA 33 14119533 0.939595014 10 30 221 0.897435897 1.06694679 0.230769231 0.181818182 0.307692308 33 2 2 35 3R:14119486-14119587 6 Abi FBtr0307077|FBtr0307076|FBtr0082910|FBtr0337097|FBtr0112896|FBtr0337096 14119260|14119260|14119260|14119260|14119260|14119260 14120064|14120064|14120064|14120064|14120064|14120064 TGATAT 6mer3-8 dme-miR-283-5p 3R - 14119458 14119556 3'utr Abi FlyBase G38487.1 TCTGTTTGCCTTGCGCTTTGATATGCCCGGCTATTATACACCAATACTACCCGAACCTATGCCCCCAGCAATACTGTAGGTTATATAAATTTCAGTTAG 11 14119533 0.988293534 7 10 89 0.933333333 1.146128036 0.2 0.363636364 0.533333333 11 1 0 14 3R:14119458-14119556 6 14 1760 FBgn0020510 1356.63 69.31 106.3 0.010319689 0.201991055 0.131702728 -5 -5 -5 0.25 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 14256901 14256907 + 3R_14256901_14256907_+ 0.571770796 0.614450874 0.593110835 0.030179388 CG43179 FBtr0306052 14256732 14256930 3R + 14256885 14256942 3'utr CG43179 FlyBase G42746.1 ATTCAGGCGTTCTTATGGCAGCTTTAAAAAAGCCATAATGACGGTTAAGGTCTCTGCA 14 14256900 0.981767122 4 14 100 1 1.204119983 0 0.142857143 0.25 14 0 0 16 3R:14256885-14256942 7 CG43179 FBtr0306052 14256732 14256930 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 14256886 14256913 3'utr CG43179 FlyBase G32298.1 TTCAGGCGTTCTTATGGCAGCTTTAAAA 6 14256900 0.726681212 3 5 43 0.833333333 0.698970004 0 0 0 6 1 0 5 3R:14256886-14256913 7 9 1761 FBgn0262808 15 2.723333333 4.116666667 0.6 3.304773562 2.186234818 1 1 1 0.25 dme-miR-980-3p 6mer3-8 GGCAGC 3R 14263455 14263460 - 3R_14263455_14263460_- 0.98019896 0.995635486 0.987917223 0.010915254 trx FBtr0082950|FBtr0082948|FBtr0082947|FBtr0082949 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 3R - 14263435 14263514 3'utr trx FlyBase G50948.2 TCCTATCGGGGCGATCGGTCAGACTTGTACAGGCAAAGTTCCATAGCATTTTTTGGCAGCCATTCAAGACGCGCGCACTT 62 14263461 0.781601175 9 51 404 0.826086957 1.278753601 0.086956522 0.096774194 0.188405797 62 10 2 57 3R:14263435-14263514 6 trx FBtr0082947|FBtr0082949|FBtr0082950|FBtr0082948 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 14263436 14263520 3'utr trx FlyBase G38508.1 GTATATTCCTATCGGGGCGATCGGTCAGACTTGTACAGGCAAAGTTCCATAGCATTTTTTGGCAGCCATTCAAGACGCGCGCACT 30 14263461 0.983629459 9 24 197 0.76744186 1.041392685 0.093023256 0.366666667 0.558139535 30 8 2 33 3R:14263436-14263520 6 36 1762 FBgn0003862 1984.743333 17.36 26.62333333 0.018138365 2.073732719 1.352197321 1 1 1 0.25 dme-miR-932-5p 6mer2-7 GAATTG 3R 14302262 14302267 + 3R_14302262_14302267_+ 0.852816985 0.554590712 0.703703848 0.210877839 CG12207 FBtr0309999|FBtr0309998|FBtr0082922|FBtr0344157|FBtr0082923|FBtr0309997|FBtr0082921 14301482|14301482|14301482|14301482|14301482|14301482|14301482 14302276|14302276|14302276|14302276|14302276|14302276|14302276 3R + 14302196 14302277 3'utr CG12207 FlyBase G42758.1 TATCGAACTGCACTCATATCGAGCCAAGTCATGTTGTACGTGAGAATGTTTTTTAAAATAAAGTGAGAATTGTGTTGGAACA 17 14302266 0.980212426 11 15 107 0.88 1.342422681 0.32 0.294117647 0.52 17 3 0 22 3R:14302196-14302277 6 CG12207 FBtr0344157|FBtr0082922|FBtr0309998|FBtr0309999|FBtr0082921|FBtr0309997|FBtr0082923 14301482|14301482|14301482|14301482|14301482|14301482|14301482 14302276|14302276|14302276|14302276|14302276|14302276|14302276 GAATTG 6mer2-7 dme-miR-932-5p 3R + 14302225 14302278 3'utr CG12207 FlyBase G32312.1 CATGTTGTACGTGAGAATGTTTTTTAAAATAAAGTGAGAATTGTGTTGGAACAA 13 14302266 0.977309024 6 13 89 1 1.255272505 0 0.153846154 0.388888889 13 0 0 18 3R:14302225-14302278 6 9 1763 FBgn0038220 244.6666667 14.73 22.60333333 0.036784741 0.610997963 0.398171361 -4 -4 -4 0.25 dme-miR-34-5p 7mer-A1 ACTGCCA 3R 14319837 14319843 + 3R_14319837_14319843_+ 0.760900436 0.750715123 0.75580778 0.007202095 pr-set7 FBtr0082930 14318757 14320494 3R + 14319720 14319876 3'utr pr-set7 FlyBase G42774.1 AAGAGATGATGATGTTGATGAAGCCACGCATTCACATTGACAAGAATCGATTGTACACTATTTATATAGATATTTATATTAGATACATGTGTAATTTCTAACTATTACGTACTATTTACTGCCATAGAGCTATACACTCCCCCTCGCACCTGTCCCA 125 14319835 0.982639671 11 119 899 0.929032258 2.158362492 0.135483871 0.184 0.341935484 125 11 0 144 3R:14319720-14319876 7 pr-set7 FBtr0082930 14318757 14320494 ACTGCCA 7mer-A1 dme-miR-34-5p 3R + 14319806 14319864 3'utr pr-set7 FlyBase G32324.1 ATGTGTAATTTCTAACTATTACGTACTATTTACTGCCATAGAGCTATACACTCCCCCTC 56 14319835 0.983604819 7 50 391 0.94047619 1.420505837 0.202380952 0.375 0.583333333 56 3 2 79 3R:14319806-14319864 7 80.5 1764 FBgn0011474 544.8566667 15.96333333 24.49 0.147745279 5.042806431 3.287055941 2 2 2 0.25 dme-bantam-3p 7mer-m8 TGATCTC 3R 14320604 14320610 - 3R_14320604_14320610_- 0.353404911 0.368061885 0.360733398 0.010364064 Afti FBtr0310001 14320189 14321785 3R - 14320521 14320662 3'utr Afti FlyBase G51003.1 AGAAGAACTCCCATGCATTCCAAGTGTAAATGAGTGTGACTGGTTGCCATGATGATCTCCAGGTAATCGCTGGAAAACGAAACCCAATCCGCTCCAGTTCTTGATTATTGTTTTGTTCGTGTTAATGTGTTTTCATTTATTT 172 14320610 0.986334636 13 162 1176 0.947368421 1.77815125 0.336842105 0.093023256 0.178947368 172 8 2 180 3R:14320521-14320662 7 Afti FBtr0310001 14320189 14321785 TGATCTC 7mer-m8 dme-bantam-3p 3R - 14320525 14320635 3'utr Afti FlyBase G38537.1 AAATGAGTGTGACTGGTTGCCATGATGATCTCCAGGTAATCGCTGGAAAACGAAACCCAATCCGCTCCAGTTCTTGATTATTGTTTTGTTCGTGTTAATGTGTTTTCATTT 117 14320610 0.992688842 13 113 743 0.950819672 2.240549248 0.273224044 0.41025641 0.62295082 117 9 0 174 3R:14320525-14320635 7 108.5 1765 FBgn0038223 625.08 17.01666667 26.15666667 0.173577782 6.376101861 4.14808207 0 0 0 0.25 dme-miR-8-3p 8mer-A1 CAGTATTA 3R 14321636 14321643 - 3R_14321636_14321643_- 0.651109048 0.618248217 0.634678633 0.023236095 Afti FBtr0310001|FBtr0310000|FBtr0273391 14320189|14321075|14321377 14321785|14321785|14321785 3R - 14321469 14321680 3'utr Afti FlyBase G51009.1 TAGGCGAAAGGATCGATCGCGCACCCGGGTAGCCAGTCAGTATTATGAATCCGTCTGATATTCACCATAATCCGAACCGTCACACATTGTAGTTTTGAGGCAAGCTGTGTTCCATGTTGTTGTCGTTGTTGTTAACCTTGTCGTTGGCATAATTGTTGTTGTTGTTGTGCATGCATGTTGTAGTCTTAGGCGTAAAAATCAGGATTTAGAAC 207 14321644 0.93296828 36 192 1460 0.923076923 1.755874856 0.295546559 0.169082126 0.303643725 207 16 3 228 3R:14321469-14321680 8 Afti FBtr0310001|FBtr0310000|FBtr0273391 14320189|14321075|14321377 14321785|14321785|14321785 CAGTATTA 8mer-A1 dme-miR-8-3p 3R - 14321483 14321678 3'utr Afti FlyBase G38542.1 GGCGAAAGGATCGATCGCGCACCCGGGTAGCCAGTCAGTATTATGAATCCGTCTGATATTCACCATAATCCGAACCGTCACACATTGTAGTTTTGAGGCAAGCTGTGTTCCATGTTGTTGTCGTTGTTGTTAACCTTGTCGTTGGCATAATTGTTGTTGTTGTTGTGCATGCATGTTGTAGTCTTAGGCGTAAAAA 124 14321644 0.981708501 25 108 858 0.882926829 2.257678575 0.27804878 0.411290323 0.643902439 124 24 0 181 3R:14321483-14321678 8 70 1766 FBgn0038223 625.08 17.01666667 26.15666667 0.111985666 4.113614104 2.67618198 1 1 1 0.25 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 14327697 14327702 + 3R_14327697_14327702_+ 0.913326112 0.9983881 0.955857106 0.060147917 CG3321 FBtr0082931|FBtr0082932|FBtr0303795 14327535|14327535|14327535 14327735|14327735|14327735 3R + 14327671 14327724 3'utr CG3321 FlyBase G42778.1 CGTTTTTGTGTTTTCCTCTGATGCTTGTGCAAAAAACAGAATGTTCGAAATTAA 15 14327693 0.989141134 6 14 129 0.894736842 1.230448921 0.315789474 0.266666667 0.421052632 15 2 0 17 3R:14327671-14327724 6 CG3321 FBtr0303795|FBtr0082931|FBtr0082932 14327535|14327535|14327535 14327735|14327735|14327735 GTGCAA 6mer3-8 dme-miR-92b-3p 3R + 14327668 14327705 3'utr CG3321 FlyBase G32325.1 TATCGTTTTTGTGTTTTCCTCTGATGCTTGTGCAAAAA 5 14327692 0.984175576 4 5 41 1 0.903089987 0 0.6 0.75 5 0 0 8 3R:14327668-14327705 6 8 1767 FBgn0038224 1345.333333 334.8866667 513.9866667 0.005946482 0.023888679 0.015564606 4 5 4.5 0.25 dme-miR-305-5p 7mer-A1 GTACAAA 3R 14329789 14329795 - 3R_14329789_14329795_- 0.688898368 0.687777751 0.68833806 0.000792384 NK7.1 FBtr0306742 14329411 14330223 3R - 14329783 14329810 3'utr NK7.1 FlyBase G51024.1 ATTTATTGAGTGTTTGTACAAAAAAGGA 32 14329797 0.60890308 3 31 164 0.977272727 1.33243846 0.363636364 0.28125 0.477272727 32 0 1 43 3R:14329783-14329810 7 NK7.1 FBtr0306742 14329411 14330223 GTACAAA 7mer-A1 dme-miR-305-5p 3R - 14329782 14329810 3'utr NK7.1 FlyBase G38550.1 ATTTATTGAGTGTTTGTACAAAAAAGGAA 11 14329797 0.931052901 2 10 61 0.857142857 1.079181246 0.214285714 0.272727273 0.428571429 11 2 0 12 3R:14329782-14329810 7 21.5 1768 FBgn0024321 1080.813333 40.77666667 62.79666667 0.019892427 0.527262323 0.342374861 2 2 2 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 14329921 14329927 - 3R_14329921_14329927_- 0.744979232 0.74595777 0.745468501 0.000691975 NK7.1 FBtr0306742|FBtr0306742|FBtr0306742 14329411|14329411|14329411 14330223|14330223|14330223 3R - 14329816 14329964 3'utr NK7.1 FlyBase G51025.1 CTATGGCAAATTGTAATCTGAACTTTTGAGAATTTCATGTGATAATGTATACGAGGCGATTACAAAATTGATTTTACTACTTGAACTATGAACTATACTATGTATGTAGGCCTGTAAGCTCTGCTACCCTGTAAATTGCAATTGAATGA 50 14329931 0.985662963 17 44 364 0.911764706 1.491361694 0.588235294 0.22 0.426470588 50 5 1 62 3R:14329816-14329964 7 NK7.1 FBtr0306742|FBtr0306742|FBtr0306742 14329411|14329411|14329411 14330223|14330223|14330223 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 14329885 14329962 3'utr NK7.1 FlyBase G38552.1 ATGGCAAATTGTAATCTGAACTTTTGAGAATTTCATGTGATAATGTATACGAGGCGATTACAAAATTGATTTTACTAC 46 14329931 0.988247724 10 38 348 0.825396825 0.937852093 0.492063492 0.304347826 0.492063492 46 6 5 52 3R:14329885-14329962 7 36 1769 FBgn0024321 1080.813333 40.77666667 62.79666667 0.033308249 0.882857844 0.573278836 4 4 4 0.25 dme-miR-263a-5p 6mer3-8 GTGCCA 3R 14330190 14330195 - 3R_14330190_14330195_- 0.908234414 0.911509167 0.90987179 0.002315633 NK7.1 FBtr0306742|FBtr0082941|FBtr0082942|FBtr0347151 14329411|14330138|14330138|14330138 14330223|14330223|14330223|14330223 3R - 14330161 14330212 3'utr NK7.1 FlyBase G51028.1 CACAGTCAAATTAACTTGTGCCAAAAAGTCGAATATTGCTCATCCACAAAGA 12 14330194 0.964303215 3 12 62 1 1.230448921 0 0.333333333 0.529411765 12 0 0 17 3R:14330161-14330212 6 NK7.1 FBtr0347151|FBtr0082942|FBtr0082941|FBtr0306742 14330138|14330138|14330138|14329411 14330223|14330223|14330223|14330223 GTGCCA 6mer3-8 dme-miR-263a-5p 3R - 14330175 14330205 3'utr NK7.1 FlyBase G38554.1 AAATTAACTTGTGCCAAAAAGTCGAATATTG 7 14330195 0.757781504 3 6 33 0.888888889 0.903089987 0 0.142857143 0.333333333 7 1 0 8 3R:14330175-14330205 6 8.5 1770 FBgn0024321 1080.813333 40.77666667 62.79666667 0.007864448 0.208452546 0.135357503 -1 0 -0.5 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 3R 14358544 14358549 - 3R_14358544_14358549_- 0.911712397 0.92251569 0.917114043 0.007639087 CG31320 FBtr0082943 14358354 14358599 3R - 14358537 14358570 5'utr CG31320 FlyBase G51039.1 ATTAGATTTATTTTACCAATTTGTGTTGCAAATT 12 14358550 0.783606642 3 11 143 0.923076923 1.079181246 0 0.083333333 0.153846154 12 1 0 12 3R:14358537-14358570 6 CG31320 FBtr0082943 14358354 14358599 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 14358532 14358566 5'utr CG31320 FlyBase G38560.1 GATTTATTTTACCAATTTGTGTTGCAAATTAAGCT 6 14358549 0.747476916 2 6 62 1 0.954242509 0.222222222 0.5 0.666666667 6 0 0 9 3R:14358532-14358566 6 9 1771 FBgn0051320 281 9.873333333 15.10666667 0.03202847 0.911546253 0.59576346 1 0 0.5 0.25 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3R 14619499 14619505 - 3R_14619499_14619505_- 0.414915795 0.425142028 0.420028911 0.007231015 put FBtr0334030 14619028 14621033 3R - 14619482 14619523 3'utr put FlyBase G51116.1 AATTTGTATATTTTCCATTGGTGCTGAAACATCATTACGACG 36 14619506 0.779326452 2 35 298 0.976744186 1.62324929 0.023255814 0.166666667 0.302325581 36 1 0 42 3R:14619482-14619523 7 put FBtr0334030 14619028 14621033 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3R - 14619488 14619527 3'utr put FlyBase G38611.1 ATTTAATTTGTATATTTTCCATTGGTGCTGAAACATCATT 24 14619506 0.78849297 2 24 213 1 1.531478917 0.029411765 0.333333333 0.529411765 24 0 0 34 3R:14619488-14619527 7 30 1772 FBgn0003169 711.0033333 31.18333333 47.85 0.042193895 0.962052378 0.626959248 1 1 1 0.25 dme-miR-1012-3p 6mer3-8 TTGACT 3R 14620629 14620634 - 3R_14620629_14620634_- 0.873746865 0.798996794 0.836371829 0.052856303 put FBtr0330227|FBtr0082977|FBtr0334030 14620328|14620328|14619028 14621021|14621033|14621033 3R - 14620602 14620700 3'utr put FlyBase G51120.1 AACTTTGAACAAAGAGCATTAGCTATGTCCAGAGACGTGGTAGTTGCTAATCCGACATTGACTTCATTGACTGATAACCATATATAGTTCTATATAAAT 669 14620634 0.717071033 20 623 5039 0.933174224 1.570987458 0.087112172 0.191330344 0.354415274 669 36 20 782 3R:14620602-14620700 6 put FBtr0334030|FBtr0330227|FBtr0082977 14619028|14620328|14620328 14621033|14621021|14621033 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 14620451 14620686 3'utr put FlyBase G38612.1 AGCATTAGCTATGTCCAGAGACGTGGTAGTTGCTAATCCGACATTGACTTCATTGACTGATAACCATATATAGTTCTATATAAATCATACATATAACGTACAATTTGTTTTGCCCTCTGGCAGTAGCCTGTGTGCATATGTAAACTGTTGAAAATTATCGTCAAGCCTTTTAAAGTATAATTTTATTTGTACGTTATCGAATGTCTTCATATAGTAGTAGTTTTATATTTAAAGTT 551 14620634 0.826500775 27 505 4201 0.921857305 1.419262711 0.07587769 0.406533575 0.629671574 551 39 30 814 3R:14620451-14620686 6 573 1773 FBgn0003169 711.0033333 31.18333333 47.85 0.805903395 18.37520043 11.97492163 0 0 0 0.25 dme-miR-980-3p 7mer-A1 GCAGCTA 3R 14620882 14620888 - 3R_14620882_14620888_- 0.822909055 0.823349442 0.823129248 0.000311339 put FBtr0330227|FBtr0082977|FBtr0334030 14620328|14620328|14619028 14621021|14621033|14621033 3R - 14620860 14621005 3'utr put FlyBase G51122.1 CGGATCTGTGGCTCTGCAAAAAAATCAGTTGAAGCTTTTTGCTTCGTAGTGGATAGTTGATCGTCGAGGTCGTAAGACGTTTCGTTTTTAGTTTAATAGTTTGTAGTACCATTATAAGCAGCTATAGAATGGGTTGATTTATACGA 84 14620881 0.972997113 21 71 721 0.862745098 1.467361417 0.176470588 0.178571429 0.323529412 84 12 2 88 3R:14620860-14621005 7 put FBtr0334030|FBtr0330227|FBtr0082977 14619028|14620328|14620328 14621033|14621021|14621033 GCAGCTA 7mer-A1 dme-miR-980-3p 3R - 14620862 14620916 3'utr put FlyBase G38614.1 AGTTTAATAGTTTGTAGTACCATTATAAGCAGCTATAGAATGGGTTGATTTATAC 38 14620892 0.794423129 12 30 352 0.777777778 1.322219295 0.018518519 0.342105263 0.537037037 38 11 1 42 3R:14620862-14620916 7 43.5 1774 FBgn0003169 711.0033333 31.18333333 47.85 0.061181148 1.394975949 0.909090909 -7 4 -1.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 14642862 14642867 - 3R_14642862_14642867_- 0.889575435 0.874471023 0.882023229 0.010680424 l(3)L1231 FBtr0344158|FBtr0344158|FBtr0344158 14642670|14642670|14642670 14644934|14644934|14644934 3R - 14642836 14642890 3'utr l(3)L1231 FlyBase G51131.1 ATTTTGTAATTTACGTGCATTTTTGTGATCTAATTTGTGTAACTATTATAAACGA 674 14642868 0.652736499 18 646 7278 0.958041958 1.914871818 0.350815851 0.221068249 0.388111888 674 27 9 822 3R:14642836-14642890 6 l(3)L1231 FBtr0344158|FBtr0344158|FBtr0344158 14642670|14642670|14642670 14644934|14644934|14644934 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 14642807 14643189 3'utr l(3)L1231 FlyBase G38623.1 TATGAATTCGTTCTTGAGTTAGTTGATTACCGATTACCGGGTTCACTTGATTACCGATTGAGTTGGCCCGCACTTTACTCTGATCTACTTCGCTGTGCAAGTGACGCGAACAAAATTAATGTCCTTTTTGTAGCGAAACTACAAAACCATGTATTTGATTATATGCTTTAAACCCTATTTTTATAACACTTTAATTTGTAAGAACTGTAGCGATGAACCTACAACCCCGCATCCCTCCAGTAGCCGCCTCTTTTTCACCATTTGAAGTTTTGTCTGTTTTCGGTATGAGGTACAATTTCATTTTGTAATTTACGTGCATTTTTGTGATCTAATTTGTGTAACTATTATAAACGAAAAAAAAAAGAAATACAAAATACTTTAAG 663 14642868 0.990762597 60 621 6423 0.947013487 1.816462259 0.265895954 0.404223228 0.619460501 663 41 14 983 3R:14642807-14643189 6 567 1775 FBgn0086686 1443.953333 29.16666667 44.69666667 0.39267197 19.44 12.68550973 1 1 1 0.25 dme-miR-283-5p 6mer3-8 TGATAT 3R 14643255 14643260 - 3R_14643255_14643260_- 0.97869142 0.999995023 0.989343221 0.01506392 l(3)L1231 FBtr0344158 14642670 14644934 3R - 14643208 14643383 3'utr l(3)L1231 FlyBase G51133.1 ACGTTAATGCACCACCCATGGCACACTCAAACACTTGCATCTTTCATAGGAACTTTCGTTTGGGCATAGCGAAACGATAGAGCAGAAGGAACTACTTTAAAGATAATGGAACTCTGTAAAATATGATATATAATAATTCCCCCACACTCTCACTCTCTATCTCTAAAACCCTATAT 28 14643269 0.943638896 17 27 173 0.96875 1.491361694 0.125 0.107142857 0.21875 28 1 0 31 3R:14643208-14643383 6 l(3)L1231 FBtr0344158 14642670 14644934 TGATAT 6mer3-8 dme-miR-283-5p 3R - 14643207 14643331 3'utr l(3)L1231 FlyBase G38624.1 CTTTCGTTTGGGCATAGCGAAACGATAGAGCAGAAGGAACTACTTTAAAGATAATGGAACTCTGTAAAATATGATATATAATAATTCCCCCACACTCTCACTCTCTATCTCTAAAACCCTATATA 25 14643287 0.802808474 14 24 161 0.942857143 1.51851394 0.085714286 0.36 0.542857143 25 2 0 33 3R:14643207-14643331 6 4 1776 FBgn0086686 1443.953333 29.16666667 44.69666667 0.002770173 0.137142857 0.089492132 9 27 18 0.25 dme-miR-965-3p 7mer-m8 TACGCTT 3R 14643610 14643616 - 3R_14643610_14643616_- 0.384553484 0.415840827 0.400197155 0.022123462 l(3)L1231 FBtr0344158 14642670 14644934 3R - 14643557 14643656 3'utr l(3)L1231 FlyBase G51134.1 ATATTTATACAACAATACACAAAACAAGCAAGAAAACTGTTACGCTTTAAAATACGATATATACCGCTCACTGGAGACCGATCCCCAAATCACAGCCCTC 854 14643617 0.968733296 12 842 4678 0.986434109 2.229596528 0.076550388 0.162763466 0.307170543 854 9 5 1018 3R:14643557-14643656 7 l(3)L1231 FBtr0344158 14642670 14644934 TACGCTT 7mer-m8 dme-miR-965-3p 3R - 14643508 14643638 3'utr l(3)L1231 FlyBase G38625.1 ACAAAACAAGCAAGAAAACTGTTACGCTTTAAAATACGATATATACCGCTCACTGGAGACCGATCCCCAAATCACAGCCCTCAAGAAAACAAAACAAAAAAATTCACACCCAAACCATTCCATCTCCATCC 604 14643617 0.968729591 13 595 3317 0.982778416 2.330413773 0.09184845 0.324503311 0.531572905 604 12 3 856 3R:14643508-14643638 7 713 1777 FBgn0086686 1443.953333 29.16666667 44.69666667 0.493783271 24.44571429 15.95197256 1 1 1 0.25 dme-miR-988-3p 8mer-A1 ACAAGGGA 3R 14644095 14644102 - 3R_14644095_14644102_- 0.570404674 0.604386356 0.587395515 0.024028691 l(3)L1231 FBtr0344158 14642670 14644934 3R - 14644045 14644129 3'utr l(3)L1231 FlyBase G51138.1 AAACACCAACACACATACATACAACGTACAAGGGACTAGTTTGAAACCGCGAATCGTATTACTAAATATATATACAACTATATAT 330 14644103 0.925916552 13 301 1526 0.920716113 2.255272505 0.046035806 0.151515152 0.283887468 330 30 1 360 3R:14644045-14644129 8 l(3)L1231 FBtr0344158 14642670 14644934 ACAAGGGA 8mer-A1 dme-miR-988-3p 3R - 14644047 14644125 3'utr l(3)L1231 FlyBase G38630.1 ACCAACACACATACATACAACGTACAAGGGACTAGTTTGAAACCGCGAATCGTATTACTAAATATATATACAACTATAT 191 14644103 0.864646904 14 164 922 0.868327402 1.387389826 0.088967972 0.35078534 0.558718861 191 28 9 244 3R:14644047-14644125 8 225.5 1778 FBgn0086686 1443.953333 29.16666667 44.69666667 0.156168482 7.731428571 5.04511895 1 1 1 0.25 dme-miR-932-5p 6mer2-7 GAATTG 3R 14644229 14644234 - 3R_14644229_14644234_- 0.990346634 0.817088661 0.903717647 0.122511836 l(3)L1231 FBtr0344158 14642670 14644934 3R - 14644204 14644294 3'utr l(3)L1231 FlyBase G51140.1 TGTTTAAAAATTTTGTGAACGCATTTACAACAACAACCACAACACCATACACTCAAATGAGAATTGCAAGAACTACGAAAACAAAACAGGT 42 14644230 0.957889115 8 40 193 0.962264151 1.707570176 0.150943396 0.214285714 0.377358491 42 2 0 51 3R:14644204-14644294 6 l(3)L1231 FBtr0344158 14642670 14644934 GAATTG 6mer2-7 dme-miR-932-5p 3R - 14644212 14644293 3'utr l(3)L1231 FlyBase G38631.1 GTTTAAAAATTTTGTGAACGCATTTACAACAACAACCACAACACCATACACTCAAATGAGAATTGCAAGAACTACGAAAACA 14 14644230 0.96623267 5 13 74 0.916666667 1.342422681 0.208333333 0.642857143 0.791666667 14 2 0 22 3R:14644212-14644293 6 16 1779 FBgn0086686 1443.953333 29.16666667 44.69666667 0.011080691 0.548571429 0.357968529 -4 -4 -4 0.25 dme-miR-278-3p 6mer3-8 CCCACC 3R 14697842 14697847 - 3R_14697842_14697847_- 0.93139307 0.971439153 0.951416111 0.028316869 kibra FBtr0344383 14697687 14698883 3R - 14697713 14697881 3'utr kibra FlyBase G51202.1 TGTTTATGTTTTCACTAACCAGACCCAGCCTCTTCCCACCCCAAAATGTAGCAAGTAGTAGTATGAGTAGAATGAGAGTCGCCACACATATTTTTTCAATACCATAGTAATTTTAGTTGTAATAAATTATATGAAAGTGAACCTGTATATTGTAATTGTGCAATAAACA 30 14697849 0.975370804 14 27 167 0.951219512 1.591064607 0.073170732 0.2 0.414634146 30 2 0 39 3R:14697713-14697881 6 kibra FBtr0344383 14697687 14698883 CCCACC 6mer3-8 dme-miR-278-3p 3R - 14697816 14697868 3'utr kibra FlyBase G38686.1 ACTAACCAGACCCAGCCTCTTCCCACCCCAAAATGTAGCAAGTAGTAGTATGA 13 14697849 0.73934675 4 11 38 0.708333333 1.230448921 0 0.538461538 0.75 13 7 0 17 3R:14697816-14697868 6 11 1780 FBgn0262127 353.3166667 7.533333333 11.64333333 0.031133544 1.460176991 0.944746636 2 2 2 0.25 dme-miR-1012-3p 6mer3-8 TTGACT 3R 14698004 14698009 - 3R_14698004_14698009_- 0.968905314 0.998308362 0.983606838 0.020791131 kibra FBtr0344383 14697687 14698883 3R - 14697978 14698076 3'utr kibra FlyBase G51204.1 CATAAAAGTGAGAGAAAATATAAAATTAAACCTTGTTATGCTTTCCCAAGCGGACCTGTTAAAACTGTTGACTTTGAAACTGTGCCGTGGTGCACTGAG 22 14698003 0.806828484 13 22 151 1 1.397940009 0.2 0.136363636 0.24 22 0 0 25 3R:14697978-14698076 6 kibra FBtr0344383 14697687 14698883 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 14697981 14698051 3'utr kibra FlyBase G38687.1 TTAAACCTTGTTATGCTTTCCCAAGCGGACCTGTTAAAACTGTTGACTTTGAAACTGTGCCGTGGTGCACT 16 14698009 0.983872482 8 15 117 0.961538462 1.397940009 0.153846154 0.375 0.615384615 16 1 0 25 3R:14697981-14698051 6 13.5 1781 FBgn0262127 353.3166667 7.533333333 11.64333333 0.038209349 1.792035398 1.159461781 -6 0 -3 0.25 dme-miR-980-3p 7mer-A1 GCAGCTA 3R 14698372 14698378 - 3R_14698372_14698378_- 0.822863587 0.821947731 0.822405659 0.000647639 kibra FBtr0344383 14697687 14698883 3R - 14698300 14698514 3'utr kibra FlyBase G51207.1 AAAAACCAAGAAACAAGGAATATCAACACAATAACGCGCACATTGTGCGTTCAATGCCTTCAAATTCATATTGAAACCAACTGTATTCTTAAGACTTGAGCAAAAATTATACGAATGTTTATGAATATTTTTATACGCAGCTAGTTAGGATAGTTAACCCAAGCCACATATACACAAAACGTGAGGAGAACGTAAAATATTTATTATACTGATGG 73 14698383 0.99947005 30 68 537 0.938271605 1.880813592 0.160493827 0.109589041 0.197530864 73 5 0 76 3R:14698300-14698514 7 kibra FBtr0344383 14697687 14698883 GCAGCTA 7mer-A1 dme-miR-980-3p 3R - 14698205 14698473 3'utr kibra FlyBase G38689.1 ATTGTGCGTTCAATGCCTTCAAATTCATATTGAAACCAACTGTATTCTTAAGACTTGAGCAAAAATTATACGAATGTTTATGAATATTTTTATACGCAGCTAGTTAGGATAGTTAACCCAAGCCACATATACACAAAACGTGAGGAGAACGTAAAATATTTATTATACTGATGGATCGATCGACGTCGCGCTCGAATCCAGTCGTTTAGGTTAGTTAGCTTGCGTTTTTGTTAAGCTTAAAACGAATTCTTATACTGTAATTTTTTTTA 41 14698383 0.986053456 23 37 338 0.929824561 1.72427587 0.175438596 0.341463415 0.526315789 41 4 0 53 3R:14698205-14698473 7 23 1782 FBgn0262127 353.3166667 7.533333333 11.64333333 0.06509741 3.053097345 1.97537933 5 5 5 0.25 dme-miR-980-5p 6mer3-8 GAAAAA 3R 14732766 14732771 - 3R_14732766_14732771_- 0.537309483 0.792182994 0.664746238 0.18022278 eff FBtr0336876|FBtr0083018|FBtr0310554 14732412|14732703|14732703 14733494|14733494|14733494 3R - 14732738 14732795 3'utr eff FlyBase G51245.1 AAAACTACAAATAAAAATCAGCTGGAAAAATTATTATTATTATTATTATATTATATTT 16 14732778 0.963372229 4 14 102 0.894736842 1.230448921 0 0.1875 0.315789474 16 2 0 17 3R:14732738-14732795 6 eff FBtr0083018|FBtr0310554|FBtr0336876 14732703|14732703|14732412 14733494|14733494|14733494 GAAAAA 6mer3-8 dme-miR-980-5p 3R - 14732754 14732854 3'utr eff FlyBase G38719.1 AAAGCTAGACAGCTACCAACAACAGCATCAACATAATAAGTTTAAATACAAAGAAAAACAAAACTACAAATAAAAATCAGCTGGAAAAATTATTATTATTA 10 14732778 0.929790846 6 9 38 1 1.113943352 0 0.2 0.384615385 10 0 0 13 3R:14732754-14732854 6 10 1783 FBgn0011217 11311.32 849.8066667 1308.386667 0.00088407 0.011767382 0.007643001 7 7 7 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 3R 14791755 14791760 + 3R_14791755_14791760_+ 0.994144428 0.999414225 0.996779327 0.003726311 jvl FBtr0305694 14791293 14793735 3R + 14791741 14791773 3'utr jvl FlyBase G42822.1 AATTTAACAATGACTGTGTTGCCAATAGGAGTA 12 14791759 0.649346572 4 11 77 0.928571429 0.812913357 0.142857143 0.166666667 0.285714286 12 0 1 13 3R:14791741-14791773 6 jvl FBtr0305694 14791293 14793735 TGTGTT 6mer3-8 dme-miR-317-3p 3R + 14791741 14791772 3'utr jvl FlyBase G32355.1 AATTTAACAATGACTGTGTTGCCAATAGGAGT 12 14791758 0.667274197 5 11 74 0.941176471 1.204119983 0.176470588 0.25 0.470588235 12 1 0 16 3R:14791741-14791772 6 12 1784 FBgn0263929 908.0433333 17.64333333 26.93 0.013215228 0.680143586 0.445599703 -4 -3 -3.5 0.25 dme-miR-34-5p 7mer-m8 CACTGCC 3R 14792248 14792254 + 3R_14792248_14792254_+ 0.55822222 0.680521261 0.61937174 0.086478523 jvl FBtr0305694 14791293 14793735 3R + 14792179 14792271 3'utr jvl FlyBase G42823.1 TGCTATTGCTTTGGGTTTGGGTCGTTGACTCAACACTTGGCTAGTGAAAGGTGCATCCTATCAAACTCTCACTGCCTATCGATGCCTTAGGTG 15 14792247 0.973657867 6 15 94 1 1.255272505 0.277777778 0.2 0.333333333 15 0 0 18 3R:14792179-14792271 7 jvl FBtr0305694 14791293 14793735 CACTGCC 7mer-m8 dme-miR-34-5p 3R + 14792233 14792258 3'utr jvl FlyBase G32356.1 ATCCTATCAAACTCTCACTGCCTATC 5 14792247 0.746062544 2 5 27 1 0.903089987 0 0.6 0.75 5 0 0 8 3R:14792233-14792258 7 6 1785 FBgn0263929 908.0433333 17.64333333 26.93 0.006607614 0.340071793 0.222799851 1 1 1 0.25 dme-miR-1012-3p 6mer3-8 TTGACT 3R 14793554 14793559 + 3R_14793554_14793559_+ 0.844878482 0.853156294 0.849017388 0.005853289 jvl FBtr0305690|FBtr0305694|FBtr0305693 14793489|14791293|14793489 14795868|14793735|14795868 3R + 14793523 14793613 3'utr jvl FlyBase G42826.1 CCATATTCGTGGACTAAAGGTGGTGTACTGATTGACTGATTGATTGACGTGTTGGTGGTGAATACATATATTTCGACTGCATGCCAAAAAT 22 14793554 0.985002362 8 22 178 1 1.414973348 0.538461538 0.181818182 0.307692308 22 0 0 26 3R:14793523-14793613 6 jvl FBtr0305691|FBtr0305689|FBtr0305694|FBtr0305690|FBtr0305693 14793489|14793489|14791293|14793489|14793489 14793607|14793607|14793735|14795868|14795868 TTGACT 6mer3-8 dme-miR-1012-3p 3R + 14793531 14793571 3'utr jvl FlyBase G32359.1 GTGGACTAAAGGTGGTGTACTGATTGACTGATTGATTGACG 12 14793554 0.953379137 4 12 99 1 1.255272505 0.5 0.416666667 0.611111111 12 0 0 18 3R:14793531-14793571 6 14 1786 FBgn0263929 908.0433333 17.64333333 26.93 0.015417766 0.79350085 0.51986632 0 0 0 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 3R 14889144 14889149 - 3R_14889144_14889149_- 0.983233685 0.992695054 0.98796437 0.00669022 CycC FBtr0083010 14889002 14889193 3R - 14889100 14889182 3'utr CycC FlyBase G51267.1 AATCATTCATCATTAGCTGGTATTGCCCAATTGTGTGTTTGTACTCATATTACCAATGTATTTATGCCAATTAAACGAAAGTT 16 14889152 0.937424872 9 14 149 0.904761905 0.801632346 0.095238095 0.1875 0.380952381 16 0 2 19 3R:14889100-14889182 6 CycC FBtr0083010 14889002 14889193 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 14889096 14889170 3'utr CycC FlyBase G38736.1 TTAGCTGGTATTGCCCAATTGTGTGTTTGTACTCATATTACCAATGTATTTATGCCAATTAAACGAAAGTTTAAG 15 14889152 0.990981206 6 15 155 1 1.278753601 0.210526316 0.266666667 0.421052632 15 0 0 19 3R:14889096-14889170 6 10 1787 FBgn0004597 134.3233333 14.61666667 22.44333333 0.074447229 0.684150513 0.445566612 3 3 3 0.25 dme-miR-14-3p 7mer-A1 AGACTGA 3R 14896416 14896422 + 3R_14896416_14896422_+ 0.817813425 0.821413216 0.819613321 0.002545443 CG14860 FBtr0289976 14895685 14896446 3R + 14896374 14896437 3'utr CG14860 FlyBase G42849.1 ACTGGCGGAAGAGTCCACTAAAAACACAAGAGACTAGACTTTAGACTGACTGAATAAATGTAAC 25 14896414 0.964034274 6 25 129 1 1.431363764 0.259259259 0.08 0.148148148 25 0 0 27 3R:14896374-14896437 7 CG14860 FBtr0289976 14895685 14896446 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 14896391 14896437 3'utr CG14860 FlyBase G32381.1 CTAAAAACACAAGAGACTAGACTTTAGACTGACTGAATAAATGTAAC 19 14896414 0.959361002 5 19 95 1 1.491361694 0.096774194 0.526315789 0.709677419 19 0 0 31 3R:14896391-14896437 7 21.5 1788 FBgn0038273 26.21 2.003333333 3.093333333 0.820297596 10.73211314 6.950431034 2 2 2 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 3R 14902524 14902529 - 3R_14902524_14902529_- 0.618952261 0.917747639 0.76834995 0.211280183 VhaPPA1-1 FBtr0083005|FBtr0308030 14902328|14902328 14903233|14903233 3R - 14902508 14902626 3'utr VhaPPA1-1 FlyBase G51289.1 ATCACTCAATCGACTGTGGAGTGTGCACGGTGTGAAAACGACCGTGATTTGTTTATTTCATTTCTTTGCCAAACGAAAGACATCGTGTGTGTGTGTCTGTGTTTGATTTTAAGCAGTTT 34 14902533 0.949568744 16 32 274 0.947368421 1.556302501 0.184210526 0.117647059 0.210526316 34 2 0 36 3R:14902508-14902626 6 VhaPPA1-1 FBtr0308030|FBtr0083005 14902328|14902328 14903233|14903233 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 14902510 14902550 3'utr VhaPPA1-1 FlyBase G38749.1 AAGACATCGTGTGTGTGTGTCTGTGTTTGATTTTAAGCAGT 7 14902533 0.847637649 5 7 79 1 1.079181246 0 0.285714286 0.583333333 7 0 0 12 3R:14902510-14902550 6 9 1789 FBgn0028662 780.9733333 70.53333333 107.34 0.011524081 0.127599244 0.083845724 4 4 4 0.25 dme-miR-965-3p 6mer2-7 ACGCTT 3R 14902713 14902718 - 3R_14902713_14902718_- 0.999913826 0.999996555 0.999955191 5.85E-05 VhaPPA1-1 FBtr0083005|FBtr0308030 14902328|14902328 14903233|14903233 3R - 14902631 14902791 3'utr VhaPPA1-1 FlyBase G51290.1 GGAAATTACGACTCGCTATACGCAGTTACTGCTTGCAGGAGACGCCCGACAAACCGAAATCCGATCAGCCGTAACGCTTTAAACTAGGACTTAGTTACTCATTAAGATGATAGTTGGTTAAGTTGGCAGTTGGTTTTCACGCCTCGCACGCTCGCAGTCAC 128 14902712 0.858986765 26 119 899 0.935064935 1.681241237 0.155844156 0.1640625 0.305194805 128 8 2 144 3R:14902631-14902791 6 VhaPPA1-1 FBtr0308030|FBtr0083005 14902328|14902328 14903233|14903233 ACGCTT 6mer2-7 dme-miR-965-3p 3R - 14902667 14902793 3'utr VhaPPA1-1 FlyBase G38752.1 TTGGAAATTACGACTCGCTATACGCAGTTACTGCTTGCAGGAGACGCCCGACAAACCGAAATCCGATCAGCCGTAACGCTTTAAACTAGGACTTAGTTACTCATTAAGATGATAGTTGGTTAAGTTG 65 14902720 0.931094502 21 61 433 0.913043478 1.62324929 0.195652174 0.323076923 0.52173913 65 7 1 84 3R:14902667-14902793 6 59 1790 FBgn0028662 780.9733333 70.53333333 107.34 0.075546754 0.836483932 0.549655301 -6 2 -2 0.25 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 15080753 15080759 - 3R_15080753_15080759_- 0.646859584 0.497806003 0.572332793 0.105396811 CG6966 FBtr0344380|FBtr0113236 15079318|15080451 15081197|15081197 3R - 15080602 15080782 3'utr CG6966 FlyBase G51302.1 ATGTTTTGAAACTTTCTTTAATATGTGTTCTTGCTACAACATTTTGTATGACTTATCATTAATAGAATATTGTATGTACTTGTACTATATGACCAAAAGCCTGGGCGTGATTGAGCAGCTTAATTTTAATTATCCTGGCATCAAGCCGACTCCTCAACGCTGCAGCAATCACGCCCAAGCC 80 15080752 0.900498151 22 76 655 0.950980392 1.685741739 0.019607843 0.2125 0.382352941 80 4 1 97 3R:15080602-15080782 7 CG6966 FBtr0344380|FBtr0113236 15079318|15080451 15081197|15081197 TGTGTTC 7mer-m8 dme-miR-317-3p 3R - 15080662 15080783 3'utr CG6966 FlyBase G38759.1 AATGTTTTGAAACTTTCTTTAATATGTGTTCTTGCTACAACATTTTGTATGACTTATCATTAATAGAATATTGTATGTACTTGTACTATATGACCAAAAGCCTGGGCGTGATTGAGCAGCTT 50 15080752 0.876621769 18 49 466 0.971428571 1.832508913 0.071428571 0.34 0.528571429 50 2 0 68 3R:15080662-15080783 7 25 1791 FBgn0038286 1338.856667 38.3 58.94666667 0.018672649 0.652741514 0.424112192 -7 -7 -7 0.25 dme-miR-11-3p 7mer-m1 TGTGATG 3R 15080947 15080953 - 3R_15080947_15080953_- 0.381335725 0.425737857 0.403536791 0.031397097 CG6966 FBtr0344380|FBtr0113236 15079318|15080451 15081197|15081197 3R - 15080893 15081078 3'utr CG6966 FlyBase G51303.1 TATCTAATACTACTATGACTACCGTCTATTTACTGTATAATTAGAGATGGAGAGAGAGTTCGAAACTATGCTGAATGATGAATGATGATATGGACGAGATCGTTACTAACGACTGGAAACTGATTTGTGATGTTAGCAAGCGAAGTGCCTGAATCGACGGATCAGGACGATAACTACTACAACTGA 783 15080955 0.979421794 36 718 4953 0.92513369 1.895623422 0.28342246 0.153256705 0.290909091 783 60 10 865 3R:15080893-15081078 7 CG6966 FBtr0344380|FBtr0113236 15079318|15080451 15081197|15081197 TGTGATG 7mer-m1 dme-miR-11-3p 3R - 15080891 15081048 3'utr CG6966 FlyBase G38760.1 TACTGTATAATTAGAGATGGAGAGAGAGTTCGAAACTATGCTGAATGATGAATGATGATATGGACGAGATCGTTACTAACGACTGGAAACTGATTTGTGATGTTAGCAAGCGAAGTGCCTGAATCGACGGATCAGGACGATAACTACTACAACTGACA 541 15080955 0.976444114 29 503 3251 0.931456548 2.103233406 0.298653611 0.390018484 0.596083231 541 51 5 761 3R:15080891-15081048 7 283.5 1792 FBgn0038286 1338.856667 38.3 58.94666667 0.211747835 7.402088773 4.809432255 2 2 2 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 15096529 15096535 - 3R_15096529_15096535_- 0.629621347 0.640576782 0.635099065 0.007746708 CG42788 FBtr0303485|FBtr0303485|FBtr0303485|FBtr0303486|FBtr0303486|FBtr0303486 15095955|15095955|15095955|15095955|15095955|15095955 15097627|15097627|15097627|15097627|15097627|15097627 3R - 15096512 15096551 3'utr CG42788 FlyBase G51320.1 AATCAAAATTTTAACTTGTGATATAAAAAAATGGAAAAAG 23 15096536 0.986396303 4 22 191 0.962962963 1.113943352 0 0.173913043 0.296296296 23 0 1 26 3R:15096512-15096551 7 CG42788 FBtr0303486|FBtr0303486|FBtr0303486|FBtr0303485|FBtr0303485|FBtr0303485 15095955|15095955|15095955|15095955|15095955|15095955 15097627|15097627|15097627|15097627|15097627|15097627 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 15096516 15096554 3'utr CG42788 FlyBase G38768.1 AATAATCAAAATTTTAACTTGTGATATAAAAAAATGGAA 21 15096537 0.664596539 6 20 179 0.96875 1.190331698 0 0.333333333 0.5625 21 0 1 31 3R:15096516-15096554 7 22 1793 FBgn0261859 601.7 10.87666667 16.7 0.036563071 2.022678517 1.317365269 1 2 1.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 15191257 15191264 - 3R_15191257_15191264_- 0.610871945 0.592960877 0.601916411 0.01266499 CG6752 FBtr0306246|FBtr0083029 15191056|15191056 15191305|15191305 3R - 15191236 15191306 stop_codon CG6752 FlyBase G51359.1 AGGAAAAACCCACCGATAGCAATCAAGGAAAGCCCAACCAAATCTAGTCAAACTCCTATGCTTTAAGTGTA 25 15191264 0.943774718 7 22 90 0.888888889 1.079181246 0.222222222 0.08 0.148148148 25 2 1 24 3R:15191236-15191306 8 CG6752 FBtr0306246|FBtr0083029 15191056|15191056 15191305|15191305 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R - 15191236 15191336 stop_codon CG6752 FlyBase G38807.1 AGTCCAGACGCCAATGATCGAGCGGGCCTAAGGAAAAACCCACCGATAGCAATCAAGGAAAGCCCAACCAAATCTAGTCAAACTCCTATGCTTTAAGTGTA 12 15191264 0.936155972 5 9 38 0.888888889 0.903089987 0.166666667 0.5 0.666666667 12 1 1 16 3R:15191236-15191336 8 12.5 1794 FBgn0038296 195.79 5.47 8.353333333 0.063843914 2.285191956 1.496408619 0 0 0 0.25 dme-miR-317-3p 8mer-A1 TGTGTTCA 3R 15257050 15257057 + 3R_15257050_15257057_+ 0.519092165 0.528652242 0.523872203 0.006759941 CG42404 FBtr0305614|FBtr0345173 15255666|15252205 15257765|15257765 3R + 15257013 15257074 3'utr CG42404 FlyBase G42920.1 TTTTGGTTGTAATAGATCTCTGACCTGAAAACTGTATTGTGTTCAACGGATGCTCAAAAAAA 30 15257049 0.709878547 4 30 231 1 1.568201724 0.297297297 0.2 0.351351351 30 0 0 37 3R:15257013-15257074 8 CG42404 FBtr0345173|FBtr0305614 15252205|15255666 15257765|15257765 TGTGTTCA 8mer-A1 dme-miR-317-3p 3R + 15256994 15257071 3'utr CG42404 FlyBase G32430.1 AAAACGGTTCCTGTTCCGCTTTTGGTTGTAATAGATCTCTGACCTGAAAACTGTATTGTGTTCAACGGATGCTCAAAA 28 15257049 0.982652144 5 28 218 1 1.612783857 0.219512195 0.392857143 0.585365854 28 0 0 41 3R:15256994-15257071 8 21.5 1795 FBgn0259823 5.333333333 0.116666667 0.176666667 4.03125 184.2857143 121.6981132 1 1 1 0.25 dme-miR-92b-3p 7mer-m1 TGCAATT 3R 15265039 15265045 + 3R_15265039_15265045_+ 0.666730782 0.744997248 0.705864015 0.055342702 Set FBtr0083062 15265028 15265253 3R + 15265024 15265055 stop_codon Set FlyBase G42925.1 AAGTAAACTGATTAATGCAATTTCAAATCGCT 23 15265035 0.738934862 5 23 157 1 1.447158031 0.035714286 0.217391304 0.357142857 23 0 0 28 3R:15265024-15265055 7 Set FBtr0083062 15265028 15265253 TGCAATT 7mer-m1 dme-miR-92b-3p 3R + 15265024 15265051 stop_codon Set FlyBase G32436.1 AAGTAAACTGATTAATGCAATTTCAAAT 13 15265035 0.657963821 4 12 89 0.9375 1.176091259 0 0.153846154 0.3125 13 1 0 15 3R:15265024-15265051 7 18 1796 FBgn0014879 1526.92 162.5266667 250.57 0.011788437 0.110751056 0.071836213 4 4 4 0.25 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 15270283 15270289 + 3R_15270283_15270289_+ 0.651280285 0.656356872 0.653818579 0.003589698 Zip88E FBtr0290018 15270194 15270532 3R + 15270189 15270310 stop_codon Zip88E FlyBase G42935.1 GGATTAGACATCTTTTCGTTGAGAAATCGTTTCAGCGCTGTGAGAAAATGTGCCGCTTTTTAAACTTAGAACACTTAGGATAATATTATGGATTGGCAGCTGTTAATCTCTTGTGTAAGACT 91 15270282 0.836167379 17 84 783 0.912621359 1.371067862 0.126213592 0.098901099 0.203883495 91 6 3 94 3R:15270189-15270310 7 Zip88E FBtr0290018 15270194 15270532 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 15270184 15270321 stop_codon Zip88E FlyBase G32446.1 GATGAGGATTAGACATCTTTTCGTTGAGAAATCGTTTCAGCGCTGTGAGAAAATGTGCCGCTTTTTAAACTTAGAACACTTAGGATAATATTATGGATTGGCAGCTGTTAATCTCTTGTGTAAGACTTGTTACTTGTG 75 15270281 0.836996111 22 73 663 0.971962617 2.017033339 0.121495327 0.346666667 0.542056075 75 3 0 104 3R:15270184-15270321 7 51.5 1797 FBgn0038312 158.6266667 12.80333333 19.79 0.324661679 4.022390003 2.602324406 1 2 1.5 0.25 dme-miR-184-5p 6mer2-7 GATAAG 3R 15270368 15270373 + 3R_15270368_15270373_+ 0.886516403 0.773343684 0.829930043 0.080025184 Zip88E FBtr0290018 15270194 15270532 3R + 15270329 15270464 3'utr Zip88E FlyBase G42936.1 AACTAATCTTGTTTTAGGTACATTGTCGATCTGCCGTAGGATAAGTAAAAAGTTCAGTCTTCTCGTCTACATTTATATTTTCTCTTTCTCCAAAGTTTGTGTTATTTTTTATGCTTTTATTATATGTAATAAACCT 32 15270351 0.987003131 12 28 269 0.942857143 1.51851394 0.2 0.129032258 0.228571429 31 2 0 33 3R:15270329-15270464 6 Zip88E FBtr0290018 15270194 15270532 GATAAG 6mer2-7 dme-miR-184-5p 3R + 15270337 15270383 3'utr Zip88E FlyBase G32447.1 TTGTTTTAGGTACATTGTCGATCTGCCGTAGGATAAGTAAAAAGTTC 15 15270351 0.672447414 5 14 114 1 1.447158031 0.071428571 0.6 0.785714286 15 0 0 28 3R:15270337-15270383 6 14 1798 FBgn0038312 158.6266667 12.80333333 19.79 0.088257544 1.093465243 0.707427994 17 17 17 0.25 dme-miR-2b-2-5p 6mer2-7 TGAAGA 3R 15270928 15270933 - 3R_15270928_15270933_- 0.992654165 0.931392325 0.962023245 0.043318705 Cp190 FBtr0083127|FBtr0083126 15270430|15270430 15271042|15271042 3R - 15270863 15271020 3'utr Cp190 FlyBase G51457.1 AAGTTTGGCGATTCAACGCAGGTCAGCAGATAAACGCACCTGAGCTCGGCGCGAATTTTCGGTTTCTATTGTAAATTAAATTGTTAATGAAGATCAAGGTGAATGATAAGATATGCATATGCACTGGTTTAAGTGTATAAGATCTAATCTACTCATCT 82 15270933 0.858714814 25 82 444 1 1.995635195 0.050505051 0.146341463 0.292929293 82 0 0 99 3R:15270863-15271020 6 Cp190 FBtr0083126|FBtr0083127 15270430|15270430 15271042|15271042 TGAAGA 6mer2-7 dme-miR-2b-2-5p 3R - 15270884 15271006 3'utr Cp190 FlyBase G38876.1 AACGCAGGTCAGCAGATAAACGCACCTGAGCTCGGCGCGAATTTTCGGTTTCTATTGTAAATTAAATTGTTAATGAAGATCAAGGTGAATGATAAGATATGCATATGCACTGGTTTAAGTGTA 37 15270933 0.974210245 8 35 190 1 1.748188027 0.053571429 0.378378378 0.589285714 37 0 0 56 3R:15270884-15271006 6 34.5 1799 FBgn0000283 4864.516667 141.61 217.1233333 0.007092174 0.243626863 0.158895866 0 0 0 0.25 dme-miR-980-3p 8mer-A1 GGCAGCTA 3R 15304166 15304173 + 3R_15304166_15304173_+ 0.451847406 0.454610736 0.453229071 0.001953948 Tm1 FBtr0089968|FBtr0089960 15303722|15303722 15304972|15304529 3R + 15304115 15304199 5'utr Tm1 FlyBase G42962.1 CGATTACGTCGATATTTTCGATACCATTTCGCAAAATTCGAACGGTTGACTGGCAGCTAGCGCCATTTTACTATACTGTTGCAAT 881 15304165 0.945565852 9 863 3587 0.977055449 2.106360909 0.078393881 0.157775255 0.290630975 881 17 7 1022 3R:15304115-15304199 8 Tm1 FBtr0089960|FBtr0089968 15303722|15303722 15304529|15304972 GGCAGCTA 8mer-A1 dme-miR-980-3p 3R + 15304102 15304187 5'utr Tm1 FlyBase G32465.2 ATTTCGATATTTTCGATTACGTCGATATTTTCGATACCATTTCGCAAAATTCGAACGGTTGACTGGCAGCTAGCGCCATTTTACTA 536 15304165 0.864957285 10 527 2046 0.984486874 2.615423953 0.076372315 0.391791045 0.61097852 536 12 1 825 3R:15304102-15304187 8 704 1800 FBgn0003721 5849.68 316.09 484.7266667 0.120348464 2.227213768 1.452364907 1 1 1 0.25 dme-bantam-3p 6mer3-8 TGATCT 3R 15304848 15304853 + 3R_15304848_15304853_+ 0.993324576 0.998413602 0.995869089 0.003598466 Tm1 FBtr0089968 15303722 15304972 3R + 15304815 15304887 3'utr Tm1 FlyBase G42966.1 CTGCAACAAGAAATGGCATTAAAAATTCTAATTTGATCTATTTACGATTTACATAAATTAATTATTTATACTT 55 15304847 0.990927098 10 53 558 0.971014493 1.826074803 0.014492754 0.218181818 0.376811594 55 2 0 67 3R:15304815-15304887 6 Tm1 FBtr0089968 15303722 15304972 TGATCT 6mer3-8 dme-bantam-3p 3R + 15304772 15304888 3'utr Tm1 FlyBase G32470.1 TGATTCTGAATGCCGTGACACCCAAATGAAGATAAAACGAATGCTGCAACAAGAAATGGCATTAAAAATTCTAATTTGATCTATTTACGATTTACATAAATTAATTATTTATACTTT 44 15304847 0.988145618 12 41 379 0.953125 1.484299839 0.015625 0.363636364 0.5625 44 2 1 61 3R:15304772-15304888 6 41.5 1801 FBgn0003721 5849.68 316.09 484.7266667 0.007094405 0.131291721 0.085615261 1 1 1 0.25 dme-miR-1008-3p 6mer2-7 GCTGTG 3R 15318315 15318320 - 3R_15318315_15318320_- 0.99039064 0.912144955 0.951267798 0.055327994 CG6276 FBtr0083123 15318201 15318439 3R - 15318263 15318338 3'utr CG6276 FlyBase G51492.1 AAGAATCCTTTAAGCTTCGCTGTGCAAGAACAAAGTATCCTTAAAAACGTTTTGAAAACTATCCGGTATGTTTATT 10 15318323 0.976179382 5 9 60 0.9 0.653212514 0 0 0 10 0 1 9 3R:15318263-15318338 6 CG6276 FBtr0083123 15318201 15318439 GCTGTG 6mer2-7 dme-miR-1008-3p 3R - 15318303 15318338 3'utr CG6276 FlyBase G38902.1 AAGAATCCTTTAAGCTTCGCTGTGCAAGAACAAAGT 7 15318323 0.958332996 3 7 37 1 1 0 0.285714286 0.5 7 0 0 10 3R:15318303-15318338 6 7.5 1802 FBgn0038316 98.66666667 6.676666667 10.25333333 0.076013514 1.123315027 0.731469441 3 3 3 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 3R 15324537 15324542 + 3R_15324537_15324542_+ 0.702538806 0.944236343 0.823387574 0.170905941 ear FBtr0334695 15324283 15325279 3R + 15324504 15324562 3'utr ear FlyBase G42978.1 ATTGAAGTCGTCCTTTAGTTTTTGAGACTCATTTGTGTTAAGACTCGTTTCGTTTAAGA 203 15324526 0.738728478 16 197 2210 0.966527197 2.36361198 0.167364017 0.157635468 0.284518828 203 8 0 231 3R:15324504-15324562 6 ear FBtr0334695 15324283 15325279 TGTGTT 6mer3-8 dme-miR-317-3p 3R + 15324475 15324558 3'utr ear FlyBase G32479.1 AAGACCCAATCGATTTCGTTTTTCAAAATATTGAAGTCGTCCTTTAGTTTTTGAGACTCATTTGTGTTAAGACTCGTTTCGTTT 94 15324526 0.99162419 18 89 967 0.944444444 2.133538908 0.097222222 0.372340426 0.590277778 94 8 0 136 3R:15324475-15324558 6 137.5 1803 FBgn0026441 968.99 34.99666667 53.49 0.141900329 3.928945614 2.570573939 11 11 11 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 15325437 15325443 - 3R_15325437_15325443_- 0.709874739 0.692350243 0.701112491 0.012391693 CG6236 FBtr0083122|FBtr0083121 15325323|15325323 15325538|15325538 3R - 15325418 15325501 3'utr CG6236 FlyBase G51496.1 GCTAAGCAATCAACTGGAATAGATTTCTGCACTGATTGTAGATTTTAGATTACTCCTTCCAAAGAATATTGTCACTGGCTCCTT 95 15325445 0.7932172 18 90 749 0.964285714 1.73239376 0.241071429 0.159574468 0.294642857 94 3 1 108 3R:15325418-15325501 7 CG6236 FBtr0083122|FBtr0083121 15325323|15325323 15325538|15325538 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 15325411 15325534 3'utr CG6236 FlyBase G38907.1 TGCACAAAATGACAAGTCCAAAACATAGAAACTGCTAAGCAATCAACTGGAATAGATTTCTGCACTGATTGTAGATTTTAGATTACTCCTTCCAAAGAATATTGTCACTGGCTCCTTAAGTTAA 68 15325445 0.987197544 19 61 526 0.913043478 1.447158031 0.119565217 0.235294118 0.434782609 68 6 2 84 3R:15325411-15325534 7 62 1804 FBgn0038318 770.0133333 38.62666667 58.75333333 0.080518086 1.605108733 1.055259276 2 2 2 0.25 dme-miR-1012-3p 6mer3-8 TTGACT 3R 15342110 15342115 + 3R_15342110_15342115_+ 0.418686991 0.41605083 0.41736891 0.001864075 Aats-ser FBtr0334589 15342088 15343218 3R + 15342046 15342149 stop_codon Aats-ser FlyBase G43022.1 AACGGATACCGGAGACGAAGCTGGTCAAATTCATCAAGGCCTAGGCTTAACACATTCTGTACCTTTGACTGTTATCATTAAATCGTTGGGCTTATCAACGAAAG 222 15342103 0.987810636 18 216 1941 0.975 1.959041392 0.189285714 0.202702703 0.367857143 222 5 2 273 3R:15342046-15342149 6 Aats-ser FBtr0334589 15342088 15343218 TTGACT 6mer3-8 dme-miR-1012-3p 3R + 15342071 15342136 stop_codon Aats-ser FlyBase G32510.1 CAAATTCATCAAGGCCTAGGCTTAACACATTCTGTACCTTTGACTGTTATCATTAAATCGTTGGGC 127 15342103 0.985296864 9 124 1069 0.978947368 1.968482949 0.226315789 0.362204724 0.573684211 127 3 1 186 3R:15342071-15342136 6 169.5 1805 FBgn0021750 239.2133333 16.63 25.6 0.708572543 10.19242333 6.62109375 7 7 7 0.25 dme-miR-1012-3p 6mer3-8 TTGACT 3R 15344215 15344220 - 3R_15344215_15344220_- 0.626723929 0.660119291 0.64342161 0.023614114 Surf4 FBtr0083117 15343651 15344263 3R - 15344057 15344272 stop_codon Surf4 FlyBase G51515.1 AAGTGGTAGAGGCCAGGCAACGGTCGCTCCTTGAACGAAACACTTTCAACATTTGACTTTTACCGTGTTTTACTCCTTCTGAGAAATGTTAGTTAGGAATTACCATAAAATGGGACAACAACAGGAGCAGCATCAGCAGCACAACACCGGCACGTATAAGAACTTGACAATTTTCAATAAAGGGACTTCCGCAATACCCCTCTCCAATGGCTCACT 65 15344213 0.985419434 23 62 495 0.949367089 1.875061263 0.075949367 0.184615385 0.329113924 65 4 0 75 3R:15344057-15344272 6 Surf4 FBtr0083117 15343651 15344263 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 15344165 15344236 3'utr Surf4 FlyBase G38920.1 GAAACACTTTCAACATTTGACTTTTACCGTGTTTTACTCCTTCTGAGAAATGTTAGTTAGGAATTACCATAA 34 15344214 0.987185341 6 33 289 0.98 1.69019608 0.06 0.352941176 0.56 34 1 0 49 3R:15344165-15344236 6 35.5 1806 FBgn0019925 766.2766667 57.29666667 87.82333333 0.046327915 0.619582291 0.404220594 -7 -6 -6.5 0.25 dme-bantam-3p 7mer-m8 TGATCTC 3R 15349509 15349515 + 3R_15349509_15349515_+ 0.661584545 0.661614786 0.661599665 2.14E-05 CG42726 FBtr0303074 15349502 15350391 3R + 15349468 15349553 stop_codon CG42726 FlyBase G43033.1 AAATATTGGTACCAAAAAGAAGAAAACACAAAGTGACGATATGATCTCTAATGAGTTGGCCCTTTTTCAAAGGGGTCCTCTAATTT 123 15349509 0.929379053 9 117 837 0.959459459 1.67516709 0.304054054 0.170731707 0.310810811 123 4 2 142 3R:15349468-15349553 7 CG42726 FBtr0303074 15349502 15350391 TGATCTC 7mer-m8 dme-bantam-3p 3R + 15349491 15349544 stop_codon CG42726 FlyBase G32519.2 AAACACAAAGTGACGATATGATCTCTAATGAGTTGGCCCTTTTTCAAAGGGGTC 79 15349509 0.629600397 6 74 529 0.93495935 2.06069784 0.422764228 0.405063291 0.617886179 79 8 0 115 3R:15349491-15349544 7 95.5 1807 FBgn0261679 36.5 1.936666667 2.98 2.616438356 49.31153184 32.04697987 0 0 0 0.25 dme-miR-317-5p 7mer-A1 TATCCCA 3R 15353678 15353684 + 3R_15353678_15353684_+ 0.589435275 0.807482345 0.69845881 0.154182512 CG5038 FBtr0083089 15353467 15353926 3R + 15353669 15353712 3'utr CG5038 FlyBase G43044.1 ATACATTCATATCCCATCAGCTAAAATCTCATGACACCCTAATT 38 15353690 0.791775568 6 35 232 0.926829268 1.579783597 0 0.078947368 0.146341463 38 3 0 38 3R:15353669-15353712 7 CG5038 FBtr0083089 15353467 15353926 TATCCCA 7mer-A1 dme-miR-317-5p 3R + 15353636 15353713 3'utr CG5038 FlyBase G32523.1 AATTTTAATTCCGTGCAATATTGTATCTATATCATACATTCATATCCCATCAGCTAAAATCTCATGACACCCTAATTG 30 15353690 0.771969573 8 30 195 1 1.643452676 0.022727273 0.4 0.590909091 30 0 0 44 3R:15353636-15353713 7 27.5 1808 FBgn0038324 139.0933333 6.273333333 9.646666667 0.197708972 4.383634431 2.850725639 -12 -12 -12 0.25 dme-miR-7-5p 7mer-m8 GTCTTCC 3R 15358864 15358870 + 3R_15358864_15358870_+ 0.703242798 0.698648009 0.700945403 0.003249014 CG5044 FBtr0083091|FBtr0083090 15358810|15358810 15359263|15359263 3R + 15358834 15358903 3'utr CG5044 FlyBase G43056.1 TTGTTTGAGCCTTGGCATCCAATCCTGTTTGTCTTCCGTTGAGCCGCTCATTCTTATATGCACACAACTT 33 15358872 0.988527127 8 32 296 0.941176471 1.028028724 0.029411765 0.03030303 0.058823529 33 0 2 32 3R:15358834-15358903 7 CG5044 FBtr0083091|FBtr0083090 15358810|15358810 15359263|15359263 GTCTTCC 7mer-m8 dme-miR-7-5p 3R + 15358839 15358916 3'utr CG5044 FlyBase G32535.1 TGAGCCTTGGCATCCAATCCTGTTTGTCTTCCGTTGAGCCGCTCATTCTTATATGCACACAACTTAATATCTTTGTAT 32 15358884 0.988470746 8 29 277 0.957446809 1.653212514 0.106382979 0.40625 0.595744681 32 2 0 45 3R:15358839-15358916 7 19 1809 FBgn0038326 271.75 19.3 29.30333333 0.069917203 0.984455959 0.648390399 -8 -20 -14 0.25 dme-miR-33-5p 7mer-m8 CAATGCA 3R 15359125 15359131 + 3R_15359125_15359131_+ 0.658255335 0.657581272 0.657918303 0.00047659 CG5044 FBtr0083091|FBtr0083090 15358810|15358810 15359263|15359263 3R + 15359076 15359159 3'utr CG5044 FlyBase G43059.1 CGAGGAAGAATCCTATTCGCCGGTATTTACCAATAACGATTGTGAAATTCAATGCATTTAAATATATGATATACATATATGCCT 248 15359124 0.747358497 19 239 2059 0.963934426 1.866287339 0.055737705 0.185483871 0.337704918 248 8 3 294 3R:15359076-15359159 7 CG5044 FBtr0083091|FBtr0083090 15358810|15358810 15359263|15359263 CAATGCA 7mer-m8 dme-miR-33-5p 3R + 15359076 15359147 3'utr CG5044 FlyBase G32537.1 CGAGGAAGAATCCTATTCGCCGGTATTTACCAATAACGATTGTGAAATTCAATGCATTTAAATATATGATAT 138 15359123 0.734142341 17 132 1103 0.97029703 1.593286067 0.059405941 0.333333333 0.544554455 138 2 4 196 3R:15359076-15359147 7 163 1810 FBgn0038326 271.75 19.3 29.30333333 0.599816007 8.445595855 5.56250711 1 2 1.5 0.25 dme-bantam-3p 6mer3-8 TGATCT 3R 15417160 15417165 + 3R_15417160_15417165_+ 0.787900919 0.810817144 0.799359032 0.0162042 Atx2 FBtr0083100|FBtr0344377 15415551|15415551 15417277|15417277 3R + 15417099 15417188 3'utr Atx2 FlyBase G43090.1 TAACAAGAACAATCCGTATTACTTCTTTGCCCGTCATAAATCGGTTTGGTTATATTTCGTATGATCTAGAAGCATCTGTTGTGGTCTGTT 216 15417160 0.989513633 9 213 2063 0.987654321 2.380211242 0.432098765 0.111111111 0.209876543 216 3 0 240 3R:15417099-15417188 6 Atx2 FBtr0083100|FBtr0344377 15415551|15415551 15417277|15417277 TGATCT 6mer3-8 dme-bantam-3p 3R + 15417123 15417188 3'utr Atx2 FlyBase G32559.1 CTTTGCCCGTCATAAATCGGTTTGGTTATATTTCGTATGATCTAGAAGCATCTGTTGTGGTCTGTT 100 15417160 0.919584414 7 95 910 0.952662722 2.206825876 0.455621302 0.46 0.680473373 100 8 0 161 3R:15417123-15417188 6 154.5 1811 FBgn0041188 1154.45 29.14333333 44.74333333 0.133829962 5.301383964 3.453028384 0 0 0 0.25 dme-miR-34-5p 8mer-A1 CACTGCCA 3R 15442401 15442408 - 3R_15442401_15442408_- 0.662175508 0.651128245 0.656651876 0.007811621 AdamTS-A FBtr0334629|FBtr0339398|FBtr0083160 15442244|15442244|15442244 15443238|15443238|15443238 3R - 15442350 15442423 3'utr AdamTS-A FlyBase G51563.1 TTGATTGATTGTTATCACTGCCAGATTTTCAACGTTCAATCGATTGTATCCCAAATCGCCTAAGTCCCGGTACC 62 15442410 0.748186109 15 55 491 0.884057971 1.183269844 0.536231884 0.112903226 0.202898551 62 5 3 61 3R:15442350-15442423 8 AdamTS-A FBtr0083160|FBtr0339398|FBtr0334629 15442244|15442244|15442244 15443238|15443238|15443238 CACTGCCA 8mer-A1 dme-miR-34-5p 3R - 15442277 15442427 3'utr AdamTS-A FlyBase G38954.1 ACTCTTGATTGATTGTTATCACTGCCAGATTTTCAACGTTCAATCGATTGTATCCCAAATCGCCTAAGTCCCGGTACCAAGTATCCTCGCTGTATTTTCATTTAACTAGCTAGGCTAATGCAAAACCAATGTTAACAATTAATTTAATGTC 64 15442409 0.985814981 23 59 493 0.94 1.672097858 0.43 0.34375 0.58 64 5 1 94 3R:15442277-15442427 8 45 1812 FBgn0038341 333.3333333 5.796666667 8.936666667 0.135 7.763082231 5.035434539 2 1 1.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 15493142 15493147 + 3R_15493142_15493147_+ 0.999357467 0.999932437 0.999644952 0.000406516 CG5205 FBtr0083147|FBtr0083147|FBtr0083147 15492984|15492984|15492984 15493310|15493310|15493310 3R + 15493130 15493161 3'utr CG5205 FlyBase G43108.1 GCGTATTTATTGTGTGATCCTCCAAGACATGT 11 15493141 0.915054294 4 9 103 0.857142857 0.602059991 0.142857143 0.181818182 0.357142857 11 0 2 12 3R:15493130-15493161 6 CG5205 FBtr0083147|FBtr0083147|FBtr0083147 15492984|15492984|15492984 15493310|15493310|15493310 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 15493121 15493159 3'utr CG5205 FlyBase G32566.1 ACTGAACTTGCGTATTTATTGTGTGATCCTCCAAGACAT 11 15493142 0.971903474 5 10 94 0.944444444 1.230448921 0.166666667 0.454545455 0.666666667 11 1 0 17 3R:15493121-15493159 6 10.5 1813 FBgn0038344 937.8966667 16.18666667 24.77666667 0.011195263 0.648682043 0.42378582 1 0 0.5 0.25 dme-miR-79-3p 7mer-A1 AGCTTTA 3R 15800876 15800882 + 3R_15800876_15800882_+ 0.422706593 0.459557955 0.441132274 0.026057875 nsl1 FBtr0309860|FBtr0301732|FBtr0309859 15798861|15798480|15798861 15801925|15801925|15801220 3R + 15800849 15800899 3'utr nsl1 FlyBase G43149.1 AGCCGTCGACACCAGATGTCGAGCATGAGCTTTACGACTCGGCGATCGATG 10 15800874 0.954359407 5 10 47 1 1.079181246 0.333333333 0.2 0.333333333 10 0 0 12 3R:15800849-15800899 7 nsl1 FBtr0309859|FBtr0309860|FBtr0301732 15798861|15798861|15798480 15801220|15801925|15801925 AGCTTTA 7mer-A1 dme-miR-79-3p 3R + 15800851 15800893 3'utr nsl1 FlyBase G32598.1 CCGTCGACACCAGATGTCGAGCATGAGCTTTACGACTCGGCGA 8 15800879 0.741676947 3 8 32 1 1 0.4 0.25 0.4 8 0 0 10 3R:15800851-15800893 7 7.5 1814 FBgn0262527 2734.32 54.57333333 83.61333333 0.002742912 0.137429758 0.089698613 2 -3 -0.5 0.25 dme-miR-14-3p 7mer-A1 AGACTGA 3R 15823606 15823612 + 3R_15823606_15823612_+ 0.813866302 0.819314911 0.816590606 0.003852742 alpha-Man-IIb FBtr0083179|FBtr0345238|FBtr0334593 15822936|15822936|15822936 15824118|15824118|15824118 3R + 15823585 15823628 3'utr alpha-Man-IIb FlyBase G43158.1 AGCGTTCGCATCGATTTGTTTAGACTGATTAGCCTAAAACGATT 68 15823604 0.730388281 8 68 633 1 1.86332286 0.150684932 0.073529412 0.136986301 68 0 0 73 3R:15823585-15823628 7 alpha-Man-IIb FBtr0334593|FBtr0345238|FBtr0083179 15822936|15822936|15822936 15824118|15824118|15824118 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 15823585 15823626 3'utr alpha-Man-IIb FlyBase G32605.1 AGCGTTCGCATCGATTTGTTTAGACTGATTAGCCTAAAACGA 43 15823604 0.707266663 6 42 397 0.986111111 1.851258349 0.236111111 0.372093023 0.625 43 1 0 71 3R:15823585-15823626 7 55.5 1815 FBgn0026616 98.7 2.216666667 3.413333333 0.56231003 25.03759398 16.25976563 2 2 2 0.25 dme-bantam-3p 7mer-m8 TGATCTC 3R 15844299 15844305 + 3R_15844299_15844305_+ 0.525835617 0.656219785 0.591027701 0.092195552 spn-E FBtr0083183 15844105 15844415 3R + 15844281 15844330 3'utr spn-E FlyBase G43165.1 TTTCTATGTTATGTTGAATGATCTCTCTTCGTTCAATTACGAAGTGTAAA 23 15844299 0.823496831 4 22 270 0.961538462 1.397940009 0.153846154 0.130434783 0.230769231 23 1 0 25 3R:15844281-15844330 7 spn-E FBtr0083183 15844105 15844415 TGATCTC 7mer-m8 dme-bantam-3p 3R + 15844286 15844332 3'utr spn-E FlyBase G32609.1 ATGTTATGTTGAATGATCTCTCTTCGTTCAATTACGAAGTGTAAAAT 21 15844298 0.747508333 6 19 227 0.964285714 1.130333768 0.178571429 0.333333333 0.5 21 0 1 27 3R:15844286-15844332 7 21.5 1816 FBgn0003483 512.23 13.13666667 20.07333333 0.041973332 1.636640447 1.071072733 0 1 0.5 0.25 dme-miR-304-5p 7mer-m8 TGAGATT 3R 15962371 15962377 - 3R_15962371_15962377_- 0.620022451 0.616989425 0.618505938 0.002144726 CG4287 FBtr0083240|FBtr0301716 15962165|15962165 15962537|15962537 3R - 15962350 15962394 3'utr CG4287 FlyBase G51636.1 AAATATGGGGACACCTATGAGATTTACAGATTTTAGTCAATTGCA 22 15962377 0.747213711 4 21 147 0.964285714 1.431363764 0.25 0.227272727 0.392857143 22 1 0 27 3R:15962350-15962394 7 CG4287 FBtr0083240|FBtr0301716 15962165|15962165 15962537|15962537 TGAGATT 7mer-m8 dme-miR-304-5p 3R - 15962349 15962390 3'utr CG4287 FlyBase G39008.1 ATGGGGACACCTATGAGATTTACAGATTTTAGTCAATTGCAA 9 15962377 0.812112578 4 9 59 1 1.176091259 0.4 0.333333333 0.6 9 0 0 15 3R:15962349-15962390 7 15.5 1817 FBgn0038388 224 16.66 25.57666667 0.069196429 0.930372149 0.606021113 0 0 0 0.25 dme-miR-276a-3p 6mer2-7 GTTCCT 3R 15983389 15983394 + 3R_15983389_15983394_+ 0.900402355 0.876388894 0.888395625 0.016980109 Hel89B FBtr0344471|FBtr0301715 15983324|15983324 15983451|15983451 3R + 15983359 15983431 3'utr Hel89B FlyBase G43231.1 AGGCTACGTTGATCATTTATATTGCCCTCTGTTCCTTTATAATCGCGAAAAGAAACTTTTAGAAATAAATATT 28 15983397 0.982343886 9 28 210 1 1.51851394 0.212121212 0.142857143 0.272727273 28 0 0 33 3R:15983359-15983431 6 Hel89B FBtr0344471|FBtr0301715 15983324|15983324 15983451|15983451 GTTCCT 6mer2-7 dme-miR-276a-3p 3R + 15983348 15983428 3'utr Hel89B FlyBase G32657.1 CTTCCAGTTTTAGGCTACGTTGATCATTTATATTGCCCTCTGTTCCTTTATAATCGCGAAAAGAAACTTTTAGAAATAAAT 25 15983398 0.914708736 10 22 204 0.914285714 1.204119983 0.342857143 0.32 0.514285714 25 2 1 32 3R:15983348-15983428 6 17 1818 FBgn0022787 1806.236667 33.54666667 51.41 0.009411834 0.506756757 0.330674966 -8 -9 -8.5 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 16003563 16003569 + 3R_16003563_16003569_+ 0.453769227 0.463047058 0.458408142 0.006560466 srp FBtr0335424 16003135 16004081 3R + 16003393 16003610 stop_codon srp FlyBase G43262.1 CAGCTGCAGCAGCAGACTGCCGCCCTCTTGGGTCAACATGAGCAGCATGTGACCAACTATGCGATGCATAAGTTCGGCGTTGACCGGGAAACAGTGGTGAAGATGGAGTAGGCGCGACACGCTGTATGTCGCACGACCAAAGATTCTGTTGTTACATTAATCTCATAGCTCCAAAGAATTTATAGCCTGTATACCAAGAGCAGTTCTCAAAGAACACT 531 16003549 0.855615541 36 497 3843 0.937791602 2.002166062 0.077760498 0.175141243 0.31881804 531 35 5 603 3R:16003393-16003610 7 srp FBtr0335424 16003135 16004081 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 16003379 16003671 stop_codon srp FlyBase G32683.2 AGCAGCAGCAGCAACAGCTGCAGCAGCAGACTGCCGCCCTCTTGGGTCAACATGAGCAGCATGTGACCAACTATGCGATGCATAAGTTCGGCGTTGACCGGGAAACAGTGGTGAAGATGGAGTAGGCGCGACACGCTGTATGTCGCACGACCAAAGATTCTGTTGTTACATTAATCTCATAGCTCCAAAGAATTTATAGCCTGTATACCAAGAGCAGTTCTCAAAGAACACTCATCTATCTAAAATCTATCGAATCATTAGTTGTACATACGGTCTAAATCGATTGATACTTA 337 16003549 0.9723129 41 313 2355 0.94 1.769007871 0.12 0.367952522 0.574 337 23 7 470 3R:16003379-16003671 7 262.5 1819 FBgn0003507 2528.6 69.84666667 106.7833333 0.103812386 3.758232318 2.45824879 14 14 14 0.25 dme-miR-92b-3p 7mer-m1 TGCAATT 3R 16003938 16003944 + 3R_16003938_16003944_+ 0.749669313 0.765586405 0.757627859 0.011255089 srp FBtr0335424 16003135 16004081 3R + 16003614 16003963 3'utr srp FlyBase G43262.2 CTATCTAAAATCTATCGAATCATTAGTTGTACATACGGTCTAAATCGATTGATACTTACATTTTCGTCGAATTTTAATGGTCCACTACTCGAAATTTGTTATGAAATACTAGTTTAATTGTTAGCAAAATGCCAACAGCATAAAATCGATTCAGAAACTAGGCTAAGAATGTTCATTTAAAATTTTGTTATCAAATCGAATACCTTTTGAGATTTCCTACAATCAAATTCCACTTAGATATTAGCCACAAATCATAGTTAAGTCAACCAAAAAAAGGCAAATGAAAACGAAAAAGAATAACAATCGAAGTAACCAATAATCTCATGCAATTAGCTATTAATTTATATATT 365 16003930 0.999999402 54 346 2252 0.966442953 2.033423755 0.089485459 0.175342466 0.326621924 365 12 3 432 3R:16003614-16003963 7 srp FBtr0335424 16003135 16004081 TGCAATT 7mer-m1 dme-miR-92b-3p 3R + 16003715 16003963 3'utr srp FlyBase G32683.4 TGAAATACTAGTTTAATTGTTAGCAAAATGCCAACAGCATAAAATCGATTCAGAAACTAGGCTAAGAATGTTCATTTAAAATTTTGTTATCAAATCGAATACCTTTTGAGATTTCCTACAATCAAATTCCACTTAGATATTAGCCACAAATCATAGTTAAGTCAACCAAAAAAAGGCAAATGAAAACGAAAAAGAATAACAATCGAAGTAACCAATAATCTCATGCAATTAGCTATTAATTTATATATT 285 16003938 0.975782655 30 275 1584 0.964370546 2.608526034 0.087885986 0.343859649 0.555819477 285 15 0 406 3R:16003715-16003963 7 216.5 1820 FBgn0003507 2528.6 69.84666667 106.7833333 0.085620501 3.099646845 2.027469955 8 0 4 0.25 dme-miR-278-3p 6mer3-8 CCCACC 3R 16040803 16040808 + 3R_16040803_16040808_+ 0.962870028 0.991584748 0.977227388 0.020304359 pnr FBtr0083220|FBtr0335426|FBtr0083221|FBtr0335427 16040311|16040311|16040311|16040311 16040915|16041796|16040915|16041796 3R + 16040776 16040917 3'utr pnr FlyBase G43285.1 AAATATTTTATGAGTATTCCGCACTTCCCCACCAACCCACTTAATAGAACATTTAGCAGTTAGTCCTATGTAGAAGTCTAGAATTAATATCGTAGCTCTGATCCATTTAATATGAACGCTAAATAAAGATTGTATTAAACTA 63 16040800 0.815148863 20 59 420 0.93902439 1.187520721 0.036585366 0.238095238 0.414634146 63 1 4 77 3R:16040776-16040917 6 pnr FBtr0083221|FBtr0335427|FBtr0083220|FBtr0335426 16040311|16040311|16040311|16040311 16040915|16041796|16040915|16041796 CCCACC 6mer3-8 dme-miR-278-3p 3R + 16040780 16040916 3'utr pnr FlyBase G32705.1 ATTTTATGAGTATTCCGCACTTCCCCACCAACCCACTTAATAGAACATTTAGCAGTTAGTCCTATGTAGAAGTCTAGAATTAATATCGTAGCTCTGATCCATTTAATATGAACGCTAAATAAAGATTGTATTAAACT 58 16040800 0.772440948 24 51 373 0.870588235 1.86923172 0.094117647 0.344827586 0.552941176 58 11 0 74 3R:16040780-16040916 6 17.5 1821 FBgn0003117 3353.65 145.2033333 222.1433333 0.005218195 0.120520649 0.078777966 3 3 3 0.25 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 16046449 16046456 - 3R_16046449_16046456_- 0.570912869 0.546088635 0.558500752 0.017553431 ird5 FBtr0304804 16046345 16046579 3R - 16046408 16046484 3'utr ird5 FlyBase G51670.1 TTTGTTATTGCCCGCTTATCCAATTAATTAGCTTTATTAGTTTCATAGAATCTTTAATGTTCTCATTTGGAAACGTT 228 16046457 0.836164252 14 219 2868 0.964143426 2.383815366 0.067729084 0.087719298 0.171314741 228 9 0 242 3R:16046408-16046484 8 ird5 FBtr0304804 16046345 16046579 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R - 16046410 16046471 3'utr ird5 FlyBase G39032.1 GCTTATCCAATTAATTAGCTTTATTAGTTTCATAGAATCTTTAATGTTCTCATTTGGAAACG 141 16046457 0.8355184 10 136 1738 0.954545455 2.276461804 0.060606061 0.290780142 0.494949495 141 9 0 189 3R:16046410-16046471 8 164 1822 FBgn0024222 780.2833333 38.32666667 59.02333333 0.210180063 4.279005044 2.778562151 1 1 1 0.25 dme-miR-1008-3p 6mer2-7 GCTGTG 3R 16103826 16103831 + 3R_16103826_16103831_+ 0.503084718 0.505104125 0.504094421 0.001427931 Akt1 FBtr0344717|FBtr0083228|FBtr0083226|FBtr0344470|FBtr0083227 16103113|16103113|16103113|16103113|16103113 16105670|16104515|16104515|16104515|16104515 3R + 16103792 16103846 3'utr Akt1 FlyBase G43344.1 AAGTTATATATAATGTTAAAATTGCCTCTAATGTGCTGTGCTTTATGCAAAACTA 23 16103823 0.988760011 5 23 222 1 1.414973348 0.076923077 0.130434783 0.230769231 23 0 0 26 3R:16103792-16103846 6 Akt1 FBtr0083227|FBtr0344717|FBtr0083228|FBtr0083226|FBtr0344470 16103113|16103113|16103113|16103113|16103113 16104515|16105670|16104515|16104515|16104515 GCTGTG 6mer2-7 dme-miR-1008-3p 3R + 16103810 16103846 3'utr Akt1 FlyBase G32753.1 AAATTGCCTCTAATGTGCTGTGCTTTATGCAAAACTA 18 16103823 0.770886143 4 15 151 0.807692308 1.021189299 0.115384615 0.444444444 0.615384615 18 4 1 21 3R:16103810-16103846 6 19 1823 FBgn0010379 3175.29 102.15 156.83 0.005983705 0.186000979 0.12115029 3 3 3 0.25 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 16149241 16149247 + 3R_16149241_16149247_+ 0.65136601 0.656786461 0.654076236 0.003832872 CG5916 FBtr0083251|FBtr0344009 16148765|16148765 16149389|16149636 3R + 16149221 16149273 3'utr CG5916 FlyBase G43359.1 TTACCCAACAACAAACATTTTGTGTTCTAAGTTATCTTGTTGATCAAAGAAGT 17 16149240 0.707334732 4 17 149 1 1.342422681 0.136363636 0.176470588 0.363636364 17 0 0 22 3R:16149221-16149273 7 CG5916 FBtr0083251|FBtr0344009 16148765|16148765 16149389|16149636 TGTGTTC 7mer-m8 dme-miR-317-3p 3R + 16149222 16149282 3'utr CG5916 FlyBase G32761.1 TACCCAACAACAAACATTTTGTGTTCTAAGTTATCTTGTTGATCAAAGAAGTATTTATTTT 17 16149240 0.98841743 6 16 152 0.96 1.380211242 0.48 0.352941176 0.56 17 1 0 24 3R:16149222-16149282 7 13.5 1824 FBgn0038401 127.6666667 7.303333333 11.36 0.105744125 1.848471018 1.188380282 1 1 1 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3R 16197053 16197059 + 3R_16197053_16197059_+ 0.519573496 0.435013538 0.477293517 0.059792949 sra FBtr0344473|FBtr0083255 16196914|16196914 16197584|16197584 3R + 16196927 16197076 3'utr sra FlyBase G43368.1 TGACGAAACTAAAGCTGAAAACCTGAGTTGTAAAACCAAACGATCGGGACAACGGGTTGGGACTCATGCTCTGCGGATGGTTGGGGCTTCGATTGAGTATTTTTTGTAAATATTTTCCGATTCAATTGTGATTAATTTACACATACATAT 91 16197052 0.822085075 21 87 770 0.964285714 1.431363764 0.026785714 0.208791209 0.357142857 91 1 3 108 3R:16196927-16197076 7 sra FBtr0344473|FBtr0083255 16196914|16196914 16197584|16197584 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 16196927 16197073 3'utr sra FlyBase G32768.1 TGACGAAACTAAAGCTGAAAACCTGAGTTGTAAAACCAAACGATCGGGACAACGGGTTGGGACTCATGCTCTGCGGATGGTTGGGGCTTCGATTGAGTATTTTTTGTAAATATTTTCCGATTCAATTGTGATTAATTTACACATACA 48 16197052 0.987946693 15 47 421 0.971428571 1.832508913 0.028571429 0.375 0.571428571 48 2 0 68 3R:16196927-16197073 7 54 1825 FBgn0086370 863.5966667 56.39333333 86.18 0.06252919 0.957559995 0.626595498 1 1 1 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 16197550 16197555 + 3R_16197550_16197555_+ 0.952209738 0.990509825 0.971359781 0.02708226 sra FBtr0344473|FBtr0083255 16196914|16196914 16197584|16197584 3R + 16197520 16197566 3'utr sra FlyBase G43370.1 TTCAAATTCGAAATGAATGTTCTCAAATGTACCAAACAAAACAAAAT 26 16197537 0.967535914 3 25 142 1 1.51851394 0.363636364 0.24 0.424242424 25 0 0 33 3R:16197520-16197566 6 sra FBtr0344473|FBtr0083255 16196914|16196914 16197584|16197584 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 16197483 16197567 3'utr sra FlyBase G32770.1 ATGCCTACGTGTAGTTAAAATTTAAATTGAAAATATATTCAAATTCGAAATGAATGTTCTCAAATGTACCAAACAAAACAAAATG 23 16197537 0.968053673 7 22 129 1 1.544068044 0.428571429 0.454545455 0.657142857 22 0 0 35 3R:16197483-16197567 6 12 1826 FBgn0086370 863.5966667 56.39333333 86.18 0.013895376 0.21279111 0.139243444 13 13 13 0.25 dme-miR-1003-3p 7mer-m8 ATGTGAG 3R 16261385 16261391 - 3R_16261385_16261391_- 0.671796179 0.671426085 0.671611132 0.0002617 bor FBtr0305998|FBtr0083276 16261353|16261353 16261833|16261833 3R - 16261380 16261442 3'utr bor FlyBase G51707.1 AACTTCTCGCTGGCTCTTCCACCAATTTCACTTGTCCGCAGTGTTTCCTATATGTGAGTATGA 9 16261392 0.991699553 7 8 82 0.8125 1.113943352 0 0.333333333 0.625 9 3 0 13 3R:16261380-16261442 7 bor FBtr0305998|FBtr0083276 16261353|16261353 16261833|16261833 ATGTGAG 7mer-m8 dme-miR-1003-3p 3R - 16261376 16261413 3'utr bor FlyBase G39057.1 ACTTGTCCGCAGTGTTTCCTATATGTGAGTATGAAGTA 7 16261394 0.63094883 5 6 58 1 0.954242509 0.333333333 0.285714286 0.444444444 7 0 0 9 3R:16261376-16261413 7 6 1827 FBgn0040237 972.07 49.02666667 75.33333333 0.006172395 0.122382377 0.079646018 1 3 2 0.25 dme-bantam-3p 6mer3-8 TGATCT 3R 16266854 16266859 + 3R_16266854_16266859_+ 0.892622561 0.677008475 0.784815518 0.152462192 asun FBtr0083259 16266545 16266891 3R + 16266834 16266866 3'utr asun FlyBase G43394.1 TTTTTTTTAACTTGTGATTGTGATCTTTGGCAC 9 16266852 0.653972491 3 7 100 0.8 0.602059991 0.3 0.111111111 0.2 9 1 1 8 3R:16266834-16266866 6 asun FBtr0083259 16266545 16266891 TGATCT 6mer3-8 dme-bantam-3p 3R + 16266838 16266870 3'utr asun FlyBase G32785.1 TTTTAACTTGTGATTGTGATCTTTGGCACGGTA 6 16266853 0.67946575 4 6 59 1 0.903089987 0.25 0.333333333 0.5 6 0 0 8 3R:16266838-16266870 6 7.5 1828 FBgn0020407 250 12.17666667 18.69333333 0.03 0.615932111 0.401212553 2 1 1.5 0.25 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 16303469 16303475 + 3R_16303469_16303475_+ 0.65041267 0.632575582 0.641494126 0.012612734 gish FBtr0334606 16301873 16304768 3R + 16303447 16303492 3'utr gish FlyBase G43416.1 AGATATACAGTATGAATCAATAGGCAGCTTGGTTTAGCTCTGTTTT 20 16303467 0.936824512 2 19 151 0.961538462 1.397940009 0.076923077 0.25 0.423076923 20 1 0 25 3R:16303447-16303492 7 gish FBtr0334606 16301873 16304768 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 16303455 16303490 3'utr gish FlyBase G32809.1 AGTATGAATCAATAGGCAGCTTGGTTTAGCTCTGTT 19 16303467 0.930434057 2 19 123 1 1.361727836 0.043478261 0.157894737 0.304347826 19 0 0 23 3R:16303455-16303490 7 19.5 1829 FBgn0250823 3945.283333 157.2966667 241.69 0.004942611 0.123969569 0.080681865 2 2 2 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 16311128 16311133 - 3R_16311128_16311133_- 0.975842795 0.959054009 0.967448402 0.011871474 Sulf1 FBtr0334699|FBtr0083273|FBtr0334700 16310540|16310540|16310540 16311180|16311180|16311180 3R - 16311047 16311155 3'utr Sulf1 FlyBase G51728.1 ACATATCCAATGCGTATCCTTTGTACCTTGCTTGCCCGCTTCTAATCTTTGGTTTGCCCCATTTAATGTTTTCATACATAAATAAGACTGTGTTTTAATCTATATTCGT 126 16311134 0.688923571 17 117 1143 0.939189189 2.1430148 0.27027027 0.134920635 0.263513514 126 9 0 139 3R:16311047-16311155 6 Sulf1 FBtr0334700|FBtr0083273|FBtr0334699 16310540|16310540|16310540 16311180|16311180|16311180 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 16311105 16311152 3'utr Sulf1 FlyBase G39073.1 TATCCAATGCGTATCCTTTGTACCTTGCTTGCCCGCTTCTAATCTTTG 30 16311134 0.659523187 7 28 303 0.936170213 1.643452676 0.574468085 0.466666667 0.659574468 30 3 0 44 3R:16311105-16311152 6 45.5 1830 FBgn0040271 314.1 7.876666667 12.08 0.144858325 5.776555226 3.766556291 1 1 1 0.25 dme-miR-317-5p 6mer3-8 GTATCC 3R 16345443 16345448 + 3R_16345443_16345448_+ 0.960019105 0.98895835 0.974488727 0.020463105 pad FBtr0301514 16345403 16345829 3R + 16345407 16345551 3'utr pad FlyBase G43431.1 AGTCCTTAAGCTCGAAAAGTGAATCCACCTTACCTCGTATCCTAGTCCGCGGTCTATTCCAACATCTGGTCGCCAGTTCCTTGTATTGTATAGTTTTCGGTAAATTTTCCTTTTAATTTTCTTTGTGCAATATTATTTATAGCAA 66 16345446 0.844306844 20 61 588 0.906666667 1.531478917 0.066666667 0.136363636 0.24 66 6 1 68 3R:16345407-16345551 6 pad FBtr0301514 16345403 16345829 GTATCC 6mer3-8 dme-miR-317-5p 3R + 16345398 16345464 stop_codon pad FlyBase G32816.1 AAAGTAATTAGTCCTTAAGCTCGAAAAGTGAATCCACCTTACCTCGTATCCTAGTCCGCGGTCTATT 27 16345445 0.986547304 9 24 177 0.861111111 1.491361694 0.027777778 0.259259259 0.444444444 27 5 0 31 3R:16345398-16345464 6 25.5 1831 FBgn0038418 118 4.38 6.753333333 0.216101695 5.821917808 3.775913129 -3 -2 -2.5 0.25 dme-miR-1006-3p 8mer-A1 CGAATTTA 3R 16350969 16350976 - 3R_16350969_16350976_- 0.650944384 0.527762537 0.589353461 0.087102757 CG10311 FBtr0083324|FBtr0345202 16350904|16350784 16351129|16351129 3R - 16350916 16351061 3'utr CG10311 FlyBase G51743.1 TCCTAGCTTCCTATGTTCGTTTTTAGTGATTATGTCTAACTAATAATTATAATTTAGTTGAGGCGAGCCAGCCCTTCGCTCACATCGAATTTACGCGGCCCGTGGCATTAAGTGCAATGGAATTATGTATTTAACATTTAAATAAA 17 16350977 0.986917487 9 14 128 0.888888889 1.204119983 0 0.058823529 0.111111111 17 2 0 16 3R:16350916-16351061 8 CG10311 FBtr0345202|FBtr0083324 16350784|16350904 16351129|16351129 CGAATTTA 8mer-A1 dme-miR-1006-3p 3R - 16350926 16351004 3'utr CG10311 FlyBase G39084.1 TTGAGGCGAGCCAGCCCTTCGCTCACATCGAATTTACGCGGCCCGTGGCATTAAGTGCAATGGAATTATGTATTTAACA 19 16350977 0.971104192 9 16 95 0.793103448 1.361727836 0.310344828 0.421052632 0.620689655 19 6 0 23 3R:16350926-16351004 8 8.5 1832 FBgn0038420 2 0.253333333 0.403333333 4.25 33.55263158 21.07438017 1 1 1 0.25 dme-miR-252-5p 7mer-m8 GTACTTA 3R 16434643 16434649 + 3R_16434643_16434649_+ 0.552789035 0.46190805 0.507348543 0.064262501 CG17565 FBtr0083286 16434515 16434740 3R + 16434624 16434668 3'utr CG17565 FlyBase G43447.1 TTTCGCTTCTTGTATAAATGTACTTATTGGAAAAGGAATTGATTA 14 16434642 0.987908723 4 14 131 1 1.204119983 0.1875 0.071428571 0.1875 14 0 0 16 3R:16434624-16434668 7 CG17565 FBtr0083286 16434515 16434740 GTACTTA 7mer-m8 dme-miR-252-5p 3R + 16434616 16434661 3'utr CG17565 FlyBase G32828.1 ATTGTATTTTTCGCTTCTTGTATAAATGTACTTATTGGAAAAGGAA 17 16434642 0.986627752 3 16 140 0.954545455 1.322219295 0.227272727 0.235294118 0.409090909 17 1 0 21 3R:16434616-16434661 7 15.5 1833 FBgn0038424 261 20.12666667 30.60666667 0.059386973 0.770122557 0.506425615 1 1 1 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 16457729 16457736 + 3R_16457729_16457736_+ 0.601901231 0.619918085 0.610909658 0.012739872 CG14883 FBtr0083291 16457662 16458233 3R + 16457716 16457917 3'utr CG14883 FlyBase G43455.1 TACACAAACTGTTTGCATTTAGCTGGCAGAGCTTAGCCCTTAAGACAAACTTAAGTACGCATGTGTTTTTGTAGAAGCTTTAGAAAGTATTATCCCAAGCTTACCGGTACCAGTGAAATGGAAGATATAATTTAGATAGTTTATGTGCTTTACTTTTGTTTACCTGAAGCTTTTATTCATTTTATTGACGTCCTAATTTATT 210 16457728 0.876746571 28 204 1817 0.971428571 2.376576957 0.155102041 0.142857143 0.265306122 210 7 0 238 3R:16457716-16457917 8 CG14883 FBtr0083291 16457662 16458233 TGCATTTA 8mer-A1 dme-miR-277-3p 3R + 16457653 16457756 stop_codon CG14883 FlyBase G32834.1 TGAAAGCCTAAGAGTCCTTCAGGATTTGAACGAACGATAACGACTTAGATCGACGCACACACATACACAAACTGTTTGCATTTAGCTGGCAGAGCTTAGCCCTT 53 16457728 0.984126712 11 50 389 0.935064935 1.556302501 0.220779221 0.320754717 0.532467532 53 4 1 72 3R:16457653-16457756 8 51 1834 FBgn0038432 123 8.256666667 12.72666667 0.414634146 6.176826807 4.007333683 1 1 1 0.25 dme-miR-980-5p 7mer-m1 AAAAACT 3R 16458393 16458399 - 3R_16458393_16458399_- 0.708533652 0.591012573 0.649773112 0.083099967 CG42232 FBtr0290134 16458278 16458598 3R - 16458373 16458505 3'utr CG42232 FlyBase G51802.1 ATTTATGTATCAATTAATGAAGGCGTGTTATTTTTTAATTTCTCTTGTTAATCCAACCCATTTCGGTGGGATACCGTTGAATGGAATGGCTCCCCTCGCTCAGAACAAAAACTAACCTTAATAGATTTAAGGC 36 16458392 0.971108051 16 34 228 0.947368421 1.255272505 0.105263158 0.055555556 0.105263158 36 1 1 36 3R:16458373-16458505 7 CG42232 FBtr0290134 16458278 16458598 AAAAACT 7mer-m1 dme-miR-980-5p 3R - 16458363 16458428 3'utr CG42232 FlyBase G39127.1 TGAATGGAATGGCTCCCCTCGCTCAGAACAAAAACTAACCTTAATAGATTTAAGGCATTTAAAAAT 20 16458420 0.960929876 11 19 95 0.966666667 1.462397998 0.333333333 0.45 0.633333333 20 1 0 29 3R:16458363-16458428 7 16 1835 FBgn0250754 5895.886667 65.18333333 100.1066667 0.002713756 0.245461519 0.159829515 -7 21 7 0.25 dme-bantam-3p 8mer-A1 TGATCTCA 3R 16642258 16642265 + 3R_16642258_16642265_+ 0.608288204 0.619731545 0.614009874 0.008091635 nonA-l FBtr0333727|FBtr0083335 16642219|16642219 16643112|16642773 3R + 16642183 16642323 stop_codon nonA-l FlyBase G43468.1 ACGGACACATTGATTCATGGGGACACCGACGCTTCTAGACACTGAAACCTATATAGATAGCGACGAAAACAATAGTGATCTCATTAGTTACGCATAATATCGGACATTTCGCTCGGCTATGCGTGAACAATAACATAAATA 632 16642255 0.928516887 20 623 4300 0.987359551 2.545925329 0.130617978 0.109177215 0.209269663 632 8 1 703 3R:16642183-16642323 8 nonA-l FBtr0333727|FBtr0083335 16642219|16642219 16643112|16642773 TGATCTCA 8mer-A1 dme-bantam-3p 3R + 16642125 16642324 stop_codon nonA-l FlyBase G32850.1 AGCAACAATTCAACAATGGCTGGACCTGGAGGTCCAGATAATAGCGACGGAAACCAACACGGACACATTGATTCATGGGGACACCGACGCTTCTAGACACTGAAACCTATATAGATAGCGACGAAAACAATAGTGATCTCATTAGTTACGCATAATATCGGACATTTCGCTCGGCTATGCGTGAACAATAACATAAATAA 350 16642256 0.97857187 21 336 2267 0.960227273 1.75076545 0.164772727 0.388571429 0.59469697 350 13 8 507 3R:16642125-16642324 8 469.5 1836 FBgn0015520 285.6666667 13.51 20.79666667 1.643523921 34.75203553 22.57573329 3 2 2.5 0.25 dme-miR-31a-5p 7mer-A1 CTTGCCA 3R 16644817 16644823 + 3R_16644817_16644823_+ 0.335761916 0.652983859 0.494372887 0.224309827 CG10326 FBtr0083336|FBtr0333728 16644750|16644750 16645171|16645171 3R + 16644768 16644882 3'utr CG10326 FlyBase G43474.1 AAACTCATCACCATTTGACCAAAAATATAAAACATGCCTAAGTCATCTACTTGCCATTATGCACACATCGCATCACTAAATCACACATTAGGCGCATTGAATTTGAAACTATAAA 19 16644815 0.758719376 13 16 106 0.875 1.021189299 0.291666667 0.210526316 0.375 19 2 1 21 3R:16644768-16644882 7 CG10326 FBtr0333728|FBtr0083336 16644750|16644750 16645171|16645171 CTTGCCA 7mer-A1 dme-miR-31a-5p 3R + 16644750 16644840 stop_codon CG10326 FlyBase G32854.1 AAAGGAAAGCAACCAGATAAACTCATCACCATTTGACCAAAAATATAAAACATGCCTAAGTCATCTACTTGCCATTATGCACACATCGCAT 11 16644816 0.991697811 7 8 78 0.777777778 1.146128036 0.055555556 0.545454545 0.722222222 11 4 0 14 3R:16644750-16644840 7 6.5 1837 FBgn0038453 605.7533333 63.22 96.46 0.01073044 0.102815565 0.067385445 2 1 1.5 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3R 16645060 16645066 + 3R_16645060_16645066_+ 0.519946317 0.516792416 0.518369366 0.002230144 CG10326 FBtr0083336|FBtr0333728 16644750|16644750 16645171|16645171 3R + 16644930 16645149 3'utr CG10326 FlyBase G43475.1 AACTAGCAAATCCGTGGTTCTGGCCCCATCACATCTCCTACTATAAGTTTGTAACATGTAAGACAGAAGTATTCTCGAAACGAGGCGTACGGAGAGAGAAAAAAACGCGCAACAAAAGACAAGGCATTTTTGTGATTATTTTGTGAGTTAATTGAAATTTATGATAATCCCAAGTAAGATAAAAAAAGGAACTTAAGCGTCTAATGAACTATATTTAAAT 229 16645059 0.989504324 28 216 2102 0.952702703 2.149219113 0.097972973 0.227074236 0.402027027 229 13 1 282 3R:16644930-16645149 7 CG10326 FBtr0333728|FBtr0083336 16644750|16644750 16645171|16645171 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 16644978 16645135 3'utr CG10326 FlyBase G32855.1 TTGTAACATGTAAGACAGAAGTATTCTCGAAACGAGGCGTACGGAGAGAGAAAAAAACGCGCAACAAAAGACAAGGCATTTTTGTGATTATTTTGTGAGTTAATTGAAATTTATGATAATCCCAAGTAAGATAAAAAAAGGAACTTAAGCGTCTAATG 134 16645059 0.989444456 17 124 1189 0.93442623 1.755874856 0.202185792 0.305970149 0.491803279 134 10 2 171 3R:16644978-16645135 7 146 1838 FBgn0038453 605.7533333 63.22 96.46 0.241022198 2.309395761 1.513580759 1 1 1 0.25 dme-miR-277-3p 6mer3-8 TGCATT 3R 16994135 16994140 + 3R_16994135_16994140_+ 0.704788017 0.983179312 0.843983664 0.196852376 CG31274 FBtr0083369 16994096 16994532 3R + 16994101 16994219 3'utr CG31274 FlyBase G43495.1 AATATGCCGAAGGAGGGAGGGGTATTCCACTGATTGCATTCTGTCCCATTGTTGGACTATTTTTAACCGTCCGCTGGATTATCAGCGCTGCCCTCGCTGCCCTGCAGTCGTCGATTGCA 32 16994134 0.98470536 15 31 249 0.970588235 1.51851394 0.264705882 0.0625 0.117647059 32 1 0 33 3R:16994101-16994219 6 CG31274 FBtr0083369 16994096 16994532 TGCATT 6mer3-8 dme-miR-277-3p 3R + 16994101 16994159 3'utr CG31274 FlyBase G32875.1 AATATGCCGAAGGAGGGAGGGGTATTCCACTGATTGCATTCTGTCCCATTGTTGGACTA 18 16994134 0.984050713 7 17 131 1 1.397940009 0.2 0.388888889 0.56 18 0 0 25 3R:16994101-16994159 6 18 1839 FBgn0051274 0 0 0 Inf Inf Inf 1 1 1 0.25 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 16999384 16999391 + 3R_16999384_16999391_+ 0.379371778 0.363078734 0.371225256 0.011520961 CG3534 FBtr0083370 16999271 16999449 3R + 16999295 16999421 3'utr CG3534 FlyBase G43509.1 CATTCCAGTTTATACTCCGTACATTCACAAACTGATTCCTTCTTAAACGTCTCCTGTAATTGACAGAACTTAAGTGCAATTAACAAATTCTGTGATTGACGATTTATTACAAATTTATGCGAAACCA 89 16999383 0.982934586 17 84 636 0.92920354 1.322219295 0.309734513 0.179775281 0.353982301 89 4 4 105 3R:16999295-16999421 8 CG3534 FBtr0083370 16999271 16999449 CTGTGATT 8mer-m1 dme-miR-308-3p 3R + 16999317 16999409 3'utr CG3534 FlyBase G32883.1 ATTCACAAACTGATTCCTTCTTAAACGTCTCCTGTAATTGACAGAACTTAAGTGCAATTAACAAATTCTGTGATTGACGATTTATTACAAATT 59 16999383 0.761703922 13 56 393 0.957746479 1.832508913 0.225352113 0.169491525 0.309859155 59 3 0 68 3R:16999317-16999409 8 54 1840 FBgn0038463 327.35 20.21 30.99 0.164961051 2.671944582 1.74249758 1 1 1 0.25 dme-miR-92b-3p 7mer-A1 TGCAATA 3R 17087931 17087937 + 3R_17087931_17087937_+ 0.466064995 0.723780709 0.594922852 0.182232519 GckIII FBtr0083399 17087725 17087988 3R + 17087902 17087951 3'utr GckIII FlyBase G43566.1 AGCATATAATATGTATTCGTTTGTTTATCTGCAATATTAATCTAATGTAA 16 17087929 0.990468693 3 16 189 1 1.230448921 0.058823529 0.0625 0.117647059 16 0 0 17 3R:17087902-17087951 7 GckIII FBtr0083399 17087725 17087988 TGCAATA 7mer-A1 dme-miR-92b-3p 3R + 17087920 17087948 3'utr GckIII FlyBase G32932.1 GTTTGTTTATCTGCAATATTAATCTAATG 5 17087929 0.759707324 2 5 50 1 0.84509804 0.428571429 0.4 0.571428571 5 0 0 7 3R:17087920-17087948 7 10 1841 FBgn0266465 620.1 30.44666667 46.71666667 0.016126431 0.328443179 0.214056368 2 2 2 0.25 dme-bantam-3p 6mer3-8 TGATCT 3R 17389770 17389775 + 3R_17389770_17389775_+ 0.944109525 0.555067265 0.749588395 0.275094378 lute FBtr0306209|FBtr0306210|FBtr0083435|FBtr0330037 17388979|17388979|17388979|17389153 17390265|17390265|17390265|17390265 3R + 17389759 17389789 3'utr lute FlyBase G43607.1 ATACACACATCTGATCTGATAATGATAAACT 6 17389769 0.854373975 3 5 37 0.857142857 0.77815125 0.142857143 0.166666667 0.285714286 6 1 0 6 3R:17389759-17389789 6 lute FBtr0306209|FBtr0306210|FBtr0083435|FBtr0330037 17388979|17388979|17388979|17389153 17390265|17390265|17390265|17390265 TGATCT 6mer3-8 dme-bantam-3p 3R + 17389723 17389801 3'utr lute FlyBase G32960.1 ATACCAAACATATTTTTGCCAGCATATACCTAACATATACACACATCTGATCTGATAATGATAAACTATAGTCCTAAAC 9 17389769 0.984205745 7 8 63 0.9 0.653212514 0.3 0.111111111 0.2 9 0 1 9 3R:17389723-17389801 6 6.5 1842 FBgn0262871 490.37 16.86 25.93333333 0.013255297 0.385527877 0.250642674 1 1 1 0.25 dme-miR-980-5p 6mer3-8 GAAAAA 3R 17396625 17396630 - 3R_17396625_17396630_- 0.763022195 0.754693349 0.758857772 0.005889422 Sur-8 FBtr0083447|FBtr0339531|FBtr0083448 17395197|17395197|17395197 17397335|17397176|17397335 3R - 17396627 17396659 3'utr Sur-8 FlyBase G51989.1 AAAAAAACGCAAGCGCCAAGGAATTGTTTGAAA 18 17396633 0.97268292 4 12 70 0.666666667 1.146128036 0.142857143 0.166666667 0.285714286 18 7 0 14 3R:17396627-17396659 3 Sur-8 FBtr0083448|FBtr0339531|FBtr0083447 17395197|17395197|17395197 17397335|17397176|17397335 GAAAAA 6mer3-8 dme-miR-980-5p 3R - 17396576 17396654 3'utr Sur-8 FlyBase G39255.1 AACGCAAGCGCCAAGGAATTGTTTGAAAAAATTTAAAACTAAAAACAAAAAGTGGTTAAGAAATTATTAATCTGTATAC 14 17396632 0.951801818 6 13 57 0.888888889 1.204119983 0.111111111 0.214285714 0.388888889 14 2 0 16 3R:17396576-17396654 6 13.5 1843 FBgn0038504 2699.363333 76.09666667 116.9633333 0.005001179 0.177405931 0.115420787 3 2 2.5 0.25 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 17396895 17396902 - 3R_17396895_17396902_- 0.487693741 0.50351586 0.495604801 0.011187985 Sur-8 FBtr0083447|FBtr0339531|FBtr0083448|FBtr0339532 17395197|17395197|17395197|17396664 17397335|17397176|17397335|17397335 3R - 17396824 17396999 3'utr Sur-8 FlyBase G51991.1 TGATATCAGCTACTTTCCCCAAAGCGATTCTAATTGCTTAACCTTCTACTTAGGCTTACTCCCTTAAACCGACTGGAGTGCGTTGGCTGACAAACGATAGCTTTAAAACGTTATACCAATGTCCCGCGTATTGTAAACTGCCCCGATTTGCTTTTTATTCTTTCTGTGTTCAATCA 82 17396902 0.939516592 26 80 537 0.988636364 1.638489257 0.284090909 0.048780488 0.113636364 82 0 1 87 3R:17396824-17396999 8 Sur-8 FBtr0339532|FBtr0083448|FBtr0339531|FBtr0083447 17396664|17395197|17395197|17395197 17397335|17397335|17397176|17397335 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R - 17396837 17396949 3'utr Sur-8 FlyBase G39257.1 TAGGCTTACTCCCTTAAACCGACTGGAGTGCGTTGGCTGACAAACGATAGCTTTAAAACGTTATACCAATGTCCCGCGTATTGTAAACTGCCCCGATTTGCTTTTTATTCTTT 68 17396902 0.926844242 18 63 395 0.947916667 1.260071388 0.427083333 0.352941176 0.541666667 68 1 4 91 3R:17396837-17396949 8 46.5 1844 FBgn0038504 2699.363333 76.09666667 116.9633333 0.017226284 0.611064874 0.397560489 0 0 0 0.25 dme-miR-1007-3p 6mer3-8 TGAGCT 3R 17532337 17532342 - 3R_17532337_17532342_- 0.989858795 0.885954054 0.937906424 0.073471718 CG5823 FBtr0083505|FBtr0321266 17532323|17532323 17532719|17532719 3R - 17532321 17532357 3'utr CG5823 FlyBase G52005.1 AAGCCCGGCAACATATGAGCTCGTGTACAAATTAACC 11 17532342 0.948921814 4 10 49 0.933333333 1.146128036 0.2 0.272727273 0.466666667 11 1 0 14 3R:17532321-17532357 6 CG5823 FBtr0083505|FBtr0321266 17532323|17532323 17532719|17532719 TGAGCT 6mer3-8 dme-miR-1007-3p 3R - 17532320 17532403 3'utr CG5823 FlyBase G39270.1 AATGCAACGTGAATAATGCCAGAAATATGTTTGTAAATGAATAAAGAAGCCCGGCAACATATGAGCTCGTGTACAAATTAACCA 24 17532342 0.88281547 5 22 95 0.864864865 1.505149978 0.189189189 0.291666667 0.540540541 24 5 0 32 3R:17532320-17532403 6 12 1845 FBgn0038515 447.3266667 29.51666667 45.11666667 0.026826033 0.406549972 0.265977096 0 0 0 0.25 dme-miR-980-3p 6mer3-8 GGCAGC 3R 17544575 17544580 + 3R_17544575_17544580_+ 0.988724607 0.805221217 0.896972912 0.129756499 SF1 FBtr0331707 17543545 17545148 3R + 17544534 17544594 3'utr SF1 FlyBase G43627.1 ATGGAGCACGGTATGGGATTGGACCAGCACGGTCACGGTTTGGCAGCGATGGATCACGGCA 11 17544574 0.95117855 4 10 44 1 1.079181246 0.333333333 0.090909091 0.166666667 11 0 0 12 3R:17544534-17544594 6 SF1 FBtr0331707 17543545 17545148 GGCAGC 6mer3-8 dme-miR-980-3p 3R + 17544551 17544607 3'utr SF1 FlyBase G32974.1 ATTGGACCAGCACGGTCACGGTTTGGCAGCGATGGATCACGGCATGAGCCTTGGCAT 7 17544574 0.956565382 3 7 33 1 1.041392685 0.181818182 0.428571429 0.636363636 7 0 0 11 3R:17544551-17544607 6 6.5 1846 FBgn0025571 727 34.72 53.27 0.008940853 0.187211982 0.122019899 1 1 1 0.25 dme-miR-1003-3p 7mer-A1 TGTGAGA 3R 17544997 17545003 + 3R_17544997_17545003_+ 0.261339469 0.309059925 0.285199697 0.033743418 SF1 FBtr0083456|FBtr0331707 17544931|17543545 17545148|17545148 3R + 17544958 17545020 3'utr SF1 FlyBase G43629.1 CTGAGAACACTCAGCTGCTCCAACGATAGTGCTCGACCCTGTGAGACTGTCCCTGCAATCAAT 109 17544999 0.782007554 8 108 575 0.992366412 2.113943352 0.229007634 0.174311927 0.312977099 109 1 0 130 3R:17544958-17545020 7 SF1 FBtr0331707 17543545 17545148 TGTGAGA 7mer-A1 dme-miR-1003-3p 3R + 17544926 17545018 3'utr SF1 FlyBase G32975.1 CGCTTGAGCTTTTGGACTTCATAAGATCGATCCTGAGAACACTCAGCTGCTCCAACGATAGTGCTCGACCCTGTGAGACTGTCCCTGCAATCA 92 17544999 0.804673074 12 85 528 0.948148148 1.630088715 0.333333333 0.380434783 0.577777778 92 5 2 128 3R:17544926-17545018 7 90 1847 FBgn0025571 727 34.72 53.27 0.123796424 2.592165899 1.689506289 -2 -2 -2 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 17674291 17674298 - 3R_17674291_17674298_- 0.525912612 0.560289256 0.543100934 0.024307998 alt FBtr0089412|FBtr0089413|FBtr0335026|FBtr0089415|FBtr0089414|FBtr0089417|FBtr0335027|FBtr0089416 17674184|17674184|17673730|17674184|17674184|17674184|17673730|17674184 17674823|17674823|17674823|17674823|17674823|17674823|17674823|17674823 3R - 17674219 17674343 3'utr alt FlyBase G52047.1 ATTTAACACATACTTTGCATGCGATTATTATTTTTGTGTTACACTTGCATTTAAAAACGCGCTTTAAACAATTGTATATGTATCTTATGTTAAGCAAATGAATTTAAAACCCAGCTACTTAAAAT 39 17674299 0.983518202 13 39 299 1 1.681241237 0.520833333 0.179487179 0.333333333 39 0 0 48 3R:17674219-17674343 8 alt FBtr0335027|FBtr0089416|FBtr0089414|FBtr0089417|FBtr0335026|FBtr0089415|FBtr0089412|FBtr0089413 17673730|17674184|17674184|17674184|17673730|17674184|17674184|17674184 17674823|17674823|17674823|17674823|17674823|17674823|17674823|17674823 TGCATTTA 8mer-A1 dme-miR-277-3p 3R - 17674234 17674310 3'utr alt FlyBase G39301.1 TTGTGTTACACTTGCATTTAAAAACGCGCTTTAAACAATTGTATATGTATCTTATGTTAAGCAAATGAATTTAAAAC 25 17674299 0.985353548 8 24 184 0.971428571 1.531478917 0.571428571 0.32 0.514285714 25 1 0 34 3R:17674234-17674310 8 24 1848 FBgn0038535 6868.54 219.92 337.8266667 0.003494192 0.109130593 0.071042349 1 1 1 0.25 dme-miR-2b-2-5p 7mer-A1 TGAAGAA 3R 17674567 17674573 - 3R_17674567_17674573_- 0.814620127 0.818920755 0.816770441 0.003041054 alt FBtr0089412|FBtr0089413|FBtr0335026|FBtr0089415|FBtr0089414|FBtr0089417|FBtr0335027|FBtr0089416 17674184|17674184|17673730|17674184|17674184|17674184|17673730|17674184 17674823|17674823|17674823|17674823|17674823|17674823|17674823|17674823 3R - 17674553 17674601 3'utr alt FlyBase G52051.1 TAGTAGCGAGAACCAACAATTATGAGAATGAAGAACTATGGAACGCTTT 35 17674563 0.676865933 5 34 151 0.975609756 1.602059991 0.12195122 0.142857143 0.268292683 35 1 0 40 3R:17674553-17674601 7 alt FBtr0335027|FBtr0089416|FBtr0089414|FBtr0089417|FBtr0335026|FBtr0089415|FBtr0089412|FBtr0089413 17673730|17674184|17674184|17674184|17673730|17674184|17674184|17674184 17674823|17674823|17674823|17674823|17674823|17674823|17674823|17674823 TGAAGAA 7mer-A1 dme-miR-2b-2-5p 3R - 17674552 17674597 3'utr alt FlyBase G39302.1 AGCGAGAACCAACAATTATGAGAATGAAGAACTATGGAACGCTTTA 21 17674578 0.950765909 5 19 86 0.967741935 1.477121255 0.161290323 0.285714286 0.516129032 21 1 0 30 3R:17674552-17674597 7 27 1849 FBgn0038535 6868.54 219.92 337.8266667 0.003930966 0.122771917 0.079922643 -10 5 -2.5 0.25 dme-miR-999-3p 6mer2-7 GTTAAC 3R 17688456 17688461 - 3R_17688456_17688461_- 0.793575679 0.964571866 0.879073773 0.120912573 osa FBtr0089582|FBtr0089581|FBtr0335025|FBtr0301487|FBtr0089583|FBtr0335024 17687816|17687816|17687816|17687816|17687816|17687816 17689817|17689817|17689817|17689817|17689817|17689817 3R - 17688369 17688492 3'utr osa FlyBase G52075.1 AAAAAATGAAACCCTAATGCTGTAATCTTATGTTAACTGTATTATTTGCTGGAAGTGCTGCTGCTTCGTTTTATTTTATATCGAACTTACTTAAGGCGTAAATGACAAGATAAATAATTAGGTT 45 17688475 0.978230577 17 43 376 0.924242424 1.785329835 0.242424242 0.311111111 0.53030303 45 5 0 61 3R:17688369-17688492 6 osa FBtr0089583|FBtr0335024|FBtr0335025|FBtr0301487|FBtr0089582|FBtr0089581 17687816|17687816|17687816|17687816|17687816|17687816 17689817|17689817|17689817|17689817|17689817|17689817 GTTAAC 6mer2-7 dme-miR-999-3p 3R - 17688425 17688489 3'utr osa FlyBase G39320.2 AAATGAAACCCTAATGCTGTAATCTTATGTTAACTGTATTATTTGCTGGAAGTGCTGCTGCTTCG 31 17688475 0.687210709 12 28 274 0.930232558 1.301029996 0.139534884 0.322580645 0.511627907 31 2 1 40 3R:17688425-17688489 6 19 1850 FBgn0261885 4320.86 50.56333333 77.47333333 0.004397273 0.375766366 0.245245676 14 14 14 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 17809699 17809705 - 3R_17809699_17809705_- 0.815457565 0.818075817 0.816766691 0.001851347 CG18012 FBtr0332430 17809399 17810834 3R - 17809681 17809745 3'utr CG18012 FlyBase G52154.1 TCAGCTGGCCGAGCAGCTGAGGATTTGGTTCGAAAATTTTCCAAAGAATCCCAGCATCCTGGAGA 19 17809707 0.8401087 7 19 94 1 1.322219295 0.238095238 0.105263158 0.19047619 19 0 0 21 3R:17809681-17809745 7 CG18012 FBtr0332430 17809399 17810834 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 17809681 17809721 3'utr CG18012 FlyBase G39379.1 TTGGTTCGAAAATTTTCCAAAGAATCCCAGCATCCTGGAGA 11 17809708 0.678133153 3 9 60 0.75 1.079181246 0.125 0.363636364 0.5625 11 4 0 12 3R:17809681-17809721 7 13 1851 FBgn0038552 964.0066667 73.48333333 112.6866667 0.013485384 0.176910864 0.115364137 2 3 2.5 0.25 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 3R 17810339 17810346 - 3R_17810339_17810346_- 0.410190743 0.438367762 0.424279252 0.019924218 CG18012 FBtr0332430 17809399 17810834 3R - 17810220 17810409 5'utr CG18012 FlyBase G52158.1 AGTTCTGTATGATCGTGCGCCCGCGCAATTCCATCCCATCGACTTGACTCACAAGCACGAGCTGTACCTGAAGCTGGCCAAAGACTACCCACAGTTCCAGGCCAAGGACGCCGAACAATCCGATGTTCTGGAGGCCACCGCTCTTACCCAAAAGCTGGCCAGCGGTGTTGTGCAGTACAGACCACAGCGA 742 17810347 0.934530663 17 734 2772 0.989784336 2.639486489 0.114642452 0.150943396 0.284903519 742 8 1 872 3R:17810220-17810409 8 CG18012 FBtr0332430 17809399 17810834 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R - 17810268 17810405 5'utr CG18012 FlyBase G39381.1 CTGTATGATCGTGCGCCCGCGCAATTCCATCCCATCGACTTGACTCACAAGCACGAGCTGTACCTGAAGCTGGCCAAAGACTACCCACAGTTCCAGGCCAAGGACGCCGAACAATCCGATGTTCTGGAGGCCACCGCT 377 17810347 0.92399419 14 366 1278 0.976311337 2.460145817 0.116751269 0.395225464 0.614213198 377 13 1 577 3R:17810268-17810405 8 416 1852 FBgn0038552 964.0066667 73.48333333 112.6866667 0.431532285 5.661147653 3.691652369 1 1 1 0.25 dme-miR-184-3p 6mer2-7 CCGTCC 3R 17810744 17810749 - 3R_17810744_17810749_- 0.894542144 0.878989143 0.886765643 0.010997632 CG18012 FBtr0332430 17809399 17810834 3R - 17810708 17810799 5'utr CG18012 FlyBase G52161.1 AAGGCCTTTTGGCAGACGCTCAGTCTGCTGATGGCTCTCATCTCCATTGGCCGTCCCAGCTTCCTACTCGTCCAGAATCCGCCCGGCATTCC 63 17810752 0.97856051 10 60 427 0.961038961 1.86923172 0.025974026 0.174603175 0.324675325 63 3 0 74 3R:17810708-17810799 6 CG18012 FBtr0332430 17809399 17810834 CCGTCC 6mer2-7 dme-miR-184-3p 3R - 17810711 17810860 intron-5'utr CG18012 FlyBase G39382.1 AATCCACGAGCTAACTGCCGTCCCAGTGACGAACCTAACACCCAAACTGCGCCTGCTCTTCAAGGCCTTTTGGCAGACGCTCAGTCTGCTGATGGCTCTCATCTCCATTGGCCGTCCCAGCTTCCTACTCGTCCAGAATCCGCCCGGCAT 57 17810753 0.975184987 13 55 344 0.961038961 1.568201724 0.090909091 0.263157895 0.454545455 57 2 1 74 3R:17810711-17810860 6 43 1853 FBgn0038552 964.0066667 73.48333333 112.6866667 0.044605501 0.585166704 0.381589067 3 4 3.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 18023164 18023171 + 3R_18023164_18023171_+ 0.625459418 0.583963849 0.604711634 0.02934182 CG7785 FBtr0083539 18022826 18023689 3R + 18023135 18023210 3'utr CG7785 FlyBase G43675.1 TTTTAGTTATTCCTTTGCCATATTTCTTCTCTAGTCAAAAAGAAAAGTTCCCAAGCTGAATTCTATCTCACAACCA 15 18023159 0.988209255 8 13 134 0.866666667 1.113943352 0.333333333 0 0 15 2 0 13 3R:18023135-18023210 8 CG7785 FBtr0083539 18022826 18023689 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 18023122 18023175 3'utr CG7785 FlyBase G33013.1 ATTTTAGTTTTAGTTTTAGTTATTCCTTTGCCATATTTCTTCTCTAGTCAAAAA 7 18023158 0.992553353 5 5 70 0.727272727 0.903089987 0 0.428571429 0.636363636 7 3 0 8 3R:18023122-18023175 8 7.5 1854 FBgn0038564 104 7.253333333 11.1 0.072115385 1.034007353 0.675675676 5 6 5.5 0.25 dme-miR-14-3p 6mer3-8 AAGACT 3R 18045381 18045386 - 3R_18045381_18045386_- 0.890974507 0.709283438 0.800128972 0.128475009 htl FBtr0083548|FBtr0083550|FBtr0083549 18045214|18045214|18045214 18045730|18045730|18045730 3R - 18045254 18045413 3'utr htl FlyBase G52166.1 GTATATGCGTAGTTCTAAGTTGAACTTAAGACTCGGTTGTATTTGCTGTTGTATTTCATATTGTACTGATCTTTGTAGTATTCGCAGTTTTATACTCGCTAAATTATACTCGTAGCCCATAAACATAAATGTTCTATCTTAGCGTTAGTTGCATGCCGCA 233 18045388 0.823965657 31 226 2282 0.971326165 2.432969291 0.254480287 0.158798283 0.297491039 233 8 0 271 3R:18045254-18045413 6 htl FBtr0083549|FBtr0083548|FBtr0083550 18045214|18045214|18045214 18045730|18045730|18045730 AAGACT 6mer3-8 dme-miR-14-3p 3R - 18045291 18045408 3'utr htl FlyBase G39386.1 TGCGTAGTTCTAAGTTGAACTTAAGACTCGGTTGTATTTGCTGTTGTATTTCATATTGTACTGATCTTTGTAGTATTCGCAGTTTTATACTCGCTAAATTATACTCGTAGCCCATAAA 182 18045388 0.822774116 27 168 1819 0.925795053 1.8162413 0.233215548 0.368131868 0.593639576 182 18 3 262 3R:18045291-18045408 6 84.5 1855 FBgn0010389 31.66666667 1.04 1.59 2.668421053 81.25 53.14465409 2 2 2 0.25 dme-miR-2a-2-5p 7mer-A1 GATGAGA 3R 18045707 18045713 - 3R_18045707_18045713_- 0.781289292 0.752343895 0.766816593 0.020467489 htl FBtr0083548|FBtr0083550|FBtr0083549 18045214|18045214|18045214 18045730|18045730|18045730 3R - 18045646 18045754 stop_codon htl FlyBase G52168.1 CTGCAGAAGTGGTGTAATTATTAAACGAATCAGGATCCTTAGATGAGATCAGGACAATTCAAGCCTGGTTTTTGAACCAAAGTCAAATTGTTAACTAGAGATTATGAAG 19 18045715 0.967657918 10 18 98 0.954545455 1.322219295 0.045454545 0.157894737 0.272727273 19 1 0 21 3R:18045646-18045754 7 htl FBtr0083549|FBtr0083548|FBtr0083550 18045214|18045214|18045214 18045730|18045730|18045730 GATGAGA 7mer-A1 dme-miR-2a-2-5p 3R - 18045677 18045723 3'utr htl FlyBase G39389.1 AGGATCCTTAGATGAGATCAGGACAATTCAAGCCTGGTTTTTGAACC 5 18045711 0.943060064 2 5 22 1 1 0 0.6 0.8 5 0 0 10 3R:18045677-18045723 7 4.5 1856 FBgn0010389 31.66666667 1.04 1.59 0.142105263 4.326923077 2.830188679 2 -2 0 0.25 dme-miR-184-5p 6mer3-8 TGATAA 3R 18179762 18179767 - 3R_18179762_18179767_- 0.987431639 0.804129497 0.895780568 0.129614158 cdm FBtr0083619|FBtr0336472 18179711|18179273 18179916|18179916 3R - 18179753 18179820 3'utr cdm FlyBase G52191.1 GTCAGCTCTGTAAATTGTCTCCAATTTTAACTTAAGTTCAAAAGTTCTCGACTTGATAAACTTTTATT 12 18179768 0.985539527 8 11 87 0.933333333 0.84509804 0.2 0.166666667 0.333333333 12 0 1 14 3R:18179753-18179820 6 cdm FBtr0083619|FBtr0336472 18179711|18179273 18179916|18179916 TGATAA 6mer3-8 dme-miR-184-5p 3R - 18179756 18179786 3'utr cdm FlyBase G39406.1 AGTTCAAAAGTTCTCGACTTGATAAACTTTT 6 18179768 0.733099961 3 5 41 1 0.954242509 0.111111111 0.5 0.666666667 6 0 0 9 3R:18179756-18179786 6 7 1857 FBgn0261532 596.8733333 20.49333333 31.33 0.011727781 0.341574496 0.223428024 1 1 1 0.25 dme-bantam-3p 6mer3-8 TGATCT 3R 18179860 18179865 - 3R_18179860_18179865_- 0.996087377 0.990047757 0.993067567 0.004270642 cdm FBtr0083619|FBtr0336472 18179711|18179273 18179916|18179916 3R - 18179851 18179899 3'utr cdm FlyBase G52192.1 AGTGGCCAAATGACATCTTTATCCATCCGGATTTTGATCTAGTTTCTAT 11 18179880 0.767583024 8 10 101 0.928571429 1.113943352 0.071428571 0.181818182 0.357142857 11 1 0 13 3R:18179851-18179899 6 cdm FBtr0083619|FBtr0336472 18179711|18179273 18179916|18179916 TGATCT 6mer3-8 dme-bantam-3p 3R - 18179837 18179927 stop_codon cdm FlyBase G39407.1 AGTTCCAGTGAAATGAGTGTATGCAATAAGTGGCCAAATGACATCTTTATCCATCCGGATTTTGATCTAGTTTCTATAATTGTATTTAGTT 11 18179865 0.993141179 7 9 108 0.846153846 1.041392685 0.076923077 0.090909091 0.230769231 11 2 0 11 3R:18179837-18179927 6 5.5 1858 FBgn0261532 596.8733333 20.49333333 31.33 0.009214685 0.268379961 0.17555059 15 0 7.5 0.25 dme-miR-8-3p 6mer2-7 AGTATT 3R 18192595 18192600 - 3R_18192595_18192600_- 0.975106942 0.998136821 0.986621881 0.016284598 Ssdp FBtr0330051|FBtr0083612 18192492|18192492 18194983|18195175 3R - 18192573 18192653 3'utr Ssdp FlyBase G52208.1 AATGAAGGGAATACAAAACAAAAAACCGATTGAATATGGAATATGTTTAAATAAGTATTTTAGTGTTAATTATACAATTTA 22 18192594 0.987054277 7 22 191 1 1.397940009 0.28 0.136363636 0.24 22 0 0 25 3R:18192573-18192653 6 Ssdp FBtr0330051|FBtr0083612 18192492|18192492 18194983|18195175 AGTATT 6mer2-7 dme-miR-8-3p 3R - 18192580 18192609 3'utr Ssdp FlyBase G39418.1 GTTTAAATAAGTATTTTAGTGTTAATTATA 7 18192594 0.632720012 4 7 72 1 0.954242509 0.222222222 0.285714286 0.444444444 7 0 0 9 3R:18192580-18192609 6 10.5 1859 FBgn0011481 1276.61 30.31666667 46.89333333 0.008224908 0.346344145 0.223912425 -6 -6 -6 0.25 dme-miR-276a-3p 7mer-m8 AGTTCCT 3R 18193769 18193775 - 3R_18193769_18193775_- 0.6264019 0.616879875 0.621640887 0.006733071 Ssdp FBtr0330051|FBtr0083612 18192492|18192492 18194983|18195175 3R - 18193722 18193803 3'utr Ssdp FlyBase G52215.1 AAACAACTAAAATGAAAATCGTTATTTAAGTTCCTTCCAAACGGCGAGCAATAATACCATTTGTATGGCATGAGCATGAGAT 38 18193773 0.983620513 7 37 286 0.977272727 1.33243846 0.227272727 0.131578947 0.25 38 0 1 43 3R:18193722-18193803 7 Ssdp FBtr0330051|FBtr0083612 18192492|18192492 18194983|18195175 AGTTCCT 7mer-m8 dme-miR-276a-3p 3R - 18193754 18193799 3'utr Ssdp FlyBase G39422.1 AACTAAAATGAAAATCGTTATTTAAGTTCCTTCCAAACGGCGAGCA 21 18193773 0.978717758 2 21 142 1 1.505149978 0.25 0.380952381 0.59375 21 0 0 32 3R:18193754-18193799 7 28 1860 FBgn0011481 1276.61 30.31666667 46.89333333 0.021933088 0.923584387 0.597099801 -2 -2 -2 0.25 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 3R 18239827 18239834 - 3R_18239827_18239834_- 0.602583835 0.605082442 0.603833138 0.001766777 CG7156 FBtr0083606|FBtr0083607 18239418|18239418 18239891|18241598 3R - 18239771 18239871 3'utr CG7156 FlyBase G52239.2 GCTATTGAGTCCGTAAAGTATTTTCTTATTTCGTACTGTACCTGAAATCCCATTTGTGATTCCTTGCTCAGTTCTGATTGGCATTGATTTTGATTACTTTC 393 18239835 0.807096895 22 389 2966 0.992125984 2.702430536 0.035433071 0.226463104 0.401574803 393 4 0 504 3R:18239771-18239871 8 CG7156 FBtr0083606|FBtr0083607 18239418|18239418 18239891|18241598 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R - 18239706 18239877 3'utr CG7156 FlyBase G39446.1 TGCTTTGCTATTGAGTCCGTAAAGTATTTTCTTATTTCGTACTGTACCTGAAATCCCATTTGTGATTCCTTGCTCAGTTCTGATTGGCATTGATTTTGATTACTTTCAAAGAATCTGAAGTCGCTCCATAGCGATTAATTATGTTGTGAATCTGCTATATTATTTTCTATGC 265 18239835 0.983908563 21 260 2036 0.983827493 1.86332286 0.064690027 0.309433962 0.506738544 265 2 4 365 3R:18239706-18239877 8 302.5 1861 FBgn0038588 127.6666667 6.006666667 9.273333333 2.369451697 50.36071032 32.62041697 1 1 1 0.25 dme-miR-184-3p 7mer-A1 CCGTCCA 3R 18241233 18241239 - 3R_18241233_18241239_- 0.477606358 0.49102429 0.484315324 0.009487888 CG7156 FBtr0083607 18239418 18241598 3R - 18241207 18241278 5'utr CG7156 FlyBase G52244.1 GCGACTACATATATGAGGCGGCTCTAGAGTTCAGTCATGCCGTCCAAGCGGAGGTTAACCTGGAGTATGCCG 79 18241241 0.848274654 5 76 419 0.95505618 1.929418926 0.359550562 0.126582278 0.224719101 79 4 0 85 3R:18241207-18241278 7 CG7156 FBtr0083607 18239418 18241598 CCGTCCA 7mer-A1 dme-miR-184-3p 3R - 18241197 18241265 5'utr CG7156 FlyBase G39449.1 TGAGGCGGCTCTAGAGTTCAGTCATGCCGTCCAAGCGGAGGTTAACCTGGAGTATGCCGAAGCCCACGA 35 18241241 0.966857282 4 32 168 0.918367347 1.176091259 0.224489796 0.285714286 0.489795918 35 2 2 45 3R:18241197-18241265 7 54 1862 FBgn0038588 127.6666667 6.006666667 9.273333333 0.422976501 8.990011099 5.823148814 2 2 2 0.25 dme-miR-33-5p 6mer3-8 CAATGC 3R 18248433 18248438 + 3R_18248433_18248438_+ 0.758480138 0.976525402 0.86750277 0.15418131 14-3-3epsilon FBtr0083565|FBtr0083567|FBtr0083568|FBtr0083566 18248287|18248287|18248287|18248287 18248579|18248579|18250550|18250279 3R + 18248390 18248441 3'utr 14-3-3epsilon FlyBase G43729.1 CAACAACAACACGACAACAACTTCAAGAACAACAACATGGAACCAATGCGGC 11 18248427 0.797135019 3 8 8 0.928571429 1.113943352 0.142857143 0.272727273 0.428571429 11 1 0 13 3R:18248390-18248441 6 14-3-3epsilon FBtr0083566|FBtr0083568|FBtr0083567|FBtr0083565 18248287|18248287|18248287|18248287 18250279|18250550|18248579|18248579 CAATGC 6mer3-8 dme-miR-33-5p 3R + 18248415 18248445 3'utr 14-3-3epsilon FlyBase G33047.1 AGAACAACAACATGGAACCAATGCGGCAACA 6 18248427 0.597286818 2 5 5 0.875 0.84509804 0 0.333333333 0.5 6 1 0 7 3R:18248415-18248445 6 6 1863 FBgn0020238 26098.09667 2256.556667 3469.193333 0.000229902 0.002658918 0.001729509 6 6 6 0.25 dme-miR-980-3p 6mer3-8 GGCAGC 3R 18256341 18256346 + 3R_18256341_18256346_+ 0.904106687 0.607578881 0.755842784 0.209676818 moi FBtr0299938 18256210 18257677 3R + 18256314 18256368 3'utr moi FlyBase G43740.1 TTCAAAACGTTACCTGGAAAGAATTCTGGCAGCGTGAGGGGCATGAGCTGCTCGA 8 18256340 0.941656517 4 8 33 1 0.903089987 0.5 0 0 8 0 0 8 3R:18256314-18256368 6 moi FBtr0299938 18256210 18257677 GGCAGC 6mer3-8 dme-miR-980-3p 3R + 18256319 18256367 3'utr moi FlyBase G33055.1 AACGTTACCTGGAAAGAATTCTGGCAGCGTGAGGGGCATGAGCTGCTCG 6 18256340 0.930580219 2 6 26 1 0.84509804 0.857142857 0.166666667 0.285714286 6 0 0 7 3R:18256319-18256367 6 6 1864 FBgn0261019 238.14 13.89333333 21.31333333 0.025195263 0.431861804 0.281513919 1 1 1 0.25 dme-miR-34-5p 7mer-A1 ACTGCCA 3R 18256673 18256679 + 3R_18256673_18256679_+ 0.818788376 0.815962409 0.817375393 0.001998284 moi FBtr0299938 18256210 18257677 3R + 18256651 18256702 3'utr moi FlyBase G43742.1 AGAGGAGGACGAATCATACTTGACTGCCAACGACGATCCCGAGGATTGTGAC 21 18256670 0.954755784 5 20 93 0.956521739 1.041392685 0.086956522 0.095238095 0.173913043 21 0 1 22 3R:18256651-18256702 7 moi FBtr0299938 18256210 18257677 ACTGCCA 7mer-A1 dme-miR-34-5p 3R + 18256650 18256688 3'utr moi FlyBase G33056.1 AAGAGGAGGACGAATCATACTTGACTGCCAACGACGATC 9 18256670 0.939734668 3 9 36 1 1.301029996 0.3 0.555555556 0.8 9 0 0 20 3R:18256650-18256688 7 15 1865 FBgn0261019 238.14 13.89333333 21.31333333 0.062988158 1.079654511 0.703784798 3 3 3 0.25 dme-miR-970-3p 8mer-A1 TCTTATGA 3R 18289429 18289436 - 3R_18289429_18289436_- 0.562134689 0.364913503 0.463524096 0.139456448 l(3)05822 FBtr0334313|FBtr0334314|FBtr0083596|FBtr0083595 18288864|18288864|18288864|18288864 18289578|18289578|18289578|18289578 3R - 18289387 18289462 3'utr l(3)05822 FlyBase G52264.1 ATTTTTACTATATTCTTTTCGAAAAATCTTATGAATCGAGCATATAGTCTAAGACAACTAGTTTGTAAGCGAAAAA 25 18289418 0.68079611 14 25 184 1 1.491361694 0.225806452 0.2 0.35483871 25 0 0 31 3R:18289387-18289462 8 l(3)05822 FBtr0083595|FBtr0083596|FBtr0334314|FBtr0334313 18288864|18288864|18288864|18288864 18289578|18289578|18289578|18289578 TCTTATGA 8mer-A1 dme-miR-970-3p 3R - 18289373 18289456 3'utr l(3)05822 FlyBase G39468.1 ACTATATTCTTTTCGAAAAATCTTATGAATCGAGCATATAGTCTAAGACAACTAGTTTGTAAGCGAAAAATCGAAAAATGTTTT 18 18289429 0.983193384 12 17 121 0.923076923 1.380211242 0 0.333333333 0.538461538 18 2 0 24 3R:18289373-18289456 8 11 1866 FBgn0010877 1339.8 56.08333333 85.52666667 0.008210181 0.196136701 0.128614857 -18 -7 -12.5 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 3R 18400472 18400477 - 3R_18400472_18400477_- 0.999847103 0.999998971 0.999923037 0.00010741 CG12333 FBtr0083655 18400371 18400826 3R - 18400421 18400569 3'utr CG12333 FlyBase G52310.1 TATCATTGTTATAGCATACGTATGTATATGCGTTGGGACTGGGCTAAACTCTTCGGAGTGCAGAGCTTCCGATGTCCAGACCCGATTTTATCTGTGTTTTACTACCATAATACATATTATAGACGTCTAAGGCATTAACGCTTTAGCCA 30 18400479 0.990918103 12 28 303 0.885714286 1.491361694 0.228571429 0.166666667 0.285714286 30 4 0 31 3R:18400421-18400569 6 CG12333 FBtr0083655 18400371 18400826 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 18400463 18400544 3'utr CG12333 FlyBase G39497.1 ATATGCGTTGGGACTGGGCTAAACTCTTCGGAGTGCAGAGCTTCCGATGTCCAGACCCGATTTTATCTGTGTTTTACTACCA 17 18400480 0.99169923 8 15 173 0.923076923 1.079181246 0.384615385 0.411764706 0.615384615 17 1 1 24 3R:18400463-18400544 6 16 1867 FBgn0038617 154.6666667 8.656666667 13.23 0.103448276 1.848286484 1.209372638 2 3 2.5 0.25 dme-miR-263a-5p 6mer2-7 TGCCAT 3R 18404478 18404483 + 3R_18404478_18404483_+ 0.981390673 0.953083696 0.967237184 0.020016072 koko FBtr0334146|FBtr0334148|FBtr0334149|FBtr0334147 18404444|18404444|18404444|18404444 18404726|18404726|18404726|18404726 3R + 18404416 18404491 stop_codon koko FlyBase G43770.1 AAGAACGAGGGCTTCCTGAATGCCACCTAATCGCTGAGAGAGACTGCCAAAACCATTCCTTCTGCCATCTGAACTT 7 18404471 0.963368552 5 7 38 1 1 0.2 0.285714286 0.5 7 0 0 10 3R:18404416-18404491 6 koko FBtr0334146|FBtr0334148|FBtr0334149|FBtr0334147 18404444|18404444|18404444|18404444 18404726|18404726|18404726|18404726 TGCCAT 6mer2-7 dme-miR-263a-5p 3R + 18404444 18404491 stop_codon koko FlyBase G33079.1 AATCGCTGAGAGAGACTGCCAAAACCATTCCTTCTGCCATCTGAACTT 6 18404471 0.723209429 4 6 31 1 0.954242509 0 0.5 0.666666667 6 0 0 9 3R:18404444-18404491 6 3 1868 FBgn0264816 41 4.086666667 6.296666667 0.073170732 0.734094617 0.476442562 7 7 7 0.25 dme-miR-1003-3p 7mer-A1 TGTGAGA 3R 18406767 18406773 - 3R_18406767_18406773_- 0.542666949 0.487136202 0.514901575 0.039266135 CG31122 FBtr0083653|FBtr0301432|FBtr0333831 18406629|18406629|18406062 18407464|18407881|18407881 3R - 18406751 18406794 3'utr CG31122 FlyBase G52315.1 CTGGGGGCAAAGTATCAAATTTGTGAGACGAGAGCGTCGATAGC 19 18406774 0.87305092 4 18 112 0.961538462 1.096910013 0.346153846 0.263157895 0.461538462 19 0 1 25 3R:18406751-18406794 7 CG31122 FBtr0333831|FBtr0301432|FBtr0083653 18406062|18406629|18406629 18407881|18407881|18407464 TGTGAGA 7mer-A1 dme-miR-1003-3p 3R - 18406748 18406789 3'utr CG31122 FlyBase G39502.1 GGCAAAGTATCAAATTTGTGAGACGAGAGCGTCGATAGCAAT 12 18406774 0.690453005 2 11 64 1 1.255272505 0.444444444 0.416666667 0.611111111 12 0 0 18 3R:18406748-18406789 7 15 1869 FBgn0051122 626.0666667 23.62 36.17666667 0.02395911 0.635055038 0.414631899 1 1 1 0.25 dme-miR-8-3p 7mer-A1 AGTATTA 3R 18406894 18406900 - 3R_18406894_18406900_- 0.796862701 0.788891215 0.792876958 0.005636702 CG31122 FBtr0083653|FBtr0301432|FBtr0333831 18406629|18406629|18406062 18407464|18407881|18407881 3R - 18406844 18406925 3'utr CG31122 FlyBase G52316.1 ACACACCCACAAAGCCCTCTGATTAAGTATTACTTAGCGTACGTAAGCTAACTTTAAGTTGCAACTGGCAAAAAGCAAGCCA 49 18406903 0.989206283 7 43 409 0.873015873 1.263241435 0.079365079 0.244897959 0.412698413 49 6 2 55 3R:18406844-18406925 7 CG31122 FBtr0333831|FBtr0301432|FBtr0083653 18406062|18406629|18406629 18407881|18407881|18407464 AGTATTA 7mer-A1 dme-miR-8-3p 3R - 18406865 18406988 3'utr CG31122 FlyBase G39503.1 CCAATGAATTTATACATCATCCGCACAGACGCATTAATCTAACCAGCCTAAAATCTAAATCACACACACCCACAAAGCCCTCTGATTAAGTATTACTTAGCGTACGTAAGCTAACTTTAAGTTG 35 18406903 0.985723309 12 33 260 0.96 1.681241237 0.02 0.285714286 0.5 35 2 0 48 3R:18406865-18406988 7 37 1870 FBgn0051122 626.0666667 23.62 36.17666667 0.059099137 1.566469094 1.022758684 3 3 3 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3R 18407070 18407076 - 3R_18407070_18407076_- 0.521086169 0.521148157 0.521117163 4.38E-05 CG31122 FBtr0083653|FBtr0301432|FBtr0333831 18406629|18406629|18406062 18407464|18407881|18407881 3R - 18407015 18407147 3'utr CG31122 FlyBase G52318.1 GCTGATTTTACAGACCTCTCTTATTTTATACAAACACTCCATGCTATTTATTTGTAATTGATGAAAAGATTTGTGATTTGCGCACATGATATAAAGTAAACATCGTAGAGCAAGCACTGTAATCGTAGCGTGT 109 18407077 0.845944009 16 106 824 0.977272727 1.633468456 0.431818182 0.155963303 0.303030303 109 1 2 129 3R:18407015-18407147 7 CG31122 FBtr0333831|FBtr0301432|FBtr0083653 18406062|18406629|18406629 18407881|18407881|18407464 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 18407020 18407092 3'utr CG31122 FlyBase G39504.1 AATTGATGAAAAGATTTGTGATTTGCGCACATGATATAAAGTAAACATCGTAGAGCAAGCACTGTAATCGTAG 67 18407070 0.979814043 7 67 468 1 2.004321374 0.514851485 0.402985075 0.603960396 67 0 0 101 3R:18407020-18407092 7 79 1871 FBgn0051122 626.0666667 23.62 36.17666667 0.126184645 3.344623201 2.183728001 1 -6 -2.5 0.25 dme-miR-965-3p 7mer-m8 TACGCTT 3R 18407474 18407480 - 3R_18407474_18407480_- 0.62020426 0.619962142 0.620083201 0.000171261 CG31122 FBtr0301432|FBtr0333831 18406629|18406062 18407881|18407881 3R - 18407307 18407517 3'utr CG31122 FlyBase G52320.1 AGTGTCGCTCGAAACGCAAACTGCAGAAATTGTATTATACGCTTTGCCGTTAGATCTGTAGCCTAACTATATCTATGTGTACTTGTACGAGAGAAAGTTTCTTAGAACCACCAGCAGCATCAGCACTTAGCTTAAGTGGAGTCACACCTACCACGTCCTATATATATTATATGTATGTCCAGTCCCTTCGTCCCTTCATTTTTTGTACATG 77 18407474 0.986065146 27 70 615 0.917647059 1.591064607 0.129411765 0.090909091 0.176470588 77 6 1 78 3R:18407307-18407517 7 CG31122 FBtr0333831|FBtr0301432 18406062|18406629 18407881|18407881 TACGCTT 7mer-m8 dme-miR-965-3p 3R - 18407349 18407525 3'utr CG31122 FlyBase G39506.1 TCATCATCAGTGTCGCTCGAAACGCAAACTGCAGAAATTGTATTATACGCTTTGCCGTTAGATCTGTAGCCTAACTATATCTATGTGTACTTGTACGAGAGAAAGTTTCTTAGAACCACCAGCAGCATCAGCACTTAGCTTAAGTGGAGTCACACCTACCACGTCCTATATATATTA 65 18407473 0.986390105 20 61 519 0.948453608 1.662757832 0.164948454 0.384615385 0.587628866 65 4 1 92 3R:18407349-18407525 7 42.5 1872 FBgn0051122 626.0666667 23.62 36.17666667 0.067884144 1.799322608 1.174790381 -6 -7 -6.5 0.25 dme-bantam-3p 7mer-m8 TGATCTC 3R 18407706 18407712 - 3R_18407706_18407712_- 0.652714292 0.658030225 0.655372258 0.003758909 CG31122 FBtr0301432|FBtr0333831 18406629|18406062 18407881|18407881 3R - 18407662 18407776 3'utr CG31122 FlyBase G52321.1 CAGCAGCTGCTGGCTGCCGCCCCGGAGCTCGCGCTGGCCTCCTCATCGCGCCTGGCTGCGGCCCTGATCTCGTCGGCGGTGGCTCTGAGCGCCTCGTCCGCGAGCCTTGTAAATA 105 18407704 0.975645542 9 101 639 0.962962963 2.017033339 0.287037037 0.028571429 0.055555556 105 4 0 104 3R:18407662-18407776 7 CG31122 FBtr0333831|FBtr0301432 18406062|18406629 18407881|18407881 TGATCTC 7mer-m8 dme-bantam-3p 3R - 18407685 18407741 3'utr CG31122 FlyBase G39507.1 GGCCTCCTCATCGCGCCTGGCTGCGGCCCTGATCTCGTCGGCGGTGGCTCTGAGCGC 59 18407704 0.672863931 7 57 332 0.989130435 1.959041392 0.369565217 0.305084746 0.554347826 59 1 0 91 3R:18407685-18407741 7 77.5 1873 FBgn0051122 626.0666667 23.62 36.17666667 0.123788734 3.281117697 2.142264812 -8 -8 -8 0.25 dme-miR-283-5p 8mer-m1 TGATATTT 3R 18415187 18415194 - 3R_18415187_18415194_- 0.489522575 0.503013711 0.496268143 0.009539648 fru FBtr0083644 18414271 18416776 3R - 18415174 18415210 3'utr fru FlyBase G52333.1 AATATAAAATTAAATGTGATATTTTCGGCACAAAACT 8 18415188 0.981056465 5 6 71 0.727272727 0.602059991 0 0.25 0.454545455 8 2 1 8 3R:18415174-18415210 8 fru FBtr0083644 18414271 18416776 TGATATTT 8mer-m1 dme-miR-283-5p 3R - 18415181 18415217 3'utr fru FlyBase G39515.1 AATATAAAATATAAAATTAAATGTGATATTTTCGGCA 11 18415187 0.650741089 6 11 98 1 1.176091259 0 0.272727273 0.466666667 11 0 0 15 3R:18415181-18415217 8 9.5 1874 FBgn0004652 1186.113333 24.98 38.30666667 0.008009353 0.380304243 0.247998608 -6 -7 -6.5 0.25 dme-miR-31a-5p 6mer3-8 TCTTGC 3R 18416530 18416535 - 3R_18416530_18416535_- 0.682243412 0.610291347 0.646267379 0.050877818 fru FBtr0083641|FBtr0083644 18415471|18414271 18416776|18416776 3R - 18416507 18416561 3'utr fru FlyBase G52342.1 AATCGCTGCAGTTCTAGGTGGATTTTTCTTGCATTTAGTCGTCGTCCAGTCGTGT 32 18416533 0.907746261 5 32 390 1 1.556302501 0.277777778 0.09375 0.194444444 32 0 0 36 3R:18416507-18416561 6 fru FBtr0083644|FBtr0083641 18414271|18415471 18416776|18416776 TCTTGC 6mer3-8 dme-miR-31a-5p 3R - 18416491 18416546 3'utr fru FlyBase G39525.1 AGGTGGATTTTTCTTGCATTTAGTCGTCGTCCAGTCGTGTACATTACCCACTAGCT 17 18416533 0.993504078 2 16 195 0.956521739 1.342422681 0.695652174 0.294117647 0.47826087 17 1 0 22 3R:18416491-18416546 6 23.5 1875 FBgn0004652 1186.113333 24.98 38.30666667 0.019812609 0.940752602 0.61347024 -2 -2 -2 0.25 dme-miR-79-3p 7mer-A1 AGCTTTA 3R 18416733 18416739 - 3R_18416733_18416739_- 0.823308633 0.50462507 0.663966852 0.225343264 fru FBtr0083641|FBtr0083644 18415471|18414271 18416776|18416776 3R - 18416728 18416777 stop_codon fru FlyBase G52343.1 AGGGCGTGGCCGGGGCCCAAGTGCAGCCCATCACCGCCAGCTTTACCAGC 10 18416747 0.836871863 3 10 26 1 1.079181246 0.166666667 0.2 0.333333333 10 0 0 12 3R:18416728-18416777 7 fru FBtr0083644|FBtr0083641 18414271|18415471 18416776|18416776 AGCTTTA 7mer-A1 dme-miR-79-3p 3R - 18416724 18416758 3'utr fru FlyBase G39526.1 AGTGCAGCCCATCACCGCCAGCTTTACCAGCAGCA 6 18416747 0.821158962 3 5 16 0.875 0.84509804 0 0.333333333 0.5 6 1 0 7 3R:18416724-18416758 7 5 1876 FBgn0004652 1186.113333 24.98 38.30666667 0.004215449 0.200160128 0.130525583 8 8 8 0.25 dme-miR-92b-3p 8mer-A1 GTGCAATA 3R 18419914 18419921 - 3R_18419914_18419921_- 0.415111115 0.611752971 0.513432043 0.139046821 fru FBtr0330040|FBtr0083640|FBtr0083650|FBtr0083645 18418714|18418714|18418714|18418714 18422076|18422637|18422637|18422637 3R - 18419865 18419935 3'utr fru FlyBase G52347.1 GAATCGTATCGTATGTGCAATATGACTAGTTTTCGTTTAAGGTGCAGGAGGATGGATAATGGATGATGAAT 8 18419922 0.980097056 4 8 55 1 0.954242509 0.111111111 0.125 0.222222222 8 0 0 9 3R:18419865-18419935 8 fru FBtr0083650|FBtr0083645|FBtr0083640|FBtr0330040 18418714|18418714|18418714|18418714 18422637|18422637|18422637|18422076 GTGCAATA 8mer-A1 dme-miR-92b-3p 3R - 18419893 18419931 3'utr fru FlyBase G39528.1 CGTATCGTATGTGCAATATGACTAGTTTTCGTTTAAGGT 9 18419922 0.942952494 4 9 60 1 1.255272505 0.166666667 0.555555556 0.777777778 9 0 0 18 3R:18419893-18419931 8 7.5 1877 FBgn0004652 1186.113333 24.98 38.30666667 0.006323173 0.300240192 0.195788375 1 1 1 0.25 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 3R 18419992 18419999 - 3R_18419992_18419999_- 0.597673867 0.580250397 0.588962132 0.012320275 fru FBtr0330040|FBtr0083640|FBtr0083650|FBtr0083645 18418714|18418714|18418714|18418714 18422076|18422637|18422637|18422637 3R - 18419937 18420034 3'utr fru FlyBase G52348.1 TCGAAAGAATTCTATCATTTGTGTGGTATGCAAAATGGTGCTAAATCCAAATATACTTTAAAGTATACCGAGTAGAACGAGAGGAGGCCAGTACTCCT 68 18419999 0.981125282 10 65 467 0.948051948 1.86332286 0.337662338 0.132352941 0.233766234 68 4 0 73 3R:18419937-18420034 8 fru FBtr0083650|FBtr0083645|FBtr0083640|FBtr0330040 18418714|18418714|18418714|18418714 18422637|18422637|18422637|18422076 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 3R - 18419975 18420023 3'utr fru FlyBase G39529.1 CTATCATTTGTGTGGTATGCAAAATGGTGCTAAATCCAAATATACTTTA 32 18419999 0.885883284 4 31 215 0.975 1.591064607 0.275 0.21875 0.375 32 1 0 39 3R:18419975-18420023 8 45.5 1878 FBgn0004652 1186.113333 24.98 38.30666667 0.038360584 1.821457166 1.187782805 0 0 0 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 18420163 18420169 - 3R_18420163_18420169_- 0.743324415 0.738674428 0.740999421 0.003288047 fru FBtr0330040|FBtr0330040|FBtr0330040|FBtr0083640|FBtr0083640|FBtr0083640|FBtr0083650|FBtr0083650|FBtr0083650|FBtr0083645|FBtr0083645|FBtr0083645 18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714 18422076|18422076|18422076|18422637|18422637|18422637|18422637|18422637|18422637|18422637|18422637|18422637 3R - 18420146 18420223 3'utr fru FlyBase G52350.1 ATTTTTAACGCTGTTTTGTTAAACAAAAATTTAAGAAATTTATCTATTATATGATGTGATAACTATAGTAAAACTAAA 38 18420172 0.651270559 12 30 348 0.840909091 1.568201724 0.045454545 0.105263158 0.227272727 38 7 0 37 3R:18420146-18420223 7 fru FBtr0083650|FBtr0083650|FBtr0083650|FBtr0083645|FBtr0083645|FBtr0083645|FBtr0083640|FBtr0083640|FBtr0083640|FBtr0330040|FBtr0330040|FBtr0330040 18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714 18422637|18422637|18422637|18422637|18422637|18422637|18422637|18422637|18422637|18422076|18422076|18422076 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 18420146 18420191 3'utr fru FlyBase G39531.1 AAGAAATTTATCTATTATATGATGTGATAACTATAGTAAAACTAAA 34 18420172 0.622556018 8 29 299 0.823529412 1.021189299 0 0.382352941 0.588235294 34 6 3 42 3R:18420146-18420191 7 32 1879 FBgn0004652 1186.113333 24.98 38.30666667 0.026978872 1.28102482 0.835363731 3 3 3 0.25 dme-miR-12-5p 7mer-A1 ATACTCA 3R 18422039 18422045 - 3R_18422039_18422045_- 0.809286052 0.809318028 0.80930204 2.26E-05 fru FBtr0330040|FBtr0083640|FBtr0083650|FBtr0083645 18418714|18418714|18418714|18418714 18422076|18422637|18422637|18422637 3R - 18422015 18422075 3'utr fru FlyBase G52356.1 AACAGCAACAGCAGCAACAGCAACCAATTGATACTCAAAGCAAATGTAATTTAGACGAGAA 351 18422047 0.909494402 5 347 1100 0.990498812 2.620136055 0.042755344 0.179487179 0.315914489 351 4 0 417 3R:18422015-18422075 7 fru FBtr0083650|FBtr0083645|FBtr0083640|FBtr0330040 18418714|18418714|18418714|18418714 18422637|18422637|18422637|18422076 ATACTCA 7mer-A1 dme-miR-12-5p 3R - 18422022 18422072 3'utr fru FlyBase G39536.1 AGCAACAGCAGCAACAGCAACCAATTGATACTCAAAGCAAATGTAATTTAG 195 18422047 0.913703431 5 189 614 0.971061093 2.178976947 0.064308682 0.41025641 0.63022508 195 8 1 302 3R:18422022-18422072 7 271.5 1880 FBgn0004652 1186.113333 24.98 38.30666667 0.228898869 10.86869496 7.087539158 2 2 2 0.25 dme-miR-980-3p 8mer-A1 GGCAGCTA 3R 18431318 18431325 - 3R_18431318_18431325_- 0.667853485 0.667996295 0.66792489 0.000100975 fru FBtr0083647 18431231 18431446 3R - 18431303 18431350 5'utr fru FlyBase G52369.1 AATATATTTAGTAACCTAAGAACTTGGCAGCTACTATGAACAAAAGCA 119 18431326 0.83458356 6 115 727 0.95035461 1.826074803 0.014184397 0.168067227 0.29787234 119 6 1 134 3R:18431303-18431350 8 fru FBtr0083647 18431231 18431446 GGCAGCTA 8mer-A1 dme-miR-980-3p 3R - 18431303 18431350 5'utr fru FlyBase G39543.1 AATATATTTAGTAACCTAAGAACTTGGCAGCTACTATGAACAAAAGCA 63 18431326 0.819567414 6 61 363 0.968421053 1.963787827 0.063157895 0.333333333 0.557894737 63 3 0 92 3R:18431303-18431350 8 91 1881 FBgn0004652 1186.113333 24.98 38.30666667 0.076721168 3.642914331 2.375565611 1 1 1 0.25 dme-miR-92b-3p 8mer-A1 GTGCAATA 3R 18650739 18650746 - 3R_18650739_18650746_- 0.489198786 0.628503379 0.558851083 0.098503227 CG31224 FBtr0344327|FBtr0083691|FBtr0344326 18650119|18650119|18650119 18651140|18651140|18651140 3R - 18650702 18650770 3'utr CG31224 FlyBase G52400.1 TAGTAAAATGTTATACCTAGTTCAGTGCAATATACATCGATTAAATACTATATGCCGCGATACTTTTTC 16 18650750 0.767806301 6 15 119 0.952380952 1.301029996 0.047619048 0.1875 0.380952381 16 1 0 20 3R:18650702-18650770 8 CG31224 FBtr0344326|FBtr0083691|FBtr0344327 18650119|18650119|18650119 18651140|18651140|18651140 GTGCAATA 8mer-A1 dme-miR-92b-3p 3R - 18650733 18650761 3'utr CG31224 FlyBase G39567.1 GTTATACCTAGTTCAGTGCAATATACATC 8 18650749 0.668143395 5 7 51 0.818181818 0.954242509 0.090909091 0.25 0.454545455 8 2 0 9 3R:18650733-18650761 8 9.5 1882 FBgn0051224 1247.72 20.83666667 31.93333333 0.007613888 0.455927052 0.297494781 4 3 3.5 0.25 dme-miR-7-5p 6mer2-7 TCTTCC 3R 18650839 18650844 - 3R_18650839_18650844_- 0.996913506 0.998260518 0.997587012 0.000952473 CG31224 FBtr0344327|FBtr0083691|FBtr0344326 18650119|18650119|18650119 18651140|18651140|18651140 3R - 18650782 18650875 3'utr CG31224 FlyBase G52401.1 ACGTAGCTAAATGTGAAAGTGTTCCCCATTCTCTTCCTCCGGATTCGAATCACAATTCGCGTCAACCGCTTTAATCCCGTTTAGGTTTTAGATT 22 18650842 0.985943217 9 21 182 0.958333333 1.361727836 0.291666667 0.090909091 0.166666667 22 1 0 23 3R:18650782-18650875 6 CG31224 FBtr0344326|FBtr0083691|FBtr0344327 18650119|18650119|18650119 18651140|18651140|18651140 TCTTCC 6mer2-7 dme-miR-7-5p 3R - 18650782 18650861 3'utr CG31224 FlyBase G39568.1 GAAAGTGTTCCCCATTCTCTTCCTCCGGATTCGAATCACAATTCGCGTCAACCGCTTTAATCCCGTTTAGGTTTTAGATT 10 18650844 0.982479117 8 10 79 1 1.146128036 0.071428571 0.3 0.5 10 0 0 14 3R:18650782-18650861 6 10 1883 FBgn0051224 1247.72 20.83666667 31.93333333 0.008014619 0.479923212 0.313152401 -2 0 -1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 18665277 18665283 + 3R_18665277_18665283_+ 0.797201181 0.77537677 0.786288975 0.015432181 Gos28 FBtr0083661|FBtr0083661|FBtr0083661 18665169|18665169|18665169 18665307|18665307|18665307 3R + 18665237 18665301 3'utr Gos28 FlyBase G43803.1 TTAGTTTGTTTTTTCCGACGGTATATGTGTATGATTAACTTGTGATAGCAATAAAATGTACTATA 67 18665274 0.66452229 13 61 524 0.898734177 1.374137094 0.063291139 0.164179104 0.291139241 67 6 2 71 3R:18665237-18665301 7 Gos28 FBtr0083661|FBtr0083661|FBtr0083661 18665169|18665169|18665169 18665307|18665307|18665307 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 18665251 18665302 3'utr Gos28 FlyBase G33101.1 CCGACGGTATATGTGTATGATTAACTTGTGATAGCAATAAAATGTACTATAT 32 18665276 0.671890215 8 28 253 0.888888889 0.903089987 0 0.34375 0.533333333 32 1 4 40 3R:18665251-18665302 7 44.5 1884 FBgn0044871 146.6666667 20.69333333 31.63666667 0.303409091 2.150451031 1.406595722 3 1 2 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 18674633 18674640 + 3R_18674633_18674640_+ 0.500019559 0.496791638 0.498405599 0.002282541 CG7702 FBtr0083665|FBtr0083664 18674410|18674410 18674679|18674679 3R + 18674606 18674648 3'utr CG7702 FlyBase G43809.1 TAGTGAAGCCATCGATGTTTGTGTATTGTACTTAAGATCCGCA 9 18674632 0.961283387 6 9 82 1 1.041392685 0.090909091 0.111111111 0.272727273 9 0 0 11 3R:18674606-18674648 8 CG7702 FBtr0083665|FBtr0083664 18674410|18674410 18674679|18674679 GTACTTAA 8mer-A1 dme-miR-252-5p 3R + 18674610 18674648 3'utr CG7702 FlyBase G33103.1 GAAGCCATCGATGTTTGTGTATTGTACTTAAGATCCGCA 6 18674632 0.988110251 3 5 56 1 1 0 0.333333333 0.6 6 0 0 10 3R:18674610-18674648 8 6.5 1885 FBgn0038638 520.81 26.77666667 41.05 0.012480559 0.242748662 0.158343484 1 1 1 0.25 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 18759343 18759350 - 3R_18759343_18759350_- 0.380575158 0.379018619 0.379796888 0.001100682 CG7720 FBtr0083679|FBtr0301200|FBtr0301199|FBtr0339167|FBtr0301201|FBtr0083678 18759234|18759234|18759234|18759234|18759234|18759234 18759467|18759467|18759467|18759467|18759467|18759467 3R - 18759261 18759378 3'utr CG7720 FlyBase G52513.1 AGCCAAGTGTTTCATGTCTATAAAGATGCTGTGATTTTCTGTGCGCGACTGTTGTTGAGCAATTGCTCGCGCATTTCATTCGCATGTACTTAACGCATATGTGTGTGCGTGTCAGCAT 93 18759352 0.858397016 14 89 865 0.964285714 2.033423755 0.080357143 0.193548387 0.330357143 93 4 0 108 3R:18759261-18759378 8 CG7720 FBtr0301201|FBtr0083678|FBtr0301199|FBtr0339167|FBtr0083679|FBtr0301200 18759234|18759234|18759234|18759234|18759234|18759234 18759467|18759467|18759467|18759467|18759467|18759467 CTGTGATT 8mer-m1 dme-miR-308-3p 3R - 18759324 18759374 3'utr CG7720 FlyBase G39641.1 AAGTGTTTCATGTCTATAAAGATGCTGTGATTTTCTGTGCGCGACTGTTGT 69 18759352 0.867694423 8 68 678 0.981981982 2.037426498 0.081081081 0.376811594 0.612612613 69 2 0 109 3R:18759324-18759374 8 72.5 1886 FBgn0038652 105.2733333 4.686666667 7.096666667 0.688683427 15.46941679 10.21606388 2 2 2 0.25 dme-miR-14-3p 6mer3-8 AAGACT 3R 19045871 19045876 - 3R_19045871_19045876_- 0.979553539 0.568860369 0.774206954 0.290403876 cdi FBtr0305321|FBtr0083716 19044880|19045692 19047703|19046616 3R - 19045842 19045913 3'utr cdi FlyBase G52542.1 TTTAAATAATTACATAGACTTACCGACTTGAGGTTTTAAGACTTAAAGCCCCCTTTCCCTCGAAAATTGTAC 59 19045878 0.704452325 10 55 400 0.940298507 1.799340549 0.089552239 0.118644068 0.223880597 59 4 0 63 3R:19045842-19045913 6 cdi FBtr0305321|FBtr0083716 19044880|19045692 19047703|19046616 AAGACT 6mer3-8 dme-miR-14-3p 3R - 19045821 19045912 3'utr cdi FlyBase G39657.2 TTAAATAATTACATAGACTTACCGACTTGAGGTTTTAAGACTTAAAGCCCCCTTTCCCTCGAAAATTGTACAGATGATCCCGGATCGATTTG 32 19045859 0.771551338 12 28 179 0.906976744 1.591064607 0.069767442 0.21875 0.418604651 32 4 0 39 3R:19045821-19045912 6 26 1887 FBgn0004876 813.04 17.12 26.29666667 0.031978746 1.518691589 0.988718469 2 -17 -7.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3R 19046225 19046230 - 3R_19046225_19046230_- 0.405134084 0.652626539 0.528880311 0.175003554 cdi FBtr0305321|FBtr0083716 19044880|19045692 19047703|19046616 3R - 19046211 19046251 3'utr cdi FlyBase G52543.1 AATCATACGTCGTACTGGTTCCTAGTCCTTCAAATTTACTT 129 19046236 0.742247222 9 126 960 0.98136646 2.198657087 0.080745342 0.224806202 0.378881988 129 3 0 158 3R:19046211-19046251 6 cdi FBtr0305321|FBtr0083716 19044880|19045692 19047703|19046616 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3R - 19046208 19046251 3'utr cdi FlyBase G39659.1 AATCATACGTCGTACTGGTTCCTAGTCCTTCAAATTTACTTCGC 97 19046236 0.717804134 9 96 738 0.979310345 2.152288344 0.117241379 0.360824742 0.572413793 97 3 0 142 3R:19046208-19046251 6 112.5 1888 FBgn0004876 813.04 17.12 26.29666667 0.138369576 6.571261682 4.278108759 6 6 6 0.25 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 19046594 19046599 - 3R_19046594_19046599_- 0.623347779 0.436029766 0.529688772 0.132453828 cdi FBtr0305321|FBtr0083716 19044880|19045692 19047703|19046616 3R - 19046407 19046627 stop_codon cdi FlyBase G52545.1 AAGGCGGCTAGCTGTGGTGGGGACCTTGTGATGAAAACCCCGACCTGATTCATATTTAATAACTTATTTCTTCGATTCTTTGAGATTTTTATCCCCATACACGATTCCTTTATACCTGGCAGTACCACTTGATAAAAATACAAAAAATAATCGCAAATAATTTTGCCCACAAAAGTTGGTTAGTTTACGATGCCTAAAGGTTTAATTTGTAAGTAAATAGT 51 19046601 0.980927444 23 48 360 0.938461538 1.183269844 0.2 0.235294118 0.4 51 1 3 61 3R:19046407-19046627 6 cdi FBtr0305321|FBtr0083716 19044880|19045692 19047703|19046616 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R - 19046502 19046626 stop_codon cdi FlyBase G39660.1 AGGCGGCTAGCTGTGGTGGGGACCTTGTGATGAAAACCCCGACCTGATTCATATTTAATAACTTATTTCTTCGATTCTTTGAGATTTTTATCCCCATACACGATTCCTTTATACCTGGCAGTACC 32 19046602 0.823727324 13 31 227 0.978723404 1.662757832 0.404255319 0.34375 0.553191489 32 1 0 46 3R:19046502-19046626 6 14.5 1889 FBgn0004876 813.04 17.12 26.29666667 0.017834301 0.846962617 0.551400684 2 3 2.5 0.25 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 19139080 19139087 - 3R_19139080_19139087_- 0.624468987 0.625338622 0.624903804 0.0006149 Ppcs FBtr0083752|FBtr0330044 19139052|19139052 19141595|19141415 3R - 19139068 19139108 3'utr Ppcs FlyBase G52566.1 TGTATTAAACTGGAAATGAAATAGCTTTAAATGTATAGACA 6 19139088 0.869527985 3 6 46 1 0.77815125 0.166666667 0 0 6 0 0 6 3R:19139068-19139108 8 Ppcs FBtr0083752|FBtr0330044 19139052|19139052 19141595|19141415 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R - 19139069 19139109 3'utr Ppcs FlyBase G39679.1 GTGTATTAAACTGGAAATGAAATAGCTTTAAATGTATAGAC 5 19139087 0.980026608 4 4 29 0.777777778 0.84509804 0.333333333 0.8 0.888888889 5 2 0 7 3R:19139069-19139109 8 5 1890 FBgn0261285 111.1666667 3.44 5.32 0.044977511 1.453488372 0.939849624 1 0 0.5 0.25 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3R 19140901 19140907 - 3R_19140901_19140907_- 0.536266394 0.526056737 0.531161565 0.007219348 Ppcs FBtr0083752|FBtr0330044 19139052|19139052 19141595|19141415 3R - 19140880 19140961 3'utr Ppcs FlyBase G52572.1 TAGCGACAGAGTGCATGCAATCGCAATTTGCCGGACGTTGTGTCCCTGGACAACTGGTGCTGTGTGTCAGTGGCAGGCGACG 10 19140905 0.977463626 8 10 65 1 1.041392685 0.181818182 0.1 0.181818182 10 0 0 11 3R:19140880-19140961 7 Ppcs FBtr0083752|FBtr0330044 19139052|19139052 19141595|19141415 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3R - 19140896 19140934 3'utr Ppcs FlyBase G39682.1 TTGCCGGACGTTGTGTCCCTGGACAACTGGTGCTGTGTG 5 19140904 0.918301843 4 5 35 1 0.84509804 0.428571429 0.2 0.428571429 5 0 0 7 3R:19140896-19140934 7 5 1891 FBgn0261285 111.1666667 3.44 5.32 0.044977511 1.453488372 0.939849624 -2 -3 -2.5 0.25 dme-miR-276a-3p 6mer3-8 AGTTCC 3R 19141331 19141336 - 3R_19141331_19141336_- 0.937556803 0.909787713 0.923672258 0.019635719 Ppcs FBtr0347007|FBtr0083752|FBtr0330044 19140994|19139052|19139052 19141595|19141595|19141415 3R - 19141181 19141363 3'utr Ppcs FlyBase G52573.1 TCGATTCATCCTTGCCCTTGGACTTTGAGTTCCCGCCACAATTTAGCTATCTATTTATGGTCGCGCCTCATAATTGAGGTGGCACCGCTCCATTAGTCCATTATCCTGTTGTTATTATTATTTTGGTATTAGTTAATGTATTGGCCCTATTGTTGTCCTGAGAAATGATGTCACTTGTATGTA 90 19141334 0.823114811 24 87 740 0.953703704 1.711807229 0.175925926 0.144444444 0.287037037 90 4 1 103 3R:19141181-19141363 6 Ppcs FBtr0347007|FBtr0083752|FBtr0330044 19140994|19139052|19139052 19141595|19141595|19141415 AGTTCC 6mer3-8 dme-miR-276a-3p 3R - 19141253 19141359 3'utr Ppcs FlyBase G39684.1 TTCATCCTTGCCCTTGGACTTTGAGTTCCCGCCACAATTTAGCTATCTATTTATGGTCGCGCCTCATAATTGAGGTGGCACCGCTCCATTAGTCCATTATCCTGTTG 46 19141334 0.799076176 15 44 355 0.971428571 1.531478917 0.085714286 0.391304348 0.6 46 1 1 68 3R:19141253-19141359 6 45.5 1892 FBgn0261285 111.1666667 3.44 5.32 0.409295352 13.22674419 8.552631579 -2 -2 -2 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 19148727 19148734 - 3R_19148727_19148734_- 0.642682792 0.634937321 0.638810056 0.005476896 CG5835 FBtr0083751|FBtr0083751|FBtr0083751 19148630|19148630|19148630 19149037|19149037|19149037 3R - 19148654 19148757 3'utr CG5835 FlyBase G52579.1 AAGACCAATTAGTTAGTAAGTTTCTGTGATATTGTTCTAGAGATTCTTTTGTACGTCCTTGCACTAACAATACGCATAGAACCCACGTTGCTAATCGATAATAA 65 19148735 0.993584955 20 60 743 0.950617284 1.58546073 0.061728395 0.2 0.358024691 65 3 1 77 3R:19148654-19148757 8 CG5835 FBtr0083751|FBtr0083751|FBtr0083751 19148630|19148630|19148630 19149037|19149037|19149037 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 19148691 19148755 3'utr CG5835 FlyBase G39688.1 GACCAATTAGTTAGTAAGTTTCTGTGATATTGTTCTAGAGATTCTTTTGTACGTCCTTGCACTAA 47 19148735 0.660163736 11 42 567 0.893333333 1.348953548 0.093333333 0.468085106 0.666666667 47 6 2 67 3R:19148691-19148755 8 50.5 1893 FBgn0038682 101.3333333 9.206666667 14.04333333 0.498355263 5.485155684 3.596012343 1 1 1 0.25 dme-miR-1012-3p 6mer3-8 TTGACT 3R 19154505 19154510 - 3R_19154505_19154510_- 0.999443133 0.792011742 0.895727437 0.14667615 CG11779 FBtr0083750|FBtr0335020|FBtr0083749 19154095|19154095|19154403 19155132|19155132|19155132 3R - 19154487 19154545 3'utr CG11779 FlyBase G52582.1 ATGGAATTCGCTCAGGGCGGCTTGGGCATCGTAAATTGACTGTACACACAGAATCCAAA 7 19154509 0.980416204 4 6 42 0.888888889 0.602059991 0.444444444 0.285714286 0.444444444 7 0 1 8 3R:19154487-19154545 6 CG11779 FBtr0083749|FBtr0335020|FBtr0083750 19154403|19154095|19154095 19155132|19155132|19155132 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 19154494 19154522 3'utr CG11779 FlyBase G39690.1 GGGCATCGTAAATTGACTGTACACACAGA 6 19154503 0.903547297 3 6 29 1 1.079181246 0.666666667 0.5 0.75 6 0 0 12 3R:19154494-19154522 6 5.5 1894 FBgn0038683 227.2933333 11.68666667 17.73333333 0.024197806 0.470621791 0.310150376 -1 -7 -4 0.25 dme-miR-34-5p 7mer-m8 CACTGCC 3R 19170090 19170096 + 3R_19170090_19170096_+ 0.519375831 0.514689589 0.51703271 0.003313644 sqz FBtr0083733 19169821 19170576 3R + 19170077 19170226 3'utr sqz FlyBase G43909.1 AAATCAACTCCATCACTGCCCAAAACCAATAAGAAAATCAACTGCAATCCTACAGTTTCTGTGCTATTTTCAACTGCCATATGAAAGTAATATGTAATATCTAGATCAACTCAGGATTTTAAATACGATAATTATGCACACTTTTAGATA 321 19170089 0.807926662 22 304 1125 0.95 1.579783597 0.04 0.193146417 0.3525 321 11 9 380 3R:19170077-19170226 7 sqz FBtr0083733 19169821 19170576 CACTGCC 7mer-m8 dme-miR-34-5p 3R + 19170077 19170110 3'utr sqz FlyBase G33184.1 AAATCAACTCCATCACTGCCCAAAACCAATAAGA 155 19170089 0.796445737 3 140 378 0.916666667 1.597695186 0.00462963 0.324675325 0.518518519 154 14 4 198 3R:19170077-19170110 7 206.5 1895 FBgn0010768 210.2766667 7.726666667 11.73666667 0.982039535 26.72562554 17.5944334 1 1 1 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3R 19178150 19178156 - 3R_19178150_19178156_- 0.44278851 0.439055619 0.440922065 0.002639559 CG5555 FBtr0083746|FBtr0332165 19178083|19178083 19178257|19178257 3R - 19178093 19178177 3'utr CG5555 FlyBase G52594.1 AAGGTTTATAACAGCTCTATATGTGATTTCCTTTGTATAACGAAAACCTAAGGATTAAATATAACTACTACTACGTAGAAAACCA 142 19178150 0.98510694 12 137 1194 0.962765957 1.78055732 0.053191489 0.253521127 0.436170213 142 5 2 181 3R:19178093-19178177 7 CG5555 FBtr0083746|FBtr0332165 19178083|19178083 19178257|19178257 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 19178106 19178177 3'utr CG5555 FlyBase G39700.1 AAGGTTTATAACAGCTCTATATGTGATTTCCTTTGTATAACGAAAACCTAAGGATTAAATATAACTACTACT 114 19178150 0.860162087 13 107 926 0.936781609 1.73506635 0.040229885 0.385964912 0.597701149 114 9 2 163 3R:19178106-19178177 7 94.5 1896 FBgn0038686 438.3333333 26.99 41.29333333 0.215589354 3.501296777 2.288505005 -6 -6 -6 0.25 dme-miR-317-3p 7mer-A1 GTGTTCA 3R 19405089 19405095 + 3R_19405089_19405095_+ 0.753784987 0.472111826 0.612948406 0.19917303 CG5316 FBtr0083759 19404158 19406294 3R + 19405063 19405101 3'utr CG5316 FlyBase G43918.1 CTTTCAAATTGCGTATATGATGCTCAGTGTTCAGGGATC 11 19405080 0.814293571 3 9 80 0.846153846 1.041392685 0.384615385 0.181818182 0.307692308 11 2 0 11 3R:19405063-19405101 7 CG5316 FBtr0083759 19404158 19406294 GTGTTCA 7mer-A1 dme-miR-317-3p 3R + 19405069 19405103 3'utr CG5316 FlyBase G33193.1 AATTGCGTATATGATGCTCAGTGTTCAGGGATCCA 7 19405080 0.815865428 3 7 53 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 3R:19405069-19405103 7 9 1897 FBgn0038704 1029.49 52.37666667 80.40666667 0.008742193 0.171832241 0.111931017 9 9 9 0.25 dme-bantam-3p 6mer3-8 TGATCT 3R 19633731 19633736 - 3R_19633731_19633736_- 0.99993305 0.994132166 0.997032608 0.004101785 subdued FBtr0334922|FBtr0083806|FBtr0334921|FBtr0083805|FBtr0302492 19633416|19633416|19633416|19633416|19633416 19633928|19633928|19633928|19633928|19633928 3R - 19633668 19633756 3'utr subdued FlyBase G52653.1 ATTTAGGTAATCCAATTTTATGATCTGTTAATTGAAAATGATTTATTAAGTGGCTCAAACTTATATTTATGCAGCCCAAGTGAGTGCCA 21 19633735 0.990438205 6 21 213 1 1.361727836 0.043478261 0.095238095 0.173913043 21 0 0 23 3R:19633668-19633756 6 subdued FBtr0334922|FBtr0302492|FBtr0083805|FBtr0334921|FBtr0083806 19633416|19633416|19633416|19633416|19633416 19633928|19633928|19633928|19633928|19633928 TGATCT 6mer3-8 dme-bantam-3p 3R - 19633693 19633753 3'utr subdued FlyBase G39737.1 TAGGTAATCCAATTTTATGATCTGTTAATTGAAAATGATTTATTAAGTGGCTCAAACTTAT 15 19633736 0.988004308 7 13 134 0.96 1.380211242 0 0.466666667 0.68 15 1 0 24 3R:19633693-19633753 6 14.5 1898 FBgn0038721 940.6666667 28.25333333 43.49 0.0154146 0.51321378 0.333409979 -1 0 -0.5 0.25 dme-miR-276a-3p 6mer2-7 GTTCCT 3R 19633885 19633890 - 3R_19633885_19633890_- 0.933413282 0.810478806 0.871946044 0.086927819 subdued FBtr0334922|FBtr0083806|FBtr0334921|FBtr0083805|FBtr0302492 19633416|19633416|19633416|19633416|19633416 19633928|19633928|19633928|19633928|19633928 3R - 19633856 19633912 3'utr subdued FlyBase G52654.1 AGTGATTATTTGTGTTACGAATGTTCCTTTCAGTCACTTAATTAGGCCTTAGCTATG 38 19633891 0.753159584 6 36 336 0.979591837 1.681241237 0.469387755 0.210526316 0.387755102 38 1 0 48 3R:19633856-19633912 6 subdued FBtr0334922|FBtr0302492|FBtr0083805|FBtr0334921|FBtr0083806 19633416|19633416|19633416|19633416|19633416 19633928|19633928|19633928|19633928|19633928 GTTCCT 6mer2-7 dme-miR-276a-3p 3R - 19633842 19633922 3'utr subdued FlyBase G39738.1 AATCATTCAAAGTGATTATTTGTGTTACGAATGTTCCTTTCAGTCACTTAATTAGGCCTTAGCTATGACACTTTTATTATT 37 19633884 0.670737474 10 36 306 0.967213115 1.770852012 0.344262295 0.459459459 0.672131148 37 2 0 59 3R:19633842-19633922 6 30.5 1899 FBgn0038721 940.6666667 28.25333333 43.49 0.032423813 1.079518641 0.701310646 1 -6 -2.5 0.25 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 19643286 19643292 - 3R_19643286_19643292_- 0.661502561 0.654450273 0.657976417 0.004986729 Vha13 FBtr0083804|FBtr0346100 19643256|19643016 19643507|19643507 3R - 19643265 19643322 3'utr Vha13 FlyBase G52668.1 CACTCGCGCGGGATTGTATTATCATTGTTTTGTGTTCTGCCCAATACACGTTGTTGTT 11 19643294 0.987991914 10 11 112 1 1.113943352 0.076923077 0.181818182 0.307692308 11 0 0 13 3R:19643265-19643322 7 Vha13 FBtr0346100|FBtr0083804 19643016|19643256 19643507|19643507 TGTGTTC 7mer-m8 dme-miR-317-3p 3R - 19643273 19643321 3'utr Vha13 FlyBase G39753.1 ACTCGCGCGGGATTGTATTATCATTGTTTTGTGTTCTGCCCAATACACG 6 19643309 0.985991727 3 6 55 1 0.954242509 0.333333333 0.333333333 0.555555556 6 0 0 9 3R:19643273-19643321 7 5.5 1900 FBgn0026753 1193.436667 217.27 330.9333333 0.004608539 0.025314125 0.016619662 2 17 9.5 0.25 dme-miR-283-5p 8mer-A1 TGATATTA 3R 19698583 19698590 + 3R_19698583_19698590_+ 0.592118064 0.592187221 0.592152642 4.89E-05 Naam FBtr0335415 19698182 19698742 3R + 19698548 19698603 3'utr Naam FlyBase G43962.1 CTTAATGTTGTGCGCTGCACCTGTTTGAATCAAATTGATATTATATACAACCAACA 32 19698582 0.745180718 8 21 294 0.641025641 1.397940009 0.256410256 0.1875 0.333333333 32 14 0 25 3R:19698548-19698603 8 Naam FBtr0335415 19698182 19698742 TGATATTA 8mer-A1 dme-miR-283-5p 3R + 19698542 19698593 3'utr Naam FlyBase G33215.1 AGGGTTCTTAATGTTGTGCGCTGCACCTGTTTGAATCAAATTGATATTATAT 19 19698573 0.96710979 6 12 191 0.535714286 0.875061263 0.035714286 0.263157895 0.5 19 12 1 15 3R:19698542-19698593 8 24 1901 FBgn0051216 617.35 42.02 64.22 0.03887584 0.571156592 0.373715353 1 10 5.5 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 19698675 19698682 + 3R_19698675_19698682_+ 0.462021356 0.378010917 0.420016136 0.059404394 Naam FBtr0335415 19698182 19698742 3R + 19698652 19698701 3'utr Naam FlyBase G43963.1 TGCTTCAGTGAGAAATATTGTATGTACTTAAAAATGTTCAAATAAAAGTA 11 19698674 0.982829168 3 11 87 1 1.146128036 0.357142857 0.272727273 0.428571429 11 0 0 14 3R:19698652-19698701 8 Naam FBtr0335415 19698182 19698742 GTACTTAA 8mer-A1 dme-miR-252-5p 3R + 19698643 19698691 3'utr Naam FlyBase G33216.1 TAGAACAACTGCTTCAGTGAGAAATATTGTATGTACTTAAAAATGTTCA 6 19698674 0.984116513 2 6 44 1 0.903089987 0.25 0.166666667 0.375 6 0 0 8 3R:19698643-19698691 8 7.5 1902 FBgn0051216 617.35 42.02 64.22 0.0121487 0.178486435 0.116786048 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 19854208 19854215 - 3R_19854208_19854215_- 0.622143058 0.620921909 0.621532484 0.000863519 Ire1 FBtr0113248|FBtr0113248|FBtr0113248 19853906|19853906|19853906 19854439|19854439|19854439 3R - 19854037 19854369 3'utr Ire1 FlyBase G52691.1 TTAATCGTGCAATTTGTGTATATGCAACTATTCCAAAATGATTCCCAATTCAGTTCTTAGCAAAAATATTCAACGGTAAGTAAACAAATGAAACTATTTTGTATACCAAGTAAGAATAATGTAGTGTGTCTTCTGTCGAATGCACGGAATTTAACTGTGATAATTTTTGATTTTGTTCAATGCCCAAGTGCAAGTTGATCTAGACAAATAGTTCGAGTTTTATATATAGTACCTAGACTTATTGTATATTTATGCATTAGTTAAGACACACCTACCTATCCCAACACTCCTCCCATTCGTGGAGATCCTTGACAAGCGAAGTTTTTAGTTTTT 873 19854219 0.834446738 64 805 6870 0.922800718 1.898049762 0.31508079 0.213058419 0.383303411 873 74 12 1028 3R:19854037-19854369 8 Ire1 FBtr0113248|FBtr0113248|FBtr0113248 19853906|19853906|19853906 19854439|19854439|19854439 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 19854032 19854368 3'utr Ire1 FlyBase G39769.1 TAATCGTGCAATTTGTGTATATGCAACTATTCCAAAATGATTCCCAATTCAGTTCTTAGCAAAAATATTCAACGGTAAGTAAACAAATGAAACTATTTTGTATACCAAGTAAGAATAATGTAGTGTGTCTTCTGTCGAATGCACGGAATTTAACTGTGATAATTTTTGATTTTGTTCAATGCCCAAGTGCAAGTTGATCTAGACAAATAGTTCGAGTTTTATATATAGTACCTAGACTTATTGTATATTTATGCATTAGTTAAGACACACCTACCTATCCCAACACTCCTCCCATTCGTGGAGATCCTTGACAAGCGAAGTTTTTAGTTTTTATATC 625 19854219 0.942288322 59 570 4917 0.919732441 1.962211439 0.275362319 0.3248 0.529542921 625 64 8 825 3R:19854032-19854368 8 416.5 1903 FBgn0261984 824.9233333 24.51333333 37.36 0.504895404 16.99075333 11.14828694 4 4 4 0.25 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 19899195 19899202 - 3R_19899195_19899202_- 0.354957218 0.292940725 0.323948971 0.043852288 CG4538 FBtr0083855|FBtr0344261|FBtr0344262 19898827|19897370|19898542 19899595|19899291|19899595 3R - 19899155 19899230 3'utr CG4538 FlyBase G52721.1 AAAGAATGTCCTCAATCCCCAAATGCATCTGTGATTCATAAACGACGAGCAGCGCAGTCTTTTGAGCCCGAAGCAA 37 19899203 0.982723831 6 34 252 0.926829268 1.278753601 0.097560976 0.108108108 0.195121951 37 2 1 38 3R:19899155-19899230 8 CG4538 FBtr0344262|FBtr0083855|FBtr0344261 19898542|19898827|19897370 19899595|19899595|19899291 CTGTGATT 8mer-m1 dme-miR-308-3p 3R - 19899189 19899225 3'utr CG4538 FlyBase G39789.1 ATGTCCTCAATCCCCAAATGCATCTGTGATTCATAAA 22 19899203 0.802509403 2 19 147 0.878787879 1.161368002 0 0.363636364 0.575757576 22 3 1 29 3R:19899189-19899225 8 27 1904 FBgn0038745 776.53 28.94666667 44.57666667 0.034770067 0.932749885 0.605698048 1 1 1 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3R 19913530 19913536 + 3R_19913530_19913536_+ 0.514747839 0.52119416 0.517970999 0.004558293 RhoGAP92B FBtr0344352|FBtr0344351|FBtr0344353|FBtr0344354|FBtr0083821 19913083|19913083|19913083|19913083|19913083 19913730|19913730|19913730|19914272|19913730 3R + 19913341 19913548 3'utr RhoGAP92B FlyBase G44025.1 ATGTATGCATATATAGTCTTTAGTAGGCCACCATAAATCAATTGTCGAAATTCGATTTGTTAGCCCAAGCCAGCTCTCAATTGTTAATCCTTGTTTGAAAGGTTGTGATACTTCAGAAAGGTTTTGTGTTTCCTTAATTTTTTGCATTGCTCTTGAGTACGTTTTGTTAACTTCTCCAACGAAAGACATTGTGATTTCCTTTTATTAA 185 19913536 0.70833306 33 172 1511 0.934782609 1.48734042 0.156521739 0.183783784 0.343478261 185 9 6 215 3R:19913341-19913548 7 RhoGAP92B FBtr0344352|FBtr0083821|FBtr0344354|FBtr0344353|FBtr0344351 19913083|19913083|19913083|19913083|19913083 19913730|19913730|19914272|19913730|19913730 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 19913476 19913552 3'utr RhoGAP92B FlyBase G33265.2 AATTTTTTGCATTGCTCTTGAGTACGTTTTGTTAACTTCTCCAACGAAAGACATTGTGATTTCCTTTTATTAAAAGT 62 19913530 0.793786307 10 58 489 0.98 1.991226076 0.03 0.370967742 0.61 62 2 0 98 3R:19913476-19913552 7 65.5 1905 FBgn0038747 1846.786667 74.18 113.18 0.035467009 0.882987328 0.578724156 -6 0 -3 0.25 dme-miR-970-3p 8mer-A1 TCTTATGA 3R 19913878 19913885 + 3R_19913878_19913885_+ 0.627048013 0.613722008 0.62038501 0.009422905 RhoGAP92B FBtr0344354 19913083 19914272 3R + 19913850 19913890 3'utr RhoGAP92B FlyBase G44028.1 GCGCGTAGTGTATGTTAGAATGTGGATCTCTTATGAAATTG 11 19913880 0.864861084 3 11 93 1 1.079181246 0.333333333 0.090909091 0.166666667 11 0 0 12 3R:19913850-19913890 8 RhoGAP92B FBtr0344354 19913083 19914272 TCTTATGA 8mer-A1 dme-miR-970-3p 3R + 19913856 19913884 3'utr RhoGAP92B FlyBase G33268.1 AGTGTATGTTAGAATGTGGATCTCTTATG 6 19913880 0.70697278 3 6 55 1 1.041392685 0.454545455 0.666666667 0.818181818 6 0 0 11 3R:19913856-19913884 7 8.5 1906 FBgn0038747 1846.786667 74.18 113.18 0.004602589 0.114586142 0.075101608 -2 -2 -2 0.25 dme-miR-932-5p 6mer2-7 GAATTG 3R 20301533 20301538 + 3R_20301533_20301538_+ 0.906629869 0.759970838 0.833300354 0.103703644 cic FBtr0334305 20300626 20303942 3R + 20301442 20301549 3'utr cic FlyBase G44096.1 CGCACATCTACAAGCGCTTTTAAACTGTTTGCTTTTGTTCTCAAAGTTTATGCAACACGCGAACCTTTTTAAATTGTATGTACATTTCCTTGAATTGGCTTTTTACAC 18 20301510 0.986352539 12 16 139 0.947368421 1.255272505 0.368421053 0.055555556 0.105263158 18 1 0 18 3R:20301442-20301549 6 cic FBtr0334305 20300626 20303942 GAATTG 6mer2-7 dme-miR-932-5p 3R + 20301418 20301562 3'utr cic FlyBase G33315.1 AAAACCCCCAAACTAACACCCAATCGCACATCTACAAGCGCTTTTAAACTGTTTGCTTTTGTTCTCAAAGTTTATGCAACACGCGAACCTTTTTAAATTGTATGTACATTTCCTTGAATTGGCTTTTTACACTGTTGTCTAATTG 18 20301536 0.98932963 11 16 162 1 1.361727836 0.086956522 0.277777778 0.434782609 18 0 0 23 3R:20301418-20301562 6 6.5 1907 FBgn0262582 2700.526667 30.66 46.83666667 0.002406938 0.212002609 0.138780158 23 -3 10 0.25 dme-miR-7-5p 8mer-A1 GTCTTCCA 3R 20301716 20301723 + 3R_20301716_20301723_+ 0.674989596 0.675014418 0.675002007 1.75E-05 cic FBtr0334305 20300626 20303942 3R + 20301608 20301738 3'utr cic FlyBase G44097.1 TAAATTGTAAACATACCGAAAAATAAACTCTAAAAAGAAAATAATTCAAAAAACTTATTACCGACGATTGAAAGAATACAAACCAGAGAGAGAATGAGAGAACTAACTGTCTTCCACTGTTGCTGCAATAT 384 20301702 0.928908577 21 359 1960 0.939953811 1.831443159 0.233256351 0.1171875 0.217090069 384 21 5 407 3R:20301608-20301738 8 cic FBtr0334305 20300626 20303942 GTCTTCCA 8mer-A1 dme-miR-7-5p 3R + 20301647 20301850 3'utr cic FlyBase G33316.1 AATAATTCAAAAAACTTATTACCGACGATTGAAAGAATACAAACCAGAGAGAGAATGAGAGAACTAACTGTCTTCCACTGTTGCTGCAATATACTATTTAATATTGTTTACCATTTCGGTTCGATTAAATTTAGTTGTAAATTAATGTTTTAAGTATGGACTGCATTTTATTCATATGCAAAATTCTGTTCATTGTGAGTTGTT 221 20301702 0.9341476 31 208 1341 0.93993994 1.893484346 0.243243243 0.371040724 0.582582583 221 17 3 313 3R:20301647-20301850 8 231 1908 FBgn0262582 2700.526667 30.66 46.83666667 0.08553887 7.534246575 4.932033307 14 14 14 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 3R 20325438 20325443 - 3R_20325438_20325443_- 0.593881545 0.625713128 0.609797337 0.02250834 CG4360 FBtr0083899|FBtr0113252 20324272|20324272 20325628|20326217 3R - 20325408 20325465 3'utr CG4360 FlyBase G52777.1 ATATATACTCGAAAGTGTTATTTACCTGCTGTGCAGAGCGCAATTGTATGTAACTATA 54 20325445 0.975460906 7 52 445 0.984126984 1.792391689 0.253968254 0.148148148 0.26984127 54 1 0 62 3R:20325408-20325465 6 CG4360 FBtr0083899|FBtr0113252 20324272|20324272 20325628|20326217 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 3R - 20325304 20325580 3'utr CG4360 FlyBase G39829.1 AGCCAGCCAGTCAAGCAGCCATTGAGGAATAGTGCAATATGCATGCCACATAGCACATACACTTATAGATCGCATATACGGCATACGAATACGATTACATGAATACTATATTTGAATATATACTCGAAAGTGTTATTTACCTGCTGTGCAGAGCGCAATTGTATGTAACTATATCGTAGAGAGCTGATCCACATGCGTGTCCAATTGTAAATTAAGGCTAGCCGTGTTGGCATAAGCCACAGATGATATGATACAGGGTGTTTAGGCCTAAACTCTA 96 20325445 0.980148801 29 92 635 0.95890411 1.669006781 0.226027397 0.427083333 0.623287671 96 4 2 140 3R:20325304-20325580 6 49 1909 FBgn0038787 2517.203333 86.49333333 132.24 0.019466048 0.566517651 0.370538415 2 2 2 0.25 dme-miR-276a-3p 6mer2-7 GTTCCT 3R 20325694 20325699 - 3R_20325694_20325699_- 0.997097001 0.978573714 0.987835358 0.013097951 CG4360 FBtr0113252 20324272 20326217 3R - 20325674 20325719 3'utr CG4360 FlyBase G52779.1 CGGTGAAAAGCCCTACAACTGTTCCTTTTGTCCTAAACAGTTCCGG 15 20325699 0.979081807 6 13 126 0.882352941 0.698970004 0 0.133333333 0.235294118 15 0 2 15 3R:20325674-20325719 6 CG4360 FBtr0113252 20324272 20326217 GTTCCT 6mer2-7 dme-miR-276a-3p 3R - 20325673 20325711 3'utr CG4360 FlyBase G39830.1 AGCCCTACAACTGTTCCTTTTGTCCTAAACAGTTCCGGC 6 20325695 0.984407809 4 5 43 0.888888889 0.903089987 0 0.5 0.666666667 6 1 0 8 3R:20325673-20325711 6 10.5 1910 FBgn0038787 2517.203333 86.49333333 132.24 0.004171296 0.121396639 0.079401089 0 -4 -2 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 20325771 20325776 - 3R_20325771_20325776_- 0.744013718 0.631278197 0.687645958 0.079716037 CG4360 FBtr0113252|FBtr0113252|FBtr0113252 20324272|20324272|20324272 20326217|20326217|20326217 3R - 20325742 20325795 3'utr CG4360 FlyBase G52780.1 AGCCCTACAAGTGCAAGATCTGTGAGGTCAACTTCCGGCAGGTGGCCACGCTGA 12 20325777 0.912384647 6 12 62 1 1.146128036 0 0.166666667 0.285714286 12 0 0 14 3R:20325742-20325795 6 CG4360 FBtr0113252|FBtr0113252|FBtr0113252 20324272|20324272|20324272 20326217|20326217|20326217 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 20325748 20325795 3'utr CG4360 FlyBase G39831.1 AGCCCTACAAGTGCAAGATCTGTGAGGTCAACTTCCGGCAGGTGGCCA 8 20325777 0.910315001 3 8 41 1 1.113943352 0.307692308 0.375 0.615384615 8 0 0 13 3R:20325748-20325795 6 10 1911 FBgn0038787 2517.203333 86.49333333 132.24 0.003972663 0.115615847 0.075620085 1 1 1 0.25 dme-miR-932-5p 6mer2-7 GAATTG 3R 20536017 20536022 - 3R_20536017_20536022_- 0.799510942 0.816203319 0.807857131 0.011803309 Stat92E FBtr0334584|FBtr0089486|FBtr0089485|FBtr0089487|FBtr0100457|FBtr0334582|FBtr0334586|FBtr0334581|FBtr0334583|FBtr0089484 20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535321|20535691|20535691 20537408|20537408|20537408|20537408|20537408|20538528|20537408|20537408|20537408|20537408 3R - 20535953 20536115 3'utr Stat92E FlyBase G52795.1 AAGCCTATGTTAAACGAAAGTGGAAAAACAATCAACGAGAGCAGCAACGCAGGGATTGATTGCTTTAATTTTAGTTATAATCTAAGTAAGATTGAATTGCTTTATGTAACCCCATCCTTTATTGGCTTCCAATGCTGAAAATGCGCAAAAATTTGAACTAATC 60 20536020 0.999984639 18 58 474 0.97260274 1.550228353 0.232876712 0.166666667 0.315068493 60 1 1 71 3R:20535953-20536115 6 Stat92E FBtr0100457|FBtr0089487|FBtr0334581|FBtr0089485|FBtr0334584|FBtr0089486|FBtr0089484|FBtr0334583|FBtr0334586|FBtr0334582 20535691|20535691|20535321|20535691|20535691|20535691|20535691|20535691|20535691|20535691 20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20538528 GAATTG 6mer2-7 dme-miR-932-5p 3R - 20535934 20536066 3'utr Stat92E FlyBase G39846.1 CAGGGATTGATTGCTTTAATTTTAGTTATAATCTAAGTAAGATTGAATTGCTTTATGTAACCCCATCCTTTATTGGCTTCCAATGCTGAAAATGCGCAAAAATTTGAACTAATCAATGTATATTTTTTTGAAA 44 20536020 0.986791595 20 42 366 0.966101695 1.45484486 0.084745763 0.272727273 0.457627119 44 1 1 57 3R:20535934-20536066 6 28.5 1912 FBgn0016917 6780.14 209.8333333 320.8166667 0.004203453 0.135822081 0.088835784 -2 -2 -2 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 20536257 20536262 - 3R_20536257_20536262_- 0.997000751 0.951739816 0.974370284 0.03200436 Stat92E FBtr0334584|FBtr0334584|FBtr0334584|FBtr0089486|FBtr0089486|FBtr0089486|FBtr0089485|FBtr0089485|FBtr0089485|FBtr0089487|FBtr0089487|FBtr0089487|FBtr0100457|FBtr0100457|FBtr0100457|FBtr0334582|FBtr0334582|FBtr0334582|FBtr0334586|FBtr0334586|FBtr0334586|FBtr0334581|FBtr0334581|FBtr0334581|FBtr0334583|FBtr0334583|FBtr0334583|FBtr0089484|FBtr0089484|FBtr0089484 20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535321|20535321|20535321|20535691|20535691|20535691|20535691|20535691|20535691 20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20538528|20538528|20538528|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408 3R - 20536129 20536314 3'utr Stat92E FlyBase G52796.1 CTTTTATATATGTATACATATGATTTCAATTTGTGCACTATGACGTGTTCGTCTGTGACAAAGCATTACGTTTAGATGATACTGACAAAATAATCGGTTTAGTTAGTGAGTAACTATTTGTTGAATCTAAATTTTTGATTTTGATTTTAATTTTATGGCCTAATTTTAAAACTTTGATATACAATT 276 20536263 0.855399416 35 263 2215 0.953216374 2.212187604 0.266081871 0.202898551 0.356725146 276 15 1 326 3R:20536129-20536314 6 Stat92E FBtr0100457|FBtr0100457|FBtr0100457|FBtr0089487|FBtr0089487|FBtr0089487|FBtr0334581|FBtr0334581|FBtr0334581|FBtr0089485|FBtr0089485|FBtr0089485|FBtr0334584|FBtr0334584|FBtr0334584|FBtr0089486|FBtr0089486|FBtr0089486|FBtr0089484|FBtr0089484|FBtr0089484|FBtr0334583|FBtr0334583|FBtr0334583|FBtr0334586|FBtr0334586|FBtr0334586|FBtr0334582|FBtr0334582|FBtr0334582 20535691|20535691|20535691|20535691|20535691|20535691|20535321|20535321|20535321|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535691 20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20538528|20538528|20538528 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 20536200 20536313 3'utr Stat92E FlyBase G39849.1 TTTTATATATGTATACATATGATTTCAATTTGTGCACTATGACGTGTTCGTCTGTGACAAAGCATTACGTTTAGATGATACTGACAAAATAATCGGTTTAGTTAGTGAGTAACT 150 20536263 0.812100701 24 142 1134 0.935779817 1.832508913 0.23853211 0.36 0.559633028 150 12 2 204 3R:20536200-20536313 6 127.5 1913 FBgn0016917 6780.14 209.8333333 320.8166667 0.018804921 0.607625099 0.397423243 1 1 1 0.25 dme-miR-970-3p 6mer2-7 CTTATG 3R 20536388 20536393 - 3R_20536388_20536393_- 0.50539236 0.543075928 0.524234144 0.026646258 Stat92E FBtr0334584|FBtr0089486|FBtr0089485|FBtr0089487|FBtr0100457|FBtr0334582|FBtr0334586|FBtr0334581|FBtr0334583|FBtr0089484 20535691|20535691|20535691|20535691|20535691|20535691|20535691|20535321|20535691|20535691 20537408|20537408|20537408|20537408|20537408|20538528|20537408|20537408|20537408|20537408 3R - 20536333 20536516 3'utr Stat92E FlyBase G52797.1 AACATCAACATCAATAAGATCTAGCCGATCAATGCATGCAAATTGAGCACCTCAACACAAACACCTTCAGCTCACAGCCAGAACATTGTCTATATAATATATCGTGATTATGATTGTGTCTGACTTATGCAAAATTTAGAATTTCTGTGTTGTATAAACCTTTGGAATGTGTCCGCACGTTGTT 128 20536407 0.84850031 40 123 1037 0.95 2.181843588 0.13125 0.1796875 0.34375 128 8 0 152 3R:20536333-20536516 6 Stat92E FBtr0100457|FBtr0089487|FBtr0334581|FBtr0089485|FBtr0334584|FBtr0089486|FBtr0089484|FBtr0334583|FBtr0334586|FBtr0334582 20535691|20535691|20535321|20535691|20535691|20535691|20535691|20535691|20535691|20535691 20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20537408|20538528 CTTATG 6mer2-7 dme-miR-970-3p 3R - 20536335 20536501 3'utr Stat92E FlyBase G39850.1 AAGATCTAGCCGATCAATGCATGCAAATTGAGCACCTCAACACAAACACCTTCAGCTCACAGCCAGAACATTGTCTATATAATATATCGTGATTATGATTGTGTCTGACTTATGCAAAATTTAGAATTTCTGTGTTGTATAAACCTTTGGAATGTGTCCGCACGTTG 78 20536405 0.987633102 28 76 679 0.966386555 2.06069784 0.243697479 0.384615385 0.596638655 78 4 0 115 3R:20536335-20536501 6 29.5 1914 FBgn0016917 6780.14 209.8333333 320.8166667 0.004350943 0.140587768 0.091952829 14 12 13 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 20581843 20581849 - 3R_20581843_20581849_- 0.655338389 0.735089691 0.69521404 0.056392685 CG16953 FBtr0300803|FBtr0300803|FBtr0300803 20581768|20581768|20581768 20582499|20582499|20582499 3R - 20581815 20581885 3'utr CG16953 FlyBase G52839.1 CATCACACACTTAACACGCGCGACACAAATATTCATTGTGATAGAAATAGAACAAACAGTATGTACGTTTA 98 20581850 0.684349813 9 86 609 0.868421053 1.393575203 0.289473684 0.12244898 0.245614035 98 12 3 99 3R:20581815-20581885 7 CG16953 FBtr0300803|FBtr0300803|FBtr0300803 20581768|20581768|20581768 20582499|20582499|20582499 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 20581779 20581877 3'utr CG16953 FlyBase G39887.1 ACTTAACACGCGCGACACAAATATTCATTGTGATAGAAATAGAACAAACAGTATGTACGTTTACTAAAACGAAAAGTTTGAAGAAAACCCGTATACTTA 47 20581850 0.801804783 10 44 305 0.953846154 1.315270435 0.184615385 0.319148936 0.507692308 47 1 2 62 3R:20581779-20581877 7 67 1915 FBgn0038809 1215.62 52.09333333 79.63 0.055115908 1.286153059 0.841391435 1 1 1 0.25 dme-miR-14-3p 7mer-m8 AAGACTG 3R 20582041 20582047 - 3R_20582041_20582047_- 0.668890212 0.668415781 0.668652996 0.000335451 CG16953 FBtr0300803 20581768 20582499 3R - 20582004 20582158 3'utr CG16953 FlyBase G52841.1 ACGCACACACTTGCTCATCGATGGCCAAAATGTGGAGTAACAAGCATCCATTGGACCGCAATCAGTTCCAGGATTTGGGAACGCAACTGCAGATCCCTTTGGATATTGATAAAGACTGTCTTTGTTCTAAAAGCAAAAGTAAATCTGGTTAAAAA 84 20582050 0.905696364 22 80 529 0.958762887 1.968482949 0.092783505 0.119047619 0.237113402 84 4 0 93 3R:20582004-20582158 7 CG16953 FBtr0300803 20581768 20582499 AAGACTG 7mer-m8 dme-miR-14-3p 3R - 20582025 20582096 3'utr CG16953 FlyBase G39889.1 CAGTTCCAGGATTTGGGAACGCAACTGCAGATCCCTTTGGATATTGATAAAGACTGTCTTTGTTCTAAAAGC 27 20582050 0.908371874 10 24 224 0.928571429 1.290034611 0.238095238 0.333333333 0.571428571 27 2 1 39 3R:20582025-20582096 7 25 1916 FBgn0038809 1215.62 52.09333333 79.63 0.020565637 0.479907858 0.313952028 3 3 3 0.25 dme-miR-8-3p 6mer2-7 AGTATT 3R 20586141 20586146 - 3R_20586141_20586146_- 0.713843813 0.999907872 0.856875843 0.202277865 2-Sep FBtr0334579|FBtr0083945 20586127|20586127 20586345|20586345 3R - 20586131 20586210 3'utr 2-Sep FlyBase G52853.1 TACACGCATATGTACGCAGGCATATAATGATTATGTATTTACAACTAACGAATAAATCGAACTTAGTATTTTAACAAAGT 19 20586140 0.757763503 10 19 129 1 1.397940009 0.04 0.315789474 0.48 19 0 0 25 3R:20586131-20586210 6 2-Sep FBtr0334579|FBtr0083945 20586127|20586127 20586345|20586345 AGTATT 6mer2-7 dme-miR-8-3p 3R - 20586135 20586170 3'utr 2-Sep FlyBase G39899.1 ACAACTAACGAATAAATCGAACTTAGTATTTTAACA 6 20586140 0.976731561 2 6 46 1 1 0.2 0.666666667 0.8 6 0 0 10 3R:20586135-20586170 6 8 1917 FBgn0014029 1104 83.25 126.7633333 0.007246377 0.096096096 0.063109732 -6 -6 -6 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 20611535 20611541 + 3R_20611535_20611541_+ 0.796196642 0.798547184 0.797371913 0.001662125 bon FBtr0334639|FBtr0334639|FBtr0334639|FBtr0334637|FBtr0334637|FBtr0334637|FBtr0330043|FBtr0330043|FBtr0330043|FBtr0300617|FBtr0300617|FBtr0300617|FBtr0334638|FBtr0334638|FBtr0334638|FBtr0083912|FBtr0083912|FBtr0083912 20610835|20610835|20610835|20610835|20610835|20610835|20611057|20611057|20611057|20610835|20610835|20610835|20610835|20610835|20610835|20610835|20610835|20610835 20612540|20612540|20612540|20612540|20612540|20612540|20612540|20612540|20612540|20611624|20611624|20611624|20612540|20612540|20612540|20612540|20612540|20612540 3R + 20611448 20611553 3'utr bon FlyBase G44186.1 CGAGTGAAATTGACATCCTTGTTTCACCGATTTGTGTTTGGGATGGAACCCGTTCTAACCAATCTTTGTTGGAATTGTATTTACTTTTGTGATAGCGAAAAACAAT 89 20611533 0.988943185 18 82 774 0.914529915 1.330413773 0.179487179 0.213483146 0.401709402 89 6 4 107 3R:20611448-20611553 7 bon FBtr0334638|FBtr0334638|FBtr0334638|FBtr0083912|FBtr0083912|FBtr0083912|FBtr0330043|FBtr0330043|FBtr0330043|FBtr0300617|FBtr0300617|FBtr0300617|FBtr0334639|FBtr0334639|FBtr0334639|FBtr0334637|FBtr0334637|FBtr0334637 20610835|20610835|20610835|20610835|20610835|20610835|20611057|20611057|20611057|20610835|20610835|20610835|20610835|20610835|20610835|20610835|20610835|20610835 20612540|20612540|20612540|20612540|20612540|20612540|20612540|20612540|20612540|20611624|20611624|20611624|20612540|20612540|20612540|20612540|20612540|20612540 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 20611514 20611577 3'utr bon FlyBase G33387.2 TGTTGGAATTGTATTTACTTTTGTGATAGCGAAAAACAATAAGATGAACAAATTACCGTTTATT 54 20611533 0.797691555 12 49 448 0.905405405 1.224014811 0.189189189 0.296296296 0.486486486 54 4 3 67 3R:20611514-20611577 7 49.5 1918 FBgn0023097 953.03 20.03333333 30.79333333 0.051939603 2.470881864 1.607490799 2 2 2 0.25 dme-miR-305-3p 6mer3-8 ATGTGC 3R 20611711 20611716 + 3R_20611711_20611716_+ 0.571250228 0.809775719 0.690512974 0.168662999 bon FBtr0334639|FBtr0334637|FBtr0330043|FBtr0334638|FBtr0083912 20610835|20610835|20611057|20610835|20610835 20612540|20612540|20612540|20612540|20612540 3R + 20611600 20611735 3'utr bon FlyBase G44188.1 AAATTAAACAATGTGGCAAAGTTCTACCATCATTTCGAATTTGACATGTACGATATTTATTGACTATTGACCGCTAACCCCATCCATCGGTAGAATCTAATTAGGACGCTCATGTGCAGCTCCCTAAGCTCCTAAG 24 20611712 0.976847418 12 23 149 0.958333333 1.06069784 0.291666667 0 0 24 0 1 23 3R:20611600-20611735 6 bon FBtr0334638|FBtr0083912|FBtr0330043|FBtr0334639|FBtr0334637 20610835|20610835|20611057|20610835|20610835 20612540|20612540|20612540|20612540|20612540 ATGTGC 6mer3-8 dme-miR-305-3p 3R + 20611651 20611728 3'utr bon FlyBase G33388.1 GATATTTATTGACTATTGACCGCTAACCCCATCCATCGGTAGAATCTAATTAGGACGCTCATGTGCAGCTCCCTAAGC 15 20611711 0.702053639 7 12 84 0.833333333 1.301029996 0.125 0.4 0.625 15 4 0 20 3R:20611651-20611728 6 7.5 1919 FBgn0023097 953.03 20.03333333 30.79333333 0.007869637 0.37437604 0.243559212 -1 0 -0.5 0.25 dme-miR-1002-5p 7mer-m8 CTACTTA 3R 20612493 20612499 + 3R_20612493_20612499_+ 0.387537896 0.433834058 0.410685977 0.032736357 bon FBtr0334639|FBtr0334637|FBtr0330043|FBtr0334638|FBtr0083912 20610835|20610835|20611057|20610835|20610835 20612540|20612540|20612540|20612540|20612540 3R + 20612455 20612514 3'utr bon FlyBase G44191.1 TTACGATAACTAAAGATTAACCACTGTATATGAATGTACTACTTACTATCGAGTGGATTA 110 20612489 0.987030846 7 109 960 0.992592593 1.826074803 0.096296296 0.190909091 0.340740741 110 0 1 134 3R:20612455-20612514 7 bon FBtr0334638|FBtr0083912|FBtr0330043|FBtr0334639|FBtr0334637 20610835|20610835|20611057|20610835|20610835 20612540|20612540|20612540|20612540|20612540 CTACTTA 7mer-m8 dme-miR-1002-5p 3R + 20612421 20612513 3'utr bon FlyBase G33393.1 ATGGAAATTATTTTATCTGTTTTAGCCGTAAGTTTTACGATAACTAAAGATTAACCACTGTATATGAATGTACTACTTACTATCGAGTGGATT 43 20612489 0.98762028 7 43 390 1 1.806179974 0.109375 0.372093023 0.578125 43 0 0 64 3R:20612421-20612513 7 74.5 1920 FBgn0023097 953.03 20.03333333 30.79333333 0.078171726 3.718801997 2.419354839 4 4 4 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 20620700 20620707 + 3R_20620700_20620707_+ 0.464343037 0.438200285 0.451271661 0.01848568 CG5466 FBtr0083913|FBtr0083913|FBtr0083913 20620354|20620354|20620354 20621269|20621269|20621269 3R + 20620673 20620724 3'utr CG5466 FlyBase G44194.1 AAATTAGTTAAACAATTGGCAAAACGTCTGTGATATTTGAATTATGTTGGCA 162 20620699 0.870506695 8 154 1270 0.955665025 1.685741739 0.463054187 0.228395062 0.384236453 162 6 3 194 3R:20620673-20620724 8 CG5466 FBtr0083913|FBtr0083913|FBtr0083913 20620354|20620354|20620354 20621269|20621269|20621269 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 20620669 20620719 3'utr CG5466 FlyBase G33395.1 CGGCAAATTAGTTAAACAATTGGCAAAACGTCTGTGATATTTGAATTATGT 114 20620699 0.849975028 9 107 857 0.943037975 1.474216264 0.525316456 0.289473684 0.487341772 114 5 4 149 3R:20620669-20620719 8 136 1921 FBgn0038815 41.00333333 1.706666667 2.616666667 3.316803512 79.6875 51.97452229 1 1 1 0.25 dme-miR-14-3p 7mer-A1 AGACTGA 3R 20627229 20627235 + 3R_20627229_20627235_+ 0.823161885 0.82230098 0.822731432 0.000608748 H FBtr0083914|FBtr0083916|FBtr0083917|FBtr0083915 20626787|20626787|20626787|20626787 20628915|20627251|20628915|20627251 3R + 20627212 20627251 3'utr H FlyBase G44217.1 AAACATTTCCTTGAAACAGACTGAACCTGAATTTTTTTAG 14 20627220 0.790730145 4 12 91 0.857142857 1.079181246 0.071428571 0 0 14 2 0 12 3R:20627212-20627251 7 H FBtr0083916|FBtr0083914|FBtr0083915|FBtr0083917 20626787|20626787|20626787|20626787 20627251|20628915|20627251|20628915 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 20627216 20627246 3'utr H FlyBase G33409.1 ATTTCCTTGAAACAGACTGAACCTGAATTTT 15 20627233 0.804078651 5 14 79 0.956521739 1.342422681 0.086956522 0.4 0.608695652 15 1 0 22 3R:20627216-20627246 7 14.5 1922 FBgn0001169 717.03 17.48666667 26.88666667 0.020222306 0.829203202 0.539300769 9 -4 2.5 0.25 dme-miR-317-5p 6mer3-8 GTATCC 3R 20629292 20629297 - 3R_20629292_20629297_- 0.974303502 0.946985759 0.96064463 0.019316531 Pi3K92E FBtr0083941|FBtr0083940|FBtr0334643 20628970|20628970|20628970 20629746|20629746|20629746 3R - 20629260 20629359 3'utr Pi3K92E FlyBase G52869.1 ATTCATTTGTTGTTTGAACACCCCCCCGCACATGCACATTGGCGCATGAACGTGCAAAAATTGTATCCTATTATGCTATATTAATTTAAGAGACATTAAC 92 20629298 0.986139433 13 90 754 0.983193277 2.068185862 0.529411765 0.260869565 0.428571429 92 2 0 117 3R:20629260-20629359 6 Pi3K92E FBtr0334643|FBtr0083940|FBtr0083941 20628970|20628970|20628970 20629746|20629746|20629746 GTATCC 6mer3-8 dme-miR-317-5p 3R - 20629268 20629346 3'utr Pi3K92E FlyBase G39914.1 TTGAACACCCCCCCGCACATGCACATTGGCGCATGAACGTGCAAAAATTGTATCCTATTATGCTATATTAATTTAAGAG 41 20629298 0.988292215 9 36 333 0.878787879 1.286306739 0.424242424 0.414634146 0.636363636 41 6 2 58 3R:20629268-20629346 6 57.5 1923 FBgn0015279 1152.983333 31.04666667 47.44333333 0.049870625 1.852050676 1.211972177 1 1 1 0.25 dme-miR-970-3p 6mer3-8 TCTTAT 3R 20629400 20629405 - 3R_20629400_20629405_- 0.877349269 0.988164235 0.932756752 0.078357967 Pi3K92E FBtr0083941|FBtr0083940|FBtr0334643 20628970|20628970|20628970 20629746|20629746|20629746 3R - 20629364 20629413 3'utr Pi3K92E FlyBase G52870.1 CCGCCCCCTCTTATACAGTGATTTTTGATCCTAAAAATTGTTTTGTTGTC 7 20629400 0.990739511 4 7 74 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 3R:20629364-20629413 6 Pi3K92E FBtr0334643|FBtr0083940|FBtr0083941 20628970|20628970|20628970 20629746|20629746|20629746 TCTTAT 6mer3-8 dme-miR-970-3p 3R - 20629375 20629437 3'utr Pi3K92E FlyBase G39915.1 TTGTAACTGTAATCATTTATCGCCCCGCCCCCTCTTATACAGTGATTTTTGATCCTAAAAATT 9 20629390 0.983713444 6 8 69 1 1.041392685 0.272727273 0.222222222 0.363636364 9 0 0 11 3R:20629375-20629437 6 6 1924 FBgn0015279 1152.983333 31.04666667 47.44333333 0.005203891 0.193257462 0.126466662 -5 -15 -10 0.25 dme-bantam-3p 7mer-A1 GATCTCA 3R 20644139 20644145 + 3R_20644139_20644145_+ 0.823319922 0.823144579 0.82323225 0.000123956 Lrrk FBtr0334641|FBtr0334640|FBtr0112788 20644133|20644133|20644133 20644279|20644279|20644279 3R + 20644091 20644157 stop_codon Lrrk FlyBase G44228.1 ATCACATTCATTGCCTGCTGTGGCGCGCCAAGCACTGGACCTAAATTCGATCTCATTCAAAATATTT 52 20644136 0.698673896 10 50 359 0.966101695 1.755874856 0.084745763 0.115384615 0.220338983 52 2 0 57 3R:20644091-20644157 7 Lrrk FBtr0334641|FBtr0334640|FBtr0112788 20644133|20644133|20644133 20644279|20644279|20644279 GATCTCA 7mer-A1 dme-bantam-3p 3R + 20644093 20644170 stop_codon Lrrk FlyBase G33415.1 CACATTCATTGCCTGCTGTGGCGCGCCAAGCACTGGACCTAAATTCGATCTCATTCAAAATATTTGTTGACGTATTTA 45 20644136 0.981245242 7 44 317 0.984615385 1.806179974 0.015384615 0.355555556 0.553846154 45 1 0 64 3R:20644093-20644170 7 44.5 1925 FBgn0038816 197.3233333 3.033333333 4.62 0.225518185 14.67032967 9.632034632 3 3 3 0.25 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 20757447 20757454 - 3R_20757447_20757454_- 0.622207661 0.618795824 0.620501742 0.002412578 CG31195 FBtr0302188 20757267 20758623 3R - 20757249 20757605 3'utr CG31195 FlyBase G52894.1 TGTCCGCTTTTGGTTTTGTTTCTGGAAGTCTTGCCCCCCTGAACATTCCGCAATTTATTTGTAGATCAGTACAAAGCAATGAGAAGAAATCGAATGTGTAAATTGTGCCTTAAACTGAATATTTGTAACACAACAGACTATATCAAAAACATCCGTCCAATGAGTAGTCTACTTTGTATTATGTATCTACATATCTGAATTAGTGATAAGTGCCTTGAGACAAAATCGAATAACTTTTACAACCTGCTTGAGTAGTCTAATGTCTAGAATTTAAGTGTCTTATAATTTTAAAGCAATCCATCCATATATACAATGTTCAAATATATGATTTTGTAGTAAAAACCCCATTGACTTACC 206 20757445 0.981183262 56 192 1383 0.936170213 1.643452676 0.123404255 0.126213592 0.234042553 206 11 4 220 3R:20757249-20757605 8 CG31195 FBtr0302188 20757267 20758623 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R - 20757282 20757525 3'utr CG31195 FlyBase G39936.1 GAGAAGAAATCGAATGTGTAAATTGTGCCTTAAACTGAATATTTGTAACACAACAGACTATATCAAAAACATCCGTCCAATGAGTAGTCTACTTTGTATTATGTATCTACATATCTGAATTAGTGATAAGTGCCTTGAGACAAAATCGAATAACTTTTACAACCTGCTTGAGTAGTCTAATGTCTAGAATTTAAGTGTCTTATAATTTTAAAGCAATCCATCCATATATACAATGTTCAAATAT 161 20757445 0.978751233 42 146 1002 0.91025641 1.425289616 0.145299145 0.347826087 0.551282051 161 14 7 213 3R:20757282-20757525 8 67 1926 FBgn0051195 435.6633333 13.05 19.87666667 0.153788476 5.134099617 3.370786517 -9 -9 -9 0.25 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 20758586 20758593 - 3R_20758586_20758593_- 0.585873452 0.586018376 0.585945914 0.00010246 CG31195 FBtr0302188 20757267 20758623 3R - 20758559 20758621 3'utr CG31195 FlyBase G52896.2 ACCGCACGCCAAATAACTAACGCAAACTTCCGTCCAAACAAAACTCACATCAAATCTCTCCAC 3573 20758594 0.791587169 7 3525 11201 0.986995516 2.301227357 0.010762332 0.192835153 0.353363229 3573 37 21 4402 3R:20758559-20758621 8 CG31195 FBtr0302188 20757267 20758623 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R - 20758559 20758621 3'utr CG31195 FlyBase G39937.1 ACCGCACGCCAAATAACTAACGCAAACTTCCGTCCAAACAAAACTCACATCAAATCTCTCCAC 2319 20758594 0.786185181 10 2292 6947 0.992256637 2.776701184 0.008573009 0.385942216 0.60619469 2319 23 5 3588 3R:20758559-20758621 8 2907 1927 FBgn0051195 435.6633333 13.05 19.87666667 6.67258357 222.7586207 146.2518866 1 1 1 0.25 dme-bantam-3p 7mer-A1 GATCTCA 3R 20807973 20807979 + 3R_20807973_20807979_+ 0.754079693 0.736365724 0.745222709 0.01252569 Syp FBtr0083961|FBtr0334713|FBtr0083963|FBtr0083959 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 3R + 20807925 20807993 3'utr Syp FlyBase G44267.1 TTGGTTGAAGACCGAAGAACCCTGTCGTTTACGTTTCCGCTATTGCTAGATCTCAAGTAAAGCAAAAAG 69 20807968 0.982791842 9 65 489 0.943181818 1.919078092 0.147727273 0.217391304 0.386363636 69 5 0 83 3R:20807925-20807993 7 Syp FBtr0083963|FBtr0083959|FBtr0083961|FBtr0334713 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 GATCTCA 7mer-A1 dme-bantam-3p 3R + 20807909 20807995 3'utr Syp FlyBase G33447.1 TCGACAACAAAATTGTTTGGTTGAAGACCGAAGAACCCTGTCGTTTACGTTTCCGCTATTGCTAGATCTCAAGTAAAGCAAAAAGTT 64 20807968 0.982620701 8 60 452 0.936842105 1.949390007 0.157894737 0.375 0.578947368 64 6 0 89 3R:20807909-20807995 7 64.5 1928 FBgn0038826 3810.263333 58.4 89.27 0.016927964 1.104452055 0.722527165 5 5 5 0.25 dme-miR-986-5p 6mer3-8 ATTCGA 3R 20808912 20808917 + 3R_20808912_20808917_+ 0.58405178 0.640968052 0.612509916 0.040245902 Syp FBtr0083961|FBtr0334713|FBtr0083963|FBtr0083959 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 3R + 20808899 20808942 3'utr Syp FlyBase G44272.1 AACGATTTGTTTAATTCGATAACTGTACTGATTTTATATTGTTT 26 20808931 0.747317201 10 26 243 1 1.531478917 0.058823529 0.230769231 0.411764706 26 0 0 34 3R:20808899-20808942 6 Syp FBtr0083963|FBtr0083959|FBtr0083961|FBtr0334713 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 ATTCGA 6mer3-8 dme-miR-986-5p 3R + 20808910 20808977 3'utr Syp FlyBase G33451.1 TAATTCGATAACTGTACTGATTTTATATTGTTTTAAATTTGTAATTTAATTTGTAAGTTTTTATTGTT 31 20808931 0.685853445 11 28 329 0.893617021 1.62324929 0 0.35483871 0.574468085 31 5 0 42 3R:20808910-20808977 6 25 1929 FBgn0038826 3810.263333 58.4 89.27 0.006561226 0.428082192 0.280049289 -19 -19 -19 0.25 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 20809721 20809726 + 3R_20809721_20809726_+ 0.786674926 0.833535817 0.810105371 0.03313566 Syp FBtr0083961|FBtr0334713|FBtr0083963|FBtr0083959 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 3R + 20809664 20809803 3'utr Syp FlyBase G44279.1 AATTGCAAACTGCGCATGGAAACTGAGCGAAAAAAATGAAAAACTTTACATGAATTGTGATGATGCAAAGGCAAGATTTAATCATAATTACTAAATCTATATATACAGTAAATATATATATCTTTCTCTATAAATATATA 110 20809718 0.979907498 14 105 744 0.966216216 1.854306042 0.398648649 0.254545455 0.445945946 110 4 1 143 3R:20809664-20809803 6 Syp FBtr0083963|FBtr0083959|FBtr0083961|FBtr0334713 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R + 20809651 20809754 3'utr Syp FlyBase G33455.1 AAGGTGGACAAAAAATTGCAAACTGCGCATGGAAACTGAGCGAAAAAAATGAAAAACTTTACATGAATTGTGATGATGCAAAGGCAAGATTTAATCATAATTAC 77 20809718 0.880452781 16 71 522 0.925233645 1.393575203 0.448598131 0.298701299 0.495327103 77 5 3 99 3R:20809651-20809754 6 82 1930 FBgn0038826 3810.263333 58.4 89.27 0.021520822 1.404109589 0.918561667 3 3 3 0.25 dme-miR-14-3p 6mer2-7 AGACTG 3R 20809865 20809870 + 3R_20809865_20809870_+ 0.953886551 0.982170778 0.968028664 0.01999995 Syp FBtr0083961|FBtr0334713|FBtr0083963|FBtr0083959 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 3R + 20809809 20809900 3'utr Syp FlyBase G44280.1 GAGTATATAATGTATATGTAGGCGTAGGAGTGTATAATCTAACTTTACTTTTAAACAGACTGCGTACGTATTAAAAATTTTTAAAATTAATT 53 20809858 0.740886318 15 51 411 0.942028986 1.511883361 0.115942029 0.188679245 0.376811594 53 3 1 65 3R:20809809-20809900 6 Syp FBtr0083963|FBtr0083959|FBtr0083961|FBtr0334713 20806121|20806121|20806121|20806121 20810726|20810726|20810726|20810726 AGACTG 6mer2-7 dme-miR-14-3p 3R + 20809819 20809887 3'utr Syp FlyBase G33456.1 TGTATATGTAGGCGTAGGAGTGTATAATCTAACTTTACTTTTAAACAGACTGCGTACGTATTAAAAATT 18 20809857 0.984098653 7 17 138 0.956521739 1.041392685 0.173913043 0.222222222 0.391304348 18 0 1 22 3R:20809819-20809887 6 27 1931 FBgn0038826 3810.263333 58.4 89.27 0.007086124 0.462328767 0.302453232 7 8 7.5 0.25 dme-miR-305-5p 7mer-A1 GTACAAA 3R 20819758 20819764 - 3R_20819758_20819764_- 0.448832163 0.781719989 0.615276076 0.235387221 CG17271 FBtr0083993 20819624 20820192 3R - 20819752 20819819 3'utr CG17271 FlyBase G52914.1 AAGCGCGACTTTAGAGCAGCAAAAAAAACAGACTGATTGTGTAAACGTTTGTTTTGTACAAAAAGAAA 17 20819783 0.899680616 5 15 88 0.857142857 0.954242509 0.047619048 0.235294118 0.380952381 17 2 1 18 3R:20819752-20819819 7 CG17271 FBtr0083993 20819624 20820192 GTACAAA 7mer-A1 dme-miR-305-5p 3R - 20819749 20819795 3'utr CG17271 FlyBase G39947.1 AAAACAGACTGATTGTGTAAACGTTTGTTTTGTACAAAAAGAAAATG 7 20819767 0.97681865 5 7 48 1 1.176091259 0 0.285714286 0.666666667 7 0 0 15 3R:20819749-20819795 7 4 1932 FBgn0038829 298.4266667 26.90333333 40.93666667 0.013403628 0.148680461 0.097711913 19 3 11 0.25 dme-miR-190-5p 6mer3-8 ACATAT 3R 20839536 20839541 + 3R_20839536_20839541_+ 0.519875102 0.999072546 0.759473824 0.338843731 Synd FBtr0083966|FBtr0334724|FBtr0334725 20839396|20839396|20839396 20839856|20840118|20840118 3R + 20839511 20839550 3'utr Synd FlyBase G44297.1 AGAGTCGTTGATGAAAAATTACCATACATATGTATTAGAA 6 20839539 0.979478684 4 6 38 1 1 0 0.5 0.7 6 0 0 10 3R:20839511-20839550 6 Synd FBtr0083966|FBtr0334724|FBtr0334725 20839396|20839396|20839396 20839856|20840118|20840118 ACATAT 6mer3-8 dme-miR-190-5p 3R + 20839524 20839576 3'utr Synd FlyBase G33472.1 AAAAATTACCATACATATGTATTAGAAATTGTTATGAGCAATCGCTTGCACTA 5 20839538 0.986221132 5 5 34 1 0.698970004 0.2 0 0 5 0 0 5 3R:20839524-20839576 6 4 1933 FBgn0053094 1119.136667 61.56 93.86 0.003574184 0.064977258 0.042616663 -3 -2 -2.5 0.25 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 21051692 21051698 - 3R_21051692_21051698_- 0.781488588 0.802821606 0.792155097 0.015084709 Mvl FBtr0301478|FBtr0089521|FBtr0330046|FBtr0301477 21051560|21051381|21051381|21051381 21052187|21052187|21052058|21052187 3R - 21051650 21051724 3'utr Mvl FlyBase G52955.1 AAATAGTTTAAAAGTCTAATAATAAGGCTGTGAAATTAACTGAGTGTAAATCGAACCACTTCAATTGTCTAATCG 75 21051703 0.986650727 8 62 532 0.84375 1.431363764 0.041666667 0.213333333 0.385416667 75 13 2 81 3R:21051650-21051724 7 Mvl FBtr0330046|FBtr0301477|FBtr0089521|FBtr0301478 21051381|21051381|21051381|21051560 21052058|21052187|21052187|21052187 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R - 21051679 21051724 3'utr Mvl FlyBase G39979.1 AAATAGTTTAAAAGTCTAATAATAAGGCTGTGAAATTAACTGAGTG 46 21051706 0.698837865 7 38 318 0.825396825 1.414973348 0 0.282608696 0.476190476 46 10 1 52 3R:21051679-21051724 7 59.5 1934 FBgn0011672 484.1233333 17.95 27.56 0.122902566 3.314763231 2.15892598 5 8 6.5 0.25 dme-miR-968-5p 7mer-A1 CTACTTA 3R 21051806 21051812 - 3R_21051806_21051812_- 0.489785465 0.54061924 0.515202353 0.035944854 Mvl FBtr0301478|FBtr0089521|FBtr0330046|FBtr0301477 21051560|21051381|21051381|21051381 21052187|21052187|21052058|21052187 3R - 21051788 21051883 3'utr Mvl FlyBase G52956.1 AGGACCTGGGATCAGTGTAACACAATAACTAAATTCTAATTGAAAAGCGTACCAAAAACGGTTCATAAACTCTACTTACTGAGAAGCGCGAAGAGA 15 21051808 0.952626043 7 15 62 1 1.255272505 0.166666667 0.2 0.333333333 15 0 0 18 3R:21051788-21051883 7 Mvl FBtr0330046|FBtr0301477|FBtr0089521|FBtr0301478 21051381|21051381|21051381|21051560 21052058|21052187|21052187|21052187 CTACTTA 7mer-A1 dme-miR-968-5p 3R - 21051770 21051849 3'utr Mvl FlyBase G39980.1 TCTAATTGAAAAGCGTACCAAAAACGGTTCATAAACTCTACTTACTGAGAAGCGCGAAGAGACAAAATAGAAAATCCATG 13 21051834 0.931637713 6 12 47 1 1.301029996 0.05 0.384615385 0.6 13 0 0 20 3R:21051770-21051849 7 6 1935 FBgn0011672 484.1233333 17.95 27.56 0.012393536 0.334261838 0.217706821 -4 22 9 0.25 dme-miR-283-5p 8mer-A1 TGATATTA 3R 21054906 21054913 - 3R_21054906_21054913_- 0.516990192 0.55305452 0.535022356 0.025501311 Mvl FBtr0306350 21054646 21054959 3R - 21054857 21054933 5'utr Mvl FlyBase G52965.1 CACTCCCCCACACACCCTTGTGATATTAACACTAAATCACACGCTTAACACTACTAACACGTACCTAGTAGGGCTCT 10 21054916 0.964914364 4 9 53 0.9 0.954242509 0.1 0 0 10 1 0 9 3R:21054857-21054933 8 Mvl FBtr0306350 21054646 21054959 TGATATTA 8mer-A1 dme-miR-283-5p 3R - 21054904 21054935 5'utr Mvl FlyBase G39986.1 CACACTCCCCCACACACCCTTGTGATATTAAC 5 21054916 0.834775427 2 5 29 1 0.84509804 0 0.4 0.571428571 5 0 0 7 3R:21054904-21054935 8 4.5 1936 FBgn0011672 484.1233333 17.95 27.56 0.009295152 0.250696379 0.163280116 3 3 3 0.25 dme-miR-92b-3p 8mer-A1 GTGCAATA 3R 21070529 21070536 + 3R_21070529_21070536_+ 0.628896157 0.628910826 0.628903491 1.03E-05 AnxB9 FBtr0089517 21070330 21070539 3R + 21070499 21070552 3'utr-intron AnxB9 FlyBase G44364.1 AATCTACAAAACGCTTAGTATTTTCCCTCTGTGCAATAACGTCTAACGTTCAAC 58 21070522 0.966970556 9 55 499 0.974683544 1.58546073 0.17721519 0.293103448 0.481012658 58 1 1 77 3R:21070499-21070552 8 AnxB9 FBtr0089517 21070330 21070539 GTGCAATA 8mer-A1 dme-miR-92b-3p 3R + 21070508 21070550 3'utr-intron AnxB9 FlyBase G33526.1 AACGCTTAGTATTTTCCCTCTGTGCAATAACGTCTAACGTTCA 46 21070534 0.836817315 7 43 425 0.9375 1.77815125 0.234375 0.326086957 0.515625 46 4 0 60 3R:21070508-21070550 8 47.5 1937 FBgn0000083 3186.973333 280.66 427.6933333 0.014904423 0.169243925 0.111060885 7 -5 1 0.25 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3R 21110770 21110776 + 3R_21110770_21110776_+ 0.792119212 0.799336552 0.795727882 0.005103472 rtet FBtr0084009|FBtr0084009 21110706|21110706 21110834|21110834 3R + 21110728 21110804 3'utr rtet FlyBase G44381.1 TTAAACTCACTAGAGATCAACGGAAGTATTAGCTGCACATTATACTTAATTTATCGTTTTTTACAAGTATTTTATAT 21 21110767 0.990413708 7 19 195 0.923076923 1.079181246 0.153846154 0.19047619 0.346153846 21 1 1 24 3R:21110728-21110804 7 rtet FBtr0084009|FBtr0084009 21110706|21110706 21110834|21110834 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3R + 21110729 21110802 3'utr rtet FlyBase G33536.1 TAAACTCACTAGAGATCAACGGAAGTATTAGCTGCACATTATACTTAATTTATCGTTTTTTACAAGTATTTTAT 23 21110767 0.981726444 10 22 193 0.944444444 1.531478917 0.083333333 0.391304348 0.611111111 23 2 0 34 3R:21110729-21110802 7 13.5 1938 FBgn0028468 207.3333333 14.48 21.91 0.06511254 0.932320442 0.616157006 3 3 3 0.25 dme-miR-999-3p 7mer-m8 AGTTAAC 3R 21115688 21115694 + 3R_21115688_21115694_+ 0.659528847 0.393954234 0.52674154 0.187789601 Rab11 FBtr0084011|FBtr0084010 21115383|21115383 21116146|21116146 3R + 21115658 21115717 3'utr Rab11 FlyBase G44387.1 AAAGAATCGAAAGCAACAACATCCGGCTGTAGTTAACTGCGGTTTAAACTGAAGTTTTAT 34 21115679 0.822651977 7 28 158 0.837209302 1.556302501 0.11627907 0.264705882 0.418604651 34 7 0 36 3R:21115658-21115717 7 Rab11 FBtr0084010|FBtr0084011 21115383|21115383 21116146|21116146 AGTTAAC 7mer-m8 dme-miR-999-3p 3R + 21115662 21115701 3'utr Rab11 FlyBase G33545.1 AATCGAAAGCAACAACATCCGGCTGTAGTTAACTGCGGTT 15 21115679 0.966826174 6 13 63 0.923076923 1.380211242 0.307692308 0.466666667 0.692307692 15 2 0 24 3R:21115662-21115701 7 24.5 1939 FBgn0015790 5922.233333 446.8466667 689.1166667 0.004136953 0.054828651 0.035552761 9 9 9 0.25 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 21115801 21115806 + 3R_21115801_21115806_+ 0.998054281 0.999546752 0.998800516 0.001055357 Rab11 FBtr0084011|FBtr0084010 21115383|21115383 21116146|21116146 3R + 21115769 21115813 3'utr Rab11 FlyBase G44388.1 CAAGCAAAACTAAACACTCCAAATTCAGTTTAAGCTGTAGAACTA 8 21115793 0.884779434 6 8 46 1 1 0.2 0.25 0.4 8 0 0 10 3R:21115769-21115813 6 Rab11 FBtr0084010|FBtr0084011 21115383|21115383 21116146|21116146 AGCTGT 6mer3-8 dme-miR-1008-3p 3R + 21115723 21115814 3'utr Rab11 FlyBase G33546.1 TACAGATCCATGAGTATCGCATAAATCGACCGCCGCGGAAAGAAAGCAAGCAAAACTAAACACTCCAAATTCAGTTTAAGCTGTAGAACTAT 8 21115791 0.987906754 5 6 49 0.777777778 0.84509804 0 0.125 0.222222222 8 2 0 7 3R:21115723-21115814 6 5 1940 FBgn0015790 5922.233333 446.8466667 689.1166667 0.000844276 0.011189521 0.007255665 8 10 9 0.25 dme-miR-184-5p 6mer3-8 TGATAA 3R 21116033 21116038 + 3R_21116033_21116038_+ 0.98941835 0.999938602 0.994678476 0.007438975 Rab11 FBtr0084011|FBtr0084010 21115383|21115383 21116146|21116146 3R + 21115987 21116043 3'utr Rab11 FlyBase G44390.1 GGTTTCTCGCAACATTTTAAACGATTGGCCACTTGGTAAAACTAGCTGATAAAGAGA 5 21116033 0.955132334 4 5 27 1 0.698970004 0.4 0 0 5 0 0 5 3R:21115987-21116043 6 Rab11 FBtr0084010|FBtr0084011 21115383|21115383 21116146|21116146 TGATAA 6mer3-8 dme-miR-184-5p 3R + 21116005 21116049 3'utr Rab11 FlyBase G33547.1 AAACGATTGGCCACTTGGTAAAACTAGCTGATAAAGAGAAATCAA 6 21116029 0.948312603 5 6 26 1 0.954242509 0.444444444 0.333333333 0.555555556 6 0 0 9 3R:21116005-21116049 6 4.5 1941 FBgn0015790 5922.233333 446.8466667 689.1166667 0.000759848 0.010070569 0.006530099 0 4 2 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3R 21116121 21116127 + 3R_21116121_21116127_+ 0.516844 0.521190364 0.519017182 0.003073369 Rab11 FBtr0084011|FBtr0084010 21115383|21115383 21116146|21116146 3R + 21116088 21116146 3'utr Rab11 FlyBase G44391.1 CGAAATAACATCATTTGTGTTTGCTATGTTAAGTGTGATTAAATAAATATAATTTAAAT 13 21116128 0.904332942 8 11 119 0.8 1.079181246 0 0.153846154 0.266666667 13 3 0 12 3R:21116088-21116146 7 Rab11 FBtr0084010|FBtr0084011 21115383|21115383 21116146|21116146 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 21116092 21116131 3'utr Rab11 FlyBase G33548.1 ATAACATCATTTGTGTTTGCTATGTTAAGTGTGATTAAAT 6 21116129 0.989468937 5 5 48 0.818181818 0.954242509 0.181818182 0.666666667 0.818181818 6 2 0 9 3R:21116092-21116131 7 9 1942 FBgn0015790 5922.233333 446.8466667 689.1166667 0.001519697 0.020141137 0.013060198 -7 -8 -7.5 0.25 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 21120011 21120017 - 3R_21120011_21120017_- 0.634539019 0.642898477 0.638718748 0.005911059 slmb FBtr0330049|FBtr0084032 21119250|21119250 21120458|21120719 3R - 21119878 21120033 3'utr slmb FlyBase G53022.1 ACAAGTATCGCGTTTAGGCAGCTGCCGCCTCAAGAATCGCAGCAGGAATCTTCAGCGCGGCCAGAAGAATCAGTCTTTAGCATAAATGTTAGTTAGAGTTGCATCATTGAAATTGGCAGAGCGCGTTGCCGTTTTGCACATTTGTAACCTATTTTA 58 21120019 0.980102631 14 54 315 0.970149254 1.812913357 0.164179104 0.157894737 0.28358209 57 2 0 65 3R:21119878-21120033 7 slmb FBtr0330049|FBtr0084032 21119250|21119250 21120458|21120719 GGCAGCT 7mer-m8 dme-miR-980-3p 3R - 21119999 21120044 3'utr slmb FlyBase G40029.1 AGCTCAAATACACAAGTATCGCGTTTAGGCAGCTGCCGCCTCAAGA 28 21120020 0.686424971 6 27 152 0.961538462 1.698970004 0.269230769 0.535714286 0.75 28 2 0 50 3R:21119999-21120044 7 31 1943 FBgn0023423 1620.336667 64.75333333 99.38333333 0.019131827 0.478739833 0.311923528 2 3 2.5 0.25 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 21140271 21140276 + 3R_21140271_21140276_+ 0.80042077 0.802155465 0.801288117 0.001226618 meigo FBtr0084017|FBtr0113259 21140038|21140038 21140365|21140365 3R + 21140249 21140323 3'utr meigo FlyBase G44423.1 TATTAGAAAAGGAACAAATATTGTGCAAAAGTTTACACCAGACCTGCGGGTCTCTAACATACAGGATCATTCAAT 63 21140269 0.888460313 5 61 294 0.971428571 1.531478917 0.185714286 0.111111111 0.2 63 1 1 68 3R:21140249-21140323 6 meigo FBtr0113259|FBtr0084017 21140038|21140038 21140365|21140365 GTGCAA 6mer3-8 dme-miR-92b-3p 3R + 21140250 21140289 3'utr meigo FlyBase G33561.1 ATTAGAAAAGGAACAAATATTGTGCAAAAGTTTACACCAG 52 21140269 0.665891228 2 49 237 0.972222222 1.544068044 0.208333333 0.307692308 0.5 52 1 1 70 3R:21140250-21140289 6 53.5 1944 FBgn0250820 369.6666667 29.78 45.5 0.144724977 1.796507723 1.175824176 2 2 2 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 21159358 21159363 - 3R_21159358_21159363_- 0.730635533 0.730892654 0.730764093 0.000181868 CG10824 FBtr0084028|FBtr0084028|FBtr0084028 21159236|21159236|21159236 21159389|21159389|21159389 3R - 21159320 21159375 3'utr CG10824 FlyBase G53041.1 GCCCATTTTTTATGTGATCACTACATTTTCAAAGCTTTACAATTATATGTATACAT 32 21159366 0.978663783 9 23 301 0.785714286 0.740362689 0.119047619 0.1875 0.380952381 32 4 5 33 3R:21159320-21159375 6 CG10824 FBtr0084028|FBtr0084028|FBtr0084028 21159236|21159236|21159236 21159389|21159389|21159389 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 21159332 21159375 3'utr CG10824 FlyBase G40046.1 GCCCATTTTTTATGTGATCACTACATTTTCAAAGCTTTACAATT 31 21159366 0.587900496 11 26 280 0.818181818 0.711204461 0.090909091 0.322580645 0.522727273 31 2 6 36 3R:21159332-21159375 6 28.5 1945 FBgn0038865 99.77666667 6.58 10.09 0.285637925 4.331306991 2.824578791 3 3 3 0.25 dme-miR-283-5p 6mer2-7 GATATT 3R 21213975 21213980 + 3R_21213975_21213980_+ 0.924110221 0.963327021 0.943718621 0.027730465 SNF4Agamma FBtr0301586|FBtr0301588 21212526|21212526 21214269|21214269 3R + 21213947 21214006 3'utr SNF4Agamma FlyBase G44457.1 ATTACTAGATTAAACAATGAGAAATTTGGATATTGAATTAATAATGGTAAAAGGCTTAAC 24 21213973 0.955261367 7 24 187 1 1.477121255 0 0.25 0.4 24 0 0 30 3R:21213947-21214006 6 SNF4Agamma FBtr0301588|FBtr0301586 21212526|21212526 21214269|21214269 GATATT 6mer2-7 dme-miR-283-5p 3R + 21213952 21213987 3'utr SNF4Agamma FlyBase G33590.1 TAGATTAAACAATGAGAAATTTGGATATTGAATTAA 21 21213973 0.862708028 5 21 164 1 1.462397998 0.034482759 0.285714286 0.482758621 21 0 0 29 3R:21213952-21213987 6 21.5 1946 FBgn0264357 1601.583333 44.32333333 67.41333333 0.013424216 0.485071821 0.318928006 2 2 2 0.25 dme-miR-1002-5p 7mer-m8 CTACTTA 3R 21266397 21266403 - 3R_21266397_21266403_- 0.534315187 0.560372896 0.547344041 0.018425576 Rab1 FBtr0084104 21266027 21266947 3R - 21266385 21266466 3'utr Rab1 FlyBase G53065.1 TAACTACACATTAATTGAGCGCAGGCGACGGCAGGAGCAATTGTACTTGTCCTGTGTCAGCTACTACTTACCACTATGTATA 21 21266399 0.965452715 7 21 127 1 1.361727836 0.347826087 0.095238095 0.173913043 21 0 0 23 3R:21266385-21266466 7 Rab1 FBtr0084104 21266027 21266947 CTACTTA 7mer-m8 dme-miR-1002-5p 3R - 21266372 21266454 3'utr Rab1 FlyBase G40068.1 AATTGAGCGCAGGCGACGGCAGGAGCAATTGTACTTGTCCTGTGTCAGCTACTACTTACCACTATGTATACATATGTATGTGT 11 21266399 0.963019567 7 10 58 0.928571429 0.812913357 0.428571429 0.181818182 0.357142857 11 0 1 13 3R:21266372-21266454 7 8 1947 FBgn0016700 3065.546667 206.5566667 315.7 0.002609649 0.038730292 0.025340513 -4 -4 -4 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 21271338 21271343 - 3R_21271338_21271343_- 0.730939912 0.730036378 0.730488145 0.000638871 CG3308 FBtr0084102|FBtr0084102|FBtr0084102 21271076|21271076|21271076 21271954|21271954|21271954 3R - 21271323 21271391 3'utr CG3308 FlyBase G53081.1 TTCTTGTTGCGACGATGACGATGATGATGATGATTATGGGAAACGTAATGTGATCATTTTAAAAGCTAA 36 21271345 0.704356967 14 34 253 0.953488372 1.311753861 0.558139535 0.138888889 0.279069767 36 1 1 41 3R:21271323-21271391 6 CG3308 FBtr0084102|FBtr0084102|FBtr0084102 21271076|21271076|21271076 21271954|21271954|21271954 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 21271317 21271443 3'utr CG3308 FlyBase G40081.1 ACTTTTAGTTTGTGTCTCTGTTAGCCTGTAGTCGTACTTTTGTACATATTTATTCTTGTTGCGACGATGACGATGATGATGATGATTATGGGAAACGTAATGTGATCATTTTAAAAGCTAATTAGTT 37 21271335 0.988787621 16 34 342 0.903225806 1.748188027 0.483870968 0.486486486 0.693548387 37 6 0 56 3R:21271317-21271443 6 22 1948 FBgn0038877 892.1133333 50.83666667 77.60666667 0.024660544 0.432758508 0.283480801 2 -8 -3 0.25 dme-miR-980-3p 6mer2-7 GCAGCT 3R 21271485 21271490 - 3R_21271485_21271490_- 0.998512578 0.921876009 0.960194294 0.05419026 CG3308 FBtr0084102 21271076 21271954 3R - 21271474 21271523 3'utr CG3308 FlyBase G53083.1 CTCCCGAAGCGATATATGTTAATGTTAAGTGCTGCAGCTTGTCTTTTGTT 16 21271482 0.967894432 10 15 143 0.95 0.977723605 0.05 0.25 0.4 16 0 1 19 3R:21271474-21271523 6 CG3308 FBtr0084102 21271076 21271954 GCAGCT 6mer2-7 dme-miR-980-3p 3R - 21271462 21271508 3'utr CG3308 FlyBase G40082.1 ATGTTAATGTTAAGTGCTGCAGCTTGTCTTTTGTTTGTTTCTTCTGT 23 21271482 0.90662099 8 23 237 1 1.531478917 0.294117647 0.260869565 0.5 23 0 0 34 3R:21271462-21271508 6 17.5 1949 FBgn0038877 892.1133333 50.83666667 77.60666667 0.019616342 0.344239722 0.225496091 -8 -8 -8 0.25 dme-miR-305-3p 7mer-m8 ATGTGCC 3R 21271836 21271842 - 3R_21271836_21271842_- 0.672302877 0.674455354 0.673379115 0.001522047 CG3308 FBtr0084102 21271076 21271954 3R - 21271770 21272096 lincRNA_intron-lincRNA_exon CG3308 FlyBase G53085.1 CAGATATTGTACCTTCCAACGCAACGAGCCGTGCAGTTTGCCCGCCATTGTAGAGATGATAGCCGCCTTCATGAAGAAAAGCCCGGACGAGGTGGCTTTGGCCACTGCCTTTAATGCCCTGAAACTGTTTGGCTTGTCCTAGAAAATGGTAAAGGAGCCACATGGAACTGAACGACAAAGTGTGCCACCCAGCAGCTTTAAACCCGTAACTCTATAGATTCAACGAGCCTGAGATTCACGATAGACTCATACCTATGTGCCTTAACCACTAATCGAATTCAGGATGAAGCGCTTATCCTGATCCCCACACATACACACATCCACAAA 194 21271841 0.984368764 32 189 994 0.974137931 2.053078443 0.254310345 0.164948454 0.301724138 194 5 1 226 3R:21271770-21272096 7 CG3308 FBtr0084102 21271076 21271954 ATGTGCC 7mer-m8 dme-miR-305-3p 3R - 21271789 21271946 3'utr CG3308 FlyBase G40084.1 AAAGGAGCCACATGGAACTGAACGACAAAGTGTGCCACCCAGCAGCTTTAAACCCGTAACTCTATAGATTCAACGAGCCTGAGATTCACGATAGACTCATACCTATGTGCCTTAACCACTAATCGAATTCAGGATGAAGCGCTTATCCTGATCCCCAC 121 21271841 0.981685715 13 116 574 0.938888889 1.625826713 0.261111111 0.363636364 0.572222222 121 8 3 169 3R:21271789-21271946 7 65.5 1950 FBgn0038877 892.1133333 50.83666667 77.60666667 0.073421165 1.288440102 0.843999656 -1 -1 -1 0.25 dme-miR-317-3p 6mer2-7 GTGTTC 3R 21361863 21361868 + 3R_21361863_21361868_+ 0.926488145 0.909739001 0.918113573 0.011843402 pre-mod(mdg4)-Z FBtr0303402 21361829 21362131 3R + 21361839 21361882 3'utr pre-mod(mdg4)-Z FlyBase G44529.1 TATACATTCCCAACCCAAACGTTCGTGTTCTGTTAGGGCTAAGC 8 21361869 0.983086829 3 8 63 1 0.954242509 0 0.125 0.222222222 8 0 0 9 3R:21361839-21361882 6 pre-mod(mdg4)-Z FBtr0303402 21361829 21362131 GTGTTC 6mer2-7 dme-miR-317-3p 3R + 21361843 21361883 3'utr pre-mod(mdg4)-Z FlyBase G33639.1 CATTCCCAACCCAAACGTTCGTGTTCTGTTAGGGCTAAGCT 8 21361869 0.654697288 2 8 70 1 1.041392685 0.181818182 0.25 0.454545455 8 0 0 11 3R:21361843-21361883 6 8 1951 FBgn0261838 149.3333333 9.943333333 15.14333333 0.053571429 0.804559169 0.528285274 -6 -6 -6 0.25 dme-miR-14-3p 7mer-A1 AGACTGA 3R 21361925 21361931 + 3R_21361925_21361931_+ 0.806988221 0.814007629 0.810497925 0.004963465 pre-mod(mdg4)-Z FBtr0303402 21361829 21362131 3R + 21361905 21361993 3'utr pre-mod(mdg4)-Z FlyBase G44530.1 TGAGCGTATATCATTGATTTAGACTGAGTGTCCCGAGCCTAGTTAGGATGGGTAAGTAGCCTGTTCATCTGGGATCTCAAAGTACCATT 96 21361923 0.888712736 17 88 710 0.923076923 1.73239376 0.247863248 0.166666667 0.316239316 96 8 1 108 3R:21361905-21361993 7 pre-mod(mdg4)-Z FBtr0303402 21361829 21362131 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 21361902 21361987 3'utr pre-mod(mdg4)-Z FlyBase G33640.1 TCTTGAGCGTATATCATTGATTTAGACTGAGTGTCCCGAGCCTAGTTAGGATGGGTAAGTAGCCTGTTCATCTGGGATCTCAAAGT 65 21361923 0.791859326 10 62 475 0.927083333 1.347330015 0.364583333 0.323076923 0.541666667 65 4 3 89 3R:21361902-21361987 7 65.5 1952 FBgn0261838 149.3333333 9.943333333 15.14333333 0.438616071 6.587328193 4.325335681 2 2 2 0.25 dme-miR-305-5p 7mer-A1 GTACAAA 3R 21527137 21527143 + 3R_21527137_21527143_+ 0.584987137 0.766079428 0.675533282 0.128051593 CG7956 FBtr0334664 21526920 21527691 3R + 21527097 21527147 3'utr CG7956 FlyBase G44556.1 TTATCTTTACAATAAATACCTAAGACTAGCATGTATTATTGTACAAAAAAA 8 21527135 0.974888575 3 8 56 1 0.954242509 0 0.125 0.222222222 8 0 0 9 3R:21527097-21527147 7 CG7956 FBtr0334664 21526920 21527691 GTACAAA 7mer-A1 dme-miR-305-5p 3R + 21527109 21527147 3'utr CG7956 FlyBase G33659.1 TAAATACCTAAGACTAGCATGTATTATTGTACAAAAAAA 5 21527133 0.98405328 5 5 33 1 0.698970004 0 0 0 5 0 0 5 3R:21527109-21527147 7 4.5 1953 FBgn0038890 1061.573333 33.39 51.31 0.004238991 0.134770889 0.087702202 2 4 3 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3R 21527808 21527814 + 3R_21527808_21527814_+ 0.521174308 0.513259351 0.517216829 0.005596679 CG7956 FBtr0301211 21527595 21528598 3R + 21527782 21527836 3'utr CG7956 FlyBase G44558.1 ATAATGTAGTTGATATACGCCATATTTGTGATTGTTATAGCACCAAGCTGTAGTG 48 21527814 0.590203976 7 46 452 0.981818182 1.431363764 0.072727273 0.125 0.236363636 48 0 1 54 3R:21527782-21527836 7 CG7956 FBtr0301211 21527595 21528598 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 21527793 21527858 3'utr CG7956 FlyBase G33660.1 GATATACGCCATATTTGTGATTGTTATAGCACCAAGCTGTAGTGAGTTTATAGATTTTTGGGCAAC 25 21527814 0.988218921 6 24 217 0.977777778 1.643452676 0.044444444 0.56 0.755555556 25 1 0 44 3R:21527793-21527858 7 34 1954 FBgn0038890 1061.573333 33.39 51.31 0.032027933 1.018268943 0.662638862 -6 -6 -6 0.25 dme-miR-276a-3p 7mer-m8 AGTTCCT 3R 21570773 21570779 - 3R_21570773_21570779_- 0.445566744 0.506455416 0.47601108 0.043054813 InR FBtr0084121|FBtr0290232|FBtr0290230|FBtr0290231 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 3R - 21570714 21570921 3'utr InR FlyBase G53139.2 ATTAATTTAACAATGTAATACGCTATATGCATAACGAAACAATAGATATTCTACACAAACACACATGCACACAGACACCCACACACCCATACACACATTTACATATATTACACACATACACACTAAAAAGACTGAAAGATATAGTTCCTTTTGTTTTTATGTACATAAAAAAATGTGAAAAGAAAAAAGAGAAATTCTAACGAAAATC 303 21570805 0.999945463 24 268 1646 0.883333333 1.461034435 0.111111111 0.138613861 0.275 303 32 10 318 3R:21570714-21570921 7 InR FBtr0290230|FBtr0290231|FBtr0084121|FBtr0290232 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 AGTTCCT 7mer-m8 dme-miR-276a-3p 3R - 21570728 21570817 3'utr InR FlyBase G40139.1 ATATTACACACATACACACTAAAAAGACTGAAAGATATAGTTCCTTTTGTTTTTATGTACATAAAAAAATGTGAAAAGAAAAAAGAGAAA 239 21570772 0.975740556 16 211 1338 0.872881356 1.410777233 0.076271186 0.372384937 0.576271186 239 34 11 309 3R:21570728-21570817 7 125 1955 FBgn0013984 3333.303333 37.67666667 58.15666667 0.037500338 3.317703265 2.149366653 26 -7 9.5 0.25 dme-miR-7-5p 6mer3-8 GTCTTC 3R 21572393 21572398 - 3R_21572393_21572398_- 0.956627501 0.858342278 0.90748489 0.069498131 InR FBtr0084121|FBtr0290232|FBtr0290230|FBtr0290231 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 3R - 21572317 21572416 3'utr InR FlyBase G53148.1 AAAAACAAAACAGCAACTGTCTTCACTGAGTTAGCTAGCAATAGTTATAATTATCCAAACACCCGAACTACACGTAACTAGGTTTAAATGTTATTCAGCT 39 21572398 0.973760682 14 35 214 0.884615385 1.662757832 0 0.230769231 0.423076923 39 6 0 46 3R:21572317-21572416 6 InR FBtr0290230|FBtr0290231|FBtr0084121|FBtr0290232 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 GTCTTC 6mer3-8 dme-miR-7-5p 3R - 21572336 21572453 3'utr InR FlyBase G40151.1 GAAATAGATGAACTCTACAACAGCAAACAAGCAATACAAAAACAAAACAGCAACTGTCTTCACTGAGTTAGCTAGCAATAGTTATAATTATCCAAACACCCGAACTACACGTAACTAG 25 21572399 0.981590083 10 19 139 0.714285714 1.397940009 0.171428571 0.32 0.514285714 25 10 0 25 3R:21572336-21572453 6 18 1956 FBgn0013984 3333.303333 37.67666667 58.15666667 0.005400049 0.47774927 0.309508798 0 1 0.5 0.25 dme-miR-965-3p 7mer-A1 ACGCTTA 3R 21786170 21786176 - 3R_21786170_21786176_- 0.789748668 0.808161759 0.798955214 0.013020028 CASK FBtr0084162|FBtr0112873|FBtr0301327|FBtr0301328|FBtr0084161|FBtr0330368|FBtr0112872 21785760|21785760|21783398|21785760|21785760|21785760|21785760 21786682|21786682|21786682|21786682|21786682|21786589|21786682 3R - 21786109 21786210 3'utr CASK FlyBase G53257.1 TGTTTTATTCAGCATTTAGTCAAAACAGCATTAAACGCTTATGTAAATCTTGCACTTGTTAGTGTCTAAGTTAAATGGAGTTAGACAAATCGAAACTGAAGC 37 21786153 0.987016403 15 35 297 0.955555556 1.633468456 0.111111111 0.216216216 0.355555556 37 2 0 43 3R:21786109-21786210 7 CASK FBtr0301328|FBtr0084161|FBtr0330368|FBtr0112872|FBtr0084162|FBtr0112873|FBtr0301327 21785760|21785760|21785760|21785760|21785760|21785760|21783398 21786682|21786682|21786589|21786682|21786682|21786682|21786682 ACGCTTA 7mer-A1 dme-miR-965-3p 3R - 21786125 21786226 3'utr CASK FlyBase G40239.1 ATTGTTTTGTTGTATTTGTTTTATTCAGCATTTAGTCAAAACAGCATTAAACGCTTATGTAAATCTTGCACTTGTTAGTGTCTAAGTTAAATGGAGTTAGAC 24 21786179 0.984813899 14 23 189 0.96875 1.491361694 0.0625 0.291666667 0.46875 24 1 0 31 3R:21786125-21786226 7 16 1957 FBgn0013759 1781.206667 49.49333333 75.88666667 0.008982675 0.323275862 0.210840727 -23 3 -10 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 3R 21786240 21786245 - 3R_21786240_21786245_- 0.931429954 0.914047036 0.922738495 0.012291637 CASK FBtr0084162|FBtr0112873|FBtr0301327|FBtr0301328|FBtr0084161|FBtr0330368|FBtr0112872 21785760|21785760|21783398|21785760|21785760|21785760|21785760 21786682|21786682|21786682|21786682|21786682|21786589|21786682 3R - 21786224 21786278 3'utr CASK FlyBase G53258.1 TTTAATCGATTGTATTTGCCATTCCATGCTCAATGTGTTATATTTTACGATTATT 9 21786245 0.891542328 5 8 82 1 1.146128036 0.357142857 0.333333333 0.571428571 9 0 0 14 3R:21786224-21786278 6 CASK FBtr0301328|FBtr0084161|FBtr0330368|FBtr0112872|FBtr0084162|FBtr0112873|FBtr0301327 21785760|21785760|21785760|21785760|21785760|21785760|21783398 21786682|21786682|21786589|21786682|21786682|21786682|21786682 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 21786232 21786275 3'utr CASK FlyBase G40240.1 AATCGATTGTATTTGCCATTCCATGCTCAATGTGTTATATTTTA 14 21786245 0.723780237 4 13 136 0.875 1.322219295 0.125 0.571428571 0.75 14 3 0 21 3R:21786232-21786275 6 8.5 1958 FBgn0013759 1781.206667 49.49333333 75.88666667 0.004772046 0.171740302 0.112009136 0 0 0 0.25 dme-bantam-3p 8mer-A1 TGATCTCA 3R 21851167 21851174 - 3R_21851167_21851174_- 0.630129768 0.629939242 0.630034505 0.000134775 glec FBtr0084157 21850692 21851709 3R - 21851137 21851363 3'utr glec FlyBase G53271.1 GATATCGGTCTTATAATGGAAATTATTAAGTTAATGGATATGTGCTAATGTTAGACAAGCGATCGACAGCGCCATGCATCCACTATATATAGACTAAACCCCAACCCAAACCAATTCAAGCGTTCTCAGCGTGTTTTCGGGTCCAGATGCACGCGTGTGCCAAAAGTATTTACAATTTACTTTGTGTCATGATCTCAATTATTAAAAACAATTTTATTATTTTGTTT 358 21851174 0.987084384 40 342 2981 0.971365639 2.042378598 0.167400881 0.198879552 0.370044053 357 10 3 441 3R:21851137-21851363 8 glec FBtr0084157 21850692 21851709 TGATCTCA 8mer-A1 dme-bantam-3p 3R - 21851154 21851329 3'utr glec FlyBase G40253.1 TGGATATGTGCTAATGTTAGACAAGCGATCGACAGCGCCATGCATCCACTATATATAGACTAAACCCCAACCCAAACCAATTCAAGCGTTCTCAGCGTGTTTTCGGGTCCAGATGCACGCGTGTGCCAAAAGTATTTACAATTTACTTTGTGTCATGATCTCAATTATTAAAAACA 230 21851174 0.897124119 29 221 1929 0.962427746 2.045322979 0.161849711 0.382608696 0.589595376 230 11 2 333 3R:21851154-21851329 8 205.5 1959 FBgn0015229 300 18.05666667 27.87 0.685 11.3808381 7.373519914 0 0 0 0.25 dme-miR-283-5p 8mer-A1 TGATATTA 3R 21851645 21851652 - 3R_21851645_21851652_- 0.53404123 0.590590663 0.562315947 0.039986535 glec FBtr0084157 21850692 21851709 3R - 21851623 21851696 3'utr glec FlyBase G53273.1 TGACGATGACAAATAGCCCCTGGCGGAGCAATAATTGCAATATATGATATTAATTGTAAATGTAATTTTAATTT 24 21851656 0.858994323 8 23 158 0.964285714 1.431363764 0.142857143 0.125 0.25 24 1 0 27 3R:21851623-21851696 8 glec FBtr0084157 21850692 21851709 TGATATTA 8mer-A1 dme-miR-283-5p 3R - 21851624 21851696 3'utr glec FlyBase G40256.1 TGACGATGACAAATAGCCCCTGGCGGAGCAATAATTGCAATATATGATATTAATTGTAAATGTAATTTTAATT 18 21851664 0.931655859 10 18 110 1 1.51851394 0.121212121 0.555555556 0.757575758 18 0 0 33 3R:21851624-21851696 8 9 1960 FBgn0015229 300 18.05666667 27.87 0.03 0.498430866 0.322927879 4 12 8 0.25 dme-miR-1003-3p 8mer-A1 ATGTGAGA 3R 22078843 22078850 + 3R_22078843_22078850_+ 0.492719209 0.606648434 0.549683821 0.08056011 how FBtr0335195|FBtr0301401|FBtr0084177 22074557|22074557|22074557 22079321|22079321|22079321 3R + 22078819 22078894 3'utr how FlyBase G44606.1 ACTCTGTTGAAATTATTCTGCGAAATGTGAGACTTATACTCAGAAACAAAACGATGTTCAACCACATGGGAGTTGA 27 22078846 0.969065254 5 26 149 1 1.477121255 0.033333333 0.111111111 0.2 27 0 0 30 3R:22078819-22078894 8 how FBtr0301401|FBtr0084177|FBtr0335195 22074557|22074557|22074557 22079321|22079321|22079321 ATGTGAGA 8mer-A1 dme-miR-1003-3p 3R + 22078809 22078862 3'utr how FlyBase G33692.1 GTATACAGAAACTCTGTTGAAATTATTCTGCGAAATGTGAGACTTATACTCAGA 25 22078846 0.964281605 4 25 135 1 1.51851394 0.03030303 0.24 0.424242424 25 0 0 33 3R:22078809-22078862 8 24.5 1961 FBgn0264491 669.8 25.87 39.62333333 0.036578083 0.947042907 0.618322537 -3 -3 -3 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-m8 CTGTGAT 3R 22363961 22363967 + 3R_22363961_22363967_+ 0.583666692 0.406014592 0.494840642 0.125619005 Muted FBtr0110878|FBtr0110878|FBtr0110878|FBtr0344526|FBtr0344526|FBtr0344526 22363523|22363523|22363523|22363523|22363523|22363523 22364580|22364580|22364580|22364580|22364580|22364580 3R + 22363939 22363987 3'utr Muted FlyBase G44626.1 TTCTGCATCAGCTAATTGAGTCCTGTGATCTGCTCCTGCCCGAAAACGA 31 22363969 0.775499845 8 31 222 1 1.568201724 0.405405405 0.129032258 0.27027027 31 0 0 37 3R:22363939-22363987 7 Muted FBtr0344526|FBtr0344526|FBtr0344526|FBtr0110878|FBtr0110878|FBtr0110878 22363523|22363523|22363523|22363523|22363523|22363523 22364580|22364580|22364580|22364580|22364580|22364580 CTGTGAT 7mer-m8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 22363948 22363987 3'utr Muted FlyBase G33709.1 AGCTAATTGAGTCCTGTGATCTGCTCCTGCCCGAAAACGA 17 22363969 0.894991098 3 16 115 0.95 1.278753601 0.2 0.176470588 0.3 17 1 0 19 3R:22363948-22363987 7 24 1962 FBgn0083967 164.1666667 13.59 20.94666667 0.146192893 1.766004415 1.145767027 -8 -8 -8 0.25 dme-miR-1012-3p 7mer-m8 TTGACTA 3R 22364500 22364506 + 3R_22364500_22364506_+ 0.628413047 0.629507334 0.628960191 0.000773787 Muted FBtr0110878|FBtr0344526 22363523|22363523 22364580|22364580 3R + 22364474 22364535 stop_codon Muted FlyBase G44628.1 TCAAGTCCAGACATTGAAACCCCATGTTGACTAGATAGATGATCTGCGAGTAAAAATCGTTC 8 22364513 0.977173596 2 7 51 1 1.079181246 0 0.375 0.583333333 8 0 0 12 3R:22364474-22364535 7 Muted FBtr0344526|FBtr0110878 22363523|22363523 22364580|22364580 TTGACTA 7mer-m8 dme-miR-1012-3p 3R + 22364466 22364524 stop_codon Muted FlyBase G33710.1 GAGGGAAGTCAAGTCCAGACATTGAAACCCCATGTTGACTAGATAGATGATCTGCGAGT 9 22364513 0.957884778 5 9 44 1 1.113943352 0.153846154 0.444444444 0.615384615 9 0 0 13 3R:22364466-22364524 7 7 1963 FBgn0083967 164.1666667 13.59 20.94666667 0.042639594 0.515084621 0.33418205 -13 -13 -13 0.25 dme-miR-184-3p 7mer-m8 TCCGTCC 3R 22418799 22418805 + 3R_22418799_22418805_+ 0.654847262 0.513793612 0.584320437 0.099740028 lqfR FBtr0299515 22418577 22419051 3R + 22418774 22418829 3'utr lqfR FlyBase G44679.1 CCGGATCAAACCCATTAATTCCACATCCGTCCTGATCGTCCACTCGGAATTTGAAA 51 22418806 0.968644362 7 46 328 0.918032787 1.447158031 0.180327869 0.117647059 0.262295082 51 4 1 56 3R:22418774-22418829 7 lqfR FBtr0299515 22418577 22419051 TCCGTCC 7mer-m8 dme-miR-184-3p 3R + 22418788 22418826 3'utr lqfR FlyBase G33751.1 TTAATTCCACATCCGTCCTGATCGTCCACTCGGAATTTG 24 22418806 0.713692323 4 21 148 0.842105263 1.505149978 0.131578947 0.458333333 0.657894737 24 6 0 32 3R:22418788-22418826 7 37 1964 FBgn0261279 676.23 25.48666667 39.00333333 0.054715112 1.451739472 0.948636869 -7 -7 -7 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 22460604 22460610 + 3R_22460604_22460610_+ 0.579624098 0.580240845 0.579932471 0.000436073 CG34376 FBtr0112609 22460499 22460749 3R + 22460515 22460626 3'utr CG34376 FlyBase G44706.1 AAATAGCAGGTCAAATGACAGTTAAGTACAAAAGTGGAATGATTGCAATAATACTCAAATACACTAAAGACGGCGTAACCAAAACAATTCCAAAGAATTTAGTTAATACATA 54 22460602 0.889745512 6 53 297 0.983050847 1.462397998 0.06779661 0.074074074 0.152542373 54 0 1 58 3R:22460515-22460626 7 CG34376 FBtr0112609 22460499 22460749 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 22460567 22460630 3'utr CG34376 FlyBase G33775.1 ACTCAAATACACTAAAGACGGCGTAACCAAAACAATTCCAAAGAATTTAGTTAATACATAATAA 24 22460602 0.969706051 2 23 129 0.974358974 1.579783597 0 0.5 0.692307692 24 1 0 38 3R:22460567-22460630 7 31.5 1965 FBgn0085405 134.82 6.636666667 10.25333333 0.23364486 4.746358614 3.072171651 2 2 2 0.25 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 22460697 22460704 + 3R_22460697_22460704_+ 0.406760237 0.407397837 0.407079037 0.000450851 CG34376 FBtr0112609 22460499 22460749 3R + 22460672 22460727 3'utr CG34376 FlyBase G44707.1 TCGTTTTTATTATTGTACGTTGCATTAGCTTTACACTGTAATAAATGTTGAATTTG 13 22460696 0.913471599 2 11 128 0.882352941 0.698970004 0.588235294 0.230769231 0.411764706 13 0 2 15 3R:22460672-22460727 8 CG34376 FBtr0112609 22460499 22460749 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R + 22460670 22460712 3'utr CG34376 FlyBase G33776.1 TATCGTTTTTATTATTGTACGTTGCATTAGCTTTACACTGTAA 10 22460696 0.98369017 2 10 82 1 1.079181246 0.333333333 0.2 0.333333333 10 0 0 12 3R:22460670-22460712 8 10.5 1966 FBgn0085405 134.82 6.636666667 10.25333333 0.07788162 1.582119538 1.024057217 1 1 1 0.25 dme-miR-1006-3p 7mer-A1 GAATTTA 3R 22464083 22464089 + 3R_22464083_22464089_+ 0.801261235 0.790042918 0.795652077 0.007932536 AP-2mu FBtr0084253|FBtr0301866|FBtr0084252 22464039|22464039|22464039 22464603|22464603|22464603 3R + 22464068 22464106 5'utr AP-2mu FlyBase G44715.1 AAGATTATCACAATTGAATTTAACGAGATGAATGGAGAA 6 22464082 0.727082637 3 4 36 0.875 0.84509804 0.25 0.333333333 0.5 6 1 0 7 3R:22464068-22464106 7 AP-2mu FBtr0301866|FBtr0084252|FBtr0084253 22464039|22464039|22464039 22464603|22464603|22464603 GAATTTA 7mer-A1 dme-miR-1006-3p 3R + 22464048 22464098 5'utr AP-2mu FlyBase G33781.1 AAGCATCCCCATCACGGAGCAAGATTATCACAATTGAATTTAACGAGATGA 6 22464072 0.965656417 4 6 31 1 1.041392685 0.090909091 0.5 0.727272727 6 0 0 11 3R:22464048-22464098 7 5 1967 FBgn0263351 730.8 44.74666667 67.98333333 0.006841817 0.111740167 0.073547438 1 11 6 0.25 dme-miR-932-5p 7mer-A1 GAATTGA 3R 22608087 22608093 + 3R_22608087_22608093_+ 0.760573021 0.822710781 0.791641901 0.04393806 Efa6 FBtr0334560|FBtr0113396|FBtr0113395|FBtr0302187|FBtr0334559 22605937|22607217|22607217|22606893|22607217 22608471|22608471|22608471|22608842|22608471 3R + 22608024 22608122 3'utr Efa6 FlyBase G44766.1 AATGAACAATATCTCTACACAACCACAAGATGGAGAACATCGGCAGTAACAATAACGAAATGAGAATTGAGAAGAGGACAAGCGCATTAGCATTAAGCT 23 22608090 0.749156598 9 22 62 1 1.431363764 0.222222222 0.130434783 0.259259259 23 0 0 27 3R:22608024-22608122 7 Efa6 FBtr0113396|FBtr0113395|FBtr0302187|FBtr0334559|FBtr0334560 22607217|22607217|22606893|22607217|22605937 22608471|22608471|22608842|22608471|22608471 GAATTGA 7mer-A1 dme-miR-932-5p 3R + 22608076 22608107 3'utr Efa6 FlyBase G33821.1 TAACGAAATGAGAATTGAGAAGAGGACAAGCG 6 22608090 0.796929093 3 6 13 1 1 0.8 0.5 0.7 6 0 0 10 3R:22608076-22608107 7 8 1968 FBgn0051158 976.3733333 19.19333333 29.44333333 0.008193587 0.416811393 0.271708366 -3 -3 -3 0.25 dme-miR-1003-3p 6mer3-8 ATGTGA 3R 22608670 22608675 + 3R_22608670_22608675_+ 0.830693945 0.873741346 0.852217645 0.030439108 Efa6 FBtr0302187 22606893 22608842 3R + 22608632 22608719 3'utr Efa6 FlyBase G44769.1 AGGGAAACAAGAAGACGAACGTGGAGACGGTGATTTTTATGTGAACATTTATTACTAACTGATAAGCTTTGATTAAACTTAGGAAAGC 25 22608666 0.982650419 7 24 180 0.939393939 1.491361694 0 0.2 0.393939394 25 2 0 31 3R:22608632-22608719 6 Efa6 FBtr0302187 22606893 22608842 ATGTGA 6mer3-8 dme-miR-1003-3p 3R + 22608641 22608681 3'utr Efa6 FlyBase G33823.1 AGAAGACGAACGTGGAGACGGTGATTTTTATGTGAACATTT 15 22608667 0.902985717 4 15 101 1 1.278753601 0 0.266666667 0.421052632 15 0 0 19 3R:22608641-22608681 6 5 1969 FBgn0051158 976.3733333 19.19333333 29.44333333 0.005120992 0.260507121 0.169817729 4 3 3.5 0.25 dme-miR-14-3p 7mer-A1 AGACTGA 3R 22681901 22681907 + 3R_22681901_22681907_+ 0.507542525 0.554453114 0.530997819 0.033170803 wake FBtr0344409|FBtr0344403|FBtr0344405|FBtr0344407|FBtr0344408|FBtr0344406|FBtr0344404 22681578|22681578|22681578|22681578|22681578|22681578|22681578 22682176|22682176|22683827|22682176|22682176|22682176|22682176 3R + 22681880 22681923 3'utr wake FlyBase G44782.1 TCGTTGACCAATTCCAGAATTAGACTGAATTACTTATGTATGCT 170 22681899 0.842890564 7 166 1175 0.971962617 2.318063335 0.08411215 0.223529412 0.38317757 170 6 0 208 3R:22681880-22681923 7 wake FBtr0344408|FBtr0344406|FBtr0344404|FBtr0344409|FBtr0344403|FBtr0344405|FBtr0344407 22681578|22681578|22681578|22681578|22681578|22681578|22681578 22682176|22682176|22682176|22682176|22682176|22683827|22682176 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 22681879 22681941 3'utr wake FlyBase G33830.1 ATCGTTGACCAATTCCAGAATTAGACTGAATTACTTATGTATGCTGCAATGGCAAACTGATGA 104 22681899 0.980325128 7 101 715 0.981012658 1.889301703 0.139240506 0.375 0.588607595 104 2 1 155 3R:22681879-22681941 7 135.5 1970 FBgn0266418 402.2066667 8.453333333 12.89666667 0.336891482 16.02917981 10.50659085 2 2 2 0.25 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3R 22731169 22731174 + 3R_22731169_22731174_+ 0.908593345 0.86854479 0.888569067 0.028318566 CG45049 FBtr0344360|FBtr0344361|FBtr0344359 22730106|22730106|22730106 22732362|22732362|22732362 3R + 22731144 22731188 3'utr CG45049 FlyBase G44806.1 CGCAACTGACAGCAATAAAAACGTTTTTGACACCTTTTGTTAACA 14 22731170 0.648597243 5 11 94 0.8 1.079181246 0 0.071428571 0.133333333 14 3 0 12 3R:22731144-22731188 6 CG45049 FBtr0344360|FBtr0344359|FBtr0344361 22730106|22730106|22730106 22732362|22732362|22732362 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3R + 22731132 22731183 3'utr CG45049 FlyBase G33849.1 AAACATATCACACGCAACTGACAGCAATAAAAACGTTTTTGACACCTTTTGT 7 22731159 0.984734749 4 6 45 0.777777778 0.84509804 0.111111111 0.285714286 0.444444444 7 2 0 7 3R:22731132-22731183 6 9.5 1971 FBgn0266409 707.48 41.45666667 63.71333333 0.013427941 0.229154941 0.149105368 -1 10 4.5 0.25 dme-miR-305-5p 7mer-A1 GTACAAA 3R 22734034 22734040 - 3R_22734034_22734040_- 0.601749336 0.594885964 0.59831765 0.004853086 Dcr-1 FBtr0084324 22734005 22734108 3R - 22734027 22734064 3'utr Dcr-1 FlyBase G53522.1 TTTTTAGACATAAGAACTTTAATTGTACAAATCTTAAA 11 22734042 0.759029527 3 11 110 1 1.041392685 0 0 0 11 0 0 11 3R:22734027-22734064 7 Dcr-1 FBtr0084324 22734005 22734108 GTACAAA 7mer-A1 dme-miR-305-5p 3R - 22734006 22734064 3'utr Dcr-1 FlyBase G40449.1 TTTTTAGACATAAGAACTTTAATTGTACAAATCTTAAATAGATTGTCTATGGTCGAATA 14 22734042 0.985401633 5 14 130 1 1.301029996 0 0.285714286 0.5 14 0 0 20 3R:22734006-22734064 7 11.5 1972 FBgn0039016 718.3333333 12.47 19.05666667 0.016009281 0.922213312 0.603463355 2 2 2 0.25 dme-miR-92b-3p 6mer2-7 TGCAAT 3R 22734092 22734097 - 3R_22734092_22734097_- 0.531344728 0.630329625 0.580837176 0.069992894 Dcr-1 FBtr0084324 22734005 22734108 3R - 22734068 22734137 stop_codon Dcr-1 FlyBase G53523.1 AGCAGGGCTTGATAGCCAAAAAAGACTAAGAAGTCATCGCTGCAATCGTGTTTCATTAGATTTAATGATT 18 22734086 0.920577005 8 17 146 0.95 1.278753601 0.2 0.055555556 0.15 18 1 0 19 3R:22734068-22734137 6 Dcr-1 FBtr0084324 22734005 22734108 TGCAAT 6mer2-7 dme-miR-92b-3p 3R - 22734068 22734181 stop_codon Dcr-1 FlyBase G40450.1 TGCCAAGTGCACGGCGGCCAAATGCGCATTGCGCCAACTCAAAAAGCAGGGCTTGATAGCCAAAAAAGACTAAGAAGTCATCGCTGCAATCGTGTTTCATTAGATTTAATGATT 19 22734083 0.986918323 8 16 138 0.807692308 0.720159303 0.153846154 0.315789474 0.5 19 2 3 21 3R:22734068-22734181 6 10 1973 FBgn0039016 718.3333333 12.47 19.05666667 0.013921114 0.801924619 0.524750743 -11 -14 -12.5 0.25 dme-miR-305-5p 7mer-A1 GTACAAA 3R 23049704 23049710 - 3R_23049704_23049710_- 0.780635047 0.782553431 0.781594239 0.001356514 p53 FBtr0345262|FBtr0084360|FBtr0301765|FBtr0084359 23049655|23049655|23049655|23049655 23049964|23049964|23049964|23049964 3R - 23049682 23049726 3'utr p53 FlyBase G53557.1 ACAACAAACATACTCTGTACAAAAAAGCCAAAAGTGAATTTATTA 11 23049712 0.724762631 4 11 37 1 1.041392685 0 0 0 11 0 0 11 3R:23049682-23049726 7 p53 FBtr0301765|FBtr0084359|FBtr0345262|FBtr0084360 23049655|23049655|23049655|23049655 23049964|23049964|23049964|23049964 GTACAAA 7mer-A1 dme-miR-305-5p 3R - 23049664 23049726 3'utr p53 FlyBase G40468.1 ACAACAAACATACTCTGTACAAAAAAGCCAAAAGTGAATTTATTAAAGAGTTGTCATATTTTG 8 23049712 0.936389874 6 8 31 1 1.041392685 0.181818182 0.25 0.454545455 8 0 0 11 3R:23049664-23049726 7 7.5 1974 FBgn0039044 93.11333333 6.436666667 9.84 0.080547004 1.165199379 0.762195122 2 2 2 0.25 dme-miR-283-5p 7mer-m8 TGATATT 3R 23049831 23049837 - 3R_23049831_23049837_- 0.618803886 0.600305157 0.609554521 0.013080556 p53 FBtr0345262|FBtr0084360|FBtr0301765|FBtr0084359 23049655|23049655|23049655|23049655 23049964|23049964|23049964|23049964 3R - 23049797 23049986 stop_codon p53 FlyBase G53559.1 ACGTGCCTACGAGCTGCCATGACTTCTGATCTGGTCGACAATCTCCCAGGTATCAGATACCTTTGAAATGTGTTGCATCTGTGGGGTATACTACATAGCTATTAGTATCTTAAGTTTGTATTAGTCCTTGTTCGTAAGGCGTTTAACGGTGATATTCCCCTTTTGGCATGTTCGATGGCCGAAAAGAAAA 127 23049832 0.976635608 29 120 1008 0.957055215 1.716003344 0.233128834 0.204724409 0.380368098 127 5 2 156 3R:23049797-23049986 7 p53 FBtr0301765|FBtr0084359|FBtr0345262|FBtr0084360 23049655|23049655|23049655|23049655 23049964|23049964|23049964|23049964 TGATATT 7mer-m8 dme-miR-283-5p 3R - 23049819 23049918 3'utr p53 FlyBase G40469.1 TGTGTTGCATCTGTGGGGTATACTACATAGCTATTAGTATCTTAAGTTTGTATTAGTCCTTGTTCGTAAGGCGTTTAACGGTGATATTCCCCTTTTGGCA 52 23049832 0.742390358 13 49 419 0.921052632 1.544068044 0.223684211 0.346153846 0.552631579 52 5 1 70 3R:23049819-23049918 7 56.5 1975 FBgn0039044 93.11333333 6.436666667 9.84 0.606787428 8.777835318 5.741869919 -5 -5 -5 0.25 dme-miR-14-3p 6mer3-8 AAGACT 3R 23114369 23114374 - 3R_23114369_23114374_- 0.996275304 0.999178464 0.997726884 0.002052872 Rassf FBtr0084407 23114012 23114672 3R - 23114347 23114394 3'utr Rassf FlyBase G53574.1 CATTCGTTTAGAAAGCGTTTAAGACTTGTAACTAACCAAAAAATAATT 14 23114376 0.980246234 4 13 96 0.947368421 1.255272505 0.157894737 0.214285714 0.421052632 14 1 0 18 3R:23114347-23114394 6 Rassf FBtr0084407 23114012 23114672 AAGACT 6mer3-8 dme-miR-14-3p 3R - 23114323 23114409 3'utr Rassf FlyBase G40479.1 AATTCCAGGCATTTCCATTCGTTTAGAAAGCGTTTAAGACTTGTAACTAACCAAAAAATAATTATTAATCCACAACATTACCATACA 19 23114376 0.98397587 8 18 138 0.964285714 1.130333768 0.178571429 0.421052632 0.607142857 19 0 1 27 3R:23114323-23114409 6 15 1976 FBgn0039055 618.9666667 21.53666667 33.01666667 0.024233938 0.696486612 0.454316002 2 2 2 0.25 dme-miR-305-5p 7mer-m1 GTACAAT 3R 23123990 23123996 - 3R_23123990_23123996_- 0.701128286 0.749724517 0.725426401 0.034362703 CG31365 FBtr0084406 23123960 23124296 3R - 23123971 23124006 3'utr CG31365 FlyBase G53587.1 ATAAGACGATGTACAATTTTATAGGCAAATATACGT 5 23123997 0.976482437 3 5 32 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:23123971-23124006 7 CG31365 FBtr0084406 23123960 23124296 GTACAAT 7mer-m1 dme-miR-305-5p 3R - 23123971 23124014 3'utr CG31365 FlyBase G40491.1 AATACCACATAAGACGATGTACAATTTTATAGGCAAATATACGT 13 23123990 0.633657946 4 11 86 0.75 1.176091259 0 0.461538462 0.65 13 5 0 15 3R:23123971-23124014 7 8.5 1977 FBgn0051365 445.6766667 23.35333333 35.95666667 0.019072123 0.363973737 0.236395661 1 -6 -2.5 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3R 23151617 23151623 - 3R_23151617_23151623_- 0.408733874 0.440917435 0.424825655 0.022757171 unk FBtr0084402|FBtr0305573|FBtr0337052 23151562|23150239|23149651 23153939|23153939|23153939 3R - 23151574 23151647 3'utr unk FlyBase G53602.1 ACGCTACTGTAAGAGTGATTTTTATGTGATTTTGAAACTACTTGAATATGTGATCCAGAAATATATAAAAAACA 18 23151628 0.971416864 8 18 158 1 1.342422681 0.363636364 0.222222222 0.363636364 18 0 0 22 3R:23151574-23151647 7 unk FBtr0305573|FBtr0337052|FBtr0084402 23150239|23149651|23151562 23153939|23153939|23153939 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 23151611 23151647 3'utr unk FlyBase G40506.1 ACGCTACTGTAAGAGTGATTTTTATGTGATTTTGAAA 16 23151616 0.775366016 7 14 167 0.896551724 1.113943352 0.275862069 0.625 0.793103448 16 2 1 26 3R:23151611-23151647 7 9 1978 FBgn0004395 913.0833333 29.83666667 45.42666667 0.009856713 0.301642275 0.198121515 5 -7 -1 0.25 dme-miR-8-3p 6mer2-7 AGTATT 3R 23152636 23152641 - 3R_23152636_23152641_- 0.992966204 0.861952579 0.927459391 0.092640605 unk FBtr0305572|FBtr0084402|FBtr0305571|FBtr0305573|FBtr0337052 23152090|23151562|23152090|23150239|23149651 23153939|23153939|23153939|23153939|23153939 3R - 23152630 23152714 3'utr unk FlyBase G53606.1 TTTACTTTCATAGTCTCAACTGGACGCTTCCAAATTAGTAAAAGCATAAAATGAATCGTCAATGTCAAAACGTAGTATTTAAGTC 10 23152663 0.952063577 8 9 73 1 1.079181246 0 0.2 0.333333333 10 0 0 12 3R:23152630-23152714 6 unk FBtr0305573|FBtr0337052|FBtr0305571|FBtr0305572|FBtr0084402 23150239|23149651|23152090|23152090|23151562 23153939|23153939|23153939|23153939|23153939 AGTATT 6mer2-7 dme-miR-8-3p 3R - 23152630 23152672 3'utr unk FlyBase G40509.1 AGCATAAAATGAATCGTCAATGTCAAAACGTAGTATTTAAGTC 5 23152635 0.962851323 4 5 28 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:23152630-23152672 6 3 1979 FBgn0004395 913.0833333 29.83666667 45.42666667 0.003285571 0.100547425 0.066040505 22 -6 8 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3R 23152762 23152768 - 3R_23152762_23152768_- 0.513788546 0.517521287 0.515654916 0.002639488 unk FBtr0305572|FBtr0084402|FBtr0305571|FBtr0305573|FBtr0337052 23152090|23151562|23152090|23150239|23149651 23153939|23153939|23153939|23153939|23153939 3R - 23152725 23152793 3'utr unk FlyBase G53607.1 ACGTATATAATCTATTAGGTTACTTTGTGATTTGAATAGTGCTTTAAGTACTTACTTTGCAGATGACTT 63 23152762 0.992289151 12 60 681 0.952941176 1.306425028 0.082352941 0.253968254 0.447058824 63 1 3 81 3R:23152725-23152793 7 unk FBtr0305573|FBtr0337052|FBtr0305571|FBtr0305572|FBtr0084402 23150239|23149651|23152090|23152090|23151562 23153939|23153939|23153939|23153939|23153939 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 23152728 23152793 3'utr unk FlyBase G40511.1 ACGTATATAATCTATTAGGTTACTTTGTGATTTGAATAGTGCTTTAAGTACTTACTTTGCAGATGA 47 23152762 0.991115233 9 45 476 0.97260274 1.550228353 0.054794521 0.340425532 0.575342466 47 1 1 71 3R:23152728-23152793 7 53.5 1980 FBgn0004395 913.0833333 29.83666667 45.42666667 0.05859268 1.793095743 1.177722336 -6 -6 -6 0.25 dme-miR-283-5p 8mer-A1 TGATATTA 3R 23185294 23185301 + 3R_23185294_23185301_+ 0.453130837 0.436921452 0.445026145 0.011461706 Irk1 FBtr0336479|FBtr0336475|FBtr0336478|FBtr0336476|FBtr0336474|FBtr0336473|FBtr0336477 23184958|23184958|23184958|23184958|23184958|23184958|23184958 23185642|23185562|23185642|23185562|23185642|23185642|23185642 3R + 23185091 23185409 3'utr Irk1 FlyBase G44901.1 GAGCTGCTGCAGCTGTGAACATCCCTCAAAAAAATCCCCCTATCCTGCTGAAGTGGAGGCAATCTGATTGTTATCCACCTATCTACTATACTTACTACTAACCCTGAAACGATTGTACATGTTTATGTCTAGGCTAAGCTGATGAATGATTCACGTTGTTAGCTTTAGCTTTGTGTTGAATTTACTATAGTTAAGTTACAAATTGATATTAACGCAAAGTAAGATGTGAGACCCAGAAACCAAAATGCTGCAACTTAGACAACTAGATAAGTCATTAAACGGCTCACTTAACATGAAATTTATGCGAAGACGCAGCGGA 424 23185293 0.979824116 55 406 2960 0.951219512 1.859909919 0.234521576 0.198113208 0.362101313 424 20 6 507 3R:23185091-23185409 8 Irk1 FBtr0336474|FBtr0336473|FBtr0336477|FBtr0336479|FBtr0336475|FBtr0336478|FBtr0336476 23184958|23184958|23184958|23184958|23184958|23184958|23184958 23185642|23185642|23185642|23185642|23185562|23185642|23185562 TGATATTA 8mer-A1 dme-miR-283-5p 3R + 23185172 23185369 3'utr Irk1 FlyBase G33921.2 TCTACTATACTTACTACTAACCCTGAAACGATTGTACATGTTTATGTCTAGGCTAAGCTGATGAATGATTCACGTTGTTAGCTTTAGCTTTGTGTTGAATTTACTATAGTTAAGTTACAAATTGATATTAACGCAAAGTAAGATGTGAGACCCAGAAACCAAAATGCTGCAACTTAGACAACTAGATAAGTCATTAAA 206 23185293 0.976004611 35 197 1511 0.961805556 1.965358514 0.239583333 0.291262136 0.493055556 206 9 2 277 3R:23185172-23185369 8 120 1981 FBgn0265042 1730.336667 66.08666667 101.7066667 0.069350666 1.815797438 1.17986366 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 23187025 23187031 - 3R_23187025_23187031_- 0.483181839 0.479289941 0.48123589 0.002751989 cnc FBtr0306755|FBtr0306755|FBtr0306755|FBtr0308226|FBtr0308226|FBtr0308226|FBtr0330372|FBtr0330372|FBtr0330372|FBtr0306744|FBtr0306744|FBtr0306744|FBtr0306747|FBtr0306747|FBtr0306747|FBtr0308227|FBtr0308227|FBtr0308227|FBtr0306752|FBtr0306752|FBtr0306752|FBtr0306754|FBtr0306754|FBtr0306754|FBtr0306751|FBtr0306751|FBtr0306751|FBtr0306749|FBtr0306749|FBtr0306749|FBtr0306745|FBtr0306745|FBtr0306745|FBtr0306746|FBtr0306746|FBtr0306746|FBtr0336455|FBtr0336455|FBtr0336455|FBtr0306750|FBtr0306750|FBtr0306750|FBtr0306748|FBtr0306748|FBtr0306748|FBtr0306753|FBtr0306753|FBtr0306753 23185578|23185578|23185578|23186410|23186410|23186410|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23186410|23186410|23186410|23186410|23186410|23186410|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578 23187443|23187443|23187443|23187443|23187443|23187443|23187302|23187302|23187302|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443 3R - 23186980 23187085 3'utr cnc FlyBase G53625.1 TGGACAGCGTATGCGAAGCCTTTTACTTAATTGCAATTAATGAAAAACAAAACTTGTGATAAAACAGCTCTTTTACTCCGAAATATTTGCGCCCCAAAGGTCAAGC 77 23187032 0.856437025 8 72 370 0.954022989 1.618048097 0.103448276 0.12987013 0.229885057 77 3 1 83 3R:23186980-23187085 7 cnc FBtr0306751|FBtr0306751|FBtr0306751|FBtr0336455|FBtr0336455|FBtr0336455|FBtr0306748|FBtr0306748|FBtr0306748|FBtr0306746|FBtr0306746|FBtr0306746|FBtr0306752|FBtr0306752|FBtr0306752|FBtr0306750|FBtr0306750|FBtr0306750|FBtr0306754|FBtr0306754|FBtr0306754|FBtr0306749|FBtr0306749|FBtr0306749|FBtr0306745|FBtr0306745|FBtr0306745|FBtr0306753|FBtr0306753|FBtr0306753|FBtr0306747|FBtr0306747|FBtr0306747|FBtr0308226|FBtr0308226|FBtr0308226|FBtr0306744|FBtr0306744|FBtr0306744|FBtr0308227|FBtr0308227|FBtr0308227|FBtr0306755|FBtr0306755|FBtr0306755|FBtr0330372|FBtr0330372|FBtr0330372 23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23186410|23186410|23186410|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23185578|23186410|23186410|23186410|23185578|23185578|23185578|23186410|23186410|23186410|23185578|23185578|23185578|23185578|23185578|23185578 23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187443|23187302|23187302|23187302 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 23186975 23187133 3'utr cnc FlyBase G40531.1 TGATTATTTGGACTCGTCCAAGTCCGTCTTGCATGGTGTTGTCCCTTCTGGACAGCGTATGCGAAGCCTTTTACTTAATTGCAATTAATGAAAAACAAAACTTGTGATAAAACAGCTCTTTTACTCCGAAATATTTGCGCCCCAAAGGTCAAGCTGACA 59 23187032 0.966387214 14 57 307 0.975308642 1.596597096 0.098765432 0.322033898 0.50617284 59 1 1 79 3R:23186975-23187133 7 53.5 1982 FBgn0262975 1286.603333 24.08333333 36.96666667 0.041582358 2.221453287 1.447249775 1 1 1 0.25 dme-miR-12-5p 7mer-A1 ATACTCA 3R 23254478 23254484 + 3R_23254478_23254484_+ 0.542898014 0.581811693 0.562354853 0.027516141 EloA FBtr0084374|FBtr0084375 23254447|23254447 23255071|23255071 3R + 23254447 23254564 stop_codon EloA FlyBase G44911.1 AGATGCGCTTACTCATTATAGCTACAATCTTATACTCAACTTCTTCAGCGACAACTTAAGCAGCAGCAGTAGCAGCAACCTCGATCTATTAGGCATTCACGGTGGGATTACCTTCCAA 42 23254476 0.978661593 11 41 287 0.97826087 1.653212514 0.195652174 0.095238095 0.173913043 42 1 0 45 3R:23254447-23254564 7 EloA FBtr0084374|FBtr0084375 23254447|23254447 23255071|23255071 ATACTCA 7mer-A1 dme-miR-12-5p 3R + 23254441 23254565 stop_codon EloA FlyBase G33929.1 AACGATAGATGCGCTTACTCATTATAGCTACAATCTTATACTCAACTTCTTCAGCGACAACTTAAGCAGCAGCAGTAGCAGCAACCTCGATCTATTAGGCATTCACGGTGGGATTACCTTCCAAC 30 23254476 0.982136022 9 27 196 0.916666667 1.166331422 0.125 0.4 0.625 30 2 2 44 3R:23254441-23254565 7 20 1983 FBgn0039066 571.72 24.26333333 37.16333333 0.034982159 0.824289051 0.538164858 2 2 2 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 23254605 23254611 + 3R_23254605_23254611_+ 0.80047776 0.797738172 0.799107966 0.00193719 EloA FBtr0084374|FBtr0084374|FBtr0084374|FBtr0084375|FBtr0084375|FBtr0084375 23254447|23254447|23254447|23254447|23254447|23254447 23255071|23255071|23255071|23255071|23255071|23255071 3R + 23254588 23254644 3'utr EloA FlyBase G44912.1 TCTGAATAAAGTGACATTGTGATACTAGACCTTCTACTTCCCAGTGCGCTGTGGAAT 30 23254604 0.652152423 5 28 193 0.918918919 1.054357662 0.135135135 0.133333333 0.297297297 30 1 2 34 3R:23254588-23254644 7 EloA FBtr0084374|FBtr0084374|FBtr0084374|FBtr0084375|FBtr0084375|FBtr0084375 23254447|23254447|23254447|23254447|23254447|23254447 23255071|23255071|23255071|23255071|23255071|23255071 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 23254584 23254634 3'utr EloA FlyBase G33930.1 CAGGTCTGAATAAAGTGACATTGTGATACTAGACCTTCTACTTCCCAGTGC 26 23254604 0.666304242 6 26 170 1 1.62324929 0.095238095 0.384615385 0.619047619 26 0 0 42 3R:23254584-23254634 7 26 1984 FBgn0039066 571.72 24.26333333 37.16333333 0.045476807 1.071575766 0.699614315 1 1 1 0.25 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 23255452 23255457 - 3R_23255452_23255457_- 0.97549776 0.99563186 0.98556481 0.014236959 wda FBtr0084387 23255068 23255493 3R - 23255434 23255480 3'utr wda FlyBase G53644.1 AAGTTCAGCCCGAATTTAGACTTTCTAGTGACGACTTATGTTTGAAA 34 23255464 0.691882377 9 33 263 0.951219512 1.113943352 0.195121951 0.205882353 0.341463415 34 0 2 39 3R:23255434-23255480 6 wda FBtr0084387 23255068 23255493 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R - 23255426 23255479 3'utr wda FlyBase G40547.1 AGTTCAGCCCGAATTTAGACTTTCTAGTGACGACTTATGTTTGAAAATAATTTA 18 23255459 0.965605775 6 17 141 0.954545455 1.021189299 0.045454545 0.222222222 0.363636364 18 0 1 21 3R:23255426-23255479 6 26 1985 FBgn0039067 161 7.11 10.86333333 0.161490683 3.656821378 2.3933722 7 2 4.5 0.25 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3R 23263542 23263548 - 3R_23263542_23263548_- 0.545122352 0.617252814 0.581187583 0.051003895 orb FBtr0334498 23260608 23265852 3R - 23263525 23263562 3'utr orb FlyBase G53650.1 TTATACAGATAAAATGGTGCTTTAGCTGAATTATTAGT 15 23263541 0.652886182 3 15 115 1 1.204119983 0.0625 0.066666667 0.125 15 0 0 16 3R:23263525-23263562 7 orb FBtr0334498 23260608 23265852 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3R - 23263527 23263562 3'utr orb FlyBase G40552.1 TTATACAGATAAAATGGTGCTTTAGCTGAATTATTA 10 23263548 0.778724095 3 9 78 0.941176471 1.204119983 0.176470588 0.5 0.705882353 10 1 0 16 3R:23263527-23263562 7 12.5 1986 FBgn0004882 75.63666667 1.15 1.746666667 0.165263761 10.86956522 7.15648855 -7 0 -3.5 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 23605903 23605908 - 3R_23605903_23605908_- 0.936906999 0.944491362 0.94069918 0.005362981 CG31145 FBtr0290056|FBtr0336459 23605749|23605749 23606850|23606850 3R - 23605824 23605930 3'utr CG31145 FlyBase G53713.1 ATTATTGTAACGTTTTTCAATTGTACCTTGAGTGGTTGAGATAGAGATCATTGATTGGCCAAGAAAAGAAAAAGTGACAGGTGAATTGAGTGTGAAAACTATGAGAA 123 23605909 0.824246802 19 117 1115 0.953642384 2.158362492 0.21192053 0.195121951 0.344370861 123 7 0 144 3R:23605824-23605930 6 CG31145 FBtr0336459|FBtr0290056 23605749|23605749 23606850|23606850 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 23605873 23605925 3'utr CG31145 FlyBase G40604.1 TGTAACGTTTTTCAATTGTACCTTGAGTGGTTGAGATAGAGATCATTGATTGG 61 23605909 0.792026983 6 58 586 0.947916667 1.959041392 0.239583333 0.409836066 0.625 61 5 0 91 3R:23605873-23605925 6 81 1987 FBgn0051145 14.00333333 0.44 0.683333333 5.784337063 184.0909091 118.5365854 1 1 1 0.25 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 23606086 23606093 - 3R_23606086_23606093_- 0.577464468 0.594762473 0.58611347 0.012231533 CG31145 FBtr0290056|FBtr0336459 23605749|23605749 23606850|23606850 3R - 23606057 23606154 3'utr CG31145 FlyBase G53715.1 AAGAAAAGTTGTTGCAAGTTTAGTTCGTAAGTTGACCTAACATTATGATCGATATCAGGCGTAGCTTTATCCGATTCAAGGATCGTCTTATTAGTTAG 25 23606109 0.991081207 11 21 218 0.870967742 1.431363764 0.161290323 0.2 0.35483871 25 4 0 27 3R:23606057-23606154 8 CG31145 FBtr0336459|FBtr0290056 23605749|23605749 23606850|23606850 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R - 23606058 23606137 3'utr CG31145 FlyBase G40606.1 GTTTAGTTCGTAAGTTGACCTAACATTATGATCGATATCAGGCGTAGCTTTATCCGATTCAAGGATCGTCTTATTAGTTA 17 23606088 0.88962346 11 16 122 0.875 1.322219295 0.416666667 0.352941176 0.541666667 17 3 0 21 3R:23606058-23606137 8 10 1988 FBgn0051145 14.00333333 0.44 0.683333333 0.714115687 22.72727273 14.63414634 16 -5 5.5 0.25 dme-miR-190-5p 6mer3-8 ACATAT 3R 23606215 23606220 - 3R_23606215_23606220_- 0.977241165 0.787174481 0.882207823 0.134397452 CG31145 FBtr0290056|FBtr0336459 23605749|23605749 23606850|23606850 3R - 23606200 23606240 3'utr CG31145 FlyBase G53716.1 GCATACATTTTATGACTTTTACATATACACTTTTGCATACA 20 23606222 0.722443994 6 18 196 0.888888889 1.380211242 0.037037037 0.25 0.444444444 20 3 0 24 3R:23606200-23606240 6 CG31145 FBtr0336459|FBtr0290056 23605749|23605749 23606850|23606850 ACATAT 6mer3-8 dme-miR-190-5p 3R - 23606206 23606234 3'utr CG31145 FlyBase G40607.1 ATTTTATGACTTTTACATATACACTTTTG 11 23606222 0.757130274 2 11 112 1 1.146128036 0 0.272727273 0.428571429 11 0 0 14 3R:23606206-23606234 6 15.5 1989 FBgn0051145 14.00333333 0.44 0.683333333 1.106879314 35.22727273 22.68292683 2 2 2 0.25 dme-miR-318-3p 8mer-A1 CCCAGTGA 3R 23712878 23712885 - 3R_23712878_23712885_- 0.674060453 0.668887449 0.671473951 0.003657934 nau FBtr0301445|FBtr0084472 23712812|23712812 23712945|23712945 3R - 23712822 23712919 3'utr nau FlyBase G53743.1 TTGTAAAGCTATTTTTAAGAGGATACACGAGATACCCAGTGACCCGAATAGGCCTTAAATTATTTGTATAGCATTAGAACTTAATTAAATGGTAATTC 48 23712880 0.948735073 10 48 213 1 1.73239376 0.37037037 0.083333333 0.185185185 48 0 0 54 3R:23712822-23712919 8 nau FBtr0301445|FBtr0084472 23712812|23712812 23712945|23712945 CCCAGTGA 8mer-A1 dme-miR-318-3p 3R - 23712859 23712903 3'utr nau FlyBase G40621.1 AAGAGGATACACGAGATACCCAGTGACCCGAATAGGCCTTAAATT 30 23712880 0.958694621 3 30 94 1 1.62324929 0.547619048 0.333333333 0.523809524 30 0 0 42 3R:23712859-23712903 8 35 1990 FBgn0002922 0 0 0 Inf Inf Inf -5 -5 -5 0.25 dme-miR-965-3p 7mer-m8 TACGCTT 3R 23751032 23751038 - 3R_23751032_23751038_- 0.449153911 0.395951111 0.422552511 0.037620061 RanBP3 FBtr0084468|FBtr0335003 23750935|23750935 23751241|23751241 3R - 23751016 23751096 3'utr RanBP3 FlyBase G53777.1 TAAATGAAGTGCTGATTTGTAAACCCGTGAGCAGCGTCGACAAAAGACATTTATCCATTACGCTTTGTGTTTATAATTTTT 43 23751039 0.816579694 9 42 443 0.97826087 1.653212514 0.130434783 0.069767442 0.130434783 43 1 0 45 3R:23751016-23751096 7 RanBP3 FBtr0084468|FBtr0335003 23750935|23750935 23751241|23751241 TACGCTT 7mer-m8 dme-miR-965-3p 3R - 23751010 23751053 3'utr RanBP3 FlyBase G40651.1 AAGACATTTATCCATTACGCTTTGTGTTTATAATTTTTTGTTAA 31 23751039 0.806933956 6 30 375 0.975609756 1.602059991 0.048780488 0.258064516 0.43902439 31 1 0 40 3R:23751010-23751053 7 33 1991 FBgn0039110 582.3333333 40.28333333 61.80666667 0.056668575 0.819197352 0.533922986 1 1 1 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 23809228 23809234 - 3R_23809228_23809234_- 0.814776907 0.814645648 0.814711278 9.28E-05 eIF4G2 FBtr0344335 23808283 23810293 3R - 23809202 23809282 5'utr eIF4G2 FlyBase G53863.1 AAAATTCGTAAAGACATGTAAAGTATTTAGCACACAAAGCATGATTATCCAAAGATAAATCTTAAAATTAGCTGTAAAAAG 47 23809238 0.694930987 13 42 273 0.890909091 1.69019608 0.036363636 0.14893617 0.272727273 47 6 0 49 3R:23809202-23809282 7 eIF4G2 FBtr0344335 23808283 23810293 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 23809207 23809270 5'utr eIF4G2 FlyBase G40707.1 GACATGTAAAGTATTTAGCACACAAAGCATGATTATCCAAAGATAAATCTTAAAATTAGCTGTA 23 23809238 0.982911985 8 18 143 0.84375 1.431363764 0.03125 0.304347826 0.5 23 5 0 27 3R:23809207-23809270 7 26 1992 FBgn0260634 1847.216667 30.65 47.06666667 0.01407523 0.848287113 0.552407932 4 4 4 0.25 dme-miR-305-5p 8mer-A1 AGTACAAA 3R 23809542 23809549 - 3R_23809542_23809549_- 0.599887603 0.600093186 0.599990395 0.000145381 eIF4G2 FBtr0344335 23808283 23810293 3R - 23809465 23809594 5'utr eIF4G2 FlyBase G53865.1 ATACTTTTCTAGACTTTAAACAGAATTTTGTTTATTTTACCTTTCAGTACAAAGCATTATGAACTTCGTTTTGTTTGATTTTTTATAAAGAACTACCAACATTGATTTACCTATTTTCTATGCGAATGGC 83 23809551 0.987385384 12 80 715 0.970588235 1.694605199 0.029411765 0.192771084 0.343137255 83 2 1 99 3R:23809465-23809594 8 eIF4G2 FBtr0344335 23808283 23810293 AGTACAAA 8mer-A1 dme-miR-305-5p 3R - 23809518 23809592 5'utr eIF4G2 FlyBase G40709.1 ACTTTTCTAGACTTTAAACAGAATTTTGTTTATTTTACCTTTCAGTACAAAGCATTATGAACTTCGTTTTGTTTG 44 23809552 0.988108518 8 40 370 0.918032787 1.447158031 0.016393443 0.295454545 0.491803279 44 4 1 56 3R:23809518-23809592 8 57.5 1993 FBgn0260634 1847.216667 30.65 47.06666667 0.031127913 1.876019576 1.221671388 2 3 2.5 0.25 dme-miR-190-5p 6mer3-8 ACATAT 3R 23809684 23809689 - 3R_23809684_23809689_- 0.972984671 0.85581841 0.91440154 0.082849085 eIF4G2 FBtr0344335 23808283 23810293 3R - 23809634 23809802 5'utr eIF4G2 FlyBase G53866.1 GCAAAACTATGTAAAACTGAACCTACGATGCCGAAAAATATTTTGAAGAAATCAAATTCTGACAATGCCTTACCCAATGTGAACTGGGTATAGAAATATATTTATGTATATTTACATATGGACTATTAATTTTTGTAAACTCACAGTATTTCGTTAAACATTAAAATTA 126 23809684 0.919760887 28 119 1100 0.947712418 1.684246748 0.104575163 0.174603175 0.320261438 126 6 2 145 3R:23809634-23809802 6 eIF4G2 FBtr0344335 23808283 23810293 ACATAT 6mer3-8 dme-miR-190-5p 3R - 23809635 23809708 5'utr eIF4G2 FlyBase G40710.1 AATATATTTATGTATATTTACATATGGACTATTAATTTTTGTAAACTCACAGTATTTCGTTAAACATTAAAATT 54 23809684 0.83319595 10 51 541 0.93902439 1.58546073 0.048780488 0.462962963 0.646341463 54 4 1 77 3R:23809635-23809708 6 57.5 1994 FBgn0260634 1847.216667 30.65 47.06666667 0.031127913 1.876019576 1.221671388 -5 -5 -5 0.25 dme-miR-252-5p 6mer3-8 GTACTT 3R 23926479 23926484 - 3R_23926479_23926484_- 0.998862261 0.934335225 0.966598743 0.04562755 CG13601 FBtr0084522|FBtr0330369 23926370|23926370 23926628|23926562 3R - 23926478 23926590 stop_codon CG13601 FlyBase G53920.1 GATGGCAGTGGCGATGGAGGAACAGTAAGGCCGCCCGCTTGTACACATTCAACCTGCAGACCATTTCATCAGTGCTAGTTATGATCAAATCGCGTGTTACCATTTCGTACTTT 16 23926495 0.948123452 10 15 96 0.95 0.977723605 0.2 0.125 0.3 16 0 1 19 3R:23926478-23926590 6 CG13601 FBtr0330369|FBtr0084522 23926370|23926370 23926562|23926628 GTACTT 6mer3-8 dme-miR-252-5p 3R - 23926473 23926533 3'utr CG13601 FlyBase G40741.1 AGACCATTTCATCAGTGCTAGTTATGATCAAATCGCGTGTTACCATTTCGTACTTTAAGTA 12 23926509 0.718262507 7 11 91 0.947368421 1.255272505 0.052631579 0.5 0.684210526 12 1 0 18 3R:23926473-23926533 6 3 1995 FBgn0039126 158.33 17.96666667 27.49333333 0.018947767 0.166975881 0.109117362 11 25 18 0.25 dme-miR-1007-3p 7mer-A1 GAGCTTA 3R 23936122 23936128 - 3R_23936122_23936128_- 0.709336673 0.820870036 0.765103355 0.078865953 Gdh FBtr0089497|FBtr0335205|FBtr0089498|FBtr0089496 23935956|23935956|23935956|23935956 23936373|23936373|23936373|23936373 3R - 23935999 23936144 3'utr Gdh FlyBase G53934.1 AAGTTGAACAAGTTGCGAGCTTATTATTGTTGATTTTCTGTAATTTTTAAGTTAATGAGCGTCAAAGTGAAGCAATTGCATTTTCAATTATGTATCGCAACGTCTCGTACCGTCAAGTCACGTTTATCGTACGATCGCTCCGTTGC 51 23936118 0.989068525 16 47 447 0.935483871 1.286306739 0.403225806 0.156862745 0.306451613 51 2 2 58 3R:23935999-23936144 7 Gdh FBtr0089498|FBtr0089496|FBtr0089497|FBtr0335205 23935956|23935956|23935956|23935956 23936373|23936373|23936373|23936373 GAGCTTA 7mer-A1 dme-miR-1007-3p 3R - 23936107 23936172 3'utr Gdh FlyBase G40749.1 AAGCGAACTTTCGCCCGTGTTTCGTATTAAGTTGAACAAGTTGCGAGCTTATTATTGTTGATTTTC 17 23936118 0.811802963 5 16 152 0.903225806 1.447158031 0.322580645 0.529411765 0.741935484 17 3 0 28 3R:23936107-23936172 7 17 1996 FBgn0001098 137.9033333 7.62 11.54666667 0.123274758 2.230971129 1.472286374 -10 -10 -10 0.25 dme-miR-999-3p 6mer3-8 AGTTAA 3R 23936329 23936334 - 3R_23936329_23936334_- 0.832470031 0.565255295 0.698862663 0.188949326 Gdh FBtr0089497|FBtr0335205|FBtr0089498|FBtr0089496 23935956|23935956|23935956|23935956 23936373|23936373|23936373|23936373 3R - 23936267 23936449 stop_codon Gdh FlyBase G53936.1 CCTCAGAACCGCTGCCTACGTCAACTCCATTGAGAAGATCTTCACCACATACCGCGATGCCGGCCTGGCCTTCTAAGCCCGCTGAGTGTGCTGATTAGCCCCCAGACTCTTAACTAGTTAATTAAGCAATCGAACTCAAGAGCATAACTATTGCTATTGCTCCATGCACCGCCGTCTTAGATG 63 23936339 0.956534762 19 63 321 1 1.86332286 0.123287671 0.126984127 0.246575342 63 0 0 73 3R:23936267-23936449 6 Gdh FBtr0089498|FBtr0089496|FBtr0089497|FBtr0335205 23935956|23935956|23935956|23935956 23936373|23936373|23936373|23936373 AGTTAA 6mer3-8 dme-miR-999-3p 3R - 23936310 23936410 stop_codon Gdh FlyBase G40751.1 CTTCACCACATACCGCGATGCCGGCCTGGCCTTCTAAGCCCGCTGAGTGTGCTGATTAGCCCCCAGACTCTTAACTAGTTAATTAAGCAATCGAACTCAAG 29 23936356 0.969188146 12 26 144 0.960784314 1.69019608 0.117647059 0.482758621 0.705882353 29 2 0 49 3R:23936310-23936410 6 15.5 1997 FBgn0001098 137.9033333 7.62 11.54666667 0.112397573 2.034120735 1.342378753 5 22 13.5 0.25 dme-miR-79-3p 7mer-A1 AGCTTTA 3R 23961445 23961451 + 3R_23961445_23961451_+ 0.709738242 0.501158965 0.605448603 0.147487767 AP-1sigma FBtr0305039 23960941 23961504 3R + 23961369 23961464 3'utr AP-1sigma FlyBase G45097.1 AATCAATCACCAAATGGGCAATAACTAATTTAGTGGGGAAATATATGCAATACTATTCTTACAATAGAAACATGTAAGCTTTAATGTTGATTAAAT 23 23961443 0.986945063 6 22 158 0.962962963 1.414973348 0.259259259 0.173913043 0.296296296 23 1 0 26 3R:23961369-23961464 7 AP-1sigma FBtr0305039 23960941 23961504 AGCTTTA 7mer-A1 dme-miR-79-3p 3R + 23961430 23961464 3'utr AP-1sigma FlyBase G34062.2 CAATAGAAACATGTAAGCTTTAATGTTGATTAAAT 20 23961443 0.792994006 5 19 137 0.933333333 1.447158031 0.433333333 0.5 0.666666667 20 2 0 28 3R:23961430-23961464 7 18 1998 FBgn0039132 832.4666667 93.19333333 142.7733333 0.021622487 0.193146863 0.126073963 2 2 2 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 23985459 23985464 - 3R_23985459_23985464_- 0.596189979 0.520735093 0.558462536 0.053354671 CG13603 FBtr0084510|FBtr0084510|FBtr0084510 23985211|23985211|23985211 23985472|23985472|23985472 3R - 23985404 23985481 stop_codon CG13603 FlyBase G53977.1 AACAAATAGTTGACGTTTGTGATCAATCAGCAGCAGTTTGTAATTCTCTACGTATTTCTCATCATGTGCGTTATAATC 62 23985465 0.984361879 11 57 454 0.9 1.857332496 0.1375 0.225806452 0.4 62 8 0 72 3R:23985404-23985481 6 CG13603 FBtr0084510|FBtr0084510|FBtr0084510 23985211|23985211|23985211 23985472|23985472|23985472 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 23985354 23985483 stop_codon CG13603 FlyBase G40780.1 AGAACAAATAGTTGACGTTTGTGATCAATCAGCAGCAGTTTGTAATTCTCTACGTATTTCTCATCATGTGCGTTATAATCATTGTATGTCATTTCGTCCTCGTCCTTATCATTGAGGCAGACAACCGGCA 44 23985465 0.98365467 15 42 329 0.941176471 1.204119983 0.044117647 0.477272727 0.661764706 44 1 3 64 3R:23985354-23985483 6 41.5 1999 FBgn0039135 277 32.77 49.89333333 0.149819495 1.266402197 0.831774452 1 1 1 0.25 dme-miR-14-3p 7mer-A1 AGACTGA 3R 23989430 23989436 - 3R_23989430_23989436_- 0.783463778 0.78380034 0.783632059 0.000237941 CG13604 FBtr0113275|FBtr0113276|FBtr0113277|FBtr0084509 23988804|23988804|23988804|23988804 23989471|23989471|23989471|23989471 3R - 23989408 23989452 3'utr CG13604 FlyBase G53982.1 TTCTCTGCAAGCATTGAGACTGAGACTCAACTCGATTGGGACGGA 26 23989438 0.81861698 2 25 128 0.965517241 1.447158031 0.172413793 0.076923077 0.172413793 26 1 0 28 3R:23989408-23989452 7 CG13604 FBtr0084509|FBtr0113277|FBtr0113276|FBtr0113275 23988804|23988804|23988804|23988804 23989471|23989471|23989471|23989471 AGACTGA 7mer-A1 dme-miR-14-3p 3R - 23989392 23989450 3'utr CG13604 FlyBase G40782.1 CTCTGCAAGCATTGAGACTGAGACTCAACTCGATTGGGACGGACCTGGAGGTGAATCAC 11 23989438 0.959921769 2 11 54 1 1.278753601 0.105263158 0.545454545 0.736842105 11 0 0 19 3R:23989392-23989450 7 17.5 2000 FBgn0039137 117.6666667 5.27 8.02 0.148725212 3.320683112 2.182044888 2 2 2 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3R 23995213 23995219 + 3R_23995213_23995219_+ 0.521221569 0.52119961 0.52121059 1.56E-05 Rab7 FBtr0308612|FBtr0084503|FBtr0308611 23994749|23994749|23994749 23995252|23995452|23995252 3R + 23995150 23995241 3'utr Rab7 FlyBase G45117.1 TGCAACAGAACAGCAACATTGAGAATACAACATCAGAGTATCTTCTAAACAAACAAAAAATCTTGTGATTGTAAATTTAATAAAAGAATAAC 337 23995212 0.988788597 12 310 2912 0.923273657 1.235287907 0.046035806 0.139465875 0.25831202 337 10 20 361 3R:23995150-23995241 7 Rab7 FBtr0308612|FBtr0084503|FBtr0308611 23994749|23994749|23994749 23995252|23995452|23995252 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 23995178 23995245 3'utr Rab7 FlyBase G34078.1 AACATCAGAGTATCTTCTAAACAAACAAAAAATCTTGTGATTGTAAATTTAATAAAAGAATAACTTTT 241 23995219 0.637495373 10 223 2106 0.928571429 1.348026558 0.041666667 0.290456432 0.491071429 241 11 13 312 3R:23995178-23995245 7 281 2001 FBgn0015795 908.47 85 130.1166667 0.30931126 3.305882353 2.159600359 1 -6 -2.5 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3R 23997874 23997880 - 3R_23997874_23997880_- 0.3856046 0.305454463 0.345529531 0.056674679 KrT95D FBtr0084507|FBtr0084508 23997536|23997536 23998637|23998637 3R - 23997866 23997920 3'utr KrT95D FlyBase G53984.1 TCTACCATATATACAAAACCATGTGTACTACTCTTATTGTTGTGATTTTTGAAAT 87 23997897 0.783029589 11 85 756 0.98245614 2.049218023 0.01754386 0.229885057 0.412280702 87 2 0 112 3R:23997866-23997920 7 KrT95D FBtr0084507|FBtr0084508 23997536|23997536 23998637|23998637 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 23997869 23997915 3'utr KrT95D FlyBase G40783.1 CATATATACAAAACCATGTGTACTACTCTTATTGTTGTGATTTTTGA 75 23997897 0.815281468 9 74 623 0.991935484 2.089905111 0 0.466666667 0.677419355 75 1 0 123 3R:23997869-23997915 7 29.5 2002 FBgn0020647 1157.06 25.70333333 39.3 0.025495653 1.147711062 0.750636132 17 17 17 0.25 dme-bantam-3p 8mer-A1 TGATCTCA 3R 23998101 23998108 - 3R_23998101_23998108_- 0.585527251 0.603673758 0.594600504 0.012831513 KrT95D FBtr0084507|FBtr0084508 23997536|23997536 23998637|23998637 3R - 23998055 23998135 3'utr KrT95D FlyBase G53986.1 CCAAGCAATCGGGAGCATTAGGCCCCATGATCTCAAAATCGCCGCTCCCGTTTGGCCAACTATCAAATGAACCTAAAAGTA 92 23998108 0.952704995 10 89 399 0.972477064 1.72427587 0.018348624 0.173913043 0.302752294 92 2 1 106 3R:23998055-23998135 8 KrT95D FBtr0084507|FBtr0084508 23997536|23997536 23998637|23998637 TGATCTCA 8mer-A1 dme-bantam-3p 3R - 23998080 23998133 3'utr KrT95D FlyBase G40785.1 AAGCAATCGGGAGCATTAGGCCCCATGATCTCAAAATCGCCGCTCCCGTTTGGC 63 23998108 0.838644418 5 59 271 0.93814433 1.959041392 0.051546392 0.365079365 0.587628866 63 6 0 91 3R:23998080-23998133 8 73 2003 FBgn0020647 1157.06 25.70333333 39.3 0.063090937 2.84009856 1.857506361 0 0 0 0.25 dme-miR-184-5p 7mer-m8 TGATAAG 3R 24034590 24034596 - 3R_24034590_24034596_- 0.614009671 0.658849298 0.636429485 0.031706385 Miro FBtr0084596|FBtr0084595|FBtr0303849|FBtr0321262 24034360|24034360|24034360|24034360 24034893|24034893|24034893|24034893 3R - 24034590 24034657 3'utr Miro FlyBase G54009.1 GAGCACATTGTGTACGCTGCATTTCTAATCGTATATTAACTTACATAAACCATGTTCTCTCTGATAAG 24 24034605 0.75765264 9 21 172 0.90625 1.462397998 0.125 0.291666667 0.46875 24 3 0 29 3R:24034590-24034657 6 Miro FBtr0084596|FBtr0084595|FBtr0303849|FBtr0321262 24034360|24034360|24034360|24034360 24034893|24034893|24034893|24034893 TGATAAG 7mer-m8 dme-miR-184-5p 3R - 24034556 24034687 3'utr Miro FlyBase G40799.1 GCAGGAATTGGGCTGGAGCAGTGGCCAGTCGAGCACATTGTGTACGCTGCATTTCTAATCGTATATTAACTTACATAAACCATGTTCTCTCTGATAAGTCAAATAAGCTATTGTTACCAGCATATTCGAGTA 14 24034598 0.987621698 9 14 114 1 1.361727836 0.043478261 0.357142857 0.608695652 14 0 0 23 3R:24034556-24034687 7 11.5 2004 FBgn0039140 543 24.22 36.88333333 0.021178637 0.474814203 0.311793945 9 2 5.5 0.25 dme-miR-276a-3p 7mer-m8 AGTTCCT 3R 24042327 24042333 + 3R_24042327_24042333_+ 0.631058479 0.518750628 0.574904553 0.079413678 spas FBtr0084533|FBtr0321260|FBtr0346099 24041623|24041623|24041623 24042654|24042386|24042982 3R + 24042274 24042339 3'utr spas FlyBase G45134.1 GAATCGTATTTAAGTTTTAATAGTTATCACTGTCCGTATGGTTAGTCTAGTTTAGTTCCTTTGTTT 7 24042297 0.995170563 7 7 96 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3R:24042274-24042339 7 spas FBtr0084533|FBtr0321260|FBtr0346099 24041623|24041623|24041623 24042654|24042386|24042982 AGTTCCT 7mer-m8 dme-miR-276a-3p 3R + 24042285 24042330 3'utr spas FlyBase G34091.1 AAGTTTTAATAGTTATCACTGTCCGTATGGTTAGTCTAGTTTAGTT 14 24042310 0.6483564 6 9 129 0.714285714 0.875061263 0.19047619 0.428571429 0.619047619 14 5 1 15 3R:24042285-24042330 4 4.5 2005 FBgn0039141 308.9966667 10.26 15.68 0.014563264 0.438596491 0.286989796 30 17 23.5 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 24042416 24042421 + 3R_24042416_24042421_+ 0.820052631 0.91005219 0.86505241 0.063639327 spas FBtr0084533|FBtr0346099 24041623|24041623 24042654|24042982 3R + 24042365 24042445 3'utr spas FlyBase G45135.1 TACAATCGTCTCCGATTCACCTATATTATTAGTAACACACCCAAAAATGTTGTACCTAGCAGGTGCGTATGGATCTGGTGT 54 24042415 0.982767264 7 52 397 0.967213115 1.770852012 0.508196721 0.111111111 0.213114754 54 2 0 59 3R:24042365-24042445 6 spas FBtr0084533|FBtr0346099 24041623|24041623 24042654|24042982 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 24042394 24042442 3'utr spas FlyBase G34092.1 TAGTAACACACCCAAAAATGTTGTACCTAGCAGGTGCGTATGGATCTGG 41 24042415 0.711728743 6 33 257 0.793650794 1.397940009 0.507936508 0.341463415 0.571428571 41 12 1 50 3R:24042394-24042442 6 44 2006 FBgn0039141 308.9966667 10.26 15.68 0.142396358 4.288499025 2.806122449 1 1 1 0.25 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3R 24042549 24042554 + 3R_24042549_24042554_+ 0.644678494 0.735040438 0.689859466 0.063895512 spas FBtr0084533|FBtr0346099 24041623|24041623 24042654|24042982 3R + 24042505 24042570 3'utr spas FlyBase G45137.1 TTGAACCAGCTTCAACGCAGCTCGCCCACCCGGAATTTGAGTTCTTTGACTAGTTACTAAACACAG 11 24042541 0.973387977 6 10 62 0.923076923 1.079181246 0.461538462 0.181818182 0.307692308 11 1 0 12 3R:24042505-24042570 6 spas FBtr0084533|FBtr0346099 24041623|24041623 24042654|24042982 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3R + 24042517 24042554 3'utr spas FlyBase G34093.1 CAACGCAGCTCGCCCACCCGGAATTTGAGTTCTTTGAC 5 24042542 0.977658869 4 4 28 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:24042517-24042554 6 4 2007 FBgn0039141 308.9966667 10.26 15.68 0.012945123 0.389863548 0.255102041 8 7 7.5 0.25 dme-miR-263a-5p 7mer-m1 TGCCATT 3R 24053535 24053541 + 3R_24053535_24053541_+ 0.736972801 0.747357058 0.742164929 0.007342809 CG5991 FBtr0084538|FBtr0084536|FBtr0084537 24053389|24053389|24053389 24053592|24053592|24053592 3R + 24053391 24053558 3'utr CG5991 FlyBase G45154.1 AAATGGGAGCCACAATTATGTACCGAATCAGTGCAAAGTCCTGTCCCCCAACTGCTCAGATCACTTGTTGTATTAGCATTAGACGCTCGTGTCCTAGGCAAATGTATTTTGTGAACATCCTGCGAAGCTAACTCTGTGTATTGTTGCCATTTCAGTAGTTTTAAGCTA 354 24053531 0.965449348 30 335 2437 0.940047962 1.894316063 0.230215827 0.149717514 0.278177458 354 21 4 392 3R:24053391-24053558 7 CG5991 FBtr0084536|FBtr0084537|FBtr0084538 24053389|24053389|24053389 24053592|24053592|24053592 TGCCATT 7mer-m1 dme-miR-263a-5p 3R + 24053465 24053569 3'utr CG5991 FlyBase G34106.1 AGCATTAGACGCTCGTGTCCTAGGCAAATGTATTTTGTGAACATCCTGCGAAGCTAACTCTGTGTATTGTTGCCATTTCAGTAGTTTTAAGCTATATTTTATACA 174 24053532 0.669943802 16 169 1460 0.971530249 2.436162647 0.434163701 0.408045977 0.633451957 174 8 0 273 3R:24053465-24053569 7 131 2008 FBgn0026576 379.7933333 22.07666667 33.86 0.344924433 5.933866828 3.868871825 4 3 3.5 0.25 dme-bantam-3p 8mer-A1 TGATCTCA 3R 24055167 24055174 - 3R_24055167_24055174_- 0.621090095 0.619808782 0.620449438 0.000906016 Hsp68 FBtr0084589 24055078 24055196 3R - 24055146 24055243 stop_codon Hsp68 FlyBase G54050.1 AGCAAGCTGGCGGTTATAAGGGTCCCACCGTCGAGGAGGTGGACTAATTCAAACGAAGTCCCCCTATATTGATCTCATAACCAAAAATACTCAAATAT 1368 24055175 0.876142772 14 1328 9596 0.971669681 1.952092532 0.177817963 0.159356725 0.306811332 1368 30 17 1612 3R:24055146-24055243 8 Hsp68 FBtr0084589 24055078 24055196 TGATCTCA 8mer-A1 dme-bantam-3p 3R - 24055105 24055193 3'utr Hsp68 FlyBase G40829.1 AAACGAAGTCCCCCTATATTGATCTCATAACCAAAAATACTCAAATATCTAAAAATATAGTTCCAATATGCTATTAAATAGTATTAATA 663 24055175 0.678258466 13 636 4675 0.962151394 1.984977126 0.156374502 0.34841629 0.569721116 663 29 9 966 3R:24055105-24055193 8 1005 2009 FBgn0001230 388.3333333 20.75333333 31.29666667 2.587982833 48.42595567 32.11204601 1 1 1 0.25 dme-miR-11-3p 7mer-m1 TGTGATG 3R 24067400 24067406 - 3R_24067400_24067406_- 0.535593314 0.535589465 0.535591389 2.69E-06 4EHP FBtr0300475|FBtr0303159 24067364|24064475 24101797|24068001 3R - 24067385 24067426 3'utr 4EHP FlyBase G54063.1 TTAATTAGTAATTATTATAATGTGATGTTATATATATAAATC 35 24067410 0.651195498 9 33 393 0.973684211 1.568201724 0.052631579 0.085714286 0.157894737 35 1 0 37 3R:24067385-24067426 7 4EHP FBtr0300475|FBtr0303159 24067364|24064475 24101797|24068001 TGTGATG 7mer-m1 dme-miR-11-3p 3R - 24067384 24067426 3'utr 4EHP FlyBase G40836.1 TTAATTAGTAATTATTATAATGTGATGTTATATATATAAATCA 34 24067399 0.652942345 7 31 396 0.913043478 1.62324929 0 0.294117647 0.47826087 34 4 0 42 3R:24067384-24067426 7 34 2010 FBgn0053100 1050.1 50.24 77.18 0.032377869 0.676751592 0.440528634 4 -7 -1.5 0.25 dme-miR-2535b-3p 8mer-A1 CCGTGAGA 3R 24167711 24167718 - 3R_24167711_24167718_- 0.530044799 0.616728677 0.573386738 0.061294774 CG5510 FBtr0084576 24167673 24167937 3R - 24167692 24167739 3'utr CG5510 FlyBase G54112.1 TGAACTATAGGAAAATTGAGACCGTGAGAATATTATTGCGTAGACAAG 18 24167723 0.760100224 6 17 89 0.958333333 1.361727836 0.125 0.333333333 0.5 18 1 0 23 3R:24167692-24167739 8 CG5510 FBtr0084576 24167673 24167937 CCGTGAGA 8mer-A1 dme-miR-2535b-3p 3R - 24167695 24167734 3'utr CG5510 FlyBase G40868.1 TATAGGAAAATTGAGACCGTGAGAATATTATTGCGTAGAC 6 24167715 0.937340613 3 5 32 0.857142857 0.77815125 0.142857143 0.166666667 0.285714286 6 1 0 6 3R:24167695-24167734 8 11.5 2011 FBgn0039160 449.3066667 40.31666667 61.58 0.025594991 0.285241835 0.186748944 5 -3 1 0.25 dme-miR-317-5p 8mer-A1 GTATCCCA 3R 24167839 24167846 - 3R_24167839_24167846_- 0.65996778 0.646916992 0.653442386 0.009228309 CG5510 FBtr0084576 24167673 24167937 3R - 24167823 24167948 stop_codon CG5510 FlyBase G54113.1 GTTTCTACTGAGCTCTCTAGCTAGTTCATCACAGTAGCATCATGTTAGGAGTTACCCGGACCTCAGTTGATCGCAACTTTTATTTATATTTATACCGCGACTGTATCCCATTTCTTATCACCCTTT 60 24167845 0.936914751 17 56 395 0.940298507 1.498310554 0.119402985 0.116666667 0.208955224 60 3 1 63 3R:24167823-24167948 8 CG5510 FBtr0084576 24167673 24167937 GTATCCCA 8mer-A1 dme-miR-317-5p 3R - 24167808 24167867 3'utr CG5510 FlyBase G40869.1 ATTTATATTTATACCGCGACTGTATCCCATTTCTTATCACCCTTTTTAGTTTCCTTAATT 15 24167845 0.982028415 6 15 118 1 1.380211242 0.041666667 0.4 0.625 15 0 0 24 3R:24167808-24167867 8 20 2012 FBgn0039160 449.3066667 40.31666667 61.58 0.044513027 0.496072757 0.324780773 -1 -1 -1 0.25 dme-miR-970-3p 8mer-A1 TCTTATGA 3R 24248707 24248714 + 3R_24248707_24248714_+ 0.630788017 0.630760885 0.630774451 1.92E-05 mask FBtr0345261|FBtr0084562|FBtr0334942|FBtr0305043|FBtr0334943|FBtr0084563 24248013|24248013|24248013|24248013|24248013|24248013 24250248|24250248|24250248|24250248|24250248|24248853 3R + 24248650 24248724 3'utr mask FlyBase G45302.1 ACACAAACCCACACACCCGCATATACACAAATACATTTACGTTAGGATAAAAGTCAGTCTTATGAATGAAACATT 21 24248707 0.972439039 9 20 120 0.916666667 1.342422681 0.125 0.142857143 0.25 21 2 0 22 3R:24248650-24248724 8 mask FBtr0334942|FBtr0305043|FBtr0334943|FBtr0084563|FBtr0345261|FBtr0084562 24248013|24248013|24248013|24248013|24248013|24248013 24250248|24250248|24250248|24248853|24250248|24250248 TCTTATGA 8mer-A1 dme-miR-970-3p 3R + 24248660 24248754 3'utr mask FlyBase G34197.1 ACACACCCGCATATACACAAATACATTTACGTTAGGATAAAAGTCAGTCTTATGAATGAAACATTAAATTGAAATGTTTAGCGCCAGCTAAAGTT 17 24248714 0.981160097 8 15 110 0.913043478 1.322219295 0.043478261 0.235294118 0.434782609 17 2 0 21 3R:24248660-24248754 8 11 2013 FBgn0043884 5250.546667 44.06333333 67.82333333 0.00209502 0.249640669 0.162186072 0 -7 -3.5 0.25 dme-miR-7-5p 6mer3-8 GTCTTC 3R 24291813 24291818 + 3R_24291813_24291818_+ 0.987014999 0.986087617 0.986551308 0.000655771 CG6364 FBtr0084602|FBtr0309095|FBtr0309097|FBtr0309096 24291623|24291623|24291623|24291623 24292251|24292599|24293111|24293371 3R + 24291797 24291894 3'utr CG6364 FlyBase G45335.1 CATCGCTTCTCATTTGGTCTTCTCATCGTAACCGATTAACGTAGTCCTAAGATTGAAAAGTATCTTTAGTATCTACTCTTGCATATGTTCAACAATAC 16 24291811 0.790952198 11 16 141 1 1.230448921 0.176470588 0.0625 0.117647059 16 0 0 17 3R:24291797-24291894 6 CG6364 FBtr0309097|FBtr0309096|FBtr0084602|FBtr0309095 24291623|24291623|24291623|24291623 24293111|24293371|24292251|24292599 GTCTTC 6mer3-8 dme-miR-7-5p 3R + 24291799 24291845 3'utr CG6364 FlyBase G34222.1 TCGCTTCTCATTTGGTCTTCTCATCGTAACCGATTAACGTAGTCCTA 8 24291811 0.704601409 5 8 64 1 1.041392685 0.181818182 0.375 0.545454545 8 0 0 11 3R:24291799-24291845 6 7 2014 FBgn0263398 498.7566667 32.38666667 49.51666667 0.0140349 0.216138329 0.141366543 2 2 2 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3R 24328578 24328584 - 3R_24328578_24328584_- 0.41488808 0.518295073 0.466591576 0.073119791 CG5728 FBtr0084632 24328453 24328688 3R - 24328514 24328593 3'utr CG5728 FlyBase G54186.1 TAAATGAAGTGTGATTCCGAGTGCTACCTTTAAATATATATGTATGATAGTACCTATATATTATAGAAATACATATAAAA 32 24328572 0.986496262 9 28 247 0.930232558 1.301029996 0.279069767 0.28125 0.465116279 32 2 1 40 3R:24328514-24328593 7 CG5728 FBtr0084632 24328453 24328688 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 24328536 24328641 3'utr CG5728 FlyBase G40919.1 AAGAGTTACATACAGTGTTTTTCATGATACTTTATTCTAAAACTATTTTAAATGAAGTGTGATTCCGAGTGCTACCTTTAAATATATATGTATGATAGTACCTATA 22 24328579 0.911690021 15 21 186 0.96969697 1.505149978 0.303030303 0.363636364 0.575757576 22 1 0 32 3R:24328536-24328641 7 19 2015 FBgn0039182 780.49 20.48333333 31.61333333 0.024343682 0.927583401 0.601012231 -12 -5 -8.5 0.25 dme-miR-14-3p 8mer-A1 AAGACTGA 3R 24344645 24344652 - 3R_24344645_24344652_- 0.643219378 0.637767299 0.640493338 0.003855217 CG5746 FBtr0334603 24343893 24346710 3R - 24344606 24344746 3'utr CG5746 FlyBase G54200.1 ATGTATACAATGATTTTATTTGTTATTATTAAGCCGAACCTAAACTACAGTCTTAAAAAGTATAAACAAGATATGCAAATGAAAATTTATTAAAAAGACTGATACTTCACGAGATACAATCTCCATAGATCCAAAGAAACT 58 24344658 0.980591959 18 53 375 0.897058824 1.30820858 0.044117647 0.155172414 0.279411765 58 5 2 61 3R:24344606-24344746 8 CG5746 FBtr0334603 24343893 24346710 AAGACTGA 8mer-A1 dme-miR-14-3p 3R - 24344598 24344745 3'utr CG5746 FlyBase G40927.1 TGTATACAATGATTTTATTTGTTATTATTAAGCCGAACCTAAACTACAGTCTTAAAAAGTATAAACAAGATATGCAAATGAAAATTTATTAAAAAGACTGATACTTCACGAGATACAATCTCCATAGATCCAAAGAAACTAAATATAA 43 24344658 0.988572706 18 36 313 0.84375 1.033423755 0.109375 0.279069767 0.515625 43 6 4 54 3R:24344598-24344745 8 34.5 2016 FBgn0039186 880.5666667 39.34 60.32 0.039179316 0.876970005 0.571949602 6 6 6 0.25 dme-miR-305-5p 8mer-A1 AGTACAAA 3R 24345262 24345269 - 3R_24345262_24345269_- 0.528730992 0.596530422 0.562630707 0.047941416 CG5746 FBtr0334603 24343893 24346710 3R - 24345256 24345328 3'utr CG5746 FlyBase G54203.1 CACGTACCATAACAATTCAATTAGATAAATATCTAAAATTACAAACTGAAAGCACTGAAAGTACAAAATGAAA 31 24345260 0.952942615 6 23 106 0.736842105 0.970036777 0.105263158 0.193548387 0.342105263 31 8 2 28 3R:24345256-24345328 8 CG5746 FBtr0334603 24343893 24346710 AGTACAAA 8mer-A1 dme-miR-305-5p 3R - 24345249 24345308 3'utr CG5746 FlyBase G40930.1 TTAGATAAATATCTAAAATTACAAACTGAAAGCACTGAAAGTACAAAATGAAAATATAAA 27 24345267 0.698878618 7 21 91 0.813953488 0.84509804 0.023255814 0.444444444 0.651162791 27 4 4 35 3R:24345249-24345308 8 24 2017 FBgn0039186 880.5666667 39.34 60.32 0.027255177 0.61006609 0.397877984 -9 -2 -5.5 0.25 dme-miR-14-3p 8mer-A1 AAGACTGA 3R 24345630 24345637 - 3R_24345630_24345637_- 0.629060115 0.610566487 0.619813301 0.01307695 CG5746 FBtr0334603 24343893 24346710 3R - 24345545 24345674 3'utr CG5746 FlyBase G54205.1 AGACGAATAATGAGTGAAAAATGTGAAAAAAAAACGTAAGACTGAATATATTCACGAACCGAAGCTGCACTGCAAGCATACAAGTCAAGAAAAATGAGAGACAAATGAATGAAATAACAGAGTTTTAAGT 42 24345638 0.930267726 12 41 151 0.978723404 1.662757832 0.170212766 0.119047619 0.212765957 42 1 0 46 3R:24345545-24345674 8 CG5746 FBtr0334603 24343893 24346710 AAGACTGA 8mer-A1 dme-miR-14-3p 3R - 24345597 24345648 3'utr CG5746 FlyBase G40932.1 AAAAAAAACGTAAGACTGAATATATTCACGAACCGAAGCTGCACTGCAAGCA 21 24345638 0.919651211 4 18 63 0.870967742 1.431363764 0 0.380952381 0.580645161 21 4 0 27 3R:24345597-24345648 8 20.5 2018 FBgn0039186 880.5666667 39.34 60.32 0.023280463 0.521098119 0.339854111 1 1 1 0.25 dme-bantam-3p 6mer3-8 TGATCT 3R 24346179 24346184 - 3R_24346179_24346184_- 0.962112904 0.998883613 0.980498258 0.026000811 CG5746 FBtr0334603|FBtr0334602|FBtr0273282|FBtr0084631|FBtr0084630|FBtr0334601|FBtr0273283 24343893|24345790|24345790|24345790|24345790|24345790|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 3R - 24346008 24346201 3'utr CG5746 FlyBase G54207.1 AATGAGAGTACGTAACATGATCTTTTGAATGAACTAAATTTAAACATTTTGTGAATCATGTAAAATTGTATACAAATGAATGCAATGTATATTTTAGTTTTTAAGCTGAAAACCGCAATCCACTCTCGACACAATTATTTTCTATCCCACATGCATCTGAAAGCGTTTATGATTTTGCAAGATTGTGTTTTTTT 61 24346184 0.980956857 17 60 438 0.987179487 1.886490725 0.166666667 0.229508197 0.397435897 61 1 0 77 3R:24346008-24346201 6 CG5746 FBtr0273283|FBtr0084630|FBtr0334601|FBtr0273282|FBtr0084631|FBtr0334603|FBtr0334602 24345790|24345790|24345790|24345790|24345790|24343893|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 TGATCT 6mer3-8 dme-bantam-3p 3R - 24346140 24346207 3'utr CG5746 FlyBase G40934.1 CGGAAAAATGAGAGTACGTAACATGATCTTTTGAATGAACTAAATTTAAACATTTTGTGAATCATGTA 40 24346183 0.981501476 5 39 287 0.983050847 1.763427994 0.271186441 0.4 0.593220339 40 1 0 58 3R:24346140-24346207 6 36.5 2019 FBgn0039186 880.5666667 39.34 60.32 0.041450581 0.927808846 0.605106101 0 -1 -0.5 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 3R 24346235 24346241 - 3R_24346235_24346241_- 0.63872493 0.656879571 0.64780225 0.012837311 CG5746 FBtr0334603|FBtr0334602|FBtr0273282|FBtr0084631|FBtr0084630|FBtr0334601|FBtr0273283 24343893|24345790|24345790|24345790|24345790|24345790|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 3R - 24346228 24346333 3'utr CG5746 FlyBase G54208.1 TAGACAAACGGAGCTAGACTGCACTGAGCTCCAGCCTAAGAAAATTAAATGTGCTCCTCCTTAGTTCCATTTACAATTACAAGTCAACTGTGACCAAAGTATGCTA 25 24346264 0.972417503 15 23 144 0.935483871 1.462397998 0.193548387 0.2 0.35483871 25 2 0 29 3R:24346228-24346333 7 CG5746 FBtr0273283|FBtr0084630|FBtr0334601|FBtr0273282|FBtr0084631|FBtr0334603|FBtr0334602 24345790|24345790|24345790|24345790|24345790|24343893|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 24346226 24346289 3'utr CG5746 FlyBase G40935.1 TTAAATGTGCTCCTCCTTAGTTCCATTTACAATTACAAGTCAACTGTGACCAAAGTATGCTACA 15 24346245 0.725993815 10 15 102 1 1.342422681 0.136363636 0.4 0.590909091 15 0 0 22 3R:24346226-24346289 7 7.5 2020 FBgn0039186 880.5666667 39.34 60.32 0.008517243 0.190645653 0.12433687 23 4 13.5 0.25 dme-miR-277-3p 7mer-A1 GCATTTA 3R 24346476 24346482 - 3R_24346476_24346482_- 0.81402906 0.728351903 0.771190482 0.060582929 CG5746 FBtr0334603|FBtr0334602|FBtr0273282|FBtr0084631|FBtr0084630|FBtr0334601|FBtr0273283 24343893|24345790|24345790|24345790|24345790|24345790|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 3R - 24346440 24346576 3'utr CG5746 FlyBase G54210.1 AATTAACTTGCTATACATAACACGCAAACACACACATACGCGGTCACTCAAAGCATACAATTTTAGTTTTAAGTATAAAGTTCTCTTTTTCTTAGCATTTAAGCAAACTAGTGTTTCGACGTCTTTCTACATAAACC 22 24346490 0.991484007 15 20 204 0.931034483 1.431363764 0.068965517 0.272727273 0.448275862 22 2 0 27 3R:24346440-24346576 7 CG5746 FBtr0273283|FBtr0084630|FBtr0334601|FBtr0273282|FBtr0084631|FBtr0334603|FBtr0334602 24345790|24345790|24345790|24345790|24345790|24343893|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 GCATTTA 7mer-A1 dme-miR-277-3p 3R - 24346448 24346506 3'utr CG5746 FlyBase G40938.1 AAGTATAAAGTTCTCTTTTTCTTAGCATTTAAGCAAACTAGTGTTTCGACGTCTTTCTA 6 24346491 0.994884186 5 5 63 0.857142857 0.77815125 0.285714286 0.166666667 0.285714286 6 1 0 6 3R:24346448-24346506 7 4 2021 FBgn0039186 880.5666667 39.34 60.32 0.004542529 0.101677682 0.066312997 8 9 8.5 0.25 dme-miR-7-5p 6mer2-7 TCTTCC 3R 24355848 24355853 + 3R_24355848_24355853_+ 0.999640609 0.999852736 0.999746673 0.000149977 CG6454 FBtr0273323|FBtr0273324|FBtr0330373 24355777|24355777|24355801 24356241|24356241|24356241 3R + 24355821 24355869 3'utr CG6454 FlyBase G45385.1 CGTCCCAAAAGCGTATACTCTCTATTTTCTTCCGCTTAGCTAGAACTAT 7 24355847 0.714462663 5 6 64 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3R:24355821-24355869 6 CG6454 FBtr0330373|FBtr0273323|FBtr0273324 24355801|24355777|24355777 24356241|24356241|24356241 TCTTCC 6mer2-7 dme-miR-7-5p 3R + 24355809 24355893 3'utr CG6454 FlyBase G34254.1 TTTTACGCGAATCGTCCCAAAAGCGTATACTCTCTATTTTCTTCCGCTTAGCTAGAACTATCAGCTCTGCCCAGCAACTGGAGTT 12 24355848 0.950465007 9 11 82 0.933333333 1.146128036 0.066666667 0.25 0.4 12 1 0 14 3R:24355809-24355893 6 4.5 2022 FBgn0039187 605.7933333 16.75333333 25.68 0.007428276 0.268603263 0.175233645 1 0 0.5 0.25 dme-miR-252-5p 6mer3-8 GTACTT 3R 24536417 24536422 - 3R_24536417_24536422_- 0.982567529 0.901093486 0.941830508 0.057610818 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 3R - 24536316 24536446 3'utr CG5789 FlyBase G54228.1 CTATATTCATACAACCGAAATATTGTACTTGAAACTCTAGATAGAAATTTAATAAATAATCGTCGGGTTTATTAAAATATAAATAAGTTTCACACAAATTGGTAATAAAATTGTACATTTAACTTATTGAG 15 24536423 0.978457433 10 14 105 1 1.255272505 0.111111111 0.2 0.333333333 15 0 0 18 3R:24536316-24536446 6 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 GTACTT 6mer3-8 dme-miR-252-5p 3R - 24536315 24536438 3'utr CG5789 FlyBase G40949.1 ATACAACCGAAATATTGTACTTGAAACTCTAGATAGAAATTTAATAAATAATCGTCGGGTTTATTAAAATATAAATAAGTTTCACACAAATTGGTAATAAAATTGTACATTTAACTTATTGAGT 19 24536423 0.981217905 10 19 141 1 1.380211242 0.041666667 0.210526316 0.375 19 0 0 24 3R:24536315-24536438 6 8 2023 FBgn0039207 633.5166667 14.68333333 22.4 0.012627923 0.544835414 0.357142857 1 1 1 0.25 dme-miR-34-5p 6mer2-7 ACTGCC 3R 24536690 24536695 - 3R_24536690_24536695_- 0.740749398 0.970390408 0.855569903 0.162380708 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 3R - 24536647 24536743 3'utr CG5789 FlyBase G54230.1 CATTTCCTTAGTTTAGTTAAGTTTGTTAACGAAAAGTCTAGAATGTGTACTGCCTTATACGTATTGTACTTAGATGTAATCTCCACCAGGGACTACG 76 24536689 0.64873482 15 67 595 0.88 1.643452676 0.08 0.263157895 0.44 76 11 1 88 3R:24536647-24536743 6 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 ACTGCC 6mer2-7 dme-miR-34-5p 3R - 24536640 24536720 3'utr CG5789 FlyBase G40951.1 TGTTAACGAAAAGTCTAGAATGTGTACTGCCTTATACGTATTGTACTTAGATGTAATCTCCACCAGGGACTACGTTGTAAT 67 24536689 0.985773058 10 60 502 0.908045977 1.420505837 0.16091954 0.23880597 0.413793103 67 6 2 79 3R:24536640-24536720 6 54 2024 FBgn0039207 633.5166667 14.68333333 22.4 0.085238484 3.677639047 2.410714286 -6 -6 -6 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 24536787 24536792 - 3R_24536787_24536792_- 0.990808868 0.943174118 0.966991493 0.03368289 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 3R - 24536759 24536843 3'utr CG5789 FlyBase G54231.1 CAACTCTTGGGCTCCCAATGGAAGAGGAATCTTGTCCAAAACAAAAACCGTACCAAAATGATTTTCTTGTGCACATACACATATT 32 24536785 0.864358553 10 31 204 0.974358974 1.579783597 0.025641026 0.1875 0.333333333 32 1 0 38 3R:24536759-24536843 6 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 24536765 24536891 3'utr CG5789 FlyBase G40952.1 CGGAAATCGCATTTAACCAAATCTGGTGCTTATAATGGCTCAAGGTTACAACTCTTGGGCTCCCAATGGAAGAGGAATCTTGTCCAAAACAAAAACCGTACCAAAATGATTTTCTTGTGCACATACA 38 24536784 0.985923419 14 33 271 0.875 1.146128036 0.0625 0.236842105 0.395833333 38 4 2 42 3R:24536765-24536891 6 23 2025 FBgn0039207 633.5166667 14.68333333 22.4 0.03630528 1.566401816 1.026785714 -7 -8 -7.5 0.25 dme-miR-317-3p 8mer-A1 TGTGTTCA 3R 24558703 24558710 - 3R_24558703_24558710_- 0.592500887 0.572042414 0.582271651 0.014466344 CG13624 FBtr0084672 24557366 24560507 3R - 24558676 24558733 3'utr CG13624 FlyBase G54253.1 CTGCTATTTGTTGCTTAACGTGTTGTGTTCAATTGATATCAAAAGAATTAACTTTCGA 145 24558711 0.751239715 5 143 1366 1 2.292256071 0.433673469 0.289655172 0.474489796 145 0 0 196 3R:24558676-24558733 8 CG13624 FBtr0084672 24557366 24560507 TGTGTTCA 8mer-A1 dme-miR-317-3p 3R - 24558679 24558744 3'utr CG13624 FlyBase G40969.1 AGCCTTTCTTACTGCTATTTGTTGCTTAACGTGTTGTGTTCAATTGATATCAAAAGAATTAACTTT 142 24558711 0.755416847 9 141 1367 0.976303318 2.31386722 0.450236967 0.38028169 0.582938389 142 5 0 206 3R:24558679-24558744 8 141.5 2026 FBgn0039209 1863.993333 50.61333333 77.60666667 0.075912289 2.795706006 1.823296968 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 24558828 24558834 - 3R_24558828_24558834_- 0.749150602 0.747409393 0.748279998 0.001231214 CG13624 FBtr0084672|FBtr0084672|FBtr0084672 24557366|24557366|24557366 24560507|24560507|24560507 3R - 24558772 24558887 3'utr CG13624 FlyBase G54254.1 TTCTAATTTGCATTATCAAAATGAATACTTTTGCTCTGCTTCGATGCTAATTTTGTGATATTTGTATTCAAATTTTCTTTGTTGTGTAGTTCTTTGGGGCGGGATCCTCCTATTTT 179 24558836 0.99371934 18 168 2108 0.944954128 1.614897216 0.26146789 0.184357542 0.330275229 179 8 4 206 3R:24558772-24558887 7 CG13624 FBtr0084672|FBtr0084672|FBtr0084672 24557366|24557366|24557366 24560507|24560507|24560507 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 24558812 24558861 3'utr CG13624 FlyBase G40970.1 ACTTTTGCTCTGCTTCGATGCTAATTTTGTGATATTTGTATTCAAATTTT 126 24558836 0.715429481 11 113 1500 0.914893617 1.33243846 0.271276596 0.412698413 0.606382979 126 9 7 172 3R:24558812-24558861 7 147 2027 FBgn0039209 1863.993333 50.61333333 77.60666667 0.078862943 2.904373024 1.894167168 2 2 2 0.25 dme-miR-965-3p 6mer3-8 TACGCT 3R 24560392 24560397 - 3R_24560392_24560397_- 0.811671493 0.685921213 0.748796353 0.08891889 CG13624 FBtr0084674|FBtr0084673|FBtr0084672|FBtr0345204|FBtr0084675 24559278|24559278|24557366|24559787|24559787 24560507|24560507|24560507|24560507|24560507 3R - 24560382 24560448 5'utr CG13624 FlyBase G54262.1 AAGAACCTGGGCGAATCCACCGAGGAGGTGGACCAACAAATTGCACGCATTTACGCTACCGCCTCTT 8 24560398 0.917592041 6 7 27 1 0.903089987 0.25 0 0 8 0 0 8 3R:24560382-24560448 6 CG13624 FBtr0084673|FBtr0084674|FBtr0084675|FBtr0345204|FBtr0084672 24559278|24559278|24559787|24559787|24557366 24560507|24560507|24560507|24560507|24560507 TACGCT 6mer3-8 dme-miR-965-3p 3R - 24560385 24560434 5'utr CG13624 FlyBase G40976.1 ATCCACCGAGGAGGTGGACCAACAAATTGCACGCATTTACGCTACCGCCT 6 24560398 0.913816239 4 6 21 1 1.041392685 0 0.333333333 0.636363636 6 0 0 11 3R:24560385-24560434 6 3.5 2028 FBgn0039209 1863.993333 50.61333333 77.60666667 0.001877689 0.069151739 0.045099218 1 1 1 0.25 dme-miR-33-5p 7mer-A1 AATGCAA 3R 24623388 24623394 + 3R_24623388_24623394_+ 0.744343241 0.751016882 0.747680061 0.004719019 mld FBtr0304912|FBtr0304915|FBtr0304914|FBtr0304913|FBtr0111012 24623171|24623171|24623171|24623171|24623171 24623899|24623899|24623899|24623899|24623899 3R + 24623365 24623410 3'utr mld FlyBase G45457.1 AAAAGAACCAGCAGACTGCATTGAATGCAATCCCATATTGCACTAA 18 24623385 0.914976998 3 17 56 0.956521739 1.342422681 0.47826087 0.222222222 0.391304348 18 1 0 22 3R:24623365-24623410 7 mld FBtr0111012|FBtr0304914|FBtr0304913|FBtr0304912|FBtr0304915 24623171|24623171|24623171|24623171|24623171 24623899|24623899|24623899|24623899|24623899 AATGCAA 7mer-A1 dme-miR-33-5p 3R + 24623365 24623483 3'utr mld FlyBase G34297.1 AAAAGAACCAGCAGACTGCATTGAATGCAATCCCATATTGCACTAAAAACAAAAGAACACCTAGCGACTAAGCCAAGGATACACTCCCTCAGACACAAATCTTAAGGCTACAAAATATT 39 24623385 0.999256649 9 37 109 0.967213115 1.293730757 0.163934426 0.461538462 0.655737705 39 0 2 59 3R:24623365-24623483 7 15 2029 FBgn0263490 229.3433333 3.983333333 6.11 0.065404125 3.765690377 2.454991817 3 3 3 0.25 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 3R 24636299 24636306 - 3R_24636299_24636306_- 0.608749106 0.625081658 0.616915382 0.011548892 puf FBtr0084668|FBtr0330309|FBtr0330308|FBtr0306172|FBtr0339135 24635268|24635268|24635268|24635268|24635268 24636457|24636403|24636457|24636457|24636457 3R - 24636280 24636320 3'utr puf FlyBase G54298.1 AAGCAACCCAAGGTTGGTGCTAATGGTTGGGTTTGGGTGCG 10 24636307 0.973345582 6 10 67 1 1.146128036 0.071428571 0.4 0.571428571 10 0 0 14 3R:24636280-24636320 8 puf FBtr0339135|FBtr0330308|FBtr0306172|FBtr0084668|FBtr0330309 24635268|24635268|24635268|24635268|24635268 24636457|24636457|24636457|24636457|24636403 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 3R - 24636279 24636320 3'utr puf FlyBase G41008.1 AAGCAACCCAAGGTTGGTGCTAATGGTTGGGTTTGGGTGCGT 8 24636307 0.948334022 3 7 35 1 1 0 0.25 0.4 8 0 0 10 3R:24636279-24636320 8 8.5 2030 FBgn0039214 1184.2 11.81333333 18.17333333 0.007177842 0.719525959 0.467718269 1 1 1 0.25 dme-miR-14-3p 6mer3-8 AAGACT 3R 24653288 24653293 + 3R_24653288_24653293_+ 0.991550881 0.867536873 0.929543877 0.08769114 ash2 FBtr0084659|FBtr0306171|FBtr0084660 24653201|24653201|24653201 24653376|24653376|24653376 3R + 24653261 24653303 3'utr ash2 FlyBase G45491.1 CTATACTTTGGAAAGCAGAAATTTGAAAAGACTATCATCATAC 27 24653283 0.596601202 4 26 150 0.972972973 1.556302501 0.027027027 0.296296296 0.486486486 27 1 0 36 3R:24653261-24653303 6 ash2 FBtr0084659|FBtr0306171|FBtr0084660 24653201|24653201|24653201 24653376|24653376|24653376 AAGACT 6mer3-8 dme-miR-14-3p 3R + 24653256 24653302 3'utr ash2 FlyBase G34324.1 ATGCACTATACTTTGGAAAGCAGAAATTTGAAAAGACTATCATCATA 29 24653295 0.928222065 7 26 149 0.921052632 1.544068044 0.052631579 0.275862069 0.447368421 29 3 0 35 3R:24653256-24653302 6 24.5 2031 FBgn0000139 191.3333333 12.33666667 18.87 0.12804878 1.985949743 1.298357181 5 -7 -1 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 3R 24760277 24760282 + 3R_24760277_24760282_+ 0.537377161 0.549257058 0.543317109 0.008400358 asp FBtr0084692 24760231 24760513 3R + 24760167 24760373 stop_codon asp FlyBase G45533.1 ACGTTTATCTCGTCCGTTTACGCCTTCGATACGATTTTGTGCAAGCTGCAGATCGACATGTTTTAGATTTAGGAAAATTCATCTTTAAATGTTTAATGTTAAAACCATTCTGTGTTGTGTTTTAAAATAGTCACATAAATTCTTAGACCATGCTAGTTTTTTGGAGACAATTAGAAATAGTTTAAGATAATCTAAGACCGTCTTAAC 88 24760275 0.831793272 25 81 906 0.923076923 1.982271233 0.153846154 0.159090909 0.288461538 88 8 0 96 3R:24760167-24760373 6 asp FBtr0084692 24760231 24760513 TGTGTT 6mer3-8 dme-miR-317-3p 3R + 24760248 24760354 3'utr asp FlyBase G34349.1 TCTTTAAATGTTTAATGTTAAAACCATTCTGTGTTGTGTTTTAAAATAGTCACATAAATTCTTAGACCATGCTAGTTTTTTGGAGACAATTAGAAATAGTTTAAGAT 39 24760275 0.877326542 13 37 392 0.964912281 1.740362689 0.192982456 0.333333333 0.543859649 39 2 0 55 3R:24760248-24760354 6 44 2032 FBgn0000140 1001.803333 19.02666667 29.17333333 0.043920796 2.312543798 1.508226691 2 2 2 0.25 dme-miR-1008-3p 6mer2-7 GCTGTG 3R 24769845 24769850 + 3R_24769845_24769850_+ 0.992353738 0.991631963 0.99199285 0.000510319 CG13631 FBtr0084693|FBtr0339253 24769772|24769772 24770111|24770933 3R + 24769815 24769890 3'utr CG13631 FlyBase G45538.1 CGAACGGTCGCAGGAGCGGTCGAGTGCTGTGCTGTGGGTTGTCGGCGGGGGATCTCTGGCTGATCGGAGGAAGGAT 173 24769843 0.767996026 12 168 1129 0.955 1.980003372 0.545 0.12716763 0.245 173 8 1 191 3R:24769815-24769890 6 CG13631 FBtr0339253|FBtr0084693 24769772|24769772 24770933|24770111 GCTGTG 6mer2-7 dme-miR-1008-3p 3R + 24769815 24769915 3'utr CG13631 FlyBase G34353.1 CGAACGGTCGCAGGAGCGGTCGAGTGCTGTGCTGTGGGTTGTCGGCGGGGGATCTCTGGCTGATCGGAGGAAGGATAACACGGAGATATGGATTTGGATAT 206 24769843 0.770927398 13 199 1349 0.968944099 1.892094603 0.562111801 0.412621359 0.624223602 206 7 3 312 3R:24769815-24769915 6 165.5 2033 FBgn0040600 1409.473333 109.07 167.31 0.117419745 1.517374163 0.989181758 2 2 2 0.25 dme-miR-282-5p 7mer-m8 AGAGGCT 3R 24770042 24770048 + 3R_24770042_24770048_+ 0.62836719 0.630849319 0.629608255 0.00175511 CG13631 FBtr0084693|FBtr0339253 24769772|24769772 24770111|24770933 3R + 24769968 24770108 3'utr CG13631 FlyBase G45540.1 GTTCCCAAGATTCCAATGGGTAATCCAAATAGTTCGATTCGTATGACCCGAATGGGTGATCCCCGGATCACGTTAGAGGCTTCAAAGTGTTGGCAGGGGACAGGGCAATCTGTGTAACGACATTCCTTCTCAACAATAACT 147 24770041 0.975419638 16 136 859 0.920903955 1.911157609 0.271186441 0.170068027 0.310734463 147 13 1 163 3R:24769968-24770108 7 CG13631 FBtr0339253|FBtr0084693 24769772|24769772 24770933|24770111 AGAGGCT 7mer-m8 dme-miR-282-5p 3R + 24769998 24770102 3'utr CG13631 FlyBase G34355.1 AGTTCGATTCGTATGACCCGAATGGGTGATCCCCGGATCACGTTAGAGGCTTCAAAGTGTTGGCAGGGGACAGGGCAATCTGTGTAACGACATTCCTTCTCAACA 105 24770041 0.936151021 13 93 551 0.873493976 2.161368002 0.313253012 0.419047619 0.63253012 105 21 0 145 3R:24769998-24770102 7 98.5 2034 FBgn0040600 1409.473333 109.07 167.31 0.069884259 0.903089759 0.588727512 1 1 1 0.25 dme-miR-305-3p 6mer2-7 TGTGCC 3R 24770673 24770678 + 3R_24770673_24770678_+ 0.673225581 0.952381462 0.812803522 0.19739303 CG13631 FBtr0339253 24769772 24770933 3R + 24770600 24770744 3'utr CG13631 FlyBase G45545.2 TTAATATCTATACTACTGTTACTACTCTAATAATCATATTGTATGTGCCGCACGAGGAGAGGGAACTCAAAATTGTGCCCCCAAATGGGTGGTGGATGGTGTTTGCTCAAGTGATTCGTACTAAAATGGCAGCGGGAATGCGATT 57 24770674 0.962280244 20 52 302 0.936507937 1.770852012 0.206349206 0.087719298 0.174603175 57 4 0 59 3R:24770600-24770744 6 CG13631 FBtr0339253 24769772 24770933 TGTGCC 6mer2-7 dme-miR-305-3p 3R + 24770640 24770739 3'utr CG13631 FlyBase G34359.1 GTATGTGCCGCACGAGGAGAGGGAACTCAAAATTGTGCCCCCAAATGGGTGGTGGATGGTGTTTGCTCAAGTGATTCGTACTAAAATGGCAGCGGGAATG 35 24770674 0.9877235 14 32 172 0.928571429 1.716003344 0.321428571 0.371428571 0.607142857 35 4 0 52 3R:24770640-24770739 6 22 2035 FBgn0040600 1409.473333 109.07 167.31 0.015608667 0.201705327 0.131492439 -1 -1 -1 0.25 dme-miR-1006-3p 7mer-A1 GAATTTA 3R 24770792 24770798 + 3R_24770792_24770798_+ 0.472676442 0.635991316 0.554333879 0.115481073 CG13631 FBtr0339253 24769772 24770933 3R + 24770747 24770825 3'utr CG13631 FlyBase G45546.1 TCGCAGAGTGAGAAGTGCTGTAAGTGGCGAATGTTTCGAATGAGAGAATTTAGTTTAGAGAGCGGAGCATCTACAATAT 24 24770796 0.978983812 11 23 159 0.965517241 1.447158031 0.275862069 0.166666667 0.310344828 24 1 0 28 3R:24770747-24770825 7 CG13631 FBtr0339253 24769772 24770933 GAATTTA 7mer-A1 dme-miR-1006-3p 3R + 24770745 24770844 3'utr CG13631 FlyBase G34360.1 AATCGCAGAGTGAGAAGTGCTGTAAGTGGCGAATGTTTCGAATGAGAGAATTTAGTTTAGAGAGCGGAGCATCTACAATATATTTATTATACCTATGAAA 24 24770799 0.978507157 13 22 149 0.967741935 1.176091259 0.129032258 0.260869565 0.451612903 23 0 1 30 3R:24770745-24770844 7 16.5 2036 FBgn0040600 1409.473333 109.07 167.31 0.0117065 0.151278995 0.098619329 -4 -7 -5.5 0.25 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 24784792 24784798 - 3R_24784792_24784798_- 0.618259119 0.659619212 0.638939166 0.029246007 CG5805 FBtr0339255|FBtr0084743 24784550|24784735 24785395|24785395 3R - 24784737 24784855 3'utr CG5805 FlyBase G54348.1 GGGTCGCCCCTCCCCAGAGGTCGGGAGGCACTACACTTAGCTAAGCATTCGTGTGTGTGTGTTCTCTGAGTGGATAAACTAGTTTTAGTCTGCATTATAATAAAGTACAAACCAAGAAT 24 24784789 0.98179833 14 22 188 0.935483871 1.462397998 0.258064516 0.291666667 0.451612903 24 2 0 29 3R:24784737-24784855 7 CG5805 FBtr0339255|FBtr0084743 24784550|24784735 24785395|24785395 TGTGTTC 7mer-m8 dme-miR-317-3p 3R - 24784739 24784819 3'utr CG5805 FlyBase G41044.1 TTAGCTAAGCATTCGTGTGTGTGTGTTCTCTGAGTGGATAAACTAGTTTTAGTCTGCATTATAATAAAGTACAAACCAAGA 13 24784799 0.986793487 7 12 99 1 1.204119983 0.5 0.230769231 0.375 13 0 0 16 3R:24784739-24784819 7 9.5 2037 FBgn0039223 334.22 19.37333333 29.52666667 0.028424391 0.490364763 0.321743057 -9 1 -4 0.25 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 24805499 24805506 - 3R_24805499_24805506_- 0.374066493 0.379092238 0.376579366 0.003553707 CG5807 FBtr0331697 24805443 24805557 3R - 24805486 24805534 3'utr CG5807 FlyBase G54386.2 AATTTAAGGAAAACTACCTACGATATTGCTGTGATTCAATGACTTAATT 19 24805509 0.981679455 7 18 145 0.958333333 1.361727836 0.083333333 0.157894737 0.333333333 19 1 0 23 3R:24805486-24805534 8 CG5807 FBtr0331697 24805443 24805557 CTGTGATT 8mer-m1 dme-miR-308-3p 3R - 24805451 24805529 3'utr CG5807 FlyBase G41070.1 AAGGAAAACTACCTACGATATTGCTGTGATTCAATGACTTAATTAAAACTTTAAATGATGCTTTAGGGATGCTATAATA 22 24805508 0.771724634 10 22 195 1 1.556302501 0.222222222 0.363636364 0.611111111 22 0 0 36 3R:24805451-24805529 8 15.5 2038 FBgn0027539 323.6833333 14.69666667 22.53666667 0.047886309 1.054660921 0.687768082 3 2 2.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 24805706 24805712 - 3R_24805706_24805712_- 0.747351511 0.748711694 0.748031603 0.000961807 CG5807 FBtr0084739|FBtr0084739|FBtr0084739 24805665|24805665|24805665 24806410|24806410|24806410 3R - 24805666 24805734 3'utr CG5807 FlyBase G54387.1 ACTAACAAGCGTCTAAAACTTATGTGATAAAAAATAATAATAAACAAAGCATTTTACTAAATTAATCGA 84 24805714 0.976377962 5 80 517 0.95959596 1.977723605 0.090909091 0.130952381 0.262626263 84 4 0 95 3R:24805666-24805734 7 CG5807 FBtr0084739|FBtr0084739|FBtr0084739 24805665|24805665|24805665 24806410|24806410|24806410 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 24805689 24805736 3'utr CG5807 FlyBase G41071.1 ACACTAACAAGCGTCTAAAACTTATGTGATAAAAAATAATAATAAACA 64 24805714 0.803519252 7 61 386 0.966666667 1.939519253 0.133333333 0.359375 0.544444444 64 3 0 87 3R:24805689-24805736 7 73 2039 FBgn0027539 323.6833333 14.69666667 22.53666667 0.225529066 4.967112724 3.239165804 2 2 2 0.25 dme-miR-2a-2-5p 7mer-m1 GATGAGG 3R 24805795 24805801 - 3R_24805795_24805801_- 0.679167436 0.752197268 0.715682352 0.051639938 CG5807 FBtr0084739 24805665 24806410 3R - 24805774 24805836 3'utr CG5807 FlyBase G54388.1 ATAAGATTTTAACAATGTTCCTTAAGCAGCGAAACGATGAGGCGTGTTCATTTCATTTTACGG 110 24805821 0.977067508 9 107 648 0.9609375 1.788875116 0.0625 0.154545455 0.2734375 110 4 1 123 3R:24805774-24805836 7 CG5807 FBtr0084739 24805665 24806410 GATGAGG 7mer-m1 dme-miR-2a-2-5p 3R - 24805785 24805834 3'utr CG5807 FlyBase G41072.1 AAGATTTTAACAATGTTCCTTAAGCAGCGAAACGATGAGGCGTGTTCATT 70 24805821 0.983464342 4 68 395 0.982608696 1.752048448 0.113043478 0.471428571 0.67826087 70 1 1 113 3R:24805785-24805834 7 38 2040 FBgn0027539 323.6833333 14.69666667 22.53666667 0.117398692 2.585620322 1.686141103 20 20 20 0.25 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 24806206 24806212 - 3R_24806206_24806212_- 0.628862237 0.65087051 0.639866374 0.015562218 CG5807 FBtr0084739 24805665 24806410 3R - 24806106 24806315 3'utr CG5807 FlyBase G54391.2 TACCAAGTATCGTAACCTTAGTCGTAAGAGCAGTCGCAATACCACCGCTAGTCGCAAGGCAAACGAAATGAACTGTTAAGACACGAGAAAAACATGGGAGATGGGCAGCTGAAACTATATAATATACCTTTACATATGTTATATGATCACGTATAGTTGTGCAGAACTGATACTAATATTTAAATTTTGCAATGTTAACTGTTGTGCTTA 83 24806214 0.912604631 24 76 433 0.91 1.481920138 0.16 0.180722892 0.32 83 7 2 91 3R:24806106-24806315 7 CG5807 FBtr0084739 24805665 24806410 GGCAGCT 7mer-m8 dme-miR-980-3p 3R - 24806189 24806287 3'utr CG5807 FlyBase G41075.1 AGCAGTCGCAATACCACCGCTAGTCGCAAGGCAAACGAAATGAACTGTTAAGACACGAGAAAAACATGGGAGATGGGCAGCTGAAACTATATAATATAC 23 24806214 0.824993052 7 21 65 0.911764706 1.491361694 0.147058824 0.391304348 0.588235294 23 3 0 31 3R:24806189-24806287 7 20.5 2041 FBgn0027539 323.6833333 14.69666667 22.53666667 0.063333505 1.394874121 0.909628753 2 2 2 0.25 dme-bantam-3p 6mer3-8 TGATCT 3R 24854437 24854442 + 3R_24854437_24854442_+ 0.862731752 0.898622846 0.880677299 0.025378769 nct FBtr0301865|FBtr0306087|FBtr0334570|FBtr0084705 24854236|24854089|24854385|24854236 24854869|24854569|24854869|24854569 3R + 24854393 24854498 3'utr nct FlyBase G45585.1 AAAGAATATCTGATCACGTGCCGAAGATGATTGGTTGCTGAATATGATCTAAAACAAAAAACAGACTTAACAAAGACACTAAAATGATATTCTAACTCGTCTTATT 108 24854437 0.979653696 13 104 720 0.96031746 2.08278537 0.03968254 0.148148148 0.26984127 108 5 0 121 3R:24854393-24854498 6 nct FBtr0334570|FBtr0301865|FBtr0306087 24854385|24854236|24854089 24854869|24854869|24854569 TGATCT 6mer3-8 dme-bantam-3p 3R + 24854408 24854502 3'utr nct FlyBase G34380.2 ACGTGCCGAAGATGATTGGTTGCTGAATATGATCTAAAACAAAAAACAGACTTAACAAAGACACTAAAATGATATTCTAACTCGTCTTATTTAAA 81 24854437 0.747772255 16 76 525 0.915254237 1.556302501 0.033898305 0.345679012 0.550847458 81 8 2 108 3R:24854408-24854502 6 77 2042 FBgn0039234 994.94 43.80666667 67.10333333 0.077391602 1.75772333 1.14748398 0 0 0 0.25 dme-miR-965-3p 7mer-m8 TACGCTT 3R 24868756 24868762 - 3R_24868756_24868762_- 0.405997708 0.559341752 0.48266973 0.108430653 CycB3 FBtr0334578 24867932 24868800 3R - 24868585 24868800 3'utr CycB3 FlyBase G54409.1 GACAGCCTCAAAGTTTAGCCAAATTCAACATGATACGATACGCTTCACTTAGGCTCTAAGACGCTTCTATTCCCAATATTAGCCCCATCCCGACGAAACAGCGGATCCCCGCCTTAATCTAAAAACCCCTGATTTTACCCCTTACCTAGTGTTCCCGTCAAGTCCTCGCAATTTATTATATTTTAATTATTATTGTGACCTTCGCATTATTGACAT 260 24868762 0.999926671 28 239 1955 0.919732441 1.594234654 0.163879599 0.130769231 0.244147157 260 18 6 275 3R:24868585-24868800 7 CycB3 FBtr0084728|FBtr0334578 24868354|24867932 24868800|24868800 TACGCTT 7mer-m8 dme-miR-965-3p 3R - 24868631 24868801 stop_codon CycB3 FlyBase G41090.1 GGACAGCCTCAAAGTTTAGCCAAATTCAACATGATACGATACGCTTCACTTAGGCTCTAAGACGCTTCTATTCCCAATATTAGCCCCATCCCGACGAAACAGCGGATCCCCGCCTTAATCTAAAAACCCCTGATTTTACCCCTTACCTAGTGTTCCCGTCAAGTCCTCGCA 106 24868762 0.983092285 20 95 716 0.90797546 1.471291711 0.233128834 0.358490566 0.582822086 106 11 4 148 3R:24868631-24868801 7 122 2043 FBgn0015625 158.3333333 6.95 10.59666667 0.770526316 17.55395683 11.51305442 0 0 0 0.25 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3R 24922285 24922290 + 3R_24922285_24922290_+ 0.760554196 0.94212934 0.851341768 0.128392985 CG11168 FBtr0306089|FBtr0084715|FBtr0337009|FBtr0337010 24920050|24922185|24922185|24922185 24922385|24922385|24922385|24922385 3R + 24922272 24922352 3'utr CG11168 FlyBase G45600.1 TTTTACTCATTTGCTAGTCGTTGATGCCATCTCGATGCTGGCTTTGCTCCACATAAGGCAGCTCACATGTTAAGTATTTTG 31 24922283 0.773283678 12 30 262 0.973684211 1.568201724 0.157894737 0.193548387 0.342105263 31 1 0 37 3R:24922272-24922352 6 CG11168 FBtr0337010|FBtr0337009|FBtr0084715|FBtr0306089 24922185|24922185|24922185|24920050 24922385|24922385|24922385|24922385 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3R + 24922269 24922337 3'utr CG11168 FlyBase G34389.1 TTTTTTTACTCATTTGCTAGTCGTTGATGCCATCTCGATGCTGGCTTTGCTCCACATAAGGCAGCTCAC 28 24922282 0.946826023 9 27 216 0.888888889 1.602059991 0.311111111 0.392857143 0.622222222 28 5 0 40 3R:24922269-24922337 6 23.5 2044 FBgn0039249 138.3333333 5.443333333 8.356666667 0.169879518 4.317207593 2.812126047 2 3 2.5 0.25 dme-bantam-3p 6mer3-8 TGATCT 3R 24935214 24935219 - 3R_24935214_24935219_- 0.960093401 0.869118071 0.914605736 0.064329252 Osbp FBtr0084801 24934867 24935398 3R - 24935195 24935240 3'utr Osbp FlyBase G54445.1 GCATATTGTAGTACCACACTTTGATCTAGAGCATATTTATATATAT 43 24935220 0.715473304 6 42 296 0.962264151 1.707570176 0.132075472 0.209302326 0.358490566 43 2 0 51 3R:24935195-24935240 6 Osbp FBtr0084801 24934867 24935398 TGATCT 6mer3-8 dme-bantam-3p 3R - 24935194 24935279 3'utr Osbp FlyBase G41117.1 AGCGGGACACGCTCCGACTGATTTCGGAGCAGCACATACGCATATTGTAGTACCACACTTTGATCTAGAGCATATTTATATATATA 36 24935220 0.846820347 7 35 210 0.964912281 1.740362689 0.105263158 0.444444444 0.649122807 36 2 0 55 3R:24935194-24935279 6 32 2045 FBgn0020626 533.3433333 19.94666667 30.62 0.059998875 1.604278075 1.045068583 1 1 1 0.25 dme-miR-252-5p 6mer3-8 GTACTT 3R 24939081 24939086 - 3R_24939081_24939086_- 0.998773404 0.936854479 0.967813942 0.043783274 ssh FBtr0084799|FBtr0301612|FBtr0084800|FBtr0301613 24938708|24939001|24939001|24939001 24939428|24939804|24939428|24939804 3R - 24939010 24939126 3'utr ssh FlyBase G54460.1 GAGGGCAAACAAAACAACCTATGGAAATGAAACTGTATTTGTACTTTTAAATTACTTGTAACTGTATACATATTTATTTTATATTATGCAAGAACTGCCTACGAATAAACGATTTAT 48 24939105 0.982895212 16 45 339 0.925925926 1.698970004 0.074074074 0.125 0.222222222 48 4 0 50 3R:24939010-24939126 6 ssh FBtr0084800|FBtr0301613|FBtr0084799|FBtr0301612 24939001|24939001|24938708|24939001 24939428|24939804|24939428|24939804 GTACTT 6mer3-8 dme-miR-252-5p 3R - 24939006 24939128 3'utr ssh FlyBase G41125.1 GAGAGGGCAAACAAAACAACCTATGGAAATGAAACTGTATTTGTACTTTTAAATTACTTGTAACTGTATACATATTTATTTTATATTATGCAAGAACTGCCTACGAATAAACGATTTATTGTA 30 24939105 0.97558687 11 28 187 0.926829268 1.278753601 0.219512195 0.366666667 0.536585366 30 2 1 38 3R:24939006-24939128 6 11.5 2046 FBgn0029157 492.83 13.26666667 20.39666667 0.023334618 0.866834171 0.563817617 19 19 19 0.25 dme-miR-1012-3p 6mer2-7 TGACTA 3R 25029661 25029666 - 3R_25029661_25029666_- 0.707723022 0.975961867 0.841842444 0.189673545 Smg6 FBtr0084796 25029427 25029778 3R - 25029617 25029708 3'utr Smg6 FlyBase G54482.1 GGAGCGAGCTCGAGCTATTATATTACCTACATTATACATAAATGACTATGTAAGACGGGGTCGGCAGATGCGGACACATACGCTGGCTGCGG 11 25029686 0.968148557 6 10 58 0.846153846 1.041392685 0.461538462 0.181818182 0.307692308 11 2 0 11 3R:25029617-25029708 6 Smg6 FBtr0084796 25029427 25029778 TGACTA 6mer2-7 dme-miR-1012-3p 3R - 25029617 25029696 3'utr Smg6 FlyBase G41140.1 AGCTATTATATTACCTACATTATACATAAATGACTATGTAAGACGGGGTCGGCAGATGCGGACACATACGCTGGCTGCGG 7 25029677 0.988423747 6 6 41 0.9 0.954242509 0.1 0.428571429 0.6 7 1 0 9 3R:25029617-25029696 6 3.5 2047 FBgn0039260 358.6633333 12.99666667 19.73666667 0.009758455 0.26929982 0.17733491 20 11 15.5 0.25 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG 3R 25040529 25040535 - 3R_25040529_25040535_- 0.634112472 0.648989169 0.641550821 0.010519415 5PtaseI FBtr0299660|FBtr0299662 25040425|25040425 25040818|25040600 3R - 25040513 25040542 3'utr 5PtaseI FlyBase G54506.1 GTGTTATGTACCTGTTATGTTAAACGCGTC 18 25040536 0.736106242 4 17 181 0.947368421 1.255272505 0.842105263 0.055555556 0.105263158 18 1 0 18 3R:25040513-25040542 7 5PtaseI FBtr0299662|FBtr0299660 25040425|25040425 25040600|25040818 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 25040511 25040543 3'utr 5PtaseI FlyBase G41157.1 TGTGTTATGTACCTGTTATGTTAAACGCGTCCA 11 25040536 0.870601188 4 11 109 1 1.278753601 0.526315789 0.454545455 0.684210526 11 0 0 19 3R:25040511-25040543 7 14.5 2048 FBgn0259178 182.6666667 9.633333333 14.71333333 0.079379562 1.505190311 0.98550068 1 1 1 0.25 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 25041103 25041109 - 3R_25041103_25041109_- 0.659715787 0.660581892 0.660148839 0.000612425 5PtaseI FBtr0299661 25041064 25041727 3R - 25041089 25041156 3'utr 5PtaseI FlyBase G54507.1 AAACTATTTCTTTGAATCTGTGTTTTAAGTATGTACATTGTTTATTATGTGTTCGTCTTCTTTAAGAA 25 25041109 0.707009066 10 22 307 0.833333333 1.397940009 0.366666667 0.16 0.3 25 5 0 25 3R:25041089-25041156 7 5PtaseI FBtr0299661 25041064 25041727 TGTGTTC 7mer-m8 dme-miR-317-3p 3R - 25041088 25041122 3'utr 5PtaseI FlyBase G41158.1 ACATTGTTTATTATGTGTTCGTCTTCTTTAAGAAA 18 25041111 0.683460874 8 14 224 0.826086957 0.801632346 0.260869565 0.166666667 0.347826087 18 2 2 19 3R:25041088-25041122 7 17 2049 FBgn0259178 182.6666667 9.633333333 14.71333333 0.093065693 1.764705882 1.15541459 0 2 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 25099598 25099603 + 3R_25099598_25099603_+ 0.999892988 0.98067994 0.990286464 0.013585713 CG33096 FBtr0301976|FBtr0301976|FBtr0301976|FBtr0301975|FBtr0301975|FBtr0301975|FBtr0114464|FBtr0114464|FBtr0114464 25099278|25099278|25099278|25099278|25099278|25099278|25099278|25099278|25099278 25099785|25099785|25099785|25099785|25099785|25099785|25099785|25099785|25099785 3R + 25099584 25099626 3'utr CG33096 FlyBase G45705.1 CATTCTTACAGCATTGTGATCCTGGTCCCCGTATTAATTGAAT 22 25099597 0.632671549 7 22 168 1 1.414973348 0.269230769 0.181818182 0.307692308 22 0 0 26 3R:25099584-25099626 6 CG33096 FBtr0301976|FBtr0301976|FBtr0301976|FBtr0114464|FBtr0114464|FBtr0114464|FBtr0301975|FBtr0301975|FBtr0301975 25099278|25099278|25099278|25099278|25099278|25099278|25099278|25099278|25099278 25099785|25099785|25099785|25099785|25099785|25099785|25099785|25099785|25099785 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 25099578 25099631 3'utr CG33096 FlyBase G34464.1 GATCCCCATTCTTACAGCATTGTGATCCTGGTCCCCGTATTAATTGAATAAGCA 21 25099597 0.71950174 5 19 162 0.90625 1.161368002 0.5 0.380952381 0.59375 21 2 1 29 3R:25099578-25099631 6 21 2050 FBgn0053096 531.5033333 20.77333333 31.74 0.039510571 1.010911425 0.661625709 1 1 1 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 25101960 25101967 + 3R_25101960_25101967_+ 0.622387138 0.623233938 0.622810538 0.000598778 CG33095 FBtr0100204|FBtr0084774 25101745|25101745 25102146|25102146 3R + 25101921 25101979 3'utr CG33095 FlyBase G45710.1 TTTAGTAGTACCTTAAGTTTGAAATTTTTACAGTGATTTTGCATTTATATTAAGTAACA 34 25101959 0.991963354 7 34 383 1 1.633468456 0.046511628 0.264705882 0.418604651 34 0 0 43 3R:25101921-25101979 8 CG33095 FBtr0084774|FBtr0100204 25101745|25101745 25102146|25102146 TGCATTTA 8mer-A1 dme-miR-277-3p 3R + 25101935 25101978 3'utr CG33095 FlyBase G34468.1 AAGTTTGAAATTTTTACAGTGATTTTGCATTTATATTAAGTAAC 29 25101959 0.716080602 6 28 311 0.97826087 1.653212514 0.043478261 0.310344828 0.565217391 29 1 0 45 3R:25101935-25101978 8 31 2051 FBgn0053095 476.96 16.58 25.46 0.064994968 1.869722557 1.217596229 1 1 1 0.25 dme-miR-2b-2-5p 6mer2-7 TGAAGA 3R 25224059 25224064 + 3R_25224059_25224064_+ 0.492443747 0.505831853 0.4991378 0.009466887 CG11851 FBtr0084808 25223739 25224118 3R + 25224033 25224071 3'utr CG11851 FlyBase G45738.1 TTTTCGTTTTGTCCATGCCAAAGTTGTGAAGATCACCAG 17 25224056 0.782408185 3 14 111 0.882352941 0.875061263 0.411764706 0.0625 0.117647059 16 1 1 15 3R:25224033-25224071 6 CG11851 FBtr0084808 25223739 25224118 TGAAGA 6mer2-7 dme-miR-2b-2-5p 3R + 25224032 25224074 3'utr CG11851 FlyBase G34488.1 ATTTTCGTTTTGTCCATGCCAAAGTTGTGAAGATCACCAGAAT 11 25224048 0.890811743 6 10 79 0.941176471 0.903089987 0.529411765 0.454545455 0.647058824 11 0 1 16 3R:25224032-25224074 6 11.5 2052 FBgn0039293 588.9733333 30.00333333 45.61333333 0.019525502 0.383290745 0.252119263 3 11 7 0.25 dme-miR-11-3p 7mer-m1 TGTGATG 3R 25233928 25233934 - 3R_25233928_25233934_- 0.464935017 0.460116263 0.46252564 0.003407335 CG10420 FBtr0084870 25233634 25234044 3R - 25233811 25233994 3'utr CG10420 FlyBase G54597.1 TGAGTTGGAATGAAATTCGCAGCCAAACCATAGAATACGATAGCTAAGATGCCAAGTACTTGTGATGCAAAAATAATGCTCTTTGTCATTAACTTAGGATAGCAATCAATCATGCCAAACATCTACAGGATTTTCGTTATCAAATATAGTCTCTTACTTAAGATTATTTTAAGTGTGATTTTTT 198 25233935 0.876666322 33 186 1262 0.918803419 1.429348473 0.179487179 0.136363636 0.269230769 198 12 7 215 3R:25233811-25233994 7 CG10420 FBtr0084870 25233634 25234044 TGTGATG 7mer-m1 dme-miR-11-3p 3R - 25233820 25233996 3'utr CG10420 FlyBase G41214.1 GCTGAGTTGGAATGAAATTCGCAGCCAAACCATAGAATACGATAGCTAAGATGCCAAGTACTTGTGATGCAAAAATAATGCTCTTTGTCATTAACTTAGGATAGCAATCAATCATGCCAAACATCTACAGGATTTTCGTTATCAAATATAGTCTCTTACTTAAGATTATTTTAAGTG 124 25233935 0.93320124 19 113 751 0.944723618 1.496006599 0.190954774 0.427419355 0.64321608 124 6 5 188 3R:25233820-25233996 7 116.5 2053 FBgn0039296 113.6666667 7.593333333 11.63333333 1.024926686 15.34240562 10.01432665 1 1 1 0.25 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 25260357 25260362 + 3R_25260357_25260362_+ 0.998958418 0.951512649 0.975235534 0.033549247 CG11857 FBtr0084814 25260035 25260759 3R + 25260330 25260401 3'utr CG11857 FlyBase G45796.1 CACTGTTGAGTTGTCGTACGGCGTCTTGTGCAAAATACCTTGTTTATTGTTTAATCTAACTGCTTGTTTAAA 30 25260356 0.899577833 12 29 245 1 1.556302501 0.055555556 0.133333333 0.277777778 30 0 0 36 3R:25260330-25260401 6 CG11857 FBtr0084814 25260035 25260759 GTGCAA 6mer3-8 dme-miR-92b-3p 3R + 25260329 25260403 3'utr CG11857 FlyBase G34546.1 TCACTGTTGAGTTGTCGTACGGCGTCTTGTGCAAAATACCTTGTTTATTGTTTAATCTAACTGCTTGTTTAAATT 35 25260355 0.738979637 11 29 279 0.795918367 1.290034611 0.020408163 0.285714286 0.489795918 35 9 1 39 3R:25260329-25260403 6 25.5 2054 FBgn0039303 1484.506667 100.39 153.7466667 0.017177424 0.254009363 0.165857254 1 2 1.5 0.25 dme-miR-12-5p 6mer3-8 AATACT 3R 25260455 25260460 + 3R_25260455_25260460_+ 0.994272309 0.99981463 0.997043469 0.003918998 CG11857 FBtr0084814 25260035 25260759 3R + 25260424 25260488 3'utr CG11857 FlyBase G45797.1 TCTATCTATTGTAAATCCCAAACGATACCGAAATACTGCAGATCAGCTCTAATTTAGTTTTTCAT 35 25260449 0.923555346 7 33 215 0.952380952 1.602059991 0.166666667 0.171428571 0.30952381 35 2 0 40 3R:25260424-25260488 6 CG11857 FBtr0084814 25260035 25260759 AATACT 6mer3-8 dme-miR-12-5p 3R + 25260434 25260489 3'utr CG11857 FlyBase G34547.1 GTAAATCCCAAACGATACCGAAATACTGCAGATCAGCTCTAATTTAGTTTTTCATC 17 25260457 0.70451467 5 16 85 0.958333333 1.361727836 0.041666667 0.352941176 0.541666667 17 1 0 23 3R:25260434-25260489 6 23.5 2055 FBgn0039303 1484.506667 100.39 153.7466667 0.015830175 0.23408706 0.152848842 6 -2 2 0.25 dme-miR-8-3p 6mer2-7 AGTATT 3R 25261224 25261229 - 3R_25261224_25261229_- 0.999551342 0.997337144 0.998444243 0.001565676 CG10425 FBtr0084867 25260961 25261255 3R - 25261203 25261247 3'utr CG10425 FlyBase G54611.1 TTGTCCCGCTGCCCTTAAAGTATTCCCAAGTGCCCATAATTAAAT 13 25261226 0.620116571 7 12 86 0.923076923 1.079181246 0.076923077 0 0 13 1 0 12 3R:25261203-25261247 6 CG10425 FBtr0084867 25260961 25261255 AGTATT 6mer2-7 dme-miR-8-3p 3R - 25261202 25261269 stop_codon CG10425 FlyBase G41225.1 TGGAGTCCAAGTGAAATCTCTCTTGTCCCGCTGCCCTTAAAGTATTCCCAAGTGCCCATAATTAAATC 12 25261225 0.984016065 5 10 76 0.851851852 1.361727836 0.407407407 0.833333333 0.925925926 12 4 0 23 3R:25261202-25261269 6 11 2056 FBgn0039304 196.3333333 17.07333333 25.98666667 0.056027165 0.644279578 0.423293997 -3 -4 -3.5 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 25303944 25303951 + 3R_25303944_25303951_+ 0.444772389 0.43456281 0.439667599 0.007219277 CG31370 FBtr0290055 25303865 25303986 3R + 25303926 25303984 3'utr CG31370 FlyBase G45812.1 ATGAGCGTTCCATTATATGTACTTAATAAAGTGTATAAGGCTATTGTTTTGATATCGCT 20 25303943 0.933594614 3 17 182 0.88 1.041392685 0.32 0.25 0.4 20 2 1 22 3R:25303926-25303984 8 CG31370 FBtr0290055 25303865 25303986 GTACTTAA 8mer-A1 dme-miR-252-5p 3R + 25303927 25303973 3'utr CG31370 FlyBase G34556.1 TGAGCGTTCCATTATATGTACTTAATAAAGTGTATAAGGCTATTGTT 18 25303943 0.765026138 3 17 153 0.914285714 1.505149978 0.314285714 0.555555556 0.771428571 18 3 0 32 3R:25303927-25303973 8 15.5 2057 FBgn0051370 220 19.25 29.63 0.070454545 0.805194805 0.523118461 1 1 1 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3R 25331532 25331538 - 3R_25331532_25331538_- 0.504454125 0.519018206 0.511736165 0.010298374 CG10669 FBtr0300687 25331361 25331774 3R - 25331507 25331559 3'utr CG10669 FlyBase G54646.1 TAATAAATTAAAACAATACTGTGTGATTAAAAGGGGAATAGTTTGTAGTTTGT 29 25331540 0.722624947 6 27 190 0.939393939 1.491361694 0.090909091 0.137931034 0.242424242 29 2 0 31 3R:25331507-25331559 7 CG10669 FBtr0300687 25331361 25331774 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 25331508 25331556 3'utr CG10669 FlyBase G41251.1 TAAATTAAAACAATACTGTGTGATTAAAAGGGGAATAGTTTGTAGTTTG 19 25331540 0.972831485 4 16 140 0.791666667 1.278753601 0.083333333 0.263157895 0.416666667 19 5 0 19 3R:25331508-25331556 7 22.5 2058 FBgn0039329 90.66666667 3.293333333 4.993333333 0.248161765 6.831983806 4.506008011 2 2 2 0.25 dme-miR-988-3p 7mer-m8 ACAAGGG 3R 25340067 25340073 + 3R_25340067_25340073_+ 0.665924731 0.62608326 0.646003996 0.028172124 CG11902 FBtr0300735 25339910 25340088 3R + 25340055 25340087 3'utr CG11902 FlyBase G45830.1 AAAAATAAAATTACAAGGGTTACAAATAAACGA 12 25340074 0.758450375 2 12 50 1 1.176091259 0 0.166666667 0.333333333 12 0 0 15 3R:25340055-25340087 7 CG11902 FBtr0300735 25339910 25340088 ACAAGGG 7mer-m8 dme-miR-988-3p 3R + 25340044 25340084 3'utr CG11902 FlyBase G34568.1 AATGTAAAGATAAAAATAAAATTACAAGGGTTACAAATAAA 18 25340074 0.946825159 2 18 78 1 1.361727836 0 0.222222222 0.391304348 18 0 0 23 3R:25340044-25340084 7 15 2059 FBgn0028647 178 4.693333333 7.203333333 0.084269663 3.196022727 2.082369273 -7 -7 -7 0.25 dme-miR-14-3p 7mer-m8 AAGACTG 3R 25493192 25493198 + 3R_25493192_25493198_+ 0.669665151 0.669328183 0.669496667 0.000238295 CG5112 FBtr0084878 25493128 25493262 3R + 25493133 25493204 3'utr CG5112 FlyBase G45851.1 GTTTATGATGTATGATCGATCAACTTATTGTTAGAGAACATAGGGTGTGGGTAACGCTGAAGACTGTCGCTT 33 25493190 0.970304922 10 30 174 0.918918919 1.531478917 0.378378378 0.090909091 0.189189189 33 3 0 34 3R:25493133-25493204 7 CG5112 FBtr0084878 25493128 25493262 AAGACTG 7mer-m8 dme-miR-14-3p 3R + 25493136 25493204 3'utr CG5112 FlyBase G34581.1 TATGATGTATGATCGATCAACTTATTGTTAGAGAACATAGGGTGTGGGTAACGCTGAAGACTGTCGCTT 30 25493190 0.966748859 10 30 163 1 1.602059991 0.25 0.3 0.475 30 0 0 40 3R:25493136-25493204 7 25 2060 FBgn0039341 334.3133333 22.37333333 33.99666667 0.074780146 1.117401669 0.735366212 2 2 2 0.25 dme-miR-304-5p 8mer-A1 TGAGATTA 3R 25493955 25493962 - 3R_25493955_25493962_- 0.622066372 0.622609183 0.622337778 0.000383818 CG33494 FBtr0089607|FBtr0336802 25493577|25493479 25494014|25494014 3R - 25493909 25494021 stop_codon CG33494 FlyBase G54708.1 TGGGTAACCAGTTCCAAAGTCCACTTAGTCTTTGCTCTCGAATCGGTCATCCAAGCCTTTGAGATTACATTTAAATATGTCATGAAATACATAGCATGATATACATACATATA 64 25493963 0.9826232 14 60 522 0.930555556 1.826074803 0.125 0.109375 0.208333333 64 5 0 67 3R:25493909-25494021 8 CG33494 FBtr0336802|FBtr0089607 25493479|25493577 25494014|25494014 TGAGATTA 8mer-A1 dme-miR-304-5p 3R - 25493947 25494006 3'utr CG33494 FlyBase G41296.1 AAAGTCCACTTAGTCTTTGCTCTCGAATCGGTCATCCAAGCCTTTGAGATTACATTTAAA 25 25493963 0.763605717 8 22 199 0.921052632 1.243038049 0.131578947 0.4 0.605263158 25 2 1 35 3R:25493947-25494006 8 32 2061 FBgn0053494 1664.706667 279.3966667 423.6866667 0.019222606 0.114532505 0.075527512 1 1 1 0.25 dme-miR-8-3p 7mer-A1 AGTATTA 3R 25600961 25600967 + 3R_25600961_25600967_+ 0.81643572 0.798141533 0.807288626 0.012935953 msi FBtr0305219|FBtr0333664|FBtr0084881|FBtr0333665|FBtr0084882|FBtr0333663|FBtr0305218 25600746|25600746|25600746|25600746|25600746|25600746|25600746 25601136|25608423|25601136|25601136|25602421|25601136|25601136 3R + 25600901 25600982 5'utr msi FlyBase G45863.1 GAAGTTGGTTTTCCTTTGAGTTTGGCTAAGTTAGTAGTCCGATACACGGAAGGCAAATTAAGTATTATATTTAAGGCGCCCT 20 25600958 0.916346268 9 19 162 0.956521739 1.342422681 0.304347826 0.15 0.260869565 20 1 0 22 3R:25600901-25600982 7 msi FBtr0333663|FBtr0305218|FBtr0084882|FBtr0084881|FBtr0333665|FBtr0305219|FBtr0333664 25600746|25600746|25600746|25600746|25600746|25600746|25600746 25601136|25601136|25602421|25601136|25601136|25601136|25608423 AGTATTA 7mer-A1 dme-miR-8-3p 3R + 25600914 25600972 5'utr msi FlyBase G34587.1 CTTTGAGTTTGGCTAAGTTAGTAGTCCGATACACGGAAGGCAAATTAAGTATTATATTT 7 25600958 0.899608728 6 7 52 1 1.113943352 0.076923077 0.571428571 0.769230769 7 0 0 13 3R:25600914-25600972 7 7 2062 FBgn0011666 1019.796667 32.88 50.09666667 0.006864113 0.212895377 0.139729856 3 3 3 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 25601698 25601705 + 3R_25601698_25601705_+ 0.498136964 0.498998424 0.498567694 0.000609102 msi FBtr0333664|FBtr0084882 25600746|25600746 25608423|25602421 3R + 25601676 25601729 3'utr msi FlyBase G45869.1 CTATCTACCCAAATCTGTTATTGTACTTAATTATATAACAATTACAAATACCAC 38 25601697 0.760864444 5 38 424 1 1.681241237 0.020833333 0.184210526 0.354166667 38 0 0 48 3R:25601676-25601729 8 msi FBtr0084882|FBtr0333664 25600746|25600746 25602421|25608423 GTACTTAA 8mer-A1 dme-miR-252-5p 3R + 25601668 25601720 3'utr msi FlyBase G34590.1 CCTACCTTCTATCTACCCAAATCTGTTATTGTACTTAATTATATAACAATTAC 24 25601697 0.956187348 5 24 260 1 1.579783597 0 0.375 0.605263158 24 0 0 38 3R:25601668-25601720 8 30 2063 FBgn0011666 1019.796667 32.88 50.09666667 0.029417629 0.912408759 0.598842238 1 1 1 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 3R 25602762 25602769 + 3R_25602762_25602769_+ 0.59540994 0.562882566 0.579146253 0.023000274 msi FBtr0333664 25600746 25608423 3R + 25602742 25602788 3'utr msi FlyBase G45874.1 AATGTAATATTGTTTCGTATACCAAAGATAACGCATATTAACCCAAA 71 25602761 0.877322409 4 64 465 0.913043478 1.924279286 0.163043478 0.197183099 0.380434783 71 8 0 84 3R:25602742-25602788 8 msi FBtr0333664 25600746 25608423 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 25602721 25602784 3'utr msi FlyBase G34593.1 TTCGACTCGGGGGGTGAGTATAATGTAATATTGTTTCGTATACCAAAGATAACGCATATTAACC 54 25602761 0.977073429 4 51 335 0.933333333 1.84509804 0.173333333 0.277777778 0.48 54 5 0 70 3R:25602721-25602784 8 61.5 2064 FBgn0011666 1019.796667 32.88 50.09666667 0.060306139 1.870437956 1.227626589 1 1 1 0.25 dme-miR-263a-5p 8mer-m1 GTGCCATT 3R 25602908 25602915 + 3R_25602908_25602915_+ 0.536578624 0.496993573 0.516786098 0.027990822 msi FBtr0333664 25600746 25608423 3R + 25602803 25602924 3'utr msi FlyBase G45875.1 GCTGGGCCTAAGTCGAGGCTCAAATACCACATCTCCATTTGCAGAAACTAATTTATTTATTTATTATTTACGCTTAAGAATCTAACACATTCCAGACATGCTATGGTGCCATTTACTTATCC 35 25602906 0.951635923 12 34 266 0.976190476 1.612783857 0.023809524 0.171428571 0.30952381 35 1 0 41 3R:25602803-25602924 8 msi FBtr0333664 25600746 25608423 GTGCCATT 8mer-m1 dme-miR-263a-5p 3R + 25602857 25602916 3'utr msi FlyBase G34594.1 ATTTATTTATTATTTACGCTTAAGAATCTAACACATTCCAGACATGCTATGGTGCCATTT 19 25602906 0.715734264 6 19 127 1 1.431363764 0 0.315789474 0.518518519 19 0 0 27 3R:25602857-25602916 8 16 2065 FBgn0011666 1019.796667 32.88 50.09666667 0.015689402 0.486618005 0.319382527 2 2 2 0.25 dme-bantam-3p 6mer2-7 GATCTC 3R 25602961 25602966 + 3R_25602961_25602966_+ 0.849240665 0.941145664 0.895193164 0.064986649 msi FBtr0333664 25600746 25608423 3R + 25602943 25603021 3'utr msi FlyBase G45876.1 TTTTTAACTCGTCTGTCAGATCTCGATCTCAGAACAATTGCTTTTAGCATAAGGTTGATTTTACCCTGCCAATCCAAGA 46 25602964 0.780918125 10 41 292 0.903225806 1.748188027 0.016129032 0.282608696 0.467741935 46 6 0 56 3R:25602943-25603021 6 msi FBtr0333664 25600746 25608423 GATCTC 6mer2-7 dme-bantam-3p 3R + 25602947 25602999 3'utr msi FlyBase G34595.1 TAACTCGTCTGTCAGATCTCGATCTCAGAACAATTGCTTTTAGCATAAGGTTG 30 25602964 0.660960243 11 28 194 0.921052632 1.06694679 0.210526316 0.233333333 0.394736842 30 1 2 35 3R:25602947-25602999 6 32 2066 FBgn0011666 1019.796667 32.88 50.09666667 0.031378804 0.97323601 0.638765054 -3 -3 -3 0.25 dme-miR-33-5p 6mer2-7 AATGCA 3R 25653206 25653211 - 3R_25653206_25653211_- 0.765516764 0.678145551 0.721831157 0.061780768 Tnks FBtr0330383|FBtr0084890 25653089|25653089 25653514|25654531 3R - 25653198 25653236 3'utr Tnks FlyBase G54731.1 CGAGGTTACAAGTTCTTTGCCGATGAATGCATTACATTA 9 25653213 0.968433525 5 8 64 0.888888889 0.903089987 0 0 0 9 1 0 8 3R:25653198-25653236 6 Tnks FBtr0330383|FBtr0084890 25653089|25653089 25653514|25654531 AATGCA 6mer2-7 dme-miR-33-5p 3R - 25653198 25653241 3'utr Tnks FlyBase G41316.1 TTATACGAGGTTACAAGTTCTTTGCCGATGAATGCATTACATTA 8 25653205 0.866970566 4 8 62 1 1.146128036 0.071428571 0.375 0.642857143 8 0 0 14 3R:25653198-25653241 6 7 2067 FBgn0027508 387.6333333 8.48 12.93666667 0.018058303 0.825471698 0.541097655 2 -6 -2 0.25 dme-bantam-3p 7mer-m8 TGATCTC 3R 25653482 25653488 - 3R_25653482_25653488_- 0.648275385 0.650581819 0.649428602 0.001630871 Tnks FBtr0330383|FBtr0084890 25653089|25653089 25653514|25654531 3R - 25653430 25653522 stop_codon Tnks FlyBase G54733.1 AGTTGTGACGGTGGTACGACATGCTGGTGGTTATTGATCTCTATGTCTCCGTTGGCCTCCCGTCTATTTTATTACAATTACTAGCTATAGATG 352 25653489 0.713909296 21 327 3618 0.926108374 2.274157849 0.201970443 0.136363636 0.251231527 352 29 1 376 3R:25653430-25653522 7 Tnks FBtr0330383|FBtr0084890 25653089|25653089 25653514|25654531 TGATCTC 7mer-m8 dme-bantam-3p 3R - 25653448 25653518 stop_codon Tnks FlyBase G41319.1 GTGACGGTGGTACGACATGCTGGTGGTTATTGATCTCTATGTCTCCGTTGGCCTCCCGTCTATTTTATTAC 233 25653489 0.663587543 15 213 2298 0.933884298 1.928139707 0.201101928 0.407725322 0.619834711 233 21 3 339 3R:25653448-25653518 7 262.5 2068 FBgn0027508 387.6333333 8.48 12.93666667 0.677186344 30.95518868 20.29116207 1 1 1 0.25 dme-miR-33-5p 6mer3-8 CAATGC 3R 25653600 25653605 - 3R_25653600_25653605_- 0.984875962 0.975032803 0.979954383 0.006960193 Tnks FBtr0084890 25653089 25654531 3R - 25653553 25653675 3'utr Tnks FlyBase G54734.1 GAGCCGGGCACGGGAATGCTCCGTACAGCAGCTCGCTGCAACATCATCGACTAAGACGCTGTTCGTCGTACAATGCGGAGAATGCCTACGAGCACTTTGCGGCCCCCTTCAAGGCGCGCAAGA 12 25653593 0.943599686 8 11 45 1 1.041392685 0.272727273 0 0 11 0 0 11 3R:25653553-25653675 6 Tnks FBtr0084890 25653089 25654531 CAATGC 6mer3-8 dme-miR-33-5p 3R - 25653567 25653623 3'utr Tnks FlyBase G41320.1 AAGACGCTGTTCGTCGTACAATGCGGAGAATGCCTACGAGCACTTTGCGGCCCCCTT 8 25653593 0.950260607 3 6 28 0.818181818 0.954242509 0 0.25 0.454545455 8 2 0 9 3R:25653567-25653623 6 5 2069 FBgn0027508 387.6333333 8.48 12.93666667 0.012898788 0.589622642 0.386498325 -12 -12 -12 0.25 dme-bantam-3p 6mer2-7 GATCTC 3R 25664877 25664882 + 3R_25664877_25664882_+ 0.804635098 0.674595729 0.739615414 0.091951742 RASSF8 FBtr0084898 25664654 25665640 3R + 25664850 25664976 3'utr RASSF8 FlyBase G45891.1 ATGTTTACATTCCAATCACACTCTATGGATCTCTCAATGCAATGATATATGTTACAAATTTGAAATCACAATCGTTTTATTACTCTACATTCCGCACTGTACTTTGTATTTAATAGTAGTTAATGAG 460 25664873 0.731628957 19 451 3253 0.981718464 2.42894429 0.219378428 0.169565217 0.301645338 460 9 1 537 3R:25664850-25664976 6 RASSF8 FBtr0084898 25664654 25665640 GATCTC 6mer2-7 dme-bantam-3p 3R + 25664855 25664912 3'utr RASSF8 FlyBase G34608.1 TACATTCCAATCACACTCTATGGATCTCTCAATGCAATGATATATGTTACAAATTTGA 266 25664873 0.733875348 8 259 1826 0.9825 2.117271296 0.1825 0.383458647 0.59 266 5 2 393 3R:25664855-25664912 6 347 2070 FBgn0261986 768.6366667 27.28 42.04333333 0.451448669 12.71994135 8.25338936 4 4 4 0.25 dme-miR-252-5p 8mer-m1 GTACTTAG 3R 25665245 25665252 + 3R_25665245_25665252_+ 0.631302272 0.633311046 0.632306659 0.001420365 RASSF8 FBtr0084898 25664654 25665640 3R + 25665211 25665295 3'utr RASSF8 FlyBase G45893.1 TAGAATTCACAATTCGAATTACACAAAACTTATTGTACTTAGCAATTAGCGCAGCTTTAAAAAAACAAATTAGCAATGCTTTGTT 13 25665244 0.971758721 7 13 78 1 1.204119983 0.0625 0.153846154 0.3125 13 0 0 16 3R:25665211-25665295 8 RASSF8 FBtr0084898 25664654 25665640 GTACTTAG 8mer-m1 dme-miR-252-5p 3R + 25665233 25665275 3'utr RASSF8 FlyBase G34611.1 ACAAAACTTATTGTACTTAGCAATTAGCGCAGCTTTAAAAAAA 7 25665243 0.761161954 4 7 41 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 3R:25665233-25665275 8 7.5 2071 FBgn0261986 768.6366667 27.28 42.04333333 0.009757536 0.274926686 0.178387378 1 2 1.5 0.25 dme-miR-7-5p 6mer3-8 GTCTTC 3R 25679281 25679286 + 3R_25679281_25679286_+ 0.668919727 0.668760019 0.668839873 0.000112925 CG5039 FBtr0084900 25679239 25679529 3R + 25679224 25679335 stop_codon CG5039 FlyBase G45896.1 ACGCCTCCAATGCCTAGTGAATCTCAAAAGTCTTCCATACACTTTATTGTCCACGTTGTCTTCAAACGGTGGTTGTCATCGGTTTAGTTACTACTGCAAACTACGTGCCTCT 45 25679279 0.983528738 8 42 330 0.962962963 1.414973348 0.203703704 0.2 0.333333333 45 1 1 52 3R:25679224-25679335 6 CG5039 FBtr0084900 25679239 25679529 GTCTTC 6mer3-8 dme-miR-7-5p 3R + 25679223 25679323 stop_codon CG5039 FlyBase G34614.1 AACGCCTCCAATGCCTAGTGAATCTCAAAAGTCTTCCATACACTTTATTGTCCACGTTGTCTTCAAACGGTGGTTGTCATCGGTTTAGTTACTACTGCAAA 31 25679279 0.824513547 7 30 244 0.977272727 1.633468456 0.318181818 0.322580645 0.522727273 31 1 0 43 3R:25679223-25679323 6 18 2072 FBgn0039356 51.46666667 9.296666667 14.23333333 0.349740933 1.936177842 1.264637002 2 2 2 0.25 dme-miR-317-3p 8mer-A1 TGTGTTCA 3R 25683350 25683357 + 3R_25683350_25683357_+ 0.629165703 0.628647366 0.628906534 0.000366493 CG5028 FBtr0113289 25683087 25683780 3R + 25683310 25683381 3'utr CG5028 FlyBase G45907.2 AACCCAAACAAAATATGTTACCCCGGCTAAATGTCCATTGTGTGTTCATTCGATGTCCAAGTGTGATAATTC 12 25683348 0.916947305 9 11 80 0.866666667 1.113943352 0.2 0.166666667 0.333333333 12 2 0 13 3R:25683310-25683381 8 CG5028 FBtr0113289 25683087 25683780 TGTGTTCA 8mer-A1 dme-miR-317-3p 3R + 25683332 25683383 3'utr CG5028 FlyBase G34623.1 CCGGCTAAATGTCCATTGTGTGTTCATTCGATGTCCAAGTGTGATAATTCAG 8 25683348 0.778352957 5 8 69 1 1 0.5 0.25 0.4 8 0 0 10 3R:25683332-25683383 8 6 2073 FBgn0039358 738.9366667 46.93 71.87666667 0.008119776 0.127849989 0.083476325 2 2 2 0.25 dme-miR-276a-3p 6mer2-7 GTTCCT 3R 25698848 25698853 - 3R_25698848_25698853_- 0.942997004 0.934537501 0.938767252 0.00598177 LpR2 FBtr0113387|FBtr0113385|FBtr0113384 25698725|25698725|25698725 25699984|25699984|25699984 3R - 25698791 25698874 3'utr LpR2 FlyBase G54761.1 AATGTGTATTGGCAATTTTTGGTTCCTGTAAAATGTATTTTAATTTAAGCATGAAAAGTATTTGCTTTAATGCTTTTTTGAAAC 55 25698855 0.993485907 10 50 625 0.898305085 1.423245874 0.152542373 0.072727273 0.13559322 55 5 1 53 3R:25698791-25698874 6 LpR2 FBtr0113387|FBtr0113385|FBtr0113384 25698725|25698725|25698725 25699984|25699984|25699984 GTTCCT 6mer2-7 dme-miR-276a-3p 3R - 25698801 25698874 3'utr LpR2 FlyBase G41345.1 AATGTGTATTGGCAATTTTTGGTTCCTGTAAAATGTATTTTAATTTAAGCATGAAAAGTATTTGCTTTAATGCT 47 25698855 0.991830186 7 46 513 0.985294118 1.826074803 0.102941176 0.382978723 0.573529412 47 1 0 67 3R:25698801-25698874 6 48.5 2074 FBgn0051092 94.66666667 3.816666667 5.916666667 0.512323944 12.70742358 8.197183099 2 2 2 0.25 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 25699011 25699017 - 3R_25699011_25699017_- 0.677008249 0.671299481 0.674153865 0.00403666 LpR2 FBtr0113387|FBtr0113385|FBtr0113384 25698725|25698725|25698725 25699984|25699984|25699984 3R - 25698949 25699045 3'utr LpR2 FlyBase G54762.1 TTTCTTTCTTGGGTATTCAAAACAATTTGCTGTGATCAGTTTAAAAGCATTAGACCTGCATTAAATCATCTTATTCGTAGTGATTTTACTATTCTTC 537 25699019 0.773574578 19 522 4419 0.969984202 1.788168371 0.120063191 0.143389199 0.273301738 537 10 9 614 3R:25698949-25699045 7 LpR2 FBtr0113387|FBtr0113385|FBtr0113384 25698725|25698725|25698725 25699984|25699984|25699984 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R - 25698908 25699044 3'utr LpR2 FlyBase G41346.1 TTCTTTCTTGGGTATTCAAAACAATTTGCTGTGATCAGTTTAAAAGCATTAGACCTGCATTAAATCATCTTATTCGTAGTGATTTTACTATTCTTCATTTATTTAGTGTATAAACAAGCTTTCAATCATTTTAACTT 355 25699019 0.764855459 19 343 2872 0.970260223 1.939519253 0.128252788 0.397183099 0.602230483 355 11 5 522 3R:25698908-25699044 7 425 2075 FBgn0051092 94.66666667 3.816666667 5.916666667 4.48943662 111.3537118 71.83098592 2 2 2 0.25 dme-miR-14-3p 8mer-A1 AAGACTGA 3R 25741857 25741864 - 3R_25741857_25741864_- 0.640239287 0.621367182 0.630803235 0.01334459 LpR1 FBtr0301467|FBtr0335236|FBtr0113480|FBtr0301470|FBtr0335235|FBtr0335237|FBtr0301469|FBtr0301466|FBtr0335238|FBtr0301471 25741346|25741346|25741346|25741346|25741346|25741346|25741346|25741346|25741346|25741346 25741979|25741979|25741979|25741979|25741979|25741979|25741979|25741979|25741979|25741979 3R - 25741836 25741878 3'utr LpR1 FlyBase G54784.1 AACACACACGCCTGAAGACTGAGCAACTCTGTGTATTGTGTAA 11 25741866 0.959682383 4 9 53 0.866666667 1.113943352 0.066666667 0.272727273 0.466666667 11 2 0 13 3R:25741836-25741878 8 LpR1 FBtr0335237|FBtr0335235|FBtr0301466|FBtr0301469|FBtr0335238|FBtr0301471|FBtr0301467|FBtr0335236|FBtr0113480|FBtr0301470 25741346|25741346|25741346|25741346|25741346|25741346|25741346|25741346|25741346|25741346 25741979|25741979|25741979|25741979|25741979|25741979|25741979|25741979|25741979|25741979 AAGACTGA 8mer-A1 dme-miR-14-3p 3R - 25741843 25741873 3'utr LpR1 FlyBase G41358.1 ACACGCCTGAAGACTGAGCAACTCTGTGTAT 5 25741866 0.904113456 2 4 19 0.833333333 0.698970004 0 0.2 0.333333333 5 1 0 5 3R:25741843-25741873 8 8 2076 FBgn0066101 6 0.153333333 0.226666667 1.333333333 52.17391304 35.29411765 2 2 2 0.25 dme-miR-2b-2-5p 7mer-A1 TGAAGAA 3R 25887418 25887424 + 3R_25887418_25887424_+ 0.731721738 0.796156909 0.763939324 0.045562567 SppL FBtr0084911|FBtr0344118|FBtr0084909|FBtr0300820|FBtr0300819|FBtr0084910 25887365|25887365|25887365|25887365|25887365|25887365 25888071|25888071|25888230|25888071|25888230|25887564 3R + 25887396 25887461 3'utr SppL FlyBase G45918.1 AAAAAACCAACAGCATACAATGTGAAGAACACACACACATAAGATCTAATACTAACGTTTGTCTCT 12 25887416 0.949648491 6 10 47 0.846153846 1.041392685 0.230769231 0.083333333 0.153846154 12 2 0 11 3R:25887396-25887461 7 SppL FBtr0084909|FBtr0300820|FBtr0300819|FBtr0084910|FBtr0084911|FBtr0344118 25887365|25887365|25887365|25887365|25887365|25887365 25888230|25888071|25888230|25887564|25888071|25888071 TGAAGAA 7mer-A1 dme-miR-2b-2-5p 3R + 25887393 25887479 3'utr SppL FlyBase G34631.1 AACAAAAAACCAACAGCATACAATGTGAAGAACACACACACATAAGATCTAATACTAACGTTTGTCTCTTAAATAACGTATTGAGTA 9 25887416 0.994121909 4 9 45 1 1.230448921 0.352941176 0.555555556 0.764705882 9 0 0 17 3R:25887393-25887479 7 5 2077 FBgn0039381 696.8266667 34.86 53.62333333 0.007175386 0.143430866 0.093242991 2 2 2 0.25 dme-miR-184-3p 7mer-m8 TCCGTCC 3R 25887949 25887955 + 3R_25887949_25887955_+ 0.657008091 0.657552111 0.657280101 0.000384666 SppL FBtr0084911|FBtr0344118|FBtr0084909|FBtr0300820|FBtr0300819 25887365|25887365|25887365|25887365|25887365 25888071|25888071|25888230|25888071|25888230 3R + 25887916 25888043 3'utr SppL FlyBase G45924.1 AATCGAGATCCGTTTCCGTTTCACACGCTCATTTCCGTCCTTCGATTTTTTCGTTTTGTCACCCAATGTTTCCCACACATCTTCACAACCATAATGATGTTTTGCCAAAATGCATGTGTTCGTTGCAA 618 25887948 0.984084791 15 613 5045 0.990691489 2.872156273 0.167553191 0.165048544 0.313829787 618 7 0 745 3R:25887916-25888043 7 SppL FBtr0084909|FBtr0300820|FBtr0300819|FBtr0084911|FBtr0344118 25887365|25887365|25887365|25887365|25887365 25888230|25888071|25888230|25888071|25888071 TCCGTCC 7mer-m8 dme-miR-184-3p 3R + 25887922 25887976 3'utr SppL FlyBase G34634.1 GATCCGTTTCCGTTTCACACGCTCATTTCCGTCCTTCGATTTTTTCGTTTTGTCA 396 25887948 0.725859129 8 386 3013 0.977309562 2.002166062 0.141004862 0.396464646 0.612641815 396 9 5 603 3R:25887922-25887976 7 501 2078 FBgn0039381 696.8266667 34.86 53.62333333 0.718973633 14.37177281 9.342947722 1 1 1 0.25 dme-miR-317-3p 6mer2-7 GTGTTC 3R 25892477 25892482 + 3R_25892477_25892482_+ 0.99956627 0.891180297 0.945373284 0.076640476 Lnk FBtr0339162|FBtr0339161 25892042|25892042 25893270|25893270 3R + 25892456 25892495 3'utr Lnk FlyBase G45936.1 AAGTGATTACCATGAATTTGAGTGTTCGCCTAAAGACAAA 5 25892473 0.972335777 4 5 35 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 3R:25892456-25892495 6 Lnk FBtr0339161|FBtr0339162 25892042|25892042 25893270|25893270 GTGTTC 6mer2-7 dme-miR-317-3p 3R + 25892458 25892490 3'utr Lnk FlyBase G34641.1 GTGATTACCATGAATTTGAGTGTTCGCCTAAAG 5 25892473 0.726289796 3 4 38 0.666666667 0.602059991 0.166666667 0.2 0.333333333 5 2 0 4 3R:25892458-25892490 6 5 2079 FBgn0028717 647.6666667 24.78 37.87333333 0.007720021 0.201775626 0.132019011 4 4 4 0.25 dme-miR-263a-5p 8mer-m1 GTGCCATT 3R 25892861 25892868 + 3R_25892861_25892868_+ 0.467097091 0.50777543 0.48743626 0.028763902 Lnk FBtr0339160|FBtr0339162|FBtr0084937|FBtr0339161|FBtr0084935|FBtr0084936 25892801|25892042|25892801|25892042|25892801|25892801 25893270|25893270|25893270|25893270|25893270|25893270 3R + 25892826 25892871 3'utr Lnk FlyBase G45937.1 GCATTTCGCGGCTTAACCAGCGGAACTTTACTTTTGTGCCATTTTA 9 25892860 0.982325781 4 8 90 0.888888889 0.903089987 0 0 0 9 1 0 8 3R:25892826-25892871 8 Lnk FBtr0084935|FBtr0084936|FBtr0084937|FBtr0339161|FBtr0339160|FBtr0339162 25892801|25892801|25892801|25892042|25892801|25892042 25893270|25893270|25893270|25893270|25893270|25893270 GTGCCATT 8mer-m1 dme-miR-263a-5p 3R + 25892825 25892886 3'utr Lnk FlyBase G34642.1 TGCATTTCGCGGCTTAACCAGCGGAACTTTACTTTTGTGCCATTTTAATCATTGTCCTAAAG 8 25892860 0.993731794 4 5 65 0.8 1.079181246 0.066666667 0.5 0.733333333 8 3 0 12 3R:25892825-25892886 8 7 2080 FBgn0028717 647.6666667 24.78 37.87333333 0.010808029 0.282485876 0.184826615 1 1 1 0.25 dme-miR-317-3p 8mer-A1 TGTGTTCA 3R 25893028 25893035 + 3R_25893028_25893035_+ 0.626947092 0.6300868 0.628516946 0.002220103 Lnk FBtr0339160|FBtr0339162|FBtr0084937|FBtr0339161|FBtr0084935|FBtr0084936 25892801|25892042|25892801|25892042|25892801|25892801 25893270|25893270|25893270|25893270|25893270|25893270 3R + 25892917 25893043 3'utr Lnk FlyBase G45937.3 ATGTGCGTTCTTTGCTTTCTTGATTCACTTGTTTCTATTTTAGTTAGTACCTCTTTTGGAAGACATGAAGTAACTGAACATTATTATGTATACATTATATAGCTAAATGTGTGTGTTCATTTTAAGT 25 25893030 0.770772092 15 24 224 0.964285714 1.431363764 0.142857143 0.12 0.214285714 25 1 0 27 3R:25892917-25893043 8 Lnk FBtr0084935|FBtr0084936|FBtr0084937|FBtr0339161|FBtr0339160|FBtr0339162 25892801|25892801|25892801|25892042|25892801|25892042 25893270|25893270|25893270|25893270|25893270|25893270 TGTGTTCA 8mer-A1 dme-miR-317-3p 3R + 25893009 25893034 3'utr Lnk FlyBase G34644.1 CATTATATAGCTAAATGTGTGTGTTC 9 25893030 0.735286682 2 9 73 1 1.204119983 0.0625 0.444444444 0.6875 9 0 0 16 3R:25893009-25893034 7 9.5 2081 FBgn0028717 647.6666667 24.78 37.87333333 0.014668039 0.383373688 0.25083612 -2 -2 -2 0.25 dme-miR-968-5p 6mer3-8 ACTACT 3R 25894983 25894988 + 3R_25894983_25894988_+ 0.998562006 0.999983976 0.999272991 0.001005506 CG5913 FBtr0084938 25894933 25895026 3R + 25894950 25894991 3'utr CG5913 FlyBase G45945.1 AATGTAGACCATAAACGACTGATCCTCTTGTAAACTACTAAC 54 25894961 0.812882482 8 48 285 0.916666667 1.138302698 0.1 0.111111111 0.2 54 2 3 55 3R:25894950-25894991 6 CG5913 FBtr0084938 25894933 25895026 ACTACT 6mer3-8 dme-miR-968-5p 3R + 25894942 25894992 3'utr CG5913 FlyBase G34651.1 TTCCCAAAAATGTAGACCATAAACGACTGATCCTCTTGTAAACTACTAACA 48 25894961 0.78499005 8 46 285 0.955223881 1.806179974 0.119402985 0.291666667 0.492537313 48 3 0 64 3R:25894942-25894992 6 11.5 2082 FBgn0039385 97.66666667 7.92 12.23 0.11774744 1.452020202 0.940310711 22 22 22 0.25 dme-miR-7-5p 8mer-A1 GTCTTCCA 3R 26022783 26022790 + 3R_26022783_26022790_+ 0.675183817 0.675215145 0.675199481 2.21E-05 E(spl)m3-HLH FBtr0084958 26022693 26023127 3R + 26022749 26022794 3'utr E(spl)m3-HLH FlyBase G45962.1 AATGGCTATTGACCGTTCTGCAACAAGATCCGTTGTCTTCCAAAGT 8 26022782 0.976566965 5 8 54 1 0.954242509 0.333333333 0.125 0.222222222 8 0 0 9 3R:26022749-26022794 8 E(spl)m3-HLH FBtr0084958 26022693 26023127 GTCTTCCA 8mer-A1 dme-miR-7-5p 3R + 26022762 26022796 3'utr E(spl)m3-HLH FlyBase G34665.1 CGTTCTGCAACAAGATCCGTTGTCTTCCAAAGTAA 5 26022783 0.614741982 3 5 34 1 0.84509804 0.571428571 0.2 0.428571429 5 0 0 7 3R:26022762-26022796 8 6 2083 FBgn0002609 41.66666667 4.113333333 6.463333333 0.144 1.458670989 0.928313564 1 0 0.5 0.25 dme-miR-980-3p 7mer-A1 GCAGCTA 3R 26049609 26049615 + 3R_26049609_26049615_+ 0.814094698 0.807963418 0.811029058 0.004335484 gro FBtr0337057|FBtr0305047|FBtr0339900 26048604|26048604|26048604 26049911|26049911|26049911 3R + 26049587 26049625 3'utr gro FlyBase G45976.1 AGTGTAAAATCCTATATTTTGAGCAGCTAAACCCAACAC 15 26049606 0.718880605 4 15 87 1 1.204119983 0 0.066666667 0.125 15 0 0 16 3R:26049587-26049625 7 gro FBtr0337057|FBtr0339900|FBtr0305047 26048604|26048604|26048604 26049911|26049911|26049911 GCAGCTA 7mer-A1 dme-miR-980-3p 3R + 26049593 26049626 3'utr gro FlyBase G34681.1 AAATCCTATATTTTGAGCAGCTAAACCCAACACA 6 26049606 0.944704627 2 6 32 1 0.954242509 0 0.5 0.666666667 6 0 0 9 3R:26049593-26049626 7 10.5 2084 FBgn0001139 2815.8 93.08 143.0433333 0.003728958 0.112806188 0.07340433 3 3 3 0.25 dme-miR-965-3p 7mer-m8 TACGCTT 3R 26054491 26054497 - 3R_26054491_26054497_- 0.620184982 0.620175713 0.620180348 6.58E-06 Dak1 FBtr0084976 26054235 26054574 3R - 26054476 26054616 stop_codon Dak1 FlyBase G54802.1 TTCGGGGAGGTGGAAAAGATATTTGTGGCCAGCGGCTTCTAGATTTCCTGTTCATATTCCGGTTATGTGTGTAGTGCTATCCTTACCTTTCATTTGTACCCTCTAAAAAAATACATATATACGCTTGTTAATAGTAATGCA 57 26054489 0.891698128 20 54 469 0.957142857 1.525044807 0.1 0.210526316 0.357142857 57 2 1 67 3R:26054476-26054616 7 Dak1 FBtr0084976 26054235 26054574 TACGCTT 7mer-m8 dme-miR-965-3p 3R - 26054477 26054552 3'utr Dak1 FlyBase G41368.1 ATGTGTGTAGTGCTATCCTTACCTTTCATTTGTACCCTCTAAAAAAATACATATATACGCTTGTTAATAGTAATGC 38 26054488 0.674912521 14 34 332 0.933333333 1.447158031 0.15 0.394736842 0.616666667 38 3 1 56 3R:26054477-26054552 7 22 2085 FBgn0028833 760.9966667 77.71 118.7166667 0.028909456 0.283103848 0.185315176 -8 -9 -8.5 0.25 dme-miR-965-3p 7mer-m8 TACGCTT 3R 26130354 26130360 + 3R_26130354_26130360_+ 0.594711301 0.578421505 0.586566403 0.011518628 CG31324 FBtr0333925 26129613 26130674 3R + 26130332 26130374 3'utr CG31324 FlyBase G45994.1 AGCATAATCAATGGAACCCTACTACGCTTTTCGCTTTATACAA 89 26130361 0.607114703 5 86 598 0.973684211 1.744292983 0.219298246 0.247191011 0.412280702 89 2 1 111 3R:26130332-26130374 7 CG31324 FBtr0333925 26129613 26130674 TACGCTT 7mer-m8 dme-miR-965-3p 3R + 26130332 26130374 3'utr CG31324 FlyBase G34699.1 AGCATAATCAATGGAACCCTACTACGCTTTTCGCTTTATACAA 72 26130361 0.615389224 4 70 490 0.963302752 2.021189299 0.174311927 0.402777778 0.605504587 72 4 0 105 3R:26130332-26130374 7 79.5 2086 FBgn0051324 1208.083333 49.80333333 76.73666667 0.065806719 1.596278696 1.036010599 -7 -7 -7 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3R 26184875 26184881 + 3R_26184875_26184881_+ 0.443025027 0.443129994 0.44307751 7.42E-05 CG31323 FBtr0084988|FBtr0307339 26184611|26184611 26187307|26184974 3R + 26184854 26184905 3'utr CG31323 FlyBase G45999.1 ATGGAATTCATCAAGCAATTATGTGATTTTTAAGCGAATACTTAACAACTAT 39 26184872 0.990043342 7 39 384 1 1.785329835 0 0.41025641 0.62295082 39 0 0 61 3R:26184854-26184905 7 CG31323 FBtr0307339|FBtr0084988 26184611|26184611 26184974|26187307 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 26184815 26184899 3'utr CG31323 FlyBase G34701.1 ACGCTCGGAAACACACTCTCTCTTACACACAATAACATTATGGAATTCATCAAGCAATTATGTGATTTTTAAGCGAATACTTAAC 31 26184872 0.990095896 11 28 285 0.909090909 1.602059991 0 0.290322581 0.5 31 4 0 40 3R:26184815-26184899 7 31 2087 FBgn0051323 9.51 0.34 0.533333333 3.259726604 91.17647059 58.125 3 3 3 0.25 dme-miR-11-3p 7mer-m1 TGTGATG 3R 26234358 26234364 + 3R_26234358_26234364_+ 0.611554621 0.612023781 0.611789201 0.000331775 CG12290 FBtr0339612 26233100 26234700 3R + 26234341 26234514 3'utr CG12290 FlyBase G46018.1 ATTTCAAAACCAATTATTGTGATGTTGAGCAAGGGGGCAACCAAGAATGTAATTTCGAAATGCATTAAAAATAACTTAAAACATGTATTAATAGTTATAATATATACAAGCTTATGTGTGTATACATACTTTACTAAATAGTGATATTTTTTCAAATTTATTCAACTGTCATTC 71 26234357 0.984499027 18 68 545 0.938271605 1.579783597 0.172839506 0.126760563 0.234567901 71 4 1 76 3R:26234341-26234514 7 CG12290 FBtr0339612 26233100 26234700 TGTGATG 7mer-m1 dme-miR-11-3p 3R + 26234311 26234382 3'utr CG12290 FlyBase G34715.1 ATTCATGCATGTGTGTCGGACAAAGGAAATATTTCAAAACCAATTATTGTGATGTTGAGCAAGGGGGCAACC 25 26234357 0.980170331 8 24 171 0.923076923 1.556302501 0.512820513 0.36 0.58974359 25 3 0 36 3R:26234311-26234382 7 38 2088 FBgn0039419 2058.006667 56.21 86.04666667 0.018464469 0.676036292 0.441620826 1 1 1 0.25 dme-miR-79-3p 7mer-m8 TAGCTTT 3R 26234580 26234586 + 3R_26234580_26234586_+ 0.428783672 0.587850378 0.508317025 0.112477142 CG12290 FBtr0339612 26233100 26234700 3R + 26234550 26234590 3'utr CG12290 FlyBase G46019.1 TAAAACCAAACCAAGTTCAATGTGACAAATTAGCTTTTAAT 12 26234570 0.971173251 3 12 72 1 1.230448921 0.235294118 0.333333333 0.529411765 12 0 0 17 3R:26234550-26234590 7 CG12290 FBtr0339612 26233100 26234700 TAGCTTT 7mer-m8 dme-miR-79-3p 3R + 26234560 26234596 3'utr CG12290 FlyBase G34716.1 CCAAGTTCAATGTGACAAATTAGCTTTTAATCCGAAA 9 26234579 0.760241708 3 8 73 0.909090909 0.698970004 0.181818182 0.222222222 0.363636364 9 0 1 10 3R:26234560-26234596 7 9 2089 FBgn0039419 2058.006667 56.21 86.04666667 0.004373164 0.160113859 0.104594406 10 1 5.5 0.25 dme-miR-184-5p 7mer-m8 TGATAAG 3R 26254725 26254731 - 3R_26254725_26254731_- 0.65899659 0.658918113 0.658957351 5.55E-05 Ald FBtr0084994|FBtr0339614 26254067|26254601 26255341|26255341 3R - 26254692 26254792 3'utr Ald FlyBase G54819.1 GATCCACTATGAAAATCGATGTTTTACCATTATTATTATTATTAAACTTTATATTTATGATTGATAAGTATAAGTGAAACAAATGACGAGAATAAACAAAC 12 26254709 0.992094115 9 10 114 0.769230769 1 0.230769231 0.083333333 0.153846154 12 3 0 10 3R:26254692-26254792 7 Ald FBtr0339614|FBtr0084994 26254601|26254067 26255341|26255341 TGATAAG 7mer-m8 dme-miR-184-5p 3R - 26254692 26254796 3'utr Ald FlyBase G41383.1 AAAAGATCCACTATGAAAATCGATGTTTTACCATTATTATTATTATTAAACTTTATATTTATGATTGATAAGTATAAGTGAAACAAATGACGAGAATAAACAAAC 13 26254761 0.989412884 9 12 114 1 1.301029996 0.05 0.384615385 0.6 13 0 0 20 3R:26254692-26254796 7 3 2090 FBgn0000064 2998.926667 179.2266667 272.1633333 0.001000358 0.016738581 0.011022793 -22 30 4 0.25 dme-miR-282-5p 6mer2-7 GAGGCT 3R 26254847 26254852 - 3R_26254847_26254852_- 0.991977764 0.997536028 0.994756896 0.003930241 Ald FBtr0084994|FBtr0339614 26254067|26254601 26255341|26255341 3R - 26254808 26254881 3'utr Ald FlyBase G54820.1 CAATCACTATCAGCAACACCTAAATGTATGAGGCTTGTAACATTGAAGTCGCACAACGTTTTTTGAATTTTTTT 186 26254853 0.914834612 10 185 1192 0.995495495 2.344392274 0.018018018 0.150537634 0.288288288 186 1 0 221 3R:26254808-26254881 6 Ald FBtr0339614|FBtr0084994 26254601|26254067 26255341|26255341 GAGGCT 6mer2-7 dme-miR-282-5p 3R - 26254826 26254876 3'utr Ald FlyBase G41384.1 ACTATCAGCAACACCTAAATGTATGAGGCTTGTAACATTGAAGTCGCACAA 67 26254853 0.946240926 8 67 408 1 2.012837225 0 0.417910448 0.621359223 67 0 0 103 3R:26254826-26254876 6 125 2091 FBgn0000064 2998.926667 179.2266667 272.1633333 0.041681579 0.697440857 0.459283029 1 1 1 0.25 dme-miR-2a-2-5p 7mer-m8 TGATGAG 3R 26255088 26255094 - 3R_26255088_26255094_- 0.560126967 0.596939642 0.578533304 0.026030439 Ald FBtr0084994|FBtr0339614 26254067|26254601 26255341|26255341 3R - 26255067 26255122 3'utr Ald FlyBase G54822.1 TATAACATTATTTTAGAGAACAACTAAATGATGAGTGCAGAAGAAAGGATTGAATA 25 26255092 0.73773295 5 24 106 1 1.477121255 0 0.16 0.3 25 0 0 30 3R:26255067-26255122 7 Ald FBtr0339614|FBtr0084994 26254601|26254067 26255341|26255341 TGATGAG 7mer-m8 dme-miR-2a-2-5p 3R - 26255053 26255110 3'utr Ald FlyBase G41386.1 TTAGAGAACAACTAAATGATGAGTGCAGAAGAAAGGATTGAATATGTTCGATGGAGAA 15 26255092 0.924426397 7 15 54 1 1.278753601 0.368421053 0.2 0.368421053 15 0 0 19 3R:26255053-26255110 7 17.5 2092 FBgn0000064 2998.926667 179.2266667 272.1633333 0.005835421 0.09764172 0.064299624 -2 -2 -2 0.25 dme-miR-1003-3p 8mer-A1 ATGTGAGA 3R 26453743 26453750 + 3R_26453743_26453750_+ 0.629248459 0.623649518 0.626448988 0.003959091 CG5447 FBtr0085012 26453708 26454585 3R + 26453708 26453821 stop_codon CG5447 FlyBase G46024.1 GACTTCCGCTTTCCCATTCAGCCAACGAGTTTTTCATGTGAGATCGAGCAGCTACAGTCGCATCAACAGGCATGTGAAGGAGAAGAGTCCGTTTCAGCAATTATCAAGCAAAAG 34 26453745 0.970220556 11 32 180 0.945945946 1.544068044 0.216216216 0.088235294 0.162162162 34 2 0 35 3R:26453708-26453821 8 CG5447 FBtr0085012 26453708 26454585 ATGTGAGA 8mer-A1 dme-miR-1003-3p 3R + 26453731 26453772 stop_codon CG5447 FlyBase G34720.1 AACGAGTTTTTCATGTGAGATCGAGCAGCTACAGTCGCATCA 13 26453745 0.711705003 4 12 74 0.952380952 1.301029996 0.19047619 0.461538462 0.666666667 13 1 0 20 3R:26453731-26453772 8 15 2093 FBgn0039427 734.0633333 64.46 98.42666667 0.020434204 0.232702451 0.152397724 -2 -2 -2 0.25 dme-miR-11-3p 7mer-m1 TGTGATG 3R 26469771 26469777 + 3R_26469771_26469777_+ 0.59850481 0.596900302 0.597702556 0.001134553 CG5455 FBtr0085015|FBtr0085016 26469401|26469401 26470008|26470008 3R + 26469603 26469788 3'utr CG5455 FlyBase G46036.1 CATATAATTATATACGCCTATCCATAGCTCAAGTTAGTTATACACATATTATGTTGCCTTTAGTTTAAGCTTAAAACGAGCAGATATATATGCTCAGACATCCCATCTGGTGTCAATGATATTTTGGAATTTTTGTGATCGATTGTGATCATTTTTCAAGCACTTTATTGTGATGATCCCCTAAAT 72 26469769 0.988761666 21 68 622 0.956521739 1.643452676 0.054347826 0.236111111 0.402173913 72 3 1 88 3R:26469603-26469788 7 CG5455 FBtr0085015|FBtr0085016 26469401|26469401 26470008|26470008 TGTGATG 7mer-m1 dme-miR-11-3p 3R + 26469695 26469786 3'utr CG5455 FlyBase G34735.1 CTCAGACATCCCATCTGGTGTCAATGATATTTTGGAATTTTTGTGATCGATTGTGATCATTTTTCAAGCACTTTATTGTGATGATCCCCTAA 47 26469770 0.987461187 15 45 402 0.970588235 1.342422681 0.220588235 0.361702128 0.558823529 47 0 2 66 3R:26469695-26469786 7 36 2094 FBgn0039430 151.6666667 6.406666667 9.843333333 0.237362637 5.619146722 3.657297663 2 1 1.5 0.25 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 3R 26472059 26472066 - 3R_26472059_26472066_- 0.637381193 0.64666597 0.642023581 0.006565345 plum FBtr0302210|FBtr0305049|FBtr0302209|FBtr0344120 26471101|26470076|26471101|26471101 26472978|26472978|26472978|26472978 3R - 26472042 26472123 3'utr plum FlyBase G54845.1 AATTTCCGCATATTTACTGCTGCATTTTGTTTTGTTTACACAACCGATATATCAAATGTACCTGATTATATTCATTTTGCAT 674 26472067 0.985346554 9 664 5491 0.989384289 2.492294658 0.527600849 0.24925816 0.462845011 674 8 2 932 3R:26472042-26472123 8 plum FBtr0302210|FBtr0305049|FBtr0302209|FBtr0344120 26471101|26470076|26471101|26471101 26472978|26472978|26472978|26472978 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R - 26472044 26472092 3'utr plum FlyBase G41400.1 TTGTTTACACAACCGATATATCAAATGTACCTGATTATATTCATTTTGC 448 26472067 0.847330742 8 439 3595 0.98694517 2.878521796 0.54308094 0.407158837 0.654046997 447 10 0 756 3R:26472044-26472092 8 557.5 2095 FBgn0039431 3110.826667 52.34666667 80.39 0.179212814 10.65015283 6.934942157 1 1 1 0.25 dme-miR-986-5p 7mer-A1 TTCGAGA 3R 26594944 26594950 + 3R_26594944_26594950_+ 0.817896885 0.813564019 0.815730452 0.003063823 scrib FBtr0308622|FBtr0308620|FBtr0335522|FBtr0308621|FBtr0308625 26594814|26594814|26594814|26594814|26594814 26595018|26596188|26596188|26596188|26596188 3R + 26594919 26594954 3'utr scrib FlyBase G46052.1 AGTGTTTATTTCGAACGAGACTTTTTTCGAGACTAA 7 26594942 0.730538459 2 6 49 0.875 0.84509804 0.25 0.142857143 0.25 7 1 0 7 3R:26594919-26594954 7 scrib FBtr0308625|FBtr0308621|FBtr0335522|FBtr0308620|FBtr0308622 26594814|26594814|26594814|26594814|26594814 26596188|26596188|26596188|26596188|26595018 TTCGAGA 7mer-A1 dme-miR-986-5p 3R + 26594926 26594959 3'utr scrib FlyBase G34742.1 ATTTCGAACGAGACTTTTTTCGAGACTAAGCTAC 8 26594942 0.975840858 3 7 52 1 0.954242509 0.222222222 0.125 0.222222222 8 0 0 9 3R:26594926-26594959 7 6.5 2096 FBgn0263289 2418.266667 41.02 62.81333333 0.002687876 0.158459288 0.103481214 2 2 2 0.25 dme-miR-263a-5p 8mer-A1 GTGCCATA 3R 26596098 26596105 + 3R_26596098_26596105_+ 0.622781792 0.624224208 0.623503 0.001019931 scrib FBtr0308620|FBtr0335522|FBtr0308621|FBtr0308625 26594814|26594814|26594814|26594814 26596188|26596188|26596188|26596188 3R + 26596043 26596121 3'utr scrib FlyBase G46055.1 CCATTACCATTACTATTATTAATCATCCACATATGTACGTATTTGTCATCGATTTGTGCCATACATATTTTATGTAACT 19 26596096 0.806837107 7 16 178 0.913043478 1.322219295 0 0.210526316 0.347826087 19 2 0 21 3R:26596043-26596121 8 scrib FBtr0308625|FBtr0308621|FBtr0335522|FBtr0308620 26594814|26594814|26594814|26594814 26596188|26596188|26596188|26596188 GTGCCATA 8mer-A1 dme-miR-263a-5p 3R + 26596081 26596122 3'utr scrib FlyBase G34744.1 GTATTTGTCATCGATTTGTGCCATACATATTTTATGTAACTC 20 26596097 0.739332137 6 20 184 1 1.447158031 0 0.3 0.5 20 0 0 28 3R:26596081-26596122 8 17.5 2097 FBgn0263289 2418.266667 41.02 62.81333333 0.007236588 0.42662116 0.278603269 2 1 1.5 0.25 dme-miR-2a-2-5p 7mer-m8 TGATGAG 3R 26715952 26715958 - 3R_26715952_26715958_- 0.571343177 0.562200934 0.566772055 0.006464582 CG6425 FBtr0085047 26715163 26716018 3R - 26715933 26716009 3'utr CG6425 FlyBase G54861.1 AGGTAACCAGCCCCTGAATACAATCAGCTTCCCTTCAGCGAGTACCAATTGTGATGAGCAAAGTTAGAGTTTAAGAT 76 26715961 0.748998765 8 70 433 0.936170213 1.245512668 0.489361702 0.184210526 0.340425532 76 2 4 88 3R:26715933-26716009 7 CG6425 FBtr0085047 26715163 26716018 TGATGAG 7mer-m8 dme-miR-2a-2-5p 3R - 26715883 26716002 3'utr CG6425 FlyBase G41414.1 CAGCCCCTGAATACAATCAGCTTCCCTTCAGCGAGTACCAATTGTGATGAGCAAAGTTAGAGTTTAAGATATTTCGTTTTGTTTCGCTTGACTTGCGTGCCCCCTTGCCTGAGCATTCTG 77 26715961 0.764524821 13 72 454 0.933333333 1.204119983 0.425 0.402597403 0.616666667 77 2 6 112 3R:26715883-26716002 7 61.5 2098 FBgn0039449 117.6666667 6.803333333 10.38 0.52266289 9.039686428 5.924855491 3 3 3 0.25 dme-miR-980-3p 6mer3-8 GGCAGC 3R 26784976 26784981 + 3R_26784976_26784981_+ 0.924248317 0.925576609 0.924912463 0.00093925 CG42790 FBtr0310469 26784837 26785753 3R + 26784960 26784994 3'utr CG42790 FlyBase G46066.1 ACACACCCATCTATTTGGCAGCCAGACTTTGATTC 15 26784974 0.723764838 3 14 78 0.941176471 1.204119983 0 0.133333333 0.235294118 15 1 0 16 3R:26784960-26784994 6 CG42790 FBtr0310469 26784837 26785753 GGCAGC 6mer3-8 dme-miR-980-3p 3R + 26784961 26784988 3'utr CG42790 FlyBase G34754.1 CACACCCATCTATTTGGCAGCCAGACTT 6 26784974 0.945017399 2 6 28 1 1 0 0.5 0.7 6 0 0 10 3R:26784961-26784988 6 10.5 2099 FBgn0261861 0.333333333 0.033333333 0.05 31.5 315 210 2 2 2 0.25 dme-miR-252-5p 7mer-m8 GTACTTA 3R 26842575 26842581 - 3R_26842575_26842581_- 0.350702157 0.358360394 0.354531276 0.005415165 Lerp FBtr0334310|FBtr0085099|FBtr0300939|FBtr0085097 26842460|26842460|26842460|26842460 26843181|26843181|26843181|26843181 3R - 26842554 26842706 3'utr Lerp FlyBase G54881.1 ATAACCAGTATAGCGCAGCAGCTTTTTCCTTCCATAAAAGATGTGATTTCATTTTTAAAACTTTCAAGTGCAGCTTGTTAGTGGTATTCCTTTGAAACGATTTGTATTTTACTCTAAGGCAATCTGTACTTACATTTATGTTTGTGTCTTGAG 126 26842582 0.978177495 19 122 1114 0.962962963 2.193124598 0.080246914 0.246031746 0.413580247 126 6 0 156 3R:26842554-26842706 7 Lerp FBtr0334310|FBtr0085099|FBtr0300939|FBtr0085097 26842460|26842460|26842460|26842460 26843181|26843181|26843181|26843181 GTACTTA 7mer-m8 dme-miR-252-5p 3R - 26842533 26842705 3'utr Lerp FlyBase G41428.1 TAACCAGTATAGCGCAGCAGCTTTTTCCTTCCATAAAAGATGTGATTTCATTTTTAAAACTTTCAAGTGCAGCTTGTTAGTGGTATTCCTTTGAAACGATTTGTATTTTACTCTAAGGCAATCTGTACTTACATTTATGTTTGTGTCTTGAGTTGTTTTTAGTTCAATAAGGC 80 26842582 0.987529309 15 78 706 0.982300885 2.045322979 0.03539823 0.3 0.504424779 80 2 0 111 3R:26842533-26842705 7 39 2100 FBgn0051072 373.47 12.92333333 19.75 0.104426058 3.017797266 1.974683544 1 1 1 0.25 dme-miR-1007-3p 6mer3-8 TGAGCT 3R 26842997 26843002 - 3R_26842997_26843002_- 0.836589905 0.912478534 0.874534219 0.053661344 Lerp FBtr0334310|FBtr0085099|FBtr0300939|FBtr0085097 26842460|26842460|26842460|26842460 26843181|26843181|26843181|26843181 3R - 26842961 26843033 3'utr Lerp FlyBase G54884.1 AGAAGACATTACTGAAAACTGGAACTGATTGTGAGCTAAACAAACCAATTGAAAACTAAAGAAAACCGTAGTA 39 26843005 0.962489045 8 37 187 0.94 1.371067862 0.12 0.256410256 0.42 39 2 1 47 3R:26842961-26843033 6 Lerp FBtr0334310|FBtr0085099|FBtr0300939|FBtr0085097 26842460|26842460|26842460|26842460 26843181|26843181|26843181|26843181 TGAGCT 6mer3-8 dme-miR-1007-3p 3R - 26842959 26843023 3'utr Lerp FlyBase G41431.1 ACTGAAAACTGGAACTGATTGTGAGCTAAACAAACCAATTGAAAACTAAAGAAAACCGTAGTAGA 33 26843005 0.958388219 8 30 156 0.9375 1.176091259 0.083333333 0.303030303 0.520833333 33 1 2 45 3R:26842959-26843023 6 27.5 2101 FBgn0051072 373.47 12.92333333 19.75 0.073633759 2.12793397 1.392405063 3 3 3 0.25 dme-miR-14-3p 7mer-A1 AGACTGA 3R 26869202 26869208 + 3R_26869202_26869208_+ 0.81225161 0.82292164 0.817586625 0.007544829 His2Av FBtr0334311 26868585 26869220 3R + 26869164 26869223 3'utr His2Av FlyBase G46096.1 CACAACTGTAGCTTTTCATCCGAAAGATAATAATGAATAGACTGACCTGACGTTTTTCAA 20 26869200 0.958613419 6 19 95 0.96875 1.491361694 0.46875 0.4 0.625 20 1 0 31 3R:26869164-26869223 7 His2Av FBtr0334311 26868585 26869220 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 26869170 26869216 3'utr His2Av FlyBase G34775.1 TGTAGCTTTTCATCCGAAAGATAATAATGAATAGACTGACCTGACGT 10 26869201 0.704427486 7 9 51 0.882352941 1.176091259 0.294117647 0.6 0.764705882 10 2 0 15 3R:26869170-26869216 7 12.5 2102 FBgn0001197 5513.57 740.2033333 1128.183333 0.002267134 0.016887252 0.011079759 2 1 1.5 0.25 dme-bantam-3p 7mer-A1 GATCTCA 3R 26872393 26872399 - 3R_26872393_26872399_- 0.572493662 0.823019973 0.697756817 0.177148846 Rb97D FBtr0085093 26872127 26873864 3R - 26872373 26872420 3'utr Rb97D FlyBase G54913.1 TCGTAAGGTAAGTTAGTAACGGATCTCATCTAGGATAAACTAGAGTTT 35 26872391 0.690347602 6 32 251 0.923076923 1.255272505 0.128205128 0.114285714 0.205128205 35 2 1 36 3R:26872373-26872420 7 Rb97D FBtr0085093 26872127 26873864 GATCTCA 7mer-A1 dme-bantam-3p 3R - 26872371 26872420 3'utr Rb97D FlyBase G41456.1 TCGTAAGGTAAGTTAGTAACGGATCTCATCTAGGATAAACTAGAGTTTTT 23 26872391 0.697244343 8 23 161 1 1.531478917 0.117647059 0.47826087 0.647058824 23 0 0 34 3R:26872371-26872420 7 28.5 2103 FBgn0004903 1478.54 66.86666667 102.46 0.019275772 0.426221336 0.27815733 -8 -8 -8 0.25 dme-miR-932-5p 7mer-A1 GAATTGA 3R 26872736 26872742 - 3R_26872736_26872742_- 0.799218539 0.812303368 0.805760953 0.009252422 Rb97D FBtr0100336|FBtr0100334|FBtr0085092|FBtr0085093|FBtr0100335|FBtr0100340|FBtr0100338|FBtr0100337 26872581|26872581|26872581|26872127|26872581|26872581|26872581|26872581 26873961|26873864|26873864|26873864|26873961|26873864|26873864|26873864 3R - 26872717 26872813 3'utr Rb97D FlyBase G54915.1 GGATTAACTAGACTTACGATTTATTCTCGACTCTCTCCTATTATTAAGCTGTTGTGCACGCCAAGGGCTTTGAATTGATCTTTATATATAATGCAGT 25 26872739 0.901085019 9 22 230 0.857142857 1.380211242 0.392857143 0.12 0.214285714 25 4 0 24 3R:26872717-26872813 7 Rb97D FBtr0100337|FBtr0100338|FBtr0100340|FBtr0100335|FBtr0085093|FBtr0085092|FBtr0100334|FBtr0100336 26872581|26872581|26872581|26872581|26872127|26872581|26872581|26872581 26873864|26873864|26873864|26873961|26873864|26873864|26873864|26873961 GAATTGA 7mer-A1 dme-miR-932-5p 3R - 26872712 26872768 3'utr Rb97D FlyBase G41457.1 AAGCTGTTGTGCACGCCAAGGGCTTTGAATTGATCTTTATATATAATGCAGTACTGA 27 26872739 0.767320575 8 23 247 0.789473684 1.176091259 0.263157895 0.259259259 0.473684211 27 7 1 30 3R:26872712-26872768 7 19.5 2104 FBgn0004903 1478.54 66.86666667 102.46 0.013188686 0.291625125 0.190318173 -3 -3 -3 0.25 dme-miR-8-3p 7mer-A1 AGTATTA 3R 26910508 26910514 + 3R_26910508_26910514_+ 0.390057685 0.816074523 0.603066104 0.301239368 T48 FBtr0085065|FBtr0336724 26910466|26910466 26910991|26910997 3R + 26910474 26910534 3'utr T48 FlyBase G46101.1 CACAAAACTCATACTCAAAACTTAATGCAAACTAAGTATTACCCCGGCTGGCGGCGCTAGC 28 26910495 0.814627126 7 18 128 0.677419355 1.322219295 0.322580645 0.107142857 0.193548387 28 10 0 21 3R:26910474-26910534 7 T48 FBtr0085065|FBtr0336724 26910466|26910466 26910991|26910997 AGTATTA 7mer-A1 dme-miR-8-3p 3R + 26910451 26910534 stop_codon T48 FlyBase G34781.1 TCACCACGGAGCTGTAACCGCATCACAAAACTCATACTCAAAACTTAATGCAAACTAAGTATTACCCCGGCTGGCGGCGCTAGC 14 26910506 0.979651494 6 9 61 0.684210526 1.113943352 0.421052632 0.285714286 0.473684211 14 6 0 13 3R:26910451-26910534 7 14.5 2105 FBgn0004359 35.32333333 1.686666667 2.493333333 0.410493536 8.596837945 5.815508021 13 2 7.5 0.25 dme-miR-8-3p 6mer3-8 CAGTAT 3R 26950357 26950362 - 3R_26950357_26950362_- 0.956808743 0.999023205 0.977915974 0.029850159 CG6330 FBtr0085085|FBtr0085084 26950121|26949690 26950424|26950424 3R - 26950270 26950379 3'utr CG6330 FlyBase G54933.1 ATATGTGCGCATCTCTCCAGTATACAATGATGTTTCAACATTCCCTAGTTTAGCTCTGATTAAGTTCCTAGCTTTATTTCTGTGTATATCGCCCACAACCTCATCGGATA 19 26950352 0.78842745 9 17 135 0.961538462 1.397940009 0.153846154 0.315789474 0.5 19 1 0 25 3R:26950270-26950379 6 CG6330 FBtr0085085|FBtr0085084 26950121|26949690 26950424|26950424 CAGTAT 6mer3-8 dme-miR-8-3p 3R - 26950270 26950384 3'utr CG6330 FlyBase G41474.1 ACATTATATGTGCGCATCTCTCCAGTATACAATGATGTTTCAACATTCCCTAGTTTAGCTCTGATTAAGTTCCTAGCTTTATTTCTGTGTATATCGCCCACAACCTCATCGGATA 16 26950364 0.98081386 10 15 109 0.933333333 1.447158031 0.166666667 0.625 0.8 16 2 0 28 3R:26950270-26950384 6 9 2106 FBgn0039464 58.00333333 3.87 5.813333333 0.155163496 2.325581395 1.548165138 -10 2 -4 0.25 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 26961441 26961447 - 3R_26961441_26961447_- 0.655318155 0.61199076 0.633654457 0.030637098 Tsp97E FBtr0344665|FBtr0336726|FBtr0344664|FBtr0273310 26961062|26961399|26961399|26961062 26962355|26962355|26963005|26963005 3R - 26961412 26961473 3'utr Tsp97E FlyBase G54943.1 ATTAGATAATATTCTCTGTATTCTGTGCTGTGATTGAAGTAAATATGATCTTTAAAACAACA 80 26961450 0.8333937 7 78 767 0.979591837 1.982271233 0.091836735 0.175 0.326530612 80 2 0 96 3R:26961412-26961473 7 Tsp97E FBtr0344664|FBtr0273310|FBtr0336726|FBtr0344665 26961399|26961062|26961399|26961062 26963005|26963005|26962355|26962355 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R - 26961416 26961475 3'utr Tsp97E FlyBase G41480.1 CCATTAGATAATATTCTCTGTATTCTGTGCTGTGATTGAAGTAAATATGATCTTTAAAAC 77 26961450 0.704298682 10 75 741 0.982142857 1.740362689 0.125 0.337662338 0.544642857 77 1 1 110 3R:26961416-26961475 7 72.5 2107 FBgn0039465 1547.256667 107.7333333 165.9533333 0.046857126 0.672957921 0.436869803 3 3 3 0.25 dme-miR-304-5p 8mer-A1 TGAGATTA 3R 26962097 26962104 - 3R_26962097_26962104_- 0.566593214 0.564470635 0.565531925 0.001500905 Tsp97E FBtr0344665|FBtr0085082|FBtr0336726|FBtr0344664|FBtr0273310 26961062|26961723|26961399|26961399|26961062 26962355|26962355|26962355|26963005|26963005 3R - 26962078 26962130 3'utr Tsp97E FlyBase G54947.1 ATGTTATTTAATTACAAAACCTCCATTGAGATTATGTTTAGATGTAATAATGT 59 26962105 0.932759732 5 57 562 0.985294118 1.826074803 0.029411765 0.13559322 0.25 59 1 0 67 3R:26962078-26962130 8 Tsp97E FBtr0344664|FBtr0273310|FBtr0085082|FBtr0336726|FBtr0344665 26961399|26961062|26961723|26961399|26961062 26963005|26963005|26962355|26962355|26962355 TGAGATTA 8mer-A1 dme-miR-304-5p 3R - 26962014 26962121 3'utr Tsp97E FlyBase G41483.1 AATTACAAAACCTCCATTGAGATTATGTTTAGATGTAATAATGTAATCTAAGTTTAACCGTTTAAAAGTCCTTAGTTAGCTCTTAATGCCTTTCTTTGCAACTCGCAA 45 26962105 0.834999223 12 45 406 1 1.886490725 0.077922078 0.488888889 0.701298701 45 0 0 77 3R:26962014-26962121 8 47.5 2108 FBgn0039465 1547.256667 107.7333333 165.9533333 0.030699496 0.440903465 0.286225043 1 1 1 0.25 dme-miR-965-3p 7mer-m8 TACGCTT 3R 26977159 26977165 + 3R_26977159_26977165_+ 0.595940837 0.615336567 0.605638702 0.013714902 CG5521 FBtr0301134|FBtr0085069 26976544|26976544 26977878|26977878 3R + 26977135 26977180 3'utr CG5521 FlyBase G46133.1 TTTCTTTCCTTTTATGTCACATTTTACGCTTGGCCACAAGACGCAA 32 26977158 0.975931853 2 32 236 1 1.579783597 0.026315789 0.1875 0.315789474 32 0 0 38 3R:26977135-26977180 7 CG5521 FBtr0301134|FBtr0085069 26976544|26976544 26977878|26977878 TACGCTT 7mer-m8 dme-miR-965-3p 3R + 26977146 26977183 3'utr CG5521 FlyBase G34797.1 TTATGTCACATTTTACGCTTGGCCACAAGACGCAAATT 25 26977158 0.975116231 5 25 161 1 1.612783857 0.12195122 0.4 0.634146341 25 0 0 41 3R:26977146-26977183 7 28.5 2109 FBgn0039466 1133.8 17.58666667 26.86 0.025136708 1.620545868 1.061057334 1 1 1 0.25 dme-miR-8-3p 7mer-A1 AGTATTA 3R 26977290 26977296 + 3R_26977290_26977296_+ 0.594823736 0.670003996 0.632413866 0.0531605 CG5521 FBtr0301134|FBtr0085069 26976544|26976544 26977878|26977878 3R + 26977246 26977325 3'utr CG5521 FlyBase G46134.1 CATAGAAACTTGCTCTGCCCATTCAAAGCAAAACATCAACTACTAGTATTATGTAATCGAGCTATATGTATAGGTATAGG 13 26977267 0.970643767 7 13 77 1 1.204119983 0.1875 0.153846154 0.3125 13 0 0 16 3R:26977246-26977325 7 CG5521 FBtr0301134|FBtr0085069 26976544|26976544 26977878|26977878 AGTATTA 7mer-A1 dme-miR-8-3p 3R + 26977241 26977320 3'utr CG5521 FlyBase G34798.1 TCGAACATAGAAACTTGCTCTGCCCATTCAAAGCAAAACATCAACTACTAGTATTATGTAATCGAGCTATATGTATAGGT 11 26977281 0.977281985 7 10 71 0.944444444 1.230448921 0.166666667 0.363636364 0.611111111 11 1 0 17 3R:26977241-26977320 7 5.5 2110 FBgn0039466 1133.8 17.58666667 26.86 0.004850944 0.312736922 0.20476545 23 9 16 0.25 dme-miR-1003-3p 6mer2-7 TGTGAG 3R 26977395 26977400 + 3R_26977395_26977400_+ 0.999999692 0.506418771 0.753209232 0.349014401 CG5521 FBtr0301134|FBtr0085069 26976544|26976544 26977878|26977878 3R + 26977353 26977416 3'utr CG5521 FlyBase G46135.1 TCCAAAACCCTATCAACTGTCGATGGCAATCGTCACTAGGAGTGTGAGTCTTAGAAAGGAAAAC 13 26977397 0.938369143 8 12 71 0.923076923 1.079181246 0.230769231 0 0 13 1 0 12 3R:26977353-26977416 6 CG5521 FBtr0301134|FBtr0085069 26976544|26976544 26977878|26977878 TGTGAG 6mer2-7 dme-miR-1003-3p 3R + 26977373 26977408 3'utr CG5521 FlyBase G34799.1 CGATGGCAATCGTCACTAGGAGTGTGAGTCTTAGAA 10 26977397 0.752140934 6 9 55 0.857142857 1.079181246 0.285714286 0.4 0.571428571 10 2 0 12 3R:26977373-26977408 6 7.5 2111 FBgn0039466 1133.8 17.58666667 26.86 0.006614923 0.426459439 0.279225614 -2 -2 -2 0.25 dme-miR-1007-3p 7mer-m8 TGAGCTT 3R 26985554 26985560 + 3R_26985554_26985560_+ 0.620174236 0.611504748 0.615839492 0.006130262 CG14253 FBtr0085072|FBtr0085073|FBtr0085071|FBtr0085070|FBtr0085074|FBtr0331701 26985256|26985256|26985256|26985256|26985256|26985256 26985706|26985706|26985706|26985706|26985706|26985706 3R + 26985519 26985605 3'utr CG14253 FlyBase G46144.1 TATTGTTGCATACTCTTGGGCTTATAAGTTCAATCTGAGCTTGAAATATGCCTGGTTAGGCCACATTGTCCAGTCGATTCCTTTGAC 17 26985535 0.985374742 10 16 148 0.913043478 1.322219295 0.173913043 0.294117647 0.47826087 17 2 0 21 3R:26985519-26985605 7 CG14253 FBtr0085070|FBtr0085071|FBtr0085073|FBtr0085072|FBtr0331701|FBtr0085074 26985256|26985256|26985256|26985256|26985256|26985256 26985706|26985706|26985706|26985706|26985706|26985706 TGAGCTT 7mer-m8 dme-miR-1007-3p 3R + 26985507 26985586 3'utr CG14253 FlyBase G34806.1 CTACAATACCATTATTGTTGCATACTCTTGGGCTTATAAGTTCAATCTGAGCTTGAAATATGCCTGGTTAGGCCACATTG 16 26985534 0.941184812 9 15 145 0.954545455 1.322219295 0.136363636 0.3125 0.5 16 1 0 21 3R:26985507-26985586 7 5.5 2112 FBgn0039467 5123.18 287.6366667 442.6666667 0.001073552 0.019121345 0.012424699 19 20 19.5 0.25 dme-miR-980-5p 6mer3-8 GAAAAA 3R 27065047 27065052 - 3R_27065047_27065052_- 0.994774782 0.670627679 0.832701231 0.229206613 spz FBtr0114372|FBtr0112834 27064988|27064988 27065853|27065853 3R - 27064990 27065075 3'utr spz FlyBase G54968.1 AAGAAAGATAGAAATAACGATTTGAAAAATGTATGTTAAAAAAAGATAATGTATAATAAATGTATGCAAGTACATGCCAGCAAAGT 20 27065054 0.896865833 13 19 121 0.96 1.380211242 0.08 0.25 0.4 20 1 0 24 3R:27064990-27065075 6 spz FBtr0114372|FBtr0112834 27064988|27064988 27065853|27065853 GAAAAA 6mer3-8 dme-miR-980-5p 3R - 27064992 27065074 3'utr spz FlyBase G41496.1 AGAAAGATAGAAATAACGATTTGAAAAATGTATGTTAAAAAAAGATAATGTATAATAAATGTATGCAAGTACATGCCAGCAAA 13 27065027 0.956480641 8 11 67 0.8125 1.113943352 0 0.230769231 0.375 13 3 0 13 3R:27064992-27065074 6 7 2113 FBgn0003495 2700.523333 165.5533333 254.8866667 0.00259209 0.042282447 0.027463186 2 -25 -11.5 0.25 dme-miR-283-5p 7mer-m8 TGATATT 3R 27065806 27065812 - 3R_27065806_27065812_- 0.568304086 0.563199863 0.565751974 0.003609214 spz FBtr0114372|FBtr0112834 27064988|27064988 27065853|27065853 3R - 27065780 27065931 stop_codon spz FlyBase G54971.1 AGTGATGGCGAACTGGACGTGGTGCAGAATTCCTTCAAGATCCCTTCCTGCTGCAAGTGCGCGTTGAAGACTGGGTGATTCTGGAAAATGGGATTCTCCAGTCGATGGCTGCGACAATGTGATATTGAGGTGAGGCCACGATTTATTCGTAC 643 27065826 0.976300899 25 616 3948 0.950904393 1.662757832 0.288113695 0.161741835 0.303617571 643 23 15 736 3R:27065780-27065931 7 spz FBtr0114372|FBtr0085137|FBtr0085138|FBtr0085145|FBtr0085140|FBtr0085146|FBtr0112834|FBtr0085139 27064988|27065086|27065086|27065086|27065086|27065086|27064988|27065086 27065853|27065853|27065853|27065853|27065853|27065853|27065853|27065853 TGATATT 7mer-m8 dme-miR-283-5p 3R - 27065792 27065883 stop_codon spz FlyBase G41500.1 TGCTGCAAGTGCGCGTTGAAGACTGGGTGATTCTGGAAAATGGGATTCTCCAGTCGATGGCTGCGACAATGTGATATTGAGGTGAGGCCACG 458 27065826 0.851919049 19 428 2742 0.949567723 1.915795428 0.282420749 0.366812227 0.582132565 458 28 7 659 3R:27065792-27065883 7 325 2114 FBgn0003495 2700.523333 165.5533333 254.8866667 0.120347044 1.963113599 1.275076505 14 14 14 0.25 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 27114831 27114836 + 3R_27114831_27114836_+ 0.62601134 0.617004636 0.621507988 0.006368699 CG5815 FBtr0339262|FBtr0085106 27114631|27114631 27115126|27115126 3R + 27114809 27114850 3'utr CG5815 FlyBase G46153.1 GTGCACAGGAAGAAGCGAATTCTGATGAAGATTGGTTTGCTG 7 27114840 0.97487744 4 7 44 1 0.954242509 0.444444444 0.285714286 0.444444444 7 0 0 9 3R:27114809-27114850 6 CG5815 FBtr0339262|FBtr0085106 27114631|27114631 27115126|27115126 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R + 27114798 27114850 3'utr CG5815 FlyBase G34811.1 AAACCAGAGAAGTGCACAGGAAGAAGCGAATTCTGATGAAGATTGGTTTGCTG 7 27114840 0.949350225 4 7 36 1 1.041392685 0.545454545 0.285714286 0.545454545 7 0 0 11 3R:27114798-27114850 6 6.5 2115 FBgn0027574 396.19 21.08 32.38333333 0.01640627 0.308349146 0.200720535 -9 -9 -9 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3R 27125025 27125031 - 3R_27125025_27125031_- 0.521223511 0.521216531 0.521220021 4.95E-06 CG6051 FBtr0305050|FBtr0339264 27124757|27124757 27125642|27125642 3R - 27125004 27125049 3'utr CG6051 FlyBase G55035.1 TTTTTGCGAAACATTTTTTGTGATTTATCGTAATTTTATATGTATT 71 27125025 0.635087439 10 69 829 0.978723404 1.662757832 0.361702128 0.267605634 0.446808511 71 1 1 92 3R:27125004-27125049 7 CG6051 FBtr0339264|FBtr0305050 27124757|27124757 27125642|27125642 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 27124989 27125094 3'utr CG6051 FlyBase G41560.1 ATTGCGCGATCAAGCTGATTTAGTAGGCGTTAACTGTAGCAGAAATTTTTGCGAAACATTTTTTGTGATTTATCGTAATTTTATATGTATTAATTCGCTTATGTTA 47 27125025 0.992890002 11 45 519 0.970588235 1.51851394 0.308823529 0.319148936 0.529411765 47 1 1 66 3R:27124989-27125094 7 55.5 2116 FBgn0039492 806.82 24.12 36.87 0.068788577 2.300995025 1.505288853 -6 -6 -6 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 27156744 27156750 + 3R_27156744_27156750_+ 0.798580557 0.800701951 0.799641254 0.001500056 Men-b FBtr0085110|FBtr0085110|FBtr0085110 27156373|27156373|27156373 27157603|27157603|27157603 3R + 27156721 27156769 3'utr Men-b FlyBase G46176.1 AAAAATTATCATGTTATTAATTTTGTGATACCGAAACGTACGATACTAA 27 27156742 0.8680529 5 24 244 0.909090909 0.875061263 0.181818182 0.148148148 0.303030303 27 0 3 30 3R:27156721-27156769 7 Men-b FBtr0085110|FBtr0085110|FBtr0085110 27156373|27156373|27156373 27157603|27157603|27157603 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 27156709 27156846 3'utr Men-b FlyBase G34826.1 TTTTATATATGTAAAAATTATCATGTTATTAATTTTGTGATACCGAAACGTACGATACTAAATGACGACATTGACATGACGACTGTGACGGTGACTACGCCTTCGAAAAAGCAATTACGCAGTATTCTATTCTATCCT 29 27156742 0.987137413 15 26 228 0.875 0.942008053 0.075 0.310344828 0.5 29 2 3 35 3R:27156709-27156846 7 20.5 2117 FBgn0029155 3172.966667 116.5433333 178.2166667 0.006460831 0.175900237 0.115028523 2 2 2 0.25 dme-miR-980-3p 6mer2-7 GCAGCT 3R 27157450 27157455 + 3R_27157450_27157455_+ 0.972163875 0.989530948 0.980847411 0.012280323 Men-b FBtr0301708|FBtr0085110 27157162|27156373 27157603|27157603 3R + 27157436 27157474 3'utr Men-b FlyBase G46179.1 ATTAACGCAATTAAGCAGCTTTGTTATAATTTATTGTTA 10 27157457 0.619581124 5 9 80 0.933333333 0.84509804 0 0.5 0.666666667 10 0 1 14 3R:27157436-27157474 6 Men-b FBtr0085110|FBtr0301708 27156373|27157162 27157603|27157603 GCAGCT 6mer2-7 dme-miR-980-3p 3R + 27157434 27157478 3'utr Men-b FlyBase G34827.1 TTATTAACGCAATTAAGCAGCTTTGTTATAATTTATTGTTAAAAG 6 27157456 0.976406744 5 5 41 1 0.84509804 0.428571429 0.4 0.571428571 5 0 0 7 3R:27157434-27157478 6 7 2118 FBgn0029155 3172.966667 116.5433333 178.2166667 0.002206137 0.060063496 0.039278032 -7 -6 -6.5 0.25 dme-miR-283-5p 8mer-m1 TGATATTT 3R 27172513 27172520 - 3R_27172513_27172520_- 0.449616334 0.457978047 0.453797191 0.005912615 Ser FBtr0085128|FBtr0344121 27172088|27172088 27172990|27172990 3R - 27172485 27172581 3'utr Ser FlyBase G55057.1 ATTTAAGTTAGATAGTGTAATTCCGAACTCTTCTCTTCGCTAAGCAACATCCTACACAGTGTGATATTTAGTGTAACCCAGGCGCGCATTTACATTC 93 27172514 0.668737143 14 88 691 0.954954955 2.025305865 0.063063063 0.161290323 0.297297297 93 5 0 106 3R:27172485-27172581 8 Ser FBtr0085128|FBtr0344121 27172088|27172088 27172990|27172990 TGATATTT 8mer-m1 dme-miR-283-5p 3R - 27172483 27172612 3'utr Ser FlyBase G41572.1 GCAGTGCCATGTCGATGTGGAAGCCCAAAATATTTAAGTTAGATAGTGTAATTCCGAACTCTTCTCTTCGCTAAGCAACATCCTACACAGTGTGATATTTAGTGTAACCCAGGCGCGCATTTACATTCAT 84 27172514 0.985359712 16 78 630 0.95620438 1.8162413 0.072992701 0.404761905 0.635036496 84 5 1 131 3R:27172483-27172612 8 65.5 2119 FBgn0004197 511.3333333 10.63 16.37666667 0.12809648 6.161806209 3.999592917 -6 -6 -6 0.25 dme-miR-970-3p 7mer-A1 CTTATGA 3R 27227490 27227496 - 3R_27227490_27227496_- 0.810207313 0.703395417 0.756801365 0.075527419 CG42813 FBtr0303825|FBtr0347068 27227438|27227068 27227706|27227706 3R - 27227450 27227577 3'utr CG42813 FlyBase G55075.1 ATGCTTTCCAACCGAGCGCATTGTGAGTGCGCCTAGCGCACACGATATAATACTGAAATTCCCGTGCCTGTCGAGGCTTACCTTATGATATGTATACCGTGTAATATGTAATAAACCCTGGCCAGCTG 18 27227499 0.977203213 9 18 120 1 1.301029996 0.05 0.111111111 0.2 18 0 0 20 3R:27227450-27227577 7 CG42813 FBtr0347068|FBtr0303825 27227068|27227438 27227706|27227706 CTTATGA 7mer-A1 dme-miR-970-3p 3R - 27227489 27227516 3'utr CG42813 FlyBase G41582.1 CCGTGCCTGTCGAGGCTTACCTTATGAT 6 27227499 0.656531759 3 5 41 0.888888889 0.903089987 0.111111111 0.5 0.666666667 6 1 0 8 3R:27227489-27227516 7 7 2120 FBgn0261995 209.3266667 26.48666667 40.32666667 0.033440555 0.264283916 0.17358241 3 3 3 0.25 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 27242373 27242378 - 3R_27242373_27242378_- 0.969865591 0.991268722 0.980567157 0.015134277 CG18766 FBtr0333327|FBtr0085122|FBtr0085123 27242333|27242333|27242333 27242709|27242709|27242709 3R - 27242365 27242489 3'utr CG18766 FlyBase G55085.1 CGATCGCGCCCTCGATACAGAGTTGACTTCCGTAAAGAGGGGGCTGGATCGATCAATCGTGCATAGAGATCCTAGGGAGTACATTACATTTAGACACCATTTCCTACTGTTAGCTGTAAACTATT 64 27242389 0.828264264 17 58 498 0.935897436 1.562292864 0.141025641 0.1875 0.333333333 64 4 1 73 3R:27242365-27242489 6 CG18766 FBtr0085123|FBtr0085122|FBtr0333327 27242333|27242333|27242333 27242709|27242709|27242709 AGCTGT 6mer3-8 dme-miR-1008-3p 3R - 27242359 27242452 3'utr CG18766 FlyBase G41586.1 AGGGGGCTGGATCGATCAATCGTGCATAGAGATCCTAGGGAGTACATTACATTTAGACACCATTTCCTACTGTTAGCTGTAAACTATTATGCAT 40 27242389 0.862003502 10 38 310 0.98 1.69019608 0.22 0.2 0.36 40 1 0 49 3R:27242359-27242452 6 36 2121 FBgn0042111 927.4033333 71.10333333 109.1233333 0.038818062 0.506305377 0.329901946 11 11 11 0.25 dme-miR-8-3p 7mer-m8 CAGTATT 3R 27242531 27242537 - 3R_27242531_27242537_- 0.661579079 0.661596525 0.661587802 1.23E-05 CG18766 FBtr0333327|FBtr0085122|FBtr0085123 27242333|27242333|27242333 27242709|27242709|27242709 3R - 27242490 27242549 3'utr CG18766 FlyBase G55085.2 ACACACGGCATACAGTATTTTTTGTATAGTTAAAATATACATTGGAGTTTTAGTTCTCGA 58 27242539 0.907122899 11 53 523 0.925373134 1.315270435 0 0.155172414 0.268656716 58 3 2 62 3R:27242490-27242549 7 CG18766 FBtr0085123|FBtr0085122|FBtr0333327 27242333|27242333|27242333 27242709|27242709|27242709 CAGTATT 7mer-m8 dme-miR-8-3p 3R - 27242476 27242548 3'utr CG18766 FlyBase G41587.1 CACACGGCATACAGTATTTTTTGTATAGTTAAAATATACATTGGAGTTTTAGTTCTCGACGATCGCGCCCTCG 27 27242529 0.990119859 7 25 250 0.925 1.568201724 0.05 0.333333333 0.55 27 3 0 37 3R:27242476-27242548 7 36 2122 FBgn0042111 927.4033333 71.10333333 109.1233333 0.038818062 0.506305377 0.329901946 2 -8 -3 0.25 dme-miR-970-3p 6mer3-8 TCTTAT 3R 27256336 27256341 + 3R_27256336_27256341_+ 0.968165406 0.970043752 0.969104579 0.001328229 TfIIA-L FBtr0085156|FBtr0085155|FBtr0085154 27256140|27256140|27256140 27256463|27256463|27256463 3R + 27256314 27256423 3'utr TfIIA-L FlyBase G46196.1 ACGTACTCGGGCCGACACTGTATCTTATTTTAGTTCCATCTGTTTTGTATTACGATAGCTTAAGGGTGTGTTGCAACCAACCATCTCGATTAAATGTATTAGAGTGCCGC 19 27256336 0.982208629 10 18 141 1 1.322219295 0.238095238 0.105263158 0.19047619 19 0 0 21 3R:27256314-27256423 6 TfIIA-L FBtr0085154|FBtr0085155|FBtr0085156 27256140|27256140|27256140 27256463|27256463|27256463 TCTTAT 6mer3-8 dme-miR-970-3p 3R + 27256310 27256346 3'utr TfIIA-L FlyBase G34842.1 AGCAACGTACTCGGGCCGACACTGTATCTTATTTTAG 9 27256333 0.783779911 6 9 56 1 1.255272505 0.166666667 0.333333333 0.666666667 9 0 0 18 3R:27256310-27256346 6 8.5 2123 FBgn0011289 653.3333333 54.7 83.7 0.013010204 0.155393053 0.101553166 0 3 1.5 0.25 dme-miR-1012-3p 8mer-A1 TTGACTAA 3R 27257031 27257038 - 3R_27257031_27257038_- 0.619987952 0.590715971 0.605351961 0.02069843 woc FBtr0085178|FBtr0334730|FBtr0112857|FBtr0334731 27256593|27256593|27256593|27256593 27257305|27257305|27257305|27257305 3R - 27256966 27257130 5'utr-coding woc FlyBase G55098.1 ACGCATATTTCGATTGTCTCTAGTTGCGATAACGCTGATGGAGGTGACCTTGTATAAAATGTGAACGCCAACCAAGCACATCTCACTTTCGATTGACTAAACTTAATCTAGGAATCAAAAAAATCCAAGCAGCAATATACACAACTAAACTTAACACCCACTCAC 44 27257038 0.898756544 18 41 267 0.957446809 1.352182518 0.234042553 0.068181818 0.127659574 44 1 1 45 3R:27256966-27257130 8 woc FBtr0112857|FBtr0334731|FBtr0085178|FBtr0334730 27256593|27256593|27256593|27256593 27257305|27257305|27257305|27257305 TTGACTAA 8mer-A1 dme-miR-1012-3p 3R - 27256964 27257130 5'utr-coding woc FlyBase G41595.1 ACGCATATTTCGATTGTCTCTAGTTGCGATAACGCTGATGGAGGTGACCTTGTATAAAATGTGAACGCCAACCAAGCACATCTCACTTTCGATTGACTAAACTTAATCTAGGAATCAAAAAAATCCAAGCAGCAATATACACAACTAAACTTAACACCCACTCACAT 31 27257038 0.977449356 15 31 200 1 1.672097858 0.085106383 0.419354839 0.617021277 31 0 0 47 3R:27256964-27257130 8 14 2124 FBgn0010328 3628.043333 70.90333333 108.5766667 0.003858829 0.19745193 0.128941148 0 0 0 0.25 dme-miR-14-3p 6mer3-8 AAGACT 3R 27277424 27277429 - 3R_27277424_27277429_- 0.998202193 0.941796579 0.969999386 0.039884782 mrt FBtr0305972|FBtr0085174|FBtr0305971|FBtr0305974|FBtr0305975|FBtr0305973 27277247|27277247|27277247|27277247|27277247|27277247 27277589|27277589|27277589|27277589|27277589|27277589 3R - 27277394 27277467 3'utr mrt FlyBase G55151.1 ATATATATATTCCTAGAGCCAGACCCGCGCATTGTTAAAAGACTTGATTATATTTAAGCATTAATACATAAATG 90 27277421 0.960337608 13 80 707 0.897196262 1.505149978 0.242990654 0.155555556 0.289719626 90 9 2 96 3R:27277394-27277467 6 mrt FBtr0305975|FBtr0305973|FBtr0305971|FBtr0305974|FBtr0305972|FBtr0085174 27277247|27277247|27277247|27277247|27277247|27277247 27277589|27277589|27277589|27277589|27277589|27277589 AAGACT 6mer3-8 dme-miR-14-3p 3R - 27277383 27277469 3'utr mrt FlyBase G41635.1 ATATATATATATTCCTAGAGCCAGACCCGCGCATTGTTAAAAGACTTGATTATATTTAAGCATTAATACATAAATGAAACCTAAAGT 67 27277421 0.989928223 11 58 572 0.901098901 1.311753861 0.428571429 0.208955224 0.417582418 67 6 3 82 3R:27277383-27277469 6 66 2125 FBgn0039507 449.7733333 19.81666667 30.52666667 0.14674058 3.330529857 2.162044114 -8 -8 -8 0.25 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 27548254 27548261 - 3R_27548254_27548261_- 0.385418423 0.336421963 0.360920193 0.034645687 Klp98A FBtr0085211|FBtr0304671 27547773|27547773 27548733|27548733 3R - 27548235 27548309 3'utr Klp98A FlyBase G55172.1 TATACGCATAGGTGTACGACTTCCAAAAAGTTATTCCAGTTATTTAGTCTGTGATTGCCAACTGAAGTTATAGAT 51 27548254 0.852845016 12 49 468 0.967741935 1.77815125 0.064516129 0.117647059 0.274193548 51 2 0 60 3R:27548235-27548309 8 Klp98A FBtr0085211|FBtr0304671 27547773|27547773 27548733|27548733 CTGTGATT 8mer-m1 dme-miR-308-3p 3R - 27548234 27548278 3'utr Klp98A FlyBase G41649.1 TATTCCAGTTATTTAGTCTGTGATTGCCAACTGAAGTTATAGATC 32 27548254 0.81003435 5 28 296 0.894736842 1.707570176 0.01754386 0.5 0.719298246 32 6 0 51 3R:27548234-27548278 8 38 2126 FBgn0004387 717.51 15.74333333 24.23 0.052960934 2.413720093 1.568303756 -7 -7 -7 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 27562765 27562770 - 3R_27562765_27562770_- 0.980878077 0.966349269 0.973613673 0.010273413 wdb FBtr0085205|FBtr0085205|FBtr0085205|FBtr0085204|FBtr0085204|FBtr0085204|FBtr0085208|FBtr0085208|FBtr0085208 27561673|27561673|27561673|27561673|27561673|27561673|27561673|27561673|27561673 27565568|27565568|27565568|27565568|27565568|27565568|27565568|27565568|27565568 3R - 27562728 27562780 3'utr wdb FlyBase G55187.1 TCGTTTGTTTTGTGATCAACACCTTTGTTGCACTCTGAGTTAATCTGTTTAGT 9 27562771 0.990109938 6 9 96 1 1.079181246 0.666666667 0.222222222 0.416666667 9 0 0 12 3R:27562728-27562780 6 wdb FBtr0085208|FBtr0085208|FBtr0085208|FBtr0085204|FBtr0085204|FBtr0085204|FBtr0085205|FBtr0085205|FBtr0085205 27561673|27561673|27561673|27561673|27561673|27561673|27561673|27561673|27561673 27565568|27565568|27565568|27565568|27565568|27565568|27565568|27565568|27565568 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 27562754 27562807 3'utr wdb FlyBase G41661.1 AATGATTATTGCCTCTTCATCATCATTTCGTTTGTTTTGTGATCAACACCTTTG 12 27562771 0.994136184 4 9 124 0.888888889 0.726998728 0.277777778 0.333333333 0.555555556 12 0 2 16 3R:27562754-27562807 6 8.5 2127 FBgn0027492 2914.523333 83.19 128.17 0.002916429 0.102175742 0.066318171 1 1 1 0.25 dme-miR-2535b-3p 7mer-m1 CGTGAGT 3R 27563627 27563633 - 3R_27563627_27563633_- 0.507382552 0.643796512 0.575589532 0.096459194 wdb FBtr0085205|FBtr0085204|FBtr0085208 27561673|27561673|27561673 27565568|27565568|27565568 3R - 27563618 27563653 3'utr wdb FlyBase G55189.1 TGATAATTGTGTCTGTGAATCGTGAGTTATTATACA 12 27563627 0.791279343 4 11 108 0.928571429 1.113943352 0.357142857 0.166666667 0.285714286 12 1 0 13 3R:27563618-27563653 7 wdb FBtr0085208|FBtr0085204|FBtr0085205 27561673|27561673|27561673 27565568|27565568|27565568 CGTGAGT 7mer-m1 dme-miR-2535b-3p 3R - 27563614 27563655 3'utr wdb FlyBase G41663.1 AATGATAATTGTGTCTGTGAATCGTGAGTTATTATACACATA 15 27563645 0.700494477 6 15 136 1 1.322219295 0.238095238 0.266666667 0.476190476 15 0 0 21 3R:27563614-27563655 7 13 2128 FBgn0027492 2914.523333 83.19 128.17 0.004460421 0.156268782 0.101427791 -6 12 3 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 3R 27585541 27585546 + 3R_27585541_27585546_+ 0.859522457 0.74371256 0.801617508 0.081889966 pins FBtr0085189 27585321 27586376 3R + 27585479 27585565 3'utr pins FlyBase G46255.1 AAGATTTATATATACACACGTACACGAAAAGCATTAATTTATGAATAGCAACTAACCACGTAACCAAATATTAGGGGTGTATAGGGC 8 27585549 0.942401673 6 8 37 1 0.903089987 0.5 0 0 8 0 0 8 3R:27585479-27585565 6 pins FBtr0085189 27585321 27586376 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 27585525 27585568 3'utr pins FlyBase G34896.1 AGCAACTAACCACGTAACCAAATATTAGGGGTGTATAGGGCCTC 5 27585549 0.971052433 3 4 24 0.857142857 0.77815125 0.142857143 0.4 0.571428571 5 1 0 6 3R:27585525-27585568 6 4 2129 FBgn0040080 1104.993333 40.80333333 62.47 0.003619931 0.098031207 0.064030735 -8 -8 -8 0.25 dme-miR-980-3p 6mer3-8 GGCAGC 3R 27598074 27598079 - 3R_27598074_27598079_- 0.957556066 0.959252951 0.958404509 0.001199889 dsd FBtr0335247|FBtr0301390 27597561|27597759 27599034|27599034 3R - 27598058 27598103 3'utr dsd FlyBase G55223.1 AAACTAATCGTAAGGTTTCCTCTTGGCAGCAGCAAACAAACAAAAA 40 27598080 0.966817754 2 40 216 1 1.698970004 0.06 0.2 0.36 40 0 0 50 3R:27598058-27598103 6 dsd FBtr0335247|FBtr0301390 27597561|27597759 27599034|27599034 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 27598059 27598104 3'utr dsd FlyBase G41686.1 CAAACTAATCGTAAGGTTTCCTCTTGGCAGCAGCAAACAAACAAAA 28 27598080 0.970932985 2 28 162 1 1.556302501 0.222222222 0.285714286 0.444444444 28 0 0 36 3R:27598059-27598104 6 34 2130 FBgn0039528 2636.286667 54.87666667 84.28333333 0.012896928 0.61957116 0.403401226 1 1 1 0.25 dme-miR-1003-3p 6mer2-7 TGTGAG 3R 27598556 27598561 - 3R_27598556_27598561_- 0.755170367 0.671568315 0.713369341 0.059115612 dsd FBtr0335247|FBtr0301390 27597561|27597759 27599034|27599034 3R - 27598509 27598575 3'utr dsd FlyBase G55226.1 ATTTATGCAAATTTTGTGAGCTGCCCCGGCAGCAGTTGCACCATATGCCGCGACAGAAACAGAGTTA 35 27598562 0.976797909 6 33 211 0.928571429 1.290034611 0.238095238 0.2 0.333333333 35 2 1 39 3R:27598509-27598575 6 dsd FBtr0335247|FBtr0301390 27597561|27597759 27599034|27599034 TGTGAG 6mer2-7 dme-miR-1003-3p 3R - 27598538 27598572 3'utr dsd FlyBase G41689.1 TATGCAAATTTTGTGAGCTGCCCCGGCAGCAGTTG 15 27598562 0.580762985 4 12 94 0.826086957 0.801632346 0.086956522 0.533333333 0.695652174 15 2 2 19 3R:27598538-27598572 6 24 2131 FBgn0039528 2636.286667 54.87666667 84.28333333 0.009103714 0.437344348 0.284753807 1 1 1 0.25 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 27639105 27639112 + 3R_27639105_27639112_+ 0.630953566 0.631011115 0.63098234 4.07E-05 Mtl FBtr0085192|FBtr0085193 27638699|27638699 27639871|27639871 3R + 27639078 27639156 3'utr Mtl FlyBase G46263.1 AAATCTAATGCACTACATATGTAGAAATCTAGTCAATTGAATCGAATGTATTGTACGAATAGTATCTGGCAGAAAGAGA 45 27639105 0.984277687 10 42 334 0.928571429 1.113943352 0.517857143 0.155555556 0.321428571 45 1 3 52 3R:27639078-27639156 8 Mtl FBtr0085193|FBtr0085192 27638699|27638699 27639871|27639871 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 27639078 27639153 3'utr Mtl FlyBase G34904.1 AAATCTAATGCACTACATATGTAGAAATCTAGTCAATTGAATCGAATGTATTGTACGAATAGTATCTGGCAGAAAG 48 27639114 0.985072996 10 42 334 0.902777778 1.511883361 0.430555556 0.416666667 0.611111111 48 6 1 65 3R:27639078-27639153 8 44 2132 FBgn0039532 1160.21 67.97 104.5233333 0.037924169 0.647344417 0.420958638 0 -9 -4.5 0.25 dme-miR-283-5p 7mer-m8 TGATATT 3R 27639341 27639347 + 3R_27639341_27639347_+ 0.600647786 0.489749845 0.545198815 0.078416728 Mtl FBtr0085192|FBtr0085193 27638699|27638699 27639871|27639871 3R + 27639306 27639361 3'utr Mtl FlyBase G46265.1 ACTTGACGACGAGCTCTTAGAGAAGCCACTTTTTATGATATTCAAGCATGCGCATT 7 27639341 0.986785929 3 7 56 1 0.84509804 0 0 0 7 0 0 7 3R:27639306-27639361 7 Mtl FBtr0085193|FBtr0085192 27638699|27638699 27639871|27639871 TGATATT 7mer-m8 dme-miR-283-5p 3R + 27639287 27639352 3'utr Mtl FlyBase G34906.1 TCTGAAACCAGGCCAATTCACTTGACGACGAGCTCTTAGAGAAGCCACTTTTTATGATATTCAAGC 7 27639322 0.977519334 3 6 40 0.928571429 1.113943352 0.357142857 0.714285714 0.857142857 7 1 0 13 3R:27639287-27639352 7 4 2133 FBgn0039532 1160.21 67.97 104.5233333 0.003447652 0.058849492 0.038268967 0 19 9.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 27696484 27696491 + 3R_27696484_27696491_+ 0.645812586 0.644620716 0.645216651 0.000842801 CG43320 FBtr0306924|FBtr0306924|FBtr0306924 27696450|27696450|27696450 27696531|27696531|27696531 3R + 27696460 27696503 3'utr CG43320 FlyBase G46282.1 ACGTGTCTAGGGTAAGAACGTTTACTGTGATACGTGATAATAAT 61 27696481 0.756387817 6 60 503 0.985294118 1.826074803 0.455882353 0.114754098 0.205882353 61 1 0 67 3R:27696460-27696503 8 CG43320 FBtr0306924|FBtr0306924|FBtr0306924 27696450|27696450|27696450 27696531|27696531|27696531 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 27696459 27696500 3'utr CG43320 FlyBase G34922.1 CACGTGTCTAGGGTAAGAACGTTTACTGTGATACGTGATAAT 39 27696481 0.761456478 4 38 315 0.98245614 1.748188027 0.596491228 0.333333333 0.543859649 39 1 0 56 3R:27696459-27696500 8 50 2134 FBgn0263025 42.64 4.076666667 6.266666667 1.17260788 12.26492232 7.978723404 3 3 3 0.25 dme-miR-307a-3p 7mer-A1 GTTGTGA 3R 27933007 27933013 - 3R_27933007_27933013_- 0.799286939 0.823341395 0.811314167 0.0170091 Mes-4 FBtr0085267|FBtr0335014 27932980|27932980 27933182|27933182 3R - 27933001 27933038 3'utr Mes-4 FlyBase G55292.1 TGGAGATTGTGCTGAACAGATGGATGTTGTGAAAATAA 6 27933014 0.71400301 4 5 33 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3R:27933001-27933038 7 Mes-4 FBtr0335014|FBtr0085267 27932980|27932980 27933182|27933182 GTTGTGA 7mer-A1 dme-miR-307a-3p 3R - 27932989 27933035 3'utr Mes-4 FlyBase G41727.1 AGATTGTGCTGAACAGATGGATGTTGTGAAAATAAAGTGAGACGATT 12 27933017 0.861487842 7 10 64 0.875 0.84509804 0.375 0.25 0.4375 12 1 1 14 3R:27932989-27933035 7 6.5 2135 FBgn0039559 1839.39 48.38 74.15333333 0.00353378 0.134353038 0.087656208 1 4 2.5 0.25 dme-bantam-3p 7mer-m8 TGATCTC 3R 27942649 27942655 + 3R_27942649_27942655_+ 0.584220012 0.624893992 0.604557002 0.028760861 CG5514 FBtr0301143 27942441 27942778 3R + 27942554 27942675 intron-3'utr CG5514 FlyBase G46349.1 TGCGTGTGACTAAAGTGCTTGTTTTTATCAGCAGACGCCCTGTCCGCCAGGCGACTCAGCAAGAAGCTCTGCCAGCAGCAGCGGTACACCAACGATGATCTCTACAAGCCCCGTCCAATCCT 155 27942649 0.945020675 10 151 617 0.97740113 1.937016107 0.192090395 0.103225806 0.214689266 155 3 1 173 3R:27942554-27942675 7 CG5514 FBtr0085252|FBtr0301143 27942441|27942441 27942778|27942778 TGATCTC 7mer-m8 dme-bantam-3p 3R + 27942622 27942724 stop_codon CG5514 FlyBase G34979.1 CTGCCAGCAGCAGCGGTACACCAACGATGATCTCTACAAGCCCCGTCCAATCCTGTCGCAGCGCTCTCGTCGCCGGGGCCTGGACTCCATTCTCTAGCCAACG 80 27942649 0.939774268 11 78 318 0.9609375 2.089905111 0.25 0.425 0.640625 80 5 0 123 3R:27942622-27942724 7 109 2136 FBgn0039560 308.5966667 10.24 15.73 0.353211851 10.64453125 6.929434202 0 0 0 0.25 dme-miR-276a-3p 7mer-A1 GTTCCTA 3R 28520850 28520856 - 3R_28520850_28520856_- 0.480419683 0.520850258 0.50063497 0.028588751 Ppn FBtr0301837|FBtr0300337|FBtr0301839|FBtr0301838 28520663|28520663|28520663|28520663 28521128|28521128|28521128|28521128 3R - 28520835 28520912 3'utr Ppn FlyBase G55383.1 AGTATTTTACTCTCTTCCAGGACAAAAGCAAATAGTATTAGTGATTTTATGTTTGTGTTCCTATTTATTCTTGATAAC 13 28520859 0.91937244 10 12 151 0.9375 1.176091259 0.3125 0.230769231 0.375 13 1 0 15 3R:28520835-28520912 7 Ppn FBtr0301839|FBtr0301838|FBtr0301837|FBtr0300337 28520663|28520663|28520663|28520663 28521128|28521128|28521128|28521128 GTTCCTA 7mer-A1 dme-miR-276a-3p 3R - 28520823 28520889 3'utr Ppn FlyBase G41808.1 AAAAGCAAATAGTATTAGTGATTTTATGTTTGTGTTCCTATTTATTCTTGATAACGAGTAACCTTAA 9 28520859 0.990984146 7 8 83 0.909090909 1 0.090909091 0.111111111 0.272727273 9 1 0 10 3R:28520823-28520889 7 6 2137 FBgn0003137 888.9833333 12.49 19.08666667 0.006749283 0.480384307 0.314355571 3 3 3 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 28609248 28609254 - 3R_28609248_28609254_- 0.795977238 0.800115291 0.798046264 0.002926079 CG10011 FBtr0085319|FBtr0085319|FBtr0085319 28607937|28607937|28607937 28609394|28609394|28609394 3R - 28609241 28609283 3'utr CG10011 FlyBase G55402.1 TTAGTACTTTTCAGAAAGTATTTGTTTTTTGTGATAGTTTCAA 13 28609255 0.707454133 3 11 173 0.947368421 1.255272505 0.210526316 0.307692308 0.526315789 13 1 0 18 3R:28609241-28609283 7 CG10011 FBtr0085319|FBtr0085319|FBtr0085319 28607937|28607937|28607937 28609394|28609394|28609394 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 28609241 28609270 3'utr CG10011 FlyBase G41818.1 GAAAGTATTTGTTTTTTGTGATAGTTTCAA 5 28609255 0.666793151 3 5 64 1 0.84509804 0.571428571 0.4 0.571428571 5 0 0 7 3R:28609241-28609270 7 8.5 2138 FBgn0039590 962.0733333 13.5 20.90333333 0.008835085 0.62962963 0.406633711 1 1 1 0.25 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 28695565 28695572 + 3R_28695565_28695572_+ 0.385558322 0.38546433 0.385511326 6.65E-05 CG9990 FBtr0085309|FBtr0305087|FBtr0336787|FBtr0303343|FBtr0305088|FBtr0085308 28695157|28695157|28695157|28695157|28695157|28695157 28695939|28695939|28695939|28695939|28695939|28695939 3R + 28695543 28695578 3'utr CG9990 FlyBase G46413.1 AATTTTATATATTTTCAATGGACTGTGATTGTTTTT 15 28695561 0.736746895 5 14 159 0.95 1.278753601 0.05 0.266666667 0.45 15 1 0 19 3R:28695543-28695578 8 CG9990 FBtr0305088|FBtr0085308|FBtr0336787|FBtr0303343|FBtr0085309|FBtr0305087 28695157|28695157|28695157|28695157|28695157|28695157 28695939|28695939|28695939|28695939|28695939|28695939 CTGTGATT 8mer-m1 dme-miR-308-3p 3R + 28695548 28695583 3'utr CG9990 FlyBase G35026.1 TATATATTTTCAATGGACTGTGATTGTTTTTTCTAC 13 28695560 0.745503027 6 13 126 1 1.230448921 0.352941176 0.230769231 0.411764706 13 0 0 17 3R:28695548-28695583 8 14 2139 FBgn0039594 1 0.036666667 0.056666667 14 381.8181818 247.0588235 4 5 4.5 0.25 dme-bantam-3p 7mer-m8 TGATCTC 3R 28816496 28816502 + 3R_28816496_28816502_+ 0.523535566 0.492960301 0.508247933 0.021620002 CG1646 FBtr0113301 28814209 28817354 3R + 28816478 28816524 3'utr CG1646 FlyBase G46438.1 CCTCAATAAAATCTGTCATGATCTCGACGCCGGCTTGGCCGCCCTGC 71 28816496 0.711954305 7 63 410 0.880952381 1.86923172 0.392857143 0.169014085 0.297619048 71 10 0 74 3R:28816478-28816524 7 CG1646 FBtr0113301 28814209 28817354 TGATCTC 7mer-m8 dme-bantam-3p 3R + 28816472 28816551 3'utr CG1646 FlyBase G35043.1 CCGTTTCCTCAATAAAATCTGTCATGATCTCGACGCCGGCTTGGCCGCCCTGCAGCAGGCGCTGGAACGTGATCCAGCCA 46 28816496 0.987401779 9 45 254 0.985294118 1.826074803 0.323529412 0.282608696 0.514705882 46 1 0 67 3R:28816472-28816551 7 55 2140 FBgn0039600 1138.88 36.74333333 56.61666667 0.04829306 1.496870181 0.971445393 0 0 0 0.25 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3R 28816868 28816873 + 3R_28816868_28816873_+ 0.960899449 0.73931753 0.850108489 0.156682064 CG1646 FBtr0113301 28814209 28817354 3R + 28816855 28816892 3'utr CG1646 FlyBase G46439.1 AGTGATGGCAGTCCTAGTCGCAAAAACTCATCAAGCAG 6 28816865 0.923141336 4 6 18 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3R:28816855-28816892 6 CG1646 FBtr0113301 28814209 28817354 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3R + 28816855 28816884 3'utr CG1646 FlyBase G35044.1 AGTGATGGCAGTCCTAGTCGCAAAAACTCA 6 28816867 0.912319201 3 6 23 1 0.903089987 0 0.333333333 0.5 6 0 0 8 3R:28816855-28816884 6 5.5 2141 FBgn0039600 1138.88 36.74333333 56.61666667 0.004829306 0.149687018 0.097144539 3 1 2 0.25 dme-miR-33-5p 7mer-A1 AATGCAA 3R 28824625 28824631 - 3R_28824625_28824631_- 0.76816869 0.73877088 0.753469785 0.020787384 WASp FBtr0085354|FBtr0085352|FBtr0085353|FBtr0336768 28824504|28824504|28824504|28824504 28825449|28825449|28825449|28825449 3R - 28824606 28824665 3'utr WASp FlyBase G55426.1 CGCATAAGTATTTTCTTTTAGTTCGAGCGCATTTAATGCAAACTTGTAGTCATTTTTCTT 17 28824633 0.819089351 5 15 150 0.944444444 1.230448921 0.166666667 0.058823529 0.111111111 17 1 0 17 3R:28824606-28824665 7 WASp FBtr0085354|FBtr0085352|FBtr0085353|FBtr0336768 28824504|28824504|28824504|28824504 28825449|28825449|28825449|28825449 AATGCAA 7mer-A1 dme-miR-33-5p 3R - 28824593 28824650 3'utr WASp FlyBase G41841.1 TTTTAGTTCGAGCGCATTTAATGCAAACTTGTAGTCATTTTTCTTCTGTGTGTTTGTA 14 28824633 0.982650081 4 13 104 0.952380952 1.301029996 0.285714286 0.285714286 0.523809524 14 1 0 20 3R:28824593-28824650 7 13.5 2142 FBgn0024273 698.2566667 30.35666667 46.61666667 0.019333865 0.444712858 0.289595996 2 2 2 0.25 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3R 28869775 28869780 + 3R_28869775_28869780_+ 0.522140823 0.768213433 0.645177128 0.173999604 spg FBtr0330304|FBtr0336766 28869617|28869062 28870439|28870439 3R + 28869755 28869838 3'utr spg FlyBase G46479.1 ATTTTTACTCAAATTATTTTTGGTGCCAAATTTTTGCTGCAAGTCCAAAGCGCAATATAAACAAATGTTGTAATGATATAGGTT 15 28869775 0.976788254 8 15 132 1 1.204119983 0.125 0.066666667 0.125 15 0 0 16 3R:28869755-28869838 6 spg FBtr0336766|FBtr0330304 28869062|28869617 28870439|28870439 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3R + 28869765 28869793 3'utr spg FlyBase G35070.1 AAATTATTTTTGGTGCCAAATTTTTGCTG 10 28869774 0.71298109 2 10 95 1 1.204119983 0.3125 0.5 0.6875 10 0 0 16 3R:28869765-28869793 6 9.5 2143 FBgn0264324 552.3333333 8.306666667 12.79 0.017199759 1.143659711 0.742767787 0 1 0.5 0.25 dme-miR-33-5p 7mer-m8 CAATGCA 3R 28870069 28870075 + 3R_28870069_28870075_+ 0.636040132 0.593218745 0.614629438 0.030279302 spg FBtr0330304|FBtr0336766 28869617|28869062 28870439|28870439 3R + 28869996 28870099 3'utr spg FlyBase G46481.1 TCAGAACGCTAATCAAAAACGATCAACGCAAAATATATACACTGAAAACAAAGCAGGACACCGACAAAATGTGCAATGCAGTTTTTACTTTAACGAATATAGCC 22 28870067 0.950259749 7 19 90 0.875 1.021189299 0.125 0.090909091 0.166666667 22 2 1 21 3R:28869996-28870099 7 spg FBtr0336766|FBtr0330304 28869062|28869617 28870439|28870439 CAATGCA 7mer-m8 dme-miR-33-5p 3R + 28870046 28870081 3'utr spg FlyBase G35072.1 AAGCAGGACACCGACAAAATGTGCAATGCAGTTTTT 9 28870066 0.906629325 4 8 26 0.846153846 1.041392685 0.538461538 0.333333333 0.538461538 9 2 0 11 3R:28870046-28870081 7 11.5 2144 FBgn0264324 552.3333333 8.306666667 12.79 0.02082076 1.384430177 0.899139953 2 3 2.5 0.25 dme-miR-79-3p 6mer3-8 TAGCTT 3R 28870177 28870182 + 3R_28870177_28870182_+ 0.691095964 0.578682498 0.634889231 0.079488348 spg FBtr0330304|FBtr0336766 28869617|28869062 28870439|28870439 3R + 28870143 28870194 3'utr spg FlyBase G46482.1 ATGCGAACGGCAATTAGGAATTTTAAAGTGCTACTAGCTTCATAACGAATCA 16 28870164 0.975066441 9 15 111 0.952380952 1 0.095238095 0.25 0.428571429 16 0 1 20 3R:28870143-28870194 6 spg FBtr0336766|FBtr0330304 28869062|28869617 28870439|28870439 TAGCTT 6mer3-8 dme-miR-79-3p 3R + 28870156 28870190 3'utr spg FlyBase G35073.1 TTAGGAATTTTAAAGTGCTACTAGCTTCATAACGA 5 28870165 0.767774407 4 4 39 0.857142857 0.77815125 0.142857143 0.4 0.571428571 5 1 0 6 3R:28870156-28870190 6 9 2145 FBgn0264324 552.3333333 8.306666667 12.79 0.016294508 1.083467095 0.703674746 13 12 12.5 0.25 dme-miR-318-3p 7mer-m8 CCCAGTG 3R 29046697 29046703 + 3R_29046697_29046703_+ 0.569852908 0.559108283 0.564480595 0.00759758 Pkc98E FBtr0085359|FBtr0339149|FBtr0339150|FBtr0301516 29046223|29046223|29046223|29046223 29049148|29047034|29047034|29047034 3R + 29046657 29046718 3'utr Pkc98E FlyBase G46554.1 AAGAAAGAAGGAAGAGATACCCCCACCCATCTAGTCAATGCCCAGTGGCTGAGTGCATTTTG 85 29046686 0.958026863 8 78 359 0.928571429 1.959041392 0.224489796 0.141176471 0.255102041 85 7 0 91 3R:29046657-29046718 7 Pkc98E FBtr0339150|FBtr0301516|FBtr0085359|FBtr0339149 29046223|29046223|29046223|29046223 29047034|29047034|29049148|29047034 CCCAGTG 7mer-m8 dme-miR-318-3p 3R + 29046660 29046729 3'utr Pkc98E FlyBase G35122.1 AAAGAAGGAAGAGATACCCCCACCCATCTAGTCAATGCCCAGTGGCTGAGTGCATTTTGTTATTAGTTAT 61 29046686 0.929056765 9 55 287 0.925531915 1.638489257 0.329787234 0.393442623 0.606382979 61 6 1 87 3R:29046660-29046729 7 58 2146 FBgn0003093 985.62 22.17 34.02333333 0.058846208 2.616147948 1.704712452 11 11 11 0.25 dme-miR-8-3p 7mer-A1 AGTATTA 3R 29046965 29046971 + 3R_29046965_29046971_+ 0.804762689 0.823333529 0.814048109 0.013131539 Pkc98E FBtr0085359|FBtr0339149|FBtr0339150|FBtr0301516 29046223|29046223|29046223|29046223 29049148|29047034|29047034|29047034 3R + 29046945 29046992 3'utr Pkc98E FlyBase G46555.1 CTTGCACAACTTCCTTCTCAAGTATTAAAGCGATATTATTTTAAAGTT 12 29046961 0.908393151 7 8 103 0.769230769 0.698970004 0.307692308 0.083333333 0.153846154 12 2 1 10 3R:29046945-29046992 7 Pkc98E FBtr0339150|FBtr0301516|FBtr0085359|FBtr0339149 29046223|29046223|29046223|29046223 29047034|29047034|29049148|29047034 AGTATTA 7mer-A1 dme-miR-8-3p 3R + 29046894 29047002 3'utr Pkc98E FlyBase G35123.1 AATACATGCGACCACACGGATCTAGTTTCATTTGTTTTACATATTCGAAATCTTGCACAACTTCCTTCTCAAGTATTAAAGCGATATTATTTTAAAGTTACCTTATTGT 15 29046961 0.992828398 11 13 141 0.826086957 1.278753601 0.086956522 0.4 0.608695652 15 4 0 19 3R:29046894-29047002 7 8 2147 FBgn0003093 985.62 22.17 34.02333333 0.008116718 0.360847993 0.235132752 4 4 4 0.25 dme-miR-305-5p 7mer-m1 GTACAAT 3R 29050677 29050683 + 3R_29050677_29050683_+ 0.765570567 0.765586043 0.765578305 1.09E-05 CG11837 FBtr0085360 29050645 29050721 3R + 29050662 29050693 3'utr CG11837 FlyBase G46562.1 AGATCGTTAAACTTTGTACAATTTACCAACAT 8 29050675 0.626237893 4 8 70 1 0.903089987 0 0 0 8 0 0 8 3R:29050662-29050693 7 CG11837 FBtr0085360 29050645 29050721 GTACAAT 7mer-m1 dme-miR-305-5p 3R + 29050657 29050694 3'utr CG11837 FlyBase G35126.1 TCTATAGATCGTTAAACTTTGTACAATTTACCAACATT 9 29050683 0.596077959 4 9 72 1 1.113943352 0 0.333333333 0.538461538 9 0 0 13 3R:29050657-29050694 7 8 2148 FBgn0039627 323 36.6 56.57333333 0.024767802 0.218579235 0.14140938 2 -6 -2 0.25 dme-bantam-3p 6mer3-8 TGATCT 3R 29058766 29058771 + 3R_29058766_29058771_+ 0.985225887 0.899017541 0.942121714 0.060958544 Sirt7 FBtr0085364 29058678 29059204 3R + 29058723 29058791 3'utr Sirt7 FlyBase G46565.1 GGTGAAATGATTACCCTTGAGTCAATGGCTTTTTGGAAACGTTTGATCTTATACTTGATATGAAGGAGC 22 29058774 0.854690217 10 22 177 1 1.431363764 0.296296296 0.181818182 0.333333333 22 0 0 27 3R:29058723-29058791 6 Sirt7 FBtr0085364 29058678 29059204 TGATCT 6mer3-8 dme-bantam-3p 3R + 29058690 29058779 3'utr Sirt7 FlyBase G35128.1 ATGTACGGCCGTGATTCCTCCCTAAGATAAGAAGGTGAAATGATTACCCTTGAGTCAATGGCTTTTTGGAAACGTTTGATCTTATACTTG 23 29058765 0.987055649 12 21 181 0.90625 1.462397998 0.125 0.347826087 0.53125 23 3 0 29 3R:29058690-29058779 6 14 2149 FBgn0039631 118 4.676666667 7.163333333 0.118644068 2.993585175 1.954397394 -8 1 -3.5 0.25 dme-miR-980-3p 6mer3-8 GGCAGC 3R 29059718 29059723 - 3R_29059718_29059723_- 0.988168829 0.995889118 0.992028973 0.005459076 Cul5 FBtr0085417 29059270 29059952 3R - 29059680 29059744 3'utr Cul5 FlyBase G55498.1 TAAAAGACCCACACTCCAATCGGCAGCCATTTTCTCGTGTCCACGTCCTGTATTTGTGAAACTTT 43 29059725 0.931828011 7 42 222 0.980769231 1.707570176 0.096153846 0.186046512 0.326923077 43 1 0 51 3R:29059680-29059744 6 Cul5 FBtr0085417 29059270 29059952 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 29059710 29059744 3'utr Cul5 FlyBase G41879.2 TAAAAGACCCACACTCCAATCGGCAGCCATTTTCT 15 29059725 0.966945703 3 13 62 0.952380952 1.301029996 0.047619048 0.266666667 0.476190476 15 1 0 20 3R:29059710-29059744 6 27 2150 FBgn0039632 438.4633333 15.78333333 23.95 0.061578695 1.710665259 1.127348643 2 2 2 0.25 dme-miR-184-5p 6mer3-8 TGATAA 3R 29109378 29109383 - 3R_29109378_29109383_- 0.945254795 0.846886137 0.896070466 0.069557175 alpha-Man-Ib FBtr0085416 29109051 29109880 3R - 29109362 29109407 3'utr alpha-Man-Ib FlyBase G55513.1 TCGATTGTATAATATTCTGTGTACTGATAATTGTTATTTTGTAATT 24 29109390 0.643471361 6 23 257 1 1.397940009 0.08 0.041666667 0.08 24 0 0 25 3R:29109362-29109407 6 alpha-Man-Ib FBtr0085416 29109051 29109880 TGATAA 6mer3-8 dme-miR-184-5p 3R - 29109367 29109399 3'utr alpha-Man-Ib FlyBase G41889.1 ATAATATTCTGTGTACTGATAATTGTTATTTTG 13 29109387 0.695193212 6 11 155 0.863636364 1.278753601 0 0.461538462 0.681818182 13 3 0 19 3R:29109367-29109399 6 18 2151 FBgn0039634 927.67 35.07666667 53.86333333 0.019403452 0.513161646 0.334179095 7 4 5.5 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 29145582 29145589 + 3R_29145582_29145589_+ 0.602519978 0.611211501 0.60686574 0.006145819 CG14516 FBtr0085383|FBtr0085382|FBtr0335406 29145497|29145497|29145497 29145787|29145787|29145787 3R + 29145540 29145594 3'utr CG14516 FlyBase G46650.1 TATTAGATTTCGCAGCTGCAACTGCATGGGTTGGGCCACCAATGCATTTATGTGT 14 29145582 0.76462622 7 13 99 0.941176471 0.903089987 0.352941176 0.214285714 0.352941176 14 0 1 16 3R:29145540-29145594 8 CG14516 FBtr0335406|FBtr0085382|FBtr0085383 29145497|29145497|29145497 29145787|29145787|29145787 TGCATTTA 8mer-A1 dme-miR-277-3p 3R + 29145567 29145601 3'utr CG14516 FlyBase G35187.1 GGGTTGGGCCACCAATGCATTTATGTGTAATATTT 6 29145587 0.736312023 4 6 42 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3R:29145567-29145601 8 8.5 2152 FBgn0039640 168.03 5.77 8.72 0.050586205 1.473136915 0.974770642 0 -5 -2.5 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 29145737 29145744 + 3R_29145737_29145744_+ 0.50012015 0.493336829 0.49672849 0.004796588 CG14516 FBtr0085383|FBtr0085382|FBtr0335406 29145497|29145497|29145497 29145787|29145787|29145787 3R + 29145634 29145791 3'utr CG14516 FlyBase G46651.2 AAGAGAGAAAGCCCTTGGCAGATCGTCCAGAGCATCACGTTTTTCATTACTTTTAATGTATGCCTTCTTTTCATAACAATTATGAGTCTTGTAATTTTAATTTGTACTTAAATGTAATTGTAAATGTAAATGGAATTATAACATTGTTCGTCACAAAA 53 29145716 0.990092391 22 51 496 0.967213115 1.770852012 0.245901639 0.132075472 0.245901639 53 2 0 59 3R:29145634-29145791 8 CG14516 FBtr0335406|FBtr0085382|FBtr0085383 29145497|29145497|29145497 29145787|29145787|29145787 GTACTTAA 8mer-A1 dme-miR-252-5p 3R + 29145704 29145760 3'utr CG14516 FlyBase G35188.1 TCATAACAATTATGAGTCTTGTAATTTTAATTTGTACTTAAATGTAATTGTAAATGT 11 29145716 0.790802347 5 10 117 0.928571429 1.113943352 0.142857143 0.272727273 0.428571429 11 1 0 13 3R:29145704-29145760 8 13.5 2153 FBgn0039640 168.03 5.77 8.72 0.080342796 2.339688042 1.548165138 21 21 21 0.25 dme-miR-965-3p 7mer-m8 TACGCTT 3R 29149797 29149803 + 3R_29149797_29149803_+ 0.619160077 0.619986332 0.619573205 0.000584212 Pglym78 FBtr0100483|FBtr0100482|FBtr0085384 29149734|29149734|29149734 29149901|29149901|29149901 3R + 29149739 29149869 3'utr Pglym78 FlyBase G46655.1 CGCAGGCCACACCTCATGAGAATCCACTCAAATACGGCACAAGTCAGAGCATTCTGATTACGCTTCTGTTCAAGATGTAGCCAATCCCATTCGTTGTTGTTGTTCGCGTAGCAGTAATTGGTTCATCCCCA 70 29149796 0.986152669 14 68 579 0.987951807 1.913813852 0.409638554 0.157142857 0.289156627 70 1 0 82 3R:29149739-29149869 7 Pglym78 FBtr0085384|FBtr0100482|FBtr0100483 29149734|29149734|29149734 29149901|29149901|29149901 TACGCTT 7mer-m8 dme-miR-965-3p 3R + 29149742 29149846 3'utr Pglym78 FlyBase G35189.1 AGGCCACACCTCATGAGAATCCACTCAAATACGGCACAAGTCAGAGCATTCTGATTACGCTTCTGTTCAAGATGTAGCCAATCCCATTCGTTGTTGTTGTTCGCG 33 29149797 0.986685174 8 31 258 0.963636364 1.247154615 0.309090909 0.40625 0.654545455 32 0 2 53 3R:29149742-29149846 7 41 2154 FBgn0014869 753.3333333 91.53 139.47 0.054424779 0.447940566 0.293970029 1 0 0.5 0.25 dme-miR-8-3p 7mer-A1 AGTATTA 3R 29164609 29164615 + 3R_29164609_29164615_+ 0.82232002 0.787759625 0.805039822 0.024437893 CG11897 FBtr0085386|FBtr0085387 29164548|29164548 29164966|29164966 3R + 29164563 29164625 3'utr CG11897 FlyBase G46685.1 TCATCTACTTGTAGATTTGCTTAAGGTTTAGATCATAAGAACTGAAAGTATTATGTACATAGC 24 29164598 0.979632951 6 22 159 0.90625 1.161368002 0.0625 0.291666667 0.46875 24 2 1 29 3R:29164563-29164625 7 CG11897 FBtr0085387|FBtr0085386 29164548|29164548 29164966|29164966 AGTATTA 7mer-A1 dme-miR-8-3p 3R + 29164562 29164624 3'utr CG11897 FlyBase G35211.1 CTCATCTACTTGTAGATTTGCTTAAGGTTTAGATCATAAGAACTGAAAGTATTATGTACATAG 23 29164598 0.979230709 7 22 154 0.967741935 1.176091259 0.419354839 0.347826087 0.516129032 23 0 1 30 3R:29164562-29164624 7 20.5 2155 FBgn0039644 385.6666667 9.473333333 14.69333333 0.05315471 2.163969036 1.395190563 11 11 11 0.25 dme-miR-252-5p 7mer-m8 GTACTTA 3R 29164664 29164670 + 3R_29164664_29164670_+ 0.586616566 0.499359533 0.542988049 0.061700087 CG11897 FBtr0085386|FBtr0085387 29164548|29164548 29164966|29164966 3R + 29164643 29164687 3'utr CG11897 FlyBase G46686.1 TAACGAAATACCTATTGCCTTGTACTTACGGAATATTTGTAAGCT 18 29164662 0.690893157 5 17 133 1 1.301029996 0.15 0.111111111 0.2 18 0 0 20 3R:29164643-29164687 7 CG11897 FBtr0085387|FBtr0085386 29164548|29164548 29164966|29164966 GTACTTA 7mer-m8 dme-miR-252-5p 3R + 29164641 29164676 3'utr CG11897 FlyBase G35212.1 GCTAACGAAATACCTATTGCCTTGTACTTACGGAAT 14 29164658 0.697929763 3 10 92 0.818181818 0.77815125 0.045454545 0.428571429 0.636363636 14 2 2 18 3R:29164641-29164676 7 13.5 2156 FBgn0039644 385.6666667 9.473333333 14.69333333 0.035004322 1.42505278 0.918784029 2 6 4 0.25 dme-miR-304-5p 7mer-m8 TGAGATT 3R 29221864 29221870 + 3R_29221864_29221870_+ 0.609960236 0.610935663 0.610447949 0.000689783 Ef1gamma FBtr0085393|FBtr0085392|FBtr0302442 29221775|29221775|29221775 29222109|29222109|29222109 3R + 29221745 29222006 stop_codon Ef1gamma FlyBase G46701.1 GCAAGTTCAACCAGGGCAAGATCTTCAAGTAATCATCTCTGCCTAGCCCAGCTCCGCTCAAAGCAGCAGCCGCCCTCATTTAGACCAACAACAACAACAGCAGCAGTAACAATAAAGTTTGAGATTTAAAATGCAGGAAGAGCACAATGCCCATTTCTTAAGTTCCAACTGATAAGTACACTAAAGATATCCAATATCTGTCGTGCTGCCTCCCACGTTTGGCGGAATCGTGTGTCTCGCCTCCTGCATTTTGTACTGGAGA 65 29221863 0.975518867 26 57 360 0.871794872 1.054357662 0.205128205 0.169230769 0.307692308 65 5 5 68 3R:29221745-29222006 7 Ef1gamma FBtr0302442|FBtr0085392|FBtr0085393 29221775|29221775|29221775 29222109|29222109|29222109 TGAGATT 7mer-m8 dme-miR-304-5p 3R + 29221752 29221924 stop_codon Ef1gamma FlyBase G35225.1 CAACCAGGGCAAGATCTTCAAGTAATCATCTCTGCCTAGCCCAGCTCCGCTCAAAGCAGCAGCCGCCCTCATTTAGACCAACAACAACAACAGCAGCAGTAACAATAAAGTTTGAGATTTAAAATGCAGGAAGAGCACAATGCCCATTTCTTAAGTTCCAACTGATAAGTACA 32 29221863 0.97091587 13 29 168 0.954545455 1.62324929 0.295454545 0.375 0.545454545 32 2 0 42 3R:29221752-29221924 7 17 2157 FBgn0029176 8118.963333 592.2866667 901.75 0.002093863 0.028702318 0.018852232 1 1 1 0.25 dme-miR-283-5p 8mer-A1 TGATATTA 3R 29235069 29235076 + 3R_29235069_29235076_+ 0.534267043 0.443176457 0.48872175 0.06441071 CG15817 FBtr0300833|FBtr0333818|FBtr0300832 29233962|29233962|29233962 29235162|29235302|29235162 3R + 29235037 29235120 3'utr CG15817 FlyBase G46717.1 AGTTCTATTTTTTTCCAAGAGCGCTGCTATAGTGATATTAACATTTACAGAGCAAAGATTTGTGTACATTGTAATTTGTAAAGT 101 29235065 0.71315795 10 96 729 0.935483871 1.763427994 0.088709677 0.178217822 0.330645161 101 7 1 116 3R:29235037-29235120 8 CG15817 FBtr0300832|FBtr0333818|FBtr0300833 29233962|29233962|29233962 29235162|29235302|29235162 TGATATTA 8mer-A1 dme-miR-283-5p 3R + 29235037 29235128 3'utr CG15817 FlyBase G35239.1 AGTTCTATTTTTTTCCAAGAGCGCTGCTATAGTGATATTAACATTTACAGAGCAAAGATTTGTGTACATTGTAATTTGTAAAGTTTACATAT 62 29235097 0.961602065 12 62 458 1 1.986771734 0.12371134 0.338709677 0.577319588 62 0 0 97 3R:29235037-29235128 8 54 2158 FBgn0028476 401.67 10.06 15.48 0.134438718 5.367793241 3.488372093 4 -28 -12 0.25 dme-miR-317-3p 6mer2-7 GTGTTC 3R 29315599 29315604 - 3R_29315599_29315604_- 0.900591329 0.818179288 0.859385308 0.058274084 Cnx99A FBtr0085438|FBtr0334873|FBtr0085437 29315252|29315252|29315252 29315834|29315834|29315834 3R - 29315572 29315669 3'utr Cnx99A FlyBase G55596.1 ACACACTCGTTTCGGTTTAGTCAACTCTGTACGTACTTTTGCCGTATTATCGTTGCATTTCTGTCGTGTTCGACCCTCTGTCGTCCCCATATCTCCTA 17 29315590 0.672654886 12 14 148 0.842105263 0.726998728 0.052631579 0.117647059 0.210526316 17 1 2 16 3R:29315572-29315669 6 Cnx99A FBtr0085437|FBtr0085438|FBtr0334873 29315252|29315252|29315252 29315834|29315834|29315834 GTGTTC 6mer2-7 dme-miR-317-3p 3R - 29315576 29315671 3'utr Cnx99A FlyBase G41952.1 ACACACACTCGTTTCGGTTTAGTCAACTCTGTACGTACTTTTGCCGTATTATCGTTGCATTTCTGTCGTGTTCGACCCTCTGTCGTCCCCATATCT 11 29315590 0.986944929 9 10 95 0.947368421 1.255272505 0.105263158 0.545454545 0.736842105 11 1 0 18 3R:29315576-29315671 6 6.5 2159 FBgn0015622 4351.313333 201.68 309.1566667 0.001493802 0.032229274 0.021024939 -14 -14 -14 0.25 dme-miR-184-3p 7mer-m8 TCCGTCC 3R 29485121 29485127 + 3R_29485121_29485127_+ 0.660739129 0.661233894 0.660986511 0.000349876 Ptp99A FBtr0303148|FBtr0303454|FBtr0085422|FBtr0085424 29484488|29484488|29484488|29484488 29486704|29487131|29486704|29486704 3R + 29485107 29485145 5'utr Ptp99A FlyBase G46727.1 TCGAATCGATTCAGTCCGTCCTAGTATCTGTTATTCTTT 10 29485116 0.688481828 5 10 82 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 3R:29485107-29485145 7 Ptp99A FBtr0085422|FBtr0085424|FBtr0303148|FBtr0303454 29484488|29484488|29484488|29484488 29486704|29486704|29486704|29487131 TCCGTCC 7mer-m8 dme-miR-184-3p 3R + 29485106 29485142 5'utr Ptp99A FlyBase G35249.1 TTCGAATCGATTCAGTCCGTCCTAGTATCTGTTATTC 9 29485117 0.718774042 5 8 62 0.916666667 0.740362689 0.333333333 0.333333333 0.5 9 0 1 11 3R:29485106-29485142 7 9.5 2160 FBgn0004369 285.67 6.166666667 9.486666667 0.033255155 1.540540541 1.001405481 5 4 4.5 0.25 dme-miR-79-3p 7mer-m8 TAGCTTT 3R 29485312 29485318 - 3R_29485312_29485318_- 0.209439645 0.393429181 0.301434413 0.130100294 CG2321 FBtr0334339 29484781 29487140 3R - 29485260 29485364 3'utr CG2321 FlyBase G55610.1 TTTTCGTGATGCTCTTGTGCTTTGTGCGGAAATCGTGTGATTTACTTAGCTTTGATTGGGATTTACAGTGATGTGTGTGGTGTGGGTGGTGTAGAGTGCTCGGTA 10 29485320 0.988811525 8 9 94 0.9 0.653212514 0.3 0 0 10 0 1 9 3R:29485260-29485364 7 CG2321 FBtr0334339 29484781 29487140 TAGCTTT 7mer-m8 dme-miR-79-3p 3R - 29485262 29485355 3'utr CG2321 FlyBase G41959.1 TGCTCTTGTGCTTTGTGCGGAAATCGTGTGATTTACTTAGCTTTGATTGGGATTTACAGTGATGTGTGTGGTGTGGGTGGTGTAGAGTGCTCGG 15 29485321 0.989180221 7 14 129 1 1.230448921 0.764705882 0.133333333 0.235294118 15 0 0 17 3R:29485262-29485355 7 4.5 2161 FBgn0039663 234.51 8.906666667 13.64 0.019188947 0.505239521 0.329912023 2 3 2.5 0.25 dme-miR-33-5p 7mer-A1 AATGCAA 3R 29753170 29753176 + 3R_29753170_29753176_+ 0.766150107 0.745704887 0.755927497 0.01445694 yata FBtr0333822|FBtr0085477 29752956|29752956 29754528|29753328 3R + 29753116 29753202 3'utr yata FlyBase G46828.1 CATTTGGCCGCTCTGTGTGTGCTTTGTGTTTGTATTGGGTGCCAGTTTGCATTAAATGCAATCTCAGTGTCTCGAGCCTCCATTTCG 35 29753172 0.776217084 10 32 263 0.926829268 1.579783597 0.219512195 0.114285714 0.243902439 35 3 0 38 3R:29753116-29753202 7 yata FBtr0333822|FBtr0085477 29752956|29752956 29754528|29753328 AATGCAA 7mer-A1 dme-miR-33-5p 3R + 29753114 29753205 3'utr yata FlyBase G35323.1 CCCATTTGGCCGCTCTGTGTGTGCTTTGTGTTTGTATTGGGTGCCAGTTTGCATTAAATGCAATCTCAGTGTCTCGAGCCTCCATTTCGATT 23 29753183 0.979708004 14 23 185 1 1.505149978 0.25 0.304347826 0.5 23 0 0 32 3R:29753114-29753205 7 19.5 2162 FBgn0260990 1641.69 44.94333333 68.84666667 0.011878004 0.4338797 0.283238114 -2 -13 -7.5 0.25 dme-miR-1006-3p 6mer2-7 GAATTT 3R 29753657 29753662 + 3R_29753657_29753662_+ 0.995872577 0.999498112 0.997685345 0.002563616 yata FBtr0333822 29752956 29754528 3R + 29753567 29753674 3'utr yata FlyBase G46832.1 GATGCCAATCCACGCGATTTTCGAGGGACAGTGAATATTTAGAAATCTAAACTAAACGTATTTTTGCGAATGGAGCGTAACCAAAATTGTGAATTTTAATACATAAAT 99 29753653 0.98167078 12 98 719 0.991935484 2.089905111 0.072580645 0.191919192 0.35483871 99 1 0 123 3R:29753567-29753674 6 yata FBtr0333822 29752956 29754528 GAATTT 6mer2-7 dme-miR-1006-3p 3R + 29753569 29753674 3'utr yata FlyBase G35327.1 TGCCAATCCACGCGATTTTCGAGGGACAGTGAATATTTAGAAATCTAAACTAAACGTATTTTTGCGAATGGAGCGTAACCAAAATTGTGAATTTTAATACATAAAT 64 29753653 0.981141553 10 64 470 1 2.008600172 0.049019608 0.453125 0.656862745 64 0 0 102 3R:29753569-29753674 6 71 2163 FBgn0260990 1641.69 44.94333333 68.84666667 0.043248116 1.579767114 1.031277234 4 4 4 0.25 dme-miR-263a-5p 6mer3-8 GTGCCA 3R 29801065 29801070 + 3R_29801065_29801070_+ 0.422661012 0.763381733 0.593021373 0.240925917 Drice FBtr0085482 29800916 29801584 3R + 29801024 29801133 3'utr Drice FlyBase G46871.1 TACAACACTTTTTTAACCTGCCCAATTGCTCGACGAGATTGGTGCCACTGCCCGTTTTATTTTATTTAGGCACAAAGTATCTTTCGATTGACATTTATTAATGTCGCATT 80 29801072 0.850501341 19 72 566 0.948979592 1.968482949 0.112244898 0.1875 0.336734694 80 5 0 93 3R:29801024-29801133 6 Drice FBtr0085482 29800916 29801584 GTGCCA 6mer3-8 dme-miR-263a-5p 3R + 29800998 29801176 3'utr Drice FlyBase G35370.1 CTATCGGCCTTGCAGCATATTTTTTATACAACACTTTTTTAACCTGCCCAATTGCTCGACGAGATTGGTGCCACTGCCCGTTTTATTTTATTTAGGCACAAAGTATCTTTCGATTGACATTTATTAATGTCGCATTTACTCGTCTGTATTTATATTTTTTGGGGTGGGTAGAGTAGATC 63 29801066 0.985185707 29 58 477 0.92 1.486666573 0.2 0.444444444 0.65 63 6 2 92 3R:29800998-29801176 6 38 2164 FBgn0019972 801.2566667 50.41666667 76.82666667 0.047425502 0.753719008 0.494619924 -7 -1 -4 0.25 dme-miR-31a-5p 7mer-A1 CTTGCCA 3R 29801236 29801242 + 3R_29801236_29801242_+ 0.812029698 0.557316858 0.684673278 0.180109148 Drice FBtr0085482 29800916 29801584 3R + 29801185 29801364 3'utr Drice FlyBase G46872.1 TTAGAAATCTAAGAGGTTTTTACTCCGGCCAAAATTTTTTGACAATTTTAACTTGCCAACTGAACAAAGACGATCTCAAAATTTTAAATTCTCTACTAAACCTTATCATAGAACAACTTGCGCCTCTTTGATTCTCGATCAGGAATGTCGGCCCACCCTTATCTATATCTACCTTAGACC 203 29801245 0.899714444 33 181 1315 0.890688259 1.740362689 0.052631579 0.192118227 0.336032389 203 24 3 220 3R:29801185-29801364 7 Drice FBtr0085482 29800916 29801584 CTTGCCA 7mer-A1 dme-miR-31a-5p 3R + 29801187 29801348 3'utr Drice FlyBase G35371.1 AGAAATCTAAGAGGTTTTTACTCCGGCCAAAATTTTTTGACAATTTTAACTTGCCAACTGAACAAAGACGATCTCAAAATTTTAAATTCTCTACTAAACCTTATCATAGAACAACTTGCGCCTCTTTGATTCTCGATCAGGAATGTCGGCCCACCCTTATCT 171 29801245 0.843688429 31 151 1063 0.891050584 1.514737442 0.038910506 0.374269006 0.583657588 171 22 6 229 3R:29801187-29801348 7 52 2165 FBgn0019972 801.2566667 50.41666667 76.82666667 0.064898056 1.031404959 0.676848317 -9 -9 -9 0.25 dme-miR-33-5p 7mer-m1 AATGCAC 3R 29801526 29801532 + 3R_29801526_29801532_+ 0.822688303 0.815018625 0.818853464 0.005423297 Drice FBtr0085482 29800916 29801584 3R + 29801494 29801580 3'utr Drice FlyBase G46874.1 ATACTATTTCTATGCCATTTGTACTCTTATATAATGCACATTAGCAAATGTTCTCCTTTCAAGTTAACCGCTAATAAATCCGATTGA 17 29801542 0.987907305 11 17 153 1 1.342422681 0 0.235294118 0.409090909 17 0 0 22 3R:29801494-29801580 7 Drice FBtr0085482 29800916 29801584 AATGCAC 7mer-m1 dme-miR-33-5p 3R + 29801528 29801581 3'utr Drice FlyBase G35374.1 TGCACATTAGCAAATGTTCTCCTTTCAAGTTAACCGCTAATAAATCCGATTGAA 6 29801542 0.979483929 5 6 41 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3R:29801528-29801581 4 3 2166 FBgn0019972 801.2566667 50.41666667 76.82666667 0.003744119 0.059504132 0.039048941 -16 -16 -16 0.25 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 29804321 29804326 - 3R_29804321_29804326_- 0.918265755 0.961626652 0.939946203 0.030660786 ncd FBtr0344976|FBtr0085534 29804288|29804288 29804405|29804405 3R - 29804291 29804362 3'utr ncd FlyBase G55721.1 ACCTGTTATTGCTTAATTTATGTGTGTTTACTTTTAGTGCAAATAAACTAATAAAGTGCTGGAATTCAAAGC 15 29804328 0.989524394 6 15 145 1 1.278753601 0.368421053 0.266666667 0.421052632 15 0 0 19 3R:29804291-29804362 6 ncd FBtr0344976|FBtr0085534 29804288|29804288 29804405|29804405 GTGCAA 6mer3-8 dme-miR-92b-3p 3R - 29804294 29804352 3'utr ncd FlyBase G42042.1 GCTTAATTTATGTGTGTTTACTTTTAGTGCAAATAAACTAATAAAGTGCTGGAATTCAA 9 29804329 0.989776452 5 8 77 1 1.230448921 0.470588235 0.333333333 0.647058824 9 0 0 17 3R:29804294-29804352 6 9.5 2167 FBgn0002924 2335.956667 120.6666667 184.3066667 0.004066856 0.078729282 0.051544527 2 3 2.5 0.25 dme-miR-965-3p 7mer-A1 ACGCTTA 3R 29827492 29827498 - 3R_29827492_29827498_- 0.783302527 0.816661445 0.799981986 0.023588304 Atg16 FBtr0339144|FBtr0085528|FBtr0085529|FBtr0085530 29827279|29827279|29827279|29827279 29827559|29827559|29827559|29827559 3R - 29827417 29827536 3'utr Atg16 FlyBase G55743.2 CTCGAGCCAGTCGGATGCAATCCAATTCCGAAACTGAAACGCTTAAGAAGTCAGAGCAGTGCTGCAATCTGCTGTACATAGTAAATTCGGTCGACGTTTTAACAACTTTACTTGATTATT 30 29827511 0.855641554 10 27 154 0.918918919 1.531478917 0.189189189 0.2 0.351351351 30 3 0 34 3R:29827417-29827536 7 Atg16 FBtr0085530|FBtr0085529|FBtr0085528|FBtr0339144 29827279|29827279|29827279|29827279 29827559|29827559|29827559|29827559 ACGCTTA 7mer-A1 dme-miR-965-3p 3R - 29827456 29827535 3'utr Atg16 FlyBase G42060.2 TCGAGCCAGTCGGATGCAATCCAATTCCGAAACTGAAACGCTTAAGAAGTCAGAGCAGTGCTGCAATCTGCTGTACATAG 19 29827511 0.811113343 9 14 70 0.8 1.301029996 0.08 0.315789474 0.48 19 5 0 20 3R:29827456-29827535 7 9 2168 FBgn0039705 890.6666667 49.85333333 76.6 0.01010479 0.180529553 0.117493473 13 13 13 0.25 dme-miR-1012-3p 6mer3-8 TTGACT 3R 29874914 29874919 + 3R_29874914_29874919_+ 0.982804046 0.979583129 0.981193587 0.00227752 CG34133 FBtr0301073|FBtr0335004 29874565|29874565 29875159|29875159 3R + 29874872 29874941 3'utr CG34133 FlyBase G46948.1 CGAAAGTCAATTGTATATTGTTATGCCCTTGTAAGTTACATTTTGACTGTACAGATGCTTTGATTTCGTT 21 29874931 0.689624384 11 20 200 0.958333333 1.361727836 0.416666667 0.095238095 0.208333333 21 1 0 23 3R:29874872-29874941 6 CG34133 FBtr0335004|FBtr0301073 29874565|29874565 29875159|29875159 TTGACT 6mer3-8 dme-miR-1012-3p 3R + 29874868 29874941 3'utr CG34133 FlyBase G35429.1 ATTTCGAAAGTCAATTGTATATTGTTATGCCCTTGTAAGTTACATTTTGACTGTACAGATGCTTTGATTTCGTT 10 29874931 0.99052473 6 10 104 1 1.146128036 0.214285714 0.4 0.571428571 10 0 0 14 3R:29874868-29874941 6 12 2169 FBgn0083969 922.7466667 26.26 40.29 0.013004653 0.456968774 0.297840655 -17 -17 -17 0.25 dme-bantam-3p 6mer3-8 TGATCT 3R 29902981 29902986 + 3R_29902981_29902986_+ 0.92508011 0.898520812 0.911800461 0.018780261 CG31038 FBtr0085494|FBtr0333274|FBtr0333275|FBtr0085497|FBtr0085498 29902590|29902590|29902590|29902590|29902590 29903231|29903231|29903231|29903231|29903231 3R + 29902953 29903000 3'utr CG31038 FlyBase G46952.1 ACCAGCCTCTGTGGTTAGGAGTCCTTTGTGATCTTCAGTTGTAAGTTT 14 29902986 0.961245604 5 11 140 0.785714286 0.740362689 0.285714286 0 0 14 2 1 11 3R:29902953-29903000 6 CG31038 FBtr0085494|FBtr0085498|FBtr0085497|FBtr0333275|FBtr0333274 29902590|29902590|29902590|29902590|29902590 29903231|29903231|29903231|29903231|29903231 TGATCT 6mer3-8 dme-bantam-3p 3R + 29902955 29903000 3'utr CG31038 FlyBase G35432.1 CAGCCTCTGTGGTTAGGAGTCCTTTGTGATCTTCAGTTGTAAGTTT 13 29902978 0.659194469 4 13 151 1 1.301029996 0.1 0.384615385 0.6 13 0 0 20 3R:29902955-29903000 6 13 2170 FBgn0051038 142.6666667 4.59 7.016666667 0.091121495 2.832244009 1.852731591 -5 3 -1 0.25 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 30016092 30016099 - 3R_30016092_30016099_- 0.618195404 0.62827301 0.623234207 0.007125939 Mgat2 FBtr0334705|FBtr0085602|FBtr0100418 30015511|30015511|30015511 30016371|30016371|30016371 3R - 30016063 30016117 3'utr Mgat2 FlyBase G55839.1 TCATACTATAAGTAACCCTCTAGTCACACATTCAATTGGAATCGCCGTGTTGTTG 42 30016099 0.726505363 8 37 207 0.884615385 1.185636577 0 0.19047619 0.346153846 42 4 2 46 3R:30016063-30016117 8 Mgat2 FBtr0100418|FBtr0085602|FBtr0334705 30015511|30015511|30015511 30016371|30016371|30016371 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R - 30016053 30016115 3'utr Mgat2 FlyBase G42129.1 ATACTATAAGTAACCCTCTAGTCACACATTCAATTGGAATCGCCGTGTTGTTGCAACCTCCAA 32 30016099 0.827681364 8 30 139 0.941176471 1.681241237 0 0.40625 0.62745098 32 3 0 48 3R:30016053-30016115 8 32.5 2171 FBgn0039738 328.6966667 12.42333333 18.86666667 0.098875356 2.616045076 1.722614841 0 0 0 0.25 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 30042986 30042992 + 3R_30042986_30042992_+ 0.457334889 0.552459709 0.504897299 0.067263391 Sry-alpha FBtr0085557|FBtr0346862 30042853|30042853 30043071|30043071 3R + 30042965 30042998 3'utr Sry-alpha FlyBase G47010.1 TAATTAGCTACCTAAGTCAATTGTGTTCTTTACA 22 30042985 0.801680176 2 22 228 1 1.361727836 0 0.045454545 0.086956522 22 0 0 23 3R:30042965-30042998 7 Sry-alpha FBtr0346862|FBtr0085557 30042853|30042853 30043071|30043071 TGTGTTC 7mer-m8 dme-miR-317-3p 3R + 30042965 30042997 3'utr Sry-alpha FlyBase G35473.1 TAATTAGCTACCTAAGTCAATTGTGTTCTTTAC 7 30042985 0.794980966 2 7 77 1 1.176091259 0 0.714285714 0.866666667 7 0 0 15 3R:30042965-30042997 7 14.5 2172 FBgn0003510 16.33666667 1.003333333 1.446666667 0.887573964 14.45182724 10.02304147 1 1 1 0.25 dme-miR-252-5p 6mer3-8 GTACTT 3R 30044839 30044844 + 3R_30044839_30044844_+ 0.957980006 0.949051708 0.953515857 0.006313261 Sry-delta FBtr0085558 30044779 30044886 3R + 30044818 30044868 3'utr Sry-delta FlyBase G47019.1 CTAGTGTATTTCCTCCTCTTTGTACTTGATTATTGTAGATTCCTACAAAAT 84 30044838 0.783664992 10 84 1163 1 1.982271233 0.052083333 0.130952381 0.239583333 84 0 0 96 3R:30044818-30044868 6 Sry-delta FBtr0085558 30044779 30044886 GTACTT 6mer3-8 dme-miR-252-5p 3R + 30044802 30044859 3'utr Sry-delta FlyBase G35479.1 AATTGTTTATCTTTCCCTAGTGTATTTCCTCCTCTTTGTACTTGATTATTGTAGATTC 58 30044838 0.994172369 6 58 754 1 1.913813852 0.024390244 0.344827586 0.536585366 58 0 0 82 3R:30044802-30044859 6 70 2173 FBgn0003512 609.7433333 48.67 74.76 0.114802403 1.438257654 0.936329588 1 1 1 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3R 30048581 30048587 + 3R_30048581_30048587_+ 0.505912526 0.513318363 0.509615444 0.005236762 CG7943 FBtr0085560|FBtr0085559 30048217|30048217 30048665|30048665 3R + 30048565 30048646 3'utr CG7943 FlyBase G47026.1 TGTTCGCCAATAACTTTGTGATTGATTGAAGATACTACAACTGATTAATTAACGCGGTAGATTCAATGTTCTTAAACGAAAA 131 30048580 0.754764705 8 123 1114 0.957575758 1.596597096 0.254545455 0.213740458 0.375757576 131 4 3 158 3R:30048565-30048646 7 CG7943 FBtr0085560|FBtr0085559 30048217|30048217 30048665|30048665 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 30048565 30048607 3'utr CG7943 FlyBase G35484.1 TGTTCGCCAATAACTTTGTGATTGATTGAAGATACTACAACTG 84 30048580 0.707214988 6 81 699 0.968992248 2.096910013 0.333333333 0.345238095 0.573643411 84 4 0 125 3R:30048565-30048607 7 103 2174 FBgn0039741 255.38 18.77666667 28.61666667 0.403320542 5.485531688 3.599301107 1 1 1 0.25 dme-miR-305-5p 7mer-A1 GTACAAA 3R 30057972 30057978 + 3R_30057972_30057978_+ 0.742713961 0.760946434 0.751830197 0.012892254 CG7950 FBtr0085563|FBtr0085564 30057934|30057934 30058131|30058131 3R + 30057955 30057983 3'utr CG7950 FlyBase G47036.1 GAGCTAGGTGTGACTTCGTACAAAATAAA 6 30057970 0.717180945 2 6 31 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 3R:30057955-30057983 7 CG7950 FBtr0085563|FBtr0085564 30057934|30057934 30058131|30058131 GTACAAA 7mer-A1 dme-miR-305-5p 3R + 30057955 30057988 3'utr CG7950 FlyBase G35489.1 GAGCTAGGTGTGACTTCGTACAAAATAAATAAAA 17 30057970 0.712796543 4 15 99 0.913043478 1.322219295 0 0.235294118 0.434782609 17 2 0 21 3R:30057955-30057988 7 11.5 2175 FBgn0260468 214.1466667 22.56333333 34.67333333 0.053701513 0.509676466 0.331666987 2 2 2 0.25 dme-miR-34-5p 6mer2-7 ACTGCC 3R 30121077 30121082 + 3R_30121077_30121082_+ 0.991458344 0.998199484 0.994828914 0.004766748 sima FBtr0344376|FBtr0344374|FBtr0344373|FBtr0344375 30120757|30120757|30120757|30120149 30121798|30121798|30121798|30121798 3R + 30121059 30121095 3'utr sima FlyBase G47060.1 AGTTTTGTAGCCATGTTAACTGCCTAGAACAGAAGAA 19 30121083 0.956777077 5 17 115 0.904761905 1.278753601 0.19047619 0.105263158 0.19047619 19 2 0 19 3R:30121059-30121095 6 sima FBtr0344376|FBtr0344374|FBtr0344373|FBtr0344375 30120757|30120757|30120757|30120149 30121798|30121798|30121798|30121798 ACTGCC 6mer2-7 dme-miR-34-5p 3R + 30121057 30121124 3'utr sima FlyBase G35504.1 ATAGTTTTGTAGCCATGTTAACTGCCTAGAACAGAAGAATATACACGTATGTAATTTAGTCTTAATGT 17 30121083 0.976756264 6 15 106 0.956521739 1.342422681 0.391304348 0.176470588 0.391304348 17 1 0 22 3R:30121057-30121124 6 17 2176 FBgn0266411 1469.71 34.50666667 52.49333333 0.011566908 0.492658423 0.323850648 -6 -6 -6 0.25 dme-miR-12-5p 7mer-A1 ATACTCA 3R 30213387 30213393 - 3R_30213387_30213393_- 0.819669151 0.821524678 0.820596914 0.001312037 CecB FBtr0085640 30213313 30213475 3R - 30213368 30213404 3'utr CecB FlyBase G55877.1 AATGAAAATAGATACTCAATGCCAATGTCAAATTATT 8 30213385 0.946256182 4 8 34 1 1.146128036 0.071428571 0.375 0.642857143 8 0 0 14 3R:30213368-30213404 7 CecB FBtr0085640 30213313 30213475 ATACTCA 7mer-A1 dme-miR-12-5p 3R - 30213366 30213404 3'utr CecB FlyBase G42159.1 AATGAAAATAGATACTCAATGCCAATGTCAAATTATTAA 11 30213396 0.891514199 4 11 55 1 1.176091259 0 0.272727273 0.466666667 11 0 0 15 3R:30213366-30213404 7 9.5 2177 FBgn0000278 26.33333333 8.696666667 13.18 0.360759494 1.092372557 0.720789074 -8 3 -2.5 0.25 dme-miR-1008-3p 6mer2-7 GCTGTG 3R 30362338 30362343 + 3R_30362338_30362343_+ 0.993303666 0.854393095 0.923848381 0.098224627 hdc FBtr0330311 30360539 30372382 3R + 30362321 30362409 3'utr hdc FlyBase G47092.1 AACAAATCATGATAATTGCTGTGCTGCTCAATAACACAAAAAATCATTAAAATAAAAGGAGAAGGAGTAGAGTAGGAGAGTAAAACAGG 22 30362337 0.973597643 10 19 105 0.88 1.041392685 0.12 0.136363636 0.24 22 2 1 22 3R:30362321-30362409 6 hdc FBtr0330311 30360539 30372382 GCTGTG 6mer2-7 dme-miR-1008-3p 3R + 30362254 30362379 3'utr hdc FlyBase G35523.1 ATTTACATCACGATTGAGGGAAAAGTTTTATTTAGCAAAAATTGAAGGCAGGGCATTAAATTGTTTAAACAAATCATGATAATTGCTGTGCTGCTCAATAACACAAAAAATCATTAAAATAAAAGG 24 30362336 0.974045984 11 21 134 0.911764706 1.491361694 0.088235294 0.375 0.558823529 24 3 0 31 3R:30362254-30362379 6 11 2178 FBgn0010113 3260.306667 58.23333333 89.73 0.003373916 0.188895249 0.122589992 1 2 1.5 0.25 dme-bantam-3p 6mer2-7 GATCTC 3R 30362933 30362938 + 3R_30362933_30362938_+ 0.820178281 0.659234535 0.739706408 0.113804452 hdc FBtr0330311 30360539 30372382 3R + 30362847 30362998 3'utr hdc FlyBase G47095.1 AGTCTAAGTGTTAGGTTATAGCGATCTTCTTGTATATGTCTAGGGTTCTTCTCTTTGTCTAAATAGCAGAGCAGCCGTATGTGATGGATCTCTAAAGGTAGAGTGAGGACCCCGCAGGTGCGAGCAAACCACATGCAGGCACTCACTATCGA 375 30362939 0.939350247 27 334 2464 0.913242009 1.488116639 0.351598174 0.149333333 0.271689498 375 26 12 400 3R:30362847-30362998 6 hdc FBtr0330311 30360539 30372382 GATCTC 6mer2-7 dme-bantam-3p 3R + 30362842 30362994 3'utr hdc FlyBase G35525.1 TATTAAGTCTAAGTGTTAGGTTATAGCGATCTTCTTGTATATGTCTAGGGTTCTTCTCTTTGTCTAAATAGCAGAGCAGCCGTATGTGATGGATCTCTAAAGGTAGAGTGAGGACCCCGCAGGTGCGAGCAAACCACATGCAGGCACTCACTA 297 30362939 0.794945248 26 269 2013 0.907756813 1.335457901 0.381551363 0.420875421 0.639412998 297 25 19 433 3R:30362842-30362994 6 224.5 2179 FBgn0010113 3260.306667 58.23333333 89.73 0.068858553 3.855180309 2.501950295 -6 -6 -6 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 30363285 30363290 + 3R_30363285_30363290_+ 0.996277726 0.828464462 0.912371094 0.118661852 hdc FBtr0330311|FBtr0330311|FBtr0330311 30360539|30360539|30360539 30372382|30372382|30372382 3R + 30363269 30363300 3'utr hdc FlyBase G47097.1 AAAATAACTTTCCCGTCTGTGAAATTTTTAAT 10 30363283 0.635331799 7 9 88 0.818181818 0.954242509 0.090909091 0.1 0.181818182 10 2 0 9 3R:30363269-30363300 6 hdc FBtr0330311|FBtr0330311|FBtr0330311 30360539|30360539|30360539 30372382|30372382|30372382 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 30363273 30363294 3'utr hdc FlyBase G35528.1 TAACTTTCCCGTCTGTGAAATT 5 30363284 0.744774703 2 5 37 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:30363273-30363294 6 7 2180 FBgn0010113 3260.306667 58.23333333 89.73 0.002147037 0.120206068 0.078011813 2 1 1.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 30364315 30364320 + 3R_30364315_30364320_+ 0.991412199 0.750864078 0.871138138 0.170093193 hdc FBtr0330311|FBtr0330311|FBtr0330311 30360539|30360539|30360539 30372382|30372382|30372382 3R + 30364296 30364336 3'utr hdc FlyBase G47104.1 GAAAAACCTCCTCGAATAACTGTGAAATCCCCTTCCTTAGA 78 30364323 0.788175108 6 70 525 0.898876404 1.903089987 0.02247191 0.102564103 0.213483146 78 9 0 80 3R:30364296-30364336 6 hdc FBtr0330311|FBtr0330311|FBtr0330311 30360539|30360539|30360539 30372382|30372382|30372382 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 30364294 30364333 3'utr hdc FlyBase G35534.1 TTGAAAAACCTCCTCGAATAACTGTGAAATCCCCTTCCTT 38 30364323 0.827664009 5 35 241 0.947368421 1.431363764 0 0.368421053 0.578947368 38 2 1 54 3R:30364294-30364333 6 58 2181 FBgn0010113 3260.306667 58.23333333 89.73 0.017789738 0.995993131 0.646383595 -8 -8 -8 0.25 dme-miR-277-3p 7mer-A1 GCATTTA 3R 30364756 30364762 + 3R_30364756_30364762_+ 0.823347746 0.823345336 0.823346541 1.70E-06 hdc FBtr0330311 30360539 30372382 3R + 30364673 30364803 3'utr hdc FlyBase G47106.1 AAGTACATACCCTATACCATATACCCTATACCGTATAAAACGTACACCTAACTAACCTAAATTGATAGAAACTACACTTTTTGGCATTTACTTGAGAGGATTATATATAAGTTTGGCACAGTTATATATAA 68 30364759 0.976689973 16 59 624 0.85 1.531478917 0.2875 0.132352941 0.2625 68 11 1 68 3R:30364673-30364803 7 hdc FBtr0330311 30360539 30372382 GCATTTA 7mer-A1 dme-miR-277-3p 3R + 30364705 30364785 3'utr hdc FlyBase G35537.1 GTATAAAACGTACACCTAACTAACCTAAATTGATAGAAACTACACTTTTTGGCATTTACTTGAGAGGATTATATATAAGTT 30 30364760 0.994444207 11 20 263 0.708333333 1.054357662 0.291666667 0.566666667 0.729166667 30 12 2 34 3R:30364705-30364785 7 34.5 2182 FBgn0010113 3260.306667 58.23333333 89.73 0.010581827 0.59244419 0.384486794 -3 -4 -3.5 0.25 dme-bantam-3p 6mer3-8 TGATCT 3R 30365656 30365661 + 3R_30365656_30365661_+ 0.998884996 0.762823251 0.880854123 0.166920829 hdc FBtr0330311 30360539 30372382 3R + 30365639 30365687 3'utr hdc FlyBase G47111.1 CCTTTTGAATCTTTTCGTGATCTTCAGTTACTGAAACATGCCAAAATCC 10 30365652 0.84015546 6 9 79 0.909090909 0.698970004 0.090909091 0.1 0.181818182 10 0 1 10 3R:30365639-30365687 6 hdc FBtr0330311 30360539 30372382 TGATCT 6mer3-8 dme-bantam-3p 3R + 30365599 30365687 3'utr hdc FlyBase G35542.1 ATATTTTATGTTCAACAAATGAAATATTTGCGCGCCTTTCCCTTTTGAATCTTTTCGTGATCTTCAGTTACTGAAACATGCCAAAATCC 12 30365655 0.990645419 8 12 112 1 1.204119983 0.0625 0.333333333 0.5 12 0 0 16 3R:30365599-30365687 6 8 2183 FBgn0010113 3260.306667 58.23333333 89.73 0.002453757 0.137378363 0.089156358 4 1 2.5 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 30366074 30366079 + 3R_30366074_30366079_+ 0.940758465 0.977671582 0.959215024 0.026101503 hdc FBtr0330311 30360539 30372382 3R + 30366051 30366103 3'utr hdc FlyBase G47114.1 AATGTGTAATATATGTATACTTTGTACCTTTTTATGTTATACACAAGTCCCCA 79 30366081 0.903100435 10 75 978 0.970588235 1.995635195 0.098039216 0.227848101 0.401960784 79 3 0 99 3R:30366051-30366103 6 hdc FBtr0330311 30360539 30372382 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 30366045 30366095 3'utr hdc FlyBase G35544.1 ATTCGTAATGTGTAATATATGTATACTTTGTACCTTTTTATGTTATACACA 65 30366081 0.827728355 9 65 833 1 1.954242509 0.233333333 0.307692308 0.5 65 0 0 90 3R:30366045-30366095 6 71.5 2184 FBgn0010113 3260.306667 58.23333333 89.73 0.021930452 1.227819118 0.796834949 -7 -7 -7 0.25 dme-miR-283-5p 8mer-m1 TGATATTT 3R 30368998 30369005 + 3R_30368998_30369005_+ 0.500273481 0.476646311 0.488459896 0.016706953 hdc FBtr0330311 30360539 30372382 3R + 30368980 30369017 3'utr hdc FlyBase G47119.1 AAAGAGCTCCCCGATATGTGATATTTAATTGGTAATTG 14 30368994 0.800616335 4 14 110 1 1.230448921 0.058823529 0.214285714 0.352941176 14 0 0 17 3R:30368980-30369017 8 hdc FBtr0330311 30360539 30372382 TGATATTT 8mer-m1 dme-miR-283-5p 3R + 30368982 30369005 3'utr hdc FlyBase G35546.1 AGAGCTCCCCGATATGTGATATTT 5 30368994 0.81224685 2 5 35 1 0.84509804 0 0.4 0.571428571 5 0 0 7 3R:30368982-30369005 8 9.5 2185 FBgn0010113 3260.306667 58.23333333 89.73 0.002913836 0.163136806 0.105873175 4 4 4 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3R 30385761 30385767 - 3R_30385761_30385767_- 0.361066989 0.34650565 0.35378632 0.010296394 Fer1HCH FBtr0085635 30385571 30386297 3R - 30385639 30385793 3'utr Fer1HCH FlyBase G55884.2 ACGTCTGTTCTTTCTTATCAACCACTTGTGATTTCCGTACACCTCGGGAGGGGGCTCCACATTATGCAATCGCCGAGATTTCGCCTAGGCTTAAGTGGAATCGCTCATTCGCATAGTAAGACACTCAGCACAACCCATTCAATACATCCTATATC 411 30385761 0.830147327 27 377 2895 0.915662651 1.579783597 0.06626506 0.175182482 0.319277108 411 31 11 456 3R:30385639-30385793 7 Fer1HCH FBtr0085631|FBtr0085634|FBtr0306588|FBtr0085635|FBtr0085633|FBtr0085632 30385571|30385571|30385571|30385571|30385571|30385571 30385983|30385983|30385983|30386297|30385983|30385983 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 30385655 30385863 NoAnnotation G42166.1 AGCCAAGTCGGCGACTGGCCAATAAATTATCCGTTCGACTGCGATCCTCAAACCAGCACAGCAAAATTCCACGTCTGTTCTTTCTTATCAACCACTTGTGATTTCCGTACACCTCGGGAGGGGGCTCCACATTATGCAATCGCCGAGATTTCGCCTAGGCTTAAGTGGAATCGCTCATTCGCATAGTAAGACACTCAGCACAACCCATT 289 30385761 0.969122581 39 278 1979 0.968609865 2.334453751 0.047085202 0.401384083 0.612107623 289 13 1 432 3R:30385655-30385863 7 223.5 2186 FBgn0015222 3048.623333 308.1333333 465.1 0.073311779 0.725335353 0.480541819 -6 -6 -6 0.25 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 3R 30386109 30386115 - 3R_30386109_30386115_- 0.820551853 0.800782247 0.81066705 0.013979289 Fer1HCH FBtr0085635 30385571 30386297 3R - 30386085 30386144 5'utr Fer1HCH FlyBase G55885.1 AGCCCTACAACCACTACCACCTGGTGGACTACCTGACCGGTGTCTATCTGGAGGAGCAGC 16 30386121 0.958667426 6 15 75 0.947368421 1.255272505 0 0.1875 0.315789474 16 1 0 18 3R:30386085-30386144 7 Fer1HCH FBtr0085635 30385571 30386297 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R - 30386073 30386148 5'utr Fer1HCH FlyBase G42167.1 AACAAGCCCTACAACCACTACCACCTGGTGGACTACCTGACCGGTGTCTATCTGGAGGAGCAGCTCCACGGACAGC 10 30386119 0.934152345 6 8 41 0.789473684 1.176091259 0 0.4 0.684210526 10 4 0 15 3R:30386073-30386148 7 11 2187 FBgn0015222 3048.623333 308.1333333 465.1 0.003608186 0.035698832 0.023650828 6 4 5 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3R 30456795 30456801 - 3R_30456795_30456801_- 0.441720843 0.442889931 0.442305387 0.000826679 CG2224 FBtr0331358 30456439 30457058 3R - 30456787 30456852 3'utr CG2224 FlyBase G55921.1 TTGCGTTCCGGCCTCTTGGTTCGTTGCATTCTTTCACTTAAGAACCTCTAATGTGATTTTCAATTG 37 30456795 0.826107322 10 37 283 1 1.73239376 0.111111111 0.378378378 0.574074074 37 0 0 54 3R:30456787-30456852 7 CG2224 FBtr0331358 30456439 30457058 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 30456765 30456857 3'utr CG2224 FlyBase G42194.1 GTTTATTGCGTTCCGGCCTCTTGGTTCGTTGCATTCTTTCACTTAAGAACCTCTAATGTGATTTTCAATTGTGGCTTACCCTTGCGTTCGTTA 31 30456795 0.98484663 13 29 239 0.875 1.243038049 0.15 0.225806452 0.4 31 4 1 35 3R:30456765-30456857 7 28.5 2188 FBgn0039773 322.3166667 18.33333333 28.13666667 0.088422359 1.554545455 1.012913162 -6 -6 -6 0.25 dme-miR-8-3p 6mer2-7 AGTATT 3R 30786939 30786944 + 3R_30786939_30786944_+ 0.760588278 0.964034018 0.862311148 0.143857834 zfh1 FBtr0331180|FBtr0085701|FBtr0085702 30786658|30786202|30786202 30789202|30789202|30787177 3R + 30786835 30787005 3'utr zfh1 FlyBase G47226.1 TTTTTTATAGCCATATAGACAGGGGAAATGTAAGAAGCCGTAGTTGAAAACCTTTCGTTTGAGCGAATTTATTATTTTTACAATGTTGCAACCACTTTGTTCTTAGTATTTTATTAGTTTAGCTTAACTTAGCTTACCGCCTAAGTTCGAGCGCAGGGCTGAATCATTTTG 139 30786937 0.929754304 33 134 1188 0.964497041 1.911157609 0.272189349 0.18705036 0.331360947 139 5 1 163 3R:30786835-30787005 6 zfh1 FBtr0331180|FBtr0085701|FBtr0085702 30786658|30786202|30786202 30789202|30789202|30787177 AGTATT 6mer2-7 dme-miR-8-3p 3R + 30786834 30787013 3'utr zfh1 FlyBase G35628.1 ATTTTTTATAGCCATATAGACAGGGGAAATGTAAGAAGCCGTAGTTGAAAACCTTTCGTTTGAGCGAATTTATTATTTTTACAATGTTGCAACCACTTTGTTCTTAGTATTTTATTAGTTTAGCTTAACTTAGCTTACCGCCTAAGTTCGAGCGCAGGGCTGAATCATTTTGTTTGGCCC 97 30786937 0.989411513 27 87 860 0.919708029 1.401400541 0.328467153 0.288659794 0.496350365 97 7 4 126 3R:30786834-30787013 6 61.5 2189 FBgn0004606 2785.276667 51.94333333 79.77333333 0.022080392 1.183982545 0.770934314 2 2 2 0.25 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3R 30788299 30788305 + 3R_30788299_30788305_+ 0.651554334 0.668087162 0.659820748 0.011690526 zfh1 FBtr0331180|FBtr0331180|FBtr0085701|FBtr0085701 30786658|30786658|30786202|30786202 30789202|30789202|30789202|30789202 3R + 30788263 30788373 3'utr zfh1 FlyBase G47237.1 CGAGAGGAAGAAAAACTCACAAAAAAATGCATTTAATACTTAATTAGTTTTTATATTCTTGTATTTTAACGAGGAGGAGGCCGATCGGCGGCGATATATATATATATATAT 61 30788295 0.985373517 15 50 420 0.847222222 1.484299839 0.125 0.163934426 0.291666667 61 10 1 61 3R:30788263-30788373 7 zfh1 FBtr0331180|FBtr0331180|FBtr0085701|FBtr0085701 30786658|30786658|30786202|30786202 30789202|30789202|30789202|30789202 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3R + 30788272 30788346 3'utr zfh1 FlyBase G35635.1 GAAAAACTCACAAAAAAATGCATTTAATACTTAATTAGTTTTTATATTCTTGTATTTTAACGAGGAGGAGGCCGA 20 30788293 0.985168379 9 17 134 0.954545455 1.322219295 0 0.157894737 0.272727273 19 1 0 21 3R:30788272-30788346 7 21 2190 FBgn0004606 2785.276667 51.94333333 79.77333333 0.007539646 0.404286723 0.263245863 4 6 5 0.25 dme-miR-317-3p 8mer-A1 TGTGTTCA 3R 31055508 31055515 - 3R_31055508_31055515_- 0.631136779 0.630994939 0.631065859 0.000100338 dco FBtr0085743|FBtr0085742|FBtr0085744|FBtr0334548 31055184|31055184|31055184|31054083 31056528|31056528|31056528|31056528 3R - 31055502 31055540 3'utr dco FlyBase G55992.1 CTTTCGTGGTCTGCACTTTGCTGCCTGTGTTCATATATA 6 31055524 0.981246061 4 4 44 0.875 0.84509804 0.125 0.166666667 0.375 6 1 0 7 3R:31055502-31055540 8 dco FBtr0085744|FBtr0334548|FBtr0085743|FBtr0085742 31055184|31054083|31055184|31055184 31056528|31056528|31056528|31056528 TGTGTTCA 8mer-A1 dme-miR-317-3p 3R - 31055505 31055541 3'utr dco FlyBase G42254.1 ACTTTCGTGGTCTGCACTTTGCTGCCTGTGTTCATAT 7 31055525 0.755162635 4 5 55 0.75 0.77815125 0 0.142857143 0.25 7 2 0 6 3R:31055505-31055541 8 3.5 2191 FBgn0002413 1939.763333 65.62333333 100.4966667 0.001804344 0.053334688 0.034827026 9 10 9.5 0.25 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 31055692 31055699 - 3R_31055692_31055699_- 0.618545228 0.625351165 0.621948197 0.004812569 dco FBtr0085743|FBtr0085742|FBtr0085744|FBtr0334548 31055184|31055184|31055184|31054083 31056528|31056528|31056528|31056528 3R - 31055624 31055748 3'utr dco FlyBase G55993.1 GTAACCTAAGTTGATGGTAAAATGATTGCGATTACCACGTGCAGTTCTCTAGCTTTAAGCAACGCTCTGACTTATAAGGCCCTCCTATGTTATATTATGTAACCTTCTGTACCGCCTACTCCCCT 59 31055709 0.90956727 18 53 479 0.910447761 1.30820858 0.313432836 0.101694915 0.208955224 59 4 2 61 3R:31055624-31055748 8 dco FBtr0085744|FBtr0334548|FBtr0085743|FBtr0085742 31055184|31054083|31055184|31055184 31056528|31056528|31056528|31056528 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R - 31055658 31055813 3'utr dco FlyBase G42255.1 AGGCTCTAGCTCTAGCGAATCCAATCCATACAAAAGCATATGCCACACAGCAAGGCACCCACATTGTAACCTAAGTTGATGGTAAAATGATTGCGATTACCACGTGCAGTTCTCTAGCTTTAAGCAACGCTCTGACTTATAAGGCCCTCCTATGTT 35 31055709 0.981664305 15 32 233 0.964285714 1.255272505 0.285714286 0.485714286 0.678571429 35 0 2 54 3R:31055658-31055813 8 32 2192 FBgn0002413 1939.763333 65.62333333 100.4966667 0.016496858 0.487631432 0.318418521 10 10 10 0.25 dme-miR-14-3p 6mer2-7 AGACTG 3R 31228017 31228022 + 3R_31228017_31228022_+ 0.996909939 0.999108025 0.998008982 0.001554291 CG12054 FBtr0085758 31227841 31228491 3R + 31227902 31228062 3'utr CG12054 FlyBase G47283.1 AAATTGACCAGCTTGTCCGTATACGAAAGACATTCTAGACTCGACAGAATGCCGATCTTCTTGGGGGCAGTCCAGCCCACTCACTCACCAAAACACACATTTGGAAACATTTCGTAGACTGCTTACTTGTTCTTAGTTTAGACTTCGAGTCCAATCAATTG 130 31228016 0.984629081 24 125 993 0.968944099 2.193124598 0.099378882 0.2 0.354037267 130 5 0 156 3R:31227902-31228062 6 CG12054 FBtr0085758 31227841 31228491 AGACTG 6mer2-7 dme-miR-14-3p 3R + 31227992 31228058 3'utr CG12054 FlyBase G35667.1 AAACACACATTTGGAAACATTTCGTAGACTGCTTACTTGTTCTTAGTTTAGACTTCGAGTCCAATCA 74 31228015 0.919267044 14 68 579 0.923076923 2.033423755 0.025641026 0.445945946 0.64957265 74 9 0 108 3R:31227992-31228058 6 81.5 2193 FBgn0039831 3333.656667 103.7033333 158.5733333 0.024447629 0.785895664 0.51395779 1 2 1.5 0.25 dme-bantam-3p 7mer-m8 TGATCTC 3R 31228214 31228220 + 3R_31228214_31228220_+ 0.622393954 0.628587423 0.625490688 0.004379395 CG12054 FBtr0085758 31227841 31228491 3R + 31228160 31228245 3'utr CG12054 FlyBase G47285.1 ATTCATCGATTGTATGTATGACTTTCATGCTTGTATTAAACTATTTACAACTGCTGATCTCCTCTTAATTTAATTAGGCTATGCAA 340 31228213 0.828338802 19 323 3019 0.955916473 1.836745966 0.011600928 0.217647059 0.382830626 340 14 5 412 3R:31228160-31228245 7 CG12054 FBtr0085758 31227841 31228491 TGATCTC 7mer-m8 dme-bantam-3p 3R + 31228156 31228245 3'utr CG12054 FlyBase G35668.1 ATTTATTCATCGATTGTATGTATGACTTTCATGCTTGTATTAAACTATTTACAACTGCTGATCTCCTCTTAATTTAATTAGGCTATGCAA 215 31228212 0.83012683 19 196 1897 0.912052117 1.84509804 0.016286645 0.339534884 0.537459283 215 24 3 280 3R:31228156-31228245 7 253.5 2194 FBgn0039831 3333.656667 103.7033333 158.5733333 0.076042624 2.444473016 1.598629446 1 2 1.5 0.25 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 31229157 31229163 + 3R_31229157_31229163_+ 0.778999594 0.787343748 0.783171671 0.00590017 CG12054 FBtr0335408|FBtr0113312|FBtr0335409 31229123|31229123|31229123 31231259|31229387|31229387 3R + 31229132 31229188 3'utr CG12054 FlyBase G47288.1 ATCGGATGAGAAGGCAAGAGAGTTGGCTGTGATGAAGTAGTAACTAACTGACTAACA 385 31229155 0.780017737 10 378 2042 0.977375566 1.857332496 0.332579186 0.124675325 0.237556561 385 5 5 432 3R:31229132-31229188 7 CG12054 FBtr0335409|FBtr0113312|FBtr0335408 31229123|31229123|31229123 31229387|31229387|31231259 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R + 31229127 31229245 3'utr CG12054 FlyBase G35673.1 GGCATATCGGATGAGAAGGCAAGAGAGTTGGCTGTGATGAAGTAGTAACTAACTGACTAACAAACCTGACAAGAGGCGGAGAAAGAGGATTCGTCAATAAGGCAGATGGGAAAAGGATG 345 31229155 0.837597036 10 336 1742 0.974854932 2.225309282 0.353965184 0.344927536 0.562862669 345 11 2 504 3R:31229127-31229245 7 358.5 2195 FBgn0039831 3333.656667 103.7033333 158.5733333 0.107539569 3.456976632 2.260783654 2 2 2 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3R 31229651 31229657 + 3R_31229651_31229657_+ 0.801827741 0.810325085 0.806076413 0.006008569 CG12054 FBtr0335408 31229123 31231259 3R + 31229608 31229678 3'utr CG12054 FlyBase G47293.1 AGCGACAACATTTTAGTAAATACATTTGGAGAATTTTCTTCAACTAGTCATTATTGTAGTTAAATTAAATT 91 31229633 0.770142959 16 89 930 0.980392157 2 0.078431373 0.10989011 0.205882353 91 2 0 100 3R:31229608-31229678 7 CG12054 FBtr0335408 31229123 31231259 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 31229592 31229678 3'utr CG12054 FlyBase G35677.1 AAAAATTAATTATACAAGCGACAACATTTTAGTAAATACATTTGGAGAATTTTCTTCAACTAGTCATTATTGTAGTTAAATTAAATT 44 31229659 0.989950037 15 44 435 1 1.819543936 0.075757576 0.454545455 0.636363636 44 0 0 66 3R:31229592-31229678 7 38.5 2196 FBgn0039831 3333.656667 103.7033333 158.5733333 0.01154888 0.371251326 0.242789876 18 -8 5 0.25 dme-miR-305-5p 7mer-m1 GTACAAT 3R 31229775 31229781 + 3R_31229775_31229781_+ 0.765585314 0.604228197 0.684906755 0.1140967 CG12054 FBtr0335408 31229123 31231259 3R + 31229701 31229835 3'utr CG12054 FlyBase G47294.1 ACATAACTTTCTAACCTACTGGTTGGTGGAATTCCCGAACCCTATATTTATAACTTAAGAAACCTCTATCCTGTGTACAATTTCAATGAAATCTTAGTGAAGGGTCTTTCCCCAATCAGTTGTTTGCGTCATTTT 50 31229795 0.987434289 19 44 404 0.901639344 1.439332694 0.37704918 0.18 0.327868852 50 5 1 55 3R:31229701-31229835 7 CG12054 FBtr0335408 31229123 31231259 GTACAAT 7mer-m1 dme-miR-305-5p 3R + 31229759 31229822 3'utr CG12054 FlyBase G35679.1 GAAACCTCTATCCTGTGTACAATTTCAATGAAATCTTAGTGAAGGGTCTTTCCCCAATCAGTTG 22 31229794 0.668951611 8 19 170 0.838709677 1.414973348 0.483870968 0.318181818 0.516129032 22 5 0 26 3R:31229759-31229822 7 19.5 2197 FBgn0039831 3333.656667 103.7033333 158.5733333 0.005849433 0.188036386 0.122971496 -20 -19 -19.5 0.25 dme-miR-1008-3p 7mer-m8 AGCTGTG 3R 31230131 31230137 + 3R_31230131_31230137_+ 0.624280611 0.591621723 0.607951167 0.02309333 CG12054 FBtr0335408 31229123 31231259 3R + 31230108 31230153 3'utr CG12054 FlyBase G47298.1 TATAGAGCAGAGCATGCATCTGTAGCTGTGTGAGTGTTTGTCCGTG 45 31230138 0.663285063 7 43 337 0.964285714 1.431363764 0.482142857 0.2 0.357142857 45 1 1 54 3R:31230108-31230153 7 CG12054 FBtr0335408 31229123 31231259 AGCTGTG 7mer-m8 dme-miR-1008-3p 3R + 31230110 31230153 3'utr CG12054 FlyBase G35681.1 TAGAGCAGAGCATGCATCTGTAGCTGTGTGAGTGTTTGTCCGTG 31 31230138 0.742704348 7 31 209 1 1.662757832 0.608695652 0.322580645 0.543478261 31 0 0 46 3R:31230110-31230153 7 38 2198 FBgn0039831 3333.656667 103.7033333 158.5733333 0.011398894 0.36642988 0.239636761 -7 -7 -7 0.25 dme-miR-14-3p 7mer-m8 AAGACTG 3R 31230801 31230807 + 3R_31230801_31230807_+ 0.671715025 0.671506495 0.67161076 0.000147432 CG12054 FBtr0335408 31229123 31231259 3R + 31230775 31230831 3'utr CG12054 FlyBase G47303.1 AATAAAATGAGTATGTCATCTTATATAAGACTGCTGTTATGTTCGTAAATATATTTA 90 31230799 0.703281641 9 84 844 0.904761905 1.977723605 0.142857143 0.144444444 0.266666667 90 10 0 95 3R:31230775-31230831 7 CG12054 FBtr0335408 31229123 31231259 AAGACTG 7mer-m8 dme-miR-14-3p 3R + 31230777 31230830 3'utr CG12054 FlyBase G35684.1 TAAAATGAGTATGTCATCTTATATAAGACTGCTGTTATGTTCGTAAATATATTT 75 31230799 0.701161977 9 61 664 0.836538462 1.939519253 0.115384615 0.293333333 0.490384615 75 17 0 87 3R:31230777-31230830 7 80 2199 FBgn0039831 3333.656667 103.7033333 158.5733333 0.023997672 0.771431327 0.504498444 2 2 2 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 31231220 31231225 + 3R_31231220_31231225_+ 0.542888588 0.665841589 0.604365089 0.0869409 CG12054 FBtr0335408|FBtr0335408|FBtr0335408 31229123|31229123|31229123 31231259|31231259|31231259 3R + 31231202 31231239 3'utr CG12054 FlyBase G47305.1 TATTCTCTTTTTGCTTTATGTGATCTATTACATACTAC 23 31231221 0.684373941 7 22 271 0.965517241 1.146128036 0 0.173913043 0.344827586 23 0 1 28 3R:31231202-31231239 6 CG12054 FBtr0335408|FBtr0335408|FBtr0335408 31229123|31229123|31229123 31231259|31231259|31231259 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 31231192 31231239 3'utr CG12054 FlyBase G35686.1 AGTAGTAAAATATTCTCTTTTTGCTTTATGTGATCTATTACATACTAC 14 31231218 0.899099265 10 13 160 0.958333333 1.361727836 0 0.5 0.708333333 14 1 0 23 3R:31231192-31231239 6 17.5 2200 FBgn0039831 3333.656667 103.7033333 158.5733333 0.005249491 0.168750603 0.110359035 -1 2 0.5 0.25 dme-miR-1002-5p 8mer-A1 CTACTTAA 3R 31401470 31401477 + 3R_31401470_31401477_+ 0.604664022 0.621639293 0.613151658 0.01200335 Gcn2 FBtr0334552|FBtr0085787|FBtr0334551 31401376|31401376|31401376 31401560|31402013|31401560 3R + 31401416 31401501 3'utr Gcn2 FlyBase G47330.1 AGACCAGCCAGTAGTGTAAGCTCGAAAGTGTCACAAATTATTTTCGCCGAAATTCTACTTAACTGGCTGCCCTCCGTGCCATTAAC 11 31401487 0.945997837 8 11 66 1 1.113943352 0.076923077 0.090909091 0.230769231 11 0 0 13 3R:31401416-31401501 8 Gcn2 FBtr0334552|FBtr0085787|FBtr0334551 31401376|31401376|31401376 31401560|31402013|31401560 CTACTTAA 8mer-A1 dme-miR-1002-5p 3R + 31401458 31401496 3'utr Gcn2 FlyBase G35701.1 TTCGCCGAAATTCTACTTAACTGGCTGCCCTCCGTGCCA 8 31401468 0.953398027 5 6 50 0.642857143 0.954242509 0.285714286 0.625 0.785714286 8 5 0 9 3R:31401458-31401496 8 7 2201 FBgn0019990 1106.633333 23.54666667 35.94666667 0.006325492 0.297281993 0.194732938 -17 2 -7.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 31401608 31401613 + 3R_31401608_31401613_+ 0.999074739 0.954710832 0.976892786 0.031370015 Gcn2 FBtr0085787 31401376 31402013 3R + 31401594 31401629 3'utr Gcn2 FlyBase G47331.1 TTATTGAATGCCTTTCTAGTGGAAGCTCTCATTCAT 18 31401607 0.614506343 5 16 143 0.904761905 1.278753601 0.19047619 0.111111111 0.238095238 18 2 0 19 3R:31401594-31401629 6 Gcn2 FBtr0085787 31401376 31402013 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 31401596 31401626 3'utr Gcn2 FlyBase G35702.1 ATTGAATGCCTTTCTAGTGGAAGCTCTCATT 7 31401607 0.662043147 2 7 52 1 1.079181246 0.25 0.571428571 0.75 7 0 0 12 3R:31401596-31401626 6 12.5 2202 FBgn0019990 1106.633333 23.54666667 35.94666667 0.011295521 0.530860702 0.347737389 1 1 1 0.25 dme-miR-282-5p 8mer-A1 AGAGGCTA 3R 31401801 31401808 + 3R_31401801_31401808_+ 0.580459872 0.610607213 0.595533542 0.02131736 Gcn2 FBtr0085787 31401376 31402013 3R + 31401783 31401829 3'utr Gcn2 FlyBase G47332.1 TCGAAATTAAAGTTAAGTAGAGGCTAATATTTTCAGAGAAAATTCTT 48 31401800 0.893086411 7 46 326 0.949152542 1.271066772 0.084745763 0.229166667 0.372881356 48 1 2 56 3R:31401783-31401829 8 Gcn2 FBtr0085787 31401376 31402013 AGAGGCTA 8mer-A1 dme-miR-282-5p 3R + 31401783 31401821 3'utr Gcn2 FlyBase G35704.1 TCGAAATTAAAGTTAAGTAGAGGCTAATATTTTCAGAGA 35 31401800 0.870531403 5 34 228 0.979166667 1.672097858 0 0.285714286 0.479166667 35 1 0 47 3R:31401783-31401821 8 41.5 2203 FBgn0019990 1106.633333 23.54666667 35.94666667 0.03750113 1.762457531 1.154488131 1 1 1 0.25 dme-miR-1006-3p 7mer-A1 GAATTTA 3R 31457481 31457487 + 3R_31457481_31457487_+ 0.511959361 0.823349549 0.667654455 0.220186051 Gprk2 FBtr0085788 31456465 31457873 3R + 31457453 31457512 3'utr Gprk2 FlyBase G47364.1 AGAAAGAAACAAAAGTAAACCAATTGGAGAATTTATTATGTTAGTATGAAAATTAATTAT 10 31457476 0.989455083 6 10 92 1 1.041392685 0.363636364 0.1 0.181818182 10 0 0 11 3R:31457453-31457512 7 Gprk2 FBtr0085788 31456465 31457873 GAATTTA 7mer-A1 dme-miR-1006-3p 3R + 31457452 31457500 3'utr Gprk2 FlyBase G35738.1 AAGAAAGAAACAAAAGTAAACCAATTGGAGAATTTATTATGTTAGTATG 7 31457484 0.98631948 4 6 47 0.909090909 1 0.363636364 0.285714286 0.545454545 7 1 0 10 3R:31457452-31457500 7 7.5 2204 FBgn0261988 1488.626667 40.02 61.47666667 0.005038201 0.187406297 0.121997506 5 -3 1 0.25 dme-miR-1003-3p 8mer-A1 ATGTGAGA 3R 31575989 31575996 - 3R_31575989_31575996_- 0.63646466 0.634445873 0.635455267 0.001427507 pygo FBtr0085806 31575833 31576891 3R - 31575922 31576012 3'utr pygo FlyBase G56037.1 AAGAAATTATGAATTCATGTGAGAAAGGTTAATTTGTAATTTAAGACGAATGTGGAGGACGCAGCGAACATAAACGATTCAAACGAGAAAA 25 31575999 0.951748212 6 22 141 0.888888889 1.380211242 0.37037037 0.08 0.148148148 25 3 0 24 3R:31575922-31576012 8 pygo FBtr0085806 31575833 31576891 ATGTGAGA 8mer-A1 dme-miR-1003-3p 3R - 31575942 31576012 3'utr pygo FlyBase G42287.1 AAGAAATTATGAATTCATGTGAGAAAGGTTAATTTGTAATTTAAGACGAATGTGGAGGACGCAGCGAACAT 13 31575999 0.973276884 3 13 84 1 1.278753601 0.263157895 0.384615385 0.578947368 13 0 0 19 3R:31575942-31576012 8 14.5 2205 FBgn0043900 862.0266667 23.10666667 35.35666667 0.016820825 0.627524524 0.410106533 3 3 3 0.25 dme-miR-980-3p 8mer-A1 GGCAGCTA 3R 31576686 31576693 - 3R_31576686_31576693_- 0.668598821 0.664654888 0.666626855 0.002788758 pygo FBtr0085806 31575833 31576891 3R - 31576661 31576713 3'utr pygo FlyBase G56043.1 GACCCACCAGTCCCCATCCCGGCAGCTAAGCCCCGTAGCCAGAATGCGAACCA 16 31576698 0.835690792 5 16 35 1 1.230448921 0.058823529 0.0625 0.117647059 16 0 0 17 3R:31576661-31576713 8 pygo FBtr0085806 31575833 31576891 GGCAGCTA 8mer-A1 dme-miR-980-3p 3R - 31576672 31576709 3'utr pygo FlyBase G42290.1 CACCAGTCCCCATCCCGGCAGCTAAGCCCCGTAGCCAG 7 31576698 0.733471962 2 5 19 0.666666667 0.77815125 0 0.285714286 0.444444444 7 3 0 6 3R:31576672-31576709 8 11.5 2206 FBgn0043900 862.0266667 23.10666667 35.35666667 0.013340655 0.497691864 0.325256906 5 5 5 0.25 dme-miR-1007-3p 8mer-A1 TGAGCTTA 3R 31596910 31596917 - 3R_31596910_31596917_- 0.623442961 0.623389114 0.623416038 3.81E-05 CycG FBtr0333328 31596640 31599272 3R - 31596869 31597076 3'utr CycG FlyBase G56057.2 ATTTTACATTGTATTTAGCGCGGAGTTAGTTAAATATTTGCAAGTATCAACATCAAAAACATGAATGAAAATCTCAATTATTGTATATTTAGTTTTTATTTGACGACTACTTTTATTCATGATAACAATGATGGTGGGCAATTGCCCATCGTCAAGTTTTGAGCTTATATTCGGTTGAGGTTTACACTTTAGGATTAGTTACCACACG 224 31596917 0.867040235 34 214 2256 0.957198444 2.390935107 0.089494163 0.133928571 0.245136187 224 11 0 246 3R:31596869-31597076 8 CycG FBtr0333328 31596640 31599272 TGAGCTTA 8mer-A1 dme-miR-1007-3p 3R - 31596874 31597077 3'utr CycG FlyBase G42303.1 AATTTTACATTGTATTTAGCGCGGAGTTAGTTAAATATTTGCAAGTATCAACATCAAAAACATGAATGAAAATCTCAATTATTGTATATTTAGTTTTTATTTGACGACTACTTTTATTCATGATAACAATGATGGTGGGCAATTGCCCATCGTCAAGTTTTGAGCTTATATTCGGTTGAGGTTTACACTTTAGGATTAGTTACC 133 31596917 0.779429794 29 131 1301 0.974619289 2.283301229 0.121827411 0.368421053 0.573604061 133 5 0 192 3R:31596874-31597077 8 111 2207 FBgn0039858 20619.65667 595.7166667 909.0766667 0.005383213 0.186330191 0.122101913 0 0 0 0.25 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 31597223 31597229 - 3R_31597223_31597229_- 0.589867123 0.627863784 0.608865454 0.026867724 CycG FBtr0333328 31596640 31599272 3R - 31597130 31597277 3'utr CycG FlyBase G56058.1 AGTCGAAATGCGAAACAAATAATTATATTTAAGCGACGGAGATCATCATGTGTTCGTTTAAGCTTAGTCCACTATAAATAACAGCCAATTGACGATTAGGCGATTAAGAGAAAGGTGAAAGCGGTGAAAATATGTCTAGCACTAAGTT 195 31597229 0.987348193 21 182 1601 0.944700461 1.533602611 0.235023041 0.112820513 0.202764977 195 7 5 205 3R:31597130-31597277 7 CycG FBtr0333328 31596640 31599272 TGTGTTC 7mer-m8 dme-miR-317-3p 3R - 31597127 31597351 3'utr CycG FlyBase G42304.1 CTGAACCACAGCCTGAAGATCAGTTCTGTGAAAGCTGTGAGTGAGAAAGCAGAATCCGAATACATTGTTAACACAGTCGAAATGCGAAACAAATAATTATATTTAAGCGACGGAGATCATCATGTGTTCGTTTAAGCTTAGTCCACTATAAATAACAGCCAATTGACGATTAGGCGATTAAGAGAAAGGTGAAAGCGGTGAAAATATGTCTAGCACTAAGTTTTT 154 31597229 0.975900291 31 143 1078 0.931914894 1.437354128 0.170212766 0.402597403 0.608510638 154 9 7 219 3R:31597127-31597351 7 121 2208 FBgn0039858 20619.65667 595.7166667 909.0766667 0.005868187 0.203116694 0.133102085 0 0 0 0.25 dme-miR-980-3p 6mer3-8 GGCAGC 3R 31597661 31597666 - 3R_31597661_31597666_- 0.961285399 0.961169784 0.961227592 8.17E-05 CycG FBtr0333328 31596640 31599272 3R - 31597639 31597692 3'utr CycG FlyBase G56061.1 CAGAAAACTTTTATTTAAATCCACTTGGCAGCGGAATGTGCAAACTCCTGTCTG 102 31597667 0.834565582 5 97 515 0.976190476 2.089905111 0.03968254 0.176470588 0.333333333 102 3 0 123 3R:31597639-31597692 6 CycG FBtr0333328 31596640 31599272 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 31597599 31597688 3'utr CycG FlyBase G42306.1 AAACTTTTATTTAAATCCACTTGGCAGCGGAATGTGCAAACTCCTGTCTGTAAATTTGAATAAAATGCGTTTGCCCCGCCAAAGGGGCAT 90 31597667 0.949070601 6 88 402 0.993055556 1.854306042 0.020833333 0.444444444 0.652777778 90 0 1 143 3R:31597599-31597688 6 90.5 2209 FBgn0039858 20619.65667 595.7166667 909.0766667 0.004389016 0.151917858 0.09955156 1 1 1 0.25 dme-miR-1012-3p 8mer-A1 TTGACTAA 3R 31598272 31598279 - 3R_31598272_31598279_- 0.626893304 0.626897372 0.626895338 2.90E-06 CycG FBtr0333328 31596640 31599272 3R - 31598186 31598309 3'utr CycG FlyBase G56063.1 AGAAAACTAAAGTATAATTCGCCGCCTGTATTGACTAAGAACTCTTAACAATAATATAATAACTTTAAACAAGGTACAATATGTAGTGTGTGTCTAGTAGATTTTTCTCTGTATAACAAAATCA 40 31598282 0.980977245 13 37 274 0.942307692 1.69019608 0.057692308 0.25 0.423076923 40 3 0 49 3R:31598186-31598309 8 CycG FBtr0333328 31596640 31599272 TTGACTAA 8mer-A1 dme-miR-1012-3p 3R - 31598253 31598323 3'utr CycG FlyBase G42309.1 ACGAGAAAGCCCATAGAAAACTAAAGTATAATTCGCCGCCTGTATTGACTAAGAACTCTTAACAATAATAT 35 31598282 0.999737317 10 32 186 0.941176471 1.681241237 0.098039216 0.382352941 0.588235294 34 3 0 48 3R:31598253-31598323 8 21.5 2210 FBgn0039858 20619.65667 595.7166667 909.0766667 0.001042694 0.036090983 0.023650371 3 3 3 0.25 dme-miR-980-3p 8mer-A1 GGCAGCTA 3R 31614950 31614957 + 3R_31614950_31614957_+ 0.574333787 0.630166986 0.602250387 0.039480034 Med FBtr0085815|FBtr0085816|FBtr0337030 31614900|31614900|31614900 31615200|31615200|31615375 3R + 31614865 31614990 stop_codon Med FlyBase G47426.1 CGCCATGCCGATCGATGGCCCGCGTGCCGCCGCCTAATCCGTATTTATTATTGGCCCACATCTATGCTAAGGACTCAGTTTTAGCGGCAGCTATCCGTCAGCTATTTGCGGATTTTGTGTTTTTCA 52 31614945 0.986976867 22 47 404 0.901639344 1.263241435 0.31147541 0.173076923 0.295081967 52 4 2 55 3R:31614865-31614990 8 Med FBtr0337030|FBtr0085815|FBtr0085816 31614900|31614900|31614900 31615375|31615200|31615200 GGCAGCTA 8mer-A1 dme-miR-980-3p 3R + 31614887 31614980 stop_codon Med FlyBase G35778.1 CGTGCCGCCGCCTAATCCGTATTTATTATTGGCCCACATCTATGCTAAGGACTCAGTTTTAGCGGCAGCTATCCGTCAGCTATTTGCGGATTTT 47 31614944 0.987822594 14 37 321 0.863013699 1.322219295 0.260273973 0.425531915 0.630136986 47 8 2 63 3R:31614887-31614980 8 36 2211 FBgn0011655 590.06 20.83333333 31.85 0.061010745 1.728 1.130298273 5 6 5.5 0.25 dme-miR-980-3p 6mer2-7 GCAGCT 3R 31615080 31615085 + 3R_31615080_31615085_+ 0.991960307 0.990268321 0.991114314 0.001196425 Med FBtr0085815|FBtr0085816|FBtr0337030 31614900|31614900|31614900 31615200|31615200|31615375 3R + 31615047 31615100 3'utr Med FlyBase G47428.1 AAAAAATTGAAACAACTTAGAAGTCTTAAGTATGCAGCTGTAAAGCACTAAGCA 14 31615079 0.976095096 6 12 72 0.8125 0.812913357 0.1875 0.142857143 0.25 14 2 1 13 3R:31615047-31615100 6 Med FBtr0337030|FBtr0085815|FBtr0085816 31614900|31614900|31614900 31615375|31615200|31615200 GCAGCT 6mer2-7 dme-miR-980-3p 3R + 31615060 31615100 3'utr Med FlyBase G35779.1 AACTTAGAAGTCTTAAGTATGCAGCTGTAAAGCACTAAGCA 10 31615079 0.770884507 3 8 63 0.8125 1.113943352 0 0.5 0.6875 10 3 0 13 3R:31615060-31615100 6 10 2212 FBgn0011655 590.06 20.83333333 31.85 0.016947429 0.48 0.313971743 1 1 1 0.25 dme-bantam-3p 6mer3-8 TGATCT 3R 31662121 31662126 + 3R_31662121_31662126_+ 0.562624541 0.748115525 0.655370033 0.131161944 kek6 FBtr0330107|FBtr0085821 31661629|31661608 31664646|31664646 3R + 31662103 31662140 3'utr kek6 FlyBase G47438.1 AGGTATAGCGACCAAAACTGATCTTCATAAGGTGTATA 10 31662121 0.908221345 2 10 50 1 1.041392685 0.454545455 0.1 0.181818182 10 0 0 11 3R:31662103-31662140 6 kek6 FBtr0330107|FBtr0085821 31661629|31661608 31664646|31664646 TGATCT 6mer3-8 dme-bantam-3p 3R + 31662101 31662142 3'utr kek6 FlyBase G35786.1 TAAGGTATAGCGACCAAAACTGATCTTCATAAGGTGTATAGT 8 31662121 0.90908133 3 8 50 1 1 0.2 0.25 0.4 8 0 0 10 3R:31662101-31662142 6 9 2213 FBgn0039862 176.9033333 3.166666667 4.81 0.050875243 2.842105263 1.871101871 0 0 0 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 31676639 31676644 + 3R_31676639_31676644_+ 0.995611597 0.991674212 0.993642904 0.002784162 CG1815 FBtr0085823|FBtr0085823|FBtr0085823 31675699|31675699|31675699 31677971|31677971|31677971 3R + 31676589 31676675 3'utr CG1815 FlyBase G47457.1 GCGAATTGCATGCGTGAGGCGCAGTTGTACTGCTGTTGGAACACATCCTACTGTGACTATCCCTGCCAGCAGCTTCACTGGCCTGGA 14 31676637 0.967580579 8 13 74 1 1.204119983 0.1875 0.142857143 0.25 14 0 0 16 3R:31676589-31676675 6 CG1815 FBtr0085823|FBtr0085823|FBtr0085823 31675699|31675699|31675699 31677971|31677971|31677971 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 31676594 31676658 3'utr CG1815 FlyBase G35798.1 TTGCATGCGTGAGGCGCAGTTGTACTGCTGTTGGAACACATCCTACTGTGACTATCCCTGCCAGC 5 31676646 0.981573819 3 4 39 0.857142857 0.77815125 0.428571429 0.4 0.571428571 5 1 0 6 3R:31676594-31676658 6 4.5 2214 FBgn0039863 1117.306667 23.11666667 35.54333333 0.004027542 0.194664744 0.126606021 2 -7 -2.5 0.25 dme-miR-282-5p 6mer2-7 GAGGCT 3R 31731787 31731792 + 3R_31731787_31731792_+ 0.971713472 0.999167838 0.985440655 0.019413122 ttk FBtr0085826|FBtr0303228|FBtr0085828|FBtr0085830 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 3R + 31731760 31731826 3'utr ttk FlyBase G47484.1 CTATCAAACGATTTATGTTGTATATCGGAGGCTTAAATTATCGCCAAAGAAAATGAAAATCAAAAAC 27 31731775 0.95655443 8 24 199 0.911764706 1.190331698 0.235294118 0.148148148 0.323529412 27 2 1 31 3R:31731760-31731826 6 ttk FBtr0085830|FBtr0303228|FBtr0085828|FBtr0085826 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 GAGGCT 6mer2-7 dme-miR-282-5p 3R + 31731759 31731810 3'utr ttk FlyBase G35819.1 TCTATCAAACGATTTATGTTGTATATCGGAGGCTTAAATTATCGCCAAAGAA 14 31731776 0.965029601 6 13 109 0.857142857 1.255272505 0.238095238 0.428571429 0.619047619 14 3 0 18 3R:31731759-31731810 6 18.5 2215 FBgn0003870 1332.35 36.30666667 55.43333333 0.01388524 0.509548292 0.333734215 12 11 11.5 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 31732508 31732514 + 3R_31732508_31732514_+ 0.784450423 0.803163797 0.79380711 0.013232372 ttk FBtr0085826|FBtr0303228|FBtr0085828|FBtr0085830 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 3R + 31732488 31732519 3'utr ttk FlyBase G47489.1 ATAGAGTCATGCTTTGATGCCCAAAGAAAATG 7 31732505 0.931405691 2 7 40 1 0.84509804 0.142857143 0 0 7 0 0 7 3R:31732488-31732519 7 ttk FBtr0085830|FBtr0303228|FBtr0085828|FBtr0085826 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 31732442 31732524 3'utr ttk FlyBase G35823.1 AAAAATGTCCAAACTCGAAACCTGAACGAGGAATATAGCTACATATATAGAGTCATGCTTTGATGCCCAAAGAAAATGAAAGA 12 31732505 0.925752224 6 12 43 1 1.322219295 0.19047619 0.416666667 0.666666667 12 0 0 21 3R:31732442-31732524 7 6 2216 FBgn0003870 1332.35 36.30666667 55.43333333 0.004503321 0.165258906 0.108238124 3 3 3 0.25 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 31734686 31734693 + 3R_31734686_31734693_+ 0.621411742 0.626227596 0.623819669 0.003405356 ttk FBtr0085827|FBtr0303227|FBtr0085825|FBtr0085829 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 3R + 31734595 31734703 3'utr ttk FlyBase G47492.1 AAGCAATCGTGGCACTCAAACGCAACACACCAGACTCAAAACGATTTTTAGTTAATGTAAACCCGTAAGCAATATTAATTCTAACACTTGCTCCGTCCAGAACGCCTTT 44 31734684 0.969524576 11 42 253 0.923076923 1.681241237 0.134615385 0.136363636 0.269230769 44 4 0 48 3R:31734595-31734703 8 ttk FBtr0085825|FBtr0085829|FBtr0303227|FBtr0085827 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R + 31734665 31734705 3'utr ttk FlyBase G35827.1 AATATTAATTCTAACACTTGCTCCGTCCAGAACGCCTTTTT 26 31734684 0.672753714 6 23 155 0.842105263 1.204119983 0.157894737 0.346153846 0.552631579 26 5 1 32 3R:31734665-31734705 8 31.5 2217 FBgn0003870 1332.35 36.30666667 55.43333333 0.023642436 0.867609254 0.56825015 2 2 2 0.25 dme-miR-995-5p 6mer3-8 AATTCG 3R 31734813 31734818 + 3R_31734813_31734818_+ 0.629040591 0.630233513 0.629637052 0.000843508 ttk FBtr0085827|FBtr0303227|FBtr0085825|FBtr0085829 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 3R + 31734767 31734904 3'utr ttk FlyBase G47493.1 TGAGCAGTTCAGTGAACTTTAATGACTTTCGGCTTTAATTATAAACAATTCGACTGGCCGCTTACTGGATCCGCACACGATCCGTAAGGCAAGCAACTTTAGAACTTTTCATTTCTCTTTGTGATTTTGTTAAACCTT 57 31734816 0.944035694 18 54 533 0.956521739 1.819543936 0.289855072 0.210526316 0.347826087 57 3 0 66 3R:31734767-31734904 6 ttk FBtr0085825|FBtr0085829|FBtr0303227|FBtr0085827 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 AATTCG 6mer3-8 dme-miR-995-5p 3R + 31734764 31734841 3'utr ttk FlyBase G35828.1 AATTGAGCAGTTCAGTGAACTTTAATGACTTTCGGCTTTAATTATAAACAATTCGACTGGCCGCTTACTGGATCCGCA 25 31734816 0.980015146 11 23 162 0.951219512 1.591064607 0.097560976 0.48 0.682926829 25 2 0 39 3R:31734764-31734841 6 15.5 2218 FBgn0003870 1332.35 36.30666667 55.43333333 0.01163358 0.42691884 0.279615153 -3 -3 -3 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3R 31734886 31734892 + 3R_31734886_31734892_+ 0.478875006 0.521162734 0.50001887 0.029901919 ttk FBtr0085827|FBtr0303227|FBtr0085825|FBtr0085829 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 3R + 31734767 31734904 3'utr ttk FlyBase G47493.1 TGAGCAGTTCAGTGAACTTTAATGACTTTCGGCTTTAATTATAAACAATTCGACTGGCCGCTTACTGGATCCGCACACGATCCGTAAGGCAAGCAACTTTAGAACTTTTCATTTCTCTTTGTGATTTTGTTAAACCTT 57 31734892 0.944035694 18 54 533 0.956521739 1.819543936 0.289855072 0.210526316 0.347826087 57 3 0 66 3R:31734767-31734904 7 ttk FBtr0085825|FBtr0085829|FBtr0303227|FBtr0085827 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 31734873 31734901 3'utr ttk FlyBase G35829.1 TTTCATTTCTCTTTGTGATTTTGTTAAAC 13 31734892 0.61239851 6 13 166 1 1.204119983 0.25 0.230769231 0.375 13 0 0 16 3R:31734873-31734901 7 16.5 2219 FBgn0003870 1332.35 36.30666667 55.43333333 0.012384133 0.45446199 0.297654841 -6 -6 -6 0.25 dme-miR-14-3p 6mer3-8 AAGACT 3R 31735290 31735295 + 3R_31735290_31735295_+ 0.999760386 0.99987687 0.999818628 8.24E-05 ttk FBtr0085827|FBtr0303227|FBtr0085825|FBtr0085829 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 3R + 31735271 31735310 3'utr ttk FlyBase G47496.1 AACGCAACAAATACGACTTAAGACTTGTGCGCTCAATGAC 15 31735298 0.948357808 6 14 71 0.954545455 1.322219295 0.090909091 0.266666667 0.5 15 1 0 21 3R:31735271-31735310 6 ttk FBtr0085825|FBtr0085829|FBtr0303227|FBtr0085827 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 AAGACT 6mer3-8 dme-miR-14-3p 3R + 31735253 31735314 3'utr ttk FlyBase G35831.1 GATTTTTACAGTTTACTTAACGCAACAAATACGACTTAAGACTTGTGCGCTCAATGACTAGA 15 31735297 0.972504993 6 13 67 0.947368421 1.255272505 0.157894737 0.214285714 0.421052632 14 1 0 18 3R:31735253-31735314 6 13.5 2220 FBgn0003870 1332.35 36.30666667 55.43333333 0.010132473 0.371832538 0.243535779 -8 -7 -7.5 0.25 dme-miR-278-3p 8mer-A1 CCCACCGA 3R 31750719 31750726 + 3R_31750719_31750726_+ 0.678003699 0.522151441 0.60007757 0.110204218 CG1910 FBtr0085840|FBtr0085839|FBtr0085841 31750711|31750711|31750711 31751894|31751894|31751894 3R + 31750699 31750755 stop_codon CG1910 FlyBase G47529.1 AAGTGTGTAACTAAACCAATCCCACCGATGGACAATCAACAACTTTAATGCGTTGCA 37 31750727 0.748846817 7 34 139 0.926829268 1.102662342 0.243902439 0.108108108 0.195121951 37 1 2 38 3R:31750699-31750755 8 CG1910 FBtr0085841|FBtr0085840|FBtr0085839 31750711|31750711|31750711 31751894|31751894|31751894 CCCACCGA 8mer-A1 dme-miR-278-3p 3R + 31750700 31750743 stop_codon CG1910 FlyBase G35853.2 AGTGTGTAACTAAACCAATCCCACCGATGGACAATCAACAACTT 19 31750718 0.842783658 4 18 48 1 1.505149978 0.15625 0.473684211 0.6875 19 0 0 32 3R:31750700-31750743 8 25.5 2221 FBgn0022349 2973.373333 120.6666667 184.89 0.008576118 0.211325967 0.137919844 -8 1 -3.5 0.25 dme-miR-980-3p 6mer3-8 GGCAGC 3R 31851752 31851757 - 3R_31851752_31851757_- 0.956004446 0.960362901 0.958183674 0.003081925 heph FBtr0300267|FBtr0300268|FBtr0300266|FBtr0346192|FBtr0300269|FBtr0300265|FBtr0085880|FBtr0112864|FBtr0085888|FBtr0112866|FBtr0085881|FBtr0085884|FBtr0085883|FBtr0112865|FBtr0085887|FBtr0085878|FBtr0300270|FBtr0085879|FBtr0300263|FBtr0300264|FBtr0306692|FBtr0085885|FBtr0085886|FBtr0306693|FBtr0085882 31851018|31851018|31851018|31851482|31846985|31851482|31851018|31850247|31851018|31846985|31850980|31851018|31851018|31851482|31851018|31851482|31851482|31851018|31850980|31851482|31851018|31851018|31851018|31851018|31851018 31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854 3R - 31851709 31851778 5'utr heph FlyBase G56121.1 AGCAACACCTTCAGATCCATTGGCAGCAACAAATACAAACTATAATCCGTAGTACAAGAAAAATGCACGC 58 31851758 0.931350159 3 56 207 0.971014493 1.525044807 0.043478261 0.172413793 0.304347826 58 1 1 67 3R:31851709-31851778 6 heph FBtr0085882|FBtr0085883|FBtr0306693|FBtr0300270|FBtr0085885|FBtr0306692|FBtr0300264|FBtr0300263|FBtr0085879|FBtr0085878|FBtr0085887|FBtr0085886|FBtr0112865|FBtr0085884|FBtr0300267|FBtr0085881|FBtr0112864|FBtr0300266|FBtr0300269|FBtr0085880|FBtr0346192|FBtr0300265|FBtr0112866|FBtr0085888|FBtr0300268 31851018|31851018|31851018|31851482|31851018|31851018|31851482|31850980|31851018|31851482|31851018|31851018|31851482|31851018|31851018|31850980|31850247|31851018|31846985|31851018|31851482|31851482|31846985|31851018|31851018 31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854|31851854 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 31851740 31851777 5'utr heph FlyBase G42363.1 GCAACACCTTCAGATCCATTGGCAGCAACAAATACAAA 32 31851758 0.771111603 3 31 101 0.943396226 1.698970004 0.018867925 0.46875 0.679245283 32 3 0 50 3R:31851740-31851777 6 44 2222 FBgn0011224 1726 50.21 76.84333333 0.025492468 0.876319458 0.572593589 1 1 1 0.25 dme-miR-8-3p 7mer-m8 CAGTATT 3R 32045473 32045479 - 3R_32045473_32045479_- 0.512692863 0.606920914 0.559806889 0.066629258 krz FBtr0085877 32045312 32049027 3R - 32045450 32045499 3'utr krz FlyBase G56126.1 TTTAATTTTTATATATTTGTCAGTATTGTTGCACCTCTTAGGTAGTAATT 20 32045481 0.782789772 5 18 244 0.904761905 1.278753601 0 0.05 0.095238095 20 2 0 19 3R:32045450-32045499 7 krz FBtr0085877 32045312 32049027 CAGTATT 7mer-m8 dme-miR-8-3p 3R - 32045449 32045496 3'utr krz FlyBase G42366.1 AATTTTTATATATTTGTCAGTATTGTTGCACCTCTTAGGTAGTAATTA 20 32045482 0.750792569 6 18 256 0.911764706 1.491361694 0 0.45 0.676470588 20 3 0 31 3R:32045449-32045496 7 19.5 2223 FBgn0040206 850.0433333 33.93333333 51.95666667 0.022940007 0.574656189 0.375312761 2 3 2.5 0.25 dme-miR-184-3p 6mer3-8 TCCGTC 3R 32048094 32048099 - 3R_32048094_32048099_- 0.940442009 0.987542391 0.9639922 0.033305012 krz FBtr0085877 32045312 32049027 3R - 32048080 32048116 3'utr krz FlyBase G56135.1 AAGTCGATCTGACCATTTCCGTCTGTCTGTATAAACG 8 32048100 0.757744421 2 8 59 1 1.079181246 0.083333333 0.375 0.583333333 8 0 0 12 3R:32048080-32048116 6 krz FBtr0085877 32045312 32049027 TCCGTC 6mer3-8 dme-miR-184-3p 3R - 32048088 32048109 3'utr krz FlyBase G42371.1 TCTGACCATTTCCGTCTGTCTG 6 32048100 0.696338536 2 6 44 1 0.954242509 0.111111111 0.5 0.666666667 6 0 0 9 3R:32048088-32048109 6 6.5 2224 FBgn0040206 850.0433333 33.93333333 51.95666667 0.007646669 0.191552063 0.125104254 1 1 1 0.25 dme-miR-14-3p 8mer-A1 AAGACTGA 3R 4241694 4241701 - 3R_4241694_4241701_- 0.631820884 0.62334878 0.627584832 0.005990679 CG14642 FBtr0089688 4241043 4241883 3R - 4241688 4241712 5'utr CG14642 FlyBase G47748.1 CACGATTCTCTAAGACTGACGGAAT 7 4241704 0.610135787 3 7 29 1 1.041392685 0.636363636 0.285714286 0.545454545 7 0 0 11 3R:4241688-4241712 8 CG14642 FBtr0089688 4241043 4241883 AAGACTGA 8mer-A1 dme-miR-14-3p 3R - 4241663 4241714 5'utr CG14642 FlyBase G36027.1 AACACGATTCTCTAAGACTGACGGAATACGTTAGACCTGTCCGCCTGTGGGT 11 4241703 0.965671453 5 9 47 0.909090909 1 0.181818182 0.1 0.181818182 10 1 0 10 3R:4241663-4241714 8 8.5 2225 FBgn0037222 149 13.89666667 21.19333333 0.05704698 0.611657472 0.401069519 3 2 2.5 0.25 dme-miR-1012-3p 6mer3-8 TTGACT 3R 4309916 4309921 - 3R_4309916_4309921_- 0.862935011 0.877294239 0.870114625 0.010153488 Vps24 FBtr0078958 4309645 4309972 3R - 4309900 4310158 stop_codon Vps24 FlyBase G47755.1 AAGGAGGTGGACAAGGTTTTGTGGGAGATCACAGATGGCAAGCTCGGGGAAGCTCCCCTGCCTCCAGAGGCTACACCGGCGGACAAGGCGTCTGCGTCTGCTGCGCGCGTCGAGGCTGAGCAGGACGATGAGGAGGGTGAGGAACTGCAAGAGATGCAAAGCCGCCTGGCCTCGCTGCGATCTTAAAACAACTGCTATGGGTATTTTATTTAGATTTGAAATTAAAGGCAAGTGATTTTGACTGGCAGACCTTATCAAA 70 4309922 0.927576483 28 68 373 0.962025316 1.278753601 0.265822785 0.128571429 0.227848101 70 0 3 76 3R:4309900-4310158 6 Vps24 FBtr0078958 4309645 4309972 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 4309902 4309948 3'utr Vps24 FlyBase G36030.1 TAGATTTGAAATTAAAGGCAAGTGATTTTGACTGGCAGACCTTATCA 27 4309922 0.602196842 7 25 171 1 1.568201724 0.081081081 0.307692308 0.513513514 26 0 0 37 3R:4309902-4309948 6 27 2226 FBgn0037231 389.0533333 43.63 67.21 0.069399225 0.618840248 0.401725934 1 1 1 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 4381017 4381024 + 3R_4381017_4381024_+ 0.592271997 0.537194268 0.564733132 0.038945815 CG11739 FBtr0078916|FBtr0078914|FBtr0078915|FBtr0078913 4380946|4380946|4380946|4380946 4381210|4381210|4381210|4381210 3R + 4381004 4381072 3'utr CG11739 FlyBase G39945.1 TTATTTCCCTTCTTGCATTTATTGGCATTTTGCCTGTTGACTTCTGTTCGAAATACTCCTGATATTAGC 24 4381016 0.731158188 9 23 244 0.961538462 1.096910013 0.230769231 0.083333333 0.153846154 24 0 1 25 3R:4381004-4381072 8 CG11739 FBtr0078913|FBtr0078915|FBtr0078914|FBtr0078916 4380946|4380946|4380946|4380946 4381210|4381210|4381210|4381210 TGCATTTA 8mer-A1 dme-miR-277-3p 3R + 4380995 4381078 3'utr CG11739 FlyBase G30171.1 AGCAACTATTTATTTCCCTTCTTGCATTTATTGGCATTTTGCCTGTTGACTTCTGTTCGAAATACTCCTGATATTAGCCTGACC 17 4381016 0.995153955 4 14 189 0.857142857 1.380211242 0.107142857 0.411764706 0.642857143 17 4 0 24 3R:4380995-4381078 8 15.5 2227 FBgn0037239 393.3433333 36.01 54.94333333 0.039405778 0.43043599 0.282108839 1 1 1 0.25 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 4389455 4389461 + 3R_4389455_4389461_+ 0.648018769 0.649233077 0.648625923 0.00085864 tub FBtr0302338 4389383 4389813 3R + 4389432 4389478 3'utr tub FlyBase G39971.2 ATGCAACCCAGATGTATTCATTTGGCAGCTGGGTGTGGACCTTCTTA 321 4389454 0.790789293 8 314 2679 0.980769231 2.552668216 0.271978022 0.118380062 0.222527473 321 7 0 357 3R:4389432-4389478 7 tub FBtr0302338 4389383 4389813 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 4389382 4389496 stop_codon tub FlyBase G30187.1 TAGATAAAAGCACCGACCATCGGCGGAGATGACATTCCGTTCGATAACTTATGCAACCCAGATGTATTCATTTGGCAGCTGGGTGTGGACCTTCTTATGTTATGCATGAGGTCCA 242 4389453 0.986216904 15 234 1977 0.972826087 2.076761772 0.320652174 0.400826446 0.605978261 242 8 2 358 3R:4389382-4389496 7 274 2228 FBgn0003882 635 38.28 58.43666667 0.431496063 7.157784744 4.688836917 1 2 1.5 0.25 dme-miR-304-5p 7mer-A1 GAGATTA 3R 4391721 4391727 + 3R_4391721_4391727_+ 0.80880775 0.814056051 0.811431901 0.003711109 CG14646 FBtr0078919|FBtr0302339 4391706|4391706 4392111|4391999 3R + 4391686 4391793 stop_codon CG14646 FlyBase G39980.2 AGATACTAATGACACCACGTGATTTATGACTGTTAGAGATTAAAGGACTCTTAAATCGAACCTGGTTCTTTATTGGTCTTATTTAAGTGTAATCATTTTCAATACAGT 387 4391718 0.985353884 12 377 3097 0.971800434 1.95230801 0.444685466 0.162790698 0.297180043 387 9 4 448 3R:4391686-4391793 7 CG14646 FBtr0302339|FBtr0078919 4391706|4391706 4391999|4392111 GAGATTA 7mer-A1 dme-miR-304-5p 3R + 4391686 4391779 stop_codon CG14646 FlyBase G30192.1 AGATACTAATGACACCACGTGATTTATGACTGTTAGAGATTAAAGGACTCTTAAATCGAACCTGGTTCTTTATTGGTCTTATTTAAGTGTAATC 340 4391718 0.726478229 16 329 2643 0.976608187 2.222716471 0.442495127 0.361764706 0.576998051 340 10 2 501 3R:4391686-4391779 7 310.5 2229 FBgn0037241 543.83 41.31666667 62.96 0.570950481 7.515127067 4.931702668 3 3 3 0.25 dme-miR-305-5p 8mer-m1 AGTACAAT 3R 4391906 4391913 + 3R_4391906_4391913_+ 0.503728306 0.449697842 0.476713074 0.038205333 CG14646 FBtr0078919|FBtr0302339 4391706|4391706 4392111|4391999 3R + 4391853 4391997 3'utr CG14646 FlyBase G39981.1 CACTTTTTAATACTTTAACAATCTAAGCAATCCTAATATTTTTATTTTACTTAAGTACAATTGATCTAAGCATAGACAGAAAGAGTGTTCATATGAGAAATATGCCTTAATATGCTCTGCATAGGAAACCTGTAGTGCAATAAGT 66 4391914 0.979407576 17 66 464 1 1.886490725 0.311688312 0.151515152 0.272727273 66 0 0 77 3R:4391853-4391997 8 CG14646 FBtr0302339|FBtr0078919 4391706|4391706 4391999|4392111 AGTACAAT 8mer-m1 dme-miR-305-5p 3R + 4391896 4391977 3'utr CG14646 FlyBase G30193.1 ATTTTACTTAAGTACAATTGATCTAAGCATAGACAGAAAGAGTGTTCATATGAGAAATATGCCTTAATATGCTCTGCATAGG 29 4391914 0.822069698 10 29 176 1 1.681241237 0.229166667 0.586206897 0.75 29 0 0 48 3R:4391896-4391977 8 20.5 2230 FBgn0037241 543.83 41.31666667 62.96 0.037695603 0.49616781 0.325603558 -8 -8 -8 0.25 dme-miR-965-3p 6mer2-7 ACGCTT 3R 4406576 4406581 + 3R_4406576_4406581_+ 0.498572225 0.481777316 0.490174771 0.011875788 lost FBtr0078921 4406254 4407182 3R + 4406556 4406604 3'utr lost FlyBase G40000.1 AACGAGAACACAAATCATTGACGCTTTTTCTAAACAATTGCATTTGTTT 19 4406574 0.986775884 5 18 154 0.958333333 1.361727836 0 0.210526316 0.375 19 1 0 23 3R:4406556-4406604 6 lost FBtr0078921 4406254 4407182 ACGCTT 6mer2-7 dme-miR-965-3p 3R + 4406558 4406605 3'utr lost FlyBase G30215.1 CGAGAACACAAATCATTGACGCTTTTTCTAAACAATTGCATTTGTTTT 18 4406574 0.941683695 7 16 153 0.888888889 1.380211242 0 0.388888889 0.592592593 18 3 0 24 3R:4406558-4406605 6 15 2231 FBgn0263594 9369.39 424.1766667 652.24 0.001600958 0.035362624 0.02299767 2 2 2 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 4423176 4423182 - 3R_4423176_4423182_- 0.531901986 0.475308182 0.503605084 0.04001786 srl FBtr0301244|FBtr0301244|FBtr0301244|FBtr0078946|FBtr0078946|FBtr0078946|FBtr0336458|FBtr0336458|FBtr0336458 4422886|4422886|4422886|4422481|4422481|4422481|4422886|4422886|4422886 4423464|4423464|4423464|4423464|4423464|4423464|4423464|4423464|4423464 3R - 4423135 4423300 3'utr srl FlyBase G47814.1 CTTAAAATAGTTGACAGAGCTATACAATGCAAGCAATAAAAACATTGCAATGTACATTAGGATAATTGTAATTACCGTGAAGGAAACCTAACAACAAGAATTGAAAAGAAAATGAAATTGTGATAACCGCGTAATGCATACAAAGTCATTTAAAGCACGTAAGTTA 223 4423183 0.960075895 21 210 1122 0.945525292 1.431363764 0.186770428 0.139013453 0.252918288 223 6 8 243 3R:4423135-4423300 7 srl FBtr0336458|FBtr0336458|FBtr0336458|FBtr0301244|FBtr0301244|FBtr0301244|FBtr0078946|FBtr0078946|FBtr0078946 4422886|4422886|4422886|4422886|4422886|4422886|4422481|4422481|4422481 4423464|4423464|4423464|4423464|4423464|4423464|4423464|4423464|4423464 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 4423154 4423357 3'utr srl FlyBase G36072.1 AATTTCCGAAGTCTCTATCTATAAACCTGAGAAGCCTGATTACAATTCTTAATTTATCTTAAAATAGTTGACAGAGCTATACAATGCAAGCAATAAAAACATTGCAATGTACATTAGGATAATTGTAATTACCGTGAAGGAAACCTAACAACAAGAATTGAAAAGAAAATGAAATTGTGATAACCGCGTAATGCATACAAAGTC 169 4423183 0.829477446 19 157 848 0.95 1.915575699 0.157692308 0.426035503 0.626923077 169 11 2 247 3R:4423154-4423357 7 136.5 2232 FBgn0037248 2796.273333 78.52666667 121.16 0.04881497 1.73826301 1.126609442 1 1 1 0.25 dme-miR-79-3p 6mer2-7 AGCTTT 3R 4465433 4465438 - 3R_4465433_4465438_- 0.702299469 0.738189104 0.720244287 0.02537778 CG31523 FBtr0078938|FBtr0078935|FBtr0335430|FBtr0335429|FBtr0078937|FBtr0345142|FBtr0078936 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 3R - 4465419 4465571 3'utr CG31523 FlyBase G47867.1 TCAGCGCAGTGAGAAGTATTGGTGACAAATTATTTGTAAGTGTAATTCTGTCTGTTAATCCGTGCGTATGGTTTCGTTGTTAGATTATGTGGCTTAAGCTGACAAGTTCAAAAACTATAGAAAACCTAAATAAAGCTTTTTAATTTATATTAA 58 4465432 0.984281754 19 56 448 0.970588235 1.819543936 0.205882353 0.155172414 0.279411765 58 2 0 66 3R:4465419-4465571 6 CG31523 FBtr0335429|FBtr0335430|FBtr0078935|FBtr0078938|FBtr0078936|FBtr0345142|FBtr0078937 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 AGCTTT 6mer2-7 dme-miR-79-3p 3R - 4465418 4465571 3'utr CG31523 FlyBase G36112.1 TCAGCGCAGTGAGAAGTATTGGTGACAAATTATTTGTAAGTGTAATTCTGTCTGTTAATCCGTGCGTATGGTTTCGTTGTTAGATTATGTGGCTTAAGCTGACAAGTTCAAAAACTATAGAAAACCTAAATAAAGCTTTTTAATTTATATTAAA 39 4465432 0.987187196 17 35 313 0.951612903 1.469822016 0.193548387 0.384615385 0.612903226 39 2 1 59 3R:4465418-4465571 6 16.5 2233 FBgn0051523 3326.983333 148.2633333 227.5733333 0.004959448 0.111288473 0.072504101 -6 -6 -6 0.25 dme-miR-79-3p 6mer2-7 AGCTTT 3R 4465781 4465786 - 3R_4465781_4465786_- 0.999349084 0.764803477 0.88207628 0.165848784 CG31523 FBtr0078938|FBtr0078935|FBtr0335430|FBtr0335429|FBtr0078937|FBtr0345142|FBtr0078936 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 3R - 4465750 4465802 3'utr CG31523 FlyBase G47868.1 AAGATCATGGAGATAAAGCTTTTATACTGTAAGTGCAAACCGGCTTAAGGACG 8 4465781 0.982255773 5 8 62 1 0.903089987 0.25 0 0 8 0 0 8 3R:4465750-4465802 6 CG31523 FBtr0335429|FBtr0335430|FBtr0078935|FBtr0078938|FBtr0078936|FBtr0345142|FBtr0078937 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 AGCTTT 6mer2-7 dme-miR-79-3p 3R - 4465745 4465812 3'utr CG31523 FlyBase G36113.1 AAGAGTGACAAAGATCATGGAGATAAAGCTTTTATACTGTAAGTGCAAACCGGCTTAAGGACGAAGAC 8 4465773 0.974210484 6 7 46 0.9 0.954242509 0.2 0.25 0.4 8 1 0 9 3R:4465745-4465812 6 6 2234 FBgn0051523 3326.983333 148.2633333 227.5733333 0.001803436 0.040468536 0.026365128 -5 -13 -9 0.25 dme-miR-92b-3p 7mer-A1 TGCAATA 3R 4465969 4465975 - 3R_4465969_4465975_- 0.766152715 0.610087804 0.68812026 0.110354549 CG31523 FBtr0078938|FBtr0078935|FBtr0335430|FBtr0335429|FBtr0078937|FBtr0345142|FBtr0078936 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 3R - 4465947 4466000 3'utr CG31523 FlyBase G47870.1 ATATTGAGAGAGAACGGCATTTTGTTGCAATACTTTGTAAAGGTCTAATAGTTA 14 4465979 0.985731281 7 13 105 0.9375 1.176091259 0.1875 0.071428571 0.1875 14 1 0 15 3R:4465947-4466000 7 CG31523 FBtr0335429|FBtr0335430|FBtr0078935|FBtr0078938|FBtr0078936|FBtr0345142|FBtr0078937 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 TGCAATA 7mer-A1 dme-miR-92b-3p 3R - 4465958 4466004 3'utr CG31523 FlyBase G36115.1 TTGTATATTGAGAGAGAACGGCATTTTGTTGCAATACTTTGTAAAGG 5 4465980 0.966410597 3 5 33 1 0.84509804 0 0.2 0.428571429 5 0 0 7 3R:4465958-4466004 7 6.5 2235 FBgn0051523 3326.983333 148.2633333 227.5733333 0.001953722 0.043840914 0.028562222 4 5 4.5 0.25 dme-miR-2b-2-5p 8mer-A1 TTGAAGAA 3R 4466612 4466619 - 3R_4466612_4466619_- 0.464697876 0.484128991 0.474413433 0.013739863 CG31523 FBtr0078938|FBtr0078935|FBtr0335430|FBtr0335429|FBtr0078937|FBtr0345142|FBtr0078936 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 3R - 4466553 4466817 stop_codon CG31523 FlyBase G47873.1 AAGCAAGGGGCAATCGAATGGTGCCTACAAGGAGGGCTTCTTCAAGGAGGGCGTGTTATCCAACAACGATGCCATCTTCAACCCGGACAGCAGTAGTTCTAGTCTGCACCAGCGCAAAGTCAAATAACTGCTGATTAGGTGTACTACGATGATATTCATTATGTTTATGTTAAGTGATTAGCGTGTAACTGAACCAGATTGAAGAACAAGACGAGCAAGAAACTTGGCAGAAGTAGCAGAAGACGATTGGCACGACAGCAGCGAA 410 4466619 0.96314446 35 384 1963 0.936440678 1.800324229 0.177966102 0.136585366 0.25 410 24 6 442 3R:4466553-4466817 8 CG31523 FBtr0335429|FBtr0335430|FBtr0078935|FBtr0078938|FBtr0078936|FBtr0345142|FBtr0078937 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 TTGAAGAA 8mer-A1 dme-miR-2b-2-5p 3R - 4466554 4466756 stop_codon CG31523 FlyBase G36118.1 AACAACGATGCCATCTTCAACCCGGACAGCAGTAGTTCTAGTCTGCACCAGCGCAAAGTCAAATAACTGCTGATTAGGTGTACTACGATGATATTCATTATGTTTATGTTAAGTGATTAGCGTGTAACTGAACCAGATTGAAGAACAAGACGAGCAAGAAACTTGGCAGAAGTAGCAGAAGACGATTGGCACGACAGCAGCGA 267 4466619 0.961991588 27 239 1210 0.894484412 1.45776548 0.189448441 0.4082397 0.621103118 267 32 12 373 3R:4466554-4466756 8 96 2236 FBgn0051523 3326.983333 148.2633333 227.5733333 0.028854969 0.647496571 0.421842044 0 0 0 0.25 dme-bantam-3p 6mer3-8 TGATCT 3R 4492581 4492586 - 3R_4492581_4492586_- 0.605224875 0.754619366 0.67992212 0.105637864 CG34357 FBtr0303867|FBtr0335239 4492524|4491941 4493403|4493403 3R - 4492568 4492602 3'utr CG34357 FlyBase G47888.1 GACATGGGTAGATTGCTGATCTTAATAAAATATTA 23 4492587 0.724694815 5 22 184 0.962962963 1.113943352 0.37037037 0.173913043 0.296296296 23 0 1 26 3R:4492568-4492602 6 CG34357 FBtr0335239|FBtr0303867 4491941|4492524 4493403|4493403 TGATCT 6mer3-8 dme-bantam-3p 3R - 4492562 4492609 3'utr CG34357 FlyBase G36129.1 GGCTGACGACATGGGTAGATTGCTGATCTTAATAAAATATTATTATTT 14 4492587 0.985948719 6 13 111 0.947368421 1.255272505 0.473684211 0.285714286 0.473684211 14 1 0 18 3R:4492562-4492609 6 18.5 2237 FBgn0085386 22.73666667 0.763333333 1.17 0.813663686 24.23580786 15.81196581 1 1 1 0.25 dme-miR-8-3p 6mer3-8 CAGTAT 3R 4638351 4638356 - 3R_4638351_4638356_- 0.914560308 0.97228372 0.943422014 0.040816608 CG9775 FBtr0301297 4638008 4638430 3R - 4638310 4638388 stop_codon CG9775 FlyBase G47907.1 TTAAGCGCGAGGATCTTGACATGGAACTGGATCAGTATATGTCCACCACTAAGTCGGAGATGGACTACTTGCTGAAGTA 25 4638357 0.964787478 9 23 142 0.928571429 1.414973348 0.142857143 0.04 0.142857143 25 2 0 26 3R:4638310-4638388 6 CG9775 FBtr0301297 4638008 4638430 CAGTAT 6mer3-8 dme-miR-8-3p 3R - 4638312 4638385 3'utr CG9775 FlyBase G36142.1 AGCGCGAGGATCTTGACATGGAACTGGATCAGTATATGTCCACCACTAAGTCGGAGATGGACTACTTGCTGAAG 16 4638357 0.922163559 5 14 90 0.95 1.278753601 0.15 0.25 0.4 16 1 0 19 3R:4638312-4638385 6 13.5 2238 FBgn0037261 1038.666667 62.08666667 94.64333333 0.012997433 0.21743799 0.142640792 1 1 1 0.25 dme-miR-12-5p 6mer3-8 AATACT 3R 4644659 4644664 - 3R_4644659_4644664_- 0.969173724 0.962946268 0.966059996 0.004403437 Dip2 FBtr0078893 4644647 4644783 3R - 4644644 4644677 3'utr Dip2 FlyBase G47914.1 TACTTGGAGAATAAATACTGATAAATATTAATTA 29 4644665 0.881629115 4 27 216 0.939393939 1.491361694 0.272727273 0.137931034 0.242424242 29 2 0 31 3R:4644644-4644677 6 Dip2 FBtr0078893 4644647 4644783 AATACT 6mer3-8 dme-miR-12-5p 3R - 4644644 4644684 3'utr Dip2 FlyBase G36147.1 TTTATTATACTTGGAGAATAAATACTGATAAATATTAATTA 10 4644664 0.754319206 4 9 74 0.875 1.146128036 0.5 0.5 0.6875 10 2 0 14 3R:4644644-4644684 6 19.5 2239 FBgn0040466 185 25.7 39.05333333 0.105405405 0.758754864 0.499317173 1 0 0.5 0.25 dme-miR-965-3p 7mer-A1 ACGCTTA 3R 4787182 4787188 - 3R_4787182_4787188_- 0.823318106 0.822936675 0.82312739 0.000269691 ctrip FBtr0301437|FBtr0303914|FBtr0344030|FBtr0334903|FBtr0303911|FBtr0303917|FBtr0303915|FBtr0303912|FBtr0334902|FBtr0344028|FBtr0344029 4787043|4787043|4787043|4786282|4787043|4787043|4787043|4787043|4786282|4787043|4786282 4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826 3R - 4787125 4787217 3'utr ctrip FlyBase G47951.1 AATTATTTGTAAGCATACAATGTGCATAAACGCTTATTAGAAAGAAACGTGAATGAAAATACAATGAAGGGGAAACACTGAAGCATTGGAGGT 125 4787181 0.892332085 13 119 664 0.972789116 2.155336037 0.142857143 0.152 0.278911565 125 4 0 143 3R:4787125-4787217 7 ctrip FBtr0344029|FBtr0344028|FBtr0334902|FBtr0303915|FBtr0303912|FBtr0303917|FBtr0303911|FBtr0334903|FBtr0344030|FBtr0303914|FBtr0301437 4786282|4787043|4786282|4787043|4787043|4787043|4787043|4786282|4787043|4787043|4787043 4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826 ACGCTTA 7mer-A1 dme-miR-965-3p 3R - 4787126 4787207 3'utr ctrip FlyBase G36179.1 AAGCATACAATGTGCATAAACGCTTATTAGAAAGAAACGTGAATGAAAATACAATGAAGGGGAAACACTGAAGCATTGGAGG 76 4787181 0.889613743 8 71 391 0.943396226 2 0.20754717 0.355263158 0.537735849 76 6 0 100 3R:4787126-4787207 7 77.5 2240 FBgn0260794 5155.516667 58.3 89.56666667 0.015032441 1.329331046 0.865277261 -7 -7 -7 0.25 dme-miR-14-3p 8mer-A1 AAGACTGA 3R 4818773 4818780 - 3R_4818773_4818780_- 0.638225639 0.637406838 0.637816239 0.000578979 CG14657 FBtr0334901|FBtr0078875|FBtr0334900 4818273|4818539|4817978 4820262|4819106|4819106 3R - 4818759 4818805 3'utr CG14657 FlyBase G48023.1 ATTACAGAATTCTGGCTTGGTCTTCAAGACTGATATAACAAAAAGCA 76 4818784 0.640526233 9 67 599 0.862068966 1.875061263 0.149425287 0.131578947 0.24137931 76 12 0 75 3R:4818759-4818805 8 CG14657 FBtr0334900|FBtr0078875|FBtr0334901 4817978|4818539|4818273 4819106|4819106|4820262 AAGACTGA 8mer-A1 dme-miR-14-3p 3R - 4818747 4818803 3'utr CG14657 FlyBase G36240.1 TACAGAATTCTGGCTTGGTCTTCAAGACTGATATAACAAAAAGCATCCGCTACGAAT 45 4818784 0.933472837 9 41 351 0.930555556 1.525044807 0.194444444 0.4 0.625 45 4 1 67 3R:4818747-4818803 8 56 2241 FBgn0037282 892.63 37.31666667 57.47333333 0.06273596 1.500669942 0.974364923 4 4 4 0.25 dme-miR-184-5p 6mer2-7 GATAAG 3R 4818915 4818920 - 3R_4818915_4818920_- 0.516093533 0.72740136 0.621747447 0.149417249 CG14657 FBtr0334901|FBtr0078875|FBtr0334900 4818273|4818539|4817978 4820262|4819106|4819106 3R - 4818871 4818959 3'utr CG14657 FlyBase G48024.1 ACGTAATACATATTTCCGTTGAAGTAGGTGGAAATGTAAGATAAGCCAGTAATCATGTAAAGTACACGTAGTGTTCAACTCGTTTCGTA 31 4818925 0.959341189 5 30 138 0.972222222 1.544068044 0.277777778 0.129032258 0.25 31 1 0 35 3R:4818871-4818959 6 CG14657 FBtr0334900|FBtr0078875|FBtr0334901 4817978|4818539|4818273 4819106|4819106|4820262 GATAAG 6mer2-7 dme-miR-184-5p 3R - 4818906 4818947 3'utr CG14657 FlyBase G36241.3 TTTCCGTTGAAGTAGGTGGAAATGTAAGATAAGCCAGTAATC 23 4818924 0.820315852 6 23 104 1 1.544068044 0.257142857 0.434782609 0.628571429 23 0 0 35 3R:4818906-4818947 6 24 2242 FBgn0037282 892.63 37.31666667 57.47333333 0.02688684 0.643144261 0.417584967 5 4 4.5 0.25 dme-miR-14-3p 7mer-A1 AGACTGA 3R 4938248 4938254 + 3R_4938248_4938254_+ 0.823349223 0.821088912 0.822219068 0.001598273 Cdep FBtr0336812 4938074 4940218 3R + 4938232 4938258 3'utr Cdep FlyBase G40137.1 AACTTATTTGTAACTGAGACTGATTTA 6 4938243 0.694031952 4 6 52 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3R:4938232-4938258 7 Cdep FBtr0336812 4938074 4940218 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 4938237 4938267 3'utr Cdep FlyBase G30329.1 ATTTGTAACTGAGACTGATTTACGACTAACA 7 4938246 0.827758969 4 7 50 1 1.079181246 0 0.428571429 0.666666667 7 0 0 12 3R:4938237-4938267 7 6.5 2243 FBgn0265082 2047.223333 54.77333333 83.9 0.003175032 0.118670886 0.077473182 5 2 3.5 0.25 dme-miR-34-5p 7mer-A1 ACTGCCA 3R 5226951 5226957 + 3R_5226951_5226957_+ 0.815531886 0.817081895 0.81630689 0.001096016 Vps37B FBtr0078777|FBtr0305002 5226913|5226913 5227526|5227526 3R + 5226912 5226989 stop_codon Vps37B FlyBase G40174.1 TGAGGTCTTGGTCCTTGGTCCTTGGTCCTCAGCGAATTAACTGCCATGGCGCATCAGTCTGCAGCAGGCAAGTTTGTA 24 5226971 0.727038355 9 19 142 0.806451613 1.397940009 0.258064516 0.291666667 0.451612903 24 6 0 25 3R:5226912-5226989 7 Vps37B FBtr0078777|FBtr0305002|FBtr0305001 5226913|5226913|5226913 5227526|5227526|5227526 ACTGCCA 7mer-A1 dme-miR-34-5p 3R + 5226912 5226983 stop_codon Vps37B FlyBase G30347.1 TGAGGTCTTGGTCCTTGGTCCTTGGTCCTCAGCGAATTAACTGCCATGGCGCATCAGTCTGCAGCAGGCAAG 20 5226948 0.953393778 10 20 119 1 1.447158031 0.392857143 0.35 0.535714286 20 0 0 28 3R:5226912-5226983 7 12 2244 FBgn0037299 170.3333333 20.86666667 31.67333333 0.070450098 0.575079872 0.378867607 -20 3 -8.5 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 5227334 5227341 - 3R_5227334_5227341_- 0.387703901 0.391653895 0.389678898 0.002793072 Kat60 FBtr0078827|FBtr0334909 5227287|5227287 5227991|5227991 3R - 5227314 5227441 3'utr Kat60 FlyBase G48076.1 ATATATCATAGTTTAGTGCAGGCAGAGATGTGTGTACCAGAAAGTTCCCTCTGATTTGCAATTAACCCACTGTAATCAGAAGATGAAACTGAAGCAATATGTACTTAAAGAGAGGATTCTGAAATTTT 473 5227342 0.729365226 20 464 2411 0.980251346 2.737192643 0.122082585 0.143763214 0.272890485 473 11 0 546 3R:5227314-5227441 8 Kat60 FBtr0334909|FBtr0078827 5227287|5227287 5227991|5227991 GTACTTAA 8mer-A1 dme-miR-252-5p 3R - 5227307 5227373 3'utr Kat60 FlyBase G36284.1 ACTGTAATCAGAAGATGAAACTGAAGCAATATGTACTTAAAGAGAGGATTCTGAAATTTTAAACAAT 314 5227342 0.728860425 11 300 1623 0.953333333 2.331427297 0.111111111 0.340764331 0.54 314 20 1 429 3R:5227307-5227373 8 359 2245 FBgn0040208 671.9533333 31.69333333 48.73 0.534263292 11.32730332 7.367124974 1 1 1 0.25 dme-miR-1003-3p 6mer3-8 ATGTGA 3R 5227448 5227453 + 3R_5227448_5227453_+ 0.441103538 0.962014337 0.701558937 0.368339559 Vps37B FBtr0078777|FBtr0305002 5226913|5226913 5227526|5227526 3R + 5227336 5227470 coding-3'utr Vps37B FlyBase G40176.1 AAGTACATATTGCTTCAGTTTCATCTTCTGATTACAGTGGGTTAATTGCAAATCAGAGGGAACTTTCTGGTACACACATCTCTGCCTGCACTAAACTATGATATATATGTATATGTGAAAGTATAAATTAAGCGA 56 5227446 0.984861482 18 53 424 0.953125 1.484299839 0.21875 0.107142857 0.21875 56 2 1 61 3R:5227336-5227470 6 Vps37B FBtr0078777|FBtr0305002|FBtr0305001 5226913|5226913|5226913 5227526|5227526|5227526 ATGTGA 6mer3-8 dme-miR-1003-3p 3R + 5227372 5227469 3'utr Vps37B FlyBase G30350.1 GTGGGTTAATTGCAAATCAGAGGGAACTTTCTGGTACACACATCTCTGCCTGCACTAAACTATGATATATATGTATATGTGAAAGTATAAATTAAGCG 41 5227447 0.987656272 13 33 295 0.810344828 1.371067862 0.413793103 0.365853659 0.551724138 41 10 1 47 3R:5227372-5227469 6 26.5 2246 FBgn0037299 170.3333333 20.86666667 31.67333333 0.155577299 1.269968051 0.836665965 2 1 1.5 0.25 dme-miR-277-3p 7mer-m8 TGCATTT 3R 5236189 5236195 + 3R_5236189_5236195_+ 0.53327173 0.619145035 0.576208382 0.060721593 Mms19 FBtr0078778 5236033 5236288 3R + 5236149 5236204 3'utr Mms19 FlyBase G40186.1 TTTGGAAAAAGCAAAATTATAAAGTAAACGCGAAATTGTATGCATTTTATATTACT 15 5236185 0.990857872 4 14 147 0.9375 1.176091259 0.0625 0.066666667 0.125 15 1 0 15 3R:5236149-5236204 7 Mms19 FBtr0078778 5236033 5236288 TGCATTT 7mer-m8 dme-miR-277-3p 3R + 5236160 5236200 3'utr Mms19 FlyBase G30357.1 CAAAATTATAAAGTAAACGCGAAATTGTATGCATTTTATAT 14 5236185 0.76767203 4 14 133 1 1.322219295 0 0.285714286 0.523809524 14 0 0 21 3R:5236160-5236200 7 14 2247 FBgn0037301 547.33 20.46333333 31.32 0.025578719 0.684150513 0.446998723 4 4 4 0.25 dme-miR-33-5p 6mer3-8 CAATGC 3R 5397500 5397505 + 3R_5397500_5397505_+ 0.856995131 0.810723414 0.833859272 0.032719033 CG1172 FBtr0309312|FBtr0333810 5396179|5396179 5397614|5399510 3R + 5397484 5397521 3'utr CG1172 FlyBase G40230.1 ACACTGTGCGAAAGTGCAATGCCAAAGTTGAAATAAAT 22 5397501 0.776059234 5 21 93 0.923076923 1.380211242 0.307692308 0.181818182 0.307692308 22 2 0 24 3R:5397484-5397521 6 CG1172 FBtr0333810|FBtr0309312 5396179|5396179 5399510|5397614 CAATGC 6mer3-8 dme-miR-33-5p 3R + 5397487 5397532 3'utr CG1172 FlyBase G30399.1 CTGTGCGAAAGTGCAATGCCAAAGTTGAAATAAATATTGATGGGTG 6 5397502 0.931761248 4 6 26 1 0.954242509 0.444444444 0.5 0.666666667 6 0 0 9 3R:5397487-5397532 6 12.5 2248 FBgn0264712 391.6633333 23.33 36.07 0.031915165 0.535790827 0.346548378 -1 -2 -1.5 0.25 dme-miR-307a-3p 8mer-A1 GGTTGTGA 3R 5458900 5458907 - 3R_5458900_5458907_- 0.543782041 0.546559548 0.545170795 0.001963989 PEK FBtr0078770|FBtr0330027|FBtr0330026 5458561|5458561|5458561 5459391|5459391|5459391 3R - 5458883 5458928 3'utr PEK FlyBase G48172.1 CTAATTGCCCATAGAGATAATGGTTGTGACTAATCGCTTGGCATAC 70 5458908 0.798438518 3 67 491 0.953488372 1.436692598 0.093023256 0.171428571 0.325581395 70 2 2 82 3R:5458883-5458928 8 PEK FBtr0330027|FBtr0330026|FBtr0078770 5458561|5458561|5458561 5459391|5459391|5459391 GGTTGTGA 8mer-A1 dme-miR-307a-3p 3R - 5458884 5458924 3'utr PEK FlyBase G36375.1 TTGCCCATAGAGATAATGGTTGTGACTAATCGCTTGGCATA 55 5458908 0.796734868 3 53 371 0.975609756 1.903089987 0.158536585 0.381818182 0.585365854 55 2 0 80 3R:5458884-5458924 8 62.5 2249 FBgn0037327 1339.34 35.69 54.59666667 0.046664775 1.75119081 1.144758532 1 1 1 0.25 dme-miR-92b-3p 6mer3-8 GTGCAA 3R 5469515 5469520 + 3R_5469515_5469520_+ 0.552587123 0.716900161 0.634743642 0.116186907 CG12162 FBtr0078680|FBtr0078681 5469438|5469438 5469539|5469566 3R + 5469497 5469534 3'utr CG12162 FlyBase G40235.1 CATGCGTACATGTGTTTAGTGCAAATTACAATAATCAA 20 5469511 0.713485644 3 20 169 1 1.322219295 0 0.05 0.095238095 20 0 0 21 3R:5469497-5469534 6 CG12162 FBtr0078681|FBtr0078680 5469438|5469438 5469566|5469539 GTGCAA 6mer3-8 dme-miR-92b-3p 3R + 5469493 5469532 3'utr CG12162 FlyBase G30403.1 AATGCATGCGTACATGTGTTTAGTGCAAATTACAATAATC 13 5469512 0.740069938 3 13 107 1 1.361727836 0 0.461538462 0.695652174 13 0 0 23 3R:5469493-5469532 6 16.5 2250 FBgn0037329 203.12 15.37666667 23.49666667 0.081232769 1.073054411 0.702227266 4 3 3.5 0.25 dme-miR-12-5p 6mer3-8 AATACT 3R 5485107 5485112 + 3R_5485107_5485112_+ 0.425720726 0.434580667 0.430150696 0.006264966 Hcs FBtr0078683|FBtr0345254|FBtr0345253|FBtr0336769 5484906|5484906|5484906|5484906 5485393|5485393|5485393|5485393 3R + 5485098 5485146 3'utr Hcs FlyBase G40256.1 ACTAAATTAAATACTGCCAAAGAGAATTATATGTTAAAGGAAGTCTCAA 12 5485111 0.958529711 4 12 57 1 1.176091259 0.066666667 0.166666667 0.333333333 12 0 0 15 3R:5485098-5485146 6 Hcs FBtr0345253|FBtr0336769|FBtr0078683|FBtr0345254 5484906|5484906|5484906|5484906 5485393|5485393|5485393|5485393 AATACT 6mer3-8 dme-miR-12-5p 3R + 5485092 5485124 3'utr Hcs FlyBase G30417.1 TAATCCACTAAATTAAATACTGCCAAAGAGAAT 7 5485111 0.938792776 2 7 31 1 0.84509804 0.285714286 0 0 7 0 0 7 3R:5485092-5485124 6 8.5 2251 FBgn0037332 392.2933333 11.98 18.24666667 0.02166746 0.70951586 0.465838509 -4 -4 -4 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 5540463 5540468 - 3R_5540463_5540468_- 0.956630031 0.971348763 0.963989397 0.010407763 CG2519 FBtr0078761|FBtr0336771|FBtr0078762 5539508|5539508|5539508 5541031|5541031|5541031 3R - 5540452 5540483 3'utr CG2519 FlyBase G48229.1 ATGAGATTTTTCTTTGTACCTAACCAACAACA 12 5540469 0.865896085 2 11 94 1 1.176091259 0.333333333 0.166666667 0.333333333 12 0 0 15 3R:5540452-5540483 6 CG2519 FBtr0078762|FBtr0078761|FBtr0336771 5539508|5539508|5539508 5541031|5541031|5541031 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 5540451 5540493 3'utr CG2519 FlyBase G36413.1 AACATAAGCCATGAGATTTTTCTTTGTACCTAACCAACAACAA 16 5540469 0.981978876 3 15 113 1 1.361727836 0 0.375 0.565217391 16 0 0 23 3R:5540451-5540493 6 12.5 2252 FBgn0037336 963.7466667 20.52333333 31.41666667 0.012970213 0.609062855 0.397877984 1 1 1 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3R 5540650 5540656 - 3R_5540650_5540656_- 0.387606501 0.651589879 0.51959819 0.186664452 CG2519 FBtr0078761|FBtr0336771|FBtr0078762 5539508|5539508|5539508 5541031|5541031|5541031 3R - 5540513 5540985 3'utr CG2519 FlyBase G48230.1 TCATATAGATTTCTCGTGGCTGCTCGCTGTTGAAAAAAATCCGTTCTATCGAATGAAATCTCGAATATTGTGTTATTAAAGCGATGTTTTAAAAAGGAATCCGATTGTTCACACAAGAGTCCGAATCTCAATTAGAAAAACAAAATTACAGACCAGGGAACAATCGTAAATACTTCAAATTTTCTTCCCTTCTCAATATGAAATCCAAGGCAGCTAGCTAAAGTGTAATAAGAGCAAATTTATCTAACTATATTTACAGTATATGATATACATATATGATTCGGTAATCTACACCGCATAGGCGAAAAATCGAAAAGTAAAAACTTCAATCTAGTCGCAAGCAAATTTTATGCAGCAATCTAATTCGTTTTCGTATGCAATCTATAGGCATATTCTAATCAAAGCTTCATGACAGTTTTACATCCGAGTTTAGTTTATTGCGATATCCGTTCTAAAAGCCAATAAAGAAACAT 351 5540657 0.980791009 67 305 2176 0.871733967 1.610423555 0.123515439 0.170940171 0.308788599 351 46 8 367 3R:5540513-5540985 7 CG2519 FBtr0078762|FBtr0078761|FBtr0336771 5539508|5539508|5539508 5541031|5541031|5541031 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3R - 5540623 5540671 3'utr CG2519 FlyBase G36415.1 AAGTAAAAACTTCAATCTAGTCGCAAGCAAATTTTATGCAGCAATCTAA 44 5540659 0.765630006 6 39 226 0.915492958 1.511883361 0.028169014 0.409090909 0.633802817 44 5 1 65 3R:5540623-5540671 7 49 2253 FBgn0037336 963.7466667 20.52333333 31.41666667 0.050843237 2.387526393 1.559681698 1 3 2 0.25 dme-miR-980-3p 8mer-A1 GGCAGCTA 3R 5540770 5540777 - 3R_5540770_5540777_- 0.643751724 0.642722719 0.643237221 0.000727613 CG2519 FBtr0078761|FBtr0336771|FBtr0078762 5539508|5539508|5539508 5541031|5541031|5541031 3R - 5540513 5540985 3'utr CG2519 FlyBase G48230.1 TCATATAGATTTCTCGTGGCTGCTCGCTGTTGAAAAAAATCCGTTCTATCGAATGAAATCTCGAATATTGTGTTATTAAAGCGATGTTTTAAAAAGGAATCCGATTGTTCACACAAGAGTCCGAATCTCAATTAGAAAAACAAAATTACAGACCAGGGAACAATCGTAAATACTTCAAATTTTCTTCCCTTCTCAATATGAAATCCAAGGCAGCTAGCTAAAGTGTAATAAGAGCAAATTTATCTAACTATATTTACAGTATATGATATACATATATGATTCGGTAATCTACACCGCATAGGCGAAAAATCGAAAAGTAAAAACTTCAATCTAGTCGCAAGCAAATTTTATGCAGCAATCTAATTCGTTTTCGTATGCAATCTATAGGCATATTCTAATCAAAGCTTCATGACAGTTTTACATCCGAGTTTAGTTTATTGCGATATCCGTTCTAAAAGCCAATAAAGAAACAT 351 5540784 0.980791009 67 305 2176 0.871733967 1.610423555 0.123515439 0.170940171 0.308788599 351 46 8 367 3R:5540513-5540985 8 CG2519 FBtr0078762|FBtr0078761|FBtr0336771 5539508|5539508|5539508 5541031|5541031|5541031 GGCAGCTA 8mer-A1 dme-miR-980-3p 3R - 5540748 5540871 3'utr CG2519 FlyBase G36417.1 AAGAGTCCGAATCTCAATTAGAAAAACAAAATTACAGACCAGGGAACAATCGTAAATACTTCAAATTTTCTTCCCTTCTCAATATGAAATCCAAGGCAGCTAGCTAAAGTGTAATAAGAGCAAA 106 5540782 0.854997342 22 90 520 0.838709677 1.414973348 0.064516129 0.349056604 0.55483871 106 21 4 130 3R:5540748-5540871 8 85.5 2254 FBgn0037336 963.7466667 20.52333333 31.41666667 0.08871626 4.16598993 2.721485411 7 5 6 0.25 dme-miR-970-3p 6mer3-8 TCTTAT 3R 5570196 5570201 + 3R_5570196_5570201_+ 0.999518571 0.999977806 0.999748188 0.000324703 Rheb FBtr0078694|FBtr0078693 5570116|5570116 5570491|5570491 3R + 5570140 5570294 3'utr Rheb FlyBase G40293.1 CGGCCGAACTGTTGGAAATACGGCAAATCGCTATGGCAATACGAAAATCGATTATCTCTTATCTACACAGTTGGGTCAGCGTGCATGGCGGGGCCGTACCCTTTGTGCGCAGCAGGAAAATCTAAAAATCTAATAGACCTAGTATTCTTAAGACC 61 5570198 0.983994104 16 59 455 0.96969697 1.505149978 0.075757576 0.081967213 0.151515152 61 1 1 64 3R:5570140-5570294 6 Rheb FBtr0078694|FBtr0078693 5570116|5570116 5570491|5570491 TCTTAT 6mer3-8 dme-miR-970-3p 3R + 5570180 5570247 3'utr Rheb FlyBase G30441.1 ACGAAAATCGATTATCTCTTATCTACACAGTTGGGTCAGCGTGCATGGCGGGGCCGTACCCTTTGTGC 25 5570191 0.983910273 7 24 185 0.954545455 1.62324929 0 0.6 0.772727273 25 2 0 42 3R:5570180-5570247 6 30.5 2255 FBgn0041191 427.6933333 44.04666667 67.49 0.071312779 0.692447404 0.451918803 -2 5 1.5 0.25 dme-miR-282-5p 7mer-A1 GAGGCTA 3R 5582119 5582125 - 3R_5582119_5582125_- 0.80202907 0.802152069 0.802090569 8.70E-05 CG2926 FBtr0336762 5579299 5584787 3R - 5582099 5582179 5'utr CG2926 FlyBase G48289.1 ATTTGCAGTGCTGTGGGAGCAGTAAAGAAGACGAAGCGCAAGCGTAAAAAGTTGGAGGCTAAGCCAGTGGCTATCATCGAT 123 5582127 0.951597146 7 121 561 0.978571429 2.136720567 0.428571429 0.12195122 0.228571429 123 3 0 137 3R:5582099-5582179 7 CG2926 FBtr0336762 5579299 5584787 GAGGCTA 7mer-A1 dme-miR-282-5p 3R - 5582099 5582148 5'utr CG2926 FlyBase G36458.1 CGAAGCGCAAGCGTAAAAAGTTGGAGGCTAAGCCAGTGGCTATCATCGAT 87 5582127 0.817003252 4 83 401 0.944444444 2.075546961 0.531746032 0.356321839 0.555555556 87 7 0 119 3R:5582099-5582148 7 101.5 2256 FBgn0037344 2023.256667 29.51333333 45.14 0.050166646 3.43912356 2.248560035 2 2 2 0.25 dme-miR-305-5p 8mer-m1 AGTACAAT 3R 5584645 5584652 - 3R_5584645_5584652_- 0.570117591 0.570325933 0.570221762 0.00014729 CG2926 FBtr0336762 5579299 5584787 3R - 5584595 5584680 intron-5'utr CG2926 FlyBase G48294.1 AGGATGATGACGATATGAATGAAGATTTAGTACAATTAGATGATGATGATGAGGATACGGATATACCATTGCCTTTGGGGCCTGAG 52 5584654 0.724643409 14 52 383 1 1.763427994 0.172413793 0.115384615 0.206896552 52 0 0 58 3R:5584595-5584680 8 CG2926 FBtr0336762 5579299 5584787 AGTACAAT 8mer-m1 dme-miR-305-5p 3R - 5584534 5584670 5'utr CG2926 FlyBase G36463.1 CGATATGAATGAAGATTTAGTACAATTAGATGATGATGATGAGGATACGGATATACCATTGCCTTTGGGGCCTGAGCCCGAACCCGTTCCCGAAAAAGTCCCGAAAAGTAGTGATGATGACCTCTACGAGCCAGAGA 40 5584654 0.955552208 15 34 251 0.85 1.008600172 0.316666667 0.375 0.583333333 40 5 4 51 3R:5584534-5584670 8 31.5 2257 FBgn0037344 2023.256667 29.51333333 45.14 0.015568959 1.067314208 0.697828977 2 2 2 0.25 dme-miR-79-3p 6mer2-7 AGCTTT 3R 5594277 5594282 + 3R_5594277_5594282_+ 0.661939515 0.640076766 0.65100814 0.015459263 Vha26 FBtr0346137|FBtr0078701|FBtr0078700 5593353|5593353|5593353 5595356|5594699|5594699 3R + 5594245 5594305 3'utr Vha26 FlyBase G40316.1 TAGCTAAGTTTGTTGACCTGACCATCAAGTGCAGCTTTCACACCCTCATATAACTACTTAA 25 5594281 0.961779259 7 20 152 0.827586207 1.380211242 0.103448276 0.16 0.275862069 25 5 0 24 3R:5594245-5594305 6 Vha26 FBtr0078700|FBtr0078701|FBtr0346137 5593353|5593353|5593353 5594699|5594699|5595356 AGCTTT 6mer2-7 dme-miR-79-3p 3R + 5594136 5594299 3'utr Vha26 FlyBase G30454.1 ATGTCTGTTGTTGTTGAGATACCGAGAGTAGAGAATACACACTGCTTAGCACGCGACACTTAATACCCATTCATTACACATGCACCAACGACGATGAAGTTTTGCCAAGTAGCTAAGTTTGTTGACCTGACCATCAAGTGCAGCTTTCACACCCTCATATAACT 29 5594281 0.978436069 12 27 177 0.934782609 1.33243846 0.043478261 0.448275862 0.652173913 29 2 1 43 3R:5594136-5594299 6 16.5 2258 FBgn0015324 3424.973333 191.1566667 292.79 0.004817556 0.086316634 0.056354384 -4 -4 -4 0.25 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 3R 5603024 5603031 + 3R_5603024_5603031_+ 0.672090872 0.631212144 0.651651508 0.028905677 CG1427 FBtr0333279 5601975 5603185 3R + 5603005 5603045 3'utr CG1427 FlyBase G40324.1 GCAGCAACCTGCAAGTTCCGTACCTGACTGTAGCGGCAGGA 7 5603020 0.874591877 3 7 29 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 3R:5603005-5603045 8 CG1427 FBtr0333279 5601975 5603185 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R + 5602988 5603045 intron-3'utr CG1427 FlyBase G30458.1 AGATTTCGGCTCCCACCGCAGCAACCTGCAAGTTCCGTACCTGACTGTAGCGGCAGGA 5 5603035 0.972291768 3 4 24 0.857142857 0.77815125 0.285714286 0.4 0.571428571 5 1 0 6 3R:5602988-5603045 8 5.5 2259 FBgn0037347 155.3333333 12.17666667 18.71333333 0.035407725 0.451683548 0.293908087 4 -11 -3.5 0.25 dme-miR-7-5p 6mer3-8 GTCTTC 3R 5640367 5640372 - 3R_5640367_5640372_- 0.980099997 0.767591332 0.873845664 0.150266343 MTA1-like FBtr0078733|FBtr0290206|FBtr0078734 5639117|5638653|5639117 5640428|5640428|5640428 3R - 5640353 5640393 3'utr MTA1-like FlyBase G48371.1 ATCGGCAACCAAGTTGTTATCGTCTTCAGCAAGTAGGTTCG 8 5640374 0.707407518 2 5 47 0.666666667 0.77815125 0.111111111 0.125 0.222222222 8 3 0 6 3R:5640353-5640393 6 MTA1-like FBtr0078734|FBtr0290206|FBtr0078733 5639117|5638653|5639117 5640428|5640428|5640428 GTCTTC 6mer3-8 dme-miR-7-5p 3R - 5640347 5640383 3'utr MTA1-like FlyBase G36518.1 AAGTTGTTATCGTCTTCAGCAAGTAGGTTCGAGCAGC 8 5640374 0.983903798 2 8 61 1 1.041392685 0 0.375 0.545454545 8 0 0 11 3R:5640347-5640383 6 7 2260 FBgn0027951 1255.973333 34.05666667 52.26666667 0.005573367 0.205539787 0.133928571 2 2 2 0.25 dme-miR-968-5p 8mer-A1 ACTACTTA 3R 5678828 5678835 + 3R_5678828_5678835_+ 0.599315536 0.574386875 0.586851205 0.017627182 Atg17 FBtr0078716|FBtr0334946 5678800|5678800 5679930|5679930 3R + 5678812 5678868 3'utr Atg17 FlyBase G40433.1 TTGGGACTAACATATAACTACTTATATACATAAACGGAGTGTGTATCTAGGCTAAAT 17 5678836 0.77576922 5 14 122 0.823529412 0.84509804 0.411764706 0 0 17 2 1 14 3R:5678812-5678868 8 Atg17 FBtr0334946|FBtr0078716 5678800|5678800 5679930|5679930 ACTACTTA 8mer-A1 dme-miR-968-5p 3R + 5678793 5678892 stop_codon Atg17 FlyBase G30533.1 TCCGAGTAGTGTACGACAGTTGGGACTAACATATAACTACTTATATACATAAACGGAGTGTGTATCTAGGCTAAATCTTGTACTCTATGTAGGAACCGCA 22 5678836 0.977926325 8 19 127 0.9 1.431363764 0.366666667 0.318181818 0.5 22 3 0 27 3R:5678793-5678892 8 12 2261 FBgn0037363 1350.75 25.94 39.87666667 0.008883953 0.462606014 0.300927861 -8 -8 -8 0.25 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 5712022 5712028 + 3R_5712022_5712028_+ 0.502379436 0.54186958 0.522124508 0.027923788 plx FBtr0302092|FBtr0302091|FBtr0334947|FBtr0302090|FBtr0334948 5711955|5711955|5711955|5711955|5711955 5712837|5712837|5712837|5712837|5712837 3R + 5712003 5712101 3'utr plx FlyBase G40454.1 AAGGCCCGCCGGCAGAACGGGCAGCTTTCAAACCCAACGCTACTCATAACCTCTTCTGTTGCGGCTTAGATACGATTAACCCAACCTATAAGATACAAA 40 5712049 0.97420217 10 40 246 1 1.707570176 0.176470588 0.175 0.352941176 40 0 0 51 3R:5712003-5712101 7 plx FBtr0302090|FBtr0334948|FBtr0302091|FBtr0334947|FBtr0302092 5711955|5711955|5711955|5711955|5711955 5712837|5712837|5712837|5712837|5712837 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 5712003 5712074 3'utr plx FlyBase G30546.1 AAGGCCCGCCGGCAGAACGGGCAGCTTTCAAACCCAACGCTACTCATAACCTCTTCTGTTGCGGCTTAGATA 27 5712029 0.978762343 7 23 157 0.847826087 1.113943352 0.282608696 0.444444444 0.673913043 27 5 2 39 3R:5712003-5712074 7 7.5 2262 FBgn0261261 331.2833333 6.486666667 9.993333333 0.022639231 1.156217883 0.750500334 -27 -7 -17 0.25 dme-miR-12-5p 7mer-m8 AATACTC 3R 5780371 5780377 + 3R_5780371_5780377_+ 0.64146303 0.639258733 0.640360882 0.001558675 jagn FBtr0078624|FBtr0078625 5780365|5780365 5781308|5780763 3R + 5780357 5780447 stop_codon jagn FlyBase G40487.1 GTTCCAGTAATCTAAATACTCGCCAAACTAGTAAACGCCGGAATGCAGGGCTAGTTGTAAATAATTTGGAAACTTGAAACTAACTCAAAAC 37 5780373 0.830340841 8 35 177 0.94 1.672097858 0.16 0.243243243 0.44 37 3 0 47 3R:5780357-5780447 7 jagn FBtr0078624|FBtr0078625 5780365|5780365 5781308|5780763 AATACTC 7mer-m8 dme-miR-12-5p 3R + 5780360 5780432 stop_codon jagn FlyBase G30566.1 CCAGTAATCTAAATACTCGCCAAACTAGTAAACGCCGGAATGCAGGGCTAGTTGTAAATAATTTGGAAACTTG 28 5780373 0.996941906 5 27 134 0.975609756 1.602059991 0.097560976 0.25 0.487804878 28 1 0 40 3R:5780360-5780432 7 26.5 2263 FBgn0037374 792.6 64.87666667 99.02 0.033434267 0.408467348 0.267622702 -2 -2 -2 0.25 dme-miR-970-3p 6mer3-8 TCTTAT 3R 5780626 5780631 + 3R_5780626_5780631_+ 0.95797432 0.996836601 0.977405461 0.027479796 jagn FBtr0078624|FBtr0078625 5780365|5780365 5781308|5780763 3R + 5780469 5780641 3'utr jagn FlyBase G40488.1 GAAACTATGGTAAACTAAAGTTATGCAGCTGTTAAGGTATCGCACACTTAGTCATACAGGAAGGGAAACATATGGTCGAAACTGAGCGAAGCGTCGGCGGTAAGGTTATTGTTAGTTGAAAGTTAGTTGATACCGTTTTCAAATTGATTAAATAGACTCTTATCCATATACAC 81 5780621 0.986560022 19 78 658 0.98019802 1.51851394 0.089108911 0.222222222 0.376237624 81 0 2 99 3R:5780469-5780641 6 jagn FBtr0078624|FBtr0078625 5780365|5780365 5781308|5780763 TCTTAT 6mer3-8 dme-miR-970-3p 3R + 5780582 5780648 3'utr jagn FlyBase G30568.1 AGTTGAAAGTTAGTTGATACCGTTTTCAAATTGATTAAATAGACTCTTATCCATATACACATGTACA 35 5780621 0.986078145 6 35 295 1 1.662757832 0.043478261 0.285714286 0.456521739 35 0 0 46 3R:5780582-5780648 6 46 2264 FBgn0037374 792.6 64.87666667 99.02 0.058036841 0.709037661 0.464552616 5 5 5 0.25 dme-miR-8-3p 7mer-A1 AGTATTA 3R 5798593 5798599 + 3R_5798593_5798599_+ 0.758975051 0.728414012 0.743694531 0.021609961 CG10979 FBtr0078631|FBtr0335518 5798393|5798393 5798749|5799994 3R + 5798530 5798683 3'utr CG10979 FlyBase G40526.1 AGTGTCCTTATTGTAAAACCAACTAAGCAAGAAACAGAATCCCTAAATGATAAATACGCTTCGAGTATTACGCGGTAAAAACAACCAAAACGAATTGAAAATCGTAGCATAATTTTGGGCTATTAGCAAATGTTTGTTGTTTGTGTGAAAAAGT 58 5798589 0.946079535 18 53 393 0.925373134 1.315270435 0.164179104 0.137931034 0.253731343 58 3 2 62 3R:5798530-5798683 7 CG10979 FBtr0335518|FBtr0078631 5798393|5798393 5799994|5798749 AGTATTA 7mer-A1 dme-miR-8-3p 3R + 5798567 5798611 3'utr CG10979 FlyBase G30589.1 AATCCCTAAATGATAAATACGCTTCGAGTATTACGCGGTAAAAAC 22 5798588 0.774667251 3 21 146 0.941176471 1.505149978 0.088235294 0.318181818 0.558823529 22 2 0 32 3R:5798567-5798611 7 31.5 2265 FBgn0037379 1005.826667 25.93333333 39.53 0.031317523 1.214652956 0.796863142 4 5 4.5 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 3R 5799020 5799027 + 3R_5799020_5799027_+ 0.638550426 0.611642736 0.625096581 0.019026617 CG10979 FBtr0335518 5798393 5799994 3R + 5798973 5799046 3'utr CG10979 FlyBase G40528.1 TTGTTGAACTTTTGTTTGCTCGCATTTGTAGGTCTCTTCTAAAGCATACCAAAGAATTACTCTTTGTCGACCAA 17 5799019 0.983384985 7 15 126 0.842105263 0.726998728 0.105263158 0.117647059 0.210526316 17 1 2 16 3R:5798973-5799046 8 CG10979 FBtr0335518 5798393 5799994 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R + 5798995 5799034 3'utr CG10979 FlyBase G30592.1 CATTTGTAGGTCTCTTCTAAAGCATACCAAAGAATTACTC 7 5799019 0.964070263 2 7 49 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3R:5798995-5799034 8 9.5 2266 FBgn0037379 1005.826667 25.93333333 39.53 0.009444967 0.366323907 0.240323805 1 1 1 0.25 dme-bantam-3p 6mer3-8 TGATCT 3R 5799436 5799441 + 3R_5799436_5799441_+ 0.676990127 0.599946855 0.638468491 0.054477769 CG10979 FBtr0335518 5798393 5799994 3R + 5799418 5799462 3'utr CG10979 FlyBase G40530.1 AGACATTTGGCAGAGTCCTGATCTACACGAGTGGTTCAACGTATT 8 5799425 0.976524514 4 7 52 0.916666667 1.041392685 0 0.375 0.583333333 8 1 0 11 3R:5799418-5799462 6 CG10979 FBtr0335518 5798393 5799994 TGATCT 6mer3-8 dme-bantam-3p 3R + 5799410 5799466 3'utr CG10979 FlyBase G30593.1 TCCCTCGCAGACATTTGGCAGAGTCCTGATCTACACGAGTGGTTCAACGTATTTATA 8 5799437 0.96422517 5 8 47 1 1.230448921 0.117647059 0.625 0.823529412 8 0 0 17 3R:5799410-5799466 6 7.5 2267 FBgn0037379 1005.826667 25.93333333 39.53 0.007456553 0.289203085 0.18972932 11 -1 5 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3R 5826342 5826348 + 3R_5826342_5826348_+ 0.52086196 0.521192278 0.521027119 0.000233557 dgrn FBtr0078638|FBtr0078639|FBtr0344116 5826237|5826237|5826237 5826576|5826576|5826576 3R + 5826284 5826402 3'utr dgrn FlyBase G40537.1 AATATAGTTTAAAAAAAAACGCTTAACTATGTTAGAGACGGCAAATAATGTCTGTTCTTGTGATTCAGAAAAAATTAGTTATTTAAGTTGTCCTATGTAATCAGTGGCGCCCAAAAATA 83 5826341 0.99890242 16 73 711 0.871287129 1.467361417 0.297029703 0.168674699 0.316831683 83 11 2 88 3R:5826284-5826402 7 dgrn FBtr0078638|FBtr0078639|FBtr0344116 5826237|5826237|5826237 5826576|5826576|5826576 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 5826258 5826373 3'utr dgrn FlyBase G30596.1 ATTTTTTGCTCTGTGAGCCTTAATATAATATAGTTTAAAAAAAAACGCTTAACTATGTTAGAGACGGCAAATAATGTCTGTTCTTGTGATTCAGAAAAAATTAGTTATTTAAGTTG 48 5826341 0.802247247 13 43 434 0.925373134 1.315270435 0.208955224 0.270833333 0.47761194 48 3 2 62 3R:5826258-5826373 7 48.5 2268 FBgn0037384 485 36.97 56.92333333 0.1 1.311874493 0.852023189 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 5849859 5849866 - 3R_5849859_5849866_- 0.638292025 0.639235298 0.638763662 0.000667014 disp FBtr0078665|FBtr0078665|FBtr0078665 5849695|5849695|5849695 5850520|5850520|5850520 3R - 5849838 5849887 3'utr disp FlyBase G48474.1 ACGTTTGTAATAACCATGTAACTGTGATACAGAAGGTGAGAATCTTAATG 23 5849869 0.710328348 5 19 140 0.807692308 1.322219295 0.076923077 0.130434783 0.230769231 23 5 0 21 3R:5849838-5849887 8 disp FBtr0078665|FBtr0078665|FBtr0078665 5849695|5849695|5849695 5850520|5850520|5850520 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 5849806 5849897 3'utr disp FlyBase G36594.1 ACACACGCTCACGTTTGTAATAACCATGTAACTGTGATACAGAAGGTGAGAATCTTAATGAAATTGGTGTTTATACAGACATAGTGTTATAT 28 5849870 0.989007898 9 18 178 0.684210526 0.812913357 0.157894737 0.296296296 0.5 27 9 3 26 3R:5849806-5849897 8 22 2269 FBgn0029088 548.99 13.48 20.58 0.04007359 1.632047478 1.068999028 3 4 3.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 6000820 6000826 - 3R_6000820_6000826_- 0.748651627 0.748547661 0.748599644 7.35E-05 Rm62 FBtr0309321|FBtr0309321|FBtr0309321|FBtr0078653|FBtr0078653|FBtr0078653|FBtr0078650|FBtr0078650|FBtr0078650|FBtr0078651|FBtr0078651|FBtr0078651|FBtr0302597|FBtr0302597|FBtr0302597|FBtr0309322|FBtr0309322|FBtr0309322|FBtr0078654|FBtr0078654|FBtr0078654|FBtr0309320|FBtr0309320|FBtr0309320|FBtr0078649|FBtr0078649|FBtr0078649|FBtr0301947|FBtr0301947|FBtr0301947|FBtr0078652|FBtr0078652|FBtr0078652|FBtr0309319|FBtr0309319|FBtr0309319 6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000424|6000424|6000424|6000429|6000429|6000429|6000429|6000429|6000429|6000424|6000424|6000424|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429 6003027|6003027|6003027|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6002635|6002635|6002635|6001162|6001162|6001162|6002646|6002646|6002646|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6003646|6003646|6003646 3R - 6000799 6000924 3'utr Rm62 FlyBase G48504.2 AAGTTATTTGACGCTGGCCGCGAGGTCGGTACAACACAATCCAATTGAGAACATCAAAAACACTTTACTTAAACGCAAAAACCAATTTTCAAATATCATGTGATAATTTCTTAATTTAACGCAACG 195 6000829 0.807415952 23 177 1847 0.918103448 1.629409599 0.043103448 0.174358974 0.306034483 195 15 4 213 3R:6000799-6000924 7 Rm62 FBtr0078654|FBtr0078654|FBtr0078654|FBtr0309320|FBtr0309320|FBtr0309320|FBtr0301947|FBtr0301947|FBtr0301947|FBtr0078649|FBtr0078649|FBtr0078649|FBtr0309319|FBtr0309319|FBtr0309319|FBtr0078652|FBtr0078652|FBtr0078652|FBtr0309321|FBtr0309321|FBtr0309321|FBtr0078650|FBtr0078650|FBtr0078650|FBtr0078651|FBtr0078651|FBtr0078651|FBtr0302597|FBtr0302597|FBtr0302597|FBtr0078653|FBtr0078653|FBtr0078653|FBtr0309322|FBtr0309322|FBtr0309322 6000429|6000429|6000429|6000424|6000424|6000424|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000424|6000424|6000424|6000429|6000429|6000429|6000429|6000429|6000429 6001162|6001162|6001162|6002646|6002646|6002646|6001162|6001162|6001162|6001162|6001162|6001162|6003646|6003646|6003646|6001162|6001162|6001162|6003027|6003027|6003027|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6002635|6002635|6002635 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 6000802 6000878 3'utr Rm62 FlyBase G36612.1 GAGAACATCAAAAACACTTTACTTAAACGCAAAAACCAATTTTCAAATATCATGTGATAATTTCTTAATTTAACGCA 138 6000830 0.776641012 15 123 1287 0.893939394 1.946943271 0.065656566 0.369565217 0.560606061 138 20 1 177 3R:6000802-6000878 7 145.5 2270 FBgn0003261 4149.96 168.6633333 258.5433333 0.035060579 0.86266527 0.56276833 3 4 3.5 0.25 dme-miR-1002-5p 6mer3-8 CTACTT 3R 6001037 6001042 - 3R_6001037_6001042_- 0.53642038 0.552263793 0.544342087 0.011202976 Rm62 FBtr0309321|FBtr0078653|FBtr0078650|FBtr0078651|FBtr0302597|FBtr0309322|FBtr0078654|FBtr0309320|FBtr0078649|FBtr0301947|FBtr0078652|FBtr0309319 6000429|6000429|6000429|6000429|6000424|6000429|6000429|6000424|6000429|6000429|6000429|6000429 6003027|6001162|6001162|6001162|6001162|6002635|6001162|6002646|6001162|6001162|6001162|6003646 3R - 6000934 6001232 3'utr Rm62 FlyBase G48505.1 GAGCAACGGACGAGGCTTCGGAGGAGGCGGCGGCGGCGGCGGCGAAGGCAGACACTCGCGCTTCGACTAGATCGCGGACAATTAGATGAGCAGTAAAAGAAGCTATAGGAACAGGAGATTTCAGTAGCTAAACTAAACCGCACTAGGTCCTAAGTTAAATTAAGTTCATAGCTTAAGTTAAGATTTCGTACTACTTTCACCAAACCGCTGACGGTTATTTTTAGACTTAAATTCAGACTCCCTGATTAATGAAACACTACAAAATGCGAGCTATTTGAACATAGCGAATTTATGTTTAA 348 6001037 0.983484194 54 331 2553 0.95754717 2.307496038 0.169811321 0.189655172 0.33490566 348 17 1 406 3R:6000934-6001232 6 Rm62 FBtr0078654|FBtr0309320|FBtr0301947|FBtr0078649|FBtr0309319|FBtr0078652|FBtr0309321|FBtr0078650|FBtr0078651|FBtr0302597|FBtr0078653|FBtr0309322 6000429|6000424|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000424|6000429|6000429 6001162|6002646|6001162|6001162|6003646|6001162|6003027|6001162|6001162|6001162|6001162|6002635 CTACTT 6mer3-8 dme-miR-1002-5p 3R - 6000888 6001190 3'utr Rm62 FlyBase G36612.2 CGAAGGCAGACACTCGCGCTTCGACTAGATCGCGGACAATTAGATGAGCAGTAAAAGAAGCTATAGGAACAGGAGATTTCAGTAGCTAAACTAAACCGCACTAGGTCCTAAGTTAAATTAAGTTCATAGCTTAAGTTAAGATTTCGTACTACTTTCACCAAACCGCTGACGGTTATTTTTAGACTTAAATTCAGACTCCCTGATTAATGAAACACTACAAAATGCGAGCTATTTGAACATAGCGAATTTATGTTTAAATGATTTGTAAGTTATTTGACGCTGGCCGCGAGGTCGGTACAACAC 251 6001037 0.92983781 46 229 1764 0.910994764 1.696481204 0.193717277 0.362549801 0.581151832 251 28 6 348 3R:6000888-6001190 6 129 2271 FBgn0003261 4149.96 168.6633333 258.5433333 0.031084637 0.76483725 0.498949241 -5 -5 -5 0.25 dme-miR-33-5p 6mer3-8 CAATGC 3R 6001604 6001609 - 3R_6001604_6001609_- 0.999992767 0.963815204 0.981903985 0.025581426 Rm62 FBtr0309321|FBtr0309322|FBtr0309320|FBtr0309319 6000429|6000429|6000424|6000429 6003027|6002635|6002646|6003646 3R - 6001560 6001646 5'utr Rm62 FlyBase G48507.1 ACACAAAGGGCACCTCTTTCGCCTTCTTCACCAAGAACAATGCCAAGCAAGCCAAGGCGCTGGTCGACGTACTCCGAGAAGCTAATC 19 6001606 0.950158793 9 17 77 0.863636364 1.278753601 0.045454545 0.157894737 0.272727273 19 3 0 19 3R:6001560-6001646 6 Rm62 FBtr0309320|FBtr0309319|FBtr0309321|FBtr0309322 6000424|6000429|6000429|6000429 6002646|6003646|6003027|6002635 CAATGC 6mer3-8 dme-miR-33-5p 3R - 6001570 6001652 5'utr Rm62 FlyBase G36613.1 GATCCAACACAAAGGGCACCTCTTTCGCCTTCTTCACCAAGAACAATGCCAAGCAAGCCAAGGCGCTGGTCGACGTACTCCGA 11 6001620 0.934921823 5 10 38 0.866666667 1.113943352 0.133333333 0.363636364 0.533333333 11 2 0 13 3R:6001570-6001652 6 6.5 2272 FBgn0003261 4149.96 168.6633333 258.5433333 0.00156628 0.038538311 0.025140853 -3 11 4 0.25 dme-miR-1012-3p 7mer-m8 TTGACTA 3R 6001700 6001706 - 3R_6001700_6001706_- 0.454849799 0.337177715 0.396013757 0.08320674 Rm62 FBtr0309321|FBtr0309322|FBtr0309320|FBtr0309319 6000429|6000429|6000424|6000429 6003027|6002635|6002646|6003646 3R - 6001688 6001735 5'utr Rm62 FlyBase G48508.1 CGTGGACGGCATCAAGTATGTCATCAACTTTGACTACCCGCAAAACAG 16 6001706 0.971660604 3 16 96 1 1.230448921 0.176470588 0.0625 0.117647059 16 0 0 17 3R:6001688-6001735 7 Rm62 FBtr0309320|FBtr0309319|FBtr0309321|FBtr0309322 6000424|6000429|6000429|6000429 6002646|6003646|6003027|6002635 TTGACTA 7mer-m8 dme-miR-1012-3p 3R - 6001690 6001734 5'utr Rm62 FlyBase G36614.1 GTGGACGGCATCAAGTATGTCATCAACTTTGACTACCCGCAAAAC 17 6001706 0.974502547 4 16 98 0.913043478 0.84509804 0.130434783 0.294117647 0.47826087 17 0 2 21 3R:6001690-6001734 7 16 2273 FBgn0003261 4149.96 168.6633333 258.5433333 0.003855459 0.094863535 0.061885177 0 0 0 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 6360006 6360013 + 3R_6360006_6360013_+ 0.520621639 0.535682281 0.52815196 0.010649523 Pak FBtr0334543|FBtr0334544|FBtr0081716|FBtr0334539|FBtr0334542|FBtr0081714|FBtr0334540|FBtr0081715|FBtr0334541 6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464 6361614|6361614|6360248|6360248|6361614|6360248|6360248|6360248|6360050 3R + 6359958 6360028 3'utr Pak FlyBase G40564.1 CACACACACTATAGTTGTCAACATTAAAACATTAGAATTTGTAACTCTTGCATTTAAAGGAAATGAAAATA 121 6360005 0.767290277 6 120 962 0.993710692 2.198657087 0.528301887 0.223140496 0.408805031 121 1 0 158 3R:6359958-6360028 8 Pak FBtr0081715|FBtr0334541|FBtr0081714|FBtr0334540|FBtr0334539|FBtr0334542|FBtr0334543|FBtr0334544|FBtr0081716 6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464|6359464 6360248|6360050|6360248|6360248|6360248|6361614|6361614|6361614|6360248 TGCATTTA 8mer-A1 dme-miR-277-3p 3R + 6359989 6360028 3'utr Pak FlyBase G30616.1 TTAGAATTTGTAACTCTTGCATTTAAAGGAAATGAAAATA 84 6360005 0.751355944 5 84 635 1 2.100370545 0.595238095 0.345238095 0.563492063 84 0 0 126 3R:6359989-6360028 8 100 2274 FBgn0267698 1697.123333 60.89666667 93.02666667 0.058923237 1.642126006 1.074960585 1 1 1 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3R 6387608 6387614 + 3R_6387608_6387614_+ 0.519183306 0.520966954 0.52007513 0.001261266 godzilla FBtr0081721|FBtr0081720|FBtr0113198|FBtr0081722 6387311|6387311|6387311|6387311 6388304|6387789|6388304|6388304 3R + 6387555 6387641 3'utr godzilla FlyBase G40601.1 AATCCACACAGACACGATACACACACACGCGTCATTTATGTGCGTATAGAAATTGTGATTTATTTTATATACATTTTACAATTAACC 725 6387614 0.991288275 16 718 7646 0.992027335 2.4628969 0.002277904 0.172413793 0.316628702 725 5 2 871 3R:6387555-6387641 7 godzilla FBtr0081722|FBtr0113198|FBtr0081720|FBtr0081721 6387311|6387311|6387311|6387311 6388304|6388304|6387789|6388304 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 6387570 6387632 3'utr godzilla FlyBase G30642.1 GATACACACACACGCGTCATTTATGTGCGTATAGAAATTGTGATTTATTTTATATACATTTTA 452 6387614 0.991809986 15 435 4792 0.958778626 1.651831608 0 0.340707965 0.545038168 452 14 13 628 3R:6387570-6387632 7 585.5 2275 FBgn0037442 1202.333333 48.23 73.77 0.486969781 12.13974705 7.93683069 -6 -6 -6 0.25 dme-miR-965-3p 7mer-m8 TACGCTT 3R 7088652 7088658 + 3R_7088652_7088658_+ 0.614836081 0.594163231 0.604499656 0.014617948 alphaTub84B FBtr0081639 7088582 7088839 3R + 7088590 7088691 3'utr alphaTub84B FlyBase G40713.1 CGCCACTTCAACGCTCGATGGGAGCGTCATTGGTGGGCGGGGTAACCGTCGAAATCAGTGTTTACGCTTCCAATCGCAACAAAAAATTCACTGCAACACTGA 27 7088651 0.787850221 12 25 138 0.967741935 1.477121255 0.225806452 0.148148148 0.258064516 27 1 0 30 3R:7088590-7088691 7 alphaTub84B FBtr0081639 7088582 7088839 TACGCTT 7mer-m8 dme-miR-965-3p 3R + 7088620 7088664 3'utr alphaTub84B FlyBase G30737.1 TGGTGGGCGGGGTAACCGTCGAAATCAGTGTTTACGCTTCCAATC 8 7088651 0.741372395 4 8 47 1 1.041392685 0.090909091 0.375 0.545454545 8 0 0 11 3R:7088620-7088664 7 10 2276 FBgn0003884 10969.09667 757.73 1153.946667 0.000911652 0.013197313 0.008665912 1 1 1 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 7097964 7097971 - 3R_7097964_7097971_- 0.522909993 0.561500354 0.542205173 0.027287534 Alh FBtr0334672|FBtr0081613|FBtr0081612|FBtr0113200|FBtr0334677|FBtr0081614|FBtr0334673 7097681|7097681|7097681|7097681|7097681|7097681|7097681 7098310|7098310|7098310|7098310|7098310|7098310|7098310 3R - 7097949 7098053 3'utr Alh FlyBase G48633.2 AAATAATGTACATATATACATACACAGCTGTAAATCAAATTACAGATTGTTGCACAAAAGCAGTGATTGAGAAATTATCCATTGCATTTATCGACTACATTGACA 94 7097972 0.80524409 11 93 737 0.973913043 2.049218023 0.252173913 0.170212766 0.32173913 94 3 0 112 3R:7097949-7098053 8 Alh FBtr0334673|FBtr0334677|FBtr0081614|FBtr0081612|FBtr0113200|FBtr0334672|FBtr0081613 7097681|7097681|7097681|7097681|7097681|7097681|7097681 7098310|7098310|7098310|7098310|7098310|7098310|7098310 TGCATTTA 8mer-A1 dme-miR-277-3p 3R - 7097947 7098012 3'utr Alh FlyBase G36708.1 ACAGATTGTTGCACAAAAGCAGTGATTGAGAAATTATCCATTGCATTTATCGACTACATTGACAAC 68 7097972 0.772359325 9 64 524 0.962962963 1.716003344 0.25 0.411764706 0.62962963 68 3 1 104 3R:7097947-7098012 8 65 2277 FBgn0261238 489.5366667 11.73666667 17.96333333 0.132778614 5.538199375 3.618482093 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 7194832 7194838 + 3R_7194832_7194838_+ 0.448225257 0.594364791 0.521295024 0.103336231 lap FBtr0305153|FBtr0305153|FBtr0305153 7194510|7194510|7194510 7195358|7195358|7195358 3R + 7194794 7194843 3'utr lap FlyBase G40755.1 GGAAAAAAGTATTTAATGTGTGTTTCATGTGATAACTGTGTGATAACTAT 6 7194829 0.989990095 4 5 45 0.9 0.653212514 0.1 0.333333333 0.6 6 0 1 9 3R:7194794-7194843 7 lap FBtr0305153|FBtr0305153|FBtr0305153 7194510|7194510|7194510 7195358|7195358|7195358 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 7194810 7194843 3'utr lap FlyBase G30764.1 TGTGTGTTTCATGTGATAACTGTGTGATAACTAT 5 7194830 0.97987106 3 5 40 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 3R:7194810-7194843 7 5 2278 FBgn0086372 620.47 21.26666667 32.51 0.008058407 0.235109718 0.153798831 3 2 2.5 0.25 dme-miR-79-3p 7mer-A1 AGCTTTA 3R 7495031 7495037 - 3R_7495031_7495037_- 0.465002991 0.80281447 0.633908731 0.238868802 alpha-Est9 FBtr0302354|FBtr0302355 7494095|7493919 7495070|7495070 3R - 7495007 7495088 stop_codon alpha-Est9 FlyBase G48711.1 CGCGATGAGCTGTTGTAGGGATCTGCAGGAATCCATTTAGGCTAGACATGCAGCTTTAATAGTACAAGGGTGGGGGTCACAT 44 7495030 0.750769538 9 44 260 1 1.72427587 0.150943396 0.204545455 0.339622642 44 0 0 53 3R:7495007-7495088 7 alpha-Est9 FBtr0302355|FBtr0302354 7493919|7494095 7495070|7495070 AGCTTTA 7mer-A1 dme-miR-79-3p 3R - 7495000 7495110 stop_codon alpha-Est9 FlyBase G36764.1 GGTCTGGGAGAGTTTCTTTCGACGCGATGAGCTGTTGTAGGGATCTGCAGGAATCCATTTAGGCTAGACATGCAGCTTTAATAGTACAAGGGTGGGGGTCACATTTGGAGA 33 7495031 0.97739308 10 29 192 0.916666667 1.166331422 0.145833333 0.333333333 0.541666667 33 2 2 44 3R:7495000-7495110 7 28.5 2279 FBgn0015577 852.0066667 30.18666667 46.17 0.033450442 0.944125442 0.617283951 -7 -6 -6.5 0.25 dme-miR-92b-3p 7mer-m1 TGCAATT 3R 7519662 7519668 - 3R_7519662_7519668_- 0.765484607 0.765584289 0.765534448 7.05E-05 alpha-Est7 FBtr0081550 7519561 7519750 3R - 7519642 7519730 3'utr alpha-Est7 FlyBase G48721.1 CAGCCTAACAAAGAAGTCTCTAGAAACTGTAAATAGGTCAAAATGCTTTATAAAATATATTCTGCAATTGGATTGTTTTGCTTTATAAC 41 7519680 0.818083473 13 39 298 0.96 1.380211242 0.06 0.219512195 0.36 41 1 1 48 3R:7519642-7519730 7 alpha-Est7 FBtr0081550 7519561 7519750 TGCAATT 7mer-m1 dme-miR-92b-3p 3R - 7519614 7519734 3'utr alpha-Est7 FlyBase G36770.1 TGTACAGCCTAACAAAGAAGTCTCTAGAAACTGTAAATAGGTCAAAATGCTTTATAAAATATATTCTGCAATTGGATTGTTTTGCTTTATAACTAGTTTGCCCAATGATTGCATGTGGATG 28 7519682 0.982265086 12 27 210 1 1.612783857 0.097560976 0.25 0.487804878 28 0 0 41 3R:7519614-7519734 7 7.5 2280 FBgn0015575 416.1433333 24.78333333 37.7 0.018022636 0.30262273 0.198938992 12 14 13 0.25 dme-miR-34-5p 7mer-m8 CACTGCC 3R 7857595 7857601 - 3R_7857595_7857601_- 0.708781627 0.707023889 0.707902758 0.001242882 CG17816 FBtr0333829|FBtr0113202 7855585|7855580 7858911|7858173 3R - 7857585 7857611 3'utr CG17816 FlyBase G48753.1 AAGACACTTTCACTGCCTGAACCCAAT 6 7857594 0.904793495 3 6 25 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 3R:7857585-7857611 7 CG17816 FBtr0113202|FBtr0333829 7855580|7855585 7858173|7858911 CACTGCC 7mer-m8 dme-miR-34-5p 3R - 7857586 7857611 3'utr CG17816 FlyBase G36796.1 AAGACACTTTCACTGCCTGAACCCAA 5 7857594 0.941084292 2 4 19 0.818181818 0.954242509 0.181818182 0.8 0.909090909 5 2 0 9 3R:7857586-7857611 7 5.5 2281 FBgn0037525 90 2.533333333 3.903333333 0.061111111 2.171052632 1.409052092 -7 -7 -7 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 7916011 7916016 + 3R_7916011_7916016_+ 0.754184023 0.997705665 0.875944844 0.172195845 CG2678 FBtr0304703 7915277 7916550 3R + 7915987 7916040 3'utr CG2678 FlyBase G40816.1 ATCGCCAACATCATCTTAAAAAATGTACCTATTGTTCCGAGGAGTTCAAAACAG 20 7916010 0.855888185 5 20 173 1 1.361727836 0.130434783 0.15 0.260869565 20 0 0 23 3R:7915987-7916040 6 CG2678 FBtr0304703 7915277 7916550 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R + 7915992 7916039 3'utr CG2678 FlyBase G30806.1 CAACATCATCTTAAAAAATGTACCTATTGTTCCGAGGAGTTCAAAACA 9 7916010 0.803827853 4 9 66 1 1.176091259 0.133333333 0.222222222 0.533333333 9 0 0 15 3R:7915992-7916039 6 14.5 2282 FBgn0014931 371 24.70666667 37.91 0.039083558 0.586886131 0.382484832 1 1 1 0.25 dme-miR-283-5p 6mer3-8 TGATAT 3R 7916757 7916762 - 3R_7916757_7916762_- 0.781178413 0.875989946 0.82858418 0.067041855 CG10445 FBtr0304704 7916597 7916927 3R - 7916700 7916813 3'utr CG10445 FlyBase G48777.1 CAATTGTGTATTAATACTACACAGACTACCTTTAACGTTATACGTTACATTTGATATAGTCGCACGTCCATAAAGCATAAAGCATATATATTCCCTTTTTTTCTATATTAAGAA 67 7916757 0.969975107 12 65 373 0.974025974 1.574031268 0.402597403 0.119402985 0.233766234 67 1 1 75 3R:7916700-7916813 6 CG10445 FBtr0304704 7916597 7916927 TGATAT 6mer3-8 dme-miR-283-5p 3R - 7916723 7916798 3'utr CG10445 FlyBase G36818.1 ACTACACAGACTACCTTTAACGTTATACGTTACATTTGATATAGTCGCACGTCCATAAAGCATAAAGCATATATAT 41 7916757 0.815368837 7 38 216 0.949152542 1.447158031 0.288135593 0.243902439 0.474576271 41 2 1 56 3R:7916723-7916798 6 45.5 2283 FBgn0037531 329.1333333 12.96 20.04666667 0.138241847 3.510802469 2.269704024 -5 -5 -5 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 3R 7916841 7916847 - 3R_7916841_7916847_- 0.605788603 0.671710188 0.638749396 0.04661361 CG10445 FBtr0304704 7916597 7916927 3R - 7916823 7916853 3'utr CG10445 FlyBase G48778.1 AATTTCACCAAAGTGTTTTTTAACGGATTGA 13 7916835 0.626213475 4 13 121 1 1.176091259 0 0.076923077 0.2 13 0 0 15 3R:7916823-7916853 7 CG10445 FBtr0304704 7916597 7916927 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 7916815 7916857 3'utr CG10445 FlyBase G36819.1 TTACAATTTCACCAAAGTGTTTTTTAACGGATTGAATTCGTTT 9 7916838 0.862477825 5 7 76 1 1.079181246 0 0.333333333 0.5 9 0 0 12 3R:7916815-7916857 7 9.5 2284 FBgn0037531 329.1333333 12.96 20.04666667 0.028863682 0.733024691 0.473894247 -12 -9 -10.5 0.25 dme-miR-1008-3p 7mer-m8 AGCTGTG 3R 8005344 8005350 + 3R_8005344_8005350_+ 0.671760032 0.671744901 0.671752466 1.07E-05 CG2698 FBtr0335228|FBtr0308075|FBtr0335225|FBtr0335226|FBtr0081784 8005015|8003875|8005283|8005283|8005283 8005719|8005719|8005719|8005719|8005719 3R + 8005300 8005428 3'utr CG2698 FlyBase G40847.1 AAACTACGAATTTCCTTTTAATACTCGAACTGCGAACTAACATAAGCTGTGTGGCCAAATACCTGACAATCAAAATGAGATTGGCCCGAATATCATAACCTAGACATAGGCTGGAGCTTCCTTTAACTA 55 8005351 0.956982528 12 52 248 0.9375 1.176091259 0.03125 0.163636364 0.28125 55 1 3 60 3R:8005300-8005428 7 CG2698 FBtr0081784|FBtr0335225|FBtr0335226|FBtr0335228|FBtr0308075 8005283|8005283|8005283|8005015|8003875 8005719|8005719|8005719|8005719|8005719 AGCTGTG 7mer-m8 dme-miR-1008-3p 3R + 8005315 8005390 3'utr CG2698 FlyBase G30831.1 TTTTAATACTCGAACTGCGAACTAACATAAGCTGTGTGGCCAAATACCTGACAATCAAAATGAGATTGGCCCGAAT 39 8005351 0.956495156 10 36 170 0.93877551 1.361727836 0 0.230769231 0.387755102 39 2 1 46 3R:8005315-8005390 7 31.5 2285 FBgn0037536 142.6833333 5.336666667 8.11 0.220768602 5.902560899 3.884093711 -7 -7 -7 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 8036608 8036615 + 3R_8036608_8036615_+ 0.417714889 0.423575829 0.420645359 0.004144282 unc-45 FBtr0081788 8036503 8036652 3R + 8036596 8036633 3'utr unc-45 FlyBase G40867.1 AAAATATCAAATGTACTTAACTGTTTTATAAATATTGT 57 8036607 0.861064477 3 57 512 1 1.857332496 0.097222222 0.192982456 0.361111111 57 0 0 72 3R:8036596-8036633 8 unc-45 FBtr0081788 8036503 8036652 GTACTTAA 8mer-A1 dme-miR-252-5p 3R + 8036596 8036632 3'utr unc-45 FlyBase G30845.1 AAAATATCAAATGTACTTAACTGTTTTATAAATATTG 30 8036607 0.850857656 3 30 266 1 1.612783857 0.195121951 0.266666667 0.463414634 30 0 0 41 3R:8036596-8036632 8 43.5 2286 FBgn0010812 498 18.51666667 28.27333333 0.087349398 2.349234923 1.538552228 1 1 1 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 3R 8121526 8121531 + 3R_8121526_8121531_+ 0.999779746 0.883245242 0.941512494 0.082402335 puc FBtr0081792|FBtr0339722 8121334|8121334 8122294|8122294 3R + 8121515 8121562 3'utr puc FlyBase G40882.2 AAGGAATTTTTTACCTGGCTGAAAAAATTTAGATTTTATTAAGTCAGA 26 8121526 0.683281508 9 23 210 0.90625 1.161368002 0.15625 0.115384615 0.28125 26 2 1 29 3R:8121515-8121562 6 puc FBtr0081792|FBtr0339722 8121334|8121334 8122294|8122294 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 3R + 8121506 8121594 3'utr puc FlyBase G30855.1 ACTGAAACTAAGGAATTTTTTACCTGGCTGAAAAAATTTAGATTTTATTAAGTCAGAAACGGCGAGAGGGCTGATACTTCCTATTAAAC 15 8121530 0.983019731 7 14 107 0.95 1.278753601 0.1 0.333333333 0.5 15 1 0 19 3R:8121506-8121594 6 16.5 2287 FBgn0243512 1835.12 76.61666667 117.5466667 0.008991238 0.215357842 0.140369782 0 -4 -2 0.25 dme-miR-980-3p 6mer2-7 GCAGCT 3R 8121709 8121714 + 3R_8121709_8121714_+ 0.649340179 0.910336831 0.779838505 0.184552466 puc FBtr0081792|FBtr0339722 8121334|8121334 8122294|8122294 3R + 8121640 8121751 3'utr puc FlyBase G40883.1 ATAAAAACGTTCAATATCTGTACATACAAACGTACCTAAAACAAAACACAAGGGAAAGAAATACCAATTGCAGCTTAAACTATGTACTTGCAATACCTTTTAAGAGCTTTTG 101 8121707 0.801135091 13 99 543 0.982905983 2.06069784 0.076923077 0.148514851 0.264957265 101 2 0 115 3R:8121640-8121751 6 puc FBtr0081792|FBtr0339722 8121334|8121334 8122294|8122294 GCAGCT 6mer2-7 dme-miR-980-3p 3R + 8121688 8121746 3'utr puc FlyBase G30857.1 CAAGGGAAAGAAATACCAATTGCAGCTTAAACTATGTACTTGCAATACCTTTTAAGAGC 56 8121707 0.802543346 7 53 288 1 1.908485019 0.024691358 0.303571429 0.518518519 56 0 0 81 3R:8121688-8121746 6 63 2288 FBgn0243512 1835.12 76.61666667 117.5466667 0.03433018 0.822275397 0.53595735 2 2 2 0.25 dme-miR-31a-5p 7mer-A1 CTTGCCA 3R 8125187 8125193 + 3R_8125187_8125193_+ 0.753811888 0.794172406 0.773992147 0.028539183 CG7878 FBtr0113205 8125137 8125273 3R + 8125168 8125217 3'utr CG7878 FlyBase G40902.1 CTAGAGCGCATTGAAGTGCCTTGCCAAAAATTGTTTAACTATTTATCTAT 27 8125189 0.869886937 2 26 202 0.96875 1.491361694 0.0625 0.148148148 0.28125 27 1 0 31 3R:8125168-8125217 7 CG7878 FBtr0113205 8125137 8125273 CTTGCCA 7mer-A1 dme-miR-31a-5p 3R + 8125153 8125215 3'utr CG7878 FlyBase G30869.1 TCTAGTTATAAGAGACTAGAGCGCATTGAAGTGCCTTGCCAAAAATTGTTTAACTATTTATCT 23 8125189 0.981144917 5 21 155 0.972222222 1.544068044 0.111111111 0.391304348 0.611111111 23 1 0 35 3R:8125153-8125215 7 24 2289 FBgn0037549 1708.053333 87.89666667 135.3866667 0.014051083 0.273047897 0.177270041 -2 -2 -2 0.25 dme-miR-277-3p 7mer-m8 TGCATTT 3R 8237390 8237396 - 3R_8237390_8237396_- 0.613778007 0.607407996 0.610593001 0.00450427 Ada2b FBtr0334315|FBtr0081807|FBtr0100368 8236630|8237112|8237112 8237918|8237918|8237437 3R - 8237369 8237410 3'utr Ada2b FlyBase G48853.1 GATTAAGAGCCACATGCATTTCCAAGGACTTCACTTTATTTT 13 8237394 0.985746298 6 9 76 0.714285714 1 0.071428571 0.076923077 0.142857143 13 4 0 10 3R:8237369-8237410 7 Ada2b FBtr0100368|FBtr0081807|FBtr0334315 8237112|8237112|8236630 8237437|8237918|8237918 TGCATTT 7mer-m8 dme-miR-277-3p 3R - 8237375 8237408 3'utr Ada2b FlyBase G36877.1 TTAAGAGCCACATGCATTTCCAAGGACTTCACTT 7 8237395 0.882334126 3 6 40 0.909090909 1 0.090909091 0.428571429 0.636363636 7 1 0 10 3R:8237375-8237408 7 9 2290 FBgn0037555 444.2066667 24.31 37.33666667 0.02026084 0.370218017 0.241049906 -2 -1 -1.5 0.25 dme-miR-14-3p 7mer-m8 AAGACTG 3R 8237527 8237533 - 3R_8237527_8237533_- 0.671795657 0.671787735 0.671791696 5.66E-06 Ada2b FBtr0334315|FBtr0081807 8236630|8237112 8237918|8237918 3R - 8237471 8237558 3'utr Ada2b FlyBase G48854.1 TACGCCCACCACCTACCTCTCGGTTAAGACTGTCTGCTTGAGCGGAGCACCATCGTTGGGTAGTCCTATGGAGACTTCGCTGCGCAAG 34 8237534 0.946006529 12 30 235 0.880952381 1.568201724 0.119047619 0.205882353 0.357142857 34 5 0 37 3R:8237471-8237558 7 Ada2b FBtr0081807|FBtr0334315 8237112|8236630 8237918|8237918 AAGACTG 7mer-m8 dme-miR-14-3p 3R - 8237473 8237596 3'utr Ada2b FlyBase G36878.1 AGTCACAACGAGCTGGATCTGTGCAAGAAGCATAATATTACGCCCACCACCTACCTCTCGGTTAAGACTGTCTGCTTGAGCGGAGCACCATCGTTGGGTAGTCCTATGGAGACTTCGCTGCGCA 24 8237534 0.983305192 15 18 137 0.75 1.079181246 0.28125 0.25 0.4375 24 7 1 24 3R:8237473-8237596 7 21 2291 FBgn0037555 444.2066667 24.31 37.33666667 0.047275292 0.86384204 0.562449781 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 8240818 8240824 - 3R_8240818_8240824_- 0.787887895 0.793523959 0.790705927 0.003985325 CG9636 FBtr0081806|FBtr0081806|FBtr0081806 8240745|8240745|8240745 8242389|8242389|8242389 3R - 8240810 8240850 3'utr CG9636 FlyBase G48864.1 ATTTTATATATATTAATATTATTTTTTGTGATAATTTAAAA 19 8240826 0.616078792 6 17 260 0.913043478 0.84509804 0 0.210526316 0.347826087 19 0 2 21 3R:8240810-8240850 7 CG9636 FBtr0081806|FBtr0081806|FBtr0081806 8240745|8240745|8240745 8242389|8242389|8242389 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 8240804 8240850 3'utr CG9636 FlyBase G36884.1 ATTTTATATATATTAATATTATTTTTTGTGATAATTTAAAAAAGGCA 18 8240827 0.6500114 8 15 242 0.769230769 1 0 0.333333333 0.538461538 18 5 1 20 3R:8240804-8240850 7 18 2292 FBgn0037556 751.8933333 33.43666667 51.34666667 0.023939566 0.538331173 0.350558297 2 3 2.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 8241671 8241676 - 3R_8241671_8241676_- 0.978544867 0.938716989 0.958630928 0.028162578 CG9636 FBtr0081806|FBtr0081806|FBtr0081806|FBtr0306301|FBtr0306301|FBtr0306301 8240745|8240745|8240745|8240907|8240907|8240907 8242389|8242389|8242389|8242389|8242389|8242389 3R - 8241497 8241752 3'utr CG9636 FlyBase G48870.1 TATGACGACTGGGGTCGCGCCTGCGCTGTGACTTTTCCTTAGTTCCTTACGCAAGCGAATTCAAATCGAACCGTATCTGTGAAAATCGTGAATCTCAAACTCTTGAATGTCCTCGAACAGTATTGTTAAACATACTTCAGTCCCTAGGATCAGACGCAGGTGCGACACCAAAACCGAATTTGGCGCTCAAATAGACTTATTTAGACGTTTTTAGGTACTCGAATTGATAAATTTTGTTGGCCGTGTGCGTGTTTTT 281 8241677 0.826200735 33 269 1838 0.961538462 2.511883361 0.25739645 0.163701068 0.304733728 281 13 0 325 3R:8241497-8241752 6 CG9636 FBtr0081806|FBtr0081806|FBtr0081806|FBtr0306301|FBtr0306301|FBtr0306301 8240745|8240745|8240745|8240907|8240907|8240907 8242389|8242389|8242389|8242389|8242389|8242389 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 8241535 8241777 3'utr CG9636 FlyBase G36887.1 TCTGTTTCCGTTGCCAGTCGTCAATTATGACGACTGGGGTCGCGCCTGCGCTGTGACTTTTCCTTAGTTCCTTACGCAAGCGAATTCAAATCGAACCGTATCTGTGAAAATCGTGAATCTCAAACTCTTGAATGTCCTCGAACAGTATTGTTAAACATACTTCAGTCCCTAGGATCAGACGCAGGTGCGACACCAAAACCGAATTTGGCGCTCAAATAGACTTATTTAGACGTTTTTAGGTAC 190 8241677 0.823370133 28 181 1149 0.944029851 1.925999266 0.291044776 0.315789474 0.514925373 190 13 2 253 3R:8241535-8241777 6 111 2293 FBgn0037556 751.8933333 33.43666667 51.34666667 0.147627323 3.319708902 2.161776162 1 1 1 0.25 dme-miR-307a-3p 6mer3-8 GGTTGT 3R 8262256 8262261 - 3R_8262256_8262261_- 0.635384436 0.640971338 0.638177887 0.003950535 RpA-70 FBtr0081867 8262118 8262361 3R - 8262237 8262286 3'utr RpA-70 FlyBase G48886.1 ACGTTATTTCCAAATATTGTGAATGGGTTGTTATTCAGCTACGCTTCCCT 157 8262270 0.734602452 7 152 1447 0.965714286 1.449735454 0.057142857 0.108280255 0.2 157 1 5 169 3R:8262237-8262286 6 RpA-70 FBtr0081867 8262118 8262361 GGTTGT 6mer3-8 dme-miR-307a-3p 3R - 8262232 8262292 3'utr RpA-70 FlyBase G36896.1 TTACATACGTTATTTCCAAATATTGTGAATGGGTTGTTATTCAGCTACGCTTCCCTTAATT 86 8262270 0.704613687 9 80 780 0.935483871 1.161368002 0.096774194 0.325581395 0.532258065 86 1 7 116 3R:8262232-8262292 6 119 2294 FBgn0010173 2297.653333 131.1433333 201.0833333 0.051791973 0.907404113 0.591794447 9 9 9 0.25 dme-miR-14-3p 6mer2-7 AGACTG 3R 8302765 8302770 - 3R_8302765_8302770_- 0.988655109 0.992610691 0.9906329 0.002797032 nac FBtr0081863 8302684 8302798 3R - 8302745 8302788 3'utr nac FlyBase G48900.1 AAGCTGCCAAAGTAAAGTAGACTGTTTAGGACTCTAGGAGATGT 19 8302763 0.894385741 4 17 124 0.916666667 1.342422681 0.083333333 0.210526316 0.375 19 2 0 22 3R:8302745-8302788 6 nac FBtr0081863 8302684 8302798 AGACTG 6mer2-7 dme-miR-14-3p 3R - 8302741 8302788 3'utr nac FlyBase G36911.1 AAGCTGCCAAAGTAAAGTAGACTGTTTAGGACTCTAGGAGATGTAAGT 20 8302771 0.958973438 7 20 124 1 1.447158031 0.107142857 0.3 0.5 20 0 0 28 3R:8302741-8302788 6 19 2295 FBgn0265351 61.36333333 6.03 9.073333333 0.309631159 3.150912106 2.094048494 -7 1 -3 0.25 dme-miR-304-5p 7mer-A1 GAGATTA 3R 8304539 8304545 - 3R_8304539_8304545_- 0.821153192 0.751036838 0.786095015 0.049579782 Sgt1 FBtr0081862 8304188 8304585 3R - 8304514 8304582 3'utr Sgt1 FlyBase G48904.1 AAATGGCCATACTCCTTTATTTATAGAGTCAGCGAGAGAGATTAACAGAGAATAATTACTATAACGTGT 100 8304540 0.791933202 13 86 505 0.876106195 1.217483944 0.185840708 0.12 0.221238938 100 9 5 99 3R:8304514-8304582 7 Sgt1 FBtr0081862 8304188 8304585 GAGATTA 7mer-A1 dme-miR-304-5p 3R - 8304515 8304562 3'utr Sgt1 FlyBase G36912.1 TTATAGAGTCAGCGAGAGAGATTAACAGAGAATAATTACTATAACGTG 66 8304541 0.557150092 6 54 298 0.816326531 1.057991947 0.081632653 0.393939394 0.591836735 66 12 6 80 3R:8304515-8304562 7 79 2296 FBgn0265101 762 87.04666667 133.2433333 0.103674541 0.907559164 0.592900208 -5 -4 -4.5 0.25 dme-miR-2535b-3p 6mer3-8 CCGTGA 3R 8340466 8340471 - 3R_8340466_8340471_- 0.998594346 0.997016286 0.997805316 0.001115815 CG9603 FBtr0081855|FBtr0305680 8339942|8339942 8340519|8340519 3R - 8340429 8340625 stop_codon CG9603 FlyBase G48919.1 CGTCGTGGACAACGTGCTCTACCGCGTCACCGTCGCTCTCGCCCTCGTCGGCATCGGTGGCATGGGCAAGCTTTTCTACGAGCTGAGTGTTCCCAAGAAGGAGTGAAGTCGCAGTACCGAACCCTAAGCTAAGCCATTAAACCCCGCGCAAGATCCGTGATTCAGCGTAGTCGCCTTATATTTCAATGTTTTGATTG 119 8340464 0.966881188 17 102 551 0.856115108 1.297395711 0.323741007 0.159663866 0.28057554 119 15 5 119 3R:8340429-8340625 6 CG9603 FBtr0081855|FBtr0305680 8339942|8339942 8340519|8340519 CCGTGA 6mer3-8 dme-miR-2535b-3p 3R - 8340442 8340487 5'utr CG9603 FlyBase G36925.1 AAACCCCGCGCAAGATCCGTGATTCAGCGTAGTCGCCTTATATTTC 64 8340464 0.949002874 6 58 285 0.921052632 1.419129308 0.570175439 0.53125 0.736842105 64 6 3 105 3R:8340442-8340487 6 83 2297 FBgn0040529 1087.99 255.58 391.3733333 0.076287466 0.324751546 0.212073723 -7 -7 -7 0.25 dme-miR-283-5p 8mer-A1 TGATATTA 3R 8352141 8352148 + 3R_8352141_8352148_+ 0.59217234 0.591797498 0.591984919 0.000265024 Atg13 FBtr0081843 8351704 8352817 3R + 8352094 8352153 3'utr Atg13 FlyBase G41016.1 ATATTTATATATGCCATTGTGTTAAGTAGAGTTGATAGGCTGCTATTTGATATTACCCAC 176 8352129 0.675267041 16 167 1457 0.946341463 1.50965048 0.209756098 0.142045455 0.263414634 176 6 5 194 3R:8352094-8352153 8 Atg13 FBtr0081843 8351704 8352817 TGATATTA 8mer-A1 dme-miR-283-5p 3R + 8352085 8352158 3'utr Atg13 FlyBase G30956.1 CCCGCCCTCATATTTATATATGCCATTGTGTTAAGTAGAGTTGATAGGCTGCTATTTGATATTACCCACTATGT 115 8352137 0.888949192 14 110 954 0.956284153 2.243038049 0.224043716 0.382608696 0.612021858 115 8 0 175 3R:8352085-8352158 8 80.5 2298 FBgn0261108 690.5733333 27.67666667 42.22333333 0.116569807 2.908587258 1.906528776 12 4 8 0.25 dme-miR-184-3p 6mer3-8 TCCGTC 3R 8359853 8359858 + 3R_8359853_8359858_+ 0.954123368 0.893396521 0.923759944 0.042940403 stck FBtr0081846|FBtr0081845|FBtr0081844|FBtr0306260 8359725|8359725|8359725|8359725 8359960|8359964|8359964|8359964 3R + 8359804 8359886 3'utr stck FlyBase G41033.1 ATTTGAGAAACTAAAACCAAACAAACTAAAACCTCTTGTGCATGTCCTTTCCGTCTGTTGTAATCCGGTTGTGTGTAACTTAA 57 8359852 0.991784635 9 50 548 0.914634146 1.273001272 0.402439024 0.245614035 0.475609756 57 4 3 75 3R:8359804-8359886 6 stck FBtr0081846|FBtr0081845|FBtr0081844|FBtr0306260 8359725|8359725|8359725|8359725 8359960|8359964|8359964|8359964 TCCGTC 6mer3-8 dme-miR-184-3p 3R + 8359704 8359865 stop_codon stck FlyBase G30969.1 TGACAATGAAAAAGAACACCTAATGCCTTGGAGCGAGTCTCAGATCCACACCAAACAGTGCCTTTGTCGTTGTAGACCCGCTTTCACTACCATTTTTAACATTTGAGAAACTAAAACCAAACAAACTAAAACCTCTTGTGCATGTCCTTTCCGTCTGTTGTA 63 8359852 0.98422314 12 63 496 1 1.924279286 0.452380952 0.26984127 0.452380952 63 0 0 84 3R:8359704-8359865 6 43 2299 FBgn0020249 375.3333333 31.76 48.60666667 0.114564831 1.353904282 0.884652311 1 1 1 0.25 dme-miR-1003-3p 6mer3-8 ATGTGA 3R 8647820 8647825 - 3R_8647820_8647825_- 0.999772889 0.978447676 0.989110282 0.015079194 Mkk4 FBtr0334320|FBtr0081892|FBtr0300443 8646170|8647582|8647755 8648721|8648721|8648721 3R - 8647809 8647840 3'utr Mkk4 FlyBase G48953.1 ACAAAAACAAAAGTCATGTGAAAACTACAAAT 7 8647825 0.894502451 3 6 19 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3R:8647809-8647840 6 Mkk4 FBtr0334320|FBtr0081892|FBtr0300443 8646170|8647582|8647755 8648721|8648721|8648721 ATGTGA 6mer3-8 dme-miR-1003-3p 3R - 8647803 8647844 3'utr Mkk4 FlyBase G36950.1 AGCTACAAAAACAAAAGTCATGTGAAAACTACAAATAAAACA 7 8647815 0.928447892 4 7 23 1 1.041392685 0 0.571428571 0.727272727 7 0 0 11 3R:8647803-8647844 6 6.5 2300 FBgn0024326 1503.63 65.79666667 100.66 0.004322872 0.098789199 0.064573813 0 -10 -5 0.25 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 8655106 8655111 - 3R_8655106_8655111_- 0.745520453 0.999435464 0.872477959 0.179545018 bel FBtr0334319 8654973 8655784 3R - 8655098 8655138 3'utr bel FlyBase G48974.1 TGAAAGCGCAAATCCTTGAACTTCAATTGATGATTTTAAAC 10 8655111 0.961488311 4 10 84 1 1.113943352 0.076923077 0.3 0.461538462 10 0 0 13 3R:8655098-8655138 6 bel FBtr0334319 8654973 8655784 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R - 8655079 8655127 3'utr bel FlyBase G36964.1 ATCCTTGAACTTCAATTGATGATTTTAAACGAAGAAAACATAAAAATAG 6 8655112 0.983124136 5 6 47 1 0.954242509 0.111111111 0.333333333 0.555555556 6 0 0 9 3R:8655079-8655127 6 7 2301 FBgn0263231 3598.653333 111.0166667 171.27 0.001945172 0.063053596 0.040871139 0 1 0.5 0.25 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 8715319 8715326 - 3R_8715319_8715326_- 0.615338278 0.62321359 0.619275934 0.005568678 Cks85A FBtr0081949|FBtr0305339|FBtr0337074 8715198|8715198|8712904 8715436|8715436|8715436 3R - 8715269 8715335 3'utr Cks85A FlyBase G49018.1 AAGAAACCATAGCTTTAGGGTTCAGCTGGGAAGTTCAAAGACACGAAACGAACTGAAGACATCGTTT 25 8715326 0.968230572 8 24 130 0.925925926 1.397940009 0.148148148 0.08 0.148148148 25 2 0 25 3R:8715269-8715335 8 Cks85A FBtr0305339|FBtr0337074|FBtr0081949 8715198|8712904|8715198 8715436|8715436|8715436 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R - 8715284 8715336 3'utr Cks85A FlyBase G36998.1 TAAGAAACCATAGCTTTAGGGTTCAGCTGGGAAGTTCAAAGACACGAAACGAA 15 8715326 0.961883877 4 14 71 0.925925926 1.397940009 0 0.466666667 0.703703704 15 2 0 25 3R:8715284-8715336 8 16.5 2302 FBgn0037613 139.0166667 24.61 37.97 0.118690804 0.670459163 0.434553595 0 0 0 0.25 dme-miR-33-5p 6mer3-8 CAATGC 3R 8715382 8715387 - 3R_8715382_8715387_- 0.69454595 0.375358159 0.534952055 0.225699787 Cks85A FBtr0081949|FBtr0305339|FBtr0337074 8715198|8715198|8712904 8715436|8715436|8715436 3R - 8715341 8715462 stop_codon Cks85A FlyBase G49019.1 AGGCCATCGCGAATCTCTGCGGTTAGGCGGAGGATGCCATGCCGCCGAGGAATGCTCTTCCAAGGACGCACTCGTCAATGCTCACGTAGTATTTCATAAGTTAGCATCAGGCAGCCTGATGT 26 8715384 0.965005246 14 24 127 0.942857143 1.217483944 0.285714286 0.230769231 0.428571429 26 1 1 33 3R:8715341-8715462 6 Cks85A FBtr0305339|FBtr0337074|FBtr0081949 8715198|8712904|8715198 8715436|8715436|8715436 CAATGC 6mer3-8 dme-miR-33-5p 3R - 8715341 8715428 3'utr Cks85A FlyBase G36999.1 TGCCATGCCGCCGAGGAATGCTCTTCCAAGGACGCACTCGTCAATGCTCACGTAGTATTTCATAAGTTAGCATCAGGCAGCCTGATGT 20 8715409 0.9735531 10 19 110 0.942857143 1.51851394 0.371428571 0.5 0.714285714 20 2 0 33 3R:8715341-8715428 6 10 2303 FBgn0037613 139.0166667 24.61 37.97 0.071933821 0.406338887 0.263365815 -3 22 9.5 0.25 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 8720123 8720129 + 3R_8720123_8720129_+ 0.638284569 0.658821293 0.648552931 0.01452164 CG8116 FBtr0300544|FBtr0081905|FBtr0300543 8718041|8718041|8718041 8720339|8720339|8721320 3R + 8720103 8720168 5'utr CG8116 FlyBase G41114.1 AATGAATTTGAAAAGCAGTAGGCAGCTGAATTGCTCATGGCCGTGGAGAAGAGAAACCAAACAGAA 30 8720140 0.945167452 5 29 122 0.972972973 1.556302501 0.324324324 0.166666667 0.324324324 30 1 0 36 3R:8720103-8720168 7 CG8116 FBtr0081905|FBtr0300543|FBtr0300544 8718041|8718041|8718041 8720339|8721320|8720339 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 8720073 8720162 5'utr CG8116 FlyBase G31020.1 AAAAGGATAATATGCGGTGTAAGGAAATTTAATGAATTTGAAAAGCAGTAGGCAGCTGAATTGCTCATGGCCGTGGAGAAGAGAAACCAA 26 8720121 0.947154766 6 26 111 1 1.62324929 0.19047619 0.5 0.69047619 26 0 0 42 3R:8720073-8720162 7 17.5 2304 FBgn0037614 544.57 26.27333333 40.6 0.032135446 0.6660746 0.431034483 -17 2 -7.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 8720513 8720520 + 3R_8720513_8720520_+ 0.620759077 0.63107113 0.625915103 0.007291685 CG8116 FBtr0300543 8718041 8721320 3R + 8720460 8720532 3'utr CG8116 FlyBase G41115.1 TAGCTCGAATCTTAAAAAGAATTGTAAAAAAATCAGTGGAATGTCTCACAAAATCTAGTCAGCATCAAAATCA 37 8720513 0.980800892 8 31 224 0.857142857 1.255272505 0 0.108108108 0.214285714 37 5 1 36 3R:8720460-8720532 8 CG8116 FBtr0300543 8718041 8721320 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 8720489 8720531 3'utr CG8116 FlyBase G31022.1 AAATCAGTGGAATGTCTCACAAAATCTAGTCAGCATCAAAATC 22 8720513 0.705455413 5 18 122 0.806451613 0.795880017 0 0.363636364 0.548387097 22 3 3 25 3R:8720489-8720531 8 27.5 2305 FBgn0037614 544.57 26.27333333 40.6 0.050498558 1.046688658 0.677339901 0 0 0 0.25 dme-miR-33-5p 6mer3-8 CAATGC 3R 8720941 8720946 + 3R_8720941_8720946_+ 0.528985036 0.480551475 0.504768255 0.034247656 CG8116 FBtr0300543 8718041 8721320 3R + 8720890 8720965 3'utr CG8116 FlyBase G41117.1 AATCACGCTCAATTATCCCCGCCTGATAGGATCCGAGGATTGCAGCTCCTCCAATGCTAGTCACTAATGTTCACAA 56 8720944 0.78675122 12 53 321 0.955882353 1.812913357 0.088235294 0.178571429 0.323529412 56 3 0 65 3R:8720890-8720965 6 CG8116 FBtr0300543 8718041 8721320 CAATGC 6mer3-8 dme-miR-33-5p 3R + 8720896 8720963 3'utr CG8116 FlyBase G31023.1 GCTCAATTATCCCCGCCTGATAGGATCCGAGGATTGCAGCTCCTCCAATGCTAGTCACTAATGTTCAC 41 8720944 0.770427732 10 37 240 0.865671642 1.462397998 0.119402985 0.414634146 0.641791045 41 8 1 58 3R:8720896-8720963 6 39 2306 FBgn0037614 544.57 26.27333333 40.6 0.071616138 1.484394824 0.960591133 -3 -3 -3 0.25 dme-miR-305-3p 6mer3-8 ATGTGC 3R 8735670 8735675 + 3R_8735670_8735675_+ 0.59450678 0.594060895 0.594283837 0.000315299 CG8202 FBtr0081914 8735615 8735837 3R + 8735628 8735687 3'utr CG8202 FlyBase G41138.1 GTAAATCCTATGGTTATTTATTTGCTGAGATTATATATTCTTATGTGCATGAATCTTTTA 24 8735664 0.991982066 6 23 274 0.965517241 1.447158031 0.275862069 0.166666667 0.310344828 24 1 0 28 3R:8735628-8735687 6 CG8202 FBtr0081914 8735615 8735837 ATGTGC 6mer3-8 dme-miR-305-3p 3R + 8735628 8735686 3'utr CG8202 FlyBase G31039.1 GTAAATCCTATGGTTATTTATTTGCTGAGATTATATATTCTTATGTGCATGAATCTTTT 31 8735663 0.993303019 7 30 361 0.98 1.389166084 0.32 0.387096774 0.62 31 0 1 49 3R:8735628-8735686 6 23.5 2307 FBgn0037622 349.97 13.58666667 20.66666667 0.067148613 1.729636899 1.137096774 6 7 6.5 0.25 dme-miR-932-5p 8mer-A1 GGAATTGA 3R 8774371 8774378 - 3R_8774371_8774378_- 0.634423416 0.616112146 0.625267781 0.012948044 Pif1B FBtr0332503|FBtr0091716|FBtr0091717|FBtr0332504 8774284|8774284|8774284|8774284 8774612|8774612|8774612|8774612 3R - 8774356 8774515 3'utr Pif1B FlyBase G49033.1 TATAGCGTATTGATATGTAGTGTTTGTTAAGAGTTCTTTATCTGGAGGATACCAATTGAAATCGTCTGTACGTAGTGCTTTGCATAGTGCCTTAAATCGTAATAGTATATCGTAAGCAAATATCAATGCATTGTAATGGAATTGAAAGCAGGTGGCTTCA 162 8774379 0.984877627 22 155 1255 0.943877551 2.267171728 0.076530612 0.179012346 0.321428571 162 11 0 185 3R:8774356-8774515 8 Pif1B FBtr0332504|FBtr0091717|FBtr0091716|FBtr0332503 8774284|8774284|8774284|8774284 8774612|8774612|8774612|8774612 GGAATTGA 8mer-A1 dme-miR-932-5p 3R - 8774356 8774418 3'utr Pif1B FlyBase G37011.1 CGTAATAGTATATCGTAAGCAAATATCAATGCATTGTAATGGAATTGAAAGCAGGTGGCTTCA 100 8774379 0.76898868 7 90 740 0.927631579 1.547159121 0.059210526 0.35 0.572368421 100 8 3 141 3R:8774356-8774418 8 68.5 2308 FBgn0046874 160.93 2.47 3.813333333 0.425650904 27.73279352 17.96328671 1 1 1 0.25 dme-miR-277-3p 7mer-m8 TGCATTT 3R 8806074 8806080 + 3R_8806074_8806080_+ 0.600079308 0.607057409 0.603568358 0.004934262 Tcp-1eta FBtr0081918 8806018 8806234 3R + 8806037 8806111 3'utr Tcp-1eta FlyBase G41163.1 TCCAGAGAACACTACACCCTAATCATCAAAACTCACTTGCATTTCTCTCCTAATTTAACACGTACACGTATTACT 65 8806073 0.945176488 10 59 501 0.952941176 1.908485019 0.035294118 0.261538462 0.435294118 65 4 0 81 3R:8806037-8806111 7 Tcp-1eta FBtr0081918 8806018 8806234 TGCATTT 7mer-m8 dme-miR-277-3p 3R + 8806039 8806143 3'utr Tcp-1eta FlyBase G31058.1 CAGAGAACACTACACCCTAATCATCAAAACTCACTTGCATTTCTCTCCTAATTTAACACGTACACGTATTACTCGGTCATACCTTCGCATTTCGCACGCTTCGAA 34 8806073 0.986595955 13 32 271 0.954545455 1.62324929 0.068181818 0.235294118 0.409090909 34 2 0 42 3R:8806039-8806143 7 36 2309 FBgn0037632 3686.506667 229.3533333 352.0766667 0.009765342 0.156963056 0.102250457 1 1 1 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 8807216 8807223 + 3R_8807216_8807223_+ 0.566239089 0.57938773 0.572813409 0.009297464 hng2 FBtr0081919 8807182 8807581 3R + 8807187 8807258 3'utr hng2 FlyBase G41170.1 TTCACTACAGAAGTCAAATCATTTACAAATGCATTTACAAGAAGGGCAAAATTCGTTTAACAGCAAGTTAAC 16 8807216 0.96443678 5 15 79 1 1.278753601 0.315789474 0.1875 0.315789474 16 0 0 19 3R:8807187-8807258 8 hng2 FBtr0081919 8807182 8807581 TGCATTTA 8mer-A1 dme-miR-277-3p 3R + 8807195 8807249 3'utr hng2 FlyBase G31063.1 AGAAGTCAAATCATTTACAAATGCATTTACAAGAAGGGCAAAATTCGTTTAACAG 12 8807220 0.952218411 6 11 53 0.866666667 1.113943352 0.466666667 0.25 0.4 12 2 0 13 3R:8807195-8807249 8 8.5 2310 FBgn0037634 138.6666667 14.15666667 21.7 0.061298077 0.600423829 0.391705069 0 -4 -2 0.25 dme-miR-33-5p 6mer2-7 AATGCA 3R 8814154 8814159 - 3R_8814154_8814159_- 0.750576907 0.904195698 0.827386302 0.108624895 CG9821 FBtr0334659 8813488 8817862 3R - 8814107 8814176 3'utr CG9821 FlyBase G49075.1 CCAGATATTGCGACATAAATGCATGCAAAGTAAAATAAAACGATAAGCAACTTTACAGAGCCGAAGGGCA 25 8814156 0.962702372 8 25 125 1 1.462397998 0 0.16 0.275862069 25 0 0 29 3R:8814107-8814176 6 CG9821 FBtr0334659 8813488 8817862 AATGCA 6mer2-7 dme-miR-33-5p 3R - 8814145 8814182 3'utr CG9821 FlyBase G37040.1 AAACACCCAGATATTGCGACATAAATGCATGCAAAGTA 14 8814156 0.850563049 5 11 72 0.84 1.322219295 0.08 0.5 0.72 14 4 0 21 3R:8814145-8814182 6 18.5 2311 FBgn0037636 4388.82 121.91 186.95 0.004215256 0.151751292 0.09895694 -3 -3 -3 0.25 dme-miR-277-3p 7mer-m8 TGCATTT 3R 8815492 8815498 - 3R_8815492_8815498_- 0.615516546 0.614965095 0.615240821 0.000389899 CG9821 FBtr0081931|FBtr0334660|FBtr0334659 8814683|8814683|8813488 8817862|8817862|8817862 3R - 8815244 8815536 3'utr CG9821 FlyBase G49081.1 ACCCCACAGAAAGACCCAAAACTTGTCGCGCAGAATTTTGCATTTTTTTTAAGTGTAAGCAAAACGTTTGTTACTTACTGGACGTCAGTTTAAGCGGAGAACAGCTTAGATTTCATTGAAGCAGGATAGAGATACAGATGCAAAACCTATTTGTAAAATTCAAAAGAAGAGAAAACCACTTTACTTAAAACAGACCAAAACAGCCCAGATTCGCCCGCTCTGCCTTGGACTGTGGGCACAAACGTTCCGGCCCGCTGACTTTTTCAACACCAATCAGTACAAAATAATTTCCA 284 8815499 0.984709519 42 268 2152 0.93982808 1.913813852 0.283667622 0.169014085 0.323782235 284 18 3 328 3R:8815244-8815536 7 CG9821 FBtr0334659|FBtr0081931|FBtr0334660 8813488|8814683|8814683 8817862|8817862|8817862 TGCATTT 7mer-m8 dme-miR-277-3p 3R - 8815375 8815525 3'utr CG9821 FlyBase G37046.1 AGACCCAAAACTTGTCGCGCAGAATTTTGCATTTTTTTTAAGTGTAAGCAAAACGTTTGTTACTTACTGGACGTCAGTTTAAGCGGAGAACAGCTTAGATTTCATTGAAGCAGGATAGAGATACAGATGCAAAACCTATTTGTAAAATTCA 115 8815499 0.983829572 26 107 1106 0.915662651 2.181843588 0.391566265 0.339130435 0.542168675 115 14 0 152 3R:8815375-8815525 7 98.5 2312 FBgn0037636 4388.82 121.91 186.95 0.02244339 0.807973095 0.526878845 1 1 1 0.25 dme-bantam-3p 8mer-A1 TGATCTCA 3R 8817547 8817554 - 3R_8817547_8817554_- 0.627204895 0.627132314 0.627168605 5.13E-05 CG9821 FBtr0081931|FBtr0334660|FBtr0334659 8814683|8814683|8813488 8817862|8817862|8817862 3R - 8817404 8817579 3'utr CG9821 FlyBase G49088.1 AAAAAAAAAACAAGAGTAATGTTTGTGATCTCAAGTGTGTATCATAAAACAATTAAACCAATTTGAGAAGCTATTAGGTGAGAAGAGAAAAACTGTTTCAAGAAAAGAAAACTGAAAGCAAACAAAATACAAGTAAAAAACACACAAACTACTGTCCTCACACAACCGACCGACAA 1553 8817555 0.986457162 31 1472 12650 0.950578339 2.143255074 0.087276551 0.186735351 0.335962145 1553 82 12 1808 3R:8817404-8817579 8 CG9821 FBtr0334659|FBtr0081931|FBtr0334660 8813488|8814683|8814683 8817862|8817862|8817862 TGATCTCA 8mer-A1 dme-bantam-3p 3R - 8817411 8817633 3'utr CG9821 FlyBase G37051.1 AAAAAAAGCGAAAACATTTCAACTGGAAATTTGAACTTTTTTAAACAAAAACAAAAAAAAAAAACAAGAGTAATGTTTGTGATCTCAAGTGTGTATCATAAAACAATTAAACCAATTTGAGAAGCTATTAGGTGAGAAGAGAAAAACTGTTTCAAGAAAAGAAAACTGAAAGCAAACAAAATACAAGTAAAAAACACACAAACTACTGTCCTCACACAACCGA 1326 8817555 0.977850059 33 1250 10639 0.949243533 1.92719177 0.105417277 0.386877828 0.603221083 1326 82 22 1945 3R:8817411-8817633 8 1295 2313 FBgn0037636 4388.82 121.91 186.95 0.295067923 10.62259044 6.926985825 1 1 1 0.25 dme-bantam-3p 6mer3-8 TGATCT 3R 8822988 8822993 - 3R_8822988_8822993_- 0.967921129 0.980054662 0.973987895 0.008579751 CG9836 FBtr0081930 8822847 8823423 3R - 8822950 8823063 3'utr CG9836 FlyBase G49097.1 CGCGTGACTGCTGATAAGTGCATAGAAGTTTAGGAATCGTCTGTCATTGATACTAAAGGATAGCTGGAACTGATCTTGTATGAATGCATATGCACGTGTGTGTTTTGTAGGGGA 62 8822991 0.979749146 16 58 406 0.930555556 1.826074803 0.097222222 0.129032258 0.25 62 5 0 67 3R:8822950-8823063 6 CG9836 FBtr0081930 8822847 8823423 TGATCT 6mer3-8 dme-bantam-3p 3R - 8822968 8823048 3'utr CG9836 FlyBase G37067.1 AAGTGCATAGAAGTTTAGGAATCGTCTGTCATTGATACTAAAGGATAGCTGGAACTGATCTTGTATGAATGCATATGCACG 46 8822992 0.97224604 14 45 277 0.985915493 1.84509804 0.126760563 0.391304348 0.605633803 46 1 0 70 3R:8822968-8823048 6 38.5 2314 FBgn0037637 411.3666667 53.83333333 81.98666667 0.093590471 0.715170279 0.469588551 -2 -1 -1.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 8823403 8823408 - 3R_8823403_8823408_- 0.997149828 0.999064445 0.998107137 0.001353827 CG9836 FBtr0081930|FBtr0081930|FBtr0081930 8822847|8822847|8822847 8823423|8823423|8823423 3R - 8823365 8823437 stop_codon CG9836 FlyBase G49099.1 AGGTGGCCAACTGAGAGGCGGAACGGAATCTGTGAATGTAGTGGAGCGTTTCTCTGAACAACTACTAAAAAAA 315 8823409 0.955159775 9 307 1417 0.978378378 2.257678575 0.467567568 0.142857143 0.27027027 315 7 1 362 3R:8823365-8823437 6 CG9836 FBtr0081930|FBtr0081930|FBtr0081930 8822847|8822847|8822847 8823423|8823423|8823423 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 8823372 8823446 stop_codon CG9836 FlyBase G37069.1 AGCAGAAGAAGGTGGCCAACTGAGAGGCGGAACGGAATCTGTGAATGTAGTGGAGCGTTTCTCTGAACAACTACT 212 8823409 0.902667077 8 208 953 0.987878788 2.5132176 0.442424242 0.391509434 0.609090909 212 4 0 326 3R:8823372-8823446 6 253.5 2315 FBgn0037637 411.3666667 53.83333333 81.98666667 0.616238554 4.708978328 3.091966173 1 1 1 0.25 dme-miR-33-5p 7mer-A1 AATGCAA 3R 8827831 8827837 - 3R_8827831_8827837_- 0.776643386 0.779196822 0.777920104 0.001805526 pyd FBtr0305301|FBtr0310205|FBtr0305297|FBtr0305304|FBtr0305298|FBtr0305299|FBtr0305296|FBtr0305295 8827496|8827066|8827496|8827496|8827496|8827496|8827496|8827066 8828314|8828094|8828094|8828314|8828314|8828314|8828314|8828314 3R - 8827783 8827858 3'utr pyd FlyBase G49103.1 GAGCTAGAAATTAATCAATCGAATGCAATGGATACTTGTATAAAGCGACTAGAATTTAATTTCATACACAAATTAT 26 8827835 0.973883204 7 26 163 1 1.531478917 0.117647059 0.230769231 0.411764706 26 0 0 34 3R:8827783-8827858 7 pyd FBtr0305296|FBtr0305295|FBtr0305298|FBtr0305299|FBtr0305297|FBtr0305304|FBtr0305301|FBtr0310205 8827496|8827066|8827496|8827496|8827496|8827496|8827496|8827066 8828314|8828314|8828314|8828314|8828094|8828314|8828314|8828094 AATGCAA 7mer-A1 dme-miR-33-5p 3R - 8827788 8827925 3'utr pyd FlyBase G37074.1 AATTCGATATTGTCTGTTAATTGTGCCTTTAAGTGATCGTTTGGCTCTGCCTCTGAACTATTATATCGAGCTAGAAATTAATCAATCGAATGCAATGGATACTTGTATAAAGCGACTAGAATTTAATTTCATACACAA 48 8827835 0.982303009 23 45 371 0.961038961 1.392110465 0.12987013 0.375 0.61038961 48 1 2 74 3R:8827788-8827925 7 22.5 2316 FBgn0262614 694.76 11.98333333 18.49333333 0.032385284 1.877607789 1.21665465 -2 -2 -2 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3R 8942452 8942458 + 3R_8942452_8942458_+ 0.386276421 0.518035277 0.452155849 0.093167612 skap FBtr0334328|FBtr0334327 8942073|8942073 8942557|8942557 3R + 8942412 8942471 3'utr skap FlyBase G41209.1 ACGTGAATAATAGAAAATGGAAATGAAAATACGTTTTAATTGTGATTTTTGCAAAAGTTC 29 8942458 0.991705167 6 27 299 0.948717949 1.267171728 0.358974359 0.206896552 0.41025641 29 1 1 37 3R:8942412-8942471 7 skap FBtr0334328|FBtr0334327 8942073|8942073 8942557|8942557 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 8942403 8942539 3'utr skap FlyBase G31087.1 ATTAATTGCACGTGAATAATAGAAAATGGAAATGAAAATACGTTTTAATTGTGATTTTTGCAAAAGTTCATTTAAATTTTATTTATTGAAATGTGACCCTGCTTTTAAAGCAGATCCATCATCTTGTGTATTATCCT 41 8942451 0.991400554 16 39 410 0.943396226 1.698970004 0.264150943 0.219512195 0.396226415 41 3 0 50 3R:8942403-8942539 7 26.5 2317 FBgn0037643 1428.996667 91.75333333 140.5033333 0.01854448 0.288817845 0.188607625 -6 1 -2.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 8982673 8982680 + 3R_8982673_8982680_+ 0.633275861 0.628580989 0.630928425 0.003319796 CAHbeta FBtr0340014|FBtr0340014|FBtr0340014 8981922|8981922|8981922 8982793|8982793|8982793 3R + 8982587 8982709 3'utr CAHbeta FlyBase G41212.1 GATGAAGACACCGTGGATCGATTGTCCGAGGAGGTCAGAAGATTCTATTCGTAGGCGAAACATGCCAAGAGGACCAAATGGATTATCTGTGATATGTGGGCCTTATACCGCGATCGGCATTTA 144 8982672 0.964113334 14 134 1299 0.93452381 1.894869657 0.107142857 0.118055556 0.244047619 144 10 1 157 3R:8982587-8982709 8 CAHbeta FBtr0340014|FBtr0340014|FBtr0340014 8981922|8981922|8981922 8982793|8982793|8982793 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 8982639 8982699 3'utr CAHbeta FlyBase G31089.1 AGGCGAAACATGCCAAGAGGACCAAATGGATTATCTGTGATATGTGGGCCTTATACCGCGA 97 8982672 0.869174298 11 92 907 0.955128205 1.571126277 0.102564103 0.381443299 0.615384615 97 4 3 149 3R:8982639-8982699 8 113 2318 FBgn0037646 43.33333333 4.79 7.23 2.607692308 23.5908142 15.62932227 1 1 1 0.25 dme-miR-7-5p 6mer2-7 TCTTCC 3R 9017720 9017725 - 3R_9017720_9017725_- 0.487552826 0.836939308 0.662246067 0.247053563 tgo FBtr0082005|FBtr0336755 9016771|9017245 9017753|9017753 3R - 9017665 9017743 3'utr tgo FlyBase G49217.1 ATTTCTTTCGATTCCCACTCTTCCCCCGTCCCGCAACTTAATCTGTGTCTCTCTTAACCACTTCTCAAGTGCAATCCAT 12 9017723 0.981112032 7 12 89 1 1.146128036 0.142857143 0.166666667 0.285714286 12 0 0 14 3R:9017665-9017743 6 tgo FBtr0082005|FBtr0336755 9016771|9017245 9017753|9017753 TCTTCC 6mer2-7 dme-miR-7-5p 3R - 9017688 9017741 3'utr tgo FlyBase G37157.1 TTCTTTCGATTCCCACTCTTCCCCCGTCCCGCAACTTAATCTGTGTCTCTCTTA 8 9017732 0.983815836 4 7 64 0.9 0.954242509 0.2 0.25 0.4 8 1 0 9 3R:9017688-9017741 6 7.5 2319 FBgn0264075 208 8.796666667 13.4 0.036057692 0.85259568 0.559701493 -2 7 2.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 9020972 9020979 - 3R_9020972_9020979_- 0.628744228 0.628246542 0.628495385 0.000351927 neur FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002|FBtr0300414 9020346|9020346|9020346|9020346|9020721 9021792|9021792|9021792|9021792|9021792 3R - 9020954 9021023 3'utr neur FlyBase G49227.1 GTTTAAAGTTAATATTAGTCTAGCCCTAAGTACTTAAGTTAATTTCTAGTCAACGAATTATGCTGAAGTT 100 9020980 0.98176363 8 93 688 0.936507937 1.594760753 0.03968254 0.18 0.349206349 100 6 2 118 3R:9020954-9021023 8 neur FBtr0300414|FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002 9020721|9020346|9020346|9020346|9020346 9021792|9021792|9021792|9021792|9021792 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R - 9020953 9020989 3'utr neur FlyBase G37163.1 TAAGTTAATTTCTAGTCAACGAATTATGCTGAAGTTA 95 9020980 0.80044952 4 93 619 0.973509934 2.167317335 0.039735099 0.410526316 0.629139073 95 4 0 147 3R:9020953-9020989 8 95.5 2320 FBgn0002932 466.07 14.63 22.51666667 0.204904843 6.527682843 4.241302739 1 1 1 0.25 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 3R 9021265 9021272 - 3R_9021265_9021272_- 0.624428712 0.62421139 0.624320051 0.000153654 neur FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002|FBtr0300414 9020346|9020346|9020346|9020346|9020721 9021792|9021792|9021792|9021792|9021792 3R - 9021251 9021291 3'utr neur FlyBase G49229.1 ATTTGGCGATTAATCATTTTGGTGCTAAATGTTTTGAAAGG 37 9021273 0.723439899 5 37 361 1 1.681241237 0.270833333 0.243243243 0.416666667 37 0 0 48 3R:9021251-9021291 8 neur FBtr0300414|FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002 9020721|9020346|9020346|9020346|9020346 9021792|9021792|9021792|9021792|9021792 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 3R - 9021250 9021290 3'utr neur FlyBase G37164.1 TTTGGCGATTAATCATTTTGGTGCTAAATGTTTTGAAAGGC 31 9021273 0.725945473 2 31 290 1 1.662757832 0.347826087 0.322580645 0.543478261 31 0 0 46 3R:9021250-9021290 8 34 2321 FBgn0002932 466.07 14.63 22.51666667 0.072950415 2.323991798 1.509992598 1 1 1 0.25 dme-miR-11-3p 7mer-m1 TGTGATG 3R 9021555 9021561 - 3R_9021555_9021561_- 0.610199296 0.611445239 0.610822268 0.000880984 neur FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002|FBtr0300414 9020346|9020346|9020346|9020346|9020721 9021792|9021792|9021792|9021792|9021792 3R - 9021504 9021579 3'utr neur FlyBase G49230.1 ACGTATGTTTAATTTTTTTGTGATGTTATAAGTAAGTGCGCCCCAGAGCCAAAACTATGTATTGTTCAATCCAACA 26 9021562 0.804586544 7 22 304 0.866666667 1.113943352 0.233333333 0.115384615 0.233333333 26 3 1 26 3R:9021504-9021579 7 neur FBtr0300414|FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002 9020721|9020346|9020346|9020346|9020346 9021792|9021792|9021792|9021792|9021792 TGTGATG 7mer-m1 dme-miR-11-3p 3R - 9021503 9021611 3'utr neur FlyBase G37165.1 TTAGTGTATGAAACTATCAACTAATTTATCACACGTATGTTTAATTTTTTTGTGATGTTATAAGTAAGTGCGCCCCAGAGCCAAAACTATGTATTGTTCAATCCAACAA 24 9021563 0.993717466 12 22 268 0.925 1.267171728 0.2 0.5 0.7 24 2 1 37 3R:9021503-9021611 7 20 2322 FBgn0002932 466.07 14.63 22.51666667 0.042912009 1.367053999 0.88823094 1 2 1.5 0.25 dme-miR-33-5p 8mer-m1 CAATGCAC 3R 9068884 9068891 - 3R_9068884_9068891_- 0.556834512 0.538082121 0.547458316 0.013259949 pum FBtr0081993|FBtr0333668|FBtr0333667 9067576|9066341|9066341 9070944|9070944|9070944 3R - 9068869 9068943 3'utr pum FlyBase G49275.2 ATTTGTTTGGTACTTTTAGTTATTAACTTGTCAACTGCCTGTCTCTAGAGCGCAATGCACTGATAATTTTAATTT 46 9068904 0.759314812 11 39 380 0.86 1.33243846 0.14 0.086956522 0.16 46 6 1 43 3R:9068869-9068943 8 pum FBtr0333667|FBtr0333668|FBtr0081993 9066341|9066341|9067576 9070944|9070944|9070944 CAATGCAC 8mer-m1 dme-miR-33-5p 3R - 9068868 9068935 3'utr pum FlyBase G37214.1 GGTACTTTTAGTTATTAACTTGTCAACTGCCTGTCTCTAGAGCGCAATGCACTGATAATTTTAATTTA 28 9068888 0.837034004 12 27 234 0.977777778 1.643452676 0.311111111 0.357142857 0.6 28 1 0 44 3R:9068868-9068935 8 21.5 2323 FBgn0003165 2989.103333 65.03333333 99.94333333 0.007192792 0.330599692 0.215121902 13 -3 5 0.25 dme-miR-1006-3p 8mer-A1 CGAATTTA 3R 9069318 9069325 - 3R_9069318_9069325_- 0.601697796 0.671633993 0.636665894 0.049452361 pum FBtr0081993|FBtr0333668|FBtr0333667 9067576|9066341|9066341 9070944|9070944|9070944 3R - 9069292 9069416 3'utr pum FlyBase G49277.1 CATTTTTGATATAAATTTAGATTACTTCGCGACGCCTTATTCCAAATACTAAAATACTGAAAATAATGAAAACGAGAGATGGTAAGAAAATCGAATTTAGACTTTTTTGTCGGTTTCGTCGAAAC 27 9069325 0.908371165 9 24 200 0.931034483 1.431363764 0.413793103 0.074074074 0.137931034 27 2 0 27 3R:9069292-9069416 8 pum FBtr0333667|FBtr0333668|FBtr0081993 9066341|9066341|9067576 9070944|9070944|9070944 CGAATTTA 8mer-A1 dme-miR-1006-3p 3R - 9069306 9069337 3'utr pum FlyBase G37215.1 TGGTAAGAAAATCGAATTTAGACTTTTTTGTC 7 9069326 0.970650807 3 6 53 0.857142857 0.77815125 0.285714286 0 0 7 1 0 6 3R:9069306-9069337 8 9 2324 FBgn0003165 2989.103333 65.03333333 99.94333333 0.003010936 0.138390569 0.090051029 0 1 0.5 0.25 dme-miR-2b-2-5p 6mer2-7 TGAAGA 3R 9070370 9070375 - 3R_9070370_9070375_- 0.911721915 0.604315281 0.758018598 0.217369291 pum FBtr0081993|FBtr0305197|FBtr0333668|FBtr0081994|FBtr0081990|FBtr0081992|FBtr0333667|FBtr0081991 9067576|9069755|9066341|9069755|9069755|9069755|9066341|9069755 9070944|9070944|9070944|9070944|9070944|9070944|9070944|9070944 3R - 9070369 9070442 3'utr pum FlyBase G49281.1 AATTATTATATAGCAAGTCTATCTGTAAATGATTAATGTTTCGACTGTAAATTAATAAGAAGACAACTGAAGAG 10 9070403 0.98930707 7 9 86 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 3R:9070369-9070442 6 pum FBtr0333667|FBtr0081991|FBtr0081990|FBtr0081992|FBtr0333668|FBtr0081994|FBtr0081993|FBtr0305197 9066341|9069755|9069755|9069755|9066341|9069755|9067576|9069755 9070944|9070944|9070944|9070944|9070944|9070944|9070944|9070944 TGAAGA 6mer2-7 dme-miR-2b-2-5p 3R - 9070358 9070416 3'utr pum FlyBase G37220.1 AAATGATTAATGTTTCGACTGTAAATTAATAAGAAGACAACTGAAGAGCCGGCGAGCTG 10 9070395 0.972702496 6 10 49 1 1.322219295 0.19047619 0.7 0.857142857 10 0 0 21 3R:9070358-9070416 6 2.5 2325 FBgn0003165 2989.103333 65.03333333 99.94333333 0.000836371 0.038441825 0.025014175 28 20 24 0.25 dme-miR-965-3p 7mer-m8 TACGCTT 3R 9262231 9262237 + 3R_9262231_9262237_+ 0.608567458 0.61963718 0.614102319 0.00782746 VhaM8.9 FBtr0081978 9262171 9262590 3R + 9262202 9262590 3'utr VhaM8.9 FlyBase G41311.1 GGAGCAGGAGGAGCGAGAGGAGCTTGCGTTACGCTTTGTTATTTCGTCCCCCTTTTAAGTTGAAATTTGCCAACTTCTACTTCAATCCAACAGCGGATAAATTGTGTGTTTGTGTGTGTGCGGACAGCTGTCGCAGTAGTTGGTTTTATTATCTATAAATAAGTATTAAAAAACTTTTCAGTTTTCAATGCAGTTGCGGGCGTCGCAACAATTCCATAGAAATTTGTTACATTTTCCTGTTTTGTTGTACTTTTTAGGTTTATATATATATACGAATATGCACAACATACTCGCCAAGTCAGTCAGTTCTTCAAACGATTCATCATATGTAAATTATCAAAATGTGAAGTGTTGAAAAGTAAAGTTAAATATATATAGCCTAAAAAGAC 245 9262243 0.986978018 54 234 2045 0.954063604 1.954242509 0.130742049 0.126530612 0.243816254 245 11 2 270 3R:9262202-9262590 7 VhaM8.9 FBtr0081978 9262171 9262590 TACGCTT 7mer-m8 dme-miR-965-3p 3R + 9262203 9262537 3'utr VhaM8.9 FlyBase G31173.1 GAGCAGGAGGAGCGAGAGGAGCTTGCGTTACGCTTTGTTATTTCGTCCCCCTTTTAAGTTGAAATTTGCCAACTTCTACTTCAATCCAACAGCGGATAAATTGTGTGTTTGTGTGTGTGCGGACAGCTGTCGCAGTAGTTGGTTTTATTATCTATAAATAAGTATTAAAAAACTTTTCAGTTTTCAATGCAGTTGCGGGCGTCGCAACAATTCCATAGAAATTTGTTACATTTTCCTGTTTTGTTGTACTTTTTAGGTTTATATATATATACGAATATGCACAACATACTCGCCAAGTCAGTCAGTTCTTCAAACGATTCATCATATGTAAATTA 196 9262240 0.987083951 41 182 1597 0.942028986 2.414973348 0.09057971 0.31122449 0.510869565 196 16 0 260 3R:9262203-9262537 7 119 2326 FBgn0037671 995.7833333 82.36 125.1466667 0.119503908 1.444876153 0.950884296 -12 -9 -10.5 0.25 dme-miR-932-5p 7mer-A1 GAATTGA 3R 9265156 9265162 - 3R_9265156_9265162_- 0.576645451 0.581945769 0.57929561 0.003747878 Aats-trp FBtr0081981 9265025 9265303 3R - 9265098 9265182 3'utr Aats-trp FlyBase G49330.1 TCTATGTAAATAGCTATACAGAATTGATCTATGCCTTGGCTCTGAGTCCGTGTGGCGCCCACTTAATGCATCGTTGTACTCGCTA 188 9265159 0.816930697 15 173 1501 0.92760181 1.834632606 0.045248869 0.14893617 0.2760181 188 14 2 205 3R:9265098-9265182 7 Aats-trp FBtr0081981 9265025 9265303 GAATTGA 7mer-A1 dme-miR-932-5p 3R - 9265097 9265182 3'utr Aats-trp FlyBase G37261.1 TCTATGTAAATAGCTATACAGAATTGATCTATGCCTTGGCTCTGAGTCCGTGTGGCGCCCACTTAATGCATCGTTGTACTCGCTAT 115 9265159 0.825906891 12 108 907 0.924731183 2.235528447 0.032258065 0.426086957 0.64516129 115 14 0 172 3R:9265097-9265182 7 129.5 2327 FBgn0010803 589.9133333 43.03333333 65.91666667 0.219523772 3.00929512 1.96460177 -3 -3 -3 0.25 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 9337092 9337099 + 3R_9337092_9337099_+ 0.589390491 0.590496574 0.589943533 0.000782131 CG8121 FBtr0082019|FBtr0082017|FBtr0082018 9336879|9336879|9336879 9337256|9337459|9337256 3R + 9337060 9337123 3'utr CG8121 FlyBase G41326.1 CCGCGAATCAGCGTAATTAGTTGTAAGTCTATTCCGTCCAAACGCATATGTTTTTTGTATACTG 2080 9337091 0.771501834 9 2052 17253 0.987304274 2.367914739 0.185780787 0.118269231 0.223867964 2080 21 9 2333 3R:9337060-9337123 8 CG8121 FBtr0082018|FBtr0082019|FBtr0082017 9336879|9336879|9336879 9337256|9337256|9337459 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R + 9337063 9337146 3'utr CG8121 FlyBase G31184.1 CGAATCAGCGTAATTAGTTGTAAGTCTATTCCGTCCAAACGCATATGTTTTTTGTATACTGTTGAAGAATCGCTGTCTTTATGT 1227 9337091 0.793610762 11 1204 9760 0.984324324 2.260309946 0.165945946 0.380603097 0.589189189 1227 20 9 1821 3R:9337063-9337146 8 1650 2328 FBgn0037680 158.3566667 13.87333333 21.06666667 10.41951712 118.9332052 78.32278481 1 1 1 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 3R 9368024 9368029 - 3R_9368024_9368029_- 0.918263101 0.999120933 0.958692017 0.057175099 FER FBtr0333295|FBtr0082054|FBtr0082053|FBtr0082051|FBtr0082052|FBtr0333296 9367601|9367601|9367601|9367601|9367601|9367601 9368240|9368240|9368240|9368240|9368240|9368240 3R - 9367962 9368079 3'utr FER FlyBase G49345.1 ATATATATTTTCTAGCCATGTAAATGTAAATTTCGATGTGTACTGTAGTGTGTGTTTGCCTGACTGAGCGTATGTTATAAATCCTTAATGTGCCAAAAACCGCAAGAGATCTTAAAAC 50 9368022 0.983521793 18 49 380 0.981481481 1.72427587 0.185185185 0.08 0.148148148 50 1 0 53 3R:9367962-9368079 6 FER FBtr0082052|FBtr0333296|FBtr0082053|FBtr0082051|FBtr0333295|FBtr0082054 9367601|9367601|9367601|9367601|9367601|9367601 9368240|9368240|9368240|9368240|9368240|9368240 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 9367976 9368077 3'utr FER FlyBase G37273.1 ATATATTTTCTAGCCATGTAAATGTAAATTTCGATGTGTACTGTAGTGTGTGTTTGCCTGACTGAGCGTATGTTATAAATCCTTAATGTGCCAAAAACCGCA 26 9368021 0.988657695 13 24 224 0.888888889 1.505149978 0.416666667 0.346153846 0.527777778 26 4 0 32 3R:9367976-9368077 6 23 2329 FBgn0000723 580.6066667 19.26 29.57333333 0.039613737 1.194184839 0.777727683 -7 -8 -7.5 0.25 dme-miR-276a-3p 6mer2-7 GTTCCT 3R 9407808 9407813 + 3R_9407808_9407813_+ 0.998527878 0.994744596 0.996636237 0.002675197 CG8135 FBtr0082030 9407708 9407857 3R + 9407741 9407825 3'utr CG8135 FlyBase G41359.1 TCGTTACCGAGTATCTCAATATTTCGCTCGCGCTTAAGTATTTCCCGATGCCACTGCTGCTGCTGCTGTTCCTTTACACCCATGT 39 9407814 0.982540892 12 37 357 0.954545455 1.62324929 0.045454545 0.128205128 0.227272727 39 2 0 42 3R:9407741-9407825 6 CG8135 FBtr0082030 9407708 9407857 GTTCCT 6mer2-7 dme-miR-276a-3p 3R + 9407765 9407825 3'utr CG8135 FlyBase G31212.1 CGCTCGCGCTTAAGTATTTCCCGATGCCACTGCTGCTGCTGCTGTTCCTTTACACCCATGT 32 9407802 0.766737283 11 29 303 0.953488372 1.311753861 0 0.25 0.441860465 32 1 1 41 3R:9407765-9407825 6 27.5 2330 FBgn0037689 259 11.38666667 17.50333333 0.106177606 2.415105386 1.571129309 -6 6 0 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 9417032 9417038 + 3R_9417032_9417038_+ 0.735447346 0.764094582 0.749770964 0.0202567 alpha-Man-II FBtr0082031|FBtr0082031|FBtr0082031|FBtr0334302|FBtr0334302|FBtr0334302 9416737|9416737|9416737|9416737|9416737|9416737 9417264|9417264|9417264|9417264|9417264|9417264 3R + 9417023 9417061 3'utr alpha-Man-II FlyBase G41367.1 ACGTTTTTTTGTGATATCCATCCAGTCCCACAGCAAGCA 10 9417043 0.954162842 4 10 57 1 1 0.3 0 0 10 0 0 10 3R:9417023-9417061 7 alpha-Man-II FBtr0334302|FBtr0334302|FBtr0334302|FBtr0082031|FBtr0082031|FBtr0082031 9416737|9416737|9416737|9416737|9416737|9416737 9417264|9417264|9417264|9417264|9417264|9417264 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 9417023 9417060 3'utr alpha-Man-II FlyBase G31216.1 ACGTTTTTTTGTGATATCCATCCAGTCCCACAGCAAGC 12 9417031 0.958834939 3 12 90 1 1.255272505 0.166666667 0.5 0.666666667 12 0 0 18 3R:9417023-9417060 7 10.5 2331 FBgn0011740 533.3733333 16.09 24.62333333 0.019686024 0.652579242 0.4264248 -11 1 -5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 9446922 9446929 + 3R_9446922_9446929_+ 0.627603027 0.627659341 0.627631184 3.98E-05 ps FBtr0082037|FBtr0111030 9446525|9446525 9449468|9449468 3R + 9446714 9446998 3'utr ps FlyBase G41395.1 TAATTTGGCCCTAGAGCCCATTAGACATAGAAACAAAAGCCAAGCAGACACAGGCACATCATTGCAGACTCATTCCAGAGAGAGAAAAGAGGGTACGACTTATTGAGAGAGATATCCCATTCTAAGCATACAACGCATTCCGTGAGACATTCCGATAGACATTCGCAAAGGCTTTCCCAATAAATTCATTGACACTTATAGCGAAATTTCTAGTCAAGTTCTTGCCTCTCACCCATCCGCCAGCATATATGATCCATGATCCATGATCCGTCTTCGATATTGCAC 1093 9446921 0.966116545 44 1050 8281 0.965883245 2.628048173 0.081122062 0.16010979 0.304018196 1093 43 2 1274 3R:9446714-9446998 8 ps FBtr0082037|FBtr0111030 9446525|9446525 9449468|9449468 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 9446751 9446954 3'utr ps FlyBase G31242.1 AGCCAAGCAGACACAGGCACATCATTGCAGACTCATTCCAGAGAGAGAAAAGAGGGTACGACTTATTGAGAGAGATATCCCATTCTAAGCATACAACGCATTCCGTGAGACATTCCGATAGACATTCGCAAAGGCTTTCCCAATAAATTCATTGACACTTATAGCGAAATTTCTAGTCAAGTTCTTGCCTCTCACCCATCCGCC 612 9446921 0.982250215 24 587 4363 0.962039046 2.470802365 0.093275488 0.35130719 0.569414317 612 33 2 887 3R:9446751-9446954 8 755 2332 FBgn0261552 4666.596667 115.7866667 177.5266667 0.161788141 6.520612621 4.252882196 1 1 1 0.25 dme-miR-92b-3p 8mer-m1 GTGCAATT 3R 9447239 9447246 + 3R_9447239_9447246_+ 0.485838828 0.523526364 0.504682596 0.026649158 ps FBtr0082037|FBtr0111030 9446525|9446525 9449468|9449468 3R + 9447049 9447262 3'utr ps FlyBase G41396.1 CCCAACCCAGAAAATTCGCACAGAACAGCAGCATCCGATAGCTTAGGATTATAAGGCAGTAATTAGGTTTAGCAGTTAGGTTGTGCATTGAGTAGATTGAATAAAACACATTCACTTTTCCATGTTGTTTAGGCCTAACGAATTTGTTCGATATACTTACGTGTAGCTGGGCGGATCGCCCAGTTGGCTAGTGCAATTCGTGGGTAACCATGCG 97 9447233 0.984852961 35 84 664 0.885964912 2.004321374 0.201754386 0.164948454 0.289473684 97 13 0 101 3R:9447049-9447262 8 ps FBtr0082037|FBtr0111030 9446525|9446525 9449468|9449468 GTGCAATT 8mer-m1 dme-miR-92b-3p 3R + 9447166 9447264 3'utr ps FlyBase G31245.1 TTCCATGTTGTTTAGGCCTAACGAATTTGTTCGATATACTTACGTGTAGCTGGGCGGATCGCCCAGTTGGCTAGTGCAATTCGTGGGTAACCATGCGTA 33 9447233 0.975344911 14 33 207 1 1.755874856 0.192982456 0.424242424 0.666666667 33 0 0 57 3R:9447166-9447264 8 29.5 2333 FBgn0261552 4666.596667 115.7866667 177.5266667 0.006321523 0.254778904 0.166172218 6 6 6 0.25 dme-miR-1012-3p 7mer-m8 TTGACTA 3R 9449927 9449933 + 3R_9449927_9449933_+ 0.357334795 0.410370144 0.38385247 0.03750162 ps FBtr0111032|FBtr0302692|FBtr0344283 9447848|9447848|9447848 9455500|9455500|9455500 3R + 9449918 9449944 3'utr ps FlyBase G41412.1 AAATAAAATTTGACTACAAAACCAACA 7 9449927 0.95609763 3 5 23 0.8 0.903089987 0 0.428571429 0.6 7 2 0 8 3R:9449918-9449944 7 ps FBtr0111032|FBtr0344283|FBtr0302692 9447848|9447848|9447848 9455500|9455500|9455500 TTGACTA 7mer-m8 dme-miR-1012-3p 3R + 9449910 9449940 3'utr ps FlyBase G31255.1 CGAAATTTAAATAAAATTTGACTACAAAACC 5 9449927 0.900985604 2 5 22 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3R:9449910-9449940 7 5.5 2334 FBgn0261552 4666.596667 115.7866667 177.5266667 0.001178589 0.047501152 0.030981261 0 0 0 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 9451274 9451281 + 3R_9451274_9451281_+ 0.544078233 0.580139206 0.56210872 0.025498978 ps FBtr0111032|FBtr0111032|FBtr0111032|FBtr0302692|FBtr0302692|FBtr0302692|FBtr0344283|FBtr0344283|FBtr0344283 9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848 9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500 3R + 9451253 9451297 3'utr ps FlyBase G41415.2 ATACTTATATTTGTACTGGATCTGTGATATGTATTTAAAAACAAC 198 9451273 0.833646553 11 193 2175 0.974358974 2.357934847 0.05982906 0.176767677 0.303418803 198 6 0 228 3R:9451253-9451297 8 ps FBtr0111032|FBtr0111032|FBtr0111032|FBtr0344283|FBtr0344283|FBtr0344283|FBtr0302692|FBtr0302692|FBtr0302692 9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848 9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 9451253 9451301 3'utr ps FlyBase G31256.1 ATACTTATATTTGTACTGGATCTGTGATATGTATTTAAAAACAACAAAG 159 9451273 0.795989041 12 153 1644 0.974895397 2.367355921 0.129707113 0.364779874 0.577405858 159 6 0 233 3R:9451253-9451301 8 177.5 2335 FBgn0261552 4666.596667 115.7866667 177.5266667 0.038036285 1.532991709 0.999849788 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 9453053 9453059 + 3R_9453053_9453059_+ 0.796062112 0.799643714 0.797852913 0.002532574 ps FBtr0111032|FBtr0111032|FBtr0111032|FBtr0302692|FBtr0302692|FBtr0302692|FBtr0344283|FBtr0344283|FBtr0344283 9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848 9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500 3R + 9453030 9453070 3'utr ps FlyBase G41419.1 AAGGTATAAAACGTAGTCGTTAGTGTGATAAATAAAATTAA 11 9453051 0.976462237 6 11 78 1 1.113943352 0.076923077 0.181818182 0.307692308 11 0 0 13 3R:9453030-9453070 7 ps FBtr0111032|FBtr0111032|FBtr0111032|FBtr0344283|FBtr0344283|FBtr0344283|FBtr0302692|FBtr0302692|FBtr0302692 9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848 9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 9453016 9453071 3'utr ps FlyBase G31258.1 ATACACATACACTAAAGGTATAAAACGTAGTCGTTAGTGTGATAAATAAAATTAAT 8 9453052 0.975598725 4 8 52 1 1.041392685 0.181818182 0.375 0.545454545 8 0 0 11 3R:9453016-9453071 7 8.5 2336 FBgn0261552 4666.596667 115.7866667 177.5266667 0.001821456 0.073410871 0.047880131 2 1 1.5 0.25 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3R 9506042 9506047 - 3R_9506042_9506047_- 0.798110277 0.864604851 0.831357564 0.047018783 rump FBtr0304684|FBtr0082123 9505851|9505851 9507316|9506143 3R - 9506025 9506155 stop_codon rump FlyBase G49389.1 ACATACTTTTAAGTCAGGCAATTCAGTTCAAAAGTTATTCTACGTTTCTTGTCGCCAATTCACACTTCAAACAGCGCGATGACCAATGAAATGAGCTGATATTCCTTATTTGACTCGCAATACGGAATTAA 30 9506045 0.984167922 11 29 228 0.96875 1.491361694 0.3125 0.066666667 0.125 30 1 0 31 3R:9506025-9506155 6 rump FBtr0304684|FBtr0082123 9505851|9505851 9507316|9506143 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3R - 9506025 9506084 3'utr rump FlyBase G37306.1 CAGCGCGATGACCAATGAAATGAGCTGATATTCCTTATTTGACTCGCAATACGGAATTAA 15 9506046 0.828823174 8 15 100 1 1.322219295 0.238095238 0.266666667 0.476190476 15 0 0 21 3R:9506025-9506084 6 11.5 2337 FBgn0267790 1132.323333 61.17 93.53666667 0.01015611 0.188000654 0.122946438 -2 -1 -1.5 0.25 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 9507272 9507278 - 3R_9507272_9507278_- 0.708509738 0.707557824 0.708033781 0.000673095 rump FBtr0304684 9505851 9507316 3R - 9507095 9507364 stop_codon rump FlyBase G49398.2 AGAAGCTCAAGCAGGTCTTCAAGCTGGCCGGCAAGGTGCAGAGCGTAGACCTTTCACTGGACAAGGAGGGCAACAGCCGCGGTTTTGCTGTGATCGAGTACGACCATCCGGTGGAGGCTGTTCAGGCCATTTCCATGCTGGATCGTCAGATGCTATTCGACCGTCGTATGACCGTGCGCCTGGACCGAATTCCGGATAAGAATGAAGGCATAAAGCTGCCCGAGGGCTTGGGAGGTGTGGGCATCGGCCTGGGACCCAACGGCGAGCCAC 159 9507280 0.994492437 32 153 828 0.97382199 1.792391689 0.188481675 0.169811321 0.308900524 159 3 2 186 3R:9507095-9507364 7 rump FBtr0304684 9505851 9507316 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R - 9507131 9507318 stop_codon rump FlyBase G37314.1 AGACCTTTCACTGGACAAGGAGGGCAACAGCCGCGGTTTTGCTGTGATCGAGTACGACCATCCGGTGGAGGCTGTTCAGGCCATTTCCATGCTGGATCGTCAGATGCTATTCGACCGTCGTATGACCGTGCGCCTGGACCGAATTCCGGATAAGAATGAAGGCATAAAGCTGCCCGAGGGCTTGGGAG 89 9507280 0.973948721 21 82 503 0.943262411 2.123851641 0.219858156 0.449438202 0.65248227 89 8 0 133 3R:9507131-9507318 7 67.5 2338 FBgn0267790 1132.323333 61.17 93.53666667 0.059611948 1.103482099 0.721642137 2 2 2 0.25 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 9536064 9536070 - 3R_9536064_9536070_- 0.397200772 0.365277016 0.381238894 0.022573535 mura FBtr0082116 9535623 9539095 3R - 9536022 9536096 3'utr mura FlyBase G49422.1 ACAAACAAAAAAAATTATAAAGTTTTGCTGTGATGTACGTTATATATATTTAATTACATAAAATGCAATAAAATT 185 9536072 0.991835807 10 178 1989 0.964444444 2.035429738 0.062222222 0.183783784 0.328888889 185 7 1 217 3R:9536022-9536096 7 mura FBtr0082116 9535623 9539095 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R - 9536043 9536096 3'utr mura FlyBase G37344.1 ACAAACAAAAAAAATTATAAAGTTTTGCTGTGATGTACGTTATATATATTTAAT 135 9536072 0.891468887 10 128 1418 0.930693069 2.274157849 0.059405941 0.333333333 0.554455446 135 14 0 188 3R:9536043-9536096 7 158.5 2339 FBgn0037705 215.4033333 4.16 6.31 0.73582891 38.10096154 25.11885895 2 2 2 0.25 dme-miR-79-3p 6mer3-8 TAGCTT 3R 9538817 9538822 - 3R_9538817_9538822_- 0.995718242 0.765128566 0.880423404 0.16305147 mura FBtr0082118|FBtr0082117|FBtr0082116 9538152|9538152|9535623 9539095|9539095|9539095 3R - 9538766 9538840 3'utr mura FlyBase G49428.1 AACTCGCCGCCTCTTCAATAGCTTGTCTTAGACATTAGTTCGTATGTGAGTAATGGTAACCGTAATTAGGAGTAA 24 9538822 0.987243422 7 24 208 1 1.397940009 0 0.041666667 0.08 24 0 0 25 3R:9538766-9538840 6 mura FBtr0082118|FBtr0082117|FBtr0082116 9538152|9538152|9535623 9539095|9539095|9539095 TAGCTT 6mer3-8 dme-miR-79-3p 3R - 9538795 9538838 3'utr mura FlyBase G37348.1 CTCGCCGCCTCTTCAATAGCTTGTCTTAGACATTAGTTCGTATG 13 9538813 0.845101812 4 10 116 0.823529412 0.84509804 0.058823529 0.230769231 0.411764706 13 2 1 14 3R:9538795-9538838 6 16.5 2340 FBgn0037705 215.4033333 4.16 6.31 0.076600486 3.966346154 2.614896989 0 -9 -4.5 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 9557507 9557514 + 3R_9557507_9557514_+ 0.625363274 0.571518192 0.598440733 0.038074235 CG8199 FBtr0082067 9557435 9557776 3R + 9557435 9557527 stop_codon CG8199 FlyBase G41466.2 AGATTCCAGATAGGTGCCATAAAGATGCTAACAAATCAGAAATCAAAACGAACCGAGAGACTCGATCGAAAGTGCATTTATTATGATTAAGCA 26 9557513 0.873772367 11 21 135 0.909090909 1.176091259 0.212121212 0.153846154 0.333333333 26 2 1 30 3R:9557435-9557527 8 CG8199 FBtr0082067 9557435 9557776 TGCATTTA 8mer-A1 dme-miR-277-3p 3R + 9557471 9557533 3'utr CG8199 FlyBase G31285.2 CAGAAATCAAAACGAACCGAGAGACTCGATCGAAAGTGCATTTATTATGATTAAGCAATAGGC 14 9557513 0.979985702 6 10 72 0.857142857 1.255272505 0.380952381 0.428571429 0.619047619 14 3 0 18 3R:9557471-9557533 8 10.5 2341 FBgn0037709 100.1133333 7.073333333 10.93 0.104881135 1.484448633 0.960658737 -6 -6 -6 0.25 dme-miR-965-3p 7mer-m8 TACGCTT 3R 9575015 9575021 - 3R_9575015_9575021_- 0.61466686 0.61585576 0.61526131 0.000840679 Kap-alpha3 FBtr0301189|FBtr0082108|FBtr0082106|FBtr0082107 9574962|9574482|9574962|9574482 9575473|9575473|9575473|9575473 3R - 9574972 9575075 3'utr Kap-alpha3 FlyBase G49473.1 AGATTTCAAAAAGAATGTAGACCTATTTGATTTATATGAAATTATTTAAATATTTACGCTTCTGATTTGTAATTGAAATTACATATGTATACATTTCTAACATG 76 9575022 0.990178922 12 76 761 1 1.954242509 0.033333333 0.171052632 0.3 76 0 0 90 3R:9574972-9575075 7 Kap-alpha3 FBtr0082108|FBtr0301189|FBtr0082107|FBtr0082106 9574482|9574962|9574482|9574962 9575473|9575473|9575473|9575473 TACGCTT 7mer-m8 dme-miR-965-3p 3R - 9574992 9575070 3'utr Kap-alpha3 FlyBase G37387.1 TCAAAAAGAATGTAGACCTATTTGATTTATATGAAATTATTTAAATATTTACGCTTCTGATTTGTAATTGAAATTACAT 36 9575022 0.843972863 10 35 331 0.955555556 1.633468456 0.044444444 0.25 0.4 36 2 0 43 3R:9574992-9575070 7 47 2342 FBgn0027338 3256.33 173.6 265.9533333 0.014433427 0.270737327 0.176722733 1 1 1 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 3R 9575200 9575205 - 3R_9575200_9575205_- 0.442517514 0.458231002 0.450374258 0.011111122 Kap-alpha3 FBtr0301189|FBtr0082108|FBtr0082106|FBtr0082107 9574962|9574482|9574962|9574482 9575473|9575473|9575473|9575473 3R - 9575186 9575236 3'utr Kap-alpha3 FlyBase G49475.1 CCGCTGCAGCCGTTTTAGCTTCTCTCAATTCTGTGTTAACAAAATTACAAA 45 9575208 0.750132505 4 41 459 0.92 1.662757832 0.08 0.111111111 0.2 45 4 0 46 3R:9575186-9575236 6 Kap-alpha3 FBtr0082108|FBtr0301189|FBtr0082107|FBtr0082106 9574482|9574962|9574482|9574962 9575473|9575473|9575473|9575473 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 9575185 9575228 3'utr Kap-alpha3 FlyBase G37389.1 GCCGTTTTAGCTTCTCTCAATTCTGTGTTAACAAAATTACAAAA 23 9575208 0.770431835 5 22 235 0.965517241 1.447158031 0.172413793 0.260869565 0.413793103 23 1 0 28 3R:9575185-9575228 6 33 2343 FBgn0027338 3256.33 173.6 265.9533333 0.010134108 0.190092166 0.124081919 3 3 3 0.25 dme-miR-11-3p 7mer-m1 TGTGATG 3R 9589304 9589310 + 3R_9589304_9589310_+ 0.589698969 0.611619813 0.600659391 0.015500346 P58IPK FBtr0082074 9589281 9589581 3R + 9589238 9589339 stop_codon P58IPK FlyBase G41500.1 TTCCAACACGGGTCGCCGTTCCAGTTCAAGTTCCACTTCAATTAGTCAGCCAGCAGCCATTTGCTTTGTGATGTCCTAGCCGCGATCCCCGATATCCTTTAA 31 9589303 0.984221303 14 29 226 0.942857143 1.51851394 0.114285714 0.129032258 0.228571429 31 2 0 33 3R:9589238-9589339 7 P58IPK FBtr0082074 9589281 9589581 TGTGATG 7mer-m1 dme-miR-11-3p 3R + 9589277 9589328 stop_codon P58IPK FlyBase G31308.1 AATTAGTCAGCCAGCAGCCATTTGCTTTGTGATGTCCTAGCCGCGATCCCCG 15 9589303 0.666256852 5 12 99 0.92 1.06069784 0.24 0.466666667 0.68 15 1 1 23 3R:9589277-9589328 7 17.5 2344 FBgn0037718 1190.153333 64.61333333 98.40666667 0.014703988 0.270841931 0.17783348 1 1 1 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 3R 9684601 9684606 - 3R_9684601_9684606_- 0.98174067 0.99923285 0.99048676 0.012368853 eca FBtr0082098 9684467 9684666 3R - 9684503 9684635 3'utr eca FlyBase G49523.1 ACTGGCCAACCACTGGCCTCATTGTTCCGTGTGTTTCCCTCATTTGGCAGGAATTGCGAATTTCATCGATGGATCGTCATCCACCCAACCAGCCACTGGCCTCGACTCCAAGCACTTCTAGTTGTAATTTCTT 64 9684612 0.882363629 22 60 474 0.902777778 1.812913357 0.111111111 0.125 0.222222222 64 7 0 65 3R:9684503-9684635 6 eca FBtr0082098 9684467 9684666 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 9684581 9684633 3'utr eca FlyBase G37442.1 TGGCCAACCACTGGCCTCATTGTTCCGTGTGTTTCCCTCATTTGGCAGGAATT 21 9684611 0.777805302 9 20 178 0.966666667 1.462397998 0.166666667 0.380952381 0.566666667 21 1 0 29 3R:9684581-9684633 6 27.5 2345 FBgn0069242 341.4133333 44.61 67.42 0.080547528 0.61645371 0.407890834 6 5 5.5 0.25 dme-miR-92b-3p 8mer-A1 GTGCAATA 3R 9686731 9686738 + 3R_9686731_9686738_+ 0.621493333 0.614738194 0.618115763 0.004776577 CG18542 FBtr0082084 9686716 9687141 3R + 9686685 9686757 stop_codon CG18542 FlyBase G41532.1 ACCGACGGAGCAGCTTTGCACAAGCAAAACTAGTGCGTTACCAATGGTGCAATATAGATGATAGATAAATGGA 47 9686729 0.978039317 6 46 295 0.981132075 1.716003344 0.094339623 0.127659574 0.226415094 47 1 0 52 3R:9686685-9686757 8 CG18542 FBtr0082084 9686716 9687141 GTGCAATA 8mer-A1 dme-miR-92b-3p 3R + 9686716 9686771 stop_codon CG18542 FlyBase G31333.1 AGTGCGTTACCAATGGTGCAATATAGATGATAGATAAATGGATTCTGTGGAATCTT 16 9686729 0.976444182 2 16 112 1 1.447158031 0.178571429 0.4375 0.678571429 16 0 0 28 3R:9686716-9686771 8 29 2346 FBgn0037731 342.2866667 33.38666667 51.05666667 0.084724305 0.868610224 0.567996344 2 2 2 0.25 dme-miR-190-5p 6mer3-8 ACATAT 3R 9686816 9686821 + 3R_9686816_9686821_+ 0.994345694 0.936679327 0.965512511 0.040776302 CG18542 FBtr0082084 9686716 9687141 3R + 9686779 9686850 3'utr CG18542 FlyBase G41533.1 ATTTACGTATTTATTCTGTGAACTTTACATTCCAGTCACATATTGCGTCCCGAACTCAAATCACACCGAATT 84 9686808 0.797150919 13 82 510 0.981981982 1.736396502 0 0.238095238 0.423423423 84 1 1 109 3R:9686779-9686850 6 CG18542 FBtr0082084 9686716 9687141 ACATAT 6mer3-8 dme-miR-190-5p 3R + 9686784 9686842 3'utr CG18542 FlyBase G31334.1 CGTATTTATTCTGTGAACTTTACATTCCAGTCACATATTGCGTCCCGAACTCAAATCAC 54 9686808 0.76140962 8 51 343 0.974358974 1.880813592 0 0.333333333 0.538461538 54 2 0 76 3R:9686784-9686842 6 63.5 2347 FBgn0037731 342.2866667 33.38666667 51.05666667 0.185517013 1.901956869 1.243716132 8 8 8 0.25 dme-miR-190-5p 6mer3-8 ACATAT 3R 9694136 9694141 + 3R_9694136_9694141_+ 0.999768766 0.999510637 0.999639701 0.000182575 CG32939 FBtr0082085 9694036 9694461 3R + 9694100 9694204 3'utr CG32939 FlyBase G41538.1 TTTACGTATTTATTCTGTGAACTTTACATTCCAGTCACATATTGCGTCCCGAACTCAAATCACACCGAATTATGCCCTTGATGGCGTTTCTTTATCGATTCGACA 87 9694128 0.979524128 7 78 548 0.887850467 1.977723605 0 0.172413793 0.327102804 87 12 0 95 3R:9694100-9694204 6 CG32939 FBtr0082085 9694036 9694461 ACATAT 6mer3-8 dme-miR-190-5p 3R + 9694114 9694159 3'utr CG32939 FlyBase G31337.1 CTGTGAACTTTACATTCCAGTCACATATTGCGTCCCGAACTCAAAT 64 9694128 0.731084878 6 54 370 0.901098901 1.612783857 0 0.3125 0.516483516 64 8 1 82 3R:9694114-9694159 6 71.5 2348 FBgn0052939 2.536666667 0.266666667 0.413333333 28.18659658 268.125 172.983871 8 8 8 0.25 dme-miR-184-5p 8mer-m1 TGATAAGG 3R 9714167 9714174 + 3R_9714167_9714174_+ 0.540473826 0.54732851 0.543901168 0.004847005 dmt FBtr0082086 9714126 9714675 3R + 9714155 9714186 3'utr dmt FlyBase G41554.1 TTTTTGTGTCGCTGATAAGGGGAAGTAGTCGT 5 9714169 0.819876762 3 5 31 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 3R:9714155-9714186 8 dmt FBtr0082086 9714126 9714675 TGATAAGG 8mer-m1 dme-miR-184-5p 3R + 9714156 9714201 3'utr dmt FlyBase G31351.1 TTTTGTGTCGCTGATAAGGGGAAGTAGTCGTTTTTAATTTAATGTG 9 9714180 0.796017454 5 9 71 1 1.113943352 0.307692308 0.333333333 0.538461538 9 0 0 13 3R:9714156-9714201 8 6.5 2349 FBgn0016792 1049.153333 39.87 61.16 0.006195472 0.163029847 0.106278613 -2 -13 -7.5 0.25 dme-miR-1008-3p 6mer2-7 GCTGTG 3R 9742021 9742026 + 3R_9742021_9742026_+ 0.902368238 0.985769157 0.944068697 0.058973413 Pnn FBtr0082126 9741975 9742156 3R + 9741993 9742051 3'utr Pnn FlyBase G41561.1 GGGCTTGAAATATGATCGTGCGGATATCGCTGTGTAGGGCAATTGGGTTTCAATTTATA 11 9742023 0.980493779 6 10 70 0.933333333 1.146128036 0.266666667 0.272727273 0.466666667 11 1 0 14 3R:9741993-9742051 6 Pnn FBtr0082126 9741975 9742156 GCTGTG 6mer2-7 dme-miR-1008-3p 3R + 9741982 9742040 3'utr Pnn FlyBase G31358.1 AGTTTGCACTAGGGCTTGAAATATGATCGTGCGGATATCGCTGTGTAGGGCAATTGGGT 17 9742027 0.963697146 7 17 94 1 1.397940009 0.2 0.352941176 0.56 17 0 0 25 3R:9741982-9742040 6 9.5 2350 FBgn0037737 459.6666667 41.47666667 63.47666667 0.02066715 0.229044443 0.149661293 -2 -6 -4 0.25 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3R 9754786 9754792 - 3R_9754786_9754792_- 0.597215381 0.519618657 0.558417019 0.054869153 Rpt3R FBtr0332172|FBtr0301536 9754733|9754733 9754897|9754897 3R - 9754770 9754813 3'utr Rpt3R FlyBase G49636.1 TCGAAATATATTAGTCAATACTGGTGCTTTAAATAAAAGAAAAT 11 9754785 0.850362932 4 11 87 1 1.079181246 0 0.090909091 0.166666667 11 0 0 12 3R:9754770-9754813 7 Rpt3R FBtr0301536|FBtr0332172 9754733|9754733 9754897|9754897 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3R - 9754771 9754802 3'utr Rpt3R FlyBase G37533.1 TAGTCAATACTGGTGCTTTAAATAAAAGAAAA 11 9754785 0.70010988 4 11 78 1 1.230448921 0.117647059 0.454545455 0.647058824 11 0 0 17 3R:9754771-9754802 7 11 2351 FBgn0037742 43.66666667 3.773333333 5.77 0.251908397 2.915194346 1.906412478 -7 -7 -7 0.25 dme-miR-305-5p 7mer-A1 GTACAAA 3R 9761834 9761840 - 3R_9761834_9761840_- 0.782722707 0.543326935 0.663024821 0.169278394 Snap24 FBtr0082163 9761303 9762210 3R - 9761810 9761858 3'utr Snap24 FlyBase G49643.1 TACTATTACTACACTCGTGTACAAATGGCAACCAGATGGCGCCGGAAAC 26 9761833 0.948163519 6 23 100 0.918918919 1.230448921 0 0.32 0.540540541 25 2 1 34 3R:9761810-9761858 7 Snap24 FBtr0082163 9761303 9762210 GTACAAA 7mer-A1 dme-miR-305-5p 3R - 9761811 9761852 3'utr Snap24 FlyBase G37539.1 TACTACACTCGTGTACAAATGGCAACCAGATGGCGCCGGAAA 19 9761833 0.931244553 4 17 69 0.793103448 1.361727836 0 0.315789474 0.551724138 19 6 0 23 3R:9761811-9761852 7 20.5 2352 FBgn0266720 491.6633333 32.04666667 48.65666667 0.041695198 0.639692116 0.421319449 -7 -7 -7 0.25 dme-miR-1008-3p 7mer-m8 AGCTGTG 3R 9765892 9765898 + 3R_9765892_9765898_+ 0.630474551 0.663511303 0.646992927 0.023360475 CG8478 FBtr0301870|FBtr0301871|FBtr0332171|FBtr0082133 9765837|9765837|9765837|9765837 9766135|9766135|9766135|9766135 3R + 9765843 9765916 3'utr CG8478 FlyBase G41599.1 AGCGATTCGTGTGTAGCCTAGTCTATGTCTAAGTTAAGTGCTGTGGCGTAGCTGTGGTCCGGTAACGGCGCGTT 15 9765884 0.928174759 9 11 112 0.611111111 0.740362689 0.222222222 0.133333333 0.277777778 15 6 1 11 3R:9765843-9765916 7 CG8478 FBtr0332171|FBtr0082133|FBtr0301870|FBtr0301871 9765837|9765837|9765837|9765837 9766135|9766135|9766135|9766135 AGCTGTG 7mer-m8 dme-miR-1008-3p 3R + 9765873 9765912 3'utr CG8478 FlyBase G31382.1 AAGTTAAGTGCTGTGGCGTAGCTGTGGTCCGGTAACGGCG 9 9765885 0.581625969 6 9 60 1 1.146128036 0.285714286 0.444444444 0.642857143 9 0 0 14 3R:9765873-9765912 7 8.5 2353 FBgn0037746 785.14 44.18333333 67.65666667 0.010826095 0.192380234 0.12563433 8 7 7.5 0.25 dme-miR-1006-3p 6mer2-7 GAATTT 3R 9766043 9766048 + 3R_9766043_9766048_+ 0.999997844 0.999999862 0.999998853 1.48E-06 CG8478 FBtr0301870|FBtr0301871|FBtr0332171|FBtr0082133 9765837|9765837|9765837|9765837 9766135|9766135|9766135|9766135 3R + 9766007 9766075 3'utr CG8478 FlyBase G41600.1 ATTGTACACTTCAGCTGCACGACTGGACTGCTTTGTGAATTTTTTAGGTTTTCGTATGACATTCACACA 25 9766046 0.790926277 10 24 204 0.962962963 1.414973348 0.111111111 0.08 0.148148148 25 1 0 26 3R:9766007-9766075 6 CG8478 FBtr0332171|FBtr0082133|FBtr0301870|FBtr0301871 9765837|9765837|9765837|9765837 9766135|9766135|9766135|9766135 GAATTT 6mer2-7 dme-miR-1006-3p 3R + 9765987 9766062 3'utr CG8478 FlyBase G31383.1 GGTTACTCGAATGCTTATTAATTGTACACTTCAGCTGCACGACTGGACTGCTTTGTGAATTTTTTAGGTTTTCGTA 16 9766038 0.98730842 8 15 143 1 1.380211242 0.208333333 0.375 0.583333333 16 0 0 24 3R:9765987-9766062 6 11 2354 FBgn0037746 785.14 44.18333333 67.65666667 0.01401024 0.248962656 0.162585604 -3 5 1 0.25 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 9766376 9766382 - 3R_9766376_9766382_- 0.652826183 0.653048227 0.652937205 0.000156978 MED6 FBtr0301873|FBtr0339719|FBtr0082161|FBtr0082162|FBtr0301872 9766029|9766029|9766029|9766029|9766029 9766440|9766440|9766440|9766440|9766440 3R - 9766349 9766399 3'utr MED6 FlyBase G49653.1 ATTAGTCCGAGTCCTTTGGCAGCTGCATAAAAGGCGCTGAATGCTGCCTGC 41 9766383 0.974589705 4 40 246 0.97826087 1.653212514 0.239130435 0.12195122 0.217391304 41 1 0 45 3R:9766349-9766399 7 MED6 FBtr0339719|FBtr0082161|FBtr0082162|FBtr0301872|FBtr0301873 9766029|9766029|9766029|9766029|9766029 9766440|9766440|9766440|9766440|9766440 GGCAGCT 7mer-m8 dme-miR-980-3p 3R - 9766345 9766399 3'utr MED6 FlyBase G37544.1 ATTAGTCCGAGTCCTTTGGCAGCTGCATAAAAGGCGCTGAATGCTGCCTGCATTT 37 9766384 0.972933767 5 36 218 0.981132075 1.716003344 0.188679245 0.324324324 0.528301887 37 1 0 52 3R:9766345-9766399 7 38 2355 FBgn0024330 320.2133333 23.55 36.04333333 0.118670886 1.61358811 1.054286507 1 2 1.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3R 9769498 9769504 + 3R_9769498_9769504_+ 0.554919924 0.796830866 0.675875395 0.171056909 CG8481 FBtr0100583|FBtr0082134 9769425|9769425 9770027|9770027 3R + 9769431 9769619 3'utr CG8481 FlyBase G41603.1 CAACGCCAGTAGTAGTGGGCTTGGCTAAATTGGGCCATACCCAGCCCGATCAGAGAGTGGCAGTGAACTAGTCAAATTGGCAAATGCTTGAAATTCTTTACGGGTTTTACCTGCCAGCAGCTGCTTCGAGCCATAACCTGTGGATGCCAGGCAGTCTGCCAAGTGCATGTGTGATTGCCTCGTTGCTCT 113 9769489 0.964284717 22 102 534 0.929078014 1.8162413 0.120567376 0.203539823 0.361702128 113 9 1 131 3R:9769431-9769619 7 CG8481 FBtr0100583|FBtr0082134 9769425|9769425 9770027|9770027 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 9769429 9769559 3'utr CG8481 FlyBase G31387.1 GTCAACGCCAGTAGTAGTGGGCTTGGCTAAATTGGGCCATACCCAGCCCGATCAGAGAGTGGCAGTGAACTAGTCAAATTGGCAAATGCTTGAAATTCTTTACGGGTTTTACCTGCCAGCAGCTGCTTCGA 113 9769490 0.959591984 13 107 496 0.95212766 2.252853031 0.138297872 0.451327434 0.670212766 113 9 0 179 3R:9769429-9769559 7 93 2356 FBgn0037747 197.4366667 16.77 25.65666667 0.471037126 5.545617174 3.624788879 9 8 8.5 0.25 dme-miR-33-5p 6mer2-7 AATGCA 3R 9778827 9778832 + 3R_9778827_9778832_+ 0.538165237 0.520321634 0.529243436 0.012617331 RpS29 FBtr0334681 9778784 9779528 3R + 9778786 9778896 3'utr RpS29 FlyBase G41610.1 ATGTGTCCTCTTCGCATTTTAACGCGGTAATCGCGTATATTAATGCATATTAATGTATGGAGTCGTCGGATGTCGGGGACTCGGTAAATTAGTATGCCGGCAGCAACAGCA 39 9778829 0.862691846 18 31 248 0.825 1.217483944 0.45 0.052631579 0.1 38 6 1 33 3R:9778786-9778896 6 RpS29 FBtr0334681|FBtr0082136 9778784|9778784 9779528|9779078 AATGCA 6mer2-7 dme-miR-33-5p 3R + 9778787 9778928 3'utr RpS29 FlyBase G31395.1 TGTGTCCTCTTCGCATTTTAACGCGGTAATCGCGTATATTAATGCATATTAATGTATGGAGTCGTCGGATGTCGGGGACTCGGTAAATTAGTATGCCGGCAGCAACAGCAACAACAATAATCATTTGGGGATTTAAGCAAGG 35 9778829 0.954124137 19 31 255 0.88 1.643452676 0.38 0.257142857 0.48 35 6 0 44 3R:9778787-9778928 6 10 2357 FBgn0261599 23525.90667 6343.63 9678.496667 0.000425063 0.001576384 0.001033218 -2 -2 -2 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 9779385 9779391 + 3R_9779385_9779391_+ 0.748147541 0.740664809 0.744406175 0.005291068 RpS29 FBtr0334681|FBtr0334681|FBtr0334681 9778784|9778784|9778784 9779528|9779528|9779528 3R + 9779349 9779428 3'utr RpS29 FlyBase G41613.1 CACCAGTTGCATAAAGGCTTTTGATGCGGACTTTGATGTGATATGCAAAACTGGCAGGCCACTGAACCCATTTTTTATAT 31 9779369 0.979946844 11 31 217 1 1.544068044 0.257142857 0.129032258 0.228571429 31 0 0 35 3R:9779349-9779428 7 RpS29 FBtr0334681|FBtr0334681|FBtr0334681 9778784|9778784|9778784 9779528|9779528|9779528 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 9779353 9779398 3'utr RpS29 FlyBase G31401.1 AGTTGCATAAAGGCTTTTGATGCGGACTTTGATGTGATATGCAAAA 21 9779382 0.937852622 9 20 150 0.911764706 1.491361694 0.088235294 0.333333333 0.588235294 21 3 0 31 3R:9779353-9779398 7 17 2358 FBgn0261599 23525.90667 6343.63 9678.496667 0.000722608 0.002679854 0.001756471 16 3 9.5 0.25 dme-miR-282-5p 6mer3-8 AGAGGC 3R 9783827 9783832 - 3R_9783827_9783832_- 0.523220493 0.964248489 0.743734491 0.311853889 MtnA FBtr0334686 9783405 9783858 3R - 9783774 9783861 stop_codon MtnA FlyBase G49663.1 TGAGCTTTCCCCCAAAAAAGATCTGGAGTAGAGGCGCTGCATCTTGTCTCTCTACACACCCTGCAATAAATGTCCAATTAAAGTAATT 39 9783855 0.723290385 11 35 225 0.875 1.62324929 0.208333333 0.179487179 0.333333333 39 6 0 42 3R:9783774-9783861 6 MtnA FBtr0334686 9783405 9783858 AGAGGC 6mer3-8 dme-miR-282-5p 3R - 9783776 9783885 stop_codon MtnA FlyBase G37551.1 AAATCCGCCTGCGGCTGCTCCGAGTGAGCTTTCCCCCAAAAAAGATCTGGAGTAGAGGCGCTGCATCTTGTCTCTCTACACACCCTGCAATAAATGTCCAATTAAAGTAA 38 9783834 0.919425703 15 37 194 0.979166667 1.672097858 0.1875 0.263157895 0.416666667 38 1 0 47 3R:9783776-9783885 6 21 2359 FBgn0002868 684.99 284.0066667 426.33 0.030657382 0.073941926 0.049257617 23 2 12.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3R 9787236 9787242 + 3R_9787236_9787242_+ 0.643829356 0.642028032 0.642928694 0.001273782 CG8500 FBtr0082139 9786856 9789323 3R + 9787207 9787272 3'utr CG8500 FlyBase G41620.1 ATATATTCTATTCGAGCCGATCAGATCTTTCTAGTCGCACAGAGACACGATACCACGTACTGCATA 187 9787235 0.756873768 10 185 1090 0.990950226 2.340444115 0.366515837 0.14973262 0.280542986 187 2 0 219 3R:9787207-9787272 7 CG8500 FBtr0082139 9786856 9789323 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 9787202 9787269 3'utr CG8500 FlyBase G31410.1 AGGTTATATATTCTATTCGAGCCGATCAGATCTTTCTAGTCGCACAGAGACACGATACCACGTACTGC 126 9787235 0.677542435 6 118 728 0.91959799 1.961421094 0.361809045 0.388888889 0.613065327 126 15 1 183 3R:9787202-9787269 7 147 2360 FBgn0037754 1099.76 38.82 59.79333333 0.133665527 3.786707883 2.458468057 1 1 1 0.25 dme-miR-980-3p 6mer2-7 GCAGCT 3R 9787871 9787876 + 3R_9787871_9787876_+ 0.999445279 0.952441727 0.975943503 0.033236564 CG8500 FBtr0082139 9786856 9789323 3R + 9787827 9787905 3'utr CG8500 FlyBase G41624.1 AATATGTATGTACAATTTTACACTTATTTGCTGAACTTTATTGAGCAGCTTGAACTTTCTCAGTAGTAGCCAGATCGAT 15 9787867 0.98823545 8 14 120 0.882352941 1.176091259 0.235294118 0.133333333 0.235294118 15 2 0 15 3R:9787827-9787905 6 CG8500 FBtr0082139 9786856 9789323 GCAGCT 6mer2-7 dme-miR-980-3p 3R + 9787852 9787882 3'utr CG8500 FlyBase G31415.1 ATTTGCTGAACTTTATTGAGCAGCTTGAACT 8 9787867 0.770603678 4 8 60 1 1.079181246 0 0.375 0.583333333 8 0 0 12 3R:9787852-9787882 6 9.5 2361 FBgn0037754 1099.76 38.82 59.79333333 0.008638248 0.244719217 0.158880589 4 4 4 0.25 dme-miR-283-5p 8mer-A1 TGATATTA 3R 9788236 9788243 + 3R_9788236_9788243_+ 0.591735807 0.58632959 0.589032699 0.003822761 CG8500 FBtr0082139 9786856 9789323 3R + 9788207 9788337 3'utr CG8500 FlyBase G41626.1 CAAATTGTTTCGCATAGTTTGCTGTTGTTTGATATTAAGAGGATAAGTTTTTTTAAATTTTACCAATCGGACTAAGTGAATGATATGCTTTAAACGCTGCTATACCAATTAGCCAAATAGAGGGGCATGTA 19 9788234 0.991101359 15 19 193 1 1.322219295 0.380952381 0.105263158 0.19047619 19 0 0 21 3R:9788207-9788337 8 CG8500 FBtr0082139 9786856 9789323 TGATATTA 8mer-A1 dme-miR-283-5p 3R + 9788216 9788248 3'utr CG8500 FlyBase G31416.1 TCGCATAGTTTGCTGTTGTTTGATATTAAGAGG 7 9788234 0.637901778 5 7 69 1 0.954242509 0.555555556 0.285714286 0.444444444 7 0 0 9 3R:9788216-9788248 8 9 2362 FBgn0037754 1099.76 38.82 59.79333333 0.008183604 0.231839258 0.150518452 2 2 2 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 9789276 9789283 - 3R_9789276_9789283_- 0.499531095 0.499284145 0.49940762 0.000174655 CG12945 FBtr0113214|FBtr0334685 9788850|9788850 9789429|9789429 3R - 9789239 9789309 3'utr CG12945 FlyBase G49669.1 AAATTTTTATTTAAATTATTTTGCATGTACTTAATCTCATTTGCGCGATAAGTGTTATTAAGATAAATCTT 133 9789284 0.743506749 15 127 1299 0.968152866 2.181843588 0.038216561 0.135338346 0.267515924 133 5 0 152 3R:9789239-9789309 8 CG12945 FBtr0334685|FBtr0113214 9788850|9788850 9789429|9789429 GTACTTAA 8mer-A1 dme-miR-252-5p 3R - 9789241 9789307 3'utr CG12945 FlyBase G37556.2 ATTTTTATTTAAATTATTTTGCATGTACTTAATCTCATTTGCGCGATAAGTGTTATTAAGATAAATC 85 9789284 0.738066613 12 82 763 0.9609375 1.788875116 0.09375 0.364705882 0.578125 85 4 1 123 3R:9789241-9789307 8 100 2363 FBgn0037755 425.2633333 24.99 38.05666667 0.235148418 4.00160064 2.627660506 1 1 1 0.25 dme-miR-305-5p 7mer-A1 GTACAAA 3R 9797271 9797277 + 3R_9797271_9797277_+ 0.643689004 0.618971439 0.631330221 0.017477983 CG8516 FBtr0082141 9797002 9797754 3R + 9797239 9797339 3'utr CG8516 FlyBase G41640.1 TAGAATATAGCATAGCTTTAGGTTGAATTTGTGTACAAACTATTTGTATGAACGGCTCGACAATTGCTTCCGGGCGAGGGTGGGTAATCGCTCCAAGTATC 72 9797267 0.783196837 10 69 642 0.989010989 1.954242509 0.197802198 0.236111111 0.395604396 72 1 0 90 3R:9797239-9797339 7 CG8516 FBtr0082141 9797002 9797754 GTACAAA 7mer-A1 dme-miR-305-5p 3R + 9797231 9797326 3'utr CG8516 FlyBase G31430.1 TTGCCCTTTAGAATATAGCATAGCTTTAGGTTGAATTTGTGTACAAACTATTTGTATGAACGGCTCGACAATTGCTTCCGGGCGAGGGTGGGTAAT 45 9797267 0.794954015 9 40 361 0.942028986 1.812913357 0.202898551 0.4 0.608695652 45 4 0 65 3R:9797231-9797326 7 42 2364 FBgn0037757 595.6666667 20.49666667 31.43 0.070509233 2.049113677 1.336302895 4 4 4 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 3R 9797915 9797921 - 3R_9797915_9797921_- 0.520973053 0.367146812 0.444059932 0.10877162 CG9467 FBtr0082156 9797767 9798459 3R - 9797867 9797963 3'utr CG9467 FlyBase G49680.1 AAACAGCCAATCAGTTGATTGTCAACCTTGAAGATGATTACTTGTGATTAAAATCGATAGAGCGACTGCTTCAAATTCGAATCTGTCCTGTTGCATG 62 9797923 0.762414697 20 60 494 0.961038961 1.568201724 0.051948052 0.209677419 0.363636364 62 2 1 74 3R:9797867-9797963 7 CG9467 FBtr0082156 9797767 9798459 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 9797909 9797962 3'utr CG9467 FlyBase G37561.2 AACAGCCAATCAGTTGATTGTCAACCTTGAAGATGATTACTTGTGATTAAAATC 18 9797926 0.656996925 9 17 130 0.925925926 1.397940009 0.037037037 0.277777778 0.518518519 18 2 0 25 3R:9797909-9797962 7 25.5 2365 FBgn0037758 388.19 14.69 22.38 0.065689482 1.735874745 1.139410188 2 5 3.5 0.25 dme-miR-14-3p 6mer3-8 AAGACT 3R 9798079 9798084 - 3R_9798079_9798084_- 0.996726265 0.759741375 0.87823382 0.16757363 CG9467 FBtr0082156 9797767 9798459 3R - 9797968 9798105 3'utr CG9467 FlyBase G49681.1 AAACCATGTAAACCAGAGTATAAGACTTCTGCAACCGATCATCTATAATTAGCACAACTCTCCTAAAGGGTGCTCCATCAGGACAGATACGAAATCGTTCGGCTTGGATAAGATTGGTTGCCTTAAGCAAAGAAAGTT 120 9798076 0.962533558 12 111 621 0.921428571 1.633468456 0.042857143 0.125 0.25 120 9 2 129 3R:9797968-9798105 6 CG9467 FBtr0082156 9797767 9798459 AAGACT 6mer3-8 dme-miR-14-3p 3R - 9798059 9798104 3'utr CG9467 FlyBase G37563.1 AACCATGTAAACCAGAGTATAAGACTTCTGCAACCGATCATCTATA 70 9798076 0.72754091 5 61 349 0.857142857 1.62324929 0.091836735 0.285714286 0.489795918 70 13 1 84 3R:9798059-9798104 6 89 2366 FBgn0037758 388.19 14.69 22.38 0.229269172 6.058543227 3.976764969 -8 -8 -8 0.25 dme-miR-305-3p 6mer3-8 ATGTGC 3R 9798239 9798244 - 3R_9798239_9798244_- 0.99334406 0.753053794 0.873198927 0.169910901 CG9467 FBtr0082156 9797767 9798459 3R - 9798202 9798300 3'utr CG9467 FlyBase G49683.1 ACTGGGCCGTGATGAACTGCCAGCAGGCATTTACCCAATCAATTAATCTCCATTATATGTGCTCGATGTGTTTGCAAATGCAATGTGTATCCCGTAAAC 25 9798243 0.980188227 11 25 207 1 1.447158031 0.107142857 0.12 0.214285714 25 0 0 28 3R:9798202-9798300 6 CG9467 FBtr0082156 9797767 9798459 ATGTGC 6mer3-8 dme-miR-305-3p 3R - 9798151 9798301 3'utr CG9467 FlyBase G37564.1 CACTGGGCCGTGATGAACTGCCAGCAGGCATTTACCCAATCAATTAATCTCCATTATATGTGCTCGATGTGTTTGCAAATGCAATGTGTATCCCGTAAACCCATTTTTTGTGCTCCTCCAAACTTGGATCGTACAGTTAGTAATTTAAAAA 32 9798243 0.990393691 14 23 224 0.673469388 1.041392685 0.040816327 0.375 0.591836735 32 14 2 33 3R:9798151-9798301 6 14.5 2367 FBgn0037758 388.19 14.69 22.38 0.037352843 0.987066031 0.647899911 -1 -1 -1 0.25 dme-miR-980-3p 6mer3-8 GGCAGC 3R 9804268 9804273 - 3R_9804268_9804273_- 0.741709098 0.901756481 0.821732789 0.113170602 FBXO11 FBtr0334684 9803484 9804888 3R - 9804260 9804338 3'utr FBXO11 FlyBase G49702.1 CCCCCTCCTGACTAACAACAATTCGAAGAAAGCAATTCTAAGTATTAACAACAAACTAGATTAGCGGCAGCCAATGCTT 15 9804302 0.966433388 7 13 69 0.875 0.84509804 0.0625 0.066666667 0.125 15 1 1 14 3R:9804260-9804338 6 FBXO11 FBtr0334684 9803484 9804888 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 9804254 9804315 3'utr FBXO11 FlyBase G37573.1 CGAAGAAAGCAATTCTAAGTATTAACAACAAACTAGATTAGCGGCAGCCAATGCTTCAGCAA 7 9804277 0.978236431 5 5 27 0.833333333 1 0 0.571428571 0.75 7 2 0 10 3R:9804254-9804315 6 6.5 2368 FBgn0037760 1562.243333 36.55333333 56.13333333 0.004160683 0.17782236 0.115795724 29 4 16.5 0.25 dme-miR-33-5p 8mer-A1 CAATGCAA 3R 9804607 9804614 - 3R_9804607_9804614_- 0.508423145 0.497651168 0.503037157 0.007616884 FBXO11 FBtr0334684 9803484 9804888 3R - 9804579 9804638 3'utr FBXO11 FlyBase G49705.1 TAACTGAGTATGTTACGGATAAATCAATGCAAAAACCACTGAAACTTTTCCCATTTATGT 80 9804615 0.791856305 4 78 257 0.980392157 2 0.274509804 0.2375 0.401960784 80 2 0 100 3R:9804579-9804638 8 FBXO11 FBtr0334684 9803484 9804888 CAATGCAA 8mer-A1 dme-miR-33-5p 3R - 9804601 9804633 3'utr FBXO11 FlyBase G37575.1 GAGTATGTTACGGATAAATCAATGCAAAAACCA 57 9804615 0.769030334 2 53 154 0.964285714 1.908485019 0.321428571 0.385964912 0.583333333 57 3 0 81 3R:9804601-9804633 8 66 2369 FBgn0037760 1562.243333 36.55333333 56.13333333 0.04224694 1.805580886 1.175771971 1 1 1 0.25 dme-miR-980-3p 8mer-A1 GGCAGCTA 3R 9804869 9804876 - 3R_9804869_9804876_- 0.466509934 0.654019525 0.560264729 0.13258931 FBXO11 FBtr0334684 9803484 9804888 3R - 9804788 9804910 stop_codon FBXO11 FlyBase G49707.1 ACACACACTGATGGTCAACTAGAGAACCCCCAACGGCAGCTAATCCACTATAGATATATCTTAAGTCGTTAAGGCCAATCTCTCAAATCTCTCGCACATCTCACGCGTTGCTGTAAATATTCA 43 9804868 0.768361185 17 38 185 0.901960784 1.361727836 0.215686275 0.162790698 0.294117647 43 4 1 46 3R:9804788-9804910 8 FBXO11 FBtr0334684 9803484 9804888 GGCAGCTA 8mer-A1 dme-miR-980-3p 3R - 9804788 9805011 stop_codon FBXO11 FlyBase G37577.1 TGCGACTGCGGTGCTGGCACCCTGTCCAATCAGTGTCAACTGCAGGGCGAACCCACTCAGGACACGGACACACTCTACGACTCGGCAGCCCCCATGGAATCACACACACTGATGGTCAACTAGAGAACCCCCAACGGCAGCTAATCCACTATAGATATATCTTAAGTCGTTAAGGCCAATCTCTCAAATCTCTCGCACATCTCACGCGTTGCTGTAAATATTCA 37 9804867 0.957714453 19 30 146 0.771929825 1.643452676 0.298245614 0.459459459 0.649122807 37 13 0 44 3R:9804788-9805011 8 18 2370 FBgn0037760 1562.243333 36.55333333 56.13333333 0.011521893 0.492431151 0.320665083 -8 -9 -8.5 0.25 dme-miR-283-5p 7mer-m1 GATATTT 3R 9983484 9983490 - 3R_9983484_9983490_- 0.677890779 0.431408767 0.554649773 0.174289094 Art4 FBtr0082150|FBtr0333687 9983184|9982814 9983912|9983912 3R - 9983395 9983507 3'utr Art4 FlyBase G49732.1 ATGTGAATTGTAATACCGATATTTAGCCCGCACGGGACTGCGCTTCAGGAAGTTTATTAGTTAATATGCCGATTGCCAATTGCAGATTTTGCCGTAAGCTTTGAACAAACCAA 14 9983497 0.981348367 10 12 88 0.894736842 1.230448921 0.210526316 0.285714286 0.473684211 14 2 0 17 3R:9983395-9983507 7 Art4 FBtr0082150|FBtr0333687 9983184|9982814 9983912|9983912 GATATTT 7mer-m1 dme-miR-283-5p 3R - 9983454 9983513 3'utr Art4 FlyBase G37592.1 TAACGTATGTGAATTGTAATACCGATATTTAGCCCGCACGGGACTGCGCTTCAGGAAGTT 9 9983498 0.975851168 7 9 53 1 1.079181246 0.416666667 0.222222222 0.416666667 9 0 0 12 3R:9983454-9983513 7 5 2371 FBgn0037770 662.43 26.1 40.01666667 0.007547967 0.191570881 0.124947938 7 8 7.5 0.25 dme-miR-1007-3p 8mer-A1 TGAGCTTA 3R 9990258 9990265 + 3R_9990258_9990265_+ 0.529643681 0.409025376 0.469334529 0.085290018 Glut4EF FBtr0333686|FBtr0305157 9987787|9987787 9995364|9995364 3R + 9990238 9990285 3'utr Glut4EF FlyBase G41665.1 AGGAGGAGCGGAGGGAAAATTGAGCTTAGGCGGCAGCAGCTTTAAAAA 11 9990257 0.918249382 4 11 37 1 1.041392685 0.272727273 0 0 11 0 0 11 3R:9990238-9990285 8 Glut4EF FBtr0333686|FBtr0305157 9987787|9987787 9995364|9995364 TGAGCTTA 8mer-A1 dme-miR-1007-3p 3R + 9990241 9990282 3'utr Glut4EF FlyBase G31446.1 AGGAGCGGAGGGAAAATTGAGCTTAGGCGGCAGCAGCTTTAA 7 9990257 0.922158899 4 7 21 1 1.079181246 0.416666667 0.571428571 0.75 7 0 0 12 3R:9990241-9990282 8 9 2372 FBgn0267336 810.6266667 20.61 31.68 0.011102522 0.436681223 0.284090909 1 1 1 0.25 dme-miR-1012-3p 6mer3-8 TTGACT 4 1034707 1034712 + 4_1034707_1034712_+ 0.973248748 0.975256635 0.974252691 0.0014198 ATPsyn-beta FBtr0344754 1034412 1034917 4 + 1034691 1034731 3'utr ATPsyn-beta FlyBase G56605.1 ACACTATGTTATCATTTTGACTGACTGTCGAAAATAAACCA 17 1034706 0.666028667 8 16 152 1 1.301029996 0.15 0.176470588 0.3 17 0 0 20 4:1034691-1034731 6 ATPsyn-beta FBtr0344754 1034412 1034917 TTGACT 6mer3-8 dme-miR-1012-3p 4 + 1034678 1034723 3'utr ATPsyn-beta FlyBase G42754.1 TATATTAAAAATTACACTATGTTATCATTTTGACTGACTGTCGAAA 14 1034707 0.987529492 5 14 129 1 1.230448921 0.411764706 0.214285714 0.352941176 14 0 0 17 4:1034678-1034723 6 15 2373 FBgn0010217 4002.656667 288.0533333 441.7933333 0.003747511 0.05207369 0.033952527 1 0 0.5 0.25 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 4 1035750 1035756 - 4_1035750_1035756_- 0.816173488 0.816732432 0.81645296 0.000395202 CaMKII FBtr0333673|FBtr0300378|FBtr0333674|FBtr0089218|FBtr0333675|FBtr0089219|FBtr0089217|FBtr0100146|FBtr0100148|FBtr0100147 1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286 1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277 4 - 1035744 1035786 3'utr CaMKII FlyBase G57302.1 ACTTAATCATTGTGAAATGATTATACATTTTACCTGATAGTAC 8 1035758 0.756657061 3 7 90 0.888888889 0.602059991 0 0.125 0.222222222 8 0 1 8 4:1035744-1035786 7 CaMKII FBtr0089217|FBtr0100146|FBtr0100148|FBtr0100147|FBtr0333675|FBtr0089219|FBtr0333674|FBtr0089218|FBtr0333673|FBtr0300378 1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286 1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 4 - 1035715 1035774 3'utr CaMKII FlyBase G43304.1 TGAAATGATTATACATTTTACCTGATAGTACATGTTAAAAAAAAACTTGGACTTAAACAC 11 1035758 0.858366592 4 10 74 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 4:1035715-1035774 7 6.5 2374 FBgn0264607 1116.67 52.21333333 80.09666667 0.005820878 0.124489275 0.081151941 2 2 2 0.25 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 4 108111 108118 + 4_108111_108118_+ 0.585226846 0.586246721 0.585736784 0.000721178 pan FBtr0308615 104412 110059 4 + 108033 108174 3'utr pan FlyBase G56193.1 TCCTATATTTGCATTGCCATCAATTGGTAATTGTAGTTTAAATATTTCTTCAATGCCAAACACATCCCGAAACCCTATTGGTGCTAACCCACGAGATATTAATAATCCCCTTAGCATCAATCAGCTGACTAAAAGACGTGAA 79 108110 0.957714487 11 78 379 0.989247312 1.963787827 0.086021505 0.151898734 0.279569892 79 1 0 92 4:108033-108174 8 pan FBtr0308615 104412 110059 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 4 + 108090 108131 3'utr pan FlyBase G42420.1 AAACACATCCCGAAACCCTATTGGTGCTAACCCACGAGATAT 33 108110 0.920295414 2 32 140 0.961538462 1.698970004 0.076923077 0.454545455 0.653846154 33 2 0 50 4:108090-108131 8 47.5 2375 FBgn0085432 3045.83 84.67333333 129.51 0.015595092 0.56097945 0.366767045 1 1 1 0.25 dme-miR-31a-5p 7mer-A1 CTTGCCA 4 108935 108941 + 4_108935_108941_+ 0.822006437 0.823345679 0.822676058 0.000947028 pan FBtr0309803|FBtr0100245|FBtr0308615|FBtr0089162|FBtr0112657|FBtr0089161 108491|108491|104412|108491|108491|108491 114270|109770|110059|110059|110059|110059 4 + 108877 108953 3'utr pan FlyBase G56198.1 TCTATTTATTTAGCTTAACACAACCAAATTATGTATTTTATTTTAAAATTAGACACAACTTGCCAAAATCCATTAAT 14 108914 0.98663349 9 13 118 0.928571429 1.113943352 0 0 0 14 1 0 13 4:108877-108953 7 pan FBtr0089161|FBtr0089162|FBtr0112657|FBtr0308615|FBtr0309803|FBtr0100245 108491|108491|108491|104412|108491|108491 110059|110059|110059|110059|114270|109770 CTTGCCA 7mer-A1 dme-miR-31a-5p 4 + 108896 108947 3'utr pan FlyBase G42426.1 ACAACCAAATTATGTATTTTATTTTAAAATTAGACACAACTTGCCAAAATCC 7 108905 0.933265951 5 6 51 1 1 0 0.285714286 0.5 7 0 0 10 4:108896-108947 7 4 2376 FBgn0085432 3045.83 84.67333333 129.51 0.001313271 0.047240375 0.030885646 21 30 25.5 0.25 dme-miR-190-5p 8mer-m1 ACATATCT 4 110236 110243 + 4_110236_110243_+ 0.51462659 0.34971211 0.43216935 0.116612161 pan FBtr0309803 108491 114270 4 + 110164 110279 3'utr pan FlyBase G56206.1 TTGTTTTTAATGTGTTAGTTATTTAAAATGCTTTAGGTTTAATTATCTCATATGTACACCGGTACTTAATATACATATCTTGATTTTCCGGAATGACAATCCTGTATATCCTATAA 22 110234 0.988908584 11 19 192 0.892857143 1.397940009 0.214285714 0.181818182 0.357142857 22 3 0 25 4:110164-110279 8 pan FBtr0309803 108491 114270 ACATATCT 8mer-m1 dme-miR-190-5p 4 + 110176 110263 3'utr pan FlyBase G42436.1 TGTTAGTTATTTAAAATGCTTTAGGTTTAATTATCTCATATGTACACCGGTACTTAATATACATATCTTGATTTTCCGGAATGACAAT 32 110233 0.980541349 15 30 323 0.9375 1.653212514 0.104166667 0.375 0.583333333 32 3 0 45 4:110176-110263 8 11 2377 FBgn0085432 3045.83 84.67333333 129.51 0.003611495 0.129911031 0.084935526 2 3 2.5 0.25 dme-miR-252-5p 6mer3-8 GTACTT 4 1115157 1115162 - 4_1115157_1115162_- 0.784042488 0.99051633 0.887279409 0.145999024 Cals FBtr0345193|FBtr0089208 1112872|1115077 1115826|1115826 4 - 1115137 1115231 3'utr Cals FlyBase G57337.1 AACTTAGATTAAGGAACATATCGAAGCTATAAAAAATTTATTTTCAACCGACCATAAACTTGTGAAATTGTACTTTTAAAATAGAATTTTTAATT 23 1115163 0.966308239 9 23 130 1 1.462397998 0.068965517 0.173913043 0.344827586 23 0 0 29 4:1115137-1115231 6 Cals FBtr0345193|FBtr0089208 1112872|1115077 1115826|1115826 GTACTT 6mer3-8 dme-miR-252-5p 4 - 1115152 1115183 3'utr Cals FlyBase G43324.1 CGACCATAAACTTGTGAAATTGTACTTTTAAA 6 1115163 0.697687705 2 6 41 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 4:1115152-1115183 6 8.5 2378 FBgn0039928 3212.163333 100.7466667 154.9366667 0.002646192 0.084370037 0.054861126 1 1 1 0.25 dme-miR-184-3p 7mer-m8 TCCGTCC 4 1115354 1115360 - 4_1115354_1115360_- 0.660178835 0.660789952 0.660484394 0.000432184 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 4 - 1115271 1115478 3'utr Cals FlyBase G57338.1 AAATATACACATAAGATCTATTTAATTTATAGTTTGTCAGCCCTCACCTTAAGATGTAAAATGCACATGTCTACCAAATTTCAACTGAATTCTGTCGCAATGCATAGGAGGAAGTTTCTCCGTCCCAATAATTTAAGCCTAATAATAAAACATAAAAAAAATTTGAAATGGATCGTAATACCCAAACAATGTTGACTTATTTAATAAA 253 1115361 0.983445027 36 232 1788 0.918644068 1.8309093 0.088135593 0.134387352 0.257627119 253 21 3 271 4:1115271-1115478 7 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 TCCGTCC 7mer-m8 dme-miR-184-3p 4 - 1115338 1115477 3'utr Cals FlyBase G43326.1 AATATACACATAAGATCTATTTAATTTATAGTTTGTCAGCCCTCACCTTAAGATGTAAAATGCACATGTCTACCAAATTTCAACTGAATTCTGTCGCAATGCATAGGAGGAAGTTTCTCCGTCCCAATAATTTAAGCCTA 119 1115361 0.82768637 25 108 801 0.926966292 2.217483944 0.078651685 0.361344538 0.573033708 119 13 0 165 4:1115338-1115477 7 68 2379 FBgn0039928 3212.163333 100.7466667 154.9366667 0.021169534 0.674960296 0.438889008 1 1 1 0.25 dme-miR-305-5p 8mer-m1 AGTACAAT 4 1115532 1115539 - 4_1115532_1115539_- 0.570362123 0.570362782 0.570362453 4.95E-07 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 4 - 1115501 1115556 3'utr Cals FlyBase G57339.1 AAATATAGCTAAGGTATAGTACAATTATTATGTAACCAGCGTCGCTAGATCCATAA 15 1115531 0.721025649 5 12 107 0.85 1.230448921 0.05 0.266666667 0.45 15 3 0 17 4:1115501-1115556 8 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 AGTACAAT 8mer-m1 dme-miR-305-5p 4 - 1115511 1115558 3'utr Cals FlyBase G43327.1 AAAAATATAGCTAAGGTATAGTACAATTATTATGTAACCAGCGTCGCT 11 1115531 0.724160438 7 8 75 0.769230769 1 0.076923077 0.181818182 0.307692308 11 3 0 10 4:1115511-1115558 8 8.5 2380 FBgn0039928 3212.163333 100.7466667 154.9366667 0.002646192 0.084370037 0.054861126 -8 -8 -8 0.25 dme-miR-276a-3p 6mer3-8 AGTTCC 4 1115721 1115726 - 4_1115721_1115726_- 0.740112651 0.653722093 0.696917372 0.061087379 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 4 - 1115654 1115736 3'utr Cals FlyBase G57340.2 GTTATAAATGAGTTCCAAAGAGTCTGCATATATGGCTGCAGGCATAATTGTAAAGACGTGCATTTATAGTTTTTTTTGCAACA 31 1115724 0.825079658 7 27 186 0.909090909 1.176091259 0.212121212 0.032258065 0.090909091 31 2 1 30 4:1115654-1115736 6 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 AGTTCC 6mer3-8 dme-miR-276a-3p 4 - 1115692 1115738 3'utr Cals FlyBase G43328.1 AAGTTATAAATGAGTTCCAAAGAGTCTGCATATATGGCTGCAGGCAT 11 1115724 0.975506843 2 10 60 0.923076923 1.079181246 0.153846154 0.181818182 0.307692308 11 1 0 12 4:1115692-1115738 6 12.5 2381 FBgn0039928 3212.163333 100.7466667 154.9366667 0.003891458 0.124073584 0.080678127 -2 -2 -2 0.25 dme-miR-932-5p 7mer-m8 GGAATTG 4 1125061 1125067 + 4_1125061_1125067_+ 0.702419268 0.69530602 0.698862644 0.005029863 Arf102F FBtr0089192 1125035 1125325 4 + 1125040 1125142 3'utr Arf102F FlyBase G56613.1 TATTCCTTATATTGTAAGATAGGAATTGCTGTTCTCGTATGCTGAAAACTAGATTTTAAATAAACTTGTAAATGTATATAAACTCGTTTGGAACTTTGTTGTA 43 1125079 0.867436297 14 40 362 0.9375 1.352182518 0.291666667 0.11627907 0.208333333 43 2 1 45 4:1125040-1125142 7 Arf102F FBtr0089192 1125035 1125325 GGAATTG 7mer-m8 dme-miR-932-5p 4 + 1125050 1125102 3'utr Arf102F FlyBase G42763.1 ATTGTAAGATAGGAATTGCTGTTCTCGTATGCTGAAAACTAGATTTTAAATAA 40 1125067 0.690812684 8 36 293 0.938461538 1.183269844 0.215384615 0.5 0.692307692 40 1 3 61 4:1125050-1125102 7 31 2382 FBgn0013749 854.0466667 143.2933333 218.6 0.036297782 0.216339444 0.141811528 -18 -6 -12 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 4 112846 112853 + 4_112846_112853_+ 0.613203031 0.629970526 0.621586778 0.011856413 pan FBtr0309803|FBtr0309803|FBtr0309803 108491|108491|108491 114270|114270|114270 4 + 112824 112867 3'utr pan FlyBase G56212.1 TAGAAATTCAACAAATACACTGCTGTGATAAATCTAATTAACGA 28 112844 0.834744802 3 26 167 0.933333333 1.447158031 0 0.071428571 0.133333333 28 2 0 28 4:112824-112867 8 pan FBtr0309803|FBtr0309803|FBtr0309803 108491|108491|108491 114270|114270|114270 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 4 + 112812 112859 3'utr pan FlyBase G42442.1 TTACATCAAGTTTAGAAATTCAACAAATACACTGCTGTGATAAATCTA 17 112844 0.977483512 5 16 107 0.966666667 1.462397998 0 0.411764706 0.666666667 17 1 0 29 4:112812-112859 8 21.5 2383 FBgn0085432 3045.83 84.67333333 129.51 0.007058831 0.253917014 0.166010347 2 2 2 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 4 1223082 1223087 + 4_1223082_1223087_+ 0.46269249 0.571223374 0.516957932 0.076742935 Mitf FBtr0307327|FBtr0307327|FBtr0307327|FBtr0307328|FBtr0307328|FBtr0307328|FBtr0307326|FBtr0307326|FBtr0307326|FBtr0307329|FBtr0307329|FBtr0307329 1222790|1222790|1222790|1222790|1222790|1222790|1222790|1222790|1222790|1222790|1222790|1222790 1223450|1223450|1223450|1223450|1223450|1223450|1224467|1224467|1224467|1224467|1224467|1224467 4 + 1223051 1223100 5'utr Mitf FlyBase G56626.2 ACGTTAGTTTTAGTAAATGGAAACTGTTAGACTGTGACGAAACAAATATA 338 1223077 0.638489651 6 331 1807 0.985294118 2.303196057 0.424019608 0.174556213 0.316176471 338 5 1 402 4:1223051-1223100 6 Mitf FBtr0307327|FBtr0307327|FBtr0307327|FBtr0307328|FBtr0307328|FBtr0307328|FBtr0307326|FBtr0307326|FBtr0307326|FBtr0307329|FBtr0307329|FBtr0307329 1222790|1222790|1222790|1222790|1222790|1222790|1222790|1222790|1222790|1222790|1222790|1222790 1223450|1223450|1223450|1223450|1223450|1223450|1224467|1224467|1224467|1224467|1224467|1224467 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 4 + 1223051 1223099 5'utr Mitf FlyBase G42775.1 ACGTTAGTTTTAGTAAATGGAAACTGTTAGACTGTGACGAAACAAATAT 269 1223078 0.623494096 7 261 1355 0.976439791 2.571708832 0.363874346 0.31598513 0.518324607 269 9 0 373 4:1223051-1223099 6 302 2384 FBgn0263112 1506.45 56.91333333 87.3 0.200471307 5.306313693 3.459335624 5 4 4.5 0.25 dme-miR-184-5p 6mer3-8 TGATAA 4 1223214 1223219 + 4_1223214_1223219_+ 0.857620231 0.850322483 0.853971357 0.005160253 Mitf FBtr0307327|FBtr0307328|FBtr0307326|FBtr0307329 1222790|1222790|1222790|1222790 1223450|1223450|1224467|1224467 4 + 1223101 1223254 5'utr Mitf FlyBase G56627.1 TGTGTCAACACTTACTTCCAAGAACTACATAGACACAAACAAAATATACCGATGAGAAAAAAAGAATATAAAGTTTGTAAGTTATTGTGGATTTTTTCATAAGATTTGTGATTTGATAAAAAAAACACGAAATAAGAATGGTCTAATATTATAT 53 1223213 0.982291435 15 52 386 0.985294118 1.826074803 0.029411765 0.245283019 0.411764706 53 1 0 67 4:1223101-1223254 6 Mitf FBtr0307327|FBtr0307328|FBtr0307326|FBtr0307329 1222790|1222790|1222790|1222790 1223450|1223450|1224467|1224467 TGATAA 6mer3-8 dme-miR-184-5p 4 + 1223105 1223257 5'utr Mitf FlyBase G42776.1 TCAACACTTACTTCCAAGAACTACATAGACACAAACAAAATATACCGATGAGAAAAAAAGAATATAAAGTTTGTAAGTTATTGTGGATTTTTTCATAAGATTTGTGATTTGATAAAAAAAACACGAAATAAGAATGGTCTAATATTATATATA 36 1223213 0.946059324 14 35 305 0.965517241 1.748188027 0 0.444444444 0.655172414 36 2 0 56 4:1223105-1223257 6 24 2385 FBgn0263112 1506.45 56.91333333 87.3 0.015931495 0.421693803 0.274914089 1 1 1 0.25 dme-miR-184-5p 6mer3-8 TGATAA 4 1223318 1223323 + 4_1223318_1223323_+ 0.460470468 0.546231976 0.503351222 0.060642538 Mitf FBtr0307327|FBtr0307328|FBtr0307326|FBtr0307329 1222790|1222790|1222790|1222790 1223450|1223450|1224467|1224467 4 + 1223263 1223352 5'utr Mitf FlyBase G56628.1 AATCTAAATCATCAGGTATAATTTCAGAGCGCCTTCCTTTTCAAATAAGGAGTTGTGATAATTGTGTATATTAACATTGACAAATGTTTT 59 1223315 0.936208323 14 56 486 0.943661972 1.826074803 0.098591549 0.186440678 0.323943662 59 4 0 67 4:1223263-1223352 6 Mitf FBtr0307327|FBtr0307328|FBtr0307326|FBtr0307329 1222790|1222790|1222790|1222790 1223450|1223450|1224467|1224467 TGATAA 6mer3-8 dme-miR-184-5p 4 + 1223269 1223346 5'utr Mitf FlyBase G42777.1 AATCATCAGGTATAATTTCAGAGCGCCTTCCTTTTCAAATAAGGAGTTGTGATAATTGTGTATATTAACATTGACAAA 45 1223324 0.734396296 13 43 351 0.938461538 1.086359831 0.276923077 0.377777778 0.569230769 45 0 4 61 4:1223269-1223346 6 29 2386 FBgn0263112 1506.45 56.91333333 87.3 0.019250556 0.509546679 0.332187858 3 -6 -1.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 4 1223688 1223694 + 4_1223688_1223694_+ 0.748543102 0.733017098 0.7407801 0.01097854 Mitf FBtr0307326|FBtr0307326|FBtr0307326|FBtr0307329|FBtr0307329|FBtr0307329 1222790|1222790|1222790|1222790|1222790|1222790 1224467|1224467|1224467|1224467|1224467|1224467 4 + 1223622 1223708 3'utr Mitf FlyBase G56629.1 ATGATTCGTTAAAGTTGTCCGATCTTCATGAGTGCTACAGCATTGAAAATGTAGTCCAAAAACTAATGTGATAATATAATAAGAACT 33 1223685 0.863521711 12 30 222 0.95 1.579783597 0.25 0.212121212 0.35 33 2 0 38 4:1223622-1223708 7 Mitf FBtr0307326|FBtr0307326|FBtr0307326|FBtr0307329|FBtr0307329|FBtr0307329 1222790|1222790|1222790|1222790|1222790|1222790 1224467|1224467|1224467|1224467|1224467|1224467 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 4 + 1223629 1223711 3'utr Mitf FlyBase G42779.1 GTTAAAGTTGTCCGATCTTCATGAGTGCTACAGCATTGAAAATGTAGTCCAAAAACTAATGTGATAATATAATAAGAACTTAA 23 1223686 0.971937342 7 22 149 0.971428571 1.230448921 0.085714286 0.391304348 0.6 23 0 1 34 4:1223629-1223711 7 15.5 2387 FBgn0263112 1506.45 56.91333333 87.3 0.01028909 0.272343915 0.177548683 3 2 2.5 0.25 dme-bantam-3p 6mer3-8 TGATCT 4 1225679 1225684 - 4_1225679_1225684_- 0.987405885 0.67911245 0.833259168 0.217996424 Dyrk3 FBtr0100406 1225087 1226157 4 - 1225672 1225732 3'utr Dyrk3 FlyBase G57397.1 ATCGAATGTGTACATTATTTATTTAATAATTCCGAATTTTTAAAACAGTGATCTTTGCCAA 9 1225682 0.990629088 6 8 76 0.916666667 0.740362689 0 0.333333333 0.5 9 0 1 11 4:1225672-1225732 6 Dyrk3 FBtr0100406 1225087 1226157 TGATCT 6mer3-8 dme-bantam-3p 4 - 1225665 1225694 3'utr Dyrk3 FlyBase G43373.1 TTTAAAACAGTGATCTTTGCCAATTTTTTT 8 1225680 0.625997628 3 7 57 0.916666667 1.041392685 0 0.25 0.5 8 1 0 11 4:1225665-1225694 6 7.5 2388 FBgn0027101 1644.923333 56.32666667 86.10666667 0.004559483 0.133151852 0.08710127 -2 -4 -3 0.25 dme-miR-276a-3p 8mer-A1 AGTTCCTA 4 142899 142906 + 4_142899_142906_+ 0.637427352 0.633726338 0.635576845 0.002617073 CG32000 FBtr0089451|FBtr0089448|FBtr0089449|FBtr0333161|FBtr0113417 142794|142794|142794|142794|142794 143123|143123|143123|143123|143123 4 + 142850 143089 3'utr CG32000 FlyBase G56253.1 TTAGGAATTTCCATTATTAATACAGTAGAAAATGTAGGCAAAATTATTTAGTTCCTATTTAGTTTTTTTAGTAATCTTAGTATTTCTAATTGTACTTACATCAAAGATAACTTTGTATTAGCTATGAACACTTTTGTCTTTCTATGTTTAAAACGGCGTTGTTTCTTGATTATAATTAAGTGTTTGATGTTTATATACATAAGCAAAAATTCATATAGGCTGTATAATAAGCATTGGAGT 206 142897 0.934845437 41 188 2096 0.92519685 1.893946608 0.165354331 0.175609756 0.334645669 205 17 2 235 4:142850-143089 8 CG32000 FBtr0089451|FBtr0113417|FBtr0333161|FBtr0089449|FBtr0089448 142794|142794|142794|142794|142794 143123|143123|143123|143123|143123 AGTTCCTA 8mer-A1 dme-miR-276a-3p 4 + 142845 143032 3'utr CG32000 FlyBase G42466.1 TACTTTTAGGAATTTCCATTATTAATACAGTAGAAAATGTAGGCAAAATTATTTAGTTCCTATTTAGTTTTTTTAGTAATCTTAGTATTTCTAATTGTACTTACATCAAAGATAACTTTGTATTAGCTATGAACACTTTTGTCTTTCTATGTTTAAAACGGCGTTGTTTCTTGATTATAATTAAGTGT 105 142897 0.992228598 31 98 1136 0.944099379 2.181843588 0.198757764 0.40952381 0.614906832 105 9 0 152 4:142845-143032 8 41.5 2389 FBgn0052000 5598.68 138.82 213.5633333 0.007412462 0.298948278 0.194321747 2 2 2 0.25 dme-miR-184-5p 6mer2-7 GATAAG 4 197149 197154 - 4_197149_197154_- 0.893166886 0.913269993 0.90321844 0.014215038 CG31998 FBtr0308249 196673 197877 4 - 197137 197191 3'utr CG31998 FlyBase G56758.1 TTTAAAGTTCATAAAAGAAATATTGGTTTTCATGTAAGATAAGTATTTTAAAAAG 14 197159 0.988962131 6 12 117 0.941176471 0.903089987 0.176470588 0.214285714 0.352941176 14 0 1 16 4:197137-197191 6 CG31998 FBtr0308249 196673 197877 GATAAG 6mer2-7 dme-miR-184-5p 4 - 197131 197169 3'utr CG31998 FlyBase G42878.1 TTGGTTTTCATGTAAGATAAGTATTTTAAAAAGGCCGTA 8 197159 0.977043385 2 8 71 1 1 0.2 0.25 0.4 8 0 0 10 4:197131-197169 6 9.5 2390 FBgn0051998 3188.316667 75.81333333 116.5333333 0.002979629 0.125307773 0.081521739 5 5 5 0.25 dme-miR-184-5p 7mer-A1 GATAAGA 4 212845 212851 + 4_212845_212851_+ 0.652135397 0.514087162 0.583111279 0.097614818 Crk FBtr0304871|FBtr0345065|FBtr0345064 212179|211892|212726 213165|213165|213165 4 + 212792 212878 3'utr Crk FlyBase G56261.1 GAAAACTACCTGCATACGCCCGCGTAAAACAGTCAAGGGTCCCTAACGCATACGATAAGACTGCATTAAAATTGGAAATAGGTGACA 126 212847 0.919134827 9 108 609 0.873417722 1.838849091 0.03164557 0.222222222 0.379746835 126 19 1 138 4:212792-212878 7 Crk FBtr0304871|FBtr0345065|FBtr0345064 212179|211892|212726 213165|213165|213165 GATAAGA 7mer-A1 dme-miR-184-5p 4 + 212827 212867 3'utr Crk FlyBase G42475.1 AGGGTCCCTAACGCATACGATAAGACTGCATTAAAATTGGA 68 212847 0.775801572 6 58 303 0.846153846 1.467361417 0 0.352941176 0.576923077 68 14 2 88 4:212827-212867 7 90 2391 FBgn0024811 1520.34 187.5933333 288.2066667 0.059197285 0.479761186 0.312275913 -2 -2 -2 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 4 212980 212986 + 4_212980_212986_+ 0.520072432 0.478463044 0.499267738 0.029422289 Crk FBtr0304871|FBtr0345065|FBtr0345064 212179|211892|212726 213165|213165|213165 4 + 212892 213006 3'utr Crk FlyBase G56262.1 TAAAACAAACATTAATGGGCAATGGGAGGGAGAATTAAATGGAAAAAATGGTCATTTTCCCTTCACGCACGTTGAATTTGTCGATGATTGTGATTTAAGCAAAAACTCCACAGAA 117 212980 0.952349745 11 109 972 0.944827586 1.291622527 0.379310345 0.179487179 0.337931034 117 2 6 137 4:212892-213006 7 Crk FBtr0304871|FBtr0345065|FBtr0345064 212179|211892|212726 213165|213165|213165 TGTGATT 7mer-m1 dme-miR-308-3p 4 + 212938 213102 stop_codon Crk FlyBase G42477.1 AATGGTCATTTTCCCTTCACGCACGTTGAATTTGTCGATGATTGTGATTTAAGCAAAAACTCCACAGAAATATGCTAAATAGGAAGGAATGGAAGGAATTTCTTTTGATAATTTTGATTTTTGAGCTAATTGTATGATTAATAAGTTGTGCATACCAATTGTTAA 86 212986 0.986669183 16 85 727 0.992248062 2.10720997 0.310077519 0.360465116 0.573643411 86 1 0 128 4:212938-213102 7 86.5 2392 FBgn0024811 1520.34 187.5933333 288.2066667 0.056895168 0.461103806 0.30013185 0 -6 -3 0.25 dme-miR-308-3p 7mer-m1 TGTGATT 4 241000 241006 + 4_241000_241006_+ 0.386086038 0.388098291 0.387092165 0.001422911 CG1674 FBtr0089119 240876 241318 4 + 240910 241026 5'utr CG1674 FlyBase G56268.1 ACACTGATTGCAACTTTTAGTACAGTGGTCAAGAAAAATCTCATTAGTCTAACTCTCCACTATAACAGGGATACCCCGTTTCCCATTGTATGTGATTTTTGTTAAAAATTTAAGTTT 46 240996 0.992683486 13 43 501 0.924528302 1.389166084 0.20754717 0.152173913 0.264150943 46 3 1 49 4:240910-241026 7 CG1674 FBtr0089119 240876 241318 TGTGATT 7mer-m1 dme-miR-308-3p 4 + 240974 241015 5'utr CG1674 FlyBase G42483.1 ACAGGGATACCCCGTTTCCCATTGTATGTGATTTTTGTTAAA 25 240996 0.786598585 4 22 313 0.794117647 1.431363764 0.205882353 0.32 0.5 25 7 0 27 4:240974-241015 7 27.5 2393 FBgn0039897 839.9 47.17666667 72.43333333 0.032741993 0.582915283 0.379659457 4 4 4 0.25 dme-bantam-3p 8mer-A1 TGATCTCA 4 280187 280194 - 4_280187_280194_- 0.447237936 0.582035269 0.514636602 0.095316156 Syt7 FBtr0089134 278683 280425 4 - 280152 280210 3'utr Syt7 FlyBase G56793.1 AAACATTGGCAGGACATGATCTCAAAGCCCAGACAAACTGTAGTACAATGGCATCGCTT 6 280194 0.899832612 3 6 26 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 4:280152-280210 8 Syt7 FBtr0089134 278683 280425 TGATCTCA 8mer-A1 dme-bantam-3p 4 - 280151 280210 3'utr Syt7 FlyBase G42902.1 AAACATTGGCAGGACATGATCTCAAAGCCCAGACAAACTGTAGTACAATGGCATCGCTTA 9 280194 0.942961179 4 9 40 1 1.041392685 0 0.111111111 0.272727273 9 0 0 11 4:280151-280210 8 5.5 2394 FBgn0039900 11 0.483333333 0.74 0.5 11.37931034 7.432432432 0 0 0 0.25 dme-miR-252-5p 6mer3-8 GTACTT 4 310320 310325 + 4_310320_310325_+ 0.995123036 0.996556867 0.995839951 0.00101392 Rad23 FBtr0333679 310188 310822 4 + 310206 310340 3'utr Rad23 FlyBase G56282.1 AAGTTATGCAAATAACACCGGAAGCGTTACATTTAAAGTTAGATGTTCTTAAATTAAATGTAAAATGTCGATCATAAAAATTCTTTTATATTCTTTTAATACCGTCGGCGTATTGTACTTGTTATTTGTTAAAAA 38 310319 0.988544205 14 38 337 1 1.662757832 0.130434783 0.131578947 0.282608696 38 0 0 46 4:310206-310340 6 Rad23 FBtr0333679 310188 310822 GTACTT 6mer3-8 dme-miR-252-5p 4 + 310301 310341 3'utr Rad23 FlyBase G42496.1 TTAATACCGTCGGCGTATTGTACTTGTTATTTGTTAAAAAT 15 310319 0.735361194 6 12 167 0.866666667 0.937852093 0.033333333 0.733333333 0.866666667 15 2 2 26 4:310301-310341 6 19.5 2395 FBgn0026777 1534.613333 122.59 187.9666667 0.012706784 0.159066808 0.103741798 1 1 1 0.25 dme-miR-7-5p 6mer3-8 GTCTTC 4 310403 310408 + 4_310403_310408_+ 0.934641852 0.985876432 0.960259142 0.036228262 Rad23 FBtr0333679 310188 310822 4 + 310361 310454 3'utr Rad23 FlyBase G56283.1 GAGTTACGATGTCATTTTTACTAAATATTTCACCACGACATTGTCTTCAGCATAAGACTGCAAATGTCTACAAATTTATCTGTGCCAATCCATG 43 310401 0.978924784 10 43 294 1 1.69019608 0.020408163 0.139534884 0.244897959 43 0 0 49 4:310361-310454 6 Rad23 FBtr0333679 310188 310822 GTCTTC 6mer3-8 dme-miR-7-5p 4 + 310360 310429 3'utr Rad23 FlyBase G42497.1 AGAGTTACGATGTCATTTTTACTAAATATTTCACCACGACATTGTCTTCAGCATAAGACTGCAAATGTCT 40 310401 0.977940811 6 37 248 0.929824561 1.423245874 0.210526316 0.325 0.526315789 40 3 1 53 4:310360-310429 6 38 2396 FBgn0026777 1534.613333 122.59 187.9666667 0.024761938 0.309976344 0.202163504 2 2 2 0.25 dme-miR-304-5p 6mer2-7 GAGATT 4 311138 311143 - 4_311138_311143_- 0.999991149 0.999994589 0.999992869 2.47E-06 Zip102B FBtr0089133|FBtr0340652|FBtr0340653|FBtr0333681 310928|310928|310928|310928 312789|312789|312789|312789 4 - 311063 311237 3'utr Zip102B FlyBase G56795.1 TAATTCTTGTGTCTTTGAATCTACATTGAGTCAGGAAAGATTTATAATTGTAGCAACATTATAGAGGGGACCATAGCCATACATGAAACTATTAGAGATTTATTAATATTAAAGTGTAGAATTCTTTGCATTAATAATGCATATTACAATGTTCGAGTTTTATATTTGTCGTATT 29 311157 0.989731084 11 23 231 0.84375 1.130333768 0.15625 0.103448276 0.1875 29 4 1 27 4:311063-311237 6 Zip102B FBtr0333681|FBtr0340653|FBtr0340652|FBtr0089133 310928|310928|310928|310928 312789|312789|312789|312789 GAGATT 6mer2-7 dme-miR-304-5p 4 - 311110 311180 3'utr Zip102B FlyBase G42903.1 ATTATAGAGGGGACCATAGCCATACATGAAACTATTAGAGATTTATTAATATTAAAGTGTAGAATTCTTTG 12 311153 0.980001397 8 11 84 0.8125 1.113943352 0.125 0.25 0.4375 12 3 0 13 4:311110-311180 6 9 2397 FBgn0039902 844.14 35.44333333 54.17 0.010661739 0.253926455 0.166143622 14 10 12 0.25 dme-bantam-3p 7mer-m8 TGATCTC 4 311832 311838 - 4_311832_311838_- 0.652991702 0.654379467 0.653685584 0.000981323 Zip102B FBtr0089133|FBtr0340652|FBtr0340653|FBtr0333681 310928|310928|310928|310928 312789|312789|312789|312789 4 - 311805 311917 3'utr Zip102B FlyBase G56799.2 GTTTTTGACTATGACGAGTCTGCTGGCGAAATTCGGCGCCGACTTGCGTACTATTCCTTTTCGTTGCCATTCCGAAACCTGATCTCGATTCTCTTCTCCTTGGGCACAATCGA 142 311838 0.854386643 19 128 1086 0.890243902 1.01822482 0.164634146 0.11971831 0.237804878 142 5 13 146 4:311805-311917 7 Zip102B FBtr0333681|FBtr0340653|FBtr0340652|FBtr0089133 310928|310928|310928|310928 312789|312789|312789|312789 TGATCTC 7mer-m8 dme-bantam-3p 4 - 311809 311902 3'utr Zip102B FlyBase G42906.1 GAGTCTGCTGGCGAAATTCGGCGCCGACTTGCGTACTATTCCTTTTCGTTGCCATTCCGAAACCTGATCTCGATTCTCTTCTCCTTGGGCACAA 92 311838 0.98512193 12 85 691 0.907142857 1.404833717 0.114285714 0.391304348 0.6 92 9 4 127 4:311809-311902 7 107.5 2398 FBgn0039902 844.14 35.44333333 54.17 0.127348544 3.033010439 1.984493262 0 0 0 0.25 dme-miR-1006-3p 7mer-A1 GAATTTA 4 312652 312658 - 4_312652_312658_- 0.822868932 0.79615209 0.809510511 0.01889163 Zip102B FBtr0089133|FBtr0340652|FBtr0340653|FBtr0333681 310928|310928|310928|310928 312789|312789|312789|312789 4 - 312643 312758 3'utr Zip102B FlyBase G56804.1 AAGATGAAGTAAAAGTTAAGGGATATTAAGCTATAAATATATTGGGTTTAATTTCTCGGATATACAATTATTAACATTAAGTGCTTTGCACAAAGATTTTGAATTTAATGAATTGT 21 312660 0.855593012 12 20 169 0.965517241 1.146128036 0.172413793 0.285714286 0.482758621 21 0 1 28 4:312643-312758 7 Zip102B FBtr0333681|FBtr0340653|FBtr0340652|FBtr0089133 310928|310928|310928|310928 312789|312789|312789|312789 GAATTTA 7mer-A1 dme-miR-1006-3p 4 - 312632 312695 3'utr Zip102B FlyBase G42909.1 ACAATTATTAACATTAAGTGCTTTGCACAAAGATTTTGAATTTAATGAATTGTCGCATGAAAGT 16 312660 0.988502865 8 15 133 0.954545455 1.322219295 0.090909091 0.3125 0.5 16 1 0 21 4:312632-312695 7 10 2399 FBgn0039902 844.14 35.44333333 54.17 0.011846376 0.282140506 0.184604024 2 2 2 0.25 dme-miR-1008-3p 8mer-A1 AGCTGTGA 4 329071 329078 - 4_329071_329078_- 0.597231742 0.616988217 0.60710998 0.013969955 PMCA FBtr0304046|FBtr0304049|FBtr0300555|FBtr0300554|FBtr0304047|FBtr0300557|FBtr0300556|FBtr0304048 328814|328814|328814|328814|328814|328814|328814|328191 329206|329206|331564|329206|329206|329206|329206|329206 4 - 329056 329094 3'utr PMCA FlyBase G56818.1 AGGATAACAGCAATGTAGCTGTGAATTGGTTAAAAAGCA 11 329080 0.762025845 4 10 69 1 1.176091259 0.2 0.272727273 0.466666667 11 0 0 15 4:329056-329094 8 PMCA FBtr0304047|FBtr0300554|FBtr0300556|FBtr0300557|FBtr0304048|FBtr0304046|FBtr0304049|FBtr0300555 328814|328814|328814|328814|328191|328814|328814|328814 329206|329206|329206|329206|329206|329206|329206|331564 AGCTGTGA 8mer-A1 dme-miR-1008-3p 4 - 329018 329110 3'utr PMCA FlyBase G42920.1 AAAAAAGGTTTTGTTCAGGATAACAGCAATGTAGCTGTGAATTGGTTAAAAAGCATTTTGTAATTCAGCAAAAATAATCCGTAAAAAAAATGT 11 329080 0.97955405 7 11 72 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 4:329018-329110 8 8.5 2400 FBgn0259214 5766.78 152.7933333 233.7433333 0.001473959 0.055630699 0.036364674 2 2 2 0.25 dme-miR-965-3p 6mer3-8 TACGCT 4 372497 372502 + 4_372497_372502_+ 0.996917263 0.999459806 0.998188535 0.001797819 Hcf FBtr0334479|FBtr0345284|FBtr0089126|FBtr0089125|FBtr0307379 372391|372391|372391|372391|372391 372784|375554|372784|374973|372784 4 + 372451 372540 3'utr Hcf FlyBase G56327.1 AAAGTATGCTATTAGCTTTTCCGTTTTTACAGCTTCCAATAGACTTTACGCTGAATTCAAAATGATTACAACGAAACTTGAATATTATTG 56 372490 0.794175169 8 55 386 0.98630137 1.857332496 0.150684932 0.196428571 0.383561644 56 1 0 72 4:372451-372540 6 Hcf FBtr0089125|FBtr0307379|FBtr0345284|FBtr0089126|FBtr0334479 372391|372391|372391|372391|372391 374973|372784|375554|372784|372784 TACGCT 6mer3-8 dme-miR-965-3p 4 + 372476 372547 3'utr Hcf FlyBase G42525.1 TTTACAGCTTCCAATAGACTTTACGCTGAATTCAAAATGATTACAACGAAACTTGAATATTATTGCTATTAA 30 372491 0.980375031 7 28 199 0.956521739 1.643452676 0.152173913 0.333333333 0.565217391 30 2 0 44 4:372476-372547 6 38 2401 FBgn0039904 2694.423333 58.45333333 89.53333333 0.014103203 0.650091241 0.424422934 7 6 6.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 4 372718 372723 + 4_372718_372723_+ 0.934138252 0.9576343 0.945886276 0.016614181 Hcf FBtr0334479|FBtr0345284|FBtr0089126|FBtr0089125|FBtr0307379 372391|372391|372391|372391|372391 372784|375554|372784|374973|372784 4 + 372677 372729 3'utr Hcf FlyBase G56329.1 AATAATATATAATATTTTCCTTATCATGAACTCTACAACACTCTAGTGTATAT 12 372704 0.984352927 6 10 84 0.9375 0.875061263 0 0.166666667 0.375 12 0 1 15 4:372677-372729 6 Hcf FBtr0089125|FBtr0307379|FBtr0345284|FBtr0089126|FBtr0334479 372391|372391|372391|372391|372391 374973|372784|375554|372784|372784 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 4 + 372687 372727 3'utr Hcf FlyBase G42527.1 AATATTTTCCTTATCATGAACTCTACAACACTCTAGTGTAT 5 372697 0.982720845 4 4 30 1 0.903089987 0 0.4 0.625 5 0 0 8 4:372687-372727 6 4.5 2402 FBgn0039904 2694.423333 58.45333333 89.53333333 0.001670116 0.076984489 0.050260611 14 21 17.5 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 4 437069 437074 - 4_437069_437074_- 0.905643214 0.826393791 0.866018502 0.056037788 lgs FBtr0089111 436955 437385 4 - 437049 437096 3'utr lgs FlyBase G56865.1 TTAATATGTGCGCTGCTCTCTCTGTGTTAAATGAAATTAAAATATATA 111 437076 0.982241423 10 106 967 0.95035461 1.649983544 0.517730496 0.216216216 0.382978723 111 5 2 134 4:437049-437096 6 lgs FBtr0089111 436955 437385 TGTGTT 6mer3-8 dme-miR-317-3p 4 - 437056 437094 3'utr lgs FlyBase G42953.1 AATATGTGCGCTGCTCTCTCTGTGTTAAATGAAATTAAA 77 437076 0.738180252 6 69 679 0.900826446 2.037426498 0.52892562 0.402597403 0.619834711 77 12 0 109 4:437056-437094 6 94 2403 FBgn0039907 1610.766667 36.50666667 56.17666667 0.058357304 2.574872169 1.673292589 2 2 2 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 4 453270 453276 + 4_453270_453276_+ 0.616675701 0.640041768 0.628358735 0.016522328 CaMKI FBtr0089067|FBtr0333670|FBtr0089069|FBtr0089063|FBtr0089065 453198|453198|453198|453198|453198 453947|453947|453947|453947|453947 4 + 453246 453349 3'utr CaMKI FlyBase G56343.1 ACATTTTTGAATTTTAACAATTGTTCTAGTCTAGTAAATATCTCGTACTAACGAATCCGATATAATTTCTCAATCGAAAATGCCAATCAAATAACATATAATGT 32 453268 0.98966367 8 30 286 0.952380952 1.602059991 0.119047619 0.1875 0.380952381 32 2 0 40 4:453246-453349 7 CaMKI FBtr0089065|FBtr0089063|FBtr0089069|FBtr0333670|FBtr0089067 453198|453198|453198|453198|453198 453947|453947|453947|453947|453947 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 4 + 453254 453284 3'utr CaMKI FlyBase G42538.1 GAATTTTAACAATTGTTCTAGTCTAGTAAAT 9 453269 0.611747169 5 7 75 0.75 1.079181246 0.4375 0.444444444 0.6875 9 4 0 12 4:453254-453284 7 18 2404 FBgn0016126 937.6466667 46.26 70.96333333 0.019196997 0.389105058 0.253652121 2 1 1.5 0.25 dme-miR-1012-3p 6mer3-8 TTGACT 4 453799 453804 + 4_453799_453804_+ 0.913993543 0.950842437 0.93241799 0.026056107 CaMKI FBtr0089067|FBtr0333670|FBtr0089069|FBtr0089063|FBtr0089065 453198|453198|453198|453198|453198 453947|453947|453947|453947|453947 4 + 453778 453827 3'utr CaMKI FlyBase G56346.1 TCTTAAGCAGATGATTTGGTGTTGACTGGAAATTTTTAGTATTAAGATGT 13 453799 0.963684023 8 9 124 0.75 0.602059991 0.25 0.153846154 0.3125 13 2 2 12 4:453778-453827 6 CaMKI FBtr0089065|FBtr0089063|FBtr0089069|FBtr0333670|FBtr0089067 453198|453198|453198|453198|453198 453947|453947|453947|453947|453947 TTGACT 6mer3-8 dme-miR-1012-3p 4 + 453782 453826 3'utr CaMKI FlyBase G42539.1 AAGCAGATGATTTGGTGTTGACTGGAAATTTTTAGTATTAAGATG 10 453797 0.643485661 7 9 99 0.944444444 1.230448921 0.388888889 0.5 0.722222222 10 1 0 17 4:453782-453826 6 10 2405 FBgn0016126 937.6466667 46.26 70.96333333 0.010664998 0.216169477 0.140917845 0 2 1 0.25 dme-miR-980-3p 6mer3-8 GGCAGC 4 471331 471336 - 4_471331_471336_- 0.978096251 0.985801254 0.981948752 0.005448258 Asator FBtr0332906|FBtr0300344|FBtr0332905|FBtr0300342 469407|471284|471284|471284 472288|474884|472288|472288 4 - 471315 471354 3'utr Asator FlyBase G56907.1 ATTTAAAAATAAAGCGTTGGCAGCGATTGTTCTTAAAAAC 8 471337 0.794746052 3 8 51 1 0.954242509 0 0.125 0.222222222 8 0 0 9 4:471315-471354 6 Asator FBtr0332905|FBtr0300342|FBtr0332906|FBtr0300344 471284|471284|469407|471284 472288|472288|472288|474884 GGCAGC 6mer3-8 dme-miR-980-3p 4 - 471313 471346 3'utr Asator FlyBase G42985.1 ATAAAGCGTTGGCAGCGATTGTTCTTAAAAACAA 5 471337 0.950841207 3 5 28 1 0.903089987 0 0.4 0.625 5 0 0 8 4:471313-471346 6 6.5 2406 FBgn0039908 319.3933333 7.256666667 11.06333333 0.020351082 0.895728066 0.587526363 1 1 1 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA 4 471683 471690 - 4_471683_471690_- 0.446307576 0.409809919 0.428058748 0.025807771 Asator FBtr0332906|FBtr0300344|FBtr0332905|FBtr0300342 469407|471284|471284|471284 472288|474884|472288|472288 4 - 471673 471716 3'utr Asator FlyBase G56909.1 AAAGTCATGGATTATGACACATTGCTGTACTTAACTACATTTTT 30 471691 0.736390248 6 29 224 0.942857143 1.51851394 0.114285714 0.133333333 0.257142857 30 2 0 33 4:471673-471716 8 Asator FBtr0332905|FBtr0300342|FBtr0332906|FBtr0300344 471284|471284|469407|471284 472288|472288|472288|474884 GTACTTAA 8mer-A1 dme-miR-252-5p 4 - 471679 471714 3'utr Asator FlyBase G42987.1 AGTCATGGATTATGACACATTGCTGTACTTAACTAC 35 471691 0.747449474 4 32 276 0.909090909 1.22184875 0.072727273 0.342857143 0.581818182 35 3 2 50 4:471679-471714 8 31.5 2407 FBgn0039908 319.3933333 7.256666667 11.06333333 0.098624476 4.340836013 2.847243146 1 1 1 0.25 dme-miR-13b-2-5p 6mer3-8 TTTGAC 4 539704 539709 + 4_539704_539709_+ 0.927827907 0.942655908 0.935241908 0.010484979 zfh2 FBtr0307167|FBtr0089070 538553|538553 540874|539792 4 + 539687 539733 3'utr zfh2 FlyBase G56447.1 TTTAAAAGAAAATAATATTTGACTGAAAATTAAAATATAAAAAAATT 89 539704 0.686349165 6 82 640 0.927272727 1.707570176 0 0.213483146 0.363636364 89 7 1 102 4:539687-539733 6 zfh2 FBtr0307167|FBtr0089070 538553|538553 540874|539792 TTTGAC 6mer3-8 dme-miR-13b-2-5p 4 + 539689 539736 3'utr zfh2 FlyBase G42627.1 TAAAAGAAAATAATATTTGACTGAAAATTAAAATATAAAAAAATTAAA 44 539704 0.660890058 7 42 323 0.936507937 1.293730757 0 0.318181818 0.523809524 44 2 2 59 4:539689-539736 6 66.5 2408 FBgn0004607 3.003333333 0.04 0.056666667 22.14206437 1662.5 1173.529412 0 0 0 0.25 dme-miR-276a-3p 8mer-A1 AGTTCCTA 4 539872 539879 + 4_539872_539879_+ 0.511312824 0.433957997 0.472635411 0.054698104 zfh2 FBtr0307167 538553 540874 4 + 539857 539918 3'utr zfh2 FlyBase G56448.1 AAGAATCTACTAAGAAGTTCCTATAGAATTTAATAAAAAGATATACAAATATATTTACGTGT 41 539863 0.8646097 9 24 357 0.565217391 0.812913357 0.065217391 0.12195122 0.217391304 41 17 3 26 4:539857-539918 8 zfh2 FBtr0307167 538553 540874 AGTTCCTA 8mer-A1 dme-miR-276a-3p 4 + 539858 539897 3'utr zfh2 FlyBase G42629.1 AGAATCTACTAAGAAGTTCCTATAGAATTTAATAAAAAGA 20 539864 0.804114552 8 17 157 0.88 0.865301426 0 0.2 0.36 20 1 2 22 4:539858-539897 8 29 2409 FBgn0004607 3.003333333 0.04 0.056666667 9.655937847 725 511.7647059 9 8 8.5 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA 4 540045 540052 + 4_540045_540052_+ 0.371084354 0.331303795 0.351194074 0.028129132 zfh2 FBtr0307167 538553 540874 4 + 539988 540099 3'utr zfh2 FlyBase G56449.1 TGTAGAAATAATGTCATATATAAATATGTGAATGTTTGAAATCCCATTTAAATACATGTACTTAAGCCTTCACAATTGCCAACAAACACAGATATGGACAGAATACCATACT 64 540044 0.921574665 9 62 441 0.974025974 1.875061263 0.090909091 0.171875 0.311688312 64 2 0 75 4:539988-540099 8 zfh2 FBtr0307167 538553 540874 GTACTTAA 8mer-A1 dme-miR-252-5p 4 + 540027 540092 3'utr zfh2 FlyBase G42632.1 AATCCCATTTAAATACATGTACTTAAGCCTTCACAATTGCCAACAAACACAGATATGGACAGAATA 40 540044 0.890217003 5 38 232 0.920634921 1.161368002 0.015873016 0.4 0.619047619 40 2 3 58 4:540027-540092 8 42 2410 FBgn0004607 3.003333333 0.04 0.056666667 13.98446171 1050 741.1764706 1 1 1 0.25 dme-miR-184-3p 7mer-m8 TCCGTCC 4 542001 542007 - 4_542001_542007_- 0.650537066 0.649786035 0.650161551 0.000531108 Thd1 FBtr0345197|FBtr0333706 538330|540558 545662|545662 4 - 541984 542027 3'utr Thd1 FlyBase G56931.1 ATCGAGTCGAACTGGCCATTTCCGTCCGTCTGAGGGCTCATCTT 36 542008 0.753355223 4 35 258 0.976190476 1.612783857 0.238095238 0.166666667 0.285714286 36 1 0 41 4:541984-542027 7 Thd1 FBtr0333706|FBtr0345197 540558|538330 545662|545662 TCCGTCC 7mer-m8 dme-miR-184-3p 4 - 541984 542025 3'utr Thd1 FlyBase G42999.1 CGAGTCGAACTGGCCATTTCCGTCCGTCTGAGGGCTCATCTT 22 542008 0.762194712 3 22 158 1 1.477121255 0.233333333 0.318181818 0.5 22 0 0 30 4:541984-542025 7 29 2411 FBgn0026869 3486.926667 66.67 102.3333333 0.008316779 0.434978251 0.283387622 1 1 1 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA 4 545346 545353 - 4_545346_545353_- 0.497615635 0.496312789 0.496964212 0.000921219 Thd1 FBtr0345197|FBtr0089106|FBtr0333706 538330|545266|540558 545662|545662|545662 4 - 545333 545368 3'utr Thd1 FlyBase G56939.2 CCGAAACAATTGTTTGTACTTAAATCATTTAAGCAT 53 545354 0.697814862 4 48 487 0.938461538 1.785329835 0.076923077 0.188679245 0.338461538 53 4 0 61 4:545333-545368 8 Thd1 FBtr0333706|FBtr0345197 540558|538330 545662|545662 GTACTTAA 8mer-A1 dme-miR-252-5p 4 - 545266 545372 3'utr Thd1 FlyBase G43004.1 GATCCCGAAACAATTGTTTGTACTTAAATCATTTAAGCATACTTTATTTTACTCACACACAAATATTGCGAAACTTACTAGTATATAATAAAGTTTTAAAATAATAA 41 545354 0.978728484 10 38 385 0.927272727 1.40654018 0.163636364 0.268292683 0.454545455 41 3 1 51 4:545266-545372 8 41.5 2412 FBgn0026869 3486.926667 66.67 102.3333333 0.011901598 0.622468877 0.405537459 1 1 1 0.25 dme-miR-2535b-3p 6mer3-8 CCGTGA 4 565765 565770 + 4_565765_565770_+ 0.870588195 0.662170738 0.766379466 0.147373428 Pur-alpha FBtr0310640|FBtr0089995|FBtr0089994|FBtr0310639|FBtr0089993|FBtr0310638|FBtr0089996 565755|565755|565755|565755|565755|565755|565755 567257|565931|565931|565931|567257|567257|565931 4 + 565741 565795 stop_codon Pur-alpha FlyBase G56460.2 AAATAGTCTTAAATAAACAACATACCGTGATTTACTAAGTTATATAAGAAGGCGC 93 565772 0.650600224 7 92 544 0.991304348 2.056904851 0 0.204301075 0.356521739 93 1 0 114 4:565741-565795 6 Pur-alpha FBtr0310639|FBtr0089994|FBtr0089995|FBtr0310640|FBtr0089996|FBtr0310638|FBtr0089993 565755|565755|565755|565755|565755|565755|565755 565931|565931|565931|567257|565931|567257|567257 CCGTGA 6mer3-8 dme-miR-2535b-3p 4 + 565683 565789 stop_codon Pur-alpha FlyBase G42638.1 AGAAAATGAAAAAATCGTCCGACTCAATTACTGCCGAAATTAACTTACCTACATCTTCAAATAGTCTTAAATAAACAACATACCGTGATTTACTAAGTTATATAAGA 93 565772 0.916697773 11 90 496 0.972972973 1.857332496 0.027027027 0.451612903 0.655405405 93 3 1 144 4:565683-565789 6 82 2413 FBgn0022361 255.0033333 15.47333333 23.55666667 0.321564424 5.299439897 3.480967879 -7 -7 -7 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 4 566727 566732 + 4_566727_566732_+ 0.730404362 0.730776925 0.730590643 0.000263397 Pur-alpha FBtr0310640|FBtr0310640|FBtr0310640|FBtr0089993|FBtr0089993|FBtr0089993|FBtr0310638|FBtr0310638|FBtr0310638 565755|565755|565755|565755|565755|565755|565755|565755|565755 567257|567257|567257|567257|567257|567257|567257|567257|567257 4 + 566697 566788 3'utr Pur-alpha FlyBase G56466.1 CCTAAACTCGTTTTTAAAACAAAAGTTTCATGTGATCACGTAGAATAAAAACTTACTAAGTACGATGAACATGCATAGCAAAATAACAACAT 166 566724 0.92125605 13 145 1139 0.875 1.604765885 0.130434783 0.096385542 0.184782609 166 20 3 161 4:566697-566788 6 Pur-alpha FBtr0310640|FBtr0310640|FBtr0310640|FBtr0310638|FBtr0310638|FBtr0310638|FBtr0089993|FBtr0089993|FBtr0089993 565755|565755|565755|565755|565755|565755|565755|565755|565755 567257|567257|567257|567257|567257|567257|567257|567257|567257 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 4 + 566700 566766 3'utr Pur-alpha FlyBase G42642.1 AAACTCGTTTTTAAAACAAAAGTTTCATGTGATCACGTAGAATAAAAACTTACTAAGTACGATGAAC 99 566724 0.98569285 7 79 673 0.817567568 1.605664116 0.101351351 0.333333333 0.554054054 99 25 2 121 4:566700-566766 6 124.5 2414 FBgn0022361 255.0033333 15.47333333 23.55666667 0.488228912 8.046100819 5.28512806 3 3 3 0.25 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 4 577873 577879 + 4_577873_577879_+ 0.822919638 0.816574851 0.819747245 0.00448638 Ephrin FBtr0089076|FBtr0089077|FBtr0089075 577321|577321|577321 578143|580122|578143 4 + 577861 577903 3'utr Ephrin FlyBase G56490.1 CAGCTATATTTTTACCTGACTTCGCGTCTATTAGCTAAAATGA 8 577871 0.868935113 4 6 55 0.777777778 0.84509804 0.222222222 0.125 0.222222222 8 2 0 7 4:577861-577903 7 Ephrin FBtr0089077|FBtr0089075|FBtr0089076 577321|577321|577321 580122|578143|578143 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 4 + 577860 577890 3'utr Ephrin FlyBase G42658.1 ACAGCTATATTTTTACCTGACTTCGCGTCTA 7 577871 0.675684281 2 7 63 1 1.146128036 0 0.714285714 0.857142857 7 0 0 14 4:577860-577890 7 6.5 2415 FBgn0040324 1976.393333 63.49666667 97.38666667 0.003288819 0.102367578 0.06674425 2 2 2 0.25 dme-miR-307a-3p 7mer-A1 GTTGTGA 4 620793 620799 + 4_620793_620799_+ 0.657154424 0.651817869 0.654486146 0.003773475 Eph FBtr0089086|FBtr0089082|FBtr0089084|FBtr0089083 620357|620357|620357|620357 622470|620926|620926|620926 4 + 620680 620838 3'utr Eph FlyBase G56528.1 TATACCTTATATATCAATGTGTACCAATTATTTATTATACGAACAATTTTCAAGCTTATTATTATAAGAGTTTAGAGGCGCTATGATTGCCTTGCTATATTTTACCTTTTTTTGTTGTGATAGAAGTGGAATTAAAGAACTATTCATCTTTATTAGATT 190 620793 0.822310191 33 182 2146 0.960352423 1.639486489 0.383259912 0.163157895 0.299559471 190 5 4 218 4:620680-620838 7 Eph FBtr0089084|FBtr0089083|FBtr0089082|FBtr0089086 620357|620357|620357|620357 620926|620926|620926|622470 GTTGTGA 7mer-A1 dme-miR-307a-3p 4 + 620717 620882 3'utr Eph FlyBase G42688.1 TACGAACAATTTTCAAGCTTATTATTATAAGAGTTTAGAGGCGCTATGATTGCCTTGCTATATTTTACCTTTTTTTGTTGTGATAGAAGTGGAATTAAAGAACTATTCATCTTTATTAGATTATATTTCATGGTTTACTTTGCATAAAATAGTGAAAAACTCAATA 101 620793 0.992723967 25 93 1080 0.925170068 1.531478917 0.31292517 0.326732673 0.537414966 101 8 3 136 4:620717-620882 7 103 2416 FBgn0025936 2044.833333 61.14666667 93.30666667 0.050370853 1.684474488 1.103886825 0 0 0 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 4 649519 649524 - 4_649519_649524_- 0.922182925 0.811230828 0.866706876 0.078454982 gw FBtr0310542 649039 650256 4 - 649483 649548 3'utr gw FlyBase G57001.1 TGTTTCCAGTAAGGAAAAAATACCTGTGTTATATTCATTAGAGGAAGTTGTAATCGTATTACGGTT 29 649517 0.804503373 10 24 239 0.78125 1.397940009 0.09375 0.103448276 0.1875 29 7 0 25 4:649483-649548 6 gw FBtr0310542 649039 650256 TGTGTT 6mer3-8 dme-miR-317-3p 4 - 649443 649549 3'utr gw FlyBase G43060.1 GTGTTTCCAGTAAGGAAAAAATACCTGTGTTATATTCATTAGAGGAAGTTGTAATCGTATTACGGTTTTGCTTTCATCAAAGCATTCCCACCGAAAAAGTTCGGCTA 26 649520 0.982673745 10 23 181 0.852941176 1.462397998 0.323529412 0.269230769 0.441176471 26 5 0 29 4:649443-649549 6 20.5 2417 FBgn0051992 3462.52 78.52666667 120.4066667 0.005920543 0.261057815 0.170256353 -7 -4 -5.5 0.25 dme-miR-1012-3p 6mer3-8 TTGACT 4 649896 649901 - 4_649896_649901_- 0.629874095 0.895011559 0.762442827 0.187480524 gw FBtr0310542 649039 650256 4 - 649819 649957 3'utr gw FlyBase G57003.1 AAAAAAAAAATGGCATGCTTGATGGTTTGCAAACCTTCCTATTTAAGTAAAGTGTTTTGACTCTGGCTCCCAAAGCTTTCCTTGGGAAACGGGAAAAATTCTCTACAGTGTATATGTGCGCATGCAAACTCATTTGGTA 67 649894 0.907529511 21 67 444 1 1.903089987 0.2625 0.164179104 0.3 67 0 0 80 4:649819-649957 6 gw FBtr0310542 649039 650256 TTGACT 6mer3-8 dme-miR-1012-3p 4 - 649796 649913 3'utr gw FlyBase G43062.1 AAGTAAAGTGTTTTGACTCTGGCTCCCAAAGCTTTCCTTGGGAAACGGGAAAAATTCTCTACAGTGTATATGTGCGCATGCAAACTCATTTGGTAAATTACACATTAATAAATATGTA 45 649894 0.982177047 16 42 311 0.927536232 1.806179974 0.202898551 0.422222222 0.623188406 45 5 0 64 4:649796-649913 6 30 2418 FBgn0051992 3462.52 78.52666667 120.4066667 0.00866421 0.382035826 0.249155639 -7 -7 -7 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 4 686100 686106 + 4_686100_686106_+ 0.609552135 0.63471935 0.622135742 0.017795968 CG11360 FBtr0089091|FBtr0310540|FBtr0310539|FBtr0310541 686039|686039|686039|686039 689595|687565|690650|687565 4 + 686071 686152 3'utr CG11360 FlyBase G56563.1 TTGTTAGTTTTTAGTTAGTCGGTTACACATCTAGTCGTGGCTTCCGTGAAGTCTATTAACATTAGTTGAACGTTCAGGGATT 96 686100 0.980332826 14 94 780 0.983606557 1.77815125 0.319672131 0.197916667 0.368852459 96 1 1 120 4:686071-686152 7 CG11360 FBtr0310541|FBtr0310539|FBtr0310540|FBtr0089091 686039|686039|686039|686039 687565|690650|687565|689595 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 4 + 686071 686152 3'utr CG11360 FlyBase G42715.1 TTGTTAGTTTTTAGTTAGTCGGTTACACATCTAGTCGTGGCTTCCGTGAAGTCTATTAACATTAGTTGAACGTTCAGGGATT 63 686100 0.760560493 11 60 483 0.968421053 1.662757832 0.442105263 0.380952381 0.589473684 63 2 1 92 4:686071-686152 7 66 2419 FBgn0039920 1210.836667 29.66666667 45.19333333 0.054507765 2.224719101 1.460392388 0 0 0 0.25 dme-miR-317-3p 6mer3-8 TGTGTT 4 687363 687368 + 4_687363_687368_+ 0.999908737 0.999903831 0.999906284 3.46E-06 CG11360 FBtr0089091|FBtr0310540|FBtr0310539|FBtr0310541 686039|686039|686039|686039 689595|687565|690650|687565 4 + 687347 687383 3'utr CG11360 FlyBase G56564.1 GATATAAAAATTTTTCTGTGTTTTAGGAAGTCATCTA 16 687360 0.697213565 7 14 171 0.9 1.255272505 0.25 0.1875 0.35 16 2 0 18 4:687347-687383 6 CG11360 FBtr0310541|FBtr0310539|FBtr0310540|FBtr0089091 686039|686039|686039|686039 687565|690650|687565|689595 TGTGTT 6mer3-8 dme-miR-317-3p 4 + 687339 687385 3'utr CG11360 FlyBase G42717.1 GAATAGCGGATATAAAAATTTTTCTGTGTTTTAGGAAGTCATCTATA 10 687361 0.988469687 4 8 110 0.727272727 0.602059991 0.454545455 0.1 0.181818182 10 2 1 8 4:687339-687385 6 13 2420 FBgn0039920 1210.836667 29.66666667 45.19333333 0.010736378 0.438202247 0.287653046 3 2 2.5 0.25 dme-miR-2b-2-5p 7mer-A1 TGAAGAA 4 687457 687463 + 4_687457_687463_+ 0.819982401 0.821574169 0.820778285 0.001125573 CG11360 FBtr0089091|FBtr0310540|FBtr0310539|FBtr0310541 686039|686039|686039|686039 689595|687565|690650|687565 4 + 687421 687474 3'utr CG11360 FlyBase G56565.1 AAGTAGAACAAACCCAAATTCTATTGAAGACCTTAGTGAAGAATTTTAATAGTG 11 687454 0.976640334 6 11 74 1 1.146128036 0.071428571 0.272727273 0.428571429 11 0 0 14 4:687421-687474 7 CG11360 FBtr0310541|FBtr0310539|FBtr0310540|FBtr0089091 686039|686039|686039|686039 687565|690650|687565|689595 TGAAGAA 7mer-A1 dme-miR-2b-2-5p 4 + 687424 687470 3'utr CG11360 FlyBase G42718.1 TAGAACAAACCCAAATTCTATTGAAGACCTTAGTGAAGAATTTTAAT 7 687465 0.969190367 6 7 42 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 4:687424-687470 7 7.5 2421 FBgn0039920 1210.836667 29.66666667 45.19333333 0.006194064 0.252808989 0.16595368 3 -8 -2.5 0.25 dme-miR-184-5p 6mer3-8 TGATAA 4 688895 688900 + 4_688895_688900_+ 0.979872594 0.872351512 0.926112053 0.076028899 CG11360 FBtr0089091|FBtr0310539 686039|686039 689595|690650 4 + 688857 688947 3'utr CG11360 FlyBase G56569.1 ACTTTATGATACTAATTCTCTGAAAAATTTAAAACGACTGATAAATTAGCATAAATATTAAGATCGGACACAATATATATATACATAAATA 41 688902 0.791741347 7 35 301 0.840909091 1.568201724 0.045454545 0.073170732 0.136363636 41 7 0 37 4:688857-688947 6 CG11360 FBtr0310539|FBtr0089091 686039|686039 690650|689595 TGATAA 6mer3-8 dme-miR-184-5p 4 + 688804 688914 3'utr CG11360 FlyBase G42720.1 ATTTATTTTTAAACAACAAACATGATGAAAAATATATTGTATCTATAAAGTAAACTTTATGATACTAATTCTCTGAAAAATTTAAAACGACTGATAAATTAGCATAAATAT 29 688884 0.987200865 11 24 211 0.880952381 1.568201724 0.071428571 0.344827586 0.547619048 29 5 0 37 4:688804-688914 6 27 2422 FBgn0039920 1210.836667 29.66666667 45.19333333 0.022298631 0.91011236 0.59743325 -7 11 2 0.25 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 4 689631 689637 + 4_689631_689637_+ 0.615126256 0.618338035 0.616732145 0.002271015 CG11360 FBtr0310539 686039 690650 4 + 689612 689657 3'utr CG11360 FlyBase G56576.1 TTAAATAAAACGGTATCTATGGTGCTTATAACAAACTTGAACCATA 36 689631 0.773776222 2 36 292 1 1.633468456 0 0.194444444 0.325581395 36 0 0 43 4:689612-689657 7 CG11360 FBtr0310539 686039 690650 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 4 + 689615 689651 3'utr CG11360 FlyBase G42727.1 AATAAAACGGTATCTATGGTGCTTATAACAAACTTGA 18 689631 0.723881904 5 17 132 0.964285714 1.431363764 0.071428571 0.388888889 0.607142857 18 1 0 27 4:689615-689651 7 26.5 2423 FBgn0039920 1210.836667 29.66666667 45.19333333 0.021885693 0.893258427 0.586369671 0 0 0 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 4 778798 778804 - 4_778798_778804_- 0.453715923 0.358210888 0.405963405 0.067532233 MED26 FBtr0089253|FBtr0089253|FBtr0089253|FBtr0089254|FBtr0089254|FBtr0089254 778514|778514|778514|778514|778514|778514 778826|778826|778826|778826|778826|778826 4 - 778782 778821 3'utr MED26 FlyBase G57074.1 ACGTTTCTTTCACGCTGTGTGATAACATTTCCGAAACAAA 12 778813 0.953319592 5 11 84 1 1.176091259 0.466666667 0.083333333 0.266666667 12 0 0 15 4:778782-778821 7 MED26 FBtr0089254|FBtr0089254|FBtr0089254|FBtr0089253|FBtr0089253|FBtr0089253 778514|778514|778514|778514|778514|778514 778826|778826|778826|778826|778826|778826 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 4 - 778780 778822 3'utr MED26 FlyBase G43129.1 GACGTTTCTTTCACGCTGTGTGATAACATTTCCGAAACAAAAA 7 778813 0.985128228 5 7 56 1 0.954242509 0.555555556 0.285714286 0.444444444 7 0 0 9 4:778780-778822 7 9 2424 FBgn0039923 1747.52 42.37333333 64.98333333 0.005150156 0.212397734 0.138497051 9 9 9 0.25 dme-miR-283-5p 6mer3-8 TGATAT 4 855396 855401 - 4_855396_855401_- 0.869966101 0.997202025 0.933584063 0.089969368 CG11148 FBtr0300886 853714 855509 4 - 855380 855469 5'utr CG11148 FlyBase G57100.1 AAATTTAAAATGTTATGAACTGCAGAATTGAAATAAACTTAGGTCACAAGATTATGTGCGTTAAACTCTGATATACCTAAATAAATATAT 32 855398 0.750894564 14 29 228 0.930232558 1.124938737 0.186046512 0.28125 0.465116279 32 1 2 40 4:855380-855469 6 CG11148 FBtr0300886 853714 855509 TGATAT 6mer3-8 dme-miR-283-5p 4 - 855379 855432 5'utr CG11148 FlyBase G43148.1 CTTAGGTCACAAGATTATGTGCGTTAAACTCTGATATACCTAAATAAATATATA 12 855400 0.985337594 5 9 89 0.666666667 1.079181246 0.111111111 0.25 0.5 12 6 0 12 4:855379-855432 6 13.5 2425 FBgn0039936 3661.476667 89.62 137.45 0.003687037 0.150636019 0.098217534 -3 -1 -2 0.25 dme-bantam-3p 7mer-m8 TGATCTC X 10077302 10077308 - X_10077302_10077308_- 0.661600694 0.661594879 0.661597786 4.10E-06 ZAP3 FBtr0308584 10077004 10077349 X - 10077244 10077335 5'utr ZAP3 FlyBase G66210.1 GGCAGCAGCAGCGCAGGACCTGATCTTTGATCTCTGAACTCTGAACTCTGAACTCTGAACTCTGAACTCTGAACTCTGAACTCTGAACTCTG 90 10077301 0.988264536 8 82 753 0.902912621 1.366422957 0.233009709 0.133333333 0.242718447 90 7 3 93 X:10077244-10077335 7 ZAP3 FBtr0308584 10077004 10077349 TGATCTC 7mer-m8 dme-bantam-3p X - 10077278 10077335 5'utr ZAP3 FlyBase G49842.1 GGCAGCAGCAGCGCAGGACCTGATCTTTGATCTCTGAACTCTGAACTCTGAACTCTGA 70 10077301 0.986149418 6 66 555 0.944444444 1.309630167 0.175925926 0.4 0.611111111 70 2 4 102 X:10077278-10077335 7 79 2426 FBgn0052685 2208 46.58 71.55666667 0.035778986 1.69600687 1.104020124 -7 -7 -7 0.25 dme-miR-14-3p 6mer3-8 AAGACT X 10264306 10264311 - X_10264306_10264311_- 0.998518735 0.989495935 0.994007335 0.006380083 CG12643 FBtr0071481 10264231 10264840 X - 10264283 10264332 3'utr CG12643 FlyBase G66241.1 TTTAATTTGTATTTAGAGCTAAAGACTACAGTTTATACATTTTATGAATT 22 10264313 0.844661757 7 20 173 0.884615385 1.361727836 0.230769231 0.181818182 0.307692308 22 3 0 23 X:10264283-10264332 6 CG12643 FBtr0071481 10264231 10264840 AAGACT 6mer3-8 dme-miR-14-3p X - 10264282 10264337 3'utr CG12643 FlyBase G49865.1 ACGTATTTAATTTGTATTTAGAGCTAAAGACTACAGTTTATACATTTTATGAATTT 14 10264322 0.82261246 7 13 146 0.9 1.255272505 0.15 0.428571429 0.6 14 2 0 18 X:10264282-10264337 6 17 2427 FBgn0040942 927.6666667 110.47 167.3433333 0.018325548 0.153887933 0.101587555 2 11 6.5 0.25 dme-miR-283-5p 8mer-A1 TGATATTA X 10277097 10277104 - X_10277097_10277104_- 0.487512234 0.470301606 0.47890692 0.012169732 alpha-Man-I FBtr0300512|FBtr0300514|FBtr0299633|FBtr0300513|FBtr0299632|FBtr0300516|FBtr0300515|FBtr0300511|FBtr0331759 10266790|10276053|10276053|10276053|10276616|10276053|10276053|10266790|10276616 10277555|10277555|10277555|10277555|10277555|10277555|10277555|10277555|10277555 X - 10277083 10277189 3'utr alpha-Man-I FlyBase G66252.1 AATCCAAATAGTTGACAGAGGTGGATGGTGGGAAGACCTCAATTTCCATTTAAATGCGAATGACGTAGACGTAGGCAAAAACTCTTGATATTAATTATGATATGATA 53 10277105 0.857335094 9 52 380 0.982758621 1.755874856 0.25862069 0.094339623 0.172413793 53 1 0 57 X:10277083-10277189 8 alpha-Man-I FBtr0300515|FBtr0331759|FBtr0300511|FBtr0299632|FBtr0300516|FBtr0299633|FBtr0300513|FBtr0300512|FBtr0300514 10276053|10276616|10266790|10276616|10276053|10276053|10276053|10266790|10276053 10277555|10277555|10277555|10277555|10277555|10277555|10277555|10277555|10277555 TGATATTA 8mer-A1 dme-miR-283-5p X - 10277086 10277131 3'utr alpha-Man-I FlyBase G49876.1 AATGACGTAGACGTAGGCAAAAACTCTTGATATTAATTATGATATG 21 10277105 0.752342287 5 21 144 1 1.579783597 0.131578947 0.666666667 0.815789474 21 0 0 38 X:10277086-10277131 8 27 2428 FBgn0259170 1144.146667 34.71333333 53.02333333 0.023598373 0.777799117 0.509209782 1 1 1 0.25 dme-bantam-3p 6mer3-8 TGATCT X 10357226 10357231 - X_10357226_10357231_- 0.961761485 0.990166859 0.975964172 0.020085651 l(1)G0289 FBtr0347009|FBtr0071470 10348678|10356827 10357744|10357744 X - 10357030 10357257 5'utr l(1)G0289 FlyBase G66273.2 GAAAGACGACTGGCAACAGCATGAAGTGATCTGTTAAATGTATCTTTTTACCTTTTTTACCGTACCGCCTGCCCATTAGAAGAAAAGCAAAAAAGAGAGAGAGAAAAAAAATGTATAATAATAATGAATAATACCCCAGAAGACAACTCAACTATTGTATAACTCTGAGACCAACGGCTCCCACCAGGCCACGCACACATCCATACCTAAAGCACACACACACACACT 104 10357226 0.965407144 23 93 494 0.880952381 1.744292983 0.158730159 0.201923077 0.341269841 104 14 1 111 X:10357030-10357257 6 l(1)G0289 FBtr0071470|FBtr0347009 10356827|10348678 10357744|10357744 TGATCT 6mer3-8 dme-bantam-3p X - 10357204 10357257 5'utr l(1)G0289 FlyBase G49889.2 GAAAGACGACTGGCAACAGCATGAAGTGATCTGTTAAATGTATCTTTTTACCTT 36 10357226 0.646513221 8 33 224 0.966101695 1.755874856 0.152542373 0.472222222 0.677966102 36 2 0 57 X:10357204-10357257 6 40.5 2429 FBgn0028331 5573.983333 212.8733333 325.9566667 0.007265899 0.190253985 0.124249645 -5 -5 -5 0.25 dme-miR-304-5p 7mer-m8 TGAGATT X 10357396 10357402 - X_10357396_10357402_- 0.619966895 0.619046513 0.619506704 0.000650821 l(1)G0289 FBtr0347009|FBtr0071470|FBtr0347008 10348678|10356827|10357355 10357744|10357744|10357744 X - 10357273 10357411 5'utr-coding l(1)G0289 FlyBase G66274.1 ACTGATTGTTGAGATTTAGCTCAGAACGCTGCCGAAACCGAACAAAACAACAACTAAAAAAAGAAATGAAAGCAATTTAGAAGTGTAAAGTATAGACACAGGACCTGAGTTCTTGACTCCCAGTCCCCCGGAACCAACT 20 10357382 0.959457343 13 19 86 0.909090909 1.301029996 0.045454545 0.1 0.181818182 20 2 0 20 X:10357273-10357411 7 l(1)G0289 FBtr0347008|FBtr0071470|FBtr0347009 10357355|10356827|10348678 10357744|10357744|10357744 TGAGATT 7mer-m8 dme-miR-304-5p X - 10357372 10357417 5'utr l(1)G0289 FlyBase G49891.1 TTTTGAACTGATTGTTGAGATTTAGCTCAGAACGCTGCCGAAACCG 7 10357403 0.948855179 4 7 55 1 0.903089987 0 0.142857143 0.25 7 0 0 8 X:10357372-10357417 7 5.5 2430 FBgn0028331 5573.983333 212.8733333 325.9566667 0.000986727 0.025836961 0.016873409 -20 1 -9.5 0.25 dme-miR-11-3p 7mer-m1 TGTGATG X 10357459 10357465 - X_10357459_10357465_- 0.537608121 0.579304353 0.558456237 0.029483736 l(1)G0289 FBtr0347009|FBtr0071470|FBtr0347008 10348678|10356827|10357355 10357744|10357744|10357744 X - 10357427 10357478 5'utr l(1)G0289 FlyBase G66275.1 ACCCGTCTGTAATTGTGATGTGTTCCATGATGCGTCCACAATGTCAACCAAA 13 10357466 0.986179769 5 12 101 1 1.176091259 0.133333333 0.153846154 0.266666667 13 0 0 15 X:10357427-10357478 7 l(1)G0289 FBtr0347008|FBtr0071470|FBtr0347009 10357355|10356827|10348678 10357744|10357744|10357744 TGTGATG 7mer-m1 dme-miR-11-3p X - 10357439 10357485 5'utr l(1)G0289 FlyBase G49892.1 ATTTGAAACCCGTCTGTAATTGTGATGTGTTCCATGATGCGTCCACA 12 10357466 0.977470675 7 10 88 0.75 1.079181246 0.3125 0.25 0.4375 12 4 0 12 X:10357439-10357485 7 10 2431 FBgn0028331 5573.983333 212.8733333 325.9566667 0.001794049 0.046976293 0.030678925 1 1 1 0.25 dme-miR-33-5p 7mer-A1 AATGCAA X 10463983 10463989 - X_10463983_10463989_- 0.75859391 0.626055032 0.692324471 0.093719155 nocte FBtr0071460|FBtr0332953|FBtr0307488|FBtr0071461 10463816|10461863|10463816|10463816 10464452|10464452|10464452|10464452 X - 10463934 10464009 3'utr nocte FlyBase G66293.1 AAACGAGTAAGGAATACCTAAATGCAAGAAGAAATATTTAACAAAAATGAACAGAATACAACACCATGCCACACCA 12 10463989 0.917418033 6 12 40 1 1.113943352 0.384615385 0.083333333 0.153846154 12 0 0 13 X:10463934-10464009 7 nocte FBtr0071461|FBtr0307488|FBtr0332953|FBtr0071460 10463816|10463816|10461863|10463816 10464452|10464452|10464452|10464452 AATGCAA 7mer-A1 dme-miR-33-5p X - 10463975 10464034 3'utr nocte FlyBase G49902.1 AAGACGAAAGTTAAGAATCAACAGGAAACGAGTAAGGAATACCTAAATGCAAGAAGAAAT 8 10463988 0.801798429 3 7 17 1 1.113943352 0.076923077 0.5 0.692307692 8 0 0 13 X:10463975-10464034 7 7.5 2432 FBgn0261710 3253.496667 44.13333333 68.01666667 0.002305212 0.169939577 0.110267091 0 -1 -0.5 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA X 10482440 10482447 - X_10482440_10482447_- 0.62643532 0.605922387 0.616178853 0.014504811 CG32687 FBtr0336901|FBtr0071458 10482026|10482026 10482859|10482859 X - 10482411 10482474 3'utr CG32687 FlyBase G66325.1 TGTTACTCACACACCTACACAATCTATACCAAAGAAACTCGACTGGCTTTCACTGGGCAAAAAC 44 10482448 0.952694666 7 37 173 0.851851852 0.963787827 0.018518519 0.181818182 0.333333333 44 4 4 46 X:10482411-10482474 8 CG32687 FBtr0071458|FBtr0336901 10482026|10482026 10482859|10482859 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X - 10482405 10482464 3'utr CG32687 FlyBase G49922.1 ACACCTACACAATCTATACCAAAGAAACTCGACTGGCTTTCACTGGGCAAAAACAAATAG 40 10482448 0.949922093 5 34 149 0.821428571 1.185636577 0 0.325 0.517857143 40 8 2 46 X:10482405-10482464 8 40 2433 FBgn0052687 315.3033333 16.03666667 24.44666667 0.126861964 2.494283933 1.63621489 1 1 1 0.25 dme-miR-317-3p 6mer3-8 TGTGTT X 10482485 10482490 - X_10482485_10482490_- 0.935821624 0.770437511 0.853129568 0.116944219 CG32687 FBtr0336901|FBtr0071458 10482026|10482026 10482859|10482859 X - 10482476 10482566 3'utr CG32687 FlyBase G66326.1 CACACGTTACCAATTTGAACTAGTTTGCTAAGTGATTACACGACCTGTTTGCTTGCTCGCCTTGCGTGCCAATTTCTGTGTTTCTGTTTGC 20 10482519 0.697209296 12 19 168 0.913043478 1.322219295 0.173913043 0.15 0.260869565 20 2 0 21 X:10482476-10482566 6 CG32687 FBtr0071458|FBtr0336901 10482026|10482026 10482859|10482859 TGTGTT 6mer3-8 dme-miR-317-3p X - 10482473 10482570 3'utr CG32687 FlyBase G49923.1 TCTTCACACGTTACCAATTTGAACTAGTTTGCTAAGTGATTACACGACCTGTTTGCTTGCTCGCCTTGCGTGCCAATTTCTGTGTTTCTGTTTGCTTG 21 10482493 0.890878522 15 19 185 0.891891892 0.916453949 0.378378378 0.619047619 0.783783784 21 1 3 33 X:10482473-10482570 6 5.5 2434 FBgn0052687 315.3033333 16.03666667 24.44666667 0.01744352 0.342964041 0.224979547 29 3 16 0.25 dme-miR-8-3p 7mer-m8 CAGTATT X 10490625 10490631 - X_10490625_10490631_- 0.539385974 0.546907103 0.543146539 0.005318221 spri FBtr0336902|FBtr0310293|FBtr0310296|FBtr0310292|FBtr0336903|FBtr0112690|FBtr0310295|FBtr0336904|FBtr0310438 10490067|10490345|10490345|10490345|10490067|10490067|10490345|10490345|10490345 10490817|10490817|10490817|10490817|10490817|10490817|10490817|10490817|10490817 X - 10490576 10491026 stop_codon spri FlyBase G66339.1 TGTGCCGCATCATTGCGCACAAGGCGCGCATCACAAATCCGCAGGACTATGCGCTCTTTAAGCTGGTCGATGGCGAGGAGACGCTGCTGACGGACGCAGAGTGTCCGCAGGATGCCCGATTGGCGGCCAAGGGAAAGCATTGCATGCTGGCCTACAAGCGGATCGATGCCAAGATCGCCTGGCCGACCGCCCAGCTGGCAGGACACTGAATCATCAGCTCGGGGATGCACCCGATGCAAATATACGACATACCGCCCCGCCCGCTCTGCCCTTCTTGCTCACTAACCAAGCATATTTGATTAATAATTTATTATTATTACATTAAAATATACTTAGTAGCCTGTAAGTAAAGCTAATTAATGCTAATTAGAAAACATCTAATGTGTACTAAACATCAGTATTGAGTTAAGTGTGTTTTTTTTTCCTGACCCACGGGTCAAGCCCCCTTTTT 466 10490632 0.97491484 64 448 2790 0.961538462 2.021189299 0.166666667 0.135193133 0.261904762 466 17 4 525 X:10490576-10491026 7 spri FBtr0336903|FBtr0112690|FBtr0336904|FBtr0310295|FBtr0310438|FBtr0336902|FBtr0310293|FBtr0310296|FBtr0310292 10490067|10490067|10490345|10490345|10490345|10490067|10490345|10490345|10490345 10490817|10490817|10490817|10490817|10490817|10490817|10490817|10490817|10490817 CAGTATT 7mer-m8 dme-miR-8-3p X - 10490611 10490860 stop_codon spri FlyBase G49934.2 TGCCAAGATCGCCTGGCCGACCGCCCAGCTGGCAGGACACTGAATCATCAGCTCGGGGATGCACCCGATGCAAATATACGACATACCGCCCCGCCCGCTCTGCCCTTCTTGCTCACTAACCAAGCATATTTGATTAATAATTTATTATTATTACATTAAAATATACTTAGTAGCCTGTAAGTAAAGCTAATTAATGCTAATTAGAAAACATCTAATGTGTACTAAACATCAGTATTGAGTTAAGTGTGTT 280 10490632 0.928461665 40 255 1741 0.919047619 1.8876173 0.164285714 0.371428571 0.580952381 280 30 4 386 X:10490611-10490860 7 129 2435 FBgn0085443 1112.173333 25.35666667 38.71333333 0.115989114 5.087419482 3.332185294 1 1 1 0.25 dme-miR-980-3p 7mer-m8 GGCAGCT X 10713644 10713650 - X_10713644_10713650_- 0.657215017 0.657445777 0.657330397 0.0001632 CG32676 FBtr0071503|FBtr0333017 10713113|10711161 10714398|10714398 X - 10713538 10713680 3'utr CG32676 FlyBase G66374.1 ACACGATCACACACACACACACCTGGCTTTGGCAGCTTTATGTTATGTTTAACTTTAATAACCGACGGCGGGCTGAATGAAAATCTGCACCAGCGACTGCGATGTGGCGCTTTAACCTAATTTGCCTTAATAGAAAATCGTTT 137 10713651 0.984223356 17 126 1046 0.924528302 1.69019608 0.044025157 0.116788321 0.238993711 137 10 2 147 X:10713538-10713680 7 CG32676 FBtr0333017|FBtr0071503 10711161|10713113 10714398|10714398 GGCAGCT 7mer-m8 dme-miR-980-3p X - 10713625 10713678 3'utr CG32676 FlyBase G49965.1 ACGATCACACACACACACACCTGGCTTTGGCAGCTTTATGTTATGTTTAACTTT 75 10713651 0.691063469 8 73 588 0.971962617 2.017033339 0.018691589 0.36 0.551401869 75 3 0 104 X:10713625-10713678 7 89 2436 FBgn0052676 977.3866667 21.50333333 32.91666667 0.091059151 4.138893195 2.703797468 1 1 1 0.25 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA X 10748666 10748671 + X_10748666_10748671_+ 0.993908396 0.995819165 0.99486378 0.00135114 ras FBtr0332294|FBtr0332294|FBtr0071494|FBtr0071494|FBtr0071495|FBtr0071495|FBtr0343043|FBtr0343043 10748202|10748202|10748202|10748202|10748202|10748202|10748202|10748202 10749097|10749097|10748806|10748806|10748806|10748806|10748806|10748806 X + 10748615 10748686 3'utr ras FlyBase G60294.1 CTTCAACTATTCGCTATATATATCTAAAGCGCAACGCGTTGGTTGGCCGCTTACTTATTTTGCACGCTATAT 13 10748657 0.989709099 7 12 119 0.928571429 0.812913357 0.357142857 0.076923077 0.142857143 13 0 1 13 X:10748615-10748686 6 ras FBtr0071495|FBtr0071495|FBtr0343043|FBtr0343043|FBtr0332294|FBtr0332294|FBtr0071494|FBtr0071494 10748202|10748202|10748202|10748202|10748202|10748202|10748202|10748202 10748806|10748806|10748806|10748806|10749097|10749097|10748806|10748806 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" X + 10748649 10748685 3'utr ras FlyBase G45573.1 CGCGTTGGTTGGCCGCTTACTTATTTTGCACGCTATA 8 10748666 0.892106905 4 7 64 0.9 0.954242509 0.1 0.25 0.4 8 1 0 9 X:10748649-10748685 6 8.5 2437 FBgn0003204 319.3466667 15.79333333 24.27333333 0.026616843 0.538201773 0.350178522 9 0 4.5 0.25 dme-miR-1003-3p 6mer3-8 ATGTGA X 10748781 10748786 + X_10748781_10748786_+ 0.999815011 0.986072967 0.992943989 0.009717061 ras FBtr0332294|FBtr0071494|FBtr0071495|FBtr0343043 10748202|10748202|10748202|10748202 10749097|10748806|10748806|10748806 X + 10748742 10748797 3'utr ras FlyBase G60295.1 AGCTAGCTTCAAGTTTTAAAACTCTGCCAAACTTATTAAATGTGAACTGAAACTAA 12 10748781 0.958213695 7 12 62 1 1.146128036 0 0.166666667 0.285714286 12 0 0 14 X:10748742-10748797 6 ras FBtr0071495|FBtr0343043|FBtr0332294|FBtr0071494 10748202|10748202|10748202|10748202 10748806|10748806|10749097|10748806 ATGTGA 6mer3-8 dme-miR-1003-3p X + 10748773 10748801 3'utr ras FlyBase G45574.1 CTTATTAAATGTGAACTGAAACTAACTGA 9 10748781 0.634579243 5 9 51 1 1.146128036 0 0.333333333 0.571428571 9 0 0 14 X:10748773-10748801 6 8 2438 FBgn0003204 319.3466667 15.79333333 24.27333333 0.025051146 0.506542845 0.329579786 0 0 0 0.25 dme-miR-92b-3p 6mer3-8 GTGCAA X 10760146 10760151 - X_10760146_10760151_- 0.711068265 0.693489418 0.702278842 0.012430159 Tango5 FBtr0071501|FBtr0346377|FBtr0071499|FBtr0334457|FBtr0071500|FBtr0300569 10760046|10760046|10760046|10760046|10760046|10760046 10760485|10760485|10760485|10760485|10760485|10760485 X - 10760123 10760177 3'utr Tango5 FlyBase G66397.1 TAGTCGCGACTAATGAAAAGCAAATTGTGCAAAAGACAAACCAGCCAGAGTAAGC 42 10760153 0.869114202 4 42 110 1 1.755874856 0.157894737 0.238095238 0.438596491 42 0 0 57 X:10760123-10760177 6 Tango5 FBtr0071500|FBtr0300569|FBtr0071499|FBtr0334457|FBtr0071501|FBtr0346377 10760046|10760046|10760046|10760046|10760046|10760046 10760485|10760485|10760485|10760485|10760485|10760485 GTGCAA 6mer3-8 dme-miR-92b-3p X - 10760126 10760238 3'utr Tango5 FlyBase G49976.1 CCTTAGCAATTTTCCGTGTGAGTTCGTTTAACTAAAGTAACGAAAGTGAGGGAGACGCAGCTAGTCGCGACTAATGAAAAGCAAATTGTGCAAAAGACAAACCAGCCAGAGTA 30 10760153 0.914245324 5 29 102 0.979166667 1.371067862 0.166666667 0.333333333 0.583333333 30 0 1 47 X:10760126-10760238 6 33.5 2439 FBgn0052675 1144.95 61.17 93.45 0.02925892 0.547654079 0.358480471 2 2 2 0.25 dme-bantam-3p 6mer3-8 TGATCT X 10760456 10760461 - X_10760456_10760461_- 0.997696888 0.997804856 0.997750872 7.64E-05 Tango5 FBtr0071501|FBtr0346377|FBtr0071499|FBtr0334457|FBtr0071500|FBtr0300569 10760046|10760046|10760046|10760046|10760046|10760046 10760485|10760485|10760485|10760485|10760485|10760485 X - 10760301 10760481 3'utr Tango5 FlyBase G66399.1 TCAGTGGATCAGTCTTCTGTTGATCTTTTTCCCCAACCCTTGGTTTTCGTTTAAATTATTTTGTATATTGCGGCTTTCGCTCTTAGTCAAATGATGTATCTTATGTGAGTGTGTCGGCGAGAGAAAAGGAGACGGCGTGGAAGCCTGAGGAATTTACCATGTAGACTAGACTAGGGAAAAA 65 10760454 0.982050376 22 63 567 0.948717949 1.86923172 0.256410256 0.138461538 0.282051282 65 4 0 74 X:10760301-10760481 6 Tango5 FBtr0071500|FBtr0300569|FBtr0071499|FBtr0334457|FBtr0071501|FBtr0346377 10760046|10760046|10760046|10760046|10760046|10760046 10760485|10760485|10760485|10760485|10760485|10760485 TGATCT 6mer3-8 dme-bantam-3p X - 10760436 10760482 3'utr Tango5 FlyBase G49978.2 ATCAGTGGATCAGTCTTCTGTTGATCTTTTTCCCCAACCCTTGGTTT 26 10760461 0.6119772 7 23 280 0.875 1.243038049 0.05 0.461538462 0.65 26 4 1 35 X:10760436-10760482 6 27 2440 FBgn0052675 1144.95 61.17 93.45 0.023581816 0.44139284 0.288924559 -7 0 -3.5 0.25 dme-miR-252-5p 6mer3-8 GTACTT X 10771103 10771108 + X_10771103_10771108_+ 0.531051812 0.386127338 0.458589575 0.102477097 BTBD9 FBtr0071497|FBtr0334456 10771071|10771071 10771699|10772154 X + 10771079 10771140 3'utr BTBD9 FlyBase G60303.1 CGCCGCTGCGGCCGATAATGTTTTGTACTTGAAATACTCCTGTGGTCTGTTAGCTGTTAGTC 44 10771127 0.686486621 11 43 388 1 1.740362689 0.236363636 0.159090909 0.327272727 44 0 0 55 X:10771079-10771140 6 BTBD9 FBtr0334456|FBtr0071497 10771071|10771071 10772154|10771699 GTACTT 6mer3-8 dme-miR-252-5p X + 10771082 10771140 3'utr BTBD9 FlyBase G45580.1 CGCTGCGGCCGATAATGTTTTGTACTTGAAATACTCCTGTGGTCTGTTAGCTGTTAGTC 23 10771127 0.988184706 8 23 216 1 1.51851394 0.333333333 0.347826087 0.545454545 23 0 0 33 X:10771082-10771140 6 13 2441 FBgn0030228 130.9633333 5.32 8.203333333 0.099264425 2.443609023 1.584721658 -24 -24 -24 0.25 dme-miR-1008-3p 6mer3-8 AGCTGT X 10771130 10771135 + X_10771130_10771135_+ 0.898211541 0.933527057 0.915869299 0.0249719 BTBD9 FBtr0071497|FBtr0334456 10771071|10771071 10771699|10772154 X + 10771079 10771140 3'utr BTBD9 FlyBase G60303.1 CGCCGCTGCGGCCGATAATGTTTTGTACTTGAAATACTCCTGTGGTCTGTTAGCTGTTAGTC 44 10771127 0.686486621 11 43 388 1 1.740362689 0.236363636 0.159090909 0.327272727 44 0 0 55 X:10771079-10771140 6 BTBD9 FBtr0334456|FBtr0071497 10771071|10771071 10772154|10771699 AGCTGT 6mer3-8 dme-miR-1008-3p X + 10771082 10771140 3'utr BTBD9 FlyBase G45580.1 CGCTGCGGCCGATAATGTTTTGTACTTGAAATACTCCTGTGGTCTGTTAGCTGTTAGTC 23 10771127 0.988184706 8 23 216 1 1.51851394 0.333333333 0.347826087 0.545454545 23 0 0 33 X:10771082-10771140 6 15.5 2442 FBgn0030228 130.9633333 5.32 8.203333333 0.118353738 2.913533835 1.889475823 3 3 3 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 10771183 10771189 + X_10771183_10771189_+ 0.354697858 0.507424371 0.431061115 0.107993944 BTBD9 FBtr0071497|FBtr0334456 10771071|10771071 10771699|10772154 X + 10771149 10771230 3'utr BTBD9 FlyBase G60304.1 TAGTTATATTTTGCAGACCGTGCTGCTCTTGTTATCTAGTCCTTCCCAGTGCCCCAATGCTTGGTGGTTCCAAAACCTGTGC 92 10771191 0.753327288 17 85 889 0.91509434 1.50965048 0.103773585 0.152173913 0.264150943 92 7 2 97 X:10771149-10771230 7 BTBD9 FBtr0334456|FBtr0071497 10771071|10771071 10772154|10771699 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X + 10771158 10771281 3'utr BTBD9 FlyBase G45581.1 TTTGCAGACCGTGCTGCTCTTGTTATCTAGTCCTTCCCAGTGCCCCAATGCTTGGTGGTTCCAAAACCTGTGCATTGCATATTGGTTTTGCGTTATTACCTTCGTTATATACTATATGTATATA 72 10771191 0.742343001 16 63 716 0.903508772 2.012837225 0.254385965 0.361111111 0.596491228 72 11 0 103 X:10771158-10771281 7 62 2443 FBgn0030228 130.9633333 5.32 8.203333333 0.473414951 11.65413534 7.557903291 -8 -8 -8 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 10771321 10771326 + X_10771321_10771326_+ 0.99616306 0.985472792 0.990817926 0.007559184 BTBD9 FBtr0071497|FBtr0071497|FBtr0071497|FBtr0334456|FBtr0334456|FBtr0334456 10771071|10771071|10771071|10771071|10771071|10771071 10771699|10771699|10771699|10772154|10772154|10772154 X + 10771304 10771400 3'utr BTBD9 FlyBase G60306.1 TGTTTTTATAATTTTATTGTGATCCAAAAATAATTCCTTATGTTTGCAAGGCAGCAGAGTTATTTATATAAGCAATATAACTGAATTCTATGCACAC 31 10771319 0.98590632 14 31 258 1 1.591064607 0.025641026 0.193548387 0.358974359 31 0 0 39 X:10771304-10771400 6 BTBD9 FBtr0334456|FBtr0334456|FBtr0334456|FBtr0071497|FBtr0071497|FBtr0071497 10771071|10771071|10771071|10771071|10771071|10771071 10772154|10772154|10772154|10771699|10771699|10771699 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X + 10771309 10771349 3'utr BTBD9 FlyBase G45582.1 TTATAATTTTATTGTGATCCAAAAATAATTCCTTATGTTTG 21 10771320 0.971924366 5 19 169 0.846153846 0.643452676 0.038461538 0.238095238 0.384615385 21 0 4 22 X:10771309-10771349 6 20.5 2444 FBgn0030228 130.9633333 5.32 8.203333333 0.156532363 3.853383459 2.498984153 2 1 1.5 0.25 dme-miR-970-3p 6mer2-7 CTTATG X 10771544 10771549 + X_10771544_10771549_+ 0.775998997 0.999965328 0.887982162 0.158368089 BTBD9 FBtr0071497|FBtr0334456 10771071|10771071 10771699|10772154 X + 10771460 10771567 3'utr BTBD9 FlyBase G60307.1 GCGAACTCGAATGCGATTTCCGAGCAGCTGAACCAAAATTGTATACGATATCCGATCGCATAGTATAAATCTGTACTGTCTAGCCTTATGTCCGGTCCATGTCCTTGT 18 10771550 0.97930014 12 18 122 1 1.342422681 0.181818182 0.222222222 0.363636364 18 0 0 22 X:10771460-10771567 6 BTBD9 FBtr0334456|FBtr0071497 10771071|10771071 10772154|10771699 CTTATG 6mer2-7 dme-miR-970-3p X + 10771510 10771564 3'utr BTBD9 FlyBase G45584.1 TCCGATCGCATAGTATAAATCTGTACTGTCTAGCCTTATGTCCGGTCCATGTCCT 12 10771549 0.738930404 6 9 92 0.8125 0.812913357 0.25 0.25 0.4375 12 2 1 13 X:10771510-10771564 6 8.5 2445 FBgn0030228 130.9633333 5.32 8.203333333 0.064903663 1.597744361 1.036164161 -6 -5 -5.5 0.25 dme-bantam-3p 6mer3-8 TGATCT X 10781452 10781457 - X_10781452_10781457_- 0.839695397 0.825454419 0.832574908 0.010069908 sesB FBtr0346384|FBtr0073423|FBtr0073422|FBtr0073421|FBtr0073424 10780991|10780991|10780991|10780991|10780891 10781620|10781620|10781620|10781620|10781620 X - 10781421 10781490 5'utr sesB FlyBase G66417.1 AGCAATAGCAACAGCAAAGGCATAAGCTAAGTTTGATCTGCAACCAACACCTCTTACCACGAACAACGGC 77 10781458 0.970164408 7 70 427 0.920454545 1.431363764 0.125 0.116883117 0.227272727 77 5 2 81 X:10781421-10781490 6 sesB FBtr0073424|FBtr0346384|FBtr0073423|FBtr0073422|FBtr0073421 10780891|10780991|10780991|10780991|10780991 10781620|10781620|10781620|10781620|10781620 TGATCT 6mer3-8 dme-bantam-3p X - 10781425 10781479 5'utr sesB FlyBase G49996.1 CAGCAAAGGCATAAGCTAAGTTTGATCTGCAACCAACACCTCTTACCACGAACAA 21 10781457 0.910193931 6 21 118 1 1.602059991 0.025 0.476190476 0.725 21 0 0 40 X:10781425-10781479 6 46.5 2446 FBgn0003360 11391.58667 829.71 1277.313333 0.00408196 0.056043678 0.036404537 1 0 0.5 0.25 dme-miR-7-5p 6mer2-7 TCTTCC X 10790076 10790081 - X_10790076_10790081_- 0.535532317 0.634677025 0.585104671 0.07010589 Imp FBtr0073414 10787867 10797068 X - 10790044 10790196 3'utr Imp FlyBase G66433.1 CTATAAAAAAAATAAGCATGCATAACGCTATATAAATTATAAATCGATAAGCCTGGCGTTGCGTAGTCAGTTTATTGCATTTTATTTGGCATATTGAAAAATGATTTCCGTTTTATCTTCCGTTGATATCTTACTACCCATATGGGAATCAAT 39 10790074 0.930515854 19 38 332 0.978723404 1.662757832 0.063829787 0.153846154 0.29787234 39 1 0 46 X:10790044-10790196 6 Imp FBtr0073414 10787867 10797068 TCTTCC 6mer2-7 dme-miR-7-5p X - 10790046 10790093 3'utr Imp FlyBase G50011.1 ATTTCCGTTTTATCTTCCGTTGATATCTTACTACCCATATGGGAATCA 9 10790078 0.87405786 6 9 92 1 1.113943352 0 0.333333333 0.538461538 9 0 0 13 X:10790046-10790093 6 11 2447 FBgn0262735 4183.533333 61.35 94.29666667 0.002629356 0.179299104 0.116653116 -7 -3 -5 0.25 dme-miR-14-3p 7mer-A1 AGACTGA X 10790375 10790381 - X_10790375_10790381_- 0.82303357 0.822974648 0.823004109 4.17E-05 Imp FBtr0073414 10787867 10797068 X - 10790300 10790418 3'utr Imp FlyBase G66434.1 TTCGATTTGTAATAGATTATATACGGTAATCAACTGGAGACTGAGCTACAACATATATTTAGTTACCGTTATATTTATTGCAGAGACACACACACATACATACACTAACACCAACCCCA 745 10790385 0.972319165 25 680 3989 0.913142857 1.94830427 0.138285714 0.139597315 0.267428571 745 68 8 799 X:10790300-10790418 7 Imp FBtr0073414 10787867 10797068 AGACTGA 7mer-A1 dme-miR-14-3p X - 10790333 10790415 3'utr Imp FlyBase G50014.1 GATTTGTAATAGATTATATACGGTAATCAACTGGAGACTGAGCTACAACATATATTTAGTTACCGTTATATTTATTGCAGAGA 546 10790385 0.718578684 21 493 2844 0.923255814 1.945577993 0.197674419 0.41025641 0.625581395 546 58 8 794 X:10790333-10790415 7 555.5 2448 FBgn0262735 4183.533333 61.35 94.29666667 0.132782496 9.054604727 5.890982361 4 4 4 0.25 dme-miR-263a-5p 6mer3-8 GTGCCA X 10792594 10792599 - X_10792594_10792599_- 0.931849638 0.952174135 0.942011886 0.014371592 Imp FBtr0073418|FBtr0073416|FBtr0073414 10792506|10790803|10787867 10797068|10797068|10797068 X - 10792551 10792631 3'utr Imp FlyBase G66439.1 AATGAGAAAAGTACTTTTTTGTGTTGTAAGTTGTGCCAAGTACTGATAACGTTTAAGGTGTGATAAACTCGTTTTTAAATT 36 10792600 0.850214232 12 35 287 0.97826087 1.653212514 0.130434783 0.277777778 0.434782609 36 1 0 45 X:10792551-10792631 6 Imp FBtr0073416|FBtr0073414|FBtr0073418 10790803|10787867|10792506 10797068|10797068|10797068 GTGCCA 6mer3-8 dme-miR-263a-5p X - 10792539 10792623 3'utr Imp FlyBase G50020.1 AAGTACTTTTTTGTGTTGTAAGTTGTGCCAAGTACTGATAACGTTTAAGGTGTGATAAACTCGTTTTTAAATTTAACAACTATTT 34 10792591 0.983330066 10 32 259 0.94 1.672097858 0.34 0.352941176 0.56 34 3 0 47 X:10792539-10792623 6 25 2449 FBgn0262735 4183.533333 61.35 94.29666667 0.00597581 0.407497963 0.265120718 1 -8 -3.5 0.25 dme-miR-282-5p 8mer-A1 AGAGGCTA X 10793075 10793082 - X_10793075_10793082_- 0.637734091 0.637733408 0.637733749 4.95E-07 Imp FBtr0073418|FBtr0073416|FBtr0073414 10792506|10790803|10787867 10797068|10797068|10797068 X - 10793016 10793165 3'utr Imp FlyBase G66440.1 AGAGAACTCAGTTTGAAGAACGAAGAAAGAAAAGCGATTGTGAGTTGTGTGAAAAGCAGAAACGAAATTATTTTTTAGTATTTAGAGGCTATTTTATATCGTTATTAAAGCAGGTAGGCAAGTGAGGCAACGGTTAGGAAAAAAAGGAAG 235 10793083 0.984308871 24 222 1734 0.949090909 2.416640507 0.141818182 0.157446809 0.28 235 14 0 261 X:10793016-10793165 8 Imp FBtr0073416|FBtr0073414|FBtr0073418 10790803|10787867|10792506 10797068|10797068|10797068 AGAGGCTA 8mer-A1 dme-miR-282-5p X - 10793013 10793184 3'utr Imp FlyBase G50021.1 TAATGATAATGATGTAGAAAGAGAACTCAGTTTGAAGAACGAAGAAAGAAAAGCGATTGTGAGTTGTGTGAAAAGCAGAAACGAAATTATTTTTTAGTATTTAGAGGCTATTTTATATCGTTATTAAAGCAGGTAGGCAAGTGAGGCAACGGTTAGGAAAAAAAGGAAGTGA 196 10793083 0.987128278 29 181 1389 0.928082192 1.955848036 0.157534247 0.336734694 0.554794521 196 19 2 271 X:10793013-10793184 8 82.5 2450 FBgn0262735 4183.533333 61.35 94.29666667 0.019720173 1.344743276 0.87489837 1 1 1 0.25 dme-bantam-3p 6mer3-8 TGATCT X 10793754 10793759 - X_10793754_10793759_- 0.753835924 0.785986376 0.76991115 0.022733837 Imp FBtr0073418|FBtr0073416|FBtr0073414 10792506|10790803|10787867 10797068|10797068|10797068 X - 10793746 10793784 3'utr Imp FlyBase G66442.1 AAGAATGTTGCTGGGCATTTACCATTGATCTTTATATAC 10 10793760 0.612909663 4 7 108 0.75 0.954242509 0.25 0.2 0.333333333 10 3 0 9 X:10793746-10793784 6 Imp FBtr0073416|FBtr0073414|FBtr0073418 10790803|10787867|10792506 10797068|10797068|10797068 TGATCT 6mer3-8 dme-bantam-3p X - 10793740 10793781 3'utr Imp FlyBase G50024.1 AATGTTGCTGGGCATTTACCATTGATCTTTATATACGAGTAT 7 10793760 0.751734379 4 7 78 1 0.954242509 0.222222222 0.285714286 0.444444444 7 0 0 9 X:10793740-10793781 6 8 2451 FBgn0262735 4183.533333 61.35 94.29666667 0.001912259 0.130399348 0.08483863 1 1 1 0.25 dme-miR-276a-3p 6mer3-8 AGTTCC X 10833255 10833260 - X_10833255_10833260_- 0.823940115 0.77009256 0.797016337 0.038075932 sbr FBtr0073411 10832750 10833508 X - 10833234 10833286 3'utr sbr FlyBase G66468.1 TCGATAGATTAGTTTAGCTCTCTTTAAGTTCCGTCCGCAGATCCGCTGGTCTA 10 10833258 0.775412459 4 10 84 1 1.079181246 0.083333333 0.2 0.333333333 10 0 0 12 X:10833234-10833286 6 sbr FBtr0073411 10832750 10833508 AGTTCC 6mer3-8 dme-miR-276a-3p X - 10833235 10833316 3'utr sbr FlyBase G50045.1 CGGGCAATGTGCATCAACGATCACAGTTCTTCGATAGATTAGTTTAGCTCTCTTTAAGTTCCGTCCGCAGATCCGCTGGTCT 11 10833258 0.987117343 5 9 75 0.8 1.079181246 0.133333333 0.272727273 0.466666667 11 3 0 12 X:10833235-10833316 6 7.5 2452 FBgn0003321 977.3433333 36.05 55.19 0.007673864 0.208044383 0.135894184 -2 -2 -2 0.25 dme-miR-79-3p 8mer-A1 TAGCTTTA X 10862879 10862886 + X_10862879_10862886_+ 0.620429998 0.622823249 0.621626623 0.001692248 CG2186 FBtr0073381|FBtr0332961 10862782|10862782 10863580|10866246 X + 10862817 10862980 3'utr CG2186 FlyBase G60340.1 TATAACTATTATCGATTATAGATGTACGACGATGATGGGGAGTAGTGCAGTAAGCAGTACTTTAGCTTTAAGGTAAAAAGTTATAAATAGTTGAGCTTTCTTTATAAATAGCGGATTATACATATATCTAGATGTCATGTAATTGGTGGGTGTGCGTGAGGGTC 22 10862878 0.98390638 12 21 179 0.966666667 1.161368002 0.1 0.272727273 0.466666667 22 0 1 29 X:10862817-10862980 8 CG2186 FBtr0073381|FBtr0332961 10862782|10862782 10863580|10866246 TAGCTTTA 8mer-A1 dme-miR-79-3p X + 10862810 10862944 3'utr CG2186 FlyBase G45607.1 AGTTTTCTATAACTATTATCGATTATAGATGTACGACGATGATGGGGAGTAGTGCAGTAAGCAGTACTTTAGCTTTAAGGTAAAAAGTTATAAATAGTTGAGCTTTCTTTATAAATAGCGGATTATACATATATC 27 10862878 0.993591984 11 26 200 1 1.643452676 0.386363636 0.481481481 0.681818182 27 0 0 44 X:10862810-10862944 8 10 2453 FBgn0030243 1064.863333 20.89333333 32.09 0.009390876 0.47862157 0.311623559 1 1 1 0.25 dme-miR-317-3p 7mer-m8 TGTGTTC X 10863491 10863497 + X_10863491_10863497_+ 0.61064442 0.617394028 0.614019224 0.004772688 CG2186 FBtr0073381|FBtr0332961 10862782|10862782 10863580|10866246 X + 10863438 10863545 3'utr CG2186 FlyBase G60345.1 ATTTTATACATTGTGCCCCGTTGATTGTAAATGAAATTTATTGTCTGTCCTGTTGTGTTCTTTGTAACTACTATAAACCACATACGAAACTATGTTAGCTTGTGAACT 88 10863490 0.790500796 16 87 1048 0.99047619 2.017033339 0.295238095 0.113636364 0.257142857 88 1 0 104 X:10863438-10863545 7 CG2186 FBtr0073381|FBtr0332961 10862782|10862782 10863580|10866246 TGTGTTC 7mer-m8 dme-miR-317-3p X + 10863443 10863512 3'utr CG2186 FlyBase G45611.1 ATACATTGTGCCCCGTTGATTGTAAATGAAATTTATTGTCTGTCCTGTTGTGTTCTTTGTAACTACTATA 49 10863490 0.992978706 6 49 582 1 1.838849091 0.231884058 0.285714286 0.492753623 49 0 0 69 X:10863443-10863512 7 61 2454 FBgn0030243 1064.863333 20.89333333 32.09 0.057284346 2.919591576 1.900903708 1 1 1 0.25 dme-miR-304-5p 6mer2-7 GAGATT X 10864011 10864016 + X_10864011_10864016_+ 0.973130904 0.871242681 0.922186792 0.072045837 CG2186 FBtr0332961 10862782 10866246 X + 10863981 10864040 3'utr CG2186 FlyBase G60349.1 TCGAAGATAATGCGAAATGCCTAGACTAAAGAGATTGTTAAATTATTGCCACTCCCGCTC 7 10864017 0.986355677 5 5 40 0.75 0.77815125 0.25 0.142857143 0.25 7 2 0 6 X:10863981-10864040 6 CG2186 FBtr0332961 10862782 10866246 GAGATT 6mer2-7 dme-miR-304-5p X + 10863978 10864037 3'utr CG2186 FlyBase G45613.1 GCGTCGAAGATAATGCGAAATGCCTAGACTAAAGAGATTGTTAAATTATTGCCACTCCCG 8 10864017 0.971664377 4 6 41 0.933333333 1.146128036 0.466666667 0.625 0.8 8 1 0 14 X:10863978-10864037 6 5.5 2455 FBgn0030243 1064.863333 20.89333333 32.09 0.005164982 0.263241863 0.171392957 -6 -6 -6 0.25 dme-miR-79-3p 7mer-m8 TAGCTTT X 10864685 10864691 + X_10864685_10864691_+ 0.590717541 0.599694371 0.595205956 0.006347627 CG2186 FBtr0332961 10862782 10866246 X + 10864577 10864735 3'utr CG2186 FlyBase G60353.1 AATATGATATAATATATGGATTAATAAAAACCAATTATACCACGTGCACACATAAAAGCGTGCGGCAGCATAACTGTATAAACATCTAAAAATTATTCCAAGTGATTTTAGCTTTTTAAGAACCAAGTCGAAACAAACTGAACACTCGTAGTGGAAAAC 56 10864683 0.989285765 14 56 530 1 1.819543936 0.151515152 0.160714286 0.287878788 56 0 0 66 X:10864577-10864735 7 CG2186 FBtr0332961 10862782 10866246 TAGCTTT 7mer-m8 dme-miR-79-3p X + 10864661 10864735 3'utr CG2186 FlyBase G45616.1 TCTAAAAATTATTCCAAGTGATTTTAGCTTTTTAAGAACCAAGTCGAAACAAACTGAACACTCGTAGTGGAAAAC 37 10864683 0.99987835 6 35 353 0.944444444 1.707570176 0.12962963 0.378378378 0.574074074 37 3 0 51 X:10864661-10864735 7 38 2456 FBgn0030243 1064.863333 20.89333333 32.09 0.035685331 1.818761966 1.184169523 2 2 2 0.25 dme-miR-308-3p 8mer-m1 CTGTGATT X 10864799 10864806 + X_10864799_10864806_+ 0.383928226 0.385370549 0.384649388 0.00101986 CG2186 FBtr0332961 10862782 10866246 X + 10864760 10864823 3'utr CG2186 FlyBase G60354.1 AAACAAAAATTGAAATGATTCCAATTTGCAAATCCGAGTCTGTGATTATTTTTATATTATTCTT 44 10864798 0.988869372 12 44 416 1 1.763427994 0 0.25 0.431034483 44 0 0 58 X:10864760-10864823 8 CG2186 FBtr0332961 10862782 10866246 CTGTGATT 8mer-m1 dme-miR-308-3p X + 10864776 10864815 3'utr CG2186 FlyBase G45617.1 GATTCCAATTTGCAAATCCGAGTCTGTGATTATTTTTATA 32 10864798 0.75912235 10 29 304 0.872340426 1.311753861 0 0.28125 0.510638298 32 5 1 41 X:10864776-10864815 8 36 2457 FBgn0030243 1064.863333 20.89333333 32.09 0.033807155 1.723037652 1.121844811 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 10865093 10865099 + X_10865093_10865099_+ 0.725228027 0.730497639 0.727862833 0.00372617 CG2186 FBtr0332961|FBtr0332961|FBtr0332961 10862782|10862782|10862782 10866246|10866246|10866246 X + 10865055 10865119 3'utr CG2186 FlyBase G60355.1 TCAAATAGATTAGATTACTTGGGGATTCGTCATTTATGTGTGATATACCATATATATGTATAGTT 36 10865091 0.989506363 6 29 394 0.80952381 1.531478917 0.047619048 0.138888889 0.261904762 36 8 0 34 X:10865055-10865119 7 CG2186 FBtr0332961|FBtr0332961|FBtr0332961 10862782|10862782|10862782 10866246|10866246|10866246 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X + 10865016 10865113 3'utr CG2186 FlyBase G45618.1 AAATCGGTTTGCGATCAGGCTCCAACGCTCCATTCTCAGTCAAATAGATTAGATTACTTGGGGATTCGTCATTTATGTGTGATATACCATATATATGT 22 10865090 0.989701717 7 21 206 0.96969697 1.505149978 0.03030303 0.272727273 0.515151515 22 1 0 32 X:10865016-10865113 7 26.5 2458 FBgn0030243 1064.863333 20.89333333 32.09 0.024885823 1.26834716 0.825802431 2 3 2.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 11094392 11094399 + X_11094392_11094399_+ 0.630009126 0.629999655 0.63000439 6.65E-06 CG2061 FBtr0073429|FBtr0332383|FBtr0073431 11094303|11094303|11094303 11094660|11094947|11094660 X + 11094366 11094448 3'utr CG2061 FlyBase G60372.1 TCGAATCAGGGAGAGTTATCATCATTTCTAGTCACTTGTTTGCCGATTTTTCTCTCATTGTTGCCTTTGCGTTCACCCAGCGA 209 11094391 0.794624299 12 200 2075 0.958174905 1.799340549 0.406844106 0.220095694 0.380228137 209 8 3 252 X:11094366-11094448 8 CG2061 FBtr0073431|FBtr0073429|FBtr0332383 11094303|11094303|11094303 11094660|11094660|11094947 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X + 11094366 11094414 3'utr CG2061 FlyBase G45629.1 TCGAATCAGGGAGAGTTATCATCATTTCTAGTCACTTGTTTGCCGATTT 126 11094391 0.961042815 6 123 1220 0.97740113 2.238046103 0.463276836 0.349206349 0.536723164 126 4 0 173 X:11094366-11094414 8 164 2459 FBgn0027498 98.96 5.68 8.753333333 1.657235247 28.87323944 18.73571973 1 1 1 0.25 dme-miR-2a-2-5p 8mer-A1 TGATGAGA X 11111872 11111879 + X_11111872_11111879_+ 0.596078627 0.600231833 0.59815523 0.002936756 Hsp60 FBtr0073434|FBtr0073435 11111824|11111824 11112308|11112308 X + 11111831 11111914 3'utr Hsp60 FlyBase G60388.1 TGCCACTGACTGGTCGACAGCCGGAGAGGGGGAGGGAGATGTGATGAGAACCGAAACCAGCATACTGTTTAAGTCACGATGTGG 64 11111875 0.887892394 7 60 171 0.941176471 1.329058719 0.25 0.0625 0.117647059 64 2 2 64 X:11111831-11111914 8 Hsp60 FBtr0073435|FBtr0073434 11111824|11111824 11112308|11112308 TGATGAGA 8mer-A1 dme-miR-2a-2-5p X + 11111831 11111915 3'utr Hsp60 FlyBase G45641.1 TGCCACTGACTGGTCGACAGCCGGAGAGGGGGAGGGAGATGTGATGAGAACCGAAACCAGCATACTGTTTAAGTCACGATGTGGA 50 11111874 0.889051715 7 49 142 0.985915493 1.84509804 0.281690141 0.26 0.478873239 50 1 0 70 X:11111831-11111915 8 45 2460 FBgn0015245 2987.88 154.9833333 236.8566667 0.015060846 0.290353801 0.189988319 -3 -2 -2.5 0.25 dme-miR-263a-5p 7mer-m1 TGCCATT X 11112690 11112696 - X_11112690_11112696_- 0.738080545 0.655166407 0.696623476 0.058629122 CG11122 FBtr0073481 11112393 11112850 X - 11112653 11112722 3'utr CG11122 FlyBase G66526.1 ATCGCCGCCATCGATCACATACGTACTGCCATTGTGTCATCGTTAATCGTTAACGCCGGCGCCAGGAGGG 29 11112691 0.980362346 6 28 198 0.974358974 1.278753601 0.076923077 0.172413793 0.384615385 29 0 1 38 X:11112653-11112722 7 CG11122 FBtr0073481 11112393 11112850 TGCCATT 7mer-m1 dme-miR-263a-5p X - 11112643 11112720 3'utr CG11122 FlyBase G50089.1 CGCCGCCATCGATCACATACGTACTGCCATTGTGTCATCGTTAATCGTTAACGCCGGCGCCAGGAGGGGATCAGGATC 14 11112691 0.97753838 4 14 95 1 1.477121255 0.2 0.714285714 0.866666667 14 0 0 30 X:11112643-11112720 7 20 2461 FBgn0030266 709.6566667 7.043333333 10.83 0.028182642 2.8395646 1.846722068 -5 -5 -5 0.25 dme-miR-277-3p 7mer-m8 TGCATTT X 11129983 11129989 - X_11129983_11129989_- 0.612831406 0.580800226 0.596815816 0.022649479 Klp10A FBtr0346270|FBtr0073479|FBtr0073477|FBtr0073478 11129360|11129360|11129360|11129360 11130979|11130979|11130979|11130979 X - 11129964 11130006 3'utr Klp10A FlyBase G66557.1 ATGATTTAGAGATGATTTGCATTTCATTTTGTACTAATATTTA 8 11129990 0.990776445 3 7 78 1 1 0.1 0.25 0.4 8 0 0 10 X:11129964-11130006 7 Klp10A FBtr0073478|FBtr0073477|FBtr0346270|FBtr0073479 11129360|11129360|11129360|11129360 11130979|11130979|11130979|11130979 TGCATTT 7mer-m8 dme-miR-277-3p X - 11129955 11130011 3'utr Klp10A FlyBase G50110.1 TTATTATGATTTAGAGATGATTTGCATTTCATTTTGTACTAATATTTATTGCATATA 6 11129990 0.990042897 3 6 63 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 X:11129955-11130011 7 5.5 2462 FBgn0030268 2688.253333 72.09666667 110.64 0.002045938 0.076286467 0.049710774 1 1 1 0.25 dme-miR-1008-3p 6mer3-8 AGCTGT X 11163566 11163571 + X_11163566_11163571_+ 0.792526585 0.812449462 0.802488023 0.014087618 Dlic FBtr0073444|FBtr0073443 11162784|11162784 11164670|11164670 X + 11163554 11163658 3'utr Dlic FlyBase G60427.1 AATTATTTAATGAGCTGTAAAATGTAATTAACAAATGGCAGACAAACGAGAGATTCGAACACGATTCAAGATCCCTGCGATGATGAGTATGGCTTGCTACTAGCC 13 11163564 0.967206905 9 12 64 1 1.230448921 0.470588235 0.230769231 0.411764706 13 0 0 17 X:11163554-11163658 6 Dlic FBtr0073444|FBtr0073443 11162784|11162784 11164670|11164670 AGCTGT 6mer3-8 dme-miR-1008-3p X + 11163540 11163577 3'utr Dlic FlyBase G45672.1 ACATTTGTATAATAAATTATTTAATGAGCTGTAAAATG 6 11163564 0.977534853 2 6 45 1 1.041392685 0.636363636 0.666666667 0.818181818 6 0 0 11 X:11163540-11163577 6 6 2463 FBgn0030276 2529.746667 84.58333333 130.21 0.002371779 0.070935961 0.04607941 2 2 2 0.25 dme-miR-283-5p 8mer-m1 TGATATTT X 11333669 11333676 + X_11333669_11333676_+ 0.553120795 0.433935216 0.493528006 0.084276946 CG1657 FBtr0073448 11333527 11334071 X + 11333648 11333684 3'utr CG1657 FlyBase G60461.1 ATGTATATGTATGTCTGTGTCTGATATTTGTGTAAAA 7 11333668 0.614516572 5 7 65 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 X:11333648-11333684 8 CG1657 FBtr0073448 11333527 11334071 TGATATTT 8mer-m1 dme-miR-283-5p X + 11333603 11333677 3'utr CG1657 FlyBase G45699.1 TCCCATCCCACTCTCTCCTCCAGTCGATATTTTCCATATTTATATATGTATATGTATGTCTGTGTCTGATATTTG 10 11333663 0.991519419 6 10 108 1 1.278753601 0.157894737 0.7 0.842105263 10 0 0 19 X:11333603-11333677 8 7 2464 FBgn0030286 666.2266667 13.88 21.43333333 0.010506935 0.504322767 0.32659409 1 6 3.5 0.25 dme-miR-8-3p 7mer-A1 AGTATTA X 11334360 11334366 - X_11334360_11334366_- 0.821193314 0.82205505 0.821624182 0.000609385 Kap3 FBtr0343145|FBtr0289956|FBtr0289954|FBtr0289955|FBtr0343146 11334185|11334185|11334185|11334185|11334185 11334788|11334788|11334788|11334788|11334788 X - 11334337 11334428 3'utr Kap3 FlyBase G66610.1 ATGGCTTAGCTTCCACTTTGGTTGTTCGCAACGCAATTACTGTGCAATAATCTCTCACTTAAAGTATTACGTCGAACGTTTTTAGTTGTACT 11 11334370 0.990975075 9 10 91 0.909090909 1 0.272727273 0 0 11 1 0 10 X:11334337-11334428 7 Kap3 FBtr0289956|FBtr0289954|FBtr0289955|FBtr0343146|FBtr0343145 11334185|11334185|11334185|11334185|11334185 11334788|11334788|11334788|11334788|11334788 AGTATTA 7mer-A1 dme-miR-8-3p X - 11334350 11334428 3'utr Kap3 FlyBase G50154.1 ATGGCTTAGCTTCCACTTTGGTTGTTCGCAACGCAATTACTGTGCAATAATCTCTCACTTAAAGTATTACGTCGAACGT 10 11334369 0.980381356 6 9 83 0.909090909 1 0.090909091 0.1 0.181818182 10 1 0 10 X:11334350-11334428 7 7 2465 FBgn0028421 198.6666667 6.38 9.766666667 0.035234899 1.097178683 0.716723549 4 3 3.5 0.25 dme-miR-1007-3p 7mer-m8 TGAGCTT X 11344132 11344138 + X_11344132_11344138_+ 0.590329653 0.576176039 0.583252846 0.010008177 CG34348 FBtr0112557 11344094 11344734 X + 11344108 11344204 3'utr CG34348 FlyBase G60467.2 TAGCGCATAGAGAGATTAACAGATTGAGCTTGGTCCTGGCCATACAAAACAGACTTTGTTCCATGTACTTGATGACAGTACTTCATGGCAGCGCCAT 80 11344124 0.966840782 16 56 537 0.714285714 0.967815317 0.120879121 0.125 0.230769231 80 20 6 65 X:11344108-11344204 7 CG34348 FBtr0112557 11344094 11344734 TGAGCTT 7mer-m8 dme-miR-1007-3p X + 11344088 11344222 stop_codon CG34348 FlyBase G45703.1 AGGAGTGATCCATGATCGTTTAGCGCATAGAGAGATTAACAGATTGAGCTTGGTCCTGGCCATACAAAACAGACTTTGTTCCATGTACTTGATGACAGTACTTCATGGCAGCGCCATATATGCATATATCTCACT 59 11344124 0.986234546 14 42 388 0.727272727 1.158362492 0.070707071 0.423728814 0.656565657 59 23 4 72 X:11344088-11344222 7 50 2466 FBgn0085377 250.7633333 13.94666667 21.41 0.199391192 3.585086042 2.33535731 8 8 8 0.25 dme-miR-33-5p 7mer-A1 AATGCAA X 11344532 11344538 + X_11344532_11344538_+ 0.75652558 0.757100504 0.756813042 0.000406516 CG34348 FBtr0112557 11344094 11344734 X + 11344470 11344542 3'utr CG34348 FlyBase G60469.1 AGGCACATTAAGCAATTATGTCGCTAGTTTTCCATTAGGTATATCATTTTTGTACCTTTTTTAATGCAACAGT 5 11344529 0.988405962 5 5 58 1 0.698970004 0.2 0 0 5 0 0 5 X:11344470-11344542 7 CG34348 FBtr0112557 11344094 11344734 AATGCAA 7mer-A1 dme-miR-33-5p X + 11344510 11344542 3'utr CG34348 FlyBase G45705.1 ATATCATTTTTGTACCTTTTTTAATGCAACAGT 4 11344529 0.985609229 4 4 34 1 0.698970004 0.2 0.25 0.4 4 0 0 5 X:11344510-11344542 7 3 2467 FBgn0085377 250.7633333 13.94666667 21.41 0.011963472 0.215105163 0.140121439 3 3 3 0.25 dme-miR-317-3p 6mer3-8 TGTGTT X 11358250 11358255 + X_11358250_11358255_+ 0.940169653 0.73728256 0.838726107 0.143462844 dsh FBtr0073454 11358224 11358724 X + 11358158 11358271 stop_codon dsh FlyBase G60497.1 GAGGCGGTGGCGGTGGCGGCAACAATACCAACGATCAGGACGTATCCGTATTTAATTACGTATTGTAGAAACCTTTCTTTTTGCAATCAAATTGTGTTTTTAATTAATTAAATT 20 11358249 0.986814766 9 18 158 0.956521739 1.342422681 0.043478261 0.1 0.217391304 20 1 0 22 X:11358158-11358271 6 dsh FBtr0073454 11358224 11358724 TGTGTT 6mer3-8 dme-miR-317-3p X + 11358233 11358273 3'utr dsh FlyBase G45723.1 TCTTTTTGCAATCAAATTGTGTTTTTAATTAATTAAATTAA 5 11358249 0.975905947 2 5 73 1 0.903089987 0 0.6 0.75 5 0 0 8 X:11358233-11358273 6 7 2468 FBgn0000499 392 16.79 25.82333333 0.017857143 0.41691483 0.271072673 1 1 1 0.25 dme-miR-14-3p 6mer3-8 AAGACT X 11360437 11360442 + X_11360437_11360442_+ 0.954005468 0.923255977 0.938630723 0.02174318 Pa1 FBtr0073456 11359762 11360929 X + 11360397 11360634 3'utr Pa1 FlyBase G60505.1 TGACAATATTCTTGATAGTATTGTCCGAAACCGACGTTTGAAGACTAGAATATAGAATATAGGATAGAACGGATGTAAATTTAAATCCAATGCGAGTAAAGCAGATAACAAGATAGGCAACTGTAGATCAGTCAACTTCTGTACATAAAAGAACTGAATTTCACTAATAGCTGTTAAAACTAGAATATAGAATGTAGGATAGAACGGATGTACATTTAAATCCAAGATGAGTAAGATA 110 11360442 0.975511654 24 105 612 0.96031746 2.08278537 0.142857143 0.127272727 0.238095238 110 5 0 121 X:11360397-11360634 6 Pa1 FBtr0073456 11359762 11360929 AAGACT 6mer3-8 dme-miR-14-3p X + 11360409 11360467 3'utr Pa1 FlyBase G45732.1 TGATAGTATTGTCCGAAACCGACGTTTGAAGACTAGAATATAGAATATAGGATAGAACG 45 11360433 0.747640826 5 42 253 0.971014493 1.826074803 0.086956522 0.4 0.608695652 45 2 0 67 X:11360409-11360467 6 50.5 2469 FBgn0030294 242.3333333 18.24 28.02 0.208390646 2.768640351 1.802284083 -5 4 -0.5 0.25 dme-miR-1007-3p 6mer3-8 TGAGCT X 11360735 11360740 + X_11360735_11360740_+ 0.931804214 0.819602133 0.875703173 0.079338866 Pa1 FBtr0073456 11359762 11360929 X + 11360661 11360789 3'utr Pa1 FlyBase G60506.1 AGTCAACTTCCGTACATACAACTAATACGAAATGAATCAGCACAGTTGCCCTACTAAACAATATCAACTTCTCATGAGCTAAAAATAGACTACTAAGAATTATGATAAGCCAAGGTTGTTCCGGAAAAC 19 11360735 0.976716669 9 16 97 0.85 1.230448921 0.15 0.052631579 0.1 19 3 0 17 X:11360661-11360789 6 Pa1 FBtr0073456 11359762 11360929 TGAGCT 6mer3-8 dme-miR-1007-3p X + 11360701 11360764 3'utr Pa1 FlyBase G45734.1 CACAGTTGCCCTACTAAACAATATCAACTTCTCATGAGCTAAAAATAGACTACTAAGAATTATG 16 11360746 0.964495768 6 15 83 0.95 1.278753601 0.1 0.25 0.4 16 1 0 19 X:11360701-11360764 6 14 2470 FBgn0030294 242.3333333 18.24 28.02 0.057771664 0.76754386 0.499643112 0 -11 -5.5 0.25 dme-miR-317-3p 6mer3-8 TGTGTT X 11361418 11361423 - X_11361418_11361423_- 0.966742854 0.969608566 0.96817571 0.002026356 hop FBtr0073457 11360928 11361814 X - 11361402 11361456 3'utr hop FlyBase G66628.1 ATGTATATGTATAAACAAATTCTCAACCTACTTTGTGTTATACATTTTAGACAAC 30 11361425 0.728777607 6 29 268 0.970588235 1.51851394 0 0.133333333 0.235294118 30 1 0 33 X:11361402-11361456 6 hop FBtr0073457 11360928 11361814 TGTGTT 6mer3-8 dme-miR-317-3p X - 11361365 11361450 3'utr hop FlyBase G50168.1 ATGTATAAACAAATTCTCAACCTACTTTGTGTTATACATTTTAGACAACTTTGTTAAATATTGTTAAGCTTGAGCTTCAATTTTTT 22 11361425 0.983430569 5 22 173 1 1.556302501 0.055555556 0.454545455 0.666666667 22 0 0 36 X:11361365-11361450 6 15 2471 FBgn0004864 288.6033333 6.79 10.3 0.051974452 2.209131075 1.45631068 2 2 2 0.25 dme-miR-317-3p 7mer-A1 GTGTTCA X 11406703 11406709 + X_11406703_11406709_+ 0.822157971 0.772219528 0.79718875 0.035311852 dlg1 FBtr0330390|FBtr0301289|FBtr0073485|FBtr0112813|FBtr0073486|FBtr0073488|FBtr0308088|FBtr0073489|FBtr0073487|FBtr0308089|FBtr0333261|FBtr0112812|FBtr0073490|FBtr0333262 11406300|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177 11407751|11407751|11407751|11409776|11407751|11407751|11407985|11407751|11407751|11408338|11408338|11409776|11407751|11409776 X + 11406681 11406762 3'utr dlg1 FlyBase G60525.1 TGGCATATGAGATGAGATATGGGTGTTCAAACGGTAGCGGACAAAGGTGTATAGTTTTTAGTTAGAACAAAGTTGGATATAA 8 11406700 0.981467526 6 8 57 1 0.954242509 0.111111111 0.125 0.222222222 8 0 0 9 X:11406681-11406762 7 dlg1 FBtr0073487|FBtr0333261|FBtr0112812|FBtr0073490|FBtr0308089|FBtr0333262|FBtr0073489|FBtr0073485|FBtr0301289|FBtr0073486|FBtr0112813|FBtr0073488|FBtr0330390|FBtr0308088 11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406300|11406177 11407751|11408338|11409776|11407751|11408338|11409776|11407751|11407751|11407751|11407751|11409776|11407751|11407751|11407985 GTGTTCA 7mer-A1 dme-miR-317-3p X + 11406675 11406762 3'utr dlg1 FlyBase G45739.1 GGCATATGGCATATGAGATGAGATATGGGTGTTCAAACGGTAGCGGACAAAGGTGTATAGTTTTTAGTTAGAACAAAGTTGGATATAA 13 11406701 0.98017639 8 11 84 0.823529412 1.146128036 0.117647059 0.230769231 0.411764706 13 3 0 14 X:11406675-11406762 7 3.5 2472 FBgn0001624 7812.856667 177.1533333 273.5833333 0.00044798 0.019756896 0.012793177 3 2 2.5 0.25 dme-miR-13b-2-5p 7mer-m1 TTGACGC X 11407329 11407335 + X_11407329_11407335_+ 0.542654212 0.503976623 0.523315418 0.027349193 dlg1 FBtr0330390|FBtr0301289|FBtr0073485|FBtr0112813|FBtr0073486|FBtr0073488|FBtr0308088|FBtr0073489|FBtr0073487|FBtr0308089|FBtr0333261|FBtr0112812|FBtr0073490|FBtr0333262 11406300|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177 11407751|11407751|11407751|11409776|11407751|11407751|11407985|11407751|11407751|11408338|11408338|11409776|11407751|11409776 X + 11407318 11407377 3'utr dlg1 FlyBase G60531.1 ATTGATGAATATTGACGCTAATAACGATGGAGATGATGAAAAACGTTGGTGCATTTGTTG 22 11407329 0.767864433 6 20 125 0.935483871 1.462397998 0.322580645 0.227272727 0.451612903 22 2 0 29 X:11407318-11407377 7 dlg1 FBtr0073487|FBtr0333261|FBtr0112812|FBtr0073490|FBtr0308089|FBtr0333262|FBtr0073489|FBtr0073485|FBtr0301289|FBtr0073486|FBtr0112813|FBtr0073488|FBtr0330390|FBtr0308088 11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406300|11406177 11407751|11408338|11409776|11407751|11408338|11409776|11407751|11407751|11407751|11407751|11409776|11407751|11407751|11407985 TTGACGC 7mer-m1 dme-miR-13b-2-5p X + 11407309 11407423 3'utr dlg1 FlyBase G45743.1 TAAATATATATTGATGAATATTGACGCTAATAACGATGGAGATGATGAAAAACGTTGGTGCATTTGTTGTTAGATGTATGTAATTTTTCCCACTCGCCTTTGCCTAAAAGCAACA 27 11407329 0.861610961 10 26 188 0.974358974 1.278753601 0.358974359 0.333333333 0.538461538 27 0 1 38 X:11407309-11407423 7 14.5 2473 FBgn0001624 7812.856667 177.1533333 273.5833333 0.001855915 0.081849998 0.053000305 0 0 0 0.25 dme-miR-980-3p 7mer-m8 GGCAGCT X 11432091 11432097 - X_11432091_11432097_- 0.657636113 0.658620072 0.658128092 0.000695793 Evi5 FBtr0300733|FBtr0332620|FBtr0073547 11431331|11431331|11430521 11433279|11434760|11433279 X - 11432053 11432118 3'utr Evi5 FlyBase G66657.1 TGGTTCATTTAACCCATATTTGGCAGCTTGTCGCGTAAAACGATTTCGATTTTGACATCGACTTTC 310 11432098 0.7391194 10 302 2354 0.974093264 2.274157849 0.007772021 0.193548387 0.352331606 310 9 1 376 X:11432053-11432118 7 Evi5 FBtr0300733|FBtr0332620|FBtr0073547 11431331|11431331|11430521 11433279|11434760|11433279 GGCAGCT 7mer-m8 dme-miR-980-3p X - 11432058 11432127 3'utr Evi5 FlyBase G50187.1 TGATTTATATGGTTCATTTAACCCATATTTGGCAGCTTGTCGCGTAAAACGATTTCGATTTTGACATCGA 151 11432098 0.978917616 10 149 1096 0.99122807 2.354108439 0.00877193 0.370860927 0.583333333 151 2 0 226 X:11432058-11432127 7 226.5 2474 FBgn0262740 507.6533333 10.50666667 16.15 0.446170615 21.55774112 14.0247678 1 1 1 0.25 dme-miR-1003-3p 7mer-A1 TGTGAGA X 11432830 11432836 - X_11432830_11432836_- 0.801931551 0.801083787 0.801507669 0.000599485 Evi5 FBtr0300733|FBtr0332620|FBtr0073547 11431331|11431331|11430521 11433279|11434760|11433279 X - 11432695 11432896 3'utr Evi5 FlyBase G66660.1 ATGTTTTGCAATCGAAACACACTCATATTTATTTATTTTAAATCCTAATTGAAACGATATTGTGAGAGTATTTTACACCCCTGTACATTAATCAATACGGCAACTAATCCGATTCGATGCGATGCGATGGATTGGAGTTAGGAGATTGGCATTTTGATATACCCTAGATGTATGGCACATATGCAATGCAATGAATTTTATG 80 11432837 0.900703208 25 75 580 0.943820225 1.225309282 0.101123596 0.1 0.191011236 80 1 4 84 X:11432695-11432896 7 Evi5 FBtr0300733|FBtr0332620|FBtr0073547 11431331|11431331|11430521 11433279|11434760|11433279 TGTGAGA 7mer-A1 dme-miR-1003-3p X - 11432781 11432850 3'utr Evi5 FlyBase G50188.2 AATTGAAACGATATTGTGAGAGTATTTTACACCCCTGTACATTAATCAATACGGCAACTAATCCGATTCG 31 11432837 0.767691074 5 28 190 0.954545455 1.62324929 0.295454545 0.35483871 0.545454545 31 2 0 42 X:11432781-11432850 7 31 2475 FBgn0262740 507.6533333 10.50666667 16.15 0.061065294 2.950507614 1.919504644 1 1 1 0.25 dme-miR-92b-3p 6mer3-8 GTGCAA X 11458577 11458582 + X_11458577_11458582_+ 0.774275848 0.471383197 0.622829522 0.214177411 HP5 FBtr0073499 11458311 11459227 X + 11458564 11458586 3'utr HP5 FlyBase G60557.1 GAGAAAGCTATTGGTGCAAACGT 6 11458575 0.600288547 3 6 22 1 0.903089987 0 0.166666667 0.375 6 0 0 8 X:11458564-11458586 6 HP5 FBtr0073499 11458311 11459227 GTGCAA 6mer3-8 dme-miR-92b-3p X + 11458537 11458584 3'utr HP5 FlyBase G45762.1 GTTGAAAATACCAAAGTATTTTTGCAAGAGAAAGCTATTGGTGCAAAC 6 11458575 0.960394324 3 5 24 0.9 0.653212514 0.5 0.333333333 0.6 6 0 1 9 X:11458537-11458584 6 4.5 2476 FBgn0030301 1355.486667 49.67666667 76.80666667 0.003319841 0.090585788 0.058588664 2 2 2 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG X 11605490 11605495 + X_11605490_11605495_+ 0.996958136 0.990116391 0.993537263 0.004837812 rho-4 FBtr0073518|FBtr0073519 11605445|11605445 11606288|11606000 X + 11605469 11605506 3'utr rho-4 FlyBase G60633.1 AGCCCTAACCCTTAACCATGTCCAAAGTGCACTTCGAT 11 11605487 0.673163228 4 9 59 0.916666667 0.740362689 0.166666667 0.090909091 0.166666667 11 0 1 11 X:11605469-11605506 6 rho-4 FBtr0073519|FBtr0073518 11605445|11605445 11606000|11606288 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" X + 11605438 11605524 stop_codon rho-4 FlyBase G45810.1 TACAACTAGCCCCATCACTAGCTCTAGCCCTAGCCCTAACCCTTAACCATGTCCAAAGTGCACTTCGATATTGAGCCGAGGTTGCAG 15 11605487 0.960185433 9 14 66 0.96 1.380211242 0.2 0.6 0.76 15 1 0 24 X:11605438-11605524 6 9 2477 FBgn0030318 1970.58 111.7533333 171.94 0.004567183 0.080534511 0.052343841 3 3 3 0.25 dme-miR-14-3p 8mer-A1 AAGACTGA X 11606698 11606705 - X_11606698_11606705_- 0.601601471 0.602397791 0.601999631 0.000563069 CG2247 FBtr0306133|FBtr0306135|FBtr0073536|FBtr0306134 11606492|11606492|11606288|11606492 11606782|11606782|11606782|11606782 X - 11606667 11606774 3'utr CG2247 FlyBase G66713.1 AACGCACTAGTTATTCCTAGGTGCCATAAGTTAGCTCATATATAAGCCCTCCCAGTAGCAGAGAATGCCAAGACTGAGTCTTCTCGAGAAGCATCACCTCCGAACACC 118 11606709 0.874134005 12 98 581 0.810218978 1.568201724 0.160583942 0.144067797 0.262773723 118 24 2 111 X:11606667-11606774 8 CG2247 FBtr0073536|FBtr0306134|FBtr0306133|FBtr0306135 11606288|11606492|11606492|11606492 11606782|11606782|11606782|11606782 AAGACTGA 8mer-A1 dme-miR-14-3p X - 11606680 11606735 3'utr CG2247 FlyBase G50238.1 ATATAAGCCCTCCCAGTAGCAGAGAATGCCAAGACTGAGTCTTCTCGAGAAGCATC 81 11606709 0.875378357 6 60 402 0.736 1.486666573 0.152 0.395061728 0.608 81 31 2 92 X:11606680-11606735 8 89.5 2478 FBgn0030320 921.3333333 30.09666667 46.31666667 0.097141823 2.973751246 1.932349766 4 4 4 0.25 dme-miR-980-3p 6mer3-8 GGCAGC X 11693738 11693743 + X_11693738_11693743_+ 0.764394305 0.99737062 0.880882463 0.164739122 bif FBtr0334464|FBtr0073527|FBtr0334465 11689550|11692808|11691412 11694740|11694740|11694740 X + 11693641 11693804 3'utr bif FlyBase G60701.1 CAGCAGCAGTGGGAGCAGCAATGGCAGCCACAGTCCAGGCAGCAACGGGAGCAGTCCAGCCGGAGCTGCGGGCAGCCGGTTGATGTTCAACGGGAATGGCAGCATTATGGGCATCGGCGAGGGACTGATCAAGGAGGGCGACTTGGCGGCAACGGAAGCAGGAC 63 11693737 0.999821232 13 60 180 0.96 1.857332496 0.373333333 0.126984127 0.266666667 63 3 0 72 X:11693641-11693804 6 bif FBtr0334465|FBtr0334464|FBtr0073527 11691412|11689550|11692808 11694740|11694740|11694740 GGCAGC 6mer3-8 dme-miR-980-3p X + 11693642 11693856 3'utr bif FlyBase G45853.1 AGCAGCAGTGGGAGCAGCAATGGCAGCCACAGTCCAGGCAGCAACGGGAGCAGTCCAGCCGGAGCTGCGGGCAGCCGGTTGATGTTCAACGGGAATGGCAGCATTATGGGCATCGGCGAGGGACTGATCAAGGAGGGCGACTTGGCGGCAACGGAAGCAGGACCTGGAACTGCAGATGGAGCAGGTGCCTCCAAGAAGGGTTCAGCTGTGGACGA 39 11693737 0.952141623 16 37 108 0.950819672 1.763427994 0.393442623 0.333333333 0.573770492 39 3 0 58 X:11693642-11693856 6 18 2479 FBgn0014133 2033.663333 48.19333333 73.77666667 0.008851023 0.373495643 0.243979578 1 1 1 0.25 dme-miR-7-5p 6mer3-8 GTCTTC X 11694254 11694259 + X_11694254_11694259_+ 0.809843288 0.848564057 0.829203673 0.02737974 bif FBtr0334464|FBtr0073527|FBtr0334463|FBtr0334465|FBtr0073526 11689550|11692808|11693937|11691412|11693937 11694740|11694740|11694740|11694740|11694740 X + 11694210 11694265 3'utr bif FlyBase G60705.1 TAGAGATCCGATGTGTATGTGTACAACAGCAAGCGTGTGTGTCTGTCTTCTTTATA 38 11694228 0.650923563 11 36 280 0.934782609 1.633468456 0.130434783 0.210526316 0.347826087 38 3 0 43 X:11694210-11694265 6 bif FBtr0073526|FBtr0334463|FBtr0334465|FBtr0334464|FBtr0073527 11693937|11693937|11691412|11689550|11692808 11694740|11694740|11694740|11694740|11694740 GTCTTC 6mer3-8 dme-miR-7-5p X + 11694212 11694263 3'utr bif FlyBase G45857.1 GAGATCCGATGTGTATGTGTACAACAGCAAGCGTGTGTGTCTGTCTTCTTTA 15 11694252 0.693989373 7 13 107 0.92 1.06069784 0.12 0.4 0.64 15 1 1 23 X:11694212-11694263 6 15.5 2480 FBgn0014133 2033.663333 48.19333333 73.77666667 0.007621714 0.321621248 0.210093526 26 2 14 0.25 dme-miR-308-3p 7mer-m1 TGTGATT X 11704012 11704018 + X_11704012_11704018_+ 0.462894909 0.513954217 0.488424563 0.036104377 PhKgamma FBtr0301501|FBtr0301500|FBtr0090002|FBtr0343587|FBtr0343648 11703642|11703642|11703642|11703642|11703642 11704394|11704394|11704394|11704394|11704394 X + 11703983 11704039 3'utr PhKgamma FlyBase G60721.1 AACATTACCTCCCCTGCCTTCTTCGTCCTTGTGATTTTGTTTAATACTTTTTAATTC 99 11704018 0.686928454 10 94 1183 0.938596491 1.427323786 0.263157895 0.111111111 0.228070175 99 4 3 107 X:11703983-11704039 7 PhKgamma FBtr0343648|FBtr0343587|FBtr0090002|FBtr0301500|FBtr0301501 11703642|11703642|11703642|11703642|11703642 11704394|11704394|11704394|11704394|11704394 TGTGATT 7mer-m1 dme-miR-308-3p X + 11703984 11704030 3'utr PhKgamma FlyBase G45868.1 ACATTACCTCCCCTGCCTTCTTCGTCCTTGTGATTTTGTTTAATACT 85 11704018 0.660804767 12 84 982 0.991935484 1.788875116 0.282258065 0.294117647 0.516129032 85 0 1 123 X:11703984-11704030 7 82 2481 FBgn0011754 327.82 14.47333333 22.3 0.25013727 5.665591893 3.677130045 -6 -6 -6 0.25 dme-miR-14-3p 7mer-A1 AGACTGA X 11723711 11723717 + X_11723711_11723717_+ 0.569700913 0.568247177 0.568974045 0.001027921 Tango10 FBtr0073553|FBtr0332955|FBtr0073552 11722787|11722787|11722787 11723854|11723854|11723854 X + 11723634 11723779 3'utr Tango10 FlyBase G60749.1 TTGGCGTTAATGTAGTTGTTAAATAAAATGTCTCTTCAAAAATCAGCTGTGGTCTATTATTATTATGCGTTTTCATTAGACTGAACTAAAGAGTGTAGAATTACTGTCATTTAACGATATAATTTAGTGATTTCGGTTTTAATTAA 522 11723709 0.914210113 25 504 4182 0.968944099 1.95008655 0.046583851 0.185823755 0.340062112 522 14 6 624 X:11723634-11723779 7 Tango10 FBtr0073552|FBtr0332955|FBtr0073553 11722787|11722787|11722787 11723854|11723854|11723854 AGACTGA 7mer-A1 dme-miR-14-3p X + 11723657 11723821 3'utr Tango10 FlyBase G45886.1 TAAAATGTCTCTTCAAAAATCAGCTGTGGTCTATTATTATTATGCGTTTTCATTAGACTGAACTAAAGAGTGTAGAATTACTGTCATTTAACGATATAATTTAGTGATTTCGGTTTTAATTAAATTATTGCCTAACGTTGACCAGTCATTTTGTAAAATAACGTC 395 11723709 0.892218729 20 384 2984 0.976950355 1.963000348 0.044326241 0.293670886 0.505319149 395 8 5 551 X:11723657-11723821 7 378 2482 FBgn0030330 148.3733333 5.923333333 9.083333333 2.547627606 63.81541925 41.6146789 2 2 2 0.25 dme-miR-308-3p 7mer-m1 TGTGATT X 11763492 11763498 - X_11763492_11763498_- 0.443122556 0.443126113 0.443124335 2.47E-06 CG9360 FBtr0073613 11763472 11763643 X - 11763483 11763513 3'utr CG9360 FlyBase G66763.1 ATGTACCAAACGTTATGTGATTAAAATTCTT 25 11763501 0.694579367 4 22 174 0.884615385 1.361727836 0.115384615 0.04 0.076923077 25 3 0 23 X:11763483-11763513 7 CG9360 FBtr0073613 11763472 11763643 TGTGATT 7mer-m1 dme-miR-308-3p X - 11763483 11763516 3'utr CG9360 FlyBase G50276.1 TGCATGTACCAAACGTTATGTGATTAAAATTCTT 15 11763501 0.700413501 3 15 110 1 1.361727836 0.086956522 0.466666667 0.652173913 15 0 0 23 X:11763483-11763516 7 19.5 2483 FBgn0030332 279 33.07666667 49.99 0.069892473 0.589539454 0.390078016 3 3 3 0.25 dme-miR-980-3p 6mer3-8 GGCAGC X 11796942 11796947 + X_11796942_11796947_+ 0.921745689 0.819726383 0.870736036 0.072138539 CkIIbeta FBtr0073558|FBtr0307896|FBtr0333204 11795608|11795608|11796668 11797924|11797301|11797565 X + 11796910 11796973 5'utr CkIIbeta FlyBase G60768.1 AAGGATGTGGATCGAAGAAGAGGATGAAGATTGGCAGCAGGACACGAGCAACGAACCGAACGAA 50 11796941 0.786101956 3 49 97 0.949152542 1.748188027 0.186440678 0.16 0.288135593 50 3 0 56 X:11796910-11796973 6 CkIIbeta FBtr0333204|FBtr0073558|FBtr0307896 11796668|11795608|11795608 11797565|11797924|11797301 GGCAGC 6mer3-8 dme-miR-980-3p X + 11796918 11796969 5'utr CkIIbeta FlyBase G45906.1 GGATCGAAGAAGAGGATGAAGATTGGCAGCAGGACACGAGCAACGAACCGAA 36 11796941 0.785545432 3 35 64 0.982142857 1.740362689 0.196428571 0.388888889 0.607142857 36 1 0 55 X:11796918-11796969 6 43 2484 FBgn0000259 3146.093333 305.1066667 469.0433333 0.013667745 0.140934318 0.091675965 1 1 1 0.25 dme-miR-2a-2-5p 8mer-A1 TGATGAGA X 11801933 11801940 - X_11801933_11801940_- 0.568783911 0.595531208 0.582157559 0.018913197 Hsc70-3 FBtr0073609|FBtr0345166|FBtr0073608|FBtr0073610|FBtr0073611 11801694|11801694|11801694|11801694|11801694 11802612|11802612|11802612|11802612|11802612 X - 11801874 11801969 3'utr Hsc70-3 FlyBase G66766.1 ATATATCGGGGAATCGGACTGTATTGTATTGATGAGATATAGAAGAAAGAGAGAGAGAGAGGAGCCAGGGAGCTGCGGGTCGTGCGGAGGAGGAGA 45 11801930 0.961533878 10 43 216 0.962962963 1.238882089 0.240740741 0.133333333 0.277777778 45 0 2 52 X:11801874-11801969 8 Hsc70-3 FBtr0073610|FBtr0073608|FBtr0345166|FBtr0073609|FBtr0073611 11801694|11801694|11801694|11801694|11801694 11802612|11802612|11802612|11802612|11802612 TGATGAGA 8mer-A1 dme-miR-2a-2-5p X - 11801768 11801970 3'utr Hsc70-3 FlyBase G50278.1 AATATATCGGGGAATCGGACTGTATTGTATTGATGAGATATAGAAGAAAGAGAGAGAGAGAGGAGCCAGGGAGCTGCGGGTCGTGCGGAGGAGGAGAATAGGTCGATGAGGAATGGGAACGGCAGAAGAGCAAGAGATAAACCACGAAATCATACGGAAACCACTAGAGAGCAGCGGCACACAACATCGGCCAGGCTTCATAA 46 11801939 0.999950049 18 36 174 0.823529412 1.748188027 0.191176471 0.347826087 0.558823529 46 12 0 56 X:11801768-11801970 8 26 2485 FBgn0001218 13055.07 506.7333333 774.0533333 0.001991563 0.051309038 0.033589417 -10 -1 -5.5 0.25 dme-miR-14-3p 7mer-A1 AGACTGA X 11802532 11802538 - X_11802532_11802538_- 0.779457709 0.774238697 0.776848203 0.00369039 Hsc70-3 FBtr0073609|FBtr0345166|FBtr0073608|FBtr0073610|FBtr0073611 11801694|11801694|11801694|11801694|11801694 11802612|11802612|11802612|11802612|11802612 X - 11802480 11802597 3'utr Hsc70-3 FlyBase G66770.1 CTCACATAACTTACACACAGCCCAGCCTGCATCCATTCGAGATCATAGTGTTGGAATTCAGACTGAAAAAAAAAACAATTATAACTTAATTGCAAACGCAGTAGCCACAACAACAACA 1692 11802541 0.962294804 18 1612 8797 0.951461119 1.792165671 0.326399208 0.153664303 0.290737989 1692 68 30 1921 X:11802480-11802597 7 Hsc70-3 FBtr0073610|FBtr0073608|FBtr0345166|FBtr0073609|FBtr0073611 11801694|11801694|11801694|11801694|11801694 11802612|11802612|11802612|11802612|11802612 AGACTGA 7mer-A1 dme-miR-14-3p X - 11802483 11802602 3'utr Hsc70-3 FlyBase G50282.1 CCCCCCTCACATAACTTACACACAGCCCAGCCTGCATCCATTCGAGATCATAGTGTTGGAATTCAGACTGAAAAAAAAAACAATTATAACTTAATTGCAAACGCAGTAGCCACAACAACA 1303 11802541 0.815950152 19 1256 6595 0.961621622 1.818812184 0.318918919 0.324635457 0.524324324 1303 45 26 1779 X:11802483-11802602 7 1440 2486 FBgn0001218 13055.07 506.7333333 774.0533333 0.110301975 2.841731351 1.860336928 3 3 3 0.25 dme-miR-308-3p 7mer-m1 TGTGATT X 11833432 11833438 + X_11833432_11833438_+ 0.520672119 0.520931386 0.520801753 0.000183353 rudhira FBtr0305606 11832923 11834386 X + 11833402 11833456 3'utr rudhira FlyBase G60795.1 AAAACAAAACACAAAACTCTGCAAAAAAATTGTGATTTATCGAAAAGAAAAACAA 157 11833431 0.97909335 6 154 1074 0.985294118 1.826074803 0.200980392 0.248407643 0.421568627 157 1 2 201 X:11833402-11833456 7 rudhira FBtr0305606 11832923 11834386 TGTGATT 7mer-m1 dme-miR-308-3p X + 11833406 11833453 3'utr rudhira FlyBase G45916.1 CAAAACACAAAACTCTGCAAAAAAATTGTGATTTATCGAAAAGAAAAA 102 11833432 0.779517959 4 97 694 0.958333333 1.537819095 0.222222222 0.323529412 0.520833333 102 3 3 138 X:11833406-11833453 7 128.5 2487 FBgn0266019 2080.863333 30.08666667 46.56 0.061753215 4.270994904 2.759879725 1 0 0.5 0.25 dme-miR-980-3p 7mer-A1 GCAGCTA X 11833902 11833908 + X_11833902_11833908_+ 0.589136793 0.660379072 0.624757932 0.050375913 rudhira FBtr0305606 11832923 11834386 X + 11833883 11833934 3'utr rudhira FlyBase G60798.1 CACACACACACACACACATGCAGCTAAAGCTGTTTGCAGAACACACAGTTGG 19 11833901 0.997671864 3 19 32 1 1.322219295 0.523809524 0.105263158 0.19047619 19 0 0 21 X:11833883-11833934 7 rudhira FBtr0305606 11832923 11834386 GCAGCTA 7mer-A1 dme-miR-980-3p X + 11833886 11833927 3'utr rudhira FlyBase G45918.1 ACACACACACACACATGCAGCTAAAGCTGTTTGCAGAACACA 15 11833901 0.998622171 4 15 38 1 1.361727836 0.260869565 0.466666667 0.652173913 15 0 0 23 X:11833886-11833927 7 13.5 2488 FBgn0266019 2080.863333 30.08666667 46.56 0.006487692 0.448703745 0.289948454 1 1 1 0.25 dme-miR-968-5p 7mer-A1 CTACTTA X 11836035 11836041 + X_11836035_11836041_+ 0.376095912 0.334604551 0.355350231 0.02933878 rudhira FBtr0305605 11835262 11837460 X + 11836011 11836083 3'utr rudhira FlyBase G60808.1 TATGTAATAGCATAATAGCTCCATCTACTTACCCTAGACTAAAGAAGCCCAAATTTCGCTTATTTTTCCAACT 20 11836064 0.983612219 7 17 133 0.875 0.84509804 0.083333333 0.15 0.291666667 20 1 2 21 X:11836011-11836083 7 rudhira FBtr0305605 11835262 11837460 CTACTTA 7mer-m8 dme-miR-1002-5p X + 11836031 11836066 3'utr rudhira FlyBase G45925.1 CCATCTACTTACCCTAGACTAAAGAAGCCCAAATTT 6 11836035 0.869792899 4 5 28 0.909090909 0.698970004 0.272727273 0.5 0.727272727 6 0 1 10 X:11836031-11836066 7 8 2489 FBgn0266019 2080.863333 30.08666667 46.56 0.003844558 0.265898515 0.171821306 -29 0 -14.5 0.25 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA X 11837104 11837110 + X_11837104_11837110_+ 0.452079348 0.576600036 0.514339692 0.088049431 rudhira FBtr0305605|FBtr0305605 11835262|11835262 11837460|11837460 X + 11837072 11837130 3'utr rudhira FlyBase G60815.1 AGACATATAGATACGCAAATTGGCAGAACATTTACTTAAAACCCATACCTAAATATATG 26 11837102 0.795662072 6 25 150 0.965517241 1.146128036 0.068965517 0.115384615 0.206896552 26 0 1 28 X:11837072-11837130 7 rudhira FBtr0305605|FBtr0305605 11835262|11835262 11837460|11837460 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" X + 11837080 11837118 3'utr rudhira FlyBase G45929.1 AGATACGCAAATTGGCAGAACATTTACTTAAAACCCATA 10 11837102 0.910907485 3 10 49 1 1.146128036 0 0.2 0.428571429 10 0 0 14 X:11837080-11837118 7 15 2490 FBgn0266019 2080.863333 30.08666667 46.56 0.007208546 0.498559716 0.322164948 2 2 2 0.25 dme-miR-283-5p 6mer3-8 TGATAT X 11864981 11864986 - X_11864981_11864986_- 0.999848263 0.949545779 0.974697021 0.035569239 CG2025 FBtr0073601 11864649 11865104 X - 11864971 11865031 3'utr CG2025 FlyBase G66823.1 GCCAAAGGTAGACGATTAGTTACACAGGAAGCAACCTTTTTCTCATGATATCCTCCTGACC 12 11864993 0.990955716 7 10 81 0.857142857 1.079181246 0.214285714 0.166666667 0.285714286 12 2 0 12 X:11864971-11865031 6 CG2025 FBtr0073601 11864649 11865104 TGATAT 6mer3-8 dme-miR-283-5p X - 11864949 11864993 3'utr CG2025 FlyBase G50323.1 TTTCTCATGATATCCTCCTGACCAAGTCGGGAATTTGCTCTTATG 5 11864992 0.954531376 3 4 41 0.8 0.602059991 0 0 0 5 1 0 4 X:11864949-11864993 6 6 2491 FBgn0030344 443.1533333 13.33 20.59 0.013539332 0.450112528 0.291403594 7 6 6.5 0.25 dme-miR-283-5p 7mer-m1 GATATTT X 11870950 11870956 + X_11870950_11870956_+ 0.713251812 0.539944939 0.626598376 0.122546484 CG1847 FBtr0330413|FBtr0073567 11870497|11870431 11871168|11871168 X + 11870932 11870974 3'utr CG1847 FlyBase G60830.1 TTGTATATCCCTATATGCGATATTTACTCGTAGCTAGAATCTA 17 11870945 0.78826669 5 17 164 1 1.397940009 0.12 0.352941176 0.56 17 0 0 25 X:11870932-11870974 7 CG1847 FBtr0330413|FBtr0073567 11870497|11870431 11871168|11871168 GATATTT 7mer-m1 dme-miR-283-5p X + 11870890 11870965 3'utr CG1847 FlyBase G45938.2 CACATTTGTTGTCCATAGTCGTATATGTATGTTTGTATTGTATTGTATATCCCTATATGCGATATTTACTCGTAGC 21 11870945 0.813196203 5 16 202 0.827586207 1.380211242 0.103448276 0.333333333 0.517241379 21 5 0 24 X:11870890-11870965 7 15 2492 FBgn0030345 101 6.976666667 10.73666667 0.148514851 2.150023889 1.397081652 5 5 5 0.25 dme-miR-305-3p 7mer-m1 TGTGCCG X 11877805 11877811 - X_11877805_11877811_- 0.797517551 0.716368235 0.756942893 0.057381291 CG10353 FBtr0331591|FBtr0331594|FBtr0344702|FBtr0114451|FBtr0308070|FBtr0114452|FBtr0344703 11877735|11877735|11877735|11877735|11877735|11877735|11877735 11878742|11878742|11878742|11878742|11878742|11878742|11878742 X - 11877793 11877827 3'utr CG10353 FlyBase G66853.1 AAAACAAATTGTGTTGTGTGCCGGATAAAAAAAAA 10 11877810 0.717539577 5 10 62 1 1.041392685 0.181818182 0.1 0.181818182 10 0 0 11 X:11877793-11877827 7 CG10353 FBtr0344702|FBtr0331594|FBtr0331591|FBtr0344703|FBtr0114452|FBtr0308070|FBtr0114451 11877735|11877735|11877735|11877735|11877735|11877735|11877735 11878742|11878742|11878742|11878742|11878742|11878742|11878742 TGTGCCG 7mer-m1 dme-miR-305-3p X - 11877795 11877826 3'utr CG10353 FlyBase G50343.1 AAACAAATTGTGTTGTGTGCCGGATAAAAAAA 5 11877812 0.662485519 3 5 35 1 0.903089987 0 0.6 0.75 5 0 0 8 X:11877795-11877826 7 7.5 2493 FBgn0030349 1118.516667 30.53 46.76333333 0.006705309 0.245660007 0.160382066 -1 1 0 0.25 dme-miR-11-3p 8mer-m1 CTGTGATG X 11889011 11889018 + X_11889011_11889018_+ 0.460360596 0.46184666 0.461103628 0.001050831 CG1840 FBtr0073571|FBtr0331590 11888967|11888967 11889186|11889186 X + 11888997 11889035 3'utr CG1840 FlyBase G60837.2 AATCCAACTCACCTCTGTGATGCGGCAATTAAAATAGAT 20 11889010 0.797048552 4 15 96 0.814814815 1.041392685 0.259259259 0.2 0.407407407 20 4 1 22 X:11888997-11889035 8 CG1840 FBtr0073571|FBtr0331590 11888967|11888967 11889186|11889186 CTGTGATG 8mer-m1 dme-miR-11-3p X + 11888997 11889026 3'utr CG1840 FlyBase G45942.1 AATCCAACTCACCTCTGTGATGCGGCAATT 19 11889010 0.67823952 4 14 101 0.740740741 1.301029996 0.185185185 0.315789474 0.518518519 19 7 0 20 X:11888997-11889026 8 19 2494 FBgn0030351 18.33333333 3.326666667 5.123333333 1.036363636 5.711422846 3.708523097 1 1 1 0.25 dme-miR-184-3p 8mer-A1 TCCGTCCA X 11907593 11907600 - X_11907593_11907600_- 0.631023022 0.631061123 0.631042072 2.69E-05 pot FBtr0073595|FBtr0305609 11907407|11907407 11908579|11908579 X - 11907574 11907650 3'utr pot FlyBase G66883.1 TACGATATACTTTCTCATGATAATCAATTTTCGCGTAACATTAGTACTAATCCGTCCAAGACATATACTATAAGTTT 79 11907602 0.78841305 10 71 591 0.905263158 1.33243846 0.210526316 0.151898734 0.294736842 79 6 3 86 X:11907574-11907650 8 pot FBtr0305609|FBtr0073595 11907407|11907407 11908579|11908579 TCCGTCCA 8mer-A1 dme-miR-184-3p X - 11907574 11907649 3'utr pot FlyBase G50359.1 ACGATATACTTTCTCATGATAATCAATTTTCGCGTAACATTAGTACTAATCCGTCCAAGACATATACTATAAGTTT 62 11907604 0.75493953 7 57 431 0.91011236 1.607455023 0.269662921 0.322580645 0.528089888 62 7 1 81 X:11907574-11907649 8 46 2495 FBgn0250871 1 0.03 0.05 46 1533.333333 920 2 4 3 0.25 dme-miR-308-3p 7mer-m1 TGTGATT X 12023151 12023157 - X_12023151_12023157_- 0.518802664 0.517522755 0.518162709 0.000905026 Usp7 FBtr0073641 12022835 12024307 X - 12023099 12023208 3'utr Usp7 FlyBase G66898.1 AGGCGTATGTATGGGAGATGAAAAATATAAGATTTGTTTCAAACAATTATTTGTGATTTTTAAACATGAAATGATAAAAATGTATGCAAAGGACTAGACAACATAAAATT 107 12023159 0.87340866 16 105 935 0.9765625 1.619788758 0.171875 0.168224299 0.3046875 107 1 2 125 X:12023099-12023208 7 Usp7 FBtr0073641 12022835 12024307 TGTGATT 7mer-m1 dme-miR-308-3p X - 12023087 12023202 3'utr Usp7 FlyBase G50369.1 ATGTATGGGAGATGAAAAATATAAGATTTGTTTCAAACAATTATTTGTGATTTTTAAACATGAAATGATAAAAATGTATGCAAAGGACTAGACAACATAAAATTAATTAATAAATT 59 12023159 0.918033586 14 59 461 1 1.949390007 0.06741573 0.389830508 0.595505618 59 0 0 89 X:12023087-12023202 7 46 2496 FBgn0030366 4316.233333 92.58333333 142.4366667 0.010657441 0.496849685 0.322950551 2 2 2 0.25 dme-miR-263a-5p 8mer-m1 GTGCCATT X 1217121 1217128 - X_1217121_1217128_- 0.432527332 0.304414786 0.368471059 0.090589218 CG3638 FBtr0070249|FBtr0330206|FBtr0330207|FBtr0346960|FBtr0336978 1215712|1217081|1217081|1217081|1215287 1221459|1219704|1221459|1221459|1221459 X - 1217101 1217157 3'utr CG3638 FlyBase G63956.1 ACGGATCAGTTGTGGAAGAAATAATTGTAGTGCCATTAGAGATTGGAAAATTGAATA 8 1217122 0.972666833 6 8 51 1 0.954242509 0.222222222 0.125 0.222222222 8 0 0 9 X:1217101-1217157 8 CG3638 FBtr0346960|FBtr0336978|FBtr0330207|FBtr0330206|FBtr0070249 1217081|1215287|1217081|1217081|1215712 1221459|1221459|1221459|1219704|1221459 GTGCCATT 8mer-m1 dme-miR-263a-5p X - 1217109 1217136 3'utr CG3638 FlyBase G48212.1 TAATTGTAGTGCCATTAGAGATTGGAAA 5 1217121 0.796256637 3 5 34 1 0.903089987 0 0.6 0.75 5 0 0 8 X:1217109-1217136 8 6 2497 FBgn0261444 352.62 5.606666667 8.55 0.017015484 1.070154578 0.701754386 -6 -7 -6.5 0.25 dme-miR-278-3p 6mer3-8 CCCACC X 1220356 1220361 - X_1220356_1220361_- 0.819653333 0.866637915 0.843145624 0.033223129 CG3638 FBtr0070249|FBtr0308707|FBtr0330207|FBtr0346960|FBtr0336978 1215712|1217947|1217081|1217081|1215287 1221459|1221459|1221459|1221459|1221459 X - 1220330 1220399 3'utr CG3638 FlyBase G63959.1 ATCCCGCCTCCATTGTGAACCAACCGTTGCCCGAGATTCCCACCAATCAACAACAGTCAAAGATCTCCGC 6 1220363 0.945988905 3 6 24 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 X:1220330-1220399 6 CG3638 FBtr0346960|FBtr0336978|FBtr0330207|FBtr0070249|FBtr0308707 1217081|1215287|1217081|1215712|1217947 1221459|1221459|1221459|1221459|1221459 CCCACC 6mer3-8 dme-miR-278-3p X - 1220345 1220378 3'utr CG3638 FlyBase G48215.1 AACCGTTGCCCGAGATTCCCACCAATCAACAACA 5 1220363 0.796871475 2 4 16 0.857142857 0.77815125 0 0.2 0.428571429 5 1 0 6 X:1220345-1220378 6 3.5 2498 FBgn0261444 352.62 5.606666667 8.55 0.009925699 0.624256837 0.409356725 2 2 2 0.25 dme-miR-14-3p 6mer2-7 AGACTG X 12331843 12331848 + X_12331843_12331848_+ 0.911419171 0.912334727 0.911876949 0.000647356 Ten-a FBtr0300203|FBtr0299860|FBtr0300201|FBtr0346129|FBtr0308222|FBtr0299858|FBtr0308221|FBtr0346335|FBtr0308223|FBtr0299859|FBtr0310078 12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182 12332165|12332165|12332165|12335214|12332165|12332165|12332165|12332165|12332165|12332165|12335214 X + 12331825 12331869 3'utr Ten-a FlyBase G60869.1 TGGTACTCGAGCTTTTTGAGACTGGCATAGTTTTAAACAAAACCA 140 12331841 0.790078963 9 134 1296 0.941558442 1.860338007 0.012987013 0.078571429 0.162337662 140 8 1 145 X:12331825-12331869 6 Ten-a FBtr0310078|FBtr0308223|FBtr0299859|FBtr0346335|FBtr0308221|FBtr0299858|FBtr0308222|FBtr0346129|FBtr0300201|FBtr0299860|FBtr0300203 12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182|12331182 12335214|12332165|12332165|12332165|12332165|12332165|12332165|12335214|12332165|12332165|12332165 AGACTG 6mer2-7 dme-miR-14-3p X + 12331825 12331867 3'utr Ten-a FlyBase G45964.1 TGGTACTCGAGCTTTTTGAGACTGGCATAGTTTTAAACAAAAC 72 12331841 0.789914029 6 68 692 0.943396226 2 0.018867925 0.375 0.575471698 72 6 0 100 X:12331825-12331867 6 106 2499 FBgn0267001 445.45 3.99 6.113333333 0.237961612 26.56641604 17.3391494 2 2 2 0.25 dme-miR-1007-3p 6mer3-8 TGAGCT X 12460293 12460298 - X_12460293_12460298_- 0.409617569 0.613159726 0.511388647 0.143925999 Rab40 FBtr0073668|FBtr0339841|FBtr0073669 12459794|12459794|12459794 12460365|12460365|12460365 X - 12460267 12460313 3'utr Rab40 FlyBase G66931.1 GACATTAACTTTAATTGAGCTCTACTTATGTACTCTAGGCTATAACA 26 12460298 0.783987042 5 25 232 0.972972973 1.556302501 0.216216216 0.384615385 0.567567568 26 1 0 36 X:12460267-12460313 6 Rab40 FBtr0073669|FBtr0339841|FBtr0073668 12459794|12459794|12459794 12460365|12460365|12460365 TGAGCT 6mer3-8 dme-miR-1007-3p X - 12460273 12460309 3'utr Rab40 FlyBase G50395.1 TTAACTTTAATTGAGCTCTACTTATGTACTCTAGGCT 13 12460299 0.97318688 4 12 112 0.952380952 1.301029996 0 0.384615385 0.619047619 13 1 0 20 X:12460273-12460309 6 18.5 2500 FBgn0030391 73.34 5.683333333 8.663333333 0.252249795 3.255131965 2.135436706 0 1 0.5 0.25 dme-miR-283-5p 7mer-m1 GATATTT X 12584651 12584657 - X_12584651_12584657_- 0.387044074 0.515665071 0.451354573 0.090948781 LIMK1 FBtr0073660|FBtr0073661 12584383|12584383 12585938|12585938 X - 12584621 12584798 3'utr LIMK1 FlyBase G66954.1 ATATAGGATCGAAACGCTTGCAATTAACTGCTTACATAAGACATTTGAGTCGGGCCCTTGTTATACGGACGTATGCCAGTAGAACAGTGGCCGCGCCGAACCGATCTAGCATTTAACTATCTATATACAACAAATATGTGCGATATTTTTTATATGCAGCTAATTTAATGTGTTGTAT 69 12584662 0.986754341 15 68 584 0.987951807 1.913813852 0.036144578 0.173913043 0.313253012 69 1 0 82 X:12584621-12584798 7 LIMK1 FBtr0073661|FBtr0073660 12584383|12584383 12585938|12585938 GATATTT 7mer-m1 dme-miR-283-5p X - 12584633 12584676 3'utr LIMK1 FlyBase G50411.1 ATATACAACAAATATGTGCGATATTTTTTATATGCAGCTAATTT 27 12584662 0.974713499 4 26 219 0.972972973 1.556302501 0 0.333333333 0.513513514 27 1 0 36 X:12584633-12584676 7 39.5 2501 FBgn0041203 1320 31.21333333 47.99333333 0.029924242 1.265484836 0.823030977 5 5 5 0.25 dme-miR-263a-5p 7mer-m8 GTGCCAT X 12585296 12585302 - X_12585296_12585302_- 0.642056913 0.637740269 0.639898591 0.003052297 LIMK1 FBtr0073660|FBtr0073661|FBtr0301831|FBtr0073659 12584383|12584383|12584943|12584943 12585938|12585938|12585938|12585938 X - 12585283 12585328 3'utr LIMK1 FlyBase G66959.1 CGGATAAAGAGAGAAGGAAGAAACTTGTGCCATGATGTTGATGCGA 27 12585303 0.953136275 2 27 123 1 1.462397998 0.517241379 0.037037037 0.103448276 27 0 0 29 X:12585283-12585328 7 LIMK1 FBtr0073659|FBtr0301831|FBtr0073661|FBtr0073660 12584943|12584943|12584383|12584383 12585938|12585938|12585938|12585938 GTGCCAT 7mer-m8 dme-miR-263a-5p X - 12585280 12585321 3'utr LIMK1 FlyBase G50416.1 AGAGAGAAGGAAGAAACTTGTGCCATGATGTTGATGCGAAAA 13 12585303 0.946782185 2 13 57 1 1.278753601 0.210526316 0.307692308 0.526315789 13 0 0 19 X:12585280-12585321 7 20 2502 FBgn0041203 1320 31.21333333 47.99333333 0.015151515 0.640751815 0.416724545 1 1 1 0.25 dme-miR-317-3p 6mer3-8 TGTGTT X 12609712 12609717 + X_12609712_12609717_+ 0.986314299 0.921236233 0.953775266 0.046017166 Sec16 FBtr0340106|FBtr0310304|FBtr0113445|FBtr0340104 12608756|12608756|12608756|12608756 12609910|12609910|12609910|12609910 X + 12609661 12609767 3'utr Sec16 FlyBase G60909.1 AGAAGCAAATGAATTGTTCTCCCTGGTTTCTCTTATCAATGTATTCTCCTCTGTGTTTCTTTTTTACAATTGGTGTGAAATATGCAAATGATTCCAATTATATATAT 21 12609687 0.901102045 13 21 204 1 1.380211242 0.041666667 0.095238095 0.208333333 21 0 0 24 X:12609661-12609767 6 Sec16 FBtr0340104|FBtr0113445|FBtr0310304|FBtr0340106 12608756|12608756|12608756|12608756 12609910|12609910|12609910|12609910 TGTGTT 6mer3-8 dme-miR-317-3p X + 12609660 12609721 3'utr Sec16 FlyBase G45985.1 AAGAAGCAAATGAATTGTTCTCCCTGGTTTCTCTTATCAATGTATTCTCCTCTGTGTTTCTT 9 12609704 0.964568856 6 6 99 0.769230769 0.698970004 0.153846154 0.444444444 0.615384615 9 2 1 10 X:12609660-12609721 6 5.5 2503 FBgn0052654 1220.54 20.34 31.29 0.004506202 0.270403147 0.175775008 25 8 16.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 12679537 12679542 + X_12679537_12679542_+ 0.50888052 0.529708117 0.519294318 0.014727337 Tis11 FBtr0073683|FBtr0073683|FBtr0073683|FBtr0345165|FBtr0345165|FBtr0345165|FBtr0333756|FBtr0333756|FBtr0333756 12679239|12679239|12679239|12679239|12679239|12679239|12679239|12679239|12679239 12679702|12679702|12679702|12679702|12679702|12679702|12682554|12682554|12682554 X + 12679484 12679593 5'utr Tis11 FlyBase G60958.1 AACACAGACACCCCTTAATTATGAACCGATCCTTGATATCAATTCTCTCATTGCTGTGACAGTCAAACGTAATCGTTATACAATAATCGTTATATGAGAAGGACCGAATT 389 12679534 0.918152102 20 381 3064 0.979638009 2.335457901 0.088235294 0.12596401 0.230769231 389 8 1 433 X:12679484-12679593 6 Tis11 FBtr0333756|FBtr0333756|FBtr0333756|FBtr0345165|FBtr0345165|FBtr0345165|FBtr0073683|FBtr0073683|FBtr0073683 12679239|12679239|12679239|12679239|12679239|12679239|12679239|12679239|12679239 12682554|12682554|12682554|12679702|12679702|12679702|12679702|12679702|12679702 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X + 12679489 12679561 5'utr Tis11 FlyBase G46019.1 AGACACCCCTTAATTATGAACCGATCCTTGATATCAATTCTCTCATTGCTGTGACAGTCAAACGTAATCGTTA 239 12679534 0.755531465 11 224 1903 0.942558747 1.955447211 0.093994778 0.426778243 0.64229765 239 19 3 361 X:12679489-12679561 6 274.5 2504 FBgn0011837 4912.7 119.65 184.0333333 0.055875588 2.294191392 1.491577613 3 3 3 0.25 dme-miR-970-3p 8mer-A1 TCTTATGA X 12679763 12679770 + X_12679763_12679770_+ 0.534104461 0.535058293 0.534581377 0.000674438 Tis11 FBtr0333756 12679239 12682554 X + 12679737 12679822 3'utr Tis11 FlyBase G60960.1 ATGAATGCTATAGCTAAACAAAACATTCTTATGAACTGGACAAGATACAAAGACGGAGATAACGAAAAGGACTATTTGGGAATCTT 927 12679762 0.862003026 11 920 5440 0.991493384 2.543654233 0.396975425 0.116504854 0.225897921 927 7 2 1049 X:12679737-12679822 8 Tis11 FBtr0333756 12679239 12682554 TCTTATGA 8mer-A1 dme-miR-970-3p X + 12679723 12679841 3'utr Tis11 FlyBase G46021.1 AAAACATAGCTAGCATGAATGCTATAGCTAAACAAAACATTCTTATGAACTGGACAAGATACAAAGACGGAGATAACGAAAAGGACTATTTGGGAATCTTCAGCGAATGTTGCTCAAAT 594 12679762 0.972471895 9 590 3508 0.995348837 2.330413773 0.404651163 0.326599327 0.534883721 594 1 3 856 X:12679723-12679841 8 751 2505 FBgn0011837 4912.7 119.65 184.0333333 0.152869094 6.276640201 4.080782467 1 1 1 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA X 12679888 12679895 + X_12679888_12679895_+ 0.609578611 0.621757475 0.615668043 0.008611783 Tis11 FBtr0333756 12679239 12682554 X + 12679836 12679962 3'utr Tis11 FlyBase G60961.1 TCAAATCAAATCAACAAACCCCACGGCCAACGACGAATGTGAAAATCGTTCCTGCATTTATAGAAACTACTGCAGTGCATCCATTAGTAAAACCCATGCACACGCACACCTGTCGCTTTTGTTCAAT 32 12679896 0.978553899 11 30 194 0.944444444 1.531478917 0.138888889 0.125 0.222222222 32 2 0 34 X:12679836-12679962 8 Tis11 FBtr0333756 12679239 12682554 TGCATTTA 8mer-A1 dme-miR-277-3p X + 12679865 12679917 3'utr Tis11 FlyBase G46022.1 ACGACGAATGTGAAAATCGTTCCTGCATTTATAGAAACTACTGCAGTGCATCC 14 12679888 0.837078106 7 12 98 0.857142857 1.255272505 0.238095238 0.357142857 0.571428571 14 3 0 18 X:12679865-12679917 8 16.5 2506 FBgn0011837 4912.7 119.65 184.0333333 0.003358642 0.137902215 0.089657671 -8 0 -4 0.25 dme-miR-7-5p 8mer-A1 GTCTTCCA X 12680143 12680150 + X_12680143_12680150_+ 0.580242902 0.567099665 0.573671284 0.009293646 Tis11 FBtr0333756 12679239 12682554 X + 12680054 12680168 3'utr Tis11 FlyBase G60963.1 ATATATATATATGCATATTTGGCCACCACCTGTGTATATATAACTTTTGATGTGGATAAATAGAGAGCGAGATAGAGAGTTGGTCCGATGTCTTCCAATCCAAGCCAAGCCAAGC 83 12680142 0.982557211 11 81 606 0.980392157 2 0.029411765 0.180722892 0.333333333 83 2 0 100 X:12680054-12680168 8 Tis11 FBtr0333756 12679239 12682554 GTCTTCCA 8mer-A1 dme-miR-7-5p X + 12680118 12680169 3'utr Tis11 FlyBase G46024.1 GAGCGAGATAGAGAGTTGGTCCGATGTCTTCCAATCCAAGCCAAGCCAAGCC 46 12680142 0.980509136 4 45 321 0.985507246 1.832508913 0.15942029 0.326086957 0.550724638 46 1 0 68 X:12680118-12680169 8 57.5 2507 FBgn0011837 4912.7 119.65 184.0333333 0.011704358 0.480568324 0.312443398 1 1 1 0.25 dme-miR-92b-3p 7mer-m1 TGCAATT X 12680654 12680660 + X_12680654_12680660_+ 0.763451007 0.502221394 0.632836201 0.184717222 Tis11 FBtr0333756 12679239 12682554 X + 12680625 12680694 3'utr Tis11 FlyBase G60967.1 TACATAAAACATACCAGATATATTTTATATGCAATTAATGTTAATAATTTATGAAAACAACACATGCGAC 10 12680636 0.987055853 7 9 76 0.933333333 1.146128036 0 0.5 0.666666667 10 1 0 14 X:12680625-12680694 7 Tis11 FBtr0333756 12679239 12682554 TGCAATT 7mer-m1 dme-miR-92b-3p X + 12680616 12680661 3'utr Tis11 FlyBase G46029.1 ACATCTATTTACATAAAACATACCAGATATATTTTATATGCAATTA 6 12680648 0.987143297 5 5 48 0.833333333 0.698970004 0 0 0 6 1 0 5 X:12680616-12680661 7 4 2508 FBgn0011837 4912.7 119.65 184.0333333 0.000814216 0.03343084 0.021735193 18 6 12 0.25 dme-miR-980-3p 6mer3-8 GGCAGC X 12681817 12681822 + X_12681817_12681822_+ 0.673574416 0.577344374 0.625459395 0.068044886 Tis11 FBtr0333756 12679239 12682554 X + 12681726 12681857 3'utr Tis11 FlyBase G60974.2 ACTTTGATTTTTACTTCCCATCGCAAAAAAACCCATTGTTTTCGTACTCCAATACGTATTGCAATCGAAATTGAACCGATTGGAATGTTATGGCAGCGTGCAAAAGTTTACTGTAATACCTATATTTAACAT 146 12681816 0.964546533 21 143 911 0.982142857 1.916453949 0.119047619 0.136986301 0.25 146 2 1 165 X:12681726-12681857 6 Tis11 FBtr0333756 12679239 12682554 GGCAGC 6mer3-8 dme-miR-980-3p X + 12681780 12681871 3'utr Tis11 FlyBase G46036.1 CGTATTGCAATCGAAATTGAACCGATTGGAATGTTATGGCAGCGTGCAAAAGTTTACTGTAATACCTATATTTAACATACTTATATATAATA 85 12681816 0.980100671 11 79 549 0.940397351 1.851258349 0.17218543 0.529411765 0.735099338 85 8 1 142 X:12681780-12681871 6 96 2509 FBgn0011837 4912.7 119.65 184.0333333 0.019541189 0.802340159 0.52164463 1 1 1 0.25 dme-miR-1007-3p 7mer-m8 TGAGCTT X 12681920 12681926 + X_12681920_12681926_+ 0.505206845 0.399851775 0.45252931 0.074497235 Tis11 FBtr0333756 12679239 12682554 X + 12681898 12681958 3'utr Tis11 FlyBase G60975.1 TTTAAAAAGCCTAACTTAGACCTGAGCTTTGGTTATCATCATGATGATTATTCTTATATTT 29 12681914 0.948881574 8 25 238 0.888888889 1.204119983 0.055555556 0.206896552 0.361111111 29 3 1 32 X:12681898-12681958 7 Tis11 FBtr0333756 12679239 12682554 TGAGCTT 7mer-m8 dme-miR-1007-3p X + 12681897 12681939 3'utr Tis11 FlyBase G46037.1 TTTTAAAAAGCCTAACTTAGACCTGAGCTTTGGTTATCATCAT 15 12681914 0.914918541 5 14 93 1 1.361727836 0.086956522 0.5 0.695652174 14 0 0 23 X:12681897-12681939 7 20.5 2510 FBgn0011837 4912.7 119.65 184.0333333 0.004172858 0.171333055 0.111392864 6 6 6 0.25 dme-miR-14-3p 6mer3-8 AAGACT X 12685370 12685375 - X_12685370_12685375_- 0.988475952 0.799487238 0.893981595 0.133635262 Smr FBtr0333768|FBtr0333767 12684201|12684201 12687299|12687299 X - 12685328 12685399 3'utr Smr FlyBase G66986.1 TATATGAAGTAAACAACAAACGCTAAGACTTATTCAACAAAACAAAAATTGTAAAATATTAAAAGATAAACG 45 12685367 0.950580424 4 43 191 0.947368421 1.73239376 0.052631579 0.266666667 0.421052632 45 3 0 54 X:12685328-12685399 6 Smr FBtr0333767|FBtr0333768 12684201|12684201 12687299|12687299 AAGACT 6mer3-8 dme-miR-14-3p X - 12685353 12685397 3'utr Smr FlyBase G50432.1 TATGAAGTAAACAACAAACGCTAAGACTTATTCAACAAAACAAAA 35 12685367 0.945735132 3 34 144 0.966666667 1.763427994 0 0.571428571 0.75 35 2 0 58 X:12685353-12685397 6 39.5 2511 FBgn0265523 12357.95 106.01 163.76 0.003196323 0.372606358 0.241206644 -8 -8 -8 0.25 dme-miR-1008-3p 7mer-A1 GCTGTGA X 12774791 12774797 - X_12774791_12774797_- 0.796590825 0.796054105 0.796322465 0.000379504 CG32647 FBtr0346126|FBtr0340412 12771842|12773579 12776672|12776672 X - 12774770 12774891 3'utr CG32647 FlyBase G67064.1 ATTTTTTTCCACTTGACAGCACATCAAAGCAAATTAAATTTAACAATAAATACATATATAAAATGCGGGATATCCGAGAAAAACGTGGAGTACGGCTGTGAAATTATGTTTGCTTTAAAATA 43 12774801 0.980161692 13 36 262 0.826086957 1.102662342 0.347826087 0.069767442 0.130434783 43 6 2 38 X:12774770-12774891 7 CG32647 FBtr0340412|FBtr0346126 12773579|12771842 12776672|12776672 GCTGTGA 7mer-A1 dme-miR-1008-3p X - 12774762 12774816 3'utr CG32647 FlyBase G50491.1 GAGAAAAACGTGGAGTACGGCTGTGAAATTATGTTTGCTTTAAAATACATAAACG 22 12774803 0.983087058 5 15 117 0.636363636 1.021189299 0.363636364 0.272727273 0.515151515 22 11 1 21 X:12774762-12774816 7 25.5 2512 FBgn0052647 26.80666667 0.936666667 1.47 0.951255906 27.22419929 17.34693878 4 6 5 0.25 dme-miR-1008-3p 6mer3-8 AGCTGT X 12911753 12911758 + X_12911753_12911758_+ 0.796614886 0.999999991 0.898307438 0.143814983 CG4645 FBtr0343649|FBtr0346316|FBtr0073692 12911708|12911708|12911708 12911897|12912070|12911897 X + 12911722 12911763 3'utr CG4645 FlyBase G60994.1 GAGAAACCAGTTCGTCAACGTCGCTGAACTAAGCTGTAAATT 5 12911733 0.91649001 5 5 29 1 0.698970004 0 0 0 5 0 0 5 X:12911722-12911763 6 CG4645 FBtr0346316 12911708 12912070 AGCTGT 6mer3-8 dme-miR-1008-3p X + 12911708 12911758 stop_codon CG4645 FlyBase G46056.1 AGGATGCATTCCGCGAGAAACCAGTTCGTCAACGTCGCTGAACTAAGCTGT 8 12911745 0.975208718 6 6 38 0.833333333 1 0.083333333 0.25 0.5 8 2 0 10 X:12911708-12911758 6 3 2513 FBgn0030435 142.39 10.84666667 16.51 0.021068895 0.276582667 0.181708056 20 8 14 0.25 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 13081902 13081909 - X_13081902_13081909_- 0.625256238 0.491032509 0.558144373 0.094910488 hep FBtr0330397 13079729 13084554 X - 13081888 13081925 5'utr hep FlyBase G67104.1 ATCAACGCACTCCACCTCTAGTCAGTCCTCCACGCAGT 42 13081900 0.696249877 3 40 212 0.957446809 1.653212514 0.106382979 0.095238095 0.191489362 42 2 0 45 X:13081888-13081925 8 hep FBtr0330397 13079729 13084554 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X - 13081891 13081923 5'utr hep FlyBase G50515.1 CAACGCACTCCACCTCTAGTCAGTCCTCCACGC 19 13081900 0.734519201 4 19 94 1 1.51851394 0.121212121 0.421052632 0.666666667 19 0 0 33 X:13081891-13081923 8 30.5 2514 FBgn0010303 1946.036667 56.33 86.79333333 0.01567288 0.541452157 0.351409478 -9 -9 -9 0.25 dme-miR-1003-3p 7mer-A1 TGTGAGA X 13123232 13123238 - X_13123232_13123238_- 0.784934521 0.749732589 0.767333555 0.024891502 CG32638 FBtr0300453 13122874 13123472 X - 13123132 13123255 3'utr CG32638 FlyBase G67119.1 TTTTGTTAGTGCAATATTGTGAGAGAGACAACGATTAAGGTTAAGCATTGTAGTTAAATACGGCATCGGAATTTCATAAAGAAACGTGTAGGTGCGTGTTTTCCTTGTCCCATATACACAAACC 23 13123239 0.981113858 9 19 142 0.875 1.322219295 0.25 0.043478261 0.083333333 23 3 0 21 X:13123132-13123255 7 CG32638 FBtr0300453 13122874 13123472 TGTGAGA 7mer-A1 dme-miR-1003-3p X - 13123186 13123248 3'utr CG32638 FlyBase G50525.1 AGTGCAATATTGTGAGAGAGACAACGATTAAGGTTAAGCATTGTAGTTAAATACGGCATCGGA 14 13123239 0.891319201 6 13 73 0.95 0.977723605 0.35 0.357142857 0.55 14 0 1 19 X:13123186-13123248 7 11.5 2515 FBgn0052638 822.99 64.44 99.11666667 0.013973438 0.178460583 0.116024886 1 1 1 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA X 13123358 13123364 - X_13123358_13123364_- 0.795174228 0.793202573 0.7941884 0.001394132 CG32638 FBtr0300453 13122874 13123472 X - 13123321 13123436 3'utr CG32638 FlyBase G67120.1 ACACCACTACGATAATAGACAGCGGATTCCGCAATGGAACAGCAAAGACAACCCATGTGTAGAAAGACTTGACTAGTCAGTGTCGCTGCCGAAAGTAATCAGAATATTTGAATGCG 68 13123368 0.970191694 12 66 376 0.976190476 1.612783857 0.19047619 0.147058824 0.30952381 68 1 1 82 X:13123321-13123436 7 CG32638 FBtr0300453 13122874 13123472 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X - 13123331 13123391 3'utr CG32638 FlyBase G50526.1 AGACAACCCATGTGTAGAAAGACTTGACTAGTCAGTGTCGCTGCCGAAAGTAATCAGAATA 49 13123368 0.783315048 6 48 282 0.963855422 1.903089987 0.228915663 0.367346939 0.626506024 49 3 0 80 X:13123331-13123391 7 51 2516 FBgn0052638 822.99 64.44 99.11666667 0.061969161 0.791433892 0.514545149 4 4 4 0.25 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA X 13134356 13134362 + X_13134356_13134362_+ 0.801890429 0.796070094 0.798980262 0.004115574 CG15717 FBtr0339676 13129976 13134565 X + 13134274 13134385 3'utr CG15717 FlyBase G61016.1 CATCAATCATCGCGAGACTCTGACACAGTGGCATCTGGTCTTCTGGCTGGCGGCGGGCTTGAATATAGCCGGTAACTTCATCTACCTGATCTTCGCCAGCGCCGAGGAGCAA 39 13134354 0.983614642 12 37 285 0.953488372 1.311753861 0.302325581 0.102564103 0.186046512 39 1 1 41 X:13134274-13134385 7 CG15717 FBtr0339676 13129976 13134565 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" X + 13134300 13134382 3'utr CG15717 FlyBase G46077.1 AGTGGCATCTGGTCTTCTGGCTGGCGGCGGGCTTGAATATAGCCGGTAACTTCATCTACCTGATCTTCGCCAGCGCCGAGGAG 19 13134354 0.98484249 9 17 136 0.892857143 1.397940009 0.535714286 0.368421053 0.571428571 19 3 0 25 X:13134300-13134382 7 22.5 2517 FBgn0030451 195.7633333 20.76333333 31.87333333 0.1149347 1.083641034 0.705919264 2 2 2 0.25 dme-miR-282-5p 6mer3-8 AGAGGC X 13195603 13195608 - X_13195603_13195608_- 0.999947898 0.981324078 0.990635988 0.013169015 sno FBtr0340488|FBtr0340489 13195497|13195497 13196279|13196279 X - 13195588 13195632 3'utr sno FlyBase G67136.1 TGTAAGTTTAACCAACAGACATTGAGAGGCATCTGAATATAAGTT 14 13195610 0.624036428 4 13 66 1 1.255272505 0 0.214285714 0.388888889 14 0 0 18 X:13195588-13195632 6 sno FBtr0340488|FBtr0340489 13195497|13195497 13196279|13196279 AGAGGC 6mer3-8 dme-miR-282-5p X - 13195582 13195629 3'utr sno FlyBase G50540.1 AAGTTTAACCAACAGACATTGAGAGGCATCTGAATATAAGTTAAGAAA 10 13195610 0.954004645 3 10 51 1 1.176091259 0 0.4 0.6 10 0 0 15 X:13195582-13195629 6 11.5 2518 FBgn0265630 1551.576667 31.13333333 47.87666667 0.007411816 0.369379015 0.240200515 2 2 2 0.25 dme-miR-92b-3p 8mer-A1 GTGCAATA X 13263983 13263990 - X_13263983_13263990_- 0.627238069 0.627792542 0.627515305 0.00039202 HDAC4 FBtr0308576|FBtr0333331|FBtr0301299|FBtr0073798|FBtr0301298|FBtr0333333|FBtr0333332|FBtr0333334 13263753|13262685|13263753|13263753|13262887|13262887|13262887|13262887 13264981|13264981|13264981|13264981|13264981|13264981|13264981|13264981 X - 13263968 13264002 3'utr HDAC4 FlyBase G67160.1 AAAATATATATTGTGCAATAAATGTGAGAAAATGA 6 13263991 0.724042958 4 6 35 1 0.77815125 0.333333333 0 0 6 0 0 6 X:13263968-13264002 8 HDAC4 FBtr0333334|FBtr0333332|FBtr0333333|FBtr0301298|FBtr0073798|FBtr0301299|FBtr0333331|FBtr0308576 13262887|13262887|13262887|13262887|13263753|13263753|13262685|13263753 13264981|13264981|13264981|13264981|13264981|13264981|13264981|13264981 GTGCAATA 8mer-A1 dme-miR-92b-3p X - 13263970 13264004 3'utr HDAC4 FlyBase G50550.1 AAAAAATATATATTGTGCAATAAATGTGAGAAAAT 5 13263992 0.901998704 3 5 37 1 0.903089987 0 0.4 0.625 5 0 0 8 X:13263970-13264004 8 5.5 2519 FBgn0041210 5130.7 102.1166667 156.9133333 0.001071978 0.053859964 0.035051196 1 2 1.5 0.25 dme-miR-980-3p 6mer3-8 GGCAGC X 13287558 13287563 + X_13287558_13287563_+ 0.993122542 0.960061003 0.976591772 0.023378011 CG15743 FBtr0346123|FBtr0333330|FBtr0073755 13287493|13287493|13287493 13287741|13287741|13287741 X + 13287535 13287584 3'utr CG15743 FlyBase G61049.1 AATCCCCTCGCCCACATCGTTTAGGCAGCATTCAAAAATAGCTTTAAGTT 41 13287556 0.770775241 6 40 263 0.97826087 1.653212514 0.043478261 0.097560976 0.195652174 41 1 0 45 X:13287535-13287584 6 CG15743 FBtr0073755|FBtr0333330|FBtr0346123 13287493|13287493|13287493 13287741|13287741|13287741 GGCAGC 6mer3-8 dme-miR-980-3p X + 13287516 13287577 3'utr CG15743 FlyBase G46096.1 TTCTAACCCTTCCCGAGGAAATCCCCTCGCCCACATCGTTTAGGCAGCATTCAAAAATAGCT 29 13287556 0.978587066 5 29 184 1 1.69019608 0 0.448275862 0.673469388 29 0 0 49 X:13287516-13287577 6 33 2520 FBgn0030465 244.6633333 20.01333333 30.50666667 0.134879222 1.648900733 1.081730769 2 2 2 0.25 dme-miR-307a-3p 7mer-m8 GGTTGTG X 13287661 13287667 + X_13287661_13287667_+ 0.623605217 0.622502459 0.623053838 0.000779727 CG15743 FBtr0346123|FBtr0333330|FBtr0073755 13287493|13287493|13287493 13287741|13287741|13287741 X + 13287652 13287686 3'utr CG15743 FlyBase G61050.1 AATTACGTTGGTTGTGCGGCGGCGCGGCGGGGTCA 19 13287660 0.712804762 2 17 115 0.818181818 1.255272505 0.318181818 0.105263158 0.227272727 19 4 0 18 X:13287652-13287686 7 CG15743 FBtr0073755|FBtr0333330|FBtr0346123 13287493|13287493|13287493 13287741|13287741|13287741 GGTTGTG 7mer-m8 dme-miR-307a-3p X + 13287652 13287711 3'utr CG15743 FlyBase G46098.1 AATTACGTTGGTTGTGCGGCGGCGCGGCGGGGTCATGAACCCGGACCAAACCAAACCGCC 12 13287660 0.966796712 2 12 62 1 1.230448921 0.352941176 0.25 0.470588235 12 0 0 17 X:13287652-13287711 7 14.5 2521 FBgn0030465 244.6633333 20.01333333 30.50666667 0.059265113 0.724516989 0.475305944 1 1 1 0.25 dme-miR-1012-3p 6mer2-7 TGACTA X 13294202 13294207 + X_13294202_13294207_+ 0.979466597 0.938487737 0.958977167 0.028976458 CG15744 FBtr0073756 13293877 13294433 X + 13294088 13294221 3'utr CG15744 FlyBase G61056.1 ATATATATATATATGTATATATATGGGCAGTGGGCTTATATCTTAAGTTTCGCCCACTTAAAACCTAGCCAGCTAACTGAACTTGTAATTATAGTAAGGACTCCCTATTTATTATGACTAGTATTACTCCACAA 26 13294172 0.981870038 15 26 202 1 1.462397998 0.103448276 0.115384615 0.206896552 26 0 0 29 X:13294088-13294221 6 CG15744 FBtr0073756 13293877 13294433 TGACTA 6mer2-7 dme-miR-1012-3p X + 13294125 13294215 3'utr CG15744 FlyBase G46102.1 ATATCTTAAGTTTCGCCCACTTAAAACCTAGCCAGCTAACTGAACTTGTAATTATAGTAAGGACTCCCTATTTATTATGACTAGTATTACT 13 13294176 0.984352706 9 12 92 0.875 1.146128036 0.0625 0.230769231 0.375 13 2 0 14 X:13294125-13294215 6 5 2522 FBgn0030466 1200.416667 23.08666667 35.35 0.00416522 0.216575224 0.141442716 30 26 28 0.25 dme-miR-13b-2-5p 8mer-m1 TTTGACGC X 13294772 13294779 - X_13294772_13294779_- 0.597730824 0.475959933 0.536845378 0.086105029 CG1764 FBtr0339946|FBtr0073796 13294471|13294485 13294970|13294970 X - 13294706 13294872 3'utr CG1764 FlyBase G67187.1 CCCTGCTCTGTCCAGGCATCAGCAAAATTGTATTATCTTATTATAGTTTATACACACCATCTCTTGTTATTGTTACACAATTAAGATTAAACCTTTGACGCTAATCAAACTGATTGTCGCTGAGGCGTCGCTGCTGTTACTTTCCAGCTCATTGTTATTTTATAGGT 41 13294808 0.987971222 19 39 358 0.94 1.672097858 0.06 0.170731707 0.32 41 3 0 47 X:13294706-13294872 8 CG1764 FBtr0339946|FBtr0073796 13294471|13294485 13294970|13294970 TTTGACGC 8mer-m1 dme-miR-13b-2-5p X - 13294679 13294854 3'utr CG1764 FlyBase G50579.1 TCAGCAAAATTGTATTATCTTATTATAGTTTATACACACCATCTCTTGTTATTGTTACACAATTAAGATTAAACCTTTGACGCTAATCAAACTGATTGTCGCTGAGGCGTCGCTGCTGTTACTTTCCAGCTCATTGTTATTTTATAGGTTGTGTAATTCAATCAGAGTTGGAAAGT 32 13294758 0.982148016 12 30 233 0.955555556 1.633468456 0.066666667 0.3125 0.511111111 32 2 0 43 X:13294679-13294854 8 9 2523 FBgn0030467 288.8666667 25.22333333 38.49333333 0.031156243 0.356812475 0.23380672 29 -21 4 0.25 dme-miR-14-3p 8mer-A1 AAGACTGA X 13328933 13328940 + X_13328933_13328940_+ 0.642635881 0.63953404 0.641084961 0.002193375 IP3K2 FBtr0344168|FBtr0344171|FBtr0344170|FBtr0346133|FBtr0346134|FBtr0344169 13328764|13328764|13328764|13328764|13328764|13328764 13329069|13329303|13329303|13329303|13329303|13329303 X + 13328908 13328965 3'utr IP3K2 FlyBase G61091.1 ATTTAACCCCTTAAGTTTAAAATCAAAGACTGAAATCACAATATGCATACACATATTT 171 13328924 0.595304778 7 140 831 0.823232323 1.066059569 0.01010101 0.111111111 0.232323232 171 22 13 163 X:13328908-13328965 8 IP3K2 FBtr0344169|FBtr0346134|FBtr0346133|FBtr0344170|FBtr0344171|FBtr0344168 13328764|13328764|13328764|13328764|13328764|13328764 13329303|13329303|13329303|13329303|13329303|13329069 AAGACTGA 8mer-A1 dme-miR-14-3p X + 13328911 13328956 3'utr IP3K2 FlyBase G46128.1 TAACCCCTTAAGTTTAAAATCAAAGACTGAAATCACAATATGCATA 133 13328924 0.627803698 6 120 671 0.889473684 1.5289167 0 0.323308271 0.526315789 133 17 4 169 X:13328911-13328956 8 151.5 2524 FBgn0266375 946.9066667 46.57333333 71.42666667 0.159994649 3.25293444 2.121056562 9 9 9 0.25 dme-miR-184-3p 6mer2-7 CCGTCC X 13379599 13379604 + X_13379599_13379604_+ 0.992742711 0.878515084 0.935628897 0.080771111 CG1640 FBtr0073774|FBtr0073772|FBtr0073771|FBtr0073770|FBtr0073769|FBtr0339837|FBtr0073773 13379580|13379580|13379580|13379580|13379580|13379580|13379580 13380160|13380160|13380160|13380160|13380160|13380160|13380160 X + 13379576 13379650 stop_codon CG1640 FlyBase G61111.1 AAGTAGATCAGCTGCCAACTTCCCCGTCCTCGATCCCTGTGTTAAGTGTCAATCCTCCGGCTTAGGATTAAAAAT 45 13379608 0.759661754 15 40 308 0.907407407 1.389166084 0.12962963 0.2 0.333333333 45 4 1 49 X:13379576-13379650 6 CG1640 FBtr0339837|FBtr0073773|FBtr0073769|FBtr0073771|FBtr0073770|FBtr0073774|FBtr0073772 13379580|13379580|13379580|13379580|13379580|13379580|13379580 13380160|13380160|13380160|13380160|13380160|13380160|13380160 CCGTCC 6mer2-7 dme-miR-184-3p X + 13379569 13379653 stop_codon CG1640 FlyBase G46143.1 GAAGTACAAGTAGATCAGCTGCCAACTTCCCCGTCCTCGATCCCTGTGTTAAGTGTCAATCCTCCGGCTTAGGATTAAAAATTTA 30 13379609 0.765841305 11 27 225 0.904761905 1.579783597 0.261904762 0.366666667 0.547619048 30 4 0 38 X:13379569-13379653 6 26 2525 FBgn0030478 719.3333333 33.57333333 51.13 0.036144578 0.774424146 0.508507725 -9 -10 -9.5 0.25 dme-miR-184-3p 6mer3-8 TCCGTC X 13386369 13386374 - X_13386369_13386374_- 0.622395787 0.628075045 0.625235416 0.004015801 Yippee FBtr0100168 13385912 13386533 X - 13386332 13386390 stop_codon Yippee FlyBase G67205.1 CAGAGGCAGAGGGCTTTCCGTCGGAGGCCGCCACCACGAGTCATTGAGCCGATTGAATA 9 13386375 0.907862781 3 9 30 1 1 0.3 0.111111111 0.2 9 0 0 10 X:13386332-13386390 6 Yippee FBtr0100168 13385912 13386533 TCCGTC 6mer3-8 dme-miR-184-3p X - 13386335 13386388 stop_codon Yippee FlyBase G50597.1 GAGGCAGAGGGCTTTCCGTCGGAGGCCGCCACCACGAGTCATTGAGCCGATTGA 7 13386375 0.914543212 3 7 24 1 1 0.3 0.428571429 0.6 7 0 0 10 X:13386335-13386388 6 6.5 2526 FBgn0026749 336.1966667 36.58666667 56.19666667 0.019333922 0.17766035 0.115665223 1 1 1 0.25 dme-miR-980-3p 6mer3-8 GGCAGC X 13389129 13389134 + X_13389129_13389134_+ 0.995795697 0.94527874 0.970537219 0.035720913 CG1662 FBtr0342624 13388748 13389332 X + 13389106 13389142 3'utr CG1662 FlyBase G61117.1 TTTTCACCTGATAAGCTCTGCTTGGCAGCGGTCTTAA 10 13389127 0.649378848 4 9 66 0.923076923 0.77815125 0.307692308 0.3 0.461538462 10 0 1 12 X:13389106-13389142 6 CG1662 FBtr0342624 13388748 13389332 GGCAGC 6mer3-8 dme-miR-980-3p X + 13389109 13389139 3'utr CG1662 FlyBase G46148.1 TCACCTGATAAGCTCTGCTTGGCAGCGGTCT 8 13389127 0.71628303 3 6 42 0.727272727 0.602059991 0.181818182 0.375 0.545454545 8 2 1 8 X:13389109-13389139 6 9 2527 FBgn0030481 293.9633333 22.57333333 34.69666667 0.030616063 0.398700532 0.259390912 2 2 2 0.25 dme-miR-7-5p 6mer2-7 TCTTCC X 13409149 13409154 + X_13409149_13409154_+ 0.997999178 0.995580065 0.996789622 0.001710562 GstT4 FBtr0073778 13409034 13409323 X + 13409133 13409235 3'utr GstT4 FlyBase G61143.1 TTGTGATTATACTTGCTCTTCCTATCCAATAAGTCTTAGCCTTTCCATCACACTTGTTTTAACAATACCATTTGTGTCACGTAATGCTCATCTGTTTAAACGT 66 13409146 0.810226373 14 57 563 0.890243902 1.08517161 0.317073171 0.212121212 0.365853659 66 4 5 73 X:13409133-13409235 6 GstT4 FBtr0073778 13409034 13409323 TCTTCC 6mer2-7 dme-miR-7-5p X + 13409135 13409186 3'utr GstT4 FlyBase G46175.1 GTGATTATACTTGCTCTTCCTATCCAATAAGTCTTAGCCTTTCCATCACACT 27 13409146 0.708215918 9 25 238 0.9 1.255272505 0.05 0.37037037 0.575 27 3 1 36 X:13409135-13409186 6 26.5 2528 FBgn0030484 325.7333333 32.05333333 48.2 0.081354892 0.826747088 0.549792531 3 3 3 0.25 dme-miR-965-3p 8mer-A1 TACGCTTA X 13409307 13409314 + X_13409307_13409314_+ 0.57038401 0.590913847 0.580648929 0.014516761 GstT4 FBtr0073778 13409034 13409323 X + 13409251 13409325 3'utr GstT4 FlyBase G61144.1 AATCTTATATATAAACTTAGTTGTTAATTATGTATTTTAATTATTCGTATATAAAGTACGCTTATGTTTGTTTAA 47 13409307 0.989824585 7 43 431 0.95 1.45484486 0.183333333 0.255319149 0.416666667 47 2 1 57 X:13409251-13409325 8 GstT4 FBtr0073778 13409034 13409323 TACGCTTA 8mer-A1 dme-miR-965-3p X + 13409289 13409328 3'utr GstT4 FlyBase G46177.2 AATTATTCGTATATAAAGTACGCTTATGTTTGTTTAAATA 32 13409307 0.855569098 6 26 272 0.868421053 1.217483944 0.105263158 0.15625 0.289473684 32 4 1 33 X:13409289-13409328 8 37 2529 FBgn0030484 325.7333333 32.05333333 48.2 0.113589849 1.154326123 0.767634855 0 0 0 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 1350142 1350148 - X_1350142_1350148_- 0.499919115 0.703267285 0.6015932 0.143788891 CG12773 FBtr0070235|FBtr0070235|FBtr0070235|FBtr0342738|FBtr0342738|FBtr0342738|FBtr0332287|FBtr0332287|FBtr0332287 1349885|1349885|1349885|1349621|1349621|1349621|1349885|1349885|1349885 1350877|1350877|1350877|1350877|1350877|1350877|1350877|1350877|1350877 X - 1350127 1350162 3'utr CG12773 FlyBase G63979.1 TTCGAGGAGACATATGTGATACTGAGATAATAAGTG 19 1350140 0.777748911 3 17 97 0.962962963 1.414973348 0.518518519 0.263157895 0.481481481 19 1 0 26 X:1350127-1350162 7 CG12773 FBtr0332287|FBtr0332287|FBtr0332287|FBtr0342738|FBtr0342738|FBtr0342738|FBtr0070235|FBtr0070235|FBtr0070235 1349885|1349885|1349885|1349621|1349621|1349621|1349885|1349885|1349885 1350877|1350877|1350877|1350877|1350877|1350877|1350877|1350877|1350877 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 1350117 1350162 3'utr CG12773 FlyBase G48228.1 TTCGAGGAGACATATGTGATACTGAGATAATAAGTGAAACCAAAAC 17 1350140 0.925374563 3 17 93 1 1.361727836 0.47826087 0.352941176 0.52173913 17 0 0 23 X:1350117-1350162 7 18 2530 FBgn0024365 573.3566667 17.87333333 27.26333333 0.031394071 1.007086908 0.660227412 -8 -8 -8 0.25 dme-miR-276a-3p 6mer2-7 GTTCCT X 1350263 1350268 - X_1350263_1350268_- 0.892805097 0.507021542 0.69991332 0.2727902 CG12773 FBtr0070235|FBtr0342738|FBtr0332287 1349885|1349621|1349885 1350877|1350877|1350877 X - 1350223 1350281 3'utr CG12773 FlyBase G63980.1 ATTCTTTCGATGTGTTCCTTGCTCTCGTAGTTCTTCAACGATTACTCCTTAGTTGAGAG 10 1350262 0.867142976 4 9 99 0.923076923 1.079181246 0 0.3 0.461538462 10 1 0 12 X:1350223-1350281 6 CG12773 FBtr0332287|FBtr0342738|FBtr0070235 1349885|1349621|1349885 1350877|1350877|1350877 GTTCCT 6mer2-7 dme-miR-276a-3p X - 1350241 1350286 3'utr CG12773 FlyBase G48229.1 TTCGCATTCTTTCGATGTGTTCCTTGCTCTCGTAGTTCTTCAACGA 7 1350262 0.989628485 4 7 77 1 0.84509804 0 0 0 7 0 0 7 X:1350241-1350286 6 6.5 2531 FBgn0024365 573.3566667 17.87333333 27.26333333 0.011336748 0.363670272 0.238415454 -6 -6 -6 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 1350580 1350585 - X_1350580_1350585_- 0.990834659 0.742199346 0.866517003 0.175811777 CG12773 FBtr0070235|FBtr0070235|FBtr0070235|FBtr0342738|FBtr0342738|FBtr0342738|FBtr0332287|FBtr0332287|FBtr0332287 1349885|1349885|1349885|1349621|1349621|1349621|1349885|1349885|1349885 1350877|1350877|1350877|1350877|1350877|1350877|1350877|1350877|1350877 X - 1350424 1350682 3'utr CG12773 FlyBase G63982.1 TGTATTTGATGTATAGTTAGGATAGCGACAGCTGAGGTCACGATGGTAGTATTCCAAACTCGGTCTTAGTTCGTTTTGCTTTAACAAAATTTGGAGTCTGTGACGCATTTTAACTGGGACTCTCCCACGATGTAGTGCTTAGATAAGAAAATGTTGATAGTGTATTGATTTTTAGCTTTTTACTAGTTGTTAAAACGTTCGGAGGTCAGCCAAATCAGAGCACATTTCAGTTGCGGAGGCTCCATTCTGACCACAGCTG 29 1350592 0.981713208 19 28 224 0.96875 1.491361694 0.28125 0.103448276 0.1875 29 1 0 31 X:1350424-1350682 6 CG12773 FBtr0332287|FBtr0332287|FBtr0332287|FBtr0342738|FBtr0342738|FBtr0342738|FBtr0070235|FBtr0070235|FBtr0070235 1349885|1349885|1349885|1349621|1349621|1349621|1349885|1349885|1349885 1350877|1350877|1350877|1350877|1350877|1350877|1350877|1350877|1350877 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X - 1350568 1350610 3'utr CG12773 FlyBase G48231.1 GTTTTGCTTTAACAAAATTTGGAGTCTGTGACGCATTTTAACT 11 1350582 0.771061075 5 11 82 1 1.230448921 0.294117647 0.363636364 0.588235294 11 0 0 17 X:1350568-1350610 6 9 2532 FBgn0024365 573.3566667 17.87333333 27.26333333 0.015697036 0.503543454 0.330113706 7 -3 2 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA X 1356596 1356603 - X_1356596_1356603_- 0.497605285 0.495886911 0.496746098 0.001215092 png FBtr0070234 1356486 1356657 X - 1356536 1356629 3'utr png FlyBase G63997.1 GAGGAGACCTCAACAAATATTTCATTGTACTTAAGAACTAGGCTAGCTTAAGCGATAAATTAAGGTGTGTGCTGTGCTTTGTGTGCGCCTGTGC 20 1356604 0.989153272 7 19 183 0.956521739 1.342422681 0.043478261 0.1 0.217391304 20 1 0 22 X:1356536-1356629 8 png FBtr0070234 1356486 1356657 GTACTTAA 8mer-A1 dme-miR-252-5p X - 1356575 1356618 3'utr png FlyBase G48241.1 AACAAATATTTCATTGTACTTAAGAACTAGGCTAGCTTAAGCGA 7 1356604 0.703754787 4 7 54 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 X:1356575-1356618 8 11 2533 FBgn0000826 56.66666667 6.136666667 9.246666667 0.194117647 1.792504074 1.18961788 1 1 1 0.25 dme-miR-317-3p 7mer-A1 GTGTTCA X 13590874 13590880 + X_13590874_13590880_+ 0.757610505 0.670163192 0.713886848 0.061834579 Tango13 FBtr0310433|FBtr0333723|FBtr0310432 13590373|13589952|13589952 13593224|13591760|13591760 X + 13590846 13590891 3'utr Tango13 FlyBase G61163.1 TTACTATTACCTTGATTACCAGCTAATCGTGTTCAATTGATAAGCT 44 13590872 0.792006086 8 39 425 0.867924528 1.361727836 0.433962264 0.159090909 0.301886792 44 6 1 46 X:13590846-13590891 7 Tango13 FBtr0310432|FBtr0333723|FBtr0310433 13589952|13589952|13590373 13591760|13591760|13593224 GTGTTCA 7mer-A1 dme-miR-317-3p X + 13590829 13590892 3'utr Tango13 FlyBase G46192.1 TGAAATGGTCAGTACAATTACTATTACCTTGATTACCAGCTAATCGTGTTCAATTGATAAGCTA 45 13590872 0.776597679 11 33 431 0.777777778 1.799340549 0.580246914 0.488888889 0.716049383 45 18 0 63 X:13590829-13590892 7 40 2534 FBgn0086674 1960.31 48.50666667 74.51333333 0.020404936 0.824628917 0.536816677 2 2 2 0.25 dme-miR-14-3p 6mer3-8 AAGACT X 13660541 13660546 + X_13660541_13660546_+ 0.999768494 0.999530975 0.999649735 0.000167938 NFAT FBtr0301451 13658114 13661942 X + 13660491 13660578 3'utr NFAT FlyBase G61197.1 AGTGAAAGGCACTCGGATTTTACGGACCTCTCCCTTAGCAATCCCCTTCCAAGACTTATTCTCAGAAACCTGACCTAGGATTAAGAGG 14 13660549 0.98117135 8 13 99 0.933333333 1.146128036 0.4 0.071428571 0.133333333 14 1 0 14 X:13660491-13660578 6 NFAT FBtr0301451 13658114 13661942 AAGACT 6mer3-8 dme-miR-14-3p X + 13660513 13660564 3'utr NFAT FlyBase G46216.1 CGGACCTCTCCCTTAGCAATCCCCTTCCAAGACTTATTCTCAGAAACCTGAC 10 13660549 0.977973821 5 10 70 1 1.113943352 0.076923077 0.2 0.384615385 10 0 0 13 X:13660513-13660564 6 9.5 2535 FBgn0030505 2159.646667 45.51666667 69.65666667 0.004398868 0.208714756 0.136383213 -8 -8 -8 0.25 dme-miR-34-5p 7mer-A1 ACTGCCA X 13663145 13663151 + X_13663145_13663151_+ 0.724873084 0.725955596 0.72541434 0.000765443 NFAT FBtr0073808|FBtr0301450|FBtr0345127|FBtr0301449|FBtr0340396|FBtr0112980 13662758|13662758|13662758|13662758|13658114|13662758 13663657|13663657|13663657|13664568|13663657|13663657 X + 13663092 13663172 5'utr NFAT FlyBase G61209.1 AAAAAACAAATGATGAACTTATCTCAAAAGGTTAAATTAAAACAATGATAACGACTGCCATATACCTATGAAATATGAAGT 65 13663138 0.747232815 10 58 328 0.890243902 1.86332286 0.085365854 0.169230769 0.341463415 65 9 0 73 X:13663092-13663172 7 NFAT FBtr0301449|FBtr0340396|FBtr0112980|FBtr0073808|FBtr0301450|FBtr0345127 13662758|13658114|13662758|13662758|13662758|13662758 13664568|13663657|13663657|13663657|13663657|13663657 ACTGCCA 7mer-A1 dme-miR-34-5p X + 13663099 13663185 5'utr NFAT FlyBase G46224.1 AAATGATGAACTTATCTCAAAAGGTTAAATTAAAACAATGATAACGACTGCCATATACCTATGAAATATGAAGTGAAATCCCGAAAG 46 13663139 0.969119468 9 43 235 0.9375 1.477121255 0.09375 0.391304348 0.5625 46 3 1 60 X:13663099-13663185 7 35.5 2536 FBgn0030505 2159.646667 45.51666667 69.65666667 0.016437874 0.77993409 0.509642532 7 6 6.5 0.25 dme-miR-932-5p 6mer2-7 GAATTG X 13664246 13664251 + X_13664246_13664251_+ 0.999714094 0.99516031 0.997437202 0.003220023 NFAT FBtr0301449 13662758 13664568 X + 13664217 13664266 3'utr NFAT FlyBase G61214.2 GAGAGAGAGAGCGAAGAGCTCGCGCTTAAGAATTGTTAGTGTTAAATGTT 66 13664252 0.982067367 6 63 547 0.96 1.857332496 0.493333333 0.106060606 0.213333333 66 3 0 72 X:13664217-13664266 6 NFAT FBtr0301449 13662758 13664568 GAATTG 6mer2-7 dme-miR-932-5p X + 13664216 13664265 3'utr NFAT FlyBase G46229.1 AGAGAGAGAGAGCGAAGAGCTCGCGCTTAAGAATTGTTAGTGTTAAATGT 31 13664252 0.983544032 4 30 233 0.977777778 1.643452676 0.511111111 0.419354839 0.6 31 1 0 44 X:13664216-13664265 6 46 2537 FBgn0030505 2159.646667 45.51666667 69.65666667 0.021299781 1.010618821 0.660381873 -6 -6 -6 0.25 dme-miR-31a-5p 6mer3-8 TCTTGC X 13684305 13684310 + X_13684305_13684310_+ 0.796155361 0.884980422 0.840567891 0.06280876 CG11158 FBtr0073812 13684066 13684616 X + 13684284 13684319 3'utr CG11158 FlyBase G61216.1 CGAGTGATTGGCCAAATGATCTCTTGCATCACTATA 8 13684300 0.807112288 2 8 58 1 1.079181246 0.25 0.375 0.583333333 8 0 0 12 X:13684284-13684319 6 CG11158 FBtr0073812 13684066 13684616 TCTTGC 6mer3-8 dme-miR-31a-5p X + 13684282 13684317 3'utr CG11158 FlyBase G46230.1 TACGAGTGATTGGCCAAATGATCTCTTGCATCACTA 11 13684300 0.78245223 3 11 81 1 1.380211242 0 0.636363636 0.833333333 11 0 0 24 X:13684282-13684317 6 9.5 2538 FBgn0030511 119.0866667 8.99 13.68666667 0.079773834 1.0567297 0.694106186 5 5 5 0.25 dme-miR-1006-3p 6mer2-7 GAATTT X 13684451 13684456 - X_13684451_13684456_- 0.999316591 0.998445341 0.998880966 0.000616102 CG9940 FBtr0073844 13684378 13685808 X - 13684417 13684478 3'utr CG9940 FlyBase G67256.1 ATGTAGATTTATAGCACATTGTGAATTTGAACACTCGCATCAGATCGATTTAATGGAACACT 12 13684460 0.986281462 5 12 102 1 1.146128036 0.071428571 0.166666667 0.285714286 12 0 0 14 X:13684417-13684478 6 CG9940 FBtr0073844 13684378 13685808 GAATTT 6mer2-7 dme-miR-1006-3p X - 13684442 13684482 3'utr CG9940 FlyBase G50633.1 AAGCATGTAGATTTATAGCACATTGTGAATTTGAACACTCG 7 13684452 0.847391069 5 7 58 1 1.113943352 0 0.428571429 0.692307692 7 0 0 13 X:13684442-13684482 6 8.5 2539 FBgn0030512 1001.65 27.86666667 42.76666667 0.008485998 0.305023923 0.198752923 4 -4 0 0.25 dme-miR-307a-3p 7mer-m8 GGTTGTG X 13685072 13685078 - X_13685072_13685078_- 0.702946591 0.702895032 0.702920812 3.65E-05 CG9940 FBtr0343352|FBtr0073844|FBtr0073845 13684551|13684378|13684551 13685808|13685808|13685808 X - 13685060 13685087 3'utr CG9940 FlyBase G67258.1 TGTGTTATTGGTTGTGTACGGTGCGGCT 6 13685073 0.656934328 3 5 56 1 0.954242509 0.444444444 0.333333333 0.555555556 6 0 0 9 X:13685060-13685087 7 CG9940 FBtr0073845|FBtr0343352|FBtr0073844 13684551|13684551|13684378 13685808|13685808|13685808 GGTTGTG 7mer-m8 dme-miR-307a-3p X - 13685059 13685088 3'utr CG9940 FlyBase G50634.1 TTGTGTTATTGGTTGTGTACGGTGCGGCTT 5 13685079 0.739103348 2 3 45 0.5 0.602059991 0.125 0.4 0.625 5 4 0 4 X:13685059-13685088 7 5 2540 FBgn0030512 1001.65 27.86666667 42.76666667 0.004991764 0.179425837 0.116913484 -5 1 -2 0.25 dme-miR-79-3p 7mer-m8 TAGCTTT X 13719126 13719132 - X_13719126_13719132_- 0.619126263 0.619141018 0.619133641 1.04E-05 CG9941 FBtr0073843 13718732 13719175 X - 13719108 13719151 3'utr CG9941 FlyBase G67268.2 GAAATTCGTTTTCTCGTTTTAGCTTTGCGTTTATACTATTTATT 11 13719130 0.610710672 4 8 125 0.866666667 1.113943352 0.333333333 0.181818182 0.4 11 2 0 13 X:13719108-13719151 7 CG9941 FBtr0073843 13718732 13719175 TAGCTTT 7mer-m8 dme-miR-79-3p X - 13719086 13719145 3'utr CG9941 FlyBase G50639.1 CGTTTTCTCGTTTTAGCTTTGCGTTTATACTATTTATTCGGAGTTCACCTAGATTTAGTT 6 13719133 0.98966561 4 6 60 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 X:13719086-13719145 7 6.5 2541 FBgn0030514 1053.746667 41.08333333 63.20333333 0.006168466 0.15821501 0.102842677 -2 1 -0.5 0.25 dme-miR-79-3p 6mer2-7 AGCTTT X 13736887 13736892 - X_13736887_13736892_- 0.943774059 0.79249778 0.86813592 0.106968498 Grip91 FBtr0073841 13736568 13737101 X - 13736861 13736900 3'utr Grip91 FlyBase G67297.1 ATATCTCAAGCTTTGCCGTCAATCGCCTGGCTGCAAGCCA 13 13736887 0.677060716 5 13 74 1 1.230448921 0.117647059 0.230769231 0.411764706 13 0 0 17 X:13736861-13736900 6 Grip91 FBtr0073841 13736568 13737101 AGCTTT 6mer2-7 dme-miR-79-3p X - 13736822 13736892 3'utr Grip91 FlyBase G50656.1 AGCTTTGCCGTCAATCGCCTGGCTGCAAGCCATCAACTTAAGATATCTCCAATACAAAATTATTGAGTAGT 6 13736889 0.97645154 5 6 39 1 0.954242509 0 0.5 0.666666667 6 0 0 9 X:13736822-13736892 6 7.5 2542 FBgn0001612 613.5433333 20.81666667 31.92333333 0.012224075 0.360288231 0.234937872 -5 -3 -4 0.25 dme-miR-980-3p 6mer3-8 GGCAGC X 1373777 1373782 + X_1373777_1373782_+ 0.822856115 0.816547913 0.819702014 0.004460571 ssx FBtr0339773|FBtr0339774|FBtr0339772|FBtr0070215 1373350|1373114|1371989|1373114 1374677|1375257|1374677|1374677 X + 1373766 1373795 3'utr ssx FlyBase G57923.1 ATCCAAGCATTGGCAGCAAGAGGCAAAGCA 6 1373776 0.635036294 2 6 7 1 0.903089987 0.25 0.166666667 0.375 6 0 0 8 X:1373766-1373795 6 ssx FBtr0339772|FBtr0070215|FBtr0339773|FBtr0339774 1371989|1373114|1373350|1373114 1374677|1374677|1374677|1375257 GGCAGC 6mer3-8 dme-miR-980-3p X + 1373763 1373801 3'utr ssx FlyBase G43819.1 CAAATCCAAGCATTGGCAGCAAGAGGCAAAGCAAAGGTG 16 1373776 0.704403669 2 15 24 0.96 1.380211242 0.08 0.4375 0.64 16 1 0 24 X:1373763-1373801 6 11 2543 FBgn0024987 898.8266667 36.91666667 56.86333333 0.012238177 0.297968397 0.193446275 1 1 1 0.25 dme-miR-2535b-3p 8mer-A1 CCGTGAGA X 1374558 1374565 + X_1374558_1374565_+ 0.525029849 0.59343306 0.559231454 0.048368437 ssx FBtr0339773|FBtr0339774|FBtr0339772|FBtr0070215 1373350|1373114|1371989|1373114 1374677|1375257|1374677|1374677 X + 1374454 1374582 3'utr ssx FlyBase G57928.1 ATGAATGATGTATAAATACCCGAACTTCGGGTAAACTTCCAACAGAAACCCGACAAGAAGATGGCTGAATATGAAATAAACTTGAAATTTTCCAACCAGCATACCCGTGAGACCCAGAGGTCCGAAATT 36 1374555 0.964340804 9 36 119 1 1.643452676 0.25 0.166666667 0.318181818 36 0 0 44 X:1374454-1374582 8 ssx FBtr0339772|FBtr0070215|FBtr0339773|FBtr0339774 1371989|1373114|1373350|1373114 1374677|1374677|1374677|1375257 CCGTGAGA 8mer-A1 dme-miR-2535b-3p X + 1374537 1374579 3'utr ssx FlyBase G43824.1 GAAATTTTCCAACCAGCATACCCGTGAGACCCAGAGGTCCGAA 14 1374555 0.837149664 3 11 36 0.8 1.204119983 0.05 0.357142857 0.55 14 4 0 16 X:1374537-1374579 8 16 2544 FBgn0024987 898.8266667 36.91666667 56.86333333 0.017800985 0.433408578 0.2813764 3 3 3 0.25 dme-miR-1012-3p 6mer3-8 TTGACT X 13745971 13745976 - X_13745971_13745976_- 0.894658539 0.876565616 0.885612078 0.012793612 Pdcd4 FBtr0331711|FBtr0331712|FBtr0112981 13745575|13745575|13745575 13746775|13746775|13746775 X - 13745958 13746027 3'utr Pdcd4 FlyBase G67310.1 TTATGCTATCAACGCAATCAAAACTCTGATGATTACACAAAACAAATTCCATTGACTTGAAATTGAGAAA 19 13745976 0.973292224 8 18 110 0.956521739 1.342422681 0.043478261 0.210526316 0.347826087 19 1 0 22 X:13745958-13746027 6 Pdcd4 FBtr0112981|FBtr0331712|FBtr0331711 13745575|13745575|13745575 13746775|13746775|13746775 TTGACT 6mer3-8 dme-miR-1012-3p X - 13745963 13746013 3'utr Pdcd4 FlyBase G50665.1 CAATCAAAACTCTGATGATTACACAAAACAAATTCCATTGACTTGAAATTG 12 13745979 0.756968307 7 12 67 1 1.278753601 0 0.25 0.526315789 12 0 0 19 X:13745963-13746013 6 10 2545 FBgn0030520 6370.806667 230.15 350.2466667 0.00156966 0.043449924 0.028551307 0 3 1.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC X 1374620 1374625 + X_1374620_1374625_+ 0.995157537 0.995960816 0.995559176 0.000568019 ssx FBtr0339773|FBtr0339774|FBtr0339772|FBtr0070215 1373350|1373114|1371989|1373114 1374677|1375257|1374677|1374677 X + 1374606 1374660 3'utr ssx FlyBase G57929.1 TCTAAACGTAAATCCTAGTCTCGTAGCAATATCATAGTTAAGGTGACTTTTTTTT 15 1374618 0.722758516 5 14 108 0.952380952 1.301029996 0.238095238 0.2 0.428571429 15 1 0 20 X:1374606-1374660 6 ssx FBtr0339772|FBtr0070215|FBtr0339773|FBtr0339774 1371989|1373114|1373350|1373114 1374677|1374677|1374677|1375257 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" X + 1374584 1374649 3'utr ssx FlyBase G43825.1 TTTTTTTTTAGTATTGATAATCTCTAAACGTAAATCCTAGTCTCGTAGCAATATCATAGTTAAGGT 11 1374626 0.985095887 4 9 80 0.833333333 1.176091259 0.166666667 0.545454545 0.722222222 11 3 0 15 X:1374584-1374649 6 10 2546 FBgn0024987 898.8266667 36.91666667 56.86333333 0.011125616 0.270880361 0.17586025 2 -6 -2 0.25 dme-bantam-3p 7mer-m8 TGATCTC X 13746439 13746445 - X_13746439_13746445_- 0.552098063 0.587843202 0.569970633 0.025275603 Pdcd4 FBtr0331711|FBtr0331712|FBtr0112981 13745575|13745575|13745575 13746775|13746775|13746775 X - 13746421 13746471 3'utr Pdcd4 FlyBase G67313.2 AAAAAAACAAACAATCAATCGGAATTTGATCTCCGTTTAAACTATATTCAT 243 13746446 0.79898818 11 230 2021 0.962068966 1.968482949 0.065517241 0.164609053 0.3 243 9 2 279 X:13746421-13746471 7 Pdcd4 FBtr0112981|FBtr0331712|FBtr0331711 13745575|13745575|13745575 13746775|13746775|13746775 TGATCTC 7mer-m8 dme-bantam-3p X - 13746389 13746469 3'utr Pdcd4 FlyBase G50669.1 AAAAACAAACAATCAATCGGAATTTGATCTCCGTTTAAACTATATTCATTATTATACTACATAAACACCTACAACGTATAT 169 13746446 0.985687804 11 166 1380 0.966942149 2.369215857 0.074380165 0.349112426 0.545454545 169 8 0 234 X:13746389-13746469 7 201.5 2547 FBgn0030520 6370.806667 230.15 350.2466667 0.031628648 0.875515968 0.57530883 1 1 1 0.25 dme-miR-317-3p 6mer3-8 TGTGTT X 13774084 13774089 + X_13774084_13774089_+ 0.973040245 0.95405968 0.963549963 0.01342124 rdgB FBtr0301532 13773981 13775189 X + 13774000 13774106 3'utr rdgB FlyBase G61262.1 CTGGCGCTGCTAGAGACGATCCACTGTACAGAGCGCACCCACTGTAACGCCCGATCCTCGCTGTGTATATATGTATCCTGTGTTTGTGTTTAGTGTAAATAGGTCAA 8 13774085 0.991785123 5 6 64 0.888888889 0.903089987 0.111111111 0.125 0.222222222 8 1 0 8 X:13774000-13774106 6 rdgB FBtr0301532 13773981 13775189 TGTGTT 6mer3-8 dme-miR-317-3p X + 13774029 13774107 3'utr rdgB FlyBase G46264.1 AGAGCGCACCCACTGTAACGCCCGATCCTCGCTGTGTATATATGTATCCTGTGTTTGTGTTTAGTGTAAATAGGTCAAC 9 13774083 0.988262605 7 8 75 0.875 1.146128036 0.5625 0.666666667 0.8125 9 2 0 14 X:13774029-13774107 6 5 2548 FBgn0003218 381.5 8.42 12.83 0.01310616 0.593824228 0.389711613 -1 1 0 0.25 dme-miR-8-3p 6mer2-7 AGTATT X 13780036 13780041 - X_13780036_13780041_- 0.974058965 0.985762898 0.979910931 0.008275907 CtsB1 FBtr0073838|FBtr0346091 13780014|13779845 13780176|13780176 X - 13780015 13780130 3'utr CtsB1 FlyBase G67327.1 ATTTTCTATCATCCCTCCTTTTATTTTCATTCCGATTCGCAACTGACGTTTGTAGTTAATGTAAACAACCTAAACCTGATTGATAATAAAGTATTGTATATGACTGTGGAACTGTA 221 13780060 0.897414174 26 207 1495 0.925531915 1.51355052 0.088652482 0.20361991 0.375886525 221 14 7 261 X:13780015-13780130 6 CtsB1 FBtr0346091|FBtr0073838 13779845|13780014 13780176|13780176 AGTATT 6mer2-7 dme-miR-8-3p X - 13780015 13780130 3'utr CtsB1 FlyBase G50687.1 ATTTTCTATCATCCCTCCTTTTATTTTCATTCCGATTCGCAACTGACGTTTGTAGTTAATGTAAACAACCTAAACCTGATTGATAATAAAGTATTGTATATGACTGTGGAACTGTA 136 13780051 0.81546364 23 128 896 0.930348259 2.271841607 0.084577114 0.338235294 0.552238806 136 14 0 187 X:13780015-13780130 6 76.5 2549 FBgn0030521 559.3 47.37666667 71.83333333 0.136778116 1.614718919 1.064965197 19 10 14.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 13807165 13807171 + X_13807165_13807171_+ 0.661003561 0.661614889 0.661309225 0.000432254 inaE FBtr0073826 13805478 13807627 X + 13807148 13807187 3'utr inaE FlyBase G61282.1 AATTATGTTAAACGTTATCTAGTCTAAGGCCAACTATCGC 7 13807172 0.973002182 4 7 45 1 0.84509804 0 0 0 7 0 0 7 X:13807148-13807187 7 inaE FBtr0073826 13805478 13807627 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X + 13807152 13807187 3'utr inaE FlyBase G46278.1 ATGTTAAACGTTATCTAGTCTAAGGCCAACTATCGC 5 13807172 0.970308173 3 4 29 1 0.903089987 0 0.4 0.625 5 0 0 8 X:13807152-13807187 7 5 2550 FBgn0261244 812.34 24.45 37.46 0.006155058 0.204498978 0.133475707 -7 -7 -7 0.25 dme-miR-305-5p 8mer-m1 AGTACAAT X 13832301 13832308 - X_13832301_13832308_- 0.535616509 0.570318675 0.552967592 0.024538161 AMPdeam FBtr0309245 13830739 13834641 X - 13832279 13832366 5'utr AMPdeam FlyBase G67376.1 ATGTTGGACGTCCATGCCGATCGCAACACGTTCCATCGCTTCGACAAGTTTAACTCCAAGTACAATCCCATCGGGGAGTCGCGGCTCA 17 13832302 0.847476229 7 13 83 0.789473684 0.698970004 0.157894737 0.058823529 0.157894737 17 2 2 15 X:13832279-13832366 8 AMPdeam FBtr0309245 13830739 13834641 AGTACAAT 8mer-m1 dme-miR-305-5p X - 13832224 13832320 5'utr AMPdeam FlyBase G50726.1 AGTTTAACTCCAAGTACAATCCCATCGGGGAGTCGCGGCTCAGGGAAGTCTTCCTGAAGACGGACAACTATCTGAATGGCAAATACTTTGCACAGAT 12 13832297 0.957759835 9 12 60 1 1.278753601 0 0.416666667 0.631578947 12 0 0 19 X:13832224-13832320 8 7.5 2551 FBgn0052626 1047.716667 41.85666667 63.94666667 0.007158424 0.179182926 0.117285238 -6 -11 -8.5 0.25 dme-miR-1008-3p 7mer-m8 AGCTGTG X 13851202 13851208 - X_13851202_13851208_- 0.625274947 0.630877537 0.628076242 0.003961636 mamo FBtr0346001|FBtr0346002 13846114|13850846 13854098|13854098 X - 13851188 13851222 3'utr mamo FlyBase G67389.1 AACAACAAGCTGTGAGCTGTGTATGTGAATGAATT 7 13851195 0.818136081 6 7 43 1 0.903089987 0.375 0.142857143 0.25 7 0 0 8 X:13851188-13851222 7 mamo FBtr0346001|FBtr0346002 13846114|13850846 13854098|13854098 AGCTGTG 7mer-m8 dme-miR-1008-3p X - 13851189 13851231 3'utr mamo FlyBase G50738.1 AACAACAACAACAACAAGCTGTGAGCTGTGTATGTGAATGAAT 5 13851205 0.958484462 3 5 27 1 0.77815125 0 0.2 0.333333333 5 0 0 6 X:13851189-13851231 7 6 2552 FBgn0267033 6198.503333 82.32 126.9666667 0.000967976 0.072886297 0.047256498 -13 -3 -8 0.25 dme-miR-305-5p 7mer-A1 GTACAAA X 13853450 13853456 - X_13853450_13853456_- 0.780399368 0.766186796 0.773293082 0.010049826 mamo FBtr0346001|FBtr0346002 13846114|13850846 13854098|13854098 X - 13853443 13853493 3'utr mamo FlyBase G67397.1 TTTACACCGATCTATAGAAGCTAACTAGCAACAATTTGTACAAAACAAACA 17 13853458 0.879365182 4 17 80 1 1.255272505 0.055555556 0.058823529 0.111111111 17 0 0 18 X:13853443-13853493 7 mamo FBtr0346001|FBtr0346002 13846114|13850846 13854098|13854098 GTACAAA 7mer-A1 dme-miR-305-5p X - 13853444 13853491 3'utr mamo FlyBase G50744.1 TACACCGATCTATAGAAGCTAACTAGCAACAATTTGTACAAAACAAAC 10 13853458 0.937335942 4 10 43 1 1.176091259 0 0.3 0.533333333 10 0 0 15 X:13853444-13853491 7 8.5 2553 FBgn0267033 6198.503333 82.32 126.9666667 0.001371299 0.103255588 0.066946705 2 2 2 0.25 dme-miR-1008-3p 7mer-A1 GCTGTGA X 13866926 13866932 - X_13866926_13866932_- 0.812340932 0.812545434 0.812443183 0.000144603 mamo FBtr0346003|FBtr0346006 13858015|13865860 13869553|13869553 X - 13866900 13866957 5'utr mamo FlyBase G67404.1 AAAAACTTTTGGATTAAACAATTTGGCTGTGATAGCATTACAAGAATAGTAAATAATT 71 13866934 0.985963621 9 68 568 0.964285714 1.908485019 0.071428571 0.154929577 0.285714286 71 3 0 81 X:13866900-13866957 7 mamo FBtr0346003|FBtr0346006 13858015|13865860 13869553|13869553 GCTGTGA 7mer-A1 dme-miR-1008-3p X - 13866900 13866949 5'utr mamo FlyBase G50747.1 TTGGATTAAACAATTTGGCTGTGATAGCATTACAAGAATAGTAAATAATT 38 13866934 0.869907644 8 35 255 0.9 1.176091259 0.18 0.263157895 0.44 38 3 2 45 X:13866900-13866949 7 53 2554 FBgn0267033 6198.503333 82.32 126.9666667 0.008550451 0.64382896 0.417432397 2 2 2 0.25 dme-bantam-3p 7mer-A1 GATCTCA X 13867332 13867338 - X_13867332_13867338_- 0.675931363 0.818443311 0.747187337 0.100771131 mamo FBtr0346003|FBtr0346006 13858015|13865860 13869553|13869553 X - 13867313 13867352 5'utr mamo FlyBase G67405.1 AAGAAATGCAAATCGATCTCAAAATTATAAACAAATGAAA 47 13867340 0.841370012 4 46 221 0.964285714 1.73239376 0.142857143 0.14893617 0.285714286 47 2 0 54 X:13867313-13867352 7 mamo FBtr0346003|FBtr0346006 13858015|13865860 13869553|13869553 GATCTCA 7mer-A1 dme-bantam-3p X - 13867320 13867393 5'utr mamo FlyBase G50748.1 ACTTAGGTGATTAGCCCGGCAACAACAGCAAACGAAACAACAAGAAATGCAAATCGATCTCAAAATTATAAACA 22 13867345 0.961314377 4 22 109 1 1.491361694 0.161290323 0.272727273 0.483870968 22 0 0 31 X:13867320-13867393 7 33.5 2555 FBgn0267033 6198.503333 82.32 126.9666667 0.00540453 0.406948494 0.263848779 2 7 4.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-m8 CTGTGAT X 13867828 13867834 - X_13867828_13867834_- 0.532585148 0.508667826 0.520626487 0.016912085 mamo FBtr0346003|FBtr0346003|FBtr0346003|FBtr0346006|FBtr0346006|FBtr0346006 13858015|13858015|13858015|13865860|13865860|13865860 13869553|13869553|13869553|13869553|13869553|13869553 X - 13867806 13867864 5'utr mamo FlyBase G67406.1 AAGCAGCAGCAGCAGAATTACATAGAATATCTGTGATCTTAACGATATTTATAAAAAAC 126 13867835 0.987236358 7 118 1070 0.937062937 2.127104798 0.111888112 0.119047619 0.223776224 126 9 0 134 X:13867806-13867864 7 mamo FBtr0346003|FBtr0346003|FBtr0346003|FBtr0346006|FBtr0346006|FBtr0346006 13858015|13858015|13858015|13865860|13865860|13865860 13869553|13869553|13869553|13869553|13869553|13869553 CTGTGAT 7mer-m8 "dme-miR-2a-3p,dme-miR-2b-3p" X - 13867808 13867858 5'utr mamo FlyBase G50749.1 CAGCAGCAGAATTACATAGAATATCTGTGATCTTAACGATATTTATAAAAA 88 13867835 0.738477231 5 84 749 0.971223022 1.829303773 0.115107914 0.420454545 0.633093525 88 3 1 135 X:13867808-13867858 7 105.5 2556 FBgn0267033 6198.503333 82.32 126.9666667 0.017020238 1.281584062 0.830926752 1 1 1 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA X 1392563 1392570 + X_1392563_1392570_+ 0.423991184 0.451611855 0.43780152 0.019530784 CG32813 FBtr0330319|FBtr0070222|FBtr0342737|FBtr0342736|FBtr0070219|FBtr0330317|FBtr0330320|FBtr0342735 1391564|1391564|1391564|1391564|1391564|1391564|1391564|1391564 1392843|1392843|1392843|1392843|1392843|1392843|1392843|1392843 X + 1392537 1392581 3'utr CG32813 FlyBase G57945.1 CATTGAAGGAACTGTAGCTAATTTATGTACTTAATGAACCAGTGA 26 1392562 0.752432733 2 26 255 1 1.462397998 0.172413793 0.115384615 0.206896552 26 0 0 29 X:1392537-1392581 8 CG32813 FBtr0342737|FBtr0330319|FBtr0342736|FBtr0330320|FBtr0070222|FBtr0330317|FBtr0070219|FBtr0342735 1391564|1391564|1391564|1391564|1391564|1391564|1391564|1391564 1392843|1392843|1392843|1392843|1392843|1392843|1392843|1392843 GTACTTAA 8mer-A1 dme-miR-252-5p X + 1392540 1392583 3'utr CG32813 FlyBase G43842.1 TGAAGGAACTGTAGCTAATTTATGTACTTAATGAACCAGTGAAA 22 1392562 0.72588109 3 22 203 1 1.568201724 0.108108108 0.363636364 0.621621622 22 0 0 37 X:1392540-1392583 8 24 2557 FBgn0052813 73.22 2.636666667 4.1 0.327779295 9.102402023 5.853658537 1 1 1 0.25 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC X 1392625 1392630 + X_1392625_1392630_+ 0.865174794 0.867915614 0.866545204 0.001938038 CG32813 FBtr0330319|FBtr0070222|FBtr0342737|FBtr0342736|FBtr0070219|FBtr0330317|FBtr0330320|FBtr0342735 1391564|1391564|1391564|1391564|1391564|1391564|1391564|1391564 1392843|1392843|1392843|1392843|1392843|1392843|1392843|1392843 X + 1392604 1392667 3'utr CG32813 FlyBase G57946.1 GGTGTAAAGAGAAGAAACTTGCTAGTCGCCGCTGCATAACTGTGTAAATGTGGCACACAAACCA 22 1392623 0.946083067 3 21 90 0.962962963 1.414973348 0.444444444 0.227272727 0.37037037 22 1 0 26 X:1392604-1392667 6 CG32813 FBtr0342737|FBtr0330319|FBtr0342736|FBtr0330320|FBtr0070222|FBtr0330317|FBtr0070219|FBtr0342735 1391564|1391564|1391564|1391564|1391564|1391564|1391564|1391564 1392843|1392843|1392843|1392843|1392843|1392843|1392843|1392843 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" X + 1392603 1392640 3'utr CG32813 FlyBase G43843.1 TGGTGTAAAGAGAAGAAACTTGCTAGTCGCCGCTGCAT 11 1392623 0.937397908 2 11 45 1 1.176091259 0.6 0.181818182 0.4 11 0 0 15 X:1392603-1392640 6 16 2558 FBgn0052813 73.22 2.636666667 4.1 0.21851953 6.068268015 3.902439024 2 2 2 0.25 dme-miR-34-5p 7mer-m8 CACTGCC X 1395468 1395474 + X_1395468_1395474_+ 0.673966226 0.695650949 0.684808587 0.015333398 CG11448 FBtr0332291|FBtr0070225 1395374|1395374 1397337|1397337 X + 1395397 1395496 3'utr CG11448 FlyBase G57951.1 TTGGCGTGCATTTCACTTTTCGTTTGTTTTCTGTTTTTCCGTTTCCGTTCCATTCCGTTCCGTTCCGTTTGCACTGCCCCCCGCACCCCTGCATCTTGCA 192 1395450 0.99058932 17 185 1899 0.948497854 1.566241023 0.201716738 0.1875 0.330472103 192 7 5 221 X:1395397-1395496 7 CG11448 FBtr0070225|FBtr0332291 1395374|1395374 1397337|1397337 CACTGCC 7mer-m8 dme-miR-34-5p X + 1395394 1395494 3'utr CG11448 FlyBase G43848.1 GAGTTGGCGTGCATTTCACTTTTCGTTTGTTTTCTGTTTTTCCGTTTCCGTTCCATTCCGTTCCGTTCCGTTTGCACTGCCCCCCGCACCCCTGCATCTTG 142 1395450 0.990163311 15 133 1333 0.936651584 1.713910354 0.199095023 0.401408451 0.615384615 142 11 3 207 X:1395394-1395494 7 46 2559 FBgn0024985 122.6666667 3.986666667 6.07 0.375 11.53846154 7.578253707 18 18 18 0.25 dme-miR-305-3p 6mer2-7 TGTGCC X 1395641 1395646 + X_1395641_1395646_+ 0.54891824 0.549691585 0.549304912 0.000546876 CG11448 FBtr0332291|FBtr0070225 1395374|1395374 1397337|1397337 X + 1395526 1395665 3'utr CG11448 FlyBase G57952.1 ACGTCTTACGATTACGTTTACATTTAGTTTAGGCAACAGCCTGTATCTGACCCTGTCCCTCGCCATTCACCTGCTCCGCCTGAGCTGTACATACATAGTTTACACACTCGATTGCTGTGCCCTCATAATTCTAAGTTGTT 1174 1395637 0.923214846 21 1166 9428 0.993621545 2.845718018 0.029057406 0.160988075 0.301913536 1174 8 1 1402 X:1395526-1395665 6 CG11448 FBtr0070225|FBtr0332291 1395374|1395374 1397337|1397337 TGTGCC 6mer2-7 dme-miR-305-3p X + 1395526 1395664 3'utr CG11448 FlyBase G43849.1 ACGTCTTACGATTACGTTTACATTTAGTTTAGGCAACAGCCTGTATCTGACCCTGTCCCTCGCCATTCACCTGCTCCGCCTGAGCTGTACATACATAGTTTACACACTCGATTGCTGTGCCCTCATAATTCTAAGTTGT 807 1395637 0.90858251 22 799 6322 0.990909091 2.514547753 0.028030303 0.416356877 0.643181818 807 9 3 1308 X:1395526-1395664 6 945 2560 FBgn0024985 122.6666667 3.986666667 6.07 7.703804348 237.0401338 155.6836903 4 4 4 0.25 dme-miR-8-3p 6mer2-7 AGTATT X 1396976 1396981 + X_1396976_1396981_+ 0.997745636 0.981395318 0.989570477 0.011561408 CG11448 FBtr0332292|FBtr0332291|FBtr0070225 1395684|1395374|1395374 1397337|1397337|1397337 X + 1396953 1397059 3'utr CG11448 FlyBase G57961.1 GAAAAGAAGATGGAGAGAAATTGAGTATTTGGTGAATTAATGTTAACTAAATTTATATACACATATACACATGCATTATACATAATATACTTTACTATATACTATGT 41 1396974 0.982932592 17 40 307 0.98 1.69019608 0.18 0.170731707 0.32 41 1 0 49 X:1396953-1397059 6 CG11448 FBtr0070225|FBtr0332291|FBtr0332292 1395374|1395374|1395684 1397337|1397337|1397337 AGTATT 6mer2-7 dme-miR-8-3p X + 1396956 1397012 3'utr CG11448 FlyBase G43855.1 AAGAAGATGGAGAGAAATTGAGTATTTGGTGAATTAATGTTAACTAAATTTATATAC 31 1396974 0.7763504 10 28 264 0.905660377 1.681241237 0.113207547 0.548387097 0.735849057 31 5 0 48 X:1396956-1397012 6 29.5 2561 FBgn0024985 122.6666667 3.986666667 6.07 0.24048913 7.399665552 4.859967051 2 2 2 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 13999271 13999276 + X_13999271_13999276_+ 0.728442128 0.729216515 0.728829321 0.000547583 ben FBtr0307296|FBtr0307296|FBtr0307296|FBtr0332844|FBtr0332844|FBtr0332844|FBtr0073855|FBtr0073855|FBtr0073855|FBtr0332843|FBtr0332843|FBtr0332843 13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615 13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805 X + 13999254 13999295 3'utr ben FlyBase G61311.1 TTTCAGAAAATTTAAGATGTGATCGTCCAACTTGTAGACTTT 10 13999266 0.888634882 5 8 77 0.916666667 1.041392685 0 0.2 0.333333333 10 1 0 11 X:13999254-13999295 6 ben FBtr0332843|FBtr0332843|FBtr0332843|FBtr0332844|FBtr0332844|FBtr0332844|FBtr0073855|FBtr0073855|FBtr0073855|FBtr0307296|FBtr0307296|FBtr0307296 13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615|13998615 13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805|13999805 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X + 13999257 13999298 3'utr ben FlyBase G46304.1 CAGAAAATTTAAGATGTGATCGTCCAACTTGTAGACTTTACT 9 13999267 0.850713566 5 9 61 1 1.230448921 0.176470588 0.666666667 0.823529412 9 0 0 17 X:13999257-13999298 6 8.5 2562 FBgn0000173 1034.81 74.77333333 113.92 0.008214068 0.11367689 0.074613764 5 4 4.5 0.25 dme-miR-1006-3p 7mer-A1 GAATTTA X 14232321 14232327 - X_14232321_14232327_- 0.751033212 0.799740952 0.775387082 0.034441616 CG42271 FBtr0299614 14232280 14232720 X - 14232315 14232386 3'utr CG42271 FlyBase G67433.1 TGTAAACTTATGTGTAATCCCATCGGGAGCTGGTGTTGCATTGCGTTCCATGTGATTATGAATTTATTCTTG 8 14232330 0.99184049 5 7 72 0.888888889 0.903089987 0.333333333 0.125 0.222222222 8 1 0 8 X:14232315-14232386 7 CG42271 FBtr0299614 14232280 14232720 GAATTTA 7mer-A1 dme-miR-1006-3p X - 14232311 14232356 3'utr CG42271 FlyBase G50767.1 TGGTGTTGCATTGCGTTCCATGTGATTATGAATTTATTCTTGGAAT 6 14232328 0.983788489 4 5 41 0.9 0.954242509 0.4 0.5 0.7 6 1 0 9 X:14232311-14232356 7 3 2563 FBgn0259166 258.3166667 15.79666667 24.03666667 0.011613652 0.189913484 0.124809319 3 1 2 0.25 dme-miR-1012-3p 6mer3-8 TTGACT X 14258453 14258458 + X_14258453_14258458_+ 0.999894352 0.999388616 0.999641484 0.000357655 mud FBtr0332622|FBtr0308325|FBtr0308329|FBtr0308327|FBtr0308328 14258229|14258229|14258383|14258229|14256264 14258595|14258595|14258595|14258595|14258595 X + 14258367 14258474 stop_codon mud FlyBase G61371.1 ATGTTCAAGCGCAAGTAGGCGTGGTCGCAGTCGCAGTATTATACATATATTCCCCCATTCGTGTACATCAATCGGAACTTGAATTCTTGACTTATTATTTATGTAACC 48 14258453 0.985231866 14 47 391 0.980769231 1.707570176 0.057692308 0.083333333 0.153846154 48 1 0 51 X:14258367-14258474 6 mud FBtr0308327|FBtr0308325|FBtr0308329|FBtr0308328|FBtr0332622 14258229|14258229|14258383|14256264|14258229 14258595|14258595|14258595|14258595|14258595 TTGACT 6mer3-8 dme-miR-1012-3p X + 14258374 14258474 stop_codon mud FlyBase G46345.1 AGCGCAAGTAGGCGTGGTCGCAGTCGCAGTATTATACATATATTCCCCCATTCGTGTACATCAATCGGAACTTGAATTCTTGACTTATTATTTATGTAACC 36 14258453 0.86437693 11 32 294 0.919354839 1.45484486 0.032258065 0.472222222 0.693548387 36 4 1 57 X:14258374-14258474 6 20 2564 FBgn0002873 2508.803333 43.92333333 67.46333333 0.007971928 0.455338848 0.296457335 0 0 0 0.25 dme-miR-33-5p 7mer-A1 AATGCAA X 14258564 14258570 + X_14258564_14258570_+ 0.551181413 0.438650106 0.494915759 0.079571645 mud FBtr0332622|FBtr0308325|FBtr0308329|FBtr0308327|FBtr0308328 14258229|14258229|14258383|14258229|14256264 14258595|14258595|14258595|14258595|14258595 X + 14258486 14258576 3'utr mud FlyBase G61372.1 TTTTGTACATCAGGACTTAGAGAGTTTAGTTTAAGTATGCATATGTTGCAGTGGTACAATATCGTGGGCGAACATAATAATGCAAATAAAA 13 14258563 0.963740803 7 12 66 0.923076923 1.079181246 0.230769231 0 0 13 1 0 12 X:14258486-14258576 7 mud FBtr0308327|FBtr0308325|FBtr0308329|FBtr0308328|FBtr0332622 14258229|14258229|14258383|14256264|14258229 14258595|14258595|14258595|14258595|14258595 AATGCAA 7mer-A1 dme-miR-33-5p X + 14258531 14258582 3'utr mud FlyBase G46346.2 TTGCAGTGGTACAATATCGTGGGCGAACATAATAATGCAAATAAAATTGTCT 10 14258563 0.970490291 5 9 43 0.823529412 1.146128036 0.176470588 0.5 0.705882353 10 3 0 14 X:14258531-14258582 7 8 2565 FBgn0002873 2508.803333 43.92333333 67.46333333 0.003188771 0.182135539 0.118582934 1 1 1 0.25 dme-miR-184-3p 8mer-A1 TCCGTCCA X 1455334 1455341 - X_1455334_1455341_- 0.354481529 0.359098616 0.356790072 0.003264783 CG14785 FBtr0070231 1455213 1455406 X - 1455313 1455369 3'utr CG14785 FlyBase G64003.1 ACTTCTGGGCAGTCGTGATTCTGTCAGTTCCGTCCATTGTCCTTTGCCGTGTCCATG 71 1455342 0.842382144 6 69 661 0.978947368 1.968482949 0.136842105 0.211267606 0.410526316 71 2 0 93 X:1455313-1455369 8 CG14785 FBtr0070231 1455213 1455406 TCCGTCCA 8mer-A1 dme-miR-184-3p X - 1455322 1455365 3'utr CG14785 FlyBase G48245.1 CTGGGCAGTCGTGATTCTGTCAGTTCCGTCCATTGTCCTTTGCC 34 1455342 0.818402752 4 33 305 0.958333333 1.662757832 0.1875 0.352941176 0.541666667 34 2 0 46 X:1455322-1455365 8 51 2566 FBgn0027795 22.33333333 1.63 2.503333333 2.28358209 31.28834356 20.37283622 1 1 1 0.25 dme-bantam-3p 6mer3-8 TGATCT X 14788749 14788754 - X_14788749_14788754_- 0.832963162 0.813925451 0.823444306 0.013461687 rut FBtr0340467|FBtr0333656|FBtr0333655|FBtr0333654|FBtr0305581|FBtr0073992|FBtr0333657 14787476|14787476|14787476|14787476|14787476|14787476|14787476 14789669|14790548|14789669|14789669|14789669|14789669|14790548 X - 14788742 14788780 3'utr rut FlyBase G67465.1 CGCCCGTGCCCCACGCCAAGCGTCTTTGATCTTAAATGT 5 14788754 0.975080645 2 4 30 1 0.698970004 0.2 0 0 5 0 0 5 X:14788742-14788780 6 rut FBtr0073992|FBtr0333657|FBtr0333654|FBtr0305581|FBtr0333655|FBtr0340467|FBtr0333656 14787476|14787476|14787476|14787476|14787476|14787476|14787476 14789669|14790548|14789669|14789669|14789669|14789669|14790548 TGATCT 6mer3-8 dme-bantam-3p X - 14788739 14788767 3'utr rut FlyBase G50788.1 CGCCAAGCGTCTTTGATCTTAAATGTATG 8 14788754 0.695109832 2 8 61 1 1 0.1 0.25 0.4 8 0 0 10 X:14788739-14788767 6 6 2567 FBgn0003301 229.9033333 3.326666667 5.11 0.026097925 1.803607214 1.174168297 0 0 0 0.25 dme-miR-282-5p 6mer2-7 GAGGCT X 1480438 1480443 + X_1480438_1480443_+ 0.968315363 0.975159631 0.971737497 0.00483958 rush FBtr0339589 1480188 1481420 X + 1480421 1480466 5'utr rush FlyBase G57986.1 AAGGACGTGCAAAATTTGAGGCTTATCGAGTTCTAAGTTGGGAGAG 31 1480437 0.761585231 4 30 208 0.972222222 1.544068044 0.027777778 0.161290323 0.277777778 31 1 0 35 X:1480421-1480466 6 rush FBtr0339589 1480188 1481420 GAGGCT 6mer2-7 dme-miR-282-5p X + 1480360 1480457 5'utr rush FlyBase G43870.1 TCTTCATTGCAAGACCTTCGGACCCAATTTCGGATCTTTCATTATACCTATGCGTTAGATAAAGGACGTGCAAAATTTGAGGCTTATCGAGTTCTAAG 21 1480437 0.979291784 8 20 140 1 1.505149978 0.125 0.428571429 0.625 21 0 0 32 X:1480360-1480457 6 22 2568 FBgn0025381 3553.903333 199.46 304.35 0.006190377 0.110297804 0.072285198 1 1 1 0.25 dme-miR-305-5p 7mer-A1 GTACAAA X 1481381 1481387 + X_1481381_1481387_+ 0.761647752 0.77051956 0.766083656 0.00627331 rush FBtr0070259|FBtr0339589 1480188|1480188 1481420|1481420 X + 1481262 1481420 3'utr rush FlyBase G57989.1 GTTCCCGTTTTTGGCGGATAAGAACCACTAAAATCGTATGTTTGGCGAGAGGATAAACTATATGGATATGTATACAACATAAGCAATTTGCAATTGCGATCATTAACTGTTTTCTATTTGTACAAAGCCCAAAAAACAATAAATTAATACTGTAAATTG 95 1481379 0.986358411 23 87 743 0.930434783 1.427323786 0.086956522 0.168421053 0.313043478 95 5 3 107 X:1481262-1481420 7 rush FBtr0070259|FBtr0339589 1480188|1480188 1481420|1481420 GTACAAA 7mer-A1 dme-miR-305-5p X + 1481018 1481399 3'utr rush FlyBase G43871.1 AACGGAAGCGATGCGAGCAGGAGGAGATTAAGGAGCTGCGCAAGATGACGGCATTCAAGGCTCGTCCGAATCCATTTAAATAGTGCTCGACGGAACCAATCGACTACCAAACGTTTGATAGCCCTGTCCAAATTTAAATGAAGTGAAGTCGATGCTACACATAATCGTGTTTACCGATGCATAGTTTTACCAGATTAACACAATTTTTGTCTCTTAACATTAACATTACTTTTACGCATATATCGTTCCCGTTTTTGGCGGATAAGAACCACTAAAATCGTATGTTTGGCGAGAGGATAAACTATATGGATATGTATACAACATAAGCAATTTGCAATTGCGATCATTAACTGTTTTCTATTTGTACAAAGCCCAAAAAACA 146 1481378 0.991576417 53 137 1106 0.948356808 2.305351369 0.079812207 0.363013699 0.563380282 146 11 0 202 X:1481018-1481399 7 31.5 2569 FBgn0025381 3553.903333 199.46 304.35 0.008863494 0.157926401 0.103499261 2 3 2.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA X 14827158 14827164 - X_14827158_14827164_- 0.647927831 0.587506704 0.617717268 0.04272417 CG14408 FBtr0073990|FBtr0339446|FBtr0305580|FBtr0340466 14827056|14827056|14827056|14826865 14827787|14827787|14827787|14827787 X - 14827148 14827183 3'utr CG14408 FlyBase G67476.1 AAAAGCAAATAACTAAATGCTAGTCAACAAAAACGA 41 14827166 0.734298194 3 40 160 0.978723404 1.662757832 0 0.12195122 0.234042553 41 1 0 46 X:14827148-14827183 7 CG14408 FBtr0340466|FBtr0305580|FBtr0339446|FBtr0073990 14826865|14827056|14827056|14827056 14827787|14827787|14827787|14827787 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X - 14827148 14827184 3'utr CG14408 FlyBase G50797.1 AAAAAGCAAATAACTAAATGCTAGTCAACAAAAACGA 29 14827166 0.747366754 2 27 114 0.952380952 1.602059991 0.047619048 0.310344828 0.523809524 29 2 0 40 X:14827148-14827184 7 35 2570 FBgn0030581 268.9266667 10.35333333 15.88666667 0.130147004 3.380553767 2.203105329 2 2 2 0.25 dme-miR-31a-5p 7mer-m8 TCTTGCC X 14851077 14851083 - X_14851077_14851083_- 0.660739393 0.658963841 0.659851617 0.001255539 CG9521 FBtr0073985 14851003 14851256 X - 14851047 14851176 3'utr CG9521 FlyBase G67488.1 ATCACACCTTAAATGCAATGGCCAGTGTAAAATGGGGCTTTAGTTTTAGTTAAGGCCTTCGAAAACTTTTTGTTATTATGTGTAGTAATTCTTTCTTGCCTGAACTGATTCTAGTTTAAGATTTAGTTAT 85 14851081 0.898483573 19 72 801 0.848484848 1.62324929 0.090909091 0.141176471 0.262626263 85 14 1 84 X:14851047-14851176 7 CG9521 FBtr0073985 14851003 14851256 TCTTGCC 7mer-m8 dme-miR-31a-5p X - 14851039 14851103 3'utr CG9521 FlyBase G50803.1 TATTATGTGTAGTAATTCTTTCTTGCCTGAACTGATTCTAGTTTAAGATTTAGTTATATAAGCAT 45 14851081 0.613340139 11 43 437 0.948275862 1.740362689 0.103448276 0.244444444 0.413793103 45 3 0 55 X:14851039-14851103 7 47 2571 FBgn0030588 765.0066667 37.97666667 54.6 0.061437373 1.237602036 0.860805861 -2 -2 -2 0.25 dme-miR-308-3p 7mer-m1 TGTGATT X 14934583 14934589 - X_14934583_14934589_- 0.519176884 0.519668439 0.519422662 0.000347543 pdgy FBtr0303294|FBtr0343521|FBtr0073972|FBtr0308838 14933668|14934038|14934038|14934038 14934629|14934629|14934629|14934629 X - 14934576 14934612 3'utr pdgy FlyBase G67498.1 CTTCGTAGGCTAAGAAATATTTTTGTGATTTTTTTTT 21 14934591 0.701898922 5 21 265 1 1.397940009 0.12 0.142857143 0.28 21 0 0 25 X:14934576-14934612 7 pdgy FBtr0303294|FBtr0343521|FBtr0073972|FBtr0308838 14933668|14934038|14934038|14934038 14934629|14934629|14934629|14934629 TGTGATT 7mer-m1 dme-miR-308-3p X - 14934578 14934613 3'utr pdgy FlyBase G50810.1 TCTTCGTAGGCTAAGAAATATTTTTGTGATTTTTTT 10 14934591 0.677574682 6 10 121 1 1.113943352 0 0.3 0.461538462 10 0 0 13 X:14934578-14934613 7 15 2572 FBgn0027601 126.1633333 5.696666667 8.713333333 0.118893498 2.633118783 1.721499617 2 2 2 0.25 dme-bantam-3p 6mer3-8 TGATCT X 15032981 15032986 + X_15032981_15032986_+ 0.999480405 0.999128216 0.99930431 0.000249043 be FBtr0073956 15032682 15042060 X + 15032937 15032995 3'utr be FlyBase G61415.1 GAAATACCTATTGAAAAAAACATGAAATACGCTAAACGAAACTTTGATCTGTATATAAA 20 15032981 0.972342583 7 20 118 1 1.342422681 0.090909091 0.05 0.136363636 20 0 0 22 X:15032937-15032995 6 be FBtr0073956 15032682 15042060 TGATCT 6mer3-8 dme-bantam-3p X + 15032949 15032995 3'utr be FlyBase G46376.1 GAAAAAAACATGAAATACGCTAAACGAAACTTTGATCTGTATATAAA 16 15032989 0.878212254 5 16 90 1 1.414973348 0 0.375 0.615384615 16 0 0 26 X:15032949-15032995 6 13.5 2573 FBgn0052594 1740.783333 62.23 95.48 0.007755129 0.216937169 0.141390867 0 -8 -4 0.25 dme-miR-263a-5p 6mer2-7 TGCCAT X 15033706 15033711 + X_15033706_15033711_+ 0.962512916 0.944425956 0.953469436 0.01278937 be FBtr0073956 15032682 15042060 X + 15033684 15033726 5'utr be FlyBase G61417.1 AGCCGTCGACGACGGCCAATTATGCCATCCCCGTTTGGAGGTC 19 15033705 0.730773617 4 19 107 1 1.322219295 0.19047619 0.052631579 0.142857143 19 0 0 21 X:15033684-15033726 6 be FBtr0073956 15032682 15042060 TGCCAT 6mer2-7 dme-miR-263a-5p X + 15033691 15033727 5'utr be FlyBase G46378.1 GACGACGGCCAATTATGCCATCCCCGTTTGGAGGTCC 9 15033706 0.932382037 3 9 49 1 1.079181246 0.25 0.333333333 0.5 9 0 0 12 X:15033691-15033727 6 14 2574 FBgn0052594 1740.783333 62.23 95.48 0.008042356 0.224971879 0.146627566 1 0 0.5 0.25 dme-miR-283-5p 7mer-m8 TGATATT X 15041738 15041744 + X_15041738_15041744_+ 0.571184627 0.587768242 0.579476434 0.011726376 be FBtr0073957|FBtr0073956 15034089|15032682 15042060|15042060 X + 15041627 15041845 3'utr be FlyBase G61420.1 ATATATATATACCTATGAATCTGCCACAATCTGTCACACCTGCCAGCCACAAAAAAGAGTATAAGATGAGTGAATGATTAGAGAGAAACAAAAAATACCGAAAACACAATGTGATATTCTCTGGATATGCGATGAACTGAGGAGACCTACGCATATACCTAATTAGCTAGGGAGAAGCGAACTAGGAGATATAAACCATAAGCTAGATTAAGTGAATTA 581 15041743 0.948861065 38 533 2628 0.91954023 2.028028724 0.202586207 0.166953528 0.304597701 581 51 5 640 X:15041627-15041845 7 be FBtr0073957|FBtr0073956 15034089|15032682 15042060|15042060 TGATATT 7mer-m8 dme-miR-283-5p X + 15041628 15041842 3'utr be FlyBase G46381.1 TATATATATACCTATGAATCTGCCACAATCTGTCACACCTGCCAGCCACAAAAAAGAGTATAAGATGAGTGAATGATTAGAGAGAAACAAAAAATACCGAAAACACAATGTGATATTCTCTGGATATGCGATGAACTGAGGAGACCTACGCATATACCTAATTAGCTAGGGAGAAGCGAACTAGGAGATATAAACCATAAGCTAGATTAAGTGAA 367 15041743 0.955283087 36 335 1540 0.91005291 2.11058971 0.218694885 0.386920981 0.603174603 367 48 3 516 X:15041628-15041842 7 157.5 2575 FBgn0052594 1740.783333 62.23 95.48 0.09047651 2.530933633 1.649560117 -5 -5 -5 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 15051306 15051311 + X_15051306_15051311_+ 0.999799303 0.999222573 0.999510938 0.000407788 CG5541 FBtr0073959|FBtr0073958 15051108|15051108 15051842|15051842 X + 15051275 15051338 3'utr CG5541 FlyBase G61430.1 ACAGAACCACCAATGCGTGACCTTTCGCTGTACCAAAACCATAGCCTACAGTTAGTCGTAATAT 21 15051316 0.962332074 6 20 118 0.956521739 1.342422681 0.130434783 0.095238095 0.173913043 21 1 0 22 X:15051275-15051338 6 CG5541 FBtr0073959|FBtr0073958 15051108|15051108 15051842|15051842 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 15051274 15051339 3'utr CG5541 FlyBase G46391.1 TACAGAACCACCAATGCGTGACCTTTCGCTGTACCAAAACCATAGCCTACAGTTAGTCGTAATATA 19 15051304 0.964291202 8 19 99 1 1.397940009 0.2 0.263157895 0.44 19 0 0 25 X:15051274-15051339 6 15.5 2576 FBgn0030603 416.6633333 20.09 30.71333333 0.037200298 0.771528123 0.504666811 -10 2 -4 0.25 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT X 15051502 15051508 + X_15051502_15051508_+ 0.619053394 0.620104787 0.619579091 0.000743452 CG5541 FBtr0073959|FBtr0073958 15051108|15051108 15051842|15051842 X + 15051485 15051531 3'utr CG5541 FlyBase G61432.1 AATTTAAAGCCAAAATGTGGTGCTCTTAAATGTATATGCTACATATG 42 15051501 0.845618218 7 41 330 0.960784314 1.69019608 0.176470588 0.19047619 0.333333333 42 2 0 49 X:15051485-15051531 7 CG5541 FBtr0073959|FBtr0073958 15051108|15051108 15051842|15051842 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" X + 15051485 15051522 3'utr CG5541 FlyBase G46393.1 AATTTAAAGCCAAAATGTGGTGCTCTTAAATGTATATG 11 15051501 0.78149501 4 10 73 0.941176471 1.204119983 0.235294118 0.454545455 0.647058824 11 1 0 16 X:15051485-15051522 7 26.5 2577 FBgn0030603 416.6633333 20.09 30.71333333 0.063600509 1.319064211 0.862817452 1 1 1 0.25 dme-miR-34-5p 8mer-A1 CACTGCCA X 15064479 15064486 + X_15064479_15064486_+ 0.67284845 0.676330835 0.674589642 0.002462429 CG5548 FBtr0073960|FBtr0340425|FBtr0340424 15064402|15064402|15064402 15064548|15064548|15064926 X + 15064455 15064524 3'utr CG5548 FlyBase G61434.1 AGGCGACGCTCCTGGCCGCGGATTCACTGCCACTGCCCCATGTTGCAAGCTAGTTTCCAGCGGAAATGTC 23 15064477 0.954425967 5 23 104 1 1.491361694 0.193548387 0.217391304 0.419354839 23 0 0 31 X:15064455-15064524 8 CG5548 FBtr0340424 15064402 15064926 CACTGCCA 8mer-A1 dme-miR-34-5p X + 15064462 15064502 3'utr CG5548 FlyBase G46394.1 GCTCCTGGCCGCGGATTCACTGCCACTGCCCCATGTTGCAA 8 15064477 0.960478759 3 7 34 0.909090909 1 0.181818182 0.25 0.454545455 8 1 0 10 X:15064462-15064502 8 14 2578 FBgn0030605 769.6633333 180.22 277.04 0.018189771 0.077682832 0.050534219 2 2 2 0.25 dme-miR-79-3p 8mer-A1 TAGCTTTA X 15068873 15068880 + X_15068873_15068880_+ 0.411462845 0.518451789 0.464957317 0.075652647 dob FBtr0073961 15068864 15069091 X + 15068844 15068903 stop_codon dob FlyBase G61437.1 GGGGACATCCGGTGTTCATTAGGCGCCATTAGCTTTATCAGCGATCGTCCCATCGATCGG 37 15068872 0.984102479 2 34 270 0.931818182 1.612783857 0.25 0.162162162 0.295454545 37 3 0 41 X:15068844-15068903 8 dob FBtr0073961 15068864 15069091 TAGCTTTA 8mer-A1 dme-miR-79-3p X + 15068861 15068892 stop_codon dob FlyBase G46397.1 ATTAGGCGCCATTAGCTTTATCAGCGATCGTC 14 15068872 0.85355754 3 14 97 1 1.342422681 0.181818182 0.5 0.681818182 14 0 0 22 X:15068861-15068892 8 25 2579 FBgn0030607 31.33333333 1.986666667 2.963333333 0.79787234 12.58389262 8.436445444 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 15069031 15069036 + X_15069031_15069036_+ 0.812684156 0.834324539 0.823504348 0.015302003 dob FBtr0073961|FBtr0073961|FBtr0073961 15068864|15068864|15068864 15069091|15069091|15069091 X + 15069011 15069045 3'utr dob FlyBase G61438.1 TTTTTTTTATGTACTGACTGCTGTGAACAAAATAA 28 15069030 0.699729444 5 27 166 0.966666667 1.462397998 0.033333333 0.071428571 0.133333333 28 1 0 29 X:15069011-15069045 6 dob FBtr0073961|FBtr0073961|FBtr0073961 15068864|15068864|15068864 15069091|15069091|15069091 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X + 15069019 15069048 3'utr dob FlyBase G46398.1 ATGTACTGACTGCTGTGAACAAAATAAATT 23 15069030 0.691427492 4 22 114 0.972972973 1.556302501 0 0.47826087 0.675675676 23 1 0 36 X:15069019-15069048 6 25.5 2580 FBgn0030607 31.33333333 1.986666667 2.963333333 0.813829787 12.83557047 8.605174353 1 1 1 0.25 dme-miR-980-3p 6mer2-7 GCAGCT X 15082310 15082315 + X_15082310_15082315_+ 0.993258047 0.974166296 0.983712171 0.013499871 CG33177 FBtr0073962 15082192 15082369 X + 15082267 15082326 3'utr CG33177 FlyBase G61443.1 AGGTTTTGGGTGCTCATTTTCAGTGAAACGTATGGTTAATTTAGCAGCTTTTGTCCTATA 11 15082316 0.990071182 7 11 109 1 1.079181246 0.166666667 0.090909091 0.166666667 11 0 0 12 X:15082267-15082326 6 CG33177 FBtr0073962 15082192 15082369 GCAGCT 6mer2-7 dme-miR-980-3p X + 15082245 15082334 3'utr CG33177 FlyBase G46401.1 AGCACCAGTGATGTCAAGGTACAGGTTTTGGGTGCTCATTTTCAGTGAAACGTATGGTTAATTTAGCAGCTTTTGTCCTATAAGTAGGAA 7 15082317 0.989282418 7 7 65 1 1.146128036 0.214285714 0.571428571 0.785714286 7 0 0 14 X:15082245-15082334 6 6.5 2581 FBgn0053177 17.33333333 2.496666667 3.806666667 0.375 2.603471295 1.707530648 -6 -7 -6.5 0.25 dme-miR-2a-2-5p 7mer-m1 GATGAGG X 15088282 15088288 + X_15088282_15088288_+ 0.551078977 0.595712655 0.573395816 0.031560792 CG5599 FBtr0073964 15088247 15088629 X + 15088245 15088314 stop_codon CG5599 FlyBase G61446.1 CTAGAGAGCCTATTACTCGAAAACGCTTACTTTTACGGATGAGGCTCTTTCCCATGCATTTATCTAGACA 251 15088284 0.929656086 13 245 2070 0.975945017 2.152288344 0.024054983 0.147410359 0.264604811 251 6 1 284 X:15088245-15088314 7 CG5599 FBtr0073964 15088247 15088629 GATGAGG 7mer-m1 dme-miR-2a-2-5p X + 15088259 15088316 3'utr CG5599 FlyBase G46405.1 ACTCGAAAACGCTTACTTTTACGGATGAGGCTCTTTCCCATGCATTTATCTAGACATA 163 15088284 0.911829466 11 159 1299 0.97260274 2.328379603 0.146118721 0.282208589 0.465753425 163 6 0 213 X:15088259-15088316 7 199.5 2582 FBgn0030612 84.33666667 5.47 8.336666667 2.365519149 36.47166362 23.93042783 -2 -2 -2 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA X 15088496 15088503 + X_15088496_15088503_+ 0.620416751 0.614099891 0.617258321 0.004466723 CG5599 FBtr0073964 15088247 15088629 X + 15088477 15088509 3'utr CG5599 FlyBase G61448.1 ACTTTTATCGTTGTTAACCTGCATTTATATATC 11 15088490 0.665580778 4 11 110 1 1.041392685 0.090909091 0 0 11 0 0 11 X:15088477-15088509 8 CG5599 FBtr0073964 15088247 15088629 TGCATTTA 8mer-A1 dme-miR-277-3p X + 15088485 15088508 3'utr CG5599 FlyBase G46407.1 CGTTGTTAACCTGCATTTATATAT 8 15088489 0.667608041 4 5 79 0.727272727 0.602059991 0 0.375 0.545454545 8 2 1 8 X:15088485-15088508 8 9.5 2583 FBgn0030612 84.33666667 5.47 8.336666667 0.112643769 1.736745887 1.139544182 6 7 6.5 0.25 dme-miR-317-3p 8mer-A1 TGTGTTCA X 1515756 1515763 + X_1515756_1515763_+ 0.451907941 0.393180398 0.422544169 0.041526613 inc FBtr0339591|FBtr0070260|FBtr0339590 1515389|1515389|1515389 1517615|1517615|1517137 X + 1515734 1515805 3'utr inc FlyBase G57995.1 ACGAAGTGTGTGCGGGCGTGCATGTGTTCAACTTGTAGTAAACCAGATAGACCCGACTGTACGAGCAACAAG 45 1515756 0.944432882 8 43 296 0.965517241 1.748188027 0.172413793 0.266666667 0.431034483 45 2 0 56 X:1515734-1515805 8 inc FBtr0070260|FBtr0339590|FBtr0339591 1515389|1515389|1515389 1517615|1517137|1517615 TGTGTTCA 8mer-A1 dme-miR-317-3p X + 1515734 1515794 3'utr inc FlyBase G43877.1 ACGAAGTGTGTGCGGGCGTGCATGTGTTCAACTTGTAGTAAACCAGATAGACCCGACTGTA 21 1515756 0.980218697 4 21 146 1 1.491361694 0.322580645 0.380952381 0.580645161 21 0 0 31 X:1515734-1515794 8 30 2584 FBgn0025394 956.7333333 41.24 63.02 0.0313567 0.727449079 0.476039353 0 0 0 0.25 dme-miR-1003-3p 6mer3-8 ATGTGA X 1516418 1516423 + X_1516418_1516423_+ 0.99810952 0.989375821 0.993742671 0.006175658 inc FBtr0339591|FBtr0070260|FBtr0339590 1515389|1515389|1515389 1517615|1517615|1517137 X + 1516319 1516438 3'utr inc FlyBase G57997.1 GTTTTGTGTAGGCCCGGTTTTACTACCTTGAGCTTTATTTTAGAAAACGAGCAAGGCGAAGATCAACTTTAGGAAATCAATTGAATCACGACTGAATTTATGTGAACTTGCACTCAAAGA 22 1516416 0.983555366 11 20 159 0.884615385 1.06069784 0.115384615 0.090909091 0.230769231 22 2 1 23 X:1516319-1516438 6 inc FBtr0070260|FBtr0339590|FBtr0339591 1515389|1515389|1515389 1517615|1517137|1517615 ATGTGA 6mer3-8 dme-miR-1003-3p X + 1516388 1516476 3'utr inc FlyBase G43879.1 TAGGAAATCAATTGAATCACGACTGAATTTATGTGAACTTGCACTCAAAGAAAATACATACATGCGAATACATTATAGTGAGGATATAC 21 1516400 0.974942179 12 21 129 1 1.51851394 0.121212121 0.428571429 0.636363636 21 0 0 33 X:1516388-1516476 6 11.5 2585 FBgn0025394 956.7333333 41.24 63.02 0.012020068 0.27885548 0.182481752 2 18 10 0.25 dme-miR-1012-3p 6mer3-8 TTGACT X 1516684 1516689 + X_1516684_1516689_+ 0.712349124 0.978201975 0.845275549 0.187986388 inc FBtr0339591|FBtr0070260|FBtr0339590 1515389|1515389|1515389 1517615|1517615|1517137 X + 1516624 1516728 3'utr inc FlyBase G57999.1 AGCGAAAATTGAAGATGATCCAGAACGTCGCCACCTACTCGTACCCATTTTGTATCCATTTTGACTTATTTTACGAGCACAGCTGGTGCAGATTATATAGAGTAT 14 1516683 0.983791318 9 12 95 0.9375 0.875061263 0.125 0.071428571 0.1875 14 0 1 15 X:1516624-1516728 6 inc FBtr0070260|FBtr0339590|FBtr0339591 1515389|1515389|1515389 1517615|1517137|1517615 TTGACT 6mer3-8 dme-miR-1012-3p X + 1516671 1516765 3'utr inc FlyBase G43881.1 TTTTGTATCCATTTTGACTTATTTTACGAGCACAGCTGGTGCAGATTATATAGAGTATAACTTATGCTTACGAGGATTATTTCGACGAAGAACCT 8 1516684 0.986567326 5 7 66 1 1 0.2 0.25 0.4 8 0 0 10 X:1516671-1516765 6 3.5 2586 FBgn0025394 956.7333333 41.24 63.02 0.003658282 0.084869059 0.055537924 1 0 0.5 0.25 dme-miR-283-5p 6mer3-8 TGATAT X 15317815 15317820 + X_15317815_15317820_+ 0.47105094 0.500548642 0.485799791 0.020858024 gce FBtr0310308|FBtr0303199|FBtr0303198|FBtr0331765 15317764|15317764|15317764|15317764 15319074|15319074|15319074|15319074 X + 15317750 15317841 stop_codon gce FlyBase G61467.1 GGACGACCAGGACTAGAGTGATGGAGAGCGCCCGATCGGGTCTCGACTGAAGGGTTTCATCGATGTGATATGTAACTACTGTCCTGGCAGTC 45 15317791 0.961321726 14 38 257 0.854166667 1.311753861 0.208333333 0.066666667 0.125 45 6 1 41 X:15317750-15317841 6 gce FBtr0303198|FBtr0331765|FBtr0310308|FBtr0303199 15317764|15317764|15317764|15317764 15319074|15319074|15319074|15319074 TGATAT 6mer3-8 dme-miR-283-5p X + 15317753 15317840 stop_codon gce FlyBase G46420.1 CGACCAGGACTAGAGTGATGGAGAGCGCCCGATCGGGTCTCGACTGAAGGGTTTCATCGATGTGATATGTAACTACTGTCCTGGCAGT 27 15317792 0.975468614 10 26 163 0.96969697 1.505149978 0.303030303 0.222222222 0.363636364 27 1 0 32 X:15317753-15317840 6 15 2587 FBgn0261703 2542.05 55.46 85.10666667 0.005900749 0.2704652 0.176249413 24 23 23.5 0.25 dme-miR-970-3p 7mer-A1 CTTATGA X 15327101 15327107 + X_15327101_15327107_+ 0.742120153 0.456219098 0.599169626 0.202162607 Top1 FBtr0100294|FBtr0340434 15325917|15325917 15328029|15328029 X + 15327063 15327124 3'utr Top1 FlyBase G61499.1 TGGATGGATCTCGATGTGGTTTCGCTTTGATTTCGTACCTTATGATCATTTTAGTTAACATT 15 15327105 0.881818272 6 15 165 1 1.230448921 0 0.133333333 0.235294118 15 0 0 17 X:15327063-15327124 7 Top1 FBtr0100294|FBtr0340434 15325917|15325917 15328029|15328029 CTTATGA 7mer-A1 dme-miR-970-3p X + 15327051 15327124 3'utr Top1 FlyBase G46446.1 ACAAAGCCACATTGGATGGATCTCGATGTGGTTTCGCTTTGATTTCGTACCTTATGATCATTTTAGTTAACATT 14 15327105 0.964706856 6 14 143 1 1.397940009 0 0.357142857 0.64 14 0 0 25 X:15327051-15327124 7 10.5 2588 FBgn0004924 1711.443333 50.77666667 78.29333333 0.006135172 0.206787895 0.134111035 -4 -4 -4 0.25 dme-miR-1003-3p 6mer3-8 ATGTGA X 15327701 15327706 + X_15327701_15327706_+ 0.708634286 0.555185252 0.631909769 0.108504828 Top1 FBtr0100294|FBtr0340434 15325917|15325917 15328029|15328029 X + 15327675 15327756 3'utr Top1 FlyBase G61503.1 ACATATTATAATTAGTGATTGATATAATGTGAACGCAAACATCTGTGTGCGTTTGTCGTGGATTCGCATACGGAAGCGGGAG 11 15327696 0.978648405 7 11 80 1 1.079181246 0.25 0.090909091 0.166666667 11 0 0 12 X:15327675-15327756 6 Top1 FBtr0100294|FBtr0340434 15325917|15325917 15328029|15328029 ATGTGA 6mer3-8 dme-miR-1003-3p X + 15327666 15327712 3'utr Top1 FlyBase G46448.1 CGCCCAAACACATATTATAATTAGTGATTGATATAATGTGAACGCAA 7 15327694 0.979946123 3 7 51 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 X:15327666-15327712 6 4.5 2589 FBgn0004924 1711.443333 50.77666667 78.29333333 0.00262936 0.088623383 0.057476158 5 7 6 0.25 dme-bantam-3p 7mer-A1 GATCTCA X 15381124 15381130 - X_15381124_15381130_- 0.623406296 0.805256372 0.714331334 0.128587439 CG9164 FBtr0074014|FBtr0074012|FBtr0343351 15380637|15380369|15380637 15381343|15381343|15381343 X - 15381107 15381147 3'utr CG9164 FlyBase G67543.1 CGACTCGTAGGACCATAGATCTCACTGGGGGTCAGCAAACA 14 15381132 0.895301659 2 13 56 0.941176471 1.204119983 0.235294118 0.142857143 0.294117647 14 1 0 16 X:15381107-15381147 7 CG9164 FBtr0074012|FBtr0343351|FBtr0074014 15380369|15380637|15380637 15381343|15381343|15381343 GATCTCA 7mer-A1 dme-bantam-3p X - 15381107 15381153 3'utr CG9164 FlyBase G50838.1 TCATCACGACTCGTAGGACCATAGATCTCACTGGGGGTCAGCAAACA 18 15381132 0.818915307 2 18 82 1 1.431363764 0.37037037 0.444444444 0.62962963 18 0 0 27 X:15381107-15381153 7 16 2590 FBgn0030634 21.68 1.186666667 1.78 0.73800738 13.48314607 8.988764045 2 2 2 0.25 dme-miR-986-5p 6mer3-8 ATTCGA X 15464923 15464928 + X_15464923_15464928_+ 0.85829421 0.568754008 0.713524109 0.204735839 CG6294 FBtr0308830 15464407 15465027 X + 15464888 15464945 5'utr CG6294 FlyBase G61549.1 TTTATTTATTGATAAGCCTTATCGCTGTTACTATGATTCGAAAATGCGTGATAGTTAA 11 15464932 0.9840066 5 10 80 0.928571429 1.113943352 0.071428571 0.272727273 0.428571429 11 1 0 13 X:15464888-15464945 6 CG6294 FBtr0308830 15464407 15465027 ATTCGA 6mer3-8 dme-miR-986-5p X + 15464905 15464945 5'utr CG6294 FlyBase G46481.1 CTTATCGCTGTTACTATGATTCGAAAATGCGTGATAGTTAA 5 15464932 0.979812771 3 5 35 1 0.903089987 0.125 0.6 0.75 5 0 0 8 X:15464905-15464945 6 7.5 2591 FBgn0030640 37.48 1.823333333 2.763333333 0.200106724 4.113345521 2.71411339 -9 -9 -9 0.25 dme-miR-307a-3p 6mer2-7 GTTGTG X 15579482 15579487 + X_15579482_15579487_+ 0.890933048 0.861237652 0.87608535 0.020997748 CG7872 FBtr0074046 15579434 15579857 X + 15579424 15579549 stop_codon CG7872 FlyBase G61572.1 TTTGAGGATTAGCCGCTGCTCTGCGATGTTCAAGTTTCATTGTTCCATCTAAAAGTCTGTTGTGTGCGTGTTGTAAAACCGATCCCAAATTCCTCGCCCTCGGCATCCCCATACCGTCTAAATTTT 75 15579483 0.987354063 14 69 602 0.929411765 1.596597096 0.294117647 0.133333333 0.235294118 75 5 1 79 X:15579424-15579549 6 CG7872 FBtr0074046 15579434 15579857 GTTGTG 6mer2-7 dme-miR-307a-3p X + 15579461 15579550 3'utr CG7872 FlyBase G46500.1 CATTGTTCCATCTAAAAGTCTGTTGTGTGCGTGTTGTAAAACCGATCCCAAATTCCTCGCCCTCGGCATCCCCATACCGTCTAAATTTTG 50 15579483 0.919210266 12 44 381 0.907894737 1.236789099 0.315789474 0.34 0.565789474 50 4 3 69 X:15579461-15579550 6 38.5 2592 FBgn0030658 603.0033333 44.82333333 68.86333333 0.063847077 0.858927642 0.559078368 -1 -1 -1 0.25 dme-bantam-3p 6mer3-8 TGATCT X 15585131 15585136 + X_15585131_15585136_+ 0.929950194 0.847990201 0.888970197 0.057954472 CG8097 FBtr0340344 15584989 15585249 X + 15585032 15585218 3'utr CG8097 FlyBase G61584.1 AAAAAACACAAAAACAAGAGGCTAATGCGAAACCATAGCAAAACTAAATGCTGGCTCAACAGTGGGCGGTAATAATATATGTAATAATATAATGACATGTGATCTTAAAAGGGCCATACAATATTGATATAACATAGTTACACCTCTCATTTTATCGATAATAATCAAAATATAGCAGTATCTACTT 122 15585131 0.965562643 23 120 637 0.986206897 2.155336037 0.131034483 0.147540984 0.282758621 122 2 0 143 X:15585032-15585218 6 CG8097 FBtr0340344 15584989 15585249 TGATCT 6mer3-8 dme-bantam-3p X + 15585026 15585179 3'utr CG8097 FlyBase G46509.1 AAAAAAAAAAAACACAAAAACAAGAGGCTAATGCGAAACCATAGCAAAACTAAATGCTGGCTCAACAGTGGGCGGTAATAATATATGTAATAATATAATGACATGTGATCTTAAAAGGGCCATACAATATTGATATAACATAGTTACACCTCTC 99 15585131 0.961362524 14 94 473 0.97260274 1.851258349 0.164383562 0.363636364 0.568493151 99 3 1 142 X:15585026-15585179 6 67 2593 FBgn0030660 130.6666667 8.276666667 12.6 0.512755102 8.095046315 5.317460317 0 0 0 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 15585646 15585651 - X_15585646_15585651_- 0.997804331 0.758004362 0.877904347 0.169564135 CG9220 FBtr0074064|FBtr0340347 15585287|15585287 15585993|15585993 X - 15585640 15585679 3'utr CG9220 FlyBase G67613.1 GGAACATTTATGGCGATTAAATGTAGTTACCAAAAATCAT 6 15585653 0.963419072 3 6 33 1 0.954242509 0.555555556 0.333333333 0.555555556 6 0 0 9 X:15585640-15585679 6 CG9220 FBtr0074064|FBtr0340347 15585287|15585287 15585993|15585993 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X - 15585598 15585716 3'utr CG9220 FlyBase G50883.1 ATGCTAAAAACAAATGAAATGTAAATAAGAGTAAAACGGAACATTTATGGCGATTAAATGTAGTTACCAAAAATCATTATTATGTATCTAATGATACATTGTTTTCTAACCAAAGTCGC 11 15585652 0.98168989 6 10 74 1 1.146128036 0.285714286 0.272727273 0.428571429 11 0 0 14 X:15585598-15585716 6 4 2594 FBgn0030662 132.6 4.106666667 6.293333333 0.030165913 0.974025974 0.63559322 2 1 1.5 0.25 dme-bantam-3p 7mer-m8 TGATCTC X 15702113 15702119 - X_15702113_15702119_- 0.496237082 0.654856076 0.575546579 0.112160571 Pis FBtr0074059 15701449 15703028 X - 15702053 15702137 3'utr Pis FlyBase G67632.1 TTGCCGTGCTCAAGGCCCTGATCTCGGTGATGCACGCCTACGTGGCGGGCATCGATCTGGCGGCCGTGGATGTACGCGAGCGGCA 46 15702110 0.970930719 7 42 238 0.918367347 1.051152522 0.244897959 0.043478261 0.102040816 46 1 3 45 X:15702053-15702137 7 Pis FBtr0074059 15701449 15703028 TGATCTC 7mer-m8 dme-bantam-3p X - 15702054 15702137 3'utr Pis FlyBase G50898.1 TTGCCGTGCTCAAGGCCCTGATCTCGGTGATGCACGCCTACGTGGCGGGCATCGATCTGGCGGCCGTGGATGTACGCGAGCGGC 20 15702110 0.967150286 6 18 98 0.9 1.431363764 0.166666667 0.4 0.6 20 3 0 27 X:15702054-15702137 7 29 2595 FBgn0030670 380.6666667 33.08333333 50.32333333 0.076182137 0.876574307 0.576273432 -9 -9 -9 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 15702290 15702295 - X_15702290_15702295_- 0.877850836 0.586325931 0.732088384 0.206139234 Pis FBtr0074059 15701449 15703028 X - 15702264 15702367 5'utr Pis FlyBase G67633.1 AATGCGATTGTATTACCAGAAGGACATACTCACATTCATGTGCTGCGTCAATGAGCTGTTTTACGTGTGCTTGTACCTCTTGCATTTCACCTACGGCCCGCTGA 43 15702288 0.837620263 10 38 362 0.905660377 1.204119983 0.301886792 0.186046512 0.339622642 43 3 2 48 X:15702264-15702367 6 Pis FBtr0074059 15701449 15703028 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X - 15702265 15702327 5'utr Pis FlyBase G50899.1 TGCTGCGTCAATGAGCTGTTTTACGTGTGCTTGTACCTCTTGCATTTCACCTACGGCCCGCTG 14 15702288 0.985631989 5 14 116 1 1.230448921 0.235294118 0.214285714 0.352941176 14 0 0 17 X:15702265-15702327 6 22 2596 FBgn0030670 380.6666667 33.08333333 50.32333333 0.057793345 0.664987406 0.437172948 -7 -7 -7 0.25 dme-miR-34-5p 6mer2-7 ACTGCC X 15706216 15706221 - X_15706216_15706221_- 0.897206109 0.857719741 0.877462925 0.027921101 CG9281 FBtr0074056|FBtr0074057 15705804|15705804 15706932|15706932 X - 15706195 15706257 3'utr CG9281 FlyBase G67636.1 AGTAGTCGCAGCAAATTGTGTGAGAAACGATGTTAAACTGCCCTCCCAAATCGGAACCGTGAT 133 15706219 0.872496801 9 126 624 0.987421384 1.894869657 0.616352201 0.172932331 0.308176101 133 1 1 157 X:15706195-15706257 6 CG9281 FBtr0074057|FBtr0074056 15705804|15705804 15706932|15706932 ACTGCC 6mer2-7 dme-miR-34-5p X - 15706149 15706257 3'utr CG9281 FlyBase G50902.1 AGTAGTCGCAGCAAATTGTGTGAGAAACGATGTTAAACTGCCCTCCCAAATCGGAACCGTGATTTAGTTGCTCGCGGATTCGAACAAGACAATTAAATATTCTTCGATT 84 15706219 0.965607003 7 79 423 0.96 1.602059991 0.664 0.357142857 0.568 84 3 2 120 X:15706149-15706257 6 96.5 2597 FBgn0030672 2569.26 100.7833333 155.7866667 0.037559453 0.957499587 0.619436837 -2 -2 -2 0.25 dme-miR-318-3p 6mer2-7 CCAGTG X 15706914 15706919 - X_15706914_15706919_- 0.999029973 0.737658619 0.868344296 0.184817489 CG9281 FBtr0074056|FBtr0074057|FBtr0340308 15705804|15705804|15706444 15706932|15706932|15706932 X - 15706881 15706929 3'utr CG9281 FlyBase G67641.1 TATCCCATATCCAGTGGATAGATAGCTGCCAACGGCCACACACTCGCAC 11 15706916 0.951827528 4 10 44 1 1.146128036 0 0.272727273 0.428571429 11 0 0 14 X:15706881-15706929 6 CG9281 FBtr0074057|FBtr0340308|FBtr0074056 15705804|15706444|15705804 15706932|15706932|15706932 CCAGTG 6mer2-7 dme-miR-318-3p X - 15706893 15706929 3'utr CG9281 FlyBase G50907.1 TATCCCATATCCAGTGGATAGATAGCTGCCAACGGCC 7 15706915 0.968875269 3 6 31 1 1.113943352 0 0.571428571 0.769230769 7 0 0 13 X:15706893-15706929 6 8 2598 FBgn0030672 2569.26 100.7833333 155.7866667 0.003113737 0.079378204 0.051352277 -3 -4 -3.5 0.25 dme-miR-8-3p 6mer3-8 CAGTAT X 15712115 15712120 + X_15712115_15712120_+ 0.851789434 0.94505803 0.898423732 0.06595086 CG15601 FBtr0074055|FBtr0339684|FBtr0339685|FBtr0339683 15712008|15712008|15712008|15712008 15712186|15712186|15712309|15712186 X + 15712083 15712137 3'utr CG15601 FlyBase G61595.1 TCCAGGGGATATTTATCAACCCGTTTGCCATTCAGTATATGTAGTCAAGCTAGTT 23 15712113 0.99188917 4 18 197 0.75 1.322219295 0.357142857 0.217391304 0.357142857 23 7 0 21 X:15712083-15712137 6 CG15601 FBtr0339683|FBtr0339685|FBtr0339684|FBtr0074055 15712008|15712008|15712008|15712008 15712186|15712309|15712186|15712186 CAGTAT 6mer3-8 dme-miR-8-3p X + 15712089 15712137 3'utr CG15601 FlyBase G46517.1 GGATATTTATCAACCCGTTTGCCATTCAGTATATGTAGTCAAGCTAGTT 16 15712113 0.988872975 4 14 135 0.884615385 1.361727836 0.346153846 0.375 0.615384615 16 3 0 23 X:15712089-15712137 6 16.5 2599 FBgn0030673 63.26333333 6.943333333 10.57666667 0.260814585 2.376380221 1.560037819 2 2 2 0.25 dme-miR-184-3p 7mer-A1 CCGTCCA X 15733336 15733342 + X_15733336_15733342_+ 0.792843969 0.78930714 0.791075554 0.002500966 CG8191 FBtr0074083 15733227 15733663 X + 15733293 15733365 3'utr CG8191 FlyBase G61667.1 CTTCTCGCCCTTCTCGGCCAGGATCTCCTCGATGTTGCGCTTGCCGTCCAGATCTGTGAACCAGTTCAGATTG 65 15733334 0.825457773 8 62 461 0.963855422 1.903089987 0.084337349 0.153846154 0.337349398 65 3 0 80 X:15733293-15733365 7 CG8191 FBtr0074083 15733227 15733663 CCGTCCA 7mer-A1 dme-miR-184-3p X + 15733293 15733361 3'utr CG8191 FlyBase G46564.1 CTTCTCGCCCTTCTCGGCCAGGATCTCCTCGATGTTGCGCTTGCCGTCCAGATCTGTGAACCAGTTCAG 37 15733334 0.974929206 5 34 264 0.905660377 1.079181246 0.188679245 0.351351351 0.547169811 37 2 3 48 X:15733293-15733361 7 47.5 2600 FBgn0030675 21.07666667 1.743333333 2.686666667 2.253677052 27.24665392 17.67990074 2 2 2 0.25 dme-miR-307a-3p 6mer2-7 GTTGTG X 15735658 15735663 + X_15735658_15735663_+ 0.826605377 0.823369056 0.824987217 0.00228841 l(1)G0136 FBtr0074084|FBtr0332613 15735491|15735491 15735780|15735780 X + 15735647 15735758 3'utr l(1)G0136 FlyBase G61671.1 CTAAATATTAAGTTGTGTTCTATAGTTAAATTTTAGTTGTAGCGCTAGGTAAGTGACGCACCCGCTTCCTTGCCGCAGGCTGGCAGTTTGTCCTCTTTAGCCCTAGTTCAAT 17 15735659 0.991393947 9 17 186 1 1.255272505 0.055555556 0.058823529 0.111111111 17 0 0 18 X:15735647-15735758 6 l(1)G0136 FBtr0332613|FBtr0074084 15735491|15735491 15735780|15735780 GTTGTG 6mer2-7 dme-miR-307a-3p X + 15735649 15735701 3'utr l(1)G0136 FlyBase G46567.1 AAATATTAAGTTGTGTTCTATAGTTAAATTTTAGTTGTAGCGCTAGGTAAGTG 11 15735659 0.993122932 7 10 115 0.842105263 1.204119983 0.105263158 0.454545455 0.684210526 11 3 0 16 X:15735649-15735701 6 8.5 2601 FBgn0026666 97.33333333 15.83666667 24.21333333 0.087328767 0.53672911 0.351046256 -1 -1 -1 0.25 dme-miR-304-5p 7mer-m8 TGAGATT X 15741420 15741426 - X_15741420_15741426_- 0.610237959 0.617858491 0.614048225 0.005388507 CG8944 FBtr0074201 15741341 15743214 X - 15741403 15741453 3'utr CG8944 FlyBase G67665.1 AATTTTATTTATCTTAGTAATACCGAATGAGATTTTAGTACCATACAATAT 50 15741426 0.877165987 4 49 390 0.983050847 1.763427994 0.169491525 0.14 0.271186441 50 1 0 58 X:15741403-15741453 7 CG8944 FBtr0074201 15741341 15743214 TGAGATT 7mer-m8 dme-miR-304-5p X - 15741407 15741447 3'utr CG8944 FlyBase G50924.1 ATTTATCTTAGTAATACCGAATGAGATTTTAGTACCATACA 23 15741426 0.853096921 4 22 173 1 1.62324929 0.023809524 0.608695652 0.785714286 23 0 0 42 X:15741407-15741447 7 35.5 2602 FBgn0030680 574.6266667 15.99666667 24.55666667 0.061779242 2.219212336 1.445635944 0 0 0 0.25 dme-miR-305-3p 6mer3-8 ATGTGC X 15742210 15742215 - X_15742210_15742215_- 0.569802635 0.855937618 0.712870126 0.202327999 CG8944 FBtr0074201 15741341 15743214 X - 15742184 15742217 3'utr CG8944 FlyBase G67670.1 TAATGTGCAGGACGTTGCGTGGCCATTGACGCAT 9 15742214 0.912502726 2 9 53 1 1 0 0.111111111 0.2 9 0 0 10 X:15742184-15742217 6 CG8944 FBtr0074201 15741341 15743214 ATGTGC 6mer3-8 dme-miR-305-3p X - 15742182 15742218 3'utr CG8944 FlyBase G50929.1 ATAATGTGCAGGACGTTGCGTGGCCATTGACGCATTG 8 15742212 0.854036745 4 8 57 1 1.176091259 0 0.625 0.8 8 0 0 15 X:15742182-15742218 6 8.5 2603 FBgn0030680 574.6266667 15.99666667 24.55666667 0.014792213 0.5313607 0.346138184 -1 -3 -2 0.25 dme-miR-184-3p 6mer2-7 CCGTCC X 15742467 15742472 - X_15742467_15742472_- 0.997606584 0.990708564 0.994157574 0.004877623 CG8944 FBtr0074201 15741341 15743214 X - 15742396 15742538 3'utr CG8944 FlyBase G67672.1 TCTTCTCTCCAGACACACACAGCATTACAATCTGATTATTGATGTAAGAATTGTATACATTCCTTCCCGTCCCGCGATAATCGATGTGAGCGAGTAGATGCATTCCAGAACTAAGTATTTCATAAAGTATTCTATGTACTAAC 57 15742476 0.977225945 12 56 368 0.985714286 1.838849091 0.085714286 0.210526316 0.357142857 57 1 0 69 X:15742396-15742538 6 CG8944 FBtr0074201 15741341 15743214 CCGTCC 6mer2-7 dme-miR-184-3p X - 15742392 15742520 3'utr CG8944 FlyBase G50931.1 ACAGCATTACAATCTGATTATTGATGTAAGAATTGTATACATTCCTTCCCGTCCCGCGATAATCGATGTGAGCGAGTAGATGCATTCCAGAACTAAGTATTTCATAAAGTATTCTATGTACTAACTATA 46 15742475 0.977517176 12 42 283 0.940298507 1.498310554 0.28358209 0.260869565 0.492537313 46 3 1 63 X:15742392-15742520 6 37 2604 FBgn0030680 574.6266667 15.99666667 24.55666667 0.064389633 2.312981871 1.506719153 4 3 3.5 0.25 dme-miR-33-5p 7mer-A1 AATGCAA X 15742708 15742714 - X_15742708_15742714_- 0.563876788 0.738102006 0.650989397 0.12319582 CG8944 FBtr0074201 15741341 15743214 X - 15742669 15742780 3'utr CG8944 FlyBase G67673.1 TCTATTCGAATCCACTTACCTGTAGACGTACTTAAACACAAAAAGTATTTAACAACAACGCCCATGAATGCAACTTTAGTTCTAAGAAATTGGTAGAACACTTACACTTCCT 138 15742716 0.961568986 15 124 764 0.896969697 1.392110465 0.066666667 0.173913043 0.309090909 138 12 5 148 X:15742669-15742780 7 CG8944 FBtr0074201 15741341 15743214 AATGCAA 7mer-A1 dme-miR-33-5p X - 15742661 15742737 3'utr CG8944 FlyBase G50932.1 AGTATTTAACAACAACGCCCATGAATGCAACTTTAGTTCTAAGAAATTGGTAGAACACTTACACTTCCTTTGACTTC 50 15742716 0.97091796 7 45 263 0.9 1.799340549 0 0.34 0.528571429 50 7 0 63 X:15742661-15742737 7 69.5 2605 FBgn0030680 574.6266667 15.99666667 24.55666667 0.120948094 4.344655136 2.830188679 2 2 2 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 15751631 15751637 + X_15751631_15751637_+ 0.463856842 0.479926994 0.471891918 0.011363347 CG8239 FBtr0346188|FBtr0346188|FBtr0346188 15750934|15750934|15750934 15751737|15751737|15751737 X + 15751612 15751654 3'utr CG8239 FlyBase G61696.1 TTTAGGTTTGCGACCAACTTGTGATAAAAAAAAACCGCCCAAA 17 15751630 0.967457038 3 16 89 0.95 0.977723605 0.1 0.176470588 0.3 17 0 1 19 X:15751612-15751654 7 CG8239 FBtr0346188|FBtr0346188|FBtr0346188 15750934|15750934|15750934 15751737|15751737|15751737 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X + 15751612 15751651 3'utr CG8239 FlyBase G46588.1 TTTAGGTTTGCGACCAACTTGTGATAAAAAAAAACCGCCC 13 15751630 0.977635094 3 11 76 0.913043478 1.021189299 0 0.384615385 0.652173913 13 1 1 21 X:15751612-15751651 7 15 2606 FBgn0030683 250.2766667 19.80666667 30.47 0.059933673 0.757320767 0.492287496 1 1 1 0.25 dme-miR-308-3p 7mer-m1 TGTGATT X 15793951 15793957 - X_15793951_15793957_- 0.521073183 0.508108632 0.514590908 0.009167357 CG8974 FBtr0074186|FBtr0074187|FBtr0074189|FBtr0074185|FBtr0074188 15793719|15793719|15793719|15793719|15793719 15794100|15794100|15794100|15794100|15794100 X - 15793916 15793976 3'utr CG8974 FlyBase G67727.1 GTTGGGCAATAGTCGTTGGTGTGATTAATTAACATAAATTGTTAGCATTCGGTTATAATTG 24 15793950 0.990269412 8 22 223 0.896551724 1.414973348 0.344827586 0.208333333 0.344827586 24 3 0 26 X:15793916-15793976 7 CG8974 FBtr0074185|FBtr0074188|FBtr0074187|FBtr0074189|FBtr0074186 15793719|15793719|15793719|15793719|15793719 15794100|15794100|15794100|15794100|15794100 TGTGATT 7mer-m1 dme-miR-308-3p X - 15793916 15793986 3'utr CG8974 FlyBase G50962.1 TCTTAAACTCGTTGGGCAATAGTCGTTGGTGTGATTAATTAACATAAATTGTTAGCATTCGGTTATAATTG 23 15793950 0.9882527 6 22 199 1 1.51851394 0.272727273 0.260869565 0.484848485 23 0 0 33 X:15793916-15793986 7 19 2607 FBgn0030693 519 47.39666667 72.25333333 0.036608863 0.400872073 0.262963646 -7 -7 -7 0.25 dme-miR-308-3p 7mer-m1 TGTGATT X 15797138 15797144 - X_15797138_15797144_- 0.505445602 0.446096372 0.475770987 0.041966222 CG32581 FBtr0113439|FBtr0074184 15796906|15796906 15797252|15797252 X - 15797103 15797155 3'utr CG32581 FlyBase G67735.1 ATAGTCGTTGGTGTGATTAATTAACATAAATTGTTAGCATTCGGTTATAATTG 8 15797137 0.986915946 5 8 75 1 1 0.2 0.25 0.4 8 0 0 10 X:15797103-15797155 7 CG32581 FBtr0074184|FBtr0113439 15796906|15796906 15797252|15797252 TGTGATT 7mer-m1 dme-miR-308-3p X - 15797123 15797154 3'utr CG32581 FlyBase G50969.1 TAGTCGTTGGTGTGATTAATTAACATAAATTG 9 15797136 0.74042703 3 9 75 1 1.113943352 0.076923077 0.222222222 0.461538462 9 0 0 13 X:15797123-15797154 7 8 2608 FBgn0052581 0 0 0 Inf Inf Inf -7 -8 -7.5 0.25 dme-miR-282-5p 6mer2-7 GAGGCT X 15825052 15825057 + X_15825052_15825057_+ 0.857594424 0.862285082 0.859939753 0.003316826 sd FBtr0112826|FBtr0074101|FBtr0308134|FBtr0310311|FBtr0074100|FBtr0346799|FBtr0308133|FBtr0308130|FBtr0308129|FBtr0112824|FBtr0112825|FBtr0112827|FBtr0074099|FBtr0308128|FBtr0340115|FBtr0310312|FBtr0310313|FBtr0308131|FBtr0308132|FBtr0301543|FBtr0301544 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15825722|15825722|15825722|15825722|15825722|15827682|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825495|15825495|15827681|15826608|15825722|15825722 X + 15825032 15825073 3'utr sd FlyBase G61753.1 ACAAGCAACCACAACCATTCGAGGCTGAGCAACACGAACACG 42 15825049 0.803691446 2 41 83 0.980392157 1.698970004 0.156862745 0.214285714 0.352941176 42 1 0 50 X:15825032-15825073 6 sd FBtr0346799|FBtr0310313|FBtr0301543|FBtr0308130|FBtr0308132|FBtr0074101|FBtr0308129|FBtr0112824|FBtr0310311|FBtr0074099|FBtr0308128|FBtr0308131|FBtr0074100|FBtr0301544|FBtr0308133|FBtr0112825|FBtr0112827|FBtr0112826|FBtr0340115|FBtr0310312|FBtr0308134 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15827682|15825495|15825722|15825722|15826608|15825722|15825722|15825722|15825722|15825722|15825722|15827681|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825495|15825722 GAGGCT 6mer2-7 dme-miR-282-5p X + 15825034 15825064 3'utr sd FlyBase G46627.1 AAGCAACCACAACCATTCGAGGCTGAGCAAC 19 15825050 0.822868326 2 18 39 0.891891892 1.51851394 0.081081081 0.684210526 0.837837838 19 4 0 33 X:15825034-15825064 6 30.5 2609 FBgn0003345 3188.213333 125.3966667 192.3633333 0.009566487 0.243228156 0.158554125 3 2 2.5 0.25 dme-miR-317-3p 7mer-A1 GTGTTCA X 15825573 15825579 + X_15825573_15825579_+ 0.815887198 0.819836711 0.817861954 0.002792718 sd FBtr0112826|FBtr0074101|FBtr0308134|FBtr0310311|FBtr0074100|FBtr0346799|FBtr0308133|FBtr0308130|FBtr0308129|FBtr0112824|FBtr0112825|FBtr0112827|FBtr0074099|FBtr0308128|FBtr0340115|FBtr0308131|FBtr0308132|FBtr0301543|FBtr0301544 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15825722|15825722|15825722|15825722|15825722|15827682|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15827681|15826608|15825722|15825722 X + 15825515 15825616 3'utr sd FlyBase G61757.1 AAAAAAACCACATGGCAGGGGACAATGGAAGAGCCTCAAAACAAGAGATGATTGATTGGTGTTCAGTATCGAAATCAGATTTTTATTTGTGCAAAATAAAAA 36 15825568 0.94907559 15 33 206 0.928571429 1.591064607 0.166666667 0.111111111 0.238095238 36 3 0 39 X:15825515-15825616 7 sd FBtr0346799|FBtr0301543|FBtr0308130|FBtr0308132|FBtr0074101|FBtr0308129|FBtr0112824|FBtr0310311|FBtr0074099|FBtr0308128|FBtr0308131|FBtr0074100|FBtr0301544|FBtr0308133|FBtr0112825|FBtr0112827|FBtr0112826|FBtr0340115|FBtr0308134 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15827682|15825722|15825722|15826608|15825722|15825722|15825722|15825722|15825722|15825722|15827681|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722 GTGTTCA 7mer-A1 dme-miR-317-3p X + 15825557 15825613 3'utr sd FlyBase G46631.1 AAGAGATGATTGATTGGTGTTCAGTATCGAAATCAGATTTTTATTTGTGCAAAATAA 7 15825573 0.982724955 4 7 57 1 0.954242509 0.222222222 0.285714286 0.444444444 7 0 0 9 X:15825557-15825613 7 10 2610 FBgn0003345 3188.213333 125.3966667 192.3633333 0.003136553 0.079746936 0.051984959 5 0 2.5 0.25 dme-bantam-3p 8mer-A1 TGATCTCA X 15825755 15825762 + X_15825755_15825762_+ 0.628712865 0.628557346 0.628635105 0.000110026 sd FBtr0346799|FBtr0308131|FBtr0308132 15824447|15824447|15824447 15827682|15827681|15826608 X + 15825728 15825784 3'utr sd FlyBase G61759.1 AAAAACAAAAAAAAAAATACATTTAAATGATCTCAAAGTTACTTAAAACATATTTTT 691 15825754 0.966940761 12 668 4799 0.97260274 2.152288344 0.180365297 0.218523878 0.383561644 691 19 5 852 X:15825728-15825784 8 sd FBtr0346799|FBtr0308132|FBtr0308131 15824447|15824447|15824447 15827682|15826608|15827681 TGATCTCA 8mer-A1 dme-bantam-3p X + 15825730 15825801 3'utr sd FlyBase G46633.1 AAACAAAAAAAAAAATACATTTAAATGATCTCAAAGTTACTTAAAACATATTTTTTGTGTATAATTTTTTTT 588 15825754 0.981386736 13 561 4084 0.957972806 1.986211716 0.196538937 0.294217687 0.487021014 588 27 7 775 X:15825730-15825801 8 637.5 2611 FBgn0003345 3188.213333 125.3966667 192.3633333 0.199955252 5.083867195 3.314041137 1 1 1 0.25 dme-miR-317-3p 6mer3-8 TGTGTT X 15826354 15826359 + X_15826354_15826359_+ 0.990682429 0.849387254 0.920034841 0.099910723 sd FBtr0346799|FBtr0308131|FBtr0308132 15824447|15824447|15824447 15827682|15827681|15826608 X + 15826323 15826363 3'utr sd FlyBase G61763.2 CAAAGGAGCGAGGGAGCGTAGGAGGATCTTGTGTGTTAAGC 7 15826353 0.976056522 5 6 31 0.875 0.84509804 0.375 0.142857143 0.25 7 1 0 7 X:15826323-15826363 6 sd FBtr0346799|FBtr0308132|FBtr0308131 15824447|15824447|15824447 15827682|15826608|15827681 TGTGTT 6mer3-8 dme-miR-317-3p X + 15826284 15826364 3'utr sd FlyBase G46637.1 TCCTGTCGTGGGAGCGCGAGTGTTGTGAGGTGAGGAGGGCAAAGGAGCGAGGGAGCGTAGGAGGATCTTGTGTGTTAAGCG 14 15826353 0.982937289 5 11 75 0.826086957 1.278753601 0.47826087 0.5 0.695652174 14 4 0 19 X:15826284-15826364 6 7 2612 FBgn0003345 3188.213333 125.3966667 192.3633333 0.002195587 0.055822855 0.036389471 1 1 1 0.25 dme-miR-278-3p 6mer2-7 CCACCG X 15826445 15826450 + X_15826445_15826450_+ 0.997475956 0.984894594 0.991185275 0.008896393 sd FBtr0346799|FBtr0308131|FBtr0308132 15824447|15824447|15824447 15827682|15827681|15826608 X + 15826391 15826464 3'utr sd FlyBase G61764.1 CATAGTGGCAAAAATGGATATGTAAGTAATTGAATTAAGCATGTGTCGAATGATCCACCGTTAATTAAATTATT 42 15826451 0.979624202 8 42 292 1 1.698970004 0 0.166666667 0.3 42 0 0 50 X:15826391-15826464 6 sd FBtr0346799|FBtr0308132|FBtr0308131 15824447|15824447|15824447 15827682|15826608|15827681 CCACCG 6mer2-7 dme-miR-278-3p X + 15826416 15826463 3'utr sd FlyBase G46638.1 GTAATTGAATTAAGCATGTGTCGAATGATCCACCGTTAATTAAATTAT 23 15826451 0.984871112 5 21 171 0.9375 1.477121255 0.0625 0.260869565 0.46875 23 2 0 30 X:15826416-15826463 6 31 2613 FBgn0003345 3188.213333 125.3966667 192.3633333 0.009723314 0.247215503 0.161153373 -6 -6 -6 0.25 dme-miR-283-5p 7mer-m8 TGATATT X 15864494 15864500 + X_15864494_15864500_+ 0.350388958 0.472647917 0.411518437 0.086450097 Gbeta13F FBtr0074111|FBtr0074106|FBtr0346794|FBtr0074110|FBtr0331597|FBtr0074108 15862795|15862795|15862795|15862795|15862795|15862795 15866084|15866084|15866084|15866084|15866084|15866175 X + 15864465 15864513 3'utr Gbeta13F FlyBase G61794.1 AAAAACTAAAGCTTATATTGTGAAAATACTGATATTGTCTTGCTGTCTT 11 15864480 0.981796973 6 10 85 0.928571429 0.812913357 0.071428571 0.272727273 0.428571429 11 0 1 13 X:15864465-15864513 7 Gbeta13F FBtr0074108|FBtr0331597|FBtr0074110|FBtr0346794|FBtr0074106|FBtr0074111 15862795|15862795|15862795|15862795|15862795|15862795 15866175|15866084|15866084|15866084|15866084|15866084 TGATATT 7mer-m8 dme-miR-283-5p X + 15864435 15864513 3'utr Gbeta13F FlyBase G46664.1 AACGAAGCGAAACGATTGTAGAATGCAAACAAAAACTAAAGCTTATATTGTGAAAATACTGATATTGTCTTGCTGTCTT 14 15864481 0.981809468 7 14 97 1 1.342422681 0 0.428571429 0.636363636 14 0 0 22 X:15864435-15864513 7 7 2614 FBgn0001105 5526.04 154.0466667 236.8166667 0.00126673 0.045440776 0.02955873 14 13 13.5 0.25 dme-miR-308-3p 7mer-m1 TGTGATT X 15864781 15864787 + X_15864781_15864787_+ 0.521022821 0.520656531 0.520839676 0.000259013 Gbeta13F FBtr0074111|FBtr0074106|FBtr0346794|FBtr0074110|FBtr0331597|FBtr0074108 15862795|15862795|15862795|15862795|15862795|15862795 15866084|15866084|15866084|15866084|15866084|15866175 X + 15864698 15864809 3'utr Gbeta13F FlyBase G61796.1 TGTAATAAACTGATTGGTTTATTGACCTTCTTGAAGTATTCTTTAACGTTATAGTATCTTGGTCCGATAGGTAAATGGTAAATTGTGATTTAAAGTGAATAGTTTTTCAAGC 122 15864780 0.988532762 15 116 1074 0.963768116 1.646730386 0.282608696 0.123966942 0.231884058 121 3 2 133 X:15864698-15864809 7 Gbeta13F FBtr0074108|FBtr0331597|FBtr0074110|FBtr0346794|FBtr0074106|FBtr0074111 15862795|15862795|15862795|15862795|15862795|15862795 15866175|15866084|15866084|15866084|15866084|15866084 TGTGATT 7mer-m1 dme-miR-308-3p X + 15864760 15864803 3'utr Gbeta13F FlyBase G46666.1 TCCGATAGGTAAATGGTAAATTGTGATTTAAAGTGAATAGTTTT 80 15864780 0.653777165 6 80 661 1 2.045322979 0.297297297 0.325 0.513513514 80 0 0 111 X:15864760-15864803 7 97 2615 FBgn0001105 5526.04 154.0466667 236.8166667 0.017553257 0.629679318 0.40959955 1 1 1 0.25 dme-miR-14-3p 6mer3-8 AAGACT X 15876869 15876874 - X_15876869_15876874_- 0.502724571 0.731135883 0.616930227 0.161511179 tay FBtr0074167|FBtr0310065|FBtr0310066|FBtr0340414 15876681|15876366|15876681|15876681 15877234|15877234|15877234|15877234 X - 15876727 15876936 3'utr tay FlyBase G67818.1 GATTACGATGCAGATGCAGATGCAGATGTTTGTGGCAAACAAAAATCAAATTAAAAGAGGTTAAGACTTCCTTATACTTCAGACCTAGCATTCAACCTAAGCACTGAGTCCCCACATTGGCAAAATACTTTCCTCGATCTTAATATGGTCGCGCGTTGAAACGTCACATAAGTAATACGAACTTTACTTATTTTTAATGAATACAAATTA 173 15876876 0.978391699 22 161 1163 0.9375 1.653212514 0.015625 0.098265896 0.1875 173 9 3 180 X:15876727-15876936 6 tay FBtr0310066|FBtr0340414|FBtr0074167|FBtr0310065 15876681|15876681|15876681|15876366 15877234|15877234|15877234|15877234 AAGACT 6mer3-8 dme-miR-14-3p X - 15876757 15876951 3'utr tay FlyBase G51051.1 ACAGATGAAGATGAAGATTACGATGCAGATGCAGATGCAGATGTTTGTGGCAAACAAAAATCAAATTAAAAGAGGTTAAGACTTCCTTATACTTCAGACCTAGCATTCAACCTAAGCACTGAGTCCCCACATTGGCAAAATACTTTCCTCGATCTTAATATGGTCGCGCGTTGAAACGTCACATAAGTAATACGA 97 15876876 0.979746413 21 93 643 0.959459459 2.152288344 0.040540541 0.371134021 0.587837838 97 6 0 142 X:15876757-15876951 6 92 2616 FBgn0260938 850.7 11.95 18.32333333 0.108146233 7.69874477 5.020920502 2 2 2 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 15887724 15887729 - X_15887724_15887729_- 0.522576193 0.494085823 0.508331008 0.020145755 MSBP FBtr0301598|FBtr0301598|FBtr0301598|FBtr0333719|FBtr0333719|FBtr0333719|FBtr0074166|FBtr0074166|FBtr0074166 15887565|15887565|15887565|15887565|15887565|15887565|15887565|15887565|15887565 15888035|15888035|15888035|15888035|15888035|15888035|15888035|15888035|15888035 X - 15887570 15887783 3'utr MSBP FlyBase G67853.1 CTTAGAGTGCAGCCTTGACAAAAGCTATAGTTGTTACTATAATTCACGTTGTGATGTGATCTTGTTCCATATATTATAGTCGTATATTCATACAAATGTAACAAACGGAAATCATAAAATTATTTAAGGAGGAGGCCAATGTGTGGAGGGTATGGGAGTCATTTTCGTGGCAATATAAATTTAAATGTAACTATATTTGAAATACAAATTAAAT 109 15887722 0.986928977 32 109 941 1 2.123851641 0.210526316 0.174311927 0.323308271 109 0 0 133 X:15887570-15887783 6 MSBP FBtr0301598|FBtr0301598|FBtr0301598|FBtr0333719|FBtr0333719|FBtr0333719|FBtr0074166|FBtr0074166|FBtr0074166 15887565|15887565|15887565|15887565|15887565|15887565|15887565|15887565|15887565 15888035|15888035|15888035|15888035|15888035|15888035|15888035|15888035|15888035 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 15887693 15887769 3'utr MSBP FlyBase G51080.1 TTGACAAAAGCTATAGTTGTTACTATAATTCACGTTGTGATGTGATCTTGTTCCATATATTATAGTCGTATATTCAT 55 15887722 0.991410554 12 50 541 0.931818182 1.436692598 0.125 0.454545455 0.659090909 55 4 2 82 X:15887693-15887769 6 60.5 2617 FBgn0030703 1227.653333 105.4533333 161.41 0.049281013 0.573713491 0.374821882 -7 -7 -7 0.25 dme-bantam-3p 6mer3-8 TGATCT X 15906135 15906140 + X_15906135_15906140_+ 0.967687046 0.759016514 0.86335178 0.147552326 shi FBtr0333717|FBtr0340413|FBtr0301594|FBtr0301596|FBtr0074123|FBtr0301595|FBtr0074124 15905923|15905923|15905923|15905923|15905923|15905923|15905923 15906716|15906716|15906252|15906252|15906252|15906252|15906252 X + 15906118 15906154 3'utr shi FlyBase G61863.1 AAAAAGTGTTTTACACATGATCTTTTGGACAATTCAA 11 15906135 0.887108386 3 11 108 1 1.041392685 0.636363636 0 0 11 0 0 11 X:15906118-15906154 6 shi FBtr0074123|FBtr0301595|FBtr0340413|FBtr0074124|FBtr0301594|FBtr0301596|FBtr0333717 15905923|15905923|15905923|15905923|15905923|15905923|15905923 15906252|15906252|15906716|15906252|15906252|15906252|15906716 TGATCT 6mer3-8 dme-bantam-3p X + 15906120 15906225 3'utr shi FlyBase G46719.1 AAAGTGTTTTACACATGATCTTTTGGACAATTCAACATTCAAATTAGTGCTTTCGAATTAAGTTTATCGGGGATACCATTTACTTTTTAAAGTATATTTGAACGTG 9 15906135 0.988686838 7 9 84 1 1 0.3 0.111111111 0.2 9 0 0 10 X:15906120-15906225 6 7.5 2618 FBgn0003392 1552.753333 51.10333333 78.22666667 0.00483013 0.146761464 0.095875234 0 0 0 0.25 dme-miR-965-3p 7mer-m8 TACGCTT X 15944222 15944228 + X_15944222_15944228_+ 0.558278964 0.619321622 0.588800293 0.043163636 CG8924 FBtr0074130 15944054 15944449 X + 15944203 15944279 3'utr CG8924 FlyBase G61872.1 ATACATAGGTTTACTTAATTACGCTTTGGAGATGCCACAGTTTTATCCTTGGTTGAAAAACTCTTGCCGTTCAATCA 38 15944221 0.833567663 6 36 342 0.954545455 1.62324929 0.431818182 0.131578947 0.25 38 2 0 42 X:15944203-15944279 7 CG8924 FBtr0074130 15944054 15944449 TACGCTT 7mer-m8 dme-miR-965-3p X + 15944203 15944243 3'utr CG8924 FlyBase G46725.1 ATACATAGGTTTACTTAATTACGCTTTGGAGATGCCACAGT 27 15944221 0.658914449 5 26 259 0.955555556 1.633468456 0.577777778 0.407407407 0.644444444 27 2 0 43 X:15944203-15944243 7 29.5 2619 FBgn0030710 226.3333333 10.62 16.19333333 0.130338733 2.777777778 1.82173734 1 1 1 0.25 dme-miR-79-3p 6mer2-7 AGCTTT X 15995132 15995137 + X_15995132_15995137_+ 0.826818355 0.914238354 0.870528355 0.061815275 exd FBtr0074137|FBtr0333322|FBtr0074135|FBtr0333323 15994971|15994971|15994971|15994971 15995996|15996509|15995996|15996509 X + 15995058 15995160 3'utr exd FlyBase G61892.1 AGTTTTTTCATAATTATGCGGCTTATATTTGCTTCTTCGCCAAGAACAACAATTCTTAAGGGATTTTTAAATTCAGCTTTCTGTCCTTTGGTTTCGAGTCAGA 42 15995136 0.97312565 14 37 397 0.910714286 1.40654018 0.267857143 0.214285714 0.410714286 42 4 1 51 X:15995058-15995160 6 exd FBtr0074135|FBtr0333323|FBtr0074137|FBtr0333322 15994971|15994971|15994971|15994971 15995996|15996509|15995996|15996509 AGCTTT 6mer2-7 dme-miR-79-3p X + 15995044 15995161 3'utr exd FlyBase G46740.1 AAAATCTAACATGCAGTTTTTTCATAATTATGCGGCTTATATTTGCTTCTTCGCCAAGAACAACAATTCTTAAGGGATTTTTAAATTCAGCTTTCTGTCCTTTGGTTTCGAGTCAGAT 28 15995136 0.993066792 11 23 279 0.88372093 1.579783597 0.162790698 0.321428571 0.558139535 28 5 0 38 X:15995044-15995161 6 20 2620 FBgn0000611 1497 64.64333333 99.30333333 0.013360053 0.309389986 0.201403108 -4 -4 -4 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 16093289 16093295 - X_16093289_16093295_- 0.710919162 0.755469996 0.733194579 0.031502173 CG42354 FBtr0299950|FBtr0299950|FBtr0299950|FBtr0310316|FBtr0310316|FBtr0310316|FBtr0299951|FBtr0299951|FBtr0299951|FBtr0310314|FBtr0310314|FBtr0310314|FBtr0310315|FBtr0310315|FBtr0310315|FBtr0299949|FBtr0299949|FBtr0299949 16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057 16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102 X - 16093272 16093305 3'utr CG42354 FlyBase G67989.1 TATATATATTTGTGATACCTATACTAATATTTTT 82 16093297 0.723195785 5 73 863 0.894736842 1.452297671 0 0.134146341 0.252631579 82 8 2 85 X:16093272-16093305 7 CG42354 FBtr0310316|FBtr0310316|FBtr0310316|FBtr0299950|FBtr0299950|FBtr0299950|FBtr0299949|FBtr0299949|FBtr0299949|FBtr0310315|FBtr0310315|FBtr0310315|FBtr0310314|FBtr0310314|FBtr0310314|FBtr0299951|FBtr0299951|FBtr0299951 16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057|16093057 16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102|16094102 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 16093273 16093305 3'utr CG42354 FlyBase G51174.1 TATATATATTTGTGATACCTATACTAATATTTT 49 16093297 0.699319491 7 44 496 0.880597015 1.469822016 0 0.326530612 0.507462687 49 7 1 59 X:16093273-16093305 7 65.5 2621 FBgn0259700 906.0733333 39.32 60.44666667 0.072289954 1.665818922 1.083599868 2 2 2 0.25 dme-miR-276a-3p 7mer-A1 GTTCCTA X 16093917 16093923 - X_16093917_16093923_- 0.703610861 0.737743767 0.720677314 0.024135605 CG42354 FBtr0299950|FBtr0310316|FBtr0299951|FBtr0310314|FBtr0310315|FBtr0299949 16093057|16093057|16093057|16093057|16093057|16093057 16094102|16094102|16094102|16094102|16094102|16094102 X - 16093900 16094015 3'utr CG42354 FlyBase G67994.1 CGCAACAGAGGTCACATATACATATATACTTTAATCCCAAGATATACTTAAGGACAGAGTGTGCTAGTAAAGCGCACACCGAATTTGCGCTGGTTCCTAACTTATACATGTGTGTG 40 16093926 0.934980454 13 40 215 1 1.672097858 0.063829787 0.15 0.276595745 40 0 0 47 X:16093900-16094015 7 CG42354 FBtr0310316|FBtr0299950|FBtr0299949|FBtr0310315|FBtr0310314|FBtr0299951 16093057|16093057|16093057|16093057|16093057|16093057 16094102|16094102|16094102|16094102|16094102|16094102 GTTCCTA 7mer-A1 dme-miR-276a-3p X - 16093889 16093998 3'utr CG42354 FlyBase G51179.1 ATACATATATACTTTAATCCCAAGATATACTTAAGGACAGAGTGTGCTAGTAAAGCGCACACCGAATTTGCGCTGGTTCCTAACTTATACATGTGTGTGTTTGTAATATT 22 16093926 0.975771596 10 20 128 0.96875 1.491361694 0.15625 0.318181818 0.53125 22 1 0 31 X:16093889-16093998 7 11.5 2622 FBgn0259700 906.0733333 39.32 60.44666667 0.012692129 0.292472024 0.190250358 3 3 3 0.25 dme-bantam-3p 6mer3-8 TGATCT X 16277537 16277542 + X_16277537_16277542_+ 0.940170581 0.995523862 0.967847221 0.039140694 Prosalpha4 FBtr0074210 16277308 16277587 X + 16277487 16277553 3'utr Prosalpha4 FlyBase G61937.1 AATTACCACTTTCTATTCTTCGGAACCCTGTAAAACGGTATGAAAATATTTGATCTGTATAAAATAC 18 16277537 0.691296933 8 17 141 0.952380952 1.301029996 0.19047619 0.111111111 0.238095238 18 1 0 20 X:16277487-16277553 6 Prosalpha4 FBtr0074210 16277308 16277587 TGATCT 6mer3-8 dme-bantam-3p X + 16277523 16277551 3'utr Prosalpha4 FlyBase G46771.1 GGTATGAAAATATTTGATCTGTATAAAAT 6 16277536 0.720683801 2 5 51 0.9 0.954242509 0.1 0.5 0.7 6 1 0 9 X:16277523-16277551 6 8 2623 FBgn0004066 1281.22 133.8966667 204.6 0.006244049 0.059747567 0.039100684 0 1 0.5 0.25 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA X 16284201 16284208 + X_16284201_16284208_+ 0.674749349 0.674967108 0.674858229 0.000154008 eas FBtr0308617|FBtr0343520|FBtr0308618 16283732|16283732|16283732 16285618|16285618|16285618 X + 16284146 16284226 3'utr eas FlyBase G61942.1 GGCGACCAAACCCATGCCGATGATTTGGAAGAAGACGCAGAGCTTTCTTGATTTAGTACCTGAACGTTTTAGTGATGCTGA 23 16284198 0.98959922 11 22 208 0.931034483 1.431363764 0.172413793 0.260869565 0.413793103 23 2 0 27 X:16284146-16284226 8 eas FBtr0308618|FBtr0343520|FBtr0308617 16283732|16283732|16283732 16285618|16285618|16285618 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" X + 16284156 16284225 3'utr eas FlyBase G46774.1 CCCATGCCGATGATTTGGAAGAAGACGCAGAGCTTTCTTGATTTAGTACCTGAACGTTTTAGTGATGCTG 9 16284198 0.989194274 7 8 75 0.857142857 1.079181246 0.357142857 0.444444444 0.642857143 9 2 0 12 X:16284156-16284225 8 13 2624 FBgn0000536 1202.386667 57.26666667 87.69666667 0.01081183 0.227008149 0.148238245 3 3 3 0.25 dme-bantam-3p 6mer3-8 TGATCT X 16284434 16284439 + X_16284434_16284439_+ 0.966597106 0.973487649 0.970042377 0.004872319 eas FBtr0308617|FBtr0343520|FBtr0308618 16283732|16283732|16283732 16285618|16285618|16285618 X + 16284374 16284475 3'utr eas FlyBase G61943.1 ACCTCGAGGCTCTGGACAGTCCGATTGTCTTCTCCCACAACGATCTTCTGCTGGGAAATGTGATCTATACGCAGAGCCTGAATACGGTGAACTTCATCGACT 17 16284440 0.977931239 7 15 104 0.894736842 1.230448921 0.315789474 0.117647059 0.210526316 17 2 0 17 X:16284374-16284475 6 eas FBtr0308618|FBtr0343520|FBtr0308617 16283732|16283732|16283732 16285618|16285618|16285618 TGATCT 6mer3-8 dme-bantam-3p X + 16284369 16284457 3'utr eas FlyBase G46775.1 TGAATACCTCGAGGCTCTGGACAGTCCGATTGTCTTCTCCCACAACGATCTTCTGCTGGGAAATGTGATCTATACGCAGAGCCTGAATA 20 16284440 0.953240683 9 17 96 0.892857143 1.096910013 0.25 0.368421053 0.571428571 19 2 1 25 X:16284369-16284457 6 11 2625 FBgn0000536 1202.386667 57.26666667 87.69666667 0.009148471 0.192083818 0.125432362 -6 -6 -6 0.25 dme-miR-318-3p 8mer-A1 CCCAGTGA X 16285152 16285159 + X_16285152_16285159_+ 0.669064268 0.635204867 0.652134567 0.023942211 eas FBtr0308617|FBtr0343519|FBtr0074212|FBtr0343520|FBtr0308618|FBtr0074214|FBtr0074211|FBtr0308619 16283732|16285102|16285102|16283732|16283732|16285102|16285102|16285102 16285618|16285618|16285618|16285618|16285618|16285618|16285618|16285618 X + 16285146 16285196 3'utr eas FlyBase G61945.1 TATGTGCCCAGTGATATATGTATAAACTAAGGCTGGAACGGGTCTCAATGT 22 16285169 0.765860597 6 14 135 0.615384615 0.903089987 0.423076923 0.090909091 0.230769231 22 9 1 16 X:16285146-16285196 8 eas FBtr0074211|FBtr0308619|FBtr0308618|FBtr0074214|FBtr0074212|FBtr0343520|FBtr0308617|FBtr0343519 16285102|16285102|16283732|16285102|16285102|16283732|16283732|16285102 16285618|16285618|16285618|16285618|16285618|16285618|16285618|16285618 CCCAGTGA 8mer-A1 dme-miR-318-3p X + 16285144 16285206 3'utr eas FlyBase G46777.1 ATTATGTGCCCAGTGATATATGTATAAACTAAGGCTGGAACGGGTCTCAATGTTATACATATG 19 16285172 0.811143602 8 16 106 0.827586207 0.77815125 0.551724138 0.473684211 0.655172414 19 2 3 24 X:16285144-16285206 8 7 2626 FBgn0000536 1202.386667 57.26666667 87.69666667 0.005821755 0.122235157 0.079820594 -17 -20 -18.5 0.25 dme-miR-965-3p 7mer-m8 TACGCTT X 16293262 16293268 + X_16293262_16293268_+ 0.598609885 0.543155498 0.570882692 0.039212182 caz FBtr0334992|FBtr0334990|FBtr0334991|FBtr0074217 16292078|16293194|16293194|16293194 16293520|16293520|16293520|16293520 X + 16293162 16293336 stop_codon caz FlyBase G61967.1 AAACGATGGAGGCATGCGCTCGAGACCATATTAAGCGCATGGTAGCCAGCCGAACGCGGCACCTATTTTTTTCACTTTTACTTATTAATTGTAGCGAGAGTACGCTTTTAAATGTACTTTTAAAATTAACAGTCAGAGCAACTTTTAAATGATAATTGCCAGCACACGACTTCAT 71 16293269 0.985598263 25 68 552 0.966292135 1.633468456 0.337078652 0.183098592 0.348314607 71 2 1 86 X:16293162-16293336 7 caz FBtr0334991|FBtr0074217|FBtr0334992|FBtr0334990 16293194|16293194|16292078|16293194 16293520|16293520|16293520|16293520 TACGCTT 7mer-m8 dme-miR-965-3p X + 16293228 16293309 3'utr caz FlyBase G46789.1 TTTTTTCACTTTTACTTATTAATTGTAGCGAGAGTACGCTTTTAAATGTACTTTTAAAATTAACAGTCAGAGCAACTTTTAA 42 16293269 0.985810615 13 41 341 0.983870968 1.785329835 0.290322581 0.404761905 0.596774194 42 1 0 61 X:16293228-16293309 7 38 2627 FBgn0011571 288.6766667 20.94333333 31.84666667 0.131635163 1.814419863 1.193217501 -7 -7 -7 0.25 dme-miR-1012-3p 6mer3-8 TTGACT X 16293381 16293386 + X_16293381_16293386_+ 0.987410903 0.977443783 0.982427343 0.007047804 caz FBtr0334992|FBtr0334990|FBtr0334991|FBtr0074217 16292078|16293194|16293194|16293194 16293520|16293520|16293520|16293520 X + 16293365 16293492 3'utr caz FlyBase G61968.1 ACGGTTATCGCTCGTTTTGACTGAATTATATTATATAATTATGTAATCTAATTTAACAACTGTAACTGTAACATGGTACATACGAATAAACATATATATATGTATACATATATAGCTCATATATATGT 37 16293381 0.907989108 18 33 335 0.857142857 1.322219295 0.06122449 0.243243243 0.428571429 37 6 1 42 X:16293365-16293492 6 caz FBtr0334991|FBtr0074217|FBtr0334992|FBtr0334990 16293194|16293194|16292078|16293194 16293520|16293520|16293520|16293520 TTGACT 6mer3-8 dme-miR-1012-3p X + 16293360 16293492 3'utr caz FlyBase G46790.1 CACACACGGTTATCGCTCGTTTTGACTGAATTATATTATATAATTATGTAATCTAATTTAACAACTGTAACTGTAACATGGTACATACGAATAAACATATATATATGTATACATATATAGCTCATATATATGT 32 16293381 0.770261156 16 28 320 0.905660377 1.681241237 0 0.40625 0.641509434 32 5 0 48 X:16293360-16293492 6 20.5 2628 FBgn0011571 288.6766667 20.94333333 31.84666667 0.071013706 0.978831768 0.643709441 0 0 0 0.25 dme-miR-318-3p 6mer3-8 CCCAGT X 16302979 16302984 + X_16302979_16302984_+ 0.571953387 0.634388572 0.60317098 0.044148353 CG3632 FBtr0344216 16302932 16303308 X + 16302969 16303007 3'utr CG3632 FlyBase G61999.1 AGCTTTTTAACCCAGTTAGGCTATGTGGATCCTGCTACA 11 16302985 0.763209204 4 11 92 1 1.079181246 0.166666667 0.090909091 0.166666667 11 0 0 12 X:16302969-16303007 6 CG3632 FBtr0344216 16302932 16303308 CCCAGT 6mer3-8 dme-miR-318-3p X + 16302960 16303005 3'utr CG3632 FlyBase G46814.1 CAAACGAAAAGCTTTTTAACCCAGTTAGGCTATGTGGATCCTGCTA 9 16302993 0.974970901 5 9 60 1 1.079181246 0 0.222222222 0.416666667 9 0 0 12 X:16302960-16303005 6 9 2629 FBgn0030735 647.8533333 19.21 29.39333333 0.013892033 0.468505986 0.30619188 -6 -14 -10 0.25 dme-miR-7-5p 6mer3-8 GTCTTC X 16303078 16303083 + X_16303078_16303083_+ 0.972172614 0.759928814 0.866050714 0.15007903 CG3632 FBtr0344216 16302932 16303308 X + 16303059 16303096 stop_codon CG3632 FlyBase G62000.1 AGGCGAAGGACGATGAGACGTCTTCTGCGATTTCCTAA 43 16303082 0.93661744 5 42 285 0.980769231 1.707570176 0 0.209302326 0.346153846 43 1 0 51 X:16303059-16303096 6 CG3632 FBtr0344216 16302932 16303308 GTCTTC 6mer3-8 dme-miR-7-5p X + 16303028 16303094 stop_codon CG3632 FlyBase G46815.1 CAGGAGTACGCTGCGGTACCTGCAGAATCCCAGGCGAAGGACGATGAGACGTCTTCTGCGATTTCCT 14 16303082 0.977404326 4 14 90 1 1.414973348 0.153846154 0.571428571 0.769230769 14 0 0 26 X:16303028-16303094 6 27 2630 FBgn0030735 647.8533333 19.21 29.39333333 0.0416761 1.405517959 0.918575641 -4 -4 -4 0.25 dme-bantam-3p 6mer3-8 TGATCT X 16317820 16317825 - X_16317820_16317825_- 0.992002642 0.997803902 0.994903272 0.004102139 Cyp1 FBtr0074238 16317671 16318181 X - 16317798 16317874 3'utr Cyp1 FlyBase G68038.1 AAGAAAAACAATGAGACGACAAGAGTCGAGAGGGGCTTAGAAAAATGTTTGATCTTTTGATGTTGGCTTACTTACTA 37 16317826 0.999985575 10 36 351 0.978723404 1.662757832 0.14893617 0.243243243 0.404255319 37 1 0 46 X:16317798-16317874 6 Cyp1 FBtr0074238 16317671 16318181 TGATCT 6mer3-8 dme-bantam-3p X - 16317802 16317876 3'utr Cyp1 FlyBase G51208.1 AGAAGAAAAACAATGAGACGACAAGAGTCGAGAGGGGCTTAGAAAAATGTTTGATCTTTTGATGTTGGCTTACTT 29 16317819 0.987721101 9 27 250 0.934782609 1.156347201 0.239130435 0.379310345 0.608695652 29 1 2 43 X:16317802-16317876 6 27 2631 FBgn0004432 7157.433333 716.86 1097.683333 0.003772302 0.037664258 0.024597258 1 -6 -2.5 0.25 dme-miR-277-3p 7mer-m8 TGCATTT X 16318110 16318116 - X_16318110_16318116_- 0.612684474 0.619970023 0.616327249 0.005151626 Cyp1 FBtr0074238 16317671 16318181 X - 16318100 16318162 3'utr Cyp1 FlyBase G68041.1 AACAGCAACATTGCAAGAAGAAAAATCTGTTAAGACGAAAACCATTTGCATTTTCTCCAAAAC 26 16318117 0.850893062 8 24 139 0.9375 1.477121255 0.125 0.192307692 0.34375 26 2 0 30 X:16318100-16318162 7 Cyp1 FBtr0074238 16317671 16318181 TGCATTT 7mer-m8 dme-miR-277-3p X - 16318100 16318159 3'utr Cyp1 FlyBase G51210.1 AGCAACATTGCAAGAAGAAAAATCTGTTAAGACGAAAACCATTTGCATTTTCTCCAAAAC 19 16318116 0.80387963 8 18 109 0.958333333 1.361727836 0.041666667 0.263157895 0.416666667 19 1 0 23 X:16318100-16318159 7 15 2632 FBgn0004432 7157.433333 716.86 1097.683333 0.002095723 0.020924588 0.013665143 1 0 0.5 0.25 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT X 16321797 16321803 - X_16321797_16321803_- 0.614640086 0.619487641 0.617063863 0.0034277 CG9917 FBtr0331756|FBtr0074237 16321429|16321429 16322047|16322047 X - 16321741 16321830 3'utr CG9917 FlyBase G68048.3 AGGCTAGCCAGCCATATCGTTTTTGTTTGGTGCTTCTAATTTATGTAATTAATTGCCAATTGATGTATGTATGTATGTAGTATTGTAAAC 48 16321804 0.81168328 13 47 592 1 1.770852012 0.169491525 0.166666667 0.322033898 48 0 0 59 X:16321741-16321830 7 CG9917 FBtr0331756|FBtr0074237 16321429|16321429 16322047|16322047 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" X - 16321655 16321831 3'utr CG9917 FlyBase G51220.1 CAGGCTAGCCAGCCATATCGTTTTTGTTTGGTGCTTCTAATTTATGTAATTAATTGCCAATTGATGTATGTATGTATGTAGTATTGTAAACAATGCTTATACTTCCTTCTAGTTTTACTTCTGAATCAGAAATTCTTCTGGCCTTTGTCATGCGTTTATCTAATGCTTTATTTCCGT 49 16321804 0.994765471 14 43 591 0.926470588 1.799340549 0.235294118 0.285714286 0.485294118 49 5 0 63 X:16321655-16321831 7 35.5 2633 FBgn0030740 1612.983333 110.1633333 169.58 0.022008907 0.322248782 0.209340724 1 1 1 0.25 dme-miR-965-3p 6mer2-7 ACGCTT X 16321984 16321989 - X_16321984_16321989_- 0.839685646 0.703171205 0.771428425 0.096530258 CG9917 FBtr0331756|FBtr0074237 16321429|16321429 16322047|16322047 X - 16321963 16322023 3'utr CG9917 FlyBase G68050.1 TATCTCGAATCCGAATCTGTAAAACGCCTTCTCAACGCTTTGACTTTGGCATTCCAAAGCG 12 16321984 0.979003954 7 11 79 0.928571429 1.113943352 0.142857143 0.166666667 0.285714286 12 1 0 13 X:16321963-16322023 6 CG9917 FBtr0331756|FBtr0074237 16321429|16321429 16322047|16322047 ACGCTT 6mer2-7 dme-miR-965-3p X - 16321962 16322001 3'utr CG9917 FlyBase G51222.1 AACGCCTTCTCAACGCTTTGACTTTGGCATTCCAAAGCGA 10 16321982 0.711417124 5 10 73 1 1.146128036 0.285714286 0.4 0.571428571 10 0 0 14 X:16321962-16322001 6 9 2634 FBgn0030740 1612.983333 110.1633333 169.58 0.005579723 0.081696874 0.053072296 -5 -7 -6 0.25 dme-miR-12-5p 7mer-m8 AATACTC X 16337819 16337825 + X_16337819_16337825_+ 0.671810317 0.657911224 0.664860771 0.009828148 Dsp1 FBtr0089259|FBtr0289960|FBtr0089263|FBtr0339766|FBtr0089261|FBtr0089262|FBtr0089260 16337806|16337806|16337806|16337806|16337806|16337806|16337806 16340443|16338771|16340624|16338884|16340443|16338771|16340443 X + 16337768 16337894 stop_codon Dsp1 FlyBase G62025.1 CGACGACGACGGCGATGGAGATGATGACGAGAACCAATAGGTTTAGCAGTAAATACTCTTCACTATTTATACACACGATCGTTGTCGCGATGGAGGAAAGAAACATGATAACGTTGGTTGATCTATT 51 16337821 0.977751035 17 46 313 0.915254237 1.431363764 0.220338983 0.137254902 0.254237288 51 4 1 54 X:16337768-16337894 7 Dsp1 FBtr0089261|FBtr0089262|FBtr0089260|FBtr0089259|FBtr0289960|FBtr0089263|FBtr0339766 16337806|16337806|16337806|16337806|16337806|16337806|16337806 16340443|16338771|16340443|16340443|16338771|16340624|16338884 AATACTC 7mer-m8 dme-miR-12-5p X + 16337765 16337894 stop_codon Dsp1 FlyBase G46837.1 CGACGACGACGACGGCGATGGAGATGATGACGAGAACCAATAGGTTTAGCAGTAAATACTCTTCACTATTTATACACACGATCGTTGTCGCGATGGAGGAAAGAAACATGATAACGTTGGTTGATCTATT 23 16337821 0.974605725 10 22 138 0.947368421 1.556302501 0.131578947 0.52173913 0.710526316 23 2 0 36 X:16337765-16337894 7 13.5 2635 FBgn0011764 2716.763333 96.47 148.13 0.004969148 0.139939878 0.091136164 -2 -2 -2 0.25 dme-miR-305-3p 6mer2-7 TGTGCC X 16337942 16337947 + X_16337942_16337947_+ 0.887586187 0.999996421 0.943791304 0.079486015 Dsp1 FBtr0089259|FBtr0289960|FBtr0089263|FBtr0339766|FBtr0089261|FBtr0089262|FBtr0089260 16337806|16337806|16337806|16337806|16337806|16337806|16337806 16340443|16338771|16340624|16338884|16340443|16338771|16340443 X + 16337935 16337973 5'utr Dsp1 FlyBase G62026.1 ATAAGGGTGTGCCCGCTTTAGAGGTTTCGCTTTCCGGTA 11 16337951 0.881112217 3 9 110 0.857142857 1.079181246 0 0.272727273 0.428571429 11 2 0 12 X:16337935-16337973 6 Dsp1 FBtr0089261|FBtr0089262|FBtr0089260|FBtr0089259|FBtr0289960|FBtr0089263|FBtr0339766 16337806|16337806|16337806|16337806|16337806|16337806|16337806 16340443|16338771|16340443|16340443|16338771|16340624|16338884 TGTGCC 6mer2-7 dme-miR-305-3p X + 16337895 16337973 5'utr Dsp1 FlyBase G46838.1 ATCAGGTTGGCCAATGTGTGTTGAATATAAATTTATATATATAAGGGTGTGCCCGCTTTAGAGGTTTCGCTTTCCGGTA 10 16337950 0.992114475 6 8 94 0.785714286 0.740362689 0.428571429 0.3 0.5 10 2 1 11 X:16337895-16337973 6 6.5 2636 FBgn0011764 2716.763333 96.47 148.13 0.002392553 0.06737846 0.043880375 -9 -8 -8.5 0.25 dme-miR-276a-3p 7mer-A1 GTTCCTA X 16338315 16338321 + X_16338315_16338321_+ 0.638692004 0.738988854 0.688840429 0.070920618 Dsp1 FBtr0089259|FBtr0289960|FBtr0089263|FBtr0339766|FBtr0089261|FBtr0089262|FBtr0089260 16337806|16337806|16337806|16337806|16337806|16337806|16337806 16340443|16338771|16340624|16338884|16340443|16338771|16340443 X + 16338295 16338326 5'utr Dsp1 FlyBase G62027.1 CGAAGAGAAGAGAAACCATTGTTCCTAGTGCA 22 16338314 0.961808214 4 22 109 1 1.397940009 0.48 0.136363636 0.24 22 0 0 25 X:16338295-16338326 7 Dsp1 FBtr0089261|FBtr0089262|FBtr0089260|FBtr0089259|FBtr0289960|FBtr0089263|FBtr0339766 16337806|16337806|16337806|16337806|16337806|16337806|16337806 16340443|16338771|16340443|16340443|16338771|16340624|16338884 GTTCCTA 7mer-A1 dme-miR-276a-3p X + 16338296 16338334 5'utr Dsp1 FlyBase G46839.1 GAAGAGAAGAGAAACCATTGTTCCTAGTGCATTTCGAAA 9 16338313 0.963563413 3 9 48 1 1.113943352 0.307692308 0.444444444 0.615384615 9 0 0 13 X:16338296-16338334 7 15.5 2637 FBgn0011764 2716.763333 96.47 148.13 0.005705318 0.160671711 0.104637818 1 2 1.5 0.25 dme-miR-2a-2-5p 7mer-A1 GATGAGA X 16339340 16339346 + X_16339340_16339346_+ 0.775127859 0.777520593 0.776324226 0.001691894 Dsp1 FBtr0089259|FBtr0089263|FBtr0089261|FBtr0089260 16337806|16337806|16337806|16337806 16340443|16340624|16340443|16340443 X + 16339190 16339521 3'utr Dsp1 FlyBase G62031.1 AGCCACGATCATAAGATACGGAAAGTTAGTCTTGGTTGGTTCGGTGCGCTTCGTGATGAGGTGGGAAGCAACCGCAACGCTGTCGTCGGACATTGCAACAATTGTTGTTGACTTGGCTGGCCATGTATATACTATTTGAAGTATTATTTAGATGAGACTACGTAGAAATTAACAAGAATCGAGAGCAAATAACGACATCATACAAGCCTAATATTAGAGTAGATTTCAGCGGGCCTGCAAAGTAATGTAAATTGCGTAGAAACCTTGAATATATTGTAGACTAGTTTTTTGAGGACTAGTATTGCCCAAAATGTTCCAGGCACAGAAACAGA 333 16339342 0.980574246 46 322 2376 0.971279373 2.57054294 0.224543081 0.138138138 0.250652742 333 11 0 372 X:16339190-16339521 7 Dsp1 FBtr0089261|FBtr0089260|FBtr0089259|FBtr0089263 16337806|16337806|16337806|16337806 16340443|16340443|16340443|16340624 GATGAGA 7mer-A1 dme-miR-2a-2-5p X + 16339276 16339442 3'utr Dsp1 FlyBase G46848.1 CGGACATTGCAACAATTGTTGTTGACTTGGCTGGCCATGTATATACTATTTGAAGTATTATTTAGATGAGACTACGTAGAAATTAACAAGAATCGAGAGCAAATAACGACATCATACAAGCCTAATATTAGAGTAGATTTCAGCGGGCCTGCAAAGTAATGTAAATT 167 16339342 0.978834893 22 159 1207 0.953846154 2.394451681 0.207692308 0.407185629 0.619230769 167 12 0 248 X:16339276-16339442 7 182.5 2638 FBgn0011764 2716.763333 96.47 148.13 0.067175524 1.891779828 1.232025923 -2 -2 -2 0.25 dme-miR-278-3p 7mer-A1 CCACCGA X 16339913 16339919 + X_16339913_16339919_+ 0.65758825 0.806145111 0.73186668 0.105045521 Dsp1 FBtr0089259|FBtr0089263|FBtr0089261|FBtr0089260 16337806|16337806|16337806|16337806 16340443|16340624|16340443|16340443 X + 16339870 16339952 3'utr Dsp1 FlyBase G62034.1 TACATATATATTTTTTAGCATGATTTTGATAGAGAATAACTCGCCACCGAGATTATATTCATAGAAGTGTGTCTAGGTTAAAC 77 16339922 0.847999238 19 75 569 0.966292135 1.33243846 0.269662921 0.142857143 0.258426966 77 0 3 86 X:16339870-16339952 7 Dsp1 FBtr0089261|FBtr0089260|FBtr0089259|FBtr0089263 16337806|16337806|16337806|16337806 16340443|16340443|16340443|16340624 CCACCGA 7mer-A1 dme-miR-278-3p X + 16339877 16339945 3'utr Dsp1 FlyBase G46851.1 ATATTTTTTAGCATGATTTTGATAGAGAATAACTCGCCACCGAGATTATATTCATAGAAGTGTGTCTAG 31 16339923 0.784384777 8 28 210 0.869565217 1.602059991 0.239130435 0.387096774 0.586956522 31 6 0 40 X:16339877-16339945 7 43 2639 FBgn0011764 2716.763333 96.47 148.13 0.015827658 0.445734425 0.29028556 -9 -10 -9.5 0.25 dme-miR-965-3p 7mer-m8 TACGCTT X 16340176 16340182 + X_16340176_16340182_+ 0.583852223 0.598162128 0.591007175 0.010118627 Dsp1 FBtr0089259|FBtr0089263|FBtr0089261|FBtr0089260 16337806|16337806|16337806|16337806 16340443|16340624|16340443|16340443 X + 16340121 16340198 3'utr Dsp1 FlyBase G62035.1 GATGATGAATGATGTGTTCTTCAAAACCATTTGTCTTAAATCTTAATTTTTGATTTACGCTTGGTACATACGTAATAG 10 16340175 0.985029416 5 10 100 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 X:16340121-16340198 7 Dsp1 FBtr0089261|FBtr0089260|FBtr0089259|FBtr0089263 16337806|16337806|16337806|16337806 16340443|16340443|16340443|16340624 TACGCTT 7mer-m8 dme-miR-965-3p X + 16340165 16340196 3'utr Dsp1 FlyBase G46855.1 AATTTTTGATTTACGCTTGGTACATACGTAAT 8 16340175 0.775072616 4 7 63 0.75 0.954242509 0 0.375 0.583333333 8 3 0 9 X:16340165-16340196 7 7.5 2640 FBgn0011764 2716.763333 96.47 148.13 0.002760638 0.077744376 0.050631202 1 1 1 0.25 dme-miR-79-3p 7mer-m8 TAGCTTT X 16340244 16340250 + X_16340244_16340250_+ 0.598534707 0.607326318 0.602930512 0.0062166 Dsp1 FBtr0089259|FBtr0089263|FBtr0089261|FBtr0089260 16337806|16337806|16337806|16337806 16340443|16340624|16340443|16340443 X + 16340212 16340273 3'utr Dsp1 FlyBase G62036.1 ATGTTGTTACAAATCCCAATAATGAACAGCTTTAGCTTTTATATTTGATAGACAACAACACT 35 16340243 0.982887649 6 32 332 0.921052632 1.544068044 0.105263158 0.085714286 0.157894737 35 3 0 35 X:16340212-16340273 7 Dsp1 FBtr0089261|FBtr0089260|FBtr0089259|FBtr0089263 16337806|16337806|16337806|16337806 16340443|16340443|16340443|16340624 TAGCTTT 7mer-m8 dme-miR-79-3p X + 16340212 16340265 3'utr Dsp1 FlyBase G46856.1 ATGTTGTTACAAATCCCAATAATGAACAGCTTTAGCTTTTATATTTGATAGACA 19 16340243 0.758336317 5 18 174 0.964285714 1.431363764 0 0.368421053 0.571428571 19 1 0 27 X:16340212-16340265 7 25 2641 FBgn0011764 2716.763333 96.47 148.13 0.009202127 0.259147922 0.168770674 1 1 1 0.25 dme-bantam-3p 6mer2-7 GATCTC X 16378849 16378854 + X_16378849_16378854_+ 0.992468284 0.989457019 0.990962651 0.002129311 Fur2 FBtr0301300 16377374 16381545 X + 16378762 16378892 3'utr Fur2 FlyBase G62085.1 TGGCCCTGTCACGACACCTGCGAAACGTGCGCCGGTGCCGGACCCGACAGCTGCCTCACATGTGCTCCGGCCCACCTGCACGTCATCGATCTCGCCGTCTGCCTGCAATTCTGCCCGGACGGATATTTTGA 110 16378847 0.970546132 15 105 603 0.959349593 2.071882007 0.284552846 0.109090909 0.203252033 110 5 0 118 X:16378762-16378892 6 Fur2 FBtr0301300 16377374 16381545 GATCTC 6mer2-7 dme-bantam-3p X + 16378809 16378891 3'utr Fur2 FlyBase G46888.1 CAGCTGCCTCACATGTGCTCCGGCCCACCTGCACGTCATCGATCTCGCCGTCTGCCTGCAATTCTGCCCGGACGGATATTTTG 56 16378846 0.943741831 12 53 310 0.946808511 1.949390007 0.393617021 0.392857143 0.638297872 56 5 0 89 X:16378809-16378891 6 64.5 2642 FBgn0004598 1868.423333 38.93666667 59.46333333 0.034521085 1.656536255 1.084702057 2 3 2.5 0.25 dme-miR-1008-3p 8mer-A1 AGCTGTGA X 16379038 16379045 + X_16379038_16379045_+ 0.585591055 0.508198853 0.546894954 0.054724549 Fur2 FBtr0301300 16377374 16381545 X + 16378985 16379052 3'utr Fur2 FlyBase G62086.1 TTCCCTGCGAGCCCAACTGTGCCTCATGCCAGGACCATCCCGAGTACTGCACTAGCTGTGATCACCAT 15 16379037 0.966416038 7 13 70 0.933333333 0.84509804 0 0 0 15 0 1 14 X:16378985-16379052 8 Fur2 FBtr0301300 16377374 16381545 AGCTGTGA 8mer-A1 dme-miR-1008-3p X + 16379021 16379058 3'utr Fur2 FlyBase G46889.1 ATCCCGAGTACTGCACTAGCTGTGATCACCATTTGGTT 14 16379037 0.781898946 6 14 90 1 1.301029996 0.1 0.428571429 0.6 14 0 0 20 X:16379021-16379058 8 12.5 2643 FBgn0004598 1868.423333 38.93666667 59.46333333 0.006690133 0.321034158 0.210213577 1 1 1 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA X 16388000 16388007 + X_16388000_16388007_+ 0.497873416 0.500117167 0.498995292 0.001586606 CG4239 FBtr0340314|FBtr0074268|FBtr0074270|FBtr0074269 16387959|16387959|16387959|16387959 16388702|16388702|16388702|16388702 X + 16387950 16388035 stop_codon CG4239 FlyBase G62102.1 AGAGCAACTAAAACTATTTGTAGTCAGCCCCATCTTCCCCCGGACAAATAGTACTTAACGCTGCCAGCCAAAGCTAACGCCTAAAA 39 16387998 0.958284295 8 35 168 0.925 1.568201724 0.15 0.025641026 0.05 39 3 0 37 X:16387950-16388035 8 CG4239 FBtr0074270|FBtr0074269|FBtr0340314|FBtr0074268 16387959|16387959|16387959|16387959 16388702|16388702|16388702|16388702 GTACTTAA 8mer-A1 dme-miR-252-5p X + 16387972 16388024 3'utr CG4239 FlyBase G46901.1 GTCAGCCCCATCTTCCCCCGGACAAATAGTACTTAACGCTGCCAGCCAAAGCT 17 16387998 0.932983327 6 15 66 0.875 1.322219295 0.166666667 0.294117647 0.5 17 3 0 21 X:16387972-16388024 8 20.5 2644 FBgn0030745 456.7933333 30.29666667 46.16666667 0.044878063 0.676642095 0.444043321 2 2 2 0.25 dme-miR-14-3p 7mer-m8 AAGACTG X 16436783 16436789 + X_16436783_16436789_+ 0.630290706 0.363557111 0.496923909 0.188609137 hang FBtr0074276 16436732 16438454 X + 16436767 16436798 3'utr hang FlyBase G62140.1 CAGCAAGACAAGCAGTAAGACTGTGGCAGCAG 20 16436782 0.843587723 2 18 42 0.863636364 1.278753601 0.545454545 0.1 0.181818182 20 3 0 19 X:16436767-16436798 7 hang FBtr0074276 16436732 16438454 AAGACTG 7mer-m8 dme-miR-14-3p X + 16436758 16436798 3'utr hang FlyBase G46929.1 CAATAATAACAGCAAGACAAGCAGTAAGACTGTGGCAGCAG 16 16436790 0.852672449 3 14 33 0.894736842 1.230448921 0.473684211 0.1875 0.315789474 16 2 0 17 X:16436758-16436798 7 17.5 2645 FBgn0026575 3688.81 55.80333333 85.77333333 0.004744077 0.313601338 0.204026115 1 -7 -3 0.25 dme-miR-33-5p 8mer-A1 CAATGCAA X 16436888 16436895 + X_16436888_16436895_+ 0.53861924 0.510674528 0.524646884 0.019759887 hang FBtr0343571|FBtr0290069|FBtr0074276 16436811|16436811|16436732 16438454|16438454|16438454 X + 16436808 16436927 stop_codon hang FlyBase G62141.1 ATTGAGTGATCATACTCCAACTACAACTCCAACTACCACTACCACTACCAACCACAACTACCAACCACACCTCATCATCTCAATGCAAAATCACTTGAAATGTACAAAGCCAATCCAATC 48 16436908 0.949845876 13 47 206 0.983050847 1.763427994 0.033898305 0.208333333 0.355932203 48 1 0 58 X:16436808-16436927 8 hang FBtr0343571|FBtr0290069|FBtr0074276 16436811|16436811|16436732 16438454|16438454|16438454 CAATGCAA 8mer-A1 dme-miR-33-5p X + 16436801 16436926 stop_codon hang FlyBase G46930.1 GCGACAAATTGAGTGATCATACTCCAACTACAACTCCAACTACCACTACCACTACCAACCACAACTACCAACCACACCTCATCATCTCAATGCAAAATCACTTGAAATGTACAAAGCCAATCCAAT 23 16436908 0.810966884 10 22 96 0.970588235 1.217483944 0 0.347826087 0.558823529 23 0 1 33 X:16436801-16436926 8 14 2646 FBgn0026575 3688.81 55.80333333 85.77333333 0.003795262 0.25088107 0.163220892 -20 -20 -20 0.25 dme-miR-1012-3p 6mer2-7 TGACTA X 16445250 16445255 + X_16445250_16445255_+ 0.998537488 0.963719315 0.981128402 0.024620185 rngo FBtr0343349 16444757 16445367 X + 16445212 16445268 3'utr rngo FlyBase G62161.1 TGAAACAAGTAAATACAAAAGAAAAACGAAAGAATGCCTGACTATTAAATAATATTA 13 16445255 0.903037769 5 12 57 0.933333333 1.146128036 0.066666667 0.153846154 0.266666667 13 1 0 14 X:16445212-16445268 6 rngo FBtr0343349 16444757 16445367 TGACTA 6mer2-7 dme-miR-1012-3p X + 16445238 16445268 3'utr rngo FlyBase G46943.1 CGAAAGAATGCCTGACTATTAAATAATATTA 9 16445256 0.762802238 3 6 53 0.769230769 1 0 0.333333333 0.538461538 9 3 0 10 X:16445238-16445268 6 10 2647 FBgn0030753 1218.62 66.64333333 101.9733333 0.008206004 0.150052518 0.098064854 -5 -6 -5.5 0.25 dme-miR-283-5p 8mer-m1 TGATATTT X 16452125 16452132 + X_16452125_16452132_+ 0.391093691 0.536910382 0.464002037 0.103107977 Rbp2 FBtr0343633|FBtr0074280|FBtr0343632|FBtr0074281|FBtr0074279 16452084|16452084|16452084|16452084|16452084 16453615|16454972|16453615|16453615|16454972 X + 16452096 16452172 3'utr Rbp2 FlyBase G62168.1 TTGGTCCGCAATACAATATATGCCTGATATGATATTTTGATGTGCGAGAACGAGATAATCCGAGATAGAGGGAGAGA 41 16452152 0.870226809 13 36 258 0.882352941 1.653212514 0.509803922 0.146341463 0.31372549 41 6 0 45 X:16452096-16452172 8 Rbp2 FBtr0074279|FBtr0343633|FBtr0074280|FBtr0343632|FBtr0074281 16452084|16452084|16452084|16452084|16452084 16454972|16453615|16454972|16453615|16453615 TGATATTT 8mer-m1 dme-miR-283-5p X + 16452105 16452171 3'utr Rbp2 FlyBase G46949.1 AATACAATATATGCCTGATATGATATTTTGATGTGCGAGAACGAGATAATCCGAGATAGAGGGAGAG 20 16452114 0.818703012 7 16 129 0.806451613 0.920818754 0.709677419 0.45 0.64516129 20 4 2 25 X:16452105-16452171 8 17.5 2648 FBgn0262734 5061.32 184.5666667 285.3533333 0.003457596 0.094816688 0.061327477 -27 11 -8 0.25 dme-bantam-3p 7mer-A1 GATCTCA X 1649339 1649345 + X_1649339_1649345_+ 0.800532205 0.801151657 0.800841931 0.000438053 br FBtr0070261|FBtr0330406|FBtr0300427|FBtr0300428|FBtr0332293|FBtr0070263 1648712|1649105|1648712|1648712|1648712|1648712 1649378|1649378|1649378|1649378|1649378|1649378 X + 1649280 1649357 3'utr br FlyBase G58005.1 GAAAAAGGAGCAGAGGGAGATTAGGACTATACTACTACCACGTAGACATTTCAATTTCGGATCTCACAGAACGGAAAA 40 1649335 0.974229974 7 39 240 1 1.653212514 0.4 0.125 0.222222222 40 0 0 45 X:1649280-1649357 7 br FBtr0300427|FBtr0070261|FBtr0330406|FBtr0070263|FBtr0300428|FBtr0332293 1648712|1648712|1649105|1648712|1648712|1648712 1649378|1649378|1649378|1649378|1649378|1649378 GATCTCA 7mer-A1 dme-bantam-3p X + 1649282 1649362 3'utr br FlyBase G43884.1 AAAAGGAGCAGAGGGAGATTAGGACTATACTACTACCACGTAGACATTTCAATTTCGGATCTCACAGAACGGAAAATTCAA 33 1649335 0.982257346 8 29 214 0.895833333 1.633468456 0.3125 0.333333333 0.541666667 33 5 0 43 X:1649282-1649362 7 25.5 2649 FBgn0000210 1688.696667 27.97 43.00333333 0.015100403 0.911691098 0.592977289 4 4 4 0.25 dme-bantam-3p 8mer-A1 TGATCTCA X 16543637 16543644 - X_16543637_16543644_- 0.569709518 0.576364889 0.573037203 0.004706078 CG9902 FBtr0074296|FBtr0334035 16543568|16542122 16543682|16543682 X - 16543620 16543672 3'utr CG9902 FlyBase G68143.1 AGTCCCCAGGAGATGTCATAGAAACTAGTGATCTCAAACAGGTCCCCCTAAAT 145 16543644 0.73443773 7 141 637 0.98245614 2.225309282 0.087719298 0.166666667 0.298245614 144 3 0 168 X:16543620-16543672 8 CG9902 FBtr0334035 16542122 16543682 TGATCTCA 8mer-A1 dme-bantam-3p X - 16543581 16543771 stop_codon CG9902 FlyBase G51293.1 TGATCCATGACGCCCTAAAAACTACAAACGTGCCACAGAAGACTCTGGACTTACAGTTCTTGTCCAAGAAGCACATAAGAACTGGATAACAGACCCAGGAGTCCCCAGGAGATGTCATAGAAACTAGTGATCTCAAACAGGTCCCCCTAAATAGCCTGTTCAAAGTAGAGGGACTGGATGCAAGACAGGCG 112 16543644 0.956704622 14 106 480 0.950310559 1.883661435 0.093167702 0.383928571 0.571428571 112 7 1 153 X:16543581-16543771 8 115.5 2650 FBgn0030757 334.18 9.023333333 13.79333333 0.34562212 12.80014777 8.37361044 0 0 0 0.25 dme-miR-995-5p 6mer3-8 AATTCG X 16595302 16595307 + X_16595302_16595307_+ 0.503483712 0.527935678 0.515709695 0.017290175 Ubc7 FBtr0074283|FBtr0340157 16594808|16594808 16595416|16595867 X + 16595286 16595323 3'utr Ubc7 FlyBase G62184.1 TAGTCATTACACACTTAATTCGACTGATCATTAACTGA 14 16595304 0.70042807 6 14 102 1 1.230448921 0 0.142857143 0.294117647 14 0 0 17 X:16595286-16595323 6 Ubc7 FBtr0074283|FBtr0340157 16594808|16594808 16595416|16595867 AATTCG 6mer3-8 dme-miR-995-5p X + 16595293 16595324 3'utr Ubc7 FlyBase G46962.2 TACACACTTAATTCGACTGATCATTAACTGAA 8 16595304 0.72110378 4 7 47 0.928571429 1.113943352 0 0.375 0.642857143 8 1 0 13 X:16595293-16595324 6 10 2651 FBgn0267384 316.29 26.46 40.41666667 0.031616554 0.377928949 0.24742268 -2 -2 -2 0.25 dme-miR-317-5p 6mer2-7 TATCCC X 1659883 1659888 + X_1659883_1659888_+ 0.64263319 0.91249584 0.777564515 0.190821674 br FBtr0070265|FBtr0303562 1659601|1654641 1664869|1664869 X + 1659844 1659888 3'utr br FlyBase G58011.1 ATATTAGGCATATTTTGGCGTCAACTGTTTTATTACTCTTATCCC 15 1659876 0.850632795 5 12 156 0.866666667 1.113943352 0 0 0 15 2 0 13 X:1659844-1659888 6 br FBtr0070265|FBtr0303562 1659601|1654641 1664869|1664869 TATCCC 6mer2-7 dme-miR-317-5p X + 1659850 1659883 3'utr br FlyBase G43888.1 GGCATATTTTGGCGTCAACTGTTTTATTACTCTT 9 1659876 0.91975619 4 7 80 0.818181818 0.954242509 0.090909091 0.222222222 0.363636364 9 2 0 9 X:1659850-1659883 1 5 2652 FBgn0000210 1688.696667 27.97 43.00333333 0.002960863 0.17876296 0.116270057 7 7 7 0.25 dme-miR-980-3p 6mer3-8 GGCAGC X 16609165 16609170 + X_16609165_16609170_+ 0.943631395 0.994876376 0.969253886 0.036235687 Nup153 FBtr0074284|FBtr0340158|FBtr0299587 16609097|16609097|16609097 16610459|16610459|16610459 X + 16609106 16609184 3'utr Nup153 FlyBase G62212.1 ATCGCAGTCGGCCATCACGATAGCAAATGAGGCCGCCGTCGGATTAGGATTAAGATATTGGCAGCCATTGCCGAGAGTA 15 16609164 0.994684754 6 14 66 1 1.146128036 0.142857143 0 0 14 0 0 14 X:16609106-16609184 6 Nup153 FBtr0299587|FBtr0074284|FBtr0340158 16609097|16609097|16609097 16610459|16610459|16610459 GGCAGC 6mer3-8 dme-miR-980-3p X + 16609127 16609181 3'utr Nup153 FlyBase G46977.1 AGCAAATGAGGCCGCCGTCGGATTAGGATTAAGATATTGGCAGCCATTGCCGAGA 6 16609164 0.948960344 3 5 25 1 0.84509804 0.285714286 0.166666667 0.285714286 6 0 0 7 X:16609127-16609181 6 5.5 2653 FBgn0061200 3129.656667 47.90333333 73.78666667 0.001757381 0.114814557 0.074539212 1 1 1 0.25 dme-miR-2a-2-5p 6mer3-8 TGATGA X 16609733 16609738 + X_16609733_16609738_+ 0.677522261 0.644423958 0.660973109 0.023404032 Nup153 FBtr0074284|FBtr0340158|FBtr0299587 16609097|16609097|16609097 16610459|16610459|16610459 X + 16609719 16609754 3'utr Nup153 FlyBase G62214.1 CATACTACGCATATTGATGATTACAAATTATAAAAA 8 16609733 0.670631461 4 8 54 1 0.954242509 0 0.125 0.222222222 8 0 0 9 X:16609719-16609754 6 Nup153 FBtr0299587|FBtr0074284|FBtr0340158 16609097|16609097|16609097 16610459|16610459|16610459 TGATGA 6mer3-8 dme-miR-2a-2-5p X + 16609722 16609751 3'utr Nup153 FlyBase G46978.1 ACTACGCATATTGATGATTACAAATTATAA 5 16609733 0.638750851 4 5 35 1 0.954242509 0 0.6 0.777777778 5 0 0 9 X:16609722-16609751 6 6.5 2654 FBgn0061200 3129.656667 47.90333333 73.78666667 0.002076905 0.135689931 0.088091796 0 0 0 0.25 dme-miR-980-3p 7mer-m8 GGCAGCT X 16614135 16614141 + X_16614135_16614141_+ 0.658757808 0.658692945 0.658725376 4.59E-05 mbt FBtr0074285 16614013 16614856 X + 16613967 16614180 stop_codon mbt FlyBase G62229.1 CCGTCGCTGCTGGTTCCGCTGATGCGCAATGCGCGACACCATCCGTAGTTGGATGCCACTGGACAACCCAGACGATCCGGCTGCTCGATGAAAGCAATCATTCCCACAGACAACGGATCCCGGCCCGTGGGCATCCATCTATTAAATTCTAGTATTAACATTCAGTTTGGCAGCTGTACTTAAATCCCCGGAGAATCCTCGAAACGTTGTAAAG 633 16614133 0.953262788 26 615 5004 0.970914127 2.146748014 0.159279778 0.129541864 0.236842105 633 17 4 701 X:16613967-16614180 7 mbt FBtr0074285 16614013 16614856 GGCAGCT 7mer-m8 dme-miR-980-3p X + 16614110 16614168 3'utr mbt FlyBase G46987.1 AAATTCTAGTATTAACATTCAGTTTGGCAGCTGTACTTAAATCCCCGGAGAATCCTCGA 455 16614133 0.737649622 10 444 3565 0.979885057 2.231724383 0.139367816 0.384615385 0.597701149 455 11 3 682 X:16614110-16614168 7 529 2655 FBgn0025743 524.9733333 19.44666667 29.74666667 1.007670231 27.20260542 17.78350515 2 2 2 0.25 dme-miR-277-3p 7mer-A1 GCATTTA X 16614318 16614324 + X_16614318_16614324_+ 0.822818613 0.584596369 0.703707491 0.168448533 mbt FBtr0074285 16614013 16614856 X + 16614299 16614334 3'utr mbt FlyBase G62231.1 CGGATGGAGAAACGATATAGCATTTATCTGCCCGAG 7 16614316 0.684407251 4 7 41 1 1.079181246 0.25 0.571428571 0.75 7 0 0 12 X:16614299-16614334 7 mbt FBtr0074285 16614013 16614856 GCATTTA 7mer-A1 dme-miR-277-3p X + 16614283 16614338 3'utr mbt FlyBase G46988.1 CATCCTGCAACCGATACGGATGGAGAAACGATATAGCATTTATCTGCCCGAGAACC 6 16614326 0.965924525 4 5 27 0.714285714 0.698970004 0.285714286 0.166666667 0.285714286 6 2 0 5 X:16614283-16614338 7 5.5 2656 FBgn0025743 524.9733333 19.44666667 29.74666667 0.010476723 0.28282482 0.184894666 2 -8 -3 0.25 dme-miR-2a-2-5p 6mer3-8 TGATGA X 16624331 16624336 - X_16624331_16624336_- 0.983432718 0.96030788 0.971870299 0.016351703 Rok FBtr0074286|FBtr0340151 16624209|16624209 16626162|16626162 X - 16624297 16624346 3'utr Rok FlyBase G68217.1 ACTATTATTATGATGATCATTCGTATTACGTTTATGTTTAATTGTACTCT 12 16624336 0.990467617 5 11 125 1 1.176091259 0 0.166666667 0.333333333 12 0 0 15 X:16624297-16624346 6 Rok FBtr0074286|FBtr0340151 16624209|16624209 16626162|16626162 TGATGA 6mer3-8 dme-miR-2a-2-5p X - 16624319 16624346 3'utr Rok FlyBase G51339.1 ACTATTATTATGATGATCATTCGTATTA 11 16624336 0.752953059 2 10 104 0.9375 1.176091259 0 0.272727273 0.5 11 1 0 15 X:16624319-16624346 6 10.5 2657 FBgn0026181 1648.443333 28.48333333 43.82 0.006369646 0.36863663 0.239616613 0 0 0 0.25 dme-miR-8-3p 8mer-A1 CAGTATTA X 1674224 1674231 - X_1674224_1674231_- 0.669299816 0.669742615 0.669521215 0.000313107 CG32809 FBtr0308321|FBtr0333117|FBtr0333120|FBtr0333118|FBtr0308323|FBtr0333119|FBtr0308324 1673336|1673108|1673336|1673336|1673336|1673336|1673336 1675880|1675880|1675880|1677054|1675880|1675880|1677238 X - 1674202 1674267 3'utr CG32809 FlyBase G64043.1 ATTTGTTAACCTTACTGCCCGGCCAGTATTAGACTTCAGTATTATAGGCTAATTTACATTTAAATA 41 1674232 0.884651353 10 37 364 0.93877551 1.662757832 0.142857143 0.146341463 0.285714286 41 3 0 46 X:1674202-1674267 8 CG32809 FBtr0333120|FBtr0333117|FBtr0308321|FBtr0308324|FBtr0333119|FBtr0308323|FBtr0333118 1673336|1673108|1673336|1673336|1673336|1673336|1673336 1675880|1675880|1675880|1677238|1675880|1675880|1677054 CAGTATTA 8mer-A1 dme-miR-8-3p X - 1674179 1674282 3'utr CG32809 FlyBase G48272.1 CGTGCACACACATAGATTTGTTAACCTTACTGCCCGGCCAGTATTAGACTTCAGTATTATAGGCTAATTTACATTTAAATAAACTTGTAACACACGACTTGAGA 28 1674232 0.990554333 13 23 235 0.863636364 1.278753601 0.25 0.392857143 0.613636364 28 5 1 38 X:1674179-1674282 8 25 2658 FBgn0023531 281.8933333 6.233333333 9.576666667 0.088686028 4.010695187 2.61051166 1 1 1 0.25 dme-miR-282-5p 8mer-A1 AGAGGCTA X 16785427 16785434 - X_16785427_16785434_- 0.600325681 0.525168662 0.562747172 0.053144024 CG9609 FBtr0074356 16785113 16785478 X - 16785376 16785460 3'utr CG9609 FlyBase G68258.1 GGGACGGGAGTGAGAAGGTCTGGTCAAGAGGCTAACAATTGAATGACTACTTTAATTTAAACCACAACTTCTAAAAGAGAAACAA 28 16785438 0.967379161 10 26 140 0.933333333 1.447158031 0.366666667 0.035714286 0.1 28 2 0 28 X:16785376-16785460 8 CG9609 FBtr0074356 16785113 16785478 AGAGGCTA 8mer-A1 dme-miR-282-5p X - 16785390 16785456 3'utr CG9609 FlyBase G51372.1 CGGGAGTGAGAAGGTCTGGTCAAGAGGCTAACAATTGAATGACTACTTTAATTTAAACCACAACTTC 18 16785439 0.959681276 7 16 87 0.92 1.361727836 0.6 0.222222222 0.44 18 2 0 23 X:16785390-16785456 8 17.5 2659 FBgn0030787 206.1233333 13.74333333 21.09 0.084900626 1.273344652 0.829777146 4 5 4.5 0.25 dme-miR-14-3p 7mer-A1 AGACTGA X 16789595 16789601 + X_16789595_16789601_+ 0.79783233 0.804568197 0.801200264 0.004763001 Sap30 FBtr0074331|FBtr0344089 16788694|16788694 16789644|16789644 X + 16789562 16789616 3'utr Sap30 FlyBase G62279.1 GAATTACGCATTAAACGATTTATGTTAAAGCCTAGACTGATTTTAGCCATACATA 29 16789603 0.979262646 8 29 200 1 1.544068044 0.2 0.172413793 0.314285714 29 0 0 35 X:16789562-16789616 7 Sap30 FBtr0344089|FBtr0074331 16788694|16788694 16789644|16789644 AGACTGA 7mer-A1 dme-miR-14-3p X + 16789550 16789617 3'utr Sap30 FlyBase G47024.1 ACAAATCAATTGGAATTACGCATTAAACGATTTATGTTAAAGCCTAGACTGATTTTAGCCATACATAT 22 16789602 0.9864013 6 18 148 0.8125 0.937852093 0.09375 0.318181818 0.53125 22 4 2 26 X:16789550-16789617 7 24.5 2660 FBgn0030788 191.5866667 13.93666667 21.27333333 0.127879463 1.757952643 1.15167659 -8 -7 -7.5 0.25 dme-miR-1008-3p 7mer-m8 AGCTGTG X 16795949 16795955 + X_16795949_16795955_+ 0.663918178 0.621665007 0.642791592 0.029877524 CG4768 FBtr0074332|FBtr0347029|FBtr0305899 16795317|16795317|16795317 16796023|16797742|16796756 X + 16795923 16795970 3'utr CG4768 FlyBase G62290.1 TTTTGCATTATGCAAACGACAAATGAAGCTGTGTAAATAACAACAAAA 48 16795946 0.875741007 4 44 204 0.945454545 1.238882089 0 0.125 0.236363636 48 1 2 52 X:16795923-16795970 7 CG4768 FBtr0305899|FBtr0074332|FBtr0347029 16795317|16795317|16795317 16796756|16796023|16797742 AGCTGTG 7mer-m8 dme-miR-1008-3p X + 16795923 16795970 3'utr CG4768 FlyBase G47031.1 TTTTGCATTATGCAAACGACAAATGAAGCTGTGTAAATAACAACAAAA 31 16795946 0.909399037 4 29 134 0.968253968 1.484299839 0.015873016 0.548387097 0.777777778 31 1 1 61 X:16795923-16795970 7 38 2661 FBgn0030790 591.9266667 27.66333333 42.73 0.064197142 1.373659477 0.889304938 3 3 3 0.25 dme-miR-276a-3p 6mer2-7 GTTCCT X 16798613 16798618 - X_16798613_16798618_- 0.799688181 0.998990742 0.899339462 0.140928149 CG9132 FBtr0074353|FBtr0074354|FBtr0306801 16796900|16797514|16797514 16798632|16798632|16798632 X - 16798560 16798628 3'utr CG9132 FlyBase G68273.1 ACATCATCCTGTTCCTCCTGCTGCTGCTGCTGCTGCGCTCCTATCACCCAGAACTTTATGTTTTAAGAC 19 16798619 0.765540447 8 17 152 0.888888889 0.903089987 0.074074074 0.315789474 0.518518519 19 1 2 24 X:16798560-16798628 6 CG9132 FBtr0306801|FBtr0074353|FBtr0074354 16797514|16796900|16797514 16798632|16798632|16798632 GTTCCT 6mer2-7 dme-miR-276a-3p X - 16798583 16798635 stop_codon CG9132 FlyBase G51379.1 TAGATATACATCATCCTGTTCCTCCTGCTGCTGCTGCTGCTGCGCTCCTATCA 7 16798621 0.91438085 5 6 48 0.777777778 0.84509804 0.222222222 0.285714286 0.444444444 7 2 0 7 X:16798583-16798635 6 8 2662 FBgn0030791 552.37 33.83666667 51.63333333 0.014483046 0.236429908 0.15493867 1 3 2 0.25 dme-miR-304-5p 8mer-A1 TGAGATTA X 16826266 16826273 + X_16826266_16826273_+ 0.545692148 0.473618382 0.509655265 0.050963802 CG4829 FBtr0335278|FBtr0112994|FBtr0074336|FBtr0112995|FBtr0074338|FBtr0074337 16826137|16826137|16826137|16826137|16826137|16826137 16826494|16826494|16826494|16826494|16826494|16826494 X + 16826242 16826291 3'utr CG4829 FlyBase G62306.1 CACACACGCACGGAAACATTGCATTGAGATTAGAGTAGAACTGCCCGAAA 27 16826265 0.971224266 5 27 157 1 1.431363764 0.444444444 0 0 27 0 0 27 X:16826242-16826291 8 CG4829 FBtr0074338|FBtr0074337|FBtr0074336|FBtr0112995|FBtr0335278|FBtr0112994 16826137|16826137|16826137|16826137|16826137|16826137 16826494|16826494|16826494|16826494|16826494|16826494 TGAGATTA 8mer-A1 dme-miR-304-5p X + 16826241 16826285 3'utr CG4829 FlyBase G47043.1 ACACACACGCACGGAAACATTGCATTGAGATTAGAGTAGAACTGC 21 16826265 0.968202391 4 21 117 1 1.579783597 0.394736842 0.571428571 0.763157895 21 0 0 38 X:16826241-16826285 8 24 2663 FBgn0030796 2560.61 104.38 159.97 0.009372767 0.229929105 0.15002813 1 1 1 0.25 dme-miR-304-5p 6mer2-7 GAGATT X 16827323 16827328 - X_16827323_16827328_- 0.877470489 0.885508804 0.881489646 0.005683936 CG13004 FBtr0112996|FBtr0308682|FBtr0074351 16826679|16826679|16826679 16827398|16827398|16827398 X - 16827252 16827391 3'utr CG13004 FlyBase G68283.1 GTGGTGGCGAGGGAGGGAGTTGAATGGAACTAATGGAGCAGTAGATGGAGGAGAGAGAATTAAGAGATTTTTTCCCAACTGGCAGCGCAACGGATTTCTGTACTTGACCCACTTAAAATAACCATATGCAAAAAAAACTG 633 16827321 0.983165853 23 560 4273 0.882014388 1.833217965 0.381294964 0.088467615 0.169784173 633 74 8 613 X:16827252-16827391 6 CG13004 FBtr0112996|FBtr0074351|FBtr0308682|FBtr0304152 16826679|16826679|16826679|16827115 16827398|16827398|16827398|16827398 GAGATT 6mer2-7 dme-miR-304-5p X - 16827224 16827389 3'utr CG13004 FlyBase G51388.1 GGTGGCGAGGGAGGGAGTTGAATGGAACTAATGGAGCAGTAGATGGAGGAGAGAGAATTAAGAGATTTTTTCCCAACTGGCAGCGCAACGGATTTCTGTACTTGACCCACTTAAAATAACCATATGCAAAAAAAACTGTAACAACGACATCGATAAGTGGTGTTCT 394 16827321 0.980725651 21 350 2543 0.881602914 1.906694111 0.43715847 0.314720812 0.508196721 394 60 5 484 X:16827224-16827389 6 394.5 2664 FBgn0030797 333.0633333 17.96666667 27.55 1.184459412 21.95732839 14.31941924 -7 -7 -7 0.25 dme-miR-999-3p 8mer-A1 AGTTAACA X 16885831 16885838 + X_16885831_16885838_+ 0.450570302 0.540703133 0.495636718 0.063733514 Rcp FBtr0074341 16885515 16885859 X + 16885804 16885846 3'utr Rcp FlyBase G62309.1 GGAACAGACAGGGAATGTATTATGCTTAGTTAACAATAAAGCT 11 16885823 0.98298179 2 11 86 1 1.041392685 0 0 0 11 0 0 11 X:16885804-16885846 8 Rcp FBtr0074341 16885515 16885859 AGTTAACA 8mer-A1 dme-miR-999-3p X + 16885802 16885839 3'utr Rcp FlyBase G47046.1 CTGGAACAGACAGGGAATGTATTATGCTTAGTTAACAA 6 16885823 0.983245378 3 6 46 1 1.079181246 0 0.833333333 0.916666667 6 0 0 12 X:16885802-16885839 8 7.5 2665 FBgn0030801 124.5266667 14.28333333 21.93 0.060228064 0.525087515 0.341997264 8 8 8 0.25 dme-miR-317-3p 6mer3-8 TGTGTT X 16937154 16937159 + X_16937154_16937159_+ 0.990804715 0.996966359 0.993885537 0.00435698 CG4928 FBtr0074345|FBtr0074344 16936676|16936676 16938209|16937411 X + 16937144 16937178 5'utr CG4928 FlyBase G62329.1 AAATCCTTTGTGTGTTAGTCTAGGTGTAAGCACAC 5 16937157 0.720739342 3 4 41 1 0.84509804 0.285714286 0.2 0.428571429 5 0 0 7 X:16937144-16937178 6 CG4928 FBtr0074345|FBtr0074344 16936676|16936676 16938209|16937411 TGTGTT 6mer3-8 dme-miR-317-3p X + 16937141 16937171 5'utr CG4928 FlyBase G47056.1 TGCAAATCCTTTGTGTGTTAGTCTAGGTGTA 5 16937156 0.630679204 4 4 42 0.833333333 0.698970004 0.833333333 0.2 0.333333333 5 1 0 5 X:16937141-16937171 6 4 2666 FBgn0027556 126.41 4.513333333 6.916666667 0.031643066 0.886262925 0.578313253 -3 -2 -2.5 0.25 dme-miR-1003-3p 7mer-A1 TGTGAGA X 16938168 16938174 + X_16938168_16938174_+ 0.639579825 0.61213309 0.625856458 0.019407748 CG4928 FBtr0074345 16936676 16938209 X + 16938138 16938185 3'utr CG4928 FlyBase G62332.1 AATGGAAAAAATACACGCACATAACAAATTTGTGAGAAAAAAAATTAC 13 16938167 0.948106588 4 12 48 0.9375 1.176091259 0 0.230769231 0.375 13 1 0 15 X:16938138-16938185 7 CG4928 FBtr0074345 16936676 16938209 TGTGAGA 7mer-A1 dme-miR-1003-3p X + 16938152 16938183 3'utr CG4928 FlyBase G47058.1 ACGCACATAACAAATTTGTGAGAAAAAAAATT 12 16938166 0.919781942 2 12 49 1 1.278753601 0 0.333333333 0.578947368 12 0 0 19 X:16938152-16938183 7 11.5 2667 FBgn0027556 126.41 4.513333333 6.916666667 0.090973815 2.548005908 1.662650602 1 2 1.5 0.25 dme-miR-14-3p 7mer-m8 AAGACTG X 16938531 16938537 - X_16938531_16938537_- 0.668861064 0.644384505 0.656622785 0.01730757 wus FBtr0074418|FBtr0342974 16938494|16938242 16938752|16938752 X - 16938506 16938593 3'utr wus FlyBase G68308.1 TAGCTGTATCTGTTTCCACATGTATTTATTACCATAAATCTGCGTTGTTTATTGTCAAGACTGTGTTTAAAAATATTAAAGCACCCCA 7 16938555 0.986654004 5 7 73 1 1 0.1 0.285714286 0.5 7 0 0 10 X:16938506-16938593 7 wus FBtr0074418|FBtr0342974 16938494|16938242 16938752|16938752 AAGACTG 7mer-m8 dme-miR-14-3p X - 16938523 16938555 3'utr wus FlyBase G51402.1 TCTGCGTTGTTTATTGTCAAGACTGTGTTTAAA 5 16938530 0.805695826 2 5 48 1 0.698970004 0.2 0 0 5 0 0 5 X:16938523-16938555 7 4 2668 FBgn0030805 139 7.906666667 12.04333333 0.028776978 0.505902192 0.332133961 18 -7 5.5 0.25 dme-miR-277-3p 7mer-m8 TGCATTT X 16955511 16955517 + X_16955511_16955517_+ 0.619960439 0.619314855 0.619637647 0.000456437 RhoGAP15B FBtr0110990|FBtr0290096 16955463|16955463 16955995|16956234 X + 16955459 16955572 stop_codon RhoGAP15B FlyBase G62359.1 AAGTAGAAGTGCCCTCTCCCAGCTGCCAAACATAGATTTAACCGCCGTCTTGTGCATTTTTCTGTAGATATTCTGAATTTATTCGCAATATTAGGGAATATATACGTTTAGCAA 51 16955508 0.901497505 19 49 495 0.952380952 1.77815125 0.238095238 0.176470588 0.333333333 51 3 0 60 X:16955459-16955572 7 RhoGAP15B FBtr0290096|FBtr0110990 16955463|16955463 16956234|16955995 TGCATTT 7mer-m8 dme-miR-277-3p X + 16955464 16955600 3'utr RhoGAP15B FlyBase G47072.1 GAAGTGCCCTCTCCCAGCTGCCAAACATAGATTTAACCGCCGTCTTGTGCATTTTTCTGTAGATATTCTGAATTTATTCGCAATATTAGGGAATATATACGTTTAGCAATATTTTTACGAACAATTTCGGGAATTTT 36 16955508 0.989428055 14 32 353 0.927272727 1.40654018 0.145454545 0.416666667 0.618181818 36 3 1 51 X:16955464-16955600 7 31.5 2669 FBgn0030808 1485.72 31.16 47.79666667 0.021201842 1.010911425 0.659041774 3 3 3 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 16955677 16955682 + X_16955677_16955682_+ 0.99977383 0.972173741 0.985973786 0.019516218 RhoGAP15B FBtr0110990|FBtr0290096 16955463|16955463 16955995|16956234 X + 16955657 16955694 3'utr RhoGAP15B FlyBase G62360.1 ATAATCACGTTTGATCAAATACCAAATTGTACATAAGC 15 16955684 0.62908066 5 14 92 0.941176471 1.204119983 0.058823529 0.133333333 0.235294118 15 1 0 16 X:16955657-16955694 6 RhoGAP15B FBtr0290096|FBtr0110990 16955463|16955463 16956234|16955995 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 16955648 16955697 3'utr RhoGAP15B FlyBase G47073.1 TTTCTGTAAATAATCACGTTTGATCAAATACCAAATTGTACATAAGCTTA 10 16955684 0.981726887 5 10 74 1 1.255272505 0.055555556 0.6 0.777777778 10 0 0 18 X:16955648-16955697 6 12.5 2670 FBgn0030808 1485.72 31.16 47.79666667 0.008413429 0.401155327 0.261524514 -7 -7 -7 0.25 dme-miR-190-5p 8mer-m1 ACATATCT X 16955758 16955765 + X_16955758_16955765_+ 0.549072087 0.532687059 0.540879573 0.011585945 RhoGAP15B FBtr0110990|FBtr0290096 16955463|16955463 16955995|16956234 X + 16955720 16955770 3'utr RhoGAP15B FlyBase G62361.1 AGTATATGCCCTTTGTCTTCAACATAGCTCGATATCTGACATATCTAGTGT 15 16955745 0.986126358 6 9 116 0.666666667 0.77815125 0.222222222 0.133333333 0.277777778 15 5 1 12 X:16955720-16955770 8 RhoGAP15B FBtr0290096|FBtr0110990 16955463|16955463 16956234|16955995 ACATATCT 8mer-m1 dme-miR-190-5p X + 16955713 16955779 3'utr RhoGAP15B FlyBase G47074.1 ATATCTAAGTATATGCCCTTTGTCTTCAACATAGCTCGATATCTGACATATCTAGTGTTTATCTACA 18 16955732 0.984737045 8 10 136 0.615384615 0.602059991 0.230769231 0.333333333 0.538461538 18 7 3 16 X:16955713-16955779 8 8 2671 FBgn0030808 1485.72 31.16 47.79666667 0.005384595 0.256739409 0.167375689 13 26 19.5 0.25 dme-miR-13b-2-5p 6mer3-8 TTTGAC X 16956622 16956627 - X_16956622_16956627_- 0.922725919 0.997935556 0.960330738 0.053181289 CG9086 FBtr0346190 16956230 16957493 X - 16956529 16956639 3'utr CG9086 FlyBase G68316.1 TTCAGAGCCCTGTTTGACATCCATCTCACTCTAACCCGAGGAACTCGATAATATTAGTCAAACCATGTTTACTTGATCAATATACTTAACACCCTATACGACTATATATTT 15 16956625 0.984174298 10 14 102 0.9375 1.176091259 0.25 0.066666667 0.125 15 1 0 15 X:16956529-16956639 6 CG9086 FBtr0346190 16956230 16957493 TTTGAC 6mer3-8 dme-miR-13b-2-5p X - 16956607 16956654 3'utr CG9086 FlyBase G51407.1 ACAGACACCCTCTCTTTCAGAGCCCTGTTTGACATCCATCTCACTCTA 5 16956626 0.964289719 4 5 27 1 0.903089987 0 0.4 0.625 5 0 0 8 X:16956607-16956654 6 6 2672 FBgn0030809 889.67 15.31666667 23.47 0.006744074 0.391730141 0.255645505 -2 -1 -1.5 0.25 dme-miR-308-3p 7mer-m1 TGTGATT X 16957424 16957430 - X_16957424_16957430_- 0.43373873 0.443019433 0.438379082 0.006562446 CG9086 FBtr0346190|FBtr0074415|FBtr0308839 16956230|16956943|16956943 16957493|16957493|16957493 X - 16957386 16957473 3'utr CG9086 FlyBase G68321.1 GGAAGCAGAGGACAGGCAGCAAAATGGAAATGGCGGCAGTCTATGTGATTATTACATACTAACATTAGGAGAGCCTATTTTTACGTCT 87 16957424 0.985897983 12 81 647 0.932038835 1.505149978 0.194174757 0.149425287 0.281553398 87 5 2 96 X:16957386-16957473 7 CG9086 FBtr0074415|FBtr0308839|FBtr0346190 16956943|16956943|16956230 16957493|16957493|16957493 TGTGATT 7mer-m1 dme-miR-308-3p X - 16957365 16957453 3'utr CG9086 FlyBase G51411.1 AAAATGGAAATGGCGGCAGTCTATGTGATTATTACATACTAACATTAGGAGAGCCTATTTTTACGTCTAAGCATTTTACTACTTATCCG 56 16957424 0.985419332 13 53 435 0.96 1.556302501 0.133333333 0.25 0.44 56 2 1 72 X:16957365-16957453 7 65.5 2673 FBgn0030809 889.67 15.31666667 23.47 0.073622804 4.276387378 2.790796762 -6 -6 -6 0.25 dme-miR-14-3p 7mer-m8 AAGACTG X 17079812 17079818 + X_17079812_17079818_+ 0.66903853 0.669439603 0.669239067 0.000283621 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 X + 17079767 17079843 3'utr CG4949 FlyBase G62366.1 AAAGCTGGAACGAATTTTCCAATCTCGAACGAATTTCGAGTTATTAAGACTGCATTTCCATTTTATTGACTTAAAGC 46 17079810 0.875800685 12 43 407 0.951612903 1.770852012 0.016129032 0.260869565 0.451612903 46 3 0 59 X:17079767-17079843 7 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 AAGACTG 7mer-m8 dme-miR-14-3p X + 17079797 17079844 3'utr CG4949 FlyBase G47078.1 GAATTTCGAGTTATTAAGACTGCATTTCCATTTTATTGACTTAAAGCT 22 17079810 0.988156665 7 21 191 0.931034483 0.954242509 0 0.318181818 0.482758621 22 0 2 27 X:17079797-17079844 7 29.5 2674 FBgn0030813 105.3333333 6.336666667 9.69 0.280063291 4.655444503 3.044375645 2 2 2 0.25 dme-miR-14-3p 6mer3-8 AAGACT X 17080072 17080077 + X_17080072_17080077_+ 0.926020473 0.999820173 0.962920323 0.052184268 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 X + 17080053 17080091 3'utr CG4949 FlyBase G62367.1 CGAATGCTCGATCAAATATAAGACTTTATTATAGTATAC 24 17080080 0.603818201 6 23 212 0.96875 1.190331698 0.03125 0.25 0.4375 24 0 1 31 X:17080053-17080091 6 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 AAGACT 6mer3-8 dme-miR-14-3p X + 17080045 17080091 3'utr CG4949 FlyBase G47079.1 GAAGCAATCGAATGCTCGATCAAATATAAGACTTTATTATAGTATAC 16 17080080 0.712191201 4 14 127 0.954545455 1.322219295 0.181818182 0.25 0.454545455 16 1 0 21 X:17080045-17080091 6 19 2675 FBgn0030813 105.3333333 6.336666667 9.69 0.180379747 2.998421883 1.960784314 -8 -8 -8 0.25 dme-bantam-3p 8mer-A1 TGATCTCA X 17080449 17080456 + X_17080449_17080456_+ 0.628334975 0.628793409 0.628564192 0.000324138 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 X + 17080394 17080470 3'utr CG4949 FlyBase G62369.1 GATTGGAATCCGATCTCCGCATCCCAGCCTCATATGTAGTCCAGCATGCCGCTTATGATCTCAAAGGCATCCCGAGC 30 17080449 0.974939437 6 30 186 1 1.51851394 0.696969697 0.1 0.181818182 30 0 0 33 X:17080394-17080470 8 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 TGATCTCA 8mer-A1 dme-bantam-3p X + 17080429 17080460 3'utr CG4949 FlyBase G47081.1 GTAGTCCAGCATGCCGCTTATGATCTCAAAGG 10 17080448 0.689326875 3 9 61 0.9 1.255272505 0.7 0.7 0.85 10 2 0 18 X:17080429-17080460 8 19 2676 FBgn0030813 105.3333333 6.336666667 9.69 0.180379747 2.998421883 1.960784314 0 1 0.5 0.25 dme-miR-317-5p 6mer2-7 TATCCC X 17150398 17150403 + X_17150398_17150403_+ 0.999985864 0.995917319 0.997951592 0.002876935 CG5010 FBtr0343291|FBtr0074387 17150298|17150298 17150647|17150647 X + 17150277 17150526 stop_codon CG5010 FlyBase G62399.1 AGCAGAGCCACCATCTCCAGTAGAGGGCCCAGCTCCGGTAGAATATCATCTGGCCAAGCACCGGCGGATGAACGCAGCCGGATGAACCCATCGGATGAACACCTCCGGATGAACTCTGTCCTATCCCTTCGTTTAGTTCTTAATTGTTTAATTGCAAGCATCTGAAAGAAAGCATTGTTTAATTGTAGTGCAAAATGAAATGTTAAATAGAAAATCCCGTTGGCAGCCCAAAACCCTTTCCAAAAAAAAA 111 17150398 0.999986539 32 107 651 0.965034965 2.139879086 0.251748252 0.198198198 0.377622378 111 5 0 138 X:17150277-17150526 6 CG5010 FBtr0343291|FBtr0074387 17150298|17150298 17150647|17150647 TATCCC 6mer2-7 dme-miR-317-5p X + 17150352 17150423 3'utr CG5010 FlyBase G47099.1 AGCCGGATGAACCCATCGGATGAACACCTCCGGATGAACTCTGTCCTATCCCTTCGTTTAGTTCTTAATTGT 34 17150398 0.982637935 11 31 228 0.928571429 1.716003344 0.035714286 0.382352941 0.625 34 4 0 52 X:17150352-17150423 6 32.5 2677 FBgn0260747 667.7266667 81.68 125.22 0.048672611 0.397894221 0.259543204 0 0 0 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 17241577 17241583 - X_17241577_17241583_- 0.77130949 0.770964219 0.771136854 0.000244164 CG8915 FBtr0339780|FBtr0339780|FBtr0339780|FBtr0074447|FBtr0074447|FBtr0074447 17240466|17240466|17240466|17241265|17241265|17241265 17241817|17241817|17241817|17241817|17241817|17241817 X - 17241563 17241657 3'utr CG8915 FlyBase G68397.1 TCCACTGCACTTCTTACATATTAAGGTATATCTAAGGTAGCACACACGATATCTTAACTATATTCCTTACATGTTGTGATACAAGAAGGCGCAAA 84 17241584 0.95910057 9 77 554 0.907407407 1.146128036 0.018518519 0.238095238 0.407407407 84 4 6 98 X:17241563-17241657 7 CG8915 FBtr0339780|FBtr0339780|FBtr0339780|FBtr0074447|FBtr0074447|FBtr0074447 17240466|17240466|17240466|17241265|17241265|17241265 17241817|17241817|17241817|17241817|17241817|17241817 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 17241565 17241623 3'utr CG8915 FlyBase G51462.1 AGGTAGCACACACGATATCTTAACTATATTCCTTACATGTTGTGATACAAGAAGGCGCA 54 17241585 0.981921612 9 48 364 0.87654321 0.897015839 0 0.388888889 0.592592593 54 2 8 71 X:17241565-17241623 7 64 2678 FBgn0030833 168.33 5.216666667 8 0.380205549 12.26837061 8 1 2 1.5 0.25 dme-miR-79-3p 7mer-A1 AGCTTTA X 17305161 17305167 + X_17305161_17305167_+ 0.685037985 0.780642304 0.732840144 0.067602449 CG5445 FBtr0074427|FBtr0074428|FBtr0339777|FBtr0339778|FBtr0074425 17304836|17304836|17304836|17304836|17304836 17305475|17305475|17305475|17305475|17305475 X + 17305144 17305198 3'utr CG5445 FlyBase G62414.1 TCGGTGTCAGACAGATCAGCTTTATATATATATATCGATATGTCGCGAAGGGAGC 23 17305159 0.97624235 6 18 164 0.848484848 1.447158031 0.121212121 0.347826087 0.545454545 23 5 0 28 X:17305144-17305198 7 CG5445 FBtr0339778|FBtr0074425|FBtr0074428|FBtr0339777|FBtr0074427 17304836|17304836|17304836|17304836|17304836 17305475|17305475|17305475|17305475|17305475 AGCTTTA 7mer-A1 dme-miR-79-3p X + 17305131 17305189 3'utr CG5445 FlyBase G47110.1 CCACTCCTTAATTTCGGTGTCAGACAGATCAGCTTTATATATATATATCGATATGTCGC 10 17305159 0.985392029 4 10 83 1 1.113943352 0.153846154 0.3 0.461538462 10 0 0 13 X:17305131-17305189 7 14.5 2679 FBgn0030838 342.0933333 22.24 33.86 0.042386093 0.651978417 0.428233904 2 2 2 0.25 dme-miR-8-3p 7mer-m8 CAGTATT X 17623353 17623359 - X_17623353_17623359_- 0.544093839 0.556142742 0.550118291 0.008519859 stas FBtr0074487 17623219 17623694 X - 17623328 17623423 3'utr stas FlyBase G68462.1 ACTTTTGCATCATATATTTCCATCAATCGTTTTTAAGTTAGTGAATTTTTGTTTAGTGCTATTGCAGTATTTACTAGAAAAGTTCTCCTCTAAGTA 112 17623362 0.83031074 8 111 1260 0.9921875 2.103803721 0.234375 0.142857143 0.25 112 1 0 127 X:17623328-17623423 7 stas FBtr0074487 17623219 17623694 CAGTATT 7mer-m8 dme-miR-8-3p X - 17623333 17623538 3'utr stas FlyBase G51501.1 TTTTCGGAATGCCACTTTGGGTCTCGATCCACTATGTTTAAGACAACTACAAAATATCTGTGTTTATCCTATTATTAAAATTATTAATGTTTTCTGAACTTGTTCTTACCAAACAACTTTTGCATCATATATTTCCATCAATCGTTTTTAAGTTAGTGAATTTTTGTTTAGTGCTATTGCAGTATTTACTAGAAAAGTTCTCCTCT 110 17623362 0.990887901 21 104 1104 0.957055215 2.193124598 0.214723926 0.327272727 0.54601227 110 7 0 156 X:17623333-17623538 7 81.5 2680 FBgn0030850 1912.336667 122.8733333 188.6933333 0.042618019 0.663284683 0.43191775 3 3 3 0.25 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT X 17640635 17640640 - X_17640635_17640640_- 0.999967958 0.614732855 0.807350406 0.272402352 RhoGAPp190 FBtr0074481|FBtr0333661|FBtr0333659|FBtr0333662|FBtr0333660|FBtr0074482|FBtr0074483 17640504|17639145|17639145|17639145|17639145|17639145|17639145 17641617|17641617|17641617|17641617|17641617|17641617|17641617 X - 17640573 17640664 3'utr RhoGAPp190 FlyBase G68488.1 TAAATACCACTAAATGTCTGTGTGTCTAGTATAGGAGAAAGTAGGAGAGGTGGAGCCGTAGGAGCAGGGGGAGGGGGAGAGAAAGGATGAGC 18 17640641 0.984977476 9 17 128 0.95 1.278753601 0.25 0.111111111 0.2 18 1 0 19 X:17640573-17640664 6 RhoGAPp190 FBtr0333660|FBtr0333662|FBtr0074483|FBtr0074482|FBtr0074481|FBtr0333659|FBtr0333661 17639145|17639145|17639145|17639145|17640504|17639145|17639145 17641617|17641617|17641617|17641617|17641617|17641617|17641617 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" X - 17640566 17640665 3'utr RhoGAPp190 FlyBase G51519.1 TTAAATACCACTAAATGTCTGTGTGTCTAGTATAGGAGAAAGTAGGAGAGGTGGAGCCGTAGGAGCAGGGGGAGGGGGAGAGAAAGGATGAGCGAAGCGA 8 17640640 0.9804256 5 8 53 1 1.176091259 0.4 0.625 0.8 8 0 0 15 X:17640566-17640665 6 10.5 2681 FBgn0026375 866.7733333 14.19333333 21.75666667 0.012113894 0.739783936 0.482610694 1 0 0.5 0.25 dme-miR-318-3p 7mer-A1 CCAGTGA X 17668624 17668630 + X_17668624_17668630_+ 0.669321515 0.559615962 0.614468739 0.077573503 beta-Spec FBtr0334405 17667960 17669371 X + 17668568 17668660 3'utr beta-Spec FlyBase G62494.1 ATTGACCTTCCGCGGTGAGCCCAGCTACGATCTGCAAAACGCTGCCATCGAAATTGCCAGTGATTACACCAAGAAGAAGCACGTTCTGCGAGT 24 17668632 0.896149945 6 23 95 0.965517241 1.447158031 0.24137931 0.166666667 0.310344828 24 1 0 28 X:17668568-17668660 7 beta-Spec FBtr0334405 17667960 17669371 CCAGTGA 7mer-A1 dme-miR-318-3p X + 17668613 17668648 3'utr beta-Spec FlyBase G47158.1 CATCGAAATTGCCAGTGATTACACCAAGAAGAAGCA 9 17668632 0.954673847 2 8 36 0.928571429 1.113943352 0.285714286 0.444444444 0.642857143 9 1 0 13 X:17668613-17668648 7 13 2682 FBgn0250788 4584.71 71.70666667 109.7433333 0.002835512 0.181294161 0.118458221 -8 -8 -8 0.25 dme-miR-980-3p 7mer-A1 GCAGCTA X 17668969 17668975 + X_17668969_17668975_+ 0.773300843 0.702795284 0.738048064 0.049854917 beta-Spec FBtr0334404|FBtr0074454|FBtr0334405 17668936|17668936|17667960 17669371|17669371|17669371 X + 17668943 17669050 3'utr beta-Spec FlyBase G62496.1 CAGCCGTAACGCAACCATAAGCAAGAGCAGCTAATTAAAACAAATAACAAATAACATGAAATGATATAATACAAATGCAAAACGACAACAAATTATACAGCAAAAATT 36 17668977 0.943899992 8 29 116 0.842105263 1.505149978 0 0.055555556 0.105263158 36 6 0 32 X:17668943-17669050 7 beta-Spec FBtr0334405|FBtr0074454|FBtr0334404 17667960|17668936|17668936 17669371|17669371|17669371 GCAGCTA 7mer-A1 dme-miR-980-3p X + 17668943 17668980 3'utr beta-Spec FlyBase G47160.1 CAGCCGTAACGCAACCATAAGCAAGAGCAGCTAATTAA 8 17668960 0.949219321 3 6 24 0.727272727 0.903089987 0 0.375 0.545454545 8 3 0 8 X:17668943-17668980 7 16 2683 FBgn0250788 4584.71 71.70666667 109.7433333 0.003489861 0.223131276 0.145794733 -8 9 0.5 0.25 dme-miR-252-5p 8mer-m1 GTACTTAG X 17821339 17821346 - X_17821339_17821346_- 0.632160953 0.633737657 0.632949305 0.001114895 Socs16D FBtr0310310|FBtr0074473 17820762|17820773 17822326|17822326 X - 17821279 17821382 3'utr Socs16D FlyBase G68544.1 AAAGCGAGCGAATTATGATATAACCATTAACGCATTGTACTTAGTTTAATCCATGTCATGTACACAAATGATCGATTGCCAGATGGAAAGAATGGCGAACACAC 43 17821347 0.982730105 8 42 317 0.982142857 1.740362689 0.053571429 0.279069767 0.446428571 43 1 0 55 X:17821279-17821382 8 Socs16D FBtr0074473|FBtr0310310 17820773|17820762 17822326|17822326 GTACTTAG 8mer-m1 dme-miR-252-5p X - 17821282 17821408 3'utr Socs16D FlyBase G51559.1 GCAACGCCCGTGCCCAAAGGTCCTTGAAAGCGAGCGAATTATGATATAACCATTAACGCATTGTACTTAGTTTAATCCATGTCATGTACACAAATGATCGATTGCCAGATGGAAAGAATGGCGAACA 33 17821347 0.975830784 10 33 208 1 1.73239376 0.092592593 0.454545455 0.666666667 33 0 0 54 X:17821282-17821408 8 17.5 2684 FBgn0030869 790.3733333 19.79 30.42 0.022141435 0.884284992 0.575279421 1 1 1 0.25 dme-miR-1008-3p 8mer-A1 AGCTGTGA X 17821556 17821563 - X_17821556_17821563_- 0.638995189 0.638028111 0.63851165 0.000683843 Socs16D FBtr0310310|FBtr0074473 17820762|17820773 17822326|17822326 X - 17821513 17821582 3'utr Socs16D FlyBase G68545.1 ACTTTTATGCTTGCCTTTTAGCTGTGATTTAAATAAGTCGTCGAATGTTAATTGGAAGACGATGTGCAGT 61 17821565 0.992139498 12 56 632 0.931506849 1.531478917 0.178082192 0.163934426 0.301369863 61 4 1 68 X:17821513-17821582 8 Socs16D FBtr0074473|FBtr0310310 17820773|17820762 17822326|17822326 AGCTGTGA 8mer-A1 dme-miR-1008-3p X - 17821535 17821576 3'utr Socs16D FlyBase G51560.1 ATGCTTGCCTTTTAGCTGTGATTTAAATAAGTCGTCGAATGT 52 17821554 0.62935682 11 48 531 0.933333333 1.62324929 0.244444444 0.538461538 0.733333333 52 5 1 84 X:17821535-17821576 8 54 2685 FBgn0030869 790.3733333 19.79 30.42 0.068322143 2.728650834 1.775147929 2 -9 -3.5 0.25 "dme-miR-995-3p,dme-miR-998-3p" 7mer-A1 GGTGCTA X 17821924 17821930 - X_17821924_17821930_- 0.819482723 0.822999729 0.821241226 0.002486895 Socs16D FBtr0310310|FBtr0074473 17820762|17820773 17822326|17822326 X - 17821913 17821940 3'utr Socs16D FlyBase G68548.1 TTTTGTACTCGGTGCTATACTATAAATA 9 17821934 0.71350446 5 8 80 0.888888889 0.903089987 0 0 0 9 1 0 8 X:17821913-17821940 7 Socs16D FBtr0074473|FBtr0310310 17820773|17820762 17822326|17822326 GGTGCTA 7mer-A1 "dme-miR-995-3p,dme-miR-998-3p" X - 17821911 17821940 3'utr Socs16D FlyBase G51561.1 TTTTGTACTCGGTGCTATACTATAAATATT 9 17821936 0.627289222 6 8 83 0.857142857 1.079181246 0.071428571 0.444444444 0.642857143 9 2 0 12 X:17821911-17821940 7 9 2686 FBgn0030869 790.3733333 19.79 30.42 0.011387024 0.454775139 0.295857988 4 6 5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA X 1785854 1785861 + X_1785854_1785861_+ 0.477810752 0.648756854 0.563283803 0.120877147 Adar FBtr0305499|FBtr0305499|FBtr0305499|FBtr0339272|FBtr0339272|FBtr0339272|FBtr0070300|FBtr0070300|FBtr0070300 1783753|1783753|1783753|1783753|1783753|1783753|1783753|1783753|1783753 1788065|1788065|1788065|1788065|1788065|1788065|1788065|1788065|1788065 X + 1785822 1785857 3'utr Adar FlyBase G58051.1 TGGATAAACCAAAGTTGATCTTATATAAAATACTGT 17 1785836 0.875302419 4 14 114 0.894736842 0.753327667 0.052631579 0.117647059 0.210526316 17 0 2 17 X:1785822-1785857 4 Adar FBtr0070300|FBtr0070300|FBtr0070300|FBtr0305499|FBtr0305499|FBtr0305499|FBtr0339272|FBtr0339272|FBtr0339272 1783753|1783753|1783753|1783753|1783753|1783753|1783753|1783753|1783753 1788065|1788065|1788065|1788065|1788065|1788065|1788065|1788065|1788065 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X + 1785822 1785870 3'utr Adar FlyBase G43913.1 TGGATAAACCAAAGTTGATCTTATATAAAATACTGTGATACTAAATTTT 16 1785837 0.840277577 6 12 113 0.695652174 0.903089987 0 0.375 0.565217391 16 6 1 16 X:1785822-1785870 8 9 2687 FBgn0026086 1030.723333 39.3 60.36 0.008731732 0.229007634 0.149105368 18 17 17.5 0.25 dme-miR-305-5p 7mer-m1 GTACAAT X 17858578 17858584 - X_17858578_17858584_- 0.765577143 0.765529158 0.765553151 3.39E-05 Arp8 FBtr0074544 17858377 17858769 X - 17858540 17858602 3'utr Arp8 FlyBase G68565.1 ACAAATTTATACAAGATTGTACAATTATTTTATTTTTAAAGACACCTAACAAATATGCAGAAT 7 17858579 0.99459099 6 6 63 0.777777778 0.84509804 0.111111111 0.285714286 0.444444444 7 2 0 7 X:17858540-17858602 7 Arp8 FBtr0074544 17858377 17858769 GTACAAT 7mer-m1 dme-miR-305-5p X - 17858573 17858643 3'utr Arp8 FlyBase G51575.1 AGCATTACCCTGGAGGAAGGAAACACTCCGGATGGGGTCATACAAATTTATACAAGATTGTACAATTATTT 11 17858584 0.87856763 7 11 55 1 1.146128036 0 0.181818182 0.357142857 11 0 0 14 X:17858573-17858643 7 4.5 2688 FBgn0030877 203.0033333 10.82333333 16.55 0.022167124 0.415768402 0.271903323 -5 0 -2.5 0.25 dme-bantam-3p 7mer-A1 GATCTCA X 17924507 17924513 - X_17924507_17924513_- 0.818004486 0.816543654 0.81727407 0.001032942 Sh FBtr0089658 17924305 17930123 X - 17924496 17924534 3'utr Sh FlyBase G68596.1 AAATTGAAACCAACCAAATTGGATCTCAAATCAAAGCAG 54 17924515 0.777553198 3 50 223 0.9375 1.477121255 0.046875 0.148148148 0.28125 54 3 1 60 X:17924496-17924534 7 Sh FBtr0089658 17924305 17930123 GATCTCA 7mer-A1 dme-bantam-3p X - 17924495 17924530 3'utr Sh FlyBase G51593.1 TGAAACCAACCAAATTGGATCTCAAATCAAAGCAGC 34 17924515 0.934119463 2 31 135 0.921568627 1.371067862 0.039215686 0.411764706 0.607843137 34 3 1 47 X:17924495-17924530 7 44 2689 FBgn0003380 28.61666667 0.493333333 0.783333333 1.537565521 89.18918919 56.17021277 2 2 2 0.25 dme-miR-317-3p 7mer-m8 TGTGTTC X 18078953 18078959 - X_18078953_18078959_- 0.659118113 0.661226326 0.660172219 0.001490723 CG7536 FBtr0343317|FBtr0343318|FBtr0074530 18078489|18078861|18078861 18079653|18079653|18079653 X - 18078916 18079015 3'utr CG7536 FlyBase G68597.1 AACTAGAGCTGATCCCGAACGGAATTGTACATAGTATACGTATGCTAGTGCCTGTGTGTGTTCTTTTCGCTCTGCGTGTGTGTGTGTGTGTGTGAGTGTG 28 18078952 0.991302797 8 26 277 0.96969697 1.505149978 0.212121212 0.142857143 0.272727273 28 1 0 32 X:18078916-18079015 7 CG7536 FBtr0074530|FBtr0343317|FBtr0343318 18078861|18078489|18078861 18079653|18079653|18079653 TGTGTTC 7mer-m8 dme-miR-317-3p X - 18078916 18079031 5'utr-coding CG7536 FlyBase G51596.1 AAGTTTAAAGAACTTAAACTAGAGCTGATCCCGAACGGAATTGTACATAGTATACGTATGCTAGTGCCTGTGTGTGTTCTTTTCGCTCTGCGTGTGTGTGTGTGTGTGTGAGTGTG 20 18078952 0.984385208 14 20 176 1 1.431363764 0.185185185 0.25 0.444444444 20 0 0 27 X:18078916-18079031 7 16 2690 FBgn0030890 573.73 20 30.81333333 0.027887682 0.8 0.519255733 -7 -7 -7 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 18079078 18079083 - X_18079078_18079083_- 0.733514616 0.66167423 0.697594423 0.050798834 CG7536 FBtr0343317|FBtr0343317|FBtr0343317|FBtr0343318|FBtr0343318|FBtr0343318|FBtr0074531|FBtr0074531|FBtr0074531|FBtr0074530|FBtr0074530|FBtr0074530 18078489|18078489|18078489|18078861|18078861|18078861|18079015|18079015|18079015|18078861|18078861|18078861 18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653 X - 18079056 18079115 5'utr CG7536 FlyBase G68598.1 CTGTCCACCTGTTGATTGATATACGACATAGACTGTGACCAAATCGAAACTTAAACTAAA 147 18079086 0.781455878 12 122 714 0.971428571 1.929418926 0.297142857 0.143835616 0.285714286 146 4 1 170 X:18079056-18079115 6 CG7536 FBtr0074531|FBtr0074531|FBtr0074531|FBtr0074530|FBtr0074530|FBtr0074530|FBtr0343317|FBtr0343317|FBtr0343317|FBtr0343318|FBtr0343318|FBtr0343318 18079015|18079015|18079015|18078861|18078861|18078861|18078489|18078489|18078489|18078861|18078861|18078861 18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X - 18079060 18079140 5'utr CG7536 FlyBase G51597.1 TAGATCTGCCTTATCTGTTATCTGTCTGTCCACCTGTTGATTGATATACGACATAGACTGTGACCAAATCGAAACTTAAAC 101 18079081 0.750316737 14 97 571 0.99378882 1.903089987 0.298136646 0.356435644 0.596273292 101 0 1 160 X:18079060-18079140 6 101 2691 FBgn0030890 573.73 20 30.81333333 0.176040995 5.05 3.277801817 3 -2 0.5 0.25 dme-miR-252-5p 8mer-m1 GTACTTAG X 18079247 18079254 - X_18079247_18079254_- 0.636630639 0.61693387 0.626782255 0.01392767 CG7536 FBtr0343317|FBtr0343318|FBtr0074531|FBtr0074530 18078489|18078861|18079015|18078861 18079653|18079653|18079653|18079653 X - 18079236 18079299 5'utr CG7536 FlyBase G68600.1 AATCCATACCTTCCACAGAAATTGGAGTAGAGAACGGCAGTATTAGTACTTAGAAAAGGCGAAC 10 18079252 0.967788521 5 10 52 1 1.041392685 0.181818182 0.1 0.181818182 10 0 0 11 X:18079236-18079299 8 CG7536 FBtr0074531|FBtr0074530|FBtr0343317|FBtr0343318 18079015|18078861|18078489|18078861 18079653|18079653|18079653|18079653 GTACTTAG 8mer-m1 dme-miR-252-5p X - 18079245 18079300 5'utr CG7536 FlyBase G51598.1 TAATCCATACCTTCCACAGAAATTGGAGTAGAGAACGGCAGTATTAGTACTTAGAA 6 18079257 0.952381365 3 6 25 1 1 0 0.5 0.7 6 0 0 10 X:18079245-18079300 8 5.5 2692 FBgn0030890 573.73 20 30.81333333 0.009586391 0.275 0.178494158 -2 3 0.5 0.25 dme-miR-34-5p 7mer-A1 ACTGCCA X 18088759 18088765 - X_18088759_18088765_- 0.819676803 0.819739767 0.819708285 4.45E-05 CG7206 FBtr0089576|FBtr0308352 18088723|18088723 18089007|18089869 X - 18088733 18088826 3'utr CG7206 FlyBase G68622.1 GGCCACTGACGACGTGTTCACCCAAGACTAAAAACTTGCACATATTAGAAGATCAGATTTGACTGCCATTTGCTACGTATAATAAAGTTTGTTT 73 18088768 0.98128655 14 69 502 0.93902439 1.886490725 0.195121951 0.109589041 0.207317073 73 5 0 77 X:18088733-18088826 7 CG7206 FBtr0089576|FBtr0308352 18088723|18088723 18089007|18089869 ACTGCCA 7mer-A1 dme-miR-34-5p X - 18088749 18088826 3'utr CG7206 FlyBase G51613.1 GGCCACTGACGACGTGTTCACCCAAGACTAAAAACTTGCACATATTAGAAGATCAGATTTGACTGCCATTTGCTACGT 55 18088768 0.978579715 12 52 368 0.946808511 1.171238756 0.287234043 0.454545455 0.680851064 55 0 5 89 X:18088749-18088826 7 53 2693 FBgn0030892 243 18.00333333 27.36 0.218106996 2.943899278 1.937134503 3 3 3 0.25 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG X 18097086 18097092 + X_18097086_18097092_+ 0.429238141 0.414871118 0.42205463 0.010159003 RhoGAP16F FBtr0074513|FBtr0307200|FBtr0307201|FBtr0343310 18096876|18096876|18096876|18096876 18097413|18097413|18097413|18097413 X + 18097057 18097112 3'utr RhoGAP16F FlyBase G62618.1 ATCCTCAACCCGAAACCGAACACCCCACTGTACCTGCCACACCTCTATACCCATTC 172 18097085 0.975605003 3 171 493 0.995024876 2.301029996 0 0.139534884 0.263681592 172 1 0 200 X:18097057-18097112 7 RhoGAP16F FBtr0307201|FBtr0074513|FBtr0343310|FBtr0307200 18096876|18096876|18096876|18096876 18097413|18097413|18097413|18097413 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" X + 18097060 18097109 3'utr RhoGAP16F FlyBase G47244.1 CTCAACCCGAAACCGAACACCCCACTGTACCTGCCACACCTCTATACCCA 84 18097085 0.972804142 2 82 245 0.968992248 1.795880017 0.007751938 0.357142857 0.581395349 84 3 1 125 X:18097060-18097109 7 127.5 2694 FBgn0030893 601.22 27.60666667 42.25333333 0.212068793 4.61844965 3.017513411 1 1 1 0.25 dme-miR-308-3p 8mer-m1 CTGTGATT X 18240797 18240804 - X_18240797_18240804_- 0.38045019 0.385542314 0.382996252 0.003600658 upd2 FBtr0300182 18240652 18241347 X - 18240784 18240818 3'utr upd2 FlyBase G68658.1 AATGCTTAAATCTACTGTGATTTATTTTAAGTACT 24 18240797 0.713651948 3 23 254 0.965517241 1.447158031 0.310344828 0.166666667 0.310344828 24 1 0 28 X:18240784-18240818 8 upd2 FBtr0300182 18240652 18241347 CTGTGATT 8mer-m1 dme-miR-308-3p X - 18240786 18240816 3'utr upd2 FlyBase G51649.1 TGCTTAAATCTACTGTGATTTATTTTAAGTA 9 18240797 0.655473911 3 9 99 1 1 0.3 0.111111111 0.2 9 0 0 10 X:18240786-18240816 8 16.5 2695 FBgn0030904 6 0.38 0.586666667 2.75 43.42105263 28.125 -7 -7 -7 0.25 dme-miR-8-3p 8mer-A1 CAGTATTA X 18241279 18241286 - X_18241279_18241286_- 0.671153021 0.66594464 0.66854883 0.003682895 upd2 FBtr0300182 18240652 18241347 X - 18241267 18241311 3'utr upd2 FlyBase G68661.1 CAGCCGGGTCAACATCACGCCCTTCCAGTATTATAGCGAGTACTT 13 18241288 0.774020328 4 11 83 0.866666667 0.812913357 0 0.153846154 0.266666667 13 1 1 13 X:18241267-18241311 8 upd2 FBtr0300182 18240652 18241347 CAGTATTA 8mer-A1 dme-miR-8-3p X - 18241273 18241301 3'utr upd2 FlyBase G51651.1 AACATCACGCCCTTCCAGTATTATAGCGA 6 18241288 0.838403907 2 5 32 0.888888889 0.903089987 0 0.333333333 0.555555556 6 1 0 8 X:18241273-18241301 8 9.5 2696 FBgn0030904 6 0.38 0.586666667 1.583333333 25 16.19318182 2 2 2 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA X 18284395 18284402 + X_18284395_18284402_+ 0.638069394 0.62975551 0.633912452 0.005878815 upd3 FBtr0113465|FBtr0113465|FBtr0113465 18283950|18283950|18283950 18284596|18284596|18284596 X + 18284359 18284417 3'utr upd3 FlyBase G62630.1 AAGTATACTAGATATACTTTGCCTTGTATTACGATGCTGTGATAGTAGATGATTAAAGT 34 18284393 0.766648922 8 27 289 0.8 1.028028724 0.55 0.176470588 0.3 34 6 2 32 X:18284359-18284417 8 upd3 FBtr0113465|FBtr0113465|FBtr0113465 18283950|18283950|18283950 18284596|18284596|18284596 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X + 18284368 18284419 3'utr upd3 FlyBase G47255.1 AGATATACTTTGCCTTGTATTACGATGCTGTGATAGTAGATGATTAAAGTAA 30 18284393 0.839112212 7 29 274 0.978723404 1.662757832 0.340425532 0.366666667 0.595744681 30 1 0 46 X:18284368-18284419 8 30 2697 FBgn0053542 45.60666667 2.493333333 3.816666667 0.657798567 12.03208556 7.860262009 2 2 2 0.25 dme-miR-1012-3p 7mer-A1 TGACTAA X 18501798 18501804 - X_18501798_18501804_- 0.785518979 0.562818747 0.674168863 0.157472892 Wnt5 FBtr0343046|FBtr0074623 18501399|18501554 18501837|18501837 X - 18501770 18501812 3'utr Wnt5 FlyBase G68723.1 AATGTTTGTGACTAAGCCATGAAGGAAATAATCGTATTTAAAC 6 18501809 0.982473773 4 6 32 1 0.954242509 0 0.5 0.666666667 6 0 0 9 X:18501770-18501812 7 Wnt5 FBtr0343046|FBtr0074623 18501399|18501554 18501837|18501837 TGACTAA 7mer-A1 dme-miR-1012-3p X - 18501782 18501839 stop_codon Wnt5 FlyBase G51694.1 AGAGCGTTGATTGAATTCGAATGTCTTAATGTTTGTGACTAAGCCATGAAGGAAATAA 8 18501793 0.933876318 5 7 36 1 1.230448921 0.588235294 0.875 0.941176471 8 0 0 17 X:18501782-18501839 7 5.5 2698 FBgn0010194 534.6666667 16.08666667 24.67666667 0.010286783 0.341898052 0.222882615 5 -11 -3 0.25 dme-bantam-3p 7mer-A1 GATCTCA X 1862231 1862237 - X_1862231_1862237_- 0.81839991 0.821544072 0.819971991 0.002223285 CG14814 FBtr0070369|FBtr0070370|FBtr0339494 1862133|1862133|1862007 1862327|1862327|1862327 X - 1862212 1862272 3'utr CG14814 FlyBase G64071.1 TGGTATATCATAGACAATTTGAAAAACTTAACTGAGATCTCAGTTCGTGCGAAGTAGTAGA 12 1862240 0.973021708 4 12 80 1 1.146128036 0.142857143 0.166666667 0.285714286 12 0 0 14 X:1862212-1862272 7 CG14814 FBtr0339494|FBtr0070370|FBtr0070369 1862007|1862133|1862133 1862327|1862327|1862327 GATCTCA 7mer-A1 dme-bantam-3p X - 1862222 1862253 3'utr CG14814 FlyBase G48303.1 TGAAAAACTTAACTGAGATCTCAGTTCGTGCG 5 1862240 0.706221503 2 5 32 1 0.77815125 0 0.2 0.333333333 5 0 0 6 X:1862222-1862253 7 7 2699 FBgn0023515 470.3333333 16.16 24.75 0.014883062 0.433168317 0.282828283 3 3 3 0.25 dme-miR-999-3p 7mer-A1 GTTAACA X 18624336 18624342 - X_18624336_18624342_- 0.727042514 0.69066574 0.708854127 0.025722282 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 X - 18624265 18624364 3'utr wgn FlyBase G68734.1 AACGCATATAGACGCACGTATTGTTAACATCACCCATATCCCATATCCTAGTACTAGTATCCAGAGTAAACAGTATCCTATAATCCCACCAACAACACAC 18 18624341 0.978538704 9 16 103 0.894736842 1.230448921 0 0.055555556 0.105263158 18 2 0 17 X:18624265-18624364 7 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 GTTAACA 7mer-A1 dme-miR-999-3p X - 18624314 18624363 3'utr wgn FlyBase G51702.1 ACGCATATAGACGCACGTATTGTTAACATCACCCATATCCCATATCCTAG 15 18624342 0.985775645 5 13 102 0.882352941 0.875061263 0 0.133333333 0.235294118 15 1 1 15 X:18624314-18624363 7 12 2700 FBgn0030941 765.4933333 38.51666667 59.04666667 0.015676165 0.31155344 0.203229084 -1 0 -0.5 0.25 dme-miR-190-5p 8mer-A1 ACATATCA X 18624381 18624388 - X_18624381_18624388_- 0.424346462 0.611008552 0.517677507 0.131990037 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 X - 18624365 18624426 3'utr wgn FlyBase G68735.1 ATCGTTGCGGAGTGGAACGAAACCAAGTAATATTGGCAACATATCAGCTTCTATATGCATGG 14 18624394 0.987569503 8 10 114 0.705882353 1.079181246 0.058823529 0.214285714 0.352941176 14 5 0 12 X:18624365-18624426 8 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 ACATATCA 8mer-A1 dme-miR-190-5p X - 18624366 18624407 3'utr wgn FlyBase G51703.1 AAACCAAGTAATATTGGCAACATATCAGCTTCTATATGCATG 7 18624398 0.851995796 6 7 52 1 1.079181246 0 0.428571429 0.666666667 7 0 0 12 X:18624366-18624407 8 9.5 2701 FBgn0030941 765.4933333 38.51666667 59.04666667 0.012410297 0.246646473 0.160889692 6 10 8 0.25 dme-miR-305-5p 7mer-A1 GTACAAA X 18624777 18624783 - X_18624777_18624783_- 0.75043893 0.752704939 0.751571934 0.001602304 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 X - 18624707 18624833 3'utr wgn FlyBase G68738.1 ACGATACGCAAACGGAACCGGAAACGTAAATGGATTAGAGAAAGAACTTTGTACAAACAGCCGCTTAAAAGTAGGAGGAGGACGGAGGAAGGAAACCGAAACTATTATTATTTTTTATATTATTAAT 192 18624785 0.949667208 10 183 734 0.956896552 2.045322979 0.211206897 0.171875 0.314655172 192 9 1 222 X:18624707-18624833 7 wgn FBtr0074617|FBtr0342843 18624040|18624040 18624924|18626055 GTACAAA 7mer-A1 dme-miR-305-5p X - 18624727 18624862 3'utr wgn FlyBase G51705.1 GCGGGACGAAGCGAGAATGGATCCGGAACACGATACGCAAACGGAACCGGAAACGTAAATGGATTAGAGAAAGAACTTTGTACAAACAGCCGCTTAAAAGTAGGAGGAGGACGGAGGAAGGAAACCGAAACTATTA 161 18624785 0.931806281 12 153 561 0.94893617 2.047274867 0.293617021 0.354037267 0.557446809 161 11 1 223 X:18624727-18624862 7 152.5 2702 FBgn0030941 765.4933333 38.51666667 59.04666667 0.199217934 3.959324968 2.582702947 2 2 2 0.25 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA X 18635679 18635684 - X_18635679_18635684_- 0.999644324 0.979190066 0.989417195 0.014463304 Rip11 FBtr0343020|FBtr0343020|FBtr0343021|FBtr0343021|FBtr0301545|FBtr0301545|FBtr0343019|FBtr0343019|FBtr0074616|FBtr0074616 18635640|18635640|18635640|18635640|18635640|18635640|18635640|18635640|18635640|18635640 18636833|18636833|18636312|18636312|18636312|18636312|18636833|18636833|18637354|18637354 X - 18635667 18635717 3'utr Rip11 FlyBase G68744.1 CACAGTTGAAATATGTTGATACTACAATGATTTTACTTATTGATATAAACG 20 18635689 0.745427231 11 17 180 0.863636364 1.278753601 0.318181818 0.1 0.181818182 20 3 0 19 X:18635667-18635717 6 Rip11 FBtr0074616|FBtr0074616|FBtr0343019|FBtr0343019|FBtr0301545|FBtr0301545|FBtr0343021|FBtr0343021|FBtr0343020|FBtr0343020 18635640|18635640|18635640|18635640|18635640|18635640|18635640|18635640|18635640|18635640 18637354|18637354|18636833|18636833|18636312|18636312|18636312|18636312|18636833|18636833 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" X - 18635660 18635720 3'utr Rip11 FlyBase G51709.1 ACACACAGTTGAAATATGTTGATACTACAATGATTTTACTTATTGATATAAACGCAAGCAA 12 18635690 0.978335919 7 12 99 1 1.278753601 0 0.5 0.684210526 12 0 0 19 X:18635660-18635720 6 8.5 2703 FBgn0027335 6668.076667 280.47 431.2966667 0.00127473 0.030306272 0.019708012 5 6 5.5 0.25 dme-miR-317-3p 6mer3-8 TGTGTT X 18635907 18635912 - X_18635907_18635912_- 0.518385036 0.938043022 0.728214029 0.296743018 Rip11 FBtr0343020|FBtr0343021|FBtr0301545|FBtr0343019|FBtr0074616 18635640|18635640|18635640|18635640|18635640 18636833|18636312|18636312|18636833|18637354 X - 18635896 18635968 3'utr Rip11 FlyBase G68746.1 AAGCGATTTGTCGTGTTGCGAGTCCTTGTCAATTGATTGAAATTATCCGAAAGTATTGTGTTTGTTTTTTTGT 15 18635913 0.829821829 9 15 139 1 1.255272505 0.111111111 0.2 0.333333333 15 0 0 18 X:18635896-18635968 6 Rip11 FBtr0074616|FBtr0343019|FBtr0301545|FBtr0343021|FBtr0343020 18635640|18635640|18635640|18635640|18635640 18637354|18636833|18636312|18636312|18636833 TGTGTT 6mer3-8 dme-miR-317-3p X - 18635902 18635961 3'utr Rip11 FlyBase G51711.1 TTGTCGTGTTGCGAGTCCTTGTCAATTGATTGAAATTATCCGAAAGTATTGTGTTTGTTT 14 18635926 0.984816777 7 14 115 1 1.342422681 0.227272727 0.428571429 0.636363636 14 0 0 22 X:18635902-18635961 6 8 2704 FBgn0027335 6668.076667 280.47 431.2966667 0.001199746 0.02852355 0.018548717 1 14 7.5 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA X 18636806 18636813 - X_18636806_18636813_- 0.448343255 0.504291576 0.476317415 0.039561422 Rip11 FBtr0343020|FBtr0343019|FBtr0074616 18635640|18635640|18635640 18636833|18636833|18637354 X - 18636755 18636833 5'utr Rip11 FlyBase G68750.1 GTGCTGCGCATGTTGCAAATTGCATTTAAGTAGACACTTAACCAACAAATCCCAACAACAACAACATCACCACCACCAA 47 18636814 0.983310187 5 45 344 0.981818182 1.73239376 0.309090909 0.170212766 0.290909091 47 1 0 54 X:18636755-18636833 8 Rip11 FBtr0074616|FBtr0343019|FBtr0343020 18635640|18635640|18635640 18637354|18636833|18636833 TGCATTTA 8mer-A1 dme-miR-277-3p X - 18636784 18636835 stop_codon Rip11 FlyBase G51716.1 AAGTGCTGCGCATGTTGCAAATTGCATTTAAGTAGACACTTAACCAACAAAT 27 18636814 0.844795357 4 25 202 0.973684211 1.568201724 0.421052632 0.37037037 0.552631579 27 1 0 37 X:18636784-18636835 8 35.5 2705 FBgn0027335 6668.076667 280.47 431.2966667 0.005323874 0.126573252 0.082309934 1 1 1 0.25 dme-miR-283-5p 6mer3-8 TGATAT X 18653779 18653784 - X_18653779_18653784_- 0.999663949 0.997525372 0.99859466 0.001512148 CG6659 FBtr0074613|FBtr0074612 18653390|18653390 18653985|18653985 X - 18653741 18653818 3'utr CG6659 FlyBase G68779.1 AATCCCAAATCCCGATCCCGCGTAGTAGCTGATTTGATATGGCAGATTGGCGATTAGAAGGAGGCCCCTTCCGCTAGA 10 18653772 0.958460538 6 10 49 1 1.041392685 0.363636364 0.1 0.181818182 10 0 0 11 X:18653741-18653818 6 CG6659 FBtr0074613|FBtr0074612 18653390|18653390 18653985|18653985 TGATAT 6mer3-8 dme-miR-283-5p X - 18653743 18653844 3'utr CG6659 FlyBase G51741.1 CGGATGCCCGAACACATCTCGCACCCAATCCCAAATCCCGATCCCGCGTAGTAGCTGATTTGATATGGCAGATTGGCGATTAGAAGGAGGCCCCTTCCGCTA 8 18653779 0.974690541 7 8 41 1 1.204119983 0.125 0.625 0.8125 8 0 0 16 X:18653743-18653844 6 4 2706 FBgn0030946 482.2966667 17.24333333 26.43666667 0.008293651 0.23197371 0.151305006 -12 -5 -8.5 0.25 dme-miR-1008-3p 7mer-m8 AGCTGTG X 18653909 18653915 - X_18653909_18653915_- 0.596237524 0.623736148 0.609986836 0.019444447 CG6659 FBtr0074613|FBtr0074612 18653390|18653390 18653985|18653985 X - 18653831 18653992 stop_codon CG6659 FlyBase G68780.1 CATATAGGGCTGGCCGTCCACGGAGGCGGCGCGATGATGGAATGCTGGAATCGTGTTGTGTTGTACGTAGCTGTGTGAGCTGTGTGACTAGGATTTAGCATTTTACGATGTGTGTGTATTATGATTACGTTTAGTATTGCCCCAACCTCGGATGCCCGAACA 45 18653917 0.882371976 19 41 353 0.92 1.662757832 0.22 0.111111111 0.2 45 4 0 46 X:18653831-18653992 7 CG6659 FBtr0074613|FBtr0074612 18653390|18653390 18653985|18653985 AGCTGTG 7mer-m8 dme-miR-1008-3p X - 18653857 18654001 stop_codon CG6659 FlyBase G51742.1 CGAGATGTCCATATAGGGCTGGCCGTCCACGGAGGCGGCGCGATGATGGAATGCTGGAATCGTGTTGTGTTGTACGTAGCTGTGTGAGCTGTGTGACTAGGATTTAGCATTTTACGATGTGTGTGTATTATGATTACGTTTAGTA 43 18653917 0.982407413 15 40 306 0.954545455 1.799340549 0.303030303 0.348837209 0.575757576 43 3 0 63 X:18653857-18654001 7 26 2707 FBgn0030946 482.2966667 17.24333333 26.43666667 0.053908728 1.507829113 0.983482537 2 2 2 0.25 dme-miR-92b-3p 6mer3-8 GTGCAA X 18661019 18661024 + X_18661019_18661024_+ 0.680920125 0.999996918 0.840458521 0.225621369 fu FBtr0074602 18660455 18661204 X + 18661004 18661049 3'utr fu FlyBase G62688.1 ATTCAAGTGTGGTTTGTGCAAAATAGATTGATAGCATTATAGTTTG 10 18661017 0.72867858 3 8 86 0.909090909 1 0.181818182 0.1 0.181818182 10 1 0 10 X:18661004-18661049 6 fu FBtr0074602 18660455 18661204 GTGCAA 6mer3-8 dme-miR-92b-3p X + 18661002 18661058 3'utr fu FlyBase G47299.1 ATATTCAAGTGTGGTTTGTGCAAAATAGATTGATAGCATTATAGTTTGTATATCGAA 12 18661016 0.84731103 6 11 110 0.947368421 1.255272505 0.421052632 0.333333333 0.578947368 12 1 0 18 X:18661002-18661058 6 8.5 2708 FBgn0001079 159.36 5.946666667 9.103333333 0.053338353 1.429372197 0.933723911 2 3 2.5 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 18781249 18781254 + X_18781249_18781254_+ 0.999950932 0.99997821 0.999964571 1.93E-05 CG6891 FBtr0074631|FBtr0334453|FBtr0074632 18781193|18781193|18781193 18781345|18781345|18781345 X + 18781229 18781320 3'utr CG6891 FlyBase G62699.1 TTTGCAACTCTTAACTGCTTACCAAACTGCTCCTTTCTCTTTAATTATTATGAATTAATTTTATGAAATTTAAAAACTGTACATTTTATGAA 47 18781263 0.788561177 13 40 418 0.859649123 1.088136089 0.087719298 0.14893617 0.298245614 47 5 3 49 X:18781229-18781320 6 CG6891 FBtr0334453|FBtr0074632|FBtr0074631 18781193|18781193|18781193 18781345|18781345|18781345 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 18781239 18781283 3'utr CG6891 FlyBase G47310.1 TTAACTGCTTACCAAACTGCTCCTTTCTCTTTAATTATTATGAAT 33 18781257 0.721924709 8 32 306 0.977272727 1.33243846 0.022727273 0.272727273 0.454545455 33 0 1 43 X:18781239-18781283 6 34.5 2709 FBgn0030955 851.42 106.5933333 161.8266667 0.040520542 0.323660016 0.213191069 -14 -8 -11 0.25 dme-miR-252-5p 6mer3-8 GTACTT X 18793314 18793319 + X_18793314_18793319_+ 0.744104268 0.72536786 0.734736064 0.013248635 Atg101 FBtr0074635 18792553 18793517 X + 18793253 18793405 3'utr Atg101 FlyBase G62716.1 TGTTTAGATCGAGGCAAGTAGCGGTGAGGCGGTAGAAATGTATGTATAAAAGATTGTGATTGTACTTGTAGTGATTAAACTATAGTACGGACTCCATGTATCCATGGATATCCAATATGTAGACATGTATGTATGTAAATCAATGTTTATCTA 428 18793313 0.99077693 22 402 4174 0.941176471 1.490426721 0.348884381 0.140186916 0.253549696 428 15 14 464 X:18793253-18793405 6 Atg101 FBtr0074635 18792553 18793517 GTACTT 6mer3-8 dme-miR-252-5p X + 18793255 18793389 3'utr Atg101 FlyBase G47323.1 TTTAGATCGAGGCAAGTAGCGGTGAGGCGGTAGAAATGTATGTATAAAAGATTGTGATTGTACTTGTAGTGATTAAACTATAGTACGGACTCCATGTATCCATGGATATCCAATATGTAGACATGTATGTATGTA 347 18793313 0.990353791 18 328 3332 0.940740741 1.927712462 0.368518519 0.409221902 0.62037037 347 27 5 508 X:18793255-18793389 6 372.5 2710 FBgn0030960 179.3333333 11.9 18.35333333 2.077137546 31.30252101 20.29604068 1 1 1 0.25 dme-miR-184-5p 8mer-m1 TGATAAGG X 1881446 1881453 - X_1881446_1881453_- 0.611514041 0.563339359 0.5874267 0.034064586 trr FBtr0070362|FBtr0070363 1881311|1881311 1882155|1882155 X - 1881418 1881483 3'utr trr FlyBase G64099.1 TCGTGCGCAACCTTCTTTGAATATATACACTGATAAGGATATGAACACCTACTTCTATTTTATTTT 21 1881460 0.961421611 9 20 159 0.958333333 1.361727836 0.25 0.142857143 0.25 21 1 0 23 X:1881418-1881483 8 trr FBtr0070362|FBtr0070363 1881311|1881311 1882155|1882155 TGATAAGG 8mer-m1 dme-miR-184-5p X - 1881430 1881477 3'utr trr FlyBase G48319.1 GCAACCTTCTTTGAATATATACACTGATAAGGATATGAACACCTACTT 15 1881459 0.954735205 6 13 96 0.818181818 0.954242509 0.318181818 0.4 0.590909091 15 3 1 18 X:1881430-1881477 8 14 2711 FBgn0023518 907.1566667 13.24 20.31 0.015432836 1.057401813 0.689315608 7 6 6.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA X 18831927 18831933 + X_18831927_18831933_+ 0.698803335 0.666502373 0.682652854 0.022840185 CG7101 FBtr0074639 18831799 18832123 X + 18831868 18831974 3'utr CG7101 FlyBase G62725.1 ATACTTAAGCAATGGATAAATGTAACGTTTTAATAGCGTTAATATTTTGAATTTATATCCTAGTCATCGGAAATGTTTTTCCAAACGAACTTGAATTTAAAATCGTA 150 18831925 0.884279782 16 145 1192 0.964071856 2.206825876 0.233532934 0.093333333 0.185628743 150 6 0 161 X:18831868-18831974 7 CG7101 FBtr0074639 18831799 18832123 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X + 18831752 18831972 stop_codon CG7101 FlyBase G47329.1 CTTCCGGGCCATCGATCTCGAACGGCATGTGTGTGAGGAACATCCGTAGGGCAGTCAACCTAGCCGGAATCGTAGATACCTGAGCGACATCTCACGTCCAGAACTACGATTAATATATACTTAAGCAATGGATAAATGTAACGTTTTAATAGCGTTAATATTTTGAATTTATATCCTAGTCATCGGAAATGTTTTTCCAAACGAACTTGAATTTAAAATCG 153 18831925 0.983825919 29 132 1005 0.884057971 1.359361103 0.289855072 0.296052632 0.483091787 152 17 7 183 X:18831752-18831972 7 113.5 2712 FBgn0030963 43.33333333 3.66 5.636666667 2.619230769 31.01092896 20.13601419 2 2 2 0.25 dme-miR-307a-3p 7mer-m8 GGTTGTG X 18841222 18841228 + X_18841222_18841228_+ 0.414440183 0.687111647 0.550775915 0.192807796 Pvf1 FBtr0343604 18841137 18842901 X + 18841157 18841373 3'utr Pvf1 FlyBase G62736.1 CAGGGATCCACGGGCAGGGATTGGTTGCGATCCGGTCTGGTCTGATCTGGTCTGGTCTGGGGAACGGTTGTGCTCGTCCTTGGTTGGTTTGCGGTTGGTTCCTGGTGGTGGCTCCCTAGCTTAAGCTGTCCCAACAAGTTCCTCGCTTATTTATTATAGCCATTTCGTACAGTTGATAGTTTTCTGGCAAATAATAGAATTACTTAATAGAATTTAA 93 18841213 0.98972878 38 87 760 0.943396226 1.397940009 0.377358491 0.129032258 0.235849057 93 3 3 100 X:18841157-18841373 7 Pvf1 FBtr0343604 18841137 18842901 GGTTGTG 7mer-m8 dme-miR-307a-3p X + 18841184 18841273 3'utr Pvf1 FlyBase G47336.1 CGATCCGGTCTGGTCTGATCTGGTCTGGTCTGGGGAACGGTTGTGCTCGTCCTTGGTTGGTTTGCGGTTGGTTCCTGGTGGTGGCTCCCT 31 18841225 0.740815313 17 28 241 0.895833333 1.33243846 0.5625 0.419354839 0.625 31 4 1 43 X:18841184-18841273 7 20 2713 FBgn0030964 2.333333333 0.133333333 0.206666667 8.571428571 150 96.77419355 9 -3 3 0.25 dme-miR-8-3p 7mer-A1 AGTATTA X 18841758 18841764 + X_18841758_18841764_+ 0.822333242 0.681722564 0.752027903 0.099426709 Pvf1 FBtr0343604 18841137 18842901 X + 18841716 18841788 3'utr Pvf1 FlyBase G62738.1 ACTTCTGTTTCTTTTGTGTTTCGTTTTAGATTAAAAATGTCGAGTATTATTCTTAGAGTCCACAAAAAAAAAA 17 18841753 0.988638716 6 17 164 1 1.278753601 0.105263158 0.117647059 0.210526316 17 0 0 19 X:18841716-18841788 7 Pvf1 FBtr0343604 18841137 18842901 AGTATTA 7mer-A1 dme-miR-8-3p X + 18841708 18841765 3'utr Pvf1 FlyBase G47338.1 ATGTTTTTACTTCTGTTTCTTTTGTGTTTCGTTTTAGATTAAAAATGTCGAGTATTAT 5 18841753 0.986884832 3 5 54 1 0.77815125 0 0.2 0.333333333 5 0 0 6 X:18841708-18841765 7 9.5 2714 FBgn0030964 2.333333333 0.133333333 0.206666667 4.071428571 71.25 45.96774194 5 5 5 0.25 dme-miR-2b-2-5p 7mer-A1 TGAAGAA X 18861952 18861958 - X_18861952_18861958_- 0.823266491 0.649131079 0.736198785 0.123132322 CG7326 FBtr0074653|FBtr0333159 18861558|18861195 18862233|18862233 X - 18861935 18862008 3'utr CG7326 FlyBase G68815.1 GAATTAACAGTACGCGGAATTGATAACGCCAAAGACTATTTATTGTTTTGTGAAGAAAATTTTGATTTTATTGC 14 18861947 0.92902097 9 13 112 0.904761905 1.278753601 0.285714286 0.357142857 0.571428571 14 2 0 19 X:18861935-18862008 7 CG7326 FBtr0074653|FBtr0333159 18861558|18861195 18862233|18862233 TGAAGAA 7mer-A1 dme-miR-2b-2-5p X - 18861919 18861958 3'utr CG7326 FlyBase G51765.1 TGAAGAAAATTTTGATTTTATTGCTTGACTCGATCGTTAT 5 18861946 0.988548577 4 4 47 1 0.84509804 0.142857143 0.4 0.571428571 5 0 0 7 X:18861919-18861958 7 4.5 2715 FBgn0030970 277.82 13.14 20.1 0.016197538 0.342465753 0.223880597 -11 -12 -11.5 0.25 dme-miR-14-3p 7mer-A1 AGACTGA X 18879407 18879413 + X_18879407_18879413_+ 0.803841007 0.815661509 0.809751258 0.008358356 CG34401 FBtr0112653|FBtr0333160 18878120|18878120 18880636|18884075 X + 18879390 18879431 3'utr CG34401 FlyBase G62782.1 GTGCGTGTGAGCATTTTAGACTGAGATATCTGCCAACAACAA 81 18879405 0.674951499 9 81 560 1 1.973127854 0.021276596 0.160493827 0.276595745 81 0 0 94 X:18879390-18879431 7 CG34401 FBtr0333160|FBtr0112653 18878120|18878120 18884075|18880636 AGACTGA 7mer-A1 dme-miR-14-3p X + 18879380 18879468 3'utr CG34401 FlyBase G47365.1 GTGTGTGTGTGTGCGTGTGAGCATTTTAGACTGAGATATCTGCCAACAACAACAAATACCGATGCCCACACACAGGCACACACCCACGC 39 18879405 0.977934613 11 37 251 0.965517241 1.447158031 0 0.384615385 0.586206897 39 1 1 56 X:18879380-18879468 7 57.5 2716 FBgn0085430 1429.756667 16.81 26.06 0.040216634 3.420582986 2.206446662 2 2 2 0.25 dme-miR-317-3p 8mer-A1 TGTGTTCA X 18879539 18879546 + X_18879539_18879546_+ 0.57274767 0.622131352 0.597439511 0.034919549 CG34401 FBtr0112653|FBtr0333160 18878120|18878120 18880636|18884075 X + 18879504 18879664 3'utr CG34401 FlyBase G62784.1 GGAAGTTGGAAAAGCTCTGTTTGATTTTTCAAAAATGTGTTCAGTTAAACTAACGTATTTATAGAGATGATCTATCAAATAGTTTTCTACACCGACAGCTATATGAAAAAGAACTCGGACTTTTACATATATGCTTACGATCCCTAGACCTAACTTTAAAT 53 18879539 0.874685887 18 47 447 0.887096774 1.263241435 0.048387097 0.150943396 0.274193548 53 5 2 55 X:18879504-18879664 8 CG34401 FBtr0333160|FBtr0112653 18878120|18878120 18884075|18880636 TGTGTTCA 8mer-A1 dme-miR-317-3p X + 18879506 18879579 3'utr CG34401 FlyBase G47366.1 AAGTTGGAAAAGCTCTGTTTGATTTTTCAAAAATGTGTTCAGTTAAACTAACGTATTTATAGAGATGATCTATC 25 18879539 0.830932442 9 22 227 0.923076923 1.556302501 0.025641026 0.4 0.615384615 25 3 0 36 X:18879506-18879579 8 21 2717 FBgn0085430 1429.756667 16.81 26.06 0.014687814 1.249256395 0.805832694 0 0 0 0.25 dme-miR-11-3p 8mer-m1 CTGTGATG X 18887517 18887524 + X_18887517_18887524_+ 0.462262902 0.462254075 0.462258488 6.22E-06 CG7332 FBtr0342877|FBtr0074647 18887445|18887445 18888860|18887605 X + 18887481 18887547 3'utr CG7332 FlyBase G62800.1 AGGTGTGCCAGAATCGCATGGAACGGCATGGACATACTGTGATGGAGGAAACACTGATGTAAACAGA 46 18887515 0.957914001 7 40 190 0.884615385 1.361727836 0.403846154 0.130434783 0.230769231 46 5 1 46 X:18887481-18887547 8 CG7332 FBtr0342877|FBtr0074647 18887445|18887445 18888860|18887605 CTGTGATG 8mer-m1 dme-miR-11-3p X + 18887495 18887549 3'utr CG7332 FlyBase G47376.1 CGCATGGAACGGCATGGACATACTGTGATGGAGGAAACACTGATGTAAACAGAAG 34 18887511 0.765145744 5 29 136 0.890625 1.755874856 0.59375 0.558823529 0.765625 34 7 0 57 X:18887495-18887549 8 38 2718 FBgn0030973 1168.416667 41.72 64.31666667 0.032522645 0.910834132 0.590826639 2 6 4 0.25 dme-miR-263a-5p 6mer2-7 TGCCAT X 19025639 19025644 + X_19025639_19025644_+ 0.80065558 0.88068433 0.840669955 0.056588836 CG43759 FBtr0331156|FBtr0332994|FBtr0343982 19013347|19013347|19013347 19026872|19028629|19026872 X + 19025614 19025693 3'utr CG43759 FlyBase G62814.1 GGAATACAATACAAAGACTGCCTCATGCCATGCCATCCACTATTACCACCAACCCAACAGCGGCAGCAGCTATAGCAACT 26 19025644 0.964802389 7 24 114 0.878787879 1.462397998 0.060606061 0.192307692 0.363636364 26 4 0 29 X:19025614-19025693 6 CG43759 FBtr0343982|FBtr0332994|FBtr0331156 19013347|19013347|19013347 19026872|19028629|19026872 TGCCAT 6mer2-7 dme-miR-263a-5p X + 19025614 19025719 3'utr CG43759 FlyBase G47384.1 GGAATACAATACAAAGACTGCCTCATGCCATGCCATCCACTATTACCACCAACCCAACAGCGGCAGCAGCTATAGCAACTACAGTAGCCGTCGTCACCATCAGCAT 23 19025644 0.964634068 7 19 103 0.823529412 0.748188027 0.147058824 0.304347826 0.529411765 23 2 4 28 X:19025614-19025719 6 17.5 2719 FBgn0264090 9.64 0.236666667 0.363333333 1.815352697 73.94366197 48.16513761 -5 -5 -5 0.25 dme-miR-283-5p 8mer-m1 TGATATTT X 19028303 19028310 + X_19028303_19028310_+ 0.51751593 0.534867542 0.526191736 0.012269434 CG43759 FBtr0332994 19013347 19028629 X + 19028285 19028323 3'utr CG43759 FlyBase G62823.1 AACAAAAAGCTTAAAATGTGATATTTTATAAAAACTAAT 9 19028297 0.831170776 4 8 79 0.888888889 0.602059991 0 0 0 9 0 1 8 X:19028285-19028323 8 CG43759 FBtr0332994 19013347 19028629 TGATATTT 8mer-m1 dme-miR-283-5p X + 19028288 19028322 3'utr CG43759 FlyBase G47391.1 AAAAAGCTTAAAATGTGATATTTTATAAAAACTAA 7 19028308 0.670984184 4 6 58 0.818181818 0.954242509 0 0.428571429 0.636363636 7 2 0 9 X:19028288-19028322 8 8 2720 FBgn0264090 9.64 0.236666667 0.363333333 0.829875519 33.8028169 22.01834862 6 -5 0.5 0.25 dme-miR-283-5p 7mer-m8 TGATATT X 19136286 19136292 - X_19136286_19136292_- 0.381786403 0.369849677 0.37581804 0.008440522 RhoGAP18B FBtr0299623 19136105 19143584 X - 19136184 19136311 3'utr RhoGAP18B FlyBase G68832.1 TTACATCGTGTATAAGATGTGATATTCGCTGCAAATCGCAAAGCGTGAATATAATTTGTATTTATACCTATATTAATGAACCATATAAAATATACGAATAAAGTCCAATACAGTAGATAGGCTACACA 108 19136287 0.860845719 15 103 806 0.946153846 1.788875116 0.469230769 0.175925926 0.315384615 108 6 1 123 X:19136184-19136311 7 RhoGAP18B FBtr0299623 19136105 19143584 TGATATT 7mer-m8 dme-miR-283-5p X - 19136251 19136309 3'utr RhoGAP18B FlyBase G51775.2 ACATCGTGTATAAGATGTGATATTCGCTGCAAATCGCAAAGCGTGAATATAATTTGTAT 80 19136287 0.725032888 9 77 588 0.968992248 2.096910013 0.472868217 0.45 0.658914729 80 4 0 125 X:19136251-19136309 7 84.5 2721 FBgn0261461 2047.33 61.32666667 94.48 0.041273268 1.377867159 0.894369179 -5 -5 -5 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 19136463 19136468 - X_19136463_19136468_- 0.888798546 0.892501761 0.890650154 0.002618629 RhoGAP18B FBtr0299623 19136105 19143584 X - 19136412 19136509 3'utr RhoGAP18B FlyBase G68834.1 AAATGGGAATTCGCATAGACGAGCCCATCACGAAAATACTTACCAAAAAAGACAGTAGACTAAGTTTATACTAAAGATAATTAGGGGAAACCGCAAGA 289 19136469 0.957733101 11 257 1219 0.887537994 1.766412847 0.285714286 0.131487889 0.237082067 289 33 4 292 X:19136412-19136509 6 RhoGAP18B FBtr0299623 19136105 19143584 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X - 19136412 19136481 3'utr RhoGAP18B FlyBase G51777.1 CACGAAAATACTTACCAAAAAAGACAGTAGACTAAGTTTATACTAAAGATAATTAGGGGAAACCGCAAGA 199 19136469 0.952415018 9 167 757 0.833876221 1.806179974 0.231270358 0.40201005 0.61237785 199 48 3 256 X:19136412-19136481 6 223.5 2722 FBgn0261461 2047.33 61.32666667 94.48 0.109166573 3.644417872 2.365580017 1 1 1 0.25 dme-miR-79-3p 7mer-A1 AGCTTTA X 19136566 19136572 - X_19136566_19136572_- 0.817366143 0.80564631 0.811506227 0.00828715 RhoGAP18B FBtr0299623 19136105 19143584 X - 19136534 19136581 3'utr RhoGAP18B FlyBase G68835.1 TTTGTTGTCAGCTTTAAATGTACGTGTTTTATTGCTAATTTTAATGTT 9 19136568 0.984049746 7 9 92 1 1.230448921 0.058823529 0.444444444 0.705882353 9 0 0 17 X:19136534-19136581 7 RhoGAP18B FBtr0299623 19136105 19143584 AGCTTTA 7mer-A1 dme-miR-79-3p X - 19136533 19136579 3'utr RhoGAP18B FlyBase G51778.1 TGTTGTCAGCTTTAAATGTACGTGTTTTATTGCTAATTTTAATGTTC 7 19136575 0.995096408 5 5 64 0.636363636 0.84509804 0 0.285714286 0.545454545 7 4 0 7 X:19136533-19136579 7 6 2723 FBgn0261461 2047.33 61.32666667 94.48 0.002930646 0.097836721 0.063505504 -4 3 -0.5 0.25 dme-miR-2535b-3p 7mer-m1 CGTGAGT X 1915556 1915562 + X_1915556_1915562_+ 0.765540112 0.716910281 0.741225196 0.034386461 Rbcn-3B FBtr0070316|FBtr0344155 1915333|1915333 1916174|1916825 X + 1915525 1915572 5'utr Rbcn-3B FlyBase G58117.1 GAAAATAAAAGTGCGGTAATGTATGGCGTTTCGTGAGTAGTTAAGGTA 10 1915547 0.939869701 6 9 73 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 X:1915525-1915572 7 Rbcn-3B FBtr0344155|FBtr0070316 1915333|1915333 1916825|1916174 CGTGAGT 7mer-m1 dme-miR-2535b-3p X + 1915535 1915572 5'utr Rbcn-3B FlyBase G43968.1 GTGCGGTAATGTATGGCGTTTCGTGAGTAGTTAAGGTA 5 1915546 0.763833871 4 4 39 1 1 0.1 0.6 0.8 5 0 0 10 X:1915535-1915572 7 6 2724 FBgn0023510 935.05 16.80666667 25.86333333 0.006416769 0.35700119 0.231988658 9 10 9.5 0.25 dme-miR-252-5p 6mer3-8 GTACTT X 19176929 19176934 - X_19176929_19176934_- 0.83416737 0.836746537 0.835456953 0.001823699 CG7556 FBtr0343313 19176107 19177281 X - 19176910 19176968 3'utr CG7556 FlyBase G68880.1 TGTCAGGGATAAAGCCATCGATGATAGATACGGTGTACTTCCAGGTTAGTAACTAATAA 6 19176932 0.985865214 4 6 44 1 0.77815125 0.333333333 0 0 6 0 0 6 X:19176910-19176968 6 CG7556 FBtr0343313 19176107 19177281 GTACTT 6mer3-8 dme-miR-252-5p X - 19176920 19176959 3'utr CG7556 FlyBase G51808.1 TAAAGCCATCGATGATAGATACGGTGTACTTCCAGGTTAG 7 19176938 0.789307022 3 5 42 0.8 0.602059991 0.4 0.285714286 0.5 7 1 1 8 X:19176920-19176959 6 5 2725 FBgn0030990 550.2733333 27.66666667 42.21666667 0.009086393 0.180722892 0.118436636 -2 4 1 0.25 dme-miR-14-3p 6mer3-8 AAGACT X 19177182 19177187 - X_19177182_19177187_- 0.962418802 0.909136563 0.935777682 0.037676205 CG7556 FBtr0074697|FBtr0343313 19176995|19176107 19177281|19177281 X - 19176997 19177204 3'utr CG7556 FlyBase G68881.1 TTTTATACTTTGCATTAAAGACTCTCTGGCATAGCATTTTGGACCTTGCCAATCCTAATCCGCGGCCCGATCCTCTGCCCCTTCCCTGACCTTCTGTTTCCATCACCGTGTGTAGCGCTTATCTTATGTTTTGTACATAATTCTATATTGTAAACATCTAAATGTCGATTAATTCCTTTGCTAAGTAAACGAAATGTAAGAGGAAGTG 139 19177179 0.922892446 35 131 949 0.937888199 2.178976947 0.167701863 0.143884892 0.260869565 139 10 0 151 X:19176997-19177204 6 CG7556 FBtr0074697|FBtr0343313 19176995|19176107 19177281|19177281 AAGACT 6mer3-8 dme-miR-14-3p X - 19177112 19177200 3'utr CG7556 FlyBase G51809.2 ATACTTTGCATTAAAGACTCTCTGGCATAGCATTTTGGACCTTGCCAATCCTAATCCGCGGCCCGATCCTCTGCCCCTTCCCTGACCTT 66 19177179 0.789691898 15 56 404 0.842105263 1.124938737 0.115789474 0.333333333 0.536842105 66 10 5 80 X:19177112-19177200 6 64.5 2726 FBgn0030990 550.2733333 27.66666667 42.21666667 0.117214475 2.331325301 1.52783261 -8 -8 -8 0.25 dme-miR-995-5p 6mer3-8 AATTCG X 19181511 19181516 + X_19181511_19181516_+ 0.696309895 0.764907731 0.730608813 0.04850597 CG7453 FBtr0074666 19181192 19182024 X + 19181221 19181685 3'utr CG7453 FlyBase G62831.1 AAGGGCGGCCACTTCACCGGGTGCTCCAACGCCTCCTCCGGCGCACTCGGATGATTATTAGTTGTTTAAGTTATACACGACTGGACGTGCTTGCATTCAATGCAAGATCGCCGGATCGAAAGCAGAGTGAGAGTAGCGGAGAGCAGAGGAGGCGGTGGGAAAACGAAACGAAACTATGATATTGCTCAGTCAATTAGAGGAGGAGGAGAAAGGGATTCGCTTTGCAGCGTGGCTAGGATACCCTTCCGAGCGGCCAAATTGAATTTAAAGCCAACTGATTTTCAACACTAAATTCGAGTGGACTCTTAAGTTTAAGCATTTGGATTATTGTCAAGCATTTGTTAGCAATCAAAAATTGATACCGGCACTTATATGTACCCTATATATACATATATCTACTTAGGCTGCTGCTGTACATCGAAGGCTGCGGACTCTCAACCATCAACCATCAACATCAACATCAGC 372 19181519 0.977527574 68 357 2353 0.963218391 2.622214023 0.222988506 0.14516129 0.268965517 372 16 0 419 X:19181221-19181685 6 CG7453 FBtr0074666 19181192 19182024 AATTCG 6mer3-8 dme-miR-995-5p X + 19181225 19181670 3'utr CG7453 FlyBase G47396.1 GCGGCCACTTCACCGGGTGCTCCAACGCCTCCTCCGGCGCACTCGGATGATTATTAGTTGTTTAAGTTATACACGACTGGACGTGCTTGCATTCAATGCAAGATCGCCGGATCGAAAGCAGAGTGAGAGTAGCGGAGAGCAGAGGAGGCGGTGGGAAAACGAAACGAAACTATGATATTGCTCAGTCAATTAGAGGAGGAGGAGAAAGGGATTCGCTTTGCAGCGTGGCTAGGATACCCTTCCGAGCGGCCAAATTGAATTTAAAGCCAACTGATTTTCAACACTAAATTCGAGTGGACTCTTAAGTTTAAGCATTTGGATTATTGTCAAGCATTTGTTAGCAATCAAAAATTGATACCGGCACTTATATGTACCCTATATATACATATATCTACTTAGGCTGCTGCTGTACATCGAAGGCTGCGGACTCTCAACCATCAACCATC 247 19181519 0.978740321 64 228 1549 0.930294906 2.06320822 0.222520107 0.380566802 0.589812332 247 24 2 347 X:19181225-19181670 6 67.5 2727 FBgn0030991 1383.076667 90.74333333 138.8333333 0.048804236 0.743856298 0.486194478 -8 -8 -8 0.25 dme-miR-277-3p 7mer-A1 GCATTTA X 19181804 19181810 + X_19181804_19181810_+ 0.79981364 0.775063227 0.787438434 0.017501176 CG7453 FBtr0074666 19181192 19182024 X + 19181706 19181846 3'utr CG7453 FlyBase G62832.1 GCATCCACAATCTAGCCGTAATGTGCCTTACGAACCAGCTCTATATACACCTTTACACATGATATTCTCCATCGCCGGGTCTTCGAGGTGATTTCTTCGCATTTACTTTACGCAACCAAGCAGCAGCACTCACTCAAAAAA 87 19181798 0.878989673 20 72 593 0.831858407 1.672097858 0.17699115 0.218390805 0.398230088 87 18 1 94 X:19181706-19181846 7 CG7453 FBtr0074666 19181192 19182024 GCATTTA 7mer-A1 dme-miR-277-3p X + 19181714 19181814 3'utr CG7453 FlyBase G47397.1 AATCTAGCCGTAATGTGCCTTACGAACCAGCTCTATATACACCTTTACACATGATATTCTCCATCGCCGGGTCTTCGAGGTGATTTCTTCGCATTTACTTT 26 19181798 0.948156797 13 25 194 0.975 1.290034611 0.225 0.384615385 0.6 26 0 1 39 X:19181714-19181814 7 6 2728 FBgn0030991 1383.076667 90.74333333 138.8333333 0.004338154 0.06612056 0.043217287 6 6 6 0.25 dme-miR-1006-3p 6mer2-7 GAATTT X 19195673 19195678 + X_19195673_19195678_+ 0.999955786 0.999289714 0.99962275 0.000471004 CG14194 FBtr0074671|FBtr0336701 19195450|19195450 19196037|19196037 X + 19195652 19195723 3'utr CG14194 FlyBase G62849.1 CGTAGCTTTTAGACTTGTACTGAATTTTAATTGTAAGACAAACGCTAACACCGCCCACGAACCATGTCCAAC 30 19195668 0.99173232 11 25 263 0.828571429 0.985276743 0.085714286 0.1 0.228571429 30 4 2 29 X:19195652-19195723 6 CG14194 FBtr0336701|FBtr0074671 19195450|19195450 19196037|19196037 GAATTT 6mer2-7 dme-miR-1006-3p X + 19195649 19195693 3'utr CG14194 FlyBase G47405.1 CGTCGTAGCTTTTAGACTTGTACTGAATTTTAATTGTAAGACAAA 11 19195668 0.740565461 8 9 95 0.785714286 1.041392685 0.071428571 0.272727273 0.428571429 11 3 0 11 X:19195649-19195693 6 17 2729 FBgn0030996 477.9966667 30.26333333 46.23333333 0.035565102 0.561735874 0.367700072 5 5 5 0.25 dme-miR-190-5p 7mer-m1 CATATCT X 19202690 19202696 - X_19202690_19202696_- 0.677117219 0.567625872 0.622371546 0.077422041 Ulp1 FBtr0074693 19202101 19202871 X - 19202584 19202731 3'utr Ulp1 FlyBase G68895.2 TGGCTGAGACCCCTGCTGGTGCATTAACTTGTTCTCATATCTGATTGTAAAAGAGAATCTATTTCTTCAATAAAATGTCACCAAGTAAAAGCGATGCGAATAAGGATGTATTAATCGCCGAATATCTTCAAGTTTATAATTAATATTT 53 19202703 0.931505506 17 49 429 0.935483871 1.763427994 0.338709677 0.169811321 0.290322581 53 4 0 58 X:19202584-19202731 7 Ulp1 FBtr0074693 19202101 19202871 CATATCT 7mer-m1 dme-miR-190-5p X - 19202684 19202734 3'utr Ulp1 FlyBase G51821.1 AGATGGCTGAGACCCCTGCTGGTGCATTAACTTGTTCTCATATCTGATTGT 19 19202703 0.989708999 7 19 181 1 1.431363764 0.222222222 0.368421053 0.555555556 19 0 0 27 X:19202684-19202734 7 16.5 2730 FBgn0027603 2154.723333 47.38666667 72.81666667 0.007657596 0.348199212 0.226596475 7 7 7 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 19245030 19245036 + X_19245030_19245036_+ 0.818704214 0.821932009 0.820318111 0.002282399 CG7889 FBtr0074675 19244824 19245224 X + 19245016 19245051 3'utr CG7889 FlyBase G62859.1 TTTGTATCTAATTTCCAAAGAATTTGACTTAAGCAG 16 19245028 0.782570765 3 16 133 1 1.230448921 0.235294118 0.0625 0.117647059 16 0 0 17 X:19245016-19245051 7 CG7889 FBtr0074675 19244824 19245224 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X + 19245015 19245052 3'utr CG7889 FlyBase G47411.1 TTTTGTATCTAATTTCCAAAGAATTTGACTTAAGCAGT 11 19245028 0.781801197 3 11 116 1 1.146128036 0.428571429 0.181818182 0.357142857 11 0 0 14 X:19245015-19245052 7 13.5 2731 FBgn0031003 189 15.83 24.33666667 0.071428571 0.852811118 0.554718532 2 2 2 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA X 19252280 19252287 - X_19252280_19252287_- 0.42638555 0.464917472 0.445651511 0.027246168 rictor FBtr0074689|FBtr0343634|FBtr0343635 19252109|19252109|19252109 19252721|19252721|19252721 X - 19252263 19252312 3'utr rictor FlyBase G68918.1 AACCACCGCAATTTATTTAATTAATGTACTTAAAACTAAAAGAGACCCAG 42 19252288 0.978746993 2 41 298 0.980392157 1.397940009 0 0.19047619 0.333333333 42 0 1 50 X:19252263-19252312 8 rictor FBtr0343634|FBtr0343635|FBtr0074689 19252109|19252109|19252109 19252721|19252721|19252721 GTACTTAA 8mer-A1 dme-miR-252-5p X - 19252273 19252300 3'utr rictor FlyBase G51841.1 TTATTTAATTAATGTACTTAAAACTAAA 22 19252288 0.731338914 2 22 170 1 1.51851394 0 0.409090909 0.606060606 22 0 0 33 X:19252273-19252300 8 32 2732 FBgn0031006 604.1266667 11.03 16.89666667 0.052969024 2.901178604 1.893864668 1 1 1 0.25 dme-miR-34-5p 7mer-m8 CACTGCC X 19252673 19252679 - X_19252673_19252679_- 0.679285161 0.697253847 0.688269504 0.012705719 rictor FBtr0074689|FBtr0343634|FBtr0343635 19252109|19252109|19252109 19252721|19252721|19252721 X - 19252639 19252730 stop_codon rictor FlyBase G68921.1 AACTCCTAGACGCACTGGCGGAAGATCAATTGAAGTAGCCCAATGGGGACGCACTGCCTACTCTTACATCTCGTTTACTGGCCGCCCGCCTT 16 19252672 0.95481563 8 15 76 0.947368421 1.255272505 0.105263158 0.1875 0.315789474 16 1 0 18 X:19252639-19252730 7 rictor FBtr0343634|FBtr0343635|FBtr0074689 19252109|19252109|19252109 19252721|19252721|19252721 CACTGCC 7mer-m8 dme-miR-34-5p X - 19252636 19252688 3'utr rictor FlyBase G51844.1 ATGGGGACGCACTGCCTACTCTTACATCTCGTTTACTGGCCGCCCGCCTTCCT 7 19252670 0.966802684 7 7 36 1 0.84509804 0 0 0 7 0 0 7 X:19252636-19252688 7 6 2733 FBgn0031006 604.1266667 11.03 16.89666667 0.009931692 0.543970988 0.355099625 -7 -9 -8 0.25 dme-miR-980-3p 7mer-A1 GCAGCTA X 19271799 19271805 + X_19271799_19271805_+ 0.506837518 0.524578912 0.515708215 0.012545064 Vav FBtr0074678|FBtr0333759|FBtr0113316|FBtr0074677 19271577|19271577|19271577|19271577 19273280|19272089|19272089|19272089 X + 19271770 19271830 3'utr Vav FlyBase G62875.1 CGATGTCGCCAGTCACAGCAACAACAATTGCAGCTAGATCGTAGCCTAGTTAAATGTATAC 213 19271797 0.827167595 5 209 843 0.98015873 2.392696953 0.130952381 0.145539906 0.277777778 213 5 0 247 X:19271770-19271830 7 Vav FBtr0113316|FBtr0074677|FBtr0074678|FBtr0333759 19271577|19271577|19271577|19271577 19272089|19272089|19273280|19272089 GCAGCTA 7mer-A1 dme-miR-980-3p X + 19271759 19271825 3'utr Vav FlyBase G47422.1 GAGGCCGTGGCCGATGTCGCCAGTCACAGCAACAACAATTGCAGCTAGATCGTAGCCTAGTTAAATG 138 19271797 0.932630892 3 135 504 0.982758621 2.357934847 0.163793103 0.463768116 0.681034483 138 4 0 228 X:19271759-19271825 7 174.5 2734 FBgn0040068 329.8133333 9.073333333 13.89 0.52908716 19.23218222 12.56299496 2 2 2 0.25 dme-miR-263a-5p 6mer3-8 GTGCCA X 19271941 19271946 + X_19271941_19271946_+ 0.961106693 0.9634001 0.962253396 0.001621679 Vav FBtr0074678|FBtr0333759|FBtr0113316|FBtr0074677 19271577|19271577|19271577|19271577 19273280|19272089|19272089|19272089 X + 19271916 19271963 3'utr Vav FlyBase G62876.1 TTTGCGTCGTCTGCTCGAAACATTTGTGCCAATCACCGGAAAATTACA 6 19271939 0.957373768 5 6 33 1 0.954242509 0 0.5 0.666666667 6 0 0 9 X:19271916-19271963 6 Vav FBtr0113316|FBtr0074677|FBtr0074678|FBtr0333759 19271577|19271577|19271577|19271577 19272089|19272089|19273280|19272089 GTGCCA 6mer3-8 dme-miR-263a-5p X + 19271918 19271960 3'utr Vav FlyBase G47423.1 TGCGTCGTCTGCTCGAAACATTTGTGCCAATCACCGGAAAATT 5 19271948 0.956761419 3 5 30 1 0.84509804 0 0.2 0.428571429 5 0 0 7 X:19271918-19271960 6 5.5 2735 FBgn0040068 329.8133333 9.073333333 13.89 0.0166761 0.606171932 0.395968323 2 -7 -2.5 0.25 dme-miR-252-5p 6mer3-8 GTACTT X 19272255 19272260 + X_19272255_19272260_+ 0.994455684 0.826770855 0.91061327 0.118571059 Vav FBtr0074678 19271577 19273280 X + 19272250 19272310 3'utr Vav FlyBase G62877.1 TTATTGTACTTGTACTGGTAGATATTTAACCCTAGTTGAAACGCAAATGTTAACATAACGA 10 19272259 0.995386593 6 7 95 0.538461538 0.84509804 0.076923077 0.1 0.307692308 10 6 0 7 X:19272250-19272310 6 Vav FBtr0074678 19271577 19273280 GTACTT 6mer3-8 dme-miR-252-5p X + 19272252 19272287 3'utr Vav FlyBase G47424.1 ATTGTACTTGTACTGGTAGATATTTAACCCTAGTTG 5 19272261 0.958274403 4 5 52 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 X:19272252-19272287 6 5.5 2736 FBgn0040068 329.8133333 9.073333333 13.89 0.0166761 0.606171932 0.395968323 -4 -6 -5 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 19272508 19272513 + X_19272508_19272513_+ 0.999520034 0.579868936 0.789694485 0.296738139 Vav FBtr0074678 19271577 19273280 X + 19272451 19272563 3'utr Vav FlyBase G62879.1 TATAGATATCTATACCTATAACTATAACTATACCTAATAACTATAACTAACTATAATGTACCTATTTATATAGCCAACGAATCACCTTGCGAACTTGATGGATGATGAGTCGA 14 19272507 0.982620591 8 14 105 1 1.204119983 0.125 0.142857143 0.25 14 0 0 16 X:19272451-19272563 6 Vav FBtr0074678 19271577 19273280 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X + 19272482 19272524 3'utr Vav FlyBase G47425.1 ACCTAATAACTATAACTAACTATAATGTACCTATTTATATAGC 5 19272507 0.984288311 2 5 51 1 0.698970004 0 0 0 5 0 0 5 X:19272482-19272524 6 6 2737 FBgn0040068 329.8133333 9.073333333 13.89 0.018192109 0.661278472 0.431965443 1 1 1 0.25 dme-miR-980-3p 7mer-m8 GGCAGCT X 19273140 19273146 + X_19273140_19273146_+ 0.658145946 0.658999475 0.65857271 0.000603586 Vav FBtr0074678 19271577 19273280 X + 19273108 19273165 3'utr Vav FlyBase G62880.1 CGCTCGCCTGCTGTCCCTTTCCCTTTCGCATCGGCAGCTCCAAAATTATTGTTAAGTA 15 19273138 0.892096526 5 14 132 0.933333333 1.146128036 0 0 0 15 1 0 14 X:19273108-19273165 7 Vav FBtr0074678 19271577 19273280 GGCAGCT 7mer-m8 dme-miR-980-3p X + 19273117 19273164 3'utr Vav FlyBase G47426.1 GCTGTCCCTTTCCCTTTCGCATCGGCAGCTCCAAAATTATTGTTAAGT 13 19273137 0.795250234 8 12 102 0.952380952 1.301029996 0 0.307692308 0.571428571 13 1 0 20 X:19273117-19273164 7 12.5 2738 FBgn0040068 329.8133333 9.073333333 13.89 0.037900226 1.377663483 0.899928006 2 3 2.5 0.25 dme-miR-14-3p 7mer-A1 AGACTGA X 19485920 19485926 - X_19485920_19485926_- 0.610864025 0.635621974 0.623243 0.01750655 pcm FBtr0302082|FBtr0074784 19485757|19485878 19486102|19486102 X - 19485901 19485952 3'utr pcm FlyBase G69024.1 TTGCGGATTATGTGAATACTAAAATGAGACTGACTCGTCTTTATATTTTTTC 220 19485928 0.932390553 8 214 1370 0.98467433 2.409933123 0.340996169 0.154545455 0.287356322 220 4 0 257 X:19485901-19485952 7 pcm FBtr0302082|FBtr0074784 19485757|19485878 19486102|19486102 AGACTGA 7mer-A1 dme-miR-14-3p X - 19485880 19485960 3'utr pcm FlyBase G51910.1 TTTTAGAGTTGCGGATTATGTGAATACTAAAATGAGACTGACTCGTCTTTATATTTTTTCAATAAACTGGACTTTACCCAT 122 19485928 0.922353502 11 118 715 0.963190184 2.195899652 0.306748466 0.303278689 0.478527607 122 6 0 157 X:19485880-19485960 7 154.5 2739 FBgn0020261 395.3566667 9.006666667 13.76666667 0.390786379 17.15396003 11.22276029 2 2 2 0.25 dme-miR-980-3p 6mer3-8 GGCAGC X 19493374 19493379 - X_19493374_19493379_- 0.969987772 0.959072673 0.964530222 0.007718141 CG12204 FBtr0074783 19493290 19493407 X - 19493341 19493393 3'utr CG12204 FlyBase G69031.1 GTGCCGCTTCCATTGGCAGCGAAACTGGTGGCCATTACATGGTGCTGTGGTCA 7 19493380 0.967141724 4 7 42 1 0.954242509 0.666666667 0.285714286 0.444444444 7 0 0 9 X:19493341-19493393 6 CG12204 FBtr0074783 19493290 19493407 GGCAGC 6mer3-8 dme-miR-980-3p X - 19493357 19493401 3'utr CG12204 FlyBase G51915.2 ATGTGATGGTGCCGCTTCCATTGGCAGCGAAACTGGTGGCCATTA 8 19493381 0.810611491 2 7 39 0.9375 0.875061263 0.5625 0.375 0.6875 8 0 1 15 X:19493357-19493401 6 6 2740 FBgn0031022 64 7.23 11.12666667 0.09375 0.829875519 0.539245057 1 2 1.5 0.25 dme-miR-308-3p 7mer-m1 TGTGATT X 19508833 19508839 + X_19508833_19508839_+ 0.520621456 0.518311349 0.519466403 0.001633558 Pfrx FBtr0074713|FBtr0074717|FBtr0074715|FBtr0307193|FBtr0074716|FBtr0074714|FBtr0074720|FBtr0307194|FBtr0339439|FBtr0339440|FBtr0074718|FBtr0307192|FBtr0074719 19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526 19509350|19509350|19509350|19509350|19508902|19509350|19509350|19509350|19509350|19509350|19509350|19509350|19509350 X + 19508723 19508869 3'utr Pfrx FlyBase G62900.1 AGACACGGACGTGGTCATGCGAGGGCAACACTGACAACTGCTCCTGCACCTGCTCCAAGGATGTGGTGGCATCTCTACTTAACGTGGCGTCGAAGGACTGCGTATGAAATTGTGATTGATCCATTGTGCTGTTTTATTATGTACTTT 182 19508832 0.988207279 16 177 1612 0.964912281 1.643452676 0.057017544 0.203296703 0.364035088 182 4 4 220 X:19508723-19508869 7 Pfrx FBtr0074714|FBtr0074716|FBtr0074719|FBtr0339440|FBtr0307194|FBtr0074718|FBtr0339439|FBtr0307192|FBtr0074720|FBtr0074713|FBtr0074717|FBtr0074715|FBtr0307193 19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526|19508526 19509350|19508902|19509350|19509350|19509350|19509350|19509350|19509350|19509350|19509350|19509350|19509350|19509350 TGTGATT 7mer-m1 dme-miR-308-3p X + 19508773 19508873 3'utr Pfrx FlyBase G47437.1 TGCTCCAAGGATGTGGTGGCATCTCTACTTAACGTGGCGTCGAAGGACTGCGTATGAAATTGTGATTGATCCATTGTGCTGTTTTATTATGTACTTTAATG 122 19508832 0.965571548 18 117 1095 0.957894737 1.561101384 0.068421053 0.409836066 0.621052632 122 4 4 182 X:19508773-19508873 7 125.5 2741 FBgn0027621 67 2.486666667 3.756666667 1.873134328 50.4691689 33.40727595 1 1 1 0.25 dme-miR-33-5p 7mer-A1 AATGCAA X 19518469 19518475 - X_19518469_19518475_- 0.721437571 0.676755733 0.699096652 0.031594874 l(1)G0156 FBtr0307904 19518426 19519286 X - 19518436 19518516 3'utr l(1)G0156 FlyBase G69036.1 ATGAAATGAAGGCAATTGTTATTAATAGTTAAGCGAATTGTAATGCAAAGTCATCATGCAATTGTTAAAACTCAATAAAGG 30 19518478 0.98233379 8 29 221 0.914285714 1.505149978 0.057142857 0.133333333 0.257142857 30 3 0 32 X:19518436-19518516 7 l(1)G0156 FBtr0307904 19518426 19519286 AATGCAA 7mer-A1 dme-miR-33-5p X - 19518453 19518527 3'utr l(1)G0156 FlyBase G51919.1 ATACAAATGCTATGAAATGAAGGCAATTGTTATTAATAGTTAAGCGAATTGTAATGCAAAGTCATCATGCAATTG 17 19518478 0.986283148 6 15 130 0.956521739 1.342422681 0.173913043 0.294117647 0.47826087 17 1 0 22 X:19518453-19518527 7 19.5 2742 FBgn0027291 1766.01 106.06 162.5666667 0.01104184 0.183858193 0.119950789 3 3 3 0.25 dme-miR-304-5p 7mer-A1 GAGATTA X 19529975 19529981 + X_19529975_19529981_+ 0.797774843 0.759126061 0.778450452 0.027328758 CoRest FBtr0302864|FBtr0307903|FBtr0302862|FBtr0302863 19529756|19529756|19529756|19529756 19530896|19530896|19530896|19530896 X + 19529941 19530015 3'utr CoRest FlyBase G62931.1 AAAAGAAAGCATCACGGCTTTATCTAGGCTTGTAGAGATTAGTTCGTTTGTATTTGAGGTAACCTTGAGACAGTT 14 19529971 0.987418659 7 14 123 1 1.204119983 0.1875 0.142857143 0.25 14 0 0 16 X:19529941-19530015 7 CoRest FBtr0302862|FBtr0302863|FBtr0302864|FBtr0307903 19529756|19529756|19529756|19529756 19530896|19530896|19530896|19530896 GAGATTA 7mer-A1 dme-miR-304-5p X + 19529900 19530016 3'utr CoRest FlyBase G47462.1 TTCTCTTAATTGTCTTTAAACTTGGGACGCATTTATCGTAAAAAAGAAAGCATCACGGCTTTATCTAGGCTTGTAGAGATTAGTTCGTTTGTATTTGAGGTAACCTTGAGACAGTTC 21 19529971 0.986639322 12 20 173 0.941176471 1.505149978 0.117647059 0.428571429 0.647058824 21 2 0 32 X:19529900-19530016 7 10 2743 FBgn0261573 1764.736667 66.82333333 102.5833333 0.005666568 0.149648326 0.097481722 4 4 4 0.25 dme-miR-283-5p 8mer-A1 TGATATTA X 19570999 19571006 - X_19570999_19571006_- 0.587028263 0.591768927 0.589398595 0.00335211 Tao FBtr0304000|FBtr0303999 19570645|19569719 19571580|19571580 X - 19570967 19571018 5'utr Tao FlyBase G69059.1 TAAAGTCTAATTTGATATTATTACCGGATAACTGAATCAATCACACAATTTT 8 19571007 0.995075438 3 6 73 0.8 0.903089987 0.4 0.25 0.4 8 2 0 8 X:19570967-19571018 8 Tao FBtr0304000|FBtr0303999 19570645|19569719 19571580|19571580 TGATATTA 8mer-A1 dme-miR-283-5p X - 19570974 19571030 5'utr Tao FlyBase G51935.1 AAGTGTTTAAATTAAAGTCTAATTTGATATTATTACCGGATAACTGAATCAATCACA 8 19571007 0.983233516 4 7 72 1 1.146128036 0.142857143 0.625 0.785714286 8 0 0 14 X:19570974-19571030 8 6.5 2744 FBgn0031030 4262.23 160.5366667 246.0233333 0.001525023 0.040489193 0.026420258 1 1 1 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG X 19615481 19615486 + X_19615481_19615486_+ 0.999679641 0.99943497 0.999557306 0.000172958 Shawn FBtr0074739|FBtr0344069|FBtr0074738|FBtr0074737 19615415|19615415|19615415|19615415 19615617|19615617|19615596|19615617 X + 19615419 19615512 3'utr Shawn FlyBase G62963.1 GCGCTCCCAATGCGGTGACCACAGCATGTCGACGTGAATCTTTGTACATATGTAGATTAATGCCAAAGTTGCCAGGAAATCGGTGGGCAGGTGG 18 19615479 0.969877113 6 16 96 0.947368421 1.255272505 0.473684211 0.055555556 0.105263158 18 1 0 18 X:19615419-19615512 6 Shawn FBtr0074737|FBtr0074738|FBtr0344069|FBtr0074739 19615415|19615415|19615415|19615415 19615617|19615596|19615617|19615617 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" X + 19615462 19615501 3'utr Shawn FlyBase G47491.1 GTACATATGTAGATTAATGCCAAAGTTGCCAGGAAATCGG 11 19615479 0.721593854 5 9 59 0.866666667 1.113943352 0.466666667 0.363636364 0.533333333 11 2 0 13 X:19615462-19615501 6 12.5 2745 FBgn0031039 175.68 13.25333333 20.26333333 0.071152095 0.943158954 0.616877776 2 2 2 0.25 dme-miR-2535b-3p 6mer3-8 CCGTGA X 19622029 19622034 - X_19622029_19622034_- 0.940081478 0.956800471 0.948440974 0.011822118 NAA20 FBtr0332483|FBtr0332484|FBtr0074763 19621449|19621449|19621449 19622172|19622172|19622172 X - 19622011 19622047 5'utr NAA20 FlyBase G69082.1 ATAACCCATAATCCCGTGATCTGCCCGGTGATAACAT 32 19622027 0.718237669 4 32 165 1 1.579783597 0 0.125 0.263157895 32 0 0 38 X:19622011-19622047 6 NAA20 FBtr0074763|FBtr0332484|FBtr0332483 19621449|19621449|19621449 19622172|19622172|19622172 CCGTGA 6mer3-8 dme-miR-2535b-3p X - 19622012 19622047 5'utr NAA20 FlyBase G51951.1 ATAACCCATAATCCCGTGATCTGCCCGGTGATAACA 21 19622026 0.765807665 4 20 93 1 1.556302501 0 0.523809524 0.722222222 21 0 0 36 X:19622012-19622047 6 25.5 2746 FBgn0031043 449.0266667 46.18333333 70.71 0.0567895 0.552147239 0.360627917 -7 -8 -7.5 0.25 dme-miR-283-5p 7mer-m1 GATATTT X 19625414 19625420 + X_19625414_19625420_+ 0.757161425 0.710945987 0.734053706 0.032679223 MKP-4 FBtr0074741 19624630 19625729 X + 19625390 19625428 3'utr MKP-4 FlyBase G62973.1 CACACAAACTATGAATGTATTTTAGATATTTAAACCTTT 9 19625411 0.83348416 5 8 89 1 1 0 0.111111111 0.2 9 0 0 10 X:19625390-19625428 7 MKP-4 FBtr0074741 19624630 19625729 GATATTT 7mer-m1 dme-miR-283-5p X + 19625389 19625418 3'utr MKP-4 FlyBase G47503.1 ACACACAAACTATGAATGTATTTTAGATAT 5 19625411 0.893212536 2 5 41 1 1 0.1 0.8 0.9 5 0 0 10 X:19625389-19625418 5 6.5 2747 FBgn0031044 267.6933333 13.86333333 21.32666667 0.024281516 0.468862707 0.304782745 3 3 3 0.25 dme-miR-970-3p 7mer-m8 TCTTATG X 19626599 19626605 - X_19626599_19626605_- 0.612428301 0.405234967 0.508831634 0.146507787 e(y)3 FBtr0334278 19626546 19628098 X - 19626560 19626617 3'utr e(y)3 FlyBase G69087.1 AAGTGGAATTATTCTTATGTATACATACTGAAAGATTTATTTTTAAGTCGAATAAAAC 20 19626606 0.849427319 6 19 185 1 1.477121255 0.033333333 0.25 0.5 20 0 0 30 X:19626560-19626617 7 e(y)3 FBtr0334278 19626546 19628098 TCTTATG 7mer-m8 dme-miR-970-3p X - 19626566 19626653 3'utr e(y)3 FlyBase G51954.1 CTTTATGCGAAAAGTAAATCTTAAGTCCTTCATATTAAGTGGAATTATTCTTATGTATACATACTGAAAGATTTATTTTTAAGTCGAA 12 19626581 0.98775482 9 11 99 0.947368421 1.255272505 0.105263158 0.416666667 0.631578947 12 1 0 18 X:19626566-19626653 7 11.5 2748 FBgn0087008 1841.593333 29.13666667 44.69333333 0.006244593 0.394691683 0.257309069 1 -24 -11.5 0.25 dme-miR-305-3p 6mer3-8 ATGTGC X 19627148 19627153 - X_19627148_19627153_- 0.997719941 0.999724218 0.998722079 0.001417254 e(y)3 FBtr0334278 19626546 19628098 X - 19627067 19627172 3'utr e(y)3 FlyBase G69091.1 CAGCCTAAGTAGTGTCTTCATGTGCGGTAGCTGCTTGTCCTTTTTTTTTTCGATTCGTTTAGTTTAGATTCGGTAGATTCGTAAGCGGGGTAGGGACTTGGCTCGG 34 19627151 0.98567455 12 30 290 0.897435897 1.544068044 0.179487179 0.088235294 0.205128205 34 4 0 35 X:19627067-19627172 6 e(y)3 FBtr0334278 19626546 19628098 ATGTGC 6mer3-8 dme-miR-305-3p X - 19627126 19627216 3'utr e(y)3 FlyBase G51957.1 ATTTATAAGAACCACGCCCTCTAGCCCATGTAAGTAGTTAAGCACAGCCTAAGTAGTGTCTTCATGTGCGGTAGCTGCTTGTCCTTTTTTT 19 19627141 0.980642167 7 19 140 1 1.491361694 0.451612903 0.368421053 0.612903226 19 0 0 31 X:19627126-19627216 6 18 2749 FBgn0087008 1841.593333 29.13666667 44.69333333 0.009774145 0.617778286 0.40274463 -2 -12 -7 0.25 dme-miR-14-3p 6mer3-8 AAGACT X 19627662 19627667 - X_19627662_19627667_- 0.633424043 0.835747617 0.73458583 0.14306439 e(y)3 FBtr0334278 19626546 19628098 X - 19627598 19627693 3'utr e(y)3 FlyBase G69094.1 AACACCAAGTAGACCACGTTATGCTTAAGACTTTTTTAACGCCTAAGTTGAATAGCCTAGCACTAAGTCACAACTTCATTTGTTTCTAGTGAATTC 28 19627660 0.98952807 10 25 244 0.852941176 1.462397998 0.235294118 0.178571429 0.323529412 28 5 0 29 X:19627598-19627693 6 e(y)3 FBtr0334278 19626546 19628098 AAGACT 6mer3-8 dme-miR-14-3p X - 19627637 19627690 3'utr e(y)3 FlyBase G51961.1 ACCAAGTAGACCACGTTATGCTTAAGACTTTTTTAACGCCTAAGTTGAATAGCC 17 19627660 0.9905921 4 15 152 0.92 1.361727836 0.04 0.352941176 0.56 17 2 0 23 X:19627637-19627690 6 20.5 2750 FBgn0087008 1841.593333 29.13666667 44.69333333 0.011131665 0.703580826 0.458681384 -7 -7 -7 0.25 dme-miR-305-3p 7mer-m1 TGTGCCG X 19641392 19641398 - X_19641392_19641398_- 0.717034075 0.687572181 0.702303128 0.020832709 CG12237 FBtr0074761 19641189 19641776 X - 19641374 19641409 3'utr CG12237 FlyBase G69125.1 ATTTATATCTGTGTGCCGGGACTTTACCTGCAAAAC 20 19641396 0.827919462 5 20 160 1 1.397940009 0.12 0.25 0.4 20 0 0 25 X:19641374-19641409 7 CG12237 FBtr0074761 19641189 19641776 TGTGCCG 7mer-m1 dme-miR-305-3p X - 19641377 19641409 3'utr CG12237 FlyBase G51983.2 ATTTATATCTGTGTGCCGGGACTTTACCTGCAA 24 19641397 0.833313328 7 22 173 0.965517241 1.447158031 0.068965517 0.208333333 0.344827586 24 1 0 28 X:19641377-19641409 7 20.5 2751 FBgn0031048 357.4333333 25.82 39.46333333 0.057353353 0.793958172 0.51946955 -2 -1 -1.5 0.25 dme-miR-7-5p 6mer3-8 GTCTTC X 19644330 19644335 + X_19644330_19644335_+ 0.512076273 0.760700529 0.636388401 0.175803858 Sec61gamma FBtr0340610 19644092 19644518 X + 19644255 19644409 3'utr Sec61gamma FlyBase G62988.1 ACGTATTGTAATGTTTCGATATTCCATTCATGAACAAGTTAGTTAATAAGATTCAAATGTAAAAAGGAATCACCCGTCTTCATAGCATTTGTTTGGGGTGCGCATCCCCGCTAATAAATGTTAAATTGATTTTCCGTGTACAAATGAGATTCTTT 28 19644334 0.977875513 13 26 180 0.9375 1.477121255 0.1875 0.107142857 0.21875 28 2 0 30 X:19644255-19644409 6 Sec61gamma FBtr0074745|FBtr0344986|FBtr0340610 19644092|19644092|19644092 19644395|19644395|19644518 GTCTTC 6mer3-8 dme-miR-7-5p X + 19644309 19644364 3'utr Sec61gamma FlyBase G47521.1 AAATGTAAAAAGGAATCACCCGTCTTCATAGCATTTGTTTGGGGTGCGCATCCCCG 10 19644335 0.968631695 5 8 53 0.909090909 1 0.181818182 0.1 0.181818182 10 1 0 10 X:19644309-19644364 6 12 2752 FBgn0031049 488 95.01 145.01 0.024590164 0.126302494 0.082752914 -4 -5 -4.5 0.25 dme-miR-965-3p 8mer-A1 TACGCTTA X 19646812 19646819 - X_19646812_19646819_- 0.45718191 0.618664607 0.537923258 0.114185512 Ranbp21 FBtr0340614|FBtr0074759 19646304|19646587 19647574|19647574 X - 19646783 19646836 3'utr Ranbp21 FlyBase G69132.1 AGGAATATTTCTGAAATTACGCTTAGGTTTAGTTGATAGGCAAAAGTTATTATT 45 19646820 0.864449139 8 37 452 0.826923077 1.031408464 0.038461538 0.133333333 0.25 45 6 3 43 X:19646783-19646836 8 Ranbp21 FBtr0074759|FBtr0340614 19646587|19646304 19647574|19647574 TACGCTTA 8mer-A1 dme-miR-965-3p X - 19646790 19646842 3'utr Ranbp21 FlyBase G51991.1 ATTTGAAGGAATATTTCTGAAATTACGCTTAGGTTTAGTTGATAGGCAAAAGT 20 19646820 0.943693021 8 17 174 0.903225806 1.447158031 0.129032258 0.4 0.612903226 20 3 0 28 X:19646790-19646842 8 29.5 2753 FBgn0031051 883.0066667 17.98 27.40666667 0.033408581 1.640711902 1.076380443 1 1 1 0.25 dme-miR-980-3p 7mer-m8 GGCAGCT X 19676314 19676320 - X_19676314_19676320_- 0.654602242 0.64473906 0.649670651 0.006974265 dome FBtr0074756 19676059 19676538 X - 19676265 19676454 3'utr dome FlyBase G69149.1 CTTCAGCCGCATATCCTTCCAACGCCATGATCTGGTCACCGGATCGCCCCAGCAACCAAAATCCAGGACGAGGAACCCAGAACCCAGAACCTGTAAACTAGAATCTGGAATCTGGAAACTAGAAACCACTGTCGGGCAGCTGTTTATAGTAATTAGTGAAAACTCCTCGGACGAATGTAGTTTTACGTTT 138 19676311 0.979771602 26 126 868 0.905660377 1.857332496 0.100628931 0.123188406 0.238993711 138 14 1 144 X:19676265-19676454 7 dome FBtr0074756 19676059 19676538 GGCAGCT 7mer-m8 dme-miR-980-3p X - 19676264 19676339 3'utr dome FlyBase G52002.1 AAACTAGAAACCACTGTCGGGCAGCTGTTTATAGTAATTAGTGAAAACTCCTCGGACGAATGTAGTTTTACGTTTG 58 19676311 0.751639616 10 53 404 0.896551724 1.892094603 0.068965517 0.344827586 0.563218391 58 9 0 78 X:19676264-19676339 7 70.5 2754 FBgn0043903 649.3333333 16.12333333 24.73333333 0.108572895 4.372544966 2.850404313 -9 -9 -9 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG X 19686435 19686441 + X_19686435_19686441_+ 0.657238633 0.65091278 0.654075706 0.004473016 Ubqn FBtr0074750|FBtr0340612 19686065|19686065 19687240|19687658 X + 19686344 19686472 3'utr Ubqn FlyBase G63041.1 AACGAGCATAGTTGCCTCGAGATCGGAGAGATACTAGATATAGGTGGGTGATATGAATGACGCCGGTGAGAATGTTAGATAGGGATCGCATACCAAAGTGTTAGCACTTTCGTAGTTGATATCAGATTT 50 19686434 0.97752748 13 48 315 0.965517241 1.748188027 0.24137931 0.12 0.24137931 50 2 0 56 X:19686344-19686472 7 Ubqn FBtr0074750|FBtr0340612 19686065|19686065 19687240|19687658 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 19686353 19686460 3'utr Ubqn FlyBase G47549.1 AGTTGCCTCGAGATCGGAGAGATACTAGATATAGGTGGGTGATATGAATGACGCCGGTGAGAATGTTAGATAGGGATCGCATACCAAAGTGTTAGCACTTTCGTAGTT 40 19686442 0.962332356 13 36 226 0.916666667 1.439332694 0.166666667 0.375 0.583333333 40 4 1 55 X:19686353-19686460 7 25 2755 FBgn0031057 2464.196667 86.81666667 133.1533333 0.010145294 0.287963141 0.187753467 1 -7 -3 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 19694392 19694398 - X_19694392_19694398_- 0.779359271 0.776263561 0.777811416 0.00218899 CG14229 FBtr0335023|FBtr0335023|FBtr0335023|FBtr0074753|FBtr0074753|FBtr0074753|FBtr0344968|FBtr0344968|FBtr0344968 19693975|19693975|19693975|19694196|19694196|19694196|19694196|19694196|19694196 19694566|19694566|19694566|19694566|19694566|19694566|19694566|19694566|19694566 X - 19694348 19694462 3'utr CG14229 FlyBase G69165.1 CGCCTCCGTTCAGTCTTCTCTGCGCACGGATTCGGATATCCGTGTCTGGAGTCACTTGCGTTTGTGTGATAAGCATTGTTTACTTGCATGGCATTAGCATCACCCCTGATGCATA 74 19694400 0.718083136 18 69 579 0.939759036 1.591064607 0.13253012 0.121621622 0.21686747 74 4 1 78 X:19694348-19694462 7 CG14229 FBtr0344968|FBtr0344968|FBtr0344968|FBtr0074753|FBtr0074753|FBtr0074753|FBtr0335023|FBtr0335023|FBtr0335023 19694196|19694196|19694196|19694196|19694196|19694196|19693975|19693975|19693975 19694566|19694566|19694566|19694566|19694566|19694566|19694566|19694566|19694566 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 19694354 19694426 3'utr CG14229 FlyBase G52014.1 TATCCGTGTCTGGAGTCACTTGCGTTTGTGTGATAAGCATTGTTTACTTGCATGGCATTAGCATCACCCCTGA 42 19694400 0.896901871 9 35 332 0.861538462 1.748188027 0.092307692 0.333333333 0.569230769 42 9 0 56 X:19694354-19694426 7 37 2756 FBgn0031059 134 20.55333333 31.35333333 0.276119403 1.800194616 1.18009781 2 2 2 0.25 dme-miR-8-3p 6mer2-7 AGTATT X 19699536 19699541 + X_19699536_19699541_+ 0.998504147 0.99287599 0.995690069 0.003979668 Cdc42 FBtr0309215|FBtr0309214 19698593|19698593 19699938|19699938 X + 19699287 19699658 3'utr Cdc42 FlyBase G63061.1 AAAAACAATCCAGAACAGAACAGAATGTGGGGCGATTCGAAAAGAACCATGCACTTATTCGTTTTGCCTCAGTCGATGAAATCCGCGGGAATCCACGTCGATATTGTCCCGAAAGGAGCAACGTGCGAGAATTATATTAAATATTTATGATAACTGATCGCGTAATGTTTAAACAGCGGAGGTCGGATGGAATTCGCTAGCATGCAGATATGAAAGTGAAGCTTATTATGTAATAAAACTAAGCGTATGAGTATTGAAATATGATTAAAAGTAAATTAAATGAACCTAAAGGAGGAGATAAAGGATCAGCAAGAGATGCGAGAACCGAACTAGGCGTTGCAACCACAACACAAACACACATCTGAAATCTAC 81 19699534 0.965086363 37 76 399 0.951456311 1.69019608 0.213592233 0.222222222 0.388349515 81 4 1 98 X:19699287-19699658 6 Cdc42 FBtr0309214|FBtr0309215 19698593|19698593 19699938|19699938 AGTATT 6mer2-7 dme-miR-8-3p X + 19699424 19699657 3'utr Cdc42 FlyBase G47561.1 TAAATATTTATGATAACTGATCGCGTAATGTTTAAACAGCGGAGGTCGGATGGAATTCGCTAGCATGCAGATATGAAAGTGAAGCTTATTATGTAATAAAACTAAGCGTATGAGTATTGAAATATGATTAAAAGTAAATTAAATGAACCTAAAGGAGGAGATAAAGGATCAGCAAGAGATGCGAGAACCGAACTAGGCGTTGCAACCACAACACAAACACACATCTGAAATCTA 42 19699534 0.965544632 22 39 211 0.93220339 1.263241435 0.220338983 0.333333333 0.525423729 42 2 2 55 X:19699424-19699657 6 15.5 2757 FBgn0010341 5859.21 357.3733333 549.4666667 0.002645408 0.043372011 0.028209173 2 2 2 0.25 dme-miR-277-3p 7mer-m8 TGCATTT X 19699819 19699825 + X_19699819_19699825_+ 0.574448472 0.52785841 0.551153441 0.032944176 Cdc42 FBtr0309215|FBtr0309214 19698593|19698593 19699938|19699938 X + 19699784 19699841 3'utr Cdc42 FlyBase G63062.1 AAAACGACAAAAGATGAAAGGAAAATAAGAACTAATGCATTTTTTAATATTTTTATAT 25 19699809 0.968571233 6 24 147 0.931034483 1.431363764 0.068965517 0.12 0.24137931 25 2 0 27 X:19699784-19699841 7 Cdc42 FBtr0309214|FBtr0309215 19698593|19698593 19699938|19699938 TGCATTT 7mer-m8 dme-miR-277-3p X + 19699799 19699842 3'utr Cdc42 FlyBase G47562.1 GAAAGGAAAATAAGAACTAATGCATTTTTTAATATTTTTATATG 16 19699809 0.954251777 6 15 81 1 1.380211242 0.166666667 0.4375 0.625 16 0 0 24 X:19699799-19699842 7 18.5 2758 FBgn0010341 5859.21 357.3733333 549.4666667 0.003157422 0.051766593 0.033669012 10 10 10 0.25 dme-miR-308-3p 7mer-m1 TGTGATT X 19741426 19741432 - X_19741426_19741432_- 0.5143076 0.519267554 0.516787577 0.00350725 CG18809 FBtr0331746|FBtr0331747|FBtr0074811|FBtr0074810 19741222|19741222|19741222|19741222 19741779|19741779|19741779|19741779 X - 19741401 19741454 3'utr CG18809 FlyBase G69186.1 CGCAAACTGAAGAACTAACCATTGTGATTTATATATCTATCTCTTCCTTCCCGT 14 19741433 0.983668026 5 14 110 1 1.255272505 0 0.285714286 0.444444444 14 0 0 18 X:19741401-19741454 7 CG18809 FBtr0074810|FBtr0074811|FBtr0331747|FBtr0331746 19741222|19741222|19741222|19741222 19741779|19741779|19741779|19741779 TGTGATT 7mer-m1 dme-miR-308-3p X - 19741399 19741450 3'utr CG18809 FlyBase G52035.1 AACTGAAGAACTAACCATTGTGATTTATATATCTATCTCTTCCTTCCCGTTT 7 19741433 0.989581504 3 7 68 1 0.954242509 0.222222222 0.142857143 0.333333333 7 0 0 9 X:19741399-19741450 7 10 2759 FBgn0042132 250.6633333 14.18333333 21.89333333 0.039894148 0.705052879 0.456760049 1 1 1 0.25 dme-miR-308-3p 7mer-m1 TGTGATT X 19758906 19758912 + X_19758906_19758912_+ 0.520803713 0.520873879 0.520838796 4.96E-05 Pmp70 FBtr0335155|FBtr0074795|FBtr0335157|FBtr0335156 19758756|19758756|19758756|19758756 19759280|19759280|19759280|19759280 X + 19758879 19758925 3'utr Pmp70 FlyBase G63114.1 AAGTTGGAAATGCTTCCTTGTTTCGATTGTGATTGTTTCTTTTGTAC 47 19758905 0.687773863 6 45 588 0.960784314 1.389166084 0.098039216 0.085106383 0.156862745 47 1 1 49 X:19758879-19758925 7 Pmp70 FBtr0335156|FBtr0335157|FBtr0074795|FBtr0335155 19758756|19758756|19758756|19758756 19759280|19759280|19759280|19759280 TGTGATT 7mer-m1 dme-miR-308-3p X + 19758875 19758919 3'utr Pmp70 FlyBase G47596.1 TTGCAAGTTGGAAATGCTTCCTTGTTTCGATTGTGATTGTTTCTT 39 19758912 0.876690919 8 36 468 0.925925926 1.096910013 0 0.307692308 0.5 39 1 3 50 X:19758875-19758919 7 42 2760 FBgn0031069 864.5033333 34.21666667 52.20333333 0.048582809 1.227471992 0.804546325 1 -6 -2.5 0.25 dme-miR-79-3p 6mer3-8 TAGCTT X 19759339 19759344 - X_19759339_19759344_- 0.723795242 0.993979476 0.858887359 0.191049151 CG12702 FBtr0074809|FBtr0335137|FBtr0346378 19759171|19759171|19759171 19759370|19759370|19759370 X - 19759296 19759348 3'utr CG12702 FlyBase G69188.1 AATATAGCTTAGACTAGTAGCATCTATCGATGAACTCCACTCCGCCGGCATCA 17 19759340 0.892375292 4 15 111 0.842105263 1.204119983 0.052631579 0.117647059 0.210526316 17 3 0 16 X:19759296-19759348 6 CG12702 FBtr0346378|FBtr0335137|FBtr0074809 19759171|19759171|19759171 19759370|19759370|19759370 TAGCTT 6mer3-8 dme-miR-79-3p X - 19759297 19759350 3'utr CG12702 FlyBase G52036.1 TTAATATAGCTTAGACTAGTAGCATCTATCGATGAACTCCACTCCGCCGGCATC 6 19759340 0.980243268 3 6 45 1 0.903089987 0 0.333333333 0.5 6 0 0 8 X:19759297-19759350 6 7.5 2761 FBgn0031070 235.6866667 9.673333333 14.61 0.03182191 0.77532736 0.513347023 -4 -4 -4 0.25 dme-miR-8-3p 6mer2-7 AGTATT X 19832499 19832504 - X_19832499_19832504_- 0.94327003 0.999996703 0.971633367 0.040111834 pico FBtr0074804|FBtr0303995|FBtr0074805|FBtr0303996 19831605|19831605|19830213|19831605 19833338|19833338|19833338|19833338 X - 19832410 19832526 3'utr pico FlyBase G69207.1 TTTTAATTGTTTAGTTGCTCGTAGTATTGATTTTATACATTATATCTTTTTTTTGCGATTATCTTTGTAACGGTAGAGTGAACGTTTTGTGAGCGCATGAAATGCGCTGCGCTAGCA 31 19832495 0.993480905 11 30 371 0.972972973 1.556302501 0.189189189 0.161290323 0.297297297 31 1 0 36 X:19832410-19832526 6 pico FBtr0074804|FBtr0303995|FBtr0074805|FBtr0303996 19831605|19831605|19830213|19831605 19833338|19833338|19833338|19833338 AGTATT 6mer2-7 dme-miR-8-3p X - 19832481 19832525 3'utr pico FlyBase G52052.1 TTTAATTGTTTAGTTGCTCGTAGTATTGATTTTATACATTATATC 13 19832495 0.871755906 8 11 153 0.772727273 1.230448921 0 0.538461538 0.727272727 13 5 0 17 X:19832481-19832525 6 18.5 2762 FBgn0261811 2157.516667 40.99333333 63.13 0.008574673 0.451292893 0.293046095 -9 -9 -9 0.25 dme-miR-277-3p 7mer-m8 TGCATTT X 19832607 19832613 - X_19832607_19832613_- 0.605905741 0.596502941 0.601204341 0.006648784 pico FBtr0074804|FBtr0303995|FBtr0074805|FBtr0303996 19831605|19831605|19830213|19831605 19833338|19833338|19833338|19833338 X - 19832592 19832637 3'utr pico FlyBase G69208.1 ATTTTAGTTTGTAAAAAGGAAAAATGCATTTTAGAAACGATAGTGC 19 19832610 0.85823377 6 18 151 0.956521739 1.342422681 0.086956522 0.210526316 0.347826087 19 1 0 22 X:19832592-19832637 7 pico FBtr0074804|FBtr0303995|FBtr0074805|FBtr0303996 19831605|19831605|19830213|19831605 19833338|19833338|19833338|19833338 TGCATTT 7mer-m8 dme-miR-277-3p X - 19832584 19832637 3'utr pico FlyBase G52053.1 ATTTTAGTTTGTAAAAAGGAAAAATGCATTTTAGAAACGATAGTGCATTATTTA 13 19832611 0.978217934 5 12 94 0.941176471 1.204119983 0 0.230769231 0.411764706 13 1 0 16 X:19832584-19832637 7 14.5 2763 FBgn0261811 2157.516667 40.99333333 63.13 0.00672069 0.353716051 0.229684777 -3 -2 -2.5 0.25 dme-miR-8-3p 7mer-m8 CAGTATT X 19905160 19905166 + X_19905160_19905166_+ 0.661521687 0.661191372 0.66135653 0.000233557 Hers FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800|FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19906687|19906687|19906687|19906687|19908108|19908108|19906687|19906687 X + 19905142 19905178 3'utr Hers FlyBase G63193.1 ATTGTTTTGATCAGTCTACAGTATTGTTAAAGATATT 19 19905158 0.612760804 6 17 186 0.9 1.255272505 0 0.052631579 0.1 19 2 0 18 X:19905142-19905178 7 Hers FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523|FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19908108|19908108|19906687|19906687|19906687|19906687|19906687|19906687 CAGTATT 7mer-m8 dme-miR-8-3p X + 19905127 19905180 3'utr Hers FlyBase G47652.1 TAGAGAGAAAGTTACATTGTTTTGATCAGTCTACAGTATTGTTAAAGATATTTT 19 19905157 0.989674669 8 18 176 0.961538462 1.397940009 0.192307692 0.263157895 0.461538462 19 1 0 25 X:19905127-19905180 7 18 2764 FBgn0052529 4274.003333 62.55666667 96.43 0.004211508 0.287739117 0.186663901 2 3 2.5 0.25 dme-miR-932-5p 7mer-m8 GGAATTG X 19905694 19905700 + X_19905694_19905700_+ 0.667769005 0.702924505 0.685346755 0.024858692 Hers FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800|FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19906687|19906687|19906687|19906687|19908108|19908108|19906687|19906687 X + 19905608 19905705 3'utr Hers FlyBase G63197.1 AAGTTGTATGTATTTATTATCATTAATATCGAGTAAGTCAGCATTCTGTGTACAGTTTTCCGCTCGCTTTTGCTCTAATCGCTCAAGGAATTGGTTTA 22 19905678 0.777246745 14 20 205 0.916666667 1.041392685 0.208333333 0.090909091 0.166666667 22 1 1 22 X:19905608-19905705 7 Hers FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523|FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19908108|19908108|19906687|19906687|19906687|19906687|19906687|19906687 GGAATTG 7mer-m8 dme-miR-932-5p X + 19905638 19905711 3'utr Hers FlyBase G47656.1 GAGTAAGTCAGCATTCTGTGTACAGTTTTCCGCTCGCTTTTGCTCTAATCGCTCAAGGAATTGGTTTAACCACC 12 19905665 0.985472996 9 11 95 0.947368421 1.255272505 0.263157895 0.5 0.684210526 12 1 0 18 X:19905638-19905711 7 3.5 2765 FBgn0052529 4274.003333 62.55666667 96.43 0.000818904 0.055949273 0.036295759 16 29 22.5 0.25 dme-miR-317-3p 7mer-m8 TGTGTTC X 19906402 19906408 + X_19906402_19906408_+ 0.659011165 0.658255655 0.65863341 0.000534219 Hers FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800|FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19906687|19906687|19906687|19906687|19908108|19908108|19906687|19906687 X + 19906234 19906460 3'utr Hers FlyBase G63201.1 TCTAACTATAATTTCTGACATATTTGAGATTTCTGGCTCCAGAGGCGGAAAACTGGATGGCTTGACATCGATCCTTGCTAGGCGCTGTTGGTATATATTTTTATTTGTTGTTAGTTTTTGTAAGCGATTGAACACACATTTTGTACTCTTGATTTGACATTTATCTTTTGTGTTCGCCTTAGTTTGGAAATTTGATTTCAGAGACATGATTTTCTTTCGGTTAACTA 99 19906401 0.965066754 35 93 938 0.947826087 2.037426498 0.252173913 0.141414141 0.260869565 99 6 0 109 X:19906234-19906460 7 Hers FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523|FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19908108|19908108|19906687|19906687|19906687|19906687|19906687|19906687 TGTGTTC 7mer-m8 dme-miR-317-3p X + 19906244 19906445 3'utr Hers FlyBase G47659.1 ATTTCTGACATATTTGAGATTTCTGGCTCCAGAGGCGGAAAACTGGATGGCTTGACATCGATCCTTGCTAGGCGCTGTTGGTATATATTTTTATTTGTTGTTAGTTTTTGTAAGCGATTGAACACACATTTTGTACTCTTGATTTGACATTTATCTTTTGTGTTCGCCTTAGTTTGGAAATTTGATTTCAGAGACATGATTT 41 19906401 0.989288363 20 40 390 0.984375 1.799340549 0.171875 0.43902439 0.640625 41 1 0 63 X:19906244-19906445 7 14 2766 FBgn0052529 4274.003333 62.55666667 96.43 0.003275617 0.223797091 0.145183034 1 1 1 0.25 dme-miR-995-5p 7mer-A1 ATTCGGA X 20157242 20157248 - X_20157242_20157248_- 0.604317955 0.78291169 0.693614822 0.126284816 Rab35 FBtr0070028|FBtr0333549|FBtr0333548|FBtr0303258 20156477|20155764|20157143|20157088 20157582|20157582|20157582|20157582 X - 20157214 20157254 3'utr Rab35 FlyBase G69239.1 AGTTTTATTCGGAATAATGCCAGATAGCCGTAAATTAAAGT 13 20157237 0.808350991 3 12 73 0.941176471 1.204119983 0 0.230769231 0.411764706 13 1 0 16 X:20157214-20157254 7 Rab35 FBtr0303258|FBtr0333548|FBtr0333549|FBtr0070028 20157088|20157143|20155764|20156477 20157582|20157582|20157582|20157582 ATTCGGA 7mer-A1 dme-miR-995-5p X - 20157224 20157264 3'utr Rab35 FlyBase G52073.1 TTTCCTCCTCAGTTTTATTCGGAATAATGCCAGATAGCCGT 5 20157237 0.980659776 3 5 42 1 0.903089987 0 0.4 0.625 5 0 0 8 X:20157224-20157264 7 8.5 2767 FBgn0031090 1038.15 62.16666667 96 0.008187641 0.136729223 0.088541667 -11 -11 -11 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA X 20168120 20168126 - X_20168120_20168126_- 0.823275845 0.823240716 0.82325828 2.48E-05 CG9581 FBtr0070026 20168040 20168150 X - 20168093 20168150 3'utr CG9581 FlyBase G69253.1 GAGCTCACAACGAAAACCAAATTCCTAGTCATAAGCCTTTCATTCTCCCGACAACCTT 29 20168129 0.96095212 4 28 138 0.945945946 1.544068044 0.216216216 0.275862069 0.432432432 29 2 0 35 X:20168093-20168150 7 CG9581 FBtr0070026 20168040 20168150 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X - 20168043 20168144 3'utr CG9581 FlyBase G52079.1 ACAACGAAAACCAAATTCCTAGTCATAAGCCTTTCATTCTCCCGACAACCTTATGAGCTGATTTGGGTCCTAAAGTAAAGGCAGATGCTGTATTTATAAATG 20 20168128 0.975116322 6 18 113 0.884615385 1.361727836 0.153846154 0.25 0.423076923 20 3 0 23 X:20168043-20168144 7 21.5 2768 FBgn0031093 169.6733333 10.98333333 16.82 0.126714078 1.957511381 1.27824019 3 2 2.5 0.25 dme-miR-305-3p 6mer2-7 TGTGCC X 20171524 20171529 - X_20171524_20171529_- 0.701221705 0.999966783 0.850594244 0.211244686 AnxB10 FBtr0070025|FBtr0301931 20171443|20171443 20171591|20171591 X - 20171468 20171552 3'utr AnxB10 FlyBase G69260.1 CGTGTTAATAGCTTTGATCGTAGTGTGCCTTTTAGGAAAATCGCTTTTAATGTCGTCTGCGCATGCGCACACTGTTGGCAATAAA 32 20171521 0.89442581 12 30 259 0.951219512 1.591064607 0.219512195 0.1875 0.365853659 32 2 0 39 X:20171468-20171552 6 AnxB10 FBtr0070025|FBtr0301931 20171443|20171443 20171591|20171591 TGTGCC 6mer2-7 dme-miR-305-3p X - 20171474 20171539 3'utr AnxB10 FlyBase G52084.1 TTGATCGTAGTGTGCCTTTTAGGAAAATCGCTTTTAATGTCGTCTGCGCATGCGCACACTGTTGGC 19 20171521 0.981546168 10 17 125 0.925925926 1.397940009 0.296296296 0.421052632 0.592592593 19 2 0 25 X:20171474-20171539 6 17 2769 FBgn0000084 609.39 60.31 92.3 0.027896749 0.281876969 0.184182015 -8 -8 -8 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 20182235 20182240 - X_20182235_20182240_- 0.969628626 0.939901456 0.954765041 0.021020234 Sdic2 FBtr0345925|FBtr0345925|FBtr0345925|FBtr0089610|FBtr0089610|FBtr0089610|FBtr0345926|FBtr0345926|FBtr0345926 20181741|20181741|20181741|20182036|20182036|20182036|20181588|20181588|20181588 20182337|20182337|20182337|20182337|20182337|20182337|20182337|20182337|20182337 X - 20182216 20182249 3'utr Sdic2 FlyBase G69266.1 TGTATCTTTTGTGATCCCGCTACTGTGTATAGCC 11 20182241 0.879786836 4 11 103 1 1.146128036 0.142857143 0.181818182 0.357142857 11 0 0 14 X:20182216-20182249 6 Sdic2 FBtr0345926|FBtr0345926|FBtr0345926|FBtr0089610|FBtr0089610|FBtr0089610|FBtr0345925|FBtr0345925|FBtr0345925 20181588|20181588|20181588|20182036|20182036|20182036|20181741|20181741|20181741 20182337|20182337|20182337|20182337|20182337|20182337|20182337|20182337|20182337 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 20182224 20182250 3'utr Sdic2 FlyBase G52087.1 TTGTATCTTTTGTGATCCCGCTACTGT 6 20182242 0.677388768 2 6 60 1 1.041392685 0.181818182 0.833333333 0.909090909 6 0 0 11 X:20182224-20182250 6 8.5 2770 FBgn0053497 6.756666667 0.41 0.633333333 1.258016774 20.73170732 13.42105263 1 2 1.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 20228616 20228621 - X_20228616_20228621_- 0.961122464 0.956340978 0.958731721 0.003381031 sw FBtr0089402|FBtr0089402|FBtr0089402|FBtr0340361|FBtr0340361|FBtr0340361|FBtr0089397|FBtr0089397|FBtr0089397|FBtr0089409|FBtr0089409|FBtr0089409|FBtr0089399|FBtr0089399|FBtr0089399|FBtr0089403|FBtr0089403|FBtr0089403|FBtr0089407|FBtr0089407|FBtr0089407|FBtr0089408|FBtr0089408|FBtr0089408|FBtr0089398|FBtr0089398|FBtr0089398|FBtr0089401|FBtr0089401|FBtr0089401|FBtr0089400|FBtr0089400|FBtr0089400|FBtr0089404|FBtr0089404|FBtr0089404|FBtr0089406|FBtr0089406|FBtr0089406|FBtr0340360|FBtr0340360|FBtr0340360|FBtr0089405|FBtr0089405|FBtr0089405 20227959|20227959|20227959|20227959|20227959|20227959|20228122|20228122|20228122|20228122|20228122|20228122|20227959|20227959|20227959|20227959|20227959|20227959|20228122|20228122|20228122|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20228122|20228122|20228122|20228122|20228122|20228122|20227959|20227959|20227959|20228122|20228122|20228122 20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718 X - 20228606 20228632 3'utr sw FlyBase G69279.1 TTTGTATCTTTTGTGATCCCGCTACTG 7 20228622 0.655741663 2 6 62 0.875 0.84509804 0.375 0.142857143 0.25 7 1 0 7 X:20228606-20228632 6 sw FBtr0089403|FBtr0089403|FBtr0089403|FBtr0089404|FBtr0089404|FBtr0089404|FBtr0089407|FBtr0089407|FBtr0089407|FBtr0340360|FBtr0340360|FBtr0340360|FBtr0089402|FBtr0089402|FBtr0089402|FBtr0340361|FBtr0340361|FBtr0340361|FBtr0089408|FBtr0089408|FBtr0089408|FBtr0089409|FBtr0089409|FBtr0089409|FBtr0089399|FBtr0089399|FBtr0089399|FBtr0089401|FBtr0089401|FBtr0089401|FBtr0089406|FBtr0089406|FBtr0089406|FBtr0089405|FBtr0089405|FBtr0089405|FBtr0089398|FBtr0089398|FBtr0089398|FBtr0089400|FBtr0089400|FBtr0089400|FBtr0089397|FBtr0089397|FBtr0089397 20227959|20227959|20227959|20228122|20228122|20228122|20228122|20228122|20228122|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20227959|20228122|20228122|20228122|20227959|20227959|20227959|20227959|20227959|20227959|20228122|20228122|20228122|20228122|20228122|20228122|20227959|20227959|20227959|20227959|20227959|20227959|20228122|20228122|20228122 20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718|20228718 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 20228608 20228632 3'utr sw FlyBase G52093.1 TTTGTATCTTTTGTGATCCCGCTAC 7 20228622 0.694488948 2 6 61 0.9 0.954242509 0.2 0.285714286 0.5 7 1 0 9 X:20228608-20228632 6 7 2771 FBgn0003654 899.0166667 37.47 57.48333333 0.007786285 0.18681612 0.121774427 1 1 1 0.25 dme-miR-14-3p 6mer3-8 AAGACT X 20248355 20248360 - X_20248355_20248360_- 0.922710858 0.971054942 0.9468829 0.03418437 CG17068 FBtr0077341 20248307 20248868 X - 20248345 20248371 3'utr CG17068 FlyBase G69281.1 AAGATTTACACAAGACTAAATTGGTAT 13 20248366 0.585355024 4 13 69 1 1.230448921 0.058823529 0.307692308 0.470588235 13 0 0 17 X:20248345-20248371 6 CG17068 FBtr0077341 20248307 20248868 AAGACT 6mer3-8 dme-miR-14-3p X - 20248341 20248376 3'utr CG17068 FlyBase G52095.1 ATTTTAAGATTTACACAAGACTAAATTGGTATATTT 9 20248367 0.766538447 3 8 54 0.916666667 1.041392685 0.083333333 0.222222222 0.416666667 9 1 0 11 X:20248341-20248376 6 11 2772 FBgn0031098 134.3766667 5.846666667 8.906666667 0.08185945 1.881413911 1.23502994 6 7 6.5 0.25 dme-miR-184-3p 6mer3-8 TCCGTC X 2025349 2025354 - X_2025349_2025354_- 0.875333221 0.871257426 0.873295324 0.002882026 Actn FBtr0070343|FBtr0310659|FBtr0310657|FBtr0070345|FBtr0070344|FBtr0310658|FBtr0333802|FBtr0333801|FBtr0303048 2025114|2025114|2024754|2023820|2025114|2025114|2025114|2025114|2025114 2025540|2025540|2025540|2025540|2025540|2025540|2025540|2025540|2025540 X - 2025316 2025364 3'utr Actn FlyBase G64175.1 TTTATTAATTTCCGTCTCGAGCCGATGTATGCGACCCACACATACAAAA 9 2025355 0.98348232 3 9 72 1 0.954242509 0 0 0 9 0 0 9 X:2025316-2025364 6 Actn FBtr0310658|FBtr0333802|FBtr0333801|FBtr0303048|FBtr0070343|FBtr0310657|FBtr0310659|FBtr0070345|FBtr0070344 2025114|2025114|2025114|2025114|2025114|2024754|2025114|2023820|2025114 2025540|2025540|2025540|2025540|2025540|2025540|2025540|2025540|2025540 TCCGTC 6mer3-8 dme-miR-184-3p X - 2025336 2025363 3'utr Actn FlyBase G48376.1 TTATTAATTTCCGTCTCGAGCCGATGTA 9 2025355 0.706860117 2 9 67 1 1.113943352 0 0.222222222 0.461538462 9 0 0 13 X:2025336-2025363 6 9 2773 FBgn0000667 602.5766667 20.25333333 31.07 0.014935859 0.444371297 0.289668491 1 1 1 0.25 dme-miR-968-5p 7mer-A1 CTACTTA X 20254010 20254016 + X_20254010_20254016_+ 0.620012088 0.499062304 0.559537196 0.085524424 Rab10 FBtr0077337 20253262 20254691 X + 20253901 20254037 3'utr Rab10 FlyBase G63216.1 GCACTCCCCAGCCGCCCCACTTAGTGTTTCGTTTTTGTTTTGCGTTTCAGCCTAGATATAAATAACACCTATACATATTATACATCGGATAGTAGTATATAGCCTATACCTACTTAGCTTGCTTTCGCTTTCTATGT 27 20254014 0.989341826 14 26 254 0.96875 1.491361694 0.1875 0.185185185 0.3125 27 1 0 31 X:20253901-20254037 7 Rab10 FBtr0077337 20253262 20254691 CTACTTA 7mer-A1 dme-miR-968-5p X + 20254000 20254033 3'utr Rab10 FlyBase G47668.1 TAGCCTATACCTACTTAGCTTGCTTTCGCTTTCT 7 20254014 0.72095455 4 6 59 0.866666667 1.113943352 0 0.571428571 0.8 7 2 0 13 X:20254000-20254033 7 8.5 2774 FBgn0015789 1230.126667 63.84666667 97.75 0.006909858 0.133131461 0.086956522 -4 -4 -4 0.25 dme-bantam-3p 6mer3-8 TGATCT X 2039002 2039007 - X_2039002_2039007_- 0.773921982 0.785095788 0.779508885 0.00790107 usp FBtr0070346|FBtr0333803 2038796|2038796 2039386|2039386 X - 2038981 2039033 5'utr usp FlyBase G64186.1 TAACGGTTAAAATTAATGCATAGTTATGATCTACAGACGTATGTAAACATACA 85 2039007 0.722550715 5 80 571 0.923809524 1.986771734 0.19047619 0.188235294 0.342857143 85 8 0 97 X:2038981-2039033 6 usp FBtr0070346|FBtr0333803 2038796|2038796 2039386|2039386 TGATCT 6mer3-8 dme-bantam-3p X - 2038982 2039029 5'utr usp FlyBase G48383.1 GGTTAAAATTAATGCATAGTTATGATCTACAGACGTATGTAAACATAC 44 2039007 0.707469333 4 42 273 0.971428571 1.832508913 0.357142857 0.340909091 0.585714286 44 2 0 68 X:2038982-2039029 6 63.5 2775 FBgn0003964 1386.533333 66.48333333 101.85 0.045797673 0.955126598 0.623465881 0 0 0 0.25 dme-miR-308-3p 7mer-m1 TGTGATT X 2039331 2039337 - X_2039331_2039337_- 0.484570165 0.400988785 0.442779475 0.059100975 usp FBtr0070346|FBtr0333803 2038796|2038796 2039386|2039386 X - 2039291 2039360 5'utr usp FlyBase G64188.1 TCTCCATCCGAAAAATGTTTCATTGTGATTGCGTTTGTTTGCATTTCTCCTCTCTATCCCTTATACCCTA 295 2039338 0.629756868 17 277 3251 0.938172043 1.542825427 0.206989247 0.210169492 0.373655914 295 14 9 349 X:2039291-2039360 7 usp FBtr0070346|FBtr0333803 2038796|2038796 2039386|2039386 TGTGATT 7mer-m1 dme-miR-308-3p X - 2039295 2039356 5'utr usp FlyBase G48385.1 CATCCGAAAAATGTTTCATTGTGATTGCGTTTGTTTGCATTTCTCCTCTCTATCCCTTATAC 199 2039332 0.691215852 11 191 2120 0.969798658 1.682746592 0.241610738 0.346733668 0.563758389 199 4 5 289 X:2039295-2039356 7 210.5 2776 FBgn0003964 1386.533333 66.48333333 101.85 0.151817482 3.166207069 2.06676485 1 -5 -2 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA X 20426559 20426566 - X_20426559_20426566_- 0.649916715 0.649070209 0.649493462 0.000598566 CG15456 FBtr0077323|FBtr0077323|FBtr0077323 20426507|20426507|20426507 20426645|20426645|20426645 X - 20426541 20426608 3'utr CG15456 FlyBase G69304.1 GCTTCACGCTTACACCAACATTTGTGGAACCCATTTGAAATCCTGTGATATATGGTATATACATATAT 39 20426568 0.815469078 8 34 326 0.88372093 1.102662342 0.186046512 0.102564103 0.186046512 39 3 2 38 X:20426541-20426608 8 CG15456 FBtr0077323|FBtr0077323|FBtr0077323 20426507|20426507|20426507 20426645|20426645|20426645 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 20426531 20426602 3'utr CG15456 FlyBase G52110.1 CGCTTACACCAACATTTGTGGAACCCATTTGAAATCCTGTGATATATGGTATATACATATATAATAATAAAT 24 20426568 0.964384997 10 23 201 1 1.568201724 0.162162162 0.333333333 0.567567568 24 0 0 37 X:20426531-20426602 8 27 2777 FBgn0040650 15.33333333 4.38 6.593333333 1.760869565 6.164383562 4.095045501 2 2 2 0.25 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG X 20470644 20470650 - X_20470644_20470650_- 0.471793993 0.461672206 0.4667331 0.007157193 RhoGAP19D FBtr0304906|FBtr0301537|FBtr0340405|FBtr0345015 20469953|20469953|20469953|20469953 20472033|20472033|20472033|20472033 X - 20470633 20470673 3'utr RhoGAP19D FlyBase G69311.1 TTTCTTTTCTTCTTTGTACCTCTGTACCTGTTGTACAAAAA 31 20470651 0.802699252 4 31 287 1 1.62324929 0.285714286 0.193548387 0.404761905 31 0 0 42 X:20470633-20470673 7 RhoGAP19D FBtr0345015|FBtr0340405|FBtr0301537|FBtr0304906 20469953|20469953|20469953|20469953 20472033|20472033|20472033|20472033 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" X - 20470635 20470662 3'utr RhoGAP19D FlyBase G52114.1 CTTTGTACCTCTGTACCTGTTGTACAAA 18 20470651 0.786797628 2 18 142 1 1.342422681 0.227272727 0.222222222 0.363636364 18 0 0 22 X:20470635-20470662 7 24.5 2778 FBgn0031118 1322.826667 17.35333333 26.62 0.018520945 1.411832501 0.920360631 1 1 1 0.25 dme-miR-11-3p 7mer-m1 TGTGATG X 20514947 20514953 + X_20514947_20514953_+ 0.597293006 0.589160214 0.59322661 0.005750758 CG1812 FBtr0077312 20514813 20515828 X + 20514910 20514975 3'utr CG1812 FlyBase G63274.1 TGTGTAGCTAGCGTAGACCTATGTACATGCGAGATTTTGTGATGACTGCAGTAACGAAAATGTGCC 28 20514946 0.981450366 8 26 186 0.945945946 1.243038049 0.297297297 0.214285714 0.405405405 28 1 1 35 X:20514910-20514975 7 CG1812 FBtr0077312 20514813 20515828 TGTGATG 7mer-m1 dme-miR-11-3p X + 20514911 20514965 3'utr CG1812 FlyBase G47706.1 GTGTAGCTAGCGTAGACCTATGTACATGCGAGATTTTGTGATGACTGCAGTAACG 18 20514946 0.980803042 6 18 128 1 1.380211242 0.458333333 0.222222222 0.416666667 18 0 0 24 X:20514911-20514965 7 19.5 2779 FBgn0031119 225 8.363333333 12.75 0.086666667 2.331606218 1.529411765 1 1 1 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA X 20515531 20515538 + X_20515531_20515538_+ 0.414987175 0.401069692 0.408028434 0.009841159 CG1812 FBtr0077312 20514813 20515828 X + 20515506 20515560 3'utr CG1812 FlyBase G63277.1 ATAGAGTGTAAAATATGTAGAACATGTACTTAATTTGTATAAACTAGAAAAAGTT 57 20515530 0.895044842 5 56 521 0.984615385 1.806179974 0.246153846 0.122807018 0.230769231 57 1 0 64 X:20515506-20515560 8 CG1812 FBtr0077312 20514813 20515828 GTACTTAA 8mer-A1 dme-miR-252-5p X + 20515509 20515556 3'utr CG1812 FlyBase G47708.1 GAGTGTAAAATATGTAGAACATGTACTTAATTTGTATAAACTAGAAAA 47 20515530 0.886382602 4 47 406 1 1.84509804 0.157142857 0.382978723 0.585714286 47 0 0 70 X:20515509-20515556 8 51.5 2780 FBgn0031119 225 8.363333333 12.75 0.228888889 6.157831806 4.039215686 1 1 1 0.25 dme-miR-986-5p 6mer2-7 TTCGAG X 20515965 20515970 - X_20515965_20515970_- 0.742176117 0.522908042 0.63254208 0.15504596 Tak1 FBtr0077319|FBtr0340404 20515906|20515906 20516300|20516300 X - 20515922 20515998 3'utr Tak1 FlyBase G69331.1 ACACACTTAGCATTAGCACATGTATCTGTTCGAGGAAGCTGACAAGGAGTAGACCAAAAAAATATAAAAACCATCGA 77 20515978 0.983729794 9 77 590 1 1.963787827 0.043478261 0.181818182 0.315217391 77 0 0 92 X:20515922-20515998 6 Tak1 FBtr0077319|FBtr0340404 20515906|20515906 20516300|20516300 TTCGAG 6mer2-7 dme-miR-986-5p X - 20515928 20516000 3'utr Tak1 FlyBase G52125.1 AAACACACTTAGCATTAGCACATGTATCTGTTCGAGGAAGCTGACAAGGAGTAGACCAAAAAAATATAAAAAC 53 20515978 0.982303798 6 53 396 1 1.892094603 0.076923077 0.377358491 0.576923077 53 0 0 78 X:20515928-20516000 6 61.5 2781 FBgn0026323 737.6966667 30.11333333 45.87333333 0.083367599 2.042284702 1.340648162 8 8 8 0.25 dme-miR-970-3p 6mer3-8 TCTTAT X 20516257 20516262 - X_20516257_20516262_- 0.999787465 0.998295621 0.999041543 0.001054933 Tak1 FBtr0077319|FBtr0340404 20515906|20515906 20516300|20516300 X - 20516244 20516309 stop_codon Tak1 FlyBase G69333.1 AATGCGTAGTCTCGTGCGCTGCCGATTCGATCGATCGACTCTCTATGTCTTATAGGCTAGTACTCT 9 20516260 0.758871517 9 9 72 1 1 0.4 0.111111111 0.2 9 0 0 10 X:20516244-20516309 6 Tak1 FBtr0077319|FBtr0340404 20515906|20515906 20516300|20516300 TCTTAT 6mer3-8 dme-miR-970-3p X - 20516243 20516307 stop_codon Tak1 FlyBase G52127.1 TGCGTAGTCTCGTGCGCTGCCGATTCGATCGATCGACTCTCTATGTCTTATAGGCTAGTACTCTA 11 20516290 0.810567704 6 10 83 0.875 1.322219295 0.333333333 0.727272727 0.875 11 3 0 21 X:20516243-20516307 6 5 2782 FBgn0026323 737.6966667 30.11333333 45.87333333 0.006777854 0.166039407 0.108995785 -2 28 13 0.25 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 2055118 2055125 + X_2055118_2055125_+ 0.6296161 0.628919064 0.629267582 0.000492853 CG4313 FBtr0340109|FBtr0340108|FBtr0340107 2054944|2054944|2054944 2055414|2055414|2055414 X + 2055099 2055148 3'utr CG4313 FlyBase G58179.1 AGTGCCTCCAAAAAAGATTTCTAGTCACATGATCCGGCCGGTCGTCCCTT 14 2055117 0.976627208 4 13 87 0.882352941 1.176091259 0.235294118 0.142857143 0.294117647 14 2 0 15 X:2055099-2055148 8 CG4313 FBtr0340107|FBtr0340109|FBtr0340108 2054944|2054944|2054944 2055414|2055414|2055414 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X + 2055097 2055132 3'utr CG4313 FlyBase G44006.1 ATAGTGCCTCCAAAAAAGATTTCTAGTCACATGATC 8 2055117 0.978349085 2 6 35 0.777777778 0.84509804 0.222222222 0.125 0.222222222 8 2 0 7 X:2055097-2055132 8 9.5 2783 FBgn0025632 50.11333333 3.046666667 4.636666667 0.189570307 3.118161926 2.048885694 1 1 1 0.25 dme-miR-1006-3p 7mer-m8 CGAATTT X 21039229 21039235 + X_21039229_21039235_+ 0.400347442 0.515472783 0.457910112 0.081405951 Ntf-2 FBtr0333760|FBtr0113007|FBtr0333762 21038858|21037719|21038858 21039543|21039543|21041467 X + 21039221 21039276 3'utr Ntf-2 FlyBase G63295.1 AGGACTATCGAATTTGGTGGTATGTGCCGTGCTACAAGCTCGTATTTCGAATTCCC 9 21039235 0.92334403 7 9 60 1 1.079181246 0.5 0.333333333 0.5 9 0 0 12 X:21039221-21039276 7 Ntf-2 FBtr0333762|FBtr0113007|FBtr0333760 21038858|21037719|21038858 21041467|21039543|21039543 CGAATTT 7mer-m8 dme-miR-1006-3p X + 21039197 21039251 3'utr Ntf-2 FlyBase G47725.1 TGGATCTCGCGATCTAATTTAGCTAGGACTATCGAATTTGGTGGTATGTGCCGTG 13 21039229 0.976713341 6 12 100 0.941176471 1.204119983 0.705882353 0.230769231 0.411764706 13 1 0 16 X:21039197-21039251 7 7.5 2784 FBgn0031145 2698.153333 430.73 661.49 0.002779679 0.0174123 0.01133804 -6 0 -3 0.25 dme-miR-317-3p 7mer-m8 TGTGTTC X 21050232 21050238 - X_21050232_21050238_- 0.661582202 0.661609808 0.661596005 1.95E-05 CG1518 FBtr0345923|FBtr0077264 21049883|21049962 21050270|21050270 X - 21050109 21050316 stop_codon CG1518 FlyBase G69358.1 GGTGCGCATCTACAAGGTTAAGGATCTGCCGAATCGTGGAGTCTGAGAAATAAGTGTCGCAGTCATTCCGCTCTATTCTGTGTTCTGTACATTAGCTAACTCTGCCCGTCTCCCTCTATCTCGAATATTTGGCAATCTCTCTCGCTCTATGAGCACCAATTGCTGCATTCTCCTGCTTTGCCCATCATGCATTTAGTTCTACACTGGC 211 21050240 0.896288387 34 202 1959 0.957198444 2.390935107 0.13618677 0.184834123 0.3307393 211 11 0 246 X:21050109-21050316 7 CG1518 FBtr0345923|FBtr0077264 21049883|21049962 21050270|21050270 TGTGTTC 7mer-m8 dme-miR-317-3p X - 21050081 21050382 stop_codon CG1518 FlyBase G52149.1 CGAGATCGGCAACAAGGACTTTGAACTGGATGTCATGGAGGAGGCGTACACCACGGAGCACTGGCTGGTGCGCATCTACAAGGTTAAGGATCTGCCGAATCGTGGAGTCTGAGAAATAAGTGTCGCAGTCATTCCGCTCTATTCTGTGTTCTGTACATTAGCTAACTCTGCCCGTCTCCCTCTATCTCGAATATTTGGCAATCTCTCTCGCTCTATGAGCACCAATTGCTGCATTCTCCTGCTTTGCCCATCATGCATTTAGTTCTACACTGGCACAAAACCACAAAAACCAAGTATTTTTT 155 21050240 0.987604808 37 145 1296 0.94092827 1.503206823 0.126582278 0.35483871 0.578059072 155 8 6 223 X:21050081-21050382 7 92.5 2785 FBgn0031149 1278.48 56.59333333 86.55 0.072351542 1.634468135 1.068746389 2 2 2 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA X 21062678 21062685 - X_21062678_21062685_- 0.649617248 0.649668828 0.649643038 3.65E-05 CG32512 FBtr0077262|FBtr0077262|FBtr0077262|FBtr0340438|FBtr0340438|FBtr0340438|FBtr0332848|FBtr0332848|FBtr0332848|FBtr0332847|FBtr0332847|FBtr0332847 21062382|21062382|21062382|21062275|21062275|21062275|21062382|21062382|21062382|21062420|21062420|21062420 21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966 X - 21062595 21063085 stop_codon CG32512 FlyBase G69375.1 AGCGCATCCACAAGGGATTCCGGCGCATTCACATGACCATCGCCATTGGCAATATGACGGTCATGCTGACCACCTGCCTGCAGCTGTATTTTCTGGCATCGAAAATACGCCTTAGCTAAGGCAAGCCCGAAGTGAAGAATTTATAGATTTAGGTATCCACCACATAACAACGCATACACACACACACACATTACTACTACTGTACGTTCCACGTTCGATAAATGTCTCAAATTCAAATATGGCTTATTGAACACTTGAGTTTTTGAACTGGTCCTCCATCCGGCCCCAAATGCCCTTCCTCCGCCCCACACACGCCCACACCACCCATACGCCCATGCACGAAAATATTTAATTTCTCCCAAGGACGCCTTGTTTGCGACGACCTTTCCAATCTGATTTCCTGTGATAAACTCAGCCCAAAACTCCCAAAACAAAACACCCACCCGCAAACCACAGCACATTTAGCCTAGAGTTGATAGCCAATAATTTAC 887 21062688 0.984465956 77 817 6566 0.924783028 1.867875255 0.107039537 0.145434047 0.269045323 887 66 12 959 X:21062595-21063085 8 CG32512 FBtr0332847|FBtr0332847|FBtr0332847|FBtr0332848|FBtr0332848|FBtr0332848|FBtr0340438|FBtr0340438|FBtr0340438|FBtr0077262|FBtr0077262|FBtr0077262 21062420|21062420|21062420|21062382|21062382|21062382|21062275|21062275|21062275|21062382|21062382|21062382 21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 21062645 21062732 3'utr CG32512 FlyBase G52166.1 TTCTCCCAAGGACGCCTTGTTTGCGACGACCTTTCCAATCTGATTTCCTGTGATAAACTCAGCCCAAAACTCCCAAAACAAAACACCC 443 21062688 0.986273785 17 403 3534 0.907378336 2.062957834 0.09733124 0.340857788 0.541601256 443 55 4 578 X:21062645-21062732 8 529 2786 FBgn0052512 150.89 8.04 12.13666667 3.5058652 65.7960199 43.58692667 3 3 3 0.25 dme-miR-184-3p 7mer-m8 TCCGTCC X 21077165 21077171 + X_21077165_21077171_+ 0.606805597 0.62877684 0.617791218 0.015535985 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 X + 21077097 21077221 stop_codon bves FlyBase G63325.1 GTGCAATCTGAATTTATGCAACCGCCCGCTGCTGCTCAACTTGCCACGAACAGAAATCAGAGCACCCATCCGTCCCTTCACCTTTGACCTGCACAAGAACTACCAGAAAAACAACCCCACCCACA 115 21077173 0.966688129 15 105 567 0.90647482 1.498310554 0.086330935 0.173913043 0.316546763 115 10 3 126 X:21077097-21077221 7 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 TCCGTCC 7mer-m8 dme-miR-184-3p X + 21077095 21077200 stop_codon bves FlyBase G47750.1 AAGTGCAATCTGAATTTATGCAACCGCCCGCTGCTGCTCAACTTGCCACGAACAGAAATCAGAGCACCCATCCGTCCCTTCACCTTTGACCTGCACAAGAACTACC 91 21077173 0.969378518 16 82 456 0.905797101 1.795880017 0.057971014 0.417582418 0.615942029 91 12 1 125 X:21077095-21077200 7 86 2787 FBgn0031150 459.0933333 15.14333333 23.32333333 0.187325743 5.679066696 3.687294555 -8 -8 -8 0.25 dme-bantam-3p 7mer-A1 GATCTCA X 21078423 21078429 + X_21078423_21078429_+ 0.821442586 0.512327217 0.666884901 0.218577596 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 X + 21078359 21078459 3'utr bves FlyBase G63328.1 AAGTATAATGACTAGCATTGAAACTGGTTTGATTACAGCTCTTCAGCTTCAATTACCGATTCTAGATCTCAAGATCGATCAGTCTAGTGACAGGTGATAGG 14 21078419 0.981095638 11 14 97 1 1.146128036 0.428571429 0 0 14 0 0 14 X:21078359-21078459 7 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 GATCTCA 7mer-A1 dme-bantam-3p X + 21078409 21078459 3'utr bves FlyBase G47753.1 AATTACCGATTCTAGATCTCAAGATCGATCAGTCTAGTGACAGGTGATAGG 8 21078419 0.885381313 5 7 50 0.857142857 1.079181246 0.285714286 0.75 0.857142857 8 2 0 12 X:21078409-21078459 7 6.5 2788 FBgn0031150 459.0933333 15.14333333 23.32333333 0.014158341 0.429231785 0.278690868 4 4 4 0.25 dme-miR-277-3p 7mer-A1 GCATTTA X 21078535 21078541 + X_21078535_21078541_+ 0.79249644 0.822915763 0.807706102 0.021509764 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 X + 21078525 21078594 3'utr bves FlyBase G63329.1 TTACCGCTTGGCATTTACTGGAAATTTACTGTGCTGGCACATCAATCAAGTCTCTAAATCTTCCATTAAC 12 21078533 0.856169551 8 12 76 1 1.204119983 0.25 0.333333333 0.5 12 0 0 16 X:21078525-21078594 7 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 GCATTTA 7mer-A1 dme-miR-277-3p X + 21078516 21078586 3'utr bves FlyBase G47754.1 TCTTATTTCTTACCGCTTGGCATTTACTGGAAATTTACTGTGCTGGCACATCAATCAAGTCTCTAAATCTT 10 21078533 0.989496815 3 8 91 0.9375 1.176091259 0.4375 0.4 0.625 10 1 0 15 X:21078516-21078586 7 6.5 2789 FBgn0031150 459.0933333 15.14333333 23.32333333 0.014158341 0.429231785 0.278690868 2 2 2 0.25 dme-miR-8-3p 7mer-A1 AGTATTA X 21080882 21080888 + X_21080882_21080888_+ 0.746167553 0.74136377 0.743765661 0.0033968 bves FBtr0332845|FBtr0332846 21080843|21080843 21082391|21082391 X + 21080845 21080922 3'utr bves FlyBase G63333.1 AAGGGATCCAGATGAAATGTTTAGACTTGTGTTTTTGAGTATTATTAGATGTATATTTTAGGCAATACTGAGGAACGA 205 21080865 0.844099422 19 191 2042 0.926640927 2.380211242 0.135135135 0.224390244 0.386100386 205 19 0 240 X:21080845-21080922 7 bves FBtr0332845|FBtr0332846 21080843|21080843 21082391|21082391 AGTATTA 7mer-A1 dme-miR-8-3p X + 21080846 21080914 3'utr bves FlyBase G47759.1 AGGGATCCAGATGAAATGTTTAGACTTGTGTTTTTGAGTATTATTAGATGTATATTTTAGGCAATACTG 167 21080865 0.766667626 19 154 1663 0.908333333 2.338456494 0.133333333 0.353293413 0.55 167 22 0 218 X:21080846-21080914 7 52.5 2790 FBgn0031150 459.0933333 15.14333333 23.32333333 0.114355832 3.466872111 2.250964699 17 17 17 0.25 dme-miR-986-5p 7mer-m8 ATTCGAG X 2112760 2112766 + X_2112760_2112766_+ 0.387173128 0.388980992 0.38807706 0.001278378 csw FBtr0070379|FBtr0070380|FBtr0070378|FBtr0333260 2111732|2111800|2111800|2111800 2115701|2113664|2113664|2115701 X + 2112618 2112784 3'utr csw FlyBase G58239.1 TGAAACGGAAACGGGTTACCGGTTGGAGTGCAAATAAAGTTTTTAGTGTAGTAAGTGTTGACAAAATCGATAGAGAAGAAATTAGAGGAGTAACTGAGGCAGTAAGCACGTAACGATAATGATACAAAAAGCGTTGATTGTGATTCGAGTGACAGCGAGAACAGAAA 396 2112755 0.967813999 24 374 2421 0.945295405 1.594091062 0.396061269 0.131313131 0.24726477 396 15 10 432 X:2112618-2112784 7 csw FBtr0070378|FBtr0333260|FBtr0070379|FBtr0070380 2111800|2111800|2111732|2111800 2113664|2115701|2115701|2113664 ATTCGAG 7mer-m8 dme-miR-986-5p X + 2112618 2112784 3'utr csw FlyBase G44057.1 TGAAACGGAAACGGGTTACCGGTTGGAGTGCAAATAAAGTTTTTAGTGTAGTAAGTGTTGACAAAATCGATAGAGAAGAAATTAGAGGAGTAACTGAGGCAGTAAGCACGTAACGATAATGATACAAAAAGCGTTGATTGTGATTCGAGTGACAGCGAGAACAGAAA 275 2112755 0.974734241 22 250 1696 0.902147971 1.347042878 0.436754177 0.367272727 0.584725537 275 25 16 378 X:2112618-2112784 7 214 2791 FBgn0000382 593.5233333 15.53 24.04 0.360558697 13.77978107 8.901830283 5 5 5 0.25 dme-miR-92b-3p 6mer3-8 GTGCAA X 2113463 2113468 + X_2113463_2113468_+ 0.893175659 0.999980053 0.946577856 0.075522116 csw FBtr0070379|FBtr0070380|FBtr0070378|FBtr0333260 2111732|2111800|2111800|2111800 2115701|2113664|2113664|2115701 X + 2113432 2113473 3'utr csw FlyBase G58244.1 TAGCAGCGAAATGTAAATCAATTAGATTATTGTGCAAATTTG 5 2113461 0.9865841 3 5 42 1 0.698970004 0.4 0 0 5 0 0 5 X:2113432-2113473 6 csw FBtr0070378|FBtr0333260|FBtr0070379|FBtr0070380 2111800|2111800|2111732|2111800 2113664|2115701|2115701|2113664 GTGCAA 6mer3-8 dme-miR-92b-3p X + 2113433 2113502 3'utr csw FlyBase G44065.1 AGCAGCGAAATGTAAATCAATTAGATTATTGTGCAAATTTGAGTAATATATTTAAAACATACCCTTATTT 7 2113461 0.986680895 6 7 56 1 1.079181246 0.083333333 0.285714286 0.583333333 7 0 0 12 X:2113433-2113502 6 3.5 2792 FBgn0000382 593.5233333 15.53 24.04 0.005896988 0.225370251 0.145590682 2 2 2 0.25 dme-miR-34-5p 7mer-A1 ACTGCCA X 2116135 2116141 - X_2116135_2116141_- 0.819997714 0.820825528 0.820411621 0.000585343 ph-d FBtr0070433|FBtr0112843 2115725|2115725 2116865|2116865 X - 2116076 2116202 3'utr ph-d FlyBase G64261.1 TAGCAAGAGGGGTAATATCGTAGCTCAAATGACAGGACGCCACATGTATGATAGAGCATAGACTGCCATCCCAGTCATCAATTCATCACTTTGTATAGAAGTTCACAATTACTCATAATCACTAACG 1317 2116144 0.919919228 17 1284 5161 0.973951715 2.583482164 0.195679797 0.1579347 0.295425667 1317 38 3 1533 X:2116076-2116202 7 ph-d FBtr0070433|FBtr0112843 2115725|2115725 2116865|2116865 ACTGCCA 7mer-A1 dme-miR-34-5p X - 2116120 2116337 3'utr ph-d FlyBase G48452.2 TGACCATGCTGATCTCCCACGACCTTTGCATGGACCTTTGCCTACCTGTGGACCGGGTCCAACCGGGTCTGCCACCCAAGCTGAATTTGATTCACTTGAAGCGGACTTTCAATCCTTTTGTACGTAATCTAAACATAGCAAGAGGGGTAATATCGTAGCTCAAATGACAGGACGCCACATGTATGATAGAGCATAGACTGCCATCCCAGTCATCAATT 834 2116144 0.9406239 25 814 3229 0.978613569 2.423900919 0.205752212 0.42206235 0.644542773 834 25 4 1327 X:2116120-2116337 7 653 2793 FBgn0004860 503.0533333 10.12666667 15.45333333 1.2980731 64.48321264 42.25625539 3 3 3 0.25 dme-miR-1006-3p 7mer-A1 GAATTTA X 21205343 21205349 - X_21205343_21205349_- 0.624861949 0.388521665 0.506691807 0.167117758 CG32521 FBtr0077234|FBtr0331815|FBtr0077235|FBtr0331813|FBtr0310652 21205308|21205308|21205308|21205308|21205308 21205682|21205682|21205682|21205682|21205682 X - 21205340 21205367 3'utr CG32521 FlyBase G69392.1 AGAAAAGTAACTGATATTGAATTTAAAC 5 21205351 0.676871954 4 5 32 1 0.84509804 0.428571429 0.4 0.571428571 5 0 0 7 X:21205340-21205367 7 CG32521 FBtr0331813|FBtr0077235|FBtr0077234|FBtr0331815|FBtr0310652 21205308|21205308|21205308|21205308|21205308 21205682|21205682|21205682|21205682|21205682 GAATTTA 7mer-A1 dme-miR-1006-3p X - 21205340 21205371 3'utr CG32521 FlyBase G52181.1 AAATAGAAAAGTAACTGATATTGAATTTAAAC 5 21205351 0.890154572 3 4 25 1 0.84509804 0 0.4 0.571428571 5 0 0 7 X:21205340-21205371 7 4.5 2794 FBgn0052521 337.9966667 23.82333333 36.18 0.013313741 0.188890444 0.124378109 2 2 2 0.25 dme-miR-1012-3p 6mer3-8 TTGACT X 2126635 2126640 - X_2126635_2126640_- 0.649481083 0.725314363 0.687397723 0.053622241 ph-p FBtr0301515|FBtr0343589|FBtr0070432|FBtr0345598 2126208|2126208|2126208|2126208 2126808|2126808|2126808|2126808 X - 2126626 2126655 3'utr ph-p FlyBase G64274.1 CAGGTCTTAAACCCATTGACTTTGTACATA 10 2126640 0.750495144 2 10 79 1 1.113943352 0 0.2 0.384615385 10 0 0 13 X:2126626-2126655 6 ph-p FBtr0301515|FBtr0343589|FBtr0070432|FBtr0345598 2126208|2126208|2126208|2126208 2126808|2126808|2126808|2126808 TTGACT 6mer3-8 dme-miR-1012-3p X - 2126621 2126663 3'utr ph-p FlyBase G48460.1 CAGGCCATCAGGTCTTAAACCCATTGACTTTGTACATACTCCC 14 2126639 0.813840302 6 14 105 1 1.361727836 0.217391304 0.5 0.695652174 14 0 0 23 X:2126621-2126663 6 11.5 2795 FBgn0004861 584.37 11.91 18.33 0.019679313 0.965575147 0.627386798 0 -1 -0.5 0.25 dme-bantam-3p 7mer-m8 TGATCTC X 2126772 2126778 - X_2126772_2126778_- 0.576728738 0.652321301 0.614525019 0.05345204 ph-p FBtr0301515|FBtr0343589|FBtr0070432|FBtr0345598 2126208|2126208|2126208|2126208 2126808|2126808|2126808|2126808 X - 2126748 2126817 stop_codon ph-p FlyBase G64275.2 GCGCAGTAGGGCAGCTAGAGCACGAAAAGCCGAAAAAGATGATCTCCTAACCGAGCAGTGGACCTGGTTC 187 2126778 0.926166365 4 177 612 0.953051643 1.705436047 0.192488263 0.117647059 0.225352113 187 7 3 203 X:2126748-2126817 7 ph-p FBtr0301515|FBtr0343589|FBtr0070432|FBtr0345598 2126208|2126208|2126208|2126208 2126808|2126808|2126808|2126808 TGATCTC 7mer-m8 dme-bantam-3p X - 2126700 2126821 stop_codon ph-p FlyBase G48461.1 AGGAGCGCAGTAGGGCAGCTAGAGCACGAAAAGCCGAAAAAGATGATCTCCTAACCGAGCAGTGGACCTGGTTCAACCAAGTCTGTCGTGCCAGGTGATTCTGATTCAATCGGGCAGGCGAA 134 2126778 0.877258461 11 130 472 0.972826087 1.65079304 0.135869565 0.298507463 0.489130435 134 2 3 179 X:2126700-2126821 7 151.5 2796 FBgn0004861 584.37 11.91 18.33 0.259253555 12.72040302 8.265139116 0 0 0 0.25 dme-miR-252-5p 8mer-m1 GTACTTAG X 21292425 21292432 - X_21292425_21292432_- 0.529982082 0.472461313 0.501221697 0.040673348 CG1718 FBtr0306679 21292306 21293337 X - 21292396 21292448 3'utr CG1718 FlyBase G69406.1 GTGTATTTATTTCGATGTACTTAGACCGGCTTACCAAAGCGTGTAAATAAGTC 33 21292433 0.753608723 4 33 234 1 1.556302501 0.083333333 0.090909091 0.166666667 33 0 0 36 X:21292396-21292448 8 CG1718 FBtr0306679 21292306 21293337 GTACTTAG 8mer-m1 dme-miR-252-5p X - 21292404 21292449 3'utr CG1718 FlyBase G52188.1 TGTGTATTTATTTCGATGTACTTAGACCGGCTTACCAAAGCGTGTA 32 21292433 0.738927434 4 31 223 0.97826087 1.653212514 0.043478261 0.3125 0.52173913 32 1 0 45 X:21292404-21292449 8 32 2797 FBgn0031170 761.1566667 13.58333333 20.66333333 0.042041279 2.355828221 1.548636877 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 21292709 21292714 - X_21292709_21292714_- 0.956321327 0.984328264 0.970324796 0.01980394 CG1718 FBtr0306679|FBtr0306679|FBtr0306679 21292306|21292306|21292306 21293337|21293337|21293337 X - 21292660 21292935 stop_codon CG1718 FlyBase G69408.1 TCCAGTCGCCTCTCGGAATTGAGGAAGCTGTGCAAGTGCCTGCTAACTAATGAGTTTTGAACCAACTACCTGAGCGGGTCCGTTACGATCCGATTTTCACCTGATCTTACACTCACAGATAATAATGTTGTATACCAAAGCAACGCCGATGCCTGAACAGCTAACAAATAGTTTCTAAGCTCGACCTGACAATAGATAGCAGCTATTATGCCTTATTTCATTGTGATCATCTAGCGAAATTTGCACCAAACGACGAGAGATCTTTAATTTTTATGT 238 21292715 0.984718201 43 227 1827 0.95532646 1.489802286 0.18556701 0.18907563 0.336769759 238 5 8 278 X:21292660-21292935 6 CG1718 FBtr0306679|FBtr0306679|FBtr0306679 21292306|21292306|21292306 21293337|21293337|21293337 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 21292659 21292897 stop_codon CG1718 FlyBase G52191.1 CCTGCTAACTAATGAGTTTTGAACCAACTACCTGAGCGGGTCCGTTACGATCCGATTTTCACCTGATCTTACACTCACAGATAATAATGTTGTATACCAAAGCAACGCCGATGCCTGAACAGCTAACAAATAGTTTCTAAGCTCGACCTGACAATAGATAGCAGCTATTATGCCTTATTTCATTGTGATCATCTAGCGAAATTTGCACCAAACGACGAGAGATCTTTAATTTTTATGTA 168 21292715 0.984176359 41 155 1237 0.906015038 1.603865792 0.112781955 0.392857143 0.616541353 168 20 5 241 X:21292659-21292897 6 70 2798 FBgn0031170 761.1566667 13.58333333 20.66333333 0.091965298 5.153374233 3.387643168 1 1 1 0.25 dme-bantam-3p 6mer3-8 TGATCT X 21327734 21327739 + X_21327734_21327739_+ 0.997768579 0.999751657 0.998760118 0.001402263 CG1486 FBtr0077190|FBtr0077191 21327402|21327402 21328150|21328150 X + 21327670 21327765 3'utr CG1486 FlyBase G63380.1 AGATGATGATGATATGATCCAATTGAATTGCTTTTATGTATTTATATGTATATGGCTATTTCTATGATCTTTTATATATCTCCATTATATATTATA 72 21327734 0.994667713 8 69 949 0.967032967 1.944482672 0 0.180555556 0.351648352 72 3 0 88 X:21327670-21327765 6 CG1486 FBtr0077190|FBtr0077191 21327402|21327402 21328150|21328150 TGATCT 6mer3-8 dme-bantam-3p X + 21327719 21327750 3'utr CG1486 FlyBase G47786.1 ATATGGCTATTTCTATGATCTTTTATATATCT 31 21327734 0.706210673 5 30 374 0.95 1.579783597 0 0.258064516 0.425 31 2 0 38 X:21327719-21327750 6 50 2799 FBgn0031174 458.93 15.08666667 23.13333333 0.108949077 3.314184711 2.161383285 0 0 0 0.25 dme-miR-965-3p 7mer-m8 TACGCTT X 21327843 21327849 + X_21327843_21327849_+ 0.619601461 0.620169024 0.619885242 0.000401283 CG1486 FBtr0077190|FBtr0077191 21327402|21327402 21328150|21328150 X + 21327768 21327858 3'utr CG1486 FlyBase G63381.1 ATTTTACCTTATACTTTACTCCCACCATTATTGTTGATTATGATCAGAGGGAAATGTGCGTAACTTCGTCCTCTTTACGCTTTTATTTTTT 22 21327842 0.990855124 8 21 222 0.931034483 0.954242509 0.068965517 0.318181818 0.482758621 22 0 2 27 X:21327768-21327858 7 CG1486 FBtr0077190|FBtr0077191 21327402|21327402 21328150|21328150 TACGCTT 7mer-m8 dme-miR-965-3p X + 21327825 21327859 3'utr CG1486 FlyBase G47788.1 GCGTAACTTCGTCCTCTTTACGCTTTTATTTTTTT 9 21327842 0.824757672 4 9 99 1 1 0 0.111111111 0.2 9 0 0 10 X:21327825-21327859 7 12 2800 FBgn0031174 458.93 15.08666667 23.13333333 0.026147779 0.795404331 0.518731988 1 1 1 0.25 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC X 21344955 21344960 + X_21344955_21344960_+ 0.944422295 0.9763159 0.960369097 0.022552181 fliI FBtr0077192 21344184 21345088 X + 21344907 21345041 3'utr fliI FlyBase G63405.1 ATATATATATATATACATACGCTGAGCTGAGAGGATTACTCCCCTGTGCTAGTCCTTTTAAAATGTTAACCTACTTAAAGCTAGCCTGTAATAAAGTCAAGGAAGCACTAAAACTAATTGTACAAATGCCCACGT 69 21344953 0.962612703 14 64 514 0.912087912 1.618048097 0.021978022 0.217391304 0.406593407 69 7 1 83 X:21344907-21345041 6 fliI FBtr0077192 21344184 21345088 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" X + 21344908 21344975 3'utr fliI FlyBase G47802.1 TATATATATATATACATACGCTGAGCTGAGAGGATTACTCCCCTGTGCTAGTCCTTTTAAAATGTTAA 41 21344953 0.894726351 6 37 323 0.936507937 1.293730757 0.031746032 0.414634146 0.619047619 41 2 2 59 X:21344908-21344975 6 43 2801 FBgn0000709 400.18 10.03 15.43 0.107451647 4.287138584 2.786779002 2 2 2 0.25 dme-miR-968-5p 8mer-A1 ACTACTTA X 21346812 21346819 + X_21346812_21346819_+ 0.529331774 0.428125515 0.478728644 0.071563661 dod FBtr0077193 21346430 21346858 X + 21346760 21346836 3'utr dod FlyBase G63411.1 AAAGGGAATCGCAATTAGGAATTGGAATCTGAGTGAAGCTGTTTACTTTGCGACTACTTATTTATTAGACTAAAGCT 13 21346808 0.991094785 7 11 114 0.857142857 1.079181246 0.142857143 0.076923077 0.142857143 13 2 0 12 X:21346760-21346836 8 dod FBtr0077193 21346430 21346858 ACTACTTA 8mer-A1 dme-miR-968-5p X + 21346755 21346834 3'utr dod FlyBase G47807.1 AAGGGAAAGGGAATCGCAATTAGGAATTGGAATCTGAGTGAAGCTGTTTACTTTGCGACTACTTATTTATTAGACTAAAG 9 21346782 0.984918386 5 9 76 1 1.079181246 0.416666667 0.222222222 0.416666667 9 0 0 12 X:21346755-21346834 8 6.5 2802 FBgn0015379 457.9566667 55.63 84.90666667 0.014193483 0.11684343 0.076554648 4 30 17 0.25 dme-miR-276a-3p 7mer-A1 GTTCCTA X 21354267 21354273 + X_21354267_21354273_+ 0.731411865 0.798107715 0.76475979 0.047161052 sol FBtr0089679 21354101 21357912 X + 21354243 21354291 3'utr sol FlyBase G63418.1 GTAAGATGTGGATATGCATCAAATGTTCCTATGCCTACAACCGACTCTG 25 21354266 0.782480123 3 25 182 1 1.462397998 0.172413793 0.12 0.24137931 25 0 0 29 X:21354243-21354291 7 sol FBtr0089679 21354101 21357912 GTTCCTA 7mer-A1 dme-miR-276a-3p X + 21354247 21354305 3'utr sol FlyBase G47814.1 GATGTGGATATGCATCAAATGTTCCTATGCCTACAACCGACTCTGGCTCCAGACTTGCG 13 21354266 0.760785556 6 13 84 1 1.255272505 0.277777778 0.307692308 0.5 13 0 0 18 X:21354247-21354305 7 17.5 2803 FBgn0003464 838.5366667 18.14666667 27.72333333 0.02086969 0.964364438 0.631237225 1 1 1 0.25 dme-miR-263a-5p 6mer2-7 TGCCAT X 21355764 21355769 + X_21355764_21355769_+ 0.830186501 0.80638802 0.818287261 0.016828081 sol FBtr0089679 21354101 21357912 X + 21355729 21355784 3'utr sol FlyBase G63421.1 CGGCAAGTGGACGACGGTGCTGGTGGATGATCTGCTGCCATGCGACAAGCGTGGCC 13 21355756 0.721381707 3 12 81 0.928571429 1.113943352 0.428571429 0.076923077 0.142857143 13 1 0 13 X:21355729-21355784 6 sol FBtr0089679 21354101 21357912 TGCCAT 6mer2-7 dme-miR-263a-5p X + 21355740 21355773 3'utr sol FlyBase G47817.1 CGACGGTGCTGGTGGATGATCTGCTGCCATGCGA 5 21355757 0.705691392 3 5 32 1 0.698970004 0.2 0 0 5 0 0 5 X:21355740-21355773 6 8.5 2804 FBgn0003464 838.5366667 18.14666667 27.72333333 0.010136706 0.468405584 0.306600938 8 7 7.5 0.25 dme-miR-307a-3p 8mer-A1 GGTTGTGA X 21357059 21357066 + X_21357059_21357066_+ 0.588385736 0.584823089 0.586604412 0.002519139 sol FBtr0089679 21354101 21357912 X + 21357033 21357130 intron-3'utr sol FlyBase G63427.1 TTTCCTTTACAGGGCTGGGCGGGTCTGGTTGTGATGGTGGAAAATAGACATGAGAATAAGTGGATCCATGTGAAATGTGATTGCCAGGAGAGCTACAA 96 21357058 0.956625751 10 91 551 0.947826087 1.736396502 0.460869565 0.166666667 0.304347826 96 5 1 109 X:21357033-21357130 8 sol FBtr0089679 21354101 21357912 GGTTGTGA 8mer-A1 dme-miR-307a-3p X + 21357043 21357140 intron-3'utr sol FlyBase G47823.1 AGGGCTGGGCGGGTCTGGTTGTGATGGTGGAAAATAGACATGAGAATAAGTGGATCCATGTGAAATGTGATTGCCAGGAGAGCTACAATGTGGTGTCG 67 21357058 0.962499778 12 63 370 0.933962264 1.217483944 0.5 0.432835821 0.641509434 67 2 5 99 X:21357043-21357140 8 45.5 2805 FBgn0003464 838.5366667 18.14666667 27.72333333 0.054261193 2.507347539 1.641216785 1 1 1 0.25 dme-miR-317-3p 6mer3-8 TGTGTT X 21361347 21361352 + X_21361347_21361352_+ 0.981567584 0.999993509 0.990780546 0.013029079 1-Sep FBtr0077198 21360837 21361688 X + 21361184 21361381 3'utr 1-Sep FlyBase G63439.1 CTTCTATCAAGCGAAACCACACACGAAAACAATTGTATTCCTATTATGTATTTAGACGCGATTAACAATGAATTATTATTGTAATACGCATCTAGGCTAAGCGAATCCAATCCGATTTATATTGTATGTTAATTCATTTTTGTCTGTTTACCTTACCCTTATCTGTGTTGTCTCAAAGCGAGCAATTTATTTAGGTTA 115 21361336 0.990917614 28 107 1107 0.9375 1.829303773 0.215277778 0.208695652 0.368055556 115 8 1 135 X:21361184-21361381 6 1-Sep FBtr0077198 21360837 21361688 TGTGTT 6mer3-8 dme-miR-317-3p X + 21361320 21361370 3'utr 1-Sep FlyBase G47833.1 TTTTTGTCTGTTTACCTTACCCTTATCTGTGTTGTCTCAAAGCGAGCAATT 52 21361336 0.835280442 10 46 498 0.894736842 1.355387658 0.157894737 0.365384615 0.565789474 52 6 2 68 X:21361320-21361370 6 51.5 2806 FBgn0011710 1695 101.9 156.09 0.030383481 0.505397448 0.329937856 11 11 11 0.25 dme-miR-980-3p 7mer-A1 GCAGCTA X 2150460 2150466 - X_2150460_2150466_- 0.823283745 0.823071314 0.82317753 0.000150189 wapl FBtr0070430|FBtr0344159|FBtr0070429 2150105|2149934|2150105 2150876|2150876|2150876 X - 2150437 2150477 3'utr wapl FlyBase G64288.1 AAGCAATATTAGCAGCTAAATGTCGGCTTACCCTCGAAAGC 15 2150449 0.696462347 5 13 78 0.761904762 1.204119983 0 0.333333333 0.523809524 15 5 0 16 X:2150437-2150477 7 wapl FBtr0070430|FBtr0344159|FBtr0070429 2150105|2149934|2150105 2150876|2150876|2150876 GCAGCTA 7mer-A1 dme-miR-980-3p X - 2150437 2150488 3'utr wapl FlyBase G48468.1 TATATAGTCATAAGCAATATTAGCAGCTAAATGTCGGCTTACCCTCGAAAGC 9 2150468 0.954417298 4 9 43 1 1.041392685 0.181818182 0.222222222 0.363636364 9 0 0 11 X:2150437-2150488 7 9.5 2807 FBgn0004655 814.8266667 14.46333333 22.20666667 0.011658921 0.656833372 0.42779946 -17 2 -7.5 0.25 dme-miR-980-3p 7mer-m8 GGCAGCT X 2172015 2172021 + X_2172015_2172021_+ 0.573718376 0.384168986 0.478943681 0.134031666 CG3630 FBtr0310076|FBtr0310500|FBtr0070385|FBtr0310501 2171927|2171927|2171927|2171927 2172281|2172281|2172281|2172281 X + 2171989 2172027 3'utr CG3630 FlyBase G58268.1 AAAGGAACTCTCGCAACTACTAAAGCGGCAGCTTTAAAT 7 2171999 0.692169268 3 6 27 0.888888889 0.903089987 0 0.285714286 0.444444444 7 1 0 8 X:2171989-2172027 7 CG3630 FBtr0070385|FBtr0310501|FBtr0310076|FBtr0310500 2171927|2171927|2171927|2171927 2172281|2172281|2172281|2172281 GGCAGCT 7mer-m8 dme-miR-980-3p X + 2171988 2172028 3'utr CG3630 FlyBase G44082.1 AAAAGGAACTCTCGCAACTACTAAAGCGGCAGCTTTAAATT 5 2172022 0.958119426 2 4 28 0.8 0.602059991 0 0 0 5 1 0 4 X:2171988-2172028 7 4.5 2808 FBgn0023540 152.6666667 11.14666667 17.14333333 0.029475983 0.403708134 0.262492709 16 -7 4.5 0.25 dme-miR-14-3p 7mer-A1 AGACTGA X 2237462 2237468 + X_2237462_2237468_+ 0.750505448 0.754559264 0.752532356 0.00286654 pcx FBtr0342766|FBtr0332381|FBtr0344153 2236594|2236594|2236594 2238045|2238045|2237961 X + 2237358 2237517 3'utr pcx FlyBase G58321.1 CTAAGATATTACACACAATTCCTAGATGATTAAGAGGATGAGGATGAGGACGAGGATCAAGTGGAATGACGACATGTAAAGCTCTCACGTTGCCTTAATATATTAGACTGATTTTTTCTACACACATTTGTAGACGTATGGTGGATGACATTTGAGAAGT 305 2237460 0.992172243 30 298 3345 0.977591036 2.241795431 0.019607843 0.144262295 0.268907563 305 7 1 349 X:2237358-2237517 7 pcx FBtr0344153|FBtr0342766|FBtr0332381 2236594|2236594|2236594 2237961|2238045|2238045 AGACTGA 7mer-A1 dme-miR-14-3p X + 2237398 2237514 3'utr pcx FlyBase G44118.1 AGGATGAGGACGAGGATCAAGTGGAATGACGACATGTAAAGCTCTCACGTTGCCTTAATATATTAGACTGATTTTTTCTACACACATTTGTAGACGTATGGTGGATGACATTTGAGA 142 2237460 0.991576035 18 137 1481 0.97235023 2.02325246 0.02764977 0.366197183 0.585253456 142 5 1 211 X:2237398-2237514 7 194.5 2809 FBgn0003048 2230.713333 22.34666667 34.36666667 0.08719184 8.70375895 5.659553831 2 2 2 0.25 dme-miR-1012-3p 6mer3-8 TTGACT X 22447570 22447575 - X_22447570_22447575_- 0.972279007 0.90853707 0.940408038 0.04507233 CG14615 FBtr0339499 22447181 22447925 X - 22447543 22447583 3'utr CG14615 FlyBase G69539.1 ACGCACTTTTGACTGAATCAAATTTGACATTTTCGAGTTAA 7 22447560 0.775937663 3 6 46 0.9 0.954242509 0.1 0.428571429 0.6 7 1 0 9 X:22447543-22447583 6 CG14615 FBtr0339499 22447181 22447925 TTGACT 6mer3-8 dme-miR-1012-3p X - 22447534 22447589 3'utr CG14615 FlyBase G52298.1 TATATTACGCACTTTTGACTGAATCAAATTTGACATTTTCGAGTTAATTAGCTAAA 16 22447576 0.984620951 5 14 115 0.913043478 1.322219295 0.130434783 0.25 0.47826087 16 2 0 21 X:22447534-22447589 6 9.5 2810 FBgn0031184 46.76333333 3.326666667 5.086666667 0.203150617 2.855711423 1.867627785 -15 1 -7 0.25 dme-miR-33-5p 8mer-A1 CAATGCAA X 22447609 22447616 + X_22447609_22447616_+ 0.574114799 0.596923249 0.585519024 0.016127974 CG14621 FBtr0339557 22446988 22447808 X + 22447562 22447635 3'utr CG14621 FlyBase G63513.1 TTTGATTCAGTCAAAAGTGCGTAATATATGTATATATACCTAGAATGCAATGCAATGCTGTAAATAAAATGTAT 14 22447617 0.890200114 5 12 104 0.928571429 1.113943352 0.214285714 0 0 14 1 0 13 X:22447562-22447635 8 CG14621 FBtr0339557 22446988 22447808 CAATGCAA 8mer-A1 dme-miR-33-5p X + 22447549 22447626 3'utr CG14621 FlyBase G47882.1 CGAAAATGTCAAATTTGATTCAGTCAAAAGTGCGTAATATATGTATATATACCTAGAATGCAATGCAATGCTGTAAAT 13 22447608 0.974828724 7 12 76 1 1.380211242 0.208333333 0.461538462 0.708333333 13 0 0 24 X:22447549-22447626 8 9 2811 FBgn0031183 252.9033333 14.79333333 22.64 0.03558672 0.608382154 0.397526502 -8 1 -3.5 0.25 dme-miR-184-5p 7mer-A1 GATAAGA X 22452192 22452198 - X_22452192_22452198_- 0.775837354 0.782909671 0.779373512 0.005000871 wap FBtr0309240|FBtr0339498|FBtr0305147|FBtr0077368 22451554|22451443|22451554|22451998 22453229|22453229|22453229|22453229 X - 22452164 22452222 3'utr wap FlyBase G69546.1 AGCAAACAAACTATGATCATTTCAGATAAGACACGACCCTCCATCAATAATCTCAAATC 10 22452209 0.965462633 5 10 53 1 1.079181246 0.083333333 0.2 0.333333333 10 0 0 12 X:22452164-22452222 7 wap FBtr0305147|FBtr0077368|FBtr0309240|FBtr0339498 22451554|22451998|22451554|22451443 22453229|22453229|22453229|22453229 GATAAGA 7mer-A1 dme-miR-184-5p X - 22452164 22452219 3'utr wap FlyBase G52303.1 AAACAAACTATGATCATTTCAGATAAGACACGACCCTCCATCAATAATCTCAAATC 6 22452209 0.973455655 5 6 34 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 X:22452164-22452219 7 5 2812 FBgn0266848 2356.2 87.30666667 134.59 0.002122061 0.057269395 0.037149863 11 11 11 0.25 dme-miR-14-3p 6mer3-8 AAGACT X 2245896 2245901 + X_2245896_2245901_+ 0.830614922 0.916674262 0.873644592 0.060853185 fs(1)K10 FBtr0070396 2244551 2246041 X + 2245852 2245917 3'utr fs(1)K10 FlyBase G58331.1 AACCCTCAGGTAGCAAAGTAATTTAATTGCAAATAGAGAGTCCTAAGACTAAATAATATATTTAAA 23 2245894 0.856266736 6 16 146 0.730769231 0.801632346 0 0.130434783 0.230769231 23 5 2 19 X:2245852-2245917 6 fs(1)K10 FBtr0070396 2244551 2246041 AAGACT 6mer3-8 dme-miR-14-3p X + 2245876 2245908 3'utr fs(1)K10 FlyBase G44121.1 AATTGCAAATAGAGAGTCCTAAGACTAAATAAT 11 2245895 0.732514331 3 7 60 0.692307692 0.954242509 0 0.181818182 0.307692308 11 4 0 9 X:2245876-2245908 6 15.5 2813 FBgn0000810 232.2533333 9.176666667 14.05666667 0.066737471 1.689066473 1.10267963 2 1 1.5 0.25 dme-miR-980-5p 7mer-A1 AAAAACA X 22474911 22474917 - X_22474911_22474917_- 0.600316682 0.511923745 0.556120214 0.06250329 CG12576 FBtr0077366|FBtr0346429|FBtr0077365|FBtr0335046 22474849|22474849|22474849|22474849 22475730|22475730|22475730|22475730 X - 22474904 22474996 3'utr CG12576 FlyBase G69567.1 TTGTATTCTTATTATTATTTGCGCTTAAAATACATAAGTTATCATTTAAATTGCGAAACAAAACGAAATGTGATTTTGTAAAAACAAAAACTG 95 22474922 0.894943606 13 92 605 0.991869919 2.086359831 0.18699187 0.252631579 0.422764228 95 1 0 122 X:22474904-22474996 7 CG12576 FBtr0335046|FBtr0077365|FBtr0346429|FBtr0077366 22474849|22474849|22474849|22474849 22475730|22475730|22475730|22475730 AAAAACA 7mer-A1 dme-miR-980-5p X - 22474903 22474992 3'utr CG12576 FlyBase G52319.1 ATTCTTATTATTATTTGCGCTTAAAATACATAAGTTATCATTTAAATTGCGAAACAAAACGAAATGTGATTTTGTAAAAACAAAAACTGA 62 22474922 0.964621739 7 60 382 0.989583333 1.977723605 0.15625 0.387096774 0.604166667 62 1 0 95 X:22474903-22474992 7 32.5 2814 FBgn0031190 668.0366667 33.82666667 51.78333333 0.048650024 0.960780449 0.627615063 5 5 5 0.25 dme-miR-1008-3p 7mer-A1 GCTGTGA X 22475270 22475276 - X_22475270_22475276_- 0.508020785 0.36303294 0.435526862 0.102521927 CG12576 FBtr0077366|FBtr0346429|FBtr0077365|FBtr0335046 22474849|22474849|22474849|22474849 22475730|22475730|22475730|22475730 X - 22475246 22475294 3'utr CG12576 FlyBase G69570.1 ATGGTTTATTTTGATGTCGCTGTGAGTGAGGGCGTTAGCTACTTAATCT 7 22475268 0.989153587 4 6 63 0.888888889 0.903089987 0.111111111 0.142857143 0.333333333 7 1 0 8 X:22475246-22475294 7 CG12576 FBtr0335046|FBtr0077365|FBtr0346429|FBtr0077366 22474849|22474849|22474849|22474849 22475730|22475730|22475730|22475730 GCTGTGA 7mer-A1 dme-miR-1008-3p X - 22475253 22475284 3'utr CG12576 FlyBase G52321.1 TTGATGTCGCTGTGAGTGAGGGCGTTAGCTAC 9 22475269 0.798154435 4 9 51 1 1.113943352 0.461538462 0.222222222 0.461538462 9 0 0 13 X:22475253-22475284 7 8 2815 FBgn0031190 668.0366667 33.82666667 51.78333333 0.011975391 0.236499803 0.154489862 -8 -7 -7.5 0.25 dme-miR-283-5p 8mer-A1 TGATATTA X 2264611 2264618 + X_2264611_2264618_+ 0.514140854 0.569894076 0.542017465 0.039423466 CG3071 FBtr0070398 2264570 2264825 X + 2264585 2264645 3'utr CG3071 FlyBase G58340.1 AGAACAACGATATAGCCACATAGCTTTGATATTAAGTATATAAGTAGTAGTAGTTTAAGTA 12 2264597 0.880785553 5 10 93 0.8 0.602059991 0 0.25 0.4 12 1 2 12 X:2264585-2264645 8 CG3071 FBtr0070398 2264570 2264825 TGATATTA 8mer-A1 dme-miR-283-5p X + 2264579 2264621 3'utr CG3071 FlyBase G44124.1 CGACGTAGAACAACGATATAGCCACATAGCTTTGATATTAAGT 6 2264609 0.971427869 3 6 35 1 0.954242509 0 0.5 0.666666667 6 0 0 9 X:2264579-2264621 8 7.5 2816 FBgn0023527 429.3266667 27.48 42.32666667 0.017469215 0.272925764 0.177193259 14 2 8 0.25 dme-miR-34-5p 7mer-m8 CACTGCC X 2265654 2265660 - X_2265654_2265660_- 0.403154451 0.497043648 0.450099049 0.066389619 CG2924 FBtr0345315|FBtr0346648|FBtr0070412|FBtr0300793 2264989|2264655|2264989|2264989 2265784|2265784|2265784|2265784 X - 2265639 2265711 3'utr CG2924 FlyBase G64367.1 CACACCGCCAAAATTAGCCTGTCCACATCCGCCAAGCACACATCCCGCACTCACTGCCGGCTTGATCTGATAT 13 2265661 0.945534193 3 13 55 1 1.146128036 0 0.076923077 0.142857143 13 0 0 14 X:2265639-2265711 7 CG2924 FBtr0070412|FBtr0300793|FBtr0345315|FBtr0346648 2264989|2264989|2264989|2264655 2265784|2265784|2265784|2265784 CACTGCC 7mer-m8 dme-miR-34-5p X - 2265642 2265674 3'utr CG2924 FlyBase G48513.1 ACACATCCCGCACTCACTGCCGGCTTGATCTGA 6 2265661 0.851107621 2 5 28 0.666666667 0.77815125 0 0.333333333 0.555555556 6 3 0 6 X:2265642-2265674 7 7 2817 FBgn0023528 1233.12 56.31666667 86.87 0.005676658 0.124297129 0.080580177 1 1 1 0.25 dme-bantam-3p 6mer3-8 TGATCT X 2271138 2271143 - X_2271138_2271143_- 0.79730126 0.80262655 0.799963905 0.003765485 CG2918 FBtr0300792 2271006 2271490 X - 2271120 2271236 3'utr CG2918 FlyBase G64374.1 ATTTTCCATTTCCATACCATTCCGCATAGGAAATACAAGACTTGAAGAAGTACTCACACGGTCCCCTCTATATGTATATCCACTATATCTTATTGATCTATTGTAGCGAAAGTAGCG 60 2271143 0.877547231 14 54 437 0.916666667 1.51851394 0.069444444 0.116666667 0.263888889 60 5 1 66 X:2271120-2271236 6 CG2918 FBtr0300792 2271006 2271490 TGATCT 6mer3-8 dme-bantam-3p X - 2271081 2271165 3'utr CG2918 FlyBase G48517.1 ATGTATATCCACTATATCTTATTGATCTATTGTAGCGAAAGTAGCGAAACGAATTGGGCGGGATGAGTTAATTGCCGAGATAAGA 29 2271143 0.992766432 6 24 271 0.871794872 0.832508913 0.025641026 0.24137931 0.435897436 29 1 4 34 X:2271081-2271165 6 26.5 2818 FBgn0023529 3854.556667 145.7 223.8466667 0.00687498 0.181880577 0.118384609 0 0 0 0.25 dme-miR-1008-3p 7mer-A1 GCTGTGA X 2280400 2280406 - X_2280400_2280406_- 0.544070572 0.609338634 0.576704603 0.046151445 CG2865 FBtr0332962 2278029 2281577 X - 2280371 2280432 3'utr CG2865 FlyBase G64396.2 AAATTTTTTCTTCGAAAAAAATTACGGCTGTGATAGAATTTTAAGTTTTTGGCTAAACAAAA 196 2280410 0.776511659 16 157 1700 0.814814815 1.291270158 0.268518519 0.102040816 0.185185185 196 32 8 176 X:2280371-2280432 7 CG2865 FBtr0332962 2278029 2281577 GCTGTGA 7mer-A1 dme-miR-1008-3p X - 2280364 2280429 3'utr CG2865 FlyBase G48532.1 TTTTTTCTTCGAAAAAAATTACGGCTGTGATAGAATTTTAAGTTTTTGGCTAAACAAAAAAAGAAG 158 2280411 0.989003778 15 135 1352 0.882629108 1.672097858 0.248826291 0.259493671 0.450704225 158 22 3 188 X:2280364-2280429 7 173.5 2819 FBgn0023526 330.04 10.34 15.85333333 0.525693855 16.7794971 10.94407065 4 5 4.5 0.25 dme-miR-33-5p 8mer-A1 CAATGCAA X 2280802 2280809 - X_2280802_2280809_- 0.617527546 0.596609539 0.607068542 0.01479126 CG2865 FBtr0332962 2278029 2281577 X - 2280789 2280827 3'utr CG2865 FlyBase G64400.1 AAACAAAAAAAAAACAAACAATGCAAGGTTTCATTTATT 50 2280806 0.922489444 3 49 172 1 1.785329835 0 0.1 0.262295082 50 0 0 61 X:2280789-2280827 8 CG2865 FBtr0332962 2278029 2281577 CAATGCAA 8mer-A1 dme-miR-33-5p X - 2280790 2280826 3'utr CG2865 FlyBase G48534.1 AACAAAAAAAAAACAAACAATGCAAGGTTTCATTTAT 30 2280806 0.915976108 2 29 98 0.976744186 1.62324929 0 0.333333333 0.534883721 30 1 0 42 X:2280790-2280826 8 39.5 2820 FBgn0023526 330.04 10.34 15.85333333 0.119682463 3.820116054 2.491589571 -3 -3 -3 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA X 2280908 2280914 - X_2280908_2280914_- 0.808993605 0.582699095 0.69584635 0.160014375 CG2865 FBtr0332962 2278029 2281577 X - 2280899 2280932 3'utr CG2865 FlyBase G64401.1 AAAACCTCCGAAGTTCTCCTAGTCATACAAAAAA 7 2280916 0.624495836 4 7 38 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 X:2280899-2280932 7 CG2865 FBtr0332962 2278029 2281577 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X - 2280902 2280929 3'utr CG2865 FlyBase G48535.1 ACCTCCGAAGTTCTCCTAGTCATACAAA 5 2280907 0.92735952 2 5 27 1 0.903089987 0.25 0.4 0.625 5 0 0 8 X:2280902-2280929 7 6 2821 FBgn0023526 330.04 10.34 15.85333333 0.018179615 0.580270793 0.378469302 2 -7 -2.5 0.25 dme-miR-305-5p 7mer-A1 GTACAAA X 2281375 2281381 - X_2281375_2281381_- 0.734348713 0.728876144 0.731612428 0.003869713 CG2865 FBtr0332962 2278029 2281577 X - 2281340 2281456 3'utr CG2865 FlyBase G64402.1 ATTATTATATAGGAAGGAGCAGGAAGATGATCGGGCGGATTGGCCAGTATTACTCATTAATGGCAGTCGCGATTTGTACAAACAAAAATACACAAAAAATTAGTTGTAGGCAATTGA 92 2281383 0.968749913 18 86 476 0.940594059 1.375663614 0.188118812 0.086956522 0.168316832 92 3 3 95 X:2281340-2281456 7 CG2865 FBtr0332962 2278029 2281577 GTACAAA 7mer-A1 dme-miR-305-5p X - 2281346 2281499 3'utr CG2865 FlyBase G48537.1 AAGCGAACATTTAGGCTATGACCCATATGCTAATCTCTAAGCTATTATTATATAGGAAGGAGCAGGAAGATGATCGGGCGGATTGGCCAGTATTACTCATTAATGGCAGTCGCGATTTGTACAAACAAAAATACACAAAAAATTAGTTGTAGGC 70 2281383 0.957083362 14 68 329 0.98245614 1.748188027 0.228070175 0.428571429 0.649122807 70 1 1 112 X:2281346-2281499 7 51 2822 FBgn0023526 330.04 10.34 15.85333333 0.154526724 4.932301741 3.216989066 2 2 2 0.25 dme-miR-277-3p 6mer2-7 GCATTT X 22826469 22826474 - X_22826469_22826474_- 0.980346151 0.786558904 0.883452528 0.137028314 fog FBtr0333180|FBtr0100538|FBtr0333179|FBtr0077342|FBtr0333182|FBtr0333181 22826160|22826160|22826160|22826160|22824315|22826160 22827046|22827046|22827046|22827046|22827046|22827046 X - 22826458 22826505 3'utr fog FlyBase G69600.2 AACTCATATATTCATTGTGCGTACAGTCTGAGCATTTGTTGTATATAC 31 22826485 0.75052404 9 25 213 0.897435897 1.544068044 0.179487179 0.258064516 0.41025641 31 4 0 35 X:22826458-22826505 6 fog FBtr0333182|FBtr0333181|FBtr0333179|FBtr0077342|FBtr0333180|FBtr0100538 22824315|22826160|22826160|22826160|22826160|22826160 22827046|22827046|22827046|22827046|22827046|22827046 GCATTT 6mer2-7 dme-miR-277-3p X - 22826449 22826525 3'utr fog FlyBase G52343.1 ACTACTATTATTACCATTGTAACTCATATATTCATTGTGCGTACAGTCTGAGCATTTGTTGTATATACATTAGTGAA 21 22826485 0.776502947 11 20 164 0.962962963 1.414973348 0.185185185 0.238095238 0.407407407 21 1 0 26 X:22826449-22826525 6 21 2823 FBgn0000719 1767.816667 49.34333333 75.43666667 0.01187906 0.425589408 0.278379214 11 11 11 0.25 dme-miR-308-3p 7mer-m1 TGTGATT X 22826605 22826611 - X_22826605_22826611_- 0.490290361 0.493508163 0.491899262 0.002275328 fog FBtr0333180|FBtr0100538|FBtr0333179|FBtr0077342|FBtr0333182|FBtr0333181 22826160|22826160|22826160|22826160|22824315|22826160 22827046|22827046|22827046|22827046|22827046|22827046 X - 22826565 22826674 3'utr fog FlyBase G69601.2 ACATTACAATAGTTTTATATGTGAGCGCTGCTGTCGCTGTTGCGAGCCTTAGCAATATTTCATTGTGATTACTTAGGCATATGAATTGATCGTTAGACTTAGGAAATCTT 402 22826612 0.878730335 28 349 4105 0.877083333 1.177124064 0.0625 0.167082294 0.304166667 401 32 27 421 X:22826565-22826674 7 fog FBtr0333182|FBtr0333181|FBtr0333179|FBtr0077342|FBtr0333180|FBtr0100538 22824315|22826160|22826160|22826160|22826160|22826160 22827046|22827046|22827046|22827046|22827046|22827046 TGTGATT 7mer-m1 dme-miR-308-3p X - 22826530 22826671 3'utr fog FlyBase G52344.1 TTACAATAGTTTTATATGTGAGCGCTGCTGTCGCTGTTGCGAGCCTTAGCAATATTTCATTGTGATTACTTAGGCATATGAATTGATCGTTAGACTTAGGAAATCTTATTTGTATATCCAGAATCTTTTGATGTATCTTTTT 235 22826612 0.744487624 30 212 2291 0.904494382 1.604765885 0.084269663 0.395744681 0.601123596 235 27 7 322 X:22826530-22826671 7 253 2824 FBgn0000719 1767.816667 49.34333333 75.43666667 0.143114388 5.127339053 3.353806725 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 23012360 23012366 - X_23012360_23012366_- 0.549536703 0.575237319 0.562387011 0.018173069 Rab21 FBtr0299903|FBtr0299903|FBtr0299903|FBtr0336924|FBtr0336924|FBtr0336924|FBtr0111134|FBtr0111134|FBtr0111134 23012138|23012138|23012138|23012138|23012138|23012138|23012138|23012138|23012138 23012376|23012376|23012376|23012376|23012376|23012376|23012376|23012376|23012376 X - 23012343 23012415 stop_codon Rab21 FlyBase G69625.1 GGAGATCCTGCGGGCCAGCGGTCCTGTTGCGGCATTTAGCCGTTCCCATTGTGATAGTAATCATAACTATAAA 97 23012367 0.740996206 12 90 684 0.919354839 1.278753601 0.088709677 0.237113402 0.403225806 97 5 5 114 X:23012343-23012415 7 Rab21 FBtr0111134|FBtr0111134|FBtr0111134|FBtr0336924|FBtr0336924|FBtr0336924|FBtr0299903|FBtr0299903|FBtr0299903 23012138|23012138|23012138|23012138|23012138|23012138|23012138|23012138|23012138 23012376|23012376|23012376|23012376|23012376|23012376|23012376|23012376|23012376 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 23012292 23012416 stop_codon Rab21 FlyBase G52364.1 CGGAGATCCTGCGGGCCAGCGGTCCTGTTGCGGCATTTAGCCGTTCCCATTGTGATAGTAATCATAACTATAAAATAGTAGACCTTTAACCGATGTTGATCTTGTGTATATATTATACATAGATA 94 23012367 0.977557566 19 89 737 0.961538462 1.397940009 0.084615385 0.319148936 0.507692308 94 1 4 125 X:23012292-23012416 7 69 2825 FBgn0039966 49 5.726666667 8.77 1.408163265 12.04889406 7.867730901 1 1 1 0.25 dme-bantam-3p 8mer-A1 TGATCTCA X 23080962 23080969 - X_23080962_23080969_- 0.631033602 0.630890818 0.63096221 0.000100975 CG17163 FBtr0113727|FBtr0309316 23080869|23080757 23081631|23081631 X - 23080920 23081098 3'utr CG17163 FlyBase G69629.1 CTTATATATTTACAAATGTACTTATATATCTTTAAGATAAATAGTGTACACGCCTAGATACACTCCAATTAATTAACTTTGGGTATCGTTCTACGAATTTTGCATACTGGATGTGTATTAAGGTGTATTTGATCTCATTCAATGATATTATTTGTGATGTAACAACTTCAAGGTAATTT 191 23080970 0.991529555 25 180 1950 0.941176471 1.84094208 0.113122172 0.109947644 0.230769231 191 11 2 208 X:23080920-23081098 8 CG17163 FBtr0309316|FBtr0113727 23080757|23080869 23081631|23081631 TGATCTCA 8mer-A1 dme-bantam-3p X - 23080899 23080998 3'utr CG17163 FlyBase G52367.1 TGCATACTGGATGTGTATTAAGGTGTATTTGATCTCATTCAATGATATTATTTGTGATGTAACAACTTCAAGGTAATTTCAATTATTCCCCTAAATGAAA 103 23080970 0.992618809 18 100 1158 0.979452055 2.155336037 0.123287671 0.359223301 0.547945205 103 3 0 143 X:23080899-23080998 8 100.5 2826 FBgn0039942 110.9 8.843333333 13.50666667 0.906221821 11.36449303 7.44076999 1 1 1 0.25 dme-bantam-3p 6mer3-8 TGATCT X 23086405 23086410 - X_23086405_23086410_- 0.880275655 0.379874913 0.630075284 0.353836799 CG17159 FBtr0113717|FBtr0302542 23085729|23084958 23089410|23089410 X - 23086309 23086454 3'utr CG17159 FlyBase G69634.1 ACTTTTCATAGCATTTGGTAGTTGTTAATAGAAATGACATTTGTTGATCTTAACTATACCTGTTACTCTTAGATTAAAAGGTTATACCAAAATCGTTGGAACTATGTATTAGTCAAAAGAAAACGTTGTCGAATAGTAAAGTAAAA 29 23086412 0.991444339 15 26 274 0.911764706 1.491361694 0.205882353 0.172413793 0.294117647 29 3 0 31 X:23086309-23086454 6 CG17159 FBtr0302542|FBtr0113717 23084958|23085729 23089410|23089410 TGATCT 6mer3-8 dme-bantam-3p X - 23086380 23086452 3'utr CG17159 FlyBase G52373.1 TTTTCATAGCATTTGGTAGTTGTTAATAGAAATGACATTTGTTGATCTTAACTATACCTGTTACTCTTAGATT 15 23086410 0.739126445 8 14 149 0.935483871 1.462397998 0.258064516 0.666666667 0.838709677 15 2 0 29 X:23086380-23086452 6 16.5 2827 FBgn0039945 285.31 7.496666667 11.39666667 0.057831832 2.200978213 1.447791752 2 0 1 0.25 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG X 2343442 2343448 + X_2343442_2343448_+ 0.538502485 0.536609071 0.537555778 0.001338836 phl FBtr0344007|FBtr0070401 2343430|2343430 2343870|2343870 X + 2343419 2343493 stop_codon phl FlyBase G58350.1 TGGGAATATCTAGACAGCGACCTGTACCTGTACTTACATATATCCTGCGTGATCAACGTGATCCTACATCTATAT 197 2343441 0.908237134 10 190 1127 0.96812749 2.084576278 0.011952191 0.208121827 0.378486056 197 7 1 243 X:2343419-2343493 7 phl FBtr0344007|FBtr0070401 2343430|2343430 2343870|2343870 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" X + 2343425 2343471 stop_codon phl FlyBase G44131.1 TATCTAGACAGCGACCTGTACCTGTACTTACATATATCCTGCGTGAT 130 2343441 0.905856282 6 126 716 0.961352657 2.298853076 0 0.415384615 0.632850242 130 8 0 199 X:2343425-2343471 7 160 2828 FBgn0003079 445.6666667 16.59666667 25.57666667 0.359012715 9.640490058 6.255701812 1 1 1 0.25 dme-miR-14-3p 6mer3-8 AAGACT X 2444528 2444533 - X_2444528_2444533_- 0.969698883 0.997406544 0.983552713 0.019592232 boi FBtr0070457|FBtr0334883|FBtr0303887|FBtr0303886|FBtr0070458 2444165|2444165|2444165|2444165|2444165 2445050|2445050|2445050|2445050|2445050 X - 2444477 2444607 3'utr boi FlyBase G64423.1 TGCTGCTTCGTTTTGTTTTAGTTAAATATTGAATTTGAAAATATACAAACTTTAGTATAAGGAATTGGTAATGTAAGACTTTTTTCGTTGCTGCCGGCCAGATAGTCAGTAGAATTACTAATGTTAAGTTT 137 2444536 0.990803267 24 129 1338 0.933333333 2.187520721 0.2 0.145985401 0.290909091 137 11 0 154 X:2444477-2444607 6 boi FBtr0303886|FBtr0070458|FBtr0334883|FBtr0303887|FBtr0070457 2444165|2444165|2444165|2444165|2444165 2445050|2445050|2445050|2445050|2445050 AAGACT 6mer3-8 dme-miR-14-3p X - 2444434 2444577 3'utr boi FlyBase G48554.1 GAATTTGAAAATATACAAACTTTAGTATAAGGAATTGGTAATGTAAGACTTTTTTCGTTGCTGCCGGCCAGATAGTCAGTAGAATTACTAATGTTAAGTTTTTTTTTTTATTATTGATAGAACTATTTCGGGGGCCAAATTTTA 109 2444536 0.790149557 19 98 988 0.917721519 1.860338007 0.208860759 0.348623853 0.550632911 109 12 1 145 X:2444434-2444577 6 93 2829 FBgn0040388 902.53 28.22 43.69666667 0.103043666 3.295535082 2.128308795 3 3 3 0.25 dme-miR-1007-3p 6mer3-8 TGAGCT X 2444683 2444688 - X_2444683_2444688_- 0.942770031 0.934696725 0.938733378 0.005708685 boi FBtr0070457|FBtr0334883|FBtr0303887|FBtr0303886|FBtr0070458 2444165|2444165|2444165|2444165|2444165 2445050|2445050|2445050|2445050|2445050 X - 2444661 2444707 3'utr boi FlyBase G64424.1 TCAAGTTTTGTTTTCATTTTGAGCTCATTAAAATGTATTTCGAGCAG 99 2444689 0.790743353 6 99 1251 1 2.041392685 0.154545455 0.090909091 0.181818182 99 0 0 110 X:2444661-2444707 6 boi FBtr0303886|FBtr0070458|FBtr0334883|FBtr0303887|FBtr0070457 2444165|2444165|2444165|2444165|2444165 2445050|2445050|2445050|2445050|2445050 TGAGCT 6mer3-8 dme-miR-1007-3p X - 2444667 2444705 3'utr boi FlyBase G48555.1 AAGTTTTGTTTTCATTTTGAGCTCATTAAAATGTATTTC 49 2444689 0.792873835 4 47 599 0.966666667 1.763427994 0.25 0.183673469 0.333333333 49 2 0 58 X:2444667-2444705 6 74 2830 FBgn0040388 902.53 28.22 43.69666667 0.081991734 2.622253721 1.69349302 1 1 1 0.25 dme-miR-79-3p 8mer-A1 TAGCTTTA X 2444846 2444853 - X_2444846_2444853_- 0.546531367 0.520535334 0.53353335 0.018382019 boi FBtr0070457|FBtr0334883|FBtr0303887|FBtr0303886|FBtr0070458 2444165|2444165|2444165|2444165|2444165 2445050|2445050|2445050|2445050|2445050 X - 2444808 2444875 3'utr boi FlyBase G64425.2 GCAGCTCGAAACCCTCGAATATTAGCTTTAAGGCACCCGGTACTGTTTAGTTTTCCAAAAAACCAATT 132 2444854 0.699320215 12 123 872 0.952702703 2.149219113 0.114864865 0.098484848 0.195945946 132 7 0 141 X:2444808-2444875 8 boi FBtr0303886|FBtr0070458|FBtr0334883|FBtr0303887|FBtr0070457 2444165|2444165|2444165|2444165|2444165 2445050|2445050|2445050|2445050|2445050 TAGCTTTA 8mer-A1 dme-miR-79-3p X - 2444737 2445082 stop_codon boi FlyBase G48556.1 CGTCGGGCAGTCTGAACAGTATTGAGGTGTGATGGCTCGCAGAGGAGGCAACTAACTAGTGGACTAGTGGGCGGAGCAGCACAACGAGGAGAAATATACCTAAGCGGCAAGCGAAAGTGGTTCCCCAAAAACAGACAGTTTCAAGTAGACTTAAGGATCCGAAACTAGATGTGTATTATTGAGATAATCGTAGGACAGGTCGGCAGAGCAGCTCGAAACCCTCGAATATTAGCTTTAAGGCACCCGGTACTGTTTAGTTTTCCAAAAAACCAATTAATTTGGCCAATCATTAAGCTTAGAACTAGGGAATTTGCCATTAACAGAAGTTTCTGTCGTTTCAAATGCT 176 2444854 0.971450702 42 168 956 0.966292135 2.411619706 0.183520599 0.380681818 0.5917603 176 9 0 258 X:2444737-2445082 8 80.5 2831 FBgn0040388 902.53 28.22 43.69666667 0.089193711 2.852586818 1.842245785 1 1 1 0.25 dme-miR-34-5p 7mer-A1 ACTGCCA X 253453 253459 + X_253453_253459_+ 0.741182132 0.712008049 0.72659509 0.020629204 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 X + 253422 253480 3'utr G9a FlyBase G57695.1 TCGAAGCCCGGTCGGCTTTCTTTCTTTTTTGACTGCCAAATGTTTCGTGGTTAACCACT 25 253450 0.936675989 8 23 248 0.935483871 1.462397998 0.193548387 0.24 0.387096774 25 2 0 29 X:253422-253480 7 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 ACTGCCA 7mer-A1 dme-miR-34-5p X + 253425 253472 3'utr G9a FlyBase G43659.1 AAGCCCGGTCGGCTTTCTTTCTTTTTTGACTGCCAAATGTTTCGTGGT 14 253450 0.70470411 5 14 157 1 1.146128036 0.428571429 0 0 14 0 0 14 X:253425-253472 7 17.5 2832 FBgn0040372 792.6533333 13.78666667 21.11333333 0.022077747 1.26934236 0.82886012 3 3 3 0.25 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG X 253581 253587 + X_253581_253587_+ 0.658978785 0.630134513 0.644556649 0.020396 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 X + 253537 253598 3'utr G9a FlyBase G57696.1 TTGTATTAATGTTTTACGCCTTATTAATAATGTTTTTATTCTTAGTACCTGTAAAAACAAAT 9 253588 0.982593782 5 9 72 1 1 0 0.111111111 0.2 9 0 0 10 X:253537-253598 7 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" X + 253565 253609 3'utr G9a FlyBase G43660.1 AATGTTTTTATTCTTAGTACCTGTAAAAACAAATTAGTTTATACT 6 253587 0.985584871 4 5 49 0.714285714 0.698970004 0 0.166666667 0.285714286 6 2 0 5 X:253565-253609 7 6.5 2833 FBgn0040372 792.6533333 13.78666667 21.11333333 0.008200306 0.471470019 0.30786233 -7 -6 -6.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 253766 253773 + X_253766_253773_+ 0.591167438 0.625135094 0.608151266 0.024018791 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 X + 253730 253787 3'utr G9a FlyBase G57698.1 CAGGCATAAAATAGAATTGTAATGGAGGAAAGACCATCTAGTCATAAGAATGAAGGAG 50 253766 0.936809497 6 48 185 0.967741935 1.477121255 0.338709677 0.22 0.370967742 50 1 1 60 X:253730-253787 8 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X + 253742 253793 3'utr G9a FlyBase G43662.1 AGAATTGTAATGGAGGAAAGACCATCTAGTCATAAGAATGAAGGAGACAAAG 25 253766 0.913735943 5 25 98 1 1.62324929 0.428571429 0.52 0.714285714 25 0 0 42 X:253742-253793 8 37 2834 FBgn0040372 792.6533333 13.78666667 21.11333333 0.046678666 2.683752418 1.752447111 0 0 0 0.25 dme-miR-304-5p 8mer-A1 TGAGATTA X 2583759 2583766 - X_2583759_2583766_- 0.624274211 0.582932238 0.603603225 0.029233209 CG13760 FBtr0308567|FBtr0300707 2583743|2583743 2584291|2584291 X - 2583741 2583776 3'utr CG13760 FlyBase G64452.1 AGAAAATAAATGAGATTATTGTTCCAAATGTGAGCC 6 2583766 0.969312862 2 6 36 1 0.903089987 0.25 0.166666667 0.375 6 0 0 8 X:2583741-2583776 8 CG13760 FBtr0300707|FBtr0308567 2583743|2583743 2584291|2584291 TGAGATTA 8mer-A1 dme-miR-304-5p X - 2583751 2583786 3'utr CG13760 FlyBase G48573.1 ATGTATATGTAGAAAATAAATGAGATTATTGTTCCA 8 2583766 0.892965065 2 8 67 1 1.113943352 0.076923077 0.375 0.615384615 8 0 0 13 X:2583751-2583786 8 7 2835 FBgn0040375 102.9966667 8.843333333 13.49 0.067963365 0.791556728 0.518902891 0 0 0 0.25 dme-miR-283-5p 8mer-A1 TGATATTA X 2584160 2584167 - X_2584160_2584167_- 0.414909883 0.455005987 0.434957935 0.028352224 CG13760 FBtr0308567|FBtr0300707 2583743|2583743 2584291|2584291 X - 2584114 2584254 3'utr CG13760 FlyBase G64453.1 CAGATGAATTGATGAACAGATGAACAGAAGTACCTGCCGTCGCCAGGTTGCCAGGTGATGAGAACGGATGATTGGAATCTGCGCTTGTGATATTAGGACTTTAGGAGGAGACCTTGTAGGGGGGGACTTCGAGTGGGAGGT 257 2584171 0.986532939 24 233 1991 0.9 1.638489257 0.306896552 0.120622568 0.220689655 257 24 5 261 X:2584114-2584254 8 CG13760 FBtr0300707|FBtr0308567 2583743|2583743 2584291|2584291 TGATATTA 8mer-A1 dme-miR-283-5p X - 2584119 2584268 3'utr CG13760 FlyBase G48574.1 GATGAACAAATGAACAGATGAATTGATGAACAGATGAACAGAAGTACCTGCCGTCGCCAGGTTGCCAGGTGATGAGAACGGATGATTGGAATCTGCGCTTGTGATATTAGGACTTTAGGAGGAGACCTTGTAGGGGGGGACTTCGAGTGG 241 2584171 0.985010102 27 220 1786 0.924637681 1.901730692 0.31884058 0.315352697 0.52173913 241 23 3 319 X:2584119-2584268 8 171.5 2836 FBgn0040375 102.9966667 8.843333333 13.49 1.66510243 19.39313984 12.71312083 4 4 4 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA X 2617896 2617903 - X_2617896_2617903_- 0.621922752 0.620540429 0.62123159 0.000977504 Tsp3A FBtr0307159 2617756 2618435 X - 2617882 2617920 3'utr Tsp3A FlyBase G64495.1 TACTCGCTGAAATTCGATGCATTTATTTATATGTAATTC 20 2617904 0.788522122 6 17 203 0.869565217 1.301029996 0.47826087 0.15 0.260869565 20 3 0 20 X:2617882-2617920 8 Tsp3A FBtr0307159 2617756 2618435 TGCATTTA 8mer-A1 dme-miR-277-3p X - 2617822 2617920 3'utr Tsp3A FlyBase G48605.1 TACTCGCTGAAATTCGATGCATTTATTTATATGTAATTCCTTCGAAAAAAAAGCAACAAACAGTGCGCACAAATCTTGAATATCTATTCATCCAGAACC 30 2617904 0.978834267 11 24 220 0.80952381 0.929418926 0.285714286 0.333333333 0.523809524 30 5 3 34 X:2617822-2617920 8 17 2837 FBgn0040334 330.6633333 22.46333333 34.46666667 0.051411809 0.756788841 0.493230174 1 1 1 0.25 dme-miR-34-5p 6mer2-7 ACTGCC X 2618037 2618042 - X_2618037_2618042_- 0.999427671 0.989923494 0.994675583 0.006720484 Tsp3A FBtr0307159 2617756 2618435 X - 2618021 2618104 3'utr Tsp3A FlyBase G64497.1 TACTTGCATGTTTTGTGCGAGGTGTGTGTATTTTCAATTCCATATTACTTATGTTGTAATCGACTGCCTGGATAGCTGTATATA 26 2618036 0.817471291 10 25 216 0.96875 1.491361694 0.25 0.192307692 0.34375 26 1 0 31 X:2618021-2618104 6 Tsp3A FBtr0307159 2617756 2618435 ACTGCC 6mer2-7 dme-miR-34-5p X - 2618015 2618054 3'utr Tsp3A FlyBase G48607.1 ATGTTGTAATCGACTGCCTGGATAGCTGTATATACTCGTA 14 2618050 0.785712331 6 14 99 1 1.230448921 0.235294118 0.142857143 0.294117647 14 0 0 17 X:2618015-2618054 6 17 2838 FBgn0040334 330.6633333 22.46333333 34.46666667 0.051411809 0.756788841 0.493230174 -6 8 1 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 2621819 2621825 + X_2621819_2621825_+ 0.813019336 0.804176095 0.808597715 0.006253087 Seipin FBtr0070442 2621718 2622140 X + 2621754 2621887 3'utr Seipin FlyBase G58413.1 ATGGAACGAAAGAGGGACCACCATTAACCACCGAAGGCTAGACCAACGCCCGTGCGACGCTTGAGCCAAAGACTAAATAGATTTAGGACTAAGTTAGTGAACACAGCCAGCTGAAGTATTCCGGCGGATTAGCT 89 2621815 0.962228355 14 82 416 0.91 1.481920138 0.14 0.101123596 0.2 89 7 2 91 X:2621754-2621887 7 Seipin FBtr0070442 2621718 2622140 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X + 2621760 2621854 3'utr Seipin FlyBase G44177.1 CGAAAGAGGGACCACCATTAACCACCGAAGGCTAGACCAACGCCCGTGCGACGCTTGAGCCAAAGACTAAATAGATTTAGGACTAAGTTAGTGAA 61 2621815 0.958105488 10 56 267 0.928571429 1.658011397 0.102040816 0.426229508 0.642857143 61 6 1 91 X:2621760-2621854 7 61 2839 FBgn0040336 110.8766667 6.436666667 9.653333333 0.550160839 9.476954946 6.319060773 4 4 4 0.25 dme-miR-7-5p 6mer3-8 GTCTTC X 2695020 2695025 - X_2695020_2695025_- 0.934174718 0.999955676 0.967065197 0.046514191 CG2658 FBtr0070502|FBtr0345716 2694721|2694390 2695063|2695063 X - 2694950 2695039 3'utr CG2658 FlyBase G64508.1 AAGTCATAGCCATAGTCTTCGTACGCCACGTGCCCCTAGTCGCTCACCTTTTCGCCCGCCCCTGGCTCATGTGCGTTGAATGTAAATAAA 12 2695032 0.969947572 9 11 62 0.933333333 1.146128036 0.133333333 0.166666667 0.333333333 12 1 0 14 X:2694950-2695039 6 CG2658 FBtr0070502|FBtr0345716 2694721|2694390 2695063|2695063 GTCTTC 6mer3-8 dme-miR-7-5p X - 2694946 2695049 3'utr CG2658 FlyBase G48614.1 CTCAGATCGCAAGTCATAGCCATAGTCTTCGTACGCCACGTGCCCCTAGTCGCTCACCTTTTCGCCCGCCCCTGGCTCATGTGCGTTGAATGTAAATAAAGTTG 15 2695033 0.973421513 8 15 90 1 1.342422681 0.090909091 0.266666667 0.5 15 0 0 22 X:2694946-2695049 6 6 2840 FBgn0024992 506.2333333 20.17 30.76333333 0.011852242 0.297471492 0.195037382 7 8 7.5 0.25 dme-miR-308-3p 7mer-m1 TGTGATT X 269695 269701 - X_269695_269701_- 0.49741939 0.496239281 0.496829336 0.000834457 ewg FBtr0332978|FBtr0332976|FBtr0332977|FBtr0308209|FBtr0089441|FBtr0308208 269590|269590|269590|269609|269609|269609 273303|270568|270568|270568|270568|270568 X - 269658 269728 3'utr ewg FlyBase G63738.1 AAATTTTATTTAAAAAAAAGCGATTGTTGTGATTTTAATATAATTTTACCTTAAAATATTTGCTTGTACAT 89 269704 0.98749666 8 88 922 0.990291262 2.008600172 0.097087379 0.146067416 0.262135922 89 1 0 102 X:269658-269728 7 ewg FBtr0089441|FBtr0308208|FBtr0332977|FBtr0308209|FBtr0332976|FBtr0332978 269609|269609|269590|269609|269590|269590 270568|270568|270568|270568|270568|273303 TGTGATT 7mer-m1 dme-miR-308-3p X - 269676 269728 3'utr ewg FlyBase G48050.1 AAATTTTATTTAAAAAAAAGCGATTGTTGTGATTTTAATATAATTTTACCTTA 55 269704 0.81827912 7 53 576 0.973684211 1.86923172 0.065789474 0.254545455 0.460526316 55 2 0 74 X:269676-269728 7 71.5 2841 FBgn0005427 485.9333333 14.70333333 22.51 0.147139525 4.862842893 3.17636606 3 3 3 0.25 dme-miR-2535b-3p 8mer-m1 CCGTGAGT X 270080 270087 - X_270080_270087_- 0.382891599 0.455113036 0.419002317 0.051068242 ewg FBtr0332978|FBtr0332976|FBtr0332977|FBtr0308209|FBtr0089441|FBtr0308208 269590|269590|269590|269609|269609|269609 273303|270568|270568|270568|270568|270568 X - 270066 270121 3'utr ewg FlyBase G63739.1 ATCAGCCAGCCTACAGTTAGACGTACCTGTAACCCCGTGAGTTCTCGCTCCATACC 32 270092 0.784666311 7 31 159 0.976744186 1.62324929 0.093023256 0.3125 0.488372093 32 1 0 42 X:270066-270121 8 ewg FBtr0089441|FBtr0308208|FBtr0332977|FBtr0308209|FBtr0332976|FBtr0332978 269609|269609|269590|269609|269590|269590 270568|270568|270568|270568|270568|273303 CCGTGAGT 8mer-m1 dme-miR-2535b-3p X - 270067 270119 3'utr ewg FlyBase G48051.1 CAGCCAGCCTACAGTTAGACGTACCTGTAACCCCGTGAGTTCTCGCTCCATAC 24 270092 0.719497235 5 20 128 0.853658537 1.243038049 0.048780488 0.416666667 0.658536585 24 5 1 35 X:270067-270119 8 20.5 2842 FBgn0005427 485.9333333 14.70333333 22.51 0.042186857 1.394241669 0.910706353 5 5 5 0.25 dme-bantam-3p 8mer-A1 TGATCTCA X 270995 271002 - X_270995_271002_- 0.512763754 0.367147581 0.439955667 0.102966202 ewg FBtr0332978 269590 273303 X - 270977 271032 3'utr ewg FlyBase G63747.1 TGGGAAATGGCGGCGTTCAGTGCTATTCGCTGATCTCAGCGGGATCGTCAGTCCTA 57 271002 0.781620344 6 52 383 0.955223881 1.329058719 0.253731343 0.175438596 0.298507463 57 1 2 64 X:270977-271032 8 ewg FBtr0332978 269590 273303 TGATCTCA 8mer-A1 dme-bantam-3p X - 270969 271041 3'utr ewg FlyBase G48057.1 CATCCTCTTTGGGAAATGGCGGCGTTCAGTGCTATTCGCTGATCTCAGCGGGATCGTCAGTCCTAAGCCGGCG 35 271002 0.814625189 5 31 219 0.898305085 1.72427587 0.220338983 0.558823529 0.745762712 34 6 0 53 X:270969-271041 8 41.5 2843 FBgn0005427 485.9333333 14.70333333 22.51 0.085402662 2.822489231 1.843625056 0 0 0 0.25 dme-bantam-3p 8mer-A1 TGATCTCA X 271178 271185 - X_271178_271185_- 0.628172922 0.625859198 0.62701606 0.001636033 ewg FBtr0332978|FBtr0100578|FBtr0100582 269590|268507|268507 273303|271561|271561 X - 271121 271211 intron-5'utr ewg FlyBase G63748.1 AGGATATCCCGTTTCGGTGAGCAATGTGATCTCAGTTCCCGTCTCTATGTACCAGTCGGTAATGGCCAACGTGCAGCAGATCCAGACGAAC 63 271185 0.987010927 12 61 528 0.958333333 1.838849091 0.166666667 0.142857143 0.25 63 3 0 69 X:271121-271211 8 ewg FBtr0100582|FBtr0332978|FBtr0100578 268507|269590|268507 271561|273303|271561 TGATCTCA 8mer-A1 dme-bantam-3p X - 271136 271211 intron-5'utr ewg FlyBase G48058.1 AGGATATCCCGTTTCGGTGAGCAATGTGATCTCAGTTCCCGTCTCTATGTACCAGTCGGTAATGGCCAACGTGCAG 53 271186 0.983633203 9 50 422 0.942857143 1.342422681 0.228571429 0.264150943 0.442857143 53 2 2 66 X:271136-271211 8 55 2844 FBgn0005427 485.9333333 14.70333333 22.51 0.11318425 3.740648379 2.443358507 0 1 0.5 0.25 dme-miR-1008-3p 7mer-A1 GCTGTGA X 2717226 2717232 + X_2717226_2717232_+ 0.458583431 0.458586279 0.458584855 2.05E-06 CG2694 FBtr0070481|FBtr0070482|FBtr0310649 2717107|2717107|2717107 2717654|2717654|2717654 X + 2717194 2717288 3'utr CG2694 FlyBase G58487.1 AAAATGGAGCAGCCTCCAGTGAAAACGAACACGCTGTGACCTACTTTATATACCTACCTACATTTTATACAAACTTCTATAACCTGTACAATGGC 98 2717228 0.869808934 13 96 530 0.983870968 1.785329835 0 0.183673469 0.35483871 98 1 1 122 X:2717194-2717288 7 CG2694 FBtr0070482|FBtr0310649|FBtr0070481 2717107|2717107|2717107 2717654|2717654|2717654 GCTGTGA 7mer-A1 dme-miR-1008-3p X + 2717194 2717250 3'utr CG2694 FlyBase G44236.1 AAAATGGAGCAGCCTCCAGTGAAAACGAACACGCTGTGACCTACTTTATATACCTAC 65 2717228 0.878982731 8 61 325 0.965909091 1.62838893 0.022727273 0.261538462 0.454545455 65 2 1 85 X:2717194-2717250 7 76 2845 FBgn0024991 290.3333333 11.33666667 17.40333333 0.261768083 6.703910615 4.366979506 -2 -2 -2 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 2734792 2734797 - X_2734792_2734797_- 0.711145574 0.654343009 0.682744291 0.040165504 crm FBtr0070495|FBtr0070495|FBtr0070495|FBtr0070496|FBtr0070496|FBtr0070496 2734246|2734246|2734246|2734246|2734246|2734246 2735002|2735002|2735002|2735002|2735002|2735002 X - 2734715 2734817 3'utr crm FlyBase G64551.1 TATGTTTTTACGCGACTTTTTGTGATCTATACTCATTTTATGTATGCCAAGTATTAGCAAGCACTCACATTGTCTGAACATATATATTTATTTATACATTAAC 239 2734796 0.777182562 16 230 1811 0.967105263 1.62324929 0.381578947 0.217573222 0.384868421 239 4 6 294 X:2734715-2734817 6 crm FBtr0070495|FBtr0070495|FBtr0070495|FBtr0070496|FBtr0070496|FBtr0070496 2734246|2734246|2734246|2734246|2734246|2734246 2735002|2735002|2735002|2735002|2735002|2735002 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 2734779 2734816 3'utr crm FlyBase G48645.1 ATGTTTTTACGCGACTTTTTGTGATCTATACTCATTTT 108 2734796 0.648362768 10 108 942 1 2.176091259 0.806666667 0.314814815 0.506666667 108 0 0 150 X:2734779-2734816 6 115 2846 FBgn0000376 219.6566667 6.966666667 10.63 0.523544319 16.50717703 10.81843838 -1 -1 -1 0.25 dme-miR-283-5p 8mer-A1 TGATATTA X 2734865 2734872 - X_2734865_2734872_- 0.577657446 0.447662074 0.51265976 0.091920558 crm FBtr0070495|FBtr0070496 2734246|2734246 2735002|2735002 X - 2734840 2734898 3'utr crm FlyBase G64552.1 GTGTGCCTCCAAGCCTCATGTCCCACTGATATTACTCATTACTCACTCATCCCACCCAC 11 2734873 0.971848226 7 11 64 1 1.041392685 0.363636364 0 0 11 0 0 11 X:2734840-2734898 8 crm FBtr0070495|FBtr0070496 2734246|2734246 2735002|2735002 TGATATTA 8mer-A1 dme-miR-283-5p X - 2734838 2734873 3'utr crm FlyBase G48646.1 CTGATATTACTCATTACTCACTCATCCCACCCACCC 5 2734872 0.971902486 4 4 17 1 0.698970004 0.4 0 0 5 0 0 5 X:2734838-2734873 8 7 2847 FBgn0000376 219.6566667 6.966666667 10.63 0.031867915 1.004784689 0.658513641 1 0 0.5 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA X 2949079 2949086 + X_2949079_2949086_+ 0.542775766 0.575226596 0.559001181 0.022946181 CG3603 FBtr0332493 2948923 2949120 X + 2949060 2949098 3'utr CG3603 FlyBase G58505.1 AAGAGTAGGACCAGATTATTGCATTTACTTGTCAAGCCA 25 2949078 0.747567587 3 25 220 1 1.447158031 0.535714286 0.12 0.214285714 25 0 0 28 X:2949060-2949098 8 CG3603 FBtr0332493 2948923 2949120 TGCATTTA 8mer-A1 dme-miR-277-3p X + 2949060 2949092 3'utr CG3603 FlyBase G44249.1 AAGAGTAGGACCAGATTATTGCATTTACTTGTC 17 2949078 0.718231916 4 16 149 0.913043478 1.322219295 0.217391304 0.352941176 0.52173913 17 2 0 21 X:2949060-2949092 8 21 2848 FBgn0029648 25 3.55 5.413333333 0.84 5.915492958 3.879310345 1 1 1 0.25 dme-miR-308-3p 7mer-m1 TGTGATT X 3132826 3132832 + X_3132826_3132832_+ 0.521199401 0.52121849 0.521208945 1.35E-05 kirre FBtr0309501 3132424 3134532 X + 3132812 3132855 3'utr kirre FlyBase G58507.1 AACAAAAACCGTATTGTGATTTATAGCGTTAATTATTTTATGGC 25 3132825 0.743187544 4 23 264 0.928571429 1.414973348 0 0.12 0.214285714 25 2 0 26 X:3132812-3132855 7 kirre FBtr0309501 3132424 3134532 TGTGATT 7mer-m1 dme-miR-308-3p X + 3132815 3132847 3'utr kirre FlyBase G44251.1 AAAAACCGTATTGTGATTTATAGCGTTAATTAT 17 3132832 0.611854312 4 16 162 1 1.342422681 0.136363636 0.294117647 0.454545455 17 0 0 22 X:3132815-3132847 7 20.5 2849 FBgn0028369 20.34666667 0.466666667 0.723333333 1.007536042 43.92857143 28.34101382 1 -6 -2.5 0.25 dme-miR-988-3p 8mer-m1 ACAAGGGG X 3385571 3385578 + X_3385571_3385578_+ 0.610501099 0.626396837 0.618448968 0.011239957 dm FBtr0331605|FBtr0070525 3385311|3385311 3391697|3386011 X + 3385555 3385841 5'utr dm FlyBase G58551.1 TACCATACCATACCATACAAGGGGTTAGAGTTTACGAGTGATTTAACAAATTTGATTTCTTCAATGTGATATATATATGATTTTCTTTCCGCGCGATTTGATTTGGTAGGGAAAGGTTAACGAAAGCGGTTTTATGAAATCAATTTGAAGTGTTTTTTTTTCGCTGCATATATTACAATATACACGTATGGATTAGATTTAATTAACAATTAGCGGTCTGTATATAACATATGAAGTAGAATATCTTAATTATTTTTTTGAATTAGTTACTTAACCATGAAGTAAAC 664 3385570 0.977674322 62 611 4768 0.914540816 1.679427897 0.275510204 0.155120482 0.284438776 664 53 14 717 X:3385555-3385841 8 dm FBtr0331605|FBtr0070525 3385311|3385311 3391697|3386011 ACAAGGGG 8mer-m1 dme-miR-988-3p X + 3385555 3385714 5'utr dm FlyBase G44286.1 TACCATACCATACCATACAAGGGGTTAGAGTTTACGAGTGATTTAACAAATTTGATTTCTTCAATGTGATATATATATGATTTTCTTTCCGCGCGATTTGATTTGGTAGGGAAAGGTTAACGAAAGCGGTTTTATGAAATCAATTTGAAGTGTTTTTTTT 297 3385570 0.91509451 39 263 2207 0.891304348 1.567026366 0.20531401 0.32996633 0.519323671 297 36 9 369 X:3385555-3385714 8 282 2850 FBgn0262656 5210.653333 68.99333333 106.66 0.054119893 4.087351435 2.643915245 1 1 1 0.25 dme-miR-304-5p 6mer3-8 TGAGAT X 3386098 3386103 + X_3386098_3386103_+ 0.387883779 0.45073314 0.419308459 0.044441166 dm FBtr0331605 3385311 3391697 X + 3386051 3386137 3'utr dm FlyBase G58555.1 GAGCCACAAAGAGGAGATAGAGCACACAAAGTTGGGAGCGAGAACGATGAGATATATACTTATATAACATCTATATATCTATATATC 67 3386098 0.976643017 8 65 326 0.974683544 1.58546073 0.113924051 0.179104478 0.303797468 67 1 1 77 X:3386051-3386137 6 dm FBtr0331605 3385311 3391697 TGAGAT 6mer3-8 dme-miR-304-5p X + 3386042 3386119 3'utr dm FlyBase G44289.1 ACAACGAAGGAGCCACAAAGAGGAGATAGAGCACACAAAGTTGGGAGCGAGAACGATGAGATATATACTTATATAACA 53 3386098 0.959554018 9 50 226 0.96969697 1.806179974 0.090909091 0.20754717 0.363636364 53 2 0 64 X:3386042-3386119 6 50 2851 FBgn0262656 5210.653333 68.99333333 106.66 0.009595726 0.724707701 0.468779299 0 0 0 0.25 dme-miR-1008-3p 6mer3-8 AGCTGT X 3387014 3387019 + X_3387014_3387019_+ 0.446222508 0.449174784 0.447698646 0.002087591 dm FBtr0331605 3385311 3391697 X + 3386759 3387188 3'utr dm FlyBase G58557.2 ATATATTTTTTAACTGATAACTATGCATATGAAATGCGCAAAACTTAACGAAAACAAAACGGAATTAAGGAAACATTAAACTATATAATAGTGCTAAGCCGCGCCTAACCTCTCGAGATATATATAGTTAGGATGAGAGATAGGAAGAGTGTAGAAATTGGCTGCAAAGTTTGTGATTGGAGTTAAGAGAGGAGAGACCCAGAGAGAGATATATACACCCACGACCCAAGACCCAAGAAAACTCAAACTTTTGTGAGCTGTTTAACTGTCGATTTTTTGCTAATAAGTTATAGCCTTCCGGCGATATGTTATATATATATATATGTTATAACGATTCTACCAATTGTTTACACGCATCTAAGTATCAACTAAACTAAAAACTACTACTAAACTAATGGACATGAAGCATAAGGCAAATGCAAATGAAGTT 1579 3387033 0.918198984 82 1389 15981 0.884320175 1.67615545 0.270833333 0.132995567 0.249451754 1579 178 33 1613 X:3386759-3387188 6 dm FBtr0331605 3385311 3391697 AGCTGT 6mer3-8 dme-miR-1008-3p X + 3386817 3387087 3'utr dm FlyBase G44294.2 ACGGAATTAAGGAAACATTAAACTATATAATAGTGCTAAGCCGCGCCTAACCTCTCGAGATATATATAGTTAGGATGAGAGATAGGAAGAGTGTAGAAATTGGCTGCAAAGTTTGTGATTGGAGTTAAGAGAGGAGAGACCCAGAGAGAGATATATACACCCACGACCCAAGACCCAAGAAAACTCAAACTTTTGTGAGCTGTTTAACTGTCGATTTTTTGCTAATAAGTTATAGCCTTCCGGCGATATGTTATATATATATATATGTTAT 1147 3387033 0.992090859 53 1040 11654 0.912543153 1.768939419 0.284810127 0.380122058 0.590909091 1147 126 26 1586 X:3386817-3387087 6 822.5 2852 FBgn0262656 5210.653333 68.99333333 106.66 0.157849687 11.92144169 7.711419464 -19 -19 -19 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 3388918 3388923 + X_3388918_3388923_+ 0.729116877 0.560681531 0.644899204 0.119101814 dm FBtr0331605 3385311 3391697 X + 3388891 3388962 3'utr dm FlyBase G58571.1 AAGTAAACACAATAAATTACATTTTATGTACCTTCTACATATATAAACTAAATATATTACACAGAACACACA 135 3388917 0.979817993 9 127 1467 0.945205479 2.139879086 0 0.074074074 0.143835616 135 8 0 138 X:3388891-3388962 6 dm FBtr0331605 3385311 3391697 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X + 3388885 3388948 3'utr dm FlyBase G44308.1 TGAGAAAAGTAAACACAATAAATTACATTTTATGTACCTTCTACATATATAAACTAAATATATT 83 3388917 0.992824373 11 76 891 0.923664122 1.480725379 0.022900763 0.481927711 0.671755725 83 7 3 121 X:3388885-3388948 6 105.5 2853 FBgn0262656 5210.653333 68.99333333 106.66 0.020246981 1.52913325 0.98912432 1 1 1 0.25 dme-miR-1012-3p 8mer-A1 TTGACTAA X 3489219 3489226 + X_3489219_3489226_+ 0.550143162 0.55307203 0.551607596 0.002070974 CG10803 FBtr0331612|FBtr0332285 3488215|3488215 3490915|3490915 X + 3489201 3489240 3'utr CG10803 FlyBase G58590.1 CGAGCAAACGCTACCAATTTGACTAAAATTAGTTAAGTGA 15 3489219 0.814163105 2 13 103 0.866666667 1.113943352 0.266666667 0 0 15 2 0 13 X:3489201-3489240 8 CG10803 FBtr0332285|FBtr0331612 3488215|3488215 3490915|3490915 TTGACTAA 8mer-A1 dme-miR-1012-3p X + 3489206 3489253 3'utr CG10803 FlyBase G44325.1 AAACGCTACCAATTTGACTAAAATTAGTTAAGTGAAATTATACTCAAA 13 3489219 0.984350701 4 11 82 0.9 0.954242509 0.15 0.384615385 0.6 13 1 1 18 X:3489206-3489253 8 12.5 2854 FBgn0029666 905.38 23.07666667 35.43666667 0.013806358 0.541672685 0.352741981 0 0 0 0.25 dme-miR-307a-3p 7mer-A1 GTTGTGA X 3489473 3489479 + X_3489473_3489479_+ 0.639191931 0.634688301 0.636940116 0.003184526 CG10803 FBtr0331612|FBtr0332285 3488215|3488215 3490915|3490915 X + 3489435 3489486 3'utr CG10803 FlyBase G58591.1 CTAACCAAATGTTTCCACACGCGTCTGTGAAGTAAACCGTTGTGATCGCTTT 7 3489474 0.978849824 3 7 49 1 0.84509804 0 0 0 7 0 0 7 X:3489435-3489486 7 CG10803 FBtr0332285|FBtr0331612 3488215|3488215 3490915|3490915 GTTGTGA 7mer-A1 dme-miR-307a-3p X + 3489443 3489485 3'utr CG10803 FlyBase G44326.1 ATGTTTCCACACGCGTCTGTGAAGTAAACCGTTGTGATCGCTT 11 3489474 0.98357939 4 9 69 0.823529412 0.84509804 0.117647059 0.545454545 0.705882353 11 2 1 14 X:3489443-3489485 7 8 2855 FBgn0029666 905.38 23.07666667 35.43666667 0.008836069 0.346670519 0.225754868 -1 -1 -1 0.25 dme-bantam-3p 7mer-m8 TGATCTC X 3508783 3508789 - X_3508783_3508789_- 0.653203355 0.64702856 0.650115958 0.004366243 CG32791 FBtr0333795 3507243 3513002 X - 3508763 3508805 3'utr CG32791 FlyBase G64593.1 TTTTTAATTAATTCATTGATCTCTTCTCACAAGGTTGGTTCTC 34 3508789 0.679050608 5 33 321 0.976190476 1.612783857 0 0.205882353 0.357142857 34 1 0 41 X:3508763-3508805 7 CG32791 FBtr0333795 3507243 3513002 TGATCTC 7mer-m8 dme-bantam-3p X - 3508763 3508805 3'utr CG32791 FlyBase G48671.1 TTTTTAATTAATTCATTGATCTCTTCTCACAAGGTTGGTTCTC 15 3508789 0.645855555 5 15 142 1 1.397940009 0 0.466666667 0.68 15 0 0 25 X:3508763-3508805 7 24.5 2856 FBgn0052791 287.9933333 6.18 9.406666667 0.085071414 3.964401294 2.60453579 0 0 0 0.25 dme-bantam-3p 6mer3-8 TGATCT X 3706238 3706243 - X_3706238_3706243_- 0.965064486 0.999079745 0.982072115 0.024052379 Rala FBtr0070583|FBtr0070584 3704982|3704608 3707374|3707374 X - 3706216 3706253 intron-3'utr Rala FlyBase G64622.1 AGGTATTTTATGATCTAATCAGGGATATTTCATCGCGT 8 3706243 0.747518503 2 8 84 1 0.903089987 0.375 0 0 8 0 0 8 X:3706216-3706253 6 Rala FBtr0070583|FBtr0070584 3704982|3704608 3707374|3707374 TGATCT 6mer3-8 dme-bantam-3p X - 3706224 3706252 intron-3'utr Rala FlyBase G48692.1 GGTATTTTATGATCTAATCAGGGATATTT 5 3706244 0.963311441 3 5 40 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 X:3706224-3706252 6 6.5 2857 FBgn0015286 835.0366667 45.75666667 69.86666667 0.007784089 0.142055802 0.093034351 0 1 0.5 0.25 dme-miR-308-3p 7mer-m1 TGTGATT X 3787057 3787063 + X_3787057_3787063_+ 0.520154533 0.36665927 0.443406901 0.108537497 tlk FBtr0299581|FBtr0070596|FBtr0333753|FBtr0299582|FBtr0299580|FBtr0299579|FBtr0333751 3786403|3786403|3786403|3786403|3786403|3786403|3786403 3787977|3787977|3789770|3787977|3788818|3787977|3789770 X + 3787030 3787139 3'utr tlk FlyBase G58647.1 AACAAATTATTGCATTATCTGCTGGATTGTGATTGTGGTTCAAACATTAAAAATACACTTACTCATACACACAAGGTAGACACTGCAGACTAATTTTGCCTTAAAAGAAA 58 3787062 0.98275765 15 54 495 0.945945946 1.84509804 0.175675676 0.172413793 0.351351351 58 4 0 70 X:3787030-3787139 7 tlk FBtr0333751|FBtr0299582|FBtr0299580|FBtr0299579|FBtr0070596|FBtr0333753|FBtr0299581 3786403|3786403|3786403|3786403|3786403|3786403|3786403 3789770|3787977|3788818|3787977|3787977|3789770|3787977 TGTGATT 7mer-m1 dme-miR-308-3p X + 3787029 3787077 3'utr tlk FlyBase G44367.1 TAACAAATTATTGCATTATCTGCTGGATTGTGATTGTGGTTCAAACATT 38 3787063 0.80106654 9 35 391 0.915254237 1.431363764 0.203389831 0.421052632 0.627118644 38 4 1 54 X:3787029-3787077 7 37 2858 FBgn0086899 3401.553333 62.96 97.16333333 0.010877383 0.587674714 0.380802086 -5 -6 -5.5 0.25 dme-miR-14-3p 8mer-A1 AAGACTGA X 3791691 3791698 + X_3791691_3791698_+ 0.455415919 0.503082972 0.479249446 0.03370573 HIP-R FBtr0070597|FBtr0333764|FBtr0070598 3791667|3791667|3791667 3792477|3792477|3792477 X + 3791616 3791710 stop_codon HIP-R FlyBase G58657.1 AGCCTAAGCCTAAAAAGGACTCCGCCGACTTCGTCGATGACGGTTTGGACTAAGGTTTAGAAATGGGGCAGTAGTAAGACTGAAACATGCGTCGA 131 3791690 0.774859864 7 111 444 0.854304636 1.508529719 0.046357616 0.13740458 0.251655629 131 19 3 129 X:3791616-3791710 8 HIP-R FBtr0070598|FBtr0333764|FBtr0070597 3791667|3791667|3791667 3792477|3792477|3792477 AAGACTGA 8mer-A1 dme-miR-14-3p X + 3791656 3791725 stop_codon HIP-R FlyBase G44375.1 CGGTTTGGACTAAGGTTTAGAAATGGGGCAGTAGTAAGACTGAAACATGCGTCGATAAAAAGAAGTTAAC 91 3791690 0.929287388 6 81 304 0.905511811 1.759667845 0.023622047 0.274725275 0.480314961 91 11 1 115 X:3791656-3791725 8 104 2859 FBgn0029676 2406.406667 147.0733333 226.7733333 0.043217965 0.70713023 0.458607714 1 1 1 0.25 dme-miR-14-3p 8mer-A1 AAGACTGA X 3800774 3800781 + X_3800774_3800781_+ 0.457100851 0.4760482 0.466574525 0.013397764 HIP FBtr0070600 3800750 3801570 X + 3800738 3800796 stop_codon HIP FlyBase G58667.1 ACGGTTTGGACTAAGGTTTAGAAATGGGGCAGTAGTAAGACTGAAACATGCGTCGATAA 135 3800773 0.919593036 4 128 441 0.947976879 2.214843848 0 0.22962963 0.398843931 135 9 0 164 X:3800738-3800796 8 HIP FBtr0070600 3800750 3801570 AAGACTGA 8mer-A1 dme-miR-14-3p X + 3800739 3800793 stop_codon HIP FlyBase G44380.1 CGGTTTGGACTAAGGTTTAGAAATGGGGCAGTAGTAAGACTGAAACATGCGTCGA 83 3800773 0.912816725 5 77 256 0.959016393 1.767155866 0 0.34939759 0.557377049 83 4 1 117 X:3800739-3800793 8 107 2860 FBgn0260484 933.6966667 55.94 86.52333333 0.114598246 1.912763675 1.236660631 1 1 1 0.25 dme-miR-190-5p 6mer3-8 ACATAT X 3939838 3939843 + X_3939838_3939843_+ 0.634128444 0.509160035 0.57164424 0.088366003 CG2941 FBtr0070613|FBtr0345711 3939668|3939668 3940006|3940582 X + 3939807 3939860 3'utr CG2941 FlyBase G58719.1 TGTCCTTTAAAAGGATGACTGTATGCACATAACATATGTACTACTGCCTTGCAA 14 3939843 0.978329834 3 14 99 1 1.255272505 0.166666667 0.214285714 0.388888889 14 0 0 18 X:3939807-3939860 6 CG2941 FBtr0070613|FBtr0345711 3939668|3939668 3940006|3940582 ACATAT 6mer3-8 dme-miR-190-5p X + 3939817 3939860 3'utr CG2941 FlyBase G44420.1 AAGGATGACTGTATGCACATAACATATGTACTACTGCCTTGCAA 10 3939843 0.975294405 2 10 66 1 1.079181246 0.083333333 0.2 0.333333333 10 0 0 12 X:3939817-3939860 6 11 2861 FBgn0029686 285.74 9.48 14.62333333 0.038496535 1.160337553 0.752222475 -5 -5 -5 0.25 dme-miR-1012-3p 7mer-A1 TGACTAA X 3953149 3953155 + X_3953149_3953155_+ 0.820157733 0.7982515 0.809204617 0.015490023 Vap-33A FBtr0070618|FBtr0342739|FBtr0070617|FBtr0070616 3952921|3952921|3952921|3952921 3955442|3955442|3954086|3954086 X + 3953125 3953206 3'utr Vap-33A FlyBase G58731.1 AAACCACAGAGACGAATGTAAAGCTGACTAAACCGGGGACCGTATACATTTAAACGGTTGTATTGAAAATCAAAAATAATCA 19 3953149 0.930710976 6 18 69 0.95 0.977723605 0.1 0.052631579 0.1 19 0 1 19 X:3953125-3953206 7 Vap-33A FBtr0070616|FBtr0070617|FBtr0342739|FBtr0070618 3952921|3952921|3952921|3952921 3954086|3954086|3955442|3955442 TGACTAA 7mer-A1 dme-miR-1012-3p X + 3953131 3953176 3'utr Vap-33A FlyBase G44430.1 CAGAGACGAATGTAAAGCTGACTAAACCGGGGACCGTATACATTTA 9 3953149 0.941309821 4 6 24 0.8125 1.113943352 0.25 0.625 0.8125 8 3 0 13 X:3953131-3953176 7 12 2862 FBgn0029687 3606.676667 166.3933333 255.1133333 0.003327163 0.072118274 0.047037918 0 0 0 0.25 dme-miR-965-3p 6mer2-7 ACGCTT X 3953375 3953380 + X_3953375_3953380_+ 0.44362813 0.524223174 0.483925652 0.056989342 Vap-33A FBtr0070618|FBtr0342739|FBtr0070617|FBtr0070616 3952921|3952921|3952921|3952921 3955442|3955442|3954086|3954086 X + 3953362 3953393 3'utr Vap-33A FlyBase G58732.1 TTAAGCTGTATTGACGCTTCGTGTATTTCAAC 6 3953372 0.865413597 5 6 40 1 0.77815125 0.666666667 0 0 6 0 0 6 X:3953362-3953393 6 Vap-33A FBtr0070616|FBtr0070617|FBtr0342739|FBtr0070618 3952921|3952921|3952921|3952921 3954086|3954086|3955442|3955442 ACGCTT 6mer2-7 dme-miR-965-3p X + 3953361 3953394 3'utr Vap-33A FlyBase G44431.1 TTTAAGCTGTATTGACGCTTCGTGTATTTCAACC 7 3953372 0.730922732 3 7 53 1 1.079181246 0.5 0.428571429 0.666666667 7 0 0 12 X:3953361-3953394 6 6 2863 FBgn0029687 3606.676667 166.3933333 255.1133333 0.001663581 0.036059137 0.023518959 3 3 3 0.25 dme-miR-277-3p 7mer-m8 TGCATTT X 3953705 3953711 + X_3953705_3953711_+ 0.474461674 0.457513319 0.465987496 0.011984329 Vap-33A FBtr0070618|FBtr0342739|FBtr0070617|FBtr0070616 3952921|3952921|3952921|3952921 3955442|3955442|3954086|3954086 X + 3953689 3953727 3'utr Vap-33A FlyBase G58734.1 TGCTCAGATTTTCGATTGCATTTTTTCGCTATTATTAAT 11 3953704 0.812998988 2 11 138 1 1.113943352 0.153846154 0.181818182 0.307692308 11 0 0 13 X:3953689-3953727 7 Vap-33A FBtr0070616|FBtr0070617|FBtr0342739|FBtr0070618 3952921|3952921|3952921|3952921 3954086|3954086|3955442|3955442 TGCATTT 7mer-m8 dme-miR-277-3p X + 3953689 3953730 3'utr Vap-33A FlyBase G44433.1 TGCTCAGATTTTCGATTGCATTTTTTCGCTATTATTAATTTG 8 3953704 0.763923886 4 8 92 1 0.954242509 0.444444444 0.125 0.222222222 8 0 0 9 X:3953689-3953730 7 9 2864 FBgn0029687 3606.676667 166.3933333 255.1133333 0.002495372 0.054088705 0.035278438 1 1 1 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA X 3954292 3954299 + X_3954292_3954299_+ 0.618135422 0.614227369 0.616181395 0.002763373 Vap-33A FBtr0070618|FBtr0342739 3952921|3952921 3955442|3955442 X + 3954231 3954312 3'utr Vap-33A FlyBase G58735.1 CGCGGACGGCGGCTCTATATATACATATTTATATATAATCATTATTGTTTTGGTTGGCATTTGCATTTACTAAGTTTCGTTT 28 3954291 0.987945231 6 28 331 1 1.531478917 0.117647059 0.214285714 0.352941176 28 0 0 34 X:3954231-3954312 8 Vap-33A FBtr0342739|FBtr0070618 3952921|3952921 3955442|3955442 TGCATTTA 8mer-A1 dme-miR-277-3p X + 3954274 3954311 3'utr Vap-33A FlyBase G44434.1 ATTGTTTTGGTTGGCATTTGCATTTACTAAGTTTCGTT 10 3954291 0.7814271 3 10 113 1 1.113943352 0 0.3 0.461538462 10 0 0 13 X:3954274-3954311 8 17 2865 FBgn0029687 3606.676667 166.3933333 255.1133333 0.00471348 0.102167555 0.06663705 1 1 1 0.25 dme-miR-252-5p 6mer3-8 GTACTT X 3955039 3955044 + X_3955039_3955044_+ 0.83744424 0.999060746 0.918252493 0.114280123 Vap-33A FBtr0070618|FBtr0342739 3952921|3952921 3955442|3955442 X + 3955029 3955061 3'utr Vap-33A FlyBase G58738.1 TAAGCAAATTGTACTTGATGTCAGCTGTAGCAA 5 3955038 0.782655238 2 5 33 1 0.84509804 0 0.4 0.571428571 5 0 0 7 X:3955029-3955061 6 Vap-33A FBtr0342739|FBtr0070618 3952921|3952921 3955442|3955442 GTACTT 6mer3-8 dme-miR-252-5p X + 3955030 3955056 3'utr Vap-33A FlyBase G44435.1 AAGCAAATTGTACTTGATGTCAGCTGT 7 3955039 0.676958841 3 7 47 1 1.041392685 0.545454545 0.428571429 0.636363636 7 0 0 11 X:3955030-3955056 6 5.5 2866 FBgn0029687 3606.676667 166.3933333 255.1133333 0.00152495 0.033054209 0.021559046 1 0 0.5 0.25 dme-miR-1006-3p 6mer2-7 GAATTT X 4098114 4098119 - X_4098114_4098119_- 0.95789522 0.642509307 0.800202263 0.223011509 CG6379 FBtr0343297|FBtr0070671 4097590|4097916 4098173|4098173 X - 4098104 4098143 3'utr CG6379 FlyBase G64690.1 AACTATACATAAGGATACATATGTGAATTTCCTTTTTTTT 12 4098116 0.782979903 6 10 102 0.846153846 1.041392685 0 0.083333333 0.153846154 12 2 0 11 X:4098104-4098143 6 CG6379 FBtr0343297|FBtr0070671 4097590|4097916 4098173|4098173 GAATTT 6mer2-7 dme-miR-1006-3p X - 4098110 4098137 3'utr CG6379 FlyBase G48744.1 ACATAAGGATACATATGTGAATTTCCTT 6 4098115 0.783096857 3 6 43 1 1 0.3 0.333333333 0.6 6 0 0 10 X:4098110-4098137 6 9 2867 FBgn0029693 315.06 11.47 17.60333333 0.028565987 0.784655623 0.511266806 -3 -4 -3.5 0.25 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA X 4105606 4105613 + X_4105606_4105613_+ 0.521705415 0.52334812 0.522526767 0.001161564 brn FBtr0070638 4105462 4105791 X + 4105551 4105634 3'utr brn FlyBase G58739.1 ATTAGGAGCAGTGGATGATACCTCAACCGTTCAGTGAGACTTTAAACCAAGCAGCTGGTGCTAATAGTGCAAGATCGCAAGAGT 25 4105615 0.974113365 6 22 132 0.888888889 1.380211242 0.148148148 0.125 0.222222222 24 3 0 24 X:4105551-4105634 8 brn FBtr0070638 4105462 4105791 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" X + 4105554 4105627 3'utr brn FlyBase G44436.1 AGGAGCAGTGGATGATACCTCAACCGTTCAGTGAGACTTTAAACCAAGCAGCTGGTGCTAATAGTGCAAGATCG 16 4105592 0.968687245 6 14 77 0.904761905 0.977723605 0.142857143 0.25 0.428571429 16 1 1 19 X:4105554-4105627 8 11 2868 FBgn0000221 55.33333333 4.63 7.023333333 0.198795181 2.375809935 1.566207879 -9 14 2.5 0.25 dme-miR-317-3p 6mer3-8 TGTGTT X 4126872 4126877 + X_4126872_4126877_+ 0.602752764 0.702061449 0.652407106 0.070221784 tyf FBtr0301124|FBtr0345713|FBtr0305179|FBtr0305180|FBtr0305184|FBtr0305183 4125993|4125993|4125993|4125993|4125993|4125993 4128947|4130016|4128947|4128947|4128947|4128947 X + 4126771 4126883 3'utr tyf FlyBase G58762.1 TTTGGGCGCGTTGTTTGGAGGAAATCCTAATCCTAGATATTAAACCGAGTCAACGTCGCGTGTACATAGTGGACCAGAAGTCGTGTGGGCAGTTCGATCTCTGTGTTATGGAT 37 4126872 0.978892241 10 37 255 1 1.633468456 0.511627907 0.135135135 0.255813953 37 0 0 43 X:4126771-4126883 6 tyf FBtr0305183|FBtr0305184|FBtr0305179|FBtr0305180|FBtr0301124|FBtr0345713 4125993|4125993|4125993|4125993|4125993|4125993 4128947|4128947|4128947|4128947|4128947|4130016 TGTGTT 6mer3-8 dme-miR-317-3p X + 4126838 4126884 3'utr tyf FlyBase G44452.1 AGTGGACCAGAAGTCGTGTGGGCAGTTCGATCTCTGTGTTATGGATT 21 4126872 0.723513697 4 21 177 1 1.531478917 0.676470588 0.380952381 0.617647059 21 0 0 34 X:4126838-4126884 6 23.5 2869 FBgn0026083 3003.736667 42.11 64.35333333 0.007823589 0.558062218 0.365171449 0 0 0 0.25 dme-miR-305-3p 6mer2-7 TGTGCC X 4132786 4132791 + X_4132786_4132791_+ 0.950131771 0.988542231 0.969337001 0.027160254 GlcAT-I FBtr0070644 4132268 4132833 X + 4132747 4132800 3'utr GlcAT-I FlyBase G58774.1 TGGAGATTAGTTACATTAGATATACATAAGCTTCCCCTGTGTGCCTCCCAATTG 16 4132786 0.777590729 6 16 112 1 1.301029996 0.25 0.25 0.4 16 0 0 20 X:4132747-4132800 6 GlcAT-I FBtr0070644 4132268 4132833 TGTGCC 6mer2-7 dme-miR-305-3p X + 4132731 4132808 3'utr GlcAT-I FlyBase G44459.1 AGGTTTTGCAAATTGTTGGAGATTAGTTACATTAGATATACATAAGCTTCCCCTGTGTGCCTCCCAATTGACGCAAAT 16 4132787 0.693920892 8 15 132 0.96 1.380211242 0.12 0.375 0.6 16 1 0 24 X:4132731-4132808 6 11.5 2870 FBgn0066114 187.3333333 14.82333333 22.83333333 0.0613879 0.775803913 0.503649635 0 -1 -0.5 0.25 dme-miR-1012-3p 6mer3-8 TTGACT X 4371034 4371039 + X_4371034_4371039_+ 0.951098339 0.978436844 0.964767591 0.019331239 CG3626 FBtr0070652 4370341 4371136 X + 4371017 4371066 3'utr CG3626 FlyBase G58804.1 TTTACTAACCCAGACGATTGACTTTGTAATTTATGGTGTGCTACTGTGTG 23 4371034 0.897441426 4 23 166 1 1.447158031 0.142857143 0.173913043 0.321428571 23 0 0 28 X:4371017-4371066 6 CG3626 FBtr0070652 4370341 4371136 TTGACT 6mer3-8 dme-miR-1012-3p X + 4371017 4371050 3'utr CG3626 FlyBase G44477.1 TTTACTAACCCAGACGATTGACTTTGTAATTTAT 18 4371035 0.751307921 3 17 122 0.95 1.278753601 0.05 0.111111111 0.2 18 1 0 19 X:4371017-4371050 6 20 2871 FBgn0029706 385.3333333 12.31666667 18.87333333 0.051903114 1.623815968 1.05969622 0 -1 -0.5 0.25 dme-miR-999-3p 6mer3-8 AGTTAA X 4553219 4553224 - X_4553219_4553224_- 0.753895951 0.926596042 0.840245997 0.122117341 CG11444 FBtr0070698|FBtr0343567 4553115|4553115 4553334|4553334 X - 4553213 4553246 3'utr CG11444 FlyBase G64747.1 CCTTTTGATGAACAGTGCAATTAGTTAAGCATAA 8 4553225 0.719776927 3 8 52 1 0.954242509 0.333333333 0.125 0.222222222 8 0 0 9 X:4553213-4553246 6 CG11444 FBtr0343567|FBtr0070698 4553115|4553115 4553334|4553334 AGTTAA 6mer3-8 dme-miR-999-3p X - 4553213 4553244 3'utr CG11444 FlyBase G48780.1 TTTTGATGAACAGTGCAATTAGTTAAGCATAA 5 4553225 0.727206407 3 5 36 1 0.903089987 0.25 0.4 0.625 5 0 0 8 X:4553213-4553244 6 6.5 2872 FBgn0029715 690.7566667 79.31666667 121.3466667 0.009409971 0.081949989 0.053565542 1 1 1 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 4638847 4638853 + X_4638847_4638853_+ 0.819766892 0.44767714 0.633722016 0.263107221 pon FBtr0070681 4638658 4639112 X + 4638831 4638859 3'utr pon FlyBase G58824.1 AAGTTTTTAATTGCACCCAAAGATTGTCA 5 4638842 0.7899537 3 5 27 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 X:4638831-4638859 7 pon FBtr0070681 4638658 4639112 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X + 4638813 4638861 3'utr pon FlyBase G44489.1 ATTTTTCAGCACCTAGTTAAGTTTTTAATTGCACCCAAAGATTGTCACA 8 4638854 0.985595571 4 5 48 0.5 0.84509804 0.357142857 0.25 0.571428571 8 7 0 7 X:4638813-4638861 7 6 2873 FBgn0025739 591.8333333 27.75666667 42.74666667 0.010137989 0.216164285 0.140361822 5 -7 -1 0.25 dme-miR-2a-2-5p 6mer3-8 TGATGA X 4698733 4698738 + X_4698733_4698738_+ 0.915585998 0.996404993 0.955995495 0.057147663 ctp FBtr0070707|FBtr0070704|FBtr0070706|FBtr0307065 4698457|4698457|4698457|4698457 4702034|4699456|4699456|4702034 X + 4698695 4698742 3'utr ctp FlyBase G58846.1 ACTACAACCACCAGTAGAACATCTCAAGGATGCGGAAATGATGACCGA 6 4698733 0.914335817 3 6 20 1 0.77815125 0.333333333 0 0 6 0 0 6 X:4698695-4698742 6 ctp FBtr0070706|FBtr0307065|FBtr0070707|FBtr0070704 4698457|4698457|4698457|4698457 4699456|4702034|4702034|4699456 TGATGA 6mer3-8 dme-miR-2a-2-5p X + 4698691 4698742 3'utr ctp FlyBase G44504.1 AAACACTACAACCACCAGTAGAACATCTCAAGGATGCGGAAATGATGACCGA 10 4698725 0.929377927 6 8 31 0.909090909 1 0.272727273 0.1 0.181818182 10 1 0 10 X:4698691-4698742 6 4.5 2874 FBgn0011760 8034.93 648.8766667 999.3333333 0.000560055 0.006935062 0.004503002 0 8 4 0.25 dme-miR-190-5p 6mer3-8 ACATAT X 4699410 4699415 + X_4699410_4699415_+ 0.861220162 0.632719447 0.746969804 0.161574465 ctp FBtr0070707|FBtr0070704|FBtr0070706|FBtr0307065 4698457|4698457|4698457|4698457 4702034|4699456|4699456|4702034 X + 4699368 4699429 3'utr ctp FlyBase G58851.1 CAAATGTTTTATGTGCTGGAGCTTTGTTTGGACTTTTGATTTACATATGAAACCTGCGCAAT 20 4699404 0.659604972 8 18 219 0.965517241 1.447158031 0.344827586 0.25 0.482758621 20 1 0 28 X:4699368-4699429 6 ctp FBtr0070706|FBtr0307065|FBtr0070707|FBtr0070704 4698457|4698457|4698457|4698457 4699456|4702034|4702034|4699456 ACATAT 6mer3-8 dme-miR-190-5p X + 4699369 4699453 3'utr ctp FlyBase G44508.2 AAATGTTTTATGTGCTGGAGCTTTGTTTGGACTTTTGATTTACATATGAAACCTGCGCAATTAAACAATTGTTAACAAGAAAAGA 15 4699403 0.95902528 9 13 116 0.791666667 0.801632346 0 0.533333333 0.708333333 15 3 2 19 X:4699369-4699453 6 5 2875 FBgn0011760 8034.93 648.8766667 999.3333333 0.000622283 0.007705625 0.005003336 6 7 6.5 0.25 dme-miR-283-5p 7mer-A1 GATATTA X 4705047 4705053 + X_4705047_4705053_+ 0.527752477 0.76712229 0.647437383 0.169260009 l(1)G0334 FBtr0070709|FBtr0070711|FBtr0070708|FBtr0070710 4704769|4704769|4704769|4704769 4705123|4705265|4705123|4705123 X + 4705028 4705110 3'utr l(1)G0334 FlyBase G58859.1 ACTCTGGGGTACTGCATTGGATATTATATTGCGAACGTGTTCAATAAGGATAAAGCGAGGTGTAAATTGTTGAAAATATAAAA 14 4705072 0.981481815 8 10 105 0.75 0.77815125 0.1875 0.142857143 0.25 14 3 1 12 X:4705028-4705110 7 l(1)G0334 FBtr0070710|FBtr0070708|FBtr0070711|FBtr0070709 4704769|4704769|4704769|4704769 4705123|4705123|4705265|4705123 GATATTA 7mer-A1 dme-miR-283-5p X + 4705017 4705075 3'utr l(1)G0334 FlyBase G44516.1 CGCACCACATAACTCTGGGGTACTGCATTGGATATTATATTGCGAACGTGTTCAATAAG 9 4705044 0.978292364 4 8 56 0.9 0.954242509 0.1 0.111111111 0.2 9 1 0 9 X:4705017-4705075 7 6 2876 FBgn0028325 2302.306667 161.7833333 248.5566667 0.002606082 0.037086639 0.024139365 -25 3 -11 0.25 dme-bantam-3p 6mer3-8 TGATCT X 482668 482673 + X_482668_482673_+ 0.999973411 0.999000653 0.999487032 0.000687803 CG3176 FBtr0336920|FBtr0343501 482436|482580 482768|482768 X + 482623 482697 3'utr CG3176 FlyBase G57740.1 AAAGAATATAGAGCTATATAGTATTTAACATTAGGCAAAAATCTTTGATCTATTCTTCGTTAGCGCTGTGCGAGT 15 482667 0.985099664 9 15 127 1 1.301029996 0.1 0.333333333 0.5 15 0 0 20 X:482623-482697 6 CG3176 FBtr0336920|FBtr0343501 482436|482580 482768|482768 TGATCT 6mer3-8 dme-bantam-3p X + 482655 482706 3'utr CG3176 FlyBase G43687.1 AGGCAAAAATCTTTGATCTATTCTTCGTTAGCGCTGTGCGAGTACTGCCAGA 13 482674 0.804898776 7 11 87 0.909090909 1.301029996 0.318181818 0.538461538 0.727272727 13 2 0 20 X:482655-482706 6 9.5 2877 FBgn0029524 104.6533333 24.39 37.14333333 0.090775895 0.389503895 0.255765952 1 -6 -2.5 0.25 dme-miR-317-3p 8mer-A1 TGTGTTCA X 490671 490678 + X_490671_490678_+ 0.631125144 0.631136783 0.631130963 8.27E-06 CG3156 FBtr0070079 490570 490725 X + 490633 490684 3'utr CG3156 FlyBase G57746.1 TTGGTGGTGGACCAGCTAGTGCTATTGTTACCGGGATATGTGTTCATAAATC 11 490669 0.987272938 5 11 101 1 1.079181246 0.416666667 0.090909091 0.166666667 11 0 0 12 X:490633-490684 8 CG3156 FBtr0070079 490570 490725 TGTGTTCA 8mer-A1 dme-miR-317-3p X + 490618 490682 3'utr CG3156 FlyBase G43690.1 TGGCCCCACCGCTCCTTGGTGGTGGACCAGCTAGTGCTATTGTTACCGGGATATGTGTTCATAAA 14 490670 0.983922151 9 13 103 0.9 1.255272505 0.1 0.285714286 0.5 14 2 0 18 X:490618-490682 8 10.5 2878 FBgn0023536 204 10.62666667 16.39 0.051470588 0.988080301 0.640634533 2 1 1.5 0.25 dme-miR-79-3p 6mer3-8 TAGCTT X 4914175 4914180 + X_4914175_4914180_+ 0.716140284 0.882047313 0.799093799 0.117313965 CG32772 FBtr0342951|FBtr0343533|FBtr0300997|FBtr0342952 4914143|4914143|4914143|4914143 4914961|4915161|4914961|4915161 X + 4914138 4914256 stop_codon CG32772 FlyBase G58862.1 TAAGTAGGCTAGTTAAGAATGGAAAGAAGGTCTCTTTTAGCTTAAGCCCCGAACGATCAGCTGCTAAAGTCCCTGATTAGCATAGCCATAGCCAAAGTAGCATCACATTCAGCACATAC 64 4914173 0.977306137 8 63 413 0.971830986 1.838849091 0.154929577 0.109375 0.197183099 64 2 0 69 X:4914138-4914256 6 CG32772 FBtr0342952|FBtr0300997|FBtr0343533|FBtr0342951 4914143|4914143|4914143|4914143 4915161|4914961|4915161|4914961 TAGCTT 6mer3-8 dme-miR-79-3p X + 4914143 4914234 stop_codon CG32772 FlyBase G44518.1 AGGCTAGTTAAGAATGGAAAGAAGGTCTCTTTTAGCTTAAGCCCCGAACGATCAGCTGCTAAAGTCCCTGATTAGCATAGCCATAGCCAAAG 51 4914173 0.957867862 12 51 347 1 1.892094603 0.115384615 0.37254902 0.58974359 51 0 0 78 X:4914143-4914234 6 50.5 2879 FBgn0052772 546.74 21.57666667 33.00666667 0.092365658 2.340491271 1.529993941 2 2 2 0.25 dme-miR-14-3p 6mer3-8 AAGACT X 4921697 4921702 - X_4921697_4921702_- 0.888299069 0.979624447 0.933961758 0.064576739 CG44774 FBtr0343142 4921676 4927583 X - 4921685 4921777 3'utr CG44774 FlyBase G64792.1 AAACACAGAACCATACAAATTGTAGCCTTACAAACAGAAACAATTATTTATGTGTTAAGAGAACATGTTTTTGTAAAGACTAAATACAAATGA 29 4921705 0.956249217 11 28 189 0.96969697 1.505149978 0.03030303 0.137931034 0.242424242 29 1 0 32 X:4921685-4921777 6 CG44774 FBtr0343142 4921676 4927583 AAGACT 6mer3-8 dme-miR-14-3p X - 4921686 4921720 3'utr CG44774 FlyBase G48808.1 AGAGAACATGTTTTTGTAAAGACTAAATACAAATG 10 4921706 0.669483184 5 8 69 0.8125 0.812913357 0.375 0.5 0.6875 10 2 1 13 X:4921686-4921720 6 11 2880 FBgn0266000 3691.093333 67.20666667 103.37 0.002980147 0.163674239 0.106413853 3 4 3.5 0.25 dme-miR-8-3p 6mer3-8 CAGTAT X 4927350 4927355 - X_4927350_4927355_- 0.999630744 0.99952896 0.999579852 7.19E-05 CG44774 FBtr0343138|FBtr0343140|FBtr0343142|FBtr0343141|FBtr0343139|FBtr0343136|FBtr0345209|FBtr0343135|FBtr0343137 4926662|4926662|4921676|4926662|4926662|4926662|4926662|4926662|4926662 4927583|4927583|4927583|4927583|4927583|4927583|4927583|4927583|4927583 X - 4927331 4927423 3'utr CG44774 FlyBase G64808.1 AATATTTAACATTTCAAGGAACACCTTAGCCTAGACGTTACTTTAGCCTAGACTAGAGCACTGAACTACAGTATGGGCGAATGAGTCCACGCA 60 4927357 0.83351416 14 42 276 0.683544304 1.431363764 0.113924051 0.216666667 0.405063291 60 24 1 54 X:4927331-4927423 6 CG44774 FBtr0343139|FBtr0343141|FBtr0343142|FBtr0343138|FBtr0343140|FBtr0343137|FBtr0343135|FBtr0345209|FBtr0343136 4926662|4926662|4921676|4926662|4926662|4926662|4926662|4926662|4926662 4927583|4927583|4927583|4927583|4927583|4927583|4927583|4927583|4927583 CAGTAT 6mer3-8 dme-miR-8-3p X - 4927331 4927522 3'utr CG44774 FlyBase G48826.1 AGTAACCACCCTGTTACGTTTGTTATACACTAAGCTATTTAACGGCGACCGAAAGCCAAGCTCCCTTCCTTAGCCGCAGGTTCCATATCATTCAAGAGTAATATTTAACATTTCAAGGAACACCTTAGCCTAGACGTTACTTTAGCCTAGACTAGAGCACTGAACTACAGTATGGGCGAATGAGTCCACGCA 100 4927357 0.875410259 24 87 483 0.887323944 1.799340549 0.084507042 0.32 0.521126761 100 15 1 126 X:4927331-4927522 6 36.5 2881 FBgn0266000 3691.093333 67.20666667 103.37 0.009888669 0.543100883 0.353100513 2 2 2 0.25 dme-miR-11-3p 8mer-m1 CTGTGATG X 4955091 4955098 + X_4955091_4955098_+ 0.455213984 0.449863764 0.452538874 0.003783163 Ptp4E FBtr0301796|FBtr0343529|FBtr0070724|FBtr0301794|FBtr0343528|FBtr0301793 4954603|4954603|4954603|4954603|4955001|4954603 4955916|4955425|4955916|4955916|4955916|4955916 X + 4955068 4955111 3'utr Ptp4E FlyBase G58878.1 CATATACTATACGTAAAATCTGCCTGTGATGTGCTGGATGTGAT 54 4955088 0.758107803 8 45 393 0.887096774 1.439332694 0.35483871 0.111111111 0.225806452 54 6 1 55 X:4955068-4955111 8 Ptp4E FBtr0301793|FBtr0343528|FBtr0301794|FBtr0070724|FBtr0343529|FBtr0301796 4954603|4955001|4954603|4954603|4954603|4954603 4955916|4955916|4955916|4955916|4955425|4955916 CTGTGATG 8mer-m1 dme-miR-11-3p X + 4955069 4955144 3'utr Ptp4E FlyBase G44535.1 ATATACTATACGTAAAATCTGCCTGTGATGTGCTGGATGTGATTTGTCTACGAAGTGGCACTCGGAGTTGCTGTCA 49 4955087 0.982916455 9 45 374 0.915492958 1.511883361 0.436619718 0.346938776 0.549295775 49 5 1 65 X:4955069-4955144 8 49.5 2882 FBgn0004368 1052.996667 19.90333333 30.39 0.047008696 2.4870206 1.628825271 3 4 3.5 0.25 dme-miR-276a-3p 6mer2-7 GTTCCT X 503367 503372 + X_503367_503372_+ 0.911802027 0.984639921 0.948220974 0.051504173 svr FBtr0070086|FBtr0070085|FBtr0344737|FBtr0340146 502970|502970|502970|502970 504319|504319|504319|504319 X + 503331 503427 5'utr svr FlyBase G57756.1 TTTTTCGCATTTTCATACGCTTATATGCCAGCCTATGTTCCTTCCACGCCATTACTTCAGACGCGCACATATTTAGTGGATGCTTGATTTGTATATA 24 503368 0.963464403 7 21 187 0.888888889 1.380211242 0.148148148 0.125 0.222222222 24 3 0 24 X:503331-503427 6 svr FBtr0070085|FBtr0344737|FBtr0340146|FBtr0070086 502970|502970|502970|502970 504319|504319|504319|504319 GTTCCT 6mer2-7 dme-miR-276a-3p X + 503353 503391 5'utr svr FlyBase G43698.1 ATATGCCAGCCTATGTTCCTTCCACGCCATTACTTCAGA 12 503368 0.975682759 4 12 79 1 1.322219295 0.047619048 0.5 0.714285714 12 0 0 21 X:503353-503391 6 13 2883 FBgn0004648 2059.716667 56.39666667 86.34666667 0.006311548 0.230510077 0.150555899 -1 -1 -1 0.25 dme-miR-252-5p 8mer-m1 GTACTTAG X 503506 503513 + X_503506_503513_+ 0.618692077 0.619602228 0.619147152 0.000643538 svr FBtr0070086|FBtr0070085|FBtr0344737|FBtr0340146 502970|502970|502970|502970 504319|504319|504319|504319 X + 503489 503549 5'utr svr FlyBase G57757.1 AAGGAAATAAGCGAATTGTACTTAGGCAATATGCAGAAATTGGCCCACTTATGGTCATCGA 12 503505 0.983825368 3 11 59 0.916666667 1.041392685 0 0 0 12 1 0 11 X:503489-503549 8 svr FBtr0070085|FBtr0344737|FBtr0340146|FBtr0070086 502970|502970|502970|502970 504319|504319|504319|504319 GTACTTAG 8mer-m1 dme-miR-252-5p X + 503479 503539 5'utr svr FlyBase G43699.1 GAAATAAATTAAGGAAATAAGCGAATTGTACTTAGGCAATATGCAGAAATTGGCCCACTTA 7 503505 0.95680301 3 6 32 1 0.954242509 0.444444444 0.142857143 0.333333333 7 0 0 9 X:503479-503539 8 6.5 2884 FBgn0004648 2059.716667 56.39666667 86.34666667 0.003155774 0.115255039 0.075277949 1 1 1 0.25 dme-miR-304-5p 7mer-A1 GAGATTA X 5069248 5069254 + X_5069248_5069254_+ 0.823339508 0.823235171 0.82328734 7.38E-05 ovo FBtr0070738|FBtr0301914|FBtr0100408|FBtr0070739|FBtr0070740 5069079|5069079|5069079|5069079|5069079 5070772|5070929|5070772|5070929|5070929 X + 5069226 5069274 3'utr ovo FlyBase G58886.1 TGCGGAGGATACGGAATTATTGGAGATTATGCTTATTATGTATATTTTT 29 5069251 0.989747065 3 29 293 1 1.579783597 0.289473684 0.24137931 0.421052632 29 0 0 38 X:5069226-5069274 7 ovo FBtr0070740|FBtr0100408|FBtr0070739|FBtr0070738|FBtr0301914 5069079|5069079|5069079|5069079|5069079 5070929|5070772|5070929|5070772|5070929 GAGATTA 7mer-A1 dme-miR-304-5p X + 5069236 5069272 3'utr ovo FlyBase G44541.1 ACGGAATTATTGGAGATTATGCTTATTATGTATATTT 18 5069252 0.767705229 4 18 181 1 1.380211242 0 0.277777778 0.458333333 18 0 0 24 X:5069236-5069272 7 23.5 2885 FBgn0003028 7.666666667 0.146666667 0.23 3.065217391 160.2272727 102.173913 -3 -4 -3.5 0.25 dme-miR-1008-3p 6mer2-7 GCTGTG X 5069352 5069357 + X_5069352_5069357_+ 0.949474895 0.952203998 0.950839446 0.001929765 ovo FBtr0070738|FBtr0301914|FBtr0100408|FBtr0070739|FBtr0070740 5069079|5069079|5069079|5069079|5069079 5070772|5070929|5070772|5070929|5070929 X + 5069317 5069370 3'utr ovo FlyBase G58887.1 AGTACCCACTGTATCATGCTACCCCACTTCACTTTGCTGTGCAAATCTCTCTCA 19 5069350 0.985975946 5 19 160 1 1.342422681 0 0.157894737 0.272727273 19 0 0 22 X:5069317-5069370 6 ovo FBtr0070740|FBtr0100408|FBtr0070739|FBtr0070738|FBtr0301914 5069079|5069079|5069079|5069079|5069079 5070929|5070772|5070929|5070772|5070929 GCTGTG 6mer2-7 dme-miR-1008-3p X + 5069332 5069371 3'utr ovo FlyBase G44542.1 ATGCTACCCCACTTCACTTTGCTGTGCAAATCTCTCTCAC 6 5069350 0.982469194 2 5 57 0.888888889 0.903089987 0 0.333333333 0.555555556 6 1 0 8 X:5069332-5069371 6 11.5 2886 FBgn0003028 7.666666667 0.146666667 0.23 1.5 78.40909091 50 2 2 2 0.25 dme-bantam-3p 6mer3-8 TGATCT X 5069937 5069942 + X_5069937_5069942_+ 0.993394036 0.926506099 0.959950067 0.047296888 ovo FBtr0070738|FBtr0301914|FBtr0100408|FBtr0070739|FBtr0070740 5069079|5069079|5069079|5069079|5069079 5070772|5070929|5070772|5070929|5070929 X + 5069919 5069958 3'utr ovo FlyBase G58888.1 AATCGAATCGCGAGAATATGATCTACTGAATATATAGTTT 15 5069937 0.705586519 2 14 94 1 1.278753601 0.105263158 0.266666667 0.421052632 15 0 0 19 X:5069919-5069958 6 ovo FBtr0070740|FBtr0100408|FBtr0070739|FBtr0070738|FBtr0301914 5069079|5069079|5069079|5069079|5069079 5070929|5070772|5070929|5070772|5070929 TGATCT 6mer3-8 dme-bantam-3p X + 5069914 5069953 3'utr ovo FlyBase G44543.1 TGGAAAATCGAATCGCGAGAATATGATCTACTGAATATAT 11 5069937 0.958003785 4 11 62 1 1.230448921 0.176470588 0.363636364 0.588235294 11 0 0 17 X:5069914-5069953 6 12.5 2887 FBgn0003028 7.666666667 0.146666667 0.23 1.630434783 85.22727273 54.34782609 0 0 0 0.25 dme-bantam-3p 6mer3-8 TGATCT X 5069998 5070003 + X_5069998_5070003_+ 0.951159638 0.999981446 0.975570542 0.034522226 ovo FBtr0070738|FBtr0301914|FBtr0100408|FBtr0070739|FBtr0070740 5069079|5069079|5069079|5069079|5069079 5070772|5070929|5070772|5070929|5070929 X + 5069978 5070016 3'utr ovo FlyBase G58889.1 GGCAATACCACCAATTGTACTGATCTTTAATGAACAAAC 7 5070005 0.764810314 5 7 55 1 0.903089987 0 0.142857143 0.25 7 0 0 8 X:5069978-5070016 6 ovo FBtr0070740|FBtr0100408|FBtr0070739|FBtr0070738|FBtr0301914 5069079|5069079|5069079|5069079|5069079 5070929|5070772|5070929|5070772|5070929 TGATCT 6mer3-8 dme-bantam-3p X + 5069977 5070010 3'utr ovo FlyBase G44544.1 AGGCAATACCACCAATTGTACTGATCTTTAATGA 5 5069995 0.980426113 4 5 37 1 0.903089987 0.25 0.4 0.625 5 0 0 8 X:5069977-5070010 6 6 2888 FBgn0003028 7.666666667 0.146666667 0.23 0.782608696 40.90909091 26.08695652 -7 3 -2 0.25 dme-miR-8-3p 8mer-A1 CAGTATTA X 5072734 5072741 - X_5072734_5072741_- 0.624121218 0.613048105 0.618584661 0.007829864 CG32767 FBtr0331758 5071025 5077136 X - 5072729 5072776 3'utr CG32767 FlyBase G64823.1 CGTATTTATACACTATGAATGTCTAGTCGTATTTTCAGTATTATGTAA 21 5072744 0.655660895 8 20 228 0.961538462 1.397940009 0.076923077 0.142857143 0.307692308 21 1 0 25 X:5072729-5072776 8 CG32767 FBtr0331758 5071025 5077136 CAGTATTA 8mer-A1 dme-miR-8-3p X - 5072730 5072771 3'utr CG32767 FlyBase G48842.1 TTATACACTATGAATGTCTAGTCGTATTTTCAGTATTATGTA 12 5072757 0.842752395 4 9 113 0.785714286 0.740362689 0 0.166666667 0.285714286 12 2 1 11 X:5072730-5072771 8 1 2889 FBgn0052767 1383.503333 20.81666667 32.11666667 0.000722803 0.048038431 0.031136482 3 16 9.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 5072749 5072755 - X_5072749_5072755_- 0.350791828 0.617410216 0.484101022 0.188527679 CG32767 FBtr0331758 5071025 5077136 X - 5072729 5072776 3'utr CG32767 FlyBase G64823.1 CGTATTTATACACTATGAATGTCTAGTCGTATTTTCAGTATTATGTAA 21 5072744 0.655660895 8 20 228 0.961538462 1.397940009 0.076923077 0.142857143 0.307692308 21 1 0 25 X:5072729-5072776 7 CG32767 FBtr0331758 5071025 5077136 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X - 5072730 5072771 3'utr CG32767 FlyBase G48842.1 TTATACACTATGAATGTCTAGTCGTATTTTCAGTATTATGTA 12 5072757 0.842752395 4 9 113 0.785714286 0.740362689 0 0.166666667 0.285714286 12 2 1 11 X:5072730-5072771 7 6.5 2890 FBgn0052767 1383.503333 20.81666667 32.11666667 0.004698218 0.3122498 0.20238713 -11 2 -4.5 0.25 dme-miR-13b-2-5p 6mer3-8 TTTGAC X 5075251 5075256 - X_5075251_5075256_- 0.586561676 0.959862757 0.773212216 0.263963739 CG32767 FBtr0331757|FBtr0302118|FBtr0302119|FBtr0300995|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 X - 5075183 5075293 3'utr CG32767 FlyBase G64827.1 TCTTATGTGCAATCTCCCCCCATCACTGAAACTGAACTTTGACCTCTTTCTCACCTTCGCTCGAACACCTTGTGGTTTCCTTAATTAGTTGCTAAGTATCCACGATAAACA 43 5075255 0.950771816 12 40 338 0.943396226 1.698970004 0.264150943 0.23255814 0.377358491 43 3 0 50 X:5075183-5075293 6 CG32767 FBtr0300995|FBtr0302119|FBtr0302118|FBtr0331757|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 TTTGAC 6mer3-8 dme-miR-13b-2-5p X - 5075202 5075304 3'utr CG32767 FlyBase G48846.1 TTTTTAAAAGTTCTTATGTGCAATCTCCCCCCATCACTGAAACTGAACTTTGACCTCTTTCTCACCTTCGCTCGAACACCTTGTGGTTTCCTTAATTAGTTGC 34 5075255 0.90333967 14 30 282 0.849056604 1.653212514 0.264150943 0.441176471 0.641509434 34 8 0 45 X:5075202-5075304 6 19 2891 FBgn0052767 1383.503333 20.81666667 32.11666667 0.013733252 0.912730184 0.59159315 -1 -1 -1 0.25 dme-bantam-3p 7mer-m8 TGATCTC X 5075689 5075695 - X_5075689_5075695_- 0.60500703 0.592896021 0.598951526 0.00856377 CG32767 FBtr0331757|FBtr0302118|FBtr0302119|FBtr0300995|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 X - 5075544 5075720 3'utr CG32767 FlyBase G64829.1 AATTTTAGTTGTATAGTTTTGCATTTGATCTCTCGGCTTTAGTTTTTGCATTCAAAGCGAAAGAAAATTCAGTTCCTGTGTAATTGCAAAGATAACTTGAGAAATTGTATTATAATTTAATGGACTAGGCAATCAATGTGCTGCTTTCATGCGGAAAGATATGCATATATGTATGAA 302 5075696 0.987367697 35 289 3392 0.959128065 1.944482672 0.108991826 0.185430464 0.329700272 302 12 3 352 X:5075544-5075720 7 CG32767 FBtr0300995|FBtr0302119|FBtr0302118|FBtr0331757|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 TGATCTC 7mer-m8 dme-bantam-3p X - 5075671 5075720 3'utr CG32767 FlyBase G48849.1 AATTTTAGTTGTATAGTTTTGCATTTGATCTCTCGGCTTTAGTTTTTGCA 181 5075696 0.708418765 13 173 2079 0.96 2.421603927 0.101818182 0.397790055 0.603636364 181 11 0 264 X:5075671-5075720 7 219.5 2892 FBgn0052767 1383.503333 20.81666667 32.11666667 0.158655201 10.54443555 6.834457706 1 1 1 0.25 dme-miR-1003-3p 6mer3-8 ATGTGA X 5075844 5075849 - X_5075844_5075849_- 0.999975316 0.999800932 0.999888124 0.000123319 CG32767 FBtr0331757|FBtr0302118|FBtr0302119|FBtr0300995|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 X - 5075834 5075897 3'utr CG32767 FlyBase G64831.1 TAGTGTAAAAAAAAAAATGAAGAAAATCTCAAATGAACTTGTAACTTGATGTGAAACACGAATT 15 5075851 0.970654228 6 14 82 1 1.255272505 0.166666667 0.2 0.333333333 15 0 0 18 X:5075834-5075897 6 CG32767 FBtr0300995|FBtr0302119|FBtr0302118|FBtr0331757|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 ATGTGA 6mer3-8 dme-miR-1003-3p X - 5075830 5075865 3'utr CG32767 FlyBase G48851.1 ATGAACTTGTAACTTGATGTGAAACACGAATTGTTT 9 5075849 0.991305702 5 6 57 0.727272727 0.602059991 0.090909091 0.222222222 0.363636364 9 2 1 8 X:5075830-5075865 6 8 2893 FBgn0052767 1383.503333 20.81666667 32.11666667 0.005782422 0.384307446 0.249091853 2 0 1 0.25 dme-bantam-3p 6mer3-8 TGATCT X 5075934 5075939 - X_5075934_5075939_- 0.997647746 0.998357623 0.998002684 0.000501975 CG32767 FBtr0331757|FBtr0302118|FBtr0302119|FBtr0300995|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 X - 5075922 5075978 3'utr CG32767 FlyBase G64832.1 TGCTCTCGTGCCCTCTCTGTCACTGTCCCCATCTCACTCTGATCTGTTTATAAGAAG 42 5075940 0.789367719 10 39 418 0.931818182 1.311753861 0.181818182 0.047619048 0.090909091 42 2 1 41 X:5075922-5075978 6 CG32767 FBtr0300995|FBtr0302119|FBtr0302118|FBtr0331757|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 TGATCT 6mer3-8 dme-bantam-3p X - 5075925 5075956 3'utr CG32767 FlyBase G48852.1 CTGTCCCCATCTCACTCTGATCTGTTTATAAG 12 5075939 0.763357932 4 12 116 1 1.204119983 0 0.25 0.4375 12 0 0 16 X:5075925-5075956 6 24 2894 FBgn0052767 1383.503333 20.81666667 32.11666667 0.017347266 1.152922338 0.747275558 1 0 0.5 0.25 dme-bantam-3p 8mer-A1 TGATCTCA X 513791 513798 - X_513791_513798_- 0.479030772 0.537623327 0.508327049 0.041431154 elav FBtr0307173 509233 517791 X - 513711 513820 3'utr elav FlyBase G63820.1 AAGAGGTGCCATCGGAATCCGTTGATCTCAGCTAAAAAGACATCCCCAGACATTCCCAGTCGTGTTTGGTTTAGTCCTCGTAACTCCACGATTTAAGGGGGTATCCCCCG 76 513799 0.967675496 10 76 417 1 1.995635195 0.191919192 0.263157895 0.434343434 76 0 0 99 X:513711-513820 8 elav FBtr0307173 509233 517791 TGATCTCA 8mer-A1 dme-bantam-3p X - 513761 513820 3'utr elav FlyBase G48109.1 AAGAGGTGCCATCGGAATCCGTTGATCTCAGCTAAAAAGACATCCCCAGACATTCCCAGT 47 513799 0.970093052 7 45 255 0.966666667 1.763427994 0.266666667 0.234042553 0.4 47 2 0 58 X:513761-513820 8 59 2895 FBgn0260400 1799.413333 52.41 80.75 0.032788464 1.125739363 0.730650155 1 1 1 0.25 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 513834 513841 - X_513834_513841_- 0.575231264 0.544605161 0.559918213 0.021655923 elav FBtr0307173 509233 517791 X - 513821 513878 3'utr elav FlyBase G63821.1 TCCTCTGACAGTCACATGAAGAAGATGAAGGAATCGATCTAGTCAAGGCCCATCTAAC 44 513841 0.702031632 6 36 174 0.823529412 0.924279286 0.352941176 0.159090909 0.274509804 44 5 4 42 X:513821-513878 8 elav FBtr0307173 509233 517791 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X - 513821 513859 3'utr elav FlyBase G48110.1 AGAAGATGAAGGAATCGATCTAGTCAAGGCCCATCTAAC 24 513841 0.662849714 4 22 89 0.918918919 1.054357662 0.27027027 0.375 0.594594595 24 1 2 34 X:513821-513859 8 31.5 2896 FBgn0260400 1799.413333 52.41 80.75 0.017505706 0.601030338 0.390092879 0 0 0 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 514231 514236 - X_514231_514236_- 0.999609117 0.999999931 0.999804524 0.000276337 elav FBtr0307173|FBtr0307173|FBtr0307173 509233|509233|509233 517791|517791|517791 X - 514210 514247 3'utr elav FlyBase G63822.1 ACTGCAAACTCCTGTGAATTCTATCGAATGAATATTTA 17 514229 0.629703102 5 16 112 0.958333333 1.361727836 0.041666667 0.294117647 0.5 17 1 0 23 X:514210-514247 6 elav FBtr0307173|FBtr0307173|FBtr0307173 509233|509233|509233 517791|517791|517791 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X - 514211 514288 3'utr elav FlyBase G48111.1 TTTAGTTGATATTCTAGCTATATACGATCTGTGCGTATGTTACTGCAAACTCCTGTGAATTCTATCGAATGAATATTT 13 514238 0.982575278 6 12 97 0.894736842 0.753327667 0.263157895 0.384615385 0.578947368 13 0 2 17 X:514211-514288 6 13.5 2897 FBgn0260400 1799.413333 52.41 80.75 0.007502445 0.25758443 0.167182663 -7 2 -2.5 0.25 dme-miR-33-5p 7mer-A1 AATGCAA X 515058 515064 - X_515058_515064_- 0.495756983 0.510691068 0.503224025 0.010560003 elav FBtr0307173 509233 517791 X - 514932 515082 3'utr elav FlyBase G63825.1 ATTGTGCAATAGTTTTAAAATGCAACTGAAGGCAAAACACAACAACAAATTTTCAAGTATCTCAAATTATAATTTCATTAGGCGAGGAAAACGAGAAATGAAATATTTGATCTTATGAAACATAATTGTATGATTACTCTATACACACCGC 48 515057 0.929408603 18 43 357 0.909090909 1.22184875 0.2 0.145833333 0.254545455 48 3 2 50 X:514932-515082 7 elav FBtr0307173 509233 517791 AATGCAA 7mer-A1 dme-miR-33-5p X - 514991 515121 3'utr elav FlyBase G48114.1 TTGTCACCGATGATCAAATTAATTGTATTAATTATAATTATTGTGCAATAGTTTTAAAATGCAACTGAAGGCAAAACACAACAACAAATTTTCAAGTATCTCAAATTATAATTTCATTAGGCGAGGAAAAC 19 515056 0.999365495 12 19 123 1 1.491361694 0.032258065 0.368421053 0.612903226 19 0 0 31 X:514991-515121 7 8 2898 FBgn0260400 1799.413333 52.41 80.75 0.004445893 0.152642625 0.099071207 -7 -8 -7.5 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 515404 515410 - X_515404_515410_- 0.81840531 0.816079182 0.817242246 0.001644801 elav FBtr0307173 509233 517791 X - 515397 515433 3'utr elav FlyBase G63829.1 AGAAGCCGCCTGCTCTTCCCTTTCCAAAGATTTACCC 23 515412 0.78318523 3 23 194 1 1.397940009 0.12 0.086956522 0.16 23 0 0 25 X:515397-515433 7 elav FBtr0307173 509233 517791 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X - 515397 515489 3'utr elav FlyBase G48116.1 TCAAAACCAAAAGAACTATGGCAATTTCTAGCTAATAAAATGATTGAATGATTGATAGAAGCCGCCTGCTCTTCCCTTTCCAAAGATTTACCC 20 515412 0.980244575 7 20 145 1 1.491361694 0.064516129 0.4 0.612903226 20 0 0 31 X:515397-515489 7 17 2899 FBgn0260400 1799.413333 52.41 80.75 0.009447524 0.324365579 0.210526316 2 2 2 0.25 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 515551 515558 - X_515551_515558_- 0.472080515 0.449986428 0.461033472 0.015622888 elav FBtr0307173 509233 517791 X - 515489 515576 3'utr elav FlyBase G63830.1 AAAATTCGCAACAAGAACTCTAGTCAGAAGATGGAAAACAAGAATATTATTATGATGAGGCAGCCGCATATAAGGAGGAATAGTAGAT 76 515558 0.903199156 10 70 284 0.947916667 1.481920138 0.09375 0.223684211 0.385416667 76 3 2 91 X:515489-515576 8 elav FBtr0307173 509233 517791 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X - 515540 515580 3'utr elav FlyBase G48117.2 GAACAAAATTCGCAACAAGAACTCTAGTCAGAAGATGGAAA 43 515558 0.84046978 4 33 131 0.845070423 1.176091259 0.169014085 0.348837209 0.605633803 43 8 3 60 X:515540-515580 8 48 2900 FBgn0260400 1799.413333 52.41 80.75 0.026675361 0.915855753 0.594427245 0 0 0 0.25 dme-miR-308-3p 7mer-m1 TGTGATT X 5327209 5327215 - X_5327209_5327215_- 0.415755729 0.463553685 0.439654707 0.03379829 CG3309 FBtr0344827|FBtr0070798 5326673|5326673 5327305|5327305 X - 5327190 5327239 3'utr CG3309 FlyBase G64868.1 CTGTCTGCTAGTATCCTGTGATTGTGTGATTGTGCCTGGCGGTGCTCTTT 51 5327209 0.639092411 13 51 475 1 1.785329835 0.229508197 0.196078431 0.327868852 51 0 0 61 X:5327190-5327239 7 CG3309 FBtr0344827|FBtr0070798 5326673|5326673 5327305|5327305 TGTGATT 7mer-m1 dme-miR-308-3p X - 5327160 5327239 3'utr CG3309 FlyBase G48878.1 CTGTCTGCTAGTATCCTGTGATTGTGTGATTGTGCCTGGCGGTGCTCTTTATCAGTGTAAATAGATTTTAATCGGCGATT 47 5327209 0.990501456 13 43 443 0.914285714 1.10720997 0.285714286 0.382978723 0.585714286 47 2 4 64 X:5327160-5327239 7 47 2901 FBgn0029756 52.66666667 2.41 3.66 0.892405063 19.50207469 12.84153005 -6 -6 -6 0.25 dme-miR-184-5p 6mer3-8 TGATAA X 5412697 5412702 - X_5412697_5412702_- 0.697256954 0.568804714 0.633030834 0.090829492 spoon FBtr0070795 5412384 5414972 X - 5412528 5412738 3'utr spoon FlyBase G64872.1 TCGAATTCATTGTAGATTTGTCACTTGTACAATTGTTGATAAACTGATTAACTGATAACTGATTAACTGACATAGAGATAATGCAAACACGACAGACATGATGTAGAGCACATATTGAAACTAATCTTAGTCGATAGCGAGAAGAGAAGAAGAGACGTGAAGTGAAGAGTCCTCCCTCAAAGATCATCGTAAGTGTGTGGTACTTCTATTT 70 5412705 0.942223787 24 62 473 0.894117647 1.579783597 0.2 0.171428571 0.317647059 70 8 1 76 X:5412528-5412738 6 spoon FBtr0070795 5412384 5414972 TGATAA 6mer3-8 dme-miR-184-5p X - 5412605 5412730 3'utr spoon FlyBase G48882.1 ATTGTAGATTTGTCACTTGTACAATTGTTGATAAACTGATTAACTGATAACTGATTAACTGACATAGAGATAATGCAAACACGACAGACATGATGTAGAGCACATATTGAAACTAATCTTAGTCGA 36 5412705 0.984619078 20 35 280 0.927272727 1.707570176 0.181818182 0.388888889 0.6 36 4 0 51 X:5412605-5412730 6 19.5 2902 FBgn0263987 8368.983333 240.6166667 372.13 0.002330032 0.081041768 0.052401043 3 3 3 0.25 dme-miR-92b-3p 6mer3-8 GTGCAA X 5412925 5412930 - X_5412925_5412930_- 0.870473535 0.807501718 0.838987627 0.044527787 spoon FBtr0070795 5412384 5414972 X - 5412823 5412979 3'utr spoon FlyBase G64873.1 TATCCTAAACTAAAACAACTTTTGGAGGGGCTGCCCTCCACACACTGTAGTGCAAATTCGTTTAATGGTTCCTCGTTTTAATAATGTCGTTTAATGCCTTTGGAAATTCGAACTACATTTTAGTCTATGGAACACTAAATACATATTATTGGTTACT 60 5412932 0.983998334 23 59 464 1 1.857332496 0.208333333 0.166666667 0.305555556 60 0 0 72 X:5412823-5412979 6 spoon FBtr0070795 5412384 5414972 GTGCAA 6mer3-8 dme-miR-92b-3p X - 5412901 5412965 3'utr spoon FlyBase G48884.1 ACAACTTTTGGAGGGGCTGCCCTCCACACACTGTAGTGCAAATTCGTTTAATGGTTCCTCGTTTT 14 5412933 0.843143946 5 13 97 0.916666667 1.342422681 0.125 0.428571429 0.666666667 14 2 0 22 X:5412901-5412965 6 20.5 2903 FBgn0263987 8368.983333 240.6166667 372.13 0.002449521 0.085197756 0.055088276 2 3 2.5 0.25 dme-miR-999-3p 6mer3-8 AGTTAA X 5426559 5426564 + X_5426559_5426564_+ 0.999720754 0.997429108 0.998574931 0.001620477 CG4165 FBtr0070775|FBtr0340461|FBtr0070773|FBtr0340462|FBtr0070772 5426346|5426346|5426346|5426346|5426346 5426906|5426906|5426906|5427219|5426906 X + 5426542 5426615 3'utr CG4165 FlyBase G58932.1 TGGAACAAGCTTTAGTTAGTTAAATGATGCAAAGGAGTAGACACACGCACTCATGTTAAATTGTAGTTCTCAGG 15 5426566 0.986378326 10 11 92 0.722222222 0.812913357 0.333333333 0.133333333 0.277777778 15 4 1 13 X:5426542-5426615 6 CG4165 FBtr0340462|FBtr0070772|FBtr0340461|FBtr0070773|FBtr0070775 5426346|5426346|5426346|5426346|5426346 5427219|5426906|5426906|5426906|5426906 AGTTAA 6mer3-8 dme-miR-999-3p X + 5426536 5426584 3'utr CG4165 FlyBase G44572.1 TTTTTTTGGAACAAGCTTTAGTTAGTTAAATGATGCAAAGGAGTAGACA 6 5426561 0.977929237 6 6 42 1 1 0.1 0.5 0.7 6 0 0 10 X:5426536-5426584 6 7.5 2904 FBgn0029763 634.33 17.08666667 26.07333333 0.011823499 0.438938744 0.287650217 -7 -2 -4.5 0.25 dme-bantam-3p 7mer-m8 TGATCTC X 5685736 5685742 - X_5685736_5685742_- 0.485376818 0.661407328 0.573392073 0.12447236 CG3160 FBtr0070847 5685251 5685911 X - 5685665 5685776 3'utr CG3160 FlyBase G64925.1 CAGCGGGAAGTCCAAACTGAGCTCGGCTGGGCGTTGATCTCGATTTGCCCCGATCGCACGTTATATGTATTAATTGTTTTTACGCCTGCTGTCTGCTGCATTCGATTGGCGA 85 5685743 0.981849597 12 84 624 0.989473684 1.973127854 0.347368421 0.082352941 0.178947368 85 1 0 94 X:5685665-5685776 7 CG3160 FBtr0070847 5685251 5685911 TGATCTC 7mer-m8 dme-bantam-3p X - 5685700 5685761 3'utr CG3160 FlyBase G48928.1 ACTGAGCTCGGCTGGGCGTTGATCTCGATTTGCCCCGATCGCACGTTATATGTATTAATTGT 46 5685743 0.97796181 9 43 337 0.925 1.86923172 0.425 0.456521739 0.6875 46 6 0 74 X:5685700-5685761 7 60.5 2905 FBgn0029789 138.8966667 4.523333333 6.876666667 0.435575608 13.37509211 8.797867184 1 1 1 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA X 5708608 5708615 + X_5708608_5708615_+ 0.339098505 0.332695654 0.335897079 0.004527463 CG4096 FBtr0301084|FBtr0301083 5707646|5708513 5708633|5708633 X + 5708581 5708629 3'utr CG4096 FlyBase G58976.1 TTCAGCGAGTAAGCGATCATCCCAGATGTACTTAACTAACTATACGCAC 33 5708607 0.860656772 2 33 225 1 1.612783857 0 0.212121212 0.365853659 33 0 0 41 X:5708581-5708629 8 CG4096 FBtr0301084|FBtr0301083 5707646|5708513 5708633|5708633 GTACTTAA 8mer-A1 dme-miR-252-5p X + 5708582 5708629 3'utr CG4096 FlyBase G44613.1 TCAGCGAGTAAGCGATCATCCCAGATGTACTTAACTAACTATACGCAC 25 5708607 0.868937788 2 25 177 1 1.602059991 0.1 0.48 0.675 25 0 0 40 X:5708582-5708629 8 29 2906 FBgn0029791 34.02 1.16 1.753333333 0.852439741 25 16.53992395 1 1 1 0.25 dme-miR-283-5p 8mer-m1 TGATATTT X 5720040 5720047 - X_5720040_5720047_- 0.524439319 0.499309814 0.511874567 0.01776924 CG32758 FBtr0340670|FBtr0339525 5719372|5719734 5721627|5721627 X - 5720011 5720102 3'utr CG32758 FlyBase G64934.1 TTATAGAATGGCATATAGGCATACATTTATCAACGATGCAAGTGACGTCTGCTTGTGATATTTACAATTTACACGATTATTATGATTAATTT 171 5720050 0.848181391 16 160 1547 0.944186047 1.462397998 0.269767442 0.187134503 0.353488372 171 6 6 203 X:5720011-5720102 8 CG32758 FBtr0339525|FBtr0340670 5719734|5719372 5721627|5721627 TGATATTT 8mer-m1 dme-miR-283-5p X - 5720028 5720096 3'utr CG32758 FlyBase G48935.1 AATGGCATATAGGCATACATTTATCAACGATGCAAGTGACGTCTGCTTGTGATATTTACAATTTACACG 129 5720051 0.988979668 11 118 1168 0.878947368 1.377618431 0.273684211 0.317829457 0.536842105 129 17 6 167 X:5720028-5720096 8 141.5 2907 FBgn0052758 1999.443333 76.95666667 118.6333333 0.070769698 1.838697102 1.192750773 3 4 3.5 0.25 dme-miR-1007-3p 8mer-A1 TGAGCTTA X 5739327 5739334 - X_5739327_5739334_- 0.604617634 0.589391735 0.597004684 0.010766337 IntS6 FBtr0332400|FBtr0332399|FBtr0070842|FBtr0070841|FBtr0332401 5738661|5738661|5738661|5738661|5738661 5739981|5739981|5739981|5739981|5739981 X - 5739317 5739443 3'utr IntS6 FlyBase G64942.1 AAATTTACTCTTGAGCTTAGGAATAATTTTAAATAGACTTAGATAAATTAAGATAAATCTAAGTGTAGTGTATGTGTATAAAAAAAAAGGGAAAAGTTTAGGAAAAGCTTGAGCTTAATGAGCCCCA 17 5739334 0.979884822 11 17 119 1 1.301029996 0.25 0.176470588 0.3 17 0 0 20 X:5739317-5739443 8 IntS6 FBtr0332401|FBtr0070841|FBtr0070842|FBtr0332399|FBtr0332400 5738661|5738661|5738661|5738661|5738661 5739981|5739981|5739981|5739981|5739981 TGAGCTTA 8mer-A1 dme-miR-1007-3p X - 5739316 5739361 3'utr IntS6 FlyBase G48939.1 AAAAAAGGGAAAAGTTTAGGAAAAGCTTGAGCTTAATGAGCCCCAC 6 5739334 0.966603628 3 6 33 1 0.903089987 0 0.333333333 0.5 6 0 0 8 X:5739316-5739361 8 6.5 2908 FBgn0261383 1360.436667 27.15666667 41.81333333 0.004777878 0.239351909 0.155452806 0 0 0 0.25 dme-miR-11-3p 8mer-m1 CTGTGATG X 5739923 5739930 - X_5739923_5739930_- 0.455018946 0.414799853 0.434909399 0.028439128 IntS6 FBtr0332400|FBtr0332399|FBtr0070842|FBtr0070841|FBtr0332401 5738661|5738661|5738661|5738661|5738661 5739981|5739981|5739981|5739981|5739981 X - 5739911 5739958 3'utr IntS6 FlyBase G64946.1 AGCCCGCGGGGTCATCCAATCCATCTGTCTGTGATGTCAACAAAATCG 42 5739931 0.793148294 4 40 308 0.960784314 1.69019608 0.058823529 0.19047619 0.333333333 42 2 0 49 X:5739911-5739958 8 IntS6 FBtr0332401|FBtr0070841|FBtr0070842|FBtr0332399|FBtr0332400 5738661|5738661|5738661|5738661|5738661 5739981|5739981|5739981|5739981|5739981 CTGTGATG 8mer-m1 dme-miR-11-3p X - 5739911 5739963 3'utr IntS6 FlyBase G48942.2 CACTGAGCCCGCGGGGTCATCCAATCCATCTGTCTGTGATGTCAACAAAATCG 24 5739932 0.975410477 5 20 149 0.894736842 1.531478917 0.052631579 0.416666667 0.631578947 24 4 0 34 X:5739911-5739963 8 31 2909 FBgn0261383 1360.436667 27.15666667 41.81333333 0.022786801 1.141524488 0.741390306 1 2 1.5 0.25 dme-miR-317-3p 7mer-m8 TGTGTTC X 5873919 5873925 - X_5873919_5873925_- 0.660840766 0.659673384 0.660257075 0.000825476 mof FBtr0070829 5873838 5874268 X - 5873868 5874046 3'utr mof FlyBase G64986.1 TTAAGGAGTTTTACGGATAGGCTGTTGTAACTCTTAATGATAGAACCAAATGTCTAATTCGTTTGGCTAATGTTTTTGGAGAGGGAATTTGGAACAACCATTTAAAAATTTTAAAAACTTCTGTGTTCTTGAAATATATATCTTTAACTACTTTATCTCGAAAAACTCTGGACTTGTTA 90 5873918 0.988649972 22 85 805 0.954545455 1.544068044 0.081818182 0.2 0.345454545 90 3 2 105 X:5873868-5874046 7 mof FBtr0070829 5873838 5874268 TGTGTTC 7mer-m8 dme-miR-317-3p X - 5873899 5873973 3'utr mof FlyBase G48975.1 TTTTGGAGAGGGAATTTGGAACAACCATTTAAAAATTTTAAAAACTTCTGTGTTCTTGAAATATATATCTTTAAC 50 5873927 0.799905759 12 46 445 0.892307692 1.763427994 0.015384615 0.26 0.430769231 50 7 0 58 X:5873899-5873973 7 51 2910 FBgn0014340 384.9966667 15.43 23.56333333 0.132468679 3.305249514 2.164379686 -7 2 -2.5 0.25 dme-miR-1008-3p 6mer3-8 AGCTGT X 5877095 5877100 - X_5877095_5877100_- 0.999999501 0.613744612 0.806872056 0.273123459 CG3016 FBtr0343537|FBtr0070828 5876998|5876998 5877429|5877429 X - 5877080 5877119 3'utr CG3016 FlyBase G64998.1 AAATTCATGCCGTGCTTTTAGCTGTCTGTATTTAGCAATG 11 5877102 0.647605168 7 11 111 1 1.230448921 0.470588235 0.272727273 0.529411765 11 0 0 17 X:5877080-5877119 6 CG3016 FBtr0343537|FBtr0070828 5876998|5876998 5877429|5877429 AGCTGT 6mer3-8 dme-miR-1008-3p X - 5877092 5877132 3'utr CG3016 FlyBase G48981.1 TTTTAAGAATTCCAAATTCATGCCGTGCTTTTAGCTGTCTG 7 5877102 0.98989689 3 5 52 0.875 0.84509804 0 0.142857143 0.25 7 1 0 7 X:5877092-5877132 6 7.5 2911 FBgn0029819 234.6666667 12.53666667 19.16 0.031960227 0.598245148 0.391440501 2 2 2 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 5877399 5877405 - X_5877399_5877405_- 0.455189143 0.49775121 0.476470177 0.03009595 CG3016 FBtr0343537|FBtr0070828 5876998|5876998 5877429|5877429 X - 5877327 5877461 stop_codon CG3016 FlyBase G65001.1 GTGGCCAGCAGAGGCAGCTAAATCTGCGCTAGTCAGGTGTAGGTCGTCGGTATTATTCTAGTCCATACTTTTGATGTGATGAATATGAATATCCGAAACCAAATCCTTTTCGTCGAACGGTGGCCATAGCAAACA 103 5877406 0.802965481 14 101 895 0.976377953 1.792391689 0.196850394 0.174757282 0.330708661 103 2 1 124 X:5877327-5877461 7 CG3016 FBtr0343537|FBtr0070828 5876998|5876998 5877429|5877429 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X - 5877378 5877461 stop_codon CG3016 FlyBase G48985.1 GTGGCCAGCAGAGGCAGCTAAATCTGCGCTAGTCAGGTGTAGGTCGTCGGTATTATTCTAGTCCATACTTTTGATGTGATGAAT 41 5877406 0.988379341 9 41 372 1 1.799340549 0.253968254 0.463414634 0.650793651 41 0 0 63 X:5877378-5877461 7 57 2912 FBgn0029819 234.6666667 12.53666667 19.16 0.242897727 4.546663122 2.974947808 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA X 5883108 5883115 + X_5883108_5883115_+ 0.609050774 0.583976132 0.596513453 0.01773049 CG16721 FBtr0339948|FBtr0339948|FBtr0339948|FBtr0345313|FBtr0345313|FBtr0345313|FBtr0070821|FBtr0070821|FBtr0070821 5882788|5882788|5882788|5882788|5882788|5882788|5882788|5882788|5882788 5883391|5883391|5883391|5883391|5883391|5883391|5883391|5883391|5883391 X + 5883041 5883212 3'utr CG16721 FlyBase G58998.1 AATCCCCCTGCAAAAAAGCCAGTGGGATCCGAGGCATCTGAAAGGAATCAAAAATGTGCTGGAGCGTCTGTGATAACAAGAATATTCAACACAAAATTCAAATTTTTGGGGGTTAAGAAAAGTGAACTCGTGAATTATGTGTGCTCCTCAATTTTCGTAATGTAAACCCCCT 116 5883107 0.982662307 22 107 773 0.918518519 1.491361694 0.066666667 0.146551724 0.266666667 116 8 3 124 X:5883041-5883212 8 CG16721 FBtr0070821|FBtr0070821|FBtr0070821|FBtr0345313|FBtr0345313|FBtr0345313|FBtr0339948|FBtr0339948|FBtr0339948 5882788|5882788|5882788|5882788|5882788|5882788|5882788|5882788|5882788 5883391|5883391|5883391|5883391|5883391|5883391|5883391|5883391|5883391 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X + 5883083 5883120 3'utr CG16721 FlyBase G44629.1 AGGAATCAAAAATGTGCTGGAGCGTCTGTGATAACAAG 43 5883107 0.719263795 5 39 229 0.919354839 1.755874856 0.080645161 0.325581395 0.532258065 43 5 0 57 X:5883083-5883120 8 61 2913 FBgn0029820 507.81 24.94 37.79666667 0.120123668 2.445870088 1.613898933 1 1 1 0.25 dme-miR-970-3p 6mer2-7 CTTATG X 5904390 5904395 + X_5904390_5904395_+ 0.744742368 0.649813661 0.697278015 0.067124727 Act5C FBtr0100663|FBtr0070823|FBtr0100662|FBtr0345894 5903827|5903827|5903827|5903827 5904464|5905227|5904788|5905399 X + 5904245 5904463 3'utr Act5C FlyBase G59005.1 AGCTTACACACACACATTCGCGGCATGACAAGGACATCAAGATAAAGAAGAACTTAAAGAAGATATTTCCCAAAGCGCAAAAAGAACACACACACATTGCAAAACACAAACAACACACTAGCGTTTTGTACAATTCGTCAGCAACCTTATGTATTATTTTTTAATTATGATGTAATTATAAACAAAGTGAAACAAAAATATGAAAACAAAAAGGAAAAT 238 5904392 0.956565088 39 219 1672 0.928057554 1.411619706 0.053956835 0.138655462 0.262589928 238 11 9 258 X:5904245-5904463 6 Act5C FBtr0345894|FBtr0100662|FBtr0070823|FBtr0100663 5903827|5903827|5903827|5903827 5905399|5904788|5905227|5904464 CTTATG 6mer2-7 dme-miR-970-3p X + 5904248 5904459 3'utr Act5C FlyBase G44637.1 TTACACACACACATTCGCGGCATGACAAGGACATCAAGATAAAGAAGAACTTAAAGAAGATATTTCCCAAAGCGCAAAAAGAACACACACACATTGCAAAACACAAACAACACACTAGCGTTTTGTACAATTCGTCAGCAACCTTATGTATTATTTTTTAATTATGATGTAATTATAAACAAAGTGAAACAAAAATATGAAAACAAAAAGGA 135 5904392 0.980176313 33 123 961 0.921052632 1.544068044 0.036842105 0.311111111 0.510526316 135 11 4 175 X:5904248-5904459 6 87.5 2914 FBgn0000042 40624.21333 2527.44 3863.87 0.002153888 0.034620011 0.022645689 -2 -2 -2 0.25 dme-miR-999-3p 6mer3-8 AGTTAA X 5910741 5910746 + X_5910741_5910746_+ 0.998550291 0.997584052 0.998067172 0.000683207 CG12236 FBtr0070826 5910640 5911789 X + 5910620 5910825 stop_codon CG12236 FlyBase G59018.1 GGCCATCAAGACGGAGAACTGATGCGTCTTCATAAGTCTCGGTCGCCTGCGAGCCGCATCTGGATCTGCAACTGCATCTGGATTGAGATCGATAGGATATACGGATAGGGGAGAGAGATATAGTTAATTACGTCCAGCTTAGCGAGCAGCCAGCAAAACCAATCAACCCAACCAGCCCATTCCCTCGTGTTTCGATCAAAGGCCCC 82 5910740 0.977207903 21 75 494 0.913043478 1.924279286 0.141304348 0.085365854 0.184782609 82 8 0 84 X:5910620-5910825 6 CG12236 FBtr0070826 5910640 5911789 AGTTAA 6mer3-8 dme-miR-999-3p X + 5910684 5910825 3'utr CG12236 FlyBase G44649.1 TCTGCAACTGCATCTGGATTGAGATCGATAGGATATACGGATAGGGGAGAGAGATATAGTTAATTACGTCCAGCTTAGCGAGCAGCCAGCAAAACCAATCAACCCAACCAGCCCATTCCCTCGTGTTTCGATCAAAGGCCCC 43 5910747 0.973826228 11 43 267 1 1.838849091 0.028985507 0.465116279 0.666666667 43 0 0 69 X:5910684-5910825 6 43.5 2915 FBgn0029822 534.9233333 22.61666667 34.62 0.081320065 1.923360354 1.256499133 1 -6 -2.5 0.25 dme-miR-33-5p 7mer-A1 AATGCAA X 5910857 5910863 + X_5910857_5910863_+ 0.779066901 0.782246879 0.78065689 0.0022486 CG12236 FBtr0070826 5910640 5911789 X + 5910826 5910876 3'utr CG12236 FlyBase G59019.1 AAAACGAAAACTAGCCAAATTTGTCAACTTAAATGCAAAGCAGATAGGAGT 14 5910855 0.952703307 5 12 81 0.857142857 1.079181246 0.214285714 0 0 14 2 0 12 X:5910826-5910876 7 CG12236 FBtr0070826 5910640 5911789 AATGCAA 7mer-A1 dme-miR-33-5p X + 5910827 5910875 3'utr CG12236 FlyBase G44650.1 AAACGAAAACTAGCCAAATTTGTCAACTTAAATGCAAAGCAGATAGGAG 7 5910855 0.891859222 3 6 35 0.769230769 1 0.076923077 0.428571429 0.692307692 7 3 0 10 X:5910827-5910875 7 8 2916 FBgn0029822 534.9233333 22.61666667 34.62 0.014955414 0.353721444 0.2310803 2 2 2 0.25 dme-miR-283-5p 8mer-A1 TGATATTA X 5911354 5911361 + X_5911354_5911361_+ 0.577473437 0.584842535 0.581157986 0.005210741 CG12236 FBtr0070826 5910640 5911789 X + 5911290 5911360 3'utr CG12236 FlyBase G59023.1 CTTAGCCCATATCGATCACTTTATTTTAGCTCTTAAACAACCTCATATGTATTTTTTGAAACTCTGATATT 16 5911333 0.991304349 9 15 163 0.941176471 0.903089987 0.058823529 0.0625 0.117647059 16 0 1 16 X:5911290-5911360 7 CG12236 FBtr0070826 5910640 5911789 TGATATTA 8mer-A1 dme-miR-283-5p X + 5911307 5911434 3'utr CG12236 FlyBase G44654.1 ACTTTATTTTAGCTCTTAAACAACCTCATATGTATTTTTTGAAACTCTGATATTATTCAGTTTTTGTATATAGAGCTAGGCAACTTAACCTAAATTAAGGTAAACCCAAAAACAAAGTCCCCCCTCCA 17 5911334 0.986087962 11 16 140 1 1.322219295 0.285714286 0.235294118 0.380952381 17 0 0 21 X:5911307-5911434 8 1.5 2917 FBgn0029822 534.9233333 22.61666667 34.62 0.00280414 0.066322771 0.043327556 21 20 20.5 0.25 dme-miR-932-5p 6mer3-8 GGAATT X 5913105 5913110 - X_5913105_5913110_- 0.992662569 0.999326324 0.995994446 0.004711947 CG3011 FBtr0290235|FBtr0070827|FBtr0345317 5913065|5913065|5913065 5913196|5913196|5913196 X - 5913074 5913130 3'utr CG3011 FlyBase G65006.1 GCTTGTTAATATCATAAGTGGGAATTAGTAGTTAAGCCATTAAACGCATTTCAGTTT 17 5913116 0.989521122 6 15 147 0.9 0.954242509 0.3 0.117647059 0.25 17 1 1 18 X:5913074-5913130 6 CG3011 FBtr0070827|FBtr0345317|FBtr0290235 5913065|5913065|5913065 5913196|5913196|5913196 GGAATT 6mer3-8 dme-miR-932-5p X - 5913075 5913148 3'utr CG3011 FlyBase G48988.1 TACATCCTCGAAAAGTCCGCTTGTTAATATCATAAGTGGGAATTAGTAGTTAAGCCATTAAACGCATTTCAGTT 15 5913116 0.980095211 10 15 110 1 1.342422681 0 0.466666667 0.636363636 15 0 0 22 X:5913075-5913148 6 13 2918 FBgn0029823 724.9866667 47.58333333 72.74 0.017931364 0.273204904 0.178718724 6 6 6 0.25 dme-bantam-3p 6mer3-8 TGATCT X 5941596 5941601 + X_5941596_5941601_+ 0.895171034 0.978265854 0.936718444 0.058756967 CG3726 FBtr0343051|FBtr0070858 5941403|5941362 5941852|5941664 X + 5941492 5941622 3'utr CG3726 FlyBase G59037.1 AAAGACAGCTAGACGAGGCTAGTTTTGGATCCTGAGTAATGCTTTCCTGAATCCTGAATTCCCACATTAATGTGTTGTTCCCATCGGTGGGTCACAACTATAACTGATCTACACATTTAGGATCTTATTAT 29 5941596 0.745693469 15 28 195 0.96875 1.491361694 0.0625 0.103448276 0.1875 29 1 0 31 X:5941492-5941622 6 CG3726 FBtr0343051|FBtr0070858 5941403|5941362 5941852|5941664 TGATCT 6mer3-8 dme-bantam-3p X + 5941529 5941623 3'utr CG3726 FlyBase G44662.1 AATGCTTTCCTGAATCCTGAATTCCCACATTAATGTGTTGTTCCCATCGGTGGGTCACAACTATAACTGATCTACACATTTAGGATCTTATTATT 16 5941598 0.985706042 8 14 126 0.888888889 1.204119983 0.111111111 0.125 0.222222222 16 2 0 16 X:5941529-5941623 6 8.5 2919 FBgn0029824 462.5733333 18.42 28.35333333 0.018375465 0.46145494 0.299788385 0 -2 -1 0.25 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA X 5944411 5944418 + X_5944411_5944418_+ 0.625066589 0.624345398 0.624705994 0.000509965 CG12728 FBtr0343052 5944386 5945250 X + 5944260 5944448 stop_codon CG12728 FlyBase G59047.1 AGTCCGATCAGAATTGGGATTTAATTCTTCGAACTGTGCTGGAAGATATCAAAGCCGTACTGATTTACTCAACTGAACGCATCGAAAAAGCGATCCAGAGCTATATCAATAAGTTAGCGCAAAAATAATTTGGAAACGATCTCATTCTAAATGGTGCTACAAGCAAAACTTCACACTTAGTACATACGT 213 5944410 0.982954048 25 191 1452 0.911290323 1.655138435 0.177419355 0.14084507 0.262096774 213 18 4 226 X:5944260-5944448 8 CG12728 FBtr0070859|FBtr0343052 5944386|5944386 5944622|5945250 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" X + 5944287 5944441 stop_codon CG12728 FlyBase G44671.1 TTCGAACTGTGCTGGAAGATATCAAAGCCGTACTGATTTACTCAACTGAACGCATCGAAAAAGCGATCCAGAGCTATATCAATAAGTTAGCGCAAAAATAATTTGGAAACGATCTCATTCTAAATGGTGCTACAAGCAAAACTTCACACTTAGTA 125 5944410 0.855694508 20 113 848 0.920903955 1.367089564 0.169491525 0.304 0.508474576 125 8 6 163 X:5944287-5944441 8 76 2920 FBgn0029825 316.1666667 16.35666667 25.15 0.240379547 4.646423477 3.021868787 1 1 1 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 5944791 5944796 + X_5944791_5944796_+ 0.863027195 0.859023305 0.86102525 0.002831185 CG12728 FBtr0343052 5944386 5945250 X + 5944766 5944823 3'utr CG12728 FlyBase G59050.1 AGTGTTGTAGATTTTAAAACGTCTTACCAAAACACCCTCAGTACACAAACAAGTTGAG 6 5944789 0.948365264 3 4 29 0.857142857 0.77815125 0.285714286 0.166666667 0.285714286 6 1 0 6 X:5944766-5944823 6 CG12728 FBtr0343052 5944386 5945250 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 5944758 5944806 3'utr CG12728 FlyBase G44675.1 CAATGTATAGTGTTGTAGATTTTAAAACGTCTTACCAAAACACCCTCAG 10 5944790 0.916403571 4 10 40 1 1.204119983 0.125 0.6 0.75 10 0 0 16 X:5944758-5944806 6 6.5 2921 FBgn0029825 316.1666667 16.35666667 25.15 0.020558777 0.397391482 0.258449304 2 1 1.5 0.25 dme-miR-33-5p 7mer-m8 CAATGCA X 5944970 5944976 + X_5944970_5944976_+ 0.514549822 0.503787422 0.509168622 0.007610166 CG12728 FBtr0343052 5944386 5945250 X + 5944927 5944995 3'utr CG12728 FlyBase G59052.1 CGACCGATTAGTCAGGGCTTTCCAGCGGTTATAACCTCCTGATCAATGCATTTTATGTTAAATATTTTT 55 5944969 0.809215622 11 52 463 0.940298507 1.322219295 0.014925373 0.163636364 0.313432836 55 2 2 63 X:5944927-5944995 7 CG12728 FBtr0343052 5944386 5945250 CAATGCA 7mer-m8 dme-miR-33-5p X + 5944935 5944990 3'utr CG12728 FlyBase G44677.1 TAGTCAGGGCTTTCCAGCGGTTATAACCTCCTGATCAATGCATTTTATGTTAAATA 38 5944969 0.820869976 8 36 286 0.953125 1.183269844 0.03125 0.447368421 0.671875 38 0 3 61 X:5944935-5944990 7 43 2922 FBgn0029825 316.1666667 16.35666667 25.15 0.136004217 2.628897493 1.709741551 1 1 1 0.25 dme-bantam-3p 6mer3-8 TGATCT X 5945238 5945243 + X_5945238_5945243_+ 0.53752711 0.965021159 0.751274135 0.302283977 CG12728 FBtr0343052 5944386 5945250 X + 5945219 5945256 3'utr CG12728 FlyBase G59054.1 GGTGGGTCACAACTATAACTGATCTACACATTTAGGAT 6 5945237 0.965830062 4 6 33 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 X:5945219-5945256 6 CG12728 FBtr0343052 5944386 5945250 TGATCT 6mer3-8 dme-bantam-3p X + 5945202 5945247 3'utr CG12728 FlyBase G44679.1 AATGTGTTGTTCCCATCGGTGGGTCACAACTATAACTGATCTACAC 11 5945239 0.721349094 5 10 63 0.933333333 0.84509804 0 0.363636364 0.533333333 11 0 1 14 X:5945202-5945247 6 7 2923 FBgn0029825 316.1666667 16.35666667 25.15 0.022140221 0.427960057 0.27833002 1 -1 0 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 5947639 5947644 + X_5947639_5947644_+ 0.837744595 0.963634407 0.900689501 0.089017531 CG32756 FBtr0070860|FBtr0343295 5947414|5947414 5947851|5948353 X + 5947590 5947663 3'utr CG32756 FlyBase G59067.1 AAATGAAACAAAACAATGTATAGTGTTGTAGATTTTAAAACGACATCTTACCAAAACACCCTCAGTACACAAAC 36 5947638 0.952006227 9 34 152 0.974358974 1.579783597 0.051282051 0.083333333 0.153846154 36 1 0 38 X:5947590-5947663 6 CG32756 FBtr0343295|FBtr0070860 5947414|5947414 5948353|5947851 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 5947627 5947663 3'utr CG32756 FlyBase G44689.1 AAACGACATCTTACCAAAACACCCTCAGTACACAAAC 21 5947638 0.702096727 3 19 63 0.942857143 1.51851394 0.028571429 0.476190476 0.685714286 21 2 0 33 X:5947627-5947663 6 25 2924 FBgn0052756 250.4866667 13.61 20.71333333 0.099805712 1.836884644 1.206952044 1 1 1 0.25 dme-miR-283-5p 8mer-A1 TGATATTA X 5947724 5947731 + X_5947724_5947731_+ 0.589556454 0.587573238 0.588564846 0.001402405 CG32756 FBtr0070860|FBtr0343295 5947414|5947414 5947851|5948353 X + 5947686 5947748 3'utr CG32756 FlyBase G59068.1 AGCAGCAACTAACTCCTATCTCTATGGAACATATCGACTGATATTAAAATGCGTCCGATTAGT 152 5947727 0.693801718 11 145 926 0.960591133 2.290034611 0.009852217 0.276315789 0.458128079 152 8 0 195 X:5947686-5947748 8 CG32756 FBtr0343295|FBtr0070860 5947414|5947414 5948353|5947851 TGATATTA 8mer-A1 dme-miR-283-5p X + 5947695 5947791 3'utr CG32756 FlyBase G44690.1 TAACTCCTATCTCTATGGAACATATCGACTGATATTAAAATGCGTCCGATTAGTCACGGCTTTCCAACGGTTATAGCCTCCTGATCAATGCATTTTA 131 5947727 0.616512411 12 125 830 0.967032967 1.944482672 0.027472527 0.290076336 0.489010989 131 5 1 176 X:5947695-5947791 8 135 2925 FBgn0052756 250.4866667 13.61 20.71333333 0.538950842 9.919177076 6.517541036 -3 -3 -3 0.25 dme-miR-14-3p 8mer-A1 AAGACTGA X 6035871 6035878 - X_6035871_6035878_- 0.475553439 0.623994659 0.549774049 0.10496385 rux FBtr0307288|FBtr0070889 6035751|6035751 6035992|6035992 X - 6035849 6035893 3'utr rux FlyBase G65031.1 CGTAATTATTTGAACAAGACTGATTGCACCCGCTTTGGTTCCGCT 68 6035870 0.719913162 9 60 454 0.897435897 1.544068044 0.012820513 0.117647059 0.230769231 68 7 1 70 X:6035849-6035893 8 rux FBtr0307288|FBtr0070889 6035751|6035751 6035992|6035992 AAGACTGA 8mer-A1 dme-miR-14-3p X - 6035850 6035893 3'utr rux FlyBase G49011.1 CGTAATTATTTGAACAAGACTGATTGCACCCGCTTTGGTTCCGC 66 6035870 0.689173382 6 57 431 0.852941176 1.939519253 0.068627451 0.46969697 0.656862745 66 15 0 87 X:6035850-6035893 8 66.5 2926 FBgn0003302 80.70666667 7.456666667 11.36 0.823971584 8.91819401 5.853873239 -8 -8 -8 0.25 dme-miR-190-5p 6mer2-7 CATATC X 611021 611026 - X_611021_611026_- 0.925746527 0.751471684 0.838609106 0.123230893 CG13366 FBtr0339433|FBtr0110791|FBtr0339431|FBtr0339432|FBtr0070161|FBtr0339430 610547|610547|610547|610547|610547|610547 611251|611251|611251|611251|611251|611251 X - 610953 611093 3'utr CG13366 FlyBase G63851.1 TCTCCAATTCCTCTAGCTTGTACACTTTTTTCCTGTAAAGCCTCTTCTGCTTTAGTGCGTCTGATTCCATATCCTTGCCCATGTATAATGGTCGTCCGATGCAGCGCCCCATATTCAGACATCGCTACTTTTAAATATCAT 22 611040 0.989923359 14 19 196 0.923076923 1.079181246 0.153846154 0.181818182 0.307692308 22 1 1 24 X:610953-611093 6 CG13366 FBtr0110791|FBtr0339433|FBtr0339430|FBtr0070161|FBtr0339432|FBtr0339431 610547|610547|610547|610547|610547|610547 611251|611251|611251|611251|611251|611251 CATATC 6mer2-7 dme-miR-190-5p X - 610981 611067 3'utr CG13366 FlyBase G48128.1 TTTTTCCTGTAAAGCCTCTTCTGCTTTAGTGCGTCTGATTCCATATCCTTGCCCATGTATAATGGTCGTCCGATGCAGCGCCCCATA 12 611038 0.986741672 7 11 111 0.9375 1.176091259 0 0.333333333 0.5 12 1 0 15 X:610981-611067 6 6.5 2927 FBgn0025633 323.6666667 8.64 13.25333333 0.020082389 0.752314815 0.490442656 14 12 13 0.25 dme-miR-8-3p 7mer-A1 AGTATTA X 6223122 6223128 - X_6223122_6223128_- 0.783232718 0.820733497 0.801983108 0.02651707 sqh FBtr0339502|FBtr0339503|FBtr0070877|FBtr0339504|FBtr0345294 6223059|6223059|6223059|6223059|6223059 6223406|6223406|6223406|6223406|6223406 X - 6223103 6223220 3'utr sqh FlyBase G65056.2 AGTAGCCAACACCAGCGATTGTTATGTACGACAGTGTAGTGTGTGAGATGTTGGTGCCAGATAACACGATTTCCCGAAAAACTCCTTTCATAAGTATTAACTCATTGAATATACATAT 78 6223130 0.762012548 24 73 558 0.955555556 1.934498451 0.088888889 0.128205128 0.244444444 78 4 0 86 X:6223103-6223220 7 sqh FBtr0345294|FBtr0070877|FBtr0339504|FBtr0339502|FBtr0339503 6223059|6223059|6223059|6223059|6223059 6223406|6223406|6223406|6223406|6223406 AGTATTA 7mer-A1 dme-miR-8-3p X - 6223068 6223188 3'utr sqh FlyBase G49023.1 AGTGTAGTGTGTGAGATGTTGGTGCCAGATAACACGATTTCCCGAAAAACTCCTTTCATAAGTATTAACTCATTGAATATACATATATATTACCTATATACAAATACATACTTATACAAGA 48 6223130 0.985277353 16 44 360 0.942857143 1.51851394 0.185714286 0.291666667 0.514285714 48 3 1 66 X:6223068-6223188 7 38 2928 FBgn0003514 2178.836667 260.73 395.3566667 0.0174405 0.14574464 0.096115744 2 2 2 0.25 dme-miR-252-5p 7mer-m8 GTACTTA X 6223245 6223251 - X_6223245_6223251_- 0.513440067 0.576480413 0.54496024 0.044576224 sqh FBtr0339502|FBtr0339503|FBtr0070877|FBtr0339504|FBtr0345294 6223059|6223059|6223059|6223059|6223059 6223406|6223406|6223406|6223406|6223406 X - 6223232 6223290 3'utr sqh FlyBase G65057.1 TGGTTTCGCGCCTTCTGTTCTTTGATTCCTGATAATCCTGTACTTATCCGTGCATTTGA 34 6223252 0.743927985 11 31 313 0.921052632 1.544068044 0.263157895 0.117647059 0.210526316 34 3 0 35 X:6223232-6223290 7 sqh FBtr0345294|FBtr0070877|FBtr0339504|FBtr0339502|FBtr0339503 6223059|6223059|6223059|6223059|6223059 6223406|6223406|6223406|6223406|6223406 GTACTTA 7mer-m8 dme-miR-252-5p X - 6223197 6223299 3'utr sqh FlyBase G49024.1 TTTTTTTTTTGGTTTCGCGCCTTCTGTTCTTTGATTCCTGATAATCCTGTACTTATCCGTGCATTTGAATTAAACAAAAAGTAGCCAACACCAGCGATTGTTA 28 6223252 0.989476832 14 27 256 0.973684211 1.568201724 0.368421053 0.321428571 0.5 28 1 0 37 X:6223197-6223299 7 19.5 2929 FBgn0003514 2178.836667 260.73 395.3566667 0.00894973 0.074790013 0.049322553 1 1 1 0.25 dme-miR-305-3p 8mer-m1 ATGTGCCG X 6232071 6232078 + X_6232071_6232078_+ 0.599167207 0.500246418 0.549706813 0.069947568 CG14446 FBtr0339696|FBtr0307164|FBtr0307165|FBtr0339697 6231056|6231056|6231056|6231317 6236218|6236004|6233166|6233166 X + 6232044 6232122 5'utr CG14446 FlyBase G59085.1 GTTAAGAGAAAGAGGAGAGTTTCCAAAATGTGCCGGGCACCGCTCCCAAAAGTCGCTAGAACTTAAAAACTGAATAATA 20 6232073 0.941481757 8 18 74 0.9 1.255272505 0.05 0 0 20 2 0 18 X:6232044-6232122 8 CG14446 FBtr0339697|FBtr0307165|FBtr0307164|FBtr0339696 6231317|6231056|6231056|6231056 6233166|6233166|6236004|6236218 ATGTGCCG 8mer-m1 dme-miR-305-3p X + 6232061 6232104 5'utr CG14446 FlyBase G44702.1 AGTTTCCAAAATGTGCCGGGCACCGCTCCCAAAAGTCGCTAGAA 8 6232072 0.917495496 3 6 22 0.888888889 0.903089987 0.111111111 0.125 0.222222222 8 1 0 8 X:6232061-6232104 8 9.5 2930 FBgn0262730 931.1666667 14.78666667 22.41333333 0.010202255 0.642470694 0.423854848 -2 -1 -1.5 0.25 dme-miR-1007-3p 7mer-m8 TGAGCTT X 6232393 6232399 + X_6232393_6232399_+ 0.575076785 0.573557999 0.574317392 0.001073954 CG14446 FBtr0339696|FBtr0307164|FBtr0307165|FBtr0339697 6231056|6231056|6231056|6231317 6236218|6236004|6233166|6233166 X + 6232366 6232430 5'utr CG14446 FlyBase G59087.1 AGATCACAAATAATATATAGACGCTTATGAGCTTTATTTGATCGATTGCATTGAAAAGGAAGCAG 54 6232393 0.781181534 7 51 419 0.956521739 1.51851394 0.420289855 0.240740741 0.405797101 54 2 1 66 X:6232366-6232430 7 CG14446 FBtr0339697|FBtr0307165|FBtr0307164|FBtr0339696 6231317|6231056|6231056|6231056 6233166|6233166|6236004|6236218 TGAGCTT 7mer-m8 dme-miR-1007-3p X + 6232373 6232445 5'utr CG14446 FlyBase G44703.1 AAATAATATATAGACGCTTATGAGCTTTATTTGATCGATTGCATTGAAAAGGAAGCAGCTAAAAGCAGAACAG 49 6232393 0.985362777 5 48 396 0.987951807 1.612783857 0.457831325 0.469387755 0.686746988 49 0 1 82 X:6232373-6232445 7 41 2931 FBgn0262730 931.1666667 14.78666667 22.41333333 0.044030786 2.77276826 1.829268293 0 0 0 0.25 dme-miR-34-5p 8mer-A1 CACTGCCA X 6233806 6233813 + X_6233806_6233813_+ 0.676862477 0.676663163 0.67676282 0.000140926 CG14446 FBtr0339696|FBtr0307164 6231056|6231056 6236218|6236004 X + 6233783 6234107 3'utr CG14446 FlyBase G59096.1 CACACACACTCTCAGTCGAGCTGCACTGCCATTGGTGAAAGTGAAAATGAGATTTAGGCCTATTGAAGCTTCCAGCATTTACCAGTGCCATAACTTTATAACTTTATATAACTTTACCCGCACGCCCAGCCCAGCCCAGTATGCCGATCAATCCGATCGATTGATCTCGGCTAGCATCGAGCTTAGCACTAGCTTTCTTCCGAGCTTGCTTGTTGGACAGACAGTGAGAACGAACGAAGAGACATCAGCCTCCATCCATTAAAGAACTTAGTCTTAGCCGATCTGGAGTCCAAAATTTCATTGGAAATTCCGCCATGCGGATCGG 125 6233814 0.97123952 35 119 742 0.95483871 1.86923172 0.367741935 0.2 0.35483871 125 6 1 148 X:6233783-6234107 8 CG14446 FBtr0307164|FBtr0339696 6231056|6231056 6236004|6236218 CACTGCCA 8mer-A1 dme-miR-34-5p X + 6233761 6233894 3'utr CG14446 FlyBase G44711.1 ATCGAAACATACACCAACACACCACACACACTCTCAGTCGAGCTGCACTGCCATTGGTGAAAGTGAAAATGAGATTTAGGCCTATTGAAGCTTCCAGCATTTACCAGTGCCATAACTTTATAACTTTATATAAC 44 6233814 0.971073238 12 42 245 0.948051948 1.86332286 0.480519481 0.454545455 0.688311688 44 4 0 73 X:6233761-6233894 8 34 2932 FBgn0262730 931.1666667 14.78666667 22.41333333 0.036513335 2.299368801 1.516954194 -8 -8 -8 0.25 dme-miR-33-5p 8mer-A1 CAATGCAA X 6234242 6234249 + X_6234242_6234249_+ 0.630360141 0.515550048 0.572955094 0.081183 CG14446 FBtr0339696|FBtr0307164 6231056|6231056 6236218|6236004 X + 6234131 6234266 3'utr CG14446 FlyBase G59097.1 GGCGTGAGGCGATTGATGACTATTAGCATTTTTAATCTAGACAAATGCTTGGCTTCAATTCGCGGATCGGCTTAATCCTTCTTGTACTTGTATGTATGTGTTTAACGATTCCAATGCAAAGACTTTTATATATCTT 66 6234256 0.985656986 16 62 513 0.949367089 1.875061263 0.151898734 0.151515152 0.291139241 66 4 0 75 X:6234131-6234266 8 CG14446 FBtr0307164|FBtr0339696 6231056|6231056 6236004|6236218 CAATGCAA 8mer-A1 dme-miR-33-5p X + 6234179 6234274 3'utr CG14446 FlyBase G44713.1 TTGGCTTCAATTCGCGGATCGGCTTAATCCTTCTTGTACTTGTATGTATGTGTTTAACGATTCCAATGCAAAGACTTTTATATATCTTTTTTTTTT 62 6234256 0.744168607 13 58 510 0.951807229 1.420505837 0.072289157 0.290322581 0.469879518 62 2 2 79 X:6234179-6234274 8 46 2933 FBgn0262730 931.1666667 14.78666667 22.41333333 0.049400394 3.11091073 2.052349792 -14 -14 -14 0.25 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 6234381 6234388 + X_6234381_6234388_+ 0.631111793 0.631083287 0.63109754 2.02E-05 CG14446 FBtr0339696|FBtr0307164 6231056|6231056 6236218|6236004 X + 6234332 6234424 3'utr CG14446 FlyBase G59098.1 TATTGTTTAGCATGTTTCGACTGCAATTTAAGCCGAATTTTAGATCTTCTCTAGTCAGTTCAAAGCGTTTTTTGTTCGTTTTGTCACGCCCAT 71 6234380 0.986109137 16 62 598 0.894117647 1.579783597 0.164705882 0.183098592 0.317647059 71 8 1 76 X:6234332-6234424 8 CG14446 FBtr0307164|FBtr0339696 6231056|6231056 6236004|6236218 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X + 6234328 6234400 3'utr CG14446 FlyBase G44714.1 ACATTATTGTTTAGCATGTTTCGACTGCAATTTAAGCCGAATTTTAGATCTTCTCTAGTCAGTTCAAAGCGTT 47 6234380 0.989183898 12 41 394 0.904109589 1.217483944 0.191780822 0.446808511 0.643835616 47 4 3 66 X:6234328-6234400 8 53 2934 FBgn0262730 931.1666667 14.78666667 22.41333333 0.056917845 3.584310189 2.364663891 1 1 1 0.25 dme-miR-1008-3p 6mer3-8 AGCTGT X 6234539 6234544 + X_6234539_6234544_+ 0.813490391 0.794881763 0.804186077 0.013158267 CG14446 FBtr0339696|FBtr0307164 6231056|6231056 6236218|6236004 X + 6234513 6234557 3'utr CG14446 FlyBase G59099.1 CTGCCACGCCCCCGCCCCTAAACCTAAGCTGTATGTACTTGTATG 11 6234531 0.898269003 2 10 34 0.909090909 1 0.272727273 0 0 11 1 0 10 X:6234513-6234557 6 CG14446 FBtr0307164|FBtr0339696 6231056|6231056 6236004|6236218 AGCTGT 6mer3-8 dme-miR-1008-3p X + 6234525 6234558 3'utr CG14446 FlyBase G44716.1 CGCCCCTAAACCTAAGCTGTATGTACTTGTATGT 7 6234546 0.982149164 2 6 55 0.818181818 0.954242509 0.363636364 0.571428571 0.727272727 7 2 0 9 X:6234525-6234558 6 6 2935 FBgn0262730 931.1666667 14.78666667 22.41333333 0.00644353 0.405770965 0.267697799 8 -7 0.5 0.25 dme-miR-92b-3p 6mer3-8 GTGCAA X 6240861 6240866 - X_6240861_6240866_- 0.733806669 0.929704201 0.831755435 0.138520451 Rbcn-3A FBtr0303341 6240743 6241463 X - 6240836 6240885 3'utr Rbcn-3A FlyBase G65066.1 TGTCTTTATGTTGAGCTTTGTGCAAAAATTTGTCTGTTGTTGAATCAATC 18 6240868 0.984502225 5 18 152 1 1.361727836 0.260869565 0.277777778 0.434782609 18 0 0 23 X:6240836-6240885 6 Rbcn-3A FBtr0303341 6240743 6241463 GTGCAA 6mer3-8 dme-miR-92b-3p X - 6240812 6240885 3'utr Rbcn-3A FlyBase G49033.1 TGTCTTTATGTTGAGCTTTGTGCAAAAATTTGTCTGTTGTTGAATCAATCAAGATATATGTATACCTAAAACGA 23 6240868 0.986006175 9 22 188 1 1.531478917 0.205882353 0.434782609 0.617647059 23 0 0 34 X:6240812-6240885 6 19 2936 FBgn0023458 2065.706667 22.39 34.44 0.009197821 0.848593122 0.551684088 2 2 2 0.25 dme-miR-308-3p 8mer-m1 CTGTGATT X 633704 633711 - X_633704_633711_- 0.367171587 0.367866237 0.367518912 0.000491156 Dredd FBtr0114561 633620 634524 X - 633651 633731 stop_codon Dredd FlyBase G63872.1 ACGTGTACTTTCCACCTCGTCTGTGATTTTGGTTTTTAACGTTAGCGCAGTTGTACGTCCACTCAAATTGCTCTATAAAGG 32 633704 0.991231728 6 28 296 0.9 1.556302501 0.075 0.21875 0.375 32 4 0 36 X:633651-633731 8 Dredd FBtr0114561 633620 634524 CTGTGATT 8mer-m1 dme-miR-308-3p X - 633657 633747 stop_codon Dredd FlyBase G48146.1 AGCACATTTCGCCAGCACGTGTACTTTCCACCTCGTCTGTGATTTTGGTTTTTAACGTTAGCGCAGTTGTACGTCCACTCAAATTGCTCTA 27 633704 0.991268941 10 25 269 0.906976744 1.591064607 0.023255814 0.407407407 0.627906977 27 4 0 39 X:633657-633747 8 23.5 2937 FBgn0020381 93.66666667 6.923333333 10.50666667 0.25088968 3.394318729 2.236675127 -7 -7 -7 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 6371106 6371111 - X_6371106_6371111_- 0.949359583 0.957497269 0.953428426 0.005754223 PpV FBtr0070921|FBtr0070921|FBtr0070921|FBtr0331430|FBtr0331430|FBtr0331430|FBtr0331431|FBtr0331431|FBtr0331431|FBtr0331432|FBtr0331432|FBtr0331432 6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063 6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728 X - 6371096 6371127 3'utr PpV FlyBase G65179.1 AAGAATAACCCAATTGTGTGATCCCGATCAAA 12 6371114 0.78320391 2 12 66 1 1.079181246 0.25 0 0 12 0 0 12 X:6371096-6371127 6 PpV FBtr0331431|FBtr0331431|FBtr0331431|FBtr0331432|FBtr0331432|FBtr0331432|FBtr0070921|FBtr0070921|FBtr0070921|FBtr0331430|FBtr0331430|FBtr0331430 6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063|6371063 6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728|6371728 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 6371085 6371125 3'utr PpV FlyBase G49105.1 GAATAACCCAATTGTGTGATCCCGATCAAAACGATATGATT 10 6371113 0.967605388 3 10 54 1 1.041392685 0.181818182 0.1 0.181818182 10 0 0 11 X:6371085-6371125 6 11 2938 FBgn0003139 501.9866667 38.39333333 58.97333333 0.021912933 0.286508074 0.186524983 3 2 2.5 0.25 dme-miR-79-3p 8mer-A1 TAGCTTTA X 649248 649255 - X_649248_649255_- 0.525520743 0.53238036 0.528950551 0.00485054 Hmt4-20 FBtr0070151|FBtr0308652 648481|648889 650049|650049 X - 649224 649267 5'utr Hmt4-20 FlyBase G63878.1 CGAAACCCAACTTAGCTTTACACCAAGCAAGCCCCTCTGTTTGT 14 649256 0.954141693 2 12 55 0.888888889 1.204119983 0.166666667 0.214285714 0.388888889 14 2 0 16 X:649224-649267 8 Hmt4-20 FBtr0308652|FBtr0070151 648889|648481 650049|650049 TAGCTTTA 8mer-A1 dme-miR-79-3p X - 649206 649281 5'utr Hmt4-20 FlyBase G48150.1 AGACGCCTTGCATCCGAAACCCAACTTAGCTTTACACCAAGCAAGCCCCTCTGTTTGTTGCAAGATAATGAAACAA 8 649256 0.981180479 3 6 44 0.818181818 0.653212514 0.181818182 0.375 0.545454545 8 1 1 9 X:649206-649281 8 8.5 2939 FBgn0025639 495.87 9.743333333 14.96 0.01714159 0.872391379 0.568181818 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 649666 649671 - X_649666_649671_- 0.848979836 0.89558501 0.872282423 0.032954853 Hmt4-20 FBtr0070151|FBtr0070151|FBtr0070151|FBtr0308652|FBtr0308652|FBtr0308652 648481|648481|648481|648889|648889|648889 650049|650049|650049|650049|650049|650049 X - 649646 649688 5'utr Hmt4-20 FlyBase G63879.1 ATTTCTCTCTTTCTCTTTGTGATCACTTCCCGTTTCTCCCAAC 29 649672 0.728207661 4 25 348 0.909090909 1.176091259 0 0.137931034 0.242424242 29 2 1 30 X:649646-649688 6 Hmt4-20 FBtr0308652|FBtr0308652|FBtr0308652|FBtr0070151|FBtr0070151|FBtr0070151 648889|648889|648889|648481|648481|648481 650049|650049|650049|650049|650049|650049 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 649647 649683 5'utr Hmt4-20 FlyBase G48151.1 TCTCTTTCTCTTTGTGATCACTTCCCGTTTCTCCCAA 8 649672 0.671721366 4 6 95 0.8 0.903089987 0 0.125 0.3 8 2 0 8 X:649647-649683 6 17 2940 FBgn0025639 495.87 9.743333333 14.96 0.034283179 1.744782757 1.136363636 1 1 1 0.25 dme-miR-2a-2-5p 6mer2-7 GATGAG X 6530957 6530962 - X_6530957_6530962_- 0.634455779 0.998409894 0.816432837 0.257354412 RpL7A FBtr0343329 6530895 6531125 X - 6530933 6530985 3'utr RpL7A FlyBase G65191.1 AAGTGCCTGTGAGAGTGCTTTTGGATGAGTCGATGATTTGGCGTCGGCTTGGA 8 6530966 0.987310221 5 7 56 0.888888889 0.903089987 0.222222222 0.125 0.222222222 8 1 0 8 X:6530933-6530985 6 RpL7A FBtr0343329 6530895 6531125 GATGAG 6mer2-7 dme-miR-2a-2-5p X - 6530924 6530985 3'utr RpL7A FlyBase G49115.1 AAGTGCCTGTGAGAGTGCTTTTGGATGAGTCGATGATTTGGCGTCGGCTTGGATTCAATAAA 11 6530965 0.657050249 8 11 83 1 1.176091259 0.2 0.363636364 0.533333333 11 0 0 15 X:6530924-6530985 6 7.5 2941 FBgn0014026 13933.55333 1778.546667 2702.97 0.000538269 0.004216926 0.002774726 4 3 3.5 0.25 dme-miR-7-5p 7mer-A1 TCTTCCA X 6537461 6537467 + X_6537461_6537467_+ 0.817220547 0.822704794 0.81996267 0.003877986 dx FBtr0070914 6537377 6538575 X + 6537437 6537546 3'utr dx FlyBase G59218.1 CCACCGAAGTCCCCTCGATCATTCTCTTCCATTCGTCGTTAAGTTACTTTCTACATAATCTCAGTGTGTGTGCAATCCTCGTTTACTATGATATATTTTTTTTATAGATA 147 6537458 0.79244303 21 133 1425 0.901734104 1.716003344 0.248554913 0.136054422 0.265895954 147 15 2 156 X:6537437-6537546 7 dx FBtr0070914 6537377 6538575 TCTTCCA 7mer-A1 dme-miR-7-5p X + 6537441 6537534 3'utr dx FlyBase G44802.1 CGAAGTCCCCTCGATCATTCTCTTCCATTCGTCGTTAAGTTACTTTCTACATAATCTCAGTGTGTGTGCAATCCTCGTTTACTATGATATATTT 52 6537458 0.765246965 11 44 499 0.864864865 1.204119983 0.135135135 0.307692308 0.513513514 52 7 3 64 X:6537441-6537534 7 43.5 2942 FBgn0000524 299.9366667 9.43 14.42 0.145030618 4.612937434 3.016643551 3 3 3 0.25 dme-miR-79-3p 6mer3-8 TAGCTT X 6537608 6537613 + X_6537608_6537613_+ 0.693766328 0.863497091 0.778631709 0.1200178 dx FBtr0070914 6537377 6538575 X + 6537583 6537635 3'utr dx FlyBase G59219.1 CAACAGCAAACCACAATTGCAATTGTAGCTTCCTTTCCGCTCTTCCAATTCGT 22 6537601 0.983738085 9 22 171 1 1.447158031 0 0.272727273 0.428571429 22 0 0 28 X:6537583-6537635 6 dx FBtr0070914 6537377 6538575 TAGCTT 6mer3-8 dme-miR-79-3p X + 6537588 6537641 3'utr dx FlyBase G44804.1 GCAAACCACAATTGCAATTGTAGCTTCCTTTCCGCTCTTCCAATTCGTATTTGT 12 6537616 0.942894823 9 11 97 0.95 1.278753601 0 0.583333333 0.75 12 1 0 19 X:6537588-6537641 6 14.5 2943 FBgn0000524 299.9366667 9.43 14.42 0.048343539 1.537645811 1.00554785 7 -8 -0.5 0.25 dme-miR-308-3p 7mer-m1 TGTGATT X 6538076 6538082 + X_6538076_6538082_+ 0.420652976 0.443097664 0.43187532 0.0158708 dx FBtr0070914 6537377 6538575 X + 6537954 6538098 3'utr dx FlyBase G59222.1 CTTTATATCGGATTTATATAGGATTAAAATAGTATTTTGAGAGAGGAAATGGAGATGGGTAAATTCGATAGACTTGTCTCACTTGTCTTGGCCATTTAATCTCTTTCATTCAGCGAATTTGATGTGATTTTAATTTGAATTATTC 231 6538072 0.988029273 25 226 2057 0.985663082 2.138302698 0.064516129 0.16017316 0.304659498 231 3 1 275 X:6537954-6538098 7 dx FBtr0070914 6537377 6538575 TGTGATT 7mer-m1 dme-miR-308-3p X + 6538001 6538149 3'utr dx FlyBase G44807.2 AATGGAGATGGGTAAATTCGATAGACTTGTCTCACTTGTCTTGGCCATTTAATCTCTTTCATTCAGCGAATTTGATGTGATTTTAATTTGAATTATTCATTATTAAACGGAGCATTTAGGAAGCATAGTTGTAACGCAGCCAGATATTC 145 6538072 0.989176125 20 138 1336 0.958715596 2.320146286 0.02293578 0.344827586 0.564220183 145 9 0 209 X:6538001-6538149 7 96 2944 FBgn0000524 299.9366667 9.43 14.42 0.32006757 10.18027572 6.65742025 4 4 4 0.25 dme-bantam-3p 6mer3-8 TGATCT X 657757 657762 + X_657757_657762_+ 0.583342389 0.60870305 0.596022719 0.017932652 SkpA FBtr0345314|FBtr0070128|FBtr0100530|FBtr0070123|FBtr0070126|FBtr0070124|FBtr0070129|FBtr0070125|FBtr0070127 657597|657597|657597|657597|657597|657597|657597|657597|657597 657899|657899|657899|657899|657899|657899|657899|657899|657899 X + 657709 657782 3'utr SkpA FlyBase G57834.1 TTTTTTATTTTTAACCCCAGCAGAGACTCGATTTAAATTGTGTATAAATGATCTGTTGCTGATTTGATTCGCGG 24 657746 0.881938661 8 23 225 0.923076923 0.903089987 0.307692308 0.083333333 0.153846154 24 0 2 24 X:657709-657782 6 SkpA FBtr0070126|FBtr0070129|FBtr0070124|FBtr0070125|FBtr0070127|FBtr0345314|FBtr0070128|FBtr0100530|FBtr0070123 657597|657597|657597|657597|657597|657597|657597|657597|657597 657899|657899|657899|657899|657899|657899|657899|657899|657899 TGATCT 6mer3-8 dme-bantam-3p X + 657719 657785 3'utr SkpA FlyBase G43752.1 TTAACCCCAGCAGAGACTCGATTTAAATTGTGTATAAATGATCTGTTGCTGATTTGATTCGCGGGGT 21 657746 0.986149737 8 20 170 0.967741935 1.477121255 0.225806452 0.285714286 0.516129032 21 1 0 30 X:657719-657785 6 17 2945 FBgn0025637 1511.546667 228.32 348.46 0.011246758 0.074456903 0.048786087 11 11 11 0.25 dme-miR-932-5p 7mer-m8 GGAATTG X 6650575 6650581 + X_6650575_6650581_+ 0.658047276 0.672507973 0.665277624 0.010225259 pigs FBtr0308653|FBtr0343375|FBtr0070948 6650412|6650412|6650412 6653015|6653015|6652098 X + 6650536 6650611 3'utr pigs FlyBase G59272.1 GTGGGTAGTGAATAGTTAAGATAGGATTAGAGCCAAGCTGGAATTGTCTGCTGCTGCTACGGCGTGTGTGTGTGCG 128 6650574 0.936510671 16 99 899 0.787671233 1.583576586 0.226027397 0.1328125 0.239726027 128 29 2 115 X:6650536-6650611 7 pigs FBtr0308653|FBtr0343375|FBtr0070948 6650412|6650412|6650412 6653015|6653015|6652098 GGAATTG 7mer-m8 dme-miR-932-5p X + 6650534 6650600 3'utr pigs FlyBase G44847.1 TTGTGGGTAGTGAATAGTTAAGATAGGATTAGAGCCAAGCTGGAATTGTCTGCTGCTGCTACGGCGT 87 6650574 0.937648929 15 67 573 0.774193548 1.681241237 0.25 0.287356322 0.5 87 27 1 96 X:6650534-6650600 7 58 2946 FBgn0029881 6856.753333 130.81 200.9766667 0.008458814 0.443391178 0.288590715 1 1 1 0.25 dme-miR-8-3p 6mer3-8 CAGTAT X 6651675 6651680 + X_6651675_6651680_+ 0.747100115 0.757163831 0.752131973 0.007116111 pigs FBtr0308653|FBtr0343375|FBtr0070948 6650412|6650412|6650412 6653015|6653015|6652098 X + 6651485 6651697 3'utr pigs FlyBase G59274.1 TACGATCGCAAACACATAGAGGACGCATACCTAGTTTTCTAGAAATTTTTAAAGTAAAGCCAACAAAATTCTTCAGATTCGATTTGTAGCGATGCAGAGAATACGTTTATTTTTGTACGCTTGAACAGAGGAACCGGCGGAGATCGTGGGATCTGGAAAGATGAATAGCTTTTAGACAACTCGACTTTTACAGTATAGCTCTATATATATATG 77 6651672 0.983949203 19 74 571 0.97 1.685741739 0.09 0.220779221 0.4 77 2 1 97 X:6651485-6651697 6 pigs FBtr0308653|FBtr0343375|FBtr0070948 6650412|6650412|6650412 6653015|6653015|6652098 CAGTAT 6mer3-8 dme-miR-8-3p X + 6651598 6651701 3'utr pigs FlyBase G44848.1 TGTACGCTTGAACAGAGGAACCGGCGGAGATCGTGGGATCTGGAAAGATGAATAGCTTTTAGACAACTCGACTTTTACAGTATAGCTCTATATATATATGTATA 43 6651672 0.980874827 12 42 303 0.933333333 1.748188027 0.183333333 0.279069767 0.483333333 43 4 0 56 X:6651598-6651701 6 38.5 2947 FBgn0029881 6856.753333 130.81 200.9766667 0.005614902 0.294320006 0.191564527 3 3 3 0.25 dme-miR-2a-2-5p 7mer-m8 TGATGAG X 6652804 6652810 + X_6652804_6652810_+ 0.606261625 0.656078909 0.631170267 0.035226151 pigs FBtr0308653|FBtr0343375 6650412|6650412 6653015|6653015 X + 6652705 6652813 3'utr pigs FlyBase G59281.1 AGAAAATTAAGCAATTGCCCGATTTGCATGCCAAAAGGTTGATAAGAAATCGAGCAAAAAACAAGATGAAGTGCACCACGGGTTCTCGAGCGCTGGCCATGATGAGCAT 15 6652799 0.969187036 7 12 60 0.8125 1.113943352 0.3125 0.066666667 0.125 15 3 0 13 X:6652705-6652813 7 pigs FBtr0308653|FBtr0343375 6650412|6650412 6653015|6653015 TGATGAG 7mer-m8 dme-miR-2a-2-5p X + 6652767 6652812 3'utr pigs FlyBase G44855.1 AAGATGAAGTGCACCACGGGTTCTCGAGCGCTGGCCATGATGAGCA 7 6652806 0.760593471 5 6 23 0.941176471 1.204119983 0.176470588 0.714285714 0.882352941 7 1 0 16 X:6652767-6652812 7 5 2948 FBgn0029881 6856.753333 130.81 200.9766667 0.000729208 0.038223377 0.02487851 5 -2 1.5 0.25 dme-miR-318-3p 6mer3-8 CCCAGT X 6659215 6659220 + X_6659215_6659220_+ 0.993541844 0.77448393 0.884012887 0.154897327 l(1)G0148 FBtr0343377|FBtr0070950 6659154|6659154 6659709|6659709 X + 6659180 6659242 3'utr l(1)G0148 FlyBase G59291.1 ACATACACCACTTGTACATACATACATATACTATACCCAGTTCGCTGATCATGATTGTACATA 9 6659226 0.985920225 6 9 71 1 1 0.1 0.111111111 0.2 9 0 0 10 X:6659180-6659242 6 l(1)G0148 FBtr0070950|FBtr0343377 6659154|6659154 6659709|6659709 CCCAGT 6mer3-8 dme-miR-318-3p X + 6659182 6659237 3'utr l(1)G0148 FlyBase G44861.1 ATACACCACTTGTACATACATACATATACTATACCCAGTTCGCTGATCATGATTGT 7 6659234 0.984238198 5 7 55 1 1 0.7 0.285714286 0.5 7 0 0 10 X:6659182-6659237 6 6.5 2949 FBgn0028360 627.0766667 25.24 38.74333333 0.010365559 0.257527734 0.167770799 -11 -19 -15 0.25 dme-miR-33-5p 6mer3-8 CAATGC X 6659304 6659309 + X_6659304_6659309_+ 0.926069557 0.627562235 0.776815896 0.211076607 l(1)G0148 FBtr0343377|FBtr0070950 6659154|6659154 6659709|6659709 X + 6659262 6659348 3'utr l(1)G0148 FlyBase G59292.1 AGCATATCTCATTATTGCACCCAGAGCCAGAAGAAACTCGTCCAATGCCCCACTAGGCCACATTTACTTACCTCAAGCCGCAGGCAG 26 6659307 0.949235065 6 23 102 0.875 1.447158031 0.09375 0.192307692 0.34375 26 4 0 28 X:6659262-6659348 6 l(1)G0148 FBtr0070950|FBtr0343377 6659154|6659154 6659709|6659709 CAATGC 6mer3-8 dme-miR-33-5p X + 6659259 6659347 3'utr l(1)G0148 FlyBase G44862.1 AAGAGCATATCTCATTATTGCACCCAGAGCCAGAAGAAACTCGTCCAATGCCCCACTAGGCCACATTTACTTACCTCAAGCCGCAGGCA 12 6659307 0.954349558 5 11 52 0.944444444 1.230448921 0.111111111 0.333333333 0.555555556 12 1 0 17 X:6659259-6659347 6 14 2950 FBgn0028360 627.0766667 25.24 38.74333333 0.022325819 0.554675119 0.361352491 -3 -3 -3 0.25 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA X 6667159 6667166 + X_6667159_6667166_+ 0.393632873 0.377134213 0.385383543 0.011666343 Ctr1A FBtr0070951|FBtr0308593|FBtr0308592|FBtr0308594 6667050|6667050|6667050|6667050 6668258|6667628|6667628|6667628 X + 6667112 6667188 3'utr Ctr1A FlyBase G59297.1 GAGGCGTTGGAGGAGCAAATGTCCATCTGAATGAAAGGCAGAGGCATTGGTGCTAAGCTGGGAATCCCAGGAAGCTC 252 6667158 0.949332518 4 249 1079 0.992831541 2.141449773 0.35483871 0.083333333 0.172043011 252 1 1 277 X:6667112-6667188 8 Ctr1A FBtr0308594|FBtr0308592|FBtr0308593|FBtr0070951 6667050|6667050|6667050|6667050 6667628|6667628|6667628|6668258 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" X + 6667138 6667189 3'utr Ctr1A FlyBase G44866.1 CTGAATGAAAGGCAGAGGCATTGGTGCTAAGCTGGGAATCCCAGGAAGCTCT 133 6667158 0.884878544 3 131 561 0.985148515 1.997823081 0.292079208 0.37593985 0.589108911 133 2 1 199 X:6667138-6667189 8 190 2951 FBgn0062413 431.6666667 29.72666667 45.48333333 0.44015444 6.391567616 4.177354342 1 1 1 0.25 dme-miR-11-3p 7mer-m1 TGTGATG X 6669798 6669804 - X_6669798_6669804_- 0.606388198 0.606918131 0.606653164 0.000374696 CG3198 FBtr0070991 6668537 6671982 X - 6669789 6669918 3'utr CG3198 FlyBase G65217.2 ATGTATGTTCATGTTCCCCCCTCCTCTTCACCAACAGGTAAATTGCGACTGAACCCGACCCCATAAAAATTATGATACTGATATTTGATATCGATCTCGATTAAATCGAATTTTTGTGATGTGACGAGAT 54 6669805 0.971146207 19 49 371 0.933333333 1.146128036 0.15 0.111111111 0.2 54 1 3 56 X:6669789-6669918 7 CG3198 FBtr0070991 6668537 6671982 TGTGATG 7mer-m1 dme-miR-11-3p X - 6669789 6669914 3'utr CG3198 FlyBase G49132.1 ATGTTCATGTTCCCCCCTCCTCTTCACCAACAGGTAAATTGCGACTGAACCCGACCCCATAAAAATTATGATACTGATATTTGATATCGATCTCGATTAAATCGAATTTTTGTGATGTGACGAGAT 33 6669806 0.80084011 14 32 231 0.941176471 1.079181246 0.176470588 0.393939394 0.607843137 33 0 3 48 X:6669789-6669914 7 19.5 2952 FBgn0029887 782.61 18.86666667 28.88333333 0.024916625 1.033568905 0.675129833 1 2 1.5 0.25 dme-miR-980-3p 7mer-A1 GCAGCTA X 6689439 6689445 - X_6689439_6689445_- 0.48128691 0.499073086 0.490179998 0.012576743 CG14442 FBtr0070988|FBtr0339493|FBtr0300772|FBtr0339491 6689294|6689318|6689318|6689318 6689803|6689803|6689803|6689803 X - 6689341 6689497 3'utr CG14442 FlyBase G65234.1 AAATGAAATGAAACACTGTGACGCCCCGAAAGCCACTGAAAATCGAAGAAATGCAGCTAAAATAAAAAGATAACTACGATCGATGGTGGAGATCCAACTAAACCTAATCCAGAATATGTAGCGCGTAAACAGAGCACTAAGTAGTTGTATGTATTAA 95 6689446 0.956170855 14 93 311 0.983193277 1.591064607 0.201680672 0.189473684 0.352941176 95 0 2 117 X:6689341-6689497 7 CG14442 FBtr0339491|FBtr0300772|FBtr0339493|FBtr0070988 6689318|6689318|6689318|6689294 6689803|6689803|6689803|6689803 GCAGCTA 7mer-A1 dme-miR-980-3p X - 6689390 6689484 3'utr CG14442 FlyBase G49142.1 CACTGTGACGCCCCGAAAGCCACTGAAAATCGAAGAAATGCAGCTAAAATAAAAAGATAACTACGATCGATGGTGGAGATCCAACTAAACCTAAT 62 6689446 0.957393786 8 62 187 1 1.886490725 0.168831169 0.209677419 0.363636364 62 0 0 77 X:6689390-6689484 7 50 2953 FBgn0029893 971.2033333 28.72 44.23333333 0.051482525 1.740947075 1.130369254 1 1 1 0.25 dme-miR-980-3p 6mer3-8 GGCAGC X 6697074 6697079 - X_6697074_6697079_- 0.833706965 0.849449514 0.841578239 0.011131629 CG14440 FBtr0070987|FBtr0310419 6695864|6696764 6697328|6697328 X - 6697041 6697099 3'utr CG14440 FlyBase G65249.1 TGAGGACTTGCAAATGAATGGGCAGCAGGCACTCTAGGATTAAAGCCAGGCAATTTTTT 24 6697081 0.959687632 6 21 102 0.866666667 1.113943352 0.233333333 0.25 0.4 24 3 1 26 X:6697041-6697099 6 CG14440 FBtr0310419|FBtr0070987 6696764|6695864 6697328|6697328 GGCAGC 6mer3-8 dme-miR-980-3p X - 6697054 6697099 3'utr CG14440 FlyBase G49152.1 TGAGGACTTGCAAATGAATGGGCAGCAGGCACTCTAGGATTAAAGC 10 6697082 0.868282228 2 10 36 1 1.113943352 0.307692308 0.2 0.384615385 10 0 0 13 X:6697054-6697099 6 15 2954 FBgn0029894 265.63 13.82333333 21.15 0.056469525 1.085121775 0.709219858 2 3 2.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC X 6721473 6721478 - X_6721473_6721478_- 0.805454836 0.880830354 0.843142595 0.053298598 CG3168 FBtr0340265|FBtr0070984|FBtr0340267|FBtr0340266|FBtr0070986|FBtr0070985|FBtr0340268 6720473|6720473|6720473|6720473|6720473|6720473|6720002 6721551|6721551|6721551|6721551|6721551|6721551|6721551 X - 6721452 6721502 3'utr CG3168 FlyBase G65255.1 CCATAGAATCTTCTGCTTTAACTGCTAGTCTGCAAGGTCTTGTTTCGAGTC 11 6721488 0.742662216 5 9 95 0.8125 1.113943352 0.125 0.454545455 0.625 11 3 0 13 X:6721452-6721502 6 CG3168 FBtr0070985|FBtr0340268|FBtr0340266|FBtr0070986|FBtr0340267|FBtr0340265|FBtr0070984 6720473|6720002|6720473|6720473|6720473|6720473|6720473 6721551|6721551|6721551|6721551|6721551|6721551|6721551 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" X - 6721441 6721488 3'utr CG3168 FlyBase G49156.1 GCTTTAACTGCTAGTCTGCAAGGTCTTGTTTCGAGTCATGATACTATG 6 6721472 0.985759735 3 4 41 1 0.954242509 0.666666667 0.5 0.666666667 6 0 0 9 X:6721441-6721488 6 6 2955 FBgn0029896 793.0366667 27.79 42.01333333 0.007565854 0.215905002 0.142811806 10 -6 2 0.25 dme-miR-304-5p 6mer3-8 TGAGAT X 6781828 6781833 - X_6781828_6781833_- 0.535868873 0.540237381 0.538053127 0.003088996 C3G FBtr0300526|FBtr0334967|FBtr0299794|FBtr0299793|FBtr0334968|FBtr0340087|FBtr0299791|FBtr0299795|FBtr0299792|FBtr0334969 6781414|6781414|6781414|6781414|6781414|6780788|6780788|6781414|6781414|6781414 6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353 X - 6781806 6781858 3'utr C3G FlyBase G65276.1 AAATCAGCAATTTTCGCTTTTGTTTTGAGATCTCTTTTTTACACAAGAACACA 26 6781824 0.979570102 9 24 340 0.931034483 1.431363764 0.413793103 0.115384615 0.206896552 26 2 0 27 X:6781806-6781858 6 C3G FBtr0299792|FBtr0334969|FBtr0299791|FBtr0299795|FBtr0334968|FBtr0340087|FBtr0300526|FBtr0334967|FBtr0299794|FBtr0299793 6781414|6781414|6780788|6781414|6781414|6780788|6781414|6781414|6781414|6781414 6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353 TGAGAT 6mer3-8 dme-miR-304-5p X - 6781815 6781847 3'utr C3G FlyBase G49172.1 TTTCGCTTTTGTTTTGAGATCTCTTTTTTACAC 22 6781823 0.624662568 9 21 307 0.972222222 1.544068044 0.583333333 0.409090909 0.638888889 22 1 0 35 X:6781815-6781847 6 22 2956 FBgn0259228 1638.55 32.65333333 50.12 0.013426505 0.673744385 0.438946528 -9 -10 -9.5 0.25 dme-miR-190-5p 6mer3-8 ACATAT X 6812161 6812166 + X_6812161_6812166_+ 0.999998748 0.999629088 0.999813918 0.000261347 pod1 FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228|FBtr0112956|FBtr0070964|FBtr0070966 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813830|6813830|6813830|6813830|6813520|6813830|6813830 X + 6812103 6812165 3'utr pod1 FlyBase G59407.1 TCAGTTTATGTGGCCATATAGGAAAAGTGAGGAGAAGGACTTAGATGATACTGCTTTTACATA 8 6812159 0.93192631 7 7 60 0.888888889 0.903089987 0 0.125 0.222222222 8 1 0 8 X:6812103-6812165 5 pod1 FBtr0112956|FBtr0070964|FBtr0070966|FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813520|6813830|6813830|6813830|6813830|6813830|6813830 ACATAT 6mer3-8 dme-miR-190-5p X + 6812107 6812191 3'utr pod1 FlyBase G44936.1 TTTATGTGGCCATATAGGAAAAGTGAGGAGAAGGACTTAGATGATACTGCTTTTACATATACGCAAAATGTATTTCCCTCTCTGT 8 6812144 0.984837052 8 8 65 1 1.041392685 0 0.375 0.545454545 8 0 0 11 X:6812107-6812191 6 2.5 2957 FBgn0029903 1544.65 31.03666667 47.70666667 0.00161849 0.080549887 0.052403577 2 17 9.5 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 6812373 6812379 + X_6812373_6812379_+ 0.661611249 0.661604835 0.661608042 4.53E-06 pod1 FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228|FBtr0112956|FBtr0070964|FBtr0070966 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813830|6813830|6813830|6813830|6813520|6813830|6813830 X + 6812358 6812404 3'utr pod1 FlyBase G59409.2 ACCCCCACCATTGTTTCTAGTCTTTCGCATCGTTCGATCCCCCAAAT 90 6812380 0.790910513 10 61 825 0.673267327 1.230448921 0.108910891 0.122222222 0.217821782 90 30 3 68 X:6812358-6812404 7 pod1 FBtr0112956|FBtr0070964|FBtr0070966|FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813520|6813830|6813830|6813830|6813830|6813830|6813830 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X + 6812359 6812403 3'utr pod1 FlyBase G44937.2 CCCCCACCATTGTTTCTAGTCTTTCGCATCGTTCGATCCCCCAAA 91 6812380 0.630473063 8 45 765 0.510948905 0.942008053 0.03649635 0.395604396 0.598540146 91 60 7 70 X:6812359-6812403 7 82.5 2958 FBgn0029903 1544.65 31.03666667 47.70666667 0.053410158 2.658146279 1.729318055 -7 -7 -7 0.25 dme-miR-14-3p 6mer2-7 AGACTG X 6812467 6812472 + X_6812467_6812472_+ 0.998425167 0.999810113 0.99911764 0.000979272 pod1 FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228|FBtr0112956|FBtr0070964|FBtr0070966 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813830|6813830|6813830|6813830|6813520|6813830|6813830 X + 6812446 6812488 3'utr pod1 FlyBase G59410.1 AGACAGGAAACAAAAACATATAGACTGTAGCCAAACGAAAAAT 99 6812466 0.900310695 3 98 295 0.991869919 1.785329835 0.097560976 0.222222222 0.37398374 99 0 1 122 X:6812446-6812488 6 pod1 FBtr0112956|FBtr0070964|FBtr0070966|FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813520|6813830|6813830|6813830|6813830|6813830|6813830 AGACTG 6mer2-7 dme-miR-14-3p X + 6812450 6812488 3'utr pod1 FlyBase G44938.1 AGGAAACAAAAACATATAGACTGTAGCCAAACGAAAAAT 71 6812466 0.889506262 3 69 215 0.979166667 1.496006599 0.104166667 0.253521127 0.447916667 71 0 2 94 X:6812450-6812488 6 84.5 2959 FBgn0029903 1544.65 31.03666667 47.70666667 0.054704949 2.722586188 1.771240917 1 1 1 0.25 dme-bantam-3p 6mer2-7 GATCTC X 6813304 6813309 + X_6813304_6813309_+ 0.94722934 0.837094894 0.892162117 0.077876781 pod1 FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228|FBtr0112956|FBtr0070964|FBtr0070966 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813830|6813830|6813830|6813830|6813520|6813830|6813830 X + 6813190 6813325 3'utr pod1 FlyBase G59413.1 AAACGCCATGGAACGACTGACAGACAAGTATTCGCTAAACATTCTGATCCAAATCTGCCCGGCCCGTCAAAAAGTGTTCCACAGCACGAGTAGAATTGATCTGGGATCGATTGGGATCTCGGGATCGGGGTAGCGG 30 6813286 0.870300535 12 26 139 0.861111111 1.014240439 0.277777778 0.2 0.333333333 30 3 2 31 X:6813190-6813325 6 pod1 FBtr0112956|FBtr0070964|FBtr0070966|FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813520|6813830|6813830|6813830|6813830|6813830|6813830 GATCTC 6mer2-7 dme-bantam-3p X + 6813272 6813319 3'utr pod1 FlyBase G44942.1 AGCACGAGTAGAATTGATCTGGGATCGATTGGGATCTCGGGATCGGGG 7 6813300 0.977940622 4 6 43 0.8 0.903089987 0.7 0.428571429 0.6 7 2 0 8 X:6813272-6813319 6 6.5 2960 FBgn0029903 1544.65 31.03666667 47.70666667 0.004208073 0.209429707 0.136249301 18 4 11 0.25 dme-miR-970-3p 6mer3-8 TCTTAT X 6813451 6813456 + X_6813451_6813456_+ 0.701009766 0.753662327 0.727336047 0.03723094 pod1 FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228|FBtr0112956|FBtr0070964|FBtr0070966 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813830|6813830|6813830|6813830|6813520|6813830|6813830 X + 6813432 6813472 3'utr pod1 FlyBase G59414.1 ATTACGATTTTCGAACGTCTCTTATTTATATTTATATATAT 20 6813453 0.739894318 4 19 217 0.96 1.380211242 0 0.2 0.36 20 1 0 24 X:6813432-6813472 6 pod1 FBtr0112956|FBtr0070964|FBtr0070966|FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813520|6813830|6813830|6813830|6813830|6813830|6813830 TCTTAT 6mer3-8 dme-miR-970-3p X + 6813404 6813470 3'utr pod1 FlyBase G44943.1 GTCATTCTGTATTTATTAGCCATATTCGATTACGATTTTCGAACGTCTCTTATTTATATTTATATAT 18 6813453 0.990403806 6 18 189 1 1.447158031 0.035714286 0.444444444 0.642857143 18 0 0 28 X:6813404-6813470 6 16.5 2961 FBgn0029903 1544.65 31.03666667 47.70666667 0.010682032 0.531629256 0.345863611 -2 -2 -2 0.25 dme-miR-11-3p 7mer-m1 TGTGATG X 6839650 6839656 - X_6839650_6839656_- 0.471152803 0.507098179 0.489125491 0.025417236 CG14435 FBtr0071042|FBtr0343323 6839430|6838172 6840376|6840376 X - 6839636 6839683 3'utr CG14435 FlyBase G65305.1 ACCAACCAACAAAAGAATGTCAACCAATGTGATGTTAAATTTTATATT 58 6839649 0.986446574 7 53 460 0.929577465 1.51851394 0.112676056 0.206896552 0.352112676 58 4 1 66 X:6839636-6839683 7 CG14435 FBtr0343323|FBtr0071042 6838172|6839430 6840376|6840376 TGTGATG 7mer-m1 dme-miR-11-3p X - 6839635 6839682 3'utr CG14435 FlyBase G49188.2 CCAACCAACAAAAGAATGTCAACCAATGTGATGTTAAATTTTATATTT 45 6839649 0.987678926 9 39 361 0.880597015 1.469822016 0.23880597 0.355555556 0.567164179 45 7 1 59 X:6839635-6839682 7 48.5 2962 FBgn0029911 561.5333333 25.08 38.61666667 0.086370652 1.933811802 1.255934398 -7 -7 -7 0.25 dme-miR-277-3p 8mer-A1 TGCATTTA X 6851746 6851753 + X_6851746_6851753_+ 0.623660227 0.596190674 0.60992545 0.01942387 CG4558 FBtr0070995|FBtr0300177 6851128|6851390 6851884|6851884 X + 6851685 6851839 3'utr CG4558 FlyBase G59445.1 CAGTTAACAGTTAGCTCCTGGCAGCCGCGCTTCATCCTTGTGTTCGTCGTTCTAACCATTTTGCATTTAAAACTCTCGACTCTACGTTCTGTTCACACCAACTAGCGTAGCCAACGGAAAGCGATTTTGTAAATATCCATTGCCAGACTTGAGTT 94 6851745 0.986301179 14 91 781 0.981481481 2.025305865 0.064814815 0.138297872 0.25 94 2 0 106 X:6851685-6851839 8 CG4558 FBtr0070995|FBtr0300177 6851128|6851390 6851884|6851884 TGCATTTA 8mer-A1 dme-miR-277-3p X + 6851688 6851814 3'utr CG4558 FlyBase G44966.1 TTAACAGTTAGCTCCTGGCAGCCGCGCTTCATCCTTGTGTTCGTCGTTCTAACCATTTTGCATTTAAAACTCTCGACTCTACGTTCTGTTCACACCAACTAGCGTAGCCAACGGAAAGCGATTTTGT 39 6851722 0.987748038 8 37 331 0.943396226 1.22184875 0.169811321 0.230769231 0.433962264 39 1 2 50 X:6851688-6851814 8 26 2963 FBgn0029914 220.6666667 13.97333333 21.30666667 0.117824773 1.860687023 1.220275344 1 24 12.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 6851938 6851943 - X_6851938_6851943_- 0.754199924 0.755046122 0.754623023 0.000598354 CG14434 FBtr0345899|FBtr0345899|FBtr0345899|FBtr0343322|FBtr0343322|FBtr0343322|FBtr0071040|FBtr0071040|FBtr0071040 6851907|6851907|6851907|6851907|6851907|6851907|6851907|6851907|6851907 6852045|6852045|6852045|6852045|6852045|6852045|6852045|6852045|6852045 X - 6851926 6851955 3'utr CG14434 FlyBase G65314.1 CCATAAAACATTCTGTGAGGCAAACAAAAA 5 6851942 0.908657898 3 5 17 1 0.903089987 0 0.6 0.75 5 0 0 8 X:6851926-6851955 6 CG14434 FBtr0071040|FBtr0071040|FBtr0071040|FBtr0343322|FBtr0343322|FBtr0343322|FBtr0345899|FBtr0345899|FBtr0345899 6851907|6851907|6851907|6851907|6851907|6851907|6851907|6851907|6851907 6852045|6852045|6852045|6852045|6852045|6852045|6852045|6852045|6852045 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X - 6851927 6851962 3'utr CG14434 FlyBase G49195.1 TTGTTATCCATAAAACATTCTGTGAGGCAAACAAAA 10 6851942 0.95233215 3 8 41 0.875 1.146128036 0 0.4 0.625 10 2 0 14 X:6851927-6851962 6 7.5 2964 FBgn0029915 147.6666667 23.04333333 35.10666667 0.050790068 0.325473745 0.213634637 -1 -1 -1 0.25 dme-bantam-3p 6mer2-7 GATCTC X 6879019 6879024 + X_6879019_6879024_+ 0.991650062 0.999932408 0.995791235 0.00585647 CG43736 FBtr0345898|FBtr0330265|FBtr0330263|FBtr0330268|FBtr0330264 6878698|6878698|6878698|6878698|6878698 6881580|6880502|6880429|6881580|6880095 X + 6878965 6879061 3'utr CG43736 FlyBase G59476.1 CGCCACCGCCAGCTCCGGCAGTTCCAGCCACACCACCCGGAGCGGGAACCATTGGATCTCCTGCACTATCAGCAACACCTGTACACACCACCAGCAA 53 6879017 0.952118737 7 51 225 0.966666667 1.462397998 0.266666667 0.113207547 0.216666667 53 1 1 58 X:6878965-6879061 6 CG43736 FBtr0345898|FBtr0330265|FBtr0330268|FBtr0330263|FBtr0330264 6878698|6878698|6878698|6878698|6878698 6881580|6880502|6881580|6880429|6880095 GATCTC 6mer2-7 dme-bantam-3p X + 6878965 6879063 3'utr CG43736 FlyBase G44982.1 CGCCACCGCCAGCTCCGGCAGTTCCAGCCACACCACCCGGAGCGGGAACCATTGGATCTCCTGCACTATCAGCAACACCTGTACACACCACCAGCAACA 43 6879026 0.950015205 7 42 182 0.985294118 1.826074803 0.25 0.348837209 0.588235294 43 1 0 67 X:6878965-6879063 6 43.5 2965 FBgn0263993 1284.363333 32.20666667 49.73 0.033868921 1.350652039 0.874723507 2 -7 -2.5 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 6958287 6958292 - X_6958287_6958292_- 0.832282695 0.582392162 0.707337429 0.176699267 CG32732 FBtr0071039 6958030 6958448 X - 6958274 6958310 3'utr CG32732 FlyBase G65319.1 CAGGTTTTGAAGTTGGATACCAAAATAACTTATAATT 14 6958294 0.725897259 6 10 89 0.705882353 1.079181246 0.294117647 0.214285714 0.352941176 14 5 0 12 X:6958274-6958310 6 CG32732 FBtr0071039 6958030 6958448 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X - 6958279 6958308 3'utr CG32732 FlyBase G49198.1 GGTTTTGAAGTTGGATACCAAAATAACTTA 8 6958294 0.737993789 4 7 44 0.9 0.954242509 0.1 0.25 0.4 8 1 0 9 X:6958279-6958308 6 11 2966 FBgn0052732 209.6666667 11.63 17.8 0.052464229 0.945829751 0.617977528 2 2 2 0.25 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC X 7098625 7098630 - X_7098625_7098630_- 0.527582879 0.901257985 0.714420432 0.264228197 CG4615 FBtr0071020 7098576 7099373 X - 7098605 7098715 3'utr CG4615 FlyBase G65350.1 ATTTACAAATACGCTTGATATCTTGATATTTTCGGGGCCTGGCTCGCGATCGGCGGATATAGCTTTCGTGTACTACTCGTATTTATGGTGCAGATCGATTAGTTTTAATGG 38 7098647 0.911034282 11 32 327 0.860465116 1.267171728 0.139534884 0.105263158 0.209302326 38 5 1 37 X:7098605-7098715 6 CG4615 FBtr0071020 7098576 7099373 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" X - 7098616 7098738 3'utr CG4615 FlyBase G49212.1 CGCAGATACTGAAGAAGGTGACTATTTACAAATACGCTTGATATCTTGATATTTTCGGGGCCTGGCTCGCGATCGGCGGATATAGCTTTCGTGTACTACTCGTATTTATGGTGCAGATCGATT 30 7098647 0.886985773 12 26 228 0.866666667 1.591064607 0.288888889 0.333333333 0.555555556 30 6 0 39 X:7098616-7098738 6 8 2967 FBgn0029935 110.3333333 6.846666667 10.52 0.072507553 1.168451801 0.760456274 17 17 17 0.25 dme-miR-283-5p 8mer-A1 TGATATTA X 7099063 7099070 - X_7099063_7099070_- 0.494757037 0.570897711 0.532827374 0.053839605 CG4615 FBtr0071020 7098576 7099373 X - 7099048 7099082 3'utr CG4615 FlyBase G65352.1 TCAACTTTAACTTGATATTATTAGCGATATTCATA 12 7099071 0.808919566 2 11 125 1 1.146128036 0 0.166666667 0.285714286 12 0 0 14 X:7099048-7099082 8 CG4615 FBtr0071020 7098576 7099373 TGATATTA 8mer-A1 dme-miR-283-5p X - 7098972 7099092 3'utr CG4615 FlyBase G49213.1 CCTCTCCCTCTCAACTTTAACTTGATATTATTAGCGATATTCATATATTTAGTATCCATAACGACCCGTTTTGGCCATGTGTTTCTCAAAAGACTTTGAACCGTACTCAAAAGGCAAAGGA 38 7099071 0.985942427 9 35 343 0.933333333 1.447158031 0.316666667 0.394736842 0.616666667 38 3 1 56 X:7098972-7099092 8 13 2968 FBgn0029935 110.3333333 6.846666667 10.52 0.117824773 1.898734177 1.235741445 1 1 1 0.25 dme-miR-263a-5p 8mer-m1 GTGCCATT X 7106600 7106607 - X_7106600_7106607_- 0.330375267 0.346019132 0.3381972 0.011061837 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 X - 7106533 7106651 3'utr fz4 FlyBase G65363.1 AAACGCAATTGCAATCGTAGCCGTAATGCCTAATTGTATTCAGTGTGCCATTAGCTTTAGGGACTTAACTGAAACGAGTCAATATCATGAAATTACCTTAAAAGAGTCCTTTTCCAGCA 189 7106601 0.837215011 15 178 1536 0.946188341 2.02325246 0.098654709 0.142857143 0.273542601 189 11 1 211 X:7106533-7106651 8 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 GTGCCATT 8mer-m1 dme-miR-263a-5p X - 7106506 7106644 3'utr fz4 FlyBase G49223.1 ATTGCAATCGTAGCCGTAATGCCTAATTGTATTCAGTGTGCCATTAGCTTTAGGGACTTAACTGAAACGAGTCAATATCATGAAATTACCTTAAAAGAGTCCTTTTCCAGCAACGAACTTTGGCGGAATTACTGAGGGT 139 7106601 0.986372923 15 129 1095 0.917030568 1.84509804 0.15720524 0.431654676 0.655021834 139 17 2 210 X:7106506-7106644 8 124 2969 FBgn0027342 197.34 6.033333333 9.256666667 0.62835715 20.55248619 13.39575081 -6 -6 -6 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA X 7106666 7106673 - X_7106666_7106673_- 0.316734032 0.342915606 0.329824819 0.018513187 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 X - 7106655 7106702 3'utr fz4 FlyBase G65364.1 TGCTGTCTTCTCCCGATGCCGAAACAAGTGTACTTAACAATCGAAAAA 261 7106674 0.914030738 4 257 1204 0.99044586 2.191730393 0.207006369 0.16091954 0.302547771 261 2 1 311 X:7106655-7106702 8 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 GTACTTAA 8mer-A1 dme-miR-252-5p X - 7106654 7106702 3'utr fz4 FlyBase G49224.1 TGCTGTCTTCTCCCGATGCCGAAACAAGTGTACTTAACAATCGAAAAAA 165 7106674 0.9099972 5 162 763 0.988593156 2.414973348 0.19391635 0.43030303 0.642585551 165 3 0 260 X:7106654-7106702 8 208 2970 FBgn0027342 197.34 6.033333333 9.256666667 1.054018445 34.47513812 22.47029168 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA X 7106767 7106774 - X_7106767_7106774_- 0.649438137 0.6495127 0.649475419 5.28E-05 fz4 FBtr0071018|FBtr0071018|FBtr0071018|FBtr0071017|FBtr0071017|FBtr0071017 7106270|7106270|7106270|7106270|7106270|7106270 7107380|7107380|7107380|7107380|7107380|7107380 X - 7106737 7106793 3'utr fz4 FlyBase G65365.1 AACGCGCAGCAACCAAATACTGTGATACGCATGTTCATGTCTTCAAAAACAAAAAAA 70 7106776 0.954505714 6 66 265 0.939759036 1.892094603 0.301204819 0.171428571 0.301204819 70 5 0 78 X:7106737-7106793 8 fz4 FBtr0071018|FBtr0071018|FBtr0071018|FBtr0071017|FBtr0071017|FBtr0071017 7106270|7106270|7106270|7106270|7106270|7106270 7107380|7107380|7107380|7107380|7107380|7107380 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 7106755 7106798 3'utr fz4 FlyBase G49225.1 AGAGAAACGCGCAGCAACCAAATACTGTGATACGCATGTTCATG 33 7106776 0.929823187 3 28 104 0.847457627 1.22184875 0.271186441 0.484848485 0.711864407 33 7 2 50 X:7106755-7106798 8 50 2971 FBgn0027342 197.34 6.033333333 9.256666667 0.253369819 8.287292818 5.401512423 2 2 2 0.25 dme-miR-252-5p 8mer-A1 GTACTTAA X 7106984 7106991 - X_7106984_7106991_- 0.311181214 0.338848181 0.325014697 0.019563523 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 X - 7106967 7107012 3'utr fz4 FlyBase G65366.2 TCATATCCTATTTTCCTGTGTGTACTTAATGTTGCTCCTAATTAGT 158 7106992 0.808230906 8 146 1920 0.924324324 2.23299611 0.021621622 0.139240506 0.264864865 158 14 0 171 X:7106967-7107012 8 fz4 FBtr0071018|FBtr0071017 7106270|7106270 7107380|7107380 GTACTTAA 8mer-A1 dme-miR-252-5p X - 7106971 7107017 3'utr fz4 FlyBase G49227.1 GGGCTTCATATCCTATTTTCCTGTGTGTACTTAATGTTGCTCCTAAT 123 7106992 0.799816306 7 119 1476 0.967914439 2.257678575 0.026737968 0.390243902 0.598930481 123 6 0 181 X:7106971-7107017 8 140 2972 FBgn0027342 197.34 6.033333333 9.256666667 0.709435492 23.20441989 15.12423479 1 1 1 0.25 dme-miR-33-5p 7mer-m8 CAATGCA X 7281196 7281202 - X_7281196_7281202_- 0.653243681 0.611713162 0.632478422 0.029366498 CG1677 FBtr0303415|FBtr0339819|FBtr0089712|FBtr0339820 7281087|7281087|7281087|7281087 7281438|7281438|7281438|7281438 X - 7281180 7281262 3'utr CG1677 FlyBase G65370.1 ATTCGCATCGTATTCGATATTGCCTTCGCCTGGGTGCAGCCGCTCGATCGCCATACAATTCAATGCATTTAGATTTAATAATC 53 7281203 0.990099778 12 50 506 0.948275862 1.740362689 0.103448276 0.094339623 0.172413793 53 3 0 55 X:7281180-7281262 7 CG1677 FBtr0089712|FBtr0339820|FBtr0303415|FBtr0339819 7281087|7281087|7281087|7281087 7281438|7281438|7281438|7281438 CAATGCA 7mer-m8 dme-miR-33-5p X - 7281133 7281248 3'utr CG1677 FlyBase G49232.1 CGATATTGCCTTCGCCTGGGTGCAGCCGCTCGATCGCCATACAATTCAATGCATTTAGATTTAATAATCATTATCCATTTTCCTACCCTGACTATTGCCAACTGAAGAGCATCAAT 51 7281195 0.985175751 15 38 397 0.784615385 1.707570176 0.138461538 0.254901961 0.415384615 51 14 0 51 X:7281133-7281248 7 37 2973 FBgn0029941 1454.373333 48.72333333 74.88666667 0.02544051 0.759389752 0.494079943 1 -7 -3 0.25 dme-bantam-3p 7mer-m8 TGATCTC X 7288893 7288899 - X_7288893_7288899_- 0.661603838 0.661612145 0.661607992 5.87E-06 unc-119 FBtr0071066|FBtr0346619 7288678|7288365 7289145|7289145 X - 7288868 7288978 5'utr unc-119 FlyBase G65393.2 ATATTATCACAGCCATTTTAGCCTTAGCACACCAAAGTTTTACCCACCATTCCTGTTTGATGTATTTAGCATCAAGATATGATCTCCTGCAAACGGAAACTAACACACAAA 384 7288899 0.97740174 9 374 2174 0.975 2.369215857 0.05625 0.203125 0.3625 384 11 1 468 X:7288868-7288978 7 unc-119 FBtr0346619|FBtr0071066 7288365|7288678 7289145|7289145 TGATCTC 7mer-m8 dme-bantam-3p X - 7288873 7288946 5'utr unc-119 FlyBase G49250.2 CAAAGTTTTACCCACCATTCCTGTTTGATGTATTTAGCATCAAGATATGATCTCCTGCAAACGGAAACTAACAC 284 7288891 0.848882889 10 278 1575 0.972850679 2.633468456 0.076923077 0.383802817 0.604072398 284 12 0 430 X:7288873-7288946 7 327.5 2974 FBgn0025549 924.56 49.97333333 77.10666667 0.354222549 6.553495197 4.24736296 0 -8 -4 0.25 dme-miR-7-5p 7mer-A1 TCTTCCA X 7310806 7310812 + X_7310806_7310812_+ 0.801566935 0.486329041 0.643947988 0.222906857 brk FBtr0071048 7310586 7311132 X + 7310775 7310837 3'utr brk FlyBase G59506.1 AAAAAATTGTATATCTAAGCGCAAACATATATCTTCCAAGCATATCAGCAAAAAAAACCCCAA 15 7310807 0.9674289 5 14 79 1 1.230448921 0 0.133333333 0.235294118 15 0 0 17 X:7310775-7310837 7 brk FBtr0071048 7310586 7311132 TCTTCCA 7mer-A1 dme-miR-7-5p X + 7310791 7310852 3'utr brk FlyBase G45002.1 AAGCGCAAACATATATCTTCCAAGCATATCAGCAAAAAAAACCCCAAACCCTAGGTATAAAC 15 7310807 0.97708675 5 12 72 0.869565217 1.301029996 0 0.333333333 0.565217391 15 3 0 20 X:7310791-7310852 7 13 2975 FBgn0024250 227.5733333 8.686666667 13.37 0.057124443 1.496546431 0.972326103 -1 -1 -1 0.25 dme-miR-308-3p 8mer-m1 CTGTGATT X 7328137 7328144 + X_7328137_7328144_+ 0.38316968 0.385312442 0.384241061 0.001515118 Dok FBtr0071049 7327562 7328806 X + 7328114 7328344 3'utr Dok FlyBase G59524.1 GTTAATTATGTTAAATTCGTAATCTGTGATTGTATTGTTAATTGTGAAACTGTTACATTTTTAGCAAGCACTGCCCGCCACTTGATGATCGCACTCGAAAAATTCCCCCGGCTCTTACTTAAAATGTAGTGTTAAATTAAAGCAAGAGAAAAATGAAACTCAATCGAATCATGGACGTAACGAAAATTTACAAAATGTGTATGCGATTTATGCTAAATATATGTGTTTTTG 141 7328136 0.992598651 28 128 1472 0.904761905 2.181843588 0.369047619 0.177304965 0.30952381 141 16 0 152 X:7328114-7328344 8 Dok FBtr0071049 7327562 7328806 CTGTGATT 8mer-m1 dme-miR-308-3p X + 7328116 7328295 3'utr Dok FlyBase G45010.1 TAATTATGTTAAATTCGTAATCTGTGATTGTATTGTTAATTGTGAAACTGTTACATTTTTAGCAAGCACTGCCCGCCACTTGATGATCGCACTCGAAAAATTCCCCCGGCTCTTACTTAAAATGTAGTGTTAAATTAAAGCAAGAGAAAAATGAAACTCAATCGAATCATGGACGTAACG 108 7328136 0.999173397 20 97 1128 0.889570552 1.559308011 0.429447853 0.398148148 0.601226994 108 15 3 145 X:7328116-7328295 8 84 2976 FBgn0029944 523.09 18.16 27.87 0.160584221 4.625550661 3.013993541 1 1 1 0.25 dme-miR-8-3p 7mer-m8 CAGTATT X 761536 761542 + X_761536_761542_+ 0.452124982 0.661615188 0.556870085 0.148131941 CG5273 FBtr0070137|FBtr0070136|FBtr0070135 761360|761360|761360 761939|761939|761939 X + 761507 761552 3'utr CG5273 FlyBase G57844.1 CTTGAATTATGCCGTACCATCTCCGACTACAGTATTTGTGGATAAA 9 761543 0.682774663 5 9 62 1 1 0.2 0.111111111 0.2 9 0 0 10 X:761507-761552 7 CG5273 FBtr0070135|FBtr0070137|FBtr0070136 761360|761360|761360 761939|761939|761939 CAGTATT 7mer-m8 dme-miR-8-3p X + 761496 761552 3'utr CG5273 FlyBase G43761.1 GGACAAAAACTCTTGAATTATGCCGTACCATCTCCGACTACAGTATTTGTGGATAAA 7 761543 0.982284897 6 7 53 1 0.84509804 0.428571429 0 0 7 0 0 7 X:761496-761552 7 5.5 2977 FBgn0040382 52 2.953333333 4.456666667 0.105769231 1.862302483 1.234106208 -7 -7 -7 0.25 dme-miR-308-3p 7mer-m1 TGTGATT X 761603 761609 + X_761603_761609_+ 0.519486515 0.517159064 0.51832279 0.00164572 CG5273 FBtr0070137|FBtr0070136|FBtr0070135 761360|761360|761360 761939|761939|761939 X + 761574 761631 3'utr CG5273 FlyBase G57845.1 AAGCCCCCTTTTCCAATTTGGCCTTCAATTGTGATTGTTGCGGTGTGCATGGGCCCCG 98 761602 0.691776247 10 92 1007 0.929824561 1.326335861 0.394736842 0.112244898 0.236842105 98 4 4 106 X:761574-761631 7 CG5273 FBtr0070135|FBtr0070137|FBtr0070136 761360|761360|761360 761939|761939|761939 TGTGATT 7mer-m1 dme-miR-308-3p X + 761575 761637 3'utr CG5273 FlyBase G43762.1 AGCCCCCTTTTCCAATTTGGCCTTCAATTGTGATTGTTGCGGTGTGCATGGGCCCCGTAACCG 57 761602 0.991493225 5 54 573 0.947368421 1.653212514 0.357894737 0.543859649 0.726315789 57 4 1 90 X:761575-761637 7 76.5 2978 FBgn0040382 52 2.953333333 4.456666667 1.471153846 25.90293454 17.16529544 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 761863 761868 + X_761863_761868_+ 0.640178857 0.609308026 0.624743441 0.021829023 CG5273 FBtr0070137|FBtr0070137|FBtr0070137|FBtr0070136|FBtr0070136|FBtr0070136|FBtr0070135|FBtr0070135|FBtr0070135 761360|761360|761360|761360|761360|761360|761360|761360|761360 761939|761939|761939|761939|761939|761939|761939|761939|761939 X + 761811 761908 3'utr CG5273 FlyBase G57848.1 AGTGTGTATTTTTCTAGACTTGTTAGCGTAATTGTTGCTTGTTTTTGTATTGCTGTGAGCAAACGTATTTGTTGCACTCTTCAATTGTTGAATAAAAT 43 761833 0.993005276 10 39 473 0.903846154 1.070037867 0.211538462 0.214285714 0.365384615 42 2 3 47 X:761811-761908 6 CG5273 FBtr0070135|FBtr0070135|FBtr0070135|FBtr0070137|FBtr0070137|FBtr0070137|FBtr0070136|FBtr0070136|FBtr0070136 761360|761360|761360|761360|761360|761360|761360|761360|761360 761939|761939|761939|761939|761939|761939|761939|761939|761939 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X + 761797 761886 3'utr CG5273 FlyBase G43764.2 AAGTTCCCACTAAAAGTGTGTATTTTTCTAGACTTGTTAGCGTAATTGTTGCTTGTTTTTGTATTGCTGTGAGCAAACGTATTTGTTGCA 35 761833 0.990952476 11 33 355 0.94 1.672097858 0.22 0.371428571 0.56 35 3 0 47 X:761797-761886 6 13 2979 FBgn0040382 52 2.953333333 4.456666667 0.25 4.401805869 2.91697831 30 30 30 0.25 dme-miR-308-3p 7mer-m1 TGTGATT X 7674693 7674699 + X_7674693_7674699_+ 0.508415145 0.468568054 0.488491599 0.028176084 ct FBtr0305134|FBtr0114613|FBtr0331733|FBtr0071068 7674616|7674616|7674616|7674616 7678259|7678259|7678859|7678259 X + 7674621 7674744 3'utr ct FlyBase G59555.1 AAAAAAATTAACAGAACTAAATATAAATTCAGTGCAATGTGTAGAGAAGCGGAGATGGTTAACGCGTTTACTTGTGATTAAGTTTGAATGTTTAGACGATGTGAGGAGCCAGGAGACATACATA 63 7674692 0.937190466 16 56 444 0.903614458 1.273001272 0.313253012 0.26984127 0.445783133 63 5 3 75 X:7674621-7674744 7 ct FBtr0331733|FBtr0071068|FBtr0305134|FBtr0114613 7674616|7674616|7674616|7674616 7678859|7678259|7678259|7678259 TGTGATT 7mer-m1 dme-miR-308-3p X + 7674633 7674749 3'utr ct FlyBase G45026.1 AGAACTAAATATAAATTCAGTGCAATGTGTAGAGAAGCGGAGATGGTTAACGCGTTTACTTGTGATTAAGTTTGAATGTTTAGACGATGTGAGGAGCCAGGAGACATACATACATAT 37 7674692 0.985683366 11 33 271 0.868852459 1.72427587 0.409836066 0.432432432 0.655737705 37 8 0 53 X:7674633-7674749 7 28 2980 FBgn0004198 1981.64 22.68666667 34.95666667 0.014129711 1.234205113 0.800991704 1 1 1 0.25 dme-miR-14-3p 7mer-m8 AAGACTG X 7675081 7675087 + X_7675081_7675087_+ 0.658468131 0.653747878 0.656108005 0.003337685 ct FBtr0305134|FBtr0114613|FBtr0331733|FBtr0071068 7674616|7674616|7674616|7674616 7678259|7678259|7678859|7678259 X + 7675061 7675114 3'utr ct FlyBase G59558.1 TTTCGATTTGTTTCTACTTGAAGACTGTAAGCAAAGGCGGTAGGATTGATAACT 27 7675079 0.755817829 9 23 177 0.862068966 1.397940009 0.344827586 0.037037037 0.103448276 27 4 0 25 X:7675061-7675114 7 ct FBtr0331733|FBtr0071068|FBtr0305134|FBtr0114613 7674616|7674616|7674616|7674616 7678859|7678259|7678259|7678259 AAGACTG 7mer-m8 dme-miR-14-3p X + 7675064 7675101 3'utr ct FlyBase G45028.1 CGATTTGTTTCTACTTGAAGACTGTAAGCAAAGGCGGT 13 7675078 0.965829158 6 12 81 0.947368421 1.255272505 0.368421053 0.307692308 0.526315789 13 1 0 18 X:7675064-7675101 7 18.5 2981 FBgn0004198 1981.64 22.68666667 34.95666667 0.009335702 0.81545695 0.529226662 2 3 2.5 0.25 dme-bantam-3p 8mer-A1 TGATCTCA X 7675334 7675341 + X_7675334_7675341_+ 0.630369218 0.630758772 0.630563995 0.000275489 ct FBtr0305134|FBtr0114613|FBtr0331733|FBtr0071068 7674616|7674616|7674616|7674616 7678259|7678259|7678859|7678259 X + 7675308 7675352 3'utr ct FlyBase G59559.1 AGCAACCGACTTGTTTAACTATCTTTTGATCTCAAGCAAAAAAAC 101 7675333 0.671724459 7 94 893 0.920634921 1.462397998 0.079365079 0.207920792 0.365079365 101 7 3 116 X:7675308-7675352 8 ct FBtr0331733|FBtr0071068|FBtr0305134|FBtr0114613 7674616|7674616|7674616|7674616 7678859|7678259|7678259|7678259 TGATCTCA 8mer-A1 dme-bantam-3p X + 7675307 7675354 3'utr ct FlyBase G45029.1 CAGCAACCGACTTGTTTAACTATCTTTTGATCTCAAGCAAAAAAACAA 64 7675333 0.97423803 8 60 507 0.944444444 1.62838893 0.033333333 0.34375 0.533333333 64 4 1 85 X:7675307-7675354 8 80 2982 FBgn0004198 1981.64 22.68666667 34.95666667 0.040370602 3.526300323 2.288547726 1 1 1 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 7684309 7684314 - X_7684309_7684314_- 0.997944633 0.999940234 0.998942434 0.001411102 CHES-1-like FBtr0112946|FBtr0310287|FBtr0333203 7683456|7682336|7683456 7685914|7685914|7685914 X - 7684251 7684363 3'utr CHES-1-like FlyBase G65414.1 CGAAAGGAAAAAAACTTGACAAAGAACGCCCTAAGTGTTTACACTTCATGTACCTTTTTAGCAAAAAGCAAAAAACGCAAAAGCAAAGATCGCATTAAAATTGTATACATACA 266 7684315 0.989886426 10 259 2554 0.975384615 1.898999271 0.101538462 0.191729323 0.338461538 266 5 3 317 X:7684251-7684363 6 CHES-1-like FBtr0310287|FBtr0333203|FBtr0112946 7682336|7683456|7683456 7685914|7685914|7685914 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X - 7684291 7684360 3'utr CHES-1-like FlyBase G49263.1 AAGGAAAAAAACTTGACAAAGAACGCCCTAAGTGTTTACACTTCATGTACCTTTTTAGCAAAAAGCAAAA 145 7684315 0.968389814 7 139 1381 0.963133641 1.621176282 0.119815668 0.35862069 0.571428571 145 4 4 209 X:7684291-7684360 6 198 2983 FBgn0029504 1761.533333 36.18333333 55.28333333 0.112402074 5.472132658 3.581549593 1 1 1 0.25 dme-miR-980-5p 7mer-A1 AAAAACA X 7684955 7684961 - X_7684955_7684961_- 0.612995173 0.497456991 0.555226082 0.081697845 CHES-1-like FBtr0112946|FBtr0071079|FBtr0310287|FBtr0333203 7683456|7684885|7682336|7683456 7685914|7685914|7685914|7685914 X - 7684935 7684990 3'utr CHES-1-like FlyBase G65417.1 AGATCCAAAACACCCTACTTACATGATCTAAAAACAAGCGATATAAAAATATATAC 19 7684967 0.963327577 5 18 97 0.95 0.977723605 0 0.052631579 0.1 19 0 1 19 X:7684935-7684990 7 CHES-1-like FBtr0310287|FBtr0333203|FBtr0112946|FBtr0071079 7682336|7683456|7683456|7684885 7685914|7685914|7685914|7685914 AAAAACA 7mer-A1 dme-miR-980-5p X - 7684941 7684991 3'utr CHES-1-like FlyBase G49267.1 AAGATCCAAAACACCCTACTTACATGATCTAAAAACAAGCGATATAAAAAT 15 7684968 0.683008575 3 12 73 0.807692308 1.322219295 0.076923077 0.466666667 0.692307692 15 5 0 21 X:7684941-7684991 7 16 2984 FBgn0029504 1761.533333 36.18333333 55.28333333 0.009082996 0.442192538 0.289418149 6 7 6.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 7685585 7685590 - X_7685585_7685590_- 0.99873611 0.829351186 0.914043648 0.119773211 CHES-1-like FBtr0112946|FBtr0112946|FBtr0112946|FBtr0071079|FBtr0071079|FBtr0071079|FBtr0310287|FBtr0310287|FBtr0310287|FBtr0333203|FBtr0333203|FBtr0333203 7683456|7683456|7683456|7684885|7684885|7684885|7682336|7682336|7682336|7683456|7683456|7683456 7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914 X - 7685564 7685602 3'utr CHES-1-like FlyBase G65419.1 AGGATTTTTTTTCTGTGACTTTACTGTGCCCCGCAATTA 7 7685592 0.99353295 5 7 78 1 1 0.2 0.428571429 0.6 7 0 0 10 X:7685564-7685602 6 CHES-1-like FBtr0310287|FBtr0310287|FBtr0310287|FBtr0333203|FBtr0333203|FBtr0333203|FBtr0112946|FBtr0112946|FBtr0112946|FBtr0071079|FBtr0071079|FBtr0071079 7682336|7682336|7682336|7683456|7683456|7683456|7683456|7683456|7683456|7684885|7684885|7684885 7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X - 7685564 7685605 3'utr CHES-1-like FlyBase G49269.1 TTTAGGATTTTTTTTCTGTGACTTTACTGTGCCCCGCAATTA 13 7685592 0.982777924 6 11 136 1 1.278753601 0.210526316 0.307692308 0.526315789 13 0 0 19 X:7685564-7685605 6 9 2985 FBgn0029504 1761.533333 36.18333333 55.28333333 0.005109185 0.248733303 0.162797709 2 2 2 0.25 dme-miR-79-3p 8mer-A1 TAGCTTTA X 7731283 7731290 + X_7731283_7731290_+ 0.547973829 0.546201461 0.547087645 0.001253205 CG12155 FBtr0071071 7731144 7731729 X + 7731255 7731350 3'utr CG12155 FlyBase G59573.1 CAAGTTCGTGGATTCCGCGTTCTTCAATTAGCTTTATCCTCCACCCACGAAACCCCGGATCCCTGTATCCTTCACCCCTCTACACCATCCATTCGA 107 7731282 0.814626075 8 104 1026 0.965811966 1.752048448 0.042735043 0.08411215 0.162393162 107 3 1 113 X:7731255-7731350 8 CG12155 FBtr0071071 7731144 7731729 TAGCTTTA 8mer-A1 dme-miR-79-3p X + 7731218 7731303 3'utr CG12155 FlyBase G45038.1 ATGTATAGGATTAGGATGCGTACCGTTTACCAGTTTGCAAGTTCGTGGATTCCGCGTTCTTCAATTAGCTTTATCCTCCACCCACG 46 7731282 0.990999509 5 43 450 0.935483871 1.286306739 0.096774194 0.260869565 0.451612903 46 2 2 58 X:7731218-7731303 8 72 2986 FBgn0029957 249.8233333 11.22666667 17.11333333 0.288203664 6.413301663 4.207245812 1 1 1 0.25 dme-miR-34-5p 6mer2-7 ACTGCC X 7896695 7896700 + X_7896695_7896700_+ 0.99163208 0.972777035 0.982204558 0.013332569 p115 FBtr0071089|FBtr0340162 7896636|7896636 7896786|7896991 X + 7896672 7896711 3'utr p115 FlyBase G59609.2 ATGTTACAACTGGAAATTGCTCGACTGCCCTAAAAACGTT 35 7896691 0.671608008 7 28 170 0.829268293 0.929418926 0.024390244 0.114285714 0.243902439 35 4 3 34 X:7896672-7896711 6 p115 FBtr0071089|FBtr0340162 7896636|7896636 7896786|7896991 ACTGCC 6mer2-7 dme-miR-34-5p X + 7896649 7896708 3'utr p115 FlyBase G45057.1 CGGATGAGTTGCTAGCCACGTACATGTTACAACTGGAAATTGCTCGACTGCCCTAAAAAC 28 7896690 0.971030347 6 25 144 0.885714286 0.792391689 0 0.214285714 0.371428571 28 0 4 31 X:7896649-7896708 6 28.5 2987 FBgn0040087 268.6666667 11.33 17.27666667 0.106079404 2.515445719 1.64962377 4 5 4.5 0.25 dme-miR-2a-2-5p 6mer3-8 TGATGA X 7921540 7921545 + X_7921540_7921545_+ 0.999056146 0.999957868 0.999507007 0.000637669 Ykt6 FBtr0071093 7921363 7921966 X + 7921513 7921557 3'utr Ykt6 FlyBase G59657.1 TCCAAGGGAGCGGTGCGACTTGGGCTTTGATGATTGCTTTTTATA 9 7921553 0.986336974 6 9 81 1 0.954242509 0.111111111 0 0 9 0 0 9 X:7921513-7921557 6 Ykt6 FBtr0071093 7921363 7921966 TGATGA 6mer3-8 dme-miR-2a-2-5p X + 7921502 7921564 3'utr Ykt6 FlyBase G45102.1 ACCAAACAAACTCCAAGGGAGCGGTGCGACTTGGGCTTTGATGATTGCTTTTTATAAATGAAT 11 7921533 0.984549538 6 10 82 1 1.255272505 0.111111111 0.454545455 0.666666667 11 0 0 18 X:7921502-7921564 6 5.5 2988 FBgn0260858 601.62 50.32 77.46 0.009141983 0.109300477 0.071004389 -13 7 -3 0.25 dme-miR-965-3p 7mer-m8 TACGCTT X 7921678 7921684 + X_7921678_7921684_+ 0.395324546 0.620128414 0.50772648 0.158960362 Ykt6 FBtr0071093 7921363 7921966 X + 7921667 7921705 3'utr Ykt6 FlyBase G59658.1 CTGTATATGTCTACGCTTTGGATATCTAAATGTTAATTA 26 7921685 0.741762841 5 25 216 0.975 1.591064607 0.025 0.461538462 0.65 26 1 0 39 X:7921667-7921705 7 Ykt6 FBtr0071093 7921363 7921966 TACGCTT 7mer-m8 dme-miR-965-3p X + 7921663 7921697 3'utr Ykt6 FlyBase G45103.1 CTGTCTGTATATGTCTACGCTTTGGATATCTAAAT 12 7921685 0.648547452 3 12 103 1 1.278753601 0 0.5 0.684210526 12 0 0 19 X:7921663-7921697 7 19 2989 FBgn0260858 601.62 50.32 77.46 0.031581397 0.377583466 0.245287891 -7 -7 -7 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 7922994 7923000 - X_7922994_7923000_- 0.520186816 0.51903227 0.519609543 0.000816355 CG10777 FBtr0071132|FBtr0071132|FBtr0071132 7922156|7922156|7922156 7927227|7927227|7927227 X - 7922982 7923020 3'utr CG10777 FlyBase G65464.1 AAGTTGAAACCAAAACCCATTGTGATAACAGCTGCGTAA 51 7923001 0.861246483 3 48 219 0.945454545 1.238882089 0.036363636 0.078431373 0.145454545 51 1 2 52 X:7922982-7923020 7 CG10777 FBtr0071132|FBtr0071132|FBtr0071132 7922156|7922156|7922156 7927227|7927227|7927227 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 7922951 7923017 3'utr CG10777 FlyBase G49299.1 TTGAAACCAAAACCCATTGTGATAACAGCTGCGTAAACGAAACACGTTAGAACCTTACTTGTACGTA 34 7923001 0.941499744 3 32 131 0.960784314 1.213074825 0.078431373 0.411764706 0.607843137 34 0 2 49 X:7922951-7923017 7 41.5 2990 FBgn0029979 3423.163333 51.95333333 79.74333333 0.012123289 0.798793789 0.52041968 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 7924519 7924525 - X_7924519_7924525_- 0.63301994 0.66789273 0.650456335 0.024658793 CG10777 FBtr0344137|FBtr0344137|FBtr0344137|FBtr0071132|FBtr0071132|FBtr0071132 7924137|7924137|7924137|7922156|7922156|7922156 7927227|7927227|7927227|7927227|7927227|7927227 X - 7924489 7924558 3'utr CG10777 FlyBase G65468.1 AATTATGATTTTGATGCAACCGAATTGTGATGATGTGATAGACTTATATAAACAAACGAAAATACAAAAA 364 7924520 0.807271543 10 345 2483 0.943478261 1.407040808 0.519565217 0.197802198 0.365217391 364 10 16 434 X:7924489-7924558 7 CG10777 FBtr0071132|FBtr0071132|FBtr0071132|FBtr0344137|FBtr0344137|FBtr0344137 7922156|7922156|7922156|7924137|7924137|7924137 7927227|7927227|7927227|7927227|7927227|7927227 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 7924488 7924554 3'utr CG10777 FlyBase G49303.1 ATGATTTTGATGCAACCGAATTGTGATGATGTGATAGACTTATATAAACAAACGAAAATACAAAAAT 291 7924520 0.979076325 10 287 1966 0.981351981 2.3232521 0.524475524 0.374570447 0.575757576 291 7 1 421 X:7924488-7924554 7 325 2991 FBgn0029979 3423.163333 51.95333333 79.74333333 0.094941424 6.255614013 4.075575806 -5 -5 -5 0.25 dme-miR-980-3p 7mer-m8 GGCAGCT X 7925176 7925182 - X_7925176_7925182_- 0.653001014 0.652373777 0.652687395 0.000443497 CG10777 FBtr0344137|FBtr0071132 7924137|7922156 7927227|7927227 X - 7925147 7925210 3'utr CG10777 FlyBase G65472.1 GAGTAAATTAGTAGTAGTAACATTAATTGGCAGCTCCAGTCATATAGTTAGCAGTAATATATCC 750 7925184 0.821555035 10 731 5949 0.972619048 2.213252052 0.082142857 0.106666667 0.202380952 750 19 4 817 X:7925147-7925210 7 CG10777 FBtr0071132|FBtr0344137 7922156|7924137 7927227|7927227 GGCAGCT 7mer-m8 dme-miR-980-3p X - 7925119 7925210 3'utr CG10777 FlyBase G49308.1 GAGTAAATTAGTAGTAGTAACATTAATTGGCAGCTCCAGTCATATAGTTAGCAGTAATATATCCATATATCGTCTGTTCAAGCAGTTGTCCA 547 7925184 0.983931593 11 536 4195 0.978773585 2.317018101 0.091981132 0.402193784 0.614386792 547 15 3 830 X:7925119-7925210 7 639 2992 FBgn0029979 3423.163333 51.95333333 79.74333333 0.186669445 12.29949955 8.013209046 2 2 2 0.25 dme-miR-317-3p 7mer-m8 TGTGTTC X 7926874 7926880 - X_7926874_7926880_- 0.650328775 0.660595093 0.655461934 0.00725937 CG10777 FBtr0344137|FBtr0071132 7924137|7922156 7927227|7927227 X - 7926853 7926946 5'utr CG10777 FlyBase G65475.1 ACCAAAATCGTTGCCTTTTTGTTTCTATATTTATTCACACCTCACTACTAATATTAGTAGAACATTTGTGTTCTCTTTCGCTTATTTAAGCATT 18 7926881 0.92980884 7 18 193 1 1.380211242 0 0.333333333 0.5 18 0 0 24 X:7926853-7926946 7 CG10777 FBtr0071132|FBtr0344137 7922156|7924137 7927227|7927227 TGTGTTC 7mer-m8 dme-miR-317-3p X - 7926857 7926893 5'utr CG10777 FlyBase G49309.1 TTAGTAGAACATTTGTGTTCTCTTTCGCTTATTTAAG 6 7926881 0.983584543 3 6 64 1 0.954242509 0.111111111 0.333333333 0.555555556 6 0 0 9 X:7926857-7926893 7 9.5 2993 FBgn0029979 3423.163333 51.95333333 79.74333333 0.002775211 0.18285641 0.119132216 1 1 1 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG X 8040319 8040324 - X_8040319_8040324_- 0.991440993 0.994156026 0.992798509 0.001919795 fs(1)h FBtr0071119|FBtr0333307 8038789|8037806 8040978|8040978 X - 8040256 8040469 3'utr fs(1)h FlyBase G65547.1 AAAAAAAATGGCAAATTTCCTTCGGTTAGCAAATGATTCTTCGCAATTTTTTTAAAAATCACTTACCATCTCGCTTATTATTTTGTATTAAAATTACGATTATGATGATAATGGATCGTGGCGACAAAGATGTCCGCACATGTTTCCAAAGCTTATTATTTTTAATATTATTGATTGCCTAGGCAAGTTTAGTTCGTAGGTATACACTTAATTG 59 8040327 0.854125527 29 55 523 0.893333333 1.826074803 0.253333333 0.220338983 0.386666667 59 8 0 67 X:8040256-8040469 6 fs(1)h FBtr0333307|FBtr0071119 8037806|8038789 8040978|8040978 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" X - 8040303 8040339 3'utr fs(1)h FlyBase G49359.2 TGTCCGCACATGTTTCCAAAGCTTATTATTTTTAATA 10 8040327 0.670952118 3 8 100 0.823529412 1.146128036 0 0.5 0.705882353 10 3 0 14 X:8040303-8040339 6 11 2994 FBgn0004656 6894.06 89.92333333 138.4833333 0.001595576 0.122326426 0.079431941 3 3 3 0.25 dme-miR-2a-2-5p 6mer3-8 TGATGA X 8040362 8040367 - X_8040362_8040367_- 0.989876494 0.91908161 0.954479052 0.050059554 fs(1)h FBtr0071119|FBtr0333307 8038789|8037806 8040978|8040978 X - 8040256 8040469 3'utr fs(1)h FlyBase G65547.1 AAAAAAAATGGCAAATTTCCTTCGGTTAGCAAATGATTCTTCGCAATTTTTTTAAAAATCACTTACCATCTCGCTTATTATTTTGTATTAAAATTACGATTATGATGATAATGGATCGTGGCGACAAAGATGTCCGCACATGTTTCCAAAGCTTATTATTTTTAATATTATTGATTGCCTAGGCAAGTTTAGTTCGTAGGTATACACTTAATTG 59 8040366 0.854125527 29 55 523 0.893333333 1.826074803 0.253333333 0.220338983 0.386666667 59 8 0 67 X:8040256-8040469 6 fs(1)h FBtr0333307|FBtr0071119 8037806|8038789 8040978|8040978 TGATGA 6mer3-8 dme-miR-2a-2-5p X - 8040342 8040369 3'utr fs(1)h FlyBase G49360.1 TATGATGATAATGGATCGTGGCGACAAA 8 8040360 0.600155971 4 8 37 1 0.954242509 0.222222222 0.125 0.222222222 8 0 0 9 X:8040342-8040369 6 11.5 2995 FBgn0004656 6894.06 89.92333333 138.4833333 0.001668103 0.127886718 0.083042484 -1 -7 -4 0.25 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 8047748 8047754 - X_8047748_8047754_- 0.655965541 0.654565774 0.655265657 0.000989737 fs(1)h FBtr0333309|FBtr0333308|FBtr0071118|FBtr0071120|FBtr0071121|FBtr0071122 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 X - 8047694 8047777 3'utr fs(1)h FlyBase G65563.1 TCTGTGCCAATTTCACATGTTTTTCTAGTCCTGTTTCTTGATAATTCAAATGTGTTAATCCAAGCTCCATTGTGACGATCCCTA 40 8047755 0.902335445 6 39 459 1 1.681241237 0.0625 0.125 0.270833333 40 0 0 48 X:8047694-8047777 7 fs(1)h FBtr0071121|FBtr0071122|FBtr0071120|FBtr0071118|FBtr0333309|FBtr0333308 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X - 8047736 8047769 3'utr fs(1)h FlyBase G49371.1 AATTTCACATGTTTTTCTAGTCCTGTTTCTTGAT 31 8047755 0.691819958 6 31 369 1 1.681241237 0.041666667 0.419354839 0.625 31 0 0 48 X:8047736-8047769 7 33 2996 FBgn0004656 6894.06 89.92333333 138.4833333 0.004786729 0.366979279 0.238295824 1 1 1 0.25 dme-miR-282-5p 6mer3-8 AGAGGC X 8048006 8048011 - X_8048006_8048011_- 0.922191785 0.734840322 0.828516053 0.132477516 fs(1)h FBtr0333309|FBtr0333308|FBtr0071118|FBtr0071120|FBtr0071121|FBtr0071122 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 X - 8047965 8048028 3'utr fs(1)h FlyBase G65564.1 ATGAGTATATATATCTCAGAGGCAGCTTACTAGCAATCTTCATCGATCATCATTATATCCATTC 37 8048000 0.978616371 5 33 229 0.871794872 1.054357662 0.025641026 0.054054054 0.102564103 37 3 2 34 X:8047965-8048028 6 fs(1)h FBtr0071121|FBtr0071122|FBtr0071120|FBtr0071118|FBtr0333309|FBtr0333308 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 AGAGGC 6mer3-8 dme-miR-282-5p X - 8047953 8048028 3'utr fs(1)h FlyBase G49372.1 ATGAGTATATATATCTCAGAGGCAGCTTACTAGCAATCTTCATCGATCATCATTATATCCATTCACCACTCCCCCA 30 8048000 0.975591747 7 27 176 0.913043478 1.62324929 0 0.433333333 0.630434783 30 4 0 42 X:8047953-8048028 6 32 2997 FBgn0004656 6894.06 89.92333333 138.4833333 0.004641677 0.355858694 0.231074738 -11 -11 -11 0.25 dme-miR-2a-2-5p 6mer3-8 TGATGA X 8049214 8049219 - X_8049214_8049219_- 0.773805762 0.996161778 0.88498377 0.157229435 fs(1)h FBtr0333309|FBtr0333308|FBtr0071118|FBtr0071120|FBtr0071121|FBtr0071122 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 X - 8049208 8049247 3'utr fs(1)h FlyBase G65569.1 AAATTGAAACTTCCATTTGCCAATCGTCTGATGACTGATA 6 8049231 0.964691336 4 4 49 0.625 0.698970004 0 0.333333333 0.5 6 3 0 5 X:8049208-8049247 6 fs(1)h FBtr0071121|FBtr0071122|FBtr0071120|FBtr0071118|FBtr0333309|FBtr0333308 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 TGATGA 6mer3-8 dme-miR-2a-2-5p X - 8049206 8049233 3'utr fs(1)h FlyBase G49376.1 ATTTGCCAATCGTCTGATGACTGATATG 6 8049231 0.738476468 5 5 39 0.8 0.903089987 0 0.5 0.7 6 2 0 8 X:8049206-8049233 6 6 2998 FBgn0004656 6894.06 89.92333333 138.4833333 0.000870314 0.066723505 0.043326513 12 12 12 0.25 dme-miR-34-5p 7mer-A1 ACTGCCA X 8069173 8069179 + X_8069173_8069179_+ 0.795660711 0.812947478 0.804304094 0.012223614 mys FBtr0340135|FBtr0340137|FBtr0071105|FBtr0340136 8068934|8068934|8068934|8068934 8070237|8070237|8070237|8070237 X + 8069129 8069211 3'utr mys FlyBase G59706.1 CATCGACGAAGCTGCTTTGCCCGGGTGCAAAACCACTGAAGTCAACTGCCATTGAAACGCGTTCTAAACTAAGTCAGCCCTAT 68 8069180 0.844709416 8 68 285 1 1.986771734 0.195876289 0.294117647 0.505154639 68 0 0 97 X:8069129-8069211 7 mys FBtr0071105|FBtr0340136|FBtr0340135|FBtr0340137 8068934|8068934|8068934|8068934 8070237|8070237|8070237|8070237 ACTGCCA 7mer-A1 dme-miR-34-5p X + 8069133 8069209 3'utr mys FlyBase G45139.1 GACGAAGCTGCTTTGCCCGGGTGCAAAACCACTGAAGTCAACTGCCATTGAAACGCGTTCTAAACTAAGTCAGCCCT 63 8069180 0.949332646 11 62 269 0.990196078 2.004321374 0.264705882 0.428571429 0.647058824 63 1 0 101 X:8069133-8069209 7 60 2999 FBgn0004657 3546.84 102.2566667 157.0266667 0.016916466 0.58675881 0.382100705 -7 -7 -7 0.25 dme-miR-263a-5p 7mer-m1 TGCCATT X 8070017 8070023 + X_8070017_8070023_+ 0.764515003 0.714910569 0.739712786 0.035075608 mys FBtr0340135|FBtr0340137|FBtr0071105|FBtr0340136 8068934|8068934|8068934|8068934 8070237|8070237|8070237|8070237 X + 8070007 8070052 3'utr mys FlyBase G59712.1 ATATATTTTTTGCCATTTGTACTGATTACTGATTAACATTTAAAGT 67 8070023 0.642860456 12 64 695 0.949367089 1.574031268 0.050632911 0.149253731 0.278481013 67 3 1 75 X:8070007-8070052 7 mys FBtr0071105|FBtr0340136|FBtr0340135|FBtr0340137 8068934|8068934|8068934|8068934 8070237|8070237|8070237|8070237 TGCCATT 7mer-m1 dme-miR-263a-5p X + 8070003 8070047 3'utr mys FlyBase G45143.1 AAATATATATTTTTTGCCATTTGTACTGATTACTGATTAACATTT 41 8070023 0.729219999 10 36 433 0.859375 1.439332694 0.046875 0.390243902 0.609375 41 8 1 55 X:8070003-8070047 7 48 3000 FBgn0004657 3546.84 102.2566667 157.0266667 0.013533173 0.469407048 0.305680564 -6 -6 -6 0.25 dme-miR-252-5p 6mer3-8 GTACTT X 8070346 8070351 - X_8070346_8070351_- 0.96772111 0.978000812 0.972860961 0.007268846 Upf2 FBtr0071117 8070242 8071284 X - 8070325 8070365 3'utr Upf2 FlyBase G65602.1 TGCATTGATGCTAGGTACTTTATCTCATGTTGTATAAGAAA 13 8070338 0.628639137 4 12 138 0.923076923 1.079181246 0.153846154 0 0 13 1 0 12 X:8070325-8070365 6 Upf2 FBtr0071117 8070242 8071284 GTACTT 6mer3-8 dme-miR-252-5p X - 8070326 8070364 3'utr Upf2 FlyBase G49403.1 GCATTGATGCTAGGTACTTTATCTCATGTTGTATAAGAA 6 8070338 0.640406874 3 6 60 1 1.041392685 0.363636364 0.666666667 0.818181818 6 0 0 11 X:8070326-8070364 6 9.5 3001 FBgn0029992 611.4266667 14.48666667 22.18333333 0.015537432 0.655775426 0.428249437 -13 -13 -13 0.25 dme-miR-986-5p 6mer3-8 ATTCGA X 8089060 8089065 - X_8089060_8089065_- 0.873780471 0.895487286 0.884633878 0.015349025 UbcE2H FBtr0071113|FBtr0071114|FBtr0071112 8088007|8088007|8087542 8089308|8089308|8089308 X - 8089034 8089105 5'utr UbcE2H FlyBase G65632.1 ATAATTGATAAATGATAATTGGATTTTAAGATAGAAAGTGATTCGATGATGGCGTGTGATGATCAGCGCACA 28 8089063 0.795574029 9 27 191 0.96875 1.491361694 0.25 0.142857143 0.25 28 1 0 31 X:8089034-8089105 6 UbcE2H FBtr0071114|FBtr0071112|FBtr0071113 8088007|8087542|8088007 8089308|8089308|8089308 ATTCGA 6mer3-8 dme-miR-986-5p X - 8089036 8089105 5'utr UbcE2H FlyBase G49421.1 ATAATTGATAAATGATAATTGGATTTTAAGATAGAAAGTGATTCGATGATGGCGTGTGATGATCAGCGCA 26 8089063 0.952230889 8 26 174 1 1.612783857 0.170731707 0.384615385 0.609756098 26 0 0 41 X:8089036-8089105 6 24 3002 FBgn0029996 2080.593333 98.34666667 150.9166667 0.011535171 0.244034707 0.159028161 -2 -2 -2 0.25 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT X 8154902 8154907 - X_8154902_8154907_- 0.99625351 0.984890141 0.990571826 0.008035137 Traf6 FBtr0071188 8154597 8155833 X - 8154889 8154953 3'utr Traf6 FlyBase G65698.1 AAAACTAGTAATGAGTGAACCGACCAGCGCATAGAATATAAAATATGTACCTTTTTTGAAAACAA 23 8154900 0.849004415 8 22 190 0.961538462 1.096910013 0.038461538 0.086956522 0.192307692 23 0 1 25 X:8154889-8154953 6 Traf6 FBtr0071188 8154597 8155833 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" X - 8154893 8154952 3'utr Traf6 FlyBase G49467.1 AAACTAGTAATGAGTGAACCGACCAGCGCATAGAATATAAAATATGTACCTTTTTTGAAA 25 8154908 0.89132802 5 24 199 0.96969697 1.505149978 0.212121212 0.2 0.393939394 25 1 0 32 X:8154893-8154952 6 18.5 3003 FBgn0265464 124.9866667 5.45 8.333333333 0.148015788 3.394495413 2.22 -7 1 -3 0.25 dme-miR-276a-3p 7mer-A1 GTTCCTA X 8171293 8171299 - X_8171293_8171299_- 0.488624766 0.46441923 0.476521998 0.017115944 slpr FBtr0303842|FBtr0303843|FBtr0303844|FBtr0071184 8170677|8170227|8170677|8170677 8171581|8171581|8171581|8171581 X - 8171285 8171315 3'utr slpr FlyBase G65706.1 TCATAATAACCGAATTGTTCCTAACGAATGC 12 8171300 0.694288973 3 11 65 0.933333333 1.146128036 0 0.166666667 0.333333333 12 1 0 14 X:8171285-8171315 7 slpr FBtr0303842|FBtr0303843|FBtr0303844|FBtr0071184 8170677|8170227|8170677|8170677 8171581|8171581|8171581|8171581 GTTCCTA 7mer-A1 dme-miR-276a-3p X - 8171274 8171313 3'utr slpr FlyBase G49473.1 ATAATAACCGAATTGTTCCTAACGAATGCAATATGTTGTG 10 8171300 0.963992488 4 10 53 1 1.204119983 0 0.4 0.625 10 0 0 16 X:8171274-8171313 7 11 3004 FBgn0030018 811.23 18.14 27.89 0.013559656 0.606394708 0.394406597 1 1 1 0.25 dme-miR-980-3p 7mer-m8 GGCAGCT X 8239111 8239117 + X_8239111_8239117_+ 0.631314296 0.632600689 0.631957493 0.000909622 sdt FBtr0100376|FBtr0089975|FBtr0089978|FBtr0340141|FBtr0333720|FBtr0333721|FBtr0308218|FBtr0308219|FBtr0340142|FBtr0308217|FBtr0111034|FBtr0100375|FBtr0308220|FBtr0089974 8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445 8239427|8239427|8240474|8239427|8240474|8239427|8239427|8239427|8240474|8239427|8239427|8239427|8239427|8240474 X + 8239073 8239130 3'utr sdt FlyBase G59752.1 AGCGACTCCGAATGTTAACAGAGCCAGAACAATCCGTAGGCAGCTGTGCGAGGGGAGA 11 8239109 0.899253583 2 11 33 1 1.041392685 0.636363636 0 0 11 0 0 11 X:8239073-8239130 7 sdt FBtr0308220|FBtr0089974|FBtr0111034|FBtr0100375|FBtr0308219|FBtr0089975|FBtr0308217|FBtr0333720|FBtr0100376|FBtr0089978|FBtr0308218|FBtr0340141|FBtr0333721|FBtr0340142 8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445|8238445 8239427|8240474|8239427|8239427|8239427|8239427|8239427|8240474|8239427|8240474|8239427|8239427|8239427|8240474 GGCAGCT 7mer-m8 dme-miR-980-3p X + 8239092 8239144 3'utr sdt FlyBase G45177.1 AGAGCCAGAACAATCCGTAGGCAGCTGTGCGAGGGGAGATCGATCCGTCGGAT 7 8239109 0.923354171 3 7 24 1 1.113943352 0.615384615 0.714285714 0.846153846 7 0 0 13 X:8239092-8239144 7 8 3005 FBgn0261873 288.2033333 5.556666667 8.47 0.02775818 1.439712058 0.944510035 2 2 2 0.25 dme-miR-995-5p 7mer-m8 AATTCGG X 8403060 8403066 + X_8403060_8403066_+ 0.659178581 0.642460689 0.650819635 0.01182134 CG10555 FBtr0071174|FBtr0343353 8402563|8402563 8403942|8404516 X + 8402999 8403093 3'utr CG10555 FlyBase G59784.1 AGCAGCGAATTCCTCGAATTTCGAACTGAACTGTACGAAAGTTGCAGGCAGTTTTTTTTTAAATTCGGTGATAAATAGCAGAAGCAAGTAGCAGG 34 8403062 0.819490487 10 32 242 0.975 1.591064607 0.4 0.117647059 0.25 34 1 0 39 X:8402999-8403093 7 CG10555 FBtr0343353|FBtr0071174 8402563|8402563 8404516|8403942 AATTCGG 7mer-m8 dme-miR-995-5p X + 8403053 8403083 3'utr CG10555 FlyBase G45200.1 TTTTTTAAATTCGGTGATAAATAGCAGAAGC 11 8403062 0.767484927 2 10 71 0.933333333 1.146128036 0.533333333 0.363636364 0.533333333 11 1 0 14 X:8403053-8403083 7 17 3006 FBgn0030034 842.1066667 21.32333333 32.79333333 0.020187466 0.79724871 0.518398048 -2 -2 -2 0.25 dme-miR-1008-3p 6mer2-7 GCTGTG X 8408015 8408020 - X_8408015_8408020_- 0.61660251 0.796111898 0.706357204 0.126932314 lawc FBtr0071248|FBtr0302081|FBtr0307287|FBtr0307286 8408006|8408006|8408006|8408006 8409752|8409752|8409752|8409752 X - 8408008 8408041 3'utr lawc FlyBase G65738.1 TATACATAATAATAAATGATCGCTGTGTTTATGC 13 8408022 0.808062838 4 12 104 0.944444444 1.230448921 0 0.307692308 0.5 13 1 0 17 X:8408008-8408041 6 lawc FBtr0071248|FBtr0302081|FBtr0307287|FBtr0307286 8408006|8408006|8408006|8408006 8409752|8409752|8409752|8409752 GCTGTG 6mer2-7 dme-miR-1008-3p X - 8408008 8408041 3'utr lawc FlyBase G49498.1 TATACATAATAATAAATGATCGCTGTGTTTATGC 15 8408014 0.622255502 6 13 120 0.869565217 1.301029996 0 0.4 0.608695652 15 3 0 20 X:8408008-8408041 6 14 3007 FBgn0262976 211.98 11.61333333 17.8 0.066043966 1.205510907 0.786516854 2 -6 -2 0.25 dme-miR-14-3p 7mer-m8 AAGACTG X 8408092 8408098 - X_8408092_8408098_- 0.482259827 0.41704544 0.449652634 0.046113544 lawc FBtr0071248|FBtr0302081|FBtr0307287|FBtr0307286 8408006|8408006|8408006|8408006 8409752|8409752|8409752|8409752 X - 8408069 8408308 3'utr lawc FlyBase G65739.1 AATAATTTCAAGGAGAAGATGTTTTTGTGGTCAAAAACGTGCAGATGACTTCTAAGAAGTTGGAAAATCATGTATTTACTCGGAAAGAAGCCAGAACTGAAGTAGCATACTTATTAGTATTATCAAATGATGAGTTTTTTCATCATAGTTTTAGTTCTATATTTATAGAAAAAAAAAACTTTCCTTGTTACTTTTAGTTTTTTCATTTGAAAGACTGCCGTTGACTTTTTCATTTTATTC 59 8408103 0.982688276 23 56 436 0.938461538 1.785329835 0.092307692 0.101694915 0.184615385 59 4 0 61 X:8408069-8408308 7 lawc FBtr0071248|FBtr0302081|FBtr0307287|FBtr0307286 8408006|8408006|8408006|8408006 8409752|8409752|8409752|8409752 AAGACTG 7mer-m8 dme-miR-14-3p X - 8408078 8408146 3'utr lawc FlyBase G49499.1 TTATAGAAAAAAAAAACTTTCCTTGTTACTTTTAGTTTTTTCATTTGAAAGACTGCCGTTGACTTTTTC 30 8408103 0.728668305 14 29 265 0.979591837 1.681241237 0.040816327 0.466666667 0.673469388 30 1 0 48 X:8408078-8408146 7 27 3008 FBgn0262976 211.98 11.61333333 17.8 0.127370507 2.324913892 1.516853933 5 5 5 0.25 dme-miR-263a-5p 6mer3-8 GTGCCA X 8429129 8429134 + X_8429129_8429134_+ 0.957539287 0.992574311 0.975056799 0.024773486 Trf2 FBtr0300577|FBtr0330106|FBtr0333811|FBtr0330105|FBtr0112927|FBtr0333750 8429114|8429114|8429114|8429114|8429114|8429114 8433011|8433011|8430195|8430195|8430195|8430195 X + 8429030 8429141 stop_codon Trf2 FlyBase G59811.1 AACAGACCAGCTTCTCGCCCAGCGAATTCGATGTTGATGACTTGATCGAGGAGGAGGAGAACAACGAATTGGATATGCCCTTCTAAGCTAGCGCTGCCCGTGCCAAAAAAAA 13 8429129 0.952630486 10 13 62 1 1.146128036 0.142857143 0.076923077 0.142857143 13 0 0 14 X:8429030-8429141 6 Trf2 FBtr0112927|FBtr0333750|FBtr0300577|FBtr0330106|FBtr0333811|FBtr0330105 8429114|8429114|8429114|8429114|8429114|8429114 8430195|8430195|8433011|8433011|8430195|8430195 GTGCCA 6mer3-8 dme-miR-263a-5p X + 8429097 8429144 stop_codon Trf2 FlyBase G45213.1 ATTGGATATGCCCTTCTAAGCTAGCGCTGCCCGTGCCAAAAAAAAATT 6 8429127 0.906291225 3 5 22 1 0.954242509 0 0.8 0.888888889 5 0 0 9 X:8429097-8429144 6 5.5 3009 FBgn0261793 2407.63 30.94 47.70333333 0.002284404 0.177763413 0.115295926 0 2 1 0.25 dme-miR-276a-3p 6mer2-7 GTTCCT X 8430443 8430448 + X_8430443_8430448_+ 0.641067907 0.62569685 0.633382379 0.010869009 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 X + 8430418 8430462 3'utr Trf2 FlyBase G59822.1 CGCTTAAGTGTAGATTTACAAACTTGTTCCTGTGTTGTTAAAATC 189 8430443 0.745467116 12 184 2059 0.976851852 1.625312451 0.162037037 0.121693122 0.231481481 189 1 4 211 X:8430418-8430462 6 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 GTTCCT 6mer2-7 dme-miR-276a-3p X + 8430419 8430466 3'utr Trf2 FlyBase G45223.1 GCTTAAGTGTAGATTTACAAACTTGTTCCTGTGTTGTTAAAATCAGAA 121 8430442 0.76049186 9 115 1286 0.947916667 1.561101384 0.135416667 0.41322314 0.630208333 121 6 4 182 X:8430419-8430466 6 153.5 3010 FBgn0261793 2407.63 30.94 47.70333333 0.063755644 4.961215255 3.217804486 0 1 0.5 0.25 dme-miR-14-3p 7mer-m8 AAGACTG X 8431992 8431998 + X_8431992_8431998_+ 0.671103147 0.668607035 0.669855091 0.001765009 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 X + 8431959 8432106 3'utr Trf2 FlyBase G59829.1 CAAATAGCATAATTCTGTTTTTGTTTTGCCGTAAAGACTGCATTATACCAACAATTAATTATATACAAACATAATAAATAATTAACTGATAAATGGGGCGAGTAAGCTTTGCAACTAAGCTGAGAACAAAACGGATGGATAAACATTT 73 8432001 0.981840352 17 71 510 0.965116279 1.919078092 0.023255814 0.164383562 0.290697674 73 3 0 83 X:8431959-8432106 7 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 AAGACTG 7mer-m8 dme-miR-14-3p X + 8431961 8432014 3'utr Trf2 FlyBase G45229.1 AATAGCATAATTCTGTTTTTGTTTTGCCGTAAAGACTGCATTATACCAACAATT 42 8432001 0.970298474 12 41 314 0.982758621 1.755874856 0 0.30952381 0.5 42 1 0 57 X:8431961-8432014 7 51 3011 FBgn0261793 2407.63 30.94 47.70333333 0.021182657 1.648351648 1.069107679 -9 -9 -9 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 8432299 8432304 + X_8432299_8432304_+ 0.975702857 0.913232761 0.944467809 0.044173031 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 X + 8432277 8432319 3'utr Trf2 FlyBase G59831.1 AAAAGCAAGATGAAATTACCTTACCAAAATGTGCTAGCCCTCG 5 8432293 0.886551134 3 5 27 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 X:8432277-8432319 6 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 8432274 8432320 3'utr Trf2 FlyBase G45230.1 ACGAAAAGCAAGATGAAATTACCTTACCAAAATGTGCTAGCCCTCGA 6 8432306 0.973596674 3 6 38 1 0.903089987 0.375 0.333333333 0.5 6 0 0 8 X:8432274-8432320 6 5.5 3012 FBgn0261793 2407.63 30.94 47.70333333 0.002284404 0.177763413 0.115295926 6 -7 -0.5 0.25 dme-miR-277-3p 6mer3-8 TGCATT X 8441353 8441358 - X_8441353_8441358_- 0.769036553 0.859828076 0.814432315 0.064199285 CG12123 FBtr0071245 8441245 8441410 X - 8441336 8441371 3'utr CG12123 FlyBase G65747.1 AAAAATTGTAAATTGCATTAGGTGGTCACGATTCGA 5 8441355 0.878273102 4 5 30 1 0.84509804 0.142857143 0.4 0.571428571 5 0 0 7 X:8441336-8441371 6 CG12123 FBtr0071245 8441245 8441410 TGCATT 6mer3-8 dme-miR-277-3p X - 8441341 8441370 3'utr CG12123 FlyBase G49507.1 AAAATTGTAAATTGCATTAGGTGGTCACGA 7 8441358 0.681940397 4 6 47 0.916666667 1.041392685 0 0.571428571 0.75 7 1 0 11 X:8441341-8441370 6 6 3013 FBgn0030039 53.33333333 6.263333333 9.543333333 0.1125 0.95795636 0.628711142 -3 0 -1.5 0.25 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 8448086 8448092 - X_8448086_8448092_- 0.581938438 0.720579608 0.651259023 0.098034133 org-1 FBtr0345983|FBtr0071244 8447689|8447839 8448232|8448232 X - 8448064 8448106 3'utr org-1 FlyBase G65752.1 GTGTAAATCTCATGCCAAAGATTCGTTCTAAAATCAAGAATCT 11 8448094 0.944310903 2 9 79 0.833333333 1 0.25 0.090909091 0.166666667 11 2 0 10 X:8448064-8448106 7 org-1 FBtr0071244|FBtr0345983 8447839|8447689 8448232|8448232 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X - 8448074 8448108 3'utr org-1 FlyBase G49509.1 ATGTGTAAATCTCATGCCAAAGATTCGTTCTAAAA 8 8448094 0.854662071 2 7 47 0.916666667 1.041392685 0.166666667 0.5 0.666666667 8 1 0 11 X:8448074-8448108 7 9.5 3014 FBgn0021767 5 0.183333333 0.283333333 1.9 51.81818182 33.52941176 2 2 2 0.25 dme-miR-283-5p 8mer-A1 TGATATTA X 8558901 8558908 - X_8558901_8558908_- 0.585321087 0.592191037 0.588756062 0.004857753 CG12112 FBtr0071233|FBtr0331727 8558877|8558877 8559220|8559220 X - 8558884 8558930 3'utr CG12112 FlyBase G65765.1 AATATAATTATTAAATGCCTGGTGATATTAGCATTATCACTCTTGTG 42 8558903 0.646701988 7 40 325 0.945454545 1.716003344 0.018181818 0.261904762 0.436363636 42 3 0 52 X:8558884-8558930 8 CG12112 FBtr0331727|FBtr0071233 8558877|8558877 8559220|8559220 TGATATTA 8mer-A1 dme-miR-283-5p X - 8558883 8558935 3'utr CG12112 FlyBase G49515.1 AAAATAATATAATTATTAAATGCCTGGTGATATTAGCATTATCACTCTTGTGA 28 8558902 0.662221473 8 27 228 1 1.602059991 0 0.285714286 0.5 28 0 0 40 X:8558883-8558935 8 34.5 3015 FBgn0030048 960.5366667 106.9333333 163.9633333 0.035917421 0.322630923 0.210412897 -5 -6 -5.5 0.25 dme-miR-263a-5p 7mer-A1 TGCCATA X 8567613 8567619 + X_8567613_8567619_+ 0.749373918 0.772988777 0.761181347 0.016698256 Trf4-1 FBtr0112964|FBtr0331725 8566937|8566937 8570159|8570159 X + 8567583 8567624 3'utr Trf4-1 FlyBase G59860.1 CGTAACTAATTCCCTATCCACCCCATTTCCTGCCATACAAAA 24 8567609 0.722021287 3 24 138 1 1.531478917 0 0.375 0.558823529 24 0 0 34 X:8567583-8567624 7 Trf4-1 FBtr0331725|FBtr0112964 8566937|8566937 8570159|8570159 TGCCATA 7mer-A1 dme-miR-263a-5p X + 8567581 8567631 3'utr Trf4-1 FlyBase G45249.1 AACGTAACTAATTCCCTATCCACCCCATTTCCTGCCATACAAAAAAAAAAA 13 8567609 0.964592749 4 13 68 1 1.255272505 0 0.307692308 0.5 13 0 0 18 X:8567581-8567631 7 17.5 3016 FBgn0030049 670.8133333 17.65 27.06666667 0.026087734 0.991501416 0.646551724 4 4 4 0.25 dme-miR-980-5p 7mer-m1 AAAAACT X 8567795 8567801 + X_8567795_8567801_+ 0.758553527 0.740425164 0.749489346 0.012818644 Trf4-1 FBtr0112964|FBtr0331725 8566937|8566937 8570159|8570159 X + 8567771 8567808 3'utr Trf4-1 FlyBase G59861.1 TGCGCAATGACCCTTGTAACTTCCAAAAACTCGTTTAA 10 8567789 0.651641957 4 10 61 1 1 0.1 0 0 10 0 0 10 X:8567771-8567808 7 Trf4-1 FBtr0331725|FBtr0112964 8566937|8566937 8570159|8570159 AAAAACT 7mer-m1 dme-miR-980-5p X + 8567777 8567804 3'utr Trf4-1 FlyBase G45250.1 ATGACCCTTGTAACTTCCAAAAACTCGT 6 8567789 0.654332315 2 6 32 1 1.041392685 0 0.833333333 0.909090909 6 0 0 11 X:8567777-8567804 7 8 3017 FBgn0030049 670.8133333 17.65 27.06666667 0.011925821 0.45325779 0.295566502 6 6 6 0.25 dme-miR-317-3p 6mer3-8 TGTGTT X 8567994 8567999 + X_8567994_8567999_+ 0.566016831 0.997930253 0.781973542 0.305408965 Trf4-1 FBtr0112964|FBtr0331725 8566937|8566937 8570159|8570159 X + 8567927 8568013 3'utr Trf4-1 FlyBase G59863.1 AATTAAGGTAAAAAAAATTGTGAGCCTACTTAAATTGTTCGAACACATTGTCCAACCCCAAAGCAATTGTGTTTTAAAGCTAAAACA 32 8567993 0.85903393 10 32 186 1 1.556302501 0.055555556 0.125 0.222222222 32 0 0 36 X:8567927-8568013 6 Trf4-1 FBtr0331725|FBtr0112964 8566937|8566937 8570159|8570159 TGTGTT 6mer3-8 dme-miR-317-3p X + 8567923 8568011 3'utr Trf4-1 FlyBase G45252.1 TTATAATTAAGGTAAAAAAAATTGTGAGCCTACTTAAATTGTTCGAACACATTGTCCAACCCCAAAGCAATTGTGTTTTAAAGCTAAAA 20 8567994 0.950491038 7 18 119 0.923076923 1.380211242 0.384615385 0.25 0.423076923 20 2 0 24 X:8567923-8568011 6 13.5 3018 FBgn0030049 670.8133333 17.65 27.06666667 0.020124824 0.764872521 0.498768473 1 0 0.5 0.25 dme-miR-263a-5p 7mer-m1 TGCCATT X 8568162 8568168 + X_8568162_8568168_+ 0.691473809 0.695503855 0.693488832 0.002849711 Trf4-1 FBtr0112964|FBtr0331725 8566937|8566937 8570159|8570159 X + 8568139 8568183 3'utr Trf4-1 FlyBase G59864.1 GTTGTGCATTTTGCATAGATTCCTGCCATTTGTTTGTATAGTTGT 137 8568158 0.835097401 4 134 1343 0.988636364 2.240549248 0.477272727 0.240875912 0.409090909 137 2 0 174 X:8568139-8568183 7 Trf4-1 FBtr0331725|FBtr0112964 8566937|8566937 8570159|8570159 TGCCATT 7mer-m1 dme-miR-263a-5p X + 8568138 8568187 3'utr Trf4-1 FlyBase G45253.1 TGTTGTGCATTTTGCATAGATTCCTGCCATTTGTTTGTATAGTTGTTCAC 83 8568158 0.830157771 4 82 791 0.992248062 2.10720997 0.457364341 0.385542169 0.604651163 83 1 0 128 X:8568138-8568187 7 109.5 3019 FBgn0030049 670.8133333 17.65 27.06666667 0.16323468 6.203966006 4.045566502 4 4 4 0.25 dme-bantam-3p 7mer-m8 TGATCTC X 8591045 8591051 - X_8591045_8591051_- 0.360440905 0.548283837 0.454362371 0.132824988 CG12659 FBtr0332627 8590773 8591302 X - 8590979 8591089 3'utr CG12659 FlyBase G65774.1 ATATATATATATATATGCATACACTGCCTAAAAGGAGATGATCTCTGTAAATTAGTTATAGAGATTTGTCACTAGTTTGACCGCAAAAATAGATTAGGTAATTCCAAGGTG 54 8591051 0.985209668 9 52 420 0.966666667 1.286306739 0.05 0.092592593 0.183333333 54 0 2 58 X:8590979-8591089 7 CG12659 FBtr0332627 8590773 8591302 TGATCTC 7mer-m8 dme-bantam-3p X - 8591024 8591095 3'utr CG12659 FlyBase G49523.1 ATTACCATATATATATATATATGCATACACTGCCTAAAAGGAGATGATCTCTGTAAATTAGTTATAGAGATT 32 8591044 0.793825522 9 30 240 0.906976744 1.591064607 0.046511628 0.15625 0.372093023 32 4 0 39 X:8591024-8591095 7 17.5 3020 FBgn0040929 86.03333333 12.17 18.70333333 0.203409531 1.437962202 0.935662092 0 -7 -3.5 0.25 dme-miR-34-5p 7mer-m8 CACTGCC X 8591062 8591068 - X_8591062_8591068_- 0.678563129 0.658675374 0.668619252 0.014062728 CG12659 FBtr0332627 8590773 8591302 X - 8590979 8591089 3'utr CG12659 FlyBase G65774.1 ATATATATATATATATGCATACACTGCCTAAAAGGAGATGATCTCTGTAAATTAGTTATAGAGATTTGTCACTAGTTTGACCGCAAAAATAGATTAGGTAATTCCAAGGTG 54 8591051 0.985209668 9 52 420 0.966666667 1.286306739 0.05 0.092592593 0.183333333 54 0 2 58 X:8590979-8591089 7 CG12659 FBtr0332627 8590773 8591302 CACTGCC 7mer-m8 dme-miR-34-5p X - 8591024 8591095 3'utr CG12659 FlyBase G49523.1 ATTACCATATATATATATATATGCATACACTGCCTAAAAGGAGATGATCTCTGTAAATTAGTTATAGAGATT 32 8591044 0.793825522 9 30 240 0.906976744 1.591064607 0.046511628 0.15625 0.372093023 32 4 0 39 X:8591024-8591095 7 13.5 3021 FBgn0040929 86.03333333 12.17 18.70333333 0.156915924 1.109285127 0.721796471 -17 -24 -20.5 0.25 dme-bantam-3p 6mer3-8 TGATCT X 8601159 8601164 + X_8601159_8601164_+ 0.929194973 0.985816008 0.95750549 0.040037093 Crag FBtr0343356|FBtr0071219|FBtr0071220 8600627|8600627|8600627 8602036|8601231|8601231 X + 8601145 8601192 3'utr Crag FlyBase G59913.1 TTTTGTAAATGACTTGATCTTAACATTTAAGTACTTAACGATTTTTCG 14 8601161 0.986132383 6 12 123 0.894736842 1.230448921 0.052631579 0.357142857 0.526315789 14 2 0 17 X:8601145-8601192 6 Crag FBtr0343356|FBtr0071219|FBtr0071220 8600627|8600627|8600627 8602036|8601231|8601231 TGATCT 6mer3-8 dme-bantam-3p X + 8601083 8601177 3'utr Crag FlyBase G45290.1 CGAACTTTCCTAAGTGAAAGCCCCAACTTGACATGTGTTGCATTGTGAAAACATGCAAATGATTTTGTAAATGACTTGATCTTAACATTTAAGTA 12 8601159 0.986541982 9 12 92 1 1.255272505 0.055555556 0.333333333 0.555555556 12 0 0 18 X:8601083-8601177 6 9 3022 FBgn0025864 2284.02 39.50333333 60.84 0.003940421 0.227828875 0.147928994 -2 0 -1 0.25 dme-miR-305-5p 7mer-A1 GTACAAA X 8712521 8712527 - X_8712521_8712527_- 0.678070462 0.611515501 0.644792982 0.047061492 CG2004 FBtr0332958|FBtr0071281|FBtr0332960|FBtr0346167|FBtr0332957 8712470|8712470|8712470|8712470|8712470 8712597|8712597|8712597|8712597|8712597 X - 8712500 8712542 3'utr CG2004 FlyBase G65795.1 TGTAACCCATATAATGTACAAAACGTAACTCCAGATAATTAAA 7 8712528 0.945332781 3 7 34 1 0.954242509 0.111111111 0.142857143 0.333333333 7 0 0 9 X:8712500-8712542 7 CG2004 FBtr0332957|FBtr0332960|FBtr0346167|FBtr0332958|FBtr0071281 8712470|8712470|8712470|8712470|8712470 8712597|8712597|8712597|8712597|8712597 GTACAAA 7mer-A1 dme-miR-305-5p X - 8712512 8712539 3'utr CG2004 FlyBase G49537.1 AACCCATATAATGTACAAAACGTAACTC 5 8712528 0.657908897 2 5 20 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 X:8712512-8712539 7 6 3023 FBgn0030060 282.3166667 21.61333333 33.1 0.02125273 0.277606416 0.181268882 1 1 1 0.25 dme-miR-277-3p 7mer-m8 TGCATTT X 8873294 8873300 - X_8873294_8873300_- 0.615278554 0.612981948 0.614130251 0.001624012 Moe FBtr0331601|FBtr0071269|FBtr0308193|FBtr0071274 8873010|8873010|8873010|8873010 8873946|8873946|8873946|8873946 X - 8873257 8873322 3'utr Moe FlyBase G65821.1 TACAACAAAACAAACAACTATTTGCATTTTCCCCCGTTATAATTATTATTTTTATTATTATATAAT 85 8873301 0.984996478 6 81 669 0.971153846 2.004321374 0 0.188235294 0.336538462 85 3 0 101 X:8873257-8873322 7 Moe FBtr0308193|FBtr0071274|FBtr0331601|FBtr0071269 8873010|8873010|8873010|8873010 8873946|8873946|8873946|8873946 TGCATTT 7mer-m8 dme-miR-277-3p X - 8873276 8873315 3'utr Moe FlyBase G49552.1 AAACAAACAACTATTTGCATTTTCCCCCGTTATAATTATT 50 8873301 0.70646742 4 48 401 0.971428571 1.531478917 0 0.34 0.528571429 50 1 1 68 X:8873276-8873315 7 65.5 3024 FBgn0011661 40921.94667 1697.71 2611.596667 0.001600608 0.038581383 0.025080442 1 1 1 0.25 dme-miR-307a-3p 8mer-A1 GGTTGTGA X 8898980 8898987 - X_8898980_8898987_- 0.674316096 0.674025488 0.674170792 0.000205485 CG1885 FBtr0333606 8898552 8899226 X - 8898956 8899006 3'utr CG1885 FlyBase G65841.1 GTAGAAAATTTCGAGCTTTGGTTGTGATTCGATTCGATTGATTAGTTATCT 58 8898988 0.708201864 8 57 580 0.986111111 1.851258349 0.277777778 0.206896552 0.361111111 58 1 0 71 X:8898956-8899006 8 CG1885 FBtr0333606 8898552 8899226 GGTTGTGA 8mer-A1 dme-miR-307a-3p X - 8898952 8899007 3'utr CG1885 FlyBase G49569.1 TGTAGAAAATTTCGAGCTTTGGTTGTGATTCGATTCGATTGATTAGTTATCTTTAT 37 8898988 0.960006183 7 35 361 0.9375 1.352182518 0.208333333 0.297297297 0.458333333 37 2 1 45 X:8898952-8899007 8 47 3025 FBgn0030066 139.3333333 11.45 17.55333333 0.337320574 4.104803493 2.677554121 1 1 1 0.25 dme-miR-965-3p 7mer-A1 ACGCTTA X 8903415 8903421 + X_8903415_8903421_+ 0.816465468 0.817253375 0.816859421 0.000557129 Rbm13 FBtr0346163|FBtr0071255 8903356|8903356 8903761|8903464 X + 8903403 8903441 3'utr Rbm13 FlyBase G59960.1 ACTTAGCTGTTAACGCTTATTGTTTAGCCGGTTAAGAAT 14 8903422 0.655924092 5 13 135 0.944444444 1.230448921 0.333333333 0.214285714 0.388888889 14 1 0 17 X:8903403-8903441 7 Rbm13 FBtr0071255|FBtr0346163 8903356|8903356 8903464|8903761 ACGCTTA 7mer-A1 dme-miR-965-3p X + 8903403 8903439 3'utr Rbm13 FlyBase G45332.1 ACTTAGCTGTTAACGCTTATTGTTTAGCCGGTTAAGA 12 8903423 0.616219647 5 11 110 0.875 1.146128036 0.25 0.25 0.4375 12 2 0 14 X:8903403-8903439 7 12.5 3026 FBgn0030067 1128.99 111.6733333 171.8733333 0.011071843 0.111933616 0.072727978 -7 -8 -7.5 0.25 dme-miR-317-3p 8mer-A1 TGTGTTCA X 8973005 8973012 - X_8973005_8973012_- 0.54419848 0.575295318 0.559746899 0.021988758 CG10962 FBtr0071263 8972906 8973203 X - 8973000 8973034 3'utr CG10962 FlyBase G65851.1 CGTTTCGTTTTATTTTTATTATTGTGTTCAGTTAC 50 8973013 0.766576934 3 49 665 0.984615385 1.806179974 0.030769231 0.24 0.415384615 50 1 0 64 X:8973000-8973034 8 CG10962 FBtr0071263 8972906 8973203 TGTGTTCA 8mer-A1 dme-miR-317-3p X - 8973000 8973050 3'utr CG10962 FlyBase G49578.1 CTGTTGGCACTCACCTCGTTTCGTTTTATTTTTATTATTGTGTTCAGTTAC 67 8973013 0.75951168 8 64 872 0.947916667 1.180890142 0.197916667 0.343283582 0.541666667 67 0 5 91 X:8973000-8973050 8 55.5 3027 FBgn0030073 904.93 102.5533333 154.9166667 0.061330711 0.541181824 0.358257127 1 1 1 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 9085739 9085745 + X_9085739_9085745_+ 0.791584798 0.795234535 0.793409667 0.002580728 APC4 FBtr0071285|FBtr0071285|FBtr0071285|FBtr0309872|FBtr0309872|FBtr0309872 9085700|9085700|9085700|9085700|9085700|9085700 9085867|9085867|9085867|9085867|9085867|9085867 X + 9085728 9085750 3'utr APC4 FlyBase G59975.1 ATTGATTGTTGTGTGATAACTTA 9 9085736 0.697389284 3 8 82 0.9375 0.875061263 0 0.444444444 0.6875 9 0 1 15 X:9085728-9085750 7 APC4 FBtr0071285|FBtr0071285|FBtr0071285|FBtr0309872|FBtr0309872|FBtr0309872 9085700|9085700|9085700|9085700|9085700|9085700 9085867|9085867|9085867|9085867|9085867|9085867 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X + 9085727 9085751 3'utr APC4 FlyBase G45344.1 TATTGATTGTTGTGTGATAACTTAA 9 9085737 0.660400306 4 9 81 1 1.176091259 0 0.555555556 0.733333333 9 0 0 15 X:9085727-9085751 7 9 3028 FBgn0052707 194.3333333 9.046666667 13.88 0.046312178 0.994841562 0.648414986 3 2 2.5 0.25 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA X 9088039 9088045 + X_9088039_9088045_+ 0.578744345 0.778965243 0.678854794 0.141577556 CG32706 FBtr0071287 9088008 9088073 X + 9088023 9088049 3'utr CG32706 FlyBase G59979.1 CTTTGCTTCCAATGTCTACCTGACTGC 5 9088036 0.707473925 2 2 28 0.666666667 0.602059991 0.166666667 0.2 0.333333333 5 2 0 4 X:9088023-9088049 7 CG32706 FBtr0071287 9088008 9088073 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" X + 9088018 9088051 3'utr CG32706 FlyBase G45348.1 TAGACCTTTGCTTCCAATGTCTACCTGACTGCAA 5 9088037 0.931568935 3 5 35 1 0.698970004 0.2 0 0 5 0 0 5 X:9088018-9088051 7 4.5 3029 FBgn0052706 14.77333333 2.05 3.03 0.304602888 2.195121951 1.485148515 3 2 2.5 0.25 dme-miR-980-3p 8mer-A1 GGCAGCTA X 9093750 9093757 - X_9093750_9093757_- 0.648355583 0.652158618 0.6502571 0.002689127 CG7766 FBtr0114594|FBtr0309250|FBtr0343319|FBtr0071351|FBtr0071352|FBtr0114595|FBtr0309251 9093610|9093610|9093610|9093610|9093610|9093610|9093610 9094242|9094242|9094242|9094242|9094242|9094242|9094242 X - 9093721 9093895 3'utr CG7766 FlyBase G65868.1 TGTACGTATGTGTTGAGACCTTGGAAAGATACTCCAAAACTGCACCCAAAAAACCGATCCTAACCCCGCCACACCACCCAGCCAATCCATTTAGTAAGCCAACCCATGCTGCTCGGATACAGATTTGTTTTTTGTACTGGCAGCTATTTTACAGCGACAACACTTTCGATTGTTT 47 9093758 0.987847864 16 45 396 0.961538462 1.698970004 0.153846154 0.106382979 0.192307692 47 2 0 50 X:9093721-9093895 8 CG7766 FBtr0114595|FBtr0309251|FBtr0071351|FBtr0071352|FBtr0309250|FBtr0343319|FBtr0114594 9093610|9093610|9093610|9093610|9093610|9093610|9093610 9094242|9094242|9094242|9094242|9094242|9094242|9094242 GGCAGCTA 8mer-A1 dme-miR-980-3p X - 9093715 9093775 3'utr CG7766 FlyBase G49592.1 AGATTTGTTTTTTGTACTGGCAGCTATTTTACAGCGACAACACTTTCGATTGTTTTAACTT 26 9093758 0.880291063 5 25 244 0.945945946 1.544068044 0.054054054 0.307692308 0.513513514 26 2 0 35 X:9093715-9093775 8 29 3030 FBgn0030087 549.9233333 13.47666667 20.56666667 0.052734624 2.151867425 1.410048622 1 1 1 0.25 dme-miR-2a-2-5p 8mer-A1 TGATGAGA X 9117456 9117463 + X_9117456_9117463_+ 0.594124534 0.599042659 0.596583597 0.003477693 AP-1gamma FBtr0071298|FBtr0071294|FBtr0112965|FBtr0333808|FBtr0309254|FBtr0071296|FBtr0071297|FBtr0071295|FBtr0309255 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117739|9117739|9117739|9117741|9117741|9117739|9117739|9117739|9117744 X + 9117418 9117507 5'utr AP-1gamma FlyBase G60018.1 TTAGTTGCCGTCGCCGAGATGAGATGAGATGATGATGATGATGAGACGATGGATATGGAAATGACGATGATGATGATGGGGGGCATCGAG 17 9117467 0.861172467 8 15 74 0.833333333 1.176091259 0.5 0.058823529 0.111111111 17 3 0 15 X:9117418-9117507 8 AP-1gamma FBtr0333808|FBtr0112965|FBtr0071294|FBtr0071298|FBtr0071295|FBtr0309255|FBtr0071297|FBtr0071296|FBtr0309254 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117741|9117739|9117739|9117739|9117739|9117744|9117739|9117739|9117741 TGATGAGA 8mer-A1 dme-miR-2a-2-5p X + 9117388 9117486 5'utr AP-1gamma FlyBase G45382.1 GGACGCAGCTTAGAACTATATATTAACTGATTAGTTGCCGTCGCCGAGATGAGATGAGATGATGATGATGATGAGACGATGGATATGGAAATGACGATG 12 9117459 0.965962931 6 11 63 1 1.255272505 0.555555556 0.333333333 0.555555556 12 0 0 18 X:9117388-9117486 8 8 3031 FBgn0030089 1732.843333 43.93 67.95333333 0.00461669 0.182107899 0.117727852 -11 -3 -7 0.25 dme-miR-980-3p 6mer2-7 GCAGCT X 9117570 9117575 + X_9117570_9117575_+ 0.903481181 0.845868257 0.874674719 0.040738472 AP-1gamma FBtr0071298|FBtr0071294|FBtr0112965|FBtr0333808|FBtr0309254|FBtr0071296|FBtr0071297|FBtr0071295|FBtr0309255 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117739|9117739|9117739|9117741|9117741|9117739|9117739|9117739|9117744 X + 9117547 9117627 5'utr AP-1gamma FlyBase G60019.1 TATTACGATTATAAATGAATTGCGCAGCTGTATGAGAAGGAAAGAGAGGGAGAGAGATAAGAAAATAATAACATTAACATA 78 9117567 0.91955567 9 71 297 0.925531915 1.337459261 0.319148936 0.153846154 0.29787234 78 4 3 87 X:9117547-9117627 6 AP-1gamma FBtr0333808|FBtr0112965|FBtr0071294|FBtr0071298|FBtr0071295|FBtr0309255|FBtr0071297|FBtr0071296|FBtr0309254 9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261|9116261 9117741|9117739|9117739|9117739|9117739|9117744|9117739|9117739|9117741 GCAGCT 6mer2-7 dme-miR-980-3p X + 9117553 9117628 5'utr AP-1gamma FlyBase G45383.1 GATTATAAATGAATTGCGCAGCTGTATGAGAAGGAAAGAGAGGGAGAGAGATAAGAAAATAATAACATTAACATAT 48 9117567 0.884982527 8 45 167 0.931506849 1.832508913 0.328767123 0.416666667 0.616438356 48 5 0 68 X:9117553-9117628 6 32 3032 FBgn0030089 1732.843333 43.93 67.95333333 0.018466759 0.728431596 0.47091141 3 3 3 0.25 dme-miR-1008-3p 6mer3-8 AGCTGT X 9151749 9151754 + X_9151749_9151754_+ 0.851394037 0.997884975 0.924639506 0.103584779 dalao FBtr0071300 9151671 9151976 X + 9151718 9151802 3'utr dalao FlyBase G60039.1 ATATATGAATCGATCCCTGGTGTTGTAACATAGCTGTCCCCTCCCGGAACTTCCGGAAGGCAAACAACCGGAATGCTCTTAACTT 26 9151748 0.946513453 9 23 153 0.85 1.531478917 0.1 0.384615385 0.6 26 6 0 34 X:9151718-9151802 6 dalao FBtr0071300 9151671 9151976 AGCTGT 6mer3-8 dme-miR-1008-3p X + 9151723 9151768 3'utr dalao FlyBase G45394.1 TGAATCGATCCCTGGTGTTGTAACATAGCTGTCCCCTCCCGGAACT 5 9151740 0.984429879 4 4 29 0.5 0.602059991 0.125 0.2 0.5 5 4 0 4 X:9151723-9151768 6 9 3033 FBgn0030093 788.6633333 35.47 53.86 0.011411713 0.253735551 0.167099889 1 9 5 0.25 dme-miR-277-3p 7mer-m8 TGCATTT X 9153073 9153079 - X_9153073_9153079_- 0.616317368 0.616699501 0.616508435 0.000270186 His3.3B FBtr0340343 9152521 9154111 X - 9152946 9153138 3'utr His3.3B FlyBase G65891.1 ACATAACGAAGGGATGGGCGTGACAGAGTTAGTTGATTAAATAAGATTTTAGATTTACATGCATTTTATACGTTTAGGCGGACGATAGAAGATGATTCTTCTTCGGGAGATGAAAAAAAGATATAAAGATGATTCAGCAATCAGATTAACTTACACATCTATAGATTTGGAAGAGCATCGAATAAAAATAACC 172 9153073 0.848434979 32 152 1447 0.905472637 1.658011397 0.164179104 0.156976744 0.278606965 172 16 3 182 X:9152946-9153138 7 His3.3B FBtr0340343 9152521 9154111 TGCATTT 7mer-m8 dme-miR-277-3p X - 9152949 9153134 3'utr His3.3B FlyBase G49612.1 AACGAAGGGATGGGCGTGACAGAGTTAGTTGATTAAATAAGATTTTAGATTTACATGCATTTTATACGTTTAGGCGGACGATAGAAGATGATTCTTCTTCGGGAGATGAAAAAAAGATATAAAGATGATTCAGCAATCAGATTAACTTACACATCTATAGATTTGGAAGAGCATCGAATAAAAATA 117 9153073 0.803406756 34 98 925 0.847058824 1.857332496 0.147058824 0.367521368 0.564705882 117 25 1 144 X:9152949-9153134 7 92.5 3034 FBgn0004828 21818.69667 1276.286667 1948.03 0.004239483 0.072475881 0.047483868 -6 -6 -6 0.25 dme-bantam-3p 7mer-m8 TGATCTC X 9171625 9171631 + X_9171625_9171631_+ 0.660431803 0.659171027 0.659801415 0.00089152 mei-P26 FBtr0333474|FBtr0333473|FBtr0333475 9170814|9170814|9170814 9189309|9189309|9175190 X + 9171581 9171657 3'utr mei-P26 FlyBase G60057.1 AAACCAATAACAGATGATAAACAAAATGCAACAAATACTATTTTTGATCTCTAATTTAAAAACAATTAGCGCTACTA 115 9171624 0.99202655 14 111 1231 0.965034965 1.838849091 0 0.2 0.356643357 115 4 1 138 X:9171581-9171657 7 mei-P26 FBtr0071303|FBtr0340341|FBtr0333475|FBtr0333473|FBtr0333474 9170814|9170814|9170814|9170814|9170814 9171659|9171659|9175190|9189309|9189309 TGATCTC 7mer-m8 dme-bantam-3p X + 9171604 9171643 3'utr mei-P26 FlyBase G45407.1 AAATGCAACAAATACTATTTTTGATCTCTAATTTAAAAAC 79 9171623 0.618583064 11 76 862 0.963636364 2.025305865 0 0.316455696 0.509090909 79 4 0 106 X:9171604-9171643 7 95 3035 FBgn0026206 3669.783333 46.77 72.34333333 0.025887087 2.031216592 1.313182509 1 2 1.5 0.25 dme-miR-965-3p 6mer3-8 TACGCT X 9172294 9172299 + X_9172294_9172299_+ 0.680833256 0.970532762 0.825683009 0.204848481 mei-P26 FBtr0333474|FBtr0333473|FBtr0333475 9170814|9170814|9170814 9189309|9189309|9175190 X + 9172261 9172338 3'utr mei-P26 FlyBase G60060.1 CAGAAAATAACAAAAACTGTTTAGGTTTTTCCTTACGCTGCTTATATAAGGTGATATCTATTTATATATAAATCTATA 28 9172307 0.989789074 10 28 276 1 1.491361694 0.064516129 0.071428571 0.161290323 28 0 0 31 X:9172261-9172338 6 mei-P26 FBtr0333475|FBtr0333473|FBtr0333474 9170814|9170814|9170814 9175190|9189309|9189309 TACGCT 6mer3-8 dme-miR-965-3p X + 9172282 9172328 3'utr mei-P26 FlyBase G45409.1 TAGGTTTTTCCTTACGCTGCTTATATAAGGTGATATCTATTTATATA 13 9172294 0.789784295 6 12 129 0.95 1.278753601 0 0.307692308 0.55 13 1 0 19 X:9172282-9172328 6 14 3036 FBgn0026206 3669.783333 46.77 72.34333333 0.003814939 0.299337182 0.193521633 -13 0 -6.5 0.25 dme-miR-263a-5p 7mer-A1 TGCCATA X 9172415 9172421 + X_9172415_9172421_+ 0.782682945 0.777921507 0.780302226 0.003366818 mei-P26 FBtr0333474|FBtr0333473|FBtr0333475 9170814|9170814|9170814 9189309|9189309|9175190 X + 9172382 9172434 3'utr mei-P26 FlyBase G60061.1 ACATATATGTGAAATCCTATGACTATATGACTTTGCCATATAATATACAAAGC 12 9172413 0.992123385 6 8 96 0.714285714 1 0.071428571 0.083333333 0.214285714 12 4 0 10 X:9172382-9172434 7 mei-P26 FBtr0333475|FBtr0333473|FBtr0333474 9170814|9170814|9170814 9175190|9189309|9189309 TGCCATA 7mer-A1 dme-miR-263a-5p X + 9172371 9172430 3'utr mei-P26 FlyBase G45410.1 ATATATCTTAAACATATATGTGAAATCCTATGACTATATGACTTTGCCATATAATATACA 12 9172414 0.986068155 8 10 88 0.8125 0.812913357 0.125 0.333333333 0.5 12 2 1 13 X:9172371-9172430 7 7.5 3037 FBgn0026206 3669.783333 46.77 72.34333333 0.002043717 0.160359205 0.103672303 2 1 1.5 0.25 dme-miR-283-5p 6mer3-8 TGATAT X 9173482 9173487 + X_9173482_9173487_+ 0.781612215 0.46723333 0.624422773 0.222299452 mei-P26 FBtr0333474|FBtr0333473|FBtr0333475 9170814|9170814|9170814 9189309|9189309|9175190 X + 9173412 9173491 3'utr mei-P26 FlyBase G60067.1 CCATACACCCATACTCATCCACACACATAAGGCATAACAACGAAACGAATCCTTTGTATTGTGAACATTATGATATCCTG 8 9173470 0.979882712 7 8 49 1 0.903089987 0.25 0 0 8 0 0 8 X:9173412-9173491 6 mei-P26 FBtr0333475|FBtr0333473|FBtr0333474 9170814|9170814|9170814 9175190|9189309|9189309 TGATAT 6mer3-8 dme-miR-283-5p X + 9173452 9173504 3'utr mei-P26 FlyBase G45415.1 CGAAACGAATCCTTTGTATTGTGAACATTATGATATCCTGTTATTTGTTAGTT 6 9173489 0.984895768 5 6 54 1 1 0 0.333333333 0.6 6 0 0 10 X:9173452-9173504 6 3 3038 FBgn0026206 3669.783333 46.77 72.34333333 0.000817487 0.064143682 0.041468921 12 -7 2.5 0.25 dme-miR-282-5p 7mer-A1 GAGGCTA X 9173864 9173870 + X_9173864_9173870_+ 0.815941938 0.816094972 0.816018455 0.000108258 mei-P26 FBtr0333474|FBtr0333473|FBtr0333475 9170814|9170814|9170814 9189309|9189309|9175190 X + 9173778 9173877 3'utr mei-P26 FlyBase G60070.1 ACCATCATTTACTATTGTCATTATTATTAATTATTATTAATTATTATTATTATTATTATTGTTTAGTTTTTACGTTGTTACATTGTGAGGCTACACACAA 29 9173863 0.985569042 9 28 256 0.96875 1.190331698 0.0625 0.103448276 0.1875 29 0 1 31 X:9173778-9173877 7 mei-P26 FBtr0333475|FBtr0333473|FBtr0333474 9170814|9170814|9170814 9175190|9189309|9189309 GAGGCTA 7mer-A1 dme-miR-282-5p X + 9173834 9173882 3'utr mei-P26 FlyBase G45419.1 TATTGTTTAGTTTTTACGTTGTTACATTGTGAGGCTACACACAATTCTG 23 9173862 0.979367917 4 23 170 1 1.579783597 0.105263158 0.434782609 0.657894737 23 0 0 38 X:9173834-9173882 7 20.5 3039 FBgn0026206 3669.783333 46.77 72.34333333 0.005586161 0.438315159 0.283370963 1 2 1.5 0.25 dme-miR-999-3p 6mer2-7 GTTAAC X 9194832 9194837 - X_9194832_9194837_- 0.776848656 0.881815546 0.829332101 0.074222736 CG12118 FBtr0071340|FBtr0071339 9194748|9194748 9194918|9194918 X - 9194781 9194901 3'utr CG12118 FlyBase G65906.1 GTGGTTGCCATTGGAGTTGGACTCCAAATGATGAAGCCGTAGCCTTTTAAGCGATGATGACTGTGTTAACTGTTTAGGTTTCCTGTTCCGACACTGTATATAGCCGACAATGCTGGTGTTA 169 9194844 0.987365231 16 161 1415 0.95215311 1.997823081 0.119617225 0.189349112 0.344497608 169 9 1 199 X:9194781-9194901 6 CG12118 FBtr0071339|FBtr0071340 9194748|9194748 9194918|9194918 GTTAAC 6mer2-7 dme-miR-999-3p X - 9194821 9194862 3'utr CG12118 FlyBase G49627.2 TAGCCTTTTAAGCGATGATGACTGTGTTAACTGTTTAGGTTT 137 9194844 0.693953326 7 129 997 0.961206897 2.348304863 0.099137931 0.437956204 0.668103448 137 9 0 223 X:9194821-9194862 6 142 3040 FBgn0030101 135.7533333 13.14666667 20.01666667 1.046014831 10.80121704 7.09408826 7 7 7 0.25 dme-miR-965-3p 6mer2-7 ACGCTT X 9228908 9228913 - X_9228908_9228913_- 0.940241529 0.870615947 0.905428738 0.049232734 CG12121 FBtr0071334 9228794 9229267 X - 9228831 9228935 3'utr CG12121 FlyBase G65936.1 AATCCGCTTAACGGAATACTGAACGCTTGTGACACCCAGGCCCTATCCTTGGTTTAAGATATACATATACATATAAATAAATACACTTATGTAATTACCTATAAT 21 9228907 0.964455243 8 21 117 1 1.342422681 0.272727273 0.047619048 0.090909091 21 0 0 22 X:9228831-9228935 6 CG12121 FBtr0071334 9228794 9229267 ACGCTT 6mer2-7 dme-miR-965-3p X - 9228844 9228939 3'utr CG12121 FlyBase G49658.1 AATGAATCCGCTTAACGGAATACTGAACGCTTGTGACACCCAGGCCCTATCCTTGGTTTAAGATATACATATACATATAAATAAATACACTTATGT 17 9228908 0.975830396 5 15 96 0.875 1.021189299 0 0.294117647 0.5 17 2 1 21 X:9228844-9228939 6 14.5 3041 FBgn0030109 1482.023333 60.82 93.35 0.009783922 0.238408418 0.155329405 -6 -5 -5.5 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 923037 923043 - X_923037_923043_- 0.427322804 0.370262545 0.398792674 0.040347725 CG3711 FBtr0343361|FBtr0343361|FBtr0343361 922887|922887|922887 924213|924213|924213 X - 922984 923061 5'utr CG3711 FlyBase G63924.1 AATTCTTGTTTCCGAAATTGTGATAAATCAGTTTATTTATGATTGCATTGTGACTATGTTTAAGCAATATTTAAGAAT 37 923044 0.987956581 7 35 319 0.933333333 1.146128036 0.244444444 0.189189189 0.333333333 37 1 2 42 X:922984-923061 7 CG3711 FBtr0343361|FBtr0343361|FBtr0343361 922887|922887|922887 924213|924213|924213 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 923031 923059 5'utr CG3711 FlyBase G48188.1 TTCTTGTTTCCGAAATTGTGATAAATCAG 20 923044 0.814829715 2 20 159 1 1.505149978 0.375 0.4 0.625 20 0 0 32 X:923031-923059 7 26 3042 FBgn0040344 266.6666667 7.813333333 11.92 0.0975 3.327645051 2.181208054 1 1 1 0.25 dme-miR-980-5p 6mer2-7 AAAAAC X 9246098 9246103 - X_9246098_9246103_- 0.882653089 0.999541125 0.941097107 0.082652297 amx FBtr0307281|FBtr0071331 9245913|9245913 9246206|9246206 X - 9246040 9246134 3'utr amx FlyBase G65962.1 ATGCAACCATTAGGAATAGCAAGATCTTCTCAAAAACGTGTACATAATTAATTAGGAAATGTATTTTATTAATAATGCCAAAAGTTCTTTTTTGT 30 9246105 0.882177299 9 29 193 0.970588235 1.51851394 0 0.133333333 0.235294118 30 1 0 33 X:9246040-9246134 6 amx FBtr0307281|FBtr0071331 9245913|9245913 9246206|9246206 AAAAAC 6mer2-7 dme-miR-980-5p X - 9246047 9246133 3'utr amx FlyBase G49675.1 TGCAACCATTAGGAATAGCAAGATCTTCTCAAAAACGTGTACATAATTAATTAGGAAATGTATTTTATTAATAATGCCAAAAGTTCT 14 9246106 0.969540756 6 14 83 1 1.278753601 0.105263158 0.214285714 0.421052632 14 0 0 19 X:9246047-9246133 6 15 3043 FBgn0000077 117.3333333 12.09666667 18.64666667 0.127840909 1.240011022 0.804433321 2 3 2.5 0.25 dme-miR-317-3p 7mer-m8 TGTGTTC X 9254901 9254907 + X_9254901_9254907_+ 0.472648456 0.661394184 0.56702132 0.133463364 CG17754 FBtr0071315|FBtr0340122 9254354|9254354 9255031|9255802 X + 9254865 9255018 5'utr-coding CG17754 FlyBase G60111.1 AACTGCAGCTCACCTTCGCCTCGCCTCGCTCTCGTCTGTGTTCTGACATGATTCCCTGTGGTATGGCATACACCCAGAACTCACCCACTTTCCGCACCGCACACCCCAACCCAGTATTTTCCCCATAACTCTGCTCTTTTCGGCTTGAATCTAA 27 9254899 0.905039927 13 25 176 0.9375 1.477121255 0 0.185185185 0.3125 27 2 0 30 X:9254865-9255018 7 CG17754 FBtr0071315 9254354 9255031 TGTGTTC 7mer-m8 dme-miR-317-3p X + 9254866 9254933 5'utr-coding CG17754 FlyBase G45445.1 ACTGCAGCTCACCTTCGCCTCGCCTCGCTCTCGTCTGTGTTCTGACATGATTCCCTGTGGTATGGCAT 7 9254900 0.984101072 5 7 55 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 X:9254866-9254933 7 6 3044 FBgn0030114 175.6666667 7.656666667 11.80666667 0.034155598 0.783630823 0.508187465 2 1 1.5 0.25 dme-miR-317-3p 8mer-A1 TGTGTTCA X 9258195 9258202 + X_9258195_9258202_+ 0.582517034 0.609709172 0.596113103 0.019227789 ric8a FBtr0346166|FBtr0071317 9258082|9258082 9259202|9258670 X + 9258082 9258213 stop_codon ric8a FlyBase G60123.1 AAGCCACAAATGTATTGCGGGATCTGCTATGGCACAACTTCCAAATAGCTACCAAAAAATCACCTTAAACTCTGCATTTATTCCATAAGTTTACTGTCGAATGTAGCTTCGAATGTGTTCAAAAAGCAGATT 33 9258195 0.927909585 12 29 191 0.891891892 1.217483944 0.189189189 0.090909091 0.189189189 33 3 1 33 X:9258082-9258213 8 ric8a FBtr0071317|FBtr0346166 9258082|9258082 9258670|9259202 TGTGTTCA 8mer-A1 dme-miR-317-3p X + 9258175 9258208 3'utr ric8a FlyBase G45456.1 CTGTCGAATGTAGCTTCGAATGTGTTCAAAAAGC 10 9258195 0.676957862 4 10 66 1 1.113943352 0.153846154 0.2 0.384615385 10 0 0 13 X:9258175-9258208 8 13 3045 FBgn0028292 451.68 19.07666667 29.28333333 0.028781438 0.681460772 0.443938532 0 0 0 0.25 dme-miR-986-5p 8mer-A1 ATTCGAGA X 9258250 9258257 + X_9258250_9258257_+ 0.586839488 0.505410677 0.546125082 0.057578857 ric8a FBtr0346166|FBtr0071317 9258082|9258082 9259202|9258670 X + 9258236 9258276 3'utr ric8a FlyBase G60124.1 ATTTTATACCACATATTCGAGAACATCTCATTATAACCTAC 11 9258266 0.744928111 4 9 64 0.8125 1.113943352 0 0.454545455 0.625 11 3 0 13 X:9258236-9258276 8 ric8a FBtr0071317|FBtr0346166 9258082|9258082 9258670|9259202 ATTCGAGA 8mer-A1 dme-miR-986-5p X + 9258241 9258275 3'utr ric8a FlyBase G45457.1 ATACCACATATTCGAGAACATCTCATTATAACCTA 9 9258266 0.632791542 3 9 50 1 1.041392685 0 0.222222222 0.363636364 9 0 0 11 X:9258241-9258275 8 10 3046 FBgn0028292 451.68 19.07666667 29.28333333 0.022139568 0.524200594 0.341491178 -16 -16 -16 0.25 dme-miR-252-5p 7mer-m8 GTACTTA X 9258459 9258465 + X_9258459_9258465_+ 0.585202168 0.582505196 0.583853682 0.001907067 ric8a FBtr0346166|FBtr0071317 9258082|9258082 9259202|9258670 X + 9258436 9258479 3'utr ric8a FlyBase G60126.1 AACCATTAACCATGTAGAACGTTGTACTTATTAAGTTATTACGC 12 9258458 0.97863072 3 12 125 1 1.113943352 0 0.083333333 0.153846154 12 0 0 13 X:9258436-9258479 7 ric8a FBtr0071317|FBtr0346166 9258082|9258082 9258670|9259202 GTACTTA 7mer-m8 dme-miR-252-5p X + 9258441 9258475 3'utr ric8a FlyBase G45459.1 TTAACCATGTAGAACGTTGTACTTATTAAGTTATT 7 9258458 0.80285385 3 7 70 1 1 0 0.285714286 0.5 7 0 0 10 X:9258441-9258475 7 9.5 3047 FBgn0028292 451.68 19.07666667 29.28333333 0.021032589 0.497990564 0.324416619 1 1 1 0.25 dme-miR-317-3p 8mer-A1 TGTGTTCA X 9259075 9259082 + X_9259075_9259082_+ 0.525647764 0.547573215 0.536610489 0.015503599 ric8a FBtr0346166 9258082 9259202 X + 9259045 9259101 3'utr ric8a FlyBase G60127.1 ATATACAAGAAATCCTATCTAGAGCTTTATTGTGTTCAATTTGCTATAGCGATGATA 41 9259074 0.99074126 2 41 449 1 1.716003344 0.461538462 0.195121951 0.365384615 41 0 0 52 X:9259045-9259101 8 ric8a FBtr0346166 9258082 9259202 TGTGTTCA 8mer-A1 dme-miR-317-3p X + 9259058 9259101 3'utr ric8a FlyBase G45460.1 CCTATCTAGAGCTTTATTGTGTTCAATTTGCTATAGCGATGATA 23 9259074 0.76109212 2 22 258 0.941176471 1.028028724 0.411764706 0.347826087 0.558823529 23 0 2 32 X:9259058-9259101 8 32 3048 FBgn0028292 451.68 19.07666667 29.28333333 0.070846617 1.677441901 1.09277177 1 1 1 0.25 dme-miR-34-5p 7mer-A1 ACTGCCA X 9358432 9358438 + X_9358432_9358438_+ 0.81474133 0.8120616 0.813401465 0.001894834 BCL7-like FBtr0071358 9357680 9358594 X + 9358376 9358454 3'utr BCL7-like FlyBase G60146.1 AACCAGTAAACCTCTTTATAGTACACTTACCAACATAAATGTGACATTAACATTTAACTGCCAGCAGGGCGCGAAAAAT 27 9358429 0.701607745 7 24 148 0.939393939 1.190331698 0.272727273 0.148148148 0.303030303 27 1 1 31 X:9358376-9358454 7 BCL7-like FBtr0071358 9357680 9358594 ACTGCCA 7mer-A1 dme-miR-34-5p X + 9358380 9358474 3'utr BCL7-like FlyBase G45474.1 AGTAAACCTCTTTATAGTACACTTACCAACATAAATGTGACATTAACATTTAACTGCCAGCAGGGCGCGAAAAATATGCAAATGTTCGCTGAAGA 15 9358429 0.969032796 6 14 84 1 1.431363764 0.444444444 0.466666667 0.703703704 15 0 0 27 X:9358380-9358474 7 15.5 3049 FBgn0026149 221.2233333 16.18333333 24.75 0.070064942 0.957775489 0.626262626 3 3 3 0.25 dme-miR-282-5p 6mer2-7 GAGGCT X 939244 939249 + X_939244_939249_+ 0.986464901 0.985848918 0.986156909 0.000435578 CG32815 FBtr0307181|FBtr0345512 938011|938011 939424|939424 X + 939220 939259 3'utr CG32815 FlyBase G57881.1 TACAGAGTAAGTTACGCAAAGTATGAGGCTTGCATTTACA 13 939244 0.852187287 3 13 73 1 1.204119983 0 0.153846154 0.3125 13 0 0 16 X:939220-939259 6 CG32815 FBtr0345512|FBtr0307181 938011|938011 939424|939424 GAGGCT 6mer2-7 dme-miR-282-5p X + 939228 939254 3'utr CG32815 FlyBase G43788.1 AAGTTACGCAAAGTATGAGGCTTGCAT 5 939243 0.657457466 2 5 23 1 0.903089987 0 0.6 0.75 5 0 0 8 X:939228-939254 6 9 3050 FBgn0052815 22.11333333 0.906666667 1.36 0.406994272 9.926470588 6.617647059 0 1 0.5 0.25 dme-miR-79-3p 7mer-m8 TAGCTTT X 939309 939315 - X_939309_939315_- 0.617445207 0.616377807 0.616911507 0.000754766 CG3704 FBtr0070188 939168 939463 X - 939277 939368 3'utr CG3704 FlyBase G63941.1 GTGTGTTCGTCACTTGCACCTCCGATATTTGGTTTGTATATATGGACTTAGTTTAGCTTTGCAAATTAGTGATAACATATACATATGGAGGA 43 939303 0.924611062 12 41 418 0.98245614 1.748188027 0.140350877 0.186046512 0.385964912 43 1 0 56 X:939277-939368 7 CG3704 FBtr0070188 939168 939463 TAGCTTT 7mer-m8 dme-miR-79-3p X - 939255 939385 3'utr CG3704 FlyBase G48199.1 AAAACATTCAATATAGTGTGTGTTCGTCACTTGCACCTCCGATATTTGGTTTGTATATATGGACTTAGTTTAGCTTTGCAAATTAGTGATAACATATACATATGGAGGATATATCCCGCTCGTAAATGTAA 44 939303 0.98851116 16 43 391 0.983870968 1.785329835 0.209677419 0.295454545 0.5 44 1 0 61 X:939255-939385 7 29 3051 FBgn0040346 168.8866667 13.69666667 21.07 0.171712786 2.11730348 1.376364499 -12 -12 -12 0.25 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 942565 942570 + X_942565_942570_+ 0.737054934 0.878615473 0.807835204 0.10009846 mus81 FBtr0070170|FBtr0070170|FBtr0070170 942473|942473|942473 943229|943229|943229 X + 942519 942614 3'utr mus81 FlyBase G57884.1 GAGTTTATACATAAGTGAGAGAGAGAATACGTTGGACATTGAATAGTGTGATCTAGTCTAAGCCAAAAAATGTACAAGTCAGCCGCCCTTAGATGT 264 942551 0.751229806 15 256 1614 0.969491525 2.155336037 0.122033898 0.117870722 0.213559322 263 8 1 286 X:942519-942614 6 mus81 FBtr0070170|FBtr0070170|FBtr0070170 942473|942473|942473 943229|943229|943229 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X + 942482 942600 3'utr mus81 FlyBase G43791.1 AATTGATTTTATGGGACATATCTAAGGTTATATACACGAGTTTATACATAAGTGAGAGAGAGAATACGTTGGACATTGAATAGTGTGATCTAGTCTAAGCCAAAAAATGTACAAGTCAG 203 942551 0.976842124 16 195 1264 0.950331126 2.156851901 0.132450331 0.36453202 0.572847682 203 14 1 287 X:942482-942600 6 99 3052 FBgn0040347 59.78 3.366666667 5.13 1.656072265 29.40594059 19.29824561 14 14 14 0.25 dme-miR-1006-3p 7mer-A1 GAATTTA X 9572113 9572119 - X_9572113_9572119_- 0.821358385 0.716395605 0.768876995 0.074219908 CG32699 FBtr0110850 9571535 9573007 X - 9572098 9572131 3'utr CG32699 FlyBase G66083.1 ATTGCTGAATTTGAATTTAAGGATCTCCGATCTG 7 9572115 0.845304947 5 7 54 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 X:9572098-9572131 7 CG32699 FBtr0110850 9571535 9573007 GAATTTA 7mer-A1 dme-miR-1006-3p X - 9572094 9572119 3'utr CG32699 FlyBase G49749.1 GAATTTAAGGATCTCCGATCTGTTGT 5 9572115 0.70810413 3 3 40 0.833333333 0.698970004 0.833333333 0.2 0.333333333 5 1 0 5 X:9572094-9572119 7 6 3053 FBgn0052699 2538.573333 91.48333333 141.3333333 0.002363532 0.065585717 0.04245283 -4 -4 -4 0.25 dme-miR-308-3p 7mer-m1 TGTGATT X 9572664 9572670 - X_9572664_9572670_- 0.438612346 0.476038843 0.457325594 0.026464532 CG32699 FBtr0110850 9571535 9573007 X - 9572643 9572691 3'utr CG32699 FlyBase G66086.1 AAACGCAAGTCATTTCATCTTTGTGATTCTTATTATACACAACTATGTT 77 9572671 0.682805888 9 68 881 0.913978495 1.452297671 0.021505376 0.184210526 0.333333333 76 6 2 85 X:9572643-9572691 7 CG32699 FBtr0110850 9571535 9573007 TGTGATT 7mer-m1 dme-miR-308-3p X - 9572649 9572773 3'utr CG32699 FlyBase G49752.1 AGTTTCATGTGAACAAATGCTCACAGCACATAGATCCGGATCTGATTGCGCCCAGCTATGTTATTATTTATACTCGGACTCCAAACGCAAGTCATTTCATCTTTGTGATTCTTATTATACACAAC 86 9572671 0.928619987 15 81 724 0.952830189 1.402261382 0.094339623 0.197674419 0.349056604 86 2 3 101 X:9572649-9572773 7 59 3054 FBgn0052699 2538.573333 91.48333333 141.3333333 0.023241401 0.644926216 0.41745283 1 1 1 0.25 dme-miR-1007-3p 6mer3-8 TGAGCT X 9589018 9589023 + X_9589018_9589023_+ 0.808300553 0.911149891 0.859725222 0.072725437 Hex-A FBtr0333335 9587843 9589813 X + 9588976 9589045 3'utr Hex-A FlyBase G60171.1 AAACTGTTTTTTTTTTTCCTTTTGATATAGAAACGCACTTTGTGAGCTATTATTTATGTAATTGTACATT 99 9589015 0.984468024 11 96 766 0.975 1.591064607 0.033333333 0.202020202 0.341666667 99 1 2 117 X:9588976-9589045 6 Hex-A FBtr0333335 9587843 9589813 TGAGCT 6mer3-8 dme-miR-1007-3p X + 9588945 9589042 3'utr Hex-A FlyBase G45492.1 ACACTTAAGCAGGTAAACTCTAAACAAAAATAAACTGTTTTTTTTTTTCCTTTTGATATAGAAACGCACTTTGTGAGCTATTATTTATGTAATTGTAC 56 9589015 0.987737718 14 53 472 0.92 1.537819095 0.053333333 0.214285714 0.413333333 56 5 1 69 X:9588945-9589042 6 71.5 3055 FBgn0001186 1183.94 43.5 66.29 0.060391574 1.643678161 1.078594056 3 3 3 0.25 dme-miR-184-3p 7mer-A1 CCGTCCA X 9604044 9604050 + X_9604044_9604050_+ 0.562518117 0.594823972 0.578671045 0.022843721 Gga FBtr0071363 9604012 9604280 X + 9603978 9604069 stop_codon Gga FlyBase G60182.1 TCGATTGTGGCCAAAGGCATTGACTATGTGGACTAAAATACCCCGACATATAAGTATCACCCGCTCCCGTCCACTGAAAGCGCAGGAGGAAA 125 9604042 0.94823978 8 121 529 0.967532468 1.395035018 0.474025974 0.192 0.344155844 125 0 5 149 X:9603978-9604069 7 Gga FBtr0071363 9604012 9604280 CCGTCCA 7mer-A1 dme-miR-184-3p X + 9604029 9604268 3'utr Gga FlyBase G45496.1 AAGTATCACCCGCTCCCGTCCACTGAAAGCGCAGGAGGAAAATGAAAAGAACGAAAGACAGTCAATTTTCCCGCATCTATGTTGTGCTCCCCATTATCTTAAAGATACTTTTGGTTTTTCAATTTCTGTATTGTATGTGTATGTACGCTGATAAGATTTTTATTCAAATTGCATTTTGCATACAAACGATTTAGTCGTAATATAATTATGTATCAAAGGTTTATAAATTATGAAAAAGTC 98 9604042 0.952880804 17 94 443 0.95 2.123851641 0.514285714 0.316326531 0.521428571 98 7 0 133 X:9604029-9604268 7 91 3056 FBgn0030141 373.9333333 19.18333333 29.23 0.243358888 4.743701129 3.113239822 2 2 2 0.25 dme-miR-305-5p 7mer-m1 GTACAAT X 9604477 9604483 - X_9604477_9604483_- 0.443166537 0.765581447 0.604373992 0.227981762 Lst8 FBtr0071368 9604152 9604877 X - 9604467 9604529 3'utr Lst8 FlyBase G66103.1 AATTACGATCTATCTTAAGCCAGTTAAATCAACAAATATCTCAGATGTACAATCATCCGCAAA 9 9604501 0.975704172 6 8 50 0.888888889 0.903089987 0 0 0 9 1 0 8 X:9604467-9604529 7 Lst8 FBtr0071368 9604152 9604877 GTACAAT 7mer-m1 dme-miR-305-5p X - 9604468 9604502 3'utr Lst8 FlyBase G49764.1 ATCAACAAATATCTCAGATGTACAATCATCCGCAA 5 9604483 0.972030232 4 4 24 0.909090909 1 0 0.8 0.909090909 5 1 0 10 X:9604468-9604502 7 5.5 3057 FBgn0264691 581.5666667 40.63666667 62.58666667 0.009457213 0.135345747 0.087878142 18 0 9 0.25 dme-miR-965-3p 6mer2-7 ACGCTT X 9621751 9621756 + X_9621751_9621756_+ 0.999959169 0.999851313 0.999905241 7.63E-05 CG42797 FBtr0332963|FBtr0303708|FBtr0303709|FBtr0303710 9621666|9621666|9621666|9621666 9622441|9622441|9622166|9623243 X + 9621732 9621775 5'utr CG42797 FlyBase G60189.1 ACACAAAACACGCGCCTAAACGCTTTATTTCGATTTTAGAAGTT 29 9621748 0.97936369 4 27 188 0.90625 1.462397998 0.1875 0.103448276 0.1875 29 3 0 29 X:9621732-9621775 6 CG42797 FBtr0303710|FBtr0303709|FBtr0303708|FBtr0332963 9621666|9621666|9621666|9621666 9623243|9622166|9622441|9622441 ACGCTT 6mer2-7 dme-miR-965-3p X + 9621728 9621767 5'utr CG42797 FlyBase G45501.1 AGATACACAAAACACGCGCCTAAACGCTTTATTTCGATTT 12 9621748 0.969116415 4 12 70 1 1.204119983 0 0.25 0.4375 12 0 0 16 X:9621728-9621767 6 20.5 3058 FBgn0261931 415.6266667 8.42 12.89333333 0.04932311 2.434679335 1.589968976 3 3 3 0.25 dme-miR-968-5p 6mer2-7 CTACTT X 9622176 9622181 + X_9622176_9622181_+ 0.516630638 0.851191013 0.683910825 0.236569928 CG42797 FBtr0332963|FBtr0303708|FBtr0303710 9621666|9621666|9621666 9622441|9622441|9623243 X + 9622153 9622225 5'utr-coding CG42797 FlyBase G60191.1 ATGCCTAGCCATAGACAGACTTGCTACTTTAGGCATGGCATCCCACTAGTTTGTAGACAATTTGCCTTCGCCT 7 9622181 0.973934829 6 6 44 0.875 0.84509804 0.125 0.142857143 0.25 7 1 0 7 X:9622153-9622225 6 CG42797 FBtr0303710|FBtr0303708|FBtr0332963 9621666|9621666|9621666 9623243|9622441|9622441 CTACTT 6mer2-7 dme-miR-968-5p X + 9622133 9622193 5'utr-coding CG42797 FlyBase G45503.1 CAAAATTGTAAAGCAAATAAATGCCTAGCCATAGACAGACTTGCTACTTTAGGCATGGCAT 6 9622175 0.965650451 6 6 32 1 1.079181246 0 0.5 0.75 6 0 0 12 X:9622133-9622193 6 4 3059 FBgn0261931 415.6266667 8.42 12.89333333 0.009624022 0.475059382 0.310237849 -5 1 -2 0.25 dme-miR-308-3p 7mer-m1 TGTGATT X 9666507 9666513 - X_9666507_9666513_- 0.51972645 0.52085629 0.52029137 0.00079896 nej FBtr0333521|FBtr0302723 9665671|9665440 9669706|9669706 X - 9666501 9666544 3'utr nej FlyBase G66134.1 AGAGAAAGAGAGAGCATATTCCAAAACTATTTGTGATTACAATT 22 9666515 0.968020355 5 22 123 1 1.462397998 0.172413793 0.272727273 0.448275862 22 0 0 29 X:9666501-9666544 7 nej FBtr0333521|FBtr0302723 9665671|9665440 9669706|9669706 TGTGATT 7mer-m1 dme-miR-308-3p X - 9666467 9666543 3'utr nej FlyBase G49788.1 GAGAAAGAGAGAGCATATTCCAAAACTATTTGTGATTACAATTATATATGATGATGATGAAGAGGAAGAAAGCGGAA 26 9666514 0.976159546 7 25 161 0.972972973 1.255272505 0.135135135 0.346153846 0.540540541 26 0 1 36 X:9666467-9666543 7 16.5 3060 FBgn0261617 2552.683333 20.01666667 30.83666667 0.006463786 0.824313072 0.535077289 2 1 1.5 0.25 dme-miR-34-5p 6mer3-8 CACTGC X 9667624 9667629 - X_9667624_9667629_- 0.587049536 0.829338713 0.708194125 0.171324336 nej FBtr0333521|FBtr0302723 9665671|9665440 9669706|9669706 X - 9667593 9667700 3'utr nej FlyBase G66139.1 GACAGCAAGAGAGCGAGACAGTAGATGAGCAGGAGAGGATTTTGTAAATTTTAGATACTAGGATACTTATTCACTGCGCATAAAAATGCCTTCAATTGCGACATCAGC 20 9667613 0.959421575 7 20 107 1 1.431363764 0.37037037 0.35 0.518518519 20 0 0 27 X:9667593-9667700 6 nej FBtr0333521|FBtr0302723 9665671|9665440 9669706|9669706 CACTGC 6mer3-8 dme-miR-34-5p X - 9667594 9667693 3'utr nej FlyBase G49790.1 AGAGAGCGAGACAGTAGATGAGCAGGAGAGGATTTTGTAAATTTTAGATACTAGGATACTTATTCACTGCGCATAAAAATGCCTTCAATTGCGACATCAG 19 9667614 0.964004892 8 19 105 1 1.414973348 0.153846154 0.315789474 0.5 19 0 0 26 X:9667594-9667693 6 10 3061 FBgn0261617 2552.683333 20.01666667 30.83666667 0.003917446 0.49958368 0.324289266 -16 -15 -15.5 0.25 dme-miR-305-3p 7mer-m8 ATGTGCC X 9668813 9668819 - X_9668813_9668819_- 0.673764535 0.645602178 0.659683356 0.019913753 nej FBtr0333521|FBtr0302723 9665671|9665440 9669706|9669706 X - 9668795 9668828 3'utr nej FlyBase G66145.1 ATAGTGAACATGTGCCTGTTGGCGATCGGCAGTT 8 9668818 0.696456039 4 8 48 1 1 0 0.125 0.3 8 0 0 10 X:9668795-9668828 7 nej FBtr0333521|FBtr0302723 9665671|9665440 9669706|9669706 ATGTGCC 7mer-m8 dme-miR-305-3p X - 9668797 9668837 3'utr nej FlyBase G49797.1 ATATAGCCTATAGTGAACATGTGCCTGTTGGCGATCGGCAG 5 9668818 0.936083545 3 4 33 0.833333333 0.698970004 0 0.2 0.333333333 5 1 0 5 X:9668797-9668837 7 6 3062 FBgn0261617 2552.683333 20.01666667 30.83666667 0.002350468 0.299750208 0.19457356 -1 -1 -1 0.25 dme-miR-14-3p 7mer-A1 AGACTGA X 9669618 9669624 - X_9669618_9669624_- 0.813989004 0.822088064 0.818038534 0.005726929 nej FBtr0333521|FBtr0302723|FBtr0071402|FBtr0302722 9665671|9665440|9669513|9669513 9669706|9669706|9669706|9669706 X - 9669529 9669660 5'utr nej FlyBase G66150.1 ATGGTTGGTAGGCGATGTGGCTAGAGGGCTAGGGCTAGACTGAATGAATGAATGAGTGTCCAGTAGCCGCAGACGGGATGACGACGAAGACCAACCGGCAGGGATAACCAGTGTGTGTTAAGCGAATTAACA 53 9669625 0.904449717 15 49 208 0.925373134 1.792391689 0.373134328 0.226415094 0.388059701 53 5 0 62 X:9669529-9669660 7 nej FBtr0071402|FBtr0302722|FBtr0333521|FBtr0302723 9669513|9669513|9665671|9665440 9669706|9669706|9669706|9669706 AGACTGA 7mer-A1 dme-miR-14-3p X - 9669569 9669664 5'utr nej FlyBase G49801.1 TACAATGGTTGGTAGGCGATGTGGCTAGAGGGCTAGGGCTAGACTGAATGAATGAATGAGTGTCCAGTAGCCGCAGACGGGATGACGACGAAGACC 42 9669625 0.93079366 9 41 155 0.985074627 1.819543936 0.343283582 0.380952381 0.611940299 42 1 0 66 X:9669569-9669664 7 31 3063 FBgn0261617 2552.683333 20.01666667 30.83666667 0.012144084 1.548709409 1.005296725 1 1 1 0.5 dme-miR-184-3p 6mer3-8 TCCGTC 2L 10011984 10011989 + 2L_10011984_10011989_+ 0.589489889 0.536388648 0.562939269 0.037548289 Trp1 FBtr0305986|FBtr0343741 10011911|10011911 10012118|10012118 2L + 10011956 10012010 3'utr Trp1 FlyBase G3649.1 CGAATTTGTATTTATAATTTCTTTTATTTCCGTCGAACTTTTGGTTGTATGTTTT 220 10011983 0.748555056 9 220 2429 1 2.440909082 0.054347826 0.190909091 0.355072464 220 0 0 276 2L:10011956-10012010 6 Trp1 FBtr0305986|FBtr0343741 10011911|10011911 10012118|10012118 TCCGTC 6mer3-8 dme-miR-184-3p 2L + 10011962 10012010 3'utr Trp1 FlyBase G2880.1 TGTATTTATAATTTCTTTTATTTCCGTCGAACTTTTGGTTGTATGTTTT 158 10011983 0.757499048 10 156 1705 0.982300885 2.045322979 0.088495575 0.310126582 0.517699115 158 3 1 222 2L:10011962-10012010 6 188 1 FBgn0011584 1171.806667 85.36666667 131.8133333 0.160436022 2.20226474 1.426259357 1 1 1 0.5 dme-miR-276a-3p 6mer2-7 GTTCCT 2L 10012081 10012086 + 2L_10012081_10012086_+ 0.939127282 0.87498448 0.907055881 0.045355809 Trp1 FBtr0305986|FBtr0343741 10011911|10011911 10012118|10012118 2L + 10012025 10012102 3'utr Trp1 FlyBase G3650.1 ATATTGAATAGCGCAAAAGACATACATTAACTTTAGCTTTTAATTGTAAATCCTTTGTTCCTTAATAAATATTATTGT 26 10012079 0.993348097 9 26 317 1 1.505149978 0.125 0.230769231 0.375 26 0 0 32 2L:10012025-10012102 6 Trp1 FBtr0305986|FBtr0343741 10011911|10011911 10012118|10012118 GTTCCT 6mer2-7 dme-miR-276a-3p 2L + 10012026 10012098 3'utr Trp1 FlyBase G2881.1 TATTGAATAGCGCAAAAGACATACATTAACTTTAGCTTTTAATTGTAAATCCTTTGTTCCTTAATAAATATTA 21 10012079 0.992228769 8 19 213 0.870967742 1.431363764 0.225806452 0.380952381 0.580645161 21 4 0 27 2L:10012026-10012098 6 17 2 FBgn0011584 1171.806667 85.36666667 131.8133333 0.014507513 0.199140961 0.128970261 2 2 2 0.5 dme-miR-1003-3p 8mer-A1 ATGTGAGA 2L 10013106 10013113 + 2L_10013106_10013113_+ 0.536631751 0.515667799 0.526149775 0.014823787 Trp1 FBtr0079931|FBtr0079932 10012492|10012492 10013170|10013170 2L + 10013080 10013120 3'utr Trp1 FlyBase G3652.1 AAATAAAGCTAGGCAATTCTGATCTGATGTGAGAGATATTT 50 10013099 0.613291843 6 45 346 0.907692308 1.071882007 0.369230769 0.28 0.446153846 50 2 4 59 2L:10013080-10013120 8 Trp1 FBtr0079931|FBtr0079932 10012492|10012492 10013170|10013170 ATGTGAGA 8mer-A1 dme-miR-1003-3p 2L + 10013065 10013120 3'utr Trp1 FlyBase G2883.1 AATTAACTATTATATAAATAAAGCTAGGCAATTCTGATCTGATGTGAGAGATATTT 53 10013099 0.622704741 8 50 341 0.915662651 1.880813592 0.313253012 0.396226415 0.614457831 53 7 0 76 2L:10013065-10013120 8 49 3 FBgn0011584 1171.806667 85.36666667 131.8133333 0.041815772 0.573994533 0.371737811 7 7 7 0.5 dme-miR-305-5p 6mer3-8 AGTACA 2L 10114 10119 - 2L_10114_10119_- 0.861996613 0.779949712 0.820973162 0.058015919 l(2)gl FBtr0078168|FBtr0306591|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0306590|FBtr0078170|FBtr0330655|FBtr0078171|FBtr0306592|FBtr0078166 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11214|11214|11214|11214|11309|11214|11214|11214 2L - 10108 10152 3'utr l(2)gl FlyBase G6257.1 TGAGAAGTAAGTTAATGAGCCTTCAAGTACTTTAGTACATAATGT 25 10137 0.747475541 5 23 187 0.961538462 1.096910013 0.269230769 0.04 0.076923077 25 0 1 25 2L:10108-10152 6 l(2)gl FBtr0306592|FBtr0306590|FBtr0078166|FBtr0330655|FBtr0078171|FBtr0078169|FBtr0078167|FBtr0306589|FBtr0078170|FBtr0078168|FBtr0306591 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11309|11214|11214|11214|11214|11214|11214|11214 AGTACA 6mer3-8 dme-miR-305-5p 2L - 10108 10152 3'utr l(2)gl FlyBase G4879.1 TGAGAAGTAAGTTAATGAGCCTTCAAGTACTTTAGTACATAATGT 13 10121 0.637309891 6 13 93 1 1.322219295 0.142857143 0.461538462 0.666666667 13 0 0 21 2L:10108-10152 6 12.5 4 FBgn0002121 6538.69 148.3266667 227.85 0.001911698 0.08427345 0.054860654 18 2 10 0.5 dme-miR-34-5p 8mer-A1 CACTGCCA 2L 10202680 10202687 - 2L_10202680_10202687_- 0.641373495 0.639139718 0.640256606 0.001579535 CG34159 FBtr0112350 10202518 10202882 2L - 10202635 10202704 3'utr CG34159 FlyBase G9506.1 AAAAAACGATTTAAATCCACTGCCAGCTGAAAGGCAAACCATGATTCAATAAAGTGTACATTGGCAAACG 41 10202689 0.9615275 7 39 196 0.957446809 1.653212514 0.319148936 0.146341463 0.255319149 41 2 0 45 2L:10202635-10202704 8 CG34159 FBtr0112350 10202518 10202882 CACTGCCA 8mer-A1 dme-miR-34-5p 2L - 10202613 10202703 3'utr CG34159 FlyBase G7375.1 AAAAACGATTTAAATCCACTGCCAGCTGAAAGGCAAACCATGATTCAATAAAGTGTACATTGGCAAACGATTTTTATCCCTGGCACCCTGA 15 10202689 0.970356615 5 12 69 0.782608696 0.954242509 0.304347826 0.4 0.608695652 15 4 1 18 2L:10202613-10202703 8 25 5 FBgn0085188 482 64.53 98.53333333 0.05186722 0.387416705 0.253721245 2 2 2 0.5 dme-miR-1012-3p 6mer3-8 TTGACT 2L 10204785 10204790 - 2L_10204785_10204790_- 0.878060152 0.948710453 0.913385302 0.049957306 CG5734 FBtr0079960 10204755 10205368 2L - 10204764 10204827 3'utr CG5734 FlyBase G9509.1 CTAAACAATGAACTATGAATGTACATTCCCTTATCTGTTGACTCACTTCCAAATAAATGACAAA 21 10204790 0.990806718 8 19 191 0.92 0.884606581 0.04 0.142857143 0.28 21 0 2 23 2L:10204764-10204827 6 CG5734 FBtr0079960 10204755 10205368 TTGACT 6mer3-8 dme-miR-1012-3p 2L - 10204758 10204818 3'utr CG5734 FlyBase G7377.1 GAACTATGAATGTACATTCCCTTATCTGTTGACTCACTTCCAAATAAATGACAAAAATGTT 16 10204790 0.969612823 8 14 138 0.904761905 1.278753601 0.238095238 0.3125 0.476190476 16 2 0 19 2L:10204758-10204818 6 16 6 FBgn0032191 425.53 23.29666667 35.42 0.037600169 0.686793533 0.451722191 0 0 0 0.5 dme-miR-92b-3p 7mer-m1 TGCAATT 2L 10338710 10338716 + 2L_10338710_10338716_+ 0.619735175 0.659130157 0.639432666 0.027856472 GATAd FBtr0333098 10338407 10339185 2L + 10338633 10338733 3'utr GATAd FlyBase G3782.1 AAATTGAACCAGTATGTCAAAACTTTTAAATAATATCACACTAAATATAGACCTTAAGAGAGGACATCAATACTTAATGCAATTAAATTAAAAATAAAATT 53 10338705 0.974643649 10 51 344 0.970588235 1.819543936 0.014705882 0.226415094 0.397058824 53 2 0 66 2L:10338633-10338733 7 GATAd FBtr0333098 10338407 10339185 TGCAATT 7mer-m1 dme-miR-92b-3p 2L + 10338676 10338727 3'utr GATAd FlyBase G2993.1 AATATAGACCTTAAGAGAGGACATCAATACTTAATGCAATTAAATTAAAAAT 30 10338706 0.668591608 6 26 203 0.787234043 1.568201724 0 0.333333333 0.574468085 30 10 0 37 2L:10338676-10338727 7 38 7 FBgn0032223 1151.333333 44.42 68.51 0.033005211 0.855470509 0.554663553 5 4 4.5 0.5 dme-miR-8-3p 7mer-m8 CAGTATT 2L 10338765 10338771 + 2L_10338765_10338771_+ 0.59367757 0.582012218 0.587844894 0.008248683 GATAd FBtr0333098 10338407 10339185 2L + 10338740 10338788 3'utr GATAd FlyBase G3783.1 ATTTATATTTATTAAAACCATTTTACAGTATTTTTAATTTTTTAATAAC 17 10338762 0.770127933 7 15 206 0.952380952 1.301029996 0 0.176470588 0.333333333 17 1 0 20 2L:10338740-10338788 7 GATAd FBtr0333098 10338407 10339185 CAGTATT 7mer-m8 dme-miR-8-3p 2L + 10338740 10338785 3'utr GATAd FlyBase G2994.1 ATTTATATTTATTAAAACCATTTTACAGTATTTTTAATTTTTTAAT 8 10338761 0.96382894 3 6 85 0.818181818 0.954242509 0 0.375 0.545454545 8 2 0 9 2L:10338740-10338785 7 11.5 8 FBgn0032223 1151.333333 44.42 68.51 0.009988419 0.258892391 0.167858707 3 4 3.5 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 10338915 10338921 + 2L_10338915_10338921_+ 0.67576239 0.676210244 0.675986317 0.000316642 GATAd FBtr0333098|FBtr0333098|FBtr0333098 10338407|10338407|10338407 10339185|10339185|10339185 2L + 10338870 10338942 3'utr GATAd FlyBase G3784.1 CTAAAAAATAATAATGTTTTAAATCTCTTGCCTATACGAAAATCATGTGATAATATAATAATCTCCACAAAAC 49 10338912 0.909228285 10 46 316 0.954545455 1.799340549 0 0.265306122 0.454545455 49 3 0 63 2L:10338870-10338942 7 GATAd FBtr0333098|FBtr0333098|FBtr0333098 10338407|10338407|10338407 10339185|10339185|10339185 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 10338819 10338939 3'utr GATAd FlyBase G2995.1 AGTTTTAACAATGATTTTTCAGCTGTCTTTGCAATTGAACAACTTCTAAAGCTAAAAAATAATAATGTTTTAAATCTCTTGCCTATACGAAAATCATGTGATAATATAATAATCTCCACAA 40 10338912 0.980032957 11 37 264 0.965517241 1.748188027 0 0.325 0.534482759 40 2 0 56 2L:10338819-10338939 7 37.5 9 FBgn0032223 1151.333333 44.42 68.51 0.032570932 0.844214318 0.547365348 3 3 3 0.5 "dme-miR-275-3p,dme-miR-306-5p" 6mer2-7 TACCTG 2L 10402800 10402805 + 2L_10402800_10402805_+ 0.66912813 0.77889936 0.724013745 0.077620031 Cnot4 FBtr0331638|FBtr0304112 10402769|10402769 10403206|10403206 2L + 10402746 10402832 stop_codon Cnot4 FlyBase G3859.1 TTTAAAAAGCCGTCAATTCGTTTAGCTACAATACATATAAATAATACATTTGTTTACCTGTACTCTTTATTAAATATTTCTTAAAGT 25 10402806 0.974140162 8 24 271 1 1.531478917 0 0.32 0.5 25 0 0 34 2L:10402746-10402832 6 Cnot4 FBtr0331638|FBtr0080014|FBtr0304112|FBtr0080013|FBtr0304113|FBtr0080010|FBtr0080012|FBtr0331639|FBtr0331637|FBtr0080009|FBtr0080011 10402769|10402769|10402769|10402769|10402769|10402769|10402769|10402769|10402769|10402769|10402769 10403206|10402882|10403206|10402882|10402882|10402882|10402882|10402882|10402882|10402882|10402882 TACCTG 6mer2-7 "dme-miR-275-3p,dme-miR-306-5p" 2L + 10402788 10402812 3'utr Cnot4 FlyBase G3051.1 AATACATTTGTTTACCTGTACTCTT 6 10402798 0.648814865 3 6 57 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2L:10402788-10402812 6 13.5 10 FBgn0051716 2626.393333 88.17666667 135.32 0.005140129 0.153101728 0.099763523 -6 2 -2 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 10534 10540 - 2L_10534_10540_- 0.694579774 0.700832529 0.697706151 0.004421327 l(2)gl FBtr0078168|FBtr0078168|FBtr0078168|FBtr0306591|FBtr0306591|FBtr0306591|FBtr0078169|FBtr0078169|FBtr0078169|FBtr0078167|FBtr0078167|FBtr0078167|FBtr0306589|FBtr0306589|FBtr0306589|FBtr0306590|FBtr0306590|FBtr0306590|FBtr0078170|FBtr0078170|FBtr0078170|FBtr0330655|FBtr0330655|FBtr0330655|FBtr0078171|FBtr0078171|FBtr0078171|FBtr0306592|FBtr0306592|FBtr0306592|FBtr0078166|FBtr0078166|FBtr0078166 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11309|11309|11309|11214|11214|11214|11214|11214|11214|11214|11214|11214 2L - 10484 10562 3'utr l(2)gl FlyBase G6260.1 CTTTTATTTTCGGTTAAAATATTGTGATACAAAAAAATGCCCTTACAAAATTAGGACAACAACAATTTGCTTTATTATG 220 10541 0.852784174 12 203 1415 0.926199262 1.195553739 0.520295203 0.195454545 0.346863469 220 5 15 251 2L:10484-10562 7 l(2)gl FBtr0306592|FBtr0306592|FBtr0306592|FBtr0306590|FBtr0306590|FBtr0306590|FBtr0078166|FBtr0078166|FBtr0078166|FBtr0330655|FBtr0330655|FBtr0330655|FBtr0078171|FBtr0078171|FBtr0078171|FBtr0078169|FBtr0078169|FBtr0078169|FBtr0078167|FBtr0078167|FBtr0078167|FBtr0306589|FBtr0306589|FBtr0306589|FBtr0078170|FBtr0078170|FBtr0078170|FBtr0078168|FBtr0078168|FBtr0078168|FBtr0306591|FBtr0306591|FBtr0306591 9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837|9837 11214|11214|11214|11214|11214|11214|11214|11214|11214|11309|11309|11309|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214|11214 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 10513 10561 3'utr l(2)gl FlyBase G4883.1 TTTTATTTTCGGTTAAAATATTGTGATACAAAAAAATGCCCTTACAAAA 112 10541 0.695107335 6 103 724 0.909090909 1.273001272 0.557575758 0.357142857 0.563636364 112 8 7 150 2L:10513-10561 7 154 11 FBgn0002121 6538.69 148.3266667 227.85 0.023552118 1.03824891 0.675883257 1 1 1 0.5 dme-miR-7-5p 7mer-m8 GTCTTCC 2L 10838165 10838171 - 2L_10838165_10838171_- 0.433896194 0.5262064 0.480051297 0.065273168 CG6700 FBtr0301710|FBtr0080187 10837858|10837730 10839315|10839315 2L - 10838145 10838225 3'utr CG6700 FlyBase G9859.1 CAAAATTATCGGAAGTTCAAACTCAACGTTTTGGAGTATGGCAAATTCAACCTGGTCTTCCCCGTCGCCACTAAACATCCG 14 10838168 0.695837135 6 13 83 0.875 1.146128036 0.0625 0.142857143 0.25 14 2 0 14 2L:10838145-10838225 7 CG6700 FBtr0301710|FBtr0080187 10837858|10837730 10839315|10839315 GTCTTCC 7mer-m8 dme-miR-7-5p 2L - 10838148 10838198 3'utr CG6700 FlyBase G7625.1 GTTTTGGAGTATGGCAAATTCAACCTGGTCTTCCCCGTCGCCACTAAACAT 8 10838168 0.977616939 2 8 61 1 1.041392685 0.090909091 0.25 0.454545455 8 0 0 11 2L:10838148-10838198 7 9 12 FBgn0032305 1004.78 26.73333333 40.84666667 0.008957185 0.336658354 0.220336217 -3 -3 -3 0.5 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 2L 10839257 10839264 - 2L_10839257_10839264_- 0.666026443 0.665838077 0.66593226 0.000133148 CG6700 FBtr0301710|FBtr0080187 10837858|10837730 10839315|10839315 2L - 10839045 10839288 3'utr CG6700 FlyBase G9865.1 TGGCATGAAGCCCTATTCGATTTTGTACCTGATTTCCGAGCTTTTCGGATGTTAGTGTCCTTTTTCGGACTGCGGATGCAACTCTCTTGGCCCTGTTTAAAAATTTGTGTATATATTTCTCTAGATCGCGATTCCCTTTCGTTACAAAGTTAGGACTTGAATTACTCCCATTCTTAGGCTGAAGTCTTCGCTTATTTAGGACCAACTGTTCTTCGTAGGGTTTAAAGTTTTTAGATGGAAAATA 304 10839265 0.988364088 32 297 2794 0.980874317 2.254064453 0.163934426 0.174342105 0.31420765 304 6 1 359 2L:10839045-10839288 8 CG6700 FBtr0301710|FBtr0080187 10837858|10837730 10839315|10839315 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2L - 10839237 10839283 3'utr CG6700 FlyBase G7631.1 TGAAGCCCTATTCGATTTTGTACCTGATTTCCGAGCTTTTCGGATGT 116 10839265 0.699534517 11 113 1170 0.971428571 2.230448921 0.177142857 0.379310345 0.588571429 116 5 0 170 2L:10839237-10839283 8 137.5 13 FBgn0032305 1004.78 26.73333333 40.84666667 0.136845877 5.143391521 3.366247756 1 1 1 0.5 dme-miR-277-3p 8mer-A1 TGCATTTA 2L 10847252 10847259 - 2L_10847252_10847259_- 0.384370843 0.403531653 0.393951248 0.013548802 porin FBtr0080183|FBtr0305260 10847225|10847225 10847867|10847867 2L - 10847237 10847272 3'utr porin FlyBase G9878.1 TACCTTTTCGTTGTGCATTTACCTGAGAAATAAATC 26 10847255 0.730343129 3 26 191 1 1.602059991 0.275 0.346153846 0.575 26 0 0 40 2L:10847237-10847272 8 porin FBtr0305260|FBtr0080183 10847225|10847225 10847867|10847867 TGCATTTA 8mer-A1 dme-miR-277-3p 2L - 10847242 10847278 3'utr porin FlyBase G7636.1 AATCTTTACCTTTTCGTTGTGCATTTACCTGAGAAAT 17 10847255 0.742718784 3 17 139 1 1.361727836 0.347826087 0.352941176 0.52173913 17 0 0 23 2L:10847242-10847278 8 21.5 14 FBgn0004363 5030.653333 426.6133333 653.96 0.004273799 0.050396925 0.032876629 -4 -4 -4 0.5 dme-miR-8-3p 8mer-A1 CAGTATTA 2L 10989220 10989227 + 2L_10989220_10989227_+ 0.653309757 0.62865366 0.640981708 0.017434496 CG12253 FBtr0080149 10989166 10989241 2L + 10989204 10989232 3'utr CG12253 FlyBase G3994.1 TACAATTTGTAACTTTCAGTATTAAAATT 10 10989218 0.713310949 5 10 97 1 1.079181246 0 0.2 0.333333333 10 0 0 12 2L:10989204-10989232 8 CG12253 FBtr0080149 10989166 10989241 CAGTATTA 8mer-A1 dme-miR-8-3p 2L + 10989207 10989233 3'utr CG12253 FlyBase G3150.1 AATTTGTAACTTTCAGTATTAAAATTA 5 10989218 0.750055121 2 4 44 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2L:10989207-10989233 8 7.5 15 FBgn0026148 79.66666667 7.916666667 12.16 0.094142259 0.947368421 0.616776316 2 2 2 0.5 dme-miR-7-5p 8mer-A1 GTCTTCCA 2L 11013949 11013956 - 2L_11013949_11013956_- 0.420944652 0.582958702 0.501951677 0.114561198 Samuel FBtr0080161|FBtr0331197 11013204|11013204 11014199|11014199 2L - 11013943 11013978 3'utr Samuel FlyBase G9966.1 GAGAAACAACAATAATCGCAAAGTCTTCCATTTGCA 5 11013948 0.963936234 3 5 30 1 0.698970004 0.2 0 0 5 0 0 5 2L:11013943-11013978 8 Samuel FBtr0080161|FBtr0331197 11013204|11013204 11014199|11014199 GTCTTCCA 8mer-A1 dme-miR-7-5p 2L - 11013944 11013976 3'utr Samuel FlyBase G7699.1 GAAACAACAATAATCGCAAAGTCTTCCATTTGC 5 11013950 0.885494638 4 5 27 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 2L:11013944-11013976 8 5 16 FBgn0032330 367.82 9.873333333 15.09333333 0.013593606 0.506414585 0.331272085 -8 -6 -7 0.5 dme-miR-965-3p 6mer2-7 ACGCTT 2L 11095578 11095583 - 2L_11095578_11095583_- 0.933449475 0.597382224 0.765415849 0.237635467 Ge-1 FBtr0080232|FBtr0080231 11095148|11095351 11095687|11095687 2L - 11095563 11095603 3'utr Ge-1 FlyBase G9972.1 ACAAACACATTTATAAATACACGCTTGTAGTTAAGTCCAAA 9 11095586 0.849635666 3 8 73 0.888888889 0.903089987 0 0 0 9 1 0 8 2L:11095563-11095603 6 Ge-1 FBtr0080232|FBtr0080231 11095148|11095351 11095687|11095687 ACGCTT 6mer2-7 dme-miR-965-3p 2L - 11095520 11095601 3'utr Ge-1 FlyBase G7701.1 AAACACATTTATAAATACACGCTTGTAGTTAAGTCCAAAAAGAAGTTAGTATGCTAAAAAGCTCTCAGCTAAGTTCATCCCT 10 11095576 0.987074551 6 9 73 0.842105263 1.204119983 0 0.6 0.789473684 10 3 0 16 2L:11095520-11095601 6 8 17 FBgn0032340 1621.653333 39.62666667 60.70666667 0.004933237 0.201884253 0.131781243 3 -7 -2 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 1114826 1114831 - 2L_1114826_1114831_- 0.828596611 0.744891066 0.786743838 0.059188727 Pino FBtr0077988|FBtr0077988|FBtr0077988|FBtr0332272|FBtr0332272|FBtr0332272|FBtr0077987|FBtr0077987|FBtr0077987 1114652|1114652|1114652|1114652|1114652|1114652|1114652|1114652|1114652 1115733|1115733|1115733|1115733|1115733|1115733|1115733|1115733|1115733 2L - 1114722 1114932 3'utr Pino FlyBase G6741.1 TCTCCAAGGGAAAAGTGAAAGCGCATAGAAATGAGCAATTAAGGATGTGAAAACACGCACAAGGAAACAATTGAAAAGCATTACTCAAAGTTGAAGATTTTCTGTGAAAATCCATATGACATGTAGAAGTTTATACCTAATATATACACCTATATATTATATACCACATAAATCTGCATACAATATACATAAATATATATATATTTTTAAT 160 1114833 0.982222612 24 151 1135 0.952380952 1.77815125 0.142857143 0.15625 0.285714286 160 7 2 180 2L:1114722-1114932 6 Pino FBtr0077988|FBtr0077988|FBtr0077988|FBtr0332272|FBtr0332272|FBtr0332272|FBtr0077987|FBtr0077987|FBtr0077987 1114652|1114652|1114652|1114652|1114652|1114652|1114652|1114652|1114652 1115733|1115733|1115733|1115733|1115733|1115733|1115733|1115733|1115733 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 1114781 1114967 3'utr Pino FlyBase G5268.1 AGTGCTCAACAAAGTAACTACAGGATTGAACAATTTCTCCAAGGGAAAAGTGAAAGCGCATAGAAATGAGCAATTAAGGATGTGAAAACACGCACAAGGAAACAATTGAAAAGCATTACTCAAAGTTGAAGATTTTCTGTGAAAATCCATATGACATGTAGAAGTTTATACCTAATATATACACCTA 87 1114834 0.984882169 26 77 623 0.888 1.142232992 0.112 0.356321839 0.552 87 7 7 111 2L:1114781-1114967 6 53 18 FBgn0016926 853.46 50.28 77.25 0.062100157 1.054097056 0.686084142 2 3 2.5 0.5 dme-miR-14-3p 7mer-m8 AAGACTG 2L 11180259 11180265 + 2L_11180259_11180265_+ 0.557296331 0.573187694 0.565242012 0.011236917 CG4788 FBtr0080202 11179989 11180430 2L + 11180237 11180278 3'utr CG4788 FlyBase G4104.1 ACATAGATGTTTTCAAACAATTAAGACTGGAAAAATACAAAA 11 11180257 0.95103807 2 10 47 1 1.146128036 0.071428571 0.090909091 0.285714286 11 0 0 14 2L:11180237-11180278 7 CG4788 FBtr0080202 11179989 11180430 AAGACTG 7mer-m8 dme-miR-14-3p 2L + 11180239 11180272 3'utr CG4788 FlyBase G3217.1 ATAGATGTTTTCAAACAATTAAGACTGGAAAAAT 9 11180257 0.808056068 3 7 55 0.8 0.903089987 0 0.111111111 0.2 9 2 0 8 2L:11180239-11180272 7 9.5 19 FBgn0032354 97.66666667 9.44 14.38333333 0.097269625 1.006355932 0.660486674 2 2 2 0.5 dme-miR-1008-3p 6mer2-7 GCTGTG 2L 113734 113739 + 2L_113734_113739_+ 0.7539781 0.710767009 0.732372554 0.030554862 Sam-S FBtr0330656|FBtr0089429|FBtr0089431|FBtr0089430|FBtr0089436|FBtr0089434|FBtr0089435|FBtr0089437|FBtr0089432|FBtr0089428|FBtr0089433 112780|113541|113541|113541|113541|113541|113541|113541|113541|112740|113541 114432|114432|114432|114432|114210|114432|114432|114432|114210|114210|114432 2L + 113694 113904 3'utr Sam-S FlyBase G461.2 TAGGCTTGCCAACTCTTATGGGCTTTCTTCTCTAACTTATGCTGTGCTCTTCGCTATATAATTTAAACCATTCTGATGTGTGTAGTCTTCTCACACGGAACTAGTTTTAGTCGTCTTAATACCCGCATATATACCTAATAGAGAGCTCCAAAAGAATTGATGAGCTTTAGTTATGCATATACATAGTATAGTGTCGGTCAGTTCAGTAAAA 148 113733 0.951739125 30 141 1345 0.947674419 1.610127613 0.13372093 0.162162162 0.279069767 148 6 3 163 2L:113694-113904 6 Sam-S FBtr0089433|FBtr0089432|FBtr0089428|FBtr0089437|FBtr0089435|FBtr0089434|FBtr0089436|FBtr0089430|FBtr0089431|FBtr0089429|FBtr0330656 113541|113541|112740|113541|113541|113541|113541|113541|113541|113541|112780 114432|114210|114210|114432|114432|114432|114210|114432|114432|114432|114432 GCTGTG 6mer2-7 dme-miR-1008-3p 2L + 113675 113877 3'utr Sam-S FlyBase G387.2 GTCAGAGGAGAAGGCGGCATAGGCTTGCCAACTCTTATGGGCTTTCTTCTCTAACTTATGCTGTGCTCTTCGCTATATAATTTAAACCATTCTGATGTGTGTAGTCTTCTCACACGGAACTAGTTTTAGTCGTCTTAATACCCGCATATATACCTAATAGAGAGCTCCAAAAGAATTGATGAGCTTTAGTTATGCATATACAT 79 113733 0.939056871 21 71 694 0.896551724 1.716003344 0.137931034 0.316455696 0.534482759 79 11 1 104 2L:113675-113877 6 45 20 FBgn0005278 1886.66 102.5866667 157.21 0.023851674 0.438653496 0.286241333 1 1 1 0.5 dme-miR-14-3p 7mer-m8 AAGACTG 2L 1166384 1166390 + 2L_1166384_1166390_+ 0.658476564 0.65190297 0.655189767 0.004648237 IntS14 FBtr0077962 1166360 1166425 2L + 1166372 1166405 3'utr IntS14 FlyBase G990.1 TGTCCTTACTTTAAGACTGTGTTTACTTTGTAAT 6 1166381 0.895502368 5 6 63 1 0.903089987 0 0.166666667 0.375 6 0 0 8 2L:1166372-1166405 7 IntS14 FBtr0077962 1166360 1166425 AAGACTG 7mer-m8 dme-miR-14-3p 2L + 1166367 1166408 3'utr IntS14 FlyBase G793.1 TTTTATGTCCTTACTTTAAGACTGTGTTTACTTTGTAATACA 7 1166391 0.987049466 4 7 78 1 1.176091259 0 0.571428571 0.8 7 0 0 15 2L:1166367-1166408 7 6.5 21 FBgn0031314 268.3333333 16.95333333 25.93333333 0.024223602 0.383405427 0.250642674 3 -7 -2 0.5 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 11810369 11810376 - 2L_11810369_11810376_- 0.60750763 0.57846293 0.59298528 0.020537704 CycY FBtr0333425 11810090 11811116 2L - 11810365 11810420 3'utr CycY FlyBase G10151.1 AATAACTCAATATGATTTCGTGTGATTCTTATATAGTTTCCATTTAGCTTTATATA 20 11810377 0.820306031 5 20 206 1 1.380211242 0.083333333 0.15 0.291666667 20 0 0 24 2L:11810365-11810420 8 CycY FBtr0333425 11810090 11811116 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 11810365 11810420 3'utr CycY FlyBase G7830.1 AATAACTCAATATGATTTCGTGTGATTCTTATATAGTTTCCATTTAGCTTTATATA 25 11810377 0.779495814 6 25 256 1 1.491361694 0.064516129 0.2 0.35483871 25 0 0 31 2L:11810365-11810420 8 14 22 FBgn0032378 829.4 43.03666667 66.07 0.016879672 0.325304004 0.211896473 1 1 1 0.5 dme-miR-31a-5p 6mer2-7 CTTGCC 2L 1181655 1181660 + 2L_1181655_1181660_+ 0.467292755 0.656021369 0.561657062 0.133451273 CG4896 FBtr0335394|FBtr0335395|FBtr0308698 1179902|1179230|1179230 1182454|1182454|1182454 2L + 1181586 1181662 3'utr CG4896 FlyBase G1009.1 TTGAAGCTAGCGTTGGGACTAAACGAGCCATTAGCGATGAATCTGACTACGTGGACTTCCAAAAACTTACTTGCCTG 14 1181639 0.799321 10 12 69 0.888888889 1.204119983 0.277777778 0.285714286 0.444444444 14 2 0 16 2L:1181586-1181662 6 CG4896 FBtr0308698|FBtr0335394|FBtr0335395 1179230|1179902|1179230 1182454|1182454|1182454 CTTGCC 6mer2-7 dme-miR-31a-5p 2L + 1181627 1181672 3'utr CG4896 FlyBase G803.1 TCTGACTACGTGGACTTCCAAAAACTTACTTGCCTGCTCTGCATGC 8 1181654 0.755305304 5 7 48 0.846153846 1.041392685 0 0.375 0.615384615 8 2 0 11 2L:1181627-1181672 6 5.5 23 FBgn0031319 314.3566667 11.06666667 17.08 0.01749605 0.496987952 0.322014052 16 1 8.5 0.5 dme-miR-276a-3p 8mer-A1 AGTTCCTA 2L 11827385 11827392 - 2L_11827385_11827392_- 0.631566356 0.532390385 0.58197837 0.070128022 esc FBtr0080325 11827202 11827459 2L - 11827335 11827448 5'utr esc FlyBase G10163.1 GGCGCAACCACAAACCAAATCTCACGTGGCCAAAACTTACAACATTTCCCTCAATTAGTTCCTAGTTGGTTAGCATTAAGATATAGAATTACGCTCCTGTGCTGTTCCAAATTA 83 11827403 0.988596207 15 76 710 0.911111111 1.612783857 0.044444444 0.084337349 0.155555556 83 7 1 82 2L:11827335-11827448 8 esc FBtr0080325 11827202 11827459 AGTTCCTA 8mer-A1 dme-miR-276a-3p 2L - 11827336 11827422 5'utr esc FlyBase G7840.1 TGGCCAAAACTTACAACATTTCCCTCAATTAGTTCCTAGTTGGTTAGCATTAAGATATAGAATTACGCTCCTGTGCTGTTCCAAATT 49 11827403 0.769280404 7 42 388 0.869565217 1.477121255 0.043478261 0.326530612 0.52173913 49 8 1 60 2L:11827336-11827422 8 34 24 FBgn0000588 215.62 15.44 23.56 0.157684816 2.202072539 1.443123939 11 11 11 0.5 dme-miR-1006-3p 8mer-A1 CGAATTTA 2L 12045681 12045688 - 2L_12045681_12045688_- 0.600546502 0.607703533 0.604125018 0.005060763 CG6770 FBtr0080306 12045341 12045765 2L - 12045668 12045787 stop_codon CG6770 FlyBase G10211.2 AGCCGCCGCCTGCAAGAACTGATGCAGGGCATCGACGGAGGCGGTGGAACAGGAGAGAAAGAAGTAACGGGGCCGCGCTGAAAGGAGAAAAGAAATCTTCGAATTTAAAAGGAAAGCAAA 122 12045689 0.979955211 8 116 547 0.951048951 2.133538908 0.181818182 0.163934426 0.286713287 122 7 0 136 2L:12045668-12045787 8 CG6770 FBtr0080306 12045341 12045765 CGAATTTA 8mer-A1 dme-miR-1006-3p 2L - 12045670 12045740 3'utr CG6770 FlyBase G7878.1 AACAGGAGAGAAAGAAGTAACGGGGCCGCGCTGAAAGGAGAAAAGAAATCTTCGAATTTAAAAGGAAAGCA 67 12045689 0.959389796 5 65 316 0.97826087 1.954242509 0.097826087 0.268656716 0.467391304 67 2 0 90 2L:12045670-12045740 8 84.5 25 FBgn0032400 867.8766667 144.29 222.0833333 0.097364065 0.58562617 0.380487805 1 1 1 0.5 dme-miR-92b-3p 8mer-m1 GTGCAATT 2L 12100671 12100678 + 2L_12100671_12100678_+ 0.441177654 0.579523438 0.510350546 0.097825183 Ced-12 FBtr0080330 12100540 12100839 2L + 12100627 12100697 3'utr Ced-12 FlyBase G4189.1 AACATAATCGTATTCTCCGATCTGATCTTCTACTAGTATTACTTGTGCAATTCCCCGAACACAAAATGAAC 38 12100649 0.989470837 11 37 354 0.977777778 1.643452676 0.2 0.184210526 0.311111111 38 1 0 44 2L:12100627-12100697 8 Ced-12 FBtr0080330 12100540 12100839 GTGCAATT 8mer-m1 dme-miR-92b-3p 2L + 12100627 12100693 3'utr Ced-12 FlyBase G3274.1 AACATAATCGTATTCTCCGATCTGATCTTCTACTAGTATTACTTGTGCAATTCCCCGAACACAAAAT 28 12100649 0.989335581 12 24 238 0.846153846 1.51851394 0.384615385 0.392857143 0.564102564 28 6 0 33 2L:12100627-12100693 8 17 26 FBgn0032409 609.2533333 28.43666667 43.38333333 0.027903007 0.597819716 0.391855551 22 22 22 0.5 dme-miR-317-3p 8mer-A1 TGTGTTCA 2L 12107651 12107658 - 2L_12107651_12107658_- 0.553076691 0.554839536 0.553958113 0.001246488 Rab6 FBtr0346437|FBtr0080361 12107219|12107285 12108172|12108172 2L - 12107636 12107688 3'utr Rab6 FlyBase G10240.1 CCAGCAGTCGTAGATACCACGCAGCCAGTCTGTGTTCAATGATTCCACCAGCC 63 12107659 0.828854345 9 58 416 0.943661972 1.826074803 0.183098592 0.111111111 0.211267606 63 4 0 67 2L:12107636-12107688 8 Rab6 FBtr0346437|FBtr0080361 12107219|12107285 12108172|12108172 TGTGTTCA 8mer-A1 dme-miR-317-3p 2L - 12107626 12107690 3'utr Rab6 FlyBase G7902.1 CTCCAGCAGTCGTAGATACCACGCAGCCAGTCTGTGTTCAATGATTCCACCAGCCAGGCATTTTG 26 12107659 0.97817345 8 24 159 0.941176471 1.505149978 0.205882353 0.269230769 0.441176471 26 2 0 32 2L:12107626-12107690 8 38 27 FBgn0015797 1477.666667 97.91333333 149.3266667 0.025716219 0.388098318 0.254475646 1 1 1 0.5 dme-miR-184-3p 8mer-A1 TCCGTCCA 2L 12173897 12173904 + 2L_12173897_12173904_+ 0.614376246 0.614495271 0.614435758 8.42E-05 crok FBtr0080342 12173602 12174091 2L + 12173829 12173970 3'utr crok FlyBase G4207.1 GAGCGATGTGTAATCAAGTGCCTTTTCTGTAACGGACTCGTATTGTAACTTAAGCCTGGAATACTATTTCCGTCCAAAAAATATCTTACGCCTATGACATTCCATCTCGTAAACTGAATCTTGTAATACTTTCTATTTTCTA 765 12173896 0.979153126 20 743 5110 0.973952435 2.633468456 0.005662514 0.130718954 0.246885617 765 22 1 860 2L:12173829-12173970 8 crok FBtr0080342 12173602 12174091 TCCGTCCA 8mer-A1 dme-miR-184-3p 2L + 12173828 12173960 3'utr crok FlyBase G3289.1 TGAGCGATGTGTAATCAAGTGCCTTTTCTGTAACGGACTCGTATTGTAACTTAAGCCTGGAATACTATTTCCGTCCAAAAAATATCTTACGCCTATGACATTCCATCTCGTAAACTGAATCTTGTAATACTTT 477 12173896 0.978275238 23 460 3084 0.958333333 2.139879086 0.005555556 0.368972746 0.581944444 477 26 4 690 2L:12173828-12173960 8 568.5 28 FBgn0032421 76 9.133333333 13.88666667 7.480263158 62.24452555 40.93855017 1 1 1 0.5 dme-miR-1002-5p 8mer-A1 CTACTTAA 2L 12440481 12440488 + 2L_12440481_12440488_+ 0.372226781 0.382755322 0.377491051 0.007444774 Elf FBtr0333089|FBtr0080369|FBtr0344859|FBtr0333090 12439563|12439563|12439563|12439563 12441279|12440602|12440602|12440602 2L + 12440460 12440491 3'utr Elf FlyBase G4236.1 ATTTAAAACCATTTGATTTTGCTACTTAAAAC 6 12440479 0.956390759 3 6 51 1 0.903089987 0 0.166666667 0.375 6 0 0 8 2L:12440460-12440491 8 Elf FBtr0344859|FBtr0333090|FBtr0333089|FBtr0080369 12439563|12439563|12439563|12439563 12440602|12440602|12441279|12440602 CTACTTAA 8mer-A1 dme-miR-1002-5p 2L + 12440464 12440498 3'utr Elf FlyBase G3315.1 AAAACCATTTGATTTTGCTACTTAAAACACATTTG 5 12440479 0.976572703 2 4 39 1 0.77815125 0.333333333 0.2 0.333333333 5 0 0 6 2L:12440464-12440498 8 5.5 29 FBgn0020443 5168.45 195.0133333 300.5566667 0.001064149 0.0282032 0.018299378 2 2 2 0.5 dme-miR-970-3p 8mer-A1 TCTTATGA 2L 12452005 12452012 - 2L_12452005_12452012_- 0.488417162 0.425415854 0.456916508 0.044548646 CG5418 FBtr0080382 12451943 12452060 2L - 12451966 12452021 3'utr CG5418 FlyBase G10276.1 TTTAATTGTTCTTATGATTTGTCTTGGCACATTGGATCGATCTTAAGTTTACGAAT 10 12452012 0.9944873 6 9 113 0.833333333 1 0.083333333 0.2 0.333333333 10 2 0 10 2L:12451966-12452021 8 CG5418 FBtr0080382 12451943 12452060 TCTTATGA 8mer-A1 dme-miR-970-3p 2L - 12451972 12452029 3'utr CG5418 FlyBase G7931.1 AGAATAACTTTAATTGTTCTTATGATTTGTCTTGGCACATTGGATCGATCTTAAGTTT 8 12452010 0.988322705 7 8 81 1 1 0.3 0.125 0.3 8 0 0 10 2L:12451972-12452029 8 5.5 30 FBgn0032436 3.666666667 0.376666667 0.583333333 1.5 14.60176991 9.428571429 0 -2 -1 0.5 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 13001290 13001297 - 2L_13001290_13001297_- 0.608196633 0.620598087 0.61439736 0.008769185 Vha68-1 FBtr0080429|FBtr0336618 13000768|13000963 13001411|13001411 2L - 13001280 13001347 3'utr Vha68-1 FlyBase G10383.1 AAACGAAATAAGAAACCAAAGCTAGGTTATTATTCGAATTCCCCATTCAATCTAGTCATATTTACATA 15 13001299 0.990715221 5 13 131 0.866666667 0.812913357 0.133333333 0 0 15 1 1 13 2L:13001280-13001347 8 Vha68-1 FBtr0336618|FBtr0080429 13000963|13000768 13001411|13001411 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 13001260 13001312 3'utr Vha68-1 FlyBase G8028.1 GAATTCCCCATTCAATCTAGTCATATTTACATAATGCATAATAAGATATTTGA 9 13001298 0.993367954 5 7 83 0.75 0.653212514 0.083333333 0.333333333 0.5 9 2 1 9 2L:13001260-13001312 8 10.5 31 FBgn0265262 180.4566667 8.25 12.47 0.058185714 1.272727273 0.84202085 2 1 1.5 0.5 dme-miR-92b-3p 6mer2-7 TGCAAT 2L 13022627 13022632 - 2L_13022627_13022632_- 0.781031311 0.977102914 0.879067113 0.138643558 CG9932 FBtr0310277|FBtr0336617 13021866|13021866 13023322|13023322 2L - 13022604 13022654 3'utr CG9932 FlyBase G10414.1 AAGAAAGTGAGCGCGTATATCATGCAATGAATATGGTACTATATACATACT 24 13022636 0.66228318 6 23 124 0.965517241 1.447158031 0.344827586 0.166666667 0.310344828 24 1 0 28 2L:13022604-13022654 6 CG9932 FBtr0336617|FBtr0310277 13021866|13021866 13023322|13023322 TGCAAT 6mer2-7 dme-miR-92b-3p 2L - 13022601 13022652 3'utr CG9932 FlyBase G8054.1 GAAAGTGAGCGCGTATATCATGCAATGAATATGGTACTATATACATACTATA 19 13022635 0.979678543 6 15 106 0.740740741 1.301029996 0.481481481 0.315789474 0.518518519 19 7 0 20 2L:13022601-13022652 6 20.5 32 FBgn0262160 822.2633333 11.45 17.61 0.024931186 1.790393013 1.1641113 4 3 3.5 0.5 dme-miR-2a-2-5p 8mer-A1 TGATGAGA 2L 13376051 13376058 + 2L_13376051_13376058_+ 0.560053952 0.571050513 0.565552233 0.0077757 CG6565 FBtr0080468|FBtr0346420|FBtr0342631 13375839|13375839|13375839 13376165|13376404|13376165 2L + 13375998 13376072 3'utr CG6565 FlyBase G4433.1 TCAGAGCAAGTGTGCAATAGGTGGAAGTTTTGCTCTTAACATGAGTGCCACTTTGATGAGAAACTTAAAAATAAA 9 13376050 0.976265819 6 8 49 0.888888889 0.903089987 0.111111111 0 0 9 1 0 8 2L:13375998-13376072 8 CG6565 FBtr0342631|FBtr0080468|FBtr0346420 13375839|13375839|13375839 13376165|13376165|13376404 TGATGAGA 8mer-A1 dme-miR-2a-2-5p 2L + 13376016 13376062 3'utr CG6565 FlyBase G3445.1 AGGTGGAAGTTTTGCTCTTAACATGAGTGCCACTTTGATGAGAAACT 8 13376050 0.978307487 4 7 48 1 1.113943352 0 0.5 0.692307692 8 0 0 13 2L:13376016-13376062 8 6 33 FBgn0032513 608.7166667 34.34 52.78 0.009856803 0.174723355 0.113679424 1 1 1 0.5 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2L 13502806 13502812 - 2L_13502806_13502812_- 0.4736551 0.383620881 0.428637991 0.063663793 B4 FBtr0332509|FBtr0080514|FBtr0080513 13500622|13502654|13502654 13504503|13504503|13504503 2L - 13502752 13502841 3'utr B4 FlyBase G10603.1 AAGTAGAGTTTAGACACTAAGGTCCAGTTTCTAGTCTTAATTTGAAAACAAATATGAAGCCGTTTCGAAATGGAGACATGCCAAACTTTT 61 13502813 0.952635164 6 58 479 0.974025974 1.875061263 0.077922078 0.229508197 0.38961039 61 2 0 75 2L:13502752-13502841 7 B4 FBtr0080513|FBtr0332509|FBtr0080514 13502654|13500622|13502654 13504503|13504503|13504503 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2L - 13502793 13502840 3'utr B4 FlyBase G8172.1 AGTAGAGTTTAGACACTAAGGTCCAGTTTCTAGTCTTAATTTGAAAAC 45 13502813 0.73558114 2 44 376 0.983606557 1.77815125 0.06557377 0.333333333 0.508196721 45 1 0 60 2L:13502793-13502840 7 48 34 FBgn0023407 923.55 17.94 27.61666667 0.051973364 2.675585284 1.738080869 1 1 1 0.5 dme-miR-986-5p 6mer3-8 ATTCGA 2L 13773534 13773539 + 2L_13773534_13773539_+ 0.46232473 0.782138098 0.622231414 0.226142224 TM9SF4 FBtr0343657|FBtr0080532 13773482|13773482 13773905|13773905 2L + 13773453 13773550 stop_codon TM9SF4 FlyBase G4524.1 AAGAATCTACGGAGCTGTGAAGATCGACTAAGCTGTGTCACCCACTCGTCACGCTGTACACCAAACTATCCTTGCAATATCATTCGATCATAAATATA 27 13773524 0.98178056 12 26 189 0.96875 1.491361694 0.0625 0.185185185 0.3125 27 1 0 31 2L:13773453-13773550 6 TM9SF4 FBtr0343657|FBtr0080532 13773482|13773482 13773905|13773905 ATTCGA 6mer3-8 dme-miR-986-5p 2L + 13773453 13773587 stop_codon TM9SF4 FlyBase G3514.1 AAGAATCTACGGAGCTGTGAAGATCGACTAAGCTGTGTCACCCACTCGTCACGCTGTACACCAAACTATCCTTGCAATATCATTCGATCATAAATATATTTATAGAGCAACTGAACCCAGTCTCGTCCAGCTGCA 22 13773524 0.803947929 14 21 133 0.971428571 1.531478917 0.285714286 0.363636364 0.6 22 1 0 34 2L:13773453-13773587 6 9 35 FBgn0028541 781.57 38.32 58.46 0.011515283 0.234864301 0.15395142 10 10 10 0.5 dme-miR-184-5p 8mer-m1 TGATAAGG 2L 13819398 13819405 + 2L_13819398_13819405_+ 0.407795558 0.423250869 0.415523214 0.010928547 Sos FBtr0080541 13819377 13819824 2L + 13819333 13819416 lincRNA_intron-lincRNA_exon Sos FlyBase G4579.1 AGATAAAGGTACGATGTTTCTTTACCCAAGTACAAACGAAGAATAATTTAAATTGCCTGGCGATGTGATAAGGACGAAAACTAC 33 13819387 0.974682324 9 29 191 0.868421053 1.041392685 0.368421053 0.151515152 0.263157895 33 3 2 33 2L:13819333-13819416 8 Sos FBtr0080541 13819377 13819824 TGATAAGG 8mer-m1 dme-miR-184-5p 2L + 13819377 13819409 stop_codon Sos FlyBase G3558.1 AATTTAAATTGCCTGGCGATGTGATAAGGACGA 10 13819388 0.701574928 6 9 49 0.75 1.079181246 0.5625 0.3 0.5625 10 4 0 12 2L:13819377-13819409 8 15 36 FBgn0001965 887.1 19.05333333 29.30333333 0.016909029 0.787263821 0.511887157 11 10 10.5 0.5 dme-miR-14-3p 6mer2-7 AGACTG 2L 14184939 14184944 - 2L_14184939_14184944_- 0.801417248 0.885035681 0.843226464 0.059127208 Dyrk2 FBtr0089290|FBtr0089289|FBtr0329933|FBtr0100448|FBtr0100447 14184476|14184476|14184476|14184476|14184476 14186137|14186137|14186065|14186137|14186137 2L - 14184927 14185000 3'utr Dyrk2 FlyBase G10700.1 AAGACGGCAGACAGTTTGATATGAACTTGAGCTGGGTAAGATTGCTTACCAAATCCAGACTGTAATTTGAACGA 9 14184947 0.97246596 6 9 57 1 1.041392685 0.545454545 0.222222222 0.363636364 9 0 0 11 2L:14184927-14185000 6 Dyrk2 FBtr0100447|FBtr0100448|FBtr0329933|FBtr0089289|FBtr0089290 14184476|14184476|14184476|14184476|14184476 14186137|14186137|14186065|14186137|14186137 AGACTG 6mer2-7 dme-miR-14-3p 2L - 14184910 14184968 3'utr Dyrk2 FlyBase G8244.1 TGGGTAAGATTGCTTACCAAATCCAGACTGTAATTTGAACGAAGTTTGTAACCTGTAAT 13 14184935 0.906287318 7 12 84 0.888888889 1.204119983 0.277777778 0.307692308 0.5 13 2 0 16 2L:14184910-14184968 6 7.5 37 FBgn0016930 948.1733333 27.29666667 41.49333333 0.007909946 0.274758823 0.180751928 3 -9 -3 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2L 14327834 14327839 + 2L_14327834_14327839_+ 0.589979224 0.508483388 0.549231306 0.057626233 wb FBtr0302732|FBtr0302732|FBtr0302732|FBtr0302734|FBtr0302734|FBtr0302734|FBtr0302731|FBtr0302731|FBtr0302731|FBtr0302733|FBtr0302733|FBtr0302733|FBtr0302735|FBtr0302735|FBtr0302735 14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750 14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262 2L + 14327814 14327918 3'utr wb FlyBase G4602.2 AAAACTTTTTCCAAATGTATTGTGATCAATAACGAGTTTAGAGCCACCTATTTATAGCCCTTCACTGCCATATAAGTTAGGTTACTGTAGGATTAGCTTTGAATG 113 14327833 0.861015229 16 103 969 0.916030534 1.602059991 0.083969466 0.123893805 0.244274809 113 9 2 120 2L:14327814-14327918 6 wb FBtr0302731|FBtr0302731|FBtr0302731|FBtr0302732|FBtr0302732|FBtr0302732|FBtr0302734|FBtr0302734|FBtr0302734|FBtr0302733|FBtr0302733|FBtr0302733|FBtr0302735|FBtr0302735|FBtr0302735 14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750|14327750 14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262|14328262 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 14327782 14327860 3'utr wb FlyBase G3573.1 CGGGCGCATCTGGTTCCTGTTGACGCCACACCAAAACTTTTTCCAAATGTATTGTGATCAATAACGAGTTTAGAGCCAC 45 14327833 0.991308004 8 34 361 0.768115942 0.87917783 0 0.4 0.608695652 45 10 6 53 2L:14327782-14327860 6 49 38 FBgn0261563 1083 12.21333333 18.64 0.045244691 4.012008734 2.628755365 1 1 1 0.5 dme-miR-2b-2-5p 6mer3-8 TTGAAG 2L 14345611 14345616 + 2L_14345611_14345616_+ 0.74761193 0.663892319 0.705752124 0.059198697 CG33090 FBtr0343673|FBtr0343675|FBtr0080624|FBtr0343674 14345339|14345339|14345339|14345339 14345795|14345795|14345790|14345790 2L + 14345575 14345676 3'utr CG33090 FlyBase G4610.1 TTTAAAGCCAGTCACAAATCAAACTGCTACTCTCTGTTGAAGTACAACTACGCAATGGTATTCAAATGGAGCACAAGTCGTATTTAGATGTTAGCTAAGAGA 18 14345612 0.973984384 10 18 113 1 1.342422681 0.272727273 0.166666667 0.318181818 18 0 0 22 2L:14345575-14345676 6 CG33090 FBtr0343674|FBtr0080624|FBtr0343675|FBtr0343673 14345339|14345339|14345339|14345339 14345790|14345790|14345795|14345795 TTGAAG 6mer3-8 dme-miR-2b-2-5p 2L + 14345562 14345626 3'utr CG33090 FlyBase G3580.1 TGTCTTCTCTAGCTTTAAAGCCAGTCACAAATCAAACTGCTACTCTCTGTTGAAGTACAACTACG 6 14345612 0.983750357 4 4 32 0.8 0.903089987 0.5 0.333333333 0.6 6 2 0 8 2L:14345562-14345626 6 6 39 FBgn0028916 435.3333333 15.55666667 24.00333333 0.013782542 0.385686737 0.249965283 -1 -1 -1 0.5 dme-miR-988-3p 6mer3-8 ACAAGG 2L 14365390 14365395 + 2L_14365390_14365395_+ 0.602758316 0.982641753 0.792700035 0.268618199 spel1 FBtr0309281|FBtr0080630 14365229|14365229 14366840|14365568 2L + 14365340 14365416 5'utr spel1 FlyBase G4638.1 ACTGAATATTGCTCATCCATGGTTACAAACCATATTCTCCTGATTTGATTACAAGGCTACATCGAAAATGTTGTTTA 22 14365374 0.83156888 9 20 174 0.92 1.361727836 0.28 0.136363636 0.24 22 2 0 23 2L:14365340-14365416 6 spel1 FBtr0080630|FBtr0309281 14365229|14365229 14365568|14366840 ACAAGG 6mer3-8 dme-miR-988-3p 2L + 14365340 14365401 5'utr spel1 FlyBase G3596.1 ACTGAATATTGCTCATCCATGGTTACAAACCATATTCTCCTGATTTGATTACAAGGCTACAT 11 14365374 0.979894701 6 10 78 1 1.301029996 0.1 0.636363636 0.8 11 0 0 20 2L:14365340-14365401 6 4 40 FBgn0015546 654.7233333 24.05333333 36.85 0.006109451 0.166297118 0.108548168 16 16 16 0.5 dme-miR-317-3p 8mer-A1 TGTGTTCA 2L 15011511 15011518 + 2L_15011511_15011518_+ 0.491247319 0.510319474 0.500783396 0.013486082 l(2)35Bd FBtr0080696 15011357 15011764 2L + 15011502 15011532 3'utr l(2)35Bd FlyBase G4656.1 ATGTTTGTTTGTGTTCATAGGTTTCAATTCA 45 15011510 0.73910665 3 45 557 1 1.698970004 0.08 0.111111111 0.2 45 0 0 50 2L:15011502-15011532 8 l(2)35Bd FBtr0080696 15011357 15011764 TGTGTTCA 8mer-A1 dme-miR-317-3p 2L + 15011500 15011531 3'utr l(2)35Bd FlyBase G3606.1 GTATGTTTGTTTGTGTTCATAGGTTTCAATTC 31 15011510 0.725946935 4 31 379 1 1.72427587 0.037735849 0.483870968 0.698113208 31 0 0 53 2L:15011500-15011531 8 38 41 FBgn0001974 148.6633333 10.34 15.90666667 0.255611112 3.675048356 2.388935457 1 1 1 0.5 dme-miR-1012-3p 7mer-A1 TGACTAA 2L 15504068 15504074 + 2L_15504068_15504074_+ 0.442341908 0.727757073 0.58504949 0.201819023 lace FBtr0343735|FBtr0080738 15503914|15503914 15504591|15505018 2L + 15503931 15504149 3'utr lace FlyBase G4694.1 CATAGAAGTTAAGCTTGGGGAAATGGTAACCTCCCCGATTGGTAAACCAAAACTACAACACAGTCCAGATAGTGCTAAATCAATCACGAACGGTGGCTTACATTGACCAAGTTTCAGTTGCACTGGGCTTCTATTTATGACTAATTCTCTGGTTATATGCCTTAAAAGGGAAGATCACTACAGCAACAGAAACAAAACACTACAGCACATAGCTTAAAT 64 15504080 0.98263667 26 61 453 0.961038961 1.568201724 0.155844156 0.171875 0.311688312 64 2 1 74 2L:15503931-15504149 7 lace FBtr0343735|FBtr0080738 15503914|15503914 15504591|15505018 TGACTAA 7mer-A1 dme-miR-1012-3p 2L + 15503926 15504103 3'utr lace FlyBase G3637.1 ACACACATAGAAGTTAAGCTTGGGGAAATGGTAACCTCCCCGATTGGTAAACCAAAACTACAACACAGTCCAGATAGTGCTAAATCAATCACGAACGGTGGCTTACATTGACCAAGTTTCAGTTGCACTGGGCTTCTATTTATGACTAATTCTCTGGTTATATGCCTTAAAAGGGAAG 33 15504046 0.853527746 24 33 196 1 1.672097858 0.14893617 0.363636364 0.553191489 33 0 0 47 2L:15503926-15504103 7 12 42 FBgn0002524 4527.636667 202.88 309.75 0.002650389 0.059148265 0.03874092 -12 22 5 0.5 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 15727656 15727663 - 2L_15727656_15727663_- 0.41754796 0.423385717 0.420466838 0.004127877 CycE FBtr0080777|FBtr0080776|FBtr0080773 15727579|15727579|15727579 15728880|15728880|15728880 2L - 15727607 15727688 3'utr CycE FlyBase G10821.1 ATTTAATTTTAAATAATTTCAGAACTACGCTTATATCCATGATTTGATGTTAATAAATAAACGATCGCAAAATCGTAAACTA 23 15727663 0.975729288 8 23 158 1 1.544068044 0.028571429 0.391304348 0.6 23 0 0 35 2L:15727607-15727688 8 CycE FBtr0080776|FBtr0080773|FBtr0080777 15727579|15727579|15727579 15728880|15728880|15728880 TACGCTTA 8mer-A1 dme-miR-965-3p 2L - 15727638 15727674 3'utr CycE FlyBase G8325.1 AATTTCAGAACTACGCTTATATCCATGATTTGATGTT 9 15727663 0.960119302 4 8 60 1 0.954242509 0.111111111 0 0 9 0 0 9 2L:15727638-15727674 8 14 43 FBgn0010382 855.2666667 26.80666667 41.17666667 0.016369164 0.522258145 0.339998381 0 0 0 0.5 dme-miR-317-3p 7mer-A1 GTGTTCA 2L 15727818 15727824 - 2L_15727818_15727824_- 0.647017362 0.822706547 0.734861954 0.124230954 CycE FBtr0080775|FBtr0080777|FBtr0080774|FBtr0080776|FBtr0305561|FBtr0080773 15727782|15727579|15727782|15727579|15727782|15727579 15728880|15728880|15728880|15728880|15728880|15728880 2L - 15727797 15727852 3'utr CycE FlyBase G10822.1 CGTTAGCTTAGGCATAAATAACATGTAAGTGTTCATACGATTAAGGCTGGATTGAA 14 15727813 0.67459831 7 11 88 0.8125 0.812913357 0.0625 0.142857143 0.25 14 2 1 13 2L:15727797-15727852 7 CycE FBtr0080774|FBtr0080776|FBtr0305561|FBtr0080773|FBtr0080775|FBtr0080777 15727782|15727579|15727782|15727579|15727782|15727579 15728880|15728880|15728880|15728880|15728880|15728880 GTGTTCA 7mer-A1 dme-miR-317-3p 2L - 15727799 15727843 3'utr CycE FlyBase G8326.1 AGGCATAAATAACATGTAAGTGTTCATACGATTAAGGCTGGATTG 20 15727828 0.791528631 8 13 140 0.68 1.230448921 0.24 0.2 0.36 20 8 0 17 2L:15727799-15727843 7 15 44 FBgn0010382 855.2666667 26.80666667 41.17666667 0.01753839 0.559562298 0.36428398 -11 4 -3.5 0.5 dme-miR-278-3p 6mer3-8 CCCACC 2L 16247046 16247051 - 2L_16247046_16247051_- 0.772904766 0.651689941 0.712297354 0.085711878 PRL-1 FBtr0332358|FBtr0080856|FBtr0080857|FBtr0332357 16245833|16245833|16245833|16245833 16247074|16247074|16247074|16247074 2L - 16246892 16247134 stop_codon PRL-1 FlyBase G10856.1 AAGCCAAAGGCGAGACTAAAGCACAAAAATGGTCATAAGAATTCATGTTCTGTGCAATAGATTTCCAACACCATATGTATATTCCCACCAGACAAAAAGTGTTCATTTTTTCAAAAACAAAAAAAAAAAATGCAAGCGGATAGAAAAGCGCATACACAAATATGAATTGATAGGCAGCAATCCGTAAAATTGAACTAACCACAGAGAGCCCAAAAATATGGAAGGAGAAATTGAGTTACAGCC 175 16247053 0.98599814 31 153 1335 0.874371859 1.939519253 0.08040201 0.125714286 0.231155779 175 24 1 174 2L:16246892-16247134 6 PRL-1 FBtr0332357|FBtr0080857|FBtr0080856|FBtr0332358 16245833|16245833|16245833|16245833 16247074|16247074|16247074|16247074 CCCACC 6mer3-8 dme-miR-278-3p 2L - 16247021 16247177 stop_codon PRL-1 FlyBase G8352.1 CGGAGCCATTAATGCCAAGCAGCTGTCCTTTTTGGAAAAATACAAGCCAAAGGCGAGACTAAAGCACAAAAATGGTCATAAGAATTCATGTTCTGTGCAATAGATTTCCAACACCATATGTATATTCCCACCAGACAAAAAGTGTTCATTTTTTCAA 131 16247053 0.952278126 24 105 1068 0.811428571 1.374137094 0.137142857 0.27480916 0.457142857 131 28 5 142 2L:16247021-16247177 6 114.5 45 FBgn0024734 9266.433333 401.94 617.5566667 0.012356426 0.284868388 0.185408087 2 2 2 0.5 dme-miR-305-5p 7mer-A1 GTACAAA 2L 16290916 16290922 + 2L_16290916_16290922_+ 0.771007124 0.774578114 0.772792619 0.002525078 pkaap FBtr0080826 16290778 16291195 2L + 16290875 16290957 3'utr pkaap FlyBase G4749.1 AGAAGTCGCAACAGAAGCTCTCTCTAGTACCCTCTCCTTATGTACAAATTGTGTTGAACAAATCAAATACTTTACTTTAACTT 30 16290914 0.98682668 10 29 249 0.972972973 1.255272505 0.081081081 0.166666667 0.324324324 30 0 1 36 2L:16290875-16290957 7 pkaap FBtr0080826 16290778 16291195 GTACAAA 7mer-A1 dme-miR-305-5p 2L + 16290878 16290942 3'utr pkaap FlyBase G3682.1 AGTCGCAACAGAAGCTCTCTCTAGTACCCTCTCCTTATGTACAAATTGTGTTGAACAAATCAAAT 31 16290914 0.98586447 9 30 254 0.976190476 1.311753861 0.357142857 0.258064516 0.452380952 31 0 1 41 2L:16290878-16290942 7 26.5 46 FBgn0040079 291.3133333 14.45 22.03666667 0.090967343 1.833910035 1.202541219 2 2 2 0.5 dme-miR-305-3p 7mer-m8 ATGTGCC 2L 16312998 16313004 + 2L_16312998_16313004_+ 0.468927031 0.661380327 0.565153679 0.136085033 fzy FBtr0080833 16312826 16313097 2L + 16312976 16313019 3'utr fzy FlyBase G4772.1 AATTACGGATAAATCTCTGATTATGTGCCCCCGCCGACGATATA 7 16312992 0.979340395 4 6 46 0.888888889 0.903089987 0.222222222 0.142857143 0.333333333 7 1 0 8 2L:16312976-16313019 7 fzy FBtr0080833 16312826 16313097 ATGTGCC 7mer-m8 dme-miR-305-3p 2L + 16312969 16313021 3'utr fzy FlyBase G3699.1 ACTTTGTAATTACGGATAAATCTCTGATTATGTGCCCCCGCCGACGATATATG 8 16312994 0.972907743 6 7 45 1 0.954242509 0.333333333 0.125 0.222222222 8 0 0 9 2L:16312969-16313021 7 5.5 47 FBgn0001086 1113.016667 67.49 102.82 0.004941525 0.081493555 0.053491539 6 4 5 0.5 dme-miR-184-3p 6mer2-7 CCGTCC 2L 16354263 16354268 + 2L_16354263_16354268_+ 0.514772221 0.524947876 0.519860048 0.007195306 CG4455 FBtr0080836 16353552 16354539 2L + 16354168 16354436 3'utr CG4455 FlyBase G4781.1 ACGCAACCCAATTTGCATTAAGAATCCGAATCGTACTAACAGACGAACTCTTCGTGATGCCTCGAATTTTGCACTACATTTTAAAACGCCGATTCCCGTCCCTTTATATACACAGGTTGTACTTAAATCGAAACCAAGTACTTAATAATTGTACCATGCCAATCATAGTTTAAGCGCCAATCTGCCGCCACGAATACATTTAAGAAATCTTCAGTTTGTGCATTTAGACCAGCATGAGTATCCTTCTATATATTGTGTCAAAAAAAACG 505 16354260 0.976422367 41 484 3115 0.953895072 1.93305321 0.06200318 0.194059406 0.352941176 505 23 6 600 2L:16354168-16354436 6 CG4455 FBtr0080836 16353552 16354539 CCGTCC 6mer2-7 dme-miR-184-3p 2L + 16354204 16354396 3'utr CG4455 FlyBase G3707.1 TAACAGACGAACTCTTCGTGATGCCTCGAATTTTGCACTACATTTTAAAACGCCGATTCCCGTCCCTTTATATACACAGGTTGTACTTAAATCGAAACCAAGTACTTAATAATTGTACCATGCCAATCATAGTTTAAGCGCCAATCTGCCGCCACGAATACATTTAAGAAATCTTCAGTTTGTGCATTTAGAC 352 16354260 0.914340584 26 330 2000 0.940839695 1.613665673 0.041984733 0.372159091 0.578244275 352 20 11 493 2L:16354204-16354396 6 303.5 48 FBgn0028506 237.38 18.83333333 28.63666667 1.278540736 16.11504425 10.59830055 3 3 3 0.5 dme-miR-304-5p 8mer-A1 TGAGATTA 2L 16400411 16400418 - 2L_16400411_16400418_- 0.433419718 0.479311317 0.456365517 0.032450262 CG5888 FBtr0340234|FBtr0080880 16400173|16400173 16400500|16400500 2L - 16400395 16400440 3'utr CG5888 FlyBase G10974.1 TAGCTTATTTCTGAGACTATAATGAGATTAAAATAGGCTGAAGCTA 102 16400407 0.811007327 10 90 550 0.889830508 1.176091259 0.355932203 0.12745098 0.245762712 102 7 6 105 2L:16400395-16400440 8 CG5888 FBtr0340234|FBtr0080880 16400173|16400173 16400500|16400500 TGAGATTA 8mer-A1 dme-miR-304-5p 2L - 16400395 16400440 3'utr CG5888 FlyBase G8437.1 TAGCTTATTTCTGAGACTATAATGAGATTAAAATAGGCTGAAGCTA 71 16400407 0.764266672 8 66 350 0.921568627 1.194976603 0.450980392 0.352112676 0.549019608 71 3 5 94 2L:16400395-16400440 8 82.5 49 FBgn0028523 337.3833333 21.57333333 32.72 0.244528973 3.824165637 2.521393643 -11 -11 -11 0.5 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 16508867 16508872 - 2L_16508867_16508872_- 0.787424089 0.957081815 0.872252952 0.11996611 CG5953 FBtr0337091 16508076 16510135 2L - 16508848 16508895 3'utr CG5953 FlyBase G10985.1 AAAAATATATAATATATATCATTGTACCTTATTTTGAAACAGAGATGT 37 16508873 0.93267216 6 35 410 0.957446809 1.352182518 0 0.216216216 0.382978723 37 1 1 45 2L:16508848-16508895 6 CG5953 FBtr0337091 16508076 16510135 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L - 16508845 16508893 3'utr CG5953 FlyBase G8448.1 AAATATATAATATATATCATTGTACCTTATTTTGAAACAGAGATGTTTT 18 16508873 0.696121129 3 18 203 1 1.380211242 0 0.277777778 0.458333333 18 0 0 24 2L:16508845-16508893 6 27 50 FBgn0032587 1367.886667 37.83 57.85 0.019738477 0.71371927 0.466724287 1 1 1 0.5 dme-miR-1003-3p 6mer3-8 ATGTGA 2L 16663038 16663043 + 2L_16663038_16663043_+ 0.514746108 0.878794024 0.696770066 0.257420739 CG42389 FBtr0335497 16661777 16663218 2L + 16663009 16663078 3'utr CG42389 FlyBase G4882.1 AATGTAATTGTTTCTTTCCATAGCATTTAATGTGAATTATACAAAACGGATTCTTATCTAAAAAACCAAG 32 16663021 0.860041263 9 30 305 0.947368421 1.255272505 0.289473684 0.125 0.263157895 32 1 1 36 2L:16663009-16663078 6 CG42389 FBtr0335497 16661777 16663218 ATGTGA 6mer3-8 dme-miR-1003-3p 2L + 16663014 16663075 3'utr CG42389 FlyBase G3801.1 AATTGTTTCTTTCCATAGCATTTAATGTGAATTATACAAAACGGATTCTTATCTAAAAAACC 15 16663020 0.874298366 8 15 127 1 1.342422681 0.045454545 0.4 0.590909091 15 0 0 22 2L:16663014-16663075 6 13.5 51 FBgn0259735 3930.076667 62.35333333 96.36 0.003435047 0.216508072 0.140099626 17 18 17.5 0.5 dme-miR-317-3p 7mer-m8 TGTGTTC 2L 16723429 16723435 - 2L_16723429_16723435_- 0.64695717 0.638311094 0.642634132 0.006113716 VhaSFD FBtr0080942|FBtr0335143|FBtr0080941|FBtr0080940 16723230|16722881|16723230|16723230 16723992|16723818|16723818|16723818 2L - 16723356 16723576 3'utr VhaSFD FlyBase G11016.1 AAGTATTGAGAGAAAAATTCGATTTTTTGTTGGCATTCCAAAAAGCAATTCACTGTAATGGCAGAACAAATACAAGCAACTATCCTCTACAAATTGTTCCATTCAATTCGATTGTTTATATATTTTGTTGTTATTATTATTTGTGTTCTTAATTTTATGAGTGCGCCGCTGTACAGAGTTTTTCTAAACCAGATGATATGCGCTTCTTACGTTTATATAGT 35 16723436 0.991898932 15 34 375 0.953488372 1.612783857 0.209302326 0.171428571 0.325581395 35 2 0 41 2L:16723356-16723576 7 VhaSFD FBtr0080941|FBtr0080940|FBtr0080942|FBtr0335143 16723230|16723230|16723230|16722881 16723818|16723818|16723992|16723818 TGTGTTC 7mer-m8 dme-miR-317-3p 2L - 16723415 16723455 3'utr VhaSFD FlyBase G8476.1 ATTTTGTTGTTATTATTATTTGTGTTCTTAATTTTATGAGT 15 16723436 0.803846157 2 11 209 0.740740741 1.301029996 0.222222222 0.428571429 0.703703704 14 7 0 20 2L:16723415-16723455 7 15 52 FBgn0027779 484.9333333 25.11333333 38.29666667 0.030932087 0.597292275 0.391678997 1 1 1 0.5 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2L 16835168 16835174 - 2L_16835168_16835174_- 0.82307513 0.786009529 0.80454233 0.026209337 CG13283 FBtr0080928 16835134 16835259 2L - 16835142 16835202 3'utr CG13283 FlyBase G11085.1 AAAAAATAAAATGTATTGTTATATTTACCTAGTCATTGGAAATATACTTGTTATCAACATT 15 16835181 0.989186626 8 15 142 1 1.230448921 0.058823529 0.133333333 0.235294118 15 0 0 17 2L:16835142-16835202 7 CG13283 FBtr0080928 16835134 16835259 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 16835160 16835190 3'utr CG13283 FlyBase G8531.1 GTATTGTTATATTTACCTAGTCATTGGAAAT 9 16835179 0.623950934 5 9 86 1 1.041392685 0.545454545 0.111111111 0.272727273 9 0 0 11 2L:16835160-16835190 7 10.5 53 FBgn0032613 497 28.40666667 43.38333333 0.021126761 0.369631542 0.242028429 7 5 6 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 1699298 1699305 + 2L_1699298_1699305_+ 0.618930818 0.628486791 0.623708805 0.006757112 chinmo FBtr0307047|FBtr0307047|FBtr0307047 1696148|1696148|1696148 1704682|1704682|1704682 2L + 1699255 1699336 3'utr chinmo FlyBase G1054.1 ATGCAGATGCAGACTACCAGTGTCACCCGATCCCCAGTTTGTTCTGTGATATCGTTTTCAAGTTGCAAGAACGAGTGGCGTT 87 1699296 0.989004859 13 76 838 0.834951456 1.457377197 0.223300971 0.149425287 0.281553398 87 15 2 86 2L:1699255-1699336 8 chinmo FBtr0307047|FBtr0307047|FBtr0307047 1696148|1696148|1696148 1704682|1704682|1704682 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 1699242 1699322 3'utr chinmo FlyBase G832.1 CTAACCATAGAAGATGCAGATGCAGACTACCAGTGTCACCCGATCCCCAGTTTGTTCTGTGATATCGTTTTCAAGTTGCAA 42 1699296 0.991286337 12 35 397 0.85 1.707570176 0.183333333 0.333333333 0.533333333 42 9 0 51 2L:1699242-1699322 8 58.5 54 FBgn0086758 5795.003333 67.42333333 103.87 0.010094904 0.867652148 0.563204005 2 2 2 0.5 dme-miR-7-5p 7mer-A1 TCTTCCA 2L 1707615 1707621 - 2L_1707615_1707621_- 0.689911118 0.668308596 0.679109857 0.015275274 CG17660 FBtr0077912 1707130 1707771 2L - 1707542 1707679 3'utr CG17660 FlyBase G6828.2 TAGTTCTATCCGCCATTGAGGAGGAAAACCCCTTATTGCTGCGCTGCGCTGACACTGATCTTCCAATTTCGAGAACCGTCTGTCCGGCCACGCCTTCTGAGCCCGTGTAAAATAATGTATGTAATCGTAGTTCCTTCT 180 1707631 0.801228029 29 162 1080 0.887892377 1.092545208 0.197309417 0.194444444 0.349775785 180 10 15 198 2L:1707542-1707679 7 CG17660 FBtr0077912 1707130 1707771 TCTTCCA 7mer-A1 dme-miR-7-5p 2L - 1707549 1707679 3'utr CG17660 FlyBase G5340.1 TAGTTCTATCCGCCATTGAGGAGGAAAACCCCTTATTGCTGCGCTGCGCTGACACTGATCTTCCAATTTCGAGAACCGTCTGTCCGGCCACGCCTTCTGAGCCCGTGTAAAATAATGTATGTAATCGTAGT 171 1707630 0.780137689 25 148 1006 0.88973384 1.290034611 0.16730038 0.409356725 0.615969582 171 18 11 234 2L:1707549-1707679 7 57 55 FBgn0031356 556.82 28.87 44.32666667 0.102367013 1.974367856 1.285907655 10 9 9.5 0.5 dme-miR-184-3p 6mer2-7 CCGTCC 2L 1711399 1711404 - 2L_1711399_1711404_- 0.848351289 0.822150811 0.83525105 0.018526551 frtz FBtr0333545|FBtr0077911 1711300|1711300 1711751|1711751 2L - 1711337 1711412 3'utr frtz FlyBase G6837.1 AACTATTGCCGTCCCAGTTAGTGCAAAGCTTTAAATAGGAAAGTTTTACTCATAGGTTCTCTATACTCTTTACACA 57 1711406 0.982518515 9 46 376 0.830985915 1.770852012 0.028169014 0.210526316 0.366197183 57 12 0 59 2L:1711337-1711412 6 frtz FBtr0333545|FBtr0077911 1711300|1711300 1711751|1711751 CCGTCC 6mer2-7 dme-miR-184-3p 2L - 1711378 1711412 3'utr frtz FlyBase G5348.2 AACTATTGCCGTCCCAGTTAGTGCAAAGCTTTAAA 38 1711406 0.683313038 6 31 206 0.833333333 0.954242509 0 0.342105263 0.537037037 38 5 4 45 2L:1711378-1711412 6 38.5 56 FBgn0086698 6514.663333 221.8366667 342.0966667 0.005909745 0.173551111 0.112541289 2 2 2 0.5 dme-miR-92b-3p 8mer-m1 GTGCAATT 2L 1711735 1711742 - 2L_1711735_1711742_- 0.595932088 0.596441355 0.596186722 0.000360129 frtz FBtr0333545|FBtr0077911|FBtr0333544 1711300|1711300|1711598 1711751|1711751|1711751 2L - 1711717 1711763 stop_codon frtz FlyBase G6839.1 GGCGTGGTCTAATAATTCATAGTGCAATTCCCAGGCGTACACCACAC 25 1711744 0.684334359 4 21 148 0.892857143 1.397940009 0.285714286 0.12 0.214285714 25 3 0 25 2L:1711717-1711763 8 frtz FBtr0333545|FBtr0077911|FBtr0333544 1711300|1711300|1711598 1711751|1711751|1711751 GTGCAATT 8mer-m1 dme-miR-92b-3p 2L - 1711720 1711778 stop_codon frtz FlyBase G5350.1 AAGGTGGTCCACTTCGGCGTGGTCTAATAATTCATAGTGCAATTCCCAGGCGTACACCA 7 1711744 0.802747528 5 7 38 1 1.079181246 0 0.571428571 0.75 7 0 0 12 2L:1711720-1711778 8 14 57 FBgn0086698 6514.663333 221.8366667 342.0966667 0.002148998 0.063109495 0.040924105 2 2 2 0.5 dme-miR-252-5p 8mer-A1 GTACTTAA 2L 17369156 17369163 - 2L_17369156_17369163_- 0.436044349 0.474014267 0.455029308 0.026848844 Lrch FBtr0339797 17368740 17370818 2L - 17369149 17369183 3'utr Lrch FlyBase G11114.1 ATTAATTTAGGCATACTATTGTACTTAAACGATGA 14 17369164 0.732390734 2 14 116 1 1.146128036 0 0 0 14 0 0 14 2L:17369149-17369183 8 Lrch FBtr0339797 17368740 17370818 GTACTTAA 8mer-A1 dme-miR-252-5p 2L - 17369146 17369181 3'utr Lrch FlyBase G8550.1 TAATTTAGGCATACTATTGTACTTAAACGATGAAAA 11 17369164 0.674633709 4 10 92 0.944444444 1.230448921 0.333333333 0.454545455 0.666666667 11 1 0 17 2L:17369146-17369181 8 12.5 58 FBgn0032633 3134.436667 93.34666667 144.12 0.003987957 0.133909442 0.086733278 1 1 1 0.5 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2L 17415522 17415528 - 2L_17415522_17415528_- 0.60013897 0.601703546 0.600921258 0.001106269 Dif FBtr0301577 17414905 17415684 2L - 17415441 17415566 5'utr Dif FlyBase G11145.1 ACAGCAAAACACACAACTGCACCAACAAATTAAACTTTTCTAGTCGTCTTTTTGTTTCAGTATTAATTATAATGATTACACAAATTTCTAGCTAAGAACCCCTGAGATCGATCGCTCACCAAATTC 218 17415529 0.992561497 18 210 2415 0.955172414 2.141449773 0.044827586 0.252293578 0.437931034 218 12 1 277 2L:17415441-17415566 7 Dif FBtr0301577 17414905 17415684 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2L - 17415486 17415544 5'utr Dif FlyBase G8580.1 CAACAAATTAAACTTTTCTAGTCGTCTTTTTGTTTCAGTATTAATTATAATGATTACAC 167 17415529 0.730211041 15 160 1896 0.954166667 2.359835482 0.016666667 0.317365269 0.525 167 11 0 229 2L:17415486-17415544 7 178.5 59 FBgn0011274 1172.133333 42.98333333 65.76666667 0.152286429 4.152772392 2.714140902 1 1 1 0.5 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 2L 17436913 17436918 - 2L_17436913_17436918_- 0.794485903 0.648281018 0.721383461 0.103382476 dl FBtr0081005|FBtr0301384|FBtr0301383|FBtr0081006 17436828|17436828|17436828|17436828 17437047|17437047|17437047|17437047 2L - 17436875 17436971 3'utr dl FlyBase G11160.1 TTAAATCTAACCGACCTGGTCGTCGTCTAAATGATTGTTTAGTGCTGTAATAACTAGTCTTAAGGCGAAATGTAATGTGTTTTTGTAGGAAGTAAGG 29 17436912 0.841383862 14 26 255 0.90625 1.161368002 0.34375 0.103448276 0.1875 29 2 1 29 2L:17436875-17436971 6 dl FBtr0301384|FBtr0081005|FBtr0301383|FBtr0081006 17436828|17436828|17436828|17436828 17437047|17437047|17437047|17437047 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 2L - 17436873 17436964 3'utr dl FlyBase G8589.1 TAACCGACCTGGTCGTCGTCTAAATGATTGTTTAGTGCTGTAATAACTAGTCTTAAGGCGAAATGTAATGTGTTTTTGTAGGAAGTAAGGTT 26 17436930 0.992579452 12 21 246 0.871794872 1.531478917 0.230769231 0.346153846 0.564102564 26 5 0 34 2L:17436873-17436964 6 15 60 FBgn0260632 1797.99 61.25333333 93.53666667 0.008342649 0.244884632 0.160364919 -6 12 3 0.5 dme-miR-304-5p 7mer-m8 TGAGATT 2L 18129026 18129032 + 2L_18129026_18129032_+ 0.432503266 0.563542662 0.498022964 0.092658848 CG5758 FBtr0081037|FBtr0340577|FBtr0340575|FBtr0081036|FBtr0081035|FBtr0340576 18128943|18128943|18128943|18128943|18128943|18128943 18129862|18129862|18129862|18129862|18129862|18129862 2L + 18128986 18129128 3'utr CG5758 FlyBase G5059.1 TATCGCGATGGTAAATGCGAAAATAACACAGGCGGCACTTTGAGATTGTTTTTGGGATCCCTCAATCGGCCTTCGAGTCTTGTATCAGTCTATTTCCGAAGTAGGAGACATTCCAGGCCCTTCGACAATTAGTCTATTGTCGC 39 18129025 0.978304154 14 39 258 1 1.681241237 0.0625 0.179487179 0.333333333 39 0 0 48 2L:18128986-18129128 7 CG5758 FBtr0081035|FBtr0340576|FBtr0340575|FBtr0081036|FBtr0081037|FBtr0340577 18128943|18128943|18128943|18128943|18128943|18128943 18129862|18129862|18129862|18129862|18129862|18129862 TGAGATT 7mer-m8 dme-miR-304-5p 2L + 18129013 18129071 3'utr CG5758 FlyBase G3934.1 ACAGGCGGCACTTTGAGATTGTTTTTGGGATCCCTCAATCGGCCTTCGAGTCTTGTATC 9 18129025 0.954842385 7 9 67 1 1.146128036 0 0.444444444 0.642857143 9 0 0 14 2L:18129013-18129071 7 11 61 FBgn0032666 5 0.196666667 0.306666667 2.2 55.93220339 35.86956522 1 1 1 0.5 dme-bantam-3p 7mer-A1 GATCTCA 2L 18130470 18130476 - 2L_18130470_18130476_- 0.683468324 0.692507306 0.687987815 0.006391538 kel FBtr0081043|FBtr0081042 18129882|18129882 18130773|18133613 2L - 18130442 18130507 3'utr kel FlyBase G11247.1 TTTCTAATTACAACGCTGCTCTACAAAATTGGATCTCAAAACAATACAAGCATAACGAATCGACCA 383 18130478 0.984834489 5 375 3033 0.976905312 2.325310372 0.018475751 0.104438642 0.207852194 383 9 1 423 2L:18130442-18130507 7 kel FBtr0081043|FBtr0081042 18129882|18129882 18130773|18133613 GATCTCA 7mer-A1 dme-bantam-3p 2L - 18130442 18130506 3'utr kel FlyBase G8652.1 TTCTAATTACAACGCTGCTCTACAAAATTGGATCTCAAAACAATACAAGCATAACGAATCGACCA 192 18130478 0.951201856 8 184 1509 0.957692308 2.396199347 0.034615385 0.270833333 0.461538462 192 11 0 249 2L:18130442-18130506 7 280 62 FBgn0001301 597.3333333 13.11666667 20.1 0.46875 21.34688691 13.93034826 2 2 2 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 18661256 18661263 + 2L_18661256_18661263_+ 0.390560921 0.42731958 0.40894025 0.025992326 MESR3 FBtr0343808|FBtr0343808|FBtr0343808|FBtr0329971|FBtr0329971|FBtr0329971|FBtr0329972|FBtr0329972|FBtr0329972|FBtr0081073|FBtr0081073|FBtr0081073 18661050|18661050|18661050|18661104|18661104|18661104|18661050|18661050|18661050|18661050|18661050|18661050 18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776 2L + 18661020 18661494 stop_codon MESR3 FlyBase G5088.1 TCGGACCCCCCAATCCCCAGCAGCATCGTTGAGTAGGGTCGGGCGCGTGGATCTGGAACACGAGCGCCCTATGGTGGCAGAACTGAATCTGCCTCGAAGCCACAACCCAACACAACCACGAAGAAATCCAGGAAAAACCAACCCTTAGTTCGTATGGCTAGTTATAGATCCATTTGTTATAGGCCTAAGTTATGCCAATGTGCGATCCGAGTGCGGAACTCGGCCAACACATTTATCTGTGATACGATTTAGGCGTCTTTACTTTAGAGAGGGATACTGATAACACAATTTGATAAAGAACATTTTTAAACGAAGAACATAGCAAATGAAGCGAGAGTTTTTGCAAGTTATTAAAACATATTAAGCGATTAACGTTTGTCGATAAGCAAGTTTTTTGTAAAACCTTTTCTAATATCACACATATACCCTTATGCATAATTATATTCGTACCATATAGTCCTGATATCTATCGAGT 1283 18661255 0.98555517 81 1160 9566 0.906088083 1.730844367 0.305051813 0.163678878 0.305051813 1283 120 25 1399 2L:18661020-18661494 8 MESR3 FBtr0081073|FBtr0081073|FBtr0081073|FBtr0329972|FBtr0329972|FBtr0329972|FBtr0329971|FBtr0329971|FBtr0329971|FBtr0343808|FBtr0343808|FBtr0343808 18661050|18661050|18661050|18661050|18661050|18661050|18661104|18661104|18661104|18661050|18661050|18661050 18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776|18661776 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 18661173 18661408 3'utr MESR3 FlyBase G3962.2 ATGGCTAGTTATAGATCCATTTGTTATAGGCCTAAGTTATGCCAATGTGCGATCCGAGTGCGGAACTCGGCCAACACATTTATCTGTGATACGATTTAGGCGTCTTTACTTTAGAGAGGGATACTGATAACACAATTTGATAAAGAACATTTTTAAACGAAGAACATAGCAAATGAAGCGAGAGTTTTTGCAAGTTATTAAAACATATTAAGCGATTAACGTTTGTCGATAAGCAA 766 18661255 0.96837547 45 670 5377 0.886054422 1.762595214 0.308673469 0.392950392 0.604591837 766 117 17 1042 2L:18661173-18661408 8 589.5 63 FBgn0032694 1795.86 104.38 160.0933333 0.328254986 5.647633646 3.682227034 1 1 1 0.5 dme-miR-92b-3p 6mer3-8 GTGCAA 2L 18661728 18661733 + 2L_18661728_18661733_+ 0.641441688 0.965722956 0.803582322 0.229301506 MESR3 FBtr0343808|FBtr0329971|FBtr0329972|FBtr0081073 18661050|18661104|18661050|18661050 18661776|18661776|18661776|18661776 2L + 18661629 18661772 3'utr MESR3 FlyBase G5090.1 ACATAAATATATATGCTATATTACACCTATCTATATATTATATATAGCTCTAAGCATTACATCATAGCCACTTGTCTGTATGAACTTCATATTTTGCCTGTGCAAAACAATCGCGAGAATCAAATAAAGCTGACAAAGAGAGCC 39 18661701 0.983022018 21 33 287 0.860465116 1.091080469 0.069767442 0.102564103 0.186046512 39 4 2 37 2L:18661629-18661772 6 MESR3 FBtr0081073|FBtr0329972|FBtr0329971|FBtr0343808 18661050|18661050|18661104|18661050 18661776|18661776|18661776|18661776 GTGCAA 6mer3-8 dme-miR-92b-3p 2L + 18661687 18661774 3'utr MESR3 FlyBase G3965.1 ACATCATAGCCACTTGTCTGTATGAACTTCATATTTTGCCTGTGCAAAACAATCGCGAGAATCAAATAAAGCTGACAAAGAGAGCCAA 15 18661704 0.982719571 8 13 102 0.846153846 1.342422681 0.076923077 0.466666667 0.692307692 15 4 0 22 2L:18661687-18661774 6 8 64 FBgn0032694 1795.86 104.38 160.0933333 0.00445469 0.076643035 0.04997085 27 24 25.5 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 18701315 18701321 - 2L_18701315_18701321_- 0.749182231 0.694248884 0.721715557 0.038843709 CG10376 FBtr0081128|FBtr0081128|FBtr0081128 18700604|18700604|18700604 18701626|18701626|18701626 2L - 18701307 18701334 3'utr CG10376 FlyBase G11433.1 CGCAATCGTTTAATGTGATACAACGAAA 6 18701322 0.680065494 5 6 35 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2L:18701307-18701334 7 CG10376 FBtr0081128|FBtr0081128|FBtr0081128 18700604|18700604|18700604 18701626|18701626|18701626 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 18701309 18701368 3'utr CG10376 FlyBase G8783.1 ATATAATCCATTTTCTAAAAGATTATTGAACGTACGCAATCGTTTAATGTGATACAACGA 5 18701322 0.977643299 4 5 39 1 0.698970004 0 0 0 5 0 0 5 2L:18701309-18701368 7 4.5 65 FBgn0032702 2337.326667 113.6933333 174.6866667 0.001925276 0.039580157 0.025760409 1 1 1 0.5 dme-miR-305-5p 7mer-A1 GTACAAA 2L 18701559 18701565 - 2L_18701559_18701565_- 0.7323104 0.479363192 0.605836796 0.17886068 CG10376 FBtr0081128 18700604 18701626 2L - 18701546 18701587 3'utr CG10376 FlyBase G11434.1 CGCCTTGGGATGGGTTAATTTTGTACAAATTCAAAGCAACTT 10 18701568 0.925135535 5 8 87 0.923076923 0.77815125 0.076923077 0.2 0.384615385 10 0 1 12 2L:18701546-18701587 7 CG10376 FBtr0081128 18700604 18701626 GTACAAA 7mer-A1 dme-miR-305-5p 2L - 18701555 18701591 3'utr CG10376 FlyBase G8784.1 TACCCGCCTTGGGATGGGTTAATTTTGTACAAATTCA 6 18701567 0.917906071 3 5 48 1 0.84509804 0.428571429 0.166666667 0.285714286 6 0 0 7 2L:18701555-18701591 7 6.5 66 FBgn0032702 2337.326667 113.6933333 174.6866667 0.002780955 0.057171338 0.03720948 3 2 2.5 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 18704413 18704419 + 2L_18704413_18704419_+ 0.535434327 0.53419265 0.534813489 0.000877944 CG10343 FBtr0081098|FBtr0081098|FBtr0081098 18704335|18704335|18704335 18704454|18704454|18704454 2L + 18704368 18704427 3'utr CG10343 FlyBase G5115.1 CATCGAGGAAACCTTAAATTGAAATCAAAAGCCAATACTATTTTATGTGATAGAATAAAC 13 18704409 0.975584137 4 11 100 0.857142857 1.079181246 0.142857143 0.076923077 0.142857143 13 2 0 12 2L:18704368-18704427 7 CG10343 FBtr0081098|FBtr0081098|FBtr0081098 18704335|18704335|18704335 18704454|18704454|18704454 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 18704372 18704452 3'utr CG10343 FlyBase G3989.1 GAGGAAACCTTAAATTGAAATCAAAAGCCAATACTATTTTATGTGATAGAATAAACGCGAGTAACTGCATGGGCGGCTATC 7 18704409 0.98105319 4 7 43 1 1 0 0.428571429 0.6 7 0 0 10 2L:18704372-18704452 7 7 67 FBgn0032703 216.33 32.94333333 50.78 0.032357972 0.212486087 0.137849547 4 4 4 0.5 dme-miR-980-3p 6mer3-8 GGCAGC 2L 18711278 18711283 - 2L_18711278_18711283_- 0.600116947 0.910315586 0.755216267 0.219343604 Irk3 FBtr0081125|FBtr0343114 18711069|18711069 18711336|18711336 2L - 18711248 18711297 3'utr Irk3 FlyBase G11464.1 CGCATTACACTTTTGGCAGCACTATATTAATAACGAATTCAAAAACATTT 8 18711284 0.988187978 3 7 62 1 0.954242509 0 0.125 0.222222222 8 0 0 9 2L:18711248-18711297 6 Irk3 FBtr0081125|FBtr0343114 18711069|18711069 18711336|18711336 GGCAGC 6mer3-8 dme-miR-980-3p 2L - 18711262 18711297 3'utr Irk3 FlyBase G8807.1 CGCATTACACTTTTGGCAGCACTATATTAATAACGA 5 18711284 0.950480016 2 4 32 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2L:18711262-18711297 6 5 68 FBgn0032706 11.00333333 0.756666667 1.173333333 0.454407755 6.607929515 4.261363636 1 1 1 0.5 dme-miR-1008-3p 6mer3-8 AGCTGT 2L 18833929 18833934 - 2L_18833929_18833934_- 0.512220478 0.562705978 0.537463228 0.035698639 CG10600 FBtr0273228|FBtr0081120|FBtr0331194 18833708|18833708|18833708 18834497|18834497|18834497 2L - 18833915 18833962 3'utr CG10600 FlyBase G11474.1 AAGTTTTTTAATGCAGGCTGGTACACTGAGCTGTTATAGTGTGTATTT 5 18833936 0.9850188 3 4 39 0.8 0.602059991 0.2 0 0 5 1 0 4 2L:18833915-18833962 6 CG10600 FBtr0331194|FBtr0081120|FBtr0273228 18833708|18833708|18833708 18834497|18834497|18834497 AGCTGT 6mer3-8 dme-miR-1008-3p 2L - 18833916 18833962 3'utr CG10600 FlyBase G8816.1 AAGTTTTTTAATGCAGGCTGGTACACTGAGCTGTTATAGTGTGTATT 9 18833937 0.805101533 6 9 66 1 1.041392685 0.090909091 0.111111111 0.272727273 9 0 0 11 2L:18833916-18833962 6 5 69 FBgn0032717 1261.5 29.36666667 45.24666667 0.003963535 0.170261067 0.110505378 2 3 2.5 0.5 dme-miR-932-5p 7mer-A1 GAATTGA 2L 19069567 19069573 + 2L_19069567_19069573_+ 0.636487838 0.674462689 0.655475263 0.026852309 CG17343 FBtr0081151 19065246 19069673 2L + 19069535 19069593 3'utr CG17343 FlyBase G5242.1 TTGTGCTTTTTCGCGCACTGCAAGCGAAATTAGAATTGATCGTCGTAGTTCACTAATAT 37 19069570 0.7690261 7 33 303 0.886363636 1.290034611 0.068181818 0.162162162 0.295454545 37 4 1 39 2L:19069535-19069593 7 CG17343 FBtr0081151 19065246 19069673 GAATTGA 7mer-A1 dme-miR-932-5p 2L + 19069534 19069597 3'utr CG17343 FlyBase G4075.1 CTTGTGCTTTTTCGCGCACTGCAAGCGAAATTAGAATTGATCGTCGTAGTTCACTAATATATTT 30 19069570 0.730505974 7 29 235 0.96969697 1.505149978 0.060606061 0.1 0.181818182 30 1 0 32 2L:19069534-19069597 7 29.5 70 FBgn0032751 35 7.813333333 11.57333333 0.842857143 3.77559727 2.548963134 -3 -3 -3 0.5 dme-miR-304-5p 8mer-A1 TGAGATTA 2L 19173529 19173536 + 2L_19173529_19173536_+ 0.3905869 0.3433784 0.36698265 0.03338145 brat FBtr0081160 19171258 19179758 2L + 19173494 19173548 3'utr brat FlyBase G5288.1 GATAATTACCTATGTTTTGTGTGTATCTACTTAAGTGAGATTATTAAATATACGA 23 19173528 0.969755715 8 21 212 0.923076923 1.380211242 0.038461538 0.086956522 0.192307692 23 2 0 24 2L:19173494-19173548 8 brat FBtr0081160 19171258 19179758 TGAGATTA 8mer-A1 dme-miR-304-5p 2L + 19173507 19173549 3'utr brat FlyBase G4117.1 GTTTTGTGTGTATCTACTTAAGTGAGATTATTAAATATACGAA 22 19173528 0.748183524 6 18 181 0.848484848 1.447158031 0.03030303 0.363636364 0.575757576 22 5 0 28 2L:19173507-19173549 8 20.5 71 FBgn0010300 4742.333333 86.64666667 133.0666667 0.004322767 0.23659306 0.154058116 1 1 1 0.5 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 2L 19174189 19174194 + 2L_19174189_19174194_+ 0.532583009 0.838741155 0.685662082 0.216486539 brat FBtr0081160|FBtr0081160 19171258|19171258 19179758|19179758 2L + 19174136 19174208 3'utr brat FlyBase G5293.1 CAACCCAACAACAAATGCCACAAAAACCAACTGAAAAACCATTAAAGATTTTATACTTATTCTGATAAAAAGA 10 19174195 0.999834673 8 10 53 1 1.079181246 0.166666667 0.2 0.333333333 10 0 0 12 2L:19174136-19174208 6 brat FBtr0081160|FBtr0081160 19171258|19171258 19179758|19179758 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 2L + 19174140 19174199 3'utr brat FlyBase G4121.1 CCAACAACAAATGCCACAAAAACCAACTGAAAAACCATTAAAGATTTTATACTTATTCTG 8 19174177 0.962709418 6 8 40 1 1 0.2 0.25 0.4 8 0 0 10 2L:19174140-19174199 6 4.5 72 FBgn0010300 4742.333333 86.64666667 133.0666667 0.0009489 0.051935062 0.033817635 -6 12 3 0.5 dme-miR-8-3p 7mer-A1 AGTATTA 2L 19730291 19730297 + 2L_19730291_19730297_+ 0.770836657 0.743471741 0.757154199 0.019349977 Lar FBtr0331242|FBtr0112800|FBtr0331239|FBtr0331240|FBtr0081260|FBtr0331241|FBtr0305950 19730161|19730161|19730161|19730161|19730161|19730161|19730161 19732069|19732069|19731561|19731561|19731561|19731561|19731561 2L + 19730162 19730375 3'utr Lar FlyBase G5452.1 AGTGCATTTCTCAATGGGATTGCCAGGTCCACAGAGCTAAAATCTCATCGACCCTGCGTTCGTTGCATACTTATTTCGAACTCTACGCATAATACGCATTTACGATATACACGGATATCATAACTCTAAAGTATTATAGCCAGCTACTGCCCACACTTACTTAATACACCTATACTTATATACGTGGATATGTTTAGTTGATAAGCGCACCCCC 55 19730297 0.978948744 28 48 331 0.876923077 1.755874856 0.230769231 0.181818182 0.307692308 55 8 0 57 2L:19730162-19730375 7 Lar FBtr0305950|FBtr0081260|FBtr0331241|FBtr0331239|FBtr0331240|FBtr0331242|FBtr0112800 19730161|19730161|19730161|19730161|19730161|19730161|19730161 19731561|19731561|19731561|19731561|19731561|19732069|19732069 AGTATTA 7mer-A1 dme-miR-8-3p 2L + 19730161 19730331 stop_codon Lar FlyBase G4239.1 GAGTGCATTTCTCAATGGGATTGCCAGGTCCACAGAGCTAAAATCTCATCGACCCTGCGTTCGTTGCATACTTATTTCGAACTCTACGCATAATACGCATTTACGATATACACGGATATCATAACTCTAAAGTATTATAGCCAGCTACTGCCCACACTTACTTAATACACC 35 19730298 0.986041395 14 26 214 0.760869565 1.243038049 0.043478261 0.285714286 0.456521739 35 10 1 35 2L:19730161-19730331 7 24 73 FBgn0000464 569.28 8.026666667 12.27666667 0.042158516 2.990033223 1.954928048 -6 -7 -6.5 0.5 dme-miR-970-3p 6mer2-7 CTTATG 2L 19793783 19793788 - 2L_19793783_19793788_- 0.999254768 0.829320823 0.914287795 0.120161484 fs(2)ltoPP43 FBtr0332246|FBtr0081317 19793609|19793484 19794265|19794524 2L - 19793737 19793831 3'utr fs(2)ltoPP43 FlyBase G11855.1 AGTGTACTATTTGGAATCGTTTTAGGCAAATGTCTCTCATTACCTTATGTTCATAGAATTAATTAGCTATTAGATTAGAATAATTTACCCCCACA 23 19793801 0.990687535 11 20 204 0.884615385 1.06069784 0.192307692 0.130434783 0.230769231 23 2 1 23 2L:19793737-19793831 6 fs(2)ltoPP43 FBtr0081317|FBtr0332246 19793484|19793609 19794524|19794265 CTTATG 6mer2-7 dme-miR-970-3p 2L - 19793775 19793813 3'utr fs(2)ltoPP43 FlyBase G9106.1 GTTTTAGGCAAATGTCTCTCATTACCTTATGTTCATAGA 12 19793792 0.674375356 3 11 96 0.933333333 1.146128036 0.133333333 0.166666667 0.333333333 12 1 0 14 2L:19793775-19793813 6 12.5 74 FBgn0004811 606.5633333 48.93333333 75.4 0.020607906 0.255449591 0.165782493 13 4 8.5 0.5 dme-miR-317-3p 6mer3-8 TGTGTT 2L 20063986 20063991 + 2L_20063986_20063991_+ 0.845700115 0.504028128 0.674864121 0.241598588 lok FBtr0081330|FBtr0306234|FBtr0081328|FBtr0081329 20063974|20063184|20063974|20063974 20064378|20064378|20064381|20064381 2L + 20063966 20064021 stop_codon lok FlyBase G5497.1 GCGACGCTAGGTTTCGTTTCTGTGTTTCCATCGTTAATACGTGAGGGTCGAGGCGC 49 20063984 0.73622517 10 24 381 0.545454545 1.176091259 0.327272727 0.12244898 0.218181818 49 24 1 30 2L:20063966-20064021 6 lok FBtr0306234 20063184 20064378 TGTGTT 6mer3-8 dme-miR-317-3p 2L + 20063938 20064006 stop_codon lok FlyBase G4276.1 ACTTCCTTGAGCCACCCACCAAGCGATCGCGACGCTAGGTTTCGTTTCTGTGTTTCCATCGTTAATACG 24 20063983 0.997549566 5 9 143 0.342857143 1.079181246 0.285714286 0.416666667 0.6 24 23 0 12 2L:20063938-20064006 6 16.5 75 FBgn0019686 524.4266667 29.24666667 44.53333333 0.031462931 0.564166857 0.370508982 2 3 2.5 0.5 dme-miR-1006-3p 6mer3-8 CGAATT 2L 20093153 20093158 - 2L_20093153_20093158_- 0.740613181 0.665822811 0.703217996 0.052884799 Taf13 FBtr0081340 20093086 20093223 2L - 20093124 20093196 3'utr Taf13 FlyBase G11903.1 CCAGGTATAAGCCAAACCTAGCAGTTAGCTCCAAGATGCGAATTATTTTTAATGTCTTTAATACTCTAAGCTA 18 20093188 0.967328873 8 18 99 1 1.322219295 0.095238095 0.166666667 0.285714286 18 0 0 21 2L:20093124-20093196 6 Taf13 FBtr0081340 20093086 20093223 CGAATT 6mer3-8 dme-miR-1006-3p 2L - 20093139 20093195 3'utr Taf13 FlyBase G9139.1 CAGGTATAAGCCAAACCTAGCAGTTAGCTCCAAGATGCGAATTATTTTTAATGTCTT 7 20093169 0.987594947 5 6 45 0.777777778 0.84509804 0.222222222 0.285714286 0.444444444 7 2 0 7 2L:20093139-20093195 6 6.5 76 FBgn0032847 298 62.63 96.09 0.021812081 0.103784129 0.067644916 30 11 20.5 0.5 dme-bantam-3p 8mer-A1 TGATCTCA 2L 201860 201867 + 2L_201860_201867_+ 0.521657175 0.521377795 0.521517485 0.000197566 spen FBtr0332336|FBtr0330653|FBtr0078123|FBtr0078121 201413|201413|201413|201413 203250|203250|203250|203397 2L + 201800 201890 3'utr spen FlyBase G618.3 TTATATAACTCTCCGTAATTAAAAACCTTAAAGAAAAAGCTTGCAAAGTATCGTTAAGTTTGATCTCAAGAAAGAATGTTTTATTTTTGCT 1179 201859 0.786842431 15 1148 9915 0.973856209 2.086036093 0.328976035 0.146734521 0.269426289 1179 26 10 1341 2L:201800-201890 8 spen FBtr0078123|FBtr0078121|FBtr0332336|FBtr0330653 201413|201413|201413|201413 203250|203397|203250|203250 TGATCTCA 8mer-A1 dme-bantam-3p 2L + 201788 201902 3'utr spen FlyBase G495.1 TGTCTAAATTAATTATATAACTCTCCGTAATTAAAAACCTTAAAGAAAAAGCTTGCAAAGTATCGTTAAGTTTGATCTCAAGAAAGAATGTTTTATTTTTGCTTATTTAAAAAGA 710 201859 0.986641201 16 680 5881 0.957364341 1.994756945 0.304263566 0.322535211 0.533914729 710 35 9 988 2L:201788-201902 8 935 77 FBgn0016977 7307.703333 43.43 66.34333333 0.127947175 21.52889708 14.09335276 1 1 1 0.5 dme-miR-184-3p 6mer2-7 CCGTCC 2L 2043247 2043252 + 2L_2043247_2043252_+ 0.750828642 0.91710151 0.833965076 0.117572695 Su(dx) FBtr0339529|FBtr0077823|FBtr0077822|FBtr0077824|FBtr0334778 2043182|2043182|2043182|2043182|2043182 2043677|2044372|2044372|2044372|2043677 2L + 2043182 2043412 stop_codon Su(dx) FlyBase G1147.1 GAGTGGCAGTCGATTTGTGGTCGGTTTGTTGATTAATGTTTAATTCCAGTTAAGCGCCTGCTTTACCGTCCCCTCCCCCTTTCCATTTGACGACCACGTTGCGTTAAATAGTTACTGTTATTATTATTATTACATACGTATGTATTACTACTGTATACTGTAAACACGAAACACACACTTCTGTCTGTCTATTCCTATGTTCGCAACCGATATCACACGAGATATTTGTTA 522 2043245 0.978794256 37 507 3452 0.972580645 2.081347308 0.022580645 0.155172414 0.288709677 522 13 4 603 2L:2043182-2043412 6 Su(dx) FBtr0077824|FBtr0334778|FBtr0077823|FBtr0077822|FBtr0339529 2043182|2043182|2043182|2043182|2043182 2044372|2043677|2044372|2044372|2043677 CCGTCC 6mer2-7 dme-miR-184-3p 2L + 2043182 2043269 stop_codon Su(dx) FlyBase G903.2 GAGTGGCAGTCGATTTGTGGTCGGTTTGTTGATTAATGTTTAATTCCAGTTAAGCGCCTGCTTTACCGTCCCCTCCCCCTTTCCATTT 243 2043245 0.697044065 14 232 1494 0.943243243 1.940765436 0.008108108 0.386831276 0.597297297 243 18 3 349 2L:2043182-2043269 6 337.5 78 FBgn0003557 1814.713333 49.05333333 75.26666667 0.185979787 6.880266377 4.484056687 2 2 2 0.5 dme-miR-34-5p 7mer-A1 ACTGCCA 2L 20647246 20647252 + 2L_20647246_20647252_+ 0.468304794 0.724256824 0.596280809 0.180985395 CG2608 FBtr0081384 20646861 20647381 2L + 20647182 20647267 3'utr CG2608 FlyBase G5619.1 TGACAGCCTTGTATCGAGTGAGATTAGTTTTGTTGATTCAGATTAGTCACATGAAAGGTCTCTGACTGCCATGTAAATCATAAGTA 14 20647244 0.984343313 6 12 101 0.882352941 0.875061263 0.176470588 0.214285714 0.352941176 14 1 1 15 2L:20647182-20647267 7 CG2608 FBtr0081384 20646861 20647381 ACTGCCA 7mer-A1 dme-miR-34-5p 2L + 20647221 20647268 3'utr CG2608 FlyBase G4365.1 AGATTAGTCACATGAAAGGTCTCTGACTGCCATGTAAATCATAAGTAA 9 20647253 0.956937515 4 9 57 1 1.230448921 0.235294118 0.777777778 0.882352941 9 0 0 17 2L:20647221-20647268 7 9 79 FBgn0032870 618.86 51.52 79.05666667 0.014542869 0.174689441 0.113842392 2 -7 -2.5 0.5 dme-miR-308-3p 7mer-m1 TGTGATT 2L 20730913 20730919 - 2L_20730913_20730919_- 0.468515806 0.44319667 0.455856238 0.017903307 CG9318 FBtr0081393|FBtr0335149 20730643|20730414 20730999|20730999 2L - 20730809 20730974 3'utr CG9318 FlyBase G12008.1 TGCGAATGTATTTTTGTATGTGTAGCCACAAATTTACACTTAAGCCTAATGTGTGTGTGATTTCTGCGCTGTGCGCCCGGCACAGACAGTTTTCTGTTTACTATAATTACGATTGATATGTGTATAATAACATATGTTTGTATCAGGCAAGGAACAGTGGAGTAAC 93 20730913 0.985962272 25 92 775 0.990740741 2.029383778 0.231481481 0.139784946 0.259259259 93 1 0 107 2L:20730809-20730974 7 CG9318 FBtr0081393|FBtr0335149 20730643|20730414 20730999|20730999 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 20730886 20730957 3'utr CG9318 FlyBase G9212.1 ATGTGTAGCCACAAATTTACACTTAAGCCTAATGTGTGTGTGATTTCTGCGCTGTGCGCCCGGCACAGACAG 67 20730913 0.987733209 12 65 588 0.962264151 2.008600172 0.160377358 0.432835821 0.641509434 67 4 0 102 2L:20730886-20730957 7 65 80 FBgn0032880 1856.426667 79.74 121.9 0.035013503 0.815149235 0.533223954 -6 -6 -6 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 20740044 20740050 + 2L_20740044_20740050_+ 0.563383571 0.572771035 0.568077303 0.006637894 Fs(2)Ket FBtr0305586|FBtr0305586|FBtr0305586|FBtr0305585|FBtr0305585|FBtr0305585 20738901|20738901|20738901|20738901|20738901|20738901 20750941|20750941|20750941|20750941|20750941|20750941 2L + 20739947 20740111 5'utr-coding Fs(2)Ket FlyBase G5673.1 TATGTACGTGGTATTTTGATTGCGACAAACCCCCGAAATGTTTGGAAACGGATGAGGATTCCCCCTTTCTGTGGCGCGCGTGTGCATCGGCGTGTTGTGTGATATTATGGATTAAGCGTAAGAACTTTTCTAGTGAAACGAATGATTTTAGACCTAAGCAAAACC 244 20740042 0.777988656 33 226 1966 0.929078014 2.117271296 0.460992908 0.118852459 0.237588652 244 19 1 262 2L:20739947-20740111 7 Fs(2)Ket FBtr0305585|FBtr0305585|FBtr0305585|FBtr0305586|FBtr0305586|FBtr0305586 20738901|20738901|20738901|20738901|20738901|20738901 20750941|20750941|20750941|20750941|20750941|20750941 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 20739895 20740106 5'utr-coding Fs(2)Ket FlyBase G4403.2 TACCCCTATGCCAATAGTTATGCTGTGATGGATGCTTGAGAGGAACTATGTCTATGTACGTGGTATTTTGATTGCGACAAACCCCCGAAATGTTTGGAAACGGATGAGGATTCCCCCTTTCTGTGGCGCGCGTGTGCATCGGCGTGTTGTGTGATATTATGGATTAAGCGTAAGAACTTTTCTAGTGAAACGAATGATTTTAGACCTAAGCA 159 20740042 0.986032248 32 146 1331 0.927419355 1.759667845 0.584677419 0.408805031 0.620967742 159 15 3 230 2L:20739895-20740106 7 114.5 81 FBgn0262743 4510.123333 82.11666667 125.5566667 0.025387332 1.394357621 0.911938832 2 2 2 0.5 dme-miR-932-5p 6mer3-8 GGAATT 2L 20749193 20749198 + 2L_20749193_20749198_+ 0.436468578 0.498351759 0.467410168 0.04375803 Fs(2)Ket FBtr0305586 20738901 20750941 2L + 20749151 20749217 3'utr Fs(2)Ket FlyBase G5679.1 AAGGGAACATTTGTTTTATCAGATTCGAACATATCAGAAATTGGAATTTGAAATGGCAACTTGGAGC 6 20749196 0.974645763 5 6 42 1 0.903089987 0.625 0.166666667 0.375 6 0 0 8 2L:20749151-20749217 6 Fs(2)Ket FBtr0305586 20738901 20750941 GGAATT 6mer3-8 dme-miR-932-5p 2L + 20749160 20749224 3'utr Fs(2)Ket FlyBase G4410.1 TTTGTTTTATCAGATTCGAACATATCAGAAATTGGAATTTGAAATGGCAACTTGGAGCACTTGAT 5 20749192 0.988272988 4 4 41 0.8 0.903089987 0.5 0.8 0.9 5 2 0 8 2L:20749160-20749224 6 4 82 FBgn0262743 4510.123333 82.11666667 125.5566667 0.000886894 0.048711183 0.031858125 -3 1 -1 0.5 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 2L 20788624 20788629 + 2L_20788624_20788629_+ 0.513041307 0.697374314 0.60520781 0.130343114 Pomp FBtr0081414 20788537 20789098 2L + 20788551 20788666 3'utr Pomp FlyBase G5710.1 GAAGTTGCTAAATGCCTGGCATTCAGCCTTTAAACTCTAAGACACTCTTAAGATCAGCAAATAAAATATATTTTGGTGCGACCAGCTAGAGGTAAACAAAATTCACCATTTCTTTG 42 20788623 0.706173228 19 39 254 0.886792453 1.070037867 0.113207547 0.238095238 0.396226415 42 3 3 47 2L:20788551-20788666 6 Pomp FBtr0081414 20788537 20789098 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 2L + 20788550 20788644 3'utr Pomp FlyBase G4437.1 TGAAGTTGCTAAATGCCTGGCATTCAGCCTTTAAACTCTAAGACACTCTTAAGATCAGCAAATAAAATATATTTTGGTGCGACCAGCTAGAGGTA 21 20788624 0.776688047 8 20 118 0.967741935 1.176091259 0.258064516 0.428571429 0.612903226 21 0 1 30 2L:20788550-20788644 6 13.5 83 FBgn0032884 886.4133333 100.35 153.2666667 0.015229915 0.134529148 0.088081775 1 0 0.5 0.5 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 20872586 20872593 - 2L_20872586_20872593_- 0.605327306 0.611568802 0.608448054 0.004413407 sky FBtr0081443|FBtr0330257|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081447|FBtr0081444|FBtr0330256|FBtr0081441|FBtr0081442|FBtr0081446 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 2L - 20872530 20872667 3'utr sky FlyBase G12041.1 ATTTTCAATACCAACGAAATTCTTTGCTCACCTCCACCTAAAAACTGCACGTACACAAAATTTTTGCACACTTTTCTAGTCAATTTTTATGTTTTACAAAAATAACATGGTGTGTCTCCTCCCATTTCCCTCTGGACG 186 20872594 0.914851519 22 176 1855 0.948717949 1.86923172 0.11965812 0.188172043 0.354700855 186 10 2 222 2L:20872530-20872667 8 sky FBtr0081442|FBtr0081447|FBtr0081446|FBtr0330256|FBtr0081444|FBtr0081441|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081443|FBtr0330257 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 20872526 20872625 3'utr sky FlyBase G9235.1 AACTGCACGTACACAAAATTTTTGCACACTTTTCTAGTCAATTTTTATGTTTTACAAAAATAACATGGTGTGTCTCCTCCCATTTCCCTCTGGACGAACA 138 20872594 0.990473723 17 133 1362 0.974358974 2.278753601 0.082051282 0.297101449 0.502564103 138 5 0 190 2L:20872526-20872625 8 141.5 84 FBgn0032901 1773.08 43.72 66.94 0.079804634 3.236505032 2.113833284 1 1 1 0.5 dme-miR-995-5p 6mer3-8 AATTCG 2L 20873117 20873122 - 2L_20873117_20873122_- 0.568605843 0.792983528 0.680794685 0.158658993 sky FBtr0081443|FBtr0330257|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081445|FBtr0081447|FBtr0081444|FBtr0330256|FBtr0081441|FBtr0081442|FBtr0081446 20871333|20871333|20871333|20871333|20871333|20872993|20871333|20871333|20871333|20871333|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 2L - 20873090 20873159 3'utr sky FlyBase G12045.1 TTTTTCTTTCTGTAAACCAAATTTACTGACTTGACTGAATTCGTTATTAATGTTATTAATATTATTATTG 97 20873132 0.983889909 10 91 844 0.933333333 1.748188027 0.041666667 0.18556701 0.341666667 97 7 1 112 2L:20873090-20873159 6 sky FBtr0081442|FBtr0081447|FBtr0081446|FBtr0330256|FBtr0081444|FBtr0081441|FBtr0301961|FBtr0330255|FBtr0081440|FBtr0081445|FBtr0081443|FBtr0330257 20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20871333|20872993|20871333|20871333 20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748|20873748 AATTCG 6mer3-8 dme-miR-995-5p 2L - 20873104 20873177 3'utr sky FlyBase G9237.1 TTAATTTATGAAACTGTATTTTTCTTTCTGTAAACCAAATTTACTGACTTGACTGAATTCGTTATTAATGTTAT 64 20873132 0.66544607 13 62 539 0.975 1.414973348 0.0125 0.21875 0.375 64 0 2 78 2L:20873104-20873177 6 73.5 85 FBgn0032901 1773.08 43.72 66.94 0.04145329 1.68115279 1.097998207 10 10 10 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 210427 210432 + 2L_210427_210432_+ 0.959659618 0.982654152 0.971156885 0.016259638 Tbc1d15-17 FBtr0332339|FBtr0332339|FBtr0332339|FBtr0332338|FBtr0332338|FBtr0332338|FBtr0078125|FBtr0078125|FBtr0078125 209857|209857|209857|209857|209857|209857|209857|209857|209857 210725|210725|210725|210506|210506|210506|210506|210506|210506 2L + 210410 210448 3'utr Tbc1d15-17 FlyBase G643.1 TTAAGTTTAGTCAATTACTGTGAATATACATCCGTATAC 16 210434 0.732856639 4 12 143 0.705882353 1.079181246 0.058823529 0.0625 0.117647059 16 5 0 12 2L:210410-210448 6 Tbc1d15-17 FBtr0332338|FBtr0332338|FBtr0332338|FBtr0332339|FBtr0332339|FBtr0332339|FBtr0078125|FBtr0078125|FBtr0078125 209857|209857|209857|209857|209857|209857|209857|209857|209857 210506|210506|210506|210725|210725|210725|210506|210506|210506 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 210412 210448 3'utr Tbc1d15-17 FlyBase G517.1 AAGTTTAGTCAATTACTGTGAATATACATCCGTATAC 12 210425 0.676549666 5 11 100 0.9375 1.176091259 0 0.25 0.4375 12 1 0 15 2L:210412-210448 6 14 86 FBgn0031233 273.62 11.06666667 17.00333333 0.05116585 1.265060241 0.823367967 -7 2 -2.5 0.5 dme-miR-34-5p 7mer-A1 ACTGCCA 2L 210572 210578 + 2L_210572_210578_+ 0.665905321 0.737747497 0.701826409 0.050800107 Tbc1d15-17 FBtr0332339 209857 210725 2L + 210555 210593 3'utr Tbc1d15-17 FlyBase G645.1 AATCCATCAAGAACTTGACTGCCATTTGTATTCGGGTGG 5 210569 0.960334428 2 5 35 1 0.77815125 0.666666667 0.2 0.333333333 5 0 0 6 2L:210555-210593 7 Tbc1d15-17 FBtr0332339 209857 210725 ACTGCCA 7mer-A1 dme-miR-34-5p 2L + 210559 210593 3'utr Tbc1d15-17 FlyBase G518.1 CATCAAGAACTTGACTGCCATTTGTATTCGGGTGG 5 210580 0.930714971 2 3 32 0.571428571 0.602059991 0.571428571 0.4 0.571428571 5 3 0 4 2L:210559-210593 7 4.5 87 FBgn0031233 273.62 11.06666667 17.00333333 0.016446166 0.406626506 0.264653989 3 -8 -2.5 0.5 dme-miR-308-3p 7mer-m1 TGTGATT 2L 21103985 21103991 + 2L_21103985_21103991_+ 0.486641741 0.506692103 0.496666922 0.014177774 CG9257 FBtr0081465 21103925 21104321 2L + 21103851 21104023 stop_codon CG9257 FlyBase G5736.2 CTCATCGATCTTGCTACCAGTTTTCATCGCCATCGGGGCCTTTATACCACTGCTGTTCTGCCTCTGCAAGCTGTGATCCCCATCCGTTGCTCACTCAACGCTTTCGCCTGCGTTGGTTTCCTGCTTTGTGATTTTGTGATTTTGATAAAAGACTTAATTATATACTTATCGTT 218 21103991 0.988755642 36 196 2355 0.904411765 1.545837067 0.25 0.178899083 0.341911765 218 20 6 246 2L:21103851-21104023 7 CG9257 FBtr0081465 21103925 21104321 TGTGATT 7mer-m1 dme-miR-308-3p 2L + 21103884 21104029 stop_codon CG9257 FlyBase G4458.1 CGGGGCCTTTATACCACTGCTGTTCTGCCTCTGCAAGCTGTGATCCCCATCCGTTGCTCACTCAACGCTTTCGCCTGCGTTGGTTTCCTGCTTTGTGATTTTGTGATTTTGATAAAAGACTTAATTATATACTTATCGTTTAGTTC 167 21103983 0.879128559 31 159 1852 0.952380952 1.77815125 0.186507937 0.329341317 0.555555556 167 9 3 240 2L:21103884-21104029 7 143 88 FBgn0032916 272.05 21.3 32.82666667 0.525638669 6.713615023 4.35621446 -6 2 -2 0.5 dme-miR-34-5p 7mer-A1 ACTGCCA 2L 21136321 21136327 - 2L_21136321_21136327_- 0.660372761 0.669826451 0.665099606 0.006684775 Dap160 FBtr0333087|FBtr0333086 21135274|21135274 21137095|21137095 2L - 21136307 21136359 3'utr Dap160 FlyBase G12107.1 TGATTTATTGACTAAGTTAAGCGCTTATCTGAACTGCCATAACTGTATTAATT 49 21136330 0.795762379 7 47 358 0.962962963 1.238882089 0.111111111 0.040816327 0.12962963 49 0 2 52 2L:21136307-21136359 7 Dap160 FBtr0333086|FBtr0333087 21135274|21135274 21137095|21137095 ACTGCCA 7mer-A1 dme-miR-34-5p 2L - 21136306 21136352 3'utr Dap160 FlyBase G9277.1 TTGACTAAGTTAAGCGCTTATCTGAACTGCCATAACTGTATTAATTT 43 21136330 0.787847382 6 41 323 1 1.763427994 0.275862069 0.302325581 0.482758621 43 0 0 58 2L:21136306-21136352 7 44 89 FBgn0023388 1725.443333 51.01 78.44666667 0.025500693 0.862575965 0.560890626 3 3 3 0.5 dme-miR-14-3p 7mer-A1 AGACTGA 2L 21357475 21357481 + 2L_21357475_21357481_+ 0.753353237 0.764866203 0.75910972 0.00814092 Tsp39D FBtr0273404 21356804 21358271 2L + 21357452 21357489 3'utr Tsp39D FlyBase G5907.1 TTAAAACATTTCTTTAGAATTCGAGACTGAATGACATA 12 21357471 0.788036854 4 11 79 0.9375 1.176091259 0.3125 0.25 0.4375 12 1 0 15 2L:21357452-21357489 7 Tsp39D FBtr0273404 21356804 21358271 AGACTGA 7mer-A1 dme-miR-14-3p 2L + 21357462 21357487 3'utr Tsp39D FlyBase G4588.1 TCTTTAGAATTCGAGACTGAATGACA 5 21357465 0.634183922 3 4 30 1 1.079181246 0.333333333 0.6 0.833333333 5 0 0 12 2L:21357462-21357487 7 8.5 90 FBgn0032943 321.6666667 16.54333333 25.32333333 0.02642487 0.513802136 0.335658813 4 10 7 0.5 dme-miR-7-5p 7mer-A1 TCTTCCA 2L 2156563 2156569 - 2L_2156563_2156569_- 0.70986114 0.658113374 0.683987257 0.03659115 aop FBtr0077850|FBtr0330658|FBtr0077851 2156482|2156482|2156482 2158164|2158164|2158164 2L - 2156518 2156786 3'utr aop FlyBase G6954.1 TTGAAGCACTTTATTAATTACATTAAACGGAATGAACAGAGTTAGGAGAAGATATCATCGCTGCACGTTCATACAATTAGCCTGTAGTGCAACTGTAATTATTAATTATTGTGTAGATCTACGCTAAAGTTAATTTTCTATTTGTTTTTCGTACGCCTTAAGTTTAAACACCGCCAATAGCTAATAATTAGCACTCTAGTGTCGCCACAATACCTGTTCTTCCATTGAAAACGTTATCTTTCGATCAATACATAATTTATATATGTATA 166 2156570 0.986510365 32 163 1204 0.984615385 1.982271233 0.179487179 0.138554217 0.266666667 166 2 1 192 2L:2156518-2156786 7 aop FBtr0077851|FBtr0330658|FBtr0077850 2156482|2156482|2156482 2158164|2158164|2158164 TCTTCCA 7mer-A1 dme-miR-7-5p 2L - 2156529 2156643 3'utr aop FlyBase G5437.1 GTTTTTCGTACGCCTTAAGTTTAAACACCGCCAATAGCTAATAATTAGCACTCTAGTGTCGCCACAATACCTGTTCTTCCATTGAAAACGTTATCTTTCGATCAATACATAATTT 76 2156570 0.776862656 17 76 540 1 2.033423755 0.12037037 0.368421053 0.555555556 76 0 0 108 2L:2156529-2156643 7 91 91 FBgn0000097 634.18 16.10666667 24.79666667 0.143492384 5.649834437 3.669848098 1 1 1 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 2157269 2157275 - 2L_2157269_2157275_- 0.796133222 0.69964221 0.747887716 0.06822944 aop FBtr0077850|FBtr0077850|FBtr0077850|FBtr0330658|FBtr0330658|FBtr0330658|FBtr0330659|FBtr0330659|FBtr0330659|FBtr0077851|FBtr0077851|FBtr0077851 2156482|2156482|2156482|2156482|2156482|2156482|2156790|2156790|2156790|2156482|2156482|2156482 2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164 2L - 2157214 2157287 5'utr aop FlyBase G6956.1 AAATTGATTTCGTGTGATAACAACAGAATTATCTTTGATTCACATTGGCTGAATGCTAACGAAACCAGAGCAGT 12 2157282 0.977306607 11 12 78 1 1.255272505 0.055555556 0.333333333 0.555555556 12 0 0 18 2L:2157214-2157287 7 aop FBtr0330659|FBtr0330659|FBtr0330659|FBtr0077851|FBtr0077851|FBtr0077851|FBtr0330658|FBtr0330658|FBtr0330658|FBtr0077850|FBtr0077850|FBtr0077850 2156790|2156790|2156790|2156482|2156482|2156482|2156482|2156482|2156482|2156482|2156482|2156482 2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164|2158164 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 2157222 2157288 5'utr aop FlyBase G5442.1 CAAATTGATTTCGTGTGATAACAACAGAATTATCTTTGATTCACATTGGCTGAATGCTAACGAAACC 14 2157283 0.98809634 8 11 102 0.833333333 0.698970004 0.166666667 0.5 0.708333333 14 1 3 20 2L:2157222-2157288 7 10 92 FBgn0000097 634.18 16.10666667 24.79666667 0.015768394 0.620860927 0.403280011 7 8 7.5 0.5 dme-miR-305-3p 8mer-A1 ATGTGCCA 2L 2157603 2157610 - 2L_2157603_2157610_- 0.601450804 0.552208838 0.576829821 0.034819352 aop FBtr0077850|FBtr0330660|FBtr0330658|FBtr0330659|FBtr0077851 2156482|2157425|2156482|2156790|2156482 2158164|2158164|2158164|2158164|2158164 2L - 2157588 2157859 3'utr aop FlyBase G6958.1 AATTCAATTCTTGATCAAAGGCTTCTTCTAACCATTGCTGCTTTATACTTTCTTTGCGGCTGTCAAACGACCTTTCCGACTTTCTGTACATAGAAATCACATCTGCATAAACCAACAAACAATCATACATAAATACATTTATTTTATACATCAAGCGTATTTATTAAGCTAAGCTAAGCAAGAGCAGAGTGCATGTAATTTCGTTGTTGTAAGTAGATTTCTTGAGCCGGCGCAGCGCAGCCTTCGATTATGTGCCAATTTCTACATTTATC 54 2157611 0.985471234 31 49 409 0.869565217 1.477121255 0.202898551 0.148148148 0.333333333 54 8 1 60 2L:2157588-2157859 8 aop FBtr0330659|FBtr0077851|FBtr0330660|FBtr0330658|FBtr0077850 2156790|2156482|2157425|2156482|2156482 2158164|2158164|2158164|2158164|2158164 ATGTGCCA 8mer-A1 dme-miR-305-3p 2L - 2157584 2157694 3'utr aop FlyBase G5445.1 AAGCTAAGCTAAGCAAGAGCAGAGTGCATGTAATTTCGTTGTTGTAAGTAGATTTCTTGAGCCGGCGCAGCGCAGCCTTCGATTATGTGCCAATTTCTACATTTATCAAAC 32 2157637 0.965322325 13 30 157 0.976190476 1.311753861 0.166666667 0.28125 0.452380952 32 0 1 41 2L:2157584-2157694 8 9 93 FBgn0000097 634.18 16.10666667 24.79666667 0.014191554 0.558774834 0.36295201 1 27 14 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 21646975 21646981 + 2L_21646975_21646981_+ 0.392437919 0.570935129 0.481686524 0.126216581 Ac3 FBtr0085897|FBtr0085897|FBtr0085897 21646824|21646824|21646824 21647964|21647964|21647964 2L + 21646936 21646990 3'utr Ac3 FlyBase G5931.1 ATTATTTTTGCAATAAGTTAGGTTTTGCCTCAGTGTTCGTGTGATATTCCATGCA 6 21646970 0.991536658 4 6 66 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2L:21646936-21646990 7 Ac3 FBtr0085897|FBtr0085897|FBtr0085897 21646824|21646824|21646824 21647964|21647964|21647964 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 21646955 21646990 3'utr Ac3 FlyBase G4604.1 AGGTTTTGCCTCAGTGTTCGTGTGATATTCCATGCA 6 21646972 0.762916706 3 5 62 0.727272727 0.903089987 0.272727273 0.666666667 0.818181818 6 3 0 8 2L:21646955-21646990 7 5.5 94 FBgn0023416 614.5733333 23.08666667 35.21333333 0.008949298 0.238232746 0.156190837 5 3 4 0.5 dme-miR-980-3p 7mer-A1 GCAGCTA 2L 21647196 21647202 + 2L_21647196_21647202_+ 0.606148925 0.587230637 0.596689781 0.013377258 Ac3 FBtr0085897 21646824 21647964 2L + 21647167 21647216 3'utr Ac3 FlyBase G5933.1 AGCTCTGTAATATTTAAGTGATTCGCTTTGCAGCTAATTGATGTGCAGAT 62 21647194 0.78478928 6 59 620 0.955882353 1.511883361 0.352941176 0.080645161 0.161764706 62 2 1 65 2L:21647167-21647216 7 Ac3 FBtr0085897 21646824 21647964 GCAGCTA 7mer-A1 dme-miR-980-3p 2L + 21647170 21647216 3'utr Ac3 FlyBase G4606.1 TCTGTAATATTTAAGTGATTCGCTTTGCAGCTAATTGATGTGCAGAT 41 21647193 0.796142289 5 41 432 1 1.755874856 0.333333333 0.268292683 0.473684211 41 0 0 57 2L:21647170-21647216 7 51.5 95 FBgn0023416 614.5733333 23.08666667 35.21333333 0.083797974 2.230724805 1.462514199 2 3 2.5 0.5 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2L 21664320 21664326 - 2L_21664320_21664326_- 0.819967134 0.821669218 0.820818176 0.001203566 CG2225 FBtr0085917|FBtr0304885|FBtr0085915|FBtr0085914|FBtr0332967|FBtr0100618|FBtr0085918 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 2L - 21664178 21664371 3'utr CG2225 FlyBase G12241.1 GAAGTTGAGTGGTTGGAAAGGAAAATTGCAATATGTAAACGTTTACTAGTCATTAAATATAAAAAATGAACCATAAAAAATGTATAAGAAAGATAACATATTTTTTATTAACACTCAGTGGATGCCAAAAACATAAATATTGGAATCATTTTATCAGCGGGAGCTGTGGCACTCAAAAACAAGATAAAATTATT 108 21664328 0.983677919 21 99 767 0.9375 1.77815125 0.2578125 0.157407407 0.2890625 108 7 1 120 2L:21664178-21664371 7 CG2225 FBtr0100618|FBtr0085918|FBtr0085914|FBtr0332967|FBtr0304885|FBtr0085915|FBtr0085917 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 21664296 21664373 3'utr CG2225 FlyBase G9377.1 ATGAAGTTGAGTGGTTGGAAAGGAAAATTGCAATATGTAAACGTTTACTAGTCATTAAATATAAAAAATGAACCATAA 51 21664319 0.87925287 9 41 369 0.829268293 1.355387658 0.317073171 0.450980392 0.658536585 51 12 2 68 2L:21664296-21664373 7 59 96 FBgn0032957 1484.293333 32.49333333 50.1 0.039749555 1.815757078 1.177644711 2 -7 -2.5 0.5 dme-miR-14-3p 8mer-A1 AAGACTGA 2L 21665191 21665198 - 2L_21665191_21665198_- 0.537758021 0.60954788 0.57365295 0.050763125 CG2225 FBtr0085917|FBtr0304885|FBtr0085915|FBtr0085914|FBtr0332967|FBtr0100618|FBtr0085918 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 2L - 21665183 21665242 3'utr CG2225 FlyBase G12245.1 GAAGACAATTGGAAAATTCAAATGCACAAAAGCCGTGAATCGTAAAGACTGACAATGAAA 21 21665200 0.940429867 3 20 79 0.958333333 1.361727836 0.375 0.142857143 0.25 21 1 0 23 2L:21665183-21665242 8 CG2225 FBtr0100618|FBtr0085918|FBtr0085914|FBtr0332967|FBtr0304885|FBtr0085915|FBtr0085917 21663804|21663804|21663804|21663804|21663804|21663804|21663804 21665461|21665461|21665461|21665461|21665461|21665461|21665461 AAGACTGA 8mer-A1 dme-miR-14-3p 2L - 21665179 21665223 3'utr CG2225 FlyBase G9381.1 AAATGCACAAAAGCCGTGAATCGTAAAGACTGACAATGAAAAAAA 12 21665200 0.943823986 4 11 40 0.85 1.230448921 0.35 0.333333333 0.6 12 3 0 17 2L:21665179-21665223 8 14.5 97 FBgn0032957 1484.293333 32.49333333 50.1 0.009768959 0.446245384 0.289421158 2 2 2 0.5 dme-miR-34-5p 6mer3-8 CACTGC 2L 21740337 21740342 - 2L_21740337_21740342_- 0.800682657 0.898648439 0.849665548 0.069272211 step FBtr0332471 21740039 21741582 2L - 21740316 21740384 3'utr step FlyBase G12275.1 AATTGCAATATTATAAATACTTTAGTTTGATTTGTACATATACACTGCTGTGCACTATCCATTTCGTAT 8 21740338 0.979079289 6 8 66 1 1.113943352 0.153846154 0.5 0.692307692 8 0 0 13 2L:21740316-21740384 6 step FBtr0332471 21740039 21741582 CACTGC 6mer3-8 dme-miR-34-5p 2L - 21740322 21740363 3'utr step FlyBase G9402.1 TTAGTTTGATTTGTACATATACACTGCTGTGCACTATCCATT 7 21740338 0.741299185 5 7 56 1 1.041392685 0.090909091 0.428571429 0.636363636 7 0 0 11 2L:21740322-21740363 6 5.5 98 FBgn0086779 2401.73 84.77 129.5966667 0.002290016 0.064881444 0.042439363 -4 -4 -4 0.5 dme-miR-14-3p 7mer-A1 AGACTGA 2L 21740514 21740520 - 2L_21740514_21740520_- 0.485438776 0.507073083 0.49625593 0.01529776 step FBtr0332471 21740039 21741582 2L - 21740505 21740702 3'utr step FlyBase G12276.2 AAGAATGTATAAATTGCCCGTTGATGTGTAAGCAAAAAACTATAAGTCAAAAAATCATCAAACAAGAACTCTGTTGCCAGCACTGATTTTATAGTAGCCTAAAGATGCTATTAGAAAATAGTTATAGTAAATTGTGTGTCGTGGCGCTGTGATATCATTGATAGGAAAGAGCTTCTGTGTTGAGACTGAAAAAACATT 859 21740523 0.81204467 35 833 5454 0.968335036 2.374748346 0.233912155 0.124563446 0.231869254 859 28 3 948 2L:21740505-21740702 7 step FBtr0332471 21740039 21741582 AGACTGA 7mer-A1 dme-miR-14-3p 2L - 21740505 21740649 3'utr step FlyBase G9404.1 ATCATCAAACAAGAACTCTGTTGCCAGCACTGATTTTATAGTAGCCTAAAGATGCTATTAGAAAATAGTTATAGTAAATTGTGTGTCGTGGCGCTGTGATATCATTGATAGGAAAGAGCTTCTGTGTTGAGACTGAAAAAACATT 500 21740523 0.732976311 24 482 3131 0.966942149 2.147367108 0.252066116 0.34 0.545454545 500 20 4 702 2L:21740505-21740649 7 610 99 FBgn0086779 2401.73 84.77 129.5966667 0.253983587 7.195941961 4.706911186 3 3 3 0.5 dme-miR-1008-3p 6mer2-7 GCTGTG 2L 22125633 22125638 + 2L_22125633_22125638_+ 0.532080552 0.58154886 0.556814706 0.03497937 CG3651 FBtr0331657 22124938 22126614 2L + 22125606 22125664 3'utr CG3651 FlyBase G6026.1 AGTGCTTAAACTTTTCTCATAAGGCTGGCTGTGTTCTGCACGTCGTTCAAGGGCCGTGA 46 22125629 0.898311189 6 44 432 0.964285714 1.431363764 0.375 0.152173913 0.303571429 46 1 1 54 2L:22125606-22125664 6 CG3651 FBtr0331657 22124938 22126614 GCTGTG 6mer2-7 dme-miR-1008-3p 2L + 22125589 22125652 3'utr CG3651 FlyBase G4689.1 TTAACGACTGCAATCCAAGTGCTTAAACTTTTCTCATAAGGCTGGCTGTGTTCTGCACGTCGTT 24 22125631 0.988125073 8 23 207 0.90625 0.860338007 0.40625 0.208333333 0.40625 24 0 3 29 2L:22125589-22125652 6 33.5 100 FBgn0032974 1358.31 57.56666667 88.28333333 0.024663 0.58193399 0.379460072 4 2 3 0.5 dme-miR-252-5p 8mer-m1 GTACTTAG 2L 2220526 2220533 + 2L_2220526_2220533_+ 0.534545546 0.548531963 0.541538755 0.009889949 mio FBtr0077835 2220409 2220625 2L + 2220463 2220553 3'utr mio FlyBase G1198.1 ATGCATTAAGTTGTTGATTTGTTCCAAACGCGTGCGCCTTAAACAAACTCAGAAGTGTTCATTGTACTTAGACAAGGGATGTGCCCGTAGC 29 2220524 0.757774811 7 26 191 0.948717949 1.267171728 0.153846154 0.172413793 0.384615385 29 1 1 37 2L:2220463-2220553 8 mio FBtr0077835 2220409 2220625 GTACTTAG 8mer-m1 dme-miR-252-5p 2L + 2220478 2220550 3'utr mio FlyBase G938.1 GATTTGTTCCAAACGCGTGCGCCTTAAACAAACTCAGAAGTGTTCATTGTACTTAGACAAGGGATGTGCCCGT 16 2220525 0.979047126 6 15 100 0.956521739 1.342422681 0.347826087 0.3125 0.52173913 16 1 0 22 2L:2220478-2220550 8 18.5 101 FBgn0031399 136 5.556666667 8.516666667 0.136029412 3.329334133 2.17221135 2 1 1.5 0.5 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 2230248 2230254 + 2L_2230248_2230254_+ 0.471621137 0.487542554 0.479581846 0.011258201 sau FBtr0100673|FBtr0077840 2230125|2230125 2231099|2231088 2L + 2230223 2230279 3'utr sau FlyBase G1218.2 TTGCTGCTTTTGTTTTAGAAACTTTGCTGTGAGTGGAACCGAATCGGGCGATAGGAT 393 2230246 0.736067226 8 377 2570 0.972457627 1.883661435 0.527542373 0.152671756 0.294491525 393 8 5 459 2L:2230223-2230279 7 sau FBtr0100674|FBtr0077840|FBtr0100673 2230125|2230125|2230125 2230413|2231088|2231099 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L + 2230188 2230299 3'utr sau FlyBase G953.1 AACACAGAAATACAGACCCACATCTGGAATACATTTTGCTGCTTTTGTTTTAGAAACTTTGCTGTGAGTGGAACCGAATCGGGCGATAGGATTTTCTTAAATGGCAACCACC 288 2230246 0.974789341 16 282 1886 0.967667436 1.844062773 0.51039261 0.361111111 0.575057737 288 9 5 419 2L:2230188-2230299 7 328 102 FBgn0267378 3863.503333 238.82 367.2833333 0.084897041 1.373419312 0.893043518 2 2 2 0.5 dme-miR-1003-3p 8mer-A1 ATGTGAGA 2L 22992406 22992413 + 2L_22992406_22992413_+ 0.622986951 0.614201983 0.618594467 0.006211933 cta FBtr0334157 22991942 22992951 2L + 22992380 22992456 3'utr cta FlyBase G6224.1 CGTTTTGAAAAGCCATTAACCAATTTATGTGAGATTTTAAAAGCAGCTGAAATATTTTTAAATGGTCGTTAAAAGTA 48 22992404 0.827311584 10 43 400 0.870967742 1.73239376 0.064516129 0.229166667 0.403225806 48 8 0 54 2L:22992380-22992456 8 cta FBtr0334157 22991942 22992951 ATGTGAGA 8mer-A1 dme-miR-1003-3p 2L + 22992365 22992456 3'utr cta FlyBase G4851.1 TTTTGCGTGCATCTTCGTTTTGAAAAGCCATTAACCAATTTATGTGAGATTTTAAAAGCAGCTGAAATATTTTTAAATGGTCGTTAAAAGTA 41 22992404 0.988034305 15 38 348 0.901639344 1.740362689 0.098360656 0.390243902 0.590163934 41 6 0 55 2L:22992365-22992456 8 37 103 FBgn0000384 1592.86 81.62333333 124.9 0.023228658 0.453301752 0.29623699 2 2 2 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2L 2422637 2422642 + 2L_2422637_2422642_+ 0.803026468 0.781920793 0.792473631 0.014923984 CG9886 FBtr0077770|FBtr0077770|FBtr0077770|FBtr0335462|FBtr0335462|FBtr0335462 2422414|2422414|2422414|2422414|2422414|2422414 2422910|2422910|2422910|2424647|2424647|2424647 2L + 2422622 2422648 3'utr CG9886 FlyBase G1241.1 AAATTCAAATAATTTTGTGATCTTTAT 5 2422635 0.798768526 4 5 49 1 0.698970004 0 0 0 5 0 0 5 2L:2422622-2422648 6 CG9886 FBtr0077770|FBtr0077770|FBtr0077770|FBtr0335462|FBtr0335462|FBtr0335462 2422414|2422414|2422414|2422414|2422414|2422414 2422910|2422910|2422910|2424647|2424647|2424647 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 2422626 2422656 3'utr CG9886 FlyBase G971.1 TCAAATAATTTTGTGATCTTTATGCTCTGAG 5 2422636 0.685291148 3 4 49 0.857142857 0.77815125 0.857142857 0.4 0.571428571 5 1 0 6 2L:2422626-2422656 6 4.5 104 FBgn0031428 49.66666667 2.643333333 4.073333333 0.090604027 1.702395965 1.104746318 2 1 1.5 0.5 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 2497415 2497422 + 2L_2497415_2497422_+ 0.621946128 0.607953638 0.614949883 0.009894192 oaf FBtr0077777|FBtr0077780|FBtr0077778 2496696|2497161|2496696 2498846|2498846|2498454 2L + 2497304 2497462 3'utr oaf FlyBase G1249.1 TATACTACAGCAAAAAAGGAGTAAAACGAAATAAATGTAAAAAAGTGCTTCTGTATACTATGTATATATATGTATATTTAACGATGATTAGCTTTTAGCCAGCTTACGTTTTACGCTTATGCCGGATTTAAGTTTAGACCTAGATTAGGTGTCCTTATT 46 2497391 0.989282309 15 44 412 0.962962963 1.716003344 0.240740741 0.152173913 0.277777778 46 2 0 52 2L:2497304-2497462 8 oaf FBtr0077780|FBtr0077778|FBtr0077777 2497161|2496696|2496696 2498846|2498454|2498846 TACGCTTA 8mer-A1 dme-miR-965-3p 2L + 2497373 2497467 3'utr oaf FlyBase G976.1 ATGTATATTTAACGATGATTAGCTTTTAGCCAGCTTACGTTTTACGCTTATGCCGGATTTAAGTTTAGACCTAGATTAGGTGTCCTTATTTAATT 21 2497414 0.988198333 6 20 189 0.970588235 1.217483944 0.411764706 0.428571429 0.647058824 21 0 1 33 2L:2497373-2497467 8 17 105 FBgn0011818 255.6 10.51666667 16.17333333 0.066510172 1.616481775 1.051112943 24 1 12.5 0.5 dme-bantam-3p 6mer3-8 TGATCT 2L 2497552 2497557 + 2L_2497552_2497557_+ 0.67179343 0.682703922 0.677248676 0.007714889 oaf FBtr0077777|FBtr0077780|FBtr0077778 2496696|2497161|2496696 2498846|2498846|2498454 2L + 2497534 2497563 3'utr oaf FlyBase G1250.1 TCCTTTCCTACTACAGTGTGATCTTTTATC 10 2497545 0.769796121 5 10 88 1 1.176091259 0 0.3 0.533333333 10 0 0 15 2L:2497534-2497563 6 oaf FBtr0077780|FBtr0077778|FBtr0077777 2497161|2496696|2496696 2498846|2498454|2498846 TGATCT 6mer3-8 dme-bantam-3p 2L + 2497531 2497563 3'utr oaf FlyBase G977.1 TAATCCTTTCCTACTACAGTGTGATCTTTTATC 9 2497546 0.782081952 4 9 97 1 1.113943352 0 0.444444444 0.615384615 9 0 0 13 2L:2497531-2497563 6 9.5 106 FBgn0011818 255.6 10.51666667 16.17333333 0.037167449 0.903328051 0.587386645 7 6 6.5 0.5 dme-miR-308-3p 7mer-m1 TGTGATT 2L 2763587 2763593 - 2L_2763587_2763593_- 0.501394423 0.491768349 0.496581386 0.006806681 CG3077 FBtr0335129 2763414 2764305 2L - 2763565 2763609 3'utr CG3077 FlyBase G7083.1 TTCCAGCCCAATGTCTTGTGATTGCTTTTTCAATAAATAAATATT 58 2763594 0.601201452 6 54 474 0.941176471 1.329058719 0.029411765 0.155172414 0.279411765 58 2 2 64 2L:2763565-2763609 7 CG3077 FBtr0335129 2763414 2764305 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 2763555 2763611 3'utr CG3077 FlyBase G5559.1 TCTTCCAGCCCAATGTCTTGTGATTGCTTTTTCAATAAATAAATATTATACTCAAGT 35 2763594 0.986368474 7 34 284 0.961538462 1.22184875 0.038461538 0.428571429 0.615384615 35 0 2 50 2L:2763555-2763611 7 44.5 107 FBgn0031457 325.67 20.19 30.60333333 0.136641385 2.204061417 1.454089968 1 1 1 0.5 dme-miR-283-5p 6mer3-8 TGATAT 2L 2763811 2763816 - 2L_2763811_2763816_- 0.968158227 0.828931364 0.898544795 0.098448214 CG3077 FBtr0335129 2763414 2764305 2L - 2763784 2763838 3'utr CG3077 FlyBase G7084.1 ATGTTTCATGTTACGTATTGTTTGATATCTCTTCAATCGTCTAGTTTGTAGTTTG 11 2763828 0.816704759 5 9 122 0.769230769 1 0.076923077 0.181818182 0.307692308 11 3 0 10 2L:2763784-2763838 6 CG3077 FBtr0335129 2763414 2764305 TGATAT 6mer3-8 dme-miR-283-5p 2L - 2763764 2763884 3'utr CG3077 FlyBase G5560.1 CGTAACGTACTGCTTTGGTAACTTAAAGGTTAGTCTAAGCATATTTATGTTTCATGTTACGTATTGTTTGATATCTCTTCAATCGTCTAGTTTGTAGTTTGTACCCAGTGGGAGTTGTGAT 18 2763817 0.992229097 11 14 171 0.884615385 1.361727836 0.269230769 0.333333333 0.538461538 18 3 0 23 2L:2763764-2763884 6 6.5 108 FBgn0031457 325.67 20.19 30.60333333 0.019958854 0.321941555 0.212395164 12 1 6.5 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 2868509 2868515 + 2L_2868509_2868515_+ 0.729983472 0.731560981 0.730772227 0.001115461 CG2991 FBtr0077626|FBtr0077626|FBtr0077626|FBtr0077627|FBtr0077627|FBtr0077627|FBtr0077625|FBtr0077625|FBtr0077625 2867666|2867666|2867666|2867666|2867666|2867666|2867666|2867666|2867666 2868548|2868548|2868548|2868548|2868548|2868548|2868548|2868548|2868548 2L + 2868322 2868534 3'utr CG2991 FlyBase G1368.1 AAGTTTACTCCTTAAGAAACTGATTTGTATAAGCTGCGCCCATATATACATACACACGAACATATATAATATATATATATAAATTTTATTGTAGTTACTACACAAAATTTGTCAAAGCAAAGAAAAACAAAACAAAATCCACAAAAGGAAAGAATCCAACATACAATTTAAGTTACCATACAATTTTTGTGATAAAACTAACAAATAAAATAC 236 2868507 0.999997792 26 221 1812 0.940972222 1.65481804 0.038194444 0.177966102 0.326388889 236 12 5 271 2L:2868322-2868534 7 CG2991 FBtr0077627|FBtr0077627|FBtr0077627|FBtr0077625|FBtr0077625|FBtr0077625|FBtr0077626|FBtr0077626|FBtr0077626 2867666|2867666|2867666|2867666|2867666|2867666|2867666|2867666|2867666 2868548|2868548|2868548|2868548|2868548|2868548|2868548|2868548|2868548 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 2868490 2868533 3'utr CG2991 FlyBase G1072.1 TAAGTTACCATACAATTTTTGTGATAAAACTAACAAATAAAATA 112 2868507 0.651175358 8 108 917 0.95483871 1.693140461 0 0.276785714 0.477419355 112 5 2 148 2L:2868490-2868533 7 146.5 109 FBgn0031474 1557.266667 62.85666667 96.35333333 0.094075089 2.330699475 1.520445582 2 2 2 0.5 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 2877098 2877105 - 2L_2877098_2877105_- 0.568680568 0.565645635 0.567163102 0.002146069 Prx6005 FBtr0077684 2877089 2877187 2L - 2877090 2877115 3'utr Prx6005 FlyBase G7126.1 CAATAAAGTATACGCTTACAACCGTA 8 2877105 0.758865998 2 6 28 0.916666667 1.041392685 0 0.25 0.5 8 1 0 11 2L:2877090-2877115 8 Prx6005 FBtr0077684 2877089 2877187 TACGCTTA 8mer-A1 dme-miR-965-3p 2L - 2877090 2877116 3'utr Prx6005 FlyBase G5590.1 ACAATAAAGTATACGCTTACAACCGTA 6 2877105 0.731785716 2 6 28 1 0.903089987 0 0.333333333 0.5 6 0 0 8 2L:2877090-2877116 8 6 110 FBgn0031479 67.29333333 9.753333333 14.81333333 0.089161878 0.615174299 0.405040504 0 0 0 0.5 dme-miR-980-3p 7mer-A1 GCAGCTA 2L 2980009 2980015 - 2L_2980009_2980015_- 0.667749818 0.665505497 0.666627658 0.00158696 Chd1 FBtr0331654|FBtr0305980|FBtr0077674 2979560|2979697|2979697 2980175|2980175|2980175 2L - 2979964 2980069 3'utr Chd1 FlyBase G7171.1 ACCCGCATACAGTACGTTAAGCGTAGCTCCATACACCTGTACAAGTAATTCCTAGCAGCTAACTATACTTCTATAAATGACTATACATCCGATCGCACAGAGGGCC 21 2980038 0.965034444 14 21 120 1 1.380211242 0 0.142857143 0.25 21 0 0 24 2L:2979964-2980069 7 Chd1 FBtr0331654|FBtr0305980|FBtr0077674 2979560|2979697|2979697 2980175|2980175|2980175 GCAGCTA 7mer-A1 dme-miR-980-3p 2L - 2979957 2980065 3'utr Chd1 FlyBase G5623.1 GCATACAGTACGTTAAGCGTAGCTCCATACACCTGTACAAGTAATTCCTAGCAGCTAACTATACTTCTATAAATGACTATACATCCGATCGCACAGAGGGCCGGCATTG 21 2980038 0.972356882 13 20 111 0.964285714 1.431363764 0.5 0.238095238 0.428571429 21 1 0 27 2L:2979957-2980065 7 6 111 FBgn0250786 1504.04 28.31666667 43.57333333 0.003989256 0.211889347 0.137698898 23 23 23 0.5 dme-miR-999-3p 7mer-A1 GTTAACA 2L 2989543 2989549 + 2L_2989543_2989549_+ 0.724447104 0.805062485 0.764754794 0.057003696 Bem46 FBtr0077643 2989510 2990075 2L + 2989522 2989560 3'utr Bem46 FlyBase G1427.1 ATCAAGTGTTCAATTGACTGTGTTAACACTGCGAATGGT 21 2989536 0.723940947 6 21 174 1 1.397940009 0.16 0.142857143 0.28 21 0 0 25 2L:2989522-2989560 7 Bem46 FBtr0077643 2989510 2990075 GTTAACA 7mer-A1 dme-miR-999-3p 2L + 2989516 2989552 3'utr Bem46 FlyBase G1112.1 GAATACATCAAGTGTTCAATTGACTGTGTTAACACTG 15 2989536 0.947763754 6 13 124 0.875 0.84509804 0.041666667 0.4 0.625 15 1 2 21 2L:2989516-2989552 7 18 112 FBgn0025109 189.0366667 13.54 20.76666667 0.095219622 1.329394387 0.866773676 7 7 7 0.5 dme-miR-317-3p 7mer-A1 GTGTTCA 2L 2998524 2998530 + 2L_2998524_2998530_+ 0.549578938 0.625027624 0.587303281 0.053350287 CG3558 FBtr0331653|FBtr0077644|FBtr0273230|FBtr0077645 2998247|2998247|2998247|2998247 2998726|2998726|2998726|2998726 2L + 2998465 2998535 3'utr CG3558 FlyBase G1448.1 GCGTTAAACAAATAGATTTAGGTTAAATGTTTTAAGTGAATCGGGACGGTGGATCTTAAGTGTTCAGATGT 17 2998520 0.981275975 8 12 134 0.761904762 0.726998728 0.666666667 0.176470588 0.333333333 17 3 2 16 2L:2998465-2998535 7 CG3558 FBtr0273230|FBtr0077645|FBtr0331653|FBtr0077644 2998247|2998247|2998247|2998247 2998726|2998726|2998726|2998726 GTGTTCA 7mer-A1 dme-miR-317-3p 2L + 2998474 2998546 3'utr CG3558 FlyBase G1129.1 AAATAGATTTAGGTTAAATGTTTTAAGTGAATCGGGACGGTGGATCTTAAGTGTTCAGATGTAAACAAATATT 16 2998519 0.980150922 9 15 106 0.954545455 1.322219295 0.590909091 0.3125 0.5 16 1 0 21 2L:2998474-2998546 7 11.5 113 FBgn0025681 2409.06 69.7 106.8566667 0.004773646 0.164992826 0.1076208 4 5 4.5 0.5 dme-miR-2a-2-5p 7mer-m1 GATGAGG 2L 3147406 3147412 - 2L_3147406_3147412_- 0.503880769 0.524383412 0.514132091 0.014497527 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 2L - 3147378 3147481 stop_codon Mad FlyBase G7257.1 TGGCTGGACAAGGTGCTCACCCAAATGGGCTCTCCGCATAATGCAATTAGTTCGGTATCCTAAGCTTAAGATGAGGCTCGAGTCCTCAATGGAGACGGAAGAGA 24 3147410 0.967203984 9 23 127 0.965517241 1.146128036 0.172413793 0.208333333 0.344827586 24 0 1 28 2L:3147378-3147481 7 Mad FBtr0077616|FBtr0332372 3146450|3146054 3147418|3147418 GATGAGG 7mer-m1 dme-miR-2a-2-5p 2L - 3147351 3147459 stop_codon Mad FlyBase G5677.1 AAATGGGCTCTCCGCATAATGCAATTAGTTCGGTATCCTAAGCTTAAGATGAGGCTCGAGTCCTCAATGGAGACGGAAGAGAAGGAACACAAAACCGGTAGCTAAATGA 19 3147410 0.994928317 8 18 109 0.942857143 1.51851394 0.2 0.578947368 0.771428571 19 2 0 33 2L:3147351-3147459 7 9 114 FBgn0011648 490.6766667 21.49 32.97333333 0.018342017 0.418799442 0.272947837 -2 -2 -2 0.5 dme-miR-283-5p 6mer3-8 TGATAT 2L 3168344 3168349 + 2L_3168344_3168349_+ 0.840530939 0.826724753 0.833627846 0.009762387 Hydr2 FBtr0332371|FBtr0077576|FBtr0308315 3168200|3168200|3168200 3168988|3168988|3169462 2L + 3168295 3168389 3'utr Hydr2 FlyBase G1532.1 TCGGAACGGAAGAGAGCCCGAAAGACCCCATACATATAGTTCTAACATATGATATCGTTGTGCAGCAATTATAAATTATCAGCCGCGCAAGCATA 19 3168344 0.978478789 10 19 126 1 1.447158031 0.071428571 0.368421053 0.571428571 19 0 0 28 2L:3168295-3168389 6 Hydr2 FBtr0308315|FBtr0077576|FBtr0332371 3168200|3168200|3168200 3169462|3168988|3168988 TGATAT 6mer3-8 dme-miR-283-5p 2L + 3168222 3168365 3'utr Hydr2 FlyBase G1204.1 CGCATACACGACTATTTAACGCTTCTGTGTCAAAATTGGTTGTCGCTGTCGAATATAAATCTTTGAAGAACCATCGGAACGGAAGAGAGCCCGAAAGACCCCATACATATAGTTCTAACATATGATATCGTTGTGCAGCAATTA 33 3168351 0.980669903 16 32 232 0.94 1.672097858 0.46 0.363636364 0.58 33 3 0 47 2L:3168222-3168365 6 13 115 FBgn0014906 1672.66 89.72666667 137.1866667 0.007772052 0.144884464 0.094761396 0 -7 -3.5 0.5 dme-miR-999-3p 7mer-m8 AGTTAAC 2L 3168520 3168526 + 2L_3168520_3168526_+ 0.457784133 0.384797758 0.421290945 0.051609108 Hydr2 FBtr0332371|FBtr0077576|FBtr0308315 3168200|3168200|3168200 3168988|3168988|3169462 2L + 3168484 3168563 3'utr Hydr2 FlyBase G1533.2 AACATACAATGTATCAGTTGAACTCGTACCTTAGTTAGTTAACGCGACCACATGTATCCATGTACTTATGTCTAAGCAAA 91 3168518 0.772219073 15 84 750 0.946902655 1.728353782 0.17699115 0.131868132 0.300884956 91 5 1 107 2L:3168484-3168563 7 Hydr2 FBtr0308315|FBtr0077576|FBtr0332371 3168200|3168200|3168200 3169462|3168988|3168988 AGTTAAC 7mer-m8 dme-miR-999-3p 2L + 3168444 3168561 3'utr Hydr2 FlyBase G1205.1 GAACGATTTTTATGCTTTTTAATGACTTTTTGAAGAGCCAAACATACAATGTATCAGTTGAACTCGTACCTTAGTTAGTTAACGCGACCACATGTATCCATGTACTTATGTCTAAGCA 56 3168517 0.985954201 15 52 438 0.91011236 1.063386979 0.101123596 0.339285714 0.584269663 56 2 6 81 2L:3168444-3168561 7 44.5 116 FBgn0014906 1672.66 89.72666667 137.1866667 0.026604331 0.495950665 0.324375547 2 3 2.5 0.5 dme-bantam-3p 7mer-m8 TGATCTC 2L 3360367 3360373 - 2L_3360367_3360373_- 0.482720578 0.508246961 0.495483769 0.018049891 CG34394 FBtr0332409|FBtr0306333|FBtr0306335|FBtr0112638|FBtr0112641|FBtr0112639 3358638|3358638|3358638|3358638|3358638|3358638 3360717|3360717|3360717|3360717|3360717|3360717 2L - 3360306 3360421 3'utr CG34394 FlyBase G7282.1 AGGTCTGATAGTTTTGAAACGCACTGCACCAGCGGGCATTTGTTACTTTGATCTCCTAGTTAGCAATACACAAAACCCAAACTTGTGCATGTTCTATTCTCTCGGATTAAGATACA 496 3360374 0.807763879 18 476 5025 0.961148649 2.056142262 0.336148649 0.157258065 0.293918919 496 19 4 569 2L:3360306-3360421 7 CG34394 FBtr0112638|FBtr0306335|FBtr0306333|FBtr0332409|FBtr0112639|FBtr0112641 3358638|3358638|3358638|3358638|3358638|3358638 3360717|3360717|3360717|3360717|3360717|3360717 TGATCTC 7mer-m8 dme-bantam-3p 2L - 3360345 3360423 3'utr CG34394 FlyBase G5693.1 AAAGGTCTGATAGTTTTGAAACGCACTGCACCAGCGGGCATTTGTTACTTTGATCTCCTAGTTAGCAATACACAAAACC 266 3360374 0.720383739 16 249 2609 0.938931298 1.721928326 0.361323155 0.342105263 0.554707379 266 18 6 369 2L:3360345-3360423 7 367 117 FBgn0085423 1284.263333 25.49333333 39.12 0.285766938 14.3959205 9.381390593 1 1 1 0.5 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 3405151 3405157 - 2L_3405151_3405157_- 0.566158044 0.580864959 0.573511502 0.010399419 pgant2 FBtr0077592|FBtr0303992 3404458|3404458 3405576|3405576 2L - 3405145 3405180 3'utr pgant2 FlyBase G7299.1 ACTGTAACCCTAATGCAACCTTTGGCAGCTGATTAA 63 3405158 0.75787803 3 62 395 0.975308642 1.897627091 0.086419753 0.19047619 0.37037037 63 2 0 79 2L:3405145-3405180 7 pgant2 FBtr0077592|FBtr0303992 3404458|3404458 3405576|3405576 GGCAGCT 7mer-m8 dme-miR-980-3p 2L - 3405145 3405181 3'utr pgant2 FlyBase G5706.1 TACTGTAACCCTAATGCAACCTTTGGCAGCTGATTAA 60 3405158 0.740495215 5 59 373 0.978021978 1.949390007 0.131868132 0.366666667 0.582417582 60 2 0 89 2L:3405145-3405181 7 61.5 118 FBgn0031530 60.33333333 2.156666667 3.27 1.019337017 28.51622875 18.80733945 1 1 1 0.5 dme-miR-965-3p 7mer-m8 TACGCTT 2L 3453778 3453784 - 2L_3453778_3453784_- 0.558588953 0.618407719 0.588498336 0.042298208 Cog3 FBtr0077573 3453695 3453922 2L - 3453757 3453799 3'utr Cog3 FlyBase G7302.1 GTGTTAAAAACTATCTACGCTTTCCAAATGTAGACTTAACATT 14 3453784 0.751685691 4 12 103 0.875 0.84509804 0.375 0.142857143 0.25 14 1 1 14 2L:3453757-3453799 7 Cog3 FBtr0077573 3453695 3453922 TACGCTT 7mer-m8 dme-miR-965-3p 2L - 3453748 3453806 3'utr Cog3 FlyBase G5709.1 AAGATCCGTGTTAAAAACTATCTACGCTTTCCAAATGTAGACTTAACATTAATTTATTT 13 3453784 0.745647707 7 10 101 0.842105263 1.204119983 0.315789474 0.384615385 0.578947368 13 3 0 16 2L:3453748-3453806 7 11 119 FBgn0031536 124 5.03 7.693333333 0.088709677 2.186878728 1.429809359 0 0 0 0.5 dme-miR-8-3p 7mer-m8 CAGTATT 2L 345528 345534 + 2L_345528_345534_+ 0.460267236 0.459016738 0.459641987 0.000884237 Plc21C FBtr0078049|FBtr0078050|FBtr0330674|FBtr0078047|FBtr0330673|FBtr0078048 345447|345447|345447|345447|345447|345447 355566|347927|346255|346255|346255|346541 2L + 345515 345564 3'utr Plc21C FlyBase G717.1 AGTTGTTAGTCTTCAGTATTTACAGCAGAAACATAGGAATGAAAAGTCTT 12 345527 0.994932734 5 11 76 0.933333333 1.146128036 0.2 0.25 0.4 12 1 0 14 2L:345515-345564 7 Plc21C FBtr0330673|FBtr0078048|FBtr0330674|FBtr0078047|FBtr0078049|FBtr0078050 345447|345447|345447|345447|345447|345447 346255|346541|346255|346255|355566|347927 CAGTATT 7mer-m8 dme-miR-8-3p 2L + 345491 345555 3'utr Plc21C FlyBase G579.1 CCCTAGGATTAATTGTGGTTCTAAAGTTGTTAGTCTTCAGTATTTACAGCAGAAACATAGGAATG 9 345526 0.989069386 6 8 50 0.923076923 1.079181246 0.461538462 0.222222222 0.461538462 9 1 0 12 2L:345491-345555 7 7.5 120 FBgn0004611 260.3233333 5.52 8.483333333 0.028810326 1.358695652 0.884086444 1 2 1.5 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 3462415 3462420 - 2L_3462415_3462420_- 0.62879729 0.415104001 0.521950645 0.151103982 msl-2 FBtr0077571|FBtr0077571|FBtr0077571|FBtr0077570|FBtr0077570|FBtr0077570 3462216|3462216|3462216|3462216|3462216|3462216 3463265|3463265|3463265|3463265|3463265|3463265 2L - 3462400 3462446 3'utr msl-2 FlyBase G7309.1 AGATTGCTTTGCCCAAAATGTGGATGCTGTGAGCTAAAAAAAACCTT 15 3462422 0.9208458 6 13 86 0.9375 0.875061263 0.375 0.066666667 0.125 15 0 1 15 2L:3462400-3462446 6 msl-2 FBtr0077570|FBtr0077570|FBtr0077570|FBtr0077571|FBtr0077571|FBtr0077571 3462216|3462216|3462216|3462216|3462216|3462216 3463265|3463265|3463265|3463265|3463265|3463265 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 3462403 3462446 3'utr msl-2 FlyBase G5714.1 AGATTGCTTTGCCCAAAATGTGGATGCTGTGAGCTAAAAAAAAC 10 3462421 0.692380795 4 10 60 1 1.113943352 0.230769231 0.3 0.461538462 10 0 0 13 2L:3462403-3462446 6 12 121 FBgn0005616 482.6633333 15.65666667 24.13 0.02486205 0.766446668 0.497306258 2 1 1.5 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 3621106 3621111 + 2L_3621106_3621111_+ 0.673017328 0.57589984 0.624458584 0.068672443 Dot FBtr0339571|FBtr0339571|FBtr0339571|FBtr0077532|FBtr0077532|FBtr0077532 3621072|3621072|3621072|3621072|3621072|3621072 3621573|3621573|3621573|3621171|3621171|3621171 2L + 3621087 3621126 3'utr Dot FlyBase G1591.1 ACGCATGACTTGACAATTTCTGTGACAACAAATATATATA 17 3621104 0.636724767 6 16 116 0.947368421 1.255272505 0 0.117647059 0.210526316 17 1 0 18 2L:3621087-3621126 6 Dot FBtr0339571|FBtr0339571|FBtr0339571|FBtr0077532|FBtr0077532|FBtr0077532 3621072|3621072|3621072|3621072|3621072|3621072 3621573|3621573|3621573|3621171|3621171|3621171 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 3621080 3621128 3'utr Dot FlyBase G1254.1 AAGATTTACGCATGACTTGACAATTTCTGTGACAACAAATATATATATT 12 3621104 0.95693276 5 12 93 1 1.230448921 0 0.333333333 0.529411765 12 0 0 17 2L:3621080-3621128 6 13.5 122 FBgn0015663 146.7833333 8.573333333 13.06 0.091972295 1.574650078 1.033690658 2 2 2 0.5 dme-miR-932-5p 8mer-A1 GGAATTGA 2L 3622414 3622421 - 2L_3622414_3622421_- 0.636983913 0.62786546 0.632424686 0.006447682 for FBtr0089307|FBtr0089304|FBtr0089310|FBtr0089312|FBtr0089306|FBtr0089308|FBtr0089309|FBtr0100363 3622072|3622072|3622072|3622072|3622072|3622072|3622072|3622072 3622777|3622777|3622777|3622777|3622777|3622777|3622777|3622777 2L - 3622326 3622437 3'utr for FlyBase G7353.1 TGTGTCTAGTTCGCTTGGAATTGATGTAAATTGTAAGTAGGTCTGTGACTCTGTTTCAGAGCTCTGTTAGCCATGTGCATTGTATAAATTCAGCTATTTGTATCTATTAAAT 19 3622422 0.990417228 8 17 176 0.92 1.361727836 0.24 0.210526316 0.4 19 2 0 23 2L:3622326-3622437 8 for FBtr0100363|FBtr0089306|FBtr0089308|FBtr0089309|FBtr0089310|FBtr0089312|FBtr0089307|FBtr0089304 3622072|3622072|3622072|3622072|3622072|3622072|3622072|3622072 3622777|3622777|3622777|3622777|3622777|3622777|3622777|3622777 GGAATTGA 8mer-A1 dme-miR-932-5p 2L - 3622394 3622443 3'utr for FlyBase G5751.1 GATATATGTGTCTAGTTCGCTTGGAATTGATGTAAATTGTAAGTAGGTCT 7 3622422 0.992924074 3 5 69 0.888888889 0.903089987 0.222222222 0.142857143 0.333333333 7 1 0 8 2L:3622394-3622443 8 10 123 FBgn0000721 694.3333333 18.66333333 28.79666667 0.014402304 0.535809966 0.347262415 1 1 1 0.5 dme-miR-305-5p 8mer-m1 AGTACAAT 2L 3783588 3783595 + 2L_3783588_3783595_+ 0.47518534 0.493840613 0.484512976 0.013191289 bowl FBtr0307029|FBtr0077490|FBtr0307027|FBtr0077492|FBtr0077491|FBtr0077493|FBtr0307028 3783283|3783283|3783283|3783283|3783283|3783283|3783283 3784121|3784121|3784121|3784121|3784121|3784121|3784121 2L + 3783564 3783645 3'utr bowl FlyBase G1619.1 TAGATCTACAATTTAATACTTTTTAGTACAATGTCTAGGCAAGGCAATAGACCTAAACTAAGTAATAAAATCAGTTAAGCGA 121 3783586 0.989399388 13 111 1090 0.935714286 1.8162413 0.192857143 0.123966942 0.242857143 121 8 1 131 2L:3783564-3783645 8 bowl FBtr0077491|FBtr0077493|FBtr0307028|FBtr0307029|FBtr0077490|FBtr0307027|FBtr0077492 3783283|3783283|3783283|3783283|3783283|3783283|3783283 3784121|3784121|3784121|3784121|3784121|3784121|3784121 AGTACAAT 8mer-m1 dme-miR-305-5p 2L + 3783538 3783704 3'utr bowl FlyBase G1283.1 GACCCACAAGTACATTAAAATAAATTTAGATCTACAATTTAATACTTTTTAGTACAATGTCTAGGCAAGGCAATAGACCTAAACTAAGTAATAAAATCAGTTAAGCGATAATTGTAAGCGAAACAAACTCCGTTGTTGCATTTTATAGAGCTCTTATGCGTTAGGAT 171 3783586 0.834758409 17 161 1556 0.937743191 1.603865792 0.155642023 0.385964912 0.591439689 171 11 5 241 2L:3783538-3783704 8 92.5 124 FBgn0004893 346.31 11.79 17.92333333 0.26710173 7.845631891 5.160870374 2 2 2 0.5 dme-miR-7-5p 7mer-m8 GTCTTCC 2L 3784044 3784050 + 2L_3784044_3784050_+ 0.615318555 0.562969098 0.589143826 0.037016686 bowl FBtr0307029|FBtr0077490|FBtr0307027|FBtr0077492|FBtr0077491|FBtr0077493|FBtr0307028 3783283|3783283|3783283|3783283|3783283|3783283|3783283 3784121|3784121|3784121|3784121|3784121|3784121|3784121 2L + 3784018 3784101 3'utr bowl FlyBase G1620.1 ATATAAGCAACCCATAGAATTCCATGGTCTTCCTTCAATTTTAAATGATTTTATTCAAACCATAGCGAGTTAGTTGATTTCAAA 138 3784042 0.773076778 12 130 1064 0.947368421 1.364416975 0 0.195652174 0.350877193 138 3 6 162 2L:3784018-3784101 7 bowl FBtr0077491|FBtr0077493|FBtr0307028|FBtr0307029|FBtr0077490|FBtr0307027|FBtr0077492 3783283|3783283|3783283|3783283|3783283|3783283|3783283 3784121|3784121|3784121|3784121|3784121|3784121|3784121 GTCTTCC 7mer-m8 dme-miR-7-5p 2L + 3784016 3784103 3'utr bowl FlyBase G1286.1 TAATATAAGCAACCCATAGAATTCCATGGTCTTCCTTCAATTTTAAATGATTTTATTCAAACCATAGCGAGTTAGTTGATTTCAAATA 119 3784042 0.783192276 12 118 966 0.994444444 2.252853031 0.016666667 0.411764706 0.611111111 119 1 0 179 2L:3784016-3784103 7 119.5 125 FBgn0004893 346.31 11.79 17.92333333 0.345066559 10.13570823 6.667286591 2 2 2 0.5 dme-miR-980-3p 6mer3-8 GGCAGC 2L 4345435 4345440 + 2L_4345435_4345440_+ 0.508369756 0.659547782 0.583958769 0.106898989 Atet FBtr0112898|FBtr0112899 4344479|4344479 4345776|4345776 2L + 4345413 4345453 3'utr Atet FlyBase G1647.1 AACAGCACGCTCTCCTTCCTTCGGCAGCCACACCCAAAGTA 15 4345433 0.960407463 2 15 75 1 1.278753601 0.105263158 0.2 0.368421053 15 0 0 19 2L:4345413-4345453 6 Atet FBtr0112898|FBtr0112899 4344479|4344479 4345776|4345776 GGCAGC 6mer3-8 dme-miR-980-3p 2L + 4345416 4345453 3'utr Atet FlyBase G1306.1 AGCACGCTCTCCTTCCTTCGGCAGCCACACCCAAAGTA 7 4345433 0.904276849 2 6 31 0.833333333 1 0 0.571428571 0.75 7 2 0 10 2L:4345416-4345453 6 11 126 FBgn0020762 413.91 11.67333333 17.79666667 0.026575826 0.942318675 0.618093276 2 2 2 0.5 dme-miR-277-3p 6mer2-7 GCATTT 2L 4399866 4399871 + 2L_4399866_4399871_+ 0.965803181 0.561808059 0.76380562 0.285667675 l(2)k05819 FBtr0331447|FBtr0305968|FBtr0077432 4399732|4399732|4399732 4400487|4400105|4400105 2L + 4399852 4399882 3'utr l(2)k05819 FlyBase G1665.1 AGTTGTTTCTGTCAGCATTTGTTCTTAGGTG 5 4399871 0.717877533 4 5 50 1 0.698970004 0.2 0 0 5 0 0 5 2L:4399852-4399882 6 l(2)k05819 FBtr0305968|FBtr0331447|FBtr0077432 4399732|4399732|4399732 4400105|4400487|4400105 GCATTT 6mer2-7 dme-miR-277-3p 2L + 4399831 4399877 3'utr l(2)k05819 FlyBase G1323.1 AGTCTGGGTATCCTTAGACGAAGTTGTTTCTGTCAGCATTTGTTCTT 5 4399862 0.991013988 4 5 53 1 0.903089987 0.125 0.4 0.625 5 0 0 8 2L:4399831-4399877 6 4.5 127 FBgn0022153 937.2133333 22.65666667 34.38 0.004801468 0.198617037 0.130890052 -5 4 -0.5 0.5 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 447725 447732 + 2L_447725_447732_+ 0.35228981 0.4129868 0.382638305 0.04291926 ex FBtr0329832|FBtr0078059 447248|447248 448701|448701 2L + 447696 447761 3'utr ex FlyBase G791.1 AAATACACATTCAAATAATCAGAACCCAGTCTAGTCACTTAAGGGAATTGGTAACGTAACCACAGC 33 447734 0.657979396 9 31 162 0.906976744 0.892094603 0.046511628 0.181818182 0.372093023 33 0 4 39 2L:447696-447761 8 ex FBtr0329832|FBtr0078059 447248|447248 448701|448701 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L + 447691 447744 3'utr ex FlyBase G632.1 CCTCAAAATACACATTCAAATAATCAGAACCCAGTCTAGTCACTTAAGGGAATT 31 447725 0.959012801 6 29 140 0.95 1.278753601 0.025 0.258064516 0.425 31 1 1 38 2L:447691-447744 8 29 128 FBgn0004583 1742.906667 31.79333333 48.95666667 0.016638871 0.91214091 0.592360591 -9 0 -4.5 0.5 dme-miR-308-3p 7mer-m1 TGTGATT 2L 4478340 4478346 - 2L_4478340_4478346_- 0.401405833 0.422348567 0.4118772 0.014808796 dp FBtr0332354|FBtr0332350|FBtr0332348|FBtr0332349|FBtr0332352|FBtr0332345|FBtr0305142|FBtr0332351 4477460|4477460|4477460|4477460|4477460|4477460|4477460|4477460 4479537|4479537|4479537|4479537|4479537|4479537|4479537|4479537 2L - 4478307 4478383 3'utr dp FlyBase G7507.1 ATTTTTGTAGTTTTATAGTCAATTAATATTAAATTGTTGTGATTGTTTTTAATGCAAAAGAGATACTTCCACTAACT 30 4478340 0.992832346 8 29 344 0.973684211 1.568201724 0.184210526 0.2 0.368421053 30 1 0 37 2L:4478307-4478383 7 dp FBtr0332348|FBtr0332352|FBtr0305142|FBtr0332351|FBtr0332349|FBtr0332354|FBtr0332345|FBtr0332350 4477460|4477460|4477460|4477460|4477460|4477460|4477460|4477460 4479537|4479537|4479537|4479537|4479537|4479537|4479537|4479537 TGTGATT 7mer-m1 dme-miR-308-3p 2L - 4478320 4478375 3'utr dp FlyBase G5850.1 AGTTTTATAGTCAATTAATATTAAATTGTTGTGATTGTTTTTAATGCAAAAGAGAT 25 4478340 0.883336653 8 25 286 1 1.544068044 0.114285714 0.32 0.514285714 25 0 0 35 2L:4478320-4478375 7 23.5 129 FBgn0053196 31 0.07 0.11 0.758064516 335.7142857 213.6363636 -6 -6 -6 0.5 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 458977 458984 - 2L_458977_458984_- 0.506520746 0.361566258 0.434043502 0.102498239 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 2L - 458932 459036 3'utr CG4297 FlyBase G6576.1 ACATATATGTCTGTAACTCTATACTTTTAAATCGGAGGTTTTCACTGTACCTTAGCTTTAAGATTTGTGACTTTATCAATGTGAGTGTCTTTGAGCAAACAAAAC 32 458985 0.990795798 16 31 320 0.972972973 1.556302501 0.162162162 0.15625 0.27027027 32 1 0 36 2L:458932-459036 8 CG4297 FBtr0310034|FBtr0310035 458874|458874 460514|460514 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 458940 459008 3'utr CG4297 FlyBase G5137.1 AAATCGGAGGTTTTCACTGTACCTTAGCTTTAAGATTTGTGACTTTATCAATGTGAGTGTCTTTGAGCA 16 458985 0.950431636 8 13 145 0.857142857 1.255272505 0.142857143 0.3125 0.476190476 16 3 0 18 2L:458940-459008 8 17.5 130 FBgn0031258 226.3333333 3.93 5.996666667 0.077319588 4.452926209 2.918287938 1 1 1 0.5 dme-miR-308-3p 7mer-m1 TGTGATT 2L 4992149 4992155 + 2L_4992149_4992155_+ 0.451568264 0.426570769 0.439069516 0.017675902 CG34126 FBtr0329975|FBtr0329977|FBtr0329976|FBtr0329974|FBtr0290010 4991661|4991610|4991597|4991610|4991610 4992702|4992435|4992435|4992702|4992435 2L + 4992115 4992224 3'utr CG34126 FlyBase G1812.1 ACCAATTCCACTAAGATTGGATAGGACATATTGTTGTGATTCATGATCATATCAAAACTGAATTCTAGAAGCTCTATGCATTGCTGTTGTAATCGTGTGCTAACCAAATA 29 4992147 0.986850387 16 26 224 0.911764706 1.491361694 0.147058824 0.172413793 0.294117647 29 3 0 31 2L:4992115-4992224 7 CG34126 FBtr0329974|FBtr0329976|FBtr0329977|FBtr0329975|FBtr0290010 4991610|4991597|4991610|4991661|4991610 4992702|4992435|4992435|4992702|4992435 TGTGATT 7mer-m1 dme-miR-308-3p 2L + 4992111 4992230 3'utr CG34126 FlyBase G1425.1 TAAAACCAATTCCACTAAGATTGGATAGGACATATTGTTGTGATTCATGATCATATCAAAACTGAATTCTAGAAGCTCTATGCATTGCTGTTGTAATCGTGTGCTAACCAAATATTTGGC 36 4992148 0.775562654 19 33 286 0.862745098 1.342422681 0.176470588 0.333333333 0.529411765 36 6 1 44 2L:4992111-4992230 7 14 131 FBgn0083962 1546.97 31.44666667 48.27666667 0.009049949 0.445198219 0.289995167 2 1 1.5 0.5 dme-miR-79-3p 6mer2-7 AGCTTT 2L 4993806 4993811 - 2L_4993806_4993811_- 0.686087239 0.669462817 0.677775028 0.011755226 Rtnl1 FBtr0079039|FBtr0079043|FBtr0079040|FBtr0079038|FBtr0079044|FBtr0079042|FBtr0332413|FBtr0301539|FBtr0301540 4993639|4993639|4993639|4993639|4992806|4993639|4993639|4993639|4992806 4994207|4994207|4994207|4994207|4994207|4994207|4994207|4994207|4994207 2L - 4993773 4993820 3'utr Rtnl1 FlyBase G7654.1 GATTTATTCAGCTTTCTTAGTTTTCATGTGACCCTTTTTAAATTAATT 7 4993813 0.995863691 6 6 81 0.857142857 0.77815125 0.285714286 0 0 7 1 0 6 2L:4993773-4993820 6 Rtnl1 FBtr0301540|FBtr0301539|FBtr0332413|FBtr0079042|FBtr0079044|FBtr0079038|FBtr0079040|FBtr0079043|FBtr0079039 4992806|4993639|4993639|4993639|4992806|4993639|4993639|4993639|4993639 4994207|4994207|4994207|4994207|4994207|4994207|4994207|4994207|4994207 AGCTTT 6mer2-7 dme-miR-79-3p 2L - 4993773 4993822 3'utr Rtnl1 FlyBase G5948.1 TCGATTTATTCAGCTTTCTTAGTTTTCATGTGACCCTTTTTAAATTAATT 10 4993813 0.9938489 7 10 115 1 1.176091259 0.266666667 0.3 0.533333333 10 0 0 15 2L:4993773-4993822 6 6.5 132 FBgn0053113 2720.043333 137.31 210.0133333 0.002389668 0.04733814 0.030950416 2 2 2 0.5 dme-miR-277-3p 7mer-A1 GCATTTA 2L 5073486 5073492 - 2L_5073486_5073492_- 0.745241857 0.619939847 0.682590852 0.088601965 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 2L - 5073470 5073514 3'utr pgant5 FlyBase G7744.2 TCGACCAAGTACCAATAAATTGGCATTTAACTGACGTTTTGTGCT 38 5073494 0.766249955 6 36 262 0.934782609 1.633468456 0.152173913 0.210526316 0.347826087 38 3 0 43 2L:5073470-5073514 7 pgant5 FBtr0111024|FBtr0079026 5072168|5072168 5073882|5073882 GCATTTA 7mer-A1 dme-miR-277-3p 2L - 5073470 5073518 3'utr pgant5 FlyBase G6031.1 AGCTTCGACCAAGTACCAATAAATTGGCATTTAACTGACGTTTTGTGCT 30 5073494 0.809947269 4 29 212 1 1.653212514 0 0.266666667 0.511111111 30 0 0 45 2L:5073470-5073518 7 30 133 FBgn0031681 2245.746667 62.23 95.52 0.013358586 0.482082597 0.314070352 2 2 2 0.5 dme-bantam-3p 8mer-A1 TGATCTCA 2L 5206021 5206028 + 2L_5206021_5206028_+ 0.554911203 0.534094961 0.544503082 0.014719276 Msp300 FBtr0303388|FBtr0303385|FBtr0303387|FBtr0332405 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 2L + 5206011 5206052 3'utr Msp300 FlyBase G2011.1 TCGCAGGATATGATCTCAAGTTCCTGCTGCCAGCGATGGGCT 9 5206020 0.96282156 5 9 49 1 1.113943352 0.153846154 0.333333333 0.538461538 9 0 0 13 2L:5206011-5206052 8 Msp300 FBtr0332405|FBtr0303385|FBtr0303387|FBtr0303388 5205346|5205346|5205346|5205346 5207002|5207002|5207002|5207002 TGATCTCA 8mer-A1 dme-bantam-3p 2L + 5205999 5206056 3'utr Msp300 FlyBase G1589.1 CGTGGAACATTTTCGCAGGATATGATCTCAAGTTCCTGCTGCCAGCGATGGGCTAGAA 13 5206019 0.84509398 8 13 77 1 1.146128036 0.5 0.076923077 0.142857143 13 0 0 14 2L:5205999-5206056 8 10.5 134 FBgn0261836 15716.32333 95.7 146.9 0.000668095 0.109717868 0.071477195 1 2 1.5 0.5 dme-miR-92b-3p 6mer3-8 GTGCAA 2L 5219535 5219540 - 2L_5219535_5219540_- 0.790209642 0.970224955 0.880217298 0.12729011 tkv FBtr0079088|FBtr0079086|FBtr0079087|FBtr0079089 5218998|5218998|5218998|5218998 5220092|5220092|5220092|5220092 2L - 5219488 5219601 3'utr tkv FlyBase G7773.1 AGAACATGTCCTTATATGTTTTGTTTGTATCTAGTGTTTAAGTGTAAACTTTGCAGACTTTGTGCAAGTAAATGCTGCCTTTTGTAAAATCCACGGAATTAGTTGCCTTAAGAC 42 5219521 0.987873475 14 37 330 0.894736842 1.008600172 0.298245614 0.285714286 0.473684211 42 2 4 51 2L:5219488-5219601 6 tkv FBtr0079087|FBtr0079089|FBtr0079088|FBtr0079086 5218998|5218998|5218998|5218998 5220092|5220092|5220092|5220092 GTGCAA 6mer3-8 dme-miR-92b-3p 2L - 5219509 5219573 3'utr tkv FlyBase G6049.1 ATCTAGTGTTTAAGTGTAAACTTTGCAGACTTTGTGCAAGTAAATGCTGCCTTTTGTAAAATCCA 19 5219522 0.686550624 8 18 164 0.92 1.361727836 0.32 0.263157895 0.44 19 2 0 23 2L:5219509-5219573 6 24.5 135 FBgn0003716 310.6566667 12.88 19.87333333 0.0788652 1.902173913 1.232807783 -19 -18 -18.5 0.5 dme-miR-965-3p 7mer-m8 TACGCTT 2L 5219658 5219664 - 2L_5219658_5219664_- 0.566101327 0.610345917 0.588223622 0.031285657 tkv FBtr0079088|FBtr0079086|FBtr0079087|FBtr0079089 5218998|5218998|5218998|5218998 5220092|5220092|5220092|5220092 2L - 5219651 5219678 3'utr tkv FlyBase G7774.1 TGTGCCAGCTTTTGTACGCTTTAACTAA 11 5219665 0.663212313 5 10 91 0.909090909 1 0.272727273 0 0 11 1 0 10 2L:5219651-5219678 7 tkv FBtr0079087|FBtr0079089|FBtr0079088|FBtr0079086 5218998|5218998|5218998|5218998 5220092|5220092|5220092|5220092 TACGCTT 7mer-m8 dme-miR-965-3p 2L - 5219651 5219676 3'utr tkv FlyBase G6050.1 TGCCAGCTTTTGTACGCTTTAACTAA 5 5219664 0.629195756 4 5 37 1 0.903089987 0 0.6 0.75 5 0 0 8 2L:5219651-5219676 7 7.5 136 FBgn0003716 310.6566667 12.88 19.87333333 0.024142408 0.582298137 0.377390138 1 0 0.5 0.5 dme-bantam-3p 6mer2-7 GATCTC 2L 5310099 5310104 + 2L_5310099_5310104_+ 0.518973733 0.998641118 0.758807425 0.339176071 vri FBtr0079071|FBtr0342936|FBtr0079070|FBtr0346579|FBtr0300020 5309719|5309719|5309719|5309719|5309719 5310996|5310996|5310625|5311223|5310610 2L + 5310045 5310223 3'utr vri FlyBase G2053.1 ATGTTTATCTATCCACTGTATTGAGTCTTGTAATCGTGAATGTTTAACTATATAGATCTCGTCAACTCGGAGCTAAAAAAAAATCCTTAGGGTCAGCCCAAAAGAATTTCTAATTTAACCTGTTTGTTGTATACACACAAGCTATTTGTTTGCATAGCTAGCTGGTGACCTGCGATGAG 122 5310096 0.927326496 32 104 917 0.854304636 1.156347201 0.178807947 0.18852459 0.344370861 122 14 8 129 2L:5310045-5310223 6 vri FBtr0346579|FBtr0300020|FBtr0342936|FBtr0079070|FBtr0079071 5309719|5309719|5309719|5309719|5309719 5311223|5310610|5310996|5310625|5310996 GATCTC 6mer2-7 dme-bantam-3p 2L + 5310036 5310186 3'utr vri FlyBase G1632.1 TCTGTGTGTATGTTTATCTATCCACTGTATTGAGTCTTGTAATCGTGAATGTTTAACTATATAGATCTCGTCAACTCGGAGCTAAAAAAAAATCCTTAGGGTCAGCCCAAAAGAATTTCTAATTTAACCTGTTTGTTGTATACACACAAGC 73 5310106 0.987533168 21 68 605 0.946902655 2.029383778 0.061946903 0.369863014 0.592920354 73 6 0 107 2L:5310036-5310186 6 59.5 137 FBgn0016076 178.9966667 5.846666667 8.973333333 0.332408425 10.17673888 6.630757801 3 -7 -2 0.5 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2L 5316842 5316848 - 2L_5316842_5316848_- 0.666034268 0.691662709 0.678848489 0.018122015 Ncoa6 FBtr0329969|FBtr0307041|FBtr0307040 5315424|5315288|5316236 5317209|5317812|5317812 2L - 5316764 5316874 3'utr Ncoa6 FlyBase G7816.1 AAAATCCACCCATTGGAAATGATTTGCTAGTCATGTGAAACAGGCAATTTAATGTATAGCTCAGAAGATGAAATTTGAACAAATTAGTTGAGTAACGTATTTGAGAAGCTC 165 5316851 0.985201458 14 156 1263 0.936585366 1.806179974 0.224390244 0.206060606 0.36097561 165 11 2 192 2L:5316764-5316874 7 Ncoa6 FBtr0307040|FBtr0307041|FBtr0329969 5316236|5315288|5315424 5317812|5317812|5317209 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 5316829 5316886 3'utr Ncoa6 FlyBase G6078.2 TTACTCCCCAAAAAAATCCACCCATTGGAAATGATTTGCTAGTCATGTGAAACAGGCA 124 5316851 0.655334878 10 119 918 0.975247525 2.294466226 0.267326733 0.451612903 0.663366337 124 5 0 197 2L:5316829-5316886 7 134 138 FBgn0031698 1745.396667 21.13666667 32.68333333 0.076773379 6.339694055 4.099949006 3 3 3 0.5 dme-miR-980-5p 7mer-m1 AAAAACT 2L 5546538 5546544 + 2L_5546538_5546544_+ 0.531520318 0.637589295 0.584554807 0.075002109 Lam FBtr0307058|FBtr0079100|FBtr0307059|FBtr0346460 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 2L + 5546421 5546574 3'utr Lam FlyBase G2122.1 ACGAAAGAAAATGGAAGTACACGTAGCGGCTCAGCGATCCGTCGCATTTTTTATGGGTGGGCGTGGTCGCGTTTTACGCCGGCCAAACAAATGCAACGCCCACACAGACTATTATACAAAAACTGATGAATACAACTAAATTTTAAGTACATCT 68 5546547 0.999986213 15 61 384 0.904109589 1.819543936 0.04109589 0.073529412 0.136986301 68 7 0 66 2L:5546421-5546574 7 Lam FBtr0307059|FBtr0346460|FBtr0307058|FBtr0079100 5545507|5545507|5545507|5545507 5546642|5546642|5546642|5546642 AAAAACT 7mer-m1 dme-miR-980-5p 2L + 5546512 5546571 3'utr Lam FlyBase G1690.1 TGCAACGCCCACACAGACTATTATACAAAAACTGATGAATACAACTAAATTTTAAGTACA 45 5546547 0.970508596 8 42 243 0.938461538 1.484299839 0.015384615 0.377777778 0.569230769 45 3 1 61 2L:5546512-5546571 7 34.5 139 FBgn0002525 6943.616667 266.97 409.4166667 0.004968592 0.129228003 0.084266232 -9 -9 -9 0.5 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 5800817 5800824 - 2L_5800817_5800824_- 0.606275827 0.576508609 0.591392218 0.021048589 CG14005 FBtr0079160 5800515 5800869 2L - 5800700 5800859 coding-3'utr CG14005 FlyBase G7919.1 TAGCACCACGTGGTAAGGACATTGTATGACAGCTTTAGCTTTAAGTTGGGAATAGAGTCGCGGCGCTCGACCCTGTGTATGTTTTTCAATTCGTTCCTTTCTCAGACACAGATGTCTAATTCACTCGACGTACAAAGCAGCAGCATAGCGAACCGAAGAT 105 5800825 0.999996235 14 100 964 0.96124031 1.792391689 0.186046512 0.19047619 0.341085271 105 4 1 124 2L:5800700-5800859 8 CG14005 FBtr0079160 5800515 5800869 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 5800788 5800870 stop_codon CG14005 FlyBase G6159.1 ATCCCGACTACTAGCACCACGTGGTAAGGACATTGTATGACAGCTTTAGCTTTAAGTTGGGAATAGAGTCGCGGCGCTCGACC 55 5800825 0.989660082 6 52 502 0.957746479 1.832508913 0.183098592 0.2 0.38028169 55 3 0 68 2L:5800788-5800870 8 67 140 FBgn0031739 237 20.57 31.17666667 0.282700422 3.257170637 2.149043088 1 1 1 0.5 dme-miR-317-3p 7mer-m8 TGTGTTC 2L 5990208 5990214 - 2L_5990208_5990214_- 0.524221186 0.501220486 0.512720836 0.016263951 lid FBtr0307071|FBtr0345336 5989461|5989398 5990641|5990641 2L - 5990139 5990277 3'utr lid FlyBase G7940.1 AATTTTATAATATATTTTACCATTACCTGCTATTCTTAGTTTTTGTTAATTTAATTCACTTTTTGTGTTCGCCTCTCGAGTTTTGGTTCAGTGCGCACGCAAAGTTTTCTTACGTTTTATTTGACTTTTTCCTTTAATC 197 5990215 0.946594863 15 190 2416 0.969957082 1.655138435 0.060085837 0.137055838 0.270386266 197 3 4 226 2L:5990139-5990277 7 lid FBtr0307071|FBtr0345336 5989461|5989398 5990641|5990641 TGTGTTC 7mer-m8 dme-miR-317-3p 2L - 5990196 5990271 3'utr lid FlyBase G6180.1 ATAATATATTTTACCATTACCTGCTATTCTTAGTTTTTGTTAATTTAATTCACTTTTTGTGTTCGCCTCTCGAGTT 119 5990215 0.827908948 7 111 1396 0.943396226 1.574031268 0.006289308 0.277310924 0.459119497 119 6 3 150 2L:5990196-5990271 7 72 141 FBgn0031759 1960.226667 33.73333333 51.87 0.036730446 2.134387352 1.388085599 1 1 1 0.5 dme-miR-1008-3p 8mer-A1 AGCTGTGA 2L 6002422 6002429 + 2L_6002422_6002429_+ 0.282816407 0.386919293 0.33486785 0.073611867 Tsp26A FBtr0307300|FBtr0332600|FBtr0113024 6001736|6001736|6001736 6003738|6003738|6003738 2L + 6002409 6002448 3'utr Tsp26A FlyBase G2221.1 TATCTTGAAATGCAGCTGTGATATATTTTTAAAGAAAAGT 57 6002434 0.705512977 10 46 493 0.825 1.51851394 0.1125 0.263157895 0.475 57 13 1 66 2L:6002409-6002448 8 Tsp26A FBtr0332600|FBtr0113024|FBtr0307300 6001736|6001736|6001736 6003738|6003738|6003738 AGCTGTGA 8mer-A1 dme-miR-1008-3p 2L + 6002408 6002452 3'utr Tsp26A FlyBase G1771.1 TTATCTTGAAATGCAGCTGTGATATATTTTTAAAGAAAAGTATAG 52 6002435 0.961990547 11 47 484 0.9375 1.875061263 0.125 0.403846154 0.6125 52 5 0 75 2L:6002408-6002452 8 54.5 142 FBgn0031760 374.3466667 15.47666667 23.65666667 0.145586978 3.52143011 2.303790334 -12 -13 -12.5 0.5 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 2L 6002839 6002844 + 2L_6002839_6002844_+ 0.831696056 0.859132584 0.84541432 0.019400535 Tsp26A FBtr0307300|FBtr0332600|FBtr0113024 6001736|6001736|6001736 6003738|6003738|6003738 2L + 6002817 6002860 3'utr Tsp26A FlyBase G2225.1 AGGAAAACATTGATTCGCTCTTGTACCTTTTTAAATCTATATTG 39 6002838 0.710189588 6 39 430 1 1.662757832 0.043478261 0.179487179 0.304347826 39 0 0 46 2L:6002817-6002860 6 Tsp26A FBtr0332600|FBtr0113024|FBtr0307300 6001736|6001736|6001736 6003738|6003738|6003738 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 2L + 6002825 6002861 3'utr Tsp26A FlyBase G1773.1 ATTGATTCGCTCTTGTACCTTTTTAAATCTATATTGC 26 6002838 0.72004263 5 26 302 1 1.544068044 0 0.307692308 0.485714286 26 0 0 35 2L:6002825-6002861 6 32.5 143 FBgn0031760 374.3466667 15.47666667 23.65666667 0.086817923 2.099935387 1.373819924 1 1 1 0.5 dme-miR-277-3p 7mer-A1 GCATTTA 2L 6041268 6041274 - 2L_6041268_6041274_- 0.758511209 0.778281765 0.768396487 0.013979925 ade2 FBtr0079219|FBtr0079220|FBtr0079221 6041179|6041179|6041179 6041313|6041313|6041313 2L - 6041228 6041289 3'utr ade2 FlyBase G7995.1 TTAAATAGGTTCTTGGCATTTATGACCTGATATATCTAAATACTATATACACGAATTTGTTT 63 6041270 0.987501565 14 59 593 0.929411765 1.897627091 0.258823529 0.238095238 0.435294118 63 6 0 79 2L:6041228-6041289 7 ade2 FBtr0079219|FBtr0079220|FBtr0079221 6041179|6041179|6041179 6041313|6041313|6041313 GCATTTA 7mer-A1 dme-miR-277-3p 2L - 6041248 6041289 3'utr ade2 FlyBase G6217.1 TTAAATAGGTTCTTGGCATTTATGACCTGATATATCTAAATA 30 6041269 0.652043457 8 30 277 1 1.716003344 0.173076923 0.6 0.769230769 30 0 0 52 2L:6041248-6041289 7 45 144 FBgn0000052 854.3333333 23.79 36.27666667 0.052672649 1.891551072 1.240466783 -4 -5 -4.5 0.5 dme-miR-305-5p 7mer-m8 AGTACAA 2L 6046966 6046972 - 2L_6046966_6046972_- 0.413136316 0.477300519 0.445218418 0.045370941 slmo FBtr0343130|FBtr0079218|FBtr0299810|FBtr0079217|FBtr0112945 6046514|6046652|6046649|6046652|6046649 6047052|6047052|6047052|6047052|6047052 2L - 6046929 6047034 3'utr slmo FlyBase G8017.1 TGCAAGGTCGCGCGGGGGCTGTTCACTAGTGAATTATTTAGATGGCGCGCGGTCGTCGTTTTAGTACAACTAATTAATCGATGGCACGATGGACATGGACAGCAAC 82 6046974 0.942682906 14 80 621 0.978947368 1.667452953 0.336842105 0.146341463 0.263157895 82 1 1 93 2L:6046929-6047034 7 slmo FBtr0112945|FBtr0343130|FBtr0079218|FBtr0299810|FBtr0079217 6046649|6046514|6046652|6046649|6046652 6047052|6047052|6047052|6047052|6047052 AGTACAA 7mer-m8 dme-miR-305-5p 2L - 6046929 6047030 3'utr slmo FlyBase G6235.1 AGGTCGCGCGGGGGCTGTTCACTAGTGAATTATTTAGATGGCGCGCGGTCGTCGTTTTAGTACAACTAATTAATCGATGGCACGATGGACATGGACAGCAAC 56 6046974 0.882109073 11 54 384 0.948051948 1.164352856 0.376623377 0.267857143 0.467532468 56 0 4 73 2L:6046929-6047030 7 40.5 145 FBgn0029161 669.6266667 62.72666667 95.86333333 0.060481462 0.645658412 0.422476442 2 2 2 0.5 dme-miR-14-3p 7mer-m8 AAGACTG 2L 6095586 6095592 + 2L_6095586_6095592_+ 0.659492442 0.623059084 0.641275763 0.025762233 Kr-h1 FBtr0344438|FBtr0344437 6095555|6095555 6096498|6096498 2L + 6095552 6095743 stop_codon Kr-h1 FlyBase G2287.1 CCTAGGGGTCCAAGGCCGATCCCCAATCAGCATTAAGACTGTCCAAACAAATTCTAACTGAAATTAGCCTAAGTTTTTTCTCTGAGGTTCGGGGTTAGGCCTGGAAAAAGAAAGCATAGAAACGTATGGATATGGCAGTGAGATAGTTTTCCAGCAGCGAAAATGAAAATGCCAAAAGTATTAAAAAAGGGA 168 6095583 0.941213682 18 157 850 0.928205128 1.78055732 0.087179487 0.160714286 0.276923077 168 12 2 181 2L:6095552-6095743 7 Kr-h1 FBtr0344437|FBtr0344438 6095555|6095555 6096498|6096498 AAGACTG 7mer-m8 dme-miR-14-3p 2L + 6095544 6095661 stop_codon Kr-h1 FlyBase G1818.1 CAAGGCCTCCTAGGGGTCCAAGGCCGATCCCCAATCAGCATTAAGACTGTCCAAACAAATTCTAACTGAAATTAGCCTAAGTTTTTTCTCTGAGGTTCGGGGTTAGGCCTGGAAAAAG 106 6095584 0.999444007 16 101 522 0.953020134 1.851258349 0.053691275 0.320754717 0.516778523 106 6 1 142 2L:6095544-6095661 7 97 146 FBgn0266450 461.9366667 12.49333333 19.07 0.209985496 7.764140875 5.086523335 3 2 2.5 0.5 dme-miR-2b-2-5p 7mer-m8 TTGAAGA 2L 6331355 6331361 + 2L_6331355_6331361_+ 0.473289513 0.54089962 0.507094566 0.04780756 PDZ-GEF FBtr0333242|FBtr0300039|FBtr0079249|FBtr0300038 6330837|6330837|6330642|6330837 6332789|6331750|6331750|6331750 2L + 6331184 6331398 3'utr PDZ-GEF FlyBase G2336.1 TAGTAACTGAGAATTTAATTTTAGTTAGGGCTTACCATTTATTATTTAATTTAGCTAAATTCTTTGTACACACTTTCTACCCATCATTCACCGCCAGCGTAGAAGTTGCCTTTTCTCTTAAAAGAAAACGTCTGCAGGCAGACCCTCTCAGCAGACCCAACTAAAACTCTTTTGAAGACTTTTCGTCGGCATTTACAAGTGTAAGAACAGAACAA 43 6331365 0.98260541 21 42 319 0.963636364 1.72427587 0.2 0.23255814 0.4 43 2 0 53 2L:6331184-6331398 7 PDZ-GEF FBtr0300038|FBtr0079249|FBtr0300039|FBtr0333242 6330837|6330642|6330837|6330837 6331750|6331750|6331750|6332789 TTGAAGA 7mer-m8 dme-miR-2b-2-5p 2L + 6331310 6331377 3'utr PDZ-GEF FlyBase G1856.1 AACGTCTGCAGGCAGACCCTCTCAGCAGACCCAACTAAAACTCTTTTGAAGACTTTTCGTCGGCATTT 10 6331330 0.840109877 7 9 59 0.888888889 1.204119983 0 0.6 0.777777778 10 2 0 16 2L:6331310-6331377 7 12.5 147 FBgn0265778 1055.34 20.3 30.87333333 0.011844524 0.615763547 0.404880155 -10 25 7.5 0.5 dme-miR-252-5p 6mer3-8 GTACTT 2L 6332132 6332137 + 2L_6332132_6332137_+ 0.587134912 0.736773178 0.661954045 0.105810257 PDZ-GEF FBtr0333242 6330837 6332789 2L + 6332079 6332185 3'utr PDZ-GEF FlyBase G2343.1 AAATCAAATCAAACGATATTGGATATGCTATATATGTATACATTGTGCTCTTTGTACTTTTAAGTTAGACTAAATACCAAATTTGCTTTTTAAGGCTTAAGAAAAAC 82 6332161 0.991359336 19 77 828 0.949494949 1.672097858 0.262626263 0.170731707 0.313131313 82 4 1 94 2L:6332079-6332185 6 PDZ-GEF FBtr0333242 6330837 6332789 GTACTT 6mer3-8 dme-miR-252-5p 2L + 6332056 6332201 3'utr PDZ-GEF FlyBase G1861.1 GCTGAATTCGAGAAAACAAAAACAAATCAAATCAAACGATATTGGATATGCTATATATGTATACATTGTGCTCTTTGTACTTTTAAGTTAGACTAAATACCAAATTTGCTTTTTAAGGCTTAAGAAAAACATTAGATCGAAGCCTA 58 6332121 0.990771662 22 55 562 0.975609756 1.903089987 0.158536585 0.310344828 0.512195122 58 2 0 80 2L:6332056-6332201 6 38 148 FBgn0265778 1055.34 20.3 30.87333333 0.036007353 1.871921182 1.230835673 -29 11 -9 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-m8 CTGTGAT 2L 6426260 6426266 + 2L_6426260_6426266_+ 0.641293041 0.638556489 0.639924765 0.001934998 Fic FBtr0079257|FBtr0079257|FBtr0079257 6426121|6426121|6426121 6426371|6426371|6426371 2L + 6426243 6426308 3'utr Fic FlyBase G2392.1 AAAATAACGATGTAATTCTGTGATCATATTTAAGCTAAAAGACAACCAAAAAATGTACATAATGCA 237 6426259 0.854317163 13 218 1974 0.93220339 1.962211439 0.06440678 0.219409283 0.372881356 237 18 2 275 2L:6426243-6426308 7 Fic FBtr0079257|FBtr0079257|FBtr0079257 6426121|6426121|6426121 6426371|6426371|6426371 CTGTGAT 7mer-m8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 6426241 6426318 3'utr Fic FlyBase G1893.1 GAAAAATAACGATGTAATTCTGTGATCATATTTAAGCTAAAAGACAACCAAAAAATGTACATAATGCACAATCCAACT 151 6426258 0.933418858 14 139 1229 0.922018349 1.604226053 0.050458716 0.298013245 0.513761468 151 13 4 201 2L:6426241-6426318 7 174.5 149 FBgn0263278 143.1166667 8.97 13.60333333 1.219284966 19.45373467 12.8277383 1 2 1.5 0.5 dme-miR-283-5p 8mer-A1 TGATATTA 2L 6448480 6448487 - 2L_6448480_6448487_- 0.465990477 0.373485881 0.419738179 0.06541063 retm FBtr0339788 6448462 6449851 2L - 6448467 6448513 3'utr retm FlyBase G8125.1 AAACATTTTGTGAAAACATTGAATTGTGATATTAAAGAAAATTAAAC 46 6448490 0.69888334 6 44 372 0.963636364 1.423245874 0.272727273 0.152173913 0.290909091 46 1 1 53 2L:6448467-6448513 8 retm FBtr0339788 6448462 6449851 TGATATTA 8mer-A1 dme-miR-283-5p 2L - 6448467 6448509 3'utr retm FlyBase G6317.1 ATTTTGTGAAAACATTGAATTGTGATATTAAAGAAAATTAAAC 24 6448491 0.716369219 5 22 187 0.921052632 1.544068044 0.526315789 0.416666667 0.631578947 24 3 0 35 2L:6448467-6448509 8 34 150 FBgn0031814 365.7 13.12 20.05 0.092972382 2.591463415 1.695760599 3 4 3.5 0.5 dme-miR-999-3p 6mer3-8 AGTTAA 2L 6474464 6474469 - 2L_6474464_6474469_- 0.868551085 0.997972089 0.933261587 0.091514467 CG9536 FBtr0303229|FBtr0079267 6474436|6474436 6474798|6474798 2L - 6474453 6474494 3'utr CG9536 FlyBase G8161.1 TGTAATTGAAAATGATGCTTTATTTAGTTAATAACTGTAAAT 44 6474474 0.688109184 9 39 472 0.901960784 1.361727836 0.137254902 0.159090909 0.274509804 44 4 1 46 2L:6474453-6474494 6 CG9536 FBtr0303229|FBtr0079267 6474436|6474436 6474798|6474798 AGTTAA 6mer3-8 dme-miR-999-3p 2L - 6474455 6474539 3'utr CG9536 FlyBase G6340.1 CTAGAGCCCTTACATAGATGCATACTTTCTGTTGTAGTCCTTACATGTAATTGAAAATGATGCTTTATTTAGTTAATAACTGTAA 45 6474472 0.807463949 17 36 465 0.788732394 0.84509804 0.267605634 0.422222222 0.633802817 45 8 7 56 2L:6474455-6474539 6 33 151 FBgn0031818 366.33 22.85 34.65666667 0.090082712 1.444201313 0.952197749 5 3 4 0.5 dme-miR-1007-3p 8mer-A1 TGAGCTTA 2L 6496457 6496464 + 2L_6496457_6496464_+ 0.510621768 0.545584814 0.528103291 0.024722574 CG31638 FBtr0079262|FBtr0113411 6496064|6496119 6496988|6496988 2L + 6496441 6496492 3'utr CG31638 FlyBase G2447.1 GCTGGCCATATTCTTATGAGCTTAACCCGCAGCTAAGACGGTTGTTAGGAGG 15 6496451 0.779152902 4 14 102 0.9375 1.176091259 0.3125 0.066666667 0.125 15 1 0 15 2L:6496441-6496492 8 CG31638 FBtr0113411|FBtr0079262 6496119|6496064 6496988|6496988 TGAGCTTA 8mer-A1 dme-miR-1007-3p 2L + 6496441 6496472 3'utr CG31638 FlyBase G1929.1 GCTGGCCATATTCTTATGAGCTTAACCCGCAG 7 6496451 0.724868643 2 7 46 1 0.954242509 0.555555556 0.285714286 0.444444444 7 0 0 9 2L:6496441-6496472 8 9.5 152 FBgn0051638 490.34 20.43333333 31.29333333 0.019374312 0.464926591 0.303579037 6 6 6 0.5 dme-miR-1008-3p 8mer-A1 AGCTGTGA 2L 6564580 6564587 - 2L_6564580_6564587_- 0.431280971 0.367722181 0.399501576 0.044942858 CG13766 FBtr0343161|FBtr0079330 6564110|6564361 6565169|6565169 2L - 6564544 6564608 3'utr CG13766 FlyBase G8188.1 TTATTTCATTCAATCGGATGAAGCTGTGATAAAACGAACCAAATATTCCATTGACTTGTTAGACC 21 6564590 0.77547647 8 19 137 0.916666667 1.041392685 0.083333333 0.095238095 0.208333333 21 1 1 22 2L:6564544-6564608 8 CG13766 FBtr0079330|FBtr0343161 6564361|6564110 6565169|6565169 AGCTGTGA 8mer-A1 dme-miR-1008-3p 2L - 6564540 6564609 3'utr CG13766 FlyBase G6370.1 GTTATTTCATTCAATCGGATGAAGCTGTGATAAAACGAACCAAATATTCCATTGACTTGTTAGACCCCCT 24 6564590 0.862002143 7 17 119 0.625 0.920818754 0.3 0.458333333 0.675 24 13 2 25 2L:6564540-6564609 8 15.5 153 FBgn0031834 61.51666667 4.113333333 6.276666667 0.251964237 3.768233387 2.469463622 3 3 3 0.5 dme-miR-317-3p 8mer-A1 TGTGTTCA 2L 6661963 6661970 + 2L_6661963_6661970_+ 0.569250457 0.522982889 0.546116673 0.032716134 CG11070 FBtr0079297 6661698 6662033 2L + 6661921 6661994 3'utr CG11070 FlyBase G2512.1 AATAACATGCAAAGGATAAATTATTGTAGTCATATTTGGTTTTGTGTTCACAATATGTTTACATATATGTTTAA 29 6661962 0.992589672 8 28 324 0.970588235 1.217483944 0.058823529 0.137931034 0.264705882 29 0 1 33 2L:6661921-6661994 8 CG11070 FBtr0079297 6661698 6662033 TGTGTTCA 8mer-A1 dme-miR-317-3p 2L + 6661921 6661994 3'utr CG11070 FlyBase G1988.1 AATAACATGCAAAGGATAAATTATTGTAGTCATATTTGGTTTTGTGTTCACAATATGTTTACATATATGTTTAA 21 6661962 0.957462311 4 20 220 0.944444444 1.531478917 0.111111111 0.571428571 0.75 21 2 0 34 2L:6661921-6661994 8 21 154 FBgn0028467 522.98 18.67666667 28.61666667 0.040154499 1.124397644 0.73383809 1 1 1 0.5 dme-miR-305-5p 7mer-A1 GTACAAA 2L 6778857 6778863 - 2L_6778857_6778863_- 0.425714034 0.44295591 0.434334972 0.012191864 nrv1 FBtr0332370|FBtr0079384 6778822|6778553 6779372|6779372 2L - 6778837 6778966 3'utr nrv1 FlyBase G8267.1 GATCATTATTTTCTGTCAGTTGTATTTAGTTTTAATTTATAAATGTTGAAACATGCCCGAAAAATTCTTTGTTTCCCGCACATCGCCTAGGCTTGTTCAATTTGTACAAAGAAGCAACTAAATAAATTAT 76 6778865 0.994659181 15 75 482 0.989583333 1.977723605 0.354166667 0.210526316 0.375 76 1 0 95 2L:6778837-6778966 7 nrv1 FBtr0332370|FBtr0079384 6778822|6778553 6779372|6779372 GTACAAA 7mer-A1 dme-miR-305-5p 2L - 6778844 6778927 3'utr nrv1 FlyBase G6433.1 TAAATGTTGAAACATGCCCGAAAAATTCTTTGTTTCCCGCACATCGCCTAGGCTTGTTCAATTTGTACAAAGAAGCAACTAAAT 59 6778865 0.987244447 7 58 353 0.9875 1.897627091 0.1875 0.271186441 0.4625 59 1 0 79 2L:6778844-6778927 7 34.5 155 FBgn0015776 3384.113333 195.7933333 300.12 0.010194694 0.176206204 0.114954018 2 2 2 0.5 dme-miR-8-3p 6mer2-7 AGTATT 2L 6911429 6911434 - 2L_6911429_6911434_- 0.733618891 0.552809245 0.643214068 0.127851765 Wee1 FBtr0332329|FBtr0079371 6911088|6911341 6911700|6911700 2L - 6911390 6911465 3'utr Wee1 FlyBase G8291.1 TAAACTTTAAGATTCTCGCATAGTTGTAATGAGTATTGTTTTCGAAATTAAAATATTTATTATGTTACATGGAAAT 11 6911432 0.986513279 8 11 96 1 1.176091259 0.133333333 0.272727273 0.466666667 11 0 0 15 2L:6911390-6911465 6 Wee1 FBtr0332329|FBtr0079371 6911088|6911341 6911700|6911700 AGTATT 6mer2-7 dme-miR-8-3p 2L - 6911413 6911448 3'utr Wee1 FlyBase G6455.1 GCATAGTTGTAATGAGTATTGTTTTCGAAATTAAAA 7 6911429 0.951315344 4 6 62 1 1 0.2 0.428571429 0.6 7 0 0 10 2L:6911413-6911448 6 6 156 FBgn0011737 492.04 24.44666667 37.58666667 0.012194131 0.245432233 0.159631075 -2 -5 -3.5 0.5 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 6914654 6914661 - 2L_6914654_6914661_- 0.461597794 0.495673751 0.478635772 0.024095371 x16 FBtr0079368|FBtr0332328 6914379|6914299 6915042|6915042 2L - 6914548 6914677 3'utr x16 FlyBase G8311.1 AGCCGCAGATTAACGATCTAGTCAGGATTGCTATGTAAATTGATTTGCCTTGGATTTTATTTTGCTTACCCTGGAATTATACTCGAATGTGCAGAGGACGAAGCATCGCCACCATTTTCATGTCAATTTT 31 6914661 0.934813068 10 29 222 0.941176471 1.204119983 0.205882353 0.096774194 0.176470588 31 1 1 32 2L:6914548-6914677 8 x16 FBtr0079368|FBtr0332328 6914379|6914299 6915042|6915042 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 6914622 6914703 3'utr x16 FlyBase G6467.1 AATTTAAGATATAGAAATGTATCGGCAGCCGCAGATTAACGATCTAGTCAGGATTGCTATGTAAATTGATTTGCCTTGGATT 28 6914667 0.972373818 9 27 162 0.977272727 1.633468456 0.318181818 0.464285714 0.659090909 28 1 0 43 2L:6914622-6914703 8 21 157 FBgn0028554 1073.163333 75.76666667 116.1166667 0.019568317 0.27716674 0.180852591 0 6 3 0.5 dme-miR-305-5p 7mer-m8 AGTACAA 2L 6966868 6966874 - 2L_6966868_6966874_- 0.497603271 0.470305285 0.483954278 0.019302601 smt3 FBtr0079356|FBtr0346716 6966778|6966778 6967027|6967027 2L - 6966844 6966944 3'utr smt3 FlyBase G8372.2 CAAAAACACAACAACAACAACATGAAGAATCCAACAAACCAGGCCCTAAGAATCGATTGAATATGCTTTTAGTACAACTGTAGATTCTAAATGCGTCTGTG 79 6966876 0.987768481 17 75 701 0.955555556 1.633468456 0.177777778 0.139240506 0.244444444 79 3 1 86 2L:6966844-6966944 7 smt3 FBtr0079356|FBtr0346716 6966778|6966778 6967027|6967027 AGTACAA 7mer-m8 dme-miR-305-5p 2L - 6966850 6966944 3'utr smt3 FlyBase G6514.2 CAAAAACACAACAACAACAACATGAAGAATCCAACAAACCAGGCCCTAAGAATCGATTGAATATGCTTTTAGTACAACTGTAGATTCTAAATGCG 50 6966876 0.984249376 13 47 386 0.948051948 1.86332286 0.337662338 0.34 0.571428571 50 4 0 73 2L:6966850-6966944 7 55 158 FBgn0264922 12150.86667 2306.473333 3557.52 0.004526426 0.023845929 0.015460208 2 2 2 0.5 dme-miR-980-3p 7mer-A1 GCAGCTA 2L 7031105 7031111 - 2L_7031105_7031111_- 0.495791012 0.590872209 0.543331611 0.067232561 Rab30 FBtr0079428|FBtr0079426|FBtr0079427 7030491|7030491|7030491 7031433|7031433|7031433 2L - 7031079 7031152 3'utr Rab30 FlyBase G8408.2 AAACATTTAAAGTACAATGTGCAAACGGATCTGGAAACTGTGCAGCTAATCTGTTATCTGTTATCGTGATATTC 73 7031114 0.86851819 15 57 442 0.846153846 1.40936947 0.230769231 0.164383562 0.32967033 73 12 2 77 2L:7031079-7031152 7 Rab30 FBtr0079427|FBtr0079426|FBtr0079428 7030491|7030491|7030491 7031433|7031433|7031433 GCAGCTA 7mer-A1 dme-miR-980-3p 2L - 7031083 7031201 3'utr Rab30 FlyBase G6536.2 AAGGTATTTAGAGCAATTCTCTTCGCTTTCACTAAACTACGATAACAACAAACATTTAAAGTACAATGTGCAAACGGATCTGGAAACTGTGCAGCTAATCTGTTATCTGTTATCGTGAT 68 7031114 0.85457327 18 59 422 0.909090909 1.653212514 0.151515152 0.323529412 0.535353535 68 8 1 90 2L:7031083-7031201 7 40.5 159 FBgn0031882 194.3333333 12.53666667 18.90666667 0.208404803 3.230523797 2.142101551 3 3 3 0.5 dme-miR-11-3p 7mer-m1 TGTGATG 2L 7054713 7054719 + 2L_7054713_7054719_+ 0.60384363 0.584451867 0.594147748 0.013712003 milt FBtr0306230|FBtr0306228|FBtr0306231|FBtr0306232|FBtr0306233|FBtr0306229 7054555|7054555|7054555|7054555|7054555|7054555 7054847|7054847|7056010|7054847|7056010|7056010 2L + 7054673 7054729 5'utr milt FlyBase G2717.1 TACGCGAGAACAAGTTGAATAACGAAACGTAATGTAATCGTGTGATGAACGTTTAGT 14 7054688 0.968250832 9 13 69 0.933333333 1.146128036 0.2 0.071428571 0.133333333 14 1 0 14 2L:7054673-7054729 7 milt FBtr0306233|FBtr0306229|FBtr0306230|FBtr0306228|FBtr0306231|FBtr0306232 7054555|7054555|7054555|7054555|7054555|7054555 7056010|7056010|7054847|7054847|7056010|7054847 TGTGATG 7mer-m1 dme-miR-11-3p 2L + 7054668 7054738 5'utr milt FlyBase G2144.1 AGCACTACGCGAGAACAAGTTGAATAACGAAACGTAATGTAATCGTGTGATGAACGTTTAGTTTAATTTTT 14 7054688 0.967299234 9 14 77 1 1.431363764 0.333333333 0.5 0.740740741 14 0 0 27 2L:7054668-7054738 7 8.5 160 FBgn0262872 1801.88 44.2 67.81666667 0.004717295 0.192307692 0.125337921 25 25 25 0.5 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2L 7055393 7055399 + 2L_7055393_7055399_+ 0.570871518 0.604670192 0.587770855 0.02389929 milt FBtr0306231|FBtr0306233|FBtr0306229 7054555|7054555|7054555 7056010|7056010|7056010 2L + 7055363 7055433 3'utr milt FlyBase G2724.1 ACATAAATTATAGCGAAAAACGATTATTTTTCTAGTCCTACACTGGGTGGGTGCTCGTTTGGCTATGCAGA 73 7055392 0.848475309 11 70 658 0.964285714 1.908485019 0.095238095 0.095890411 0.214285714 73 3 0 81 2L:7055363-7055433 7 milt FBtr0306233|FBtr0306229|FBtr0306231 7054555|7054555|7054555 7056010|7056010|7056010 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2L + 7055372 7055428 3'utr milt FlyBase G2149.1 ATAGCGAAAAACGATTATTTTTCTAGTCCTACACTGGGTGGGTGCTCGTTTGGCTAT 38 7055392 0.609120628 6 37 350 0.962264151 1.707570176 0.056603774 0.342105263 0.528301887 38 2 0 51 2L:7055372-7055428 7 49.5 161 FBgn0262872 1801.88 44.2 67.81666667 0.027471308 1.119909502 0.729909069 1 1 1 0.5 dme-miR-317-3p 6mer3-8 TGTGTT 2L 7062286 7062291 + 2L_7062286_7062291_+ 0.911986618 0.55841712 0.735201869 0.250011391 Mnn1 FBtr0079401|FBtr0110978 7061720|7061720 7062665|7063586 2L + 7062227 7062303 3'utr Mnn1 FlyBase G2734.1 ATTTATGATGTATTTTTAGCTGTTATACTTTATCCCCTATGTATTTATTGCTACAACTATGTGTTTTCCCCTCAAGC 16 7062287 0.987224303 7 16 142 1 1.278753601 0.157894737 0.125 0.263157895 16 0 0 19 2L:7062227-7062303 6 Mnn1 FBtr0079401|FBtr0110978 7061720|7061720 7062665|7063586 TGTGTT 6mer3-8 dme-miR-317-3p 2L + 7062259 7062300 3'utr Mnn1 FlyBase G2158.1 TCCCCTATGTATTTATTGCTACAACTATGTGTTTTCCCCTCA 8 7062292 0.982090946 4 8 60 1 1.176091259 0 0.5 0.733333333 8 0 0 15 2L:7062259-7062300 6 10 162 FBgn0031885 716.3333333 17.91333333 27.53333333 0.013959981 0.558243394 0.363196126 -1 -6 -3.5 0.5 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2L 7099159 7099166 - 2L_7099159_7099166_- 0.612448855 0.611734716 0.612091785 0.000505016 Pvf3 FBtr0112612|FBtr0342658 7098186|7098186 7100092|7100092 2L - 7099152 7099189 3'utr Pvf3 FlyBase G8436.1 AAATTAAATTTTCATATTTAATTTCTAGTCAAATTTTC 68 7099167 0.743921356 4 67 723 0.988372093 1.929418926 0 0.235294118 0.395348837 68 1 0 85 2L:7099152-7099189 8 Pvf3 FBtr0112612|FBtr0342658 7098186|7098186 7100092|7100092 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2L - 7099151 7099178 3'utr Pvf3 FlyBase G6556.1 TCATATTTAATTTCTAGTCAAATTTTCA 32 7099167 0.738120811 2 32 330 1 1.544068044 0 0.09375 0.171428571 32 0 0 35 2L:7099151-7099178 8 49.5 163 FBgn0085407 30.66666667 0.876666667 1.326666667 1.614130435 56.46387833 37.31155779 1 1 1 0.5 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 7185351 7185358 + 2L_7185351_7185358_+ 0.412440776 0.476299221 0.444369999 0.045154708 CG4495 FBtr0079405|FBtr0113028 7185291|7185291 7185519|7185529 2L + 7185317 7185388 3'utr CG4495 FlyBase G2745.1 CGCTTCAAGCGCCCCAATCTTAGTCACTTTTTCCTACGCTTACGCTTTTTACTATTTATTTTTGTAGTTAAC 34 7185355 0.991689567 8 33 357 1 1.633468456 0.023255814 0.264705882 0.418604651 34 0 0 43 2L:7185317-7185388 8 CG4495 FBtr0079405|FBtr0113028 7185291|7185291 7185519|7185529 TACGCTTA 8mer-A1 dme-miR-965-3p 2L + 7185306 7185371 3'utr CG4495 FlyBase G2169.1 GTGGATTCTCCCGCTTCAAGCGCCCCAATCTTAGTCACTTTTTCCTACGCTTACGCTTTTTACTAT 21 7185356 0.912091063 9 20 199 0.967741935 1.477121255 0 0.380952381 0.580645161 21 1 0 30 2L:7185306-7185371 8 23.5 164 FBgn0031893 272.69 17.27 26.35 0.086178444 1.36074117 0.891840607 -4 -5 -4.5 0.5 dme-miR-8-3p 7mer-A1 AGTATTA 2L 7195195 7195201 - 2L_7195195_7195201_- 0.782293209 0.607721868 0.695007539 0.12344055 CG4502 FBtr0079416|FBtr0079417 7194906|7194906 7195555|7195555 2L - 7195175 7195214 3'utr CG4502 FlyBase G8451.1 AAATGGATATTTAAGTATTATTAGTTAAACAGGAACAAAA 11 7195205 0.992192846 5 9 109 0.846153846 1.041392685 0.307692308 0.181818182 0.307692308 11 2 0 11 2L:7195175-7195214 7 CG4502 FBtr0079416|FBtr0079417 7194906|7194906 7195555|7195555 AGTATTA 7mer-A1 dme-miR-8-3p 2L - 7195176 7195236 3'utr CG4502 FlyBase G6566.1 ATAGGAAGTTTCGCCGAATACAAAATGGATATTTAAGTATTATTAGTTAAACAGGAACAAA 11 7195204 0.992249327 5 8 83 0.769230769 0.698970004 0.230769231 0.181818182 0.307692308 11 2 1 10 2L:7195176-7195236 7 10 165 FBgn0031896 751.2833333 44.36333333 68.21333333 0.013310557 0.225411376 0.146598905 4 3 3.5 0.5 dme-miR-1003-3p 8mer-A1 ATGTGAGA 2L 7205677 7205684 - 2L_7205677_7205684_- 0.625552208 0.624843902 0.625198055 0.000500844 CG13784 FBtr0110799|FBtr0330197|FBtr0330199|FBtr0330198 7205251|7204536|7205251|7205251 7208015|7208015|7206347|7206347 2L - 7205634 7205714 3'utr CG13784 FlyBase G8460.1 AGAACATAAAACCAATGTACATTACTTCTTATGTGAGATGCAGCTACAAAAATTAGCTTACAATGTAAACTAGTTTTAAAC 95 7205677 0.828359519 13 90 691 0.946428571 1.72427587 0.017857143 0.147368421 0.276785714 95 5 1 106 2L:7205634-7205714 8 CG13784 FBtr0330198|FBtr0330199|FBtr0330197|FBtr0110799 7205251|7205251|7204536|7205251 7206347|7206347|7208015|7208015 ATGTGAGA 8mer-A1 dme-miR-1003-3p 2L - 7205582 7205717 3'utr CG13784 FlyBase G6573.1 ACTAGAACATAAAACCAATGTACATTACTTCTTATGTGAGATGCAGCTACAAAAATTAGCTTACAATGTAAACTAGTTTTAAACATTTAGTTTCGGACAATGTGAATTTAAAGAAAAGGGTTTCAGCTGGGGAAGG 77 7205677 0.984363879 17 71 562 0.924369748 1.740362689 0.12605042 0.38961039 0.605042017 77 8 1 110 2L:7205582-7205717 8 66 166 FBgn0031897 1244.07 88.35 137.0766667 0.053051677 0.747028862 0.481482382 -7 -7 -7 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2L 7220413 7220420 - 2L_7220413_7220420_- 0.42096489 0.566469943 0.493717416 0.102887572 ico FBtr0079413|FBtr0079413|FBtr0079413 7220367|7220367|7220367 7220532|7220532|7220532 2L - 7220382 7220440 3'utr ico FlyBase G8472.1 ACAACAATTTTCAGTTTTCACTGTGATAAATGCGAAGTGTACAGTTATTTGTATAATAA 23 7220425 0.987635954 8 20 183 0.870967742 1.431363764 0.096774194 0.304347826 0.483870968 23 4 0 27 2L:7220382-7220440 8 ico FBtr0079413|FBtr0079413|FBtr0079413 7220367|7220367|7220367 7220532|7220532|7220532 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 7220401 7220429 3'utr ico FlyBase G6584.1 CAGTTTTCACTGTGATAAATGCGAAGTGT 14 7220424 0.834684988 4 10 106 0.823529412 1.146128036 0 0.214285714 0.352941176 14 3 0 14 2L:7220401-7220429 8 18.5 167 FBgn0263133 394.38 19.21 29.5 0.046909072 0.963040083 0.627118644 5 4 4.5 0.5 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2L 7472626 7472632 - 2L_7472626_7472632_- 0.537998511 0.599532521 0.568765516 0.043511109 Ziz FBtr0330722|FBtr0330726|FBtr0330724|FBtr0332201|FBtr0330721|FBtr0330728|FBtr0330723|FBtr0330725|FBtr0330727 7472511|7472511|7472511|7472511|7472511|7472511|7472511|7472511|7472511 7473645|7473645|7473645|7473110|7473645|7473645|7473645|7473645|7473645 2L - 7472604 7472682 3'utr Ziz FlyBase G8509.1 GAAATTAGTTTTAGTGTTAGACAAATAAGTTCCCGCAAGCAACAGAACTTACCAAAGTATTCAGATAAAGGAAAAACCT 109 7472633 0.796257468 8 108 470 0.991935484 2.089905111 0.048387097 0.119266055 0.225806452 109 1 0 123 2L:7472604-7472682 7 Ziz FBtr0330725|FBtr0330727|FBtr0330728|FBtr0330723|FBtr0332201|FBtr0330721|FBtr0330722|FBtr0330726|FBtr0330724 7472511|7472511|7472511|7472511|7472511|7472511|7472511|7472511|7472511 7473645|7473645|7473645|7473645|7473110|7473645|7473645|7473645|7473645 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2L - 7472539 7472680 3'utr Ziz FlyBase G6606.1 AATTAGTTTTAGTGTTAGACAAATAAGTTCCCGCAAGCAACAGAACTTACCAAAGTATTCAGATAAAGGAAAAACCTATTTAACAGATCTACGGATATATATTTACATACATGCATTTTCTAGTGAAATCGTATAATGAACT 104 7472633 0.971371604 15 100 586 0.959183673 1.672097858 0.020408163 0.346153846 0.537414966 104 4 2 141 2L:7472539-7472680 7 83.5 168 FBgn0260486 1355.053333 19.13333333 29.37 0.061621191 4.364111498 2.843037113 1 1 1 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 7786831 7786837 - 2L_7786831_7786837_- 0.777749558 0.754795071 0.766272314 0.016231283 CG7149 FBtr0079496|FBtr0079496|FBtr0079496|FBtr0343406|FBtr0343406|FBtr0343406 7786158|7786158|7786158|7786158|7786158|7786158 7786899|7786899|7786899|7786899|7786899|7786899 2L - 7786804 7786852 3'utr CG7149 FlyBase G8601.1 CAAAATCAACCATCTTGTGATATATAGTATATATACATATATATATAAA 27 7786839 0.9920715 6 20 234 0.724137931 0.720159303 0.034482759 0.074074074 0.137931034 27 5 3 21 2L:7786804-7786852 7 CG7149 FBtr0079496|FBtr0079496|FBtr0079496|FBtr0343406|FBtr0343406|FBtr0343406 7786158|7786158|7786158|7786158|7786158|7786158 7786899|7786899|7786899|7786899|7786899|7786899 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 7786814 7786852 3'utr CG7149 FlyBase G6665.1 CAAAATCAACCATCTTGTGATATATAGTATATATACATA 16 7786838 0.743488012 4 14 137 0.875 1.021189299 0 0.3125 0.541666667 16 2 1 21 2L:7786814-7786852 7 21 169 FBgn0031948 141.2833333 6.946666667 10.71666667 0.14863749 3.02303263 1.959564541 2 1 1.5 0.5 dme-miR-79-3p 7mer-A1 AGCTTTA 2L 8134398 8134404 - 2L_8134398_8134404_- 0.551897211 0.574053351 0.562975281 0.015666799 CG8552 FBtr0339673|FBtr0302595|FBtr0344863|FBtr0079641 8134245|8134245|8134245|8134245 8134622|8134622|8134622|8134622 2L - 8134308 8134424 3'utr CG8552 FlyBase G8873.1 AAAACCGTAGCAAGTTCTTGAGCTTTACAAAATTACCTATGTATTGATCGGATTGGCACCCATGAGACCTATTTGTTATTTTTGTAATATCGCCTGTGTAACAACTAACTTTGTAAC 37 8134406 0.971145721 11 36 275 0.979166667 1.672097858 0.104166667 0.243243243 0.416666667 37 1 0 47 2L:8134308-8134424 7 CG8552 FBtr0344863|FBtr0079641|FBtr0339673|FBtr0302595 8134245|8134245|8134245|8134245 8134622|8134622|8134622|8134622 AGCTTTA 7mer-A1 dme-miR-79-3p 2L - 8134305 8134424 3'utr CG8552 FlyBase G6888.1 AAAACCGTAGCAAGTTCTTGAGCTTTACAAAATTACCTATGTATTGATCGGATTGGCACCCATGAGACCTATTTGTTATTTTTGTAATATCGCCTGTGTAACAACTAACTTTGTAACATT 13 8134406 0.982793012 8 12 96 1 1.322219295 0.142857143 0.538461538 0.714285714 13 0 0 21 2L:8134305-8134424 7 13 170 FBgn0031990 1987.903333 36.46 55.94333333 0.006539553 0.356555129 0.232378002 2 2 2 0.5 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 818310 818317 - 2L_818310_818317_- 0.451473891 0.461946707 0.456710299 0.007405388 CG3876 FBtr0078039 818077 818506 2L - 818272 818375 3'utr CG3876 FlyBase G6659.1 GAGGGATTCCGAGAGGAGACGATTCAGTATGACAGGATCTGATGCATACACACGCTTTTAGCTTTAGGCTCTAACACGATTTTACACCTAAAGGATCTAGTTAA 243 818318 0.985040237 14 236 1911 0.966666667 2.115610512 0.22962963 0.090534979 0.181481481 243 8 1 261 2L:818272-818375 8 CG3876 FBtr0078039 818077 818506 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 818270 818376 3'utr CG3876 FlyBase G5208.1 CGAGGGATTCCGAGAGGAGACGATTCAGTATGACAGGATCTGATGCATACACACGCTTTTAGCTTTAGGCTCTAACACGATTTTACACCTAAAGGATCTAGTTAAAT 183 818318 0.894220167 17 178 1423 0.977198697 2.176091259 0.159609121 0.459016393 0.67752443 183 6 1 300 2L:818270-818376 8 170.5 171 FBgn0031284 55.33333333 4.87 7.336666667 3.081325301 35.01026694 23.23943662 1 1 1 0.5 dme-miR-318-3p 6mer2-7 CCAGTG 2L 824367 824372 - 2L_824367_824372_- 0.498406716 0.990698428 0.744552572 0.348102799 CG3862 FBtr0078038 824327 824432 2L - 824353 824419 3'utr CG3862 FlyBase G6664.1 TTTTAGATTAGTTAACTTAAAGTATACTCTAGTCGAAAATACTATTGCCAGTGGCAGCCCAACCAAT 30 824393 0.978085751 9 25 174 0.80952381 0.753327667 0.047619048 0.2 0.428571429 30 3 5 34 2L:824353-824419 6 CG3862 FBtr0078038 824327 824432 CCAGTG 6mer2-7 dme-miR-318-3p 2L - 824355 824412 3'utr CG3862 FlyBase G5212.1 TTAGTTAACTTAAAGTATACTCTAGTCGAAAATACTATTGCCAGTGGCAGCCCAACCA 14 824375 0.978881592 8 11 79 0.826086957 0.977723605 0 0.5 0.695652174 14 3 1 19 2L:824355-824412 6 7.5 172 FBgn0031286 219 17.47666667 26.73666667 0.034246575 0.42914362 0.280513652 21 3 12 0.5 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2L 8259591 8259597 - 2L_8259591_8259597_- 0.45816482 0.686982784 0.572573802 0.161798759 Btk29A FBtr0330693|FBtr0330693|FBtr0330692|FBtr0330692|FBtr0079618|FBtr0079618|FBtr0079615|FBtr0079615|FBtr0112835|FBtr0112835|FBtr0112836|FBtr0112836|FBtr0079617|FBtr0079617 8259503|8259503|8259503|8259503|8258753|8258753|8259503|8259503|8259503|8259503|8258371|8258371|8259503|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537 2L - 8259578 8259607 3'utr Btk29A FlyBase G8997.1 ATGAACGTTTTACTTAATTAATTTTATCAT 9 8259599 0.818557822 2 9 112 1 1.041392685 0.636363636 0.222222222 0.363636364 9 0 0 11 2L:8259578-8259607 7 Btk29A FBtr0112836|FBtr0112836|FBtr0079617|FBtr0079617|FBtr0079615|FBtr0079615|FBtr0112835|FBtr0112835|FBtr0079618|FBtr0079618|FBtr0330693|FBtr0330693|FBtr0330692|FBtr0330692 8258371|8258371|8259503|8259503|8259503|8259503|8259503|8259503|8258753|8258753|8259503|8259503|8259503|8259503 8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537|8260537 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2L - 8259580 8259608 3'utr Btk29A FlyBase G6987.1 TATGAACGTTTTACTTAATTAATTTTATC 7 8259599 0.725815484 3 6 82 0.888888889 0.903089987 0.333333333 0.285714286 0.444444444 7 1 0 8 2L:8259580-8259608 7 8 173 FBgn0003502 699.44 22.40333333 34.31333333 0.011437722 0.357089719 0.233145522 2 2 2 0.5 dme-miR-276a-3p 7mer-A1 GTTCCTA 2L 8316765 8316771 + 2L_8316765_8316771_+ 0.568455609 0.591995026 0.580225317 0.016644869 CG7806 FBtr0079600 8316672 8317011 2L + 8316735 8316784 3'utr CG7806 FlyBase G3042.1 ATTACTTTGTTTAATTTTTATCATACTTGTGTTCCTAACTAACAATTCCA 80 8316761 0.775187002 6 79 830 0.979166667 1.496006599 0 0.175 0.3125 80 0 2 94 2L:8316735-8316784 7 CG7806 FBtr0079600 8316672 8317011 GTTCCTA 7mer-A1 dme-miR-276a-3p 2L + 8316736 8316782 3'utr CG7806 FlyBase G2399.1 TTACTTTGTTTAATTTTTATCATACTTGTGTTCCTAACTAACAATTC 54 8316761 0.947220572 5 52 531 0.972972973 1.857332496 0 0.277777778 0.472972973 54 2 0 72 2L:8316736-8316782 7 66.5 174 FBgn0032018 954.6066667 23.09666667 35.38666667 0.069662199 2.879203348 1.879238885 4 4 4 0.5 dme-miR-980-3p 7mer-m8 GGCAGCT 2L 832022 832028 + 2L_832022_832028_+ 0.449947103 0.403518456 0.426732779 0.032829978 dock FBtr0332973|FBtr0078013|FBtr0078014|FBtr0078015 831922|831922|831922|831922 832331|833241|833241|833241 2L + 831979 832091 3'utr dock FlyBase G911.1 AACACACATATGCAACACAAAGATATACCAAGGCTAACTTGTAGGCAGCTCAGCTCAGCGCGACGTGTAGTTCAATATAGTTCGGTTTGGATATTTAATTATGGACTCAGTTT 38 832019 0.850271694 9 37 216 0.975609756 1.602059991 0.268292683 0.078947368 0.146341463 38 1 0 40 2L:831979-832091 7 dock FBtr0332973|FBtr0078013|FBtr0078014|FBtr0078015 831922|831922|831922|831922 832331|833241|833241|833241 GGCAGCT 7mer-m8 dme-miR-980-3p 2L + 831974 832042 3'utr dock FlyBase G727.1 TCAACAACACACATATGCAACACAAAGATATACCAAGGCTAACTTGTAGGCAGCTCAGCTCAGCGCGAC 13 832019 0.958801057 5 13 62 1 1.301029996 0.2 0.538461538 0.7 13 0 0 20 2L:831974-832042 7 17 175 FBgn0010583 684.1466667 22.6 34.75 0.024848473 0.752212389 0.489208633 3 3 3 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2L 8322382 8322387 - 2L_8322382_8322387_- 0.815040344 0.68055924 0.747799792 0.095092498 CG7781 FBtr0079609|FBtr0079609|FBtr0079609|FBtr0346462|FBtr0346462|FBtr0346462 8321278|8321278|8321278|8321278|8321278|8321278 8322487|8322487|8322487|8322487|8322487|8322487 2L - 8322355 8322453 5'utr CG7781 FlyBase G9045.1 TTGTTTGTTTTATCGATGCATCCACCCAGTTTTTCTTTCGTATTGCTGCTGCTGACTCTTTGACTTCTGTGACACTTTCACCGCTTTCTCCCGCCCCCC 40 8322389 0.81242058 13 38 386 0.958333333 1.361727836 0.270833333 0.15 0.291666667 40 1 1 46 2L:8322355-8322453 6 CG7781 FBtr0079609|FBtr0079609|FBtr0079609|FBtr0346462|FBtr0346462|FBtr0346462 8321278|8321278|8321278|8321278|8321278|8321278 8322487|8322487|8322487|8322487|8322487|8322487 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2L - 8322353 8322451 5'utr CG7781 FlyBase G7021.1 GTTTGTTTTATCGATGCATCCACCCAGTTTTTCTTTCGTATTGCTGCTGCTGACTCTTTGACTTCTGTGACACTTTCACCGCTTTCTCCCGCCCCCCTT 31 8322393 0.989837963 15 27 268 0.860465116 1.568201724 0.162790698 0.35483871 0.534883721 31 6 0 37 2L:8322353-8322451 6 16 176 FBgn0032021 62 3.843333333 5.696666667 0.258064516 4.163052905 2.808660035 2 6 4 0.5 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 8412354 8412360 - 2L_8412354_8412360_- 0.80207912 0.805077611 0.803578365 0.00212026 CG13398 FBtr0331990 8412142 8413550 2L - 8412341 8412400 3'utr CG13398 FlyBase G9113.1 AAAAAAAAACAATGGTAGAAAGCATCGCGTTGCATTGTCCGCTGTGAGTTTATAATTTTT 35 8412365 0.98317773 8 31 285 0.909090909 1.602059991 0.295454545 0.257142857 0.409090909 35 4 0 40 2L:8412341-8412400 7 CG13398 FBtr0331990 8412142 8413550 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L - 8412281 8412383 3'utr CG13398 FlyBase G7071.1 GAAAGCATCGCGTTGCATTGTCCGCTGTGAGTTTATAATTTTTTACATATATATATCGCTGAATTGTTATTCAATTTGTTAGGAGTTATATACACTGAGCATT 23 8412365 0.979078631 11 21 203 0.864864865 1.505149978 0.27027027 0.434782609 0.648648649 23 5 0 32 2L:8412281-8412383 7 22.5 177 FBgn0032042 445.3533333 18.47333333 28.30333333 0.050521683 1.217971851 0.794959369 5 5 5 0.5 dme-miR-79-3p 8mer-A1 TAGCTTTA 2L 8449759 8449766 - 2L_8449759_8449766_- 0.438078624 0.418192832 0.428135728 0.014061384 fu12 FBtr0079703|FBtr0302160|FBtr0079704|FBtr0340242 8449689|8449689|8449689|8449689 8450088|8450088|8450088|8450088 2L - 8449702 8449787 3'utr fu12 FlyBase G9139.1 TAAGCGCATTTGTTGGATGTTTAGCTTTATGCAAATATTGTATTGATTTATATGTGAATAATGAAATGAGACCTATTTAATAAAAC 60 8449767 0.79673289 15 59 543 0.977272727 1.934498451 0.136363636 0.3 0.522727273 60 2 0 86 2L:8449702-8449787 8 fu12 FBtr0079703|FBtr0302160|FBtr0079704|FBtr0340242 8449689|8449689|8449689|8449689 8450088|8450088|8450088|8450088 TAGCTTTA 8mer-A1 dme-miR-79-3p 2L - 8449689 8449786 3'utr fu12 FlyBase G7086.1 AAGCGCATTTGTTGGATGTTTAGCTTTATGCAAATATTGTATTGATTTATATGTGAATAATGAAATGAGACCTATTTAATAAAACATTTTGCACTGAA 46 8449767 0.98977421 11 45 441 0.986842105 1.875061263 0.25 0.434782609 0.657894737 46 1 0 75 2L:8449689-8449786 8 40.5 178 FBgn0026718 82 6.056666667 9.28 0.493902439 6.68684645 4.364224138 1 1 1 0.5 dme-miR-184-3p 7mer-m8 TCCGTCC 2L 8490388 8490394 + 2L_8490388_8490394_+ 0.499470411 0.647292693 0.573381552 0.104526151 CG13088 FBtr0079681 8490347 8490546 2L + 8490368 8490403 3'utr CG13088 FlyBase G3203.1 AAATGACATTTCTACCTCAATCCGTCCGGTATACGA 16 8490388 0.724762169 4 14 112 0.894736842 1.230448921 0 0.1875 0.315789474 16 2 0 17 2L:8490368-8490403 7 CG13088 FBtr0079681 8490347 8490546 TCCGTCC 7mer-m8 dme-miR-184-3p 2L + 8490367 8490400 3'utr CG13088 FlyBase G2532.1 TAAATGACATTTCTACCTCAATCCGTCCGGTATA 22 8490397 0.699608806 5 19 149 0.875 1.322219295 0 0.090909091 0.166666667 22 3 0 21 2L:8490367-8490400 7 19 179 FBgn0032047 48.33333333 4.033333333 6.113333333 0.393103448 4.710743802 3.107960742 0 -9 -4.5 0.5 dme-miR-12-5p 7mer-A1 ATACTCA 2L 8668261 8668267 + 2L_8668261_8668267_+ 0.582582331 0.615684161 0.599133246 0.023406578 Sema-1a FBtr0303878|FBtr0303879|FBtr0329931|FBtr0303877|FBtr0329932 8666210|8664168|8664168|8666210|8666034 8672041|8670014|8671917|8671917|8670014 2L + 8668202 8668285 3'utr Sema-1a FlyBase G3220.1 GGGGCATTGCTAATGTTGTTCTCATATTAAAGTATATTAGAAATAGGATAAGCTAATTGATACTCAATATTTTGTATGAGAAAC 22 8668259 0.990017337 5 21 208 0.96 1.380211242 0.12 0.090909091 0.2 22 1 0 24 2L:8668202-8668285 7 Sema-1a FBtr0303877|FBtr0329931|FBtr0303879|FBtr0303878|FBtr0329932 8666210|8664168|8664168|8666210|8666034 8671917|8671917|8670014|8672041|8670014 ATACTCA 7mer-A1 dme-miR-12-5p 2L + 8668202 8668282 3'utr Sema-1a FlyBase G2546.1 GGGGCATTGCTAATGTTGTTCTCATATTAAAGTATATTAGAAATAGGATAAGCTAATTGATACTCAATATTTTGTATGAGA 15 8668259 0.987158117 5 14 122 0.952380952 1.301029996 0.142857143 0.333333333 0.523809524 15 1 0 20 2L:8668202-8668282 7 16 180 FBgn0011259 295.3333333 4.256666667 6.55 0.054176072 3.75880971 2.442748092 2 2 2 0.5 dme-miR-14-3p 7mer-m8 AAGACTG 2L 876828 876834 + 2L_876828_876834_+ 0.592521877 0.590995754 0.591758815 0.001079116 PNUTS FBtr0091489|FBtr0332000 876736|876736 877038|877038 2L + 876801 876854 3'utr PNUTS FlyBase G935.3 AGATTTCCGAAATCGAGTCCCCACATGAAGACTGTATCCAGGTTAGCCGCCGCA 328 876826 0.890271768 7 319 1537 0.9765625 2.096910013 0.111979167 0.131097561 0.2578125 328 7 2 375 2L:876801-876854 7 PNUTS FBtr0332000|FBtr0091489 876736|876736 877038|877038 AAGACTG 7mer-m8 dme-miR-14-3p 2L + 876736 876876 stop_codon PNUTS FlyBase G753.1 AGGACCTACCCGAATCTTCTGCGGAAGATTCAGCTGCATAGATCTCAGACGCGCAACGGAGGCCAAGATTTCCGAAATCGAGTCCCCACATGAAGACTGTATCCAGGTTAGCCGCCGCAAGTTAATCTAAGTGTATATATG 197 876826 0.960188933 16 181 895 0.932659933 1.965358514 0.131313131 0.355329949 0.572390572 197 18 2 277 2L:876736-876876 7 247.5 181 FBgn0053526 1548.73 47.96666667 73.53 0.159808359 5.159833218 3.365973072 2 2 2 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2L 8829076 8829082 + 2L_8829076_8829082_+ 0.694918529 0.692905371 0.69391195 0.001423477 SoxN FBtr0330210|FBtr0330210|FBtr0330210|FBtr0079733|FBtr0079733|FBtr0079733 8828778|8828778|8828778|8828211|8828211|8828211 8829670|8829670|8829670|8829670|8829670|8829670 2L + 8828888 8829143 3'utr SoxN FlyBase G3269.1 TCGAATTTCGAAGTGGCAGAGTAACACATGCGCATATAAATAAATGAGAATAGGATTAATGTTTAGTCATTTAAATGATGCATACGCACTGTTGTACCACAATAGTAAGATGACAACTCACTTGCATTCCATACCGTTCTGCTTCGATTTCCCTTGATTTCCCGCTTGTTGCATAGCTAAAACAATTGTGTGATACAAATAAACTGTTGCCAATTACGGGGACAACGGCAACAACAACAAATTCGTTTGGTTTAGC 161 8829074 0.974663391 25 153 954 0.954773869 1.579783597 0.070351759 0.180124224 0.336683417 161 5 4 190 2L:8828888-8829143 7 SoxN FBtr0330210|FBtr0330210|FBtr0330210|FBtr0079733|FBtr0079733|FBtr0079733 8828778|8828778|8828778|8828211|8828211|8828211 8829670|8829670|8829670|8829670|8829670|8829670 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2L + 8829032 8829122 3'utr SoxN FlyBase G2583.3 CGATTTCCCTTGATTTCCCGCTTGTTGCATAGCTAAAACAATTGTGTGATACAAATAAACTGTTGCCAATTACGGGGACAACGGCAACAAC 68 8829074 0.969964895 8 64 382 0.969072165 1.973127854 0.020618557 0.323529412 0.525773196 68 3 0 94 2L:8829032-8829122 7 84.5 182 FBgn0029123 4.333333333 0.126666667 0.19 19.5 667.1052632 444.7368421 2 2 2 0.5 dme-miR-970-3p 7mer-m8 TCTTATG 2L 8829333 8829339 + 2L_8829333_8829339_+ 0.447886264 0.461817235 0.45485175 0.009850634 SoxN FBtr0330210|FBtr0079733 8828778|8828211 8829670|8829670 2L + 8829221 8829355 3'utr SoxN FlyBase G3271.1 GACGCGGAATCAAGCACAAGTTTAGTAGGAGTAAAGGCAGTTGTGGCGAGGCGATGAAAATATTTCAGAAAAGCAAAGAAAAATGTCAAAAAACATTCTATTTTATAAATTCTCTTATGCATTAAGTAATTATAA 42 8829335 0.990102542 11 40 382 0.943396226 1.698970004 0.245283019 0.238095238 0.396226415 42 3 0 50 2L:8829221-8829355 7 SoxN FBtr0330210|FBtr0079733 8828778|8828211 8829670|8829670 TCTTATG 7mer-m8 dme-miR-970-3p 2L + 8829315 8829349 3'utr SoxN FlyBase G2585.1 ATTCTATTTTATAAATTCTCTTATGCATTAAGTAA 24 8829335 0.757241616 3 24 249 1 1.544068044 0.314285714 0.333333333 0.542857143 24 0 0 35 2L:8829315-8829349 7 28 183 FBgn0029123 4.333333333 0.126666667 0.19 6.461538462 221.0526316 147.3684211 -2 -2 -2 0.5 dme-bantam-3p 6mer3-8 TGATCT 2L 8953627 8953632 - 2L_8953627_8953632_- 0.584100383 0.682552238 0.63332631 0.069615935 CG31886 FBtr0079787|FBtr0113029|FBtr0303885 8953479|8953479|8953479 8954021|8954021|8954021 2L - 8953513 8953806 3'utr CG31886 FlyBase G9261.1 GAATGTAGCCTAAGACGCAAGCATTTTTTGGTCTACAAATGAAAATGGGAAAATAGTAAGATAAAATATGTAAATTGTATATCGTGTACAAATAAATGTAGATACCAAGTAATTTTAAGATGAAATTGTAGTACTTATCAATTAATTCAATTATTCTCATTTTATAAACGACTTTGATCTTTTTGTTTACCTGAACACATTTTAAAGACAATTCTTATGTAGTCATTTGAAGAGGATTAGTTTTAATGCTTTTGTTGACTTTGTATAAGTGATTTGAATTTTAAGGAAATTTTC 969 8953624 0.831691 75 931 9074 0.963288109 1.905616011 0.106145251 0.226006192 0.401436552 969 32 14 1207 2L:8953513-8953806 6 CG31886 FBtr0303885|FBtr0113029|FBtr0079787 8953479|8953479|8953479 8954021|8954021|8954021 TGATCT 6mer3-8 dme-bantam-3p 2L - 8953513 8953805 3'utr CG31886 FlyBase G7179.1 AATGTAGCCTAAGACGCAAGCATTTTTTGGTCTACAAATGAAAATGGGAAAATAGTAAGATAAAATATGTAAATTGTATATCGTGTACAAATAAATGTAGATACCAAGTAATTTTAAGATGAAATTGTAGTACTTATCAATTAATTCAATTATTCTCATTTTATAAACGACTTTGATCTTTTTGTTTACCTGAACACATTTTAAAGACAATTCTTATGTAGTCATTTGAAGAGGATTAGTTTTAATGCTTTTGTTGACTTTGTATAAGTGATTTGAATTTTAAGGAAATTTTC 741 8953623 0.817424036 78 711 7034 0.960637301 1.96933118 0.11715089 0.326585695 0.532333646 741 32 10 1025 2L:8953513-8953805 6 526 184 FBgn0032079 1123.893333 53.47 82.11333333 0.468015945 9.837291939 6.405780628 -8 -9 -8.5 0.5 dme-miR-305-5p 7mer-A1 GTACAAA 2L 8970040 8970046 + 2L_8970040_8970046_+ 0.530838239 0.454525919 0.492682079 0.053960945 CG18088 FBtr0332187|FBtr0079759 8970025|8970025 8970627|8970259 2L + 8970028 8970072 3'utr CG18088 FlyBase G3294.1 TAAGTCTCTTATGTACAAAATAAAGTTTAAGTTTAGTTTAAAACT 48 8970038 0.679852743 7 43 378 0.893939394 1.16879202 0.045454545 0.3125 0.5 48 4 3 59 2L:8970028-8970072 7 CG18088 FBtr0079759|FBtr0332187 8970025|8970025 8970259|8970627 GTACAAA 7mer-A1 dme-miR-305-5p 2L + 8970029 8970060 3'utr CG18088 FlyBase G2604.1 AAGTCTCTTATGTACAAAATAAAGTTTAAGTT 14 8970037 0.657229584 3 12 100 0.857142857 0.77815125 0.19047619 0.428571429 0.619047619 14 1 2 18 2L:8970029-8970060 7 30.5 185 FBgn0032082 216 12.59666667 19.19 0.141203704 2.42127547 1.589369463 2 3 2.5 0.5 dme-miR-31a-5p 6mer3-8 TCTTGC 2L 9245858 9245863 + 2L_9245858_9245863_+ 0.756470067 0.835372922 0.795921494 0.055792705 tai FBtr0333405|FBtr0303872|FBtr0303871|FBtr0303873|FBtr0304974|FBtr0303870 9245807|9245807|9245807|9245807|9245807|9245807 9247186|9247186|9247186|9250211|9250211|9247186 2L + 9245819 9245897 3'utr tai FlyBase G3332.1 CCTAGTTCAGAACCAAGGATCACGTACAACCAAAACTTCTCTTGCGCACGCATTTATGGCTCTAGATACGAAAAACAAT 26 9245874 0.975721882 12 25 157 0.96969697 1.204119983 0.060606061 0.115384615 0.303030303 26 0 1 32 2L:9245819-9245897 6 tai FBtr0304974|FBtr0303870|FBtr0303871|FBtr0303873|FBtr0333405|FBtr0303872 9245807|9245807|9245807|9245807|9245807|9245807 9250211|9247186|9247186|9250211|9247186|9247186 TCTTGC 6mer3-8 dme-miR-31a-5p 2L + 9245832 9245885 3'utr tai FlyBase G2628.1 CAAGGATCACGTACAACCAAAACTTCTCTTGCGCACGCATTTATGGCTCTAGAT 12 9245860 0.970394221 6 12 70 1 1.255272505 0.222222222 0.333333333 0.555555556 12 0 0 18 2L:9245832-9245885 6 14.5 186 FBgn0041092 2562.806667 37.60666667 57.55666667 0.005657859 0.385569934 0.251925639 -16 -2 -9 0.5 dme-miR-8-3p 7mer-A1 AGTATTA 2L 9435242 9435248 + 2L_9435242_9435248_+ 0.719567463 0.668441709 0.694004586 0.0361514 scat FBtr0079809 9434914 9435341 2L + 9435200 9435266 3'utr scat FlyBase G3372.1 TGCGTACAAATCAATGGCGGTAAACGATTCCCTTGTTCCTTTAGTATTATTATCGTTAGCTGGATTT 46 9435240 0.92517206 10 46 453 1 1.73239376 0.314814815 0.173913043 0.296296296 46 0 0 54 2L:9435200-9435266 7 scat FBtr0079809 9434914 9435341 AGTATTA 7mer-A1 dme-miR-8-3p 2L + 9435183 9435261 3'utr scat FlyBase G2670.1 TAATCAACAAATTTCAATGCGTACAAATCAATGGCGGTAAACGATTCCCTTGTTCCTTTAGTATTATTATCGTTAGCTG 27 9435240 0.989730428 8 26 253 1 1.653212514 0.244444444 0.555555556 0.733333333 27 0 0 45 2L:9435183-9435261 7 30 187 FBgn0011232 207.99 7.106666667 10.93333333 0.144237704 4.221388368 2.743902439 2 2 2 0.5 dme-miR-1008-3p 7mer-A1 GCTGTGA 2L 9520288 9520294 + 2L_9520288_9520294_+ 0.396079537 0.568622162 0.48235085 0.122006113 CG33298 FBtr0089854|FBtr0301065|FBtr0089853|FBtr0301064 9519753|9519753|9519767|9519753 9520696|9520696|9520696|9520696 2L + 9520103 9520333 3'utr CG33298 FlyBase G3407.2 ACTAGGGAGCCAGAAGTGCTCGAGAATTGAACCCAACCTAACCGACTATTGTTAAATAGAAGCGAAAATGCAATGCTTATTTATGTGTACGATTATTTAAACTAGCGACTAATAGATGTATCACCCTAACAGAAATACTTGACAATTCAAACACAACAGAACTCCATTGCGAGTTCGATGATAAGGCTGTGATTCTACACTCATGAAGGATATACCTAAGCATATGATATA 667 9520284 0.872483124 32 627 5108 0.941634241 2.161966616 0.029831388 0.142428786 0.258106355 667 41 4 726 2L:9520103-9520333 7 CG33298 FBtr0301064|FBtr0089853|FBtr0301065|FBtr0089854 9519753|9519767|9519753|9519753 9520696|9520696|9520696|9520696 GCTGTGA 7mer-A1 dme-miR-1008-3p 2L + 9520200 9520334 3'utr CG33298 FlyBase G2694.1 TAAACTAGCGACTAATAGATGTATCACCCTAACAGAAATACTTGACAATTCAAACACAACAGAACTCCATTGCGAGTTCGATGATAAGGCTGTGATTCTACACTCATGAAGGATATACCTAAGCATATGATATAT 441 9520283 0.813376428 19 414 3437 0.939882698 2.329736775 0.021994135 0.392290249 0.607038123 441 39 2 641 2L:9520200-9520334 7 510.5 188 FBgn0032120 1173.196667 22.66 34.66333333 0.435135911 22.52868491 14.72737763 4 5 4.5 0.5 dme-miR-305-5p 7mer-A1 GTACAAA 2L 9573472 9573478 + 2L_9573472_9573478_+ 0.761224444 0.633363817 0.697294131 0.090411097 CG3838 FBtr0079835|FBtr0079834 9572964|9572964 9573572|9573572 2L + 9573414 9573485 3'utr CG3838 FlyBase G3419.1 TGTTAGTTTAAGGACACTGTATATACGCTGCTATTGAAACCTAAACTATAGAATCTGTGTACAAATGAATTT 21 9573447 0.976981402 6 20 138 0.962962963 1.414973348 0 0.238095238 0.407407407 21 1 0 26 2L:9573414-9573485 7 CG3838 FBtr0079835|FBtr0079834 9572964|9572964 9573572|9573572 GTACAAA 7mer-A1 dme-miR-305-5p 2L + 9573424 9573484 3'utr CG3838 FlyBase G2703.1 AGGACACTGTATATACGCTGCTATTGAAACCTAAACTATAGAATCTGTGTACAAATGAATT 10 9573468 0.981415008 7 9 59 0.875 0.669006781 0.0625 0.3 0.5625 10 0 2 14 2L:9573424-9573484 7 7 189 FBgn0032130 513.3333333 25.81 39.59333333 0.013636364 0.271212708 0.176797441 25 4 14.5 0.5 dme-miR-1008-3p 6mer2-7 GCTGTG 2L 9573534 9573539 + 2L_9573534_9573539_+ 0.725393809 0.6809102 0.703152005 0.031454655 CG3838 FBtr0079835|FBtr0079834 9572964|9572964 9573572|9573572 2L + 9573509 9573552 3'utr CG3838 FlyBase G3420.1 TAAAGAGATAGATCGATATCAAACTGCTGTGTGTAATAATAAAC 17 9573540 0.967257934 5 16 120 0.954545455 1.322219295 0.045454545 0.235294118 0.409090909 17 1 0 21 2L:9573509-9573552 6 CG3838 FBtr0079835|FBtr0079834 9572964|9572964 9573572|9573572 GCTGTG 6mer2-7 dme-miR-1008-3p 2L + 9573517 9573553 3'utr CG3838 FlyBase G2704.1 TAGATCGATATCAAACTGCTGTGTGTAATAATAAACA 8 9573540 0.672032578 3 7 58 0.9 0.954242509 0 0.25 0.4 8 1 0 9 2L:9573517-9573553 6 12.5 190 FBgn0032130 513.3333333 25.81 39.59333333 0.024350649 0.484308408 0.315709715 -6 -6 -6 0.5 dme-miR-968-5p 7mer-A1 CTACTTA 2L 9762246 9762252 + 2L_9762246_9762252_+ 0.589680967 0.670789633 0.6302353 0.057352441 zf30C FBtr0079865 9762140 9762375 2L + 9762236 9762274 3'utr zf30C FlyBase G3518.1 ATAATAATATCTACTTAATGACTGGATTAATTAAATAAC 11 9762252 0.632889169 6 10 86 0.933333333 0.84509804 0.066666667 0.272727273 0.466666667 11 0 1 14 2L:9762236-9762274 7 zf30C FBtr0079865 9762140 9762375 CTACTTA 7mer-A1 dme-miR-968-5p 2L + 9762236 9762273 3'utr zf30C FlyBase G2770.1 ATAATAATATCTACTTAATGACTGGATTAATTAAATAA 10 9762250 0.728046111 8 10 76 1 1.255272505 0 0.6 0.777777778 10 0 0 18 2L:9762236-9762273 7 10 191 FBgn0022720 989.03 40.54 62.34666667 0.010110917 0.246669956 0.160393499 -6 -4 -5 0.5 dme-miR-33-5p 7mer-A1 AATGCAA 2L 9964511 9964517 - 2L_9964511_9964517_- 0.675406579 0.707868527 0.691637553 0.02295403 Dref FBtr0310483|FBtr0079889 9964278|9964145 9964544|9964544 2L - 9964498 9964557 stop_codon Dref FlyBase G9473.2 TCACAACAATTAGTCTGCACTGGCGACTACTGTTTCTTATAATGCAAATACTTTTTAATT 29 9964519 0.792664869 9 25 265 0.894736842 1.531478917 0.157894737 0.206896552 0.394736842 29 4 0 34 2L:9964498-9964557 7 Dref FBtr0310483|FBtr0079889 9964278|9964145 9964544|9964544 AATGCAA 7mer-A1 dme-miR-33-5p 2L - 9964442 9964546 stop_codon Dref FlyBase G7361.1 AGTCTGCACTGGCGACTACTGTTTCTTATAATGCAAATACTTTTTAATTACTTTTAACGTAATCCGATCTTGTGTATATGAAAATGACTACCAGGGGCGAGGCAA 17 9964518 0.991908626 11 14 142 0.793103448 1.361727836 0.24137931 0.529411765 0.724137931 17 6 0 23 2L:9964442-9964546 7 14.5 192 FBgn0015664 973.63 41.70666667 63.79666667 0.014892721 0.34766624 0.227284602 2 1 1.5 0.5 dme-miR-965-3p 8mer-A1 TACGCTTA 2L 9994974 9994981 + 2L_9994974_9994981_+ 0.52656018 0.47724398 0.50190208 0.034871819 bib FBtr0329984|FBtr0079929 9994780|9994657 9995538|9995538 2L + 9994964 9994991 3'utr bib FlyBase G3617.1 AAAGATCATGTACGCTTAAGGAACTAAT 12 9994973 0.71476225 3 11 55 0.9375 1.176091259 0.125 0.333333333 0.5 12 1 0 15 2L:9994964-9994991 8 bib FBtr0329984|FBtr0079929 9994780|9994657 9995538|9995538 TACGCTTA 8mer-A1 dme-miR-965-3p 2L + 9994959 9994990 3'utr bib FlyBase G2856.1 CTAGCAAAGATCATGTACGCTTAAGGAACTAA 8 9994972 0.793843936 3 7 37 0.818181818 0.954242509 0.363636364 0.375 0.545454545 8 2 0 9 2L:9994959-9994990 8 10 193 FBgn0000180 1.333333333 0.05 0.08 7.5 200 125 1 2 1.5 0.5 dme-miR-14-3p 7mer-A1 AGACTGA 2L 9995043 9995049 + 2L_9995043_9995049_+ 0.673713537 0.724112577 0.698913057 0.035637545 bib FBtr0329984|FBtr0079929 9994780|9994657 9995538|9995538 2L + 9995002 9995066 3'utr bib FlyBase G3618.1 ATTCACCGAAGGCTAGACTAAACGAGTGATCTAGATGATCTAGACTGAAAGACAGGTGCATTTAA 15 9995040 0.952063857 5 15 65 1 1.278753601 0.157894737 0.266666667 0.421052632 15 0 0 19 2L:9995002-9995066 7 bib FBtr0329984|FBtr0079929 9994780|9994657 9995538|9995538 AGACTGA 7mer-A1 dme-miR-14-3p 2L + 9995001 9995065 3'utr bib FlyBase G2857.1 CATTCACCGAAGGCTAGACTAAACGAGTGATCTAGATGATCTAGACTGAAAGACAGGTGCATTTA 21 9995041 0.953744492 8 19 86 0.966666667 1.161368002 0.1 0.333333333 0.533333333 21 0 1 29 2L:9995001-9995065 7 15.5 194 FBgn0000180 1.333333333 0.05 0.08 11.625 310 193.75 3 2 2.5 0.5 dme-miR-14-3p 7mer-A1 AGACTGA 2R 10036098 10036104 - 2R_10036098_10036104_- 0.672052813 0.68978151 0.680917161 0.012536084 oys FBtr0345630|FBtr0088434|FBtr0339416|FBtr0345629 10034593|10035771|10035534|10035534 10036943|10036943|10036943|10036943 2R - 10036088 10036126 3'utr oys FlyBase G21617.1 AAGTCAACCAAATCCTAACTTTAGACTGAAGCTATTGAC 45 10036106 0.688415768 5 45 251 1 1.748188027 0 0.177777778 0.339285714 45 0 0 56 2R:10036088-10036126 7 oys FBtr0339416|FBtr0345629|FBtr0345630|FBtr0088434 10035534|10035534|10034593|10035771 10036943|10036943|10036943|10036943 AGACTGA 7mer-A1 dme-miR-14-3p 2R - 10036067 10036121 3'utr oys FlyBase G16412.1 AACCAAATCCTAACTTTAGACTGAAGCTATTGACATTTACTAAGCAAACAAAAAG 20 10036106 0.967176757 6 20 108 1 1.544068044 0 0.45 0.685714286 20 0 0 35 2R:10036067-10036121 7 32 195 FBgn0033476 2953.663333 97.33666667 148.7366667 0.010834004 0.328755865 0.215145335 2 2 2 0.5 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 10071028 10071034 - 2R_10071028_10071034_- 0.428444194 0.436736895 0.432590544 0.005863824 CG1371 FBtr0088428 10070979 10071210 2R - 10070963 10071073 3'utr CG1371 FlyBase G21645.1 ATTTTTCACTTTCCATACATAGATTGAGGCAAGTTTATTTGTGTTCGTTATCCACTCTTATAGCTAAAATAAATAAATACAATTAAATAGATTAATTAGACAAGGCTGTTC 125 10071035 0.991200133 11 124 1316 0.993506494 2.184691431 0.181818182 0.16 0.318181818 125 1 0 153 2R:10070963-10071073 7 CG1371 FBtr0088428 10070979 10071210 TGTGTTC 7mer-m8 dme-miR-317-3p 2R - 10070995 10071064 3'utr CG1371 FlyBase G16436.1 TTTCCATACATAGATTGAGGCAAGTTTATTTGTGTTCGTTATCCACTCTTATAGCTAAAATAAATAAATA 71 10071035 0.851982903 7 70 724 0.99 1.995635195 0.18 0.323943662 0.52 71 1 0 99 2R:10070995-10071064 7 82 196 FBgn0033482 1240.746667 38.63666667 59.06666667 0.066089237 2.122336295 1.388261851 1 1 1 0.5 dme-miR-1003-3p 7mer-A1 TGTGAGA 2R 10071122 10071128 - 2R_10071122_10071128_- 0.545211775 0.530664247 0.537938011 0.010286707 CG1371 FBtr0088428 10070979 10071210 2R - 10071111 10071177 3'utr CG1371 FlyBase G21647.1 AGTCACATTTCGAGGTATTCGCGGTAGGTATTCATTTGGTTTTTGTTTCTGTGAGATTTTGTTTAAC 28 10071131 0.668112048 12 25 342 0.947368421 1.255272505 0.447368421 0.25 0.447368421 28 1 1 36 2R:10071111-10071177 7 CG1371 FBtr0088428 10070979 10071210 TGTGAGA 7mer-A1 dme-miR-1003-3p 2R - 10071110 10071251 stop_codon CG1371 FlyBase G16438.1 AGATAAATGCCATCAAGAAGAAAAAGACCAAGAAGATTTAGTTCCGACTGATAGTCGCATTAGTTGTTCAATTTAGTCACATTTCGAGGTATTCGCGGTAGGTATTCATTTGGTTTTTGTTTCTGTGAGATTTTGTTTAACC 32 10071132 0.991875272 16 29 315 0.962264151 1.707570176 0.113207547 0.46875 0.679245283 32 2 0 51 2R:10071110-10071251 7 17 197 FBgn0033482 1240.746667 38.63666667 59.06666667 0.013701427 0.439996549 0.287810384 3 4 3.5 0.5 dme-miR-980-3p 8mer-A1 GGCAGCTA 2R 10095831 10095838 + 2R_10095831_10095838_+ 0.624670235 0.612584902 0.618627568 0.008545598 CG2269 FBtr0088407|FBtr0305653|FBtr0088408|FBtr0088409 10095242|10095242|10095242|10095242 10096416|10096416|10096416|10096416 2R + 10095811 10095858 3'utr CG2269 FlyBase G14538.1 TGAAAGGCAGAGCTCACATTGGCAGCTAGTCCTCCAAAGTCACCGTCA 17 10095829 0.93294433 3 17 87 1 1.301029996 0.1 0.117647059 0.25 17 0 0 20 2R:10095811-10095858 8 CG2269 FBtr0088408|FBtr0088409|FBtr0088407|FBtr0305653 10095242|10095242|10095242|10095242 10096416|10096416|10096416|10096416 GGCAGCTA 8mer-A1 dme-miR-980-3p 2R + 10095810 10095857 3'utr CG2269 FlyBase G11062.1 ATGAAAGGCAGAGCTCACATTGGCAGCTAGTCCTCCAAAGTCACCGTC 8 10095829 0.968057719 3 8 43 1 1.146128036 0 0.5 0.714285714 8 0 0 14 2R:10095810-10095857 8 12.5 198 FBgn0033484 2.333333333 0.08 0.12 5.357142857 156.25 104.1666667 2 2 2 0.5 dme-miR-277-3p 7mer-A1 GCATTTA 2R 10137078 10137084 + 2R_10137078_10137084_+ 0.501019428 0.507964068 0.504491748 0.004910644 gem FBtr0346634|FBtr0089758|FBtr0339428|FBtr0089759 10137011|10137011|10137011|10137011 10137472|10137472|10137472|10137472 2R + 10137064 10137168 3'utr gem FlyBase G14609.1 AAGTATAGTTTATAGCATTTACACGCAGTAAGATGGCACATCGAAACCGTTTTCTATATAGGTTTTAATTTGTATGAGATTTCGCGCAGCAATTTTGAACAAGTA 27 10137075 0.830986318 14 24 239 0.903225806 1.146128036 0.258064516 0.148148148 0.258064516 27 2 1 28 2R:10137064-10137168 7 gem FBtr0339428|FBtr0089759|FBtr0346634|FBtr0089758 10137011|10137011|10137011|10137011 10137472|10137472|10137472|10137472 GCATTTA 7mer-A1 dme-miR-277-3p 2R + 10136979 10137107 stop_codon gem FlyBase G11114.1 CCTTAAGCTGATCAACAAGCAGGACAACAACTAAGCGATGTTCTGGCAACGCGTATGCACTGCAGTAGAGACCACCCGAGCAATCAAGTATAGTTTATAGCATTTACACGCAGTAAGATGGCACATCGA 13 10137096 0.96976766 10 12 70 0.9375 1.176091259 0.125 0.153846154 0.3125 13 1 0 15 2R:10136979-10137107 7 7 199 FBgn0050011 3271.46 66.12333333 101.57 0.002139717 0.105862782 0.068917988 3 -18 -7.5 0.5 dme-miR-317-3p 8mer-A1 TGTGTTCA 2R 10145966 10145973 - 2R_10145966_10145973_- 0.591354296 0.591533379 0.591443838 0.000126643 KCNQ FBtr0310097|FBtr0310094|FBtr0299833|FBtr0301443|FBtr0310096|FBtr0310093|FBtr0310095|FBtr0301444 10145895|10145895|10145895|10145895|10145895|10145895|10145895|10145895 10146074|10146074|10146074|10146074|10146074|10146074|10146074|10146074 2R - 10145934 10145989 3'utr KCNQ FlyBase G21678.1 ATTTTGGGACATCATTTGTGTTCAATTAATTGGTAGCAAACAAATGAAAATCAAAC 6 10145974 0.990604435 3 6 60 1 0.77815125 0.166666667 0 0 6 0 0 6 2R:10145934-10145989 8 KCNQ FBtr0310096|FBtr0310093|FBtr0310095|FBtr0301444|FBtr0310097|FBtr0310094|FBtr0299833|FBtr0301443 10145895|10145895|10145895|10145895|10145895|10145895|10145895|10145895 10146074|10146074|10146074|10146074|10146074|10146074|10146074|10146074 TGTGTTCA 8mer-A1 dme-miR-317-3p 2R - 10145935 10145988 3'utr KCNQ FlyBase G16451.1 TTTTGGGACATCATTTGTGTTCAATTAATTGGTAGCAAACAAATGAAAATCAAA 7 10145974 0.987785899 4 7 55 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 2R:10145935-10145988 8 4.5 200 FBgn0033494 83.10666667 3.453333333 5.296666667 0.054147281 1.303088803 0.849590938 1 1 1 0.5 dme-miR-283-5p 8mer-m1 TGATATTT 2R 10307099 10307106 - 2R_10307099_10307106_- 0.413955383 0.401165501 0.407560442 0.009043825 JhI-1 FBtr0088360 10307028 10307304 2R - 10307089 10307145 3'utr JhI-1 FlyBase G21693.1 AATTAATAGGGCACCTTTGCTTGTATCTGTATATGCTTGTGATATTTGCATTTGCAT 26 10307109 0.993419074 8 22 278 0.805555556 0.763427994 0.194444444 0.346153846 0.527777778 26 3 4 29 2R:10307089-10307145 8 JhI-1 FBtr0088360 10307028 10307304 TGATATTT 8mer-m1 dme-miR-283-5p 2R - 10307090 10307121 3'utr JhI-1 FlyBase G16459.1 ATCTGTATATGCTTGTGATATTTGCATTTGCA 15 10307109 0.675132212 6 13 142 0.857142857 0.653212514 0.19047619 0.333333333 0.523809524 15 0 3 18 2R:10307090-10307121 8 18.5 201 FBgn0028426 503.2766667 22.61333333 34.73333333 0.036759105 0.818101415 0.532629559 3 3 3 0.5 dme-miR-1003-3p 7mer-A1 TGTGAGA 2R 10615726 10615732 + 2R_10615726_10615732_+ 0.51988407 0.516417564 0.518150817 0.002451186 psq FBtr0088278|FBtr0346958|FBtr0088282|FBtr0330607|FBtr0100606|FBtr0088281|FBtr0088277|FBtr0088276|FBtr0088275|FBtr0100607|FBtr0088280|FBtr0088279 10614840|10614840|10614840|10615080|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840 10616248|10617280|10616248|10617280|10616248|10616248|10616248|10616248|10616248|10616248|10616248|10616248 2R + 10615703 10615790 3'utr psq FlyBase G14696.1 GCTTTGTTATAATTTTCGCTTAGTGTGAGACTGAAAGTGCGCCTAAAACTGTTGAAAAACCCCATGCCCAATATTATAGTGAAGACGC 377 10615728 0.968846894 15 358 2591 0.947867299 1.903089987 0.462085308 0.103448276 0.199052133 377 18 4 400 2R:10615703-10615790 7 psq FBtr0088275|FBtr0088280|FBtr0088277|FBtr0100607|FBtr0088276|FBtr0088279|FBtr0100606|FBtr0088281|FBtr0088278|FBtr0346958|FBtr0088282|FBtr0330607 10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10614840|10615080 10616248|10616248|10616248|10616248|10616248|10616248|10616248|10616248|10616248|10617280|10616248|10617280 TGTGAGA 7mer-A1 dme-miR-1003-3p 2R + 10615704 10615758 3'utr psq FlyBase G11187.1 CTTTGTTATAATTTTCGCTTAGTGTGAGACTGAAAGTGCGCCTAAAACTGTTGAA 196 10615728 0.846520173 10 175 1334 0.904761905 1.822821645 0.510204082 0.397959184 0.598639456 196 25 3 266 2R:10615704-10615758 7 267.5 202 FBgn0263102 4429.833333 90.05333333 137.5466667 0.060386019 2.970461948 1.944794494 -2 -2 -2 0.5 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 10640620 10640627 + 2R_10640620_10640627_+ 0.600670748 0.43392287 0.517296809 0.1179085 CG11883 FBtr0113063|FBtr0339461|FBtr0088283 10640587|10640587|10640587 10640990|10641807|10640990 2R + 10640566 10640634 stop_codon CG11883 FlyBase G14707.1 TCACCGAAGCTGAGGACGAGTAAAGAACTACCAAAAGTCATTTGATTTACAATTTGCATTTAATTTATT 13 10640619 0.987557989 5 12 103 0.9375 1.176091259 0 0.230769231 0.375 13 1 0 15 2R:10640566-10640634 8 CG11883 FBtr0088283|FBtr0339461|FBtr0113063 10640587|10640587|10640587 10640990|10641807|10640990 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 10640558 10640631 stop_codon CG11883 FlyBase G11194.1 TTCCACAATCACCGAAGCTGAGGACGAGTAAAGAACTACCAAAAGTCATTTGATTTACAATTTGCATTTAATTT 8 10640594 0.979241583 5 8 51 1 1.041392685 0 0.375 0.545454545 8 0 0 11 2R:10640558-10640631 8 5 203 FBgn0033538 276.0933333 9.15 14.24666667 0.018109818 0.546448087 0.350959289 1 26 13.5 0.5 dme-miR-34-5p 6mer2-7 ACTGCC 2R 10737392 10737397 + 2R_10737392_10737397_+ 0.563287975 0.744147484 0.65371773 0.127886979 CG7220 FBtr0088216|FBtr0088217|FBtr0339465|FBtr0088219 10737369|10737369|10737369|10737369 10738370|10738370|10738370|10738370 2R + 10737378 10737432 5'utr-coding CG7220 FlyBase G14718.1 TGCCATTTACTAATACTGCCTGCTATTGTTTGCTTTGCGCATCCAACCAAAAAAA 15 10737391 0.988080887 6 14 139 0.863636364 0.67669361 0.045454545 0.2 0.454545455 15 0 3 19 2R:10737378-10737432 6 CG7220 FBtr0339465|FBtr0088219|FBtr0088216|FBtr0088217 10737369|10737369|10737369|10737369 10738370|10738370|10738370|10738370 ACTGCC 6mer2-7 dme-miR-34-5p 2R + 10737363 10737424 stop_codon CG7220 FlyBase G11200.1 CTGTTTAGTTAAAATTGCCATTTACTAATACTGCCTGCTATTGTTTGCTTTGCGCATCCAAC 10 10737390 0.986760763 7 10 90 1 1.176091259 0 0.3 0.533333333 10 0 0 15 2R:10737363-10737424 6 10 204 FBgn0033544 368.3233333 29.77 45.41666667 0.027150058 0.335908633 0.220183486 1 2 1.5 0.5 dme-miR-965-3p 7mer-A1 ACGCTTA 2R 10738705 10738711 - 2R_10738705_10738711_- 0.796017497 0.74146918 0.768743338 0.038571473 Mat1 FBtr0088255 10738615 10738757 2R - 10738666 10738747 3'utr Mat1 FlyBase G21856.1 AAATATCCTTTAATGGTCGCACAACCAGAGCACTGAACGCTTAATTTTGTTGAACAAATGTGTCCTATACGAATCCATTCAG 53 10738703 0.967739616 10 51 303 0.95 1.755874856 0.116666667 0.113207547 0.216666667 53 3 0 57 2R:10738666-10738747 7 Mat1 FBtr0088255 10738615 10738757 ACGCTTA 7mer-A1 dme-miR-965-3p 2R - 10738625 10738736 3'utr Mat1 FlyBase G16585.1 AATGGTCGCACAACCAGAGCACTGAACGCTTAATTTTGTTGAACAAATGTGTCCTATACGAATCCATTCAGTTAACTCGTAACTTAATATATGTTAAATAAATAAATGCTAT 54 10738703 0.760862295 14 53 312 0.987951807 1.612783857 0.048192771 0.37037037 0.590361446 54 0 1 82 2R:10738625-10738736 7 43 205 FBgn0024956 305.3266667 31.30333333 48.17 0.140832769 1.373655628 0.892671787 -8 -8 -8 0.5 dme-miR-283-5p 8mer-m1 TGATATTT 2R 10740761 10740768 - 2R_10740761_10740768_- 0.503243256 0.511785336 0.507514296 0.006040106 CG33144 FBtr0088254|FBtr0302517 10740394|10740052 10740928|10740928 2R - 10740705 10740808 3'utr CG33144 FlyBase G21864.1 AGTTATTACAATTATAATTGTATATGTGTTAACTAAATTGTGATATTTACAGTGATTCGATTTCTAATTGAATCGACAAATTTGTTGAGAACCTATACAAAGAC 118 10740771 0.99070226 17 110 1145 0.946666667 1.45331834 0.573333333 0.220338983 0.386666667 118 4 4 142 2R:10740705-10740808 8 CG33144 FBtr0302517|FBtr0088254 10740052|10740394 10740928|10740928 TGATATTT 8mer-m1 dme-miR-283-5p 2R - 10740732 10740882 3'utr CG33144 FlyBase G16590.1 AGCCTGTAAATGCAGCTGCTGTAATTACTGGTAGTTTCTATTGTTAATGACGACAGCTTACGTACATTTATTTTAGTTATTACAATTATAATTGTATATGTGTTAACTAAATTGTGATATTTACAGTGATTCGATTTCTAATTGAATCGAC 94 10740771 0.990140207 20 90 895 0.950704225 2.130333768 0.521126761 0.361702128 0.577464789 94 7 0 135 2R:10740732-10740882 8 95 206 FBgn0053144 479.6233333 12.36 18.86333333 0.198072098 7.686084142 5.036225482 3 3 3 0.5 dme-miR-34-5p 8mer-A1 CACTGCCA 2R 10982737 10982744 - 2R_10982737_10982744_- 0.669896794 0.670532976 0.670214885 0.000449861 luna FBtr0333066 10977954 10983297 2R - 10982717 10982767 3'utr luna FlyBase G21935.1 TTAATAATAATTTTGTTTTCATACACTGCCAAAATGAAAATGTAAAAAAAG 35 10982747 0.792800699 7 33 279 0.952380952 1.602059991 0.214285714 0.2 0.333333333 35 2 0 40 2R:10982717-10982767 8 luna FBtr0333066 10977954 10983297 CACTGCCA 8mer-A1 dme-miR-34-5p 2R - 10982726 10982762 3'utr luna FlyBase G16633.1 AATAATTTTGTTTTCATACACTGCCAAAATGAAAATG 24 10982747 0.750660855 7 24 161 1 1.505149978 0.5 0.291666667 0.46875 24 0 0 32 2R:10982726-10982762 8 29 207 FBgn0040765 1623.386667 50.45666667 77.46666667 0.017863889 0.574750611 0.374354561 3 3 3 0.5 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 2R 10982848 10982854 - 2R_10982848_10982854_- 0.666173589 0.625341222 0.645757406 0.028872867 luna FBtr0333066|FBtr0088210|FBtr0345675 10977954|10982792|10982792 10983297|10983297|10983297 2R - 10982829 10982879 3'utr luna FlyBase G21936.1 AAACAGCAAAAATTGTGTACAATTTACCAAAGCTAAGCTGATTTCTTTAAT 20 10982855 0.946450111 4 17 119 0.92 1.361727836 0.36 0.2 0.36 20 2 0 23 2R:10982829-10982879 7 luna FBtr0333066|FBtr0088210|FBtr0345675 10977954|10982792|10982792 10983297|10983297|10983297 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 10982834 10982868 3'utr luna FlyBase G16634.1 ATTGTGTACAATTTACCAAAGCTAAGCTGATTTCT 10 10982855 0.676690805 5 9 63 0.923076923 1.079181246 0.538461538 0.3 0.461538462 10 1 0 12 2R:10982834-10982868 7 14.5 208 FBgn0040765 1623.386667 50.45666667 77.46666667 0.008931945 0.287375306 0.187177281 1 1 1 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 11216752 11216757 + 2R_11216752_11216757_+ 0.677366175 0.711375404 0.69437079 0.024048136 shn FBtr0330620|FBtr0330620|FBtr0330620|FBtr0330619|FBtr0330619|FBtr0330619|FBtr0088100|FBtr0088100|FBtr0088100|FBtr0088099|FBtr0088099|FBtr0088099|FBtr0088098|FBtr0088098|FBtr0088098|FBtr0088101|FBtr0088101|FBtr0088101 11216243|11216243|11216243|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213 11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394 2R + 11216657 11216779 3'utr shn FlyBase G14854.2 GCCAACCAACGAGCACACTTATAAATCTATCTATATTGTATACACTTAACCATAATTTGTTTTCGAAATGCATAAATGCAAAAACTCCTGAAGTGCTGTGAGTCTATCTACAAATGTAAAGAT 118 11216750 0.783147818 17 101 729 0.874074074 1.469822016 0.125925926 0.13559322 0.244444444 118 14 3 118 2R:11216657-11216779 6 shn FBtr0088098|FBtr0088098|FBtr0088098|FBtr0088101|FBtr0088101|FBtr0088101|FBtr0088100|FBtr0088100|FBtr0088100|FBtr0088099|FBtr0088099|FBtr0088099|FBtr0330620|FBtr0330620|FBtr0330620|FBtr0330619|FBtr0330619|FBtr0330619 11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216213|11216243|11216243|11216243|11216213|11216213|11216213 11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394|11217394 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 11216665 11216846 3'utr shn FlyBase G11299.2 ACGAGCACACTTATAAATCTATCTATATTGTATACACTTAACCATAATTTGTTTTCGAAATGCATAAATGCAAAAACTCCTGAAGTGCTGTGAGTCTATCTACAAATGTAAAGATCCGAGAGCGAGAGAAGTGTGTTATTTTTAAGGCCTAGCCCCGAAAATGAACCTCCAAACCGAACCAG 98 11216748 0.97152353 23 90 618 0.921052632 1.447158031 0.125 0.387755102 0.605263158 98 8 4 140 2R:11216665-11216846 6 72.5 209 FBgn0003396 1305.2 16.31666667 25.01 0.055547043 4.443309499 2.898840464 2 4 3 0.5 dme-bantam-3p 6mer3-8 TGATCT 2R 11217302 11217307 + 2R_11217302_11217307_+ 0.511744007 0.500292176 0.506018091 0.008097645 shn FBtr0330620|FBtr0330619|FBtr0088100|FBtr0088099|FBtr0088098|FBtr0088101 11216243|11216213|11216213|11216213|11216213|11216213 11217394|11217394|11217394|11217394|11217394|11217394 2R + 11217279 11217329 3'utr shn FlyBase G14859.1 GGTTAAACAACAAGAAAATGAAGTGATCTATTACATTATTGTAAAATATAT 123 11217307 0.973741087 8 122 748 0.987096774 2.184691431 0.006451613 0.203252033 0.367741935 123 2 0 153 2R:11217279-11217329 6 shn FBtr0088098|FBtr0088101|FBtr0088100|FBtr0088099|FBtr0330620|FBtr0330619 11216213|11216213|11216213|11216213|11216243|11216213 11217394|11217394|11217394|11217394|11217394|11217394 TGATCT 6mer3-8 dme-bantam-3p 2R + 11217277 11217332 3'utr shn FlyBase G11305.1 GTGGTTAAACAACAAGAAAATGAAGTGATCTATTACATTATTGTAAAATATATCAA 99 11217297 0.978344205 10 94 629 0.96350365 1.643452676 0.04379562 0.313131313 0.503649635 99 3 2 132 2R:11217277-11217332 6 110.5 210 FBgn0003396 1305.2 16.31666667 25.01 0.084661355 6.772216547 4.418232707 -5 5 0 0.5 dme-miR-252-5p 7mer-m8 GTACTTA 2R 11579041 11579047 - 2R_11579041_11579047_- 0.362741286 0.377028367 0.369884826 0.010102505 tou FBtr0333070|FBtr0113066|FBtr0088091|FBtr0333071 11577483|11578878|11578878|11578878 11579826|11579826|11579826|11579826 2R - 11578989 11579093 3'utr tou FlyBase G22043.1 TTTTAAGCACCAACGAAGCGCTCATTTAAGTTTTAAAGTGTATTTTGTACTTATAGCAACTCCGAAATCTGTATTTAAACGTATTATAACAAGTGCTAACAGTTG 46 11579048 0.98838123 10 42 389 0.918032787 1.447158031 0.131147541 0.260869565 0.442622951 46 4 1 56 2R:11578989-11579093 7 tou FBtr0333071|FBtr0113066|FBtr0088091|FBtr0333070 11578878|11578878|11578878|11577483 11579826|11579826|11579826|11579826 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 11578901 11579281 3'utr tou FlyBase G16721.1 AAGAAGCCATCTACAGTAGACGCCCGGACTGGATGAACGCTGACAAATGACAAATGAACACGTACAAAAACTGTCTACCAATTTCCGATCCGATCGATCGATCCATCGTTTGAACAGTATTTTGTGCACAAAGCCGCGTCGCTTTATTTTCTACACTTACAATTCGAACCCTAATTTTAACAACTATTTTTTAAGCACCAACGAAGCGCTCATTTAAGTTTTAAAGTGTATTTTGTACTTATAGCAACTCCGAAATCTGTATTTAAACGTATTATAACAAGTGCTAACAGTTGCCCAGGCAAAAATGCGAACAATTATACTCAAAAAGGCGGTGCGAGGAGGACTTGTAAATGTAAATGAAAGCAAATTAAAATTAAATGT 124 11579048 0.977775772 39 120 793 0.971590909 2.23299611 0.181818182 0.298387097 0.505681818 124 5 0 171 2R:11578901-11579281 7 24 211 FBgn0033636 2664.063333 30.46 46.92333333 0.009008795 0.787918582 0.511472615 1 1 1 0.5 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 2R 11619646 11619652 - 2R_11619646_11619652_- 0.820020714 0.820136792 0.820078753 8.21E-05 CG9005 FBtr0300945 11619477 11620844 2R - 11619612 11619665 3'utr CG9005 FlyBase G22107.1 ATTTTCCAATTGATACCTGACTATAACTATTGTATAACAACGTACTACACAGCT 12 11619656 0.989233326 7 10 97 0.857142857 1.079181246 0.071428571 0.166666667 0.285714286 12 2 0 12 2R:11619612-11619665 7 CG9005 FBtr0300945 11619477 11620844 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 2R - 11619614 11619665 3'utr CG9005 FlyBase G16756.1 ATTTTCCAATTGATACCTGACTATAACTATTGTATAACAACGTACTACACAG 7 11619655 0.99192614 5 5 46 0.714285714 0.698970004 0.142857143 0 0 7 2 0 5 2R:11619614-11619665 7 7.5 212 FBgn0033638 313.34 6.546666667 10.11333333 0.023935661 1.145621181 0.741595254 4 3 3.5 0.5 dme-bantam-3p 6mer3-8 TGATCT 2R 11977211 11977216 + 2R_11977211_11977216_+ 0.990585026 0.781252788 0.885918907 0.148020218 ADD1 FBtr0088042 11977075 11977721 2R + 11977191 11977234 3'utr ADD1 FlyBase G15024.1 AACATTTTATGTAAATACTTTGATCTGTTTATAGTTTAAACAAT 15 11977210 0.641064807 7 13 167 0.9375 1.176091259 0.0625 0.066666667 0.125 15 1 0 15 2R:11977191-11977234 6 ADD1 FBtr0088042 11977075 11977721 TGATCT 6mer3-8 dme-bantam-3p 2R + 11977199 11977234 3'utr ADD1 FlyBase G11414.1 ATGTAAATACTTTGATCTGTTTATAGTTTAAACAAT 17 11977210 0.712294705 6 16 184 0.931034483 1.431363764 0 0.529411765 0.724137931 17 2 0 27 2R:11977199-11977234 6 15 213 FBgn0026573 1224.666667 33.41666667 51.42333333 0.012248231 0.448877805 0.291696376 1 1 1 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 11977302 11977307 + 2R_11977302_11977307_+ 0.613276478 0.61995285 0.616614664 0.004720857 ADD1 FBtr0088042|FBtr0088042|FBtr0088042 11977075|11977075|11977075 11977721|11977721|11977721 2R + 11977265 11977324 3'utr ADD1 FlyBase G15025.1 GACATTAACACCATTATATTAACTGAATCGCGTATTCCTGTGAATATAAGTCGGGCACGT 28 11977299 0.983292618 9 27 202 0.941176471 1.505149978 0.088235294 0.178571429 0.323529412 28 2 0 32 2R:11977265-11977324 6 ADD1 FBtr0088042|FBtr0088042|FBtr0088042 11977075|11977075|11977075 11977721|11977721|11977721 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 11977284 11977323 3'utr ADD1 FlyBase G11415.1 TAACTGAATCGCGTATTCCTGTGAATATAAGTCGGGCACG 25 11977299 0.699335887 7 23 184 0.95 1.579783597 0.2 0.48 0.675 25 2 0 38 2R:11977284-11977323 6 26 214 FBgn0026573 1224.666667 33.41666667 51.42333333 0.021230267 0.778054863 0.505607053 3 3 3 0.5 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2R 11991313 11991320 + 2R_11991313_11991320_+ 0.61246066 0.613412538 0.612936599 0.000673024 CG8298 FBtr0306003 11991281 11992350 2R + 11991105 11991372 stop_codon CG8298 FlyBase G15033.1 GAAATGCCTGCACTGGAACAACTACGAGACGTACGAGGCTGATATTGAGCTGTTTGCTCAGCGAGAACTTGATCCCAATTTACCTGTAAGGCGTTCCGTACCGGGCAGTATATTCCTGACCACTTCTTTTGCGATGATTATCCTGGCTAACTACTTAAAGTCCAATCCCCTGAAATAGTGGCTGATGTAGGGAAGAACGGCTGCTCTATCTAGTCAACCAAACACGTTCAAATGTGTGCATTAAAATTTATTGTTTAGTTTAGCATAT 178 11991312 0.976302187 34 169 1094 0.941176471 1.806179974 0.132352941 0.106741573 0.220588235 178 10 2 192 2R:11991105-11991372 8 CG8298 FBtr0306003 11991281 11992350 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R + 11991126 11991364 stop_codon CG8298 FlyBase G11420.1 CTACGAGACGTACGAGGCTGATATTGAGCTGTTTGCTCAGCGAGAACTTGATCCCAATTTACCTGTAAGGCGTTCCGTACCGGGCAGTATATTCCTGACCACTTCTTTTGCGATGATTATCCTGGCTAACTACTTAAAGTCCAATCCCCTGAAATAGTGGCTGATGTAGGGAAGAACGGCTGCTCTATCTAGTCAACCAAACACGTTCAAATGTGTGCATTAAAATTTATTGTTTAGTT 126 11991312 0.750569599 34 117 779 0.948598131 2.006466042 0.130841121 0.436507937 0.668224299 126 10 1 203 2R:11991126-11991364 8 48 215 FBgn0033673 177.0033333 9.53 14.54 0.271181334 5.036726128 3.301237964 1 1 1 0.5 dme-miR-14-3p 7mer-A1 AGACTGA 2R 12049766 12049772 + 2R_12049766_12049772_+ 0.570141419 0.578571331 0.574356375 0.005960839 Drep-1 FBtr0330629|FBtr0087978 12049191|12049164 12050172|12050172 2R + 12049691 12049788 3'utr Drep-1 FlyBase G15086.1 GTAGAGTGGAAACGCACATCAAATATTGTTTTTAGACCAATGCCATTGTGAATGTCATTCGTTAAAGGCCAATTGAGACTGACTGAATTTATGTGTAA 137 12049764 0.942985892 7 134 550 0.965517241 2.225309282 0.373563218 0.233576642 0.396551724 137 6 0 168 2R:12049691-12049788 7 Drep-1 FBtr0330629|FBtr0087978 12049191|12049164 12050172|12050172 AGACTGA 7mer-A1 dme-miR-14-3p 2R + 12049743 12049790 3'utr Drep-1 FlyBase G11459.1 TGTCATTCGTTAAAGGCCAATTGAGACTGACTGAATTTATGTGTAATA 98 12049764 0.754699072 4 96 372 0.962264151 1.582631439 0.352201258 0.428571429 0.647798742 98 3 3 153 2R:12049743-12049790 7 116 216 FBgn0024732 75.66666667 4.37 6.78 1.533039648 26.54462243 17.10914454 2 2 2 0.5 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 2R 12177463 12177469 - 2R_12177463_12177469_- 0.75492492 0.743332859 0.74912889 0.008196782 EndoG FBtr0088012 12177428 12177540 2R - 12177449 12177483 3'utr EndoG FlyBase G22363.1 AATTTTCTTCTTTTCCAAAGAACTTGTGGATTAAT 6 12177471 0.892011484 2 6 69 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 2R:12177449-12177483 7 EndoG FBtr0088012 12177428 12177540 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 12177449 12177482 3'utr EndoG FlyBase G16968.1 ATTTTCTTCTTTTCCAAAGAACTTGTGGATTAAT 5 12177472 0.747228632 2 5 60 1 0.698970004 0 0 0 5 0 0 5 2R:12177449-12177482 7 5.5 217 FBgn0033690 109.39 12.2 18.82333333 0.050278819 0.450819672 0.292190544 2 3 2.5 0.5 dme-miR-79-3p 8mer-A1 TAGCTTTA 2R 12182209 12182216 + 2R_12182209_12182216_+ 0.526241585 0.601667915 0.56395475 0.053334448 wash FBtr0339595|FBtr0087989 12182199|12182199 12182373|12182373 2R + 12182165 12182254 stop_codon wash FlyBase G15122.1 GAACACTCCGAGGACGACGAGGATGGGTGGAACTAGTGAATATTTAGCTTTAGTACCGGTTTAAGTGCCTTGGCTGGCTTAAAGCACTAG 24 12182208 0.974772391 7 23 141 1 1.531478917 0.147058824 0.333333333 0.529411765 24 0 0 34 2R:12182165-12182254 8 wash FBtr0339595|FBtr0087989 12182199|12182199 12182373|12182373 TAGCTTTA 8mer-A1 dme-miR-79-3p 2R + 12182164 12182268 stop_codon wash FlyBase G11488.1 CGAACACTCCGAGGACGACGAGGATGGGTGGAACTAGTGAATATTTAGCTTTAGTACCGGTTTAAGTGCCTTGGCTGGCTTAAAGCACTAGCAACCTAGGTTCTC 16 12182208 0.985694226 10 13 114 0.923076923 1.079181246 0.038461538 0.4375 0.653846154 16 1 1 24 2R:12182164-12182268 8 10 218 FBgn0033692 122.6666667 8.66 13.35666667 0.081521739 1.154734411 0.748689793 1 1 1 0.5 dme-miR-308-3p 7mer-m1 TGTGATT 2R 12192420 12192426 - 2R_12192420_12192426_- 0.520220284 0.519976882 0.520098583 0.00017211 CG8858 FBtr0088008 12192372 12192572 2R - 12192373 12192439 3'utr CG8858 FlyBase G22374.1 GATAATTTTCTATTGTGATTCATTGATCCAGGAGTGTAAGGAAACCTTAAATATACTATCATAAATA 14 12192418 0.991198907 6 14 148 1 1.255272505 0.277777778 0.214285714 0.388888889 14 0 0 18 2R:12192373-12192439 7 CG8858 FBtr0088008 12192372 12192572 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 12192412 12192437 3'utr CG8858 FlyBase G16978.1 TAATTTTCTATTGTGATTCATTGATC 7 12192429 0.571277289 4 5 60 0.7 0.84509804 0.1 0.428571429 0.6 7 3 0 7 2R:12192412-12192437 7 9.5 219 FBgn0033698 597.0133333 12.17333333 18.65666667 0.015912542 0.780394304 0.509201358 -8 3 -2.5 0.5 dme-miR-305-3p 7mer-m1 TGTGCCG 2R 12322937 12322943 - 2R_12322937_12322943_- 0.728255566 0.589721363 0.658988465 0.097958472 CG8841 FBtr0087966|FBtr0087964|FBtr0087965 12322505|12322505|12322505 12323316|12323316|12323316 2R - 12322929 12322974 3'utr CG8841 FlyBase G22409.1 GTTTTTGTAATCTGTGACAGAAAATGTTCCTTGTGCCGTATATTTT 30 12322949 0.727617264 4 30 214 1 1.579783597 0.605263158 0.2 0.368421053 30 0 0 38 2R:12322929-12322974 7 CG8841 FBtr0087965|FBtr0087966|FBtr0087964 12322505|12322505|12322505 12323316|12323316|12323316 TGTGCCG 7mer-m1 dme-miR-305-3p 2R - 12322919 12322963 3'utr CG8841 FlyBase G17000.1 CTGTGACAGAAAATGTTCCTTGTGCCGTATATTTTATTGCATGGT 27 12322950 0.976292033 3 27 185 1 1.602059991 0.65 0.37037037 0.575 27 0 0 40 2R:12322919-12322963 7 27.5 220 FBgn0033713 204.63 7.073333333 10.83333333 0.134388897 3.887841659 2.538461538 6 7 6.5 0.5 dme-miR-277-3p 7mer-A1 GCATTTA 2R 12323254 12323260 - 2R_12323254_12323260_- 0.628618415 0.525620451 0.577119433 0.072830514 CG8841 FBtr0087966|FBtr0087964|FBtr0087965 12322505|12322505|12322505 12323316|12323316|12323316 2R - 12323234 12323382 stop_codon CG8841 FlyBase G22411.1 CGCAACGTGGAGCCTGCCATCTGGTACGATACGGAGGTCAAGCTCTTCGAGATTCAGCGCGTCTAGGTCAGTAAGTGGACTCCCAGCTACACCAGCAGCGCAATCGTAGCTTACACGCTTTGGCATTTACTGTAGTTAATTTATTTAGT 43 12323262 0.980589189 10 41 292 0.980392157 1.397940009 0.117647059 0.162790698 0.294117647 43 0 1 50 2R:12323234-12323382 7 CG8841 FBtr0087965|FBtr0087966|FBtr0087964 12322505|12322505|12322505 12323316|12323316|12323316 GCATTTA 7mer-A1 dme-miR-277-3p 2R - 12323240 12323283 3'utr CG8841 FlyBase G17002.1 GCAATCGTAGCTTACACGCTTTGGCATTTACTGTAGTTAATTTA 18 12323262 0.714205808 4 15 135 0.84 0.84509804 0.12 0.277777778 0.48 18 2 2 21 2R:12323240-12323283 7 25 221 FBgn0033713 204.63 7.073333333 10.83333333 0.122171725 3.534401508 2.307692308 2 2 2 0.5 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 12339635 12339642 - 2R_12339635_12339642_- 0.550884741 0.545876883 0.548380812 0.003541049 CG8839 FBtr0087957|FBtr0087959|FBtr0087958|FBtr0087960 12339608|12339608|12339608|12339608 12339892|12339892|12339892|12339892 2R - 12339620 12339719 3'utr CG8839 FlyBase G22424.1 TCGATGTGGATTTATCTATTTTGTATGTGTTTTTAAATGTAATCTAATCATAGATCCGCGCGGATCCGTTCCCGTTTTGCATTTATAATAAATAATTGCA 26 12339643 0.991061188 8 24 260 0.933333333 1.146128036 0.166666667 0.153846154 0.266666667 26 1 1 28 2R:12339620-12339719 8 CG8839 FBtr0087958|FBtr0087960|FBtr0087957|FBtr0087959 12339608|12339608|12339608|12339608 12339892|12339892|12339892|12339892 TGCATTTA 8mer-A1 dme-miR-277-3p 2R - 12339626 12339704 3'utr CG8839 FlyBase G17018.1 CTATTTTGTATGTGTTTTTAAATGTAATCTAATCATAGATCCGCGCGGATCCGTTCCCGTTTTGCATTTATAATAAATA 20 12339643 0.748667447 7 17 180 0.911764706 1.014240439 0.176470588 0.5 0.705882353 20 1 2 31 2R:12339626-12339704 8 13.5 222 FBgn0033717 1014.353333 58.28666667 87.84 0.013308972 0.231613863 0.153688525 1 1 1 0.5 dme-miR-252-5p 7mer-m8 GTACTTA 2R 12425347 12425353 + 2R_12425347_12425353_+ 0.437832532 0.438973118 0.438402825 0.000806526 CG8520 FBtr0303222|FBtr0087926 12425250|12425250 12425459|12425459 2R + 12425333 12425376 3'utr CG8520 FlyBase G15212.1 ATTCACAATATCTTGTACTTACAAATTTCATATCGAAAATGCAA 16 12425346 0.939407031 2 16 150 1 1.342422681 0.045454545 0.25 0.454545455 16 0 0 22 2R:12425333-12425376 7 CG8520 FBtr0303222|FBtr0087926 12425250|12425250 12425459|12425459 GTACTTA 7mer-m8 dme-miR-252-5p 2R + 12425335 12425367 3'utr CG8520 FlyBase G11545.1 TCACAATATCTTGTACTTACAAATTTCATATCG 13 12425346 0.727559962 2 12 101 1 1.255272505 0.111111111 0.230769231 0.444444444 13 0 0 18 2R:12425335-12425367 7 14 223 FBgn0033734 185.89 13.06 20.03333333 0.075313357 1.071975498 0.698835275 1 1 1 0.5 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 12487565 12487572 - 2R_12487565_12487572_- 0.495209622 0.485195874 0.490202748 0.007080755 fdl FBtr0346633 12487449 12488439 2R - 12487555 12487618 3'utr fdl FlyBase G22470.1 TTCAACATTTGGAATGATTGATAGGATCCTTATGCAACTTGTTTTCGTACTTAAGACTTTCAAA 11 12487588 0.669967709 10 11 89 1 1.041392685 0.181818182 0 0 11 0 0 11 2R:12487555-12487618 8 fdl FBtr0346633 12487449 12488439 GTACTTAA 8mer-A1 dme-miR-252-5p 2R - 12487546 12487616 3'utr fdl FlyBase G17050.1 CAACATTTGGAATGATTGATAGGATCCTTATGCAACTTGTTTTCGTACTTAAGACTTTCAAAGAAAATATC 11 12487600 0.98570665 8 10 88 0.928571429 1.113943352 0 0.181818182 0.357142857 11 1 0 13 2R:12487546-12487616 8 3.5 224 FBgn0045063 1364.66 46.87666667 71.74333333 0.002564741 0.074664012 0.048785021 16 28 22 0.5 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2R 12507934 12507940 - 2R_12507934_12507940_- 0.518323538 0.446854737 0.482589137 0.050536073 vis FBtr0087945|FBtr0087945|FBtr0087944|FBtr0087944 12507894|12507894|12507894|12507894 12508268|12508268|12508268|12508268 2R - 12507925 12507954 3'utr vis FlyBase G22491.1 GTGTACACTACTGATACTTAAATAAAACAA 5 12507943 0.798321824 2 5 32 1 0.698970004 0.6 0 0 5 0 0 5 2R:12507925-12507954 7 vis FBtr0087945|FBtr0087945|FBtr0087944|FBtr0087944 12507894|12507894|12507894|12507894 12508268|12508268|12508268|12508268 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2R - 12507928 12507970 3'utr vis FlyBase G17062.1 TTTTAAACTTAACATTGTGTACACTACTGATACTTAAATAAAA 6 12507943 0.982665454 2 5 40 1 1.041392685 0.272727273 0.333333333 0.636363636 6 0 0 11 2R:12507928-12507970 7 4.5 225 FBgn0033748 6.173333333 0.356666667 0.556666667 0.728941685 12.61682243 8.083832335 3 3 3 0.5 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 2R 12511757 12511763 - 2R_12511757_12511763_- 0.74824365 0.515787524 0.632015587 0.164371355 achi FBtr0339635|FBtr0339635|FBtr0087942|FBtr0087942|FBtr0087943|FBtr0087943 12511532|12511532|12511532|12511532|12511532|12511532 12512070|12512070|12512070|12512070|12512070|12512070 2R - 12511728 12511820 3'utr achi FlyBase G22494.1 AACAAATCGACTTAGTTTTGGACCTGACTCTTTTAAACTTAACATGTACACTACTGATACTTAAATAAAACATAAACAAGCATTTGAAATACA 12 12511766 0.985463607 6 12 97 1 1.113943352 0.153846154 0.083333333 0.153846154 12 0 0 13 2R:12511728-12511820 7 achi FBtr0339635|FBtr0339635|FBtr0087942|FBtr0087942|FBtr0087943|FBtr0087943 12511532|12511532|12511532|12511532|12511532|12511532 12512070|12512070|12512070|12512070|12512070|12512070 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 2R - 12511730 12511817 3'utr achi FlyBase G17065.1 AAATCGACTTAGTTTTGGACCTGACTCTTTTAAACTTAACATGTACACTACTGATACTTAAATAAAACATAAACAAGCATTTGAAATA 8 12511766 0.980265247 6 8 60 1 0.954242509 0 0.125 0.222222222 8 0 0 9 2R:12511730-12511817 7 4.5 226 FBgn0033749 292.4933333 16.57 25.38 0.015384966 0.271575136 0.177304965 3 3 3 0.5 dme-miR-308-3p 7mer-m1 TGTGATT 2R 12619174 12619180 + 2R_12619174_12619180_+ 0.486678454 0.519427407 0.50305293 0.023156969 CG45086 FBtr0344532|FBtr0344531 12613656|12613656 12619820|12619820 2R + 12619137 12619195 stop_codon CG45086 FlyBase G15306.1 TTTGGTCTAAACTGGATTTGGATCGAAAAACTATTTTTGTGATTTTTATACAAACACAC 34 12619172 0.865569687 9 33 412 0.976744186 1.62324929 0 0.176470588 0.348837209 34 1 0 42 2R:12619137-12619195 7 CG45086 FBtr0344531|FBtr0344532 12613656|12613656 12619820|12619820 TGTGATT 7mer-m1 dme-miR-308-3p 2R + 12619137 12619189 stop_codon CG45086 FlyBase G11608.1 TTTGGTCTAAACTGGATTTGGATCGAAAAACTATTTTTGTGATTTTTATACAA 18 12619173 0.993389353 5 18 219 1 1.431363764 0 0.388888889 0.592592593 18 0 0 27 2R:12619137-12619189 7 24 227 FBgn0266487 1140.346667 45.66 70.03666667 0.021046232 0.525624179 0.342677645 2 1 1.5 0.5 dme-miR-184-3p 8mer-A1 TCCGTCCA 2R 12621531 12621538 + 2R_12621531_12621538_+ 0.608026841 0.599074814 0.603550828 0.00633002 Galphaq FBtr0304955 12619145 12623197 2R + 12621497 12621551 3'utr Galphaq FlyBase G15313.1 GACATTCACACACTGACATACATATATATAGTTTTCCGTCCAATGAATTGCATCA 41 12621530 0.986135704 6 40 339 0.979591837 1.681241237 0.306122449 0.170731707 0.306122449 41 1 0 48 2R:12621497-12621551 8 Galphaq FBtr0304955 12619145 12623197 TCCGTCCA 8mer-A1 dme-miR-184-3p 2R + 12621511 12621545 3'utr Galphaq FlyBase G11613.1 GACATACATATATATAGTTTTCCGTCCAATGAATT 23 12621530 0.699414063 3 21 186 0.896551724 1.414973348 0.413793103 0.260869565 0.413793103 23 3 0 26 2R:12621511-12621545 8 31.5 228 FBgn0004435 2624.776667 94.95333333 145.51 0.012001021 0.331741908 0.216479967 1 1 1 0.5 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 12640583 12640589 + 2R_12640583_12640589_+ 0.448685004 0.579824237 0.514254621 0.092729418 Iswi FBtr0087843|FBtr0087842|FBtr0087841 12640336|12640336|12640336 12640628|12640628|12640628 2R + 12640538 12640622 3'utr Iswi FlyBase G15352.1 ACATTACTATTGCGTGCCGCTGTATTCTATTCCAAATAATTGTATTGTGTTCTAAGACTATAATCATTATATTTATATAAATCAA 64 12640582 0.719276264 16 63 566 0.973684211 1.86923172 0.118421053 0.1875 0.315789474 64 2 0 74 2R:12640538-12640622 7 Iswi FBtr0087843|FBtr0087842|FBtr0087841 12640336|12640336|12640336 12640628|12640628|12640628 TGTGTTC 7mer-m8 dme-miR-317-3p 2R + 12640504 12640623 3'utr Iswi FlyBase G11640.1 AAGTTTTTTTAAACACCCGCCTACACATCCGACTACATTACTATTGCGTGCCGCTGTATTCTATTCCAAATAATTGTATTGTGTTCTAAGACTATAATCATTATATTTATATAAATCAAC 44 12640582 0.987468251 16 43 378 0.985714286 1.838849091 0.2 0.409090909 0.628571429 44 1 0 69 2R:12640504-12640623 7 27 229 FBgn0011604 1337.66 45.99333333 70.94 0.020184501 0.5870416 0.380603327 1 1 1 0.5 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 12751141 12751148 + 2R_12751141_12751148_+ 0.50688852 0.501572417 0.504230469 0.00375905 CG42663 FBtr0302645|FBtr0302644|FBtr0310576 12750597|12750597|12750597 12751545|12751545|12751545 2R + 12751094 12751199 3'utr CG42663 FlyBase G15387.1 AGCTAATCCGGATTAGTGCTCCTCAGACACAACAGCAGTTGAACATTTGCATTTAAGGGTGAAATATTTCAAAGTGTTTACGATGCAGTATATGATGCATATATAT 91 12751140 0.829062939 8 89 684 0.981481481 2.025305865 0.518518519 0.153846154 0.287037037 91 2 0 106 2R:12751094-12751199 8 CG42663 FBtr0310576|FBtr0302644|FBtr0302645 12750597|12750597|12750597 12751545|12751545|12751545 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 12751094 12751203 3'utr CG42663 FlyBase G11667.1 AGCTAATCCGGATTAGTGCTCCTCAGACACAACAGCAGTTGAACATTTGCATTTAAGGGTGAAATATTTCAAAGTGTTTACGATGCAGTATATGATGCATATATATATAT 63 12751140 0.931687536 7 60 479 0.953488372 1.612783857 0.453488372 0.253968254 0.453488372 63 3 1 82 2R:12751094-12751203 8 58 230 FBgn0261545 747.68 22.44 34.5 0.077573293 2.584670232 1.68115942 1 1 1 0.5 dme-miR-14-3p 6mer3-8 AAGACT 2R 12934462 12934467 - 2R_12934462_12934467_- 0.977621151 0.868859646 0.923240399 0.076906065 CG13322 FBtr0087803|FBtr0087804|FBtr0087805 12934232|12934232|12934232 12934751|12934751|12934751 2R - 12934455 12934507 3'utr CG13322 FlyBase G22669.1 CTGGCCGGAGCAACAACGGACGCATTTGTTTATGTAATTAAAGACTTATCGAC 7 12934459 0.962017095 5 6 33 1 1.041392685 0.090909091 0.428571429 0.636363636 7 0 0 11 2R:12934455-12934507 6 CG13322 FBtr0087805|FBtr0087804|FBtr0087803 12934232|12934232|12934232 12934751|12934751|12934751 AAGACT 6mer3-8 dme-miR-14-3p 2R - 12934445 12934476 3'utr CG13322 FlyBase G17189.1 ATGTAATTAAAGACTTATCGACAAGAATTTTG 11 12934470 0.759583719 6 9 68 0.846153846 0.740362689 0.307692308 0.181818182 0.307692308 11 1 1 11 2R:12934445-12934476 6 7.5 231 FBgn0033784 342.93 20 30.73333333 0.021870353 0.375 0.244034707 -8 3 -2.5 0.5 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 13163173 13163179 + 2R_13163173_13163179_+ 0.571440375 0.515438212 0.543439293 0.039599535 Nrk FBtr0087728 13162649 13163484 2R + 13163157 13163195 3'utr Nrk FlyBase G15512.1 ACGTCTCGTATCCATATCTAGTCTGTAGATTAAGTTTAT 27 13163180 0.728612195 6 22 282 0.84375 0.954242509 0.0625 0.111111111 0.25 27 3 2 27 2R:13163157-13163195 7 Nrk FBtr0087728 13162649 13163484 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 13163158 13163193 3'utr Nrk FlyBase G11768.1 CGTCTCGTATCCATATCTAGTCTGTAGATTAAGTTT 14 13163180 0.724604605 5 14 138 1 1.278753601 0.105263158 0.285714286 0.473684211 14 0 0 19 2R:13163158-13163193 7 20.5 232 FBgn0020391 38.01666667 1.393333333 2.09 0.539237177 14.71291866 9.80861244 -7 -7 -7 0.5 dme-miR-31a-5p 7mer-A1 CTTGCCA 2R 13202654 13202660 + 2R_13202654_13202660_+ 0.593152417 0.560993344 0.57707288 0.022739918 Aats-val FBtr0087735|FBtr0087734|FBtr0333148 13202593|13202593|13202593 13202709|13202709|13202709 2R + 13202631 13202683 3'utr Aats-val FlyBase G15545.1 TAATTGATATTTAGTACGCTTGCCTTGCCAGCTGCTGGGCTTTACTTAAAAAA 16 13202645 0.692754513 9 15 127 0.944444444 1.230448921 0.166666667 0.125 0.222222222 16 1 0 17 2R:13202631-13202683 7 Aats-val FBtr0333148|FBtr0087734|FBtr0087735 13202593|13202593|13202593 13202709|13202709|13202709 CTTGCCA 7mer-A1 dme-miR-31a-5p 2R + 13202629 13202671 3'utr Aats-val FlyBase G11793.1 GGTAATTGATATTTAGTACGCTTGCCTTGCCAGCTGCTGGGCT 8 13202641 0.784879586 6 8 64 1 1.079181246 0.166666667 0.125 0.416666667 8 0 0 12 2R:13202629-13202671 7 11.5 233 FBgn0027079 605.9033333 21.83 33.28 0.018979925 0.526797984 0.345552885 9 13 11 0.5 dme-miR-308-3p 7mer-m1 TGTGATT 2R 13408076 13408082 - 2R_13408076_13408082_- 0.430208691 0.33242774 0.381318215 0.069141608 CG18278 FBtr0087716 13408040 13408169 2R - 13408055 13408134 3'utr CG18278 FlyBase G22804.1 AAAACCAAATTCAAGTCCGCTGGGCGCATATAGATTTCATATTCAGATATCATGTGATTTATGTTGCTATATACATAGTC 31 13408076 0.916453104 13 31 283 1 1.602059991 0.075 0.225806452 0.4 31 0 0 40 2R:13408055-13408134 7 CG18278 FBtr0087716 13408040 13408169 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 13408063 13408097 3'utr CG18278 FlyBase G17296.1 CATATTCAGATATCATGTGATTTATGTTGCTATAT 12 13408076 0.64236075 6 11 115 0.95 1.278753601 0.05 0.5 0.7 12 1 0 19 2R:13408063-13408097 7 18 234 FBgn0033836 254.63 18.40666667 28.13666667 0.070690806 0.977906556 0.639734629 -6 -6 -6 0.5 dme-miR-980-3p 6mer3-8 GGCAGC 2R 13496891 13496896 - 2R_13496891_13496896_- 0.973250834 0.987038118 0.980144476 0.009749093 drk FBtr0087695|FBtr0087696|FBtr0087697|FBtr0087694|FBtr0087698 13496439|13495220|13495220|13496764|13495220 13496977|13496977|13496977|13496977|13496977 2R - 13496866 13496923 3'utr drk FlyBase G22889.1 AAACACAACACACACCCATAACGATTAGGCAGCATTATCAGCAATTGCGAATAACAAC 40 13496898 0.946402215 7 38 166 0.955555556 1.633468456 0.022222222 0.1 0.2 40 2 0 43 2R:13496866-13496923 6 drk FBtr0087694|FBtr0087698|FBtr0087696|FBtr0087697|FBtr0087695 13496764|13495220|13495220|13495220|13496439 13496977|13496977|13496977|13496977|13496977 GGCAGC 6mer3-8 dme-miR-980-3p 2R - 13496868 13496919 3'utr drk FlyBase G17366.1 ACAACACACACCCATAACGATTAGGCAGCATTATCAGCAATTGCGAATAACA 27 13496898 0.941129823 6 27 127 1 1.662757832 0.065217391 0.555555556 0.739130435 27 0 0 46 2R:13496868-13496919 6 29.5 235 FBgn0004638 2373.316667 149.8733333 229.7333333 0.012429863 0.196832881 0.12840975 2 2 2 0.5 dme-miR-932-5p 7mer-A1 GAATTGA 2R 13820064 13820070 - 2R_13820064_13820070_- 0.543738986 0.675356511 0.609547748 0.093067627 fl(2)d FBtr0304697|FBtr0304696|FBtr0087647|FBtr0087648 13819622|13819622|13819622|13819622 13820154|13820154|13820154|13820154 2R - 13820002 13820184 stop_codon fl(2)d FlyBase G22925.1 GGCAGCGGAGCAGTCGACTACTCCACCTAAGCGCTGGCGAACCTTTTTCCAAAAAAGGGTGCACTCCATATGAGTTCGTCAAATTGATCGTTAATTCCTGACGTTTACTTTTGTGAATTGAGATTTCAAAACAGAGAGAGACTTCATTTTATATTTCTAACCTATCTTTTAGATTCTTTAATT 65 13820067 0.982831166 25 62 470 0.95 1.579783597 0.325 0.215384615 0.3625 65 3 1 76 2R:13820002-13820184 7 fl(2)d FBtr0087647|FBtr0087648|FBtr0304697|FBtr0304696 13819622|13819622|13819622|13819622 13820154|13820154|13820154|13820154 GAATTGA 7mer-A1 dme-miR-932-5p 2R - 13820010 13820174 stop_codon fl(2)d FlyBase G17396.1 CAGTCGACTACTCCACCTAAGCGCTGGCGAACCTTTTTCCAAAAAAGGGTGCACTCCATATGAGTTCGTCAAATTGATCGTTAATTCCTGACGTTTACTTTTGTGAATTGAGATTTCAAAACAGAGAGAGACTTCATTTTATATTTCTAACCTATCTTTTAGATT 58 13820067 0.986484706 21 56 478 0.97826087 1.954242509 0.239130435 0.448275862 0.652173913 58 2 0 90 2R:13820010-13820174 7 29 236 FBgn0000662 1153.03 55.06666667 84.32666667 0.025151124 0.526634383 0.343900704 -3 -3 -3 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 2R 13863458 13863463 + 2R_13863458_13863463_+ 0.753233369 0.459327124 0.606280247 0.207823138 CG13344 FBtr0087586|FBtr0087586|FBtr0087586|FBtr0339953|FBtr0339953|FBtr0339953 13863344|13863344|13863344|13863344|13863344|13863344 13864156|13864156|13864156|13863579|13863579|13863579 2R + 13863433 13863491 3'utr CG13344 FlyBase G15662.1 AGGTTTAGTTTTATGAGGCGCACTTCTGTGACTTTGTTTGTGTTCGTACGTTCGTATAT 54 13863467 0.814667431 10 53 463 0.984375 1.799340549 0.3125 0.166666667 0.296875 54 1 0 63 2R:13863433-13863491 6 CG13344 FBtr0339953|FBtr0339953|FBtr0339953|FBtr0087586|FBtr0087586|FBtr0087586 13863344|13863344|13863344|13863344|13863344|13863344 13863579|13863579|13863579|13864156|13864156|13864156 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 13863439 13863489 3'utr CG13344 FlyBase G11878.1 AGTTTTATGAGGCGCACTTCTGTGACTTTGTTTGTGTTCGTACGTTCGTAT 37 13863467 0.615195605 9 33 319 0.886792453 1.194976603 0.339622642 0.378378378 0.566037736 37 4 2 47 2R:13863439-13863489 6 26 237 FBgn0033884 128.6733333 8.203333333 12.55333333 0.202062069 3.169443316 2.071163038 -9 -9 -9 0.5 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 13863471 13863477 + 2R_13863471_13863477_+ 0.485633931 0.447359276 0.466496603 0.027064229 CG13344 FBtr0087586|FBtr0339953 13863344|13863344 13864156|13863579 2R + 13863433 13863491 3'utr CG13344 FlyBase G15662.1 AGGTTTAGTTTTATGAGGCGCACTTCTGTGACTTTGTTTGTGTTCGTACGTTCGTATAT 54 13863467 0.814667431 10 53 463 0.984375 1.799340549 0.3125 0.166666667 0.296875 54 1 0 63 2R:13863433-13863491 7 CG13344 FBtr0339953|FBtr0087586 13863344|13863344 13863579|13864156 TGTGTTC 7mer-m8 dme-miR-317-3p 2R + 13863439 13863489 3'utr CG13344 FlyBase G11878.1 AGTTTTATGAGGCGCACTTCTGTGACTTTGTTTGTGTTCGTACGTTCGTAT 37 13863467 0.615195605 9 33 319 0.886792453 1.194976603 0.339622642 0.378378378 0.566037736 37 4 2 47 2R:13863439-13863489 7 4 238 FBgn0033884 128.6733333 8.203333333 12.55333333 0.031086472 0.487606664 0.318640467 4 4 4 0.5 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2R 13863903 13863910 + 2R_13863903_13863910_+ 0.462835825 0.471228461 0.467032143 0.005934535 CG13344 FBtr0087586 13863344 13864156 2R + 13863815 13863940 3'utr CG13344 FlyBase G15665.1 AACCCCCTCTGGCAGCCCATAGCACAAAGAAACGTATGAACCCAGCTTGTACTTGAGTTAGTTGGATGATTAAAGTTGAAGCGGCATTTCTAGTCAGTAAATGGTGGTCAGAATAGAGGGAACGTA 137 13863902 0.977503484 11 134 886 0.9625 2.187520721 0.0875 0.145985401 0.26875 137 6 0 154 2R:13863815-13863940 8 CG13344 FBtr0087586 13863344 13864156 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R + 13863886 13863980 3'utr CG13344 FlyBase G11881.1 AAAGTTGAAGCGGCATTTCTAGTCAGTAAATGGTGGTCAGAATAGAGGGAACGTAGAAGGAGGAGGAGGAGGAGGAGTAACCCCGATACAGGGCA 70 13863902 0.972006182 8 66 393 0.97 1.685741739 0.2 0.371428571 0.56 70 2 1 97 2R:13863886-13863980 8 97 239 FBgn0033884 128.6733333 8.203333333 12.55333333 0.753846951 11.8244616 7.727031333 1 1 1 0.5 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 13944733 13944739 - 2R_13944733_13944739_- 0.631015908 0.70210563 0.666560769 0.050268009 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 2R - 13944714 13944832 3'utr AGO1 FlyBase G23027.1 TATGTTCTGCTCAGAGGCAAGGCCCAAATAAAAAGACAAAAAGCCGGGATATCCAAATGGGAACTTACATTTTTATCTGTCAAAATTCAATTGAGCTTTAAACTAAAGATAGATCGAGA 158 13944741 0.976271152 12 150 963 0.945054945 2.235528447 0.027472527 0.120253165 0.236263736 158 10 0 172 2R:13944714-13944832 7 AGO1 FBtr0087612|FBtr0305592 13943745|13943385 13947971|13947971 AGCTTTA 7mer-A1 dme-miR-79-3p 2R - 13944708 13944758 3'utr AGO1 FlyBase G17454.1 ATCTGTCAAAATTCAATTGAGCTTTAAACTAAAGATAGATCGAGAAAAAAC 52 13944741 0.805553155 3 49 371 0.927536232 1.806179974 0 0.288461538 0.463768116 52 5 0 64 2R:13944708-13944758 7 79.5 240 FBgn0262739 6339.806667 111.4333333 171.8633333 0.012539815 0.71343105 0.462576854 2 2 2 0.5 dme-miR-1003-3p 7mer-m8 ATGTGAG 2R 13946084 13946090 - 2R_13946084_13946090_- 0.606907735 0.559769654 0.583338694 0.033331599 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 2R - 13945974 13946162 3'utr AGO1 FlyBase G23034.1 CATCCTTCTTCACAGAACCTTTAATTTAGATTTAGTTTCCAAGTTTGCAAGCTGTTTTGCCAATCGTACATTATGTGAGCATTATAAAATACATAATATATATAAATCTATATGCTTATATTTAATCATTTACTGCACTTACAAATTAGTTGGTAATCCTCAAGAATATATGTATAAAGAAAAAAAGGG 88 13946090 0.940822388 37 76 698 0.900990099 1.356981401 0.108910891 0.125 0.237623762 88 7 3 91 2R:13945974-13946162 7 AGO1 FBtr0087612|FBtr0305592|FBtr0087614 13943745|13943385|13945407 13947971|13947971|13947971 ATGTGAG 7mer-m8 dme-miR-1003-3p 2R - 13945981 13946170 3'utr AGO1 FlyBase G17459.1 ATTGTATACATCCTTCTTCACAGAACCTTTAATTTAGATTTAGTTTCCAAGTTTGCAAGCTGTTTTGCCAATCGTACATTATGTGAGCATTATAAAATACATAATATATATAAATCTATATGCTTATATTTAATCATTTACTGCACTTACAAATTAGTTGGTAATCCTCAAGAATATATGTATAAAGAAA 62 13946106 0.984202686 24 56 504 0.904255319 1.452297671 0.042553191 0.338709677 0.563829787 62 7 2 85 2R:13945981-13946170 7 19 241 FBgn0262739 6339.806667 111.4333333 171.8633333 0.002996937 0.170505534 0.110552959 0 16 8 0.5 dme-miR-33-5p 7mer-A1 AATGCAA 2R 13985083 13985089 - 2R_13985083_13985089_- 0.641144022 0.722965425 0.682054724 0.057856467 RN-tre FBtr0087603|FBtr0330626|FBtr0330627 13984813|13984813|13984813 13985779|13985779|13985596 2R - 13985051 13985134 3'utr RN-tre FlyBase G23115.1 GTACCAAACAAAATACAAAGCAACGTTAAAAAGTTACGTCCATGAAATGCAAACGAATGTAAAGGCGAAAGGCAACCAAATATT 45 13985101 0.960432982 8 42 207 0.941176471 1.681241237 0.176470588 0.133333333 0.235294118 45 3 0 48 2R:13985051-13985134 7 RN-tre FBtr0330626|FBtr0330627|FBtr0087603 13984813|13984813|13984813 13985779|13985596|13985779 AATGCAA 7mer-A1 dme-miR-33-5p 2R - 13985031 13985121 3'utr RN-tre FlyBase G17524.1 TACAAAGCAACGTTAAAAAGTTACGTCCATGAAATGCAAACGAATGTAAAGGCGAAAGGCAACCAAATATTAATTGAAAACTATAGATAAC 35 13985101 0.957442506 7 35 166 1 1.748188027 0.25 0.514285714 0.696428571 35 0 0 56 2R:13985031-13985121 7 29 242 FBgn0020620 1475.656667 67.63 103.75 0.019652268 0.428803785 0.279518072 12 12 12 0.5 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 14058480 14058487 + 2R_14058480_14058487_+ 0.403159473 0.405964687 0.40456208 0.001983576 mam FBtr0339956|FBtr0087597|FBtr0087596 14057913|14057913|14057913 14060356|14060356|14058697 2R + 14058442 14058492 3'utr mam FlyBase G15706.1 TACAGATACTACAGACTCGTTGTGCAACTTAAGCACTTGTACTTAATGCAA 12 14058479 0.982339257 4 12 91 1 1.079181246 0.083333333 0 0 12 0 0 12 2R:14058442-14058492 8 mam FBtr0087596|FBtr0339956|FBtr0087597 14057913|14057913|14057913 14058697|14060356|14060356 GTACTTAA 8mer-A1 dme-miR-252-5p 2R + 14058442 14058492 3'utr mam FlyBase G11914.1 TACAGATACTACAGACTCGTTGTGCAACTTAAGCACTTGTACTTAATGCAA 7 14058479 0.980313255 3 7 52 1 1 0 0.285714286 0.5 7 0 0 10 2R:14058442-14058492 8 8 243 FBgn0002643 1627.19 27.33666667 41.79333333 0.004916451 0.292647238 0.191418089 1 1 1 0.5 dme-miR-33-5p 7mer-A1 AATGCAA 2R 14060560 14060566 - 2R_14060560_14060566_- 0.451194415 0.658782198 0.554988306 0.146786741 Prosap FBtr0339764 14060454 14062325 2R - 14060499 14060593 3'utr Prosap FlyBase G23139.1 AGCACACACCACCACACATACACTTTAAATGCAAGTATTTCAAATGGAATAATACGGAAATATATATCATAAGTCGTAAAATATGCAATTATGTA 11 14060575 0.974862043 8 11 61 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 2R:14060499-14060593 7 Prosap FBtr0339764 14060454 14062325 AATGCAA 7mer-A1 dme-miR-33-5p 2R - 14060535 14060578 3'utr Prosap FlyBase G17542.1 ACATACACTTTAAATGCAAGTATTTCAAATGGAATAATACGGAA 5 14060568 0.966030999 3 5 27 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2R:14060535-14060578 7 4.5 244 FBgn0040752 4396.62 61.27 94.33 0.001023514 0.073445406 0.047704866 9 2 5.5 0.5 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 14166705 14166712 + 2R_14166705_14166712_+ 0.540791021 0.528392651 0.534591836 0.008766922 CG8323 FBtr0087521 14166669 14166991 2R + 14166653 14166715 stop_codon CG8323 FlyBase G15738.1 AAGTATAGTAATCAATGACCCCAAAGATCACTGGCTAGGTAGCATTAATTTAAGTACAAAATT 5 14166702 0.987759734 4 5 34 1 0.77815125 0 0.2 0.333333333 5 0 0 6 2R:14166653-14166715 8 CG8323 FBtr0087521 14166669 14166991 AGTACAAA 8mer-A1 dme-miR-305-5p 2R + 14166675 14166718 3'utr CG8323 FlyBase G11935.1 AAAGATCACTGGCTAGGTAGCATTAATTTAAGTACAAAATTGTT 6 14166702 0.984168723 3 6 53 1 0.954242509 0 0.5 0.666666667 6 0 0 9 2R:14166675-14166718 8 4 245 FBgn0033903 176.6666667 14.75333333 22.46333333 0.022641509 0.271125169 0.178067963 3 3 3 0.5 dme-miR-184-5p 7mer-A1 GATAAGA 2R 14229765 14229771 + 2R_14229765_14229771_+ 0.774449541 0.757953925 0.766201733 0.011664151 CG8468 FBtr0087533|FBtr0087534|FBtr0087532 14229566|14229566|14229566 14230620|14230620|14230620 2R + 14229632 14229825 3'utr CG8468 FlyBase G15803.1 AGCCACAACTATCTTCGATAGCACCTTTCGGTATTGGCAACATTAATTGACAATCACTCATCCTGTCGAAGGAACTCCCGATTTCGGAGGGAAGCGAGTGCGAAAGCGTGTTCCGAGTACTTAATACAATTAAGATAAGACTAATCGTAATGTTGTGCCTTCAGCGATATCGAGTGCCTACCACACACACCCCT 75 14229756 0.974011666 26 69 438 0.892857143 1.875061263 0.273809524 0.106666667 0.202380952 75 9 0 75 2R:14229632-14229825 7 CG8468 FBtr0087532|FBtr0087533|FBtr0087534 14229566|14229566|14229566 14230620|14230620|14230620 GATAAGA 7mer-A1 dme-miR-184-5p 2R + 14229724 14229822 3'utr CG8468 FlyBase G11990.2 AGCGAGTGCGAAAGCGTGTTCCGAGTACTTAATACAATTAAGATAAGACTAATCGTAATGTTGTGCCTTCAGCGATATCGAGTGCCTACCACACACACC 36 14229756 0.954831493 14 33 219 0.918367347 1.653212514 0.102040816 0.305555556 0.489795918 36 4 0 45 2R:14229724-14229822 7 17 246 FBgn0033913 3375.036667 105.6 161.63 0.005036982 0.160984848 0.105178494 9 9 9 0.5 dme-miR-14-3p 8mer-A1 AAGACTGA 2R 14357959 14357966 - 2R_14357959_14357966_- 0.640206123 0.642386274 0.641296199 0.001541634 Arc1 FBtr0087560 14357925 14359435 2R - 14357950 14358001 3'utr Arc1 FlyBase G23277.1 CGTGGAACTGCTAAAAATATAAAACTGTAAAACTAAAGACTGAAACTAGAAA 252 14357968 0.765409429 9 222 851 0.886363636 1.290034611 0.090909091 0.174603175 0.324675325 252 22 13 273 2R:14357950-14358001 8 Arc1 FBtr0087560 14357925 14359435 AAGACTGA 8mer-A1 dme-miR-14-3p 2R - 14357950 14358031 3'utr Arc1 FlyBase G17650.1 TGGGGGCCTATGGAAGACCACAAGTGGTTGCGTGGAACTGCTAAAAATATAAAACTGTAAAACTAAAGACTGAAACTAGAAA 228 14357968 0.742143498 13 192 822 0.852090032 1.043034632 0.118971061 0.285087719 0.475884244 228 23 23 265 2R:14357950-14358031 8 219 247 FBgn0033926 17202.14 891.9533333 1379.15 0.012730974 0.24552854 0.15879346 2 2 2 0.5 dme-miR-13b-2-5p 8mer-m1 TTTGACGC 2R 14584400 14584407 + 2R_14584400_14584407_+ 0.616790625 0.616981104 0.616885864 0.000134704 ttv FBtr0087495|FBtr0333165|FBtr0333164 14584225|14584225|14584225 14585321|14585321|14587917 2R + 14584378 14584427 3'utr ttv FlyBase G15922.1 ATGTTTAGATGAAATGCTGTTTTTTGACGCTGGCCAAGCGATGCAAGAAC 12 14584401 0.727431545 6 11 89 0.933333333 1.146128036 0.4 0.166666667 0.333333333 12 1 0 14 2R:14584378-14584427 8 ttv FBtr0333164|FBtr0087495|FBtr0333165 14584225|14584225|14584225 14587917|14585321|14585321 TTTGACGC 8mer-m1 dme-miR-13b-2-5p 2R + 14584380 14584431 3'utr ttv FlyBase G12093.1 GTTTAGATGAAATGCTGTTTTTTGACGCTGGCCAAGCGATGCAAGAACTATG 12 14584392 0.974310119 6 12 89 1 1.255272505 0.611111111 0.25 0.5 12 0 0 18 2R:14584380-14584431 8 11.5 248 FBgn0265974 763.1366667 22.67 34.72 0.015069385 0.507278341 0.331221198 -1 8 3.5 0.5 dme-miR-980-3p 7mer-A1 GCAGCTA 2R 14760435 14760441 - 2R_14760435_14760441_- 0.766885793 0.762604939 0.764745366 0.003027053 Spred FBtr0329880 14759644 14761759 2R - 14760416 14760470 3'utr Spred FlyBase G23385.1 GTTTTCAAAAAGTCAACAAACTCATATATGCAGCTATATATATATATAAAAATAA 62 14760443 0.846923084 4 58 513 0.943661972 1.826074803 0.028169014 0.080645161 0.197183099 62 4 0 67 2R:14760416-14760470 7 Spred FBtr0329880 14759644 14761759 GCAGCTA 7mer-A1 dme-miR-980-3p 2R - 14760415 14760464 3'utr Spred FlyBase G17721.1 AAAAAGTCAACAAACTCATATATGCAGCTATATATATATATAAAAATAAT 31 14760443 0.827300942 3 30 258 0.954545455 1.62324929 0 0.322580645 0.522727273 31 2 0 42 2R:14760415-14760464 7 46.5 249 FBgn0020767 764.69 30.76 47.25 0.060808955 1.511703511 0.984126984 2 2 2 0.5 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2R 14857343 14857350 + 2R_14857343_14857350_+ 0.597478045 0.588898156 0.5931881 0.006066835 HPS1 FBtr0087449 14857301 14857502 2R + 14857330 14857369 3'utr HPS1 FlyBase G15977.1 TTATAACATGATTTCTAGTCAATTTTCGAGACTCCTAGGC 66 14857342 0.719346163 5 64 592 0.988095238 1.919078092 0 0.196969697 0.369047619 66 1 0 83 2R:14857330-14857369 8 HPS1 FBtr0087449 14857301 14857502 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R + 14857330 14857372 3'utr HPS1 FlyBase G12133.1 TTATAACATGATTTCTAGTCAATTTTCGAGACTCCTAGGCGAG 50 14857342 0.73809567 6 48 461 0.985915493 1.84509804 0.056338028 0.32 0.521126761 50 1 0 70 2R:14857330-14857372 8 57 250 FBgn0033973 78.66666667 4.6 7.043333333 0.724576271 12.39130435 8.09275911 1 1 1 0.5 dme-miR-305-5p 8mer-m1 AGTACAAT 2R 14867254 14867261 - 2R_14867254_14867261_- 0.276257248 0.251440449 0.263848848 0.017548128 Inr-a FBtr0301513 14866611 14867304 2R - 14867175 14867375 stop_codon Inr-a FlyBase G23450.1 TCAACCAGAATGGCGGCACTCGATGGCTTAGGTTGGTGGAAGGGCGGGTTATTGGGACCGTATGTGGTTGACAAGTGGAAATCTTCTGCTCAACTCTAACCGAAGTCTGTGATAAGTACAATTGTGATACCAAAGTGGCGTTCCCAACAATGGAATGTGTTAAACTATAGATTTTGCTTGAATTCTGATAAATATCATATT 139 14867270 0.979531721 25 131 906 0.955307263 1.630936119 0.094972067 0.223021583 0.396648045 139 5 3 171 2R:14867175-14867375 8 Inr-a FBtr0301513 14866611 14867304 AGTACAAT 8mer-m1 dme-miR-305-5p 2R - 14867196 14867324 stop_codon Inr-a FlyBase G17767.1 TTGGGACCGTATGTGGTTGACAAGTGGAAATCTTCTGCTCAACTCTAACCGAAGTCTGTGATAAGTACAATTGTGATACCAAAGTGGCGTTCCCAACAATGGAATGTGTTAAACTATAGATTTTGCTTG 110 14867270 0.85805092 18 98 710 0.887573964 1.477121255 0.147928994 0.409090909 0.615384615 110 15 4 150 2R:14867196-14867324 8 100 251 FBgn0264962 1522.043333 60.58 92.41666667 0.065701152 1.650709805 1.082055906 9 9 9 0.5 dme-miR-33-5p 8mer-A1 CAATGCAA 2R 14945723 14945730 - 2R_14945723_14945730_- 0.473244089 0.409769923 0.441507006 0.044883037 aPKC FBtr0329887|FBtr0329890|FBtr0303431|FBtr0329888|FBtr0303433|FBtr0329889 14945112|14945112|14945112|14945112|14945112|14945112 14946515|14946046|14946515|14946515|14946515|14946063 2R - 14945681 14945745 3'utr aPKC FlyBase G23485.1 AACCATTTCAAAACTCAATGCAAGACTTTTCACCAAGAAACTTAGGGGTTTGACGATCCCGCGAG 42 14945717 0.97226582 5 39 232 0.941176471 1.681241237 0.019607843 0.119047619 0.274509804 42 3 0 48 2R:14945681-14945745 8 aPKC FBtr0329890|FBtr0303431|FBtr0303433|FBtr0329888|FBtr0329889|FBtr0329887 14945112|14945112|14945112|14945112|14945112|14945112 14946046|14946515|14946515|14946515|14946063|14946515 CAATGCAA 8mer-A1 dme-miR-33-5p 2R - 14945703 14945772 3'utr aPKC FlyBase G17796.1 AGGCGAACTTTATGCAAGCAAAAGATAAACCATTTCAAAACTCAATGCAAGACTTTTCACCAAGAAACTT 35 14945717 0.885558642 6 34 172 0.979591837 1.681241237 0.040816327 0.285714286 0.489795918 35 1 0 48 2R:14945703-14945772 8 35 252 FBgn0261854 1305.743333 49.00666667 75.25333333 0.026804655 0.714188546 0.465095677 -13 -13 -13 0.5 dme-miR-252-5p 7mer-m8 GTACTTA 2R 15262867 15262873 - 2R_15262867_15262873_- 0.46864266 0.584173472 0.526408066 0.081692612 Trpm FBtr0339080|FBtr0339082|FBtr0339077|FBtr0339079|FBtr0339074|FBtr0339081|FBtr0339078|FBtr0339076 15262806|15262806|15262806|15262806|15262806|15262806|15262806|15262806 15263722|15263722|15263722|15263722|15263722|15263722|15263722|15263722 2R - 15262850 15262977 3'utr Trpm FlyBase G23564.1 AAATTGTTCATGTTTGGCCAATGTGTGCTAGTAACTTAAATTAGATTTTTAAATATTTTCAAGGATTAAGAATAACAATGCATTTTAATAAAATATTTATGATTGTACTTATTTATGTTAAGAATTGT 61 15262874 0.89564363 13 58 592 0.945205479 1.537819095 0.068493151 0.180327869 0.315068493 61 3 1 69 2R:15262850-15262977 7 Trpm FBtr0339074|FBtr0339081|FBtr0339078|FBtr0339076|FBtr0339080|FBtr0339077|FBtr0339082|FBtr0339079 15262806|15262806|15262806|15262806|15262806|15262806|15262806|15262806 15263722|15263722|15263722|15263722|15263722|15263722|15263722|15263722 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 15262852 15262915 3'utr Trpm FlyBase G17844.1 GGATTAAGAATAACAATGCATTTTAATAAAATATTTATGATTGTACTTATTTATGTTAAGAATT 26 15262874 0.798963332 8 26 242 1 1.591064607 0.128205128 0.461538462 0.641025641 26 0 0 39 2R:15262852-15262915 7 17 253 FBgn0265194 654.6833333 11.36 17.34333333 0.025966752 1.496478873 0.980203729 1 1 1 0.5 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 15318102 15318108 - 2R_15318102_15318108_- 0.576658982 0.572850689 0.574754835 0.002692875 CG8155 FBtr0087391 15317815 15318579 2R - 15318058 15318170 3'utr CG8155 FlyBase G23588.1 TTTATCTGCACCTTTGCCAAACGATCAAATGCGAGCTGTTTGGCTGGAAATTGCTTTATTTCTCTAGTCTGCTAATGCATTCCATGCTGTTGTAAAAACTATATTTTAGATTT 100 15318101 0.797159459 17 92 965 0.911290323 2.053078443 0.274193548 0.19 0.346774194 100 11 0 113 2R:15318058-15318170 7 CG8155 FBtr0087391 15317815 15318579 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R - 15318042 15318167 3'utr CG8155 FlyBase G17862.1 ATCTGCACCTTTGCCAAACGATCAAATGCGAGCTGTTTGGCTGGAAATTGCTTTATTTCTCTAGTCTGCTAATGCATTCCATGCTGTTGTAAAAACTATATTTTAGATTTAAAATCGCGCCTAAAT 64 15318101 0.989255874 17 62 594 0.978723404 1.963787827 0.308510638 0.359375 0.563829787 64 2 0 92 2R:15318042-15318167 7 49.5 254 FBgn0034009 669.7533333 19.16666667 29.26666667 0.073907807 2.582608696 1.691343964 -7 -7 -7 0.5 dme-miR-8-3p 6mer3-8 CAGTAT 2R 15387745 15387750 + 2R_15387745_15387750_+ 0.956803061 0.920664334 0.938733697 0.025553991 SRPK FBtr0087385|FBtr0087384 15385390|15385390 15387851|15387851 2R + 15387718 15387774 3'utr SRPK FlyBase G16131.1 AGGAACCCAGCTGCCGAATTGCAATTCCAGTATGTTCTCACGCTTTCAAAGAGTATA 12 15387750 0.987288356 8 11 94 0.923076923 0.77815125 0.153846154 0.083333333 0.153846154 12 0 1 12 2R:15387718-15387774 6 SRPK FBtr0087385|FBtr0087384 15385390|15385390 15387851|15387851 CAGTAT 6mer3-8 dme-miR-8-3p 2R + 15387726 15387775 3'utr SRPK FlyBase G12237.1 AGCTGCCGAATTGCAATTCCAGTATGTTCTCACGCTTTCAAAGAGTATAA 7 15387743 0.977105951 6 7 61 1 1.041392685 0.181818182 0.428571429 0.636363636 7 0 0 11 2R:15387726-15387775 6 9 255 FBgn0026370 1940.296667 50.52 77.84666667 0.004638466 0.178147268 0.115611887 -5 2 -1.5 0.5 dme-miR-11-3p 7mer-m1 TGTGATG 2R 15517768 15517774 - 2R_15517768_15517774_- 0.52519981 0.532971407 0.529085608 0.005495351 Khc-73 FBtr0329957|FBtr0087357|FBtr0329956|FBtr0329955|FBtr0346265 15517705|15517705|15515776|15517705|15517705 15518577|15518751|15518751|15518751|15518751 2R - 15517747 15517797 3'utr Khc-73 FlyBase G23622.1 ATGTGTAAATTGTATTATTTTGATGTGATGTATTTATAATTTCCCTTTATA 55 15517779 0.662314028 12 50 715 0.904761905 1.755874856 0.222222222 0.145454545 0.253968254 55 6 0 57 2R:15517747-15517797 7 Khc-73 FBtr0329955|FBtr0346265|FBtr0087357|FBtr0329956|FBtr0329957 15517705|15517705|15517705|15515776|15517705 15518751|15518751|15518751|15518751|15518577 TGTGATG 7mer-m1 dme-miR-11-3p 2R - 15517754 15517813 3'utr Khc-73 FlyBase G17883.1 CGCACCGTCGCAGTTAATGTGTAAATTGTATTATTTTGATGTGATGTATTTATAATTTCC 46 15517778 0.619482257 9 42 572 0.920634921 1.286306739 0.174603175 0.282608696 0.476190476 46 3 2 58 2R:15517754-15517813 7 46.5 256 FBgn0019968 1323.716667 22.35333333 34.32 0.035128363 2.080226663 1.354895105 5 4 4.5 0.5 dme-miR-1007-3p 8mer-A1 TGAGCTTA 2R 15518060 15518067 - 2R_15518060_15518067_- 0.566979759 0.543951682 0.55546572 0.016283326 Khc-73 FBtr0329957|FBtr0087357|FBtr0329956|FBtr0329955|FBtr0346265 15517705|15517705|15515776|15517705|15517705 15518577|15518751|15518751|15518751|15518751 2R - 15518019 15518168 3'utr Khc-73 FlyBase G23624.1 TTCGATTTTGGAATGAAGCGTTTTACTGATATATTTTCTAATGGTTCTTTGCCTTTAGTTTAGTTAAATTGTTTTTGATATCAATGTGACTTGTTTAACGATGAGCTTATATTTTTACTTGTTATTGACTATATTCAATATATTTGTATA 70 15518067 0.993028279 21 65 770 0.93902439 1.886490725 0.243902439 0.1 0.231707317 70 5 0 77 2R:15518019-15518168 8 Khc-73 FBtr0329955|FBtr0346265|FBtr0087357|FBtr0329956|FBtr0329957 15517705|15517705|15517705|15515776|15517705 15518751|15518751|15518751|15518751|15518577 TGAGCTTA 8mer-A1 dme-miR-1007-3p 2R - 15518047 15518098 3'utr Khc-73 FlyBase G17885.1 GTTTTTGATATCAATGTGACTTGTTTAACGATGAGCTTATATTTTTACTTGT 32 15518067 0.888361174 8 31 332 0.977272727 1.633468456 0.5 0.34375 0.522727273 32 1 0 43 2R:15518047-15518098 8 20.5 257 FBgn0019968 1323.716667 22.35333333 34.32 0.015486698 0.917089174 0.597319347 0 0 0 0.5 dme-miR-14-3p 7mer-A1 AGACTGA 2R 15572953 15572959 + 2R_15572953_15572959_+ 0.690709008 0.556340543 0.623524775 0.095012878 CG30466 FBtr0340004|FBtr0087339 15572925|15572925 15573170|15573170 2R + 15572941 15572964 3'utr CG30466 FlyBase G16152.1 GAACGAAGCTGTAGACTGATGACT 23 15572960 0.649982143 3 22 73 0.970588235 1.217483944 0.029411765 0.347826087 0.558823529 23 0 1 33 2R:15572941-15572964 7 CG30466 FBtr0087339|FBtr0340004 15572925|15572925 15573170|15573170 AGACTGA 7mer-A1 dme-miR-14-3p 2R + 15572941 15572965 3'utr CG30466 FlyBase G12258.1 GAACGAAGCTGTAGACTGATGACTA 18 15572960 0.660615026 3 17 64 0.928571429 0.937852093 0 0.5 0.678571429 18 0 2 26 2R:15572941-15572965 7 20 258 FBgn0050466 280.3266667 17.32333333 26.4 0.071345335 1.154512219 0.757575758 -7 -7 -7 0.5 dme-miR-965-3p 8mer-A1 TACGCTTA 2R 15993469 15993476 + 2R_15993469_15993476_+ 0.609070564 0.532935193 0.571002878 0.053835858 CG8320 FBtr0087202 15993411 15993707 2R + 15993435 15993491 3'utr CG8320 FlyBase G16233.1 GGTGGTTAAGGGGTTCCTGGTTTTAATGAGATTCTACGCTTAGTTGTGTGTGCGTTT 18 15993461 0.737970341 8 17 175 0.952380952 1 0.142857143 0.111111111 0.238095238 18 0 1 20 2R:15993435-15993491 8 CG8320 FBtr0087202 15993411 15993707 TACGCTTA 8mer-A1 dme-miR-965-3p 2R + 15993442 15993490 3'utr CG8320 FlyBase G12324.1 AAGGGGTTCCTGGTTTTAATGAGATTCTACGCTTAGTTGTGTGTGCGTT 14 15993461 0.822717235 6 12 145 0.842105263 1.204119983 0.421052632 0.285714286 0.473684211 14 3 0 16 2R:15993442-15993490 8 13 259 FBgn0034059 68.78 8.71 13.22666667 0.189008433 1.492537313 0.982862903 8 8 8 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 16013598 16013604 + 2R_16013598_16013604_+ 0.437733006 0.517544888 0.477638947 0.056435536 CG8389 FBtr0087205|FBtr0087205|FBtr0087205|FBtr0087204|FBtr0087204|FBtr0087204 16013535|16013535|16013535|16013535|16013535|16013535 16013815|16013815|16013815|16013815|16013815|16013815 2R + 16013563 16013625 3'utr CG8389 FlyBase G16250.1 AGAGTTTAAGCGAAGGATATCGGTATTGACTGTCATGTGATAGGCGATGAAATGACTTCCCCG 96 16013593 0.983404927 11 81 626 0.833333333 1.301029996 0.416666667 0.21875 0.375 96 16 4 100 2R:16013563-16013625 7 CG8389 FBtr0087205|FBtr0087205|FBtr0087205|FBtr0087204|FBtr0087204|FBtr0087204 16013535|16013535|16013535|16013535|16013535|16013535 16013815|16013815|16013815|16013815|16013815|16013815 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R + 16013562 16013617 3'utr CG8389 FlyBase G12334.1 AAGAGTTTAAGCGAAGGATATCGGTATTGACTGTCATGTGATAGGCGATGAAATGA 56 16013594 0.979146763 10 53 366 0.933333333 1.447158031 0.355555556 0.428571429 0.644444444 56 4 2 84 2R:16013562-16013617 7 64 260 FBgn0034063 106.9966667 6.81 10.28666667 0.598149475 9.3979442 6.221646144 5 4 4.5 0.5 dme-miR-307a-3p 7mer-A1 GTTGTGA 2R 16013663 16013669 + 2R_16013663_16013669_+ 0.613781474 0.805886647 0.709834061 0.135838819 CG8389 FBtr0087205|FBtr0087204 16013535|16013535 16013815|16013815 2R + 16013635 16013681 3'utr CG8389 FlyBase G16251.1 TTCCACTCTCGCCGCAGTAGTTATCTGAGTTGTGAGGAAGGACCAGT 10 16013658 0.971705354 6 10 62 1 1.079181246 0.416666667 0.1 0.25 10 0 0 12 2R:16013635-16013681 7 CG8389 FBtr0087205|FBtr0087204 16013535|16013535 16013815|16013815 GTTGTGA 7mer-A1 dme-miR-307a-3p 2R + 16013635 16013687 3'utr CG8389 FlyBase G12335.1 TTCCACTCTCGCCGCAGTAGTTATCTGAGTTGTGAGGAAGGACCAGTGTCAGG 9 16013660 0.96877785 6 9 53 1 1.146128036 0.5 0.444444444 0.642857143 9 0 0 14 2R:16013635-16013687 7 8 261 FBgn0034063 106.9966667 6.81 10.28666667 0.074768684 1.174743025 0.777705768 5 3 4 0.5 dme-miR-34-5p 7mer-A1 ACTGCCA 2R 16013773 16013779 + 2R_16013773_16013779_+ 0.656064205 0.65974204 0.657903122 0.002600597 CG8389 FBtr0087205|FBtr0087204 16013535|16013535 16013815|16013815 2R + 16013750 16013792 3'utr CG8389 FlyBase G16252.1 TAGCCCCTAGACCTAACTTTTGTACTGCCATAAGAGCCAAAAT 20 16013770 0.915043189 7 19 143 0.956521739 1.041392685 0.043478261 0.15 0.260869565 20 0 1 22 2R:16013750-16013792 7 CG8389 FBtr0087205|FBtr0087204 16013535|16013535 16013815|16013815 ACTGCCA 7mer-A1 dme-miR-34-5p 2R + 16013749 16013789 3'utr CG8389 FlyBase G12336.1 TTAGCCCCTAGACCTAACTTTTGTACTGCCATAAGAGCCAA 15 16013770 0.785004705 5 14 109 0.952380952 1.301029996 0.047619048 0.333333333 0.523809524 15 1 0 20 2R:16013749-16013789 7 17 262 FBgn0034063 106.9966667 6.81 10.28666667 0.158883454 2.496328928 1.652624757 3 3 3 0.5 dme-miR-79-3p 8mer-A1 TAGCTTTA 2R 16060133 16060140 + 2R_16060133_16060140_+ 0.618659478 0.622362743 0.62051111 0.002618558 CG8405 FBtr0340020 16059325 16060835 2R + 16060091 16060163 3'utr CG8405 FlyBase G16263.1 GCCTCCACTGATGCTTCTACTGTTTGCCCAAGCTCTTTGCTTTAGCTTTATGGAATACCATAGGATTGTCAAC 11 16060130 0.991243007 5 9 103 0.9375 1.176091259 0.125 0.272727273 0.5 11 1 0 15 2R:16060091-16060163 8 CG8405 FBtr0340020 16059325 16060835 TAGCTTTA 8mer-A1 dme-miR-79-3p 2R + 16060100 16060174 3'utr CG8405 FlyBase G12340.2 GATGCTTCTACTGTTTGCCCAAGCTCTTTGCTTTAGCTTTATGGAATACCATAGGATTGTCAACTGTAATATATT 11 16060132 0.985149209 7 11 114 1 1.113943352 0.461538462 0.181818182 0.307692308 11 0 0 13 2R:16060100-16060174 8 7 263 FBgn0034071 1286.916667 39.81333333 61.00666667 0.005439358 0.175820496 0.114741558 3 1 2 0.5 dme-miR-980-3p 8mer-A1 GGCAGCTA 2R 16082658 16082665 - 2R_16082658_16082665_- 0.55011077 0.509527853 0.529819311 0.028696444 Dg FBtr0306238|FBtr0087256|FBtr0087258|FBtr0087257 16081174|16081665|16081665|16081665 16083271|16083271|16083271|16083271 2R - 16082618 16082676 3'utr Dg FlyBase G23943.1 CCACGTCCCTGGGCAGCTATTAGACTTTCAGCTTGATTTGCTCAAGCTGAATTGCTTGC 31 16082657 0.841091109 6 29 179 0.947368421 1.255272505 0.236842105 0.193548387 0.342105263 31 1 1 36 2R:16082618-16082676 8 Dg FBtr0087258|FBtr0087257|FBtr0306238|FBtr0087256 16081665|16081665|16081174|16081665 16083271|16083271|16083271|16083271 GGCAGCTA 8mer-A1 dme-miR-980-3p 2R - 16082619 16082676 3'utr Dg FlyBase G18123.1 CCACGTCCCTGGGCAGCTATTAGACTTTCAGCTTGATTTGCTCAAGCTGAATTGCTTG 28 16082657 0.739482349 6 26 155 0.944444444 1.531478917 0.027777778 0.285714286 0.444444444 28 2 0 34 2R:16082619-16082676 8 25.5 264 FBgn0034072 2596.65 61.60333333 94.99 0.009820345 0.41393864 0.26844931 -8 -8 -8 0.5 dme-bantam-3p 6mer3-8 TGATCT 2R 16107213 16107218 + 2R_16107213_16107218_+ 0.502425946 0.948168499 0.725297222 0.315187615 Rho1 FBtr0087216|FBtr0087212|FBtr0087213|FBtr0087217 16106050|16106050|16106050|16106050 16107229|16107229|16107229|16107229 2R + 16107117 16107231 3'utr Rho1 FlyBase G16285.1 ACCGTCAATCGTGTAATTCTCACACAGAAGTTGAAAAACTCGAAGATGCATCAGATACAACCAAACTATATTATACTTATGAATAAACAGTACATTTGATCTACTCTTGGTTTAA 32 16107212 0.984671253 13 31 248 0.975609756 1.602059991 0.219512195 0.28125 0.43902439 32 1 0 40 2R:16107117-16107231 6 Rho1 FBtr0087212|FBtr0087213|FBtr0087217|FBtr0087216 16106050|16106050|16106050|16106050 16107229|16107229|16107229|16107229 TGATCT 6mer3-8 dme-bantam-3p 2R + 16107179 16107225 3'utr Rho1 FlyBase G12360.1 AAACTATATTATACTTATGAATAAACAGTACATTTGATCTACTCTTG 12 16107212 0.98813775 6 10 93 0.8 1.079181246 0.066666667 0.25 0.4 12 3 0 12 2R:16107179-16107225 6 15 265 FBgn0014020 13816.13667 1325.1 2048.813333 0.001085687 0.0113199 0.007321311 1 1 1 0.5 dme-miR-277-3p 7mer-A1 GCATTTA 2R 16141707 16141713 + 2R_16141707_16141713_+ 0.603619943 0.649138842 0.626379392 0.032186723 Got1 FBtr0087231|FBtr0087232 16141592|16141592 16141928|16141928 2R + 16141672 16141794 3'utr Got1 FlyBase G16301.2 ATCCCAAAGCTGGATCACAGATGTCTGCACCATTGGCATTTAAATCAAACCAACAACAATTGCAATTACTAAACGTTTATACGCGGCTTTTAGATGGATATACACATATTATACACCGGAAAC 69 16141705 0.980309831 15 66 466 0.975 1.892094603 0.0875 0.130434783 0.25 69 2 0 78 2R:16141672-16141794 7 Got1 FBtr0087231|FBtr0087232 16141592|16141592 16141928|16141928 GCATTTA 7mer-A1 dme-miR-277-3p 2R + 16141678 16141768 3'utr Got1 FlyBase G12377.1 AAGCTGGATCACAGATGTCTGCACCATTGGCATTTAAATCAAACCAACAACAATTGCAATTACTAAACGTTTATACGCGGCTTTTAGATGG 29 16141705 0.918595857 8 29 185 1 1.672097858 0.063829787 0.413793103 0.638297872 29 0 0 47 2R:16141678-16141768 7 27 266 FBgn0001124 622.6666667 44.53666667 67.53 0.043361884 0.606242048 0.399822301 2 2 2 0.5 dme-miR-980-3p 7mer-m8 GGCAGCT 2R 16145990 16145996 - 2R_16145990_16145996_- 0.641380815 0.652251071 0.646815943 0.007686463 Ext2 FBtr0100513 16145902 16146381 2R - 16145970 16146010 3'utr Ext2 FlyBase G23963.1 TAGGTCGTAATATTGGCAGCTTTTATCTAGACTTTATTTTG 118 16145997 0.783795038 12 103 1142 0.892307692 1.023065304 0.192307692 0.093220339 0.176923077 118 4 10 116 2R:16145970-16146010 7 Ext2 FBtr0100513 16145902 16146381 GGCAGCT 7mer-m8 dme-miR-980-3p 2R - 16145911 16146010 3'utr Ext2 FlyBase G18137.1 TAGGTCGTAATATTGGCAGCTTTTATCTAGACTTTATTTTGATTTTAAATCAATAATTTAAAAAACTGAAACTGGCCTGTAAATAAGAATTAAAATAATC 112 16145998 0.989554471 18 99 985 0.883040936 1.224734438 0.105263158 0.375 0.590643275 112 12 8 151 2R:16145911-16146010 7 98.5 267 FBgn0029175 123.3333333 5.64 8.726666667 0.798648649 17.46453901 11.28724217 1 2 1.5 0.5 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 16184444 16184450 + 2R_16184444_16184450_+ 0.520522712 0.600540072 0.560531392 0.056580846 Lis-1 FBtr0087240|FBtr0087241|FBtr0087236 16183675|16183675|16183675 16185103|16185103|16185103 2R + 16184394 16184476 3'utr Lis-1 FlyBase G16363.1 GATAACAGTTTGCTTCTTTTAACCATATTCACTTTACACAATTCCTGTTTTGTGTTCTTTTTCGCGAAAGGATCTTCAACAAA 47 16184443 0.994858123 9 45 627 0.981818182 1.73239376 0.036363636 0.170212766 0.290909091 47 1 0 54 2R:16184394-16184476 7 Lis-1 FBtr0087236|FBtr0087241|FBtr0087240 16183675|16183675|16183675 16185103|16185103|16185103 TGTGTTC 7mer-m8 dme-miR-317-3p 2R + 16184409 16184460 3'utr Lis-1 FlyBase G12430.1 CTTTTAACCATATTCACTTTACACAATTCCTGTTTTGTGTTCTTTTTCGCGA 27 16184443 0.99430167 6 27 354 1 1.531478917 0.029411765 0.222222222 0.382352941 27 0 0 34 2R:16184409-16184460 7 34.5 268 FBgn0015754 1628.096667 94.36 143.8866667 0.021190388 0.365621026 0.239772043 1 1 1 0.5 dme-miR-980-3p 7mer-m8 GGCAGCT 2R 16194249 16194255 - 2R_16194249_16194255_- 0.568661978 0.563762536 0.566212257 0.00346447 calypso FBtr0087245|FBtr0087246 16194060|16194060 16194434|16194434 2R - 16194231 16194291 3'utr calypso FlyBase G23979.1 ACTCAAATGCGGTTCTTTTAAATACGAAATCAACTTGGCAGCTTCATTTTTATTTGATCGC 175 16194257 0.832030415 6 172 1135 0.985148515 1.696793085 0.475247525 0.131428571 0.247524752 175 0 3 199 2R:16194231-16194291 7 calypso FBtr0087246|FBtr0087245 16194060|16194060 16194434|16194434 GGCAGCT 7mer-m8 dme-miR-980-3p 2R - 16194231 16194268 3'utr calypso FlyBase G18147.1 ACGAAATCAACTTGGCAGCTTCATTTTTATTTGATCGC 147 16194257 0.838331054 4 146 982 0.990990991 2.342422681 0.436936937 0.367346939 0.581081081 147 2 0 220 2R:16194231-16194268 7 159.5 269 FBgn0262166 217.8466667 12.40333333 18.96 0.732166356 12.85944639 8.412447257 2 2 2 0.5 dme-miR-8-3p 7mer-m8 CAGTATT 2R 16194362 16194368 - 2R_16194362_16194368_- 0.506648133 0.415360015 0.461004074 0.064550435 calypso FBtr0087245|FBtr0087246 16194060|16194060 16194434|16194434 2R - 16194315 16194391 3'utr calypso FlyBase G23980.1 TGCATTTTTAAGACCATTCATTCCAGTATTGTTTTTCTACAATTTCCCCACCAAGAAGCACCATTAACCCATAAGAT 28 16194371 0.989152823 6 28 266 1 1.477121255 0.1 0.071428571 0.133333333 28 0 0 30 2R:16194315-16194391 7 calypso FBtr0087246|FBtr0087245 16194060|16194060 16194434|16194434 CAGTATT 7mer-m8 dme-miR-8-3p 2R - 16194335 16194392 3'utr calypso FlyBase G18148.1 TTGCATTTTTAAGACCATTCATTCCAGTATTGTTTTTCTACAATTTCCCCACCAAGAA 8 16194371 0.991667507 3 8 87 1 1.146128036 0.142857143 0.375 0.642857143 8 0 0 14 2R:16194335-16194392 7 15 270 FBgn0262166 217.8466667 12.40333333 18.96 0.06885577 1.209352325 0.791139241 3 3 3 0.5 dme-miR-263a-5p 8mer-A1 GTGCCATA 2R 16792035 16792042 + 2R_16792035_16792042_+ 0.385394834 0.485548873 0.435471853 0.070819643 CG5522 FBtr0087030|FBtr0087029|FBtr0087031|FBtr0087028|FBtr0087026 16791350|16791350|16791350|16791350|16791350 16792472|16792472|16792472|16792472|16792472 2R + 16792015 16792057 3'utr CG5522 FlyBase G16513.1 AACTTAATTTTGCGCAGACTGTGCCATATTAGTTTATAAATTT 37 16792050 0.710439854 10 17 398 0.454545455 0.823908741 0 0.189189189 0.318181818 37 22 2 20 2R:16792015-16792057 8 CG5522 FBtr0087026|FBtr0087031|FBtr0087028|FBtr0087030|FBtr0087029 16791350|16791350|16791350|16791350|16791350 16792472|16792472|16792472|16792472|16792472 GTGCCATA 8mer-A1 dme-miR-263a-5p 2R + 16792020 16792092 3'utr CG5522 FlyBase G12557.1 AATTTTGCGCAGACTGTGCCATATTAGTTTATAAATTTATGTGTCTACACAAACACTGTTGGCCAGCAAACGA 22 16792047 0.992254127 11 14 194 0.653846154 0.753327667 0.038461538 0.136363636 0.269230769 22 7 2 17 2R:16792020-16792092 8 26.5 271 FBgn0034158 1968.163333 68.45666667 105.0966667 0.01346433 0.387106199 0.252148815 -15 -12 -13.5 0.5 dme-miR-304-5p 7mer-m8 TGAGATT 2R 16952530 16952536 + 2R_16952530_16952536_+ 0.609335106 0.600088961 0.604712034 0.00653798 CG34191 FBtr0112384|FBtr0340071 16952500|16952500 16952581|16952581 2R + 16952513 16952570 3'utr CG34191 FlyBase G16563.1 CCATCTTATTTACCCTTTGAGATTTTCCCCCTTTTTGATGCTTATTAAATGTTAAACA 56 16952529 0.805840238 10 54 619 0.971830986 1.838849091 0 0.232142857 0.394366197 56 2 0 69 2R:16952513-16952570 7 CG34191 FBtr0340071|FBtr0112384 16952500|16952500 16952581|16952581 TGAGATT 7mer-m8 dme-miR-304-5p 2R + 16952511 16952567 3'utr CG34191 FlyBase G12597.1 TCCCATCTTATTTACCCTTTGAGATTTTCCCCCTTTTTGATGCTTATTAAATGTTAA 24 16952529 0.765002373 7 24 248 1 1.544068044 0.085714286 0.291666667 0.514285714 24 0 0 35 2R:16952511-16952567 7 28.5 272 FBgn0085220 88.66666667 25.16333333 38.02 0.321428571 1.132600344 0.749605471 1 1 1 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 17016685 17016691 - 2R_17016685_17016691_- 0.744307084 0.756065493 0.750186289 0.008314444 CG8963 FBtr0087017|FBtr0087017|FBtr0087017|FBtr0300573|FBtr0300573|FBtr0300573|FBtr0340126|FBtr0340126|FBtr0340126|FBtr0087016|FBtr0087016|FBtr0087016 17016224|17016224|17016224|17016344|17016344|17016344|17016344|17016344|17016344|17016344|17016344|17016344 17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965 2R - 17016641 17016731 3'utr CG8963 FlyBase G24205.1 AATATGACATGTGTTAATGACTTTGTTCGAACGCTTTTTGTGTGATACGCCCGTTTTGTATCTCTGATAACTAACTCTCTGCCATGATAGC 29 17016693 0.987794464 14 29 257 1 1.602059991 0.3 0.24137931 0.45 29 0 0 40 2R:17016641-17016731 7 CG8963 FBtr0340126|FBtr0340126|FBtr0340126|FBtr0087016|FBtr0087016|FBtr0087016|FBtr0087017|FBtr0087017|FBtr0087017|FBtr0300573|FBtr0300573|FBtr0300573 17016344|17016344|17016344|17016344|17016344|17016344|17016224|17016224|17016224|17016344|17016344|17016344 17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965|17016965 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 17016663 17016715 3'utr CG8963 FlyBase G18326.1 ATGACTTTGTTCGAACGCTTTTTGTGTGATACGCCCGTTTTGTATCTCTGATA 14 17016695 0.751333013 7 13 136 0.863636364 1.278753601 0.181818182 0.428571429 0.636363636 14 3 0 19 2R:17016663-17016715 7 15.5 273 FBgn0034181 880.38 38.95666667 59.94333333 0.017606034 0.397877984 0.258577545 2 4 3 0.5 dme-miR-283-5p 7mer-m8 TGATATT 2R 17025158 17025164 + 2R_17025158_17025164_+ 0.382236877 0.459717266 0.420977072 0.054786916 Dark FBtr0086967 17023336 17026703 2R + 17025100 17025178 3'utr Dark FlyBase G16608.1 CTCAAACAGGTCAGTCCCAACATTCTGGTGGCGTCGGCACACAGTGCCCAGAAGACTGTGATATTCCAGCTGGAAAAGA 23 17025162 0.96525622 7 22 117 0.964285714 1.130333768 0.142857143 0.173913043 0.321428571 23 0 1 27 2R:17025100-17025178 7 Dark FBtr0086967 17023336 17026703 TGATATT 7mer-m8 dme-miR-283-5p 2R + 17025111 17025177 3'utr Dark FlyBase G12631.1 CAGTCCCAACATTCTGGTGGCGTCGGCACACAGTGCCCAGAAGACTGTGATATTCCAGCTGGAAAAG 16 17025162 0.952402022 6 16 73 1 1.431363764 0.222222222 0.375 0.62962963 16 0 0 27 2R:17025111-17025177 7 17 274 FBgn0263864 792.71 19.97666667 30.85666667 0.021445421 0.850992825 0.550934428 -4 -4 -4 0.5 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 17092972 17092979 + 2R_17092972_17092979_+ 0.624208603 0.611105101 0.617656852 0.009265574 CG6984 FBtr0086979 17092926 17093070 2R + 17092942 17092992 3'utr CG6984 FlyBase G16685.1 ATGAAATAATGAATCAAAACTGACCAATTGTGCATTTATACTTTTAAGCTT 29 17092970 0.853743806 8 28 236 1 1.544068044 0 0.172413793 0.314285714 29 0 0 35 2R:17092942-17092992 8 CG6984 FBtr0086979 17092926 17093070 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 17092944 17093002 3'utr CG6984 FlyBase G12690.1 GAAATAATGAATCAAAACTGACCAATTGTGCATTTATACTTTTAAGCTTGAATTGTCCA 22 17092969 0.991127551 9 20 210 0.9375 1.176091259 0.09375 0.409090909 0.59375 22 1 1 30 2R:17092944-17093002 8 23 275 FBgn0034191 139.3066667 16.87666667 25.83666667 0.165103369 1.362828363 0.890207715 2 3 2.5 0.5 dme-miR-999-3p 7mer-m8 AGTTAAC 2R 17364465 17364471 + 2R_17364465_17364471_+ 0.581305516 0.443280975 0.512293246 0.09759806 mbl FBtr0336940|FBtr0306604|FBtr0306606|FBtr0306603|FBtr0336941|FBtr0306601|FBtr0336942 17363985|17363985|17363985|17363985|17363985|17363985|17363985 17365386|17365386|17365386|17365386|17365386|17365386|17365386 2R + 17364410 17364486 3'utr mbl FlyBase G16728.1 GAGAAACAGATGTTAGATGATAGTAATACTTAAGTTCCTTTTTTGAATAGCTCTTAGTTAACTCTAGTTTATAGGAA 10 17364463 0.937767874 7 9 97 0.916666667 1.041392685 0 0.2 0.333333333 10 1 0 11 2R:17364410-17364486 7 mbl FBtr0336942|FBtr0306603|FBtr0336941|FBtr0306601|FBtr0306604|FBtr0306606|FBtr0336940 17363985|17363985|17363985|17363985|17363985|17363985|17363985 17365386|17365386|17365386|17365386|17365386|17365386|17365386 AGTTAAC 7mer-m8 dme-miR-999-3p 2R + 17364397 17364496 3'utr mbl FlyBase G12716.1 CAAGCGAACGGAAGAGAAACAGATGTTAGATGATAGTAATACTTAAGTTCCTTTTTTGAATAGCTCTTAGTTAACTCTAGTTTATAGGAAACGGTCACAC 11 17364449 0.989237958 8 10 93 1 1.176091259 0 0.363636364 0.533333333 11 0 0 15 2R:17364397-17364496 7 4 276 FBgn0265487 1263.543333 28.89333333 44.05 0.003165701 0.13844024 0.090805902 2 16 9 0.5 dme-miR-7-5p 7mer-m8 GTCTTCC 2R 17414419 17414425 - 2R_17414419_17414425_- 0.700887849 0.700464059 0.700675954 0.000299601 cnk FBtr0086962|FBtr0340214 17413968|17413968 17414572|17414572 2R - 17414401 17414476 3'utr cnk FlyBase G24265.1 ATATAGCGATATTCTCGTACGATTTAGGTATACAACTTGTTCATTTTGATCGTCTTCCCTGTCTGTCCACCAGAAA 93 17414422 0.697757003 14 89 1018 0.963302752 1.720159303 0.220183486 0.150537634 0.275229358 93 3 1 105 2R:17414401-17414476 7 cnk FBtr0086962|FBtr0340214 17413968|17413968 17414572|17414572 GTCTTCC 7mer-m8 dme-miR-7-5p 2R - 17414402 17414486 3'utr cnk FlyBase G18369.1 TATATATTATATATAGCGATATTCTCGTACGATTTAGGTATACAACTTGTTCATTTTGATCGTCTTCCCTGTCTGTCCACCAGAA 65 17414422 0.991835438 14 65 715 1 1.986771734 0.206185567 0.369230769 0.577319588 65 0 0 97 2R:17414402-17414486 7 73.5 277 FBgn0021818 1145.12 24.51333333 37.43 0.064185413 2.998368235 1.963665509 -3 -3 -3 0.5 dme-miR-304-5p 8mer-A1 TGAGATTA 2R 17473681 17473688 + 2R_17473681_17473688_+ 0.56880317 0.600044397 0.584423784 0.022090864 qkr54B FBtr0306248|FBtr0331464 17472244|17473146 17474648|17475129 2R + 17473656 17473703 3'utr qkr54B FlyBase G16798.1 TGACGGTCGGTAGAGACAGAATCTATGAGATTAATTAACTTAATAGAA 14 17473681 0.981784032 2 14 95 1 1.278753601 0 0.214285714 0.421052632 14 0 0 19 2R:17473656-17473703 8 qkr54B FBtr0306248|FBtr0331464 17472244|17473146 17474648|17475129 TGAGATTA 8mer-A1 dme-miR-304-5p 2R + 17473656 17473704 3'utr qkr54B FlyBase G12775.1 TGACGGTCGGTAGAGACAGAATCTATGAGATTAATTAACTTAATAGAAT 10 17473681 0.783293786 3 8 68 0.714285714 0.698970004 0 0.2 0.428571429 10 3 1 10 2R:17473656-17473704 8 10 278 FBgn0022987 869.43 42.83333333 65.55 0.011501789 0.233463035 0.152555301 0 0 0 0.5 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 17517269 17517276 + 2R_17517269_17517276_+ 0.397907275 0.439084314 0.418495794 0.029116536 CG4853 FBtr0340216|FBtr0086938|FBtr0086939 17517103|17517103|17517103 17517445|17517445|17517445 2R + 17517246 17517282 3'utr CG4853 FlyBase G16812.1 ACTTCCACTGTGTTTGTTAATTTGTACTTAAGCTTAG 17 17517268 0.755638286 4 17 189 1 1.278753601 0.157894737 0.117647059 0.210526316 17 0 0 19 2R:17517246-17517282 8 CG4853 FBtr0086939|FBtr0340216|FBtr0086938 17517103|17517103|17517103 17517445|17517445|17517445 GTACTTAA 8mer-A1 dme-miR-252-5p 2R + 17517231 17517289 3'utr CG4853 FlyBase G12784.1 AATAATAACTCTTACACTTCCACTGTGTTTGTTAATTTGTACTTAAGCTTAGACGACGG 18 17517268 0.855340985 6 17 161 0.962962963 1.414973348 0.259259259 0.388888889 0.592592593 18 1 0 26 2R:17517231-17517289 8 16 279 FBgn0034230 943.6633333 39.8 60.59666667 0.016955199 0.40201005 0.264040926 1 1 1 0.5 dme-miR-11-3p 7mer-m1 TGTGATG 2R 17573277 17573283 + 2R_17573277_17573283_+ 0.410523386 0.422485098 0.416504242 0.008458199 CG42239 FBtr0290307 17573200 17573330 2R + 17573247 17573298 3'utr CG42239 FlyBase G16881.1 TTTATTGCATATATGTATGTATGCAAATTGTGTGATGAATAGAAGAGGGTTT 29 17573275 0.977089508 6 27 214 0.916666667 1.51851394 0.333333333 0.24137931 0.388888889 29 3 0 33 2R:17573247-17573298 7 CG42239 FBtr0290307 17573200 17573330 TGTGATG 7mer-m1 dme-miR-11-3p 2R + 17573238 17573302 3'utr CG42239 FlyBase G12842.1 TTTTATACTTTTATTGCATATATGTATGTATGCAAATTGTGTGATGAATAGAAGAGGGTTTTTGA 30 17573275 0.982820351 6 30 232 1 1.653212514 0.244444444 0.433333333 0.622222222 30 0 0 45 2R:17573238-17573302 7 28.5 280 FBgn0250868 189.67 62.33666667 95.58 0.15026098 0.457194802 0.298179535 2 2 2 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 17673099 17673105 - 2R_17673099_17673105_- 0.634434211 0.652935183 0.643684697 0.013082183 Sema-1b FBtr0086891|FBtr0086891|FBtr0086891|FBtr0086890|FBtr0086890|FBtr0086890 17672837|17672837|17672837|17672837|17672837|17672837 17674309|17674309|17674309|17674309|17674309|17674309 2R - 17673061 17673131 3'utr Sema-1b FlyBase G24433.1 AAACGTAATGTAATGATTTCTCATATTGTGATAGATTTTATTGAAATTTTAGAAAGATGAAATGATATGCC 147 17673106 0.991906343 8 140 1552 0.956756757 1.645913275 0.459459459 0.210884354 0.372972973 147 5 3 177 2R:17673061-17673131 7 Sema-1b FBtr0086890|FBtr0086890|FBtr0086890|FBtr0086891|FBtr0086891|FBtr0086891 17672837|17672837|17672837|17672837|17672837|17672837 17674309|17674309|17674309|17674309|17674309|17674309 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 17673090 17673132 3'utr Sema-1b FlyBase G18485.1 AAAACGTAATGTAATGATTTCTCATATTGTGATAGATTTTATT 95 17673106 0.751582062 6 93 987 0.98630137 1.857332496 0.328767123 0.347368421 0.575342466 95 1 1 144 2R:17673090-17673132 7 120 281 FBgn0016059 2585.713333 78.05 119.2733333 0.046408857 1.537475977 1.006092449 1 1 1 0.5 dme-miR-282-5p 6mer2-7 GAGGCT 2R 17673567 17673572 - 2R_17673567_17673572_- 0.520541456 0.527700306 0.524120881 0.005062036 Sema-1b FBtr0086891|FBtr0302161|FBtr0086890 17672837|17673285|17672837 17674309|17674309|17674309 2R - 17673537 17673638 3'utr Sema-1b FlyBase G24435.1 TAAGGAATTGAACATAGAATGTAATTAAAAGTACGAACTAGGCTAAGAAACGAAGAAAACTTCTATGAGGCTGTTTGATAAGAACTGACACCGCAGCCCCCA 250 17673573 0.99021527 11 243 1776 0.975945017 1.976197085 0.18556701 0.144 0.264604811 250 5 2 284 2R:17673537-17673638 6 Sema-1b FBtr0086890|FBtr0302161|FBtr0086891 17672837|17673285|17672837 17674309|17674309|17674309 GAGGCT 6mer2-7 dme-miR-282-5p 2R - 17673535 17673594 3'utr Sema-1b FlyBase G18488.1 AAGAAACGAAGAAAACTTCTATGAGGCTGTTTGATAAGAACTGACACCGCAGCCCCCACA 170 17673573 0.981792446 8 163 1198 0.958333333 1.662757832 0.2375 0.311764706 0.5125 170 6 4 230 2R:17673535-17673594 6 202.5 282 FBgn0016059 2585.713333 78.05 119.2733333 0.078314946 2.594490711 1.697781007 1 1 1 0.5 dme-bantam-3p 6mer2-7 GATCTC 2R 17690185 17690190 + 2R_17690185_17690190_+ 0.773474517 0.911601558 0.842538037 0.097670609 HPS4 FBtr0086839|FBtr0086840 17690041|17690041 17690822|17690822 2R + 17690145 17690210 3'utr HPS4 FlyBase G16946.1 GAATAGCCAACTTAATGCCATCCACTGTTATTTCATTTGCGATCTCTGGCTGATTCCTTCGTGAGT 258 17690181 0.890951336 11 244 2630 0.948717949 1.772321707 0.298076923 0.186046512 0.326923077 258 12 4 296 2R:17690145-17690210 6 HPS4 FBtr0086839|FBtr0086840 17690041|17690041 17690822|17690822 GATCTC 6mer2-7 dme-bantam-3p 2R + 17690130 17690211 3'utr HPS4 FlyBase G12894.1 GTCTGGGTCCCCGAAGAATAGCCAACTTAATGCCATCCACTGTTATTTCATTTGCGATCTCTGGCTGATTCCTTCGTGAGTC 153 17690181 0.879159978 15 140 1519 0.894495413 1.511883361 0.408256881 0.320261438 0.52293578 153 18 5 195 2R:17690130-17690211 6 157.5 283 FBgn0034261 255.3 8.836666667 13.49666667 0.616921269 17.82346284 11.66954804 4 4 4 0.5 dme-miR-932-5p 7mer-A1 GAATTGA 2R 18119471 18119477 - 2R_18119471_18119477_- 0.527318345 0.813005913 0.670162129 0.202011639 stau FBtr0086783|FBtr0086784 18117894|18117894 18119780|18119780 2R - 18119419 18119480 3'utr stau FlyBase G24574.1 TGAGAATTGAATAACGAATCGAACTGATAGTAACCGAAACTGAACAGAGGCGAACACTTAAC 14 18119453 0.939947215 5 14 54 1 1.255272505 0.166666667 0.285714286 0.444444444 14 0 0 18 2R:18119419-18119480 7 stau FBtr0086784|FBtr0086783 18117894|18117894 18119780|18119780 GAATTGA 7mer-A1 dme-miR-932-5p 2R - 18119421 18119479 3'utr stau FlyBase G18591.1 GAGAATTGAATAACGAATCGAACTGATAGTAACCGAAACTGAACAGAGGCGAACACTTA 17 18119452 0.955733922 7 15 67 0.913043478 1.322219295 0.47826087 0.294117647 0.47826087 17 2 0 21 2R:18119421-18119479 7 8.5 284 FBgn0003520 789.19 18.35 28.11 0.010770537 0.463215259 0.302383493 -24 -25 -24.5 0.5 dme-miR-92b-3p 7mer-m1 TGCAATT 2R 18119736 18119742 - 2R_18119736_18119742_- 0.696102944 0.480057543 0.588080243 0.152767167 stau FBtr0086783|FBtr0086784 18117894|18117894 18119780|18119780 2R - 18119710 18119794 stop_codon stau FlyBase G24578.1 ATGCCATGAAATAAGCATAAAGCGCTGAAAATTTCACAAAACCCTTATTAACTGCAATTTTTGTTGTTGCACATAAGCATGATAA 28 18119744 0.989184775 12 23 213 0.833333333 1.176091259 0.027777778 0.214285714 0.388888889 28 5 1 30 2R:18119710-18119794 7 stau FBtr0086784|FBtr0301614|FBtr0086783 18117894|18119622|18117894 18119780|18119780|18119780 TGCAATT 7mer-m1 dme-miR-92b-3p 2R - 18119711 18119775 3'utr stau FlyBase G18594.1 AAGCGCTGAAAATTTCACAAAACCCTTATTAACTGCAATTTTTGTTGTTGCACATAAGCATGATA 23 18119741 0.993817712 7 15 187 0.675 1.431363764 0.075 0.434782609 0.675 23 13 0 27 2R:18119711-18119775 7 19 285 FBgn0003520 789.19 18.35 28.11 0.024075318 1.035422343 0.675916044 2 -1 0.5 0.5 dme-miR-1003-3p 7mer-m8 ATGTGAG 2R 18154173 18154179 - 2R_18154173_18154179_- 0.631691136 0.666532626 0.649111881 0.024636661 lolal FBtr0086777 18154093 18155147 2R - 18154141 18154197 3'utr lolal FlyBase G24616.1 ATGTATGTATATGTATACATGTGAGCATAGATTTAAAGAAACTACGGTAAATAAACA 27 18154170 0.988774769 7 22 204 0.766666667 1.06069784 0.133333333 0.074074074 0.166666667 27 6 1 23 2R:18154141-18154197 7 lolal FBtr0086777 18154093 18155147 ATGTGAG 7mer-m8 dme-miR-1003-3p 2R - 18154134 18154197 3'utr lolal FlyBase G18621.1 ATGTATGTATATGTATACATGTGAGCATAGATTTAAAGAAACTACGGTAAATAAACAGAATAAT 21 18154182 0.987268663 8 17 145 0.810810811 1.477121255 0.162162162 0.476190476 0.702702703 21 7 0 30 2R:18154134-18154197 7 23.5 286 FBgn0022238 614.5133333 54.55666667 83.64333333 0.038241644 0.430744791 0.280954848 -9 3 -3 0.5 dme-miR-980-3p 7mer-A1 GCAGCTA 2R 18164340 18164346 + 2R_18164340_18164346_+ 0.701865334 0.687119347 0.69449234 0.010426997 CG10915 FBtr0345416 18163524 18164746 2R + 18164292 18164421 3'utr CG10915 FlyBase G17123.2 ATAGTTCTTAGGTGCGTCGCATACGTGTGTAATCAACTTCCTCCATGTGCAGCTAACATACTGAATTATTTCGTAGTGTTTGATTTATATATTAAGTTCTAAGTTCGGCCTAAGCACCTTTGTTTGCCCG 136 18164337 0.981511724 18 129 890 0.958333333 1.90579588 0.035714286 0.183823529 0.339285714 136 6 1 161 2R:18164292-18164421 7 CG10915 FBtr0345416 18163524 18164746 GCAGCTA 7mer-A1 dme-miR-980-3p 2R + 18164289 18164389 3'utr CG10915 FlyBase G13045.2 TTAATAGTTCTTAGGTGCGTCGCATACGTGTGTAATCAACTTCCTCCATGTGCAGCTAACATACTGAATTATTTCGTAGTGTTTGATTTATATATTAAGTT 81 18164337 0.796114938 13 79 504 1 2.096910013 0.04 0.419753086 0.624 81 0 0 125 2R:18164289-18164389 7 91.5 287 FBgn0034308 795.0233333 28.65333333 43.94333333 0.115090962 3.193345742 2.082227111 3 3 3 0.5 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 18175678 18175685 - 2R_18175678_18175685_- 0.578532529 0.571367509 0.574950019 0.00506642 CG5726 FBtr0086772 18175253 18176079 2R - 18175666 18175697 3'utr CG5726 FlyBase G24658.1 GCTTAGAAACTAAGTACAAAGTCAATGAAAAA 5 18175672 0.866793604 4 5 18 1 0.903089987 0.375 0.6 0.75 5 0 0 8 2R:18175666-18175697 8 CG5726 FBtr0086772 18175253 18176079 AGTACAAA 8mer-A1 dme-miR-305-5p 2R - 18175658 18175701 3'utr CG5726 FlyBase G18657.1 AATTGCTTAGAAACTAAGTACAAAGTCAATGAAAAAACAAAAAT 6 18175696 0.977280583 4 5 25 0.857142857 0.77815125 0 0.166666667 0.285714286 6 1 0 6 2R:18175658-18175701 8 5 288 FBgn0034313 580.9266667 20.17 30.98666667 0.008606938 0.24789291 0.161359725 -13 11 -1 0.5 dme-miR-8-3p 7mer-A1 AGTATTA 2R 18667696 18667702 - 2R_18667696_18667702_- 0.782190844 0.665797118 0.723993981 0.082302775 edl FBtr0086652 18667525 18667828 2R - 18667676 18667753 3'utr edl FlyBase G24819.1 TCTAGTTATGCTAGCTTATAATGCCTAGTCCTTAGTTCTGCTCGTCATTTAAGTATTAGCGATAATATTCTGCATTTC 42 18667699 0.815674908 17 39 392 0.9375 1.176091259 0.083333333 0.095238095 0.208333333 42 1 2 45 2R:18667676-18667753 7 edl FBtr0086652 18667525 18667828 AGTATTA 7mer-A1 dme-miR-8-3p 2R - 18667680 18667746 3'utr edl FlyBase G18771.1 ATGCTAGCTTATAATGCCTAGTCCTTAGTTCTGCTCGTCATTTAAGTATTAGCGATAATATTCTGCA 29 18667721 0.732285855 12 29 243 1 1.633468456 0.11627907 0.379310345 0.581395349 29 0 0 43 2R:18667680-18667746 7 19.5 289 FBgn0023214 335.02 28.75666667 44.53 0.05820548 0.678103628 0.437907029 -3 19 8 0.5 dme-miR-1008-3p 8mer-A1 AGCTGTGA 2R 18704858 18704865 + 2R_18704858_18704865_+ 0.436041146 0.454943669 0.445492407 0.013366157 Sik3 FBtr0340388|FBtr0344259|FBtr0304025|FBtr0344258|FBtr0304026 18704794|18704794|18704794|18704794|18704794 18705805|18705805|18705805|18705805|18705805 2R + 18704800 18704916 3'utr Sik3 FlyBase G17294.1 TGGAATCCCGCCCTGCTAGCTACCCAAAATGACTACTCGCCTTGCCTAAACTCTGCGTAGCTGTGATTAAAGTCGATATGTACGATATAGCCATCCTAAACCAGTAGCAATTGGACA 73 18704857 0.984407599 15 66 516 0.895348837 1.284430734 0.290697674 0.109589041 0.244186047 73 6 3 77 2R:18704800-18704916 8 Sik3 FBtr0304026|FBtr0340388|FBtr0344259|FBtr0304025|FBtr0344258 18704794|18704794|18704794|18704794|18704794 18705805|18705805|18705805|18705805|18705805 AGCTGTGA 8mer-A1 dme-miR-1008-3p 2R + 18704825 18704920 3'utr Sik3 FlyBase G13180.1 AAAATGACTACTCGCCTTGCCTAAACTCTGCGTAGCTGTGATTAAAGTCGATATGTACGATATAGCCATCCTAAACCAGTAGCAATTGGACAGGAG 49 18704857 0.98051844 13 45 320 0.958333333 1.361727836 0.222222222 0.306122449 0.527777778 49 1 2 69 2R:18704825-18704920 8 45 290 FBgn0262103 424.8866667 8.64 13.18 0.105910596 5.208333333 3.414264036 1 1 1 0.5 dme-miR-308-3p 8mer-m1 CTGTGATT 2R 18705649 18705656 + 2R_18705649_18705656_+ 0.37684392 0.370435068 0.373639494 0.004531706 Sik3 FBtr0340388|FBtr0344259|FBtr0304025|FBtr0344258|FBtr0304026 18704794|18704794|18704794|18704794|18704794 18705805|18705805|18705805|18705805|18705805 2R + 18705602 18705701 3'utr Sik3 FlyBase G17298.1 ACGGATTAAACACAACATTGATAAATCTATTTTTTAATGAAAGACTGCTGTGATTTTACATGTAATTAATTTAGAGCGAAAGAAGGTAGGAGTAAATAAC 277 18705647 0.987338983 20 271 2392 0.973988439 2.527629901 0.046242775 0.198555957 0.358381503 277 9 0 337 2R:18705602-18705701 8 Sik3 FBtr0304026|FBtr0340388|FBtr0344259|FBtr0304025|FBtr0344258 18704794|18704794|18704794|18704794|18704794 18705805|18705805|18705805|18705805|18705805 CTGTGATT 8mer-m1 dme-miR-308-3p 2R + 18705620 18705693 3'utr Sik3 FlyBase G13186.1 TGATAAATCTATTTTTTAATGAAAGACTGCTGTGATTTTACATGTAATTAATTTAGAGCGAAAGAAGGTAGGAG 262 18705647 0.987533432 15 259 2301 0.984415584 2.57863921 0.051948052 0.351145038 0.558441558 262 6 0 379 2R:18705620-18705693 8 261.5 291 FBgn0262103 424.8866667 8.64 13.18 0.61545824 30.2662037 19.84066768 2 2 2 0.5 dme-miR-283-5p 8mer-m1 TGATATTT 2R 18774338 18774345 + 2R_18774338_18774345_+ 0.462623689 0.398428703 0.430526196 0.04539272 Mctp FBtr0346955|FBtr0330004|FBtr0110970|FBtr0345950|FBtr0330005|FBtr0110971 18773742|18773952|18773742|18773742|18773742|18773742 18774667|18774667|18774667|18774824|18774667|18774667 2R + 18774280 18774507 3'utr Mctp FlyBase G17318.1 AGATTCCTTTTTGCGCGAATCCAAATGCGATTAATTATTTATTGTGTATTTCAATTTGTGATATTTTCAAAGAATTTTGCAACTAGGCTTACTACTTAATGTGACTTAAACCACGGAAGCTCCGTACCGCACAGAAGTTTCCCCCAAACTCCATTTACAATTTACCACTCGATTGCACTCGACTCGTTTAAGGACGCTTTTTCATTATATACCTTTACATATATACCT 159 18774334 0.92636924 40 153 1654 0.970149254 2.290034611 0.114427861 0.194968553 0.36318408 159 6 0 195 2R:18774280-18774507 8 Mctp FBtr0330005|FBtr0110971|FBtr0346955|FBtr0330004|FBtr0110970|FBtr0345950 18773742|18773742|18773742|18773952|18773742|18773742 18774667|18774667|18774667|18774667|18774667|18774824 TGATATTT 8mer-m1 dme-miR-283-5p 2R + 18774316 18774405 3'utr Mctp FlyBase G13204.1 ATTTATTGTGTATTTCAATTTGTGATATTTTCAAAGAATTTTGCAACTAGGCTTACTACTTAATGTGACTTAAACCACGGAAGCTCCGTA 108 18774334 0.764711591 14 99 1191 0.915584416 1.848189117 0.168831169 0.342592593 0.538961039 108 12 1 141 2R:18774316-18774405 8 87.5 292 FBgn0034389 335.3666667 10.34333333 15.83333333 0.260908458 8.459555269 5.526315789 4 4 4 0.5 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 2R 18822378 18822385 - 2R_18822378_18822385_- 0.566955352 0.57251781 0.569736581 0.003933211 CG15097 FBtr0303237|FBtr0330604|FBtr0086630|FBtr0330605 18822186|18822186|18822186|18822186 18822959|18822608|18822959|18822581 2R - 18822327 18822400 3'utr CG15097 FlyBase G24859.1 ACACACACACATGTTTCTAGTCAAGATCTCTCACACACACACAACATGGGAATGCCGCGGGGACACAACTCCTG 133 18822386 0.999702155 8 127 871 0.960784314 1.69019608 0.019607843 0.135338346 0.248366013 133 4 2 147 2R:18822327-18822400 8 CG15097 FBtr0330605|FBtr0086630|FBtr0330604|FBtr0303237 18822186|18822186|18822186|18822186 18822581|18822959|18822608|18822959 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R - 18822357 18822400 3'utr CG15097 FlyBase G18804.1 ACACACACACATGTTTCTAGTCAAGATCTCTCACACACACACAA 74 18822386 0.83947615 9 71 461 0.965217391 2.045322979 0.017391304 0.432432432 0.634782609 74 4 0 111 2R:18822357-18822400 8 101 293 FBgn0034396 75.66666667 3.096666667 4.676666667 1.334801762 32.61571582 21.59657876 1 1 1 0.5 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 18846948 18846955 - 2R_18846948_18846955_- 0.481943098 0.545658608 0.513800853 0.045053662 CG15100 FBtr0086627 18846856 18847082 2R - 18846901 18847065 3'utr CG15100 FlyBase G24926.1 TAAAAATCACGCTGGACGCTTTTACCTCAGCCCTTTTAATCAGGCATTCGATGGCAAATCTTTAGTCACGGACTGGCACAGTTCAATTCATCTCCCATAAGTTTTGCGTTTGCATTTAACAACCTTTTGTATTTATTCGAAGTATGGCTAAATATTCAGTTAGTA 38 18846956 0.797852664 12 38 298 1 1.643452676 0.113636364 0.105263158 0.227272727 38 0 0 44 2R:18846901-18847065 8 CG15100 FBtr0086627 18846856 18847082 TGCATTTA 8mer-A1 dme-miR-277-3p 2R - 18846928 18846967 3'utr CG15100 FlyBase G18855.1 AAGTTTTGCGTTTGCATTTAACAACCTTTTGTATTTATTC 11 18846956 0.989241882 2 10 103 0.923076923 1.079181246 0 0.181818182 0.307692308 11 1 0 12 2R:18846928-18846967 8 12.5 294 FBgn0034401 874.54 30.91333333 47.1 0.014293228 0.404356265 0.265392781 1 1 1 0.5 dme-miR-14-3p 7mer-m8 AAGACTG 2R 18971406 18971412 - 2R_18971406_18971412_- 0.438728119 0.65926478 0.54899645 0.155942996 CG15107 FBtr0331978|FBtr0086600 18971307|18971307 18971590|18971590 2R - 18971383 18971423 3'utr CG15107 FlyBase G24977.1 TAGTCGTTTTTAAGACTGTTGTTATGCATATCGTTCGACGA 9 18971403 0.633926329 4 7 86 0.818181818 0.954242509 0.090909091 0.222222222 0.363636364 9 2 0 9 2R:18971383-18971423 7 CG15107 FBtr0086600|FBtr0331978 18971307|18971307 18971590|18971590 AAGACTG 7mer-m8 dme-miR-14-3p 2R - 18971401 18971422 3'utr CG15107 FlyBase G18891.1 AGTCGTTTTTAAGACTGTTGTT 5 18971405 0.788339959 2 2 27 0.444444444 0.602059991 0.777777778 0.4 0.666666667 5 5 0 4 2R:18971401-18971422 7 6.5 295 FBgn0041702 455.9833333 51.29666667 78.86 0.014254907 0.126713887 0.08242455 -9 -7 -8 0.5 dme-miR-308-3p 7mer-m1 TGTGATT 2R 19430739 19430745 - 2R_19430739_19430745_- 0.520372678 0.520138866 0.520255772 0.000165322 Fak FBtr0301883|FBtr0086542|FBtr0301882|FBtr0114605|FBtr0086543|FBtr0086544 19430657|19430657|19430657|19430657|19430657|19430657 19431105|19431105|19431105|19431105|19431105|19431105 2R - 19430726 19430783 3'utr Fak FlyBase G25077.1 TTCATCATCAATTCGGGTGTGTTTTAAGACATTTATATTGTGATTTATAGTTTACCAT 28 19430746 0.714967241 10 27 306 0.971428571 1.531478917 0.171428571 0.214285714 0.371428571 28 1 0 34 2R:19430726-19430783 7 Fak FBtr0086543|FBtr0086544|FBtr0301882|FBtr0114605|FBtr0301883|FBtr0086542 19430657|19430657|19430657|19430657|19430657|19430657 19431105|19431105|19431105|19431105|19431105|19431105 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 19430718 19430758 3'utr Fak FlyBase G18958.1 AAGACATTTATATTGTGATTTATAGTTTACCATTATAGGCT 20 19430747 0.587276912 8 18 239 0.923076923 1.079181246 0.230769231 0.2 0.384615385 20 1 1 24 2R:19430718-19430758 7 22.5 296 FBgn0020440 860.4633333 21.11 32.3 0.026148703 1.065845571 0.696594427 1 2 1.5 0.5 dme-miR-277-3p 7mer-m8 TGCATTT 2R 19494075 19494081 + 2R_19494075_19494081_+ 0.571871976 0.498067118 0.534969547 0.052187945 Rep FBtr0086462 19493874 19494125 2R + 19494052 19494090 3'utr Rep FlyBase G17649.1 ATGTTTAAATGTGAGTGTTTCTGTGCATTTTGCTTTGAT 9 19494081 0.966513053 5 9 88 1 1.041392685 0.272727273 0.111111111 0.272727273 9 0 0 11 2R:19494052-19494090 7 Rep FBtr0086462 19493874 19494125 TGCATTT 7mer-m8 dme-miR-277-3p 2R + 19494053 19494093 3'utr Rep FlyBase G13436.1 TGTTTAAATGTGAGTGTTTCTGTGCATTTTGCTTTGATAAA 5 19494069 0.974675023 5 5 57 1 0.903089987 0.125 0.4 0.625 5 0 0 8 2R:19494053-19494093 7 6 297 FBgn0026378 268.7033333 16.93666667 25.81 0.022329459 0.354260972 0.232468036 -6 6 0 0.5 dme-miR-12-5p 7mer-A1 ATACTCA 2R 20261272 20261278 + 2R_20261272_20261278_+ 0.797555212 0.819836881 0.808696046 0.015755541 Hsl FBtr0086270|FBtr0086271|FBtr0086272 20260958|20260958|20260958 20261726|20261726|20261726 2R + 20261240 20261354 3'utr Hsl FlyBase G17690.1 AATTTTATATGACACAGCTTTCTATGTTTTATATACTCACAAACTAAGTATAGGATACGTATGTATGTAGCTTCTAGCATAAGCAAGCCAAGTATGCAAGTATTGGAAGCGTGTA 33 20261267 0.895440853 15 32 291 0.976744186 1.62324929 0.139534884 0.272727273 0.441860465 33 1 0 42 2R:20261240-20261354 7 Hsl FBtr0086272|FBtr0086270|FBtr0086271 20260958|20260958|20260958 20261726|20261726|20261726 ATACTCA 7mer-A1 dme-miR-12-5p 2R + 20261244 20261284 3'utr Hsl FlyBase G13466.2 TTATATGACACAGCTTTCTATGTTTTATATACTCACAAACT 9 20261266 0.635329449 7 8 87 0.928571429 1.113943352 0.071428571 0.444444444 0.642857143 9 1 0 13 2R:20261244-20261284 7 9 298 FBgn0034491 654.3266667 22.12333333 33.89333333 0.013754598 0.406810306 0.265538946 5 6 5.5 0.5 dme-miR-980-3p 6mer2-7 GCAGCT 2R 20261551 20261556 + 2R_20261551_20261556_+ 0.499683989 0.564069022 0.531876505 0.04552707 Hsl FBtr0086270|FBtr0086271|FBtr0086272 20260958|20260958|20260958 20261726|20261726|20261726 2R + 20261386 20261644 3'utr Hsl FlyBase G17691.1 ACGATTAATGCTCTTGAATGCAGGCACACACTCGCTTAAAGCTCTTTGTTGCAAAACTCCCGACTATGTGCCTCATACGGAACGAGTACTTATACACAGTGAATAGAATAATCGCCCATTATTACCCTTGATTTAGAACTCCCCAATGGTATGTCCAGATTTTCTGCAGCTGCGGAGGCTAACAAACTTCAATGTCGGAGATATGCCAAGGTTTTTTGTCTATCCCACGCCAAGGTGTTTGATAAACCACTACTCTTAA 64 20261549 0.813340494 29 59 388 0.935064935 1.380211242 0.233766234 0.125 0.272727273 64 3 2 72 2R:20261386-20261644 6 Hsl FBtr0086272|FBtr0086270|FBtr0086271 20260958|20260958|20260958 20261726|20261726|20261726 GCAGCT 6mer2-7 dme-miR-980-3p 2R + 20261479 20261573 3'utr Hsl FlyBase G13470.1 ACACAGTGAATAGAATAATCGCCCATTATTACCCTTGATTTAGAACTCCCCAATGGTATGTCCAGATTTTCTGCAGCTGCGGAGGCTAACAAACT 23 20261532 0.977059728 9 22 143 0.967741935 1.477121255 0.258064516 0.260869565 0.451612903 23 1 0 30 2R:20261479-20261573 6 13.5 299 FBgn0034491 654.3266667 22.12333333 33.89333333 0.020631896 0.610215459 0.398308419 2 19 10.5 0.5 dme-miR-970-3p 6mer3-8 TCTTAT 2R 20606960 20606965 - 2R_20606960_20606965_- 0.890249064 0.892144746 0.891196905 0.001340392 Hil FBtr0086255|FBtr0086256 20606879|20606879 20607416|20607416 2R - 20606956 20606998 3'utr Hil FlyBase G25250.1 AAACGCAACGTTGCCCCTTATGCATGAACTTTATCTTATACAT 10 20606980 0.778221389 4 10 82 1 1.113943352 0 0.2 0.384615385 10 0 0 13 2R:20606956-20606998 6 Hil FBtr0086255|FBtr0086256 20606879|20606879 20607416|20607416 TCTTAT 6mer3-8 dme-miR-970-3p 2R - 20606957 20606997 3'utr Hil FlyBase G19096.1 AACGCAACGTTGCCCCTTATGCATGAACTTTATCTTATACA 7 20606973 0.863722941 4 5 64 0.75 0.77815125 0 0.142857143 0.25 7 2 0 6 2R:20606957-20606997 6 5.5 300 FBgn0050147 419.7666667 15.18666667 23.17333333 0.013102517 0.362159789 0.237341772 15 8 11.5 0.5 dme-miR-14-3p 8mer-A1 AAGACTGA 2R 20620888 20620895 + 2R_20620888_20620895_+ 0.580461163 0.540580729 0.560520946 0.028199772 CG9945 FBtr0086226|FBtr0086225 20620747|20620747 20620997|20621081 2R + 20620842 20620914 3'utr CG9945 FlyBase G17751.1 ATATTCACCACAGTCGGGCCGGCTGGGATAATTGGTTCTATTAAATAAGACTGAAGAATATGTCACTCACTTG 88 20620887 0.785108672 15 84 616 0.94 1.973127854 0.17 0.125 0.23 88 6 0 94 2R:20620842-20620914 8 CG9945 FBtr0086225 20620747 20621081 AAGACTGA 8mer-A1 dme-miR-14-3p 2R + 20620814 20620907 3'utr CG9945 FlyBase G13517.1 TAGTGGCTTGCCTAAGCGACGCACGAGAATATTCACCACAGTCGGGCCGGCTGGGATAATTGGTTCTATTAAATAAGACTGAAGAATATGTCAC 40 20620886 0.985662323 10 34 282 0.8125 1.414973348 0.140625 0.375 0.609375 40 11 1 52 2R:20620814-20620907 8 42.5 301 FBgn0034527 339.9533333 21.37333333 32.82 0.125017159 1.988459139 1.294942108 1 2 1.5 0.5 dme-miR-34-5p 7mer-A1 ACTGCCA 2R 20827762 20827768 - 2R_20827762_20827768_- 0.645152774 0.715844475 0.680498625 0.04998658 sktl FBtr0071563 20827280 20827991 2R - 20827755 20827789 5'utr sktl FlyBase G25311.1 ATGTGGCGCCCGTGCTAATTGACTGCCAACTAGAC 12 20827771 0.738087096 2 12 68 1 1.079181246 0.416666667 0 0 12 0 0 12 2R:20827755-20827789 7 sktl FBtr0071563 20827280 20827991 ACTGCCA 7mer-A1 dme-miR-34-5p 2R - 20827748 20827796 5'utr sktl FlyBase G19139.1 GAAATTTATGTGGCGCCCGTGCTAATTGACTGCCAACTAGACACGCTAC 11 20827770 0.842636229 3 9 60 0.882352941 0.698970004 0.176470588 0.454545455 0.647058824 11 0 2 15 2R:20827748-20827796 7 11 302 FBgn0016984 2187.616667 79.33666667 122.04 0.005028303 0.138649637 0.090134382 3 2 2.5 0.5 dme-miR-252-5p 7mer-m8 GTACTTA 2R 21123956 21123962 - 2R_21123956_21123962_- 0.525280644 0.584823457 0.555052051 0.042103188 CG4050 FBtr0071637|FBtr0071638 21123733|21123733 21124117|21124117 2R - 21123896 21124048 3'utr CG4050 FlyBase G25375.1 AAGGTTCCCACATTCTGTGAGACATACGGAGTCTGATAAAAATAACACAAAGTGAAGATATGTGGTCCATTCCACACAATTCCGTTGTACTTATTAGTTATTAACGTAATTCTTTGATCATATACTCGTTTTGAAGATATTTATACAATTTTT 144 21123963 0.758965847 33 134 1291 0.934911243 1.596597096 0.142011834 0.166666667 0.289940828 144 8 3 158 2R:21123896-21124048 7 CG4050 FBtr0071637|FBtr0071638 21123733|21123733 21124117|21124117 GTACTTA 7mer-m8 dme-miR-252-5p 2R - 21123903 21124046 3'utr CG4050 FlyBase G19190.1 GGTTCCCACATTCTGTGAGACATACGGAGTCTGATAAAAATAACACAAAGTGAAGATATGTGGTCCATTCCACACAATTCCGTTGTACTTATTAGTTATTAACGTAATTCTTTGATCATATACTCGTTTTGAAGATATTTATAC 95 21123963 0.772790172 26 90 783 0.957142857 1.826074803 0.221428571 0.347368421 0.557142857 95 5 1 134 2R:21123903-21124046 7 57 303 FBgn0020312 364 12.77333333 19.31 0.156593407 4.462421712 2.951838426 1 1 1 0.5 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 21129646 21129653 - 2R_21129646_21129653_- 0.439722944 0.442839002 0.441280973 0.002203415 Magi FBtr0071636|FBtr0342874|FBtr0342873 21129461|21129461|21129461 21129874|21129874|21129874 2R - 21129550 21129695 3'utr Magi FlyBase G25389.1 TTCTTAAGATACCGATCATTATCTTAGGCTAAGTTACTGCTTGTACTTAAACGTTAAGACAATTTGCCAGTTTGTGAGATATTAATCACTTAGCTTAAGCTGTTTTAGACATATACGAATTGTACAAATGTAAAGGACTTTAAATT 98 21129654 0.797334114 26 89 797 0.925 1.443262987 0.066666667 0.183673469 0.333333333 98 6 3 111 2R:21129550-21129695 8 Magi FBtr0071636|FBtr0342874|FBtr0342873 21129461|21129461|21129461 21129874|21129874|21129874 GTACTTAA 8mer-A1 dme-miR-252-5p 2R - 21129526 21129690 3'utr Magi FlyBase G19200.1 AAGATACCGATCATTATCTTAGGCTAAGTTACTGCTTGTACTTAAACGTTAAGACAATTTGCCAGTTTGTGAGATATTAATCACTTAGCTTAAGCTGTTTTAGACATATACGAATTGTACAAATGTAAAGGACTTTAAATTTTTATCTCGAGTATGTATATTATT 92 21129654 0.988612359 24 84 787 0.923076923 1.51851394 0.13986014 0.391304348 0.608391608 92 8 3 132 2R:21129526-21129690 8 43.5 304 FBgn0034590 938.3433333 22.88 35.01 0.046358298 1.901223776 1.242502142 1 1 1 0.5 dme-bantam-3p 6mer3-8 TGATCT 2R 21145453 21145458 + 2R_21145453_21145458_+ 0.872415344 0.59127069 0.731843017 0.198799253 Xbp1 FBtr0310044 21144863 21145750 2R + 21145285 21145523 stop_codon Xbp1 FlyBase G17860.1 AGGCGATCTCCCCGTTGGCCAAATCCCCCGCATTGTCTCTACACTCGGCCACCTCGGACCATGGATACGAGTCCATACTGGGCTCTCCCACATCCGTGGCTCTCACTCTGCCCGCAGATGAGGACGATTTCCCCTGGGAGAGCAACTTTGACGAGCTGTTTCCCAGTTTGATCTGAGTTTTTCAAGCTGAAAACTTCGTTCTGTCTCTCTTTTATTGTTAAGTTTGGCCGGCCGCCGTT 201 21145452 0.90449879 44 195 1596 0.976284585 1.790636962 0.134387352 0.208955224 0.371541502 201 3 3 247 2R:21145285-21145523 6 Xbp1 FBtr0310044 21144863 21145750 TGATCT 6mer3-8 dme-bantam-3p 2R + 21145374 21145473 stop_codon Xbp1 FlyBase G13597.1 ACATCCGTGGCTCTCACTCTGCCCGCAGATGAGGACGATTTCCCCTGGGAGAGCAACTTTGACGAGCTGTTTCCCAGTTTGATCTGAGTTTTTCAAGCTG 79 21145452 0.858162389 16 66 450 0.956896552 1.744292983 0.224137931 0.358974359 0.568965517 78 4 1 111 2R:21145374-21145473 6 44.5 305 FBgn0021872 6665.376667 377.2933333 573.4833333 0.006676292 0.117945365 0.077595978 1 1 1 0.5 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 21148649 21148654 - 2R_21148649_21148654_- 0.507917995 0.517598866 0.51275843 0.00684543 CG30389 FBtr0310423 21148263 21149340 2R - 21148613 21148705 3'utr CG30389 FlyBase G25407.1 AAGCCAAGGAAGTACCCCCCAAAATCCTATGTAAAATGTTTTCTATTTTTTACCAAACGCTGTGACAGAGTTGGACCAACCGAAGTGATGGCC 22 21148656 0.999947989 9 20 133 0.916666667 1.342422681 0 0.090909091 0.166666667 22 2 0 22 2R:21148613-21148705 6 CG30389 FBtr0310423 21148263 21149340 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 21148599 21148661 3'utr CG30389 FlyBase G19218.1 ATTTTTTACCAAACGCTGTGACAGAGTTGGACCAACCGAAGTGATGGCCATGATCTTGGGGAG 15 21148656 0.97120576 7 13 74 0.869565217 1.301029996 0 0.533333333 0.695652174 15 3 0 20 2R:21148599-21148661 6 13 306 FBgn0050389 2516.626667 66.38 102.5 0.005165645 0.195842121 0.126829268 2 2 2 0.5 dme-miR-304-5p 8mer-A1 TGAGATTA 2R 21149249 21149256 - 2R_21149249_21149256_- 0.516145669 0.530956966 0.523551317 0.010473171 CG30389 FBtr0310423|FBtr0071632|FBtr0071633|FBtr0330235 21148263|21148731|21148731|21148731 21149340|21149340|21149340|21149340 2R - 21149238 21149283 stop_codon CG30389 FlyBase G25409.1 TCGCACATGCATCTGCGACGACAAGTTTGAGATTATTATACTTTAT 65 21149257 0.780796593 3 63 489 0.958333333 1.537819095 0.347222222 0.107692308 0.194444444 65 2 1 69 2R:21149238-21149283 8 CG30389 FBtr0310423|FBtr0330235|FBtr0071633|FBtr0071632 21148263|21148731|21148731|21148731 21149340|21149340|21149340|21149340 TGAGATTA 8mer-A1 dme-miR-304-5p 2R - 21149238 21149284 stop_codon CG30389 FlyBase G19221.1 CTCGCACATGCATCTGCGACGACAAGTTTGAGATTATTATACTTTAT 34 21149257 0.769324624 4 33 253 0.981132075 1.716003344 0.471698113 0.411764706 0.622641509 34 1 0 52 2R:21149238-21149284 8 49.5 307 FBgn0050389 2516.626667 66.38 102.5 0.019669187 0.745706538 0.482926829 1 1 1 0.5 dme-miR-14-3p 6mer2-7 AGACTG 2R 21336209 21336214 + 2R_21336209_21336214_+ 0.948628489 0.940001004 0.944314747 0.006100564 dom FBtr0071604 21336064 21336986 2R + 21335998 21336277 stop_codon dom FlyBase G18016.1 CTAGCTCATCAGCAGCAGTCAGTGGTGTTTCGGGAGGAAATGCCTCCTCGAGCGGAACAGCCAGGTGATGATGTTCACTATCATACCTCAGTCAGTATTATCAGCTGTGTGTGTTGTGTGCGTTTTAGTGGGCGACTAATTATCTGTGGGGAGACGGGTCCTTCCCCGGCTGTTACTGCTGCCAGGCGACTGATGCATAATGAGTATTTATAGACTGTAACAAGTTTCCTTCTATCGTATGAGATAAGTTAGTTAGGCGCCGGAACCCACGCTAGAATCT 341 21336207 0.983059955 42 324 2466 0.955607477 2.310693312 0.119158879 0.211143695 0.371495327 341 18 1 409 2R:21335998-21336277 6 dom FBtr0071604 21336064 21336986 AGACTG 6mer2-7 dme-miR-14-3p 2R + 21336123 21336299 3'utr dom FlyBase G13724.2 TAGTGGGCGACTAATTATCTGTGGGGAGACGGGTCCTTCCCCGGCTGTTACTGCTGCCAGGCGACTGATGCATAATGAGTATTTATAGACTGTAACAAGTTTCCTTCTATCGTATGAGATAAGTTAGTTAGGCGCCGGAACCCACGCTAGAATCTAGAATAACAAATTAAACTTCAT 176 21336207 0.888485132 26 162 1215 0.922509225 1.795880017 0.084870849 0.392045455 0.605166052 176 18 3 250 2R:21336123-21336299 6 193 308 FBgn0020306 6085.363333 78.23 120.3133333 0.031715444 2.467084239 1.604144733 2 2 2 0.5 dme-miR-13b-2-5p 6mer3-8 TTTGAC 2R 21605708 21605713 - 2R_21605708_21605713_- 0.738329557 0.901549863 0.81993971 0.115414181 CG10433 FBtr0071690|FBtr0344882|FBtr0071691 21605674|21605674|21605674 21606071|21606071|21606325 2R - 21605679 21605797 3'utr CG10433 FlyBase G25520.1 TTAACTATATGTATATTAATTATATTGTACGAATAATTTTGTATGACATCTTAAGAGCCCCAAATCTACCCACAATGTGAAATATTTGACTGCTTCCAATAAATGCATTGTAAATATTT 53 21605712 0.983568705 15 51 406 0.942028986 1.812913357 0.507246377 0.264150943 0.434782609 53 4 0 65 2R:21605679-21605797 6 CG10433 FBtr0071691|FBtr0344882|FBtr0071690 21605674|21605674|21605674 21606325|21606071|21606071 TTTGAC 6mer3-8 dme-miR-13b-2-5p 2R - 21605676 21605759 3'utr CG10433 FlyBase G19305.1 TTGTATGACATCTTAAGAGCCCCAAATCTACCCACAATGTGAAATATTTGACTGCTTCCAATAAATGCATTGTAAATATTTTCC 44 21605704 0.831555834 13 42 297 0.970149254 1.511883361 0.447761194 0.363636364 0.582089552 44 1 1 65 2R:21605676-21605759 6 39 309 FBgn0034638 6526.64 846.7433333 1285.906667 0.00597551 0.046058821 0.030328795 -1 -9 -5 0.5 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG 2R 21615068 21615074 - 2R_21615068_21615074_- 0.606961967 0.609284891 0.608123429 0.001642538 CG18870 FBtr0071688|FBtr0345664 21614761|21613843 21615593|21615593 2R - 21615043 21615102 3'utr CG18870 FlyBase G25533.1 AAGACTGGGCCGAGCATTCCACATAGTTGTACCTGTTTCTGTACTGCATAGATATGTATA 155 21615075 0.744084706 10 148 1397 0.948186528 2.26245109 0.062176166 0.2 0.357512953 155 10 0 183 2R:21615043-21615102 7 CG18870 FBtr0345664|FBtr0071688 21613843|21614761 21615593|21615593 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" 2R - 21615044 21615102 3'utr CG18870 FlyBase G19312.1 AAGACTGGGCCGAGCATTCCACATAGTTGTACCTGTTTCTGTACTGCATAGATATGTAT 113 21615075 0.901522729 8 109 993 0.957575758 1.897627091 0.096969697 0.336283186 0.545454545 113 6 1 158 2R:21615044-21615102 7 129.5 310 FBgn0042180 173 9.316666667 14.31333333 0.748554913 13.89982111 9.047508151 1 1 1 0.5 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA 2R 21619648 21619653 - 2R_21619648_21619653_- 0.883559115 0.750913906 0.817236511 0.09379432 PTP-ER FBtr0071686 21619319 21620046 2R - 21619601 21619677 3'utr PTP-ER FlyBase G25548.2 AATTATTATACCCTACCTTACCTTACCAAAACCATACCTTACCATAAAGATGCGCATCTATATATGACTCGCGACGT 26 21619627 0.861228897 10 22 159 0.8 0.970036777 0 0.346153846 0.514285714 26 5 2 28 2R:21619601-21619677 6 PTP-ER FBtr0071686 21619319 21620046 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" 2R - 21619612 21619673 3'utr PTP-ER FlyBase G19320.1 ATTATACCCTACCTTACCTTACCAAAACCATACCTTACCATAAAGATGCGCATCTATATATG 17 21619660 0.796097938 7 16 101 0.952380952 1.301029996 0 0.235294118 0.380952381 17 1 0 20 2R:21619612-21619673 6 12 311 FBgn0016641 329.97 7.83 11.97333333 0.036366942 1.53256705 1.002227171 -26 7 -9.5 0.5 dme-miR-33-5p 8mer-A1 CAATGCAA 2R 21657623 21657630 + 2R_21657623_21657630_+ 0.368089411 0.592963793 0.480526602 0.159010213 CG10082 FBtr0071661 21657072 21657935 2R + 21657598 21657679 3'utr CG10082 FlyBase G18156.1 GATTTTATACCTAGCCATTACAATTCAATGCAAAATGACAAAGCGATAGAGCGTAATCATCAGTATTTCGTTGTATGTATCT 28 21657622 0.859954774 5 28 207 1 1.491361694 0.612903226 0.107142857 0.193548387 28 0 0 31 2R:21657598-21657679 8 CG10082 FBtr0071661 21657072 21657935 CAATGCAA 8mer-A1 dme-miR-33-5p 2R + 21657608 21657670 3'utr CG10082 FlyBase G13821.1 CTAGCCATTACAATTCAATGCAAAATGACAAAGCGATAGAGCGTAATCATCAGTATTTCGTTG 23 21657622 0.800931886 3 22 138 0.939393939 1.491361694 0.575757576 0.304347826 0.515151515 23 2 0 31 2R:21657608-21657670 8 14 312 FBgn0034644 417.2733333 12.82666667 19.61 0.03355115 1.091476091 0.713921469 1 1 1 0.5 dme-miR-11-3p 7mer-m1 TGTGATG 2R 21692013 21692019 + 2R_21692013_21692019_+ 0.50548193 0.479081367 0.492281648 0.018667973 CG42496 FBtr0300625|FBtr0342958 21691979|21691979 21692764|21692764 2R + 21691973 21692044 start_codon CG42496 FlyBase G18183.1 AGCAATAGCCGGCATTGTGAGCCATGAAACCCGAACGTAATGTGATGATAGCGGCCACCGGAAGTGTGGCCA 45 21692021 0.972963913 9 33 193 0.759259259 1.010723865 0.518518519 0.177777778 0.314814815 45 10 3 41 2R:21691973-21692044 7 CG42496 FBtr0342958|FBtr0300625 21691979|21691979 21692764|21692764 TGTGATG 7mer-m1 dme-miR-11-3p 2R + 21691977 21692058 start_codon CG42496 FlyBase G13838.1 ATAGCCGGCATTGTGAGCCATGAAACCCGAACGTAATGTGATGATAGCGGCCACCGGAAGTGTGGCCACCATTAAGTTAGCC 36 21692021 0.955417194 5 31 148 0.928571429 1.414973348 0.5 0.388888889 0.607142857 36 3 1 52 2R:21691977-21692058 7 35 313 FBgn0260222 113.5 13.05 20.08333333 0.308370044 2.681992337 1.742738589 -8 -8 -8 0.5 dme-miR-308-3p 7mer-m1 TGTGATT 2R 21975944 21975950 + 2R_21975944_21975950_+ 0.489897272 0.447726285 0.468811779 0.0298194 CG9304 FBtr0071726|FBtr0345537 21975523|21975523 21976196|21976386 2R + 21975913 21975982 3'utr CG9304 FlyBase G18218.1 AGCGAGTGCAAGAATGCACCAGAGATTGTTGTGTGATTTTATGTAATATGCTTGAATTTATAATTAGTTT 51 21975942 0.991628349 10 50 544 0.983870968 1.785329835 0.064516129 0.196078431 0.338709677 51 1 0 61 2R:21975913-21975982 7 CG9304 FBtr0071726|FBtr0345537 21975523|21975523 21976196|21976386 TGTGATT 7mer-m1 dme-miR-308-3p 2R + 21975911 21975964 3'utr CG9304 FlyBase G13870.1 AGAGCGAGTGCAAGAATGCACCAGAGATTGTTGTGTGATTTTATGTAATATGCT 32 21975942 0.991411445 8 31 336 0.979166667 1.672097858 0.125 0.40625 0.604166667 32 1 0 47 2R:21975911-21975964 7 40 314 FBgn0034674 656.3166667 28.69666667 44.06 0.06094619 1.393890115 0.907852928 2 2 2 0.5 dme-miR-282-5p 7mer-A1 GAGGCTA 2R 22085548 22085554 + 2R_22085548_22085554_+ 0.684806595 0.718921383 0.701863989 0.024122806 Synj FBtr0071757|FBtr0308239 22084902|22084902 22085767|22085767 2R + 22085535 22085567 3'utr Synj FlyBase G18265.1 ATTCCGTCAATTTGAGGCTACATCCGGATTTCT 8 22085546 0.734100956 3 8 51 1 1 0 0.125 0.3 8 0 0 10 2R:22085535-22085567 7 Synj FBtr0071757|FBtr0308239 22084902|22084902 22085767|22085767 GAGGCTA 7mer-A1 dme-miR-282-5p 2R + 22085519 22085563 3'utr Synj FlyBase G13904.1 GTTAAACTATCGTTGTATTCCGTCAATTTGAGGCTACATCCGGAT 13 22085546 0.96545828 4 12 85 1 1.255272505 0.111111111 0.307692308 0.5 13 0 0 18 2R:22085519-22085563 7 9.5 315 FBgn0034691 628.3666667 16.23 24.76333333 0.015118561 0.585335798 0.383631714 2 2 2 0.5 dme-miR-11-3p 7mer-m1 TGTGATG 2R 22298338 22298344 - 2R_22298338_22298344_- 0.49151758 0.509028718 0.500273149 0.012382218 wdp FBtr0071851|FBtr0071852|FBtr0071849|FBtr0071850|FBtr0342984 22298212|22298212|22298212|22298212|22298212 22298905|22298905|22298905|22298905|22298905 2R - 22298329 22298440 3'utr wdp FlyBase G25682.1 TGAATTCAGTCGTCGAGTGCAAAATATCAATGAGCCGGGGAAAGCGGAAAGGAGTTAACTCTTTTGCATGATAAATGCTATCAATCTGCATCTGCATGTGATGTTCACACCA 19 22298353 0.995783327 9 19 133 1 1.342422681 0.090909091 0.157894737 0.272727273 19 0 0 22 2R:22298329-22298440 7 wdp FBtr0071850|FBtr0342984|FBtr0071852|FBtr0071849|FBtr0071851 22298212|22298212|22298212|22298212|22298212 22298905|22298905|22298905|22298905|22298905 TGTGATG 7mer-m1 dme-miR-11-3p 2R - 22298329 22298410 3'utr wdp FlyBase G19428.1 TGAGCCGGGGAAAGCGGAAAGGAGTTAACTCTTTTGCATGATAAATGCTATCAATCTGCATCTGCATGTGATGTTCACACCA 12 22298351 0.980695754 7 11 72 0.916666667 1.342422681 0.166666667 0.75 0.875 12 2 0 22 2R:22298329-22298410 7 8 316 FBgn0034718 26.33333333 1.036666667 1.556666667 0.303797468 7.717041801 5.139186296 9 7 8 0.5 dme-miR-33-5p 6mer3-8 CAATGC 2R 22378402 22378407 + 2R_22378402_22378407_+ 0.87097965 0.672082369 0.771531009 0.140641559 Rtf1 FBtr0342988 22377752 22378484 2R + 22378343 22378467 3'utr Rtf1 FlyBase G18367.1 ATTGAAAGGGTTATATAAGACTCATTCAAGCGAGTATGTATCCGTTGGTTGTAACCGTTCAATGCTGTATTAGATTAAGGCAAAATTCATCAGTTGTAGCAACAGCTTTCATATACTTAAATATA 34 22378406 0.982121753 17 33 259 0.97826087 1.653212514 0.282608696 0.264705882 0.456521739 34 1 0 45 2R:22378343-22378467 6 Rtf1 FBtr0342988 22377752 22378484 CAATGC 6mer3-8 dme-miR-33-5p 2R + 22378378 22378464 3'utr Rtf1 FlyBase G13981.1 ATGTATCCGTTGGTTGTAACCGTTCAATGCTGTATTAGATTAAGGCAAAATTCATCAGTTGTAGCAACAGCTTTCATATACTTAAAT 16 22378405 0.912420192 8 16 124 1 1.301029996 0.15 0.25 0.4 16 0 0 20 2R:22378378-22378464 6 12.5 317 FBgn0034722 664.7666667 27.26666667 41.77666667 0.01880359 0.458435208 0.299210085 -4 -3 -3.5 0.5 dme-miR-1008-3p 7mer-A1 GCTGTGA 2R 22600273 22600279 + 2R_22600273_22600279_+ 0.590387939 0.601298141 0.59584304 0.007714676 CG4269 FBtr0343001|FBtr0071854|FBtr0343000 22600206|22600206|22600206 22600695|22600336|22600336 2R + 22600252 22600305 3'utr CG4269 FlyBase G18424.1 TTCGCGCTCCTGCATGGATTGGCTGTGATAAACCCACTGTATTTATTTAAATTA 252 22600271 0.767058443 10 232 1885 0.927007299 1.404833717 0.00729927 0.079365079 0.153284672 252 11 9 254 2R:22600252-22600305 7 CG4269 FBtr0071854|FBtr0343000|FBtr0343001 22600206|22600206|22600206 22600336|22600336|22600695 GCTGTGA 7mer-A1 dme-miR-1008-3p 2R + 22600252 22600306 3'utr CG4269 FlyBase G14017.1 TTCGCGCTCCTGCATGGATTGGCTGTGATAAACCCACTGTATTTATTTAAATTAT 137 22600271 0.984321713 8 121 972 0.868932039 1.298610522 0.038834951 0.350364964 0.567961165 137 19 8 179 2R:22600252-22600306 7 192.5 318 FBgn0034741 15.34666667 2.056666667 3.076666667 12.54344049 93.59805511 62.56771398 2 2 2 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 22685402 22685408 - 2R_22685402_22685408_- 0.754498265 0.768127135 0.7613127 0.009637017 Ppa FBtr0343014|FBtr0343014|FBtr0343014 22684953|22684953|22684953 22687104|22687104|22687104 2R - 22685364 22685457 3'utr Ppa FlyBase G25792.1 AGAGAAGGTAACGATTGAAAAGAATACGCGAATTAATTCTTTTTTCTATTGTGATATAAAATGTATTGTATAAAAAAGAACACATAAGCAAGCA 60 22685409 0.993571404 13 51 628 0.844155844 0.967815317 0.064935065 0.233333333 0.402597403 60 6 6 65 2R:22685364-22685457 7 Ppa FBtr0343014|FBtr0343014|FBtr0343014 22684953|22684953|22684953 22687104|22687104|22687104 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 22685361 22685457 3'utr Ppa FlyBase G19514.1 AGAGAAGGTAACGATTGAAAAGAATACGCGAATTAATTCTTTTTTCTATTGTGATATAAAATGTATTGTATAAAAAAGAACACATAAGCAAGCAGCA 49 22685409 0.984489713 12 45 482 0.905405405 1.047923552 0.094594595 0.408163265 0.608108108 49 2 5 67 2R:22685361-22685457 7 41.5 319 FBgn0020257 1130.93 34.32 53.00666667 0.036695463 1.209207459 0.782920387 1 1 1 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 2R 22693464 22693471 - 2R_22693464_22693471_- 0.419151928 0.438869429 0.429010678 0.013942378 robo FBtr0343013|FBtr0343013|FBtr0343013|FBtr0071922|FBtr0071922|FBtr0071922 22692522|22692522|22692522|22692522|22692522|22692522 22694552|22694552|22694552|22694552|22694552|22694552 2R - 22693422 22693574 3'utr robo FlyBase G25805.1 CGAACCAACCCCAGTTGTCCGTTCCGTTGTCCTGTCCCTGTGCAGATCCCTCCAAGACACAATGTTTTCTACAATCTTGCATTTTGAAAAGTCTAAAATGTACCTGTGATATAACCCCATTATACATTATAGTATTTTAATAATTTTTATATT 358 22693475 0.98091123 24 335 2417 0.934831461 2.619093331 0.139325843 0.187150838 0.346067416 358 29 0 416 2R:22693422-22693574 8 robo FBtr0343013|FBtr0343013|FBtr0343013|FBtr0071922|FBtr0071922|FBtr0071922 22692522|22692522|22692522|22692522|22692522|22692522 22694552|22694552|22694552|22694552|22694552|22694552 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 22693434 22693572 3'utr robo FlyBase G19525.1 AACCAACCCCAGTTGTCCGTTCCGTTGTCCTGTCCCTGTGCAGATCCCTCCAAGACACAATGTTTTCTACAATCTTGCATTTTGAAAAGTCTAAAATGTACCTGTGATATAACCCCATTATACATTATAGTATTTTAAT 205 22693476 0.980634727 17 190 1353 0.918918919 1.957447649 0.094594595 0.326829268 0.533783784 205 22 2 272 2R:22693434-22693572 8 246.5 320 FBgn0005631 940.4766667 16.89666667 25.92333333 0.262101133 14.58867627 9.508808024 4 5 4.5 0.5 dme-miR-252-5p 8mer-A1 GTACTTAA 2R 22694136 22694143 - 2R_22694136_22694143_- 0.344062029 0.350174714 0.347118372 0.004322332 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 2R - 22694112 22694297 3'utr robo FlyBase G25808.1 ACTTGTCACAATCATGGGGGCATTGTGCAGCTTTAGCAATTACGAATTTTTCCATTATCACATCTACCAGCGTAGAGACTCATAGACAGGCACAGTGCCCCTTCCCCATCCATGCACCACAGAAATGTTTCCCCAATGGGAAACGAGAACCTTTGTACTTAAGAGACGCGAGTGCTGTACGATAGA 368 22694144 0.961475004 18 354 1902 0.954545455 1.998912904 0.277511962 0.116847826 0.222488038 368 16 3 399 2R:22694112-22694297 8 robo FBtr0343013|FBtr0071922 22692522|22692522 22694552|22694552 GTACTTAA 8mer-A1 dme-miR-252-5p 2R - 22694116 22694168 3'utr robo FlyBase G19530.1 TCCCCAATGGGAAACGAGAACCTTTGTACTTAAGAGACGCGAGTGCTGTACGA 144 22694144 0.648028922 7 141 760 0.957345972 2.305351369 0.383886256 0.354166667 0.559241706 144 9 0 202 2R:22694116-22694168 8 188.5 321 FBgn0005631 940.4766667 16.89666667 25.92333333 0.200430278 11.15604656 7.27144143 1 1 1 0.5 dme-miR-1006-3p 7mer-A1 GAATTTA 2R 22935330 22935336 - 2R_22935330_22935336_- 0.746813891 0.753946342 0.750380117 0.005043368 CG3800 FBtr0071994|FBtr0303464 22934567|22934567 22936014|22936014 2R - 22935271 22935378 5'utr CG3800 FlyBase G25903.1 TAATTATACCTATATGATTATATGATTATGCTGCAAGTGTTTGAATTTACTAATTACATTATAACGAATGGAATGAAACTATATAAGATTATATAAAGAAAAATACCT 26 22935338 0.986494315 16 23 195 0.892857143 1.397940009 0.178571429 0.076923077 0.142857143 26 3 0 25 2R:22935271-22935378 7 CG3800 FBtr0071994|FBtr0303464 22934567|22934567 22936014|22936014 GAATTTA 7mer-A1 dme-miR-1006-3p 2R - 22935312 22935372 5'utr CG3800 FlyBase G19604.2 TACCTATATGATTATATGATTATGCTGCAAGTGTTTGAATTTACTAATTACATTATAACGA 19 22935339 0.901070562 9 14 164 0.84375 0.954242509 0.28125 0.578947368 0.75 19 3 2 27 2R:22935312-22935372 7 12.5 322 FBgn0034802 11327.54667 555.1 855.97 0.001103505 0.022518465 0.014603316 2 3 2.5 0.5 dme-bantam-3p 6mer3-8 TGATCT 2R 23071694 23071699 + 2R_23071694_23071699_+ 0.52376369 0.532997594 0.528380642 0.006529353 l(2)k09913 FBtr0071960|FBtr0343188|FBtr0343192|FBtr0071959|FBtr0343191|FBtr0071961|FBtr0343189|FBtr0343190|FBtr0071958 23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554 23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875 2R + 23071539 23071725 stop_codon l(2)k09913 FlyBase G18510.1 AGCGCGCCAAGTTGTAGGTGTCTCTAACGAGGAGCGGCTGATCAGTTCAGTGATATACATTTATTCAAGAATCAATGCGATTATGATTTTACCCTAGTTGCTAAGACCTAAAGATTAACGAGCAATGTAAAACCAATGTCCTCTTTGAATGATTATGATCTGTGTGTCTCTCGCGAGGCAGAATCTT 284 23071694 0.986472032 37 272 2343 0.964391691 2.034762106 0.228486647 0.151408451 0.284866469 284 10 2 325 2R:23071539-23071725 6 l(2)k09913 FBtr0071961|FBtr0343191|FBtr0343190|FBtr0071958|FBtr0343189|FBtr0343188|FBtr0071960|FBtr0071959|FBtr0343192 23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554|23071554 23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875|23071875 TGATCT 6mer3-8 dme-bantam-3p 2R + 23071564 23071722 3'utr l(2)k09913 FlyBase G14081.1 AACGAGGAGCGGCTGATCAGTTCAGTGATATACATTTATTCAAGAATCAATGCGATTATGATTTTACCCTAGTTGCTAAGACCTAAAGATTAACGAGCAATGTAAAACCAATGTCCTCTTTGAATGATTATGATCTGTGTGTCTCTCGCGAGGCAGAAT 168 23071694 0.893394118 23 159 1351 0.940677966 2.346352974 0.266949153 0.297619048 0.5 168 14 0 222 2R:23071564-23071722 6 112 323 FBgn0021979 722.6 59.48666667 89.72333333 0.154995848 1.882774852 1.248281755 0 0 0 0.5 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 23356109 23356116 + 2R_23356109_23356116_+ 0.525054522 0.543064646 0.534059584 0.012735064 Rpi FBtr0301852|FBtr0305675 23356078|23356078 23356192|23356441 2R + 23356082 23356152 3'utr Rpi FlyBase G18526.1 CTTGGGCGGAGTTGGGGGAGCGCTTTTTGCATTTATGTTTCACCAAGTTGTTCCTTAAATTTTAGGTTTGC 41 23356108 0.74232017 10 41 406 1 1.698970004 0.08 0.195121951 0.34 41 0 0 50 2R:23356082-23356152 8 Rpi FBtr0305675 23356078 23356441 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 23356078 23356153 stop_codon Rpi FlyBase G14095.1 AGTTCTTGGGCGGAGTTGGGGGAGCGCTTTTTGCATTTATGTTTCACCAAGTTGTTCCTTAAATTTTAGGTTTGCC 41 23356108 0.736360172 10 40 419 1 1.785329835 0.098360656 0.317073171 0.540983607 41 0 0 61 2R:23356078-23356153 8 27 324 FBgn0050410 217.7933333 24.45 37.62 0.123970737 1.104294479 0.717703349 1 1 1 0.5 dme-miR-317-3p 8mer-A1 TGTGTTCA 2R 23846904 23846911 + 2R_23846904_23846911_+ 0.590688427 0.587349643 0.589019035 0.002360888 CG5554 FBtr0343273|FBtr0072126 23846588|23846588 23847024|23847024 2R + 23846848 23846924 3'utr CG5554 FlyBase G18643.1 AACTAAATGTAACTTTAGTCGTATATTTTTACCTTTTGCCAAGCATTTTTGTATTTTGTGTTCAACTTGGTTTCCAC 46 23846903 0.993718318 9 45 576 0.966666667 1.763427994 0.15 0.239130435 0.416666667 46 2 0 58 2R:23846848-23846924 8 CG5554 FBtr0343273|FBtr0072126 23846588|23846588 23847024|23847024 TGTGTTCA 8mer-A1 dme-miR-317-3p 2R + 23846864 23846925 3'utr CG5554 FlyBase G14184.1 AGTCGTATATTTTTACCTTTTGCCAAGCATTTTTGTATTTTGTGTTCAACTTGGTTTCCACA 31 23846903 0.711980043 6 30 344 0.973684211 1.568201724 0.236842105 0.193548387 0.342105263 31 1 0 37 2R:23846864-23846925 8 33 325 FBgn0034914 870.3333333 68.06 104.0466667 0.037916507 0.484866294 0.317165375 1 1 1 0.5 dme-miR-277-3p 7mer-A1 GCATTTA 2R 23897022 23897028 - 2R_23897022_23897028_- 0.729197679 0.765417012 0.747307345 0.025610913 CG5339 FBtr0072220 23896894 23897117 2R - 23896994 23897098 3'utr CG5339 FlyBase G26146.1 AAAAAGAACCCTTCTGAAGTTATTGTAACCGTTTTCCTCGTAGAGTTAAGTGGCTGCATTGAGAAACTGAGCATTTATACTTATTACAAATGTAGGCTATCAACT 30 23897031 0.957571383 15 29 229 0.96969697 1.505149978 0.242424242 0.1 0.181818182 30 1 0 32 2R:23896994-23897098 7 CG5339 FBtr0072220 23896894 23897117 GCATTTA 7mer-A1 dme-miR-277-3p 2R - 23896996 23897098 3'utr CG5339 FlyBase G19773.1 AAAAAGAACCCTTCTGAAGTTATTGTAACCGTTTTCCTCGTAGAGTTAAGTGGCTGCATTGAGAAACTGAGCATTTATACTTATTACAAATGTAGGCTATCAA 14 23897031 0.978847474 9 14 97 1 1.301029996 0.1 0.285714286 0.5 14 0 0 20 2R:23896996-23897098 7 10.5 326 FBgn0034925 184.9866667 18.32333333 27.93333333 0.056760848 0.57303984 0.375894988 3 3 3 0.5 dme-miR-317-3p 6mer3-8 TGTGTT 2R 23928916 23928921 - 2R_23928916_23928921_- 0.995048568 0.845127105 0.920087837 0.106010509 Ca-P60A FBtr0072216 23927480 23929230 2R - 23928902 23928945 3'utr Ca-P60A FlyBase G26166.1 CGTATACCCTACCCTATAGATATCTGTGTTTGTATATTACTATA 17 23928923 0.780194526 7 15 169 0.916666667 1.342422681 0.041666667 0.411764706 0.583333333 17 2 0 22 2R:23928902-23928945 6 Ca-P60A FBtr0072216 23927480 23929230 TGTGTT 6mer3-8 dme-miR-317-3p 2R - 23928906 23928945 3'utr Ca-P60A FlyBase G19788.2 CGTATACCCTACCCTATAGATATCTGTGTTTGTATATTAC 12 23928915 0.680136648 5 9 110 0.833333333 1.176091259 0 0.333333333 0.555555556 12 3 0 15 2R:23928906-23928945 6 12.5 327 FBgn0263006 3996.03 108.55 166.07 0.003128105 0.115154307 0.075269465 2 -6 -2 0.5 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 23946865 23946872 + 2R_23946865_23946872_+ 0.455931123 0.592782318 0.524356721 0.096768412 Galphas FBtr0072142|FBtr0343279|FBtr0072143|FBtr0072144|FBtr0301411 23946746|23946746|23946746|23946746|23946746 23946936|23946936|23946936|23946936|23946936 2R + 23946851 23946892 3'utr Galphas FlyBase G18723.1 AACAAAAAATTCGCTGCATTTAGATCTGGTATGACCTTTCAC 7 23946863 0.856928223 6 6 45 0.933333333 1.146128036 0.133333333 0.571428571 0.8 7 1 0 14 2R:23946851-23946892 8 Galphas FBtr0072144|FBtr0072143|FBtr0343279|FBtr0072142|FBtr0301411 23946746|23946746|23946746|23946746|23946746 23946936|23946936|23946936|23946936|23946936 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 23946854 23946881 3'utr Galphas FlyBase G14247.1 AAAAAATTCGCTGCATTTAGATCTGGTA 5 23946860 0.837023196 3 4 34 0.666666667 0.77815125 0 0.4 0.666666667 5 3 0 6 2R:23946854-23946881 8 5.5 328 FBgn0001123 1422.84 105.62 161.5433333 0.003865508 0.052073471 0.034046592 2 5 3.5 0.5 dme-miR-34-5p 6mer2-7 ACTGCC 2R 24031590 24031595 - 2R_24031590_24031595_- 0.624751478 0.666966004 0.645858741 0.029850159 Chi FBtr0072192|FBtr0072191 24031536|24031536 24031803|24031803 2R - 24031578 24031625 3'utr Chi FlyBase G26246.1 AAACCGTAGGATACTTCTGTTCTTGTCTTGACTGCCTTGCAAAGTACT 29 24031599 0.650413198 8 26 273 0.921052632 1.544068044 0.078947368 0.24137931 0.421052632 29 3 0 35 2R:24031578-24031625 6 Chi FBtr0072192|FBtr0072191 24031536|24031536 24031803|24031803 ACTGCC 6mer2-7 dme-miR-34-5p 2R - 24031560 24031613 3'utr Chi FlyBase G19846.1 ACTTCTGTTCTTGTCTTGACTGCCTTGCAAAGTACTTAATGTGTTGTTTTAGTA 25 24031600 0.970228801 9 23 252 0.897435897 1.544068044 0.179487179 0.44 0.641025641 25 4 0 35 2R:24031560-24031613 6 25.5 329 FBgn0013764 624.9866667 35.29333333 53.78666667 0.04080087 0.722516056 0.474095191 4 5 4.5 0.5 dme-miR-305-5p 7mer-m1 GTACAAT 2R 24044373 24044379 + 2R_24044373_24044379_+ 0.733410928 0.764459453 0.748935191 0.021954676 IntS1 FBtr0072168 24044337 24044458 2R + 24044344 24044384 3'utr IntS1 FlyBase G18814.2 CGGTCTATAAGTTAGAACCGTCATCATATGTACAATGTAAT 10 24044369 0.597909211 5 9 57 1 1.113943352 0.153846154 0.3 0.461538462 10 0 0 13 2R:24044344-24044384 7 IntS1 FBtr0072168 24044337 24044458 GTACAAT 7mer-m1 dme-miR-305-5p 2R + 24044353 24044384 3'utr IntS1 FlyBase G14309.1 AGTTAGAACCGTCATCATATGTACAATGTAAT 8 24044368 0.640308137 3 8 54 1 1.041392685 0.090909091 0.25 0.454545455 8 0 0 11 2R:24044353-24044384 7 8 330 FBgn0034964 864.9966667 16.29666667 25.03666667 0.009248591 0.490897934 0.319531354 4 5 4.5 0.5 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 2R 24414289 24414295 + 2R_24414289_24414295_+ 0.797873899 0.762594748 0.780234324 0.024946162 CG45068 FBtr0344430 24414110 24415295 2R + 24414258 24414325 3'utr CG45068 FlyBase G19004.1 GTGCACAGCAAACTTGAAATTTTGAATATGGCTAGTCATTACCAAATATTCCCTTGATCTTAAGATTC 42 24414296 0.973008794 9 36 333 0.905660377 1.204119983 0.018867925 0.142857143 0.320754717 42 3 2 48 2R:24414258-24414325 7 CG45068 FBtr0344430 24414110 24415295 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 2R + 24414223 24414318 3'utr CG45068 FlyBase G14463.1 TTGTTAAGCTTGACTTCTGTAAACATTCCCAATATGTGCACAGCAAACTTGAAATTTTGAATATGGCTAGTCATTACCAAATATTCCCTTGATCTT 34 24414296 0.984861332 13 30 262 0.879310345 1.707570176 0.051724138 0.5 0.706896552 34 7 0 51 2R:24414223-24414318 7 30.5 331 FBgn0266438 77.02666667 2.906666667 4.47 0.395966765 10.49311927 6.823266219 -7 -7 -7 0.5 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 2R 24558909 24558915 + 2R_24558909_24558915_+ 0.557472355 0.460998279 0.509235317 0.06821749 ITP FBtr0300186|FBtr0290219 24558137|24556424 24558961|24558961 2R + 24558890 24558934 3'utr ITP FlyBase G19035.1 TAATTTAAACTTGTTTGGATCTAGTCGTAAAATATAAATAAAGAT 51 24558907 0.626572594 12 43 451 0.877192982 1.096910013 0.01754386 0.098039216 0.192982456 51 4 3 50 2R:24558890-24558934 7 ITP FBtr0290219|FBtr0300186 24556424|24558137 24558961|24558961 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 2R + 24558886 24558938 3'utr ITP FlyBase G14485.1 TAATTAATTTAAACTTGTTTGGATCTAGTCGTAAAATATAAATAAAGATTGTA 31 24558904 0.644614109 12 25 267 0.840909091 1.267171728 0.113636364 0.35483871 0.545454545 31 6 1 37 2R:24558886-24558938 7 39.5 332 FBgn0035023 1304.81 56.75666667 87.48 0.030272607 0.695953486 0.451531779 2 5 3.5 0.5 dme-miR-79-3p 7mer-A1 AGCTTTA 2R 24788132 24788138 - 2R_24788132_24788138_- 0.457484374 0.469635757 0.463560065 0.008592337 Reg-5 FBtr0072427|FBtr0305671 24788006|24788006 24788287|24788287 2R - 24788111 24788284 3'utr Reg-5 FlyBase G26492.1 CGCGGTCAGAGGATCCGCAGGCCTAGACCTAAGTCCTTGTGTGAATGTGATAGAGCAGATGAGGAGATCCTGCATCATAGAGTGCGAGAGTGAACGTGTGAGTCTTCTAGTTGTAGCCGTTTGAGGAGTTTTCTTGAATGCACTTGAGCTTTAATGGAATTTCGTATCGTATTC 597 24788140 0.82031255 30 572 4538 0.957983193 2.136086097 0.256302521 0.162479062 0.299719888 597 26 4 684 2R:24788111-24788284 7 Reg-5 FBtr0305671|FBtr0072427 24788006|24788006 24788287|24788287 AGCTTTA 7mer-A1 dme-miR-79-3p 2R - 24788113 24788271 3'utr Reg-5 FlyBase G20035.1 TCCGCAGGCCTAGACCTAAGTCCTTGTGTGAATGTGATAGAGCAGATGAGGAGATCCTGCATCATAGAGTGCGAGAGTGAACGTGTGAGTCTTCTAGTTGTAGCCGTTTGAGGAGTTTTCTTGAATGCACTTGAGCTTTAATGGAATTTCGTATCGTAT 366 24788140 0.849085515 30 360 2638 0.983576642 2.731588765 0.28649635 0.366120219 0.576642336 366 9 0 539 2R:24788113-24788271 7 353 333 FBgn0015801 337.6666667 24.48 36.89333333 1.045409674 14.41993464 9.568124322 2 2 2 0.5 dme-miR-263a-5p 6mer3-8 GTGCCA 2R 24886886 24886891 + 2R_24886886_24886891_+ 0.698844953 0.941305954 0.820075453 0.171445817 NKAIN FBtr0301847|FBtr0305056|FBtr0301849|FBtr0301848 24885969|24885969|24885969|24885969 24886945|24888615|24886945|24886945 2R + 24886857 24886919 5'utr NKAIN FlyBase G19157.1 ATTTAGCCATGCGAATTGTGCGTAGACTGGTGCCAATTCTCGAAGAGATTGAACGCGTTTCCA 111 24886879 0.718578461 11 105 670 0.939849624 1.795880017 0.15037594 0.144144144 0.285714286 111 7 1 125 2R:24886857-24886919 6 NKAIN FBtr0301848|FBtr0301849|FBtr0305056|FBtr0301847 24885969|24885969|24885969|24885969 24886945|24886945|24888615|24886945 GTGCCA 6mer3-8 dme-miR-263a-5p 2R + 24886744 24886912 5'utr NKAIN FlyBase G14570.1 CGTATAGAAATGTTAAGCCTAGTATTAAGCTTGAGGCCACAAAACGCAAGAGCAGAGCAGATCTAAATCCATTTAGCGTAGACACTATTTACTGTTTTAGATAGATCCCTCATATTTAGCCATGCGAATTGTGCGTAGACTGGTGCCAATTCTCGAAGAGATTGAACGC 129 24886880 0.979568581 24 119 828 0.927884615 1.984527313 0.158653846 0.395348837 0.625 129 14 1 193 2R:24886744-24886912 6 100 334 FBgn0085442 1933.686667 63.05666667 96.30333333 0.051714687 1.585875139 1.038385656 7 6 6.5 0.5 dme-miR-34-5p 6mer2-7 ACTGCC 2R 3900374 3900379 - 2R_3900374_3900379_- 0.694203574 0.928739863 0.811471719 0.165842208 uex FBtr0302226 3900283 3900785 2R - 3900355 3900412 3'utr uex FlyBase G19352.1 TTAGAAGGGCTAAACTCGATGTTAAAAAAATAAACTGCCTGTTTAACTGTATTCCTTA 21 3900371 0.928757019 9 17 173 0.869565217 1 0.043478261 0.095238095 0.173913043 21 2 1 20 2R:3900355-3900412 6 uex FBtr0302226 3900283 3900785 ACTGCC 6mer2-7 dme-miR-34-5p 2R - 3900327 3900436 3'utr uex FlyBase G14709.1 AGTTAATCTTCCTTAGAAATGGTTTTAGAAGGGCTAAACTCGATGTTAAAAAAATAAACTGCCTGTTTAACTGTATTCCTTATTAAACTTAAATGTGTTTGTGAACACAG 20 3900372 0.850428671 11 17 157 1 1.505149978 0.09375 0.5 0.6875 20 0 0 32 2R:3900327-3900436 6 11.5 335 FBgn0262124 3391.336667 116.7833333 178.7433333 0.003390993 0.098472956 0.064338064 -8 -7 -7.5 0.5 dme-bantam-3p 6mer3-8 TGATCT 2R 4817380 4817385 - 2R_4817380_4817385_- 0.854004188 0.691488462 0.772746325 0.114915954 CG17528 FBtr0111277 4815424 4817448 2R - 4817356 4817429 3'utr CG17528 FlyBase G19500.1 AAAAAAAGCAACTTTCACTCTTAAACGACGAACTTTTGTATTTCTGATCTAAAAATGCTTTTATATTAGCCCTA 38 4817386 0.863462485 11 37 295 1 1.591064607 0.128205128 0.054054054 0.102564103 37 0 0 39 2R:4817356-4817429 6 CG17528 FBtr0111277|FBtr0111274 4815424|4817259 4817448|4817448 TGATCT 6mer3-8 dme-bantam-3p 2R - 4817349 4817428 3'utr CG17528 FlyBase G14816.1 AAAAAAGCAACTTTCACTCTTAAACGACGAACTTTTGTATTTCTGATCTAAAAATGCTTTTATATTAGCCCTAATTTATT 26 4817386 0.984012037 10 24 207 0.976190476 1.311753861 0.119047619 0.423076923 0.642857143 26 0 1 41 2R:4817349-4817428 6 18 336 FBgn0261387 730.0966667 30.65666667 47.04333333 0.02465427 0.587147983 0.382625948 1 1 1 0.5 dme-miR-92b-3p 7mer-A1 TGCAATA 2R 5117426 5117432 - 2R_5117426_5117432_- 0.730261386 0.755791299 0.743026342 0.018052365 gus FBtr0309850|FBtr0309846|FBtr0309848|FBtr0309851 5117211|5117211|5116988|5117211 5117662|5117662|5117662|5117662 2R - 5117356 5117628 NoAnnotation G19516.1 TTTTTGCTGCATGTGATGAAAGCAGCAAATACTAATTGTGTTAGATTATAATAGTATTAGATCAATGTTTGTCTGTCCTCCAACAGGAAAATCATAGGTATACAATTCGTAATAATACTTTACTTAAGCTATAAAGATTGATTGTATATTAAGAAGCATTCAAATAATAGTATGTACACGGAATGACATCTCATCTTGCAATAAATTGGAGAATCGAGTTTCTTCATGTAACATTATTTAAAAACTATACTCACTTCGTGTTATATAAAAAGC 279 5117445 0.969244809 47 268 2013 0.964285714 1.846337112 0.090659341 0.222222222 0.403846154 279 9 4 351 2R:5117356-5117628 7 gus FBtr0309846|FBtr0309852|FBtr0309849|FBtr0309850|FBtr0309847|FBtr0309848|FBtr0309851 5117211|5117330|5117330|5117211|5117392|5116988|5117211 5117662|5117662|5117662|5117662|5117662|5117662|5117662 TGCAATA 7mer-A1 dme-miR-92b-3p 2R - 5117401 5117629 3'utr gus FlyBase G14831.1 ATTTTTGCTGCATGTGATGAAAGCAGCAAATACTAATTGTGTTAGATTATAATAGTATTAGATCAATGTTTGTCTGTCCTCCAACAGGAAAATCATAGGTATACAATTCGTAATAATACTTTACTTAAGCTATAAAGATTGATTGTATATTAAGAAGCATTCAAATAATAGTATGTACACGGAATGACATCTCATCTTGCAATAAATTGGAGAATCGAGTTTCTTCATG 177 5117445 0.982343248 37 170 1275 0.960784314 2.389166084 0.094117647 0.299435028 0.51372549 177 10 0 245 2R:5117401-5117629 7 91 337 FBgn0026238 600.2866667 48.80333333 74.76 0.151594238 1.864626733 1.217228464 13 13 13 0.5 dme-miR-999-3p 6mer3-8 AGTTAA 2R 5295929 5295934 + 2R_5295929_5295934_+ 0.640248924 0.88564851 0.762948717 0.173523721 d4 FBtr0086082|FBtr0335258|FBtr0086083|FBtr0111115 5295893|5295893|5295893|5295893 5295965|5295965|5295965|5295965 2R + 5295925 5295954 3'utr d4 FlyBase G12979.1 TATAAGTTAATCTTCTCATAAATATAAAAA 14 5295932 0.829688727 6 11 112 0.785714286 0.740362689 0 0 0 14 2 1 11 2R:5295925-5295954 6 d4 FBtr0086083|FBtr0111115|FBtr0086082|FBtr0335258 5295893|5295893|5295893|5295893 5295965|5295965|5295965|5295965 AGTTAA 6mer3-8 dme-miR-999-3p 2R + 5295917 5295956 3'utr d4 FlyBase G9903.1 TCACCAATTATAAGTTAATCTTCTCATAAATATAAAAAAC 14 5295932 0.706228405 5 13 122 0.882352941 1.176091259 0.058823529 0.214285714 0.352941176 14 2 0 15 2R:5295917-5295956 6 14 338 FBgn0033015 779.7666667 52.91333333 81.00666667 0.017954089 0.264583596 0.172825282 -3 -3 -3 0.5 dme-miR-34-5p 8mer-A1 CACTGCCA 2R 5447156 5447163 + 2R_5447156_5447163_+ 0.570755563 0.678082886 0.624419224 0.075891862 laccase2 FBtr0299918|FBtr0301063 5446975|5446975 5447974|5447298 2R + 5447113 5447171 3'utr laccase2 FlyBase G13033.1 ATTTAAAACGCACAATGCACTGTTTTTATTTAATAATTTTAAACACTGCCAATGTCCAA 17 5447150 0.981495538 9 16 121 1 1.230448921 0.058823529 0 0 17 0 0 17 2R:5447113-5447171 8 laccase2 FBtr0301063|FBtr0299918 5446975|5446975 5447298|5447974 CACTGCCA 8mer-A1 dme-miR-34-5p 2R + 5447114 5447168 3'utr laccase2 FlyBase G9945.1 TTTAAAACGCACAATGCACTGTTTTTATTTAATAATTTTAAACACTGCCAATGTC 8 5447142 0.983091335 8 8 63 1 1.176091259 0.2 0.5 0.733333333 8 0 0 15 2R:5447114-5447168 8 9 339 FBgn0259247 554.2366667 21.22 32.31 0.01623855 0.424128181 0.278551532 6 14 10 0.5 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 2R 5609707 5609714 + 2R_5609707_5609714_+ 0.53971116 0.598081262 0.568896211 0.041273894 CG17508 FBtr0307172 5609514 5609994 2R + 5609632 5609738 3'utr CG17508 FlyBase G13043.1 CTGCATATATCAGGAACTCATTCTAAGGATTGGCTTTCAGTTCCCAGGAACCCTATTATATAGAAATTAGAATTGACCAAAGAATTTATTAAATTGCAAGAAAACCG 49 5609704 0.915205379 17 46 354 0.925925926 1.698970004 0.074074074 0.102040816 0.185185185 49 4 0 50 2R:5609632-5609738 8 CG17508 FBtr0307172 5609514 5609994 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 2R + 5609638 5609724 3'utr CG17508 FlyBase G9956.1 ATATCAGGAACTCATTCTAAGGATTGGCTTTCAGTTCCCAGGAACCCTATTATATAGAAATTAGAATTGACCAAAGAATTTATTAAA 30 5609704 0.877027844 14 30 207 1 1.653212514 0.111111111 0.333333333 0.555555556 30 0 0 45 2R:5609638-5609724 8 18 340 FBgn0039970 517.7666667 53.29333333 81.50333333 0.034764695 0.337753315 0.220849863 3 3 3 0.5 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 2R 5705043 5705048 + 2R_5705043_5705048_+ 0.711449902 0.538533653 0.624991778 0.122270218 vlc FBtr0307530|FBtr0300503|FBtr0086039|FBtr0086040|FBtr0307531|FBtr0086041|FBtr0307532|FBtr0300502 5704918|5704918|5704918|5704918|5704918|5704918|5704918|5704918 5705439|5705439|5705439|5705439|5705439|5705439|5705439|5705439 2R + 5705019 5705063 3'utr vlc FlyBase G13103.1 ATTTCTAGTTGAATTAATCATTTACTAGTCCCAACTAAAATTATT 18 5705040 0.702970362 6 18 137 1 1.414973348 0 0.277777778 0.5 18 0 0 26 2R:5705019-5705063 6 vlc FBtr0307532|FBtr0300502|FBtr0307531|FBtr0086041|FBtr0086039|FBtr0086040|FBtr0307530|FBtr0300503 5704918|5704918|5704918|5704918|5704918|5704918|5704918|5704918 5705439|5705439|5705439|5705439|5705439|5705439|5705439|5705439 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 2R + 5705033 5705057 3'utr vlc FlyBase G10015.1 TAATCATTTACTAGTCCCAACTAAA 10 5705040 0.639672593 4 9 53 1 1.113943352 0.076923077 0.3 0.461538462 10 0 0 13 2R:5705033-5705057 6 14 341 FBgn0259978 569 27.35666667 41.84333333 0.024604569 0.511758255 0.334581375 3 3 3 0.5 dme-miR-1008-3p 6mer2-7 GCTGTG 2R 5705205 5705210 + 2R_5705205_5705210_+ 0.59305678 0.597402991 0.595229885 0.003073227 vlc FBtr0307530|FBtr0300503|FBtr0086039|FBtr0086040|FBtr0307531|FBtr0086041|FBtr0307532|FBtr0300502 5704918|5704918|5704918|5704918|5704918|5704918|5704918|5704918 5705439|5705439|5705439|5705439|5705439|5705439|5705439|5705439 2R + 5705071 5705236 3'utr vlc FlyBase G13104.1 AGCTCCTCACTGAAATCTGTCACAAGGCGTCAAATATCTAGGAGATAACGAAGTATTGTCACCAATTGCGACTTACCTAAAGTTGTTCATAAATATTGCCTTATCCGCGAAAGATTTCGCTAATTAATCAATTTGCTGTGCACATTATGTAATTGAAAATTAAAAT 144 5705203 0.806513121 24 142 1075 0.983783784 1.782950133 0.108108108 0.215277778 0.389189189 144 1 2 182 2R:5705071-5705236 6 vlc FBtr0307532|FBtr0300502|FBtr0307531|FBtr0086041|FBtr0086039|FBtr0086040|FBtr0307530|FBtr0300503 5704918|5704918|5704918|5704918|5704918|5704918|5704918|5704918 5705439|5705439|5705439|5705439|5705439|5705439|5705439|5705439 GCTGTG 6mer2-7 dme-miR-1008-3p 2R + 5705157 5705254 3'utr vlc FlyBase G10017.1 TCATAAATATTGCCTTATCCGCGAAAGATTTCGCTAATTAATCAATTTGCTGTGCACATTATGTAATTGAAAATTAAAATTACTTGATTACATATAAA 62 5705203 0.987724126 10 56 500 0.896226415 1.500602351 0.066037736 0.435483871 0.669811321 62 9 2 95 2R:5705157-5705254 6 79 342 FBgn0259978 569 27.35666667 41.84333333 0.13884007 2.887778725 1.887994902 2 2 2 0.5 dme-miR-2b-2-5p 7mer-A1 TGAAGAA 2R 5706506 5706512 - 2R_5706506_5706512_- 0.743508739 0.629564877 0.686536808 0.080570434 ap FBtr0086058|FBtr0086059 5706200|5706200 5707932|5707932 2R - 5706490 5706825 3'utr ap FlyBase G19685.2 AGTCTAGTTTACACGTATGTTCTACGAGGAACGGACCGATTGTTCCTATGAGAGCTATAGGTTTTACCATATGTATATGCATGCATTACTTCAGCTCCATCTCTTTTTGATTCATAAACGTATAATGGTTTGAGAGTAAACATTTTGTGGCGTATATAGTTCAAGTTTACATATTTAGAGTACGGTGCCCAAGACGCGCTTTAAAAATATTGAAAACGGGTTGTTAATGAAGTCCCATATGTATAATTGTCTAGGTACATGGATATTGTTAATATATTATTATTTTTATTTAAAGAGCTCTCAACAATATGTATGAAGAAATCTGCGTATATCAAC 1223 5706512 0.882054457 86 1159 8167 0.95379538 1.56880324 0.238283828 0.188216039 0.345214521 1222 32 38 1445 2R:5706490-5706825 7 ap FBtr0086058|FBtr0086059 5706200|5706200 5707932|5707932 TGAAGAA 7mer-A1 dme-miR-2b-2-5p 2R - 5706490 5706820 3'utr ap FlyBase G14955.2 AGTTTACACGTATGTTCTACGAGGAACGGACCGATTGTTCCTATGAGAGCTATAGGTTTTACCATATGTATATGCATGCATTACTTCAGCTCCATCTCTTTTTGATTCATAAACGTATAATGGTTTGAGAGTAAACATTTTGTGGCGTATATAGTTCAAGTTTACATATTTAGAGTACGGTGCCCAAGACGCGCTTTAAAAATATTGAAAACGGGTTGTTAATGAAGTCCCATATGTATAATTGTCTAGGTACATGGATATTGTTAATATATTATTATTTTTATTTAAAGAGCTCTCAACAATATGTATGAAGAAATCTGCGTATATCAAC 816 5706512 0.881105855 68 768 5229 0.941415785 1.586212104 0.260374288 0.378676471 0.587469487 816 43 29 1157 2R:5706490-5706820 7 517.5 343 FBgn0000099 2 0.113333333 0.183333333 258.75 4566.176471 2822.727273 0 0 0 0.5 dme-miR-14-3p 7mer-m8 AAGACTG 2R 5772217 5772223 + 2R_5772217_5772223_+ 0.670594717 0.670946446 0.670770582 0.000248689 Gp210 FBtr0086044|FBtr0335270 5772199|5772199 5772492|5774324 2R + 5772194 5772238 stop_codon Gp210 FlyBase G13157.1 TAGTTAGTTGGATACGTAAATTAAAGACTGTCAGCAAACTGACTC 89 5772224 0.694120598 5 85 438 0.962264151 2.008600172 0.169811321 0.168539326 0.301886792 89 4 0 102 2R:5772194-5772238 7 Gp210 FBtr0335270|FBtr0086044 5772199|5772199 5774324|5772492 AAGACTG 7mer-m8 dme-miR-14-3p 2R + 5772134 5772242 stop_codon Gp210 FlyBase G10060.1 GTATATTTATGGACACCCTCGTTTGAACTCTTCAAACAGATCAGAAAACTCGACTAGCTTTAGTTAGTTGGATACGTAAATTAAAGACTGTCAGCAAACTGACTCGGGT 84 5772215 0.967086338 14 80 436 0.959016393 1.767155866 0.262295082 0.369047619 0.56557377 84 4 1 117 2R:5772134-5772242 7 80.5 344 FBgn0266580 2948.146667 58.77 90.26 0.02730529 1.369746469 0.891867937 -7 2 -2.5 0.5 dme-miR-980-3p 6mer2-7 GCAGCT 2R 5772292 5772297 + 2R_5772292_5772297_+ 0.692719784 0.860478678 0.776599231 0.118623456 Gp210 FBtr0086044|FBtr0335270 5772199|5772199 5772492|5774324 2R + 5772256 5772339 3'utr Gp210 FlyBase G13158.1 ATATAAGATAAACTCAGGCATTTGTAATACTTATATGCAGCTTCTGTCCTTTAAAGTAAATTCTTCTCATCCTGACGCCAGAAA 67 5772297 0.914720795 14 65 580 0.974683544 1.58546073 0.075949367 0.164179104 0.291139241 67 1 1 77 2R:5772256-5772339 6 Gp210 FBtr0335270|FBtr0086044 5772199|5772199 5774324|5772492 GCAGCT 6mer2-7 dme-miR-980-3p 2R + 5772260 5772318 3'utr Gp210 FlyBase G10061.1 AAGATAAACTCAGGCATTTGTAATACTTATATGCAGCTTCTGTCCTTTAAAGTAAATTC 45 5772297 0.896308237 9 43 390 0.971014493 1.826074803 0.130434783 0.355555556 0.579710145 45 2 0 67 2R:5772260-5772318 6 49.5 345 FBgn0266580 2948.146667 58.77 90.26 0.016790209 0.842266462 0.548415688 -5 -5 -5 0.5 dme-miR-965-3p 7mer-m8 TACGCTT 2R 6011934 6011940 + 2R_6011934_6011940_+ 0.617628207 0.605705024 0.611666615 0.008430976 Src42A FBtr0335275|FBtr0335276 6011610|6011610 6012500|6012795 2R + 6011893 6011961 3'utr Src42A FlyBase G13170.1 TTGTTTATTATGACAAACATATTGGCACTTGGTCGGATTTATACGCTTTGACATCCTTGTCGTATATTT 22 6011933 0.98826728 12 21 194 0.96 1.380211242 0.2 0.090909091 0.2 22 1 0 24 2R:6011893-6011961 7 Src42A FBtr0335275|FBtr0335276 6011610|6011610 6012500|6012795 TACGCTT 7mer-m8 dme-miR-965-3p 2R + 6011902 6011956 3'utr Src42A FlyBase G10070.1 ATGACAAACATATTGGCACTTGGTCGGATTTATACGCTTTGACATCCTTGTCGTA 20 6011941 0.679819241 6 18 170 0.944444444 1.531478917 0.083333333 0.5 0.722222222 20 2 0 34 2R:6011902-6011956 7 15.5 346 FBgn0264959 2196.93 83.74333333 128.84 0.0070553 0.18508936 0.120304253 1 -7 -3 0.5 dme-miR-92b-3p 8mer-m1 GTGCAATT 2R 6091023 6091030 - 2R_6091023_6091030_- 0.588182923 0.486762084 0.537472503 0.071715335 EcR FBtr0302439|FBtr0086008|FBtr0086010|FBtr0086012 6087871|6090417|6090417|6090417 6092587|6092587|6092587|6092587 2R - 6091010 6091045 3'utr EcR FlyBase G20035.1 CTTTCTACTTGAATTGTGCAATTTTTTACTTTTACT 14 6091032 0.732402923 6 14 147 1 1.230448921 0 0.214285714 0.352941176 14 0 0 17 2R:6091010-6091045 8 EcR FBtr0086012|FBtr0086008|FBtr0086010|FBtr0302439 6090417|6090417|6090417|6087871 6092587|6092587|6092587|6092587 GTGCAATT 8mer-m1 dme-miR-92b-3p 2R - 6090996 6091041 3'utr EcR FlyBase G15202.2 CTACTTGAATTGTGCAATTTTTTACTTTTACTACTAATCCTAATTT 11 6091032 0.928711765 4 8 120 0.875 0.669006781 0.0625 0.363636364 0.5625 11 0 2 14 2R:6090996-6091041 8 10.5 347 FBgn0000546 917.5266667 23.27333333 35.89 0.011443809 0.451160126 0.292560602 2 2 2 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 6626425 6626431 - 2R_6626425_6626431_- 0.496795829 0.496786907 0.496791368 6.29E-06 Vha16-1 FBtr0086152|FBtr0086152|FBtr0086152|FBtr0086150|FBtr0086150|FBtr0086150|FBtr0086153|FBtr0086153|FBtr0086153|FBtr0086151|FBtr0086151|FBtr0086151 6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240 6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469 2R - 6626359 6626544 3'utr Vha16-1 FlyBase G20121.3 ACACACATACAAAATGTAACTAAGTCCTACGTTTATTTTTAATTATTGTTCAATTCTAAGAATAATATATTAAAAATTAATAATAATAAATTATATATATAATTATGATTTTTTGTGATAAGAACAGATGGTAATGCAAACAATTACGGTATTGATATACATAATATATACAGAATATATATATAT 408 6626433 0.77285983 31 378 3488 0.928131417 1.509010399 0.223819302 0.159313725 0.295687885 408 22 13 452 2R:6626359-6626544 7 Vha16-1 FBtr0086151|FBtr0086151|FBtr0086151|FBtr0086153|FBtr0086153|FBtr0086153|FBtr0086150|FBtr0086150|FBtr0086150|FBtr0086152|FBtr0086152|FBtr0086152 6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240|6625240 6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469|6627469 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 6626357 6626457 3'utr Vha16-1 FlyBase G15273.1 AAATTATATATATAATTATGATTTTTTGTGATAAGAACAGATGGTAATGCAAACAATTACGGTATTGATATACATAATATATACAGAATATATATATATAT 263 6626433 0.710250446 20 237 2224 0.92 1.423875743 0.245333333 0.30418251 0.512 263 18 12 345 2R:6626357-6626457 7 283 348 FBgn0262736 36576.97333 1582.373333 2438.476667 0.007737108 0.178845279 0.116056062 2 2 2 0.5 dme-miR-184-5p 7mer-m8 TGATAAG 2R 6670437 6670443 - 2R_6670437_6670443_- 0.656037335 0.491860311 0.573948823 0.11609067 Hsepi FBtr0086145|FBtr0302190 6670152|6670152 6671031|6671031 2R - 6670396 6670503 3'utr Hsepi FlyBase G20165.1 AGCGCTCCCACTCAATACTAACTGCCCAAATAACGATGCACGATAATAACGACTTATATATGATAAGCCTGTAATGTAATGTATTGTAGTGTATGCCACTCGAGAATA 17 6670458 0.971457255 10 16 99 0.947368421 1.255272505 0.263157895 0.117647059 0.210526316 17 1 0 18 2R:6670396-6670503 7 Hsepi FBtr0302190|FBtr0086145 6670152|6670152 6671031|6671031 TGATAAG 7mer-m8 dme-miR-184-5p 2R - 6670415 6670470 3'utr Hsepi FlyBase G15304.1 CGATGCACGATAATAACGACTTATATATGATAAGCCTGTAATGTAATGTATTGTAG 7 6670457 0.971527834 5 7 40 1 0.954242509 0.222222222 0.142857143 0.333333333 7 0 0 9 2R:6670415-6670470 7 6 349 FBgn0033087 180.49 7.23 11.15666667 0.033242839 0.829875519 0.53779504 15 14 14.5 0.5 dme-miR-1012-3p 7mer-A1 TGACTAA 2R 6698613 6698619 + 2R_6698613_6698619_+ 0.792202924 0.587756724 0.689979824 0.144565294 Rab2 FBtr0086124|FBtr0336658 6698543|6698543 6699469|6698844 2R + 6698553 6698641 3'utr Rab2 FlyBase G13358.1 CGCAGATGCCCGATTGCAATTCTGGGATAGGCGCAGCCGCTTCTGTAAAAGCTACTTTAGTGACTAACTAATAGAAGGTAGTTGAAGGA 22 6698609 0.966296488 10 21 142 0.961538462 1.397940009 0.307692308 0.136363636 0.269230769 22 1 0 25 2R:6698553-6698641 7 Rab2 FBtr0086124|FBtr0336658 6698543|6698543 6699469|6698844 TGACTAA 7mer-A1 dme-miR-1012-3p 2R + 6698559 6698638 3'utr Rab2 FlyBase G10197.1 TGCCCGATTGCAATTCTGGGATAGGCGCAGCCGCTTCTGTAAAAGCTACTTTAGTGACTAACTAATAGAAGGTAGTTGAA 18 6698609 0.979494153 5 15 103 0.896551724 1.414973348 0.068965517 0.388888889 0.620689655 18 3 0 26 2R:6698559-6698638 7 11.5 350 FBgn0014009 1265.866667 136.76 209.3033333 0.009084685 0.084088915 0.05494418 4 4 4 0.5 dme-miR-7-5p 6mer3-8 GTCTTC 2R 6700313 6700318 - 2R_6700313_6700318_- 0.525920671 0.587115746 0.556518208 0.043271399 CG45092 FBtr0344559|FBtr0344560|FBtr0344561 6700219|6700219|6699693 6705333|6705333|6705333 2R - 6700308 6700336 3'utr CG45092 FlyBase G20186.1 CAAACGGGTCCCTCAATTGTCTTCTTTAC 7 6700320 0.758022796 2 7 63 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 2R:6700308-6700336 6 CG45092 FBtr0344561|FBtr0344560|FBtr0344559 6699693|6700219|6700219 6705333|6705333|6705333 GTCTTC 6mer3-8 dme-miR-7-5p 2R - 6700305 6700338 3'utr CG45092 FlyBase G15320.1 TGCAAACGGGTCCCTCAATTGTCTTCTTTACAAA 6 6700320 0.874754292 2 6 52 1 0.954242509 0.444444444 0.5 0.666666667 6 0 0 9 2R:6700305-6700338 6 6.5 351 FBgn0266525 326.5166667 7.77 11.99666667 0.0199071 0.836550837 0.541817171 2 2 2 0.5 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 6762343 6762350 - 2R_6762343_6762350_- 0.498497309 0.494577642 0.496537475 0.002771646 Epac FBtr0329850|FBtr0112636|FBtr0329851|FBtr0329849 6761911|6761911|6761911|6759713 6762646|6762646|6762646|6762646 2R - 6762307 6762422 3'utr Epac FlyBase G20211.1 AGGAACTATCTCAATCTTCTAATGAACTGAAACCCAAACGCATTTTAATGCAAACGAGAAACTTTTTGCTTTAGTACAAAACGATGGAAAAGATGGAAAACAATTTGAAATTCGGC 43 6762352 0.985434524 12 41 334 0.958333333 1.662757832 0.458333333 0.093023256 0.1875 43 2 0 46 2R:6762307-6762422 8 Epac FBtr0329850|FBtr0112636|FBtr0329851|FBtr0329849 6761911|6761911|6761911|6759713 6762646|6762646|6762646|6762646 AGTACAAA 8mer-A1 dme-miR-305-5p 2R - 6762325 6762422 3'utr Epac FlyBase G15338.1 AGGAACTATCTCAATCTTCTAATGAACTGAAACCCAAACGCATTTTAATGCAAACGAGAAACTTTTTGCTTTAGTACAAAACGATGGAAAAGATGGAA 39 6762352 0.739158666 9 33 270 0.898305085 1.72427587 0.372881356 0.358974359 0.576271186 39 6 0 53 2R:6762325-6762422 8 32.5 352 FBgn0085421 11.33333333 0.29 0.44 2.867647059 112.0689655 73.86363636 2 2 2 0.5 dme-miR-1007-3p 8mer-A1 TGAGCTTA 2R 6762546 6762553 - 2R_6762546_6762553_- 0.451485532 0.499152609 0.475319071 0.03370573 Epac FBtr0329850|FBtr0112636|FBtr0329851|FBtr0329849 6761911|6761911|6761911|6759713 6762646|6762646|6762646|6762646 2R - 6762523 6762576 3'utr Epac FlyBase G20213.1 AACCGCAATTAGCTGCACAGTTATGAGCTTAGCCGGGTTGTTGTTGCTTTCCGA 31 6762553 0.82651848 4 31 272 1 1.556302501 0.083333333 0.161290323 0.277777778 31 0 0 36 2R:6762523-6762576 8 Epac FBtr0329850|FBtr0112636|FBtr0329851|FBtr0329849 6761911|6761911|6761911|6759713 6762646|6762646|6762646|6762646 TGAGCTTA 8mer-A1 dme-miR-1007-3p 2R - 6762528 6762575 3'utr Epac FlyBase G15340.1 ACCGCAATTAGCTGCACAGTTATGAGCTTAGCCGGGTTGTTGTTGCTT 27 6762553 0.818818673 4 26 227 0.973684211 1.267171728 0.236842105 0.296296296 0.5 27 0 1 37 2R:6762528-6762575 8 28.5 353 FBgn0085421 11.33333333 0.29 0.44 2.514705882 98.27586207 64.77272727 0 0 0 0.5 dme-miR-305-5p 8mer-A1 AGTACAAA 2R 6814423 6814430 + 2R_6814423_6814430_+ 0.58789614 0.565481983 0.576689061 0.015849162 koi FBtr0335515|FBtr0335517|FBtr0335516 6814313|6814313|6814313 6814812|6814812|6814812 2R + 6814349 6814473 3'utr koi FlyBase G13408.1 ATTTAGTGATCTGGTTGGGTGCAACGCCCCTTGCACTTAGACAAATATGAGAAACTTTCTTTATGAACAATATGAGTACAAAATAAAGCATTTGATCCGTTTTTTGTCCGTCTGCTTGACCCGCA 49 6814421 0.781396755 20 45 341 0.945454545 1.716003344 0.109090909 0.12244898 0.218181818 49 3 0 52 2R:6814349-6814473 8 koi FBtr0335516|FBtr0335515|FBtr0335517 6814313|6814313|6814313 6814812|6814812|6814812 AGTACAAA 8mer-A1 dme-miR-305-5p 2R + 6814396 6814437 3'utr koi FlyBase G10230.1 TGAGAAACTTTCTTTATGAACAATATGAGTACAAAATAAAGC 14 6814421 0.698419374 5 12 70 0.769230769 1.301029996 0.192307692 0.571428571 0.769230769 14 6 0 20 2R:6814396-6814437 8 15 354 FBgn0265003 944.7366667 44.58333333 68.22333333 0.01587744 0.336448598 0.219866126 2 2 2 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 6972183 6972189 - 2R_6972183_6972189_- 0.746649782 0.558681995 0.652665888 0.132913306 Cyp6u1 FBtr0345011|FBtr0345011|FBtr0345011|FBtr0345802|FBtr0345802|FBtr0345802|FBtr0086185|FBtr0086185|FBtr0086185 6972110|6972110|6972110|6971994|6971994|6971994|6972110|6972110|6972110 6972304|6972304|6972304|6972304|6972304|6972304|6972304|6972304|6972304 2R - 6972168 6972228 3'utr Cyp6u1 FlyBase G20259.1 ATGCACCTTTTTCGTTGATTTTCCTAAGCTGTGGACTTGTGTGATAATGCTGACGATGACT 42 6972191 0.634960819 9 38 366 0.901960784 1.361727836 0.235294118 0.19047619 0.333333333 42 4 1 46 2R:6972168-6972228 7 Cyp6u1 FBtr0086185|FBtr0086185|FBtr0086185|FBtr0345011|FBtr0345011|FBtr0345011|FBtr0345802|FBtr0345802|FBtr0345802 6972110|6972110|6972110|6972110|6972110|6972110|6971994|6971994|6971994 6972304|6972304|6972304|6972304|6972304|6972304|6972304|6972304|6972304 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 6972162 6972215 3'utr Cyp6u1 FlyBase G15377.1 GTTGATTTTCCTAAGCTGTGGACTTGTGTGATAATGCTGACGATGACTTTTATA 12 6972192 0.983267933 7 12 91 1 1.146128036 0.571428571 0.166666667 0.285714286 12 0 0 14 2R:6972162-6972215 7 1.5 355 FBgn0033121 218 13.62333333 20.59666667 0.006880734 0.110105212 0.072827318 2 3 2.5 0.5 dme-miR-1008-3p 7mer-m8 AGCTGTG 2R 6972196 6972202 - 2R_6972196_6972202_- 0.619909891 0.419288687 0.519599289 0.141860611 Cyp6u1 FBtr0345011|FBtr0345802|FBtr0086185 6972110|6971994|6972110 6972304|6972304|6972304 2R - 6972168 6972228 3'utr Cyp6u1 FlyBase G20259.1 ATGCACCTTTTTCGTTGATTTTCCTAAGCTGTGGACTTGTGTGATAATGCTGACGATGACT 42 6972191 0.634960819 9 38 366 0.901960784 1.361727836 0.235294118 0.19047619 0.333333333 42 4 1 46 2R:6972168-6972228 7 Cyp6u1 FBtr0086185|FBtr0345011|FBtr0345802 6972110|6972110|6971994 6972304|6972304|6972304 AGCTGTG 7mer-m8 dme-miR-1008-3p 2R - 6972162 6972215 3'utr Cyp6u1 FlyBase G15377.1 GTTGATTTTCCTAAGCTGTGGACTTGTGTGATAATGCTGACGATGACTTTTATA 12 6972192 0.983267933 7 12 91 1 1.146128036 0.571428571 0.166666667 0.285714286 12 0 0 14 2R:6972162-6972215 7 5.5 356 FBgn0033121 218 13.62333333 20.59666667 0.025229358 0.403719109 0.267033501 -11 -10 -10.5 0.5 dme-miR-1002-5p 8mer-A1 CTACTTAA 2R 7382727 7382734 - 2R_7382727_7382734_- 0.530298374 0.612491206 0.57139479 0.058119086 cos FBtr0089015|FBtr0336916 7382174|7382521 7383196|7383196 2R - 7382689 7382781 3'utr cos FlyBase G20351.1 ATGAAAGTAACTATCCTCATGAGATTCAACCGTAAAGACTTGACCTGCTACTTAAGATACTCGCAAGACAAACCGTACACAAAACTCGCTCAA 32 7382762 0.971748242 13 31 181 0.972972973 1.255272505 0.081081081 0.09375 0.216216216 32 0 1 36 2R:7382689-7382781 8 cos FBtr0089015|FBtr0336916 7382174|7382521 7383196|7383196 CTACTTAA 8mer-A1 dme-miR-1002-5p 2R - 7382712 7382778 3'utr cos FlyBase G15444.1 AAAGTAACTATCCTCATGAGATTCAACCGTAAAGACTTGACCTGCTACTTAAGATACTCGCAAGACA 23 7382737 0.749251079 11 21 129 0.891891892 1.51851394 0.216216216 0.52173913 0.702702703 23 4 0 33 2R:7382712-7382778 8 15 357 FBgn0000352 545 14.08 21.54666667 0.027522936 1.065340909 0.696163366 28 3 15.5 0.5 dme-miR-1012-3p 8mer-A1 TTGACTAA 2R 7398357 7398364 - 2R_7398357_7398364_- 0.62356366 0.618114525 0.620839092 0.003853166 Eaf FBtr0089009|FBtr0089006|FBtr0089008|FBtr0089007 7398224|7398224|7398224|7396848 7398395|7398395|7398395|7398395 2R - 7398347 7398493 stop_codon Eaf FlyBase G20380.1 AGTCCGGCATTTATGCGTCCAATGGTGGCTTTCCAAACGATTTCCTACAAAACGATCTGCAGTTGTCGTCAAATTCGTCCGACGATGACGACGACTAGCTGTTTAAAGTTTGATCTTATTTGCCTTCTTTTGACTAAACCAACGACA 102 7398375 0.855002773 23 100 868 0.98245614 1.748188027 0.166666667 0.107843137 0.201754386 102 1 1 112 2R:7398347-7398493 8 Eaf FBtr0089008|FBtr0089007|FBtr0089009|FBtr0089006 7398224|7396848|7398224|7398224 7398395|7398395|7398395|7398395 TTGACTAA 8mer-A1 dme-miR-1012-3p 2R - 7398306 7398421 stop_codon Eaf FlyBase G15459.1 ATTCGTCCGACGATGACGACGACTAGCTGTTTAAAGTTTGATCTTATTTGCCTTCTTTTGACTAAACCAACGACAACAAGAGCAACAACAATTATTGATATTTTGTCTATATGCGT 66 7398383 0.97971807 13 64 588 0.978723404 1.963787827 0.234042553 0.333333333 0.531914894 66 2 0 92 2R:7398306-7398421 8 19 358 FBgn0033166 365.6833333 12.62666667 19.28666667 0.051957522 1.504751848 0.985136536 11 19 15 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2R 7481165 7481170 - 2R_7481165_7481170_- 0.869569598 0.575867873 0.722718736 0.207678464 wech FBtr0300083|FBtr0300083|FBtr0300083|FBtr0300082|FBtr0300082|FBtr0300082 7480093|7480093|7480093|7478851|7478851|7478851 7483393|7483393|7483393|7483393|7483393|7483393 2R - 7481155 7481209 5'utr wech FlyBase G20462.1 TTTTATCCAATCGTACACCTTGAAGCGCCGTTCATTTCTTGTGATCCAGATCGAA 22 7481172 0.75689083 7 17 169 0.791666667 1.278753601 0.041666667 0.090909091 0.166666667 22 5 0 19 2R:7481155-7481209 6 wech FBtr0300082|FBtr0300082|FBtr0300082|FBtr0300083|FBtr0300083|FBtr0300083 7478851|7478851|7478851|7480093|7480093|7480093 7483393|7483393|7483393|7483393|7483393|7483393 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 7481149 7481205 5'utr wech FlyBase G15520.1 ATCCAATCGTACACCTTGAAGCGCCGTTCATTTCTTGTGATCCAGATCGAATCATTC 9 7481173 0.991900533 5 8 81 0.916666667 0.740362689 0.416666667 0.333333333 0.5 9 0 1 11 2R:7481149-7481205 6 7.5 359 FBgn0259745 2441.89 39.74 61.13333333 0.003071391 0.188726724 0.122682661 2 3 2.5 0.5 dme-miR-277-3p 7mer-A1 GCATTTA 2R 7481999 7482005 - 2R_7481999_7482005_- 0.489749602 0.409447534 0.449598568 0.056782159 wech FBtr0300084|FBtr0300083|FBtr0300080|FBtr0300082 7481874|7480093|7481874|7478851 7483393|7483393|7483393|7483393 2R - 7481959 7482030 3'utr wech FlyBase G20467.1 AATTTTTGACTCAATGTGTTCATTAGCATTTAGTAGACTTAGCGGGCGTGGCATAGTGAAAACGTATGGAAA 318 7482016 0.988577787 19 264 3017 0.84 2.021189299 0.234666667 0.163522013 0.290666667 318 58 2 315 2R:7481959-7482030 7 wech FBtr0300082|FBtr0300084|FBtr0300083|FBtr0300080 7478851|7481874|7480093|7481874 7483393|7483393|7483393|7483393 GCATTTA 7mer-A1 dme-miR-277-3p 2R - 7481970 7482030 3'utr wech FlyBase G15526.1 AATTTTTGACTCAATGTGTTCATTAGCATTTAGTAGACTTAGCGGGCGTGGCATAGTGAAA 229 7482016 0.751177039 15 180 2176 0.775216138 2.42975228 0.293948127 0.366812227 0.582132565 229 78 0 269 2R:7481970-7482030 7 266.5 360 FBgn0259745 2441.89 39.74 61.13333333 0.109136775 6.706089582 4.359323882 11 11 11 0.5 dme-miR-14-3p 8mer-A1 AAGACTGA 2R 7482500 7482507 - 2R_7482500_7482507_- 0.614396506 0.6402779 0.627337203 0.018300913 wech FBtr0300084|FBtr0300083|FBtr0300080|FBtr0300082 7481874|7480093|7481874|7478851 7483393|7483393|7483393|7483393 2R - 7482445 7482554 3'utr wech FlyBase G20470.1 AAGAAAATATTGATGGAACCCGCTGACTTTTCGTTGAACTTTATACAAAGACTGATTAACTAAACCGCAATTTCGGAGCCAACTAAAGAACCATATATGGTGAGGCCAAA 241 7482499 0.829855746 19 219 1605 0.902356902 1.826074803 0.215488215 0.174273859 0.32996633 241 26 3 268 2R:7482445-7482554 8 wech FBtr0300082|FBtr0300084|FBtr0300083|FBtr0300080 7478851|7481874|7480093|7481874 7483393|7483393|7483393|7483393 AAGACTGA 8mer-A1 dme-miR-14-3p 2R - 7482280 7482554 3'utr wech FlyBase G15529.1 AAGAAAATATTGATGGAACCCGCTGACTTTTCGTTGAACTTTATACAAAGACTGATTAACTAAACCGCAATTTCGGAGCCAACTAAAGAACCATATATGGTGAGGCCAAAATAAGTGAAAGAGCAACACACTCAAATTGCAATGACATTGATAACGTAAAGTAACTTAACATAGCTTAACATACATACTTTCGCGCATATAGAGCGATACAGATATCATATAGATCCGATCATCCAGTCACGAATCATCATGGGCATAGCTGAAACCGAGTTTAA 229 7482499 0.978696172 34 217 1466 0.946629213 2.226599905 0.306179775 0.366812227 0.592696629 229 18 1 337 2R:7482280-7482554 8 165.5 361 FBgn0259745 2441.89 39.74 61.13333333 0.067775371 4.164569703 2.707197383 -8 -8 -8 0.5 dme-miR-14-3p 7mer-A1 AGACTGA 2R 7482624 7482630 - 2R_7482624_7482630_- 0.606898126 0.626542401 0.616720264 0.013890618 wech FBtr0300084|FBtr0300083|FBtr0300080|FBtr0300082 7481874|7480093|7481874|7478851 7483393|7483393|7483393|7483393 2R - 7482588 7482672 3'utr wech FlyBase G20471.1 TTTGGGACATACATATGTATTTTAATGATTTCCTTATAATTGAGACTGAGCATTTGACAACACGAACTTTGCGTGTACGGAAGCA 374 7482632 0.814231969 12 366 2667 0.980477223 2.354108439 0.106290672 0.200534759 0.351409978 374 8 1 452 2R:7482588-7482672 7 wech FBtr0300082|FBtr0300084|FBtr0300083|FBtr0300080 7478851|7481874|7480093|7481874 7483393|7483393|7483393|7483393 AGACTGA 7mer-A1 dme-miR-14-3p 2R - 7482582 7482652 3'utr wech FlyBase G15530.1 TTTAATGATTTCCTTATAATTGAGACTGAGCATTTGACAACACGAACTTTGCGTGTACGGAAGCAAAGCGA 270 7482632 0.977139938 16 257 1794 0.956632653 2.273001272 0.091836735 0.344444444 0.548469388 270 16 1 375 2R:7482582-7482652 7 308 362 FBgn0259745 2441.89 39.74 61.13333333 0.126131808 7.750377453 5.038167939 2 2 2 0.5 dme-miR-34-5p 6mer3-8 CACTGC 2R 7507914 7507919 + 2R_7507914_7507919_+ 0.663689752 0.992688258 0.828189005 0.23263707 didum FBtr0089743|FBtr0089745|FBtr0089744 7507857|7507857|7505871 7508237|7508625|7508237 2R + 7507856 7507927 stop_codon didum FlyBase G13548.1 TAAACGTCGCGTGCCTGCGTCTTGCCGGTCGAGAACTTTGCCATTTTGGATGACATTACACTGCTTAGTTTT 13 7507912 0.932591288 7 12 92 0.933333333 1.146128036 0.133333333 0.153846154 0.266666667 13 1 0 14 2R:7507856-7507927 6 didum FBtr0089744|FBtr0089745|FBtr0089743 7505871|7507857|7507857 7508237|7508625|7508237 CACTGC 6mer3-8 dme-miR-34-5p 2R + 7507865 7507927 3'utr didum FlyBase G10322.1 CGTGCCTGCGTCTTGCCGGTCGAGAACTTTGCCATTTTGGATGACATTACACTGCTTAGTTTT 6 7507912 0.990134796 5 5 45 1 1.113943352 0.153846154 0.666666667 0.846153846 6 0 0 13 2R:7507865-7507927 6 5 363 FBgn0261397 963.6266667 18.58333333 28.54333333 0.005188731 0.269058296 0.175172253 2 2 2 0.5 dme-miR-283-5p 8mer-A1 TGATATTA 2R 7580650 7580657 + 2R_7580650_7580657_+ 0.482467914 0.49352059 0.487994252 0.007815439 Vps13 FBtr0088910|FBtr0310024 7580470|7580470 7580675|7580675 2R + 7580614 7580664 3'utr Vps13 FlyBase G13600.1 ATGTCGCACTTTTACGTATGTTAACAACCATGGTTTTGATATTAAAATTTT 10 7580648 0.98854002 5 10 95 1 1 0.1 0 0 10 0 0 10 2R:7580614-7580664 8 Vps13 FBtr0310024|FBtr0088910 7580470|7580470 7580675|7580675 TGATATTA 8mer-A1 dme-miR-283-5p 2R + 7580627 7580661 3'utr Vps13 FlyBase G10359.1 ACGTATGTTAACAACCATGGTTTTGATATTAAAAT 8 7580648 0.693611658 5 8 68 1 1.278753601 0 0.75 0.894736842 8 0 0 19 2R:7580627-7580661 8 8 364 FBgn0033194 1638.743333 18.93 29.02666667 0.00488179 0.422609614 0.275608636 2 2 2 0.5 dme-miR-252-5p 6mer3-8 GTACTT 2R 7718684 7718689 - 2R_7718684_7718689_- 0.525513954 0.729769135 0.627641545 0.144430166 CG18812 FBtr0330328|FBtr0306239|FBtr0330327|FBtr0088935|FBtr0088937|FBtr0088936 7718444|7718444|7718277|7718444|7718277|7716805 7719261|7719261|7719237|7719261|7719261|7719261 2R - 7718661 7718783 5'utr CG18812 FlyBase G20697.1 AACGTTAGCAATGCTGAAGAAAATAAAATTTGATTAGAGACCCTGCATGTACCGGATATACACAAGATTATTCTAAATATGAAATTGATAAATTGTACTTGATACTTGATTACTGAAGGGAGA 33 7718690 0.97787248 10 33 221 1 1.556302501 0.194444444 0.060606061 0.138888889 33 0 0 36 2R:7718661-7718783 6 CG18812 FBtr0306239|FBtr0330328|FBtr0088936|FBtr0088937|FBtr0088935|FBtr0330327 7718444|7718444|7716805|7718277|7718444|7718277 7719261|7719261|7719261|7719261|7719261|7719237 GTACTT 6mer3-8 dme-miR-252-5p 2R - 7718583 7718698 5'utr CG18812 FlyBase G15697.1 TGATAAATTGTACTTGATACTTGATTACTGAAGGGAGACAGACGTATATATGAATAAGTATACATATTGTTAGTTATCTTTGCAATTACAAATTGTATTATTAATGTATTAATACT 13 7718690 0.987002199 8 13 120 1 1.322219295 0.142857143 0.461538462 0.666666667 13 0 0 21 2R:7718583-7718698 6 12 365 FBgn0042135 915.0533333 42.71666667 65.20333333 0.01311399 0.280920796 0.184039671 1 1 1 0.5 dme-miR-308-3p 8mer-m1 CTGTGATT 2R 7788280 7788287 + 2R_7788280_7788287_+ 0.376500117 0.367046925 0.371773521 0.006684422 CanB2 FBtr0309866 7787760 7789053 2R + 7788233 7788308 3'utr CanB2 FlyBase G13648.1 CGAATGCACTTTCGCTCTATCATATTGATGTTATATTTCTAATTCTCCTGTGATTTTGCCAAAAACAAAACAAAAA 82 7788287 0.989321651 11 79 759 0.970588235 1.694605199 0.137254902 0.219512195 0.37254902 82 2 1 99 2R:7788233-7788308 8 CanB2 FBtr0309866 7787760 7789053 CTGTGATT 8mer-m1 dme-miR-308-3p 2R + 7788231 7788312 3'utr CanB2 FlyBase G10397.1 ATCGAATGCACTTTCGCTCTATCATATTGATGTTATATTTCTAATTCTCCTGTGATTTTGCCAAAAACAAAACAAAAAAAAA 72 7788287 0.989852015 11 70 690 0.97029703 1.991226076 0.148514851 0.333333333 0.524752475 72 3 0 98 2R:7788231-7788312 8 72.5 366 FBgn0015614 671.95 42.17666667 64.64333333 0.107894933 1.71895993 1.1215387 -7 -7 -7 0.5 dme-miR-8-3p 7mer-A1 AGTATTA 2R 7800931 7800937 - 2R_7800931_7800937_- 0.81394069 0.679084242 0.746512466 0.095357946 Nop17l FBtr0088901|FBtr0088902|FBtr0088900 7800783|7800783|7800783 7801442|7801442|7801442 2R - 7800903 7801011 3'utr Nop17l FlyBase G20759.1 TGGCTCCATGCTCAGCTCATATAACAATCATAACACGATAAACCTAAACAATATCAATAGTTAACAATTCCTCTAGTATTACACACAACAAAATCACCCAATGCATAAG 26 7800937 0.974049211 13 23 153 0.911764706 1.190331698 0.029411765 0.192307692 0.382352941 26 2 1 31 2R:7800903-7801011 7 Nop17l FBtr0088902|FBtr0088900|FBtr0088901 7800783|7800783|7800783 7801442|7801442|7801442 AGTATTA 7mer-A1 dme-miR-8-3p 2R - 7800898 7800955 3'utr Nop17l FlyBase G15747.1 ATAGTTAACAATTCCTCTAGTATTACACACAACAAAATCACCCAATGCATAAGTAGAG 9 7800938 0.757729228 4 7 45 0.714285714 0.698970004 0 0.444444444 0.642857143 9 3 1 10 2R:7800898-7800955 7 9.5 367 FBgn0033224 692.0466667 23.42333333 35.88666667 0.013727398 0.405578483 0.264722274 0 1 0.5 0.5 dme-miR-308-3p 7mer-m1 TGTGATT 2R 7942171 7942177 - 2R_7942171_7942177_- 0.485054965 0.505998149 0.495526557 0.014809008 CG14764 FBtr0088880|FBtr0339128 7942041|7942041 7942634|7942634 2R - 7942153 7942203 3'utr CG14764 FlyBase G20843.1 ATAAAAACATCAAATGGCATACATTTTGTGATTGTATTTTATAGTTACTCA 160 7942179 0.672975227 9 152 1942 0.949748744 1.674401813 0.125628141 0.1875 0.346733668 160 7 3 189 2R:7942153-7942203 7 CG14764 FBtr0339128|FBtr0088880 7942041|7942041 7942634|7942634 TGTGATT 7mer-m1 dme-miR-308-3p 2R - 7942121 7942201 3'utr CG14764 FlyBase G15816.1 AAAAACATCAAATGGCATACATTTTGTGATTGTATTTTATAGTTACTCACGCGTAGACAAACATATACAGTATATAAATAT 124 7942179 0.865553592 13 117 1413 0.946808511 1.551449998 0.14893617 0.362903226 0.579787234 124 6 4 178 2R:7942121-7942201 7 138 368 FBgn0033236 872.35 39.06666667 59.99333333 0.158193386 3.532423208 2.300255584 2 2 2 0.5 dme-miR-282-5p 6mer3-8 AGAGGC 2R 7969139 7969144 - 2R_7969139_7969144_- 0.79692227 0.880639761 0.838781016 0.059197212 CG8726 FBtr0088874|FBtr0088873|FBtr0301231 7968127|7968127|7968127 7969258|7969258|7969823 2R - 7969131 7969172 3'utr CG8726 FlyBase G20867.1 ACTAATCGAATTCCAAAAGCTACATTTTAGAGGCATATTAAG 7 7969162 0.815869123 4 6 42 0.909090909 1 0 0.571428571 0.727272727 7 1 0 10 2R:7969131-7969172 6 CG8726 FBtr0301231|FBtr0088874|FBtr0088873 7968127|7968127|7968127 7969823|7969258|7969258 AGAGGC 6mer3-8 dme-miR-282-5p 2R - 7969081 7969179 3'utr CG8726 FlyBase G15833.1 AACTTGAACTAATCGAATTCCAAAAGCTACATTTTAGAGGCATATTAAGAAACAGAATACTAGCAGATCGAAGACACCGCTGAGCATAGAATAGTCCCA 9 7969162 0.970068225 6 9 49 1 1.113943352 0 0.444444444 0.615384615 9 0 0 13 2R:7969081-7969179 6 3.5 369 FBgn0033244 852.3333333 30.71666667 47.01 0.004106375 0.113944655 0.074452244 18 18 18 0.5 dme-miR-13b-2-5p 8mer-m1 TTTGACGC 2R 8079035 8079042 - 2R_8079035_8079042_- 0.457212285 0.454859344 0.456035814 0.001663822 Vps28 FBtr0310370 8078867 8079317 2R - 8079028 8079081 3'utr Vps28 FlyBase G20923.1 CTAATAAAAGGTGCATCTTCAATCTTCATGGATCAGTATTTTGACGCATATAGG 13 8079041 0.939967458 6 11 106 0.882352941 0.875061263 0 0.307692308 0.470588235 13 1 1 15 2R:8079028-8079081 8 Vps28 FBtr0310370 8078867 8079317 TTTGACGC 8mer-m1 dme-miR-13b-2-5p 2R - 8079032 8079070 3'utr Vps28 FlyBase G15871.1 TGCATCTTCAATCTTCATGGATCAGTATTTTGACGCATA 10 8079049 0.956123103 6 9 71 0.866666667 0.636822098 0.133333333 0.4 0.6 10 0 2 13 2R:8079032-8079070 8 9 370 FBgn0021814 287.86 39.29666667 59.69 0.031265198 0.229027059 0.150779025 -1 7 3 0.5 dme-miR-305-5p 7mer-A1 GTACAAA 2R 8086793 8086799 + 2R_8086793_8086799_+ 0.4945181 0.47865002 0.48658406 0.011220441 sut1 FBtr0088777 8086579 8087151 2R + 8086770 8086806 3'utr sut1 FlyBase G13808.2 CCGCCTAGCCTGTAAGTTCTTTTGTACAAACCAATAA 9 8086791 0.68849166 2 8 69 1 1.113943352 0 0.222222222 0.461538462 9 0 0 13 2R:8086770-8086806 7 sut1 FBtr0088777 8086579 8087151 GTACAAA 7mer-A1 dme-miR-305-5p 2R + 8086772 8086805 3'utr sut1 FlyBase G10511.1 GCCTAGCCTGTAAGTTCTTTTGTACAAACCAATA 8 8086791 0.97754337 2 8 59 1 1.041392685 0 0.375 0.545454545 8 0 0 11 2R:8086772-8086805 7 8 371 FBgn0028563 340.6433333 17.19333333 26.42666667 0.023484975 0.465296627 0.302724521 2 2 2 0.5 dme-miR-980-3p 7mer-m8 GGCAGCT 2R 8101980 8101986 + 2R_8101980_8101986_+ 0.530364529 0.494628475 0.512496502 0.025269168 CG11210 FBtr0088781 8101903 8102306 2R + 8101947 8102058 3'utr CG11210 FlyBase G13825.1 TATCTACAAAAGCCACTAAGAACTTTTCAAGTTGGCAGCTTTGATTTGCATACGAAAGAATGACAGGAGGATAACAGCAAGGCAATTTGTGATACCTAAACCAGCCTCAATG 601 8101978 0.981650021 17 576 5224 0.959654179 1.64738297 0.103746398 0.141430948 0.25648415 601 14 14 666 2R:8101947-8102058 7 CG11210 FBtr0088781 8101903 8102306 GGCAGCT 7mer-m8 dme-miR-980-3p 2R + 8101952 8102056 3'utr CG11210 FlyBase G10524.1 ACAAAAGCCACTAAGAACTTTTCAAGTTGGCAGCTTTGATTTGCATACGAAAGAATGACAGGAGGATAACAGCAAGGCAATTTGTGATACCTAAACCAGCCTCAA 421 8101978 0.895021184 17 401 3635 0.958333333 1.562642679 0.106481481 0.363420428 0.586419753 421 11 16 621 2R:8101952-8102056 7 434.5 372 FBgn0033259 595.3333333 24.97666667 38.03333333 0.729843225 17.39623649 11.42418931 2 2 2 0.5 dme-miR-2a-2-5p 8mer-m1 TGATGAGG 2R 8137079 8137086 - 2R_8137079_8137086_- 0.380094546 0.489609687 0.434852116 0.077438941 Lpin FBtr0303583|FBtr0303573|FBtr0303584|FBtr0113055 8136984|8136984|8136984|8136984 8137486|8137486|8137486|8137486 2R - 8137019 8137157 3'utr Lpin FlyBase G20993.1 AGACGGCGCATAGGAGTTGTGATTTTGATTTCATTATTTTTCGTATGTGATCATTTAAATTAAGTTAATTGTGATGAGGTTTTTATTTGAAGTTTTTATGAAAACTGTGCTCTAAACCTATGTATACTTAACTGATAGT 283 8137090 0.822479914 30 253 2521 0.91954023 1.359021943 0.227011494 0.173144876 0.327586207 283 15 13 320 2R:8137019-8137157 8 Lpin FBtr0303573|FBtr0113055|FBtr0303583|FBtr0303584 8136984|8136984|8136984|8136984 8137486|8137486|8137486|8137486 TGATGAGG 8mer-m1 dme-miR-2a-2-5p 2R - 8136985 8137157 3'utr Lpin FlyBase G15918.1 AGACGGCGCATAGGAGTTGTGATTTTGATTTCATTATTTTTCGTATGTGATCATTTAAATTAAGTTAATTGTGATGAGGTTTTTATTTGAAGTTTTTATGAAAACTGTGCTCTAAACCTATGTATACTTAACTGATAGTGTTTCAATACCAATAAATGCTTCAAATTCAAACA 189 8137090 0.98958929 31 169 1771 0.876865672 1.416825353 0.23880597 0.285714286 0.496268657 189 25 8 235 2R:8136985-8137157 8 60 373 FBgn0263593 1170.44 33.67 51.33333333 0.051262773 1.782001782 1.168831169 4 4 4 0.5 dme-miR-277-3p 8mer-A1 TGCATTTA 2R 8225969 8225976 + 2R_8225969_8225976_+ 0.602610592 0.509244826 0.555927709 0.06601959 LRP1 FBtr0344893|FBtr0344894 8225414|8225414 8226438|8226438 2R + 8225850 8225998 3'utr LRP1 FlyBase G13939.1 ATTGCCCAAAAGCAGCCTAGTTAACATTTAAACGGAGGAATCATTCGAGCACTCACTAACAATTTGCCAATTAGTGAATGCGGGCGAAATCGAAATCGCCTCTTGAGATTGACCAAATATGCATTTAAATTAATTAAGTATTCACAAAG 70 8225953 0.774345923 19 69 441 0.987654321 1.903089987 0.086419753 0.157142857 0.271604938 70 1 0 80 2R:8225850-8225998 8 LRP1 FBtr0344893|FBtr0344894 8225414|8225414 8226438|8226438 TGCATTTA 8mer-A1 dme-miR-277-3p 2R + 8225850 8225990 3'utr LRP1 FlyBase G10604.1 ATTGCCCAAAAGCAGCCTAGTTAACATTTAAACGGAGGAATCATTCGAGCACTCACTAACAATTTGCCAATTAGTGAATGCGGGCGAAATCGAAATCGCCTCTTGAGATTGACCAAATATGCATTTAAATTAATTAAGTAT 47 8225953 0.909663925 14 45 257 0.958333333 1.838849091 0 0.446808511 0.638888889 47 3 0 69 2R:8225850-8225990 8 20 374 FBgn0053087 1624.95 12.3 18.76333333 0.012308071 1.62601626 1.065908687 16 16 16 0.5 dme-miR-2a-2-5p 8mer-A1 TGATGAGA 2R 8682043 8682050 + 2R_8682043_8682050_+ 0.41864186 0.417510662 0.418076261 0.000799879 Acsl FBtr0088700|FBtr0100430|FBtr0088701|FBtr0088699|FBtr0100428|FBtr0333001|FBtr0100431|FBtr0100427|FBtr0100429|FBtr0100426 8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604 8682791|8682791|8682339|8682791|8682791|8682339|8682791|8683022|8682791|8682791 2R + 8681950 8682166 3'utr Acsl FlyBase G14034.1 AAGCTGAGTTTGGTTTGGAAATGCGCTGTGTATGTGCTAGGAATGCTGTTCAACCGATTGACAATGATAATGGTAATGATAACTGAATGCCGATGATGAGAAGGAATATTGTATACTGTACAGTTTTCGGTTTATAGTACATTGTGTGGCAAATTTATATTGCAGAAAAATACTTATTTTTATATTAAGCTTAAGTGGTTGCCTATTAATTATGTAC 102 8682043 0.903087221 28 93 704 0.912 1.45484486 0.208 0.225490196 0.368 102 8 3 114 2R:8681950-8682166 8 Acsl FBtr0100428|FBtr0333001|FBtr0100427|FBtr0100431|FBtr0100426|FBtr0100429|FBtr0088700|FBtr0100430|FBtr0088701|FBtr0088699 8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604|8681604 8682791|8682339|8683022|8682791|8682791|8682791|8682791|8682791|8682339|8682791 TGATGAGA 8mer-A1 dme-miR-2a-2-5p 2R + 8681891 8682101 3'utr Acsl FlyBase G10682.1 ATTACTCGTTTCTCATTTTAATAAAGTTCGCAAAGACTTGCTTGGCAGATATGTAGCTGAAGCTGAGTTTGGTTTGGAAATGCGCTGTGTATGTGCTAGGAATGCTGTTCAACCGATTGACAATGATAATGGTAATGATAACTGAATGCCGATGATGAGAAGGAATATTGTATACTGTACAGTTTTCGGTTTATAGTACATTGTGTGGCAA 71 8682013 0.978200447 27 71 477 1 2.025305865 0.320754717 0.281690141 0.518867925 71 0 0 106 2R:8681891-8682101 8 21 375 FBgn0263120 3324.373333 107.4633333 164.07 0.00631698 0.195415491 0.127994149 0 30 15 0.5 dme-miR-11-3p 7mer-m1 TGTGATG 2R 8718382 8718388 - 2R_8718382_8718388_- 0.491258737 0.543033428 0.517146082 0.036610241 CG14767 FBtr0088719|FBtr0088720|FBtr0088718 8718015|8718015|8718015 8718693|8718693|8718693 2R - 8718357 8718411 3'utr CG14767 FlyBase G21054.1 AAGCATTAAAGCCAAAAACATATTGTGATGCTGGCGAGGAAAGCATCAATTCCTT 27 8718389 0.962657695 7 26 131 0.96969697 1.204119983 0 0.185185185 0.333333333 27 0 1 32 2R:8718357-8718411 7 CG14767 FBtr0088718|FBtr0088720|FBtr0088719 8718015|8718015|8718015 8718693|8718693|8718693 TGTGATG 7mer-m1 dme-miR-11-3p 2R - 8718314 8718403 3'utr CG14767 FlyBase G15959.1 AAGCCAAAAACATATTGTGATGCTGGCGAGGAAAGCATCAATTCCTTTTCGGCCGCATCTGACCCGATTTTAGCTGCAACAATCTGTTAG 18 8718389 0.969018511 8 18 100 1 1.380211242 0 0.277777778 0.458333333 18 0 0 24 2R:8718314-8718403 7 17.5 376 FBgn0040777 1544.016667 90.17333333 137.3633333 0.011334075 0.194070679 0.127399355 1 1 1 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 2R 8888664 8888669 - 2R_8888664_8888669_- 0.717181625 0.514380979 0.615781302 0.143401679 CG8272 FBtr0088686|FBtr0088686|FBtr0088686|FBtr0330246|FBtr0330246|FBtr0330246 8888402|8888402|8888402|8888402|8888402|8888402 8889036|8889036|8889036|8888973|8888973|8888973 2R - 8888634 8888681 3'utr CG8272 FlyBase G21080.1 GATTGTAAATTATGTGATCGGTTGCCAAAATTAAAGTTGTTTGTTTGA 7 8888671 0.990116859 5 6 62 0.7 0.84509804 0.4 0.285714286 0.5 7 3 0 7 2R:8888634-8888681 6 CG8272 FBtr0088686|FBtr0088686|FBtr0088686|FBtr0330246|FBtr0330246|FBtr0330246 8888402|8888402|8888402|8888402|8888402|8888402 8889036|8889036|8889036|8888973|8888973|8888973 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 8888635 8888685 3'utr CG8272 FlyBase G15982.1 ACACGATTGTAAATTATGTGATCGGTTGCCAAAATTAAAGTTGTTTGTTTG 9 8888659 0.882667273 3 9 76 1 1.113943352 0.384615385 0.444444444 0.615384615 9 0 0 13 2R:8888635-8888685 6 8 377 FBgn0033337 113.6666667 4.916666667 7.516666667 0.070381232 1.627118644 1.064301552 2 -10 -4 0.5 dme-miR-965-3p 8mer-A1 TACGCTTA 2R 8944614 8944621 - 2R_8944614_8944621_- 0.497103407 0.545363117 0.521233262 0.034124761 CG8230 FBtr0088674 8944296 8944905 2R - 8944603 8944634 3'utr CG8230 FlyBase G21138.1 ACATAGACATAGCTACGCTTATACTAATGTGT 8 8944620 0.681315505 4 8 45 1 0.903089987 0 0 0 8 0 0 8 2R:8944603-8944634 8 CG8230 FBtr0088674 8944296 8944905 TACGCTTA 8mer-A1 dme-miR-965-3p 2R - 8944598 8944634 3'utr CG8230 FlyBase G16024.1 ACATAGACATAGCTACGCTTATACTAATGTGTATGTT 6 8944620 0.740289837 4 6 44 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 2R:8944598-8944634 8 7 378 FBgn0027607 600.88 26.23666667 40.29 0.011649581 0.266802185 0.173740382 -1 -1 -1 0.5 dme-miR-14-3p 8mer-A1 AAGACTGA 2R 8960983 8960990 + 2R_8960983_8960990_+ 0.492896686 0.540141037 0.516518862 0.033406765 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 2R + 8960954 8961011 3'utr babo FlyBase G14181.1 TAACGAAAACAAAACAGTAAGACTATGTCAAGACTGAGCAGCAGTGGAAAGCAGTGAG 85 8960980 0.960788884 6 66 330 0.777777778 1.886490725 0.515151515 0.152941176 0.272727273 85 22 0 77 2R:8960954-8961011 8 babo FBtr0300599|FBtr0088658|FBtr0088659 8960458|8960458|8960458 8962796|8962796|8962796 AAGACTGA 8mer-A1 dme-miR-14-3p 2R + 8960958 8961007 3'utr babo FlyBase G10788.1 GAAAACAAAACAGTAAGACTATGTCAAGACTGAGCAGCAGTGGAAAGCAG 55 8960980 0.898445185 5 41 207 0.7625 1.30820858 0.6375 0.345454545 0.55 55 17 2 61 2R:8960958-8961007 8 64.5 379 FBgn0011300 981.73 24.67666667 37.73 0.065700345 2.613805214 1.709514975 3 3 3 0.5 dme-miR-33-5p 6mer2-7 AATGCA 2R 9105994 9105999 + 2R_9105994_9105999_+ 0.75056367 0.664621145 0.707592408 0.060770595 Vang FBtr0330624|FBtr0088566 9105468|9105387 9106796|9106796 2R + 9105863 9106011 3'utr Vang FlyBase G14221.3 GTATCATCCTAAACCGACGCGAACATATCACACCCTTTGATAAGCAAACATGACTTACAAGTTCCCAAAGTATTAATTATAAGAATGATGGTTTGGCTTGCCGAACCGCGATCTTCAGATATCAACTCTTAAATGCAGCTCTTTTATAC 125 9105996 0.869110199 27 113 912 0.918367347 1.528273777 0.108843537 0.177419355 0.306122449 124 9 3 135 2R:9105863-9106011 6 Vang FBtr0330624|FBtr0088566 9105468|9105387 9106796|9106796 AATGCA 6mer2-7 dme-miR-33-5p 2R + 9105695 9106021 3'utr Vang FlyBase G10815.1 AAGTTTAGAAAGGAAAAGTTGTTGTGAGAACAAAATGTCTAGGCAGGCCTCAGCAGCTAAATTTTGATCTTGTAACAAATGATTATTAGATGAGAAGGCAACGTACTTATCAGTGCTAAACTTGAACTTATGACCCGAATATCAAGAAACAATGCTCAAAAGCCCAGTGTATCATCCTAAACCGACGCGAACATATCACACCCTTTGATAAGCAAACATGACTTACAAGTTCCCAAAGTATTAATTATAAGAATGATGGTTTGGCTTGCCGAACCGCGATCTTCAGATATCAACTCTTAAATGCAGCTCTTTTATACACGATTTTTA 161 9105996 0.896804901 44 142 1132 0.902542373 1.425289616 0.199152542 0.347826087 0.555084746 161 16 7 213 2R:9105695-9106021 6 69 380 FBgn0015838 1538.993333 53.09333333 81.26666667 0.044834502 1.299598192 0.849056604 -2 -2 -2 0.5 dme-miR-277-3p 7mer-m8 TGCATTT 2R 9106357 9106363 + 2R_9106357_9106363_+ 0.594991023 0.606552416 0.600771719 0.008175144 Vang FBtr0330624|FBtr0088566 9105468|9105387 9106796|9106796 2R + 9106296 9106373 3'utr Vang FlyBase G14224.1 CAACTATAACTCGAATGCAACTGATGACAAATACATAATATAAGCGAAGACTGCCTGAATATGCATTTTATACACACA 50 9106352 0.767491 11 47 248 0.964912281 1.740362689 0.070175439 0.14 0.245614035 50 2 0 55 2R:9106296-9106373 7 Vang FBtr0330624|FBtr0088566 9105468|9105387 9106796|9106796 TGCATTT 7mer-m8 dme-miR-277-3p 2R + 9106301 9106525 3'utr Vang FlyBase G10818.1 ATAACTCGAATGCAACTGATGACAAATACATAATATAAGCGAAGACTGCCTGAATATGCATTTTATACACACAAATTGCCAACAGCCACTAGCAGGTGTATGTACTAGCCTGTGCATAGCAACCACATATATACAAAAACTCGTGTATTTTTAGAGACAAAATTATAGTGATAAGGACCCGAATTCGTATTCGAACATGTGTACGTTCCAGTGAACCCAATCTAT 93 9106351 0.969636089 28 88 494 0.937931034 2.133538908 0.172413793 0.397849462 0.613793103 93 9 0 136 2R:9106301-9106525 7 16.5 381 FBgn0015838 1538.993333 53.09333333 81.26666667 0.010721294 0.310773481 0.203035275 5 6 5.5 0.5 dme-miR-282-5p 8mer-A1 AGAGGCTA 2R 9120674 9120681 + 2R_9120674_9120681_+ 0.632871227 0.636259818 0.634565523 0.002396102 Su(var)2-10 FBtr0088577|FBtr0088570|FBtr0088575 9120537|9120537|9120537 9120816|9120816|9120816 2R + 9120631 9120719 3'utr Su(var)2-10 FlyBase G14248.1 TTTTCGGTTTCACTTCCGGTGGCGCACGGCCACATATTACCTTAGAGGCTATTCTTCGGCGTTCGATTCGCCGCCTTGCATCACCTCAT 36 9120673 0.985591309 9 35 289 0.953488372 1.612783857 0.069767442 0.194444444 0.325581395 36 2 0 41 2R:9120631-9120719 8 Su(var)2-10 FBtr0088575|FBtr0088570|FBtr0088577 9120537|9120537|9120537 9120816|9120816|9120816 AGAGGCTA 8mer-A1 dme-miR-282-5p 2R + 9120656 9120695 3'utr Su(var)2-10 FlyBase G10846.1 ACGGCCACATATTACCTTAGAGGCTATTCTTCGGCGTTCG 20 9120673 0.771858149 4 17 148 0.857142857 1.380211242 0.142857143 0.35 0.535714286 20 4 0 24 2R:9120656-9120695 8 25 382 FBgn0003612 1532.696667 79.66 122.23 0.01631112 0.313833794 0.204532439 1 1 1 0.5 dme-miR-965-3p 6mer3-8 TACGCT 2R 9123400 9123405 - 2R_9123400_9123405_- 0.57412268 0.56343844 0.56878056 0.007554941 CG18659 FBtr0339371|FBtr0306382|FBtr0339372|FBtr0088626|FBtr0306381|FBtr0302497|FBtr0302498 9123302|9123302|9123302|9123302|9123302|9123302|9123302 9127111|9125499|9123701|9123701|9127111|9123701|9123701 2R - 9123308 9123462 3'utr CG18659 FlyBase G21196.1 TTTAACAATTGCATGAATCGGAACTCTCGCTAACTACGCATACTTACATACATATTGTACGCTGGACTTCCAAATCAAAAGACACAAGAATCTAGAGTAGCATGAATTTAAGCCAATTAGCCTAACAAATTACCAATAAATATAAAATAAATTCC 113 9123396 0.962317556 17 109 561 0.970588235 1.819543936 0.139705882 0.168141593 0.308823529 113 3 1 132 2R:9123308-9123462 6 CG18659 FBtr0339372|FBtr0306382|FBtr0339371|FBtr0302498|FBtr0302497|FBtr0306381|FBtr0088626 9123302|9123302|9123302|9123302|9123302|9123302|9123302 9123701|9125499|9127111|9123701|9123701|9127111|9123701 TACGCT 6mer3-8 dme-miR-965-3p 2R - 9123320 9123459 3'utr CG18659 FlyBase G16073.1 AACAATTGCATGAATCGGAACTCTCGCTAACTACGCATACTTACATACATATTGTACGCTGGACTTCCAAATCAAAAGACACAAGAATCTAGAGTAGCATGAATTTAAGCCAATTAGCCTAACAAATTACCAATAAATAT 87 9123399 0.964967362 16 85 445 0.967479675 1.598425707 0.097560976 0.310344828 0.512195122 87 2 2 119 2R:9123320-9123459 6 77 383 FBgn0027561 809.6966667 28.81666667 43.97666667 0.095097341 2.672064777 1.750928523 -9 -6 -7.5 0.5 dme-miR-283-5p 6mer3-8 TGATAT 2R 9135184 9135189 + 2R_9135184_9135189_+ 0.414681744 0.537651101 0.476166423 0.086952497 Hydr1 FBtr0300180|FBtr0339361|FBtr0339360|FBtr0302496|FBtr0088580 9135052|9135052|9135052|9135052|9135052 9135453|9135453|9135453|9135453|9135453 2R + 9135074 9135254 3'utr Hydr1 FlyBase G14265.1 GGTCGGTCGGTCCGCTAGTCTAGTTCAGTTTTTGTCCAGTTGAACACGTAGATATACGAGAATGTTTGTATTCCGATAGATTGCCGTCGGCGAAGACTCTTGTACACATGTGATATGAAACGTTGATCAAAATCCAAAGTGTTGTTATACTTATATACAGCGAACAGGGAACCAAATTATC 55 9135174 0.978282638 20 51 338 0.930555556 1.826074803 0.208333333 0.236363636 0.416666667 55 5 0 67 2R:9135074-9135254 6 Hydr1 FBtr0088580|FBtr0302496|FBtr0339360|FBtr0339361|FBtr0300180 9135052|9135052|9135052|9135052|9135052 9135453|9135453|9135453|9135453|9135453 TGATAT 6mer3-8 dme-miR-283-5p 2R + 9135130 9135221 3'utr Hydr1 FlyBase G10857.1 CGAGAATGTTTGTATTCCGATAGATTGCCGTCGGCGAAGACTCTTGTACACATGTGATATGAAACGTTGATCAAAATCCAAAGTGTTGTTAT 35 9135173 0.928514117 14 33 199 0.942307692 1.389166084 0.173076923 0.314285714 0.538461538 35 2 1 49 2R:9135130-9135221 6 21 384 FBgn0033382 206.7266667 10.77333333 16.46666667 0.101583411 1.949257426 1.275303644 10 11 10.5 0.5 dme-miR-317-3p 8mer-A1 TGTGTTCA 2R 9204658 9204665 - 2R_9204658_9204665_- 0.506640986 0.491992474 0.49931673 0.010358054 CG8027 FBtr0088609 9204408 9204905 2R - 9204639 9204689 3'utr CG8027 FlyBase G21307.1 CCAGCTTTTGCAGTCGACCTGTTTTGTGTTCAGTTTCATAATATCTAAGTT 59 9204666 0.718233928 9 57 685 0.955223881 1.329058719 0.343283582 0.101694915 0.208955224 59 1 2 64 2R:9204639-9204689 8 CG8027 FBtr0088609 9204408 9204905 TGTGTTCA 8mer-A1 dme-miR-317-3p 2R - 9204640 9204685 3'utr CG8027 FlyBase G16159.1 CTTTTGCAGTCGACCTGTTTTGTGTTCAGTTTCATAATATCTAAGT 47 9204666 0.722405198 6 45 523 0.961538462 1.875061263 0.371794872 0.425531915 0.653846154 47 3 0 75 2R:9204640-9204685 8 52 385 FBgn0033392 84.66666667 3.863333333 5.83 0.614173228 13.45987921 8.919382504 1 1 1 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 2R 9204863 9204869 - 2R_9204863_9204869_- 0.62233708 0.658534004 0.640435542 0.025595073 CG8027 FBtr0088609|FBtr0088609|FBtr0088609 9204408|9204408|9204408 9204905|9204905|9204905 2R - 9204764 9204943 stop_codon CG8027 FlyBase G21308.1 AGGCGAAGCTGGTGAGGCGCTGTGTGCAGCGCTTGTAGGATCGATTTCGTGAAGTTCTCTCCCTTCTGCAATGTTGTGATATGTTGTGAACATTTATGTAAATTGGCCATTTCTGCAAGCGATCATAGTCAAATCTAGTTGTAGGCCATGTGTAAGGCTATTTTTCTAGTTCTTTAGGTG 57 9204871 0.841418001 22 54 535 0.945945946 1.367976785 0.135135135 0.228070175 0.405405405 57 2 2 70 2R:9204764-9204943 7 CG8027 FBtr0088609|FBtr0088609|FBtr0088609 9204408|9204408|9204408 9204905|9204905|9204905 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 2R - 9204850 9204895 3'utr CG8027 FlyBase G16162.1 GTGAAGTTCTCTCCCTTCTGCAATGTTGTGATATGTTGTGAACATT 26 9204871 0.724780626 9 25 265 0.971428571 1.531478917 0.314285714 0.269230769 0.457142857 26 1 0 34 2R:9204850-9204895 7 24 386 FBgn0033392 84.66666667 3.863333333 5.83 0.283464567 6.212251941 4.116638079 2 2 2 0.5 dme-miR-1003-3p 8mer-A1 ATGTGAGA 2R 9434853 9434860 - 2R_9434853_9434860_- 0.576233276 0.611991761 0.594112518 0.025285078 ced-6 FBtr0306808|FBtr0088549|FBtr0088548|FBtr0088550|FBtr0339384 9434667|9434667|9434667|9434667|9434667 9435274|9435274|9435274|9435274|9435274 2R - 9434684 9434998 3'utr ced-6 FlyBase G21372.1 AGAAACAACCGCAATGCACCTTGTTTAAACGTATCAATTTGTTGCTGTAGTTGAATAGATTAATTGATGGTCGAGTAAAGCGAATGAAAAAATGTTAACAAGTGATAAATGTGAAAATTGCTAAACAATGCTAACTGAATGTGAGAATTTTGTATAAAATAATTATAAAGACATAACCAGAAGCAAATGAATCGATTACTGTATAGAGCCGAAATACGAGGAGAATTAAAGCAAAATGAACAATATTTAATGTTATTGATGCAATATAGAGAAATATTATTATTACTATTATTATTGTGTACGTAAAGAATAAAA 201 9434864 0.976622056 49 190 1321 0.948207171 2.376576957 0.151394422 0.208955224 0.366533865 201 13 0 238 2R:9434684-9434998 8 ced-6 FBtr0339384|FBtr0088550|FBtr0088548|FBtr0088549|FBtr0306808 9434667|9434667|9434667|9434667|9434667 9435274|9435274|9435274|9435274|9435274 ATGTGAGA 8mer-A1 dme-miR-1003-3p 2R - 9434718 9435033 3'utr ced-6 FlyBase G16210.1 TGATAATAATCTGAGGTCAAGATCAAAAGAACACAAGAAACAACCGCAATGCACCTTGTTTAAACGTATCAATTTGTTGCTGTAGTTGAATAGATTAATTGATGGTCGAGTAAAGCGAATGAAAAAATGTTAACAAGTGATAAATGTGAAAATTGCTAAACAATGCTAACTGAATGTGAGAATTTTGTATAAAATAATTATAAAGACATAACCAGAAGCAAATGAATCGATTACTGTATAGAGCCGAAATACGAGGAGAATTAAAGCAAAATGAACAATATTTAATGTTATTGATGCAATATAGAGAAATATTATT 155 9434869 0.977406578 47 140 923 0.916317992 1.86332286 0.209205021 0.393548387 0.606694561 155 18 2 219 2R:9434718-9435033 8 67.5 387 FBgn0029092 3414.266667 169.59 258.2733333 0.019769985 0.398018751 0.261351023 4 9 6.5 0.5 dme-miR-184-3p 8mer-A1 TCCGTCCA 2R 9478755 9478762 + 2R_9478755_9478762_+ 0.600625371 0.617197709 0.60891154 0.011718386 Camta FBtr0339381 9477617 9480076 2R + 9478746 9478789 3'utr Camta FlyBase G14349.1 TTATTTTTGTCCGTCCACATTGTTAGCTTTCATAACATACCAAC 6 9478751 0.990542169 4 4 50 0.875 0.84509804 0.25 0.166666667 0.375 6 1 0 7 2R:9478746-9478789 8 Camta FBtr0339381 9477617 9480076 TCCGTCCA 8mer-A1 dme-miR-184-3p 2R + 9478743 9478780 3'utr Camta FlyBase G10924.1 AAATTATTTTTGTCCGTCCACATTGTTAGCTTTCATAA 6 9478751 0.670195448 4 5 63 1 1 0.2 0.5 0.7 6 0 0 10 2R:9478743-9478780 8 5 388 FBgn0259234 576.11 9.96 15.38666667 0.008678898 0.502008032 0.324956672 4 4 4 0.5 dme-bantam-3p 6mer3-8 TGATCT 2R 9567052 9567057 - 2R_9567052_9567057_- 0.814102873 0.982201188 0.898152031 0.118863448 Not1 FBtr0304957 9566144 9567977 2R - 9566889 9567095 3'utr Not1 FlyBase G21398.1 AGCAGCCACTGCAACATTAACCAGAACCAACCAATGTTTGATCTTCTTATACGCAATATAAGCGATACGTTTTGTTTTAACCTACATTATTTTATGAACTGATTATTAACTGAAATGGAAATACATTGAACACATCTAGCTTGTTAAACGTATAATCGATCCTCCATGTAAAGATAAACGCTGTTAGAATCAGATAGATGAGTGAAT 152 9567049 0.875676875 42 137 1205 0.90052356 1.457377197 0.120418848 0.230263158 0.387434555 152 14 5 172 2R:9566889-9567095 6 Not1 FBtr0304957 9566144 9567977 TGATCT 6mer3-8 dme-bantam-3p 2R - 9567018 9567092 3'utr Not1 FlyBase G16239.1 AGCCACTGCAACATTAACCAGAACCAACCAATGTTTGATCTTCTTATACGCAATATAAGCGATACGTTTTGTTTT 56 9567058 0.934499158 12 54 454 0.9625 1.886490725 0.0625 0.267857143 0.4875 56 3 0 77 2R:9567018-9567092 6 54 389 FBgn0085436 10306.14667 124.2833333 191.6566667 0.005239592 0.434491082 0.281753831 -8 1 -3.5 0.5 dme-miR-305-3p 7mer-m1 TGTGCCG 2R 9592554 9592560 + 2R_9592554_9592560_+ 0.515199679 0.681101548 0.598150613 0.117310288 Map60 FBtr0088530 9592414 9592744 2R + 9592516 9592575 3'utr Map60 FlyBase G14378.1 TATCGTATTATTTTTTCCGTGTTCAAACGTCTGCGTTCTGTGCCGCCCACTTGTAAAATG 59 9592556 0.982674582 8 55 412 0.924242424 1.183269844 0.333333333 0.084745763 0.181818182 59 2 3 61 2R:9592516-9592575 7 Map60 FBtr0088530 9592414 9592744 TGTGCCG 7mer-m1 dme-miR-305-3p 2R + 9592528 9592579 3'utr Map60 FlyBase G10944.1 TTTTCCGTGTTCAAACGTCTGCGTTCTGTGCCGCCCACTTGTAAAATGTATT 56 9592555 0.783456265 9 50 383 0.840909091 1.392110465 0.238636364 0.392857143 0.613636364 56 12 2 74 2R:9592528-9592579 7 55 390 FBgn0010342 1158.76 77.84 119.11 0.047464531 0.706577595 0.461758039 -2 -1 -1.5 0.5 dme-miR-1002-5p 6mer3-8 CTACTT 2R 9592697 9592702 + 2R_9592697_9592702_+ 0.759161599 0.883502925 0.821332262 0.087922576 Map60 FBtr0088530 9592414 9592744 2R + 9592642 9592709 3'utr Map60 FlyBase G14380.1 AATGTATTTCTAATATTTGAGATTTCGAATTTGTCCCTATTTAAGGTTGAATATGCTACTTGATTTTA 13 9592694 0.989261666 7 12 127 0.941176471 1.204119983 0.058823529 0.230769231 0.411764706 13 1 0 16 2R:9592642-9592709 6 Map60 FBtr0088530 9592414 9592744 CTACTT 6mer3-8 dme-miR-1002-5p 2R + 9592643 9592713 3'utr Map60 FlyBase G10945.2 ATGTATTTCTAATATTTGAGATTTCGAATTTGTCCCTATTTAAGGTTGAATATGCTACTTGATTTTAAAAT 11 9592693 0.989272958 10 10 91 0.882352941 1.176091259 0 0.363636364 0.588235294 11 2 0 15 2R:9592643-9592713 6 6 391 FBgn0010342 1158.76 77.84 119.11 0.005177949 0.077081192 0.050373604 3 4 3.5 0.5 dme-miR-277-3p 7mer-m8 TGCATTT 2R 9688649 9688655 - 2R_9688649_9688655_- 0.603964904 0.452190597 0.52807775 0.107320637 Uba1 FBtr0339517|FBtr0088499 9688287|9688287 9688767|9688767 2R - 9688527 9688676 3'utr Uba1 FlyBase G21476.2 AGGAGTTACTGTCTAGCTGTTTGCATTTTAATTTTCACAACACCATTACGAGAGCAGCCCAGATCTAGAAATTATATAAAATGTGTGTGAATCCTCTAAGGAATGGCAAAATAATACGCATCATACGAAATACAAAGACTCGACTAAAAG 33 9688656 0.978934507 14 30 218 0.923076923 1.079181246 0.153846154 0.181818182 0.307692308 33 1 2 36 2R:9688527-9688676 7 Uba1 FBtr0339517|FBtr0088499 9688287|9688287 9688767|9688767 TGCATTT 7mer-m8 dme-miR-277-3p 2R - 9688569 9688727 3'utr Uba1 FlyBase G16298.1 GATCCCGTTTTGTTGTCGGCGACGCGTTTTGGAATCGCGCAGCTCCAACGAAGGAGTTACTGTCTAGCTGTTTGCATTTTAATTTTCACAACACCATTACGAGAGCAGCCCAGATCTAGAAATTATATAAAATGTGTGTGAATCCTCTAAGGAATGGCA 27 9688655 0.984298163 15 24 194 0.909090909 1.602059991 0.25 0.481481481 0.681818182 27 4 0 40 2R:9688569-9688727 7 9.5 392 FBgn0023143 3506.563333 97.42 149.3233333 0.002709205 0.09751591 0.063620332 1 0 0.5 0.5 dme-bantam-3p 7mer-m8 TGATCTC 2R 9715858 9715864 + 2R_9715858_9715864_+ 0.634128391 0.655586618 0.644857504 0.015173239 dap FBtr0088469 9715082 9716256 2R + 9715780 9715955 3'utr dap FlyBase G14412.1 TGAATGCCGCCGAATGGACACAAATTGTCGCGCTCTCATTTCTTAACCAGTGCTAAAAATGTCTTTTATGATTTGCTATGATCTCTGGGCAAATTATGAAAACAATTTTGCCTGAAACTATCATGTACAAAAACTAGATTATTATACATACTATACACATAGGCAGAGCCTATTCT 1243 9715858 0.984773314 31 1202 9666 0.966003849 1.922552467 0.050032072 0.201930813 0.363694676 1243 36 17 1506 2R:9715780-9715955 7 dap FBtr0088469 9715082 9716256 TGATCTC 7mer-m8 dme-bantam-3p 2R + 9715780 9715926 3'utr dap FlyBase G10962.1 TGAATGCCGCCGAATGGACACAAATTGTCGCGCTCTCATTTCTTAACCAGTGCTAAAAATGTCTTTTATGATTTGCTATGATCTCTGGGCAAATTATGAAAACAATTTTGCCTGAAACTATCATGTACAAAAACTAGATTATTATAC 818 9715858 0.941397623 28 782 6291 0.955028618 2.026050158 0.061324612 0.376528117 0.582992641 818 45 10 1168 2R:9715780-9715926 7 930 393 FBgn0010316 804.5033333 38.63 59.20333333 1.155992724 24.07455346 15.70857497 0 0 0 0.5 dme-miR-317-3p 7mer-m8 TGTGTTC 2R 9962909 9962915 + 2R_9962909_9962915_+ 0.544532942 0.650012319 0.597272631 0.074585199 Pal1 FBtr0339422 9962739 9963031 2R + 9962864 9962930 3'utr Pal1 FlyBase G14481.1 ACGCTTTTTTTGGTGTCGTTAATTACACAGCATGTCCACTTCTTGTGTGTTCTGTATTCGTTGGCTT 14 9962916 0.659987744 6 13 153 0.944444444 1.230448921 0.055555556 0.142857143 0.333333333 14 1 0 17 2R:9962864-9962930 7 Pal1 FBtr0339422 9962739 9963031 TGTGTTC 7mer-m8 dme-miR-317-3p 2R + 9962890 9962948 3'utr Pal1 FlyBase G11012.1 ACAGCATGTCCACTTCTTGTGTGTTCTGTATTCGTTGGCTTACTTTTCGTTCAACTTTA 17 9962907 0.992088512 7 14 165 1 1.397940009 0 0.352941176 0.56 17 0 0 25 2R:9962890-9962948 7 11 394 FBgn0033466 329.6666667 20.27 30.62666667 0.033367037 0.542673902 0.359164127 -7 2 -2.5 0.5 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 10591542 10591549 + 3L_10591542_10591549_+ 0.660967754 0.660398711 0.660683232 0.000402414 A2bp1 FBtr0305093|FBtr0305096|FBtr0332985|FBtr0305095 10590564|10590564|10590564|10590564 10593403|10593403|10594012|10594012 3L + 10591502 10591688 5'utr A2bp1 FlyBase G29412.1 AATGCATTGCTTGGTTGTTCCTAATAATTTTATATATTTTGGCAGCTAAAACCACTCACACTCAACTCACGACTCAATTCGAATTGCTCAAAAAAAAATCGTAGCGCATAGGTAAATGCAAAAGATCAACACGTAGACATATCCTTGGAATATACAATAATATTTACTTTAAATGCCGCCATAGCAG 121 10591541 0.983832149 19 112 862 0.927631579 1.848189117 0.019736842 0.214876033 0.375 121 10 1 141 3L:10591502-10591688 8 A2bp1 FBtr0305095|FBtr0332985|FBtr0305096|FBtr0305093 10590564|10590564|10590564|10590564 10594012|10594012|10593403|10593403 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L + 10591502 10591564 5'utr A2bp1 FlyBase G22256.1 AATGCATTGCTTGGTTGTTCCTAATAATTTTATATATTTTGGCAGCTAAAACCACTCACACTC 74 10591541 0.769587865 12 67 530 0.919191919 1.658011397 0 0.256756757 0.444444444 74 7 1 91 3L:10591502-10591564 8 82.5 395 FBgn0052062 354.2866667 11.58666667 17.8 0.232862277 7.120253165 4.634831461 1 1 1 0.5 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 10592110 10592117 + 3L_10592110_10592117_+ 0.650570963 0.653812759 0.652191861 0.002292299 A2bp1 FBtr0305093|FBtr0305096|FBtr0332985|FBtr0305095 10590564|10590564|10590564|10590564 10593403|10593403|10594012|10594012 3L + 10592071 10592136 5'utr A2bp1 FlyBase G29413.1 ATGCTCAATGGAAAATAAGCGAACAAACTTTGATTCTTAGGCAGCTACTGTCGTCAAATTTAAACT 76 10592108 0.988454678 11 69 628 0.913978495 1.327358934 0.161290323 0.197368421 0.344086022 76 5 3 85 3L:10592071-10592136 8 A2bp1 FBtr0305095|FBtr0332985|FBtr0305096|FBtr0305093 10590564|10590564|10590564|10590564 10594012|10594012|10593403|10593403 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L + 10592087 10592133 5'utr A2bp1 FlyBase G22258.1 AAGCGAACAAACTTTGATTCTTAGGCAGCTACTGTCGTCAAATTTAA 56 10592108 0.800372247 9 51 483 0.93258427 1.618048097 0.247191011 0.428571429 0.640449438 56 5 1 83 3L:10592087-10592133 8 65 396 FBgn0052062 354.2866667 11.58666667 17.8 0.183467249 5.609896433 3.651685393 2 2 2 0.5 dme-miR-283-5p 8mer-m1 TGATATTT 3L 10664398 10664405 + 3L_10664398_10664405_+ 0.467466667 0.387170378 0.427318523 0.056778058 CG32068 FBtr0113421 10664364 10664435 3L + 10664374 10664433 3'utr CG32068 FlyBase G29436.1 AATCTTATCTTTTACCATCAAGTTTGATATTTTGAAATATAAAATCGCTGTGTATAATCA 21 10664397 0.793768151 8 20 189 0.96 1.380211242 0.2 0.095238095 0.24 21 1 0 24 3L:10664374-10664433 8 CG32068 FBtr0113421 10664364 10664435 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 10664382 10664415 3'utr CG32068 FlyBase G22277.1 CTTTTACCATCAAGTTTGATATTTTGAAATATAA 8 10664397 0.757373083 3 6 72 0.818181818 0.954242509 0.090909091 0.375 0.545454545 8 2 0 9 3L:10664382-10664415 8 10 397 FBgn0052068 230.5566667 42.00666667 63.54666667 0.043373285 0.238057451 0.157364666 1 1 1 0.5 dme-miR-283-5p 8mer-m1 TGATATTT 3L 11059485 11059492 + 3L_11059485_11059492_+ 0.336489585 0.510687466 0.423588525 0.123176516 CG7888 FBtr0076200|FBtr0076199|FBtr0076201 11059249|11059249|11059249 11059659|11059659|11059659 3L + 11059455 11059522 3'utr CG7888 FlyBase G29503.1 TGTGTATTTGTATAGAATTTAACAGATTTGTGATATTTTTAGCGTCATGCCCAAGAATCTGTACAACA 88 11059481 0.821243861 12 82 894 0.956521739 1.56427143 0.043478261 0.227272727 0.408695652 88 3 2 110 3L:11059455-11059522 8 CG7888 FBtr0076201|FBtr0076200|FBtr0076199 11059249|11059249|11059249 11059659|11059659|11059659 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 11059458 11059526 3'utr CG7888 FlyBase G22326.2 GTATTTGTATAGAATTTAACAGATTTGTGATATTTTTAGCGTCATGCCCAAGAATCTGTACAACAAACG 43 11059481 0.811333434 11 39 396 0.867647059 1.071882007 0.088235294 0.441860465 0.647058824 43 5 4 59 3L:11059458-11059526 8 56 398 FBgn0036116 3.67 0.246666667 0.366666667 15.25885559 227.027027 152.7272727 4 4 4 0.5 dme-miR-932-5p 7mer-A1 GAATTGA 3L 11178282 11178288 - 3L_11178282_11178288_- 0.788924176 0.748350473 0.768637325 0.028689938 GlcAT-P FBtr0076190|FBtr0306254|FBtr0076189|FBtr0100422|FBtr0306255 11176952|11176952|11176952|11176952|11176952 11178417|11178417|11178417|11178417|11178417 3L - 11178246 11178320 3'utr GlcAT-P FlyBase G36087.2 AGGTACAATCCGGCGCACGGAGATACCAATCAGAATTGATCAGATCATTAGTCGGTGTACATTATTATCATAATC 78 11178285 0.736333693 10 72 412 0.948979592 1.667452953 0.214285714 0.207792208 0.37755102 77 4 1 93 3L:11178246-11178320 7 GlcAT-P FBtr0076190|FBtr0306255|FBtr0100422|FBtr0076189|FBtr0306254 11176952|11176952|11176952|11176952|11176952 11178417|11178417|11178417|11178417|11178417 GAATTGA 7mer-A1 dme-miR-932-5p 3L - 11178167 11178318 3'utr GlcAT-P FlyBase G27282.2 GTACAATCCGGCGCACGGAGATACCAATCAGAATTGATCAGATCATTAGTCGGTGTACATTATTATCATAATCATATGATTAGTTAGGCTCTAAGCGCACACATACCTATGATAATTCTTTGCACCGTAGTCTTTGTTTGTTCGCACACCTA 77 11178285 0.746255967 19 73 461 0.930434783 2.029383778 0.156521739 0.363636364 0.573913043 77 8 0 107 3L:11178167-11178318 7 61.5 399 FBgn0036144 1851.176667 64.88333333 98.86 0.033222113 0.947855125 0.622091847 -3 -3 -3 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 11496018 11496024 + 3L_11496018_11496024_+ 0.570260722 0.574459809 0.572360266 0.002969212 chrb FBtr0076093|FBtr0076093|FBtr0076093|FBtr0344910|FBtr0344910|FBtr0344910 11495094|11495094|11495094|11495094|11495094|11495094 11499055|11499055|11499055|11499055|11499055|11499055 3L + 11495994 11496040 3'utr chrb FlyBase G29591.1 TAACAAATATAAAAACAAAGTTGATGTGATATTATATAATAATTATG 53 11496015 0.851912783 6 51 498 0.965517241 1.748188027 0.034482759 0.075471698 0.155172414 53 2 0 56 3L:11495994-11496040 7 chrb FBtr0076093|FBtr0076093|FBtr0076093|FBtr0344910|FBtr0344910|FBtr0344910 11495094|11495094|11495094|11495094|11495094|11495094 11499055|11499055|11499055|11499055|11499055|11499055 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 11495959 11496040 3'utr chrb FlyBase G22395.1 TCGATCAATCGAGGCAGAAAGAGGAAAGTTAATAATAACAAATATAAAAACAAAGTTGATGTGATATTATATAATAATTATG 43 11496015 0.989287264 8 39 372 0.933333333 1.748188027 0.05 0.372093023 0.55 43 4 0 56 3L:11495959-11496040 7 46 400 FBgn0036165 903.39 19.18 29.98 0.050919315 2.398331595 1.534356237 3 3 3 0.5 dme-miR-11-3p 8mer-m1 CTGTGATG 3L 11642549 11642556 + 3L_11642549_11642556_+ 0.376548579 0.386594148 0.381571364 0.007103241 CG32091 FBtr0076106 11642492 11642902 3L + 11642497 11642597 3'utr CG32091 FlyBase G29620.1 TGAAACCAATATTCCAGATGAATCTTATCCCTAGCTTTAGGCAATGTCAATGCTGTGATGTTCGATTTTAAACAGACAGATAGATACTTCCTGTACATACT 56 11642547 0.985532041 11 55 457 0.986111111 1.851258349 0.111111111 0.196428571 0.375 56 1 0 71 3L:11642497-11642597 8 CG32091 FBtr0076106 11642492 11642902 CTGTGATG 8mer-m1 dme-miR-11-3p 3L + 11642523 11642574 3'utr CG32091 FlyBase G22414.1 ATCCCTAGCTTTAGGCAATGTCAATGCTGTGATGTTCGATTTTAAACAGACA 37 11642547 0.828858196 4 34 295 0.929824561 1.72427587 0.140350877 0.416666667 0.631578947 36 4 0 53 3L:11642523-11642574 8 41.5 401 FBgn0052091 18 0.773333333 1.216666667 2.305555556 53.6637931 34.10958904 2 2 2 0.5 dme-miR-1008-3p 7mer-A1 GCTGTGA 3L 11650746 11650752 - 3L_11650746_11650752_- 0.340249881 0.325209664 0.332729772 0.010635027 CG32085 FBtr0076133 11650515 11650969 3L - 11650735 11650835 3'utr CG32085 FlyBase G36203.1 AAGTTCCTCGCGTGCTATGTGACTTTAACTTTCCGTCAACACTGTACTCTATCCCTTATAGTTTTAGACTTATTTTGATTTCTGCTGTGATTTGATACGGA 50 11650744 0.743598742 21 48 494 0.970588235 1.51851394 0.323529412 0.26 0.455882353 50 1 1 66 3L:11650735-11650835 7 CG32085 FBtr0076133 11650515 11650969 GCTGTGA 7mer-A1 dme-miR-1008-3p 3L - 11650731 11650772 3'utr CG32085 FlyBase G27361.1 TTAGACTTATTTTGATTTCTGCTGTGATTTGATACGGAACTT 33 11650744 0.667713719 8 31 317 1 1.716003344 0.365384615 0.393939394 0.615384615 33 0 0 52 3L:11650731-11650772 7 31 402 FBgn0052085 2.333333333 0.09 0.133333333 13.28571429 344.4444444 232.5 -8 -8 -8 0.5 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 11688588 11688595 + 3L_11688588_11688595_+ 0.404126081 0.403888482 0.404007281 0.000168009 Sug FBtr0273362 11688459 11688825 3L + 11688565 11688617 3'utr Sug FlyBase G29641.1 ATGCAGTGGATACGCTGGCCATTGTACTTAAACCACCATATATTTTGTAAGAT 116 11688587 0.77378824 3 110 727 0.969924812 1.809559715 0.015037594 0.129310345 0.240601504 116 3 1 129 3L:11688565-11688617 8 Sug FBtr0273362 11688459 11688825 GTACTTAA 8mer-A1 dme-miR-252-5p 3L + 11688565 11688606 3'utr Sug FlyBase G22429.1 ATGCAGTGGATACGCTGGCCATTGTACTTAAACCACCATATA 71 11688587 0.759257945 2 71 424 1 2.017033339 0 0.352112676 0.557692308 71 0 0 104 3L:11688565-11688606 8 92.5 403 FBgn0036191 390.82 14.43333333 22.11666667 0.236681848 6.408775982 4.18236624 1 1 1 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 11689729 11689734 + 3L_11689729_11689734_+ 0.987241121 0.819927476 0.903584298 0.118308581 Sug FBtr0344966|FBtr0344966|FBtr0344966|FBtr0300100|FBtr0300100|FBtr0300100 11689180|11689180|11689180|11689180|11689180|11689180 11690155|11690155|11690155|11690155|11690155|11690155 3L + 11689720 11689755 3'utr Sug FlyBase G29646.1 TTTTTTTTTCTGTGAAATCTCTTAAGTGCTTACTTA 6 11689728 0.60911767 4 6 69 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3L:11689720-11689755 6 Sug FBtr0344966|FBtr0344966|FBtr0344966|FBtr0300100|FBtr0300100|FBtr0300100 11689180|11689180|11689180|11689180|11689180|11689180 11690155|11690155|11690155|11690155|11690155|11690155 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 11689722 11689749 3'utr Sug FlyBase G22433.1 TTTTTTTCTGTGAAATCTCTTAAGTGCT 5 11689742 0.645295107 3 5 43 1 0.84509804 0.285714286 0.4 0.571428571 5 0 0 7 3L:11689722-11689749 6 5 404 FBgn0036191 390.82 14.43333333 22.11666667 0.012793613 0.346420323 0.226073851 1 -13 -6 0.5 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 3L 11700022 11700029 - 3L_11700022_11700029_- 0.572996691 0.580425059 0.576710875 0.005252672 CG11658 FBtr0076126 11699494 11700696 3L - 11700003 11700050 3'utr CG11658 FlyBase G36217.1 TTAACGTTTATCAGCTGCTTTTGGTGCTAAATCGTATTATAAGTTACA 128 11700030 0.753466129 5 124 1365 0.972413793 2.149219113 0.137931034 0.125 0.227586207 128 4 0 141 3L:11700003-11700050 8 CG11658 FBtr0076126 11699494 11700696 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 3L - 11700004 11700050 3'utr CG11658 FlyBase G27374.1 TTAACGTTTATCAGCTGCTTTTGGTGCTAAATCGTATTATAAGTTAC 74 11700030 0.735024211 8 71 748 0.972972973 2.033423755 0.126126126 0.364864865 0.576576577 74 3 0 108 3L:11700004-11700050 8 100.5 405 FBgn0036196 52.87 2.63 4.06 1.900888973 38.21292776 24.75369458 1 1 1 0.5 dme-miR-965-3p 8mer-A1 TACGCTTA 3L 11826959 11826966 - 3L_11826959_11826966_- 0.621501273 0.618810544 0.620155908 0.001902683 CycA FBtr0304650 11826717 11827651 3L - 11826842 11827051 3'utr CycA FlyBase G36271.1 TAAAAAACTCACACTGATCGTGCTCAGAACGGCAGGCAGCCGTGGAATGTTGCTAAACTCTTGTTCTTGTAATCTTGTAATCTTATACGCTTACTAAATGTTTACTAAACTTAGTCTAGACCATCTTGCGACCACATATGTAGCTAGAATAGAGCGCTGCCGAAATGCGTACAGCCAGATGATGGGTCTTACTTTACACTTAGGTTTATG 90 11826967 0.953024251 28 82 708 0.91509434 1.384711743 0.150943396 0.166666667 0.29245283 90 6 3 97 3L:11826842-11827051 8 CycA FBtr0304650 11826717 11827651 TACGCTTA 8mer-A1 dme-miR-965-3p 3L - 11826893 11827009 3'utr CycA FlyBase G27411.1 TGGAATGTTGCTAAACTCTTGTTCTTGTAATCTTGTAATCTTATACGCTTACTAAATGTTTACTAAACTTAGTCTAGACCATCTTGCGACCACATATGTAGCTAGAATAGAGCGCTG 55 11826967 0.849991589 14 47 549 0.845238095 1.374137094 0.154761905 0.436363636 0.630952381 55 11 2 71 3L:11826893-11827009 8 43 406 FBgn0000404 2869.163333 125.9133333 194.37 0.014986947 0.341504739 0.221227556 1 1 1 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 11827114 11827119 - 3L_11827114_11827119_- 0.838167161 0.674512993 0.756340077 0.115720995 CycA FBtr0076075|FBtr0076075|FBtr0076075|FBtr0304650|FBtr0304650|FBtr0304650 11827081|11827081|11827081|11826717|11826717|11826717 11827651|11827651|11827651|11827651|11827651|11827651 3L - 11827097 11827140 3'utr CycA FlyBase G36272.1 ACTATTTACTCCGTAAATGTTCTGTGAACTCCAAAACAAATATA 26 11827120 0.973508664 6 24 185 0.944444444 1.230448921 0 0.230769231 0.444444444 26 1 1 34 3L:11827097-11827140 6 CycA FBtr0076075|FBtr0076075|FBtr0076075|FBtr0304650|FBtr0304650|FBtr0304650 11827081|11827081|11827081|11826717|11826717|11826717 11827651|11827651|11827651|11827651|11827651|11827651 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 11827099 11827140 3'utr CycA FlyBase G27413.1 ACTATTTACTCCGTAAATGTTCTGTGAACTCCAAAACAAATA 27 11827120 0.804497104 7 26 192 0.951219512 1.591064607 0.048780488 0.37037037 0.585365854 27 2 0 39 3L:11827099-11827140 6 25.5 407 FBgn0000404 2869.163333 125.9133333 194.37 0.008887608 0.202520252 0.131193085 1 1 1 0.5 dme-miR-31a-5p 8mer-A1 TCTTGCCA 3L 11993719 11993726 - 3L_11993719_11993726_- 0.368014185 0.374173267 0.371093726 0.004355141 Grip163 FBtr0076061 11993272 11993752 3L - 11993699 11993875 stop_codon Grip163 FlyBase G36300.1 AAGGCGGCCGCTTCTGGTTACCAGGAGGAAATCGGTGACCTGATTTGTATTATTAACTTTAACCACTATTACAAGGTATCTGGGAACCATACTGGTTCCTCAATGGAGGACAAAAAGTGCTAGCCAATAATTGTTAGATAGGGAATTTATCTTGCCATTAAGCTGAGCTTAGAACAT 70 11993718 0.949236192 14 68 606 0.976190476 1.913813852 0.154761905 0.171428571 0.30952381 70 2 0 82 3L:11993699-11993875 8 Grip163 FBtr0076061 11993272 11993752 TCTTGCCA 8mer-A1 dme-miR-31a-5p 3L - 11993701 11993853 stop_codon Grip163 FlyBase G27431.1 AGGAGGAAATCGGTGACCTGATTTGTATTATTAACTTTAACCACTATTACAAGGTATCTGGGAACCATACTGGTTCCTCAATGGAGGACAAAAAGTGCTAGCCAATAATTGTTAGATAGGGAATTTATCTTGCCATTAAGCTGAGCTTAGAAC 43 11993718 0.895317004 12 42 352 0.958333333 1.236789099 0.097222222 0.441860465 0.666666667 43 0 3 69 3L:11993701-11993853 8 22 408 FBgn0026432 421 10.95666667 16.75333333 0.052256532 2.007909948 1.313171508 -8 -8 -8 0.5 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 3L 12143112 12143119 + 3L_12143112_12143119_+ 0.604773699 0.599375303 0.602074501 0.003817245 RhoGAP68F FBtr0334092|FBtr0334091|FBtr0075997|FBtr0334093 12142827|12142827|12142827|12142827 12143380|12143380|12143380|12143380 3L + 12143062 12143135 3'utr RhoGAP68F FlyBase G29720.1 CCGAAAATCACAATTATTTACCCCCAACAAGCGCTTAATACGATTGATTTACCAAAGAAATTTGCTCGTGTTCG 31 12143111 0.974028894 8 30 186 0.974358974 1.278753601 0.128205128 0.225806452 0.384615385 31 0 1 38 3L:12143062-12143135 8 RhoGAP68F FBtr0334093|FBtr0075997|FBtr0334091|FBtr0334092 12142827|12142827|12142827|12142827 12143380|12143380|12143380|12143380 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 12143083 12143131 3'utr RhoGAP68F FlyBase G22497.1 CCCCAACAAGCGCTTAATACGATTGATTTACCAAAGAAATTTGCTCGTG 22 12143111 0.979592546 4 20 133 0.903225806 1.146128036 0.258064516 0.272727273 0.483870968 22 2 1 28 3L:12143083-12143131 8 23.5 409 FBgn0036257 644.8233333 34.92 53.27666667 0.036444091 0.672966781 0.441093662 1 1 1 0.5 dme-miR-34-5p 8mer-A1 CACTGCCA 3L 12156412 12156419 + 3L_12156412_12156419_+ 0.660025397 0.645116113 0.652570755 0.010542467 Nrx-IV FBtr0075999|FBtr0075998 12156240|12156240 12156990|12156990 3L + 12156394 12156468 3'utr Nrx-IV FlyBase G29736.1 AGAAAATACTTTTCCATGCACTGCCAATTGTTTTGCGCAAGTAAATGCTAAGATTTGATTTATAATTGGTTGGCT 20 12156410 0.985961967 6 20 165 1 1.397940009 0.32 0.25 0.4 20 0 0 25 3L:12156394-12156468 8 Nrx-IV FBtr0075999|FBtr0075998 12156240|12156240 12156990|12156990 CACTGCCA 8mer-A1 dme-miR-34-5p 3L + 12156339 12156426 3'utr Nrx-IV FlyBase G22508.1 GAGAACGAAGTGAAAATCAAATAGACACGGAAAAGGCTCACCACGCATAACAGACAGAAAATACTTTTCCATGCACTGCCAATTGTTT 18 12156410 0.979549987 4 18 123 1 1.447158031 0.357142857 0.333333333 0.571428571 18 0 0 28 3L:12156339-12156426 8 16.5 410 FBgn0013997 1120.423333 27.23333333 41.64333333 0.014726577 0.605875153 0.396221884 2 2 2 0.5 dme-miR-308-3p 7mer-m1 TGTGATT 3L 12269620 12269626 + 3L_12269620_12269626_+ 0.497744784 0.476849883 0.487297333 0.014774925 CG32100 FBtr0076006 12269199 12269803 3L + 12269578 12269705 3'utr CG32100 FlyBase G29742.1 AGAGCCGGATCCAATTGTTTATGTACTTAATGCATTTGATTTTGTGATTTTAATCTTTTCGTAAGACTCGAAACTGGTACCAATTTAGCAAGTAAGCTCCAGCCAGTGTTCAATGCTCACCGTAGCCC 16 12269599 0.99013347 9 16 160 1 1.342422681 0.090909091 0.25 0.454545455 16 0 0 22 3L:12269578-12269705 7 CG32100 FBtr0076006 12269199 12269803 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 12269590 12269629 3'utr CG32100 FlyBase G22513.1 AATTGTTTATGTACTTAATGCATTTGATTTTGTGATTTTA 5 12269627 0.993685563 3 4 47 0.692307692 0.954242509 0.307692308 0.6 0.846153846 5 4 0 9 3L:12269590-12269629 7 5 411 FBgn0052100 96.87 5.46 8.436666667 0.051615567 0.915750916 0.592651126 21 -7 7 0.5 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA 3L 12270036 12270041 - 3L_12270036_12270041_- 0.774643088 0.761746603 0.768194846 0.009119203 Pbgs FBtr0076011|FBtr0076011|FBtr0333357|FBtr0333357 12269966|12269966|12269450|12269450 12270291|12270291|12270291|12270291 3L - 12270031 12270082 3'utr Pbgs FlyBase G36359.1 ATTTTACCGATTAAGTGGCTTAAATAAGACTCAAAGGCTTTTACTTACATCA 59 12270042 0.802408982 8 55 364 0.943661972 1.348953548 0.056338028 0.203389831 0.338028169 59 2 2 67 3L:12270031-12270082 6 Pbgs FBtr0076011|FBtr0076011|FBtr0333357|FBtr0333357 12269966|12269966|12269450|12269450 12270291|12270291|12270291|12270291 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" 3L - 12270029 12270082 3'utr Pbgs FlyBase G27466.1 ATTTTACCGATTAAGTGGCTTAAATAAGACTCAAAGGCTTTTACTTACATCAAT 28 12270042 0.971497265 7 27 162 0.971428571 1.230448921 0.171428571 0.142857143 0.314285714 28 0 1 34 3L:12270029-12270082 6 23.5 412 FBgn0036271 224.0566667 17.76333333 27 0.104884181 1.322949897 0.87037037 1 1 1 0.5 dme-miR-304-5p 8mer-A1 TGAGATTA 3L 12281298 12281305 + 3L_12281298_12281305_+ 0.463329146 0.584322879 0.523826012 0.085555536 CG10426 FBtr0076007|FBtr0333356 12281032|12281032 12281476|12281476 3L + 12281222 12281377 3'utr CG10426 FlyBase G29746.1 TACTTACCCTGCAATGCTGCGGTAGATCTTAGGCGCTGCCTTTCGCCTCGAGGCCTTAGTCGTAATACGTTCCTTATGAGATTATCTAATACATACTCGTGCAACAATTCTGTACCTCTACTCTGAAGCACAAGCTTAGTTCGTAGATAAACTAAA 70 12281298 0.865425051 18 69 510 0.977272727 1.934498451 0.113636364 0.214285714 0.375 70 2 0 86 3L:12281222-12281377 8 CG10426 FBtr0333356|FBtr0076007 12281032|12281032 12281476|12281476 TGAGATTA 8mer-A1 dme-miR-304-5p 3L + 12281227 12281310 3'utr CG10426 FlyBase G22515.1 ACCCTGCAATGCTGCGGTAGATCTTAGGCGCTGCCTTTCGCCTCGAGGCCTTAGTCGTAATACGTTCCTTATGAGATTATCTAA 22 12281297 0.988781921 11 20 183 0.935483871 1.462397998 0.129032258 0.318181818 0.516129032 22 2 0 29 3L:12281227-12281310 8 16.5 413 FBgn0036273 103.6666667 4.046666667 6.22 0.159163987 4.077429984 2.652733119 0 1 0.5 0.5 dme-miR-2a-2-5p 6mer3-8 TGATGA 3L 12403209 12403214 - 3L_12403209_12403214_- 0.787264294 0.808095108 0.797679701 0.0147296 CG32103 FBtr0332090 12402293 12404054 3L - 12403051 12403451 3'utr CG32103 FlyBase G36377.1 AGTTCGTCCCATCCGACTGCTTTCGAAAGCGAATTAGCTTAGCATAAATCAGAGTGAGCCAGGCAGGCGGATTGCGAGTGGGAATCAGGTATCTGAAATCGAGGGATAGACGGATGGATACGGATACTCGGCAGCGTTTAAGCTTAAACACAAAAGACATTAAAACTACGATGTACTCGTTTTTGCTTAGATTAATCGATTACACAAAAAAATGAGAAACACTTAACGTTTACAATGTGATGATAATAGTTTATAATATACACATATAAATACATATAACTATACCTATACCTACTAAAATACCGACTTGTAAGCTTCAAATAGCTGTCGCAGTCTCTTGAGCAAGTTCGGCGGCGAGGCTGAAGAAAACTTTGTAGCATTTTATTTGTTAAGTTTAGTAA 255 12403221 0.887726428 61 235 1896 0.920792079 1.600506163 0.191419142 0.164705882 0.297029703 255 18 6 279 3L:12403051-12403451 6 CG32103 FBtr0332090 12402293 12404054 TGATGA 6mer3-8 dme-miR-2a-2-5p 3L - 12403062 12403240 3'utr CG32103 FlyBase G27481.1 ATGAGAAACACTTAACGTTTACAATGTGATGATAATAGTTTATAATATACACATATAAATACATATAACTATACCTATACCTACTAAAATACCGACTTGTAAGCTTCAAATAGCTGTCGCAGTCTCTTGAGCAAGTTCGGCGGCGAGGCTGAAGAAAACTTTGTAGCATTTTATTTGTT 145 12403208 0.987390968 33 134 1198 0.942477876 1.851258349 0.172566372 0.413793103 0.623893805 145 11 2 213 3L:12403062-12403240 6 102 414 FBgn0052103 1942.393333 66.43 101.62 0.052512536 1.535450851 1.003739421 7 -6 0.5 0.5 dme-miR-1008-3p 6mer2-7 GCTGTG 3L 12403920 12403925 - 3L_12403920_12403925_- 0.570266511 0.530337994 0.550302252 0.028233713 CG32103 FBtr0075982|FBtr0332090|FBtr0075983|FBtr0332089 12403503|12402293|12403503|12403503 12404054|12404054|12404054|12404054 3L - 12403828 12403946 3'utr CG32103 FlyBase G36380.2 GCGGCTGGTGATCCGGCTGACGCTGTGCTCCATTTTGTATAGTAGTAGCGTTAGGTTAAGTCGGCTCGGTGGTCGCCACTCGCTCTCTGCCGCAATGAGACAGTCTCGTGCTGCTTCTT 70 12403923 0.898326283 26 67 440 0.963414634 1.897627091 0.170731707 0.142857143 0.268292683 70 3 0 79 3L:12403828-12403946 6 CG32103 FBtr0332089|FBtr0075983|FBtr0332090|FBtr0075982 12403503|12403503|12402293|12403503 12404054|12404054|12404054|12404054 GCTGTG 6mer2-7 dme-miR-1008-3p 3L - 12403783 12403948 3'utr CG32103 FlyBase G27485.1 GTGCGGCTGGTGATCCGGCTGACGCTGTGCTCCATTTTGTATAGTAGTAGCGTTAGGTTAAGTCGGCTCGGTGGTCGCCACTCGCTCTCTGCCGCAATGAGACAGTCTCGTGCTGCTTCTTTCCTTAAGTGTAAAGCAGGCCTCTTCCACGTTCTGGGTTATCCGT 100 12403923 0.885428329 29 92 636 0.909722222 1.640150041 0.201388889 0.32 0.527777778 100 11 2 131 3L:12403783-12403948 6 25.5 415 FBgn0052103 1942.393333 66.43 101.62 0.013128134 0.383862713 0.250934855 -2 -2 -2 0.5 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 1250109 1250115 + 3L_1250109_1250115_+ 0.742276614 0.731134135 0.736705375 0.007878937 Sac1 FBtr0303217|FBtr0072652 1250068|1250068 1250451|1250451 3L + 1250076 1250142 3'utr Sac1 FlyBase G26994.1 TGTCGTCTAGCAGAGTCACTGGGAACTACCTCTGCAGCTAAACTGTCCCATTGCTCCGAGAAAGAAC 16 1250108 0.963364916 5 15 80 0.941176471 1.204119983 0.294117647 0.0625 0.117647059 16 1 0 16 3L:1250076-1250142 7 Sac1 FBtr0303217|FBtr0072652 1250068|1250068 1250451|1250451 GCAGCTA 7mer-A1 dme-miR-980-3p 3L + 1250077 1250153 3'utr Sac1 FlyBase G20435.1 GTCGTCTAGCAGAGTCACTGGGAACTACCTCTGCAGCTAAACTGTCCCATTGCTCCGAGAAAGAACAATTGTAAACC 13 1250107 0.969472889 6 12 71 0.944444444 1.230448921 0.166666667 0.307692308 0.5 13 1 0 17 3L:1250077-1250153 7 12 416 FBgn0035195 492.1933333 25.24666667 38.54333333 0.024380663 0.475310272 0.311337888 1 2 1.5 0.5 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 12505632 12505637 + 3L_12505632_12505637_+ 0.782353507 0.78885304 0.785603273 0.004595841 vih FBtr0075958 12505147 12505821 3L + 12505604 12505650 3'utr vih FlyBase G29770.1 AAGCGACTATGCTGCTGCGCCGGCCATTATGTGAATGTTAGCTAATT 25 12505631 0.691748466 7 25 173 1 1.491361694 0.193548387 0.2 0.35483871 25 0 0 31 3L:12505604-12505650 6 vih FBtr0075958 12505147 12505821 ATGTGA 6mer3-8 dme-miR-1003-3p 3L + 12505594 12505648 3'utr vih FlyBase G22537.1 GATGATTTTTAAGCGACTATGCTGCTGCGCCGGCCATTATGTGAATGTTAGCTAA 18 12505639 0.627681633 7 17 120 0.96969697 1.505149978 0 0.444444444 0.696969697 18 1 0 32 3L:12505594-12505648 6 17.5 417 FBgn0264848 630.4033333 52.49 79.89666667 0.027760005 0.333396837 0.219032918 1 -7 -3 0.5 dme-miR-932-5p 7mer-A1 GAATTGA 3L 12519225 12519231 + 3L_12519225_12519231_+ 0.725014906 0.730626253 0.727820579 0.003967859 tral FBtr0332635|FBtr0332642|FBtr0332636|FBtr0332641|FBtr0332638|FBtr0332639|FBtr0332637|FBtr0332640|FBtr0075959 12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150 12520954|12519695|12519695|12519695|12519695|12519695|12520954|12519695|12519695 3L + 12519186 12519246 3'utr tral FlyBase G29788.1 ACACCAACCACAACCAACAAACCACAAATTGATAGATGCGAATTGAGAAGAGCGTAAAGTA 10 12519228 0.943966455 5 9 37 1 1.041392685 0.363636364 0.222222222 0.363636364 9 0 0 11 3L:12519186-12519246 7 tral FBtr0332639|FBtr0332637|FBtr0332640|FBtr0075959|FBtr0332635|FBtr0332636|FBtr0332642|FBtr0332641|FBtr0332638 12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150|12519150 12519695|12520954|12519695|12519695|12520954|12519695|12519695|12519695|12519695 GAATTGA 7mer-A1 dme-miR-932-5p 3L + 12519151 12519245 3'utr tral FlyBase G22544.1 GTGCCGCCCGGCCAGTGGAAAGCCACTTTAAATATACACCAACCACAACCAACAAACCACAAATTGATAGATGCGAATTGAGAAGAGCGTAAAGT 8 12519228 0.937618104 7 7 31 1 1.113943352 0.384615385 0.5 0.692307692 8 0 0 13 3L:12519151-12519245 7 6 418 FBgn0041775 2554.613333 85.08333333 130.6233333 0.002348692 0.070519099 0.0459336 -3 -3 -3 0.5 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 12519998 12520005 + 3L_12519998_12520005_+ 0.645020861 0.651740263 0.648380562 0.004751333 tral FBtr0332635|FBtr0332637 12519150|12519150 12520954|12520954 3L + 12519982 12520021 3'utr tral FlyBase G29795.1 AAAAGAAAATAAAATCGGCAGCTACGCGCTTCTATCAAAA 104 12519996 0.895315589 5 91 412 0.872 1.560305243 0.072 0.153846154 0.296 104 14 2 109 3L:12519982-12520021 8 tral FBtr0332637|FBtr0332635 12519150|12519150 12520954|12520954 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L + 12519981 12520026 3'utr tral FlyBase G22550.1 AAAAAGAAAATAAAATCGGCAGCTACGCGCTTCTATCAAAAGCACA 67 12519996 0.857844646 5 63 246 0.978947368 1.968482949 0.178947368 0.313432836 0.515789474 67 2 0 93 3L:12519981-12520026 8 84.5 419 FBgn0041775 2554.613333 85.08333333 130.6233333 0.033077413 0.993143976 0.646898206 2 2 2 0.5 dme-bantam-3p 7mer-m8 TGATCTC 3L 12520197 12520203 + 3L_12520197_12520203_+ 0.462855089 0.61431392 0.538584504 0.107097545 tral FBtr0332635|FBtr0332637 12519150|12519150 12520954|12520954 3L + 12520159 12520222 3'utr tral FlyBase G29796.1 AAGCCCAAATTTTCGGTTTTCGTACAGTTTATTTTCTCTGATCTCGGTTGGGCAAGGGAAATTA 88 12520197 0.99033327 8 82 827 0.922330097 1.67669361 0.27184466 0.125 0.252427184 88 7 1 95 3L:12520159-12520222 7 tral FBtr0332637|FBtr0332635 12519150|12519150 12520954|12520954 TGATCTC 7mer-m8 dme-bantam-3p 3L + 12520172 12520231 3'utr tral FlyBase G22551.1 CGGTTTTCGTACAGTTTATTTTCTCTGATCTCGGTTGGGCAAGGGAAATTATACTTACGA 50 12520197 0.978167442 8 46 513 0.898734177 1.550228353 0.443037975 0.42 0.632911392 50 7 1 71 3L:12520172-12520231 7 68 420 FBgn0041775 2554.613333 85.08333333 130.6233333 0.02661851 0.799216454 0.520580805 0 0 0 0.5 dme-miR-2a-2-5p 6mer3-8 TGATGA 3L 12520266 12520271 + 3L_12520266_12520271_+ 0.502541938 0.554055822 0.52829888 0.036425828 tral FBtr0332635|FBtr0332637 12519150|12519150 12520954|12520954 3L + 12520243 12520329 3'utr tral FlyBase G29797.1 TTGAAAAGATACGATACCTATGGTGATGATGTTCTCAATGTAAATGTTAAGATTGATTGTGTGATTCACTGGCTGCTGCGCTTGAAA 41 12520271 0.737726945 12 36 333 0.894736842 1.707570176 0.333333333 0.341463415 0.526315789 41 6 0 51 3L:12520243-12520329 6 tral FBtr0332637|FBtr0332635 12519150|12519150 12520954|12520954 TGATGA 6mer3-8 dme-miR-2a-2-5p 3L + 12520247 12520327 3'utr tral FlyBase G22552.1 AAAGATACGATACCTATGGTGATGATGTTCTCAATGTAAATGTTAAGATTGATTGTGTGATTCACTGGCTGCTGCGCTTGA 45 12520270 0.721657385 13 40 387 0.87654321 1.152288344 0.37037037 0.444444444 0.691358025 45 6 4 71 3L:12520247-12520327 6 30 421 FBgn0041775 2554.613333 85.08333333 130.6233333 0.01174346 0.352595495 0.229668002 -5 -4 -4.5 0.5 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 12527471 12527477 - 3L_12527471_12527477_- 0.505715922 0.474845874 0.490280898 0.021828386 nst FBtr0075967 12527213 12527630 3L - 12527448 12527501 3'utr nst FlyBase G36463.1 ATTCTGCAAATGTTCACTGTCTTTTGTGTTCTAAAGATGACATATTTTTTGCCA 25 12527478 0.659621256 8 25 263 1 1.431363764 0.074074074 0.08 0.148148148 25 0 0 27 3L:12527448-12527501 7 nst FBtr0075967 12527213 12527630 TGTGTTC 7mer-m8 dme-miR-317-3p 3L - 12527434 12527632 stop_codon nst FlyBase G27549.1 AGAGCGGAATGACGAACTAACCTCTCACGGGAATCGACAATTGACACAGATCCTGGATGGAGCAATAAATCTCTTTACTCTAAGGTGCTCAATAACTTAAAAAAAAAACAACTTAACTCTCAAACGCATTTATTCTGCAAATGTTCACTGTCTTTTGTGTTCTAAAGATGACATATTTTTTGCCATTATTTATAAAGTT 42 12527478 0.985356046 20 39 326 0.967213115 1.770852012 0.196721311 0.30952381 0.524590164 42 2 0 59 3L:12527434-12527632 7 19 422 FBgn0036298 243.65 13.55666667 20.85333333 0.07798071 1.401524465 0.91112532 1 1 1 0.5 dme-miR-305-3p 6mer3-8 ATGTGC 3L 12746555 12746560 + 3L_12746555_12746560_+ 0.999342678 0.892774775 0.946058727 0.075354885 CG32109 FBtr0075918 12746477 12746770 3L + 12746525 12746582 3'utr CG32109 FlyBase G29838.1 AATAATAAATGTTAAGCTGATTCCACTGTAATGTGCTATATCTGGTCCGTATTTTTGG 24 12746557 0.997597545 8 11 234 0.53125 0.929418926 0.09375 0.25 0.4375 24 14 1 17 3L:12746525-12746582 6 CG32109 FBtr0075918 12746477 12746770 ATGTGC 6mer3-8 dme-miR-305-3p 3L + 12746534 12746574 3'utr CG32109 FlyBase G22580.1 TGTTAAGCTGATTCCACTGTAATGTGCTATATCTGGTCCGT 14 12746556 0.998342382 5 6 133 0.3 0.954242509 0 0.714285714 0.866666667 14 21 0 9 3L:12746534-12746574 6 16.5 423 FBgn0052109 192.0866667 22.89 35.27333333 0.085898726 0.720838794 0.467775468 -2 -1 -1.5 0.5 dme-miR-304-5p 8mer-A1 TGAGATTA 3L 12824572 12824579 + 3L_12824572_12824579_+ 0.594394374 0.608809021 0.601601698 0.010192661 CG42588 FBtr0304053|FBtr0301717 12824517|12824517 12824650|12824650 3L + 12824528 12824588 3'utr CG42588 FlyBase G29883.1 TGGAAACACACTGGTAACAGAAAATCTTCTGAACAAGCACCATCTGAGATTATAACTTATT 14 12824570 0.976945955 5 12 75 0.894736842 1.230448921 0 0.214285714 0.421052632 14 2 0 17 3L:12824528-12824588 8 CG42588 FBtr0301717|FBtr0304053 12824517|12824517 12824650|12824650 TGAGATTA 8mer-A1 dme-miR-304-5p 3L + 12824537 12824590 3'utr CG42588 FlyBase G22612.1 ACTGGTAACAGAAAATCTTCTGAACAAGCACCATCTGAGATTATAACTTATTGT 13 12824571 0.9810472 6 12 77 0.941176471 1.204119983 0 0.230769231 0.411764706 13 1 0 16 3L:12824537-12824590 8 10.5 424 FBgn0260965 649.5 9.203333333 14.18 0.016166282 1.140890982 0.740479549 2 1 1.5 0.5 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 12894546 12894553 + 3L_12894546_12894553_+ 0.514826392 0.55977829 0.537302341 0.031785793 CG14118 FBtr0075870 12894495 12894758 3L + 12894528 12894564 3'utr CG14118 FlyBase G29896.1 TTTTAAGTGAGTGCAATAAAGACTGAGTGAGTTGTGT 18 12894544 0.872400093 3 17 87 0.947368421 1.255272505 0.736842105 0.055555556 0.105263158 18 1 0 18 3L:12894528-12894564 8 CG14118 FBtr0075870 12894495 12894758 AAGACTGA 8mer-A1 dme-miR-14-3p 3L + 12894529 12894566 3'utr CG14118 FlyBase G22619.1 TTTAAGTGAGTGCAATAAAGACTGAGTGAGTTGTGTGA 14 12894544 0.879132243 2 14 71 1 1.278753601 0.631578947 0.285714286 0.473684211 14 0 0 19 3L:12894529-12894566 8 16 425 FBgn0036323 1 0.083333333 0.13 16 192 123.0769231 2 2 2 0.5 dme-miR-14-3p 7mer-A1 AGACTGA 3L 13009226 13009232 + 3L_13009226_13009232_+ 0.777337589 0.772286422 0.774812006 0.003571738 CG14117 FBtr0306091|FBtr0332074 13009186|13008969 13009450|13009450 3L + 13009209 13009249 3'utr CG14117 FlyBase G29898.1 AATAACCCCAGATTTCGAGACTGATGGCTCAGAACGGATAT 36 13009223 0.616156631 5 36 185 1 1.591064607 0.102564103 0.055555556 0.128205128 36 0 0 39 3L:13009209-13009249 7 CG14117 FBtr0332074|FBtr0306091 13008969|13009186 13009450|13009450 AGACTGA 7mer-A1 dme-miR-14-3p 3L + 13009209 13009290 3'utr CG14117 FlyBase G22622.1 AATAACCCCAGATTTCGAGACTGATGGCTCAGAACGGATATGCGTCAAATTAAACGAGGATGTAGCCTTTAGCTATTTAGTT 38 13009233 0.905760003 8 38 207 1 1.77815125 0.183333333 0.342105263 0.583333333 38 0 0 60 3L:13009209-13009290 7 32 426 FBgn0036331 82 9.843333333 15.15333333 0.390243902 3.250931256 2.11174659 3 -7 -2 0.5 dme-miR-999-3p 7mer-A1 GTTAACA 3L 13020168 13020174 - 3L_13020168_13020174_- 0.559963757 0.546960826 0.553462292 0.009194509 AdenoK FBtr0075895|FBtr0075896|FBtr0346531 13019980|13019980|13019713 13020289|13020289|13020289 3L - 13020160 13020202 3'utr AdenoK FlyBase G36606.1 AAGTAAATGAGAGTGACTAAAAGATTTTGTTAACACTGATAAT 27 13020175 0.662619382 6 26 215 0.971428571 1.531478917 0.257142857 0.222222222 0.4 27 1 0 34 3L:13020160-13020202 7 AdenoK FBtr0075896|FBtr0346531|FBtr0075895 13019980|13019713|13019980 13020289|13020289|13020289 GTTAACA 7mer-A1 dme-miR-999-3p 3L - 13020164 13020231 3'utr AdenoK FlyBase G27640.1 AAGCGCAGCAAGATTTGCAATTGTTAATTAAGTAAATGAGAGTGACTAAAAGATTTTGTTAACACTGA 19 13020175 0.983059798 6 18 153 0.941176471 1.505149978 0.117647059 0.631578947 0.794117647 19 2 0 32 3L:13020164-13020231 7 20 427 FBgn0036337 473.9933333 36.92 56.63666667 0.042194686 0.541711809 0.353128127 1 1 1 0.5 dme-bantam-3p 6mer2-7 GATCTC 3L 1333330 1333335 - 3L_1333330_1333335_- 0.849758035 0.821905689 0.835831862 0.01969455 CG2211 FBtr0331866|FBtr0072723 1333237|1333237 1333416|1333416 3L - 1333287 1333388 3'utr CG2211 FlyBase G33271.1 ATTCAAACAGCCATGTTAGTCCAAACTTTCATATGGTATAAACTCCCTATTAAGATCTCGTTAAAACCACTGAAGACTTGAAATACGTGTAGTGCACTCTAA 77 1333328 0.968417021 14 69 557 0.902173913 1.220108088 0.141304348 0.155844156 0.293478261 77 5 4 83 3L:1333287-1333388 6 CG2211 FBtr0331866|FBtr0072723 1333237|1333237 1333416|1333416 GATCTC 6mer2-7 dme-bantam-3p 3L - 1333294 1333365 3'utr CG2211 FlyBase G25174.2 AACTTTCATATGGTATAAACTCCCTATTAAGATCTCGTTAAAACCACTGAAGACTTGAAATACGTGTAGTGC 62 1333328 0.924516305 11 62 379 1 1.954242509 0.055555556 0.322580645 0.533333333 62 0 0 90 3L:1333294-1333365 6 53 428 FBgn0035211 37.72 2.756666667 4.2 1.405090138 19.2261185 12.61904762 -7 -7 -7 0.5 dme-miR-34-5p 7mer-A1 ACTGCCA 3L 13515854 13515860 + 3L_13515854_13515860_+ 0.691216102 0.540726153 0.615971128 0.106412429 Liprin-beta FBtr0075813|FBtr0330342|FBtr0075814 13515759|13515759|13515759 13516276|13516276|13516276 3L + 13515770 13515875 3'utr Liprin-beta FlyBase G30022.1 CGAAAGGAGCACAAATCGATTGAAAGCAAATATGTTTTTTAGTTGTAAGCCCAAAACCTGGCCAAGGATCCCCAAACTGAATGAACTGCCACCTGAACCAATTATG 59 13515851 0.973035859 16 53 319 0.918918919 1.832508913 0.324324324 0.186440678 0.351351351 59 6 0 68 3L:13515770-13515875 7 Liprin-beta FBtr0330342|FBtr0075814|FBtr0075813 13515759|13515759|13515759 13516276|13516276|13516276 ACTGCCA 7mer-A1 dme-miR-34-5p 3L + 13515771 13515868 3'utr Liprin-beta FlyBase G22720.1 GAAAGGAGCACAAATCGATTGAAAGCAAATATGTTTTTTAGTTGTAAGCCCAAAACCTGGCCAAGGATCCCCAAACTGAATGAACTGCCACCTGAACC 43 13515851 0.975870382 9 38 237 0.892307692 1.763427994 0.307692308 0.325581395 0.553846154 43 7 0 58 3L:13515771-13515868 7 27.5 429 FBgn0036376 801.8733333 34.78666667 53.21666667 0.034294693 0.790532771 0.516755402 3 3 3 0.5 dme-miR-11-3p 8mer-m1 CTGTGATG 3L 13934344 13934351 + 3L_13934344_13934351_+ 0.458185239 0.458586462 0.458385851 0.000283762 Gl FBtr0075756 13934192 13934656 3L + 13934314 13934361 3'utr Gl FlyBase G30055.1 AATAACACAGCTCCTCAAGACTCCCTGCTCCTGTGATGTGACCTAAAC 102 13934341 0.696635919 10 99 772 0.956521739 1.740362689 0.113043478 0.117647059 0.217391304 102 4 1 110 3L:13934314-13934361 8 Gl FBtr0075756 13934192 13934656 CTGTGATG 8mer-m1 dme-miR-11-3p 3L + 13934316 13934361 3'utr Gl FlyBase G22738.1 TAACACAGCTCCTCAAGACTCCCTGCTCCTGTGATGTGACCTAAAC 51 13934342 0.670338775 6 46 368 0.921052632 1.367976785 0.118421053 0.352941176 0.565789474 51 4 2 70 3L:13934316-13934361 8 75 430 FBgn0001108 959.94 25.44 38.93 0.078129883 2.948113208 1.926534806 3 2 2.5 0.5 dme-miR-965-3p 7mer-m8 TACGCTT 3L 13999609 13999615 - 3L_13999609_13999615_- 0.453274041 0.450128658 0.45170135 0.002224063 CG8783 FBtr0333025|FBtr0075786|FBtr0075785 13999378|13999378|13999378 13999734|13999734|13999734 3L - 13999592 13999638 3'utr CG8783 FlyBase G36691.1 AAAGTTTGCGAAGCAAATCAATTTACGCTTGTAGACTACATATTTTG 142 13999616 0.758056456 6 142 1141 1 2.201397124 0.213836478 0.105633803 0.201257862 142 0 0 159 3L:13999592-13999638 7 CG8783 FBtr0075786|FBtr0075785|FBtr0333025 13999378|13999378|13999378 13999734|13999734|13999734 TACGCTT 7mer-m8 dme-miR-965-3p 3L - 13999595 13999639 3'utr CG8783 FlyBase G27698.1 TAAAGTTTGCGAAGCAAATCAATTTACGCTTGTAGACTACATATT 82 13999616 0.75354898 5 81 636 0.992248062 2.10720997 0.317829457 0.390243902 0.612403101 82 1 0 128 3L:13999595-13999639 7 112 431 FBgn0036397 101 5.286666667 8.043333333 1.108910891 21.18537201 13.92457522 1 1 1 0.5 dme-miR-970-3p 8mer-A1 TCTTATGA 3L 14021058 14021065 - 3L_14021058_14021065_- 0.587894864 0.600282684 0.594088774 0.008759497 ptip FBtr0075784 14020313 14021220 3L - 14020930 14021106 3'utr ptip FlyBase G36703.1 CGCAATGTCATTGGCCATTGATGTTGTAGGCCGCGCCAATTTCTTATGATATACCAACGCGAAACTAGTCCATAGAGTTCGTCAATTCAATCGGGCATGCCGGAACGAATGAGTTTATAGGGTCTCGGGCACATCGGCATATCGGTCACAGCTAGACAAATTTATTGCATCCCCCTA 82 14021066 0.981844784 15 79 588 0.956521739 1.944482672 0.358695652 0.109756098 0.206521739 82 4 0 88 3L:14020930-14021106 8 ptip FBtr0075784 14020313 14021220 TCTTATGA 8mer-A1 dme-miR-970-3p 3L - 14020997 14021088 3'utr ptip FlyBase G27705.1 TGATGTTGTAGGCCGCGCCAATTTCTTATGATATACCAACGCGAAACTAGTCCATAGAGTTCGTCAATTCAATCGGGCATGCCGGAACGAAT 32 14021066 0.999759654 7 31 195 0.955555556 1.633468456 0.177777778 0.28125 0.488888889 32 2 0 43 3L:14020997-14021088 8 40 432 FBgn0052133 645.9666667 9.623333333 14.77 0.0619227 4.156563907 2.708192282 1 1 1 0.5 dme-bantam-3p 7mer-A1 GATCTCA 3L 14052405 14052411 + 3L_14052405_14052411_+ 0.547148091 0.530488384 0.538818237 0.011780187 CG6833 FBtr0302433|FBtr0075774 14052207|14052207 14052469|14052469 3L + 14052392 14052422 3'utr CG6833 FlyBase G30205.1 AAAAGCAGGCTCGGATCTCATGATGAAACCA 17 14052412 0.680372651 3 15 65 0.954545455 1.322219295 0.181818182 0.235294118 0.409090909 17 1 0 21 3L:14052392-14052422 7 CG6833 FBtr0302433|FBtr0075774 14052207|14052207 14052469|14052469 GATCTCA 7mer-A1 dme-bantam-3p 3L + 14052393 14052420 3'utr CG6833 FlyBase G22843.1 AAAGCAGGCTCGGATCTCATGATGAAAC 19 14052412 0.65185109 2 19 71 1 1.397940009 0.32 0.315789474 0.48 19 0 0 25 3L:14052393-14052420 7 18 433 FBgn0036405 208.48 21.87 33.59 0.086339217 0.823045267 0.535873772 -7 -7 -7 0.5 dme-miR-305-3p 8mer-A1 ATGTGCCA 3L 14541904 14541911 - 3L_14541904_14541911_- 0.587801464 0.510698249 0.549249856 0.054520266 Gbs-70E FBtr0333037|FBtr0075724|FBtr0075723 14540935|14541044|14541535 14542118|14542118|14542118 3L - 14541882 14541950 3'utr Gbs-70E FlyBase G36757.1 TGACCTAAGCTAATACCCGGTACAAATATCCCAATTTTAATGTGCCATTGACTTGAGGTTTACTCAATA 15 14541901 0.896376721 4 12 108 0.833333333 0.875061263 0 0.2 0.333333333 15 2 1 15 3L:14541882-14541950 8 Gbs-70E FBtr0075723|FBtr0075724|FBtr0333037 14541535|14541044|14540935 14542118|14542118|14542118 ATGTGCCA 8mer-A1 dme-miR-305-3p 3L - 14541861 14541913 3'utr Gbs-70E FlyBase G27748.1 TAATGTGCCATTGACTTGAGGTTTACTCAATATAAAATGAGATAGGAGGGCTT 12 14541896 0.985621338 8 11 82 0.894736842 1.230448921 0 0.5 0.684210526 12 2 0 17 3L:14541861-14541913 8 9 434 FBgn0036428 388.9433333 16.83333333 25.64666667 0.023139618 0.534653465 0.350922797 -10 -15 -12.5 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 1467677 1467683 + 3L_1467677_1467683_+ 0.442223645 0.455810896 0.449017271 0.009607672 rho FBtr0333207|FBtr0333207|FBtr0333207|FBtr0072694|FBtr0072694|FBtr0072694 1467352|1467352|1467352|1467352|1467352|1467352 1468944|1468944|1468944|1468475|1468475|1468475 3L + 1467651 1467702 3'utr rho FlyBase G27090.1 CGAAGCCGAAACGTGTAAACAAATGTTGTGATAGAACCAAAGACTGAATTTA 65 1467675 0.842953324 5 60 354 0.936708861 1.568201724 0 0.2 0.341772152 65 4 1 74 3L:1467651-1467702 7 rho FBtr0333207|FBtr0333207|FBtr0333207|FBtr0072694|FBtr0072694|FBtr0072694 1467352|1467352|1467352|1467352|1467352|1467352 1468944|1468944|1468944|1468475|1468475|1468475 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 1467657 1467703 3'utr rho FlyBase G20508.1 CGAAACGTGTAAACAAATGTTGTGATAGAACCAAAGACTGAATTTAT 60 1467674 0.829437338 7 56 327 0.94047619 1.897627091 0.023809524 0.3 0.5 60 5 0 79 3L:1467657-1467703 7 62.5 435 FBgn0004635 880.87 41.8 65 0.070952581 1.495215311 0.961538462 2 3 2.5 0.5 dme-miR-317-3p 8mer-A1 TGTGTTCA 3L 14752740 14752747 - 3L_14752740_14752747_- 0.630762222 0.630805809 0.630784015 3.08E-05 Trl FBtr0075707|FBtr0075706 14747927|14750240 14752905|14752905 3L - 14752726 14752795 5'utr Trl FlyBase G36795.1 ATAACAATCAGCAAACAAACAAATTCCCCGTGATCTGATCGAATGATTTGTGTTCATTTCCTGTATCATT 294 14752748 0.637609015 11 286 2205 0.971590909 2.534026106 0.09375 0.173469388 0.309659091 294 10 0 342 3L:14752726-14752795 8 Trl FBtr0075706|FBtr0075707 14750240|14747927 14752905|14752905 TGTGTTCA 8mer-A1 dme-miR-317-3p 3L - 14752723 14752828 5'utr Trl FlyBase G27776.1 AAAAAACATAACACTCACAAAAACGATTTGTAAATAACAATCAGCAAACAAACAAATTCCCCGTGATCTGATCGAATGATTTGTGTTCATTTCCTGTATCATTTTT 243 14752748 0.98289456 13 237 1790 0.975903614 2.209515015 0.135542169 0.308641975 0.493975904 243 7 1 324 3L:14752723-14752828 8 103.5 436 FBgn0013263 1897.606667 85.71333333 130.6566667 0.054542388 1.207513417 0.792152461 1 1 1 0.5 dme-miR-308-3p 8mer-m1 CTGTGATT 3L 14766856 14766863 + 3L_14766856_14766863_+ 0.376809806 0.35433291 0.365571358 0.015893568 CG9384 FBtr0333044|FBtr0075690 14765702|14765702 14767703|14767703 3L + 14766816 14766875 3'utr CG9384 FlyBase G30302.2 ATTAAATAACGAAACGATTTTTAGCATTGTTGCTTTTTTACTGTGATTTGTTAATAATTT 49 14766863 0.696481717 10 47 614 0.966101695 1.755874856 0.152542373 0.163265306 0.305084746 49 2 0 57 3L:14766816-14766875 8 CG9384 FBtr0333044|FBtr0075690 14765702|14765702 14767703|14767703 CTGTGATT 8mer-m1 dme-miR-308-3p 3L + 14766830 14766874 3'utr CG9384 FlyBase G22920.1 CGATTTTTAGCATTGTTGCTTTTTTACTGTGATTTGTTAATAATT 37 14766863 0.715685298 10 37 474 1 1.681241237 0.104166667 0.216216216 0.395833333 37 0 0 48 3L:14766830-14766874 8 39 437 FBgn0036446 489.33 13.20333333 20.20333333 0.079700815 2.953799546 1.930374526 -7 -7 -7 0.5 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 14800347 14800352 + 3L_14800347_14800352_+ 0.901742121 0.956492585 0.929117353 0.03871445 CG9425 FBtr0075693 14799234 14801089 3L + 14800322 14800387 3'utr CG9425 FlyBase G30348.1 ATTTAAATTTGTGCACGAGTTATTTGTTCCTTTGCCCATCCGAAATTGTCGATGCATGTGTAAATT 15 14800346 0.771435887 9 15 148 1 1.255272505 0.222222222 0.2 0.333333333 15 0 0 18 3L:14800322-14800387 6 CG9425 FBtr0075693 14799234 14801089 GTTCCT 6mer2-7 dme-miR-276a-3p 3L + 14800300 14800379 3'utr CG9425 FlyBase G22943.1 TATATATAATATGCATATAAATATTTAAATTTGTGCACGAGTTATTTGTTCCTTTGCCCATCCGAAATTGTCGATGCATG 11 14800346 0.989355944 7 11 108 1 1.176091259 0.266666667 0.272727273 0.466666667 11 0 0 15 3L:14800300-14800379 6 8 438 FBgn0036451 1200.986667 17.94333333 27.59666667 0.00666119 0.44584804 0.289890083 1 1 1 0.5 dme-miR-14-3p 6mer3-8 AAGACT 3L 15090878 15090883 - 3L_15090878_15090883_- 0.971023657 0.75406816 0.862545908 0.153410705 CG6945 FBtr0075657 15090821 15091353 3L - 15090868 15090924 5'utr CG6945 FlyBase G36900.1 AATATACCGATTGGATACTGATATATTCACCGAGTTTTCTTAAGACTAACTACCGAC 18 15090885 0.691128991 9 16 133 0.904761905 1.278753601 0.380952381 0.166666667 0.285714286 18 2 0 19 3L:15090868-15090924 6 CG6945 FBtr0075657 15090821 15091353 AAGACT 6mer3-8 dme-miR-14-3p 3L - 15090857 15090926 5'utr CG6945 FlyBase G27861.1 TGAATATACCGATTGGATACTGATATATTCACCGAGTTTTCTTAAGACTAACTACCGACAAGCAATAACA 7 15090885 0.979085478 6 7 53 1 1 0.3 0.142857143 0.4 7 0 0 10 3L:15090857-15090926 6 7 439 FBgn0036476 404.2866667 17.14 26.23666667 0.017314447 0.4084014 0.266802185 2 2 2 0.5 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 15154579 15154586 - 3L_15154579_15154586_- 0.444944357 0.372045803 0.40849508 0.051547094 Msh6 FBtr0075646 15154231 15154664 3L - 15154444 15154614 3'utr Msh6 FlyBase G36934.1 AAACATGTTTACTTATGATTCGCCAAGAGGCAGCTATGCTGGAATTTGATGTATACGAAGCTTTTTAAGACTTTTTCACCATTTCAGTATGCATTTTTTTTGTAGTTTTTATAAGGAATTTGAATCAAAACCTGTGCCATTCTCAACATTCTCAATTAAGCAAAATGGAAC 117 15154578 0.980341138 26 103 853 0.881118881 2.100370545 0.083916084 0.205128205 0.34965035 117 17 0 126 3L:15154444-15154614 8 Msh6 FBtr0075646 15154231 15154664 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L - 15154467 15154610 3'utr Msh6 FlyBase G27890.1 ATGTTTACTTATGATTCGCCAAGAGGCAGCTATGCTGGAATTTGATGTATACGAAGCTTTTTAAGACTTTTTCACCATTTCAGTATGCATTTTTTTTGTAGTTTTTATAAGGAATTTGAATCAAAACCTGTGCCATTCTCAACA 90 15154596 0.887134801 20 86 592 0.944444444 2.075546961 0.126984127 0.3 0.5 90 7 0 119 3L:15154467-15154610 8 52.5 440 FBgn0036486 1407.773333 41.68666667 63.93666667 0.037292935 1.25939549 0.821125072 -8 10 1 0.5 dme-miR-283-5p 8mer-m1 TGATATTT 3L 15242345 15242352 + 3L_15242345_15242352_+ 0.49195794 0.476810123 0.484384031 0.010711112 Tollo FBtr0075607 15240160 15242832 3L + 15242323 15242370 3'utr Tollo FlyBase G30438.1 ACGTTTATTTGTTTAATCATTGTGATATTTTGTTTTATCAATAAGTCC 63 15242342 0.69995681 13 57 841 0.923076923 1.158362492 0.243589744 0.174603175 0.333333333 63 2 4 72 3L:15242323-15242370 8 Tollo FBtr0075607 15240160 15242832 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 15242323 15242362 3'utr Tollo FlyBase G23015.1 ACGTTTATTTGTTTAATCATTGTGATATTTTGTTTTATCA 39 15242341 0.708563098 8 37 484 0.921875 1.770852012 0.140625 0.41025641 0.640625 39 5 0 59 3L:15242323-15242362 8 51 441 FBgn0029114 1018.113333 17.04 26.18666667 0.050092655 2.992957746 1.947556008 3 4 3.5 0.5 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 3L 1544622 1544629 + 3L_1544622_1544629_+ 0.612922642 0.62800548 0.620464061 0.010665221 CG7852 FBtr0072736|FBtr0072737|FBtr0072735 1544074|1541507|1544074 1544823|1544823|1544823 3L + 1544600 1544641 3'utr CG7852 FlyBase G27133.1 AGCTTTTAGTTTAGTTGATTTTACCAAAGAATCTTTGTTTTT 20 1544621 0.838294311 4 19 209 0.954545455 1.021189299 0 0.1 0.181818182 20 0 1 21 3L:1544600-1544641 8 CG7852 FBtr0072737|FBtr0072735|FBtr0072736 1541507|1544074|1544074 1544823|1544823|1544823 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3L + 1544612 1544634 3'utr CG7852 FlyBase G20537.1 AGTTGATTTTACCAAAGAATCTT 5 1544621 0.724904695 3 5 28 1 0.77815125 0 0.2 0.333333333 5 0 0 6 3L:1544612-1544634 8 12 442 FBgn0035229 480 10.39 15.81 0.025 1.154956689 0.759013283 1 1 1 0.5 dme-miR-970-3p 7mer-A1 CTTATGA 3L 1555544 1555550 - 3L_1555544_1555550_- 0.817730075 0.805904459 0.811817267 0.008361962 CG12099 FBtr0072829|FBtr0072828 1555361|1555361 1555568|1555568 3L - 1555526 1555569 stop_codon CG12099 FlyBase G33371.1 AAGAGCTAGATGATGATCGCTTATGAAGTTACAAGATTTATTGT 10 1555556 0.972331617 6 10 61 1 1.176091259 0.466666667 0.4 0.6 10 0 0 15 3L:1555526-1555569 7 CG12099 FBtr0072828|FBtr0072829 1555361|1555361 1555568|1555568 CTTATGA 7mer-A1 dme-miR-970-3p 3L - 1555529 1555568 3'utr CG12099 FlyBase G25241.1 AGAGCTAGATGATGATCGCTTATGAAGTTACAAGATTTAT 6 1555548 0.950875887 4 6 39 1 1.079181246 0.166666667 0.5 0.75 6 0 0 12 3L:1555529-1555568 7 8 443 FBgn0035232 2030.816667 84.03 129.1233333 0.003939302 0.095204094 0.061956269 6 -2 2 0.5 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 15609176 15609182 - 3L_15609176_15609182_- 0.599256488 0.65456088 0.626908684 0.039106116 CG7650 FBtr0075591 15608705 15609453 3L - 15609136 15609261 3'utr CG7650 FlyBase G36989.1 ACACGACTTCTTGGAATCTCCGAGTTACTTGTCAGTTTAAGCCAGGGCTTTAGAATTATACGCAAATTTTGACCAAATATGTGTTCGTAAGATTAGCATTTAAGAGAACTTAAGCCCGCCCTCCGT 81 15609182 0.876618309 18 75 704 0.930693069 1.672097858 0.138613861 0.209876543 0.366336634 81 6 1 94 3L:15609136-15609261 7 CG7650 FBtr0075591 15608705 15609453 TGTGTTC 7mer-m8 dme-miR-317-3p 3L - 15609137 15609288 3'utr CG7650 FlyBase G27928.1 TATAATTTGTATCAACAAAAGAAACTAACACGACTTCTTGGAATCTCCGAGTTACTTGTCAGTTTAAGCCAGGGCTTTAGAATTATACGCAAATTTTGACCAAATATGTGTTCGTAAGATTAGCATTTAAGAGAACTTAAGCCCGCCCTCCG 59 15609182 0.987765252 21 53 469 0.926315789 1.944482672 0.105263158 0.474576271 0.673684211 59 7 0 88 3L:15609137-15609288 7 42 444 FBgn0036519 328.6966667 23.90333333 36.63666667 0.127777383 1.757077116 1.146392503 0 0 0 0.5 dme-miR-317-3p 6mer3-8 TGTGTT 3L 1574324 1574329 + 3L_1574324_1574329_+ 0.918527738 0.543051259 0.730789499 0.265501909 CG12004 FBtr0072746|FBtr0072745 1574027|1574027 1574732|1574732 3L + 1574311 1574418 3'utr CG12004 FlyBase G27161.1 TTGCCTCTGCGTCTGTGTTTCTGTATTTCCTACGTTTACACTCTACACCTAAACTTAAGCGTTTTTTAAAACAACTTATTTAGACGTTAGCTATGTACGAAACGAACT 24 1574324 0.963673178 12 23 184 0.962962963 1.414973348 0.259259259 0.125 0.222222222 24 1 0 26 3L:1574311-1574418 6 CG12004 FBtr0072745|FBtr0072746 1574027|1574027 1574732|1574732 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 1574308 1574362 3'utr CG12004 FlyBase G20560.1 GAGTTGCCTCTGCGTCTGTGTTTCTGTATTTCCTACGTTTACACTCTACACCTAA 13 1574328 0.991571634 9 12 132 1 1.322219295 0.095238095 0.538461538 0.714285714 13 0 0 21 3L:1574308-1574362 6 9.5 445 FBgn0035236 1184.423333 63.35333333 97.16 0.008020781 0.149952647 0.097776863 0 -4 -2 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 1574627 1574633 + 3L_1574627_1574633_+ 0.589073162 0.604858668 0.596965915 0.011162034 CG12004 FBtr0072746|FBtr0072746|FBtr0072746|FBtr0072745|FBtr0072745|FBtr0072745 1574027|1574027|1574027|1574027|1574027|1574027 1574732|1574732|1574732|1574732|1574732|1574732 3L + 1574614 1574645 3'utr CG12004 FlyBase G27163.1 TTGACCACCCTTTTGTGATAAGCTCTCGTCGT 94 1574625 0.710938974 4 87 718 0.941176471 1.204119983 0.235294118 0.234042553 0.394957983 94 1 6 112 3L:1574614-1574645 7 CG12004 FBtr0072745|FBtr0072745|FBtr0072745|FBtr0072746|FBtr0072746|FBtr0072746 1574027|1574027|1574027|1574027|1574027|1574027 1574732|1574732|1574732|1574732|1574732|1574732 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 1574602 1574645 3'utr CG12004 FlyBase G20562.1 TGATTTCCCCTTTTGACCACCCTTTTGTGATAAGCTCTCGTCGT 51 1574625 0.738337802 7 49 382 0.972222222 1.544068044 0.25 0.333333333 0.527777778 51 1 1 70 3L:1574602-1574645 7 72 446 FBgn0035236 1184.423333 63.35333333 97.16 0.060789076 1.136483216 0.741045698 2 2 2 0.5 dme-miR-317-3p 8mer-A1 TGTGTTCA 3L 15819805 15819812 - 3L_15819805_15819812_- 0.585565441 0.601217484 0.593391463 0.011067706 DCP2 FBtr0304975 15818732 15821444 3L - 15819766 15820013 3'utr DCP2 FlyBase G37008.1 TTCCTATAATTCGTAAGCATGTCACGTTAGCATGTTAACTAATTCCTCCTTCAAACGTAGTCTCCAATGTGTGAAACAGTTGCCTATTAGCGTTTATCTTTAGACTAAGCAATGACCAGCAATGTCTCCAAGGTGGTAACATCAGAGCCAATAGGTTTACATCACCGAAAATCAAAAGAAGTTCCCTGTAACTCGGCCTTTTGTGTTCAATTCGAAAGTAGTTCTCTAAGCGTATCGGCCGAAAACAG 66 15819813 0.980954254 24 63 582 0.960526316 1.86332286 0.105263158 0.136363636 0.25 66 3 0 73 3L:15819766-15820013 8 DCP2 FBtr0304975 15818732 15821444 TGTGTTCA 8mer-A1 dme-miR-317-3p 3L - 15819755 15819834 3'utr DCP2 FlyBase G27947.1 AGTTCCCTGTAACTCGGCCTTTTGTGTTCAATTCGAAAGTAGTTCTCTAAGCGTATCGGCCGAAAACAGTAAGAAATTTG 24 15819813 0.987805672 9 24 214 1 1.544068044 0.228571429 0.333333333 0.542857143 24 0 0 35 3L:15819755-15819834 8 22 447 FBgn0036534 5151.046667 115.94 176.9933333 0.004270977 0.189753321 0.124298467 1 1 1 0.5 dme-bantam-3p 6mer3-8 TGATCT 3L 15820468 15820473 - 3L_15820468_15820473_- 0.864601591 0.735461765 0.800031678 0.091315628 DCP2 FBtr0304975 15818732 15821444 3L - 15820417 15820518 3'utr DCP2 FlyBase G37011.1 AATGTAAATAATTAAATTGTGATATAGTATTTCTTAGCACAATTGTGATCTTAGCAAACGGCTGGCAACTACAAAAACTTTTATAAGCGCAACCACAACACC 663 15820469 0.981746994 17 638 4683 0.958083832 1.823908741 0.032335329 0.214177979 0.376047904 663 24 11 800 3L:15820417-15820518 6 DCP2 FBtr0304975 15818732 15821444 TGATCT 6mer3-8 dme-bantam-3p 3L - 15820439 15820619 3'utr DCP2 FlyBase G27951.1 AAATAATATTTCCGGGCCGTATTACTTACTGCCCGCCCCCACCTATGAAAGTTAGACGAGAGAGGAGAGAAAGATGTGTAAGAAATATTACAAATAATAACAATGTAAATAATTAAATTGTGATATAGTATTTCTTAGCACAATTGTGATCTTAGCAAACGGCTGGCAACTACAAAAACTT 500 15820468 0.966631548 27 476 3364 0.951822917 1.96082739 0.029947917 0.406 0.61328125 500 30 7 731 3L:15820439-15820619 6 379.5 448 FBgn0036534 5151.046667 115.94 176.9933333 0.073674347 3.273244782 2.144148556 -4 -5 -4.5 0.5 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3L 15991754 15991761 + 3L_15991754_15991761_+ 0.584572705 0.5472582 0.565915452 0.026385336 Hip14 FBtr0333577 15990856 15992464 3L + 15991741 15991780 3'utr Hip14 FlyBase G30694.1 AATTATGCACTAGTCTAGTCAGAAAATTATTTAAGTAAAA 29 15991751 0.716583706 8 25 207 0.875 1.447158031 0.125 0.103448276 0.1875 29 4 0 28 3L:15991741-15991780 8 Hip14 FBtr0333577 15990856 15992464 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L + 15991738 15991804 3'utr Hip14 FlyBase G23218.1 TCTAATTATGCACTAGTCTAGTCAGAAAATTATTTAAGTAAAATGTTAAAGTGCAACTACAGCCACA 25 15991752 0.819522677 9 23 148 0.888888889 1.505149978 0.027777778 0.32 0.527777778 25 4 0 32 3L:15991738-15991804 8 25 449 FBgn0259824 761.04 23.55 36.16 0.032849785 1.061571125 0.691371681 3 2 2.5 0.5 dme-miR-252-5p 8mer-A1 GTACTTAA 3L 16032591 16032598 + 3L_16032591_16032598_+ 0.391956914 0.395325872 0.393641393 0.002382243 Notum FBtr0075435 16031340 16032752 3L + 16032548 16032666 3'utr Notum FlyBase G30712.1 AAGCCTGTACAGAACTGGTTGAAGTTTAGCCCTAAGAATTGTTGTACTTAAACTTAGTGATAATCATAAACGTAATGCAATTCGCAAGCTTATTAGCTTTTGTTAGCGTTCTTCAAATG 87 16032590 0.972755261 10 82 776 0.951923077 1.995635195 0.115384615 0.16091954 0.298076923 87 5 0 99 3L:16032548-16032666 8 Notum FBtr0075435 16031340 16032752 GTACTTAA 8mer-A1 dme-miR-252-5p 3L + 16032544 16032617 3'utr Notum FlyBase G23231.1 TGCTAAGCCTGTACAGAACTGGTTGAAGTTTAGCCCTAAGAATTGTTGTACTTAAACTTAGTGATAATCATAAA 58 16032590 0.75971643 8 57 519 0.97752809 1.939519253 0.078651685 0.396551724 0.606741573 58 2 0 87 3L:16032544-16032617 8 61 450 FBgn0044028 1178.056667 37.54333333 57.65 0.051780192 1.624789133 1.05810928 1 1 1 0.5 dme-miR-1003-3p 7mer-A1 TGTGAGA 3L 16081969 16081975 + 3L_16081969_16081975_+ 0.580447559 0.66555227 0.622999914 0.06017811 Mbs FBtr0112852|FBtr0112851|FBtr0301575|FBtr0301473|FBtr0308213|FBtr0308214|FBtr0301472|FBtr0308215|FBtr0112850 16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844 16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026 3L + 16081862 16081986 3'utr Mbs FlyBase G30741.2 CTGTTATTTATTAAATTCGCCTAAGAGATTTTGTGTTACTCGTAAATGGAAACGATAATCAAGCATAAACAACCATAAGAACGTGAATTGTGTAATATGTAAAATTGTGTGAGAAAATATTTATG 128 16081967 0.741365912 19 120 976 0.97260274 1.851258349 0.164383562 0.134920635 0.253424658 126 3 1 142 3L:16081862-16081986 7 Mbs FBtr0301472|FBtr0308215|FBtr0112850|FBtr0308214|FBtr0301473|FBtr0308213|FBtr0112852|FBtr0112851|FBtr0301575 16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844|16080844 16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026|16082026 TGTGAGA 7mer-A1 dme-miR-1003-3p 3L + 16081929 16082033 3'utr Mbs FlyBase G23257.1 AACAACCATAAGAACGTGAATTGTGTAATATGTAAAATTGTGTGAGAAAATATTTATGAAAATTTGATTCAAATACGAAACTTAATAAATGTGATCGCAAGCAAA 94 16081967 0.803345873 11 91 629 0.970149254 2.113943352 0.052238806 0.35106383 0.544776119 94 4 0 130 3L:16081929-16082033 7 58 451 FBgn0005536 2947.596667 72.49666667 111.4433333 0.019677048 0.800036783 0.520443873 2 2 2 0.5 dme-miR-277-3p 7mer-m8 TGCATTT 3L 1638011 1638017 - 3L_1638011_1638017_- 0.581379704 0.538493685 0.559936694 0.030324981 metl FBtr0072814|FBtr0072813 1637940|1637940 1638040|1638040 3L - 1637994 1638037 3'utr metl FlyBase G33402.1 AATTTAGACGAATAGTTCTGTGCATTTTAAACCTTGTTCAAATC 5 1638018 0.985561738 5 5 43 1 0.954242509 0 0.6 0.777777778 5 0 0 9 3L:1637994-1638037 7 metl FBtr0072814|FBtr0072813 1637940|1637940 1638040|1638040 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 1637993 1638037 3'utr metl FlyBase G25265.1 AATTTAGACGAATAGTTCTGTGCATTTTAAACCTTGTTCAAATCA 6 1638012 0.992272545 5 5 52 0.7 0.84509804 0 0.5 0.7 6 3 0 7 3L:1637993-1638037 7 5.5 452 FBgn0035247 536.0166667 56.80666667 87.84333333 0.010260875 0.096819622 0.062611467 1 -5 -2 0.5 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 16470650 16470657 - 3L_16470650_16470657_- 0.384303793 0.381061568 0.382682681 0.002292582 aos FBtr0075408 16470384 16471298 3L - 16470594 16470686 3'utr aos FlyBase G37291.1 CGAAGGCAGTTTGAAACTGTGGCAACTCTGGCAGCTATTTTAGTGCAATTTTTGTGACGCCTTCACAGCCACTTCTCCGGAATTTGAGCAAGT 1274 16470658 0.868090257 17 1256 9187 0.984866828 2.910357557 0.401331719 0.226059655 0.4031477 1274 24 1 1627 3L:16470594-16470686 8 aos FBtr0075408 16470384 16471298 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L - 16470587 16470688 3'utr aos FlyBase G28164.1 AGCGAAGGCAGTTTGAAACTGTGGCAACTCTGGCAGCTATTTTAGTGCAATTTTTGTGACGCCTTCACAGCCACTTCTCCGGAATTTGAGCAAGTAAATTAG 1016 16470658 0.981606195 18 1003 7362 0.987228608 2.411058239 0.344827586 0.382874016 0.599616858 1016 15 5 1546 3L:16470587-16470688 8 1133 453 FBgn0004569 11.33333333 0.5 0.773333333 99.97058824 2266 1465.086207 1 1 1 0.5 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3L 16576661 16576667 + 3L_16576661_16576667_+ 0.534149354 0.546659422 0.540404388 0.008845906 mbf1 FBtr0305570|FBtr0075394 16575868|16575868 16576871|16576871 3L + 16576574 16576687 3'utr mbf1 FlyBase G30878.1 TATCGTGTAAGGCTCTTGAACTGTGCGTTTACTAATGCATTATACATATTATACAAAAACATATGCTAAATGTATTTAGAAACATTTTCTAGTCTACAAAATATTTAAATAATT 91 16576660 0.94012809 11 87 657 0.974137931 1.752048448 0.00862069 0.241758242 0.405172414 91 2 1 113 3L:16576574-16576687 7 mbf1 FBtr0305570|FBtr0075394 16575868|16575868 16576871|16576871 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 16576635 16576682 3'utr mbf1 FlyBase G23354.1 TATGCTAAATGTATTTAGAAACATTTTCTAGTCTACAAAATATTTAAA 61 16576660 0.923070235 6 61 428 1 1.886490725 0.012987013 0.196721311 0.363636364 61 0 0 77 3L:16576635-16576682 7 69 454 FBgn0262732 2231.09 243.8166667 374.3166667 0.030926587 0.282999521 0.184335901 1 1 1 0.5 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3L 16723835 16723842 + 3L_16723835_16723842_+ 0.611051213 0.626036486 0.61854385 0.010596207 Dab FBtr0305085|FBtr0305084|FBtr0333625|FBtr0330190|FBtr0305086|FBtr0333626|FBtr0330189|FBtr0075318 16723340|16723340|16723340|16723748|16723340|16723340|16723748|16723340 16724415|16724415|16724415|16724415|16724415|16724415|16724415|16724575 3L + 16723821 16723847 3'utr Dab FlyBase G30935.1 ATTCGCCACATATATCTAGTCAACTCA 13 16723833 0.711802589 3 13 81 1 1.255272505 0 0.307692308 0.5 13 0 0 18 3L:16723821-16723847 8 Dab FBtr0330189|FBtr0075318|FBtr0305086|FBtr0333626|FBtr0333625|FBtr0330190|FBtr0305085|FBtr0305084 16723748|16723340|16723340|16723340|16723340|16723748|16723340|16723340 16724415|16724575|16724415|16724415|16724415|16724415|16724415|16724415 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L + 16723811 16723850 3'utr Dab FlyBase G23405.1 ACGATATTTAATTCGCCACATATATCTAGTCAACTCAATC 6 16723834 0.97049004 4 6 41 1 1 0 0.5 0.7 6 0 0 10 3L:16723811-16723850 8 9.5 455 FBgn0000414 579.9766667 8.573333333 13.19 0.016379969 1.108087092 0.720242608 2 1 1.5 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 16777524 16777529 - 3L_16777524_16777529_- 0.862619239 0.737851009 0.800235124 0.08822444 CG13025 FBtr0333610|FBtr0333610|FBtr0333610|FBtr0075346|FBtr0075346|FBtr0075346 16777447|16777447|16777447|16776529|16776529|16776529 16777593|16777593|16777593|16777593|16777593|16777593 3L - 16777487 16777539 3'utr CG13025 FlyBase G37456.1 TAGCTAATTTCTGTGAAATATGTGACTACTGATATAAACGAGCTTTTAAGCTA 14 16777531 0.721034062 7 10 108 0.777777778 1.146128036 0.222222222 0.214285714 0.388888889 14 4 0 14 3L:16777487-16777539 6 CG13025 FBtr0075346|FBtr0075346|FBtr0075346|FBtr0333610|FBtr0333610|FBtr0333610 16776529|16776529|16776529|16777447|16777447|16777447 16777593|16777593|16777593|16777593|16777593|16777593 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 16777483 16777543 3'utr CG13025 FlyBase G28288.1 CTTTTAGCTAATTTCTGTGAAATATGTGACTACTGATATAAACGAGCTTTTAAGCTAAGTT 22 16777531 0.684653915 8 21 183 0.962962963 1.113943352 0.222222222 0.227272727 0.37037037 22 0 1 26 3L:16777483-16777543 6 14 456 FBgn0036660 194.1566667 10.47 16.01333333 0.072106718 1.337153773 0.87427144 2 2 2 0.5 dme-miR-277-3p 6mer3-8 TGCATT 3L 16785143 16785148 + 3L_16785143_16785148_+ 0.604001993 0.74881102 0.676406506 0.102395426 CG9706 FBtr0075326|FBtr0075327 16785050|16785050 16785246|16785246 3L + 16785114 16785192 3'utr CG9706 FlyBase G30945.1 AACAACTAATTCTAGGATTAGCAGACGTTTGCATTCTGTAGGCTAGCGAAATTACAAATTCCCGCCTTGGTATTGTTTT 23 16785150 0.957349062 8 23 165 1 1.477121255 0.033333333 0.304347826 0.466666667 23 0 0 30 3L:16785114-16785192 6 CG9706 FBtr0075326|FBtr0075327 16785050|16785050 16785246|16785246 TGCATT 6mer3-8 dme-miR-277-3p 3L + 16785121 16785164 3'utr CG9706 FlyBase G23415.1 AATTCTAGGATTAGCAGACGTTTGCATTCTGTAGGCTAGCGAAA 9 16785142 0.974375068 3 9 61 1 1.204119983 0.375 0.555555556 0.75 9 0 0 16 3L:16785121-16785164 6 12.5 457 FBgn0036662 379.6666667 23.33333333 36.06666667 0.032923617 0.535714286 0.346580407 -7 1 -3 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 16995271 16995277 - 3L_16995271_16995277_- 0.724755357 0.737051466 0.730903411 0.008694656 CG3764 FBtr0321285|FBtr0321285|FBtr0321285|FBtr0075297|FBtr0075297|FBtr0075297|FBtr0332122|FBtr0332122|FBtr0332122 16994715|16994715|16994715|16994715|16994715|16994715|16994715|16994715|16994715 16995408|16995408|16995408|16995408|16995408|16995408|16995408|16995408|16995408 3L - 16995191 16995444 stop_codon CG3764 FlyBase G37509.2 AAGATCAGCCGCAAGTGCGGCATCAGCTTCAGGTGACAGGTTGTTGCCGTCTGCTGAGCTAGGACATTGCCAAACATTTTATCACTCAACGTTTCAAAGAGCTCTTCTCATGCATCATCCAAAGCGAAACAAGCAAATACTCCAGCGAATTTTAATTTCACTGATTTTGTGATATATTTATATATGTGTAGGAATCTAGCGCCTAAATGCAGGATACGTTTATGAGCCGTAGCTTAGCCGTAGCCCTCGAACGA 438 16995279 0.941714361 46 399 4122 0.914342629 1.457692703 0.109561753 0.116438356 0.229083665 438 28 15 459 3L:16995191-16995444 7 CG3764 FBtr0332122|FBtr0332122|FBtr0332122|FBtr0321285|FBtr0321285|FBtr0321285|FBtr0075297|FBtr0075297|FBtr0075297 16994715|16994715|16994715|16994715|16994715|16994715|16994715|16994715|16994715 16995408|16995408|16995408|16995408|16995408|16995408|16995408|16995408|16995408 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 16995196 16995461 stop_codon CG3764 FlyBase G28333.2 CATATATTCACACGCCCAAGATCAGCCGCAAGTGCGGCATCAGCTTCAGGTGACAGGTTGTTGCCGTCTGCTGAGCTAGGACATTGCCAAACATTTTATCACTCAACGTTTCAAAGAGCTCTTCTCATGCATCATCCAAAGCGAAACAAGCAAATACTCCAGCGAATTTTAATTTCACTGATTTTGTGATATATTTATATATGTGTAGGAATCTAGCGCCTAAATGCAGGATACGTTTATGAGCCGTAGCTTAGCCGTAGCCCTCG 313 16995279 0.989109754 38 262 2654 0.856275304 1.450249108 0.133603239 0.38658147 0.611336032 313 57 14 423 3L:16995196-16995461 7 193.5 458 FBgn0036684 919.4833333 18.43 28.02333333 0.210444271 10.49918611 6.904960152 2 2 2 0.5 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3L 17041316 17041322 - 3L_17041316_17041322_- 0.801703376 0.680776195 0.741239785 0.085508443 scaf6 FBtr0301554 17040932 17041684 3L - 17041291 17041347 5'utr scaf6 FlyBase G37556.1 ATATACTTTCGGACTTAAATGATTTCCAAAGATATTGTCATAGACTCATAGATGGCA 6 17041324 0.98004601 3 6 48 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3L:17041291-17041347 7 scaf6 FBtr0301554 17040932 17041684 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 17041292 17041338 5'utr scaf6 FlyBase G28366.1 CGGACTTAAATGATTTCCAAAGATATTGTCATAGACTCATAGATGGC 10 17041324 0.753904865 4 10 71 1 1.041392685 0 0.1 0.181818182 10 0 0 11 3L:17041292-17041338 7 7 459 FBgn0261872 719.3333333 34.71333333 53.11 0.009731233 0.201651623 0.131801921 2 2 2 0.5 dme-miR-932-5p 7mer-A1 GAATTGA 3L 17054769 17054775 + 3L_17054769_17054775_+ 0.447165951 0.482861458 0.465013704 0.02524053 rogdi FBtr0075282|FBtr0075283 17054365|17054365 17055454|17055454 3L + 17054726 17054822 3'utr rogdi FlyBase G31086.1 CTCCAATTATGCATCAAAATGCATCTAAATAGCATTAGGCTGAGAATTGAGAACAGAGAACGTTTGTGAAAACCAATTGTGTTTGTATGTGTAACAA 53 17054760 0.927686308 10 53 244 1 1.806179974 0.265625 0.132075472 0.28125 53 0 0 64 3L:17054726-17054822 7 rogdi FBtr0075283|FBtr0075282 17054365|17054365 17055454|17055454 GAATTGA 7mer-A1 dme-miR-932-5p 3L + 17054746 17054821 3'utr rogdi FlyBase G23516.1 GCATCTAAATAGCATTAGGCTGAGAATTGAGAACAGAGAACGTTTGTGAAAACCAATTGTGTTTGTATGTGTAACA 36 17054772 0.688269252 8 35 150 1 1.77815125 0.133333333 0.444444444 0.666666667 36 0 0 60 3L:17054746-17054821 7 35 460 FBgn0036697 653.9633333 39.12 59.84 0.05351982 0.894683027 0.584893048 9 -3 3 0.5 dme-miR-283-5p 8mer-m1 TGATATTT 3L 174070 174077 + 3L_174070_174077_+ 0.456656801 0.448360225 0.452508513 0.005866582 p130CAS FBtr0299866|FBtr0072475|FBtr0299864|FBtr0299865|FBtr0301889 173907|173907|173907|173907|173907 174517|174517|174517|174517|174517 3L + 174048 174092 3'utr p130CAS FlyBase G26680.1 TTGCCGCTTATATTTTGCATTGTGATATTTTGAGCAAAACATCTG 23 174067 0.988120099 9 20 254 0.891891892 1.041392685 0.054054054 0.347826087 0.594594595 23 2 2 33 3L:174048-174092 8 p130CAS FBtr0299865|FBtr0299864|FBtr0072475|FBtr0299866|FBtr0301889 173907|173907|173907|173907|173907 174517|174517|174517|174517|174517 TGATATTT 8mer-m1 dme-miR-283-5p 3L + 174049 174086 3'utr p130CAS FlyBase G20176.1 TGCCGCTTATATTTTGCATTGTGATATTTTGAGCAAAA 16 174066 0.664186215 5 14 176 0.769230769 0.823908741 0.269230769 0.4375 0.653846154 16 4 2 20 3L:174049-174086 8 19.5 461 FBgn0035101 655.3333333 27.27 41.73 0.029755849 0.715071507 0.46728972 3 4 3.5 0.5 dme-miR-970-3p 8mer-A1 TCTTATGA 3L 17477817 17477824 - 3L_17477817_17477824_- 0.554837506 0.560916771 0.557877138 0.004298714 CG13733 FBtr0075225 17477793 17477948 3L - 17477810 17477841 3'utr CG13733 FlyBase G37602.1 ACATACATATATAGATCTCTTATGAACAGTAA 30 17477822 0.702536344 4 30 224 1 1.633468456 0 0.266666667 0.488372093 30 0 0 43 3L:17477810-17477841 8 CG13733 FBtr0075225 17477793 17477948 TCTTATGA 8mer-A1 dme-miR-970-3p 3L - 17477811 17477841 3'utr CG13733 FlyBase G28400.1 ACATACATATATAGATCTCTTATGAACAGTA 23 17477821 0.71618281 5 23 174 1 1.544068044 0 0.391304348 0.6 23 0 0 35 3L:17477811-17477841 8 26.5 462 FBgn0036729 1.666666667 0.2 0.32 15.9 132.5 82.8125 -2 -3 -2.5 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 17526799 17526804 - 3L_17526799_17526804_- 0.951368015 0.996155267 0.973761641 0.031669404 Edc3 FBtr0075208|FBtr0075208|FBtr0075208 17525331|17525331|17525331 17526958|17526958|17526958 3L - 17526739 17526857 3'utr Edc3 FlyBase G37616.1 AACAATAACAATGACACACCCGCACACTTGTGATGATCATCAAGTCCAGTTTCCTGTGAATCTAGCTCTTAGTACTCTTCTCTCATATATTACTCAAGTTAAACATTTTGTTCTACGGC 151 17526829 0.986511311 23 133 1144 0.876344086 1.257945095 0.080645161 0.17218543 0.327956989 151 15 8 163 3L:17526739-17526857 6 Edc3 FBtr0075208|FBtr0075208|FBtr0075208 17525331|17525331|17525331 17526958|17526958|17526958 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 17526764 17526847 3'utr Edc3 FlyBase G28414.1 ATGACACACCCGCACACTTGTGATGATCATCAAGTCCAGTTTCCTGTGAATCTAGCTCTTAGTACTCTTCTCTCATATATTACT 110 17526808 0.796905252 19 99 883 0.911949686 1.207125493 0.100628931 0.345454545 0.547169811 110 6 8 145 3L:17526764-17526847 6 58 463 FBgn0036735 1377.103333 41.10333333 63.21333333 0.042117391 1.411077771 0.917527948 25 4 14.5 0.5 dme-miR-2a-2-5p 6mer3-8 TGATGA 3L 17526822 17526827 - 3L_17526822_17526827_- 0.62891485 0.51092133 0.56991809 0.083434004 Edc3 FBtr0075208 17525331 17526958 3L - 17526739 17526857 3'utr Edc3 FlyBase G37616.1 AACAATAACAATGACACACCCGCACACTTGTGATGATCATCAAGTCCAGTTTCCTGTGAATCTAGCTCTTAGTACTCTTCTCTCATATATTACTCAAGTTAAACATTTTGTTCTACGGC 151 17526829 0.986511311 23 133 1144 0.876344086 1.257945095 0.080645161 0.17218543 0.327956989 151 15 8 163 3L:17526739-17526857 6 Edc3 FBtr0075208 17525331 17526958 TGATGA 6mer3-8 dme-miR-2a-2-5p 3L - 17526764 17526847 3'utr Edc3 FlyBase G28414.1 ATGACACACCCGCACACTTGTGATGATCATCAAGTCCAGTTTCCTGTGAATCTAGCTCTTAGTACTCTTCTCTCATATATTACT 110 17526808 0.796905252 19 99 883 0.911949686 1.207125493 0.100628931 0.345454545 0.547169811 110 6 8 145 3L:17526764-17526847 6 51.5 464 FBgn0036735 1377.103333 41.10333333 63.21333333 0.037397339 1.252939745 0.81470154 2 -19 -8.5 0.5 dme-miR-33-5p 8mer-A1 CAATGCAA 3L 17560479 17560486 - 3L_17560479_17560486_- 0.327299059 0.383180346 0.355239702 0.039513975 Eip74EF FBtr0075203|FBtr0075204|FBtr0100411|FBtr0075202|FBtr0305796 17560156|17560156|17558670|17560156|17560156 17561769|17561769|17561769|17561769|17561769 3L - 17560467 17560498 3'utr Eip74EF FlyBase G37661.1 AACCGCAATCCTCAATGCAATATACCGACAAC 5 17560478 0.794724932 2 3 14 0.714285714 0.698970004 0 0.4 0.571428571 5 2 0 5 3L:17560467-17560498 8 Eip74EF FBtr0075203|FBtr0305796|FBtr0075202|FBtr0100411|FBtr0075204 17560156|17560156|17560156|17558670|17560156 17561769|17561769|17561769|17561769|17561769 CAATGCAA 8mer-A1 dme-miR-33-5p 3L - 17560465 17560502 3'utr Eip74EF FlyBase G28449.1 CTGCAACCGCAATCCTCAATGCAATATACCGACAACTT 7 17560484 0.968354673 3 4 27 0.8 0.602059991 0.1 0.285714286 0.5 7 1 1 8 3L:17560465-17560502 8 5.5 465 FBgn0000567 175.3133333 4.123333333 6.33 0.0313724 1.333872272 0.868878357 -8 -2 -5 0.5 dme-miR-1008-3p 8mer-A1 AGCTGTGA 3L 1759130 1759137 + 3L_1759130_1759137_+ 0.505755598 0.41806476 0.461910179 0.062006759 CG8001 FBtr0334073|FBtr0300292|FBtr0334074|FBtr0072774 1759035|1759035|1759035|1759035 1759208|1759208|1759208|1759208 3L + 1759111 1759156 3'utr CG8001 FlyBase G27208.1 TGTTAGAAAGCGTTTCTGAAGCTGTGAATTTGTAACCGTAACACAT 72 1759126 0.678658016 8 68 594 0.952941176 1.607455023 0.235294118 0.138888889 0.270588235 72 3 1 81 3L:1759111-1759156 8 CG8001 FBtr0334074|FBtr0072774|FBtr0334073|FBtr0300292 1759035|1759035|1759035|1759035 1759208|1759208|1759208|1759208 AGCTGTGA 8mer-A1 dme-miR-1008-3p 3L + 1759106 1759156 3'utr CG8001 FlyBase G20596.1 AACTATGTTAGAAAGCGTTTCTGAAGCTGTGAATTTGTAACCGTAACACAT 55 1759127 0.71612987 8 52 453 0.941176471 1.425968732 0.458823529 0.454545455 0.647058824 55 3 2 80 3L:1759106-1759156 8 63 466 FBgn0035268 473.3333333 22.80666667 34.95333333 0.133098592 2.76235019 1.802403204 4 3 3.5 0.5 dme-miR-308-3p 8mer-m1 CTGTGATT 3L 17630070 17630077 + 3L_17630070_17630077_+ 0.377650196 0.379415488 0.378532842 0.001248256 CG7510 FBtr0333121|FBtr0075182 17629985|17629985 17630971|17630480 3L + 17630028 17630124 3'utr CG7510 FlyBase G31157.1 CTTGATTTCCTGTTTAGTTTATTTTGAATGTAATTTTGACTGCTGTGATTGTACGCCAAACAAGAACGCACACACAATGCAGTCAGTTGTGTGTGGG 151 17630077 0.756423141 12 144 1193 0.954545455 2.225309282 0.068181818 0.125827815 0.25 151 8 0 168 3L:17630028-17630124 8 CG7510 FBtr0333121|FBtr0075182 17629985|17629985 17630971|17630480 CTGTGATT 8mer-m1 dme-miR-308-3p 3L + 17630046 17630124 3'utr CG7510 FlyBase G23571.1 TTATTTTGAATGTAATTTTGACTGCTGTGATTGTACGCCAAACAAGAACGCACACACAATGCAGTCAGTTGTGTGTGGG 111 17630077 0.79662595 11 104 864 0.977142857 2.23299611 0.165714286 0.405405405 0.622857143 111 4 0 171 3L:17630046-17630124 8 120 467 FBgn0036741 369.9166667 11.27333333 17.24666667 0.324397387 10.644589 6.957866254 -7 -7 -7 0.5 dme-miR-283-5p 6mer3-8 TGATAT 3L 1772388 1772393 - 3L_1772388_1772393_- 0.833030783 0.469596216 0.651313499 0.25698707 CG13933 FBtr0332881|FBtr0072792 1771807|1771807 1772601|1772601 3L - 1772367 1772430 3'utr CG13933 FlyBase G33478.1 AGCTTAACGATCAGTTCTGAAATGACTGAATTTACTTTGATATCGAAAGCGAATAGTTATGTAT 18 1772394 0.981100677 7 18 132 1 1.322219295 0.142857143 0.166666667 0.285714286 18 0 0 21 3L:1772367-1772430 6 CG13933 FBtr0072792|FBtr0332881 1771807|1771807 1772601|1772601 TGATAT 6mer3-8 dme-miR-283-5p 3L - 1772367 1772430 3'utr CG13933 FlyBase G25325.1 AGCTTAACGATCAGTTCTGAAATGACTGAATTTACTTTGATATCGAAAGCGAATAGTTATGTAT 10 1772410 0.980309726 4 10 72 1 1.146128036 0.142857143 0.4 0.571428571 10 0 0 14 3L:1772367-1772430 6 5.5 468 FBgn0035270 373.6633333 14.21333333 21.71 0.014719132 0.3869606 0.253339475 1 17 9 0.5 dme-miR-980-5p 6mer3-8 GAAAAA 3L 17849217 17849222 + 3L_17849217_17849222_+ 0.959941731 0.972817151 0.966379441 0.009104353 CG7430 FBtr0331810|FBtr0075140 17849144|17849144 17849372|17849601 3L + 17849195 17849248 3'utr CG7430 FlyBase G31171.1 AATCTTTGAATAACCCCTATTCGAAAAATTATCCTGACGGCCGAAACGACAGTC 10 17849223 0.967646001 5 10 57 1 1.079181246 0.5 0.1 0.25 10 0 0 12 3L:17849195-17849248 6 CG7430 FBtr0331810|FBtr0075140 17849144|17849144 17849372|17849601 GAAAAA 6mer3-8 dme-miR-980-5p 3L + 17849178 17849236 3'utr CG7430 FlyBase G23583.1 TTTTGCACCGCGTTTGAAATCTTTGAATAACCCCTATTCGAAAAATTATCCTGACGGCC 6 17849223 0.969770925 5 6 39 1 1 0.2 0.5 0.7 6 0 0 10 3L:17849178-17849236 6 6.5 469 FBgn0036762 1043.3 65.57333333 100.5333333 0.006230231 0.099125661 0.064655172 -6 -6 -6 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 17899204 17899210 - 3L_17899204_17899210_- 0.734863068 0.752493224 0.743678146 0.012466363 Prestin FBtr0075153|FBtr0075153|FBtr0075153 17898887|17898887|17898887 17899268|17899268|17899268 3L - 17899086 17899341 stop_codon Prestin FlyBase G37766.1 CGAAGGACCTTTTGAGATCTTCCCCACCCTGCACGATTGTGTGGAATATGCCAATGCCTGTCGAACAGCGTGAGAGGGTGTTCCTGCTCCAGACACCCCAGTTAACTGGGGCAGAGAGCCAAACCACGTTTTGTGATATGTCCAAGTGATAGCTTGTGAATCGTAGCATCAAAACCCCTTCCTAGTTGCTAAAATCTATTTTAAACTGAATAGAAACAATGTCGCCGTCTACAATCAAGCAGAATAGGCTAAGTTT 99 17899212 0.982029089 25 88 655 0.905172414 1.419129308 0.129310345 0.131313131 0.25862069 99 8 3 105 3L:17899086-17899341 7 Prestin FBtr0075153|FBtr0075153|FBtr0075153 17898887|17898887|17898887 17899268|17899268|17899268 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 17899085 17899239 3'utr Prestin FlyBase G28536.1 TAACTGGGGCAGAGAGCCAAACCACGTTTTGTGATATGTCCAAGTGATAGCTTGTGAATCGTAGCATCAAAACCCCTTCCTAGTTGCTAAAATCTATTTTAAACTGAATAGAAACAATGTCGCCGTCTACAATCAAGCAGAATAGGCTAAGTTTG 79 17899211 0.983440977 12 71 556 0.92 1.458637849 0.288 0.430379747 0.64 79 7 3 115 3L:17899085-17899239 7 67.5 470 FBgn0036770 2001.45 68.62666667 105.7333333 0.033725549 0.98358267 0.638398487 2 1 1.5 0.5 dme-miR-252-5p 7mer-m8 GTACTTA 3L 1851142 1851148 - 3L_1851142_1851148_- 0.5310984 0.45934706 0.49522273 0.050735831 CNMa FBtr0332672|FBtr0303155 1850913|1850913 1851347|1851347 3L - 1851041 1851159 3'utr CNMa FlyBase G33542.1 ACGATTACATTGTACTTATACATAATGTCTCGACTTACACACACTGACACACATCTGATACCCGCTCTCTGCACACCGACATTCACACACACGCACACACCGAAGTATTTCCATATTAG 28 1851149 0.872215485 9 26 176 0.939393939 1.491361694 0.333333333 0.178571429 0.303030303 28 2 0 31 3L:1851041-1851159 7 CNMa FBtr0332672|FBtr0303155 1850913|1850913 1851347|1851347 GTACTTA 7mer-m8 dme-miR-252-5p 3L - 1851082 1851157 3'utr CNMa FlyBase G25365.1 GATTACATTGTACTTATACATAATGTCTCGACTTACACACACTGACACACATCTGATACCCGCTCTCTGCACACCG 15 1851149 0.777190814 7 14 84 0.958333333 1.361727836 0.333333333 0.4 0.625 15 1 0 23 3L:1851082-1851157 7 7 471 FBgn0035282 2.666666667 0.21 0.333333333 2.625 33.33333333 21 1 1 1 0.5 dme-miR-317-5p 7mer-A1 TATCCCA 3L 1858304 1858310 + 3L_1858304_1858310_+ 0.570497022 0.783924472 0.677210747 0.150916033 CG12024 FBtr0072833|FBtr0303152|FBtr0072832 1858183|1858183|1858183 1859047|1859047|1859047 3L + 1858187 1858359 3'utr CG12024 FlyBase G27237.1 CGGATCGTTTTGTTATCTAATCTCAACGGCCATAACGTGACGATCACGTGCGCTAGTAATCTCCCCAGTTCCCCAGTCCAAAGTAATCTCCGGGCAAGAACGAAATCTGAAATCTCCTATCCCAATCTCGACACAAAGATGCGATGGTATTACCCTAGTTTTAACCTTAAGTG 74 1858293 0.840945916 19 68 381 0.925925926 1.875061263 0.135802469 0.094594595 0.172839506 74 6 0 75 3L:1858187-1858359 7 CG12024 FBtr0072832|FBtr0303152|FBtr0072833 1858183|1858183|1858183 1859047|1859047|1859047 TATCCCA 7mer-A1 dme-miR-317-5p 3L + 1858246 1858353 3'utr CG12024 FlyBase G20616.1 TCTCCCCAGTTCCCCAGTCCAAAGTAATCTCCGGGCAAGAACGAAATCTGAAATCTCCTATCCCAATCTCGACACAAAGATGCGATGGTATTACCCTAGTTTTAACCT 37 1858294 0.970700306 8 30 178 0.849056604 1.176091259 0.20754717 0.351351351 0.547169811 37 6 2 45 3L:1858246-1858353 7 23 472 FBgn0035283 210.8633333 14.46 22.18 0.109075388 1.590594744 1.036970243 11 10 10.5 0.5 dme-bantam-3p 8mer-A1 TGATCTCA 3L 1859248 1859255 - 3L_1859248_1859255_- 0.572258556 0.587348367 0.579803461 0.0106701 R FBtr0332671|FBtr0303154|FBtr0072867 1859113|1859113|1859113 1860656|1860656|1860656 3L - 1859212 1859266 3'utr R FlyBase G33545.1 CACAGAGCCTCTGATCTCAGAATCCTGGCAGTCCCGAATTCGCGACGCAGTAGGT 76 1859256 0.708962651 6 70 276 0.867924528 1.361727836 0.08490566 0.263157895 0.471698113 76 11 3 92 3L:1859212-1859266 8 R FBtr0332671|FBtr0072867|FBtr0303154 1859113|1859113|1859113 1860656|1860656|1860656 TGATCTCA 8mer-A1 dme-bantam-3p 3L - 1859212 1859267 3'utr R FlyBase G25367.1 ACACAGAGCCTCTGATCTCAGAATCCTGGCAGTCCCGAATTCGCGACGCAGTAGGT 55 1859255 0.727588916 5 47 201 0.875 1.243038049 0.05 0.309090909 0.525 55 7 3 70 3L:1859212-1859267 8 47 473 FBgn0004636 4610.196667 206.99 319.1866667 0.010194793 0.227064109 0.147249259 1 0 0.5 0.5 dme-miR-317-3p 6mer3-8 TGTGTT 3L 1867575 1867580 + 3L_1867575_1867580_+ 0.969843611 0.97688062 0.973362115 0.00497591 CG12025 FBtr0345381|FBtr0072834|FBtr0332668 1867491|1867491|1867491 1869491|1867863|1868644 3L + 1867491 1867609 stop_codon CG12025 FlyBase G27247.1 AAGCGTAAGCGGACATCTGGACAGTCGAGCTGGTTGATCCATGGACGAAGAGAGTGGGAGAAGCCCCATCTATAAATATAAATCTGTGTTTGTTTATACCCGACCCGTATAAACAACTT 34 1867573 0.989900228 8 29 283 0.88372093 1.579783597 0.186046512 0.205882353 0.372093023 34 5 0 38 3L:1867491-1867609 6 CG12025 FBtr0332668|FBtr0072834|FBtr0345381 1867491|1867491|1867491 1868644|1867863|1869491 TGTGTT 6mer3-8 dme-miR-317-3p 3L + 1867562 1867590 3'utr CG12025 FlyBase G20624.1 ATAAATATAAATCTGTGTTTGTTTATACC 11 1867574 0.746220819 3 6 102 0.611111111 0.740362689 0 0.545454545 0.722222222 11 6 1 11 3L:1867562-1867590 6 15.5 474 FBgn0035285 812.7766667 48.59666667 74.35333333 0.019070429 0.318951917 0.20846409 2 1 1.5 0.5 dme-miR-317-3p 7mer-A1 GTGTTCA 3L 18752045 18752051 - 3L_18752045_18752051_- 0.691308158 0.792512034 0.741910096 0.071561893 ftz-f1 FBtr0304627|FBtr0347045|FBtr0075086|FBtr0075087 18750605|18750605|18751747|18751747 18752745|18752745|18752745|18752745 3L - 18752021 18752092 3'utr ftz-f1 FlyBase G37897.2 GGAAAATCCATACAAAGAAAATGAAAACAAAGCAAATTTAGGTGTTCATGGTATGAATGTATGTGTATATTA 21 18752044 0.982275511 7 19 157 0.956521739 1.342422681 0.130434783 0.095238095 0.173913043 21 1 0 22 3L:18752021-18752092 7 ftz-f1 FBtr0075086|FBtr0075087|FBtr0304627|FBtr0347045 18751747|18751747|18750605|18750605 18752745|18752745|18752745|18752745 GTGTTCA 7mer-A1 dme-miR-317-3p 3L - 18752034 18752067 3'utr ftz-f1 FlyBase G28634.1 AACAAAGCAAATTTAGGTGTTCATGGTATGAATG 11 18752055 0.847236164 3 11 79 1 1.176091259 0 0.272727273 0.466666667 11 0 0 15 3L:18752034-18752067 7 14 475 FBgn0001078 1154.326667 23.85 36.73 0.012128283 0.587002096 0.381159815 -7 4 -1.5 0.5 dme-miR-276a-3p 6mer2-7 GTTCCT 3L 188454 188459 - 3L_188454_188459_- 0.602195281 0.576152514 0.589173898 0.01841504 rno FBtr0305549|FBtr0305548|FBtr0072532 187205|187984|187205 188548|188548|188548 3L - 188440 188505 3'utr rno FlyBase G32810.1 ACTTCGTTCATTCAAGCTTTCGATAATCCCCTCCCTTTGTGATTTGGTTCCTTGCCCTCGCCCCTA 66 188462 0.616170575 12 63 616 0.960526316 1.562292864 0.105263158 0.121212121 0.236842105 66 2 1 73 3L:188440-188505 6 rno FBtr0072532|FBtr0305549|FBtr0305548 187205|187205|187984 188548|188548|188548 GTTCCT 6mer2-7 dme-miR-276a-3p 3L - 188445 188496 3'utr rno FlyBase G24812.1 ATTCAAGCTTTCGATAATCCCCTCCCTTTGTGATTTGGTTCCTTGCCCTCGC 40 188469 0.796783624 8 37 363 0.915254237 1.033423755 0.016949153 0.375 0.576271186 40 1 4 54 3L:188445-188496 6 34.5 476 FBgn0035106 2909.993333 29.82333333 45.86333333 0.011855697 1.156812339 0.752234901 3 10 6.5 0.5 dme-miR-980-3p 6mer3-8 GGCAGC 3L 18878829 18878834 - 3L_18878829_18878834_- 0.59656679 0.587380593 0.591973691 0.006495624 CG3961 FBtr0333712|FBtr0302322|FBtr0075078|FBtr0075077 18878248|18878651|18878248|18878248 18879086|18879086|18879086|18879086 3L - 18878775 18879064 3'utr CG3961 FlyBase G37968.1 AGACATCAACAACGAATCGAACTCAAGAAACTGGGAAGCATTCATTCAAATATGCCTATACCATTTTAAACTGATGATAACAAAGACTACAGATACAGATACGAAAGCGAACTGTCTAATTTTGTAGTATCGTCAATTCTTAGCACGTAAGAGGAGCGCAAGATACACCAGATACAGATACAATACACATAAAATATACACAACTTCAAACTGACAAGGAGAATCCTTTTGGCAGCCGCATTTTTTTATATAATTTAACCGAGAAGCGAACCTTAATTAATATATTAACT 233 18878835 0.966440359 39 217 1163 0.931899642 1.373580663 0.193548387 0.175965665 0.311827957 233 9 10 260 3L:18878775-18879064 6 CG3961 FBtr0075078|FBtr0075077|FBtr0333712|FBtr0302322 18878248|18878248|18878248|18878651 18879086|18879086|18879086|18879086 GGCAGC 6mer3-8 dme-miR-980-3p 3L - 18878821 18878874 3'utr CG3961 FlyBase G28697.1 AAAATATACACAACTTCAAACTGACAAGGAGAATCCTTTTGGCAGCCGCATTTT 54 18878836 0.712718692 8 51 259 0.941176471 1.204119983 0.258823529 0.425925926 0.635294118 54 1 4 80 3L:18878821-18878874 6 58.5 477 FBgn0036821 610.73 21.53333333 32.27333333 0.095787009 2.716718266 1.812642016 1 2 1.5 0.5 dme-miR-1008-3p 7mer-A1 GCTGTGA 3L 18900769 18900775 - 3L_18900769_18900775_- 0.632642173 0.707736036 0.670189105 0.053099335 arx FBtr0075075 18900593 18900900 3L - 18900766 18900789 3'utr arx FlyBase G37998.1 TAAAATTAACATGTGCTGTGAAAC 8 18900778 0.723892102 2 7 43 0.833333333 1 0 0.375 0.583333333 8 2 0 10 3L:18900766-18900789 7 arx FBtr0075075 18900593 18900900 GCTGTGA 7mer-A1 dme-miR-1008-3p 3L - 18900764 18900788 3'utr arx FlyBase G28727.1 AAAATTAACATGTGCTGTGAAACAA 7 18900779 0.703538993 3 7 35 1 1.079181246 0 0.571428571 0.75 7 0 0 12 3L:18900764-18900788 7 7.5 478 FBgn0036826 465.3333333 66.11666667 101.5966667 0.016117479 0.113435846 0.07382132 3 4 3.5 0.5 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 19003843 19003850 - 3L_19003843_19003850_- 0.468665927 0.498162541 0.483414234 0.020857246 nkd FBtr0075039|FBtr0332649|FBtr0332650 19003739|19003739|19003739 19004922|19005670|19004922 3L - 19003826 19003886 3'utr nkd FlyBase G38038.1 AAAAACAAAATGCATTTAACTCTTATTTACATAAAAAAGACTGATTTCCAATTAAACAATA 12 19003842 0.972362984 7 12 66 1 1.204119983 0 0.25 0.4375 12 0 0 16 3L:19003826-19003886 8 nkd FBtr0332649|FBtr0332650|FBtr0075039 19003739|19003739|19003739 19005670|19004922|19004922 AAGACTGA 8mer-A1 dme-miR-14-3p 3L - 19003827 19003869 3'utr nkd FlyBase G28758.1 AACTCTTATTTACATAAAAAAGACTGATTTCCAATTAAACAAT 11 19003842 0.583894125 4 9 64 0.904761905 1.278753601 0.047619048 0.545454545 0.761904762 11 2 0 19 3L:19003827-19003869 8 9.5 479 FBgn0002945 3.333333333 0.083333333 0.136666667 2.85 114 69.51219512 -8 -8 -8 0.5 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 19059690 19059697 - 3L_19059690_19059697_- 0.465094619 0.444890733 0.454992676 0.014286315 CG3797 FBtr0332648 19059398 19060274 3L - 19059676 19059733 3'utr CG3797 FlyBase G38042.1 TTTACAGCTATTTCATTCAATTAATATTTCAATTCAAAGACTGACAACACCTTTCGTA 19 19059701 0.694787016 7 14 130 0.739130435 0.62838893 0 0.210526316 0.347826087 19 3 3 17 3L:19059676-19059733 8 CG3797 FBtr0332648 19059398 19060274 AAGACTGA 8mer-A1 dme-miR-14-3p 3L - 19059671 19059711 3'utr CG3797 FlyBase G28761.1 AATATTTCAATTCAAAGACTGACAACACCTTTCGTATGTTT 23 19059702 0.690026992 5 17 126 0.771428571 0.954242509 0 0.260869565 0.514285714 23 6 2 27 3L:19059671-19059711 8 19.5 480 FBgn0036842 550.5966667 23.31333333 35.34666667 0.035416124 0.836431227 0.551678612 4 5 4.5 0.5 dme-miR-999-3p 6mer2-7 GTTAAC 3L 19099421 19099426 - 3L_19099421_19099426_- 0.583420034 0.896903 0.740161517 0.221665955 Gem2 FBtr0330093|FBtr0075032 19099121|19099121 19099480|19099480 3L - 19099390 19099452 3'utr Gem2 FlyBase G38079.1 AATTTAAGCGCAAATTCGACTATTTTGTTAACTAAAAAGCCAAAAGCTACGCTGGTAATTTTG 14 19099427 0.980144609 8 13 96 0.941176471 0.903089987 0.058823529 0.214285714 0.352941176 14 0 1 16 3L:19099390-19099452 6 Gem2 FBtr0330093|FBtr0075032 19099121|19099121 19099480|19099480 GTTAAC 6mer2-7 dme-miR-999-3p 3L - 19099390 19099447 3'utr Gem2 FlyBase G28787.1 AAGCGCAAATTCGACTATTTTGTTAACTAAAAAGCCAAAAGCTACGCTGGTAATTTTG 14 19099427 0.689386233 8 14 96 1 1.301029996 0.1 0.428571429 0.6 14 0 0 20 3L:19099390-19099447 6 10 481 FBgn0036850 154 17.00333333 26.24666667 0.064935065 0.588119976 0.381000762 1 1 1 0.5 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3L 19257803 19257809 - 3L_19257803_19257809_- 0.735943915 0.749054414 0.742499165 0.009270523 nes FBtr0075021|FBtr0075019 19257410|19257280 19258010|19258010 3L - 19257609 19257837 3'utr nes FlyBase G38092.1 ACTTTGAACATATATATATATTGTCTGCCTAGTCAAGGTGGAGTCATCCCCTAGTATGCAGTGTGGATTTTGGCGATAAGATATTGTTTTATCTTGCCTAAGAACACATTCTCAGTCGTATATATATATATATATATAAACATTATGGAATTGTAAATTGTATAAGAGTATAAACCCGTTGAGTTCATCTAGGAACTAGACAGATCACTCGAGACTATAACGATACACC 58 19257814 0.906058157 26 52 435 0.910447761 1.785329835 0.074626866 0.120689655 0.23880597 58 6 0 61 3L:19257609-19257837 7 nes FBtr0075021|FBtr0075019 19257410|19257280 19258010|19258010 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3L - 19257761 19257826 3'utr nes FlyBase G28800.1 ATATATATATTGTCTGCCTAGTCAAGGTGGAGTCATCCCCTAGTATGCAGTGTGGATTTTGGCGAT 14 19257813 0.979150593 6 13 94 1 1.278753601 0.315789474 0.214285714 0.421052632 14 0 0 19 3L:19257761-19257826 7 19.5 482 FBgn0026630 1182.346667 63.70333333 97.51666667 0.016492625 0.306106431 0.199965818 5 4 4.5 0.5 dme-miR-1008-3p 6mer3-8 AGCTGT 3L 19262646 19262651 - 3L_19262646_19262651_- 0.979535366 0.863776185 0.921655776 0.081854115 Max FBtr0345391|FBtr0075018 19262230|19262524 19262875|19262875 3L - 19262542 19262672 3'utr Max FlyBase G38104.1 CCGATAATCATAATCATCATTAGCTGTAAGCCCAAAATGTAACCCACCCAATCGACCTTAATTTGTATGCGTGCGTCTTTTCTACTTTCAACAAATTGTCACTCTGTGCGCAAAGAATAAAGTAAACTAGT 33 19262653 0.976903271 16 29 215 0.925 1.267171728 0.125 0.181818182 0.325 33 2 1 37 3L:19262542-19262672 6 Max FBtr0345391|FBtr0075018 19262230|19262524 19262875|19262875 AGCTGT 6mer3-8 dme-miR-1008-3p 3L - 19262613 19262672 3'utr Max FlyBase G28808.1 CCGATAATCATAATCATCATTAGCTGTAAGCCCAAAATGTAACCCACCCAATCGACCTTA 13 19262662 0.985424886 3 9 62 0.727272727 0.726998728 0.318181818 0.692307692 0.818181818 13 4 2 16 3L:19262613-19262672 6 12 483 FBgn0017578 482.9933333 60.31 92.42333333 0.024845063 0.198971978 0.129837343 2 11 6.5 0.5 dme-miR-282-5p 6mer3-8 AGAGGC 3L 19591250 19591255 - 3L_19591250_19591255_- 0.795581232 0.522270201 0.658925716 0.193260061 ash1 FBtr0306010|FBtr0306009 19590771|19590771 19591301|19591301 3L - 19591219 19591308 stop_codon ash1 FlyBase G38181.1 AACATAACCGATGTAACGCGAGTAGATTAAGCCGTGTATATACGCCTAAAGTTAGAGGCATTGATTAATATTTATGGAACTTCAATTAAC 24 19591256 0.976446475 8 24 156 1 1.447158031 0.142857143 0.166666667 0.285714286 24 0 0 28 3L:19591219-19591308 6 ash1 FBtr0306010|FBtr0306009 19590771|19590771 19591301|19591301 AGAGGC 6mer3-8 dme-miR-282-5p 3L - 19591243 19591275 3'utr ash1 FlyBase G28858.1 GTGTATATACGCCTAAAGTTAGAGGCATTGATT 12 19591256 0.78400722 5 11 82 0.909090909 1.301029996 0.181818182 0.416666667 0.681818182 12 2 0 20 3L:19591243-19591275 6 15 484 FBgn0005386 720.8833333 11.4 17.44333333 0.020807805 1.315789474 0.859927384 1 1 1 0.5 dme-miR-277-3p 8mer-A1 TGCATTTA 3L 19803083 19803090 + 3L_19803083_19803090_+ 0.584909767 0.599526256 0.592218011 0.010335426 Ir76a FBtr0301606 19802012 19803427 3L + 19803049 19803098 3'utr Ir76a FlyBase G31441.1 AGCGGCTGAAACTTATGGTGGATGATATTTACTTTGCATTTACGGTGGCG 10 19803082 0.753568534 4 10 77 1 1.146128036 0.714285714 0.4 0.571428571 10 0 0 14 3L:19803049-19803098 8 Ir76a FBtr0301606 19802012 19803427 TGCATTTA 8mer-A1 dme-miR-277-3p 3L + 19803041 19803099 3'utr Ir76a FlyBase G23784.1 TGCCCTAAAGCGGCTGAAACTTATGGTGGATGATATTTACTTTGCATTTACGGTGGCGT 7 19803081 0.983702874 4 6 50 1 1 0.4 0.285714286 0.5 7 0 0 10 3L:19803041-19803099 8 5 485 FBgn0260874 218.0066667 15.19666667 23.07666667 0.022935078 0.329019522 0.216669074 1 2 1.5 0.5 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 3L 19810499 19810505 - 3L_19810499_19810505_- 0.41646623 0.40957501 0.41302062 0.004872814 Cyp305a1 FBtr0074925 19810401 19810551 3L - 19810466 19810521 3'utr Cyp305a1 FlyBase G38376.1 TATAGGTCAAGAGATATGGTGCTGAATCCACTAGGATATTTCCAAGGATTCCGAAA 97 19810505 0.962216806 8 96 501 0.991735537 1.77815125 0.074380165 0.206185567 0.363636364 97 0 1 120 3L:19810466-19810521 7 Cyp305a1 FBtr0074925 19810401 19810551 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 3L - 19810465 19810536 3'utr Cyp305a1 FlyBase G28998.1 CGATGGTGTCGGTATTATAGGTCAAGAGATATGGTGCTGAATCCACTAGGATATTTCCAAGGATTCCGAAAA 69 19810505 0.966688779 6 65 351 0.96 1.681241237 0.15 0.333333333 0.54 69 3 1 96 3L:19810465-19810536 7 80 486 FBgn0036910 2.666666667 0.18 0.286666667 30 444.4444444 279.0697674 0 0 0 0.5 dme-miR-283-5p 8mer-A1 TGATATTA 3L 19867555 19867562 - 3L_19867555_19867562_- 0.575609472 0.590015352 0.582812412 0.01018651 Rab8 FBtr0074921 19867486 19868552 3L - 19867542 19867607 3'utr Rab8 FlyBase G38404.1 AGTAATATAAATAATGTGAAATTAAATGATAACTAATTGCATATTTGATATTAATTAATTACTTGT 16 19867563 0.776200893 8 16 139 1 1.322219295 0.047619048 0.1875 0.380952381 16 0 0 21 3L:19867542-19867607 8 Rab8 FBtr0074921 19867486 19868552 TGATATTA 8mer-A1 dme-miR-283-5p 3L - 19867548 19867628 3'utr Rab8 FlyBase G29014.1 TTATGAACACATACACAGCGCAGTAATATAAATAATGTGAAATTAAATGATAACTAATTGCATATTTGATATTAATTAATT 12 19867569 0.986614097 9 11 94 0.9375 1.176091259 0.0625 0.333333333 0.5 12 1 0 15 3L:19867548-19867628 8 4.5 487 FBgn0262518 1251.336667 71.43666667 109.69 0.003596155 0.062992861 0.041024706 1 7 4 0.5 dme-miR-1003-3p 6mer3-8 ATGTGA 3L 19867589 19867594 - 3L_19867589_19867594_- 0.74272794 0.733544918 0.738136429 0.006493362 Rab8 FBtr0074921 19867486 19868552 3L - 19867542 19867607 3'utr Rab8 FlyBase G38404.1 AGTAATATAAATAATGTGAAATTAAATGATAACTAATTGCATATTTGATATTAATTAATTACTTGT 16 19867596 0.776200893 8 16 139 1 1.322219295 0.047619048 0.1875 0.380952381 16 0 0 21 3L:19867542-19867607 6 Rab8 FBtr0074921 19867486 19868552 ATGTGA 6mer3-8 dme-miR-1003-3p 3L - 19867548 19867628 3'utr Rab8 FlyBase G29014.1 TTATGAACACATACACAGCGCAGTAATATAAATAATGTGAAATTAAATGATAACTAATTGCATATTTGATATTAATTAATT 12 19867595 0.986614097 9 11 94 0.9375 1.176091259 0.0625 0.333333333 0.5 12 1 0 15 3L:19867548-19867628 6 8 488 FBgn0262518 1251.336667 71.43666667 109.69 0.006393164 0.111987308 0.072932811 2 1 1.5 0.5 dme-miR-34-5p 8mer-A1 CACTGCCA 3L 19919163 19919170 - 3L_19919163_19919170_- 0.642249141 0.635474245 0.638861693 0.004790578 Su(z)12 FBtr0074916 19918240 19919365 3L - 19919123 19919196 3'utr Su(z)12 FlyBase G38494.2 CAACCGCAACAAAAGCAATAACCATTCACTGCCAGCAACCAGTAACAACGCCAGTAGCAGCAGCAGCAACAGCA 173 19919172 0.999927653 5 171 540 0.979695431 1.586587305 0.020304569 0.10982659 0.218274112 173 0 4 193 3L:19919123-19919196 8 Su(z)12 FBtr0074916 19918240 19919365 CACTGCCA 8mer-A1 dme-miR-34-5p 3L - 19919122 19919195 3'utr Su(z)12 FlyBase G29082.1 AACCGCAACAAAAGCAATAACCATTCACTGCCAGCAACCAGTAACAACGCCAGTAGCAGCAGCAGCAACAGCAA 80 19919172 0.907329834 3 78 240 0.936507937 2.071882007 0 0.3375 0.579365079 80 8 0 118 3L:19919122-19919195 8 123 489 FBgn0020887 388.31 12.01333333 18.55333333 0.31675723 10.23862375 6.629536471 2 2 2 0.5 dme-miR-965-3p 7mer-m8 TACGCTT 3L 19932238 19932244 + 3L_19932238_19932244_+ 0.407284368 0.50451333 0.455898849 0.068751215 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 3L + 19932217 19932276 3'utr RhoGDI FlyBase G31574.1 CACAACTTACAACATACATCATACGCTTTTTGTTTTCCCTCAAACATGCCTTGTAAATGA 53 19932238 0.839527775 8 49 492 0.9375 1.176091259 0.125 0.20754717 0.34375 53 1 3 60 3L:19932217-19932276 7 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 TACGCTT 7mer-m8 dme-miR-965-3p 3L + 19932211 19932272 3'utr RhoGDI FlyBase G23873.1 ACGACACACAACTTACAACATACATCATACGCTTTTTGTTTTCCCTCAAACATGCCTTGTAA 49 19932245 0.923595682 7 42 441 0.882352941 1.77815125 0.235294118 0.367346939 0.544117647 49 8 0 60 3L:19932211-19932272 7 47.5 490 FBgn0036921 5639.993333 451.2133333 691.66 0.008421996 0.105271712 0.068675361 0 -7 -3.5 0.5 dme-miR-277-3p 7mer-m8 TGCATTT 3L 19932641 19932647 + 3L_19932641_19932647_+ 0.441334122 0.312574863 0.376954493 0.091046503 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 3L + 19932629 19932659 3'utr RhoGDI FlyBase G31577.1 AAGAAAGTTGTTTGCATTTCGCTGTGTATTT 8 19932643 0.620224681 2 8 74 1 1 0.6 0.25 0.4 8 0 0 10 3L:19932629-19932659 7 RhoGDI FBtr0074896|FBtr0331800 19932177|19932177 19932930|19932930 TGCATTT 7mer-m8 dme-miR-277-3p 3L + 19932629 19932658 3'utr RhoGDI FlyBase G23876.1 AAGAAAGTTGTTTGCATTTCGCTGTGTATT 8 19932646 0.66493294 4 8 78 1 1.146128036 0.285714286 0.625 0.785714286 8 0 0 14 3L:19932629-19932658 7 8 491 FBgn0036921 5639.993333 451.2133333 691.66 0.001418441 0.017729973 0.011566377 -2 -5 -3.5 0.5 dme-miR-308-3p 8mer-m1 CTGTGATT 3L 19979131 19979138 - 3L_19979131_19979138_- 0.341291358 0.313253448 0.327272403 0.01982586 CG14182 FBtr0074913|FBtr0346534|FBtr0331802 19978811|19978711|19978811 19979187|19979187|19979187 3L - 19979117 19979187 NoAnnotation G38510.1 AGACGTGACCACGGCATCGCTAGATTCCTCATTTCATTTGCAGTTTGCTCTGTGATTTGTTACATCTTTTG 131 19979139 0.810863064 16 124 1446 0.961783439 1.480006943 0.133757962 0.183206107 0.318471338 131 2 4 151 3L:19979117-19979187 8 CG14182 FBtr0331802|FBtr0346534|FBtr0074913 19978811|19978711|19978811 19979187|19979187|19979187 CTGTGATT 8mer-m1 dme-miR-308-3p 3L - 19979117 19979189 stop_codon CG14182 FlyBase G29094.1 AAAGACGTGACCACGGCATCGCTAGATTCCTCATTTCATTTGCAGTTTGCTCTGTGATTTGTTACATCTTTTG 86 19979131 0.992770266 12 80 925 0.946969697 2.096910013 0.075757576 0.465116279 0.651515152 86 7 0 125 3L:19979117-19979189 8 103.5 492 FBgn0036922 39 5.416666667 8.226666667 2.653846154 19.10769231 12.58103728 1 -7 -3 0.5 dme-miR-8-3p 7mer-A1 AGTATTA 3L 20150610 20150616 - 3L_20150610_20150616_- 0.49382289 0.635734338 0.564778614 0.100346513 CG42674 FBtr0302712|FBtr0302713|FBtr0302715|FBtr0302714|FBtr0332699|FBtr0302716|FBtr0332698 20149612|20149612|20149612|20149612|20149612|20149612|20149612 20151571|20151571|20151571|20151571|20151571|20151571|20151571 3L - 20150593 20150642 3'utr CG42674 FlyBase G38527.1 ACGAAAAAGTTTGTATACCAATATAGAGTATTAGCCGATCTTCGGTCAAA 50 20150620 0.86578485 7 40 408 0.806451613 1.397940009 0.258064516 0.18 0.338709677 50 11 1 50 3L:20150593-20150642 7 CG42674 FBtr0302714|FBtr0302715|FBtr0302713|FBtr0302712|FBtr0332698|FBtr0302716|FBtr0332699 20149612|20149612|20149612|20149612|20149612|20149612|20149612 20151571|20151571|20151571|20151571|20151571|20151571|20151571 AGTATTA 7mer-A1 dme-miR-8-3p 3L - 20150595 20150635 3'utr CG42674 FlyBase G29102.2 AGTTTGTATACCAATATAGAGTATTAGCCGATCTTCGGTCA 37 20150620 0.893453878 5 21 265 0.633333333 1.278753601 0.2 0.405405405 0.633333333 37 21 1 38 3L:20150595-20150635 7 42.5 493 FBgn0261556 3405.386667 53.14 81.81333333 0.012480227 0.799774181 0.519475228 4 4 4 0.5 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG 3L 20297348 20297353 - 3L_20297348_20297353_- 0.847018786 0.752291278 0.799655032 0.066982458 Pex23 FBtr0074846 20297127 20297459 3L - 20297298 20297421 3'utr Pex23 FlyBase G38605.1 ACGGACGATCCTGTTTGTTGTATTTATTCATATTTACAAGCTTATATGTGACCATGCCAACGCTTTTTCCAAAGTATATGAAAATAAGATGTTTCCTATTTAAGCTATTTGAAACGTATTATTT 62 20297355 0.985104955 14 59 476 0.960526316 1.562292864 0.184210526 0.177419355 0.328947368 62 2 1 73 3L:20297298-20297421 6 Pex23 FBtr0074846 20297127 20297459 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" 3L - 20297320 20297391 3'utr Pex23 FlyBase G29154.1 TATTTACAAGCTTATATGTGACCATGCCAACGCTTTTTCCAAAGTATATGAAAATAAGATGTTTCCTATTTA 36 20297378 0.980915157 14 32 231 0.842105263 1.681241237 0.105263158 0.444444444 0.649122807 36 9 0 48 3L:20297320-20297391 6 15.5 494 FBgn0052226 261.2133333 7.016666667 10.72666667 0.059338472 2.209026128 1.444996892 2 25 13.5 0.5 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3L 20308852 20308857 + 3L_20308852_20308857_+ 0.72959301 0.967994019 0.848793515 0.168574964 CG6597 FBtr0074837|FBtr0332775|FBtr0074838|FBtr0344228 20308825|20308825|20308825|20308825 20309194|20309511|20309511|20309194 3L + 20308802 20308927 stop_codon CG6597 FlyBase G31674.2 CACCTCCACAACCGGATCTAGCTGAGAAAAGCTGTATCGAGTCGCCTATTTCTAGTTCAACTTTGGGAGCTCAGTGCGGAGAGGAGTTCGCGGAGACTGAGTCGGAGATGGGATGCGATGCGATGG 27 20308852 0.979593359 12 25 167 0.96875 1.491361694 0.4375 0.111111111 0.25 27 1 0 31 3L:20308802-20308927 6 CG6597 FBtr0074838|FBtr0344228|FBtr0074837|FBtr0332775 20308825|20308825|20308825|20308825 20309511|20309194|20309194|20309511 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3L + 20308839 20308909 5'utr CG6597 FlyBase G23948.1 CGAGTCGCCTATTTCTAGTTCAACTTTGGGAGCTCAGTGCGGAGAGGAGTTCGCGGAGACTGAGTCGGAGA 15 20308852 0.984716353 6 13 104 0.92 1.361727836 0.2 0.466666667 0.68 15 2 0 23 3L:20308839-20308909 6 12.5 495 FBgn0036967 626.6566667 51.31333333 78.75333333 0.019947127 0.243601403 0.15872344 0 0 0 0.5 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3L 20382257 20382262 + 3L_20382257_20382262_+ 0.989094046 0.980758923 0.984926485 0.005893806 RhoBTB FBtr0078185|FBtr0330157|FBtr0330158 20381697|20381881|20381697 20382398|20382398|20382398 3L + 20382186 20382292 3'utr RhoBTB FlyBase G31744.2 TTGTTCTGCACGATCCCTCCCATGGAATGTGGACAGCCGAAGGACGCAGACATGTGTATATCCATATATTTGTACCTTTACCTAAGACATGTATGTATGTATATTTT 19 20382265 0.893786405 13 18 165 0.954545455 1.021189299 0.181818182 0.157894737 0.272727273 19 0 1 21 3L:20382186-20382292 6 RhoBTB FBtr0330158|FBtr0078185|FBtr0330157 20381697|20381697|20381881 20382398|20382398|20382398 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3L + 20382247 20382284 3'utr RhoBTB FlyBase G24002.1 CCATATATTTGTACCTTTACCTAAGACATGTATGTATG 10 20382263 0.601295405 4 8 89 0.857142857 0.77815125 0.571428571 0.4 0.571428571 10 1 1 12 3L:20382247-20382284 6 10 496 FBgn0036980 400.9966667 15.65333333 23.82333333 0.024937863 0.638841567 0.419756541 -8 -6 -7 0.5 dme-miR-968-5p 7mer-A1 CTACTTA 3L 20391837 20391843 + 3L_20391837_20391843_+ 0.647320501 0.438284734 0.542802617 0.147810632 fbl FBtr0078189|FBtr0307393|FBtr0078187 20391181|20391181|20391181 20391913|20391913|20391913 3L + 20391786 20391914 3'utr fbl FlyBase G31761.1 TGATGATACAGTTTAAAAACAAGACGGTAATAGCCTTCTCTCTACCTTTGCCTACTTATACAATTATTGTTAAGGTTTGTGTTATTCTAAAAAAATTCCGTAATAAACTAGACACGAGTTGTTCTGATA 32 20391834 0.987834736 12 29 259 0.911111111 1.135662602 0.155555556 0.28125 0.488888889 32 2 2 41 3L:20391786-20391914 7 fbl FBtr0078187|FBtr0307393|FBtr0078189 20391181|20391181|20391181 20391913|20391913|20391913 CTACTTA 7mer-A1 dme-miR-968-5p 3L + 20391797 20391839 3'utr fbl FlyBase G24017.1 TTTAAAAACAAGACGGTAATAGCCTTCTCTCTACCTTTGCCTA 12 20391834 0.986940158 2 11 97 0.941176471 0.903089987 0.058823529 0.25 0.470588235 12 0 1 16 3L:20391797-20391839 3 12.5 497 FBgn0011205 689.3733333 36.86333333 56.25 0.01813241 0.339090334 0.222222222 3 3 3 0.5 dme-miR-1008-3p 7mer-A1 GCTGTGA 3L 20428169 20428175 - 3L_20428169_20428175_- 0.775949793 0.813476081 0.794712937 0.026535101 CG5262 FBtr0078230|FBtr0310615 20428098|20427960 20428352|20428352 3L - 20428141 20428206 3'utr CG5262 FlyBase G38672.1 ATTTTAGCAACGTAAGTCAGTATTGAAATCGGCTGTGACACAAATTTTCAATATATTTTTTATATA 101 20428184 0.969421902 9 92 650 0.920353982 1.539912085 0.10619469 0.118811881 0.212389381 101 7 2 104 3L:20428141-20428206 7 CG5262 FBtr0078230|FBtr0310615 20428098|20427960 20428352|20428352 GCTGTGA 7mer-A1 dme-miR-1008-3p 3L - 20428151 20428213 3'utr CG5262 FlyBase G29203.1 TAATCGAATTTTAGCAACGTAAGTCAGTATTGAAATCGGCTGTGACACAAATTTTCAATATAT 69 20428182 0.673608042 10 59 430 0.845360825 1.135662602 0.257731959 0.31884058 0.515463918 69 10 5 82 3L:20428151-20428213 7 77 498 FBgn0036988 148.2966667 9.42 14.41 0.519229472 8.174097665 5.34351145 9 7 8 0.5 dme-bantam-3p 8mer-A1 TGATCTCA 3L 20743899 20743906 + 3L_20743899_20743906_+ 0.613317116 0.616716403 0.615016759 0.002403668 CG13252 FBtr0078245 20743657 20744508 3L + 20743879 20743927 3'utr CG13252 FlyBase G31851.1 TGCCTTTATTTGTTTGGTATTGATCTCATTTAAACTTTTCACTCTTCAC 98 20743898 0.623514127 15 96 1093 0.983870968 1.785329835 0 0.214285714 0.379032258 98 1 1 122 3L:20743879-20743927 8 CG13252 FBtr0078245 20743657 20744508 TGATCTCA 8mer-A1 dme-bantam-3p 3L + 20743882 20743917 3'utr CG13252 FlyBase G24078.1 CTTTATTTGTTTGGTATTGATCTCATTTAAACTTTT 68 20743898 0.624469351 9 65 742 0.96875 1.491361694 0 0.294117647 0.5 68 1 2 93 3L:20743882-20743917 8 82.5 499 FBgn0037016 248.3333333 12.01 18.50666667 0.332214765 6.869275604 4.457853026 1 1 1 0.5 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 20768379 20768386 - 3L_20768379_20768386_- 0.486359744 0.494724877 0.49054231 0.00591509 CG4074 FBtr0345811|FBtr0078280 20768205|20768340 20768406|20768406 3L - 20768362 20768405 3'utr CG4074 FlyBase G38739.1 CAAATAAACTTTCCAATATGGCAGCTATTTTATGAACATAAAAG 51 20768388 0.872123206 5 51 442 1 1.799340549 0 0.137254902 0.301587302 51 0 0 63 3L:20768362-20768405 8 CG4074 FBtr0345811|FBtr0078280 20768205|20768340 20768406|20768406 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L - 20768360 20768404 3'utr CG4074 FlyBase G29248.1 AAATAAACTTTCCAATATGGCAGCTATTTTATGAACATAAAAGTT 28 20768387 0.979479987 4 25 256 0.888888889 1.204119983 0 0.285714286 0.444444444 28 3 1 32 3L:20768360-20768404 8 39.5 500 FBgn0037017 21.33333333 2.336666667 3.576666667 1.8515625 16.90442225 11.04380242 2 1 1.5 0.5 dme-miR-31a-5p 6mer3-8 TCTTGC 3L 20839197 20839202 - 3L_20839197_20839202_- 0.573133087 0.894167276 0.733650182 0.22700546 CSN3 FBtr0078269 20839094 20839324 3L - 20839187 20839266 3'utr CSN3 FlyBase G38791.1 ATCCCCAACACCGTTTACCAGAACTTGTCGAAGCCGCGAGGCCCTGGGCCCGAAAGCTGACGTCTCTTGCAGTCCGTACT 8 20839200 0.964220181 6 8 42 1 0.903089987 0 0 0 8 0 0 8 3L:20839187-20839266 6 CSN3 FBtr0078269 20839094 20839324 TCTTGC 6mer3-8 dme-miR-31a-5p 3L - 20839185 20839237 3'utr CSN3 FlyBase G29290.1 GAAGCCGCGAGGCCCTGGGCCCGAAAGCTGACGTCTCTTGCAGTCCGTACTCA 6 20839209 0.914893565 3 5 19 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 3L:20839185-20839237 6 4 501 FBgn0027055 526.47 38.38666667 58.78666667 0.007597774 0.104202848 0.06804264 -2 7 2.5 0.5 dme-miR-305-5p 7mer-A1 GTACAAA 3L 20994476 20994482 - 3L_20994476_20994482_- 0.772315717 0.588812138 0.680563928 0.12975664 skd FBtr0078328|FBtr0112830|FBtr0078329|FBtr0333284 20994129|20994129|20992812|20994129 20995703|20995703|20995703|20995703 3L - 20994463 20994526 3'utr skd FlyBase G38807.1 CACATAGCCAATTTTCTAATAATGGAATACTTAAACGAAAATGTGTACAAATTAATAATAACGA 8 20994485 0.982249178 5 7 57 0.888888889 0.602059991 0.333333333 0.125 0.222222222 8 0 1 8 3L:20994463-20994526 7 skd FBtr0078329|FBtr0333284|FBtr0078328|FBtr0112830 20992812|20994129|20994129|20994129 20995703|20995703|20995703|20995703 GTACAAA 7mer-A1 dme-miR-305-5p 3L - 20994465 20994498 3'utr skd FlyBase G29300.1 ACTTAAACGAAAATGTGTACAAATTAATAATAAC 8 20994485 0.958967905 2 8 41 1 1.041392685 0 0.375 0.545454545 8 0 0 11 3L:20994465-20994498 7 6.5 502 FBgn0003415 2022.95 23.24 35.72666667 0.003213129 0.279690189 0.181936929 3 3 3 0.5 dme-miR-307a-3p 7mer-A1 GTTGTGA 3L 21271302 21271308 - 3L_21271302_21271308_- 0.760580155 0.765051725 0.76281594 0.003161828 AcCoAS FBtr0333126|FBtr0078413|FBtr0078414 21271207|21270720|21271207 21271704|21271704|21271704 3L - 21271274 21271342 3'utr AcCoAS FlyBase G38885.1 TCGTTGTAGTCGTAGTTTAAGTTCTCGCTAATTCGTTGTGATACAAATTTAATTATATCTTACTTATGT 255 21271309 0.736483011 18 230 2338 0.903846154 1.274157849 0.480769231 0.173228346 0.326923077 254 16 14 282 3L:21271274-21271342 7 AcCoAS FBtr0078413|FBtr0078414|FBtr0333126 21270720|21271207|21271207 21271704|21271704|21271704 GTTGTGA 7mer-A1 dme-miR-307a-3p 3L - 21271270 21271341 3'utr AcCoAS FlyBase G29358.1 CGTTGTAGTCGTAGTTTAAGTTCTCGCTAATTCGTTGTGATACAAATTTAATTATATCTTACTTATGTATGT 154 21271308 0.691948948 16 136 1388 0.887029289 1.627365857 0.464435146 0.376623377 0.59832636 154 23 4 212 3L:21271270-21271341 7 191.5 503 FBgn0012034 1039.716667 45.38666667 69.30333333 0.184184794 4.219300823 2.763214853 1 0 0.5 0.5 dme-miR-1012-3p 6mer3-8 TTGACT 3L 21280652 21280657 - 3L_21280652_21280657_- 0.893755864 0.645286864 0.769521364 0.175694115 ppl FBtr0078412 21280489 21280688 3L - 21280624 21280742 stop_codon ppl FlyBase G38901.1 CTTATGACCGAGGATCAGTACAAAGCCTTCCTGAGCAGCAGTGGGGATCACTAGAACCAGCAGCTAATCCTAACCCTAAAGCATCTTGACTGTAGCCTTTAAAACGAGTAATTGTTAGC 33 21280650 0.971040779 9 31 183 0.918918919 1.054357662 0.054054054 0.090909091 0.189189189 33 1 2 34 3L:21280624-21280742 6 ppl FBtr0078412 21280489 21280688 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 21280638 21280670 3'utr ppl FlyBase G29373.1 ACCCTAAAGCATCTTGACTGTAGCCTTTAAAAC 15 21280656 0.634234328 3 15 92 1 1.380211242 0 0.466666667 0.666666667 15 0 0 24 3L:21280638-21280670 6 17 504 FBgn0027945 285 39.5 59.95666667 0.059649123 0.430379747 0.283538111 -7 -1 -4 0.5 dme-miR-282-5p 6mer2-7 GAGGCT 3L 21439311 21439316 - 3L_21439311_21439316_- 0.977468796 0.632627123 0.805047959 0.243839905 CG5664 FBtr0331822 21438626 21439731 3L - 21439292 21439388 3'utr CG5664 FlyBase G38954.1 AGTTGTCGCGTGAGGATTACCTAGCATTACTCCTTAGCGCCTTAAAAGACTATGACAAGTGGTTAAATCTTGGAGGCTTTTGGAAGTACCTAATGAG 16 21439318 0.987719868 7 15 129 0.952380952 1.301029996 0.285714286 0.3125 0.476190476 16 1 0 20 3L:21439292-21439388 6 CG5664 FBtr0331822 21438626 21439731 GAGGCT 6mer2-7 dme-miR-282-5p 3L - 21439300 21439332 3'utr CG5664 FlyBase G29422.1 AAGTGGTTAAATCTTGGAGGCTTTTGGAAGTAC 7 21439318 0.770065742 3 7 61 1 1.079181246 0.083333333 0.428571429 0.666666667 7 0 0 12 3L:21439300-21439332 6 9 505 FBgn0037082 240.3466667 11.07666667 16.92666667 0.037445911 0.812518808 0.531705396 2 2 2 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3L 21439663 21439670 - 3L_21439663_21439670_- 0.634176941 0.577211618 0.60569428 0.04028055 CG5664 FBtr0331822|FBtr0331822|FBtr0331822 21438626|21438626|21438626 21439731|21439731|21439731 3L - 21439608 21439685 3'utr CG5664 FlyBase G38955.1 AGTACGAGGATAATGCTGTGATATATCCTAGTATGGGACCCCAAACCCATCTGCTCATCGAAGACTTCTTCAAGATTT 17 21439672 0.980565538 8 16 114 0.947368421 1.255272505 0.263157895 0.117647059 0.210526316 17 1 0 18 3L:21439608-21439685 8 CG5664 FBtr0331822|FBtr0331822|FBtr0331822 21438626|21438626|21438626 21439731|21439731|21439731 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 21439646 21439690 3'utr CG5664 FlyBase G29423.1 GCTAAAGTACGAGGATAATGCTGTGATATATCCTAGTATGGGACC 10 21439673 0.986967979 3 8 73 0.8 1.079181246 0.4 0.3 0.533333333 10 3 0 12 3L:21439646-21439690 8 11.5 506 FBgn0037082 240.3466667 11.07666667 16.92666667 0.047847554 1.038218477 0.679401339 2 3 2.5 0.5 dme-miR-14-3p 7mer-A1 AGACTGA 3L 21531075 21531081 - 3L_21531075_21531081_- 0.65762128 0.772087049 0.714854164 0.080939473 Mkrn1 FBtr0305331|FBtr0078384|FBtr0078383 21530604|21530604|21529957 21531468|21531468|21531468 3L - 21531056 21531116 3'utr Mkrn1 FlyBase G39021.1 ATTTTCAAAACTGGTGACTGTAAATTATGGCTTTCAGACTGAATTGTAAAGATAAAAATGC 102 21531084 0.707398048 9 99 751 0.976 1.785329835 0.04 0.18627451 0.336 102 2 1 122 3L:21531056-21531116 7 Mkrn1 FBtr0078383|FBtr0078384|FBtr0305331 21529957|21530604|21530604 21531468|21531468|21531468 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 21531059 21531110 3'utr Mkrn1 FlyBase G29466.1 AAAACTGGTGACTGTAAATTATGGCTTTCAGACTGAATTGTAAAGATAAAAA 87 21531084 0.636788534 11 84 633 0.947826087 1.736396502 0.07826087 0.252873563 0.434782609 87 5 1 109 3L:21531059-21531110 7 89 507 FBgn0029152 1179.853333 63.02 97.17333333 0.075433105 1.412250079 0.915889133 3 3 3 0.5 dme-miR-11-3p 8mer-m1 CTGTGATG 3L 216363 216370 + 3L_216363_216370_+ 0.440373817 0.407831224 0.42410252 0.023011093 CG16940 FBtr0072486|FBtr0072487 216108|216108 216479|216479 3L + 216317 216385 3'utr CG16940 FlyBase G26717.1 TGAACCACATTGTGGGTCCGAGCTTTATGCTTGACAAAAATTGACTCTGTGATGCTTCCTTTTTCGGTT 25 216362 0.890948911 9 21 195 0.903225806 1.447158031 0.129032258 0.24 0.387096774 25 3 0 28 3L:216317-216385 8 CG16940 FBtr0072487|FBtr0072486 216108|216108 216479|216479 CTGTGATG 8mer-m1 dme-miR-11-3p 3L + 216320 216391 3'utr CG16940 FlyBase G20203.1 ACCACATTGTGGGTCCGAGCTTTATGCTTGACAAAAATTGACTCTGTGATGCTTCCTTTTTCGGTTTGCATA 28 216361 0.968264553 12 27 221 1 1.591064607 0.102564103 0.333333333 0.538461538 27 0 0 39 3L:216320-216391 8 21 508 FBgn0035111 907.85 30.83666667 47.24666667 0.023131575 0.681007459 0.444475801 1 2 1.5 0.5 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 21683107 21683113 + 3L_21683107_21683113_+ 0.401348638 0.432284009 0.416816323 0.021874631 CG11248 FBtr0078430|FBtr0333967|FBtr0078431 21682915|21682915|21682915 21683231|21683231|21683231 3L + 21683060 21683127 3'utr CG11248 FlyBase G32194.1 AGATCCAACTTAGTTCAATTTATATAAATATTTATTTTGTTGTCTTTTGTGTTCGTTATCTTTATTTA 19 21683106 0.879119069 2 19 281 1 1.380211242 0 0.157894737 0.333333333 19 0 0 24 3L:21683060-21683127 7 CG11248 FBtr0078431|FBtr0333967|FBtr0078430 21682915|21682915|21682915 21683231|21683231|21683231 TGTGTTC 7mer-m8 dme-miR-317-3p 3L + 21683093 21683126 3'utr CG11248 FlyBase G24341.1 ATTTTGTTGTCTTTTGTGTTCGTTATCTTTATTT 11 21683106 0.729967988 2 11 156 1 1.204119983 0 0.272727273 0.5 11 0 0 16 3L:21683093-21683126 7 13.5 509 FBgn0037117 323.0366667 13.05333333 20.00333333 0.041790922 1.03421859 0.674887519 1 1 1 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 21824146 21824151 + 3L_21824146_21824151_+ 0.910921786 0.926719783 0.918820784 0.011170873 CG7407 FBtr0078440|FBtr0078440|FBtr0078440 21824099|21824099|21824099 21824571|21824571|21824571 3L + 21824034 21824244 stop_codon CG7407 FlyBase G32205.1 GGAATTGAACCTCCAGGACCGAATAAGCGACCAGGATCTCAAGCAGCAGGTGCGGCTCTATCGCTGAAGTGGCGCCGAGCCTGGGCTCACCCTACCTGAATGTACAGACTTGTGTGATCTATTAGTTTAATGTTTAAAATTCCAAGATTTGGTGTTGCCTCATACGGTCCACTAAGTGCGGGCAAGTCTTTAGTCAGAGAGCTATCTCATC 258 21824145 0.999997264 26 248 2332 0.963815789 1.767897616 0.217105263 0.158914729 0.286184211 258 7 4 293 3L:21824034-21824244 6 CG7407 FBtr0078440|FBtr0078440|FBtr0078440 21824099|21824099|21824099 21824571|21824571|21824571 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 21824037 21824169 stop_codon CG7407 FlyBase G24348.1 ATTGAACCTCCAGGACCGAATAAGCGACCAGGATCTCAAGCAGCAGGTGCGGCTCTATCGCTGAAGTGGCGCCGAGCCTGGGCTCACCCTACCTGAATGTACAGACTTGTGTGATCTATTAGTTTAATGTTTA 129 21824145 0.988546648 16 121 1145 0.938547486 1.924279286 0.173184358 0.286821705 0.48603352 129 10 1 168 3L:21824037-21824169 6 139.5 510 FBgn0037134 80.66666667 9.62 14.74333333 1.729338843 14.5010395 9.461903685 1 1 1 0.5 dme-miR-308-3p 7mer-m1 TGTGATT 3L 21827734 21827740 + 3L_21827734_21827740_+ 0.45465234 0.477567388 0.466109864 0.016203423 CG7414 FBtr0303247|FBtr0303245|FBtr0078441|FBtr0303246 21826936|21826936|21827526|21827526 21827856|21827856|21827856|21827856 3L + 21827711 21827764 3'utr CG7414 FlyBase G32227.1 AAGTTAAAACATTTTTCTACTATTGTGATTTCCCAACTAATTTCGGCAAAACGT 194 21827740 0.734981933 9 190 1861 0.984 2.089905111 0.004 0.25257732 0.42 194 3 1 246 3L:21827711-21827764 7 CG7414 FBtr0078441|FBtr0303246|FBtr0303247|FBtr0303245 21827526|21827526|21826936|21826936 21827856|21827856|21827856|21827856 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 21827712 21827777 3'utr CG7414 FlyBase G24367.1 AGTTAAAACATTTTTCTACTATTGTGATTTCCCAACTAATTTCGGCAAAACGTACAGTAACTCCCG 138 21827740 0.729529215 8 131 1324 0.955 1.37794338 0.015 0.362318841 0.56 138 2 7 191 3L:21827712-21827777 7 163.5 511 FBgn0037135 1558.176667 79.32666667 121.5733333 0.104930335 2.061097571 1.344867295 -6 -6 -6 0.5 dme-miR-14-3p 7mer-A1 AGACTGA 3L 21926166 21926172 + 3L_21926166_21926172_+ 0.754985009 0.806814726 0.780899867 0.036649132 mub FBtr0346820|FBtr0078468|FBtr0333222|FBtr0332736|FBtr0304981|FBtr0304982|FBtr0078470|FBtr0111017 21925263|21925263|21925263|21925263|21925263|21925263|21925263|21923187 21932702|21926699|21932702|21926225|21926699|21926699|21932702|21932702 3L + 21926125 21926199 3'utr mub FlyBase G32257.1 AATTGTTATCGAAATTGTATTTGTGATTTTTGAATATGTTTAGACTGATGTGCAAAATTGATTCTGTTTATTAAT 74 21926164 0.72437265 13 73 763 0.99 1.995635195 0.45 0.297297297 0.48 74 1 0 99 3L:21926125-21926199 7 mub FBtr0111017|FBtr0304982|FBtr0346820|FBtr0304981|FBtr0078468|FBtr0078470|FBtr0333222|FBtr0332736 21923187|21925263|21925263|21925263|21925263|21925263|21925263|21925263 21932702|21926699|21932702|21926699|21926699|21932702|21932702|21926225 AGACTGA 7mer-A1 dme-miR-14-3p 3L + 21926127 21926200 3'utr mub FlyBase G24387.1 TTGTTATCGAAATTGTATTTGTGATTTTTGAATATGTTTAGACTGATGTGCAAAATTGATTCTGTTTATTAATT 58 21926164 0.720590759 13 53 594 0.884057971 1.785329835 0.608695652 0.189655172 0.31884058 58 8 0 61 3L:21926127-21926200 7 35.5 512 FBgn0262737 2368.09 79.81333333 123.0033333 0.014990984 0.444787838 0.288610065 2 2 2 0.5 dme-miR-1012-3p 6mer3-8 TTGACT 3L 22075151 22075156 - 3L_22075151_22075156_- 0.989308139 0.952567918 0.970938028 0.025979245 CG7130 FBtr0078484 22075054 22075247 3L - 22075117 22075220 3'utr CG7130 FlyBase G39167.1 AATCTCGGGTACCTAGCGTTCTTCGCTGAATAGTCTTTAAGATTAATTTATAGGAACTTAATTATTGACTGTTTATCTAATGAATCCTGCGTTACTTATTGATT 73 22075158 0.686629901 23 69 696 0.952941176 1.306425028 0.105882353 0.150684932 0.270588235 73 1 3 81 3L:22075117-22075220 6 CG7130 FBtr0078484 22075054 22075247 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 22075113 22075172 3'utr CG7130 FlyBase G29575.1 TATAGGAACTTAATTATTGACTGTTTATCTAATGAATCCTGCGTTACTTATTGATTAATT 50 22075157 0.710011617 13 49 471 0.959459459 1.851258349 0.094594595 0.38 0.581081081 50 3 0 71 3L:22075113-22075172 6 39 513 FBgn0037151 176 32.25666667 49.12666667 0.221590909 1.209052392 0.793866196 2 1 1.5 0.5 dme-miR-184-5p 6mer3-8 TGATAA 3L 225565 225570 + 3L_225565_225570_+ 0.611300335 0.504645534 0.557972934 0.075416332 CG33229 FBtr0072499|FBtr0345592 224756|224756 225605|225605 3L + 225444 225577 3'utr CG33229 FlyBase G26725.1 ACGGTTCATATTGAATCACTAGCGCTAGAAAACGGGCAATATTGCAAAGTAAACGAGTGAAAGTCGAAAACCCAACTATTAACTGTAAATGTACTTAAAGTAAGCATACAGAACTGATATTTGATAAAACCTAA 296 225562 0.975595691 19 279 1766 0.940860215 2.06694679 0.129032258 0.202702703 0.365591398 296 20 2 350 3L:225444-225577 6 CG33229 FBtr0345592|FBtr0072499 224756|224756 225605|225605 TGATAA 6mer3-8 dme-miR-184-5p 3L + 225446 225582 3'utr CG33229 FlyBase G20211.1 GGTTCATATTGAATCACTAGCGCTAGAAAACGGGCAATATTGCAAAGTAAACGAGTGAAAGTCGAAAACCCAACTATTAACTGTAAATGTACTTAAAGTAAGCATACAGAACTGATATTTGATAAAACCTAAAATAA 212 225561 0.973680409 18 201 1220 0.942073171 1.790988475 0.057926829 0.386792453 0.603658537 212 15 4 309 3L:225446-225582 6 99.5 514 FBgn0053229 390.9566667 32.02 49 0.254503909 3.107432854 2.030612245 3 4 3.5 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 2259195 2259201 - 3L_2259195_2259201_- 0.684322004 0.627188675 0.65575534 0.040399344 oxt FBtr0072904|FBtr0072904|FBtr0072904 2258837|2258837|2258837 2259328|2259328|2259328 3L - 2259133 2259220 3'utr oxt FlyBase G33658.1 ATGTTTTCGTATAGATTGTTGTGATAATGTGAACTTTTAAGCGCCATTTTGACCGGAAGCGGAACTCCGCCGCTCCAATTGTATTTGA 61 2259204 0.98681453 15 56 527 0.927536232 1.329058719 0.31884058 0.098360656 0.202898551 61 3 2 64 3L:2259133-2259220 7 oxt FBtr0072904|FBtr0072904|FBtr0072904 2258837|2258837|2258837 2259328|2259328|2259328 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 2259151 2259223 3'utr oxt FlyBase G25452.1 TCGATGTTTTCGTATAGATTGTTGTGATAATGTGAACTTTTAAGCGCCATTTTGACCGGAAGCGGAACTCCGC 30 2259204 0.987907542 10 28 248 0.93877551 1.662757832 0.346938776 0.4 0.632653061 30 3 0 46 3L:2259151-2259223 7 30 515 FBgn0015360 414.5533333 14.81333333 22.68333333 0.072367046 2.02520252 1.322556943 3 3 3 0.5 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 22747952 22747958 + 3L_22747952_22747958_+ 0.436301932 0.454629486 0.445465709 0.01295957 CG7369 FBtr0078530 22747716 22748614 3L + 22747938 22747969 3'utr CG7369 FlyBase G32401.1 ATTTCCGTTATCTTTGTGTTCCTGTTCCAAAT 77 22747951 0.707693543 6 76 831 0.99122807 2.053078443 0.105263158 0.38961039 0.587719298 77 1 0 113 3L:22747938-22747969 7 CG7369 FBtr0078530 22747716 22748614 TGTGTTC 7mer-m8 dme-miR-317-3p 3L + 22747938 22747972 3'utr CG7369 FlyBase G24485.1 ATTTCCGTTATCTTTGTGTTCCTGTTCCAAATTTG 62 22747951 0.707773385 6 61 674 1 1.995635195 0.181818182 0.435483871 0.646464646 62 0 0 99 3L:22747938-22747972 7 69 516 FBgn0037188 267.3333333 8.483333333 12.97666667 0.258104738 8.133595285 5.317236065 1 1 1 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 22785085 22785091 + 3L_22785085_22785091_+ 0.595653229 0.597049393 0.596351311 0.000987262 SPoCk FBtr0306600|FBtr0306600|FBtr0306600|FBtr0113437|FBtr0113437|FBtr0113437|FBtr0078531|FBtr0078531|FBtr0078531|FBtr0078532|FBtr0078532|FBtr0078532|FBtr0332105|FBtr0332105|FBtr0332105|FBtr0302134|FBtr0302134|FBtr0302134 22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486 22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235 3L + 22784943 22785114 3'utr SPoCk FlyBase G32424.1 TACAATGGGCTGCAAAGCTTTTTTTATTTAACTTTTATTTTCATTTTATCTCTAAGTGCTTCTCTAGTTTCTAATGCTCACCGCGCAATTTGAGTCAATATGAAGTGTTTAATAATCTACAATGTCGGCAAAAACTGTTTAATGTGATATTATTTTAAGCACATAAACCAGA 198 22785081 0.991691345 22 184 2018 0.940677966 1.568201724 0.084745763 0.151515152 0.288135593 198 9 5 222 3L:22784943-22785114 7 SPoCk FBtr0302134|FBtr0302134|FBtr0302134|FBtr0332105|FBtr0332105|FBtr0332105|FBtr0078532|FBtr0078532|FBtr0078532|FBtr0078531|FBtr0078531|FBtr0078531|FBtr0113437|FBtr0113437|FBtr0113437|FBtr0306600|FBtr0306600|FBtr0306600 22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486|22784486 22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235|22785235 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 22785056 22785115 3'utr SPoCk FlyBase G24498.2 AATCTACAATGTCGGCAAAAACTGTTTAATGTGATATTATTTTAAGCACATAAACCAGAT 107 22785081 0.719970686 11 96 1054 0.89261745 1.220761654 0.067114094 0.289719626 0.489932886 107 9 7 133 3L:22785056-22785115 7 135.5 517 FBgn0052451 1200.69 35.10333333 53.84666667 0.112851777 3.860032286 2.516404606 4 4 4 0.5 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 22786246 22786253 + 3L_22786246_22786253_+ 0.649913841 0.656152985 0.653033413 0.004411781 SPoCk FBtr0078533 22784486 22787631 3L + 22786198 22786275 3'utr SPoCk FlyBase G32425.1 GCTCACTCTGTCCGTCCGTATGTCTATCCGTATAAATGTAGAAATCTTGGCAGCTATAAAAGCTAGAGGTTAGGCATG 32 22786245 0.981636243 7 27 200 0.828571429 0.985276743 0.228571429 0.09375 0.171428571 32 4 2 29 3L:22786198-22786275 8 SPoCk FBtr0078533 22784486 22787631 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L + 22786197 22786272 3'utr SPoCk FlyBase G24500.1 TGCTCACTCTGTCCGTCCGTATGTCTATCCGTATAAATGTAGAAATCTTGGCAGCTATAAAAGCTAGAGGTTAGGC 19 22786245 0.973504655 4 19 119 1 1.477121255 0.433333333 0.526315789 0.7 19 0 0 30 3L:22786197-22786272 8 24.5 518 FBgn0052451 1200.69 35.10333333 53.84666667 0.020404934 0.697939417 0.454995667 1 1 1 0.5 dme-miR-33-5p 7mer-A1 AATGCAA 3L 22796093 22796099 - 3L_22796093_22796099_- 0.527821382 0.569086619 0.548454 0.029178903 jim FBtr0078582|FBtr0333212|FBtr0100184|FBtr0330076|FBtr0333213|FBtr0333211|FBtr0304985 22789231|22795975|22795975|22795975|22795975|22795975|22789231 22797911|22797911|22797911|22797557|22797911|22797911|22797911 3L - 22796046 22796107 5'utr jim FlyBase G39342.1 AAGTTTCTAATGCAATCAAAGTAAGTGCTCCGAATACGGTTTGTTTTCACTGTTTTAAATTT 22 22796085 0.879169256 10 21 180 0.931034483 1.431363764 0.275862069 0.272727273 0.448275862 22 2 0 27 3L:22796046-22796107 7 jim FBtr0333211|FBtr0304985|FBtr0330076|FBtr0333213|FBtr0100184|FBtr0078582|FBtr0333212 22795975|22789231|22795975|22795975|22795975|22789231|22795975 22797911|22797911|22797557|22797911|22797911|22797911|22797911 AATGCAA 7mer-A1 dme-miR-33-5p 3L - 22796010 22796107 5'utr jim FlyBase G29718.1 AAGTTTCTAATGCAATCAAAGTAAGTGCTCCGAATACGGTTTGTTTTCACTGTTTTAAATTTAAAGTTTATGAATTATGTTTGGATATTTTATTTAAA 14 22796082 0.985388586 11 12 115 0.909090909 1 0.045454545 0.5 0.681818182 14 1 1 20 3L:22796010-22796107 7 6.5 519 FBgn0027339 2455.313333 43.04666667 66.12 0.00264732 0.150998916 0.09830611 -14 -17 -15.5 0.5 dme-miR-283-5p 8mer-m1 TGATATTT 3L 22796248 22796255 - 3L_22796248_22796255_- 0.317315643 0.520863625 0.419089634 0.143930171 jim FBtr0078582|FBtr0333212|FBtr0100184|FBtr0330076|FBtr0333213|FBtr0333211|FBtr0304985 22789231|22795975|22795975|22795975|22795975|22795975|22789231 22797911|22797911|22797911|22797557|22797911|22797911|22797911 3L - 22796176 22796348 5'utr jim FlyBase G39344.1 AGTTCTTCCCCTGCCAACTGTGTGGATATAATCGACAAATTTAGTTTCTTAACAAATTTTCCAATGTACCGTCAAAGCATTTATAACTGTTATTGATATTTTAGAATATGTTTCCTAAAAAGTATACATATTTTATGTATATGTAGAAAACACCGTGGAAGATAAGAAATTAT 75 22796284 0.99043153 22 68 691 0.914634146 1.176091259 0.024390244 0.093333333 0.170731707 75 3 4 75 3L:22796176-22796348 8 jim FBtr0333211|FBtr0304985|FBtr0330076|FBtr0333213|FBtr0100184|FBtr0078582|FBtr0333212 22795975|22789231|22795975|22795975|22795975|22789231|22795975 22797911|22797911|22797557|22797911|22797911|22797911|22797911 TGATATTT 8mer-m1 dme-miR-283-5p 3L - 22796212 22796357 5'utr jim FlyBase G29720.1 CACCATCTAAGTTCTTCCCCTGCCAACTGTGTGGATATAATCGACAAATTTAGTTTCTTAACAAATTTTCCAATGTACCGTCAAAGCATTTATAACTGTTATTGATATTTTAGAATATGTTTCCTAAAAAGTATACATATTTTATG 62 22796284 0.991149783 21 51 548 0.831168831 1.204119983 0.064935065 0.209677419 0.363636364 62 10 3 64 3L:22796212-22796357 8 27 520 FBgn0027339 2455.313333 43.04666667 66.12 0.01099656 0.627226266 0.408348457 29 29 29 0.5 dme-miR-7-5p 7mer-m8 GTCTTCC 3L 22796627 22796633 - 3L_22796627_22796633_- 0.501349811 0.62417583 0.56276282 0.086851098 jim FBtr0078582|FBtr0333212|FBtr0100184|FBtr0330076|FBtr0333213|FBtr0333211|FBtr0304985 22789231|22795975|22795975|22795975|22795975|22795975|22789231 22797911|22797911|22797911|22797557|22797911|22797911|22797911 3L - 22796595 22796671 5'utr jim FlyBase G39345.1 ATGAAACCTTAAGTACATTGACTTAGGATTCATTTGTTGTCTTCCCCAACTAATTATGTGTAATTTATGTTGAGTTT 37 22796634 0.989463104 9 36 350 0.956521739 1.643452676 0.086956522 0.216216216 0.369565217 37 2 0 44 3L:22796595-22796671 7 jim FBtr0333211|FBtr0304985|FBtr0330076|FBtr0333213|FBtr0100184|FBtr0078582|FBtr0333212 22795975|22789231|22795975|22795975|22795975|22789231|22795975 22797911|22797911|22797557|22797911|22797911|22797911|22797911 GTCTTCC 7mer-m8 dme-miR-7-5p 3L - 22796618 22796664 5'utr jim FlyBase G29721.1 CTTAAGTACATTGACTTAGGATTCATTTGTTGTCTTCCCCAACTAAT 22 22796634 0.647549083 8 21 194 0.931034483 0.954242509 0.068965517 0.272727273 0.448275862 22 0 2 27 3L:22796618-22796664 7 22 521 FBgn0027339 2455.313333 43.04666667 66.12 0.00896016 0.511073254 0.332728373 1 1 1 0.5 dme-miR-980-3p 8mer-A1 GGCAGCTA 3L 22796997 22797004 - 3L_22796997_22797004_- 0.645542371 0.666789622 0.656165996 0.015024039 jim FBtr0078582|FBtr0333212|FBtr0100184|FBtr0330076|FBtr0333213|FBtr0333211|FBtr0304985 22789231|22795975|22795975|22795975|22795975|22795975|22789231 22797911|22797911|22797911|22797557|22797911|22797911|22797911 3L - 22796888 22797086 5'utr jim FlyBase G39347.1 AATTAATCGAGGATATACCACTTAGGCGTAATACTAGGATAGCTCCGATACAATGAGTATGAACATGTGACGTGATAGATAGGGCAGCTATTTGTGGCGAAGGCAGAAGGGGCAGAGCAAAAGGTTGATGGCAAAGAATAGGATGGGGAACGCAGACGTTGGCGCTGAGTAATTTGATTTTTGAAGCAGCATCAAAATT 194 22796995 0.956738101 29 175 1173 0.902542373 1.851258349 0.419491525 0.164948454 0.313559322 194 21 2 213 3L:22796888-22797086 8 jim FBtr0333211|FBtr0304985|FBtr0330076|FBtr0333213|FBtr0100184|FBtr0078582|FBtr0333212 22795975|22789231|22795975|22795975|22795975|22789231|22795975 22797911|22797911|22797557|22797911|22797911|22797911|22797911 GGCAGCTA 8mer-A1 dme-miR-980-3p 3L - 22796917 22797090 5'utr jim FlyBase G29724.1 ATACAATTAATCGAGGATATACCACTTAGGCGTAATACTAGGATAGCTCCGATACAATGAGTATGAACATGTGACGTGATAGATAGGGCAGCTATTTGTGGCGAAGGCAGAAGGGGCAGAGCAAAAGGTTGATGGCAAAGAATAGGATGGGGAACGCAGACGTTGGCGCTGAGT 151 22797007 0.966308775 22 135 919 0.848360656 1.838849091 0.409836066 0.42384106 0.643442623 151 35 2 207 3L:22796917-22797090 8 132.5 522 FBgn0027339 2455.313333 43.04666667 66.12 0.053964599 3.078054824 2.003932244 -9 3 -3 0.5 dme-miR-8-3p 7mer-A1 AGTATTA 3L 22905391 22905397 + 3L_22905391_22905397_+ 0.452814241 0.5590929 0.50595357 0.075150389 BoYb FBtr0078559 22905182 22905470 3L + 22905369 22905405 3'utr BoYb FlyBase G32463.1 TAGAAAAAATCGTGTGCTCTTGAGTATTAAAACCTGT 11 22905389 0.733891611 3 10 89 0.933333333 1.146128036 0.066666667 0.272727273 0.466666667 11 1 0 14 3L:22905369-22905405 7 BoYb FBtr0078559 22905182 22905470 AGTATTA 7mer-A1 dme-miR-8-3p 3L + 22905367 22905401 3'utr BoYb FlyBase G24523.1 ACTAGAAAAAATCGTGTGCTCTTGAGTATTAAAAC 6 22905388 0.974411496 3 6 39 1 1 0 0.666666667 0.8 6 0 0 10 3L:22905367-22905401 7 8 523 FBgn0037205 488.74 16.67 25.54666667 0.016368621 0.479904019 0.313152401 2 3 2.5 0.5 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 22914478 22914484 + 3L_22914478_22914484_+ 0.754975606 0.691550869 0.723263238 0.044848035 CG12768 FBtr0331397|FBtr0331396 22914244|22914244 22914758|22914758 3L + 22914453 22914504 3'utr CG12768 FlyBase G32470.1 AAATAATTTTTTGACTTCGCCTACTGCAGCTATATTATAAAGTCGTCCGATT 12 22914477 0.793827541 5 12 102 1 1.113943352 0 0.083333333 0.153846154 12 0 0 13 3L:22914453-22914504 7 CG12768 FBtr0331396|FBtr0331397 22914244|22914244 22914758|22914758 GCAGCTA 7mer-A1 dme-miR-980-3p 3L + 22914462 22914490 3'utr CG12768 FlyBase G24530.1 TTTGACTTCGCCTACTGCAGCTATATTAT 11 22914475 0.703517005 5 10 74 0.928571429 1.113943352 0.142857143 0.181818182 0.357142857 11 1 0 13 3L:22914462-22914490 7 11 524 FBgn0037206 334.1233333 20.85 31.84666667 0.032921975 0.527577938 0.345405066 1 3 2 0.5 dme-miR-263a-5p 8mer-A1 GTGCCATA 3L 22951555 22951562 + 3L_22951555_22951562_+ 0.430587306 0.3921628 0.411375053 0.027170225 Mes2 FBtr0078561|FBtr0078563 22951389|22951389 22952248|22952248 3L + 22951204 22951589 stop_codon Mes2 FlyBase G32487.1 GGGCGTCGCAAGCGGAGGGTTGGATCTGCCGCCCCCACAAACTGTACGTGAGGTTTTGAACTCCAAGTTCTGCGGCTTTATTTCAGCCAAGCTAAACAGCATGGAGGACTCGGACGCGGACAATTTAATGAATCGCATTCTTCTCTTACTGGTTCAAGTGCAGCAGTGCGAAGGGTCCACGAAATAGACAGCGGAGGAGAAGAGCGCTAAGTGTACGGGTGTAATTATAGTAGCCAAAAAAAAGTACATAATGGAATGATGTTGCTGCTCAGAGCACTTATAACTGAATTTTCTTGCCATTATATATTACTTTCCTAAAGAAATACAAATTTACTTGCCAATGCCAAATCTGTGCCATACCAAAAGGATCAATCAAATATGAATGA 970 22951554 0.999995003 64 933 5859 0.966192171 2.190731785 0.072064057 0.135051546 0.253558719 970 32 6 1086 3L:22951204-22951589 8 Mes2 FBtr0078561|FBtr0078563 22951389|22951389 22952248|22952248 GTGCCATA 8mer-A1 dme-miR-263a-5p 3L + 22951332 22951588 stop_codon Mes2 FlyBase G24549.1 TGAATCGCATTCTTCTCTTACTGGTTCAAGTGCAGCAGTGCGAAGGGTCCACGAAATAGACAGCGGAGGAGAAGAGCGCTAAGTGTACGGGTGTAATTATAGTAGCCAAAAAAAAGTACATAATGGAATGATGTTGCTGCTCAGAGCACTTATAACTGAATTTTCTTGCCATTATATATTACTTTCCTAAAGAAATACAAATTTACTTGCCAATGCCAAATCTGTGCCATACCAAAAGGATCAATCAAATATGAATG 652 22951554 0.969292382 43 621 3926 0.952565344 2.390935107 0.065827686 0.377300613 0.60696999 652 46 3 984 3L:22951332-22951588 8 531 525 FBgn0037207 3401.653333 185.0666667 283.5166667 0.156100563 2.869236311 1.872905767 1 1 1 0.5 dme-miR-79-3p 7mer-A1 AGCTTTA 3L 22951968 22951974 + 3L_22951968_22951974_+ 0.823343907 0.718820829 0.771082368 0.073908993 Mes2 FBtr0078561|FBtr0078563 22951389|22951389 22952248|22952248 3L + 22951892 22952067 3'utr Mes2 FlyBase G32488.1 AAAAAGCGAGCATATTACTCATAGTTTCATATACAGCGATATGAATATTAACAATATCTGAACACTAAATGAGAACAGCTTTAACAATTTGTCGTTTTTGAATAAAACACCATCTTTGGCAGTAATGCTTTGCTATCGATGTACGCAGACAATGTTTTGGCCATTCAGCCCAATTT 46 22951961 0.922966987 25 43 358 0.936170213 1.643452676 0.191489362 0.02173913 0.042553191 46 3 0 44 3L:22951892-22952067 7 Mes2 FBtr0078561|FBtr0078563 22951389|22951389 22952248|22952248 AGCTTTA 7mer-A1 dme-miR-79-3p 3L + 22951843 22952013 3'utr Mes2 FlyBase G24552.1 CTTGTTAAGTTGAAAACGTAGAAATTAGAAAAGAAAAGTTTTTAACTTAAAAAAGCGAGCATATTACTCATAGTTTCATATACAGCGATATGAATATTAACAATATCTGAACACTAAATGAGAACAGCTTTAACAATTTGTCGTTTTTGAATAAAACACCATCTTTGGCAG 34 22951980 0.983481742 16 30 237 0.914893617 1.633468456 0.191489362 0.294117647 0.489361702 34 4 0 43 3L:22951843-22952013 7 7 526 FBgn0037207 3401.653333 185.0666667 283.5166667 0.002057823 0.037824207 0.024689907 7 -12 -2.5 0.5 dme-miR-305-5p 7mer-A1 GTACAAA 3L 234028 234034 - 3L_234028_234034_- 0.531215388 0.542990765 0.537103076 0.008326465 E(bx) FBtr0332101|FBtr0332103|FBtr0301348|FBtr0072522|FBtr0332102|FBtr0332104|FBtr0072521 233924|233924|233924|233924|233924|233924|233924 236879|234298|234298|234298|234298|234298|234298 3L - 233951 234112 3'utr E(bx) FlyBase G32851.1 AACGTACACCAGTATGCAATAAATTTCATATTCACCAGACATTTGTAAGATTAAAAATAATTAAGTAAAACCCCCTTTGTACAAAACATTAAAGTGTAAATAAACAGCATGCATTTCATTTGATATCCTTATCATATGCTGTAGGTTTAAACTTAGGCGTAT 118 234036 0.940288501 20 113 826 0.957746479 1.531478917 0.035211268 0.169491525 0.309859155 118 3 3 136 3L:233951-234112 7 E(bx) FBtr0072521|FBtr0332104|FBtr0332102|FBtr0072522|FBtr0301348|FBtr0332103|FBtr0332101 233924|233924|233924|233924|233924|233924|233924 234298|234298|234298|234298|234298|234298|236879 GTACAAA 7mer-A1 dme-miR-305-5p 3L - 233965 234094 3'utr E(bx) FlyBase G24839.1 ATAAATTTCATATTCACCAGACATTTGTAAGATTAAAAATAATTAAGTAAAACCCCCTTTGTACAAAACATTAAAGTGTAAATAAACAGCATGCATTTCATTTGATATCCTTATCATATGCTGTAGGTTT 88 234036 0.756104698 16 81 580 0.9375 1.477121255 0.0234375 0.329545455 0.5390625 88 5 3 120 3L:233965-234094 7 60 527 FBgn0000541 5641.79 79.62333333 122.1466667 0.010634923 0.753547955 0.49121275 2 2 2 0.5 dme-miR-13b-2-5p 6mer3-8 TTTGAC 3L 234419 234424 - 3L_234419_234424_- 0.699044324 0.5888374 0.643940862 0.077928046 E(bx) FBtr0332101 233924 236879 3L - 234387 234475 3'utr E(bx) FlyBase G32854.1 TCAAACACCTATACCAAACTATCTGAGTTTATAGGCGATATGACAAAAATTTTTGACAACTGCCGTTACTATAACCCAAAAGAATCATC 16 234409 0.979514159 12 15 100 0.947368421 1.255272505 0.157894737 0.1875 0.315789474 16 1 0 18 3L:234387-234475 6 E(bx) FBtr0332101 233924 236879 TTTGAC 6mer3-8 dme-miR-13b-2-5p 3L - 234393 234431 3'utr E(bx) FlyBase G24842.1 AAAAATTTTTGACAACTGCCGTTACTATAACCCAAAAGA 6 234410 0.968554305 5 5 42 0.875 0.84509804 0 0.333333333 0.5 6 1 0 7 3L:234393-234431 6 6.5 528 FBgn0000541 5641.79 79.62333333 122.1466667 0.001152117 0.081634362 0.053214715 -15 -14 -14.5 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3L 235158 235165 - 3L_235158_235165_- 0.442635223 0.429234028 0.435934625 0.009476079 E(bx) FBtr0332101|FBtr0332101|FBtr0332101 233924|233924|233924 236879|236879|236879 3L - 235106 235189 3'utr E(bx) FlyBase G32856.1 CGACGAGTCACAATTTTATATATGCTGTGATAAATGCCAGGATTGGTTTCATGGCCGTTGCGTTGGAATACTTCAGAGCGAAGC 107 235167 0.732358486 14 95 945 0.888888889 1.572096768 0.023809524 0.177570093 0.301587302 107 12 2 112 3L:235106-235189 8 E(bx) FBtr0332101|FBtr0332101|FBtr0332101 233924|233924|233924 236879|236879|236879 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 235100 235190 3'utr E(bx) FlyBase G24845.1 ACGACGAGTCACAATTTTATATATGCTGTGATAAATGCCAGGATTGGTTTCATGGCCGTTGCGTTGGAATACTTCAGAGCGAAGCAGAGTT 82 235167 0.990608586 14 71 733 0.846153846 1.439332694 0.053846154 0.426829268 0.638461538 82 17 3 110 3L:235100-235190 8 84 529 FBgn0000541 5641.79 79.62333333 122.1466667 0.014888892 1.054967137 0.68769785 2 2 2 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 23749013 23749019 + 3L_23749013_23749019_+ 0.74372008 0.741089661 0.742404871 0.001859974 CG17698 FBtr0111166|FBtr0111166|FBtr0111166|FBtr0333913|FBtr0333913|FBtr0333913|FBtr0333914|FBtr0333914|FBtr0333914|FBtr0333912|FBtr0333912|FBtr0333912 23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858 23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058 3L + 23748928 23749036 3'utr CG17698 FlyBase G32572.1 TTGAATTTGACAGTTTCCAAAAGCCAAACACTTGAAATACTTTAAAATATTTAATTATTAGTGATTAAATTTATGTATATTTTTTTGTGATAAAAATAAATTTAGAATA 92 23749011 0.983716914 20 80 1000 0.865384615 1.255272505 0.009615385 0.130434783 0.230769231 92 10 4 90 3L:23748928-23749036 7 CG17698 FBtr0333912|FBtr0333912|FBtr0333912|FBtr0333914|FBtr0333914|FBtr0333914|FBtr0333913|FBtr0333913|FBtr0333913|FBtr0111166|FBtr0111166|FBtr0111166 23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858|23748858 23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058|23749058 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 23748896 23749045 3'utr CG17698 FlyBase G24619.1 TTTCATAGAACAAAAAAACCAATTTTTTATTTTTGAATTTGACAGTTTCCAAAAGCCAAACACTTGAAATACTTTAAAATATTTAATTATTAGTGATTAAATTTATGTATATTTTTTTGTGATAAAAATAAATTTAGAATATTATAAAGT 80 23749011 0.993574972 18 72 894 0.90990991 1.527200119 0.036036036 0.3125 0.504504505 80 8 2 101 3L:23748896-23749045 7 76 530 FBgn0040056 619.7966667 30.24 46.48666667 0.12262086 2.513227513 1.634877384 2 2 2 0.5 dme-miR-263a-5p 7mer-m8 GTGCCAT 3L 2492103 2492109 + 3L_2492103_2492109_+ 0.646704276 0.647086236 0.646895256 0.000270044 CG1146 FBtr0344219|FBtr0072921|FBtr0072923|FBtr0072922 2492069|2492069|2492069|2492069 2492613|2492613|2492613|2492613 3L + 2492089 2492160 3'utr CG1146 FlyBase G27354.1 AGGAACGTTTTATAGTGCCATCCCCCAGGGTCAGATGGAACAACCAGGTGAACTCCCATCCCAACCAGGCAT 35 2492107 0.807531554 7 33 140 0.953488372 1.612783857 0.186046512 0.228571429 0.372093023 35 2 0 41 3L:2492089-2492160 7 CG1146 FBtr0072923|FBtr0072922|FBtr0344219|FBtr0072921 2492069|2492069|2492069|2492069 2492613|2492613|2492613|2492613 GTGCCAT 7mer-m8 dme-miR-263a-5p 3L + 2492088 2492124 3'utr CG1146 FlyBase G20706.1 AAGGAACGTTTTATAGTGCCATCCCCCAGGGTCAGAT 13 2492106 0.802836265 3 13 66 1 1.322219295 0.285714286 0.461538462 0.666666667 13 0 0 21 3L:2492088-2492124 7 17 531 FBgn0035346 752.39 49.49 76.20666667 0.022594665 0.343503738 0.223077596 -4 -3 -3.5 0.5 dme-miR-79-3p 8mer-A1 TAGCTTTA 3L 2507173 2507180 - 3L_2507173_2507180_- 0.411347715 0.427493758 0.419420737 0.011417017 Spn FBtr0304620|FBtr0304614|FBtr0304619 2506569|2505243|2505243 2508306|2508306|2508306 3L - 2507159 2507248 3'utr Spn FlyBase G33690.1 GGAAGCAAGCAGCTTCAAGAGCGATTTCTATTCGTTAGCAAGTATGTCTGTGTGAATGGGCGTGATTGTAGCTTTAATTTCAATTTACTT 161 2507182 0.825294478 11 156 1527 0.972972973 1.653212514 0.324324324 0.124223602 0.237837838 161 2 3 180 3L:2507159-2507248 8 Spn FBtr0304619|FBtr0304614|FBtr0304620 2505243|2505243|2506569 2508306|2508306|2508306 TAGCTTTA 8mer-A1 dme-miR-79-3p 3L - 2507158 2507246 3'utr Spn FlyBase G25473.3 AAGCAAGCAGCTTCAAGAGCGATTTCTATTCGTTAGCAAGTATGTCTGTGTGAATGGGCGTGATTGTAGCTTTAATTTCAATTTACTTT 124 2507182 0.797884509 15 122 1181 0.985221675 2 0.325123153 0.475806452 0.679802956 124 2 1 200 3L:2507158-2507246 8 89.5 532 FBgn0010905 2101.51 31.02666667 47.43666667 0.042588425 2.884615385 1.886726161 2 2 2 0.5 dme-miR-317-5p 6mer2-7 TATCCC 3L 2507473 2507478 - 3L_2507473_2507478_- 0.753961893 0.657119694 0.705540794 0.068477776 Spn FBtr0304620|FBtr0304614|FBtr0304619 2506569|2505243|2505243 2508306|2508306|2508306 3L - 2507464 2507494 3'utr Spn FlyBase G33693.1 ACGGAACGTACTGTACTATCCCCTAAAAATT 14 2507481 0.58831537 5 14 71 1 1.255272505 0.222222222 0.214285714 0.388888889 14 0 0 18 3L:2507464-2507494 6 Spn FBtr0304619|FBtr0304614|FBtr0304620 2505243|2505243|2506569 2508306|2508306|2508306 TATCCC 6mer2-7 dme-miR-317-5p 3L - 2507416 2507497 3'utr Spn FlyBase G25475.1 TTTACGGAACGTACTGTACTATCCCCTAAAAATTAATGCTAAAGTATTGTACTGTATGCTATGCCTGAAAGTCATTTAAGTA 17 2507477 0.868674496 10 16 115 0.956521739 1.342422681 0.173913043 0.235294118 0.434782609 17 1 0 22 3L:2507416-2507497 6 10.5 533 FBgn0010905 2101.51 31.02666667 47.43666667 0.004996407 0.338418565 0.221347762 3 -1 1 0.5 dme-miR-33-5p 8mer-A1 CAATGCAA 3L 2595437 2595444 + 3L_2595437_2595444_+ 0.61290589 0.355981099 0.484443494 0.181673268 dos FBtr0072926|FBtr0072927 2595045|2595045 2595590|2595590 3L + 2595284 2595471 3'utr dos FlyBase G27392.1 ATTTCTGTGTGCTGTTTTGAATCTGTAATCTGTAACCCGTATCTGAATCTATGTCGTATTCGTATTTAAATCGTGCTTCCAACACTTCCATGTTTATTGTTAAGCTTCGGAATCAAAATGTAACCATGACAAACGATCTTAGTGCTAATTTTACAATGCAAACAATTATTTTATATACGCAAGCGAAA 142 2595424 0.884786622 36 132 1197 0.933333333 1.447158031 0.116666667 0.225352113 0.388888889 142 7 5 168 3L:2595284-2595471 8 dos FBtr0072926|FBtr0072927 2595045|2595045 2595590|2595590 CAATGCAA 8mer-A1 dme-miR-33-5p 3L + 2595373 2595472 3'utr dos FlyBase G20739.2 ATGTTTATTGTTAAGCTTCGGAATCAAAATGTAACCATGACAAACGATCTTAGTGCTAATTTTACAATGCAAACAATTATTTTATATACGCAAGCGAAAT 49 2595425 0.711057503 18 44 309 0.941176471 1.329058719 0.088235294 0.285714286 0.485294118 49 2 2 64 3L:2595373-2595472 8 12.5 534 FBgn0016794 1172.68 41.23 62.95666667 0.010659344 0.303177298 0.198549267 13 12 12.5 0.5 dme-miR-1012-3p 6mer3-8 TTGACT 3L 27083335 27083340 - 3L_27083335_27083340_- 0.578117598 0.430549421 0.504333509 0.104346475 CG40228 FBtr0113841 27082089 27083460 3L - 27083316 27083426 3'utr CG40228 FlyBase G39587.1 TAAATTGCTAGAGCCCTCTAAATTATACCATAAAATAAGTTTAATACAAAAAATTTAGCATAATAGCGAGATTGAAATAAACATTTTTGACTTATTAAAATAAGCTGAACC 48 27083340 0.808217654 12 44 415 0.98245614 1.447158031 0.052631579 0.14893617 0.298245614 47 0 1 56 3L:27083316-27083426 6 CG40228 FBtr0113841 27082089 27083460 TTGACT 6mer3-8 dme-miR-1012-3p 3L - 27083302 27083378 3'utr CG40228 FlyBase G29908.1 AAAAATTTAGCATAATAGCGAGATTGAAATAAACATTTTTGACTTATTAAAATAAGCTGAACCCATGAAATTCTAAC 31 27083340 0.988977688 9 29 281 0.958333333 1.361727836 0.041666667 0.387096774 0.604166667 31 1 1 46 3L:27083302-27083378 6 31.5 535 FBgn0063670 550.58 55.34333333 84.84333333 0.057212394 0.569174246 0.371272542 0 0 0 0.5 dme-miR-305-3p 7mer-A1 TGTGCCA 3L 2788070 2788076 - 3L_2788070_2788076_- 0.612638615 0.632796645 0.62271763 0.014253858 Tet FBtr0309120|FBtr0309118|FBtr0333880|FBtr0309119|FBtr0309117|FBtr0333881 2786205|2786485|2786205|2786485|2786205|2786485 2788549|2788549|2788549|2788549|2788549|2788549 3L - 2787963 2788094 3'utr Tet FlyBase G33832.1 TAAATGCGTTTGATTTAGTGTGCCATAGGAGGAGAATTAGAAGAGTTCCCGGAAAAAGAGTTGCAGTTGAAAGAGTACAGTTGACGCTGCCGGGCCAGAGTTGTCACCATTCCACAAGAAAATATCCCAGAT 84 2788076 0.971175122 17 81 470 0.967741935 1.954242509 0.344086022 0.071428571 0.161290323 84 3 0 90 3L:2787963-2788094 7 Tet FBtr0309117|FBtr0333881|FBtr0333880|FBtr0309119|FBtr0309120|FBtr0309118 2786205|2786485|2786205|2786485|2786205|2786485 2788549|2788549|2788549|2788549|2788549|2788549 TGTGCCA 7mer-A1 dme-miR-305-3p 3L - 2788029 2788088 3'utr Tet FlyBase G25581.2 CGTTTGATTTAGTGTGCCATAGGAGGAGAATTAGAAGAGTTCCCGGAAAAAGAGTTGCAG 37 2788076 0.965970725 7 36 220 0.96969697 1.806179974 0.5 0.594594595 0.772727273 37 2 0 64 3L:2788029-2788088 7 49 536 FBgn0263392 3136.83 38.19 58.6 0.015620866 1.283058392 0.836177474 0 0 0 0.5 dme-miR-305-5p 8mer-m1 AGTACAAT 3L 3051708 3051715 + 3L_3051708_3051715_+ 0.492234355 0.523839239 0.508036797 0.022347968 CG32485 FBtr0072985 3051513 3051765 3L + 3051646 3051720 3'utr CG32485 FlyBase G27519.1 TGTAAATCGATGTGTTTAACAAGTTGATTGTAAAGCGTATTCTATTGGACACCACAACTATTAGTACAATGCTAA 34 3051706 0.982885938 8 30 229 0.875 1.243038049 0.05 0.147058824 0.275 34 4 1 35 3L:3051646-3051720 8 CG32485 FBtr0072985 3051513 3051765 AGTACAAT 8mer-m1 dme-miR-305-5p 3L + 3051679 3051719 3'utr CG32485 FlyBase G20832.1 AGCGTATTCTATTGGACACCACAACTATTAGTACAATGCTA 14 3051706 0.674387683 5 14 88 1 1.397940009 0 0.5 0.72 14 0 0 25 3L:3051679-3051719 8 20 537 FBgn0052485 128.92 14.17333333 21.81 0.155134967 1.411100659 0.917010546 2 2 2 0.5 dme-miR-33-5p 7mer-m8 CAATGCA 3L 3115152 3115158 - 3L_3115152_3115158_- 0.582380101 0.547767897 0.565073999 0.024474521 prominin-like FBtr0073118|FBtr0306258 3114557|3114448 3115919|3115919 3L - 3115130 3115229 3'utr prominin-like FlyBase G33926.1 AAATATGATCCAAAATACCAAAACTGCCATTTTAATTTAGAAAAGAGCAGAGCACAGAGTTGGGAGTTATTCAATGCATTTAATGTATTTATTTTAGAAA 41 3115159 0.755576246 14 38 341 0.933333333 1.322219295 0.244444444 0.097560976 0.177777778 41 2 1 42 3L:3115130-3115229 7 prominin-like FBtr0306258|FBtr0073118 3114448|3114557 3115919|3115919 CAATGCA 7mer-m8 dme-miR-33-5p 3L - 3115138 3115224 3'utr prominin-like FlyBase G25655.1 TGATCCAAAATACCAAAACTGCCATTTTAATTTAGAAAAGAGCAGAGCACAGAGTTGGGAGTTATTCAATGCATTTAATGTATTTAT 23 3115159 0.860197531 9 23 182 1 1.579783597 0.289473684 0.391304348 0.631578947 23 0 0 38 3L:3115138-3115224 7 15.5 538 FBgn0026189 6878.313333 173.88 267.93 0.002253459 0.089141937 0.057850931 1 1 1 0.5 dme-miR-283-5p 8mer-A1 TGATATTA 3L 3234957 3234964 + 3L_3234957_3234964_+ 0.443787429 0.415406084 0.429596756 0.02006861 CG11505 FBtr0073046|FBtr0308061 3232050|3232050 3236604|3236604 3L + 3234818 3234998 3'utr CG11505 FlyBase G27702.1 TAACACACTGTACAGTTGAACCTCAATAGGGCGGACTGCGGACTGCGCCTTAGGTGAATCAATGGATGAGGAACAGCATGTGGCCAGAGTGGAGCCAGCTGTTCGTTGGCGACGTCTCCAAGCTTCCGACAATGAGATGTGATATTATGCAATTGACAAATCATCAATTGTGTGCGACAAA 77 3234963 0.973348285 23 68 461 0.903225806 1.924279286 0.193548387 0.171052632 0.322580645 76 9 0 84 3L:3234818-3234998 8 CG11505 FBtr0308061|FBtr0073046 3232050|3232050 3236604|3236604 TGATATTA 8mer-A1 dme-miR-283-5p 3L + 3234907 3234974 3'utr CG11505 FlyBase G20982.1 TGGAGCCAGCTGTTCGTTGGCGACGTCTCCAAGCTTCCGACAATGAGATGTGATATTATGCAATTGAC 47 3234962 0.829281749 10 43 298 0.86746988 1.079181246 0.253012048 0.425531915 0.674698795 47 6 5 72 3L:3234907-3234974 8 43.5 539 FBgn0035424 4177.206667 52.67666667 80.83333333 0.010413658 0.825792571 0.53814433 -6 -5 -5.5 0.5 dme-miR-1008-3p 7mer-m8 AGCTGTG 3L 3322226 3322232 + 3L_3322226_3322232_+ 0.578072594 0.593423597 0.585748096 0.010854796 CG42456 FBtr0300240 3320650 3322489 3L + 3322137 3322255 3'utr CG42456 FlyBase G27726.1 GTTATTATGGGTGACATGGTCTCTCTTGTGGAGAATGCTCTTGTAACCAGATTGTGAAATGAAGAAACTCGGTTCAGGAATTCATATTTAGCTGTGCTAACTATTATATTGTATTGTTT 147 3322224 0.820435875 21 142 1328 0.963636364 1.900367129 0.248484848 0.102040816 0.2 147 5 1 159 3L:3322137-3322255 7 CG42456 FBtr0300240 3320650 3322489 AGCTGTG 7mer-m8 dme-miR-1008-3p 3L + 3322136 3322247 3'utr CG42456 FlyBase G21005.1 AGTTATTATGGGTGACATGGTCTCTCTTGTGGAGAATGCTCTTGTAACCAGATTGTGAAATGAAGAAACTCGGTTCAGGAATTCATATTTAGCTGTGCTAACTATTATATTG 101 3322224 0.799609662 20 96 880 0.953642384 2.158362492 0.231788079 0.356435644 0.569536424 101 7 0 144 3L:3322136-3322247 7 69.5 540 FBgn0259933 101.7866667 5.366666667 8.34 0.682800629 12.95031056 8.333333333 2 2 2 0.5 dme-miR-999-3p 8mer-A1 AGTTAACA 3L 3505209 3505216 + 3L_3505209_3505216_+ 0.621832401 0.360993147 0.491412774 0.184441238 CG42324 FBtr0334633|FBtr0330142 3505096|3505096 3505316|3505316 3L + 3505190 3505251 3'utr CG42324 FlyBase G27820.1 AATCACGAAGACTGCGTTAAGTTAACAATATGATTTCGTTCCCTTGACTGCATTTAACAATC 21 3505233 0.782574145 11 21 168 1 1.397940009 0.08 0.142857143 0.28 21 0 0 25 3L:3505190-3505251 8 CG42324 FBtr0330142|FBtr0334633 3505096|3505096 3505316|3505316 AGTTAACA 8mer-A1 dme-miR-999-3p 3L + 3505171 3505246 3'utr CG42324 FlyBase G21076.1 TTTTCTAGGCAACGGATTCAATCACGAAGACTGCGTTAAGTTAACAATATGATTTCGTTCCCTTGACTGCATTTAA 19 3505232 0.990981629 10 16 159 0.869565217 1.301029996 0.086956522 0.210526316 0.347826087 19 3 0 20 3L:3505171-3505246 8 6.5 541 FBgn0259224 58.33333333 1.43 2.216666667 0.111428571 4.545454545 2.932330827 -24 -23 -23.5 0.5 dme-miR-277-3p 8mer-A1 TGCATTTA 3L 3505238 3505245 + 3L_3505238_3505245_+ 0.571440383 0.584500865 0.577970624 0.009235168 CG42324 FBtr0334633|FBtr0330142 3505096|3505096 3505316|3505316 3L + 3505190 3505251 3'utr CG42324 FlyBase G27820.1 AATCACGAAGACTGCGTTAAGTTAACAATATGATTTCGTTCCCTTGACTGCATTTAACAATC 21 3505233 0.782574145 11 21 168 1 1.397940009 0.08 0.142857143 0.28 21 0 0 25 3L:3505190-3505251 8 CG42324 FBtr0330142|FBtr0334633 3505096|3505096 3505316|3505316 TGCATTTA 8mer-A1 dme-miR-277-3p 3L + 3505171 3505246 3'utr CG42324 FlyBase G21076.1 TTTTCTAGGCAACGGATTCAATCACGAAGACTGCGTTAAGTTAACAATATGATTTCGTTCCCTTGACTGCATTTAA 19 3505232 0.990981629 10 16 159 0.869565217 1.301029996 0.086956522 0.210526316 0.347826087 19 3 0 20 3L:3505171-3505246 8 9.5 542 FBgn0259224 58.33333333 1.43 2.216666667 0.162857143 6.643356643 4.285714286 5 6 5.5 0.5 dme-miR-92b-3p 8mer-A1 GTGCAATA 3L 3509329 3509336 + 3L_3509329_3509336_+ 0.382364142 0.551183209 0.466773675 0.11937313 CG42324 FBtr0334634|FBtr0334632|FBtr0334635|FBtr0334636 3508532|3508532|3508532|3508532 3510895|3510895|3510895|3510895 3L + 3509187 3509350 3'utr CG42324 FlyBase G27840.1 AACCACGAGAATTCGAAAACTTTGCCCAAGCAAACTTAGGTTACACTGGAAATATATGAATTATATTTATAGGAATATATAGATAATTATGCTATATACGATTTATATTTGATAAGCGCGTTATATTTTCTACATTCCGATTGTGCAATATTTTTTGGTAGTGT 27 3509327 0.973582754 13 26 233 0.96875 1.491361694 0.125 0.074074074 0.21875 27 1 0 31 3L:3509187-3509350 8 CG42324 FBtr0334636|FBtr0334635|FBtr0334632|FBtr0334634 3508532|3508532|3508532|3508532 3510895|3510895|3510895|3510895 GTGCAATA 8mer-A1 dme-miR-92b-3p 3L + 3509315 3509348 3'utr CG42324 FlyBase G21098.1 TCTACATTCCGATTGTGCAATATTTTTTGGTAGT 9 3509327 0.842265092 2 7 92 0.705882353 1.079181246 0.117647059 0.555555556 0.764705882 9 5 0 12 3L:3509315-3509348 8 8.5 543 FBgn0259224 58.33333333 1.43 2.216666667 0.145714286 5.944055944 3.834586466 2 2 2 0.5 dme-miR-79-3p 7mer-m8 TAGCTTT 3L 3615165 3615171 + 3L_3615165_3615171_+ 0.570689305 0.612045618 0.591367462 0.02924332 CG10359 FBtr0290290|FBtr0273204 3615072|3615072 3615244|3615244 3L + 3615135 3615195 3'utr CG10359 FlyBase G27866.1 AATCGATTGCTTGCATTTTAACCCTAGCTTTAGCTTTGAATCTCTCTGTGCGTGTGTGTGT 24 3615170 0.824682188 10 20 234 0.833333333 1.397940009 0.5 0.208333333 0.366666667 24 5 0 25 3L:3615135-3615195 7 CG10359 FBtr0273204|FBtr0290290 3615072|3615072 3615244|3615244 TAGCTTT 7mer-m8 dme-miR-79-3p 3L + 3615127 3615196 3'utr CG10359 FlyBase G21116.1 TAACCCACAATCGATTGCTTGCATTTTAACCCTAGCTTTAGCTTTGAATCTCTCTGTGCGTGTGTGTGTA 19 3615170 0.994499024 7 14 201 0.724137931 1.322219295 0.206896552 0.421052632 0.620689655 19 8 0 21 3L:3615127-3615196 7 14 544 FBgn0035452 20.66666667 1.506666667 2.33 0.677419355 9.292035398 6.008583691 -5 -5 -5 0.5 dme-miR-304-5p 8mer-A1 TGAGATTA 3L 3813693 3813700 + 3L_3813693_3813700_+ 0.581812288 0.591898601 0.586855444 0.007132091 CG12006 FBtr0073150|FBtr0073149 3813623|3813623 3813958|3813958 3L + 3813605 3813717 stop_codon CG12006 FlyBase G27872.1 ACGAGAATCTGTTCAATTAGATAATAGAGAAAATAAGAGAACCCACCACCGACGCCCTCCGTTCAAAAGCAAGAAGCAATGACACATTTGAGATTAACTAATAGATACAAACC 53 3813692 0.999859162 8 51 308 0.970149254 1.812913357 0.059701493 0.226415094 0.388059701 53 2 0 65 3L:3813605-3813717 8 CG12006 FBtr0073149|FBtr0073150 3813623|3813623 3813958|3813958 TGAGATTA 8mer-A1 dme-miR-304-5p 3L + 3813564 3813704 stop_codon CG12006 FlyBase G21121.1 CGATCATCCGCCGCTGGAGGATCTCGTCCTGGCCAACGAGAACGAGAATCTGTTCAATTAGATAATAGAGAAAATAAGAGAACCCACCACCGACGCCCTCCGTTCAAAAGCAAGAAGCAATGACACATTTGAGATTAACTA 25 3813692 0.974048468 8 22 122 0.875 1.06694679 0.1 0.48 0.675 25 3 2 35 3L:3813564-3813704 8 27 545 FBgn0035464 622.06 34.45666667 52.80333333 0.043404173 0.783592919 0.511331355 1 1 1 0.5 dme-miR-283-5p 6mer3-8 TGATAT 3L 3936739 3936744 - 3L_3936739_3936744_- 0.44353503 0.443231978 0.443383504 0.000214253 CG10866 FBtr0073173|FBtr0345342 3936595|3936058 3937012|3937012 3L - 3936720 3936776 3'utr CG10866 FlyBase G34186.2 TCTAACTAGAATACAGATAATATCCGGATATGTGATATGTAGTCCTTAGACAAACTA 89 3936748 0.988611041 10 80 766 0.91588785 1.991226076 0.065420561 0.157303371 0.299065421 89 9 0 98 3L:3936720-3936776 6 CG10866 FBtr0345342|FBtr0073173 3936058|3936595 3937012|3937012 TGATAT 6mer3-8 dme-miR-283-5p 3L - 3936655 3936770 3'utr CG10866 FlyBase G25860.1 TAGAATACAGATAATATCCGGATATGTGATATGTAGTCCTTAGACAAACTAGAGTAACGAGCATAGCGCACAACGATATCTAATCGATTTTCAACTTCAACTCTGACTCTTGTAAC 74 3936739 0.985422993 15 68 564 0.896551724 1.716003344 0.103448276 0.391891892 0.612068966 74 11 1 104 3L:3936655-3936770 6 75 546 FBgn0035475 72.03666667 6.396666667 9.86 1.041136458 11.7248567 7.606490872 4 -5 -0.5 0.5 dme-bantam-3p 7mer-A1 GATCTCA 3L 4038288 4038294 - 3L_4038288_4038294_- 0.783098294 0.789774937 0.786436615 0.004721069 CG11593 FBtr0114509|FBtr0332982 4037521|4037521 4038458|4038458 3L - 4038211 4038392 3'utr CG11593 FlyBase G34196.1 ACTCGCTACTCGAGCCTCTGCATTCCCCATCTTCAATAAGGACTGAGGCTAATCCTCCAAACCGATCGTTTGCGCTCTCTCGCTATGCTTTAATTTAAGATCTCAATCTTTGTGATACTTTATTTTTGCCTTCTCTCAGCCAAGTCGAAATCCCCCCCAGCATTTTTCTGTGTGAAGCGTGA 190 4038301 0.987340644 28 178 1597 0.937219731 1.278753601 0.295964126 0.152631579 0.278026906 190 4 10 209 3L:4038211-4038392 7 CG11593 FBtr0332982|FBtr0114509 4037521|4037521 4038458|4038458 GATCTCA 7mer-A1 dme-bantam-3p 3L - 4038231 4038417 3'utr CG11593 FlyBase G25868.1 TGCAAACTTAACGCATTCATGCCACACTCGCTACTCGAGCCTCTGCATTCCCCATCTTCAATAAGGACTGAGGCTAATCCTCCAAACCGATCGTTTGCGCTCTCTCGCTATGCTTTAATTTAAGATCTCAATCTTTGTGATACTTTATTTTTGCCTTCTCTCAGCCAAGTCGAAATCCCCCCCAGCA 108 4038299 0.984197876 30 103 906 0.961783439 2.178976947 0.324840764 0.342592593 0.547770701 108 6 0 151 3L:4038231-4038417 7 80.5 547 FBgn0035488 490 23.04 35.21 0.164285714 3.493923611 2.286282306 7 5 6 0.5 dme-miR-33-5p 7mer-A1 AATGCAA 3L 4094424 4094430 - 3L_4094424_4094430_- 0.664566285 0.505167311 0.584866798 0.112712114 CG14995 FBtr0073272|FBtr0073271|FBtr0310630|FBtr0073273|FBtr0302304|FBtr0300877 4094341|4094341|4094341|4094341|4094341|4094341 4095008|4095008|4095008|4095008|4095008|4097425 3L - 4094398 4094473 3'utr CG14995 FlyBase G34204.1 AAAGCAAATAACGCTAAACCTTAATTTTAATATATTTACCTAAAATGCAATGAACACGTCCAGTTTATGTTTGCCG 8 4094423 0.977098458 5 7 56 0.888888889 0.602059991 0 0.125 0.222222222 8 0 1 8 3L:4094398-4094473 7 CG14995 FBtr0073272|FBtr0310630|FBtr0302304|FBtr0073271|FBtr0073273|FBtr0300877 4094341|4094341|4094341|4094341|4094341|4094341 4095008|4095008|4095008|4095008|4095008|4097425 AATGCAA 7mer-A1 dme-miR-33-5p 3L - 4094406 4094445 3'utr CG14995 FlyBase G25875.1 AATATATTTACCTAAAATGCAATGAACACGTCCAGTTTAT 9 4094424 0.95768435 4 8 43 0.923076923 1.079181246 0.384615385 0.222222222 0.461538462 9 1 0 12 3L:4094406-4094445 7 7.5 548 FBgn0035497 401.3666667 15.55333333 23.84 0.018686156 0.482211745 0.314597315 -7 -6 -6.5 0.5 dme-miR-33-5p 8mer-A1 CAATGCAA 3L 4140749 4140756 + 3L_4140749_4140756_+ 0.382689019 0.408296913 0.395492966 0.01810752 Ras64B FBtr0073212 4140459 4141398 3L + 4140714 4140823 3'utr Ras64B FlyBase G27969.1 AAATAGCTACGAAGAATCTTACAACTGACAACTAACAATGCAAAATGCAAACAGAAACACGAAACATAGGTAGATATATACAACAGATTCACACGAATAACTTATATATA 48 4140746 0.940494905 9 44 177 0.9 1.73239376 0.35 0.208333333 0.366666667 48 6 0 54 3L:4140714-4140823 8 Ras64B FBtr0073212 4140459 4141398 CAATGCAA 8mer-A1 dme-miR-33-5p 3L + 4140694 4140766 3'utr Ras64B FlyBase G21184.1 GAATAAACTTCGCCACTCTCAAATAGCTACGAAGAATCTTACAACTGACAACTAACAATGCAAAATGCAAACA 30 4140746 0.850917177 9 28 111 0.955555556 1.633468456 0.488888889 0.333333333 0.555555556 30 2 0 43 3L:4140694-4140766 8 28.5 549 FBgn0003206 861.7733333 65.11666667 99.82666667 0.033071341 0.437675966 0.285494858 3 3 3 0.5 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 4173445 4173451 + 3L_4173445_4173451_+ 0.567170555 0.708347567 0.637759061 0.099827214 Ero1L FBtr0073217 4173388 4173789 3L + 4173356 4173623 stop_codon Ero1L FlyBase G27974.1 CGAGATGGAGAATTTCCGGTGCGTGCTGAGGTAACCCATCCAGACTGGACTAACCGAGCGACGAGCCGGATCTCATTCGCCTCACATGAGCAGCTAGTTAATTCATACGCACATCGCTGGGGCTGCGTCTTGGACTTCCTACTGAATGCGGTTTCCCTCCCATAGTTCGTAACATTTTTGAGGCCAGAGGCTAGTAACCCCAGGATAGCTGCTTCCCTGTACATACAAACTATTACCCTAGGCTACTTGTACTTTAGCGCACCGTATC 507 4173442 0.949795386 31 498 3210 0.985148515 2.298853076 0.072607261 0.151873767 0.290429043 507 7 2 597 3L:4173356-4173623 7 Ero1L FBtr0073217 4173388 4173789 GCAGCTA 7mer-A1 dme-miR-980-3p 3L + 4173339 4173629 stop_codon Ero1L FlyBase G21189.1 CTATCCAACAGTATATACGAGATGGAGAATTTCCGGTGCGTGCTGAGGTAACCCATCCAGACTGGACTAACCGAGCGACGAGCCGGATCTCATTCGCCTCACATGAGCAGCTAGTTAATTCATACGCACATCGCTGGGGCTGCGTCTTGGACTTCCTACTGAATGCGGTTTCCCTCCCATAGTTCGTAACATTTTTGAGGCCAGAGGCTAGTAACCCCAGGATAGCTGCTTCCCTGTACATACAAACTATTACCCTAGGCTACTTGTACTTTAGCGCACCGTATCACCCTA 405 4173442 0.973535837 34 392 2374 0.975409836 2.172456974 0.091803279 0.377777778 0.586885246 405 12 3 595 3L:4173339-4173629 7 163 550 FBgn0261274 553.5433333 32.04333333 49.15666667 0.294466558 5.086861542 3.315928663 3 3 3 0.5 dme-miR-14-3p 7mer-A1 AGACTGA 3L 4246452 4246458 - 3L_4246452_4246458_- 0.823313472 0.823129659 0.823221566 0.000129966 ago FBtr0073247|FBtr0073246|FBtr0073245 4246341|4246341|4246341 4247475|4247475|4247475 3L - 4246433 4246478 3'utr ago FlyBase G34293.1 CGAACATATATTTTAATTATAGACTGATTTATTAGTAATTGAAATT 138 4246461 0.629084531 14 130 1594 0.946428571 1.72427587 0.029761905 0.18115942 0.327380952 138 7 2 159 3L:4246433-4246478 7 ago FBtr0073246|FBtr0073245|FBtr0073247 4246341|4246341|4246341 4247475|4247475|4247475 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 4246425 4246490 3'utr ago FlyBase G25945.1 GAAATCATTAAGCGAACATATATTTTAATTATAGACTGATTTATTAGTAATTGAAATTAATCTACA 117 4246462 0.992941524 15 109 1278 0.942307692 1.866287339 0.038461538 0.256410256 0.442307692 117 8 1 147 3L:4246425-4246490 7 125 551 FBgn0041171 1117.28 25.37333333 39.01 0.111878849 4.92643195 3.204306588 3 4 3.5 0.5 dme-miR-308-3p 7mer-m1 TGTGATT 3L 4405020 4405026 + 3L_4405020_4405026_+ 0.516784589 0.512874172 0.51482938 0.00276507 Syx17 FBtr0073293 4404847 4405168 3L + 4405001 4405037 3'utr Syx17 FlyBase G28070.2 TAGTTCAATATCCCCATTTTGTGATTTTCCACGTGCA 120 4405019 0.602524336 9 113 1180 0.946745562 1.602059991 0.01183432 0.275 0.485207101 120 6 3 160 3L:4405001-4405037 7 Syx17 FBtr0073293 4404847 4405168 TGTGATT 7mer-m1 dme-miR-308-3p 3L + 4404932 4405036 stop_codon Syx17 FlyBase G21253.1 AGCCACCAACGGAGTGATTTGCAGCGTGCGCAGCTATTGTTCCGTTCAGTAGAAATTTGACCACGATTTTAGTTCAATATCCCCATTTTGTGATTTTCCACGTGC 103 4405019 0.989410739 11 101 981 0.981012658 2.190331698 0.056962025 0.398058252 0.607594937 103 3 0 155 3L:4404932-4405036 7 100 552 FBgn0035540 155.05 12.22333333 18.79666667 0.644953241 8.181074448 5.320092215 1 1 1 0.5 dme-miR-14-3p 7mer-A1 AGACTGA 3L 5158850 5158856 - 3L_5158850_5158856_- 0.815500471 0.721099907 0.768300189 0.066751304 shep FBtr0308859|FBtr0077174|FBtr0333288|FBtr0333289 5157906|5155819|5155819|5158793 5162466|5162466|5162466|5162466 3L - 5158828 5158871 5'utr shep FlyBase G34491.1 ACGATTATTTGCTTTAGACTGACTACGAACTGAAACTGTAACAA 9 5158858 0.976034573 6 9 65 1 1.041392685 0.181818182 0.111111111 0.272727273 9 0 0 11 3L:5158828-5158871 7 shep FBtr0333288|FBtr0333289|FBtr0308859|FBtr0077174 5155819|5158793|5157906|5155819 5162466|5162466|5162466|5162466 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 5158807 5158869 5'utr shep FlyBase G26066.1 GATTATTTGCTTTAGACTGACTACGAACTGAAACTGTAACAATAACAACAAATGCAGGATTGT 7 5158858 0.982139748 4 7 51 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 3L:5158807-5158869 7 7 553 FBgn0052423 9763.176667 275.8933333 425.4466667 0.00071698 0.025372124 0.016453296 2 2 2 0.5 dme-miR-184-3p 6mer2-7 CCGTCC 3L 5559567 5559572 - 3L_5559567_5559572_- 0.504044873 0.788059666 0.646052269 0.200828791 sinu FBtr0077136 5559468 5560751 3L - 5559503 5559625 3'utr sinu FlyBase G34543.1 ATTTTCTAAACCGAGAATTTAGCAATGTATTAAAGCAATACATACGTCTTTTACCGTCCCATATACAATAATATGTGTAACATTTTTATGTACAAACGACTTTTAGCTAAAGCGAAGAATAAT 414 5559574 0.749079152 20 401 2901 0.968565815 1.847748879 0.074656189 0.18115942 0.333988212 414 10 6 493 3L:5559503-5559625 6 sinu FBtr0077136 5559468 5560751 CCGTCC 6mer2-7 dme-miR-184-3p 3L - 5559545 5559594 3'utr sinu FlyBase G26109.2 AAAGCAATACATACGTCTTTTACCGTCCCATATACAATAATATGTGTAAC 203 5559574 0.64272732 8 190 1495 0.94137931 1.959041392 0.031034483 0.310344828 0.517241379 203 15 2 273 3L:5559545-5559594 6 237 554 FBgn0010894 232.6666667 13.51333333 20.52333333 1.018624642 17.53823384 11.54783174 2 2 2 0.5 dme-miR-14-3p 7mer-A1 AGACTGA 3L 5750322 5750328 - 3L_5750322_5750328_- 0.748856463 0.552225608 0.650541036 0.139039043 DnaJ-1 FBtr0077124|FBtr0077123 5750027|5750027 5750588|5750588 3L - 5750070 5750551 3'utr DnaJ-1 FlyBase G34598.1 CGCATATAATTGTTATCACTTTAGTTAAGGCCTATATTTAATTTACCGTACGTACTCGTAAGACAACTTAGCCTAACCAATTGTAGCCCTAAGCTAGTGAGTGTGCCAAGCGAAGAGCTGTAGATATTGGCCGAGGATGCAAGCGCTGGATAGGATTAGGAAAGAGAACAACACACACACACACACACACATAAAGCAGCCCGTGTAGCCCGTTTCGTGTTGGAGACTGATCGATTATTAGCTATTTAGCATTACACAAATTCCATAAGTTGTTTTGTTTACCGCCACATGAATCGGTGCCTCAACATCTTATACATAATAATCCCAAAACAAAATATTAAATAAATGAGGTATTATAAATTTAAAGTAACTAACCATTTTTCAAGCAAAGCACATTTTCGGCATTCCAACACGGGGAGGTTACATCAGTTAGTAGAACACTTATAGATTTATACGCCGTAAGGACATAGTACGTTTTAGTA 679 5750336 0.971579659 70 613 3762 0.910539216 1.829596129 0.234068627 0.176730486 0.31495098 679 63 10 743 3L:5750070-5750551 7 DnaJ-1 FBtr0077124|FBtr0077123 5750027|5750027 5750588|5750588 AGACTGA 7mer-A1 dme-miR-14-3p 3L - 5750185 5750496 3'utr DnaJ-1 FlyBase G26155.1 TCGTAAGACAACTTAGCCTAACCAATTGTAGCCCTAAGCTAGTGAGTGTGCCAAGCGAAGAGCTGTAGATATTGGCCGAGGATGCAAGCGCTGGATAGGATTAGGAAAGAGAACAACACACACACACACACACACATAAAGCAGCCCGTGTAGCCCGTTTCGTGTTGGAGACTGATCGATTATTAGCTATTTAGCATTACACAAATTCCATAAGTTGTTTTGTTTACCGCCACATGAATCGGTGCCTCAACATCTTATACATAATAATCCCAAAACAAAATATTAAATAAATGAGGTATTATAAATTTAAAG 410 5750337 0.975410799 48 353 2257 0.861685215 2.256878032 0.255961844 0.395121951 0.60572337 410 85 2 542 3L:5750185-5750496 7 179.5 555 FBgn0263106 2505.54 158.3466667 242.02 0.071641243 1.13358875 0.741674242 8 9 8.5 0.5 dme-miR-11-3p 7mer-m1 TGTGATG 3L 576386 576392 + 3L_576386_576392_+ 0.595712864 0.597771063 0.596741963 0.001455367 hipk FBtr0072552 574200 581099 3L + 576102 576567 3'utr hipk FlyBase G26826.1 TCGTAGTTAGAATTAAACTTAACTTTCGCGATAAAATAACCAAGCAGCAACTAATTTTTCGCCCTCCTGGGGTCGATTACTCGGTTGTCCCAACCGAGAATTTATTAAAATCGGTCCTTCGAGGGAGGCACTTCCTATATAATGAATTACATGCTGATACAAAGCAGAAATATTTAAACCATCCTTCGCCCCTTCCTAGATCAGCTGTGTACAGTAGGCTATTTTGGGATCGGGATCGAGATGAATCAACTCCGACGATTGGAAAAGATCTAGCATATAATTATTGTGATGTAGTTTTTAACGAGGAGCAGAGAAGTCCGCAAACGTTTTTTGTCAGTCGTCGTCGTCGTCGTCGGCGAATAGAAATTACCTAAAATTACGAATAACCAATTGCGATACGGATACGGAATATGCATCTATATGTTAACTAATTAGTGTGCAGGATTCAATAGCGTTAGCACGACAA 2062 576384 0.895443614 90 1833 20753 0.89198172 1.553680794 0.374740341 0.143549952 0.266306606 2062 201 59 2147 3L:576102-576567 7 hipk FBtr0072552 574200 581099 TGTGATG 7mer-m1 dme-miR-11-3p 3L + 576212 576418 3'utr hipk FlyBase G20292.1 TCGGTCCTTCGAGGGAGGCACTTCCTATATAATGAATTACATGCTGATACAAAGCAGAAATATTTAAACCATCCTTCGCCCCTTCCTAGATCAGCTGTGTACAGTAGGCTATTTTGGGATCGGGATCGAGATGAATCAACTCCGACGATTGGAAAAGATCTAGCATATAATTATTGTGATGTAGTTTTTAACGAGGAGCAGAGAAGT 1293 576384 0.863780343 34 1041 14107 0.799591002 1.28575173 0.440695297 0.373549884 0.585889571 1293 312 80 1564 3L:576212-576418 7 1390 556 FBgn0035142 10724.84 157.7366667 241.6366667 0.129605663 8.81215528 5.752438234 2 2 2 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 5777529 5777535 - 3L_5777529_5777535_- 0.742344749 0.72905113 0.735697939 0.009399995 Myt1 FBtr0077118|FBtr0077118|FBtr0077118 5777474|5777474|5777474 5777763|5777763|5777763 3L - 5777515 5777584 3'utr Myt1 FlyBase G34629.1 AATGTTAATGCTTCTTTAGAAGAACTTGTTGAACTTGAACATATAATCATGTGATATATATACGAAAAGC 28 5777539 0.853584963 9 23 197 0.921052632 1.243038049 0.184210526 0.25 0.447368421 28 2 1 35 3L:5777515-5777584 7 Myt1 FBtr0077118|FBtr0077118|FBtr0077118 5777474|5777474|5777474 5777763|5777763|5777763 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 5777498 5777555 3'utr Myt1 FlyBase G26181.1 TGAACTTGAACATATAATCATGTGATATATATACGAAAAGCGATTTGAAAAGTTTAAA 21 5777538 0.970630995 7 17 157 0.814814815 1.041392685 0.074074074 0.238095238 0.407407407 21 4 1 22 3L:5777498-5777555 7 19 557 FBgn0040298 171.3866667 10.89333333 16.77 0.110860433 1.744186047 1.132975552 4 3 3.5 0.5 dme-miR-33-5p 7mer-A1 AATGCAA 3L 5812155 5812161 + 3L_5812155_5812161_+ 0.740481157 0.697554918 0.719018038 0.030353478 CG5537 FBtr0310534 5811928 5812228 3L + 5812008 5812208 intron-3'utr CG5537 FlyBase G28303.1 CCTGCGTTGCGCTCCACTAACAAATGCTACCCTCTCTCACTCTGTTTCGTCCTCCAGATTGCATTTGAGACACACAGACAAATAGACGACCCCTGCGGCCAACCAAACTACTACTTAGCAACTGTTAGCTTTTCACAACTGGCTTTTAATGCAACTCTCAAATACGTTACGTTCGTTACGCACTATTGTAAATATAGAAAC 178 5812132 0.991458247 29 170 1114 0.952606635 2.303196057 0.09478673 0.151685393 0.28436019 178 10 0 201 3L:5812008-5812208 7 CG5537 FBtr0310534 5811928 5812228 AATGCAA 7mer-A1 dme-miR-33-5p 3L + 5812042 5812172 intron-3'utr CG5537 FlyBase G21437.1 TCTCACTCTGTTTCGTCCTCCAGATTGCATTTGAGACACACAGACAAATAGACGACCCCTGCGGCCAACCAAACTACTACTTAGCAACTGTTAGCTTTTCACAACTGGCTTTTAATGCAACTCTCAAATAC 100 5812157 0.990433733 16 93 650 0.956521739 2.187520721 0.093167702 0.41 0.633540373 100 7 0 154 3L:5812042-5812172 7 44 558 FBgn0035639 210.32 23.03 35.33333333 0.209205021 1.910551455 1.245283019 23 -2 10.5 0.5 dme-miR-252-5p 7mer-m8 GTACTTA 3L 582937 582943 - 3L_582937_582943_- 0.560741211 0.537739444 0.549240327 0.016264729 Kah FBtr0072563 582822 583983 3L - 582917 583044 3'utr Kah FlyBase G33052.1 CGATTCGACTCGATTCACTCCGATTCGATCTACAGCTCTACAGCTAATCGCACCAAAGATACTTCGATTTAGATGCGCACGCATACTACCTTTATTTACTCGTACTTACCATATACACCAAAAGATAT 70 582951 0.981867481 18 64 470 0.911392405 1.857332496 0.151898734 0.128571429 0.227848101 70 7 0 72 3L:582917-583044 7 Kah FBtr0072563 582822 583983 GTACTTA 7mer-m8 dme-miR-252-5p 3L - 582920 583041 3'utr Kah FlyBase G25000.1 TTCGACTCGATTCACTCCGATTCGATCTACAGCTCTACAGCTAATCGCACCAAAGATACTTCGATTTAGATGCGCACGCATACTACCTTTATTTACTCGTACTTACCATATACACCAAAAGA 62 582951 0.966015266 20 52 398 0.867346939 1.452297671 0.102040816 0.370967742 0.602040816 62 11 2 85 3L:582920-583041 7 4.5 559 FBgn0035144 229 9.92 15.31333333 0.019650655 0.453629032 0.293861559 8 8 8 0.5 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC 3L 583302 583308 - 3L_583302_583308_- 0.587858695 0.593236804 0.590547749 0.003802891 Kah FBtr0072563 582822 583983 3L - 583217 583365 3'utr Kah FlyBase G33054.1 AAGGCATTGATCGGCTTCCTGCTTCCGGCACGGAAGTCGTTCCAAAACGAGAGAATTTCTAGTCTTTATATTTAAATAAAGCGCACATTTGGCGAGATCGGGAGCATTCCCGATCCCATCCCCTTTTGTGCGTGGCGTTACTTTAAGCA 267 583309 0.864403061 18 255 2569 0.952229299 2.174641193 0.544585987 0.119850187 0.251592357 267 14 1 299 3L:583217-583365 7 Kah FBtr0072563 582822 583983 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" 3L - 583279 583327 3'utr Kah FlyBase G25003.1 GTTCCAAAACGAGAGAATTTCTAGTCTTTATATTTAAATAAAGCGCACA 180 583309 0.988777763 10 169 1757 0.948412698 1.679427897 0.511904762 0.3 0.5 180 9 4 239 3L:583279-583327 7 207.5 560 FBgn0035144 229 9.92 15.31333333 0.906113537 20.91733871 13.55028298 1 1 1 0.5 dme-miR-184-5p 6mer3-8 TGATAA 3L 583807 583812 - 3L_583807_583812_- 0.407888269 0.500548041 0.454218155 0.065520302 Kah FBtr0072563 582822 583983 3L - 583749 583892 3'utr Kah FlyBase G33056.1 TGCCACTTAATCCAAGTCCTTTCACAGCCCACCAGCCACCACCAATCCAGGACATTTTCTTACTGTAGTCAACGAATATGTGATAATAATGCAAAAGAGCTAAAGTACCATTAGAGAGTAGATGATTCCAGAGCAAAGAGGAGC 148 583816 0.972201018 22 142 839 0.966292135 1.934498451 0.179775281 0.155405405 0.297752809 148 5 1 172 3L:583749-583892 6 Kah FBtr0072563 582822 583983 TGATAA 6mer3-8 dme-miR-184-5p 3L - 583755 583844 3'utr Kah FlyBase G25008.1 AGGACATTTTCTTACTGTAGTCAACGAATATGTGATAATAATGCAAAAGAGCTAAAGTACCATTAGAGAGTAGATGATTCCAGAGCAAAG 80 583816 0.721174301 13 74 436 0.938596491 1.552262523 0.192982456 0.3125 0.51754386 80 5 2 107 3L:583755-583844 6 82 561 FBgn0035144 229 9.92 15.31333333 0.358078603 8.266129032 5.354810623 4 4 4 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 6096463 6096469 + 3L_6096463_6096469_+ 0.637720883 0.636702898 0.637211891 0.000719835 loj FBtr0301446|FBtr0301446|FBtr0301446|FBtr0301447|FBtr0301447|FBtr0301447|FBtr0301448|FBtr0301448|FBtr0301448 6096261|6096261|6096261|6096261|6096261|6096261|6096261|6096261|6096261 6096517|6096517|6096517|6096517|6096517|6096517|6096517|6096517|6096517 3L + 6096368 6096486 3'utr loj FlyBase G28326.1 ATTTTATCACTGGCTAATTGATCAAGCGCAACTGAGCAGACTTTTTTATAATTGGGACTACTTATGTCATACGAGTTATAGACAGCAAAACTTATTGTGATAAGTGTACATTTGTGTGT 291 6096461 0.983343739 20 277 2110 0.95923913 1.50638202 0.41576087 0.223367698 0.385869565 291 5 10 353 3L:6096368-6096486 7 loj FBtr0301447|FBtr0301447|FBtr0301447|FBtr0301448|FBtr0301448|FBtr0301448|FBtr0301446|FBtr0301446|FBtr0301446 6096261|6096261|6096261|6096261|6096261|6096261|6096261|6096261|6096261 6096517|6096517|6096517|6096517|6096517|6096517|6096517|6096517|6096517 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 6096386 6096480 3'utr loj FlyBase G21456.1 TGATCAAGCGCAACTGAGCAGACTTTTTTATAATTGGGACTACTTATGTCATACGAGTTATAGACAGCAAAACTTATTGTGATAAGTGTACATTT 197 6096461 0.771146132 16 181 1386 0.935153584 1.437750563 0.464163823 0.370558376 0.576791809 197 10 9 274 3L:6096386-6096480 7 144.5 562 FBgn0061492 141.6666667 16.32666667 25.11333333 1.02 8.850551245 5.753915583 2 2 2 0.5 dme-miR-12-5p 7mer-m8 AATACTC 3L 6169335 6169341 - 3L_6169335_6169341_- 0.661584839 0.666164595 0.663874717 0.003238408 CG10289 FBtr0331790|FBtr0077019 6164914|6167311 6169800|6169800 3L - 6169256 6169403 3'utr CG10289 FlyBase G34702.1 AAGAAAACTGTATTTTGTTTGTAATATGTATTAGTCTGTCGATTTAGTACGCTTTTACTTTCAATACTCTCAATGTGTTAGGCAACCTATGAGCATTACTTAAAGTACCAAAATTCACGCAACGTTTAGAATGCTTAGTTTATATTTG 47 6169348 0.98962322 17 43 418 0.909090909 1.397940009 0.181818182 0.14893617 0.272727273 47 4 1 50 3L:6169256-6169403 7 CG10289 FBtr0077019|FBtr0331790 6167311|6164914 6169800|6169800 AATACTC 7mer-m8 dme-miR-12-5p 3L - 6169302 6169366 3'utr CG10289 FlyBase G26239.1 GTCGATTTAGTACGCTTTTACTTTCAATACTCTCAATGTGTTAGGCAACCTATGAGCATTACTTA 14 6169339 0.988631932 5 10 124 0.8 1 0.4 0.428571429 0.68 14 4 1 20 3L:6169302-6169366 7 13.5 563 FBgn0035688 1894.98 44.00666667 67.31 0.007124086 0.306771701 0.200564552 7 -2 2.5 0.5 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 6178851 6178857 + 3L_6178851_6178857_+ 0.590357248 0.612633645 0.601495446 0.015751794 CG7376 FBtr0331788 6178643 6178941 3L + 6178828 6178883 3'utr CG7376 FlyBase G28336.1 AAGTCGAATTCACATAGGTATTCTGTGTTCTCCTGAATAATGTACAGTATTATTTG 7 6178854 0.984311664 5 7 64 1 1.041392685 0.454545455 0.428571429 0.636363636 7 0 0 11 3L:6178828-6178883 7 CG7376 FBtr0331788 6178643 6178941 TGTGTTC 7mer-m8 dme-miR-317-3p 3L + 6178833 6178883 3'utr CG7376 FlyBase G21459.1 GAATTCACATAGGTATTCTGTGTTCTCCTGAATAATGTACAGTATTATTTG 7 6178848 0.990218748 6 7 68 1 1.041392685 0.363636364 0.428571429 0.636363636 7 0 0 11 3L:6178833-6178883 7 5.5 564 FBgn0035689 292.97 8.566666667 13.15333333 0.018773253 0.642023346 0.418144957 -3 3 0 0.5 dme-bantam-3p 6mer3-8 TGATCT 3L 6182276 6182281 - 3L_6182276_6182281_- 0.913066353 0.834412592 0.873739472 0.055616635 D19B FBtr0077017 6182174 6182416 3L - 6182243 6182307 3'utr D19B FlyBase G34732.1 CAACTAGTTTTCGTCACTTTGCAATTTGATCTTTTTTGTATTTAAATCCCCCCTTTAAACTGCTT 55 6182282 0.791990291 12 53 692 0.96969697 1.806179974 0.121212121 0.181818182 0.318181818 55 2 0 64 3L:6182243-6182307 6 D19B FBtr0077017 6182174 6182416 TGATCT 6mer3-8 dme-bantam-3p 3L - 6182234 6182299 3'utr D19B FlyBase G26262.1 TTTCGTCACTTTGCAATTTGATCTTTTTTGTATTTAAATCCCCCCTTTAAACTGCTTAAGTTTGTA 39 6182282 0.988137582 9 36 452 0.942307692 1.69019608 0.019230769 0.282051282 0.461538462 39 3 0 49 3L:6182234-6182299 6 41 565 FBgn0022699 264.21 11.84 18.04333333 0.155179592 3.462837838 2.272307408 1 1 1 0.5 dme-miR-33-5p 7mer-m8 CAATGCA 3L 6186303 6186309 - 3L_6186303_6186309_- 0.42549375 0.399524546 0.412509148 0.018362997 D19A FBtr0077016 6185828 6186380 3L - 6186221 6186409 stop_codon D19A FlyBase G34743.1 TGGATGCCCTGAAGATCGACCACGTCTAGGCAGCAGGATTGGCTTTACTTTACTAGCATATATGCATCATAACCTAGCCACATCCATATGTATCCACTTCCAATGCAGCTGACACTGTCCGGAAAAGTTGTAGGCATGCCTCGAATTGCTCTCTAGCTGGATCAGATTGTAGGTTTATAGGCACTCCAG 89 6186306 0.975116679 19 88 566 0.990566038 2.021189299 0.141509434 0.168539326 0.301886792 89 1 0 105 3L:6186221-6186409 7 D19A FBtr0077016 6185828 6186380 CAATGCA 7mer-m8 dme-miR-33-5p 3L - 6186220 6186322 3'utr D19A FlyBase G26267.1 ATGTATCCACTTCCAATGCAGCTGACACTGTCCGGAAAAGTTGTAGGCATGCCTCGAATTGCTCTCTAGCTGGATCAGATTGTAGGTTTATAGGCACTCCAGA 39 6186306 0.927633539 10 38 257 0.983606557 1.77815125 0.213114754 0.435897436 0.639344262 39 1 0 60 3L:6186220-6186322 7 29 566 FBgn0022935 233.1233333 8.756666667 13.45 0.124397672 3.311762467 2.156133829 -3 -3 -3 0.5 dme-miR-986-5p 7mer-m8 ATTCGAG 3L 657921 657927 + 3L_657921_657927_+ 0.569085481 0.562665554 0.565875518 0.004539555 Rev1 FBtr0072557 657793 657971 3L + 657848 657957 3'utr Rev1 FlyBase G26877.1 TAATGTAACGCCAAGCTATGAATGCGGCCAGCTGATAATGTTAATGAGCCATTAGTTTATAAGCCATCCATTAATTCGAGCCAAAAATAAAACATTCTGGTAAAGAAAAT 60 657921 0.982377421 15 47 355 0.763157895 1.161368002 0.065789474 0.166666667 0.342105263 60 15 3 58 3L:657848-657957 7 Rev1 FBtr0072557 657793 657971 ATTCGAG 7mer-m8 dme-miR-986-5p 3L + 657841 657938 3'utr Rev1 FlyBase G20338.1 ATTATAATAATGTAACGCCAAGCTATGAATGCGGCCAGCTGATAATGTTAATGAGCCATTAGTTTATAAGCCATCCATTAATTCGAGCCAAAAATAAA 42 657920 0.980466558 13 34 240 0.828125 1.72427587 0.078125 0.380952381 0.59375 42 11 0 53 3L:657841-657938 7 23.5 567 FBgn0035150 1798.706667 67.56666667 104.0266667 0.013064943 0.347804637 0.225903614 0 1 0.5 0.5 dme-miR-31a-5p 6mer3-8 TCTTGC 3L 6952884 6952889 - 3L_6952884_6952889_- 0.524720286 0.882278367 0.703499326 0.252831757 CG10077 FBtr0300937 6951802 6953758 3L - 6952775 6952963 3'utr CG10077 FlyBase G34903.1 AATGAGGGGAATGTGTTTGTTCTCCATGCATTGCTGGTTATATGATGTTGTTACTTTTAGTTCGTTTGTTGCTCTCTTGCTCATAGTTTTTAGTTGTGTCTCGTCAATCACATTTTGAGTAACTTAATTGTAAAAAAGCGATTTACTGTCAGTCAAGGAGTCAATGGCCAGCAAAATAATCTTAAAACA 29 6952886 0.992061641 17 25 293 0.9 1.431363764 0.066666667 0.034482759 0.066666667 29 3 0 27 3L:6952775-6952963 6 CG10077 FBtr0300937 6951802 6953758 TCTTGC 6mer3-8 dme-miR-31a-5p 3L - 6952839 6952926 3'utr CG10077 FlyBase G26412.1 TTATATGATGTTGTTACTTTTAGTTCGTTTGTTGCTCTCTTGCTCATAGTTTTTAGTTGTGTCTCGTCAATCACATTTTGAGTAACTT 11 6952886 0.992110176 8 11 120 1 1.146128036 0.071428571 0.181818182 0.357142857 11 0 0 14 3L:6952839-6952926 6 9 568 FBgn0035720 1853.276667 63.62 96.59333333 0.004856264 0.141464948 0.093174132 -3 -3 -3 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 7123385 7123390 - 3L_7123385_7123390_- 0.729423879 0.714859348 0.722141613 0.010298727 msl-3 FBtr0076926|FBtr0076926|FBtr0076926 7123211|7123211|7123211 7123532|7123532|7123532 3L - 7123373 7123404 3'utr msl-3 FlyBase G34937.1 AAAAAGTTTCCTAATGTGATCGTATAATCGAA 10 7123397 0.658593152 5 10 81 1 1.146128036 0.071428571 0.3 0.5 10 0 0 14 3L:7123373-7123404 6 msl-3 FBtr0076926|FBtr0076926|FBtr0076926 7123211|7123211|7123211 7123532|7123532|7123532 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L - 7123362 7123405 3'utr msl-3 FlyBase G26438.1 AAAAAAGTTTCCTAATGTGATCGTATAATCGAATAATGCCTATA 5 7123395 0.989834517 3 4 43 0.833333333 0.698970004 0 0.2 0.333333333 5 1 0 5 3L:7123362-7123405 6 7.5 569 FBgn0002775 342.2933333 21.25 32.62333333 0.021911031 0.352941176 0.229896802 7 5 6 0.5 dme-miR-252-5p 7mer-m8 GTACTTA 3L 7333319 7333325 + 3L_7333319_7333325_+ 0.525352431 0.395541684 0.460447057 0.091790026 CG42307 FBtr0299691|FBtr0344452|FBtr0299692 7329590|7329590|7329590 7333471|7333471|7333471 3L + 7333296 7333383 3'utr CG42307 FlyBase G28431.1 TCTACAAGTTATGGAATTTCATTGTACTTATACCTAACTTTGAATGCATTGAATTATTTTCTAGTATTTACCTTATATTGTATTATTG 15 7333318 0.809788193 7 13 157 0.875 1.146128036 0.25 0.066666667 0.125 15 2 0 14 3L:7333296-7333383 7 CG42307 FBtr0299692|FBtr0344452|FBtr0299691 7329590|7329590|7329590 7333471|7333471|7333471 GTACTTA 7mer-m8 dme-miR-252-5p 3L + 7333306 7333365 3'utr CG42307 FlyBase G21516.1 ATGGAATTTCATTGTACTTATACCTAACTTTGAATGCATTGAATTATTTTCTAGTATTTA 12 7333318 0.991224745 4 10 108 0.888888889 1.204119983 0.055555556 0.416666667 0.611111111 12 2 0 16 3L:7333306-7333365 7 9 570 FBgn0259203 453.5333333 57.31 87.29333333 0.019844186 0.157040656 0.103100657 1 1 1 0.5 dme-miR-304-5p 7mer-m8 TGAGATT 3L 7352547 7352553 + 3L_7352547_7352553_+ 0.612528162 0.618601887 0.615565025 0.004294754 qm FBtr0332729|FBtr0076846|FBtr0302045 7352392|7352392|7352392 7353622|7353622|7353622 3L + 7352526 7352567 5'utr qm FlyBase G28446.1 CTGCAGAAGCTGAAGATATTCTGAGATTTATGTTACCCTTTG 19 7352544 0.706644077 5 16 162 0.954545455 1.322219295 0.181818182 0.157894737 0.272727273 19 1 0 21 3L:7352526-7352567 7 qm FBtr0076846|FBtr0302045|FBtr0332729 7352392|7352392|7352392 7353622|7353622|7353622 TGAGATT 7mer-m8 dme-miR-304-5p 3L + 7352530 7352562 5'utr qm FlyBase G21526.1 AGAAGCTGAAGATATTCTGAGATTTATGTTACC 9 7352544 0.578140011 6 9 72 1 1.079181246 0 0.333333333 0.5 9 0 0 12 3L:7352530-7352562 7 12.5 571 FBgn0019662 681.67 36.89 56.62 0.018337319 0.338845216 0.220770046 3 3 3 0.5 dme-miR-283-5p 8mer-m1 TGATATTT 3L 7374497 7374504 - 3L_7374497_7374504_- 0.470186255 0.457319541 0.463752898 0.009098202 SMSr FBtr0076870 7374048 7374593 3L - 7374434 7374536 3'utr SMSr FlyBase G35059.1 AAAGCAAACATGCAGAAACTAACCATACCGACTGATATTTTTATTTCGAAATTTCCATCGATCCCCTTCCTTTCACAGCTCTCCCCTGTATTATTGACAGCAT 85 7374501 0.74484519 15 78 602 0.923913043 1.452297671 0.141304348 0.070588235 0.141304348 85 5 2 85 3L:7374434-7374536 8 SMSr FBtr0076870 7374048 7374593 TGATATTT 8mer-m1 dme-miR-283-5p 3L - 7374487 7374548 3'utr SMSr FlyBase G26530.2 GTCGCTCTTCGAAAAGCAAACATGCAGAAACTAACCATACCGACTGATATTTTTATTTCGAA 40 7374511 0.976968592 5 36 228 0.964285714 1.73239376 0.071428571 0.375 0.553571429 40 2 0 54 3L:7374487-7374548 8 49.5 572 FBgn0052380 477.4766667 22.27333333 34.04333333 0.103669987 2.222388506 1.454029178 -3 7 2 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-m8 CTGTGAT 3L 753253 753259 + 3L_753253_753259_+ 0.622846307 0.600996172 0.61192124 0.015450354 emc FBtr0072578|FBtr0072578|FBtr0072578 752306|752306|752306 753492|753492|753492 3L + 753227 753288 3'utr emc FlyBase G26889.1 CCTATAAATATATATTAATATATGTTCTGTGATCTGTAGCATACTTTGTACAAAGTGTTTTT 1016 753260 0.66567851 18 959 10456 0.947533281 1.827512865 0.247454973 0.203740157 0.366483947 1016 50 17 1210 3L:753227-753288 7 emc FBtr0072578|FBtr0072578|FBtr0072578 752306|752306|752306 753492|753492|753492 CTGTGAT 7mer-m8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 753224 753287 3'utr emc FlyBase G20350.1 AAACCTATAAATATATATTAATATATGTTCTGTGATCTGTAGCATACTTTGTACAAAGTGTTTT 771 753261 0.715575089 17 727 7850 0.942783945 1.812520152 0.222886422 0.367055772 0.583262169 771 51 16 1104 3L:753224-753287 7 863 573 FBgn0000575 1770.966667 105.6933333 162.6966667 0.487304485 8.165131828 5.304349608 -7 -8 -7.5 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3L 7972314 7972319 + 3L_7972314_7972319_+ 0.912379104 0.793169591 0.852774347 0.084293846 RNaseX25 FBtr0076752|FBtr0076752|FBtr0076752 7971844|7971844|7971844 7972449|7972449|7972449 3L + 7972295 7972325 3'utr RNaseX25 FlyBase G28552.1 AAACTCATATATACTATTTCTGTGACGATTA 6 7972311 0.722315116 2 6 61 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 3L:7972295-7972325 6 RNaseX25 FBtr0076752|FBtr0076752|FBtr0076752 7971844|7971844|7971844 7972449|7972449|7972449 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 7972302 7972337 3'utr RNaseX25 FlyBase G21608.1 TATATACTATTTCTGTGACGATTACCTAATTGTTCT 5 7972323 0.855476523 2 4 46 0.833333333 0.698970004 0 0.2 0.333333333 5 1 0 5 3L:7972302-7972337 6 5.5 574 FBgn0010406 524.1133333 38.16 57.97666667 0.010493914 0.144129979 0.094865751 3 -9 -3 0.5 dme-miR-304-5p 7mer-m8 TGAGATT 3L 7977838 7977844 - 3L_7977838_7977844_- 0.595329966 0.618518268 0.606924117 0.016396604 CG8038 FBtr0076763 7977803 7977984 3L - 7977805 7977983 3'utr CG8038 FlyBase G35208.1 AACTACAGGACCAATCATTAGCCATAGAAATTGAATCCTATTGTAATTTAAGGAAAAAAGTTTATTGGAAAGTTAGCATCGCTTTTCAATAGAAATTTAATAATTGCCCTCAAAGATCCTCTAAAACTTTACTTGTATTTGAGATTGTTGTGTTTAATATATATATAAAACCGTACATT 34 7977845 0.988159393 21 32 302 0.909090909 1.124938737 0.159090909 0.205882353 0.386363636 34 2 2 40 3L:7977805-7977983 7 CG8038 FBtr0076763 7977803 7977984 TGAGATT 7mer-m8 dme-miR-304-5p 3L - 7977810 7977882 3'utr CG8038 FlyBase G26638.1 AATTGCCCTCAAAGATCCTCTAAAACTTTACTTGTATTTGAGATTGTTGTGTTTAATATATATATAAAACCGT 16 7977846 0.986385513 10 16 142 1 1.414973348 0.153846154 0.5 0.692307692 16 0 0 26 3L:7977810-7977882 7 11.5 575 FBgn0035831 191 28.52666667 43.6 0.060209424 0.403131573 0.263761468 1 2 1.5 0.5 dme-miR-980-3p 7mer-A1 GCAGCTA 3L 8106012 8106018 + 3L_8106012_8106018_+ 0.51282526 0.511117207 0.511971233 0.001207809 Ect4 FBtr0304994 8105751 8108836 3L + 8105885 8106045 3'utr Ect4 FlyBase G28597.1 ACTTTCTCACTCAACTCAAGCAACCCATTACAACTACACTATCCATTACTCTTTACTCTTACCAATTAATAATTGATTTAATTCTGATTGCCACACACTCGAAATCGCTTGAAACGCCGTCTCATGCGCAGCTAATCACCAGGCAAATAGGTACCGCCAAT 55 8106009 0.913930648 15 52 347 0.951612903 1.469822016 0.080645161 0.109090909 0.209677419 55 2 1 59 3L:8105885-8106045 7 Ect4 FBtr0304994 8105751 8108836 GCAGCTA 7mer-A1 dme-miR-980-3p 3L + 8105885 8106039 3'utr Ect4 FlyBase G21643.1 ACTTTCTCACTCAACTCAAGCAACCCATTACAACTACACTATCCATTACTCTTTACTCTTACCAATTAATAATTGATTTAATTCTGATTGCCACACACTCGAAATCGCTTGAAACGCCGTCTCATGCGCAGCTAATCACCAGGCAAATAGGTACC 34 8106009 0.987127491 16 28 244 0.777777778 1.544068044 0.155555556 0.303030303 0.488888889 33 10 0 35 3L:8105885-8106039 7 15 576 FBgn0262579 2855.543333 63.41666667 97.15666667 0.005252941 0.23653088 0.154389817 3 3 3 0.5 dme-miR-317-3p 6mer3-8 TGTGTT 3L 8123643 8123648 - 3L_8123643_8123648_- 0.783308532 0.896863476 0.840086004 0.080295511 CG7550 FBtr0076736 8123610 8123736 3L - 8123630 8123668 3'utr CG7550 FlyBase G35244.1 CGTATCAGCCAAGTATCTTCTGTGTTATTTAAATAAAAT 16 8123650 0.65486311 8 14 177 0.875 0.669006781 0.0625 0 0 16 0 2 14 3L:8123630-8123668 6 CG7550 FBtr0076736 8123610 8123736 TGTGTT 6mer3-8 dme-miR-317-3p 3L - 8123630 8123664 3'utr CG7550 FlyBase G26668.1 TCAGCCAAGTATCTTCTGTGTTATTTAAATAAAAT 9 8123650 0.613164019 6 8 89 0.714285714 1 0.285714286 0.333333333 0.571428571 9 4 0 10 3L:8123630-8123664 6 12.5 577 FBgn0035839 38.33333333 5.32 8.246666667 0.326086957 2.34962406 1.515763945 2 2 2 0.5 dme-miR-33-5p 6mer3-8 CAATGC 3L 8131378 8131383 + 3L_8131378_8131383_+ 0.539687212 0.618806939 0.579247075 0.055946076 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 3L + 8131314 8131406 3'utr CdsA FlyBase G28659.1 AGCGCATTTTAGTTAAATACCTGAGGGACGAAATTATGAGATCAAGATACCAGGAAAACTCTTGCAATGCTGTAATTCTATATATAATAGTGC 56 8131381 0.776535826 11 52 343 0.944444444 1.832508913 0.166666667 0.25 0.416666667 56 4 0 68 3L:8131314-8131406 6 CdsA FBtr0076688|FBtr0346546 8130832|8130832 8131675|8131675 CAATGC 6mer3-8 dme-miR-33-5p 3L + 8131283 8131409 3'utr CdsA FlyBase G21699.1 AACGCCAGAATCTGGAGATTAGCATAATTAAAGCGCATTTTAGTTAAATACCTGAGGGACGAAATTATGAGATCAAGATACCAGGAAAACTCTTGCAATGCTGTAATTCTATATATAATAGTGCAAT 31 8131381 0.925496026 17 30 216 0.972222222 1.544068044 0.111111111 0.161290323 0.277777778 31 1 0 35 3L:8131283-8131409 6 18.5 578 FBgn0010350 708.1033333 35.43 53.93 0.02612613 0.522156365 0.343037271 -3 -3 -3 0.5 dme-miR-14-3p 6mer2-7 AGACTG 3L 8131653 8131658 - 3L_8131653_8131658_- 0.990025603 0.992510524 0.991268064 0.00175709 CG7504 FBtr0273367|FBtr0273368 8131427|8131427 8131796|8131796 3L - 8131618 8131696 3'utr CG7504 FlyBase G35266.1 AAAAAAGGCTTTGTTATTTTTATATATATTTAACATAGAGACTGTAAGATTTAATATTGAAATCTTTGTACATTTAGTT 29 8131654 0.987865704 10 27 243 0.933333333 1.447158031 0.066666667 0.034482759 0.066666667 29 2 0 28 3L:8131618-8131696 6 CG7504 FBtr0273367|FBtr0273368 8131427|8131427 8131796|8131796 AGACTG 6mer2-7 dme-miR-14-3p 3L - 8131556 8131679 3'utr CG7504 FlyBase G26681.1 TTTTATATATATTTAACATAGAGACTGTAAGATTTAATATTGAAATCTTTGTACATTTAGTTCTTTAAAACGCCGACGAATTGCATTTTCGTTCTTAAATGCCGTACAGTATAACAGGATTTAT 31 8131654 0.98514446 10 27 227 0.888888889 1.602059991 0.111111111 0.290322581 0.511111111 31 5 0 40 3L:8131556-8131679 6 22.5 579 FBgn0035842 670.3266667 14.32333333 21.90333333 0.033565724 1.570863393 1.027240907 -4 -4 -4 0.5 dme-miR-34-5p 6mer2-7 ACTGCC 3L 826829 826834 - 3L_826829_826834_- 0.609533111 0.648490165 0.629011638 0.02754683 CG13900 FBtr0331404|FBtr0072597 826718|826718 830720|827877 3L - 826717 826874 3'utr CG13900 FlyBase G33124.1 ATACTAACTGCACATTAAATCACCGATCAACCACTAATCGACTGCCGCATATTTAAACTAGCATATAAGTCAGTGCAAACTCGACAAATTGCACAACCTAAATATAAACCCCTAATCATAAGCAATTTTTAACTTAAATAAAAGTAACTGAAAACAAA 753 826837 0.772646782 25 721 3085 0.959954233 1.923761961 0.177345538 0.139442231 0.258581236 753 26 9 839 3L:826717-826874 6 CG13900 FBtr0072597|FBtr0331404 826718|826718 827877|830720 ACTGCC 6mer2-7 dme-miR-34-5p 3L - 826751 826872 3'utr CG13900 FlyBase G25063.1 ACTAACTGCACATTAAATCACCGATCAACCACTAATCGACTGCCGCATATTTAAACTAGCATATAAGTCAGTGCAAACTCGACAAATTGCACAACCTAAATATAAACCCCTAATCATAAGCA 388 826838 0.947575908 17 359 1522 0.928455285 1.853546121 0.22601626 0.412371134 0.629268293 388 37 7 571 3L:826751-826872 6 515 580 FBgn0035162 4015.156667 113.57 173.3966667 0.128263986 4.534648235 2.970068629 3 4 3.5 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3L 8298258 8298263 + 3L_8298258_8298263_+ 0.63498356 0.601225872 0.618104716 0.023870299 Rab19 FBtr0076705|FBtr0076705|FBtr0076705|FBtr0331832|FBtr0331832|FBtr0331832 8298223|8298223|8298223|8298223|8298223|8298223 8298506|8298506|8298506|8298506|8298506|8298506 3L + 8298192 8298309 stop_codon Rab19 FlyBase G28696.1 AAGAGTTGCAGCAGCTCATGCAATCTCACCTAGACCTAAATCCGCTCTTTAGTTTGCTTTTACTTTTGTGATCAAATTGTTCTTGTGGCTATATATTAGTATTCTAATGCTTTAACCT 91 8298256 0.960949404 17 82 1009 0.901960784 1.361727836 0.156862745 0.10989011 0.205882353 91 7 3 92 3L:8298192-8298309 6 Rab19 FBtr0331832|FBtr0331832|FBtr0331832|FBtr0076705|FBtr0076705|FBtr0076705 8298223|8298223|8298223|8298223|8298223|8298223 8298506|8298506|8298506|8298506|8298506|8298506 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 8298234 8298301 3'utr Rab19 FlyBase G21730.1 CGCTCTTTAGTTTGCTTTTACTTTTGTGATCAAATTGTTCTTGTGGCTATATATTAGTATTCTAATGC 69 8298256 0.714657309 12 68 762 0.989795918 1.685741739 0.183673469 0.31884058 0.520408163 69 0 1 97 3L:8298234-8298301 6 63.5 581 FBgn0015793 126.0033333 15.34 23.52333333 0.503954922 4.139504563 2.699447357 2 2 2 0.5 dme-miR-13b-2-5p 8mer-A1 TTTGACGA 3L 8298349 8298356 + 3L_8298349_8298356_+ 0.586299403 0.600503173 0.593401288 0.010043603 Rab19 FBtr0076705|FBtr0331832 8298223|8298223 8298506|8298506 3L + 8298342 8298375 3'utr Rab19 FlyBase G28697.1 ATTTATTTTTGACGATAGAGTACAAACAATCTCA 5 8298356 0.777445187 3 5 28 1 0.77815125 0.166666667 0.2 0.333333333 5 0 0 6 3L:8298342-8298375 8 Rab19 FBtr0331832|FBtr0076705 8298223|8298223 8298506|8298506 TTTGACGA 8mer-A1 dme-miR-13b-2-5p 3L + 8298315 8298379 3'utr Rab19 FlyBase G21731.1 TAGACACTAACTTTTACACAACCATGTATTTATTTTTGACGATAGAGTACAAACAATCTCACACA 7 8298351 0.98568958 6 6 56 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 3L:8298315-8298379 8 5 582 FBgn0015793 126.0033333 15.34 23.52333333 0.03968149 0.325945241 0.21255491 -7 -2 -4.5 0.5 dme-miR-184-3p 8mer-A1 TCCGTCCA 3L 8407329 8407336 - 3L_8407329_8407336_- 0.616688025 0.617858633 0.617273329 0.000827739 Oseg1 FBtr0345038|FBtr0076663 8407266|8407266 8407370|8407370 3L - 8407307 8407360 3'utr Oseg1 FlyBase G35375.1 AGAAGTGTGTGCAAATATATAATTTCCGTCCAAAACTGTACAAATAGGAACTAT 123 8407337 0.721228656 3 123 872 1 2.167317335 0.040816327 0.146341463 0.285714286 123 0 0 147 3L:8407307-8407360 8 Oseg1 FBtr0076663|FBtr0345038 8407266|8407266 8407370|8407370 TCCGTCCA 8mer-A1 dme-miR-184-3p 3L - 8407305 8407358 3'utr Oseg1 FlyBase G26767.1 AAGTGTGTGCAAATATATAATTTCCGTCCAAAACTGTACAAATAGGAACTATAC 99 8407337 0.701736893 5 96 665 0.964788732 2.136720567 0.070422535 0.333333333 0.535211268 99 5 0 137 3L:8407305-8407358 8 111 583 FBgn0265102 118.8066667 3.826666667 5.82 0.934291005 29.00696864 19.07216495 1 1 1 0.5 dme-miR-970-3p 8mer-A1 TCTTATGA 3L 8427483 8427490 + 3L_8427483_8427490_+ 0.603636587 0.619054013 0.6113453 0.010901748 Cbl FBtr0076614 8427408 8428655 3L + 8427401 8427581 lincRNA_exon-lincRNA_intron Cbl FlyBase G28745.1 GAGGTATAGTTTTGTTCACAGCCTGATCAGCCTGATCCGCCTGCTCCGCTGCCGCCTGTGCTGCTATTTATATACATATTACTCTTATGATTACCTTTGGTTCGTTTATACAGTTATATATGCCTATATATACATTATATATTTTAGATTTTACAACTGCTATTGTTTATATAAGTTTAAT 61 8427491 0.987756108 26 59 536 0.971014493 1.348953548 0.15942029 0.098360656 0.202898551 61 0 2 67 3L:8427401-8427581 8 Cbl FBtr0076614 8427408 8428655 TCTTATGA 8mer-A1 dme-miR-970-3p 3L + 8427406 8427504 stop_codon Cbl FlyBase G21771.1 ATAGTTTTGTTCACAGCCTGATCAGCCTGATCCGCCTGCTCCGCTGCCGCCTGTGCTGCTATTTATATACATATTACTCTTATGATTACCTTTGGTTCG 35 8427497 0.989904453 16 31 305 0.884615385 1.185636577 0.096153846 0.342857143 0.557692308 35 4 2 46 3L:8427406-8427504 8 21.5 584 FBgn0020224 1487.473333 60.45 92.97666667 0.014454041 0.35566584 0.231240813 -8 -14 -11 0.5 dme-miR-14-3p 7mer-m8 AAGACTG 3L 8428258 8428264 + 3L_8428258_8428264_+ 0.472006826 0.565017987 0.518512406 0.06576885 Cbl FBtr0076614 8427408 8428655 3L + 8428231 8428285 3'utr Cbl FlyBase G28749.1 ATTTGTAAGCAGCCAACGCGCTGCCCTAAGACTGTAATTTATTATTAACAAAAAA 68 8428257 0.800300049 9 55 480 0.805194805 0.83814918 0 0.132352941 0.233766234 68 7 8 62 3L:8428231-8428285 7 Cbl FBtr0076614 8427408 8428655 AAGACTG 7mer-m8 dme-miR-14-3p 3L + 8428234 8428287 3'utr Cbl FlyBase G21774.1 TGTAAGCAGCCAACGCGCTGCCCTAAGACTGTAATTTATTATTAACAAAAAAAA 48 8428257 0.76662485 10 40 309 0.824324324 1.183269844 0 0.333333333 0.567567568 48 10 3 61 3L:8428234-8428287 7 56 585 FBgn0020224 1487.473333 60.45 92.97666667 0.037647734 0.926385443 0.602301653 1 1 1 0.5 dme-miR-317-3p 8mer-A1 TGTGTTCA 3L 8470858 8470865 + 3L_8470858_8470865_+ 0.521821644 0.515183606 0.518502625 0.004693775 Gug FBtr0305699|FBtr0076618|FBtr0305696|FBtr0305697|FBtr0305698|FBtr0076616|FBtr0333048|FBtr0076619 8470769|8470769|8470769|8470769|8470769|8470769|8470769|8470769 8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669 3L + 8470756 8470887 stop_codon Gug FlyBase G28769.1 CAACGGCCCAGATAAGTGGACAGACAGCAATTGTAGAGAGCAAGCAACTGAACAAAGACAATACTCGGGCCGCGGCCGTGAGGAACTGCTTTGTGTGATTTTTGTGTTCAAGCGTTTACATTTTGTTTTCCA 92 8470857 0.974565337 18 86 533 0.930434783 2.029383778 0.32173913 0.195652174 0.356521739 92 8 0 107 3L:8470756-8470887 8 Gug FBtr0076619|FBtr0076616|FBtr0333048|FBtr0305697|FBtr0305698|FBtr0305699|FBtr0076618|FBtr0305696 8470769|8470769|8470769|8470769|8470769|8470769|8470769|8470769 8472669|8472669|8472669|8472669|8472669|8472669|8472669|8472669 TGTGTTCA 8mer-A1 dme-miR-317-3p 3L + 8470784 8470875 3'utr Gug FlyBase G21793.1 AATTGTAGAGAGCAAGCAACTGAACAAAGACAATACTCGGGCCGCGGCCGTGAGGAACTGCTTTGTGTGATTTTTGTGTTCAAGCGTTTACA 45 8470857 0.962856331 9 40 254 0.873239437 1.792391689 0.169014085 0.444444444 0.647887324 45 9 0 62 3L:8470784-8470875 8 28 586 FBgn0010825 1916.706667 26.53 40.64 0.014608391 1.055408971 0.688976378 1 1 1 0.5 dme-miR-1007-3p 7mer-A1 GAGCTTA 3L 8567694 8567700 + 3L_8567694_8567700_+ 0.78430552 0.813282942 0.798794231 0.020490116 rhea FBtr0333109 8564005 8574409 3L + 8567667 8567706 3'utr rhea FlyBase G28853.1 AGTGGCCAGACGATGAACTCTGCTTCCGAGCTTATTGACA 6 8567701 0.815675635 5 5 43 0.833333333 0.698970004 0.166666667 0 0 6 1 0 5 3L:8567667-8567706 7 rhea FBtr0333109 8564005 8574409 GAGCTTA 7mer-A1 dme-miR-1007-3p 3L + 8567652 8567711 3'utr rhea FlyBase G21851.1 AACTTGCATGGATTCAGTGGCCAGACGATGAACTCTGCTTCCGAGCTTATTGACAAACTG 5 8567690 0.972506348 4 5 31 1 0.84509804 0.285714286 0.2 0.428571429 5 0 0 7 3L:8567652-8567711 7 4 587 FBgn0260442 4425.776667 56.13 85.46 0.000903796 0.071263139 0.046805523 -7 4 -1.5 0.5 dme-miR-14-3p 7mer-m8 AAGACTG 3L 8570998 8571004 + 3L_8570998_8571004_+ 0.647584003 0.568545205 0.608064604 0.055888871 rhea FBtr0333109 8564005 8574409 3L + 8570981 8571069 3'utr rhea FlyBase G28858.1 ATGTGTCCTCACTACTAAAGACTGTGAAGGCTGTCGAGGATGAGCACACTCGCGGAACTCGTGCAATGGAGGCCACCGTAGAAGCCATC 31 8571005 0.988873903 4 29 166 0.944444444 1.230448921 0.472222222 0.161290323 0.277777778 31 1 1 34 3L:8570981-8571069 7 rhea FBtr0333109 8564005 8574409 AAGACTG 7mer-m8 dme-miR-14-3p 3L + 8570983 8571046 3'utr rhea FlyBase G21854.1 GTGTCCTCACTACTAAAGACTGTGAAGGCTGTCGAGGATGAGCACACTCGCGGAACTCGTGCAA 11 8571005 0.971328084 5 9 55 0.952380952 1.301029996 0.476190476 0.636363636 0.80952381 11 1 0 20 3L:8570983-8571046 7 17.5 588 FBgn0260442 4425.776667 56.13 85.46 0.003954108 0.311776234 0.204774163 -7 -7 -7 0.5 dme-miR-317-3p 7mer-m8 TGTGTTC 3L 8574024 8574030 + 3L_8574024_8574030_+ 0.604145859 0.455998246 0.530072053 0.104756243 rhea FBtr0333109|FBtr0333108|FBtr0333106|FBtr0333107|FBtr0333105|FBtr0305210 8564005|8573788|8573788|8573788|8573788|8573788 8574409|8574409|8574409|8574409|8574409|8574409 3L + 8573997 8574046 3'utr rhea FlyBase G28873.1 AATCAAGTTTCAATGTTTTCGTATATCTGTGTTCTACGTGTTTATTTGCC 11 8574022 0.992622032 5 9 121 0.916666667 1.041392685 0.083333333 0.090909091 0.166666667 11 1 0 11 3L:8573997-8574046 7 rhea FBtr0333105|FBtr0305210|FBtr0333109|FBtr0333108|FBtr0333106|FBtr0333107 8573788|8573788|8564005|8573788|8573788|8573788 8574409|8574409|8574409|8574409|8574409|8574409 TGTGTTC 7mer-m8 dme-miR-317-3p 3L + 8574008 8574070 3'utr rhea FlyBase G21864.1 AATGTTTTCGTATATCTGTGTTCTACGTGTTTATTTGCCATTAAATTGCCCATATATATTTAT 13 8574022 0.991195885 7 13 138 1 1.322219295 0.19047619 0.384615385 0.619047619 13 0 0 21 3L:8574008-8574070 7 8.5 589 FBgn0260442 4425.776667 56.13 85.46 0.001920567 0.151434171 0.099461736 2 2 2 0.5 dme-miR-14-3p 8mer-A1 AAGACTGA 3L 8678483 8678490 + 3L_8678483_8678490_+ 0.615415896 0.616432716 0.615924306 0.000718986 h FBtr0100153|FBtr0076569 8678422|8678422 8679253|8679253 3L + 8678265 8678585 stop_codon h FlyBase G28893.1 AGCTGTAGCTACGCCCCGCCCAGTCCGGCCAACTCTAGCTACGAGCCCATGGACATCAAGCCATCGGTCATCCAGCGCGTGCCAATGGAGCAGCAGCCCCTGTCGCTGGTGATCAAGAAGCAGATCAAGGAGGAGGAGCAGCCCTGGCGGCCCTGGTAGAGGGTGTCTGCATATGCATATCATATAGCATAGCCACCCCTATCGAATCTCCCGCTTTTAAGACTGACCCCCCACAACTCATCCAACTCGCACACATGCGCAGGCGTTGTGCGCATGCGCGTAGACATTTCACATCATTCGCCGGGATTGCGCAAATGTTGC 1311 8678481 0.94834906 48 1139 6193 0.867421719 1.596097044 0.113257828 0.118230359 0.229846769 1311 167 32 1302 3L:8678265-8678585 8 h FBtr0076569|FBtr0100153 8678422|8678422 8679253|8679253 AAGACTGA 8mer-A1 dme-miR-14-3p 3L + 8678259 8678596 stop_codon h FlyBase G21885.1 AGCAGCAGCTGTAGCTACGCCCCGCCCAGTCCGGCCAACTCTAGCTACGAGCCCATGGACATCAAGCCATCGGTCATCCAGCGCGTGCCAATGGAGCAGCAGCCCCTGTCGCTGGTGATCAAGAAGCAGATCAAGGAGGAGGAGCAGCCCTGGCGGCCCTGGTAGAGGGTGTCTGCATATGCATATCATATAGCATAGCCACCCCTATCGAATCTCCCGCTTTTAAGACTGACCCCCCACAACTCATCCAACTCGCACACATGCGCAGGCGTTGTGCGCATGCGCGTAGACATTTCACATCATTCGCCGGGATTGCGCAAATGTTGCTTTGAAGTGTT 885 8678481 0.928873114 47 731 4117 0.827932099 1.729569726 0.143518519 0.340112994 0.549382716 885 204 19 1073 3L:8678259-8678596 8 715 590 FBgn0001168 3068.926667 171.7433333 259.7866667 0.232980477 4.163189255 2.752258263 2 2 2 0.5 dme-bantam-3p 6mer3-8 TGATCT 3L 8725790 8725795 + 3L_8725790_8725795_+ 0.637555476 0.670446859 0.654001167 0.023257732 CG6511 FBtr0333887|FBtr0076570 8725510|8725510 8726108|8726108 3L + 8725764 8725865 3'utr CG6511 FlyBase G28919.1 TTTGTAAGCGTTTGGAGACAGTTTTCTGATCTTGTCATCGGCAGCTCGGCTCTTATAAAGTCTGAGGGCCCTGGCCCAAACGTGTCGTTTATCTAGATTAGC 30 8725790 0.808227039 13 28 236 0.921052632 1.544068044 0.131578947 0.233333333 0.394736842 30 3 0 35 3L:8725764-8725865 6 CG6511 FBtr0333887|FBtr0076570 8725510|8725510 8726108|8726108 TGATCT 6mer3-8 dme-bantam-3p 3L + 8725770 8725841 3'utr CG6511 FlyBase G21903.1 AGCGTTTGGAGACAGTTTTCTGATCTTGTCATCGGCAGCTCGGCTCTTATAAAGTCTGAGGGCCCTGGCCCA 23 8725790 0.675211494 8 16 169 0.717948718 1.447158031 0.205128205 0.652173913 0.794871795 23 11 0 28 3L:8725770-8725841 6 15 591 FBgn0035923 413.53 11.23333333 17.25666667 0.036273064 1.335311573 0.869229283 0 0 0 0.5 dme-miR-986-5p 7mer-m8 ATTCGAG 3L 892325 892331 + 3L_892325_892331_+ 0.649494163 0.528643616 0.589068889 0.085454279 CG32479 FBtr0333267|FBtr0333266|FBtr0072589 892174|892174|892174 895313|893520|893520 3L + 892275 892357 3'utr CG32479 FlyBase G26957.1 GCGAGTTTGGTTTTATATGCATATACATATACAAATTAACAATTAGATATATTCGAGCGGTATATAGTTAAGCCCAAAGTCCA 15 892323 0.72800944 11 13 104 0.894736842 0.929418926 0.105263158 0.133333333 0.315789474 15 1 1 17 3L:892275-892357 7 CG32479 FBtr0072589|FBtr0333266|FBtr0333267 892174|892174|892174 893520|893520|895313 ATTCGAG 7mer-m8 dme-miR-986-5p 3L + 892267 892343 3'utr CG32479 FlyBase G20405.1 GCGAGAATGCGAGTTTGGTTTTATATGCATATACATATACAAATTAACAATTAGATATATTCGAGCGGTATATAGTT 9 892310 0.987675896 6 7 73 0.857142857 1.079181246 0.142857143 0.333333333 0.571428571 9 2 0 12 3L:892267-892343 7 6 592 FBgn0052479 4815.663333 78.18666667 119.8133333 0.001245934 0.076739427 0.050077899 2 15 8.5 0.5 dme-miR-263a-5p 6mer3-8 GTGCCA 3L 893491 893496 + 3L_893491_893496_+ 0.991859297 0.804319631 0.898089464 0.132610594 CG32479 FBtr0333267|FBtr0333266|FBtr0072589 892174|892174|892174 895313|893520|893520 3L + 893469 893526 3'utr-intron CG32479 FlyBase G26964.1 ATATATATTATTTATAGATATCGTGCCAATGTTAAAACATCTAAAAATTTTCAAAAAA 12 893499 0.708699866 8 12 106 1 1.079181246 0.166666667 0 0 12 0 0 12 3L:893469-893526 6 CG32479 FBtr0072589|FBtr0333266|FBtr0333267 892174|892174|892174 893520|893520|895313 GTGCCA 6mer3-8 dme-miR-263a-5p 3L + 893473 893518 3'utr CG32479 FlyBase G20413.1 ATATTATTTATAGATATCGTGCCAATGTTAAAACATCTAAAAATTT 11 893492 0.771565008 4 10 87 0.9375 1.176091259 0 0.363636364 0.5625 11 1 0 15 3L:893473-893518 6 10.5 593 FBgn0052479 4815.663333 78.18666667 119.8133333 0.002180385 0.134293997 0.087636323 -8 -1 -4.5 0.5 dme-miR-79-3p 7mer-A1 AGCTTTA 3L 8939394 8939400 - 3L_8939394_8939400_- 0.541143357 0.626055314 0.583599335 0.06004178 orb2 FBtr0331515|FBtr0331514 8937098|8939063 8942890|8942890 3L - 8939376 8939411 3'utr orb2 FlyBase G35506.1 GTCGGATTGACAGCTTTAGTTTTATAGAGAATCTTG 12 8939395 0.870360101 5 12 109 1 1.204119983 0.25 0.25 0.4375 12 0 0 16 3L:8939376-8939411 7 orb2 FBtr0331515|FBtr0331514 8937098|8939063 8942890|8942890 AGCTTTA 7mer-A1 dme-miR-79-3p 3L - 8939380 8939410 3'utr orb2 FlyBase G26863.1 TCGGATTGACAGCTTTAGTTTTATAGAGAAT 5 8939396 0.78121999 2 4 47 0.769230769 1 0.230769231 0.8 0.923076923 5 3 0 10 3L:8939380-8939410 7 8.5 594 FBgn0264307 292.6133333 6.573333333 10.15 0.029048574 1.293103448 0.837438424 -5 -4 -4.5 0.5 dme-miR-8-3p 8mer-A1 CAGTATTA 3L 8941261 8941268 - 3L_8941261_8941268_- 0.575888546 0.535738927 0.555813736 0.028390054 orb2 FBtr0331515|FBtr0331514 8937098|8939063 8942890|8942890 3L - 8941247 8941294 3'utr orb2 FlyBase G35508.1 AACAAAACAGTCAAATTGCTTGTGTTCAGTATTATGATTTATTTATGA 48 8941273 0.617789618 7 48 460 1 1.77815125 0.233333333 0.1875 0.35 48 0 0 60 3L:8941247-8941294 8 orb2 FBtr0331515|FBtr0331514 8937098|8939063 8942890|8942890 CAGTATTA 8mer-A1 dme-miR-8-3p 3L - 8941249 8941290 3'utr orb2 FlyBase G26865.1 AAACAGTCAAATTGCTTGTGTTCAGTATTATGATTTATTTAT 40 8941274 0.659603857 5 38 390 0.962962963 1.716003344 0.203703704 0.275 0.462962963 40 2 0 52 3L:8941249-8941290 8 44 595 FBgn0264307 292.6133333 6.573333333 10.15 0.150369088 6.693711968 4.334975369 5 6 5.5 0.5 dme-miR-277-3p 7mer-m8 TGCATTT 3L 8941368 8941374 - 3L_8941368_8941374_- 0.365862103 0.584003417 0.47493276 0.154249192 orb2 FBtr0331515|FBtr0331513|FBtr0331514 8937098|8941311|8939063 8942890|8942890|8942890 3L - 8941350 8941402 3'utr orb2 FlyBase G35509.1 AACAACACATTTACACTGAAAGTCTGTTTGCATTTGTTGCCATTTGGCTTAAT 14 8941375 0.870932845 5 13 118 0.941176471 1.204119983 0.176470588 0.214285714 0.352941176 14 1 0 16 3L:8941350-8941402 7 orb2 FBtr0331515|FBtr0331513|FBtr0331514 8937098|8941311|8939063 8942890|8942890|8942890 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 8941350 8941402 3'utr orb2 FlyBase G26866.1 AACAACACATTTACACTGAAAGTCTGTTTGCATTTGTTGCCATTTGGCTTAAT 11 8941375 0.858351224 5 11 102 1 1.176091259 0.066666667 0.272727273 0.466666667 11 0 0 15 3L:8941350-8941402 7 9.5 596 FBgn0264307 292.6133333 6.573333333 10.15 0.032466053 1.445233266 0.935960591 1 1 1 0.5 dme-miR-1008-3p 6mer2-7 GCTGTG 3L 894753 894758 + 3L_894753_894758_+ 0.757811844 0.535276714 0.646544279 0.157356078 CG32479 FBtr0333267 892174 895313 3L + 894685 894776 3'utr CG32479 FlyBase G26971.1 TTGTAATACCCAAGTCACATTCTGTTGTCCCCGATTAATGTATGTTTTAGTTTTAAGTAGTTTCTAAGGCTGTGTAACTAACTAACATAAGT 49 894746 0.98993941 14 45 542 0.927272727 1.707570176 0.036363636 0.102040816 0.2 49 4 0 51 3L:894685-894776 6 CG32479 FBtr0333267 892174 895313 GCTGTG 6mer2-7 dme-miR-1008-3p 3L + 894689 894776 3'utr CG32479 FlyBase G20419.1 AATACCCAAGTCACATTCTGTTGTCCCCGATTAATGTATGTTTTAGTTTTAAGTAGTTTCTAAGGCTGTGTAACTAACTAACATAAGT 42 894747 0.993944659 14 35 451 0.852459016 1.414973348 0.081967213 0.357142857 0.557377049 42 8 1 52 3L:894689-894776 6 40.5 597 FBgn0052479 4815.663333 78.18666667 119.8133333 0.008410056 0.517991132 0.338025818 7 6 6.5 0.5 dme-miR-14-3p 7mer-m8 AAGACTG 3L 8961313 8961319 - 3L_8961313_8961319_- 0.595304233 0.591299636 0.593301934 0.00283168 CG5660 FBtr0346542|FBtr0076560 8961272|8961272 8961399|8961399 3L - 8961298 8961336 3'utr CG5660 FlyBase G35523.1 CTGTTTGTTTAGAATTAAAGACTGCAATATTTATTAAAT 14 8961322 0.755189438 5 14 114 1 1.176091259 0.133333333 0.071428571 0.133333333 14 0 0 15 3L:8961298-8961336 7 CG5660 FBtr0346542|FBtr0076560 8961272|8961272 8961399|8961399 AAGACTG 7mer-m8 dme-miR-14-3p 3L - 8961298 8961330 3'utr CG5660 FlyBase G26875.1 GTTTAGAATTAAAGACTGCAATATTTATTAAAT 8 8961322 0.73731544 5 8 54 1 1.041392685 0.272727273 0.375 0.545454545 8 0 0 11 3L:8961298-8961330 7 11 598 FBgn0035942 106.3333333 4.03 6.186666667 0.103448276 2.729528536 1.778017241 3 3 3 0.5 dme-miR-8-3p 7mer-A1 AGTATTA 3L 8971682 8971688 + 3L_8971682_8971688_+ 0.563218985 0.80338629 0.683302637 0.169823926 CG5026 FBtr0076516 8971179 8971752 3L + 8971584 8971694 3'utr CG5026 FlyBase G28965.1 TTTTATGGAATTTTTAGCGTATAAGTCTCCAAAATTACCTATTTATAGTACTTACTTGTGTCAGTTATTTAGTGGTCAACAAGCCACAGATCAAATTAAGTATTATAAACT 9 8971680 0.984019702 6 9 78 1 0.954242509 0 0 0 9 0 0 9 3L:8971584-8971694 7 CG5026 FBtr0076516 8971179 8971752 AGTATTA 7mer-A1 dme-miR-8-3p 3L + 8971661 8971697 3'utr CG5026 FlyBase G21935.1 AACAAGCCACAGATCAAATTAAGTATTATAAACTCAA 5 8971680 0.976598387 3 5 34 1 0.698970004 0 0 0 5 0 0 5 3L:8971661-8971697 7 4.5 599 FBgn0035945 330 15.41 23.52 0.013636364 0.29201817 0.191326531 2 2 2 0.5 dme-miR-1008-3p 8mer-A1 AGCTGTGA 3L 9067849 9067856 - 3L_9067849_9067856_- 0.261028213 0.277546119 0.269287166 0.011679919 CG4911 FBtr0345351 9067193 9070515 3L - 9067834 9067884 3'utr CG4911 FlyBase G35572.1 TAAAAGTTATAAGAGCAAAAGTGAAGAAAGCTGTGATACAACAAGATCCAA 13 9067863 0.920346242 5 11 38 0.941176471 1.204119983 0.117647059 0.230769231 0.411764706 13 1 0 16 3L:9067834-9067884 8 CG4911 FBtr0345351 9067193 9070515 AGCTGTGA 8mer-A1 dme-miR-1008-3p 3L - 9067843 9067899 3'utr CG4911 FlyBase G26917.1 TATGCAAGTTATGCTTAAAAGTTATAAGAGCAAAAGTGAAGAAAGCTGTGATACAAC 10 9067853 0.957703963 4 8 39 0.733333333 0.740362689 0.066666667 0.4 0.6 10 3 1 11 3L:9067843-9067899 8 8 600 FBgn0035959 1732.163333 43.72333333 67.07666667 0.004618502 0.182968667 0.119266511 7 -3 2 0.5 dme-bantam-3p 7mer-A1 GATCTCA 3L 9069143 9069149 - 3L_9069143_9069149_- 0.468362066 0.448879328 0.458620697 0.01377642 CG4911 FBtr0345351 9067193 9070515 3L - 9069108 9069178 3'utr CG4911 FlyBase G35581.1 GGGACAAGTAACAACCGCAAACAAAATGCGATCTCACAGATAACTCCTACAACTATCCAATCGACCATCTA 75 9069152 0.969327952 5 70 230 0.927710843 1.40936947 0.048192771 0.093333333 0.180722892 75 4 2 77 3L:9069108-9069178 7 CG4911 FBtr0345351 9067193 9070515 GATCTCA 7mer-A1 dme-bantam-3p 3L - 9069120 9069187 3'utr CG4911 FlyBase G26922.1 TTGGTTTCTGGGACAAGTAACAACCGCAAACAAAATGCGATCTCACAGATAACTCCTACAACTATCCA 51 9069152 0.951964142 5 44 173 0.817073171 1.826074803 0.048780488 0.450980392 0.658536585 51 15 0 67 3L:9069120-9069187 7 59.5 601 FBgn0035959 1732.163333 43.72333333 67.07666667 0.034350109 1.360829458 0.887044675 3 3 3 0.5 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 3L 9069343 9069350 - 3L_9069343_9069350_- 0.587813848 0.58469252 0.586253184 0.002207092 CG4911 FBtr0345351 9067193 9070515 3L - 9069327 9069372 3'utr CG4911 FlyBase G35583.1 AACAGCAACAACAACAAAAATGGTACCTGAAGATCATGCCGAGCAT 23 9069352 0.935337378 2 19 70 0.833333333 1.301029996 0.041666667 0.043478261 0.083333333 23 4 0 20 3L:9069327-9069372 8 CG4911 FBtr0345351 9067193 9070515 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3L - 9069318 9069370 3'utr CG4911 FlyBase G26924.1 CAGCAACAACAACAAAAATGGTACCTGAAGATCATGCCGAGCATTTAGAGAAC 17 9069352 0.927031509 3 14 47 0.833333333 1.301029996 0 0.411764706 0.583333333 17 4 0 20 3L:9069318-9069370 8 19 602 FBgn0035959 1732.163333 43.72333333 67.07666667 0.010968942 0.434550583 0.283257964 2 2 2 0.5 dme-miR-305-5p 8mer-A1 AGTACAAA 3L 9070214 9070221 - 3L_9070214_9070221_- 0.530760212 0.528208828 0.52948452 0.001804112 CG4911 FBtr0345351|FBtr0331549|FBtr0076542 9067193|9069647|9069647 9070515|9070515|9070515 3L - 9070152 9070253 3'utr CG4911 FlyBase G35591.1 GTAATCAAAATCGCGATTAGCCCTTGTTTATTAGTACAAAAGCGACAGATCAAGAGCGACAGGAATGTTAGGAGCAAAGCAAAAGACTTGAGCACTTCACAA 46 9070222 0.859118576 9 39 275 0.862745098 1.342422681 0.235294118 0.108695652 0.196078431 46 6 1 44 3L:9070152-9070253 8 CG4911 FBtr0076542|FBtr0345351|FBtr0331549 9069647|9067193|9069647 9070515|9070515|9070515 AGTACAAA 8mer-A1 dme-miR-305-5p 3L - 9070153 9070283 3'utr CG4911 FlyBase G26929.1 ATGTTAAATTTTCCTAATTTCTTAGCCTTTGTAATCAAAATCGCGATTAGCCCTTGTTTATTAGTACAAAAGCGACAGATCAAGAGCGACAGGAATGTTAGGAGCAAAGCAAAAGACTTGAGCACTTCACA 26 9070222 0.980559667 11 21 160 0.761904762 1.505149978 0.261904762 0.423076923 0.642857143 26 10 0 32 3L:9070153-9070283 8 24.5 603 FBgn0035959 1732.163333 43.72333333 67.07666667 0.014144163 0.560341542 0.36525369 1 1 1 0.5 dme-miR-276a-3p 6mer3-8 AGTTCC 3L 9097232 9097237 + 3L_9097232_9097237_+ 0.70629821 0.687033219 0.696665714 0.013622412 CG13315 FBtr0076530|FBtr0340709 9097219|9097219 9097494|9097374 3L + 9097225 9097275 3'utr CG13315 FlyBase G29046.1 TAGTTTTAGTTCCGGCCTTGACATGTTCCTAATGTCGCACTAGACATACAT 77 9097234 0.73005564 8 76 572 0.989361702 1.968482949 0.138297872 0.194805195 0.340425532 77 1 0 93 3L:9097225-9097275 6 CG13315 FBtr0340709|FBtr0076530 9097219|9097219 9097374|9097494 AGTTCC 6mer3-8 dme-miR-276a-3p 3L + 9097225 9097273 3'utr CG13315 FlyBase G21984.1 TAGTTTTAGTTCCGGCCTTGACATGTTCCTAATGTCGCACTAGACATAC 47 9097234 0.716352278 9 44 369 0.918918919 1.832508913 0.22972973 0.361702128 0.594594595 47 6 0 68 3L:9097225-9097273 6 54.5 604 FBgn0040827 102.6933333 24.86 37.96 0.53070631 2.19227675 1.435721812 -2 -2 -2 0.5 dme-miR-283-5p 8mer-A1 TGATATTA 3L 9348311 9348318 + 3L_9348311_9348318_+ 0.574049861 0.576498127 0.575273994 0.001731139 PGRP-LC FBtr0308349|FBtr0089492|FBtr0346814|FBtr0089491 9348174|9347217|9348174|9348174 9348336|9348336|9348336|9348336 3L + 9348291 9348330 3'utr PGRP-LC FlyBase G29076.1 ATTCGTTTAAAAAGAAAATGTGATATTAAATAAAACAAAA 80 9348316 0.667474309 7 73 446 0.914893617 1.33243846 0 0.1375 0.265957447 80 5 3 86 3L:9348291-9348330 8 PGRP-LC FBtr0089491|FBtr0346814|FBtr0089492|FBtr0308349 9348174|9348174|9347217|9348174 9348336|9348336|9348336|9348336 TGATATTA 8mer-A1 dme-miR-283-5p 3L + 9348291 9348332 3'utr PGRP-LC FlyBase G22004.1 ATTCGTTTAAAAAGAAAATGTGATATTAAATAAAACAAAATG 58 9348316 0.658098571 6 53 335 0.91954023 1.425968732 0.011494253 0.362068966 0.574712644 58 5 2 80 3L:9348291-9348332 8 68.5 605 FBgn0035976 208.34 13.13 20.06 0.328789479 5.217060168 3.414755733 -5 -5 -5 0.5 dme-bantam-3p 7mer-A1 GATCTCA 3L 9369143 9369149 + 3L_9369143_9369149_+ 0.578612358 0.636838165 0.607725261 0.041171858 CG4452 FBtr0333883 9369104 9370300 3L + 9369093 9369171 stop_codon CG4452 FlyBase G29090.1 AATAGCGGCGTGAATGCCGTAAGCGGAGCTGGATTGGATCTACCTGATAAGATCTCACGCGGAAATGGTGGTAATGGGA 19 9369139 0.974562639 6 16 96 0.826086957 0.977723605 0.52173913 0.210526316 0.347826087 19 3 1 19 3L:9369093-9369171 7 CG4452 FBtr0333883 9369104 9370300 GATCTCA 7mer-A1 dme-bantam-3p 3L + 9369116 9369178 3'utr CG4452 FlyBase G22019.1 CGGAGCTGGATTGGATCTACCTGATAAGATCTCACGCGGAAATGGTGGTAATGGGACCATTGC 15 9369139 0.925827438 9 14 78 0.958333333 1.361727836 0.25 0.4 0.625 15 1 0 23 3L:9369116-9369178 7 13 606 FBgn0035981 206.7633333 15.1 22.93333333 0.062873817 0.860927152 0.566860465 4 4 4 0.5 dme-miR-8-3p 6mer2-7 AGTATT 3L 9424401 9424406 + 3L_9424401_9424406_+ 0.560602449 0.769601551 0.665102 0.147784752 aay FBtr0076457 9424361 9424781 3L + 9424371 9424438 3'utr aay FlyBase G29129.1 TACGTAAGGCGGTGGGGGAGTGGCGAATTTAGTATTTGAAATCAACGTGTTATAGCTCGTAGTGATGC 14 9424407 0.973040404 7 12 101 0.9375 0.875061263 0.25 0.142857143 0.25 14 0 1 15 3L:9424371-9424438 6 aay FBtr0076457 9424361 9424781 AGTATT 6mer2-7 dme-miR-8-3p 3L + 9424370 9424454 3'utr aay FlyBase G22041.1 ATACGTAAGGCGGTGGGGGAGTGGCGAATTTAGTATTTGAAATCAACGTGTTATAGCTCGTAGTGATGCACATGTTTATGCCCAA 16 9424409 0.979943091 7 14 102 0.869565217 1.301029996 0.52173913 0.375 0.565217391 16 3 0 20 3L:9424370-9424454 6 7.5 607 FBgn0023129 178.6666667 14.14 21.50666667 0.041977612 0.530410184 0.348729076 -6 -8 -7 0.5 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3L 9486489 9486495 - 3L_9486489_9486495_- 0.786354794 0.789923569 0.788139181 0.002523523 pall FBtr0076471|FBtr0076471 9486446|9486446 9486622|9486622 3L - 9486448 9486554 3'utr pall FlyBase G35731.1 AGCATTAATTAGGCAGTGCATCTTCGATATATCGCGTTAAGATTTATTGTTGCACTTGTTACTTAAATATTGTATTACTACTATATAAATACATTGAACATCTAGTG 12 9486498 0.99437503 7 11 120 0.916666667 0.740362689 0.083333333 0 0 12 0 1 11 3L:9486448-9486554 7 pall FBtr0076471|FBtr0076471 9486446|9486446 9486622|9486622 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3L - 9486465 9486509 3'utr pall FlyBase G27015.1 ATTGTTGCACTTGTTACTTAAATATTGTATTACTACTATATAAAT 8 9486485 0.787775698 5 8 95 1 1.041392685 0 0.375 0.545454545 8 0 0 11 3L:9486465-9486509 7 7.5 608 FBgn0036005 105.5133333 10.81333333 16.61 0.071081064 0.693588163 0.45153522 3 -10 -3.5 0.5 dme-miR-282-5p 7mer-m8 AGAGGCT 3L 9495298 9495304 - 3L_9495298_9495304_- 0.506346359 0.553058369 0.529702364 0.033030372 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 3L - 9495235 9495509 3'utr path FlyBase G35742.1 CTACCGAGCACCATTATGCCGTTTTAGCACGTTTTAGTACACTCGCGATTATATAATGTAGAGAGTAAGCTAGTTGATAGCCGTTCAGAAACACTTTTAGAACAGTTCTGAACGATTCAAGCGGCATTCAAACTGGAACTTTACTAAGTGCACTTTAATAGTTTCCTATTGATTTCCTATTAATACCATTTAGTATGGATCTGTAAGAGGCTTAGTTACGTACCATCCTCCAAAAATCCCCACCCTTTCCTCTCTGTTCTAAAATAGTATTACTC 153 9495297 0.925718003 52 145 1226 0.95212766 1.775731776 0.14893617 0.189542484 0.340425532 153 7 2 179 3L:9495235-9495509 7 path FBtr0076427|FBtr0333865|FBtr0333864 9494553|9494553|9494553 9495677|9495677|9495677 AGAGGCT 7mer-m8 dme-miR-282-5p 3L - 9495290 9495353 3'utr path FlyBase G27024.2 AATAGTTTCCTATTGATTTCCTATTAATACCATTTAGTATGGATCTGTAAGAGGCTTAGTTACG 47 9495297 0.679395505 14 45 391 0.96875 1.792391689 0.078125 0.319148936 0.5 47 2 0 62 3L:9495290-9495353 7 42 609 FBgn0036007 512.66 22.65333333 35.05666667 0.081925643 1.854031783 1.198060283 -7 -7 -7 0.5 dme-miR-34-5p 7mer-A1 ACTGCCA 3L 9507401 9507407 - 3L_9507401_9507407_- 0.621964988 0.629406059 0.625685524 0.005261652 CG3408 FBtr0076426|FBtr0333863 9506816|9506816 9507578|9507578 3L - 9507354 9507484 3'utr CG3408 FlyBase G35760.1 AATTCAAAATGAGATACGTGTTGACCACCTGAACGAGTTATACGACTGCTACTTTGATATACCATTATCTGTAATTTACTGCCATTTATTTTGATAGACACTAAGCCCACTACGTCCATTGAAGGGAGATT 98 9507435 0.804423284 23 93 690 0.947826087 2.037426498 0.295652174 0.153061224 0.27826087 98 6 0 109 3L:9507354-9507484 7 CG3408 FBtr0076426|FBtr0333863 9506816|9506816 9507578|9507578 ACTGCCA 7mer-A1 dme-miR-34-5p 3L - 9507354 9507484 3'utr CG3408 FlyBase G27043.1 AATTCAAAATGAGATACGTGTTGACCACCTGAACGAGTTATACGACTGCTACTTTGATATACCATTATCTGTAATTTACTGCCATTTATTTTGATAGACACTAAGCCCACTACGTCCATTGAAGGGAGATT 90 9507436 0.987277269 25 82 724 0.920863309 1.26211193 0.258992806 0.4 0.611510791 90 5 6 128 3L:9507354-9507484 7 26.5 610 FBgn0036008 265.6766667 17.37666667 26.79 0.099745304 1.52503357 0.989175065 28 29 28.5 0.5 dme-miR-14-3p 7mer-A1 AGACTGA 3L 9596485 9596491 + 3L_9596485_9596491_+ 0.654044581 0.658550602 0.656297592 0.003186223 CG42673 FBtr0302711 9595238 9596713 3L + 9596463 9596513 3'utr CG42673 FlyBase G29216.1 AATTTATGCAAAACGATTTTTGAGACTGAAACTGAAATTTGTACTAAGCAT 59 9596483 0.771565812 4 59 355 1 1.819543936 0.348484848 0.101694915 0.196969697 59 0 0 66 3L:9596463-9596513 7 CG42673 FBtr0302711 9595238 9596713 AGACTGA 7mer-A1 dme-miR-14-3p 3L + 9596463 9596500 3'utr CG42673 FlyBase G22103.1 AATTTATGCAAAACGATTTTTGAGACTGAAACTGAAAT 69 9596483 0.712520464 4 68 417 0.989010989 1.954242509 0.395604396 0.289855072 0.461538462 69 1 0 90 3L:9596463-9596500 7 63.5 611 FBgn0261555 60.33333333 2.016666667 3.083333333 1.052486188 31.48760331 20.59459459 2 2 2 0.5 dme-miR-277-3p 7mer-m8 TGCATTT 3L 9839216 9839222 - 3L_9839216_9839222_- 0.554109254 0.396334327 0.47522179 0.111563772 RasGAP1 FBtr0076368 9839091 9840561 3L - 9839201 9839265 3'utr RasGAP1 FlyBase G35848.1 TGTTTGGAGTTTCCAACGTGGTTCATATACATATAATTTCACTTGCATTTTAAGGACACAATTAT 8 9839224 0.986844698 6 8 69 1 1 0.2 0.25 0.4 8 0 0 10 3L:9839201-9839265 7 RasGAP1 FBtr0076368 9839091 9840561 TGCATTT 7mer-m8 dme-miR-277-3p 3L - 9839203 9839230 3'utr RasGAP1 FlyBase G27117.1 ATTTCACTTGCATTTTAAGGACACAATT 5 9839216 0.97312014 4 5 37 1 0.698970004 0 0 0 5 0 0 5 3L:9839203-9839230 7 4.5 612 FBgn0004390 1606.046667 35.75666667 55.00333333 0.002801911 0.125850657 0.081813223 2 -6 -2 0.5 dme-miR-282-5p 7mer-m8 AGAGGCT 3L 9893175 9893181 + 3L_9893175_9893181_+ 0.629023131 0.619133142 0.624078137 0.006993286 CalpB FBtr0076343 9892344 9893319 3L + 9893160 9893188 3'utr CalpB FlyBase G29363.1 TAACCAATCGGGTTTAGAGGCTCTTTTTG 5 9893174 0.641428468 3 4 43 0.888888889 0.903089987 0.222222222 0.6 0.777777778 5 1 0 8 3L:9893160-9893188 7 CalpB FBtr0076343 9892344 9893319 AGAGGCT 7mer-m8 dme-miR-282-5p 3L + 9893154 9893188 3'utr CalpB FlyBase G22213.1 TGAAATTAACCAATCGGGTTTAGAGGCTCTTTTTG 8 9893174 0.980765952 4 8 64 1 1 0.6 0.125 0.3 8 0 0 10 3L:9893154-9893188 7 6 613 FBgn0025866 591.89 16.56333333 25.20333333 0.010137019 0.362245925 0.238063748 1 1 1 0.5 dme-miR-283-5p 8mer-A1 TGATATTA 3L 9895667 9895674 - 3L_9895667_9895674_- 0.575771093 0.548531444 0.562151268 0.019261377 CG6707 FBtr0076356|FBtr0076358|FBtr0076357 9894805|9894805|9894805 9895759|9895759|9895759 3L - 9895656 9895736 3'utr CG6707 FlyBase G35913.1 AAGGAAGAAAGTGCATTGTTTTATTTTTATATATATATATTATTCATATATATCATTCCTTTTGATATTAAATTTAAAACT 17 9895675 0.963762983 10 16 186 0.95 1.278753601 0.1 0.176470588 0.3 17 1 0 19 3L:9895656-9895736 8 CG6707 FBtr0076357|FBtr0076356|FBtr0076358 9894805|9894805|9894805 9895759|9895759|9895759 TGATATTA 8mer-A1 dme-miR-283-5p 3L - 9895658 9895691 3'utr CG6707 FlyBase G27171.1 ATATATATCATTCCTTTTGATATTAAATTTAAAA 5 9895676 0.918878124 3 5 56 1 0.84509804 0 0.4 0.571428571 5 0 0 7 3L:9895658-9895691 8 7.5 614 FBgn0036058 1005.72 59.74 91.51 0.007457344 0.125544024 0.081958256 1 2 1.5 0.5 dme-miR-283-5p 7mer-A1 GATATTA 3L 9902465 9902471 + 3L_9902465_9902471_+ 0.753280836 0.547888831 0.650584833 0.145234076 nudE FBtr0345694|FBtr0076344|FBtr0113158|FBtr0345695 9902278|9902337|9902278|9902278 9902965|9902965|9902965|9903031 3L + 9902430 9902531 3'utr nudE FlyBase G29378.1 ATTTGAACTAAAATGACTTTGTATAAACCACTTGCGATATTATGAATTACACAACAGTTGATGTTGTTGTTTCGAGCCCAACATATATAACATGCCTTAGTA 108 9902461 0.98142893 16 106 772 0.985185185 1.822821645 0.081481481 0.231481481 0.385185185 108 1 1 133 3L:9902430-9902531 7 nudE FBtr0345694|FBtr0076344|FBtr0113158|FBtr0345695 9902278|9902337|9902278|9902278 9902965|9902965|9902965|9903031 GATATTA 7mer-A1 dme-miR-283-5p 3L + 9902400 9902481 3'utr nudE FlyBase G22228.1 ATTAATTAAGTTTCTGCTGCCTCTTTATTTATTTGAACTAAAATGACTTTGTATAAACCACTTGCGATATTATGAATTACAC 87 9902449 0.831453804 11 86 641 0.992125984 1.799340549 0.007874016 0.344827586 0.551181102 87 0 1 126 3L:9902400-9902481 7 46.5 615 FBgn0036059 1404.16 85.35333333 130.67 0.033115884 0.544794189 0.355858269 4 16 10 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3L 9970951 9970957 + 3L_9970951_9970957_+ 0.700477905 0.679300582 0.689889244 0.014974612 Dronc FBtr0076347|FBtr0076347|FBtr0076347 9970748|9970748|9970748 9971002|9971002|9971002 3L + 9970935 9970974 3'utr Dronc FlyBase G29394.1 GAAATTATGTAATTTATGTGATAACTGCCAGAAATCTACA 35 9970948 0.642870553 6 31 267 0.87804878 1.255272505 0.414634146 0.142857143 0.268292683 35 4 1 36 3L:9970935-9970974 7 Dronc FBtr0076347|FBtr0076347|FBtr0076347 9970748|9970748|9970748 9971002|9971002|9971002 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3L + 9970928 9970971 3'utr Dronc FlyBase G22243.1 AAGGTACGAAATTATGTAATTTATGTGATAACTGCCAGAAATCT 22 9970948 0.899930366 5 21 183 0.962962963 1.414973348 0.333333333 0.227272727 0.37037037 22 1 0 26 3L:9970928-9970971 7 28.5 616 FBgn0026404 332.5566667 20.05666667 30.72333333 0.08569968 1.420973907 0.92763372 3 3 3 0.5 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 10073728 10073733 + 3R_10073728_10073733_+ 0.562683538 0.890685144 0.726684341 0.231932156 nerfin-2 FBtr0082177 10073452 10073761 3R + 10073668 10073749 stop_codon nerfin-2 FlyBase G41691.1 AGTCCGGCGGAAATGTTATCATGTGACTTAACAACTATTAGCAGCATTGAATCAACGATCTCTAGTTAAAGTTTAATAAATC 73 10073731 0.91463315 12 70 522 0.965909091 1.929418926 0.056818182 0.150684932 0.295454545 73 3 0 85 3R:10073668-10073749 6 nerfin-2 FBtr0082177 10073452 10073761 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R + 10073662 10073744 stop_codon nerfin-2 FlyBase G31463.1 CTGCAGAGTCCGGCGGAAATGTTATCATGTGACTTAACAACTATTAGCAGCATTGAATCAACGATCTCTAGTTAAAGTTTAAT 49 10073730 0.981557683 12 47 346 0.970149254 1.511883361 0.044776119 0.265306122 0.462686567 49 1 1 65 3R:10073662-10073744 6 36 617 FBgn0041105 0.666666667 0.036666667 0.056666667 54 981.8181818 635.2941176 -3 -2 -2.5 0.5 dme-bantam-3p 7mer-m8 TGATCTC 3R 10360735 10360741 + 3R_10360735_10360741_+ 0.440028869 0.511813044 0.475920956 0.050759024 jumu FBtr0082237 10360257 10361612 3R + 10360707 10360817 3'utr jumu FlyBase G41776.2 GAGCTGGTTTGAGTTGCAACTTTTGATTTGATCTCCCTACTGACAAATAAATTTTCATCCTTCAATCGATAAGAAACTTGACAATGCATTTATGACAAACGATTCCACGCT 95 10360734 0.769639749 17 90 867 0.946902655 2.029383778 0.088495575 0.147368421 0.283185841 95 6 0 107 3R:10360707-10360817 7 jumu FBtr0082237 10360257 10361612 TGATCTC 7mer-m8 dme-bantam-3p 3R + 10360663 10360815 3'utr jumu FlyBase G31516.1 CCACTGACGACGCATGAAGCATGTTAATACTTTTTACCAGACTCGAGCTGGTTTGAGTTGCAACTTTTGATTTGATCTCCCTACTGACAAATAAATTTTCATCCTTCAATCGATAAGAAACTTGACAATGCATTTATGACAAACGATTCCACG 80 10360734 0.954561351 21 75 714 0.922330097 1.375663614 0.067961165 0.2625 0.427184466 80 5 3 95 3R:10360663-10360815 7 68 618 FBgn0015396 1426.553333 44.76666667 68.68333333 0.047667338 1.518987342 0.990050959 1 1 1 0.5 dme-miR-8-3p 7mer-m8 CAGTATT 3R 10361004 10361010 + 3R_10361004_10361010_+ 0.498625116 0.537548364 0.51808674 0.027522929 jumu FBtr0082237 10360257 10361612 3R + 10360968 10361027 3'utr jumu FlyBase G41778.1 AATTGAAAGAGAATTGATCACACATACTTGCCGGTCCAGTATTCGTAAGCGAGGTATATT 95 10360997 0.849758722 10 92 592 0.983471074 2.075546961 0.132231405 0.210526316 0.380165289 95 2 0 119 3R:10360968-10361027 7 jumu FBtr0082237 10360257 10361612 CAGTATT 7mer-m8 dme-miR-8-3p 3R + 10360967 10361038 3'utr jumu FlyBase G31517.1 AAATTGAAAGAGAATTGATCACACATACTTGCCGGTCCAGTATTCGTAAGCGAGGTATATTGAGGATTTTTA 73 10360997 0.853718753 11 72 437 0.962616822 2.012837225 0.112149533 0.301369863 0.523364486 73 4 0 103 3R:10360967-10361038 7 72.5 619 FBgn0015396 1426.553333 44.76666667 68.68333333 0.050821794 1.619508563 1.055569037 7 7 7 0.5 dme-miR-11-3p 7mer-m1 TGTGATG 3R 10361417 10361423 + 3R_10361417_10361423_+ 0.567134121 0.579708826 0.573421473 0.008891656 jumu FBtr0082237 10360257 10361612 3R + 10361396 10361509 3'utr jumu FlyBase G41780.1 TTTGTTATTACCCTTTTCTTTTGTGATGCTTCGACTTAGCTTGCGCATTTAACAATTCCATTTACGAACCAGGAACATTTATGCATTTTTTGTTGTAATATTAGCACCTAAATA 52 10361415 0.94948096 19 51 525 0.969230769 1.799340549 0.307692308 0.230769231 0.384615385 52 2 0 63 3R:10361396-10361509 7 jumu FBtr0082237 10360257 10361612 TGTGATG 7mer-m1 dme-miR-11-3p 3R + 10361370 10361556 3'utr jumu FlyBase G31520.1 AGGATGGCTGATGGAATTAAACCGTTTTTGTTATTACCCTTTTCTTTTGTGATGCTTCGACTTAGCTTGCGCATTTAACAATTCCATTTACGAACCAGGAACATTTATGCATTTTTTGTTGTAATATTAGCACCTAAATATTGTATTTAATCATTAAGTGAAGCTCTGTAAATCTTTAAGCTAAGAA 45 10361415 0.991478366 25 41 442 0.921875 1.469822016 0.375 0.311111111 0.515625 45 4 1 59 3R:10361370-10361556 7 22.5 620 FBgn0015396 1426.553333 44.76666667 68.68333333 0.015772281 0.502606106 0.327590391 2 2 2 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 10399396 10399401 + 3R_10399396_10399401_+ 0.937968697 0.994273833 0.966121265 0.039813718 cwo FBtr0082246|FBtr0082246|FBtr0082246|FBtr0305152|FBtr0305152|FBtr0305152|FBtr0305151|FBtr0305151|FBtr0305151 10399337|10399337|10399337|10399337|10399337|10399337|10399337|10399337|10399337 10400752|10400752|10400752|10400752|10400752|10400752|10400752|10400752|10400752 3R + 10399279 10399422 stop_codon cwo FlyBase G41802.1 GTGGCCGCCGCAGCGGTGGCTAAGGCCAAACTGGAGCAGGCCATGAACCAGAGCTGGTAAAGCAAAGCAATCGCAATGCAATGGGTCGACAGATGGAACAACACTACCTCAGTACTTCTGTGAATAATCATTAAATGATTAATC 78 10399395 0.9785535 14 73 483 0.944444444 1.929418926 0.344444444 0.08974359 0.211111111 78 5 0 85 3R:10399279-10399422 6 cwo FBtr0305151|FBtr0305151|FBtr0305151|FBtr0082246|FBtr0082246|FBtr0082246|FBtr0305152|FBtr0305152|FBtr0305152 10399337|10399337|10399337|10399337|10399337|10399337|10399337|10399337|10399337 10400752|10400752|10400752|10400752|10400752|10400752|10400752|10400752|10400752 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 10399307 10399411 stop_codon cwo FlyBase G31537.1 AACTGGAGCAGGCCATGAACCAGAGCTGGTAAAGCAAAGCAATCGCAATGCAATGGGTCGACAGATGGAACAACACTACCTCAGTACTTCTGTGAATAATCATTA 38 10399395 0.976328673 13 35 224 0.896551724 1.716003344 0.24137931 0.421052632 0.620689655 38 6 0 52 3R:10399307-10399411 6 33 621 FBgn0259938 1085.47 27.38 41.65666667 0.030401577 1.205259313 0.792190126 1 1 1 0.5 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA 3R 10766549 10766556 + 3R_10766549_10766556_+ 0.35422183 0.336967424 0.345594627 0.012200703 Cap-H2 FBtr0301310|FBtr0302571|FBtr0301311 10765896|10765896|10765896 10766756|10766756|10766756 3R + 10766449 10766688 stop_codon Cap-H2 FlyBase G41832.1 CTATACCTCCTTTGATTTAGAACAAAAATAGACAAATGACTTTTTGATTGACGAAGCGCGTGTTTTGGAAATCCTCATGAGCTGATAGTACTAAATTCAAGTACCTGATCTCGTCTGTACAAAAGTATAAACATAAGAACTCTTCGGACATAAGACAAAGTTCAAGATAAATTAAGGATAAAGTGTATATATACGTATGTATTTACCAGAGTGCAAGCTAGTGTCTATTTACAATCATTT 205 10766554 0.858930827 32 182 1387 0.881355932 1.363820826 0.233050847 0.131707317 0.245762712 205 20 8 208 3R:10766449-10766688 8 Cap-H2 FBtr0302571|FBtr0301311|FBtr0301310 10765896|10765896|10765896 10766756|10766756|10766756 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 3R + 10766467 10766744 stop_codon Cap-H2 FlyBase G31563.1 AGAACAAAAATAGACAAATGACTTTTTGATTGACGAAGCGCGTGTTTTGGAAATCCTCATGAGCTGATAGTACTAAATTCAAGTACCTGATCTCGTCTGTACAAAAGTATAAACATAAGAACTCTTCGGACATAAGACAAAGTTCAAGATAAATTAAGGATAAAGTGTATATATACGTATGTATTTACCAGAGTGCAAGCTAGTGTCTATTTACAATCATTTTAAGATATAATGTTTTTTTCGTAAGTATAACGTGTAGTTCTTAAGGAATAAAACGG 153 10766555 0.983348056 33 136 1043 0.8647343 1.349763044 0.173913043 0.287581699 0.473429952 153 21 7 179 3R:10766467-10766744 8 17.5 622 FBgn0037831 545.8533333 16.72666667 25.64 0.032059894 1.046233559 0.682527301 -5 -6 -5.5 0.5 dme-miR-305-5p 7mer-A1 GTACAAA 3R 10766565 10766571 + 3R_10766565_10766571_+ 0.502111248 0.443463065 0.472787156 0.041470469 Cap-H2 FBtr0301310|FBtr0302571|FBtr0301311 10765896|10765896|10765896 10766756|10766756|10766756 3R + 10766449 10766688 stop_codon Cap-H2 FlyBase G41832.1 CTATACCTCCTTTGATTTAGAACAAAAATAGACAAATGACTTTTTGATTGACGAAGCGCGTGTTTTGGAAATCCTCATGAGCTGATAGTACTAAATTCAAGTACCTGATCTCGTCTGTACAAAAGTATAAACATAAGAACTCTTCGGACATAAGACAAAGTTCAAGATAAATTAAGGATAAAGTGTATATATACGTATGTATTTACCAGAGTGCAAGCTAGTGTCTATTTACAATCATTT 205 10766554 0.858930827 32 182 1387 0.881355932 1.363820826 0.233050847 0.131707317 0.245762712 205 20 8 208 3R:10766449-10766688 7 Cap-H2 FBtr0302571|FBtr0301311|FBtr0301310 10765896|10765896|10765896 10766756|10766756|10766756 GTACAAA 7mer-A1 dme-miR-305-5p 3R + 10766467 10766744 stop_codon Cap-H2 FlyBase G31563.1 AGAACAAAAATAGACAAATGACTTTTTGATTGACGAAGCGCGTGTTTTGGAAATCCTCATGAGCTGATAGTACTAAATTCAAGTACCTGATCTCGTCTGTACAAAAGTATAAACATAAGAACTCTTCGGACATAAGACAAAGTTCAAGATAAATTAAGGATAAAGTGTATATATACGTATGTATTTACCAGAGTGCAAGCTAGTGTCTATTTACAATCATTTTAAGATATAATGTTTTTTTCGTAAGTATAACGTGTAGTTCTTAAGGAATAAAACGG 153 10766555 0.983348056 33 136 1043 0.8647343 1.349763044 0.173913043 0.287581699 0.473429952 153 21 7 179 3R:10766467-10766744 7 4.5 623 FBgn0037831 545.8533333 16.72666667 25.64 0.008243973 0.269031487 0.17550702 11 10 10.5 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 10817146 10817151 + 3R_10817146_10817151_+ 0.954499726 0.970273822 0.962386774 0.011153973 CG4089 FBtr0082281|FBtr0082281|FBtr0082281 10817111|10817111|10817111 10817490|10817490|10817490 3R + 10817120 10817177 3'utr CG4089 FlyBase G41844.1 TAATTATCTTCTTATGTAAATACTTACTGTGACATGGTAACCTCTTATGCTCAGCATT 21 10817144 0.887322493 6 21 150 1 1.342422681 0.045454545 0.047619048 0.090909091 21 0 0 22 3R:10817120-10817177 6 CG4089 FBtr0082281|FBtr0082281|FBtr0082281 10817111|10817111|10817111 10817490|10817490|10817490 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 10817129 10817188 3'utr CG4089 FlyBase G31575.1 TCTTATGTAAATACTTACTGTGACATGGTAACCTCTTATGCTCAGCATTAGTTAATTGGC 19 10817144 0.982143272 9 19 132 1 1.491361694 0.225806452 0.421052632 0.64516129 19 0 0 31 3R:10817129-10817188 6 16.5 624 FBgn0037838 56.27 3.373333333 5.153333333 0.293229074 4.891304348 3.201811125 2 2 2 0.5 dme-bantam-3p 6mer3-8 TGATCT 3R 10856097 10856102 + 3R_10856097_10856102_+ 0.811840734 0.840366537 0.826103636 0.020170787 CG4511 FBtr0302202|FBtr0082286 10855766|10855766 10856412|10856412 3R + 10856080 10856121 3'utr CG4511 FlyBase G41852.2 TAAGCGAACTCAAAATTTGATCTTTATGGTATTTGCAATTCC 37 10856096 0.671803122 10 37 337 1 1.602059991 0.375 0.081081081 0.15 37 0 0 40 3R:10856080-10856121 6 CG4511 FBtr0302202|FBtr0082286 10855766|10855766 10856412|10856412 TGATCT 6mer3-8 dme-bantam-3p 3R + 10856072 10856115 3'utr CG4511 FlyBase G31583.1 AGCGAGCTTAAGCGAACTCAAAATTTGATCTTTATGGTATTTGC 31 10856096 0.945136748 7 31 256 1 1.69019608 0.183673469 0.419354839 0.632653061 31 0 0 49 3R:10856072-10856115 6 31.5 625 FBgn0037843 1348.566667 118.0666667 181.7 0.023358133 0.266798419 0.173362686 1 1 1 0.5 dme-miR-980-3p 6mer2-7 GCAGCT 3R 11230719 11230724 - 3R_11230719_11230724_- 0.669067039 0.715277705 0.692172372 0.032675899 CG17187 FBtr0082365 11230615 11230808 3R - 11230701 11230738 3'utr CG17187 FlyBase G50088.1 AATTTAGCAACTATGCAGCTGATTTATAATACATTTAC 22 11230726 0.833959911 4 22 145 1 1.556302501 0 0.363636364 0.611111111 22 0 0 36 3R:11230701-11230738 6 CG17187 FBtr0082365 11230615 11230808 GCAGCT 6mer2-7 dme-miR-980-3p 3R - 11230709 11230738 3'utr CG17187 FlyBase G37874.1 AATTTAGCAACTATGCAGCTGATTTATAAT 28 11230726 0.78404609 5 28 170 1 1.62324929 0 0.321428571 0.547619048 28 0 0 42 3R:11230709-11230738 6 25 626 FBgn0037882 159.3333333 15.59 23.78333333 0.156903766 1.603592046 1.051156272 2 2 2 0.5 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA 3R 11232501 11232507 - 3R_11232501_11232507_- 0.732248559 0.787926415 0.760087487 0.03937015 Arfip FBtr0082364 11232427 11233081 3R - 11232455 11232538 3'utr Arfip FlyBase G50091.1 CGAGCTTGCATAATTTGAAATCATTGTTTTACTAGTCATCGTATTATTTACACTAAAATGAAGTCTATATATATATAAAAATAT 59 11232511 0.825922262 16 53 630 0.922077922 1.851258349 0.077922078 0.271186441 0.441558442 59 6 0 71 3R:11232455-11232538 7 Arfip FBtr0082364 11232427 11233081 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R - 11232460 11232550 3'utr Arfip FlyBase G37877.1 AAACTGTTTTTGCGAGCTTGCATAATTTGAAATCATTGTTTTACTAGTCATCGTATTATTTACACTAAAATGAAGTCTATATATATATAAA 54 11232510 0.800969827 19 47 529 0.91011236 1.607455023 0.224719101 0.462962963 0.674157303 54 7 1 81 3R:11232460-11232550 7 43.5 627 FBgn0037884 616.2333333 37.68 58.01666667 0.070590144 1.154458599 0.749784545 4 3 3.5 0.5 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 11466578 11466585 + 3R_11466578_11466585_+ 0.509938067 0.519100259 0.514519163 0.006478654 CG17230 FBtr0339376 11465566 11467372 3R + 11466561 11466601 3'utr CG17230 FlyBase G41999.1 TGATATCTGCATTTGTTTCCGTCCAGAGTCGAGCCATCGAA 38 11466577 0.71232571 2 37 301 0.975609756 1.602059991 0.097560976 0.078947368 0.146341463 38 1 0 40 3R:11466561-11466601 8 CG17230 FBtr0339376 11465566 11467372 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R + 11466562 11466597 3'utr CG17230 FlyBase G31688.1 GATATCTGCATTTGTTTCCGTCCAGAGTCGAGCCAT 14 11466577 0.700897143 2 14 113 1 1.322219295 0.142857143 0.5 0.666666667 14 0 0 21 3R:11466562-11466597 8 26 628 FBgn0046225 82.24 4.006666667 6.103333333 0.31614786 6.489184692 4.259967231 1 1 1 0.5 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 11585088 11585094 + 3R_11585088_11585094_+ 0.577186873 0.5846715 0.580929187 0.005292411 wkd FBtr0082413|FBtr0082414 11584642|11584642 11585305|11585305 3R + 11585004 11585227 3'utr wkd FlyBase G42038.1 GCGTAACATTTAAAACCGTAGCGTTAGCTTTGAGTTGAGGACCCCGAACATATCGTATGATTATCATGATGATTACCACCCTGAGGCAGCTGACACAAGGACTGGAGGATTATATAGTTTGAAACTTTGACTACTTTATCCGTATTAACTCTGAGACGAGAATGTTGATATTTACCTACGATAATGCGTTACGAACGACTTCTGTTGTGCCCCCGAGCCTGAAA 160 11585085 0.975565849 39 149 925 0.943589744 1.787696568 0.143589744 0.16875 0.317948718 160 9 2 184 3R:11585004-11585227 7 wkd FBtr0082413|FBtr0082414 11584642|11584642 11585305|11585305 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 11585004 11585179 3'utr wkd FlyBase G31719.1 GCGTAACATTTAAAACCGTAGCGTTAGCTTTGAGTTGAGGACCCCGAACATATCGTATGATTATCATGATGATTACCACCCTGAGGCAGCTGACACAAGGACTGGAGGATTATATAGTTTGAAACTTTGACTACTTTATCCGTATTAACTCTGAGACGAGAATGTTGATATTTACC 144 11585085 0.837263679 27 130 815 0.928571429 1.444936571 0.19047619 0.326388889 0.538095238 144 9 6 195 3R:11585004-11585179 7 62 629 FBgn0037917 354.31 20.74 31.50666667 0.174988005 2.989392478 1.967837495 3 3 3 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 11673703 11673709 + 3R_11673703_11673709_+ 0.765759318 0.760700835 0.763230076 0.0035769 CG42327 FBtr0299789|FBtr0299789|FBtr0299789 11673461|11673461|11673461 11673974|11673974|11673974 3R + 11673690 11673720 3'utr CG42327 FlyBase G42072.1 ATTCCTTTATTATTGTGATATAATCGTACAT 9 11673702 0.680148299 2 9 97 1 1.079181246 0 0.222222222 0.416666667 9 0 0 12 3R:11673690-11673720 7 CG42327 FBtr0299789|FBtr0299789|FBtr0299789 11673461|11673461|11673461 11673974|11673974|11673974 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 11673686 11673721 3'utr CG42327 FlyBase G31753.1 ATGTATTCCTTTATTATTGTGATATAATCGTACATT 12 11673702 0.689120412 4 11 137 0.9 1.255272505 0.15 0.5 0.7 12 2 0 18 3R:11673686-11673721 7 10.5 630 FBgn0259227 1487.13 32.72666667 50.52333333 0.00706058 0.320839275 0.207824767 1 1 1 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 11744632 11744638 - 3R_11744632_11744638_- 0.399492493 0.538364535 0.468928514 0.098197333 CG6923 FBtr0330169|FBtr0330169|FBtr0330169|FBtr0082433|FBtr0082433|FBtr0082433|FBtr0082432|FBtr0082432|FBtr0082432|FBtr0307892|FBtr0307892|FBtr0307892 11744481|11744481|11744481|11744481|11744481|11744481|11744227|11744227|11744227|11744481|11744481|11744481 11744911|11744911|11744911|11744938|11744938|11744938|11744938|11744938|11744938|11744938|11744938|11744938 3R - 11744625 11744649 3'utr CG6923 FlyBase G50234.1 AACAAAATTCTTGTGATAAGAATTT 5 11744638 0.628718048 2 4 32 1 0.698970004 0 0 0 5 0 0 5 3R:11744625-11744649 7 CG6923 FBtr0082432|FBtr0082432|FBtr0082432|FBtr0307892|FBtr0307892|FBtr0307892|FBtr0330169|FBtr0330169|FBtr0330169|FBtr0082433|FBtr0082433|FBtr0082433 11744227|11744227|11744227|11744481|11744481|11744481|11744481|11744481|11744481|11744481|11744481|11744481 11744938|11744938|11744938|11744938|11744938|11744938|11744911|11744911|11744911|11744938|11744938|11744938 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 11744626 11744714 3'utr CG6923 FlyBase G37989.1 AAGTATATTAAGTGATTCGGCAAATAATTTCCTATACATATGTACAAATTGTCTACGTTTTGTGAAACAAAATTCTTGTGATAAGAATT 12 11744640 0.989360084 8 9 86 0.8125 1.113943352 0.125 0.333333333 0.5 12 3 0 13 3R:11744626-11744714 7 4 631 FBgn0037944 206.3266667 5.293333333 8.143333333 0.019386733 0.755667506 0.491199345 0 2 1 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 11781589 11781595 - 3R_11781589_11781595_- 0.619532141 0.606956166 0.613244154 0.008892504 CG17360 FBtr0082531|FBtr0082531|FBtr0082531|FBtr0333819|FBtr0333819|FBtr0333819 11781129|11781129|11781129|11781129|11781129|11781129 11781819|11781819|11781819|11781819|11781819|11781819 3R - 11781519 11781658 3'utr CG17360 FlyBase G50296.1 TGCGTGCCTCCGCTTGACTCATTCATTCGTTTGCGCTTAGTAACATCTCATTTGAATAATTTTTGTGATATTAAACTTAAAGTCGCTGATCTTTGGTATGCTCTTTTGTAGGATATTTAGTTTCTATTGATTTTCTACAT 167 11781597 0.910691985 30 153 1641 0.909090909 1.67669361 0.224880383 0.221556886 0.377990431 167 16 3 190 3R:11781519-11781658 7 CG17360 FBtr0333819|FBtr0333819|FBtr0333819|FBtr0082531|FBtr0082531|FBtr0082531 11781129|11781129|11781129|11781129|11781129|11781129 11781819|11781819|11781819|11781819|11781819|11781819 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 11781530 11781663 3'utr CG17360 FlyBase G38028.1 TGTAATGCGTGCCTCCGCTTGACTCATTCATTCGTTTGCGCTTAGTAACATCTCATTTGAATAATTTTTGTGATATTAAACTTAAAGTCGCTGATCTTTGGTATGCTCTTTTGTAGGATATTTAGTTTCTATTG 100 11781597 0.746402167 24 91 974 0.919708029 2.100370545 0.116788321 0.29 0.481751825 100 11 0 126 3R:11781530-11781663 7 57.5 632 FBgn0037949 382.3133333 8.926666667 13.76333333 0.150400195 6.44137416 4.177767014 2 2 2 0.5 "dme-miR-9b-5p,dme-miR-9c-5p" 8mer-A1 ACCAAAGA 3R 11789463 11789470 - 3R_11789463_11789470_- 0.574268209 0.623591748 0.598929978 0.034876981 Sbf FBtr0082529|FBtr0082530 11789291|11789291 11789928|11789928 3R - 11789369 11789492 3'utr Sbf FlyBase G50302.1 TATATAGGTTTATAGTGAATTTACCAAAGAATATTCCACCTTTGTTGCGCAATTGAAATGCATTTCTTGATTGCTTCCTTTAAACTAAACCCTATTATTAAACGCTTTCCTTTATTTATACACT 131 11789441 0.874316674 18 123 1075 0.953333333 1.854306042 0.326666667 0.106870229 0.22 131 6 1 143 3R:11789369-11789492 8 Sbf FBtr0082529|FBtr0082530 11789291|11789291 11789928|11789928 ACCAAAGA 8mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 11789403 11789493 3'utr Sbf FlyBase G38031.1 CTATATAGGTTTATAGTGAATTTACCAAAGAATATTCCACCTTTGTTGCGCAATTGAAATGCATTTCTTGATTGCTTCCTTTAAACTAAAC 64 11789471 0.852379275 16 64 514 1 1.934498451 0.197674419 0.234375 0.430232558 64 0 0 86 3R:11789403-11789493 8 49.5 633 FBgn0025802 636.01 11.3 17.24 0.077828965 4.380530973 2.871229698 -29 1 -14 0.5 dme-miR-184-5p 6mer3-8 TGATAA 3R 11789576 11789581 - 3R_11789576_11789581_- 0.572800255 0.925056961 0.748928608 0.249083101 Sbf FBtr0082529|FBtr0082530 11789291|11789291 11789928|11789928 3R - 11789545 11789635 3'utr Sbf FlyBase G50303.1 ATGTAAAGAAACTATAAAATTATGTGATTATATAAACAAACAAAAATCAGACTATGATAAATTTACGATAAAATGGAAAAGCCACGCCCGC 27 11789589 0.976840609 9 26 167 0.966666667 1.462397998 0.033333333 0.111111111 0.2 27 1 0 29 3R:11789545-11789635 6 Sbf FBtr0082529|FBtr0082530 11789291|11789291 11789928|11789928 TGATAA 6mer3-8 dme-miR-184-5p 3R - 11789562 11789624 3'utr Sbf FlyBase G38032.1 CTATAAAATTATGTGATTATATAAACAAACAAAAATCAGACTATGATAAATTTACGATAAAAT 14 11789589 0.979362188 7 12 83 0.913043478 1.322219295 0 0.5 0.695652174 14 2 0 21 3R:11789562-11789624 6 9 634 FBgn0025802 636.01 11.3 17.24 0.014150721 0.796460177 0.522041763 8 8 8 0.5 dme-miR-308-3p 7mer-m1 TGTGATT 3R 11789607 11789613 - 3R_11789607_11789613_- 0.427574916 0.354154294 0.390864605 0.051916204 Sbf FBtr0082529|FBtr0082530 11789291|11789291 11789928|11789928 3R - 11789545 11789635 3'utr Sbf FlyBase G50303.1 ATGTAAAGAAACTATAAAATTATGTGATTATATAAACAAACAAAAATCAGACTATGATAAATTTACGATAAAATGGAAAAGCCACGCCCGC 27 11789616 0.976840609 9 26 167 0.966666667 1.462397998 0.033333333 0.111111111 0.2 27 1 0 29 3R:11789545-11789635 7 Sbf FBtr0082529|FBtr0082530 11789291|11789291 11789928|11789928 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 11789562 11789624 3'utr Sbf FlyBase G38032.1 CTATAAAATTATGTGATTATATAAACAAACAAAAATCAGACTATGATAAATTTACGATAAAAT 14 11789589 0.979362188 7 12 83 0.913043478 1.322219295 0 0.5 0.695652174 14 2 0 21 3R:11789562-11789624 7 10.5 635 FBgn0025802 636.01 11.3 17.24 0.016509174 0.92920354 0.609048724 3 -24 -10.5 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 11964971 11964978 - 3R_11964971_11964978_- 0.621398345 0.620718959 0.621058652 0.000480338 CG12213 FBtr0334155|FBtr0334155|FBtr0334155|FBtr0113223|FBtr0113223|FBtr0113223|FBtr0334156|FBtr0334156|FBtr0334156 11964672|11964672|11964672|11964672|11964672|11964672|11964672|11964672|11964672 11965424|11965424|11965424|11965424|11965424|11965424|11965424|11965424|11965424 3R - 11964929 11965003 3'utr CG12213 FlyBase G50394.1 AAATATACTCTATATACTTGGTTTTCTGTGATAAAAATAAACGCTGCGCTGCATTTGGGCAATGTTGCCTGTTTT 304 11964980 0.709617965 17 279 2986 0.915068493 1.62065648 0.046575342 0.151315789 0.293150685 304 24 7 334 3R:11964929-11965003 8 CG12213 FBtr0334156|FBtr0334156|FBtr0334156|FBtr0113223|FBtr0113223|FBtr0113223|FBtr0334155|FBtr0334155|FBtr0334155 11964672|11964672|11964672|11964672|11964672|11964672|11964672|11964672|11964672 11965424|11965424|11965424|11965424|11965424|11965424|11965424|11965424|11965424 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 11964943 11965031 3'utr CG12213 FlyBase G38088.1 TTGCTAAATCCTTACAAGTTTCATTAACAAATATACTCTATATACTTGGTTTTCTGTGATAAAAATAAACGCTGCGCTGCATTTGGGCA 178 11964980 0.692796783 15 163 1662 0.931174089 2.06069784 0.052631579 0.275280899 0.477732794 178 16 1 230 3R:11964943-11965031 8 230.5 636 FBgn0260742 1391.876667 80.28333333 122.6666667 0.165603753 2.871081586 1.879076087 2 2 2 0.5 dme-miR-14-3p 7mer-m8 AAGACTG 3R 11965085 11965091 - 3R_11965085_11965091_- 0.659282077 0.670310186 0.664796131 0.007798044 CG12213 FBtr0334155|FBtr0113223|FBtr0334156 11964672|11964672|11964672 11965424|11965424|11965424 3R - 11965012 11965152 3'utr CG12213 FlyBase G50395.1 CTCGCAGGAAATACAATACTCTGAGATGGAGCTACGAACAAATGCAGACAGATTTAAAATGAAGACTGTTTCAGTTCTGCCTTGCAAATTATTAGTCCCGAATTAGCAGTAATCGAAATCGTTGCTAAATCCTTACAAGTT 33 11965094 0.974567835 18 32 197 0.977272727 1.633468456 0.113636364 0.272727273 0.454545455 33 1 0 43 3R:11965012-11965152 7 CG12213 FBtr0334156|FBtr0113223|FBtr0334155 11964672|11964672|11964672 11965424|11965424|11965424 AAGACTG 7mer-m8 dme-miR-14-3p 3R - 11965066 11965207 3'utr CG12213 FlyBase G38089.1 AACGTCATGACTACCATCATTTCGTTAATAGCAAATGAAGAACAAGAAATTAAAACTCGCAGGAAATACAATACTCTGAGATGGAGCTACGAACAAATGCAGACAGATTTAAAATGAAGACTGTTTCAGTTCTGCCTTGCAA 23 11965084 0.976204513 13 22 143 0.96875 1.491361694 0.15625 0.347826087 0.53125 23 1 0 31 3R:11965066-11965207 7 11 637 FBgn0260742 1391.876667 80.28333333 122.6666667 0.007902999 0.137014739 0.089673913 3 -7 -2 0.5 dme-bantam-3p 6mer3-8 TGATCT 3R 12015178 12015183 - 3R_12015178_12015183_- 0.908608057 0.897488252 0.903048154 0.007862886 CG3313 FBtr0335433|FBtr0082555 12014941|12014941 12015246|12015246 3R - 12015162 12015199 3'utr CG3313 FlyBase G50438.1 GTAGTTATTCGACTTGTGATCTTTAATCTTTTGGCGCA 33 12015184 0.643515628 5 31 345 0.952380952 1.124938737 0.214285714 0.212121212 0.380952381 33 0 2 40 3R:12015162-12015199 6 CG3313 FBtr0335433|FBtr0082555 12014941|12014941 12015246|12015246 TGATCT 6mer3-8 dme-bantam-3p 3R - 12015163 12015197 3'utr CG3313 FlyBase G38113.1 AGTTATTCGACTTGTGATCTTTAATCTTTTGGCGC 20 12015179 0.615368066 6 18 186 0.961538462 1.397940009 0 0.315789474 0.5 19 1 0 25 3R:12015163-12015197 6 26 638 FBgn0037980 81.43333333 5.28 7.943333333 0.319279574 4.924242424 3.273185061 1 -4 -1.5 0.5 dme-miR-33-5p 8mer-A1 CAATGCAA 3R 12421149 12421156 + 3R_12421149_12421156_+ 0.508834231 0.611943462 0.560388847 0.072909285 pps FBtr0304744|FBtr0082586 12420906|12420906 12421251|12421251 3R + 12421110 12421214 3'utr pps FlyBase G42215.1 AACCCGCCCCGAGCTCCAAATGGATCATCCTTCGCATTGCAATGCAAATTTAGATTCGGTTTTTACATTACGCTCTAACAAATCGTGTACATTTCCTCCGAAAAT 41 12421146 0.985695043 12 40 335 1 1.672097858 0.042553191 0.146341463 0.255319149 41 0 0 47 3R:12421110-12421214 8 pps FBtr0304744|FBtr0082586 12420906|12420906 12421251|12421251 CAATGCAA 8mer-A1 dme-miR-33-5p 3R + 12421124 12421190 3'utr pps FlyBase G31855.1 TCCAAATGGATCATCCTTCGCATTGCAATGCAAATTTAGATTCGGTTTTTACATTACGCTCTAACAA 25 12421145 0.776797677 10 24 214 0.911764706 1.491361694 0.176470588 0.28 0.470588235 25 3 0 31 3R:12421124-12421190 8 19.5 639 FBgn0082831 827.4033333 14.92333333 22.97333333 0.023567708 1.306678579 0.848810215 3 4 3.5 0.5 dme-miR-34-5p 6mer2-7 ACTGCC 3R 12704760 12704765 + 3R_12704760_12704765_+ 0.821434857 0.825120216 0.823277536 0.002605901 Past1 FBtr0082655 12704080 12704875 3R + 12704742 12704809 3'utr Past1 FlyBase G42339.1 AAGAGAAACGTGCAATTTACTGCCTGTGCTTCGACTATTTTGTAATTAGTGAATTCTTGAATATTAAA 14 12704777 0.901953916 10 14 127 1 1.380211242 0.083333333 0.357142857 0.625 14 0 0 24 3R:12704742-12704809 6 Past1 FBtr0082655 12704080 12704875 ACTGCC 6mer2-7 dme-miR-34-5p 3R + 12704747 12704777 3'utr Past1 FlyBase G31962.1 AAACGTGCAATTTACTGCCTGTGCTTCGACT 8 12704759 0.611920348 6 8 59 1 1.041392685 0.181818182 0.375 0.545454545 8 0 0 11 3R:12704747-12704777 6 9 640 FBgn0016693 1355.16 61.20333333 93.61666667 0.006641282 0.147050814 0.096136728 -17 1 -8 0.5 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 12705588 12705595 - 3R_12705588_12705595_- 0.599356917 0.622647205 0.611002061 0.016468729 mus308 FBtr0082662 12705521 12705670 3R - 12705527 12705658 3'utr mus308 FlyBase G50655.1 TTTTATAGATTTGTAATCAATTTGTTTAAAGACTGAATGTTTTAGGACTGCTTGGCCTGCCACTCCGTCCATGATCCGGCATAAGCCTTGGCGCTGCAATTGATTAATAAATAATTGTACATATCTTTTAAA 210 12705595 0.982086269 23 192 1423 0.905882353 1.886490725 0.101960784 0.19047619 0.333333333 210 22 2 231 3R:12705527-12705658 8 mus308 FBtr0082662 12705521 12705670 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R - 12705560 12705653 3'utr mus308 FlyBase G38284.1 TAGATTTGTAATCAATTTGTTTAAAGACTGAATGTTTTAGGACTGCTTGGCCTGCCACTCCGTCCATGATCCGGCATAAGCCTTGGCGCTGCAA 136 12705595 0.732745538 20 126 897 0.923423423 2.010723865 0.207207207 0.463235294 0.671171171 136 16 1 205 3R:12705560-12705653 8 104 641 FBgn0002905 561.1366667 10.60333333 16.29666667 0.185338094 9.808236404 6.381673144 0 0 0 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 12985473 12985479 + 3R_12985473_12985479_+ 0.695405323 0.691878002 0.693641663 0.002494178 Paip2 FBtr0082693|FBtr0082693|FBtr0082693 12984239|12984239|12984239 12985488|12985488|12985488 3R + 12985356 12985494 3'utr Paip2 FlyBase G42359.1 AATATCGTTAAAATTCGTTTCGGCATGTAGACAAAGATGAATTTCTATTTTTTCAATCAACTTAGATTTAGTGACTTAAGACAGCATTATAAGATCTACTACATTACTTACGTTACGTGTGATATAAAGATACAAAAAA 266 12985468 0.985411281 29 227 1871 0.847560976 1.745074792 0.176829268 0.203007519 0.353658537 266 46 4 278 3R:12985356-12985494 7 Paip2 FBtr0082693|FBtr0082693|FBtr0082693 12984239|12984239|12984239 12985488|12985488|12985488 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 12985409 12985493 3'utr Paip2 FlyBase G31976.2 CAATCAACTTAGATTTAGTGACTTAAGACAGCATTATAAGATCTACTACATTACTTACGTTACGTGTGATATAAAGATACAAAAA 179 12985468 0.692630658 20 160 1228 0.891525424 1.942834494 0.183050847 0.430167598 0.654237288 179 30 2 263 3R:12985409-12985493 7 167.5 642 FBgn0038100 1800.366667 110.8333333 168.6533333 0.093036604 1.511278195 0.993161515 5 5 5 0.5 dme-miR-999-3p 7mer-A1 GTTAACA 3R 12991234 12991240 + 3R_12991234_12991240_+ 0.580204258 0.570608717 0.575406487 0.006785114 CG31342 FBtr0113404|FBtr0113403 12990027|12990767 12991543|12991543 3R + 12991173 12991247 3'utr CG31342 FlyBase G42385.1 GAATTTGTTTAGATGCGGAAAAGTTATGAGAAATTTACAACATGAAATTCAAGTATTTTAGGTTAACATATACAC 232 12991230 0.977655096 13 231 2038 0.996183206 2.416640507 0.049618321 0.099137931 0.202290076 232 1 0 261 3R:12991173-12991247 7 CG31342 FBtr0113403|FBtr0113404 12990767|12990027 12991543|12991543 GTTAACA 7mer-A1 dme-miR-999-3p 3R + 12991168 12991251 3'utr CG31342 FlyBase G32003.1 ACCTCGAATTTGTTTAGATGCGGAAAAGTTATGAGAAATTTACAACATGAAATTCAAGTATTTTAGGTTAACATATACACGCGT 187 12991230 0.904181126 12 181 1610 0.971631206 1.738780558 0.042553191 0.368983957 0.581560284 187 4 4 274 3R:12991168-12991251 7 184.5 643 FBgn0051342 1698.813333 51.87 79.48333333 0.108605222 3.556969346 2.32124135 4 4 4 0.5 dme-bantam-3p 8mer-A1 TGATCTCA 3R 13022979 13022986 + 3R_13022979_13022986_+ 0.627873599 0.629672721 0.62877316 0.001272156 CtBP FBtr0334513|FBtr0082700|FBtr0082702|FBtr0082699 13021676|13021676|13021676|13021676 13024097|13024097|13024097|13024097 3R + 13022943 13023009 3'utr CtBP FlyBase G42481.1 TATTCTGTTGCTCAAGCTCTGCTCTAATTTACAATATGATCTCATCATTCAAGTTTATTTTCGCCTT 84 13022978 0.759827641 12 81 734 0.973684211 2.045322979 0 0.261904762 0.456140351 84 3 0 111 3R:13022943-13023009 8 CtBP FBtr0082702|FBtr0082699|FBtr0334513|FBtr0082700 13021676|13021676|13021676|13021676 13024097|13024097|13024097|13024097 TGATCTCA 8mer-A1 dme-bantam-3p 3R + 13022944 13023006 3'utr CtBP FlyBase G32078.1 ATTCTGTTGCTCAAGCTCTGCTCTAATTTACAATATGATCTCATCATTCAAGTTTATTTTCGC 63 13022978 0.735181047 11 61 538 0.979381443 1.977723605 0 0.380952381 0.597938144 63 2 0 95 3R:13022944-13023006 8 68 644 FBgn0020496 3905.446667 142.2566667 217.6 0.017411581 0.478009232 0.3125 1 1 1 0.5 dme-miR-970-3p 7mer-A1 CTTATGA 3R 13312756 13312762 + 3R_13312756_13312762_+ 0.518625518 0.67852085 0.598573184 0.113063122 CG32473 FBtr0082742|FBtr0082743|FBtr0082744 13312627|13312627|13312627 13312785|13312785|13312785 3R + 13312738 13312767 3'utr CG32473 FlyBase G42559.1 AACGAAGAATTGTGATTGCTTATGATATTT 6 13312754 0.783158235 3 6 45 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3R:13312738-13312767 7 CG32473 FBtr0082744|FBtr0082743|FBtr0082742 13312627|13312627|13312627 13312785|13312785|13312785 CTTATGA 7mer-A1 dme-miR-970-3p 3R + 13312738 13312759 3'utr CG32473 FlyBase G32140.1 AACGAAGAATTGTGATTGCTTA 7 13312754 0.789544453 2 7 42 1 1.176091259 0 0.714285714 0.866666667 7 0 0 15 3R:13312738-13312759 4 6.5 645 FBgn0052473 306.7266667 12.40666667 19.06 0.021191506 0.523911875 0.341028332 2 2 2 0.5 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 13429721 13429728 - 3R_13429721_13429728_- 0.529135223 0.525097066 0.527116144 0.002855368 yrt FBtr0114376 13428865 13430186 3R - 13429603 13429761 stop_codon yrt FlyBase G50776.1 GAGCAATTATCCGGACAGCAGTCGCATTCCGTTTCCGTCCAGCAGCAACAGCAAAGACATGGTATCGCCCTGGCTGGTTTCCTCGGAGGTGGTATCGGCACCCAAGGGACGCGAGTCGGCCATCATTCGAAAATCCGTTATTACAACCCAGTTGTAATT 421 13429729 0.970743294 14 415 2392 0.985263158 1.971275849 0.170526316 0.116389549 0.216842105 421 3 4 468 3R:13429603-13429761 8 yrt FBtr0114376 13428865 13430186 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R - 13429659 13429767 3'utr yrt FlyBase G38382.1 AACTCCGAGCAATTATCCGGACAGCAGTCGCATTCCGTTTCCGTCCAGCAGCAACAGCAAAGACATGGTATCGCCCTGGCTGGTTTCCTCGGAGGTGGTATCGGCACCC 252 13429729 0.987630833 10 251 1384 0.997409326 2.284430734 0.170984456 0.396825397 0.606217617 252 0 1 385 3R:13429659-13429767 8 326 646 FBgn0004049 300.3333333 8.753333333 13.46333333 1.085460599 37.24295506 24.21391434 1 1 1 0.5 dme-miR-277-3p 7mer-m8 TGCATTT 3R 13640404 13640410 - 3R_13640404_13640410_- 0.604997313 0.617709384 0.611353348 0.008988812 sqd FBtr0082854 13637716 13642188 3R - 13640378 13640472 3'utr sqd FlyBase G50806.1 ACCACTGCTGCAGCACCCCCCCGCAGCCTCATTCGTTAGATCGTTCTTTTATTTGCTTTATTTGCATTTCCGCTGCACTTTCTTGACCAAAACGT 26 13640411 0.930024362 10 25 268 0.939393939 1.491361694 0.303030303 0.230769231 0.393939394 26 2 0 31 3R:13640378-13640472 7 sqd FBtr0082854 13637716 13642188 TGCATTT 7mer-m8 dme-miR-277-3p 3R - 13640393 13640430 3'utr sqd FlyBase G38407.1 GTTCTTTTATTTGCTTTATTTGCATTTCCGCTGCACTT 7 13640412 0.646496213 5 7 88 1 1 0.6 0.428571429 0.6 7 0 0 10 3R:13640393-13640430 7 12.5 647 FBgn0263396 13095.56667 400.09 616.6433333 0.000954522 0.03124297 0.020271037 1 2 1.5 0.5 dme-miR-33-5p 7mer-m8 CAATGCA 3R 13640735 13640741 - 3R_13640735_13640741_- 0.621889488 0.66073161 0.641310549 0.027465512 sqd FBtr0082854 13637716 13642188 3R - 13640728 13640779 3'utr sqd FlyBase G50809.1 TTATTATTCCGGCAACGGGATAATATTCACGTTCTTTGCAATGCATATGTTT 7 13640734 0.892321635 5 6 64 1 0.903089987 0.25 0.142857143 0.25 7 0 0 8 3R:13640728-13640779 7 sqd FBtr0082854 13637716 13642188 CAATGCA 7mer-m8 dme-miR-33-5p 3R - 13640720 13640752 3'utr sqd FlyBase G38410.1 CACGTTCTTTGCAATGCATATGTTTTCGTATGC 8 13640745 0.686614291 6 7 63 0.833333333 1 0 0.5 0.666666667 8 2 0 10 3R:13640720-13640752 7 6 648 FBgn0263396 13095.56667 400.09 616.6433333 0.00045817 0.014996626 0.009730098 -7 4 -1.5 0.5 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 13641265 13641271 - 3R_13641265_13641271_- 0.563542138 0.551250904 0.557396521 0.008691191 sqd FBtr0082854 13637716 13642188 3R - 13641254 13641294 3'utr sqd FlyBase G50812.1 CTTGGTTGCCTTCAACAGACTTTCCAAAGATGACAAATACC 14 13641273 0.673489021 4 14 59 1 1.278753601 0.052631579 0.214285714 0.421052632 14 0 0 19 3R:13641254-13641294 7 sqd FBtr0082854 13637716 13642188 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 13641247 13641285 3'utr sqd FlyBase G38414.1 CTTCAACAGACTTTCCAAAGATGACAAATACCTCAAACG 8 13641273 0.912057784 3 8 26 1 1.204119983 0.1875 0.375 0.6875 8 0 0 16 3R:13641247-13641285 7 10.5 649 FBgn0263396 13095.56667 400.09 616.6433333 0.000801798 0.026244095 0.017027671 2 2 2 0.5 dme-miR-263a-5p 7mer-A1 TGCCATA 3R 13642074 13642080 - 3R_13642074_13642080_- 0.600002064 0.723787206 0.661894635 0.087529284 sqd FBtr0082854 13637716 13642188 3R - 13642050 13642120 3'utr sqd FlyBase G50818.1 AAACAACAACAACCGCAGAATATAAAAACCTTCTAATTTTTGCCATAGACCTGATCTGATCCAAAATTTCC 16 13642069 0.97934253 8 15 105 1 1.278753601 0.052631579 0.266666667 0.421052632 15 0 0 19 3R:13642050-13642120 7 sqd FBtr0082854 13637716 13642188 TGCCATA 7mer-A1 dme-miR-263a-5p 3R - 13642053 13642086 3'utr sqd FlyBase G38420.1 AATTTTTGCCATAGACCTGATCTGATCCAAAATT 9 13642066 0.618280974 6 9 57 1 1.255272505 0 0.555555556 0.777777778 9 0 0 18 3R:13642053-13642086 7 10.5 650 FBgn0263396 13095.56667 400.09 616.6433333 0.000801798 0.026244095 0.017027671 -11 -14 -12.5 0.5 dme-miR-283-5p 7mer-A1 GATATTA 3R 14119650 14119656 - 3R_14119650_14119656_- 0.334377613 0.449017189 0.391697401 0.081062439 Abi FBtr0112896|FBtr0337096|FBtr0082910|FBtr0337097|FBtr0307077|FBtr0307076 14119260|14119260|14119260|14119260|14119260|14119260 14120064|14120064|14120064|14120064|14120064|14120064 3R - 14119588 14119716 3'utr Abi FlyBase G50914.1 GTAGCCGAAAACGATGCAAGAAGGGGAAAGTGAAACCGGATACCCGTGAATAACTTATGCGATATTATAAAACTGTTCCACAACCGTAGACGAATTCTGTCCTGCTCCTGCCGCCAATCCAAATACTTT 28 14119661 0.97150218 12 26 154 0.965517241 1.447158031 0.413793103 0.035714286 0.068965517 28 1 0 28 3R:14119588-14119716 7 Abi FBtr0307077|FBtr0307076|FBtr0082910|FBtr0337097|FBtr0112896|FBtr0337096 14119260|14119260|14119260|14119260|14119260|14119260 14120064|14120064|14120064|14120064|14120064|14120064 GATATTA 7mer-A1 dme-miR-283-5p 3R - 14119601 14119699 3'utr Abi FlyBase G38488.1 AAGAAGGGGAAAGTGAAACCGGATACCCGTGAATAACTTATGCGATATTATAAAACTGTTCCACAACCGTAGACGAATTCTGTCCTGCTCCTGCCGCCA 26 14119676 0.964732498 11 24 150 0.897435897 1.544068044 0.41025641 0.384615385 0.58974359 26 4 0 35 3R:14119601-14119699 7 8 651 FBgn0020510 1356.63 69.31 106.3 0.005896965 0.11542346 0.075258702 5 20 12.5 0.5 dme-miR-980-3p 6mer3-8 GGCAGC 3R 14263455 14263460 - 3R_14263455_14263460_- 0.610315243 0.777325553 0.693820398 0.118094186 trx FBtr0082950|FBtr0082948|FBtr0082947|FBtr0082949 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 3R - 14263435 14263514 3'utr trx FlyBase G50948.2 TCCTATCGGGGCGATCGGTCAGACTTGTACAGGCAAAGTTCCATAGCATTTTTTGGCAGCCATTCAAGACGCGCGCACTT 62 14263461 0.781601175 9 51 404 0.826086957 1.278753601 0.086956522 0.096774194 0.188405797 62 10 2 57 3R:14263435-14263514 6 trx FBtr0082947|FBtr0082949|FBtr0082950|FBtr0082948 14263356|14263356|14263356|14263356 14264933|14264933|14264933|14264933 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 14263436 14263520 3'utr trx FlyBase G38508.1 GTATATTCCTATCGGGGCGATCGGTCAGACTTGTACAGGCAAAGTTCCATAGCATTTTTTGGCAGCCATTCAAGACGCGCGCACT 30 14263461 0.983629459 9 24 197 0.76744186 1.041392685 0.093023256 0.366666667 0.558139535 30 8 2 33 3R:14263436-14263520 6 36 652 FBgn0003862 1984.743333 17.36 26.62333333 0.018138365 2.073732719 1.352197321 1 1 1 0.5 dme-miR-34-5p 7mer-A1 ACTGCCA 3R 14319837 14319843 + 3R_14319837_14319843_+ 0.625011056 0.648093683 0.63655237 0.016321863 pr-set7 FBtr0082930 14318757 14320494 3R + 14319720 14319876 3'utr pr-set7 FlyBase G42774.1 AAGAGATGATGATGTTGATGAAGCCACGCATTCACATTGACAAGAATCGATTGTACACTATTTATATAGATATTTATATTAGATACATGTGTAATTTCTAACTATTACGTACTATTTACTGCCATAGAGCTATACACTCCCCCTCGCACCTGTCCCA 125 14319835 0.982639671 11 119 899 0.929032258 2.158362492 0.135483871 0.184 0.341935484 125 11 0 144 3R:14319720-14319876 7 pr-set7 FBtr0082930 14318757 14320494 ACTGCCA 7mer-A1 dme-miR-34-5p 3R + 14319806 14319864 3'utr pr-set7 FlyBase G32324.1 ATGTGTAATTTCTAACTATTACGTACTATTTACTGCCATAGAGCTATACACTCCCCCTC 56 14319835 0.983604819 7 50 391 0.94047619 1.420505837 0.202380952 0.375 0.583333333 56 3 2 79 3R:14319806-14319864 7 80.5 653 FBgn0011474 544.8566667 15.96333333 24.49 0.147745279 5.042806431 3.287055941 2 2 2 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 14329921 14329927 - 3R_14329921_14329927_- 0.655505419 0.677647704 0.666576562 0.01565697 NK7.1 FBtr0306742|FBtr0306742|FBtr0306742 14329411|14329411|14329411 14330223|14330223|14330223 3R - 14329816 14329964 3'utr NK7.1 FlyBase G51025.1 CTATGGCAAATTGTAATCTGAACTTTTGAGAATTTCATGTGATAATGTATACGAGGCGATTACAAAATTGATTTTACTACTTGAACTATGAACTATACTATGTATGTAGGCCTGTAAGCTCTGCTACCCTGTAAATTGCAATTGAATGA 50 14329931 0.985662963 17 44 364 0.911764706 1.491361694 0.588235294 0.22 0.426470588 50 5 1 62 3R:14329816-14329964 7 NK7.1 FBtr0306742|FBtr0306742|FBtr0306742 14329411|14329411|14329411 14330223|14330223|14330223 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 14329885 14329962 3'utr NK7.1 FlyBase G38552.1 ATGGCAAATTGTAATCTGAACTTTTGAGAATTTCATGTGATAATGTATACGAGGCGATTACAAAATTGATTTTACTAC 46 14329931 0.988247724 10 38 348 0.825396825 0.937852093 0.492063492 0.304347826 0.492063492 46 6 5 52 3R:14329885-14329962 7 36 654 FBgn0024321 1080.813333 40.77666667 62.79666667 0.033308249 0.882857844 0.573278836 4 4 4 0.5 dme-miR-980-3p 7mer-A1 GCAGCTA 3R 14620882 14620888 - 3R_14620882_14620888_- 0.774928808 0.822644856 0.798786832 0.033740378 put FBtr0330227|FBtr0082977|FBtr0334030 14620328|14620328|14619028 14621021|14621033|14621033 3R - 14620860 14621005 3'utr put FlyBase G51122.1 CGGATCTGTGGCTCTGCAAAAAAATCAGTTGAAGCTTTTTGCTTCGTAGTGGATAGTTGATCGTCGAGGTCGTAAGACGTTTCGTTTTTAGTTTAATAGTTTGTAGTACCATTATAAGCAGCTATAGAATGGGTTGATTTATACGA 84 14620881 0.972997113 21 71 721 0.862745098 1.467361417 0.176470588 0.178571429 0.323529412 84 12 2 88 3R:14620860-14621005 7 put FBtr0334030|FBtr0330227|FBtr0082977 14619028|14620328|14620328 14621033|14621021|14621033 GCAGCTA 7mer-A1 dme-miR-980-3p 3R - 14620862 14620916 3'utr put FlyBase G38614.1 AGTTTAATAGTTTGTAGTACCATTATAAGCAGCTATAGAATGGGTTGATTTATAC 38 14620892 0.794423129 12 30 352 0.777777778 1.322219295 0.018518519 0.342105263 0.537037037 38 11 1 42 3R:14620862-14620916 7 43.5 655 FBgn0003169 711.0033333 31.18333333 47.85 0.061181148 1.394975949 0.909090909 -7 4 -1.5 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 14642862 14642867 - 3R_14642862_14642867_- 0.709063784 0.751491368 0.730277576 0.030000844 l(3)L1231 FBtr0344158|FBtr0344158|FBtr0344158 14642670|14642670|14642670 14644934|14644934|14644934 3R - 14642836 14642890 3'utr l(3)L1231 FlyBase G51131.1 ATTTTGTAATTTACGTGCATTTTTGTGATCTAATTTGTGTAACTATTATAAACGA 674 14642868 0.652736499 18 646 7278 0.958041958 1.914871818 0.350815851 0.221068249 0.388111888 674 27 9 822 3R:14642836-14642890 6 l(3)L1231 FBtr0344158|FBtr0344158|FBtr0344158 14642670|14642670|14642670 14644934|14644934|14644934 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 14642807 14643189 3'utr l(3)L1231 FlyBase G38623.1 TATGAATTCGTTCTTGAGTTAGTTGATTACCGATTACCGGGTTCACTTGATTACCGATTGAGTTGGCCCGCACTTTACTCTGATCTACTTCGCTGTGCAAGTGACGCGAACAAAATTAATGTCCTTTTTGTAGCGAAACTACAAAACCATGTATTTGATTATATGCTTTAAACCCTATTTTTATAACACTTTAATTTGTAAGAACTGTAGCGATGAACCTACAACCCCGCATCCCTCCAGTAGCCGCCTCTTTTTCACCATTTGAAGTTTTGTCTGTTTTCGGTATGAGGTACAATTTCATTTTGTAATTTACGTGCATTTTTGTGATCTAATTTGTGTAACTATTATAAACGAAAAAAAAAAGAAATACAAAATACTTTAAG 663 14642868 0.990762597 60 621 6423 0.947013487 1.816462259 0.265895954 0.404223228 0.619460501 663 41 14 983 3R:14642807-14643189 6 567 656 FBgn0086686 1443.953333 29.16666667 44.69666667 0.39267197 19.44 12.68550973 1 1 1 0.5 dme-miR-1012-3p 6mer3-8 TTGACT 3R 14698004 14698009 - 3R_14698004_14698009_- 0.860948778 0.907787787 0.884368282 0.033120175 kibra FBtr0344383 14697687 14698883 3R - 14697978 14698076 3'utr kibra FlyBase G51204.1 CATAAAAGTGAGAGAAAATATAAAATTAAACCTTGTTATGCTTTCCCAAGCGGACCTGTTAAAACTGTTGACTTTGAAACTGTGCCGTGGTGCACTGAG 22 14698003 0.806828484 13 22 151 1 1.397940009 0.2 0.136363636 0.24 22 0 0 25 3R:14697978-14698076 6 kibra FBtr0344383 14697687 14698883 TTGACT 6mer3-8 dme-miR-1012-3p 3R - 14697981 14698051 3'utr kibra FlyBase G38687.1 TTAAACCTTGTTATGCTTTCCCAAGCGGACCTGTTAAAACTGTTGACTTTGAAACTGTGCCGTGGTGCACT 16 14698009 0.983872482 8 15 117 0.961538462 1.397940009 0.153846154 0.375 0.615384615 16 1 0 25 3R:14697981-14698051 6 13.5 657 FBgn0262127 353.3166667 7.533333333 11.64333333 0.038209349 1.792035398 1.159461781 -6 0 -3 0.5 dme-miR-980-3p 7mer-A1 GCAGCTA 3R 14698372 14698378 - 3R_14698372_14698378_- 0.777243453 0.746201228 0.76172234 0.021950221 kibra FBtr0344383 14697687 14698883 3R - 14698300 14698514 3'utr kibra FlyBase G51207.1 AAAAACCAAGAAACAAGGAATATCAACACAATAACGCGCACATTGTGCGTTCAATGCCTTCAAATTCATATTGAAACCAACTGTATTCTTAAGACTTGAGCAAAAATTATACGAATGTTTATGAATATTTTTATACGCAGCTAGTTAGGATAGTTAACCCAAGCCACATATACACAAAACGTGAGGAGAACGTAAAATATTTATTATACTGATGG 73 14698383 0.99947005 30 68 537 0.938271605 1.880813592 0.160493827 0.109589041 0.197530864 73 5 0 76 3R:14698300-14698514 7 kibra FBtr0344383 14697687 14698883 GCAGCTA 7mer-A1 dme-miR-980-3p 3R - 14698205 14698473 3'utr kibra FlyBase G38689.1 ATTGTGCGTTCAATGCCTTCAAATTCATATTGAAACCAACTGTATTCTTAAGACTTGAGCAAAAATTATACGAATGTTTATGAATATTTTTATACGCAGCTAGTTAGGATAGTTAACCCAAGCCACATATACACAAAACGTGAGGAGAACGTAAAATATTTATTATACTGATGGATCGATCGACGTCGCGCTCGAATCCAGTCGTTTAGGTTAGTTAGCTTGCGTTTTTGTTAAGCTTAAAACGAATTCTTATACTGTAATTTTTTTTA 41 14698383 0.986053456 23 37 338 0.929824561 1.72427587 0.175438596 0.341463415 0.526315789 41 4 0 53 3R:14698205-14698473 7 23 658 FBgn0262127 353.3166667 7.533333333 11.64333333 0.06509741 3.053097345 1.97537933 5 5 5 0.5 dme-miR-14-3p 7mer-A1 AGACTGA 3R 14896416 14896422 + 3R_14896416_14896422_+ 0.627681658 0.695417404 0.661549531 0.047896373 CG14860 FBtr0289976 14895685 14896446 3R + 14896374 14896437 3'utr CG14860 FlyBase G42849.1 ACTGGCGGAAGAGTCCACTAAAAACACAAGAGACTAGACTTTAGACTGACTGAATAAATGTAAC 25 14896414 0.964034274 6 25 129 1 1.431363764 0.259259259 0.08 0.148148148 25 0 0 27 3R:14896374-14896437 7 CG14860 FBtr0289976 14895685 14896446 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 14896391 14896437 3'utr CG14860 FlyBase G32381.1 CTAAAAACACAAGAGACTAGACTTTAGACTGACTGAATAAATGTAAC 19 14896414 0.959361002 5 19 95 1 1.491361694 0.096774194 0.526315789 0.709677419 19 0 0 31 3R:14896391-14896437 7 21.5 659 FBgn0038273 26.21 2.003333333 3.093333333 0.820297596 10.73211314 6.950431034 2 2 2 0.5 dme-miR-965-3p 6mer2-7 ACGCTT 3R 14902713 14902718 - 3R_14902713_14902718_- 0.541932514 0.501324582 0.521628548 0.028714121 VhaPPA1-1 FBtr0083005|FBtr0308030 14902328|14902328 14903233|14903233 3R - 14902631 14902791 3'utr VhaPPA1-1 FlyBase G51290.1 GGAAATTACGACTCGCTATACGCAGTTACTGCTTGCAGGAGACGCCCGACAAACCGAAATCCGATCAGCCGTAACGCTTTAAACTAGGACTTAGTTACTCATTAAGATGATAGTTGGTTAAGTTGGCAGTTGGTTTTCACGCCTCGCACGCTCGCAGTCAC 128 14902712 0.858986765 26 119 899 0.935064935 1.681241237 0.155844156 0.1640625 0.305194805 128 8 2 144 3R:14902631-14902791 6 VhaPPA1-1 FBtr0308030|FBtr0083005 14902328|14902328 14903233|14903233 ACGCTT 6mer2-7 dme-miR-965-3p 3R - 14902667 14902793 3'utr VhaPPA1-1 FlyBase G38752.1 TTGGAAATTACGACTCGCTATACGCAGTTACTGCTTGCAGGAGACGCCCGACAAACCGAAATCCGATCAGCCGTAACGCTTTAAACTAGGACTTAGTTACTCATTAAGATGATAGTTGGTTAAGTTG 65 14902720 0.931094502 21 61 433 0.913043478 1.62324929 0.195652174 0.323076923 0.52173913 65 7 1 84 3R:14902667-14902793 6 59 660 FBgn0028662 780.9733333 70.53333333 107.34 0.075546754 0.836483932 0.549655301 -6 2 -2 0.5 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 15270283 15270289 + 3R_15270283_15270289_+ 0.495074917 0.55933263 0.527203773 0.045437055 Zip88E FBtr0290018 15270194 15270532 3R + 15270189 15270310 stop_codon Zip88E FlyBase G42935.1 GGATTAGACATCTTTTCGTTGAGAAATCGTTTCAGCGCTGTGAGAAAATGTGCCGCTTTTTAAACTTAGAACACTTAGGATAATATTATGGATTGGCAGCTGTTAATCTCTTGTGTAAGACT 91 15270282 0.836167379 17 84 783 0.912621359 1.371067862 0.126213592 0.098901099 0.203883495 91 6 3 94 3R:15270189-15270310 7 Zip88E FBtr0290018 15270194 15270532 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 15270184 15270321 stop_codon Zip88E FlyBase G32446.1 GATGAGGATTAGACATCTTTTCGTTGAGAAATCGTTTCAGCGCTGTGAGAAAATGTGCCGCTTTTTAAACTTAGAACACTTAGGATAATATTATGGATTGGCAGCTGTTAATCTCTTGTGTAAGACTTGTTACTTGTG 75 15270281 0.836996111 22 73 663 0.971962617 2.017033339 0.121495327 0.346666667 0.542056075 75 3 0 104 3R:15270184-15270321 7 51.5 661 FBgn0038312 158.6266667 12.80333333 19.79 0.324661679 4.022390003 2.602324406 1 2 1.5 0.5 dme-bantam-3p 6mer3-8 TGATCT 3R 15304848 15304853 + 3R_15304848_15304853_+ 0.669291532 0.805911072 0.737601302 0.096604646 Tm1 FBtr0089968 15303722 15304972 3R + 15304815 15304887 3'utr Tm1 FlyBase G42966.1 CTGCAACAAGAAATGGCATTAAAAATTCTAATTTGATCTATTTACGATTTACATAAATTAATTATTTATACTT 55 15304847 0.990927098 10 53 558 0.971014493 1.826074803 0.014492754 0.218181818 0.376811594 55 2 0 67 3R:15304815-15304887 6 Tm1 FBtr0089968 15303722 15304972 TGATCT 6mer3-8 dme-bantam-3p 3R + 15304772 15304888 3'utr Tm1 FlyBase G32470.1 TGATTCTGAATGCCGTGACACCCAAATGAAGATAAAACGAATGCTGCAACAAGAAATGGCATTAAAAATTCTAATTTGATCTATTTACGATTTACATAAATTAATTATTTATACTTT 44 15304847 0.988145618 12 41 379 0.953125 1.484299839 0.015625 0.363636364 0.5625 44 2 1 61 3R:15304772-15304888 6 41.5 662 FBgn0003721 5849.68 316.09 484.7266667 0.007094405 0.131291721 0.085615261 1 1 1 0.5 dme-miR-1012-3p 6mer3-8 TTGACT 3R 15342110 15342115 + 3R_15342110_15342115_+ 0.388237605 0.41576759 0.402002597 0.01946665 Aats-ser FBtr0334589 15342088 15343218 3R + 15342046 15342149 stop_codon Aats-ser FlyBase G43022.1 AACGGATACCGGAGACGAAGCTGGTCAAATTCATCAAGGCCTAGGCTTAACACATTCTGTACCTTTGACTGTTATCATTAAATCGTTGGGCTTATCAACGAAAG 222 15342103 0.987810636 18 216 1941 0.975 1.959041392 0.189285714 0.202702703 0.367857143 222 5 2 273 3R:15342046-15342149 6 Aats-ser FBtr0334589 15342088 15343218 TTGACT 6mer3-8 dme-miR-1012-3p 3R + 15342071 15342136 stop_codon Aats-ser FlyBase G32510.1 CAAATTCATCAAGGCCTAGGCTTAACACATTCTGTACCTTTGACTGTTATCATTAAATCGTTGGGC 127 15342103 0.985296864 9 124 1069 0.978947368 1.968482949 0.226315789 0.362204724 0.573684211 127 3 1 186 3R:15342071-15342136 6 169.5 663 FBgn0021750 239.2133333 16.63 25.6 0.708572543 10.19242333 6.62109375 7 7 7 0.5 dme-bantam-3p 7mer-m8 TGATCTC 3R 15349509 15349515 + 3R_15349509_15349515_+ 0.625578509 0.655982975 0.640780742 0.021499228 CG42726 FBtr0303074 15349502 15350391 3R + 15349468 15349553 stop_codon CG42726 FlyBase G43033.1 AAATATTGGTACCAAAAAGAAGAAAACACAAAGTGACGATATGATCTCTAATGAGTTGGCCCTTTTTCAAAGGGGTCCTCTAATTT 123 15349509 0.929379053 9 117 837 0.959459459 1.67516709 0.304054054 0.170731707 0.310810811 123 4 2 142 3R:15349468-15349553 7 CG42726 FBtr0303074 15349502 15350391 TGATCTC 7mer-m8 dme-bantam-3p 3R + 15349491 15349544 stop_codon CG42726 FlyBase G32519.2 AAACACAAAGTGACGATATGATCTCTAATGAGTTGGCCCTTTTTCAAAGGGGTC 79 15349509 0.629600397 6 74 529 0.93495935 2.06069784 0.422764228 0.405063291 0.617886179 79 8 0 115 3R:15349491-15349544 7 95.5 664 FBgn0261679 36.5 1.936666667 2.98 2.616438356 49.31153184 32.04697987 0 0 0 0.5 dme-miR-7-5p 7mer-m8 GTCTTCC 3R 15358864 15358870 + 3R_15358864_15358870_+ 0.580906053 0.41672916 0.498817607 0.116090599 CG5044 FBtr0083091|FBtr0083090 15358810|15358810 15359263|15359263 3R + 15358834 15358903 3'utr CG5044 FlyBase G43056.1 TTGTTTGAGCCTTGGCATCCAATCCTGTTTGTCTTCCGTTGAGCCGCTCATTCTTATATGCACACAACTT 33 15358872 0.988527127 8 32 296 0.941176471 1.028028724 0.029411765 0.03030303 0.058823529 33 0 2 32 3R:15358834-15358903 7 CG5044 FBtr0083091|FBtr0083090 15358810|15358810 15359263|15359263 GTCTTCC 7mer-m8 dme-miR-7-5p 3R + 15358839 15358916 3'utr CG5044 FlyBase G32535.1 TGAGCCTTGGCATCCAATCCTGTTTGTCTTCCGTTGAGCCGCTCATTCTTATATGCACACAACTTAATATCTTTGTAT 32 15358884 0.988470746 8 29 277 0.957446809 1.653212514 0.106382979 0.40625 0.595744681 32 2 0 45 3R:15358839-15358916 7 19 665 FBgn0038326 271.75 19.3 29.30333333 0.069917203 0.984455959 0.648390399 -8 -20 -14 0.5 dme-miR-33-5p 7mer-m8 CAATGCA 3R 15359125 15359131 + 3R_15359125_15359131_+ 0.606366767 0.605219265 0.605793016 0.000811405 CG5044 FBtr0083091|FBtr0083090 15358810|15358810 15359263|15359263 3R + 15359076 15359159 3'utr CG5044 FlyBase G43059.1 CGAGGAAGAATCCTATTCGCCGGTATTTACCAATAACGATTGTGAAATTCAATGCATTTAAATATATGATATACATATATGCCT 248 15359124 0.747358497 19 239 2059 0.963934426 1.866287339 0.055737705 0.185483871 0.337704918 248 8 3 294 3R:15359076-15359159 7 CG5044 FBtr0083091|FBtr0083090 15358810|15358810 15359263|15359263 CAATGCA 7mer-m8 dme-miR-33-5p 3R + 15359076 15359147 3'utr CG5044 FlyBase G32537.1 CGAGGAAGAATCCTATTCGCCGGTATTTACCAATAACGATTGTGAAATTCAATGCATTTAAATATATGATAT 138 15359123 0.734142341 17 132 1103 0.97029703 1.593286067 0.059405941 0.333333333 0.544554455 138 2 4 196 3R:15359076-15359147 7 163 666 FBgn0038326 271.75 19.3 29.30333333 0.599816007 8.445595855 5.56250711 1 2 1.5 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 15493142 15493147 + 3R_15493142_15493147_+ 0.885095656 0.961769845 0.92343275 0.054216776 CG5205 FBtr0083147|FBtr0083147|FBtr0083147 15492984|15492984|15492984 15493310|15493310|15493310 3R + 15493130 15493161 3'utr CG5205 FlyBase G43108.1 GCGTATTTATTGTGTGATCCTCCAAGACATGT 11 15493141 0.915054294 4 9 103 0.857142857 0.602059991 0.142857143 0.181818182 0.357142857 11 0 2 12 3R:15493130-15493161 6 CG5205 FBtr0083147|FBtr0083147|FBtr0083147 15492984|15492984|15492984 15493310|15493310|15493310 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 15493121 15493159 3'utr CG5205 FlyBase G32566.1 ACTGAACTTGCGTATTTATTGTGTGATCCTCCAAGACAT 11 15493142 0.971903474 5 10 94 0.944444444 1.230448921 0.166666667 0.454545455 0.666666667 11 1 0 17 3R:15493121-15493159 6 10.5 667 FBgn0038344 937.8966667 16.18666667 24.77666667 0.011195263 0.648682043 0.42378582 1 0 0.5 0.5 dme-miR-14-3p 7mer-A1 AGACTGA 3R 15823606 15823612 + 3R_15823606_15823612_+ 0.572310796 0.644742421 0.608526608 0.051216876 alpha-Man-IIb FBtr0083179|FBtr0345238|FBtr0334593 15822936|15822936|15822936 15824118|15824118|15824118 3R + 15823585 15823628 3'utr alpha-Man-IIb FlyBase G43158.1 AGCGTTCGCATCGATTTGTTTAGACTGATTAGCCTAAAACGATT 68 15823604 0.730388281 8 68 633 1 1.86332286 0.150684932 0.073529412 0.136986301 68 0 0 73 3R:15823585-15823628 7 alpha-Man-IIb FBtr0334593|FBtr0345238|FBtr0083179 15822936|15822936|15822936 15824118|15824118|15824118 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 15823585 15823626 3'utr alpha-Man-IIb FlyBase G32605.1 AGCGTTCGCATCGATTTGTTTAGACTGATTAGCCTAAAACGA 43 15823604 0.707266663 6 42 397 0.986111111 1.851258349 0.236111111 0.372093023 0.625 43 1 0 71 3R:15823585-15823626 7 55.5 668 FBgn0026616 98.7 2.216666667 3.413333333 0.56231003 25.03759398 16.25976563 2 2 2 0.5 dme-miR-304-5p 7mer-m8 TGAGATT 3R 15962371 15962377 - 3R_15962371_15962377_- 0.572400769 0.413384826 0.492892797 0.112441292 CG4287 FBtr0083240|FBtr0301716 15962165|15962165 15962537|15962537 3R - 15962350 15962394 3'utr CG4287 FlyBase G51636.1 AAATATGGGGACACCTATGAGATTTACAGATTTTAGTCAATTGCA 22 15962377 0.747213711 4 21 147 0.964285714 1.431363764 0.25 0.227272727 0.392857143 22 1 0 27 3R:15962350-15962394 7 CG4287 FBtr0083240|FBtr0301716 15962165|15962165 15962537|15962537 TGAGATT 7mer-m8 dme-miR-304-5p 3R - 15962349 15962390 3'utr CG4287 FlyBase G39008.1 ATGGGGACACCTATGAGATTTACAGATTTTAGTCAATTGCAA 9 15962377 0.812112578 4 9 59 1 1.176091259 0.4 0.333333333 0.6 9 0 0 15 3R:15962349-15962390 7 15.5 669 FBgn0038388 224 16.66 25.57666667 0.069196429 0.930372149 0.606021113 0 0 0 0.5 dme-miR-92b-3p 7mer-m1 TGCAATT 3R 16003938 16003944 + 3R_16003938_16003944_+ 0.484785814 0.763591529 0.624188672 0.197145401 srp FBtr0335424 16003135 16004081 3R + 16003614 16003963 3'utr srp FlyBase G43262.2 CTATCTAAAATCTATCGAATCATTAGTTGTACATACGGTCTAAATCGATTGATACTTACATTTTCGTCGAATTTTAATGGTCCACTACTCGAAATTTGTTATGAAATACTAGTTTAATTGTTAGCAAAATGCCAACAGCATAAAATCGATTCAGAAACTAGGCTAAGAATGTTCATTTAAAATTTTGTTATCAAATCGAATACCTTTTGAGATTTCCTACAATCAAATTCCACTTAGATATTAGCCACAAATCATAGTTAAGTCAACCAAAAAAAGGCAAATGAAAACGAAAAAGAATAACAATCGAAGTAACCAATAATCTCATGCAATTAGCTATTAATTTATATATT 365 16003930 0.999999402 54 346 2252 0.966442953 2.033423755 0.089485459 0.175342466 0.326621924 365 12 3 432 3R:16003614-16003963 7 srp FBtr0335424 16003135 16004081 TGCAATT 7mer-m1 dme-miR-92b-3p 3R + 16003715 16003963 3'utr srp FlyBase G32683.4 TGAAATACTAGTTTAATTGTTAGCAAAATGCCAACAGCATAAAATCGATTCAGAAACTAGGCTAAGAATGTTCATTTAAAATTTTGTTATCAAATCGAATACCTTTTGAGATTTCCTACAATCAAATTCCACTTAGATATTAGCCACAAATCATAGTTAAGTCAACCAAAAAAAGGCAAATGAAAACGAAAAAGAATAACAATCGAAGTAACCAATAATCTCATGCAATTAGCTATTAATTTATATATT 285 16003938 0.975782655 30 275 1584 0.964370546 2.608526034 0.087885986 0.343859649 0.555819477 285 15 0 406 3R:16003715-16003963 7 216.5 670 FBgn0003507 2528.6 69.84666667 106.7833333 0.085620501 3.099646845 2.027469955 8 0 4 0.5 dme-miR-278-3p 6mer3-8 CCCACC 3R 16040803 16040808 + 3R_16040803_16040808_+ 0.527241379 0.70622443 0.616732905 0.126560093 pnr FBtr0083220|FBtr0335426|FBtr0083221|FBtr0335427 16040311|16040311|16040311|16040311 16040915|16041796|16040915|16041796 3R + 16040776 16040917 3'utr pnr FlyBase G43285.1 AAATATTTTATGAGTATTCCGCACTTCCCCACCAACCCACTTAATAGAACATTTAGCAGTTAGTCCTATGTAGAAGTCTAGAATTAATATCGTAGCTCTGATCCATTTAATATGAACGCTAAATAAAGATTGTATTAAACTA 63 16040800 0.815148863 20 59 420 0.93902439 1.187520721 0.036585366 0.238095238 0.414634146 63 1 4 77 3R:16040776-16040917 6 pnr FBtr0083221|FBtr0335427|FBtr0083220|FBtr0335426 16040311|16040311|16040311|16040311 16040915|16041796|16040915|16041796 CCCACC 6mer3-8 dme-miR-278-3p 3R + 16040780 16040916 3'utr pnr FlyBase G32705.1 ATTTTATGAGTATTCCGCACTTCCCCACCAACCCACTTAATAGAACATTTAGCAGTTAGTCCTATGTAGAAGTCTAGAATTAATATCGTAGCTCTGATCCATTTAATATGAACGCTAAATAAAGATTGTATTAAACT 58 16040800 0.772440948 24 51 373 0.870588235 1.86923172 0.094117647 0.344827586 0.552941176 58 11 0 74 3R:16040780-16040916 6 17.5 671 FBgn0003117 3353.65 145.2033333 222.1433333 0.005218195 0.120520649 0.078777966 3 3 3 0.5 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 16149241 16149247 + 3R_16149241_16149247_+ 0.483628983 0.527920617 0.5057748 0.031318891 CG5916 FBtr0083251|FBtr0344009 16148765|16148765 16149389|16149636 3R + 16149221 16149273 3'utr CG5916 FlyBase G43359.1 TTACCCAACAACAAACATTTTGTGTTCTAAGTTATCTTGTTGATCAAAGAAGT 17 16149240 0.707334732 4 17 149 1 1.342422681 0.136363636 0.176470588 0.363636364 17 0 0 22 3R:16149221-16149273 7 CG5916 FBtr0083251|FBtr0344009 16148765|16148765 16149389|16149636 TGTGTTC 7mer-m8 dme-miR-317-3p 3R + 16149222 16149282 3'utr CG5916 FlyBase G32761.1 TACCCAACAACAAACATTTTGTGTTCTAAGTTATCTTGTTGATCAAAGAAGTATTTATTTT 17 16149240 0.98841743 6 16 152 0.96 1.380211242 0.48 0.352941176 0.56 17 1 0 24 3R:16149222-16149282 7 13.5 672 FBgn0038401 127.6666667 7.303333333 11.36 0.105744125 1.848471018 1.188380282 1 1 1 0.5 dme-miR-1003-3p 7mer-m8 ATGTGAG 3R 16261385 16261391 - 3R_16261385_16261391_- 0.665732997 0.380605428 0.523169213 0.201615659 bor FBtr0305998|FBtr0083276 16261353|16261353 16261833|16261833 3R - 16261380 16261442 3'utr bor FlyBase G51707.1 AACTTCTCGCTGGCTCTTCCACCAATTTCACTTGTCCGCAGTGTTTCCTATATGTGAGTATGA 9 16261392 0.991699553 7 8 82 0.8125 1.113943352 0 0.333333333 0.625 9 3 0 13 3R:16261380-16261442 7 bor FBtr0305998|FBtr0083276 16261353|16261353 16261833|16261833 ATGTGAG 7mer-m8 dme-miR-1003-3p 3R - 16261376 16261413 3'utr bor FlyBase G39057.1 ACTTGTCCGCAGTGTTTCCTATATGTGAGTATGAAGTA 7 16261394 0.63094883 5 6 58 1 0.954242509 0.333333333 0.285714286 0.444444444 7 0 0 9 3R:16261376-16261413 7 6 673 FBgn0040237 972.07 49.02666667 75.33333333 0.006172395 0.122382377 0.079646018 1 3 2 0.5 "dme-miR-275-3p,dme-miR-306-5p" 6mer3-8 GTACCT 3R 16311128 16311133 - 3R_16311128_16311133_- 0.530778565 0.690412738 0.610595651 0.112878355 Sulf1 FBtr0334699|FBtr0083273|FBtr0334700 16310540|16310540|16310540 16311180|16311180|16311180 3R - 16311047 16311155 3'utr Sulf1 FlyBase G51728.1 ACATATCCAATGCGTATCCTTTGTACCTTGCTTGCCCGCTTCTAATCTTTGGTTTGCCCCATTTAATGTTTTCATACATAAATAAGACTGTGTTTTAATCTATATTCGT 126 16311134 0.688923571 17 117 1143 0.939189189 2.1430148 0.27027027 0.134920635 0.263513514 126 9 0 139 3R:16311047-16311155 6 Sulf1 FBtr0334700|FBtr0083273|FBtr0334699 16310540|16310540|16310540 16311180|16311180|16311180 GTACCT 6mer3-8 "dme-miR-275-3p,dme-miR-306-5p" 3R - 16311105 16311152 3'utr Sulf1 FlyBase G39073.1 TATCCAATGCGTATCCTTTGTACCTTGCTTGCCCGCTTCTAATCTTTG 30 16311134 0.659523187 7 28 303 0.936170213 1.643452676 0.574468085 0.466666667 0.659574468 30 3 0 44 3R:16311105-16311152 6 45.5 674 FBgn0040271 314.1 7.876666667 12.08 0.144858325 5.776555226 3.766556291 1 1 1 0.5 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 16457729 16457736 + 3R_16457729_16457736_+ 0.382468466 0.483001564 0.432735015 0.071087637 CG14883 FBtr0083291 16457662 16458233 3R + 16457716 16457917 3'utr CG14883 FlyBase G43455.1 TACACAAACTGTTTGCATTTAGCTGGCAGAGCTTAGCCCTTAAGACAAACTTAAGTACGCATGTGTTTTTGTAGAAGCTTTAGAAAGTATTATCCCAAGCTTACCGGTACCAGTGAAATGGAAGATATAATTTAGATAGTTTATGTGCTTTACTTTTGTTTACCTGAAGCTTTTATTCATTTTATTGACGTCCTAATTTATT 210 16457728 0.876746571 28 204 1817 0.971428571 2.376576957 0.155102041 0.142857143 0.265306122 210 7 0 238 3R:16457716-16457917 8 CG14883 FBtr0083291 16457662 16458233 TGCATTTA 8mer-A1 dme-miR-277-3p 3R + 16457653 16457756 stop_codon CG14883 FlyBase G32834.1 TGAAAGCCTAAGAGTCCTTCAGGATTTGAACGAACGATAACGACTTAGATCGACGCACACACATACACAAACTGTTTGCATTTAGCTGGCAGAGCTTAGCCCTT 53 16457728 0.984126712 11 50 389 0.935064935 1.556302501 0.220779221 0.320754717 0.532467532 53 4 1 72 3R:16457653-16457756 8 51 675 FBgn0038432 123 8.256666667 12.72666667 0.414634146 6.176826807 4.007333683 1 1 1 0.5 dme-miR-308-3p 7mer-m1 TGTGATT 3R 16645060 16645066 + 3R_16645060_16645066_+ 0.483169513 0.477591949 0.480380731 0.003943959 CG10326 FBtr0083336|FBtr0333728 16644750|16644750 16645171|16645171 3R + 16644930 16645149 3'utr CG10326 FlyBase G43475.1 AACTAGCAAATCCGTGGTTCTGGCCCCATCACATCTCCTACTATAAGTTTGTAACATGTAAGACAGAAGTATTCTCGAAACGAGGCGTACGGAGAGAGAAAAAAACGCGCAACAAAAGACAAGGCATTTTTGTGATTATTTTGTGAGTTAATTGAAATTTATGATAATCCCAAGTAAGATAAAAAAAGGAACTTAAGCGTCTAATGAACTATATTTAAAT 229 16645059 0.989504324 28 216 2102 0.952702703 2.149219113 0.097972973 0.227074236 0.402027027 229 13 1 282 3R:16644930-16645149 7 CG10326 FBtr0333728|FBtr0083336 16644750|16644750 16645171|16645171 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 16644978 16645135 3'utr CG10326 FlyBase G32855.1 TTGTAACATGTAAGACAGAAGTATTCTCGAAACGAGGCGTACGGAGAGAGAAAAAAACGCGCAACAAAAGACAAGGCATTTTTGTGATTATTTTGTGAGTTAATTGAAATTTATGATAATCCCAAGTAAGATAAAAAAAGGAACTTAAGCGTCTAATG 134 16645059 0.989444456 17 124 1189 0.93442623 1.755874856 0.202185792 0.305970149 0.491803279 134 10 2 171 3R:16644978-16645135 7 146 676 FBgn0038453 605.7533333 63.22 96.46 0.241022198 2.309395761 1.513580759 1 1 1 0.5 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 16999384 16999391 + 3R_16999384_16999391_+ 0.36477843 0.352627954 0.358703192 0.00859163 CG3534 FBtr0083370 16999271 16999449 3R + 16999295 16999421 3'utr CG3534 FlyBase G43509.1 CATTCCAGTTTATACTCCGTACATTCACAAACTGATTCCTTCTTAAACGTCTCCTGTAATTGACAGAACTTAAGTGCAATTAACAAATTCTGTGATTGACGATTTATTACAAATTTATGCGAAACCA 89 16999383 0.982934586 17 84 636 0.92920354 1.322219295 0.309734513 0.179775281 0.353982301 89 4 4 105 3R:16999295-16999421 8 CG3534 FBtr0083370 16999271 16999449 CTGTGATT 8mer-m1 dme-miR-308-3p 3R + 16999317 16999409 3'utr CG3534 FlyBase G32883.1 ATTCACAAACTGATTCCTTCTTAAACGTCTCCTGTAATTGACAGAACTTAAGTGCAATTAACAAATTCTGTGATTGACGATTTATTACAAATT 59 16999383 0.761703922 13 56 393 0.957746479 1.832508913 0.225352113 0.169491525 0.309859155 59 3 0 68 3R:16999317-16999409 8 54 677 FBgn0038463 327.35 20.21 30.99 0.164961051 2.671944582 1.74249758 1 1 1 0.5 dme-bantam-3p 6mer3-8 TGATCT 3R 17389770 17389775 + 3R_17389770_17389775_+ 0.630505407 0.522442479 0.576473943 0.076412009 lute FBtr0306209|FBtr0306210|FBtr0083435|FBtr0330037 17388979|17388979|17388979|17389153 17390265|17390265|17390265|17390265 3R + 17389759 17389789 3'utr lute FlyBase G43607.1 ATACACACATCTGATCTGATAATGATAAACT 6 17389769 0.854373975 3 5 37 0.857142857 0.77815125 0.142857143 0.166666667 0.285714286 6 1 0 6 3R:17389759-17389789 6 lute FBtr0306209|FBtr0306210|FBtr0083435|FBtr0330037 17388979|17388979|17388979|17389153 17390265|17390265|17390265|17390265 TGATCT 6mer3-8 dme-bantam-3p 3R + 17389723 17389801 3'utr lute FlyBase G32960.1 ATACCAAACATATTTTTGCCAGCATATACCTAACATATACACACATCTGATCTGATAATGATAAACTATAGTCCTAAAC 9 17389769 0.984205745 7 8 63 0.9 0.653212514 0.3 0.111111111 0.2 9 0 1 9 3R:17389723-17389801 6 6.5 678 FBgn0262871 490.37 16.86 25.93333333 0.013255297 0.385527877 0.250642674 1 1 1 0.5 dme-miR-2b-2-5p 7mer-A1 TGAAGAA 3R 17674567 17674573 - 3R_17674567_17674573_- 0.766756163 0.785788077 0.77627212 0.013457586 alt FBtr0089412|FBtr0089413|FBtr0335026|FBtr0089415|FBtr0089414|FBtr0089417|FBtr0335027|FBtr0089416 17674184|17674184|17673730|17674184|17674184|17674184|17673730|17674184 17674823|17674823|17674823|17674823|17674823|17674823|17674823|17674823 3R - 17674553 17674601 3'utr alt FlyBase G52051.1 TAGTAGCGAGAACCAACAATTATGAGAATGAAGAACTATGGAACGCTTT 35 17674563 0.676865933 5 34 151 0.975609756 1.602059991 0.12195122 0.142857143 0.268292683 35 1 0 40 3R:17674553-17674601 7 alt FBtr0335027|FBtr0089416|FBtr0089414|FBtr0089417|FBtr0335026|FBtr0089415|FBtr0089412|FBtr0089413 17673730|17674184|17674184|17674184|17673730|17674184|17674184|17674184 17674823|17674823|17674823|17674823|17674823|17674823|17674823|17674823 TGAAGAA 7mer-A1 dme-miR-2b-2-5p 3R - 17674552 17674597 3'utr alt FlyBase G39302.1 AGCGAGAACCAACAATTATGAGAATGAAGAACTATGGAACGCTTTA 21 17674578 0.950765909 5 19 86 0.967741935 1.477121255 0.161290323 0.285714286 0.516129032 21 1 0 30 3R:17674552-17674597 7 27 679 FBgn0038535 6868.54 219.92 337.8266667 0.003930966 0.122771917 0.079922643 -10 5 -2.5 0.5 dme-miR-999-3p 6mer2-7 GTTAAC 3R 17688456 17688461 - 3R_17688456_17688461_- 0.682088808 0.9475957 0.814842254 0.187741729 osa FBtr0089582|FBtr0089581|FBtr0335025|FBtr0301487|FBtr0089583|FBtr0335024 17687816|17687816|17687816|17687816|17687816|17687816 17689817|17689817|17689817|17689817|17689817|17689817 3R - 17688369 17688492 3'utr osa FlyBase G52075.1 AAAAAATGAAACCCTAATGCTGTAATCTTATGTTAACTGTATTATTTGCTGGAAGTGCTGCTGCTTCGTTTTATTTTATATCGAACTTACTTAAGGCGTAAATGACAAGATAAATAATTAGGTT 45 17688475 0.978230577 17 43 376 0.924242424 1.785329835 0.242424242 0.311111111 0.53030303 45 5 0 61 3R:17688369-17688492 6 osa FBtr0089583|FBtr0335024|FBtr0335025|FBtr0301487|FBtr0089582|FBtr0089581 17687816|17687816|17687816|17687816|17687816|17687816 17689817|17689817|17689817|17689817|17689817|17689817 GTTAAC 6mer2-7 dme-miR-999-3p 3R - 17688425 17688489 3'utr osa FlyBase G39320.2 AAATGAAACCCTAATGCTGTAATCTTATGTTAACTGTATTATTTGCTGGAAGTGCTGCTGCTTCG 31 17688475 0.687210709 12 28 274 0.930232558 1.301029996 0.139534884 0.322580645 0.511627907 31 2 1 40 3R:17688425-17688489 6 19 680 FBgn0261885 4320.86 50.56333333 77.47333333 0.004397273 0.375766366 0.245245676 14 14 14 0.5 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 17809699 17809705 - 3R_17809699_17809705_- 0.664863496 0.687798269 0.676330882 0.016217353 CG18012 FBtr0332430 17809399 17810834 3R - 17809681 17809745 3'utr CG18012 FlyBase G52154.1 TCAGCTGGCCGAGCAGCTGAGGATTTGGTTCGAAAATTTTCCAAAGAATCCCAGCATCCTGGAGA 19 17809707 0.8401087 7 19 94 1 1.322219295 0.238095238 0.105263158 0.19047619 19 0 0 21 3R:17809681-17809745 7 CG18012 FBtr0332430 17809399 17810834 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 17809681 17809721 3'utr CG18012 FlyBase G39379.1 TTGGTTCGAAAATTTTCCAAAGAATCCCAGCATCCTGGAGA 11 17809708 0.678133153 3 9 60 0.75 1.079181246 0.125 0.363636364 0.5625 11 4 0 12 3R:17809681-17809721 7 13 681 FBgn0038552 964.0066667 73.48333333 112.6866667 0.013485384 0.176910864 0.115364137 2 3 2.5 0.5 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 18023164 18023171 + 3R_18023164_18023171_+ 0.603891706 0.608091984 0.605991845 0.002970061 CG7785 FBtr0083539 18022826 18023689 3R + 18023135 18023210 3'utr CG7785 FlyBase G43675.1 TTTTAGTTATTCCTTTGCCATATTTCTTCTCTAGTCAAAAAGAAAAGTTCCCAAGCTGAATTCTATCTCACAACCA 15 18023159 0.988209255 8 13 134 0.866666667 1.113943352 0.333333333 0 0 15 2 0 13 3R:18023135-18023210 8 CG7785 FBtr0083539 18022826 18023689 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 18023122 18023175 3'utr CG7785 FlyBase G33013.1 ATTTTAGTTTTAGTTTTAGTTATTCCTTTGCCATATTTCTTCTCTAGTCAAAAA 7 18023158 0.992553353 5 5 70 0.727272727 0.903089987 0 0.428571429 0.636363636 7 3 0 8 3R:18023122-18023175 8 7.5 682 FBgn0038564 104 7.253333333 11.1 0.072115385 1.034007353 0.675675676 5 6 5.5 0.5 dme-bantam-3p 6mer3-8 TGATCT 3R 18179860 18179865 - 3R_18179860_18179865_- 0.947869761 0.648759728 0.798314744 0.21150278 cdm FBtr0083619|FBtr0336472 18179711|18179273 18179916|18179916 3R - 18179851 18179899 3'utr cdm FlyBase G52192.1 AGTGGCCAAATGACATCTTTATCCATCCGGATTTTGATCTAGTTTCTAT 11 18179880 0.767583024 8 10 101 0.928571429 1.113943352 0.071428571 0.181818182 0.357142857 11 1 0 13 3R:18179851-18179899 6 cdm FBtr0083619|FBtr0336472 18179711|18179273 18179916|18179916 TGATCT 6mer3-8 dme-bantam-3p 3R - 18179837 18179927 stop_codon cdm FlyBase G39407.1 AGTTCCAGTGAAATGAGTGTATGCAATAAGTGGCCAAATGACATCTTTATCCATCCGGATTTTGATCTAGTTTCTATAATTGTATTTAGTT 11 18179865 0.993141179 7 9 108 0.846153846 1.041392685 0.076923077 0.090909091 0.230769231 11 2 0 11 3R:18179837-18179927 6 5.5 683 FBgn0261532 596.8733333 20.49333333 31.33 0.009214685 0.268379961 0.17555059 15 0 7.5 0.5 dme-miR-276a-3p 7mer-m8 AGTTCCT 3R 18193769 18193775 - 3R_18193769_18193775_- 0.48417662 0.409172334 0.446674477 0.053036049 Ssdp FBtr0330051|FBtr0083612 18192492|18192492 18194983|18195175 3R - 18193722 18193803 3'utr Ssdp FlyBase G52215.1 AAACAACTAAAATGAAAATCGTTATTTAAGTTCCTTCCAAACGGCGAGCAATAATACCATTTGTATGGCATGAGCATGAGAT 38 18193773 0.983620513 7 37 286 0.977272727 1.33243846 0.227272727 0.131578947 0.25 38 0 1 43 3R:18193722-18193803 7 Ssdp FBtr0330051|FBtr0083612 18192492|18192492 18194983|18195175 AGTTCCT 7mer-m8 dme-miR-276a-3p 3R - 18193754 18193799 3'utr Ssdp FlyBase G39422.1 AACTAAAATGAAAATCGTTATTTAAGTTCCTTCCAAACGGCGAGCA 21 18193773 0.978717758 2 21 142 1 1.505149978 0.25 0.380952381 0.59375 21 0 0 32 3R:18193754-18193799 7 28 684 FBgn0011481 1276.61 30.31666667 46.89333333 0.021933088 0.923584387 0.597099801 -2 -2 -2 0.5 dme-miR-34-5p 7mer-A1 ACTGCCA 3R 18256673 18256679 + 3R_18256673_18256679_+ 0.729578154 0.689582026 0.70958009 0.028281584 moi FBtr0299938 18256210 18257677 3R + 18256651 18256702 3'utr moi FlyBase G43742.1 AGAGGAGGACGAATCATACTTGACTGCCAACGACGATCCCGAGGATTGTGAC 21 18256670 0.954755784 5 20 93 0.956521739 1.041392685 0.086956522 0.095238095 0.173913043 21 0 1 22 3R:18256651-18256702 7 moi FBtr0299938 18256210 18257677 ACTGCCA 7mer-A1 dme-miR-34-5p 3R + 18256650 18256688 3'utr moi FlyBase G33056.1 AAGAGGAGGACGAATCATACTTGACTGCCAACGACGATC 9 18256670 0.939734668 3 9 36 1 1.301029996 0.3 0.555555556 0.8 9 0 0 20 3R:18256650-18256688 7 15 685 FBgn0261019 238.14 13.89333333 21.31333333 0.062988158 1.079654511 0.703784798 3 3 3 0.5 dme-miR-317-3p 6mer3-8 TGTGTT 3R 18400472 18400477 - 3R_18400472_18400477_- 0.991002702 0.994418109 0.992710405 0.002415053 CG12333 FBtr0083655 18400371 18400826 3R - 18400421 18400569 3'utr CG12333 FlyBase G52310.1 TATCATTGTTATAGCATACGTATGTATATGCGTTGGGACTGGGCTAAACTCTTCGGAGTGCAGAGCTTCCGATGTCCAGACCCGATTTTATCTGTGTTTTACTACCATAATACATATTATAGACGTCTAAGGCATTAACGCTTTAGCCA 30 18400479 0.990918103 12 28 303 0.885714286 1.491361694 0.228571429 0.166666667 0.285714286 30 4 0 31 3R:18400421-18400569 6 CG12333 FBtr0083655 18400371 18400826 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 18400463 18400544 3'utr CG12333 FlyBase G39497.1 ATATGCGTTGGGACTGGGCTAAACTCTTCGGAGTGCAGAGCTTCCGATGTCCAGACCCGATTTTATCTGTGTTTTACTACCA 17 18400480 0.99169923 8 15 173 0.923076923 1.079181246 0.384615385 0.411764706 0.615384615 17 1 1 24 3R:18400463-18400544 6 16 686 FBgn0038617 154.6666667 8.656666667 13.23 0.103448276 1.848286484 1.209372638 2 3 2.5 0.5 dme-miR-8-3p 7mer-A1 AGTATTA 3R 18406894 18406900 - 3R_18406894_18406900_- 0.549753194 0.581596896 0.565675045 0.022516896 CG31122 FBtr0083653|FBtr0301432|FBtr0333831 18406629|18406629|18406062 18407464|18407881|18407881 3R - 18406844 18406925 3'utr CG31122 FlyBase G52316.1 ACACACCCACAAAGCCCTCTGATTAAGTATTACTTAGCGTACGTAAGCTAACTTTAAGTTGCAACTGGCAAAAAGCAAGCCA 49 18406903 0.989206283 7 43 409 0.873015873 1.263241435 0.079365079 0.244897959 0.412698413 49 6 2 55 3R:18406844-18406925 7 CG31122 FBtr0333831|FBtr0301432|FBtr0083653 18406062|18406629|18406629 18407881|18407881|18407464 AGTATTA 7mer-A1 dme-miR-8-3p 3R - 18406865 18406988 3'utr CG31122 FlyBase G39503.1 CCAATGAATTTATACATCATCCGCACAGACGCATTAATCTAACCAGCCTAAAATCTAAATCACACACACCCACAAAGCCCTCTGATTAAGTATTACTTAGCGTACGTAAGCTAACTTTAAGTTG 35 18406903 0.985723309 12 33 260 0.96 1.681241237 0.02 0.285714286 0.5 35 2 0 48 3R:18406865-18406988 7 37 687 FBgn0051122 626.0666667 23.62 36.17666667 0.059099137 1.566469094 1.022758684 3 3 3 0.5 dme-miR-965-3p 7mer-m8 TACGCTT 3R 18407474 18407480 - 3R_18407474_18407480_- 0.616643839 0.555615747 0.586129793 0.043153383 CG31122 FBtr0301432|FBtr0333831 18406629|18406062 18407881|18407881 3R - 18407307 18407517 3'utr CG31122 FlyBase G52320.1 AGTGTCGCTCGAAACGCAAACTGCAGAAATTGTATTATACGCTTTGCCGTTAGATCTGTAGCCTAACTATATCTATGTGTACTTGTACGAGAGAAAGTTTCTTAGAACCACCAGCAGCATCAGCACTTAGCTTAAGTGGAGTCACACCTACCACGTCCTATATATATTATATGTATGTCCAGTCCCTTCGTCCCTTCATTTTTTGTACATG 77 18407474 0.986065146 27 70 615 0.917647059 1.591064607 0.129411765 0.090909091 0.176470588 77 6 1 78 3R:18407307-18407517 7 CG31122 FBtr0333831|FBtr0301432 18406062|18406629 18407881|18407881 TACGCTT 7mer-m8 dme-miR-965-3p 3R - 18407349 18407525 3'utr CG31122 FlyBase G39506.1 TCATCATCAGTGTCGCTCGAAACGCAAACTGCAGAAATTGTATTATACGCTTTGCCGTTAGATCTGTAGCCTAACTATATCTATGTGTACTTGTACGAGAGAAAGTTTCTTAGAACCACCAGCAGCATCAGCACTTAGCTTAAGTGGAGTCACACCTACCACGTCCTATATATATTA 65 18407473 0.986390105 20 61 519 0.948453608 1.662757832 0.164948454 0.384615385 0.587628866 65 4 1 92 3R:18407349-18407525 7 42.5 688 FBgn0051122 626.0666667 23.62 36.17666667 0.067884144 1.799322608 1.174790381 -6 -7 -6.5 0.5 dme-miR-283-5p 8mer-m1 TGATATTT 3R 18415187 18415194 - 3R_18415187_18415194_- 0.496740179 0.505999238 0.501369708 0.006547102 fru FBtr0083644 18414271 18416776 3R - 18415174 18415210 3'utr fru FlyBase G52333.1 AATATAAAATTAAATGTGATATTTTCGGCACAAAACT 8 18415188 0.981056465 5 6 71 0.727272727 0.602059991 0 0.25 0.454545455 8 2 1 8 3R:18415174-18415210 8 fru FBtr0083644 18414271 18416776 TGATATTT 8mer-m1 dme-miR-283-5p 3R - 18415181 18415217 3'utr fru FlyBase G39515.1 AATATAAAATATAAAATTAAATGTGATATTTTCGGCA 11 18415187 0.650741089 6 11 98 1 1.176091259 0 0.272727273 0.466666667 11 0 0 15 3R:18415181-18415217 8 9.5 689 FBgn0004652 1186.113333 24.98 38.30666667 0.008009353 0.380304243 0.247998608 -6 -7 -6.5 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 18420163 18420169 - 3R_18420163_18420169_- 0.73726148 0.736358281 0.736809881 0.000638659 fru FBtr0330040|FBtr0330040|FBtr0330040|FBtr0083640|FBtr0083640|FBtr0083640|FBtr0083650|FBtr0083650|FBtr0083650|FBtr0083645|FBtr0083645|FBtr0083645 18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714 18422076|18422076|18422076|18422637|18422637|18422637|18422637|18422637|18422637|18422637|18422637|18422637 3R - 18420146 18420223 3'utr fru FlyBase G52350.1 ATTTTTAACGCTGTTTTGTTAAACAAAAATTTAAGAAATTTATCTATTATATGATGTGATAACTATAGTAAAACTAAA 38 18420172 0.651270559 12 30 348 0.840909091 1.568201724 0.045454545 0.105263158 0.227272727 38 7 0 37 3R:18420146-18420223 7 fru FBtr0083650|FBtr0083650|FBtr0083650|FBtr0083645|FBtr0083645|FBtr0083645|FBtr0083640|FBtr0083640|FBtr0083640|FBtr0330040|FBtr0330040|FBtr0330040 18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714|18418714 18422637|18422637|18422637|18422637|18422637|18422637|18422637|18422637|18422637|18422076|18422076|18422076 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 18420146 18420191 3'utr fru FlyBase G39531.1 AAGAAATTTATCTATTATATGATGTGATAACTATAGTAAAACTAAA 34 18420172 0.622556018 8 29 299 0.823529412 1.021189299 0 0.382352941 0.588235294 34 6 3 42 3R:18420146-18420191 7 32 690 FBgn0004652 1186.113333 24.98 38.30666667 0.026978872 1.28102482 0.835363731 3 3 3 0.5 dme-miR-12-5p 7mer-A1 ATACTCA 3R 18422039 18422045 - 3R_18422039_18422045_- 0.570562691 0.571088655 0.570825673 0.000371938 fru FBtr0330040|FBtr0083640|FBtr0083650|FBtr0083645 18418714|18418714|18418714|18418714 18422076|18422637|18422637|18422637 3R - 18422015 18422075 3'utr fru FlyBase G52356.1 AACAGCAACAGCAGCAACAGCAACCAATTGATACTCAAAGCAAATGTAATTTAGACGAGAA 351 18422047 0.909494402 5 347 1100 0.990498812 2.620136055 0.042755344 0.179487179 0.315914489 351 4 0 417 3R:18422015-18422075 7 fru FBtr0083650|FBtr0083645|FBtr0083640|FBtr0330040 18418714|18418714|18418714|18418714 18422637|18422637|18422637|18422076 ATACTCA 7mer-A1 dme-miR-12-5p 3R - 18422022 18422072 3'utr fru FlyBase G39536.1 AGCAACAGCAGCAACAGCAACCAATTGATACTCAAAGCAAATGTAATTTAG 195 18422047 0.913703431 5 189 614 0.971061093 2.178976947 0.064308682 0.41025641 0.63022508 195 8 1 302 3R:18422022-18422072 7 271.5 691 FBgn0004652 1186.113333 24.98 38.30666667 0.228898869 10.86869496 7.087539158 2 2 2 0.5 dme-miR-980-3p 8mer-A1 GGCAGCTA 3R 18431318 18431325 - 3R_18431318_18431325_- 0.645676126 0.647768061 0.646722094 0.001479267 fru FBtr0083647 18431231 18431446 3R - 18431303 18431350 5'utr fru FlyBase G52369.1 AATATATTTAGTAACCTAAGAACTTGGCAGCTACTATGAACAAAAGCA 119 18431326 0.83458356 6 115 727 0.95035461 1.826074803 0.014184397 0.168067227 0.29787234 119 6 1 134 3R:18431303-18431350 8 fru FBtr0083647 18431231 18431446 GGCAGCTA 8mer-A1 dme-miR-980-3p 3R - 18431303 18431350 5'utr fru FlyBase G39543.1 AATATATTTAGTAACCTAAGAACTTGGCAGCTACTATGAACAAAAGCA 63 18431326 0.819567414 6 61 363 0.968421053 1.963787827 0.063157895 0.333333333 0.557894737 63 3 0 92 3R:18431303-18431350 8 91 692 FBgn0004652 1186.113333 24.98 38.30666667 0.076721168 3.642914331 2.375565611 1 1 1 0.5 dme-miR-7-5p 6mer2-7 TCTTCC 3R 18650839 18650844 - 3R_18650839_18650844_- 0.707241361 0.893272322 0.800256841 0.131543711 CG31224 FBtr0344327|FBtr0083691|FBtr0344326 18650119|18650119|18650119 18651140|18651140|18651140 3R - 18650782 18650875 3'utr CG31224 FlyBase G52401.1 ACGTAGCTAAATGTGAAAGTGTTCCCCATTCTCTTCCTCCGGATTCGAATCACAATTCGCGTCAACCGCTTTAATCCCGTTTAGGTTTTAGATT 22 18650842 0.985943217 9 21 182 0.958333333 1.361727836 0.291666667 0.090909091 0.166666667 22 1 0 23 3R:18650782-18650875 6 CG31224 FBtr0344326|FBtr0083691|FBtr0344327 18650119|18650119|18650119 18651140|18651140|18651140 TCTTCC 6mer2-7 dme-miR-7-5p 3R - 18650782 18650861 3'utr CG31224 FlyBase G39568.1 GAAAGTGTTCCCCATTCTCTTCCTCCGGATTCGAATCACAATTCGCGTCAACCGCTTTAATCCCGTTTAGGTTTTAGATT 10 18650844 0.982479117 8 10 79 1 1.146128036 0.071428571 0.3 0.5 10 0 0 14 3R:18650782-18650861 6 10 693 FBgn0051224 1247.72 20.83666667 31.93333333 0.008014619 0.479923212 0.313152401 -2 0 -1 0.5 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 18674633 18674640 + 3R_18674633_18674640_+ 0.468336874 0.375917518 0.422127196 0.065350384 CG7702 FBtr0083665|FBtr0083664 18674410|18674410 18674679|18674679 3R + 18674606 18674648 3'utr CG7702 FlyBase G43809.1 TAGTGAAGCCATCGATGTTTGTGTATTGTACTTAAGATCCGCA 9 18674632 0.961283387 6 9 82 1 1.041392685 0.090909091 0.111111111 0.272727273 9 0 0 11 3R:18674606-18674648 8 CG7702 FBtr0083665|FBtr0083664 18674410|18674410 18674679|18674679 GTACTTAA 8mer-A1 dme-miR-252-5p 3R + 18674610 18674648 3'utr CG7702 FlyBase G33103.1 GAAGCCATCGATGTTTGTGTATTGTACTTAAGATCCGCA 6 18674632 0.988110251 3 5 56 1 1 0 0.333333333 0.6 6 0 0 10 3R:18674610-18674648 8 6.5 694 FBgn0038638 520.81 26.77666667 41.05 0.012480559 0.242748662 0.158343484 1 1 1 0.5 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 18759343 18759350 - 3R_18759343_18759350_- 0.366910794 0.351501409 0.359206102 0.010896091 CG7720 FBtr0083679|FBtr0301200|FBtr0301199|FBtr0339167|FBtr0301201|FBtr0083678 18759234|18759234|18759234|18759234|18759234|18759234 18759467|18759467|18759467|18759467|18759467|18759467 3R - 18759261 18759378 3'utr CG7720 FlyBase G52513.1 AGCCAAGTGTTTCATGTCTATAAAGATGCTGTGATTTTCTGTGCGCGACTGTTGTTGAGCAATTGCTCGCGCATTTCATTCGCATGTACTTAACGCATATGTGTGTGCGTGTCAGCAT 93 18759352 0.858397016 14 89 865 0.964285714 2.033423755 0.080357143 0.193548387 0.330357143 93 4 0 108 3R:18759261-18759378 8 CG7720 FBtr0301201|FBtr0083678|FBtr0301199|FBtr0339167|FBtr0083679|FBtr0301200 18759234|18759234|18759234|18759234|18759234|18759234 18759467|18759467|18759467|18759467|18759467|18759467 CTGTGATT 8mer-m1 dme-miR-308-3p 3R - 18759324 18759374 3'utr CG7720 FlyBase G39641.1 AAGTGTTTCATGTCTATAAAGATGCTGTGATTTTCTGTGCGCGACTGTTGT 69 18759352 0.867694423 8 68 678 0.981981982 2.037426498 0.081081081 0.376811594 0.612612613 69 2 0 109 3R:18759324-18759374 8 72.5 695 FBgn0038652 105.2733333 4.686666667 7.096666667 0.688683427 15.46941679 10.21606388 2 2 2 0.5 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 19139080 19139087 - 3R_19139080_19139087_- 0.386805309 0.535708152 0.46125673 0.10529025 Ppcs FBtr0083752|FBtr0330044 19139052|19139052 19141595|19141415 3R - 19139068 19139108 3'utr Ppcs FlyBase G52566.1 TGTATTAAACTGGAAATGAAATAGCTTTAAATGTATAGACA 6 19139088 0.869527985 3 6 46 1 0.77815125 0.166666667 0 0 6 0 0 6 3R:19139068-19139108 8 Ppcs FBtr0083752|FBtr0330044 19139052|19139052 19141595|19141415 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R - 19139069 19139109 3'utr Ppcs FlyBase G39679.1 GTGTATTAAACTGGAAATGAAATAGCTTTAAATGTATAGAC 5 19139087 0.980026608 4 4 29 0.777777778 0.84509804 0.333333333 0.8 0.888888889 5 2 0 7 3R:19139069-19139109 8 5 696 FBgn0261285 111.1666667 3.44 5.32 0.044977511 1.453488372 0.939849624 1 0 0.5 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 19148727 19148734 - 3R_19148727_19148734_- 0.631393648 0.632835149 0.632114399 0.001019294 CG5835 FBtr0083751|FBtr0083751|FBtr0083751 19148630|19148630|19148630 19149037|19149037|19149037 3R - 19148654 19148757 3'utr CG5835 FlyBase G52579.1 AAGACCAATTAGTTAGTAAGTTTCTGTGATATTGTTCTAGAGATTCTTTTGTACGTCCTTGCACTAACAATACGCATAGAACCCACGTTGCTAATCGATAATAA 65 19148735 0.993584955 20 60 743 0.950617284 1.58546073 0.061728395 0.2 0.358024691 65 3 1 77 3R:19148654-19148757 8 CG5835 FBtr0083751|FBtr0083751|FBtr0083751 19148630|19148630|19148630 19149037|19149037|19149037 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 19148691 19148755 3'utr CG5835 FlyBase G39688.1 GACCAATTAGTTAGTAAGTTTCTGTGATATTGTTCTAGAGATTCTTTTGTACGTCCTTGCACTAA 47 19148735 0.660163736 11 42 567 0.893333333 1.348953548 0.093333333 0.468085106 0.666666667 47 6 2 67 3R:19148691-19148755 8 50.5 697 FBgn0038682 101.3333333 9.206666667 14.04333333 0.498355263 5.485155684 3.596012343 1 1 1 0.5 dme-bantam-3p 6mer3-8 TGATCT 3R 19633731 19633736 - 3R_19633731_19633736_- 0.945385906 0.662577315 0.80398161 0.199975879 subdued FBtr0334922|FBtr0083806|FBtr0334921|FBtr0083805|FBtr0302492 19633416|19633416|19633416|19633416|19633416 19633928|19633928|19633928|19633928|19633928 3R - 19633668 19633756 3'utr subdued FlyBase G52653.1 ATTTAGGTAATCCAATTTTATGATCTGTTAATTGAAAATGATTTATTAAGTGGCTCAAACTTATATTTATGCAGCCCAAGTGAGTGCCA 21 19633735 0.990438205 6 21 213 1 1.361727836 0.043478261 0.095238095 0.173913043 21 0 0 23 3R:19633668-19633756 6 subdued FBtr0334922|FBtr0302492|FBtr0083805|FBtr0334921|FBtr0083806 19633416|19633416|19633416|19633416|19633416 19633928|19633928|19633928|19633928|19633928 TGATCT 6mer3-8 dme-bantam-3p 3R - 19633693 19633753 3'utr subdued FlyBase G39737.1 TAGGTAATCCAATTTTATGATCTGTTAATTGAAAATGATTTATTAAGTGGCTCAAACTTAT 15 19633736 0.988004308 7 13 134 0.96 1.380211242 0 0.466666667 0.68 15 1 0 24 3R:19633693-19633753 6 14.5 698 FBgn0038721 940.6666667 28.25333333 43.49 0.0154146 0.51321378 0.333409979 -1 0 -0.5 0.5 dme-miR-283-5p 8mer-A1 TGATATTA 3R 19698583 19698590 + 3R_19698583_19698590_+ 0.492206569 0.589762288 0.540984429 0.068982297 Naam FBtr0335415 19698182 19698742 3R + 19698548 19698603 3'utr Naam FlyBase G43962.1 CTTAATGTTGTGCGCTGCACCTGTTTGAATCAAATTGATATTATATACAACCAACA 32 19698582 0.745180718 8 21 294 0.641025641 1.397940009 0.256410256 0.1875 0.333333333 32 14 0 25 3R:19698548-19698603 8 Naam FBtr0335415 19698182 19698742 TGATATTA 8mer-A1 dme-miR-283-5p 3R + 19698542 19698593 3'utr Naam FlyBase G33215.1 AGGGTTCTTAATGTTGTGCGCTGCACCTGTTTGAATCAAATTGATATTATAT 19 19698573 0.96710979 6 12 191 0.535714286 0.875061263 0.035714286 0.263157895 0.5 19 12 1 15 3R:19698542-19698593 8 24 699 FBgn0051216 617.35 42.02 64.22 0.03887584 0.571156592 0.373715353 1 10 5.5 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 19854208 19854215 - 3R_19854208_19854215_- 0.473978969 0.518644945 0.496311957 0.031583561 Ire1 FBtr0113248|FBtr0113248|FBtr0113248 19853906|19853906|19853906 19854439|19854439|19854439 3R - 19854037 19854369 3'utr Ire1 FlyBase G52691.1 TTAATCGTGCAATTTGTGTATATGCAACTATTCCAAAATGATTCCCAATTCAGTTCTTAGCAAAAATATTCAACGGTAAGTAAACAAATGAAACTATTTTGTATACCAAGTAAGAATAATGTAGTGTGTCTTCTGTCGAATGCACGGAATTTAACTGTGATAATTTTTGATTTTGTTCAATGCCCAAGTGCAAGTTGATCTAGACAAATAGTTCGAGTTTTATATATAGTACCTAGACTTATTGTATATTTATGCATTAGTTAAGACACACCTACCTATCCCAACACTCCTCCCATTCGTGGAGATCCTTGACAAGCGAAGTTTTTAGTTTTT 873 19854219 0.834446738 64 805 6870 0.922800718 1.898049762 0.31508079 0.213058419 0.383303411 873 74 12 1028 3R:19854037-19854369 8 Ire1 FBtr0113248|FBtr0113248|FBtr0113248 19853906|19853906|19853906 19854439|19854439|19854439 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 19854032 19854368 3'utr Ire1 FlyBase G39769.1 TAATCGTGCAATTTGTGTATATGCAACTATTCCAAAATGATTCCCAATTCAGTTCTTAGCAAAAATATTCAACGGTAAGTAAACAAATGAAACTATTTTGTATACCAAGTAAGAATAATGTAGTGTGTCTTCTGTCGAATGCACGGAATTTAACTGTGATAATTTTTGATTTTGTTCAATGCCCAAGTGCAAGTTGATCTAGACAAATAGTTCGAGTTTTATATATAGTACCTAGACTTATTGTATATTTATGCATTAGTTAAGACACACCTACCTATCCCAACACTCCTCCCATTCGTGGAGATCCTTGACAAGCGAAGTTTTTAGTTTTTATATC 625 19854219 0.942288322 59 570 4917 0.919732441 1.962211439 0.275362319 0.3248 0.529542921 625 64 8 825 3R:19854032-19854368 8 416.5 700 FBgn0261984 824.9233333 24.51333333 37.36 0.504895404 16.99075333 11.14828694 4 4 4 0.5 dme-miR-970-3p 8mer-A1 TCTTATGA 3R 19913878 19913885 + 3R_19913878_19913885_+ 0.506766592 0.401606285 0.454186439 0.074359561 RhoGAP92B FBtr0344354 19913083 19914272 3R + 19913850 19913890 3'utr RhoGAP92B FlyBase G44028.1 GCGCGTAGTGTATGTTAGAATGTGGATCTCTTATGAAATTG 11 19913880 0.864861084 3 11 93 1 1.079181246 0.333333333 0.090909091 0.166666667 11 0 0 12 3R:19913850-19913890 8 RhoGAP92B FBtr0344354 19913083 19914272 TCTTATGA 8mer-A1 dme-miR-970-3p 3R + 19913856 19913884 3'utr RhoGAP92B FlyBase G33268.1 AGTGTATGTTAGAATGTGGATCTCTTATG 6 19913880 0.70697278 3 6 55 1 1.041392685 0.454545455 0.666666667 0.818181818 6 0 0 11 3R:19913856-19913884 7 8.5 701 FBgn0038747 1846.786667 74.18 113.18 0.004602589 0.114586142 0.075101608 -2 -2 -2 0.5 dme-miR-7-5p 8mer-A1 GTCTTCCA 3R 20301716 20301723 + 3R_20301716_20301723_+ 0.466967872 0.497697674 0.482332773 0.02172925 cic FBtr0334305 20300626 20303942 3R + 20301608 20301738 3'utr cic FlyBase G44097.1 TAAATTGTAAACATACCGAAAAATAAACTCTAAAAAGAAAATAATTCAAAAAACTTATTACCGACGATTGAAAGAATACAAACCAGAGAGAGAATGAGAGAACTAACTGTCTTCCACTGTTGCTGCAATAT 384 20301702 0.928908577 21 359 1960 0.939953811 1.831443159 0.233256351 0.1171875 0.217090069 384 21 5 407 3R:20301608-20301738 8 cic FBtr0334305 20300626 20303942 GTCTTCCA 8mer-A1 dme-miR-7-5p 3R + 20301647 20301850 3'utr cic FlyBase G33316.1 AATAATTCAAAAAACTTATTACCGACGATTGAAAGAATACAAACCAGAGAGAGAATGAGAGAACTAACTGTCTTCCACTGTTGCTGCAATATACTATTTAATATTGTTTACCATTTCGGTTCGATTAAATTTAGTTGTAAATTAATGTTTTAAGTATGGACTGCATTTTATTCATATGCAAAATTCTGTTCATTGTGAGTTGTT 221 20301702 0.9341476 31 208 1341 0.93993994 1.893484346 0.243243243 0.371040724 0.582582583 221 17 3 313 3R:20301647-20301850 8 231 702 FBgn0262582 2700.526667 30.66 46.83666667 0.08553887 7.534246575 4.932033307 14 14 14 0.5 dme-miR-14-3p 7mer-m8 AAGACTG 3R 20582041 20582047 - 3R_20582041_20582047_- 0.621948118 0.572649287 0.597298702 0.034859516 CG16953 FBtr0300803 20581768 20582499 3R - 20582004 20582158 3'utr CG16953 FlyBase G52841.1 ACGCACACACTTGCTCATCGATGGCCAAAATGTGGAGTAACAAGCATCCATTGGACCGCAATCAGTTCCAGGATTTGGGAACGCAACTGCAGATCCCTTTGGATATTGATAAAGACTGTCTTTGTTCTAAAAGCAAAAGTAAATCTGGTTAAAAA 84 20582050 0.905696364 22 80 529 0.958762887 1.968482949 0.092783505 0.119047619 0.237113402 84 4 0 93 3R:20582004-20582158 7 CG16953 FBtr0300803 20581768 20582499 AAGACTG 7mer-m8 dme-miR-14-3p 3R - 20582025 20582096 3'utr CG16953 FlyBase G39889.1 CAGTTCCAGGATTTGGGAACGCAACTGCAGATCCCTTTGGATATTGATAAAGACTGTCTTTGTTCTAAAAGC 27 20582050 0.908371874 10 24 224 0.928571429 1.290034611 0.238095238 0.333333333 0.571428571 27 2 1 39 3R:20582025-20582096 7 25 703 FBgn0038809 1215.62 52.09333333 79.63 0.020565637 0.479907858 0.313952028 3 3 3 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 20611535 20611541 + 3R_20611535_20611541_+ 0.625907314 0.677595072 0.651751193 0.036548794 bon FBtr0334639|FBtr0334639|FBtr0334639|FBtr0334637|FBtr0334637|FBtr0334637|FBtr0330043|FBtr0330043|FBtr0330043|FBtr0300617|FBtr0300617|FBtr0300617|FBtr0334638|FBtr0334638|FBtr0334638|FBtr0083912|FBtr0083912|FBtr0083912 20610835|20610835|20610835|20610835|20610835|20610835|20611057|20611057|20611057|20610835|20610835|20610835|20610835|20610835|20610835|20610835|20610835|20610835 20612540|20612540|20612540|20612540|20612540|20612540|20612540|20612540|20612540|20611624|20611624|20611624|20612540|20612540|20612540|20612540|20612540|20612540 3R + 20611448 20611553 3'utr bon FlyBase G44186.1 CGAGTGAAATTGACATCCTTGTTTCACCGATTTGTGTTTGGGATGGAACCCGTTCTAACCAATCTTTGTTGGAATTGTATTTACTTTTGTGATAGCGAAAAACAAT 89 20611533 0.988943185 18 82 774 0.914529915 1.330413773 0.179487179 0.213483146 0.401709402 89 6 4 107 3R:20611448-20611553 7 bon FBtr0334638|FBtr0334638|FBtr0334638|FBtr0083912|FBtr0083912|FBtr0083912|FBtr0330043|FBtr0330043|FBtr0330043|FBtr0300617|FBtr0300617|FBtr0300617|FBtr0334639|FBtr0334639|FBtr0334639|FBtr0334637|FBtr0334637|FBtr0334637 20610835|20610835|20610835|20610835|20610835|20610835|20611057|20611057|20611057|20610835|20610835|20610835|20610835|20610835|20610835|20610835|20610835|20610835 20612540|20612540|20612540|20612540|20612540|20612540|20612540|20612540|20612540|20611624|20611624|20611624|20612540|20612540|20612540|20612540|20612540|20612540 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 20611514 20611577 3'utr bon FlyBase G33387.2 TGTTGGAATTGTATTTACTTTTGTGATAGCGAAAAACAATAAGATGAACAAATTACCGTTTATT 54 20611533 0.797691555 12 49 448 0.905405405 1.224014811 0.189189189 0.296296296 0.486486486 54 4 3 67 3R:20611514-20611577 7 49.5 704 FBgn0023097 953.03 20.03333333 30.79333333 0.051939603 2.470881864 1.607490799 2 2 2 0.5 dme-miR-14-3p 7mer-A1 AGACTGA 3R 20627229 20627235 + 3R_20627229_20627235_+ 0.805684519 0.649390254 0.727537387 0.110516689 H FBtr0083914|FBtr0083916|FBtr0083917|FBtr0083915 20626787|20626787|20626787|20626787 20628915|20627251|20628915|20627251 3R + 20627212 20627251 3'utr H FlyBase G44217.1 AAACATTTCCTTGAAACAGACTGAACCTGAATTTTTTTAG 14 20627220 0.790730145 4 12 91 0.857142857 1.079181246 0.071428571 0 0 14 2 0 12 3R:20627212-20627251 7 H FBtr0083916|FBtr0083914|FBtr0083915|FBtr0083917 20626787|20626787|20626787|20626787 20627251|20628915|20627251|20628915 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 20627216 20627246 3'utr H FlyBase G33409.1 ATTTCCTTGAAACAGACTGAACCTGAATTTT 15 20627233 0.804078651 5 14 79 0.956521739 1.342422681 0.086956522 0.4 0.608695652 15 1 0 22 3R:20627216-20627246 7 14.5 705 FBgn0001169 717.03 17.48666667 26.88666667 0.020222306 0.829203202 0.539300769 9 -4 2.5 0.5 dme-bantam-3p 7mer-A1 GATCTCA 3R 20644139 20644145 + 3R_20644139_20644145_+ 0.802627809 0.748050439 0.775339124 0.03859205 Lrrk FBtr0334641|FBtr0334640|FBtr0112788 20644133|20644133|20644133 20644279|20644279|20644279 3R + 20644091 20644157 stop_codon Lrrk FlyBase G44228.1 ATCACATTCATTGCCTGCTGTGGCGCGCCAAGCACTGGACCTAAATTCGATCTCATTCAAAATATTT 52 20644136 0.698673896 10 50 359 0.966101695 1.755874856 0.084745763 0.115384615 0.220338983 52 2 0 57 3R:20644091-20644157 7 Lrrk FBtr0334641|FBtr0334640|FBtr0112788 20644133|20644133|20644133 20644279|20644279|20644279 GATCTCA 7mer-A1 dme-bantam-3p 3R + 20644093 20644170 stop_codon Lrrk FlyBase G33415.1 CACATTCATTGCCTGCTGTGGCGCGCCAAGCACTGGACCTAAATTCGATCTCATTCAAAATATTTGTTGACGTATTTA 45 20644136 0.981245242 7 44 317 0.984615385 1.806179974 0.015384615 0.355555556 0.553846154 45 1 0 64 3R:20644093-20644170 7 44.5 706 FBgn0038816 197.3233333 3.033333333 4.62 0.225518185 14.67032967 9.632034632 3 3 3 0.5 dme-miR-184-3p 8mer-A1 TCCGTCCA 3R 20757447 20757454 - 3R_20757447_20757454_- 0.417584606 0.362130269 0.389857437 0.039212112 CG31195 FBtr0302188 20757267 20758623 3R - 20757249 20757605 3'utr CG31195 FlyBase G52894.1 TGTCCGCTTTTGGTTTTGTTTCTGGAAGTCTTGCCCCCCTGAACATTCCGCAATTTATTTGTAGATCAGTACAAAGCAATGAGAAGAAATCGAATGTGTAAATTGTGCCTTAAACTGAATATTTGTAACACAACAGACTATATCAAAAACATCCGTCCAATGAGTAGTCTACTTTGTATTATGTATCTACATATCTGAATTAGTGATAAGTGCCTTGAGACAAAATCGAATAACTTTTACAACCTGCTTGAGTAGTCTAATGTCTAGAATTTAAGTGTCTTATAATTTTAAAGCAATCCATCCATATATACAATGTTCAAATATATGATTTTGTAGTAAAAACCCCATTGACTTACC 206 20757445 0.981183262 56 192 1383 0.936170213 1.643452676 0.123404255 0.126213592 0.234042553 206 11 4 220 3R:20757249-20757605 8 CG31195 FBtr0302188 20757267 20758623 TCCGTCCA 8mer-A1 dme-miR-184-3p 3R - 20757282 20757525 3'utr CG31195 FlyBase G39936.1 GAGAAGAAATCGAATGTGTAAATTGTGCCTTAAACTGAATATTTGTAACACAACAGACTATATCAAAAACATCCGTCCAATGAGTAGTCTACTTTGTATTATGTATCTACATATCTGAATTAGTGATAAGTGCCTTGAGACAAAATCGAATAACTTTTACAACCTGCTTGAGTAGTCTAATGTCTAGAATTTAAGTGTCTTATAATTTTAAAGCAATCCATCCATATATACAATGTTCAAATAT 161 20757445 0.978751233 42 146 1002 0.91025641 1.425289616 0.145299145 0.347826087 0.551282051 161 14 7 213 3R:20757282-20757525 8 67 707 FBgn0051195 435.6633333 13.05 19.87666667 0.153788476 5.134099617 3.370786517 -9 -9 -9 0.5 dme-miR-968-5p 7mer-A1 CTACTTA 3R 21051806 21051812 - 3R_21051806_21051812_- 0.325239873 0.428627255 0.376933564 0.073105932 Mvl FBtr0301478|FBtr0089521|FBtr0330046|FBtr0301477 21051560|21051381|21051381|21051381 21052187|21052187|21052058|21052187 3R - 21051788 21051883 3'utr Mvl FlyBase G52956.1 AGGACCTGGGATCAGTGTAACACAATAACTAAATTCTAATTGAAAAGCGTACCAAAAACGGTTCATAAACTCTACTTACTGAGAAGCGCGAAGAGA 15 21051808 0.952626043 7 15 62 1 1.255272505 0.166666667 0.2 0.333333333 15 0 0 18 3R:21051788-21051883 7 Mvl FBtr0330046|FBtr0301477|FBtr0089521|FBtr0301478 21051381|21051381|21051381|21051560 21052058|21052187|21052187|21052187 CTACTTA 7mer-A1 dme-miR-968-5p 3R - 21051770 21051849 3'utr Mvl FlyBase G39980.1 TCTAATTGAAAAGCGTACCAAAAACGGTTCATAAACTCTACTTACTGAGAAGCGCGAAGAGACAAAATAGAAAATCCATG 13 21051834 0.931637713 6 12 47 1 1.301029996 0.05 0.384615385 0.6 13 0 0 20 3R:21051770-21051849 7 6 708 FBgn0011672 484.1233333 17.95 27.56 0.012393536 0.334261838 0.217706821 -4 22 9 0.5 dme-miR-283-5p 8mer-A1 TGATATTA 3R 21054906 21054913 - 3R_21054906_21054913_- 0.337457245 0.509099748 0.423278497 0.121369576 Mvl FBtr0306350 21054646 21054959 3R - 21054857 21054933 5'utr Mvl FlyBase G52965.1 CACTCCCCCACACACCCTTGTGATATTAACACTAAATCACACGCTTAACACTACTAACACGTACCTAGTAGGGCTCT 10 21054916 0.964914364 4 9 53 0.9 0.954242509 0.1 0 0 10 1 0 9 3R:21054857-21054933 8 Mvl FBtr0306350 21054646 21054959 TGATATTA 8mer-A1 dme-miR-283-5p 3R - 21054904 21054935 5'utr Mvl FlyBase G39986.1 CACACTCCCCCACACACCCTTGTGATATTAAC 5 21054916 0.834775427 2 5 29 1 0.84509804 0 0.4 0.571428571 5 0 0 7 3R:21054904-21054935 8 4.5 709 FBgn0011672 484.1233333 17.95 27.56 0.009295152 0.250696379 0.163280116 3 3 3 0.5 dme-miR-92b-3p 8mer-A1 GTGCAATA 3R 21070529 21070536 + 3R_21070529_21070536_+ 0.613035836 0.627835979 0.620435907 0.010465322 AnxB9 FBtr0089517 21070330 21070539 3R + 21070499 21070552 3'utr-intron AnxB9 FlyBase G44364.1 AATCTACAAAACGCTTAGTATTTTCCCTCTGTGCAATAACGTCTAACGTTCAAC 58 21070522 0.966970556 9 55 499 0.974683544 1.58546073 0.17721519 0.293103448 0.481012658 58 1 1 77 3R:21070499-21070552 8 AnxB9 FBtr0089517 21070330 21070539 GTGCAATA 8mer-A1 dme-miR-92b-3p 3R + 21070508 21070550 3'utr-intron AnxB9 FlyBase G33526.1 AACGCTTAGTATTTTCCCTCTGTGCAATAACGTCTAACGTTCA 46 21070534 0.836817315 7 43 425 0.9375 1.77815125 0.234375 0.326086957 0.515625 46 4 0 60 3R:21070508-21070550 8 47.5 710 FBgn0000083 3186.973333 280.66 427.6933333 0.014904423 0.169243925 0.111060885 7 -5 1 0.5 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3R 21110770 21110776 + 3R_21110770_21110776_+ 0.560620699 0.613820498 0.587220599 0.037617939 rtet FBtr0084009|FBtr0084009 21110706|21110706 21110834|21110834 3R + 21110728 21110804 3'utr rtet FlyBase G44381.1 TTAAACTCACTAGAGATCAACGGAAGTATTAGCTGCACATTATACTTAATTTATCGTTTTTTACAAGTATTTTATAT 21 21110767 0.990413708 7 19 195 0.923076923 1.079181246 0.153846154 0.19047619 0.346153846 21 1 1 24 3R:21110728-21110804 7 rtet FBtr0084009|FBtr0084009 21110706|21110706 21110834|21110834 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3R + 21110729 21110802 3'utr rtet FlyBase G33536.1 TAAACTCACTAGAGATCAACGGAAGTATTAGCTGCACATTATACTTAATTTATCGTTTTTTACAAGTATTTTAT 23 21110767 0.981726444 10 22 193 0.944444444 1.531478917 0.083333333 0.391304348 0.611111111 23 2 0 34 3R:21110729-21110802 7 13.5 711 FBgn0028468 207.3333333 14.48 21.91 0.06511254 0.932320442 0.616157006 3 3 3 0.5 dme-miR-1008-3p 6mer3-8 AGCTGT 3R 21115801 21115806 + 3R_21115801_21115806_+ 0.830280038 0.897847193 0.864063616 0.047777225 Rab11 FBtr0084011|FBtr0084010 21115383|21115383 21116146|21116146 3R + 21115769 21115813 3'utr Rab11 FlyBase G44388.1 CAAGCAAAACTAAACACTCCAAATTCAGTTTAAGCTGTAGAACTA 8 21115793 0.884779434 6 8 46 1 1 0.2 0.25 0.4 8 0 0 10 3R:21115769-21115813 6 Rab11 FBtr0084010|FBtr0084011 21115383|21115383 21116146|21116146 AGCTGT 6mer3-8 dme-miR-1008-3p 3R + 21115723 21115814 3'utr Rab11 FlyBase G33546.1 TACAGATCCATGAGTATCGCATAAATCGACCGCCGCGGAAAGAAAGCAAGCAAAACTAAACACTCCAAATTCAGTTTAAGCTGTAGAACTAT 8 21115791 0.987906754 5 6 49 0.777777778 0.84509804 0 0.125 0.222222222 8 2 0 7 3R:21115723-21115814 6 5 712 FBgn0015790 5922.233333 446.8466667 689.1166667 0.000844276 0.011189521 0.007255665 8 10 9 0.5 dme-miR-308-3p 7mer-m1 TGTGATT 3R 21116121 21116127 + 3R_21116121_21116127_+ 0.507367264 0.511996818 0.509682041 0.003273551 Rab11 FBtr0084011|FBtr0084010 21115383|21115383 21116146|21116146 3R + 21116088 21116146 3'utr Rab11 FlyBase G44391.1 CGAAATAACATCATTTGTGTTTGCTATGTTAAGTGTGATTAAATAAATATAATTTAAAT 13 21116128 0.904332942 8 11 119 0.8 1.079181246 0 0.153846154 0.266666667 13 3 0 12 3R:21116088-21116146 7 Rab11 FBtr0084010|FBtr0084011 21115383|21115383 21116146|21116146 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 21116092 21116131 3'utr Rab11 FlyBase G33548.1 ATAACATCATTTGTGTTTGCTATGTTAAGTGTGATTAAAT 6 21116129 0.989468937 5 5 48 0.818181818 0.954242509 0.181818182 0.666666667 0.818181818 6 2 0 9 3R:21116092-21116131 7 9 713 FBgn0015790 5922.233333 446.8466667 689.1166667 0.001519697 0.020141137 0.013060198 -7 -8 -7.5 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 21159358 21159363 - 3R_21159358_21159363_- 0.725322966 0.713829842 0.719576404 0.00812692 CG10824 FBtr0084028|FBtr0084028|FBtr0084028 21159236|21159236|21159236 21159389|21159389|21159389 3R - 21159320 21159375 3'utr CG10824 FlyBase G53041.1 GCCCATTTTTTATGTGATCACTACATTTTCAAAGCTTTACAATTATATGTATACAT 32 21159366 0.978663783 9 23 301 0.785714286 0.740362689 0.119047619 0.1875 0.380952381 32 4 5 33 3R:21159320-21159375 6 CG10824 FBtr0084028|FBtr0084028|FBtr0084028 21159236|21159236|21159236 21159389|21159389|21159389 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 21159332 21159375 3'utr CG10824 FlyBase G40046.1 GCCCATTTTTTATGTGATCACTACATTTTCAAAGCTTTACAATT 31 21159366 0.587900496 11 26 280 0.818181818 0.711204461 0.090909091 0.322580645 0.522727273 31 2 6 36 3R:21159332-21159375 6 28.5 714 FBgn0038865 99.77666667 6.58 10.09 0.285637925 4.331306991 2.824578791 3 3 3 0.5 dme-miR-1002-5p 7mer-m8 CTACTTA 3R 21266397 21266403 - 3R_21266397_21266403_- 0.456158614 0.335075283 0.395616949 0.085618823 Rab1 FBtr0084104 21266027 21266947 3R - 21266385 21266466 3'utr Rab1 FlyBase G53065.1 TAACTACACATTAATTGAGCGCAGGCGACGGCAGGAGCAATTGTACTTGTCCTGTGTCAGCTACTACTTACCACTATGTATA 21 21266399 0.965452715 7 21 127 1 1.361727836 0.347826087 0.095238095 0.173913043 21 0 0 23 3R:21266385-21266466 7 Rab1 FBtr0084104 21266027 21266947 CTACTTA 7mer-m8 dme-miR-1002-5p 3R - 21266372 21266454 3'utr Rab1 FlyBase G40068.1 AATTGAGCGCAGGCGACGGCAGGAGCAATTGTACTTGTCCTGTGTCAGCTACTACTTACCACTATGTATACATATGTATGTGT 11 21266399 0.963019567 7 10 58 0.928571429 0.812913357 0.428571429 0.181818182 0.357142857 11 0 1 13 3R:21266372-21266454 7 8 715 FBgn0016700 3065.546667 206.5566667 315.7 0.002609649 0.038730292 0.025340513 -4 -4 -4 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 21271338 21271343 - 3R_21271338_21271343_- 0.728530912 0.564456739 0.646493825 0.116017979 CG3308 FBtr0084102|FBtr0084102|FBtr0084102 21271076|21271076|21271076 21271954|21271954|21271954 3R - 21271323 21271391 3'utr CG3308 FlyBase G53081.1 TTCTTGTTGCGACGATGACGATGATGATGATGATTATGGGAAACGTAATGTGATCATTTTAAAAGCTAA 36 21271345 0.704356967 14 34 253 0.953488372 1.311753861 0.558139535 0.138888889 0.279069767 36 1 1 41 3R:21271323-21271391 6 CG3308 FBtr0084102|FBtr0084102|FBtr0084102 21271076|21271076|21271076 21271954|21271954|21271954 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 21271317 21271443 3'utr CG3308 FlyBase G40081.1 ACTTTTAGTTTGTGTCTCTGTTAGCCTGTAGTCGTACTTTTGTACATATTTATTCTTGTTGCGACGATGACGATGATGATGATGATTATGGGAAACGTAATGTGATCATTTTAAAAGCTAATTAGTT 37 21271335 0.988787621 16 34 342 0.903225806 1.748188027 0.483870968 0.486486486 0.693548387 37 6 0 56 3R:21271317-21271443 6 22 716 FBgn0038877 892.1133333 50.83666667 77.60666667 0.024660544 0.432758508 0.283480801 2 -8 -3 0.5 dme-miR-14-3p 7mer-A1 AGACTGA 3R 21361925 21361931 + 3R_21361925_21361931_+ 0.471893533 0.530380045 0.501136789 0.041356201 pre-mod(mdg4)-Z FBtr0303402 21361829 21362131 3R + 21361905 21361993 3'utr pre-mod(mdg4)-Z FlyBase G44530.1 TGAGCGTATATCATTGATTTAGACTGAGTGTCCCGAGCCTAGTTAGGATGGGTAAGTAGCCTGTTCATCTGGGATCTCAAAGTACCATT 96 21361923 0.888712736 17 88 710 0.923076923 1.73239376 0.247863248 0.166666667 0.316239316 96 8 1 108 3R:21361905-21361993 7 pre-mod(mdg4)-Z FBtr0303402 21361829 21362131 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 21361902 21361987 3'utr pre-mod(mdg4)-Z FlyBase G33640.1 TCTTGAGCGTATATCATTGATTTAGACTGAGTGTCCCGAGCCTAGTTAGGATGGGTAAGTAGCCTGTTCATCTGGGATCTCAAAGT 65 21361923 0.791859326 10 62 475 0.927083333 1.347330015 0.364583333 0.323076923 0.541666667 65 4 3 89 3R:21361902-21361987 7 65.5 717 FBgn0261838 149.3333333 9.943333333 15.14333333 0.438616071 6.587328193 4.325335681 2 2 2 0.5 dme-miR-14-3p 8mer-A1 AAGACTGA 3R 21570787 21570794 - 3R_21570787_21570794_- 0.36806482 0.40973321 0.388899015 0.029464008 InR FBtr0084121|FBtr0290232|FBtr0290230|FBtr0290231 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 3R - 21570714 21570921 3'utr InR FlyBase G53139.2 ATTAATTTAACAATGTAATACGCTATATGCATAACGAAACAATAGATATTCTACACAAACACACATGCACACAGACACCCACACACCCATACACACATTTACATATATTACACACATACACACTAAAAAGACTGAAAGATATAGTTCCTTTTGTTTTTATGTACATAAAAAAATGTGAAAAGAAAAAAGAGAAATTCTAACGAAAATC 303 21570805 0.999945463 24 268 1646 0.883333333 1.461034435 0.111111111 0.138613861 0.275 303 32 10 318 3R:21570714-21570921 8 InR FBtr0290230|FBtr0290231|FBtr0084121|FBtr0290232 21570246|21570246|21570246|21570246 21573390|21573390|21573390|21573390 AAGACTGA 8mer-A1 dme-miR-14-3p 3R - 21570728 21570817 3'utr InR FlyBase G40139.1 ATATTACACACATACACACTAAAAAGACTGAAAGATATAGTTCCTTTTGTTTTTATGTACATAAAAAAATGTGAAAAGAAAAAAGAGAAA 239 21570772 0.975740556 16 211 1338 0.872881356 1.410777233 0.076271186 0.372384937 0.576271186 239 34 11 309 3R:21570728-21570817 8 244 718 FBgn0013984 3333.303333 37.67666667 58.15666667 0.073200659 6.476156773 4.195563707 11 -22 -5.5 0.5 dme-miR-965-3p 7mer-A1 ACGCTTA 3R 21786170 21786176 - 3R_21786170_21786176_- 0.778667266 0.810771922 0.794719594 0.02270138 CASK FBtr0084162|FBtr0112873|FBtr0301327|FBtr0301328|FBtr0084161|FBtr0330368|FBtr0112872 21785760|21785760|21783398|21785760|21785760|21785760|21785760 21786682|21786682|21786682|21786682|21786682|21786589|21786682 3R - 21786109 21786210 3'utr CASK FlyBase G53257.1 TGTTTTATTCAGCATTTAGTCAAAACAGCATTAAACGCTTATGTAAATCTTGCACTTGTTAGTGTCTAAGTTAAATGGAGTTAGACAAATCGAAACTGAAGC 37 21786153 0.987016403 15 35 297 0.955555556 1.633468456 0.111111111 0.216216216 0.355555556 37 2 0 43 3R:21786109-21786210 7 CASK FBtr0301328|FBtr0084161|FBtr0330368|FBtr0112872|FBtr0084162|FBtr0112873|FBtr0301327 21785760|21785760|21785760|21785760|21785760|21785760|21783398 21786682|21786682|21786589|21786682|21786682|21786682|21786682 ACGCTTA 7mer-A1 dme-miR-965-3p 3R - 21786125 21786226 3'utr CASK FlyBase G40239.1 ATTGTTTTGTTGTATTTGTTTTATTCAGCATTTAGTCAAAACAGCATTAAACGCTTATGTAAATCTTGCACTTGTTAGTGTCTAAGTTAAATGGAGTTAGAC 24 21786179 0.984813899 14 23 189 0.96875 1.491361694 0.0625 0.291666667 0.46875 24 1 0 31 3R:21786125-21786226 7 16 719 FBgn0013759 1781.206667 49.49333333 75.88666667 0.008982675 0.323275862 0.210840727 -23 3 -10 0.5 dme-miR-317-3p 6mer3-8 TGTGTT 3R 21786240 21786245 - 3R_21786240_21786245_- 0.459150298 0.567882202 0.51351625 0.076885064 CASK FBtr0084162|FBtr0112873|FBtr0301327|FBtr0301328|FBtr0084161|FBtr0330368|FBtr0112872 21785760|21785760|21783398|21785760|21785760|21785760|21785760 21786682|21786682|21786682|21786682|21786682|21786589|21786682 3R - 21786224 21786278 3'utr CASK FlyBase G53258.1 TTTAATCGATTGTATTTGCCATTCCATGCTCAATGTGTTATATTTTACGATTATT 9 21786245 0.891542328 5 8 82 1 1.146128036 0.357142857 0.333333333 0.571428571 9 0 0 14 3R:21786224-21786278 6 CASK FBtr0301328|FBtr0084161|FBtr0330368|FBtr0112872|FBtr0084162|FBtr0112873|FBtr0301327 21785760|21785760|21785760|21785760|21785760|21785760|21783398 21786682|21786682|21786589|21786682|21786682|21786682|21786682 TGTGTT 6mer3-8 dme-miR-317-3p 3R - 21786232 21786275 3'utr CASK FlyBase G40240.1 AATCGATTGTATTTGCCATTCCATGCTCAATGTGTTATATTTTA 14 21786245 0.723780237 4 13 136 0.875 1.322219295 0.125 0.571428571 0.75 14 3 0 21 3R:21786232-21786275 6 8.5 720 FBgn0013759 1781.206667 49.49333333 75.88666667 0.004772046 0.171740302 0.112009136 0 0 0 0.5 dme-bantam-3p 8mer-A1 TGATCTCA 3R 21851167 21851174 - 3R_21851167_21851174_- 0.544847975 0.505841835 0.525344905 0.027581549 glec FBtr0084157 21850692 21851709 3R - 21851137 21851363 3'utr glec FlyBase G53271.1 GATATCGGTCTTATAATGGAAATTATTAAGTTAATGGATATGTGCTAATGTTAGACAAGCGATCGACAGCGCCATGCATCCACTATATATAGACTAAACCCCAACCCAAACCAATTCAAGCGTTCTCAGCGTGTTTTCGGGTCCAGATGCACGCGTGTGCCAAAAGTATTTACAATTTACTTTGTGTCATGATCTCAATTATTAAAAACAATTTTATTATTTTGTTT 358 21851174 0.987084384 40 342 2981 0.971365639 2.042378598 0.167400881 0.198879552 0.370044053 357 10 3 441 3R:21851137-21851363 8 glec FBtr0084157 21850692 21851709 TGATCTCA 8mer-A1 dme-bantam-3p 3R - 21851154 21851329 3'utr glec FlyBase G40253.1 TGGATATGTGCTAATGTTAGACAAGCGATCGACAGCGCCATGCATCCACTATATATAGACTAAACCCCAACCCAAACCAATTCAAGCGTTCTCAGCGTGTTTTCGGGTCCAGATGCACGCGTGTGCCAAAAGTATTTACAATTTACTTTGTGTCATGATCTCAATTATTAAAAACA 230 21851174 0.897124119 29 221 1929 0.962427746 2.045322979 0.161849711 0.382608696 0.589595376 230 11 2 333 3R:21851154-21851329 8 205.5 721 FBgn0015229 300 18.05666667 27.87 0.685 11.3808381 7.373519914 0 0 0 0.5 dme-miR-283-5p 8mer-A1 TGATATTA 3R 21851645 21851652 - 3R_21851645_21851652_- 0.560707878 0.589850066 0.575278972 0.020606647 glec FBtr0084157 21850692 21851709 3R - 21851623 21851696 3'utr glec FlyBase G53273.1 TGACGATGACAAATAGCCCCTGGCGGAGCAATAATTGCAATATATGATATTAATTGTAAATGTAATTTTAATTT 24 21851656 0.858994323 8 23 158 0.964285714 1.431363764 0.142857143 0.125 0.25 24 1 0 27 3R:21851623-21851696 8 glec FBtr0084157 21850692 21851709 TGATATTA 8mer-A1 dme-miR-283-5p 3R - 21851624 21851696 3'utr glec FlyBase G40256.1 TGACGATGACAAATAGCCCCTGGCGGAGCAATAATTGCAATATATGATATTAATTGTAAATGTAATTTTAATT 18 21851664 0.931655859 10 18 110 1 1.51851394 0.121212121 0.555555556 0.757575758 18 0 0 33 3R:21851624-21851696 8 9 722 FBgn0015229 300 18.05666667 27.87 0.03 0.498430866 0.322927879 4 12 8 0.5 dme-miR-305-5p 7mer-A1 GTACAAA 3R 23049704 23049710 - 3R_23049704_23049710_- 0.681083106 0.766977038 0.724030072 0.060736159 p53 FBtr0345262|FBtr0084360|FBtr0301765|FBtr0084359 23049655|23049655|23049655|23049655 23049964|23049964|23049964|23049964 3R - 23049682 23049726 3'utr p53 FlyBase G53557.1 ACAACAAACATACTCTGTACAAAAAAGCCAAAAGTGAATTTATTA 11 23049712 0.724762631 4 11 37 1 1.041392685 0 0 0 11 0 0 11 3R:23049682-23049726 7 p53 FBtr0301765|FBtr0084359|FBtr0345262|FBtr0084360 23049655|23049655|23049655|23049655 23049964|23049964|23049964|23049964 GTACAAA 7mer-A1 dme-miR-305-5p 3R - 23049664 23049726 3'utr p53 FlyBase G40468.1 ACAACAAACATACTCTGTACAAAAAAGCCAAAAGTGAATTTATTAAAGAGTTGTCATATTTTG 8 23049712 0.936389874 6 8 31 1 1.041392685 0.181818182 0.25 0.454545455 8 0 0 11 3R:23049664-23049726 7 7.5 723 FBgn0039044 93.11333333 6.436666667 9.84 0.080547004 1.165199379 0.762195122 2 2 2 0.5 dme-miR-14-3p 6mer3-8 AAGACT 3R 23114369 23114374 - 3R_23114369_23114374_- 0.595119252 0.851129515 0.723124384 0.181026548 Rassf FBtr0084407 23114012 23114672 3R - 23114347 23114394 3'utr Rassf FlyBase G53574.1 CATTCGTTTAGAAAGCGTTTAAGACTTGTAACTAACCAAAAAATAATT 14 23114376 0.980246234 4 13 96 0.947368421 1.255272505 0.157894737 0.214285714 0.421052632 14 1 0 18 3R:23114347-23114394 6 Rassf FBtr0084407 23114012 23114672 AAGACT 6mer3-8 dme-miR-14-3p 3R - 23114323 23114409 3'utr Rassf FlyBase G40479.1 AATTCCAGGCATTTCCATTCGTTTAGAAAGCGTTTAAGACTTGTAACTAACCAAAAAATAATTATTAATCCACAACATTACCATACA 19 23114376 0.98397587 8 18 138 0.964285714 1.130333768 0.178571429 0.421052632 0.607142857 19 0 1 27 3R:23114323-23114409 6 15 724 FBgn0039055 618.9666667 21.53666667 33.01666667 0.024233938 0.696486612 0.454316002 2 2 2 0.5 dme-miR-308-3p 7mer-m1 TGTGATT 3R 23151617 23151623 - 3R_23151617_23151623_- 0.386755939 0.339134337 0.362945138 0.033673556 unk FBtr0084402|FBtr0305573|FBtr0337052 23151562|23150239|23149651 23153939|23153939|23153939 3R - 23151574 23151647 3'utr unk FlyBase G53602.1 ACGCTACTGTAAGAGTGATTTTTATGTGATTTTGAAACTACTTGAATATGTGATCCAGAAATATATAAAAAACA 18 23151628 0.971416864 8 18 158 1 1.342422681 0.363636364 0.222222222 0.363636364 18 0 0 22 3R:23151574-23151647 7 unk FBtr0305573|FBtr0337052|FBtr0084402 23150239|23149651|23151562 23153939|23153939|23153939 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 23151611 23151647 3'utr unk FlyBase G40506.1 ACGCTACTGTAAGAGTGATTTTTATGTGATTTTGAAA 16 23151616 0.775366016 7 14 167 0.896551724 1.113943352 0.275862069 0.625 0.793103448 16 2 1 26 3R:23151611-23151647 7 9 725 FBgn0004395 913.0833333 29.83666667 45.42666667 0.009856713 0.301642275 0.198121515 5 -7 -1 0.5 "dme-miR-996-3p,dme-miR-279-3p" 6mer3-8 TCTAGT 3R 23255452 23255457 - 3R_23255452_23255457_- 0.517641963 0.861266942 0.689454452 0.242979497 wda FBtr0084387 23255068 23255493 3R - 23255434 23255480 3'utr wda FlyBase G53644.1 AAGTTCAGCCCGAATTTAGACTTTCTAGTGACGACTTATGTTTGAAA 34 23255464 0.691882377 9 33 263 0.951219512 1.113943352 0.195121951 0.205882353 0.341463415 34 0 2 39 3R:23255434-23255480 6 wda FBtr0084387 23255068 23255493 TCTAGT 6mer3-8 "dme-miR-996-3p,dme-miR-279-3p" 3R - 23255426 23255479 3'utr wda FlyBase G40547.1 AGTTCAGCCCGAATTTAGACTTTCTAGTGACGACTTATGTTTGAAAATAATTTA 18 23255459 0.965605775 6 17 141 0.954545455 1.021189299 0.045454545 0.222222222 0.363636364 18 0 1 21 3R:23255426-23255479 6 26 726 FBgn0039067 161 7.11 10.86333333 0.161490683 3.656821378 2.3933722 7 2 4.5 0.5 dme-miR-318-3p 8mer-A1 CCCAGTGA 3R 23712878 23712885 - 3R_23712878_23712885_- 0.599424106 0.562576483 0.581000295 0.026055188 nau FBtr0301445|FBtr0084472 23712812|23712812 23712945|23712945 3R - 23712822 23712919 3'utr nau FlyBase G53743.1 TTGTAAAGCTATTTTTAAGAGGATACACGAGATACCCAGTGACCCGAATAGGCCTTAAATTATTTGTATAGCATTAGAACTTAATTAAATGGTAATTC 48 23712880 0.948735073 10 48 213 1 1.73239376 0.37037037 0.083333333 0.185185185 48 0 0 54 3R:23712822-23712919 8 nau FBtr0301445|FBtr0084472 23712812|23712812 23712945|23712945 CCCAGTGA 8mer-A1 dme-miR-318-3p 3R - 23712859 23712903 3'utr nau FlyBase G40621.1 AAGAGGATACACGAGATACCCAGTGACCCGAATAGGCCTTAAATT 30 23712880 0.958694621 3 30 94 1 1.62324929 0.547619048 0.333333333 0.523809524 30 0 0 42 3R:23712859-23712903 8 35 727 FBgn0002922 0 0 0 Inf Inf Inf -5 -5 -5 0.5 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA 3R 23809228 23809234 - 3R_23809228_23809234_- 0.668994178 0.65758976 0.663291969 0.008064129 eIF4G2 FBtr0344335 23808283 23810293 3R - 23809202 23809282 5'utr eIF4G2 FlyBase G53863.1 AAAATTCGTAAAGACATGTAAAGTATTTAGCACACAAAGCATGATTATCCAAAGATAAATCTTAAAATTAGCTGTAAAAAG 47 23809238 0.694930987 13 42 273 0.890909091 1.69019608 0.036363636 0.14893617 0.272727273 47 6 0 49 3R:23809202-23809282 7 eIF4G2 FBtr0344335 23808283 23810293 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 23809207 23809270 5'utr eIF4G2 FlyBase G40707.1 GACATGTAAAGTATTTAGCACACAAAGCATGATTATCCAAAGATAAATCTTAAAATTAGCTGTA 23 23809238 0.982911985 8 18 143 0.84375 1.431363764 0.03125 0.304347826 0.5 23 5 0 27 3R:23809207-23809270 7 26 728 FBgn0260634 1847.216667 30.65 47.06666667 0.01407523 0.848287113 0.552407932 4 4 4 0.5 dme-miR-305-5p 8mer-A1 AGTACAAA 3R 23809542 23809549 - 3R_23809542_23809549_- 0.516100275 0.517533359 0.516816817 0.001013355 eIF4G2 FBtr0344335 23808283 23810293 3R - 23809465 23809594 5'utr eIF4G2 FlyBase G53865.1 ATACTTTTCTAGACTTTAAACAGAATTTTGTTTATTTTACCTTTCAGTACAAAGCATTATGAACTTCGTTTTGTTTGATTTTTTATAAAGAACTACCAACATTGATTTACCTATTTTCTATGCGAATGGC 83 23809551 0.987385384 12 80 715 0.970588235 1.694605199 0.029411765 0.192771084 0.343137255 83 2 1 99 3R:23809465-23809594 8 eIF4G2 FBtr0344335 23808283 23810293 AGTACAAA 8mer-A1 dme-miR-305-5p 3R - 23809518 23809592 5'utr eIF4G2 FlyBase G40709.1 ACTTTTCTAGACTTTAAACAGAATTTTGTTTATTTTACCTTTCAGTACAAAGCATTATGAACTTCGTTTTGTTTG 44 23809552 0.988108518 8 40 370 0.918032787 1.447158031 0.016393443 0.295454545 0.491803279 44 4 1 56 3R:23809518-23809592 8 57.5 729 FBgn0260634 1847.216667 30.65 47.06666667 0.031127913 1.876019576 1.221671388 2 3 2.5 0.5 dme-miR-308-3p 7mer-m1 TGTGATT 3R 23995213 23995219 + 3R_23995213_23995219_+ 0.517319259 0.507759335 0.512539297 0.006759941 Rab7 FBtr0308612|FBtr0084503|FBtr0308611 23994749|23994749|23994749 23995252|23995452|23995252 3R + 23995150 23995241 3'utr Rab7 FlyBase G45117.1 TGCAACAGAACAGCAACATTGAGAATACAACATCAGAGTATCTTCTAAACAAACAAAAAATCTTGTGATTGTAAATTTAATAAAAGAATAAC 337 23995212 0.988788597 12 310 2912 0.923273657 1.235287907 0.046035806 0.139465875 0.25831202 337 10 20 361 3R:23995150-23995241 7 Rab7 FBtr0308612|FBtr0084503|FBtr0308611 23994749|23994749|23994749 23995252|23995452|23995252 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 23995178 23995245 3'utr Rab7 FlyBase G34078.1 AACATCAGAGTATCTTCTAAACAAACAAAAAATCTTGTGATTGTAAATTTAATAAAAGAATAACTTTT 241 23995219 0.637495373 10 223 2106 0.928571429 1.348026558 0.041666667 0.290456432 0.491071429 241 11 13 312 3R:23995178-23995245 7 281 730 FBgn0015795 908.47 85 130.1166667 0.30931126 3.305882353 2.159600359 1 -6 -2.5 0.5 dme-miR-184-5p 7mer-m8 TGATAAG 3R 24034590 24034596 - 3R_24034590_24034596_- 0.417577179 0.628748014 0.523162596 0.149320305 Miro FBtr0084596|FBtr0084595|FBtr0303849|FBtr0321262 24034360|24034360|24034360|24034360 24034893|24034893|24034893|24034893 3R - 24034590 24034657 3'utr Miro FlyBase G54009.1 GAGCACATTGTGTACGCTGCATTTCTAATCGTATATTAACTTACATAAACCATGTTCTCTCTGATAAG 24 24034605 0.75765264 9 21 172 0.90625 1.462397998 0.125 0.291666667 0.46875 24 3 0 29 3R:24034590-24034657 6 Miro FBtr0084596|FBtr0084595|FBtr0303849|FBtr0321262 24034360|24034360|24034360|24034360 24034893|24034893|24034893|24034893 TGATAAG 7mer-m8 dme-miR-184-5p 3R - 24034556 24034687 3'utr Miro FlyBase G40799.1 GCAGGAATTGGGCTGGAGCAGTGGCCAGTCGAGCACATTGTGTACGCTGCATTTCTAATCGTATATTAACTTACATAAACCATGTTCTCTCTGATAAGTCAAATAAGCTATTGTTACCAGCATATTCGAGTA 14 24034598 0.987621698 9 14 114 1 1.361727836 0.043478261 0.357142857 0.608695652 14 0 0 23 3R:24034556-24034687 7 11.5 731 FBgn0039140 543 24.22 36.88333333 0.021178637 0.474814203 0.311793945 9 2 5.5 0.5 dme-miR-276a-3p 7mer-m8 AGTTCCT 3R 24042327 24042333 + 3R_24042327_24042333_+ 0.630831705 0.510515845 0.570673775 0.085076189 spas FBtr0084533|FBtr0321260|FBtr0346099 24041623|24041623|24041623 24042654|24042386|24042982 3R + 24042274 24042339 3'utr spas FlyBase G45134.1 GAATCGTATTTAAGTTTTAATAGTTATCACTGTCCGTATGGTTAGTCTAGTTTAGTTCCTTTGTTT 7 24042297 0.995170563 7 7 96 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3R:24042274-24042339 7 spas FBtr0084533|FBtr0321260|FBtr0346099 24041623|24041623|24041623 24042654|24042386|24042982 AGTTCCT 7mer-m8 dme-miR-276a-3p 3R + 24042285 24042330 3'utr spas FlyBase G34091.1 AAGTTTTAATAGTTATCACTGTCCGTATGGTTAGTCTAGTTTAGTT 14 24042310 0.6483564 6 9 129 0.714285714 0.875061263 0.19047619 0.428571429 0.619047619 14 5 1 15 3R:24042285-24042330 4 4.5 732 FBgn0039141 308.9966667 10.26 15.68 0.014563264 0.438596491 0.286989796 30 17 23.5 0.5 dme-bantam-3p 8mer-A1 TGATCTCA 3R 24055167 24055174 - 3R_24055167_24055174_- 0.372839143 0.362351645 0.367595394 0.007415782 Hsp68 FBtr0084589 24055078 24055196 3R - 24055146 24055243 stop_codon Hsp68 FlyBase G54050.1 AGCAAGCTGGCGGTTATAAGGGTCCCACCGTCGAGGAGGTGGACTAATTCAAACGAAGTCCCCCTATATTGATCTCATAACCAAAAATACTCAAATAT 1368 24055175 0.876142772 14 1328 9596 0.971669681 1.952092532 0.177817963 0.159356725 0.306811332 1368 30 17 1612 3R:24055146-24055243 8 Hsp68 FBtr0084589 24055078 24055196 TGATCTCA 8mer-A1 dme-bantam-3p 3R - 24055105 24055193 3'utr Hsp68 FlyBase G40829.1 AAACGAAGTCCCCCTATATTGATCTCATAACCAAAAATACTCAAATATCTAAAAATATAGTTCCAATATGCTATTAAATAGTATTAATA 663 24055175 0.678258466 13 636 4675 0.962151394 1.984977126 0.156374502 0.34841629 0.569721116 663 29 9 966 3R:24055105-24055193 8 1005 733 FBgn0001230 388.3333333 20.75333333 31.29666667 2.587982833 48.42595567 32.11204601 1 1 1 0.5 dme-miR-11-3p 7mer-m1 TGTGATG 3R 24067400 24067406 - 3R_24067400_24067406_- 0.534908321 0.532855125 0.533881723 0.001451832 4EHP FBtr0300475|FBtr0303159 24067364|24064475 24101797|24068001 3R - 24067385 24067426 3'utr 4EHP FlyBase G54063.1 TTAATTAGTAATTATTATAATGTGATGTTATATATATAAATC 35 24067410 0.651195498 9 33 393 0.973684211 1.568201724 0.052631579 0.085714286 0.157894737 35 1 0 37 3R:24067385-24067426 7 4EHP FBtr0300475|FBtr0303159 24067364|24064475 24101797|24068001 TGTGATG 7mer-m1 dme-miR-11-3p 3R - 24067384 24067426 3'utr 4EHP FlyBase G40836.1 TTAATTAGTAATTATTATAATGTGATGTTATATATATAAATCA 34 24067399 0.652942345 7 31 396 0.913043478 1.62324929 0 0.294117647 0.47826087 34 4 0 42 3R:24067384-24067426 7 34 734 FBgn0053100 1050.1 50.24 77.18 0.032377869 0.676751592 0.440528634 4 -7 -1.5 0.5 dme-miR-970-3p 8mer-A1 TCTTATGA 3R 24248707 24248714 + 3R_24248707_24248714_+ 0.59340027 0.536493998 0.564947134 0.040238831 mask FBtr0345261|FBtr0084562|FBtr0334942|FBtr0305043|FBtr0334943|FBtr0084563 24248013|24248013|24248013|24248013|24248013|24248013 24250248|24250248|24250248|24250248|24250248|24248853 3R + 24248650 24248724 3'utr mask FlyBase G45302.1 ACACAAACCCACACACCCGCATATACACAAATACATTTACGTTAGGATAAAAGTCAGTCTTATGAATGAAACATT 21 24248707 0.972439039 9 20 120 0.916666667 1.342422681 0.125 0.142857143 0.25 21 2 0 22 3R:24248650-24248724 8 mask FBtr0334942|FBtr0305043|FBtr0334943|FBtr0084563|FBtr0345261|FBtr0084562 24248013|24248013|24248013|24248013|24248013|24248013 24250248|24250248|24250248|24248853|24250248|24250248 TCTTATGA 8mer-A1 dme-miR-970-3p 3R + 24248660 24248754 3'utr mask FlyBase G34197.1 ACACACCCGCATATACACAAATACATTTACGTTAGGATAAAAGTCAGTCTTATGAATGAAACATTAAATTGAAATGTTTAGCGCCAGCTAAAGTT 17 24248714 0.981160097 8 15 110 0.913043478 1.322219295 0.043478261 0.235294118 0.434782609 17 2 0 21 3R:24248660-24248754 8 11 735 FBgn0043884 5250.546667 44.06333333 67.82333333 0.00209502 0.249640669 0.162186072 0 -7 -3.5 0.5 dme-miR-14-3p 8mer-A1 AAGACTGA 3R 24344645 24344652 - 3R_24344645_24344652_- 0.57845772 0.436713538 0.507585629 0.100228285 CG5746 FBtr0334603 24343893 24346710 3R - 24344606 24344746 3'utr CG5746 FlyBase G54200.1 ATGTATACAATGATTTTATTTGTTATTATTAAGCCGAACCTAAACTACAGTCTTAAAAAGTATAAACAAGATATGCAAATGAAAATTTATTAAAAAGACTGATACTTCACGAGATACAATCTCCATAGATCCAAAGAAACT 58 24344658 0.980591959 18 53 375 0.897058824 1.30820858 0.044117647 0.155172414 0.279411765 58 5 2 61 3R:24344606-24344746 8 CG5746 FBtr0334603 24343893 24346710 AAGACTGA 8mer-A1 dme-miR-14-3p 3R - 24344598 24344745 3'utr CG5746 FlyBase G40927.1 TGTATACAATGATTTTATTTGTTATTATTAAGCCGAACCTAAACTACAGTCTTAAAAAGTATAAACAAGATATGCAAATGAAAATTTATTAAAAAGACTGATACTTCACGAGATACAATCTCCATAGATCCAAAGAAACTAAATATAA 43 24344658 0.988572706 18 36 313 0.84375 1.033423755 0.109375 0.279069767 0.515625 43 6 4 54 3R:24344598-24344745 8 34.5 736 FBgn0039186 880.5666667 39.34 60.32 0.039179316 0.876970005 0.571949602 6 6 6 0.5 dme-miR-305-5p 8mer-A1 AGTACAAA 3R 24345262 24345269 - 3R_24345262_24345269_- 0.309743601 0.481800242 0.395771921 0.121662389 CG5746 FBtr0334603 24343893 24346710 3R - 24345256 24345328 3'utr CG5746 FlyBase G54203.1 CACGTACCATAACAATTCAATTAGATAAATATCTAAAATTACAAACTGAAAGCACTGAAAGTACAAAATGAAA 31 24345260 0.952942615 6 23 106 0.736842105 0.970036777 0.105263158 0.193548387 0.342105263 31 8 2 28 3R:24345256-24345328 8 CG5746 FBtr0334603 24343893 24346710 AGTACAAA 8mer-A1 dme-miR-305-5p 3R - 24345249 24345308 3'utr CG5746 FlyBase G40930.1 TTAGATAAATATCTAAAATTACAAACTGAAAGCACTGAAAGTACAAAATGAAAATATAAA 27 24345267 0.698878618 7 21 91 0.813953488 0.84509804 0.023255814 0.444444444 0.651162791 27 4 4 35 3R:24345249-24345308 8 24 737 FBgn0039186 880.5666667 39.34 60.32 0.027255177 0.61006609 0.397877984 -9 -2 -5.5 0.5 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-m8 ACCAAAG 3R 24346235 24346241 - 3R_24346235_24346241_- 0.578107511 0.635793006 0.606950259 0.040789808 CG5746 FBtr0334603|FBtr0334602|FBtr0273282|FBtr0084631|FBtr0084630|FBtr0334601|FBtr0273283 24343893|24345790|24345790|24345790|24345790|24345790|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 3R - 24346228 24346333 3'utr CG5746 FlyBase G54208.1 TAGACAAACGGAGCTAGACTGCACTGAGCTCCAGCCTAAGAAAATTAAATGTGCTCCTCCTTAGTTCCATTTACAATTACAAGTCAACTGTGACCAAAGTATGCTA 25 24346264 0.972417503 15 23 144 0.935483871 1.462397998 0.193548387 0.2 0.35483871 25 2 0 29 3R:24346228-24346333 7 CG5746 FBtr0273283|FBtr0084630|FBtr0334601|FBtr0273282|FBtr0084631|FBtr0334603|FBtr0334602 24345790|24345790|24345790|24345790|24345790|24343893|24345790 24346710|24346710|24346710|24346710|24346710|24346710|24346710 ACCAAAG 7mer-m8 "dme-miR-9b-5p,dme-miR-9c-5p" 3R - 24346226 24346289 3'utr CG5746 FlyBase G40935.1 TTAAATGTGCTCCTCCTTAGTTCCATTTACAATTACAAGTCAACTGTGACCAAAGTATGCTACA 15 24346245 0.725993815 10 15 102 1 1.342422681 0.136363636 0.4 0.590909091 15 0 0 22 3R:24346226-24346289 7 7.5 738 FBgn0039186 880.5666667 39.34 60.32 0.008517243 0.190645653 0.12433687 23 4 13.5 0.5 dme-miR-7-5p 6mer2-7 TCTTCC 3R 24355848 24355853 + 3R_24355848_24355853_+ 0.996403335 0.982500703 0.989452019 0.009830623 CG6454 FBtr0273323|FBtr0273324|FBtr0330373 24355777|24355777|24355801 24356241|24356241|24356241 3R + 24355821 24355869 3'utr CG6454 FlyBase G45385.1 CGTCCCAAAAGCGTATACTCTCTATTTTCTTCCGCTTAGCTAGAACTAT 7 24355847 0.714462663 5 6 64 1 0.903089987 0 0.142857143 0.25 7 0 0 8 3R:24355821-24355869 6 CG6454 FBtr0330373|FBtr0273323|FBtr0273324 24355801|24355777|24355777 24356241|24356241|24356241 TCTTCC 6mer2-7 dme-miR-7-5p 3R + 24355809 24355893 3'utr CG6454 FlyBase G34254.1 TTTTACGCGAATCGTCCCAAAAGCGTATACTCTCTATTTTCTTCCGCTTAGCTAGAACTATCAGCTCTGCCCAGCAACTGGAGTT 12 24355848 0.950465007 9 11 82 0.933333333 1.146128036 0.066666667 0.25 0.4 12 1 0 14 3R:24355809-24355893 6 4.5 739 FBgn0039187 605.7933333 16.75333333 25.68 0.007428276 0.268603263 0.175233645 1 0 0.5 0.5 dme-miR-34-5p 6mer2-7 ACTGCC 3R 24536690 24536695 - 3R_24536690_24536695_- 0.595601675 0.621049444 0.60832556 0.017994241 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 3R - 24536647 24536743 3'utr CG5789 FlyBase G54230.1 CATTTCCTTAGTTTAGTTAAGTTTGTTAACGAAAAGTCTAGAATGTGTACTGCCTTATACGTATTGTACTTAGATGTAATCTCCACCAGGGACTACG 76 24536689 0.64873482 15 67 595 0.88 1.643452676 0.08 0.263157895 0.44 76 11 1 88 3R:24536647-24536743 6 CG5789 FBtr0306025|FBtr0089906 24536202|24536202 24536918|24536918 ACTGCC 6mer2-7 dme-miR-34-5p 3R - 24536640 24536720 3'utr CG5789 FlyBase G40951.1 TGTTAACGAAAAGTCTAGAATGTGTACTGCCTTATACGTATTGTACTTAGATGTAATCTCCACCAGGGACTACGTTGTAAT 67 24536689 0.985773058 10 60 502 0.908045977 1.420505837 0.16091954 0.23880597 0.413793103 67 6 2 79 3R:24536640-24536720 6 54 740 FBgn0039207 633.5166667 14.68333333 22.4 0.085238484 3.677639047 2.410714286 -6 -6 -6 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 24558828 24558834 - 3R_24558828_24558834_- 0.654878591 0.641204909 0.64804175 0.009668766 CG13624 FBtr0084672|FBtr0084672|FBtr0084672 24557366|24557366|24557366 24560507|24560507|24560507 3R - 24558772 24558887 3'utr CG13624 FlyBase G54254.1 TTCTAATTTGCATTATCAAAATGAATACTTTTGCTCTGCTTCGATGCTAATTTTGTGATATTTGTATTCAAATTTTCTTTGTTGTGTAGTTCTTTGGGGCGGGATCCTCCTATTTT 179 24558836 0.99371934 18 168 2108 0.944954128 1.614897216 0.26146789 0.184357542 0.330275229 179 8 4 206 3R:24558772-24558887 7 CG13624 FBtr0084672|FBtr0084672|FBtr0084672 24557366|24557366|24557366 24560507|24560507|24560507 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 24558812 24558861 3'utr CG13624 FlyBase G40970.1 ACTTTTGCTCTGCTTCGATGCTAATTTTGTGATATTTGTATTCAAATTTT 126 24558836 0.715429481 11 113 1500 0.914893617 1.33243846 0.271276596 0.412698413 0.606382979 126 9 7 172 3R:24558812-24558861 7 147 741 FBgn0039209 1863.993333 50.61333333 77.60666667 0.078862943 2.904373024 1.894167168 2 2 2 0.5 dme-miR-307a-3p 6mer2-7 GTTGTG 3R 24760280 24760285 + 3R_24760280_24760285_+ 0.451702025 0.431058986 0.441380506 0.014596805 asp FBtr0084692 24760231 24760513 3R + 24760167 24760373 stop_codon asp FlyBase G45533.1 ACGTTTATCTCGTCCGTTTACGCCTTCGATACGATTTTGTGCAAGCTGCAGATCGACATGTTTTAGATTTAGGAAAATTCATCTTTAAATGTTTAATGTTAAAACCATTCTGTGTTGTGTTTTAAAATAGTCACATAAATTCTTAGACCATGCTAGTTTTTTGGAGACAATTAGAAATAGTTTAAGATAATCTAAGACCGTCTTAAC 88 24760275 0.831793272 25 81 906 0.923076923 1.982271233 0.153846154 0.159090909 0.288461538 88 8 0 96 3R:24760167-24760373 6 asp FBtr0084692 24760231 24760513 GTTGTG 6mer2-7 dme-miR-307a-3p 3R + 24760248 24760354 3'utr asp FlyBase G34349.1 TCTTTAAATGTTTAATGTTAAAACCATTCTGTGTTGTGTTTTAAAATAGTCACATAAATTCTTAGACCATGCTAGTTTTTTGGAGACAATTAGAAATAGTTTAAGAT 39 24760275 0.877326542 13 37 392 0.964912281 1.740362689 0.192982456 0.333333333 0.543859649 39 2 0 55 3R:24760248-24760354 6 44 742 FBgn0000140 1001.803333 19.02666667 29.17333333 0.043920796 2.312543798 1.508226691 5 5 5 0.5 dme-miR-282-5p 7mer-m8 AGAGGCT 3R 24770042 24770048 + 3R_24770042_24770048_+ 0.478514241 0.551756596 0.515135419 0.051790198 CG13631 FBtr0084693|FBtr0339253 24769772|24769772 24770111|24770933 3R + 24769968 24770108 3'utr CG13631 FlyBase G45540.1 GTTCCCAAGATTCCAATGGGTAATCCAAATAGTTCGATTCGTATGACCCGAATGGGTGATCCCCGGATCACGTTAGAGGCTTCAAAGTGTTGGCAGGGGACAGGGCAATCTGTGTAACGACATTCCTTCTCAACAATAACT 147 24770041 0.975419638 16 136 859 0.920903955 1.911157609 0.271186441 0.170068027 0.310734463 147 13 1 163 3R:24769968-24770108 7 CG13631 FBtr0339253|FBtr0084693 24769772|24769772 24770933|24770111 AGAGGCT 7mer-m8 dme-miR-282-5p 3R + 24769998 24770102 3'utr CG13631 FlyBase G34355.1 AGTTCGATTCGTATGACCCGAATGGGTGATCCCCGGATCACGTTAGAGGCTTCAAAGTGTTGGCAGGGGACAGGGCAATCTGTGTAACGACATTCCTTCTCAACA 105 24770041 0.936151021 13 93 551 0.873493976 2.161368002 0.313253012 0.419047619 0.63253012 105 21 0 145 3R:24769998-24770102 7 98.5 743 FBgn0040600 1409.473333 109.07 167.31 0.069884259 0.903089759 0.588727512 1 1 1 0.5 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 24805499 24805506 - 3R_24805499_24805506_- 0.355365995 0.372711452 0.364038723 0.012265121 CG5807 FBtr0331697 24805443 24805557 3R - 24805486 24805534 3'utr CG5807 FlyBase G54386.2 AATTTAAGGAAAACTACCTACGATATTGCTGTGATTCAATGACTTAATT 19 24805509 0.981679455 7 18 145 0.958333333 1.361727836 0.083333333 0.157894737 0.333333333 19 1 0 23 3R:24805486-24805534 8 CG5807 FBtr0331697 24805443 24805557 CTGTGATT 8mer-m1 dme-miR-308-3p 3R - 24805451 24805529 3'utr CG5807 FlyBase G41070.1 AAGGAAAACTACCTACGATATTGCTGTGATTCAATGACTTAATTAAAACTTTAAATGATGCTTTAGGGATGCTATAATA 22 24805508 0.771724634 10 22 195 1 1.556302501 0.222222222 0.363636364 0.611111111 22 0 0 36 3R:24805451-24805529 8 15.5 744 FBgn0027539 323.6833333 14.69666667 22.53666667 0.047886309 1.054660921 0.687768082 3 2 2.5 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 24805706 24805712 - 3R_24805706_24805712_- 0.658828533 0.681854382 0.670341458 0.01628177 CG5807 FBtr0084739|FBtr0084739|FBtr0084739 24805665|24805665|24805665 24806410|24806410|24806410 3R - 24805666 24805734 3'utr CG5807 FlyBase G54387.1 ACTAACAAGCGTCTAAAACTTATGTGATAAAAAATAATAATAAACAAAGCATTTTACTAAATTAATCGA 84 24805714 0.976377962 5 80 517 0.95959596 1.977723605 0.090909091 0.130952381 0.262626263 84 4 0 95 3R:24805666-24805734 7 CG5807 FBtr0084739|FBtr0084739|FBtr0084739 24805665|24805665|24805665 24806410|24806410|24806410 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 24805689 24805736 3'utr CG5807 FlyBase G41071.1 ACACTAACAAGCGTCTAAAACTTATGTGATAAAAAATAATAATAAACA 64 24805714 0.803519252 7 61 386 0.966666667 1.939519253 0.133333333 0.359375 0.544444444 64 3 0 87 3R:24805689-24805736 7 73 745 FBgn0027539 323.6833333 14.69666667 22.53666667 0.225529066 4.967112724 3.239165804 2 2 2 0.5 "dme-miR-996-3p,dme-miR-279-3p" 6mer2-7 CTAGTC 3R 24922285 24922290 + 3R_24922285_24922290_+ 0.801266666 0.900498552 0.850882609 0.070167549 CG11168 FBtr0306089|FBtr0084715|FBtr0337009|FBtr0337010 24920050|24922185|24922185|24922185 24922385|24922385|24922385|24922385 3R + 24922272 24922352 3'utr CG11168 FlyBase G45600.1 TTTTACTCATTTGCTAGTCGTTGATGCCATCTCGATGCTGGCTTTGCTCCACATAAGGCAGCTCACATGTTAAGTATTTTG 31 24922283 0.773283678 12 30 262 0.973684211 1.568201724 0.157894737 0.193548387 0.342105263 31 1 0 37 3R:24922272-24922352 6 CG11168 FBtr0337010|FBtr0337009|FBtr0084715|FBtr0306089 24922185|24922185|24922185|24920050 24922385|24922385|24922385|24922385 CTAGTC 6mer2-7 "dme-miR-996-3p,dme-miR-279-3p" 3R + 24922269 24922337 3'utr CG11168 FlyBase G34389.1 TTTTTTTACTCATTTGCTAGTCGTTGATGCCATCTCGATGCTGGCTTTGCTCCACATAAGGCAGCTCAC 28 24922282 0.946826023 9 27 216 0.888888889 1.602059991 0.311111111 0.392857143 0.622222222 28 5 0 40 3R:24922269-24922337 6 23.5 746 FBgn0039249 138.3333333 5.443333333 8.356666667 0.169879518 4.317207593 2.812126047 2 3 2.5 0.5 dme-miR-317-3p 7mer-m8 TGTGTTC 3R 25041103 25041109 - 3R_25041103_25041109_- 0.590294932 0.654817753 0.622556343 0.04562458 5PtaseI FBtr0299661 25041064 25041727 3R - 25041089 25041156 3'utr 5PtaseI FlyBase G54507.1 AAACTATTTCTTTGAATCTGTGTTTTAAGTATGTACATTGTTTATTATGTGTTCGTCTTCTTTAAGAA 25 25041109 0.707009066 10 22 307 0.833333333 1.397940009 0.366666667 0.16 0.3 25 5 0 25 3R:25041089-25041156 7 5PtaseI FBtr0299661 25041064 25041727 TGTGTTC 7mer-m8 dme-miR-317-3p 3R - 25041088 25041122 3'utr 5PtaseI FlyBase G41158.1 ACATTGTTTATTATGTGTTCGTCTTCTTTAAGAAA 18 25041111 0.683460874 8 14 224 0.826086957 0.801632346 0.260869565 0.166666667 0.347826087 18 2 2 19 3R:25041088-25041122 7 17 747 FBgn0259178 182.6666667 9.633333333 14.71333333 0.093065693 1.764705882 1.15541459 0 2 1 0.5 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 25101960 25101967 + 3R_25101960_25101967_+ 0.556895043 0.568587196 0.56274112 0.008267634 CG33095 FBtr0100204|FBtr0084774 25101745|25101745 25102146|25102146 3R + 25101921 25101979 3'utr CG33095 FlyBase G45710.1 TTTAGTAGTACCTTAAGTTTGAAATTTTTACAGTGATTTTGCATTTATATTAAGTAACA 34 25101959 0.991963354 7 34 383 1 1.633468456 0.046511628 0.264705882 0.418604651 34 0 0 43 3R:25101921-25101979 8 CG33095 FBtr0084774|FBtr0100204 25101745|25101745 25102146|25102146 TGCATTTA 8mer-A1 dme-miR-277-3p 3R + 25101935 25101978 3'utr CG33095 FlyBase G34468.1 AAGTTTGAAATTTTTACAGTGATTTTGCATTTATATTAAGTAAC 29 25101959 0.716080602 6 28 311 0.97826087 1.653212514 0.043478261 0.310344828 0.565217391 29 1 0 45 3R:25101935-25101978 8 31 748 FBgn0053095 476.96 16.58 25.46 0.064994968 1.869722557 1.217596229 1 1 1 0.5 dme-miR-8-3p 6mer2-7 AGTATT 3R 25261224 25261229 - 3R_25261224_25261229_- 0.804915429 0.519607998 0.662261713 0.201742797 CG10425 FBtr0084867 25260961 25261255 3R - 25261203 25261247 3'utr CG10425 FlyBase G54611.1 TTGTCCCGCTGCCCTTAAAGTATTCCCAAGTGCCCATAATTAAAT 13 25261226 0.620116571 7 12 86 0.923076923 1.079181246 0.076923077 0 0 13 1 0 12 3R:25261203-25261247 6 CG10425 FBtr0084867 25260961 25261255 AGTATT 6mer2-7 dme-miR-8-3p 3R - 25261202 25261269 stop_codon CG10425 FlyBase G41225.1 TGGAGTCCAAGTGAAATCTCTCTTGTCCCGCTGCCCTTAAAGTATTCCCAAGTGCCCATAATTAAATC 12 25261225 0.984016065 5 10 76 0.851851852 1.361727836 0.407407407 0.833333333 0.925925926 12 4 0 23 3R:25261202-25261269 6 11 749 FBgn0039304 196.3333333 17.07333333 25.98666667 0.056027165 0.644279578 0.423293997 -3 -4 -3.5 0.5 dme-miR-988-3p 7mer-m8 ACAAGGG 3R 25340067 25340073 + 3R_25340067_25340073_+ 0.567232678 0.432544393 0.499888536 0.09523901 CG11902 FBtr0300735 25339910 25340088 3R + 25340055 25340087 3'utr CG11902 FlyBase G45830.1 AAAAATAAAATTACAAGGGTTACAAATAAACGA 12 25340074 0.758450375 2 12 50 1 1.176091259 0 0.166666667 0.333333333 12 0 0 15 3R:25340055-25340087 7 CG11902 FBtr0300735 25339910 25340088 ACAAGGG 7mer-m8 dme-miR-988-3p 3R + 25340044 25340084 3'utr CG11902 FlyBase G34568.1 AATGTAAAGATAAAAATAAAATTACAAGGGTTACAAATAAA 18 25340074 0.946825159 2 18 78 1 1.361727836 0 0.222222222 0.391304348 18 0 0 23 3R:25340044-25340084 7 15 750 FBgn0028647 178 4.693333333 7.203333333 0.084269663 3.196022727 2.082369273 -7 -7 -7 0.5 dme-miR-14-3p 7mer-m8 AAGACTG 3R 25493192 25493198 + 3R_25493192_25493198_+ 0.584861039 0.535901672 0.560381355 0.034619453 CG5112 FBtr0084878 25493128 25493262 3R + 25493133 25493204 3'utr CG5112 FlyBase G45851.1 GTTTATGATGTATGATCGATCAACTTATTGTTAGAGAACATAGGGTGTGGGTAACGCTGAAGACTGTCGCTT 33 25493190 0.970304922 10 30 174 0.918918919 1.531478917 0.378378378 0.090909091 0.189189189 33 3 0 34 3R:25493133-25493204 7 CG5112 FBtr0084878 25493128 25493262 AAGACTG 7mer-m8 dme-miR-14-3p 3R + 25493136 25493204 3'utr CG5112 FlyBase G34581.1 TATGATGTATGATCGATCAACTTATTGTTAGAGAACATAGGGTGTGGGTAACGCTGAAGACTGTCGCTT 30 25493190 0.966748859 10 30 163 1 1.602059991 0.25 0.3 0.475 30 0 0 40 3R:25493136-25493204 7 25 751 FBgn0039341 334.3133333 22.37333333 33.99666667 0.074780146 1.117401669 0.735366212 2 2 2 0.5 dme-miR-304-5p 8mer-A1 TGAGATTA 3R 25493955 25493962 - 3R_25493955_25493962_- 0.559633822 0.565686237 0.562660029 0.004279693 CG33494 FBtr0089607|FBtr0336802 25493577|25493479 25494014|25494014 3R - 25493909 25494021 stop_codon CG33494 FlyBase G54708.1 TGGGTAACCAGTTCCAAAGTCCACTTAGTCTTTGCTCTCGAATCGGTCATCCAAGCCTTTGAGATTACATTTAAATATGTCATGAAATACATAGCATGATATACATACATATA 64 25493963 0.9826232 14 60 522 0.930555556 1.826074803 0.125 0.109375 0.208333333 64 5 0 67 3R:25493909-25494021 8 CG33494 FBtr0336802|FBtr0089607 25493479|25493577 25494014|25494014 TGAGATTA 8mer-A1 dme-miR-304-5p 3R - 25493947 25494006 3'utr CG33494 FlyBase G41296.1 AAAGTCCACTTAGTCTTTGCTCTCGAATCGGTCATCCAAGCCTTTGAGATTACATTTAAA 25 25493963 0.763605717 8 22 199 0.921052632 1.243038049 0.131578947 0.4 0.605263158 25 2 1 35 3R:25493947-25494006 8 32 752 FBgn0053494 1664.706667 279.3966667 423.6866667 0.019222606 0.114532505 0.075527512 1 1 1 0.5 dme-miR-8-3p 7mer-A1 AGTATTA 3R 25600961 25600967 + 3R_25600961_25600967_+ 0.598040112 0.456198849 0.527119481 0.100296945 msi FBtr0305219|FBtr0333664|FBtr0084881|FBtr0333665|FBtr0084882|FBtr0333663|FBtr0305218 25600746|25600746|25600746|25600746|25600746|25600746|25600746 25601136|25608423|25601136|25601136|25602421|25601136|25601136 3R + 25600901 25600982 5'utr msi FlyBase G45863.1 GAAGTTGGTTTTCCTTTGAGTTTGGCTAAGTTAGTAGTCCGATACACGGAAGGCAAATTAAGTATTATATTTAAGGCGCCCT 20 25600958 0.916346268 9 19 162 0.956521739 1.342422681 0.304347826 0.15 0.260869565 20 1 0 22 3R:25600901-25600982 7 msi FBtr0333663|FBtr0305218|FBtr0084882|FBtr0084881|FBtr0333665|FBtr0305219|FBtr0333664 25600746|25600746|25600746|25600746|25600746|25600746|25600746 25601136|25601136|25602421|25601136|25601136|25601136|25608423 AGTATTA 7mer-A1 dme-miR-8-3p 3R + 25600914 25600972 5'utr msi FlyBase G34587.1 CTTTGAGTTTGGCTAAGTTAGTAGTCCGATACACGGAAGGCAAATTAAGTATTATATTT 7 25600958 0.899608728 6 7 52 1 1.113943352 0.076923077 0.571428571 0.769230769 7 0 0 13 3R:25600914-25600972 7 7 753 FBgn0011666 1019.796667 32.88 50.09666667 0.006864113 0.212895377 0.139729856 3 3 3 0.5 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 25601698 25601705 + 3R_25601698_25601705_+ 0.457573086 0.470356985 0.463965035 0.009039582 msi FBtr0333664|FBtr0084882 25600746|25600746 25608423|25602421 3R + 25601676 25601729 3'utr msi FlyBase G45869.1 CTATCTACCCAAATCTGTTATTGTACTTAATTATATAACAATTACAAATACCAC 38 25601697 0.760864444 5 38 424 1 1.681241237 0.020833333 0.184210526 0.354166667 38 0 0 48 3R:25601676-25601729 8 msi FBtr0084882|FBtr0333664 25600746|25600746 25602421|25608423 GTACTTAA 8mer-A1 dme-miR-252-5p 3R + 25601668 25601720 3'utr msi FlyBase G34590.1 CCTACCTTCTATCTACCCAAATCTGTTATTGTACTTAATTATATAACAATTAC 24 25601697 0.956187348 5 24 260 1 1.579783597 0 0.375 0.605263158 24 0 0 38 3R:25601668-25601720 8 30 754 FBgn0011666 1019.796667 32.88 50.09666667 0.029417629 0.912408759 0.598842238 1 1 1 0.5 dme-miR-263a-5p 8mer-m1 GTGCCATT 3R 25602908 25602915 + 3R_25602908_25602915_+ 0.526655035 0.485438476 0.506046755 0.029144467 msi FBtr0333664 25600746 25608423 3R + 25602803 25602924 3'utr msi FlyBase G45875.1 GCTGGGCCTAAGTCGAGGCTCAAATACCACATCTCCATTTGCAGAAACTAATTTATTTATTTATTATTTACGCTTAAGAATCTAACACATTCCAGACATGCTATGGTGCCATTTACTTATCC 35 25602906 0.951635923 12 34 266 0.976190476 1.612783857 0.023809524 0.171428571 0.30952381 35 1 0 41 3R:25602803-25602924 8 msi FBtr0333664 25600746 25608423 GTGCCATT 8mer-m1 dme-miR-263a-5p 3R + 25602857 25602916 3'utr msi FlyBase G34594.1 ATTTATTTATTATTTACGCTTAAGAATCTAACACATTCCAGACATGCTATGGTGCCATTT 19 25602906 0.715734264 6 19 127 1 1.431363764 0 0.315789474 0.518518519 19 0 0 27 3R:25602857-25602916 8 16 755 FBgn0011666 1019.796667 32.88 50.09666667 0.015689402 0.486618005 0.319382527 2 2 2 0.5 dme-miR-252-5p 8mer-m1 GTACTTAG 3R 25665245 25665252 + 3R_25665245_25665252_+ 0.622910271 0.615515075 0.619212673 0.005229196 RASSF8 FBtr0084898 25664654 25665640 3R + 25665211 25665295 3'utr RASSF8 FlyBase G45893.1 TAGAATTCACAATTCGAATTACACAAAACTTATTGTACTTAGCAATTAGCGCAGCTTTAAAAAAACAAATTAGCAATGCTTTGTT 13 25665244 0.971758721 7 13 78 1 1.204119983 0.0625 0.153846154 0.3125 13 0 0 16 3R:25665211-25665295 8 RASSF8 FBtr0084898 25664654 25665640 GTACTTAG 8mer-m1 dme-miR-252-5p 3R + 25665233 25665275 3'utr RASSF8 FlyBase G34611.1 ACAAAACTTATTGTACTTAGCAATTAGCGCAGCTTTAAAAAAA 7 25665243 0.761161954 4 7 41 1 0.954242509 0 0.285714286 0.444444444 7 0 0 9 3R:25665233-25665275 8 7.5 756 FBgn0261986 768.6366667 27.28 42.04333333 0.009757536 0.274926686 0.178387378 1 2 1.5 0.5 dme-miR-317-3p 8mer-A1 TGTGTTCA 3R 25683350 25683357 + 3R_25683350_25683357_+ 0.599439679 0.559098715 0.579269197 0.028525395 CG5028 FBtr0113289 25683087 25683780 3R + 25683310 25683381 3'utr CG5028 FlyBase G45907.2 AACCCAAACAAAATATGTTACCCCGGCTAAATGTCCATTGTGTGTTCATTCGATGTCCAAGTGTGATAATTC 12 25683348 0.916947305 9 11 80 0.866666667 1.113943352 0.2 0.166666667 0.333333333 12 2 0 13 3R:25683310-25683381 8 CG5028 FBtr0113289 25683087 25683780 TGTGTTCA 8mer-A1 dme-miR-317-3p 3R + 25683332 25683383 3'utr CG5028 FlyBase G34623.1 CCGGCTAAATGTCCATTGTGTGTTCATTCGATGTCCAAGTGTGATAATTCAG 8 25683348 0.778352957 5 8 69 1 1 0.5 0.25 0.4 8 0 0 10 3R:25683332-25683383 8 6 757 FBgn0039358 738.9366667 46.93 71.87666667 0.008119776 0.127849989 0.083476325 2 2 2 0.5 dme-miR-968-5p 6mer2-7 CTACTT 3R 25684077 25684082 - 3R_25684077_25684082_- 0.531859197 0.564001391 0.547930294 0.022727968 RpL27 FBtr0331362 25683621 25684094 3R - 25683976 25684078 NoAnnotation G54747.1 TTGTGGTTACTGGATTTGTCGCTCTTTTTTAAGGTTTAATAAACAAAGAAGTAATTCTGATAAAACTGACCGAAGTGGATCCTGTGCCTTCTTATTAAGTGTG 47 25684077 0.973029356 18 43 345 0.981818182 1.73239376 0.127272727 0.14893617 0.272727273 47 1 0 54 3R:25683976-25684078 2 RpL27 FBtr0331362 25683621 25684094 CTACTT 6mer2-7 dme-miR-968-5p 3R - 25683987 25684168 stop_codon RpL27 FlyBase G41330.1 AGACCCGCGTCAAGTTCGAGTCCGTCTACAAGGAGGGCAAGAACAAGTGGTTCTTCCAGAAGCTGCGTTTCTAAGCTGCCCATTCGCTACTTGTGGTTACTGGATTTGTCGCTCTTTTTTAAGGTTTAATAAACAAAGAAGTAATTCTGATAAAACTGACCGAAGTGGATCCTGTGCCTTCT 55 25684077 0.956468531 23 47 414 0.853658537 1.06694679 0.097560976 0.4 0.597560976 55 7 5 70 3R:25683987-25684168 6 25 758 FBgn0039359 9552.62 2097.91 3191.89 0.002617083 0.011916622 0.00783235 -5 -5 -5 0.5 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 25699011 25699017 - 3R_25699011_25699017_- 0.556929266 0.556795961 0.556862614 9.43E-05 LpR2 FBtr0113387|FBtr0113385|FBtr0113384 25698725|25698725|25698725 25699984|25699984|25699984 3R - 25698949 25699045 3'utr LpR2 FlyBase G54762.1 TTTCTTTCTTGGGTATTCAAAACAATTTGCTGTGATCAGTTTAAAAGCATTAGACCTGCATTAAATCATCTTATTCGTAGTGATTTTACTATTCTTC 537 25699019 0.773574578 19 522 4419 0.969984202 1.788168371 0.120063191 0.143389199 0.273301738 537 10 9 614 3R:25698949-25699045 7 LpR2 FBtr0113387|FBtr0113385|FBtr0113384 25698725|25698725|25698725 25699984|25699984|25699984 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R - 25698908 25699044 3'utr LpR2 FlyBase G41346.1 TTCTTTCTTGGGTATTCAAAACAATTTGCTGTGATCAGTTTAAAAGCATTAGACCTGCATTAAATCATCTTATTCGTAGTGATTTTACTATTCTTCATTTATTTAGTGTATAAACAAGCTTTCAATCATTTTAACTT 355 25699019 0.764855459 19 343 2872 0.970260223 1.939519253 0.128252788 0.397183099 0.602230483 355 11 5 522 3R:25698908-25699044 7 425 759 FBgn0051092 94.66666667 3.816666667 5.916666667 4.48943662 111.3537118 71.83098592 2 2 2 0.5 dme-miR-14-3p 8mer-A1 AAGACTGA 3R 25741857 25741864 - 3R_25741857_25741864_- 0.524833367 0.403761929 0.464297648 0.085610479 LpR1 FBtr0301467|FBtr0335236|FBtr0113480|FBtr0301470|FBtr0335235|FBtr0335237|FBtr0301469|FBtr0301466|FBtr0335238|FBtr0301471 25741346|25741346|25741346|25741346|25741346|25741346|25741346|25741346|25741346|25741346 25741979|25741979|25741979|25741979|25741979|25741979|25741979|25741979|25741979|25741979 3R - 25741836 25741878 3'utr LpR1 FlyBase G54784.1 AACACACACGCCTGAAGACTGAGCAACTCTGTGTATTGTGTAA 11 25741866 0.959682383 4 9 53 0.866666667 1.113943352 0.066666667 0.272727273 0.466666667 11 2 0 13 3R:25741836-25741878 8 LpR1 FBtr0335237|FBtr0335235|FBtr0301466|FBtr0301469|FBtr0335238|FBtr0301471|FBtr0301467|FBtr0335236|FBtr0113480|FBtr0301470 25741346|25741346|25741346|25741346|25741346|25741346|25741346|25741346|25741346|25741346 25741979|25741979|25741979|25741979|25741979|25741979|25741979|25741979|25741979|25741979 AAGACTGA 8mer-A1 dme-miR-14-3p 3R - 25741843 25741873 3'utr LpR1 FlyBase G41358.1 ACACGCCTGAAGACTGAGCAACTCTGTGTAT 5 25741866 0.904113456 2 4 19 0.833333333 0.698970004 0 0.2 0.333333333 5 1 0 5 3R:25741843-25741873 8 8 760 FBgn0066101 6 0.153333333 0.226666667 1.333333333 52.17391304 35.29411765 2 2 2 0.5 dme-miR-184-3p 7mer-m8 TCCGTCC 3R 25887949 25887955 + 3R_25887949_25887955_+ 0.536519022 0.541030568 0.538774795 0.003190183 SppL FBtr0084911|FBtr0344118|FBtr0084909|FBtr0300820|FBtr0300819 25887365|25887365|25887365|25887365|25887365 25888071|25888071|25888230|25888071|25888230 3R + 25887916 25888043 3'utr SppL FlyBase G45924.1 AATCGAGATCCGTTTCCGTTTCACACGCTCATTTCCGTCCTTCGATTTTTTCGTTTTGTCACCCAATGTTTCCCACACATCTTCACAACCATAATGATGTTTTGCCAAAATGCATGTGTTCGTTGCAA 618 25887948 0.984084791 15 613 5045 0.990691489 2.872156273 0.167553191 0.165048544 0.313829787 618 7 0 745 3R:25887916-25888043 7 SppL FBtr0084909|FBtr0300820|FBtr0300819|FBtr0084911|FBtr0344118 25887365|25887365|25887365|25887365|25887365 25888230|25888071|25888230|25888071|25888071 TCCGTCC 7mer-m8 dme-miR-184-3p 3R + 25887922 25887976 3'utr SppL FlyBase G34634.1 GATCCGTTTCCGTTTCACACGCTCATTTCCGTCCTTCGATTTTTTCGTTTTGTCA 396 25887948 0.725859129 8 386 3013 0.977309562 2.002166062 0.141004862 0.396464646 0.612641815 396 9 5 603 3R:25887922-25887976 7 501 761 FBgn0039381 696.8266667 34.86 53.62333333 0.718973633 14.37177281 9.342947722 1 1 1 0.5 dme-miR-263a-5p 8mer-m1 GTGCCATT 3R 25892861 25892868 + 3R_25892861_25892868_+ 0.454734723 0.495532604 0.475133663 0.028848472 Lnk FBtr0339160|FBtr0339162|FBtr0084937|FBtr0339161|FBtr0084935|FBtr0084936 25892801|25892042|25892801|25892042|25892801|25892801 25893270|25893270|25893270|25893270|25893270|25893270 3R + 25892826 25892871 3'utr Lnk FlyBase G45937.1 GCATTTCGCGGCTTAACCAGCGGAACTTTACTTTTGTGCCATTTTA 9 25892860 0.982325781 4 8 90 0.888888889 0.903089987 0 0 0 9 1 0 8 3R:25892826-25892871 8 Lnk FBtr0084935|FBtr0084936|FBtr0084937|FBtr0339161|FBtr0339160|FBtr0339162 25892801|25892801|25892801|25892042|25892801|25892042 25893270|25893270|25893270|25893270|25893270|25893270 GTGCCATT 8mer-m1 dme-miR-263a-5p 3R + 25892825 25892886 3'utr Lnk FlyBase G34642.1 TGCATTTCGCGGCTTAACCAGCGGAACTTTACTTTTGTGCCATTTTAATCATTGTCCTAAAG 8 25892860 0.993731794 4 5 65 0.8 1.079181246 0.066666667 0.5 0.733333333 8 3 0 12 3R:25892825-25892886 8 7 762 FBgn0028717 647.6666667 24.78 37.87333333 0.010808029 0.282485876 0.184826615 1 1 1 0.5 dme-miR-317-3p 8mer-A1 TGTGTTCA 3R 25893028 25893035 + 3R_25893028_25893035_+ 0.525900056 0.585530311 0.555715183 0.042164919 Lnk FBtr0339160|FBtr0339162|FBtr0084937|FBtr0339161|FBtr0084935|FBtr0084936 25892801|25892042|25892801|25892042|25892801|25892801 25893270|25893270|25893270|25893270|25893270|25893270 3R + 25892917 25893043 3'utr Lnk FlyBase G45937.3 ATGTGCGTTCTTTGCTTTCTTGATTCACTTGTTTCTATTTTAGTTAGTACCTCTTTTGGAAGACATGAAGTAACTGAACATTATTATGTATACATTATATAGCTAAATGTGTGTGTTCATTTTAAGT 25 25893030 0.770772092 15 24 224 0.964285714 1.431363764 0.142857143 0.12 0.214285714 25 1 0 27 3R:25892917-25893043 8 Lnk FBtr0084935|FBtr0084936|FBtr0084937|FBtr0339161|FBtr0339160|FBtr0339162 25892801|25892801|25892801|25892042|25892801|25892042 25893270|25893270|25893270|25893270|25893270|25893270 TGTGTTCA 8mer-A1 dme-miR-317-3p 3R + 25893009 25893034 3'utr Lnk FlyBase G34644.1 CATTATATAGCTAAATGTGTGTGTTC 9 25893030 0.735286682 2 9 73 1 1.204119983 0.0625 0.444444444 0.6875 9 0 0 16 3R:25893009-25893034 7 9.5 763 FBgn0028717 647.6666667 24.78 37.87333333 0.014668039 0.383373688 0.25083612 -2 -2 -2 0.5 dme-miR-7-5p 8mer-A1 GTCTTCCA 3R 26022783 26022790 + 3R_26022783_26022790_+ 0.656161538 0.660142587 0.658152062 0.002815063 E(spl)m3-HLH FBtr0084958 26022693 26023127 3R + 26022749 26022794 3'utr E(spl)m3-HLH FlyBase G45962.1 AATGGCTATTGACCGTTCTGCAACAAGATCCGTTGTCTTCCAAAGT 8 26022782 0.976566965 5 8 54 1 0.954242509 0.333333333 0.125 0.222222222 8 0 0 9 3R:26022749-26022794 8 E(spl)m3-HLH FBtr0084958 26022693 26023127 GTCTTCCA 8mer-A1 dme-miR-7-5p 3R + 26022762 26022796 3'utr E(spl)m3-HLH FlyBase G34665.1 CGTTCTGCAACAAGATCCGTTGTCTTCCAAAGTAA 5 26022783 0.614741982 3 5 34 1 0.84509804 0.571428571 0.2 0.428571429 5 0 0 7 3R:26022762-26022796 8 6 764 FBgn0002609 41.66666667 4.113333333 6.463333333 0.144 1.458670989 0.928313564 1 0 0.5 0.5 dme-miR-980-3p 7mer-A1 GCAGCTA 3R 26049609 26049615 + 3R_26049609_26049615_+ 0.667340378 0.627681667 0.647511022 0.028042936 gro FBtr0337057|FBtr0305047|FBtr0339900 26048604|26048604|26048604 26049911|26049911|26049911 3R + 26049587 26049625 3'utr gro FlyBase G45976.1 AGTGTAAAATCCTATATTTTGAGCAGCTAAACCCAACAC 15 26049606 0.718880605 4 15 87 1 1.204119983 0 0.066666667 0.125 15 0 0 16 3R:26049587-26049625 7 gro FBtr0337057|FBtr0339900|FBtr0305047 26048604|26048604|26048604 26049911|26049911|26049911 GCAGCTA 7mer-A1 dme-miR-980-3p 3R + 26049593 26049626 3'utr gro FlyBase G34681.1 AAATCCTATATTTTGAGCAGCTAAACCCAACACA 6 26049606 0.944704627 2 6 32 1 0.954242509 0 0.5 0.666666667 6 0 0 9 3R:26049593-26049626 7 10.5 765 FBgn0001139 2815.8 93.08 143.0433333 0.003728958 0.112806188 0.07340433 3 3 3 0.5 dme-miR-965-3p 7mer-m8 TACGCTT 3R 26054491 26054497 - 3R_26054491_26054497_- 0.619902506 0.620008954 0.61995573 7.53E-05 Dak1 FBtr0084976 26054235 26054574 3R - 26054476 26054616 stop_codon Dak1 FlyBase G54802.1 TTCGGGGAGGTGGAAAAGATATTTGTGGCCAGCGGCTTCTAGATTTCCTGTTCATATTCCGGTTATGTGTGTAGTGCTATCCTTACCTTTCATTTGTACCCTCTAAAAAAATACATATATACGCTTGTTAATAGTAATGCA 57 26054489 0.891698128 20 54 469 0.957142857 1.525044807 0.1 0.210526316 0.357142857 57 2 1 67 3R:26054476-26054616 7 Dak1 FBtr0084976 26054235 26054574 TACGCTT 7mer-m8 dme-miR-965-3p 3R - 26054477 26054552 3'utr Dak1 FlyBase G41368.1 ATGTGTGTAGTGCTATCCTTACCTTTCATTTGTACCCTCTAAAAAAATACATATATACGCTTGTTAATAGTAATGC 38 26054488 0.674912521 14 34 332 0.933333333 1.447158031 0.15 0.394736842 0.616666667 38 3 1 56 3R:26054477-26054552 7 22 766 FBgn0028833 760.9966667 77.71 118.7166667 0.028909456 0.283103848 0.185315176 -8 -9 -8.5 0.5 dme-miR-308-3p 7mer-m1 TGTGATT 3R 26184875 26184881 + 3R_26184875_26184881_+ 0.429170257 0.44208842 0.435629339 0.009134476 CG31323 FBtr0084988|FBtr0307339 26184611|26184611 26187307|26184974 3R + 26184854 26184905 3'utr CG31323 FlyBase G45999.1 ATGGAATTCATCAAGCAATTATGTGATTTTTAAGCGAATACTTAACAACTAT 39 26184872 0.990043342 7 39 384 1 1.785329835 0 0.41025641 0.62295082 39 0 0 61 3R:26184854-26184905 7 CG31323 FBtr0307339|FBtr0084988 26184611|26184611 26184974|26187307 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 26184815 26184899 3'utr CG31323 FlyBase G34701.1 ACGCTCGGAAACACACTCTCTCTTACACACAATAACATTATGGAATTCATCAAGCAATTATGTGATTTTTAAGCGAATACTTAAC 31 26184872 0.990095896 11 28 285 0.909090909 1.602059991 0 0.290322581 0.5 31 4 0 40 3R:26184815-26184899 7 31 767 FBgn0051323 9.51 0.34 0.533333333 3.259726604 91.17647059 58.125 3 3 3 0.5 dme-miR-11-3p 7mer-m1 TGTGATG 3R 26234358 26234364 + 3R_26234358_26234364_+ 0.564536722 0.602445503 0.583491112 0.02680557 CG12290 FBtr0339612 26233100 26234700 3R + 26234341 26234514 3'utr CG12290 FlyBase G46018.1 ATTTCAAAACCAATTATTGTGATGTTGAGCAAGGGGGCAACCAAGAATGTAATTTCGAAATGCATTAAAAATAACTTAAAACATGTATTAATAGTTATAATATATACAAGCTTATGTGTGTATACATACTTTACTAAATAGTGATATTTTTTCAAATTTATTCAACTGTCATTC 71 26234357 0.984499027 18 68 545 0.938271605 1.579783597 0.172839506 0.126760563 0.234567901 71 4 1 76 3R:26234341-26234514 7 CG12290 FBtr0339612 26233100 26234700 TGTGATG 7mer-m1 dme-miR-11-3p 3R + 26234311 26234382 3'utr CG12290 FlyBase G34715.1 ATTCATGCATGTGTGTCGGACAAAGGAAATATTTCAAAACCAATTATTGTGATGTTGAGCAAGGGGGCAACC 25 26234357 0.980170331 8 24 171 0.923076923 1.556302501 0.512820513 0.36 0.58974359 25 3 0 36 3R:26234311-26234382 7 38 768 FBgn0039419 2058.006667 56.21 86.04666667 0.018464469 0.676036292 0.441620826 1 1 1 0.5 dme-miR-184-5p 7mer-m8 TGATAAG 3R 26254725 26254731 - 3R_26254725_26254731_- 0.618051389 0.542235099 0.580143244 0.05361022 Ald FBtr0084994|FBtr0339614 26254067|26254601 26255341|26255341 3R - 26254692 26254792 3'utr Ald FlyBase G54819.1 GATCCACTATGAAAATCGATGTTTTACCATTATTATTATTATTAAACTTTATATTTATGATTGATAAGTATAAGTGAAACAAATGACGAGAATAAACAAAC 12 26254709 0.992094115 9 10 114 0.769230769 1 0.230769231 0.083333333 0.153846154 12 3 0 10 3R:26254692-26254792 7 Ald FBtr0339614|FBtr0084994 26254601|26254067 26255341|26255341 TGATAAG 7mer-m8 dme-miR-184-5p 3R - 26254692 26254796 3'utr Ald FlyBase G41383.1 AAAAGATCCACTATGAAAATCGATGTTTTACCATTATTATTATTATTAAACTTTATATTTATGATTGATAAGTATAAGTGAAACAAATGACGAGAATAAACAAAC 13 26254761 0.989412884 9 12 114 1 1.301029996 0.05 0.384615385 0.6 13 0 0 20 3R:26254692-26254796 7 3 769 FBgn0000064 2998.926667 179.2266667 272.1633333 0.001000358 0.016738581 0.011022793 -22 30 4 0.5 dme-miR-282-5p 6mer2-7 GAGGCT 3R 26254847 26254852 - 3R_26254847_26254852_- 0.514210594 0.660331622 0.587271108 0.10332315 Ald FBtr0084994|FBtr0339614 26254067|26254601 26255341|26255341 3R - 26254808 26254881 3'utr Ald FlyBase G54820.1 CAATCACTATCAGCAACACCTAAATGTATGAGGCTTGTAACATTGAAGTCGCACAACGTTTTTTGAATTTTTTT 186 26254853 0.914834612 10 185 1192 0.995495495 2.344392274 0.018018018 0.150537634 0.288288288 186 1 0 221 3R:26254808-26254881 6 Ald FBtr0339614|FBtr0084994 26254601|26254067 26255341|26255341 GAGGCT 6mer2-7 dme-miR-282-5p 3R - 26254826 26254876 3'utr Ald FlyBase G41384.1 ACTATCAGCAACACCTAAATGTATGAGGCTTGTAACATTGAAGTCGCACAA 67 26254853 0.946240926 8 67 408 1 2.012837225 0 0.417910448 0.621359223 67 0 0 103 3R:26254826-26254876 6 125 770 FBgn0000064 2998.926667 179.2266667 272.1633333 0.041681579 0.697440857 0.459283029 1 1 1 0.5 dme-miR-1003-3p 8mer-A1 ATGTGAGA 3R 26453743 26453750 + 3R_26453743_26453750_+ 0.626399966 0.621563663 0.623981815 0.003419781 CG5447 FBtr0085012 26453708 26454585 3R + 26453708 26453821 stop_codon CG5447 FlyBase G46024.1 GACTTCCGCTTTCCCATTCAGCCAACGAGTTTTTCATGTGAGATCGAGCAGCTACAGTCGCATCAACAGGCATGTGAAGGAGAAGAGTCCGTTTCAGCAATTATCAAGCAAAAG 34 26453745 0.970220556 11 32 180 0.945945946 1.544068044 0.216216216 0.088235294 0.162162162 34 2 0 35 3R:26453708-26453821 8 CG5447 FBtr0085012 26453708 26454585 ATGTGAGA 8mer-A1 dme-miR-1003-3p 3R + 26453731 26453772 stop_codon CG5447 FlyBase G34720.1 AACGAGTTTTTCATGTGAGATCGAGCAGCTACAGTCGCATCA 13 26453745 0.711705003 4 12 74 0.952380952 1.301029996 0.19047619 0.461538462 0.666666667 13 1 0 20 3R:26453731-26453772 8 15 771 FBgn0039427 734.0633333 64.46 98.42666667 0.020434204 0.232702451 0.152397724 -2 -2 -2 0.5 dme-miR-11-3p 7mer-m1 TGTGATG 3R 26469771 26469777 + 3R_26469771_26469777_+ 0.508695937 0.503738629 0.506217283 0.00350534 CG5455 FBtr0085015|FBtr0085016 26469401|26469401 26470008|26470008 3R + 26469603 26469788 3'utr CG5455 FlyBase G46036.1 CATATAATTATATACGCCTATCCATAGCTCAAGTTAGTTATACACATATTATGTTGCCTTTAGTTTAAGCTTAAAACGAGCAGATATATATGCTCAGACATCCCATCTGGTGTCAATGATATTTTGGAATTTTTGTGATCGATTGTGATCATTTTTCAAGCACTTTATTGTGATGATCCCCTAAAT 72 26469769 0.988761666 21 68 622 0.956521739 1.643452676 0.054347826 0.236111111 0.402173913 72 3 1 88 3R:26469603-26469788 7 CG5455 FBtr0085015|FBtr0085016 26469401|26469401 26470008|26470008 TGTGATG 7mer-m1 dme-miR-11-3p 3R + 26469695 26469786 3'utr CG5455 FlyBase G34735.1 CTCAGACATCCCATCTGGTGTCAATGATATTTTGGAATTTTTGTGATCGATTGTGATCATTTTTCAAGCACTTTATTGTGATGATCCCCTAA 47 26469770 0.987461187 15 45 402 0.970588235 1.342422681 0.220588235 0.361702128 0.558823529 47 0 2 66 3R:26469695-26469786 7 36 772 FBgn0039430 151.6666667 6.406666667 9.843333333 0.237362637 5.619146722 3.657297663 2 1 1.5 0.5 dme-miR-986-5p 7mer-A1 TTCGAGA 3R 26594944 26594950 + 3R_26594944_26594950_+ 0.636606984 0.590301008 0.613453996 0.032743287 scrib FBtr0308622|FBtr0308620|FBtr0335522|FBtr0308621|FBtr0308625 26594814|26594814|26594814|26594814|26594814 26595018|26596188|26596188|26596188|26596188 3R + 26594919 26594954 3'utr scrib FlyBase G46052.1 AGTGTTTATTTCGAACGAGACTTTTTTCGAGACTAA 7 26594942 0.730538459 2 6 49 0.875 0.84509804 0.25 0.142857143 0.25 7 1 0 7 3R:26594919-26594954 7 scrib FBtr0308625|FBtr0308621|FBtr0335522|FBtr0308620|FBtr0308622 26594814|26594814|26594814|26594814|26594814 26596188|26596188|26596188|26596188|26595018 TTCGAGA 7mer-A1 dme-miR-986-5p 3R + 26594926 26594959 3'utr scrib FlyBase G34742.1 ATTTCGAACGAGACTTTTTTCGAGACTAAGCTAC 8 26594942 0.975840858 3 7 52 1 0.954242509 0.222222222 0.125 0.222222222 8 0 0 9 3R:26594926-26594959 7 6.5 773 FBgn0263289 2418.266667 41.02 62.81333333 0.002687876 0.158459288 0.103481214 2 2 2 0.5 dme-miR-263a-5p 8mer-A1 GTGCCATA 3R 26596098 26596105 + 3R_26596098_26596105_+ 0.580054114 0.578031775 0.579042945 0.001429982 scrib FBtr0308620|FBtr0335522|FBtr0308621|FBtr0308625 26594814|26594814|26594814|26594814 26596188|26596188|26596188|26596188 3R + 26596043 26596121 3'utr scrib FlyBase G46055.1 CCATTACCATTACTATTATTAATCATCCACATATGTACGTATTTGTCATCGATTTGTGCCATACATATTTTATGTAACT 19 26596096 0.806837107 7 16 178 0.913043478 1.322219295 0 0.210526316 0.347826087 19 2 0 21 3R:26596043-26596121 8 scrib FBtr0308625|FBtr0308621|FBtr0335522|FBtr0308620 26594814|26594814|26594814|26594814 26596188|26596188|26596188|26596188 GTGCCATA 8mer-A1 dme-miR-263a-5p 3R + 26596081 26596122 3'utr scrib FlyBase G34744.1 GTATTTGTCATCGATTTGTGCCATACATATTTTATGTAACTC 20 26596097 0.739332137 6 20 184 1 1.447158031 0 0.3 0.5 20 0 0 28 3R:26596081-26596122 8 17.5 774 FBgn0263289 2418.266667 41.02 62.81333333 0.007236588 0.42662116 0.278603269 2 1 1.5 0.5 dme-miR-932-5p 7mer-A1 GAATTGA 3R 26872736 26872742 - 3R_26872736_26872742_- 0.450331264 0.633037515 0.541684389 0.129192793 Rb97D FBtr0100336|FBtr0100334|FBtr0085092|FBtr0085093|FBtr0100335|FBtr0100340|FBtr0100338|FBtr0100337 26872581|26872581|26872581|26872127|26872581|26872581|26872581|26872581 26873961|26873864|26873864|26873864|26873961|26873864|26873864|26873864 3R - 26872717 26872813 3'utr Rb97D FlyBase G54915.1 GGATTAACTAGACTTACGATTTATTCTCGACTCTCTCCTATTATTAAGCTGTTGTGCACGCCAAGGGCTTTGAATTGATCTTTATATATAATGCAGT 25 26872739 0.901085019 9 22 230 0.857142857 1.380211242 0.392857143 0.12 0.214285714 25 4 0 24 3R:26872717-26872813 7 Rb97D FBtr0100337|FBtr0100338|FBtr0100340|FBtr0100335|FBtr0085093|FBtr0085092|FBtr0100334|FBtr0100336 26872581|26872581|26872581|26872581|26872127|26872581|26872581|26872581 26873864|26873864|26873864|26873961|26873864|26873864|26873864|26873961 GAATTGA 7mer-A1 dme-miR-932-5p 3R - 26872712 26872768 3'utr Rb97D FlyBase G41457.1 AAGCTGTTGTGCACGCCAAGGGCTTTGAATTGATCTTTATATATAATGCAGTACTGA 27 26872739 0.767320575 8 23 247 0.789473684 1.176091259 0.263157895 0.259259259 0.473684211 27 7 1 30 3R:26872712-26872768 7 19.5 775 FBgn0004903 1478.54 66.86666667 102.46 0.013188686 0.291625125 0.190318173 -3 -3 -3 0.5 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 26961441 26961447 - 3R_26961441_26961447_- 0.47238645 0.50675857 0.48957251 0.024304745 Tsp97E FBtr0344665|FBtr0336726|FBtr0344664|FBtr0273310 26961062|26961399|26961399|26961062 26962355|26962355|26963005|26963005 3R - 26961412 26961473 3'utr Tsp97E FlyBase G54943.1 ATTAGATAATATTCTCTGTATTCTGTGCTGTGATTGAAGTAAATATGATCTTTAAAACAACA 80 26961450 0.8333937 7 78 767 0.979591837 1.982271233 0.091836735 0.175 0.326530612 80 2 0 96 3R:26961412-26961473 7 Tsp97E FBtr0344664|FBtr0273310|FBtr0336726|FBtr0344665 26961399|26961062|26961399|26961062 26963005|26963005|26962355|26962355 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R - 26961416 26961475 3'utr Tsp97E FlyBase G41480.1 CCATTAGATAATATTCTCTGTATTCTGTGCTGTGATTGAAGTAAATATGATCTTTAAAAC 77 26961450 0.704298682 10 75 741 0.982142857 1.740362689 0.125 0.337662338 0.544642857 77 1 1 110 3R:26961416-26961475 7 72.5 776 FBgn0039465 1547.256667 107.7333333 165.9533333 0.046857126 0.672957921 0.436869803 3 3 3 0.5 dme-miR-965-3p 7mer-m8 TACGCTT 3R 26977159 26977165 + 3R_26977159_26977165_+ 0.405883277 0.446554788 0.426219033 0.028759093 CG5521 FBtr0301134|FBtr0085069 26976544|26976544 26977878|26977878 3R + 26977135 26977180 3'utr CG5521 FlyBase G46133.1 TTTCTTTCCTTTTATGTCACATTTTACGCTTGGCCACAAGACGCAA 32 26977158 0.975931853 2 32 236 1 1.579783597 0.026315789 0.1875 0.315789474 32 0 0 38 3R:26977135-26977180 7 CG5521 FBtr0301134|FBtr0085069 26976544|26976544 26977878|26977878 TACGCTT 7mer-m8 dme-miR-965-3p 3R + 26977146 26977183 3'utr CG5521 FlyBase G34797.1 TTATGTCACATTTTACGCTTGGCCACAAGACGCAAATT 25 26977158 0.975116231 5 25 161 1 1.612783857 0.12195122 0.4 0.634146341 25 0 0 41 3R:26977146-26977183 7 28.5 777 FBgn0039466 1133.8 17.58666667 26.86 0.025136708 1.620545868 1.061057334 1 1 1 0.5 dme-miR-8-3p 7mer-A1 AGTATTA 3R 26977290 26977296 + 3R_26977290_26977296_+ 0.562769235 0.655559194 0.609164214 0.065612438 CG5521 FBtr0301134|FBtr0085069 26976544|26976544 26977878|26977878 3R + 26977246 26977325 3'utr CG5521 FlyBase G46134.1 CATAGAAACTTGCTCTGCCCATTCAAAGCAAAACATCAACTACTAGTATTATGTAATCGAGCTATATGTATAGGTATAGG 13 26977267 0.970643767 7 13 77 1 1.204119983 0.1875 0.153846154 0.3125 13 0 0 16 3R:26977246-26977325 7 CG5521 FBtr0301134|FBtr0085069 26976544|26976544 26977878|26977878 AGTATTA 7mer-A1 dme-miR-8-3p 3R + 26977241 26977320 3'utr CG5521 FlyBase G34798.1 TCGAACATAGAAACTTGCTCTGCCCATTCAAAGCAAAACATCAACTACTAGTATTATGTAATCGAGCTATATGTATAGGT 11 26977281 0.977281985 7 10 71 0.944444444 1.230448921 0.166666667 0.363636364 0.611111111 11 1 0 17 3R:26977241-26977320 7 5.5 778 FBgn0039466 1133.8 17.58666667 26.86 0.004850944 0.312736922 0.20476545 23 9 16 0.5 dme-miR-1007-3p 7mer-m8 TGAGCTT 3R 26985554 26985560 + 3R_26985554_26985560_+ 0.609882331 0.581944496 0.595913414 0.019755008 CG14253 FBtr0085072|FBtr0085073|FBtr0085071|FBtr0085070|FBtr0085074|FBtr0331701 26985256|26985256|26985256|26985256|26985256|26985256 26985706|26985706|26985706|26985706|26985706|26985706 3R + 26985519 26985605 3'utr CG14253 FlyBase G46144.1 TATTGTTGCATACTCTTGGGCTTATAAGTTCAATCTGAGCTTGAAATATGCCTGGTTAGGCCACATTGTCCAGTCGATTCCTTTGAC 17 26985535 0.985374742 10 16 148 0.913043478 1.322219295 0.173913043 0.294117647 0.47826087 17 2 0 21 3R:26985519-26985605 7 CG14253 FBtr0085070|FBtr0085071|FBtr0085073|FBtr0085072|FBtr0331701|FBtr0085074 26985256|26985256|26985256|26985256|26985256|26985256 26985706|26985706|26985706|26985706|26985706|26985706 TGAGCTT 7mer-m8 dme-miR-1007-3p 3R + 26985507 26985586 3'utr CG14253 FlyBase G34806.1 CTACAATACCATTATTGTTGCATACTCTTGGGCTTATAAGTTCAATCTGAGCTTGAAATATGCCTGGTTAGGCCACATTG 16 26985534 0.941184812 9 15 145 0.954545455 1.322219295 0.136363636 0.3125 0.5 16 1 0 21 3R:26985507-26985586 7 5.5 779 FBgn0039467 5123.18 287.6366667 442.6666667 0.001073552 0.019121345 0.012424699 19 20 19.5 0.5 dme-miR-2a-2-5p 6mer3-8 TGATGA 3R 27114831 27114836 + 3R_27114831_27114836_+ 0.566770817 0.639499005 0.603134911 0.051426603 CG5815 FBtr0339262|FBtr0085106 27114631|27114631 27115126|27115126 3R + 27114809 27114850 3'utr CG5815 FlyBase G46153.1 GTGCACAGGAAGAAGCGAATTCTGATGAAGATTGGTTTGCTG 7 27114840 0.97487744 4 7 44 1 0.954242509 0.444444444 0.285714286 0.444444444 7 0 0 9 3R:27114809-27114850 6 CG5815 FBtr0339262|FBtr0085106 27114631|27114631 27115126|27115126 TGATGA 6mer3-8 dme-miR-2a-2-5p 3R + 27114798 27114850 3'utr CG5815 FlyBase G34811.1 AAACCAGAGAAGTGCACAGGAAGAAGCGAATTCTGATGAAGATTGGTTTGCTG 7 27114840 0.949350225 4 7 36 1 1.041392685 0.545454545 0.285714286 0.545454545 7 0 0 11 3R:27114798-27114850 6 6.5 780 FBgn0027574 396.19 21.08 32.38333333 0.01640627 0.308349146 0.200720535 -9 -9 -9 0.5 dme-miR-308-3p 7mer-m1 TGTGATT 3R 27125025 27125031 - 3R_27125025_27125031_- 0.51991593 0.514642433 0.517279181 0.003728928 CG6051 FBtr0305050|FBtr0339264 27124757|27124757 27125642|27125642 3R - 27125004 27125049 3'utr CG6051 FlyBase G55035.1 TTTTTGCGAAACATTTTTTGTGATTTATCGTAATTTTATATGTATT 71 27125025 0.635087439 10 69 829 0.978723404 1.662757832 0.361702128 0.267605634 0.446808511 71 1 1 92 3R:27125004-27125049 7 CG6051 FBtr0339264|FBtr0305050 27124757|27124757 27125642|27125642 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 27124989 27125094 3'utr CG6051 FlyBase G41560.1 ATTGCGCGATCAAGCTGATTTAGTAGGCGTTAACTGTAGCAGAAATTTTTGCGAAACATTTTTTGTGATTTATCGTAATTTTATATGTATTAATTCGCTTATGTTA 47 27125025 0.992890002 11 45 519 0.970588235 1.51851394 0.308823529 0.319148936 0.529411765 47 1 1 66 3R:27124989-27125094 7 55.5 781 FBgn0039492 806.82 24.12 36.87 0.068788577 2.300995025 1.505288853 -6 -6 -6 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 27156744 27156750 + 3R_27156744_27156750_+ 0.704275089 0.739287123 0.721781106 0.024757223 Men-b FBtr0085110|FBtr0085110|FBtr0085110 27156373|27156373|27156373 27157603|27157603|27157603 3R + 27156721 27156769 3'utr Men-b FlyBase G46176.1 AAAAATTATCATGTTATTAATTTTGTGATACCGAAACGTACGATACTAA 27 27156742 0.8680529 5 24 244 0.909090909 0.875061263 0.181818182 0.148148148 0.303030303 27 0 3 30 3R:27156721-27156769 7 Men-b FBtr0085110|FBtr0085110|FBtr0085110 27156373|27156373|27156373 27157603|27157603|27157603 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 27156709 27156846 3'utr Men-b FlyBase G34826.1 TTTTATATATGTAAAAATTATCATGTTATTAATTTTGTGATACCGAAACGTACGATACTAAATGACGACATTGACATGACGACTGTGACGGTGACTACGCCTTCGAAAAAGCAATTACGCAGTATTCTATTCTATCCT 29 27156742 0.987137413 15 26 228 0.875 0.942008053 0.075 0.310344828 0.5 29 2 3 35 3R:27156709-27156846 7 20.5 782 FBgn0029155 3172.966667 116.5433333 178.2166667 0.006460831 0.175900237 0.115028523 2 2 2 0.5 dme-miR-980-3p 6mer2-7 GCAGCT 3R 27157450 27157455 + 3R_27157450_27157455_+ 0.544426018 0.934617568 0.739521793 0.275907126 Men-b FBtr0301708|FBtr0085110 27157162|27156373 27157603|27157603 3R + 27157436 27157474 3'utr Men-b FlyBase G46179.1 ATTAACGCAATTAAGCAGCTTTGTTATAATTTATTGTTA 10 27157457 0.619581124 5 9 80 0.933333333 0.84509804 0 0.5 0.666666667 10 0 1 14 3R:27157436-27157474 6 Men-b FBtr0085110|FBtr0301708 27156373|27157162 27157603|27157603 GCAGCT 6mer2-7 dme-miR-980-3p 3R + 27157434 27157478 3'utr Men-b FlyBase G34827.1 TTATTAACGCAATTAAGCAGCTTTGTTATAATTTATTGTTAAAAG 6 27157456 0.976406744 5 5 41 1 0.84509804 0.428571429 0.4 0.571428571 5 0 0 7 3R:27157434-27157478 6 7 783 FBgn0029155 3172.966667 116.5433333 178.2166667 0.002206137 0.060063496 0.039278032 -7 -6 -6.5 0.5 dme-miR-8-3p 7mer-m8 CAGTATT 3R 27242531 27242537 - 3R_27242531_27242537_- 0.635879303 0.649566563 0.642722933 0.009678383 CG18766 FBtr0333327|FBtr0085122|FBtr0085123 27242333|27242333|27242333 27242709|27242709|27242709 3R - 27242490 27242549 3'utr CG18766 FlyBase G55085.2 ACACACGGCATACAGTATTTTTTGTATAGTTAAAATATACATTGGAGTTTTAGTTCTCGA 58 27242539 0.907122899 11 53 523 0.925373134 1.315270435 0 0.155172414 0.268656716 58 3 2 62 3R:27242490-27242549 7 CG18766 FBtr0085123|FBtr0085122|FBtr0333327 27242333|27242333|27242333 27242709|27242709|27242709 CAGTATT 7mer-m8 dme-miR-8-3p 3R - 27242476 27242548 3'utr CG18766 FlyBase G41587.1 CACACGGCATACAGTATTTTTTGTATAGTTAAAATATACATTGGAGTTTTAGTTCTCGACGATCGCGCCCTCG 27 27242529 0.990119859 7 25 250 0.925 1.568201724 0.05 0.333333333 0.55 27 3 0 37 3R:27242476-27242548 7 36 784 FBgn0042111 927.4033333 71.10333333 109.1233333 0.038818062 0.506305377 0.329901946 2 -8 -3 0.5 dme-miR-970-3p 6mer3-8 TCTTAT 3R 27256336 27256341 + 3R_27256336_27256341_+ 0.547137994 0.494621425 0.520879709 0.037134844 TfIIA-L FBtr0085156|FBtr0085155|FBtr0085154 27256140|27256140|27256140 27256463|27256463|27256463 3R + 27256314 27256423 3'utr TfIIA-L FlyBase G46196.1 ACGTACTCGGGCCGACACTGTATCTTATTTTAGTTCCATCTGTTTTGTATTACGATAGCTTAAGGGTGTGTTGCAACCAACCATCTCGATTAAATGTATTAGAGTGCCGC 19 27256336 0.982208629 10 18 141 1 1.322219295 0.238095238 0.105263158 0.19047619 19 0 0 21 3R:27256314-27256423 6 TfIIA-L FBtr0085154|FBtr0085155|FBtr0085156 27256140|27256140|27256140 27256463|27256463|27256463 TCTTAT 6mer3-8 dme-miR-970-3p 3R + 27256310 27256346 3'utr TfIIA-L FlyBase G34842.1 AGCAACGTACTCGGGCCGACACTGTATCTTATTTTAG 9 27256333 0.783779911 6 9 56 1 1.255272505 0.166666667 0.333333333 0.666666667 9 0 0 18 3R:27256310-27256346 6 8.5 785 FBgn0011289 653.3333333 54.7 83.7 0.013010204 0.155393053 0.101553166 0 3 1.5 0.5 dme-miR-1003-3p 6mer2-7 TGTGAG 3R 27598556 27598561 - 3R_27598556_27598561_- 0.494210338 0.393798869 0.444004603 0.071001582 dsd FBtr0335247|FBtr0301390 27597561|27597759 27599034|27599034 3R - 27598509 27598575 3'utr dsd FlyBase G55226.1 ATTTATGCAAATTTTGTGAGCTGCCCCGGCAGCAGTTGCACCATATGCCGCGACAGAAACAGAGTTA 35 27598562 0.976797909 6 33 211 0.928571429 1.290034611 0.238095238 0.2 0.333333333 35 2 1 39 3R:27598509-27598575 6 dsd FBtr0335247|FBtr0301390 27597561|27597759 27599034|27599034 TGTGAG 6mer2-7 dme-miR-1003-3p 3R - 27598538 27598572 3'utr dsd FlyBase G41689.1 TATGCAAATTTTGTGAGCTGCCCCGGCAGCAGTTG 15 27598562 0.580762985 4 12 94 0.826086957 0.801632346 0.086956522 0.533333333 0.695652174 15 2 2 19 3R:27598538-27598572 6 24 786 FBgn0039528 2636.286667 54.87666667 84.28333333 0.009103714 0.437344348 0.284753807 1 1 1 0.5 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 27639105 27639112 + 3R_27639105_27639112_+ 0.59099027 0.561887254 0.576438762 0.020578929 Mtl FBtr0085192|FBtr0085193 27638699|27638699 27639871|27639871 3R + 27639078 27639156 3'utr Mtl FlyBase G46263.1 AAATCTAATGCACTACATATGTAGAAATCTAGTCAATTGAATCGAATGTATTGTACGAATAGTATCTGGCAGAAAGAGA 45 27639105 0.984277687 10 42 334 0.928571429 1.113943352 0.517857143 0.155555556 0.321428571 45 1 3 52 3R:27639078-27639156 8 Mtl FBtr0085193|FBtr0085192 27638699|27638699 27639871|27639871 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 27639078 27639153 3'utr Mtl FlyBase G34904.1 AAATCTAATGCACTACATATGTAGAAATCTAGTCAATTGAATCGAATGTATTGTACGAATAGTATCTGGCAGAAAG 48 27639114 0.985072996 10 42 334 0.902777778 1.511883361 0.430555556 0.416666667 0.611111111 48 6 1 65 3R:27639078-27639153 8 44 787 FBgn0039532 1160.21 67.97 104.5233333 0.037924169 0.647344417 0.420958638 0 -9 -4.5 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 27696484 27696491 + 3R_27696484_27696491_+ 0.565770809 0.556097058 0.560933934 0.006840339 CG43320 FBtr0306924|FBtr0306924|FBtr0306924 27696450|27696450|27696450 27696531|27696531|27696531 3R + 27696460 27696503 3'utr CG43320 FlyBase G46282.1 ACGTGTCTAGGGTAAGAACGTTTACTGTGATACGTGATAATAAT 61 27696481 0.756387817 6 60 503 0.985294118 1.826074803 0.455882353 0.114754098 0.205882353 61 1 0 67 3R:27696460-27696503 8 CG43320 FBtr0306924|FBtr0306924|FBtr0306924 27696450|27696450|27696450 27696531|27696531|27696531 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 27696459 27696500 3'utr CG43320 FlyBase G34922.1 CACGTGTCTAGGGTAAGAACGTTTACTGTGATACGTGATAAT 39 27696481 0.761456478 4 38 315 0.98245614 1.748188027 0.596491228 0.333333333 0.543859649 39 1 0 56 3R:27696459-27696500 8 50 788 FBgn0263025 42.64 4.076666667 6.266666667 1.17260788 12.26492232 7.978723404 3 3 3 0.5 dme-miR-276a-3p 7mer-A1 GTTCCTA 3R 28520850 28520856 - 3R_28520850_28520856_- 0.434071281 0.464272005 0.449171643 0.02135512 Ppn FBtr0301837|FBtr0300337|FBtr0301839|FBtr0301838 28520663|28520663|28520663|28520663 28521128|28521128|28521128|28521128 3R - 28520835 28520912 3'utr Ppn FlyBase G55383.1 AGTATTTTACTCTCTTCCAGGACAAAAGCAAATAGTATTAGTGATTTTATGTTTGTGTTCCTATTTATTCTTGATAAC 13 28520859 0.91937244 10 12 151 0.9375 1.176091259 0.3125 0.230769231 0.375 13 1 0 15 3R:28520835-28520912 7 Ppn FBtr0301839|FBtr0301838|FBtr0301837|FBtr0300337 28520663|28520663|28520663|28520663 28521128|28521128|28521128|28521128 GTTCCTA 7mer-A1 dme-miR-276a-3p 3R - 28520823 28520889 3'utr Ppn FlyBase G41808.1 AAAAGCAAATAGTATTAGTGATTTTATGTTTGTGTTCCTATTTATTCTTGATAACGAGTAACCTTAA 9 28520859 0.990984146 7 8 83 0.909090909 1 0.090909091 0.111111111 0.272727273 9 1 0 10 3R:28520823-28520889 7 6 789 FBgn0003137 888.9833333 12.49 19.08666667 0.006749283 0.480384307 0.314355571 3 3 3 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 28609248 28609254 - 3R_28609248_28609254_- 0.614377452 0.692983535 0.653680494 0.055582836 CG10011 FBtr0085319|FBtr0085319|FBtr0085319 28607937|28607937|28607937 28609394|28609394|28609394 3R - 28609241 28609283 3'utr CG10011 FlyBase G55402.1 TTAGTACTTTTCAGAAAGTATTTGTTTTTTGTGATAGTTTCAA 13 28609255 0.707454133 3 11 173 0.947368421 1.255272505 0.210526316 0.307692308 0.526315789 13 1 0 18 3R:28609241-28609283 7 CG10011 FBtr0085319|FBtr0085319|FBtr0085319 28607937|28607937|28607937 28609394|28609394|28609394 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 28609241 28609270 3'utr CG10011 FlyBase G41818.1 GAAAGTATTTGTTTTTTGTGATAGTTTCAA 5 28609255 0.666793151 3 5 64 1 0.84509804 0.571428571 0.4 0.571428571 5 0 0 7 3R:28609241-28609270 7 8.5 790 FBgn0039590 962.0733333 13.5 20.90333333 0.008835085 0.62962963 0.406633711 1 1 1 0.5 dme-miR-308-3p 8mer-m1 CTGTGATT 3R 28695565 28695572 + 3R_28695565_28695572_+ 0.370433245 0.314438089 0.342435667 0.039594515 CG9990 FBtr0085309|FBtr0305087|FBtr0336787|FBtr0303343|FBtr0305088|FBtr0085308 28695157|28695157|28695157|28695157|28695157|28695157 28695939|28695939|28695939|28695939|28695939|28695939 3R + 28695543 28695578 3'utr CG9990 FlyBase G46413.1 AATTTTATATATTTTCAATGGACTGTGATTGTTTTT 15 28695561 0.736746895 5 14 159 0.95 1.278753601 0.05 0.266666667 0.45 15 1 0 19 3R:28695543-28695578 8 CG9990 FBtr0305088|FBtr0085308|FBtr0336787|FBtr0303343|FBtr0085309|FBtr0305087 28695157|28695157|28695157|28695157|28695157|28695157 28695939|28695939|28695939|28695939|28695939|28695939 CTGTGATT 8mer-m1 dme-miR-308-3p 3R + 28695548 28695583 3'utr CG9990 FlyBase G35026.1 TATATATTTTCAATGGACTGTGATTGTTTTTTCTAC 13 28695560 0.745503027 6 13 126 1 1.230448921 0.352941176 0.230769231 0.411764706 13 0 0 17 3R:28695548-28695583 8 14 791 FBgn0039594 1 0.036666667 0.056666667 14 381.8181818 247.0588235 4 5 4.5 0.5 "dme-miR-995-3p,dme-miR-998-3p" 6mer3-8 TGGTGC 3R 28869775 28869780 + 3R_28869775_28869780_+ 0.557550853 0.452275677 0.504913265 0.074440808 spg FBtr0330304|FBtr0336766 28869617|28869062 28870439|28870439 3R + 28869755 28869838 3'utr spg FlyBase G46479.1 ATTTTTACTCAAATTATTTTTGGTGCCAAATTTTTGCTGCAAGTCCAAAGCGCAATATAAACAAATGTTGTAATGATATAGGTT 15 28869775 0.976788254 8 15 132 1 1.204119983 0.125 0.066666667 0.125 15 0 0 16 3R:28869755-28869838 6 spg FBtr0336766|FBtr0330304 28869062|28869617 28870439|28870439 TGGTGC 6mer3-8 "dme-miR-995-3p,dme-miR-998-3p" 3R + 28869765 28869793 3'utr spg FlyBase G35070.1 AAATTATTTTTGGTGCCAAATTTTTGCTG 10 28869774 0.71298109 2 10 95 1 1.204119983 0.3125 0.5 0.6875 10 0 0 16 3R:28869765-28869793 6 9.5 792 FBgn0264324 552.3333333 8.306666667 12.79 0.017199759 1.143659711 0.742767787 0 1 0.5 0.5 dme-miR-33-5p 7mer-m8 CAATGCA 3R 28870069 28870075 + 3R_28870069_28870075_+ 0.559127529 0.537359397 0.548243463 0.015392371 spg FBtr0330304|FBtr0336766 28869617|28869062 28870439|28870439 3R + 28869996 28870099 3'utr spg FlyBase G46481.1 TCAGAACGCTAATCAAAAACGATCAACGCAAAATATATACACTGAAAACAAAGCAGGACACCGACAAAATGTGCAATGCAGTTTTTACTTTAACGAATATAGCC 22 28870067 0.950259749 7 19 90 0.875 1.021189299 0.125 0.090909091 0.166666667 22 2 1 21 3R:28869996-28870099 7 spg FBtr0336766|FBtr0330304 28869062|28869617 28870439|28870439 CAATGCA 7mer-m8 dme-miR-33-5p 3R + 28870046 28870081 3'utr spg FlyBase G35072.1 AAGCAGGACACCGACAAAATGTGCAATGCAGTTTTT 9 28870066 0.906629325 4 8 26 0.846153846 1.041392685 0.538461538 0.333333333 0.538461538 9 2 0 11 3R:28870046-28870081 7 11.5 793 FBgn0264324 552.3333333 8.306666667 12.79 0.02082076 1.384430177 0.899139953 2 3 2.5 0.5 dme-miR-318-3p 7mer-m8 CCCAGTG 3R 29046697 29046703 + 3R_29046697_29046703_+ 0.578873345 0.576885842 0.577879594 0.001405375 Pkc98E FBtr0085359|FBtr0339149|FBtr0339150|FBtr0301516 29046223|29046223|29046223|29046223 29049148|29047034|29047034|29047034 3R + 29046657 29046718 3'utr Pkc98E FlyBase G46554.1 AAGAAAGAAGGAAGAGATACCCCCACCCATCTAGTCAATGCCCAGTGGCTGAGTGCATTTTG 85 29046686 0.958026863 8 78 359 0.928571429 1.959041392 0.224489796 0.141176471 0.255102041 85 7 0 91 3R:29046657-29046718 7 Pkc98E FBtr0339150|FBtr0301516|FBtr0085359|FBtr0339149 29046223|29046223|29046223|29046223 29047034|29047034|29049148|29047034 CCCAGTG 7mer-m8 dme-miR-318-3p 3R + 29046660 29046729 3'utr Pkc98E FlyBase G35122.1 AAAGAAGGAAGAGATACCCCCACCCATCTAGTCAATGCCCAGTGGCTGAGTGCATTTTGTTATTAGTTAT 61 29046686 0.929056765 9 55 287 0.925531915 1.638489257 0.329787234 0.393442623 0.606382979 61 6 1 87 3R:29046660-29046729 7 58 794 FBgn0003093 985.62 22.17 34.02333333 0.058846208 2.616147948 1.704712452 11 11 11 0.5 dme-miR-8-3p 7mer-A1 AGTATTA 3R 29046965 29046971 + 3R_29046965_29046971_+ 0.809348149 0.814561752 0.81195495 0.003686643 Pkc98E FBtr0085359|FBtr0339149|FBtr0339150|FBtr0301516 29046223|29046223|29046223|29046223 29049148|29047034|29047034|29047034 3R + 29046945 29046992 3'utr Pkc98E FlyBase G46555.1 CTTGCACAACTTCCTTCTCAAGTATTAAAGCGATATTATTTTAAAGTT 12 29046961 0.908393151 7 8 103 0.769230769 0.698970004 0.307692308 0.083333333 0.153846154 12 2 1 10 3R:29046945-29046992 7 Pkc98E FBtr0339150|FBtr0301516|FBtr0085359|FBtr0339149 29046223|29046223|29046223|29046223 29047034|29047034|29049148|29047034 AGTATTA 7mer-A1 dme-miR-8-3p 3R + 29046894 29047002 3'utr Pkc98E FlyBase G35123.1 AATACATGCGACCACACGGATCTAGTTTCATTTGTTTTACATATTCGAAATCTTGCACAACTTCCTTCTCAAGTATTAAAGCGATATTATTTTAAAGTTACCTTATTGT 15 29046961 0.992828398 11 13 141 0.826086957 1.278753601 0.086956522 0.4 0.608695652 15 4 0 19 3R:29046894-29047002 7 8 795 FBgn0003093 985.62 22.17 34.02333333 0.008116718 0.360847993 0.235132752 4 4 4 0.5 dme-miR-305-5p 7mer-m1 GTACAAT 3R 29050677 29050683 + 3R_29050677_29050683_+ 0.754473804 0.763480844 0.758977324 0.006368911 CG11837 FBtr0085360 29050645 29050721 3R + 29050662 29050693 3'utr CG11837 FlyBase G46562.1 AGATCGTTAAACTTTGTACAATTTACCAACAT 8 29050675 0.626237893 4 8 70 1 0.903089987 0 0 0 8 0 0 8 3R:29050662-29050693 7 CG11837 FBtr0085360 29050645 29050721 GTACAAT 7mer-m1 dme-miR-305-5p 3R + 29050657 29050694 3'utr CG11837 FlyBase G35126.1 TCTATAGATCGTTAAACTTTGTACAATTTACCAACATT 9 29050683 0.596077959 4 9 72 1 1.113943352 0 0.333333333 0.538461538 9 0 0 13 3R:29050657-29050694 7 8 796 FBgn0039627 323 36.6 56.57333333 0.024767802 0.218579235 0.14140938 2 -6 -2 0.5 dme-miR-980-3p 6mer3-8 GGCAGC 3R 29059718 29059723 - 3R_29059718_29059723_- 0.723656189 0.815737392 0.76969679 0.065111241 Cul5 FBtr0085417 29059270 29059952 3R - 29059680 29059744 3'utr Cul5 FlyBase G55498.1 TAAAAGACCCACACTCCAATCGGCAGCCATTTTCTCGTGTCCACGTCCTGTATTTGTGAAACTTT 43 29059725 0.931828011 7 42 222 0.980769231 1.707570176 0.096153846 0.186046512 0.326923077 43 1 0 51 3R:29059680-29059744 6 Cul5 FBtr0085417 29059270 29059952 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 29059710 29059744 3'utr Cul5 FlyBase G41879.2 TAAAAGACCCACACTCCAATCGGCAGCCATTTTCT 15 29059725 0.966945703 3 13 62 0.952380952 1.301029996 0.047619048 0.266666667 0.476190476 15 1 0 20 3R:29059710-29059744 6 27 797 FBgn0039632 438.4633333 15.78333333 23.95 0.061578695 1.710665259 1.127348643 2 2 2 0.5 dme-miR-277-3p 8mer-A1 TGCATTTA 3R 29145582 29145589 + 3R_29145582_29145589_+ 0.558312611 0.437998884 0.498155748 0.085074633 CG14516 FBtr0085383|FBtr0085382|FBtr0335406 29145497|29145497|29145497 29145787|29145787|29145787 3R + 29145540 29145594 3'utr CG14516 FlyBase G46650.1 TATTAGATTTCGCAGCTGCAACTGCATGGGTTGGGCCACCAATGCATTTATGTGT 14 29145582 0.76462622 7 13 99 0.941176471 0.903089987 0.352941176 0.214285714 0.352941176 14 0 1 16 3R:29145540-29145594 8 CG14516 FBtr0335406|FBtr0085382|FBtr0085383 29145497|29145497|29145497 29145787|29145787|29145787 TGCATTTA 8mer-A1 dme-miR-277-3p 3R + 29145567 29145601 3'utr CG14516 FlyBase G35187.1 GGGTTGGGCCACCAATGCATTTATGTGTAATATTT 6 29145587 0.736312023 4 6 42 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3R:29145567-29145601 8 8.5 798 FBgn0039640 168.03 5.77 8.72 0.050586205 1.473136915 0.974770642 0 -5 -2.5 0.5 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 29145737 29145744 + 3R_29145737_29145744_+ 0.499596638 0.400256798 0.449926718 0.070243846 CG14516 FBtr0085383|FBtr0085382|FBtr0335406 29145497|29145497|29145497 29145787|29145787|29145787 3R + 29145634 29145791 3'utr CG14516 FlyBase G46651.2 AAGAGAGAAAGCCCTTGGCAGATCGTCCAGAGCATCACGTTTTTCATTACTTTTAATGTATGCCTTCTTTTCATAACAATTATGAGTCTTGTAATTTTAATTTGTACTTAAATGTAATTGTAAATGTAAATGGAATTATAACATTGTTCGTCACAAAA 53 29145716 0.990092391 22 51 496 0.967213115 1.770852012 0.245901639 0.132075472 0.245901639 53 2 0 59 3R:29145634-29145791 8 CG14516 FBtr0335406|FBtr0085382|FBtr0085383 29145497|29145497|29145497 29145787|29145787|29145787 GTACTTAA 8mer-A1 dme-miR-252-5p 3R + 29145704 29145760 3'utr CG14516 FlyBase G35188.1 TCATAACAATTATGAGTCTTGTAATTTTAATTTGTACTTAAATGTAATTGTAAATGT 11 29145716 0.790802347 5 10 117 0.928571429 1.113943352 0.142857143 0.272727273 0.428571429 11 1 0 13 3R:29145704-29145760 8 13.5 799 FBgn0039640 168.03 5.77 8.72 0.080342796 2.339688042 1.548165138 21 21 21 0.5 dme-miR-304-5p 7mer-m8 TGAGATT 3R 29221864 29221870 + 3R_29221864_29221870_+ 0.383335109 0.399440238 0.391387673 0.011388025 Ef1gamma FBtr0085393|FBtr0085392|FBtr0302442 29221775|29221775|29221775 29222109|29222109|29222109 3R + 29221745 29222006 stop_codon Ef1gamma FlyBase G46701.1 GCAAGTTCAACCAGGGCAAGATCTTCAAGTAATCATCTCTGCCTAGCCCAGCTCCGCTCAAAGCAGCAGCCGCCCTCATTTAGACCAACAACAACAACAGCAGCAGTAACAATAAAGTTTGAGATTTAAAATGCAGGAAGAGCACAATGCCCATTTCTTAAGTTCCAACTGATAAGTACACTAAAGATATCCAATATCTGTCGTGCTGCCTCCCACGTTTGGCGGAATCGTGTGTCTCGCCTCCTGCATTTTGTACTGGAGA 65 29221863 0.975518867 26 57 360 0.871794872 1.054357662 0.205128205 0.169230769 0.307692308 65 5 5 68 3R:29221745-29222006 7 Ef1gamma FBtr0302442|FBtr0085392|FBtr0085393 29221775|29221775|29221775 29222109|29222109|29222109 TGAGATT 7mer-m8 dme-miR-304-5p 3R + 29221752 29221924 stop_codon Ef1gamma FlyBase G35225.1 CAACCAGGGCAAGATCTTCAAGTAATCATCTCTGCCTAGCCCAGCTCCGCTCAAAGCAGCAGCCGCCCTCATTTAGACCAACAACAACAACAGCAGCAGTAACAATAAAGTTTGAGATTTAAAATGCAGGAAGAGCACAATGCCCATTTCTTAAGTTCCAACTGATAAGTACA 32 29221863 0.97091587 13 29 168 0.954545455 1.62324929 0.295454545 0.375 0.545454545 32 2 0 42 3R:29221752-29221924 7 17 800 FBgn0029176 8118.963333 592.2866667 901.75 0.002093863 0.028702318 0.018852232 1 1 1 0.5 dme-miR-184-3p 7mer-m8 TCCGTCC 3R 29485121 29485127 + 3R_29485121_29485127_+ 0.385898617 0.600554545 0.493226581 0.151784643 Ptp99A FBtr0303148|FBtr0303454|FBtr0085422|FBtr0085424 29484488|29484488|29484488|29484488 29486704|29487131|29486704|29486704 3R + 29485107 29485145 5'utr Ptp99A FlyBase G46727.1 TCGAATCGATTCAGTCCGTCCTAGTATCTGTTATTCTTT 10 29485116 0.688481828 5 10 82 1 1.041392685 0.090909091 0.1 0.181818182 10 0 0 11 3R:29485107-29485145 7 Ptp99A FBtr0085422|FBtr0085424|FBtr0303148|FBtr0303454 29484488|29484488|29484488|29484488 29486704|29486704|29486704|29487131 TCCGTCC 7mer-m8 dme-miR-184-3p 3R + 29485106 29485142 5'utr Ptp99A FlyBase G35249.1 TTCGAATCGATTCAGTCCGTCCTAGTATCTGTTATTC 9 29485117 0.718774042 5 8 62 0.916666667 0.740362689 0.333333333 0.333333333 0.5 9 0 1 11 3R:29485106-29485142 7 9.5 801 FBgn0004369 285.67 6.166666667 9.486666667 0.033255155 1.540540541 1.001405481 5 4 4.5 0.5 dme-miR-33-5p 7mer-A1 AATGCAA 3R 29753170 29753176 + 3R_29753170_29753176_+ 0.68597997 0.625274525 0.655627248 0.042925271 yata FBtr0333822|FBtr0085477 29752956|29752956 29754528|29753328 3R + 29753116 29753202 3'utr yata FlyBase G46828.1 CATTTGGCCGCTCTGTGTGTGCTTTGTGTTTGTATTGGGTGCCAGTTTGCATTAAATGCAATCTCAGTGTCTCGAGCCTCCATTTCG 35 29753172 0.776217084 10 32 263 0.926829268 1.579783597 0.219512195 0.114285714 0.243902439 35 3 0 38 3R:29753116-29753202 7 yata FBtr0333822|FBtr0085477 29752956|29752956 29754528|29753328 AATGCAA 7mer-A1 dme-miR-33-5p 3R + 29753114 29753205 3'utr yata FlyBase G35323.1 CCCATTTGGCCGCTCTGTGTGTGCTTTGTGTTTGTATTGGGTGCCAGTTTGCATTAAATGCAATCTCAGTGTCTCGAGCCTCCATTTCGATT 23 29753183 0.979708004 14 23 185 1 1.505149978 0.25 0.304347826 0.5 23 0 0 32 3R:29753114-29753205 7 19.5 802 FBgn0260990 1641.69 44.94333333 68.84666667 0.011878004 0.4338797 0.283238114 -2 -13 -7.5 0.5 dme-miR-1006-3p 6mer2-7 GAATTT 3R 29753657 29753662 + 3R_29753657_29753662_+ 0.59348137 0.980752448 0.787116909 0.27384195 yata FBtr0333822 29752956 29754528 3R + 29753567 29753674 3'utr yata FlyBase G46832.1 GATGCCAATCCACGCGATTTTCGAGGGACAGTGAATATTTAGAAATCTAAACTAAACGTATTTTTGCGAATGGAGCGTAACCAAAATTGTGAATTTTAATACATAAAT 99 29753653 0.98167078 12 98 719 0.991935484 2.089905111 0.072580645 0.191919192 0.35483871 99 1 0 123 3R:29753567-29753674 6 yata FBtr0333822 29752956 29754528 GAATTT 6mer2-7 dme-miR-1006-3p 3R + 29753569 29753674 3'utr yata FlyBase G35327.1 TGCCAATCCACGCGATTTTCGAGGGACAGTGAATATTTAGAAATCTAAACTAAACGTATTTTTGCGAATGGAGCGTAACCAAAATTGTGAATTTTAATACATAAAT 64 29753653 0.981141553 10 64 470 1 2.008600172 0.049019608 0.453125 0.656862745 64 0 0 102 3R:29753569-29753674 6 71 803 FBgn0260990 1641.69 44.94333333 68.84666667 0.043248116 1.579767114 1.031277234 4 4 4 0.5 dme-miR-31a-5p 7mer-A1 CTTGCCA 3R 29801236 29801242 + 3R_29801236_29801242_+ 0.639876338 0.590045329 0.614960834 0.035235838 Drice FBtr0085482 29800916 29801584 3R + 29801185 29801364 3'utr Drice FlyBase G46872.1 TTAGAAATCTAAGAGGTTTTTACTCCGGCCAAAATTTTTTGACAATTTTAACTTGCCAACTGAACAAAGACGATCTCAAAATTTTAAATTCTCTACTAAACCTTATCATAGAACAACTTGCGCCTCTTTGATTCTCGATCAGGAATGTCGGCCCACCCTTATCTATATCTACCTTAGACC 203 29801245 0.899714444 33 181 1315 0.890688259 1.740362689 0.052631579 0.192118227 0.336032389 203 24 3 220 3R:29801185-29801364 7 Drice FBtr0085482 29800916 29801584 CTTGCCA 7mer-A1 dme-miR-31a-5p 3R + 29801187 29801348 3'utr Drice FlyBase G35371.1 AGAAATCTAAGAGGTTTTTACTCCGGCCAAAATTTTTTGACAATTTTAACTTGCCAACTGAACAAAGACGATCTCAAAATTTTAAATTCTCTACTAAACCTTATCATAGAACAACTTGCGCCTCTTTGATTCTCGATCAGGAATGTCGGCCCACCCTTATCT 171 29801245 0.843688429 31 151 1063 0.891050584 1.514737442 0.038910506 0.374269006 0.583657588 171 22 6 229 3R:29801187-29801348 7 52 804 FBgn0019972 801.2566667 50.41666667 76.82666667 0.064898056 1.031404959 0.676848317 -9 -9 -9 0.5 dme-miR-33-5p 7mer-m1 AATGCAC 3R 29801526 29801532 + 3R_29801526_29801532_+ 0.822362039 0.751568156 0.786965097 0.050058776 Drice FBtr0085482 29800916 29801584 3R + 29801494 29801580 3'utr Drice FlyBase G46874.1 ATACTATTTCTATGCCATTTGTACTCTTATATAATGCACATTAGCAAATGTTCTCCTTTCAAGTTAACCGCTAATAAATCCGATTGA 17 29801542 0.987907305 11 17 153 1 1.342422681 0 0.235294118 0.409090909 17 0 0 22 3R:29801494-29801580 7 Drice FBtr0085482 29800916 29801584 AATGCAC 7mer-m1 dme-miR-33-5p 3R + 29801528 29801581 3'utr Drice FlyBase G35374.1 TGCACATTAGCAAATGTTCTCCTTTCAAGTTAACCGCTAATAAATCCGATTGAA 6 29801542 0.979483929 5 6 41 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 3R:29801528-29801581 4 3 805 FBgn0019972 801.2566667 50.41666667 76.82666667 0.003744119 0.059504132 0.039048941 -16 -16 -16 0.5 dme-bantam-3p 6mer3-8 TGATCT 3R 29902981 29902986 + 3R_29902981_29902986_+ 0.87361288 0.721084531 0.797348705 0.107853866 CG31038 FBtr0085494|FBtr0333274|FBtr0333275|FBtr0085497|FBtr0085498 29902590|29902590|29902590|29902590|29902590 29903231|29903231|29903231|29903231|29903231 3R + 29902953 29903000 3'utr CG31038 FlyBase G46952.1 ACCAGCCTCTGTGGTTAGGAGTCCTTTGTGATCTTCAGTTGTAAGTTT 14 29902986 0.961245604 5 11 140 0.785714286 0.740362689 0.285714286 0 0 14 2 1 11 3R:29902953-29903000 6 CG31038 FBtr0085494|FBtr0085498|FBtr0085497|FBtr0333275|FBtr0333274 29902590|29902590|29902590|29902590|29902590 29903231|29903231|29903231|29903231|29903231 TGATCT 6mer3-8 dme-bantam-3p 3R + 29902955 29903000 3'utr CG31038 FlyBase G35432.1 CAGCCTCTGTGGTTAGGAGTCCTTTGTGATCTTCAGTTGTAAGTTT 13 29902978 0.659194469 4 13 151 1 1.301029996 0.1 0.384615385 0.6 13 0 0 20 3R:29902955-29903000 6 13 806 FBgn0051038 142.6666667 4.59 7.016666667 0.091121495 2.832244009 1.852731591 -5 3 -1 0.5 dme-miR-12-5p 7mer-A1 ATACTCA 3R 30213387 30213393 - 3R_30213387_30213393_- 0.769423979 0.816584824 0.793004401 0.033347721 CecB FBtr0085640 30213313 30213475 3R - 30213368 30213404 3'utr CecB FlyBase G55877.1 AATGAAAATAGATACTCAATGCCAATGTCAAATTATT 8 30213385 0.946256182 4 8 34 1 1.146128036 0.071428571 0.375 0.642857143 8 0 0 14 3R:30213368-30213404 7 CecB FBtr0085640 30213313 30213475 ATACTCA 7mer-A1 dme-miR-12-5p 3R - 30213366 30213404 3'utr CecB FlyBase G42159.1 AATGAAAATAGATACTCAATGCCAATGTCAAATTATTAA 11 30213396 0.891514199 4 11 55 1 1.176091259 0 0.272727273 0.466666667 11 0 0 15 3R:30213366-30213404 7 9.5 807 FBgn0000278 26.33333333 8.696666667 13.18 0.360759494 1.092372557 0.720789074 -8 3 -2.5 0.5 dme-miR-277-3p 7mer-A1 GCATTTA 3R 30364756 30364762 + 3R_30364756_30364762_+ 0.820321429 0.818795698 0.819558564 0.001078833 hdc FBtr0330311 30360539 30372382 3R + 30364673 30364803 3'utr hdc FlyBase G47106.1 AAGTACATACCCTATACCATATACCCTATACCGTATAAAACGTACACCTAACTAACCTAAATTGATAGAAACTACACTTTTTGGCATTTACTTGAGAGGATTATATATAAGTTTGGCACAGTTATATATAA 68 30364759 0.976689973 16 59 624 0.85 1.531478917 0.2875 0.132352941 0.2625 68 11 1 68 3R:30364673-30364803 7 hdc FBtr0330311 30360539 30372382 GCATTTA 7mer-A1 dme-miR-277-3p 3R + 30364705 30364785 3'utr hdc FlyBase G35537.1 GTATAAAACGTACACCTAACTAACCTAAATTGATAGAAACTACACTTTTTGGCATTTACTTGAGAGGATTATATATAAGTT 30 30364760 0.994444207 11 20 263 0.708333333 1.054357662 0.291666667 0.566666667 0.729166667 30 12 2 34 3R:30364705-30364785 7 34.5 808 FBgn0010113 3260.306667 58.23333333 89.73 0.010581827 0.59244419 0.384486794 -3 -4 -3.5 0.5 dme-miR-283-5p 8mer-m1 TGATATTT 3R 30368998 30369005 + 3R_30368998_30369005_+ 0.442457791 0.332467761 0.387462776 0.077774675 hdc FBtr0330311 30360539 30372382 3R + 30368980 30369017 3'utr hdc FlyBase G47119.1 AAAGAGCTCCCCGATATGTGATATTTAATTGGTAATTG 14 30368994 0.800616335 4 14 110 1 1.230448921 0.058823529 0.214285714 0.352941176 14 0 0 17 3R:30368980-30369017 8 hdc FBtr0330311 30360539 30372382 TGATATTT 8mer-m1 dme-miR-283-5p 3R + 30368982 30369005 3'utr hdc FlyBase G35546.1 AGAGCTCCCCGATATGTGATATTT 5 30368994 0.81224685 2 5 35 1 0.84509804 0 0.4 0.571428571 5 0 0 7 3R:30368982-30369005 8 9.5 809 FBgn0010113 3260.306667 58.23333333 89.73 0.002913836 0.163136806 0.105873175 4 4 4 0.5 dme-miR-308-3p 7mer-m1 TGTGATT 3R 30456795 30456801 - 3R_30456795_30456801_- 0.378309983 0.41872758 0.398518781 0.028579559 CG2224 FBtr0331358 30456439 30457058 3R - 30456787 30456852 3'utr CG2224 FlyBase G55921.1 TTGCGTTCCGGCCTCTTGGTTCGTTGCATTCTTTCACTTAAGAACCTCTAATGTGATTTTCAATTG 37 30456795 0.826107322 10 37 283 1 1.73239376 0.111111111 0.378378378 0.574074074 37 0 0 54 3R:30456787-30456852 7 CG2224 FBtr0331358 30456439 30457058 TGTGATT 7mer-m1 dme-miR-308-3p 3R - 30456765 30456857 3'utr CG2224 FlyBase G42194.1 GTTTATTGCGTTCCGGCCTCTTGGTTCGTTGCATTCTTTCACTTAAGAACCTCTAATGTGATTTTCAATTGTGGCTTACCCTTGCGTTCGTTA 31 30456795 0.98484663 13 29 239 0.875 1.243038049 0.15 0.225806452 0.4 31 4 1 35 3R:30456765-30456857 7 28.5 810 FBgn0039773 322.3166667 18.33333333 28.13666667 0.088422359 1.554545455 1.012913162 -6 -6 -6 0.5 "dme-miR-1002-5p,dme-miR-252-5p" 7mer-A1 TACTTAA 3R 30788299 30788305 + 3R_30788299_30788305_+ 0.577012283 0.660585019 0.618798651 0.059094823 zfh1 FBtr0331180|FBtr0331180|FBtr0085701|FBtr0085701 30786658|30786658|30786202|30786202 30789202|30789202|30789202|30789202 3R + 30788263 30788373 3'utr zfh1 FlyBase G47237.1 CGAGAGGAAGAAAAACTCACAAAAAAATGCATTTAATACTTAATTAGTTTTTATATTCTTGTATTTTAACGAGGAGGAGGCCGATCGGCGGCGATATATATATATATATAT 61 30788295 0.985373517 15 50 420 0.847222222 1.484299839 0.125 0.163934426 0.291666667 61 10 1 61 3R:30788263-30788373 7 zfh1 FBtr0331180|FBtr0331180|FBtr0085701|FBtr0085701 30786658|30786658|30786202|30786202 30789202|30789202|30789202|30789202 TACTTAA 7mer-A1 "dme-miR-1002-5p,dme-miR-252-5p" 3R + 30788272 30788346 3'utr zfh1 FlyBase G35635.1 GAAAAACTCACAAAAAAATGCATTTAATACTTAATTAGTTTTTATATTCTTGTATTTTAACGAGGAGGAGGCCGA 20 30788293 0.985168379 9 17 134 0.954545455 1.322219295 0 0.157894737 0.272727273 19 1 0 21 3R:30788272-30788346 7 21 811 FBgn0004606 2785.276667 51.94333333 79.77333333 0.007539646 0.404286723 0.263245863 4 6 5 0.5 dme-miR-317-3p 8mer-A1 TGTGTTCA 3R 31055508 31055515 - 3R_31055508_31055515_- 0.629195584 0.472138246 0.550666915 0.111056353 dco FBtr0085743|FBtr0085742|FBtr0085744|FBtr0334548 31055184|31055184|31055184|31054083 31056528|31056528|31056528|31056528 3R - 31055502 31055540 3'utr dco FlyBase G55992.1 CTTTCGTGGTCTGCACTTTGCTGCCTGTGTTCATATATA 6 31055524 0.981246061 4 4 44 0.875 0.84509804 0.125 0.166666667 0.375 6 1 0 7 3R:31055502-31055540 8 dco FBtr0085744|FBtr0334548|FBtr0085743|FBtr0085742 31055184|31054083|31055184|31055184 31056528|31056528|31056528|31056528 TGTGTTCA 8mer-A1 dme-miR-317-3p 3R - 31055505 31055541 3'utr dco FlyBase G42254.1 ACTTTCGTGGTCTGCACTTTGCTGCCTGTGTTCATAT 7 31055525 0.755162635 4 5 55 0.75 0.77815125 0 0.142857143 0.25 7 2 0 6 3R:31055505-31055541 8 3.5 812 FBgn0002413 1939.763333 65.62333333 100.4966667 0.001804344 0.053334688 0.034827026 9 10 9.5 0.5 dme-miR-79-3p 8mer-A1 TAGCTTTA 3R 31055692 31055699 - 3R_31055692_31055699_- 0.42414517 0.607978343 0.516061757 0.129989632 dco FBtr0085743|FBtr0085742|FBtr0085744|FBtr0334548 31055184|31055184|31055184|31054083 31056528|31056528|31056528|31056528 3R - 31055624 31055748 3'utr dco FlyBase G55993.1 GTAACCTAAGTTGATGGTAAAATGATTGCGATTACCACGTGCAGTTCTCTAGCTTTAAGCAACGCTCTGACTTATAAGGCCCTCCTATGTTATATTATGTAACCTTCTGTACCGCCTACTCCCCT 59 31055709 0.90956727 18 53 479 0.910447761 1.30820858 0.313432836 0.101694915 0.208955224 59 4 2 61 3R:31055624-31055748 8 dco FBtr0085744|FBtr0334548|FBtr0085743|FBtr0085742 31055184|31054083|31055184|31055184 31056528|31056528|31056528|31056528 TAGCTTTA 8mer-A1 dme-miR-79-3p 3R - 31055658 31055813 3'utr dco FlyBase G42255.1 AGGCTCTAGCTCTAGCGAATCCAATCCATACAAAAGCATATGCCACACAGCAAGGCACCCACATTGTAACCTAAGTTGATGGTAAAATGATTGCGATTACCACGTGCAGTTCTCTAGCTTTAAGCAACGCTCTGACTTATAAGGCCCTCCTATGTT 35 31055709 0.981664305 15 32 233 0.964285714 1.255272505 0.285714286 0.485714286 0.678571429 35 0 2 54 3R:31055658-31055813 8 32 813 FBgn0002413 1939.763333 65.62333333 100.4966667 0.016496858 0.487631432 0.318418521 10 10 10 0.5 dme-miR-14-3p 7mer-m8 AAGACTG 3R 31230801 31230807 + 3R_31230801_31230807_+ 0.621997043 0.586636065 0.604316554 0.025003932 CG12054 FBtr0335408 31229123 31231259 3R + 31230775 31230831 3'utr CG12054 FlyBase G47303.1 AATAAAATGAGTATGTCATCTTATATAAGACTGCTGTTATGTTCGTAAATATATTTA 90 31230799 0.703281641 9 84 844 0.904761905 1.977723605 0.142857143 0.144444444 0.266666667 90 10 0 95 3R:31230775-31230831 7 CG12054 FBtr0335408 31229123 31231259 AAGACTG 7mer-m8 dme-miR-14-3p 3R + 31230777 31230830 3'utr CG12054 FlyBase G35684.1 TAAAATGAGTATGTCATCTTATATAAGACTGCTGTTATGTTCGTAAATATATTT 75 31230799 0.701161977 9 61 664 0.836538462 1.939519253 0.115384615 0.293333333 0.490384615 75 17 0 87 3R:31230777-31230830 7 80 814 FBgn0039831 3333.656667 103.7033333 158.5733333 0.023997672 0.771431327 0.504498444 2 2 2 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 3R 31231220 31231225 + 3R_31231220_31231225_+ 0.588281104 0.659483793 0.623882449 0.050347912 CG12054 FBtr0335408|FBtr0335408|FBtr0335408 31229123|31229123|31229123 31231259|31231259|31231259 3R + 31231202 31231239 3'utr CG12054 FlyBase G47305.1 TATTCTCTTTTTGCTTTATGTGATCTATTACATACTAC 23 31231221 0.684373941 7 22 271 0.965517241 1.146128036 0 0.173913043 0.344827586 23 0 1 28 3R:31231202-31231239 6 CG12054 FBtr0335408|FBtr0335408|FBtr0335408 31229123|31229123|31229123 31231259|31231259|31231259 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 31231192 31231239 3'utr CG12054 FlyBase G35686.1 AGTAGTAAAATATTCTCTTTTTGCTTTATGTGATCTATTACATACTAC 14 31231218 0.899099265 10 13 160 0.958333333 1.361727836 0 0.5 0.708333333 14 1 0 23 3R:31231192-31231239 6 17.5 815 FBgn0039831 3333.656667 103.7033333 158.5733333 0.005249491 0.168750603 0.110359035 -1 2 0.5 0.5 dme-miR-1002-5p 8mer-A1 CTACTTAA 3R 31401470 31401477 + 3R_31401470_31401477_+ 0.564394099 0.607312145 0.585853122 0.030347609 Gcn2 FBtr0334552|FBtr0085787|FBtr0334551 31401376|31401376|31401376 31401560|31402013|31401560 3R + 31401416 31401501 3'utr Gcn2 FlyBase G47330.1 AGACCAGCCAGTAGTGTAAGCTCGAAAGTGTCACAAATTATTTTCGCCGAAATTCTACTTAACTGGCTGCCCTCCGTGCCATTAAC 11 31401487 0.945997837 8 11 66 1 1.113943352 0.076923077 0.090909091 0.230769231 11 0 0 13 3R:31401416-31401501 8 Gcn2 FBtr0334552|FBtr0085787|FBtr0334551 31401376|31401376|31401376 31401560|31402013|31401560 CTACTTAA 8mer-A1 dme-miR-1002-5p 3R + 31401458 31401496 3'utr Gcn2 FlyBase G35701.1 TTCGCCGAAATTCTACTTAACTGGCTGCCCTCCGTGCCA 8 31401468 0.953398027 5 6 50 0.642857143 0.954242509 0.285714286 0.625 0.785714286 8 5 0 9 3R:31401458-31401496 8 7 816 FBgn0019990 1106.633333 23.54666667 35.94666667 0.006325492 0.297281993 0.194732938 -17 2 -7.5 0.5 dme-miR-1003-3p 8mer-A1 ATGTGAGA 3R 31575989 31575996 - 3R_31575989_31575996_- 0.547046222 0.536014708 0.541530465 0.007800448 pygo FBtr0085806 31575833 31576891 3R - 31575922 31576012 3'utr pygo FlyBase G56037.1 AAGAAATTATGAATTCATGTGAGAAAGGTTAATTTGTAATTTAAGACGAATGTGGAGGACGCAGCGAACATAAACGATTCAAACGAGAAAA 25 31575999 0.951748212 6 22 141 0.888888889 1.380211242 0.37037037 0.08 0.148148148 25 3 0 24 3R:31575922-31576012 8 pygo FBtr0085806 31575833 31576891 ATGTGAGA 8mer-A1 dme-miR-1003-3p 3R - 31575942 31576012 3'utr pygo FlyBase G42287.1 AAGAAATTATGAATTCATGTGAGAAAGGTTAATTTGTAATTTAAGACGAATGTGGAGGACGCAGCGAACAT 13 31575999 0.973276884 3 13 84 1 1.278753601 0.263157895 0.384615385 0.578947368 13 0 0 19 3R:31575942-31576012 8 14.5 817 FBgn0043900 862.0266667 23.10666667 35.35666667 0.016820825 0.627524524 0.410106533 3 3 3 0.5 dme-miR-980-3p 8mer-A1 GGCAGCTA 3R 31576686 31576693 - 3R_31576686_31576693_- 0.604860294 0.411128913 0.507994604 0.136988787 pygo FBtr0085806 31575833 31576891 3R - 31576661 31576713 3'utr pygo FlyBase G56043.1 GACCCACCAGTCCCCATCCCGGCAGCTAAGCCCCGTAGCCAGAATGCGAACCA 16 31576698 0.835690792 5 16 35 1 1.230448921 0.058823529 0.0625 0.117647059 16 0 0 17 3R:31576661-31576713 8 pygo FBtr0085806 31575833 31576891 GGCAGCTA 8mer-A1 dme-miR-980-3p 3R - 31576672 31576709 3'utr pygo FlyBase G42290.1 CACCAGTCCCCATCCCGGCAGCTAAGCCCCGTAGCCAG 7 31576698 0.733471962 2 5 19 0.666666667 0.77815125 0 0.285714286 0.444444444 7 3 0 6 3R:31576672-31576709 8 11.5 818 FBgn0043900 862.0266667 23.10666667 35.35666667 0.013340655 0.497691864 0.325256906 5 5 5 0.5 dme-miR-1007-3p 8mer-A1 TGAGCTTA 3R 31596910 31596917 - 3R_31596910_31596917_- 0.570355218 0.569828785 0.570092002 0.000372221 CycG FBtr0333328 31596640 31599272 3R - 31596869 31597076 3'utr CycG FlyBase G56057.2 ATTTTACATTGTATTTAGCGCGGAGTTAGTTAAATATTTGCAAGTATCAACATCAAAAACATGAATGAAAATCTCAATTATTGTATATTTAGTTTTTATTTGACGACTACTTTTATTCATGATAACAATGATGGTGGGCAATTGCCCATCGTCAAGTTTTGAGCTTATATTCGGTTGAGGTTTACACTTTAGGATTAGTTACCACACG 224 31596917 0.867040235 34 214 2256 0.957198444 2.390935107 0.089494163 0.133928571 0.245136187 224 11 0 246 3R:31596869-31597076 8 CycG FBtr0333328 31596640 31599272 TGAGCTTA 8mer-A1 dme-miR-1007-3p 3R - 31596874 31597077 3'utr CycG FlyBase G42303.1 AATTTTACATTGTATTTAGCGCGGAGTTAGTTAAATATTTGCAAGTATCAACATCAAAAACATGAATGAAAATCTCAATTATTGTATATTTAGTTTTTATTTGACGACTACTTTTATTCATGATAACAATGATGGTGGGCAATTGCCCATCGTCAAGTTTTGAGCTTATATTCGGTTGAGGTTTACACTTTAGGATTAGTTACC 133 31596917 0.779429794 29 131 1301 0.974619289 2.283301229 0.121827411 0.368421053 0.573604061 133 5 0 192 3R:31596874-31597077 8 111 819 FBgn0039858 20619.65667 595.7166667 909.0766667 0.005383213 0.186330191 0.122101913 0 0 0 0.5 dme-miR-980-3p 6mer3-8 GGCAGC 3R 31597661 31597666 - 3R_31597661_31597666_- 0.546478643 0.545901977 0.54619031 0.000407718 CycG FBtr0333328 31596640 31599272 3R - 31597639 31597692 3'utr CycG FlyBase G56061.1 CAGAAAACTTTTATTTAAATCCACTTGGCAGCGGAATGTGCAAACTCCTGTCTG 102 31597667 0.834565582 5 97 515 0.976190476 2.089905111 0.03968254 0.176470588 0.333333333 102 3 0 123 3R:31597639-31597692 6 CycG FBtr0333328 31596640 31599272 GGCAGC 6mer3-8 dme-miR-980-3p 3R - 31597599 31597688 3'utr CycG FlyBase G42306.1 AAACTTTTATTTAAATCCACTTGGCAGCGGAATGTGCAAACTCCTGTCTGTAAATTTGAATAAAATGCGTTTGCCCCGCCAAAGGGGCAT 90 31597667 0.949070601 6 88 402 0.993055556 1.854306042 0.020833333 0.444444444 0.652777778 90 0 1 143 3R:31597599-31597688 6 90.5 820 FBgn0039858 20619.65667 595.7166667 909.0766667 0.004389016 0.151917858 0.09955156 1 1 1 0.5 dme-miR-1012-3p 8mer-A1 TTGACTAA 3R 31598272 31598279 - 3R_31598272_31598279_- 0.625381714 0.611460997 0.618421356 0.009843421 CycG FBtr0333328 31596640 31599272 3R - 31598186 31598309 3'utr CycG FlyBase G56063.1 AGAAAACTAAAGTATAATTCGCCGCCTGTATTGACTAAGAACTCTTAACAATAATATAATAACTTTAAACAAGGTACAATATGTAGTGTGTGTCTAGTAGATTTTTCTCTGTATAACAAAATCA 40 31598282 0.980977245 13 37 274 0.942307692 1.69019608 0.057692308 0.25 0.423076923 40 3 0 49 3R:31598186-31598309 8 CycG FBtr0333328 31596640 31599272 TTGACTAA 8mer-A1 dme-miR-1012-3p 3R - 31598253 31598323 3'utr CycG FlyBase G42309.1 ACGAGAAAGCCCATAGAAAACTAAAGTATAATTCGCCGCCTGTATTGACTAAGAACTCTTAACAATAATAT 35 31598282 0.999737317 10 32 186 0.941176471 1.681241237 0.098039216 0.382352941 0.588235294 34 3 0 48 3R:31598253-31598323 8 21.5 821 FBgn0039858 20619.65667 595.7166667 909.0766667 0.001042694 0.036090983 0.023650371 3 3 3 0.5 dme-miR-980-3p 6mer2-7 GCAGCT 3R 31615080 31615085 + 3R_31615080_31615085_+ 0.726231971 0.682192725 0.704212348 0.031140488 Med FBtr0085815|FBtr0085816|FBtr0337030 31614900|31614900|31614900 31615200|31615200|31615375 3R + 31615047 31615100 3'utr Med FlyBase G47428.1 AAAAAATTGAAACAACTTAGAAGTCTTAAGTATGCAGCTGTAAAGCACTAAGCA 14 31615079 0.976095096 6 12 72 0.8125 0.812913357 0.1875 0.142857143 0.25 14 2 1 13 3R:31615047-31615100 6 Med FBtr0337030|FBtr0085815|FBtr0085816 31614900|31614900|31614900 31615375|31615200|31615200 GCAGCT 6mer2-7 dme-miR-980-3p 3R + 31615060 31615100 3'utr Med FlyBase G35779.1 AACTTAGAAGTCTTAAGTATGCAGCTGTAAAGCACTAAGCA 10 31615079 0.770884507 3 8 63 0.8125 1.113943352 0 0.5 0.6875 10 3 0 13 3R:31615060-31615100 6 10 822 FBgn0011655 590.06 20.83333333 31.85 0.016947429 0.48 0.313971743 1 1 1 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA 3R 31676639 31676644 + 3R_31676639_31676644_+ 0.946162753 0.928736533 0.937449643 0.012322255 CG1815 FBtr0085823|FBtr0085823|FBtr0085823 31675699|31675699|31675699 31677971|31677971|31677971 3R + 31676589 31676675 3'utr CG1815 FlyBase G47457.1 GCGAATTGCATGCGTGAGGCGCAGTTGTACTGCTGTTGGAACACATCCTACTGTGACTATCCCTGCCAGCAGCTTCACTGGCCTGGA 14 31676637 0.967580579 8 13 74 1 1.204119983 0.1875 0.142857143 0.25 14 0 0 16 3R:31676589-31676675 6 CG1815 FBtr0085823|FBtr0085823|FBtr0085823 31675699|31675699|31675699 31677971|31677971|31677971 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 31676594 31676658 3'utr CG1815 FlyBase G35798.1 TTGCATGCGTGAGGCGCAGTTGTACTGCTGTTGGAACACATCCTACTGTGACTATCCCTGCCAGC 5 31676646 0.981573819 3 4 39 0.857142857 0.77815125 0.428571429 0.4 0.571428571 5 1 0 6 3R:31676594-31676658 6 4.5 823 FBgn0039863 1117.306667 23.11666667 35.54333333 0.004027542 0.194664744 0.126606021 2 -7 -2.5 0.5 dme-miR-282-5p 6mer2-7 GAGGCT 3R 31731787 31731792 + 3R_31731787_31731792_+ 0.944787795 0.97553276 0.960160278 0.021739998 ttk FBtr0085826|FBtr0303228|FBtr0085828|FBtr0085830 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 3R + 31731760 31731826 3'utr ttk FlyBase G47484.1 CTATCAAACGATTTATGTTGTATATCGGAGGCTTAAATTATCGCCAAAGAAAATGAAAATCAAAAAC 27 31731775 0.95655443 8 24 199 0.911764706 1.190331698 0.235294118 0.148148148 0.323529412 27 2 1 31 3R:31731760-31731826 6 ttk FBtr0085830|FBtr0303228|FBtr0085828|FBtr0085826 31730697|31730697|31730697|31730697 31732768|31732768|31732768|31732768 GAGGCT 6mer2-7 dme-miR-282-5p 3R + 31731759 31731810 3'utr ttk FlyBase G35819.1 TCTATCAAACGATTTATGTTGTATATCGGAGGCTTAAATTATCGCCAAAGAA 14 31731776 0.965029601 6 13 109 0.857142857 1.255272505 0.238095238 0.428571429 0.619047619 14 3 0 18 3R:31731759-31731810 6 18.5 824 FBgn0003870 1332.35 36.30666667 55.43333333 0.01388524 0.509548292 0.333734215 12 11 11.5 0.5 dme-miR-14-3p 6mer3-8 AAGACT 3R 31735290 31735295 + 3R_31735290_31735295_+ 0.978580058 0.88301826 0.930799159 0.067572397 ttk FBtr0085827|FBtr0303227|FBtr0085825|FBtr0085829 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 3R + 31735271 31735310 3'utr ttk FlyBase G47496.1 AACGCAACAAATACGACTTAAGACTTGTGCGCTCAATGAC 15 31735298 0.948357808 6 14 71 0.954545455 1.322219295 0.090909091 0.266666667 0.5 15 1 0 21 3R:31735271-31735310 6 ttk FBtr0085825|FBtr0085829|FBtr0303227|FBtr0085827 31734495|31734495|31734495|31734495 31735392|31735392|31735392|31735392 AAGACT 6mer3-8 dme-miR-14-3p 3R + 31735253 31735314 3'utr ttk FlyBase G35831.1 GATTTTTACAGTTTACTTAACGCAACAAATACGACTTAAGACTTGTGCGCTCAATGACTAGA 15 31735297 0.972504993 6 13 67 0.947368421 1.255272505 0.157894737 0.214285714 0.421052632 14 1 0 18 3R:31735253-31735314 6 13.5 825 FBgn0003870 1332.35 36.30666667 55.43333333 0.010132473 0.371832538 0.243535779 -8 -7 -7.5 0.5 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 4389455 4389461 + 3R_4389455_4389461_+ 0.410127081 0.41933738 0.41473223 0.006512666 tub FBtr0302338 4389383 4389813 3R + 4389432 4389478 3'utr tub FlyBase G39971.2 ATGCAACCCAGATGTATTCATTTGGCAGCTGGGTGTGGACCTTCTTA 321 4389454 0.790789293 8 314 2679 0.980769231 2.552668216 0.271978022 0.118380062 0.222527473 321 7 0 357 3R:4389432-4389478 7 tub FBtr0302338 4389383 4389813 GGCAGCT 7mer-m8 dme-miR-980-3p 3R + 4389382 4389496 stop_codon tub FlyBase G30187.1 TAGATAAAAGCACCGACCATCGGCGGAGATGACATTCCGTTCGATAACTTATGCAACCCAGATGTATTCATTTGGCAGCTGGGTGTGGACCTTCTTATGTTATGCATGAGGTCCA 242 4389453 0.986216904 15 234 1977 0.972826087 2.076761772 0.320652174 0.400826446 0.605978261 242 8 2 358 3R:4389382-4389496 7 274 826 FBgn0003882 635 38.28 58.43666667 0.431496063 7.157784744 4.688836917 1 2 1.5 0.5 dme-miR-13b-2-5p 7mer-m1 TTGACGC 3R 4406573 4406579 + 3R_4406573_4406579_+ 0.537776664 0.535873545 0.536825105 0.001345766 lost FBtr0078921 4406254 4407182 3R + 4406556 4406604 3'utr lost FlyBase G40000.1 AACGAGAACACAAATCATTGACGCTTTTTCTAAACAATTGCATTTGTTT 19 4406574 0.986775884 5 18 154 0.958333333 1.361727836 0 0.210526316 0.375 19 1 0 23 3R:4406556-4406604 7 lost FBtr0078921 4406254 4407182 TTGACGC 7mer-m1 dme-miR-13b-2-5p 3R + 4406558 4406605 3'utr lost FlyBase G30215.1 CGAGAACACAAATCATTGACGCTTTTTCTAAACAATTGCATTTGTTTT 18 4406574 0.941683695 7 16 153 0.888888889 1.380211242 0 0.388888889 0.592592593 18 3 0 24 3R:4406558-4406605 7 15 827 FBgn0263594 9369.39 424.1766667 652.24 0.001600958 0.035362624 0.02299767 -1 -1 -1 0.5 dme-miR-79-3p 6mer2-7 AGCTTT 3R 4465781 4465786 - 3R_4465781_4465786_- 0.950416723 0.821656487 0.886036605 0.091047211 CG31523 FBtr0078938|FBtr0078935|FBtr0335430|FBtr0335429|FBtr0078937|FBtr0345142|FBtr0078936 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 3R - 4465750 4465802 3'utr CG31523 FlyBase G47868.1 AAGATCATGGAGATAAAGCTTTTATACTGTAAGTGCAAACCGGCTTAAGGACG 8 4465781 0.982255773 5 8 62 1 0.903089987 0.25 0 0 8 0 0 8 3R:4465750-4465802 6 CG31523 FBtr0335429|FBtr0335430|FBtr0078935|FBtr0078938|FBtr0078936|FBtr0345142|FBtr0078937 4465419|4465419|4465419|4465419|4465419|4465419|4465419 4466690|4466690|4466690|4466690|4466690|4466690|4466690 AGCTTT 6mer2-7 dme-miR-79-3p 3R - 4465745 4465812 3'utr CG31523 FlyBase G36113.1 AAGAGTGACAAAGATCATGGAGATAAAGCTTTTATACTGTAAGTGCAAACCGGCTTAAGGACGAAGAC 8 4465773 0.974210484 6 7 46 0.9 0.954242509 0.2 0.25 0.4 8 1 0 9 3R:4465745-4465812 6 6 828 FBgn0051523 3326.983333 148.2633333 227.5733333 0.001803436 0.040468536 0.026365128 -5 -13 -9 0.5 dme-miR-965-3p 7mer-A1 ACGCTTA 3R 4787182 4787188 - 3R_4787182_4787188_- 0.8132472 0.75560662 0.78442691 0.040758059 ctrip FBtr0301437|FBtr0303914|FBtr0344030|FBtr0334903|FBtr0303911|FBtr0303917|FBtr0303915|FBtr0303912|FBtr0334902|FBtr0344028|FBtr0344029 4787043|4787043|4787043|4786282|4787043|4787043|4787043|4787043|4786282|4787043|4786282 4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826 3R - 4787125 4787217 3'utr ctrip FlyBase G47951.1 AATTATTTGTAAGCATACAATGTGCATAAACGCTTATTAGAAAGAAACGTGAATGAAAATACAATGAAGGGGAAACACTGAAGCATTGGAGGT 125 4787181 0.892332085 13 119 664 0.972789116 2.155336037 0.142857143 0.152 0.278911565 125 4 0 143 3R:4787125-4787217 7 ctrip FBtr0344029|FBtr0344028|FBtr0334902|FBtr0303915|FBtr0303912|FBtr0303917|FBtr0303911|FBtr0334903|FBtr0344030|FBtr0303914|FBtr0301437 4786282|4787043|4786282|4787043|4787043|4787043|4787043|4786282|4787043|4787043|4787043 4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826|4787826 ACGCTTA 7mer-A1 dme-miR-965-3p 3R - 4787126 4787207 3'utr ctrip FlyBase G36179.1 AAGCATACAATGTGCATAAACGCTTATTAGAAAGAAACGTGAATGAAAATACAATGAAGGGGAAACACTGAAGCATTGGAGG 76 4787181 0.889613743 8 71 391 0.943396226 2 0.20754717 0.355263158 0.537735849 76 6 0 100 3R:4787126-4787207 7 77.5 829 FBgn0260794 5155.516667 58.3 89.56666667 0.015032441 1.329331046 0.865277261 -7 -7 -7 0.5 dme-miR-14-3p 8mer-A1 AAGACTGA 3R 4818773 4818780 - 3R_4818773_4818780_- 0.629260714 0.620782642 0.625021678 0.005994922 CG14657 FBtr0334901|FBtr0078875|FBtr0334900 4818273|4818539|4817978 4820262|4819106|4819106 3R - 4818759 4818805 3'utr CG14657 FlyBase G48023.1 ATTACAGAATTCTGGCTTGGTCTTCAAGACTGATATAACAAAAAGCA 76 4818784 0.640526233 9 67 599 0.862068966 1.875061263 0.149425287 0.131578947 0.24137931 76 12 0 75 3R:4818759-4818805 8 CG14657 FBtr0334900|FBtr0078875|FBtr0334901 4817978|4818539|4818273 4819106|4819106|4820262 AAGACTGA 8mer-A1 dme-miR-14-3p 3R - 4818747 4818803 3'utr CG14657 FlyBase G36240.1 TACAGAATTCTGGCTTGGTCTTCAAGACTGATATAACAAAAAGCATCCGCTACGAAT 45 4818784 0.933472837 9 41 351 0.930555556 1.525044807 0.194444444 0.4 0.625 45 4 1 67 3R:4818747-4818803 8 56 830 FBgn0037282 892.63 37.31666667 57.47333333 0.06273596 1.500669942 0.974364923 4 4 4 0.5 dme-miR-14-3p 7mer-A1 AGACTGA 3R 4938248 4938254 + 3R_4938248_4938254_+ 0.820546172 0.457328662 0.638937417 0.256833557 Cdep FBtr0336812 4938074 4940218 3R + 4938232 4938258 3'utr Cdep FlyBase G40137.1 AACTTATTTGTAACTGAGACTGATTTA 6 4938243 0.694031952 4 6 52 1 0.84509804 0 0.166666667 0.285714286 6 0 0 7 3R:4938232-4938258 7 Cdep FBtr0336812 4938074 4940218 AGACTGA 7mer-A1 dme-miR-14-3p 3R + 4938237 4938267 3'utr Cdep FlyBase G30329.1 ATTTGTAACTGAGACTGATTTACGACTAACA 7 4938246 0.827758969 4 7 50 1 1.079181246 0 0.428571429 0.666666667 7 0 0 12 3R:4938237-4938267 7 6.5 831 FBgn0265082 2047.223333 54.77333333 83.9 0.003175032 0.118670886 0.077473182 5 2 3.5 0.5 dme-miR-34-5p 7mer-A1 ACTGCCA 3R 5226951 5226957 + 3R_5226951_5226957_+ 0.727251147 0.711061822 0.719156484 0.011447564 Vps37B FBtr0078777|FBtr0305002 5226913|5226913 5227526|5227526 3R + 5226912 5226989 stop_codon Vps37B FlyBase G40174.1 TGAGGTCTTGGTCCTTGGTCCTTGGTCCTCAGCGAATTAACTGCCATGGCGCATCAGTCTGCAGCAGGCAAGTTTGTA 24 5226971 0.727038355 9 19 142 0.806451613 1.397940009 0.258064516 0.291666667 0.451612903 24 6 0 25 3R:5226912-5226989 7 Vps37B FBtr0078777|FBtr0305002|FBtr0305001 5226913|5226913|5226913 5227526|5227526|5227526 ACTGCCA 7mer-A1 dme-miR-34-5p 3R + 5226912 5226983 stop_codon Vps37B FlyBase G30347.1 TGAGGTCTTGGTCCTTGGTCCTTGGTCCTCAGCGAATTAACTGCCATGGCGCATCAGTCTGCAGCAGGCAAG 20 5226948 0.953393778 10 20 119 1 1.447158031 0.392857143 0.35 0.535714286 20 0 0 28 3R:5226912-5226983 7 12 832 FBgn0037299 170.3333333 20.86666667 31.67333333 0.070450098 0.575079872 0.378867607 -20 3 -8.5 0.5 dme-miR-980-3p 8mer-A1 GGCAGCTA 3R 5540770 5540777 - 3R_5540770_5540777_- 0.635508003 0.39095116 0.513229581 0.172927772 CG2519 FBtr0078761|FBtr0336771|FBtr0078762 5539508|5539508|5539508 5541031|5541031|5541031 3R - 5540513 5540985 3'utr CG2519 FlyBase G48230.1 TCATATAGATTTCTCGTGGCTGCTCGCTGTTGAAAAAAATCCGTTCTATCGAATGAAATCTCGAATATTGTGTTATTAAAGCGATGTTTTAAAAAGGAATCCGATTGTTCACACAAGAGTCCGAATCTCAATTAGAAAAACAAAATTACAGACCAGGGAACAATCGTAAATACTTCAAATTTTCTTCCCTTCTCAATATGAAATCCAAGGCAGCTAGCTAAAGTGTAATAAGAGCAAATTTATCTAACTATATTTACAGTATATGATATACATATATGATTCGGTAATCTACACCGCATAGGCGAAAAATCGAAAAGTAAAAACTTCAATCTAGTCGCAAGCAAATTTTATGCAGCAATCTAATTCGTTTTCGTATGCAATCTATAGGCATATTCTAATCAAAGCTTCATGACAGTTTTACATCCGAGTTTAGTTTATTGCGATATCCGTTCTAAAAGCCAATAAAGAAACAT 351 5540784 0.980791009 67 305 2176 0.871733967 1.610423555 0.123515439 0.170940171 0.308788599 351 46 8 367 3R:5540513-5540985 8 CG2519 FBtr0078762|FBtr0078761|FBtr0336771 5539508|5539508|5539508 5541031|5541031|5541031 GGCAGCTA 8mer-A1 dme-miR-980-3p 3R - 5540748 5540871 3'utr CG2519 FlyBase G36417.1 AAGAGTCCGAATCTCAATTAGAAAAACAAAATTACAGACCAGGGAACAATCGTAAATACTTCAAATTTTCTTCCCTTCTCAATATGAAATCCAAGGCAGCTAGCTAAAGTGTAATAAGAGCAAA 106 5540782 0.854997342 22 90 520 0.838709677 1.414973348 0.064516129 0.349056604 0.55483871 106 21 4 130 3R:5540748-5540871 8 85.5 833 FBgn0037336 963.7466667 20.52333333 31.41666667 0.08871626 4.16598993 2.721485411 7 5 6 0.5 dme-miR-970-3p 6mer3-8 TCTTAT 3R 5570196 5570201 + 3R_5570196_5570201_+ 0.807949835 0.944724852 0.876337344 0.096714601 Rheb FBtr0078694|FBtr0078693 5570116|5570116 5570491|5570491 3R + 5570140 5570294 3'utr Rheb FlyBase G40293.1 CGGCCGAACTGTTGGAAATACGGCAAATCGCTATGGCAATACGAAAATCGATTATCTCTTATCTACACAGTTGGGTCAGCGTGCATGGCGGGGCCGTACCCTTTGTGCGCAGCAGGAAAATCTAAAAATCTAATAGACCTAGTATTCTTAAGACC 61 5570198 0.983994104 16 59 455 0.96969697 1.505149978 0.075757576 0.081967213 0.151515152 61 1 1 64 3R:5570140-5570294 6 Rheb FBtr0078694|FBtr0078693 5570116|5570116 5570491|5570491 TCTTAT 6mer3-8 dme-miR-970-3p 3R + 5570180 5570247 3'utr Rheb FlyBase G30441.1 ACGAAAATCGATTATCTCTTATCTACACAGTTGGGTCAGCGTGCATGGCGGGGCCGTACCCTTTGTGC 25 5570191 0.983910273 7 24 185 0.954545455 1.62324929 0 0.6 0.772727273 25 2 0 42 3R:5570180-5570247 6 30.5 834 FBgn0041191 427.6933333 44.04666667 67.49 0.071312779 0.692447404 0.451918803 -2 5 1.5 0.5 dme-miR-282-5p 7mer-A1 GAGGCTA 3R 5582119 5582125 - 3R_5582119_5582125_- 0.474724311 0.475068286 0.474896299 0.000243245 CG2926 FBtr0336762 5579299 5584787 3R - 5582099 5582179 5'utr CG2926 FlyBase G48289.1 ATTTGCAGTGCTGTGGGAGCAGTAAAGAAGACGAAGCGCAAGCGTAAAAAGTTGGAGGCTAAGCCAGTGGCTATCATCGAT 123 5582127 0.951597146 7 121 561 0.978571429 2.136720567 0.428571429 0.12195122 0.228571429 123 3 0 137 3R:5582099-5582179 7 CG2926 FBtr0336762 5579299 5584787 GAGGCTA 7mer-A1 dme-miR-282-5p 3R - 5582099 5582148 5'utr CG2926 FlyBase G36458.1 CGAAGCGCAAGCGTAAAAAGTTGGAGGCTAAGCCAGTGGCTATCATCGAT 87 5582127 0.817003252 4 83 401 0.944444444 2.075546961 0.531746032 0.356321839 0.555555556 87 7 0 119 3R:5582099-5582148 7 101.5 835 FBgn0037344 2023.256667 29.51333333 45.14 0.050166646 3.43912356 2.248560035 2 2 2 0.5 dme-miR-305-5p 8mer-m1 AGTACAAT 3R 5584645 5584652 - 3R_5584645_5584652_- 0.538144083 0.558078853 0.548111468 0.014096032 CG2926 FBtr0336762 5579299 5584787 3R - 5584595 5584680 intron-5'utr CG2926 FlyBase G48294.1 AGGATGATGACGATATGAATGAAGATTTAGTACAATTAGATGATGATGATGAGGATACGGATATACCATTGCCTTTGGGGCCTGAG 52 5584654 0.724643409 14 52 383 1 1.763427994 0.172413793 0.115384615 0.206896552 52 0 0 58 3R:5584595-5584680 8 CG2926 FBtr0336762 5579299 5584787 AGTACAAT 8mer-m1 dme-miR-305-5p 3R - 5584534 5584670 5'utr CG2926 FlyBase G36463.1 CGATATGAATGAAGATTTAGTACAATTAGATGATGATGATGAGGATACGGATATACCATTGCCTTTGGGGCCTGAGCCCGAACCCGTTCCCGAAAAAGTCCCGAAAAGTAGTGATGATGACCTCTACGAGCCAGAGA 40 5584654 0.955552208 15 34 251 0.85 1.008600172 0.316666667 0.375 0.583333333 40 5 4 51 3R:5584534-5584670 8 31.5 836 FBgn0037344 2023.256667 29.51333333 45.14 0.015568959 1.067314208 0.697828977 2 2 2 0.5 dme-miR-968-5p 8mer-A1 ACTACTTA 3R 5678828 5678835 + 3R_5678828_5678835_+ 0.482677358 0.449122126 0.465899742 0.02372718 Atg17 FBtr0078716|FBtr0334946 5678800|5678800 5679930|5679930 3R + 5678812 5678868 3'utr Atg17 FlyBase G40433.1 TTGGGACTAACATATAACTACTTATATACATAAACGGAGTGTGTATCTAGGCTAAAT 17 5678836 0.77576922 5 14 122 0.823529412 0.84509804 0.411764706 0 0 17 2 1 14 3R:5678812-5678868 8 Atg17 FBtr0334946|FBtr0078716 5678800|5678800 5679930|5679930 ACTACTTA 8mer-A1 dme-miR-968-5p 3R + 5678793 5678892 stop_codon Atg17 FlyBase G30533.1 TCCGAGTAGTGTACGACAGTTGGGACTAACATATAACTACTTATATACATAAACGGAGTGTGTATCTAGGCTAAATCTTGTACTCTATGTAGGAACCGCA 22 5678836 0.977926325 8 19 127 0.9 1.431363764 0.366666667 0.318181818 0.5 22 3 0 27 3R:5678793-5678892 8 12 837 FBgn0037363 1350.75 25.94 39.87666667 0.008883953 0.462606014 0.300927861 -8 -8 -8 0.5 dme-miR-308-3p 7mer-m1 TGTGATT 3R 5826342 5826348 + 3R_5826342_5826348_+ 0.456456936 0.510943972 0.483700454 0.038528198 dgrn FBtr0078638|FBtr0078639|FBtr0344116 5826237|5826237|5826237 5826576|5826576|5826576 3R + 5826284 5826402 3'utr dgrn FlyBase G40537.1 AATATAGTTTAAAAAAAAACGCTTAACTATGTTAGAGACGGCAAATAATGTCTGTTCTTGTGATTCAGAAAAAATTAGTTATTTAAGTTGTCCTATGTAATCAGTGGCGCCCAAAAATA 83 5826341 0.99890242 16 73 711 0.871287129 1.467361417 0.297029703 0.168674699 0.316831683 83 11 2 88 3R:5826284-5826402 7 dgrn FBtr0078638|FBtr0078639|FBtr0344116 5826237|5826237|5826237 5826576|5826576|5826576 TGTGATT 7mer-m1 dme-miR-308-3p 3R + 5826258 5826373 3'utr dgrn FlyBase G30596.1 ATTTTTTGCTCTGTGAGCCTTAATATAATATAGTTTAAAAAAAAACGCTTAACTATGTTAGAGACGGCAAATAATGTCTGTTCTTGTGATTCAGAAAAAATTAGTTATTTAAGTTG 48 5826341 0.802247247 13 43 434 0.925373134 1.315270435 0.208955224 0.270833333 0.47761194 48 3 2 62 3R:5826258-5826373 7 48.5 838 FBgn0037384 485 36.97 56.92333333 0.1 1.311874493 0.852023189 1 1 1 0.5 dme-miR-980-5p 7mer-m1 AAAAACT 3R 5826418 5826424 + 3R_5826418_5826424_+ 0.441558104 0.44633205 0.443945077 0.003375657 dgrn FBtr0078638|FBtr0078639|FBtr0344116 5826237|5826237|5826237 5826576|5826576|5826576 3R + 5826408 5826507 3'utr dgrn FlyBase G40538.1 ATACAACTATAAAAACTAAAGACTTCACTTTTGATGTATGAAACCATCTCAGGCTAGAATAATATAAGAACGACCGAAAGGAGTGTCAAAGTATTATGTA 24 5826417 0.969442467 10 23 131 1 1.414973348 0.115384615 0.083333333 0.153846154 24 0 0 26 3R:5826408-5826507 7 dgrn FBtr0078638|FBtr0078639|FBtr0344116 5826237|5826237|5826237 5826576|5826576|5826576 AAAAACT 7mer-m1 dme-miR-980-5p 3R + 5826410 5826473 3'utr dgrn FlyBase G30597.1 ACAACTATAAAAACTAAAGACTTCACTTTTGATGTATGAAACCATCTCAGGCTAGAATAATATA 14 5826416 0.715671358 9 13 65 0.863636364 0.67669361 0.136363636 0.5 0.681818182 14 0 3 19 3R:5826410-5826473 7 11.5 839 FBgn0037384 485 36.97 56.92333333 0.02371134 0.311063024 0.202026117 1 2 1.5 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 6000820 6000826 - 3R_6000820_6000826_- 0.731235295 0.726906521 0.729070908 0.003060924 Rm62 FBtr0309321|FBtr0309321|FBtr0309321|FBtr0078653|FBtr0078653|FBtr0078653|FBtr0078650|FBtr0078650|FBtr0078650|FBtr0078651|FBtr0078651|FBtr0078651|FBtr0302597|FBtr0302597|FBtr0302597|FBtr0309322|FBtr0309322|FBtr0309322|FBtr0078654|FBtr0078654|FBtr0078654|FBtr0309320|FBtr0309320|FBtr0309320|FBtr0078649|FBtr0078649|FBtr0078649|FBtr0301947|FBtr0301947|FBtr0301947|FBtr0078652|FBtr0078652|FBtr0078652|FBtr0309319|FBtr0309319|FBtr0309319 6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000424|6000424|6000424|6000429|6000429|6000429|6000429|6000429|6000429|6000424|6000424|6000424|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429 6003027|6003027|6003027|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6002635|6002635|6002635|6001162|6001162|6001162|6002646|6002646|6002646|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6003646|6003646|6003646 3R - 6000799 6000924 3'utr Rm62 FlyBase G48504.2 AAGTTATTTGACGCTGGCCGCGAGGTCGGTACAACACAATCCAATTGAGAACATCAAAAACACTTTACTTAAACGCAAAAACCAATTTTCAAATATCATGTGATAATTTCTTAATTTAACGCAACG 195 6000829 0.807415952 23 177 1847 0.918103448 1.629409599 0.043103448 0.174358974 0.306034483 195 15 4 213 3R:6000799-6000924 7 Rm62 FBtr0078654|FBtr0078654|FBtr0078654|FBtr0309320|FBtr0309320|FBtr0309320|FBtr0301947|FBtr0301947|FBtr0301947|FBtr0078649|FBtr0078649|FBtr0078649|FBtr0309319|FBtr0309319|FBtr0309319|FBtr0078652|FBtr0078652|FBtr0078652|FBtr0309321|FBtr0309321|FBtr0309321|FBtr0078650|FBtr0078650|FBtr0078650|FBtr0078651|FBtr0078651|FBtr0078651|FBtr0302597|FBtr0302597|FBtr0302597|FBtr0078653|FBtr0078653|FBtr0078653|FBtr0309322|FBtr0309322|FBtr0309322 6000429|6000429|6000429|6000424|6000424|6000424|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000429|6000424|6000424|6000424|6000429|6000429|6000429|6000429|6000429|6000429 6001162|6001162|6001162|6002646|6002646|6002646|6001162|6001162|6001162|6001162|6001162|6001162|6003646|6003646|6003646|6001162|6001162|6001162|6003027|6003027|6003027|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6001162|6002635|6002635|6002635 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 6000802 6000878 3'utr Rm62 FlyBase G36612.1 GAGAACATCAAAAACACTTTACTTAAACGCAAAAACCAATTTTCAAATATCATGTGATAATTTCTTAATTTAACGCA 138 6000830 0.776641012 15 123 1287 0.893939394 1.946943271 0.065656566 0.369565217 0.560606061 138 20 1 177 3R:6000802-6000878 7 145.5 840 FBgn0003261 4149.96 168.6633333 258.5433333 0.035060579 0.86266527 0.56276833 3 4 3.5 0.5 dme-miR-92b-3p 7mer-m1 TGCAATT 3R 7519662 7519668 - 3R_7519662_7519668_- 0.668639149 0.745749316 0.707194232 0.054525145 alpha-Est7 FBtr0081550 7519561 7519750 3R - 7519642 7519730 3'utr alpha-Est7 FlyBase G48721.1 CAGCCTAACAAAGAAGTCTCTAGAAACTGTAAATAGGTCAAAATGCTTTATAAAATATATTCTGCAATTGGATTGTTTTGCTTTATAAC 41 7519680 0.818083473 13 39 298 0.96 1.380211242 0.06 0.219512195 0.36 41 1 1 48 3R:7519642-7519730 7 alpha-Est7 FBtr0081550 7519561 7519750 TGCAATT 7mer-m1 dme-miR-92b-3p 3R - 7519614 7519734 3'utr alpha-Est7 FlyBase G36770.1 TGTACAGCCTAACAAAGAAGTCTCTAGAAACTGTAAATAGGTCAAAATGCTTTATAAAATATATTCTGCAATTGGATTGTTTTGCTTTATAACTAGTTTGCCCAATGATTGCATGTGGATG 28 7519682 0.982265086 12 27 210 1 1.612783857 0.097560976 0.25 0.487804878 28 0 0 41 3R:7519614-7519734 7 7.5 841 FBgn0015575 416.1433333 24.78333333 37.7 0.018022636 0.30262273 0.198938992 12 14 13 0.5 dme-miR-34-5p 7mer-m8 CACTGCC 3R 7857595 7857601 - 3R_7857595_7857601_- 0.67402629 0.60344727 0.63873678 0.04990689 CG17816 FBtr0333829|FBtr0113202 7855585|7855580 7858911|7858173 3R - 7857585 7857611 3'utr CG17816 FlyBase G48753.1 AAGACACTTTCACTGCCTGAACCCAAT 6 7857594 0.904793495 3 6 25 1 0.84509804 0.142857143 0.166666667 0.285714286 6 0 0 7 3R:7857585-7857611 7 CG17816 FBtr0113202|FBtr0333829 7855580|7855585 7858173|7858911 CACTGCC 7mer-m8 dme-miR-34-5p 3R - 7857586 7857611 3'utr CG17816 FlyBase G36796.1 AAGACACTTTCACTGCCTGAACCCAA 5 7857594 0.941084292 2 4 19 0.818181818 0.954242509 0.181818182 0.8 0.909090909 5 2 0 9 3R:7857586-7857611 7 5.5 842 FBgn0037525 90 2.533333333 3.903333333 0.061111111 2.171052632 1.409052092 -7 -7 -7 0.5 dme-miR-1008-3p 7mer-m8 AGCTGTG 3R 8005344 8005350 + 3R_8005344_8005350_+ 0.671316027 0.663348046 0.667332037 0.005634227 CG2698 FBtr0335228|FBtr0308075|FBtr0335225|FBtr0335226|FBtr0081784 8005015|8003875|8005283|8005283|8005283 8005719|8005719|8005719|8005719|8005719 3R + 8005300 8005428 3'utr CG2698 FlyBase G40847.1 AAACTACGAATTTCCTTTTAATACTCGAACTGCGAACTAACATAAGCTGTGTGGCCAAATACCTGACAATCAAAATGAGATTGGCCCGAATATCATAACCTAGACATAGGCTGGAGCTTCCTTTAACTA 55 8005351 0.956982528 12 52 248 0.9375 1.176091259 0.03125 0.163636364 0.28125 55 1 3 60 3R:8005300-8005428 7 CG2698 FBtr0081784|FBtr0335225|FBtr0335226|FBtr0335228|FBtr0308075 8005283|8005283|8005283|8005015|8003875 8005719|8005719|8005719|8005719|8005719 AGCTGTG 7mer-m8 dme-miR-1008-3p 3R + 8005315 8005390 3'utr CG2698 FlyBase G30831.1 TTTTAATACTCGAACTGCGAACTAACATAAGCTGTGTGGCCAAATACCTGACAATCAAAATGAGATTGGCCCGAAT 39 8005351 0.956495156 10 36 170 0.93877551 1.361727836 0 0.230769231 0.387755102 39 2 1 46 3R:8005315-8005390 7 31.5 843 FBgn0037536 142.6833333 5.336666667 8.11 0.220768602 5.902560899 3.884093711 -7 -7 -7 0.5 dme-miR-14-3p 7mer-m8 AAGACTG 3R 8237527 8237533 - 3R_8237527_8237533_- 0.669542709 0.651518526 0.660530618 0.012745034 Ada2b FBtr0334315|FBtr0081807 8236630|8237112 8237918|8237918 3R - 8237471 8237558 3'utr Ada2b FlyBase G48854.1 TACGCCCACCACCTACCTCTCGGTTAAGACTGTCTGCTTGAGCGGAGCACCATCGTTGGGTAGTCCTATGGAGACTTCGCTGCGCAAG 34 8237534 0.946006529 12 30 235 0.880952381 1.568201724 0.119047619 0.205882353 0.357142857 34 5 0 37 3R:8237471-8237558 7 Ada2b FBtr0081807|FBtr0334315 8237112|8236630 8237918|8237918 AAGACTG 7mer-m8 dme-miR-14-3p 3R - 8237473 8237596 3'utr Ada2b FlyBase G36878.1 AGTCACAACGAGCTGGATCTGTGCAAGAAGCATAATATTACGCCCACCACCTACCTCTCGGTTAAGACTGTCTGCTTGAGCGGAGCACCATCGTTGGGTAGTCCTATGGAGACTTCGCTGCGCA 24 8237534 0.983305192 15 18 137 0.75 1.079181246 0.28125 0.25 0.4375 24 7 1 24 3R:8237473-8237596 7 21 844 FBgn0037555 444.2066667 24.31 37.33666667 0.047275292 0.86384204 0.562449781 1 1 1 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 8240818 8240824 - 3R_8240818_8240824_- 0.782574149 0.786903744 0.784738947 0.00306149 CG9636 FBtr0081806|FBtr0081806|FBtr0081806 8240745|8240745|8240745 8242389|8242389|8242389 3R - 8240810 8240850 3'utr CG9636 FlyBase G48864.1 ATTTTATATATATTAATATTATTTTTTGTGATAATTTAAAA 19 8240826 0.616078792 6 17 260 0.913043478 0.84509804 0 0.210526316 0.347826087 19 0 2 21 3R:8240810-8240850 7 CG9636 FBtr0081806|FBtr0081806|FBtr0081806 8240745|8240745|8240745 8242389|8242389|8242389 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R - 8240804 8240850 3'utr CG9636 FlyBase G36884.1 ATTTTATATATATTAATATTATTTTTTGTGATAATTTAAAAAAGGCA 18 8240827 0.6500114 8 15 242 0.769230769 1 0 0.333333333 0.538461538 18 5 1 20 3R:8240804-8240850 7 18 845 FBgn0037556 751.8933333 33.43666667 51.34666667 0.023939566 0.538331173 0.350558297 2 3 2.5 0.5 dme-miR-283-5p 8mer-A1 TGATATTA 3R 8352141 8352148 + 3R_8352141_8352148_+ 0.574352593 0.510030843 0.542191718 0.045482381 Atg13 FBtr0081843 8351704 8352817 3R + 8352094 8352153 3'utr Atg13 FlyBase G41016.1 ATATTTATATATGCCATTGTGTTAAGTAGAGTTGATAGGCTGCTATTTGATATTACCCAC 176 8352129 0.675267041 16 167 1457 0.946341463 1.50965048 0.209756098 0.142045455 0.263414634 176 6 5 194 3R:8352094-8352153 8 Atg13 FBtr0081843 8351704 8352817 TGATATTA 8mer-A1 dme-miR-283-5p 3R + 8352085 8352158 3'utr Atg13 FlyBase G30956.1 CCCGCCCTCATATTTATATATGCCATTGTGTTAAGTAGAGTTGATAGGCTGCTATTTGATATTACCCACTATGT 115 8352137 0.888949192 14 110 954 0.956284153 2.243038049 0.224043716 0.382608696 0.612021858 115 8 0 175 3R:8352085-8352158 8 80.5 846 FBgn0261108 690.5733333 27.67666667 42.22333333 0.116569807 2.908587258 1.906528776 12 4 8 0.5 dme-miR-305-3p 6mer3-8 ATGTGC 3R 8735670 8735675 + 3R_8735670_8735675_+ 0.555841581 0.701753992 0.628797786 0.103175647 CG8202 FBtr0081914 8735615 8735837 3R + 8735628 8735687 3'utr CG8202 FlyBase G41138.1 GTAAATCCTATGGTTATTTATTTGCTGAGATTATATATTCTTATGTGCATGAATCTTTTA 24 8735664 0.991982066 6 23 274 0.965517241 1.447158031 0.275862069 0.166666667 0.310344828 24 1 0 28 3R:8735628-8735687 6 CG8202 FBtr0081914 8735615 8735837 ATGTGC 6mer3-8 dme-miR-305-3p 3R + 8735628 8735686 3'utr CG8202 FlyBase G31039.1 GTAAATCCTATGGTTATTTATTTGCTGAGATTATATATTCTTATGTGCATGAATCTTTT 31 8735663 0.993303019 7 30 361 0.98 1.389166084 0.32 0.387096774 0.62 31 0 1 49 3R:8735628-8735686 6 23.5 847 FBgn0037622 349.97 13.58666667 20.66666667 0.067148613 1.729636899 1.137096774 6 7 6.5 0.5 dme-miR-932-5p 8mer-A1 GGAATTGA 3R 8774371 8774378 - 3R_8774371_8774378_- 0.547603645 0.565371906 0.556487775 0.012564085 Pif1B FBtr0332503|FBtr0091716|FBtr0091717|FBtr0332504 8774284|8774284|8774284|8774284 8774612|8774612|8774612|8774612 3R - 8774356 8774515 3'utr Pif1B FlyBase G49033.1 TATAGCGTATTGATATGTAGTGTTTGTTAAGAGTTCTTTATCTGGAGGATACCAATTGAAATCGTCTGTACGTAGTGCTTTGCATAGTGCCTTAAATCGTAATAGTATATCGTAAGCAAATATCAATGCATTGTAATGGAATTGAAAGCAGGTGGCTTCA 162 8774379 0.984877627 22 155 1255 0.943877551 2.267171728 0.076530612 0.179012346 0.321428571 162 11 0 185 3R:8774356-8774515 8 Pif1B FBtr0332504|FBtr0091717|FBtr0091716|FBtr0332503 8774284|8774284|8774284|8774284 8774612|8774612|8774612|8774612 GGAATTGA 8mer-A1 dme-miR-932-5p 3R - 8774356 8774418 3'utr Pif1B FlyBase G37011.1 CGTAATAGTATATCGTAAGCAAATATCAATGCATTGTAATGGAATTGAAAGCAGGTGGCTTCA 100 8774379 0.76898868 7 90 740 0.927631579 1.547159121 0.059210526 0.35 0.572368421 100 8 3 141 3R:8774356-8774418 8 68.5 848 FBgn0046874 160.93 2.47 3.813333333 0.425650904 27.73279352 17.96328671 1 1 1 0.5 dme-miR-277-3p 7mer-m8 TGCATTT 3R 8815492 8815498 - 3R_8815492_8815498_- 0.441625011 0.434811218 0.438218114 0.004818084 CG9821 FBtr0081931|FBtr0334660|FBtr0334659 8814683|8814683|8813488 8817862|8817862|8817862 3R - 8815244 8815536 3'utr CG9821 FlyBase G49081.1 ACCCCACAGAAAGACCCAAAACTTGTCGCGCAGAATTTTGCATTTTTTTTAAGTGTAAGCAAAACGTTTGTTACTTACTGGACGTCAGTTTAAGCGGAGAACAGCTTAGATTTCATTGAAGCAGGATAGAGATACAGATGCAAAACCTATTTGTAAAATTCAAAAGAAGAGAAAACCACTTTACTTAAAACAGACCAAAACAGCCCAGATTCGCCCGCTCTGCCTTGGACTGTGGGCACAAACGTTCCGGCCCGCTGACTTTTTCAACACCAATCAGTACAAAATAATTTCCA 284 8815499 0.984709519 42 268 2152 0.93982808 1.913813852 0.283667622 0.169014085 0.323782235 284 18 3 328 3R:8815244-8815536 7 CG9821 FBtr0334659|FBtr0081931|FBtr0334660 8813488|8814683|8814683 8817862|8817862|8817862 TGCATTT 7mer-m8 dme-miR-277-3p 3R - 8815375 8815525 3'utr CG9821 FlyBase G37046.1 AGACCCAAAACTTGTCGCGCAGAATTTTGCATTTTTTTTAAGTGTAAGCAAAACGTTTGTTACTTACTGGACGTCAGTTTAAGCGGAGAACAGCTTAGATTTCATTGAAGCAGGATAGAGATACAGATGCAAAACCTATTTGTAAAATTCA 115 8815499 0.983829572 26 107 1106 0.915662651 2.181843588 0.391566265 0.339130435 0.542168675 115 14 0 152 3R:8815375-8815525 7 98.5 849 FBgn0037636 4388.82 121.91 186.95 0.02244339 0.807973095 0.526878845 1 1 1 0.5 dme-bantam-3p 8mer-A1 TGATCTCA 3R 8817547 8817554 - 3R_8817547_8817554_- 0.580723803 0.584972811 0.582848307 0.003004497 CG9821 FBtr0081931|FBtr0334660|FBtr0334659 8814683|8814683|8813488 8817862|8817862|8817862 3R - 8817404 8817579 3'utr CG9821 FlyBase G49088.1 AAAAAAAAAACAAGAGTAATGTTTGTGATCTCAAGTGTGTATCATAAAACAATTAAACCAATTTGAGAAGCTATTAGGTGAGAAGAGAAAAACTGTTTCAAGAAAAGAAAACTGAAAGCAAACAAAATACAAGTAAAAAACACACAAACTACTGTCCTCACACAACCGACCGACAA 1553 8817555 0.986457162 31 1472 12650 0.950578339 2.143255074 0.087276551 0.186735351 0.335962145 1553 82 12 1808 3R:8817404-8817579 8 CG9821 FBtr0334659|FBtr0081931|FBtr0334660 8813488|8814683|8814683 8817862|8817862|8817862 TGATCTCA 8mer-A1 dme-bantam-3p 3R - 8817411 8817633 3'utr CG9821 FlyBase G37051.1 AAAAAAAGCGAAAACATTTCAACTGGAAATTTGAACTTTTTTAAACAAAAACAAAAAAAAAAAACAAGAGTAATGTTTGTGATCTCAAGTGTGTATCATAAAACAATTAAACCAATTTGAGAAGCTATTAGGTGAGAAGAGAAAAACTGTTTCAAGAAAAGAAAACTGAAAGCAAACAAAATACAAGTAAAAAACACACAAACTACTGTCCTCACACAACCGA 1326 8817555 0.977850059 33 1250 10639 0.949243533 1.92719177 0.105417277 0.386877828 0.603221083 1326 82 22 1945 3R:8817411-8817633 8 1295 850 FBgn0037636 4388.82 121.91 186.95 0.295067923 10.62259044 6.926985825 1 1 1 0.5 dme-miR-33-5p 7mer-A1 AATGCAA 3R 8827831 8827837 - 3R_8827831_8827837_- 0.60402249 0.728561177 0.666291833 0.088062159 pyd FBtr0305301|FBtr0310205|FBtr0305297|FBtr0305304|FBtr0305298|FBtr0305299|FBtr0305296|FBtr0305295 8827496|8827066|8827496|8827496|8827496|8827496|8827496|8827066 8828314|8828094|8828094|8828314|8828314|8828314|8828314|8828314 3R - 8827783 8827858 3'utr pyd FlyBase G49103.1 GAGCTAGAAATTAATCAATCGAATGCAATGGATACTTGTATAAAGCGACTAGAATTTAATTTCATACACAAATTAT 26 8827835 0.973883204 7 26 163 1 1.531478917 0.117647059 0.230769231 0.411764706 26 0 0 34 3R:8827783-8827858 7 pyd FBtr0305296|FBtr0305295|FBtr0305298|FBtr0305299|FBtr0305297|FBtr0305304|FBtr0305301|FBtr0310205 8827496|8827066|8827496|8827496|8827496|8827496|8827496|8827066 8828314|8828314|8828314|8828314|8828094|8828314|8828314|8828094 AATGCAA 7mer-A1 dme-miR-33-5p 3R - 8827788 8827925 3'utr pyd FlyBase G37074.1 AATTCGATATTGTCTGTTAATTGTGCCTTTAAGTGATCGTTTGGCTCTGCCTCTGAACTATTATATCGAGCTAGAAATTAATCAATCGAATGCAATGGATACTTGTATAAAGCGACTAGAATTTAATTTCATACACAA 48 8827835 0.982303009 23 45 371 0.961038961 1.392110465 0.12987013 0.375 0.61038961 48 1 2 74 3R:8827788-8827925 7 22.5 851 FBgn0262614 694.76 11.98333333 18.49333333 0.032385284 1.877607789 1.21665465 -2 -2 -2 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 3R 8982673 8982680 + 3R_8982673_8982680_+ 0.426855965 0.507420455 0.46713821 0.056967704 CAHbeta FBtr0340014|FBtr0340014|FBtr0340014 8981922|8981922|8981922 8982793|8982793|8982793 3R + 8982587 8982709 3'utr CAHbeta FlyBase G41212.1 GATGAAGACACCGTGGATCGATTGTCCGAGGAGGTCAGAAGATTCTATTCGTAGGCGAAACATGCCAAGAGGACCAAATGGATTATCTGTGATATGTGGGCCTTATACCGCGATCGGCATTTA 144 8982672 0.964113334 14 134 1299 0.93452381 1.894869657 0.107142857 0.118055556 0.244047619 144 10 1 157 3R:8982587-8982709 8 CAHbeta FBtr0340014|FBtr0340014|FBtr0340014 8981922|8981922|8981922 8982793|8982793|8982793 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 8982639 8982699 3'utr CAHbeta FlyBase G31089.1 AGGCGAAACATGCCAAGAGGACCAAATGGATTATCTGTGATATGTGGGCCTTATACCGCGA 97 8982672 0.869174298 11 92 907 0.955128205 1.571126277 0.102564103 0.381443299 0.615384615 97 4 3 149 3R:8982639-8982699 8 113 852 FBgn0037646 43.33333333 4.79 7.23 2.607692308 23.5908142 15.62932227 1 1 1 0.5 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 9020972 9020979 - 3R_9020972_9020979_- 0.585663119 0.576974429 0.581318774 0.006143839 neur FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002|FBtr0300414 9020346|9020346|9020346|9020346|9020721 9021792|9021792|9021792|9021792|9021792 3R - 9020954 9021023 3'utr neur FlyBase G49227.1 GTTTAAAGTTAATATTAGTCTAGCCCTAAGTACTTAAGTTAATTTCTAGTCAACGAATTATGCTGAAGTT 100 9020980 0.98176363 8 93 688 0.936507937 1.594760753 0.03968254 0.18 0.349206349 100 6 2 118 3R:9020954-9021023 8 neur FBtr0300414|FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002 9020721|9020346|9020346|9020346|9020346 9021792|9021792|9021792|9021792|9021792 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R - 9020953 9020989 3'utr neur FlyBase G37163.1 TAAGTTAATTTCTAGTCAACGAATTATGCTGAAGTTA 95 9020980 0.80044952 4 93 619 0.973509934 2.167317335 0.039735099 0.410526316 0.629139073 95 4 0 147 3R:9020953-9020989 8 95.5 853 FBgn0002932 466.07 14.63 22.51666667 0.204904843 6.527682843 4.241302739 1 1 1 0.5 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA 3R 9021265 9021272 - 3R_9021265_9021272_- 0.601775157 0.598824815 0.600299986 0.002086248 neur FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002|FBtr0300414 9020346|9020346|9020346|9020346|9020721 9021792|9021792|9021792|9021792|9021792 3R - 9021251 9021291 3'utr neur FlyBase G49229.1 ATTTGGCGATTAATCATTTTGGTGCTAAATGTTTTGAAAGG 37 9021273 0.723439899 5 37 361 1 1.681241237 0.270833333 0.243243243 0.416666667 37 0 0 48 3R:9021251-9021291 8 neur FBtr0300414|FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002 9020721|9020346|9020346|9020346|9020346 9021792|9021792|9021792|9021792|9021792 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" 3R - 9021250 9021290 3'utr neur FlyBase G37164.1 TTTGGCGATTAATCATTTTGGTGCTAAATGTTTTGAAAGGC 31 9021273 0.725945473 2 31 290 1 1.662757832 0.347826087 0.322580645 0.543478261 31 0 0 46 3R:9021250-9021290 8 34 854 FBgn0002932 466.07 14.63 22.51666667 0.072950415 2.323991798 1.509992598 1 1 1 0.5 dme-miR-11-3p 7mer-m1 TGTGATG 3R 9021555 9021561 - 3R_9021555_9021561_- 0.537919328 0.56839661 0.553157969 0.021550706 neur FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002|FBtr0300414 9020346|9020346|9020346|9020346|9020721 9021792|9021792|9021792|9021792|9021792 3R - 9021504 9021579 3'utr neur FlyBase G49230.1 ACGTATGTTTAATTTTTTTGTGATGTTATAAGTAAGTGCGCCCCAGAGCCAAAACTATGTATTGTTCAATCCAACA 26 9021562 0.804586544 7 22 304 0.866666667 1.113943352 0.233333333 0.115384615 0.233333333 26 3 1 26 3R:9021504-9021579 7 neur FBtr0300414|FBtr0082004|FBtr0082003|FBtr0082001|FBtr0082002 9020721|9020346|9020346|9020346|9020346 9021792|9021792|9021792|9021792|9021792 TGTGATG 7mer-m1 dme-miR-11-3p 3R - 9021503 9021611 3'utr neur FlyBase G37165.1 TTAGTGTATGAAACTATCAACTAATTTATCACACGTATGTTTAATTTTTTTGTGATGTTATAAGTAAGTGCGCCCCAGAGCCAAAACTATGTATTGTTCAATCCAACAA 24 9021563 0.993717466 12 22 268 0.925 1.267171728 0.2 0.5 0.7 24 2 1 37 3R:9021503-9021611 7 20 855 FBgn0002932 466.07 14.63 22.51666667 0.042912009 1.367053999 0.88823094 1 2 1.5 0.5 dme-miR-263a-5p 6mer3-8 GTGCCA 3R 9358416 9358421 + 3R_9358416_9358421_+ 0.562294386 0.464582619 0.513438502 0.069092676 CG45050 FBtr0344364|FBtr0344370|FBtr0344363|FBtr0344367|FBtr0344369|FBtr0344365|FBtr0344368|FBtr0344366 9358403|9358403|9358403|9358403|9358403|9358403|9358403|9358403 9359189|9359189|9362994|9362994|9359189|9362994|9359189|9362994 3R + 9358398 9358516 stop_codon CG45050 FlyBase G41342.2 GATTTGAATTTCGATATTGTGCCAGTAACAGTAACAGTAGCCGTAGAATGATAATAACCAACTACACATGATAAGAGTACATATATATATATATGCTGCGCTATAACAAGGAAAGCAAC 57 9358415 0.973300235 18 53 331 0.9375 1.77815125 0.1875 0.105263158 0.203125 57 4 0 60 3R:9358398-9358516 6 CG45050 FBtr0344367|FBtr0344363|FBtr0344370|FBtr0344364|FBtr0344366|FBtr0344368|FBtr0344365|FBtr0344369 9358403|9358403|9358403|9358403|9358403|9358403|9358403|9358403 9362994|9362994|9359189|9359189|9362994|9359189|9362994|9359189 GTGCCA 6mer3-8 dme-miR-263a-5p 3R + 9358394 9358516 stop_codon CG45050 FlyBase G31201.1 AAAAGATTTGAATTTCGATATTGTGCCAGTAACAGTAACAGTAGCCGTAGAATGATAATAACCAACTACACATGATAAGAGTACATATATATATATATGCTGCGCTATAACAAGGAAAGCAAC 33 9358414 0.970867391 13 31 182 0.944444444 1.707570176 0.222222222 0.484848485 0.685185185 33 3 0 51 3R:9358394-9358516 6 20.5 856 FBgn0266410 13462.35667 672.7966667 1034.65 0.001522765 0.03046983 0.019813463 1 2 1.5 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 9417032 9417038 + 3R_9417032_9417038_+ 0.570459009 0.759573507 0.665016258 0.133724145 alpha-Man-II FBtr0082031|FBtr0082031|FBtr0082031|FBtr0334302|FBtr0334302|FBtr0334302 9416737|9416737|9416737|9416737|9416737|9416737 9417264|9417264|9417264|9417264|9417264|9417264 3R + 9417023 9417061 3'utr alpha-Man-II FlyBase G41367.1 ACGTTTTTTTGTGATATCCATCCAGTCCCACAGCAAGCA 10 9417043 0.954162842 4 10 57 1 1 0.3 0 0 10 0 0 10 3R:9417023-9417061 7 alpha-Man-II FBtr0334302|FBtr0334302|FBtr0334302|FBtr0082031|FBtr0082031|FBtr0082031 9416737|9416737|9416737|9416737|9416737|9416737 9417264|9417264|9417264|9417264|9417264|9417264 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 9417023 9417060 3'utr alpha-Man-II FlyBase G31216.1 ACGTTTTTTTGTGATATCCATCCAGTCCCACAGCAAGC 12 9417031 0.958834939 3 12 90 1 1.255272505 0.166666667 0.5 0.666666667 12 0 0 18 3R:9417023-9417060 7 10.5 857 FBgn0011740 533.3733333 16.09 24.62333333 0.019686024 0.652579242 0.4264248 -11 1 -5 0.5 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA 3R 9446922 9446929 + 3R_9446922_9446929_+ 0.548166931 0.548642971 0.548404951 0.000336654 ps FBtr0082037|FBtr0111030 9446525|9446525 9449468|9449468 3R + 9446714 9446998 3'utr ps FlyBase G41395.1 TAATTTGGCCCTAGAGCCCATTAGACATAGAAACAAAAGCCAAGCAGACACAGGCACATCATTGCAGACTCATTCCAGAGAGAGAAAAGAGGGTACGACTTATTGAGAGAGATATCCCATTCTAAGCATACAACGCATTCCGTGAGACATTCCGATAGACATTCGCAAAGGCTTTCCCAATAAATTCATTGACACTTATAGCGAAATTTCTAGTCAAGTTCTTGCCTCTCACCCATCCGCCAGCATATATGATCCATGATCCATGATCCGTCTTCGATATTGCAC 1093 9446921 0.966116545 44 1050 8281 0.965883245 2.628048173 0.081122062 0.16010979 0.304018196 1093 43 2 1274 3R:9446714-9446998 8 ps FBtr0082037|FBtr0111030 9446525|9446525 9449468|9449468 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" 3R + 9446751 9446954 3'utr ps FlyBase G31242.1 AGCCAAGCAGACACAGGCACATCATTGCAGACTCATTCCAGAGAGAGAAAAGAGGGTACGACTTATTGAGAGAGATATCCCATTCTAAGCATACAACGCATTCCGTGAGACATTCCGATAGACATTCGCAAAGGCTTTCCCAATAAATTCATTGACACTTATAGCGAAATTTCTAGTCAAGTTCTTGCCTCTCACCCATCCGCC 612 9446921 0.982250215 24 587 4363 0.962039046 2.470802365 0.093275488 0.35130719 0.569414317 612 33 2 887 3R:9446751-9446954 8 755 858 FBgn0261552 4666.596667 115.7866667 177.5266667 0.161788141 6.520612621 4.252882196 1 1 1 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 9453053 9453059 + 3R_9453053_9453059_+ 0.792616229 0.767379792 0.77999801 0.01784483 ps FBtr0111032|FBtr0111032|FBtr0111032|FBtr0302692|FBtr0302692|FBtr0302692|FBtr0344283|FBtr0344283|FBtr0344283 9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848 9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500 3R + 9453030 9453070 3'utr ps FlyBase G41419.1 AAGGTATAAAACGTAGTCGTTAGTGTGATAAATAAAATTAA 11 9453051 0.976462237 6 11 78 1 1.113943352 0.076923077 0.181818182 0.307692308 11 0 0 13 3R:9453030-9453070 7 ps FBtr0111032|FBtr0111032|FBtr0111032|FBtr0344283|FBtr0344283|FBtr0344283|FBtr0302692|FBtr0302692|FBtr0302692 9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848|9447848 9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500|9455500 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 9453016 9453071 3'utr ps FlyBase G31258.1 ATACACATACACTAAAGGTATAAAACGTAGTCGTTAGTGTGATAAATAAAATTAAT 8 9453052 0.975598725 4 8 52 1 1.041392685 0.181818182 0.375 0.545454545 8 0 0 11 3R:9453016-9453071 7 8.5 859 FBgn0261552 4666.596667 115.7866667 177.5266667 0.001821456 0.073410871 0.047880131 2 1 1.5 0.5 dme-miR-1008-3p 7mer-A1 GCTGTGA 3R 9507272 9507278 - 3R_9507272_9507278_- 0.395268963 0.406960285 0.401114624 0.008266998 rump FBtr0304684 9505851 9507316 3R - 9507095 9507364 stop_codon rump FlyBase G49398.2 AGAAGCTCAAGCAGGTCTTCAAGCTGGCCGGCAAGGTGCAGAGCGTAGACCTTTCACTGGACAAGGAGGGCAACAGCCGCGGTTTTGCTGTGATCGAGTACGACCATCCGGTGGAGGCTGTTCAGGCCATTTCCATGCTGGATCGTCAGATGCTATTCGACCGTCGTATGACCGTGCGCCTGGACCGAATTCCGGATAAGAATGAAGGCATAAAGCTGCCCGAGGGCTTGGGAGGTGTGGGCATCGGCCTGGGACCCAACGGCGAGCCAC 159 9507280 0.994492437 32 153 828 0.97382199 1.792391689 0.188481675 0.169811321 0.308900524 159 3 2 186 3R:9507095-9507364 7 rump FBtr0304684 9505851 9507316 GCTGTGA 7mer-A1 dme-miR-1008-3p 3R - 9507131 9507318 stop_codon rump FlyBase G37314.1 AGACCTTTCACTGGACAAGGAGGGCAACAGCCGCGGTTTTGCTGTGATCGAGTACGACCATCCGGTGGAGGCTGTTCAGGCCATTTCCATGCTGGATCGTCAGATGCTATTCGACCGTCGTATGACCGTGCGCCTGGACCGAATTCCGGATAAGAATGAAGGCATAAAGCTGCCCGAGGGCTTGGGAG 89 9507280 0.973948721 21 82 503 0.943262411 2.123851641 0.219858156 0.449438202 0.65248227 89 8 0 133 3R:9507131-9507318 7 67.5 860 FBgn0267790 1132.323333 61.17 93.53666667 0.059611948 1.103482099 0.721642137 2 2 2 0.5 dme-miR-11-3p 8mer-m1 CTGTGATG 3R 9536062 9536069 - 3R_9536062_9536069_- 0.25460147 0.268155518 0.261378494 0.009584125 mura FBtr0082116 9535623 9539095 3R - 9536022 9536096 3'utr mura FlyBase G49422.1 ACAAACAAAAAAAATTATAAAGTTTTGCTGTGATGTACGTTATATATATTTAATTACATAAAATGCAATAAAATT 185 9536072 0.991835807 10 178 1989 0.964444444 2.035429738 0.062222222 0.183783784 0.328888889 185 7 1 217 3R:9536022-9536096 8 mura FBtr0082116 9535623 9539095 CTGTGATG 8mer-m1 dme-miR-11-3p 3R - 9536043 9536096 3'utr mura FlyBase G37344.1 ACAAACAAAAAAAATTATAAAGTTTTGCTGTGATGTACGTTATATATATTTAAT 135 9536072 0.891468887 10 128 1418 0.930693069 2.274157849 0.059405941 0.333333333 0.554455446 135 14 0 188 3R:9536043-9536096 8 158.5 861 FBgn0037705 215.4033333 4.16 6.31 0.73582891 38.10096154 25.11885895 3 3 3 0.5 dme-miR-965-3p 7mer-m8 TACGCTT 3R 9575015 9575021 - 3R_9575015_9575021_- 0.485413742 0.501664438 0.49353909 0.01149098 Kap-alpha3 FBtr0301189|FBtr0082108|FBtr0082106|FBtr0082107 9574962|9574482|9574962|9574482 9575473|9575473|9575473|9575473 3R - 9574972 9575075 3'utr Kap-alpha3 FlyBase G49473.1 AGATTTCAAAAAGAATGTAGACCTATTTGATTTATATGAAATTATTTAAATATTTACGCTTCTGATTTGTAATTGAAATTACATATGTATACATTTCTAACATG 76 9575022 0.990178922 12 76 761 1 1.954242509 0.033333333 0.171052632 0.3 76 0 0 90 3R:9574972-9575075 7 Kap-alpha3 FBtr0082108|FBtr0301189|FBtr0082107|FBtr0082106 9574482|9574962|9574482|9574962 9575473|9575473|9575473|9575473 TACGCTT 7mer-m8 dme-miR-965-3p 3R - 9574992 9575070 3'utr Kap-alpha3 FlyBase G37387.1 TCAAAAAGAATGTAGACCTATTTGATTTATATGAAATTATTTAAATATTTACGCTTCTGATTTGTAATTGAAATTACAT 36 9575022 0.843972863 10 35 331 0.955555556 1.633468456 0.044444444 0.25 0.4 36 2 0 43 3R:9574992-9575070 7 47 862 FBgn0027338 3256.33 173.6 265.9533333 0.014433427 0.270737327 0.176722733 1 1 1 0.5 dme-miR-92b-3p 8mer-A1 GTGCAATA 3R 9686731 9686738 + 3R_9686731_9686738_+ 0.495394511 0.445883342 0.470638927 0.035009705 CG18542 FBtr0082084 9686716 9687141 3R + 9686685 9686757 stop_codon CG18542 FlyBase G41532.1 ACCGACGGAGCAGCTTTGCACAAGCAAAACTAGTGCGTTACCAATGGTGCAATATAGATGATAGATAAATGGA 47 9686729 0.978039317 6 46 295 0.981132075 1.716003344 0.094339623 0.127659574 0.226415094 47 1 0 52 3R:9686685-9686757 8 CG18542 FBtr0082084 9686716 9687141 GTGCAATA 8mer-A1 dme-miR-92b-3p 3R + 9686716 9686771 stop_codon CG18542 FlyBase G31333.1 AGTGCGTTACCAATGGTGCAATATAGATGATAGATAAATGGATTCTGTGGAATCTT 16 9686729 0.976444182 2 16 112 1 1.447158031 0.178571429 0.4375 0.678571429 16 0 0 28 3R:9686716-9686771 8 29 863 FBgn0037731 342.2866667 33.38666667 51.05666667 0.084724305 0.868610224 0.567996344 2 2 2 0.5 dme-miR-190-5p 6mer3-8 ACATAT 3R 9694136 9694141 + 3R_9694136_9694141_+ 0.909295622 0.792258405 0.850777014 0.082757798 CG32939 FBtr0082085 9694036 9694461 3R + 9694100 9694204 3'utr CG32939 FlyBase G41538.1 TTTACGTATTTATTCTGTGAACTTTACATTCCAGTCACATATTGCGTCCCGAACTCAAATCACACCGAATTATGCCCTTGATGGCGTTTCTTTATCGATTCGACA 87 9694128 0.979524128 7 78 548 0.887850467 1.977723605 0 0.172413793 0.327102804 87 12 0 95 3R:9694100-9694204 6 CG32939 FBtr0082085 9694036 9694461 ACATAT 6mer3-8 dme-miR-190-5p 3R + 9694114 9694159 3'utr CG32939 FlyBase G31337.1 CTGTGAACTTTACATTCCAGTCACATATTGCGTCCCGAACTCAAAT 64 9694128 0.731084878 6 54 370 0.901098901 1.612783857 0 0.3125 0.516483516 64 8 1 82 3R:9694114-9694159 6 71.5 864 FBgn0052939 2.536666667 0.266666667 0.413333333 28.18659658 268.125 172.983871 8 8 8 0.5 dme-miR-1006-3p 6mer2-7 GAATTT 3R 9766043 9766048 + 3R_9766043_9766048_+ 0.956684875 0.987398763 0.972041819 0.021718007 CG8478 FBtr0301870|FBtr0301871|FBtr0332171|FBtr0082133 9765837|9765837|9765837|9765837 9766135|9766135|9766135|9766135 3R + 9766007 9766075 3'utr CG8478 FlyBase G41600.1 ATTGTACACTTCAGCTGCACGACTGGACTGCTTTGTGAATTTTTTAGGTTTTCGTATGACATTCACACA 25 9766046 0.790926277 10 24 204 0.962962963 1.414973348 0.111111111 0.08 0.148148148 25 1 0 26 3R:9766007-9766075 6 CG8478 FBtr0332171|FBtr0082133|FBtr0301870|FBtr0301871 9765837|9765837|9765837|9765837 9766135|9766135|9766135|9766135 GAATTT 6mer2-7 dme-miR-1006-3p 3R + 9765987 9766062 3'utr CG8478 FlyBase G31383.1 GGTTACTCGAATGCTTATTAATTGTACACTTCAGCTGCACGACTGGACTGCTTTGTGAATTTTTTAGGTTTTCGTA 16 9766038 0.98730842 8 15 143 1 1.380211242 0.208333333 0.375 0.583333333 16 0 0 24 3R:9765987-9766062 6 11 865 FBgn0037746 785.14 44.18333333 67.65666667 0.01401024 0.248962656 0.162585604 -3 5 1 0.5 dme-miR-980-3p 7mer-m8 GGCAGCT 3R 9766376 9766382 - 3R_9766376_9766382_- 0.521229901 0.52456476 0.52289733 0.00235813 MED6 FBtr0301873|FBtr0339719|FBtr0082161|FBtr0082162|FBtr0301872 9766029|9766029|9766029|9766029|9766029 9766440|9766440|9766440|9766440|9766440 3R - 9766349 9766399 3'utr MED6 FlyBase G49653.1 ATTAGTCCGAGTCCTTTGGCAGCTGCATAAAAGGCGCTGAATGCTGCCTGC 41 9766383 0.974589705 4 40 246 0.97826087 1.653212514 0.239130435 0.12195122 0.217391304 41 1 0 45 3R:9766349-9766399 7 MED6 FBtr0339719|FBtr0082161|FBtr0082162|FBtr0301872|FBtr0301873 9766029|9766029|9766029|9766029|9766029 9766440|9766440|9766440|9766440|9766440 GGCAGCT 7mer-m8 dme-miR-980-3p 3R - 9766345 9766399 3'utr MED6 FlyBase G37544.1 ATTAGTCCGAGTCCTTTGGCAGCTGCATAAAAGGCGCTGAATGCTGCCTGCATTT 37 9766384 0.972933767 5 36 218 0.981132075 1.716003344 0.188679245 0.324324324 0.528301887 37 1 0 52 3R:9766345-9766399 7 38 866 FBgn0024330 320.2133333 23.55 36.04333333 0.118670886 1.61358811 1.054286507 1 2 1.5 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 3R 9779385 9779391 + 3R_9779385_9779391_+ 0.731148356 0.733604198 0.732376277 0.001736513 RpS29 FBtr0334681|FBtr0334681|FBtr0334681 9778784|9778784|9778784 9779528|9779528|9779528 3R + 9779349 9779428 3'utr RpS29 FlyBase G41613.1 CACCAGTTGCATAAAGGCTTTTGATGCGGACTTTGATGTGATATGCAAAACTGGCAGGCCACTGAACCCATTTTTTATAT 31 9779369 0.979946844 11 31 217 1 1.544068044 0.257142857 0.129032258 0.228571429 31 0 0 35 3R:9779349-9779428 7 RpS29 FBtr0334681|FBtr0334681|FBtr0334681 9778784|9778784|9778784 9779528|9779528|9779528 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 3R + 9779353 9779398 3'utr RpS29 FlyBase G31401.1 AGTTGCATAAAGGCTTTTGATGCGGACTTTGATGTGATATGCAAAA 21 9779382 0.937852622 9 20 150 0.911764706 1.491361694 0.088235294 0.333333333 0.588235294 21 3 0 31 3R:9779353-9779398 7 17 867 FBgn0261599 23525.90667 6343.63 9678.496667 0.000722608 0.002679854 0.001756471 16 3 9.5 0.5 dme-miR-283-5p 8mer-A1 TGATATTA 3R 9788236 9788243 + 3R_9788236_9788243_+ 0.489105061 0.355675105 0.422390083 0.094349258 CG8500 FBtr0082139 9786856 9789323 3R + 9788207 9788337 3'utr CG8500 FlyBase G41626.1 CAAATTGTTTCGCATAGTTTGCTGTTGTTTGATATTAAGAGGATAAGTTTTTTTAAATTTTACCAATCGGACTAAGTGAATGATATGCTTTAAACGCTGCTATACCAATTAGCCAAATAGAGGGGCATGTA 19 9788234 0.991101359 15 19 193 1 1.322219295 0.380952381 0.105263158 0.19047619 19 0 0 21 3R:9788207-9788337 8 CG8500 FBtr0082139 9786856 9789323 TGATATTA 8mer-A1 dme-miR-283-5p 3R + 9788216 9788248 3'utr CG8500 FlyBase G31416.1 TCGCATAGTTTGCTGTTGTTTGATATTAAGAGG 7 9788234 0.637901778 5 7 69 1 0.954242509 0.555555556 0.285714286 0.444444444 7 0 0 9 3R:9788216-9788248 8 9 868 FBgn0037754 1099.76 38.82 59.79333333 0.008183604 0.231839258 0.150518452 2 2 2 0.5 dme-miR-252-5p 8mer-A1 GTACTTAA 3R 9789276 9789283 - 3R_9789276_9789283_- 0.369021293 0.367200369 0.368110831 0.001287571 CG12945 FBtr0113214|FBtr0334685 9788850|9788850 9789429|9789429 3R - 9789239 9789309 3'utr CG12945 FlyBase G49669.1 AAATTTTTATTTAAATTATTTTGCATGTACTTAATCTCATTTGCGCGATAAGTGTTATTAAGATAAATCTT 133 9789284 0.743506749 15 127 1299 0.968152866 2.181843588 0.038216561 0.135338346 0.267515924 133 5 0 152 3R:9789239-9789309 8 CG12945 FBtr0334685|FBtr0113214 9788850|9788850 9789429|9789429 GTACTTAA 8mer-A1 dme-miR-252-5p 3R - 9789241 9789307 3'utr CG12945 FlyBase G37556.2 ATTTTTATTTAAATTATTTTGCATGTACTTAATCTCATTTGCGCGATAAGTGTTATTAAGATAAATC 85 9789284 0.738066613 12 82 763 0.9609375 1.788875116 0.09375 0.364705882 0.578125 85 4 1 123 3R:9789241-9789307 8 100 869 FBgn0037755 425.2633333 24.99 38.05666667 0.235148418 4.00160064 2.627660506 1 1 1 0.5 dme-miR-1012-3p 6mer3-8 TTGACT 4 1034707 1034712 + 4_1034707_1034712_+ 0.553321647 0.596794169 0.575057908 0.03073977 ATPsyn-beta FBtr0344754 1034412 1034917 4 + 1034691 1034731 3'utr ATPsyn-beta FlyBase G56605.1 ACACTATGTTATCATTTTGACTGACTGTCGAAAATAAACCA 17 1034706 0.666028667 8 16 152 1 1.301029996 0.15 0.176470588 0.3 17 0 0 20 4:1034691-1034731 6 ATPsyn-beta FBtr0344754 1034412 1034917 TTGACT 6mer3-8 dme-miR-1012-3p 4 + 1034678 1034723 3'utr ATPsyn-beta FlyBase G42754.1 TATATTAAAAATTACACTATGTTATCATTTTGACTGACTGTCGAAA 14 1034707 0.987529492 5 14 129 1 1.230448921 0.411764706 0.214285714 0.352941176 14 0 0 17 4:1034678-1034723 6 15 870 FBgn0010217 4002.656667 288.0533333 441.7933333 0.003747511 0.05207369 0.033952527 1 0 0.5 0.5 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 4 1035750 1035756 - 4_1035750_1035756_- 0.663125839 0.664827469 0.663976654 0.001203284 CaMKII FBtr0333673|FBtr0300378|FBtr0333674|FBtr0089218|FBtr0333675|FBtr0089219|FBtr0089217|FBtr0100146|FBtr0100148|FBtr0100147 1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286 1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277 4 - 1035744 1035786 3'utr CaMKII FlyBase G57302.1 ACTTAATCATTGTGAAATGATTATACATTTTACCTGATAGTAC 8 1035758 0.756657061 3 7 90 0.888888889 0.602059991 0 0.125 0.222222222 8 0 1 8 4:1035744-1035786 7 CaMKII FBtr0089217|FBtr0100146|FBtr0100148|FBtr0100147|FBtr0333675|FBtr0089219|FBtr0333674|FBtr0089218|FBtr0333673|FBtr0300378 1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286|1035286 1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277|1037277 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 4 - 1035715 1035774 3'utr CaMKII FlyBase G43304.1 TGAAATGATTATACATTTTACCTGATAGTACATGTTAAAAAAAAACTTGGACTTAAACAC 11 1035758 0.858366592 4 10 74 1 1.079181246 0.083333333 0.090909091 0.166666667 11 0 0 12 4:1035715-1035774 7 6.5 871 FBgn0264607 1116.67 52.21333333 80.09666667 0.005820878 0.124489275 0.081151941 2 2 2 0.5 dme-miR-31a-5p 7mer-A1 CTTGCCA 4 108935 108941 + 4_108935_108941_+ 0.671399178 0.820700539 0.746049858 0.105571962 pan FBtr0309803|FBtr0100245|FBtr0308615|FBtr0089162|FBtr0112657|FBtr0089161 108491|108491|104412|108491|108491|108491 114270|109770|110059|110059|110059|110059 4 + 108877 108953 3'utr pan FlyBase G56198.1 TCTATTTATTTAGCTTAACACAACCAAATTATGTATTTTATTTTAAAATTAGACACAACTTGCCAAAATCCATTAAT 14 108914 0.98663349 9 13 118 0.928571429 1.113943352 0 0 0 14 1 0 13 4:108877-108953 7 pan FBtr0089161|FBtr0089162|FBtr0112657|FBtr0308615|FBtr0309803|FBtr0100245 108491|108491|108491|104412|108491|108491 110059|110059|110059|110059|114270|109770 CTTGCCA 7mer-A1 dme-miR-31a-5p 4 + 108896 108947 3'utr pan FlyBase G42426.1 ACAACCAAATTATGTATTTTATTTTAAAATTAGACACAACTTGCCAAAATCC 7 108905 0.933265951 5 6 51 1 1 0 0.285714286 0.5 7 0 0 10 4:108896-108947 7 4 872 FBgn0085432 3045.83 84.67333333 129.51 0.001313271 0.047240375 0.030885646 21 30 25.5 0.5 dme-miR-184-3p 7mer-m8 TCCGTCC 4 1115354 1115360 - 4_1115354_1115360_- 0.585144799 0.596852546 0.590998672 0.008278594 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 4 - 1115271 1115478 3'utr Cals FlyBase G57338.1 AAATATACACATAAGATCTATTTAATTTATAGTTTGTCAGCCCTCACCTTAAGATGTAAAATGCACATGTCTACCAAATTTCAACTGAATTCTGTCGCAATGCATAGGAGGAAGTTTCTCCGTCCCAATAATTTAAGCCTAATAATAAAACATAAAAAAAATTTGAAATGGATCGTAATACCCAAACAATGTTGACTTATTTAATAAA 253 1115361 0.983445027 36 232 1788 0.918644068 1.8309093 0.088135593 0.134387352 0.257627119 253 21 3 271 4:1115271-1115478 7 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 TCCGTCC 7mer-m8 dme-miR-184-3p 4 - 1115338 1115477 3'utr Cals FlyBase G43326.1 AATATACACATAAGATCTATTTAATTTATAGTTTGTCAGCCCTCACCTTAAGATGTAAAATGCACATGTCTACCAAATTTCAACTGAATTCTGTCGCAATGCATAGGAGGAAGTTTCTCCGTCCCAATAATTTAAGCCTA 119 1115361 0.82768637 25 108 801 0.926966292 2.217483944 0.078651685 0.361344538 0.573033708 119 13 0 165 4:1115338-1115477 7 68 873 FBgn0039928 3212.163333 100.7466667 154.9366667 0.021169534 0.674960296 0.438889008 1 1 1 0.5 dme-miR-305-5p 8mer-m1 AGTACAAT 4 1115532 1115539 - 4_1115532_1115539_- 0.552766403 0.561885109 0.557325756 0.006447895 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 4 - 1115501 1115556 3'utr Cals FlyBase G57339.1 AAATATAGCTAAGGTATAGTACAATTATTATGTAACCAGCGTCGCTAGATCCATAA 15 1115531 0.721025649 5 12 107 0.85 1.230448921 0.05 0.266666667 0.45 15 3 0 17 4:1115501-1115556 8 Cals FBtr0089207|FBtr0333700|FBtr0345193|FBtr0089208 1115253|1115253|1112872|1115077 1115826|1115826|1115826|1115826 AGTACAAT 8mer-m1 dme-miR-305-5p 4 - 1115511 1115558 3'utr Cals FlyBase G43327.1 AAAAATATAGCTAAGGTATAGTACAATTATTATGTAACCAGCGTCGCT 11 1115531 0.724160438 7 8 75 0.769230769 1 0.076923077 0.181818182 0.307692308 11 3 0 10 4:1115511-1115558 8 8.5 874 FBgn0039928 3212.163333 100.7466667 154.9366667 0.002646192 0.084370037 0.054861126 -8 -8 -8 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA 4 112846 112853 + 4_112846_112853_+ 0.604104053 0.616315588 0.61020982 0.008634834 pan FBtr0309803|FBtr0309803|FBtr0309803 108491|108491|108491 114270|114270|114270 4 + 112824 112867 3'utr pan FlyBase G56212.1 TAGAAATTCAACAAATACACTGCTGTGATAAATCTAATTAACGA 28 112844 0.834744802 3 26 167 0.933333333 1.447158031 0 0.071428571 0.133333333 28 2 0 28 4:112824-112867 8 pan FBtr0309803|FBtr0309803|FBtr0309803 108491|108491|108491 114270|114270|114270 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 4 + 112812 112859 3'utr pan FlyBase G42442.1 TTACATCAAGTTTAGAAATTCAACAAATACACTGCTGTGATAAATCTA 17 112844 0.977483512 5 16 107 0.966666667 1.462397998 0 0.411764706 0.666666667 17 1 0 29 4:112812-112859 8 21.5 875 FBgn0085432 3045.83 84.67333333 129.51 0.007058831 0.253917014 0.166010347 2 2 2 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA 4 1223688 1223694 + 4_1223688_1223694_+ 0.724181803 0.69164256 0.707912182 0.023008689 Mitf FBtr0307326|FBtr0307326|FBtr0307326|FBtr0307329|FBtr0307329|FBtr0307329 1222790|1222790|1222790|1222790|1222790|1222790 1224467|1224467|1224467|1224467|1224467|1224467 4 + 1223622 1223708 3'utr Mitf FlyBase G56629.1 ATGATTCGTTAAAGTTGTCCGATCTTCATGAGTGCTACAGCATTGAAAATGTAGTCCAAAAACTAATGTGATAATATAATAAGAACT 33 1223685 0.863521711 12 30 222 0.95 1.579783597 0.25 0.212121212 0.35 33 2 0 38 4:1223622-1223708 7 Mitf FBtr0307326|FBtr0307326|FBtr0307326|FBtr0307329|FBtr0307329|FBtr0307329 1222790|1222790|1222790|1222790|1222790|1222790 1224467|1224467|1224467|1224467|1224467|1224467 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" 4 + 1223629 1223711 3'utr Mitf FlyBase G42779.1 GTTAAAGTTGTCCGATCTTCATGAGTGCTACAGCATTGAAAATGTAGTCCAAAAACTAATGTGATAATATAATAAGAACTTAA 23 1223686 0.971937342 7 22 149 0.971428571 1.230448921 0.085714286 0.391304348 0.6 23 0 1 34 4:1223629-1223711 7 15.5 876 FBgn0263112 1506.45 56.91333333 87.3 0.01028909 0.272343915 0.177548683 3 2 2.5 0.5 dme-miR-276a-3p 8mer-A1 AGTTCCTA 4 142899 142906 + 4_142899_142906_+ 0.621404842 0.627903864 0.624654353 0.004595558 CG32000 FBtr0089451|FBtr0089448|FBtr0089449|FBtr0333161|FBtr0113417 142794|142794|142794|142794|142794 143123|143123|143123|143123|143123 4 + 142850 143089 3'utr CG32000 FlyBase G56253.1 TTAGGAATTTCCATTATTAATACAGTAGAAAATGTAGGCAAAATTATTTAGTTCCTATTTAGTTTTTTTAGTAATCTTAGTATTTCTAATTGTACTTACATCAAAGATAACTTTGTATTAGCTATGAACACTTTTGTCTTTCTATGTTTAAAACGGCGTTGTTTCTTGATTATAATTAAGTGTTTGATGTTTATATACATAAGCAAAAATTCATATAGGCTGTATAATAAGCATTGGAGT 206 142897 0.934845437 41 188 2096 0.92519685 1.893946608 0.165354331 0.175609756 0.334645669 205 17 2 235 4:142850-143089 8 CG32000 FBtr0089451|FBtr0113417|FBtr0333161|FBtr0089449|FBtr0089448 142794|142794|142794|142794|142794 143123|143123|143123|143123|143123 AGTTCCTA 8mer-A1 dme-miR-276a-3p 4 + 142845 143032 3'utr CG32000 FlyBase G42466.1 TACTTTTAGGAATTTCCATTATTAATACAGTAGAAAATGTAGGCAAAATTATTTAGTTCCTATTTAGTTTTTTTAGTAATCTTAGTATTTCTAATTGTACTTACATCAAAGATAACTTTGTATTAGCTATGAACACTTTTGTCTTTCTATGTTTAAAACGGCGTTGTTTCTTGATTATAATTAAGTGT 105 142897 0.992228598 31 98 1136 0.944099379 2.181843588 0.198757764 0.40952381 0.614906832 105 9 0 152 4:142845-143032 8 41.5 877 FBgn0052000 5598.68 138.82 213.5633333 0.007412462 0.298948278 0.194321747 2 2 2 0.5 dme-miR-184-5p 7mer-A1 GATAAGA 4 212845 212851 + 4_212845_212851_+ 0.489036492 0.507308273 0.498172383 0.012920114 Crk FBtr0304871|FBtr0345065|FBtr0345064 212179|211892|212726 213165|213165|213165 4 + 212792 212878 3'utr Crk FlyBase G56261.1 GAAAACTACCTGCATACGCCCGCGTAAAACAGTCAAGGGTCCCTAACGCATACGATAAGACTGCATTAAAATTGGAAATAGGTGACA 126 212847 0.919134827 9 108 609 0.873417722 1.838849091 0.03164557 0.222222222 0.379746835 126 19 1 138 4:212792-212878 7 Crk FBtr0304871|FBtr0345065|FBtr0345064 212179|211892|212726 213165|213165|213165 GATAAGA 7mer-A1 dme-miR-184-5p 4 + 212827 212867 3'utr Crk FlyBase G42475.1 AGGGTCCCTAACGCATACGATAAGACTGCATTAAAATTGGA 68 212847 0.775801572 6 58 303 0.846153846 1.467361417 0 0.352941176 0.576923077 68 14 2 88 4:212827-212867 7 90 878 FBgn0024811 1520.34 187.5933333 288.2066667 0.059197285 0.479761186 0.312275913 -2 -2 -2 0.5 dme-miR-252-5p 6mer3-8 GTACTT 4 310320 310325 + 4_310320_310325_+ 0.52944432 0.554301089 0.541872704 0.017576412 Rad23 FBtr0333679 310188 310822 4 + 310206 310340 3'utr Rad23 FlyBase G56282.1 AAGTTATGCAAATAACACCGGAAGCGTTACATTTAAAGTTAGATGTTCTTAAATTAAATGTAAAATGTCGATCATAAAAATTCTTTTATATTCTTTTAATACCGTCGGCGTATTGTACTTGTTATTTGTTAAAAA 38 310319 0.988544205 14 38 337 1 1.662757832 0.130434783 0.131578947 0.282608696 38 0 0 46 4:310206-310340 6 Rad23 FBtr0333679 310188 310822 GTACTT 6mer3-8 dme-miR-252-5p 4 + 310301 310341 3'utr Rad23 FlyBase G42496.1 TTAATACCGTCGGCGTATTGTACTTGTTATTTGTTAAAAAT 15 310319 0.735361194 6 12 167 0.866666667 0.937852093 0.033333333 0.733333333 0.866666667 15 2 2 26 4:310301-310341 6 19.5 879 FBgn0026777 1534.613333 122.59 187.9666667 0.012706784 0.159066808 0.103741798 1 1 1 0.5 dme-miR-304-5p 6mer2-7 GAGATT 4 311138 311143 - 4_311138_311143_- 0.974497065 0.999395517 0.986946291 0.017605827 Zip102B FBtr0089133|FBtr0340652|FBtr0340653|FBtr0333681 310928|310928|310928|310928 312789|312789|312789|312789 4 - 311063 311237 3'utr Zip102B FlyBase G56795.1 TAATTCTTGTGTCTTTGAATCTACATTGAGTCAGGAAAGATTTATAATTGTAGCAACATTATAGAGGGGACCATAGCCATACATGAAACTATTAGAGATTTATTAATATTAAAGTGTAGAATTCTTTGCATTAATAATGCATATTACAATGTTCGAGTTTTATATTTGTCGTATT 29 311157 0.989731084 11 23 231 0.84375 1.130333768 0.15625 0.103448276 0.1875 29 4 1 27 4:311063-311237 6 Zip102B FBtr0333681|FBtr0340653|FBtr0340652|FBtr0089133 310928|310928|310928|310928 312789|312789|312789|312789 GAGATT 6mer2-7 dme-miR-304-5p 4 - 311110 311180 3'utr Zip102B FlyBase G42903.1 ATTATAGAGGGGACCATAGCCATACATGAAACTATTAGAGATTTATTAATATTAAAGTGTAGAATTCTTTG 12 311153 0.980001397 8 11 84 0.8125 1.113943352 0.125 0.25 0.4375 12 3 0 13 4:311110-311180 6 9 880 FBgn0039902 844.14 35.44333333 54.17 0.010661739 0.253926455 0.166143622 14 10 12 0.5 dme-miR-965-3p 6mer3-8 TACGCT 4 372497 372502 + 4_372497_372502_+ 0.701216511 0.987097812 0.844157162 0.202148606 Hcf FBtr0334479|FBtr0345284|FBtr0089126|FBtr0089125|FBtr0307379 372391|372391|372391|372391|372391 372784|375554|372784|374973|372784 4 + 372451 372540 3'utr Hcf FlyBase G56327.1 AAAGTATGCTATTAGCTTTTCCGTTTTTACAGCTTCCAATAGACTTTACGCTGAATTCAAAATGATTACAACGAAACTTGAATATTATTG 56 372490 0.794175169 8 55 386 0.98630137 1.857332496 0.150684932 0.196428571 0.383561644 56 1 0 72 4:372451-372540 6 Hcf FBtr0089125|FBtr0307379|FBtr0345284|FBtr0089126|FBtr0334479 372391|372391|372391|372391|372391 374973|372784|375554|372784|372784 TACGCT 6mer3-8 dme-miR-965-3p 4 + 372476 372547 3'utr Hcf FlyBase G42525.1 TTTACAGCTTCCAATAGACTTTACGCTGAATTCAAAATGATTACAACGAAACTTGAATATTATTGCTATTAA 30 372491 0.980375031 7 28 199 0.956521739 1.643452676 0.152173913 0.333333333 0.565217391 30 2 0 44 4:372476-372547 6 38 881 FBgn0039904 2694.423333 58.45333333 89.53333333 0.014103203 0.650091241 0.424422934 7 6 6.5 0.5 dme-miR-1012-3p 6mer3-8 TTGACT 4 453799 453804 + 4_453799_453804_+ 0.628017421 0.755489934 0.691753677 0.090136669 CaMKI FBtr0089067|FBtr0333670|FBtr0089069|FBtr0089063|FBtr0089065 453198|453198|453198|453198|453198 453947|453947|453947|453947|453947 4 + 453778 453827 3'utr CaMKI FlyBase G56346.1 TCTTAAGCAGATGATTTGGTGTTGACTGGAAATTTTTAGTATTAAGATGT 13 453799 0.963684023 8 9 124 0.75 0.602059991 0.25 0.153846154 0.3125 13 2 2 12 4:453778-453827 6 CaMKI FBtr0089065|FBtr0089063|FBtr0089069|FBtr0333670|FBtr0089067 453198|453198|453198|453198|453198 453947|453947|453947|453947|453947 TTGACT 6mer3-8 dme-miR-1012-3p 4 + 453782 453826 3'utr CaMKI FlyBase G42539.1 AAGCAGATGATTTGGTGTTGACTGGAAATTTTTAGTATTAAGATG 10 453797 0.643485661 7 9 99 0.944444444 1.230448921 0.388888889 0.5 0.722222222 10 1 0 17 4:453782-453826 6 10 882 FBgn0016126 937.6466667 46.26 70.96333333 0.010664998 0.216169477 0.140917845 0 2 1 0.5 dme-miR-184-3p 7mer-m8 TCCGTCC 4 542001 542007 - 4_542001_542007_- 0.445605561 0.439801049 0.442703305 0.004104472 Thd1 FBtr0345197|FBtr0333706 538330|540558 545662|545662 4 - 541984 542027 3'utr Thd1 FlyBase G56931.1 ATCGAGTCGAACTGGCCATTTCCGTCCGTCTGAGGGCTCATCTT 36 542008 0.753355223 4 35 258 0.976190476 1.612783857 0.238095238 0.166666667 0.285714286 36 1 0 41 4:541984-542027 7 Thd1 FBtr0333706|FBtr0345197 540558|538330 545662|545662 TCCGTCC 7mer-m8 dme-miR-184-3p 4 - 541984 542025 3'utr Thd1 FlyBase G42999.1 CGAGTCGAACTGGCCATTTCCGTCCGTCTGAGGGCTCATCTT 22 542008 0.762194712 3 22 158 1 1.477121255 0.233333333 0.318181818 0.5 22 0 0 30 4:541984-542025 7 29 883 FBgn0026869 3486.926667 66.67 102.3333333 0.008316779 0.434978251 0.283387622 1 1 1 0.5 dme-miR-252-5p 8mer-A1 GTACTTAA 4 545346 545353 - 4_545346_545353_- 0.440841085 0.430200209 0.435520647 0.007524253 Thd1 FBtr0345197|FBtr0089106|FBtr0333706 538330|545266|540558 545662|545662|545662 4 - 545333 545368 3'utr Thd1 FlyBase G56939.2 CCGAAACAATTGTTTGTACTTAAATCATTTAAGCAT 53 545354 0.697814862 4 48 487 0.938461538 1.785329835 0.076923077 0.188679245 0.338461538 53 4 0 61 4:545333-545368 8 Thd1 FBtr0333706|FBtr0345197 540558|538330 545662|545662 GTACTTAA 8mer-A1 dme-miR-252-5p 4 - 545266 545372 3'utr Thd1 FlyBase G43004.1 GATCCCGAAACAATTGTTTGTACTTAAATCATTTAAGCATACTTTATTTTACTCACACACAAATATTGCGAAACTTACTAGTATATAATAAAGTTTTAAAATAATAA 41 545354 0.978728484 10 38 385 0.927272727 1.40654018 0.163636364 0.268292683 0.454545455 41 3 1 51 4:545266-545372 8 41.5 884 FBgn0026869 3486.926667 66.67 102.3333333 0.011901598 0.622468877 0.405537459 1 1 1 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT 4 566727 566732 + 4_566727_566732_+ 0.636408061 0.674149378 0.655278719 0.026687129 Pur-alpha FBtr0310640|FBtr0310640|FBtr0310640|FBtr0089993|FBtr0089993|FBtr0089993|FBtr0310638|FBtr0310638|FBtr0310638 565755|565755|565755|565755|565755|565755|565755|565755|565755 567257|567257|567257|567257|567257|567257|567257|567257|567257 4 + 566697 566788 3'utr Pur-alpha FlyBase G56466.1 CCTAAACTCGTTTTTAAAACAAAAGTTTCATGTGATCACGTAGAATAAAAACTTACTAAGTACGATGAACATGCATAGCAAAATAACAACAT 166 566724 0.92125605 13 145 1139 0.875 1.604765885 0.130434783 0.096385542 0.184782609 166 20 3 161 4:566697-566788 6 Pur-alpha FBtr0310640|FBtr0310640|FBtr0310640|FBtr0310638|FBtr0310638|FBtr0310638|FBtr0089993|FBtr0089993|FBtr0089993 565755|565755|565755|565755|565755|565755|565755|565755|565755 567257|567257|567257|567257|567257|567257|567257|567257|567257 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" 4 + 566700 566766 3'utr Pur-alpha FlyBase G42642.1 AAACTCGTTTTTAAAACAAAAGTTTCATGTGATCACGTAGAATAAAAACTTACTAAGTACGATGAAC 99 566724 0.98569285 7 79 673 0.817567568 1.605664116 0.101351351 0.333333333 0.554054054 99 25 2 121 4:566700-566766 6 124.5 885 FBgn0022361 255.0033333 15.47333333 23.55666667 0.488228912 8.046100819 5.28512806 3 3 3 0.5 "dme-miR-275-3p,dme-miR-306-5p" 7mer-A1 TACCTGA 4 577873 577879 + 4_577873_577879_+ 0.782379785 0.675049804 0.728714794 0.075893771 Ephrin FBtr0089076|FBtr0089077|FBtr0089075 577321|577321|577321 578143|580122|578143 4 + 577861 577903 3'utr Ephrin FlyBase G56490.1 CAGCTATATTTTTACCTGACTTCGCGTCTATTAGCTAAAATGA 8 577871 0.868935113 4 6 55 0.777777778 0.84509804 0.222222222 0.125 0.222222222 8 2 0 7 4:577861-577903 7 Ephrin FBtr0089077|FBtr0089075|FBtr0089076 577321|577321|577321 580122|578143|578143 TACCTGA 7mer-A1 "dme-miR-275-3p,dme-miR-306-5p" 4 + 577860 577890 3'utr Ephrin FlyBase G42658.1 ACAGCTATATTTTTACCTGACTTCGCGTCTA 7 577871 0.675684281 2 7 63 1 1.146128036 0 0.714285714 0.857142857 7 0 0 14 4:577860-577890 7 6.5 886 FBgn0040324 1976.393333 63.49666667 97.38666667 0.003288819 0.102367578 0.06674425 2 2 2 0.5 dme-miR-307a-3p 7mer-A1 GTTGTGA 4 620793 620799 + 4_620793_620799_+ 0.613506757 0.615202407 0.614354582 0.00119897 Eph FBtr0089086|FBtr0089082|FBtr0089084|FBtr0089083 620357|620357|620357|620357 622470|620926|620926|620926 4 + 620680 620838 3'utr Eph FlyBase G56528.1 TATACCTTATATATCAATGTGTACCAATTATTTATTATACGAACAATTTTCAAGCTTATTATTATAAGAGTTTAGAGGCGCTATGATTGCCTTGCTATATTTTACCTTTTTTTGTTGTGATAGAAGTGGAATTAAAGAACTATTCATCTTTATTAGATT 190 620793 0.822310191 33 182 2146 0.960352423 1.639486489 0.383259912 0.163157895 0.299559471 190 5 4 218 4:620680-620838 7 Eph FBtr0089084|FBtr0089083|FBtr0089082|FBtr0089086 620357|620357|620357|620357 620926|620926|620926|622470 GTTGTGA 7mer-A1 dme-miR-307a-3p 4 + 620717 620882 3'utr Eph FlyBase G42688.1 TACGAACAATTTTCAAGCTTATTATTATAAGAGTTTAGAGGCGCTATGATTGCCTTGCTATATTTTACCTTTTTTTGTTGTGATAGAAGTGGAATTAAAGAACTATTCATCTTTATTAGATTATATTTCATGGTTTACTTTGCATAAAATAGTGAAAAACTCAATA 101 620793 0.992723967 25 93 1080 0.925170068 1.531478917 0.31292517 0.326732673 0.537414966 101 8 3 136 4:620717-620882 7 103 887 FBgn0025936 2044.833333 61.14666667 93.30666667 0.050370853 1.684474488 1.103886825 0 0 0 0.5 dme-miR-317-3p 6mer3-8 TGTGTT 4 687363 687368 + 4_687363_687368_+ 0.911648786 0.908025011 0.909836899 0.002562414 CG11360 FBtr0089091|FBtr0310540|FBtr0310539|FBtr0310541 686039|686039|686039|686039 689595|687565|690650|687565 4 + 687347 687383 3'utr CG11360 FlyBase G56564.1 GATATAAAAATTTTTCTGTGTTTTAGGAAGTCATCTA 16 687360 0.697213565 7 14 171 0.9 1.255272505 0.25 0.1875 0.35 16 2 0 18 4:687347-687383 6 CG11360 FBtr0310541|FBtr0310539|FBtr0310540|FBtr0089091 686039|686039|686039|686039 687565|690650|687565|689595 TGTGTT 6mer3-8 dme-miR-317-3p 4 + 687339 687385 3'utr CG11360 FlyBase G42717.1 GAATAGCGGATATAAAAATTTTTCTGTGTTTTAGGAAGTCATCTATA 10 687361 0.988469687 4 8 110 0.727272727 0.602059991 0.454545455 0.1 0.181818182 10 2 1 8 4:687339-687385 6 13 888 FBgn0039920 1210.836667 29.66666667 45.19333333 0.010736378 0.438202247 0.287653046 3 2 2.5 0.5 dme-miR-2b-2-5p 7mer-A1 TGAAGAA 4 687457 687463 + 4_687457_687463_+ 0.810023659 0.797051046 0.803537352 0.009173084 CG11360 FBtr0089091|FBtr0310540|FBtr0310539|FBtr0310541 686039|686039|686039|686039 689595|687565|690650|687565 4 + 687421 687474 3'utr CG11360 FlyBase G56565.1 AAGTAGAACAAACCCAAATTCTATTGAAGACCTTAGTGAAGAATTTTAATAGTG 11 687454 0.976640334 6 11 74 1 1.146128036 0.071428571 0.272727273 0.428571429 11 0 0 14 4:687421-687474 7 CG11360 FBtr0310541|FBtr0310539|FBtr0310540|FBtr0089091 686039|686039|686039|686039 687565|690650|687565|689595 TGAAGAA 7mer-A1 dme-miR-2b-2-5p 4 + 687424 687470 3'utr CG11360 FlyBase G42718.1 TAGAACAAACCCAAATTCTATTGAAGACCTTAGTGAAGAATTTTAAT 7 687465 0.969190367 6 7 42 1 0.954242509 0.111111111 0.285714286 0.444444444 7 0 0 9 4:687424-687470 7 7.5 889 FBgn0039920 1210.836667 29.66666667 45.19333333 0.006194064 0.252808989 0.16595368 3 -8 -2.5 0.5 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT 4 689631 689637 + 4_689631_689637_+ 0.479932826 0.531750113 0.505841469 0.036640364 CG11360 FBtr0310539 686039 690650 4 + 689612 689657 3'utr CG11360 FlyBase G56576.1 TTAAATAAAACGGTATCTATGGTGCTTATAACAAACTTGAACCATA 36 689631 0.773776222 2 36 292 1 1.633468456 0 0.194444444 0.325581395 36 0 0 43 4:689612-689657 7 CG11360 FBtr0310539 686039 690650 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" 4 + 689615 689651 3'utr CG11360 FlyBase G42727.1 AATAAAACGGTATCTATGGTGCTTATAACAAACTTGA 18 689631 0.723881904 5 17 132 0.964285714 1.431363764 0.071428571 0.388888889 0.607142857 18 1 0 27 4:689615-689651 7 26.5 890 FBgn0039920 1210.836667 29.66666667 45.19333333 0.021885693 0.893258427 0.586369671 0 0 0 0.5 dme-bantam-3p 7mer-m8 TGATCTC X 10077302 10077308 - X_10077302_10077308_- 0.656717984 0.643860956 0.65028947 0.009091272 ZAP3 FBtr0308584 10077004 10077349 X - 10077244 10077335 5'utr ZAP3 FlyBase G66210.1 GGCAGCAGCAGCGCAGGACCTGATCTTTGATCTCTGAACTCTGAACTCTGAACTCTGAACTCTGAACTCTGAACTCTGAACTCTGAACTCTG 90 10077301 0.988264536 8 82 753 0.902912621 1.366422957 0.233009709 0.133333333 0.242718447 90 7 3 93 X:10077244-10077335 7 ZAP3 FBtr0308584 10077004 10077349 TGATCTC 7mer-m8 dme-bantam-3p X - 10077278 10077335 5'utr ZAP3 FlyBase G49842.1 GGCAGCAGCAGCGCAGGACCTGATCTTTGATCTCTGAACTCTGAACTCTGAACTCTGA 70 10077301 0.986149418 6 66 555 0.944444444 1.309630167 0.175925926 0.4 0.611111111 70 2 4 102 X:10077278-10077335 7 79 891 FBgn0052685 2208 46.58 71.55666667 0.035778986 1.69600687 1.104020124 -7 -7 -7 0.5 dme-miR-14-3p 6mer3-8 AAGACT X 10264306 10264311 - X_10264306_10264311_- 0.643870344 0.908686109 0.776278226 0.187253048 CG12643 FBtr0071481 10264231 10264840 X - 10264283 10264332 3'utr CG12643 FlyBase G66241.1 TTTAATTTGTATTTAGAGCTAAAGACTACAGTTTATACATTTTATGAATT 22 10264313 0.844661757 7 20 173 0.884615385 1.361727836 0.230769231 0.181818182 0.307692308 22 3 0 23 X:10264283-10264332 6 CG12643 FBtr0071481 10264231 10264840 AAGACT 6mer3-8 dme-miR-14-3p X - 10264282 10264337 3'utr CG12643 FlyBase G49865.1 ACGTATTTAATTTGTATTTAGAGCTAAAGACTACAGTTTATACATTTTATGAATTT 14 10264322 0.82261246 7 13 146 0.9 1.255272505 0.15 0.428571429 0.6 14 2 0 18 X:10264282-10264337 6 17 892 FBgn0040942 927.6666667 110.47 167.3433333 0.018325548 0.153887933 0.101587555 2 11 6.5 0.5 dme-miR-980-3p 7mer-m8 GGCAGCT X 10713644 10713650 - X_10713644_10713650_- 0.649807132 0.644891401 0.647349267 0.003475925 CG32676 FBtr0071503|FBtr0333017 10713113|10711161 10714398|10714398 X - 10713538 10713680 3'utr CG32676 FlyBase G66374.1 ACACGATCACACACACACACACCTGGCTTTGGCAGCTTTATGTTATGTTTAACTTTAATAACCGACGGCGGGCTGAATGAAAATCTGCACCAGCGACTGCGATGTGGCGCTTTAACCTAATTTGCCTTAATAGAAAATCGTTT 137 10713651 0.984223356 17 126 1046 0.924528302 1.69019608 0.044025157 0.116788321 0.238993711 137 10 2 147 X:10713538-10713680 7 CG32676 FBtr0333017|FBtr0071503 10711161|10713113 10714398|10714398 GGCAGCT 7mer-m8 dme-miR-980-3p X - 10713625 10713678 3'utr CG32676 FlyBase G49965.1 ACGATCACACACACACACACCTGGCTTTGGCAGCTTTATGTTATGTTTAACTTT 75 10713651 0.691063469 8 73 588 0.971962617 2.017033339 0.018691589 0.36 0.551401869 75 3 0 104 X:10713625-10713678 7 89 893 FBgn0052676 977.3866667 21.50333333 32.91666667 0.091059151 4.138893195 2.703797468 1 1 1 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 10771321 10771326 + X_10771321_10771326_+ 0.825736992 0.6863312 0.756034096 0.098574787 BTBD9 FBtr0071497|FBtr0071497|FBtr0071497|FBtr0334456|FBtr0334456|FBtr0334456 10771071|10771071|10771071|10771071|10771071|10771071 10771699|10771699|10771699|10772154|10772154|10772154 X + 10771304 10771400 3'utr BTBD9 FlyBase G60306.1 TGTTTTTATAATTTTATTGTGATCCAAAAATAATTCCTTATGTTTGCAAGGCAGCAGAGTTATTTATATAAGCAATATAACTGAATTCTATGCACAC 31 10771319 0.98590632 14 31 258 1 1.591064607 0.025641026 0.193548387 0.358974359 31 0 0 39 X:10771304-10771400 6 BTBD9 FBtr0334456|FBtr0334456|FBtr0334456|FBtr0071497|FBtr0071497|FBtr0071497 10771071|10771071|10771071|10771071|10771071|10771071 10772154|10772154|10772154|10771699|10771699|10771699 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X + 10771309 10771349 3'utr BTBD9 FlyBase G45582.1 TTATAATTTTATTGTGATCCAAAAATAATTCCTTATGTTTG 21 10771320 0.971924366 5 19 169 0.846153846 0.643452676 0.038461538 0.238095238 0.384615385 21 0 4 22 X:10771309-10771349 6 20.5 894 FBgn0030228 130.9633333 5.32 8.203333333 0.156532363 3.853383459 2.498984153 2 1 1.5 0.5 dme-miR-14-3p 7mer-A1 AGACTGA X 10790375 10790381 - X_10790375_10790381_- 0.808656528 0.816191758 0.812424143 0.005328262 Imp FBtr0073414 10787867 10797068 X - 10790300 10790418 3'utr Imp FlyBase G66434.1 TTCGATTTGTAATAGATTATATACGGTAATCAACTGGAGACTGAGCTACAACATATATTTAGTTACCGTTATATTTATTGCAGAGACACACACACATACATACACTAACACCAACCCCA 745 10790385 0.972319165 25 680 3989 0.913142857 1.94830427 0.138285714 0.139597315 0.267428571 745 68 8 799 X:10790300-10790418 7 Imp FBtr0073414 10787867 10797068 AGACTGA 7mer-A1 dme-miR-14-3p X - 10790333 10790415 3'utr Imp FlyBase G50014.1 GATTTGTAATAGATTATATACGGTAATCAACTGGAGACTGAGCTACAACATATATTTAGTTACCGTTATATTTATTGCAGAGA 546 10790385 0.718578684 21 493 2844 0.923255814 1.945577993 0.197674419 0.41025641 0.625581395 546 58 8 794 X:10790333-10790415 7 555.5 895 FBgn0262735 4183.533333 61.35 94.29666667 0.132782496 9.054604727 5.890982361 4 4 4 0.5 dme-miR-263a-5p 6mer3-8 GTGCCA X 10792594 10792599 - X_10792594_10792599_- 0.899372222 0.907085219 0.90322872 0.005453915 Imp FBtr0073418|FBtr0073416|FBtr0073414 10792506|10790803|10787867 10797068|10797068|10797068 X - 10792551 10792631 3'utr Imp FlyBase G66439.1 AATGAGAAAAGTACTTTTTTGTGTTGTAAGTTGTGCCAAGTACTGATAACGTTTAAGGTGTGATAAACTCGTTTTTAAATT 36 10792600 0.850214232 12 35 287 0.97826087 1.653212514 0.130434783 0.277777778 0.434782609 36 1 0 45 X:10792551-10792631 6 Imp FBtr0073416|FBtr0073414|FBtr0073418 10790803|10787867|10792506 10797068|10797068|10797068 GTGCCA 6mer3-8 dme-miR-263a-5p X - 10792539 10792623 3'utr Imp FlyBase G50020.1 AAGTACTTTTTTGTGTTGTAAGTTGTGCCAAGTACTGATAACGTTTAAGGTGTGATAAACTCGTTTTTAAATTTAACAACTATTT 34 10792591 0.983330066 10 32 259 0.94 1.672097858 0.34 0.352941176 0.56 34 3 0 47 X:10792539-10792623 6 25 896 FBgn0262735 4183.533333 61.35 94.29666667 0.00597581 0.407497963 0.265120718 1 -8 -3.5 0.5 dme-miR-282-5p 8mer-A1 AGAGGCTA X 10793075 10793082 - X_10793075_10793082_- 0.631461579 0.632167478 0.631814528 0.000499147 Imp FBtr0073418|FBtr0073416|FBtr0073414 10792506|10790803|10787867 10797068|10797068|10797068 X - 10793016 10793165 3'utr Imp FlyBase G66440.1 AGAGAACTCAGTTTGAAGAACGAAGAAAGAAAAGCGATTGTGAGTTGTGTGAAAAGCAGAAACGAAATTATTTTTTAGTATTTAGAGGCTATTTTATATCGTTATTAAAGCAGGTAGGCAAGTGAGGCAACGGTTAGGAAAAAAAGGAAG 235 10793083 0.984308871 24 222 1734 0.949090909 2.416640507 0.141818182 0.157446809 0.28 235 14 0 261 X:10793016-10793165 8 Imp FBtr0073416|FBtr0073414|FBtr0073418 10790803|10787867|10792506 10797068|10797068|10797068 AGAGGCTA 8mer-A1 dme-miR-282-5p X - 10793013 10793184 3'utr Imp FlyBase G50021.1 TAATGATAATGATGTAGAAAGAGAACTCAGTTTGAAGAACGAAGAAAGAAAAGCGATTGTGAGTTGTGTGAAAAGCAGAAACGAAATTATTTTTTAGTATTTAGAGGCTATTTTATATCGTTATTAAAGCAGGTAGGCAAGTGAGGCAACGGTTAGGAAAAAAAGGAAGTGA 196 10793083 0.987128278 29 181 1389 0.928082192 1.955848036 0.157534247 0.336734694 0.554794521 196 19 2 271 X:10793013-10793184 8 82.5 897 FBgn0262735 4183.533333 61.35 94.29666667 0.019720173 1.344743276 0.87489837 1 1 1 0.5 dme-miR-79-3p 8mer-A1 TAGCTTTA X 10862879 10862886 + X_10862879_10862886_+ 0.498840226 0.528048223 0.513444224 0.020653175 CG2186 FBtr0073381|FBtr0332961 10862782|10862782 10863580|10866246 X + 10862817 10862980 3'utr CG2186 FlyBase G60340.1 TATAACTATTATCGATTATAGATGTACGACGATGATGGGGAGTAGTGCAGTAAGCAGTACTTTAGCTTTAAGGTAAAAAGTTATAAATAGTTGAGCTTTCTTTATAAATAGCGGATTATACATATATCTAGATGTCATGTAATTGGTGGGTGTGCGTGAGGGTC 22 10862878 0.98390638 12 21 179 0.966666667 1.161368002 0.1 0.272727273 0.466666667 22 0 1 29 X:10862817-10862980 8 CG2186 FBtr0073381|FBtr0332961 10862782|10862782 10863580|10866246 TAGCTTTA 8mer-A1 dme-miR-79-3p X + 10862810 10862944 3'utr CG2186 FlyBase G45607.1 AGTTTTCTATAACTATTATCGATTATAGATGTACGACGATGATGGGGAGTAGTGCAGTAAGCAGTACTTTAGCTTTAAGGTAAAAAGTTATAAATAGTTGAGCTTTCTTTATAAATAGCGGATTATACATATATC 27 10862878 0.993591984 11 26 200 1 1.643452676 0.386363636 0.481481481 0.681818182 27 0 0 44 X:10862810-10862944 8 10 898 FBgn0030243 1064.863333 20.89333333 32.09 0.009390876 0.47862157 0.311623559 1 1 1 0.5 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 11094392 11094399 + X_11094392_11094399_+ 0.601111811 0.600689977 0.600900894 0.000298258 CG2061 FBtr0073429|FBtr0332383|FBtr0073431 11094303|11094303|11094303 11094660|11094947|11094660 X + 11094366 11094448 3'utr CG2061 FlyBase G60372.1 TCGAATCAGGGAGAGTTATCATCATTTCTAGTCACTTGTTTGCCGATTTTTCTCTCATTGTTGCCTTTGCGTTCACCCAGCGA 209 11094391 0.794624299 12 200 2075 0.958174905 1.799340549 0.406844106 0.220095694 0.380228137 209 8 3 252 X:11094366-11094448 8 CG2061 FBtr0073431|FBtr0073429|FBtr0332383 11094303|11094303|11094303 11094660|11094660|11094947 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X + 11094366 11094414 3'utr CG2061 FlyBase G45629.1 TCGAATCAGGGAGAGTTATCATCATTTCTAGTCACTTGTTTGCCGATTT 126 11094391 0.961042815 6 123 1220 0.97740113 2.238046103 0.463276836 0.349206349 0.536723164 126 4 0 173 X:11094366-11094414 8 164 899 FBgn0027498 98.96 5.68 8.753333333 1.657235247 28.87323944 18.73571973 1 1 1 0.5 dme-miR-2a-2-5p 8mer-A1 TGATGAGA X 11111872 11111879 + X_11111872_11111879_+ 0.397203465 0.511729852 0.454466658 0.080982394 Hsp60 FBtr0073434|FBtr0073435 11111824|11111824 11112308|11112308 X + 11111831 11111914 3'utr Hsp60 FlyBase G60388.1 TGCCACTGACTGGTCGACAGCCGGAGAGGGGGAGGGAGATGTGATGAGAACCGAAACCAGCATACTGTTTAAGTCACGATGTGG 64 11111875 0.887892394 7 60 171 0.941176471 1.329058719 0.25 0.0625 0.117647059 64 2 2 64 X:11111831-11111914 8 Hsp60 FBtr0073435|FBtr0073434 11111824|11111824 11112308|11112308 TGATGAGA 8mer-A1 dme-miR-2a-2-5p X + 11111831 11111915 3'utr Hsp60 FlyBase G45641.1 TGCCACTGACTGGTCGACAGCCGGAGAGGGGGAGGGAGATGTGATGAGAACCGAAACCAGCATACTGTTTAAGTCACGATGTGGA 50 11111874 0.889051715 7 49 142 0.985915493 1.84509804 0.281690141 0.26 0.478873239 50 1 0 70 X:11111831-11111915 8 45 900 FBgn0015245 2987.88 154.9833333 236.8566667 0.015060846 0.290353801 0.189988319 -3 -2 -2.5 0.5 dme-miR-8-3p 7mer-A1 AGTATTA X 11334360 11334366 - X_11334360_11334366_- 0.724065785 0.719515886 0.721790835 0.003217265 Kap3 FBtr0343145|FBtr0289956|FBtr0289954|FBtr0289955|FBtr0343146 11334185|11334185|11334185|11334185|11334185 11334788|11334788|11334788|11334788|11334788 X - 11334337 11334428 3'utr Kap3 FlyBase G66610.1 ATGGCTTAGCTTCCACTTTGGTTGTTCGCAACGCAATTACTGTGCAATAATCTCTCACTTAAAGTATTACGTCGAACGTTTTTAGTTGTACT 11 11334370 0.990975075 9 10 91 0.909090909 1 0.272727273 0 0 11 1 0 10 X:11334337-11334428 7 Kap3 FBtr0289956|FBtr0289954|FBtr0289955|FBtr0343146|FBtr0343145 11334185|11334185|11334185|11334185|11334185 11334788|11334788|11334788|11334788|11334788 AGTATTA 7mer-A1 dme-miR-8-3p X - 11334350 11334428 3'utr Kap3 FlyBase G50154.1 ATGGCTTAGCTTCCACTTTGGTTGTTCGCAACGCAATTACTGTGCAATAATCTCTCACTTAAAGTATTACGTCGAACGT 10 11334369 0.980381356 6 9 83 0.909090909 1 0.090909091 0.1 0.181818182 10 1 0 10 X:11334350-11334428 7 7 901 FBgn0028421 198.6666667 6.38 9.766666667 0.035234899 1.097178683 0.716723549 4 3 3.5 0.5 dme-miR-33-5p 7mer-A1 AATGCAA X 11344532 11344538 + X_11344532_11344538_+ 0.480811873 0.484940104 0.482875989 0.002919078 CG34348 FBtr0112557 11344094 11344734 X + 11344470 11344542 3'utr CG34348 FlyBase G60469.1 AGGCACATTAAGCAATTATGTCGCTAGTTTTCCATTAGGTATATCATTTTTGTACCTTTTTTAATGCAACAGT 5 11344529 0.988405962 5 5 58 1 0.698970004 0.2 0 0 5 0 0 5 X:11344470-11344542 7 CG34348 FBtr0112557 11344094 11344734 AATGCAA 7mer-A1 dme-miR-33-5p X + 11344510 11344542 3'utr CG34348 FlyBase G45705.1 ATATCATTTTTGTACCTTTTTTAATGCAACAGT 4 11344529 0.985609229 4 4 34 1 0.698970004 0.2 0.25 0.4 4 0 0 5 X:11344510-11344542 7 3 902 FBgn0085377 250.7633333 13.94666667 21.41 0.011963472 0.215105163 0.140121439 3 3 3 0.5 dme-miR-14-3p 6mer3-8 AAGACT X 11360437 11360442 + X_11360437_11360442_+ 0.586988889 0.877403383 0.732196136 0.205354062 Pa1 FBtr0073456 11359762 11360929 X + 11360397 11360634 3'utr Pa1 FlyBase G60505.1 TGACAATATTCTTGATAGTATTGTCCGAAACCGACGTTTGAAGACTAGAATATAGAATATAGGATAGAACGGATGTAAATTTAAATCCAATGCGAGTAAAGCAGATAACAAGATAGGCAACTGTAGATCAGTCAACTTCTGTACATAAAAGAACTGAATTTCACTAATAGCTGTTAAAACTAGAATATAGAATGTAGGATAGAACGGATGTACATTTAAATCCAAGATGAGTAAGATA 110 11360442 0.975511654 24 105 612 0.96031746 2.08278537 0.142857143 0.127272727 0.238095238 110 5 0 121 X:11360397-11360634 6 Pa1 FBtr0073456 11359762 11360929 AAGACT 6mer3-8 dme-miR-14-3p X + 11360409 11360467 3'utr Pa1 FlyBase G45732.1 TGATAGTATTGTCCGAAACCGACGTTTGAAGACTAGAATATAGAATATAGGATAGAACG 45 11360433 0.747640826 5 42 253 0.971014493 1.826074803 0.086956522 0.4 0.608695652 45 2 0 67 X:11360409-11360467 6 50.5 903 FBgn0030294 242.3333333 18.24 28.02 0.208390646 2.768640351 1.802284083 -5 4 -0.5 0.5 dme-miR-317-3p 6mer3-8 TGTGTT X 11361418 11361423 - X_11361418_11361423_- 0.788851033 0.934072569 0.861461801 0.102687178 hop FBtr0073457 11360928 11361814 X - 11361402 11361456 3'utr hop FlyBase G66628.1 ATGTATATGTATAAACAAATTCTCAACCTACTTTGTGTTATACATTTTAGACAAC 30 11361425 0.728777607 6 29 268 0.970588235 1.51851394 0 0.133333333 0.235294118 30 1 0 33 X:11361402-11361456 6 hop FBtr0073457 11360928 11361814 TGTGTT 6mer3-8 dme-miR-317-3p X - 11361365 11361450 3'utr hop FlyBase G50168.1 ATGTATAAACAAATTCTCAACCTACTTTGTGTTATACATTTTAGACAACTTTGTTAAATATTGTTAAGCTTGAGCTTCAATTTTTT 22 11361425 0.983430569 5 22 173 1 1.556302501 0.055555556 0.454545455 0.666666667 22 0 0 36 X:11361365-11361450 6 15 904 FBgn0004864 288.6033333 6.79 10.3 0.051974452 2.209131075 1.45631068 2 2 2 0.5 dme-miR-317-3p 7mer-A1 GTGTTCA X 11406703 11406709 + X_11406703_11406709_+ 0.672275794 0.663555342 0.667915568 0.006166325 dlg1 FBtr0330390|FBtr0301289|FBtr0073485|FBtr0112813|FBtr0073486|FBtr0073488|FBtr0308088|FBtr0073489|FBtr0073487|FBtr0308089|FBtr0333261|FBtr0112812|FBtr0073490|FBtr0333262 11406300|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177 11407751|11407751|11407751|11409776|11407751|11407751|11407985|11407751|11407751|11408338|11408338|11409776|11407751|11409776 X + 11406681 11406762 3'utr dlg1 FlyBase G60525.1 TGGCATATGAGATGAGATATGGGTGTTCAAACGGTAGCGGACAAAGGTGTATAGTTTTTAGTTAGAACAAAGTTGGATATAA 8 11406700 0.981467526 6 8 57 1 0.954242509 0.111111111 0.125 0.222222222 8 0 0 9 X:11406681-11406762 7 dlg1 FBtr0073487|FBtr0333261|FBtr0112812|FBtr0073490|FBtr0308089|FBtr0333262|FBtr0073489|FBtr0073485|FBtr0301289|FBtr0073486|FBtr0112813|FBtr0073488|FBtr0330390|FBtr0308088 11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406177|11406300|11406177 11407751|11408338|11409776|11407751|11408338|11409776|11407751|11407751|11407751|11407751|11409776|11407751|11407751|11407985 GTGTTCA 7mer-A1 dme-miR-317-3p X + 11406675 11406762 3'utr dlg1 FlyBase G45739.1 GGCATATGGCATATGAGATGAGATATGGGTGTTCAAACGGTAGCGGACAAAGGTGTATAGTTTTTAGTTAGAACAAAGTTGGATATAA 13 11406701 0.98017639 8 11 84 0.823529412 1.146128036 0.117647059 0.230769231 0.411764706 13 3 0 14 X:11406675-11406762 7 3.5 905 FBgn0001624 7812.856667 177.1533333 273.5833333 0.00044798 0.019756896 0.012793177 3 2 2.5 0.5 dme-miR-980-3p 7mer-m8 GGCAGCT X 11432091 11432097 - X_11432091_11432097_- 0.583589923 0.617571917 0.60058092 0.024028903 Evi5 FBtr0300733|FBtr0332620|FBtr0073547 11431331|11431331|11430521 11433279|11434760|11433279 X - 11432053 11432118 3'utr Evi5 FlyBase G66657.1 TGGTTCATTTAACCCATATTTGGCAGCTTGTCGCGTAAAACGATTTCGATTTTGACATCGACTTTC 310 11432098 0.7391194 10 302 2354 0.974093264 2.274157849 0.007772021 0.193548387 0.352331606 310 9 1 376 X:11432053-11432118 7 Evi5 FBtr0300733|FBtr0332620|FBtr0073547 11431331|11431331|11430521 11433279|11434760|11433279 GGCAGCT 7mer-m8 dme-miR-980-3p X - 11432058 11432127 3'utr Evi5 FlyBase G50187.1 TGATTTATATGGTTCATTTAACCCATATTTGGCAGCTTGTCGCGTAAAACGATTTCGATTTTGACATCGA 151 11432098 0.978917616 10 149 1096 0.99122807 2.354108439 0.00877193 0.370860927 0.583333333 151 2 0 226 X:11432058-11432127 7 226.5 906 FBgn0262740 507.6533333 10.50666667 16.15 0.446170615 21.55774112 14.0247678 1 1 1 0.5 dme-miR-1003-3p 7mer-A1 TGTGAGA X 11432830 11432836 - X_11432830_11432836_- 0.462870806 0.449301934 0.45608637 0.009594661 Evi5 FBtr0300733|FBtr0332620|FBtr0073547 11431331|11431331|11430521 11433279|11434760|11433279 X - 11432695 11432896 3'utr Evi5 FlyBase G66660.1 ATGTTTTGCAATCGAAACACACTCATATTTATTTATTTTAAATCCTAATTGAAACGATATTGTGAGAGTATTTTACACCCCTGTACATTAATCAATACGGCAACTAATCCGATTCGATGCGATGCGATGGATTGGAGTTAGGAGATTGGCATTTTGATATACCCTAGATGTATGGCACATATGCAATGCAATGAATTTTATG 80 11432837 0.900703208 25 75 580 0.943820225 1.225309282 0.101123596 0.1 0.191011236 80 1 4 84 X:11432695-11432896 7 Evi5 FBtr0300733|FBtr0332620|FBtr0073547 11431331|11431331|11430521 11433279|11434760|11433279 TGTGAGA 7mer-A1 dme-miR-1003-3p X - 11432781 11432850 3'utr Evi5 FlyBase G50188.2 AATTGAAACGATATTGTGAGAGTATTTTACACCCCTGTACATTAATCAATACGGCAACTAATCCGATTCG 31 11432837 0.767691074 5 28 190 0.954545455 1.62324929 0.295454545 0.35483871 0.545454545 31 2 0 42 X:11432781-11432850 7 31 907 FBgn0262740 507.6533333 10.50666667 16.15 0.061065294 2.950507614 1.919504644 1 1 1 0.5 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG X 11605490 11605495 + X_11605490_11605495_+ 0.965197636 0.569050195 0.767123915 0.280118513 rho-4 FBtr0073518|FBtr0073519 11605445|11605445 11606288|11606000 X + 11605469 11605506 3'utr rho-4 FlyBase G60633.1 AGCCCTAACCCTTAACCATGTCCAAAGTGCACTTCGAT 11 11605487 0.673163228 4 9 59 0.916666667 0.740362689 0.166666667 0.090909091 0.166666667 11 0 1 11 X:11605469-11605506 6 rho-4 FBtr0073519|FBtr0073518 11605445|11605445 11606000|11606288 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" X + 11605438 11605524 stop_codon rho-4 FlyBase G45810.1 TACAACTAGCCCCATCACTAGCTCTAGCCCTAGCCCTAACCCTTAACCATGTCCAAAGTGCACTTCGATATTGAGCCGAGGTTGCAG 15 11605487 0.960185433 9 14 66 0.96 1.380211242 0.2 0.6 0.76 15 1 0 24 X:11605438-11605524 6 9 908 FBgn0030318 1970.58 111.7533333 171.94 0.004567183 0.080534511 0.052343841 3 3 3 0.5 dme-miR-308-3p 7mer-m1 TGTGATT X 11763492 11763498 - X_11763492_11763498_- 0.436470643 0.437746387 0.437108515 0.000902127 CG9360 FBtr0073613 11763472 11763643 X - 11763483 11763513 3'utr CG9360 FlyBase G66763.1 ATGTACCAAACGTTATGTGATTAAAATTCTT 25 11763501 0.694579367 4 22 174 0.884615385 1.361727836 0.115384615 0.04 0.076923077 25 3 0 23 X:11763483-11763513 7 CG9360 FBtr0073613 11763472 11763643 TGTGATT 7mer-m1 dme-miR-308-3p X - 11763483 11763516 3'utr CG9360 FlyBase G50276.1 TGCATGTACCAAACGTTATGTGATTAAAATTCTT 15 11763501 0.700413501 3 15 110 1 1.361727836 0.086956522 0.466666667 0.652173913 15 0 0 23 X:11763483-11763516 7 19.5 909 FBgn0030332 279 33.07666667 49.99 0.069892473 0.589539454 0.390078016 3 3 3 0.5 dme-miR-2a-2-5p 8mer-A1 TGATGAGA X 11801933 11801940 - X_11801933_11801940_- 0.557012952 0.467657389 0.512335171 0.063183951 Hsc70-3 FBtr0073609|FBtr0345166|FBtr0073608|FBtr0073610|FBtr0073611 11801694|11801694|11801694|11801694|11801694 11802612|11802612|11802612|11802612|11802612 X - 11801874 11801969 3'utr Hsc70-3 FlyBase G66766.1 ATATATCGGGGAATCGGACTGTATTGTATTGATGAGATATAGAAGAAAGAGAGAGAGAGAGGAGCCAGGGAGCTGCGGGTCGTGCGGAGGAGGAGA 45 11801930 0.961533878 10 43 216 0.962962963 1.238882089 0.240740741 0.133333333 0.277777778 45 0 2 52 X:11801874-11801969 8 Hsc70-3 FBtr0073610|FBtr0073608|FBtr0345166|FBtr0073609|FBtr0073611 11801694|11801694|11801694|11801694|11801694 11802612|11802612|11802612|11802612|11802612 TGATGAGA 8mer-A1 dme-miR-2a-2-5p X - 11801768 11801970 3'utr Hsc70-3 FlyBase G50278.1 AATATATCGGGGAATCGGACTGTATTGTATTGATGAGATATAGAAGAAAGAGAGAGAGAGAGGAGCCAGGGAGCTGCGGGTCGTGCGGAGGAGGAGAATAGGTCGATGAGGAATGGGAACGGCAGAAGAGCAAGAGATAAACCACGAAATCATACGGAAACCACTAGAGAGCAGCGGCACACAACATCGGCCAGGCTTCATAA 46 11801939 0.999950049 18 36 174 0.823529412 1.748188027 0.191176471 0.347826087 0.558823529 46 12 0 56 X:11801768-11801970 8 26 910 FBgn0001218 13055.07 506.7333333 774.0533333 0.001991563 0.051309038 0.033589417 -10 -1 -5.5 0.5 dme-miR-14-3p 7mer-A1 AGACTGA X 11802532 11802538 - X_11802532_11802538_- 0.46798916 0.468374229 0.468181694 0.000272236 Hsc70-3 FBtr0073609|FBtr0345166|FBtr0073608|FBtr0073610|FBtr0073611 11801694|11801694|11801694|11801694|11801694 11802612|11802612|11802612|11802612|11802612 X - 11802480 11802597 3'utr Hsc70-3 FlyBase G66770.1 CTCACATAACTTACACACAGCCCAGCCTGCATCCATTCGAGATCATAGTGTTGGAATTCAGACTGAAAAAAAAAACAATTATAACTTAATTGCAAACGCAGTAGCCACAACAACAACA 1692 11802541 0.962294804 18 1612 8797 0.951461119 1.792165671 0.326399208 0.153664303 0.290737989 1692 68 30 1921 X:11802480-11802597 7 Hsc70-3 FBtr0073610|FBtr0073608|FBtr0345166|FBtr0073609|FBtr0073611 11801694|11801694|11801694|11801694|11801694 11802612|11802612|11802612|11802612|11802612 AGACTGA 7mer-A1 dme-miR-14-3p X - 11802483 11802602 3'utr Hsc70-3 FlyBase G50282.1 CCCCCCTCACATAACTTACACACAGCCCAGCCTGCATCCATTCGAGATCATAGTGTTGGAATTCAGACTGAAAAAAAAAACAATTATAACTTAATTGCAAACGCAGTAGCCACAACAACA 1303 11802541 0.815950152 19 1256 6595 0.961621622 1.818812184 0.318918919 0.324635457 0.524324324 1303 45 26 1779 X:11802483-11802602 7 1440 911 FBgn0001218 13055.07 506.7333333 774.0533333 0.110301975 2.841731351 1.860336928 3 3 3 0.5 dme-miR-308-3p 7mer-m1 TGTGATT X 11833432 11833438 + X_11833432_11833438_+ 0.316593569 0.392608044 0.354600806 0.053750298 rudhira FBtr0305606 11832923 11834386 X + 11833402 11833456 3'utr rudhira FlyBase G60795.1 AAAACAAAACACAAAACTCTGCAAAAAAATTGTGATTTATCGAAAAGAAAAACAA 157 11833431 0.97909335 6 154 1074 0.985294118 1.826074803 0.200980392 0.248407643 0.421568627 157 1 2 201 X:11833402-11833456 7 rudhira FBtr0305606 11832923 11834386 TGTGATT 7mer-m1 dme-miR-308-3p X + 11833406 11833453 3'utr rudhira FlyBase G45916.1 CAAAACACAAAACTCTGCAAAAAAATTGTGATTTATCGAAAAGAAAAA 102 11833432 0.779517959 4 97 694 0.958333333 1.537819095 0.222222222 0.323529412 0.520833333 102 3 3 138 X:11833406-11833453 7 128.5 912 FBgn0266019 2080.863333 30.08666667 46.56 0.061753215 4.270994904 2.759879725 1 0 0.5 0.5 dme-miR-305-3p 7mer-m1 TGTGCCG X 11877805 11877811 - X_11877805_11877811_- 0.71512997 0.525168278 0.620149124 0.134323206 CG10353 FBtr0331591|FBtr0331594|FBtr0344702|FBtr0114451|FBtr0308070|FBtr0114452|FBtr0344703 11877735|11877735|11877735|11877735|11877735|11877735|11877735 11878742|11878742|11878742|11878742|11878742|11878742|11878742 X - 11877793 11877827 3'utr CG10353 FlyBase G66853.1 AAAACAAATTGTGTTGTGTGCCGGATAAAAAAAAA 10 11877810 0.717539577 5 10 62 1 1.041392685 0.181818182 0.1 0.181818182 10 0 0 11 X:11877793-11877827 7 CG10353 FBtr0344702|FBtr0331594|FBtr0331591|FBtr0344703|FBtr0114452|FBtr0308070|FBtr0114451 11877735|11877735|11877735|11877735|11877735|11877735|11877735 11878742|11878742|11878742|11878742|11878742|11878742|11878742 TGTGCCG 7mer-m1 dme-miR-305-3p X - 11877795 11877826 3'utr CG10353 FlyBase G50343.1 AAACAAATTGTGTTGTGTGCCGGATAAAAAAA 5 11877812 0.662485519 3 5 35 1 0.903089987 0 0.6 0.75 5 0 0 8 X:11877795-11877826 7 7.5 913 FBgn0030349 1118.516667 30.53 46.76333333 0.006705309 0.245660007 0.160382066 -1 1 0 0.5 dme-miR-11-3p 8mer-m1 CTGTGATG X 11889011 11889018 + X_11889011_11889018_+ 0.288625843 0.364186253 0.326406048 0.053429342 CG1840 FBtr0073571|FBtr0331590 11888967|11888967 11889186|11889186 X + 11888997 11889035 3'utr CG1840 FlyBase G60837.2 AATCCAACTCACCTCTGTGATGCGGCAATTAAAATAGAT 20 11889010 0.797048552 4 15 96 0.814814815 1.041392685 0.259259259 0.2 0.407407407 20 4 1 22 X:11888997-11889035 8 CG1840 FBtr0073571|FBtr0331590 11888967|11888967 11889186|11889186 CTGTGATG 8mer-m1 dme-miR-11-3p X + 11888997 11889026 3'utr CG1840 FlyBase G45942.1 AATCCAACTCACCTCTGTGATGCGGCAATT 19 11889010 0.67823952 4 14 101 0.740740741 1.301029996 0.185185185 0.315789474 0.518518519 19 7 0 20 X:11888997-11889026 8 19 914 FBgn0030351 18.33333333 3.326666667 5.123333333 1.036363636 5.711422846 3.708523097 1 1 1 0.5 dme-miR-184-3p 8mer-A1 TCCGTCCA X 11907593 11907600 - X_11907593_11907600_- 0.625127371 0.609865664 0.617496517 0.010791652 pot FBtr0073595|FBtr0305609 11907407|11907407 11908579|11908579 X - 11907574 11907650 3'utr pot FlyBase G66883.1 TACGATATACTTTCTCATGATAATCAATTTTCGCGTAACATTAGTACTAATCCGTCCAAGACATATACTATAAGTTT 79 11907602 0.78841305 10 71 591 0.905263158 1.33243846 0.210526316 0.151898734 0.294736842 79 6 3 86 X:11907574-11907650 8 pot FBtr0305609|FBtr0073595 11907407|11907407 11908579|11908579 TCCGTCCA 8mer-A1 dme-miR-184-3p X - 11907574 11907649 3'utr pot FlyBase G50359.1 ACGATATACTTTCTCATGATAATCAATTTTCGCGTAACATTAGTACTAATCCGTCCAAGACATATACTATAAGTTT 62 11907604 0.75493953 7 57 431 0.91011236 1.607455023 0.269662921 0.322580645 0.528089888 62 7 1 81 X:11907574-11907649 8 46 915 FBgn0250871 1 0.03 0.05 46 1533.333333 920 2 4 3 0.5 dme-miR-263a-5p 7mer-m8 GTGCCAT X 12585296 12585302 - X_12585296_12585302_- 0.435373316 0.413727661 0.424550489 0.015305751 LIMK1 FBtr0073660|FBtr0073661|FBtr0301831|FBtr0073659 12584383|12584383|12584943|12584943 12585938|12585938|12585938|12585938 X - 12585283 12585328 3'utr LIMK1 FlyBase G66959.1 CGGATAAAGAGAGAAGGAAGAAACTTGTGCCATGATGTTGATGCGA 27 12585303 0.953136275 2 27 123 1 1.462397998 0.517241379 0.037037037 0.103448276 27 0 0 29 X:12585283-12585328 7 LIMK1 FBtr0073659|FBtr0301831|FBtr0073661|FBtr0073660 12584943|12584943|12584383|12584383 12585938|12585938|12585938|12585938 GTGCCAT 7mer-m8 dme-miR-263a-5p X - 12585280 12585321 3'utr LIMK1 FlyBase G50416.1 AGAGAGAAGGAAGAAACTTGTGCCATGATGTTGATGCGAAAA 13 12585303 0.946782185 2 13 57 1 1.278753601 0.210526316 0.307692308 0.526315789 13 0 0 19 X:12585280-12585321 7 20 916 FBgn0041203 1320 31.21333333 47.99333333 0.015151515 0.640751815 0.416724545 1 1 1 0.5 dme-miR-317-3p 6mer3-8 TGTGTT X 12609712 12609717 + X_12609712_12609717_+ 0.982157932 0.88938863 0.935773281 0.065597801 Sec16 FBtr0340106|FBtr0310304|FBtr0113445|FBtr0340104 12608756|12608756|12608756|12608756 12609910|12609910|12609910|12609910 X + 12609661 12609767 3'utr Sec16 FlyBase G60909.1 AGAAGCAAATGAATTGTTCTCCCTGGTTTCTCTTATCAATGTATTCTCCTCTGTGTTTCTTTTTTACAATTGGTGTGAAATATGCAAATGATTCCAATTATATATAT 21 12609687 0.901102045 13 21 204 1 1.380211242 0.041666667 0.095238095 0.208333333 21 0 0 24 X:12609661-12609767 6 Sec16 FBtr0340104|FBtr0113445|FBtr0310304|FBtr0340106 12608756|12608756|12608756|12608756 12609910|12609910|12609910|12609910 TGTGTT 6mer3-8 dme-miR-317-3p X + 12609660 12609721 3'utr Sec16 FlyBase G45985.1 AAGAAGCAAATGAATTGTTCTCCCTGGTTTCTCTTATCAATGTATTCTCCTCTGTGTTTCTT 9 12609704 0.964568856 6 6 99 0.769230769 0.698970004 0.153846154 0.444444444 0.615384615 9 2 1 10 X:12609660-12609721 6 5.5 917 FBgn0052654 1220.54 20.34 31.29 0.004506202 0.270403147 0.175775008 25 8 16.5 0.5 dme-miR-277-3p 8mer-A1 TGCATTTA X 12679888 12679895 + X_12679888_12679895_+ 0.523163845 0.588241797 0.555702821 0.046017095 Tis11 FBtr0333756 12679239 12682554 X + 12679836 12679962 3'utr Tis11 FlyBase G60961.1 TCAAATCAAATCAACAAACCCCACGGCCAACGACGAATGTGAAAATCGTTCCTGCATTTATAGAAACTACTGCAGTGCATCCATTAGTAAAACCCATGCACACGCACACCTGTCGCTTTTGTTCAAT 32 12679896 0.978553899 11 30 194 0.944444444 1.531478917 0.138888889 0.125 0.222222222 32 2 0 34 X:12679836-12679962 8 Tis11 FBtr0333756 12679239 12682554 TGCATTTA 8mer-A1 dme-miR-277-3p X + 12679865 12679917 3'utr Tis11 FlyBase G46022.1 ACGACGAATGTGAAAATCGTTCCTGCATTTATAGAAACTACTGCAGTGCATCC 14 12679888 0.837078106 7 12 98 0.857142857 1.255272505 0.238095238 0.357142857 0.571428571 14 3 0 18 X:12679865-12679917 8 16.5 918 FBgn0011837 4912.7 119.65 184.0333333 0.003358642 0.137902215 0.089657671 -8 0 -4 0.5 dme-miR-92b-3p 8mer-A1 GTGCAATA X 13263983 13263990 - X_13263983_13263990_- 0.623347861 0.598825011 0.611086436 0.017340309 HDAC4 FBtr0308576|FBtr0333331|FBtr0301299|FBtr0073798|FBtr0301298|FBtr0333333|FBtr0333332|FBtr0333334 13263753|13262685|13263753|13263753|13262887|13262887|13262887|13262887 13264981|13264981|13264981|13264981|13264981|13264981|13264981|13264981 X - 13263968 13264002 3'utr HDAC4 FlyBase G67160.1 AAAATATATATTGTGCAATAAATGTGAGAAAATGA 6 13263991 0.724042958 4 6 35 1 0.77815125 0.333333333 0 0 6 0 0 6 X:13263968-13264002 8 HDAC4 FBtr0333334|FBtr0333332|FBtr0333333|FBtr0301298|FBtr0073798|FBtr0301299|FBtr0333331|FBtr0308576 13262887|13262887|13262887|13262887|13263753|13263753|13262685|13263753 13264981|13264981|13264981|13264981|13264981|13264981|13264981|13264981 GTGCAATA 8mer-A1 dme-miR-92b-3p X - 13263970 13264004 3'utr HDAC4 FlyBase G50550.1 AAAAAATATATATTGTGCAATAAATGTGAGAAAAT 5 13263992 0.901998704 3 5 37 1 0.903089987 0 0.4 0.625 5 0 0 8 X:13263970-13264004 8 5.5 919 FBgn0041210 5130.7 102.1166667 156.9133333 0.001071978 0.053859964 0.035051196 1 2 1.5 0.5 dme-miR-14-3p 8mer-A1 AAGACTGA X 13328933 13328940 + X_13328933_13328940_+ 0.55249329 0.474363314 0.513428302 0.055246253 IP3K2 FBtr0344168|FBtr0344171|FBtr0344170|FBtr0346133|FBtr0346134|FBtr0344169 13328764|13328764|13328764|13328764|13328764|13328764 13329069|13329303|13329303|13329303|13329303|13329303 X + 13328908 13328965 3'utr IP3K2 FlyBase G61091.1 ATTTAACCCCTTAAGTTTAAAATCAAAGACTGAAATCACAATATGCATACACATATTT 171 13328924 0.595304778 7 140 831 0.823232323 1.066059569 0.01010101 0.111111111 0.232323232 171 22 13 163 X:13328908-13328965 8 IP3K2 FBtr0344169|FBtr0346134|FBtr0346133|FBtr0344170|FBtr0344171|FBtr0344168 13328764|13328764|13328764|13328764|13328764|13328764 13329303|13329303|13329303|13329303|13329303|13329069 AAGACTGA 8mer-A1 dme-miR-14-3p X + 13328911 13328956 3'utr IP3K2 FlyBase G46128.1 TAACCCCTTAAGTTTAAAATCAAAGACTGAAATCACAATATGCATA 133 13328924 0.627803698 6 120 671 0.889473684 1.5289167 0 0.323308271 0.526315789 133 17 4 169 X:13328911-13328956 8 151.5 920 FBgn0266375 946.9066667 46.57333333 71.42666667 0.159994649 3.25293444 2.121056562 9 9 9 0.5 dme-miR-184-3p 6mer2-7 CCGTCC X 13379599 13379604 + X_13379599_13379604_+ 0.962313083 0.957019239 0.959666161 0.003743353 CG1640 FBtr0073774|FBtr0073772|FBtr0073771|FBtr0073770|FBtr0073769|FBtr0339837|FBtr0073773 13379580|13379580|13379580|13379580|13379580|13379580|13379580 13380160|13380160|13380160|13380160|13380160|13380160|13380160 X + 13379576 13379650 stop_codon CG1640 FlyBase G61111.1 AAGTAGATCAGCTGCCAACTTCCCCGTCCTCGATCCCTGTGTTAAGTGTCAATCCTCCGGCTTAGGATTAAAAAT 45 13379608 0.759661754 15 40 308 0.907407407 1.389166084 0.12962963 0.2 0.333333333 45 4 1 49 X:13379576-13379650 6 CG1640 FBtr0339837|FBtr0073773|FBtr0073769|FBtr0073771|FBtr0073770|FBtr0073774|FBtr0073772 13379580|13379580|13379580|13379580|13379580|13379580|13379580 13380160|13380160|13380160|13380160|13380160|13380160|13380160 CCGTCC 6mer2-7 dme-miR-184-3p X + 13379569 13379653 stop_codon CG1640 FlyBase G46143.1 GAAGTACAAGTAGATCAGCTGCCAACTTCCCCGTCCTCGATCCCTGTGTTAAGTGTCAATCCTCCGGCTTAGGATTAAAAATTTA 30 13379609 0.765841305 11 27 225 0.904761905 1.579783597 0.261904762 0.366666667 0.547619048 30 4 0 38 X:13379569-13379653 6 26 921 FBgn0030478 719.3333333 33.57333333 51.13 0.036144578 0.774424146 0.508507725 -9 -10 -9.5 0.5 dme-miR-7-5p 6mer2-7 TCTTCC X 13409149 13409154 + X_13409149_13409154_+ 0.745478858 0.667729389 0.706604123 0.054977199 GstT4 FBtr0073778 13409034 13409323 X + 13409133 13409235 3'utr GstT4 FlyBase G61143.1 TTGTGATTATACTTGCTCTTCCTATCCAATAAGTCTTAGCCTTTCCATCACACTTGTTTTAACAATACCATTTGTGTCACGTAATGCTCATCTGTTTAAACGT 66 13409146 0.810226373 14 57 563 0.890243902 1.08517161 0.317073171 0.212121212 0.365853659 66 4 5 73 X:13409133-13409235 6 GstT4 FBtr0073778 13409034 13409323 TCTTCC 6mer2-7 dme-miR-7-5p X + 13409135 13409186 3'utr GstT4 FlyBase G46175.1 GTGATTATACTTGCTCTTCCTATCCAATAAGTCTTAGCCTTTCCATCACACT 27 13409146 0.708215918 9 25 238 0.9 1.255272505 0.05 0.37037037 0.575 27 3 1 36 X:13409135-13409186 6 26.5 922 FBgn0030484 325.7333333 32.05333333 48.2 0.081354892 0.826747088 0.549792531 3 3 3 0.5 dme-miR-252-5p 8mer-A1 GTACTTAA X 1356596 1356603 - X_1356596_1356603_- 0.441745934 0.425911304 0.433828619 0.011196753 png FBtr0070234 1356486 1356657 X - 1356536 1356629 3'utr png FlyBase G63997.1 GAGGAGACCTCAACAAATATTTCATTGTACTTAAGAACTAGGCTAGCTTAAGCGATAAATTAAGGTGTGTGCTGTGCTTTGTGTGCGCCTGTGC 20 1356604 0.989153272 7 19 183 0.956521739 1.342422681 0.043478261 0.1 0.217391304 20 1 0 22 X:1356536-1356629 8 png FBtr0070234 1356486 1356657 GTACTTAA 8mer-A1 dme-miR-252-5p X - 1356575 1356618 3'utr png FlyBase G48241.1 AACAAATATTTCATTGTACTTAAGAACTAGGCTAGCTTAAGCGA 7 1356604 0.703754787 4 7 54 1 0.903089987 0.125 0.142857143 0.25 7 0 0 8 X:1356575-1356618 8 11 923 FBgn0000826 56.66666667 6.136666667 9.246666667 0.194117647 1.792504074 1.18961788 1 1 1 0.5 dme-miR-14-3p 6mer3-8 AAGACT X 13660541 13660546 + X_13660541_13660546_+ 0.66363924 0.563857392 0.613748316 0.070556387 NFAT FBtr0301451 13658114 13661942 X + 13660491 13660578 3'utr NFAT FlyBase G61197.1 AGTGAAAGGCACTCGGATTTTACGGACCTCTCCCTTAGCAATCCCCTTCCAAGACTTATTCTCAGAAACCTGACCTAGGATTAAGAGG 14 13660549 0.98117135 8 13 99 0.933333333 1.146128036 0.4 0.071428571 0.133333333 14 1 0 14 X:13660491-13660578 6 NFAT FBtr0301451 13658114 13661942 AAGACT 6mer3-8 dme-miR-14-3p X + 13660513 13660564 3'utr NFAT FlyBase G46216.1 CGGACCTCTCCCTTAGCAATCCCCTTCCAAGACTTATTCTCAGAAACCTGAC 10 13660549 0.977973821 5 10 70 1 1.113943352 0.076923077 0.2 0.384615385 10 0 0 13 X:13660513-13660564 6 9.5 924 FBgn0030505 2159.646667 45.51666667 69.65666667 0.004398868 0.208714756 0.136383213 -8 -8 -8 0.5 dme-miR-34-5p 7mer-A1 ACTGCCA X 13663145 13663151 + X_13663145_13663151_+ 0.530930964 0.698191931 0.614561447 0.118271317 NFAT FBtr0073808|FBtr0301450|FBtr0345127|FBtr0301449|FBtr0340396|FBtr0112980 13662758|13662758|13662758|13662758|13658114|13662758 13663657|13663657|13663657|13664568|13663657|13663657 X + 13663092 13663172 5'utr NFAT FlyBase G61209.1 AAAAAACAAATGATGAACTTATCTCAAAAGGTTAAATTAAAACAATGATAACGACTGCCATATACCTATGAAATATGAAGT 65 13663138 0.747232815 10 58 328 0.890243902 1.86332286 0.085365854 0.169230769 0.341463415 65 9 0 73 X:13663092-13663172 7 NFAT FBtr0301449|FBtr0340396|FBtr0112980|FBtr0073808|FBtr0301450|FBtr0345127 13662758|13658114|13662758|13662758|13662758|13662758 13664568|13663657|13663657|13663657|13663657|13663657 ACTGCCA 7mer-A1 dme-miR-34-5p X + 13663099 13663185 5'utr NFAT FlyBase G46224.1 AAATGATGAACTTATCTCAAAAGGTTAAATTAAAACAATGATAACGACTGCCATATACCTATGAAATATGAAGTGAAATCCCGAAAG 46 13663139 0.969119468 9 43 235 0.9375 1.477121255 0.09375 0.391304348 0.5625 46 3 1 60 X:13663099-13663185 7 35.5 925 FBgn0030505 2159.646667 45.51666667 69.65666667 0.016437874 0.77993409 0.509642532 7 6 6.5 0.5 dme-miR-31a-5p 6mer3-8 TCTTGC X 13684305 13684310 + X_13684305_13684310_+ 0.659133915 0.844510008 0.751821961 0.131080697 CG11158 FBtr0073812 13684066 13684616 X + 13684284 13684319 3'utr CG11158 FlyBase G61216.1 CGAGTGATTGGCCAAATGATCTCTTGCATCACTATA 8 13684300 0.807112288 2 8 58 1 1.079181246 0.25 0.375 0.583333333 8 0 0 12 X:13684284-13684319 6 CG11158 FBtr0073812 13684066 13684616 TCTTGC 6mer3-8 dme-miR-31a-5p X + 13684282 13684317 3'utr CG11158 FlyBase G46230.1 TACGAGTGATTGGCCAAATGATCTCTTGCATCACTA 11 13684300 0.78245223 3 11 81 1 1.380211242 0 0.636363636 0.833333333 11 0 0 24 X:13684282-13684317 6 9.5 926 FBgn0030511 119.0866667 8.99 13.68666667 0.079773834 1.0567297 0.694106186 5 5 5 0.5 dme-miR-1006-3p 6mer2-7 GAATTT X 13684451 13684456 - X_13684451_13684456_- 0.71562185 0.665057246 0.690339548 0.035754642 CG9940 FBtr0073844 13684378 13685808 X - 13684417 13684478 3'utr CG9940 FlyBase G67256.1 ATGTAGATTTATAGCACATTGTGAATTTGAACACTCGCATCAGATCGATTTAATGGAACACT 12 13684460 0.986281462 5 12 102 1 1.146128036 0.071428571 0.166666667 0.285714286 12 0 0 14 X:13684417-13684478 6 CG9940 FBtr0073844 13684378 13685808 GAATTT 6mer2-7 dme-miR-1006-3p X - 13684442 13684482 3'utr CG9940 FlyBase G50633.1 AAGCATGTAGATTTATAGCACATTGTGAATTTGAACACTCG 7 13684452 0.847391069 5 7 58 1 1.113943352 0 0.428571429 0.692307692 7 0 0 13 X:13684442-13684482 6 8.5 927 FBgn0030512 1001.65 27.86666667 42.76666667 0.008485998 0.305023923 0.198752923 4 -4 0 0.5 dme-miR-307a-3p 7mer-m8 GGTTGTG X 13685072 13685078 - X_13685072_13685078_- 0.699333562 0.668113285 0.683723423 0.022076086 CG9940 FBtr0343352|FBtr0073844|FBtr0073845 13684551|13684378|13684551 13685808|13685808|13685808 X - 13685060 13685087 3'utr CG9940 FlyBase G67258.1 TGTGTTATTGGTTGTGTACGGTGCGGCT 6 13685073 0.656934328 3 5 56 1 0.954242509 0.444444444 0.333333333 0.555555556 6 0 0 9 X:13685060-13685087 7 CG9940 FBtr0073845|FBtr0343352|FBtr0073844 13684551|13684551|13684378 13685808|13685808|13685808 GGTTGTG 7mer-m8 dme-miR-307a-3p X - 13685059 13685088 3'utr CG9940 FlyBase G50634.1 TTGTGTTATTGGTTGTGTACGGTGCGGCTT 5 13685079 0.739103348 2 3 45 0.5 0.602059991 0.125 0.4 0.625 5 4 0 4 X:13685059-13685088 7 5 928 FBgn0030512 1001.65 27.86666667 42.76666667 0.004991764 0.179425837 0.116913484 -5 1 -2 0.5 dme-miR-79-3p 7mer-m8 TAGCTTT X 13719126 13719132 - X_13719126_13719132_- 0.606365427 0.498623551 0.552494489 0.076184957 CG9941 FBtr0073843 13718732 13719175 X - 13719108 13719151 3'utr CG9941 FlyBase G67268.2 GAAATTCGTTTTCTCGTTTTAGCTTTGCGTTTATACTATTTATT 11 13719130 0.610710672 4 8 125 0.866666667 1.113943352 0.333333333 0.181818182 0.4 11 2 0 13 X:13719108-13719151 7 CG9941 FBtr0073843 13718732 13719175 TAGCTTT 7mer-m8 dme-miR-79-3p X - 13719086 13719145 3'utr CG9941 FlyBase G50639.1 CGTTTTCTCGTTTTAGCTTTGCGTTTATACTATTTATTCGGAGTTCACCTAGATTTAGTT 6 13719133 0.98966561 4 6 60 1 0.903089987 0.125 0.333333333 0.5 6 0 0 8 X:13719086-13719145 7 6.5 929 FBgn0030514 1053.746667 41.08333333 63.20333333 0.006168466 0.15821501 0.102842677 -2 1 -0.5 0.5 dme-miR-8-3p 6mer2-7 AGTATT X 13780036 13780041 - X_13780036_13780041_- 0.497859072 0.962712947 0.730286009 0.328701274 CtsB1 FBtr0073838|FBtr0346091 13780014|13779845 13780176|13780176 X - 13780015 13780130 3'utr CtsB1 FlyBase G67327.1 ATTTTCTATCATCCCTCCTTTTATTTTCATTCCGATTCGCAACTGACGTTTGTAGTTAATGTAAACAACCTAAACCTGATTGATAATAAAGTATTGTATATGACTGTGGAACTGTA 221 13780060 0.897414174 26 207 1495 0.925531915 1.51355052 0.088652482 0.20361991 0.375886525 221 14 7 261 X:13780015-13780130 6 CtsB1 FBtr0346091|FBtr0073838 13779845|13780014 13780176|13780176 AGTATT 6mer2-7 dme-miR-8-3p X - 13780015 13780130 3'utr CtsB1 FlyBase G50687.1 ATTTTCTATCATCCCTCCTTTTATTTTCATTCCGATTCGCAACTGACGTTTGTAGTTAATGTAAACAACCTAAACCTGATTGATAATAAAGTATTGTATATGACTGTGGAACTGTA 136 13780051 0.81546364 23 128 896 0.930348259 2.271841607 0.084577114 0.338235294 0.552238806 136 14 0 187 X:13780015-13780130 6 76.5 930 FBgn0030521 559.3 47.37666667 71.83333333 0.136778116 1.614718919 1.064965197 19 10 14.5 0.5 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 13807165 13807171 + X_13807165_13807171_+ 0.565604943 0.658271049 0.611937996 0.065524828 inaE FBtr0073826 13805478 13807627 X + 13807148 13807187 3'utr inaE FlyBase G61282.1 AATTATGTTAAACGTTATCTAGTCTAAGGCCAACTATCGC 7 13807172 0.973002182 4 7 45 1 0.84509804 0 0 0 7 0 0 7 X:13807148-13807187 7 inaE FBtr0073826 13805478 13807627 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X + 13807152 13807187 3'utr inaE FlyBase G46278.1 ATGTTAAACGTTATCTAGTCTAAGGCCAACTATCGC 5 13807172 0.970308173 3 4 29 1 0.903089987 0 0.4 0.625 5 0 0 8 X:13807152-13807187 7 5 931 FBgn0261244 812.34 24.45 37.46 0.006155058 0.204498978 0.133475707 -7 -7 -7 0.5 dme-miR-305-5p 7mer-A1 GTACAAA X 13853450 13853456 - X_13853450_13853456_- 0.633091721 0.514813609 0.573952665 0.083635247 mamo FBtr0346001|FBtr0346002 13846114|13850846 13854098|13854098 X - 13853443 13853493 3'utr mamo FlyBase G67397.1 TTTACACCGATCTATAGAAGCTAACTAGCAACAATTTGTACAAAACAAACA 17 13853458 0.879365182 4 17 80 1 1.255272505 0.055555556 0.058823529 0.111111111 17 0 0 18 X:13853443-13853493 7 mamo FBtr0346001|FBtr0346002 13846114|13850846 13854098|13854098 GTACAAA 7mer-A1 dme-miR-305-5p X - 13853444 13853491 3'utr mamo FlyBase G50744.1 TACACCGATCTATAGAAGCTAACTAGCAACAATTTGTACAAAACAAAC 10 13853458 0.937335942 4 10 43 1 1.176091259 0 0.3 0.533333333 10 0 0 15 X:13853444-13853491 7 8.5 932 FBgn0267033 6198.503333 82.32 126.9666667 0.001371299 0.103255588 0.066946705 2 2 2 0.5 dme-miR-1008-3p 7mer-A1 GCTGTGA X 13866926 13866932 - X_13866926_13866932_- 0.716075295 0.729076758 0.722576026 0.009193449 mamo FBtr0346003|FBtr0346006 13858015|13865860 13869553|13869553 X - 13866900 13866957 5'utr mamo FlyBase G67404.1 AAAAACTTTTGGATTAAACAATTTGGCTGTGATAGCATTACAAGAATAGTAAATAATT 71 13866934 0.985963621 9 68 568 0.964285714 1.908485019 0.071428571 0.154929577 0.285714286 71 3 0 81 X:13866900-13866957 7 mamo FBtr0346003|FBtr0346006 13858015|13865860 13869553|13869553 GCTGTGA 7mer-A1 dme-miR-1008-3p X - 13866900 13866949 5'utr mamo FlyBase G50747.1 TTGGATTAAACAATTTGGCTGTGATAGCATTACAAGAATAGTAAATAATT 38 13866934 0.869907644 8 35 255 0.9 1.176091259 0.18 0.263157895 0.44 38 3 2 45 X:13866900-13866949 7 53 933 FBgn0267033 6198.503333 82.32 126.9666667 0.008550451 0.64382896 0.417432397 2 2 2 0.5 dme-miR-8-3p 6mer2-7 AGTATT X 1396976 1396981 + X_1396976_1396981_+ 0.606086 0.593134001 0.599610001 0.009158447 CG11448 FBtr0332292|FBtr0332291|FBtr0070225 1395684|1395374|1395374 1397337|1397337|1397337 X + 1396953 1397059 3'utr CG11448 FlyBase G57961.1 GAAAAGAAGATGGAGAGAAATTGAGTATTTGGTGAATTAATGTTAACTAAATTTATATACACATATACACATGCATTATACATAATATACTTTACTATATACTATGT 41 1396974 0.982932592 17 40 307 0.98 1.69019608 0.18 0.170731707 0.32 41 1 0 49 X:1396953-1397059 6 CG11448 FBtr0070225|FBtr0332291|FBtr0332292 1395374|1395374|1395684 1397337|1397337|1397337 AGTATT 6mer2-7 dme-miR-8-3p X + 1396956 1397012 3'utr CG11448 FlyBase G43855.1 AAGAAGATGGAGAGAAATTGAGTATTTGGTGAATTAATGTTAACTAAATTTATATAC 31 1396974 0.7763504 10 28 264 0.905660377 1.681241237 0.113207547 0.548387097 0.735849057 31 5 0 48 X:1396956-1397012 6 29.5 934 FBgn0024985 122.6666667 3.986666667 6.07 0.24048913 7.399665552 4.859967051 2 2 2 0.5 dme-miR-1012-3p 6mer3-8 TTGACT X 14258453 14258458 + X_14258453_14258458_+ 0.927783909 0.828766915 0.878275412 0.070015592 mud FBtr0332622|FBtr0308325|FBtr0308329|FBtr0308327|FBtr0308328 14258229|14258229|14258383|14258229|14256264 14258595|14258595|14258595|14258595|14258595 X + 14258367 14258474 stop_codon mud FlyBase G61371.1 ATGTTCAAGCGCAAGTAGGCGTGGTCGCAGTCGCAGTATTATACATATATTCCCCCATTCGTGTACATCAATCGGAACTTGAATTCTTGACTTATTATTTATGTAACC 48 14258453 0.985231866 14 47 391 0.980769231 1.707570176 0.057692308 0.083333333 0.153846154 48 1 0 51 X:14258367-14258474 6 mud FBtr0308327|FBtr0308325|FBtr0308329|FBtr0308328|FBtr0332622 14258229|14258229|14258383|14256264|14258229 14258595|14258595|14258595|14258595|14258595 TTGACT 6mer3-8 dme-miR-1012-3p X + 14258374 14258474 stop_codon mud FlyBase G46345.1 AGCGCAAGTAGGCGTGGTCGCAGTCGCAGTATTATACATATATTCCCCCATTCGTGTACATCAATCGGAACTTGAATTCTTGACTTATTATTTATGTAACC 36 14258453 0.86437693 11 32 294 0.919354839 1.45484486 0.032258065 0.472222222 0.693548387 36 4 1 57 X:14258374-14258474 6 20 935 FBgn0002873 2508.803333 43.92333333 67.46333333 0.007971928 0.455338848 0.296457335 0 0 0 0.5 dme-miR-305-5p 7mer-A1 GTACAAA X 1481381 1481387 + X_1481381_1481387_+ 0.455525135 0.517667763 0.486596449 0.043941525 rush FBtr0070259|FBtr0339589 1480188|1480188 1481420|1481420 X + 1481262 1481420 3'utr rush FlyBase G57989.1 GTTCCCGTTTTTGGCGGATAAGAACCACTAAAATCGTATGTTTGGCGAGAGGATAAACTATATGGATATGTATACAACATAAGCAATTTGCAATTGCGATCATTAACTGTTTTCTATTTGTACAAAGCCCAAAAAACAATAAATTAATACTGTAAATTG 95 1481379 0.986358411 23 87 743 0.930434783 1.427323786 0.086956522 0.168421053 0.313043478 95 5 3 107 X:1481262-1481420 7 rush FBtr0070259|FBtr0339589 1480188|1480188 1481420|1481420 GTACAAA 7mer-A1 dme-miR-305-5p X + 1481018 1481399 3'utr rush FlyBase G43871.1 AACGGAAGCGATGCGAGCAGGAGGAGATTAAGGAGCTGCGCAAGATGACGGCATTCAAGGCTCGTCCGAATCCATTTAAATAGTGCTCGACGGAACCAATCGACTACCAAACGTTTGATAGCCCTGTCCAAATTTAAATGAAGTGAAGTCGATGCTACACATAATCGTGTTTACCGATGCATAGTTTTACCAGATTAACACAATTTTTGTCTCTTAACATTAACATTACTTTTACGCATATATCGTTCCCGTTTTTGGCGGATAAGAACCACTAAAATCGTATGTTTGGCGAGAGGATAAACTATATGGATATGTATACAACATAAGCAATTTGCAATTGCGATCATTAACTGTTTTCTATTTGTACAAAGCCCAAAAAACA 146 1481378 0.991576417 53 137 1106 0.948356808 2.305351369 0.079812207 0.363013699 0.563380282 146 11 0 202 X:1481018-1481399 7 31.5 936 FBgn0025381 3553.903333 199.46 304.35 0.008863494 0.157926401 0.103499261 2 3 2.5 0.5 dme-miR-31a-5p 7mer-m8 TCTTGCC X 14851077 14851083 - X_14851077_14851083_- 0.582730379 0.626473932 0.604602155 0.030931325 CG9521 FBtr0073985 14851003 14851256 X - 14851047 14851176 3'utr CG9521 FlyBase G67488.1 ATCACACCTTAAATGCAATGGCCAGTGTAAAATGGGGCTTTAGTTTTAGTTAAGGCCTTCGAAAACTTTTTGTTATTATGTGTAGTAATTCTTTCTTGCCTGAACTGATTCTAGTTTAAGATTTAGTTAT 85 14851081 0.898483573 19 72 801 0.848484848 1.62324929 0.090909091 0.141176471 0.262626263 85 14 1 84 X:14851047-14851176 7 CG9521 FBtr0073985 14851003 14851256 TCTTGCC 7mer-m8 dme-miR-31a-5p X - 14851039 14851103 3'utr CG9521 FlyBase G50803.1 TATTATGTGTAGTAATTCTTTCTTGCCTGAACTGATTCTAGTTTAAGATTTAGTTATATAAGCAT 45 14851081 0.613340139 11 43 437 0.948275862 1.740362689 0.103448276 0.244444444 0.413793103 45 3 0 55 X:14851039-14851103 7 47 937 FBgn0030588 765.0066667 37.97666667 54.6 0.061437373 1.237602036 0.860805861 -2 -2 -2 0.5 dme-miR-308-3p 7mer-m1 TGTGATT X 14934583 14934589 - X_14934583_14934589_- 0.434915409 0.445933546 0.440424477 0.007790973 pdgy FBtr0303294|FBtr0343521|FBtr0073972|FBtr0308838 14933668|14934038|14934038|14934038 14934629|14934629|14934629|14934629 X - 14934576 14934612 3'utr pdgy FlyBase G67498.1 CTTCGTAGGCTAAGAAATATTTTTGTGATTTTTTTTT 21 14934591 0.701898922 5 21 265 1 1.397940009 0.12 0.142857143 0.28 21 0 0 25 X:14934576-14934612 7 pdgy FBtr0303294|FBtr0343521|FBtr0073972|FBtr0308838 14933668|14934038|14934038|14934038 14934629|14934629|14934629|14934629 TGTGATT 7mer-m1 dme-miR-308-3p X - 14934578 14934613 3'utr pdgy FlyBase G50810.1 TCTTCGTAGGCTAAGAAATATTTTTGTGATTTTTTT 10 14934591 0.677574682 6 10 121 1 1.113943352 0 0.3 0.461538462 10 0 0 13 X:14934578-14934613 7 15 938 FBgn0027601 126.1633333 5.696666667 8.713333333 0.118893498 2.633118783 1.721499617 2 2 2 0.5 dme-bantam-3p 6mer3-8 TGATCT X 15032981 15032986 + X_15032981_15032986_+ 0.993923746 0.995575678 0.994749712 0.00116814 be FBtr0073956 15032682 15042060 X + 15032937 15032995 3'utr be FlyBase G61415.1 GAAATACCTATTGAAAAAAACATGAAATACGCTAAACGAAACTTTGATCTGTATATAAA 20 15032981 0.972342583 7 20 118 1 1.342422681 0.090909091 0.05 0.136363636 20 0 0 22 X:15032937-15032995 6 be FBtr0073956 15032682 15042060 TGATCT 6mer3-8 dme-bantam-3p X + 15032949 15032995 3'utr be FlyBase G46376.1 GAAAAAAACATGAAATACGCTAAACGAAACTTTGATCTGTATATAAA 16 15032989 0.878212254 5 16 90 1 1.414973348 0 0.375 0.615384615 16 0 0 26 X:15032949-15032995 6 13.5 939 FBgn0052594 1740.783333 62.23 95.48 0.007755129 0.216937169 0.141390867 0 -8 -4 0.5 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT X 15051502 15051508 + X_15051502_15051508_+ 0.537230981 0.593049049 0.565140015 0.039469286 CG5541 FBtr0073959|FBtr0073958 15051108|15051108 15051842|15051842 X + 15051485 15051531 3'utr CG5541 FlyBase G61432.1 AATTTAAAGCCAAAATGTGGTGCTCTTAAATGTATATGCTACATATG 42 15051501 0.845618218 7 41 330 0.960784314 1.69019608 0.176470588 0.19047619 0.333333333 42 2 0 49 X:15051485-15051531 7 CG5541 FBtr0073959|FBtr0073958 15051108|15051108 15051842|15051842 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" X + 15051485 15051522 3'utr CG5541 FlyBase G46393.1 AATTTAAAGCCAAAATGTGGTGCTCTTAAATGTATATG 11 15051501 0.78149501 4 10 73 0.941176471 1.204119983 0.235294118 0.454545455 0.647058824 11 1 0 16 X:15051485-15051522 7 26.5 940 FBgn0030603 416.6633333 20.09 30.71333333 0.063600509 1.319064211 0.862817452 1 1 1 0.5 dme-miR-34-5p 8mer-A1 CACTGCCA X 15064479 15064486 + X_15064479_15064486_+ 0.564562271 0.607099054 0.585830663 0.03007806 CG5548 FBtr0073960|FBtr0340425|FBtr0340424 15064402|15064402|15064402 15064548|15064548|15064926 X + 15064455 15064524 3'utr CG5548 FlyBase G61434.1 AGGCGACGCTCCTGGCCGCGGATTCACTGCCACTGCCCCATGTTGCAAGCTAGTTTCCAGCGGAAATGTC 23 15064477 0.954425967 5 23 104 1 1.491361694 0.193548387 0.217391304 0.419354839 23 0 0 31 X:15064455-15064524 8 CG5548 FBtr0340424 15064402 15064926 CACTGCCA 8mer-A1 dme-miR-34-5p X + 15064462 15064502 3'utr CG5548 FlyBase G46394.1 GCTCCTGGCCGCGGATTCACTGCCACTGCCCCATGTTGCAA 8 15064477 0.960478759 3 7 34 0.909090909 1 0.181818182 0.25 0.454545455 8 1 0 10 X:15064462-15064502 8 14 941 FBgn0030605 769.6633333 180.22 277.04 0.018189771 0.077682832 0.050534219 2 2 2 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 15069031 15069036 + X_15069031_15069036_+ 0.626430726 0.483769293 0.55510001 0.100876843 dob FBtr0073961|FBtr0073961|FBtr0073961 15068864|15068864|15068864 15069091|15069091|15069091 X + 15069011 15069045 3'utr dob FlyBase G61438.1 TTTTTTTTATGTACTGACTGCTGTGAACAAAATAA 28 15069030 0.699729444 5 27 166 0.966666667 1.462397998 0.033333333 0.071428571 0.133333333 28 1 0 29 X:15069011-15069045 6 dob FBtr0073961|FBtr0073961|FBtr0073961 15068864|15068864|15068864 15069091|15069091|15069091 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X + 15069019 15069048 3'utr dob FlyBase G46398.1 ATGTACTGACTGCTGTGAACAAAATAAATT 23 15069030 0.691427492 4 22 114 0.972972973 1.556302501 0 0.47826087 0.675675676 23 1 0 36 X:15069019-15069048 6 25.5 942 FBgn0030607 31.33333333 1.986666667 2.963333333 0.813829787 12.83557047 8.605174353 1 1 1 0.5 dme-miR-277-3p 8mer-A1 TGCATTTA X 15088496 15088503 + X_15088496_15088503_+ 0.462601384 0.388100848 0.425351116 0.052679879 CG5599 FBtr0073964 15088247 15088629 X + 15088477 15088509 3'utr CG5599 FlyBase G61448.1 ACTTTTATCGTTGTTAACCTGCATTTATATATC 11 15088490 0.665580778 4 11 110 1 1.041392685 0.090909091 0 0 11 0 0 11 X:15088477-15088509 8 CG5599 FBtr0073964 15088247 15088629 TGCATTTA 8mer-A1 dme-miR-277-3p X + 15088485 15088508 3'utr CG5599 FlyBase G46407.1 CGTTGTTAACCTGCATTTATATAT 8 15088489 0.667608041 4 5 79 0.727272727 0.602059991 0 0.375 0.545454545 8 2 1 8 X:15088485-15088508 8 9.5 943 FBgn0030612 84.33666667 5.47 8.336666667 0.112643769 1.736745887 1.139544182 6 7 6.5 0.5 dme-miR-1003-3p 6mer3-8 ATGTGA X 1516418 1516423 + X_1516418_1516423_+ 0.990103877 0.625917517 0.808010697 0.257518673 inc FBtr0339591|FBtr0070260|FBtr0339590 1515389|1515389|1515389 1517615|1517615|1517137 X + 1516319 1516438 3'utr inc FlyBase G57997.1 GTTTTGTGTAGGCCCGGTTTTACTACCTTGAGCTTTATTTTAGAAAACGAGCAAGGCGAAGATCAACTTTAGGAAATCAATTGAATCACGACTGAATTTATGTGAACTTGCACTCAAAGA 22 1516416 0.983555366 11 20 159 0.884615385 1.06069784 0.115384615 0.090909091 0.230769231 22 2 1 23 X:1516319-1516438 6 inc FBtr0070260|FBtr0339590|FBtr0339591 1515389|1515389|1515389 1517615|1517137|1517615 ATGTGA 6mer3-8 dme-miR-1003-3p X + 1516388 1516476 3'utr inc FlyBase G43879.1 TAGGAAATCAATTGAATCACGACTGAATTTATGTGAACTTGCACTCAAAGAAAATACATACATGCGAATACATTATAGTGAGGATATAC 21 1516400 0.974942179 12 21 129 1 1.51851394 0.121212121 0.428571429 0.636363636 21 0 0 33 X:1516388-1516476 6 11.5 944 FBgn0025394 956.7333333 41.24 63.02 0.012020068 0.27885548 0.182481752 2 18 10 0.5 dme-miR-970-3p 7mer-A1 CTTATGA X 15327101 15327107 + X_15327101_15327107_+ 0.51590601 0.349971257 0.432938633 0.117333552 Top1 FBtr0100294|FBtr0340434 15325917|15325917 15328029|15328029 X + 15327063 15327124 3'utr Top1 FlyBase G61499.1 TGGATGGATCTCGATGTGGTTTCGCTTTGATTTCGTACCTTATGATCATTTTAGTTAACATT 15 15327105 0.881818272 6 15 165 1 1.230448921 0 0.133333333 0.235294118 15 0 0 17 X:15327063-15327124 7 Top1 FBtr0100294|FBtr0340434 15325917|15325917 15328029|15328029 CTTATGA 7mer-A1 dme-miR-970-3p X + 15327051 15327124 3'utr Top1 FlyBase G46446.1 ACAAAGCCACATTGGATGGATCTCGATGTGGTTTCGCTTTGATTTCGTACCTTATGATCATTTTAGTTAACATT 14 15327105 0.964706856 6 14 143 1 1.397940009 0 0.357142857 0.64 14 0 0 25 X:15327051-15327124 7 10.5 945 FBgn0004924 1711.443333 50.77666667 78.29333333 0.006135172 0.206787895 0.134111035 -4 -4 -4 0.5 dme-miR-307a-3p 6mer2-7 GTTGTG X 15735658 15735663 + X_15735658_15735663_+ 0.535728999 0.865638108 0.700683553 0.233280962 l(1)G0136 FBtr0074084|FBtr0332613 15735491|15735491 15735780|15735780 X + 15735647 15735758 3'utr l(1)G0136 FlyBase G61671.1 CTAAATATTAAGTTGTGTTCTATAGTTAAATTTTAGTTGTAGCGCTAGGTAAGTGACGCACCCGCTTCCTTGCCGCAGGCTGGCAGTTTGTCCTCTTTAGCCCTAGTTCAAT 17 15735659 0.991393947 9 17 186 1 1.255272505 0.055555556 0.058823529 0.111111111 17 0 0 18 X:15735647-15735758 6 l(1)G0136 FBtr0332613|FBtr0074084 15735491|15735491 15735780|15735780 GTTGTG 6mer2-7 dme-miR-307a-3p X + 15735649 15735701 3'utr l(1)G0136 FlyBase G46567.1 AAATATTAAGTTGTGTTCTATAGTTAAATTTTAGTTGTAGCGCTAGGTAAGTG 11 15735659 0.993122932 7 10 115 0.842105263 1.204119983 0.105263158 0.454545455 0.684210526 11 3 0 16 X:15735649-15735701 6 8.5 946 FBgn0026666 97.33333333 15.83666667 24.21333333 0.087328767 0.53672911 0.351046256 -1 -1 -1 0.5 dme-miR-184-3p 6mer2-7 CCGTCC X 15742467 15742472 - X_15742467_15742472_- 0.729951486 0.579493939 0.654722713 0.106389589 CG8944 FBtr0074201 15741341 15743214 X - 15742396 15742538 3'utr CG8944 FlyBase G67672.1 TCTTCTCTCCAGACACACACAGCATTACAATCTGATTATTGATGTAAGAATTGTATACATTCCTTCCCGTCCCGCGATAATCGATGTGAGCGAGTAGATGCATTCCAGAACTAAGTATTTCATAAAGTATTCTATGTACTAAC 57 15742476 0.977225945 12 56 368 0.985714286 1.838849091 0.085714286 0.210526316 0.357142857 57 1 0 69 X:15742396-15742538 6 CG8944 FBtr0074201 15741341 15743214 CCGTCC 6mer2-7 dme-miR-184-3p X - 15742392 15742520 3'utr CG8944 FlyBase G50931.1 ACAGCATTACAATCTGATTATTGATGTAAGAATTGTATACATTCCTTCCCGTCCCGCGATAATCGATGTGAGCGAGTAGATGCATTCCAGAACTAAGTATTTCATAAAGTATTCTATGTACTAACTATA 46 15742475 0.977517176 12 42 283 0.940298507 1.498310554 0.28358209 0.260869565 0.492537313 46 3 1 63 X:15742392-15742520 6 37 947 FBgn0030680 574.6266667 15.99666667 24.55666667 0.064389633 2.312981871 1.506719153 4 3 3.5 0.5 dme-miR-317-3p 7mer-A1 GTGTTCA X 15825573 15825579 + X_15825573_15825579_+ 0.749647974 0.657890607 0.703769291 0.06488228 sd FBtr0112826|FBtr0074101|FBtr0308134|FBtr0310311|FBtr0074100|FBtr0346799|FBtr0308133|FBtr0308130|FBtr0308129|FBtr0112824|FBtr0112825|FBtr0112827|FBtr0074099|FBtr0308128|FBtr0340115|FBtr0308131|FBtr0308132|FBtr0301543|FBtr0301544 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15825722|15825722|15825722|15825722|15825722|15827682|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15827681|15826608|15825722|15825722 X + 15825515 15825616 3'utr sd FlyBase G61757.1 AAAAAAACCACATGGCAGGGGACAATGGAAGAGCCTCAAAACAAGAGATGATTGATTGGTGTTCAGTATCGAAATCAGATTTTTATTTGTGCAAAATAAAAA 36 15825568 0.94907559 15 33 206 0.928571429 1.591064607 0.166666667 0.111111111 0.238095238 36 3 0 39 X:15825515-15825616 7 sd FBtr0346799|FBtr0301543|FBtr0308130|FBtr0308132|FBtr0074101|FBtr0308129|FBtr0112824|FBtr0310311|FBtr0074099|FBtr0308128|FBtr0308131|FBtr0074100|FBtr0301544|FBtr0308133|FBtr0112825|FBtr0112827|FBtr0112826|FBtr0340115|FBtr0308134 15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447|15824447 15827682|15825722|15825722|15826608|15825722|15825722|15825722|15825722|15825722|15825722|15827681|15825722|15825722|15825722|15825722|15825722|15825722|15825722|15825722 GTGTTCA 7mer-A1 dme-miR-317-3p X + 15825557 15825613 3'utr sd FlyBase G46631.1 AAGAGATGATTGATTGGTGTTCAGTATCGAAATCAGATTTTTATTTGTGCAAAATAA 7 15825573 0.982724955 4 7 57 1 0.954242509 0.222222222 0.285714286 0.444444444 7 0 0 9 X:15825557-15825613 7 10 948 FBgn0003345 3188.213333 125.3966667 192.3633333 0.003136553 0.079746936 0.051984959 5 0 2.5 0.5 dme-bantam-3p 8mer-A1 TGATCTCA X 15825755 15825762 + X_15825755_15825762_+ 0.470193869 0.475079601 0.472636735 0.003454712 sd FBtr0346799|FBtr0308131|FBtr0308132 15824447|15824447|15824447 15827682|15827681|15826608 X + 15825728 15825784 3'utr sd FlyBase G61759.1 AAAAACAAAAAAAAAAATACATTTAAATGATCTCAAAGTTACTTAAAACATATTTTT 691 15825754 0.966940761 12 668 4799 0.97260274 2.152288344 0.180365297 0.218523878 0.383561644 691 19 5 852 X:15825728-15825784 8 sd FBtr0346799|FBtr0308132|FBtr0308131 15824447|15824447|15824447 15827682|15826608|15827681 TGATCTCA 8mer-A1 dme-bantam-3p X + 15825730 15825801 3'utr sd FlyBase G46633.1 AAACAAAAAAAAAAATACATTTAAATGATCTCAAAGTTACTTAAAACATATTTTTTGTGTATAATTTTTTTT 588 15825754 0.981386736 13 561 4084 0.957972806 1.986211716 0.196538937 0.294217687 0.487021014 588 27 7 775 X:15825730-15825801 8 637.5 949 FBgn0003345 3188.213333 125.3966667 192.3633333 0.199955252 5.083867195 3.314041137 1 1 1 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 15887724 15887729 - X_15887724_15887729_- 0.51769953 0.495502019 0.506600774 0.015696003 MSBP FBtr0301598|FBtr0301598|FBtr0301598|FBtr0333719|FBtr0333719|FBtr0333719|FBtr0074166|FBtr0074166|FBtr0074166 15887565|15887565|15887565|15887565|15887565|15887565|15887565|15887565|15887565 15888035|15888035|15888035|15888035|15888035|15888035|15888035|15888035|15888035 X - 15887570 15887783 3'utr MSBP FlyBase G67853.1 CTTAGAGTGCAGCCTTGACAAAAGCTATAGTTGTTACTATAATTCACGTTGTGATGTGATCTTGTTCCATATATTATAGTCGTATATTCATACAAATGTAACAAACGGAAATCATAAAATTATTTAAGGAGGAGGCCAATGTGTGGAGGGTATGGGAGTCATTTTCGTGGCAATATAAATTTAAATGTAACTATATTTGAAATACAAATTAAAT 109 15887722 0.986928977 32 109 941 1 2.123851641 0.210526316 0.174311927 0.323308271 109 0 0 133 X:15887570-15887783 6 MSBP FBtr0301598|FBtr0301598|FBtr0301598|FBtr0333719|FBtr0333719|FBtr0333719|FBtr0074166|FBtr0074166|FBtr0074166 15887565|15887565|15887565|15887565|15887565|15887565|15887565|15887565|15887565 15888035|15888035|15888035|15888035|15888035|15888035|15888035|15888035|15888035 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 15887693 15887769 3'utr MSBP FlyBase G51080.1 TTGACAAAAGCTATAGTTGTTACTATAATTCACGTTGTGATGTGATCTTGTTCCATATATTATAGTCGTATATTCAT 55 15887722 0.991410554 12 50 541 0.931818182 1.436692598 0.125 0.454545455 0.659090909 55 4 2 82 X:15887693-15887769 6 60.5 950 FBgn0030703 1227.653333 105.4533333 161.41 0.049281013 0.573713491 0.374821882 -7 -7 -7 0.5 dme-miR-965-3p 7mer-m8 TACGCTT X 15944222 15944228 + X_15944222_15944228_+ 0.316809825 0.493179122 0.404994473 0.124711928 CG8924 FBtr0074130 15944054 15944449 X + 15944203 15944279 3'utr CG8924 FlyBase G61872.1 ATACATAGGTTTACTTAATTACGCTTTGGAGATGCCACAGTTTTATCCTTGGTTGAAAAACTCTTGCCGTTCAATCA 38 15944221 0.833567663 6 36 342 0.954545455 1.62324929 0.431818182 0.131578947 0.25 38 2 0 42 X:15944203-15944279 7 CG8924 FBtr0074130 15944054 15944449 TACGCTT 7mer-m8 dme-miR-965-3p X + 15944203 15944243 3'utr CG8924 FlyBase G46725.1 ATACATAGGTTTACTTAATTACGCTTTGGAGATGCCACAGT 27 15944221 0.658914449 5 26 259 0.955555556 1.633468456 0.577777778 0.407407407 0.644444444 27 2 0 43 X:15944203-15944243 7 29.5 951 FBgn0030710 226.3333333 10.62 16.19333333 0.130338733 2.777777778 1.82173734 1 1 1 0.5 "dme-miR-275-3p,dme-miR-306-5p" 8mer-A1 GTACCTGA X 16284201 16284208 + X_16284201_16284208_+ 0.658306864 0.670411825 0.664359344 0.008559457 eas FBtr0308617|FBtr0343520|FBtr0308618 16283732|16283732|16283732 16285618|16285618|16285618 X + 16284146 16284226 3'utr eas FlyBase G61942.1 GGCGACCAAACCCATGCCGATGATTTGGAAGAAGACGCAGAGCTTTCTTGATTTAGTACCTGAACGTTTTAGTGATGCTGA 23 16284198 0.98959922 11 22 208 0.931034483 1.431363764 0.172413793 0.260869565 0.413793103 23 2 0 27 X:16284146-16284226 8 eas FBtr0308618|FBtr0343520|FBtr0308617 16283732|16283732|16283732 16285618|16285618|16285618 GTACCTGA 8mer-A1 "dme-miR-275-3p,dme-miR-306-5p" X + 16284156 16284225 3'utr eas FlyBase G46774.1 CCCATGCCGATGATTTGGAAGAAGACGCAGAGCTTTCTTGATTTAGTACCTGAACGTTTTAGTGATGCTG 9 16284198 0.989194274 7 8 75 0.857142857 1.079181246 0.357142857 0.444444444 0.642857143 9 2 0 12 X:16284156-16284225 8 13 952 FBgn0000536 1202.386667 57.26666667 87.69666667 0.01081183 0.227008149 0.148238245 3 3 3 0.5 dme-bantam-3p 6mer3-8 TGATCT X 16317820 16317825 - X_16317820_16317825_- 0.942018169 0.817728726 0.879873447 0.087885948 Cyp1 FBtr0074238 16317671 16318181 X - 16317798 16317874 3'utr Cyp1 FlyBase G68038.1 AAGAAAAACAATGAGACGACAAGAGTCGAGAGGGGCTTAGAAAAATGTTTGATCTTTTGATGTTGGCTTACTTACTA 37 16317826 0.999985575 10 36 351 0.978723404 1.662757832 0.14893617 0.243243243 0.404255319 37 1 0 46 X:16317798-16317874 6 Cyp1 FBtr0074238 16317671 16318181 TGATCT 6mer3-8 dme-bantam-3p X - 16317802 16317876 3'utr Cyp1 FlyBase G51208.1 AGAAGAAAAACAATGAGACGACAAGAGTCGAGAGGGGCTTAGAAAAATGTTTGATCTTTTGATGTTGGCTTACTT 29 16317819 0.987721101 9 27 250 0.934782609 1.156347201 0.239130435 0.379310345 0.608695652 29 1 2 43 X:16317802-16317876 6 27 953 FBgn0004432 7157.433333 716.86 1097.683333 0.003772302 0.037664258 0.024597258 1 -6 -2.5 0.5 dme-miR-277-3p 7mer-m8 TGCATTT X 16318110 16318116 - X_16318110_16318116_- 0.448767954 0.571597885 0.510182919 0.086853855 Cyp1 FBtr0074238 16317671 16318181 X - 16318100 16318162 3'utr Cyp1 FlyBase G68041.1 AACAGCAACATTGCAAGAAGAAAAATCTGTTAAGACGAAAACCATTTGCATTTTCTCCAAAAC 26 16318117 0.850893062 8 24 139 0.9375 1.477121255 0.125 0.192307692 0.34375 26 2 0 30 X:16318100-16318162 7 Cyp1 FBtr0074238 16317671 16318181 TGCATTT 7mer-m8 dme-miR-277-3p X - 16318100 16318159 3'utr Cyp1 FlyBase G51210.1 AGCAACATTGCAAGAAGAAAAATCTGTTAAGACGAAAACCATTTGCATTTTCTCCAAAAC 19 16318116 0.80387963 8 18 109 0.958333333 1.361727836 0.041666667 0.263157895 0.416666667 19 1 0 23 X:16318100-16318159 7 15 954 FBgn0004432 7157.433333 716.86 1097.683333 0.002095723 0.020924588 0.013665143 1 0 0.5 0.5 "dme-miR-995-3p,dme-miR-998-3p" 7mer-m8 TGGTGCT X 16321797 16321803 - X_16321797_16321803_- 0.460998425 0.55493534 0.507966882 0.066423419 CG9917 FBtr0331756|FBtr0074237 16321429|16321429 16322047|16322047 X - 16321741 16321830 3'utr CG9917 FlyBase G68048.3 AGGCTAGCCAGCCATATCGTTTTTGTTTGGTGCTTCTAATTTATGTAATTAATTGCCAATTGATGTATGTATGTATGTAGTATTGTAAAC 48 16321804 0.81168328 13 47 592 1 1.770852012 0.169491525 0.166666667 0.322033898 48 0 0 59 X:16321741-16321830 7 CG9917 FBtr0331756|FBtr0074237 16321429|16321429 16322047|16322047 TGGTGCT 7mer-m8 "dme-miR-995-3p,dme-miR-998-3p" X - 16321655 16321831 3'utr CG9917 FlyBase G51220.1 CAGGCTAGCCAGCCATATCGTTTTTGTTTGGTGCTTCTAATTTATGTAATTAATTGCCAATTGATGTATGTATGTATGTAGTATTGTAAACAATGCTTATACTTCCTTCTAGTTTTACTTCTGAATCAGAAATTCTTCTGGCCTTTGTCATGCGTTTATCTAATGCTTTATTTCCGT 49 16321804 0.994765471 14 43 591 0.926470588 1.799340549 0.235294118 0.285714286 0.485294118 49 5 0 63 X:16321655-16321831 7 35.5 955 FBgn0030740 1612.983333 110.1633333 169.58 0.022008907 0.322248782 0.209340724 1 1 1 0.5 dme-miR-2a-2-5p 7mer-A1 GATGAGA X 16339340 16339346 + X_16339340_16339346_+ 0.59068184 0.619542477 0.605112158 0.020407597 Dsp1 FBtr0089259|FBtr0089263|FBtr0089261|FBtr0089260 16337806|16337806|16337806|16337806 16340443|16340624|16340443|16340443 X + 16339190 16339521 3'utr Dsp1 FlyBase G62031.1 AGCCACGATCATAAGATACGGAAAGTTAGTCTTGGTTGGTTCGGTGCGCTTCGTGATGAGGTGGGAAGCAACCGCAACGCTGTCGTCGGACATTGCAACAATTGTTGTTGACTTGGCTGGCCATGTATATACTATTTGAAGTATTATTTAGATGAGACTACGTAGAAATTAACAAGAATCGAGAGCAAATAACGACATCATACAAGCCTAATATTAGAGTAGATTTCAGCGGGCCTGCAAAGTAATGTAAATTGCGTAGAAACCTTGAATATATTGTAGACTAGTTTTTTGAGGACTAGTATTGCCCAAAATGTTCCAGGCACAGAAACAGA 333 16339342 0.980574246 46 322 2376 0.971279373 2.57054294 0.224543081 0.138138138 0.250652742 333 11 0 372 X:16339190-16339521 7 Dsp1 FBtr0089261|FBtr0089260|FBtr0089259|FBtr0089263 16337806|16337806|16337806|16337806 16340443|16340443|16340443|16340624 GATGAGA 7mer-A1 dme-miR-2a-2-5p X + 16339276 16339442 3'utr Dsp1 FlyBase G46848.1 CGGACATTGCAACAATTGTTGTTGACTTGGCTGGCCATGTATATACTATTTGAAGTATTATTTAGATGAGACTACGTAGAAATTAACAAGAATCGAGAGCAAATAACGACATCATACAAGCCTAATATTAGAGTAGATTTCAGCGGGCCTGCAAAGTAATGTAAATT 167 16339342 0.978834893 22 159 1207 0.953846154 2.394451681 0.207692308 0.407185629 0.619230769 167 12 0 248 X:16339276-16339442 7 182.5 956 FBgn0011764 2716.763333 96.47 148.13 0.067175524 1.891779828 1.232025923 -2 -2 -2 0.5 dme-miR-1008-3p 8mer-A1 AGCTGTGA X 16379038 16379045 + X_16379038_16379045_+ 0.403565445 0.475135072 0.439350258 0.05060742 Fur2 FBtr0301300 16377374 16381545 X + 16378985 16379052 3'utr Fur2 FlyBase G62086.1 TTCCCTGCGAGCCCAACTGTGCCTCATGCCAGGACCATCCCGAGTACTGCACTAGCTGTGATCACCAT 15 16379037 0.966416038 7 13 70 0.933333333 0.84509804 0 0 0 15 0 1 14 X:16378985-16379052 8 Fur2 FBtr0301300 16377374 16381545 AGCTGTGA 8mer-A1 dme-miR-1008-3p X + 16379021 16379058 3'utr Fur2 FlyBase G46889.1 ATCCCGAGTACTGCACTAGCTGTGATCACCATTTGGTT 14 16379037 0.781898946 6 14 90 1 1.301029996 0.1 0.428571429 0.6 14 0 0 20 X:16379021-16379058 8 12.5 957 FBgn0004598 1868.423333 38.93666667 59.46333333 0.006690133 0.321034158 0.210213577 1 1 1 0.5 dme-miR-252-5p 8mer-A1 GTACTTAA X 16388000 16388007 + X_16388000_16388007_+ 0.432597853 0.49811491 0.465356381 0.046327515 CG4239 FBtr0340314|FBtr0074268|FBtr0074270|FBtr0074269 16387959|16387959|16387959|16387959 16388702|16388702|16388702|16388702 X + 16387950 16388035 stop_codon CG4239 FlyBase G62102.1 AGAGCAACTAAAACTATTTGTAGTCAGCCCCATCTTCCCCCGGACAAATAGTACTTAACGCTGCCAGCCAAAGCTAACGCCTAAAA 39 16387998 0.958284295 8 35 168 0.925 1.568201724 0.15 0.025641026 0.05 39 3 0 37 X:16387950-16388035 8 CG4239 FBtr0074270|FBtr0074269|FBtr0340314|FBtr0074268 16387959|16387959|16387959|16387959 16388702|16388702|16388702|16388702 GTACTTAA 8mer-A1 dme-miR-252-5p X + 16387972 16388024 3'utr CG4239 FlyBase G46901.1 GTCAGCCCCATCTTCCCCCGGACAAATAGTACTTAACGCTGCCAGCCAAAGCT 17 16387998 0.932983327 6 15 66 0.875 1.322219295 0.166666667 0.294117647 0.5 17 3 0 21 X:16387972-16388024 8 20.5 958 FBgn0030745 456.7933333 30.29666667 46.16666667 0.044878063 0.676642095 0.444043321 2 2 2 0.5 dme-miR-33-5p 8mer-A1 CAATGCAA X 16436888 16436895 + X_16436888_16436895_+ 0.495326083 0.402811551 0.449068817 0.06541763 hang FBtr0343571|FBtr0290069|FBtr0074276 16436811|16436811|16436732 16438454|16438454|16438454 X + 16436808 16436927 stop_codon hang FlyBase G62141.1 ATTGAGTGATCATACTCCAACTACAACTCCAACTACCACTACCACTACCAACCACAACTACCAACCACACCTCATCATCTCAATGCAAAATCACTTGAAATGTACAAAGCCAATCCAATC 48 16436908 0.949845876 13 47 206 0.983050847 1.763427994 0.033898305 0.208333333 0.355932203 48 1 0 58 X:16436808-16436927 8 hang FBtr0343571|FBtr0290069|FBtr0074276 16436811|16436811|16436732 16438454|16438454|16438454 CAATGCAA 8mer-A1 dme-miR-33-5p X + 16436801 16436926 stop_codon hang FlyBase G46930.1 GCGACAAATTGAGTGATCATACTCCAACTACAACTCCAACTACCACTACCACTACCAACCACAACTACCAACCACACCTCATCATCTCAATGCAAAATCACTTGAAATGTACAAAGCCAATCCAAT 23 16436908 0.810966884 10 22 96 0.970588235 1.217483944 0 0.347826087 0.558823529 23 0 1 33 X:16436801-16436926 8 14 959 FBgn0026575 3688.81 55.80333333 85.77333333 0.003795262 0.25088107 0.163220892 -20 -20 -20 0.5 dme-miR-283-5p 8mer-m1 TGATATTT X 16452125 16452132 + X_16452125_16452132_+ 0.523186897 0.444178682 0.48368279 0.055867234 Rbp2 FBtr0343633|FBtr0074280|FBtr0343632|FBtr0074281|FBtr0074279 16452084|16452084|16452084|16452084|16452084 16453615|16454972|16453615|16453615|16454972 X + 16452096 16452172 3'utr Rbp2 FlyBase G62168.1 TTGGTCCGCAATACAATATATGCCTGATATGATATTTTGATGTGCGAGAACGAGATAATCCGAGATAGAGGGAGAGA 41 16452152 0.870226809 13 36 258 0.882352941 1.653212514 0.509803922 0.146341463 0.31372549 41 6 0 45 X:16452096-16452172 8 Rbp2 FBtr0074279|FBtr0343633|FBtr0074280|FBtr0343632|FBtr0074281 16452084|16452084|16452084|16452084|16452084 16454972|16453615|16454972|16453615|16453615 TGATATTT 8mer-m1 dme-miR-283-5p X + 16452105 16452171 3'utr Rbp2 FlyBase G46949.1 AATACAATATATGCCTGATATGATATTTTGATGTGCGAGAACGAGATAATCCGAGATAGAGGGAGAG 20 16452114 0.818703012 7 16 129 0.806451613 0.920818754 0.709677419 0.45 0.64516129 20 4 2 25 X:16452105-16452171 8 17.5 960 FBgn0262734 5061.32 184.5666667 285.3533333 0.003457596 0.094816688 0.061327477 -27 11 -8 0.5 dme-bantam-3p 7mer-A1 GATCTCA X 1649339 1649345 + X_1649339_1649345_+ 0.582269915 0.585246164 0.583758039 0.002104562 br FBtr0070261|FBtr0330406|FBtr0300427|FBtr0300428|FBtr0332293|FBtr0070263 1648712|1649105|1648712|1648712|1648712|1648712 1649378|1649378|1649378|1649378|1649378|1649378 X + 1649280 1649357 3'utr br FlyBase G58005.1 GAAAAAGGAGCAGAGGGAGATTAGGACTATACTACTACCACGTAGACATTTCAATTTCGGATCTCACAGAACGGAAAA 40 1649335 0.974229974 7 39 240 1 1.653212514 0.4 0.125 0.222222222 40 0 0 45 X:1649280-1649357 7 br FBtr0300427|FBtr0070261|FBtr0330406|FBtr0070263|FBtr0300428|FBtr0332293 1648712|1648712|1649105|1648712|1648712|1648712 1649378|1649378|1649378|1649378|1649378|1649378 GATCTCA 7mer-A1 dme-bantam-3p X + 1649282 1649362 3'utr br FlyBase G43884.1 AAAAGGAGCAGAGGGAGATTAGGACTATACTACTACCACGTAGACATTTCAATTTCGGATCTCACAGAACGGAAAATTCAA 33 1649335 0.982257346 8 29 214 0.895833333 1.633468456 0.3125 0.333333333 0.541666667 33 5 0 43 X:1649282-1649362 7 25.5 961 FBgn0000210 1688.696667 27.97 43.00333333 0.015100403 0.911691098 0.592977289 4 4 4 0.5 dme-miR-980-3p 7mer-m8 GGCAGCT X 16614135 16614141 + X_16614135_16614141_+ 0.642615906 0.638076161 0.640346033 0.003210053 mbt FBtr0074285 16614013 16614856 X + 16613967 16614180 stop_codon mbt FlyBase G62229.1 CCGTCGCTGCTGGTTCCGCTGATGCGCAATGCGCGACACCATCCGTAGTTGGATGCCACTGGACAACCCAGACGATCCGGCTGCTCGATGAAAGCAATCATTCCCACAGACAACGGATCCCGGCCCGTGGGCATCCATCTATTAAATTCTAGTATTAACATTCAGTTTGGCAGCTGTACTTAAATCCCCGGAGAATCCTCGAAACGTTGTAAAG 633 16614133 0.953262788 26 615 5004 0.970914127 2.146748014 0.159279778 0.129541864 0.236842105 633 17 4 701 X:16613967-16614180 7 mbt FBtr0074285 16614013 16614856 GGCAGCT 7mer-m8 dme-miR-980-3p X + 16614110 16614168 3'utr mbt FlyBase G46987.1 AAATTCTAGTATTAACATTCAGTTTGGCAGCTGTACTTAAATCCCCGGAGAATCCTCGA 455 16614133 0.737649622 10 444 3565 0.979885057 2.231724383 0.139367816 0.384615385 0.597701149 455 11 3 682 X:16614110-16614168 7 529 962 FBgn0025743 524.9733333 19.44666667 29.74666667 1.007670231 27.20260542 17.78350515 2 2 2 0.5 dme-miR-33-5p 7mer-m8 CAATGCA X 16649151 16649157 + X_16649151_16649157_+ 0.52043952 0.463127502 0.491783511 0.040525704 mthl1 FBtr0074314|FBtr0340150 16643506|16643506 16649697|16650309 X + 16649119 16649168 3'utr mthl1 FlyBase G62241.1 ATGTATTTTAGCTCTTGAAAACGCAGAAACTACAATGCAGTACAATTATT 10 16649155 0.964380718 4 9 49 0.923076923 1.079181246 0 0.2 0.384615385 10 1 0 12 X:16649119-16649168 7 mthl1 FBtr0340150|FBtr0074314 16643506|16643506 16650309|16649697 CAATGCA 7mer-m8 dme-miR-33-5p X + 16649082 16649182 3'utr mthl1 FlyBase G46998.1 GAGATGTATTCCCCCTCCCAATTACAAACGTATTTTTATGTATTTTAGCTCTTGAAAACGCAGAAACTACAATGCAGTACAATTATTATTTCTCATAAGAT 15 16649154 0.972312921 7 15 95 1 1.447158031 0 0.266666667 0.607142857 15 0 0 28 X:16649082-16649182 7 10 963 FBgn0030766 372.0033333 8.846666667 13.59666667 0.02688148 1.130369254 0.735474381 -4 -3 -3.5 0.5 dme-miR-8-3p 8mer-A1 CAGTATTA X 1674224 1674231 - X_1674224_1674231_- 0.591215778 0.604057483 0.597636631 0.009080453 CG32809 FBtr0308321|FBtr0333117|FBtr0333120|FBtr0333118|FBtr0308323|FBtr0333119|FBtr0308324 1673336|1673108|1673336|1673336|1673336|1673336|1673336 1675880|1675880|1675880|1677054|1675880|1675880|1677238 X - 1674202 1674267 3'utr CG32809 FlyBase G64043.1 ATTTGTTAACCTTACTGCCCGGCCAGTATTAGACTTCAGTATTATAGGCTAATTTACATTTAAATA 41 1674232 0.884651353 10 37 364 0.93877551 1.662757832 0.142857143 0.146341463 0.285714286 41 3 0 46 X:1674202-1674267 8 CG32809 FBtr0333120|FBtr0333117|FBtr0308321|FBtr0308324|FBtr0333119|FBtr0308323|FBtr0333118 1673336|1673108|1673336|1673336|1673336|1673336|1673336 1675880|1675880|1675880|1677238|1675880|1675880|1677054 CAGTATTA 8mer-A1 dme-miR-8-3p X - 1674179 1674282 3'utr CG32809 FlyBase G48272.1 CGTGCACACACATAGATTTGTTAACCTTACTGCCCGGCCAGTATTAGACTTCAGTATTATAGGCTAATTTACATTTAAATAAACTTGTAACACACGACTTGAGA 28 1674232 0.990554333 13 23 235 0.863636364 1.278753601 0.25 0.392857143 0.613636364 28 5 1 38 X:1674179-1674282 8 25 964 FBgn0023531 281.8933333 6.233333333 9.576666667 0.088686028 4.010695187 2.61051166 1 1 1 0.5 dme-miR-277-3p 7mer-m8 TGCATTT X 16955511 16955517 + X_16955511_16955517_+ 0.595069939 0.479805346 0.537437643 0.08150438 RhoGAP15B FBtr0110990|FBtr0290096 16955463|16955463 16955995|16956234 X + 16955459 16955572 stop_codon RhoGAP15B FlyBase G62359.1 AAGTAGAAGTGCCCTCTCCCAGCTGCCAAACATAGATTTAACCGCCGTCTTGTGCATTTTTCTGTAGATATTCTGAATTTATTCGCAATATTAGGGAATATATACGTTTAGCAA 51 16955508 0.901497505 19 49 495 0.952380952 1.77815125 0.238095238 0.176470588 0.333333333 51 3 0 60 X:16955459-16955572 7 RhoGAP15B FBtr0290096|FBtr0110990 16955463|16955463 16956234|16955995 TGCATTT 7mer-m8 dme-miR-277-3p X + 16955464 16955600 3'utr RhoGAP15B FlyBase G47072.1 GAAGTGCCCTCTCCCAGCTGCCAAACATAGATTTAACCGCCGTCTTGTGCATTTTTCTGTAGATATTCTGAATTTATTCGCAATATTAGGGAATATATACGTTTAGCAATATTTTTACGAACAATTTCGGGAATTTT 36 16955508 0.989428055 14 32 353 0.927272727 1.40654018 0.145454545 0.416666667 0.618181818 36 3 1 51 X:16955464-16955600 7 31.5 965 FBgn0030808 1485.72 31.16 47.79666667 0.021201842 1.010911425 0.659041774 3 3 3 0.5 dme-miR-190-5p 8mer-m1 ACATATCT X 16955758 16955765 + X_16955758_16955765_+ 0.533545124 0.512498381 0.523021753 0.014882264 RhoGAP15B FBtr0110990|FBtr0290096 16955463|16955463 16955995|16956234 X + 16955720 16955770 3'utr RhoGAP15B FlyBase G62361.1 AGTATATGCCCTTTGTCTTCAACATAGCTCGATATCTGACATATCTAGTGT 15 16955745 0.986126358 6 9 116 0.666666667 0.77815125 0.222222222 0.133333333 0.277777778 15 5 1 12 X:16955720-16955770 8 RhoGAP15B FBtr0290096|FBtr0110990 16955463|16955463 16956234|16955995 ACATATCT 8mer-m1 dme-miR-190-5p X + 16955713 16955779 3'utr RhoGAP15B FlyBase G47074.1 ATATCTAAGTATATGCCCTTTGTCTTCAACATAGCTCGATATCTGACATATCTAGTGTTTATCTACA 18 16955732 0.984737045 8 10 136 0.615384615 0.602059991 0.230769231 0.333333333 0.538461538 18 7 3 16 X:16955713-16955779 8 8 966 FBgn0030808 1485.72 31.16 47.79666667 0.005384595 0.256739409 0.167375689 13 26 19.5 0.5 dme-miR-14-3p 7mer-m8 AAGACTG X 17079812 17079818 + X_17079812_17079818_+ 0.566052659 0.569346341 0.5676995 0.002328927 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 X + 17079767 17079843 3'utr CG4949 FlyBase G62366.1 AAAGCTGGAACGAATTTTCCAATCTCGAACGAATTTCGAGTTATTAAGACTGCATTTCCATTTTATTGACTTAAAGC 46 17079810 0.875800685 12 43 407 0.951612903 1.770852012 0.016129032 0.260869565 0.451612903 46 3 0 59 X:17079767-17079843 7 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 AAGACTG 7mer-m8 dme-miR-14-3p X + 17079797 17079844 3'utr CG4949 FlyBase G47078.1 GAATTTCGAGTTATTAAGACTGCATTTCCATTTTATTGACTTAAAGCT 22 17079810 0.988156665 7 21 191 0.931034483 0.954242509 0 0.318181818 0.482758621 22 0 2 27 X:17079797-17079844 7 29.5 967 FBgn0030813 105.3333333 6.336666667 9.69 0.280063291 4.655444503 3.044375645 2 2 2 0.5 dme-bantam-3p 8mer-A1 TGATCTCA X 17080449 17080456 + X_17080449_17080456_+ 0.565234204 0.564402425 0.564818314 0.000588171 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 X + 17080394 17080470 3'utr CG4949 FlyBase G62369.1 GATTGGAATCCGATCTCCGCATCCCAGCCTCATATGTAGTCCAGCATGCCGCTTATGATCTCAAAGGCATCCCGAGC 30 17080449 0.974939437 6 30 186 1 1.51851394 0.696969697 0.1 0.181818182 30 0 0 33 X:17080394-17080470 8 CG4949 FBtr0343333|FBtr0074381 17079585|17079585 17081237|17080907 TGATCTCA 8mer-A1 dme-bantam-3p X + 17080429 17080460 3'utr CG4949 FlyBase G47081.1 GTAGTCCAGCATGCCGCTTATGATCTCAAAGG 10 17080448 0.689326875 3 9 61 0.9 1.255272505 0.7 0.7 0.85 10 2 0 18 X:17080429-17080460 8 19 968 FBgn0030813 105.3333333 6.336666667 9.69 0.180379747 2.998421883 1.960784314 0 1 0.5 0.5 dme-miR-317-5p 6mer2-7 TATCCC X 17150398 17150403 + X_17150398_17150403_+ 0.924881149 0.588240698 0.756560924 0.23804071 CG5010 FBtr0343291|FBtr0074387 17150298|17150298 17150647|17150647 X + 17150277 17150526 stop_codon CG5010 FlyBase G62399.1 AGCAGAGCCACCATCTCCAGTAGAGGGCCCAGCTCCGGTAGAATATCATCTGGCCAAGCACCGGCGGATGAACGCAGCCGGATGAACCCATCGGATGAACACCTCCGGATGAACTCTGTCCTATCCCTTCGTTTAGTTCTTAATTGTTTAATTGCAAGCATCTGAAAGAAAGCATTGTTTAATTGTAGTGCAAAATGAAATGTTAAATAGAAAATCCCGTTGGCAGCCCAAAACCCTTTCCAAAAAAAAA 111 17150398 0.999986539 32 107 651 0.965034965 2.139879086 0.251748252 0.198198198 0.377622378 111 5 0 138 X:17150277-17150526 6 CG5010 FBtr0343291|FBtr0074387 17150298|17150298 17150647|17150647 TATCCC 6mer2-7 dme-miR-317-5p X + 17150352 17150423 3'utr CG5010 FlyBase G47099.1 AGCCGGATGAACCCATCGGATGAACACCTCCGGATGAACTCTGTCCTATCCCTTCGTTTAGTTCTTAATTGT 34 17150398 0.982637935 11 31 228 0.928571429 1.716003344 0.035714286 0.382352941 0.625 34 4 0 52 X:17150352-17150423 6 32.5 969 FBgn0260747 667.7266667 81.68 125.22 0.048672611 0.397894221 0.259543204 0 0 0 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 17241577 17241583 - X_17241577_17241583_- 0.639209656 0.707690428 0.673450042 0.048423167 CG8915 FBtr0339780|FBtr0339780|FBtr0339780|FBtr0074447|FBtr0074447|FBtr0074447 17240466|17240466|17240466|17241265|17241265|17241265 17241817|17241817|17241817|17241817|17241817|17241817 X - 17241563 17241657 3'utr CG8915 FlyBase G68397.1 TCCACTGCACTTCTTACATATTAAGGTATATCTAAGGTAGCACACACGATATCTTAACTATATTCCTTACATGTTGTGATACAAGAAGGCGCAAA 84 17241584 0.95910057 9 77 554 0.907407407 1.146128036 0.018518519 0.238095238 0.407407407 84 4 6 98 X:17241563-17241657 7 CG8915 FBtr0339780|FBtr0339780|FBtr0339780|FBtr0074447|FBtr0074447|FBtr0074447 17240466|17240466|17240466|17241265|17241265|17241265 17241817|17241817|17241817|17241817|17241817|17241817 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 17241565 17241623 3'utr CG8915 FlyBase G51462.1 AGGTAGCACACACGATATCTTAACTATATTCCTTACATGTTGTGATACAAGAAGGCGCA 54 17241585 0.981921612 9 48 364 0.87654321 0.897015839 0 0.388888889 0.592592593 54 2 8 71 X:17241565-17241623 7 64 970 FBgn0030833 168.33 5.216666667 8 0.380205549 12.26837061 8 1 2 1.5 0.5 dme-miR-252-5p 8mer-m1 GTACTTAG X 17821339 17821346 - X_17821339_17821346_- 0.568004309 0.578947364 0.573475837 0.00773794 Socs16D FBtr0310310|FBtr0074473 17820762|17820773 17822326|17822326 X - 17821279 17821382 3'utr Socs16D FlyBase G68544.1 AAAGCGAGCGAATTATGATATAACCATTAACGCATTGTACTTAGTTTAATCCATGTCATGTACACAAATGATCGATTGCCAGATGGAAAGAATGGCGAACACAC 43 17821347 0.982730105 8 42 317 0.982142857 1.740362689 0.053571429 0.279069767 0.446428571 43 1 0 55 X:17821279-17821382 8 Socs16D FBtr0074473|FBtr0310310 17820773|17820762 17822326|17822326 GTACTTAG 8mer-m1 dme-miR-252-5p X - 17821282 17821408 3'utr Socs16D FlyBase G51559.1 GCAACGCCCGTGCCCAAAGGTCCTTGAAAGCGAGCGAATTATGATATAACCATTAACGCATTGTACTTAGTTTAATCCATGTCATGTACACAAATGATCGATTGCCAGATGGAAAGAATGGCGAACA 33 17821347 0.975830784 10 33 208 1 1.73239376 0.092592593 0.454545455 0.666666667 33 0 0 54 X:17821282-17821408 8 17.5 971 FBgn0030869 790.3733333 19.79 30.42 0.022141435 0.884284992 0.575279421 1 1 1 0.5 dme-miR-1008-3p 8mer-A1 AGCTGTGA X 17821556 17821563 - X_17821556_17821563_- 0.638270905 0.6374538 0.637862352 0.000577777 Socs16D FBtr0310310|FBtr0074473 17820762|17820773 17822326|17822326 X - 17821513 17821582 3'utr Socs16D FlyBase G68545.1 ACTTTTATGCTTGCCTTTTAGCTGTGATTTAAATAAGTCGTCGAATGTTAATTGGAAGACGATGTGCAGT 61 17821565 0.992139498 12 56 632 0.931506849 1.531478917 0.178082192 0.163934426 0.301369863 61 4 1 68 X:17821513-17821582 8 Socs16D FBtr0074473|FBtr0310310 17820773|17820762 17822326|17822326 AGCTGTGA 8mer-A1 dme-miR-1008-3p X - 17821535 17821576 3'utr Socs16D FlyBase G51560.1 ATGCTTGCCTTTTAGCTGTGATTTAAATAAGTCGTCGAATGT 52 17821554 0.62935682 11 48 531 0.933333333 1.62324929 0.244444444 0.538461538 0.733333333 52 5 1 84 X:17821535-17821576 8 54 972 FBgn0030869 790.3733333 19.79 30.42 0.068322143 2.728650834 1.775147929 2 -9 -3.5 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA X 1785854 1785861 + X_1785854_1785861_+ 0.484587304 0.643961956 0.56427463 0.112694931 Adar FBtr0305499|FBtr0305499|FBtr0305499|FBtr0339272|FBtr0339272|FBtr0339272|FBtr0070300|FBtr0070300|FBtr0070300 1783753|1783753|1783753|1783753|1783753|1783753|1783753|1783753|1783753 1788065|1788065|1788065|1788065|1788065|1788065|1788065|1788065|1788065 X + 1785822 1785857 3'utr Adar FlyBase G58051.1 TGGATAAACCAAAGTTGATCTTATATAAAATACTGT 17 1785836 0.875302419 4 14 114 0.894736842 0.753327667 0.052631579 0.117647059 0.210526316 17 0 2 17 X:1785822-1785857 4 Adar FBtr0070300|FBtr0070300|FBtr0070300|FBtr0305499|FBtr0305499|FBtr0305499|FBtr0339272|FBtr0339272|FBtr0339272 1783753|1783753|1783753|1783753|1783753|1783753|1783753|1783753|1783753 1788065|1788065|1788065|1788065|1788065|1788065|1788065|1788065|1788065 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X + 1785822 1785870 3'utr Adar FlyBase G43913.1 TGGATAAACCAAAGTTGATCTTATATAAAATACTGTGATACTAAATTTT 16 1785837 0.840277577 6 12 113 0.695652174 0.903089987 0 0.375 0.565217391 16 6 1 16 X:1785822-1785870 8 9 973 FBgn0026086 1030.723333 39.3 60.36 0.008731732 0.229007634 0.149105368 18 17 17.5 0.5 dme-miR-305-5p 7mer-m1 GTACAAT X 17858578 17858584 - X_17858578_17858584_- 0.747454825 0.552250343 0.649852584 0.138030426 Arp8 FBtr0074544 17858377 17858769 X - 17858540 17858602 3'utr Arp8 FlyBase G68565.1 ACAAATTTATACAAGATTGTACAATTATTTTATTTTTAAAGACACCTAACAAATATGCAGAAT 7 17858579 0.99459099 6 6 63 0.777777778 0.84509804 0.111111111 0.285714286 0.444444444 7 2 0 7 X:17858540-17858602 7 Arp8 FBtr0074544 17858377 17858769 GTACAAT 7mer-m1 dme-miR-305-5p X - 17858573 17858643 3'utr Arp8 FlyBase G51575.1 AGCATTACCCTGGAGGAAGGAAACACTCCGGATGGGGTCATACAAATTTATACAAGATTGTACAATTATTT 11 17858584 0.87856763 7 11 55 1 1.146128036 0 0.181818182 0.357142857 11 0 0 14 X:17858573-17858643 7 4.5 974 FBgn0030877 203.0033333 10.82333333 16.55 0.022167124 0.415768402 0.271903323 -5 0 -2.5 0.5 dme-bantam-3p 7mer-A1 GATCTCA X 17924507 17924513 - X_17924507_17924513_- 0.709597854 0.694978968 0.702288411 0.010337123 Sh FBtr0089658 17924305 17930123 X - 17924496 17924534 3'utr Sh FlyBase G68596.1 AAATTGAAACCAACCAAATTGGATCTCAAATCAAAGCAG 54 17924515 0.777553198 3 50 223 0.9375 1.477121255 0.046875 0.148148148 0.28125 54 3 1 60 X:17924496-17924534 7 Sh FBtr0089658 17924305 17930123 GATCTCA 7mer-A1 dme-bantam-3p X - 17924495 17924530 3'utr Sh FlyBase G51593.1 TGAAACCAACCAAATTGGATCTCAAATCAAAGCAGC 34 17924515 0.934119463 2 31 135 0.921568627 1.371067862 0.039215686 0.411764706 0.607843137 34 3 1 47 X:17924495-17924530 7 44 975 FBgn0003380 28.61666667 0.493333333 0.783333333 1.537565521 89.18918919 56.17021277 2 2 2 0.5 dme-miR-317-3p 7mer-m8 TGTGTTC X 18078953 18078959 - X_18078953_18078959_- 0.39892559 0.520012876 0.459469233 0.085621651 CG7536 FBtr0343317|FBtr0343318|FBtr0074530 18078489|18078861|18078861 18079653|18079653|18079653 X - 18078916 18079015 3'utr CG7536 FlyBase G68597.1 AACTAGAGCTGATCCCGAACGGAATTGTACATAGTATACGTATGCTAGTGCCTGTGTGTGTTCTTTTCGCTCTGCGTGTGTGTGTGTGTGTGTGAGTGTG 28 18078952 0.991302797 8 26 277 0.96969697 1.505149978 0.212121212 0.142857143 0.272727273 28 1 0 32 X:18078916-18079015 7 CG7536 FBtr0074530|FBtr0343317|FBtr0343318 18078861|18078489|18078861 18079653|18079653|18079653 TGTGTTC 7mer-m8 dme-miR-317-3p X - 18078916 18079031 5'utr-coding CG7536 FlyBase G51596.1 AAGTTTAAAGAACTTAAACTAGAGCTGATCCCGAACGGAATTGTACATAGTATACGTATGCTAGTGCCTGTGTGTGTTCTTTTCGCTCTGCGTGTGTGTGTGTGTGTGTGAGTGTG 20 18078952 0.984385208 14 20 176 1 1.431363764 0.185185185 0.25 0.444444444 20 0 0 27 X:18078916-18079031 7 16 976 FBgn0030890 573.73 20 30.81333333 0.027887682 0.8 0.519255733 -7 -7 -7 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 18079078 18079083 - X_18079078_18079083_- 0.509527015 0.447624809 0.478575912 0.043771465 CG7536 FBtr0343317|FBtr0343317|FBtr0343317|FBtr0343318|FBtr0343318|FBtr0343318|FBtr0074531|FBtr0074531|FBtr0074531|FBtr0074530|FBtr0074530|FBtr0074530 18078489|18078489|18078489|18078861|18078861|18078861|18079015|18079015|18079015|18078861|18078861|18078861 18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653 X - 18079056 18079115 5'utr CG7536 FlyBase G68598.1 CTGTCCACCTGTTGATTGATATACGACATAGACTGTGACCAAATCGAAACTTAAACTAAA 147 18079086 0.781455878 12 122 714 0.971428571 1.929418926 0.297142857 0.143835616 0.285714286 146 4 1 170 X:18079056-18079115 6 CG7536 FBtr0074531|FBtr0074531|FBtr0074531|FBtr0074530|FBtr0074530|FBtr0074530|FBtr0343317|FBtr0343317|FBtr0343317|FBtr0343318|FBtr0343318|FBtr0343318 18079015|18079015|18079015|18078861|18078861|18078861|18078489|18078489|18078489|18078861|18078861|18078861 18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653|18079653 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X - 18079060 18079140 5'utr CG7536 FlyBase G51597.1 TAGATCTGCCTTATCTGTTATCTGTCTGTCCACCTGTTGATTGATATACGACATAGACTGTGACCAAATCGAAACTTAAAC 101 18079081 0.750316737 14 97 571 0.99378882 1.903089987 0.298136646 0.356435644 0.596273292 101 0 1 160 X:18079060-18079140 6 101 977 FBgn0030890 573.73 20 30.81333333 0.176040995 5.05 3.277801817 3 -2 0.5 0.5 dme-miR-252-5p 8mer-m1 GTACTTAG X 18079247 18079254 - X_18079247_18079254_- 0.614171992 0.433981708 0.52407685 0.127413783 CG7536 FBtr0343317|FBtr0343318|FBtr0074531|FBtr0074530 18078489|18078861|18079015|18078861 18079653|18079653|18079653|18079653 X - 18079236 18079299 5'utr CG7536 FlyBase G68600.1 AATCCATACCTTCCACAGAAATTGGAGTAGAGAACGGCAGTATTAGTACTTAGAAAAGGCGAAC 10 18079252 0.967788521 5 10 52 1 1.041392685 0.181818182 0.1 0.181818182 10 0 0 11 X:18079236-18079299 8 CG7536 FBtr0074531|FBtr0074530|FBtr0343317|FBtr0343318 18079015|18078861|18078489|18078861 18079653|18079653|18079653|18079653 GTACTTAG 8mer-m1 dme-miR-252-5p X - 18079245 18079300 5'utr CG7536 FlyBase G51598.1 TAATCCATACCTTCCACAGAAATTGGAGTAGAGAACGGCAGTATTAGTACTTAGAA 6 18079257 0.952381365 3 6 25 1 1 0 0.5 0.7 6 0 0 10 X:18079245-18079300 8 5.5 978 FBgn0030890 573.73 20 30.81333333 0.009586391 0.275 0.178494158 -2 3 0.5 0.5 dme-miR-34-5p 7mer-A1 ACTGCCA X 18088759 18088765 - X_18088759_18088765_- 0.757445195 0.796007641 0.776726418 0.027267735 CG7206 FBtr0089576|FBtr0308352 18088723|18088723 18089007|18089869 X - 18088733 18088826 3'utr CG7206 FlyBase G68622.1 GGCCACTGACGACGTGTTCACCCAAGACTAAAAACTTGCACATATTAGAAGATCAGATTTGACTGCCATTTGCTACGTATAATAAAGTTTGTTT 73 18088768 0.98128655 14 69 502 0.93902439 1.886490725 0.195121951 0.109589041 0.207317073 73 5 0 77 X:18088733-18088826 7 CG7206 FBtr0089576|FBtr0308352 18088723|18088723 18089007|18089869 ACTGCCA 7mer-A1 dme-miR-34-5p X - 18088749 18088826 3'utr CG7206 FlyBase G51613.1 GGCCACTGACGACGTGTTCACCCAAGACTAAAAACTTGCACATATTAGAAGATCAGATTTGACTGCCATTTGCTACGT 55 18088768 0.978579715 12 52 368 0.946808511 1.171238756 0.287234043 0.454545455 0.680851064 55 0 5 89 X:18088749-18088826 7 53 979 FBgn0030892 243 18.00333333 27.36 0.218106996 2.943899278 1.937134503 3 3 3 0.5 dme-miR-308-3p 8mer-m1 CTGTGATT X 18240797 18240804 - X_18240797_18240804_- 0.338309018 0.382703337 0.360506177 0.031391511 upd2 FBtr0300182 18240652 18241347 X - 18240784 18240818 3'utr upd2 FlyBase G68658.1 AATGCTTAAATCTACTGTGATTTATTTTAAGTACT 24 18240797 0.713651948 3 23 254 0.965517241 1.447158031 0.310344828 0.166666667 0.310344828 24 1 0 28 X:18240784-18240818 8 upd2 FBtr0300182 18240652 18241347 CTGTGATT 8mer-m1 dme-miR-308-3p X - 18240786 18240816 3'utr upd2 FlyBase G51649.1 TGCTTAAATCTACTGTGATTTATTTTAAGTA 9 18240797 0.655473911 3 9 99 1 1 0.3 0.111111111 0.2 9 0 0 10 X:18240786-18240816 8 16.5 980 FBgn0030904 6 0.38 0.586666667 2.75 43.42105263 28.125 -7 -7 -7 0.5 dme-miR-8-3p 8mer-A1 CAGTATTA X 18241279 18241286 - X_18241279_18241286_- 0.637447745 0.568508529 0.602978137 0.048747376 upd2 FBtr0300182 18240652 18241347 X - 18241267 18241311 3'utr upd2 FlyBase G68661.1 CAGCCGGGTCAACATCACGCCCTTCCAGTATTATAGCGAGTACTT 13 18241288 0.774020328 4 11 83 0.866666667 0.812913357 0 0.153846154 0.266666667 13 1 1 13 X:18241267-18241311 8 upd2 FBtr0300182 18240652 18241347 CAGTATTA 8mer-A1 dme-miR-8-3p X - 18241273 18241301 3'utr upd2 FlyBase G51651.1 AACATCACGCCCTTCCAGTATTATAGCGA 6 18241288 0.838403907 2 5 32 0.888888889 0.903089987 0 0.333333333 0.555555556 6 1 0 8 X:18241273-18241301 8 9.5 981 FBgn0030904 6 0.38 0.586666667 1.583333333 25 16.19318182 2 2 2 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA X 18284395 18284402 + X_18284395_18284402_+ 0.591641436 0.500885252 0.546263344 0.064174254 upd3 FBtr0113465|FBtr0113465|FBtr0113465 18283950|18283950|18283950 18284596|18284596|18284596 X + 18284359 18284417 3'utr upd3 FlyBase G62630.1 AAGTATACTAGATATACTTTGCCTTGTATTACGATGCTGTGATAGTAGATGATTAAAGT 34 18284393 0.766648922 8 27 289 0.8 1.028028724 0.55 0.176470588 0.3 34 6 2 32 X:18284359-18284417 8 upd3 FBtr0113465|FBtr0113465|FBtr0113465 18283950|18283950|18283950 18284596|18284596|18284596 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X + 18284368 18284419 3'utr upd3 FlyBase G47255.1 AGATATACTTTGCCTTGTATTACGATGCTGTGATAGTAGATGATTAAAGTAA 30 18284393 0.839112212 7 29 274 0.978723404 1.662757832 0.340425532 0.366666667 0.595744681 30 1 0 46 X:18284368-18284419 8 30 982 FBgn0053542 45.60666667 2.493333333 3.816666667 0.657798567 12.03208556 7.860262009 2 2 2 0.5 dme-bantam-3p 7mer-A1 GATCTCA X 1862231 1862237 - X_1862231_1862237_- 0.78691061 0.782679106 0.784794858 0.002992122 CG14814 FBtr0070369|FBtr0070370|FBtr0339494 1862133|1862133|1862007 1862327|1862327|1862327 X - 1862212 1862272 3'utr CG14814 FlyBase G64071.1 TGGTATATCATAGACAATTTGAAAAACTTAACTGAGATCTCAGTTCGTGCGAAGTAGTAGA 12 1862240 0.973021708 4 12 80 1 1.146128036 0.142857143 0.166666667 0.285714286 12 0 0 14 X:1862212-1862272 7 CG14814 FBtr0339494|FBtr0070370|FBtr0070369 1862007|1862133|1862133 1862327|1862327|1862327 GATCTCA 7mer-A1 dme-bantam-3p X - 1862222 1862253 3'utr CG14814 FlyBase G48303.1 TGAAAAACTTAACTGAGATCTCAGTTCGTGCG 5 1862240 0.706221503 2 5 32 1 0.77815125 0 0.2 0.333333333 5 0 0 6 X:1862222-1862253 7 7 983 FBgn0023515 470.3333333 16.16 24.75 0.014883062 0.433168317 0.282828283 3 3 3 0.5 "dme-miR-1002-5p,dme-miR-252-5p" 6mer2-7 TACTTA X 18635679 18635684 - X_18635679_18635684_- 0.979913924 0.961917328 0.970915626 0.012725518 Rip11 FBtr0343020|FBtr0343020|FBtr0343021|FBtr0343021|FBtr0301545|FBtr0301545|FBtr0343019|FBtr0343019|FBtr0074616|FBtr0074616 18635640|18635640|18635640|18635640|18635640|18635640|18635640|18635640|18635640|18635640 18636833|18636833|18636312|18636312|18636312|18636312|18636833|18636833|18637354|18637354 X - 18635667 18635717 3'utr Rip11 FlyBase G68744.1 CACAGTTGAAATATGTTGATACTACAATGATTTTACTTATTGATATAAACG 20 18635689 0.745427231 11 17 180 0.863636364 1.278753601 0.318181818 0.1 0.181818182 20 3 0 19 X:18635667-18635717 6 Rip11 FBtr0074616|FBtr0074616|FBtr0343019|FBtr0343019|FBtr0301545|FBtr0301545|FBtr0343021|FBtr0343021|FBtr0343020|FBtr0343020 18635640|18635640|18635640|18635640|18635640|18635640|18635640|18635640|18635640|18635640 18637354|18637354|18636833|18636833|18636312|18636312|18636312|18636312|18636833|18636833 TACTTA 6mer2-7 "dme-miR-1002-5p,dme-miR-252-5p" X - 18635660 18635720 3'utr Rip11 FlyBase G51709.1 ACACACAGTTGAAATATGTTGATACTACAATGATTTTACTTATTGATATAAACGCAAGCAA 12 18635690 0.978335919 7 12 99 1 1.278753601 0 0.5 0.684210526 12 0 0 19 X:18635660-18635720 6 8.5 984 FBgn0027335 6668.076667 280.47 431.2966667 0.00127473 0.030306272 0.019708012 5 6 5.5 0.5 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 18781249 18781254 + X_18781249_18781254_+ 0.990235841 0.986041122 0.988138481 0.002966101 CG6891 FBtr0074631|FBtr0334453|FBtr0074632 18781193|18781193|18781193 18781345|18781345|18781345 X + 18781229 18781320 3'utr CG6891 FlyBase G62699.1 TTTGCAACTCTTAACTGCTTACCAAACTGCTCCTTTCTCTTTAATTATTATGAATTAATTTTATGAAATTTAAAAACTGTACATTTTATGAA 47 18781263 0.788561177 13 40 418 0.859649123 1.088136089 0.087719298 0.14893617 0.298245614 47 5 3 49 X:18781229-18781320 6 CG6891 FBtr0334453|FBtr0074632|FBtr0074631 18781193|18781193|18781193 18781345|18781345|18781345 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 18781239 18781283 3'utr CG6891 FlyBase G47310.1 TTAACTGCTTACCAAACTGCTCCTTTCTCTTTAATTATTATGAAT 33 18781257 0.721924709 8 32 306 0.977272727 1.33243846 0.022727273 0.272727273 0.454545455 33 0 1 43 X:18781239-18781283 6 34.5 985 FBgn0030955 851.42 106.5933333 161.8266667 0.040520542 0.323660016 0.213191069 -14 -8 -11 0.5 dme-miR-252-5p 6mer3-8 GTACTT X 18793314 18793319 + X_18793314_18793319_+ 0.571060904 0.645187768 0.608124336 0.052415634 Atg101 FBtr0074635 18792553 18793517 X + 18793253 18793405 3'utr Atg101 FlyBase G62716.1 TGTTTAGATCGAGGCAAGTAGCGGTGAGGCGGTAGAAATGTATGTATAAAAGATTGTGATTGTACTTGTAGTGATTAAACTATAGTACGGACTCCATGTATCCATGGATATCCAATATGTAGACATGTATGTATGTAAATCAATGTTTATCTA 428 18793313 0.99077693 22 402 4174 0.941176471 1.490426721 0.348884381 0.140186916 0.253549696 428 15 14 464 X:18793253-18793405 6 Atg101 FBtr0074635 18792553 18793517 GTACTT 6mer3-8 dme-miR-252-5p X + 18793255 18793389 3'utr Atg101 FlyBase G47323.1 TTTAGATCGAGGCAAGTAGCGGTGAGGCGGTAGAAATGTATGTATAAAAGATTGTGATTGTACTTGTAGTGATTAAACTATAGTACGGACTCCATGTATCCATGGATATCCAATATGTAGACATGTATGTATGTA 347 18793313 0.990353791 18 328 3332 0.940740741 1.927712462 0.368518519 0.409221902 0.62037037 347 27 5 508 X:18793255-18793389 6 372.5 986 FBgn0030960 179.3333333 11.9 18.35333333 2.077137546 31.30252101 20.29604068 1 1 1 0.5 dme-miR-14-3p 7mer-A1 AGACTGA X 18879407 18879413 + X_18879407_18879413_+ 0.474181822 0.582840061 0.528510941 0.076833021 CG34401 FBtr0112653|FBtr0333160 18878120|18878120 18880636|18884075 X + 18879390 18879431 3'utr CG34401 FlyBase G62782.1 GTGCGTGTGAGCATTTTAGACTGAGATATCTGCCAACAACAA 81 18879405 0.674951499 9 81 560 1 1.973127854 0.021276596 0.160493827 0.276595745 81 0 0 94 X:18879390-18879431 7 CG34401 FBtr0333160|FBtr0112653 18878120|18878120 18884075|18880636 AGACTGA 7mer-A1 dme-miR-14-3p X + 18879380 18879468 3'utr CG34401 FlyBase G47365.1 GTGTGTGTGTGTGCGTGTGAGCATTTTAGACTGAGATATCTGCCAACAACAACAAATACCGATGCCCACACACAGGCACACACCCACGC 39 18879405 0.977934613 11 37 251 0.965517241 1.447158031 0 0.384615385 0.586206897 39 1 1 56 X:18879380-18879468 7 57.5 987 FBgn0085430 1429.756667 16.81 26.06 0.040216634 3.420582986 2.206446662 2 2 2 0.5 dme-miR-11-3p 8mer-m1 CTGTGATG X 18887517 18887524 + X_18887517_18887524_+ 0.451848276 0.441775908 0.446812092 0.007122262 CG7332 FBtr0342877|FBtr0074647 18887445|18887445 18888860|18887605 X + 18887481 18887547 3'utr CG7332 FlyBase G62800.1 AGGTGTGCCAGAATCGCATGGAACGGCATGGACATACTGTGATGGAGGAAACACTGATGTAAACAGA 46 18887515 0.957914001 7 40 190 0.884615385 1.361727836 0.403846154 0.130434783 0.230769231 46 5 1 46 X:18887481-18887547 8 CG7332 FBtr0342877|FBtr0074647 18887445|18887445 18888860|18887605 CTGTGATG 8mer-m1 dme-miR-11-3p X + 18887495 18887549 3'utr CG7332 FlyBase G47376.1 CGCATGGAACGGCATGGACATACTGTGATGGAGGAAACACTGATGTAAACAGAAG 34 18887511 0.765145744 5 29 136 0.890625 1.755874856 0.59375 0.558823529 0.765625 34 7 0 57 X:18887495-18887549 8 38 988 FBgn0030973 1168.416667 41.72 64.31666667 0.032522645 0.910834132 0.590826639 2 6 4 0.5 dme-miR-283-5p 8mer-m1 TGATATTT X 19028303 19028310 + X_19028303_19028310_+ 0.505207565 0.510372274 0.50778992 0.003651994 CG43759 FBtr0332994 19013347 19028629 X + 19028285 19028323 3'utr CG43759 FlyBase G62823.1 AACAAAAAGCTTAAAATGTGATATTTTATAAAAACTAAT 9 19028297 0.831170776 4 8 79 0.888888889 0.602059991 0 0 0 9 0 1 8 X:19028285-19028323 8 CG43759 FBtr0332994 19013347 19028629 TGATATTT 8mer-m1 dme-miR-283-5p X + 19028288 19028322 3'utr CG43759 FlyBase G47391.1 AAAAAGCTTAAAATGTGATATTTTATAAAAACTAA 7 19028308 0.670984184 4 6 58 0.818181818 0.954242509 0 0.428571429 0.636363636 7 2 0 9 X:19028288-19028322 8 8 989 FBgn0264090 9.64 0.236666667 0.363333333 0.829875519 33.8028169 22.01834862 6 -5 0.5 0.5 dme-miR-277-3p 7mer-A1 GCATTTA X 19181804 19181810 + X_19181804_19181810_+ 0.496725255 0.690608707 0.593666981 0.137096267 CG7453 FBtr0074666 19181192 19182024 X + 19181706 19181846 3'utr CG7453 FlyBase G62832.1 GCATCCACAATCTAGCCGTAATGTGCCTTACGAACCAGCTCTATATACACCTTTACACATGATATTCTCCATCGCCGGGTCTTCGAGGTGATTTCTTCGCATTTACTTTACGCAACCAAGCAGCAGCACTCACTCAAAAAA 87 19181798 0.878989673 20 72 593 0.831858407 1.672097858 0.17699115 0.218390805 0.398230088 87 18 1 94 X:19181706-19181846 7 CG7453 FBtr0074666 19181192 19182024 GCATTTA 7mer-A1 dme-miR-277-3p X + 19181714 19181814 3'utr CG7453 FlyBase G47397.1 AATCTAGCCGTAATGTGCCTTACGAACCAGCTCTATATACACCTTTACACATGATATTCTCCATCGCCGGGTCTTCGAGGTGATTTCTTCGCATTTACTTT 26 19181798 0.948156797 13 25 194 0.975 1.290034611 0.225 0.384615385 0.6 26 0 1 39 X:19181714-19181814 7 6 990 FBgn0030991 1383.076667 90.74333333 138.8333333 0.004338154 0.06612056 0.043217287 6 6 6 0.5 dme-miR-1006-3p 6mer2-7 GAATTT X 19195673 19195678 + X_19195673_19195678_+ 0.908296522 0.903769027 0.906032774 0.003201426 CG14194 FBtr0074671|FBtr0336701 19195450|19195450 19196037|19196037 X + 19195652 19195723 3'utr CG14194 FlyBase G62849.1 CGTAGCTTTTAGACTTGTACTGAATTTTAATTGTAAGACAAACGCTAACACCGCCCACGAACCATGTCCAAC 30 19195668 0.99173232 11 25 263 0.828571429 0.985276743 0.085714286 0.1 0.228571429 30 4 2 29 X:19195652-19195723 6 CG14194 FBtr0336701|FBtr0074671 19195450|19195450 19196037|19196037 GAATTT 6mer2-7 dme-miR-1006-3p X + 19195649 19195693 3'utr CG14194 FlyBase G47405.1 CGTCGTAGCTTTTAGACTTGTACTGAATTTTAATTGTAAGACAAA 11 19195668 0.740565461 8 9 95 0.785714286 1.041392685 0.071428571 0.272727273 0.428571429 11 3 0 11 X:19195649-19195693 6 17 991 FBgn0030996 477.9966667 30.26333333 46.23333333 0.035565102 0.561735874 0.367700072 5 5 5 0.5 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 19245030 19245036 + X_19245030_19245036_+ 0.710668733 0.762456026 0.73656238 0.036619151 CG7889 FBtr0074675 19244824 19245224 X + 19245016 19245051 3'utr CG7889 FlyBase G62859.1 TTTGTATCTAATTTCCAAAGAATTTGACTTAAGCAG 16 19245028 0.782570765 3 16 133 1 1.230448921 0.235294118 0.0625 0.117647059 16 0 0 17 X:19245016-19245051 7 CG7889 FBtr0074675 19244824 19245224 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X + 19245015 19245052 3'utr CG7889 FlyBase G47411.1 TTTTGTATCTAATTTCCAAAGAATTTGACTTAAGCAGT 11 19245028 0.781801197 3 11 116 1 1.146128036 0.428571429 0.181818182 0.357142857 11 0 0 14 X:19245015-19245052 7 13.5 992 FBgn0031003 189 15.83 24.33666667 0.071428571 0.852811118 0.554718532 2 2 2 0.5 dme-miR-263a-5p 6mer3-8 GTGCCA X 19271941 19271946 + X_19271941_19271946_+ 0.928386534 0.897453379 0.912919956 0.021873005 Vav FBtr0074678|FBtr0333759|FBtr0113316|FBtr0074677 19271577|19271577|19271577|19271577 19273280|19272089|19272089|19272089 X + 19271916 19271963 3'utr Vav FlyBase G62876.1 TTTGCGTCGTCTGCTCGAAACATTTGTGCCAATCACCGGAAAATTACA 6 19271939 0.957373768 5 6 33 1 0.954242509 0 0.5 0.666666667 6 0 0 9 X:19271916-19271963 6 Vav FBtr0113316|FBtr0074677|FBtr0074678|FBtr0333759 19271577|19271577|19271577|19271577 19272089|19272089|19273280|19272089 GTGCCA 6mer3-8 dme-miR-263a-5p X + 19271918 19271960 3'utr Vav FlyBase G47423.1 TGCGTCGTCTGCTCGAAACATTTGTGCCAATCACCGGAAAATT 5 19271948 0.956761419 3 5 30 1 0.84509804 0 0.2 0.428571429 5 0 0 7 X:19271918-19271960 6 5.5 993 FBgn0040068 329.8133333 9.073333333 13.89 0.0166761 0.606171932 0.395968323 2 -7 -2.5 0.5 dme-miR-980-3p 7mer-m8 GGCAGCT X 19273140 19273146 + X_19273140_19273146_+ 0.617545684 0.658571988 0.638058836 0.029009975 Vav FBtr0074678 19271577 19273280 X + 19273108 19273165 3'utr Vav FlyBase G62880.1 CGCTCGCCTGCTGTCCCTTTCCCTTTCGCATCGGCAGCTCCAAAATTATTGTTAAGTA 15 19273138 0.892096526 5 14 132 0.933333333 1.146128036 0 0 0 15 1 0 14 X:19273108-19273165 7 Vav FBtr0074678 19271577 19273280 GGCAGCT 7mer-m8 dme-miR-980-3p X + 19273117 19273164 3'utr Vav FlyBase G47426.1 GCTGTCCCTTTCCCTTTCGCATCGGCAGCTCCAAAATTATTGTTAAGT 13 19273137 0.795250234 8 12 102 0.952380952 1.301029996 0 0.307692308 0.571428571 13 1 0 20 X:19273117-19273164 7 12.5 994 FBgn0040068 329.8133333 9.073333333 13.89 0.037900226 1.377663483 0.899928006 2 3 2.5 0.5 dme-miR-283-5p 8mer-A1 TGATATTA X 19570999 19571006 - X_19570999_19571006_- 0.490109445 0.564316911 0.527213178 0.052472626 Tao FBtr0304000|FBtr0303999 19570645|19569719 19571580|19571580 X - 19570967 19571018 5'utr Tao FlyBase G69059.1 TAAAGTCTAATTTGATATTATTACCGGATAACTGAATCAATCACACAATTTT 8 19571007 0.995075438 3 6 73 0.8 0.903089987 0.4 0.25 0.4 8 2 0 8 X:19570967-19571018 8 Tao FBtr0304000|FBtr0303999 19570645|19569719 19571580|19571580 TGATATTA 8mer-A1 dme-miR-283-5p X - 19570974 19571030 5'utr Tao FlyBase G51935.1 AAGTGTTTAAATTAAAGTCTAATTTGATATTATTACCGGATAACTGAATCAATCACA 8 19571007 0.983233516 4 7 72 1 1.146128036 0.142857143 0.625 0.785714286 8 0 0 14 X:19570974-19571030 8 6.5 995 FBgn0031030 4262.23 160.5366667 246.0233333 0.001525023 0.040489193 0.026420258 1 1 1 0.5 dme-miR-305-3p 6mer3-8 ATGTGC X 19627148 19627153 - X_19627148_19627153_- 0.620221807 0.678306611 0.649264209 0.041072156 e(y)3 FBtr0334278 19626546 19628098 X - 19627067 19627172 3'utr e(y)3 FlyBase G69091.1 CAGCCTAAGTAGTGTCTTCATGTGCGGTAGCTGCTTGTCCTTTTTTTTTTCGATTCGTTTAGTTTAGATTCGGTAGATTCGTAAGCGGGGTAGGGACTTGGCTCGG 34 19627151 0.98567455 12 30 290 0.897435897 1.544068044 0.179487179 0.088235294 0.205128205 34 4 0 35 X:19627067-19627172 6 e(y)3 FBtr0334278 19626546 19628098 ATGTGC 6mer3-8 dme-miR-305-3p X - 19627126 19627216 3'utr e(y)3 FlyBase G51957.1 ATTTATAAGAACCACGCCCTCTAGCCCATGTAAGTAGTTAAGCACAGCCTAAGTAGTGTCTTCATGTGCGGTAGCTGCTTGTCCTTTTTTT 19 19627141 0.980642167 7 19 140 1 1.491361694 0.451612903 0.368421053 0.612903226 19 0 0 31 X:19627126-19627216 6 18 996 FBgn0087008 1841.593333 29.13666667 44.69333333 0.009774145 0.617778286 0.40274463 -2 -12 -7 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 19694392 19694398 - X_19694392_19694398_- 0.515557985 0.50587762 0.510717802 0.006845076 CG14229 FBtr0335023|FBtr0335023|FBtr0335023|FBtr0074753|FBtr0074753|FBtr0074753|FBtr0344968|FBtr0344968|FBtr0344968 19693975|19693975|19693975|19694196|19694196|19694196|19694196|19694196|19694196 19694566|19694566|19694566|19694566|19694566|19694566|19694566|19694566|19694566 X - 19694348 19694462 3'utr CG14229 FlyBase G69165.1 CGCCTCCGTTCAGTCTTCTCTGCGCACGGATTCGGATATCCGTGTCTGGAGTCACTTGCGTTTGTGTGATAAGCATTGTTTACTTGCATGGCATTAGCATCACCCCTGATGCATA 74 19694400 0.718083136 18 69 579 0.939759036 1.591064607 0.13253012 0.121621622 0.21686747 74 4 1 78 X:19694348-19694462 7 CG14229 FBtr0344968|FBtr0344968|FBtr0344968|FBtr0074753|FBtr0074753|FBtr0074753|FBtr0335023|FBtr0335023|FBtr0335023 19694196|19694196|19694196|19694196|19694196|19694196|19693975|19693975|19693975 19694566|19694566|19694566|19694566|19694566|19694566|19694566|19694566|19694566 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 19694354 19694426 3'utr CG14229 FlyBase G52014.1 TATCCGTGTCTGGAGTCACTTGCGTTTGTGTGATAAGCATTGTTTACTTGCATGGCATTAGCATCACCCCTGA 42 19694400 0.896901871 9 35 332 0.861538462 1.748188027 0.092307692 0.333333333 0.569230769 42 9 0 56 X:19694354-19694426 7 37 997 FBgn0031059 134 20.55333333 31.35333333 0.276119403 1.800194616 1.18009781 2 2 2 0.5 dme-miR-8-3p 7mer-m8 CAGTATT X 19905160 19905166 + X_19905160_19905166_+ 0.661004006 0.593442758 0.627223382 0.047772983 Hers FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800|FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19906687|19906687|19906687|19906687|19908108|19908108|19906687|19906687 X + 19905142 19905178 3'utr Hers FlyBase G63193.1 ATTGTTTTGATCAGTCTACAGTATTGTTAAAGATATT 19 19905158 0.612760804 6 17 186 0.9 1.255272505 0 0.052631579 0.1 19 2 0 18 X:19905142-19905178 7 Hers FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523|FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19908108|19908108|19906687|19906687|19906687|19906687|19906687|19906687 CAGTATT 7mer-m8 dme-miR-8-3p X + 19905127 19905180 3'utr Hers FlyBase G47652.1 TAGAGAGAAAGTTACATTGTTTTGATCAGTCTACAGTATTGTTAAAGATATTTT 19 19905157 0.989674669 8 18 176 0.961538462 1.397940009 0.192307692 0.263157895 0.461538462 19 1 0 25 X:19905127-19905180 7 18 998 FBgn0052529 4274.003333 62.55666667 96.43 0.004211508 0.287739117 0.186663901 2 3 2.5 0.5 dme-miR-317-3p 7mer-m8 TGTGTTC X 19906402 19906408 + X_19906402_19906408_+ 0.590507401 0.569883093 0.580195247 0.014583582 Hers FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800|FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19906687|19906687|19906687|19906687|19908108|19908108|19906687|19906687 X + 19906234 19906460 3'utr Hers FlyBase G63201.1 TCTAACTATAATTTCTGACATATTTGAGATTTCTGGCTCCAGAGGCGGAAAACTGGATGGCTTGACATCGATCCTTGCTAGGCGCTGTTGGTATATATTTTTATTTGTTGTTAGTTTTTGTAAGCGATTGAACACACATTTTGTACTCTTGATTTGACATTTATCTTTTGTGTTCGCCTTAGTTTGGAAATTTGATTTCAGAGACATGATTTTCTTTCGGTTAACTA 99 19906401 0.965066754 35 93 938 0.947826087 2.037426498 0.252173913 0.141414141 0.260869565 99 6 0 109 X:19906234-19906460 7 Hers FBtr0100839|FBtr0332993|FBtr0306521|FBtr0306523|FBtr0074801|FBtr0306520|FBtr0306522|FBtr0074800 19904957|19904957|19904957|19904957|19904957|19904957|19904957|19904957 19908108|19908108|19906687|19906687|19906687|19906687|19906687|19906687 TGTGTTC 7mer-m8 dme-miR-317-3p X + 19906244 19906445 3'utr Hers FlyBase G47659.1 ATTTCTGACATATTTGAGATTTCTGGCTCCAGAGGCGGAAAACTGGATGGCTTGACATCGATCCTTGCTAGGCGCTGTTGGTATATATTTTTATTTGTTGTTAGTTTTTGTAAGCGATTGAACACACATTTTGTACTCTTGATTTGACATTTATCTTTTGTGTTCGCCTTAGTTTGGAAATTTGATTTCAGAGACATGATTT 41 19906401 0.989288363 20 40 390 0.984375 1.799340549 0.171875 0.43902439 0.640625 41 1 0 63 X:19906244-19906445 7 14 999 FBgn0052529 4274.003333 62.55666667 96.43 0.003275617 0.223797091 0.145183034 1 1 1 0.5 "dme-miR-996-3p,dme-miR-279-3p" 7mer-A1 CTAGTCA X 20168120 20168126 - X_20168120_20168126_- 0.806827321 0.803216539 0.80502193 0.002553221 CG9581 FBtr0070026 20168040 20168150 X - 20168093 20168150 3'utr CG9581 FlyBase G69253.1 GAGCTCACAACGAAAACCAAATTCCTAGTCATAAGCCTTTCATTCTCCCGACAACCTT 29 20168129 0.96095212 4 28 138 0.945945946 1.544068044 0.216216216 0.275862069 0.432432432 29 2 0 35 X:20168093-20168150 7 CG9581 FBtr0070026 20168040 20168150 CTAGTCA 7mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X - 20168043 20168144 3'utr CG9581 FlyBase G52079.1 ACAACGAAAACCAAATTCCTAGTCATAAGCCTTTCATTCTCCCGACAACCTTATGAGCTGATTTGGGTCCTAAAGTAAAGGCAGATGCTGTATTTATAAATG 20 20168128 0.975116322 6 18 113 0.884615385 1.361727836 0.153846154 0.25 0.423076923 20 3 0 23 X:20168043-20168144 7 21.5 1000 FBgn0031093 169.6733333 10.98333333 16.82 0.126714078 1.957511381 1.27824019 3 2 2.5 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA X 20426559 20426566 - X_20426559_20426566_- 0.647329344 0.648927202 0.648128273 0.001129886 CG15456 FBtr0077323|FBtr0077323|FBtr0077323 20426507|20426507|20426507 20426645|20426645|20426645 X - 20426541 20426608 3'utr CG15456 FlyBase G69304.1 GCTTCACGCTTACACCAACATTTGTGGAACCCATTTGAAATCCTGTGATATATGGTATATACATATAT 39 20426568 0.815469078 8 34 326 0.88372093 1.102662342 0.186046512 0.102564103 0.186046512 39 3 2 38 X:20426541-20426608 8 CG15456 FBtr0077323|FBtr0077323|FBtr0077323 20426507|20426507|20426507 20426645|20426645|20426645 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 20426531 20426602 3'utr CG15456 FlyBase G52110.1 CGCTTACACCAACATTTGTGGAACCCATTTGAAATCCTGTGATATATGGTATATACATATATAATAATAAAT 24 20426568 0.964384997 10 23 201 1 1.568201724 0.162162162 0.333333333 0.567567568 24 0 0 37 X:20426531-20426602 8 27 1001 FBgn0040650 15.33333333 4.38 6.593333333 1.760869565 6.164383562 4.095045501 2 2 2 0.5 dme-miR-970-3p 6mer3-8 TCTTAT X 20516257 20516262 - X_20516257_20516262_- 0.792193488 0.521954982 0.657074235 0.191087476 Tak1 FBtr0077319|FBtr0340404 20515906|20515906 20516300|20516300 X - 20516244 20516309 stop_codon Tak1 FlyBase G69333.1 AATGCGTAGTCTCGTGCGCTGCCGATTCGATCGATCGACTCTCTATGTCTTATAGGCTAGTACTCT 9 20516260 0.758871517 9 9 72 1 1 0.4 0.111111111 0.2 9 0 0 10 X:20516244-20516309 6 Tak1 FBtr0077319|FBtr0340404 20515906|20515906 20516300|20516300 TCTTAT 6mer3-8 dme-miR-970-3p X - 20516243 20516307 stop_codon Tak1 FlyBase G52127.1 TGCGTAGTCTCGTGCGCTGCCGATTCGATCGATCGACTCTCTATGTCTTATAGGCTAGTACTCTA 11 20516290 0.810567704 6 10 83 0.875 1.322219295 0.333333333 0.727272727 0.875 11 3 0 21 X:20516243-20516307 6 5 1002 FBgn0026323 737.6966667 30.11333333 45.87333333 0.006777854 0.166039407 0.108995785 -2 28 13 0.5 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 2055118 2055125 + X_2055118_2055125_+ 0.586534518 0.5781285 0.582331509 0.00594394 CG4313 FBtr0340109|FBtr0340108|FBtr0340107 2054944|2054944|2054944 2055414|2055414|2055414 X + 2055099 2055148 3'utr CG4313 FlyBase G58179.1 AGTGCCTCCAAAAAAGATTTCTAGTCACATGATCCGGCCGGTCGTCCCTT 14 2055117 0.976627208 4 13 87 0.882352941 1.176091259 0.235294118 0.142857143 0.294117647 14 2 0 15 X:2055099-2055148 8 CG4313 FBtr0340107|FBtr0340109|FBtr0340108 2054944|2054944|2054944 2055414|2055414|2055414 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X + 2055097 2055132 3'utr CG4313 FlyBase G44006.1 ATAGTGCCTCCAAAAAAGATTTCTAGTCACATGATC 8 2055117 0.978349085 2 6 35 0.777777778 0.84509804 0.222222222 0.125 0.222222222 8 2 0 7 X:2055097-2055132 8 9.5 1003 FBgn0025632 50.11333333 3.046666667 4.636666667 0.189570307 3.118161926 2.048885694 1 1 1 0.5 dme-miR-317-3p 7mer-m8 TGTGTTC X 21050232 21050238 - X_21050232_21050238_- 0.642360202 0.653915201 0.648137702 0.008170619 CG1518 FBtr0345923|FBtr0077264 21049883|21049962 21050270|21050270 X - 21050109 21050316 stop_codon CG1518 FlyBase G69358.1 GGTGCGCATCTACAAGGTTAAGGATCTGCCGAATCGTGGAGTCTGAGAAATAAGTGTCGCAGTCATTCCGCTCTATTCTGTGTTCTGTACATTAGCTAACTCTGCCCGTCTCCCTCTATCTCGAATATTTGGCAATCTCTCTCGCTCTATGAGCACCAATTGCTGCATTCTCCTGCTTTGCCCATCATGCATTTAGTTCTACACTGGC 211 21050240 0.896288387 34 202 1959 0.957198444 2.390935107 0.13618677 0.184834123 0.3307393 211 11 0 246 X:21050109-21050316 7 CG1518 FBtr0345923|FBtr0077264 21049883|21049962 21050270|21050270 TGTGTTC 7mer-m8 dme-miR-317-3p X - 21050081 21050382 stop_codon CG1518 FlyBase G52149.1 CGAGATCGGCAACAAGGACTTTGAACTGGATGTCATGGAGGAGGCGTACACCACGGAGCACTGGCTGGTGCGCATCTACAAGGTTAAGGATCTGCCGAATCGTGGAGTCTGAGAAATAAGTGTCGCAGTCATTCCGCTCTATTCTGTGTTCTGTACATTAGCTAACTCTGCCCGTCTCCCTCTATCTCGAATATTTGGCAATCTCTCTCGCTCTATGAGCACCAATTGCTGCATTCTCCTGCTTTGCCCATCATGCATTTAGTTCTACACTGGCACAAAACCACAAAAACCAAGTATTTTTT 155 21050240 0.987604808 37 145 1296 0.94092827 1.503206823 0.126582278 0.35483871 0.578059072 155 8 6 223 X:21050081-21050382 7 92.5 1004 FBgn0031149 1278.48 56.59333333 86.55 0.072351542 1.634468135 1.068746389 2 2 2 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA X 21062678 21062685 - X_21062678_21062685_- 0.639569301 0.640129836 0.639849568 0.000396333 CG32512 FBtr0077262|FBtr0077262|FBtr0077262|FBtr0340438|FBtr0340438|FBtr0340438|FBtr0332848|FBtr0332848|FBtr0332848|FBtr0332847|FBtr0332847|FBtr0332847 21062382|21062382|21062382|21062275|21062275|21062275|21062382|21062382|21062382|21062420|21062420|21062420 21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966 X - 21062595 21063085 stop_codon CG32512 FlyBase G69375.1 AGCGCATCCACAAGGGATTCCGGCGCATTCACATGACCATCGCCATTGGCAATATGACGGTCATGCTGACCACCTGCCTGCAGCTGTATTTTCTGGCATCGAAAATACGCCTTAGCTAAGGCAAGCCCGAAGTGAAGAATTTATAGATTTAGGTATCCACCACATAACAACGCATACACACACACACACATTACTACTACTGTACGTTCCACGTTCGATAAATGTCTCAAATTCAAATATGGCTTATTGAACACTTGAGTTTTTGAACTGGTCCTCCATCCGGCCCCAAATGCCCTTCCTCCGCCCCACACACGCCCACACCACCCATACGCCCATGCACGAAAATATTTAATTTCTCCCAAGGACGCCTTGTTTGCGACGACCTTTCCAATCTGATTTCCTGTGATAAACTCAGCCCAAAACTCCCAAAACAAAACACCCACCCGCAAACCACAGCACATTTAGCCTAGAGTTGATAGCCAATAATTTAC 887 21062688 0.984465956 77 817 6566 0.924783028 1.867875255 0.107039537 0.145434047 0.269045323 887 66 12 959 X:21062595-21063085 8 CG32512 FBtr0332847|FBtr0332847|FBtr0332847|FBtr0332848|FBtr0332848|FBtr0332848|FBtr0340438|FBtr0340438|FBtr0340438|FBtr0077262|FBtr0077262|FBtr0077262 21062420|21062420|21062420|21062382|21062382|21062382|21062275|21062275|21062275|21062382|21062382|21062382 21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966|21062966 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 21062645 21062732 3'utr CG32512 FlyBase G52166.1 TTCTCCCAAGGACGCCTTGTTTGCGACGACCTTTCCAATCTGATTTCCTGTGATAAACTCAGCCCAAAACTCCCAAAACAAAACACCC 443 21062688 0.986273785 17 403 3534 0.907378336 2.062957834 0.09733124 0.340857788 0.541601256 443 55 4 578 X:21062645-21062732 8 529 1005 FBgn0052512 150.89 8.04 12.13666667 3.5058652 65.7960199 43.58692667 3 3 3 0.5 dme-miR-277-3p 7mer-A1 GCATTTA X 21078535 21078541 + X_21078535_21078541_+ 0.443790415 0.749513228 0.596651821 0.216178665 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 X + 21078525 21078594 3'utr bves FlyBase G63329.1 TTACCGCTTGGCATTTACTGGAAATTTACTGTGCTGGCACATCAATCAAGTCTCTAAATCTTCCATTAAC 12 21078533 0.856169551 8 12 76 1 1.204119983 0.25 0.333333333 0.5 12 0 0 16 X:21078525-21078594 7 bves FBtr0077246|FBtr0077247 21077106|21077106 21078937|21078937 GCATTTA 7mer-A1 dme-miR-277-3p X + 21078516 21078586 3'utr bves FlyBase G47754.1 TCTTATTTCTTACCGCTTGGCATTTACTGGAAATTTACTGTGCTGGCACATCAATCAAGTCTCTAAATCTT 10 21078533 0.989496815 3 8 91 0.9375 1.176091259 0.4375 0.4 0.625 10 1 0 15 X:21078516-21078586 7 6.5 1006 FBgn0031150 459.0933333 15.14333333 23.32333333 0.014158341 0.429231785 0.278690868 2 2 2 0.5 dme-miR-34-5p 7mer-A1 ACTGCCA X 2116135 2116141 - X_2116135_2116141_- 0.696212975 0.750282545 0.72324776 0.03823291 ph-d FBtr0070433|FBtr0112843 2115725|2115725 2116865|2116865 X - 2116076 2116202 3'utr ph-d FlyBase G64261.1 TAGCAAGAGGGGTAATATCGTAGCTCAAATGACAGGACGCCACATGTATGATAGAGCATAGACTGCCATCCCAGTCATCAATTCATCACTTTGTATAGAAGTTCACAATTACTCATAATCACTAACG 1317 2116144 0.919919228 17 1284 5161 0.973951715 2.583482164 0.195679797 0.1579347 0.295425667 1317 38 3 1533 X:2116076-2116202 7 ph-d FBtr0070433|FBtr0112843 2115725|2115725 2116865|2116865 ACTGCCA 7mer-A1 dme-miR-34-5p X - 2116120 2116337 3'utr ph-d FlyBase G48452.2 TGACCATGCTGATCTCCCACGACCTTTGCATGGACCTTTGCCTACCTGTGGACCGGGTCCAACCGGGTCTGCCACCCAAGCTGAATTTGATTCACTTGAAGCGGACTTTCAATCCTTTTGTACGTAATCTAAACATAGCAAGAGGGGTAATATCGTAGCTCAAATGACAGGACGCCACATGTATGATAGAGCATAGACTGCCATCCCAGTCATCAATT 834 2116144 0.9406239 25 814 3229 0.978613569 2.423900919 0.205752212 0.42206235 0.644542773 834 25 4 1327 X:2116120-2116337 7 653 1007 FBgn0004860 503.0533333 10.12666667 15.45333333 1.2980731 64.48321264 42.25625539 3 3 3 0.5 dme-bantam-3p 6mer3-8 TGATCT X 21327734 21327739 + X_21327734_21327739_+ 0.740441798 0.907657726 0.824049762 0.118239497 CG1486 FBtr0077190|FBtr0077191 21327402|21327402 21328150|21328150 X + 21327670 21327765 3'utr CG1486 FlyBase G63380.1 AGATGATGATGATATGATCCAATTGAATTGCTTTTATGTATTTATATGTATATGGCTATTTCTATGATCTTTTATATATCTCCATTATATATTATA 72 21327734 0.994667713 8 69 949 0.967032967 1.944482672 0 0.180555556 0.351648352 72 3 0 88 X:21327670-21327765 6 CG1486 FBtr0077190|FBtr0077191 21327402|21327402 21328150|21328150 TGATCT 6mer3-8 dme-bantam-3p X + 21327719 21327750 3'utr CG1486 FlyBase G47786.1 ATATGGCTATTTCTATGATCTTTTATATATCT 31 21327734 0.706210673 5 30 374 0.95 1.579783597 0 0.258064516 0.425 31 2 0 38 X:21327719-21327750 6 50 1008 FBgn0031174 458.93 15.08666667 23.13333333 0.108949077 3.314184711 2.161383285 0 0 0 0.5 dme-miR-965-3p 7mer-m8 TACGCTT X 21327843 21327849 + X_21327843_21327849_+ 0.572493168 0.611287895 0.591890532 0.027431995 CG1486 FBtr0077190|FBtr0077191 21327402|21327402 21328150|21328150 X + 21327768 21327858 3'utr CG1486 FlyBase G63381.1 ATTTTACCTTATACTTTACTCCCACCATTATTGTTGATTATGATCAGAGGGAAATGTGCGTAACTTCGTCCTCTTTACGCTTTTATTTTTT 22 21327842 0.990855124 8 21 222 0.931034483 0.954242509 0.068965517 0.318181818 0.482758621 22 0 2 27 X:21327768-21327858 7 CG1486 FBtr0077190|FBtr0077191 21327402|21327402 21328150|21328150 TACGCTT 7mer-m8 dme-miR-965-3p X + 21327825 21327859 3'utr CG1486 FlyBase G47788.1 GCGTAACTTCGTCCTCTTTACGCTTTTATTTTTTT 9 21327842 0.824757672 4 9 99 1 1 0 0.111111111 0.2 9 0 0 10 X:21327825-21327859 7 12 1009 FBgn0031174 458.93 15.08666667 23.13333333 0.026147779 0.795404331 0.518731988 1 1 1 0.5 dme-miR-317-3p 6mer3-8 TGTGTT X 21361347 21361352 + X_21361347_21361352_+ 0.542144497 0.982880558 0.762512527 0.311647485 1-Sep FBtr0077198 21360837 21361688 X + 21361184 21361381 3'utr 1-Sep FlyBase G63439.1 CTTCTATCAAGCGAAACCACACACGAAAACAATTGTATTCCTATTATGTATTTAGACGCGATTAACAATGAATTATTATTGTAATACGCATCTAGGCTAAGCGAATCCAATCCGATTTATATTGTATGTTAATTCATTTTTGTCTGTTTACCTTACCCTTATCTGTGTTGTCTCAAAGCGAGCAATTTATTTAGGTTA 115 21361336 0.990917614 28 107 1107 0.9375 1.829303773 0.215277778 0.208695652 0.368055556 115 8 1 135 X:21361184-21361381 6 1-Sep FBtr0077198 21360837 21361688 TGTGTT 6mer3-8 dme-miR-317-3p X + 21361320 21361370 3'utr 1-Sep FlyBase G47833.1 TTTTTGTCTGTTTACCTTACCCTTATCTGTGTTGTCTCAAAGCGAGCAATT 52 21361336 0.835280442 10 46 498 0.894736842 1.355387658 0.157894737 0.365384615 0.565789474 52 6 2 68 X:21361320-21361370 6 51.5 1010 FBgn0011710 1695 101.9 156.09 0.030383481 0.505397448 0.329937856 11 11 11 0.5 dme-miR-980-3p 7mer-A1 GCAGCTA X 2150460 2150466 - X_2150460_2150466_- 0.764525807 0.733646035 0.749085921 0.021835316 wapl FBtr0070430|FBtr0344159|FBtr0070429 2150105|2149934|2150105 2150876|2150876|2150876 X - 2150437 2150477 3'utr wapl FlyBase G64288.1 AAGCAATATTAGCAGCTAAATGTCGGCTTACCCTCGAAAGC 15 2150449 0.696462347 5 13 78 0.761904762 1.204119983 0 0.333333333 0.523809524 15 5 0 16 X:2150437-2150477 7 wapl FBtr0070430|FBtr0344159|FBtr0070429 2150105|2149934|2150105 2150876|2150876|2150876 GCAGCTA 7mer-A1 dme-miR-980-3p X - 2150437 2150488 3'utr wapl FlyBase G48468.1 TATATAGTCATAAGCAATATTAGCAGCTAAATGTCGGCTTACCCTCGAAAGC 9 2150468 0.954417298 4 9 43 1 1.041392685 0.181818182 0.222222222 0.363636364 9 0 0 11 X:2150437-2150488 7 9.5 1011 FBgn0004655 814.8266667 14.46333333 22.20666667 0.011658921 0.656833372 0.42779946 -17 2 -7.5 0.5 dme-miR-33-5p 8mer-A1 CAATGCAA X 22447609 22447616 + X_22447609_22447616_+ 0.530897535 0.55237552 0.541636527 0.015187239 CG14621 FBtr0339557 22446988 22447808 X + 22447562 22447635 3'utr CG14621 FlyBase G63513.1 TTTGATTCAGTCAAAAGTGCGTAATATATGTATATATACCTAGAATGCAATGCAATGCTGTAAATAAAATGTAT 14 22447617 0.890200114 5 12 104 0.928571429 1.113943352 0.214285714 0 0 14 1 0 13 X:22447562-22447635 8 CG14621 FBtr0339557 22446988 22447808 CAATGCAA 8mer-A1 dme-miR-33-5p X + 22447549 22447626 3'utr CG14621 FlyBase G47882.1 CGAAAATGTCAAATTTGATTCAGTCAAAAGTGCGTAATATATGTATATATACCTAGAATGCAATGCAATGCTGTAAAT 13 22447608 0.974828724 7 12 76 1 1.380211242 0.208333333 0.461538462 0.708333333 13 0 0 24 X:22447549-22447626 8 9 1012 FBgn0031183 252.9033333 14.79333333 22.64 0.03558672 0.608382154 0.397526502 -8 1 -3.5 0.5 dme-miR-184-5p 7mer-A1 GATAAGA X 22452192 22452198 - X_22452192_22452198_- 0.566955588 0.77779404 0.672374814 0.149085262 wap FBtr0309240|FBtr0339498|FBtr0305147|FBtr0077368 22451554|22451443|22451554|22451998 22453229|22453229|22453229|22453229 X - 22452164 22452222 3'utr wap FlyBase G69546.1 AGCAAACAAACTATGATCATTTCAGATAAGACACGACCCTCCATCAATAATCTCAAATC 10 22452209 0.965462633 5 10 53 1 1.079181246 0.083333333 0.2 0.333333333 10 0 0 12 X:22452164-22452222 7 wap FBtr0305147|FBtr0077368|FBtr0309240|FBtr0339498 22451554|22451998|22451554|22451443 22453229|22453229|22453229|22453229 GATAAGA 7mer-A1 dme-miR-184-5p X - 22452164 22452219 3'utr wap FlyBase G52303.1 AAACAAACTATGATCATTTCAGATAAGACACGACCCTCCATCAATAATCTCAAATC 6 22452209 0.973455655 5 6 34 1 0.954242509 0 0.333333333 0.555555556 6 0 0 9 X:22452164-22452219 7 5 1013 FBgn0266848 2356.2 87.30666667 134.59 0.002122061 0.057269395 0.037149863 11 11 11 0.5 dme-miR-1012-3p 6mer2-7 TGACTA X 22475423 22475428 - X_22475423_22475428_- 0.443345364 0.534278505 0.488811934 0.064299412 CG12576 FBtr0077366|FBtr0346429|FBtr0077365|FBtr0335046 22474849|22474849|22474849|22474849 22475730|22475730|22475730|22475730 X - 22475378 22475445 3'utr CG12576 FlyBase G69571.1 ATTTAACCCTATGGTTATGACTATTTTACTTTATGACTTTAGTTTGTATTTGTCCTGTGTGTTTATCT 20 22475421 0.683394929 13 18 244 0.92 1.06069784 0.12 0.25 0.4 20 1 1 23 X:22475378-22475445 6 CG12576 FBtr0335046|FBtr0077365|FBtr0346429|FBtr0077366 22474849|22474849|22474849|22474849 22475730|22475730|22475730|22475730 TGACTA 6mer2-7 dme-miR-1012-3p X - 22475368 22475442 3'utr CG12576 FlyBase G52322.1 TAACCCTATGGTTATGACTATTTTACTTTATGACTTTAGTTTGTATTTGTCCTGTGTGTTTATCTACTGACCGCA 9 22475407 0.996270749 6 7 107 0.857142857 1.079181246 0.214285714 0.444444444 0.642857143 9 2 0 12 X:22475368-22475442 6 7.5 1014 FBgn0031190 668.0366667 33.82666667 51.78333333 0.011226929 0.221718565 0.144834245 -7 -21 -14 0.5 dme-miR-283-5p 8mer-A1 TGATATTA X 2264611 2264618 + X_2264611_2264618_+ 0.548314479 0.526843957 0.537579218 0.015181936 CG3071 FBtr0070398 2264570 2264825 X + 2264585 2264645 3'utr CG3071 FlyBase G58340.1 AGAACAACGATATAGCCACATAGCTTTGATATTAAGTATATAAGTAGTAGTAGTTTAAGTA 12 2264597 0.880785553 5 10 93 0.8 0.602059991 0 0.25 0.4 12 1 2 12 X:2264585-2264645 8 CG3071 FBtr0070398 2264570 2264825 TGATATTA 8mer-A1 dme-miR-283-5p X + 2264579 2264621 3'utr CG3071 FlyBase G44124.1 CGACGTAGAACAACGATATAGCCACATAGCTTTGATATTAAGT 6 2264609 0.971427869 3 6 35 1 0.954242509 0 0.5 0.666666667 6 0 0 9 X:2264579-2264621 8 7.5 1015 FBgn0023527 429.3266667 27.48 42.32666667 0.017469215 0.272925764 0.177193259 14 2 8 0.5 dme-miR-970-3p 6mer3-8 TCTTAT X 2271144 2271149 - X_2271144_2271149_- 0.405075694 0.473904429 0.439490061 0.048669241 CG2918 FBtr0300792 2271006 2271490 X - 2271120 2271236 3'utr CG2918 FlyBase G64374.1 ATTTTCCATTTCCATACCATTCCGCATAGGAAATACAAGACTTGAAGAAGTACTCACACGGTCCCCTCTATATGTATATCCACTATATCTTATTGATCTATTGTAGCGAAAGTAGCG 60 2271143 0.877547231 14 54 437 0.916666667 1.51851394 0.069444444 0.116666667 0.263888889 60 5 1 66 X:2271120-2271236 6 CG2918 FBtr0300792 2271006 2271490 TCTTAT 6mer3-8 dme-miR-970-3p X - 2271081 2271165 3'utr CG2918 FlyBase G48517.1 ATGTATATCCACTATATCTTATTGATCTATTGTAGCGAAAGTAGCGAAACGAATTGGGCGGGATGAGTTAATTGCCGAGATAAGA 29 2271143 0.992766432 6 24 271 0.871794872 0.832508913 0.025641026 0.24137931 0.435897436 29 1 4 34 X:2271081-2271165 6 24.5 1016 FBgn0023529 3854.556667 145.7 223.8466667 0.006356114 0.168153741 0.109449921 -6 -6 -6 0.5 dme-bantam-3p 8mer-A1 TGATCTCA X 23080962 23080969 - X_23080962_23080969_- 0.619317706 0.61222991 0.615773808 0.005011831 CG17163 FBtr0113727|FBtr0309316 23080869|23080757 23081631|23081631 X - 23080920 23081098 3'utr CG17163 FlyBase G69629.1 CTTATATATTTACAAATGTACTTATATATCTTTAAGATAAATAGTGTACACGCCTAGATACACTCCAATTAATTAACTTTGGGTATCGTTCTACGAATTTTGCATACTGGATGTGTATTAAGGTGTATTTGATCTCATTCAATGATATTATTTGTGATGTAACAACTTCAAGGTAATTT 191 23080970 0.991529555 25 180 1950 0.941176471 1.84094208 0.113122172 0.109947644 0.230769231 191 11 2 208 X:23080920-23081098 8 CG17163 FBtr0309316|FBtr0113727 23080757|23080869 23081631|23081631 TGATCTCA 8mer-A1 dme-bantam-3p X - 23080899 23080998 3'utr CG17163 FlyBase G52367.1 TGCATACTGGATGTGTATTAAGGTGTATTTGATCTCATTCAATGATATTATTTGTGATGTAACAACTTCAAGGTAATTTCAATTATTCCCCTAAATGAAA 103 23080970 0.992618809 18 100 1158 0.979452055 2.155336037 0.123287671 0.359223301 0.547945205 103 3 0 143 X:23080899-23080998 8 100.5 1017 FBgn0039942 110.9 8.843333333 13.50666667 0.906221821 11.36449303 7.44076999 1 1 1 0.5 dme-miR-34-5p 7mer-A1 ACTGCCA X 253453 253459 + X_253453_253459_+ 0.711376264 0.703365468 0.707370866 0.005664491 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 X + 253422 253480 3'utr G9a FlyBase G57695.1 TCGAAGCCCGGTCGGCTTTCTTTCTTTTTTGACTGCCAAATGTTTCGTGGTTAACCACT 25 253450 0.936675989 8 23 248 0.935483871 1.462397998 0.193548387 0.24 0.387096774 25 2 0 29 X:253422-253480 7 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 ACTGCCA 7mer-A1 dme-miR-34-5p X + 253425 253472 3'utr G9a FlyBase G43659.1 AAGCCCGGTCGGCTTTCTTTCTTTTTTGACTGCCAAATGTTTCGTGGT 14 253450 0.70470411 5 14 157 1 1.146128036 0.428571429 0 0 14 0 0 14 X:253425-253472 7 17.5 1018 FBgn0040372 792.6533333 13.78666667 21.11333333 0.022077747 1.26934236 0.82886012 3 3 3 0.5 "dme-miR-275-3p,dme-miR-306-5p" 7mer-m8 GTACCTG X 253581 253587 + X_253581_253587_+ 0.629767049 0.595230586 0.612498817 0.024420923 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 X + 253537 253598 3'utr G9a FlyBase G57696.1 TTGTATTAATGTTTTACGCCTTATTAATAATGTTTTTATTCTTAGTACCTGTAAAAACAAAT 9 253588 0.982593782 5 9 72 1 1 0 0.111111111 0.2 9 0 0 10 X:253537-253598 7 G9a FBtr0332992|FBtr0070063 253260|253260 254650|254013 GTACCTG 7mer-m8 "dme-miR-275-3p,dme-miR-306-5p" X + 253565 253609 3'utr G9a FlyBase G43660.1 AATGTTTTTATTCTTAGTACCTGTAAAAACAAATTAGTTTATACT 6 253587 0.985584871 4 5 49 0.714285714 0.698970004 0 0.166666667 0.285714286 6 2 0 5 X:253565-253609 7 6.5 1019 FBgn0040372 792.6533333 13.78666667 21.11333333 0.008200306 0.471470019 0.30786233 -7 -6 -6.5 0.5 dme-miR-283-5p 8mer-A1 TGATATTA X 2584160 2584167 - X_2584160_2584167_- 0.31264979 0.394571321 0.353610555 0.057927248 CG13760 FBtr0308567|FBtr0300707 2583743|2583743 2584291|2584291 X - 2584114 2584254 3'utr CG13760 FlyBase G64453.1 CAGATGAATTGATGAACAGATGAACAGAAGTACCTGCCGTCGCCAGGTTGCCAGGTGATGAGAACGGATGATTGGAATCTGCGCTTGTGATATTAGGACTTTAGGAGGAGACCTTGTAGGGGGGGACTTCGAGTGGGAGGT 257 2584171 0.986532939 24 233 1991 0.9 1.638489257 0.306896552 0.120622568 0.220689655 257 24 5 261 X:2584114-2584254 8 CG13760 FBtr0300707|FBtr0308567 2583743|2583743 2584291|2584291 TGATATTA 8mer-A1 dme-miR-283-5p X - 2584119 2584268 3'utr CG13760 FlyBase G48574.1 GATGAACAAATGAACAGATGAATTGATGAACAGATGAACAGAAGTACCTGCCGTCGCCAGGTTGCCAGGTGATGAGAACGGATGATTGGAATCTGCGCTTGTGATATTAGGACTTTAGGAGGAGACCTTGTAGGGGGGGACTTCGAGTGG 241 2584171 0.985010102 27 220 1786 0.924637681 1.901730692 0.31884058 0.315352697 0.52173913 241 23 3 319 X:2584119-2584268 8 171.5 1020 FBgn0040375 102.9966667 8.843333333 13.49 1.66510243 19.39313984 12.71312083 4 4 4 0.5 dme-miR-277-3p 8mer-A1 TGCATTTA X 2617896 2617903 - X_2617896_2617903_- 0.415372339 0.447713616 0.431542978 0.022868753 Tsp3A FBtr0307159 2617756 2618435 X - 2617882 2617920 3'utr Tsp3A FlyBase G64495.1 TACTCGCTGAAATTCGATGCATTTATTTATATGTAATTC 20 2617904 0.788522122 6 17 203 0.869565217 1.301029996 0.47826087 0.15 0.260869565 20 3 0 20 X:2617882-2617920 8 Tsp3A FBtr0307159 2617756 2618435 TGCATTTA 8mer-A1 dme-miR-277-3p X - 2617822 2617920 3'utr Tsp3A FlyBase G48605.1 TACTCGCTGAAATTCGATGCATTTATTTATATGTAATTCCTTCGAAAAAAAAGCAACAAACAGTGCGCACAAATCTTGAATATCTATTCATCCAGAACC 30 2617904 0.978834267 11 24 220 0.80952381 0.929418926 0.285714286 0.333333333 0.523809524 30 5 3 34 X:2617822-2617920 8 17 1021 FBgn0040334 330.6633333 22.46333333 34.46666667 0.051411809 0.756788841 0.493230174 1 1 1 0.5 dme-miR-7-5p 6mer3-8 GTCTTC X 2695020 2695025 - X_2695020_2695025_- 0.93902842 0.933525505 0.936276963 0.003891138 CG2658 FBtr0070502|FBtr0345716 2694721|2694390 2695063|2695063 X - 2694950 2695039 3'utr CG2658 FlyBase G64508.1 AAGTCATAGCCATAGTCTTCGTACGCCACGTGCCCCTAGTCGCTCACCTTTTCGCCCGCCCCTGGCTCATGTGCGTTGAATGTAAATAAA 12 2695032 0.969947572 9 11 62 0.933333333 1.146128036 0.133333333 0.166666667 0.333333333 12 1 0 14 X:2694950-2695039 6 CG2658 FBtr0070502|FBtr0345716 2694721|2694390 2695063|2695063 GTCTTC 6mer3-8 dme-miR-7-5p X - 2694946 2695049 3'utr CG2658 FlyBase G48614.1 CTCAGATCGCAAGTCATAGCCATAGTCTTCGTACGCCACGTGCCCCTAGTCGCTCACCTTTTCGCCCGCCCCTGGCTCATGTGCGTTGAATGTAAATAAAGTTG 15 2695033 0.973421513 8 15 90 1 1.342422681 0.090909091 0.266666667 0.5 15 0 0 22 X:2694946-2695049 6 6 1022 FBgn0024992 506.2333333 20.17 30.76333333 0.011852242 0.297471492 0.195037382 7 8 7.5 0.5 dme-miR-308-3p 7mer-m1 TGTGATT X 269695 269701 - X_269695_269701_- 0.445751928 0.432106021 0.438928975 0.009649108 ewg FBtr0332978|FBtr0332976|FBtr0332977|FBtr0308209|FBtr0089441|FBtr0308208 269590|269590|269590|269609|269609|269609 273303|270568|270568|270568|270568|270568 X - 269658 269728 3'utr ewg FlyBase G63738.1 AAATTTTATTTAAAAAAAAGCGATTGTTGTGATTTTAATATAATTTTACCTTAAAATATTTGCTTGTACAT 89 269704 0.98749666 8 88 922 0.990291262 2.008600172 0.097087379 0.146067416 0.262135922 89 1 0 102 X:269658-269728 7 ewg FBtr0089441|FBtr0308208|FBtr0332977|FBtr0308209|FBtr0332976|FBtr0332978 269609|269609|269590|269609|269590|269590 270568|270568|270568|270568|270568|273303 TGTGATT 7mer-m1 dme-miR-308-3p X - 269676 269728 3'utr ewg FlyBase G48050.1 AAATTTTATTTAAAAAAAAGCGATTGTTGTGATTTTAATATAATTTTACCTTA 55 269704 0.81827912 7 53 576 0.973684211 1.86923172 0.065789474 0.254545455 0.460526316 55 2 0 74 X:269676-269728 7 71.5 1023 FBgn0005427 485.9333333 14.70333333 22.51 0.147139525 4.862842893 3.17636606 3 3 3 0.5 dme-bantam-3p 8mer-A1 TGATCTCA X 271178 271185 - X_271178_271185_- 0.550945473 0.610740662 0.580843067 0.042281591 ewg FBtr0332978|FBtr0100578|FBtr0100582 269590|268507|268507 273303|271561|271561 X - 271121 271211 intron-5'utr ewg FlyBase G63748.1 AGGATATCCCGTTTCGGTGAGCAATGTGATCTCAGTTCCCGTCTCTATGTACCAGTCGGTAATGGCCAACGTGCAGCAGATCCAGACGAAC 63 271185 0.987010927 12 61 528 0.958333333 1.838849091 0.166666667 0.142857143 0.25 63 3 0 69 X:271121-271211 8 ewg FBtr0100582|FBtr0332978|FBtr0100578 268507|269590|268507 271561|273303|271561 TGATCTCA 8mer-A1 dme-bantam-3p X - 271136 271211 intron-5'utr ewg FlyBase G48058.1 AGGATATCCCGTTTCGGTGAGCAATGTGATCTCAGTTCCCGTCTCTATGTACCAGTCGGTAATGGCCAACGTGCAG 53 271186 0.983633203 9 50 422 0.942857143 1.342422681 0.228571429 0.264150943 0.442857143 53 2 2 66 X:271136-271211 8 55 1024 FBgn0005427 485.9333333 14.70333333 22.51 0.11318425 3.740648379 2.443358507 0 1 0.5 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer2-7 TGTGAT X 2734792 2734797 - X_2734792_2734797_- 0.447959106 0.53343822 0.490698663 0.060442851 crm FBtr0070495|FBtr0070495|FBtr0070495|FBtr0070496|FBtr0070496|FBtr0070496 2734246|2734246|2734246|2734246|2734246|2734246 2735002|2735002|2735002|2735002|2735002|2735002 X - 2734715 2734817 3'utr crm FlyBase G64551.1 TATGTTTTTACGCGACTTTTTGTGATCTATACTCATTTTATGTATGCCAAGTATTAGCAAGCACTCACATTGTCTGAACATATATATTTATTTATACATTAAC 239 2734796 0.777182562 16 230 1811 0.967105263 1.62324929 0.381578947 0.217573222 0.384868421 239 4 6 294 X:2734715-2734817 6 crm FBtr0070495|FBtr0070495|FBtr0070495|FBtr0070496|FBtr0070496|FBtr0070496 2734246|2734246|2734246|2734246|2734246|2734246 2735002|2735002|2735002|2735002|2735002|2735002 TGTGAT 6mer2-7 "dme-miR-2a-3p,dme-miR-2b-3p" X - 2734779 2734816 3'utr crm FlyBase G48645.1 ATGTTTTTACGCGACTTTTTGTGATCTATACTCATTTT 108 2734796 0.648362768 10 108 942 1 2.176091259 0.806666667 0.314814815 0.506666667 108 0 0 150 X:2734779-2734816 6 115 1025 FBgn0000376 219.6566667 6.966666667 10.63 0.523544319 16.50717703 10.81843838 -1 -1 -1 0.5 dme-miR-308-3p 7mer-m1 TGTGATT X 3132826 3132832 + X_3132826_3132832_+ 0.504532028 0.512830555 0.508681292 0.005867996 kirre FBtr0309501 3132424 3134532 X + 3132812 3132855 3'utr kirre FlyBase G58507.1 AACAAAAACCGTATTGTGATTTATAGCGTTAATTATTTTATGGC 25 3132825 0.743187544 4 23 264 0.928571429 1.414973348 0 0.12 0.214285714 25 2 0 26 X:3132812-3132855 7 kirre FBtr0309501 3132424 3134532 TGTGATT 7mer-m1 dme-miR-308-3p X + 3132815 3132847 3'utr kirre FlyBase G44251.1 AAAAACCGTATTGTGATTTATAGCGTTAATTAT 17 3132832 0.611854312 4 16 162 1 1.342422681 0.136363636 0.294117647 0.454545455 17 0 0 22 X:3132815-3132847 7 20.5 1026 FBgn0028369 20.34666667 0.466666667 0.723333333 1.007536042 43.92857143 28.34101382 1 -6 -2.5 0.5 dme-bantam-3p 7mer-m8 TGATCTC X 3508783 3508789 - X_3508783_3508789_- 0.34884973 0.489462671 0.4191562 0.099428406 CG32791 FBtr0333795 3507243 3513002 X - 3508763 3508805 3'utr CG32791 FlyBase G64593.1 TTTTTAATTAATTCATTGATCTCTTCTCACAAGGTTGGTTCTC 34 3508789 0.679050608 5 33 321 0.976190476 1.612783857 0 0.205882353 0.357142857 34 1 0 41 X:3508763-3508805 7 CG32791 FBtr0333795 3507243 3513002 TGATCTC 7mer-m8 dme-bantam-3p X - 3508763 3508805 3'utr CG32791 FlyBase G48671.1 TTTTTAATTAATTCATTGATCTCTTCTCACAAGGTTGGTTCTC 15 3508789 0.645855555 5 15 142 1 1.397940009 0 0.466666667 0.68 15 0 0 25 X:3508763-3508805 7 24.5 1027 FBgn0052791 287.9933333 6.18 9.406666667 0.085071414 3.964401294 2.60453579 0 0 0 0.5 dme-miR-277-3p 8mer-A1 TGCATTTA X 3954292 3954299 + X_3954292_3954299_+ 0.513056943 0.497343502 0.505200223 0.011111052 Vap-33A FBtr0070618|FBtr0342739 3952921|3952921 3955442|3955442 X + 3954231 3954312 3'utr Vap-33A FlyBase G58735.1 CGCGGACGGCGGCTCTATATATACATATTTATATATAATCATTATTGTTTTGGTTGGCATTTGCATTTACTAAGTTTCGTTT 28 3954291 0.987945231 6 28 331 1 1.531478917 0.117647059 0.214285714 0.352941176 28 0 0 34 X:3954231-3954312 8 Vap-33A FBtr0342739|FBtr0070618 3952921|3952921 3955442|3955442 TGCATTTA 8mer-A1 dme-miR-277-3p X + 3954274 3954311 3'utr Vap-33A FlyBase G44434.1 ATTGTTTTGGTTGGCATTTGCATTTACTAAGTTTCGTT 10 3954291 0.7814271 3 10 113 1 1.113943352 0 0.3 0.461538462 10 0 0 13 X:3954274-3954311 8 17 1028 FBgn0029687 3606.676667 166.3933333 255.1133333 0.00471348 0.102167555 0.06663705 1 1 1 0.5 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA X 4105606 4105613 + X_4105606_4105613_+ 0.386053594 0.512849785 0.449451689 0.089658453 brn FBtr0070638 4105462 4105791 X + 4105551 4105634 3'utr brn FlyBase G58739.1 ATTAGGAGCAGTGGATGATACCTCAACCGTTCAGTGAGACTTTAAACCAAGCAGCTGGTGCTAATAGTGCAAGATCGCAAGAGT 25 4105615 0.974113365 6 22 132 0.888888889 1.380211242 0.148148148 0.125 0.222222222 24 3 0 24 X:4105551-4105634 8 brn FBtr0070638 4105462 4105791 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" X + 4105554 4105627 3'utr brn FlyBase G44436.1 AGGAGCAGTGGATGATACCTCAACCGTTCAGTGAGACTTTAAACCAAGCAGCTGGTGCTAATAGTGCAAGATCG 16 4105592 0.968687245 6 14 77 0.904761905 0.977723605 0.142857143 0.25 0.428571429 16 1 1 19 X:4105554-4105627 8 11 1029 FBgn0000221 55.33333333 4.63 7.023333333 0.198795181 2.375809935 1.566207879 -9 14 2.5 0.5 dme-bantam-3p 6mer3-8 TGATCT X 482668 482673 + X_482668_482673_+ 0.971136043 0.966887239 0.969011641 0.003004355 CG3176 FBtr0336920|FBtr0343501 482436|482580 482768|482768 X + 482623 482697 3'utr CG3176 FlyBase G57740.1 AAAGAATATAGAGCTATATAGTATTTAACATTAGGCAAAAATCTTTGATCTATTCTTCGTTAGCGCTGTGCGAGT 15 482667 0.985099664 9 15 127 1 1.301029996 0.1 0.333333333 0.5 15 0 0 20 X:482623-482697 6 CG3176 FBtr0336920|FBtr0343501 482436|482580 482768|482768 TGATCT 6mer3-8 dme-bantam-3p X + 482655 482706 3'utr CG3176 FlyBase G43687.1 AGGCAAAAATCTTTGATCTATTCTTCGTTAGCGCTGTGCGAGTACTGCCAGA 13 482674 0.804898776 7 11 87 0.909090909 1.301029996 0.318181818 0.538461538 0.727272727 13 2 0 20 X:482655-482706 6 9.5 1030 FBgn0029524 104.6533333 24.39 37.14333333 0.090775895 0.389503895 0.255765952 1 -6 -2.5 0.5 dme-miR-317-3p 8mer-A1 TGTGTTCA X 490671 490678 + X_490671_490678_+ 0.618950999 0.631103195 0.625027097 0.008592903 CG3156 FBtr0070079 490570 490725 X + 490633 490684 3'utr CG3156 FlyBase G57746.1 TTGGTGGTGGACCAGCTAGTGCTATTGTTACCGGGATATGTGTTCATAAATC 11 490669 0.987272938 5 11 101 1 1.079181246 0.416666667 0.090909091 0.166666667 11 0 0 12 X:490633-490684 8 CG3156 FBtr0070079 490570 490725 TGTGTTCA 8mer-A1 dme-miR-317-3p X + 490618 490682 3'utr CG3156 FlyBase G43690.1 TGGCCCCACCGCTCCTTGGTGGTGGACCAGCTAGTGCTATTGTTACCGGGATATGTGTTCATAAA 14 490670 0.983922151 9 13 103 0.9 1.255272505 0.1 0.285714286 0.5 14 2 0 18 X:490618-490682 8 10.5 1031 FBgn0023536 204 10.62666667 16.39 0.051470588 0.988080301 0.640634533 2 1 1.5 0.5 dme-miR-8-3p 6mer3-8 CAGTAT X 4927350 4927355 - X_4927350_4927355_- 0.607350948 0.617781683 0.612566316 0.007375689 CG44774 FBtr0343138|FBtr0343140|FBtr0343142|FBtr0343141|FBtr0343139|FBtr0343136|FBtr0345209|FBtr0343135|FBtr0343137 4926662|4926662|4921676|4926662|4926662|4926662|4926662|4926662|4926662 4927583|4927583|4927583|4927583|4927583|4927583|4927583|4927583|4927583 X - 4927331 4927423 3'utr CG44774 FlyBase G64808.1 AATATTTAACATTTCAAGGAACACCTTAGCCTAGACGTTACTTTAGCCTAGACTAGAGCACTGAACTACAGTATGGGCGAATGAGTCCACGCA 60 4927357 0.83351416 14 42 276 0.683544304 1.431363764 0.113924051 0.216666667 0.405063291 60 24 1 54 X:4927331-4927423 6 CG44774 FBtr0343139|FBtr0343141|FBtr0343142|FBtr0343138|FBtr0343140|FBtr0343137|FBtr0343135|FBtr0345209|FBtr0343136 4926662|4926662|4921676|4926662|4926662|4926662|4926662|4926662|4926662 4927583|4927583|4927583|4927583|4927583|4927583|4927583|4927583|4927583 CAGTAT 6mer3-8 dme-miR-8-3p X - 4927331 4927522 3'utr CG44774 FlyBase G48826.1 AGTAACCACCCTGTTACGTTTGTTATACACTAAGCTATTTAACGGCGACCGAAAGCCAAGCTCCCTTCCTTAGCCGCAGGTTCCATATCATTCAAGAGTAATATTTAACATTTCAAGGAACACCTTAGCCTAGACGTTACTTTAGCCTAGACTAGAGCACTGAACTACAGTATGGGCGAATGAGTCCACGCA 100 4927357 0.875410259 24 87 483 0.887323944 1.799340549 0.084507042 0.32 0.521126761 100 15 1 126 X:4927331-4927522 6 36.5 1032 FBgn0266000 3691.093333 67.20666667 103.37 0.009888669 0.543100883 0.353100513 2 2 2 0.5 dme-miR-252-5p 8mer-m1 GTACTTAG X 503506 503513 + X_503506_503513_+ 0.385754969 0.390109159 0.387932064 0.003078884 svr FBtr0070086|FBtr0070085|FBtr0344737|FBtr0340146 502970|502970|502970|502970 504319|504319|504319|504319 X + 503489 503549 5'utr svr FlyBase G57757.1 AAGGAAATAAGCGAATTGTACTTAGGCAATATGCAGAAATTGGCCCACTTATGGTCATCGA 12 503505 0.983825368 3 11 59 0.916666667 1.041392685 0 0 0 12 1 0 11 X:503489-503549 8 svr FBtr0070085|FBtr0344737|FBtr0340146|FBtr0070086 502970|502970|502970|502970 504319|504319|504319|504319 GTACTTAG 8mer-m1 dme-miR-252-5p X + 503479 503539 5'utr svr FlyBase G43699.1 GAAATAAATTAAGGAAATAAGCGAATTGTACTTAGGCAATATGCAGAAATTGGCCCACTTA 7 503505 0.95680301 3 6 32 1 0.954242509 0.444444444 0.142857143 0.333333333 7 0 0 9 X:503479-503539 8 6.5 1033 FBgn0004648 2059.716667 56.39666667 86.34666667 0.003155774 0.115255039 0.075277949 1 1 1 0.5 dme-miR-304-5p 7mer-A1 GAGATTA X 5069248 5069254 + X_5069248_5069254_+ 0.812178975 0.786985406 0.799582191 0.017814565 ovo FBtr0070738|FBtr0301914|FBtr0100408|FBtr0070739|FBtr0070740 5069079|5069079|5069079|5069079|5069079 5070772|5070929|5070772|5070929|5070929 X + 5069226 5069274 3'utr ovo FlyBase G58886.1 TGCGGAGGATACGGAATTATTGGAGATTATGCTTATTATGTATATTTTT 29 5069251 0.989747065 3 29 293 1 1.579783597 0.289473684 0.24137931 0.421052632 29 0 0 38 X:5069226-5069274 7 ovo FBtr0070740|FBtr0100408|FBtr0070739|FBtr0070738|FBtr0301914 5069079|5069079|5069079|5069079|5069079 5070929|5070772|5070929|5070772|5070929 GAGATTA 7mer-A1 dme-miR-304-5p X + 5069236 5069272 3'utr ovo FlyBase G44541.1 ACGGAATTATTGGAGATTATGCTTATTATGTATATTT 18 5069252 0.767705229 4 18 181 1 1.380211242 0 0.277777778 0.458333333 18 0 0 24 X:5069236-5069272 7 23.5 1034 FBgn0003028 7.666666667 0.146666667 0.23 3.065217391 160.2272727 102.173913 -3 -4 -3.5 0.5 dme-miR-8-3p 8mer-A1 CAGTATTA X 5072734 5072741 - X_5072734_5072741_- 0.624278597 0.629370168 0.626824383 0.003600305 CG32767 FBtr0331758 5071025 5077136 X - 5072729 5072776 3'utr CG32767 FlyBase G64823.1 CGTATTTATACACTATGAATGTCTAGTCGTATTTTCAGTATTATGTAA 21 5072744 0.655660895 8 20 228 0.961538462 1.397940009 0.076923077 0.142857143 0.307692308 21 1 0 25 X:5072729-5072776 8 CG32767 FBtr0331758 5071025 5077136 CAGTATTA 8mer-A1 dme-miR-8-3p X - 5072730 5072771 3'utr CG32767 FlyBase G48842.1 TTATACACTATGAATGTCTAGTCGTATTTTCAGTATTATGTA 12 5072757 0.842752395 4 9 113 0.785714286 0.740362689 0 0.166666667 0.285714286 12 2 1 11 X:5072730-5072771 8 1 1035 FBgn0052767 1383.503333 20.81666667 32.11666667 0.000722803 0.048038431 0.031136482 3 16 9.5 0.5 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 5072749 5072755 - X_5072749_5072755_- 0.380638663 0.599501305 0.490069984 0.154759229 CG32767 FBtr0331758 5071025 5077136 X - 5072729 5072776 3'utr CG32767 FlyBase G64823.1 CGTATTTATACACTATGAATGTCTAGTCGTATTTTCAGTATTATGTAA 21 5072744 0.655660895 8 20 228 0.961538462 1.397940009 0.076923077 0.142857143 0.307692308 21 1 0 25 X:5072729-5072776 7 CG32767 FBtr0331758 5071025 5077136 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X - 5072730 5072771 3'utr CG32767 FlyBase G48842.1 TTATACACTATGAATGTCTAGTCGTATTTTCAGTATTATGTA 12 5072757 0.842752395 4 9 113 0.785714286 0.740362689 0 0.166666667 0.285714286 12 2 1 11 X:5072730-5072771 7 6.5 1036 FBgn0052767 1383.503333 20.81666667 32.11666667 0.004698218 0.3122498 0.20238713 -11 2 -4.5 0.5 dme-bantam-3p 7mer-m8 TGATCTC X 5075689 5075695 - X_5075689_5075695_- 0.422424036 0.428273233 0.425348634 0.004136009 CG32767 FBtr0331757|FBtr0302118|FBtr0302119|FBtr0300995|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 X - 5075544 5075720 3'utr CG32767 FlyBase G64829.1 AATTTTAGTTGTATAGTTTTGCATTTGATCTCTCGGCTTTAGTTTTTGCATTCAAAGCGAAAGAAAATTCAGTTCCTGTGTAATTGCAAAGATAACTTGAGAAATTGTATTATAATTTAATGGACTAGGCAATCAATGTGCTGCTTTCATGCGGAAAGATATGCATATATGTATGAA 302 5075696 0.987367697 35 289 3392 0.959128065 1.944482672 0.108991826 0.185430464 0.329700272 302 12 3 352 X:5075544-5075720 7 CG32767 FBtr0300995|FBtr0302119|FBtr0302118|FBtr0331757|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 TGATCTC 7mer-m8 dme-bantam-3p X - 5075671 5075720 3'utr CG32767 FlyBase G48849.1 AATTTTAGTTGTATAGTTTTGCATTTGATCTCTCGGCTTTAGTTTTTGCA 181 5075696 0.708418765 13 173 2079 0.96 2.421603927 0.101818182 0.397790055 0.603636364 181 11 0 264 X:5075671-5075720 7 219.5 1037 FBgn0052767 1383.503333 20.81666667 32.11666667 0.158655201 10.54443555 6.834457706 1 1 1 0.5 dme-miR-1003-3p 6mer3-8 ATGTGA X 5075844 5075849 - X_5075844_5075849_- 0.953782109 0.869352854 0.911567481 0.05970046 CG32767 FBtr0331757|FBtr0302118|FBtr0302119|FBtr0300995|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 X - 5075834 5075897 3'utr CG32767 FlyBase G64831.1 TAGTGTAAAAAAAAAAATGAAGAAAATCTCAAATGAACTTGTAACTTGATGTGAAACACGAATT 15 5075851 0.970654228 6 14 82 1 1.255272505 0.166666667 0.2 0.333333333 15 0 0 18 X:5075834-5075897 6 CG32767 FBtr0300995|FBtr0302119|FBtr0302118|FBtr0331757|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 ATGTGA 6mer3-8 dme-miR-1003-3p X - 5075830 5075865 3'utr CG32767 FlyBase G48851.1 ATGAACTTGTAACTTGATGTGAAACACGAATTGTTT 9 5075849 0.991305702 5 6 57 0.727272727 0.602059991 0.090909091 0.222222222 0.363636364 9 2 1 8 X:5075830-5075865 6 8 1038 FBgn0052767 1383.503333 20.81666667 32.11666667 0.005782422 0.384307446 0.249091853 2 0 1 0.5 dme-bantam-3p 6mer3-8 TGATCT X 5075934 5075939 - X_5075934_5075939_- 0.75455036 0.77976016 0.76715526 0.017826021 CG32767 FBtr0331757|FBtr0302118|FBtr0302119|FBtr0300995|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 X - 5075922 5075978 3'utr CG32767 FlyBase G64832.1 TGCTCTCGTGCCCTCTCTGTCACTGTCCCCATCTCACTCTGATCTGTTTATAAGAAG 42 5075940 0.789367719 10 39 418 0.931818182 1.311753861 0.181818182 0.047619048 0.090909091 42 2 1 41 X:5075922-5075978 6 CG32767 FBtr0300995|FBtr0302119|FBtr0302118|FBtr0331757|FBtr0331758 5074993|5074993|5074993|5074993|5071025 5077136|5077136|5077136|5077136|5077136 TGATCT 6mer3-8 dme-bantam-3p X - 5075925 5075956 3'utr CG32767 FlyBase G48852.1 CTGTCCCCATCTCACTCTGATCTGTTTATAAG 12 5075939 0.763357932 4 12 116 1 1.204119983 0 0.25 0.4375 12 0 0 16 X:5075925-5075956 6 24 1039 FBgn0052767 1383.503333 20.81666667 32.11666667 0.017347266 1.152922338 0.747275558 1 0 0.5 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 514231 514236 - X_514231_514236_- 0.916163238 0.998893458 0.957528348 0.058499156 elav FBtr0307173|FBtr0307173|FBtr0307173 509233|509233|509233 517791|517791|517791 X - 514210 514247 3'utr elav FlyBase G63822.1 ACTGCAAACTCCTGTGAATTCTATCGAATGAATATTTA 17 514229 0.629703102 5 16 112 0.958333333 1.361727836 0.041666667 0.294117647 0.5 17 1 0 23 X:514210-514247 6 elav FBtr0307173|FBtr0307173|FBtr0307173 509233|509233|509233 517791|517791|517791 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X - 514211 514288 3'utr elav FlyBase G48111.1 TTTAGTTGATATTCTAGCTATATACGATCTGTGCGTATGTTACTGCAAACTCCTGTGAATTCTATCGAATGAATATTT 13 514238 0.982575278 6 12 97 0.894736842 0.753327667 0.263157895 0.384615385 0.578947368 13 0 2 17 X:514211-514288 6 13.5 1040 FBgn0260400 1799.413333 52.41 80.75 0.007502445 0.25758443 0.167182663 -7 2 -2.5 0.5 "dme-miR-9b-5p,dme-miR-9c-5p" 7mer-A1 CCAAAGA X 515404 515410 - X_515404_515410_- 0.716559601 0.694330236 0.705444919 0.015718559 elav FBtr0307173 509233 517791 X - 515397 515433 3'utr elav FlyBase G63829.1 AGAAGCCGCCTGCTCTTCCCTTTCCAAAGATTTACCC 23 515412 0.78318523 3 23 194 1 1.397940009 0.12 0.086956522 0.16 23 0 0 25 X:515397-515433 7 elav FBtr0307173 509233 517791 CCAAAGA 7mer-A1 "dme-miR-9b-5p,dme-miR-9c-5p" X - 515397 515489 3'utr elav FlyBase G48116.1 TCAAAACCAAAAGAACTATGGCAATTTCTAGCTAATAAAATGATTGAATGATTGATAGAAGCCGCCTGCTCTTCCCTTTCCAAAGATTTACCC 20 515412 0.980244575 7 20 145 1 1.491361694 0.064516129 0.4 0.612903226 20 0 0 31 X:515397-515489 7 17 1041 FBgn0260400 1799.413333 52.41 80.75 0.009447524 0.324365579 0.210526316 2 2 2 0.5 dme-miR-308-3p 7mer-m1 TGTGATT X 5327209 5327215 - X_5327209_5327215_- 0.371941082 0.424604617 0.39827285 0.037238718 CG3309 FBtr0344827|FBtr0070798 5326673|5326673 5327305|5327305 X - 5327190 5327239 3'utr CG3309 FlyBase G64868.1 CTGTCTGCTAGTATCCTGTGATTGTGTGATTGTGCCTGGCGGTGCTCTTT 51 5327209 0.639092411 13 51 475 1 1.785329835 0.229508197 0.196078431 0.327868852 51 0 0 61 X:5327190-5327239 7 CG3309 FBtr0344827|FBtr0070798 5326673|5326673 5327305|5327305 TGTGATT 7mer-m1 dme-miR-308-3p X - 5327160 5327239 3'utr CG3309 FlyBase G48878.1 CTGTCTGCTAGTATCCTGTGATTGTGTGATTGTGCCTGGCGGTGCTCTTTATCAGTGTAAATAGATTTTAATCGGCGATT 47 5327209 0.990501456 13 43 443 0.914285714 1.10720997 0.285714286 0.382978723 0.585714286 47 2 4 64 X:5327160-5327239 7 47 1042 FBgn0029756 52.66666667 2.41 3.66 0.892405063 19.50207469 12.84153005 -6 -6 -6 0.5 dme-miR-999-3p 6mer3-8 AGTTAA X 5426559 5426564 + X_5426559_5426564_+ 0.968107402 0.540832432 0.754469917 0.30212905 CG4165 FBtr0070775|FBtr0340461|FBtr0070773|FBtr0340462|FBtr0070772 5426346|5426346|5426346|5426346|5426346 5426906|5426906|5426906|5427219|5426906 X + 5426542 5426615 3'utr CG4165 FlyBase G58932.1 TGGAACAAGCTTTAGTTAGTTAAATGATGCAAAGGAGTAGACACACGCACTCATGTTAAATTGTAGTTCTCAGG 15 5426566 0.986378326 10 11 92 0.722222222 0.812913357 0.333333333 0.133333333 0.277777778 15 4 1 13 X:5426542-5426615 6 CG4165 FBtr0340462|FBtr0070772|FBtr0340461|FBtr0070773|FBtr0070775 5426346|5426346|5426346|5426346|5426346 5427219|5426906|5426906|5426906|5426906 AGTTAA 6mer3-8 dme-miR-999-3p X + 5426536 5426584 3'utr CG4165 FlyBase G44572.1 TTTTTTTGGAACAAGCTTTAGTTAGTTAAATGATGCAAAGGAGTAGACA 6 5426561 0.977929237 6 6 42 1 1 0.1 0.5 0.7 6 0 0 10 X:5426536-5426584 6 7.5 1043 FBgn0029763 634.33 17.08666667 26.07333333 0.011823499 0.438938744 0.287650217 -7 -2 -4.5 0.5 dme-miR-1006-3p 7mer-A1 GAATTTA X 5719877 5719883 - X_5719877_5719883_- 0.576840419 0.363246488 0.470043454 0.151033695 CG32758 FBtr0340670|FBtr0339525 5719372|5719734 5721627|5721627 X - 5719831 5719911 3'utr CG32758 FlyBase G64932.1 ATGTTTAGTTATAGTCCTATGATAATGTGAATTTACAATTATGTTTATTATTATTACTCTCTCGTTTTCCTTCTTATTTTT 14 5719880 0.993816392 8 13 157 0.941176471 1.204119983 0.294117647 0.142857143 0.294117647 14 1 0 16 X:5719831-5719911 7 CG32758 FBtr0339525|FBtr0340670 5719734|5719372 5721627|5721627 GAATTTA 7mer-A1 dme-miR-1006-3p X - 5719871 5719911 3'utr CG32758 FlyBase G48933.1 ATGTTTAGTTATAGTCCTATGATAATGTGAATTTACAATTA 7 5719889 0.756177915 5 7 84 1 0.954242509 0.333333333 0.285714286 0.444444444 7 0 0 9 X:5719871-5719911 7 9 1044 FBgn0052758 1999.443333 76.95666667 118.6333333 0.004501253 0.116948932 0.075864007 -3 6 1.5 0.5 dme-miR-283-5p 8mer-m1 TGATATTT X 5720040 5720047 - X_5720040_5720047_- 0.503216342 0.460097935 0.481657139 0.030489313 CG32758 FBtr0340670|FBtr0339525 5719372|5719734 5721627|5721627 X - 5720011 5720102 3'utr CG32758 FlyBase G64934.1 TTATAGAATGGCATATAGGCATACATTTATCAACGATGCAAGTGACGTCTGCTTGTGATATTTACAATTTACACGATTATTATGATTAATTT 171 5720050 0.848181391 16 160 1547 0.944186047 1.462397998 0.269767442 0.187134503 0.353488372 171 6 6 203 X:5720011-5720102 8 CG32758 FBtr0339525|FBtr0340670 5719734|5719372 5721627|5721627 TGATATTT 8mer-m1 dme-miR-283-5p X - 5720028 5720096 3'utr CG32758 FlyBase G48935.1 AATGGCATATAGGCATACATTTATCAACGATGCAAGTGACGTCTGCTTGTGATATTTACAATTTACACG 129 5720051 0.988979668 11 118 1168 0.878947368 1.377618431 0.273684211 0.317829457 0.536842105 129 17 6 167 X:5720028-5720096 8 141.5 1045 FBgn0052758 1999.443333 76.95666667 118.6333333 0.070769698 1.838697102 1.192750773 3 4 3.5 0.5 dme-miR-317-3p 7mer-m8 TGTGTTC X 5873919 5873925 - X_5873919_5873925_- 0.651353468 0.628865153 0.640109311 0.015901629 mof FBtr0070829 5873838 5874268 X - 5873868 5874046 3'utr mof FlyBase G64986.1 TTAAGGAGTTTTACGGATAGGCTGTTGTAACTCTTAATGATAGAACCAAATGTCTAATTCGTTTGGCTAATGTTTTTGGAGAGGGAATTTGGAACAACCATTTAAAAATTTTAAAAACTTCTGTGTTCTTGAAATATATATCTTTAACTACTTTATCTCGAAAAACTCTGGACTTGTTA 90 5873918 0.988649972 22 85 805 0.954545455 1.544068044 0.081818182 0.2 0.345454545 90 3 2 105 X:5873868-5874046 7 mof FBtr0070829 5873838 5874268 TGTGTTC 7mer-m8 dme-miR-317-3p X - 5873899 5873973 3'utr mof FlyBase G48975.1 TTTTGGAGAGGGAATTTGGAACAACCATTTAAAAATTTTAAAAACTTCTGTGTTCTTGAAATATATATCTTTAAC 50 5873927 0.799905759 12 46 445 0.892307692 1.763427994 0.015384615 0.26 0.430769231 50 7 0 58 X:5873899-5873973 7 51 1046 FBgn0014340 384.9966667 15.43 23.56333333 0.132468679 3.305249514 2.164379686 -7 2 -2.5 0.5 dme-miR-33-5p 7mer-A1 AATGCAA X 5910857 5910863 + X_5910857_5910863_+ 0.600643018 0.684965582 0.6428043 0.059625082 CG12236 FBtr0070826 5910640 5911789 X + 5910826 5910876 3'utr CG12236 FlyBase G59019.1 AAAACGAAAACTAGCCAAATTTGTCAACTTAAATGCAAAGCAGATAGGAGT 14 5910855 0.952703307 5 12 81 0.857142857 1.079181246 0.214285714 0 0 14 2 0 12 X:5910826-5910876 7 CG12236 FBtr0070826 5910640 5911789 AATGCAA 7mer-A1 dme-miR-33-5p X + 5910827 5910875 3'utr CG12236 FlyBase G44650.1 AAACGAAAACTAGCCAAATTTGTCAACTTAAATGCAAAGCAGATAGGAG 7 5910855 0.891859222 3 6 35 0.769230769 1 0.076923077 0.428571429 0.692307692 7 3 0 10 X:5910827-5910875 7 8 1047 FBgn0029822 534.9233333 22.61666667 34.62 0.014955414 0.353721444 0.2310803 2 2 2 0.5 dme-miR-283-5p 8mer-A1 TGATATTA X 5911354 5911361 + X_5911354_5911361_+ 0.468060155 0.474657412 0.471358784 0.004664925 CG12236 FBtr0070826 5910640 5911789 X + 5911290 5911360 3'utr CG12236 FlyBase G59023.1 CTTAGCCCATATCGATCACTTTATTTTAGCTCTTAAACAACCTCATATGTATTTTTTGAAACTCTGATATT 16 5911333 0.991304349 9 15 163 0.941176471 0.903089987 0.058823529 0.0625 0.117647059 16 0 1 16 X:5911290-5911360 7 CG12236 FBtr0070826 5910640 5911789 TGATATTA 8mer-A1 dme-miR-283-5p X + 5911307 5911434 3'utr CG12236 FlyBase G44654.1 ACTTTATTTTAGCTCTTAAACAACCTCATATGTATTTTTTGAAACTCTGATATTATTCAGTTTTTGTATATAGAGCTAGGCAACTTAACCTAAATTAAGGTAAACCCAAAAACAAAGTCCCCCCTCCA 17 5911334 0.986087962 11 16 140 1 1.322219295 0.285714286 0.235294118 0.380952381 17 0 0 21 X:5911307-5911434 8 1.5 1048 FBgn0029822 534.9233333 22.61666667 34.62 0.00280414 0.066322771 0.043327556 21 20 20.5 0.5 dme-miR-932-5p 6mer3-8 GGAATT X 5913105 5913110 - X_5913105_5913110_- 0.953613013 0.814882724 0.884247869 0.098097136 CG3011 FBtr0290235|FBtr0070827|FBtr0345317 5913065|5913065|5913065 5913196|5913196|5913196 X - 5913074 5913130 3'utr CG3011 FlyBase G65006.1 GCTTGTTAATATCATAAGTGGGAATTAGTAGTTAAGCCATTAAACGCATTTCAGTTT 17 5913116 0.989521122 6 15 147 0.9 0.954242509 0.3 0.117647059 0.25 17 1 1 18 X:5913074-5913130 6 CG3011 FBtr0070827|FBtr0345317|FBtr0290235 5913065|5913065|5913065 5913196|5913196|5913196 GGAATT 6mer3-8 dme-miR-932-5p X - 5913075 5913148 3'utr CG3011 FlyBase G48988.1 TACATCCTCGAAAAGTCCGCTTGTTAATATCATAAGTGGGAATTAGTAGTTAAGCCATTAAACGCATTTCAGTT 15 5913116 0.980095211 10 15 110 1 1.342422681 0 0.466666667 0.636363636 15 0 0 22 X:5913075-5913148 6 13 1049 FBgn0029823 724.9866667 47.58333333 72.74 0.017931364 0.273204904 0.178718724 6 6 6 0.5 "dme-miR-995-3p,dme-miR-998-3p" 8mer-A1 TGGTGCTA X 5944411 5944418 + X_5944411_5944418_+ 0.55964887 0.607250498 0.583449684 0.033659414 CG12728 FBtr0343052 5944386 5945250 X + 5944260 5944448 stop_codon CG12728 FlyBase G59047.1 AGTCCGATCAGAATTGGGATTTAATTCTTCGAACTGTGCTGGAAGATATCAAAGCCGTACTGATTTACTCAACTGAACGCATCGAAAAAGCGATCCAGAGCTATATCAATAAGTTAGCGCAAAAATAATTTGGAAACGATCTCATTCTAAATGGTGCTACAAGCAAAACTTCACACTTAGTACATACGT 213 5944410 0.982954048 25 191 1452 0.911290323 1.655138435 0.177419355 0.14084507 0.262096774 213 18 4 226 X:5944260-5944448 8 CG12728 FBtr0070859|FBtr0343052 5944386|5944386 5944622|5945250 TGGTGCTA 8mer-A1 "dme-miR-995-3p,dme-miR-998-3p" X + 5944287 5944441 stop_codon CG12728 FlyBase G44671.1 TTCGAACTGTGCTGGAAGATATCAAAGCCGTACTGATTTACTCAACTGAACGCATCGAAAAAGCGATCCAGAGCTATATCAATAAGTTAGCGCAAAAATAATTTGGAAACGATCTCATTCTAAATGGTGCTACAAGCAAAACTTCACACTTAGTA 125 5944410 0.855694508 20 113 848 0.920903955 1.367089564 0.169491525 0.304 0.508474576 125 8 6 163 X:5944287-5944441 8 76 1050 FBgn0029825 316.1666667 16.35666667 25.15 0.240379547 4.646423477 3.021868787 1 1 1 0.5 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer3-8 ACCAAA X 5947639 5947644 + X_5947639_5947644_+ 0.557544337 0.484877309 0.521210823 0.051383328 CG32756 FBtr0070860|FBtr0343295 5947414|5947414 5947851|5948353 X + 5947590 5947663 3'utr CG32756 FlyBase G59067.1 AAATGAAACAAAACAATGTATAGTGTTGTAGATTTTAAAACGACATCTTACCAAAACACCCTCAGTACACAAAC 36 5947638 0.952006227 9 34 152 0.974358974 1.579783597 0.051282051 0.083333333 0.153846154 36 1 0 38 X:5947590-5947663 6 CG32756 FBtr0343295|FBtr0070860 5947414|5947414 5948353|5947851 ACCAAA 6mer3-8 "dme-miR-9b-5p,dme-miR-9c-5p" X + 5947627 5947663 3'utr CG32756 FlyBase G44689.1 AAACGACATCTTACCAAAACACCCTCAGTACACAAAC 21 5947638 0.702096727 3 19 63 0.942857143 1.51851394 0.028571429 0.476190476 0.685714286 21 2 0 33 X:5947627-5947663 6 25 1051 FBgn0052756 250.4866667 13.61 20.71333333 0.099805712 1.836884644 1.206952044 1 1 1 0.5 dme-miR-34-5p 8mer-A1 CACTGCCA X 6233806 6233813 + X_6233806_6233813_+ 0.621163041 0.619041491 0.620102266 0.001500127 CG14446 FBtr0339696|FBtr0307164 6231056|6231056 6236218|6236004 X + 6233783 6234107 3'utr CG14446 FlyBase G59096.1 CACACACACTCTCAGTCGAGCTGCACTGCCATTGGTGAAAGTGAAAATGAGATTTAGGCCTATTGAAGCTTCCAGCATTTACCAGTGCCATAACTTTATAACTTTATATAACTTTACCCGCACGCCCAGCCCAGCCCAGTATGCCGATCAATCCGATCGATTGATCTCGGCTAGCATCGAGCTTAGCACTAGCTTTCTTCCGAGCTTGCTTGTTGGACAGACAGTGAGAACGAACGAAGAGACATCAGCCTCCATCCATTAAAGAACTTAGTCTTAGCCGATCTGGAGTCCAAAATTTCATTGGAAATTCCGCCATGCGGATCGG 125 6233814 0.97123952 35 119 742 0.95483871 1.86923172 0.367741935 0.2 0.35483871 125 6 1 148 X:6233783-6234107 8 CG14446 FBtr0307164|FBtr0339696 6231056|6231056 6236004|6236218 CACTGCCA 8mer-A1 dme-miR-34-5p X + 6233761 6233894 3'utr CG14446 FlyBase G44711.1 ATCGAAACATACACCAACACACCACACACACTCTCAGTCGAGCTGCACTGCCATTGGTGAAAGTGAAAATGAGATTTAGGCCTATTGAAGCTTCCAGCATTTACCAGTGCCATAACTTTATAACTTTATATAAC 44 6233814 0.971073238 12 42 245 0.948051948 1.86332286 0.480519481 0.454545455 0.688311688 44 4 0 73 X:6233761-6233894 8 34 1052 FBgn0262730 931.1666667 14.78666667 22.41333333 0.036513335 2.299368801 1.516954194 -8 -8 -8 0.5 "dme-miR-996-3p,dme-miR-279-3p" 8mer-A1 TCTAGTCA X 6234381 6234388 + X_6234381_6234388_+ 0.624881715 0.621719074 0.623300395 0.002236296 CG14446 FBtr0339696|FBtr0307164 6231056|6231056 6236218|6236004 X + 6234332 6234424 3'utr CG14446 FlyBase G59098.1 TATTGTTTAGCATGTTTCGACTGCAATTTAAGCCGAATTTTAGATCTTCTCTAGTCAGTTCAAAGCGTTTTTTGTTCGTTTTGTCACGCCCAT 71 6234380 0.986109137 16 62 598 0.894117647 1.579783597 0.164705882 0.183098592 0.317647059 71 8 1 76 X:6234332-6234424 8 CG14446 FBtr0307164|FBtr0339696 6231056|6231056 6236004|6236218 TCTAGTCA 8mer-A1 "dme-miR-996-3p,dme-miR-279-3p" X + 6234328 6234400 3'utr CG14446 FlyBase G44714.1 ACATTATTGTTTAGCATGTTTCGACTGCAATTTAAGCCGAATTTTAGATCTTCTCTAGTCAGTTCAAAGCGTT 47 6234380 0.989183898 12 41 394 0.904109589 1.217483944 0.191780822 0.446808511 0.643835616 47 4 3 66 X:6234328-6234400 8 53 1053 FBgn0262730 931.1666667 14.78666667 22.41333333 0.056917845 3.584310189 2.364663891 1 1 1 0.5 dme-miR-7-5p 7mer-A1 TCTTCCA X 6537461 6537467 + X_6537461_6537467_+ 0.652001749 0.763624408 0.707813078 0.078929168 dx FBtr0070914 6537377 6538575 X + 6537437 6537546 3'utr dx FlyBase G59218.1 CCACCGAAGTCCCCTCGATCATTCTCTTCCATTCGTCGTTAAGTTACTTTCTACATAATCTCAGTGTGTGTGCAATCCTCGTTTACTATGATATATTTTTTTTATAGATA 147 6537458 0.79244303 21 133 1425 0.901734104 1.716003344 0.248554913 0.136054422 0.265895954 147 15 2 156 X:6537437-6537546 7 dx FBtr0070914 6537377 6538575 TCTTCCA 7mer-A1 dme-miR-7-5p X + 6537441 6537534 3'utr dx FlyBase G44802.1 CGAAGTCCCCTCGATCATTCTCTTCCATTCGTCGTTAAGTTACTTTCTACATAATCTCAGTGTGTGTGCAATCCTCGTTTACTATGATATATTT 52 6537458 0.765246965 11 44 499 0.864864865 1.204119983 0.135135135 0.307692308 0.513513514 52 7 3 64 X:6537441-6537534 7 43.5 1054 FBgn0000524 299.9366667 9.43 14.42 0.145030618 4.612937434 3.016643551 3 3 3 0.5 dme-miR-79-3p 6mer3-8 TAGCTT X 6537608 6537613 + X_6537608_6537613_+ 0.759786111 0.866257732 0.813021921 0.07528679 dx FBtr0070914 6537377 6538575 X + 6537583 6537635 3'utr dx FlyBase G59219.1 CAACAGCAAACCACAATTGCAATTGTAGCTTCCTTTCCGCTCTTCCAATTCGT 22 6537601 0.983738085 9 22 171 1 1.447158031 0 0.272727273 0.428571429 22 0 0 28 X:6537583-6537635 6 dx FBtr0070914 6537377 6538575 TAGCTT 6mer3-8 dme-miR-79-3p X + 6537588 6537641 3'utr dx FlyBase G44804.1 GCAAACCACAATTGCAATTGTAGCTTCCTTTCCGCTCTTCCAATTCGTATTTGT 12 6537616 0.942894823 9 11 97 0.95 1.278753601 0 0.583333333 0.75 12 1 0 19 X:6537588-6537641 6 14.5 1055 FBgn0000524 299.9366667 9.43 14.42 0.048343539 1.537645811 1.00554785 7 -8 -0.5 0.5 dme-miR-11-3p 7mer-m1 TGTGATG X 6669798 6669804 - X_6669798_6669804_- 0.44821944 0.535064094 0.491641767 0.061408476 CG3198 FBtr0070991 6668537 6671982 X - 6669789 6669918 3'utr CG3198 FlyBase G65217.2 ATGTATGTTCATGTTCCCCCCTCCTCTTCACCAACAGGTAAATTGCGACTGAACCCGACCCCATAAAAATTATGATACTGATATTTGATATCGATCTCGATTAAATCGAATTTTTGTGATGTGACGAGAT 54 6669805 0.971146207 19 49 371 0.933333333 1.146128036 0.15 0.111111111 0.2 54 1 3 56 X:6669789-6669918 7 CG3198 FBtr0070991 6668537 6671982 TGTGATG 7mer-m1 dme-miR-11-3p X - 6669789 6669914 3'utr CG3198 FlyBase G49132.1 ATGTTCATGTTCCCCCCTCCTCTTCACCAACAGGTAAATTGCGACTGAACCCGACCCCATAAAAATTATGATACTGATATTTGATATCGATCTCGATTAAATCGAATTTTTGTGATGTGACGAGAT 33 6669806 0.80084011 14 32 231 0.941176471 1.079181246 0.176470588 0.393939394 0.607843137 33 0 3 48 X:6669789-6669914 7 19.5 1056 FBgn0029887 782.61 18.86666667 28.88333333 0.024916625 1.033568905 0.675129833 1 2 1.5 0.5 dme-miR-304-5p 6mer3-8 TGAGAT X 6781828 6781833 - X_6781828_6781833_- 0.412292756 0.46576966 0.439031208 0.037813879 C3G FBtr0300526|FBtr0334967|FBtr0299794|FBtr0299793|FBtr0334968|FBtr0340087|FBtr0299791|FBtr0299795|FBtr0299792|FBtr0334969 6781414|6781414|6781414|6781414|6781414|6780788|6780788|6781414|6781414|6781414 6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353 X - 6781806 6781858 3'utr C3G FlyBase G65276.1 AAATCAGCAATTTTCGCTTTTGTTTTGAGATCTCTTTTTTACACAAGAACACA 26 6781824 0.979570102 9 24 340 0.931034483 1.431363764 0.413793103 0.115384615 0.206896552 26 2 0 27 X:6781806-6781858 6 C3G FBtr0299792|FBtr0334969|FBtr0299791|FBtr0299795|FBtr0334968|FBtr0340087|FBtr0300526|FBtr0334967|FBtr0299794|FBtr0299793 6781414|6781414|6780788|6781414|6781414|6780788|6781414|6781414|6781414|6781414 6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353|6782353 TGAGAT 6mer3-8 dme-miR-304-5p X - 6781815 6781847 3'utr C3G FlyBase G49172.1 TTTCGCTTTTGTTTTGAGATCTCTTTTTTACAC 22 6781823 0.624662568 9 21 307 0.972222222 1.544068044 0.583333333 0.409090909 0.638888889 22 1 0 35 X:6781815-6781847 6 22 1057 FBgn0259228 1638.55 32.65333333 50.12 0.013426505 0.673744385 0.438946528 -9 -10 -9.5 0.5 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 6812373 6812379 + X_6812373_6812379_+ 0.655071498 0.649718868 0.652395183 0.00378486 pod1 FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228|FBtr0112956|FBtr0070964|FBtr0070966 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813830|6813830|6813830|6813830|6813520|6813830|6813830 X + 6812358 6812404 3'utr pod1 FlyBase G59409.2 ACCCCCACCATTGTTTCTAGTCTTTCGCATCGTTCGATCCCCCAAAT 90 6812380 0.790910513 10 61 825 0.673267327 1.230448921 0.108910891 0.122222222 0.217821782 90 30 3 68 X:6812358-6812404 7 pod1 FBtr0112956|FBtr0070964|FBtr0070966|FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813520|6813830|6813830|6813830|6813830|6813830|6813830 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X + 6812359 6812403 3'utr pod1 FlyBase G44937.2 CCCCCACCATTGTTTCTAGTCTTTCGCATCGTTCGATCCCCCAAA 91 6812380 0.630473063 8 45 765 0.510948905 0.942008053 0.03649635 0.395604396 0.598540146 91 60 7 70 X:6812359-6812403 7 82.5 1058 FBgn0029903 1544.65 31.03666667 47.70666667 0.053410158 2.658146279 1.729318055 -7 -7 -7 0.5 dme-miR-14-3p 6mer2-7 AGACTG X 6812467 6812472 + X_6812467_6812472_+ 0.774179029 0.941149108 0.857664069 0.11806569 pod1 FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228|FBtr0112956|FBtr0070964|FBtr0070966 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813830|6813830|6813830|6813830|6813520|6813830|6813830 X + 6812446 6812488 3'utr pod1 FlyBase G59410.1 AGACAGGAAACAAAAACATATAGACTGTAGCCAAACGAAAAAT 99 6812466 0.900310695 3 98 295 0.991869919 1.785329835 0.097560976 0.222222222 0.37398374 99 0 1 122 X:6812446-6812488 6 pod1 FBtr0112956|FBtr0070964|FBtr0070966|FBtr0070965|FBtr0070968|FBtr0070967|FBtr0308228 6811571|6811571|6811571|6811571|6811571|6811571|6811571 6813520|6813830|6813830|6813830|6813830|6813830|6813830 AGACTG 6mer2-7 dme-miR-14-3p X + 6812450 6812488 3'utr pod1 FlyBase G44938.1 AGGAAACAAAAACATATAGACTGTAGCCAAACGAAAAAT 71 6812466 0.889506262 3 69 215 0.979166667 1.496006599 0.104166667 0.253521127 0.447916667 71 0 2 94 X:6812450-6812488 6 84.5 1059 FBgn0029903 1544.65 31.03666667 47.70666667 0.054704949 2.722586188 1.771240917 1 1 1 0.5 dme-miR-277-3p 8mer-A1 TGCATTTA X 6851746 6851753 + X_6851746_6851753_+ 0.593289949 0.488664869 0.540977409 0.073981047 CG4558 FBtr0070995|FBtr0300177 6851128|6851390 6851884|6851884 X + 6851685 6851839 3'utr CG4558 FlyBase G59445.1 CAGTTAACAGTTAGCTCCTGGCAGCCGCGCTTCATCCTTGTGTTCGTCGTTCTAACCATTTTGCATTTAAAACTCTCGACTCTACGTTCTGTTCACACCAACTAGCGTAGCCAACGGAAAGCGATTTTGTAAATATCCATTGCCAGACTTGAGTT 94 6851745 0.986301179 14 91 781 0.981481481 2.025305865 0.064814815 0.138297872 0.25 94 2 0 106 X:6851685-6851839 8 CG4558 FBtr0070995|FBtr0300177 6851128|6851390 6851884|6851884 TGCATTTA 8mer-A1 dme-miR-277-3p X + 6851688 6851814 3'utr CG4558 FlyBase G44966.1 TTAACAGTTAGCTCCTGGCAGCCGCGCTTCATCCTTGTGTTCGTCGTTCTAACCATTTTGCATTTAAAACTCTCGACTCTACGTTCTGTTCACACCAACTAGCGTAGCCAACGGAAAGCGATTTTGT 39 6851722 0.987748038 8 37 331 0.943396226 1.22184875 0.169811321 0.230769231 0.433962264 39 1 2 50 X:6851688-6851814 8 26 1060 FBgn0029914 220.6666667 13.97333333 21.30666667 0.117824773 1.860687023 1.220275344 1 24 12.5 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 6851938 6851943 - X_6851938_6851943_- 0.67896955 0.714542124 0.696755837 0.025153627 CG14434 FBtr0345899|FBtr0345899|FBtr0345899|FBtr0343322|FBtr0343322|FBtr0343322|FBtr0071040|FBtr0071040|FBtr0071040 6851907|6851907|6851907|6851907|6851907|6851907|6851907|6851907|6851907 6852045|6852045|6852045|6852045|6852045|6852045|6852045|6852045|6852045 X - 6851926 6851955 3'utr CG14434 FlyBase G65314.1 CCATAAAACATTCTGTGAGGCAAACAAAAA 5 6851942 0.908657898 3 5 17 1 0.903089987 0 0.6 0.75 5 0 0 8 X:6851926-6851955 6 CG14434 FBtr0071040|FBtr0071040|FBtr0071040|FBtr0343322|FBtr0343322|FBtr0343322|FBtr0345899|FBtr0345899|FBtr0345899 6851907|6851907|6851907|6851907|6851907|6851907|6851907|6851907|6851907 6852045|6852045|6852045|6852045|6852045|6852045|6852045|6852045|6852045 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X - 6851927 6851962 3'utr CG14434 FlyBase G49195.1 TTGTTATCCATAAAACATTCTGTGAGGCAAACAAAA 10 6851942 0.95233215 3 8 41 0.875 1.146128036 0 0.4 0.625 10 2 0 14 X:6851927-6851962 6 7.5 1061 FBgn0029915 147.6666667 23.04333333 35.10666667 0.050790068 0.325473745 0.213634637 -1 -1 -1 0.5 dme-bantam-3p 6mer2-7 GATCTC X 6879019 6879024 + X_6879019_6879024_+ 0.502110048 0.910038109 0.706074078 0.288448726 CG43736 FBtr0345898|FBtr0330265|FBtr0330263|FBtr0330268|FBtr0330264 6878698|6878698|6878698|6878698|6878698 6881580|6880502|6880429|6881580|6880095 X + 6878965 6879061 3'utr CG43736 FlyBase G59476.1 CGCCACCGCCAGCTCCGGCAGTTCCAGCCACACCACCCGGAGCGGGAACCATTGGATCTCCTGCACTATCAGCAACACCTGTACACACCACCAGCAA 53 6879017 0.952118737 7 51 225 0.966666667 1.462397998 0.266666667 0.113207547 0.216666667 53 1 1 58 X:6878965-6879061 6 CG43736 FBtr0345898|FBtr0330265|FBtr0330268|FBtr0330263|FBtr0330264 6878698|6878698|6878698|6878698|6878698 6881580|6880502|6881580|6880429|6880095 GATCTC 6mer2-7 dme-bantam-3p X + 6878965 6879063 3'utr CG43736 FlyBase G44982.1 CGCCACCGCCAGCTCCGGCAGTTCCAGCCACACCACCCGGAGCGGGAACCATTGGATCTCCTGCACTATCAGCAACACCTGTACACACCACCAGCAACA 43 6879026 0.950015205 7 42 182 0.985294118 1.826074803 0.25 0.348837209 0.588235294 43 1 0 67 X:6878965-6879063 6 43.5 1062 FBgn0263993 1284.363333 32.20666667 49.73 0.033868921 1.350652039 0.874723507 2 -7 -2.5 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 8mer-A1 CTGTGATA X 7106767 7106774 - X_7106767_7106774_- 0.626796924 0.627900565 0.627348744 0.000780434 fz4 FBtr0071018|FBtr0071018|FBtr0071018|FBtr0071017|FBtr0071017|FBtr0071017 7106270|7106270|7106270|7106270|7106270|7106270 7107380|7107380|7107380|7107380|7107380|7107380 X - 7106737 7106793 3'utr fz4 FlyBase G65365.1 AACGCGCAGCAACCAAATACTGTGATACGCATGTTCATGTCTTCAAAAACAAAAAAA 70 7106776 0.954505714 6 66 265 0.939759036 1.892094603 0.301204819 0.171428571 0.301204819 70 5 0 78 X:7106737-7106793 8 fz4 FBtr0071018|FBtr0071018|FBtr0071018|FBtr0071017|FBtr0071017|FBtr0071017 7106270|7106270|7106270|7106270|7106270|7106270 7107380|7107380|7107380|7107380|7107380|7107380 CTGTGATA 8mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 7106755 7106798 3'utr fz4 FlyBase G49225.1 AGAGAAACGCGCAGCAACCAAATACTGTGATACGCATGTTCATG 33 7106776 0.929823187 3 28 104 0.847457627 1.22184875 0.271186441 0.484848485 0.711864407 33 7 2 50 X:7106755-7106798 8 50 1063 FBgn0027342 197.34 6.033333333 9.256666667 0.253369819 8.287292818 5.401512423 2 2 2 0.5 dme-miR-33-5p 7mer-m8 CAATGCA X 7281196 7281202 - X_7281196_7281202_- 0.632743099 0.614459182 0.623601141 0.01292867 CG1677 FBtr0303415|FBtr0339819|FBtr0089712|FBtr0339820 7281087|7281087|7281087|7281087 7281438|7281438|7281438|7281438 X - 7281180 7281262 3'utr CG1677 FlyBase G65370.1 ATTCGCATCGTATTCGATATTGCCTTCGCCTGGGTGCAGCCGCTCGATCGCCATACAATTCAATGCATTTAGATTTAATAATC 53 7281203 0.990099778 12 50 506 0.948275862 1.740362689 0.103448276 0.094339623 0.172413793 53 3 0 55 X:7281180-7281262 7 CG1677 FBtr0089712|FBtr0339820|FBtr0303415|FBtr0339819 7281087|7281087|7281087|7281087 7281438|7281438|7281438|7281438 CAATGCA 7mer-m8 dme-miR-33-5p X - 7281133 7281248 3'utr CG1677 FlyBase G49232.1 CGATATTGCCTTCGCCTGGGTGCAGCCGCTCGATCGCCATACAATTCAATGCATTTAGATTTAATAATCATTATCCATTTTCCTACCCTGACTATTGCCAACTGAAGAGCATCAAT 51 7281195 0.985175751 15 38 397 0.784615385 1.707570176 0.138461538 0.254901961 0.415384615 51 14 0 51 X:7281133-7281248 7 37 1064 FBgn0029941 1454.373333 48.72333333 74.88666667 0.02544051 0.759389752 0.494079943 1 -7 -3 0.5 dme-bantam-3p 7mer-m8 TGATCTC X 7288893 7288899 - X_7288893_7288899_- 0.64619467 0.652646237 0.649420453 0.004561899 unc-119 FBtr0071066|FBtr0346619 7288678|7288365 7289145|7289145 X - 7288868 7288978 5'utr unc-119 FlyBase G65393.2 ATATTATCACAGCCATTTTAGCCTTAGCACACCAAAGTTTTACCCACCATTCCTGTTTGATGTATTTAGCATCAAGATATGATCTCCTGCAAACGGAAACTAACACACAAA 384 7288899 0.97740174 9 374 2174 0.975 2.369215857 0.05625 0.203125 0.3625 384 11 1 468 X:7288868-7288978 7 unc-119 FBtr0346619|FBtr0071066 7288365|7288678 7289145|7289145 TGATCTC 7mer-m8 dme-bantam-3p X - 7288873 7288946 5'utr unc-119 FlyBase G49250.2 CAAAGTTTTACCCACCATTCCTGTTTGATGTATTTAGCATCAAGATATGATCTCCTGCAAACGGAAACTAACAC 284 7288891 0.848882889 10 278 1575 0.972850679 2.633468456 0.076923077 0.383802817 0.604072398 284 12 0 430 X:7288873-7288946 7 327.5 1065 FBgn0025549 924.56 49.97333333 77.10666667 0.354222549 6.553495197 4.24736296 0 -8 -4 0.5 dme-miR-184-3p 7mer-m8 TCCGTCC X 7328400 7328406 + X_7328400_7328406_+ 0.659106935 0.546101795 0.602604365 0.079906673 Dok FBtr0071049 7327562 7328806 X + 7328359 7328417 3'utr Dok FlyBase G59525.1 CTAGATTTTAAATACACTGCAATTGTACTTGTTTCCGTTTATCCGTCCGTCTTCTCAAG 7 7328398 0.994434312 6 6 78 0.857142857 0.77815125 0.142857143 0 0 7 1 0 6 X:7328359-7328417 7 Dok FBtr0071049 7327562 7328806 TCCGTCC 7mer-m8 dme-miR-184-3p X + 7328360 7328435 3'utr Dok FlyBase G45011.1 TAGATTTTAAATACACTGCAATTGTACTTGTTTCCGTTTATCCGTCCGTCTTCTCAAGGTTTTGATGCCATATAAA 15 7328390 0.969826645 10 14 145 0.947368421 1.255272505 0 0.266666667 0.421052632 15 1 0 18 X:7328360-7328435 7 6 1066 FBgn0029944 523.09 18.16 27.87 0.011470301 0.330396476 0.215285253 2 10 6 0.5 dme-miR-14-3p 7mer-m8 AAGACTG X 7675081 7675087 + X_7675081_7675087_+ 0.607735062 0.621004879 0.614369971 0.009383166 ct FBtr0305134|FBtr0114613|FBtr0331733|FBtr0071068 7674616|7674616|7674616|7674616 7678259|7678259|7678859|7678259 X + 7675061 7675114 3'utr ct FlyBase G59558.1 TTTCGATTTGTTTCTACTTGAAGACTGTAAGCAAAGGCGGTAGGATTGATAACT 27 7675079 0.755817829 9 23 177 0.862068966 1.397940009 0.344827586 0.037037037 0.103448276 27 4 0 25 X:7675061-7675114 7 ct FBtr0331733|FBtr0071068|FBtr0305134|FBtr0114613 7674616|7674616|7674616|7674616 7678859|7678259|7678259|7678259 AAGACTG 7mer-m8 dme-miR-14-3p X + 7675064 7675101 3'utr ct FlyBase G45028.1 CGATTTGTTTCTACTTGAAGACTGTAAGCAAAGGCGGT 13 7675078 0.965829158 6 12 81 0.947368421 1.255272505 0.368421053 0.307692308 0.526315789 13 1 0 18 X:7675064-7675101 7 18.5 1067 FBgn0004198 1981.64 22.68666667 34.95666667 0.009335702 0.81545695 0.529226662 2 3 2.5 0.5 dme-bantam-3p 8mer-A1 TGATCTCA X 7675334 7675341 + X_7675334_7675341_+ 0.605844827 0.613911052 0.60987794 0.005703735 ct FBtr0305134|FBtr0114613|FBtr0331733|FBtr0071068 7674616|7674616|7674616|7674616 7678259|7678259|7678859|7678259 X + 7675308 7675352 3'utr ct FlyBase G59559.1 AGCAACCGACTTGTTTAACTATCTTTTGATCTCAAGCAAAAAAAC 101 7675333 0.671724459 7 94 893 0.920634921 1.462397998 0.079365079 0.207920792 0.365079365 101 7 3 116 X:7675308-7675352 8 ct FBtr0331733|FBtr0071068|FBtr0305134|FBtr0114613 7674616|7674616|7674616|7674616 7678859|7678259|7678259|7678259 TGATCTCA 8mer-A1 dme-bantam-3p X + 7675307 7675354 3'utr ct FlyBase G45029.1 CAGCAACCGACTTGTTTAACTATCTTTTGATCTCAAGCAAAAAAACAA 64 7675333 0.97423803 8 60 507 0.944444444 1.62838893 0.033333333 0.34375 0.533333333 64 4 1 85 X:7675307-7675354 8 80 1068 FBgn0004198 1981.64 22.68666667 34.95666667 0.040370602 3.526300323 2.288547726 1 1 1 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 6mer3-8 CTGTGA X 7685585 7685590 - X_7685585_7685590_- 0.98358685 0.850868126 0.917227488 0.093846293 CHES-1-like FBtr0112946|FBtr0112946|FBtr0112946|FBtr0071079|FBtr0071079|FBtr0071079|FBtr0310287|FBtr0310287|FBtr0310287|FBtr0333203|FBtr0333203|FBtr0333203 7683456|7683456|7683456|7684885|7684885|7684885|7682336|7682336|7682336|7683456|7683456|7683456 7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914 X - 7685564 7685602 3'utr CHES-1-like FlyBase G65419.1 AGGATTTTTTTTCTGTGACTTTACTGTGCCCCGCAATTA 7 7685592 0.99353295 5 7 78 1 1 0.2 0.428571429 0.6 7 0 0 10 X:7685564-7685602 6 CHES-1-like FBtr0310287|FBtr0310287|FBtr0310287|FBtr0333203|FBtr0333203|FBtr0333203|FBtr0112946|FBtr0112946|FBtr0112946|FBtr0071079|FBtr0071079|FBtr0071079 7682336|7682336|7682336|7683456|7683456|7683456|7683456|7683456|7683456|7684885|7684885|7684885 7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914|7685914 CTGTGA 6mer3-8 "dme-miR-2a-3p,dme-miR-2b-3p" X - 7685564 7685605 3'utr CHES-1-like FlyBase G49269.1 TTTAGGATTTTTTTTCTGTGACTTTACTGTGCCCCGCAATTA 13 7685592 0.982777924 6 11 136 1 1.278753601 0.210526316 0.307692308 0.526315789 13 0 0 19 X:7685564-7685605 6 9 1069 FBgn0029504 1761.533333 36.18333333 55.28333333 0.005109185 0.248733303 0.162797709 2 2 2 0.5 dme-miR-2a-2-5p 6mer3-8 TGATGA X 7921540 7921545 + X_7921540_7921545_+ 0.725455417 0.779402825 0.752429121 0.038146572 Ykt6 FBtr0071093 7921363 7921966 X + 7921513 7921557 3'utr Ykt6 FlyBase G59657.1 TCCAAGGGAGCGGTGCGACTTGGGCTTTGATGATTGCTTTTTATA 9 7921553 0.986336974 6 9 81 1 0.954242509 0.111111111 0 0 9 0 0 9 X:7921513-7921557 6 Ykt6 FBtr0071093 7921363 7921966 TGATGA 6mer3-8 dme-miR-2a-2-5p X + 7921502 7921564 3'utr Ykt6 FlyBase G45102.1 ACCAAACAAACTCCAAGGGAGCGGTGCGACTTGGGCTTTGATGATTGCTTTTTATAAATGAAT 11 7921533 0.984549538 6 10 82 1 1.255272505 0.111111111 0.454545455 0.666666667 11 0 0 18 X:7921502-7921564 6 5.5 1070 FBgn0260858 601.62 50.32 77.46 0.009141983 0.109300477 0.071004389 -13 7 -3 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 7924519 7924525 - X_7924519_7924525_- 0.631970597 0.640952332 0.636461464 0.006351021 CG10777 FBtr0344137|FBtr0344137|FBtr0344137|FBtr0071132|FBtr0071132|FBtr0071132 7924137|7924137|7924137|7922156|7922156|7922156 7927227|7927227|7927227|7927227|7927227|7927227 X - 7924489 7924558 3'utr CG10777 FlyBase G65468.1 AATTATGATTTTGATGCAACCGAATTGTGATGATGTGATAGACTTATATAAACAAACGAAAATACAAAAA 364 7924520 0.807271543 10 345 2483 0.943478261 1.407040808 0.519565217 0.197802198 0.365217391 364 10 16 434 X:7924489-7924558 7 CG10777 FBtr0071132|FBtr0071132|FBtr0071132|FBtr0344137|FBtr0344137|FBtr0344137 7922156|7922156|7922156|7924137|7924137|7924137 7927227|7927227|7927227|7927227|7927227|7927227 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X - 7924488 7924554 3'utr CG10777 FlyBase G49303.1 ATGATTTTGATGCAACCGAATTGTGATGATGTGATAGACTTATATAAACAAACGAAAATACAAAAAT 291 7924520 0.979076325 10 287 1966 0.981351981 2.3232521 0.524475524 0.374570447 0.575757576 291 7 1 421 X:7924488-7924554 7 325 1071 FBgn0029979 3423.163333 51.95333333 79.74333333 0.094941424 6.255614013 4.075575806 -5 -5 -5 0.5 dme-miR-980-3p 7mer-m8 GGCAGCT X 7925176 7925182 - X_7925176_7925182_- 0.540223656 0.534990835 0.537607246 0.003700219 CG10777 FBtr0344137|FBtr0071132 7924137|7922156 7927227|7927227 X - 7925147 7925210 3'utr CG10777 FlyBase G65472.1 GAGTAAATTAGTAGTAGTAACATTAATTGGCAGCTCCAGTCATATAGTTAGCAGTAATATATCC 750 7925184 0.821555035 10 731 5949 0.972619048 2.213252052 0.082142857 0.106666667 0.202380952 750 19 4 817 X:7925147-7925210 7 CG10777 FBtr0071132|FBtr0344137 7922156|7924137 7927227|7927227 GGCAGCT 7mer-m8 dme-miR-980-3p X - 7925119 7925210 3'utr CG10777 FlyBase G49308.1 GAGTAAATTAGTAGTAGTAACATTAATTGGCAGCTCCAGTCATATAGTTAGCAGTAATATATCCATATATCGTCTGTTCAAGCAGTTGTCCA 547 7925184 0.983931593 11 536 4195 0.978773585 2.317018101 0.091981132 0.402193784 0.614386792 547 15 3 830 X:7925119-7925210 7 639 1072 FBgn0029979 3423.163333 51.95333333 79.74333333 0.186669445 12.29949955 8.013209046 2 2 2 0.5 dme-miR-317-3p 7mer-m8 TGTGTTC X 7926874 7926880 - X_7926874_7926880_- 0.442536601 0.57577884 0.50915772 0.094216463 CG10777 FBtr0344137|FBtr0071132 7924137|7922156 7927227|7927227 X - 7926853 7926946 5'utr CG10777 FlyBase G65475.1 ACCAAAATCGTTGCCTTTTTGTTTCTATATTTATTCACACCTCACTACTAATATTAGTAGAACATTTGTGTTCTCTTTCGCTTATTTAAGCATT 18 7926881 0.92980884 7 18 193 1 1.380211242 0 0.333333333 0.5 18 0 0 24 X:7926853-7926946 7 CG10777 FBtr0071132|FBtr0344137 7922156|7924137 7927227|7927227 TGTGTTC 7mer-m8 dme-miR-317-3p X - 7926857 7926893 5'utr CG10777 FlyBase G49309.1 TTAGTAGAACATTTGTGTTCTCTTTCGCTTATTTAAG 6 7926881 0.983584543 3 6 64 1 0.954242509 0.111111111 0.333333333 0.555555556 6 0 0 9 X:7926857-7926893 7 9.5 1073 FBgn0029979 3423.163333 51.95333333 79.74333333 0.002775211 0.18285641 0.119132216 1 1 1 0.5 "dme-miR-9b-5p,dme-miR-9c-5p" 6mer2-7 CCAAAG X 8040319 8040324 - X_8040319_8040324_- 0.548036075 0.610073471 0.579054773 0.043867066 fs(1)h FBtr0071119|FBtr0333307 8038789|8037806 8040978|8040978 X - 8040256 8040469 3'utr fs(1)h FlyBase G65547.1 AAAAAAAATGGCAAATTTCCTTCGGTTAGCAAATGATTCTTCGCAATTTTTTTAAAAATCACTTACCATCTCGCTTATTATTTTGTATTAAAATTACGATTATGATGATAATGGATCGTGGCGACAAAGATGTCCGCACATGTTTCCAAAGCTTATTATTTTTAATATTATTGATTGCCTAGGCAAGTTTAGTTCGTAGGTATACACTTAATTG 59 8040327 0.854125527 29 55 523 0.893333333 1.826074803 0.253333333 0.220338983 0.386666667 59 8 0 67 X:8040256-8040469 6 fs(1)h FBtr0333307|FBtr0071119 8037806|8038789 8040978|8040978 CCAAAG 6mer2-7 "dme-miR-9b-5p,dme-miR-9c-5p" X - 8040303 8040339 3'utr fs(1)h FlyBase G49359.2 TGTCCGCACATGTTTCCAAAGCTTATTATTTTTAATA 10 8040327 0.670952118 3 8 100 0.823529412 1.146128036 0 0.5 0.705882353 10 3 0 14 X:8040303-8040339 6 11 1074 FBgn0004656 6894.06 89.92333333 138.4833333 0.001595576 0.122326426 0.079431941 3 3 3 0.5 dme-miR-2a-2-5p 6mer3-8 TGATGA X 8040362 8040367 - X_8040362_8040367_- 0.990058243 0.941456579 0.965757411 0.034366521 fs(1)h FBtr0071119|FBtr0333307 8038789|8037806 8040978|8040978 X - 8040256 8040469 3'utr fs(1)h FlyBase G65547.1 AAAAAAAATGGCAAATTTCCTTCGGTTAGCAAATGATTCTTCGCAATTTTTTTAAAAATCACTTACCATCTCGCTTATTATTTTGTATTAAAATTACGATTATGATGATAATGGATCGTGGCGACAAAGATGTCCGCACATGTTTCCAAAGCTTATTATTTTTAATATTATTGATTGCCTAGGCAAGTTTAGTTCGTAGGTATACACTTAATTG 59 8040366 0.854125527 29 55 523 0.893333333 1.826074803 0.253333333 0.220338983 0.386666667 59 8 0 67 X:8040256-8040469 6 fs(1)h FBtr0333307|FBtr0071119 8037806|8038789 8040978|8040978 TGATGA 6mer3-8 dme-miR-2a-2-5p X - 8040342 8040369 3'utr fs(1)h FlyBase G49360.1 TATGATGATAATGGATCGTGGCGACAAA 8 8040360 0.600155971 4 8 37 1 0.954242509 0.222222222 0.125 0.222222222 8 0 0 9 X:8040342-8040369 6 11.5 1075 FBgn0004656 6894.06 89.92333333 138.4833333 0.001668103 0.127886718 0.083042484 -1 -7 -4 0.5 "dme-miR-996-3p,dme-miR-279-3p" 7mer-m8 TCTAGTC X 8047748 8047754 - X_8047748_8047754_- 0.480454479 0.464556775 0.472505627 0.011241371 fs(1)h FBtr0333309|FBtr0333308|FBtr0071118|FBtr0071120|FBtr0071121|FBtr0071122 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 X - 8047694 8047777 3'utr fs(1)h FlyBase G65563.1 TCTGTGCCAATTTCACATGTTTTTCTAGTCCTGTTTCTTGATAATTCAAATGTGTTAATCCAAGCTCCATTGTGACGATCCCTA 40 8047755 0.902335445 6 39 459 1 1.681241237 0.0625 0.125 0.270833333 40 0 0 48 X:8047694-8047777 7 fs(1)h FBtr0071121|FBtr0071122|FBtr0071120|FBtr0071118|FBtr0333309|FBtr0333308 8045434|8045434|8045434|8045434|8045434|8045434 8050146|8050146|8050146|8050146|8050146|8050146 TCTAGTC 7mer-m8 "dme-miR-996-3p,dme-miR-279-3p" X - 8047736 8047769 3'utr fs(1)h FlyBase G49371.1 AATTTCACATGTTTTTCTAGTCCTGTTTCTTGAT 31 8047755 0.691819958 6 31 369 1 1.681241237 0.041666667 0.419354839 0.625 31 0 0 48 X:8047736-8047769 7 33 1076 FBgn0004656 6894.06 89.92333333 138.4833333 0.004786729 0.366979279 0.238295824 1 1 1 0.5 dme-miR-34-5p 7mer-A1 ACTGCCA X 8069173 8069179 + X_8069173_8069179_+ 0.504173563 0.716104727 0.610139145 0.149857918 mys FBtr0340135|FBtr0340137|FBtr0071105|FBtr0340136 8068934|8068934|8068934|8068934 8070237|8070237|8070237|8070237 X + 8069129 8069211 3'utr mys FlyBase G59706.1 CATCGACGAAGCTGCTTTGCCCGGGTGCAAAACCACTGAAGTCAACTGCCATTGAAACGCGTTCTAAACTAAGTCAGCCCTAT 68 8069180 0.844709416 8 68 285 1 1.986771734 0.195876289 0.294117647 0.505154639 68 0 0 97 X:8069129-8069211 7 mys FBtr0071105|FBtr0340136|FBtr0340135|FBtr0340137 8068934|8068934|8068934|8068934 8070237|8070237|8070237|8070237 ACTGCCA 7mer-A1 dme-miR-34-5p X + 8069133 8069209 3'utr mys FlyBase G45139.1 GACGAAGCTGCTTTGCCCGGGTGCAAAACCACTGAAGTCAACTGCCATTGAAACGCGTTCTAAACTAAGTCAGCCCT 63 8069180 0.949332646 11 62 269 0.990196078 2.004321374 0.264705882 0.428571429 0.647058824 63 1 0 101 X:8069133-8069209 7 60 1077 FBgn0004657 3546.84 102.2566667 157.0266667 0.016916466 0.58675881 0.382100705 -7 -7 -7 0.5 dme-miR-14-3p 7mer-m8 AAGACTG X 8408092 8408098 - X_8408092_8408098_- 0.408737019 0.402499683 0.405618351 0.004410437 lawc FBtr0071248|FBtr0302081|FBtr0307287|FBtr0307286 8408006|8408006|8408006|8408006 8409752|8409752|8409752|8409752 X - 8408069 8408308 3'utr lawc FlyBase G65739.1 AATAATTTCAAGGAGAAGATGTTTTTGTGGTCAAAAACGTGCAGATGACTTCTAAGAAGTTGGAAAATCATGTATTTACTCGGAAAGAAGCCAGAACTGAAGTAGCATACTTATTAGTATTATCAAATGATGAGTTTTTTCATCATAGTTTTAGTTCTATATTTATAGAAAAAAAAAACTTTCCTTGTTACTTTTAGTTTTTTCATTTGAAAGACTGCCGTTGACTTTTTCATTTTATTC 59 8408103 0.982688276 23 56 436 0.938461538 1.785329835 0.092307692 0.101694915 0.184615385 59 4 0 61 X:8408069-8408308 7 lawc FBtr0071248|FBtr0302081|FBtr0307287|FBtr0307286 8408006|8408006|8408006|8408006 8409752|8409752|8409752|8409752 AAGACTG 7mer-m8 dme-miR-14-3p X - 8408078 8408146 3'utr lawc FlyBase G49499.1 TTATAGAAAAAAAAAACTTTCCTTGTTACTTTTAGTTTTTTCATTTGAAAGACTGCCGTTGACTTTTTC 30 8408103 0.728668305 14 29 265 0.979591837 1.681241237 0.040816327 0.466666667 0.673469388 30 1 0 48 X:8408078-8408146 7 27 1078 FBgn0262976 211.98 11.61333333 17.8 0.127370507 2.324913892 1.516853933 5 5 5 0.5 dme-miR-14-3p 7mer-m8 AAGACTG X 8431992 8431998 + X_8431992_8431998_+ 0.656953313 0.537577911 0.597265612 0.084411155 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 X + 8431959 8432106 3'utr Trf2 FlyBase G59829.1 CAAATAGCATAATTCTGTTTTTGTTTTGCCGTAAAGACTGCATTATACCAACAATTAATTATATACAAACATAATAAATAATTAACTGATAAATGGGGCGAGTAAGCTTTGCAACTAAGCTGAGAACAAAACGGATGGATAAACATTT 73 8432001 0.981840352 17 71 510 0.965116279 1.919078092 0.023255814 0.164383562 0.290697674 73 3 0 83 X:8431959-8432106 7 Trf2 FBtr0300577|FBtr0330106 8429114|8429114 8433011|8433011 AAGACTG 7mer-m8 dme-miR-14-3p X + 8431961 8432014 3'utr Trf2 FlyBase G45229.1 AATAGCATAATTCTGTTTTTGTTTTGCCGTAAAGACTGCATTATACCAACAATT 42 8432001 0.970298474 12 41 314 0.982758621 1.755874856 0 0.30952381 0.5 42 1 0 57 X:8431961-8432014 7 51 1079 FBgn0261793 2407.63 30.94 47.70333333 0.021182657 1.648351648 1.069107679 -9 -9 -9 0.5 dme-miR-263a-5p 7mer-A1 TGCCATA X 8567613 8567619 + X_8567613_8567619_+ 0.527717808 0.62122149 0.574469649 0.0661171 Trf4-1 FBtr0112964|FBtr0331725 8566937|8566937 8570159|8570159 X + 8567583 8567624 3'utr Trf4-1 FlyBase G59860.1 CGTAACTAATTCCCTATCCACCCCATTTCCTGCCATACAAAA 24 8567609 0.722021287 3 24 138 1 1.531478917 0 0.375 0.558823529 24 0 0 34 X:8567583-8567624 7 Trf4-1 FBtr0331725|FBtr0112964 8566937|8566937 8570159|8570159 TGCCATA 7mer-A1 dme-miR-263a-5p X + 8567581 8567631 3'utr Trf4-1 FlyBase G45249.1 AACGTAACTAATTCCCTATCCACCCCATTTCCTGCCATACAAAAAAAAAAA 13 8567609 0.964592749 4 13 68 1 1.255272505 0 0.307692308 0.5 13 0 0 18 X:8567581-8567631 7 17.5 1080 FBgn0030049 670.8133333 17.65 27.06666667 0.026087734 0.991501416 0.646551724 4 4 4 0.5 dme-miR-34-5p 7mer-m8 CACTGCC X 8591062 8591068 - X_8591062_8591068_- 0.515594457 0.653537979 0.584566218 0.097540784 CG12659 FBtr0332627 8590773 8591302 X - 8590979 8591089 3'utr CG12659 FlyBase G65774.1 ATATATATATATATATGCATACACTGCCTAAAAGGAGATGATCTCTGTAAATTAGTTATAGAGATTTGTCACTAGTTTGACCGCAAAAATAGATTAGGTAATTCCAAGGTG 54 8591051 0.985209668 9 52 420 0.966666667 1.286306739 0.05 0.092592593 0.183333333 54 0 2 58 X:8590979-8591089 7 CG12659 FBtr0332627 8590773 8591302 CACTGCC 7mer-m8 dme-miR-34-5p X - 8591024 8591095 3'utr CG12659 FlyBase G49523.1 ATTACCATATATATATATATATGCATACACTGCCTAAAAGGAGATGATCTCTGTAAATTAGTTATAGAGATT 32 8591044 0.793825522 9 30 240 0.906976744 1.591064607 0.046511628 0.15625 0.372093023 32 4 0 39 X:8591024-8591095 7 22 1081 FBgn0040929 86.03333333 12.17 18.70333333 0.255714839 1.807723911 1.176260916 -17 -24 -20.5 0.5 dme-miR-277-3p 7mer-m8 TGCATTT X 8873294 8873300 - X_8873294_8873300_- 0.488729249 0.466165983 0.477447616 0.015954592 Moe FBtr0331601|FBtr0071269|FBtr0308193|FBtr0071274 8873010|8873010|8873010|8873010 8873946|8873946|8873946|8873946 X - 8873257 8873322 3'utr Moe FlyBase G65821.1 TACAACAAAACAAACAACTATTTGCATTTTCCCCCGTTATAATTATTATTTTTATTATTATATAAT 85 8873301 0.984996478 6 81 669 0.971153846 2.004321374 0 0.188235294 0.336538462 85 3 0 101 X:8873257-8873322 7 Moe FBtr0308193|FBtr0071274|FBtr0331601|FBtr0071269 8873010|8873010|8873010|8873010 8873946|8873946|8873946|8873946 TGCATTT 7mer-m8 dme-miR-277-3p X - 8873276 8873315 3'utr Moe FlyBase G49552.1 AAACAAACAACTATTTGCATTTTCCCCCGTTATAATTATT 50 8873301 0.70646742 4 48 401 0.971428571 1.531478917 0 0.34 0.528571429 50 1 1 68 X:8873276-8873315 7 65.5 1082 FBgn0011661 40921.94667 1697.71 2611.596667 0.001600608 0.038581383 0.025080442 1 1 1 0.5 dme-miR-307a-3p 8mer-A1 GGTTGTGA X 8898980 8898987 - X_8898980_8898987_- 0.652896215 0.644538694 0.648717454 0.005909645 CG1885 FBtr0333606 8898552 8899226 X - 8898956 8899006 3'utr CG1885 FlyBase G65841.1 GTAGAAAATTTCGAGCTTTGGTTGTGATTCGATTCGATTGATTAGTTATCT 58 8898988 0.708201864 8 57 580 0.986111111 1.851258349 0.277777778 0.206896552 0.361111111 58 1 0 71 X:8898956-8899006 8 CG1885 FBtr0333606 8898552 8899226 GGTTGTGA 8mer-A1 dme-miR-307a-3p X - 8898952 8899007 3'utr CG1885 FlyBase G49569.1 TGTAGAAAATTTCGAGCTTTGGTTGTGATTCGATTCGATTGATTAGTTATCTTTAT 37 8898988 0.960006183 7 35 361 0.9375 1.352182518 0.208333333 0.297297297 0.458333333 37 2 1 45 X:8898952-8899007 8 47 1083 FBgn0030066 139.3333333 11.45 17.55333333 0.337320574 4.104803493 2.677554121 1 1 1 0.5 dme-miR-965-3p 7mer-A1 ACGCTTA X 8903415 8903421 + X_8903415_8903421_+ 0.542165252 0.54639399 0.544279621 0.002990142 Rbm13 FBtr0346163|FBtr0071255 8903356|8903356 8903761|8903464 X + 8903403 8903441 3'utr Rbm13 FlyBase G59960.1 ACTTAGCTGTTAACGCTTATTGTTTAGCCGGTTAAGAAT 14 8903422 0.655924092 5 13 135 0.944444444 1.230448921 0.333333333 0.214285714 0.388888889 14 1 0 17 X:8903403-8903441 7 Rbm13 FBtr0071255|FBtr0346163 8903356|8903356 8903464|8903761 ACGCTTA 7mer-A1 dme-miR-965-3p X + 8903403 8903439 3'utr Rbm13 FlyBase G45332.1 ACTTAGCTGTTAACGCTTATTGTTTAGCCGGTTAAGA 12 8903423 0.616219647 5 11 110 0.875 1.146128036 0.25 0.25 0.4375 12 2 0 14 X:8903403-8903439 7 12.5 1084 FBgn0030067 1128.99 111.6733333 171.8733333 0.011071843 0.111933616 0.072727978 -7 -8 -7.5 0.5 "dme-miR-2a-3p,dme-miR-2b-3p" 7mer-A1 TGTGATA X 9085739 9085745 + X_9085739_9085745_+ 0.615724956 0.680495093 0.648110025 0.045799377 APC4 FBtr0071285|FBtr0071285|FBtr0071285|FBtr0309872|FBtr0309872|FBtr0309872 9085700|9085700|9085700|9085700|9085700|9085700 9085867|9085867|9085867|9085867|9085867|9085867 X + 9085728 9085750 3'utr APC4 FlyBase G59975.1 ATTGATTGTTGTGTGATAACTTA 9 9085736 0.697389284 3 8 82 0.9375 0.875061263 0 0.444444444 0.6875 9 0 1 15 X:9085728-9085750 7 APC4 FBtr0071285|FBtr0071285|FBtr0071285|FBtr0309872|FBtr0309872|FBtr0309872 9085700|9085700|9085700|9085700|9085700|9085700 9085867|9085867|9085867|9085867|9085867|9085867 TGTGATA 7mer-A1 "dme-miR-2a-3p,dme-miR-2b-3p" X + 9085727 9085751 3'utr APC4 FlyBase G45344.1 TATTGATTGTTGTGTGATAACTTAA 9 9085737 0.660400306 4 9 81 1 1.176091259 0 0.555555556 0.733333333 9 0 0 15 X:9085727-9085751 7 9 1085 FBgn0052707 194.3333333 9.046666667 13.88 0.046312178 0.994841562 0.648414986 3 2 2.5 0.5 dme-bantam-3p 7mer-m8 TGATCTC X 9171625 9171631 + X_9171625_9171631_+ 0.634580176 0.633886355 0.634233265 0.000490591 mei-P26 FBtr0333474|FBtr0333473|FBtr0333475 9170814|9170814|9170814 9189309|9189309|9175190 X + 9171581 9171657 3'utr mei-P26 FlyBase G60057.1 AAACCAATAACAGATGATAAACAAAATGCAACAAATACTATTTTTGATCTCTAATTTAAAAACAATTAGCGCTACTA 115 9171624 0.99202655 14 111 1231 0.965034965 1.838849091 0 0.2 0.356643357 115 4 1 138 X:9171581-9171657 7 mei-P26 FBtr0071303|FBtr0340341|FBtr0333475|FBtr0333473|FBtr0333474 9170814|9170814|9170814|9170814|9170814 9171659|9171659|9175190|9189309|9189309 TGATCTC 7mer-m8 dme-bantam-3p X + 9171604 9171643 3'utr mei-P26 FlyBase G45407.1 AAATGCAACAAATACTATTTTTGATCTCTAATTTAAAAAC 79 9171623 0.618583064 11 76 862 0.963636364 2.025305865 0 0.316455696 0.509090909 79 4 0 106 X:9171604-9171643 7 95 1086 FBgn0026206 3669.783333 46.77 72.34333333 0.025887087 2.031216592 1.313182509 1 2 1.5 0.5 dme-miR-282-5p 7mer-A1 GAGGCTA X 9173864 9173870 + X_9173864_9173870_+ 0.664588438 0.674879594 0.669734016 0.007276977 mei-P26 FBtr0333474|FBtr0333473|FBtr0333475 9170814|9170814|9170814 9189309|9189309|9175190 X + 9173778 9173877 3'utr mei-P26 FlyBase G60070.1 ACCATCATTTACTATTGTCATTATTATTAATTATTATTAATTATTATTATTATTATTATTGTTTAGTTTTTACGTTGTTACATTGTGAGGCTACACACAA 29 9173863 0.985569042 9 28 256 0.96875 1.190331698 0.0625 0.103448276 0.1875 29 0 1 31 X:9173778-9173877 7 mei-P26 FBtr0333475|FBtr0333473|FBtr0333474 9170814|9170814|9170814 9175190|9189309|9189309 GAGGCTA 7mer-A1 dme-miR-282-5p X + 9173834 9173882 3'utr mei-P26 FlyBase G45419.1 TATTGTTTAGTTTTTACGTTGTTACATTGTGAGGCTACACACAATTCTG 23 9173862 0.979367917 4 23 170 1 1.579783597 0.105263158 0.434782609 0.657894737 23 0 0 38 X:9173834-9173882 7 20.5 1087 FBgn0026206 3669.783333 46.77 72.34333333 0.005586161 0.438315159 0.283370963 1 2 1.5 0.5 dme-miR-252-5p 7mer-m8 GTACTTA X 9258459 9258465 + X_9258459_9258465_+ 0.405452242 0.35412907 0.379790656 0.036290912 ric8a FBtr0346166|FBtr0071317 9258082|9258082 9259202|9258670 X + 9258436 9258479 3'utr ric8a FlyBase G60126.1 AACCATTAACCATGTAGAACGTTGTACTTATTAAGTTATTACGC 12 9258458 0.97863072 3 12 125 1 1.113943352 0 0.083333333 0.153846154 12 0 0 13 X:9258436-9258479 7 ric8a FBtr0071317|FBtr0346166 9258082|9258082 9258670|9259202 GTACTTA 7mer-m8 dme-miR-252-5p X + 9258441 9258475 3'utr ric8a FlyBase G45459.1 TTAACCATGTAGAACGTTGTACTTATTAAGTTATT 7 9258458 0.80285385 3 7 70 1 1 0 0.285714286 0.5 7 0 0 10 X:9258441-9258475 7 9.5 1088 FBgn0028292 451.68 19.07666667 29.28333333 0.021032589 0.497990564 0.324416619 1 1 1 0.5 dme-miR-34-5p 7mer-A1 ACTGCCA X 9358432 9358438 + X_9358432_9358438_+ 0.632555603 0.607823998 0.6201898 0.017487882 BCL7-like FBtr0071358 9357680 9358594 X + 9358376 9358454 3'utr BCL7-like FlyBase G60146.1 AACCAGTAAACCTCTTTATAGTACACTTACCAACATAAATGTGACATTAACATTTAACTGCCAGCAGGGCGCGAAAAAT 27 9358429 0.701607745 7 24 148 0.939393939 1.190331698 0.272727273 0.148148148 0.303030303 27 1 1 31 X:9358376-9358454 7 BCL7-like FBtr0071358 9357680 9358594 ACTGCCA 7mer-A1 dme-miR-34-5p X + 9358380 9358474 3'utr BCL7-like FlyBase G45474.1 AGTAAACCTCTTTATAGTACACTTACCAACATAAATGTGACATTAACATTTAACTGCCAGCAGGGCGCGAAAAATATGCAAATGTTCGCTGAAGA 15 9358429 0.969032796 6 14 84 1 1.431363764 0.444444444 0.466666667 0.703703704 15 0 0 27 X:9358380-9358474 7 15.5 1089 FBgn0026149 221.2233333 16.18333333 24.75 0.070064942 0.957775489 0.626262626 3 3 3 0.5 dme-miR-282-5p 6mer2-7 GAGGCT X 939244 939249 + X_939244_939249_+ 0.722844636 0.795170501 0.759007568 0.051142134 CG32815 FBtr0307181|FBtr0345512 938011|938011 939424|939424 X + 939220 939259 3'utr CG32815 FlyBase G57881.1 TACAGAGTAAGTTACGCAAAGTATGAGGCTTGCATTTACA 13 939244 0.852187287 3 13 73 1 1.204119983 0 0.153846154 0.3125 13 0 0 16 X:939220-939259 6 CG32815 FBtr0345512|FBtr0307181 938011|938011 939424|939424 GAGGCT 6mer2-7 dme-miR-282-5p X + 939228 939254 3'utr CG32815 FlyBase G43788.1 AAGTTACGCAAAGTATGAGGCTTGCAT 5 939243 0.657457466 2 5 23 1 0.903089987 0 0.6 0.75 5 0 0 8 X:939228-939254 6 9 1090 FBgn0052815 22.11333333 0.906666667 1.36 0.406994272 9.926470588 6.617647059 0 1 0.5 0.5 dme-miR-79-3p 7mer-m8 TAGCTTT X 939309 939315 - X_939309_939315_- 0.372234709 0.573005672 0.47262019 0.141966536 CG3704 FBtr0070188 939168 939463 X - 939277 939368 3'utr CG3704 FlyBase G63941.1 GTGTGTTCGTCACTTGCACCTCCGATATTTGGTTTGTATATATGGACTTAGTTTAGCTTTGCAAATTAGTGATAACATATACATATGGAGGA 43 939303 0.924611062 12 41 418 0.98245614 1.748188027 0.140350877 0.186046512 0.385964912 43 1 0 56 X:939277-939368 7 CG3704 FBtr0070188 939168 939463 TAGCTTT 7mer-m8 dme-miR-79-3p X - 939255 939385 3'utr CG3704 FlyBase G48199.1 AAAACATTCAATATAGTGTGTGTTCGTCACTTGCACCTCCGATATTTGGTTTGTATATATGGACTTAGTTTAGCTTTGCAAATTAGTGATAACATATACATATGGAGGATATATCCCGCTCGTAAATGTAA 44 939303 0.98851116 16 43 391 0.983870968 1.785329835 0.209677419 0.295454545 0.5 44 1 0 61 X:939255-939385 7 29 1091 FBgn0040346 168.8866667 13.69666667 21.07 0.171712786 2.11730348 1.376364499 -12 -12 -12 0.5 dme-miR-965-3p 6mer2-7 ACGCTT X 9621751 9621756 + X_9621751_9621756_+ 0.940230998 0.892442464 0.916336731 0.033791572 CG42797 FBtr0332963|FBtr0303708|FBtr0303709|FBtr0303710 9621666|9621666|9621666|9621666 9622441|9622441|9622166|9623243 X + 9621732 9621775 5'utr CG42797 FlyBase G60189.1 ACACAAAACACGCGCCTAAACGCTTTATTTCGATTTTAGAAGTT 29 9621748 0.97936369 4 27 188 0.90625 1.462397998 0.1875 0.103448276 0.1875 29 3 0 29 X:9621732-9621775 6 CG42797 FBtr0303710|FBtr0303709|FBtr0303708|FBtr0332963 9621666|9621666|9621666|9621666 9623243|9622166|9622441|9622441 ACGCTT 6mer2-7 dme-miR-965-3p X + 9621728 9621767 5'utr CG42797 FlyBase G45501.1 AGATACACAAAACACGCGCCTAAACGCTTTATTTCGATTT 12 9621748 0.969116415 4 12 70 1 1.204119983 0 0.25 0.4375 12 0 0 16 X:9621728-9621767 6 20.5 1092 FBgn0261931 415.6266667 8.42 12.89333333 0.04932311 2.434679335 1.589968976 3 3 3